#chrom	start	stop	peakID	Z-score	strand	members_of_nearest_promoter_on_the_left	offset	promoter_strand	members_of_2nd_nearest_promoter_on_the_left	offset	promoter_strand	members_of_3rd_nearest_promoter_on_the_left	offset	promoter_strand	members_of_nearest_promoter_on_the_right	offset	promoter_strand	members_of_2nd_nearest_promoter_on_the_right	offset	promoter_strand	members_of_3rd_nearest_promoter_on_the_right	offset	promoter_strand	genes[member|symbol|gid|name](##-separated)	CTCF.p2_site_number	binding_sites (WM_name:relative distance to peak center:posterior binding probability)
chr4	6329117	6329235	reg1000001.p1	25.723	+	TSC_hg19_v1_chr4_+_6271608 AK295986 BC030130 AK312897	-57550	+	Y18064 TSC_hg19_v1_chr4_+_6271588	-57582	+	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	-57608	+	AB590545 AK093115 AX747932 NM_181876	54408	-	BC032954 NM_001206996	93668	-	AF086924 TSC_hg19_v1_chr4_-_6474082	144869	-	AK295986|WFS1|7466|Wolfram syndrome 1 (wolframin)##BC030130|WFS1|7466|Wolfram syndrome 1 (wolframin)##AK312897|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##AK093115|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##NM_181876|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##BC032954|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##NM_001206996|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##AF086924|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma	0.999825	CTCF.p2:10:1.000
chr7	5603327	5603445	reg1000002.p1	24.519	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-33177	-	TSC_hg19_v1_chr7_-_5569235 BC012854 CU680416 EF095209 BC008633 DQ471327 AB385102 DQ890960 DQ894128 K00790	-34140	-	BC113036 TSC_hg19_v1_chr7_-_5568855	-34545	-	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	29052	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	29124	+	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	217836	-	X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##BC012854|ACTB|60|actin, beta##EF095209|ACTB|60|actin, beta##BC008633|ACTB|60|actin, beta##DQ471327|ACTB|60|actin, beta##DQ890960|ACTB|60|actin, beta##DQ894128|ACTB|60|actin, beta##K00790|ACTB|60|actin, beta##BC113036|ACTB|60|actin, beta##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216	0.992645	CTCF.p2:-3:0.993
chr3	113007036	113007155	reg1000003.p1	24.287	+	AY358328 NM_033254 AK309055	-75696	+	BC067743 TSC_hg19_v1_chr3_-_112738514 AK295954 AK293218 BC014673 NM_015412 CR749341	-268549	-	TSC_hg19_v1_chr3_-_112738512 AK301161 EU831596 EU831683 EU831956 EU832050 CU688320 AL117573 BC056663 AK295165 AK304022 AK024325 AK300811 AK304083	-268597	-	BC101582 BC113553 AK056472 NM_001164496 NM_018338	153244	-	TSC_hg19_v1_chr3_-_113233690 AK296160	226591	-	AY099107 BC036951 TSC_hg19_v1_chr3_-_113234023 AK057966 AL832327 AL832148 NM_144718	226898	-	AY358328|BOC|91653|Boc homolog (mouse)##NM_033254|BOC|91653|Boc homolog (mouse)##AK309055|BOC|91653|Boc homolog (mouse)##BC067743|C3orf17|25871|chromosome 3 open reading frame 17##AK295954|C3orf17|25871|chromosome 3 open reading frame 17##AK293218|C3orf17|25871|chromosome 3 open reading frame 17##BC014673|C3orf17|25871|chromosome 3 open reading frame 17##NM_015412|C3orf17|25871|chromosome 3 open reading frame 17##CR749341|C3orf17|25871|chromosome 3 open reading frame 17##AK301161|C3orf17|25871|chromosome 3 open reading frame 17##EU831596|C3orf17|25871|chromosome 3 open reading frame 17##EU831683|C3orf17|25871|chromosome 3 open reading frame 17##EU831956|C3orf17|25871|chromosome 3 open reading frame 17##EU832050|C3orf17|25871|chromosome 3 open reading frame 17##AL117573|C3orf17|25871|chromosome 3 open reading frame 17##BC056663|C3orf17|25871|chromosome 3 open reading frame 17##AK295165|C3orf17|25871|chromosome 3 open reading frame 17##AK304022|C3orf17|25871|chromosome 3 open reading frame 17##AK024325|C3orf17|25871|chromosome 3 open reading frame 17##AK300811|C3orf17|25871|chromosome 3 open reading frame 17##AK304083|C3orf17|25871|chromosome 3 open reading frame 17##BC101582|WDR52|55779|WD repeat domain 52##BC113553|WDR52|55779|WD repeat domain 52##AK056472|WDR52|55779|WD repeat domain 52##NM_001164496|WDR52|55779|WD repeat domain 52##NM_018338|WDR52|55779|WD repeat domain 52##AK296160|SPICE1|152185|spindle and centriole associated protein 1##AY099107|SPICE1|152185|spindle and centriole associated protein 1##BC036951|SPICE1|152185|spindle and centriole associated protein 1##AK057966|SPICE1|152185|spindle and centriole associated protein 1##AL832327|SPICE1|152185|spindle and centriole associated protein 1##AL832148|SPICE1|152185|spindle and centriole associated protein 1##NM_144718|SPICE1|152185|spindle and centriole associated protein 1	0.259336	CTCF.p2:4:0.259
chr16	88509554	88509666	reg1000000.p1	23.624	+	NM_001127464	-15732	+	AK094158 NM_001173543	-505987	+	AK315535 NM_001173542	-516134	+	TSC_hg19_v1_chr16_+_88519687 AF488691	10095	+	TSC_hg19_v1_chr16_+_88519921 NM_153813	10355	+	TSC_hg19_v1_chr16_+_88636807 NM_144604	127122	+	NM_001127464|ZNF469|84627|zinc finger protein 469##AK094158|BANP|54971|BTG3 associated nuclear protein##NM_001173543|BANP|54971|BTG3 associated nuclear protein##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein##AF488691|ZFPM1|161882|zinc finger protein, multitype 1##NM_153813|ZFPM1|161882|zinc finger protein, multitype 1##NM_144604|ZC3H18|124245|zinc finger CCCH-type containing 18	0.999952	CTCF.p2:-13:1.000
chr17	80739793	80739913	reg1000007.p1	23.421	+	TSC_hg19_v1_chr17_+_80710051 AJ006417 DQ891885 EU176650	-29805	+	TSC_hg19_v1_chr17_+_80710000 AK091959 AX747278	-29845	+	TSC_hg19_v1_chr17_+_80709949 BC003094 NM_005993 AB023205 AK293471 BC006364	-29899	+	BC109036 BC109037 AK301690 AK023903 NM_024702	58056	-	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	266617	-	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	269816	-	AJ006417|TBCD|6904|tubulin folding cofactor D##DQ891885|TBCD|6904|tubulin folding cofactor D##EU176650|TBCD|6904|tubulin folding cofactor D##AK091959|TBCD|6904|tubulin folding cofactor D##BC003094|TBCD|6904|tubulin folding cofactor D##NM_005993|TBCD|6904|tubulin folding cofactor D##AB023205|TBCD|6904|tubulin folding cofactor D##AK293471|TBCD|6904|tubulin folding cofactor D##BC006364|TBCD|6904|tubulin folding cofactor D##BC109036|ZNF750|79755|zinc finger protein 750##BC109037|ZNF750|79755|zinc finger protein 750##AK301690|ZNF750|79755|zinc finger protein 750##AK023903|ZNF750|79755|zinc finger protein 750##NM_024702|ZNF750|79755|zinc finger protein 750##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1	0.999851	CTCF.p2:-16:1.000
chr19	18107755	18107886	reg1000005.p1	23.331	+	NM_002248 U69883	-45710	+	BC013949 NM_138442	-61916	+	TSC_hg19_v1_chr19_+_18043824 NM_001136203	-63996	+	TSC_hg19_v1_chr19_+_18111932 NM_001025604 AK127940	4130	+	TSC_hg19_v1_chr19_+_18118978 AF193051 NM_015683 AK000689 AK128588 BC022516 AK314657 AB529119	11198	+	EU832463 EU832545 BC137404 BC137406 NM_005535 NM_153701 U03187 BC029121 TSC_hg19_v1_chr19_-_18197721 AK225919 AK290423	89912	-	NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##BC013949|CCDC124|115098|coiled-coil domain containing 124##NM_138442|CCDC124|115098|coiled-coil domain containing 124##NM_001136203|CCDC124|115098|coiled-coil domain containing 124##NM_001025604|ARRDC2|27106|arrestin domain containing 2##AK127940|ARRDC2|27106|arrestin domain containing 2##AF193051|ARRDC2|27106|arrestin domain containing 2##NM_015683|ARRDC2|27106|arrestin domain containing 2##AK000689|ARRDC2|27106|arrestin domain containing 2##AK128588|ARRDC2|27106|arrestin domain containing 2##BC022516|ARRDC2|27106|arrestin domain containing 2##AK314657|ARRDC2|27106|arrestin domain containing 2##EU832463|IL12RB1|3594|interleukin 12 receptor, beta 1##EU832545|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137404|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137406|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_005535|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_153701|IL12RB1|3594|interleukin 12 receptor, beta 1##U03187|IL12RB1|3594|interleukin 12 receptor, beta 1##BC029121|IL12RB1|3594|interleukin 12 receptor, beta 1##AK225919|IL12RB1|3594|interleukin 12 receptor, beta 1##AK290423|IL12RB1|3594|interleukin 12 receptor, beta 1	0.99996	CTCF.p2:11:1.000
chr1	999732	999912	reg1004086.p2	23.300	+	TSC_hg19_v1_chr1_+_995109 BC033949	-4710	+	TSC_hg19_v1_chr1_+_995079 AK310350	-4736	+	TSC_hg19_v1_chr1_+_978666 BC084578	-21100	+	AK296576 NM_001205252	9864	-	AK301998 TSC_hg19_v1_chr1_-_1051470 AK057368 AK124054 AK128434 AK000591 AY358490	51654	-	NM_017891	51913	-	BC033949|LOC100288175|100288175|uncharacterized LOC100288175##AK310350|LOC100288175|100288175|uncharacterized LOC100288175##BC084578|AGRN|375790|agrin##AK296576|RNF223|401934|ring finger protein 223##NM_001205252|RNF223|401934|ring finger protein 223##AK301998|C1orf159|54991|chromosome 1 open reading frame 159##AK057368|C1orf159|54991|chromosome 1 open reading frame 159##AK124054|C1orf159|54991|chromosome 1 open reading frame 159##AK128434|C1orf159|54991|chromosome 1 open reading frame 159##AK000591|C1orf159|54991|chromosome 1 open reading frame 159##AY358490|C1orf159|54991|chromosome 1 open reading frame 159##NM_017891|C1orf159|54991|chromosome 1 open reading frame 159	0.0	
chr15	22436192	22436316	reg1000006.p1	23.003	+	BC136597 BC136598 NM_001005241 DQ786223	-53809	+	BC136985 NM_001004719	-67777	+	NM_207355 BC066981	-353116	-	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	36968	-	AK097517 NM_001001413	299991	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	397216	+	BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5	1.033674	CTCF.p2:-31:0.998
chr17	6955494	6955633	reg1000014.p1	22.953	+	AK074674 NM_153357	-8322	-	TSC_hg19_v1_chr17_+_6939347 BC142618 NM_201566	-16178	+	TSC_hg19_v1_chr17_+_6926416 AK122893	-29146	+	D50532 BC027858 BC039011 AK291975 AK292363 NM_006344 NM_182906	27988	-	AF529374 U97197 AB528625 CU677885 DQ892652 DQ895891 NM_080914	62030	-	X55284 TSC_hg19_v1_chr17_-_7018008 M11025	62426	-	AK074674|SLC16A11|162515|solute carrier family 16, member 11 (monocarboxylic acid transporter 11)##NM_153357|SLC16A11|162515|solute carrier family 16, member 11 (monocarboxylic acid transporter 11)##BC142618|SLC16A13|201232|solute carrier family 16, member 13 (monocarboxylic acid transporter 13)##NM_201566|SLC16A13|201232|solute carrier family 16, member 13 (monocarboxylic acid transporter 13)##AK122893|BCL6B|255877|B-cell CLL/lymphoma 6, member B##D50532|CLEC10A|10462|C-type lectin domain family 10, member A##BC027858|CLEC10A|10462|C-type lectin domain family 10, member A##BC039011|CLEC10A|10462|C-type lectin domain family 10, member A##AK291975|CLEC10A|10462|C-type lectin domain family 10, member A##AK292363|CLEC10A|10462|C-type lectin domain family 10, member A##NM_006344|CLEC10A|10462|C-type lectin domain family 10, member A##NM_182906|CLEC10A|10462|C-type lectin domain family 10, member A##AF529374|ASGR2|433|asialoglycoprotein receptor 2##U97197|ASGR2|433|asialoglycoprotein receptor 2##DQ892652|ASGR2|433|asialoglycoprotein receptor 2##DQ895891|ASGR2|433|asialoglycoprotein receptor 2##NM_080914|ASGR2|433|asialoglycoprotein receptor 2##X55284|ASGR2|433|asialoglycoprotein receptor 2##M11025|ASGR2|433|asialoglycoprotein receptor 2	0.409811	CTCF.p2:-11:0.410
chr17	71251955	71252088	reg1000004.p1	22.935	+	BC005005 TSC_hg19_v1_chr17_+_71229423	-22631	+	TSC_hg19_v1_chr17_+_71228800 AY163812 NM_001100621 NM_001100622 NM_017941 AL136740 AK000728	-23215	+	TSC_hg19_v1_chr17_+_71228596 AK292838	-23427	+	BC157870 NM_001129885	5997	-	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	56119	-	NM_001144952	388205	-	BC005005|C17orf80|55028|chromosome 17 open reading frame 80##AY163812|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100621|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100622|C17orf80|55028|chromosome 17 open reading frame 80##NM_017941|C17orf80|55028|chromosome 17 open reading frame 80##AL136740|C17orf80|55028|chromosome 17 open reading frame 80##AK000728|C17orf80|55028|chromosome 17 open reading frame 80##AK292838|C17orf80|55028|chromosome 17 open reading frame 80##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2	0.999924	CTCF.p2:-20:1.000
chr22	50468825	50468943	reg1000009.p1	22.836	+	NM_001001694 AK123987	-17814	-	TSC_hg19_v1_chr22_+_50354433 AK292005 BC141855 BC052239 AB528933 BC140030	-114373	+	TSC_hg19_v1_chr22_+_50354140 NM_001001852 AB114795	-114735	+	TSC_hg19_v1_chr22_-_50523682 AK294048	54808	-	BC028425 BC070042 TSC_hg19_v1_chr22_-_50523742	54855	-	NM_139202 TSC_hg19_v1_chr22_-_50523814 AK297341	54920	-	NM_001001694|IL17REL|400935|interleukin 17 receptor E-like##AK123987|IL17REL|400935|interleukin 17 receptor E-like##AK292005|PIM3|415116|pim-3 oncogene##BC141855|PIM3|415116|pim-3 oncogene##BC052239|PIM3|415116|pim-3 oncogene##BC140030|PIM3|415116|pim-3 oncogene##NM_001001852|PIM3|415116|pim-3 oncogene##AB114795|PIM3|415116|pim-3 oncogene##AK294048|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1##BC028425|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1##BC070042|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1##NM_139202|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1##AK297341|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	0.790343	CTCF.p2:8:0.790
chr17	29764425	29764553	reg1000010.p1	22.755	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-45625	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-45822	+	TSC_hg19_v1_chr17_-_29648631 BC035572 AK295311 AK312348 NM_001003927 NM_014210	-115791	-	TSC_hg19_v1_chr17_+_29815032 AK097424	50572	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	421782	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	464177	-	BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC035572|EVI2A|2123|ecotropic viral integration site 2A##AK295311|EVI2A|2123|ecotropic viral integration site 2A##AK312348|EVI2A|2123|ecotropic viral integration site 2A##NM_001003927|EVI2A|2123|ecotropic viral integration site 2A##NM_014210|EVI2A|2123|ecotropic viral integration site 2A##AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.115944	
chr8	37773819	37773947	reg1000013.p1	22.711	+	AY280968 DQ083995 AF368294 DQ236342 BC077720 BC054881 TSC_hg19_v1_chr8_-_37757016 AK291781 AK026275 NM_001002814 NM_025151	-16882	-	TSC_hg19_v1_chr8_-_37727937 AK026177	-45933	-	NM_018310 TSC_hg19_v1_chr8_-_37707430 AK294337	-66439	-	BC029504 NM_152413	23763	-	S53291 TSC_hg19_v1_chr8_-_37822825	48936	-	AY487247 FJ170286 FJ170287 BC075017 AK313857 X70811 AK309919 AK293033 NM_000025	50201	-	AY280968|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ083995|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AF368294|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ236342|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC077720|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC054881|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK291781|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK026275|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_001002814|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_025151|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK026177|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_018310|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK294337|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##BC029504|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##NM_152413|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##S53291|ADRB3|155|adrenergic, beta-3-, receptor##AY487247|ADRB3|155|adrenergic, beta-3-, receptor##FJ170286|ADRB3|155|adrenergic, beta-3-, receptor##FJ170287|ADRB3|155|adrenergic, beta-3-, receptor##BC075017|ADRB3|155|adrenergic, beta-3-, receptor##AK313857|ADRB3|155|adrenergic, beta-3-, receptor##X70811|ADRB3|155|adrenergic, beta-3-, receptor##AK309919|ADRB3|155|adrenergic, beta-3-, receptor##AK293033|ADRB3|155|adrenergic, beta-3-, receptor##NM_000025|ADRB3|155|adrenergic, beta-3-, receptor	0.147713	
chr16	85855151	85855300	reg1000008.p1	22.628	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-21890	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-21920	+	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	-21992	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	77561	+	TSC_hg19_v1_chr16_-_86542463 AK091834	687239	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	688931	+	BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1	0.980647	CTCF.p2:-50:0.981
chr1	999395	999575	reg1004086.p1	22.589	+	TSC_hg19_v1_chr1_+_995109 BC033949	-4373	+	TSC_hg19_v1_chr1_+_995079 AK310350	-4399	+	TSC_hg19_v1_chr1_+_978666 BC084578	-20763	+	AK296576 NM_001205252	10201	-	AK301998 TSC_hg19_v1_chr1_-_1051470 AK057368 AK124054 AK128434 AK000591 AY358490	51991	-	NM_017891	52250	-	BC033949|LOC100288175|100288175|uncharacterized LOC100288175##AK310350|LOC100288175|100288175|uncharacterized LOC100288175##BC084578|AGRN|375790|agrin##AK296576|RNF223|401934|ring finger protein 223##NM_001205252|RNF223|401934|ring finger protein 223##AK301998|C1orf159|54991|chromosome 1 open reading frame 159##AK057368|C1orf159|54991|chromosome 1 open reading frame 159##AK124054|C1orf159|54991|chromosome 1 open reading frame 159##AK128434|C1orf159|54991|chromosome 1 open reading frame 159##AK000591|C1orf159|54991|chromosome 1 open reading frame 159##AY358490|C1orf159|54991|chromosome 1 open reading frame 159##NM_017891|C1orf159|54991|chromosome 1 open reading frame 159	0.094851	
chr7	142705138	142705264	reg1000022.p1	22.502	+	M64934 TSC_hg19_v1_chr7_-_142659447 DQ896776 EU176416 BC003135 NM_000420	-45744	-	BC050639 TSC_hg19_v1_chr7_-_142659405 AK314831	-45800	-	BC014596 NM_178829 AB083483 AB083484 AB464498	-68542	+	NM_001001658 BC137048 BC137049	19048	-	BC137044 NM_001001667	44225	+	BC010950 AK312227 BC010951 NM_002652 Y10179 J03460	123975	+	M64934|KEL|3792|Kell blood group, metallo-endopeptidase##DQ896776|KEL|3792|Kell blood group, metallo-endopeptidase##EU176416|KEL|3792|Kell blood group, metallo-endopeptidase##BC003135|KEL|3792|Kell blood group, metallo-endopeptidase##NM_000420|KEL|3792|Kell blood group, metallo-endopeptidase##BC050639|KEL|3792|Kell blood group, metallo-endopeptidase##AK314831|KEL|3792|Kell blood group, metallo-endopeptidase##BC014596|C7orf34|135927|chromosome 7 open reading frame 34##NM_178829|C7orf34|135927|chromosome 7 open reading frame 34##AB083483|C7orf34|135927|chromosome 7 open reading frame 34##AB083484|C7orf34|135927|chromosome 7 open reading frame 34##NM_001001658|OR9A2|135924|olfactory receptor, family 9, subfamily A, member 2##BC137048|OR9A2|135924|olfactory receptor, family 9, subfamily A, member 2##BC137049|OR9A2|135924|olfactory receptor, family 9, subfamily A, member 2##BC137044|OR6V1|346517|olfactory receptor, family 6, subfamily V, member 1##NM_001001667|OR6V1|346517|olfactory receptor, family 6, subfamily V, member 1##BC010950|PIP|5304|prolactin-induced protein##AK312227|PIP|5304|prolactin-induced protein##BC010951|PIP|5304|prolactin-induced protein##NM_002652|PIP|5304|prolactin-induced protein##Y10179|PIP|5304|prolactin-induced protein##J03460|PIP|5304|prolactin-induced protein	0.993975	CTCF.p2:-9:0.994
chr3	50230164	50230288	reg1000017.p1	22.491	+	DQ426874 NM_000172 NM_144499 X15088 BC095505 AF493908	-1136	+	BC042914 NM_004186 U33920	-37320	+	TSC_hg19_v1_chr3_+_50192514 AB209259	-37729	+	TSC_hg19_v1_chr3_+_50242705 NM_006841 AK299677 BX537382 AK293801 AK313461 BC042875 U49082 AF244548	12480	+	TSC_hg19_v1_chr3_+_50273632 BC012138	43377	+	AK055574 TSC_hg19_v1_chr3_+_50273635	43411	+	NM_000172|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##NM_144499|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##X15088|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##BC095505|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##AF493908|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##BC042914|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##NM_004186|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##U33920|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##AB209259|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##NM_006841|SLC38A3|10991|solute carrier family 38, member 3##AK299677|SLC38A3|10991|solute carrier family 38, member 3##BX537382|SLC38A3|10991|solute carrier family 38, member 3##AK293801|SLC38A3|10991|solute carrier family 38, member 3##AK313461|SLC38A3|10991|solute carrier family 38, member 3##BC042875|SLC38A3|10991|solute carrier family 38, member 3##U49082|SLC38A3|10991|solute carrier family 38, member 3##AF244548|SLC38A3|10991|solute carrier family 38, member 3##BC012138|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AK055574|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	0.773218	CTCF.p2:-5:0.773
chr17	75491107	75491236	reg1000012.p2	22.450	+	AK056495 NM_001113495	-19847	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-43782	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-44389	+	TSC_hg19_v1_chr17_+_75543021 AK096234	51849	+	BC039479 NM_001142640 NM_018996	509111	+	TSC_hg19_v1_chr17_-_76124768 AK074065	633601	-	AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK074065|TMC6|11322|transmembrane channel-like 6	0.976557	CTCF.p2:32:0.977
chr11	130731969	130732093	reg1000025.p1	22.382	+	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-413369	+	TSC_hg19_v1_chr11_-_130298505 NM_007037	-433511	-	BC113874 TSC_hg19_v1_chr11_-_130298419 BC089435	-433669	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	54314	-	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	54357	-	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	508438	+	AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_007037|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC113874|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC089435|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin	1.942004	CTCF.p2:-18:0.955	CTCF.p2:36:0.987
chr14	21560769	21560885	reg1000015.p1	22.345	+	TSC_hg19_v1_chr14_+_21538418 BX248768 BC144317 AK074057 BC142692 BC151212 AK126755 NM_018071	-22393	+	BC137537 BC137538 NM_138331	-34812	+	AK292697 NM_032572 AY170392 AJ306608 AJ306609 AJ306610 AY359097 BC112334	-50362	+	BC036105 TSC_hg19_v1_chr14_-_21566504	5675	-	TSC_hg19_v1_chr14_-_21566815 AB015427 NM_016423	5991	-	NM_001146683	6268	+	BX248768|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC144317|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##AK074057|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC142692|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC151212|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##AK126755|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##NM_018071|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC137537|RNASE8|122665|ribonuclease, RNase A family, 8##BC137538|RNASE8|122665|ribonuclease, RNase A family, 8##NM_138331|RNASE8|122665|ribonuclease, RNase A family, 8##AK292697|RNASE7|84659|ribonuclease, RNase A family, 7##NM_032572|RNASE7|84659|ribonuclease, RNase A family, 7##AY170392|RNASE7|84659|ribonuclease, RNase A family, 7##AJ306608|RNASE7|84659|ribonuclease, RNase A family, 7##AJ306609|RNASE7|84659|ribonuclease, RNase A family, 7##AJ306610|RNASE7|84659|ribonuclease, RNase A family, 7##AY359097|RNASE7|84659|ribonuclease, RNase A family, 7##BC112334|RNASE7|84659|ribonuclease, RNase A family, 7##BC036105|ZNF219|51222|zinc finger protein 219##AB015427|ZNF219|51222|zinc finger protein 219##NM_016423|ZNF219|51222|zinc finger protein 219##NM_001146683|C14orf176|643382|chromosome 14 open reading frame 176	0.734822	CTCF.p2:-26:0.691
chr1	23964023	23964150	reg1000034.p1	22.314	+	NM_002167 X69111	-77802	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	-78102	-	L22846 NM_004091	-106375	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	54194	+	TSC_hg19_v1_chr1_+_24018295 BC018970	54213	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	105818	+	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11##BC018970|RPL11|6135|ribosomal protein L11##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)	0.999559	CTCF.p2:12:1.000
chr16	87812817	87812945	reg1000023.p1	22.267	+	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	-13311	-	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	-13366	-	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	-176171	+	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	90194	-	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	157266	-	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	172287	+	BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##BC001044|KLHDC4|54758|kelch domain containing 4##DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3##DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein	0.944554	CTCF.p2:-23:0.945
chr12	53278721	53278846	reg1000033.p1	22.190	+	AB463817 AX721217 AK298636 AK096419 AK290901 NM_173352	-36037	-	AJ564105 BC063648 NM_175834 BC039148	-50714	-	CU692074 EU832356 EU832441 BC042174 X67683 BC012867 AK098110 AK296582 AK299394 AK299400 AK299451 AK307941 NM_002272	-70912	-	CU687300 AB528612 AM392826 AM392892 DQ892637 DQ895875 U76549 M34225 M26512 BC075839 BC073760 X74929 BC000654 Z36777 BC063513 TSC_hg19_v1_chr12_-_53298839 AK222941 D28446 NM_002273	20033	-	NM_199187 AK308506	63878	+	NM_000224 TSC_hg19_v1_chr12_+_53342874	64078	+	AK298636|KRT78|196374|keratin 78##AK096419|KRT78|196374|keratin 78##AK290901|KRT78|196374|keratin 78##NM_173352|KRT78|196374|keratin 78##AJ564105|KRT79|338785|keratin 79##BC063648|KRT79|338785|keratin 79##NM_175834|KRT79|338785|keratin 79##BC039148|KRT79|338785|keratin 79##EU832356|KRT4|3851|keratin 4##EU832441|KRT4|3851|keratin 4##BC042174|KRT4|3851|keratin 4##X67683|KRT4|3851|keratin 4##BC012867|KRT4|3851|keratin 4##AK098110|KRT4|3851|keratin 4##AK296582|KRT4|3851|keratin 4##AK299394|KRT4|3851|keratin 4##AK299400|KRT4|3851|keratin 4##AK299451|KRT4|3851|keratin 4##AK307941|KRT4|3851|keratin 4##NM_002272|KRT4|3851|keratin 4##AM392826|KRT8|3856|keratin 8##AM392892|KRT8|3856|keratin 8##DQ892637|KRT8|3856|keratin 8##DQ895875|KRT8|3856|keratin 8##U76549|KRT8|3856|keratin 8##M34225|KRT8|3856|keratin 8##M26512|KRT8|3856|keratin 8##BC075839|KRT8|3856|keratin 8##BC073760|KRT8|3856|keratin 8##X74929|KRT8|3856|keratin 8##BC000654|KRT8|3856|keratin 8##Z36777|KRT8|3856|keratin 8##BC063513|KRT8|3856|keratin 8##AK222941|KRT8|3856|keratin 8##NM_002273|KRT8|3856|keratin 8##NM_199187|KRT18|3875|keratin 18##AK308506|KRT18|3875|keratin 18##NM_000224|KRT18|3875|keratin 18	1.008456	CTCF.p2:-13:0.998
chr22	23301493	23301624	reg1000031.p1	22.105	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	-71475	+	TSC_hg19_v1_chr22_+_23222900 AK127411 S77601 X57802 X57803 X57816 X57818 AB369252 AF026919 AF026925 AY190825 L26400 AF490955 AF490961	-78629	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	-87865	+	TSC_hg19_v1_chr22_+_23412527 BC037333 BC026342 NM_002073	110958	+	AK312519 TSC_hg19_v1_chr22_+_23412728 AK293653	111171	+	BC008986 AF133587 NM_014433 AK299530 AK310327	182685	-	AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AB369252|CYAT1|100290481|immunoglobulin lambda light chain-like##BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3##BC037333|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC026342|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##NM_002073|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK312519|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK293653|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1##AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1##NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1	1.188031	CTCF.p2:20:0.999
chr6	170231878	170232005	reg1000624.p1	22.094	+	TSC_hg19_v1_chr6_+_170151717 AK002014 AK294090 NM_018341 BC044812	-80219	+	TSC_hg19_v1_chr6_-_170151640 AF519569 NM_174910 AK023627 BC063455 BC053352	-80281	-	HQ258741 BC113639 TSC_hg19_v1_chr6_-_170151619 BC043594	-80353	-	AK314234 NM_005618 BC028096	367733	-	AK294415 TSC_hg19_v1_chr6_+_170599933	367920	+	AK311474 TSC_hg19_v1_chr6_-_170600250	368267	-	AK002014|C6orf70|55780|chromosome 6 open reading frame 70##AK294090|C6orf70|55780|chromosome 6 open reading frame 70##NM_018341|C6orf70|55780|chromosome 6 open reading frame 70##BC044812|C6orf70|55780|chromosome 6 open reading frame 70##AF519569|TCTE3|6991|t-complex-associated-testis-expressed 3##NM_174910|TCTE3|6991|t-complex-associated-testis-expressed 3##HQ258741|TCTE3|6991|t-complex-associated-testis-expressed 3##BC113639|TCTE3|6991|t-complex-associated-testis-expressed 3##AK314234|DLL1|28514|delta-like 1 (Drosophila)##NM_005618|DLL1|28514|delta-like 1 (Drosophila)##BC028096|DLL1|28514|delta-like 1 (Drosophila)##AK294415|FAM120B|84498|family with sequence similarity 120B	0.231572	CTCF.p2:-22:0.232
chr15	45722556	45722688	reg1000021.p1	21.948	+	NM_024063 TSC_hg19_v1_chr15_+_45694551 AK291457 AK023232 AK225463 BC051861 BC000981 AK022348	-28070	+	TSC_hg19_v1_chr15_-_45670958 NM_001482	-51655	-	TSC_hg19_v1_chr15_-_45670743 CU678590 S68805 BC004141 AK098055 AK223585 AK294995 AK298350	-51883	-	NM_032413 NM_197955 TSC_hg19_v1_chr15_+_45722808 AF228422 AK026298 BC021173 AB026707	175	+	BC026089 NM_013309 TSC_hg19_v1_chr15_-_45815017	92388	-	AF080470 NM_012388 TSC_hg19_v1_chr15_+_45879539 AK091740	156864	+	NM_024063|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK291457|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK023232|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK225463|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC051861|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC000981|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK022348|SPATA5L1|79029|spermatogenesis associated 5-like 1##NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##NM_032413|C15orf48|84419|chromosome 15 open reading frame 48##NM_197955|C15orf48|84419|chromosome 15 open reading frame 48##AF228422|C15orf48|84419|chromosome 15 open reading frame 48##AK026298|C15orf48|84419|chromosome 15 open reading frame 48##BC021173|C15orf48|84419|chromosome 15 open reading frame 48##AB026707|C15orf48|84419|chromosome 15 open reading frame 48##BC026089|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##NM_013309|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##AF080470|PLDN|26258|pallidin homolog (mouse)##NM_012388|PLDN|26258|pallidin homolog (mouse)	1.608416	CTCF.p2:-18:0.613	CTCF.p2:36:0.996
chr10	45428277	45428406	reg1000042.p1	21.947	+	BX538120 BC127789 BC127790 NM_001123376 AB235418	-21623	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	-547842	-	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-1284035	-	AK056518 TSC_hg19_v1_chr10_-_45455156	26806	-	TSC_hg19_v1_chr10_+_45455249 AY216713 AY216714 AY216715 AY216716 NM_032023 BC032593 AF260335 AK311531	26891	+	BC011402 AB025244 TSC_hg19_v1_chr10_-_45474258 AK002191 AK098476 AL136653 AB022718 AK300839 AK312496 NM_007021	45928	-	BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)##AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##BC011402|C10orf10|11067|chromosome 10 open reading frame 10##AB025244|C10orf10|11067|chromosome 10 open reading frame 10##AK002191|C10orf10|11067|chromosome 10 open reading frame 10##AK098476|C10orf10|11067|chromosome 10 open reading frame 10##AL136653|C10orf10|11067|chromosome 10 open reading frame 10##AB022718|C10orf10|11067|chromosome 10 open reading frame 10##AK300839|C10orf10|11067|chromosome 10 open reading frame 10##AK312496|C10orf10|11067|chromosome 10 open reading frame 10##NM_007021|C10orf10|11067|chromosome 10 open reading frame 10	0.9934	CTCF.p2:-18:0.993
chr7	75943709	75943831	reg1000011.p1	21.933	+	TSC_hg19_v1_chr7_+_75933019 S74571	-10716	+	TSC_hg19_v1_chr7_+_75932877 AK311446	-10860	+	AK311894 TSC_hg19_v1_chr7_+_75931991 BC012768 BC073768 AB020027 AL050380 DQ891304 DQ893349 DQ894489 DQ896669 AB528488 BT019888 CR407614 CR536489 BC014920	-11740	+	AB384983 AF142498 CR541904 CR541925 CU676788 TSC_hg19_v1_chr7_-_75988268	44428	-	AK295029 TSC_hg19_v1_chr7_-_75988309 AB024334 AK024230 AK293505	44523	-	BC020963 TSC_hg19_v1_chr7_-_75988335 NM_012479	44560	-	S74571|HSPB1|3315|heat shock 27kDa protein 1##AK311446|HSPB1|3315|heat shock 27kDa protein 1##AK311894|HSPB1|3315|heat shock 27kDa protein 1##BC012768|HSPB1|3315|heat shock 27kDa protein 1##BC073768|HSPB1|3315|heat shock 27kDa protein 1##AB020027|HSPB1|3315|heat shock 27kDa protein 1##AL050380|HSPB1|3315|heat shock 27kDa protein 1##DQ891304|HSPB1|3315|heat shock 27kDa protein 1##DQ893349|HSPB1|3315|heat shock 27kDa protein 1##DQ894489|HSPB1|3315|heat shock 27kDa protein 1##DQ896669|HSPB1|3315|heat shock 27kDa protein 1##BT019888|HSPB1|3315|heat shock 27kDa protein 1##CR407614|HSPB1|3315|heat shock 27kDa protein 1##CR536489|HSPB1|3315|heat shock 27kDa protein 1##BC014920|HSPB1|3315|heat shock 27kDa protein 1##AF142498|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##CR541904|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##CR541925|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##AK295029|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##AB024334|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##AK024230|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##AK293505|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##BC020963|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##NM_012479|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide	1.911797	CTCF.p2:36:0.919	CTCF.p2:-39:0.992
chr1	225662753	225662885	reg1000039.p1	21.931	+	NM_194442	-46263	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	-47018	-	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	-47090	-	AF519769 TSC_hg19_v1_chr1_-_225840803 AY345143 AK290179 BC095481 NM_001008493 NM_018212	177968	-	NM_001130440 NM_003133 TSC_hg19_v1_chr1_+_225965547 BC066957 BC008443 EF488978 AF070649 BC021995 BC106005 U20998 BC015094 AK289595 BC022415 BC045603	302713	+	TSC_hg19_v1_chr1_+_225965556 BC064351 AL050363 BC067845	302751	+	NM_194442|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##AF519769|ENAH|55740|enabled homolog (Drosophila)##AY345143|ENAH|55740|enabled homolog (Drosophila)##AK290179|ENAH|55740|enabled homolog (Drosophila)##BC095481|ENAH|55740|enabled homolog (Drosophila)##NM_001008493|ENAH|55740|enabled homolog (Drosophila)##NM_018212|ENAH|55740|enabled homolog (Drosophila)##NM_001130440|SRP9|6726|signal recognition particle 9kDa##NM_003133|SRP9|6726|signal recognition particle 9kDa##BC066957|SRP9|6726|signal recognition particle 9kDa##BC008443|SRP9|6726|signal recognition particle 9kDa##EF488978|SRP9|6726|signal recognition particle 9kDa##AF070649|SRP9|6726|signal recognition particle 9kDa##BC021995|SRP9|6726|signal recognition particle 9kDa##BC106005|SRP9|6726|signal recognition particle 9kDa##U20998|SRP9|6726|signal recognition particle 9kDa##BC015094|SRP9|6726|signal recognition particle 9kDa##AK289595|SRP9|6726|signal recognition particle 9kDa##BC022415|SRP9|6726|signal recognition particle 9kDa##BC064351|SRP9|6726|signal recognition particle 9kDa##AL050363|SRP9|6726|signal recognition particle 9kDa##BC067845|SRP9|6726|signal recognition particle 9kDa	1.914235	CTCF.p2:-20:0.998	CTCF.p2:32:0.917
chr11	33879524	33879644	reg1000019.p1	21.831	+	AB209039 AF176702 TSC_hg19_v1_chr11_-_33796067 AF174595 CU692298 EU832324 EU832409 AL136625 BC046110 AK001943 AK128454 AK304866 BC039291 NM_012175 NM_033406	-83592	-	TSC_hg19_v1_chr11_-_33757970 M27909 AK311778 X16447 X17198 NM_000611 NM_203329 NM_203330 NM_203331	-121636	-	NM_001127227	-135087	-	AB463835 CU692080 DQ892333 DQ895538 BC073973 TSC_hg19_v1_chr11_-_33891132	11458	-	BC035607 TSC_hg19_v1_chr11_-_33891285	11688	-	BC042426 TSC_hg19_v1_chr11_-_33891402 BC034041 NM_001142316	11807	-	AB209039|FBXO3|26273|F-box protein 3##AF176702|FBXO3|26273|F-box protein 3##AF174595|FBXO3|26273|F-box protein 3##EU832324|FBXO3|26273|F-box protein 3##EU832409|FBXO3|26273|F-box protein 3##AL136625|FBXO3|26273|F-box protein 3##BC046110|FBXO3|26273|F-box protein 3##AK001943|FBXO3|26273|F-box protein 3##AK128454|FBXO3|26273|F-box protein 3##AK304866|FBXO3|26273|F-box protein 3##BC039291|FBXO3|26273|F-box protein 3##NM_012175|FBXO3|26273|F-box protein 3##NM_033406|FBXO3|26273|F-box protein 3##M27909|CD59|966|CD59 molecule, complement regulatory protein##AK311778|CD59|966|CD59 molecule, complement regulatory protein##X16447|CD59|966|CD59 molecule, complement regulatory protein##X17198|CD59|966|CD59 molecule, complement regulatory protein##NM_000611|CD59|966|CD59 molecule, complement regulatory protein##NM_203329|CD59|966|CD59 molecule, complement regulatory protein##NM_203330|CD59|966|CD59 molecule, complement regulatory protein##NM_203331|CD59|966|CD59 molecule, complement regulatory protein##NM_001127227|CD59|966|CD59 molecule, complement regulatory protein##DQ892333|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##DQ895538|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC073973|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC035607|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC042426|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC034041|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142316|LMO2|4005|LIM domain only 2 (rhombotin-like 1)	0.999293	CTCF.p2:-4:0.999
chr9	139014852	139014976	reg1000035.p1	21.801	+	TSC_hg19_v1_chr9_-_139010722 NM_152833	-4185	-	BC014304 BC013282 TSC_hg19_v1_chr9_-_139010700 AK023162 AK091349 AX746927 BC021231	-4244	-	BC092490 BC111053 TSC_hg19_v1_chr9_-_139010485	-4479	-	AB590758 AB593065 AF156889 NM_014564 AB593066 TSC_hg19_v1_chr9_-_139095090	80074	-	AF156888 NM_178138 AB593067 AB593063 AB593062	82050	-	BC047604 AB527428 TSC_hg19_v1_chr9_-_139137659 AJ318051 NM_181701	122771	-	NM_152833|C9orf69|90120|chromosome 9 open reading frame 69##BC014304|C9orf69|90120|chromosome 9 open reading frame 69##BC013282|C9orf69|90120|chromosome 9 open reading frame 69##AK023162|C9orf69|90120|chromosome 9 open reading frame 69##AK091349|C9orf69|90120|chromosome 9 open reading frame 69##BC021231|C9orf69|90120|chromosome 9 open reading frame 69##BC092490|C9orf69|90120|chromosome 9 open reading frame 69##BC111053|C9orf69|90120|chromosome 9 open reading frame 69##AB593065|LHX3|8022|LIM homeobox 3##AF156889|LHX3|8022|LIM homeobox 3##NM_014564|LHX3|8022|LIM homeobox 3##AB593066|LHX3|8022|LIM homeobox 3##AF156888|LHX3|8022|LIM homeobox 3##NM_178138|LHX3|8022|LIM homeobox 3##AB593067|LHX3|8022|LIM homeobox 3##AB593063|LHX3|8022|LIM homeobox 3##AB593062|LHX3|8022|LIM homeobox 3##BC047604|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##AJ318051|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##NM_181701|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2	0.995896	CTCF.p2:15:0.996
chr4	3445304	3445427	reg1000066.p1	21.758	+	TSC_hg19_v1_chr4_+_3443701 AK314099 D14012 NM_001528	-1657	+	BC112190 BC112192 TSC_hg19_v1_chr4_+_3443674	-1698	+	AF030109 NM_198227	-73642	+	NM_001164673 NM_173660 AK091037 AX746744 BC141852 BC131544 AB220918	19702	+	AB463840 AK310598 M63959 TSC_hg19_v1_chr4_-_3534150 AK312698 AK222527 AK222504 AK310851 BX647984	88780	-	TSC_hg19_v1_chr4_-_3534154 BC105074 BC112067 AK292321 NM_002337	88823	-	AK314099|HGFAC|3083|HGF activator##D14012|HGFAC|3083|HGF activator##NM_001528|HGFAC|3083|HGF activator##BC112190|HGFAC|3083|HGF activator##BC112192|HGFAC|3083|HGF activator##AF030109|RGS12|6002|regulator of G-protein signaling 12##NM_198227|RGS12|6002|regulator of G-protein signaling 12##NM_001164673|DOK7|285489|docking protein 7##NM_173660|DOK7|285489|docking protein 7##AK091037|DOK7|285489|docking protein 7##BC141852|DOK7|285489|docking protein 7##BC131544|DOK7|285489|docking protein 7##AB220918|DOK7|285489|docking protein 7##AK310598|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##M63959|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK312698|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK222527|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK222504|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK310851|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BX647984|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC105074|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC112067|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK292321|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##NM_002337|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1	0.467224	CTCF.p2:8:0.467
chr6	110026511	110026649	reg1000018.p1	21.730	+	TSC_hg19_v1_chr6_+_110012521 AK222732	-14056	+	TSC_hg19_v1_chr6_+_110012514 AK291671 AK293422 D87464	-14072	+	NM_014845 TSC_hg19_v1_chr6_+_110012488 BC041338	-14124	+	BC126301 BC117298 BC043414 NM_005284 HQ258210 HQ258216 HQ709190 HQ709191	273676	+	TSC_hg19_v1_chr6_-_110500864 BC019019 BC021022 BC044591 AK097838 BC068546	474263	-	TSC_hg19_v1_chr6_-_110501166 NM_001024934 NM_001024935 NM_001024936 NM_003931	474605	-	AK222732|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK291671|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK293422|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##D87464|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##NM_014845|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##BC041338|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##BC126301|GPR6|2830|G protein-coupled receptor 6##BC117298|GPR6|2830|G protein-coupled receptor 6##BC043414|GPR6|2830|G protein-coupled receptor 6##NM_005284|GPR6|2830|G protein-coupled receptor 6##HQ258210|GPR6|2830|G protein-coupled receptor 6##HQ258216|GPR6|2830|G protein-coupled receptor 6##HQ709190|GPR6|2830|G protein-coupled receptor 6##BC044591|WASF1|8936|WAS protein family, member 1##AK097838|WASF1|8936|WAS protein family, member 1##BC068546|WASF1|8936|WAS protein family, member 1##NM_001024934|WASF1|8936|WAS protein family, member 1##NM_001024935|WASF1|8936|WAS protein family, member 1##NM_001024936|WASF1|8936|WAS protein family, member 1##NM_003931|WASF1|8936|WAS protein family, member 1	1.049381	CTCF.p2:-37:1.000
chr17	41837860	41837992	reg1000041.p1	21.694	+	BC101086 BC101087 BC101088 BC101089 AF331844 AF326739 NM_025237	-1783	-	NM_001040002 AK291139	-98651	-	AB527749 CU686836 EU446636 BC069474 BC069506 NM_004527 NM_013999 U10492 U10493	-99011	-	AK226170 TSC_hg19_v1_chr17_-_41856314 AB451424 BT019522 CU678116 DQ893122 DQ896399 BC035701 AK129822 L05147 BC002682 NM_004090	18358	-	BC054872 BC070324 NM_001136483 BC146971 AK125817	19888	+	BC056865 TSC_hg19_v1_chr17_-_41910234	72285	-	BC101086|SOST|50964|sclerostin##BC101087|SOST|50964|sclerostin##BC101088|SOST|50964|sclerostin##BC101089|SOST|50964|sclerostin##AF331844|SOST|50964|sclerostin##AF326739|SOST|50964|sclerostin##NM_025237|SOST|50964|sclerostin##NM_001040002|MEOX1|4222|mesenchyme homeobox 1##AK291139|MEOX1|4222|mesenchyme homeobox 1##EU446636|MEOX1|4222|mesenchyme homeobox 1##BC069474|MEOX1|4222|mesenchyme homeobox 1##BC069506|MEOX1|4222|mesenchyme homeobox 1##NM_004527|MEOX1|4222|mesenchyme homeobox 1##NM_013999|MEOX1|4222|mesenchyme homeobox 1##U10492|MEOX1|4222|mesenchyme homeobox 1##U10493|MEOX1|4222|mesenchyme homeobox 1##AK226170|DUSP3|1845|dual specificity phosphatase 3##AB451424|DUSP3|1845|dual specificity phosphatase 3##BT019522|DUSP3|1845|dual specificity phosphatase 3##DQ893122|DUSP3|1845|dual specificity phosphatase 3##DQ896399|DUSP3|1845|dual specificity phosphatase 3##BC035701|DUSP3|1845|dual specificity phosphatase 3##AK129822|DUSP3|1845|dual specificity phosphatase 3##L05147|DUSP3|1845|dual specificity phosphatase 3##BC002682|DUSP3|1845|dual specificity phosphatase 3##NM_004090|DUSP3|1845|dual specificity phosphatase 3##BC054872|C17orf105|284067|chromosome 17 open reading frame 105##BC070324|C17orf105|284067|chromosome 17 open reading frame 105##NM_001136483|C17orf105|284067|chromosome 17 open reading frame 105##BC146971|C17orf105|284067|chromosome 17 open reading frame 105##AK125817|C17orf105|284067|chromosome 17 open reading frame 105##BC056865|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	1.30485	CTCF.p2:35:0.996	CTCF.p2:-38:0.309
chr15	42103708	42103833	reg1000044.p2	21.691	+	AK302482 TSC_hg19_v1_chr15_+_42066879 AL833267 AB011168 BC113983 BC114493 AK091616 AK292414	-36932	+	BC036660 NM_001128608 NM_014994 TSC_hg19_v1_chr15_+_42066666 BX648786	-37112	+	AB011090 TSC_hg19_v1_chr15_+_42052630	-51167	+	TSC_hg19_v1_chr15_+_42120310 AK289833 NM_001114632 NM_001198588 NM_005090 AB209150 AK000814 BC139899 AK000663 AK225503 AK000550 BC067834 AF065215 AK290051 DQ523799 DQ523800 AF121908 BC110415 BC025290 CU692962	16488	+	AK310651 NM_001114633 AK299419	27257	+	AF233523 NM_016642	82504	-	AK302482|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AL833267|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AB011168|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BC113983|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BC114493|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK091616|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK292414|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BC036660|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##NM_001128608|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##NM_014994|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BX648786|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AB011090|MGA|23269|MAX gene associated##AK289833|JMJD7|100137047|jumonji domain containing 7##NM_001114632|JMJD7|100137047|jumonji domain containing 7##NM_001198588|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##NM_005090|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AB209150|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AK000814|JMJD7|100137047|jumonji domain containing 7##BC139899|JMJD7|100137047|jumonji domain containing 7##AK000663|JMJD7|100137047|jumonji domain containing 7##AK225503|JMJD7|100137047|jumonji domain containing 7##AK000550|JMJD7|100137047|jumonji domain containing 7##BC067834|JMJD7|100137047|jumonji domain containing 7##AF065215|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AK290051|JMJD7|100137047|jumonji domain containing 7##DQ523799|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##DQ523800|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AF121908|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##BC110415|JMJD7|100137047|jumonji domain containing 7##BC025290|JMJD7|100137047|jumonji domain containing 7##AK310651|PLA2G4B|100137049|phospholipase A2, group IVB (cytosolic)##NM_001114633|PLA2G4B|100137049|phospholipase A2, group IVB (cytosolic)##AK299419|PLA2G4B|100137049|phospholipase A2, group IVB (cytosolic)##AF233523|SPTBN5|51332|spectrin, beta, non-erythrocytic 5##NM_016642|SPTBN5|51332|spectrin, beta, non-erythrocytic 5	0.567609	CTCF.p2:19:0.568
chr12	123344917	123345027	reg1000016.p1	21.689	+	TSC_hg19_v1_chr12_+_123320050 AK298387 BC067085 NM_003959 AB014555	-24919	+	TSC_hg19_v1_chr12_+_123319294 AK090537	-25670	+	NM_201435 TSC_hg19_v1_chr12_+_123259079 BC060796 AY254201 AK097663 AK292466	-85871	+	CU675175 TSC_hg19_v1_chr12_-_123380621	35643	-	TSC_hg19_v1_chr12_-_123380645 BC005882	35667	-	TSC_hg19_v1_chr12_-_123380691 AK022812 NM_024667	35724	-	AK298387|HIP1R|9026|huntingtin interacting protein 1 related##BC067085|HIP1R|9026|huntingtin interacting protein 1 related##NM_003959|HIP1R|9026|huntingtin interacting protein 1 related##AB014555|HIP1R|9026|huntingtin interacting protein 1 related##AK090537|HIP1R|9026|huntingtin interacting protein 1 related##NM_201435|CCDC62|84660|coiled-coil domain containing 62##BC060796|CCDC62|84660|coiled-coil domain containing 62##AY254201|CCDC62|84660|coiled-coil domain containing 62##AK097663|CCDC62|84660|coiled-coil domain containing 62##AK292466|CCDC62|84660|coiled-coil domain containing 62##BC005882|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)##AK022812|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)##NM_024667|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)	0.999663	CTCF.p2:-3:1.000
chr16	57683052	57683175	reg1000027.p3	21.669	+	NM_001145774 AK297236 AK311156 TSC_hg19_v1_chr16_+_57673403 BC013207	-9796	+	AK312405 NM_001145771 NM_001145772 NM_001145773 NM_201524 NM_201525 TSC_hg19_v1_chr16_+_57662543 AK075555 AK299110	-20659	+	NM_001145770 NM_005682 AK075270 AY358400	-29165	+	AK172801 NM_170776 BC064508 AB049169 AK310124 AK301258 BC044222 AY140959	19094	+	TSC_hg19_v1_chr16_+_57728717 NM_032269 AK292558 BC030661 BC036667 AK093035 AX747872	45616	+	TSC_hg19_v1_chr16_+_57769662 NM_005886	86532	+	NM_001145774|GPR56|9289|G protein-coupled receptor 56##AK297236|GPR56|9289|G protein-coupled receptor 56##AK311156|GPR56|9289|G protein-coupled receptor 56##BC013207|GPR56|9289|G protein-coupled receptor 56##AK312405|GPR56|9289|G protein-coupled receptor 56##NM_001145771|GPR56|9289|G protein-coupled receptor 56##NM_001145772|GPR56|9289|G protein-coupled receptor 56##NM_001145773|GPR56|9289|G protein-coupled receptor 56##NM_201524|GPR56|9289|G protein-coupled receptor 56##NM_201525|GPR56|9289|G protein-coupled receptor 56##AK075555|GPR56|9289|G protein-coupled receptor 56##AK299110|GPR56|9289|G protein-coupled receptor 56##NM_001145770|GPR56|9289|G protein-coupled receptor 56##NM_005682|GPR56|9289|G protein-coupled receptor 56##AK075270|GPR56|9289|G protein-coupled receptor 56##AY358400|GPR56|9289|G protein-coupled receptor 56##AK172801|GPR97|222487|G protein-coupled receptor 97##NM_170776|GPR97|222487|G protein-coupled receptor 97##BC064508|GPR97|222487|G protein-coupled receptor 97##AB049169|GPR97|222487|G protein-coupled receptor 97##AK310124|GPR97|222487|G protein-coupled receptor 97##AK301258|GPR97|222487|G protein-coupled receptor 97##BC044222|GPR97|222487|G protein-coupled receptor 97##AY140959|GPR97|222487|G protein-coupled receptor 97##NM_032269|CCDC135|84229|coiled-coil domain containing 135##AK292558|CCDC135|84229|coiled-coil domain containing 135##BC030661|CCDC135|84229|coiled-coil domain containing 135##BC036667|CCDC135|84229|coiled-coil domain containing 135##AK093035|CCDC135|84229|coiled-coil domain containing 135##NM_005886|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1	1.312368	CTCF.p2:-5:0.986	CTCF.p2:37:0.326
chr15	78400776	78400902	reg1000037.p1	21.655	+	NM_001101404	-15913	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	-30886	-	TSC_hg19_v1_chr15_-_77924732 AK291363	-476059	-	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	22923	-	TSC_hg19_v1_chr15_+_78441718 AK299970 AK096721 AK296002 BC036227 NM_005530 AK315963 CR749548 BC021967 AK316051	40866	+	TSC_hg19_v1_chr15_+_78441734 AK222973	40895	+	NM_001101404|SH2D7|646892|SH2 domain containing 7##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2##AK299970|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK296002|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC036227|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##NM_005530|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK315963|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##CR749548|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC021967|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK316051|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK222973|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha	1.098098	CTCF.p2:24:1.000
chr15	40567013	40567130	reg1000047.p1	21.643	+	TSC_hg19_v1_chr15_+_40545348 BC035596	-21705	+	AK095915 NM_001039905 BC171826	-21932	-	NM_020168 AJ236915	-35018	+	NM_001190479	7715	-	BT006905 CU674468 TSC_hg19_v1_chr15_-_40599904 AB209583	32825	-	TSC_hg19_v1_chr15_-_40599986 BC000939	32920	-	BC035596|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AK095915|C15orf56|644809|chromosome 15 open reading frame 56##NM_001039905|C15orf56|644809|chromosome 15 open reading frame 56##NM_020168|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AJ236915|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##NM_001190479|ANKRD63|100131244|ankyrin repeat domain 63##BT006905|PLCB2|5330|phospholipase C, beta 2##AB209583|PLCB2|5330|phospholipase C, beta 2##BC000939|PLCB2|5330|phospholipase C, beta 2	1.990246	CTCF.p2:-20:0.990	CTCF.p2:21:1.000
chr16	68544195	68544308	reg1000020.p2	21.560	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	-61770	-	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	-199292	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	-199425	-	TSC_hg19_v1_chr16_+_68564035 BC040871	19782	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	28947	+	NM_133458	29409	+	AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)##NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)	1.017317	CTCF.p2:0:0.988
chr22	20960618	20960741	reg1000057.p1	21.555	+	TSC_hg19_v1_chr22_+_20918811 U80745	-41855	+	BC017110 TSC_hg19_v1_chr22_+_20909388	-51372	+	AB463109 CU013137 CU013425 AF328769 TSC_hg19_v1_chr22_+_20861965	-98715	+	L36151 NM_002650	128275	-	TSC_hg19_v1_chr22_+_21128411 NM_000185 AK314200 AK225292 BC035028	167717	+	AB384703 TSC_hg19_v1_chr22_-_21213029 AK302424	252351	-	U80745|MED15|51586|mediator complex subunit 15##BC017110|MED15|51586|mediator complex subunit 15##CU013137|MED15|51586|mediator complex subunit 15##CU013425|MED15|51586|mediator complex subunit 15##AF328769|MED15|51586|mediator complex subunit 15##L36151|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_002650|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_000185|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK314200|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK225292|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##BC035028|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK302424|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha	0.697383	CTCF.p2:-6:0.697
chr9	129961617	129961751	reg1000030.p2	21.555	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-76654	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-76722	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-76776	-	NM_032293 AK293732 AK095679	65123	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	197762	+	TSC_hg19_v1_chr9_-_130186602 AK124330	224882	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.066993	
chr17	40474901	40475028	reg1000040.p1	21.548	+	TSC_hg19_v1_chr17_+_40440515 AK301457 BC027036 AB208972 L41142	-34439	+	NM_003152 U43185	-35400	+	TSC_hg19_v1_chr17_-_40428410 U47686 AB208920 BC020868 BC065227 NM_012448	-46532	-	TSC_hg19_v1_chr17_-_40540461 BC014482 NM_213662 BC000627 BC029783 AK297994	65450	-	TSC_hg19_v1_chr17_-_40540493 L29277 NM_003150 NM_139276 AK301200 AK316139	65568	-	TSC_hg19_v1_chr17_-_40540580 AK291933	65628	-	AK301457|STAT5A|6776|signal transducer and activator of transcription 5A##BC027036|STAT5A|6776|signal transducer and activator of transcription 5A##AB208972|STAT5A|6776|signal transducer and activator of transcription 5A##L41142|STAT5A|6776|signal transducer and activator of transcription 5A##NM_003152|STAT5A|6776|signal transducer and activator of transcription 5A##U43185|STAT5A|6776|signal transducer and activator of transcription 5A##U47686|STAT5B|6777|signal transducer and activator of transcription 5B##AB208920|STAT5B|6777|signal transducer and activator of transcription 5B##BC020868|STAT5B|6777|signal transducer and activator of transcription 5B##BC065227|STAT5B|6777|signal transducer and activator of transcription 5B##NM_012448|STAT5B|6777|signal transducer and activator of transcription 5B##BC014482|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_213662|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC000627|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC029783|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK297994|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##L29277|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_003150|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_139276|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK301200|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK316139|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK291933|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	1.043103	CTCF.p2:-26:0.999
chr4	173946354	173946484	reg1000063.p1	21.528	+	NM_001034845 BC047551 BC144036 BC144037 BC063015	-1211775	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-2935005	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-2935221	-	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	143533	+	BC043556 TSC_hg19_v1_chr4_-_174090314	143891	-	BC040577 TSC_hg19_v1_chr4_-_174090813	144388	-	NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.63419	CTCF.p2:-6:0.634
chr11	68868992	68869130	reg1000068.p1	21.519	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-11535	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-52635	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-52711	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	192561	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	586795	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	586849	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.985529	CTCF.p2:-19:0.965
chr7	1032885	1033022	reg1000055.p1	21.508	+	TSC_hg19_v1_chr7_+_1022978 AK000366	-9984	+	TSC_hg19_v1_chr7_+_1022816 BC025761 NM_017781	-10135	+	BC042434 BC053372 TSC_hg19_v1_chr7_-_1015171 BC058158 AK023185 BC110420 BC070383 AK290517 AY957566 BC103632 NM_001031617	-17764	-	TSC_hg19_v1_chr7_-_1067984 L07392 BC025971	35004	-	BC014241 NM_138445 AB464540 DQ892659 DQ895899	64191	+	NM_001039966 NM_001505 AF015257	93523	+	AK000366|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##BC025761|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##NM_017781|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##BC042434|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC053372|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC058158|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK023185|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC110420|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC070383|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK290517|ADAP1|11033|ArfGAP with dual PH domains 1##AY957566|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC103632|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_001031617|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC025971|C7orf50|84310|chromosome 7 open reading frame 50##BC014241|GPR146|115330|G protein-coupled receptor 146##NM_138445|GPR146|115330|G protein-coupled receptor 146##DQ892659|GPR146|115330|G protein-coupled receptor 146##DQ895899|GPR146|115330|G protein-coupled receptor 146##NM_001039966|GPER|2852|G protein-coupled estrogen receptor 1##NM_001505|GPER|2852|G protein-coupled estrogen receptor 1##AF015257|GPER|2852|G protein-coupled estrogen receptor 1	1.144485	CTCF.p2:22:0.967
chr12	50038458	50038574	reg1000024.p1	21.505	+	BC067364 NM_001031698	-14190	+	TSC_hg19_v1_chr12_+_50017344 AK123353 BC050398 AL834216 NM_012272	-21145	+	AM393365 AL136748 BC035621 AK302702 AK093242 AX748009 NM_032130	-39171	-	AB384661 TSC_hg19_v1_chr12_-_50101046	62494	-	TSC_hg19_v1_chr12_-_50101189 AK128195	62642	-	TSC_hg19_v1_chr12_-_50101206 AB095934 BC159100 NM_175736 NM_198900	62696	-	BC067364|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_001031698|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AK123353|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##BC050398|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AL834216|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_012272|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AM393365|FAM186B|84070|family with sequence similarity 186, member B##AL136748|FAM186B|84070|family with sequence similarity 186, member B##BC035621|FAM186B|84070|family with sequence similarity 186, member B##AK302702|FAM186B|84070|family with sequence similarity 186, member B##AK093242|FAM186B|84070|family with sequence similarity 186, member B##NM_032130|FAM186B|84070|family with sequence similarity 186, member B##AK128195|FMNL3|91010|formin-like 3##AB095934|FMNL3|91010|formin-like 3##BC159100|FMNL3|91010|formin-like 3##NM_175736|FMNL3|91010|formin-like 3##NM_198900|FMNL3|91010|formin-like 3	0.999719	CTCF.p2:-7:1.000
chr10	72309755	72309883	reg1000065.p1	21.497	+	TSC_hg19_v1_chr10_+_72238575 NM_014431 AB033100 BC136375 BC136376	-71204	+	TSC_hg19_v1_chr10_-_72201438 BC104976 NM_018055 BC112025	-108368	-	BC033585 TSC_hg19_v1_chr10_-_72201372	-108453	-	BC047695 TSC_hg19_v1_chr10_-_72362497 AK312754	52650	-	BC063043 TSC_hg19_v1_chr10_-_72362518 FJ555237 NM_001083116 NM_005041	52707	-	AB462932 AF358666 AJ345098 NM_080722 NM_139155	122738	+	NM_014431|KIAA1274|27143|KIAA1274##AB033100|KIAA1274|27143|KIAA1274##BC136375|KIAA1274|27143|KIAA1274##BC136376|KIAA1274|27143|KIAA1274##BC104976|NODAL|4838|nodal homolog (mouse)##NM_018055|NODAL|4838|nodal homolog (mouse)##BC112025|NODAL|4838|nodal homolog (mouse)##BC033585|NODAL|4838|nodal homolog (mouse)##BC047695|PRF1|5551|perforin 1 (pore forming protein)##AK312754|PRF1|5551|perforin 1 (pore forming protein)##BC063043|PRF1|5551|perforin 1 (pore forming protein)##FJ555237|PRF1|5551|perforin 1 (pore forming protein)##NM_001083116|PRF1|5551|perforin 1 (pore forming protein)##NM_005041|PRF1|5551|perforin 1 (pore forming protein)##AF358666|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##AJ345098|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_080722|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_139155|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14	1.011443	CTCF.p2:-16:0.999
chr7	3194636	3194759	reg1000048.p1	21.488	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	-111235	-	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-310889	-	AK289723 AB075830 BC146753 NM_133463	-475539	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	146302	+	TSC_hg19_v1_chr7_+_4721925 NM_001037165	1527141	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	1527554	+	AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##NM_001037165|FOXK1|221937|forkhead box K1##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1	0.798218	CTCF.p2:18:0.798
chr12	115100561	115100649	reg1000050.p1	21.478	+	AB051068 AF221714 NM_000192 NM_080717 Y09445	-254387	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-256681	-	NM_080718 U80987 U89353 AB527531 EU446658	-258901	-	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	21535	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	1614345	-	TSC_hg19_v1_chr12_-_116715263 AY338463	1614555	-	AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5##AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like	0.998062	CTCF.p2:-19:0.998
chr1	6306895	6307036	reg1000079.p1	21.436	+	NM_001024598	-2714	+	TSC_hg19_v1_chr1_-_6296121 NM_012405	-10857	-	TSC_hg19_v1_chr1_-_6295993 BC028168 AF064084 AK092890 BC017037	-10955	-	BC068275 NM_207370 TSC_hg19_v1_chr1_-_6321125	14118	-	AB074419 AK291583 NM_181866	112019	-	AB074418 AK292202 NM_181865 AK304465	113777	-	NM_001024598|HES3|390992|hairy and enhancer of split 3 (Drosophila)##NM_012405|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##BC028168|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##AF064084|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##AK092890|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##BC017037|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##BC068275|GPR153|387509|G protein-coupled receptor 153##NM_207370|GPR153|387509|G protein-coupled receptor 153##AB074419|ACOT7|11332|acyl-CoA thioesterase 7##AK291583|ACOT7|11332|acyl-CoA thioesterase 7##NM_181866|ACOT7|11332|acyl-CoA thioesterase 7##AB074418|ACOT7|11332|acyl-CoA thioesterase 7##AK292202|ACOT7|11332|acyl-CoA thioesterase 7##NM_181865|ACOT7|11332|acyl-CoA thioesterase 7	0.997921	CTCF.p2:-9:0.998
chr6	136231046	136231177	reg1000119.p1	21.376	+	AK290582 AB038040 NM_018945 TSC_hg19_v1_chr6_+_136172838 AJ251860 BC070267	-58260	+	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	-412147	+	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	-412226	-	TSC_hg19_v1_chr6_-_136571414 AK292303 BC063688 AK125758 NM_001099286 NM_138419	340318	-	BC078160 BC063846 TSC_hg19_v1_chr6_-_136610926 BX649160 BC016682	379799	-	BC132780 BC144281 BC144282 BC144299 TSC_hg19_v1_chr6_-_136610938 BC047887 BC056894 D79986 NM_001077440 NM_001077441 NM_014739	379849	-	AK290582|PDE7B|27115|phosphodiesterase 7B##AB038040|PDE7B|27115|phosphodiesterase 7B##NM_018945|PDE7B|27115|phosphodiesterase 7B##AJ251860|PDE7B|27115|phosphodiesterase 7B##BC070267|PDE7B|27115|phosphodiesterase 7B##BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##AK292303|FAM54A|113115|family with sequence similarity 54, member A##BC063688|FAM54A|113115|family with sequence similarity 54, member A##AK125758|FAM54A|113115|family with sequence similarity 54, member A##NM_001099286|FAM54A|113115|family with sequence similarity 54, member A##NM_138419|FAM54A|113115|family with sequence similarity 54, member A##BC078160|BCLAF1|9774|BCL2-associated transcription factor 1##BC063846|BCLAF1|9774|BCL2-associated transcription factor 1##BX649160|BCLAF1|9774|BCL2-associated transcription factor 1##BC016682|BCLAF1|9774|BCL2-associated transcription factor 1##BC132780|BCLAF1|9774|BCL2-associated transcription factor 1##BC144281|BCLAF1|9774|BCL2-associated transcription factor 1##BC144282|BCLAF1|9774|BCL2-associated transcription factor 1##BC144299|BCLAF1|9774|BCL2-associated transcription factor 1##BC047887|BCLAF1|9774|BCL2-associated transcription factor 1##BC056894|BCLAF1|9774|BCL2-associated transcription factor 1##D79986|BCLAF1|9774|BCL2-associated transcription factor 1##NM_001077440|BCLAF1|9774|BCL2-associated transcription factor 1##NM_001077441|BCLAF1|9774|BCL2-associated transcription factor 1##NM_014739|BCLAF1|9774|BCL2-associated transcription factor 1	0.852081	CTCF.p2:-1:0.852
chr10	102193636	102193780	reg1000049.p1	21.354	+	AK023036 TSC_hg19_v1_chr10_+_102133657	-60080	+	TSC_hg19_v1_chr10_+_102123601 AF113690	-70196	+	TSC_hg19_v1_chr10_+_102121379 AF109362	-72325	+	Y11094 NM_003393 AB073637	29097	+	AF274863 BX640914 BC044569 BC053949 BC034946 NM_015490 AK289975 BC071580 AK294551	85942	-	CR533490 DQ893286 DQ896618 EU831639 EU831723 TSC_hg19_v1_chr10_-_102289622 AF044958 AK289579 BC000466 BC019276	95907	-	AK023036|LINC00263|90271|long intergenic non-protein coding RNA 263##AF109362|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##Y11094|WNT8B|7479|wingless-type MMTV integration site family, member 8B##NM_003393|WNT8B|7479|wingless-type MMTV integration site family, member 8B##AB073637|WNT8B|7479|wingless-type MMTV integration site family, member 8B##AF274863|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BX640914|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC044569|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC053949|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC034946|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##NM_015490|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##AK289975|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC071580|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##AK294551|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##CR533490|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##DQ893286|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##DQ896618|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##EU831639|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##EU831723|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF044958|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AK289579|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##BC000466|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##BC019276|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa	1.124115	CTCF.p2:-27:0.913	CTCF.p2:60:0.211
chr8	142441682	142441808	reg1000076.p1	21.335	+	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	-9684	+	TSC_hg19_v1_chr8_+_142402120 AK311257	-39611	+	NM_005293	-64381	-	BC144560 AK125848 AK131461 NM_207414	75572	-	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	1042792	-	AB005297 NM_001702	1103631	+	BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_005293|GPR20|2843|G protein-coupled receptor 20##BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1	0.999897	CTCF.p2:3:1.000
chr3	46530302	46530435	reg1000051.p1	21.323	+	M83205 X52941 AF332168 AY137470 AY178998 AY875691 DQ522304 EU779935 AB527812 AY360320 DQ892855 DQ896102 M83202 M93150 AY165046 AK290859 AK292813 AK303889 BC015822 BC022347 BC015823 AY493417 NM_002343 X53961	-23871	-	AK316330 U84119 AK298035 NM_001199149	-25250	-	AF015525 NM_003965 AF014958 BC071682 BC025717 BC096075 BC096076 BC099623 AK296673 NM_001130910 AK313312 AF015524	-81472	+	AJ312776 NM_031440 BC131756 AY562237	9150	+	NM_024512	77671	-	NM_001174136	85676	+	M83205|LTF|4057|lactotransferrin##X52941|LTF|4057|lactotransferrin##AF332168|LTF|4057|lactotransferrin##AY137470|LTF|4057|lactotransferrin##AY178998|LTF|4057|lactotransferrin##AY875691|LTF|4057|lactotransferrin##DQ522304|LTF|4057|lactotransferrin##EU779935|LTF|4057|lactotransferrin##AY360320|LTF|4057|lactotransferrin##DQ892855|LTF|4057|lactotransferrin##DQ896102|LTF|4057|lactotransferrin##M83202|LTF|4057|lactotransferrin##M93150|LTF|4057|lactotransferrin##AY165046|LTF|4057|lactotransferrin##AK290859|LTF|4057|lactotransferrin##AK292813|LTF|4057|lactotransferrin##AK303889|LTF|4057|lactotransferrin##BC015822|LTF|4057|lactotransferrin##BC022347|LTF|4057|lactotransferrin##BC015823|LTF|4057|lactotransferrin##AY493417|LTF|4057|lactotransferrin##NM_002343|LTF|4057|lactotransferrin##X53961|LTF|4057|lactotransferrin##AK316330|LTF|4057|lactotransferrin##U84119|LTF|4057|lactotransferrin##AK298035|LTF|4057|lactotransferrin##NM_001199149|LTF|4057|lactotransferrin##AF015525|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_003965|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC071682|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC096075|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC096076|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK296673|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_001130910|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK313312|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AF015524|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AJ312776|RTP3|83597|receptor (chemosensory) transporter protein 3##NM_031440|RTP3|83597|receptor (chemosensory) transporter protein 3##BC131756|RTP3|83597|receptor (chemosensory) transporter protein 3##AY562237|RTP3|83597|receptor (chemosensory) transporter protein 3##NM_024512|LRRC2|79442|leucine rich repeat containing 2##NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1	1.272519	CTCF.p2:-31:0.627	CTCF.p2:32:0.645
chr11	63246422	63246552	reg1000064.p1	21.315	+	AK074246 BC022379 NM_080866 AB074812 AF440402 BC126288 AB062418 AJ295270 CU692590 HQ258285	-109093	+	AK298430 AB075876 NM_001039752	-189087	+	AK127610 BC101315 BC101314 AY437532 BC101316 BC101317 NM_199352	-249427	-	AK055392 AB298804 BC034222 AK302312 AJ416558 NM_001146728 NM_001146729 NM_054108	12057	-	AK313851 NM_001142535 NM_001142536 NM_033101 TSC_hg19_v1_chr11_+_63273527	27038	+	AF244974 AF244976 TSC_hg19_v1_chr11_+_63273565 BC028222	27093	+	AK074246|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##BC022379|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##NM_080866|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AB074812|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AF440402|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##BC126288|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AB062418|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AJ295270|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##HQ258285|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AK298430|SLC22A10|387775|solute carrier family 22, member 10##AB075876|SLC22A10|387775|solute carrier family 22, member 10##NM_001039752|SLC22A10|387775|solute carrier family 22, member 10##AK127610|SLC22A25|387601|solute carrier family 22, member 25##BC101315|SLC22A25|387601|solute carrier family 22, member 25##BC101314|SLC22A25|387601|solute carrier family 22, member 25##AY437532|SLC22A25|387601|solute carrier family 22, member 25##BC101316|SLC22A25|387601|solute carrier family 22, member 25##BC101317|SLC22A25|387601|solute carrier family 22, member 25##NM_199352|SLC22A25|387601|solute carrier family 22, member 25##AK055392|HRASLS5|117245|HRAS-like suppressor family, member 5##AB298804|HRASLS5|117245|HRAS-like suppressor family, member 5##BC034222|HRASLS5|117245|HRAS-like suppressor family, member 5##AK302312|HRASLS5|117245|HRAS-like suppressor family, member 5##AJ416558|HRASLS5|117245|HRAS-like suppressor family, member 5##NM_001146728|HRASLS5|117245|HRAS-like suppressor family, member 5##NM_001146729|HRASLS5|117245|HRAS-like suppressor family, member 5##NM_054108|HRASLS5|117245|HRAS-like suppressor family, member 5##AK313851|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142535|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142536|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_033101|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AF244974|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AF244976|LGALS12|85329|lectin, galactoside-binding, soluble, 12##BC028222|LGALS12|85329|lectin, galactoside-binding, soluble, 12	0.924104	CTCF.p2:-20:0.924
chr9	36555943	36556059	reg1000043.p1	21.202	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-154826	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-155104	-	AL136817 BC033786 NM_022781 NM_194329	-155748	-	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	16923	+	TSC_hg19_v1_chr9_-_37034361 NM_016734	478415	-	TSC_hg19_v1_chr9_+_37079908 AK091718	523905	+	NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##AL136817|RNF38|152006|ring finger protein 38##BC033786|RNF38|152006|ring finger protein 38##NM_022781|RNF38|152006|ring finger protein 38##NM_194329|RNF38|152006|ring finger protein 38##AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.949694	CTCF.p2:14:0.268	CTCF.p2:15:0.681
chr2	127285799	127285926	reg1000087.p1	21.127	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2502998	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-4772625	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-4791397	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	127845	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	127930	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	578879	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.976739	CTCF.p2:-6:0.977
chr11	60897350	60897481	reg1000052.p1	21.117	+	NM_014207 AY541703 TSC_hg19_v1_chr11_+_60869960 AK292698 X04391 BC027901 DQ892077 DQ895270	-27436	+	NM_006725 TSC_hg19_v1_chr11_+_60739236 AK128419 AK312749 BC078669 BC033755 X60992 AK292704 DQ786329 DQ786330 U66142 U66145 U66146	-158190	+	BC037974 BC025710 AF135600 AB020598 NM_016582	-178229	-	BC141827 BC142702 AK097326 TSC_hg19_v1_chr11_-_60928910 NM_017966 AL834261 AK302384	31515	-	NM_001079807 AK301286 AK301293 AK301305 AK312941 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	73593	+	AK301305 AK312941 NM_001079808 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	92430	+	NM_014207|CD5|921|CD5 molecule##AY541703|CD5|921|CD5 molecule##AK292698|CD5|921|CD5 molecule##X04391|CD5|921|CD5 molecule##BC027901|CD5|921|CD5 molecule##DQ892077|CD5|921|CD5 molecule##DQ895270|CD5|921|CD5 molecule##NM_006725|CD6|923|CD6 molecule##AK128419|CD6|923|CD6 molecule##AK312749|CD6|923|CD6 molecule##BC078669|CD6|923|CD6 molecule##BC033755|CD6|923|CD6 molecule##X60992|CD6|923|CD6 molecule##AK292704|CD6|923|CD6 molecule##DQ786329|CD6|923|CD6 molecule##DQ786330|CD6|923|CD6 molecule##U66142|CD6|923|CD6 molecule##U66145|CD6|923|CD6 molecule##U66146|CD6|923|CD6 molecule##BC037974|SLC15A3|51296|solute carrier family 15, member 3##BC025710|SLC15A3|51296|solute carrier family 15, member 3##AF135600|SLC15A3|51296|solute carrier family 15, member 3##AB020598|SLC15A3|51296|solute carrier family 15, member 3##NM_016582|SLC15A3|51296|solute carrier family 15, member 3##BC141827|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##BC142702|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK097326|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_017966|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AL834261|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK302384|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_001079807|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301286|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301293|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##NM_001079808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)	1.013498	CTCF.p2:18:0.201	CTCF.p2:-31:0.799
chr7	73482295	73482401	reg1000036.p1	21.096	+	BX538199 BC065566 AB208942 BX537939 BC050379 TSC_hg19_v1_chr7_+_73442502 AK094138 AK095990 AK122731 AK225659 AK092232 AX747420 BC035570 AM393341	-39847	+	TSC_hg19_v1_chr7_+_73442469 M36860 X52896	-39879	+	TSC_hg19_v1_chr7_+_73442462 AK125511 AK130894	-39892	+	AK290162 NM_002314 TSC_hg19_v1_chr7_+_73498133	15778	+	TSC_hg19_v1_chr7_+_73498160 D26309	15807	+	TSC_hg19_v1_chr7_+_73498325 AB385563 AF134379	15986	+	BX538199|ELN|2006|elastin##BC065566|ELN|2006|elastin##AB208942|ELN|2006|elastin##BX537939|ELN|2006|elastin##BC050379|ELN|2006|elastin##AK094138|ELN|2006|elastin##AK095990|ELN|2006|elastin##AK122731|ELN|2006|elastin##AK225659|ELN|2006|elastin##AK092232|ELN|2006|elastin##BC035570|ELN|2006|elastin##AM393341|ELN|2006|elastin##M36860|ELN|2006|elastin##X52896|ELN|2006|elastin##AK125511|ELN|2006|elastin##AK130894|ELN|2006|elastin##AK290162|LIMK1|3984|LIM domain kinase 1##NM_002314|LIMK1|3984|LIM domain kinase 1##D26309|LIMK1|3984|LIM domain kinase 1##AF134379|LIMK1|3984|LIM domain kinase 1	0.991294	CTCF.p2:-5:0.991
chr7	98062774	98062867	reg1000038.p2	21.068	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-32387	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-32526	-	TSC_hg19_v1_chr7_-_98015920 D28374	-46906	-	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	183916	+	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	404710	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	404807	-	NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##D28374|RPS3A|6189|ribosomal protein S3A##NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130	1.446909	CTCF.p2:-17:0.744
chr17	61996713	61996847	reg1000078.p1	21.063	+	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	-614	-	BC119747 BC029365 NM_001318 NM_022579 NM_022580 NM_022581 AX772828	-8123	-	BT006926 J00118 BC002717 AK291587 BC005921 BC057768 BC062775 BC020756 NM_001317 M35419	-22829	-	S52229 S79249 X83539 M80461 BC032651 BC002975 BC030210 AX775815 AX775817 AK222954 AK313583 AK223210 NM_000626 NM_001039933 NM_021602 M89957	12886	-	AY212253 M81758 NM_000334	53458	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	78982	+	M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1##BC119747|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BC029365|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_001318|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022579|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022580|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022581|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BT006926|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##J00118|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC002717|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##AK291587|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC005921|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC057768|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC062775|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC020756|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##NM_001317|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##S52229|CD79B|974|CD79b molecule, immunoglobulin-associated beta##S79249|CD79B|974|CD79b molecule, immunoglobulin-associated beta##X83539|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M80461|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC032651|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC002975|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC030210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775815|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775817|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK222954|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK313583|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK223210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_000626|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_001039933|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_021602|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M89957|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72	0.370898	CTCF.p2:-23:0.371
chr22	45131837	45131967	reg1000127.p1	21.060	+	AK291564 TSC_hg19_v1_chr22_+_45098246 AF177331 AL355192 NM_181334	-33649	+	TSC_hg19_v1_chr22_+_45098090 NM_181333	-33834	+	AK091884 TSC_hg19_v1_chr22_+_45072964 AK055848	-58932	+	AK001306 NM_001017526 NM_001198726 NM_181335 BC059382 BC067824 BC048280	16559	+	TSC_hg19_v1_chr22_-_45404785 AK299836 AK297317 AK091480 AX747013 NM_001242450	272927	-	AB489146 CU012999 CU013287 CU680262 CR456448 BC012187 NM_138415	273602	-	AK291564|PRR5|55615|proline rich 5 (renal)##AF177331|PRR5|55615|proline rich 5 (renal)##AL355192|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181334|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181333|PRR5|55615|proline rich 5 (renal)##AK091884|PRR5|55615|proline rich 5 (renal)##AK055848|PRR5|55615|proline rich 5 (renal)##AK001306|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001017526|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001198726|ARHGAP8|23779|Rho GTPase activating protein 8##NM_181335|ARHGAP8|23779|Rho GTPase activating protein 8##BC059382|ARHGAP8|23779|Rho GTPase activating protein 8##BC067824|ARHGAP8|23779|Rho GTPase activating protein 8##BC048280|ARHGAP8|23779|Rho GTPase activating protein 8##AK299836|PHF21B|112885|PHD finger protein 21B##AK297317|PHF21B|112885|PHD finger protein 21B##AK091480|PHF21B|112885|PHD finger protein 21B##NM_001242450|PHF21B|112885|PHD finger protein 21B##CU012999|PHF21B|112885|PHD finger protein 21B##CU013287|PHF21B|112885|PHD finger protein 21B##CR456448|PHF21B|112885|PHD finger protein 21B##BC012187|PHF21B|112885|PHD finger protein 21B##NM_138415|PHF21B|112885|PHD finger protein 21B	0.999322	CTCF.p2:5:0.999
chr5	133519993	133520099	reg1000070.p1	21.041	+	TSC_hg19_v1_chr5_-_133512642 Z47087 BC020798 NM_006930 NM_170679	-7364	-	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	-7423	-	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	-68685	+	AB451240 AB451365 CR457417 AB385080 X12646 TSC_hg19_v1_chr5_-_133561733 J03804	41598	-	TSC_hg19_v1_chr5_-_133561763 BC000400 BC002657 BC019275 BC031696 AK057424 AK097599	41709	-	TSC_hg19_v1_chr5_-_133561906 NM_002715	41857	-	Z47087|SKP1|6500|S-phase kinase-associated protein 1##BC020798|SKP1|6500|S-phase kinase-associated protein 1##NM_006930|SKP1|6500|S-phase kinase-associated protein 1##NM_170679|SKP1|6500|S-phase kinase-associated protein 1##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1##NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AB451240|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AB451365|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##CR457417|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##X12646|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##J03804|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC000400|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC002657|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC019275|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC031696|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AK057424|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AK097599|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##NM_002715|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme	0.993174	CTCF.p2:-5:0.993
chr8	28277132	28277277	reg1000080.p1	21.038	+	AK002050 AK023418 NM_018660 AB057659 AB073627	-33243	-	BC001237 TSC_hg19_v1_chr8_-_28243694	-33562	-	NM_006228 U48263 TSC_hg19_v1_chr8_+_28174784 AK289633 AY335948 BC034758	-102479	+	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	70575	-	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	74561	+	TSC_hg19_v1_chr8_+_28559032 AB011091	281871	+	AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##BC001237|ZNF395|55893|zinc finger protein 395##NM_006228|PNOC|5368|prepronociceptin##U48263|PNOC|5368|prepronociceptin##AK289633|PNOC|5368|prepronociceptin##AY335948|PNOC|5368|prepronociceptin##BC034758|PNOC|5368|prepronociceptin##BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16##NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##AB011091|EXTL3|2137|exostoses (multiple)-like 3	0.930855	CTCF.p2:20:0.931
chr12	53746511	53746645	reg1000060.p1	21.015	+	AY150674 NM_001173467	-16575	-	AB527932 EU446563 BC101549 BC113613 AY150673 AF477981 NM_152860 AF466179	-17095	-	TSC_hg19_v1_chr12_-_53715374 AK293342 BC000659 BC018836 AY237818 NM_001173466 NM_015665	-31201	-	TSC_hg19_v1_chr12_+_53773935 BC062539 NM_001251825 NM_138473 AF255682 AJ272134	27412	+	BC043224 NM_003109	27846	+	NM_001164690 NM_001164691 NM_020547 AK313593 AF172932 BC126316 BC136356 AY714878 HQ258327	71100	+	AY150674|SP7|121340|Sp7 transcription factor##NM_001173467|SP7|121340|Sp7 transcription factor##EU446563|SP7|121340|Sp7 transcription factor##BC101549|SP7|121340|Sp7 transcription factor##BC113613|SP7|121340|Sp7 transcription factor##AY150673|SP7|121340|Sp7 transcription factor##AF477981|SP7|121340|Sp7 transcription factor##NM_152860|SP7|121340|Sp7 transcription factor##AF466179|SP7|121340|Sp7 transcription factor##AK293342|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BC000659|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BC018836|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AY237818|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##NM_001173466|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##NM_015665|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BC062539|SP1|6667|Sp1 transcription factor##NM_001251825|SP1|6667|Sp1 transcription factor##NM_138473|SP1|6667|Sp1 transcription factor##AF255682|SP1|6667|Sp1 transcription factor##AJ272134|SP1|6667|Sp1 transcription factor##BC043224|SP1|6667|Sp1 transcription factor##NM_003109|SP1|6667|Sp1 transcription factor##NM_001164690|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_001164691|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_020547|AMHR2|269|anti-Mullerian hormone receptor, type II##AK313593|AMHR2|269|anti-Mullerian hormone receptor, type II##AF172932|AMHR2|269|anti-Mullerian hormone receptor, type II##BC126316|AMHR2|269|anti-Mullerian hormone receptor, type II##BC136356|AMHR2|269|anti-Mullerian hormone receptor, type II##AY714878|AMHR2|269|anti-Mullerian hormone receptor, type II##HQ258327|AMHR2|269|anti-Mullerian hormone receptor, type II	0.999244	CTCF.p2:-14:0.988
chr22	41799923	41800060	reg1000095.p1	21.014	+	TSC_hg19_v1_chr22_+_41777945 BC042476 NM_003216 BC039258 U44059 AK314906 AK295595 HM370396 CR456592 CU013192 CU013480 DQ890611 DQ893781 CR541827 CU691698 U06935	-21963	+	TSC_hg19_v1_chr22_+_41763458 NM_001145398 AK091916 AB051442 AB385204	-36575	+	TSC_hg19_v1_chr22_+_41697583 AF188530 AK023849	-102341	+	TSC_hg19_v1_chr22_-_41842432 CR456594	42464	-	TSC_hg19_v1_chr22_-_41842785 BC028919 AB051450 BC038957	42791	-	TSC_hg19_v1_chr22_-_41842881 NM_016272	42948	-	BC042476|TEF|7008|thyrotrophic embryonic factor##NM_003216|TEF|7008|thyrotrophic embryonic factor##BC039258|TEF|7008|thyrotrophic embryonic factor##U44059|TEF|7008|thyrotrophic embryonic factor##AK314906|TEF|7008|thyrotrophic embryonic factor##AK295595|TEF|7008|thyrotrophic embryonic factor##HM370396|TEF|7008|thyrotrophic embryonic factor##CR456592|TEF|7008|thyrotrophic embryonic factor##CU013192|TEF|7008|thyrotrophic embryonic factor##CU013480|TEF|7008|thyrotrophic embryonic factor##DQ890611|TEF|7008|thyrotrophic embryonic factor##DQ893781|TEF|7008|thyrotrophic embryonic factor##CR541827|TEF|7008|thyrotrophic embryonic factor##U06935|TEF|7008|thyrotrophic embryonic factor##NM_001145398|TEF|7008|thyrotrophic embryonic factor##AK091916|TEF|7008|thyrotrophic embryonic factor##AB051442|TEF|7008|thyrotrophic embryonic factor##AF188530|ZC3H7B|23264|zinc finger CCCH-type containing 7B##AK023849|ZC3H7B|23264|zinc finger CCCH-type containing 7B##CR456594|TOB2|10766|transducer of ERBB2, 2##BC028919|TOB2|10766|transducer of ERBB2, 2##AB051450|TOB2|10766|transducer of ERBB2, 2##BC038957|TOB2|10766|transducer of ERBB2, 2##NM_016272|TOB2|10766|transducer of ERBB2, 2	0.993468	CTCF.p2:-10:0.993
chr17	74275674	74275791	reg1000077.p1	20.956	+	TSC_hg19_v1_chr17_+_74261431 BC035511 EU176314	-14225	+	TSC_hg19_v1_chr17_+_74261282 BC060859 NM_182565	-14448	+	AK091467 AX747002 AB067504 NM_052916 TSC_hg19_v1_chr17_-_74236615	-39284	-	EU832276 EU832361 BC131559 AL136774 NM_032134	27938	-	TSC_hg19_v1_chr17_-_74349591 CU679229 BC009012	73917	-	TSC_hg19_v1_chr17_-_74349948 D61391 AK312637	74197	-	BC035511|FAM100B|283991|family with sequence similarity 100, member B##EU176314|FAM100B|283991|family with sequence similarity 100, member B##BC060859|FAM100B|283991|family with sequence similarity 100, member B##NM_182565|FAM100B|283991|family with sequence similarity 100, member B##AK091467|RNF157|114804|ring finger protein 157##AB067504|RNF157|114804|ring finger protein 157##NM_052916|RNF157|114804|ring finger protein 157##EU832276|QRICH2|84074|glutamine rich 2##EU832361|QRICH2|84074|glutamine rich 2##BC131559|QRICH2|84074|glutamine rich 2##AL136774|QRICH2|84074|glutamine rich 2##NM_032134|QRICH2|84074|glutamine rich 2##BC009012|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1##D61391|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1##AK312637|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1	0.998947	CTCF.p2:16:0.999
chr18	74695380	74695499	reg1000059.p2	20.941	+	BC130034 TSC_hg19_v1_chr18_-_74692098	-3409	-	AF085243 AF085244 NM_007345	-159324	+	TSC_hg19_v1_chr18_+_74534512 BX648028	-160929	+	AK074315 TSC_hg19_v1_chr18_-_74728814	33317	-	CR536534 CR541919 TSC_hg19_v1_chr18_-_74729012 AK296492 M30515 M30516 BC008749 BC101771 BC101773 BC143348 BC143350 M30047 BC080654 M13577 AK289893 AK098402 AK128788 CR627018 AK128770 BC068550	33556	-	TSC_hg19_v1_chr18_-_74729052 AK314553 NM_001025081 NM_001025090 NM_001025092 NM_002385 AK293922	33628	-	BC130034|MBP|4155|myelin basic protein##AF085243|ZNF236|7776|zinc finger protein 236##AF085244|ZNF236|7776|zinc finger protein 236##NM_007345|ZNF236|7776|zinc finger protein 236##BX648028|ZNF236|7776|zinc finger protein 236##AK074315|MBP|4155|myelin basic protein##CR536534|MBP|4155|myelin basic protein##CR541919|MBP|4155|myelin basic protein##M30515|MBP|4155|myelin basic protein##M30516|MBP|4155|myelin basic protein##BC008749|MBP|4155|myelin basic protein##BC101771|MBP|4155|myelin basic protein##BC101773|MBP|4155|myelin basic protein##BC143348|MBP|4155|myelin basic protein##BC143350|MBP|4155|myelin basic protein##M30047|MBP|4155|myelin basic protein##BC080654|MBP|4155|myelin basic protein##M13577|MBP|4155|myelin basic protein##AK289893|MBP|4155|myelin basic protein##AK098402|MBP|4155|myelin basic protein##AK128788|MBP|4155|myelin basic protein##CR627018|MBP|4155|myelin basic protein##AK128770|MBP|4155|myelin basic protein##BC068550|MBP|4155|myelin basic protein##AK314553|MBP|4155|myelin basic protein##NM_001025081|MBP|4155|myelin basic protein##NM_001025090|MBP|4155|myelin basic protein##NM_001025092|MBP|4155|myelin basic protein##NM_002385|MBP|4155|myelin basic protein##AK293922|MBP|4155|myelin basic protein	0.998582	CTCF.p2:-4:0.999
chr11	119979019	119979141	reg1000084.p1	20.921	+	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	-379698	-	BC037832 NM_006288	-684837	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-685171	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	20466	-	AK299472 TSC_hg19_v1_chr11_-_120008323	29192	-	AB464321 CU675956 EU446943 TSC_hg19_v1_chr11_-_120008772	29675	-	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29##EU446943|TRIM29|23650|tripartite motif containing 29	0.954885	CTCF.p2:10:0.955
chr17	61502907	61503019	reg1000026.p1	20.892	+	BC144357 TSC_hg19_v1_chr17_+_61271368	-231602	+	NM_025185	-416066	+	AK122947 AK093076 AX747906 BX648705 NM_152598	-617286	-	BC091485 NM_001017917	15227	-	AK095244 NM_001017916 TSC_hg19_v1_chr17_-_61523715 AK301541 AK294403 BC002976 AK303177 AK316606 NM_001915	20673	-	TSC_hg19_v1_chr17_+_61554421 AK296566 AK309514 NM_000789 AK300516 AB208971 J04144	51465	+	BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC091485|CYB561|1534|cytochrome b-561##NM_001017917|CYB561|1534|cytochrome b-561##AK095244|CYB561|1534|cytochrome b-561##NM_001017916|CYB561|1534|cytochrome b-561##AK301541|CYB561|1534|cytochrome b-561##AK294403|CYB561|1534|cytochrome b-561##BC002976|CYB561|1534|cytochrome b-561##AK303177|CYB561|1534|cytochrome b-561##AK316606|CYB561|1534|cytochrome b-561##NM_001915|CYB561|1534|cytochrome b-561##AK296566|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK309514|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##NM_000789|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK300516|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AB208971|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##J04144|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	0.982043	CTCF.p2:-26:0.982
chr2	113484386	113484508	reg1000045.p2	20.856	+	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	-80927	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-142258	+	TSC_hg19_v1_chr2_+_113342023 AK024631 BC004498 NM_032309 AK312219	-142409	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	37775	-	NM_000575 BC035169	58525	-	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	109897	-	NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BC004498|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_032309|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK312219|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta	0.999833	CTCF.p2:32:1.000
chr8	42547760	42547891	reg1000029.p1	20.853	+	TSC_hg19_v1_chr8_-_42397069 BC028600 NM_006749	-150764	-	TSC_hg19_v1_chr8_+_42396791 NM_138436 BC013035 NM_001135674 NM_001135675	-150998	+	TSC_hg19_v1_chr8_-_42396648 AK314774	-151174	-	BC069681 BC069703 BC069788 NM_000749 Y08417 U62438 CU686976 CU686982	4800	+	NM_001199279 NM_004198	76103	-	AL832077 BC021721 AK223231 TSC_hg19_v1_chr8_-_42698469 AK001339 NM_018105 NM_199003	150636	-	BC028600|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##NM_006749|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##NM_138436|C8orf40|114926|chromosome 8 open reading frame 40##BC013035|C8orf40|114926|chromosome 8 open reading frame 40##NM_001135674|C8orf40|114926|chromosome 8 open reading frame 40##NM_001135675|C8orf40|114926|chromosome 8 open reading frame 40##AK314774|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##BC069681|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##BC069703|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##BC069788|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##NM_000749|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##Y08417|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##U62438|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##NM_001199279|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6##NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6##AL832077|THAP1|55145|THAP domain containing, apoptosis associated protein 1##BC021721|THAP1|55145|THAP domain containing, apoptosis associated protein 1##AK223231|THAP1|55145|THAP domain containing, apoptosis associated protein 1##AK001339|THAP1|55145|THAP domain containing, apoptosis associated protein 1##NM_018105|THAP1|55145|THAP domain containing, apoptosis associated protein 1##NM_199003|THAP1|55145|THAP domain containing, apoptosis associated protein 1	0.999232	CTCF.p2:-11:0.999
chr17	4316574	4316719	reg1000058.p2	20.851	+	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	-46738	-	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	-46935	-	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	-149495	-	AK172832 NM_182538 TSC_hg19_v1_chr17_+_4337247 BC023646	20596	+	NM_001124758 BC041772 TSC_hg19_v1_chr17_+_4402177 AB441165	85590	+	EU832503 BC050546 TSC_hg19_v1_chr17_-_4458680 AF147709 AK303150 AK301622 AK307948 NM_001105538 NM_014520	142028	-	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK172832|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_182538|SPNS3|201305|spinster homolog 3 (Drosophila)##BC023646|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_001124758|SPNS2|124976|spinster homolog 2 (Drosophila)##BC041772|SPNS2|124976|spinster homolog 2 (Drosophila)##AB441165|SPNS2|124976|spinster homolog 2 (Drosophila)##EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a##BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a##AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a##AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a##AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a##AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a	0.999922	CTCF.p2:28:1.000
chr14	70494632	70494767	reg1000092.p1	20.850	+	NM_001034852 NM_022137 TSC_hg19_v1_chr14_+_70346132 AK289988 AK313063 AJ249900 BC011548 BC008608	-148570	+	CU687020 HQ258189 BC074724 BC126298 BC136355 AY544127 BC069822 BC069799 L21893 AK314028 NM_003049	-230761	-	AF070562 TSC_hg19_v1_chr14_+_70236305	-258412	+	AK096553 AJ745101 AJ745102 BC114217 NM_182936 AK122728 BC142969 NM_001130417	52193	-	BC036783 BX248763 TSC_hg19_v1_chr14_-_70655669 AF510501 AF510502 AF510503 NM_033262 NM_058240 NM_182932 NM_183002	160988	-	CR457199 AB528661 CU674840 BC001702 TSC_hg19_v1_chr14_-_70826389	331647	-	NM_001034852|SMOC1|64093|SPARC related modular calcium binding 1##NM_022137|SMOC1|64093|SPARC related modular calcium binding 1##AK289988|SMOC1|64093|SPARC related modular calcium binding 1##AK313063|SMOC1|64093|SPARC related modular calcium binding 1##AJ249900|SMOC1|64093|SPARC related modular calcium binding 1##BC011548|SMOC1|64093|SPARC related modular calcium binding 1##BC008608|SMOC1|64093|SPARC related modular calcium binding 1##HQ258189|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC074724|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC126298|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC136355|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AY544127|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC069822|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC069799|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##L21893|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AK314028|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##NM_003049|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AF070562|SRSF5|6430|serine/arginine-rich splicing factor 5##AK096553|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745101|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745102|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC114217|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182936|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AK122728|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC142969|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_001130417|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC036783|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BX248763|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510501|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510502|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510503|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_033262|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_058240|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182932|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_183002|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##CR457199|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC001702|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	0.997543	CTCF.p2:16:0.998
chr1	17563650	17563771	reg1000090.p1	20.818	+	AK314644 AK026652 AK225541 NM_013358 AB033768 BC130574 BC136402 HQ258487	-32045	+	AB587350 AB023211 AB030176 BC009701 TSC_hg19_v1_chr1_-_17445947 AK295783 NM_007365	-117803	-	DQ403007 TSC_hg19_v1_chr1_-_17380528 AK312056 U17248 BC007840 NM_003000	-183135	-	AB026831 NM_016233 BC109091 BC041592 BC109092	11889	+	AF229067 AK314839 NM_012387 AB017919 AK290507 AK309637 BC025718 AB527709 CU693030	70993	+	AY443100 AB527380 AY422079 NM_207421	135005	+	AK314644|PADI1|29943|peptidyl arginine deiminase, type I##AK026652|PADI1|29943|peptidyl arginine deiminase, type I##AK225541|PADI1|29943|peptidyl arginine deiminase, type I##NM_013358|PADI1|29943|peptidyl arginine deiminase, type I##AB033768|PADI1|29943|peptidyl arginine deiminase, type I##BC130574|PADI1|29943|peptidyl arginine deiminase, type I##BC136402|PADI1|29943|peptidyl arginine deiminase, type I##HQ258487|PADI1|29943|peptidyl arginine deiminase, type I##AB023211|PADI2|11240|peptidyl arginine deiminase, type II##AB030176|PADI2|11240|peptidyl arginine deiminase, type II##BC009701|PADI2|11240|peptidyl arginine deiminase, type II##AK295783|PADI2|11240|peptidyl arginine deiminase, type II##NM_007365|PADI2|11240|peptidyl arginine deiminase, type II##DQ403007|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AK312056|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##U17248|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##BC007840|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##NM_003000|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AB026831|PADI3|51702|peptidyl arginine deiminase, type III##NM_016233|PADI3|51702|peptidyl arginine deiminase, type III##BC109091|PADI3|51702|peptidyl arginine deiminase, type III##BC041592|PADI3|51702|peptidyl arginine deiminase, type III##BC109092|PADI3|51702|peptidyl arginine deiminase, type III##AF229067|PADI4|23569|peptidyl arginine deiminase, type IV##AK314839|PADI4|23569|peptidyl arginine deiminase, type IV##NM_012387|PADI4|23569|peptidyl arginine deiminase, type IV##AB017919|PADI4|23569|peptidyl arginine deiminase, type IV##AK290507|PADI4|23569|peptidyl arginine deiminase, type IV##AK309637|PADI4|23569|peptidyl arginine deiminase, type IV##BC025718|PADI4|23569|peptidyl arginine deiminase, type IV##AY443100|PADI6|353238|peptidyl arginine deiminase, type VI##AY422079|PADI6|353238|peptidyl arginine deiminase, type VI##NM_207421|PADI6|353238|peptidyl arginine deiminase, type VI	0.99961	CTCF.p2:14:1.000
chr17	29852470	29852598	reg1000109.p1	20.742	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-37473	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-133670	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-133867	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	333737	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	376132	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	376197	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	1.704338	CTCF.p2:15:0.991	CTCF.p2:40:0.713
chr15	74731166	74731291	reg1000091.p1	20.735	+	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	-4916	-	NM_001146030 TSC_hg19_v1_chr15_-_74726050	-5199	-	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-71225	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	22219	-	TSC_hg19_v1_chr15_-_74753521 BC030055 NM_032907 NM_201265	22284	-	TSC_hg19_v1_chr15_+_74753647 BC014373 AF085896	22423	+	AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC030055|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##NM_032907|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##NM_201265|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC014373|LOC440288|440288|uncharacterized LOC440288##AF085896|LOC440288|440288|uncharacterized LOC440288	0.999931	CTCF.p2:11:1.000
chr14	105442570	105442690	reg1000067.p2	20.718	+	TSC_hg19_v1_chr14_-_105436817 BC004283 AK094143	-5810	-	TSC_hg19_v1_chr14_+_105391215 AK090449 BC015003	-51405	+	TSC_hg19_v1_chr14_+_105391174 AY358843 NM_138790	-51454	+	NM_138420 TSC_hg19_v1_chr14_-_105444718	2078	-	AK057249 NM_174891 BC137495 BC144671	10013	+	TSC_hg19_v1_chr14_-_105487410 AF322239 BC011736 BC025263	44757	-	BC004283|AHNAK2|113146|AHNAK nucleoprotein 2##AK094143|AHNAK2|113146|AHNAK nucleoprotein 2##BC015003|PLD4|122618|phospholipase D family, member 4##AY358843|PLD4|122618|phospholipase D family, member 4##NM_138790|PLD4|122618|phospholipase D family, member 4##NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2##AK057249|C14orf79|122616|chromosome 14 open reading frame 79##NM_174891|C14orf79|122616|chromosome 14 open reading frame 79##BC137495|C14orf79|122616|chromosome 14 open reading frame 79##BC144671|C14orf79|122616|chromosome 14 open reading frame 79##AF322239|CDCA4|55038|cell division cycle associated 4##BC011736|CDCA4|55038|cell division cycle associated 4##BC025263|CDCA4|55038|cell division cycle associated 4	1.214235	CTCF.p2:-8:1.000	CTCF.p2:23:0.214
chr9	137335274	137335403	reg1000123.p1	20.708	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-116938	+	TSC_hg19_v1_chr9_+_137218317 BC063827 NM_002957	-117023	+	AJ011376 NM_052821 AB464354	-330384	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	198309	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	198472	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	437322	+	BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##BC063827|RXRA|6256|retinoid X receptor, alpha##NM_002957|RXRA|6256|retinoid X receptor, alpha##AJ011376|WDR5|11091|WD repeat domain 5##NM_052821|WDR5|11091|WD repeat domain 5##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##D90279|COL5A1|1289|collagen, type V, alpha 1##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	0.998723	CTCF.p2:8:0.999
chr19	38826240	38826358	reg1000093.p1	20.691	+	AK022344 TSC_hg19_v1_chr19_+_38810861	-15492	+	TSC_hg19_v1_chr19_+_38810572 BC004367 DQ893422 DQ896740 CU678688	-15733	+	TSC_hg19_v1_chr19_+_38810523 EU978937	-15773	+	NM_021185 BC033852 AK128220 BC060889 BC094785 AL133023	214	+	AK301771 NM_002812	38887	+	TSC_hg19_v1_chr19_+_38865427 AK304486 BC001164 BC065006 D38047 AB464081 CU674590 BT019688 AK308809	39237	+	AK022344|KCNK6|9424|potassium channel, subfamily K, member 6##BC004367|KCNK6|9424|potassium channel, subfamily K, member 6##DQ893422|KCNK6|9424|potassium channel, subfamily K, member 6##DQ896740|KCNK6|9424|potassium channel, subfamily K, member 6##EU978937|KCNK6|9424|potassium channel, subfamily K, member 6##NM_021185|CATSPERG|57828|cation channel, sperm-associated, gamma##BC033852|CATSPERG|57828|cation channel, sperm-associated, gamma##AK128220|CATSPERG|57828|cation channel, sperm-associated, gamma##BC060889|CATSPERG|57828|cation channel, sperm-associated, gamma##BC094785|CATSPERG|57828|cation channel, sperm-associated, gamma##AL133023|CATSPERG|57828|cation channel, sperm-associated, gamma##AK301771|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##NM_002812|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##AK304486|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##BC001164|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##BC065006|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##D38047|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##BT019688|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##AK308809|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	0.588803	CTCF.p2:1:0.589
chr10	48427008	48427127	reg1000099.p1	20.686	+	EU446620 EU446952 BC074921 BC069643 TSC_hg19_v1_chr10_-_48416877 AF188285 NM_016204 AK314956	-10281	-	J03912 CU691778 BC039844 AB593121 M22453 NM_002900 DQ426897	-36132	-	TSC_hg19_v1_chr10_+_48355056 AK056666 BC051323 NM_153034 BC026895	-72016	+	D49492 AK315322 AK310360 BC028237 NM_004962 TSC_hg19_v1_chr10_-_48439183	12012	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	379856	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	400542	-	EU446620|GDF2|2658|growth differentiation factor 2##EU446952|GDF2|2658|growth differentiation factor 2##BC074921|GDF2|2658|growth differentiation factor 2##BC069643|GDF2|2658|growth differentiation factor 2##AF188285|GDF2|2658|growth differentiation factor 2##NM_016204|GDF2|2658|growth differentiation factor 2##AK314956|GDF2|2658|growth differentiation factor 2##J03912|RBP3|5949|retinol binding protein 3, interstitial##BC039844|RBP3|5949|retinol binding protein 3, interstitial##AB593121|RBP3|5949|retinol binding protein 3, interstitial##M22453|RBP3|5949|retinol binding protein 3, interstitial##NM_002900|RBP3|5949|retinol binding protein 3, interstitial##AK056666|ZNF488|118738|zinc finger protein 488##BC051323|ZNF488|118738|zinc finger protein 488##NM_153034|ZNF488|118738|zinc finger protein 488##BC026895|ZNF488|118738|zinc finger protein 488##D49492|GDF10|2662|growth differentiation factor 10##AK315322|GDF10|2662|growth differentiation factor 10##AK310360|GDF10|2662|growth differentiation factor 10##BC028237|GDF10|2662|growth differentiation factor 10##NM_004962|GDF10|2662|growth differentiation factor 10##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	0.500109	CTCF.p2:-17:0.500
chr2	238421532	238421657	reg1000062.p2	20.664	+	TSC_hg19_v1_chr2_+_238395893 NM_001042467 NM_024101 AK296745 AK022207 AK292929 AK310821 AK225381 BC001653 BC051269	-25698	+	TSC_hg19_v1_chr2_-_238322840 NM_004369 NM_057164 NM_057165 NM_057166 NM_057167	-98750	-	TSC_hg19_v1_chr2_-_238322815 X52022	-98773	-	AB015419 BC069081 BC069284 NM_015893	53622	+	TSC_hg19_v1_chr2_-_238499327 BC009827 BC050426 AL136645	77752	-	BC023661 AK225423 AK022600 NM_022449	78146	-	NM_001042467|MLPH|79083|melanophilin##NM_024101|MLPH|79083|melanophilin##AK296745|MLPH|79083|melanophilin##AK022207|MLPH|79083|melanophilin##AK292929|MLPH|79083|melanophilin##AK310821|MLPH|79083|melanophilin##AK225381|MLPH|79083|melanophilin##BC001653|MLPH|79083|melanophilin##BC051269|MLPH|79083|melanophilin##NM_004369|COL6A3|1293|collagen, type VI, alpha 3##NM_057164|COL6A3|1293|collagen, type VI, alpha 3##NM_057165|COL6A3|1293|collagen, type VI, alpha 3##NM_057166|COL6A3|1293|collagen, type VI, alpha 3##NM_057167|COL6A3|1293|collagen, type VI, alpha 3##X52022|COL6A3|1293|collagen, type VI, alpha 3##AB015419|PRLH|51052|prolactin releasing hormone##BC069081|PRLH|51052|prolactin releasing hormone##BC069284|PRLH|51052|prolactin releasing hormone##NM_015893|PRLH|51052|prolactin releasing hormone##BC009827|RAB17|64284|RAB17, member RAS oncogene family##BC050426|RAB17|64284|RAB17, member RAS oncogene family##AL136645|RAB17|64284|RAB17, member RAS oncogene family##BC023661|RAB17|64284|RAB17, member RAS oncogene family##AK225423|RAB17|64284|RAB17, member RAS oncogene family##AK022600|RAB17|64284|RAB17, member RAS oncogene family##NM_022449|RAB17|64284|RAB17, member RAS oncogene family	0.984725	CTCF.p2:-21:0.985
chr15	75063531	75063648	reg1000121.p1	20.635	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-22397	+	AK310810 AM233517 AM233518 AM233519 AM233520 AM236046 AM236047 BC023019 AY871801 K03191 AK223108 AK223113 AK313880 NM_000499	-45796	-	TSC_hg19_v1_chr15_-_74988360 BC011534 BC021271 AK056339 NM_001142443 NM_001142444 NM_025083	-75226	-	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	10836	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	11267	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	41583	+	NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK310810|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233517|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233518|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233519|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233520|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236046|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236047|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC023019|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AY871801|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##K03191|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223108|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223113|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK313880|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##NM_000499|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC011534|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC021271|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK056339|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142443|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142444|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_025083|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like	0.994984	CTCF.p2:-4:0.995
chr19	43951307	43951425	reg1000097.p1	20.617	+	NM_001130011 AY014285 AY359077	-32316	+	AF241268 NM_031451	-58604	+	NM_020406 AF146747 AK290965 TSC_hg19_v1_chr19_+_43857837 AJ290452 AJ310433 AK225226 AM884905 BC029167 AY358932 AB237911 AB527936 CU688610 DQ892045 DQ895239 AJ305326 BT020111	-93521	+	CU691666 AY359006 BC041061 BC039167 AJ223603 AK075464 AK290905 AK314773 AF082889 NM_014400	18410	-	BC029299 NM_198850 BC070094	57669	-	TSC_hg19_v1_chr19_-_44031351 AM392804 AB463613 AK309880 BC008250 AK315346 D83198 NM_014297	79995	-	NM_001130011|TEX101|83639|testis expressed 101##AY014285|TEX101|83639|testis expressed 101##AY359077|TEX101|83639|testis expressed 101##AF241268|TEX101|83639|testis expressed 101##NM_031451|TEX101|83639|testis expressed 101##NM_020406|CD177|57126|CD177 molecule##AF146747|CD177|57126|CD177 molecule##AK290965|CD177|57126|CD177 molecule##AJ290452|CD177|57126|CD177 molecule##AJ310433|CD177|57126|CD177 molecule##AK225226|CD177|57126|CD177 molecule##AM884905|CD177|57126|CD177 molecule##BC029167|CD177|57126|CD177 molecule##AY358932|CD177|57126|CD177 molecule##AB237911|CD177|57126|CD177 molecule##DQ892045|CD177|57126|CD177 molecule##DQ895239|CD177|57126|CD177 molecule##AJ305326|CD177|57126|CD177 molecule##BT020111|CD177|57126|CD177 molecule##AY359006|LYPD3|27076|LY6/PLAUR domain containing 3##BC041061|LYPD3|27076|LY6/PLAUR domain containing 3##BC039167|LYPD3|27076|LY6/PLAUR domain containing 3##AJ223603|LYPD3|27076|LY6/PLAUR domain containing 3##AK075464|LYPD3|27076|LY6/PLAUR domain containing 3##AK290905|LYPD3|27076|LY6/PLAUR domain containing 3##AK314773|LYPD3|27076|LY6/PLAUR domain containing 3##AF082889|LYPD3|27076|LY6/PLAUR domain containing 3##NM_014400|LYPD3|27076|LY6/PLAUR domain containing 3##BC029299|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##NM_198850|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##BC070094|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##AM392804|ETHE1|23474|ethylmalonic encephalopathy 1##AK309880|ETHE1|23474|ethylmalonic encephalopathy 1##BC008250|ETHE1|23474|ethylmalonic encephalopathy 1##AK315346|ETHE1|23474|ethylmalonic encephalopathy 1##D83198|ETHE1|23474|ethylmalonic encephalopathy 1##NM_014297|ETHE1|23474|ethylmalonic encephalopathy 1	0.522926	CTCF.p2:-7:0.523
chr19	10691783	10691902	reg1000054.p1	20.614	+	TSC_hg19_v1_chr19_-_10679653 NM_001800 BC001822 NM_079421	-12204	-	CR542158 CU674892 U20498 DQ892872 DQ892951 DQ896120 AB464505 U49399 U40343 TSC_hg19_v1_chr19_-_10679530	-12413	-	TSC_hg19_v1_chr19_-_10676697 AK093879 AX748348 NM_023008 AK300850	-15145	-	CU678450 CU678534 CU678860 BC003612 BC003387 AF020797 AK222946 AK315689 AK023863 BC005021 NM_005498	6106	-	TSC_hg19_v1_chr19_+_10713140 NM_001145056 AK309801 AK027519	21291	+	TSC_hg19_v1_chr19_+_10736228 FN668568 NM_020428 AK314582 BC040556 BC042692	44377	+	NM_001800|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##BC001822|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##NM_079421|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##CR542158|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U20498|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892872|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892951|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ896120|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U49399|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U40343|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##AK093879|KRI1|65095|KRI1 homolog (S. cerevisiae)##NM_023008|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK300850|KRI1|65095|KRI1 homolog (S. cerevisiae)##BC003612|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##BC003387|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AF020797|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK222946|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK315689|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK023863|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##BC005021|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##NM_005498|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##NM_001145056|SLC44A2|57153|solute carrier family 44, member 2##AK309801|SLC44A2|57153|solute carrier family 44, member 2##AK027519|SLC44A2|57153|solute carrier family 44, member 2##FN668568|SLC44A2|57153|solute carrier family 44, member 2##NM_020428|SLC44A2|57153|solute carrier family 44, member 2##AK314582|SLC44A2|57153|solute carrier family 44, member 2##BC040556|SLC44A2|57153|solute carrier family 44, member 2##BC042692|SLC44A2|57153|solute carrier family 44, member 2	0.159428	
chr16	30996380	30996503	reg1000117.p1	20.596	+	TSC_hg19_v1_chr16_+_30969464 BC108673	-26904	+	AB002337 NM_014712	-27827	+	TSC_hg19_v1_chr16_+_30960437 AK298276 BC006126 BC016150 BC022786	-35994	+	TSC_hg19_v1_chr16_+_30996538 NM_001142777 NM_001142778 NM_025193 AK057436 BC004929 AK290950 AK292068	88	+	AB527655 AY995211 BC062298 AY028792 NM_052874 TSC_hg19_v1_chr16_-_31021950	25408	-	TSC_hg19_v1_chr16_+_31044415 AK091833 AX747209	47975	+	AB002337|SETD1A|9739|SET domain containing 1A##NM_014712|SETD1A|9739|SET domain containing 1A##AK298276|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC006126|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC016150|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC022786|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##NM_001142777|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##NM_001142778|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##NM_025193|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##AK057436|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##BC004929|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##AK290950|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##AK292068|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##AY995211|STX1B|112755|syntaxin 1B##BC062298|STX1B|112755|syntaxin 1B##AY028792|STX1B|112755|syntaxin 1B##NM_052874|STX1B|112755|syntaxin 1B##AK091833|STX4|6810|syntaxin 4	0.982111	CTCF.p2:0:0.982
chr2	10575179	10575293	reg1000102.p1	20.579	+	AK000596 NM_134421	-131411	+	TSC_hg19_v1_chr2_+_10443043 BC017482 NM_002149 BC009846 BC017028	-132187	+	BC093999 BC094001 NM_182626	-293257	+	D28365 BC014562 BC025296 X55362 TSC_hg19_v1_chr2_-_10588440	13124	-	TSC_hg19_v1_chr2_-_10588453 AK301956 NM_002539	13216	-	CU675005 TSC_hg19_v1_chr2_-_10830078 AK290680 AK024000 BC005125 AK024137 AK297169 AK299617	254808	-	AK000596|HPCAL1|3241|hippocalcin-like 1##NM_134421|HPCAL1|3241|hippocalcin-like 1##BC017482|HPCAL1|3241|hippocalcin-like 1##NM_002149|HPCAL1|3241|hippocalcin-like 1##BC009846|HPCAL1|3241|hippocalcin-like 1##BC017028|HPCAL1|3241|hippocalcin-like 1##BC093999|C2orf48|348738|chromosome 2 open reading frame 48##BC094001|C2orf48|348738|chromosome 2 open reading frame 48##NM_182626|C2orf48|348738|chromosome 2 open reading frame 48##D28365|ODC1|4953|ornithine decarboxylase 1##BC014562|ODC1|4953|ornithine decarboxylase 1##BC025296|ODC1|4953|ornithine decarboxylase 1##X55362|ODC1|4953|ornithine decarboxylase 1##AK301956|ODC1|4953|ornithine decarboxylase 1##NM_002539|ODC1|4953|ornithine decarboxylase 1##AK290680|NOL10|79954|nucleolar protein 10##AK024000|NOL10|79954|nucleolar protein 10##BC005125|NOL10|79954|nucleolar protein 10##AK024137|NOL10|79954|nucleolar protein 10##AK297169|NOL10|79954|nucleolar protein 10##AK299617|NOL10|79954|nucleolar protein 10	0.999447	CTCF.p2:11:0.999
chr15	94867564	94867690	reg1000108.p1	20.563	+	NM_001159643 NM_018349 AY656717 BC131527	-26166	+	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	-92769	+	AB463222 AM392685 BC146682 AK074980 BC140838 BC151132 AL136826 TSC_hg19_v1_chr15_-_93632430 AK074910 AK291365 NM_020211	-1235274	-	NM_001159644 BC025708 BC111024 AK002037	31682	+	TSC_hg19_v1_chr15_-_95870310 BC040875	1002692	-	BC106083 NM_001145155 FM208183	2001534	+	NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##AM392685|RGMA|56963|RGM domain family, member A##BC146682|RGMA|56963|RGM domain family, member A##AK074980|RGMA|56963|RGM domain family, member A##BC140838|RGMA|56963|RGM domain family, member A##BC151132|RGMA|56963|RGM domain family, member A##AL136826|RGMA|56963|RGM domain family, member A##AK074910|RGMA|56963|RGM domain family, member A##NM_020211|RGMA|56963|RGM domain family, member A##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##BC040875|LOC400456|400456|uncharacterized LOC400456##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.999866	CTCF.p2:11:1.000
chr20	61640521	61640657	reg1000073.p1	20.559	+	BC137288 BC137308 NM_080606	-2203	-	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-56464	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-56559	+	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	206934	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	226752	+	TSC_hg19_v1_chr20_-_61884664 AK308958	244144	-	BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7##AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4	0.999468	CTCF.p2:9:0.999
chr11	2449571	2449690	reg1000074.p1	20.502	+	AJ270996 BC093787 BC093789 BC143351 BC143353 AF177473 NM_014555	-5373	-	AF125568 NM_005706	-26108	+	TSC_hg19_v1_chr11_+_2421990 BC006091	-27634	+	TSC_hg19_v1_chr11_+_2466237 AF000571 NM_000218 EF010934 AB464057 AY114213 U86146	16619	+	BC007733 TSC_hg19_v1_chr11_-_2560881	111217	-	AK123073 TSC_hg19_v1_chr11_-_2721223	271595	-	AJ270996|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093787|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093789|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143351|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143353|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF177473|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##NM_014555|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF125568|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_005706|TSSC4|10078|tumor suppressing subtransferable candidate 4##BC006091|TSSC4|10078|tumor suppressing subtransferable candidate 4##AF000571|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##NM_000218|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##EF010934|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AY114213|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##U86146|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AK123073|KCNQ1OT1|10984|KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)	0.999848	CTCF.p2:-15:1.000
chr1	205628178	205628299	reg1000130.p1	20.480	+	NM_001973 NM_021795	-26239	-	BC063676 M85164 M85165 TSC_hg19_v1_chr1_-_205601025 BC040145	-27332	-	BC036549 AK091896 AX747240 TSC_hg19_v1_chr1_+_205538184 AK304120 AK090831 AX746641 AK295148	-90025	+	BC050416 AY033593 TSC_hg19_v1_chr1_-_205649588	21330	-	AK313479 TSC_hg19_v1_chr1_-_205649636 AK290364 FJ805258 FJ805259 FJ805260 FJ805261 NM_033102 EF632109	21443	-	TSC_hg19_v1_chr1_-_205719084 CR457339 AB528490 DQ891218 DQ894401	90851	-	NM_001973|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##NM_021795|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC063676|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85164|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85165|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC040145|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC036549|MFSD4|148808|major facilitator superfamily domain containing 4##AK091896|MFSD4|148808|major facilitator superfamily domain containing 4##AK304120|MFSD4|148808|major facilitator superfamily domain containing 4##AK090831|MFSD4|148808|major facilitator superfamily domain containing 4##AK295148|MFSD4|148808|major facilitator superfamily domain containing 4##BC050416|SLC45A3|85414|solute carrier family 45, member 3##AY033593|SLC45A3|85414|solute carrier family 45, member 3##AK313479|SLC45A3|85414|solute carrier family 45, member 3##AK290364|SLC45A3|85414|solute carrier family 45, member 3##NM_033102|SLC45A3|85414|solute carrier family 45, member 3##CR457339|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1##DQ891218|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1##DQ894401|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	0.018957	
chr16	67850550	67850682	reg1000088.p2	20.468	+	AF132730 AK303841 BC050693 AK302300 AK301920 NM_018430 BC111018 BC035320 AK027245	-9597	+	TSC_hg19_v1_chr16_-_67840464 BC121176 BC121177 AY337313 NM_020850	-10107	-	TSC_hg19_v1_chr16_-_67840456 AB384605 AB040897 AK055727 AK298806 AK304030 BC099917 AK295171 AK295530	-10212	-	TSC_hg19_v1_chr16_-_67867789 BC007642 BC015202 AK301621 AK125366 AK297570	17149	-	AK225399 TSC_hg19_v1_chr16_-_67867798	17182	-	AK023173 AK300887 TSC_hg19_v1_chr16_-_67867801	17187	-	AF132730|TSNAXIP1|55815|translin-associated factor X interacting protein 1##AK303841|TSNAXIP1|55815|translin-associated factor X interacting protein 1##BC050693|TSNAXIP1|55815|translin-associated factor X interacting protein 1##AK302300|TSNAXIP1|55815|translin-associated factor X interacting protein 1##AK301920|TSNAXIP1|55815|translin-associated factor X interacting protein 1##NM_018430|TSNAXIP1|55815|translin-associated factor X interacting protein 1##BC111018|TSNAXIP1|55815|translin-associated factor X interacting protein 1##BC035320|TSNAXIP1|55815|translin-associated factor X interacting protein 1##AK027245|TSNAXIP1|55815|translin-associated factor X interacting protein 1##BC121176|RANBP10|57610|RAN binding protein 10##BC121177|RANBP10|57610|RAN binding protein 10##AY337313|RANBP10|57610|RAN binding protein 10##NM_020850|RANBP10|57610|RAN binding protein 10##AB040897|RANBP10|57610|RAN binding protein 10##AK055727|RANBP10|57610|RAN binding protein 10##AK298806|RANBP10|57610|RAN binding protein 10##AK304030|RANBP10|57610|RAN binding protein 10##BC099917|RANBP10|57610|RAN binding protein 10##AK295171|RANBP10|57610|RAN binding protein 10##AK295530|RANBP10|57610|RAN binding protein 10##BC007642|CENPT|80152|centromere protein T##BC015202|CENPT|80152|centromere protein T##AK301621|CENPT|80152|centromere protein T##AK125366|CENPT|80152|centromere protein T##AK297570|CENPT|80152|centromere protein T##AK225399|CENPT|80152|centromere protein T##AK023173|CENPT|80152|centromere protein T##AK300887|CENPT|80152|centromere protein T	1.688101	CTCF.p2:-18:1.000	CTCF.p2:38:0.475	CTCF.p2:-69:0.213
chr3	42141381	42141508	reg1000086.p1	20.467	+	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	-8611	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	-137885	-	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	-900420	+	TSC_hg19_v1_chr3_+_42190749 AK294221	49304	+	AL713787 TSC_hg19_v1_chr3_+_42190865	49403	+	TSC_hg19_v1_chr3_+_42201684 BX647199 NM_014965 BC015922 AK000754 AM392573 AM393596 CU677507 EU446989	60311	+	AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1##BX647199|TRAK1|22906|trafficking protein, kinesin binding 1##NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1##BC015922|TRAK1|22906|trafficking protein, kinesin binding 1##AK000754|TRAK1|22906|trafficking protein, kinesin binding 1##AM392573|TRAK1|22906|trafficking protein, kinesin binding 1##AM393596|TRAK1|22906|trafficking protein, kinesin binding 1##EU446989|TRAK1|22906|trafficking protein, kinesin binding 1	0.932072	CTCF.p2:27:0.932
chr1	155908078	155908205	reg1000112.p1	20.461	+	TSC_hg19_v1_chr1_-_155904201 AK225714	-3939	-	BC027182 TSC_hg19_v1_chr1_-_155904193 AB020714	-3951	-	TSC_hg19_v1_chr1_-_155904186 BC062637 NM_014949	-3955	-	NM_181885 BC101507 BC101509 AY170824 AY288415 AY394502 EU432129	3348	+	TSC_hg19_v1_chr1_-_155939059 AM393305 BT007407 CU676564 DQ891489 DQ894678	30920	-	TSC_hg19_v1_chr1_-_155947967 AL512715 NM_004723	39804	-	AK225714|KIAA0907|22889|KIAA0907##BC027182|KIAA0907|22889|KIAA0907##AB020714|KIAA0907|22889|KIAA0907##BC062637|KIAA0907|22889|KIAA0907##NM_014949|KIAA0907|22889|KIAA0907##NM_181885|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##BC101507|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##BC101509|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY170824|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY288415|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY394502|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##EU432129|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AM393305|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##BT007407|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##DQ891489|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##DQ894678|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AL512715|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##NM_004723|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2	0.485676	CTCF.p2:-19:0.300
chr2	37641696	37641830	reg1000118.p1	20.438	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-69950	+	BC030706 BC012820 AB015982 NM_005813	-97570	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-182917	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	257016	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	257626	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	510669	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.0	
chr14	23590118	23590258	reg1000105.p1	20.431	+	NM_001805	-1369	-	AF124726 NM_001164814 NM_001164815 NM_014977	-25366	-	TSC_hg19_v1_chr14_+_23564792 BC009645	-25401	+	TSC_hg19_v1_chr14_-_23623523 AK307609 AK300384 BX248288 NM_182728	33373	-	TSC_hg19_v1_chr14_-_23652818 AB037669	62634	-	TSC_hg19_v1_chr14_-_23652870 AL365342 NM_012244 Y18483 AL365346 AK223610	62684	-	NM_001805|CEBPE|1053|CCAAT/enhancer binding protein (C/EBP), epsilon##AF124726|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164814|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164815|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_014977|ACIN1|22985|apoptotic chromatin condensation inducer 1##BC009645|C14orf119|55017|chromosome 14 open reading frame 119##AK307609|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AK300384|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##BX248288|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##NM_182728|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AB037669|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AL365342|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##NM_012244|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##Y18483|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AL365346|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AK223610|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	1.997426	CTCF.p2:32:0.998	CTCF.p2:-35:1.000
chr1	26471717	26471849	reg1000154.p1	20.401	+	AK312872 NM_001243533 NM_152835 TSC_hg19_v1_chr1_+_26438314 AF411102 BC028713 AK129596	-33444	+	NM_001243532	-34128	+	BT007373 BC080529 AF353673 BC015717 AJ276484 AK056942 AK297820 NM_032588 TSC_hg19_v1_chr1_-_26394122	-77730	-	AK024112 NM_024869 BC025658 AK290715	13757	+	TSC_hg19_v1_chr1_+_26496395 AK311926 NM_015871 BC002580 BC019267 AB527484 D45213 EU446798	24672	+	TSC_hg19_v1_chr1_+_26503979 AK296814 NM_006314 AB209335 AK222904 BC011604 BC012797 AF100153 AK001900 AK222817 AK292646 AK302056	32213	+	AK312872|PDIK1L|149420|PDLIM1 interacting kinase 1 like##NM_001243533|PDIK1L|149420|PDLIM1 interacting kinase 1 like##NM_152835|PDIK1L|149420|PDLIM1 interacting kinase 1 like##AF411102|PDIK1L|149420|PDLIM1 interacting kinase 1 like##BC028713|PDIK1L|149420|PDLIM1 interacting kinase 1 like##NM_001243532|PDIK1L|149420|PDLIM1 interacting kinase 1 like##BT007373|TRIM63|84676|tripartite motif containing 63##BC080529|TRIM63|84676|tripartite motif containing 63##AF353673|TRIM63|84676|tripartite motif containing 63##AJ276484|TRIM63|84676|tripartite motif containing 63##AK056942|TRIM63|84676|tripartite motif containing 63##AK297820|TRIM63|84676|tripartite motif containing 63##NM_032588|TRIM63|84676|tripartite motif containing 63##AK024112|FAM110D|79927|family with sequence similarity 110, member D##NM_024869|FAM110D|79927|family with sequence similarity 110, member D##BC025658|FAM110D|79927|family with sequence similarity 110, member D##AK290715|FAM110D|79927|family with sequence similarity 110, member D##AK311926|ZNF593|51042|zinc finger protein 593##NM_015871|ZNF593|51042|zinc finger protein 593##BC002580|ZNF593|51042|zinc finger protein 593##BC019267|ZNF593|51042|zinc finger protein 593##D45213|ZNF593|51042|zinc finger protein 593##EU446798|ZNF593|51042|zinc finger protein 593##AK296814|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##NM_006314|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AB209335|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK222904|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##BC011604|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##BC012797|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AF100153|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK001900|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK222817|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK292646|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK302056|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1	0.995387	CTCF.p2:4:0.995
chr17	41771886	41772005	reg1000125.p1	20.400	+	NM_001040002 AK291139	-32670	-	AB527749 CU686836 EU446636 BC069474 BC069506 NM_004527 NM_013999 U10492 U10493	-33030	-	TSC_hg19_v1_chr17_-_41623674 AK315961 U18018 NM_001079675	-148219	-	BC101086 BC101087 BC101088 BC101089 AF331844 AF326739 NM_025237	64198	-	AK226170 TSC_hg19_v1_chr17_-_41856314 AB451424 BT019522 CU678116 DQ893122 DQ896399 BC035701 AK129822 L05147 BC002682 NM_004090	84339	-	BC054872 BC070324 NM_001136483 BC146971 AK125817	85869	+	NM_001040002|MEOX1|4222|mesenchyme homeobox 1##AK291139|MEOX1|4222|mesenchyme homeobox 1##EU446636|MEOX1|4222|mesenchyme homeobox 1##BC069474|MEOX1|4222|mesenchyme homeobox 1##BC069506|MEOX1|4222|mesenchyme homeobox 1##NM_004527|MEOX1|4222|mesenchyme homeobox 1##NM_013999|MEOX1|4222|mesenchyme homeobox 1##U10492|MEOX1|4222|mesenchyme homeobox 1##U10493|MEOX1|4222|mesenchyme homeobox 1##AK315961|ETV4|2118|ets variant 4##U18018|ETV4|2118|ets variant 4##NM_001079675|ETV4|2118|ets variant 4##BC101086|SOST|50964|sclerostin##BC101087|SOST|50964|sclerostin##BC101088|SOST|50964|sclerostin##BC101089|SOST|50964|sclerostin##AF331844|SOST|50964|sclerostin##AF326739|SOST|50964|sclerostin##NM_025237|SOST|50964|sclerostin##AK226170|DUSP3|1845|dual specificity phosphatase 3##AB451424|DUSP3|1845|dual specificity phosphatase 3##BT019522|DUSP3|1845|dual specificity phosphatase 3##DQ893122|DUSP3|1845|dual specificity phosphatase 3##DQ896399|DUSP3|1845|dual specificity phosphatase 3##BC035701|DUSP3|1845|dual specificity phosphatase 3##AK129822|DUSP3|1845|dual specificity phosphatase 3##L05147|DUSP3|1845|dual specificity phosphatase 3##BC002682|DUSP3|1845|dual specificity phosphatase 3##NM_004090|DUSP3|1845|dual specificity phosphatase 3##BC054872|C17orf105|284067|chromosome 17 open reading frame 105##BC070324|C17orf105|284067|chromosome 17 open reading frame 105##NM_001136483|C17orf105|284067|chromosome 17 open reading frame 105##BC146971|C17orf105|284067|chromosome 17 open reading frame 105##AK125817|C17orf105|284067|chromosome 17 open reading frame 105	0.0	
chr1	46502847	46502967	reg1000098.p1	20.367	+	TSC_hg19_v1_chr1_+_46379267 AK027123 AK309510	-123645	+	TSC_hg19_v1_chr1_+_46269283 AB047005 NM_015112 BC065499	-233609	+	BC032544 TSC_hg19_v1_chr1_-_46216325 AK023880 NM_001145349 NM_005897	-286508	-	TSC_hg19_v1_chr1_-_46598298 CR749649 BC021622 NM_003629 EU832448 EU832531 BX537388 BC094768 AK313726 NM_001114172	95571	-	NM_005727 AK313774	137846	+	TSC_hg19_v1_chr1_+_46646203 BC007290 BC000695 BC013404 AF065388 AF133425	143303	+	AK027123|MAST2|23139|microtubule associated serine/threonine kinase 2##AK309510|MAST2|23139|microtubule associated serine/threonine kinase 2##AB047005|MAST2|23139|microtubule associated serine/threonine kinase 2##NM_015112|MAST2|23139|microtubule associated serine/threonine kinase 2##BC065499|MAST2|23139|microtubule associated serine/threonine kinase 2##BC032544|IPP|3652|intracisternal A particle-promoted polypeptide##AK023880|IPP|3652|intracisternal A particle-promoted polypeptide##NM_001145349|IPP|3652|intracisternal A particle-promoted polypeptide##NM_005897|IPP|3652|intracisternal A particle-promoted polypeptide##CR749649|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BC021622|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_003629|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##EU832448|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##EU832531|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BX537388|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BC094768|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##AK313726|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_001114172|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_005727|TSPAN1|10103|tetraspanin 1##AK313774|TSPAN1|10103|tetraspanin 1##BC007290|TSPAN1|10103|tetraspanin 1##BC000695|TSPAN1|10103|tetraspanin 1##BC013404|TSPAN1|10103|tetraspanin 1##AF065388|TSPAN1|10103|tetraspanin 1##AF133425|TSPAN1|10103|tetraspanin 1	0.999676	CTCF.p2:-4:1.000
chr17	47472509	47472614	reg1000069.p2	20.357	+	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	-32981	-	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	-164418	-	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-184484	+	BC095460 TSC_hg19_v1_chr17_-_47492215	19654	-	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	19687	-	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	100127	+	CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##BC095460|PHB|5245|prohibitin##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor	0.999703	CTCF.p2:4:1.000
chr8	71446790	71446930	reg1000114.p1	20.354	+	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	-130834	-	BC092442 TSC_hg19_v1_chr8_-_71315599	-131313	-	TSC_hg19_v1_chr8_-_70983549 AF319458 AK022595 NM_024504	-463305	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	73662	-	TSC_hg19_v1_chr8_-_71520654 AK303411 NM_014294	73796	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	134524	-	NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##BC092442|NCOA2|10499|nuclear receptor coactivator 2##AF319458|PRDM14|63978|PR domain containing 14##AK022595|PRDM14|63978|PR domain containing 14##NM_024504|PRDM14|63978|PR domain containing 14##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1##AK303411|TRAM1|23471|translocation associated membrane protein 1##NM_014294|TRAM1|23471|translocation associated membrane protein 1##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2	0.10865	
chr22	20144654	20144767	reg1000103.p1	20.349	+	NM_001243537	-7280	-	TSC_hg19_v1_chr22_+_20119357 AY894890 BC053544 NM_001185024 NM_013373 AK131238	-25277	+	TSC_hg19_v1_chr22_+_20105145 AB587487 CU013156 CU013444	-39553	+	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	111057	-	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	162859	-	NM_001242313	232958	+	NM_001243537|LOC388849|388849|uncharacterized LOC388849##AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8##BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8##AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8##CU013156|RANBP1|5902|RAN binding protein 1##CU013444|RANBP1|5902|RAN binding protein 1##AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_001242313|TMEM191B|728229|transmembrane protein 191B	0.999778	CTCF.p2:-11:1.000
chr2	238480737	238480864	reg1000116.p1	20.341	+	AB015419 BC069081 BC069284 NM_015893	-5584	+	TSC_hg19_v1_chr2_+_238395893 NM_001042467 NM_024101 AK296745 AK022207 AK292929 AK310821 AK225381 BC001653 BC051269	-84904	+	TSC_hg19_v1_chr2_-_238322840 NM_004369 NM_057164 NM_057165 NM_057166 NM_057167	-157956	-	TSC_hg19_v1_chr2_-_238499327 BC009827 BC050426 AL136645	18546	-	BC023661 AK225423 AK022600 NM_022449	18940	-	TSC_hg19_v1_chr2_+_238536229 NM_001137550 AF115510	55559	+	AB015419|PRLH|51052|prolactin releasing hormone##BC069081|PRLH|51052|prolactin releasing hormone##BC069284|PRLH|51052|prolactin releasing hormone##NM_015893|PRLH|51052|prolactin releasing hormone##NM_001042467|MLPH|79083|melanophilin##NM_024101|MLPH|79083|melanophilin##AK296745|MLPH|79083|melanophilin##AK022207|MLPH|79083|melanophilin##AK292929|MLPH|79083|melanophilin##AK310821|MLPH|79083|melanophilin##AK225381|MLPH|79083|melanophilin##BC001653|MLPH|79083|melanophilin##BC051269|MLPH|79083|melanophilin##NM_004369|COL6A3|1293|collagen, type VI, alpha 3##NM_057164|COL6A3|1293|collagen, type VI, alpha 3##NM_057165|COL6A3|1293|collagen, type VI, alpha 3##NM_057166|COL6A3|1293|collagen, type VI, alpha 3##NM_057167|COL6A3|1293|collagen, type VI, alpha 3##BC009827|RAB17|64284|RAB17, member RAS oncogene family##BC050426|RAB17|64284|RAB17, member RAS oncogene family##AL136645|RAB17|64284|RAB17, member RAS oncogene family##BC023661|RAB17|64284|RAB17, member RAS oncogene family##AK225423|RAB17|64284|RAB17, member RAS oncogene family##AK022600|RAB17|64284|RAB17, member RAS oncogene family##NM_022449|RAB17|64284|RAB17, member RAS oncogene family##NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	0.999897	CTCF.p2:15:1.000
chr8	143528965	143529089	reg1000161.p1	20.325	+	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	-44490	-	BC144560 AK125848 AK131461 NM_207414	-1011710	-	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	-1096966	+	AB005297 NM_001702	16349	+	AF193421 D87468 BC075802 BC012321 NM_015193 TSC_hg19_v1_chr8_-_143695839	166799	-	TSC_hg19_v1_chr8_-_143751386 BC071862	222327	-	BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1##AF193421|ARC|23237|activity-regulated cytoskeleton-associated protein##D87468|ARC|23237|activity-regulated cytoskeleton-associated protein##BC075802|ARC|23237|activity-regulated cytoskeleton-associated protein##BC012321|ARC|23237|activity-regulated cytoskeleton-associated protein##NM_015193|ARC|23237|activity-regulated cytoskeleton-associated protein##BC071862|JRK|8629|jerky homolog (mouse)	1.063796	CTCF.p2:3:0.999
chr7	48149870	48149999	reg1000132.p1	20.323	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-20979	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	-21134	+	TSC_hg19_v1_chr7_+_48128282 BC007348 NM_181597	-21645	+	AK126220 AY204751 BX647273 NM_152701	61121	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	1663336	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	1982890	-	BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##BC007348|UPP1|7378|uridine phosphorylase 1##NM_181597|UPP1|7378|uridine phosphorylase 1##AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein	1.035603	CTCF.p2:8:1.000
chr1	9515939	9516083	reg1000162.p1	20.321	+	TSC_hg19_v1_chr1_+_9415945 CU677397	-100065	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	-163042	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	-163074	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	83521	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	83625	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	132945	+	AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201	0.766746	CTCF.p2:11:0.767
chr1	29208690	29208822	reg1000144.p1	20.302	+	NM_000911 U07882	-70103	+	TSC_hg19_v1_chr1_+_29063503 AK303833 NM_001172828 AF432214 AF155095 AF192968 DQ892157 DQ895352 CU678040 AB451335 AB451484	-145219	+	NM_001173128 NM_016258 BC002559 AK292581 TSC_hg19_v1_chr1_+_29063435	-145473	+	TSC_hg19_v1_chr1_+_29213611 AB209649 NM_001166005 NM_001166007 NM_004437 NM_203342 NM_203343	4835	+	TSC_hg19_v1_chr1_+_29213624 M14993 M61733 J03796	4901	+	TSC_hg19_v1_chr1_+_29241080 NM_001166006 BC039079 AK310655	32325	+	NM_000911|OPRD1|4985|opioid receptor, delta 1##U07882|OPRD1|4985|opioid receptor, delta 1##AK303833|YTHDF2|51441|YTH domain family, member 2##NM_001172828|YTHDF2|51441|YTH domain family, member 2##AF432214|YTHDF2|51441|YTH domain family, member 2##AF155095|YTHDF2|51441|YTH domain family, member 2##AF192968|YTHDF2|51441|YTH domain family, member 2##DQ892157|YTHDF2|51441|YTH domain family, member 2##DQ895352|YTHDF2|51441|YTH domain family, member 2##AB451335|YTHDF2|51441|YTH domain family, member 2##AB451484|YTHDF2|51441|YTH domain family, member 2##NM_001173128|YTHDF2|51441|YTH domain family, member 2##NM_016258|YTHDF2|51441|YTH domain family, member 2##BC002559|YTHDF2|51441|YTH domain family, member 2##AK292581|YTHDF2|51441|YTH domain family, member 2##AB209649|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166005|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166007|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_004437|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203342|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203343|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M14993|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M61733|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##J03796|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	0.98608	CTCF.p2:-22:0.986
chr20	32045109	32045238	reg1000177.p1	20.294	+	AB590297 DQ893566 DQ896816 AK301800 TSC_hg19_v1_chr20_-_32031570 U40571 BC026215 S81737 AK291994 NM_003098	-13612	-	TSC_hg19_v1_chr20_-_31989330 NM_016082 NM_016408	-55834	-	BC001215 TSC_hg19_v1_chr20_-_31989326 AF152097 BC050706 AK027449 AF161516 AK023992 AK222745 AK292075 AK295342 AK309906 AK314532 AY462283 AY462284	-55859	-	TSC_hg19_v1_chr20_+_32077885 AK294168 AK307887	32663	+	TSC_hg19_v1_chr20_+_32077922 NM_001032999 AF052211	32798	+	BC015066 NM_001039709 NM_005093 AF069747 AF052212	105004	+	DQ893566|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##DQ896816|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##AK301800|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##U40571|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##BC026215|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##S81737|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##AK291994|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##NM_003098|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##NM_016082|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##NM_016408|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##BC001215|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AF152097|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##BC050706|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK027449|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AF161516|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK023992|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK222745|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK292075|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK295342|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK309906|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK314532|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AY462283|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AY462284|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK294168|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AK307887|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##BC015066|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##NM_001039709|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##NM_005093|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AF069747|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AF052212|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2	0.988622	CTCF.p2:-2:0.989
chr16	19897694	19897834	reg1000176.p1	20.237	+	AK295204 AF202640 TSC_hg19_v1_chr16_-_19896168 BC034467 AF181862 NM_016235 AK294680 AK075119 AK315989 AK296754	-1600	-	TSC_hg19_v1_chr16_-_19729532 BC117562 NM_001012991	-168277	-	TSC_hg19_v1_chr16_+_19727698 AF520569 AF520570 AK000122 NM_153208	-170027	+	AB196529 AY635179 BC137237 BC137238 BC144547 NM_001002911 AK291384	187323	-	U36221 AK312277 BX647831 BX648201 BX649067 BX648023 NM_001007240 NM_001007241 NM_001007242 NM_001502 CR749600	441089	-	AK127643 AK055722 AK091961 AK096043 AX747279 M15881 BC035975 AK127648 NM_001008389 NM_003361	466268	-	AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC117562|C16orf88|400506|chromosome 16 open reading frame 88##NM_001012991|C16orf88|400506|chromosome 16 open reading frame 88##AF520569|IQCK|124152|IQ motif containing K##AF520570|IQCK|124152|IQ motif containing K##AK000122|IQCK|124152|IQ motif containing K##NM_153208|IQCK|124152|IQ motif containing K##AB196529|GPR139|124274|G protein-coupled receptor 139##AY635179|GPR139|124274|G protein-coupled receptor 139##BC137237|GPR139|124274|G protein-coupled receptor 139##BC137238|GPR139|124274|G protein-coupled receptor 139##NM_001002911|GPR139|124274|G protein-coupled receptor 139##AK291384|GPR139|124274|G protein-coupled receptor 139##U36221|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK312277|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX647831|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648201|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX649067|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648023|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007240|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007241|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007242|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001502|GP2|2813|glycoprotein 2 (zymogen granule membrane)##CR749600|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK127643|UMOD|7369|uromodulin##AK055722|UMOD|7369|uromodulin##AK091961|UMOD|7369|uromodulin##AK096043|UMOD|7369|uromodulin##M15881|UMOD|7369|uromodulin##BC035975|UMOD|7369|uromodulin##AK127648|UMOD|7369|uromodulin##NM_001008389|UMOD|7369|uromodulin##NM_003361|UMOD|7369|uromodulin	0.920126	CTCF.p2:2:0.900
chr20	34583044	34583167	reg1000156.p1	20.222	+	AK057454 NM_001207076 NM_080834 BC030782 BC057288 BC114634 BC114945	-26569	+	NM_016558	-39825	-	TSC_hg19_v1_chr20_-_34542404 AF204271 BC000785 AF207829 NM_033630	-40639	-	TSC_hg19_v1_chr20_-_34638883 BC011592 AK090641 AX746554 BC031254	55799	-	TSC_hg19_v1_chr20_+_34680631 AK096848 AK299817 AK126875 BC040259	97546	+	CR936825 NM_177996	117197	+	AK057454|C20orf152|140894|chromosome 20 open reading frame 152##NM_001207076|C20orf152|140894|chromosome 20 open reading frame 152##NM_080834|C20orf152|140894|chromosome 20 open reading frame 152##BC030782|C20orf152|140894|chromosome 20 open reading frame 152##BC057288|C20orf152|140894|chromosome 20 open reading frame 152##BC114634|C20orf152|140894|chromosome 20 open reading frame 152##BC114945|C20orf152|140894|chromosome 20 open reading frame 152##NM_016558|SCAND1|51282|SCAN domain containing 1##AF204271|SCAND1|51282|SCAN domain containing 1##BC000785|SCAND1|51282|SCAN domain containing 1##AF207829|SCAND1|51282|SCAN domain containing 1##NM_033630|SCAND1|51282|SCAN domain containing 1##BC011592|LOC647979|647979|uncharacterized LOC647979##AK090641|LOC647979|647979|uncharacterized LOC647979##AK096848|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK299817|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK126875|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##BC040259|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##CR936825|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##NM_177996|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1	0.937738	CTCF.p2:-2:0.938
chr19	16358539	16358665	reg1000089.p2	20.212	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	-49852	+	TSC_hg19_v1_chr19_+_16296220 AK312058 BC000639 AL050157 NM_014077 BC017286 AF151902 AM393549 AM393669	-62370	+	AB050868 BC069320 BC069428 BC069524 NM_054113 HQ258101 BC112200 BC113591	-74292	-	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	77039	+	AF134053 TSC_hg19_v1_chr19_+_16435803	77167	+	BC142662 AB527825 AF110265 BC131590 BC037558 TSC_hg19_v1_chr19_-_16582771 AB015346 NM_021235 BC067114 BC051873 BC142716 AK296473 AK297428 AK024166	224174	-	AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK312058|FAM32A|26017|family with sequence similarity 32, member A##BC000639|FAM32A|26017|family with sequence similarity 32, member A##AL050157|FAM32A|26017|family with sequence similarity 32, member A##NM_014077|FAM32A|26017|family with sequence similarity 32, member A##BC017286|FAM32A|26017|family with sequence similarity 32, member A##AF151902|FAM32A|26017|family with sequence similarity 32, member A##AM393549|FAM32A|26017|family with sequence similarity 32, member A##AM393669|FAM32A|26017|family with sequence similarity 32, member A##AB050868|CIB3|117286|calcium and integrin binding family member 3##BC069320|CIB3|117286|calcium and integrin binding family member 3##BC069428|CIB3|117286|calcium and integrin binding family member 3##BC069524|CIB3|117286|calcium and integrin binding family member 3##NM_054113|CIB3|117286|calcium and integrin binding family member 3##HQ258101|CIB3|117286|calcium and integrin binding family member 3##BC112200|CIB3|117286|calcium and integrin binding family member 3##BC113591|CIB3|117286|calcium and integrin binding family member 3##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)##AF134053|KLF2|10365|Kruppel-like factor 2 (lung)##BC142662|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AF110265|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC131590|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC037558|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB015346|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##NM_021235|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC067114|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC051873|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC142716|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK296473|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK297428|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK024166|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1	0.997927	CTCF.p2:-9:0.998
chr7	36331195	36331319	reg1000137.p1	20.208	+	TSC_hg19_v1_chr7_+_36193025 AB051493	-138202	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	-138374	+	TSC_hg19_v1_chr7_+_36192789 NM_030636	-138452	+	TSC_hg19_v1_chr7_-_36406811 BC056191 AB384038 BC136362 BC144032 AB020702 BC110422 NM_001199707 AK293912 AK294686 AK302559 NM_001199706 NM_015314 NM_001199708	75415	-	TSC_hg19_v1_chr7_+_36429470 BC070066 NM_018685 AK299803 AK291254 AF273437	98183	+	BC028678 NM_001100425	98457	-	AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##NM_030636|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC056191|KIAA0895|23366|KIAA0895##BC136362|KIAA0895|23366|KIAA0895##BC144032|KIAA0895|23366|KIAA0895##AB020702|KIAA0895|23366|KIAA0895##BC110422|KIAA0895|23366|KIAA0895##NM_001199707|KIAA0895|23366|KIAA0895##AK293912|KIAA0895|23366|KIAA0895##AK294686|KIAA0895|23366|KIAA0895##AK302559|KIAA0895|23366|KIAA0895##NM_001199706|KIAA0895|23366|KIAA0895##NM_015314|KIAA0895|23366|KIAA0895##NM_001199708|KIAA0895|23366|KIAA0895##BC070066|ANLN|54443|anillin, actin binding protein##NM_018685|ANLN|54443|anillin, actin binding protein##AK299803|ANLN|54443|anillin, actin binding protein##AK291254|ANLN|54443|anillin, actin binding protein##AF273437|ANLN|54443|anillin, actin binding protein##BC028678|KIAA0895|23366|KIAA0895##NM_001100425|KIAA0895|23366|KIAA0895	0.974971	CTCF.p2:9:0.975
chr9	136859639	136859743	reg1000028.p6	20.170	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	-2245	-	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-254705	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-256213	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	73502	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	73935	-	NM_017588 TSC_hg19_v1_chr9_+_137001212	141519	+	BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3##NM_017588|WDR5|11091|WD repeat domain 5	0.999361	CTCF.p2:4:0.999
chr20	937211	937314	reg1000075.p2	20.158	+	AB527108 AF113708 BC111976 BC111978 AF074332 NM_015985 AK304756	-40346	-	NM_031424 BC022238 AB196290 DQ431181	-111897	+	BC004222 NM_207121	-120552	+	AB528812 AK122609 DQ355152 NM_001029871 NM_001040007 TSC_hg19_v1_chr20_-_983029	45655	-	AK302164 NM_178578 BC126127 BC126462	156698	+	TSC_hg19_v1_chr20_+_1099244 NM_006814 AK098612 AK294134 D88378 AB590890 HQ258165 AK300667	162091	+	AF113708|ANGPT4|51378|angiopoietin 4##BC111976|ANGPT4|51378|angiopoietin 4##BC111978|ANGPT4|51378|angiopoietin 4##AF074332|ANGPT4|51378|angiopoietin 4##NM_015985|ANGPT4|51378|angiopoietin 4##AK304756|ANGPT4|51378|angiopoietin 4##NM_031424|FAM110A|83541|family with sequence similarity 110, member A##BC022238|FAM110A|83541|family with sequence similarity 110, member A##AB196290|FAM110A|83541|family with sequence similarity 110, member A##DQ431181|FAM110A|83541|family with sequence similarity 110, member A##BC004222|FAM110A|83541|family with sequence similarity 110, member A##NM_207121|FAM110A|83541|family with sequence similarity 110, member A##AK122609|RSPO4|343637|R-spondin 4##DQ355152|RSPO4|343637|R-spondin 4##NM_001029871|RSPO4|343637|R-spondin 4##NM_001040007|RSPO4|343637|R-spondin 4##AK302164|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##NM_178578|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##BC126127|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##BC126462|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##NM_006814|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK098612|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK294134|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##D88378|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##HQ258165|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK300667|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	0.202828	CTCF.p2:9:0.203
chr4	183859390	183859519	reg1000134.p1	20.145	+	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	-20820	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	-20924	-	NM_001080477 HE578284 HE578285	-614300	+	TSC_hg19_v1_chr4_+_184020431 NM_024949	161024	+	NM_001111319	382472	-	NM_001185149	384124	-	NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_024949|WWC2|80014|WW and C2 domain containing 2##NM_001111319|CLDN22|53842|claudin 22##NM_001185149|CLDN24|100132463|claudin 24	0.99413	CTCF.p2:-10:0.994
chr6	5143994	5144114	reg1000150.p1	20.118	+	NM_001145115	-58335	+	TSC_hg19_v1_chr6_+_5030223 BC042032 BC133670	-113821	+	TSC_hg19_v1_chr6_-_5004262 BC017871 NM_006638	-139784	-	AF088060 EU831799 EU831876 TSC_hg19_v1_chr6_-_5260976 AK309661 AK291158 BC067762 AF170070 AF285118 BC009552	116943	-	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	117112	-	TSC_hg19_v1_chr6_+_5261294 AK312454	117208	+	NM_001145115|PPP1R3G|648791|protein phosphatase 1, regulatory subunit 3G##BC042032|LOC100129461|100129461|uncharacterized LOC100129461##BC133670|LOC100129461|100129461|uncharacterized LOC100129461##BC017871|RPP40|10799|ribonuclease P/MRP 40kDa subunit##NM_006638|RPP40|10799|ribonuclease P/MRP 40kDa subunit##AF088060|LYRM4|57128|LYR motif containing 4##EU831799|LYRM4|57128|LYR motif containing 4##EU831876|LYRM4|57128|LYR motif containing 4##AK309661|LYRM4|57128|LYR motif containing 4##AK291158|LYRM4|57128|LYR motif containing 4##BC067762|LYRM4|57128|LYR motif containing 4##AF170070|LYRM4|57128|LYR motif containing 4##AF285118|LYRM4|57128|LYR motif containing 4##BC009552|LYRM4|57128|LYR motif containing 4##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial	0.999013	CTCF.p2:-10:0.999
chr19	42612798	42612907	reg1000072.p1	20.115	+	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	-32486	+	TSC_hg19_v1_chr19_+_42580286 NM_022752	-32570	+	S40369 AJ249209 BC131717 NM_002088	-42914	-	M36718 X13809 BT007438 AB590941 TSC_hg19_v1_chr19_-_42636564 BC006101 M36653 NM_001207025 NM_001207026 NM_001247994 NM_002698 X53468	23739	-	TSC_hg19_v1_chr19_-_42721830 BC027930 NM_133328 AY125488 BC013372 AK307895 AK130203 AK075328	108987	-	TSC_hg19_v1_chr19_+_42724463 AK298895 AB075831 NM_133444	111612	+	AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574##NM_022752|ZNF574|64763|zinc finger protein 574##S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##M36718|POU2F2|5452|POU class 2 homeobox 2##X13809|POU2F2|5452|POU class 2 homeobox 2##BT007438|POU2F2|5452|POU class 2 homeobox 2##BC006101|POU2F2|5452|POU class 2 homeobox 2##M36653|POU2F2|5452|POU class 2 homeobox 2##NM_001207025|POU2F2|5452|POU class 2 homeobox 2##NM_001207026|POU2F2|5452|POU class 2 homeobox 2##NM_001247994|POU2F2|5452|POU class 2 homeobox 2##NM_002698|POU2F2|5452|POU class 2 homeobox 2##X53468|POU2F2|5452|POU class 2 homeobox 2##BC027930|DEDD2|162989|death effector domain containing 2##NM_133328|DEDD2|162989|death effector domain containing 2##AY125488|DEDD2|162989|death effector domain containing 2##BC013372|DEDD2|162989|death effector domain containing 2##AK307895|DEDD2|162989|death effector domain containing 2##AK130203|DEDD2|162989|death effector domain containing 2##AK075328|DEDD2|162989|death effector domain containing 2##AK298895|ZNF526|116115|zinc finger protein 526##AB075831|ZNF526|116115|zinc finger protein 526##NM_133444|ZNF526|116115|zinc finger protein 526	0.33547	CTCF.p2:-28:0.335
chr10	85965474	85965592	reg1000142.p1	20.107	+	AB593154 TSC_hg19_v1_chr10_+_85954408 AB593155 BC038799 NM_001171971 NM_033100 AB463200 AB053448	-11080	+	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	-31974	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	-33741	-	BX648524 NM_001017924 BC140765 BC144475	19780	-	AB463829 AB031547 NM_015613 DQ426882 DQ426881	35734	-	BX641033 NM_001012720 NM_001012722 NM_002921 U14910 BC011349 BC008094 BC042536 CU675929 DQ892074 DQ895267	39294	+	AB593154|CDHR1|92211|cadherin-related family member 1##AB593155|CDHR1|92211|cadherin-related family member 1##BC038799|CDHR1|92211|cadherin-related family member 1##NM_001171971|CDHR1|92211|cadherin-related family member 1##NM_033100|CDHR1|92211|cadherin-related family member 1##AB053448|CDHR1|92211|cadherin-related family member 1##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##BX648524|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##NM_001017924|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC140765|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC144475|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##AB031547|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##NM_015613|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##BX641033|RGR|5995|retinal G protein coupled receptor##NM_001012720|RGR|5995|retinal G protein coupled receptor##NM_001012722|RGR|5995|retinal G protein coupled receptor##NM_002921|RGR|5995|retinal G protein coupled receptor##U14910|RGR|5995|retinal G protein coupled receptor##BC011349|RGR|5995|retinal G protein coupled receptor##BC008094|RGR|5995|retinal G protein coupled receptor##BC042536|RGR|5995|retinal G protein coupled receptor##DQ892074|RGR|5995|retinal G protein coupled receptor##DQ895267|RGR|5995|retinal G protein coupled receptor	0.021933	
chr11	117714822	117714955	reg1000085.p1	20.104	+	BT006721 BC005302 NM_021603	-16122	-	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	-19454	-	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	-46929	-	AL136699 TSC_hg19_v1_chr11_-_117747374 AY358976 BC018652 BC093040 AK311736 AL832811 AK290757	32501	-	TSC_hg19_v1_chr11_-_117747623 AK289629 NM_001164832 NM_001164836 NM_001164837 NM_001204268 NM_001243598 NM_022003	32793	-	NM_001164831	33312	-	BT006721|FXYD2|486|FXYD domain containing ion transport regulator 2##BC005302|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_021603|FXYD2|486|FXYD domain containing ion transport regulator 2##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2##AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6##AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK289629|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164832|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164836|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164837|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001204268|FXYD6-FXYD2|100533181|FXYD6-FXYD2 readthrough##NM_001243598|FXYD6-FXYD2|100533181|FXYD6-FXYD2 readthrough##NM_022003|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164831|FXYD6|53826|FXYD domain containing ion transport regulator 6	0.991532	CTCF.p2:-9:0.992
chr1	201377450	201377570	reg1000164.p1	20.094	+	TSC_hg19_v1_chr1_-_201368726 BC071890	-8769	-	BX647307 U42408 TSC_hg19_v1_chr1_-_201368661 BC009742 NM_005558	-8865	-	DQ893656 DQ895808 TSC_hg19_v1_chr1_-_201368483 AK310917 AK313388	-9044	-	AJ315823 BC012601 TSC_hg19_v1_chr1_-_201390859 AK223588 J04760 AK311896 AL831820 AL831975 BC012600 BX510903 NM_003281	13349	-	BC014390 TSC_hg19_v1_chr1_-_201438317 AF151100 AK075179 AK222644 BC068273 NM_012396	60755	-	AK293053 NM_001193572	88190	-	BC071890|LAD1|3898|ladinin 1##BX647307|LAD1|3898|ladinin 1##U42408|LAD1|3898|ladinin 1##BC009742|LAD1|3898|ladinin 1##NM_005558|LAD1|3898|ladinin 1##DQ893656|LAD1|3898|ladinin 1##DQ895808|LAD1|3898|ladinin 1##AK310917|LAD1|3898|ladinin 1##AK313388|LAD1|3898|ladinin 1##AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)##AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)##J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)##AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)##AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)##AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)##BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)##NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC014390|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AF151100|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK075179|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK222644|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##BC068273|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##NM_012396|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK293053|CSRP1|1465|cysteine and glycine-rich protein 1##NM_001193572|CSRP1|1465|cysteine and glycine-rich protein 1	0.62407	CTCF.p2:7:0.624
chr5	79387663	79387801	reg1000194.p1	20.068	+	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-56568	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-100774	-	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-402060	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	164153	-	NM_032567 AK098575 AK314007 AF333098 BC033798	228083	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	316121	+	BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16	0.99916	CTCF.p2:-11:0.999
chr16	68834268	68834403	reg1000133.p1	20.058	+	TSC_hg19_v1_chr16_+_68771304 Z18923	-63024	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	-63090	+	BC144283 TSC_hg19_v1_chr16_+_68771216 AK290012 Z13009	-63116	+	TSC_hg19_v1_chr16_+_68877504 BC092500 AB051533 NM_024562 AB463318	43170	+	AK291400 NM_001199280	305131	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	305805	+	Z18923|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC144283|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK290012|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##Z13009|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC092500|TMCO7|79613|transmembrane and coiled-coil domains 7##AB051533|TMCO7|79613|transmembrane and coiled-coil domains 7##NM_024562|TMCO7|79613|transmembrane and coiled-coil domains 7##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3	0.048426	
chr3	45970645	45970769	reg1000138.p1	20.051	+	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	-42652	+	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	-87112	-	TSC_hg19_v1_chr3_-_45838112 AF125107	-132559	-	NM_006564 Y13248	14265	+	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	66614	-	AB189434 AB189435 NM_001024644 NM_005283	98271	-	NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1	0.995225	CTCF.p2:24:0.983
chr16	89233964	89234084	reg1000135.p1	20.044	+	TSC_hg19_v1_chr16_+_89213949 AK090408	-20078	+	TSC_hg19_v1_chr16_+_89160285 BC028399 AK290963 BC064609 BC072391 AK075499	-73717	+	NM_001127214 NM_001243279 NM_174917 TSC_hg19_v1_chr16_+_89160259	-73787	+	TSC_hg19_v1_chr16_+_89238171 D83542 NM_004933 AK308596 AK308631 BC008951 DQ893277 DQ896608	4175	+	NM_001242757	32504	-	TSC_hg19_v1_chr16_+_89284112 NM_001201407 NM_182531 AK056437 AK295122	50103	+	BC028399|ACSF3|197322|acyl-CoA synthetase family member 3##AK290963|ACSF3|197322|acyl-CoA synthetase family member 3##BC064609|ACSF3|197322|acyl-CoA synthetase family member 3##BC072391|ACSF3|197322|acyl-CoA synthetase family member 3##AK075499|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001127214|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001243279|ACSF3|197322|acyl-CoA synthetase family member 3##NM_174917|ACSF3|197322|acyl-CoA synthetase family member 3##D83542|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##NM_004933|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##AK308631|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##BC008951|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##DQ893277|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##DQ896608|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##NM_001242757|SLC22A31|146429|solute carrier family 22, member 31##NM_001201407|ZNF778|197320|zinc finger protein 778##NM_182531|ZNF778|197320|zinc finger protein 778##AK056437|ZNF778|197320|zinc finger protein 778	0.920095	CTCF.p2:24:0.920
chr2	98313854	98313966	reg1000046.p1	20.038	+	TSC_hg19_v1_chr2_-_98280591 NM_005735	-33336	-	TSC_hg19_v1_chr2_-_98280472 CU678694 DQ893438 DQ896748 AB528334 BC006372 X82207 BC004374 BC010090	-33480	-	TSC_hg19_v1_chr2_-_98275064 BC025274	-38830	-	L05148 NM_001079 AK303341 AK310637 AK310628 BC053878	16132	+	AB083211 NM_207519	36958	+	AK025852 TSC_hg19_v1_chr2_-_98408976	95012	-	NM_005735|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##DQ893438|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##DQ896748|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC006372|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##X82207|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC004374|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC010090|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC025274|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##L05148|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_001079|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK303341|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310637|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310628|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##BC053878|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AB083211|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_207519|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK025852|TMEM131|23505|transmembrane protein 131	0.996239	CTCF.p2:17:0.996
chr11	36768751	36768877	reg1000101.p2	20.031	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-149012	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-152710	+	NM_000448 M29474	-179246	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	3545780	-	AB046800 NM_020929	3546849	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	6564704	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	1.992634	CTCF.p2:-34:0.994	CTCF.p2:38:0.999
chr1	205242720	205242842	reg1000082.p1	20.030	+	AY358192 TSC_hg19_v1_chr1_+_205236667	-6147	+	AK293734 NM_001242925	-44723	+	TSC_hg19_v1_chr1_+_205197073 AB007950 NM_014858 AK131419	-45698	+	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	48062	-	BC036076 TSC_hg19_v1_chr1_-_205313311	70529	-	AK299227 AK001610 NM_018203 AK096590	83259	-	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK293734|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_001242925|TMCC2|9911|transmembrane and coiled-coil domain family 2##AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2##AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC036076|KLHDC8A|55220|kelch domain containing 8A##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A	0.99539	CTCF.p2:-11:0.995
chr1	21695090	21695217	reg1000163.p1	20.023	+	X98272 TSC_hg19_v1_chr1_-_21671998 NM_001113348	-23173	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	-78219	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	-78445	-	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	71529	+	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	140706	+	TSC_hg19_v1_chr1_+_21835918 AK295608 AK312667 AK298085 BC021289 BC066116 BC090861 AB011406 AH007388 X95994 AK293184 BC110909	140779	+	X98272|ECE1|1889|endothelin converting enzyme 1##NM_001113348|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK295608|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK312667|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK298085|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC021289|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC066116|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC090861|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB011406|ALPL|249|alkaline phosphatase, liver/bone/kidney##X95994|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK293184|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC110909|ALPL|249|alkaline phosphatase, liver/bone/kidney	0.932206	CTCF.p2:11:0.932
chr20	45901674	45901800	reg1000191.p1	20.007	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	-378185	+	TSC_hg19_v1_chr20_+_45523505 BC008803	-378229	+	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	-378455	+	TSC_hg19_v1_chr20_-_45927496 BC030721	25832	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	74910	-	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	83751	-	AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8	0.99345	CTCF.p2:-8:0.993
chr17	26821858	26821987	reg1000219.p1	19.998	+	TSC_hg19_v1_chr17_+_26800661 AK314684 NM_001145975 NM_001145976 NM_003984 U26209 BC096276 BC096277 BC096278 BC096279 AK091926 AK298388 AK303909 AK303936	-21216	+	CU678258 TSC_hg19_v1_chr17_+_26794963	-27019	+	AK295883 TSC_hg19_v1_chr17_-_26733231 BC010691 AK054669 NM_001242366 NM_080669	-88707	-	NM_003593 Y11739	29036	+	AF028788 AF028789 TSC_hg19_v1_chr17_-_26879616 AK292329 BC027176 U40998	57688	-	NM_005148 NM_054035 TSC_hg19_v1_chr17_-_26879647 AB593014	57730	-	AK314684|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145975|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145976|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_003984|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##U26209|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096276|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096277|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096278|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096279|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK091926|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK298388|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303909|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303936|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK295883|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##BC010691|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##AK054669|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##NM_001242366|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##NM_080669|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##NM_003593|FOXN1|8456|forkhead box N1##Y11739|FOXN1|8456|forkhead box N1##AF028788|UNC119|9094|unc-119 homolog (C. elegans)##AF028789|UNC119|9094|unc-119 homolog (C. elegans)##AK292329|UNC119|9094|unc-119 homolog (C. elegans)##BC027176|UNC119|9094|unc-119 homolog (C. elegans)##U40998|UNC119|9094|unc-119 homolog (C. elegans)##NM_005148|UNC119|9094|unc-119 homolog (C. elegans)##NM_054035|UNC119|9094|unc-119 homolog (C. elegans)##AB593014|UNC119|9094|unc-119 homolog (C. elegans)	1.018817	CTCF.p2:-15:1.000
chr12	5131754	5131868	reg1000143.p1	19.992	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	-112751	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	-213396	+	AJ271385 NM_017417 BC140888 BC140889	-302043	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	21308	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	409465	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	471527	+	NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3	0.935028	CTCF.p2:-7:0.935
chr3	58518597	58518717	reg1000166.p1	19.987	+	AK074934 NM_153331	-34566	+	TSC_hg19_v1_chr3_+_58477822 NM_001128214 AK075297	-40819	+	M34056 M19123 BC004115 AB528205 AM392999 AM393278 CR541911 CU674222 DQ891366 DQ894546 M34479 M34055 M54788 AB209241 AL117618 AK293153 BC000439 BC001924 TSC_hg19_v1_chr3_-_58419557 AK225569 AK311514 AK313022 J03576 X57778 AK225621 NM_000925 NM_001173468	-99175	-	AK298402 AK313512 BC033517 BC047700 TSC_hg19_v1_chr3_-_58522918 NM_003500	4243	-	AB023811 TSC_hg19_v1_chr3_-_58563116 BC010561 AL050264 AK055443 AK128791 BC093012	44452	-	AF035283 NM_001076778 NM_007177	44833	-	AK074934|KCTD6|200845|potassium channel tetramerisation domain containing 6##NM_153331|KCTD6|200845|potassium channel tetramerisation domain containing 6##NM_001128214|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK075297|KCTD6|200845|potassium channel tetramerisation domain containing 6##M34056|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M19123|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC004115|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM392999|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM393278|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##CR541911|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ891366|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ894546|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34479|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34055|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M54788|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AB209241|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AL117618|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK293153|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC000439|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC001924|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225569|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK311514|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK313022|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##J03576|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##X57778|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225621|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_000925|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_001173468|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK298402|ACOX2|8309|acyl-CoA oxidase 2, branched chain##AK313512|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC033517|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC047700|ACOX2|8309|acyl-CoA oxidase 2, branched chain##NM_003500|ACOX2|8309|acyl-CoA oxidase 2, branched chain##AB023811|FAM107A|11170|family with sequence similarity 107, member A##BC010561|FAM107A|11170|family with sequence similarity 107, member A##AL050264|FAM107A|11170|family with sequence similarity 107, member A##AK055443|FAM107A|11170|family with sequence similarity 107, member A##AK128791|FAM107A|11170|family with sequence similarity 107, member A##BC093012|FAM107A|11170|family with sequence similarity 107, member A##AF035283|FAM107A|11170|family with sequence similarity 107, member A##NM_001076778|FAM107A|11170|family with sequence similarity 107, member A##NM_007177|FAM107A|11170|family with sequence similarity 107, member A	0.99988	CTCF.p2:3:1.000
chr1	175288875	175289010	reg1000157.p1	19.983	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-126912	-	AK127044 NM_022093	-251949	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-296371	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	423768	-	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	887223	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	887376	-	D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2	0.99964	CTCF.p2:15:1.000
chr1	27611288	27611401	reg1000081.p2	19.982	+	TSC_hg19_v1_chr1_+_27561153 BC032523	-50182	+	TSC_hg19_v1_chr1_+_27561124 AK315564	-50217	+	NM_015023 TSC_hg19_v1_chr1_+_27561056	-50310	+	TSC_hg19_v1_chr1_+_27648669 NM_032125 AK313110 AK303821	37307	+	AL136683 BC011579 BC090039 TSC_hg19_v1_chr1_+_27648745	37389	+	TSC_hg19_v1_chr1_+_27648756 EU831420 EU831513 AF251699 AK222642 AK307077 BX648289	37472	+	BC032523|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##NM_032125|TMEM222|84065|transmembrane protein 222##AK313110|TMEM222|84065|transmembrane protein 222##AK303821|TMEM222|84065|transmembrane protein 222##AL136683|TMEM222|84065|transmembrane protein 222##BC011579|TMEM222|84065|transmembrane protein 222##BC090039|TMEM222|84065|transmembrane protein 222##EU831420|TMEM222|84065|transmembrane protein 222##EU831513|TMEM222|84065|transmembrane protein 222##AF251699|TMEM222|84065|transmembrane protein 222##AK222642|TMEM222|84065|transmembrane protein 222##AK307077|TMEM222|84065|transmembrane protein 222##BX648289|LOC644961|644961|actin, beta pseudogene	0.965525	CTCF.p2:4:0.966
chr20	1294278	1294404	reg1000106.p1	19.971	+	AB464263 AJ292245 AF131809 NM_015685	-128	-	BC035788 NM_014723 AB002372 AF187733	-47363	+	BC157891 BC171911 NM_001136566	-87578	+	TSC_hg19_v1_chr20_+_1306062 BC034773 AK055993	11710	+	AF159228 NM_001199784	12171	-	AK296577 TSC_hg19_v1_chr20_-_1309784	15444	-	AJ292245|SDCBP2|27111|syndecan binding protein (syntenin) 2##AF131809|SDCBP2|27111|syndecan binding protein (syntenin) 2##NM_015685|SDCBP2|27111|syndecan binding protein (syntenin) 2##BC035788|SNPH|9751|syntaphilin##NM_014723|SNPH|9751|syntaphilin##AB002372|SNPH|9751|syntaphilin##AF187733|SNPH|9751|syntaphilin##BC157891|RAD21L1|642636|RAD21-like 1 (S. pombe)##BC171911|RAD21L1|642636|RAD21-like 1 (S. pombe)##NM_001136566|RAD21L1|642636|RAD21-like 1 (S. pombe)##BC034773|LOC100507495|100507495|uncharacterized LOC100507495##AK055993|LOC100507495|100507495|uncharacterized LOC100507495##AF159228|SDCBP2|27111|syndecan binding protein (syntenin) 2##NM_001199784|SDCBP2|27111|syndecan binding protein (syntenin) 2##AK296577|SDCBP2|27111|syndecan binding protein (syntenin) 2	0.997457	CTCF.p2:-19:0.997
chr3	127371134	127371274	reg1000244.p1	19.956	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-23172	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-53920	+	AK304204 BC017258 TSC_hg19_v1_chr3_+_127317271	-53933	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	20613	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	170226	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	170938	-	BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##AK304204|MCM2|4171|minichromosome maintenance complex component 2##BC017258|MCM2|4171|minichromosome maintenance complex component 2##NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase	0.886527	CTCF.p2:-11:0.887
chr1	20244627	20244753	reg1000193.p1	19.950	+	TSC_hg19_v1_chr1_+_20208923 AB385337	-35727	+	TSC_hg19_v1_chr1_+_20208920 AB007928	-35776	+	TSC_hg19_v1_chr1_+_20208887 NM_015207	-35826	+	AB464018 AF189279 BC069116 NM_014589	5390	-	M22430 AK291302 NM_001161729	61432	-	BC005919 NM_000300 NM_001161727 NM_001161728	62229	-	AB007928|OTUD3|23252|OTU domain containing 3##NM_015207|OTUD3|23252|OTU domain containing 3##AF189279|PLA2G2E|30814|phospholipase A2, group IIE##BC069116|PLA2G2E|30814|phospholipase A2, group IIE##NM_014589|PLA2G2E|30814|phospholipase A2, group IIE##M22430|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##AK291302|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161729|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##BC005919|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_000300|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161727|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161728|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)	0.996342	CTCF.p2:-10:0.983
chr20	31240825	31240949	reg1000205.p1	19.943	+	BC105014 BC105042 AK091025 AX746738 NM_182584	-1217	-	BC023657 BC065483 TSC_hg19_v1_chr20_-_31172902	-67964	-	BC038088 TSC_hg19_v1_chr20_-_31071385	-169496	-	AY542162 TSC_hg19_v1_chr20_-_31331262 BC000628 AK097059 AK027893	90366	-	BC047440 TSC_hg19_v1_chr20_-_31331396	90498	-	AK096307 BC022073 NM_001099339 NM_053041	90920	-	BC105014|C20orf203|284805|chromosome 20 open reading frame 203##BC105042|C20orf203|284805|chromosome 20 open reading frame 203##AK091025|C20orf203|284805|chromosome 20 open reading frame 203##NM_182584|C20orf203|284805|chromosome 20 open reading frame 203##BC023657|LOC284804|284804|uncharacterized LOC284804##BC065483|LOC284804|284804|uncharacterized LOC284804##BC038088|C20orf112|140688|chromosome 20 open reading frame 112##AY542162|COMMD7|149951|COMM domain containing 7##BC000628|COMMD7|149951|COMM domain containing 7##AK097059|COMMD7|149951|COMM domain containing 7##AK027893|COMMD7|149951|COMM domain containing 7##BC047440|COMMD7|149951|COMM domain containing 7##AK096307|COMMD7|149951|COMM domain containing 7##BC022073|COMMD7|149951|COMM domain containing 7##NM_001099339|COMMD7|149951|COMM domain containing 7##NM_053041|COMMD7|149951|COMM domain containing 7	0.99886	CTCF.p2:18:0.999
chr17	79075654	79075769	reg1000120.p1	19.931	+	BC032559 BC014020 AB015019 AB015020 AB017119 AB017120 U70669 TSC_hg19_v1_chr17_+_79008989 BC002495 DQ893456 DQ896329 AB528742 CU680744 CU689422	-66706	+	TSC_hg19_v1_chr17_+_79008950 NM_001144888 NM_006340 NM_017450 NM_017451 AK298629 AK023688 AK222670 AK225612 AK297644	-66762	+	AK124762 TSC_hg19_v1_chr17_-_79008489 AK056555	-67264	-	AB014541 NM_004920 TSC_hg19_v1_chr17_-_79105774	30051	-	AK131529 NM_001080395 TSC_hg19_v1_chr17_-_79139926	64194	-	TSC_hg19_v1_chr17_-_79196766 BC136578 BC136580 BC144263 BC012130 NM_001009811 NM_014984 AB029041	121055	-	BC032559|BAIAP2|10458|BAI1-associated protein 2##BC014020|BAIAP2|10458|BAI1-associated protein 2##AB015019|BAIAP2|10458|BAI1-associated protein 2##AB015020|BAIAP2|10458|BAI1-associated protein 2##AB017119|BAIAP2|10458|BAI1-associated protein 2##AB017120|BAIAP2|10458|BAI1-associated protein 2##U70669|BAIAP2|10458|BAI1-associated protein 2##BC002495|BAIAP2|10458|BAI1-associated protein 2##DQ893456|BAIAP2|10458|BAI1-associated protein 2##DQ896329|BAIAP2|10458|BAI1-associated protein 2##NM_001144888|BAIAP2|10458|BAI1-associated protein 2##NM_006340|BAIAP2|10458|BAI1-associated protein 2##NM_017450|BAIAP2|10458|BAI1-associated protein 2##NM_017451|BAIAP2|10458|BAI1-associated protein 2##AK298629|BAIAP2|10458|BAI1-associated protein 2##AK023688|BAIAP2|10458|BAI1-associated protein 2##AK222670|BAIAP2|10458|BAI1-associated protein 2##AK225612|BAIAP2|10458|BAI1-associated protein 2##AK297644|BAIAP2|10458|BAI1-associated protein 2##AK124762|FLJ90757|440465|uncharacterized LOC440465##AK056555|FLJ90757|440465|uncharacterized LOC440465##AB014541|AATK|9625|apoptosis-associated tyrosine kinase##NM_004920|AATK|9625|apoptosis-associated tyrosine kinase##AK131529|AATK|9625|apoptosis-associated tyrosine kinase##NM_001080395|AATK|9625|apoptosis-associated tyrosine kinase##BC136578|AZI1|22994|5-azacytidine induced 1##BC136580|AZI1|22994|5-azacytidine induced 1##BC144263|AZI1|22994|5-azacytidine induced 1##BC012130|AZI1|22994|5-azacytidine induced 1##NM_001009811|AZI1|22994|5-azacytidine induced 1##NM_014984|AZI1|22994|5-azacytidine induced 1##AB029041|AZI1|22994|5-azacytidine induced 1	1.218514	CTCF.p2:26:0.900	CTCF.p2:-104:0.319
chr16	10603528	10603674	reg1000226.p1	19.929	+	NM_024997 BC137079 BC144468	-80861	+	AK093414 AX748112 TSC_hg19_v1_chr16_+_10479917 AK296565 AK299040 BC033891 BC041882	-123684	+	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	-326924	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	70889	-	HQ258441 BC130336 BC130338 AK057433 NM_144674	185164	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	234103	+	NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1	0.999456	CTCF.p2:18:0.999
chr19	47940024	47940146	reg1000155.p1	19.914	+	TSC_hg19_v1_chr19_-_47922785 NM_001009813 NM_020160	-17322	-	TSC_hg19_v1_chr19_-_47922468 BC025404	-17579	-	TSC_hg19_v1_chr19_-_47922396 BC069251	-17687	-	TSC_hg19_v1_chr19_-_47975151 AK293836 AB029010 AK293860 AK293457	35062	-	TSC_hg19_v1_chr19_-_47975247 AK302552 NM_015063	35190	-	TSC_hg19_v1_chr19_-_47987466 AK298672 BC009249 AF105369 AK225419 AK023996	47357	-	NM_001009813|MEIS3|56917|Meis homeobox 3##NM_020160|MEIS3|56917|Meis homeobox 3##BC025404|MEIS3|56917|Meis homeobox 3##BC069251|MEIS3|56917|Meis homeobox 3##AK293836|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AB029010|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AK293860|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AK293457|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AK302552|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##NM_015063|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AK298672|KPTN|11133|kaptin (actin binding protein)##BC009249|KPTN|11133|kaptin (actin binding protein)##AF105369|KPTN|11133|kaptin (actin binding protein)##AK225419|KPTN|11133|kaptin (actin binding protein)##AK023996|KPTN|11133|kaptin (actin binding protein)	0.999175	CTCF.p2:-16:0.999
chr8	8130839	8130967	reg1000196.p1	19.898	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-44761	+	AK292586 NM_001193630	-347045	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-378699	+	TSC_hg19_v1_chr8_-_8175862 AF075060	44985	-	AK122582 NM_001080826	108319	-	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	428795	+	BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23	0.987858	CTCF.p2:-12:0.988
chr11	34196012	34196109	reg1000056.p2	19.852	+	TSC_hg19_v1_chr11_+_34127208 AK294044 AL136882 AK001636 BC014440 BC020205	-68810	+	NM_001144030 NM_024662 TSC_hg19_v1_chr11_+_34127175 AK022241 AK225341 BC035558 AB051496	-68903	+	TSC_hg19_v1_chr11_+_34073956 EU176359 EU176467 EU176701	-122023	+	TSC_hg19_v1_chr11_-_34379556 AK291744 NM_145804	183495	-	TSC_hg19_v1_chr11_+_34460487 AK291585 NM_001752 BC110398 AK315350 X04076 BC112217 BC112219	264414	+	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	264489	+	AK294044|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AL136882|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK001636|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC014440|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC020205|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_001144030|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_024662|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK022241|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK225341|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC035558|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AB051496|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##EU176359|CAPRIN1|4076|cell cycle associated protein 1##EU176467|CAPRIN1|4076|cell cycle associated protein 1##EU176701|CAPRIN1|4076|cell cycle associated protein 1##AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##AK291585|CAT|847|catalase##NM_001752|CAT|847|catalase##BC110398|CAT|847|catalase##AK315350|CAT|847|catalase##X04076|CAT|847|catalase##BC112217|CAT|847|catalase##BC112219|CAT|847|catalase##AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase	0.893176	CTCF.p2:-6:0.893
chr1	108668262	108668384	reg1000153.p1	19.848	+	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	-160723	-	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	-437199	-	AB023193 TSC_hg19_v1_chr1_+_107683657	-984719	+	AJ619961 NM_213651 AK292567	67073	-	AF123303 EU832524 EU832606 AJ619987 TSC_hg19_v1_chr1_-_108742797 AK316506	74447	-	TSC_hg19_v1_chr1_-_108742870 BC014519 BC068561	74518	-	AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AB023193|NTNG1|22854|netrin G1##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##BC014519|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##BC068561|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.992867	CTCF.p2:18:0.993
chr16	67678674	67678802	reg1000171.p1	19.831	+	AK314804 NM_001191022 NM_006565 TSC_hg19_v1_chr16_+_67596455 U25435 AB209793 BC014267	-82344	+	BC041086 AK023787 TSC_hg19_v1_chr16_+_67573861 BC098587	-104874	+	AK097087 TSC_hg19_v1_chr16_+_67572105	-106694	+	TSC_hg19_v1_chr16_+_67679038 AB113647 NM_001013838	288	+	TSC_hg19_v1_chr16_+_67679059 FJ026014 AL832446	379	+	TSC_hg19_v1_chr16_+_67686881 BC043154	8150	+	AK314804|CTCF|10664|CCCTC-binding factor (zinc finger protein)##NM_001191022|CTCF|10664|CCCTC-binding factor (zinc finger protein)##NM_006565|CTCF|10664|CCCTC-binding factor (zinc finger protein)##U25435|CTCF|10664|CCCTC-binding factor (zinc finger protein)##AB209793|CTCF|10664|CCCTC-binding factor (zinc finger protein)##BC014267|CTCF|10664|CCCTC-binding factor (zinc finger protein)##BC041086|FAM65A|79567|family with sequence similarity 65, member A##AK023787|FAM65A|79567|family with sequence similarity 65, member A##BC098587|FAM65A|79567|family with sequence similarity 65, member A##AK097087|FAM65A|79567|family with sequence similarity 65, member A##AB113647|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##NM_001013838|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##FJ026014|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##AL832446|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##BC043154|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing	0.365201	CTCF.p2:25:0.365
chr11	46911302	46911424	reg1000234.p1	19.824	+	TSC_hg19_v1_chr11_-_46867841 NM_001008938 NM_014756	-43510	-	TSC_hg19_v1_chr11_-_46867830 BC111043 AK092678 AX747668 BC017856 BC070136	-43551	-	TSC_hg19_v1_chr11_+_46740780 BC051332 AK222775 AK222777 AK293326 EU832664 EU832742 AB591029 V00595	-170577	+	TSC_hg19_v1_chr11_-_46940102 AB384531 AB231861 BC136667 BC136668 AB084910 NM_002334 BC110808	28699	-	TSC_hg19_v1_chr11_+_46958328 AK316318 NM_001003676 NM_001003677 NM_001003678 NM_024113 AK315639 BC001860 BC009455 AL136575 BC052291 BC013988 AK300813 AK025863 AK293609 AB528079 AM393584 AM393807 CR457351 CU679361 CU680726	46929	+	AK301785 AL834337 EU832352 EU832437 AK300347 BC036823 AK027482 TSC_hg19_v1_chr11_-_47198413 AK304541 BC030148	287036	-	NM_001008938|CKAP5|9793|cytoskeleton associated protein 5##NM_014756|CKAP5|9793|cytoskeleton associated protein 5##BC111043|CKAP5|9793|cytoskeleton associated protein 5##BC017856|CKAP5|9793|cytoskeleton associated protein 5##BC070136|CKAP5|9793|cytoskeleton associated protein 5##BC051332|F2|2147|coagulation factor II (thrombin)##AK222775|F2|2147|coagulation factor II (thrombin)##AK222777|F2|2147|coagulation factor II (thrombin)##AK293326|F2|2147|coagulation factor II (thrombin)##EU832664|F2|2147|coagulation factor II (thrombin)##EU832742|F2|2147|coagulation factor II (thrombin)##V00595|F2|2147|coagulation factor II (thrombin)##AB231861|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136667|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136668|LRP4|4038|low density lipoprotein receptor-related protein 4##AB084910|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_002334|LRP4|4038|low density lipoprotein receptor-related protein 4##AK316318|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003676|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003677|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003678|C11orf49|79096|chromosome 11 open reading frame 49##NM_024113|C11orf49|79096|chromosome 11 open reading frame 49##AK315639|C11orf49|79096|chromosome 11 open reading frame 49##BC001860|C11orf49|79096|chromosome 11 open reading frame 49##BC009455|C11orf49|79096|chromosome 11 open reading frame 49##AL136575|C11orf49|79096|chromosome 11 open reading frame 49##BC052291|C11orf49|79096|chromosome 11 open reading frame 49##BC013988|C11orf49|79096|chromosome 11 open reading frame 49##AK300813|C11orf49|79096|chromosome 11 open reading frame 49##AK025863|C11orf49|79096|chromosome 11 open reading frame 49##AK293609|C11orf49|79096|chromosome 11 open reading frame 49##AM393584|C11orf49|79096|chromosome 11 open reading frame 49##AM393807|C11orf49|79096|chromosome 11 open reading frame 49##CR457351|C11orf49|79096|chromosome 11 open reading frame 49##AK301785|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AL834337|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832352|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832437|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300347|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC036823|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK027482|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK304541|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC030148|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2	0.986728	CTCF.p2:-15:0.987
chr14	94406115	94406244	reg1000096.p1	19.797	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	-12471	+	NM_001207071 NM_138344 AK093387 AX748092	-20931	+	AY225516 AY225517 NM_178013	-151414	-	AB056723 NM_016150	17587	-	AK303686 TSC_hg19_v1_chr14_-_94442905	36729	-	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	36897	-	NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2	1.378731	CTCF.p2:-20:0.985	CTCF.p2:107:0.393
chr2	30929988	30930119	reg1000184.p1	19.787	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	-259905	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-475551	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-560177	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	100240	-	AK122747 NM_001253827	422444	-	AY358758 AK225808 TSC_hg19_v1_chr2_-_31361308	431245	-	BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AY358758|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AK225808|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.999284	CTCF.p2:9:0.999
chr17	17763636	17763763	reg1000186.p1	19.779	+	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	-23375	-	TSC_hg19_v1_chr17_-_17740301 U00968 BC063281	-23404	-	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	-36795	-	TSC_hg19_v1_chr17_-_17875715 AK124331 AK295111 AK301944 AK303305 AK299872 AF467441 BC051650 AK294846 NM_001033551 NM_001082968	112042	-	NM_001130090 NM_001130091 NM_001130092 NM_031294 TSC_hg19_v1_chr17_+_17876186 BC047873 AL136926 AK293011 BC040276 BC050419 BC050665 AK093317 AX748051	112501	+	AM393241 CU678578 CU689282 AB528073 AF070584 BC032126 AF052185 AY203943 TSC_hg19_v1_chr17_-_17942481 BC004114 NM_145691 AK290257 AK294487 AK296382	178704	-	BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1##U00968|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC063281|SREBF1|6720|sterol regulatory element binding transcription factor 1##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK124331|TOM1L2|146691|target of myb1-like 2 (chicken)##AK295111|TOM1L2|146691|target of myb1-like 2 (chicken)##AK301944|TOM1L2|146691|target of myb1-like 2 (chicken)##AK303305|TOM1L2|146691|target of myb1-like 2 (chicken)##AK299872|TOM1L2|146691|target of myb1-like 2 (chicken)##AF467441|TOM1L2|146691|target of myb1-like 2 (chicken)##BC051650|TOM1L2|146691|target of myb1-like 2 (chicken)##AK294846|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001033551|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001082968|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001130090|LRRC48|83450|leucine rich repeat containing 48##NM_001130091|LRRC48|83450|leucine rich repeat containing 48##NM_001130092|LRRC48|83450|leucine rich repeat containing 48##NM_031294|LRRC48|83450|leucine rich repeat containing 48##BC047873|LRRC48|83450|leucine rich repeat containing 48##AL136926|LRRC48|83450|leucine rich repeat containing 48##AK293011|LRRC48|83450|leucine rich repeat containing 48##BC040276|LRRC48|83450|leucine rich repeat containing 48##BC050419|LRRC48|83450|leucine rich repeat containing 48##BC050665|LRRC48|83450|leucine rich repeat containing 48##AK093317|LRRC48|83450|leucine rich repeat containing 48##AM393241|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF070584|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC032126|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF052185|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AY203943|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC004114|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_145691|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK290257|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK294487|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2	0.990127	CTCF.p2:10:0.990
chr3	127689938	127690066	reg1000224.p1	19.773	+	NM_207335 AB590042 AM393308 AM393457	-48100	+	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	-55684	+	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	-147860	-	TSC_hg19_v1_chr3_+_127771248 AK027423 AK074706 NM_013336	81185	+	TSC_hg19_v1_chr3_+_127771300 AL832821 BC002951 AF077032 AF084458	81294	+	TSC_hg19_v1_chr3_+_127771307 AF346602	81320	+	NM_207335|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393308|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393457|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK027423|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AK074706|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##NM_013336|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AL832821|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##BC002951|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF077032|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF084458|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	0.133726	
chr2	48647982	48648115	reg1000148.p1	19.769	+	TSC_hg19_v1_chr2_+_48541851 NM_002158 BC063305	-106230	+	BC130445 BC136480 AK292877 AF176706 AF174599 AK223592 BC043258 AY827075 TSC_hg19_v1_chr2_-_48132864 AK297444 NM_001190274	-515255	-	AK304140 AK315108 NM_025133	-532197	-	AY134855 NM_001135629 NM_001193475 NM_152994 TSC_hg19_v1_chr2_+_48667936 AK172762 AK122900 AY092062 BC111059 AK307755 BC117279 BC143466 BC143463 BC040721	19924	+	AK309740 NM_001198593 TSC_hg19_v1_chr2_+_48757177	109073	+	TSC_hg19_v1_chr2_+_48757357 AK314464 NM_001198595 NM_006873 CR936807	109277	+	NM_002158|FOXN2|3344|forkhead box N2##BC063305|FOXN2|3344|forkhead box N2##BC130445|FBXO11|80204|F-box protein 11##BC136480|FBXO11|80204|F-box protein 11##AK292877|FBXO11|80204|F-box protein 11##AF176706|FBXO11|80204|F-box protein 11##AF174599|FBXO11|80204|F-box protein 11##AK223592|FBXO11|80204|F-box protein 11##BC043258|FBXO11|80204|F-box protein 11##AY827075|FBXO11|80204|F-box protein 11##AK297444|FBXO11|80204|F-box protein 11##NM_001190274|FBXO11|80204|F-box protein 11##AK304140|FBXO11|80204|F-box protein 11##AK315108|FBXO11|80204|F-box protein 11##NM_025133|FBXO11|80204|F-box protein 11##AY134855|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_001135629|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_001193475|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_152994|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK172762|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK122900|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AY092062|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC111059|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK307755|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC117279|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC143466|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC143463|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC040721|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##AK314464|STON1|11037|stonin 1##NM_001198595|STON1|11037|stonin 1##NM_006873|STON1|11037|stonin 1##CR936807|STON1|11037|stonin 1	0.958897	CTCF.p2:7:0.959
chr5	173846668	173846798	reg1000261.p1	19.761	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-373981	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	-374022	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	-430543	+	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	304879	+	NM_000794	1024429	-	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	1058829	+	AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##NM_000794|DRD1|1812|dopamine receptor D1##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1	0.999249	CTCF.p2:-5:0.999
chr17	61556386	61556501	reg1000141.p1	19.756	+	TSC_hg19_v1_chr17_+_61554421 AK296566 AK309514 NM_000789 AK300516 AB208971 J04144	-2015	+	AK095244 NM_001017916 TSC_hg19_v1_chr17_-_61523715 AK301541 AK294403 BC002976 AK303177 AK316606 NM_001915	-32807	-	BC091485 NM_001017917	-38253	-	NM_001178057 NM_152830 BC036375 X16295 AK301988 AK302019 M26657 M29981	5748	+	TSC_hg19_v1_chr17_+_61600692 AK091877 AX747233 NM_030779 NM_173092 BC006334 AK298363 AK296498 AF311913	44281	+	TSC_hg19_v1_chr17_+_61627834 AK294925 NM_005828	71383	+	AK296566|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK309514|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##NM_000789|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK300516|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AB208971|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##J04144|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK095244|CYB561|1534|cytochrome b-561##NM_001017916|CYB561|1534|cytochrome b-561##AK301541|CYB561|1534|cytochrome b-561##AK294403|CYB561|1534|cytochrome b-561##BC002976|CYB561|1534|cytochrome b-561##AK303177|CYB561|1534|cytochrome b-561##AK316606|CYB561|1534|cytochrome b-561##NM_001915|CYB561|1534|cytochrome b-561##BC091485|CYB561|1534|cytochrome b-561##NM_001017917|CYB561|1534|cytochrome b-561##NM_001178057|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##NM_152830|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##X16295|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK301988|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK302019|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##M26657|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##M29981|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK091877|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##NM_030779|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##NM_173092|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##BC006334|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##AK298363|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##AK296498|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##AF311913|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##AK294925|DCAF7|10238|DDB1 and CUL4 associated factor 7##NM_005828|DCAF7|10238|DDB1 and CUL4 associated factor 7	0.998933	CTCF.p2:0:0.999
chr11	117924217	117924355	reg1000221.p1	19.754	+	TSC_hg19_v1_chr11_+_117857155 U00672 BC028082 AB590303 CU688390 DQ891031 DQ893720 AK316146 AB209626	-66999	+	TSC_hg19_v1_chr11_+_117857108 AK291645 AK301484 NM_001558 AK301260 AK316342 AK313049 AK301492	-67196	+	BC018715 AK300283 AB048796 AB048797 BC114928 AY190317 AK027798 TSC_hg19_v1_chr11_-_117800150 NM_001077263 NM_001206789 NM_001206790 NM_001244995	-124169	-	NM_001083947 NM_001173551 NM_001173552 NM_019894 AK304113 AK311290 TSC_hg19_v1_chr11_+_117947754	23457	+	BC004855 TSC_hg19_v1_chr11_+_117947792 AK308434 AK296855 AK303173 AK290361 AK304215 AF179224 AY358530 AF216312 BC011703 AK172766	23541	+	TSC_hg19_v1_chr11_-_118016149 BC035017 NM_001142349	91872	-	U00672|IL10RA|3587|interleukin 10 receptor, alpha##BC028082|IL10RA|3587|interleukin 10 receptor, alpha##DQ891031|IL10RA|3587|interleukin 10 receptor, alpha##DQ893720|IL10RA|3587|interleukin 10 receptor, alpha##AK316146|IL10RA|3587|interleukin 10 receptor, alpha##AB209626|IL10RA|3587|interleukin 10 receptor, alpha##AK291645|IL10RA|3587|interleukin 10 receptor, alpha##AK301484|IL10RA|3587|interleukin 10 receptor, alpha##NM_001558|IL10RA|3587|interleukin 10 receptor, alpha##AK301260|IL10RA|3587|interleukin 10 receptor, alpha##AK316342|IL10RA|3587|interleukin 10 receptor, alpha##AK313049|IL10RA|3587|interleukin 10 receptor, alpha##AK301492|IL10RA|3587|interleukin 10 receptor, alpha##BC018715|TMPRSS13|84000|transmembrane protease, serine 13##AK300283|TMPRSS13|84000|transmembrane protease, serine 13##AB048796|TMPRSS13|84000|transmembrane protease, serine 13##AB048797|TMPRSS13|84000|transmembrane protease, serine 13##BC114928|TMPRSS13|84000|transmembrane protease, serine 13##AY190317|TMPRSS13|84000|transmembrane protease, serine 13##AK027798|TMPRSS13|84000|transmembrane protease, serine 13##NM_001077263|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206789|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206790|TMPRSS13|84000|transmembrane protease, serine 13##NM_001244995|TMPRSS13|84000|transmembrane protease, serine 13##NM_001083947|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173551|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173552|TMPRSS4|56649|transmembrane protease, serine 4##NM_019894|TMPRSS4|56649|transmembrane protease, serine 4##AK304113|TMPRSS4|56649|transmembrane protease, serine 4##BC004855|TMPRSS4|56649|transmembrane protease, serine 4##AK308434|TMPRSS4|56649|transmembrane protease, serine 4##AK296855|TMPRSS4|56649|transmembrane protease, serine 4##AK303173|TMPRSS4|56649|transmembrane protease, serine 4##AK290361|TMPRSS4|56649|transmembrane protease, serine 4##AK304215|TMPRSS4|56649|transmembrane protease, serine 4##AF179224|TMPRSS4|56649|transmembrane protease, serine 4##AY358530|TMPRSS4|56649|transmembrane protease, serine 4##AF216312|TMPRSS4|56649|transmembrane protease, serine 4##BC011703|TMPRSS4|56649|transmembrane protease, serine 4##AK172766|TMPRSS4|56649|transmembrane protease, serine 4##BC035017|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_001142349|SCN4B|6330|sodium channel, voltage-gated, type IV, beta	0.999655	CTCF.p2:11:1.000
chr14	68038113	68038240	reg1000223.p1	19.732	+	AK307428 NM_020715 TSC_hg19_v1_chr14_+_68000028 AB033026 BC146787	-38203	+	NM_182526 TSC_hg19_v1_chr14_-_67982162 AK090706 AX746582	-56066	-	TSC_hg19_v1_chr14_-_67878872 BC001226	-159305	-	BT006804 CU678574 BC071849 BC004100 L19783 AK314108 AK293584 NM_004569	28791	-	TSC_hg19_v1_chr14_+_68086582 BC029050 NM_001172	48413	+	AY074489 BC008464 TSC_hg19_v1_chr14_+_68086636	48460	+	AK307428|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##NM_020715|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##AB033026|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##BC146787|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##NM_182526|TMEM229B|161145|transmembrane protein 229B##AK090706|TMEM229B|161145|transmembrane protein 229B##BC001226|PLEK2|26499|pleckstrin 2##BT006804|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC071849|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC004100|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##L19783|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##AK314108|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##NM_004569|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC029050|ARG2|384|arginase, type II##NM_001172|ARG2|384|arginase, type II##AY074489|ARG2|384|arginase, type II##BC008464|ARG2|384|arginase, type II	0.471198	CTCF.p2:8:0.471
chr18	56448916	56449058	reg1000206.p1	19.727	+	TSC_hg19_v1_chr18_+_56338830 AB528440 DQ892319 DQ895521	-110142	+	TSC_hg19_v1_chr18_+_56338790 AB026118	-110190	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	-110259	+	NM_018181 AF295077 BC130618 BC130620	81132	+	TSC_hg19_v1_chr18_+_56530714 AB046849	81868	+	TSC_hg19_v1_chr18_+_56531281 BC036366	82362	+	DQ892319|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##DQ895521|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AB026118|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_018181|ZNF532|55205|zinc finger protein 532##AF295077|ZNF532|55205|zinc finger protein 532##BC130618|ZNF532|55205|zinc finger protein 532##BC130620|ZNF532|55205|zinc finger protein 532##AB046849|ZNF532|55205|zinc finger protein 532##BC036366|ZNF532|55205|zinc finger protein 532	0.999824	CTCF.p2:-12:1.000
chr19	10755564	10755672	reg1000053.p1	19.719	+	TSC_hg19_v1_chr19_+_10736228 FN668568 NM_020428 AK314582 BC040556 BC042692	-19399	+	TSC_hg19_v1_chr19_+_10713140 NM_001145056 AK309801 AK027519	-42485	+	CU678450 CU678534 CU678860 BC003612 BC003387 AF020797 AK222946 AK315689 AK023863 BC005021 NM_005498	-57670	-	TSC_hg19_v1_chr19_-_10764518 BC007593 BC014670 AK075016 AK311360 AL832185 BC044911	8893	-	TSC_hg19_v1_chr19_+_10764961 NM_001137673 NM_004516 NM_012218 NM_017620 NM_153464 AB209062	9322	+	U10324 TSC_hg19_v1_chr19_+_10765048 BC048314 BC064836 AK293170 AK291205 AK294084 X98264 AK291617 BC001770	9428	+	FN668568|SLC44A2|57153|solute carrier family 44, member 2##NM_020428|SLC44A2|57153|solute carrier family 44, member 2##AK314582|SLC44A2|57153|solute carrier family 44, member 2##BC040556|SLC44A2|57153|solute carrier family 44, member 2##BC042692|SLC44A2|57153|solute carrier family 44, member 2##NM_001145056|SLC44A2|57153|solute carrier family 44, member 2##AK309801|SLC44A2|57153|solute carrier family 44, member 2##AK027519|SLC44A2|57153|solute carrier family 44, member 2##BC003612|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##BC003387|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AF020797|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK222946|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK315689|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK023863|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##BC005021|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##NM_005498|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##BC007593|LOC147727|147727|uncharacterized LOC147727##BC014670|LOC147727|147727|uncharacterized LOC147727##AK075016|LOC147727|147727|uncharacterized LOC147727##AL832185|LOC147727|147727|uncharacterized LOC147727##BC044911|LOC147727|147727|uncharacterized LOC147727##NM_001137673|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##NM_004516|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##NM_012218|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##NM_017620|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##NM_153464|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##AB209062|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##U10324|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##BC048314|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##BC064836|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##AK293170|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##AK291205|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##AK294084|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##X98264|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##AK291617|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##BC001770|ILF3|3609|interleukin enhancer binding factor 3, 90kDa	0.634813	CTCF.p2:13:0.635
chr1	17452381	17452512	reg1000189.p1	19.703	+	AB587350 AB023211 AB030176 BC009701 TSC_hg19_v1_chr1_-_17445947 AK295783 NM_007365	-6539	-	DQ403007 TSC_hg19_v1_chr1_-_17380528 AK312056 U17248 BC007840 NM_003000	-71871	-	AL354615 AY461712 TSC_hg19_v1_chr1_-_17338424 BC030267 AK290210 NM_001141973 NM_001141974 NM_022089	-114063	-	AK314644 AK026652 AK225541 NM_013358 AB033768 BC130574 BC136402 HQ258487	79219	+	AB026831 NM_016233 BC109091 BC041592 BC109092	123153	+	AF229067 AK314839 NM_012387 AB017919 AK290507 AK309637 BC025718 AB527709 CU693030	182257	+	AB023211|PADI2|11240|peptidyl arginine deiminase, type II##AB030176|PADI2|11240|peptidyl arginine deiminase, type II##BC009701|PADI2|11240|peptidyl arginine deiminase, type II##AK295783|PADI2|11240|peptidyl arginine deiminase, type II##NM_007365|PADI2|11240|peptidyl arginine deiminase, type II##DQ403007|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AK312056|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##U17248|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##BC007840|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##NM_003000|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AL354615|ATP13A2|23400|ATPase type 13A2##AY461712|ATP13A2|23400|ATPase type 13A2##BC030267|ATP13A2|23400|ATPase type 13A2##AK290210|ATP13A2|23400|ATPase type 13A2##NM_001141973|ATP13A2|23400|ATPase type 13A2##NM_001141974|ATP13A2|23400|ATPase type 13A2##NM_022089|ATP13A2|23400|ATPase type 13A2##AK314644|PADI1|29943|peptidyl arginine deiminase, type I##AK026652|PADI1|29943|peptidyl arginine deiminase, type I##AK225541|PADI1|29943|peptidyl arginine deiminase, type I##NM_013358|PADI1|29943|peptidyl arginine deiminase, type I##AB033768|PADI1|29943|peptidyl arginine deiminase, type I##BC130574|PADI1|29943|peptidyl arginine deiminase, type I##BC136402|PADI1|29943|peptidyl arginine deiminase, type I##HQ258487|PADI1|29943|peptidyl arginine deiminase, type I##AB026831|PADI3|51702|peptidyl arginine deiminase, type III##NM_016233|PADI3|51702|peptidyl arginine deiminase, type III##BC109091|PADI3|51702|peptidyl arginine deiminase, type III##BC041592|PADI3|51702|peptidyl arginine deiminase, type III##BC109092|PADI3|51702|peptidyl arginine deiminase, type III##AF229067|PADI4|23569|peptidyl arginine deiminase, type IV##AK314839|PADI4|23569|peptidyl arginine deiminase, type IV##NM_012387|PADI4|23569|peptidyl arginine deiminase, type IV##AB017919|PADI4|23569|peptidyl arginine deiminase, type IV##AK290507|PADI4|23569|peptidyl arginine deiminase, type IV##AK309637|PADI4|23569|peptidyl arginine deiminase, type IV##BC025718|PADI4|23569|peptidyl arginine deiminase, type IV	0.997743	CTCF.p2:-17:0.998
chr1	36565328	36565448	reg1000113.p1	19.691	+	NM_017825 AF212236 TSC_hg19_v1_chr1_+_36554492 AJ427295 AK000453 AK295283 BC014169 AK316349 AK223037 CR457237	-10910	+	TSC_hg19_v1_chr1_+_36549714 BC035620 AK313610	-15665	+	AF054910 NM_014466 TSC_hg19_v1_chr1_+_36549694	-15702	+	AK074129 BC096295 BC096296 BC096297 BC099645 NM_005202	461	-	AJ224335 TSC_hg19_v1_chr1_-_36615058 AY007139	49648	-	BC007662 NM_014408 AF041432 TSC_hg19_v1_chr1_-_36615078 AK315610	49702	-	NM_017825|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AF212236|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AJ427295|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK000453|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK295283|ADPRHL2|54936|ADP-ribosylhydrolase like 2##BC014169|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK316349|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK223037|ADPRHL2|54936|ADP-ribosylhydrolase like 2##CR457237|ADPRHL2|54936|ADP-ribosylhydrolase like 2##BC035620|TEKT2|27285|tektin 2 (testicular)##AK313610|TEKT2|27285|tektin 2 (testicular)##AF054910|TEKT2|27285|tektin 2 (testicular)##NM_014466|TEKT2|27285|tektin 2 (testicular)##AK074129|COL8A2|1296|collagen, type VIII, alpha 2##BC096295|COL8A2|1296|collagen, type VIII, alpha 2##BC096296|COL8A2|1296|collagen, type VIII, alpha 2##BC096297|COL8A2|1296|collagen, type VIII, alpha 2##BC099645|COL8A2|1296|collagen, type VIII, alpha 2##NM_005202|COL8A2|1296|collagen, type VIII, alpha 2##AJ224335|TRAPPC3|27095|trafficking protein particle complex 3##AY007139|TRAPPC3|27095|trafficking protein particle complex 3##BC007662|TRAPPC3|27095|trafficking protein particle complex 3##NM_014408|TRAPPC3|27095|trafficking protein particle complex 3##AF041432|TRAPPC3|27095|trafficking protein particle complex 3##AK315610|TRAPPC3|27095|trafficking protein particle complex 3	0.999966	CTCF.p2:-6:1.000
chr1	9927653	9927778	reg1000250.p1	19.674	+	AF438482 NM_001009566 NM_014944 AB020718	-43149	-	TSC_hg19_v1_chr1_-_9884024 BC033902	-43671	-	TSC_hg19_v1_chr1_-_9884023 AK304813	-43694	-	TSC_hg19_v1_chr1_-_9970314 AB021262 BC035794 BC014300 NM_001012329 NM_020248	42594	-	BC063443 NM_032368	75110	-	TSC_hg19_v1_chr1_-_10003358 AB060688 BC007240 AK304348 AK312550	75658	-	AF438482|CLSTN1|22883|calsyntenin 1##NM_001009566|CLSTN1|22883|calsyntenin 1##NM_014944|CLSTN1|22883|calsyntenin 1##AB020718|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1##AB021262|CTNNBIP1|56998|catenin, beta interacting protein 1##BC014300|CTNNBIP1|56998|catenin, beta interacting protein 1##NM_001012329|CTNNBIP1|56998|catenin, beta interacting protein 1##NM_020248|CTNNBIP1|56998|catenin, beta interacting protein 1##BC063443|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##NM_032368|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AB060688|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##BC007240|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK304348|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK312550|LZIC|84328|leucine zipper and CTNNBIP1 domain containing	0.998519	CTCF.p2:1:0.999
chr11	2326693	2326808	reg1000222.p1	19.668	+	TSC_hg19_v1_chr11_+_2323366 AY039001 AK310116 CU677677 AK298692	-3364	+	TSC_hg19_v1_chr11_+_2323260 AK128812 AK307638 BC016693 NM_139022	-3499	+	TSC_hg19_v1_chr11_-_2323122 AK290921 BC028070 AK310172 NM_001142946 AB029488	-3573	-	TSC_hg19_v1_chr11_+_2398543 NM_004356 BC093047 M33680	71797	+	TSC_hg19_v1_chr11_+_2421990 BC006091	95246	+	AF125568 NM_005706	96772	+	AY039001|TSPAN32|10077|tetraspanin 32##AK310116|TSPAN32|10077|tetraspanin 32##AK298692|TSPAN32|10077|tetraspanin 32##AK128812|TSPAN32|10077|tetraspanin 32##AK307638|TSPAN32|10077|tetraspanin 32##BC016693|TSPAN32|10077|tetraspanin 32##NM_139022|TSPAN32|10077|tetraspanin 32##AK290921|C11orf21|29125|chromosome 11 open reading frame 21##BC028070|C11orf21|29125|chromosome 11 open reading frame 21##AK310172|C11orf21|29125|chromosome 11 open reading frame 21##NM_001142946|C11orf21|29125|chromosome 11 open reading frame 21##AB029488|C11orf21|29125|chromosome 11 open reading frame 21##NM_004356|CD81|975|CD81 molecule##BC093047|CD81|975|CD81 molecule##M33680|CD81|975|CD81 molecule##BC006091|TSSC4|10078|tumor suppressing subtransferable candidate 4##AF125568|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_005706|TSSC4|10078|tumor suppressing subtransferable candidate 4	0.996706	CTCF.p2:-8:0.997
chr17	74117614	74117774	reg1000248.p1	19.658	+	TSC_hg19_v1_chr17_-_74099869 BX647763 NM_001013839 NM_001145297 NM_001145298 NM_001145299 NM_015219	-17829	-	AK295871 TSC_hg19_v1_chr17_-_74099825 FJ457119 FJ457120 AK023832 BC018466 AB028990 BC011045 AK128278 BC029432 AK022397 AL834324	-17970	-	AK122638 NM_180990 AF512521 BC110596 BC110597 AB223030	-42389	+	BC046460 NM_001454	19680	-	AK091467 AX747002 AB067504 NM_052916 TSC_hg19_v1_chr17_-_74236615	118754	-	TSC_hg19_v1_chr17_+_74261282 BC060859 NM_182565	143590	+	BX647763|EXOC7|23265|exocyst complex component 7##NM_001013839|EXOC7|23265|exocyst complex component 7##NM_001145297|EXOC7|23265|exocyst complex component 7##NM_001145298|EXOC7|23265|exocyst complex component 7##NM_001145299|EXOC7|23265|exocyst complex component 7##NM_015219|EXOC7|23265|exocyst complex component 7##AK295871|EXOC7|23265|exocyst complex component 7##FJ457119|EXOC7|23265|exocyst complex component 7##FJ457120|EXOC7|23265|exocyst complex component 7##AK023832|EXOC7|23265|exocyst complex component 7##BC018466|EXOC7|23265|exocyst complex component 7##AB028990|EXOC7|23265|exocyst complex component 7##BC011045|EXOC7|23265|exocyst complex component 7##AK128278|EXOC7|23265|exocyst complex component 7##BC029432|EXOC7|23265|exocyst complex component 7##AK022397|EXOC7|23265|exocyst complex component 7##AL834324|EXOC7|23265|exocyst complex component 7##AK122638|ZACN|353174|zinc activated ligand-gated ion channel##NM_180990|ZACN|353174|zinc activated ligand-gated ion channel##AF512521|ZACN|353174|zinc activated ligand-gated ion channel##BC110596|ZACN|353174|zinc activated ligand-gated ion channel##BC110597|ZACN|353174|zinc activated ligand-gated ion channel##AB223030|ZACN|353174|zinc activated ligand-gated ion channel##BC046460|FOXJ1|2302|forkhead box J1##NM_001454|FOXJ1|2302|forkhead box J1##AK091467|RNF157|114804|ring finger protein 157##AB067504|RNF157|114804|ring finger protein 157##NM_052916|RNF157|114804|ring finger protein 157##BC060859|FAM100B|283991|family with sequence similarity 100, member B##NM_182565|FAM100B|283991|family with sequence similarity 100, member B	0.852692	CTCF.p2:-10:0.853
chr15	42281850	42281973	reg1000212.p1	19.647	+	AK074621 AK292634 TSC_hg19_v1_chr15_-_42264753 AK024902 NM_139265	-17158	-	TSC_hg19_v1_chr15_-_42264741 CU690850 DQ892745 DQ895991 BC077716 AF454953 BC006287 AF307137 AF323924 BC051823	-17195	-	AF233523 NM_016642	-95637	-	NM_001206670	60989	-	AB527201 AB090876 NM_178034	104793	-	BC111481 BC035335 AK122623 BC142682 BC146648 BC131531 AK304368 AK172836 NM_213600	166892	-	AK074621|EHD4|30844|EH-domain containing 4##AK292634|EHD4|30844|EH-domain containing 4##AK024902|EHD4|30844|EH-domain containing 4##NM_139265|EHD4|30844|EH-domain containing 4##DQ892745|EHD4|30844|EH-domain containing 4##DQ895991|EHD4|30844|EH-domain containing 4##BC077716|EHD4|30844|EH-domain containing 4##AF454953|EHD4|30844|EH-domain containing 4##BC006287|EHD4|30844|EH-domain containing 4##AF307137|EHD4|30844|EH-domain containing 4##AF323924|EHD4|30844|EH-domain containing 4##BC051823|EHD4|30844|EH-domain containing 4##AF233523|SPTBN5|51332|spectrin, beta, non-erythrocytic 5##NM_016642|SPTBN5|51332|spectrin, beta, non-erythrocytic 5##NM_001206670|PLA2G4E|123745|phospholipase A2, group IVE##AB090876|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##NM_178034|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##BC111481|PLA2G4F|255189|phospholipase A2, group IVF##BC035335|PLA2G4F|255189|phospholipase A2, group IVF##AK122623|PLA2G4F|255189|phospholipase A2, group IVF##BC142682|PLA2G4F|255189|phospholipase A2, group IVF##BC146648|PLA2G4F|255189|phospholipase A2, group IVF##BC131531|PLA2G4F|255189|phospholipase A2, group IVF##AK304368|PLA2G4F|255189|phospholipase A2, group IVF##AK172836|PLA2G4F|255189|phospholipase A2, group IVF##NM_213600|PLA2G4F|255189|phospholipase A2, group IVF	0.358211	CTCF.p2:-18:0.358
chr11	2440993	2441108	reg1000211.p1	19.637	+	AF125568 NM_005706	-17528	+	TSC_hg19_v1_chr11_+_2421990 BC006091	-19054	+	TSC_hg19_v1_chr11_+_2398543 NM_004356 BC093047 M33680	-42503	+	AJ270996 BC093787 BC093789 BC143351 BC143353 AF177473 NM_014555	3207	-	TSC_hg19_v1_chr11_+_2466237 AF000571 NM_000218 EF010934 AB464057 AY114213 U86146	25199	+	BC007733 TSC_hg19_v1_chr11_-_2560881	119797	-	AF125568|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_005706|TSSC4|10078|tumor suppressing subtransferable candidate 4##BC006091|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_004356|CD81|975|CD81 molecule##BC093047|CD81|975|CD81 molecule##M33680|CD81|975|CD81 molecule##AJ270996|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093787|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093789|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143351|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143353|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF177473|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##NM_014555|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF000571|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##NM_000218|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##EF010934|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AY114213|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##U86146|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1	0.997564	CTCF.p2:11:0.998
chr16	19097923	19098065	reg1000231.p1	19.635	+	TSC_hg19_v1_chr16_+_19079232 AL136647 NM_001190983 BC043272	-18729	+	AF098948 TSC_hg19_v1_chr16_+_19078967 AK225115 AB528110 AM393051 AM393521	-19022	+	AK315470 NM_016138 TSC_hg19_v1_chr16_+_19078935 BC003185 AK024291	-19064	+	TSC_hg19_v1_chr16_+_19125253 AK096327 NM_001034841	27254	+	TSC_hg19_v1_chr16_+_19179561 NM_016524 BC004518 AF220560 AB527504 CU678742	81757	+	BC070101 NM_001105248 NM_001105249	324062	+	AL136647|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_001190983|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC043272|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AF098948|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK225115|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AM393051|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AM393521|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK315470|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_016138|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC003185|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK024291|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK096327|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##NM_001034841|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##NM_016524|SYT17|51760|synaptotagmin XVII##BC004518|SYT17|51760|synaptotagmin XVII##AF220560|SYT17|51760|synaptotagmin XVII##BC070101|TMC5|79838|transmembrane channel-like 5##NM_001105248|TMC5|79838|transmembrane channel-like 5##NM_001105249|TMC5|79838|transmembrane channel-like 5	0.993942	CTCF.p2:-20:0.994
chr1	205225399	205225525	reg1000237.p1	19.631	+	AK293734 NM_001242925	-27404	+	TSC_hg19_v1_chr1_+_205197073 AB007950 NM_014858 AK131419	-28379	+	TSC_hg19_v1_chr1_-_205180700 AY429674 BC060870 NM_015375 NM_199462	-44743	-	AY358192 TSC_hg19_v1_chr1_+_205236667	11172	+	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	65381	-	BC036076 TSC_hg19_v1_chr1_-_205313311	87848	-	AK293734|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_001242925|TMCC2|9911|transmembrane and coiled-coil domain family 2##AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2##AY429674|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC060870|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_015375|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_199462|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2##AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC036076|KLHDC8A|55220|kelch domain containing 8A	0.953581	CTCF.p2:16:0.935
chr1	205626793	205626915	reg1000146.p1	19.618	+	NM_001973 NM_021795	-24855	-	BC063676 M85164 M85165 TSC_hg19_v1_chr1_-_205601025 BC040145	-25948	-	BC036549 AK091896 AX747240 TSC_hg19_v1_chr1_+_205538184 AK304120 AK090831 AX746641 AK295148	-88641	+	BC050416 AY033593 TSC_hg19_v1_chr1_-_205649588	22714	-	AK313479 TSC_hg19_v1_chr1_-_205649636 AK290364 FJ805258 FJ805259 FJ805260 FJ805261 NM_033102 EF632109	22827	-	TSC_hg19_v1_chr1_-_205719084 CR457339 AB528490 DQ891218 DQ894401	92235	-	NM_001973|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##NM_021795|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC063676|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85164|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85165|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC040145|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC036549|MFSD4|148808|major facilitator superfamily domain containing 4##AK091896|MFSD4|148808|major facilitator superfamily domain containing 4##AK304120|MFSD4|148808|major facilitator superfamily domain containing 4##AK090831|MFSD4|148808|major facilitator superfamily domain containing 4##AK295148|MFSD4|148808|major facilitator superfamily domain containing 4##BC050416|SLC45A3|85414|solute carrier family 45, member 3##AY033593|SLC45A3|85414|solute carrier family 45, member 3##AK313479|SLC45A3|85414|solute carrier family 45, member 3##AK290364|SLC45A3|85414|solute carrier family 45, member 3##NM_033102|SLC45A3|85414|solute carrier family 45, member 3##CR457339|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1##DQ891218|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1##DQ894401|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	0.989555	CTCF.p2:8:0.990
chr10	94194890	94194999	reg1000110.p2	19.617	+	TSC_hg19_v1_chr10_+_94050959 AK000452 AK309175 NM_017824 AK294799 BC015480 AB191202 AB529108	-143890	+	TSC_hg19_v1_chr10_-_94050827 BC036444 AK302576 NM_014912	-144108	-	AB023157 NM_001178137 TSC_hg19_v1_chr10_-_94003035	-191925	-	AK302578 AK093287 AK316407 AX748033 NM_001165946	62549	-	TSC_hg19_v1_chr10_-_94333800 AB527891 AK312810 BC096336 BC096337 BC096338 BC096339 BC036188	138830	-	TSC_hg19_v1_chr10_-_94333845 M21188	138893	-	AK000452|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK309175|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##NM_017824|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK294799|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##BC015480|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AB191202|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##BC036444|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK302576|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_014912|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK302578|IDE|3416|insulin-degrading enzyme##AK093287|IDE|3416|insulin-degrading enzyme##AK316407|IDE|3416|insulin-degrading enzyme##NM_001165946|IDE|3416|insulin-degrading enzyme##AK312810|IDE|3416|insulin-degrading enzyme##BC096336|IDE|3416|insulin-degrading enzyme##BC096337|IDE|3416|insulin-degrading enzyme##BC096338|IDE|3416|insulin-degrading enzyme##BC096339|IDE|3416|insulin-degrading enzyme##BC036188|IDE|3416|insulin-degrading enzyme##M21188|IDE|3416|insulin-degrading enzyme	0.930404	CTCF.p2:10:0.930
chr7	128731659	128731810	reg1000230.p1	19.593	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-36529	-	TSC_hg19_v1_chr7_-_128695168 BC009923	-36586	-	AJ133769 AF145029 TSC_hg19_v1_chr7_-_128694965 AK312580 BC068530	-36839	-	BC009989 NM_005631	96978	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	133095	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	276252	+	AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3##AJ133769|TNPO3|23534|transportin 3##AF145029|TNPO3|23534|transportin 3##AK312580|TNPO3|23534|transportin 3##BC068530|TNPO3|23534|transportin 3##BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2	0.924626	CTCF.p2:1:0.925
chr10	103989638	103989777	reg1000198.p1	19.588	+	BC034344 NM_152310	-3565	+	NM_004741 TSC_hg19_v1_chr10_+_103912145 Z34289 AK225101 AK314363 AK056755 BC001883 BC006769 DQ891862 DQ895051 AY820769 D21262	-77656	+	AF325193 NM_015062 TSC_hg19_v1_chr10_+_103892796 AK299885 BC063806 AB011167 BC063829 AK095248 AB384505	-96902	+	BC011642 NM_005029	11522	-	NM_001199378 NM_001199379 NM_004193 BC057804 BC068543 TSC_hg19_v1_chr10_+_104005288 BC094763 AK025330 BC032543	15572	+	TSC_hg19_v1_chr10_+_104005308 AF068755 D87435 BC117681 BC117682	15660	+	BC034344|ELOVL3|83401|ELOVL fatty acid elongase 3##NM_152310|ELOVL3|83401|ELOVL fatty acid elongase 3##NM_004741|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##Z34289|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK225101|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK314363|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK056755|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC001883|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC006769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##DQ891862|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##DQ895051|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AY820769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##D21262|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AF325193|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##NM_015062|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AK299885|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC063806|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AB011167|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC063829|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AK095248|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC011642|PITX3|5309|paired-like homeodomain 3##NM_005029|PITX3|5309|paired-like homeodomain 3##NM_001199378|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199379|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	0.977375	CTCF.p2:-12:0.977
chr11	1853790	1853933	reg1000351.p1	19.576	+	TSC_hg19_v1_chr11_-_1785210 NM_001909	-68626	-	TSC_hg19_v1_chr11_-_1785158 BC016320 M11233	-68704	-	AK130178 TSC_hg19_v1_chr11_-_1785104	-68757	-	NM_138567 AK075202 BC144657 BC144659 BC144660 BC144661	1856	+	NM_003282	6371	+	BC032148 NM_001145829	6857	+	NM_001909|CTSD|1509|cathepsin D##BC016320|CTSD|1509|cathepsin D##M11233|CTSD|1509|cathepsin D##AK130178|CTSD|1509|cathepsin D##NM_138567|SYT8|90019|synaptotagmin VIII##AK075202|SYT8|90019|synaptotagmin VIII##BC144657|SYT8|90019|synaptotagmin VIII##BC144659|SYT8|90019|synaptotagmin VIII##BC144660|SYT8|90019|synaptotagmin VIII##BC144661|SYT8|90019|synaptotagmin VIII##NM_003282|TNNI2|7136|troponin I type 2 (skeletal, fast)##BC032148|TNNI2|7136|troponin I type 2 (skeletal, fast)##NM_001145829|TNNI2|7136|troponin I type 2 (skeletal, fast)	0.999914	CTCF.p2:-7:1.000
chr21	47240590	47240704	reg1000145.p1	19.574	+	TSC_hg19_v1_chr21_+_47063638 AK310131	-177018	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-278315	-	AK303168 NM_001205207	-286113	-	AF176329 NM_001130141 NM_020528 BC012061 AK310672	29241	+	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	161038	+	TSC_hg19_v1_chr21_+_47518062 NM_001849 NM_058174 NM_058175 BC065509	277403	+	AK310131|PCBP3|54039|poly(rC) binding protein 3##U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1##NM_001849|COL6A2|1292|collagen, type VI, alpha 2##NM_058174|COL6A2|1292|collagen, type VI, alpha 2##NM_058175|COL6A2|1292|collagen, type VI, alpha 2##BC065509|COL6A2|1292|collagen, type VI, alpha 2	0.996211	CTCF.p2:16:0.996
chr3	52178410	52178533	reg1000213.p1	19.567	+	X93921 TSC_hg19_v1_chr3_-_52090192 BC019107 AF508727 BC104880 BC104882 NM_001947	-88196	-	BC008926 NM_000992 TSC_hg19_v1_chr3_-_52029968	-148508	-	TSC_hg19_v1_chr3_-_52029912 BC070190 AK289538 AK311884 D28412	-148558	-	TSC_hg19_v1_chr3_-_52188413 BC119692 AK075289 BC119693 AK315688	9959	-	BC110877 NM_001161580 NM_001161581 NM_015426	10234	-	TSC_hg19_v1_chr3_+_52232145 NM_199166 AK312566 NM_000688 AK300993 AB063322 AY260745	53646	+	X93921|DUSP7|1849|dual specificity phosphatase 7##BC019107|DUSP7|1849|dual specificity phosphatase 7##AF508727|DUSP7|1849|dual specificity phosphatase 7##BC104880|DUSP7|1849|dual specificity phosphatase 7##BC104882|DUSP7|1849|dual specificity phosphatase 7##NM_001947|DUSP7|1849|dual specificity phosphatase 7##BC008926|RPL29|6159|ribosomal protein L29##NM_000992|RPL29|6159|ribosomal protein L29##BC070190|RPL29|6159|ribosomal protein L29##AK289538|RPL29|6159|ribosomal protein L29##AK311884|RPL29|6159|ribosomal protein L29##D28412|RPL29|6159|ribosomal protein L29##BC119692|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK075289|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC119693|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK315688|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC110877|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161580|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161581|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_015426|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_199166|ALAS1|211|aminolevulinate, delta-, synthase 1##AK312566|ALAS1|211|aminolevulinate, delta-, synthase 1##NM_000688|ALAS1|211|aminolevulinate, delta-, synthase 1##AK300993|ALAS1|211|aminolevulinate, delta-, synthase 1##AB063322|ALAS1|211|aminolevulinate, delta-, synthase 1##AY260745|ALAS1|211|aminolevulinate, delta-, synthase 1	0.991135	CTCF.p2:10:0.953
chr11	61103803	61103929	reg1000195.p1	19.556	+	TSC_hg19_v1_chr11_+_61102041 BC001341	-1774	+	NM_015533 TSC_hg19_v1_chr11_+_61100711 AK023915 AK223580 AK308553	-3165	+	TSC_hg19_v1_chr11_-_61100667 AK299650 AL831958 NM_001923	-3201	-	AK225754 AK310167 NM_001161452	20425	-	BC047710 TSC_hg19_v1_chr11_-_61129315 AK297063 AK310976	25432	-	TSC_hg19_v1_chr11_-_61129355 AK075559	25490	-	BC001341|DAK|26007|dihydroxyacetone kinase 2 homolog (S. cerevisiae)##NM_015533|DAK|26007|dihydroxyacetone kinase 2 homolog (S. cerevisiae)##AK023915|DAK|26007|dihydroxyacetone kinase 2 homolog (S. cerevisiae)##AK223580|DAK|26007|dihydroxyacetone kinase 2 homolog (S. cerevisiae)##AK308553|DAK|26007|dihydroxyacetone kinase 2 homolog (S. cerevisiae)##AK299650|DDB1|1642|damage-specific DNA binding protein 1, 127kDa##AL831958|DDB1|1642|damage-specific DNA binding protein 1, 127kDa##NM_001923|DDB1|1642|damage-specific DNA binding protein 1, 127kDa##AK225754|CYBASC3|220002|cytochrome b, ascorbate dependent 3##AK310167|CYBASC3|220002|cytochrome b, ascorbate dependent 3##NM_001161452|CYBASC3|220002|cytochrome b, ascorbate dependent 3##BC047710|CYBASC3|220002|cytochrome b, ascorbate dependent 3##AK297063|CYBASC3|220002|cytochrome b, ascorbate dependent 3##AK310976|CYBASC3|220002|cytochrome b, ascorbate dependent 3##AK075559|CYBASC3|220002|cytochrome b, ascorbate dependent 3	0.999436	CTCF.p2:-3:0.999
chr10	115559479	115559613	reg1000273.p1	19.553	+	BC037870 FJ236306 NM_182601	-34969	+	AK128811 NM_001193434 NM_001193435 NM_024889	-48334	+	TSC_hg19_v1_chr10_+_115439635 AK301437 AK223489 BC015799 AK300578 U40281 U37448 U67320	-119881	+	D42045 NM_014881 AK307187	54370	-	TSC_hg19_v1_chr10_+_115614419 NM_198514 AK090631 AX746547	54873	+	NM_000684 J03019	244263	+	BC037870|C10orf81|79949|chromosome 10 open reading frame 81##FJ236306|C10orf81|79949|chromosome 10 open reading frame 81##NM_182601|C10orf81|79949|chromosome 10 open reading frame 81##AK128811|C10orf81|79949|chromosome 10 open reading frame 81##NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81##NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81##NM_024889|C10orf81|79949|chromosome 10 open reading frame 81##AK301437|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##AK223489|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##BC015799|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##AK300578|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U40281|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U37448|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U67320|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A##NM_198514|NHLRC2|374354|NHL repeat containing 2##AK090631|NHLRC2|374354|NHL repeat containing 2##NM_000684|ADRB1|153|adrenergic, beta-1-, receptor##J03019|ADRB1|153|adrenergic, beta-1-, receptor	0.998634	CTCF.p2:-5:0.999
chr8	94834666	94834802	reg1000264.p1	19.553	+	AK308071 NM_001142301 NM_153704 AK092244 AX747428 TSC_hg19_v1_chr8_+_94767121 AK308735 BX648768 BC031220 BC017974 BC054338 AK094935 BC032835	-67620	+	TSC_hg19_v1_chr8_-_94753214 NM_203390	-81507	-	BC039260 TSC_hg19_v1_chr8_-_94753192	-81543	-	NM_018444 TSC_hg19_v1_chr8_+_94929171 BC047619 NM_001161780 AK057079 NM_001161779 BC064978 AF155661 NM_001161781	94446	+	NM_001161778 AB590483 TSC_hg19_v1_chr8_+_94930074 AK302651	95301	+	U07969 BC112013 BC113464 TSC_hg19_v1_chr8_-_95220784 X83228 AK301001 NM_004063	386060	-	AK308071|TMEM67|91147|transmembrane protein 67##NM_001142301|TMEM67|91147|transmembrane protein 67##NM_153704|TMEM67|91147|transmembrane protein 67##AK092244|TMEM67|91147|transmembrane protein 67##AK308735|TMEM67|91147|transmembrane protein 67##BX648768|TMEM67|91147|transmembrane protein 67##BC031220|TMEM67|91147|transmembrane protein 67##BC017974|TMEM67|91147|transmembrane protein 67##BC054338|TMEM67|91147|transmembrane protein 67##AK094935|TMEM67|91147|transmembrane protein 67##BC032835|TMEM67|91147|transmembrane protein 67##NM_203390|RBM12B|389677|RNA binding motif protein 12B##BC039260|RBM12B|389677|RNA binding motif protein 12B##NM_018444|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC047619|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161780|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK057079|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161779|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC064978|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AF155661|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161781|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161778|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK302651|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)	0.993244	CTCF.p2:-9:0.993
chr12	1762105	1762219	reg1000207.p1	19.544	+	BC001749 NM_032642	-23751	+	AY009399 NM_030775	-35941	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	-58811	-	AK127196 TSC_hg19_v1_chr12_+_1800187	38004	+	TSC_hg19_v1_chr12_+_1800235 AK128511 AK127111 BC051858 NM_024551	38055	+	BC048288 TSC_hg19_v1_chr12_-_1920907 AK301234	158762	-	BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AK127196|ADIPOR2|79602|adiponectin receptor 2##AK128511|ADIPOR2|79602|adiponectin receptor 2##BC051858|ADIPOR2|79602|adiponectin receptor 2##NM_024551|ADIPOR2|79602|adiponectin receptor 2##BC048288|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##AK301234|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4	0.0	
chr1	41882877	41882997	reg1000232.p1	19.543	+	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-175101	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-175152	-	BC021252 NM_001172221	-254249	-	BC034393 X55177 M65199 NM_001956	67382	-	TSC_hg19_v1_chr1_-_42384357 BC040942	501405	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	501436	-	BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC021252|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172221|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.99963	CTCF.p2:2:1.000
chr9	37913732	37913883	reg1000187.p1	19.531	+	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	-9441	-	AK091407 AX746962 TSC_hg19_v1_chr9_-_37904125 BC008500 BC063563	-9678	-	TSC_hg19_v1_chr9_+_37800815 BC108686	-112999	+	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	155334	-	X75342 NM_003028 TSC_hg19_v1_chr9_-_38069225 BC094765	155434	-	TSC_hg19_v1_chr9_+_38392669 NM_000692	478866	+	AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##AK091407|MCART1|92014|mitochondrial carrier triple repeat 1##BC008500|MCART1|92014|mitochondrial carrier triple repeat 1##BC063563|MCART1|92014|mitochondrial carrier triple repeat 1##BC108686|DCAF10|79269|DDB1 and CUL4 associated factor 10##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B##X75342|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_003028|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1	0.641348	CTCF.p2:-30:0.231	CTCF.p2:86:0.410
chr17	48919337	48919455	reg1000104.p1	19.524	+	NM_175575	-6792	+	AF147357 TSC_hg19_v1_chr17_+_48821111	-98286	+	TSC_hg19_v1_chr17_+_48796963 NM_006107 NM_016424 AK290540 AK225980 AK023672 BC047043 BC056409 BC002925 AK295983 DQ013876 AK001925	-122403	+	TSC_hg19_v1_chr17_-_48943716 BC070493 BC098415 NM_001243885 NM_005749	24300	-	AK313904 NM_001243877	25942	-	TSC_hg19_v1_chr17_-_49124138 BC007524 BC059946 AK299553 AK307793 AK295098 AK309214 AK024068 NM_001251971	204832	-	NM_175575|WFIKKN2|124857|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2##AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_006107|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_016424|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK290540|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK225980|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK023672|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC047043|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC056409|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC002925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK295983|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##DQ013876|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK001925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC070493|TOB1|10140|transducer of ERBB2, 1##BC098415|TOB1|10140|transducer of ERBB2, 1##NM_001243885|TOB1|10140|transducer of ERBB2, 1##NM_005749|TOB1|10140|transducer of ERBB2, 1##AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1##BC007524|SPAG9|9043|sperm associated antigen 9##BC059946|SPAG9|9043|sperm associated antigen 9##AK299553|SPAG9|9043|sperm associated antigen 9##AK307793|SPAG9|9043|sperm associated antigen 9##AK295098|SPAG9|9043|sperm associated antigen 9##AK309214|SPAG9|9043|sperm associated antigen 9##AK024068|SPAG9|9043|sperm associated antigen 9##NM_001251971|SPAG9|9043|sperm associated antigen 9	0.97068	CTCF.p2:13:0.971
chr6	37659901	37660026	reg1000128.p2	19.512	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-192267	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-192311	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-256526	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	5743	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	127327	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	127727	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.986503	CTCF.p2:4:0.987
chr3	148991016	148991157	reg1000229.p1	19.496	+	BC070304 NM_000096	-51279	-	AY033141 NM_032383 TSC_hg19_v1_chr3_+_148847453 AK291631 AK055245 BC040359 AK298478 CU691866 DQ891178 DQ894360	-143646	+	AB209052 EU446704 TSC_hg19_v1_chr3_-_148804298 AK291231 L34673 BC015498 BC005260 BC044659 BC014326 BC030976 NM_003071 NM_139048	-186824	-	NM_001184723 AK313400 BC014339 AL833134 NM_138786	60316	-	TSC_hg19_v1_chr3_-_149086887 X75684	95833	-	CR456953 CU679647 BC010166 TSC_hg19_v1_chr3_-_149095398	104280	-	BC070304|CP|1356|ceruloplasmin (ferroxidase)##NM_000096|CP|1356|ceruloplasmin (ferroxidase)##AY033141|HPS3|84343|Hermansky-Pudlak syndrome 3##NM_032383|HPS3|84343|Hermansky-Pudlak syndrome 3##AK291631|HPS3|84343|Hermansky-Pudlak syndrome 3##AK055245|HPS3|84343|Hermansky-Pudlak syndrome 3##BC040359|HPS3|84343|Hermansky-Pudlak syndrome 3##AK298478|HPS3|84343|Hermansky-Pudlak syndrome 3##DQ891178|HPS3|84343|Hermansky-Pudlak syndrome 3##DQ894360|HPS3|84343|Hermansky-Pudlak syndrome 3##AB209052|HLTF|6596|helicase-like transcription factor##EU446704|HLTF|6596|helicase-like transcription factor##AK291231|HLTF|6596|helicase-like transcription factor##L34673|HLTF|6596|helicase-like transcription factor##BC015498|HLTF|6596|helicase-like transcription factor##BC005260|HLTF|6596|helicase-like transcription factor##BC044659|HLTF|6596|helicase-like transcription factor##BC014326|HLTF|6596|helicase-like transcription factor##BC030976|HLTF|6596|helicase-like transcription factor##NM_003071|HLTF|6596|helicase-like transcription factor##NM_139048|HLTF|6596|helicase-like transcription factor##NM_001184723|TM4SF18|116441|transmembrane 4 L six family member 18##AK313400|TM4SF18|116441|transmembrane 4 L six family member 18##BC014339|TM4SF18|116441|transmembrane 4 L six family member 18##AL833134|TM4SF18|116441|transmembrane 4 L six family member 18##NM_138786|TM4SF18|116441|transmembrane 4 L six family member 18##X75684|TM4SF1|4071|transmembrane 4 L six family member 1##CR456953|TM4SF1|4071|transmembrane 4 L six family member 1##BC010166|TM4SF1|4071|transmembrane 4 L six family member 1	1.443839	CTCF.p2:-18:0.943	CTCF.p2:36:0.501
chr17	20224214	20224339	reg1000107.p1	19.490	+	BC033618 TSC_hg19_v1_chr17_+_20108434 AK298601	-115842	+	TSC_hg19_v1_chr17_+_20059384 NM_001033554 NM_001033555 NM_001243438 AK301318 AK304186 AY816326 AY816327 BC021123 BC050058	-164942	+	AY816328 AY816329 NM_001033553 NM_152904 AB041533	-233942	+	TSC_hg19_v1_chr17_+_20224469 BC036241	190	+	BC105943 AK290263 NM_001042685 AK296659	146559	-	NM_001190790	258760	+	BC033618|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK298601|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033554|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033555|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001243438|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK301318|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK304186|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816326|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816327|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC021123|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC050058|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816328|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816329|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033553|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_152904|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AB041533|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC036241|CCDC144C|348254|coiled-coil domain containing 144C##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK290263|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001042685|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2	1.99759	CTCF.p2:22:0.999	CTCF.p2:-25:0.999
chr7	5125182	5125303	reg1000139.p2	19.489	+	AK293069 NM_001204456 NM_001204513 TSC_hg19_v1_chr7_+_5085490 AF226869 NM_021163	-39741	+	TSC_hg19_v1_chr7_+_5013663 BC068459 AK309798 AK308526 AK311517 BX538059 AK303831 BC026736	-111556	+	AY424288 BC037881 BC048346 TSC_hg19_v1_chr7_-_4998841 AK094524 BC067905 NM_001100600 NM_198403	-126443	-	TSC_hg19_v1_chr7_+_5229863 AL080155 NM_001033518 NM_001033519 NM_015610 NM_016003 AK024279 BC007596 AK023041	104587	+	TSC_hg19_v1_chr7_+_5229890 AK315468 BC004116 BC021200	104655	+	TSC_hg19_v1_chr7_+_5229917 BC021012 BC021068	104673	+	AK293069|RBAK|57786|RB-associated KRAB zinc finger##NM_001204456|RBAK|57786|RB-associated KRAB zinc finger##NM_001204513|RBAK-LOC389458|100533952|RBAK-LOC389458 readthrough##NM_021163|RBAK|57786|RB-associated KRAB zinc finger##BC068459|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK309798|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK308526|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK311517|RNF216P1|441191|ring finger protein 216 pseudogene 1##BX538059|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK303831|RNF216P1|441191|ring finger protein 216 pseudogene 1##BC026736|RNF216P1|441191|ring finger protein 216 pseudogene 1##AY424288|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC037881|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC048346|MMD2|221938|monocyte to macrophage differentiation-associated 2##AK094524|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC067905|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_001100600|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_198403|MMD2|221938|monocyte to macrophage differentiation-associated 2##AL080155|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033518|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033519|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_015610|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_016003|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK024279|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC007596|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK023041|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK315468|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC004116|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021200|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021012|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021068|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	0.998614	CTCF.p2:7:0.999
chr1	206757114	206757249	reg1000295.p1	19.488	+	TSC_hg19_v1_chr1_+_206730897 CU692112 EU831661	-26284	+	AL832784 AY261332 AK292039 TSC_hg19_v1_chr1_+_206730613	-26573	+	TSC_hg19_v1_chr1_+_206730542 BC042651 AY216268	-26661	+	DQ891590 DQ894784 TSC_hg19_v1_chr1_-_206785812 BC039134 BC058905 AK225259 BC001585 AF220417 AF262403 AK294536 AK001852	28574	-	TSC_hg19_v1_chr1_-_206785905 NM_001201478 NM_006893	28702	-	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	51663	+	EU831661|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AL832784|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY261332|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AK292039|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC042651|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY216268|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##DQ891590|EIF2D|1939|eukaryotic translation initiation factor 2D##DQ894784|EIF2D|1939|eukaryotic translation initiation factor 2D##BC039134|EIF2D|1939|eukaryotic translation initiation factor 2D##BC058905|EIF2D|1939|eukaryotic translation initiation factor 2D##AK225259|EIF2D|1939|eukaryotic translation initiation factor 2D##BC001585|EIF2D|1939|eukaryotic translation initiation factor 2D##AF220417|EIF2D|1939|eukaryotic translation initiation factor 2D##AF262403|EIF2D|1939|eukaryotic translation initiation factor 2D##AK294536|EIF2D|1939|eukaryotic translation initiation factor 2D##AK001852|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_001201478|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_006893|EIF2D|1939|eukaryotic translation initiation factor 2D##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3	0.999351	CTCF.p2:8:0.999
chr16	23193808	23193924	reg1000122.p2	19.487	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	-33317	-	AB209794 AF105374 AF105375 NM_006043 BC093734 BC093736	-368015	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	-368364	+	U48936 BC059391 NM_001039 TSC_hg19_v1_chr16_+_23194066	186	+	NM_000336 BC036352 X87159 AK313192	119761	+	TSC_hg19_v1_chr16_-_23464487 BC000549 BC037563 NM_153603	270629	-	AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31##AB209794|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105374|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105375|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_006043|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093734|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093736|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##U48936|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##BC059391|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_001039|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_000336|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC036352|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##X87159|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##AK313192|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC000549|COG7|91949|component of oligomeric golgi complex 7##BC037563|COG7|91949|component of oligomeric golgi complex 7##NM_153603|COG7|91949|component of oligomeric golgi complex 7	0.035955	
chr1	165897461	165897582	reg1002880.p2	19.461	+	AF236637 AK294537 TSC_hg19_v1_chr1_+_165797063 AB062451	-100435	+	TSC_hg19_v1_chr1_+_165796794 NM_012474 BC002906	-100750	+	AK124964 BC009228 TSC_hg19_v1_chr1_+_165738255 BC071770	-159300	+	TSC_hg19_v1_chr1_-_166135951 NM_001017961	238433	-	TSC_hg19_v1_chr1_-_166135982 AB593134	238464	-	TSC_hg19_v1_chr1_-_166136076 BC114214	238619	-	AF236637|UCK2|7371|uridine-cytidine kinase 2##AK294537|UCK2|7371|uridine-cytidine kinase 2##AB062451|UCK2|7371|uridine-cytidine kinase 2##NM_012474|UCK2|7371|uridine-cytidine kinase 2##BC002906|UCK2|7371|uridine-cytidine kinase 2##AK124964|LOC100147773|100147773|uncharacterized LOC100147773##BC009228|LOC100147773|100147773|uncharacterized LOC100147773##BC071770|LOC100147773|100147773|uncharacterized LOC100147773##NM_001017961|FAM78B|149297|family with sequence similarity 78, member B##BC114214|FAM78B|149297|family with sequence similarity 78, member B	0.737245	CTCF.p2:-3:0.737
chr15	43517789	43517919	reg1000263.p1	19.457	+	TSC_hg19_v1_chr15_-_43513234 M30646 M30647 NM_000119 NM_001114134	-4576	-	TSC_hg19_v1_chr15_-_43513214 AK297663 M29399	-4648	-	AB527822 AK297146 BC096093 BC096094 BC099627 TSC_hg19_v1_chr15_-_43513189	-4748	-	AF035960 AF035961 BC119009 BC122859 NM_004245 NM_201631	41200	-	AF363393 NM_052955	76598	-	CU677535 TSC_hg19_v1_chr15_-_43622812 AB011119 AK292587 AK300820 BC015949 NM_014793	104899	-	M30646|EPB42|2038|erythrocyte membrane protein band 4.2##M30647|EPB42|2038|erythrocyte membrane protein band 4.2##NM_000119|EPB42|2038|erythrocyte membrane protein band 4.2##NM_001114134|EPB42|2038|erythrocyte membrane protein band 4.2##AK297663|EPB42|2038|erythrocyte membrane protein band 4.2##M29399|EPB42|2038|erythrocyte membrane protein band 4.2##AK297146|EPB42|2038|erythrocyte membrane protein band 4.2##BC096093|EPB42|2038|erythrocyte membrane protein band 4.2##BC096094|EPB42|2038|erythrocyte membrane protein band 4.2##BC099627|EPB42|2038|erythrocyte membrane protein band 4.2##AF035960|TGM5|9333|transglutaminase 5##AF035961|TGM5|9333|transglutaminase 5##BC119009|TGM5|9333|transglutaminase 5##BC122859|TGM5|9333|transglutaminase 5##NM_004245|TGM5|9333|transglutaminase 5##NM_201631|TGM5|9333|transglutaminase 5##AF363393|TGM7|116179|transglutaminase 7##NM_052955|TGM7|116179|transglutaminase 7##AK292587|LCMT2|9836|leucine carboxyl methyltransferase 2##AK300820|LCMT2|9836|leucine carboxyl methyltransferase 2##BC015949|LCMT2|9836|leucine carboxyl methyltransferase 2##NM_014793|LCMT2|9836|leucine carboxyl methyltransferase 2	0.842311	CTCF.p2:-10:0.842
chr16	22012428	22012561	reg1000258.p1	19.455	+	BC039562 BC021724 BC028605 NM_173806	-66	-	TSC_hg19_v1_chr16_+_21964701 AB587386 DQ891390 DQ894565	-47773	+	TSC_hg19_v1_chr16_+_21964679 J04973 BC003136	-47809	+	TSC_hg19_v1_chr16_+_22019464 NM_001164579 BC027604 BC053950	6994	+	AK098260 AK128606 AK307544 NM_173615	91367	+	TSC_hg19_v1_chr16_+_22217630 NM_013302 AK308757 BC032665	205179	+	BC039562|PDZD9|255762|PDZ domain containing 9##BC021724|PDZD9|255762|PDZ domain containing 9##BC028605|PDZD9|255762|PDZ domain containing 9##NM_173806|PDZD9|255762|PDZ domain containing 9##DQ891390|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##DQ894565|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##J04973|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##BC003136|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##NM_001164579|C16orf52|730094|chromosome 16 open reading frame 52##BC027604|C16orf52|730094|chromosome 16 open reading frame 52##BC053950|C16orf52|730094|chromosome 16 open reading frame 52##AK098260|VWA3A|146177|von Willebrand factor A domain containing 3A##AK128606|VWA3A|146177|von Willebrand factor A domain containing 3A##AK307544|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_173615|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase##BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase	0.999194	CTCF.p2:-11:0.999
chr9	139383199	139383328	reg1000259.p1	19.420	+	TSC_hg19_v1_chr9_-_139378220 AB593115	-5021	-	BC036221 NM_152571 AK055336	-5293	+	TSC_hg19_v1_chr9_-_139377505 AB002308 NM_014866	-5759	-	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	56987	-	NM_016215 AL512735 AY358903 BC088371 AY358902	174138	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	176952	+	AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##AB002308|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##NM_014866|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7	0.994428	CTCF.p2:0:0.994
chr1	200457928	200458061	reg1000284.p1	19.397	+	BC060820 NM_012482 TSC_hg19_v1_chr1_-_200379187 AK027284	-78800	-	TSC_hg19_v1_chr1_-_200379155 AK297233 AK022916 AK094701	-78877	-	AB384788 CU687444 AF125158 BC051905 TSC_hg19_v1_chr1_-_200378976	-79085	-	TSC_hg19_v1_chr1_-_200589869 D26361 NM_014875	131885	-	AK299219 BC020201 TSC_hg19_v1_chr1_-_200639024 AL136611 BC014183 AK307569	181035	-	TSC_hg19_v1_chr1_-_200639091 BC041801 NM_001031725	181114	-	BC060820|ZNF281|23528|zinc finger protein 281##NM_012482|ZNF281|23528|zinc finger protein 281##AK027284|ZNF281|23528|zinc finger protein 281##AK297233|ZNF281|23528|zinc finger protein 281##AK022916|ZNF281|23528|zinc finger protein 281##AK094701|ZNF281|23528|zinc finger protein 281##AF125158|ZNF281|23528|zinc finger protein 281##BC051905|ZNF281|23528|zinc finger protein 281##D26361|KIF14|9928|kinesin family member 14##NM_014875|KIF14|9928|kinesin family member 14##AK299219|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC020201|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AL136611|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC014183|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK307569|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC041801|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_001031725|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	0.889581	CTCF.p2:13:0.890
chr21	35296446	35296582	reg1000255.p1	19.385	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-8422	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-105844	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-281659	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	149327	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	149415	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	439832	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.945912	CTCF.p2:-26:0.946
chr13	27559566	27559703	reg1000129.p1	19.375	+	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	-224781	-	TSC_hg19_v1_chr13_+_27131892 AF454702	-427732	+	TSC_hg19_v1_chr13_+_27131854 AK289845 BC050283 NM_006646	-427800	+	DQ894074 AF022789 TSC_hg19_v1_chr13_-_27745948 AK289685	186227	-	TSC_hg19_v1_chr13_-_27746003 BC026072 NM_182488	186452	-	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	266108	+	AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12##AF454702|WASF3|10810|WAS protein family, member 3##AK289845|WASF3|10810|WAS protein family, member 3##BC050283|WASF3|10810|WAS protein family, member 3##NM_006646|WASF3|10810|WAS protein family, member 3##DQ894074|USP12|219333|ubiquitin specific peptidase 12##AF022789|USP12|219333|ubiquitin specific peptidase 12##AK289685|USP12|219333|ubiquitin specific peptidase 12##BC026072|USP12|219333|ubiquitin specific peptidase 12##NM_182488|USP12|219333|ubiquitin specific peptidase 12##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21	0.884816	CTCF.p2:-23:0.885
chr1	248100341	248100477	reg1000173.p1	19.368	+	NM_001005522	-16090	+	BC146848 EU831764 EU831842 NM_001001957	-41537	+	TSC_hg19_v1_chr1_+_248020607 AK096188	-79786	+	BC028158 NM_175911	83	+	BC140751 NM_001001963	11709	+	BC136816 NM_001004491	28174	+	NM_001005522|OR2T8|343172|olfactory receptor, family 2, subfamily T, member 8##BC146848|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3##EU831764|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3##EU831842|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3##NM_001001957|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3##AK096188|TRIM58|25893|tripartite motif containing 58##BC028158|OR2L13|284521|olfactory receptor, family 2, subfamily L, member 13##NM_175911|OR2L13|284521|olfactory receptor, family 2, subfamily L, member 13##BC140751|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8##NM_001001963|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8##BC136816|OR2AK2|391191|olfactory receptor, family 2, subfamily AK, member 2##NM_001004491|OR2AK2|391191|olfactory receptor, family 2, subfamily AK, member 2	1.967972	CTCF.p2:26:0.970	CTCF.p2:-69:0.998
chr9	33722223	33722338	reg1000181.p1	19.367	+	TSC_hg19_v1_chr9_+_33624216 M62898	-98062	+	NM_001244752	-197870	+	TSC_hg19_v1_chr9_-_33473921 NM_022917 NM_139235	-248350	-	AB298285 NM_001197097 NM_007343 AB528734 X71345 X72781 TSC_hg19_v1_chr9_+_33750676 BC030238 AY052783 AB298286 NM_001197098	28360	+	BC069476 BC069494 NM_002771 X15505 D45417	73284	+	TSC_hg19_v1_chr9_+_33817170 NM_017811	94904	+	M62898|ANXA2P2|304|annexin A2 pseudogene 2##NM_001244752|ANKRD18B|441459|ankyrin repeat domain 18B##NM_022917|NOL6|65083|nucleolar protein family 6 (RNA-associated)##NM_139235|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AB298285|PRSS3|5646|protease, serine, 3##NM_001197097|PRSS3|5646|protease, serine, 3##NM_007343|PRSS3|5646|protease, serine, 3##X71345|PRSS3|5646|protease, serine, 3##X72781|PRSS3|5646|protease, serine, 3##BC030238|PRSS3|5646|protease, serine, 3##AY052783|PRSS3|5646|protease, serine, 3##AB298286|PRSS3|5646|protease, serine, 3##NM_001197098|PRSS3|5646|protease, serine, 3##BC069476|PRSS3|5646|protease, serine, 3##BC069494|PRSS3|5646|protease, serine, 3##NM_002771|PRSS3|5646|protease, serine, 3##X15505|PRSS3|5646|protease, serine, 3##D45417|PRSS3|5646|protease, serine, 3##NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2	1.54385	CTCF.p2:23:0.546	CTCF.p2:-29:0.998
chr9	71199475	71199609	reg1000203.p1	19.336	+	DQ890797 DQ893952 BC029780 NM_153237 TSC_hg19_v1_chr9_-_71155800	-43777	-	BC033073 NM_021965	-227728	+	AY344641 AY344642 NM_199135 BC137365 BC137366 EU446685 BC103887	-281718	+	TSC_hg19_v1_chr9_+_71320206 AK295587 AK292734 NM_003558	120834	+	TSC_hg19_v1_chr9_+_71394980 NM_138333 BC013062 AK126379 AK304099	195409	+	CU680482 TSC_hg19_v1_chr9_+_71395147	195574	+	DQ890797|C9orf71|169693|chromosome 9 open reading frame 71##DQ893952|C9orf71|169693|chromosome 9 open reading frame 71##BC029780|C9orf71|169693|chromosome 9 open reading frame 71##NM_153237|C9orf71|169693|chromosome 9 open reading frame 71##BC033073|PGM5|5239|phosphoglucomutase 5##NM_021965|PGM5|5239|phosphoglucomutase 5##AY344641|FOXD4L3|286380|forkhead box D4-like 3##AY344642|FOXD4L3|286380|forkhead box D4-like 3##NM_199135|FOXD4L3|286380|forkhead box D4-like 3##BC137365|FOXD4L6|653404|forkhead box D4-like 6##BC137366|FOXD4L6|653404|forkhead box D4-like 6##EU446685|FOXD4L6|653404|forkhead box D4-like 6##BC103887|FOXD4L6|653404|forkhead box D4-like 6##AK295587|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##AK292734|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_003558|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_138333|FAM122A|116224|family with sequence similarity 122A##BC013062|FAM122A|116224|family with sequence similarity 122A##AK126379|FAM122A|116224|family with sequence similarity 122A	1.970029	CTCF.p2:-30:0.997	CTCF.p2:42:0.973
chr14	72219880	72220016	reg1000318.p1	19.335	+	AF090989 AF090990 NM_015556	-223907	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-845497	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-845815	+	AK294895 NM_001204423	178868	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	179205	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	179918	+	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6	0.969174	CTCF.p2:18:0.969
chr2	9954085	9954222	reg1000304.p1	19.331	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-183028	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	-183104	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	-183540	-	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	29467	+	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	137697	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	229639	+	NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11	0.999305	CTCF.p2:-8:0.983
chr17	72954122	72954238	reg1000257.p1	19.327	+	BC143799 AB463989 NM_178233 AB593153	-22286	+	AK000063 NM_178160	-33811	+	BC101096 BC101097 BC101098 BC101099 AK091243 AK296899 AX746872 NM_173477 AK289804	-34881	-	CU690082 AB527292 TSC_hg19_v1_chr17_-_72968758	14574	-	TSC_hg19_v1_chr17_-_72968846 AK304081 BC035372 AK074401 AL137556 AK095565 BC032219 NM_030630	14668	-	TSC_hg19_v1_chr17_+_72983726 AK294006 BC047534 NM_014603	29561	+	BC143799|OTOP3|347741|otopetrin 3##NM_178233|OTOP3|347741|otopetrin 3##AB593153|OTOP3|347741|otopetrin 3##AK000063|OTOP2|92736|otopetrin 2##NM_178160|OTOP2|92736|otopetrin 2##BC101096|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101097|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101098|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101099|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK091243|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK296899|USH1G|124590|Usher syndrome 1G (autosomal recessive)##NM_173477|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK289804|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK304081|C17orf28|283987|chromosome 17 open reading frame 28##BC035372|C17orf28|283987|chromosome 17 open reading frame 28##AK074401|C17orf28|283987|chromosome 17 open reading frame 28##AL137556|C17orf28|283987|chromosome 17 open reading frame 28##AK095565|C17orf28|283987|chromosome 17 open reading frame 28##BC032219|C17orf28|283987|chromosome 17 open reading frame 28##NM_030630|C17orf28|283987|chromosome 17 open reading frame 28##AK294006|CDR2L|30850|cerebellar degeneration-related protein 2-like##BC047534|CDR2L|30850|cerebellar degeneration-related protein 2-like##NM_014603|CDR2L|30850|cerebellar degeneration-related protein 2-like	0.933838	CTCF.p2:16:0.934
chr3	184279169	184279292	reg1000174.p1	19.309	+	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	-181190	+	BC130322 BC136338 BC143982 L33410 NM_000460 NM_001177597 NM_001177598 TSC_hg19_v1_chr3_-_184095936	-183292	-	TSC_hg19_v1_chr3_+_184081196 NM_006232 Z49199 BC000739 AB464044 EU446997	-198001	+	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	352	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	150533	-	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	250693	+	AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##BC130322|THPO|7066|thrombopoietin##BC136338|THPO|7066|thrombopoietin##BC143982|THPO|7066|thrombopoietin##L33410|THPO|7066|thrombopoietin##NM_000460|THPO|7066|thrombopoietin##NM_001177597|THPO|7066|thrombopoietin##NM_001177598|THPO|7066|thrombopoietin##NM_006232|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##Z49199|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##BC000739|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##EU446997|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3##AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)	1.257413	CTCF.p2:-9:0.883	CTCF.p2:-40:0.347
chr11	119537226	119537347	reg1000300.p1	19.293	+	BC037832 NM_006288	-243043	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-243377	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	-284887	-	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	62096	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	462260	-	AK299472 TSC_hg19_v1_chr11_-_120008323	470986	-	BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29	0.934284	CTCF.p2:-10:0.934
chr11	1859080	1859193	reg1000115.p1	19.285	+	NM_138567 AK075202 BC144657 BC144659 BC144660 BC144661	-3419	+	TSC_hg19_v1_chr11_-_1785210 NM_001909	-73901	-	TSC_hg19_v1_chr11_-_1785158 BC016320 M11233	-73979	-	NM_003282	1096	+	BC032148 NM_001145829	1582	+	NM_001145841	2295	+	NM_138567|SYT8|90019|synaptotagmin VIII##AK075202|SYT8|90019|synaptotagmin VIII##BC144657|SYT8|90019|synaptotagmin VIII##BC144659|SYT8|90019|synaptotagmin VIII##BC144660|SYT8|90019|synaptotagmin VIII##BC144661|SYT8|90019|synaptotagmin VIII##NM_001909|CTSD|1509|cathepsin D##BC016320|CTSD|1509|cathepsin D##M11233|CTSD|1509|cathepsin D##NM_003282|TNNI2|7136|troponin I type 2 (skeletal, fast)##BC032148|TNNI2|7136|troponin I type 2 (skeletal, fast)##NM_001145829|TNNI2|7136|troponin I type 2 (skeletal, fast)##NM_001145841|TNNI2|7136|troponin I type 2 (skeletal, fast)	0.979041	CTCF.p2:-10:0.979
chr1	23511274	23511412	reg1000271.p1	19.282	+	TSC_hg19_v1_chr1_-_23504281 AK093016 AX747858	-7057	-	TSC_hg19_v1_chr1_-_23495350 NM_001142546 NM_033631	-15993	-	TSC_hg19_v1_chr1_-_23495331 BC016175	-16007	-	BC007720 NM_000864	9878	-	TSC_hg19_v1_chr1_-_23670794 BX647784 AF000364 AK297405 AK311519 AK297382 BC110389 AK300029 BX640912 BC001449 AK313142 NM_001102397 NM_001102398 NM_001102399 NM_005826	159475	-	CU691148 EU446536 TSC_hg19_v1_chr1_-_23694804 AK308173 BC056400 AK092364 AX747503 AL834485 NM_030634	183355	-	AK093016|LUZP1|7798|leucine zipper protein 1##NM_001142546|LUZP1|7798|leucine zipper protein 1##NM_033631|LUZP1|7798|leucine zipper protein 1##BC016175|LUZP1|7798|leucine zipper protein 1##BC007720|HTR1D|3352|5-hydroxytryptamine (serotonin) receptor 1D##NM_000864|HTR1D|3352|5-hydroxytryptamine (serotonin) receptor 1D##BX647784|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##AF000364|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##AK297405|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##AK311519|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##AK297382|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##BC110389|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##AK300029|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##BX640912|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##BC001449|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##AK313142|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##NM_001102397|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##NM_001102398|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##NM_001102399|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##NM_005826|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##EU446536|ZNF436|80818|zinc finger protein 436##AK308173|ZNF436|80818|zinc finger protein 436##BC056400|ZNF436|80818|zinc finger protein 436##AK092364|ZNF436|80818|zinc finger protein 436##AL834485|ZNF436|80818|zinc finger protein 436##NM_030634|ZNF436|80818|zinc finger protein 436	0.999671	CTCF.p2:10:1.000
chr5	37837611	37837740	reg1000332.p1	19.276	+	AJ001897 AJ001898 NM_001190468 NM_001190469	-1747	-	AJ001899 NM_199231	-2083	-	TSC_hg19_v1_chr5_+_37379419 AL512685 BC009648 NM_018034 BC025315 AK001095	-458245	+	AF053748 NM_000514	2106	-	NM_001205301 NM_152403 AK096474 TSC_hg19_v1_chr5_+_38258532	420848	+	BX647551 TSC_hg19_v1_chr5_+_38258660 BC063822 AK291602	420991	+	AJ001897|GDNF|2668|glial cell derived neurotrophic factor##AJ001898|GDNF|2668|glial cell derived neurotrophic factor##NM_001190468|GDNF|2668|glial cell derived neurotrophic factor##NM_001190469|GDNF|2668|glial cell derived neurotrophic factor##AJ001899|GDNF|2668|glial cell derived neurotrophic factor##NM_199231|GDNF|2668|glial cell derived neurotrophic factor##AL512685|WDR70|55100|WD repeat domain 70##BC009648|WDR70|55100|WD repeat domain 70##NM_018034|WDR70|55100|WD repeat domain 70##BC025315|WDR70|55100|WD repeat domain 70##AK001095|WDR70|55100|WD repeat domain 70##AF053748|GDNF|2668|glial cell derived neurotrophic factor##NM_000514|GDNF|2668|glial cell derived neurotrophic factor##NM_001205301|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_152403|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK096474|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BX647551|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC063822|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK291602|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	0.942318	CTCF.p2:-10:0.942
chr22	45093408	45093535	reg1000329.p1	19.271	+	AK091884 TSC_hg19_v1_chr22_+_45072964 AK055848	-20501	+	NM_001017530 NM_001198721 NM_015366	-20784	+	TSC_hg19_v1_chr22_+_45064630 AY859540 NM_001017528 NM_001017529	-28976	+	TSC_hg19_v1_chr22_+_45098090 NM_181333	4597	+	AK291564 TSC_hg19_v1_chr22_+_45098246 AF177331 AL355192 NM_181334	4782	+	AK001306 NM_001017526 NM_001198726 NM_181335 BC059382 BC067824 BC048280	54990	+	AK091884|PRR5|55615|proline rich 5 (renal)##AK055848|PRR5|55615|proline rich 5 (renal)##NM_001017530|PRR5|55615|proline rich 5 (renal)##NM_001198721|PRR5|55615|proline rich 5 (renal)##NM_015366|PRR5|55615|proline rich 5 (renal)##AY859540|PRR5|55615|proline rich 5 (renal)##NM_001017528|PRR5|55615|proline rich 5 (renal)##NM_001017529|PRR5|55615|proline rich 5 (renal)##NM_181333|PRR5|55615|proline rich 5 (renal)##AK291564|PRR5|55615|proline rich 5 (renal)##AF177331|PRR5|55615|proline rich 5 (renal)##AL355192|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181334|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##AK001306|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001017526|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001198726|ARHGAP8|23779|Rho GTPase activating protein 8##NM_181335|ARHGAP8|23779|Rho GTPase activating protein 8##BC059382|ARHGAP8|23779|Rho GTPase activating protein 8##BC067824|ARHGAP8|23779|Rho GTPase activating protein 8##BC048280|ARHGAP8|23779|Rho GTPase activating protein 8	1.251108	CTCF.p2:-1:0.999	CTCF.p2:74:0.252
chr13	49343350	49343479	reg1000178.p1	19.269	+	AB041947 AB038269 BC096832 BC069160 NM_020377 AB590816	-62629	+	AK122778 TSC_hg19_v1_chr13_-_49110119	-233296	-	AB209543 TSC_hg19_v1_chr13_-_49107365	-236050	-	TSC_hg19_v1_chr13_+_49550058 AJ749706 NM_001079673 BX648706 BX648141 AK056071	206746	+	TSC_hg19_v1_chr13_+_49550791 BC051029	207307	+	TSC_hg19_v1_chr13_+_49550938 BX640739	207511	+	AB041947|CYSLTR2|57105|cysteinyl leukotriene receptor 2##AB038269|CYSLTR2|57105|cysteinyl leukotriene receptor 2##BC096832|CYSLTR2|57105|cysteinyl leukotriene receptor 2##BC069160|CYSLTR2|57105|cysteinyl leukotriene receptor 2##NM_020377|CYSLTR2|57105|cysteinyl leukotriene receptor 2##AK122778|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AB209543|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AJ749706|FNDC3A|22862|fibronectin type III domain containing 3A##NM_001079673|FNDC3A|22862|fibronectin type III domain containing 3A##BX648706|FNDC3A|22862|fibronectin type III domain containing 3A##BX648141|FNDC3A|22862|fibronectin type III domain containing 3A##AK056071|FNDC3A|22862|fibronectin type III domain containing 3A##BC051029|FNDC3A|22862|fibronectin type III domain containing 3A##BX640739|FNDC3A|22862|fibronectin type III domain containing 3A	0.098384	
chr13	21517811	21517929	reg1000268.p1	19.263	+	TSC_hg19_v1_chr13_-_21476909 NM_022459	-40933	-	BC050680 AB051508 AB384273 AK057924 BC098402 TSC_hg19_v1_chr13_-_21476886 AK302760	-41000	-	TSC_hg19_v1_chr13_-_21348081 AK055408 AK316604	-169783	-	TSC_hg19_v1_chr13_-_21635685 BC127671 AF207547 AB209897 BC071572	117795	-	TSC_hg19_v1_chr13_-_21635719 NM_014572	117846	-	NM_005870 TSC_hg19_v1_chr13_+_21714679	196797	+	NM_022459|XPO4|64328|exportin 4##BC050680|XPO4|64328|exportin 4##AB051508|XPO4|64328|exportin 4##AK057924|XPO4|64328|exportin 4##BC098402|XPO4|64328|exportin 4##AK302760|XPO4|64328|exportin 4##AK316604|N6AMT2|221143|N-6 adenine-specific DNA methyltransferase 2 (putative)##BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##NM_005870|SAP18|10284|Sin3A-associated protein, 18kDa	0.995406	CTCF.p2:3:0.995
chr19	18117903	18118034	reg1000276.p1	19.253	+	TSC_hg19_v1_chr19_+_18111932 NM_001025604 AK127940	-6018	+	NM_002248 U69883	-55858	+	BC013949 NM_138442	-72064	+	TSC_hg19_v1_chr19_+_18118978 AF193051 NM_015683 AK000689 AK128588 BC022516 AK314657 AB529119	1050	+	EU832463 EU832545 BC137404 BC137406 NM_005535 NM_153701 U03187 BC029121 TSC_hg19_v1_chr19_-_18197721 AK225919 AK290423	79764	-	TSC_hg19_v1_chr19_+_18208608 AB527184 NM_015016 AB011133	90641	+	NM_001025604|ARRDC2|27106|arrestin domain containing 2##AK127940|ARRDC2|27106|arrestin domain containing 2##NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##BC013949|CCDC124|115098|coiled-coil domain containing 124##NM_138442|CCDC124|115098|coiled-coil domain containing 124##AF193051|ARRDC2|27106|arrestin domain containing 2##NM_015683|ARRDC2|27106|arrestin domain containing 2##AK000689|ARRDC2|27106|arrestin domain containing 2##AK128588|ARRDC2|27106|arrestin domain containing 2##BC022516|ARRDC2|27106|arrestin domain containing 2##AK314657|ARRDC2|27106|arrestin domain containing 2##EU832463|IL12RB1|3594|interleukin 12 receptor, beta 1##EU832545|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137404|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137406|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_005535|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_153701|IL12RB1|3594|interleukin 12 receptor, beta 1##U03187|IL12RB1|3594|interleukin 12 receptor, beta 1##BC029121|IL12RB1|3594|interleukin 12 receptor, beta 1##AK225919|IL12RB1|3594|interleukin 12 receptor, beta 1##AK290423|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_015016|MAST3|23031|microtubule associated serine/threonine kinase 3##AB011133|MAST3|23031|microtubule associated serine/threonine kinase 3	0.997021	CTCF.p2:-6:0.997
chr2	42097009	42097114	reg1000202.p1	19.250	+	Y12878 Y12885 AK291696 BX537482 NM_001112802	-1357489	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	-1417839	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-1439630	-	AK124893 NM_001242815	83881	-	TSC_hg19_v1_chr2_+_42275160 NM_138370	178071	+	AB528999 TSC_hg19_v1_chr2_+_42275979	178900	+	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)	0.995184	CTCF.p2:-17:0.995
chr20	25046497	25046621	reg1000283.p1	19.247	+	AL832939 BC114612 AK314440 TSC_hg19_v1_chr20_-_25038780 BC044588 BC055008 AK127566 BC039261 NM_001252675 NM_001252677 NM_032501	-7880	-	AK125058 AK296306 NM_001252676	-33235	-	TSC_hg19_v1_chr20_-_24973410 NM_020531 AK301959	-73072	-	BC126228 BC136497 AF251033 AF251034 DQ854807 DQ854808 DQ854809 DQ854810 DQ854811 DQ854812 NM_014588 NM_199425	16202	-	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	129811	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	129921	+	AL832939|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC114612|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK314440|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC044588|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC055008|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK127566|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC039261|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252675|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252677|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_032501|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK125058|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK296306|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252676|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_020531|C20orf3|57136|chromosome 20 open reading frame 3##AK301959|C20orf3|57136|chromosome 20 open reading frame 3##BC126228|VSX1|30813|visual system homeobox 1##BC136497|VSX1|30813|visual system homeobox 1##AF251033|VSX1|30813|visual system homeobox 1##AF251034|VSX1|30813|visual system homeobox 1##DQ854807|VSX1|30813|visual system homeobox 1##DQ854808|VSX1|30813|visual system homeobox 1##DQ854809|VSX1|30813|visual system homeobox 1##DQ854810|VSX1|30813|visual system homeobox 1##DQ854811|VSX1|30813|visual system homeobox 1##DQ854812|VSX1|30813|visual system homeobox 1##NM_014588|VSX1|30813|visual system homeobox 1##NM_199425|VSX1|30813|visual system homeobox 1##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)	0.0	
chr11	118827386	118827508	reg1000286.p1	19.234	+	NM_006760 Y13645 BC113900 AY455312 AB009454	-384	+	AB094091 NM_182557	-45835	-	NM_032966 X68829	-63347	+	AB094092 NM_181721 BC028191 BC125040 BC038969	15031	+	TSC_hg19_v1_chr11_+_118868847 AB094093 NM_198489	41402	+	TSC_hg19_v1_chr11_+_118868864 BC126469 BC126471 BC144208 BC144209 BC144210 HQ258386	41437	+	NM_006760|UPK2|7379|uroplakin 2##Y13645|UPK2|7379|uroplakin 2##BC113900|UPK2|7379|uroplakin 2##AY455312|UPK2|7379|uroplakin 2##AB009454|UPK2|7379|uroplakin 2##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094092|FOXR1|283150|forkhead box R1##NM_181721|FOXR1|283150|forkhead box R1##BC028191|FOXR1|283150|forkhead box R1##BC125040|FOXR1|283150|forkhead box R1##BC038969|FOXR1|283150|forkhead box R1##AB094093|CCDC84|338657|coiled-coil domain containing 84##NM_198489|CCDC84|338657|coiled-coil domain containing 84##BC126469|CCDC84|338657|coiled-coil domain containing 84##BC126471|CCDC84|338657|coiled-coil domain containing 84##BC144208|CCDC84|338657|coiled-coil domain containing 84##BC144209|CCDC84|338657|coiled-coil domain containing 84##BC144210|CCDC84|338657|coiled-coil domain containing 84##HQ258386|CCDC84|338657|coiled-coil domain containing 84	1.899249	CTCF.p2:4:0.999	CTCF.p2:104:0.900
chr16	68738367	68738510	reg1000337.p1	19.234	+	X63629 TSC_hg19_v1_chr16_+_68679239 AB527800 EU832319 EU832404	-59184	+	TSC_hg19_v1_chr16_+_68679201 AK296968 AK312554 AK225396	-59233	+	NM_001793	-60288	+	AK312551 TSC_hg19_v1_chr16_+_68771194 AK297913 EU709494 NM_004360 BC141838 BC146662 L08599	32763	+	BC144283 TSC_hg19_v1_chr16_+_68771216 AK290012 Z13009	32781	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	32807	+	X63629|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##EU832319|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##EU832404|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK296968|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK312554|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK225396|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##NM_001793|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK312551|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK297913|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##EU709494|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##NM_004360|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC141838|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC146662|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##L08599|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC144283|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK290012|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##Z13009|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)	1.026098	CTCF.p2:-15:0.999
chr22	23728196	23728319	reg1000277.p1	19.228	+	TSC_hg19_v1_chr22_+_23540316 X14677 X14675	-187852	+	TSC_hg19_v1_chr22_+_23523013 X06418 EU216058 EU216059 EU216061 EU216062 EU216063 EU216064 EU216065 EU216067 EU216068 EU216069 EU216070 EU216072	-205208	+	TSC_hg19_v1_chr22_+_23522745 AB209991	-205457	+	TSC_hg19_v1_chr22_-_23744738 AK056130 AK092581 AX747609 AK092530 AX747585	16486	-	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	194178	-	BC056888 AL080197 BC063390 AK310349 NM_016449	246239	-	X06418|BCR|613|breakpoint cluster region##EU216058|BCR|613|breakpoint cluster region##EU216059|BCR|613|breakpoint cluster region##EU216061|BCR|613|breakpoint cluster region##EU216062|BCR|613|breakpoint cluster region##EU216063|BCR|613|breakpoint cluster region##EU216064|BCR|613|breakpoint cluster region##EU216067|BCR|613|breakpoint cluster region##EU216069|BCR|613|breakpoint cluster region##EU216070|BCR|613|breakpoint cluster region##AB209991|BCR|613|breakpoint cluster region##AK056130|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092581|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092530|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43	1.06891	CTCF.p2:10:1.000
chr5	138893257	138893365	reg1000182.p1	19.225	+	NM_198282 TSC_hg19_v1_chr5_-_138862344	-30968	-	TSC_hg19_v1_chr5_-_138862306 AK095896 AX775913 BC047779 AK290661	-31039	-	AK304726 BC146912 BC146913 DQ462572 NM_001077693 EU025066 TSC_hg19_v1_chr5_-_138842329	-51001	-	TSC_hg19_v1_chr5_+_138940760 BC033349 NM_003339 NM_181838 BC048426	47462	+	TSC_hg19_v1_chr5_+_138940966 AK001428 BC019052 AK001311 AY651263	47614	+	TSC_hg19_v1_chr5_+_138941350 U39317 AB590980	48037	+	NM_198282|TMEM173|340061|transmembrane protein 173##AK095896|TMEM173|340061|transmembrane protein 173##AX775913|TMEM173|340061|transmembrane protein 173##BC047779|TMEM173|340061|transmembrane protein 173##AK290661|TMEM173|340061|transmembrane protein 173##BC146912|ECSCR|641700|endothelial cell-specific chemotaxis regulator##BC146913|ECSCR|641700|endothelial cell-specific chemotaxis regulator##DQ462572|ECSCR|641700|endothelial cell-specific chemotaxis regulator##NM_001077693|ECSCR|641700|endothelial cell-specific chemotaxis regulator##EU025066|ECSCR|641700|endothelial cell-specific chemotaxis regulator##BC033349|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_003339|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_181838|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC048426|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001428|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC019052|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001311|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AY651263|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##U39317|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2	0.997779	CTCF.p2:4:0.998
chr3	112770176	112770312	reg1000151.p1	19.222	+	BC067743 TSC_hg19_v1_chr3_-_112738514 AK295954 AK293218 BC014673 NM_015412 CR749341	-31698	-	TSC_hg19_v1_chr3_-_112738512 AK301161 EU831596 EU831683 EU831956 EU832050 CU688320 AL117573 BC056663 AK295165 AK304022 AK024325 AK300811 AK304083	-31746	-	NM_014170 NM_138485 BC037163 TSC_hg19_v1_chr3_+_112709842 BC000003 AF161484 BC010137 AK289611 CU691454 DQ892307 DQ895506	-60422	+	AY358328 NM_033254 AK309055	161155	+	BC101582 BC113553 AK056472 NM_001164496 NM_018338	390095	-	TSC_hg19_v1_chr3_-_113233690 AK296160	463442	-	BC067743|C3orf17|25871|chromosome 3 open reading frame 17##AK295954|C3orf17|25871|chromosome 3 open reading frame 17##AK293218|C3orf17|25871|chromosome 3 open reading frame 17##BC014673|C3orf17|25871|chromosome 3 open reading frame 17##NM_015412|C3orf17|25871|chromosome 3 open reading frame 17##CR749341|C3orf17|25871|chromosome 3 open reading frame 17##AK301161|C3orf17|25871|chromosome 3 open reading frame 17##EU831596|C3orf17|25871|chromosome 3 open reading frame 17##EU831683|C3orf17|25871|chromosome 3 open reading frame 17##EU831956|C3orf17|25871|chromosome 3 open reading frame 17##EU832050|C3orf17|25871|chromosome 3 open reading frame 17##AL117573|C3orf17|25871|chromosome 3 open reading frame 17##BC056663|C3orf17|25871|chromosome 3 open reading frame 17##AK295165|C3orf17|25871|chromosome 3 open reading frame 17##AK304022|C3orf17|25871|chromosome 3 open reading frame 17##AK024325|C3orf17|25871|chromosome 3 open reading frame 17##AK300811|C3orf17|25871|chromosome 3 open reading frame 17##AK304083|C3orf17|25871|chromosome 3 open reading frame 17##NM_014170|GTPBP8|29083|GTP-binding protein 8 (putative)##NM_138485|GTPBP8|29083|GTP-binding protein 8 (putative)##BC037163|GTPBP8|29083|GTP-binding protein 8 (putative)##BC000003|GTPBP8|29083|GTP-binding protein 8 (putative)##AF161484|GTPBP8|29083|GTP-binding protein 8 (putative)##BC010137|GTPBP8|29083|GTP-binding protein 8 (putative)##AK289611|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ892307|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ895506|GTPBP8|29083|GTP-binding protein 8 (putative)##AY358328|BOC|91653|Boc homolog (mouse)##NM_033254|BOC|91653|Boc homolog (mouse)##AK309055|BOC|91653|Boc homolog (mouse)##BC101582|WDR52|55779|WD repeat domain 52##BC113553|WDR52|55779|WD repeat domain 52##AK056472|WDR52|55779|WD repeat domain 52##NM_001164496|WDR52|55779|WD repeat domain 52##NM_018338|WDR52|55779|WD repeat domain 52##AK296160|SPICE1|152185|spindle and centriole associated protein 1	0.999774	CTCF.p2:-8:1.000
chr10	115863196	115863326	reg1000147.p1	19.218	+	NM_000684 J03019	-59452	+	TSC_hg19_v1_chr10_+_115614419 NM_198514 AK090631 AX746547	-248842	+	D42045 NM_014881 AK307187	-249345	-	TSC_hg19_v1_chr10_-_115933963 BC100670 BC103499 BC103504 BC105632 BC152306 BC107430 BC070368 BX537964 AK307517 AK092620 AX747632 BC020842 BC030557	70671	-	NM_018017	71102	-	AK122916 AL833340 NM_198795 BX648664 BC063133	75810	+	NM_000684|ADRB1|153|adrenergic, beta-1-, receptor##J03019|ADRB1|153|adrenergic, beta-1-, receptor##NM_198514|NHLRC2|374354|NHL repeat containing 2##AK090631|NHLRC2|374354|NHL repeat containing 2##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A##BC100670|C10orf118|55088|chromosome 10 open reading frame 118##BC103499|C10orf118|55088|chromosome 10 open reading frame 118##BC103504|C10orf118|55088|chromosome 10 open reading frame 118##BC105632|C10orf118|55088|chromosome 10 open reading frame 118##BC152306|C10orf118|55088|chromosome 10 open reading frame 118##BC107430|C10orf118|55088|chromosome 10 open reading frame 118##BC070368|C10orf118|55088|chromosome 10 open reading frame 118##BX537964|C10orf118|55088|chromosome 10 open reading frame 118##AK307517|C10orf118|55088|chromosome 10 open reading frame 118##AK092620|C10orf118|55088|chromosome 10 open reading frame 118##BC020842|C10orf118|55088|chromosome 10 open reading frame 118##BC030557|C10orf118|55088|chromosome 10 open reading frame 118##NM_018017|C10orf118|55088|chromosome 10 open reading frame 118##AK122916|TDRD1|56165|tudor domain containing 1##AL833340|TDRD1|56165|tudor domain containing 1##NM_198795|TDRD1|56165|tudor domain containing 1##BX648664|TDRD1|56165|tudor domain containing 1##BC063133|TDRD1|56165|tudor domain containing 1	0.909485	CTCF.p2:19:0.909
chr1	94279673	94279787	reg1000149.p2	19.210	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	-132403	-	TSC_hg19_v1_chr1_+_94057602 BC084562	-222123	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-222190	+	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	64984	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	65018	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	95232	-	U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit	0.785959	CTCF.p2:9:0.786
chr20	796805	796920	reg1000285.p1	19.186	+	AK074650 BC009750 AK291706 NM_033409	-47685	-	AY129025 NM_033129	-140040	-	AK125343 TSC_hg19_v1_chr20_-_656445	-140417	-	AK314165 NM_001042353 TSC_hg19_v1_chr20_+_814388	17522	+	BC004222 NM_207121	19848	+	NM_031424 BC022238 AB196290 DQ431181	28503	+	AK074650|C20orf54|113278|chromosome 20 open reading frame 54##BC009750|C20orf54|113278|chromosome 20 open reading frame 54##AK291706|C20orf54|113278|chromosome 20 open reading frame 54##NM_033409|C20orf54|113278|chromosome 20 open reading frame 54##AY129025|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)##NM_033129|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)##AK314165|FAM110A|83541|family with sequence similarity 110, member A##NM_001042353|FAM110A|83541|family with sequence similarity 110, member A##BC004222|FAM110A|83541|family with sequence similarity 110, member A##NM_207121|FAM110A|83541|family with sequence similarity 110, member A##NM_031424|FAM110A|83541|family with sequence similarity 110, member A##BC022238|FAM110A|83541|family with sequence similarity 110, member A##AB196290|FAM110A|83541|family with sequence similarity 110, member A##DQ431181|FAM110A|83541|family with sequence similarity 110, member A	0.783753	CTCF.p2:-13:0.784
chr5	126011919	126012054	reg1000316.p1	19.185	+	BC130495 BC130497 AK131015 NM_207408 HQ258080	-44571	+	AK023255 NM_032177 TSC_hg19_v1_chr5_+_125936641 BC021161 AK024065 AK298497 AK225464 CR457305 DQ893213 DQ896542	-75354	+	TSC_hg19_v1_chr5_-_125930891 AB489160 EU831757 EU831835 S74728 BC073174 BC071712 AK295526 BC002515 AK312459 AK297365 NM_001182 NM_001201377 NM_001202404	-81130	-	NM_005573 BC052951	100329	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	100845	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	100896	+	BC130495|C5orf48|389320|chromosome 5 open reading frame 48##BC130497|C5orf48|389320|chromosome 5 open reading frame 48##AK131015|C5orf48|389320|chromosome 5 open reading frame 48##NM_207408|C5orf48|389320|chromosome 5 open reading frame 48##HQ258080|C5orf48|389320|chromosome 5 open reading frame 48##AK023255|PHAX|51808|phosphorylated adaptor for RNA export##NM_032177|PHAX|51808|phosphorylated adaptor for RNA export##BC021161|PHAX|51808|phosphorylated adaptor for RNA export##AK024065|PHAX|51808|phosphorylated adaptor for RNA export##AK298497|PHAX|51808|phosphorylated adaptor for RNA export##AK225464|PHAX|51808|phosphorylated adaptor for RNA export##CR457305|PHAX|51808|phosphorylated adaptor for RNA export##DQ893213|PHAX|51808|phosphorylated adaptor for RNA export##DQ896542|PHAX|51808|phosphorylated adaptor for RNA export##EU831757|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##EU831835|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##S74728|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC073174|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC071712|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK295526|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC002515|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK312459|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK297365|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001182|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001201377|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001202404|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_005573|LMNB1|4001|lamin B1##BC052951|LMNB1|4001|lamin B1##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1##AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1	0.999223	CTCF.p2:-13:0.999
chr17	2285991	2286098	reg1000236.p1	19.173	+	TSC_hg19_v1_chr17_+_2240796 NM_014853 AB007857 NM_001098509 BC039204 AK294955 AB275762 AB385325 AB449878 AK304263	-45142	+	NM_018128 AB037822	-45306	-	AB463326 TSC_hg19_v1_chr17_-_2239749 AK026565	-46300	-	X96401 NM_020310 TSC_hg19_v1_chr17_-_2304355 AK291596	18272	-	TSC_hg19_v1_chr17_-_2415189 BX647255 AK294547 BC050603 BC001213 AL832612 AK027410 AK296464 NM_024086	129101	-	TSC_hg19_v1_chr17_+_2496944 NM_000430 L13386	210926	+	NM_014853|SGSM2|9905|small G protein signaling modulator 2##AB007857|SGSM2|9905|small G protein signaling modulator 2##NM_001098509|SGSM2|9905|small G protein signaling modulator 2##BC039204|SGSM2|9905|small G protein signaling modulator 2##AK294955|SGSM2|9905|small G protein signaling modulator 2##AB275762|SGSM2|9905|small G protein signaling modulator 2##AB449878|SGSM2|9905|small G protein signaling modulator 2##AK304263|SGSM2|9905|small G protein signaling modulator 2##NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AK026565|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##X96401|MNT|4335|MAX binding protein##NM_020310|MNT|4335|MAX binding protein##AK291596|MNT|4335|MAX binding protein##BX647255|METTL16|79066|methyltransferase like 16##AK294547|METTL16|79066|methyltransferase like 16##BC050603|METTL16|79066|methyltransferase like 16##BC001213|METTL16|79066|methyltransferase like 16##AL832612|METTL16|79066|methyltransferase like 16##AK027410|METTL16|79066|methyltransferase like 16##AK296464|METTL16|79066|methyltransferase like 16##NM_024086|METTL16|79066|methyltransferase like 16##NM_000430|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13386|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	0.987434	CTCF.p2:7:0.987
chr1	110319590	110319717	reg1000313.p1	19.159	+	AY074930 TSC_hg19_v1_chr1_-_110306546 AK307932 AK310979 AK308196 AK025175 AK225235 BC012926 AK292198 AK290261 NM_024526 NM_133181 NM_139053	-13069	-	BC008790 NM_000849	-35994	-	BT019945 CR542108 AB527634 DQ891834 EU176637 BC000088 EF363096 J05459 AB209816 AK313444 TSC_hg19_v1_chr1_-_110282939 AK304300	-36725	-	NM_000757 NM_172210 NM_172212	133579	+	BC021117 TSC_hg19_v1_chr1_+_110453470 AK291660 M37435 M27087 U22386 AB527768 M64592	133897	+	AF315687 TSC_hg19_v1_chr1_+_110527316	207658	+	AY074930|EPS8L3|79574|EPS8-like 3##AK307932|EPS8L3|79574|EPS8-like 3##AK310979|EPS8L3|79574|EPS8-like 3##AK308196|EPS8L3|79574|EPS8-like 3##AK025175|EPS8L3|79574|EPS8-like 3##AK225235|EPS8L3|79574|EPS8-like 3##BC012926|EPS8L3|79574|EPS8-like 3##AK292198|EPS8L3|79574|EPS8-like 3##AK290261|EPS8L3|79574|EPS8-like 3##NM_024526|EPS8L3|79574|EPS8-like 3##NM_133181|EPS8L3|79574|EPS8-like 3##NM_139053|EPS8L3|79574|EPS8-like 3##BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)##NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)##BT019945|GSTM3|2947|glutathione S-transferase mu 3 (brain)##CR542108|GSTM3|2947|glutathione S-transferase mu 3 (brain)##DQ891834|GSTM3|2947|glutathione S-transferase mu 3 (brain)##EU176637|GSTM3|2947|glutathione S-transferase mu 3 (brain)##BC000088|GSTM3|2947|glutathione S-transferase mu 3 (brain)##EF363096|GSTM3|2947|glutathione S-transferase mu 3 (brain)##J05459|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AB209816|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AK313444|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AK304300|GSTM3|2947|glutathione S-transferase mu 3 (brain)##NM_000757|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172210|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172212|CSF1|1435|colony stimulating factor 1 (macrophage)##BC021117|CSF1|1435|colony stimulating factor 1 (macrophage)##AK291660|CSF1|1435|colony stimulating factor 1 (macrophage)##M37435|CSF1|1435|colony stimulating factor 1 (macrophage)##M27087|CSF1|1435|colony stimulating factor 1 (macrophage)##U22386|CSF1|1435|colony stimulating factor 1 (macrophage)##M64592|CSF1|1435|colony stimulating factor 1 (macrophage)##AF315687|AHCYL1|10768|adenosylhomocysteinase-like 1	0.999833	CTCF.p2:-14:1.000
chr15	74419987	74420096	reg1000131.p2	19.125	+	BC131515 AK292574 AF263742 NM_001038640	-45161	-	TSC_hg19_v1_chr15_+_74287153 AB384942 CU674024 BT009911	-132885	+	TSC_hg19_v1_chr15_+_74287135 M79462 M79463 M79464 M80185 AB208950	-132902	+	AK092302 AX747465 AB040898 BC152429 NM_001130136	1665	+	AK309388 NM_001130137 BC028042	1951	+	NM_001130138	2548	+	BC131515|GOLGA6A|342096|golgin A6 family, member A##AK292574|GOLGA6A|342096|golgin A6 family, member A##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001038640|GOLGA6A|342096|golgin A6 family, member A##BT009911|PML|5371|promyelocytic leukemia##M79462|PML|5371|promyelocytic leukemia##M79463|PML|5371|promyelocytic leukemia##M79464|PML|5371|promyelocytic leukemia##M80185|PML|5371|promyelocytic leukemia##AB208950|PML|5371|promyelocytic leukemia##AK092302|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AB040898|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC152429|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130136|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130137|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC028042|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130138|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	1.359847	CTCF.p2:5:0.993	CTCF.p2:-36:0.367
chr1	114889257	114889396	reg1000294.p1	19.120	+	BC044948 NM_001253772	-192855	-	AK056448 NM_205848	-194265	-	AY358954 NM_020190 AY464015 AK092766 AX747716 AK075369 TSC_hg19_v1_chr1_+_114522099 AK297902 AF201945 AK223221 BC009920 AK222471 AK075479 AK075353 AK075544 AB590196 DQ892781 DQ896028 CU679529	-367243	+	TSC_hg19_v1_chr1_-_115053724 AB384564 AB029036	164384	-	TSC_hg19_v1_chr1_-_115053767 AF119043 AF220136 AF220137 NM_015906 NM_033020	164452	-	AB451245 AB451369 AB528339 AF081788 BT019390 CR542037 CU675083 DQ892529 EU176700 EU832613 EU832684 TSC_hg19_v1_chr1_-_115124237 BC005285 BC012623 BC039238 AK222637 AK313141 BC022880 AB020623 NM_005872	234917	-	BC044948|SYT6|148281|synaptotagmin VI##NM_001253772|SYT6|148281|synaptotagmin VI##AK056448|SYT6|148281|synaptotagmin VI##NM_205848|SYT6|148281|synaptotagmin VI##AY358954|OLFML3|56944|olfactomedin-like 3##NM_020190|OLFML3|56944|olfactomedin-like 3##AY464015|OLFML3|56944|olfactomedin-like 3##AK092766|OLFML3|56944|olfactomedin-like 3##AK075369|OLFML3|56944|olfactomedin-like 3##AK297902|OLFML3|56944|olfactomedin-like 3##AF201945|OLFML3|56944|olfactomedin-like 3##AK223221|OLFML3|56944|olfactomedin-like 3##BC009920|OLFML3|56944|olfactomedin-like 3##AK222471|OLFML3|56944|olfactomedin-like 3##AK075479|OLFML3|56944|olfactomedin-like 3##AK075353|OLFML3|56944|olfactomedin-like 3##AK075544|OLFML3|56944|olfactomedin-like 3##DQ892781|OLFML3|56944|olfactomedin-like 3##DQ896028|OLFML3|56944|olfactomedin-like 3##AB029036|TRIM33|51592|tripartite motif containing 33##AF119043|TRIM33|51592|tripartite motif containing 33##AF220136|TRIM33|51592|tripartite motif containing 33##AF220137|TRIM33|51592|tripartite motif containing 33##NM_015906|TRIM33|51592|tripartite motif containing 33##NM_033020|TRIM33|51592|tripartite motif containing 33##AB451245|BCAS2|10286|breast carcinoma amplified sequence 2##AB451369|BCAS2|10286|breast carcinoma amplified sequence 2##AF081788|BCAS2|10286|breast carcinoma amplified sequence 2##BT019390|BCAS2|10286|breast carcinoma amplified sequence 2##CR542037|BCAS2|10286|breast carcinoma amplified sequence 2##DQ892529|BCAS2|10286|breast carcinoma amplified sequence 2##EU176700|BCAS2|10286|breast carcinoma amplified sequence 2##EU832613|BCAS2|10286|breast carcinoma amplified sequence 2##EU832684|BCAS2|10286|breast carcinoma amplified sequence 2##BC005285|BCAS2|10286|breast carcinoma amplified sequence 2##BC012623|BCAS2|10286|breast carcinoma amplified sequence 2##BC039238|BCAS2|10286|breast carcinoma amplified sequence 2##AK222637|BCAS2|10286|breast carcinoma amplified sequence 2##AK313141|BCAS2|10286|breast carcinoma amplified sequence 2##BC022880|BCAS2|10286|breast carcinoma amplified sequence 2##AB020623|BCAS2|10286|breast carcinoma amplified sequence 2##NM_005872|BCAS2|10286|breast carcinoma amplified sequence 2	0.946084	CTCF.p2:9:0.946
chr3	39329939	39330091	reg1000293.p1	19.115	+	TSC_hg19_v1_chr3_-_39323217 AB464486 NM_001171174	-6808	-	NM_001171171	-7252	-	NM_001171172	-8086	-	AK314957 NM_005201 AF005210 BC107152 BC107159 D49919 BC074743	41230	+	TSC_hg19_v1_chr3_+_39424860 NM_017875 AK000558 AK225388 BC013194 CR457242	94975	+	BC070263 NM_002295 TSC_hg19_v1_chr3_+_39448210 BC066941 BC107567 BC005391 BC062714 D28372 AF503367 BC013827 BC050688 X15005 BC034537 BC053370 BC071968 BC010418 BC071693 BC018867 BC071969 BC073863	118195	+	NM_001171174|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171171|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171172|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK314957|CCR8|1237|chemokine (C-C motif) receptor 8##NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8##AF005210|CCR8|1237|chemokine (C-C motif) receptor 8##BC107152|CCR8|1237|chemokine (C-C motif) receptor 8##BC107159|CCR8|1237|chemokine (C-C motif) receptor 8##D49919|CCR8|1237|chemokine (C-C motif) receptor 8##BC074743|CCR8|1237|chemokine (C-C motif) receptor 8##NM_017875|SLC25A38|54977|solute carrier family 25, member 38##AK000558|SLC25A38|54977|solute carrier family 25, member 38##AK225388|SLC25A38|54977|solute carrier family 25, member 38##BC013194|SLC25A38|54977|solute carrier family 25, member 38##CR457242|SLC25A38|54977|solute carrier family 25, member 38##BC070263|RPSA|3921|ribosomal protein SA##NM_002295|RPSA|3921|ribosomal protein SA##BC066941|RPSA|3921|ribosomal protein SA##BC107567|RPSA|3921|ribosomal protein SA##BC005391|RPSA|3921|ribosomal protein SA##BC062714|RPSA|3921|ribosomal protein SA##AF503367|RPSA|3921|ribosomal protein SA##BC013827|RPSA|3921|ribosomal protein SA##BC050688|RPSA|3921|ribosomal protein SA##X15005|RPSA|3921|ribosomal protein SA##BC034537|RPSA|3921|ribosomal protein SA##BC053370|RPSA|3921|ribosomal protein SA##BC071968|RPSA|3921|ribosomal protein SA##BC010418|RPSA|3921|ribosomal protein SA##BC071693|RPSA|3921|ribosomal protein SA##BC018867|RPSA|3921|ribosomal protein SA##BC071969|RPSA|3921|ribosomal protein SA##BC073863|RPSA|3921|ribosomal protein SA	1.124679	CTCF.p2:68:0.939
chr10	65801076	65801182	reg1000094.p1	19.113	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-519888	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-519967	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-520014	+	NM_178011 BX640611 AY358315 BC111492	2884686	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	3624267	-	AF091606 AK313882 NM_013266	3654808	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	1.281465	CTCF.p2:-28:0.835	CTCF.p2:37:0.447
chr12	54793203	54793332	reg1000335.p1	19.110	+	TSC_hg19_v1_chr12_-_54785083 AK024404 BC029752 AK315613 NM_001130967 NM_001130968	-8179	-	AB593085 TSC_hg19_v1_chr12_-_54779552 AK092724 AY461717	-13733	-	AK296564 TSC_hg19_v1_chr12_-_54778485 AF304052 NM_015481	-14793	-	M13918 TSC_hg19_v1_chr12_-_54813000 CU679109 DQ892690 EU176722 AB385038 AK291570 AK311051	19701	-	TSC_hg19_v1_chr12_-_54813005 AK304696 X06256	19737	-	TSC_hg19_v1_chr12_-_54813025 BC008786 AK312414 NM_002205	19768	-	AK024404|ZNF385A|25946|zinc finger protein 385A##BC029752|ZNF385A|25946|zinc finger protein 385A##AK315613|ZNF385A|25946|zinc finger protein 385A##NM_001130967|ZNF385A|25946|zinc finger protein 385A##NM_001130968|ZNF385A|25946|zinc finger protein 385A##AB593085|ZNF385A|25946|zinc finger protein 385A##AK092724|ZNF385A|25946|zinc finger protein 385A##AY461717|ZNF385A|25946|zinc finger protein 385A##AK296564|ZNF385A|25946|zinc finger protein 385A##AF304052|ZNF385A|25946|zinc finger protein 385A##NM_015481|ZNF385A|25946|zinc finger protein 385A##M13918|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##DQ892690|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##EU176722|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK291570|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK311051|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK304696|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##X06256|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##BC008786|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK312414|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##NM_002205|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)	0.999893	CTCF.p2:-6:1.000
chr6	73839740	73839874	reg1000326.p1	19.104	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	-507746	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	-507918	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	-508237	+	BC004267 NM_001126063	95367	-	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	133059	-	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	133166	+	AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC004267|KHDC1L|100129128|KH homology domain containing 1-like##NM_001126063|KHDC1L|100129128|KH homology domain containing 1-like##BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1	0.86144	CTCF.p2:14:0.861
chr9	140122071	140122201	reg1000136.p1	19.095	+	NM_001190228	-119	+	BC052297 NM_199001	-2493	+	NM_031297	-6362	-	BC029942 NM_001177316 NM_001177317	3072	+	AK095999 NM_080877	3248	+	TSC_hg19_v1_chr9_+_140135712 NM_006088	13572	+	NM_001190228|RNF224|643596|ring finger protein 224##BC052297|C9orf169|375791|chromosome 9 open reading frame 169##NM_199001|C9orf169|375791|chromosome 9 open reading frame 169##NM_031297|RNF208|727800|ring finger protein 208##BC029942|SLC34A3|142680|solute carrier family 34 (sodium phosphate), member 3##NM_001177316|SLC34A3|142680|solute carrier family 34 (sodium phosphate), member 3##NM_001177317|SLC34A3|142680|solute carrier family 34 (sodium phosphate), member 3##AK095999|SLC34A3|142680|solute carrier family 34 (sodium phosphate), member 3##NM_080877|SLC34A3|142680|solute carrier family 34 (sodium phosphate), member 3##NM_006088|TUBB4B|10383|tubulin, beta 4B class IVb	1.3815	CTCF.p2:6:0.925	CTCF.p2:35:0.457
chr9	124082470	124082593	reg1000168.p1	19.089	+	TSC_hg19_v1_chr9_+_124062108 AK315494 X04412 BC026033 DQ892187 EU176693 AK307859	-20309	+	TSC_hg19_v1_chr9_+_124062082 NM_000177	-20539	+	AK299453 TSC_hg19_v1_chr9_+_124048902	-33643	+	BC017491 TSC_hg19_v1_chr9_+_124086860	4341	+	CR542100 X60067 AB528375 DQ891058 DQ894236 CU679799 TSC_hg19_v1_chr9_-_124132480 M81635	49944	-	BC010703 TSC_hg19_v1_chr9_-_124132529 AK307999 AK304449 AK304518 AK302977 NM_004099 NM_198194	50011	-	AK315494|GSN|2934|gelsolin##X04412|GSN|2934|gelsolin##BC026033|GSN|2934|gelsolin##DQ892187|GSN|2934|gelsolin##EU176693|GSN|2934|gelsolin##AK307859|GSN|2934|gelsolin##NM_000177|GSN|2934|gelsolin##AK299453|GSN|2934|gelsolin##BC017491|GSN|2934|gelsolin##CR542100|STOM|2040|stomatin##X60067|STOM|2040|stomatin##DQ891058|STOM|2040|stomatin##DQ894236|STOM|2040|stomatin##M81635|STOM|2040|stomatin##BC010703|STOM|2040|stomatin##AK307999|STOM|2040|stomatin##AK304449|STOM|2040|stomatin##AK304518|STOM|2040|stomatin##AK302977|STOM|2040|stomatin##NM_004099|STOM|2040|stomatin##NM_198194|STOM|2040|stomatin	1.941208	CTCF.p2:-27:0.991	CTCF.p2:44:0.934
chr14	77342494	77342623	reg1000279.p1	19.081	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-49763	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-63296	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-63348	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	152126	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	152502	-	AK124327 TSC_hg19_v1_chr14_-_77542533	199975	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.982575	CTCF.p2:-22:0.983
chr20	31490411	31490549	reg1000411.p1	19.077	+	TSC_hg19_v1_chr20_+_31407780 AK312590 BC128442	-82684	+	TSC_hg19_v1_chr20_+_31407759 NM_012325 AK297273 BC106068 U24166 BC109281 BC040410	-82745	+	TSC_hg19_v1_chr20_+_31367638 AF176228 NM_175850	-122833	+	BC029528 AF401350 BC026118 NM_080675	101754	-	TSC_hg19_v1_chr20_+_31595393 AK172819 AK027068 NM_025227	104921	+	TSC_hg19_v1_chr20_+_31595480 AY358723 AK304064	105001	+	AK312590|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC128442|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##NM_012325|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##AK297273|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC106068|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##U24166|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC109281|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC040410|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##BC029528|SUN5|140732|Sad1 and UNC84 domain containing 5##AF401350|SUN5|140732|Sad1 and UNC84 domain containing 5##BC026118|SUN5|140732|Sad1 and UNC84 domain containing 5##NM_080675|SUN5|140732|Sad1 and UNC84 domain containing 5##AK172819|BPIFB2|80341|BPI fold containing family B, member 2##AK027068|BPIFB2|80341|BPI fold containing family B, member 2##NM_025227|BPIFB2|80341|BPI fold containing family B, member 2##AY358723|BPIFB2|80341|BPI fold containing family B, member 2##AK304064|BPIFB2|80341|BPI fold containing family B, member 2	0.979669	CTCF.p2:-10:0.980
chr10	95136279	95136394	reg1000252.p1	19.075	+	AK075374 NM_000783 AF005418	-302680	+	AK027560 NM_057157	-303105	+	AY356349 NM_183374	-315316	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	105712	-	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	120052	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	190173	+	AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1	0.952059	CTCF.p2:-12:0.952
chr8	141477418	141477546	reg1000306.p1	19.074	+	AK128755 NM_031466	-8805	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	-9624	-	AB067469 TSC_hg19_v1_chr8_-_141467841	-9657	-	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	43910	+	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	44081	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	168142	-	AK128755|TRAPPC9|83696|trafficking protein particle complex 9##NM_031466|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2	0.943103	CTCF.p2:-12:0.943
chr18	78015819	78015936	reg1000165.p1	19.065	+	AB044556 AB178535 AB178536 AB527962 TSC_hg19_v1_chr18_-_78005398 BC060797 NM_032510	-10518	-	TSC_hg19_v1_chr18_+_77905812 AK056304	-110010	+	AK292566 TSC_hg19_v1_chr18_+_77867161 AB020670	-148709	+	None	None	None	None	None	None	None	None	None	AB044556|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##AB178535|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##AB178536|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##BC060797|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##NM_032510|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##AK056304|LOC100130522|100130522|uncharacterized LOC100130522##AK292566|ADNP2|22850|ADNP homeobox 2##AB020670|ADNP2|22850|ADNP homeobox 2	0.830069	CTCF.p2:6:0.830
chr1	8374465	8374589	reg1000175.p2	19.058	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-288129	-	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	-288166	-	AB528431 AJ276373 DQ892137 DQ895331 BC012839 TSC_hg19_v1_chr1_-_8075752	-298812	-	NM_001080397	9862	+	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	109490	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	503065	-	NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AJ276373|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ892137|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ895331|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC012839|ERRFI1|54206|ERBB receptor feedback inhibitor 1##NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats	0.963982	CTCF.p2:14:0.964
chr19	18169298	18169428	reg1000373.p1	19.048	+	TSC_hg19_v1_chr19_+_18118978 AF193051 NM_015683 AK000689 AK128588 BC022516 AK314657 AB529119	-50345	+	TSC_hg19_v1_chr19_+_18111932 NM_001025604 AK127940	-57413	+	NM_002248 U69883	-107253	+	EU832463 EU832545 BC137404 BC137406 NM_005535 NM_153701 U03187 BC029121 TSC_hg19_v1_chr19_-_18197721 AK225919 AK290423	28369	-	TSC_hg19_v1_chr19_+_18208608 AB527184 NM_015016 AB011133	39246	+	BC063240 TSC_hg19_v1_chr19_+_18263972	94618	+	AF193051|ARRDC2|27106|arrestin domain containing 2##NM_015683|ARRDC2|27106|arrestin domain containing 2##AK000689|ARRDC2|27106|arrestin domain containing 2##AK128588|ARRDC2|27106|arrestin domain containing 2##BC022516|ARRDC2|27106|arrestin domain containing 2##AK314657|ARRDC2|27106|arrestin domain containing 2##NM_001025604|ARRDC2|27106|arrestin domain containing 2##AK127940|ARRDC2|27106|arrestin domain containing 2##NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##EU832463|IL12RB1|3594|interleukin 12 receptor, beta 1##EU832545|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137404|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137406|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_005535|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_153701|IL12RB1|3594|interleukin 12 receptor, beta 1##U03187|IL12RB1|3594|interleukin 12 receptor, beta 1##BC029121|IL12RB1|3594|interleukin 12 receptor, beta 1##AK225919|IL12RB1|3594|interleukin 12 receptor, beta 1##AK290423|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_015016|MAST3|23031|microtubule associated serine/threonine kinase 3##AB011133|MAST3|23031|microtubule associated serine/threonine kinase 3	0.999739	CTCF.p2:16:1.000
chr6	3056372	3056474	reg1000170.p1	19.044	+	TSC_hg19_v1_chr6_+_3000111 NM_000904 AK311746 AK056981 J02888	-56295	+	AK094983 NM_001195291 NM_004568	-84025	-	TSC_hg19_v1_chr6_-_2971981 AK314578	-84374	-	AK314176 TSC_hg19_v1_chr6_+_3064200 AB208926	7743	+	BC126254 BC126256 HQ258488 NM_003804 U50062 AK304701	20641	+	TSC_hg19_v1_chr6_+_3118961 AK297518 NM_004332 AK314909 AL832502 AJ617684 X81372	62528	+	NM_000904|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK311746|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK056981|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##J02888|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK094983|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_001195291|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_004568|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314578|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314176|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AB208926|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK297518|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##NM_004332|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AK314909|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AL832502|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AJ617684|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##X81372|BPHL|670|biphenyl hydrolase-like (serine hydrolase)	0.900575	CTCF.p2:19:0.901
chr17	74502553	74502683	reg1000190.p1	19.042	+	TSC_hg19_v1_chr17_-_74497506 BC016034 AK292135 NM_024599	-5159	-	AK303434 AY500247 AK292166 NM_001005498	-18720	-	NM_001088 U40347 AB593119 BC069434	-38961	+	AJ315162 AK098057 BC029798 AB057769 BC018822 NM_134268	31084	-	DQ390338 NM_001077620 BC146898 BC146904	33528	+	TSC_hg19_v1_chr17_+_74553850 AK123993 AK129904 AB073602 BC042949 AK055935 BX647993 BC100293	51261	+	BC016034|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292135|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_024599|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK303434|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AY500247|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292166|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001005498|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001088|AANAT|15|aralkylamine N-acetyltransferase##U40347|AANAT|15|aralkylamine N-acetyltransferase##AB593119|AANAT|15|aralkylamine N-acetyltransferase##BC069434|AANAT|15|aralkylamine N-acetyltransferase##AJ315162|CYGB|114757|cytoglobin##AK098057|CYGB|114757|cytoglobin##BC029798|CYGB|114757|cytoglobin##AB057769|CYGB|114757|cytoglobin##NM_134268|CYGB|114757|cytoglobin##DQ390338|PRCD|768206|progressive rod-cone degeneration##NM_001077620|PRCD|768206|progressive rod-cone degeneration##BC146898|PRCD|768206|progressive rod-cone degeneration##BC146904|PRCD|768206|progressive rod-cone degeneration##BC042949|LOC100507246|100507246|uncharacterized LOC100507246##BX647993|LOC100507246|100507246|uncharacterized LOC100507246##BC100293|LOC100507246|100507246|uncharacterized LOC100507246	0.997571	CTCF.p2:6:0.998
chr7	50245067	50245219	reg1000307.p1	19.040	+	NM_001161834	-109462	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	-112319	-	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-431873	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	99210	+	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	103176	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	272911	-	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1	0.999935	CTCF.p2:-24:1.000
chr6	33557561	33557694	reg1000061.p1	19.038	+	TSC_hg19_v1_chr6_-_33548037 AK303422 AK293547 NM_001188	-9584	-	U23765 U16811 TSC_hg19_v1_chr6_-_33547998 X84213 BC004431 BC032789 BC110337 AK091807 AK292093	-9712	-	TSC_hg19_v1_chr6_+_33422352 AK313571 AK122644 NM_152735 BC014978	-135255	+	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	31567	+	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	121836	-	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	121886	-	AK303422|BAK1|578|BCL2-antagonist/killer 1##AK293547|BAK1|578|BCL2-antagonist/killer 1##NM_001188|BAK1|578|BCL2-antagonist/killer 1##U23765|BAK1|578|BCL2-antagonist/killer 1##U16811|BAK1|578|BCL2-antagonist/killer 1##X84213|BAK1|578|BCL2-antagonist/killer 1##BC004431|BAK1|578|BCL2-antagonist/killer 1##BC032789|BAK1|578|BCL2-antagonist/killer 1##BC110337|BAK1|578|BCL2-antagonist/killer 1##AK091807|BAK1|578|BCL2-antagonist/killer 1##AK292093|BAK1|578|BCL2-antagonist/killer 1##AK313571|ZBTB9|221504|zinc finger and BTB domain containing 9##AK122644|ZBTB9|221504|zinc finger and BTB domain containing 9##NM_152735|ZBTB9|221504|zinc finger and BTB domain containing 9##BC014978|ZBTB9|221504|zinc finger and BTB domain containing 9##D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125	0.456709	CTCF.p2:-18:0.457
chr7	22150031	22150146	reg1000172.p1	19.038	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-164606	-	AJ320497 NM_003777	-567256	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-681764	+	AL833195 NM_012294	246433	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	389759	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	616735	+	AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)	1.272113	CTCF.p2:-5:0.940	CTCF.p2:-87:0.332
chr4	8470602	8470730	reg1000444.p1	19.033	+	TSC_hg19_v1_chr4_+_8442503 NM_152544	-28152	+	Y11411 BC017053 TSC_hg19_v1_chr4_-_8442447 AK225080 NM_001101667 NM_003501	-28210	-	TSC_hg19_v1_chr4_-_8430196 AK313242	-40465	-	AK128807 NM_080819 BC057778 AY359107	111649	+	AK056317 NM_001014447 NM_001014448 NM_003652 BC080539 BC006393 BC018913 TSC_hg19_v1_chr4_+_8594489	123773	+	U83411 TSC_hg19_v1_chr4_+_8594521	123857	+	NM_152544|METTL19|152992|methyltransferase like 19##Y11411|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##BC017053|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK225080|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_001101667|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_003501|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK313242|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK128807|GPR78|27201|G protein-coupled receptor 78##NM_080819|GPR78|27201|G protein-coupled receptor 78##BC057778|GPR78|27201|G protein-coupled receptor 78##AY359107|GPR78|27201|G protein-coupled receptor 78##AK056317|CPZ|8532|carboxypeptidase Z##NM_001014447|CPZ|8532|carboxypeptidase Z##NM_001014448|CPZ|8532|carboxypeptidase Z##NM_003652|CPZ|8532|carboxypeptidase Z##BC080539|CPZ|8532|carboxypeptidase Z##BC006393|CPZ|8532|carboxypeptidase Z##BC018913|CPZ|8532|carboxypeptidase Z##U83411|CPZ|8532|carboxypeptidase Z	0.988267	CTCF.p2:-2:0.988
chr10	49864376	49864516	reg1000270.p1	19.015	+	TSC_hg19_v1_chr10_-_49864302 AK055937	-141	-	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	-51359	-	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	-254774	+	TSC_hg19_v1_chr10_+_49892917 BC034937	28444	+	AK127650 NM_020945	29069	+	NM_001006939 BC036722	257834	-	AK055937|ARHGAP22|58504|Rho GTPase activating protein 22##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22##BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##BC034937|WDFY4|57705|WDFY family member 4##AK127650|WDFY4|57705|WDFY family member 4##NM_020945|WDFY4|57705|WDFY family member 4##NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18	1.584706	CTCF.p2:-31:0.613	CTCF.p2:34:0.972
chr22	42565097	42565219	reg1000159.p1	19.015	+	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	-38277	-	AB463001 CU013213 CU013501 M20403 X08006 BC066877 BC067432 TSC_hg19_v1_chr22_-_42526809 BC106757 BC106758 BC126858 CR456430 BC075023 BC075024	-38351	-	TSC_hg19_v1_chr22_+_42486980 AK123630 BC039542	-78132	+	AB527391 NM_005650 NM_181492	46219	-	BC038245 TSC_hg19_v1_chr22_-_42765218	200044	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	263223	-	AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013213|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013501|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##M20403|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##X08006|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC066877|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC067432|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106757|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106758|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC126858|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CR456430|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075023|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075024|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK123630|LOC100132273|100132273|uncharacterized LOC100132273##BC039542|LOC100132273|100132273|uncharacterized LOC100132273##NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1	1.137181	CTCF.p2:-20:0.994
chr11	119227118	119227271	reg1000169.p1	19.002	+	AJ862823 BC036675 AB055505 AK295203 AK055132 NM_015645 NM_031433	-9821	-	TSC_hg19_v1_chr11_-_119211575 AF329841 AY358383 BC029485	-15612	-	AL110261 AB590791 TSC_hg19_v1_chr11_-_119211170	-16092	-	AF079564 AK301805 AK292255 TSC_hg19_v1_chr11_-_119234855	7548	-	TSC_hg19_v1_chr11_-_119234904 AK309582 AF440755 NM_171997	7688	-	TSC_hg19_v1_chr11_-_119252321 BC002854 BC002955	25117	-	AJ862823|MFRP|83552|membrane frizzled-related protein##BC036675|MFRP|83552|membrane frizzled-related protein##AB055505|MFRP|83552|membrane frizzled-related protein##AK295203|MFRP|83552|membrane frizzled-related protein##AK055132|MFRP|83552|membrane frizzled-related protein##NM_015645|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##NM_031433|MFRP|83552|membrane frizzled-related protein##AF329841|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##AY358383|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##BC029485|MFRP|83552|membrane frizzled-related protein##AL110261|MFRP|83552|membrane frizzled-related protein##AF079564|USP2|9099|ubiquitin specific peptidase 2##AK301805|USP2|9099|ubiquitin specific peptidase 2##AK292255|USP2|9099|ubiquitin specific peptidase 2##AF440755|USP2|9099|ubiquitin specific peptidase 2##NM_171997|USP2|9099|ubiquitin specific peptidase 2##BC002854|USP2|9099|ubiquitin specific peptidase 2##BC002955|USP2|9099|ubiquitin specific peptidase 2	0.62478	CTCF.p2:-16:0.625
chr17	72375675	72375799	reg1000160.p1	19.000	+	BC143807 AB196530 AB528868 AY288421 NM_181790	-12143	+	NM_001080466	-17780	-	NM_153209 TSC_hg19_v1_chr17_+_72322355 BC067749 BC026362 BC110989 AK094619 BC143327 BC093631 BC104852	-53330	+	BC110848 BC004925 BC069202 NM_022036 BC125080 BC125081	51867	+	AK075397 AF207989 AK222909 TSC_hg19_v1_chr17_+_72428254 AK000249	52518	+	AJ276102 NM_018653	54098	+	BC143807|GPR142|350383|G protein-coupled receptor 142##AB196530|GPR142|350383|G protein-coupled receptor 142##AY288421|GPR142|350383|G protein-coupled receptor 142##NM_181790|GPR142|350383|G protein-coupled receptor 142##NM_001080466|BTBD17|388419|BTB (POZ) domain containing 17##NM_153209|KIF19|124602|kinesin family member 19##BC067749|KIF19|124602|kinesin family member 19##BC026362|KIF19|124602|kinesin family member 19##BC110989|KIF19|124602|kinesin family member 19##AK094619|KIF19|124602|kinesin family member 19##BC143327|KIF19|124602|kinesin family member 19##BC093631|KIF19|124602|kinesin family member 19##BC104852|KIF19|124602|kinesin family member 19##BC110848|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC004925|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC069202|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_022036|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125080|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125081|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AJ276102|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_018653|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	0.991886	CTCF.p2:-6:0.992
chr12	122492366	122492479	reg1000183.p1	18.997	+	AK296159 TSC_hg19_v1_chr12_+_122459903 NM_001024808 NM_020993 AK316486 BC113627 BC094723 HQ258124 AB590498	-32529	+	TSC_hg19_v1_chr12_+_122356497 NM_001178003 NM_144668 BC028421 BC036233	-135941	+	TSC_hg19_v1_chr12_+_122326731 AB003177 NM_002813 AK315389 BC002383 BC004184 BC004213 DQ893594 EU831432 EU831524 AB528684	-165727	+	TSC_hg19_v1_chr12_+_122516655 BC151841 NM_014938	24185	+	TSC_hg19_v1_chr12_+_122516682 AF312918	24295	+	BC069272 TSC_hg19_v1_chr12_+_122614551	122098	+	AK296159|BCL7A|605|B-cell CLL/lymphoma 7A##NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A##NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A##AK316486|BCL7A|605|B-cell CLL/lymphoma 7A##BC113627|BCL7A|605|B-cell CLL/lymphoma 7A##BC094723|BCL7A|605|B-cell CLL/lymphoma 7A##HQ258124|BCL7A|605|B-cell CLL/lymphoma 7A##NM_001178003|WDR66|144406|WD repeat domain 66##NM_144668|WDR66|144406|WD repeat domain 66##BC028421|WDR66|144406|WD repeat domain 66##BC036233|WDR66|144406|WD repeat domain 66##NM_002813|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK315389|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC002383|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004184|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004213|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##DQ893594|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831432|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831524|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC151841|MLXIP|22877|MLX interacting protein##NM_014938|MLXIP|22877|MLX interacting protein##AF312918|MLXIP|22877|MLX interacting protein##BC069272|MLXIP|22877|MLX interacting protein	0.981751	CTCF.p2:-18:0.982
chr3	49840101	49840244	reg1000167.p1	18.993	+	BC146674 NM_001007540 AY358221 BC132756 BC144445	-2912	-	NM_001006115 NM_153273 TSC_hg19_v1_chr3_-_49823976 AK295689	-16198	-	TSC_hg19_v1_chr3_-_49823964 D87452	-16211	-	BC012170 NM_203370 TSC_hg19_v1_chr3_+_49840695	528	+	CU675375 BT007026 DQ893307 DQ893707 TSC_hg19_v1_chr3_-_49851326 BC006378	11099	-	TSC_hg19_v1_chr3_-_49851387 NM_003335 L13852	11217	-	BC146674|CDHR4|389118|cadherin-related family member 4##NM_001007540|CDHR4|389118|cadherin-related family member 4##AY358221|CDHR4|389118|cadherin-related family member 4##BC132756|CDHR4|389118|cadherin-related family member 4##NM_001006115|IP6K1|9807|inositol hexakisphosphate kinase 1##NM_153273|IP6K1|9807|inositol hexakisphosphate kinase 1##AK295689|IP6K1|9807|inositol hexakisphosphate kinase 1##D87452|IP6K1|9807|inositol hexakisphosphate kinase 1##BC012170|FAM212A|389119|family with sequence similarity 212, member A##NM_203370|FAM212A|389119|family with sequence similarity 212, member A##BT007026|UBA7|7318|ubiquitin-like modifier activating enzyme 7##DQ893307|UBA7|7318|ubiquitin-like modifier activating enzyme 7##DQ893707|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BC006378|UBA7|7318|ubiquitin-like modifier activating enzyme 7##NM_003335|UBA7|7318|ubiquitin-like modifier activating enzyme 7##L13852|UBA7|7318|ubiquitin-like modifier activating enzyme 7	0.99692	CTCF.p2:-1:0.997
chr15	81068903	81069018	reg1000323.p1	18.988	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	-80951	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	-81298	+	AK295763 TSC_hg19_v1_chr15_+_80733623	-335355	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	2761	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	213240	-	TSC_hg19_v1_chr15_+_81293344 NM_022566	224384	+	AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199##D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##NM_022566|MESDC1|59274|mesoderm development candidate 1	0.23601	CTCF.p2:12:0.236
chr7	101007355	101007468	reg1000199.p1	18.982	+	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	-1194	+	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	-42373	-	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-111845	-	BC002778 NM_138403	265164	-	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	451798	+	M74099 NM_181552	453470	+	NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1	0.998445	CTCF.p2:-19:0.998
chr18	13630274	13630398	reg1000188.p2	18.973	+	AF009426 AF009427 NM_004338 NM_181483	-9470	+	NM_001003674 NM_001003675	-18672	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-411551	+	TSC_hg19_v1_chr18_-_13726549 AK055618	96170	-	TSC_hg19_v1_chr18_-_13726582 AK309506 NM_001098801 NM_152352	96250	-	TSC_hg19_v1_chr18_+_13726671 AK296370 BC017816 BX647977 AK303842 BC005290 AK292561 AB007858 AF067791 NM_003799 AB020966 BC036798	96354	+	AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A##AK309506|FAM210A|125228|family with sequence similarity 210, member A##NM_001098801|FAM210A|125228|family with sequence similarity 210, member A##NM_152352|FAM210A|125228|family with sequence similarity 210, member A##AK296370|RNMT|8731|RNA (guanine-7-) methyltransferase##BC017816|RNMT|8731|RNA (guanine-7-) methyltransferase##BX647977|RNMT|8731|RNA (guanine-7-) methyltransferase##AK303842|RNMT|8731|RNA (guanine-7-) methyltransferase##BC005290|RNMT|8731|RNA (guanine-7-) methyltransferase##AK292561|RNMT|8731|RNA (guanine-7-) methyltransferase##AB007858|RNMT|8731|RNA (guanine-7-) methyltransferase##AF067791|RNMT|8731|RNA (guanine-7-) methyltransferase##NM_003799|RNMT|8731|RNA (guanine-7-) methyltransferase##AB020966|RNMT|8731|RNA (guanine-7-) methyltransferase##BC036798|RNMT|8731|RNA (guanine-7-) methyltransferase	0.625228	CTCF.p2:19:0.625
chr10	88699270	88699380	reg1000220.p1	18.971	+	TSC_hg19_v1_chr10_+_88516526 NM_004329 BC028383 AK291764 Z22535	-182838	+	AK304760 TSC_hg19_v1_chr10_+_88428267 AK300692 AK297871 NM_001080116 AJ133766 BC010929 NM_001080114 NM_001080115 NM_001171611 NM_007078 AB014513 AF276807 AF276808 AF276809 AJ133767 AJ133768	-270970	+	TSC_hg19_v1_chr10_+_88428170 NM_001171610	-271139	+	TSC_hg19_v1_chr10_-_88717330 BC072456 AK304727 AK023527 AK293822 BC094744 BC064415 AK308401 NM_024756	18046	-	NM_003087 AK223367 AK311652 BC014098 AK312141 AF017256 AF411524 EU019993 AF010126 DQ892334 DQ892505 DQ895719 EU176715 AB464279 CR541788 CR541790	19045	+	NM_006829 TSC_hg19_v1_chr10_+_88728238 AK304688 AK312031 BC004471 D45370	28903	+	NM_004329|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC028383|BMPR1A|657|bone morphogenetic protein receptor, type IA##AK291764|BMPR1A|657|bone morphogenetic protein receptor, type IA##Z22535|BMPR1A|657|bone morphogenetic protein receptor, type IA##AK304760|LDB3|11155|LIM domain binding 3##AK300692|LDB3|11155|LIM domain binding 3##AK297871|LDB3|11155|LIM domain binding 3##NM_001080116|LDB3|11155|LIM domain binding 3##AJ133766|LDB3|11155|LIM domain binding 3##BC010929|LDB3|11155|LIM domain binding 3##NM_001080114|LDB3|11155|LIM domain binding 3##NM_001080115|LDB3|11155|LIM domain binding 3##NM_001171611|LDB3|11155|LIM domain binding 3##NM_007078|LDB3|11155|LIM domain binding 3##AB014513|LDB3|11155|LIM domain binding 3##AF276807|LDB3|11155|LIM domain binding 3##AF276808|LDB3|11155|LIM domain binding 3##AF276809|LDB3|11155|LIM domain binding 3##AJ133767|LDB3|11155|LIM domain binding 3##AJ133768|LDB3|11155|LIM domain binding 3##NM_001171610|LDB3|11155|LIM domain binding 3##BC072456|MMRN2|79812|multimerin 2##AK304727|MMRN2|79812|multimerin 2##AK023527|MMRN2|79812|multimerin 2##AK293822|MMRN2|79812|multimerin 2##BC094744|MMRN2|79812|multimerin 2##BC064415|MMRN2|79812|multimerin 2##AK308401|MMRN2|79812|multimerin 2##NM_024756|MMRN2|79812|multimerin 2##NM_003087|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK223367|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##BC014098|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK312141|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF017256|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF411524|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU019993|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF010126|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892334|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892505|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ895719|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU176715|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541788|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541790|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##NM_006829|C10orf116|10974|chromosome 10 open reading frame 116##AK312031|C10orf116|10974|chromosome 10 open reading frame 116##BC004471|C10orf116|10974|chromosome 10 open reading frame 116##D45370|C10orf116|10974|chromosome 10 open reading frame 116	0.963742	CTCF.p2:29:0.936
chr17	39819043	39819173	reg1000192.p1	18.968	+	AB528302 DQ891101 DQ894283 BC072018 BC072019 BC011901 X62571 BC000159 BC056421 AK304373 AK095342 NM_000422	-38287	-	S79867 DQ891307 DQ896818 AF061812 BC039169 AK290853 AK309296 AK309278 NM_005557	-50100	-	BT007186 AB527765 DQ890733 DQ892997 DQ893905 BC042437 BC002690 BC019097 BC094830 AK309280 NM_000526	-75993	-	NM_005801 TSC_hg19_v1_chr17_+_39845138 AL050005 AK311862	26025	+	AK311209 TSC_hg19_v1_chr17_+_39845141	26033	+	TSC_hg19_v1_chr17_+_39845142 BC005118 L26247 AF083441 BC008710 AF100737 AJ012375 DQ896700 EU176404 BT006645 CR457051	26108	+	DQ891101|KRT17|3872|keratin 17##DQ894283|KRT17|3872|keratin 17##BC072018|KRT17|3872|keratin 17##BC072019|KRT17|3872|keratin 17##BC011901|KRT17|3872|keratin 17##X62571|KRT17|3872|keratin 17##BC000159|KRT17|3872|keratin 17##BC056421|KRT17|3872|keratin 17##AK304373|KRT17|3872|keratin 17##AK095342|KRT17|3872|keratin 17##NM_000422|KRT17|3872|keratin 17##S79867|KRT16|3868|keratin 16##DQ891307|KRT16|3868|keratin 16##DQ896818|KRT16|3868|keratin 16##AF061812|KRT16|3868|keratin 16##BC039169|KRT16|3868|keratin 16##AK290853|KRT16|3868|keratin 16##NM_005557|KRT16|3868|keratin 16##BT007186|KRT14|3861|keratin 14##DQ890733|KRT14|3861|keratin 14##DQ892997|KRT14|3861|keratin 14##DQ893905|KRT14|3861|keratin 14##BC042437|KRT14|3861|keratin 14##BC002690|KRT14|3861|keratin 14##BC019097|KRT14|3861|keratin 14##BC094830|KRT14|3861|keratin 14##NM_000526|KRT14|3861|keratin 14##NM_005801|EIF1|10209|eukaryotic translation initiation factor 1##AL050005|EIF1|10209|eukaryotic translation initiation factor 1##AK311862|EIF1|10209|eukaryotic translation initiation factor 1##AK311209|EIF1|10209|eukaryotic translation initiation factor 1##BC005118|EIF1|10209|eukaryotic translation initiation factor 1##L26247|EIF1|10209|eukaryotic translation initiation factor 1##AF083441|EIF1|10209|eukaryotic translation initiation factor 1##BC008710|EIF1|10209|eukaryotic translation initiation factor 1##AF100737|EIF1|10209|eukaryotic translation initiation factor 1##AJ012375|EIF1|10209|eukaryotic translation initiation factor 1##DQ896700|EIF1|10209|eukaryotic translation initiation factor 1##EU176404|EIF1|10209|eukaryotic translation initiation factor 1##BT006645|EIF1|10209|eukaryotic translation initiation factor 1##CR457051|EIF1|10209|eukaryotic translation initiation factor 1	1.988815	CTCF.p2:30:0.999	CTCF.p2:-31:0.990
chr22	46402318	46402455	reg1000369.p1	18.968	+	AF416743 NM_058238 TSC_hg19_v1_chr22_-_46373045	-29357	-	CR456568 TSC_hg19_v1_chr22_+_46067931 AK095309 CR457381 DQ893240 DQ896570	-334469	+	AK025734 TSC_hg19_v1_chr22_+_46067746 AF119662 BC007508	-334630	+	TSC_hg19_v1_chr22_+_46449736 BC036832	47338	+	AB528792 AK001807 NM_018280 TSC_hg19_v1_chr22_-_46450052	47626	-	NM_001001928 NM_005036 AY258330 TSC_hg19_v1_chr22_+_46546555 AY258328	144144	+	AF416743|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_058238|WNT7B|7477|wingless-type MMTV integration site family, member 7B##CR456568|ATXN10|25814|ataxin 10##AK095309|ATXN10|25814|ataxin 10##CR457381|ATXN10|25814|ataxin 10##DQ893240|ATXN10|25814|ataxin 10##DQ896570|ATXN10|25814|ataxin 10##AK025734|ATXN10|25814|ataxin 10##AF119662|ATXN10|25814|ataxin 10##BC007508|ATXN10|25814|ataxin 10##AK001807|C22orf26|55267|chromosome 22 open reading frame 26##NM_018280|C22orf26|55267|chromosome 22 open reading frame 26##NM_001001928|PPARA|5465|peroxisome proliferator-activated receptor alpha##NM_005036|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258330|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258328|PPARA|5465|peroxisome proliferator-activated receptor alpha	0.999854	CTCF.p2:9:1.000
chr6	144426180	144426305	reg1000312.p1	18.961	+	NM_031287 TSC_hg19_v1_chr6_-_144416757	-9480	-	AB528231 AM393071 BC000198 TSC_hg19_v1_chr6_-_144416703 AK312079 AK074417	-9571	-	EF100438 EF100439 EF100440 EF100441 EF100442 EF100443 EF100444 EF100445 TSC_hg19_v1_chr6_-_144385724 NM_001080951 NM_001080955	-40552	-	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	45479	+	TSC_hg19_v1_chr6_+_144607461 AK292506	181238	+	NM_007124 X69086	186676	+	NM_031287|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AM393071|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##BC000198|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK312079|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK074417|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##EF100438|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100439|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100440|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100441|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100442|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100443|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100444|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100445|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080951|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080955|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11##AK292506|UTRN|7402|utrophin##NM_007124|UTRN|7402|utrophin##X69086|UTRN|7402|utrophin	0.555691	CTCF.p2:-21:0.556
chr12	6532813	6532978	reg1000247.p1	18.948	+	TSC_hg19_v1_chr12_+_6493333 AK095418 BC026262 AK027080 L04270 NM_002342 AB527559 DQ891995 DQ895185 CU693188	-39523	+	AK304379 NM_001159575	-46373	-	NM_001038	-47991	-	AK315732 NM_001242 BC012160 M63928 DQ892296 EU176659 AB590221 CU680244	21251	+	NM_018009 TSC_hg19_v1_chr12_+_6561272 BC015017 AK223163 AK001005 AK002056 AK222956 AK098035 HQ258015	28399	+	TSC_hg19_v1_chr12_-_6579844 AF060538 BC023286 AK289498 AK296294 AK303137 AK309184 NM_014231 NM_016830 NM_199245	46919	-	AK095418|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##BC026262|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK027080|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##L04270|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##NM_002342|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ891995|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ895185|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK304379|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001159575|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001038|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##AK315732|CD27|939|CD27 molecule##NM_001242|CD27|939|CD27 molecule##BC012160|CD27|939|CD27 molecule##M63928|CD27|939|CD27 molecule##DQ892296|CD27|939|CD27 molecule##EU176659|CD27|939|CD27 molecule##NM_018009|TAPBPL|55080|TAP binding protein-like##BC015017|TAPBPL|55080|TAP binding protein-like##AK223163|TAPBPL|55080|TAP binding protein-like##AK001005|TAPBPL|55080|TAP binding protein-like##AK002056|TAPBPL|55080|TAP binding protein-like##AK222956|TAPBPL|55080|TAP binding protein-like##AK098035|TAPBPL|55080|TAP binding protein-like##HQ258015|TAPBPL|55080|TAP binding protein-like##AF060538|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC023286|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK289498|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK296294|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK303137|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK309184|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_014231|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_016830|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_199245|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)	0.999159	CTCF.p2:-10:0.999
chr1	27721984	27722117	reg1000330.p1	18.943	+	BC032702 NM_005281 TSC_hg19_v1_chr1_+_27719158 AK291185 AK314868	-2884	+	BC137466 AY358761 NM_207397	-12258	-	AY358081 CR456808 DQ892028 DQ895220 AK309540 AK075140 AK309576 BC020731 NM_003665 NM_173452 AY358283	-20735	-	BC001524 BC001855 AK024540 TSC_hg19_v1_chr1_-_27732180 AY007122	10134	-	TSC_hg19_v1_chr1_-_27816621 AK303011 BC032724 BC050093 BC040943	94550	-	TSC_hg19_v1_chr1_-_27816670 BC012329	94621	-	BC032702|GPR3|2827|G protein-coupled receptor 3##NM_005281|GPR3|2827|G protein-coupled receptor 3##AK291185|GPR3|2827|G protein-coupled receptor 3##AK314868|GPR3|2827|G protein-coupled receptor 3##BC137466|CD164L2|388611|CD164 sialomucin-like 2##AY358761|CD164L2|388611|CD164 sialomucin-like 2##NM_207397|CD164L2|388611|CD164 sialomucin-like 2##AY358081|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##CR456808|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##DQ892028|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##DQ895220|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AK309540|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AK075140|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##BC020731|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_003665|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_173452|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AY358283|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##BC001524|WASF2|10163|WAS protein family, member 2##BC001855|WASF2|10163|WAS protein family, member 2##AK024540|WASF2|10163|WAS protein family, member 2##AY007122|WASF2|10163|WAS protein family, member 2##AK303011|WASF2|10163|WAS protein family, member 2##BC032724|WASF2|10163|WAS protein family, member 2##BC040943|WASF2|10163|WAS protein family, member 2##BC012329|WASF2|10163|WAS protein family, member 2	0.999936	CTCF.p2:21:1.000
chr17	38511364	38511502	reg1000400.p1	18.943	+	NM_001024809	-13163	+	TSC_hg19_v1_chr17_+_38474548 AK130192	-36886	+	TSC_hg19_v1_chr17_+_38474521 AK292205 FJ487576	-36909	+	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	9513	-	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	62691	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	88386	+	NM_001024809|RARA|5914|retinoic acid receptor, alpha##AK130192|RARA|5914|retinoic acid receptor, alpha##AK292205|RARA|5914|retinoic acid receptor, alpha##FJ487576|RARA|5914|retinoic acid receptor, alpha##AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4	0.569627	CTCF.p2:16:0.570
chr18	45275627	45275753	reg1000200.p1	18.939	+	TSC_hg19_v1_chr18_-_44702736 NM_016097	-572940	-	TSC_hg19_v1_chr18_-_44702734 AK027108	-572957	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	-573001	-	BC014840 NM_005901	181235	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	181525	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	181799	-	NM_016097|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2	1.965698	CTCF.p2:-36:0.967	CTCF.p2:36:0.999
chr16	56736066	56736185	reg1000272.p1	18.935	+	TSC_hg19_v1_chr16_+_56716381 AK311284 AK311373 NM_005952 BC032131 BC032338 BC018190 BC053882 BC029916 X76717 AB528765 S68956	-19710	+	BC008408 NM_005951 BC059780 X64177 BC146930 BC146934 BT007171 S68948	-32365	+	AB528657 S68954 BC035287 BC048334 BC005311 BC020757 NM_005950 TSC_hg19_v1_chr16_-_56701976	-34181	-	NM_014669 TSC_hg19_v1_chr16_+_56764040	27906	+	TSC_hg19_v1_chr16_+_56764089 D42085 AF086282 BC034346 AK292262	27960	+	NM_001242795 AK056637 TSC_hg19_v1_chr16_+_56815740	79610	+	NM_005952|MT1X|4501|metallothionein 1X##BC032131|MT1X|4501|metallothionein 1X##BC032338|MT1X|4501|metallothionein 1X##BC018190|MT1X|4501|metallothionein 1X##BC053882|MT1X|4501|metallothionein 1X##BC029916|MT1X|4501|metallothionein 1X##X76717|MT1X|4501|metallothionein 1X##S68956|MT1X|4501|metallothionein 1X##BC008408|MT1H|4496|metallothionein 1H##NM_005951|MT1H|4496|metallothionein 1H##BC059780|MT1H|4496|metallothionein 1H##X64177|MT1H|4496|metallothionein 1H##BC146930|MT1H|4496|metallothionein 1H##BC146934|MT1H|4496|metallothionein 1H##BT007171|MT1H|4496|metallothionein 1H##S68948|MT1H|4496|metallothionein 1H##S68954|MT1G|4495|metallothionein 1G##BC035287|MT1G|4495|metallothionein 1G##BC005311|MT1G|4495|metallothionein 1G##BC020757|MT1G|4495|metallothionein 1G##NM_005950|MT1G|4495|metallothionein 1G##NM_014669|NUP93|9688|nucleoporin 93kDa##D42085|NUP93|9688|nucleoporin 93kDa##AF086282|NUP93|9688|nucleoporin 93kDa##BC034346|NUP93|9688|nucleoporin 93kDa##AK292262|NUP93|9688|nucleoporin 93kDa##NM_001242795|NUP93|9688|nucleoporin 93kDa##AK056637|NUP93|9688|nucleoporin 93kDa	0.977073	CTCF.p2:9:0.977
chr10	81903607	81903723	reg1000180.p1	18.914	+	TSC_hg19_v1_chr10_+_81892497 HQ258029 EU446996	-11160	+	BC117332 BC117334 TSC_hg19_v1_chr10_+_81892485	-11208	+	BC066348 BC090922 NM_001012973	-11408	+	BC007564 TSC_hg19_v1_chr10_-_81965258 L19605 AB209770	61528	-	TSC_hg19_v1_chr10_-_81965287 AK298362	61616	-	TSC_hg19_v1_chr10_-_81965288 AK222918	61624	-	HQ258029|PLAC9|219348|placenta-specific 9##EU446996|PLAC9|219348|placenta-specific 9##BC117332|PLAC9|219348|placenta-specific 9##BC117334|PLAC9|219348|placenta-specific 9##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9##BC007564|ANXA11|311|annexin A11##L19605|ANXA11|311|annexin A11##AB209770|ANXA11|311|annexin A11##AK298362|ANXA11|311|annexin A11##AK222918|ANXA11|311|annexin A11	0.997418	CTCF.p2:-7:0.997
chr22	37934942	37935074	reg1000347.p1	18.908	+	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	-19701	-	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	-52663	-	TSC_hg19_v1_chr22_-_37823515 NM_052906	-111480	-	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	21465	+	M87842 BC059782 NM_006498 CR456512	40992	-	TSC_hg19_v1_chr22_+_38004480 NM_001001560 NM_001001561 NM_001172687 NM_013365 AK075256	69554	+	AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10##CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2##NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M87842|LGALS2|3957|lectin, galactoside-binding, soluble, 2##BC059782|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_006498|LGALS2|3957|lectin, galactoside-binding, soluble, 2##CR456512|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_001001560|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001001561|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001172687|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_013365|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK075256|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1	0.346427	CTCF.p2:37:0.267
chr5	133375365	133375489	reg1000158.p1	18.900	+	AK095989 NM_003374	-34604	-	TSC_hg19_v1_chr5_-_133340431 L06132	-34997	-	TSC_hg19_v1_chr5_-_133340397 BC071168 AK293639	-35026	-	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	75092	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	75934	+	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	137196	-	AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##L06132|VDAC1|7416|voltage-dependent anion channel 1##BC071168|VDAC1|7416|voltage-dependent anion channel 1##AK293639|VDAC1|7416|voltage-dependent anion channel 1##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1	1.930638	CTCF.p2:-14:0.997	CTCF.p2:-81:0.761
chr6	90319899	90320033	reg1000415.p1	18.900	+	NM_001242814 AK096867	-43341	+	NM_001242811 AK295731	-47889	+	TSC_hg19_v1_chr6_+_90142897 NM_001242809 NM_001242813 NM_014942 AK307792 BC042173 AB023174	-177031	+	EU831412 EU831505 TSC_hg19_v1_chr6_-_90348462 AL122090 BC104668 AK311948 BC009782 AK024783 NM_020466	28497	-	TSC_hg19_v1_chr6_-_90529463 AF503925 NM_014611	209479	-	TSC_hg19_v1_chr6_-_90529484 AK124025	209540	-	NM_001242814|ANKRD6|22881|ankyrin repeat domain 6##AK096867|ANKRD6|22881|ankyrin repeat domain 6##NM_001242811|ANKRD6|22881|ankyrin repeat domain 6##AK295731|ANKRD6|22881|ankyrin repeat domain 6##NM_001242809|ANKRD6|22881|ankyrin repeat domain 6##NM_001242813|ANKRD6|22881|ankyrin repeat domain 6##NM_014942|ANKRD6|22881|ankyrin repeat domain 6##AK307792|ANKRD6|22881|ankyrin repeat domain 6##BC042173|ANKRD6|22881|ankyrin repeat domain 6##AB023174|ANKRD6|22881|ankyrin repeat domain 6##EU831412|LYRM2|57226|LYR motif containing 2##EU831505|LYRM2|57226|LYR motif containing 2##AL122090|LYRM2|57226|LYR motif containing 2##BC104668|LYRM2|57226|LYR motif containing 2##AK311948|LYRM2|57226|LYR motif containing 2##BC009782|LYRM2|57226|LYR motif containing 2##AK024783|LYRM2|57226|LYR motif containing 2##NM_020466|LYRM2|57226|LYR motif containing 2##AF503925|MDN1|23195|MDN1, midasin homolog (yeast)##NM_014611|MDN1|23195|MDN1, midasin homolog (yeast)##AK124025|MDN1|23195|MDN1, midasin homolog (yeast)	0.99943	CTCF.p2:8:0.999
chr1	28184682	28184806	reg1000340.p1	18.893	+	AF126488 AX775985 TSC_hg19_v1_chr1_+_28157335 AK313814 AB464098 U14575	-27403	+	TSC_hg19_v1_chr1_+_28157334 AF061958 AK292077 AK297771 AK304619 NM_002713 NM_138558 AK307570 BC093017	-27416	+	NM_014110 TSC_hg19_v1_chr1_+_28157314	-27458	+	CR749321 BC132692 BC133049 NM_001039477 NM_001105556 NM_004848 TSC_hg19_v1_chr1_+_28199054 AK303141 HQ258751 BC031655 AK303090	14328	+	CR450348 DQ892352 DQ895821 TSC_hg19_v1_chr1_-_28241083 J05249 BC001630 AK300691 AK312956 AK296898 AK298759 BC012157	56305	-	TSC_hg19_v1_chr1_-_28241258 BC021257 NM_002946	56520	-	AF126488|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AX775985|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK313814|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##U14575|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AF061958|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK292077|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK297771|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK304619|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_002713|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_138558|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK307570|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##BC093017|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_014110|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##CR749321|C1orf38|9473|chromosome 1 open reading frame 38##BC132692|C1orf38|9473|chromosome 1 open reading frame 38##BC133049|C1orf38|9473|chromosome 1 open reading frame 38##NM_001039477|C1orf38|9473|chromosome 1 open reading frame 38##NM_001105556|C1orf38|9473|chromosome 1 open reading frame 38##NM_004848|C1orf38|9473|chromosome 1 open reading frame 38##AK303141|C1orf38|9473|chromosome 1 open reading frame 38##HQ258751|C1orf38|9473|chromosome 1 open reading frame 38##BC031655|C1orf38|9473|chromosome 1 open reading frame 38##AK303090|C1orf38|9473|chromosome 1 open reading frame 38##CR450348|RPA2|6118|replication protein A2, 32kDa##DQ892352|RPA2|6118|replication protein A2, 32kDa##DQ895821|RPA2|6118|replication protein A2, 32kDa##J05249|RPA2|6118|replication protein A2, 32kDa##BC001630|RPA2|6118|replication protein A2, 32kDa##AK300691|RPA2|6118|replication protein A2, 32kDa##AK312956|RPA2|6118|replication protein A2, 32kDa##AK298759|RPA2|6118|replication protein A2, 32kDa##BC012157|RPA2|6118|replication protein A2, 32kDa##BC021257|RPA2|6118|replication protein A2, 32kDa##NM_002946|RPA2|6118|replication protein A2, 32kDa	0.0	
chr12	58299227	58299353	reg1000215.p1	18.891	+	NM_005730	-58544	-	AK291289 TSC_hg19_v1_chr12_-_58240508 AK312413 AK311070 AF000152	-58778	-	TSC_hg19_v1_chr12_-_58240486 BC018922 AK310183	-58811	-	TSC_hg19_v1_chr12_+_58335326 BC033881 AF078164	36046	+	BC012776 NM_033276 BC115381 BC115382 TSC_hg19_v1_chr12_+_58335454	36170	+	AK301162 AY358295 NM_001136051	1014025	-	NM_005730|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##AK291289|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##AK312413|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##AF000152|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##BC018922|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##AK310183|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##BC033881|XRCC6BP1|91419|XRCC6 binding protein 1##AF078164|XRCC6BP1|91419|XRCC6 binding protein 1##BC012776|XRCC6BP1|91419|XRCC6 binding protein 1##NM_033276|XRCC6BP1|91419|XRCC6 binding protein 1##BC115381|XRCC6BP1|91419|XRCC6 binding protein 1##BC115382|XRCC6BP1|91419|XRCC6 binding protein 1##AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	1.454456	CTCF.p2:-18:0.912	CTCF.p2:29:0.543
chr2	47214275	47214419	reg1000419.p1	18.890	+	TSC_hg19_v1_chr2_-_47168913 NM_001171508 NM_001171511	-45400	-	AK292127 TSC_hg19_v1_chr2_-_47168875 AK293889	-45474	-	TSC_hg19_v1_chr2_+_47168400 BC047709 BC111487	-45944	+	AK097491 NM_001163561 NM_173649	168123	-	TSC_hg19_v1_chr2_-_47403624 M19311 BC003354 BC006464	189279	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	189303	-	NM_001171508|MCFD2|90411|multiple coagulation factor deficiency 2##NM_001171511|MCFD2|90411|multiple coagulation factor deficiency 2##AK292127|MCFD2|90411|multiple coagulation factor deficiency 2##AK293889|MCFD2|90411|multiple coagulation factor deficiency 2##BC111487|TTC7A|57217|tetratricopeptide repeat domain 7A##AK097491|C2orf61|285051|chromosome 2 open reading frame 61##NM_001163561|C2orf61|285051|chromosome 2 open reading frame 61##NM_173649|C2orf61|285051|chromosome 2 open reading frame 61##M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	1.991741	CTCF.p2:-23:0.999	CTCF.p2:40:0.992
chr10	11767323	11767438	reg1000201.p2	18.889	+	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	-113744	-	NM_001080491	-193107	-	TSC_hg19_v1_chr10_+_11207490 AK295511	-559888	+	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	17018	+	TSC_hg19_v1_chr10_+_11865354 BC017269 BC048800 NM_153256	97978	+	AK056703 TSC_hg19_v1_chr10_-_11936707	169322	-	AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK295511|CELF2|10659|CUGBP, Elav-like family member 2##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC017269|C10orf47|254427|chromosome 10 open reading frame 47##BC048800|C10orf47|254427|chromosome 10 open reading frame 47##NM_153256|C10orf47|254427|chromosome 10 open reading frame 47##AK056703|LOC219731|219731|uncharacterized LOC219731	0.319875	CTCF.p2:23:0.320
chr10	82265427	82265562	reg1000403.p1	18.886	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-51390	+	TSC_hg19_v1_chr10_+_82214071 AF311903	-51423	+	AK074558 AK295321 AL136638 TSC_hg19_v1_chr10_+_82214066	-51426	+	AK123885 NM_207372	32163	+	AK123978 NM_001145719	35080	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	1369588	+	BC002920|TSPAN14|81619|tetraspanin 14##AF311903|TSPAN14|81619|tetraspanin 14##AK074558|TSPAN14|81619|tetraspanin 14##AK295321|TSPAN14|81619|tetraspanin 14##AL136638|TSPAN14|81619|tetraspanin 14##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3	0.013799	
chr14	54006346	54006494	reg1000358.p1	18.881	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-386370	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-386452	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-386547	-	NM_130851	414849	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	417113	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	857301	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.995742	CTCF.p2:-23:0.996
chr11	8247244	8247385	reg1000490.p1	18.878	+	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	-56751	-	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-144515	+	NM_003320 U82467	-187135	+	BC069752 BC069793 M26682 NM_002315	38038	-	AK093251 AX748014 BC031231 NM_030906	368143	-	AK293193 TSC_hg19_v1_chr11_-_8615705	368389	-	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##NM_003320|TUB|7275|tubby homolog (mouse)##U82467|TUB|7275|tubby homolog (mouse)##BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33##AK293193|STK33|65975|serine/threonine kinase 33	0.999373	CTCF.p2:-10:0.999
chr10	76995774	76995908	reg1000260.p1	18.876	+	TSC_hg19_v1_chr10_-_76995794 CU690500 BC023663 AK302283 AK074421 AY358476 BC047774 NM_144589 AK290452	-70	-	BC012883 L08666 TSC_hg19_v1_chr10_+_76970608	-25231	+	TSC_hg19_v1_chr10_+_76970563 BC000165 BC072407 AK315919 AK296635	-25287	+	TSC_hg19_v1_chr10_-_77159861 AK092897 AX747796	164104	-	AK127647 TSC_hg19_v1_chr10_-_77160688	164829	-	TSC_hg19_v1_chr10_-_77161142 CU680472 EU446545 BC013011 BC021165	165369	-	BC023663|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK302283|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK074421|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AY358476|COMTD1|118881|catechol-O-methyltransferase domain containing 1##BC047774|COMTD1|118881|catechol-O-methyltransferase domain containing 1##NM_144589|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK290452|COMTD1|118881|catechol-O-methyltransferase domain containing 1##BC012883|VDAC2|7417|voltage-dependent anion channel 2##L08666|VDAC2|7417|voltage-dependent anion channel 2##BC000165|VDAC2|7417|voltage-dependent anion channel 2##BC072407|VDAC2|7417|voltage-dependent anion channel 2##AK315919|VDAC2|7417|voltage-dependent anion channel 2##AK296635|VDAC2|7417|voltage-dependent anion channel 2##AK092897|ZNF503|84858|zinc finger protein 503##AK127647|ZNF503|84858|zinc finger protein 503##EU446545|ZNF503|84858|zinc finger protein 503##BC013011|ZNF503|84858|zinc finger protein 503##BC021165|ZNF503|84858|zinc finger protein 503	0.936864	CTCF.p2:35:0.841
chr6	37759331	37759479	reg1000464.p1	18.875	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	-93699	-	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-291709	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-291753	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	27885	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	28285	+	BC101354 BC101355 BC101356 BC101357 AK057507 NM_001172418 NM_152733	804397	-	AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3##BC101354|BTBD9|114781|BTB (POZ) domain containing 9##BC101355|BTBD9|114781|BTB (POZ) domain containing 9##BC101356|BTBD9|114781|BTB (POZ) domain containing 9##BC101357|BTBD9|114781|BTB (POZ) domain containing 9##AK057507|BTBD9|114781|BTB (POZ) domain containing 9##NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9##NM_152733|BTBD9|114781|BTB (POZ) domain containing 9	0.866555	CTCF.p2:8:0.867
chr16	23812874	23812964	reg1000124.p2	18.868	+	AF146019 NM_022097 AK313062	-46900	+	AK131280 NM_033266	-88099	-	GQ129249 GQ129250 TSC_hg19_v1_chr16_-_23724544 AK309313 AK310834 EF560720 EF560739 AB047079	-88382	-	TSC_hg19_v1_chr16_+_23847303 NM_002738 NM_212535	34375	+	TSC_hg19_v1_chr16_+_23847321 BC036472	34413	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	34476	+	AF146019|CHP2|63928|calcineurin B homologous protein 2##NM_022097|CHP2|63928|calcineurin B homologous protein 2##AK313062|CHP2|63928|calcineurin B homologous protein 2##AK131280|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##NM_033266|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##GQ129249|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##GQ129250|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AK309313|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AK310834|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##EF560720|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##EF560739|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AB047079|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##NM_002738|PRKCB|5579|protein kinase C, beta##NM_212535|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta	0.997647	CTCF.p2:4:0.998
chr11	3113123	3113266	reg1000378.p1	18.865	+	BT009913 CU678270 DQ890773 AK308005 TSC_hg19_v1_chr11_-_3078625 AB208814 AF288206 AF288207 AK222614 AK296763 AK131221 AK096313 AK295371 AK298514 AK302644 BX647906 AK289432 BC002880 NM_001014437 NM_001194997 NM_001751 NM_139273	-34556	-	TSC_hg19_v1_chr11_-_3013610 NM_005969 U77456 AK312599	-99595	-	AK316324 TSC_hg19_v1_chr11_-_3013560	-99639	-	AK301003 TSC_hg19_v1_chr11_-_3147850	34649	-	TSC_hg19_v1_chr11_-_3186504 BC032646 BC039579 AF392453 AL136918	73295	-	TSC_hg19_v1_chr11_-_3186518 AK303205	73318	-	BT009913|CARS|833|cysteinyl-tRNA synthetase##DQ890773|CARS|833|cysteinyl-tRNA synthetase##AK308005|CARS|833|cysteinyl-tRNA synthetase##AB208814|CARS|833|cysteinyl-tRNA synthetase##AF288206|CARS|833|cysteinyl-tRNA synthetase##AF288207|CARS|833|cysteinyl-tRNA synthetase##AK222614|CARS|833|cysteinyl-tRNA synthetase##AK296763|CARS|833|cysteinyl-tRNA synthetase##AK131221|CARS|833|cysteinyl-tRNA synthetase##AK096313|CARS|833|cysteinyl-tRNA synthetase##AK295371|CARS|833|cysteinyl-tRNA synthetase##AK298514|CARS|833|cysteinyl-tRNA synthetase##AK302644|CARS|833|cysteinyl-tRNA synthetase##BX647906|CARS|833|cysteinyl-tRNA synthetase##AK289432|CARS|833|cysteinyl-tRNA synthetase##BC002880|CARS|833|cysteinyl-tRNA synthetase##NM_001014437|CARS|833|cysteinyl-tRNA synthetase##NM_001194997|CARS|833|cysteinyl-tRNA synthetase##NM_001751|CARS|833|cysteinyl-tRNA synthetase##NM_139273|CARS|833|cysteinyl-tRNA synthetase##NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4##U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK301003|OSBPL5|114879|oxysterol binding protein-like 5##BC032646|OSBPL5|114879|oxysterol binding protein-like 5##BC039579|OSBPL5|114879|oxysterol binding protein-like 5##AF392453|OSBPL5|114879|oxysterol binding protein-like 5##AL136918|OSBPL5|114879|oxysterol binding protein-like 5##AK303205|OSBPL5|114879|oxysterol binding protein-like 5	1.033005	CTCF.p2:-7:1.000
chr11	44560134	44560266	reg1000442.p1	18.860	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-228524	-	NM_000401 BX648142	-442441	+	BC068545 TSC_hg19_v1_chr11_+_44117272 U72263 BC013050	-442929	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	26965	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	27027	+	NM_130783	225775	+	AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_000401|EXT2|2132|exostosin 2##BX648142|EXT2|2132|exostosin 2##BC068545|EXT2|2132|exostosin 2##U72263|EXT2|2132|exostosin 2##BC013050|EXT2|2132|exostosin 2##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_130783|TSPAN18|90139|tetraspanin 18	0.937097	CTCF.p2:4:0.937
chr17	47647540	47647623	reg1000208.p1	18.858	+	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	-74893	+	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	-155333	-	BC095460 TSC_hg19_v1_chr17_-_47492215	-155366	-	TSC_hg19_v1_chr17_+_47653192 AL834282 NM_007225	5655	+	TSC_hg19_v1_chr17_+_47653475 BC022541 AK308928 AY358526 AB385434	5946	+	TSC_hg19_v1_chr17_-_47755471 BC003385 AK222589 AK312691 AJ000644 AK303268 AK316366 BC001269 AK293587 AK300616 NM_001007226 NM_001007227 NM_001007228 NM_001007229 NM_001007230 NM_003563	107851	-	AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##BC095460|PHB|5245|prohibitin##AL834282|NXPH3|11248|neurexophilin 3##NM_007225|NXPH3|11248|neurexophilin 3##BC022541|NXPH3|11248|neurexophilin 3##AK308928|NXPH3|11248|neurexophilin 3##AY358526|NXPH3|11248|neurexophilin 3##BC003385|SPOP|8405|speckle-type POZ protein##AK222589|SPOP|8405|speckle-type POZ protein##AK312691|SPOP|8405|speckle-type POZ protein##AJ000644|SPOP|8405|speckle-type POZ protein##AK303268|SPOP|8405|speckle-type POZ protein##AK316366|SPOP|8405|speckle-type POZ protein##BC001269|SPOP|8405|speckle-type POZ protein##AK293587|SPOP|8405|speckle-type POZ protein##AK300616|SPOP|8405|speckle-type POZ protein##NM_001007226|SPOP|8405|speckle-type POZ protein##NM_001007227|SPOP|8405|speckle-type POZ protein##NM_001007228|SPOP|8405|speckle-type POZ protein##NM_001007229|SPOP|8405|speckle-type POZ protein##NM_001007230|SPOP|8405|speckle-type POZ protein##NM_003563|SPOP|8405|speckle-type POZ protein	0.99582	CTCF.p2:-34:0.996
chr1	16382686	16382814	reg1000367.p1	18.854	+	AK098217 NM_001165945	-7467	+	NM_000085 AK292335 BC020873 BC033806 Z30644	-12452	+	BC053869 NM_001042704 NM_004070 AK298285 AK225550 AK290814 S80315	-34297	+	AB463624 CU691488 AK094085 BC037394 TSC_hg19_v1_chr1_-_16400144 BC016848 NM_182623	17307	-	EU826606 DQ895231 EU176326 TSC_hg19_v1_chr1_-_16482565 M59371 BC037166 AK296788 NM_004431	99776	-	BC040640 NM_153213 AK091281 AX746893 AK297707	156384	-	AK098217|CLCNKB|1188|chloride channel Kb##NM_001165945|CLCNKB|1188|chloride channel Kb##NM_000085|CLCNKB|1188|chloride channel Kb##AK292335|CLCNKB|1188|chloride channel Kb##BC020873|CLCNKB|1188|chloride channel Kb##BC033806|CLCNKB|1188|chloride channel Kb##Z30644|CLCNKB|1188|chloride channel Kb##BC053869|CLCNKA|1187|chloride channel Ka##NM_001042704|CLCNKA|1187|chloride channel Ka##NM_004070|CLCNKA|1187|chloride channel Ka##AK298285|CLCNKA|1187|chloride channel Ka##AK225550|CLCNKA|1187|chloride channel Ka##AK290814|CLCNKA|1187|chloride channel Ka##S80315|CLCNKB|1188|chloride channel Kb##AK094085|FAM131C|348487|family with sequence similarity 131, member C##BC037394|FAM131C|348487|family with sequence similarity 131, member C##BC016848|FAM131C|348487|family with sequence similarity 131, member C##NM_182623|FAM131C|348487|family with sequence similarity 131, member C##EU826606|EPHA2|1969|EPH receptor A2##DQ895231|EPHA2|1969|EPH receptor A2##EU176326|EPHA2|1969|EPH receptor A2##M59371|EPHA2|1969|EPH receptor A2##BC037166|EPHA2|1969|EPH receptor A2##AK296788|EPHA2|1969|EPH receptor A2##NM_004431|EPHA2|1969|EPH receptor A2##BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19	0.05932	
chr19	15261351	15261480	reg1000531.p1	18.853	+	TSC_hg19_v1_chr19_-_15236518 U61263 BC011761 BC011722 NM_006844	-24879	-	BC000109 TSC_hg19_v1_chr19_-_15236004	-25427	-	BC126913 CU680024 CU680048 TSC_hg19_v1_chr19_-_15235944	-25569	-	TSC_hg19_v1_chr19_-_15311808 AB209447 NM_000435 U97669	50383	-	BC132958 BC132960 AK026061 NM_024794	81797	-	BC115002 NM_001142886	82397	-	U61263|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC011761|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC011722|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##NM_006844|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC000109|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC126913|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##AB209447|NOTCH3|4854|notch 3##NM_000435|NOTCH3|4854|notch 3##U97669|NOTCH3|4854|notch 3##BC132958|EPHX3|79852|epoxide hydrolase 3##BC132960|EPHX3|79852|epoxide hydrolase 3##AK026061|EPHX3|79852|epoxide hydrolase 3##NM_024794|EPHX3|79852|epoxide hydrolase 3##BC115002|EPHX3|79852|epoxide hydrolase 3##NM_001142886|EPHX3|79852|epoxide hydrolase 3	0.955797	CTCF.p2:6:0.956
chr8	52921125	52921264	reg1000240.p1	18.844	+	AK299452 TSC_hg19_v1_chr8_+_52812239	-108971	+	TSC_hg19_v1_chr8_-_52811724 NM_052937	-109467	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	-109592	-	BC026316 AB011107 AK311188 BC031075 NM_014682 BC025662	401126	-	BC130641 BC130643 BC144534 AY358213 NM_207413	556799	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	705792	-	NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC130641|FAM150A|389658|family with sequence similarity 150, member A##BC130643|FAM150A|389658|family with sequence similarity 150, member A##BC144534|FAM150A|389658|family with sequence similarity 150, member A##AY358213|FAM150A|389658|family with sequence similarity 150, member A##NM_207413|FAM150A|389658|family with sequence similarity 150, member A##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1	1.130398	CTCF.p2:23:0.997
chr20	39597498	39597620	reg1000214.p1	18.843	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-279682	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-2006570	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-2042491	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	59935	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	60105	+	TSC_hg19_v1_chr20_+_39765861 AB210028	168303	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.99899	CTCF.p2:-9:0.999
chr11	2552730	2552839	reg1000341.p1	18.837	+	TSC_hg19_v1_chr11_+_2466237 AF000571 NM_000218 EF010934 AB464057 AY114213 U86146	-86535	+	AJ270996 BC093787 BC093789 BC143351 BC143353 AF177473 NM_014555	-108527	-	AF125568 NM_005706	-129262	+	BC007733 TSC_hg19_v1_chr11_-_2560881	8063	-	AK123073 TSC_hg19_v1_chr11_-_2721223	168441	-	U22398 BC039188 NM_000076 NM_001122630 NM_001122631 TSC_hg19_v1_chr11_-_2907004 BC067842	354210	-	AF000571|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##NM_000218|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##EF010934|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AY114213|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##U86146|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AJ270996|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093787|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093789|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143351|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143353|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF177473|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##NM_014555|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF125568|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_005706|TSSC4|10078|tumor suppressing subtransferable candidate 4##AK123073|KCNQ1OT1|10984|KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)##U22398|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC039188|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_000076|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122630|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122631|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC067842|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)	0.998949	CTCF.p2:9:0.999
chr11	116976790	116976926	reg1000228.p1	18.831	+	BC128511 BC128510 NM_025164 BC121188 TSC_hg19_v1_chr11_-_116969081	-7825	-	X00566 TSC_hg19_v1_chr11_-_116708339 AX752114 AX752116 BC005380 NM_000039 AK292231 BC110286	-268503	-	TSC_hg19_v1_chr11_+_116700622 BC121081 BC134419 NM_000040 BC027977	-276234	+	TSC_hg19_v1_chr11_+_117015002 NM_001184746 NM_001184747 NM_001184748 NM_002572 AK292973 AK307366 BC000398 BC019301 BC039721 D63390 BC001774 DQ836738 DQ836739 DQ836740 DQ836741 DQ836742 DQ836743	38175	+	TSC_hg19_v1_chr11_+_117049458 AK292501	72699	+	TSC_hg19_v1_chr11_+_117049872 AF151799 BC114522 BC114959 AY358442 NM_001040455 AK292974	73034	+	BC128511|SIK3|23387|SIK family kinase 3##BC128510|SIK3|23387|SIK family kinase 3##NM_025164|SIK3|23387|SIK family kinase 3##BC121188|SIK3|23387|SIK family kinase 3##X00566|APOA1|335|apolipoprotein A-I##BC005380|APOA1|335|apolipoprotein A-I##NM_000039|APOA1|335|apolipoprotein A-I##AK292231|APOA1|335|apolipoprotein A-I##BC110286|APOA1|335|apolipoprotein A-I##BC121081|APOC3|345|apolipoprotein C-III##BC134419|APOC3|345|apolipoprotein C-III##NM_000040|APOC3|345|apolipoprotein C-III##BC027977|APOC3|345|apolipoprotein C-III##NM_001184746|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184747|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184748|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_002572|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292973|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK307366|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC000398|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC019301|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC039721|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##D63390|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC001774|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836738|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836739|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836740|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836741|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836742|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836743|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292501|SIDT2|51092|SID1 transmembrane family, member 2##AF151799|SIDT2|51092|SID1 transmembrane family, member 2##BC114522|SIDT2|51092|SID1 transmembrane family, member 2##BC114959|SIDT2|51092|SID1 transmembrane family, member 2##AY358442|SIDT2|51092|SID1 transmembrane family, member 2##NM_001040455|SIDT2|51092|SID1 transmembrane family, member 2##AK292974|SIDT2|51092|SID1 transmembrane family, member 2	0.07566	
chr6	40276566	40276680	reg1000233.p2	18.828	+	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-374409	-	AB527188 AJ224328 NM_005943	-381238	-	NM_015345 AL833083 BC128388	-515805	+	BC142616 AB033072 NM_020737 AK291474	278521	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	730326	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	733723	+	AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2	0.784518	CTCF.p2:-3:0.785
chr16	78005566	78005704	reg1000470.p1	18.819	+	TSC_hg19_v1_chr16_+_77822482 AK290153 BC033537 NM_020927 AB046796 CU689646	-183146	+	NM_001105663 NM_001243657 NM_001243660 NM_001243661 TSC_hg19_v1_chr16_+_77756410 AK296963 EU981826	-249202	+	AK293831 BC063283 NM_199355	-536665	-	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	50815	+	NM_001244755	57350	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	127820	+	AK290153|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##BC033537|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_020927|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AB046796|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_001105663|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243657|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243660|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243661|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK296963|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##EU981826|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase	0.99988	CTCF.p2:16:1.000
chr1	3481930	3482056	reg1000334.p1	18.816	+	TSC_hg19_v1_chr1_-_3447976 AB011539	-34001	-	AK310408 TSC_hg19_v1_chr1_+_3388187 AK296150	-93809	+	TSC_hg19_v1_chr1_+_3371228 NM_014448 AK095984	-110788	+	AB231860 NM_001409	46065	-	TSC_hg19_v1_chr1_+_3541565 NM_182752 AK096427	59571	+	AK298343 TSC_hg19_v1_chr1_+_3541608 AK289919 BC019034	59616	+	AB011539|MEGF6|1953|multiple EGF-like-domains 6##AK310408|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK296150|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##NM_014448|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK095984|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AB231860|MEGF6|1953|multiple EGF-like-domains 6##NM_001409|MEGF6|1953|multiple EGF-like-domains 6##NM_182752|TPRG1L|127262|tumor protein p63 regulated 1-like##AK096427|TPRG1L|127262|tumor protein p63 regulated 1-like##AK298343|TPRG1L|127262|tumor protein p63 regulated 1-like##AK289919|TPRG1L|127262|tumor protein p63 regulated 1-like##BC019034|TPRG1L|127262|tumor protein p63 regulated 1-like	0.997411	CTCF.p2:-16:0.997
chr17	6325435	6325566	reg1000427.p1	18.814	+	TSC_hg19_v1_chr17_+_5974408 BC009975	-351083	+	TSC_hg19_v1_chr17_+_5973700 AL833730 NM_015253	-351693	+	AK309645 TSC_hg19_v1_chr17_+_5972435 AK289603	-353070	+	DQ892260 DQ895462 AB593054 BC007994 BC012055 AF038437 AB593047 AB593042 AB593043 AB593050 AB593052 AK314558 AB593051 AK023970 AB593048 BX537907 AB593044 AB593045 AB593046 AB593049 AJ633677 AJ633678 AJ830742 AJ830743 AB593053 AB593055 BX647279 AF525970 NM_001033054 NM_001033055 NM_014336 DQ426860	13003	-	TSC_hg19_v1_chr17_+_6347774 NM_001195228 NM_019013 BC005004 AK225613 AK001353 AK225702 BC013966 AK001018	22263	+	TSC_hg19_v1_chr17_-_6459873 BC035799 BC128583 BC128584 AF334586 NM_001165966 NM_031220	134330	-	BC009975|WSCD1|23302|WSC domain containing 1##AL833730|WSCD1|23302|WSC domain containing 1##NM_015253|WSCD1|23302|WSC domain containing 1##AK309645|WSCD1|23302|WSC domain containing 1##AK289603|WSCD1|23302|WSC domain containing 1##DQ892260|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##DQ895462|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593054|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BC007994|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BC012055|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AF038437|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593047|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593042|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593043|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593050|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593052|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AK314558|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593051|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AK023970|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593048|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BX537907|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593044|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593045|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593046|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593049|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ633677|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ633678|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ830742|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ830743|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593053|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593055|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BX647279|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AF525970|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_001033054|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_001033055|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_014336|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_001195228|FAM64A|54478|family with sequence similarity 64, member A##NM_019013|FAM64A|54478|family with sequence similarity 64, member A##BC005004|FAM64A|54478|family with sequence similarity 64, member A##AK225613|FAM64A|54478|family with sequence similarity 64, member A##AK001353|FAM64A|54478|family with sequence similarity 64, member A##AK225702|FAM64A|54478|family with sequence similarity 64, member A##BC013966|FAM64A|54478|family with sequence similarity 64, member A##AK001018|FAM64A|54478|family with sequence similarity 64, member A##BC035799|PITPNM3|83394|PITPNM family member 3##BC128583|PITPNM3|83394|PITPNM family member 3##BC128584|PITPNM3|83394|PITPNM family member 3##AF334586|PITPNM3|83394|PITPNM family member 3##NM_001165966|PITPNM3|83394|PITPNM family member 3##NM_031220|PITPNM3|83394|PITPNM family member 3	0.999899	CTCF.p2:18:1.000
chr3	69210889	69211021	reg1000338.p1	18.806	+	AM393202 BC121019 BC017925 AL832033 AK300096 AL832709 BC039202 NM_198271	-39315	-	TSC_hg19_v1_chr3_+_69134171 NM_006407 AF070523 AF115965 AF125530 AB097051 AF161476 AK301637 AK303148 AK074612 BC005143 BC107899 BC020797 AB014765 AK223566 AK312731 AB052638 AY102608	-76828	+	TSC_hg19_v1_chr3_-_69129517 AB463332 AM392893 AM393088 CR533537 CU692738 DQ893167 DQ896465 AK314751 AK289392 AK002159 AL117566 BC022853 NM_003968 NM_198195 AK298878 AK316540	-81432	-	TSC_hg19_v1_chr3_-_69299315 AK295045	88355	-	AB023230 TSC_hg19_v1_chr3_-_69435240	224276	-	NM_015123 BC057836	224486	-	AM393202|LMOD3|56203|leiomodin 3 (fetal)##BC121019|LMOD3|56203|leiomodin 3 (fetal)##BC017925|LMOD3|56203|leiomodin 3 (fetal)##AL832033|LMOD3|56203|leiomodin 3 (fetal)##AK300096|LMOD3|56203|leiomodin 3 (fetal)##AL832709|LMOD3|56203|leiomodin 3 (fetal)##BC039202|LMOD3|56203|leiomodin 3 (fetal)##NM_198271|LMOD3|56203|leiomodin 3 (fetal)##NM_006407|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF070523|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF115965|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF125530|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB097051|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF161476|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK301637|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK074612|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC005143|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC107899|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC020797|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB014765|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK223566|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK312731|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB052638|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AY102608|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3##CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3##DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3##DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3##BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3##NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3##NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK295045|FRMD4B|23150|FERM domain containing 4B##AB023230|FRMD4B|23150|FERM domain containing 4B##NM_015123|FRMD4B|23150|FERM domain containing 4B##BC057836|FRMD4B|23150|FERM domain containing 4B	0.0	
chr18	77140962	77141087	reg1000393.p1	18.804	+	TSC_hg19_v1_chr18_+_76856487 CU690988	-284525	+	TSC_hg19_v1_chr18_+_76829420 BC053561	-311575	+	BC036473 TSC_hg19_v1_chr18_+_76829395 AK308291 BC022535 BC125219 BC125220 NM_198531 AK093704 AX748269 AK295981	-311625	+	TSC_hg19_v1_chr18_+_77155750 NM_006162 NM_172388 NM_172390 U80917	14789	+	TSC_hg19_v1_chr18_+_77155929 AK292641	14909	+	U80919 TSC_hg19_v1_chr18_+_77155946	14922	+	BC053561|ATP9B|374868|ATPase, class II, type 9B##BC036473|ATP9B|374868|ATPase, class II, type 9B##AK308291|ATP9B|374868|ATPase, class II, type 9B##BC022535|ATP9B|374868|ATPase, class II, type 9B##BC125219|ATP9B|374868|ATPase, class II, type 9B##BC125220|ATP9B|374868|ATPase, class II, type 9B##NM_198531|ATP9B|374868|ATPase, class II, type 9B##AK093704|ATP9B|374868|ATPase, class II, type 9B##AK295981|ATP9B|374868|ATPase, class II, type 9B##NM_006162|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172388|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172390|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80917|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK292641|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80919|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	0.895624	CTCF.p2:-15:0.896
chr14	96741959	96742093	reg1000322.p1	18.801	+	AK291970 AK309528 NM_000710 TSC_hg19_v1_chr14_+_96722546 U30271 AJ238044	-19472	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	-70830	+	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	-70949	+	TSC_hg19_v1_chr14_-_96829651 AK055200 NM_018036	87636	-	TSC_hg19_v1_chr14_+_96829862 AK000796 AK314423 AF151044	87842	+	BC004818 NM_016472	103995	+	AK291970|BDKRB1|623|bradykinin receptor B1##AK309528|BDKRB1|623|bradykinin receptor B1##NM_000710|BDKRB1|623|bradykinin receptor B1##U30271|BDKRB1|623|bradykinin receptor B1##AJ238044|BDKRB1|623|bradykinin receptor B1##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK055200|ATG2B|55102|ATG2 autophagy related 2 homolog B (S. cerevisiae)##NM_018036|ATG2B|55102|ATG2 autophagy related 2 homolog B (S. cerevisiae)##AK000796|C14orf129|51527|chromosome 14 open reading frame 129##AK314423|C14orf129|51527|chromosome 14 open reading frame 129##AF151044|C14orf129|51527|chromosome 14 open reading frame 129##BC004818|C14orf129|51527|chromosome 14 open reading frame 129##NM_016472|C14orf129|51527|chromosome 14 open reading frame 129	0.998765	CTCF.p2:13:0.999
chr17	74462202	74462325	reg1000227.p1	18.791	+	BC092430 NM_001166579	-12831	+	TSC_hg19_v1_chr17_-_74449273 AB051521 NM_022066	-12975	-	BC007822 TSC_hg19_v1_chr17_-_74449235	-13020	-	NM_001088 U40347 AB593119 BC069434	1394	+	AK303434 AY500247 AK292166 NM_001005498	21635	-	TSC_hg19_v1_chr17_-_74497506 BC016034 AK292135 NM_024599	35196	-	BC092430|AANAT|15|aralkylamine N-acetyltransferase##NM_001166579|AANAT|15|aralkylamine N-acetyltransferase##AB051521|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_022066|UBE2O|63893|ubiquitin-conjugating enzyme E2O##BC007822|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_001088|AANAT|15|aralkylamine N-acetyltransferase##U40347|AANAT|15|aralkylamine N-acetyltransferase##AB593119|AANAT|15|aralkylamine N-acetyltransferase##BC069434|AANAT|15|aralkylamine N-acetyltransferase##AK303434|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AY500247|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292166|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001005498|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##BC016034|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292135|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_024599|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)	0.999596	CTCF.p2:-17:1.000
chr7	100157514	100157634	reg1000320.p1	18.784	+	TSC_hg19_v1_chr7_+_100136847 AK314954 BC017329 AB527774 CU675942	-20667	+	TSC_hg19_v1_chr7_+_100136826 NM_006076 BC009393	-20763	+	AK124773 NM_173564	-76025	+	NM_001168682	13695	-	AB528535 DQ893565 DQ894240 TSC_hg19_v1_chr7_-_100183751 AK074833 AK302410	26163	-	TSC_hg19_v1_chr7_-_100183753 BC018529 NM_002319	26201	-	AK314954|AGFG2|3268|ArfGAP with FG repeats 2##BC017329|AGFG2|3268|ArfGAP with FG repeats 2##NM_006076|AGFG2|3268|ArfGAP with FG repeats 2##BC009393|AGFG2|3268|ArfGAP with FG repeats 2##AK124773|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_173564|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_001168682|SAP25|100316904|Sin3A-associated protein, 25kDa##DQ893565|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##DQ894240|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##AK074833|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##AK302410|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##BC018529|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##NM_002319|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4	0.995202	CTCF.p2:4:0.995
chr22	50648392	50648499	reg1000360.p1	18.780	+	CR456464 BC001099 CU013014 CU013302 TSC_hg19_v1_chr22_+_50640050	-8475	+	TSC_hg19_v1_chr22_+_50639439 AY324823 NM_031454 BC110866 BC051758	-9007	+	TSC_hg19_v1_chr22_+_50624353 BC012445 AL449244 NM_025204 AK292050 AY203945	-24064	+	AB051456 TSC_hg19_v1_chr22_-_50682891	34401	-	TSC_hg19_v1_chr22_-_50682948 BC144488 BC144489 BC150613 AF272887	34527	-	TSC_hg19_v1_chr22_-_50683439 BC151209 NM_020461 AL832617 AK310419	34985	-	CR456464|SELO|83642|selenoprotein O##BC001099|SELO|83642|selenoprotein O##AY324823|SELO|83642|selenoprotein O##NM_031454|SELO|83642|selenoprotein O##BC110866|SELO|83642|selenoprotein O##BC051758|SELO|83642|selenoprotein O##BC012445|TRABD|80305|TraB domain containing##AL449244|TRABD|80305|TraB domain containing##NM_025204|TRABD|80305|TraB domain containing##AK292050|TRABD|80305|TraB domain containing##AY203945|TRABD|80305|TraB domain containing##AB051456|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC144488|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC144489|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC150613|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AF272887|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC151209|TUBGCP6|85378|tubulin, gamma complex associated protein 6##NM_020461|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AL832617|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AK310419|TUBGCP6|85378|tubulin, gamma complex associated protein 6	0.979485	CTCF.p2:0:0.979
chr7	101915619	101915730	reg1000152.p2	18.780	+	M74099 NM_181552	-454793	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-456465	+	BC002778 NM_138403	-643099	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	12723	+	TSC_hg19_v1_chr7_+_101928431 AB000520	12769	+	NM_001146210	81214	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.997118	CTCF.p2:3:0.997
chr16	48387598	48387742	reg1000390.p1	18.778	+	AK074775 AK127125 TSC_hg19_v1_chr16_+_48278216 BC093910 BC093912 BC143246 AK027544 AK294779	-109400	+	TSC_hg19_v1_chr16_+_48278210 AJ548761 NM_031490	-109476	+	AF367202 AF411579 NM_032583 NM_145186	-118583	-	BC042550 TSC_hg19_v1_chr16_-_48399765	12090	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	12121	-	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	31582	-	AK074775|LONP2|83752|lon peptidase 2, peroxisomal##AK127125|LONP2|83752|lon peptidase 2, peroxisomal##BC093910|LONP2|83752|lon peptidase 2, peroxisomal##BC093912|LONP2|83752|lon peptidase 2, peroxisomal##BC143246|LONP2|83752|lon peptidase 2, peroxisomal##AK027544|LONP2|83752|lon peptidase 2, peroxisomal##AK294779|LONP2|83752|lon peptidase 2, peroxisomal##AJ548761|LONP2|83752|lon peptidase 2, peroxisomal##NM_031490|LONP2|83752|lon peptidase 2, peroxisomal##AF367202|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF411579|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_032583|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_145186|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##BC042550|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	0.922079	CTCF.p2:-13:0.873
chr8	53320302	53320428	reg1000493.p1	18.765	+	AK299452 TSC_hg19_v1_chr8_+_52812239	-508142	+	TSC_hg19_v1_chr8_-_52811724 NM_052937	-508638	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	-508763	-	BC026316 AB011107 AK311188 BC031075 NM_014682 BC025662	1955	-	BC130641 BC130643 BC144534 AY358213 NM_207413	157628	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	306621	-	NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC130641|FAM150A|389658|family with sequence similarity 150, member A##BC130643|FAM150A|389658|family with sequence similarity 150, member A##BC144534|FAM150A|389658|family with sequence similarity 150, member A##AY358213|FAM150A|389658|family with sequence similarity 150, member A##NM_207413|FAM150A|389658|family with sequence similarity 150, member A##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1	0.997319	CTCF.p2:-1:0.997
chr1	156115900	156116046	reg1000460.p1	18.757	+	TSC_hg19_v1_chr1_+_156084585 AY528714 AB527090 EU831758 EU831836 EU832167 EU832261 CU677029 CU678414 AY847595 AY847596 AY847597	-31329	+	TSC_hg19_v1_chr1_+_156084568 M13451	-31403	+	TSC_hg19_v1_chr1_+_156084553 BC003162 AK130179	-31422	+	NM_001193301 AY358531	3798	+	NM_001193300 NM_022367 AK296693 TSC_hg19_v1_chr1_+_156123375 AK091127 AK290353 AX746794 NM_001193302 AK315547 BX640891 BC020974	7381	+	TSC_hg19_v1_chr1_+_156163725 NM_014655	47765	+	AY528714|LMNA|4000|lamin A/C##EU831758|LMNA|4000|lamin A/C##EU831836|LMNA|4000|lamin A/C##EU832167|LMNA|4000|lamin A/C##EU832261|LMNA|4000|lamin A/C##AY847595|LMNA|4000|lamin A/C##AY847596|LMNA|4000|lamin A/C##AY847597|LMNA|4000|lamin A/C##M13451|LMNA|4000|lamin A/C##BC003162|LMNA|4000|lamin A/C##AK130179|LMNA|4000|lamin A/C##NM_001193301|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AY358531|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_001193300|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_022367|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK296693|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK091127|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK290353|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_001193302|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK315547|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##BX640891|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##BC020974|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_014655|SLC25A44|9673|solute carrier family 25, member 44	0.050674	
chr19	8317966	8318100	reg1000325.p1	18.755	+	TSC_hg19_v1_chr19_+_8274253 NM_024552 AK222621 AK225394 AK022151 BC063621	-43785	+	AB384635 AB053450 BC153882 NM_032447	-105658	-	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	-200086	+	TSC_hg19_v1_chr19_-_8373195 CR457174 EU831651 BC036814 BC007083 AY358420 AL365455 BC000668 AK222623 AK315656 AL136652 AK058014 AF161254 NM_001165895 NM_016579	55176	-	TSC_hg19_v1_chr19_-_8386260 AF050637 CR456915 CR542266 BC107892 AF054178	68224	-	TSC_hg19_v1_chr19_-_8386300 BC003102 NM_005001	68253	-	NM_024552|CERS4|79603|ceramide synthase 4##AK222621|CERS4|79603|ceramide synthase 4##AK225394|CERS4|79603|ceramide synthase 4##AK022151|CERS4|79603|ceramide synthase 4##BC063621|CERS4|79603|ceramide synthase 4##AB053450|FBN3|84467|fibrillin 3##BC153882|FBN3|84467|fibrillin 3##NM_032447|FBN3|84467|fibrillin 3##BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25##CR457174|CD320|51293|CD320 molecule##EU831651|CD320|51293|CD320 molecule##BC036814|CD320|51293|CD320 molecule##BC007083|CD320|51293|CD320 molecule##AY358420|CD320|51293|CD320 molecule##AL365455|CD320|51293|CD320 molecule##BC000668|CD320|51293|CD320 molecule##AK222623|CD320|51293|CD320 molecule##AK315656|CD320|51293|CD320 molecule##AL136652|CD320|51293|CD320 molecule##AK058014|CD320|51293|CD320 molecule##AF161254|CD320|51293|CD320 molecule##NM_001165895|CD320|51293|CD320 molecule##NM_016579|CD320|51293|CD320 molecule##AF050637|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR456915|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR542266|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##BC107892|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##AF054178|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##BC003102|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##NM_005001|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa	0.984731	CTCF.p2:27:0.985
chr10	125754253	125754398	reg1000354.p1	18.750	+	BC137492 BC146862 AY358565 NM_198148	-102829	-	AJ505757 NM_153442 BC112011 BC113462	-328448	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-839969	+	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	97574	-	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	98828	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	353148	-	BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase	1.014826	CTCF.p2:-16:1.000
chr14	99984879	99984999	reg1000365.p1	18.750	+	TSC_hg19_v1_chr14_+_99947745 NM_001099402 BC015935 AK311075	-37180	+	TSC_hg19_v1_chr14_-_99947224 BX161471 NM_032233 NM_199123 BC142995	-37718	-	TSC_hg19_v1_chr14_-_99947170 BC037395	-37760	-	TSC_hg19_v1_chr14_-_100070545 NM_001144995	85645	-	AB593097 AY358173 NM_001127258 NM_032425 BC132877 BC136577 HQ258579 AB593096	126623	+	TSC_hg19_v1_chr14_+_100150596 AB209749 BC022539 AF094480 NM_006668	165736	+	NM_001099402|CCNK|8812|cyclin K##BC015935|CCNK|8812|cyclin K##AK311075|CCNK|8812|cyclin K##BX161471|SETD3|84193|SET domain containing 3##NM_032233|SETD3|84193|SET domain containing 3##NM_199123|SETD3|84193|SET domain containing 3##BC142995|SETD3|84193|SET domain containing 3##BC037395|SETD3|84193|SET domain containing 3##NM_001144995|CCDC85C|317762|coiled-coil domain containing 85C##AB593097|HHIPL1|84439|HHIP-like 1##AY358173|HHIPL1|84439|HHIP-like 1##NM_001127258|HHIPL1|84439|HHIP-like 1##NM_032425|HHIPL1|84439|HHIP-like 1##BC132877|HHIPL1|84439|HHIP-like 1##BC136577|HHIPL1|84439|HHIP-like 1##HQ258579|HHIPL1|84439|HHIP-like 1##AB593096|HHIPL1|84439|HHIP-like 1##AB209749|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##BC022539|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##AF094480|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##NM_006668|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1	0.993231	CTCF.p2:-4:0.993
chr19	50441034	50441169	reg1000471.p1	18.744	+	TSC_hg19_v1_chr19_-_50433002 NM_016553	-8098	-	TSC_hg19_v1_chr19_-_50432762 BC095410 AK000829 AK125857 NM_172374 NM_012346 NM_153718 NM_153719 DQ079587 DQ079588 DQ079589 NM_001193357	-8321	-	AK225817 TSC_hg19_v1_chr19_-_50432732	-8370	-	AY358135 AB072038 TSC_hg19_v1_chr19_-_50464341 AF337818 NM_001135163 NM_052884	23266	-	AK301031 BC030222 TSC_hg19_v1_chr19_+_50472920 BC039008 EU330985	31800	+	AB031052 BC023556 TSC_hg19_v1_chr19_-_50528626 AK292918 AK294802 AK311220 AK303529	87500	-	NM_016553|NUP62|23636|nucleoporin 62kDa##BC095410|NUP62|23636|nucleoporin 62kDa##AK000829|NUP62|23636|nucleoporin 62kDa##AK125857|NUP62|23636|nucleoporin 62kDa##NM_172374|IL4I1|259307|interleukin 4 induced 1##NM_012346|NUP62|23636|nucleoporin 62kDa##NM_153718|NUP62|23636|nucleoporin 62kDa##NM_153719|NUP62|23636|nucleoporin 62kDa##DQ079587|IL4I1|259307|interleukin 4 induced 1##DQ079588|IL4I1|259307|interleukin 4 induced 1##DQ079589|IL4I1|259307|interleukin 4 induced 1##NM_001193357|NUP62|23636|nucleoporin 62kDa##AK225817|NUP62|23636|nucleoporin 62kDa##AY358135|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##AB072038|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##AF337818|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##NM_001135163|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##NM_052884|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##BC030222|SIGLEC16|400709|sialic acid binding Ig-like lectin 16 (gene/pseudogene)##BC039008|SIGLEC16|400709|sialic acid binding Ig-like lectin 16 (gene/pseudogene)##AB031052|VRK3|51231|vaccinia related kinase 3##BC023556|VRK3|51231|vaccinia related kinase 3##AK292918|VRK3|51231|vaccinia related kinase 3##AK294802|VRK3|51231|vaccinia related kinase 3##AK311220|VRK3|51231|vaccinia related kinase 3##AK303529|VRK3|51231|vaccinia related kinase 3	0.976769	CTCF.p2:-14:0.977
chr10	72221267	72221403	reg1000516.p1	18.741	+	TSC_hg19_v1_chr10_-_72201438 BC104976 NM_018055 BC112025	-19884	-	BC033585 TSC_hg19_v1_chr10_-_72201372	-19969	-	TSC_hg19_v1_chr10_+_72163919 BC050633	-57413	+	TSC_hg19_v1_chr10_+_72238575 NM_014431 AB033100 BC136375 BC136376	17280	+	BC047695 TSC_hg19_v1_chr10_-_72362497 AK312754	141134	-	BC063043 TSC_hg19_v1_chr10_-_72362518 FJ555237 NM_001083116 NM_005041	141191	-	BC104976|NODAL|4838|nodal homolog (mouse)##NM_018055|NODAL|4838|nodal homolog (mouse)##BC112025|NODAL|4838|nodal homolog (mouse)##BC033585|NODAL|4838|nodal homolog (mouse)##BC050633|EIF4EBP2|1979|eukaryotic translation initiation factor 4E binding protein 2##NM_014431|KIAA1274|27143|KIAA1274##AB033100|KIAA1274|27143|KIAA1274##BC136375|KIAA1274|27143|KIAA1274##BC136376|KIAA1274|27143|KIAA1274##BC047695|PRF1|5551|perforin 1 (pore forming protein)##AK312754|PRF1|5551|perforin 1 (pore forming protein)##BC063043|PRF1|5551|perforin 1 (pore forming protein)##FJ555237|PRF1|5551|perforin 1 (pore forming protein)##NM_001083116|PRF1|5551|perforin 1 (pore forming protein)##NM_005041|PRF1|5551|perforin 1 (pore forming protein)	0.296036	CTCF.p2:-5:0.296
chr2	86041446	86041571	reg1000386.p1	18.740	+	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-60503	+	NM_006433 NM_012483 X54101 AK310057 AK311537 AK311012 AK311657 BC063245 AK304728 TSC_hg19_v1_chr2_+_85921514 DQ892267 DQ895468 BC023576 CR541859 X05044	-120028	+	NM_000542 NM_198843	-145645	-	AY152815 NM_001042437	53284	-	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	74578	-	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	291475	-	NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##NM_006433|GNLY|10578|granulysin##NM_012483|GNLY|10578|granulysin##X54101|GNLY|10578|granulysin##AK310057|GNLY|10578|granulysin##AK311537|GNLY|10578|granulysin##AK311012|GNLY|10578|granulysin##AK311657|GNLY|10578|granulysin##BC063245|GNLY|10578|granulysin##AK304728|GNLY|10578|granulysin##DQ892267|GNLY|10578|granulysin##DQ895468|GNLY|10578|granulysin##BC023576|GNLY|10578|granulysin##CR541859|GNLY|10578|granulysin##X05044|GNLY|10578|granulysin##NM_000542|SFTPB|6439|surfactant protein B##NM_198843|SFTPB|6439|surfactant protein B##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa	0.997275	CTCF.p2:4:0.997
chr8	42660497	42660612	reg1000246.p1	18.740	+	NM_001199279 NM_004198	-36626	-	BC069681 BC069703 BC069788 NM_000749 Y08417 U62438 CU686976 CU686982	-107929	+	TSC_hg19_v1_chr8_-_42397069 BC028600 NM_006749	-263493	-	AL832077 BC021721 AK223231 TSC_hg19_v1_chr8_-_42698469 AK001339 NM_018105 NM_199003	37907	-	BC039461 BC032393 BC013422 AK225086 AL136620 AK225568 AK027748 AK090864 AX746655 BC058289 BC044566 NM_001160223 NM_001160224 NM_001160225 NM_030954	91189	-	TSC_hg19_v1_chr8_+_42752068 BC048304 NM_032410	91498	+	NM_001199279|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6##NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6##BC069681|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##BC069703|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##BC069788|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##NM_000749|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##Y08417|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##U62438|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##BC028600|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##NM_006749|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##AL832077|THAP1|55145|THAP domain containing, apoptosis associated protein 1##BC021721|THAP1|55145|THAP domain containing, apoptosis associated protein 1##AK223231|THAP1|55145|THAP domain containing, apoptosis associated protein 1##AK001339|THAP1|55145|THAP domain containing, apoptosis associated protein 1##NM_018105|THAP1|55145|THAP domain containing, apoptosis associated protein 1##NM_199003|THAP1|55145|THAP domain containing, apoptosis associated protein 1##BC039461|RNF170|81790|ring finger protein 170##BC032393|RNF170|81790|ring finger protein 170##BC013422|RNF170|81790|ring finger protein 170##AK225086|RNF170|81790|ring finger protein 170##AL136620|RNF170|81790|ring finger protein 170##AK225568|RNF170|81790|ring finger protein 170##AK027748|RNF170|81790|ring finger protein 170##AK090864|RNF170|81790|ring finger protein 170##BC058289|RNF170|81790|ring finger protein 170##BC044566|RNF170|81790|ring finger protein 170##NM_001160223|RNF170|81790|ring finger protein 170##NM_001160224|RNF170|81790|ring finger protein 170##NM_001160225|RNF170|81790|ring finger protein 170##NM_030954|RNF170|81790|ring finger protein 170##BC048304|HOOK3|84376|hook homolog 3 (Drosophila)##NM_032410|HOOK3|84376|hook homolog 3 (Drosophila)	0.993073	CTCF.p2:26:0.993
chr12	109197395	109197536	reg1000398.p1	18.738	+	TSC_hg19_v1_chr12_-_109125295 AK023205 AK223073 AK304839 AK311315 AK316065 AB030656 NM_014325	-72173	-	TSC_hg19_v1_chr12_-_109125284 BC002342 AB209909	-72185	-	TSC_hg19_v1_chr12_-_109125268 AL162070 AK297463	-72202	-	AK095421 NM_001161331	23861	-	AB072355 AB072356 TSC_hg19_v1_chr12_-_109251307	53825	-	TSC_hg19_v1_chr12_-_109251360 BC062341 NM_001161330 NM_018984	53957	-	AK023205|CORO1C|23603|coronin, actin binding protein, 1C##AK223073|CORO1C|23603|coronin, actin binding protein, 1C##AK304839|CORO1C|23603|coronin, actin binding protein, 1C##AK311315|CORO1C|23603|coronin, actin binding protein, 1C##AK316065|CORO1C|23603|coronin, actin binding protein, 1C##AB030656|CORO1C|23603|coronin, actin binding protein, 1C##NM_014325|CORO1C|23603|coronin, actin binding protein, 1C##BC002342|CORO1C|23603|coronin, actin binding protein, 1C##AB209909|CORO1C|23603|coronin, actin binding protein, 1C##AL162070|CORO1C|23603|coronin, actin binding protein, 1C##AK297463|CORO1C|23603|coronin, actin binding protein, 1C##AK095421|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161331|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072355|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072356|SSH1|54434|slingshot homolog 1 (Drosophila)##BC062341|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161330|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_018984|SSH1|54434|slingshot homolog 1 (Drosophila)	0.998812	CTCF.p2:11:0.999
chr10	74124159	74124289	reg1000361.p1	18.734	+	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	-9298	-	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	-9546	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-90400	+	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	159495	-	TSC_hg19_v1_chr10_-_74385838 BC016641 AK225695 AL117423 AK225298 AK023318	261610	-	TSC_hg19_v1_chr10_-_74385854 BC004190 BC004216	261645	-	NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1##BC016641|MICU1|10367|mitochondrial calcium uptake 1##AK225695|MICU1|10367|mitochondrial calcium uptake 1##AL117423|MICU1|10367|mitochondrial calcium uptake 1##AK225298|MICU1|10367|mitochondrial calcium uptake 1##AK023318|MICU1|10367|mitochondrial calcium uptake 1##BC004190|MICU1|10367|mitochondrial calcium uptake 1##BC004216|MICU1|10367|mitochondrial calcium uptake 1	0.997544	CTCF.p2:-7:0.998
chr6	3732888	3733019	reg1000463.p1	18.727	+	TSC_hg19_v1_chr6_-_3720312 BC031944	-12643	-	BC040876 NM_015482	-276190	-	TSC_hg19_v1_chr6_-_3456513 AL110245	-276439	-	NM_183373 TSC_hg19_v1_chr6_-_3752248	19293	-	BC001261 NM_012135 Y18503	116673	+	TSC_hg19_v1_chr6_+_4021647 BC034969 NM_003913 AK291244 AB011108 AF283465 AB385345 AY029347	288636	+	BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##NM_183373|PXDC1|221749|PX domain containing 1##BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B##BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	0.990607	CTCF.p2:9:0.991
chr11	65278341	65278462	reg1000245.p2	18.726	+	TSC_hg19_v1_chr11_+_65271764 AF001540	-6891	+	TSC_hg19_v1_chr11_+_65268717 BC063689 AK130345	-9884	+	TSC_hg19_v1_chr11_+_65267017 AF001541	-11309	+	TSC_hg19_v1_chr11_+_65292533 NM_001048218 NM_020680	14136	+	TSC_hg19_v1_chr11_+_65292576 AF297709 BC069233 AK314945 AK302198 AB047077 AB051427 AB051428	14199	+	TSC_hg19_v1_chr11_-_65314049 AK090750	35708	-	BC063689|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##AK130345|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##NM_001048218|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##NM_020680|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AF297709|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##BC069233|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK314945|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK302198|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB047077|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB051427|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB051428|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK090750|LTBP3|4054|latent transforming growth factor beta binding protein 3	0.992857	CTCF.p2:15:0.993
chr8	12458991	12459107	reg1000425.p1	18.720	+	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-165145	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-165206	-	DQ012022 NM_001037804 NM_001195257	-283225	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	153955	-	AK296010 NM_020844	344117	+	AB040889 NM_001099677	410723	+	BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456	0.99935	CTCF.p2:5:0.999
chr13	99097710	99097853	reg1000424.p1	18.718	+	TSC_hg19_v1_chr13_+_99058147 AF339817	-39575	+	AB464689 EU446571 AF539427 BC025388 BC017585 NM_178861	-268276	-	TSC_hg19_v1_chr13_+_98795717 AB008430 BC065020	-302063	+	AF083420 NM_003576	76514	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	131273	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	131341	-	EU446571|RNF113B|140432|ring finger protein 113B##AF539427|RNF113B|140432|ring finger protein 113B##BC025388|RNF113B|140432|ring finger protein 113B##BC017585|RNF113B|140432|ring finger protein 113B##NM_178861|RNF113B|140432|ring finger protein 113B##AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##AF083420|STK24|8428|serine/threonine kinase 24##NM_003576|STK24|8428|serine/threonine kinase 24##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24	0.581907	CTCF.p2:-12:0.582
chr9	6306079	6306187	reg1000225.p1	18.703	+	NM_001199640 NM_001199641 NM_033439 AK295908 AK313414 TSC_hg19_v1_chr9_+_6215806 AK303943 BC047085	-90337	+	AF039023 AK300408 BC098406 TSC_hg19_v1_chr9_-_6015616 AK307840 BX537405 NM_001243202 NM_001243203 NM_012416	-290502	-	TSC_hg19_v1_chr9_-_6007953 NM_001017969	-298169	-	NM_001001874 NM_001001875 NM_033516 AK057479 AY032877 BC017589 BC042113 BC033792	22242	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	107011	+	TSC_hg19_v1_chr9_+_6413200 AK308433	107064	+	NM_001199640|IL33|90865|interleukin 33##NM_001199641|IL33|90865|interleukin 33##NM_033439|IL33|90865|interleukin 33##AK295908|IL33|90865|interleukin 33##AK313414|IL33|90865|interleukin 33##AK303943|IL33|90865|interleukin 33##BC047085|IL33|90865|interleukin 33##AF039023|RANBP6|26953|RAN binding protein 6##AK300408|RANBP6|26953|RAN binding protein 6##BC098406|RANBP6|26953|RAN binding protein 6##BX537405|RANBP6|26953|RAN binding protein 6##NM_001243202|RANBP6|26953|RAN binding protein 6##NM_001243203|RANBP6|26953|RAN binding protein 6##NM_012416|RANBP6|26953|RAN binding protein 6##NM_001017969|KIAA2026|158358|KIAA2026##NM_001001874|TPD52L3|89882|tumor protein D52-like 3##NM_001001875|TPD52L3|89882|tumor protein D52-like 3##NM_033516|TPD52L3|89882|tumor protein D52-like 3##AK057479|TPD52L3|89882|tumor protein D52-like 3##AY032877|TPD52L3|89882|tumor protein D52-like 3##BC017589|TPD52L3|89882|tumor protein D52-like 3##BC042113|TPD52L3|89882|tumor protein D52-like 3##BC033792|TPD52L3|89882|tumor protein D52-like 3##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK308433|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	0.957932	CTCF.p2:24:0.958
chr1	21581835	21581937	reg1000238.p1	18.698	+	TSC_hg19_v1_chr1_-_21503387 NM_001198801 NM_001198802	-78516	-	TSC_hg19_v1_chr1_-_21503344 BC072413 AB209119	-78562	-	BC030578 NM_001198803	-80647	-	D43698 TSC_hg19_v1_chr1_-_21606025 BX648351 NM_001113347	24197	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	34822	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	35048	-	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##D43698|ECE1|1889|endothelin converting enzyme 1##BX648351|ECE1|1889|endothelin converting enzyme 1##NM_001113347|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1	0.999662	CTCF.p2:-5:1.000
chr22	46512449	46512595	reg1000328.p1	18.698	+	AB528792 AK001807 NM_018280 TSC_hg19_v1_chr22_-_46450052	-62510	-	TSC_hg19_v1_chr22_+_46449736 BC036832	-62798	+	AF416743 NM_058238 TSC_hg19_v1_chr22_-_46373045	-139493	-	NM_001001928 NM_005036 AY258330 TSC_hg19_v1_chr22_+_46546555 AY258328	34008	+	TSC_hg19_v1_chr22_+_46546708 AK289821	34188	+	TSC_hg19_v1_chr22_-_46646191 BC036462 BC067871 NM_207327 BX648331	133686	-	AK001807|C22orf26|55267|chromosome 22 open reading frame 26##NM_018280|C22orf26|55267|chromosome 22 open reading frame 26##AF416743|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_058238|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_001001928|PPARA|5465|peroxisome proliferator-activated receptor alpha##NM_005036|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258330|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258328|PPARA|5465|peroxisome proliferator-activated receptor alpha##AK289821|PPARA|5465|peroxisome proliferator-activated receptor alpha##BC036462|C22orf40|150383|chromosome 22 open reading frame 40##BC067871|C22orf40|150383|chromosome 22 open reading frame 40##NM_207327|C22orf40|150383|chromosome 22 open reading frame 40##BX648331|C22orf40|150383|chromosome 22 open reading frame 40	0.48097	CTCF.p2:56:0.463
chr3	50310442	50310568	reg1000281.p1	18.698	+	TSC_hg19_v1_chr3_+_50306602 BC013975 BC024220 AF217991 AB083186 EU832609 EU832680	-3879	+	AB209322 TSC_hg19_v1_chr3_+_50306434 U28369	-4133	+	AK308875 NM_001005914 NM_004636 TSC_hg19_v1_chr3_+_50305047	-5486	+	BC028000 NM_153215 AK095927 EU832119 EU832213	6025	+	U09585 BT019999 EU832626 EU832699 CU675591 TSC_hg19_v1_chr3_-_50329861 AK309114 BC001676 AK074763 BC001327 BC007265 BC007437 NM_006764	19358	-	TSC_hg19_v1_chr3_-_50336292 AF040706 NM_001200029 NM_001200018	25786	-	BC013975|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##BC024220|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##AF217991|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##AB083186|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##EU832609|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##EU832680|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##AB209322|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##U28369|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##AK308875|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##NM_001005914|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##NM_004636|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##BC028000|C3orf45|132228|chromosome 3 open reading frame 45##NM_153215|C3orf45|132228|chromosome 3 open reading frame 45##AK095927|C3orf45|132228|chromosome 3 open reading frame 45##EU832119|C3orf45|132228|chromosome 3 open reading frame 45##EU832213|C3orf45|132228|chromosome 3 open reading frame 45##U09585|IFRD2|7866|interferon-related developmental regulator 2##BT019999|IFRD2|7866|interferon-related developmental regulator 2##EU832626|IFRD2|7866|interferon-related developmental regulator 2##EU832699|IFRD2|7866|interferon-related developmental regulator 2##AK309114|IFRD2|7866|interferon-related developmental regulator 2##BC001676|IFRD2|7866|interferon-related developmental regulator 2##AK074763|IFRD2|7866|interferon-related developmental regulator 2##BC001327|IFRD2|7866|interferon-related developmental regulator 2##BC007265|IFRD2|7866|interferon-related developmental regulator 2##BC007437|IFRD2|7866|interferon-related developmental regulator 2##NM_006764|IFRD2|7866|interferon-related developmental regulator 2##AF040706|NAT6|24142|N-acetyltransferase 6 (GCN5-related)##NM_001200029|HYAL3|8372|hyaluronoglucosaminidase 3##NM_001200018|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	1.112847	CTCF.p2:18:0.955
chr11	92967913	92968037	reg1000217.p1	18.697	+	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	-36890	-	TSC_hg19_v1_chr11_-_92930978 CU690400	-36988	-	BC069163 NM_005959 U25341 AY521019	-265136	+	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	95868	+	AF197137 TSC_hg19_v1_chr11_-_93276558 BC031564 NM_020179	308560	-	TSC_hg19_v1_chr11_+_93394847 NM_033395 BC015989 BC017394	426859	+	AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B##NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67##AF197137|C11orf75|56935|chromosome 11 open reading frame 75##BC031564|C11orf75|56935|chromosome 11 open reading frame 75##NM_020179|C11orf75|56935|chromosome 11 open reading frame 75##NM_033395|KIAA1731|85459|KIAA1731##BC015989|KIAA1731|85459|KIAA1731##BC017394|KIAA1731|85459|KIAA1731	0.0	
chr12	48173196	48173326	reg1000389.p1	18.696	+	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-6227	+	AK092448 NM_001098531	-20387	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	-20852	-	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	40403	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	125540	-	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	184077	+	NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C	0.99962	CTCF.p2:7:1.000
chr14	103985021	103985139	reg1000346.p1	18.696	+	TSC_hg19_v1_chr14_+_103851775 AF465413 BC024773 U64205	-133194	+	TSC_hg19_v1_chr14_+_103851772 BX161395	-133310	+	TSC_hg19_v1_chr14_+_103851700 NM_001128918 NM_001128919 NM_001128920 NM_001128921 NM_002376	-133377	+	CR542268 CU676412 M16364 TSC_hg19_v1_chr14_-_103988931	3800	-	M16451 L47647 TSC_hg19_v1_chr14_-_103989168 BC004914 BC019259 BC008323 BC001190 BC019281 BC010002 AK290101 AK312282 AK298198	4063	-	NM_001823 TSC_hg19_v1_chr14_-_103989206	4122	-	AF465413|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##BC024773|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##U64205|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##BX161395|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128918|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128919|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128920|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128921|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_002376|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##CR542268|CKB|1152|creatine kinase, brain##M16364|CKB|1152|creatine kinase, brain##M16451|CKB|1152|creatine kinase, brain##L47647|CKB|1152|creatine kinase, brain##BC004914|CKB|1152|creatine kinase, brain##BC019259|CKB|1152|creatine kinase, brain##BC008323|CKB|1152|creatine kinase, brain##BC001190|CKB|1152|creatine kinase, brain##BC019281|CKB|1152|creatine kinase, brain##BC010002|CKB|1152|creatine kinase, brain##AK290101|CKB|1152|creatine kinase, brain##AK312282|CKB|1152|creatine kinase, brain##AK298198|CKB|1152|creatine kinase, brain##NM_001823|CKB|1152|creatine kinase, brain	0.999924	CTCF.p2:-5:1.000
chr1	53744043	53744184	reg1000384.p1	18.695	+	DQ891289 DQ894473 AB528424 TSC_hg19_v1_chr1_-_53704191 AF035940 BC018211 AK297895 AF067173 AK312113 NM_002370	-39912	-	TSC_hg19_v1_chr1_-_53686277 AK000587 BC010908 NM_017887	-57839	-	TSC_hg19_v1_chr1_+_53662495 BC002445 BC005172 AK312687 M58581	-81617	+	Z75190 D50678 BC051836 TSC_hg19_v1_chr1_-_53793738	49549	-	TSC_hg19_v1_chr1_-_53793743 NM_001018054 NM_004631 NM_017522 NM_033300	49668	-	AK057273 NM_033067 AJ291671	180994	+	DQ891289|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##DQ894473|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF035940|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##BC018211|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK297895|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF067173|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK312113|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##NM_002370|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK000587|C1orf123|54987|chromosome 1 open reading frame 123##BC010908|C1orf123|54987|chromosome 1 open reading frame 123##NM_017887|C1orf123|54987|chromosome 1 open reading frame 123##BC002445|CPT2|1376|carnitine palmitoyltransferase 2##BC005172|CPT2|1376|carnitine palmitoyltransferase 2##AK312687|CPT2|1376|carnitine palmitoyltransferase 2##M58581|CPT2|1376|carnitine palmitoyltransferase 2##Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	0.545624	CTCF.p2:-26:0.546
chr1	29203813	29203932	reg1000249.p2	18.687	+	NM_000911 U07882	-65219	+	TSC_hg19_v1_chr1_+_29063503 AK303833 NM_001172828 AF432214 AF155095 AF192968 DQ892157 DQ895352 CU678040 AB451335 AB451484	-140335	+	NM_001173128 NM_016258 BC002559 AK292581 TSC_hg19_v1_chr1_+_29063435	-140589	+	TSC_hg19_v1_chr1_+_29213611 AB209649 NM_001166005 NM_001166007 NM_004437 NM_203342 NM_203343	9719	+	TSC_hg19_v1_chr1_+_29213624 M14993 M61733 J03796	9785	+	TSC_hg19_v1_chr1_+_29241080 NM_001166006 BC039079 AK310655	37209	+	NM_000911|OPRD1|4985|opioid receptor, delta 1##U07882|OPRD1|4985|opioid receptor, delta 1##AK303833|YTHDF2|51441|YTH domain family, member 2##NM_001172828|YTHDF2|51441|YTH domain family, member 2##AF432214|YTHDF2|51441|YTH domain family, member 2##AF155095|YTHDF2|51441|YTH domain family, member 2##AF192968|YTHDF2|51441|YTH domain family, member 2##DQ892157|YTHDF2|51441|YTH domain family, member 2##DQ895352|YTHDF2|51441|YTH domain family, member 2##AB451335|YTHDF2|51441|YTH domain family, member 2##AB451484|YTHDF2|51441|YTH domain family, member 2##NM_001173128|YTHDF2|51441|YTH domain family, member 2##NM_016258|YTHDF2|51441|YTH domain family, member 2##BC002559|YTHDF2|51441|YTH domain family, member 2##AK292581|YTHDF2|51441|YTH domain family, member 2##AB209649|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166005|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166007|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_004437|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203342|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203343|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M14993|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M61733|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##J03796|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	0.995305	CTCF.p2:10:0.995
chr11	125011731	125011871	reg1000376.p1	18.678	+	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	-30332	-	NM_001080546	-38597	-	TSC_hg19_v1_chr11_+_124933200 AK290314 AK074100 BC051314 CU690800	-78571	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	22777	+	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	22825	+	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	354340	-	BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##NM_001080546|TMEM218|219854|transmembrane protein 218##AK290314|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##AK074100|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##BC051314|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)	0.997327	CTCF.p2:9:0.997
chr12	106530071	106530199	reg1000560.p1	18.676	+	AJ311378 TSC_hg19_v1_chr12_+_105724640	-805496	+	TSC_hg19_v1_chr12_+_105724468 BC013920 NM_001145199 BC067897 BC045812 BC061920 AK056999 AJ311377	-805664	+	CU689714 AB527678 DQ892107 DQ895301 TSC_hg19_v1_chr12_-_105629989 AK001521 AK290562 AK297100 BC033731 BC028008 AY113704 NM_001251904 NM_018171	-900225	-	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	2547	-	AB011109 BC152462 NM_014840	3675	-	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	111712	-	AJ311378|C12orf75|387882|chromosome 12 open reading frame 75##BC013920|C12orf75|387882|chromosome 12 open reading frame 75##NM_001145199|C12orf75|387882|chromosome 12 open reading frame 75##BC067897|C12orf75|387882|chromosome 12 open reading frame 75##BC045812|C12orf75|387882|chromosome 12 open reading frame 75##BC061920|C12orf75|387882|chromosome 12 open reading frame 75##AK056999|C12orf75|387882|chromosome 12 open reading frame 75##AJ311377|C12orf75|387882|chromosome 12 open reading frame 75##DQ892107|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##DQ895301|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK001521|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK290562|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK297100|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC033731|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC028008|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AY113704|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251904|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_018171|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4	0.996521	CTCF.p2:12:0.997
chr9	125112965	125113096	reg1000421.p1	18.674	+	BC002814 NM_199177 BC053604 BC013049 CU680480	-79883	+	AK291809 AK292790 TSC_hg19_v1_chr9_+_125027193 AK298046 AK300718 AK316266 AK291603	-85855	+	TSC_hg19_v1_chr9_-_125027120 AK310807 BC008942 BC019319 AK301050 AK310008 AK057676 AK299625 NM_033117	-85918	-	TSC_hg19_v1_chr9_+_125132811 AK308222	19773	+	AK295221 TSC_hg19_v1_chr9_+_125132823	19809	+	NM_000962 NM_080591 TSC_hg19_v1_chr9_+_125133302 BC029840	20241	+	BC002814|MRRF|92399|mitochondrial ribosome recycling factor##NM_199177|MRRF|92399|mitochondrial ribosome recycling factor##BC053604|MRRF|92399|mitochondrial ribosome recycling factor##BC013049|MRRF|92399|mitochondrial ribosome recycling factor##AK291809|MRRF|92399|mitochondrial ribosome recycling factor##AK292790|MRRF|92399|mitochondrial ribosome recycling factor##AK300718|MRRF|92399|mitochondrial ribosome recycling factor##AK291603|MRRF|92399|mitochondrial ribosome recycling factor##AK310807|RBM18|92400|RNA binding motif protein 18##BC008942|RBM18|92400|RNA binding motif protein 18##BC019319|RBM18|92400|RNA binding motif protein 18##AK301050|RBM18|92400|RNA binding motif protein 18##AK310008|RBM18|92400|RNA binding motif protein 18##AK057676|RBM18|92400|RNA binding motif protein 18##AK299625|RBM18|92400|RNA binding motif protein 18##NM_033117|RBM18|92400|RNA binding motif protein 18##AK308222|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##AK295221|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##NM_000962|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##NM_080591|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##BC029840|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)	1.034026	CTCF.p2:6:1.000
chr10	72124349	72124499	reg1000483.p1	18.672	+	TSC_hg19_v1_chr10_-_72083680 AL122117	-40726	-	NM_022146	-80975	-	AF108211 AB590125 AF217186 DQ893597 AB026723 TSC_hg19_v1_chr10_-_71993148 BC107882 AF154065 BC105034 BC105036 AF092439 AF119665 BC001022 BC061581 AK058193 NM_021129	-131271	-	BC024001 AY358318 NM_207119	16956	-	AK094734 TSC_hg19_v1_chr10_-_72142380 AK001613 AK001706 NM_018205 NM_018239	17940	-	NM_004096 TSC_hg19_v1_chr10_+_72163879	39446	+	AL122117|LRRC20|55222|leucine rich repeat containing 20##NM_022146|NPFFR1|64106|neuropeptide FF receptor 1##AF108211|PPA1|5464|pyrophosphatase (inorganic) 1##AF217186|PPA1|5464|pyrophosphatase (inorganic) 1##DQ893597|PPA1|5464|pyrophosphatase (inorganic) 1##AB026723|PPA1|5464|pyrophosphatase (inorganic) 1##BC107882|PPA1|5464|pyrophosphatase (inorganic) 1##AF154065|PPA1|5464|pyrophosphatase (inorganic) 1##BC105034|PPA1|5464|pyrophosphatase (inorganic) 1##BC105036|PPA1|5464|pyrophosphatase (inorganic) 1##AF092439|PPA1|5464|pyrophosphatase (inorganic) 1##AF119665|PPA1|5464|pyrophosphatase (inorganic) 1##BC001022|PPA1|5464|pyrophosphatase (inorganic) 1##BC061581|PPA1|5464|pyrophosphatase (inorganic) 1##AK058193|PPA1|5464|pyrophosphatase (inorganic) 1##NM_021129|PPA1|5464|pyrophosphatase (inorganic) 1##BC024001|LRRC20|55222|leucine rich repeat containing 20##AY358318|LRRC20|55222|leucine rich repeat containing 20##NM_207119|LRRC20|55222|leucine rich repeat containing 20##AK094734|LRRC20|55222|leucine rich repeat containing 20##AK001613|LRRC20|55222|leucine rich repeat containing 20##AK001706|LRRC20|55222|leucine rich repeat containing 20##NM_018205|LRRC20|55222|leucine rich repeat containing 20##NM_018239|LRRC20|55222|leucine rich repeat containing 20##NM_004096|EIF4EBP2|1979|eukaryotic translation initiation factor 4E binding protein 2	0.99935	CTCF.p2:20:0.999
chr20	48227746	48227879	reg1000218.p2	18.672	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	-43123	-	BC110572 BC110573 NM_004975	-128633	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-332617	+	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	102418	-	AB004550 TSC_hg19_v1_chr20_-_48330359	102544	-	TSC_hg19_v1_chr20_-_48330471 NM_004776	102654	-	AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.218221	CTCF.p2:-9:0.218
chr6	35704169	35704296	reg1000452.p1	18.670	+	BC042605 NM_001145775	-7873	-	TSC_hg19_v1_chr6_-_35656693 BC111050 AK222807 AK302704 AK303356 AK312422 BX647390 NM_001145776 AF194172 U71321 NM_001145777 NM_004117	-47526	-	TSC_hg19_v1_chr6_-_35656616 HM245391 AB209893	-47612	-	AK058119 BC033033 NM_145028	626	+	AY358823 NM_207409	40159	+	DQ823638 BC150543 BC150544 BC133046 BC137392 NM_001010886	44593	+	BC042605|FKBP5|2289|FK506 binding protein 5##NM_001145775|FKBP5|2289|FK506 binding protein 5##BC111050|FKBP5|2289|FK506 binding protein 5##AK222807|FKBP5|2289|FK506 binding protein 5##AK302704|FKBP5|2289|FK506 binding protein 5##AK303356|FKBP5|2289|FK506 binding protein 5##AK312422|FKBP5|2289|FK506 binding protein 5##BX647390|FKBP5|2289|FK506 binding protein 5##NM_001145776|FKBP5|2289|FK506 binding protein 5##AF194172|FKBP5|2289|FK506 binding protein 5##U71321|FKBP5|2289|FK506 binding protein 5##NM_001145777|FKBP5|2289|FK506 binding protein 5##NM_004117|FKBP5|2289|FK506 binding protein 5##HM245391|FKBP5|2289|FK506 binding protein 5##AB209893|FKBP5|2289|FK506 binding protein 5##AK058119|C6orf81|221481|chromosome 6 open reading frame 81##BC033033|C6orf81|221481|chromosome 6 open reading frame 81##NM_145028|C6orf81|221481|chromosome 6 open reading frame 81##AY358823|C6orf126|389383|chromosome 6 open reading frame 126##NM_207409|C6orf126|389383|chromosome 6 open reading frame 126##DQ823638|C6orf127|340204|chromosome 6 open reading frame 127##BC150543|C6orf127|340204|chromosome 6 open reading frame 127##BC150544|C6orf127|340204|chromosome 6 open reading frame 127##BC133046|C6orf127|340204|chromosome 6 open reading frame 127##BC137392|C6orf127|340204|chromosome 6 open reading frame 127##NM_001010886|C6orf127|340204|chromosome 6 open reading frame 127	0.904759	CTCF.p2:15:0.905
chr20	38502804	38502948	reg1000396.p1	18.667	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-911887	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-947808	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-947887	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	815001	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1154618	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1154788	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	1.13564	CTCF.p2:36:0.303	CTCF.p2:-40:0.832
chr19	1244524	1244630	reg1000275.p1	18.660	+	TSC_hg19_v1_chr19_+_1241811 BC050458 BC018079 CR542218	-2744	+	TSC_hg19_v1_chr19_+_1241769 BC058927	-2809	+	AK094357 S87916 S87918 X63422 X63423 TSC_hg19_v1_chr19_+_1241766	-2811	+	TSC_hg19_v1_chr19_+_1248581 NM_177401	3997	+	TSC_hg19_v1_chr19_+_1249886 BC060848 BC094778	5307	+	TSC_hg19_v1_chr19_+_1269330 NM_001280 AK095781 AK304185 AK304470 AK311601 AK128423 AF021336 AK094781 D78134 BC000901 BC000403	24728	+	BC050458|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC018079|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##CR542218|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC058927|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##AK094357|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87916|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87918|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63422|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63423|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_177401|MIDN|90007|midnolin##BC060848|MIDN|90007|midnolin##BC094778|MIDN|90007|midnolin##NM_001280|CIRBP|1153|cold inducible RNA binding protein##AK095781|CIRBP|1153|cold inducible RNA binding protein##AK304185|CIRBP|1153|cold inducible RNA binding protein##AK304470|CIRBP|1153|cold inducible RNA binding protein##AK311601|CIRBP|1153|cold inducible RNA binding protein##AK128423|CIRBP|1153|cold inducible RNA binding protein##AF021336|CIRBP|1153|cold inducible RNA binding protein##AK094781|CIRBP|1153|cold inducible RNA binding protein##D78134|CIRBP|1153|cold inducible RNA binding protein##BC000901|CIRBP|1153|cold inducible RNA binding protein##BC000403|CIRBP|1153|cold inducible RNA binding protein	1.014898	CTCF.p2:-20:1.000
chr19	56028356	56028470	reg1000185.p2	18.658	+	TSC_hg19_v1_chr19_+_55999923 EU699476 EU699477	-28486	+	TSC_hg19_v1_chr19_+_55999863 AK092577 AX747607 NM_001144950 NM_001195267	-28549	+	TSC_hg19_v1_chr19_+_55996577 NM_020378 AF086533 BC019079 AB038651	-31841	+	NM_001101401	20021	-	NM_001199824	28495	-	TSC_hg19_v1_chr19_-_56092206 AK092772 AX747719 NM_152600	63801	-	EU699476|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##EU699477|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##AK092577|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##NM_001144950|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##NM_001195267|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##NM_020378|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##AF086533|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##BC019079|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##AB038651|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##NM_001101401|SBK2|646643|SH3-binding domain kinase family, member 2##NM_001199824|SGK110|100130827|putative uncharacterized serine/threonine-protein kinase SgK110-like##AK092772|ZNF579|163033|zinc finger protein 579##NM_152600|ZNF579|163033|zinc finger protein 579	0.389637	CTCF.p2:-13:0.390
chr18	10560572	10560714	reg1000274.p2	18.654	+	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-34546	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-34587	+	TSC_hg19_v1_chr18_+_10526033 AK294038 U78107 AK314495	-34615	+	NM_022068	588117	-	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	1128569	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	1190872	+	CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK294038|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##U78107|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK314495|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.997905	CTCF.p2:-8:0.998
chr3	195923601	195923718	reg1000368.p1	18.653	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-114643	-	TSC_hg19_v1_chr3_-_195808984 M11507	-114676	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-114698	-	BC034801 BC022078 NM_001039617 AK122907	14622	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	19735	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	90876	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.53055	CTCF.p2:12:0.531
chr8	123584648	123584778	reg1000357.p1	18.649	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-931087	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1760207	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1760443	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	209198	+	BC042145 TSC_hg19_v1_chr8_+_123794000	209281	+	TSC_hg19_v1_chr8_+_123794108 AB020661	209390	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.999375	CTCF.p2:21:0.999
chr12	5112297	5112413	reg1000210.p1	18.645	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	-93295	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	-193940	+	AJ271385 NM_017417 BC140888 BC140889	-282587	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	40764	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	428921	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	490983	+	NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3	0.581392	CTCF.p2:18:0.581
chr19	35503987	35504097	reg1000266.p1	18.629	+	AK074914 TSC_hg19_v1_chr19_+_35491368	-12686	+	TSC_hg19_v1_chr19_+_35491226 AK074864 BC014077 NM_001136199 NM_020895	-12778	+	NM_175872 TSC_hg19_v1_chr19_-_35454952	-49084	-	BC067122 NM_001037 NM_199037 L10338 AK295477 L16242 AK313279 AB528721 AY391842 BT019923	17615	+	M18930 NM_002151 NM_182983 X07732	27367	+	TSC_hg19_v1_chr19_+_35532623 BC025716	28584	+	AK074914|GRAMD1A|57655|GRAM domain containing 1A##AK074864|GRAMD1A|57655|GRAM domain containing 1A##BC014077|GRAMD1A|57655|GRAM domain containing 1A##NM_001136199|GRAMD1A|57655|GRAM domain containing 1A##NM_020895|GRAMD1A|57655|GRAM domain containing 1A##NM_175872|ZNF792|126375|zinc finger protein 792##BC067122|SCN1B|6324|sodium channel, voltage-gated, type I, beta##NM_001037|SCN1B|6324|sodium channel, voltage-gated, type I, beta##NM_199037|SCN1B|6324|sodium channel, voltage-gated, type I, beta##L10338|SCN1B|6324|sodium channel, voltage-gated, type I, beta##AK295477|SCN1B|6324|sodium channel, voltage-gated, type I, beta##L16242|SCN1B|6324|sodium channel, voltage-gated, type I, beta##AK313279|SCN1B|6324|sodium channel, voltage-gated, type I, beta##AY391842|SCN1B|6324|sodium channel, voltage-gated, type I, beta##BT019923|SCN1B|6324|sodium channel, voltage-gated, type I, beta##M18930|HPN|3249|hepsin##NM_002151|HPN|3249|hepsin##NM_182983|HPN|3249|hepsin##X07732|HPN|3249|hepsin##BC025716|HPN|3249|hepsin	0.798784	CTCF.p2:10:0.799
chr8	12698279	12698401	reg1000405.p1	18.621	+	TSC_hg19_v1_chr8_-_12612974 NM_152271	-85336	-	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-404436	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-404497	-	AK296010 NM_020844	104826	+	AB040889 NM_001099677	171432	+	AK299049 NM_001164271	275412	-	NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456##AK299049|DLC1|10395|deleted in liver cancer 1##NM_001164271|DLC1|10395|deleted in liver cancer 1	0.994208	CTCF.p2:15:0.994
chrX	73235360	73235490	reg1000508.p1	18.616	+	BC071776 TSC_hg19_v1_chrX_+_73164176 AK056172	-71256	+	TSC_hg19_v1_chrX_+_72783126 AB529212 AK297768 BC050300 AL832095	-452199	+	TSC_hg19_v1_chrX_+_72783043 CR936642 BC127727 BC127728 BC136691 BC136692	-452370	+	TSC_hg19_v1_chrX_-_73512419 AK057701	276980	-	TSC_hg19_v1_chrX_-_73513379 AK311345	277949	-	BC021176 NM_203303 TSC_hg19_v1_chrX_+_73524041 EU446947 EU831786 EU831864 CU676854	288637	+	BC071776|JPX|554203|JPX transcript, XIST activator (non-protein coding)##AK056172|JPX|554203|JPX transcript, XIST activator (non-protein coding)##AK297768|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC050300|CHIC1|53344|cysteine-rich hydrophobic domain 1##AL832095|CHIC1|53344|cysteine-rich hydrophobic domain 1##CR936642|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC127727|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC127728|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC136691|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC136692|CHIC1|53344|cysteine-rich hydrophobic domain 1##AK057701|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##AK311345|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##BC021176|ZCCHC13|389874|zinc finger, CCHC domain containing 13##NM_203303|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU446947|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831786|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831864|ZCCHC13|389874|zinc finger, CCHC domain containing 13	0.978794	CTCF.p2:14:0.979
chr5	149597822	149597949	reg1000256.p1	18.606	+	TSC_hg19_v1_chr5_+_149569812 BC093785 BC113425 BC069631 HQ258340 S80071	-28035	+	AK096607 NM_014228 TSC_hg19_v1_chr5_+_149569631 AK312309 AK308895	-28301	+	TSC_hg19_v1_chr5_+_149546340 NM_001804 AF239666 U51095 BC096249 BC096250 BC096251 BC096252 BC127122 AB463469	-51497	+	AB385410 EU832105 EU832199 AF145710 AF145711 AF091486 TSC_hg19_v1_chr5_-_149669337 BC040457 AB023185 AK308853	71402	-	TSC_hg19_v1_chr5_-_149669400 AK289776 NM_015981 NM_171825	71517	-	AY875937 BC129995 BC129996 TSC_hg19_v1_chr5_-_149682021	84093	-	BC093785|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##BC113425|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##BC069631|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##HQ258340|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##S80071|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK096607|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##NM_014228|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK312309|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK308895|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##NM_001804|CDX1|1044|caudal type homeobox 1##AF239666|CDX1|1044|caudal type homeobox 1##U51095|CDX1|1044|caudal type homeobox 1##BC096249|CDX1|1044|caudal type homeobox 1##BC096250|CDX1|1044|caudal type homeobox 1##BC096251|CDX1|1044|caudal type homeobox 1##BC096252|CDX1|1044|caudal type homeobox 1##BC127122|CDX1|1044|caudal type homeobox 1##EU832105|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##EU832199|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AF145710|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AF145711|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AF091486|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##BC040457|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AB023185|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AK308853|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AK289776|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##NM_015981|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##NM_171825|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AY875937|ARSI|340075|arylsulfatase family, member I##BC129995|ARSI|340075|arylsulfatase family, member I##BC129996|ARSI|340075|arylsulfatase family, member I	0.999758	CTCF.p2:10:1.000
chr7	22528592	22528722	reg1000399.p1	18.605	+	AL833195 NM_012294	-132136	-	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-543175	-	AJ320497 NM_003777	-945825	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	11190	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	238166	+	TSC_hg19_v1_chr7_+_22767104 X04403	238461	+	AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)	0.767608	CTCF.p2:18:0.768
chr1	156355520	156355648	reg1000197.p2	18.599	+	AF193807 AK290840 AK294641 AK303799 AK303814 AY139092 AY139093 NM_020407 AK308556 TSC_hg19_v1_chr1_+_156339022 AK054780 BC065218	-16563	+	TSC_hg19_v1_chr1_-_156308103 NM_001008800 NM_005998	-47432	-	TSC_hg19_v1_chr1_-_156308084 AL833197 AB208882 AK308023	-47508	-	NM_006365 U49857 BC059943 BC107686 BC050448 TSC_hg19_v1_chr1_-_156399219 AK095626 BC054045	43692	-	BC040949 TSC_hg19_v1_chr1_-_156460409	104819	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	114934	-	AF193807|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK290840|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK294641|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303799|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303814|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139092|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139093|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_020407|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK308556|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK054780|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##BC065218|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_001008800|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_005998|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AL833197|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AB208882|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK308023|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_006365|C1orf61|10485|chromosome 1 open reading frame 61##U49857|C1orf61|10485|chromosome 1 open reading frame 61##BC059943|C1orf61|10485|chromosome 1 open reading frame 61##BC107686|C1orf61|10485|chromosome 1 open reading frame 61##BC050448|C1orf61|10485|chromosome 1 open reading frame 61##AK095626|C1orf61|10485|chromosome 1 open reading frame 61##BC054045|C1orf61|10485|chromosome 1 open reading frame 61##BC040949|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D	0.999462	CTCF.p2:-11:0.999
chr11	120100623	120100766	reg1000609.p3	18.592	+	TSC_hg19_v1_chr11_+_120081739 BC047726 NM_178507 BC008339	-18981	+	TSC_hg19_v1_chr11_-_120008858 AF230388 AF230389 L24203 NM_012101	-91839	-	BC017352 BC010644 TSC_hg19_v1_chr11_-_120008822 AK223090 AK122720	-91882	-	AK302212 NM_001244682	6654	+	AK291993 NM_014352 AF162278 BC101649 BC143593 BC143594 BC143595 AF133895 AJ012214 EU446698	10283	+	AK128040 NM_001198670 NM_001198671 NM_001198672 NM_001198673 NM_001198674 NM_001198675 NM_174926	95143	+	BC047726|OAF|220323|OAF homolog (Drosophila)##NM_178507|OAF|220323|OAF homolog (Drosophila)##BC008339|OAF|220323|OAF homolog (Drosophila)##AF230388|TRIM29|23650|tripartite motif containing 29##AF230389|TRIM29|23650|tripartite motif containing 29##L24203|TRIM29|23650|tripartite motif containing 29##NM_012101|TRIM29|23650|tripartite motif containing 29##BC017352|TRIM29|23650|tripartite motif containing 29##BC010644|TRIM29|23650|tripartite motif containing 29##AK223090|TRIM29|23650|tripartite motif containing 29##AK122720|TRIM29|23650|tripartite motif containing 29##AK302212|POU2F3|25833|POU class 2 homeobox 3##NM_001244682|POU2F3|25833|POU class 2 homeobox 3##AK291993|POU2F3|25833|POU class 2 homeobox 3##NM_014352|POU2F3|25833|POU class 2 homeobox 3##AF162278|POU2F3|25833|POU class 2 homeobox 3##BC101649|POU2F3|25833|POU class 2 homeobox 3##BC143593|POU2F3|25833|POU class 2 homeobox 3##BC143594|POU2F3|25833|POU class 2 homeobox 3##BC143595|POU2F3|25833|POU class 2 homeobox 3##AF133895|POU2F3|25833|POU class 2 homeobox 3##AJ012214|POU2F3|25833|POU class 2 homeobox 3##EU446698|POU2F3|25833|POU class 2 homeobox 3##AK128040|TMEM136|219902|transmembrane protein 136##NM_001198670|TMEM136|219902|transmembrane protein 136##NM_001198671|TMEM136|219902|transmembrane protein 136##NM_001198672|TMEM136|219902|transmembrane protein 136##NM_001198673|TMEM136|219902|transmembrane protein 136##NM_001198674|TMEM136|219902|transmembrane protein 136##NM_001198675|TMEM136|219902|transmembrane protein 136##NM_174926|TMEM136|219902|transmembrane protein 136	0.753032	CTCF.p2:4:0.573
chr8	86202466	86202583	reg1000380.p1	18.585	+	TSC_hg19_v1_chr8_+_86158033 CU690924	-44475	+	TSC_hg19_v1_chr8_+_86158005 AK095314	-44519	+	TSC_hg19_v1_chr8_+_86157743 BC052602	-44781	+	CU693312 DQ890930 DQ894091 X05014 NM_001164830	51378	-	BC027890 NM_001128829 NM_001128830 NM_001128831 NM_001738	87813	-	AK096880 NM_005181 TSC_hg19_v1_chr8_+_86351055 AK300670 AK300677 AK313254 BC004897 CU678792	148572	+	AK095314|CA13|377677|carbonic anhydrase XIII##BC052602|CA13|377677|carbonic anhydrase XIII##DQ890930|CA1|759|carbonic anhydrase I##DQ894091|CA1|759|carbonic anhydrase I##X05014|CA1|759|carbonic anhydrase I##NM_001164830|CA1|759|carbonic anhydrase I##BC027890|CA1|759|carbonic anhydrase I##NM_001128829|CA1|759|carbonic anhydrase I##NM_001128830|CA1|759|carbonic anhydrase I##NM_001128831|CA1|759|carbonic anhydrase I##NM_001738|CA1|759|carbonic anhydrase I##AK096880|CA3|761|carbonic anhydrase III, muscle specific##NM_005181|CA3|761|carbonic anhydrase III, muscle specific##AK300670|CA3|761|carbonic anhydrase III, muscle specific##AK300677|CA3|761|carbonic anhydrase III, muscle specific##AK313254|CA3|761|carbonic anhydrase III, muscle specific##BC004897|CA3|761|carbonic anhydrase III, muscle specific	0.950682	CTCF.p2:15:0.951
chr5	177591291	177591414	reg1000267.p1	18.584	+	TSC_hg19_v1_chr5_-_177580916 NM_001034833 NM_017838	-10416	-	CR457238 AF401219 TSC_hg19_v1_chr5_-_177580868 AK000486 BC000009 AF161404 AJ293309 BC006387	-10495	-	TSC_hg19_v1_chr5_+_177558026 BC009911 DQ494789 NM_022762	-33320	+	TSC_hg19_v1_chr5_+_177631530 AK097657 NM_004499 NM_031266	40162	+	AK054600 TSC_hg19_v1_chr5_+_177631533	40181	+	AK223425 TSC_hg19_v1_chr5_+_177631534 BC004561 BC009359 BC001616 BC002625 BC015556 BC036708 M65028	40220	+	NM_001034833|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##NM_017838|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##CR457238|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AF401219|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AK000486|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##BC000009|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AF161404|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AJ293309|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##BC006387|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##BC009911|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##DQ494789|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##NM_022762|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK097657|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##NM_004499|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##NM_031266|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##AK054600|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##AK223425|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##BC004561|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##BC009359|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##BC001616|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##BC002625|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##BC015556|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##BC036708|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##M65028|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	0.960483	CTCF.p2:12:0.960
chr16	67011701	67011826	reg1000413.p1	18.583	+	AK025389 NM_001185176	-10386	+	TSC_hg19_v1_chr16_+_66995159 AK097538 NM_001185177 NM_024922 BC053670 AK000105 AY358609	-16611	+	AM392781 AB527125 DQ893022 DQ896756 BC098417 BC071874 TSC_hg19_v1_chr16_+_66969468 AK222724 Y09616 D50579 U60553	-42308	+	AK293061 NM_173815 AK296064	10766	+	NM_001190201 NM_001190202 TSC_hg19_v1_chr16_+_67034441 AK094783 AK300792 AK295483 BC041823 BC064573	22785	+	TSC_hg19_v1_chr16_+_67063051 BC018509 NM_001755 NM_022845	51284	+	AK025389|CES3|23491|carboxylesterase 3##NM_001185176|CES3|23491|carboxylesterase 3##AK097538|CES3|23491|carboxylesterase 3##NM_001185177|CES3|23491|carboxylesterase 3##NM_024922|CES3|23491|carboxylesterase 3##BC053670|CES3|23491|carboxylesterase 3##AK000105|CES3|23491|carboxylesterase 3##AY358609|CES3|23491|carboxylesterase 3##AM392781|CES2|8824|carboxylesterase 2##DQ893022|CES2|8824|carboxylesterase 2##DQ896756|CES2|8824|carboxylesterase 2##BC098417|CES2|8824|carboxylesterase 2##BC071874|CES2|8824|carboxylesterase 2##AK222724|CES2|8824|carboxylesterase 2##Y09616|CES2|8824|carboxylesterase 2##D50579|CES2|8824|carboxylesterase 2##U60553|CES2|8824|carboxylesterase 2##AK293061|CES4A|283848|carboxylesterase 4A##NM_173815|CES4A|283848|carboxylesterase 4A##AK296064|CES4A|283848|carboxylesterase 4A##NM_001190201|CES4A|283848|carboxylesterase 4A##NM_001190202|CES4A|283848|carboxylesterase 4A##AK094783|CES4A|283848|carboxylesterase 4A##AK300792|CES4A|283848|carboxylesterase 4A##AK295483|CES4A|283848|carboxylesterase 4A##BC041823|CES4A|283848|carboxylesterase 4A##BC064573|CES4A|283848|carboxylesterase 4A##BC018509|CBFB|865|core-binding factor, beta subunit##NM_001755|CBFB|865|core-binding factor, beta subunit##NM_022845|CBFB|865|core-binding factor, beta subunit	0.972353	CTCF.p2:-15:0.972
chr9	134211739	134211873	reg1000432.p1	18.581	+	TSC_hg19_v1_chr9_+_134165108 AK075207 NM_032728 BC006362 AK027568 AK315502 AB385550	-46578	+	BC049388 NM_033387 AK095423	-59887	-	TSC_hg19_v1_chr9_+_134001016 D14689 AB159230	-210756	+	TSC_hg19_v1_chr9_+_134269515 BC002872	57760	+	NM_013318 TSC_hg19_v1_chr9_+_134305488	93676	+	CU678266 TSC_hg19_v1_chr9_+_134305548	93734	+	AK075207|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##NM_032728|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC006362|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK027568|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK315502|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC049388|FAM78A|286336|family with sequence similarity 78, member A##NM_033387|FAM78A|286336|family with sequence similarity 78, member A##AK095423|FAM78A|286336|family with sequence similarity 78, member A##D14689|NUP214|8021|nucleoporin 214kDa##AB159230|NUP214|8021|nucleoporin 214kDa##BC002872|PRRC2B|84726|proline-rich coiled-coil 2B##NM_013318|PRRC2B|84726|proline-rich coiled-coil 2B	0.998485	CTCF.p2:9:0.998
chr5	131722373	131722520	reg1000420.p1	18.578	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-16938	+	BX538252 TSC_hg19_v1_chr5_-_131705330	-17147	-	TSC_hg19_v1_chr5_-_131630942 BC030525	-91473	-	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	24182	+	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	104035	-	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	156746	-	NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BX538252|LOC553103|553103|uncharacterized LOC553103##AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	0.989276	CTCF.p2:-14:0.979
chr8	17557181	17557312	reg1000481.p1	18.576	+	AF293357 BC017740 AK314692 BC098381 BC142971 FJ472827 AK289750 NM_020749	-2045	-	D37965 TSC_hg19_v1_chr8_+_17434724 BC010927 AB529173 CR541952 CU679854 DQ892944 DQ896192	-122516	+	AK289450 NM_006207	-123305	+	AK125188 FJ472826 NM_001001931	22483	-	AK294860 NM_001166393	22807	-	AY363099 AK310871 NM_001001924 NM_001001925 FJ458441 TSC_hg19_v1_chr8_-_17658604	101249	-	AF293357|MTUS1|57509|microtubule associated tumor suppressor 1##BC017740|MTUS1|57509|microtubule associated tumor suppressor 1##AK314692|MTUS1|57509|microtubule associated tumor suppressor 1##BC098381|MTUS1|57509|microtubule associated tumor suppressor 1##BC142971|MTUS1|57509|microtubule associated tumor suppressor 1##FJ472827|MTUS1|57509|microtubule associated tumor suppressor 1##AK289750|MTUS1|57509|microtubule associated tumor suppressor 1##NM_020749|MTUS1|57509|microtubule associated tumor suppressor 1##D37965|PDGFRL|5157|platelet-derived growth factor receptor-like##BC010927|PDGFRL|5157|platelet-derived growth factor receptor-like##CR541952|PDGFRL|5157|platelet-derived growth factor receptor-like##DQ892944|PDGFRL|5157|platelet-derived growth factor receptor-like##DQ896192|PDGFRL|5157|platelet-derived growth factor receptor-like##AK289450|PDGFRL|5157|platelet-derived growth factor receptor-like##NM_006207|PDGFRL|5157|platelet-derived growth factor receptor-like##AK125188|MTUS1|57509|microtubule associated tumor suppressor 1##FJ472826|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1##AK294860|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1##AY363099|MTUS1|57509|microtubule associated tumor suppressor 1##AK310871|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001001924|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001001925|MTUS1|57509|microtubule associated tumor suppressor 1##FJ458441|MTUS1|57509|microtubule associated tumor suppressor 1	0.964273	CTCF.p2:0:0.964
chr11	76029926	76030064	reg1000456.p1	18.575	+	TSC_hg19_v1_chr11_-_75921806 AK075540	-108191	-	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	-112483	-	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	-503717	+	TSC_hg19_v1_chr11_-_76091995 AB590785 AF007393 AF081567 HQ258648 NM_004705 AK291843 BC117138 BC117140 BC110304	62013	-	TSC_hg19_v1_chr11_+_76092383 AK125821 BC040665 AK095089	62428	+	TSC_hg19_v1_chr11_-_76155721 AK054718	125730	-	AK075540|WNT11|7481|wingless-type MMTV integration site family, member 11##BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11##BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	0.994749	CTCF.p2:16:0.995
chr9	130266382	130266500	reg1000513.p1	18.573	+	BC009239 NM_001005374	-51908	+	NM_001005373 NM_001190723 TSC_hg19_v1_chr9_+_130213788 AK056203 NM_138361 AK226106 AY358830	-52657	+	BC059950 BC094831 BC050644 BC071921 L06505 AF037643 AB209471 AK026526 AK057602 BC105603 D28443 NM_000976	-52761	-	AB210016 BC067366 TSC_hg19_v1_chr9_-_130331266	64764	-	TSC_hg19_v1_chr9_-_130331353 BC110345 NM_022833 AF192911	64954	-	TSC_hg19_v1_chr9_-_130341311 AF151783 NM_001035534	74847	-	BC009239|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001005374|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001005373|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001190723|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AK056203|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_138361|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AK226106|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AY358830|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##BC059950|RPL12|6136|ribosomal protein L12##BC094831|RPL12|6136|ribosomal protein L12##BC050644|RPL12|6136|ribosomal protein L12##L06505|RPL12|6136|ribosomal protein L12##AB209471|RPL12|6136|ribosomal protein L12##AK026526|RPL12|6136|ribosomal protein L12##AK057602|RPL12|6136|ribosomal protein L12##BC105603|RPL12|6136|ribosomal protein L12##D28443|RPL12|6136|ribosomal protein L12##NM_000976|RPL12|6136|ribosomal protein L12##AB210016|FAM129B|64855|family with sequence similarity 129, member B##BC067366|FAM129B|64855|family with sequence similarity 129, member B##BC110345|FAM129B|64855|family with sequence similarity 129, member B##NM_022833|FAM129B|64855|family with sequence similarity 129, member B##AF192911|FAM129B|64855|family with sequence similarity 129, member B##AF151783|FAM129B|64855|family with sequence similarity 129, member B##NM_001035534|FAM129B|64855|family with sequence similarity 129, member B	0.999367	CTCF.p2:-9:0.999
chr21	35882957	35883070	reg1000251.p2	18.565	+	AK311384 AY789479 EU008568 EU008569 AK313543 BC036452 NM_001127668 NM_001127669	-51135	-	AY789480 NM_001127670 EU008570	-54941	-	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	-135188	+	AK304336 NM_000219 BC069055	639	-	TSC_hg19_v1_chr21_-_35884509 AK095442 BC046224	1524	-	CR542065 AK299444 TSC_hg19_v1_chr21_-_35899121 AK293293 U85267 NM_203418	16140	-	AK311384|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AY789479|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008568|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008569|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK313543|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC036452|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127668|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127669|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AK304336|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_000219|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC069055|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK095442|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC046224|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##CR542065|RCAN1|1827|regulator of calcineurin 1##AK299444|RCAN1|1827|regulator of calcineurin 1##AK293293|RCAN1|1827|regulator of calcineurin 1##U85267|RCAN1|1827|regulator of calcineurin 1##NM_203418|RCAN1|1827|regulator of calcineurin 1	0.287851	CTCF.p2:-4:0.244
chr1	110648856	110648977	reg1000375.p1	18.559	+	AF008203 BC112007 BC113428 NM_006492	-35639	-	AK291059 TSC_hg19_v1_chr1_+_110577249 AL834196 AB051548 AB463038	-71663	+	BC094786 TSC_hg19_v1_chr1_+_110577243	-71674	+	AK098556 NM_203412 BC058929	6159	+	NM_001010898 AK289982 TSC_hg19_v1_chr1_+_110693135	44218	+	TSC_hg19_v1_chr1_+_110753347 NM_001039574 NM_004978	104428	+	AF008203|ALX3|257|ALX homeobox 3##BC112007|ALX3|257|ALX homeobox 3##BC113428|ALX3|257|ALX homeobox 3##NM_006492|ALX3|257|ALX homeobox 3##AK291059|FAM40A|85369|family with sequence similarity 40, member A##AL834196|FAM40A|85369|family with sequence similarity 40, member A##AB051548|FAM40A|85369|family with sequence similarity 40, member A##BC094786|FAM40A|85369|family with sequence similarity 40, member A##AK098556|UBL4B|164153|ubiquitin-like 4B##NM_203412|UBL4B|164153|ubiquitin-like 4B##BC058929|UBL4B|164153|ubiquitin-like 4B##NM_001010898|SLC6A17|388662|solute carrier family 6, member 17##AK289982|SLC6A17|388662|solute carrier family 6, member 17##NM_001039574|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_004978|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4	0.987187	CTCF.p2:12:0.987
chr11	19575401	19575525	reg1000356.p1	18.552	+	AB063115 NM_001111018 AJ488205	-203148	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-312262	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-312988	-	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	159403	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	468925	+	TSC_hg19_v1_chr11_+_20049136 AK307574	473669	+	AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2	1.011238	CTCF.p2:15:1.000
chr2	20298043	20298169	reg1000445.p1	18.538	+	NM_014713	-46318	-	TSC_hg19_v1_chr2_-_20251415 AY359028 D14696 BC003158 AK129875	-46679	-	CR456758 TSC_hg19_v1_chr2_-_20251382 BC000421 AK304433 BC093075	-46768	-	X60306 AB464260 CU679093 DQ893265 DQ896595 TSC_hg19_v1_chr2_-_20424892 AK299385 J05392 AK313974 AK222739 BC008765 AJ551176 AK311409 NM_002997	126681	-	TSC_hg19_v1_chr2_-_20425168 NM_001006946	127073	-	AF272350 TSC_hg19_v1_chr2_-_20512079	213943	-	NM_014713|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AY359028|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##D14696|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC003158|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK129875|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##CR456758|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC000421|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK304433|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC093075|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##X60306|SDC1|6382|syndecan 1##DQ893265|SDC1|6382|syndecan 1##DQ896595|SDC1|6382|syndecan 1##AK299385|SDC1|6382|syndecan 1##J05392|SDC1|6382|syndecan 1##AK313974|SDC1|6382|syndecan 1##AK222739|SDC1|6382|syndecan 1##BC008765|SDC1|6382|syndecan 1##AJ551176|SDC1|6382|syndecan 1##NM_002997|SDC1|6382|syndecan 1##NM_001006946|SDC1|6382|syndecan 1##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)	0.401958	CTCF.p2:8:0.402
chr16	28328507	28328638	reg1000595.p1	18.536	+	TSC_hg19_v1_chr16_+_28303845 AY874862 NM_001024401	-24791	+	TSC_hg19_v1_chr16_-_28303389 AK091456 AX746995	-25194	-	TSC_hg19_v1_chr16_-_28223181 AB002368 NM_015171	-105397	-	DQ891632 DQ894822 AB527254 BC157849 BC071705 AK000739 AK293264 AY762099 TSC_hg19_v1_chr16_-_28415133 BC000533 BC001571	86469	-	AK055366 AK299421 AK303790 AK304500 TSC_hg19_v1_chr16_-_28415162 AK301233 AK301183 NM_001099661 BC107692 NM_001037808 NM_003752	86585	-	BC157842 AK292155 NM_001199142	109146	-	AY874862|SBK1|388228|SH3-binding domain kinase 1##NM_001024401|SBK1|388228|SH3-binding domain kinase 1##AB002368|XPO6|23214|exportin 6##NM_015171|XPO6|23214|exportin 6##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C	0.994254	CTCF.p2:4:0.994
chr17	55320598	55320730	reg1000437.p1	18.528	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-157521	+	TSC_hg19_v1_chr17_+_55162639 NM_003488 BC000729 X97335	-158050	+	NM_021626 TSC_hg19_v1_chr17_+_55055513 AY358559 AF282618 AK027373 BC010078 AK298161 CU687218 BC072405 AF113214	-265160	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	13309	+	AK093888 AX748353 NM_170721	13709	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	606740	-	NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_003488|AKAP1|8165|A kinase (PRKA) anchor protein 1##BC000729|AKAP1|8165|A kinase (PRKA) anchor protein 1##X97335|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_021626|SCPEP1|59342|serine carboxypeptidase 1##AY358559|SCPEP1|59342|serine carboxypeptidase 1##AF282618|SCPEP1|59342|serine carboxypeptidase 1##AK027373|SCPEP1|59342|serine carboxypeptidase 1##BC010078|SCPEP1|59342|serine carboxypeptidase 1##AK298161|SCPEP1|59342|serine carboxypeptidase 1##BC072405|SCPEP1|59342|serine carboxypeptidase 1##AF113214|SCPEP1|59342|serine carboxypeptidase 1##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23	1.43865	CTCF.p2:22:0.441	CTCF.p2:-28:0.997
chr18	56724562	56724687	reg1000100.p2	18.519	+	TSC_hg19_v1_chr18_+_56531281 BC036366	-193275	+	TSC_hg19_v1_chr18_+_56530714 AB046849	-193769	+	NM_018181 AF295077 BC130618 BC130620	-194505	+	TSC_hg19_v1_chr18_+_56807119 AK314107 AF212233 AK311213 NM_033280 AK295346 AK307127 BC009703 CU679449	82523	+	TSC_hg19_v1_chr18_+_56887389 AK307264 BC004488 NM_001012512 NM_001012513 NM_002091 K02054 DQ893451 DQ896223 AB528662 AB102889 BT006803	162819	+	BC051901 AF115392 NM_013435 AB593018	216030	-	BC036366|ZNF532|55205|zinc finger protein 532##AB046849|ZNF532|55205|zinc finger protein 532##NM_018181|ZNF532|55205|zinc finger protein 532##AF295077|ZNF532|55205|zinc finger protein 532##BC130618|ZNF532|55205|zinc finger protein 532##BC130620|ZNF532|55205|zinc finger protein 532##AK314107|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AF212233|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##NM_033280|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK295346|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307127|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##BC009703|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307264|GRP|2922|gastrin-releasing peptide##BC004488|GRP|2922|gastrin-releasing peptide##NM_001012512|GRP|2922|gastrin-releasing peptide##NM_001012513|GRP|2922|gastrin-releasing peptide##NM_002091|GRP|2922|gastrin-releasing peptide##K02054|GRP|2922|gastrin-releasing peptide##DQ893451|GRP|2922|gastrin-releasing peptide##DQ896223|GRP|2922|gastrin-releasing peptide##AB102889|GRP|2922|gastrin-releasing peptide##BT006803|GRP|2922|gastrin-releasing peptide##BC051901|RAX|30062|retina and anterior neural fold homeobox##AF115392|RAX|30062|retina and anterior neural fold homeobox##NM_013435|RAX|30062|retina and anterior neural fold homeobox##AB593018|RAX|30062|retina and anterior neural fold homeobox	1.180196	CTCF.p2:5:0.915	CTCF.p2:106:0.265
chr1	40439298	40439429	reg1000455.p1	18.514	+	TSC_hg19_v1_chr1_+_40420841 BC092414 BC069694 BC069771 AK074186 CU679972	-18463	+	TSC_hg19_v1_chr1_+_40420821 BC011587 AK075183 AK301533 AB073383 AK027396 AK297991 AK093223 AK291540 AX747998 AF289609 AL834184	-18545	+	TSC_hg19_v1_chr1_+_40420783 NM_001136493 NM_032793	-18578	+	NM_001105530 NM_006367 TSC_hg19_v1_chr1_+_40506299	66914	+	TSC_hg19_v1_chr1_+_40506349 AK315731	66986	+	TSC_hg19_v1_chr1_+_40506400 AK297829 AK300861 AK096193	67030	+	BC092414|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK074186|MFSD2A|84879|major facilitator superfamily domain containing 2A##BC011587|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK075183|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK301533|MFSD2A|84879|major facilitator superfamily domain containing 2A##AB073383|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK027396|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK297991|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK093223|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK291540|MFSD2A|84879|major facilitator superfamily domain containing 2A##AF289609|MFSD2A|84879|major facilitator superfamily domain containing 2A##AL834184|MFSD2A|84879|major facilitator superfamily domain containing 2A##NM_001136493|MFSD2A|84879|major facilitator superfamily domain containing 2A##NM_032793|MFSD2A|84879|major facilitator superfamily domain containing 2A##NM_001105530|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##NM_006367|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK315731|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK297829|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK300861|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK096193|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)	0.999364	CTCF.p2:1:0.999
chr9	126889221	126889366	reg1000523.p1	18.509	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-115222	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-115410	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-196982	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	130717	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	130952	+	TSC_hg19_v1_chr9_+_127020255 AB026289	130971	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.986895	CTCF.p2:-14:0.987
chr1	154642285	154642416	reg1000140.p1	18.508	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-41885	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-41936	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-61650	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	189912	-	BX649146 TSC_hg19_v1_chr1_-_154840541	198151	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	200396	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.91907	CTCF.p2:-13:0.919
chr11	73062353	73062482	reg1000515.p1	18.503	+	TSC_hg19_v1_chr11_-_73020422 AK300095	-41994	-	BC137228 NM_014786 AF378754	-42752	+	TSC_hg19_v1_chr11_+_73019337 AK074500	-43013	+	TSC_hg19_v1_chr11_+_73087471 AK027899 NM_152222 BC051810 BC017279	25020	+	TSC_hg19_v1_chr11_+_73087683 AF319553 NM_032871	25274	+	D87470 TSC_hg19_v1_chr11_-_73309158 AK292054 EF197985 BC052341 EF363480 NM_015159	246781	-	AK300095|LOC100287837|100287837|uncharacterized LOC100287837##BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK027899|RELT|84957|RELT tumor necrosis factor receptor##NM_152222|RELT|84957|RELT tumor necrosis factor receptor##BC051810|RELT|84957|RELT tumor necrosis factor receptor##BC017279|RELT|84957|RELT tumor necrosis factor receptor##AF319553|RELT|84957|RELT tumor necrosis factor receptor##NM_032871|RELT|84957|RELT tumor necrosis factor receptor##D87470|FAM168A|23201|family with sequence similarity 168, member A##AK292054|FAM168A|23201|family with sequence similarity 168, member A##EF197985|FAM168A|23201|family with sequence similarity 168, member A##BC052341|FAM168A|23201|family with sequence similarity 168, member A##EF363480|FAM168A|23201|family with sequence similarity 168, member A##NM_015159|FAM168A|23201|family with sequence similarity 168, member A	0.989992	CTCF.p2:-8:0.990
chr17	7039658	7039808	reg1000539.p1	18.502	+	X55283 TSC_hg19_v1_chr17_-_7018083 BC017251 NM_001181 NM_001201352 NM_080912 NM_080913 AK310123 AK303787	-21563	-	X55284 TSC_hg19_v1_chr17_-_7018008 M11025	-21744	-	AF529374 U97197 AB528625 CU677885 DQ892652 DQ895891 NM_080914	-22140	-	BC032130 TSC_hg19_v1_chr17_-_7082568	42831	-	M10058 AB070933 TSC_hg19_v1_chr17_-_7082680 AK308375 AK124286 NM_001197216 NM_001671	43035	-	TSC_hg19_v1_chr17_-_7106561 BC040533	66861	-	X55283|ASGR2|433|asialoglycoprotein receptor 2##BC017251|ASGR2|433|asialoglycoprotein receptor 2##NM_001181|ASGR2|433|asialoglycoprotein receptor 2##NM_001201352|ASGR2|433|asialoglycoprotein receptor 2##NM_080912|ASGR2|433|asialoglycoprotein receptor 2##NM_080913|ASGR2|433|asialoglycoprotein receptor 2##AK310123|ASGR2|433|asialoglycoprotein receptor 2##AK303787|ASGR2|433|asialoglycoprotein receptor 2##X55284|ASGR2|433|asialoglycoprotein receptor 2##M11025|ASGR2|433|asialoglycoprotein receptor 2##AF529374|ASGR2|433|asialoglycoprotein receptor 2##U97197|ASGR2|433|asialoglycoprotein receptor 2##DQ892652|ASGR2|433|asialoglycoprotein receptor 2##DQ895891|ASGR2|433|asialoglycoprotein receptor 2##NM_080914|ASGR2|433|asialoglycoprotein receptor 2##BC032130|ASGR1|432|asialoglycoprotein receptor 1##M10058|ASGR1|432|asialoglycoprotein receptor 1##AB070933|ASGR1|432|asialoglycoprotein receptor 1##AK308375|ASGR1|432|asialoglycoprotein receptor 1##AK124286|ASGR1|432|asialoglycoprotein receptor 1##NM_001197216|ASGR1|432|asialoglycoprotein receptor 1##NM_001671|ASGR1|432|asialoglycoprotein receptor 1##BC040533|DLG4|1742|discs, large homolog 4 (Drosophila)	0.61492	CTCF.p2:14:0.615
chr2	20861365	20861489	reg1000457.p1	18.494	+	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	-10579	-	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-214595	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-311008	-	AF522369 NM_182828	4996	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	161426	-	M36676 TSC_hg19_v1_chr2_-_21225654 M31030	364266	-	BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43##M36676|APOB|338|apolipoprotein B (including Ag(x) antigen)##M31030|APOB|338|apolipoprotein B (including Ag(x) antigen)	0.999433	CTCF.p2:-6:0.999
chr1	204415642	204415770	reg1000355.p2	18.489	+	TSC_hg19_v1_chr1_-_204380946 BC065280 AK222877 NM_032833 AK027650 AK303535 AK316092	-34766	-	TSC_hg19_v1_chr1_+_204380508 BC009873	-35185	+	AB023186 BC152475 NM_014935 TSC_hg19_v1_chr1_-_204329058	-86656	-	BC132876 BC136645 BC144342 NM_002646 AK308153	43792	-	TSC_hg19_v1_chr1_-_204463934 BC094741	48059	-	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	69796	+	BC065280|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK222877|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_032833|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK027650|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK303535|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AB023186|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC152475|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##NM_014935|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC132876|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC136645|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC144342|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_002646|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AK308153|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	0.998696	CTCF.p2:-14:0.999
chr7	25605624	25605757	reg1000480.p1	18.486	+	AB040290 AF330057 AF440392 NM_022150	-337610	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-385819	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-440750	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	586243	+	TSC_hg19_v1_chr7_-_26232151 BX538099	626461	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	634651	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	1.671766	CTCF.p2:17:0.675	CTCF.p2:-26:0.996
chr11	75156499	75156633	reg1000441.p1	18.484	+	TSC_hg19_v1_chr11_-_75141540 NM_001039548	-14971	-	TSC_hg19_v1_chr11_-_75141247 BC042952 BC057763	-15335	-	HQ258227 BC132708 BC132710 TSC_hg19_v1_chr11_-_75141083 AK091109 AX746783	-15506	-	BC090053 AF318351 NM_030792	79942	-	AF318377 TSC_hg19_v1_chr11_-_75236890	80312	-	NM_001207014 NM_001235 TSC_hg19_v1_chr11_+_75273168 AK290124	116569	+	NM_001039548|KLHL35|283212|kelch-like 35 (Drosophila)##BC042952|KLHL35|283212|kelch-like 35 (Drosophila)##BC057763|KLHL35|283212|kelch-like 35 (Drosophila)##HQ258227|KLHL35|283212|kelch-like 35 (Drosophila)##BC132708|KLHL35|283212|kelch-like 35 (Drosophila)##BC132710|KLHL35|283212|kelch-like 35 (Drosophila)##AK091109|KLHL35|283212|kelch-like 35 (Drosophila)##BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##AF318377|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##NM_001207014|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##NM_001235|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK290124|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)	0.678401	CTCF.p2:-17:0.678
chr1	23871328	23871457	reg1000414.p1	18.479	+	L22846 NM_004091	-13681	-	BT019523 AB463593 BC053676 AK313939 TSC_hg19_v1_chr1_-_23857464	-14017	-	TSC_hg19_v1_chr1_-_23810732 NM_001143778 NM_017707	-60655	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	14592	-	NM_002167 X69111	14892	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	146888	+	L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##BT019523|E2F2|1870|E2F transcription factor 2##BC053676|E2F2|1870|E2F transcription factor 2##AK313939|E2F2|1870|E2F transcription factor 2##NM_001143778|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##NM_017707|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11	0.841428	CTCF.p2:-20:0.841
chr19	43033519	43033640	reg1000348.p2	18.479	+	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	-987	-	X16356 TSC_hg19_v1_chr19_-_43031473	-2170	-	BC093946 BC112095 AK292985 AY358433 NM_198477 AY598464	-86455	-	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	65451	-	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	211022	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	236245	-	M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17##BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17##NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17##DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8	0.790504	CTCF.p2:15:0.791
chr2	232422702	232422823	reg1000278.p2	18.471	+	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	-27608	-	BC033054 TSC_hg19_v1_chr2_-_232379076	-43680	-	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	-93527	-	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	34855	+	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	150472	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	150570	+	AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin##NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha	0.834334	CTCF.p2:25:0.824
chr15	55582752	55582877	reg1000032.p3	18.470	+	TSC_hg19_v1_chr15_-_55582012 AK312836 NM_183235	-823	-	BC132800 BC136423 BC107680 NM_183236	-19716	-	AF125393 NM_183234 U57094 U38654 NM_004580	-20277	-	NM_004855 AK293666 AK314706 BC017711	28349	+	TSC_hg19_v1_chr15_-_55611322 AB593170	28526	-	D42138 TSC_hg19_v1_chr15_+_55611429 AK223330	28610	+	AK312836|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183235|RAB27A|5873|RAB27A, member RAS oncogene family##BC132800|RAB27A|5873|RAB27A, member RAS oncogene family##BC136423|RAB27A|5873|RAB27A, member RAS oncogene family##BC107680|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183236|RAB27A|5873|RAB27A, member RAS oncogene family##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004855|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK293666|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK314706|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##BC017711|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##D42138|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK223330|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B	0.579808	CTCF.p2:9:0.580
chr15	37398686	37398820	reg1000511.p1	18.469	+	TSC_hg19_v1_chr15_-_37393466 BC050431 NM_001220482 NM_002399 BC001516 BC001844 BC007202 AK300247	-5311	-	TSC_hg19_v1_chr15_-_37392751 AK056216 NM_170674 NM_170675 NM_170676 NM_170677	-6197	-	TSC_hg19_v1_chr15_-_37392322 AK226072	-6422	-	BC029221 NM_152453	828703	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	1145642	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	1146269	+	BC050431|MEIS2|4212|Meis homeobox 2##NM_001220482|MEIS2|4212|Meis homeobox 2##NM_002399|MEIS2|4212|Meis homeobox 2##BC001516|MEIS2|4212|Meis homeobox 2##BC001844|MEIS2|4212|Meis homeobox 2##BC007202|MEIS2|4212|Meis homeobox 2##AK300247|MEIS2|4212|Meis homeobox 2##AK056216|MEIS2|4212|Meis homeobox 2##NM_170674|MEIS2|4212|Meis homeobox 2##NM_170675|MEIS2|4212|Meis homeobox 2##NM_170676|MEIS2|4212|Meis homeobox 2##NM_170677|MEIS2|4212|Meis homeobox 2##AK226072|MEIS2|4212|Meis homeobox 2##BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1	0.026777	
chr7	65187390	65187515	reg1000417.p1	18.466	+	TSC_hg19_v1_chr7_+_64838793 AK091618 AX747097 BC036439 M61872	-348645	+	TSC_hg19_v1_chr7_+_64838761 BX647875 NM_007139 NM_152626 BC040594	-348702	+	TSC_hg19_v1_chr7_+_64601445 AK057766	-585932	+	TSC_hg19_v1_chr7_-_65215912 BX647963	28466	-	TSC_hg19_v1_chr7_+_65216060 BC052238 BC073761 BC122874 BC119782	28631	+	TSC_hg19_v1_chr7_-_65235746 BC066990	48293	-	AK091618|ZNF92|168374|zinc finger protein 92##BC036439|ZNF92|168374|zinc finger protein 92##M61872|ZNF92|168374|zinc finger protein 92##BX647875|ZNF92|168374|zinc finger protein 92##NM_007139|ZNF92|168374|zinc finger protein 92##NM_152626|ZNF92|168374|zinc finger protein 92##BC040594|ZNF92|168374|zinc finger protein 92##AK057766|INTS4L1|285905|integrator complex subunit 4-like 1##BC052238|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC073761|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC122874|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC119782|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC066990|LOC441242|441242|uncharacterized LOC441242	0.996001	CTCF.p2:-13:0.996
chr1	155176754	155176883	reg1000532.p1	18.465	+	AF125525 AY466157 X80761 S81781 AF348143 AY327582 AY327583 AY327584 AY327585 AY327586 AY327589 AY327590 AY327591 AY327592 AY327595 AY327597 AY327598 AY327599 AY327600 S81736 U60259 U60260 U60261 X52228 X52229 BC120974 BC120975 AY327587 AY327588 AY327596 EF583642 EF583643 EF583644 EF583645 EF583646 EF583647 EF583648 EF583649 EF583650 EF583651 EF583652 EF583653 EF583654 EF583655 EF583656 EF670706 EF670707 EF670708 EF670709 EF670710 EF670711 EF670712 EF670713 EF670714 EF670715 EF670716 EF670717 EF670718 EF670719 EF670720 EF670721 EF670722 EF670723 FJ226028 FJ226029 FJ226030 FJ226031 FJ226032 FJ226033 FJ226034 FJ226035 FJ226036 FJ226037 FJ226038 FJ226039 FJ226040 FJ226041 FJ226042 FJ226043 FJ226044 FJ226045 FJ226046 FJ226047 FJ226049 FJ226050 FJ226051 FJ226052 FJ226053 FJ226054 FJ226055 M32738 M32739 AK301575 M31823 TSC_hg19_v1_chr1_-_155162701 J05581 NM_001018016 NM_001018017 NM_001044390 NM_001044391 NM_001044392 NM_001044393 NM_001204285 NM_001204286 NM_001204287 NM_001204288 NM_001204289 NM_001204290 NM_001204291 NM_001204292 NM_001204293 NM_001204294 NM_001204295 NM_001204296 NM_001204297 NM_002456 J05582 Z17324 Z17325	-14149	-	TSC_hg19_v1_chr1_+_155147069 AK308075 AK308637	-29756	+	TSC_hg19_v1_chr1_+_155146373 BC126372 BC143828 AK026882 AK225075 AK297318 NM_025058 BC069416 BC069568 AK096158 AY251386	-30435	+	AK223278 L38969 TSC_hg19_v1_chr1_-_155177687 AK298803 BC113846 BC113847 AK298592 AK314337 NM_001252607 NM_001252608 NM_007112	910	-	NM_002455 NM_198883 AK313863 BC001906	1720	+	AK311031 TSC_hg19_v1_chr1_-_155178970	2159	-	AF125525|MUC1|4582|mucin 1, cell surface associated##AY466157|MUC1|4582|mucin 1, cell surface associated##X80761|MUC1|4582|mucin 1, cell surface associated##S81781|MUC1|4582|mucin 1, cell surface associated##AF348143|MUC1|4582|mucin 1, cell surface associated##AY327582|MUC1|4582|mucin 1, cell surface associated##AY327583|MUC1|4582|mucin 1, cell surface associated##AY327584|MUC1|4582|mucin 1, cell surface associated##AY327585|MUC1|4582|mucin 1, cell surface associated##AY327586|MUC1|4582|mucin 1, cell surface associated##AY327589|MUC1|4582|mucin 1, cell surface associated##AY327590|MUC1|4582|mucin 1, cell surface associated##AY327591|MUC1|4582|mucin 1, cell surface associated##AY327592|MUC1|4582|mucin 1, cell surface associated##AY327595|MUC1|4582|mucin 1, cell surface associated##AY327597|MUC1|4582|mucin 1, cell surface associated##AY327598|MUC1|4582|mucin 1, cell surface associated##AY327599|MUC1|4582|mucin 1, cell surface associated##AY327600|MUC1|4582|mucin 1, cell surface associated##S81736|MUC1|4582|mucin 1, cell surface associated##U60259|MUC1|4582|mucin 1, cell surface associated##U60260|MUC1|4582|mucin 1, cell surface associated##U60261|MUC1|4582|mucin 1, cell surface associated##X52228|MUC1|4582|mucin 1, cell surface associated##X52229|MUC1|4582|mucin 1, cell surface associated##BC120974|MUC1|4582|mucin 1, cell surface associated##BC120975|MUC1|4582|mucin 1, cell surface associated##AY327587|MUC1|4582|mucin 1, cell surface associated##AY327588|MUC1|4582|mucin 1, cell surface associated##AY327596|MUC1|4582|mucin 1, cell surface associated##EF583642|MUC1|4582|mucin 1, cell surface associated##EF583643|MUC1|4582|mucin 1, cell surface associated##EF583644|MUC1|4582|mucin 1, cell surface associated##EF583645|MUC1|4582|mucin 1, cell surface associated##EF583646|MUC1|4582|mucin 1, cell surface associated##EF583647|MUC1|4582|mucin 1, cell surface associated##EF583648|MUC1|4582|mucin 1, cell surface associated##EF583649|MUC1|4582|mucin 1, cell surface associated##EF583650|MUC1|4582|mucin 1, cell surface associated##EF583651|MUC1|4582|mucin 1, cell surface associated##EF583652|MUC1|4582|mucin 1, cell surface associated##EF583653|MUC1|4582|mucin 1, cell surface associated##EF583654|MUC1|4582|mucin 1, cell surface associated##EF583655|MUC1|4582|mucin 1, cell surface associated##EF583656|MUC1|4582|mucin 1, cell surface associated##EF670706|MUC1|4582|mucin 1, cell surface associated##EF670707|MUC1|4582|mucin 1, cell surface associated##EF670708|MUC1|4582|mucin 1, cell surface associated##EF670709|MUC1|4582|mucin 1, cell surface associated##EF670710|MUC1|4582|mucin 1, cell surface associated##EF670711|MUC1|4582|mucin 1, cell surface associated##EF670712|MUC1|4582|mucin 1, cell surface associated##EF670713|MUC1|4582|mucin 1, cell surface associated##EF670714|MUC1|4582|mucin 1, cell surface associated##EF670715|MUC1|4582|mucin 1, cell surface associated##EF670716|MUC1|4582|mucin 1, cell surface associated##EF670717|MUC1|4582|mucin 1, cell surface associated##EF670718|MUC1|4582|mucin 1, cell surface associated##EF670719|MUC1|4582|mucin 1, cell surface associated##EF670720|MUC1|4582|mucin 1, cell surface associated##EF670721|MUC1|4582|mucin 1, cell surface associated##EF670722|MUC1|4582|mucin 1, cell surface associated##EF670723|MUC1|4582|mucin 1, cell surface associated##FJ226028|MUC1|4582|mucin 1, cell surface associated##FJ226029|MUC1|4582|mucin 1, cell surface associated##FJ226030|MUC1|4582|mucin 1, cell surface associated##FJ226031|MUC1|4582|mucin 1, cell surface associated##FJ226032|MUC1|4582|mucin 1, cell surface associated##FJ226033|MUC1|4582|mucin 1, cell surface associated##FJ226034|MUC1|4582|mucin 1, cell surface associated##FJ226035|MUC1|4582|mucin 1, cell surface associated##FJ226036|MUC1|4582|mucin 1, cell surface associated##FJ226037|MUC1|4582|mucin 1, cell surface associated##FJ226038|MUC1|4582|mucin 1, cell surface associated##FJ226039|MUC1|4582|mucin 1, cell surface associated##FJ226040|MUC1|4582|mucin 1, cell surface associated##FJ226041|MUC1|4582|mucin 1, cell surface associated##FJ226042|MUC1|4582|mucin 1, cell surface associated##FJ226043|MUC1|4582|mucin 1, cell surface associated##FJ226044|MUC1|4582|mucin 1, cell surface associated##FJ226045|MUC1|4582|mucin 1, cell surface associated##FJ226046|MUC1|4582|mucin 1, cell surface associated##FJ226047|MUC1|4582|mucin 1, cell surface associated##FJ226049|MUC1|4582|mucin 1, cell surface associated##FJ226050|MUC1|4582|mucin 1, cell surface associated##FJ226051|MUC1|4582|mucin 1, cell surface associated##FJ226052|MUC1|4582|mucin 1, cell surface associated##FJ226053|MUC1|4582|mucin 1, cell surface associated##FJ226054|MUC1|4582|mucin 1, cell surface associated##FJ226055|MUC1|4582|mucin 1, cell surface associated##M32738|MUC1|4582|mucin 1, cell surface associated##M32739|MUC1|4582|mucin 1, cell surface associated##AK301575|MUC1|4582|mucin 1, cell surface associated##M31823|MUC1|4582|mucin 1, cell surface associated##J05581|MUC1|4582|mucin 1, cell surface associated##NM_001018016|MUC1|4582|mucin 1, cell surface associated##NM_001018017|MUC1|4582|mucin 1, cell surface associated##NM_001044390|MUC1|4582|mucin 1, cell surface associated##NM_001044391|MUC1|4582|mucin 1, cell surface associated##NM_001044392|MUC1|4582|mucin 1, cell surface associated##NM_001044393|MUC1|4582|mucin 1, cell surface associated##NM_001204285|MUC1|4582|mucin 1, cell surface associated##NM_001204286|MUC1|4582|mucin 1, cell surface associated##NM_001204287|MUC1|4582|mucin 1, cell surface associated##NM_001204288|MUC1|4582|mucin 1, cell surface associated##NM_001204289|MUC1|4582|mucin 1, cell surface associated##NM_001204290|MUC1|4582|mucin 1, cell surface associated##NM_001204291|MUC1|4582|mucin 1, cell surface associated##NM_001204292|MUC1|4582|mucin 1, cell surface associated##NM_001204293|MUC1|4582|mucin 1, cell surface associated##NM_001204294|MUC1|4582|mucin 1, cell surface associated##NM_001204295|MUC1|4582|mucin 1, cell surface associated##NM_001204296|MUC1|4582|mucin 1, cell surface associated##NM_001204297|MUC1|4582|mucin 1, cell surface associated##NM_002456|MUC1|4582|mucin 1, cell surface associated##J05582|MUC1|4582|mucin 1, cell surface associated##Z17324|MUC1|4582|mucin 1, cell surface associated##Z17325|MUC1|4582|mucin 1, cell surface associated##AK308075|TRIM46|80128|tripartite motif containing 46##BC126372|TRIM46|80128|tripartite motif containing 46##BC143828|TRIM46|80128|tripartite motif containing 46##AK026882|TRIM46|80128|tripartite motif containing 46##AK225075|TRIM46|80128|tripartite motif containing 46##AK297318|TRIM46|80128|tripartite motif containing 46##NM_025058|TRIM46|80128|tripartite motif containing 46##BC069416|TRIM46|80128|tripartite motif containing 46##BC069568|TRIM46|80128|tripartite motif containing 46##AK096158|TRIM46|80128|tripartite motif containing 46##AY251386|TRIM46|80128|tripartite motif containing 46##AK223278|THBS3|7059|thrombospondin 3##L38969|THBS3|7059|thrombospondin 3##AK298803|THBS3|7059|thrombospondin 3##BC113846|THBS3|7059|thrombospondin 3##BC113847|THBS3|7059|thrombospondin 3##AK298592|THBS3|7059|thrombospondin 3##AK314337|THBS3|7059|thrombospondin 3##NM_001252607|THBS3|7059|thrombospondin 3##NM_001252608|THBS3|7059|thrombospondin 3##NM_007112|THBS3|7059|thrombospondin 3##NM_002455|MTX1|4580|metaxin 1##NM_198883|MTX1|4580|metaxin 1##AK313863|MTX1|4580|metaxin 1##BC001906|MTX1|4580|metaxin 1##AK311031|THBS3|7059|thrombospondin 3	1.798575	CTCF.p2:-9:0.994	CTCF.p2:37:0.805
chr12	118814005	118814158	reg1000501.p1	18.461	+	TSC_hg19_v1_chr12_-_118810713 NM_016281	-3351	-	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	-3453	-	TSC_hg19_v1_chr12_+_118573963 AB528565 X85033	-240103	+	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	321	+	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	605266	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	802598	+	NM_016281|TAOK3|51347|TAO kinase 3##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##X85033|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8	0.073831	
chr11	2909721	2909842	reg1000588.p1	18.456	+	U22398 BC039188 NM_000076 NM_001122630 NM_001122631 TSC_hg19_v1_chr11_-_2907004 BC067842	-2787	-	AK123073 TSC_hg19_v1_chr11_-_2721223	-188556	-	BC007733 TSC_hg19_v1_chr11_-_2560881	-348934	-	TSC_hg19_v1_chr11_+_2920918 BC015571 NM_183233	11164	+	TSC_hg19_v1_chr11_+_2923507 NM_002555	13721	+	TSC_hg19_v1_chr11_+_2923528 AB012083 AF028738 AF059663 AF070479 AF037064	13755	+	U22398|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC039188|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_000076|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122630|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122631|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC067842|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##AK123073|KCNQ1OT1|10984|KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)##BC015571|SLC22A18|5002|solute carrier family 22, member 18##NM_183233|SLC22A18|5002|solute carrier family 22, member 18##NM_002555|SLC22A18|5002|solute carrier family 22, member 18##AB012083|SLC22A18|5002|solute carrier family 22, member 18##AF028738|SLC22A18|5002|solute carrier family 22, member 18##AF059663|SLC22A18|5002|solute carrier family 22, member 18##AF070479|SLC22A18|5002|solute carrier family 22, member 18##AF037064|SLC22A18|5002|solute carrier family 22, member 18	1.045021	CTCF.p2:6:0.999
chr17	46956420	46956540	reg1000412.p3	18.451	+	NM_005831 AK293329 TSC_hg19_v1_chr17_+_46908406 AK293137 AK303313 AK304024 AK310648 AK314796 U22897 AK222666 AK223227 AK298177 BC004130	-48090	+	AK097392 AK302952 BC041368 AL834151 NM_001130918	-62056	-	CU689652 BC033563 NM_173623 AK310321	-84835	-	AK095669 TSC_hg19_v1_chr17_+_46970178 NM_001002027 NM_005175 AL080089 AK311848 D13118	13705	+	TSC_hg19_v1_chr17_+_46985768 NM_023079 AK296865	29265	+	AK130303 TSC_hg19_v1_chr17_+_46985840 AK024030 AK122770	29354	+	NM_005831|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293329|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293137|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK303313|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK304024|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK314796|CALCOCO2|10241|calcium binding and coiled-coil domain 2##U22897|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK222666|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK223227|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK298177|CALCOCO2|10241|calcium binding and coiled-coil domain 2##BC004130|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK097392|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK302952|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC041368|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AL834151|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_001130918|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC033563|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_173623|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK310321|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK095669|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_001002027|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_005175|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AL080089|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AK311848|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##D13118|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_023079|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK296865|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK130303|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK024030|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK122770|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z	0.729718	CTCF.p2:18:0.730
chr6	15691605	15691757	reg1000327.p1	18.448	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-28391	-	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	-28504	-	TSC_hg19_v1_chr6_+_15249113 AK303610	-442568	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	437621	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	437756	+	TSC_hg19_v1_chr6_+_16143281 AK026739	451629	+	NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein	1.336846	CTCF.p2:33:0.340	CTCF.p2:-44:0.997
chr13	100089257	100089389	reg1000265.p2	18.434	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-129625	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-178709	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-236204	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	64377	+	TSC_hg19_v1_chr13_+_100153777 BC130293	64459	+	BC041830 TSC_hg19_v1_chr13_+_100229390	140054	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.816182	CTCF.p2:13:0.489	CTCF.p2:-43:0.327
chr2	219712520	219712633	reg1000309.p1	18.432	+	AJ249977 BC098102 BC098255 BC098277 BC098306 NM_017431 AK300078 AK300687 AK309865	-16058	-	X59812 TSC_hg19_v1_chr2_+_219646869 AK290418 M62401 BC040430 BC051851 AK310782 CU690866 AY178622	-65685	+	TSC_hg19_v1_chr2_+_219646471 AK226039 NM_000784 BC017044	-66102	+	AY009401 NM_006522 AK075522 AB059570 DQ890770 BC004329 AB590154 BT007456	12076	+	BC052234 AK024363 NM_025216 BC040026	32687	+	TSC_hg19_v1_chr2_+_219824381 BC041771 NM_003936 U34051	111833	+	AJ249977|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098102|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098255|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098277|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098306|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##NM_017431|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300078|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300687|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK309865|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AY009401|WNT6|7475|wingless-type MMTV integration site family, member 6##NM_006522|WNT6|7475|wingless-type MMTV integration site family, member 6##AK075522|WNT6|7475|wingless-type MMTV integration site family, member 6##AB059570|WNT6|7475|wingless-type MMTV integration site family, member 6##DQ890770|WNT6|7475|wingless-type MMTV integration site family, member 6##BC004329|WNT6|7475|wingless-type MMTV integration site family, member 6##BT007456|WNT6|7475|wingless-type MMTV integration site family, member 6##BC052234|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AK024363|WNT10A|80326|wingless-type MMTV integration site family, member 10A##NM_025216|WNT10A|80326|wingless-type MMTV integration site family, member 10A##BC040026|WNT10A|80326|wingless-type MMTV integration site family, member 10A##BC041771|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##NM_003936|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##U34051|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)	1.857815	CTCF.p2:-21:0.859	CTCF.p2:32:0.999
chr8	37557921	37558047	reg1000580.p1	18.425	+	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	-4667	+	TSC_hg19_v1_chr8_-_37457377 AK025743	-100616	-	NM_001031836 AK302391 BC028701	-916114	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	36122	+	TSC_hg19_v1_chr8_+_37594151 BC050611 AK291394 AK297279 AY358108	36160	+	TSC_hg19_v1_chr8_+_37594155 AY358851	36177	+	AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##AK025743|LOC157860|157860|uncharacterized LOC157860##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2##BC050611|ERLIN2|11160|ER lipid raft associated 2##AK291394|ERLIN2|11160|ER lipid raft associated 2##AK297279|ERLIN2|11160|ER lipid raft associated 2##AY358108|ERLIN2|11160|ER lipid raft associated 2##AY358851|ERLIN2|11160|ER lipid raft associated 2	0.998664	CTCF.p2:0:0.999
chr3	39231413	39231550	reg1000556.p1	18.419	+	NM_033027 TSC_hg19_v1_chr3_-_39195146	-36357	-	TSC_hg19_v1_chr3_-_39195053 BC038949 AB053121 BC028213	-36430	-	NM_001105513 NM_145755 AJ487015 BC062621 BC129948 AK022483 BC039691 AK302408 AK302465 CU687576	-82242	+	BC127119 BC139782 AY375160 NM_194293 TSC_hg19_v1_chr3_-_39234085 AJ626899 AJ626900 NM_001198621 AK096421 BX648565 CR749430	2604	-	U28934 BC028078 U20350 AK307911 AK312373 AK225764 BC017855 NM_001337	90021	-	NM_001171172	90448	-	NM_033027|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC038949|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##AB053121|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC028213|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##NM_001105513|TTC21A|199223|tetratricopeptide repeat domain 21A##NM_145755|TTC21A|199223|tetratricopeptide repeat domain 21A##AJ487015|TTC21A|199223|tetratricopeptide repeat domain 21A##BC062621|TTC21A|199223|tetratricopeptide repeat domain 21A##BC129948|TTC21A|199223|tetratricopeptide repeat domain 21A##AK022483|TTC21A|199223|tetratricopeptide repeat domain 21A##BC039691|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302408|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302465|TTC21A|199223|tetratricopeptide repeat domain 21A##BC127119|XIRP1|165904|xin actin-binding repeat containing 1##BC139782|XIRP1|165904|xin actin-binding repeat containing 1##AY375160|XIRP1|165904|xin actin-binding repeat containing 1##NM_194293|XIRP1|165904|xin actin-binding repeat containing 1##AJ626899|XIRP1|165904|xin actin-binding repeat containing 1##AJ626900|XIRP1|165904|xin actin-binding repeat containing 1##NM_001198621|XIRP1|165904|xin actin-binding repeat containing 1##AK096421|XIRP1|165904|xin actin-binding repeat containing 1##BX648565|XIRP1|165904|xin actin-binding repeat containing 1##CR749430|XIRP1|165904|xin actin-binding repeat containing 1##U28934|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC028078|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##U20350|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK307911|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK312373|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK225764|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC017855|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001337|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171172|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1	0.9321	CTCF.p2:-9:0.932
chr17	56524975	56525095	reg1000254.p2	18.418	+	NM_017763 TSC_hg19_v1_chr17_-_56494959 CR627423	-30091	-	TSC_hg19_v1_chr17_-_56494896 CR749257	-30142	-	AB527734 TSC_hg19_v1_chr17_-_56492959 AK296769 AK000322 BC109028	-31999	-	BC115385 BC115386 BC033017 BC033020 NM_001080439 TSC_hg19_v1_chr17_-_56565791	40714	-	TSC_hg19_v1_chr17_-_56591953 AK308877	66907	-	AF264717 TSC_hg19_v1_chr17_-_56595226 BC035609 NM_004687	70208	-	NM_017763|RNF43|54894|ring finger protein 43##CR627423|RNF43|54894|ring finger protein 43##CR749257|RNF43|54894|ring finger protein 43##AK296769|RNF43|54894|ring finger protein 43##AK000322|RNF43|54894|ring finger protein 43##BC109028|RNF43|54894|ring finger protein 43##BC115385|HSF5|124535|heat shock transcription factor family member 5##BC115386|HSF5|124535|heat shock transcription factor family member 5##BC033017|HSF5|124535|heat shock transcription factor family member 5##BC033020|HSF5|124535|heat shock transcription factor family member 5##NM_001080439|HSF5|124535|heat shock transcription factor family member 5##AK308877|MTMR4|9110|myotubularin related protein 4##AF264717|MTMR4|9110|myotubularin related protein 4##BC035609|MTMR4|9110|myotubularin related protein 4##NM_004687|MTMR4|9110|myotubularin related protein 4	0.741823	CTCF.p2:11:0.742
chr2	96840379	96840497	reg1000292.p2	18.410	+	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	-29279	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	-29484	-	BC107126 AJ537600 BC107127 NM_001002036	-36265	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	33617	-	TSC_hg19_v1_chr2_+_96874144 AK311432	33716	+	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	34096	-	BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.816904	CTCF.p2:12:0.817
chr10	73808399	73808546	reg1000282.p1	18.407	+	TSC_hg19_v1_chr10_+_73723993 AB017915 NM_004273 AB012192	-84415	+	TSC_hg19_v1_chr10_-_73611059 NM_001042465 NM_001042466 NM_002778	-197381	-	AK299184 TSC_hg19_v1_chr10_-_73611043	-197429	-	AK292328 TSC_hg19_v1_chr10_-_73848270 AK294008 AK307091	39796	-	TSC_hg19_v1_chr10_-_73848286 AY358921	39810	-	TSC_hg19_v1_chr10_-_73848310 AJ001453	39868	-	AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_001042465|PSAP|5660|prosaposin##NM_001042466|PSAP|5660|prosaposin##NM_002778|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin##AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AY358921|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AJ001453|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	1.868737	CTCF.p2:-18:0.972	CTCF.p2:59:0.897
chr19	38724558	38724678	reg1000510.p1	18.402	+	TSC_hg19_v1_chr19_-_38720336 AK297581	-4284	-	BC021191 TSC_hg19_v1_chr19_-_38720320 NM_001135156	-4302	-	AB463560 GQ358728 BC125152 BC125153 U43843 AK308563 NM_001135155 NM_004647	-9783	-	CU676810 DQ892130 DQ895324 BC021089 TSC_hg19_v1_chr19_-_38747015 AF123763 AY050670	22378	-	AB056508 AB056509 NM_001243947 NM_033256	22582	-	NM_001166103 NM_021102 BC001668 TSC_hg19_v1_chr19_+_38755212 AX772830 AB006534 BC012868	30542	+	AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1##BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1##GQ358728|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125152|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125153|DPF1|8193|D4, zinc and double PHD fingers family 1##U43843|DPF1|8193|D4, zinc and double PHD fingers family 1##AK308563|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135155|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_004647|DPF1|8193|D4, zinc and double PHD fingers family 1##DQ892130|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##DQ895324|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##BC021089|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##AF123763|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##AY050670|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##AB056508|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##AB056509|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##NM_001243947|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##NM_033256|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##NM_001166103|SPINT2|10653|serine peptidase inhibitor, Kunitz type, 2##NM_021102|SPINT2|10653|serine peptidase inhibitor, Kunitz type, 2##BC001668|SPINT2|10653|serine peptidase inhibitor, Kunitz type, 2##AX772830|SPINT2|10653|serine peptidase inhibitor, Kunitz type, 2##AB006534|SPINT2|10653|serine peptidase inhibitor, Kunitz type, 2##BC012868|SPINT2|10653|serine peptidase inhibitor, Kunitz type, 2	1.104893	CTCF.p2:0:1.000
chr2	27184716	27184825	reg1000377.p1	18.401	+	AF264015 NM_020134 TSC_hg19_v1_chr2_+_27070999 BC002874 NM_001253723 NM_001253724	-113644	+	TSC_hg19_v1_chr2_+_27008924 U14518 BC000881 BC002703 CU674442 BT007246	-175782	+	NM_001809 NM_001042426 TSC_hg19_v1_chr2_+_27008894	-175878	+	TSC_hg19_v1_chr2_+_27193529 AK312342 AB025186 NM_012326 BC011557 Y11174	8780	+	TSC_hg19_v1_chr2_+_27255814 NM_001083590 NM_017727 BC068479	71013	+	TSC_hg19_v1_chr2_+_27255832 AK297150	71059	+	AF264015|DPYSL5|56896|dihydropyrimidinase-like 5##NM_020134|DPYSL5|56896|dihydropyrimidinase-like 5##BC002874|DPYSL5|56896|dihydropyrimidinase-like 5##NM_001253723|DPYSL5|56896|dihydropyrimidinase-like 5##NM_001253724|DPYSL5|56896|dihydropyrimidinase-like 5##U14518|CENPA|1058|centromere protein A##BC000881|CENPA|1058|centromere protein A##BC002703|CENPA|1058|centromere protein A##BT007246|CENPA|1058|centromere protein A##NM_001809|CENPA|1058|centromere protein A##NM_001042426|CENPA|1058|centromere protein A##AK312342|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##AB025186|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##NM_012326|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##BC011557|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##Y11174|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##NM_001083590|TMEM214|54867|transmembrane protein 214##NM_017727|TMEM214|54867|transmembrane protein 214##BC068479|TMEM214|54867|transmembrane protein 214##AK297150|TMEM214|54867|transmembrane protein 214	0.94033	CTCF.p2:-6:0.940
chr6	44140567	44140683	reg1000540.p1	18.399	+	NM_007058 AK314054 BC033733	-14064	+	TSC_hg19_v1_chr6_+_44095393 AK093629 AX748232 NM_018426 AK309791	-45219	+	TSC_hg19_v1_chr6_-_44095190 NM_032111	-45427	-	NM_001078174 NM_004955 TSC_hg19_v1_chr6_+_44187322 BC095398 AK090491 AK304285 AX746476 AB490708 AX775997 U81375 AF079117	46731	+	TSC_hg19_v1_chr6_+_44191331 NM_001078175 NM_001078176 BC001382 AK293558 BC008954 NM_001078177	50718	+	TSC_hg19_v1_chr6_+_44191517 AK090615 AB490709	50953	+	NM_007058|CAPN11|11131|calpain 11##AK314054|CAPN11|11131|calpain 11##BC033733|CAPN11|11131|calpain 11##AK093629|TMEM63B|55362|transmembrane protein 63B##NM_018426|TMEM63B|55362|transmembrane protein 63B##AK309791|TMEM63B|55362|transmembrane protein 63B##NM_032111|MRPL14|64928|mitochondrial ribosomal protein L14##NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AX775997|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078175|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078176|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC001382|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK293558|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC008954|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078177|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK090615|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AB490709|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	0.856811	CTCF.p2:-3:0.857
chr2	42313688	42313823	reg1000343.p1	18.394	+	AB528999 TSC_hg19_v1_chr2_+_42275979	-37794	+	TSC_hg19_v1_chr2_+_42275160 NM_138370	-38623	+	AK124893 NM_001242815	-132813	-	TSC_hg19_v1_chr2_+_42396514 AB275889 NM_001145076 NM_019063 AK314702 BC146799 AF177377 BC067777 BC104647 BC140845 AB374363 AB462412 AB384933	82820	+	AF127788 BT007371 CR542208 CU675543 DQ890566 DQ893729 TSC_hg19_v1_chr2_-_42588354 AB007618 BC005251 BC007095 NM_004718	274578	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	406803	-	NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_001145076|EML4|27436|echinoderm microtubule associated protein like 4##NM_019063|EML4|27436|echinoderm microtubule associated protein like 4##AK314702|EML4|27436|echinoderm microtubule associated protein like 4##BC146799|EML4|27436|echinoderm microtubule associated protein like 4##AF177377|EML4|27436|echinoderm microtubule associated protein like 4##BC067777|EML4|27436|echinoderm microtubule associated protein like 4##BC104647|EML4|27436|echinoderm microtubule associated protein like 4##BC140845|EML4|27436|echinoderm microtubule associated protein like 4##AF127788|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BT007371|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##CR542208|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ890566|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ893729|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB007618|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC005251|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC007095|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##NM_004718|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3	0.902242	CTCF.p2:27:0.902
chr16	115790	115915	reg1000584.p1	18.376	+	TSC_hg19_v1_chr16_+_103908 Z84714 DQ892129 DQ892337 DQ895322	-11913	+	AK026593 TSC_hg19_v1_chr16_+_103859 BC009179	-11984	+	TSC_hg19_v1_chr16_+_103838 NM_024571	-12014	+	TSC_hg19_v1_chr16_-_122628 BC014425 AK026010 AK056708 AK225408 AK304812 AK291177 NM_022450	6749	-	NM_001015054	11165	+	NM_001015052 NM_002434 TSC_hg19_v1_chr16_+_128206	12335	+	Z84714|SNRNP25|79622|small nuclear ribonucleoprotein 25kDa (U11/U12)##DQ892129|SNRNP25|79622|small nuclear ribonucleoprotein 25kDa (U11/U12)##DQ892337|SNRNP25|79622|small nuclear ribonucleoprotein 25kDa (U11/U12)##DQ895322|SNRNP25|79622|small nuclear ribonucleoprotein 25kDa (U11/U12)##AK026593|SNRNP25|79622|small nuclear ribonucleoprotein 25kDa (U11/U12)##BC009179|SNRNP25|79622|small nuclear ribonucleoprotein 25kDa (U11/U12)##NM_024571|SNRNP25|79622|small nuclear ribonucleoprotein 25kDa (U11/U12)##BC014425|RHBDF1|64285|rhomboid 5 homolog 1 (Drosophila)##AK026010|RHBDF1|64285|rhomboid 5 homolog 1 (Drosophila)##AK056708|RHBDF1|64285|rhomboid 5 homolog 1 (Drosophila)##AK225408|RHBDF1|64285|rhomboid 5 homolog 1 (Drosophila)##AK304812|RHBDF1|64285|rhomboid 5 homolog 1 (Drosophila)##AK291177|RHBDF1|64285|rhomboid 5 homolog 1 (Drosophila)##NM_022450|RHBDF1|64285|rhomboid 5 homolog 1 (Drosophila)##NM_001015054|MPG|4350|N-methylpurine-DNA glycosylase##NM_001015052|MPG|4350|N-methylpurine-DNA glycosylase##NM_002434|MPG|4350|N-methylpurine-DNA glycosylase	0.963597	CTCF.p2:-4:0.964
chr1	154851076	154851209	reg1000571.p1	18.371	+	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	-8396	-	BX649146 TSC_hg19_v1_chr1_-_154840541	-10641	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	-18880	-	BT019976 CR541998 TSC_hg19_v1_chr1_-_154909187 L77213	58032	-	TSC_hg19_v1_chr1_-_154909401 BC007694 BC000237 AK130234 AK312803 BC006089 NM_006556	58291	-	TSC_hg19_v1_chr1_-_154928571 BC016852 NM_020524 AF221521 AK023219 AK303413 AK303863 AK300987	77437	-	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BT019976|PMVK|10654|phosphomevalonate kinase##CR541998|PMVK|10654|phosphomevalonate kinase##L77213|PMVK|10654|phosphomevalonate kinase##BC007694|PMVK|10654|phosphomevalonate kinase##AK130234|PMVK|10654|phosphomevalonate kinase##AK312803|PMVK|10654|phosphomevalonate kinase##BC006089|PMVK|10654|phosphomevalonate kinase##NM_006556|PMVK|10654|phosphomevalonate kinase##BC016852|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##NM_020524|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AF221521|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK023219|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303413|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303863|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK300987|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1	0.91979	CTCF.p2:6:0.920
chr14	71088977	71089095	reg1000299.p2	18.368	+	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	-21659	-	AB463868 BT006831 CR541697 TSC_hg19_v1_chr14_-_71067367	-21676	-	BC025378 NM_003814	-87305	-	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	19573	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	186773	-	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	285097	+	AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##BT006831|MED6|10001|mediator complex subunit 6##CR541697|MED6|10001|mediator complex subunit 6##BC025378|ADAM20|8748|ADAM metallopeptidase domain 20##NM_003814|ADAM20|8748|ADAM metallopeptidase domain 20##D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)	0.0	
chr11	68025007	68025127	reg1000262.p1	18.365	+	TSC_hg19_v1_chr11_-_67981112 AF264782 BC002522 BC065287 BC087834 NM_016028 NM_017635 BC108304 AK314336 AK299201	-44088	-	NM_001277 NM_212469 TSC_hg19_v1_chr11_-_67888859	-136179	-	D10704 BC036471 TSC_hg19_v1_chr11_-_67888844	-136310	-	TSC_hg19_v1_chr11_-_68039418 AF264781	14319	-	TSC_hg19_v1_chr11_-_68039453 NM_022338	14391	-	TSC_hg19_v1_chr11_+_68080058 AB017498 NM_002335 AF077820 AF064548 BC150595 BC098397	55022	+	AF264782|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC002522|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC065287|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC087834|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_016028|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_017635|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC108304|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK314336|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK299201|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_001277|CHKA|1119|choline kinase alpha##NM_212469|CHKA|1119|choline kinase alpha##D10704|CHKA|1119|choline kinase alpha##BC036471|CHKA|1119|choline kinase alpha##AF264781|C11orf24|53838|chromosome 11 open reading frame 24##NM_022338|C11orf24|53838|chromosome 11 open reading frame 24##AB017498|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_002335|LRP5|4041|low density lipoprotein receptor-related protein 5##AF077820|LRP5|4041|low density lipoprotein receptor-related protein 5##AF064548|LRP5|4041|low density lipoprotein receptor-related protein 5##BC150595|LRP5|4041|low density lipoprotein receptor-related protein 5##BC098397|LRP5|4041|low density lipoprotein receptor-related protein 5	0.902432	CTCF.p2:-31:0.902
chr6	161791943	161792081	reg1000529.p1	18.365	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	-96952	-	AK094629 TSC_hg19_v1_chr6_-_161413451	-378599	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-379154	+	AK057286 NM_001080378 NM_152410 BC044227	1356157	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	1356715	-	TSC_hg19_v1_chr6_-_163148797 AB245403 AK292590 BC022014	1356766	-	AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB245403|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AK292590|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##BC022014|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.702222	CTCF.p2:22:0.702
chr11	131737706	131737835	reg1000467.p1	18.363	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-497301	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-951382	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-951425	-	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	42854	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	43569	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	1075244	-	NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.981863	CTCF.p2:-16:0.982
chr11	1051197	1051320	reg1000388.p1	18.353	+	AY458429 AY312160 NM_005961 TSC_hg19_v1_chr11_-_1036715	-14572	-	TSC_hg19_v1_chr11_-_1017140 AK096772	-34051	-	U97698 AK092533 TSC_hg19_v1_chr11_-_1016879 AK098503	-34392	-	TSC_hg19_v1_chr11_+_1074873 L21998 NM_002457	23614	+	TSC_hg19_v1_chr11_+_1151579 AF015521 AJ298317 AF043909	100328	+	TSC_hg19_v1_chr11_+_1213469 Z48314	162216	+	AY458429|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AY312160|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##NM_005961|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AK096772|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##U97698|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AK092533|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AK098503|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##L21998|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##NM_002457|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##AF015521|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AJ298317|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AF043909|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##Z48314|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming	0.993213	CTCF.p2:11:0.993
chr1	521500	521612	reg1000315.p1	18.351	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-153908	+	NM_001005484	-452466	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-492151	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	100486	-	TSC_hg19_v1_chr1_-_714015 BC006361	192461	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	241339	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	0.0	
chr2	175327633	175327759	reg1000576.p1	18.351	+	BC119684 BC119685 BC119685 TSC_hg19_v1_chr2_+_175260519	-67138	+	TSC_hg19_v1_chr2_+_175260466 NM_001193528 NM_024583 AK296558 AK295357 AK295357 AK057912 AK057912 BC007344	-67219	+	AB528012 AF098297 CU677191 TSC_hg19_v1_chr2_-_175260427 BC031018 U03644 BC046098 BC015040 BC021175 BC038987 AK292389 NM_004882	-67294	-	BC036681 AK091200 AK315125 AX746845 BC028730 AL834154 TSC_hg19_v1_chr2_-_175351812 AK307896 BX537947 NM_001033045 NM_152529 BC035037	24101	-	TSC_hg19_v1_chr2_-_175462533 BC002914 X86019	134785	-	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	171601	-	BC119684|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##NM_001193528|SCRN3|79634|secernin 3##NM_024583|SCRN3|79634|secernin 3##AK296558|SCRN3|79634|secernin 3##AK295357|SCRN3|79634|secernin 3##AK295357|SCRN3|79634|secernin 3##AK057912|SCRN3|79634|secernin 3##AK057912|SCRN3|79634|secernin 3##AF098297|CIR1|9541|corepressor interacting with RBPJ, 1##BC031018|CIR1|9541|corepressor interacting with RBPJ, 1##U03644|CIR1|9541|corepressor interacting with RBPJ, 1##BC046098|CIR1|9541|corepressor interacting with RBPJ, 1##BC015040|CIR1|9541|corepressor interacting with RBPJ, 1##BC021175|CIR1|9541|corepressor interacting with RBPJ, 1##BC038987|CIR1|9541|corepressor interacting with RBPJ, 1##AK292389|CIR1|9541|corepressor interacting with RBPJ, 1##NM_004882|CIR1|9541|corepressor interacting with RBPJ, 1##BC036681|GPR155|151556|G protein-coupled receptor 155##AK091200|GPR155|151556|G protein-coupled receptor 155##AK315125|GPR155|151556|G protein-coupled receptor 155##BC028730|GPR155|151556|G protein-coupled receptor 155##AL834154|GPR155|151556|G protein-coupled receptor 155##AK307896|GPR155|151556|G protein-coupled receptor 155##BX537947|GPR155|151556|G protein-coupled receptor 155##NM_001033045|GPR155|151556|G protein-coupled receptor 155##NM_152529|GPR155|151556|G protein-coupled receptor 155##BC035037|GPR155|151556|G protein-coupled receptor 155##BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1##X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1##AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1	0.9983	CTCF.p2:-7:0.998
chr11	2554121	2554259	reg1000269.p1	18.348	+	TSC_hg19_v1_chr11_+_2466237 AF000571 NM_000218 EF010934 AB464057 AY114213 U86146	-87941	+	AJ270996 BC093787 BC093789 BC143351 BC143353 AF177473 NM_014555	-109933	-	AF125568 NM_005706	-130668	+	BC007733 TSC_hg19_v1_chr11_-_2560881	6657	-	AK123073 TSC_hg19_v1_chr11_-_2721223	167035	-	U22398 BC039188 NM_000076 NM_001122630 NM_001122631 TSC_hg19_v1_chr11_-_2907004 BC067842	352804	-	AF000571|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##NM_000218|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##EF010934|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AY114213|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##U86146|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AJ270996|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093787|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093789|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143351|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143353|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF177473|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##NM_014555|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF125568|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_005706|TSSC4|10078|tumor suppressing subtransferable candidate 4##AK123073|KCNQ1OT1|10984|KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)##U22398|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC039188|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_000076|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122630|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122631|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC067842|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)	0.944363	CTCF.p2:0:0.944
chr22	46518430	46518563	reg1000638.p1	18.348	+	AB528792 AK001807 NM_018280 TSC_hg19_v1_chr22_-_46450052	-68484	-	TSC_hg19_v1_chr22_+_46449736 BC036832	-68772	+	AF416743 NM_058238 TSC_hg19_v1_chr22_-_46373045	-145467	-	NM_001001928 NM_005036 AY258330 TSC_hg19_v1_chr22_+_46546555 AY258328	28034	+	TSC_hg19_v1_chr22_+_46546708 AK289821	28214	+	TSC_hg19_v1_chr22_-_46646191 BC036462 BC067871 NM_207327 BX648331	127712	-	AK001807|C22orf26|55267|chromosome 22 open reading frame 26##NM_018280|C22orf26|55267|chromosome 22 open reading frame 26##AF416743|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_058238|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_001001928|PPARA|5465|peroxisome proliferator-activated receptor alpha##NM_005036|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258330|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258328|PPARA|5465|peroxisome proliferator-activated receptor alpha##AK289821|PPARA|5465|peroxisome proliferator-activated receptor alpha##BC036462|C22orf40|150383|chromosome 22 open reading frame 40##BC067871|C22orf40|150383|chromosome 22 open reading frame 40##NM_207327|C22orf40|150383|chromosome 22 open reading frame 40##BX648331|C22orf40|150383|chromosome 22 open reading frame 40	0.998351	CTCF.p2:-5:0.998
chr3	195577856	195577988	reg1000459.p1	18.346	+	EF091824 AJ242549 AJ242550 AJ276359 AJ277412 AJ277505 AJ400633 AJ400849 AJ400850 AJ400851 AJ400852 AJ400853 AJ400854 AJ400855 AJ400856 AJ400857 AJ400858 TSC_hg19_v1_chr3_-_195538801 AK307054 NM_004532 NM_018406 NM_138297	-39151	-	NM_001098516	-126825	+	TSC_hg19_v1_chr3_+_195447848 AY358449 AK075138 BC029267 AK027314 BC044243 CU688620 CU692194	-130078	+	BC008884 AK225786 BC020389 TSC_hg19_v1_chr3_-_195619679	41643	-	AK131539 NM_001010938	44509	-	NM_005781 L13738	57994	-	EF091824|MUC4|4585|mucin 4, cell surface associated##AJ242549|MUC4|4585|mucin 4, cell surface associated##AJ242550|MUC4|4585|mucin 4, cell surface associated##AJ276359|MUC4|4585|mucin 4, cell surface associated##AJ277412|MUC4|4585|mucin 4, cell surface associated##AJ277505|MUC4|4585|mucin 4, cell surface associated##AJ400633|MUC4|4585|mucin 4, cell surface associated##AJ400849|MUC4|4585|mucin 4, cell surface associated##AJ400850|MUC4|4585|mucin 4, cell surface associated##AJ400851|MUC4|4585|mucin 4, cell surface associated##AJ400852|MUC4|4585|mucin 4, cell surface associated##AJ400853|MUC4|4585|mucin 4, cell surface associated##AJ400854|MUC4|4585|mucin 4, cell surface associated##AJ400855|MUC4|4585|mucin 4, cell surface associated##AJ400856|MUC4|4585|mucin 4, cell surface associated##AJ400857|MUC4|4585|mucin 4, cell surface associated##AJ400858|MUC4|4585|mucin 4, cell surface associated##AK307054|MUC4|4585|mucin 4, cell surface associated##NM_004532|MUC4|4585|mucin 4, cell surface associated##NM_018406|MUC4|4585|mucin 4, cell surface associated##NM_138297|MUC4|4585|mucin 4, cell surface associated##NM_001098516|MUC20|200958|mucin 20, cell surface associated##AY358449|MUC20|200958|mucin 20, cell surface associated##AK075138|MUC20|200958|mucin 20, cell surface associated##BC029267|MUC20|200958|mucin 20, cell surface associated##AK027314|MUC20|200958|mucin 20, cell surface associated##BC044243|MUC20|200958|mucin 20, cell surface associated##BC008884|TNK2|10188|tyrosine kinase, non-receptor, 2##AK225786|TNK2|10188|tyrosine kinase, non-receptor, 2##BC020389|TNK2|10188|tyrosine kinase, non-receptor, 2##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_005781|TNK2|10188|tyrosine kinase, non-receptor, 2##L13738|TNK2|10188|tyrosine kinase, non-receptor, 2	1.218915	CTCF.p2:-24:0.810	CTCF.p2:30:0.322
chr12	54399859	54399983	reg1000253.p1	18.340	+	NM_006897 BC053894 AK315194 AK000445 AB464582 CU691056 BC032769	-5996	+	AK313759 NM_017409 BC001293 AB464578 AF255675 BT009921	-20935	+	NM_014212 AK291946 BC001543 AJ000041 CU674756	-32954	+	TSC_hg19_v1_chr12_+_54402796 BC053898 NM_022658 AK290959	2925	+	NM_014620 NM_153693 TSC_hg19_v1_chr12_+_54410671 X07495	10756	+	BC034922 BC044635 M16938 TSC_hg19_v1_chr12_+_54410917 AK314829	11003	+	NM_006897|HOXC9|3225|homeobox C9##BC053894|HOXC9|3225|homeobox C9##AK315194|HOXC9|3225|homeobox C9##AK000445|HOXC9|3225|homeobox C9##BC032769|HOXC9|3225|homeobox C9##AK313759|HOXC10|3226|homeobox C10##NM_017409|HOXC10|3226|homeobox C10##BC001293|HOXC10|3226|homeobox C10##AF255675|HOXC10|3226|homeobox C10##BT009921|HOXC10|3226|homeobox C10##NM_014212|HOXC11|3227|homeobox C11##AK291946|HOXC11|3227|homeobox C11##BC001543|HOXC11|3227|homeobox C11##AJ000041|HOXC11|3227|homeobox C11##BC053898|HOXC8|3224|homeobox C8##NM_022658|HOXC8|3224|homeobox C8##AK290959|HOXC8|3224|homeobox C8##NM_014620|HOXC4|3221|homeobox C4##NM_153693|HOXC6|3223|homeobox C6##X07495|HOXC4|3221|homeobox C4##BC034922|HOXC5|3222|homeobox C5##BC044635|HOXC5|3222|homeobox C5##M16938|HOXC6|3223|homeobox C6##AK314829|HOXC6|3223|homeobox C6	0.64769	CTCF.p2:-9:0.648
chr17	2319435	2319571	reg1000423.p1	18.339	+	X96401 NM_020310 TSC_hg19_v1_chr17_-_2304355 AK291596	-15187	-	TSC_hg19_v1_chr17_+_2240796 NM_014853 AB007857 NM_001098509 BC039204 AK294955 AB275762 AB385325 AB449878 AK304263	-78601	+	NM_018128 AB037822	-78765	-	TSC_hg19_v1_chr17_-_2415189 BX647255 AK294547 BC050603 BC001213 AL832612 AK027410 AK296464 NM_024086	95642	-	TSC_hg19_v1_chr17_+_2496944 NM_000430 L13386	177467	+	TSC_hg19_v1_chr17_+_2497263 BX538346 AK313078 L13385 BC064638	177755	+	X96401|MNT|4335|MAX binding protein##NM_020310|MNT|4335|MAX binding protein##AK291596|MNT|4335|MAX binding protein##NM_014853|SGSM2|9905|small G protein signaling modulator 2##AB007857|SGSM2|9905|small G protein signaling modulator 2##NM_001098509|SGSM2|9905|small G protein signaling modulator 2##BC039204|SGSM2|9905|small G protein signaling modulator 2##AK294955|SGSM2|9905|small G protein signaling modulator 2##AB275762|SGSM2|9905|small G protein signaling modulator 2##AB449878|SGSM2|9905|small G protein signaling modulator 2##AK304263|SGSM2|9905|small G protein signaling modulator 2##NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##BX647255|METTL16|79066|methyltransferase like 16##AK294547|METTL16|79066|methyltransferase like 16##BC050603|METTL16|79066|methyltransferase like 16##BC001213|METTL16|79066|methyltransferase like 16##AL832612|METTL16|79066|methyltransferase like 16##AK027410|METTL16|79066|methyltransferase like 16##AK296464|METTL16|79066|methyltransferase like 16##NM_024086|METTL16|79066|methyltransferase like 16##NM_000430|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13386|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BX538346|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##AK313078|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13385|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BC064638|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	0.780149	CTCF.p2:17:0.780
chr9	71669252	71669367	reg1000438.p1	18.338	+	TSC_hg19_v1_chr9_+_71650693 BC048097 BC023633 CU690546	-18622	+	NM_000144 NM_001161706 NM_181425	-18831	+	DQ890764 DQ893927 AB463461 BC039888 NM_002732	-40286	-	NM_001170414 TSC_hg19_v1_chr9_+_71736198 AK295016	66892	+	AF083893 TSC_hg19_v1_chr9_+_71736397	67102	+	NM_001170630 NM_004817 NM_201629 BC027592 TSC_hg19_v1_chr9_+_71789110	119731	+	BC048097|FXN|2395|frataxin##BC023633|FXN|2395|frataxin##NM_000144|FXN|2395|frataxin##NM_001161706|FXN|2395|frataxin##NM_181425|FXN|2395|frataxin##DQ890764|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##DQ893927|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##BC039888|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_002732|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_001170414|TJP2|9414|tight junction protein 2 (zona occludens 2)##AK295016|TJP2|9414|tight junction protein 2 (zona occludens 2)##AF083893|TJP2|9414|tight junction protein 2 (zona occludens 2)##NM_001170630|TJP2|9414|tight junction protein 2 (zona occludens 2)##NM_004817|TJP2|9414|tight junction protein 2 (zona occludens 2)##NM_201629|TJP2|9414|tight junction protein 2 (zona occludens 2)##BC027592|TJP2|9414|tight junction protein 2 (zona occludens 2)	0.996014	CTCF.p2:-7:0.996
chr13	30687208	30687345	reg1000526.p1	18.330	+	TSC_hg19_v1_chr13_-_30424811 NM_007106	-262435	-	TSC_hg19_v1_chr13_-_30424719 AK056580	-262574	-	BC059385 BC044582 TSC_hg19_v1_chr13_-_30424481	-262870	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	193875	-	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	194293	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	352717	-	NM_007106|UBL3|5412|ubiquitin-like 3##AK056580|UBL3|5412|ubiquitin-like 3##BC059385|UBL3|5412|ubiquitin-like 3##BC044582|UBL3|5412|ubiquitin-like 3##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1	0.018285	
chr5	159772446	159772575	reg1000554.p1	18.329	+	AK294000 TSC_hg19_v1_chr5_-_159739572 BC035871 NM_024565 AK302823	-32966	-	NM_001445 X90908 U19869 CU692652	-116011	+	NM_001040442 AB528665	-146430	+	TSC_hg19_v1_chr5_-_159797619 BC054506 BC011699 AF329836 AB590457 AY358839 NM_031908	25122	-	BC032603 TSC_hg19_v1_chr5_-_159827053 NM_022090	54573	-	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	73595	-	AK294000|CCNJL|79616|cyclin J-like##BC035871|CCNJL|79616|cyclin J-like##NM_024565|CCNJL|79616|cyclin J-like##AK302823|CCNJL|79616|cyclin J-like##NM_001445|FABP6|2172|fatty acid binding protein 6, ileal##X90908|FABP6|2172|fatty acid binding protein 6, ileal##U19869|FABP6|2172|fatty acid binding protein 6, ileal##NM_001040442|FABP6|2172|fatty acid binding protein 6, ileal##BC054506|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##BC011699|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##AF329836|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##AY358839|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##NM_031908|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##BC032603|C5orf54|63920|chromosome 5 open reading frame 54##NM_022090|C5orf54|63920|chromosome 5 open reading frame 54##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)	0.643131	CTCF.p2:19:0.643
chr6	39271073	39271190	reg1000528.p1	18.328	+	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	-73891	-	TSC_hg19_v1_chr6_-_39082938 CR627244 AK001963 NM_018322 EU832483 EU832563 BC022007	-188285	-	AF086405 TSC_hg19_v1_chr6_-_39072506	-198672	-	AF358910 CU693040 DQ891712 DQ894889 EU978944 BC025726 AY358853 AF339912 AK310582 AK315273 NM_031460 NM_001135111	11034	-	AF358909 AY253145 AY253146 AY253147 BC111860 NM_001135105 NM_001135106 NM_001135107 NM_032115 EU978943	19208	-	BC117307 BC143444 BC143445 AK131471 NM_145027	422014	-	AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5##CR627244|C6orf64|55776|chromosome 6 open reading frame 64##AK001963|C6orf64|55776|chromosome 6 open reading frame 64##NM_018322|C6orf64|55776|chromosome 6 open reading frame 64##EU832483|C6orf64|55776|chromosome 6 open reading frame 64##EU832563|C6orf64|55776|chromosome 6 open reading frame 64##BC022007|C6orf64|55776|chromosome 6 open reading frame 64##AF086405|C6orf64|55776|chromosome 6 open reading frame 64##AF358910|KCNK17|89822|potassium channel, subfamily K, member 17##DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17##DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17##EU978944|KCNK17|89822|potassium channel, subfamily K, member 17##BC025726|KCNK17|89822|potassium channel, subfamily K, member 17##AY358853|KCNK17|89822|potassium channel, subfamily K, member 17##AF339912|KCNK17|89822|potassium channel, subfamily K, member 17##AK310582|KCNK17|89822|potassium channel, subfamily K, member 17##AK315273|KCNK17|89822|potassium channel, subfamily K, member 17##NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17##NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17##AF358909|KCNK16|83795|potassium channel, subfamily K, member 16##AY253145|KCNK16|83795|potassium channel, subfamily K, member 16##AY253146|KCNK16|83795|potassium channel, subfamily K, member 16##AY253147|KCNK16|83795|potassium channel, subfamily K, member 16##BC111860|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135105|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135106|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135107|KCNK16|83795|potassium channel, subfamily K, member 16##NM_032115|KCNK16|83795|potassium channel, subfamily K, member 16##EU978943|KCNK16|83795|potassium channel, subfamily K, member 16##BC117307|KIF6|221458|kinesin family member 6##BC143444|KIF6|221458|kinesin family member 6##BC143445|KIF6|221458|kinesin family member 6##AK131471|KIF6|221458|kinesin family member 6##NM_145027|KIF6|221458|kinesin family member 6	1.015936	CTCF.p2:10:0.999
chr1	110855332	110855448	reg1000426.p1	18.322	+	AK310193 M64676 TSC_hg19_v1_chr1_+_110754079 BC101769	-101393	+	TSC_hg19_v1_chr1_+_110753347 NM_001039574 NM_004978	-102046	+	NM_001010898 AK289982 TSC_hg19_v1_chr1_+_110693135	-162256	+	AF368062 AF368063 AF368064 NM_001201545 NM_022768 BC098140 BC103493 BC103507 BC103660 TSC_hg19_v1_chr1_+_110882045	26604	+	BC047479 TSC_hg19_v1_chr1_+_110882057	26667	+	TSC_hg19_v1_chr1_+_110882092 AK022541 BC006397 BC062316	26691	+	AK310193|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##M64676|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##BC101769|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_001039574|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_004978|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_001010898|SLC6A17|388662|solute carrier family 6, member 17##AK289982|SLC6A17|388662|solute carrier family 6, member 17##AF368062|RBM15|64783|RNA binding motif protein 15##AF368063|RBM15|64783|RNA binding motif protein 15##AF368064|RBM15|64783|RNA binding motif protein 15##NM_001201545|RBM15|64783|RNA binding motif protein 15##NM_022768|RBM15|64783|RNA binding motif protein 15##BC098140|RBM15|64783|RNA binding motif protein 15##BC103493|RBM15|64783|RNA binding motif protein 15##BC103507|RBM15|64783|RNA binding motif protein 15##BC103660|RBM15|64783|RNA binding motif protein 15##BC047479|RBM15|64783|RNA binding motif protein 15##AK022541|RBM15|64783|RNA binding motif protein 15##BC006397|RBM15|64783|RNA binding motif protein 15##BC062316|RBM15|64783|RNA binding motif protein 15	0.999447	CTCF.p2:5:0.999
chr14	77537104	77537241	reg1000314.p1	18.319	+	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-42112	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	-42488	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-244377	+	AK124327 TSC_hg19_v1_chr14_-_77542533	5361	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	27473	+	BC117676 TSC_hg19_v1_chr14_-_77608072	70843	-	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22	0.422875	CTCF.p2:17:0.423
chr11	68065310	68065445	reg1000324.p1	18.318	+	TSC_hg19_v1_chr11_-_68039453 NM_022338	-25919	-	TSC_hg19_v1_chr11_-_68039418 AF264781	-25991	-	TSC_hg19_v1_chr11_-_67981112 AF264782 BC002522 BC065287 BC087834 NM_016028 NM_017635 BC108304 AK314336 AK299201	-84398	-	TSC_hg19_v1_chr11_+_68080058 AB017498 NM_002335 AF077820 AF064548 BC150595 BC098397	14712	+	AF088027 TSC_hg19_v1_chr11_+_68115450	50059	+	TSC_hg19_v1_chr11_+_68228219 NM_001164160 NM_001164161 NM_001164162 NM_001164163 NM_001164164 NM_018312 BC070121 AK298180 AK303315 AK315136 CR936718 CR749815 CR933658 AB046778	162832	+	NM_022338|C11orf24|53838|chromosome 11 open reading frame 24##AF264781|C11orf24|53838|chromosome 11 open reading frame 24##AF264782|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC002522|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC065287|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC087834|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_016028|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_017635|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC108304|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK314336|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK299201|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AB017498|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_002335|LRP5|4041|low density lipoprotein receptor-related protein 5##AF077820|LRP5|4041|low density lipoprotein receptor-related protein 5##AF064548|LRP5|4041|low density lipoprotein receptor-related protein 5##BC150595|LRP5|4041|low density lipoprotein receptor-related protein 5##BC098397|LRP5|4041|low density lipoprotein receptor-related protein 5##AF088027|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_001164160|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164161|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164162|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164163|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164164|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_018312|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##BC070121|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK298180|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK303315|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK315136|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR936718|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR749815|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR933658|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AB046778|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	0.998746	CTCF.p2:3:0.999
chr15	67239181	67239317	reg1000488.p1	18.316	+	NM_001142861 U59914	-238320	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	-243690	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	-244575	+	TSC_hg19_v1_chr15_+_67358179 AK290881	118926	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	119152	+	NM_001145102 AK316017	178874	+	NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##AK290881|SMAD3|4088|SMAD family member 3##NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3	0.342963	CTCF.p2:-23:0.343
chr6	1604693	1604821	reg1000561.p1	18.310	+	NM_001452 U13220 AB463646	-214632	+	BC053850 NM_033260	-292083	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-911667	-	BC134421 NM_001453	5923	+	TSC_hg19_v1_chr6_+_1611545 BC169307	6817	+	AF040260 NM_001253846	571467	-	NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##BC169307|FOXC1|2296|forkhead box C1##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase	0.890998	CTCF.p2:-2:0.891
chr1	157060057	157060191	reg1000478.p1	18.309	+	BC057394 NM_014784 NM_198236	-44963	-	AK292342 NM_144702 BC033790	-169692	+	NM_001080471	-196602	+	AK131392 NM_001004341	9475	-	TSC_hg19_v1_chr1_-_157108158 L16464	48026	-	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	48159	-	BC057394|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_014784|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_198236|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##AK292342|LRRC71|149499|leucine rich repeat containing 71##NM_144702|LRRC71|149499|leucine rich repeat containing 71##BC033790|LRRC71|149499|leucine rich repeat containing 71##NM_001080471|PEAR1|375033|platelet endothelial aggregation receptor 1##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##L16464|ETV3|2117|ets variant 3##BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3	0.999924	CTCF.p2:-17:1.000
chr11	66346615	66346734	reg1000512.p1	18.302	+	DQ893245 AJ007331 TSC_hg19_v1_chr11_-_66336078 AK313657 BC036451 AF136279 BC011682 BC013359 AF088886 NM_003793	-10649	-	AK313556 BC096323 BC099647 BC099648 BC099649 M86407 NM_001104	-32293	+	TSC_hg19_v1_chr11_-_66313539 AY358448 NM_207340 AK301787 AK310561	-33067	-	CU689898 TSC_hg19_v1_chr11_-_66360516 AK001648 BC034469 NM_018219	13847	-	TSC_hg19_v1_chr11_+_66360672 AY113179 AF002210 NM_005125 BC105016 BC112055 CR541928	14024	+	NM_001198836 NM_001198837 NM_001198845 NM_001198846 NM_006328 TSC_hg19_v1_chr11_+_66384100 AF315632 AF315633 EU287938 AK222830 AK297907 AK307254 AK021768 AK292805 AF080561 BC000488 BC023619 DQ294957 EU287939 EU446504	37447	+	DQ893245|CTSF|8722|cathepsin F##AJ007331|CTSF|8722|cathepsin F##AK313657|CTSF|8722|cathepsin F##BC036451|CTSF|8722|cathepsin F##AF136279|CTSF|8722|cathepsin F##BC011682|CTSF|8722|cathepsin F##BC013359|CTSF|8722|cathepsin F##AF088886|CTSF|8722|cathepsin F##NM_003793|CTSF|8722|cathepsin F##AK313556|ACTN3|89|actinin, alpha 3##BC096323|ACTN3|89|actinin, alpha 3##BC099647|ACTN3|89|actinin, alpha 3##BC099648|ACTN3|89|actinin, alpha 3##BC099649|ACTN3|89|actinin, alpha 3##M86407|ACTN3|89|actinin, alpha 3##NM_001104|ACTN3|89|actinin, alpha 3##AY358448|ZDHHC24|254359|zinc finger, DHHC-type containing 24##NM_207340|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AK301787|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AK310561|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AK001648|CCDC87|55231|coiled-coil domain containing 87##BC034469|CCDC87|55231|coiled-coil domain containing 87##NM_018219|CCDC87|55231|coiled-coil domain containing 87##AY113179|CCS|9973|copper chaperone for superoxide dismutase##AF002210|CCS|9973|copper chaperone for superoxide dismutase##NM_005125|CCS|9973|copper chaperone for superoxide dismutase##BC105016|CCS|9973|copper chaperone for superoxide dismutase##BC112055|CCS|9973|copper chaperone for superoxide dismutase##CR541928|CCS|9973|copper chaperone for superoxide dismutase##NM_001198836|RBM14|10432|RNA binding motif protein 14##NM_001198837|RBM14|10432|RNA binding motif protein 14##NM_001198845|RBM14-RBM4|100526737|RBM14-RBM4 readthrough##NM_001198846|RBM14-RBM4|100526737|RBM14-RBM4 readthrough##NM_006328|RBM14|10432|RNA binding motif protein 14##AF315632|RBM14|10432|RNA binding motif protein 14##AF315633|RBM14|10432|RNA binding motif protein 14##AK222830|RBM14|10432|RNA binding motif protein 14##AK021768|RBM14|10432|RNA binding motif protein 14##AF080561|RBM14|10432|RNA binding motif protein 14##BC000488|RBM14|10432|RNA binding motif protein 14##BC023619|RBM14|10432|RNA binding motif protein 14##DQ294957|RBM14|10432|RNA binding motif protein 14##EU446504|RBM14|10432|RNA binding motif protein 14	0.0556	
chr2	120399267	120399391	reg1000525.p1	18.302	+	AK293665 NM_001029996 TSC_hg19_v1_chr2_+_120302024 BC036530 AK304416	-97287	+	TSC_hg19_v1_chr2_-_120282060 BC035757	-117266	-	TSC_hg19_v1_chr2_-_120282018 AK314638 NM_002980	-117310	-	TSC_hg19_v1_chr2_+_120436745 AK130088 NM_001105198 NM_001105199 NM_030577 AK096890 AK299078 BC004404	37405	+	TSC_hg19_v1_chr2_+_120436776 AK057313 AK308503 AK311734	37452	+	M68941 NM_002830 TSC_hg19_v1_chr2_+_120517497 AK314836 BC010674	118071	+	AK293665|PCDP1|200373|primary ciliary dyskinesia protein 1##NM_001029996|PCDP1|200373|primary ciliary dyskinesia protein 1##BC036530|PCDP1|200373|primary ciliary dyskinesia protein 1##AK304416|PCDP1|200373|primary ciliary dyskinesia protein 1##BC035757|SCTR|6344|secretin receptor##AK314638|SCTR|6344|secretin receptor##NM_002980|SCTR|6344|secretin receptor##AK130088|TMEM177|80775|transmembrane protein 177##NM_001105198|TMEM177|80775|transmembrane protein 177##NM_001105199|TMEM177|80775|transmembrane protein 177##NM_030577|TMEM177|80775|transmembrane protein 177##AK096890|TMEM177|80775|transmembrane protein 177##AK299078|TMEM177|80775|transmembrane protein 177##BC004404|TMEM177|80775|transmembrane protein 177##AK057313|LOC100125918|100125918|uncharacterized LOC100125918##AK308503|TMEM177|80775|transmembrane protein 177##M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	0.999146	CTCF.p2:0:0.999
chr9	93518177	93518301	reg1000291.p1	18.287	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	-113120	-	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-1298258	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-1405232	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	45797	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	45828	+	TSC_hg19_v1_chr9_+_93564079 L28824	45839	+	BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase##L28824|SYK|6850|spleen tyrosine kinase	1.52733	CTCF.p2:42:0.966	CTCF.p2:-61:0.562
chr12	120666275	120666403	reg1000533.p1	18.283	+	AK001313 AK129823 M17885 TSC_hg19_v1_chr12_-_120638914 NM_001002 NM_053275	-27377	-	AK129754 AK222571 AK304674 BC107717 D28418 TSC_hg19_v1_chr12_-_120638911 AK222468 AK291109	-27429	-	BC019014 BC000087 TSC_hg19_v1_chr12_-_120638906 BC070194	-27438	-	BX648777 NM_025157	21620	-	TSC_hg19_v1_chr12_-_120703534 AK299486 BC136787 BC136794 BC144410 U14588 AB209034 AK298057 AK314204	37175	-	TSC_hg19_v1_chr12_-_120703574 NM_001080855 NM_001243756 NM_002859	37251	-	AK001313|RPLP0|6175|ribosomal protein, large, P0##AK129823|RPLP0|6175|ribosomal protein, large, P0##M17885|RPLP0|6175|ribosomal protein, large, P0##NM_001002|RPLP0|6175|ribosomal protein, large, P0##NM_053275|RPLP0|6175|ribosomal protein, large, P0##AK129754|RPLP0|6175|ribosomal protein, large, P0##AK222571|RPLP0|6175|ribosomal protein, large, P0##AK304674|RPLP0|6175|ribosomal protein, large, P0##BC107717|RPLP0|6175|ribosomal protein, large, P0##D28418|RPLP0|6175|ribosomal protein, large, P0##AK222468|RPLP0|6175|ribosomal protein, large, P0##AK291109|RPLP0|6175|ribosomal protein, large, P0##BC019014|RPLP0|6175|ribosomal protein, large, P0##BC000087|RPLP0|6175|ribosomal protein, large, P0##BC070194|RPLP0|6175|ribosomal protein, large, P0##BX648777|PXN|5829|paxillin##NM_025157|PXN|5829|paxillin##AK299486|PXN|5829|paxillin##BC136787|PXN|5829|paxillin##BC136794|PXN|5829|paxillin##BC144410|PXN|5829|paxillin##U14588|PXN|5829|paxillin##AB209034|PXN|5829|paxillin##AK298057|PXN|5829|paxillin##AK314204|PXN|5829|paxillin##NM_001080855|PXN|5829|paxillin##NM_001243756|PXN|5829|paxillin##NM_002859|PXN|5829|paxillin	0.999372	CTCF.p2:-18:0.999
chr7	38147167	38147288	reg1000288.p2	18.283	+	NM_001242948 AK309180	-186300	+	BC000686 AK290885 TSC_hg19_v1_chr7_+_37960509 DQ914439 AJ250475	-186674	+	AY027862 NM_001242946 NM_017549 TSC_hg19_v1_chr7_+_37960259 BC018299	-187004	+	NM_032016 AK315404 TSC_hg19_v1_chr7_+_38217846	70601	+	TSC_hg19_v1_chr7_+_38217932 AK091579 AX747072 AJ492267 AY358645 BC005959	70731	+	BC062761 BC105589 AF151103 NM_001003799 NM_001003806	166012	-	NM_001242948|EPDR1|54749|ependymin related protein 1 (zebrafish)##AK309180|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC000686|EPDR1|54749|ependymin related protein 1 (zebrafish)##AK290885|EPDR1|54749|ependymin related protein 1 (zebrafish)##DQ914439|EPDR1|54749|ependymin related protein 1 (zebrafish)##AJ250475|EPDR1|54749|ependymin related protein 1 (zebrafish)##AY027862|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_001242946|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_017549|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC018299|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_032016|STARD3NL|83930|STARD3 N-terminal like##AK315404|STARD3NL|83930|STARD3 N-terminal like##AK091579|STARD3NL|83930|STARD3 N-terminal like##AJ492267|STARD3NL|83930|STARD3 N-terminal like##AY358645|STARD3NL|83930|STARD3 N-terminal like##BC005959|STARD3NL|83930|STARD3 N-terminal like##BC062761|TRGV9|6983|T cell receptor gamma variable 9##BC105589|TARP|445347|TCR gamma alternate reading frame protein##AF151103|TARP|445347|TCR gamma alternate reading frame protein##NM_001003799|TARP|445347|TCR gamma alternate reading frame protein##NM_001003806|TARP|445347|TCR gamma alternate reading frame protein	0.018294	
chr10	103769712	103769825	reg1000298.p2	18.281	+	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	-166161	-	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	-170156	-	TSC_hg19_v1_chr10_-_103578213 NM_001142434 NM_012215	-191550	-	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	46144	-	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	55374	+	AK300588 TSC_hg19_v1_chr10_-_103874641	104851	-	BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##NM_001142434|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##NM_012215|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6##AK300588|LDB1|8861|LIM domain binding 1	0.03193	
chr11	73372092	73372212	reg1000319.p2	18.281	+	AK290109 NM_001130036	-12418	+	NM_001130034 NM_001130035 BC008075 AB209716 AK289620 TSC_hg19_v1_chr11_+_73358695 AK296033 AK301299 AF093249 AF100612 AK289909 AK311158	-13489	+	AF101054 NM_001130033 NM_021200 U89715	-14930	+	AK301534 NM_001243719	98984	-	BC034996 TSC_hg19_v1_chr11_-_73472120 BC003617 AK309311 AK223551 AK289748 BC096818 AK057157 BC068486 NM_001243718 NM_002869 NM_198896	99995	-	AF161408 TSC_hg19_v1_chr11_+_73498935 AK297746 NM_016055 BC009764 AK309219 AK310005	126774	+	AK290109|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130036|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130034|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130035|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##BC008075|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AB209716|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289620|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK296033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK301299|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF093249|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF100612|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289909|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK311158|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF101054|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_021200|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##U89715|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK301534|RAB6A|5870|RAB6A, member RAS oncogene family##NM_001243719|RAB6A|5870|RAB6A, member RAS oncogene family##BC034996|RAB6A|5870|RAB6A, member RAS oncogene family##BC003617|RAB6A|5870|RAB6A, member RAS oncogene family##AK309311|RAB6A|5870|RAB6A, member RAS oncogene family##AK223551|RAB6A|5870|RAB6A, member RAS oncogene family##AK289748|RAB6A|5870|RAB6A, member RAS oncogene family##BC096818|RAB6A|5870|RAB6A, member RAS oncogene family##AK057157|RAB6A|5870|RAB6A, member RAS oncogene family##BC068486|RAB6A|5870|RAB6A, member RAS oncogene family##NM_001243718|RAB6A|5870|RAB6A, member RAS oncogene family##NM_002869|RAB6A|5870|RAB6A, member RAS oncogene family##NM_198896|RAB6A|5870|RAB6A, member RAS oncogene family##AF161408|MRPL48|51642|mitochondrial ribosomal protein L48##AK297746|MRPL48|51642|mitochondrial ribosomal protein L48##NM_016055|MRPL48|51642|mitochondrial ribosomal protein L48##BC009764|MRPL48|51642|mitochondrial ribosomal protein L48##AK309219|MRPL48|51642|mitochondrial ribosomal protein L48##AK310005|MRPL48|51642|mitochondrial ribosomal protein L48	0.984977	CTCF.p2:10:0.985
chr14	105030473	105030590	reg1000317.p2	18.280	+	TSC_hg19_v1_chr14_+_104605441 AB033062	-425079	+	NM_015656	-425472	+	AX781433 BX247999 NM_001080464 AX721044 BC035836 BC136637 AX781428 AX781429 AX781430 AX781431 AX781435	-478470	+	AK095913 NM_001008404 AK297818 AK309489 BC041103	15555	+	AB464314 AK124477 NM_207379	40557	-	TSC_hg19_v1_chr14_+_105147469 BC035345	116931	+	AB033062|KIF26A|26153|kinesin family member 26A##NM_015656|KIF26A|26153|kinesin family member 26A##AX781433|ASPG|374569|asparaginase homolog (S. cerevisiae)##BX247999|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_001080464|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC035836|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC136637|ASPG|374569|asparaginase homolog (S. cerevisiae)##AX781435|ASPG|374569|asparaginase homolog (S. cerevisiae)##AK095913|C14orf180|400258|chromosome 14 open reading frame 180##NM_001008404|C14orf180|400258|chromosome 14 open reading frame 180##AK297818|C14orf180|400258|chromosome 14 open reading frame 180##AK309489|C14orf180|400258|chromosome 14 open reading frame 180##BC041103|C14orf180|400258|chromosome 14 open reading frame 180##AK124477|TMEM179|388021|transmembrane protein 179##NM_207379|TMEM179|388021|transmembrane protein 179	0.999591	CTCF.p2:8:1.000
chr15	41074940	41075064	reg1000407.p1	18.277	+	NM_001130448 BC027487 AK291344	-12785	+	TSC_hg19_v1_chr15_+_41056274 AK223430 AK311872 NM_005258 BC112262 BC112264 BC143904 HQ258032	-18694	+	TSC_hg19_v1_chr15_-_41047453 AK001441 NM_018145 AK123192	-27538	-	TSC_hg19_v1_chr15_+_41099254 NM_001077268 AK122779 BC015738 AF445414	24340	+	AB528922 AK001496 AK308659 TSC_hg19_v1_chr15_-_41099659 BC000048	24651	-	TSC_hg19_v1_chr15_-_41099672 AK308858 AK309307 AK310140 NM_018163	24672	-	NM_001130448|C15orf62|643338|chromosome 15 open reading frame 62##BC027487|C15orf62|643338|chromosome 15 open reading frame 62##AK291344|C15orf62|643338|chromosome 15 open reading frame 62##AK223430|GCHFR|2644|GTP cyclohydrolase I feedback regulator##AK311872|GCHFR|2644|GTP cyclohydrolase I feedback regulator##NM_005258|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112262|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112264|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC143904|GCHFR|2644|GTP cyclohydrolase I feedback regulator##HQ258032|GCHFR|2644|GTP cyclohydrolase I feedback regulator##AK001441|FAM82A2|55177|family with sequence similarity 82, member A2##NM_018145|FAM82A2|55177|family with sequence similarity 82, member A2##AK123192|FAM82A2|55177|family with sequence similarity 82, member A2##NM_001077268|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AK122779|ZFYVE19|84936|zinc finger, FYVE domain containing 19##BC015738|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AF445414|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AK001496|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##AK308659|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##BC000048|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##AK308858|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##AK309307|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##AK310140|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##NM_018163|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17	0.998266	CTCF.p2:9:0.998
chr2	20335511	20335637	reg1000553.p1	18.275	+	NM_014713	-83786	-	TSC_hg19_v1_chr2_-_20251415 AY359028 D14696 BC003158 AK129875	-84147	-	CR456758 TSC_hg19_v1_chr2_-_20251382 BC000421 AK304433 BC093075	-84236	-	X60306 AB464260 CU679093 DQ893265 DQ896595 TSC_hg19_v1_chr2_-_20424892 AK299385 J05392 AK313974 AK222739 BC008765 AJ551176 AK311409 NM_002997	89213	-	TSC_hg19_v1_chr2_-_20425168 NM_001006946	89605	-	AF272350 TSC_hg19_v1_chr2_-_20512079	176475	-	NM_014713|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AY359028|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##D14696|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC003158|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK129875|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##CR456758|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC000421|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK304433|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC093075|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##X60306|SDC1|6382|syndecan 1##DQ893265|SDC1|6382|syndecan 1##DQ896595|SDC1|6382|syndecan 1##AK299385|SDC1|6382|syndecan 1##J05392|SDC1|6382|syndecan 1##AK313974|SDC1|6382|syndecan 1##AK222739|SDC1|6382|syndecan 1##BC008765|SDC1|6382|syndecan 1##AJ551176|SDC1|6382|syndecan 1##NM_002997|SDC1|6382|syndecan 1##NM_001006946|SDC1|6382|syndecan 1##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)	0.973994	CTCF.p2:-6:0.974
chr6	71594177	71594311	reg1000559.p1	18.272	+	TSC_hg19_v1_chr6_+_71377620 AK315579 BC028074 BC008672 AK303387 BC036123 AK023221 AY055003 AY055004 AK222711 AK290448 CU688386	-216589	+	TSC_hg19_v1_chr6_+_71377511 NM_001044305 NM_021940 AF442495	-216721	+	TSC_hg19_v1_chr6_+_71276632 BC018085 NM_145267 BC104649 GQ129294 GQ129295	-317619	+	AB075843 NM_080742	72519	-	NM_024576 TSC_hg19_v1_chr6_+_71998479	404242	+	TSC_hg19_v1_chr6_+_71998513 BC018688	404266	+	AK315579|SMAP1|60682|small ArfGAP 1##BC028074|SMAP1|60682|small ArfGAP 1##BC008672|SMAP1|60682|small ArfGAP 1##AK303387|SMAP1|60682|small ArfGAP 1##BC036123|SMAP1|60682|small ArfGAP 1##AK023221|SMAP1|60682|small ArfGAP 1##AY055003|SMAP1|60682|small ArfGAP 1##AY055004|SMAP1|60682|small ArfGAP 1##AK222711|SMAP1|60682|small ArfGAP 1##AK290448|SMAP1|60682|small ArfGAP 1##NM_001044305|SMAP1|60682|small ArfGAP 1##NM_021940|SMAP1|60682|small ArfGAP 1##AF442495|SMAP1|60682|small ArfGAP 1##BC018085|C6orf57|135154|chromosome 6 open reading frame 57##NM_145267|C6orf57|135154|chromosome 6 open reading frame 57##BC104649|C6orf57|135154|chromosome 6 open reading frame 57##GQ129294|C6orf57|135154|chromosome 6 open reading frame 57##GQ129295|C6orf57|135154|chromosome 6 open reading frame 57##AB075843|B3GAT2|135152|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)##NM_080742|B3GAT2|135152|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)##NM_024576|OGFRL1|79627|opioid growth factor receptor-like 1##BC018688|OGFRL1|79627|opioid growth factor receptor-like 1	0.997529	CTCF.p2:17:0.998
chr17	42611016	42611125	reg1000296.p2	18.270	+	TSC_hg19_v1_chr17_-_42580958 NM_001002909	-30098	-	TSC_hg19_v1_chr17_-_42580760 BC136629 BC144323 AK025600 BC140010	-30306	-	AB528003 J02764 BC117443 BC126442 AK297155 AK315335 M34480 NM_000419	-144214	-	TSC_hg19_v1_chr17_+_42634696 NM_001466 BC052266 L37882 BC113402 BC113404 AB017364 AB590852	23756	+	TSC_hg19_v1_chr17_+_42733745 NM_001145080	122682	+	TSC_hg19_v1_chr17_-_42767190 CU690504 BC023298 AL833590 AK056357 BC047776 BX648868 NM_001099225 NM_144609	156058	-	NM_001002909|GPATCH8|23131|G patch domain containing 8##BC136629|GPATCH8|23131|G patch domain containing 8##BC144323|GPATCH8|23131|G patch domain containing 8##AK025600|GPATCH8|23131|G patch domain containing 8##BC140010|GPATCH8|23131|G patch domain containing 8##J02764|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC117443|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC126442|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK297155|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK315335|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##M34480|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##NM_000419|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##NM_001466|FZD2|2535|frizzled family receptor 2##BC052266|FZD2|2535|frizzled family receptor 2##L37882|FZD2|2535|frizzled family receptor 2##BC113402|FZD2|2535|frizzled family receptor 2##BC113404|FZD2|2535|frizzled family receptor 2##AB017364|FZD2|2535|frizzled family receptor 2##NM_001145080|C17orf104|284071|chromosome 17 open reading frame 104##BC023298|CCDC43|124808|coiled-coil domain containing 43##AL833590|CCDC43|124808|coiled-coil domain containing 43##AK056357|CCDC43|124808|coiled-coil domain containing 43##BC047776|CCDC43|124808|coiled-coil domain containing 43##BX648868|CCDC43|124808|coiled-coil domain containing 43##NM_001099225|CCDC43|124808|coiled-coil domain containing 43##NM_144609|CCDC43|124808|coiled-coil domain containing 43	0.999661	CTCF.p2:-5:1.000
chr5	153847371	153847486	reg1000287.p1	18.268	+	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	-21818	+	TSC_hg19_v1_chr5_+_153825535 AK021588 NM_001131062 NM_001131063 NM_024632	-21909	+	TSC_hg19_v1_chr5_-_153825380 BC042059 AK095428	-22061	-	TSC_hg19_v1_chr5_-_153857790 BC021190	10360	-	TSC_hg19_v1_chr5_-_153857823 AF061756 NM_004821	10394	-	BC001460 NM_015315 CU674716	245045	+	AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like##AK021588|SAP30L|79685|SAP30-like##NM_001131062|SAP30L|79685|SAP30-like##NM_001131063|SAP30L|79685|SAP30-like##NM_024632|SAP30L|79685|SAP30-like##BC042059|FLJ38109|386627|uncharacterized LOC386627##AK095428|FLJ38109|386627|uncharacterized LOC386627##BC021190|HAND1|9421|heart and neural crest derivatives expressed 1##AF061756|HAND1|9421|heart and neural crest derivatives expressed 1##NM_004821|HAND1|9421|heart and neural crest derivatives expressed 1##BC001460|LARP1|23367|La ribonucleoprotein domain family, member 1##NM_015315|LARP1|23367|La ribonucleoprotein domain family, member 1	0.999896	CTCF.p2:-7:1.000
chr7	55482998	55483134	reg1000660.p1	18.267	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	-49494	+	AK095857 NM_018697	-49926	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-396120	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	156974	-	TSC_hg19_v1_chr7_-_55640073 AB097004	157016	-	BC016650 AK314338 TSC_hg19_v1_chr7_-_55640107	157039	-	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AB097004|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##BC016650|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK314338|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	0.999953	CTCF.p2:15:1.000
chr12	106780138	106780265	reg1000633.p1	18.266	+	NM_001160708 AK122713	-28332	+	TSC_hg19_v1_chr12_+_106751589 BC046238 AK291635 AY092084	-28624	+	NM_018082 TSC_hg19_v1_chr12_+_106751498 BX537447	-28731	+	AB095366 NM_213594 TSC_hg19_v1_chr12_+_106976698 AK291445	196490	+	NM_001206691 AB095365 AK302837 AB044245	214730	+	BC028582 NM_032491 AF332192 AK315698 BC030644 CU688514 CU688962 DQ890831 DQ893986	298332	+	NM_001160708|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AK122713|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BC046238|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AK291635|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AY092084|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AB095366|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_213594|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK291445|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_001206691|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095365|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK302837|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB044245|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##BC028582|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_032491|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AF332192|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK315698|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##BC030644|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ890831|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ893986|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)	0.999634	CTCF.p2:-26:1.000
chr10	81689284	81689396	reg1000331.p2	18.257	+	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	-318636	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	-369189	-	BC070048 NM_001099692	-416984	+	BC022318 NM_003019	19520	-	TSC_hg19_v1_chr10_+_81838420 AK222536 AK023325 BC022252 NM_025125 CR457310	149096	+	BC066348 BC090922 NM_001012973	202917	+	AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##BC022318|SFTPD|6441|surfactant protein D##NM_003019|SFTPD|6441|surfactant protein D##AK222536|FAM213A|80195|family with sequence similarity 213, member A##AK023325|FAM213A|80195|family with sequence similarity 213, member A##BC022252|FAM213A|80195|family with sequence similarity 213, member A##NM_025125|FAM213A|80195|family with sequence similarity 213, member A##CR457310|FAM213A|80195|family with sequence similarity 213, member A##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9	0.999609	CTCF.p2:10:1.000
chr1	22458519	22458649	reg1000364.p1	18.257	+	TSC_hg19_v1_chr1_+_22379812 AL121737	-78779	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	-79414	+	TSC_hg19_v1_chr1_+_22352003 AF161506 BC016053	-106572	+	AY009398 BT020125 AB590593 AB061675 AY358947 AF316543 NM_030761 BC057781	10927	-	AK091019 AK095273 AX746732 NM_001083621 NM_014870 TSC_hg19_v1_chr1_+_22778343	319760	+	TSC_hg19_v1_chr1_+_22778350 AB007947 BC114607	319842	+	AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AF161506|LINC00339|29092|long intergenic non-protein coding RNA 339##BC016053|LINC00339|29092|long intergenic non-protein coding RNA 339##AY009398|WNT4|54361|wingless-type MMTV integration site family, member 4##BT020125|WNT4|54361|wingless-type MMTV integration site family, member 4##AB061675|WNT4|54361|wingless-type MMTV integration site family, member 4##AY358947|WNT4|54361|wingless-type MMTV integration site family, member 4##AF316543|WNT4|54361|wingless-type MMTV integration site family, member 4##NM_030761|WNT4|54361|wingless-type MMTV integration site family, member 4##BC057781|WNT4|54361|wingless-type MMTV integration site family, member 4##AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40##AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40##AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40##BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40	0.99947	CTCF.p2:-13:0.999
chr16	88593966	88594088	reg1000469.p1	18.256	+	TSC_hg19_v1_chr16_+_88519921 NM_153813	-74062	+	TSC_hg19_v1_chr16_+_88519687 AF488691	-74322	+	NM_001127464	-100149	+	TSC_hg19_v1_chr16_+_88636807 NM_144604	42705	+	AK300254 AK302716 TSC_hg19_v1_chr16_+_88636810	42783	+	AK056632 AK225807 TSC_hg19_v1_chr16_+_88636823	42801	+	NM_153813|ZFPM1|161882|zinc finger protein, multitype 1##AF488691|ZFPM1|161882|zinc finger protein, multitype 1##NM_001127464|ZNF469|84627|zinc finger protein 469##NM_144604|ZC3H18|124245|zinc finger CCCH-type containing 18##AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18##AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18##AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18	0.811467	CTCF.p2:14:0.811
chr3	124187156	124187290	reg1000623.p1	18.253	+	TSC_hg19_v1_chr3_+_124103674 AK131379	-83600	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-373618	+	AF303889 NM_017578	-477025	-	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	116305	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	262016	+	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	262093	+	AK131379|KALRN|8997|kalirin, RhoGEF kinase##AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase##AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase	0.841702	CTCF.p2:13:0.681
chr1	159861461	159861606	reg1000428.p1	18.251	+	HQ258612 BC132893 BC132895 NM_001013661	-29155	-	AK096506 NM_001134233	-36397	-	TSC_hg19_v1_chr1_+_159796662 BC109194	-64864	+	BC089391 BC027874 NM_012337 BC064386 AF094758 AK308262 AK225566 AK225582 AK292249	8392	-	BC009357 TSC_hg19_v1_chr1_-_159895269	33732	-	TSC_hg19_v1_chr1_-_159895294 BC002616 D21261 GU727636 NM_003564 AK291562 AK298654	33754	-	HQ258612|VSIG8|391123|V-set and immunoglobulin domain containing 8##BC132893|VSIG8|391123|V-set and immunoglobulin domain containing 8##BC132895|VSIG8|391123|V-set and immunoglobulin domain containing 8##NM_001013661|VSIG8|391123|V-set and immunoglobulin domain containing 8##AK096506|C1orf204|284677|chromosome 1 open reading frame 204##NM_001134233|C1orf204|284677|chromosome 1 open reading frame 204##BC109194|SLAMF8|56833|SLAM family member 8##BC089391|CCDC19|25790|coiled-coil domain containing 19##BC027874|CCDC19|25790|coiled-coil domain containing 19##NM_012337|CCDC19|25790|coiled-coil domain containing 19##BC064386|CCDC19|25790|coiled-coil domain containing 19##AF094758|CCDC19|25790|coiled-coil domain containing 19##AK308262|CCDC19|25790|coiled-coil domain containing 19##AK225566|CCDC19|25790|coiled-coil domain containing 19##AK225582|CCDC19|25790|coiled-coil domain containing 19##AK292249|CCDC19|25790|coiled-coil domain containing 19##BC009357|TAGLN2|8407|transgelin 2##BC002616|TAGLN2|8407|transgelin 2##D21261|TAGLN2|8407|transgelin 2##GU727636|TAGLN2|8407|transgelin 2##NM_003564|TAGLN2|8407|transgelin 2##AK291562|TAGLN2|8407|transgelin 2##AK298654|TAGLN2|8407|transgelin 2	1.894743	CTCF.p2:-22:0.991	CTCF.p2:40:0.904
chr9	74640018	74640144	reg1000645.p1	18.242	+	TSC_hg19_v1_chr9_+_74526557 AK311206 BC028019 BC052375 AK307186 CU690912	-113493	+	TSC_hg19_v1_chr9_+_74526393 NM_182505 BC010179	-113680	+	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	-113925	-	BC044620 BC053956 BC036255 NM_001128618	35428	-	AK300418 NM_001242507	89429	+	NM_001242505 NM_001242506 NM_004293 TSC_hg19_v1_chr9_+_74764283 BC053584	124198	+	AK311206|C9orf85|138241|chromosome 9 open reading frame 85##BC028019|C9orf85|138241|chromosome 9 open reading frame 85##BC052375|C9orf85|138241|chromosome 9 open reading frame 85##AK307186|C9orf85|138241|chromosome 9 open reading frame 85##NM_182505|C9orf85|138241|chromosome 9 open reading frame 85##BC010179|C9orf85|138241|chromosome 9 open reading frame 85##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1##BC044620|C9orf57|138240|chromosome 9 open reading frame 57##BC053956|C9orf57|138240|chromosome 9 open reading frame 57##BC036255|C9orf57|138240|chromosome 9 open reading frame 57##NM_001128618|C9orf57|138240|chromosome 9 open reading frame 57##AK300418|GDA|9615|guanine deaminase##NM_001242507|GDA|9615|guanine deaminase##NM_001242505|GDA|9615|guanine deaminase##NM_001242506|GDA|9615|guanine deaminase##NM_004293|GDA|9615|guanine deaminase##BC053584|GDA|9615|guanine deaminase	0.999293	CTCF.p2:12:0.999
chr10	131988482	131988611	reg1000410.p1	18.238	+	TSC_hg19_v1_chr10_+_131934681 AJ010841 AB463691	-53831	+	TSC_hg19_v1_chr10_+_131934675 AF118649 AK225609	-53871	+	TSC_hg19_v1_chr10_+_131934662 NM_001199868 NM_006541 BC005289 AK022131 AF118652	-53891	+	TSC_hg19_v1_chr10_-_133109808 BC093639 BC101535	1121274	-	BC042951 NM_174937 TSC_hg19_v1_chr10_-_133110013	1121455	-	CU692440 AB528671 U15174 BC009342 BC080643 TSC_hg19_v1_chr10_-_133795428 AK222626 AK295136 BC021989 AF002697 NM_004052	1806830	-	AJ010841|GLRX3|10539|glutaredoxin 3##AF118649|GLRX3|10539|glutaredoxin 3##AK225609|GLRX3|10539|glutaredoxin 3##NM_001199868|GLRX3|10539|glutaredoxin 3##NM_006541|GLRX3|10539|glutaredoxin 3##BC005289|GLRX3|10539|glutaredoxin 3##AK022131|GLRX3|10539|glutaredoxin 3##AF118652|GLRX3|10539|glutaredoxin 3##BC093639|TCERG1L|256536|transcription elongation regulator 1-like##BC101535|TCERG1L|256536|transcription elongation regulator 1-like##BC042951|TCERG1L|256536|transcription elongation regulator 1-like##NM_174937|TCERG1L|256536|transcription elongation regulator 1-like##U15174|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC009342|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC080643|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK222626|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK295136|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC021989|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AF002697|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_004052|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3	0.164663	
chr16	77270062	77270181	reg1000363.p1	18.238	+	NM_001129979 TSC_hg19_v1_chr16_+_77233375	-36760	+	AF442486 AB463127 TSC_hg19_v1_chr16_+_77225481	-44696	+	TSC_hg19_v1_chr16_+_77225109 AB020679	-44965	+	AK293831 BC063283 NM_199355	198849	-	NM_001105663 NM_001243657 NM_001243660 NM_001243661 TSC_hg19_v1_chr16_+_77756410 AK296963 EU981826	486312	+	TSC_hg19_v1_chr16_+_77822482 AK290153 BC033537 NM_020927 AB046796 CU689646	552368	+	NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like##AF442486|MON1B|22879|MON1 homolog B (yeast)##AB020679|MON1B|22879|MON1 homolog B (yeast)##AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_001105663|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243657|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243660|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243661|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK296963|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##EU981826|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK290153|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##BC033537|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_020927|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AB046796|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like	1.95905	CTCF.p2:29:0.978	CTCF.p2:-49:0.981
chr15	38295239	38295362	reg1000538.p1	18.226	+	BC029221 NM_152453	-67844	+	TSC_hg19_v1_chr15_-_37393466 BC050431 NM_001220482 NM_002399 BC001516 BC001844 BC007202 AK300247	-901858	-	TSC_hg19_v1_chr15_-_37392751 AK056216 NM_170674 NM_170675 NM_170676 NM_170677	-902744	-	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	249095	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	249722	+	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	451045	+	BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##BC050431|MEIS2|4212|Meis homeobox 2##NM_001220482|MEIS2|4212|Meis homeobox 2##NM_002399|MEIS2|4212|Meis homeobox 2##BC001516|MEIS2|4212|Meis homeobox 2##BC001844|MEIS2|4212|Meis homeobox 2##BC007202|MEIS2|4212|Meis homeobox 2##AK300247|MEIS2|4212|Meis homeobox 2##AK056216|MEIS2|4212|Meis homeobox 2##NM_170674|MEIS2|4212|Meis homeobox 2##NM_170675|MEIS2|4212|Meis homeobox 2##NM_170676|MEIS2|4212|Meis homeobox 2##NM_170677|MEIS2|4212|Meis homeobox 2##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B	0.042304	
chr8	11411354	11411496	reg1000616.p1	18.226	+	S76617 NM_001715 BC018703 BC004473 BC038555	-59832	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-87196	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-206421	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	150295	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	215843	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	248759	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.142218	
chr11	75243535	75243651	reg1000504.p1	18.223	+	AF318377 TSC_hg19_v1_chr11_-_75236890	-6715	-	BC090053 AF318351 NM_030792	-7085	-	TSC_hg19_v1_chr11_-_75141540 NM_001039548	-101998	-	NM_001207014 NM_001235 TSC_hg19_v1_chr11_+_75273168 AK290124	29542	+	TSC_hg19_v1_chr11_+_75273296 AK297811 AK130870 AK309905 BC070087 BC014623 D83174 AY264853 BC036298 AK122936	29736	+	TSC_hg19_v1_chr11_-_75379154 BC063860 BC041411	135562	-	AF318377|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##NM_001039548|KLHL35|283212|kelch-like 35 (Drosophila)##NM_001207014|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##NM_001235|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK290124|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK297811|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK130870|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK309905|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC070087|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC014623|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##D83174|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AY264853|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC036298|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK122936|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC063860|MAP6|4135|microtubule-associated protein 6##BC041411|MAP6|4135|microtubule-associated protein 6	0.996152	CTCF.p2:12:0.996
chr5	95116866	95116994	reg1000204.p1	18.223	+	TSC_hg19_v1_chr5_+_95067531 CU691986 AB385392	-49394	+	TSC_hg19_v1_chr5_+_95067066 BC047884 NM_014899 BC020231 BC013169 BC041337 AB020685 AK290034	-50062	+	AY027526 AK292338 AK310260 BC047333 AK093225 AX747999 BC032832 NM_031952	-98244	-	AF162769 BT006689 CR450312 CR542165 DQ892497 DQ895709 CU679866 D21238 AF069668 BC106075 X76648 TSC_hg19_v1_chr5_-_95158431 AK311868 BC005304 BC010965	41470	-	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	41590	-	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	180568	-	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3##NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3##BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3##BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3##BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3##AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3##AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3##AY027526|SPATA9|83890|spermatogenesis associated 9##AK292338|SPATA9|83890|spermatogenesis associated 9##AK310260|SPATA9|83890|spermatogenesis associated 9##BC047333|SPATA9|83890|spermatogenesis associated 9##AK093225|SPATA9|83890|spermatogenesis associated 9##BC032832|SPATA9|83890|spermatogenesis associated 9##NM_031952|SPATA9|83890|spermatogenesis associated 9##AF162769|GLRX|2745|glutaredoxin (thioltransferase)##BT006689|GLRX|2745|glutaredoxin (thioltransferase)##CR450312|GLRX|2745|glutaredoxin (thioltransferase)##CR542165|GLRX|2745|glutaredoxin (thioltransferase)##DQ892497|GLRX|2745|glutaredoxin (thioltransferase)##DQ895709|GLRX|2745|glutaredoxin (thioltransferase)##D21238|GLRX|2745|glutaredoxin (thioltransferase)##AF069668|GLRX|2745|glutaredoxin (thioltransferase)##BC106075|GLRX|2745|glutaredoxin (thioltransferase)##X76648|GLRX|2745|glutaredoxin (thioltransferase)##AK311868|GLRX|2745|glutaredoxin (thioltransferase)##BC005304|GLRX|2745|glutaredoxin (thioltransferase)##BC010965|GLRX|2745|glutaredoxin (thioltransferase)##NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2	0.994905	CTCF.p2:-10:0.995
chr20	32900604	32900729	reg1000473.p1	18.219	+	AK097610 NM_001161766	-1059	-	BT006697 CU679982 DQ890569 DQ891701 DQ893730 DQ895397 TSC_hg19_v1_chr20_-_32891162 M61832 M61831 BC010018 BC011606 AK300014 AK316180 AK290422 AK309204 NM_000687	-9522	-	NM_001672 BC104238 BC104239	-52492	+	TSC_hg19_v1_chr20_+_32951078 NM_031483 AK297809 AK304090 AK315212 BC011571 AB056663	50426	+	TSC_hg19_v1_chr20_+_33104226 NM_014183 AF132750 BC002481 AF161511 AK294214 AF165516	203550	+	NM_181509	234025	+	AK097610|AHCY|191|adenosylhomocysteinase##NM_001161766|AHCY|191|adenosylhomocysteinase##BT006697|AHCY|191|adenosylhomocysteinase##DQ890569|AHCY|191|adenosylhomocysteinase##DQ891701|AHCY|191|adenosylhomocysteinase##DQ893730|AHCY|191|adenosylhomocysteinase##DQ895397|AHCY|191|adenosylhomocysteinase##M61832|AHCY|191|adenosylhomocysteinase##M61831|AHCY|191|adenosylhomocysteinase##BC010018|AHCY|191|adenosylhomocysteinase##BC011606|AHCY|191|adenosylhomocysteinase##AK300014|AHCY|191|adenosylhomocysteinase##AK316180|AHCY|191|adenosylhomocysteinase##AK290422|AHCY|191|adenosylhomocysteinase##AK309204|AHCY|191|adenosylhomocysteinase##NM_000687|AHCY|191|adenosylhomocysteinase##NM_001672|ASIP|434|agouti signaling protein##BC104238|ASIP|434|agouti signaling protein##BC104239|ASIP|434|agouti signaling protein##NM_031483|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK297809|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK304090|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK315212|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##BC011571|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AB056663|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##NM_014183|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF132750|DYNLRB1|83658|dynein, light chain, roadblock-type 1##BC002481|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF161511|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AK294214|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF165516|DYNLRB1|83658|dynein, light chain, roadblock-type 1##NM_181509|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha	0.980323	CTCF.p2:-27:0.980
chr12	10292720	10292846	reg1000564.p1	18.218	+	AF400595 AF400596 AF400597 AF400598 AF400599 AF400600 AF400601 AF400602 AY026769 AY026770 AY026771 CU687154 AF313469 BC013385 AY009090 AK297028 BC093829 BC093831 BC071746 AK298679 AK298724 AK313247 CR749536 AK295108 AF313468 AJ312372 AJ312373 AY359002 AK294111 NM_022570 NM_197947 NM_197948 NM_197949 NM_197950 NM_197954	-10010	-	CU691652 DQ892440 DQ895651 AK300979 AK291584 BC039072 AK313589 AK075114 BC067746 AF200949 NM_016511 AK091989 AX747295 AY358587	-41192	-	AY358265 NM_207345 AK307335	-109508	+	AB102861 AB590414 CU692540 DQ891409 DQ894585 AF035776 AK292124 AK295409 AK298040 BC022295 BC055085 AB010710 AK308009 NM_001172632 NM_001172633 NM_002543	31949	-	NM_153022 AY358845 AK055728	38810	+	AF287012 TSC_hg19_v1_chr12_+_10365506 AF087847 AK303581 AK315418 AK074195 BC028315 NM_031412 BC009309 AL136676 BX648781 BC008891	72693	+	AF400595|CLEC7A|64581|C-type lectin domain family 7, member A##AF400596|CLEC7A|64581|C-type lectin domain family 7, member A##AF400597|CLEC7A|64581|C-type lectin domain family 7, member A##AF400598|CLEC7A|64581|C-type lectin domain family 7, member A##AF400599|CLEC7A|64581|C-type lectin domain family 7, member A##AF400600|CLEC7A|64581|C-type lectin domain family 7, member A##AF400601|CLEC7A|64581|C-type lectin domain family 7, member A##AF400602|CLEC7A|64581|C-type lectin domain family 7, member A##AY026769|CLEC7A|64581|C-type lectin domain family 7, member A##AY026770|CLEC7A|64581|C-type lectin domain family 7, member A##AY026771|CLEC7A|64581|C-type lectin domain family 7, member A##AF313469|CLEC7A|64581|C-type lectin domain family 7, member A##BC013385|CLEC7A|64581|C-type lectin domain family 7, member A##AY009090|CLEC7A|64581|C-type lectin domain family 7, member A##AK297028|CLEC7A|64581|C-type lectin domain family 7, member A##BC093829|CLEC7A|64581|C-type lectin domain family 7, member A##BC093831|CLEC7A|64581|C-type lectin domain family 7, member A##BC071746|CLEC7A|64581|C-type lectin domain family 7, member A##AK298679|CLEC7A|64581|C-type lectin domain family 7, member A##AK298724|CLEC7A|64581|C-type lectin domain family 7, member A##AK313247|CLEC7A|64581|C-type lectin domain family 7, member A##CR749536|CLEC7A|64581|C-type lectin domain family 7, member A##AK295108|CLEC7A|64581|C-type lectin domain family 7, member A##AF313468|CLEC7A|64581|C-type lectin domain family 7, member A##AJ312372|CLEC7A|64581|C-type lectin domain family 7, member A##AJ312373|CLEC7A|64581|C-type lectin domain family 7, member A##AY359002|CLEC7A|64581|C-type lectin domain family 7, member A##AK294111|CLEC7A|64581|C-type lectin domain family 7, member A##NM_022570|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197947|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197948|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197949|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197950|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197954|CLEC7A|64581|C-type lectin domain family 7, member A##DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A##DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A##AK300979|CLEC1A|51267|C-type lectin domain family 1, member A##AK291584|CLEC1A|51267|C-type lectin domain family 1, member A##BC039072|CLEC1A|51267|C-type lectin domain family 1, member A##AK313589|CLEC1A|51267|C-type lectin domain family 1, member A##AK075114|CLEC1A|51267|C-type lectin domain family 1, member A##BC067746|CLEC1A|51267|C-type lectin domain family 1, member A##AF200949|CLEC1A|51267|C-type lectin domain family 1, member A##NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A##AK091989|CLEC1A|51267|C-type lectin domain family 1, member A##AY358587|CLEC1A|51267|C-type lectin domain family 1, member A##AY358265|CLEC9A|283420|C-type lectin domain family 9, member A##NM_207345|CLEC9A|283420|C-type lectin domain family 9, member A##AK307335|CLEC9A|283420|C-type lectin domain family 9, member A##AB102861|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##DQ891409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##DQ894585|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AF035776|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK292124|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK295409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK298040|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##BC022295|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##BC055085|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AB010710|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK308009|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_001172632|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_001172633|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_002543|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_153022|C12orf59|120939|chromosome 12 open reading frame 59##AY358845|C12orf59|120939|chromosome 12 open reading frame 59##AK055728|C12orf59|120939|chromosome 12 open reading frame 59##AF287012|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AF087847|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK303581|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK315418|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK074195|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC028315|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##NM_031412|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC009309|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AL136676|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BX648781|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC008891|GABARAPL1|23710|GABA(A) receptor-associated protein like 1	0.515057	CTCF.p2:28:0.515
chr1	41898517	41898630	reg1000374.p2	18.215	+	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-190737	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-190788	-	BC021252 NM_001172221	-269885	-	BC034393 X55177 M65199 NM_001956	51746	-	TSC_hg19_v1_chr1_-_42384357 BC040942	485769	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	485800	-	BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC021252|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172221|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.999587	CTCF.p2:2:1.000
chr6	86192924	86193047	reg1000477.p1	18.215	+	TSC_hg19_v1_chr6_+_86159827 AK314661 AX772810 X55740 BC015940 AK075008 BC065937 DQ186653	-33170	+	NM_001204813 NM_002526 TSC_hg19_v1_chr6_+_86159433	-33613	+	HQ258462 NM_001080508 BC157841 BC132715	-719060	-	BC046520 AY044865 CU686683 TSC_hg19_v1_chr6_-_86303440 BC095419	110408	-	TSC_hg19_v1_chr6_-_86303553 AK000362	110570	-	TSC_hg19_v1_chr6_-_86303574 AK295417 BC005110 BC068589 NM_020468 NM_153816	110647	-	AK314661|NT5E|4907|5'-nucleotidase, ecto (CD73)##X55740|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC015940|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK075008|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC065937|NT5E|4907|5'-nucleotidase, ecto (CD73)##DQ186653|NT5E|4907|5'-nucleotidase, ecto (CD73)##NM_001204813|NT5E|4907|5'-nucleotidase, ecto (CD73)##NM_002526|NT5E|4907|5'-nucleotidase, ecto (CD73)##HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18##BC046520|SNX14|57231|sorting nexin 14##AY044865|SNX14|57231|sorting nexin 14##BC095419|SNX14|57231|sorting nexin 14##AK000362|SNX14|57231|sorting nexin 14##AK295417|SNX14|57231|sorting nexin 14##BC005110|SNX14|57231|sorting nexin 14##BC068589|SNX14|57231|sorting nexin 14##NM_020468|SNX14|57231|sorting nexin 14##NM_153816|SNX14|57231|sorting nexin 14	0.994642	CTCF.p2:6:0.995
chr6	73122024	73122156	reg1000472.p1	18.212	+	NM_001168411 AK300853	-45633	+	AK308658 NM_001168410	-195628	+	AK309185 NM_001168409	-195946	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	209480	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	209799	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	209971	+	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK308658|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001168410|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK309185|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001168409|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5	1.856552	CTCF.p2:14:0.999	CTCF.p2:-45:0.857
chr17	53603901	53604020	reg1000280.p1	18.206	+	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	-104705	-	TSC_hg19_v1_chr17_+_53344967 AK295726 AK074289	-258974	+	AK290043 TSC_hg19_v1_chr17_+_53343204	-260773	+	BC010128 AK001832 NM_018286	196189	-	AK095175 NM_001099640	205502	-	NM_021213 TSC_hg19_v1_chr17_+_53828339 AF087857 AF151638	224415	+	CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##AK295726|HLF|3131|hepatic leukemia factor##AK074289|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100##NM_021213|PCTP|58488|phosphatidylcholine transfer protein##AF087857|PCTP|58488|phosphatidylcholine transfer protein##AF151638|PCTP|58488|phosphatidylcholine transfer protein	0.997318	CTCF.p2:-24:0.997
chr2	27321599	27321726	reg1000640.p1	18.196	+	TSC_hg19_v1_chr2_+_27310090 BX648873 AK130033 AK223075 X78678 AB528158 AM393286 CR456801	-11559	+	NM_000221 NM_006488 TSC_hg19_v1_chr2_+_27309615 BC006233	-12006	+	TSC_hg19_v1_chr2_+_27301693 BC007530 BC017284 BC136279 AF088916 AL050138	-19811	+	AK302185 NM_001166241	12304	-	AK290128 NM_001166239 U66468 TSC_hg19_v1_chr2_-_27341855	20155	-	TSC_hg19_v1_chr2_-_27341997 BC034764 NM_001166240 NM_006569	20304	-	BX648873|KHK|3795|ketohexokinase (fructokinase)##AK130033|KHK|3795|ketohexokinase (fructokinase)##AK223075|KHK|3795|ketohexokinase (fructokinase)##X78678|KHK|3795|ketohexokinase (fructokinase)##AM393286|KHK|3795|ketohexokinase (fructokinase)##CR456801|KHK|3795|ketohexokinase (fructokinase)##NM_000221|KHK|3795|ketohexokinase (fructokinase)##NM_006488|KHK|3795|ketohexokinase (fructokinase)##BC006233|KHK|3795|ketohexokinase (fructokinase)##BC007530|EMILIN1|11117|elastin microfibril interfacer 1##BC017284|EMILIN1|11117|elastin microfibril interfacer 1##BC136279|EMILIN1|11117|elastin microfibril interfacer 1##AF088916|EMILIN1|11117|elastin microfibril interfacer 1##AL050138|EMILIN1|11117|elastin microfibril interfacer 1##AK302185|CGREF1|10669|cell growth regulator with EF-hand domain 1##NM_001166241|CGREF1|10669|cell growth regulator with EF-hand domain 1##AK290128|CGREF1|10669|cell growth regulator with EF-hand domain 1##NM_001166239|CGREF1|10669|cell growth regulator with EF-hand domain 1##U66468|CGREF1|10669|cell growth regulator with EF-hand domain 1##BC034764|CGREF1|10669|cell growth regulator with EF-hand domain 1##NM_001166240|CGREF1|10669|cell growth regulator with EF-hand domain 1##NM_006569|CGREF1|10669|cell growth regulator with EF-hand domain 1	0.521818	CTCF.p2:-4:0.522
chr11	10757419	10757557	reg1000179.p1	18.190	+	TSC_hg19_v1_chr11_-_10715507 NM_001100163 NM_001206880 NM_001206881 NM_130385	-41970	-	TSC_hg19_v1_chr11_-_10715300 AK296336	-42179	-	AF081250 TSC_hg19_v1_chr11_-_10715170 AK304702	-42321	-	TSC_hg19_v1_chr11_+_10772795 BC014335 AK291794 BC020951 BC058914 NM_014633 D63875	15339	+	BC065276 NM_001172705 BX647799 AK123338	72086	-	TSC_hg19_v1_chr11_+_10829631 AK055888	72113	+	NM_001100163|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001206880|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001206881|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_130385|MRVI1|10335|murine retrovirus integration site 1 homolog##AK296336|MRVI1|10335|murine retrovirus integration site 1 homolog##AF081250|MRVI1|10335|murine retrovirus integration site 1 homolog##AK304702|MRVI1|10335|murine retrovirus integration site 1 homolog##BC014335|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK291794|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC058914|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##NM_014633|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##D63875|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC065276|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##NM_001172705|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##BX647799|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK123338|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK055888|LOC144017|144017|uncharacterized LOC144017	1.01533	CTCF.p2:36:0.998
chr19	36422635	36422750	reg1000359.p2	18.179	+	TSC_hg19_v1_chr19_-_36399212 NM_001173514 NM_001173515 NM_003332 NM_198125	-23479	-	TSC_hg19_v1_chr19_-_36399198 AF019562 BC011175 AK290385	-23500	-	TSC_hg19_v1_chr19_-_36399181 BT009851 CR450342 CR542202 AB590208 AY074782 CU679890 DQ891092 DQ894274 AJ010098	-23542	-	BC003578 NM_024509	5329	+	TSC_hg19_v1_chr19_+_36486091 NM_001042631 BC007205 BC064605 BC069054 BC137516 BC137517	63402	+	CU690916 AK093764 AX748293 NM_001039876 BC052573 BC038360	76946	-	NM_001173514|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_001173515|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_003332|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_198125|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AF019562|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BC011175|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AK290385|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BT009851|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR450342|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR542202|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AY074782|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ891092|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ894274|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AJ010098|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BC003578|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_024509|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_001042631|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC007205|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC064605|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC069054|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137516|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137517|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##AK093764|C19orf46|163183|chromosome 19 open reading frame 46##NM_001039876|C19orf46|163183|chromosome 19 open reading frame 46##BC052573|C19orf46|163183|chromosome 19 open reading frame 46##BC038360|C19orf46|163183|chromosome 19 open reading frame 46	0.246733	CTCF.p2:15:0.220
chr20	31109645	31109768	reg1000567.p1	18.175	+	BC038088 TSC_hg19_v1_chr20_-_31071385	-38315	-	AK056286 TSC_hg19_v1_chr20_-_31071290 NM_080616	-38441	-	TSC_hg19_v1_chr20_+_31037448 AL080086	-72204	+	BC023657 BC065483 TSC_hg19_v1_chr20_-_31172902	63217	-	BC105014 BC105042 AK091025 AX746738 NM_182584	129964	-	AY542162 TSC_hg19_v1_chr20_-_31331262 BC000628 AK097059 AK027893	221547	-	BC038088|C20orf112|140688|chromosome 20 open reading frame 112##AK056286|C20orf112|140688|chromosome 20 open reading frame 112##NM_080616|C20orf112|140688|chromosome 20 open reading frame 112##BC023657|LOC284804|284804|uncharacterized LOC284804##BC065483|LOC284804|284804|uncharacterized LOC284804##BC105014|C20orf203|284805|chromosome 20 open reading frame 203##BC105042|C20orf203|284805|chromosome 20 open reading frame 203##AK091025|C20orf203|284805|chromosome 20 open reading frame 203##NM_182584|C20orf203|284805|chromosome 20 open reading frame 203##AY542162|COMMD7|149951|COMM domain containing 7##BC000628|COMMD7|149951|COMM domain containing 7##AK097059|COMMD7|149951|COMM domain containing 7##AK027893|COMMD7|149951|COMM domain containing 7	0.658036	CTCF.p2:-15:0.658
chr12	123237141	123237275	reg1000440.p1	18.174	+	BC095506 AY507143 EU809458 GQ129267 GQ129268 AK313955 BC066881 BC066882 BC066883 BC067484 AF345568 AF385431 AF385432 NM_032554	-22203	-	AK290930 BC038955 AK313212 BC047891 D10923 NM_006018	-35830	-	AK290915 BC056419 AY148884 BC063461 BC027965 NM_177551	-49336	-	TSC_hg19_v1_chr12_+_123237367 AF038554 AK299463 NM_003677 AB014731 BC007860 BC000925	183	+	NM_201435 TSC_hg19_v1_chr12_+_123259079 BC060796 AY254201 AK097663 AK292466	21893	+	TSC_hg19_v1_chr12_+_123319294 AK090537	82094	+	BC095506|HCAR1|27198|hydroxycarboxylic acid receptor 1##AY507143|HCAR1|27198|hydroxycarboxylic acid receptor 1##EU809458|HCAR1|27198|hydroxycarboxylic acid receptor 1##GQ129267|HCAR1|27198|hydroxycarboxylic acid receptor 1##GQ129268|HCAR1|27198|hydroxycarboxylic acid receptor 1##AK313955|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066881|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066882|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066883|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC067484|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF345568|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF385431|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF385432|HCAR1|27198|hydroxycarboxylic acid receptor 1##NM_032554|HCAR1|27198|hydroxycarboxylic acid receptor 1##AK290930|HCAR3|8843|hydroxycarboxylic acid receptor 3##BC038955|HCAR3|8843|hydroxycarboxylic acid receptor 3##AK313212|HCAR3|8843|hydroxycarboxylic acid receptor 3##BC047891|HCAR3|8843|hydroxycarboxylic acid receptor 3##D10923|HCAR3|8843|hydroxycarboxylic acid receptor 3##NM_006018|HCAR3|8843|hydroxycarboxylic acid receptor 3##AK290915|HCAR2|338442|hydroxycarboxylic acid receptor 2##BC056419|HCAR2|338442|hydroxycarboxylic acid receptor 2##AY148884|HCAR2|338442|hydroxycarboxylic acid receptor 2##BC063461|HCAR2|338442|hydroxycarboxylic acid receptor 2##BC027965|HCAR2|338442|hydroxycarboxylic acid receptor 2##NM_177551|HCAR2|338442|hydroxycarboxylic acid receptor 2##AF038554|DENR|8562|density-regulated protein##AK299463|DENR|8562|density-regulated protein##NM_003677|DENR|8562|density-regulated protein##AB014731|DENR|8562|density-regulated protein##BC007860|DENR|8562|density-regulated protein##BC000925|DENR|8562|density-regulated protein##NM_201435|CCDC62|84660|coiled-coil domain containing 62##BC060796|CCDC62|84660|coiled-coil domain containing 62##AY254201|CCDC62|84660|coiled-coil domain containing 62##AK097663|CCDC62|84660|coiled-coil domain containing 62##AK292466|CCDC62|84660|coiled-coil domain containing 62##AK090537|HIP1R|9026|huntingtin interacting protein 1 related	0.221688	
chr17	26207152	26207287	reg1000615.p1	18.160	+	BC130283 BC144126 U05810 L09210 X73029 AF068236 AK304252 NM_000625 TSC_hg19_v1_chr17_-_26127556	-79704	-	U31511 TSC_hg19_v1_chr17_-_26127402	-79821	-	TSC_hg19_v1_chr17_+_25958264 AB003517 AB008492	-248947	+	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	13172	-	TSC_hg19_v1_chr17_+_26369661 AK315315 AF197898 NM_016231 AF180819	162434	+	AB384832 AK024686 TSC_hg19_v1_chr17_+_26370066	162782	+	BC130283|NOS2|4843|nitric oxide synthase 2, inducible##BC144126|NOS2|4843|nitric oxide synthase 2, inducible##U05810|NOS2|4843|nitric oxide synthase 2, inducible##L09210|NOS2|4843|nitric oxide synthase 2, inducible##X73029|NOS2|4843|nitric oxide synthase 2, inducible##AF068236|NOS2|4843|nitric oxide synthase 2, inducible##AK304252|NOS2|4843|nitric oxide synthase 2, inducible##NM_000625|NOS2|4843|nitric oxide synthase 2, inducible##U31511|NOS2|4843|nitric oxide synthase 2, inducible##AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108##AK315315|NLK|51701|nemo-like kinase##AF197898|NLK|51701|nemo-like kinase##NM_016231|NLK|51701|nemo-like kinase##AF180819|NLK|51701|nemo-like kinase##AK024686|NLK|51701|nemo-like kinase	0.960514	CTCF.p2:11:0.961
chr11	61666703	61666835	reg1000594.p1	18.148	+	AB529172 DQ892880 DQ896129 CU678796 TSC_hg19_v1_chr11_-_61659018 AF134404 AK295473 AK310523 AF084560 BC004901 NM_021727	-7815	-	AK074939 BC009011 TSC_hg19_v1_chr11_+_61595772 AF126799 AB529115	-70953	+	TSC_hg19_v1_chr11_+_61595676 AF084559 NM_004265	-71068	+	TSC_hg19_v1_chr11_-_61684983 BC022239 NM_013401	18219	-	BC015220 NM_001139443 NM_004183	50586	+	CU677245 AK293701 TSC_hg19_v1_chr11_+_61722706 AK301392	55893	+	DQ892880|FADS3|3995|fatty acid desaturase 3##DQ896129|FADS3|3995|fatty acid desaturase 3##AF134404|FADS3|3995|fatty acid desaturase 3##AK295473|FADS3|3995|fatty acid desaturase 3##AK310523|FADS3|3995|fatty acid desaturase 3##AF084560|FADS3|3995|fatty acid desaturase 3##BC004901|FADS3|3995|fatty acid desaturase 3##NM_021727|FADS3|3995|fatty acid desaturase 3##AK074939|FADS2|9415|fatty acid desaturase 2##BC009011|FADS2|9415|fatty acid desaturase 2##AF126799|FADS2|9415|fatty acid desaturase 2##AF084559|FADS2|9415|fatty acid desaturase 2##NM_004265|FADS2|9415|fatty acid desaturase 2##BC022239|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##NM_013401|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##BC015220|BEST1|7439|bestrophin 1##NM_001139443|BEST1|7439|bestrophin 1##NM_004183|BEST1|7439|bestrophin 1##AK293701|BEST1|7439|bestrophin 1##AK301392|BEST1|7439|bestrophin 1	1.146058	CTCF.p2:5:1.000
chr11	67150119	67150249	reg1000563.p1	18.146	+	AK298052 NM_001166212	-8537	-	DQ891525 DQ894715 AB528390 AY049779 BC066229 BC066230 BC066231 AF172854 BC012939 AF176911 NM_013246	-9078	-	AF179890 BC001334 TSC_hg19_v1_chr11_-_67121006 BC070250 AB209274 NM_021173	-29180	-	TSC_hg19_v1_chr11_+_67159464 BC014848 NM_004584 U53174 AK315348 CR536508	9284	+	NM_001243224	10591	+	BT006629 AB464100 S57501 TSC_hg19_v1_chr11_-_67169297 AK313586 X70848 M63960 BC004482 BC001888	19090	-	AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ891525|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ894715|CLCF1|23529|cardiotrophin-like cytokine factor 1##AY049779|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066229|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066230|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066231|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF172854|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC012939|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF176911|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_013246|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF179890|POLD4|57804|polymerase (DNA-directed), delta 4##BC001334|POLD4|57804|polymerase (DNA-directed), delta 4##BC070250|POLD4|57804|polymerase (DNA-directed), delta 4##AB209274|POLD4|57804|polymerase (DNA-directed), delta 4##NM_021173|POLD4|57804|polymerase (DNA-directed), delta 4##BC014848|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_004584|RAD9A|5883|RAD9 homolog A (S. pombe)##U53174|RAD9A|5883|RAD9 homolog A (S. pombe)##AK315348|RAD9A|5883|RAD9 homolog A (S. pombe)##CR536508|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_001243224|RAD9A|5883|RAD9 homolog A (S. pombe)##BT006629|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##S57501|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##AK313586|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##X70848|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##M63960|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC004482|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC001888|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme	0.945989	CTCF.p2:19:0.930
chr17	35730604	35730725	reg1000339.p1	18.145	+	TSC_hg19_v1_chr17_-_35716040 AB371587 AK309084 AY315621 AY315622 NM_198836	-14612	-	AY315619 AY315620 NM_198837 NM_198838	-73973	-	AK057229 NM_012138 TSC_hg19_v1_chr17_+_35306253 AF083208 BC000591 AJ249940 AB385572 CU674286 DQ892097 DQ895290	-424365	+	AK096966 BC034672 NM_173625 CU689930	2316	+	AK308905 TSC_hg19_v1_chr17_-_35766928 AY315623 AY315625 AY315626 NM_198834 NM_198839	36211	-	TSC_hg19_v1_chr17_+_35766978 NM_001166105 AK096371 AK225918	36298	+	AB371587|ACACA|31|acetyl-CoA carboxylase alpha##AK309084|ACACA|31|acetyl-CoA carboxylase alpha##AY315621|ACACA|31|acetyl-CoA carboxylase alpha##AY315622|ACACA|31|acetyl-CoA carboxylase alpha##NM_198836|ACACA|31|acetyl-CoA carboxylase alpha##AY315619|ACACA|31|acetyl-CoA carboxylase alpha##AY315620|ACACA|31|acetyl-CoA carboxylase alpha##NM_198837|ACACA|31|acetyl-CoA carboxylase alpha##NM_198838|ACACA|31|acetyl-CoA carboxylase alpha##AK057229|AATF|26574|apoptosis antagonizing transcription factor##NM_012138|AATF|26574|apoptosis antagonizing transcription factor##AF083208|AATF|26574|apoptosis antagonizing transcription factor##BC000591|AATF|26574|apoptosis antagonizing transcription factor##AJ249940|AATF|26574|apoptosis antagonizing transcription factor##DQ892097|AATF|26574|apoptosis antagonizing transcription factor##DQ895290|AATF|26574|apoptosis antagonizing transcription factor##AK096966|C17orf78|284099|chromosome 17 open reading frame 78##BC034672|C17orf78|284099|chromosome 17 open reading frame 78##NM_173625|C17orf78|284099|chromosome 17 open reading frame 78##AK308905|ACACA|31|acetyl-CoA carboxylase alpha##AY315623|ACACA|31|acetyl-CoA carboxylase alpha##AY315625|ACACA|31|acetyl-CoA carboxylase alpha##AY315626|ACACA|31|acetyl-CoA carboxylase alpha##NM_198834|ACACA|31|acetyl-CoA carboxylase alpha##NM_198839|ACACA|31|acetyl-CoA carboxylase alpha##NM_001166105|TADA2A|6871|transcriptional adaptor 2A##AK096371|TADA2A|6871|transcriptional adaptor 2A##AK225918|TADA2A|6871|transcriptional adaptor 2A	0.514183	CTCF.p2:-44:0.501
chr14	95015854	95015989	reg1000711.p1	18.144	+	BC040857 NM_173850	-31741	-	AY358700 AY220120 AY220119 AK301082 BC111498 AY220121 AY220118 AY185496 AY185497 NM_001042518 NM_175739	-73330	-	BC146962 BX248259 NM_001080451	-96818	-	TSC_hg19_v1_chr14_+_95027778 AK309586 AK313196 BC014992 NM_006215 BX248760 BX248009	11879	+	NM_000624 TSC_hg19_v1_chr14_+_95047736 AK310869	31812	+	TSC_hg19_v1_chr14_+_95047766 AK298279	31842	+	BC040857|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12##NM_173850|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12##AY358700|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220120|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220119|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AK301082|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC111498|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220121|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220118|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185496|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185497|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_001042518|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_175739|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC146962|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##BX248259|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##NM_001080451|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##AK309586|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##AK313196|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##BC014992|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##NM_006215|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##BX248760|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##BX248009|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##NM_000624|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##AK310869|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##AK298279|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5	1.026181	CTCF.p2:12:0.998
chr15	101458298	101458417	reg1000524.p2	18.141	+	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-38286	+	TSC_hg19_v1_chr15_+_101420006 NM_000693	-38351	+	TSC_hg19_v1_chr15_+_101390032 AK056534	-68324	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	1117	-	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	1155	+	AB071402 TSC_hg19_v1_chr15_-_101791795	333379	-	AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##NM_000693|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK056534|LOC145757|145757|uncharacterized LOC145757##NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AB071402|CHSY1|22856|chondroitin sulfate synthase 1	0.064828	
chr12	54140548	54140675	reg1000387.p1	18.118	+	AB040969 TSC_hg19_v1_chr12_-_54121231 AF370415 AY563137 BC003177 AY358397 AL136895 AK122773 AK222646 AK092788 AX747731 AK294424 AK296497 AK309199 AK027881 AK315578 NM_001143682 NM_020898	-19357	-	NM_001002031	-70100	-	NM_005176	-70503	-	AF255676 NM_017410 BC090850 AF263466 BC002754 BT009908	192021	+	TSC_hg19_v1_chr12_+_54348683 AB464579 NM_173860	208087	+	NM_014212 AK291946 BC001543 AJ000041 CU674756	226356	+	AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1##BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001002031|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##NM_005176|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##AF255676|HOXC13|3229|homeobox C13##NM_017410|HOXC13|3229|homeobox C13##BC090850|HOXC13|3229|homeobox C13##AF263466|HOXC13|3229|homeobox C13##BC002754|HOXC13|3229|homeobox C13##BT009908|HOXC13|3229|homeobox C13##NM_173860|HOXC12|3228|homeobox C12##NM_014212|HOXC11|3227|homeobox C11##AK291946|HOXC11|3227|homeobox C11##BC001543|HOXC11|3227|homeobox C11##AJ000041|HOXC11|3227|homeobox C11	1.967268	CTCF.p2:22:0.985	CTCF.p2:-52:0.983
chr14	104013216	104013349	reg1000756.p1	18.113	+	TSC_hg19_v1_chr14_+_103995535 BC016033	-17717	+	TSC_hg19_v1_chr14_+_103995518 AK097771 NM_152307 BC010167	-17783	+	TSC_hg19_v1_chr14_-_103995410 BC040666	-17866	-	AK291312 AK225741 TSC_hg19_v1_chr14_-_104028604 BC044216 AF095195 AK225730 BC050551 NM_001015049 NM_004873	15333	-	TSC_hg19_v1_chr14_-_104028984 AB020680 NM_001015048	15779	-	TSC_hg19_v1_chr14_+_104029325 AK299527 NM_032374 AK223092 AK223103 BC007412	16029	+	BC016033|TRMT61A|115708|tRNA methyltransferase 61 homolog A (S. cerevisiae)##AK097771|TRMT61A|115708|tRNA methyltransferase 61 homolog A (S. cerevisiae)##NM_152307|TRMT61A|115708|tRNA methyltransferase 61 homolog A (S. cerevisiae)##BC010167|TRMT61A|115708|tRNA methyltransferase 61 homolog A (S. cerevisiae)##AK291312|BAG5|9529|BCL2-associated athanogene 5##AK225741|BAG5|9529|BCL2-associated athanogene 5##BC044216|BAG5|9529|BCL2-associated athanogene 5##AF095195|BAG5|9529|BCL2-associated athanogene 5##AK225730|BAG5|9529|BCL2-associated athanogene 5##BC050551|BAG5|9529|BCL2-associated athanogene 5##NM_001015049|BAG5|9529|BCL2-associated athanogene 5##NM_004873|BAG5|9529|BCL2-associated athanogene 5##AB020680|BAG5|9529|BCL2-associated athanogene 5##NM_001015048|BAG5|9529|BCL2-associated athanogene 5##NM_032374|APOPT1|84334|apoptogenic 1##AK223092|APOPT1|84334|apoptogenic 1##AK223103|APOPT1|84334|apoptogenic 1##BC007412|APOPT1|84334|apoptogenic 1	0.996291	CTCF.p2:9:0.996
chr10	75608931	75609047	reg1000366.p1	18.106	+	TSC_hg19_v1_chr10_-_75571579 BC018681 AK303648 NM_003635	-37424	-	BC035711 TSC_hg19_v1_chr10_-_75571357 BC052780	-37615	-	BC151206 TSC_hg19_v1_chr10_+_75545421	-63569	+	AB590440 L07044 DQ892365 DQ895574 DQ896692 TSC_hg19_v1_chr10_-_75634275 U66064 AK131199 AK095576 BC034044 AK225771 AK291704 AK301180 NM_001204492 NM_001222 NM_172169 NM_172170 NM_172171 NM_172173	25330	-	NM_001145031 NM_002658 TSC_hg19_v1_chr10_+_75670889 AK297940 AK298560 AK312960	61888	+	BC013575 K03226 M15476 D00244 TSC_hg19_v1_chr10_+_75670948 X02760	61952	+	BC018681|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##AK303648|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##NM_003635|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##BC035711|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##BC151206|KIAA0913|23053|KIAA0913##L07044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ892365|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ895574|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ896692|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##U66064|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK131199|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK095576|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##BC034044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK225771|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK291704|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK301180|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001204492|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001222|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172169|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172170|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172171|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172173|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001145031|PLAU|5328|plasminogen activator, urokinase##NM_002658|PLAU|5328|plasminogen activator, urokinase##AK297940|PLAU|5328|plasminogen activator, urokinase##AK298560|PLAU|5328|plasminogen activator, urokinase##AK312960|PLAU|5328|plasminogen activator, urokinase##BC013575|PLAU|5328|plasminogen activator, urokinase##K03226|PLAU|5328|plasminogen activator, urokinase##M15476|PLAU|5328|plasminogen activator, urokinase##D00244|PLAU|5328|plasminogen activator, urokinase##X02760|PLAU|5328|plasminogen activator, urokinase	0.968381	CTCF.p2:-22:0.968
chr17	41654135	41654267	reg1000658.p1	18.096	+	TSC_hg19_v1_chr17_-_41623674 AK315961 U18018 NM_001079675	-30475	-	BC016623 AK290429 AK299019 AK312934 NM_001986	-30926	-	D12765 TSC_hg19_v1_chr17_-_41622738 DQ396626	-31461	-	AB527749 CU686836 EU446636 BC069474 BC069506 NM_004527 NM_013999 U10492 U10493	84714	-	NM_001040002 AK291139	85074	-	BC101086 BC101087 BC101088 BC101089 AF331844 AF326739 NM_025237	181942	-	AK315961|ETV4|2118|ets variant 4##U18018|ETV4|2118|ets variant 4##NM_001079675|ETV4|2118|ets variant 4##BC016623|ETV4|2118|ets variant 4##AK290429|ETV4|2118|ets variant 4##AK299019|ETV4|2118|ets variant 4##AK312934|ETV4|2118|ets variant 4##NM_001986|ETV4|2118|ets variant 4##D12765|ETV4|2118|ets variant 4##DQ396626|ETV4|2118|ets variant 4##EU446636|MEOX1|4222|mesenchyme homeobox 1##BC069474|MEOX1|4222|mesenchyme homeobox 1##BC069506|MEOX1|4222|mesenchyme homeobox 1##NM_004527|MEOX1|4222|mesenchyme homeobox 1##NM_013999|MEOX1|4222|mesenchyme homeobox 1##U10492|MEOX1|4222|mesenchyme homeobox 1##U10493|MEOX1|4222|mesenchyme homeobox 1##NM_001040002|MEOX1|4222|mesenchyme homeobox 1##AK291139|MEOX1|4222|mesenchyme homeobox 1##BC101086|SOST|50964|sclerostin##BC101087|SOST|50964|sclerostin##BC101088|SOST|50964|sclerostin##BC101089|SOST|50964|sclerostin##AF331844|SOST|50964|sclerostin##AF326739|SOST|50964|sclerostin##NM_025237|SOST|50964|sclerostin	0.998933	CTCF.p2:-14:0.999
chr1	156195333	156195464	reg1000599.p1	18.084	+	TSC_hg19_v1_chr1_+_156182797 NM_001199653 NM_001199654 NM_001199661 NM_001199662 NM_001199663 NM_001199664 NM_007221 AK124646 AK307287 AK022523 AK289490 AK290260 AK310694 BC033656 BC065031 AB464036 CU688008 DQ890582 DQ893741 EU832507 EU832588 AL080101 BC056417 AF141310 BC050735	-12604	+	TSC_hg19_v1_chr1_+_156163911 AB007915 BC039854	-31480	+	TSC_hg19_v1_chr1_+_156163907 AK074912 AK299747 AK307968 AK309678 AK309690 BC008843 AK075002 AK294524 AK293778	-31506	+	BC113432 BC113434 NM_199173 X51699 X53698 HQ258037	16586	+	AK294143 BC058509 NM_198406 AF455047 AF455045 AY424284 TSC_hg19_v1_chr1_-_156217848 AK095197 NM_024897 AK095143 AF455046 AK054682 AK094346 AK316034 AK295915 AK295916	22392	-	AY336728 AB384108 AY168922 AB085691 TSC_hg19_v1_chr1_-_156252597 AK092183 AX747396	57137	-	NM_001199653|PMF1|11243|polyamine-modulated factor 1##NM_001199654|PMF1|11243|polyamine-modulated factor 1##NM_001199661|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##NM_001199662|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##NM_001199663|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##NM_001199664|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##NM_007221|PMF1|11243|polyamine-modulated factor 1##AK124646|PMF1|11243|polyamine-modulated factor 1##AK307287|PMF1|11243|polyamine-modulated factor 1##AK022523|PMF1|11243|polyamine-modulated factor 1##AK289490|PMF1|11243|polyamine-modulated factor 1##AK290260|PMF1|11243|polyamine-modulated factor 1##AK310694|PMF1|11243|polyamine-modulated factor 1##BC033656|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##BC065031|PMF1|11243|polyamine-modulated factor 1##DQ890582|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##DQ893741|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##EU832507|PMF1|11243|polyamine-modulated factor 1##EU832588|PMF1|11243|polyamine-modulated factor 1##AL080101|PMF1|11243|polyamine-modulated factor 1##BC056417|PMF1|11243|polyamine-modulated factor 1##AF141310|PMF1|11243|polyamine-modulated factor 1##BC050735|PMF1|11243|polyamine-modulated factor 1##AB007915|SLC25A44|9673|solute carrier family 25, member 44##BC039854|SLC25A44|9673|solute carrier family 25, member 44##AK074912|SLC25A44|9673|solute carrier family 25, member 44##AK299747|SLC25A44|9673|solute carrier family 25, member 44##AK307968|SLC25A44|9673|solute carrier family 25, member 44##AK309678|SLC25A44|9673|solute carrier family 25, member 44##AK309690|SLC25A44|9673|solute carrier family 25, member 44##BC008843|SLC25A44|9673|solute carrier family 25, member 44##AK075002|SLC25A44|9673|solute carrier family 25, member 44##AK294524|SLC25A44|9673|solute carrier family 25, member 44##BC113432|BGLAP|632|bone gamma-carboxyglutamate (gla) protein##BC113434|BGLAP|632|bone gamma-carboxyglutamate (gla) protein##NM_199173|BGLAP|632|bone gamma-carboxyglutamate (gla) protein##X51699|BGLAP|632|bone gamma-carboxyglutamate (gla) protein##X53698|BGLAP|632|bone gamma-carboxyglutamate (gla) protein##HQ258037|BGLAP|632|bone gamma-carboxyglutamate (gla) protein##AK294143|PAQR6|79957|progestin and adipoQ receptor family member VI##BC058509|PAQR6|79957|progestin and adipoQ receptor family member VI##NM_198406|PAQR6|79957|progestin and adipoQ receptor family member VI##AF455047|PAQR6|79957|progestin and adipoQ receptor family member VI##AF455045|PAQR6|79957|progestin and adipoQ receptor family member VI##AY424284|PAQR6|79957|progestin and adipoQ receptor family member VI##AK095197|PAQR6|79957|progestin and adipoQ receptor family member VI##NM_024897|PAQR6|79957|progestin and adipoQ receptor family member VI##AK095143|PAQR6|79957|progestin and adipoQ receptor family member VI##AF455046|PAQR6|79957|progestin and adipoQ receptor family member VI##AK054682|PAQR6|79957|progestin and adipoQ receptor family member VI##AK094346|PAQR6|79957|progestin and adipoQ receptor family member VI##AK316034|PAQR6|79957|progestin and adipoQ receptor family member VI##AK295915|PAQR6|79957|progestin and adipoQ receptor family member VI##AK295916|PAQR6|79957|progestin and adipoQ receptor family member VI##AY336728|SMG5|23381|smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY168922|SMG5|23381|smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)##AB085691|SMG5|23381|smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK092183|SMG5|23381|smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.998198	CTCF.p2:-2:0.998
chr13	49875425	49875544	reg1000301.p1	18.079	+	NM_001193478 NM_030911 TSC_hg19_v1_chr13_+_49822076 BC022801 BC092434 AK312835 BC032889 BC070238 AK297400 BC009562 AY027525 BC048092 BC125202 BC125203	-53395	+	AB463896 AY603964 NM_001507	-81012	+	TSC_hg19_v1_chr13_+_49684452 AK302415 AJ749707 NM_014923 AB023187 BC107793	-191028	+	NM_030925	100250	-	TSC_hg19_v1_chr13_-_50018201 AY211923 AY288977 BX647518 NM_001079670	142697	-	TSC_hg19_v1_chr13_+_50018457 NM_031915 AK308220 AF334407	142986	+	NM_001193478|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##NM_030911|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC022801|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC092434|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AK312835|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC032889|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC070238|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AK297400|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC009562|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AY027525|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC048092|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC125202|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC125203|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AY603964|MLNR|2862|motilin receptor##NM_001507|MLNR|2862|motilin receptor##AK302415|FNDC3A|22862|fibronectin type III domain containing 3A##AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A##NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A##AB023187|FNDC3A|22862|fibronectin type III domain containing 3A##BC107793|FNDC3A|22862|fibronectin type III domain containing 3A##NM_030925|CAB39L|81617|calcium binding protein 39-like##AY211923|CAB39L|81617|calcium binding protein 39-like##AY288977|CAB39L|81617|calcium binding protein 39-like##BX647518|CAB39L|81617|calcium binding protein 39-like##NM_001079670|CAB39L|81617|calcium binding protein 39-like##NM_031915|SETDB2|83852|SET domain, bifurcated 2##AK308220|SETDB2|83852|SET domain, bifurcated 2##AF334407|SETDB2|83852|SET domain, bifurcated 2	0.988929	CTCF.p2:-12:0.989
chr20	47274396	47274521	reg1000486.p1	18.079	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-859140	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-859706	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1143774	+	AB037836 TSC_hg19_v1_chr20_-_47444291	169828	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	169981	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	263860	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.999724	CTCF.p2:-22:1.000
chr3	9344373	9344499	reg1000545.p1	18.076	+	TSC_hg19_v1_chr3_-_9291320 NM_001033117 NM_014850 BC140004 AK054831	-53118	-	AB007871 AB384477 AK094355 AF427144 TSC_hg19_v1_chr3_-_9290871 AF464189	-53692	-	AB528316 DQ891197 DQ894380 TSC_hg19_v1_chr3_-_9005128 AY004333 BC001302 AK222771 AF169796 AK023075 NM_020165	-339306	-	TSC_hg19_v1_chr3_+_9404750 NM_001114092 NM_015453 AK023263 BC001622 AK001680 BC010421	60339	+	TSC_hg19_v1_chr3_-_9438337 BC036698 BC052961	93902	-	AK093640 TSC_hg19_v1_chr3_-_9439124 AL110136	94711	-	NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AB007871|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK094355|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF427144|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF464189|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##DQ891197|RAD18|56852|RAD18 homolog (S. cerevisiae)##DQ894380|RAD18|56852|RAD18 homolog (S. cerevisiae)##AY004333|RAD18|56852|RAD18 homolog (S. cerevisiae)##BC001302|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK222771|RAD18|56852|RAD18 homolog (S. cerevisiae)##AF169796|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK023075|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_020165|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_001114092|THUMPD3|25917|THUMP domain containing 3##NM_015453|THUMPD3|25917|THUMP domain containing 3##AK023263|THUMPD3|25917|THUMP domain containing 3##BC001622|THUMPD3|25917|THUMP domain containing 3##AK001680|THUMPD3|25917|THUMP domain containing 3##BC010421|THUMPD3|25917|THUMP domain containing 3##BC036698|LOC440944|440944|uncharacterized LOC440944##BC052961|LOC440944|440944|uncharacterized LOC440944##AK093640|LOC440944|440944|uncharacterized LOC440944##AL110136|LOC440944|440944|uncharacterized LOC440944	0.5781	CTCF.p2:12:0.578
chr20	46012868	46013019	reg1000574.p1	18.075	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-27455	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-36296	-	TSC_hg19_v1_chr20_-_45927496 BC030721	-85374	-	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	117679	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	117741	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	401809	-	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2	1.122443	CTCF.p2:20:1.000
chr22	23298205	23298331	reg1000648.p3	18.074	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	-68185	+	TSC_hg19_v1_chr22_+_23222900 AK127411 S77601 X57802 X57803 X57816 X57818 AB369252 AF026919 AF026925 AY190825 L26400 AF490955 AF490961	-75339	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	-84575	+	TSC_hg19_v1_chr22_+_23412527 BC037333 BC026342 NM_002073	114248	+	AK312519 TSC_hg19_v1_chr22_+_23412728 AK293653	114461	+	BC008986 AF133587 NM_014433 AK299530 AK310327	185975	-	AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AB369252|CYAT1|100290481|immunoglobulin lambda light chain-like##BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3##BC037333|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC026342|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##NM_002073|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK312519|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK293653|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1##AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1##NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1	0.993064	CTCF.p2:9:0.993
chr17	74864374	74864456	reg1000597.p1	18.072	+	TSC_hg19_v1_chr17_+_74734111 AK308058 AF015184 AK000233	-130262	+	AF015183 NM_001242532 NM_001242533 NM_001242535 NM_001242536 NM_001242537 NM_024311	-130890	+	TSC_hg19_v1_chr17_-_74733465 AK124792 NM_001195427 NM_003016	-130959	-	TSC_hg19_v1_chr17_+_74864556 AK057861 AB235153 BC041577 NM_001199172 NM_144677 BC062354	251	+	AB114297 NM_198955 BC144361	4345	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	220382	+	AK308058|MFSD11|79157|major facilitator superfamily domain containing 11##AF015184|MFSD11|79157|major facilitator superfamily domain containing 11##AK000233|MFSD11|79157|major facilitator superfamily domain containing 11##AF015183|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242532|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242533|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242535|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242536|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242537|MFSD11|79157|major facilitator superfamily domain containing 11##NM_024311|MFSD11|79157|major facilitator superfamily domain containing 11##AK124792|SRSF2|6427|serine/arginine-rich splicing factor 2##NM_001195427|SRSF2|6427|serine/arginine-rich splicing factor 2##NM_003016|SRSF2|6427|serine/arginine-rich splicing factor 2##AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338	0.996186	CTCF.p2:15:0.996
chr15	90614586	90614726	reg1000370.p1	18.069	+	TSC_hg19_v1_chr15_+_90544707 BC020301 AK094712 NM_198526	-69967	+	AK093274 AX748027 CU691000 TSC_hg19_v1_chr15_-_90456145 AK000495 BC053602 NM_001199058 NM_182616	-158551	-	NM_005829	-177040	-	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	31006	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	31049	-	TSC_hg19_v1_chr15_-_90645713 AK312627	31071	-	BC020301|ZNF710|374655|zinc finger protein 710##AK094712|ZNF710|374655|zinc finger protein 710##NM_198526|ZNF710|374655|zinc finger protein 710##AK093274|C15orf38|348110|chromosome 15 open reading frame 38##AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##BC053602|C15orf38|348110|chromosome 15 open reading frame 38##NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##NM_182616|C15orf38|348110|chromosome 15 open reading frame 38##NM_005829|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial	0.983378	CTCF.p2:5:0.983
chr1	34925965	34926098	reg1000685.p1	18.067	+	NM_001134734	-283479	+	AK123355 NM_032884 BC007637	-293432	+	AY210418 NM_052896	-294589	-	AK129509 BC004379 NM_005268	294652	+	AK057628 NM_153212	299310	+	AK026139 NM_024009 TSC_hg19_v1_chr1_+_35246807	320775	+	NM_001134734|C1orf94|84970|chromosome 1 open reading frame 94##AK123355|C1orf94|84970|chromosome 1 open reading frame 94##NM_032884|C1orf94|84970|chromosome 1 open reading frame 94##BC007637|C1orf94|84970|chromosome 1 open reading frame 94##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2##AK129509|GJB5|2709|gap junction protein, beta 5, 31.1kDa##BC004379|GJB5|2709|gap junction protein, beta 5, 31.1kDa##NM_005268|GJB5|2709|gap junction protein, beta 5, 31.1kDa##AK057628|GJB4|127534|gap junction protein, beta 4, 30.3kDa##NM_153212|GJB4|127534|gap junction protein, beta 4, 30.3kDa##AK026139|GJB3|2707|gap junction protein, beta 3, 31kDa##NM_024009|GJB3|2707|gap junction protein, beta 3, 31kDa	0.9976	CTCF.p2:-6:0.998
chr11	110072179	110072317	reg1000634.p1	18.066	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	-108118	+	AK095101 TSC_hg19_v1_chr11_+_109963524	-108720	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-779349	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	95065	-	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	228468	+	AY496266 TSC_hg19_v1_chr11_-_110582834	510555	-	NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20	0.999739	CTCF.p2:-6:1.000
chr1	178971919	178972060	reg1000522.p1	18.057	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	-131843	-	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	-277616	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-489723	+	TSC_hg19_v1_chr1_+_178995028 AB007944	23031	+	TSC_hg19_v1_chr1_+_178995055 AB480690 BC051794 NM_014864	23075	+	AK289989 BC046441 TSC_hg19_v1_chr1_+_178995259	23229	+	AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AB007944|FAM20B|9917|family with sequence similarity 20, member B##AB480690|FAM20B|9917|family with sequence similarity 20, member B##BC051794|FAM20B|9917|family with sequence similarity 20, member B##NM_014864|FAM20B|9917|family with sequence similarity 20, member B##AK289989|FAM20B|9917|family with sequence similarity 20, member B##BC046441|FAM20B|9917|family with sequence similarity 20, member B	0.064265	
chr1	206234508	206234645	reg1000702.p1	18.057	+	NM_000707 AF030512 AF101726 L37112 AB528977 EU432111	-10215	+	BC035696 NM_001123168 BC137545 BC137546	-95660	+	TSC_hg19_v1_chr1_-_206137445 AK124556	-97128	-	AK122631 NM_001007544	54070	-	NM_001910 NM_148964 AJ250716 AJ250717 BC042537 TSC_hg19_v1_chr1_+_206317529 J05036 AK292057 CU692090 AK298069	82955	+	NM_001193321 NM_001193322 NM_014002	409009	+	NM_000707|AVPR1B|553|arginine vasopressin receptor 1B##AF030512|AVPR1B|553|arginine vasopressin receptor 1B##AF101726|AVPR1B|553|arginine vasopressin receptor 1B##L37112|AVPR1B|553|arginine vasopressin receptor 1B##EU432111|AVPR1B|553|arginine vasopressin receptor 1B##BC035696|FAM72A|729533|family with sequence similarity 72, member A##NM_001123168|FAM72A|729533|family with sequence similarity 72, member A##BC137545|FAM72A|729533|family with sequence similarity 72, member A##BC137546|FAM72B|653820|family with sequence similarity 72, member B##AK124556|LOC100132966|100132966|uncharacterized LOC100132966##AK122631|C1orf186|440712|chromosome 1 open reading frame 186##NM_001007544|C1orf186|440712|chromosome 1 open reading frame 186##NM_001910|CTSE|1510|cathepsin E##NM_148964|CTSE|1510|cathepsin E##AJ250716|CTSE|1510|cathepsin E##AJ250717|CTSE|1510|cathepsin E##BC042537|CTSE|1510|cathepsin E##J05036|CTSE|1510|cathepsin E##AK292057|CTSE|1510|cathepsin E##AK298069|CTSE|1510|cathepsin E##NM_001193321|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_001193322|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_014002|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	0.997339	CTCF.p2:-13:0.997
chr11	67273700	67273815	reg1000241.p2	18.056	+	TSC_hg19_v1_chr11_-_67272835 AF334584 BC022230 NM_001130848 NM_004910	-924	-	X98654 TSC_hg19_v1_chr11_-_67271900	-1883	-	TSC_hg19_v1_chr11_+_67250595 BC104797 BC104827 U31913 AB529203 EU446613	-23145	+	TSC_hg19_v1_chr11_-_67275634 BT006909 CR457050 CR542042 AK310197 AK001498 BC016704 AF089814	1876	-	BC002850 NM_005851 AK308725 TSC_hg19_v1_chr11_-_67276169	2382	-	AB528802 AF169154 BC018476 NM_016366	17091	-	AF334584|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##BC022230|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##NM_001130848|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##NM_004910|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##X98654|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##BC104797|AIP|9049|aryl hydrocarbon receptor interacting protein##BC104827|AIP|9049|aryl hydrocarbon receptor interacting protein##U31913|AIP|9049|aryl hydrocarbon receptor interacting protein##EU446613|AIP|9049|aryl hydrocarbon receptor interacting protein##BT006909|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR457050|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR542042|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK310197|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK001498|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BC016704|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AF089814|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BC002850|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##NM_005851|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AF169154|CABP2|51475|calcium binding protein 2##BC018476|CABP2|51475|calcium binding protein 2##NM_016366|CABP2|51475|calcium binding protein 2	0.999626	CTCF.p2:7:1.000
chr22	36520135	36520272	reg1000568.p1	18.055	+	AY072786 DQ778625 TSC_hg19_v1_chr22_-_36424553 AK055213 NM_001082578 NM_001082579	-95664	-	TSC_hg19_v1_chr22_-_36236476 AF229058 AL009266 AK314632 BC013115 BC025281 AK291460 NM_001031695 NM_001082576 NM_001082577 NM_014309	-283678	-	CR456559 TSC_hg19_v1_chr22_-_36236341	-283863	-	BC042918 BC038352 AK025349 AF070675 BC070144 AF305227 BC050596 AY014902 AY014903 AY014904 AY014905 NM_145640	36675	-	AY014906 AY014907 NM_145641 NM_145642	42021	-	AK290466 BC006276 AK313637 AK311506 AY014914 AY014915 NM_030643 NM_145660	80615	-	AY072786|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ778625|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK055213|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082578|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082579|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC042918|APOL3|80833|apolipoprotein L, 3##BC038352|APOL3|80833|apolipoprotein L, 3##AK025349|APOL3|80833|apolipoprotein L, 3##AF070675|APOL3|80833|apolipoprotein L, 3##AF305227|APOL3|80833|apolipoprotein L, 3##BC050596|APOL3|80833|apolipoprotein L, 3##AY014902|APOL3|80833|apolipoprotein L, 3##AY014903|APOL3|80833|apolipoprotein L, 3##AY014904|APOL3|80833|apolipoprotein L, 3##AY014905|APOL3|80833|apolipoprotein L, 3##NM_145640|APOL3|80833|apolipoprotein L, 3##AY014906|APOL3|80833|apolipoprotein L, 3##AY014907|APOL3|80833|apolipoprotein L, 3##NM_145641|APOL3|80833|apolipoprotein L, 3##NM_145642|APOL3|80833|apolipoprotein L, 3##AK290466|APOL4|80832|apolipoprotein L, 4##BC006276|APOL4|80832|apolipoprotein L, 4##AK313637|APOL4|80832|apolipoprotein L, 4##AK311506|APOL4|80832|apolipoprotein L, 4##AY014914|APOL4|80832|apolipoprotein L, 4##AY014915|APOL4|80832|apolipoprotein L, 4##NM_030643|APOL4|80832|apolipoprotein L, 4##NM_145660|APOL4|80832|apolipoprotein L, 4	0.959207	CTCF.p2:16:0.959
chr13	73414129	73414265	reg1000873.p1	18.054	+	TSC_hg19_v1_chr13_+_73356270 NM_006346 AK309828 BC006009 BC008432 BC041806 BC051911 AY370776 AY375528	-57887	+	BC056143 TSC_hg19_v1_chr13_-_73356083 AK314715 BC038101 NM_001128226 NM_014953	-57991	-	AL832266 TSC_hg19_v1_chr13_-_73356067 AB023225 BC012468	-58135	-	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	219007	+	AF161471 AF113122 NM_007249	1293792	-	TSC_hg19_v1_chr13_-_74708425 AK291397	1294199	-	NM_006346|PIBF1|10464|progesterone immunomodulatory binding factor 1##AK309828|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC006009|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC008432|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC041806|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC051911|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY370776|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY375528|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC056143|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AK314715|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##BC038101|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_001128226|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_014953|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AL832266|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AB023225|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##BC012468|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK291397|KLF12|11278|Kruppel-like factor 12	0.998819	CTCF.p2:-23:0.999
chr17	43354710	43354815	reg1000395.p1	18.053	+	BC028124 AF433663 AK302184 AK058143 NM_152343	-15307	-	TSC_hg19_v1_chr17_+_43325300 AK311429	-29458	+	AK096807 TSC_hg19_v1_chr17_-_43319268	-35566	-	TSC_hg19_v1_chr17_-_43394387 BC035576 BC022296 AK290203 AK313085 NM_003954	39613	-	TSC_hg19_v1_chr17_-_43487753 AK092891 AX747793 AK300880	132988	-	TSC_hg19_v1_chr17_-_43503000 AK125535 NM_199282	148239	-	BC028124|C17orf46|124783|chromosome 17 open reading frame 46##AF433663|C17orf46|124783|chromosome 17 open reading frame 46##AK302184|C17orf46|124783|chromosome 17 open reading frame 46##AK058143|C17orf46|124783|chromosome 17 open reading frame 46##NM_152343|C17orf46|124783|chromosome 17 open reading frame 46##AK311429|LOC100133991|100133991|uncharacterized LOC100133991##BC035576|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC022296|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK290203|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK313085|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##NM_003954|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK092891|ARHGAP27|201176|Rho GTPase activating protein 27##AK300880|ARHGAP27|201176|Rho GTPase activating protein 27##AK125535|ARHGAP27|201176|Rho GTPase activating protein 27##NM_199282|ARHGAP27|201176|Rho GTPase activating protein 27	0.664826	CTCF.p2:-19:0.665
chr1	244436438	244436571	reg1000651.p1	18.052	+	TSC_hg19_v1_chr1_+_244217286 AK310634	-219209	+	BC078175 AJ001388 NM_006352	-219961	+	TSC_hg19_v1_chr1_+_244214584 AK291408 AK293892 BC036677	-221921	+	BC054479 NM_001012970	79432	+	CU680302 EU831433 EU831525 TSC_hg19_v1_chr1_-_244615212 AK025514 AK303886 BC012356	178672	-	TSC_hg19_v1_chr1_-_244615392 AK308749 NM_001126	178834	-	BC078175|ZNF238|10472|zinc finger protein 238##AJ001388|ZNF238|10472|zinc finger protein 238##NM_006352|ZNF238|10472|zinc finger protein 238##AK291408|ZNF238|10472|zinc finger protein 238##AK293892|ZNF238|10472|zinc finger protein 238##BC036677|ZNF238|10472|zinc finger protein 238##BC054479|C1orf100|200159|chromosome 1 open reading frame 100##NM_001012970|C1orf100|200159|chromosome 1 open reading frame 100##EU831433|ADSS|159|adenylosuccinate synthase##EU831525|ADSS|159|adenylosuccinate synthase##AK025514|ADSS|159|adenylosuccinate synthase##AK303886|ADSS|159|adenylosuccinate synthase##BC012356|ADSS|159|adenylosuccinate synthase##AK308749|ADSS|159|adenylosuccinate synthase##NM_001126|ADSS|159|adenylosuccinate synthase	1.880814	CTCF.p2:12:0.998	CTCF.p2:-41:0.883
chr19	982803	982943	reg1000714.p1	18.050	+	TSC_hg19_v1_chr19_+_926038 AY845638 BC060828 NM_005224	-56862	+	TSC_hg19_v1_chr19_+_917306 BC141812 NM_032551 AY253982 BC140825 AB051065 AF343725 AJ309020 AY029541 AY253981 BC111094 EU883577	-65480	+	NM_138774 TSC_hg19_v1_chr19_-_913224	-69649	-	TSC_hg19_v1_chr19_+_984344 NM_024100 BC000040 BC001648 CU674808	1461	+	TSC_hg19_v1_chr19_+_1000312 AY507106 AY507107 NM_138690	17492	+	DQ893224 DQ896554 CU679197 TSC_hg19_v1_chr19_-_1021121 BC008957 DQ005958	38185	-	AY845638|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC060828|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_005224|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC141812|KISS1R|84634|KISS1 receptor##NM_032551|KISS1R|84634|KISS1 receptor##AY253982|KISS1R|84634|KISS1 receptor##BC140825|KISS1R|84634|KISS1 receptor##AB051065|KISS1R|84634|KISS1 receptor##AF343725|KISS1R|84634|KISS1 receptor##AJ309020|KISS1R|84634|KISS1 receptor##AY029541|KISS1R|84634|KISS1 receptor##AY253981|KISS1R|84634|KISS1 receptor##EU883577|KISS1R|84634|KISS1 receptor##NM_138774|R3HDM4|91300|R3H domain containing 4##NM_024100|WDR18|57418|WD repeat domain 18##BC000040|WDR18|57418|WD repeat domain 18##BC001648|WDR18|57418|WD repeat domain 18##AY507106|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##AY507107|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_138690|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##DQ893224|C19orf6|91304|chromosome 19 open reading frame 6##DQ896554|C19orf6|91304|chromosome 19 open reading frame 6##BC008957|C19orf6|91304|chromosome 19 open reading frame 6##DQ005958|C19orf6|91304|chromosome 19 open reading frame 6	1.108408	CTCF.p2:11:0.991
chr3	156799615	156799754	reg1000649.p1	18.046	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-255573	+	BC034397 NM_001184718	-405232	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-406269	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	78225	-	NM_020307 AK122738	78830	-	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	354966	+	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long	0.998386	CTCF.p2:4:0.998
chr15	78488098	78488231	reg1000583.p1	18.033	+	TSC_hg19_v1_chr15_+_78441739 U07681 AB529210 CU692430 DQ892774 DQ893529 DQ896022	-46410	+	TSC_hg19_v1_chr15_+_78441734 AK222973	-46430	+	TSC_hg19_v1_chr15_+_78441718 AK299970 AK096721 AK296002 BC036227 NM_005530 AK315963 CR749548 BC021967 AK316051	-46459	+	DQ896428 EU176436 CU679287 BC009289 AB014531 AK294202 AK295269 AF179481 AK054882 AK299597 AK314508 NM_001199377 NM_015162	38780	-	TSC_hg19_v1_chr15_+_78556511 BC021720 NM_018602 AK098079 BX648710	68380	+	TSC_hg19_v1_chr15_+_78556901 AK096616 NM_001130182	68780	+	U07681|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ892774|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ893529|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ896022|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK222973|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK299970|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK296002|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC036227|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##NM_005530|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK315963|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##CR749548|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC021967|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK316051|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ896428|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##EU176436|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##BC009289|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK294202|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK295269|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AF179481|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK054882|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK299597|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK314508|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##NM_001199377|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##NM_015162|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##BC021720|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_018602|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##AK098079|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##BX648710|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##AK096616|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_001130182|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4	0.999122	CTCF.p2:13:0.999
chr8	80596966	80597097	reg1000625.p1	18.032	+	AK292737 TSC_hg19_v1_chr8_+_80523376 BC006302 S82024 AB528346 BT020034 CR456833 DQ892719 DQ895968 CU675343	-73628	+	TSC_hg19_v1_chr8_+_80523354 AK297594 AK308557 AK297485	-73672	+	AK299500 TSC_hg19_v1_chr8_+_80523339	-73692	+	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	82966	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	345471	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	395998	-	AK292737|STMN2|11075|stathmin-like 2##BC006302|STMN2|11075|stathmin-like 2##S82024|STMN2|11075|stathmin-like 2##BT020034|STMN2|11075|stathmin-like 2##CR456833|STMN2|11075|stathmin-like 2##DQ892719|STMN2|11075|stathmin-like 2##DQ895968|STMN2|11075|stathmin-like 2##AK297594|STMN2|11075|stathmin-like 2##AK308557|STMN2|11075|stathmin-like 2##AK297485|STMN2|11075|stathmin-like 2##AK299500|STMN2|11075|stathmin-like 2##AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52	0.999729	CTCF.p2:-14:1.000
chr16	28956977	28957110	reg1000656.p1	18.030	+	NM_001178098 NM_001770 BC006338 AK301363 AK313577 BC052294 M21097 X13312 AK307295 M28170 DQ893016 DQ896261 AK130657 AK301167 AK304456	-13741	+	AY129017 TSC_hg19_v1_chr16_-_28936536 AK295229 BC046118 AK026935 NM_024816 BC058900	-20535	-	TSC_hg19_v1_chr16_+_28891234 AK128456	-65740	+	BC068007 BC101741 BC112182 TSC_hg19_v1_chr16_+_28962327 AF458593 NM_032815 AK074761 AK304172	5195	+	TSC_hg19_v1_chr16_+_28986106 BC038961 NM_001142448 NM_001142449 NM_001142450 NM_001142451 NM_032038 AK095677 AK289787 BC065235 AF370423 BC047741 AB209402 AL390215 AF212371 BC008325 AM392778 AM393748 AB528362 CU678917 BC006156	29211	+	BC011563 NM_001014989	39103	+	NM_001178098|CD19|930|CD19 molecule##NM_001770|CD19|930|CD19 molecule##BC006338|CD19|930|CD19 molecule##AK301363|CD19|930|CD19 molecule##AK313577|CD19|930|CD19 molecule##BC052294|CD19|930|CD19 molecule##M21097|CD19|930|CD19 molecule##X13312|CD19|930|CD19 molecule##AK307295|CD19|930|CD19 molecule##DQ893016|CD19|930|CD19 molecule##DQ896261|CD19|930|CD19 molecule##AK130657|CD19|930|CD19 molecule##AK301167|CD19|930|CD19 molecule##AK304456|CD19|930|CD19 molecule##AK295229|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC046118|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##AK026935|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##NM_024816|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC058900|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##AK128456|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC068007|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC101741|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC112182|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AF458593|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##NM_032815|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK074761|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK304172|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC038961|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142448|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142449|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142450|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142451|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_032038|SPNS1|83985|spinster homolog 1 (Drosophila)##AK095677|SPNS1|83985|spinster homolog 1 (Drosophila)##AK289787|SPNS1|83985|spinster homolog 1 (Drosophila)##BC065235|SPNS1|83985|spinster homolog 1 (Drosophila)##AF370423|SPNS1|83985|spinster homolog 1 (Drosophila)##BC047741|SPNS1|83985|spinster homolog 1 (Drosophila)##AL390215|SPNS1|83985|spinster homolog 1 (Drosophila)##AF212371|SPNS1|83985|spinster homolog 1 (Drosophila)##BC008325|SPNS1|83985|spinster homolog 1 (Drosophila)##AM392778|SPIN1|10927|spindlin 1##AM393748|SPIN1|10927|spindlin 1##BC006156|SPNS1|83985|spinster homolog 1 (Drosophila)##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells	1.522038	CTCF.p2:7:0.990	CTCF.p2:83:0.532
chr11	72889223	72889341	reg1000308.p2	18.020	+	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	-36233	-	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-363800	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-363877	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	40062	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	40164	+	AK313942 TSC_hg19_v1_chr11_+_72929608	40334	+	AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.980585	CTCF.p2:8:0.981
chr1	155959272	155959410	reg1000703.p1	18.016	+	TSC_hg19_v1_chr1_-_155948944 AK295924	-10334	-	BC020567 TSC_hg19_v1_chr1_-_155948334 U72206 NM_001162383 NM_001162384	-11015	-	TSC_hg19_v1_chr1_-_155948245 AF486838	-11115	-	TSC_hg19_v1_chr1_-_155959876 AB014551	530	-	BC010085 AK222600 D37991 TSC_hg19_v1_chr1_-_155990703 BC000341 AY251536	31365	-	TSC_hg19_v1_chr1_-_155990725 X74104 BC011791 BX649192 AK300678 AK313821 NM_003145	31398	-	AK295924|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##BC020567|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##U72206|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##NM_001162383|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##NM_001162384|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AF486838|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AB014551|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AK222600|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##D37991|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##BC000341|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##AY251536|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##X74104|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##BX649192|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##AK300678|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##AK313821|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##NM_003145|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)	0.975803	CTCF.p2:12:0.976
chr21	46312812	46312948	reg1000630.p1	18.014	+	TSC_hg19_v1_chr21_+_46293937 BC092510	-18920	+	TSC_hg19_v1_chr21_-_46293609 AK315626 AK299204 AF149785 NM_004339	-19167	-	TSC_hg19_v1_chr21_-_46293607 BC012858 AK298557	-19277	-	TSC_hg19_v1_chr21_-_46340815 L78790 AK303488 M15395 AK128344	27917	-	AK222505 TSC_hg19_v1_chr21_-_46340824	27951	-	AB208909 TSC_hg19_v1_chr21_-_46340890 NM_000211	28039	-	AK315626|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AK299204|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AF149785|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##NM_004339|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##L78790|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK303488|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##M15395|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK128344|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK222505|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AB208909|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##NM_000211|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)	0.837585	CTCF.p2:0:0.838
chr19	40162748	40162861	reg1000381.p2	18.013	+	FJ613352 NM_001190441	-16259	+	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	-69619	+	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	-131984	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	32239	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	65835	-	NM_001143832	104429	+	FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##NM_001143832|LEUTX|342900|leucine twenty homeobox	0.98826	CTCF.p2:12:0.988
chr1	156415725	156415847	reg1000577.p1	18.009	+	NM_006365 U49857 BC059943 BC107686 BC050448 TSC_hg19_v1_chr1_-_156399219 AK095626 BC054045	-16510	-	AF193807 AK290840 AK294641 AK303799 AK303814 AY139092 AY139093 NM_020407 AK308556 TSC_hg19_v1_chr1_+_156339022 AK054780 BC065218	-76765	+	TSC_hg19_v1_chr1_-_156308103 NM_001008800 NM_005998	-107634	-	BC040949 TSC_hg19_v1_chr1_-_156460409	44617	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	54732	-	TSC_hg19_v1_chr1_-_156470563 BC018985 BC032479 AB210005 BC064988	54764	-	NM_006365|C1orf61|10485|chromosome 1 open reading frame 61##U49857|C1orf61|10485|chromosome 1 open reading frame 61##BC059943|C1orf61|10485|chromosome 1 open reading frame 61##BC107686|C1orf61|10485|chromosome 1 open reading frame 61##BC050448|C1orf61|10485|chromosome 1 open reading frame 61##AK095626|C1orf61|10485|chromosome 1 open reading frame 61##BC054045|C1orf61|10485|chromosome 1 open reading frame 61##AF193807|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK290840|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK294641|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303799|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303814|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139092|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139093|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_020407|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK308556|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK054780|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##BC065218|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_001008800|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_005998|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##BC040949|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D##BC018985|MEF2D|4209|myocyte enhancer factor 2D##BC032479|MEF2D|4209|myocyte enhancer factor 2D##AB210005|MEF2D|4209|myocyte enhancer factor 2D	0.122748	
chr4	9764849	9764958	reg1000476.p1	18.006	+	AF529414 NM_001040448	-318644	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-400050	+	AF544012 BC100991 NM_001105662	-404795	+	NM_000798	18354	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	258221	-	AK310895 BC018897 NM_001001290 AK096819	277019	-	AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF544012|USP17|391627|ubiquitin specific peptidase 17##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_000798|DRD5|1816|dopamine receptor D5##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.331673	CTCF.p2:-12:0.332
chr2	237421734	237421866	reg1000674.p1	17.996	+	BC043504 NM_024726 AK294105 BC028699	-5668	-	NM_212556 BX647589	-248806	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-345168	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	56628	+	BC036499 NM_006710 NM_198189	572218	+	TSC_hg19_v1_chr2_-_237994424 AK056246	572637	-	BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037	0.149295	
chr2	29419798	29419917	reg1000641.p1	17.995	+	TSC_hg19_v1_chr2_+_29338370 BC013862 NM_024692 AL834443	-81502	+	NM_001029883	-122731	-	AK296977 NM_199280	-215694	+	EU788003 EU788004 EU788005 EU788006 EU788007 EU788008 EU788009 EU788010 FJ838786 FJ838787 U62540 TSC_hg19_v1_chr2_-_30144453 AK296218 NM_004304	724597	-	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	949913	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	949976	+	BC013862|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_024692|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##AL834443|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71##AK296977|FAM179A|165186|family with sequence similarity 179, member A##NM_199280|FAM179A|165186|family with sequence similarity 179, member A##EU788003|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788004|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788005|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788006|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788007|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788008|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788009|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788010|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838786|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838787|ALK|238|anaplastic lymphoma receptor tyrosine kinase##U62540|ALK|238|anaplastic lymphoma receptor tyrosine kinase##AK296218|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_004304|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)	0.98576	CTCF.p2:9:0.986
chr22	23624089	23624218	reg1000243.p1	17.988	+	TSC_hg19_v1_chr22_+_23540316 X14677 X14675	-83748	+	TSC_hg19_v1_chr22_+_23523013 X06418 EU216058 EU216059 EU216061 EU216062 EU216063 EU216064 EU216065 EU216067 EU216068 EU216069 EU216070 EU216072	-101104	+	TSC_hg19_v1_chr22_+_23522745 AB209991	-101353	+	TSC_hg19_v1_chr22_-_23744738 AK056130 AK092581 AX747609 AK092530 AX747585	120590	-	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	298282	-	BC056888 AL080197 BC063390 AK310349 NM_016449	350343	-	X06418|BCR|613|breakpoint cluster region##EU216058|BCR|613|breakpoint cluster region##EU216059|BCR|613|breakpoint cluster region##EU216061|BCR|613|breakpoint cluster region##EU216062|BCR|613|breakpoint cluster region##EU216063|BCR|613|breakpoint cluster region##EU216064|BCR|613|breakpoint cluster region##EU216067|BCR|613|breakpoint cluster region##EU216069|BCR|613|breakpoint cluster region##EU216070|BCR|613|breakpoint cluster region##AB209991|BCR|613|breakpoint cluster region##AK056130|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092581|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092530|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43	1.226326	CTCF.p2:35:1.000	CTCF.p2:-46:0.227
chr7	26101426	26101545	reg1000345.p2	17.986	+	AB040290 AF330057 AF440392 NM_022150	-833405	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-881614	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-936545	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	90448	+	TSC_hg19_v1_chr7_-_26232151 BX538099	130666	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	138856	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.989208	CTCF.p2:3:0.989
chr8	37248115	37248225	reg1000536.p1	17.982	+	NM_001031836 AK302391 BC028701	-606300	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-2155183	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-3790675	-	TSC_hg19_v1_chr8_-_37457377 AK025743	209198	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	305147	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	345936	+	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2	0.683584	CTCF.p2:-2:0.684
chr20	31366370	31366496	reg1000611.p1	17.980	+	TSC_hg19_v1_chr20_+_31350397 AK300857 AK299915 AF156487 AF156488 AK295176 AK299821 AK299776	-16014	+	AF331857 DQ321787 NM_001207055 NM_001207056 NM_006892 NM_175848 NM_175849 TSC_hg19_v1_chr20_+_31350190	-16241	+	AK096307 BC022073 NM_001099339 NM_053041	-34626	-	TSC_hg19_v1_chr20_+_31367638 AF176228 NM_175850	1214	+	TSC_hg19_v1_chr20_+_31407759 NM_012325 AK297273 BC106068 U24166 BC109281 BC040410	41302	+	TSC_hg19_v1_chr20_+_31407780 AK312590 BC128442	41363	+	AK300857|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AK299915|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AF156487|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AF156488|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AK295176|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AK299821|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AK299776|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AF331857|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##DQ321787|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_001207055|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_001207056|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_006892|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_175848|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_175849|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AK096307|COMMD7|149951|COMM domain containing 7##BC022073|COMMD7|149951|COMM domain containing 7##NM_001099339|COMMD7|149951|COMM domain containing 7##NM_053041|COMMD7|149951|COMM domain containing 7##AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_012325|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##AK297273|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC106068|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##U24166|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC109281|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC040410|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##AK312590|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC128442|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1	0.999483	CTCF.p2:13:0.999
chr6	159125348	159125490	reg1000371.p1	17.979	+	TSC_hg19_v1_chr6_+_159071070 NM_001009991 NM_001242384 NM_001242394 NM_001242395 AK092729 AK298712 AX747692 BC085612	-54365	+	AB590427 CR456931 DQ892606 DQ892607 DQ895846 DQ895847 EU862237 U56255 TSC_hg19_v1_chr6_-_159065772 D50663 BC105588 BC029412 AK315601 NM_006519	-59645	-	BC033450 TSC_hg19_v1_chr6_+_158957752	-167717	+	J05021 X51521 TSC_hg19_v1_chr6_-_159239246	113803	-	TSC_hg19_v1_chr6_-_159239264 BC013903 AK299456 BC068458	113840	-	TSC_hg19_v1_chr6_-_159239276 NM_003379	113886	-	NM_001009991|SYTL3|94120|synaptotagmin-like 3##NM_001242384|SYTL3|94120|synaptotagmin-like 3##NM_001242394|SYTL3|94120|synaptotagmin-like 3##NM_001242395|SYTL3|94120|synaptotagmin-like 3##AK092729|SYTL3|94120|synaptotagmin-like 3##AK298712|SYTL3|94120|synaptotagmin-like 3##BC085612|SYTL3|94120|synaptotagmin-like 3##CR456931|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892606|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892607|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895846|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895847|DYNLT1|6993|dynein, light chain, Tctex-type 1##EU862237|DYNLT1|6993|dynein, light chain, Tctex-type 1##U56255|DYNLT1|6993|dynein, light chain, Tctex-type 1##D50663|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC105588|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC029412|DYNLT1|6993|dynein, light chain, Tctex-type 1##AK315601|DYNLT1|6993|dynein, light chain, Tctex-type 1##NM_006519|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC033450|TMEM181|57583|transmembrane protein 181##J05021|EZR|7430|ezrin##X51521|EZR|7430|ezrin##BC013903|EZR|7430|ezrin##AK299456|EZR|7430|ezrin##BC068458|EZR|7430|ezrin##NM_003379|EZR|7430|ezrin	0.997079	CTCF.p2:-12:0.997
chr19	44249565	44249685	reg1000499.p1	17.972	+	BC033853 NM_019612 BC066939	-29400	+	NM_001005376 NM_001005377 NM_002659	-75128	-	AF257789 CR456952 AB464026 DQ893017 DQ896262 M83246 TSC_hg19_v1_chr19_-_44174320 AK290774 AY029180 X51675 X74039 BC002788	-75322	-	TSC_hg19_v1_chr19_-_44259063 AK309830 BC008869 AL136606	9395	-	TSC_hg19_v1_chr19_-_44259074 AK022948	9468	-	TSC_hg19_v1_chr19_-_44259117 NM_019108	9503	-	BC033853|IRGC|56269|immunity-related GTPase family, cinema##NM_019612|IRGC|56269|immunity-related GTPase family, cinema##BC066939|IRGC|56269|immunity-related GTPase family, cinema##NM_001005376|PLAUR|5329|plasminogen activator, urokinase receptor##NM_001005377|PLAUR|5329|plasminogen activator, urokinase receptor##NM_002659|PLAUR|5329|plasminogen activator, urokinase receptor##AF257789|PLAUR|5329|plasminogen activator, urokinase receptor##CR456952|PLAUR|5329|plasminogen activator, urokinase receptor##DQ893017|PLAUR|5329|plasminogen activator, urokinase receptor##DQ896262|PLAUR|5329|plasminogen activator, urokinase receptor##M83246|PLAUR|5329|plasminogen activator, urokinase receptor##AK290774|PLAUR|5329|plasminogen activator, urokinase receptor##AY029180|PLAUR|5329|plasminogen activator, urokinase receptor##X51675|PLAUR|5329|plasminogen activator, urokinase receptor##X74039|PLAUR|5329|plasminogen activator, urokinase receptor##BC002788|PLAUR|5329|plasminogen activator, urokinase receptor##AK309830|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC008869|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL136606|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK022948|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_019108|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.877936	CTCF.p2:-2:0.878
chr5	135547979	135548113	reg1000973.p1	17.972	+	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-79462	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-79517	+	TSC_hg19_v1_chr5_+_135364731 AB590111 DQ892178 EU176690 CU678832 BT009820	-183312	+	NM_001167576 NM_001167577 NM_020389	153117	-	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	1286195	-	TSC_hg19_v1_chr5_-_136834420 AK094489	1286381	-	AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ892178|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##EU176690|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BT009820|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.999683	CTCF.p2:5:1.000
chr6	2998624	2998736	reg1000336.p1	17.972	+	AK094983 NM_001195291 NM_004568	-26282	-	TSC_hg19_v1_chr6_-_2971981 AK314578	-26631	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	-26869	-	TSC_hg19_v1_chr6_+_3000111 NM_000904 AK311746 AK056981 J02888	1448	+	AK314176 TSC_hg19_v1_chr6_+_3064200 AB208926	65486	+	BC126254 BC126256 HQ258488 NM_003804 U50062 AK304701	78384	+	AK094983|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_001195291|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_004568|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314578|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_000904|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK311746|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK056981|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##J02888|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK314176|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AB208926|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	0.900575	CTCF.p2:-11:0.901
chr11	95438806	95438931	reg1000342.p1	17.968	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	-474564	-	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-615856	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-638460	+	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	83783	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	83865	-	AK021591 TSC_hg19_v1_chr11_-_95522975 BC026013 NM_144664	84098	-	BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B##AK021591|FAM76B|143684|family with sequence similarity 76, member B##BC026013|FAM76B|143684|family with sequence similarity 76, member B##NM_144664|FAM76B|143684|family with sequence similarity 76, member B	0.894978	CTCF.p2:19:0.895
chr13	50181300	50181437	reg1000783.p1	17.968	+	TSC_hg19_v1_chr13_-_50159706 BC038104 AK096654 NM_018191	-21644	-	AL833821 TSC_hg19_v1_chr13_-_50159688 AJ319660 AF334406	-21703	-	NM_001040444 AK225986	-110839	+	AF441378 NM_138450	21066	+	TSC_hg19_v1_chr13_-_50265590 DQ891521 DQ894711 BC018478	84153	-	TSC_hg19_v1_chr13_-_50265611 BC021021 AF243433 BC092471 BC073152 NM_032565	84261	-	BC038104|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AK096654|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##NM_018191|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AL833821|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AJ319660|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AF334406|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##NM_001040444|PHF11|51131|PHD finger protein 11##AK225986|PHF11|51131|PHD finger protein 11##AF441378|ARL11|115761|ADP-ribosylation factor-like 11##NM_138450|ARL11|115761|ADP-ribosylation factor-like 11##DQ891521|EBPL|84650|emopamil binding protein-like##DQ894711|EBPL|84650|emopamil binding protein-like##BC018478|EBPL|84650|emopamil binding protein-like##BC021021|EBPL|84650|emopamil binding protein-like##AF243433|EBPL|84650|emopamil binding protein-like##BC092471|EBPL|84650|emopamil binding protein-like##BC073152|EBPL|84650|emopamil binding protein-like##NM_032565|EBPL|84650|emopamil binding protein-like	0.49201	CTCF.p2:12:0.234	CTCF.p2:13:0.258
chr1	156060638	156060761	reg1000628.p1	17.965	+	TSC_hg19_v1_chr1_+_156052358 AK056143	-8326	+	AY950677 NM_001093725 TSC_hg19_v1_chr1_-_156051805	-8901	-	AF274025 BC009831 NM_020387 BC033322 AF083124	-29726	+	TSC_hg19_v1_chr1_+_156084501 NM_005572 NM_170707 NM_170708 X03444 X03445 AK026584 AK122732 AY357727 BC014507 BC033088 BC000511	23794	+	TSC_hg19_v1_chr1_+_156084553 BC003162 AK130179	23852	+	TSC_hg19_v1_chr1_+_156084568 M13451	23871	+	AK056143|LMNA|4000|lamin A/C##AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)##NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)##AF274025|RAB25|57111|RAB25, member RAS oncogene family##BC009831|RAB25|57111|RAB25, member RAS oncogene family##NM_020387|RAB25|57111|RAB25, member RAS oncogene family##BC033322|RAB25|57111|RAB25, member RAS oncogene family##AF083124|RAB25|57111|RAB25, member RAS oncogene family##NM_005572|LMNA|4000|lamin A/C##NM_170707|LMNA|4000|lamin A/C##NM_170708|LMNA|4000|lamin A/C##X03444|LMNA|4000|lamin A/C##X03445|LMNA|4000|lamin A/C##AK026584|LMNA|4000|lamin A/C##AK122732|LMNA|4000|lamin A/C##AY357727|LMNA|4000|lamin A/C##BC014507|LMNA|4000|lamin A/C##BC033088|LMNA|4000|lamin A/C##BC000511|LMNA|4000|lamin A/C##BC003162|LMNA|4000|lamin A/C##AK130179|LMNA|4000|lamin A/C##M13451|LMNA|4000|lamin A/C	0.999924	CTCF.p2:-21:1.000
chr2	45208878	45208997	reg1000655.p1	17.963	+	AJ012611 NM_005413 AL162671	-39891	+	NM_024766 TSC_hg19_v1_chr2_+_44589085 BC029359 AK027104 BC053733	-619845	+	AK131463 NM_001171603 NM_001171617	-619966	-	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	27613	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	586191	-	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	629470	-	AJ012611|SIX3|6496|SIX homeobox 3##NM_005413|SIX3|6496|SIX homeobox 3##AL162671|SIX3|6496|SIX homeobox 3##NM_024766|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC029359|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK027104|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC053733|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK131463|PREPL|9581|prolyl endopeptidase-like##NM_001171603|PREPL|9581|prolyl endopeptidase-like##NM_001171617|PREPL|9581|prolyl endopeptidase-like##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1	0.999478	CTCF.p2:-10:0.999
chr1	31192192	31192340	reg1000681.p1	17.962	+	TSC_hg19_v1_chr1_+_31191648 AK057725	-635	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-1629218	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-1634819	-	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	4166	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	38366	-	TSC_hg19_v1_chr1_-_31230697 NM_006762	38424	-	AK057725|LOC100129196|100129196|uncharacterized LOC100129196##NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5##NM_006762|LAPTM5|7805|lysosomal protein transmembrane 5	1.093473	CTCF.p2:-20:1.000
chr22	44481740	44481859	reg1000311.p2	17.962	+	BC039811 NM_001243385	-16803	+	AK308443 NM_001243386	-59616	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	-61600	+	NM_001137605 AK309348 AK293360	87057	+	NM_022141 AK225929 AK307294 BC034406 AF237772	95013	+	AK307299 TSC_hg19_v1_chr22_+_44577227 AK311264	95425	+	BC039811|PARVB|29780|parvin, beta##NM_001243385|PARVB|29780|parvin, beta##AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##NM_001137605|PARVG|64098|parvin, gamma##AK309348|PARVG|64098|parvin, gamma##AK293360|PARVG|64098|parvin, gamma##NM_022141|PARVG|64098|parvin, gamma##AK225929|PARVG|64098|parvin, gamma##AK307294|PARVG|64098|parvin, gamma##BC034406|PARVG|64098|parvin, gamma##AF237772|PARVG|64098|parvin, gamma##AK307299|PARVG|64098|parvin, gamma	0.19908	
chr7	102031285	102031437	reg1000379.p4	17.962	+	TSC_hg19_v1_chr7_+_102023018 AK098134	-8328	+	TSC_hg19_v1_chr7_+_102004338 BC048257 BC066362	-27009	+	TSC_hg19_v1_chr7_+_102004329 NM_001242713 BC063572 AK098276	-27050	+	NM_024653 TSC_hg19_v1_chr7_+_102036839 AK023964 BC014298 DQ893168 DQ896466 AK294664	5481	+	TSC_hg19_v1_chr7_+_102073995 NM_001126340 NM_032831	42616	+	TSC_hg19_v1_chr7_+_102074021 AK056497 AK027639 AK300574	42680	+	NM_001242713|LOC100289561|100289561|uncharacterized LOC100289561##BC063572|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough##AK098276|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough##NM_024653|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK023964|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##BC014298|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ893168|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ896466|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK294664|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##NM_001126340|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_032831|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK056497|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK027639|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK300574|ORAI2|80228|ORAI calcium release-activated calcium modulator 2	0.999915	CTCF.p2:8:1.000
chr12	7613336	7613447	reg1000397.p1	17.958	+	GQ397482 AY358856 AK303372 AF264014 NM_174941 BC104962 BC104964	-16654	-	NM_001080454	-156464	+	BC010621 X84899 NM_000319 U19721 AB527550 DQ891142 DQ894321 CU679763	-270427	+	DQ058615 TSC_hg19_v1_chr12_-_7656374 BC051281 AK226017 Z22968 Z22969 Z22970 Z22971 NM_004244 NM_203416	42959	-	U72890 L25877 U72891 BC101405 BC101404 BC101972 BC096158 BC096159 BC096160 BC096161 BC101973 BC144708 NM_001644	205093	-	CU689052 DQ892661 DQ895901 AF110641 AF263538 NM_020634 BC030959 AY358875	234965	-	GQ397482|CD163L1|283316|CD163 molecule-like 1##AK303372|CD163L1|283316|CD163 molecule-like 1##AF264014|CD163L1|283316|CD163 molecule-like 1##NM_174941|CD163L1|283316|CD163 molecule-like 1##BC104962|CD163L1|283316|CD163 molecule-like 1##BC104964|CD163L1|283316|CD163 molecule-like 1##NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4##BC010621|PEX5|5830|peroxisomal biogenesis factor 5##X84899|PEX5|5830|peroxisomal biogenesis factor 5##NM_000319|PEX5|5830|peroxisomal biogenesis factor 5##U19721|PEX5|5830|peroxisomal biogenesis factor 5##DQ891142|PEX5|5830|peroxisomal biogenesis factor 5##DQ894321|PEX5|5830|peroxisomal biogenesis factor 5##DQ058615|CD163|9332|CD163 molecule##BC051281|CD163|9332|CD163 molecule##AK226017|CD163|9332|CD163 molecule##Z22968|CD163|9332|CD163 molecule##Z22969|CD163|9332|CD163 molecule##Z22970|CD163|9332|CD163 molecule##Z22971|CD163|9332|CD163 molecule##NM_004244|CD163|9332|CD163 molecule##NM_203416|CD163|9332|CD163 molecule##U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##DQ892661|GDF3|9573|growth differentiation factor 3##DQ895901|GDF3|9573|growth differentiation factor 3##AF110641|GDF3|9573|growth differentiation factor 3##AF263538|GDF3|9573|growth differentiation factor 3##NM_020634|GDF3|9573|growth differentiation factor 3##BC030959|GDF3|9573|growth differentiation factor 3##AY358875|GDF3|9573|growth differentiation factor 3	0.236448	CTCF.p2:13:0.236
chr20	30200743	30200892	reg1000408.p1	17.953	+	TSC_hg19_v1_chr20_+_30193091 NM_002165 NM_181353 AK313786 BC012420 BC000613 S78986 X77956 AK291152 D13889 D13890 S78825 AB463776 CU680316 DQ891293 DQ893342 DQ894477 DQ896657 EU176458 EU176468 EU176808 BT007443	-7681	+	TSC_hg19_v1_chr20_+_30135200 BC053868	-65583	+	TSC_hg19_v1_chr20_+_30102316 AJ420895 DQ896206 CU687568 AF515663	-98484	+	AF257180 NM_032609 BC057779	24885	+	BC032024 TSC_hg19_v1_chr20_-_30288101	87280	-	TSC_hg19_v1_chr20_-_30310672 AY263336 BC019307 NM_001191 NM_138578 AK290968 AY263335 CR936637	109849	-	NM_002165|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##NM_181353|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK313786|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC012420|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC000613|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78986|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##X77956|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK291152|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13889|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13890|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78825|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ891293|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ893342|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ894477|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ896657|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176458|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176468|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176808|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BT007443|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AJ420895|HM13|81502|histocompatibility (minor) 13##DQ896206|HM13|81502|histocompatibility (minor) 13##AF515663|HM13|81502|histocompatibility (minor) 13##AF257180|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_032609|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##BC057779|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##AY263336|BCL2L1|598|BCL2-like 1##BC019307|BCL2L1|598|BCL2-like 1##NM_001191|BCL2L1|598|BCL2-like 1##NM_138578|BCL2L1|598|BCL2-like 1##AK290968|BCL2L1|598|BCL2-like 1##AY263335|BCL2L1|598|BCL2-like 1##CR936637|BCL2L1|598|BCL2-like 1	1.712679	CTCF.p2:-36:0.770	CTCF.p2:51:0.942
chr16	86597512	86597667	reg1000462.p1	17.949	+	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	-8817	-	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	-53349	+	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	-53433	+	BC113437 BC113439 NM_005251	3267	+	BC100027 NM_005250	14525	+	TSC_hg19_v1_chr16_-_87350760 AB528835 AM392822 AM393070	753211	-	AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1##AM392822|C16orf95|100506581|chromosome 16 open reading frame 95##AM393070|C16orf95|100506581|chromosome 16 open reading frame 95	1.408341	CTCF.p2:-42:0.927	CTCF.p2:44:0.482
chr1	153541113	153541245	reg1000534.p1	17.946	+	BC002829 NM_005978	-2874	-	BC012893 NM_002960 Z18948	-19454	-	BC000838 BC024974 AK292083 BC016300 NM_002961 NM_019554 TSC_hg19_v1_chr1_-_153518283	-22905	-	BC095462 U92985 TSC_hg19_v1_chr1_-_153581484 AK290804	40286	-	TSC_hg19_v1_chr1_-_153585546 BC010541 NM_080388 AY221961 BC019099 AY762098	44385	-	AY007220 TSC_hg19_v1_chr1_-_153588799 NM_020672	47619	-	BC002829|S100A2|6273|S100 calcium binding protein A2##NM_005978|S100A2|6273|S100 calcium binding protein A2##BC012893|S100A3|6274|S100 calcium binding protein A3##NM_002960|S100A3|6274|S100 calcium binding protein A3##Z18948|S100A3|6274|S100 calcium binding protein A3##BC000838|S100A4|6275|S100 calcium binding protein A4##BC024974|S100A4|6275|S100 calcium binding protein A4##AK292083|S100A4|6275|S100 calcium binding protein A4##BC016300|S100A4|6275|S100 calcium binding protein A4##NM_002961|S100A4|6275|S100 calcium binding protein A4##NM_019554|S100A4|6275|S100 calcium binding protein A4##BC095462|S100A16|140576|S100 calcium binding protein A16##U92985|S100A16|140576|S100 calcium binding protein A16##AK290804|S100A16|140576|S100 calcium binding protein A16##BC010541|S100A16|140576|S100 calcium binding protein A16##NM_080388|S100A16|140576|S100 calcium binding protein A16##AY221961|S100A16|140576|S100 calcium binding protein A16##BC019099|S100A16|140576|S100 calcium binding protein A16##AY762098|S100A16|140576|S100 calcium binding protein A16##AY007220|S100A14|57402|S100 calcium binding protein A14##NM_020672|S100A14|57402|S100 calcium binding protein A14	0.999572	CTCF.p2:8:1.000
chr19	46905602	46905702	reg1000302.p1	17.946	+	TSC_hg19_v1_chr19_+_46850348 AB527518 AK293402 AK297095 BT007275 BC000750 BC001831 X89416 U25174	-55293	+	TSC_hg19_v1_chr19_+_46850343 NM_001204284 NM_006247 BC001970 AK223222 AK312683	-55358	+	AK021881 TSC_hg19_v1_chr19_+_46844054	-61644	+	AK297668 AL136609 JN703457 NM_032040	11219	-	AL834344 TSC_hg19_v1_chr19_-_46974751 AK290218 BC051688	69070	-	TSC_hg19_v1_chr19_-_46974789 BC032508 NM_001103149 NM_018215	69153	-	AK293402|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK297095|PPP5C|5536|protein phosphatase 5, catalytic subunit##BT007275|PPP5C|5536|protein phosphatase 5, catalytic subunit##BC000750|PPP5C|5536|protein phosphatase 5, catalytic subunit##BC001831|PPP5C|5536|protein phosphatase 5, catalytic subunit##X89416|PPP5C|5536|protein phosphatase 5, catalytic subunit##U25174|PPP5C|5536|protein phosphatase 5, catalytic subunit##NM_001204284|PPP5C|5536|protein phosphatase 5, catalytic subunit##NM_006247|PPP5C|5536|protein phosphatase 5, catalytic subunit##BC001970|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK223222|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK312683|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK021881|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK297668|CCDC8|83987|coiled-coil domain containing 8##AL136609|CCDC8|83987|coiled-coil domain containing 8##JN703457|CCDC8|83987|coiled-coil domain containing 8##NM_032040|CCDC8|83987|coiled-coil domain containing 8##AL834344|PNMAL1|55228|PNMA-like 1##AK290218|PNMAL1|55228|PNMA-like 1##BC051688|PNMAL1|55228|PNMA-like 1##BC032508|PNMAL1|55228|PNMA-like 1##NM_001103149|PNMAL1|55228|PNMA-like 1##NM_018215|PNMAL1|55228|PNMA-like 1	0.994686	CTCF.p2:-4:0.995
chr11	120105871	120105996	reg1000382.p1	17.945	+	TSC_hg19_v1_chr11_+_120081739 BC047726 NM_178507 BC008339	-24220	+	TSC_hg19_v1_chr11_-_120008858 AF230388 AF230389 L24203 NM_012101	-97078	-	BC017352 BC010644 TSC_hg19_v1_chr11_-_120008822 AK223090 AK122720	-97121	-	AK302212 NM_001244682	1415	+	AK291993 NM_014352 AF162278 BC101649 BC143593 BC143594 BC143595 AF133895 AJ012214 EU446698	5044	+	AK128040 NM_001198670 NM_001198671 NM_001198672 NM_001198673 NM_001198674 NM_001198675 NM_174926	89904	+	BC047726|OAF|220323|OAF homolog (Drosophila)##NM_178507|OAF|220323|OAF homolog (Drosophila)##BC008339|OAF|220323|OAF homolog (Drosophila)##AF230388|TRIM29|23650|tripartite motif containing 29##AF230389|TRIM29|23650|tripartite motif containing 29##L24203|TRIM29|23650|tripartite motif containing 29##NM_012101|TRIM29|23650|tripartite motif containing 29##BC017352|TRIM29|23650|tripartite motif containing 29##BC010644|TRIM29|23650|tripartite motif containing 29##AK223090|TRIM29|23650|tripartite motif containing 29##AK122720|TRIM29|23650|tripartite motif containing 29##AK302212|POU2F3|25833|POU class 2 homeobox 3##NM_001244682|POU2F3|25833|POU class 2 homeobox 3##AK291993|POU2F3|25833|POU class 2 homeobox 3##NM_014352|POU2F3|25833|POU class 2 homeobox 3##AF162278|POU2F3|25833|POU class 2 homeobox 3##BC101649|POU2F3|25833|POU class 2 homeobox 3##BC143593|POU2F3|25833|POU class 2 homeobox 3##BC143594|POU2F3|25833|POU class 2 homeobox 3##BC143595|POU2F3|25833|POU class 2 homeobox 3##AF133895|POU2F3|25833|POU class 2 homeobox 3##AJ012214|POU2F3|25833|POU class 2 homeobox 3##EU446698|POU2F3|25833|POU class 2 homeobox 3##AK128040|TMEM136|219902|transmembrane protein 136##NM_001198670|TMEM136|219902|transmembrane protein 136##NM_001198671|TMEM136|219902|transmembrane protein 136##NM_001198672|TMEM136|219902|transmembrane protein 136##NM_001198673|TMEM136|219902|transmembrane protein 136##NM_001198674|TMEM136|219902|transmembrane protein 136##NM_001198675|TMEM136|219902|transmembrane protein 136##NM_174926|TMEM136|219902|transmembrane protein 136	0.975752	CTCF.p2:-12:0.976
chr17	75052464	75052582	reg1000626.p1	17.943	+	AB114297 NM_198955 BC144361	-183763	+	TSC_hg19_v1_chr17_+_74864556 AK057861 AB235153 BC041577 NM_001199172 NM_144677 BC062354	-187857	+	TSC_hg19_v1_chr17_+_74734111 AK308058 AF015184 AK000233	-318370	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	32274	+	NM_001204410 FM995496 AF130050	32745	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	84511	+	AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AK308058|MFSD11|79157|major facilitator superfamily domain containing 11##AF015184|MFSD11|79157|major facilitator superfamily domain containing 11##AK000233|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001204410|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995496|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AF130050|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)	0.995878	CTCF.p2:-3:0.996
chr17	27077207	27077349	reg1000551.p1	17.940	+	TSC_hg19_v1_chr17_+_27071025 NM_004295 BC001769 X80200 AK300804 AY937222 AY937223 AY937224 AY937225 AB529167 DQ892825 DQ896071 CU674876 AF082185	-6209	+	BC112240 BC113705 AK301429 AY242354 AY267371 HQ258347 NM_178170	-21464	+	NM_001160407	-23330	-	TSC_hg19_v1_chr17_-_27139467 AK095569	62169	-	BC021228 TSC_hg19_v1_chr17_-_27169811 BX647766 AK299477 AK001562 AK057665 NM_001077498 NM_018182	92512	-	TSC_hg19_v1_chr17_+_27182033 AB049388 AK023342 AY007435 BX537542 BC019094 NM_005702 CU676380 DQ892626 DQ895866 AF082657 AF082658	104745	+	NM_004295|TRAF4|9618|TNF receptor-associated factor 4##BC001769|TRAF4|9618|TNF receptor-associated factor 4##X80200|TRAF4|9618|TNF receptor-associated factor 4##AK300804|TRAF4|9618|TNF receptor-associated factor 4##AY937222|TRAF4|9618|TNF receptor-associated factor 4##AY937223|TRAF4|9618|TNF receptor-associated factor 4##AY937224|TRAF4|9618|TNF receptor-associated factor 4##DQ892825|TRAF4|9618|TNF receptor-associated factor 4##DQ896071|TRAF4|9618|TNF receptor-associated factor 4##AF082185|TRAF4|9618|TNF receptor-associated factor 4##BC112240|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##BC113705|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AK301429|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY242354|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY267371|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##HQ258347|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_178170|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_001160407|TLCD1|116238|TLC domain containing 1##AK095569|C17orf63|55731|chromosome 17 open reading frame 63##BC021228|C17orf63|55731|chromosome 17 open reading frame 63##BX647766|C17orf63|55731|chromosome 17 open reading frame 63##AK299477|C17orf63|55731|chromosome 17 open reading frame 63##AK001562|C17orf63|55731|chromosome 17 open reading frame 63##AK057665|C17orf63|55731|chromosome 17 open reading frame 63##NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63##NM_018182|C17orf63|55731|chromosome 17 open reading frame 63##AB049388|ERAL1|26284|Era G-protein-like 1 (E. coli)##AK023342|ERAL1|26284|Era G-protein-like 1 (E. coli)##AY007435|ERAL1|26284|Era G-protein-like 1 (E. coli)##BX537542|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC019094|ERAL1|26284|Era G-protein-like 1 (E. coli)##NM_005702|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ892626|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ895866|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082657|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082658|ERAL1|26284|Era G-protein-like 1 (E. coli)	1.059284	CTCF.p2:22:0.879
chr19	4811809	4811936	reg1000779.p1	17.940	+	TSC_hg19_v1_chr19_+_4791757 AK074232 BC004988 AY356352 EU446817 AB384759 AJ311359	-20060	+	AK126532 AK315554 TSC_hg19_v1_chr19_+_4791756	-20116	+	NM_018708 TSC_hg19_v1_chr19_+_4791745	-20136	+	AF070530 TSC_hg19_v1_chr19_-_4817612	5686	-	TSC_hg19_v1_chr19_-_4831725 BC035331 NM_182919	19853	-	TSC_hg19_v1_chr19_-_4867650 AK225045 BC001590	55773	-	AK074232|FEM1A|55527|fem-1 homolog a (C. elegans)##BC004988|FEM1A|55527|fem-1 homolog a (C. elegans)##AY356352|FEM1A|55527|fem-1 homolog a (C. elegans)##EU446817|FEM1A|55527|fem-1 homolog a (C. elegans)##AJ311359|FEM1A|55527|fem-1 homolog a (C. elegans)##AK126532|FEM1A|55527|fem-1 homolog a (C. elegans)##AK315554|FEM1A|55527|fem-1 homolog a (C. elegans)##NM_018708|FEM1A|55527|fem-1 homolog a (C. elegans)##AF070530|TICAM1|148022|toll-like receptor adaptor molecule 1##BC035331|TICAM1|148022|toll-like receptor adaptor molecule 1##NM_182919|TICAM1|148022|toll-like receptor adaptor molecule 1##AK225045|PLIN3|10226|perilipin 3##BC001590|PLIN3|10226|perilipin 3	0.998899	CTCF.p2:0:0.999
chr17	19350490	19350615	reg1000520.p1	17.934	+	AK309372 NM_007148 AK313844 AK226052 BC038896 BC053989 AB026054 AB590107 EU446727	-35948	+	L38486 TSC_hg19_v1_chr17_-_19290504 BC047725 AK293056 AK304528 NM_001198695 NM_002404	-60051	-	TSC_hg19_v1_chr17_+_19282061 AY534741 AB527827 HQ257997	-68417	+	AK301854 TSC_hg19_v1_chr17_+_19437179 AK222625 AK001709 AK302620 NM_018242 BC022390 AK225360 BC010661 BC058882 BC050592 CU691318	86642	+	U46689 TSC_hg19_v1_chr17_+_19552087 NM_000382 NM_001031806 AK292381 L47162 AK025677 AK315096 BC002430 DQ895880 EU176377 CR457422 AB208894	201591	+	BC062614 AB250364 AB250701 BC035288 BC050578 AK055758 AK307647 NM_001099646 NM_152908	269408	-	AK309372|RNF112|7732|ring finger protein 112##NM_007148|RNF112|7732|ring finger protein 112##AK313844|RNF112|7732|ring finger protein 112##AK226052|RNF112|7732|ring finger protein 112##BC038896|RNF112|7732|ring finger protein 112##BC053989|RNF112|7732|ring finger protein 112##AB026054|RNF112|7732|ring finger protein 112##EU446727|RNF112|7732|ring finger protein 112##L38486|MFAP4|4239|microfibrillar-associated protein 4##BC047725|MFAP4|4239|microfibrillar-associated protein 4##AK293056|MFAP4|4239|microfibrillar-associated protein 4##AK304528|MFAP4|4239|microfibrillar-associated protein 4##NM_001198695|MFAP4|4239|microfibrillar-associated protein 4##NM_002404|MFAP4|4239|microfibrillar-associated protein 4##AY534741|MAPK7|5598|mitogen-activated protein kinase 7##HQ257997|MAPK7|5598|mitogen-activated protein kinase 7##AK301854|SLC47A1|55244|solute carrier family 47, member 1##AK222625|SLC47A1|55244|solute carrier family 47, member 1##AK001709|SLC47A1|55244|solute carrier family 47, member 1##AK302620|SLC47A1|55244|solute carrier family 47, member 1##NM_018242|SLC47A1|55244|solute carrier family 47, member 1##AK225360|SLC47A1|55244|solute carrier family 47, member 1##BC010661|SLC47A1|55244|solute carrier family 47, member 1##BC058882|SLC47A1|55244|solute carrier family 47, member 1##BC050592|SLC47A1|55244|solute carrier family 47, member 1##U46689|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_000382|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_001031806|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK292381|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##L47162|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK025677|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK315096|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC002430|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##DQ895880|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##EU176377|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##CR457422|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AB208894|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC062614|SLC47A2|146802|solute carrier family 47, member 2##AB250364|SLC47A2|146802|solute carrier family 47, member 2##AB250701|SLC47A2|146802|solute carrier family 47, member 2##BC035288|SLC47A2|146802|solute carrier family 47, member 2##BC050578|SLC47A2|146802|solute carrier family 47, member 2##AK055758|SLC47A2|146802|solute carrier family 47, member 2##AK307647|SLC47A2|146802|solute carrier family 47, member 2##NM_001099646|SLC47A2|146802|solute carrier family 47, member 2##NM_152908|SLC47A2|146802|solute carrier family 47, member 2	0.94314	CTCF.p2:10:0.943
chr1	16514362	16514488	reg1000715.p1	17.924	+	EU826606 DQ895231 EU176326 TSC_hg19_v1_chr1_-_16482565 M59371 BC037166 AK296788 NM_004431	-31899	-	AB463624 CU691488 AK094085 BC037394 TSC_hg19_v1_chr1_-_16400144 BC016848 NM_182623	-114368	-	AK098217 NM_001165945	-139142	+	BC040640 NM_153213 AK091281 AX746893 AK297707	24709	-	NM_030907	49233	-	TSC_hg19_v1_chr1_-_16678922 AK310671	164493	-	EU826606|EPHA2|1969|EPH receptor A2##DQ895231|EPHA2|1969|EPH receptor A2##EU176326|EPHA2|1969|EPH receptor A2##M59371|EPHA2|1969|EPH receptor A2##BC037166|EPHA2|1969|EPH receptor A2##AK296788|EPHA2|1969|EPH receptor A2##NM_004431|EPHA2|1969|EPH receptor A2##AK094085|FAM131C|348487|family with sequence similarity 131, member C##BC037394|FAM131C|348487|family with sequence similarity 131, member C##BC016848|FAM131C|348487|family with sequence similarity 131, member C##NM_182623|FAM131C|348487|family with sequence similarity 131, member C##AK098217|CLCNKB|1188|chloride channel Kb##NM_001165945|CLCNKB|1188|chloride channel Kb##BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##NM_030907|RSG1|79363|REM2 and RAB-like small GTPase 1##AK310671|FBXO42|54455|F-box protein 42	0.999735	CTCF.p2:1:1.000
chr16	75267881	75267995	reg1000402.p1	17.919	+	TSC_hg19_v1_chr16_+_75252885 NM_001906	-15052	+	TSC_hg19_v1_chr16_-_75241062 AK124403 AK291822 AK225933 NM_001025200	-26856	-	AK296560 TSC_hg19_v1_chr16_+_75182389 AK291372 NM_153688 AK094761 AK308134 BC064604	-85504	+	TSC_hg19_v1_chr16_-_75272524 AK124844	4602	-	NM_001170721	5041	-	AK294513 NM_001170719	14242	-	NM_001906|CTRB1|1504|chymotrypsinogen B1##AK124403|CTRB1|1504|chymotrypsinogen B1##AK291822|CTRB2|440387|chymotrypsinogen B2##AK225933|CTRB2|440387|chymotrypsinogen B2##NM_001025200|CTRB2|440387|chymotrypsinogen B2##AK296560|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK291372|ZFP1|162239|zinc finger protein 1 homolog (mouse)##NM_153688|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK094761|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK308134|ZFP1|162239|zinc finger protein 1 homolog (mouse)##BC064604|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK124844|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170721|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK294513|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170719|BCAR1|9564|breast cancer anti-estrogen resistance 1	1.010176	CTCF.p2:-8:0.999
chr1	40804497	40804630	reg1000664.p1	17.918	+	TSC_hg19_v1_chr1_-_40783378 BC065715	-21135	-	TSC_hg19_v1_chr1_-_40782992 BC041479	-21543	-	TSC_hg19_v1_chr1_-_40782958 BC136326 BC136327 NM_001852	-21620	-	TSC_hg19_v1_chr1_+_40839382 NM_022733	34812	+	TSC_hg19_v1_chr1_+_40839438 AK313105	34876	+	NM_001198978 AK303975 AL133206	35763	+	BC065715|COL9A2|1298|collagen, type IX, alpha 2##BC041479|COL9A2|1298|collagen, type IX, alpha 2##BC136326|COL9A2|1298|collagen, type IX, alpha 2##BC136327|COL9A2|1298|collagen, type IX, alpha 2##NM_001852|COL9A2|1298|collagen, type IX, alpha 2##NM_022733|SMAP2|64744|small ArfGAP2##AK313105|SMAP2|64744|small ArfGAP2##NM_001198978|SMAP2|64744|small ArfGAP2##AK303975|SMAP2|64744|small ArfGAP2##AL133206|SMAP2|64744|small ArfGAP2	0.868319	CTCF.p2:-2:0.868
chr17	7199832	7199941	reg1000310.p1	17.917	+	TSC_hg19_v1_chr17_-_7197897 AB208818	-1959	-	TSC_hg19_v1_chr17_-_7197866 AF096834 NM_015982	-2007	-	TSC_hg19_v1_chr17_-_7197854 BC033800 BC047760 AK315035	-2051	-	AY129319 NM_001143760	10431	+	TSC_hg19_v1_chr17_+_7210855 NM_001970 AY129320	10976	+	TSC_hg19_v1_chr17_+_7210946 BC000751 BC001832 BC107779 BC030160 BC080196 AK292615 AK222585 BC085015	11108	+	AB208818|YBX2|51087|Y box binding protein 2##AF096834|YBX2|51087|Y box binding protein 2##NM_015982|YBX2|51087|Y box binding protein 2##BC033800|YBX2|51087|Y box binding protein 2##BC047760|YBX2|51087|Y box binding protein 2##AK315035|YBX2|51087|Y box binding protein 2##AY129319|EIF5A|1984|eukaryotic translation initiation factor 5A##NM_001143760|EIF5A|1984|eukaryotic translation initiation factor 5A##NM_001970|EIF5A|1984|eukaryotic translation initiation factor 5A##AY129320|EIF5A|1984|eukaryotic translation initiation factor 5A##BC000751|EIF5A|1984|eukaryotic translation initiation factor 5A##BC001832|EIF5A|1984|eukaryotic translation initiation factor 5A##BC107779|EIF5A|1984|eukaryotic translation initiation factor 5A##BC030160|EIF5A|1984|eukaryotic translation initiation factor 5A##BC080196|EIF5A|1984|eukaryotic translation initiation factor 5A##AK292615|EIF5A|1984|eukaryotic translation initiation factor 5A##AK222585|EIF5A|1984|eukaryotic translation initiation factor 5A##BC085015|EIF5A|1984|eukaryotic translation initiation factor 5A	0.980202	CTCF.p2:2:0.980
chr4	15957981	15958111	reg1000491.p1	17.916	+	NM_005130	-17684	-	BC003628 M60047 BC008910 BC018852 AK291307 TSC_hg19_v1_chr4_-_15939972	-18086	-	TSC_hg19_v1_chr4_+_15779950 AK303169 NM_001775 D84276 AK313268 M34461 BC007964 D84277 DQ893184 EU176777 AK297592	-178075	+	AF361936 CU693032 DQ892062 DQ895256 AB529223 BC025720 AB021123 AY358978 NM_031950	6758	-	NM_001145849 NM_001145850 NM_001145851 NM_001145852 NM_006017	119694	-	TSC_hg19_v1_chr4_-_16085325 AF117225	127285	-	NM_005130|FGFBP1|9982|fibroblast growth factor binding protein 1##BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1##M60047|FGFBP1|9982|fibroblast growth factor binding protein 1##BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1##BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1##AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1##AK303169|CD38|952|CD38 molecule##NM_001775|CD38|952|CD38 molecule##D84276|CD38|952|CD38 molecule##AK313268|CD38|952|CD38 molecule##M34461|CD38|952|CD38 molecule##BC007964|CD38|952|CD38 molecule##D84277|CD38|952|CD38 molecule##DQ893184|CD38|952|CD38 molecule##EU176777|CD38|952|CD38 molecule##AK297592|CD38|952|CD38 molecule##AF361936|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ892062|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ895256|FGFBP2|83888|fibroblast growth factor binding protein 2##BC025720|FGFBP2|83888|fibroblast growth factor binding protein 2##AB021123|FGFBP2|83888|fibroblast growth factor binding protein 2##AY358978|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_031950|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_001145849|PROM1|8842|prominin 1##NM_001145850|PROM1|8842|prominin 1##NM_001145851|PROM1|8842|prominin 1##NM_001145852|PROM1|8842|prominin 1##NM_006017|PROM1|8842|prominin 1##AF117225|PROM1|8842|prominin 1	0.983462	CTCF.p2:23:0.983
chr1	9551237	9551353	reg1000433.p1	17.915	+	TSC_hg19_v1_chr1_+_9415945 CU677397	-135349	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	-198326	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	-198358	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	48237	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	48341	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	97661	+	AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201	0.946613	CTCF.p2:11:0.947
chr3	52157256	52157389	reg1000717.p1	17.911	+	X93921 TSC_hg19_v1_chr3_-_52090192 BC019107 AF508727 BC104880 BC104882 NM_001947	-67047	-	BC008926 NM_000992 TSC_hg19_v1_chr3_-_52029968	-127359	-	TSC_hg19_v1_chr3_-_52029912 BC070190 AK289538 AK311884 D28412	-127409	-	TSC_hg19_v1_chr3_-_52188413 BC119692 AK075289 BC119693 AK315688	31108	-	BC110877 NM_001161580 NM_001161581 NM_015426	31383	-	TSC_hg19_v1_chr3_+_52232145 NM_199166 AK312566 NM_000688 AK300993 AB063322 AY260745	74795	+	X93921|DUSP7|1849|dual specificity phosphatase 7##BC019107|DUSP7|1849|dual specificity phosphatase 7##AF508727|DUSP7|1849|dual specificity phosphatase 7##BC104880|DUSP7|1849|dual specificity phosphatase 7##BC104882|DUSP7|1849|dual specificity phosphatase 7##NM_001947|DUSP7|1849|dual specificity phosphatase 7##BC008926|RPL29|6159|ribosomal protein L29##NM_000992|RPL29|6159|ribosomal protein L29##BC070190|RPL29|6159|ribosomal protein L29##AK289538|RPL29|6159|ribosomal protein L29##AK311884|RPL29|6159|ribosomal protein L29##D28412|RPL29|6159|ribosomal protein L29##BC119692|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK075289|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC119693|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK315688|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC110877|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161580|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161581|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_015426|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_199166|ALAS1|211|aminolevulinate, delta-, synthase 1##AK312566|ALAS1|211|aminolevulinate, delta-, synthase 1##NM_000688|ALAS1|211|aminolevulinate, delta-, synthase 1##AK300993|ALAS1|211|aminolevulinate, delta-, synthase 1##AB063322|ALAS1|211|aminolevulinate, delta-, synthase 1##AY260745|ALAS1|211|aminolevulinate, delta-, synthase 1	0.470586	CTCF.p2:4:0.471
chr1	27989752	27989895	reg1000372.p2	17.908	+	TSC_hg19_v1_chr1_-_27961656 BC064382 AK130188 NM_005248	-28137	-	M27454 AK301078 BC002836 AK304846 NM_001042729	-36748	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	-37153	-	TSC_hg19_v1_chr1_-_27998690 X02492 BC011601 BC015603	8854	-	TSC_hg19_v1_chr1_-_27998704 AK024814 AK314488	8886	-	TSC_hg19_v1_chr1_-_27998734 NM_002038 NM_022872 NM_022873	8916	-	BC064382|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK130188|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_005248|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##M27454|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK301078|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042729|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##X02492|IFI6|2537|interferon, alpha-inducible protein 6##BC011601|IFI6|2537|interferon, alpha-inducible protein 6##BC015603|IFI6|2537|interferon, alpha-inducible protein 6##AK024814|IFI6|2537|interferon, alpha-inducible protein 6##AK314488|IFI6|2537|interferon, alpha-inducible protein 6##NM_002038|IFI6|2537|interferon, alpha-inducible protein 6##NM_022872|IFI6|2537|interferon, alpha-inducible protein 6##NM_022873|IFI6|2537|interferon, alpha-inducible protein 6	0.99992	CTCF.p2:27:1.000
chr11	108519134	108519249	reg1000362.p2	17.906	+	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	-54787	-	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	-149996	-	BC059411 BC029536 AK303096 NM_152587	-180949	-	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	16623	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	773652	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	773708	+	BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5##AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC029536|C11orf65|160140|chromosome 11 open reading frame 65##AK303096|C11orf65|160140|chromosome 11 open reading frame 65##NM_152587|C11orf65|160140|chromosome 11 open reading frame 65##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87	0.0	
chr16	19179086	19179236	reg1000333.p1	17.904	+	TSC_hg19_v1_chr16_+_19125253 AK096327 NM_001034841	-53913	+	TSC_hg19_v1_chr16_+_19079232 AL136647 NM_001190983 BC043272	-99896	+	AF098948 TSC_hg19_v1_chr16_+_19078967 AK225115 AB528110 AM393051 AM393521	-100189	+	TSC_hg19_v1_chr16_+_19179561 NM_016524 BC004518 AF220560 AB527504 CU678742	590	+	BC070101 NM_001105248 NM_001105249	242895	+	AY236494 NM_024780 BC038118 AK097718 BC027602 AK131202	288643	+	AK096327|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##NM_001034841|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##AL136647|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_001190983|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC043272|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AF098948|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK225115|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AM393051|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AM393521|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_016524|SYT17|51760|synaptotagmin XVII##BC004518|SYT17|51760|synaptotagmin XVII##AF220560|SYT17|51760|synaptotagmin XVII##BC070101|TMC5|79838|transmembrane channel-like 5##NM_001105248|TMC5|79838|transmembrane channel-like 5##NM_001105249|TMC5|79838|transmembrane channel-like 5##AY236494|TMC5|79838|transmembrane channel-like 5##NM_024780|TMC5|79838|transmembrane channel-like 5##BC038118|TMC5|79838|transmembrane channel-like 5##AK097718|TMC5|79838|transmembrane channel-like 5##BC027602|TMC5|79838|transmembrane channel-like 5##AK131202|TMC5|79838|transmembrane channel-like 5	0.080543	
chr6	37506049	37506155	reg1000242.p1	17.904	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-38406	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-38450	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-102665	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	159604	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	281188	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	281588	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.436943	CTCF.p2:-6:0.423
chr1	119910240	119910367	reg1000598.p1	17.903	+	TSC_hg19_v1_chr1_-_119683274 BC021722 CU692202 BC039889 AK223197 AJ242739 AK296799 BC044575 AK313740 AK300295 NM_015836 NM_201263	-227034	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	-227277	+	AK127536 NM_152380	-378125	-	TSC_hg19_v1_chr1_+_119911431 AK298289 NM_001005783 NM_016527 BC020863 AF231917 AF203975 AY513277	1141	+	NM_001166120	47250	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	47458	+	BC021722|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC039889|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK223197|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AJ242739|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK296799|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC044575|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK313740|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK300295|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_015836|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_201263|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15##AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)##BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2	0.90777	CTCF.p2:17:0.908
chr2	231476193	231476330	reg1000321.p2	17.891	+	AK091898 NM_001206704	-194791	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-195305	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-195342	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	101285	+	TSC_hg19_v1_chr2_+_231577633 BC020570	101383	+	AK292382 NM_001130849 NM_001130850 AK315692	102017	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.999512	CTCF.p2:6:1.000
chr5	38441944	38442072	reg1000654.p1	17.890	+	NM_182798 AK097549 BC031251	-38367	+	CU687828 TSC_hg19_v1_chr5_+_38258922	-183119	+	BX647551 TSC_hg19_v1_chr5_+_38258660 BC063822 AK291602	-183342	+	NM_182801 BC033177 AK092994 AX747843 BC033188	3616	+	TSC_hg19_v1_chr5_-_38556749 AK290059 NM_001127671	114720	-	AK308158 AK309882 NM_002310	153498	-	NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BX647551|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC063822|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK291602|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_182801|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033177|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK092994|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033188|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha##AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha##AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha	0.998454	CTCF.p2:-4:0.998
chr1	226821945	226822081	reg1000673.p1	17.888	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-85396	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-85512	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-226210	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	104925	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	236267	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	305933	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.999504	CTCF.p2:-12:1.000
chr1	52468087	52468198	reg1000383.p1	17.882	+	M28214 BC005035 TSC_hg19_v1_chr1_-_52456373 AK291653 NM_002867	-11779	-	TSC_hg19_v1_chr1_-_52344478 NM_001101662 NM_002525	-123622	-	TSC_hg19_v1_chr1_-_52344409 AK302616 AK312318 X93207 X93209	-123727	-	CU680254 DQ892239 DQ895439 BC012173 TSC_hg19_v1_chr1_-_52499463 AF327348 NM_138417 AK313746	31329	-	CU674738 BC008953 TSC_hg19_v1_chr1_-_52520864 AK075409 BC001493 BC008913 AY358982 AF131758	52686	-	AF543416 NM_015913	52904	-	M28214|RAB3B|5865|RAB3B, member RAS oncogene family##BC005035|RAB3B|5865|RAB3B, member RAS oncogene family##AK291653|RAB3B|5865|RAB3B, member RAS oncogene family##NM_002867|RAB3B|5865|RAB3B, member RAS oncogene family##NM_001101662|NRD1|4898|nardilysin (N-arginine dibasic convertase)##NM_002525|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AK302616|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AK312318|NRD1|4898|nardilysin (N-arginine dibasic convertase)##X93207|NRD1|4898|nardilysin (N-arginine dibasic convertase)##X93209|NRD1|4898|nardilysin (N-arginine dibasic convertase)##DQ892239|KTI12|112970|KTI12 homolog, chromatin associated (S. cerevisiae)##DQ895439|KTI12|112970|KTI12 homolog, chromatin associated (S. cerevisiae)##BC012173|KTI12|112970|KTI12 homolog, chromatin associated (S. cerevisiae)##AF327348|KTI12|112970|KTI12 homolog, chromatin associated (S. cerevisiae)##NM_138417|KTI12|112970|KTI12 homolog, chromatin associated (S. cerevisiae)##AK313746|KTI12|112970|KTI12 homolog, chromatin associated (S. cerevisiae)##BC008953|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)##AK075409|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)##BC001493|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)##BC008913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)##AY358982|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)##AF131758|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)##AF543416|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)##NM_015913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	0.0	
chr10	75645960	75646092	reg1000353.p1	17.880	+	AB590440 L07044 DQ892365 DQ895574 DQ896692 TSC_hg19_v1_chr10_-_75634275 U66064 AK131199 AK095576 BC034044 AK225771 AK291704 AK301180 NM_001204492 NM_001222 NM_172169 NM_172170 NM_172171 NM_172173	-11707	-	TSC_hg19_v1_chr10_-_75571579 BC018681 AK303648 NM_003635	-74461	-	BC035711 TSC_hg19_v1_chr10_-_75571357 BC052780	-74652	-	NM_001145031 NM_002658 TSC_hg19_v1_chr10_+_75670889 AK297940 AK298560 AK312960	24851	+	BC013575 K03226 M15476 D00244 TSC_hg19_v1_chr10_+_75670948 X02760	24915	+	AB208961 TSC_hg19_v1_chr10_+_75673428	27361	+	L07044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ892365|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ895574|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ896692|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##U66064|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK131199|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK095576|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##BC034044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK225771|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK291704|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK301180|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001204492|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001222|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172169|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172170|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172171|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172173|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##BC018681|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##AK303648|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##NM_003635|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##BC035711|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##NM_001145031|PLAU|5328|plasminogen activator, urokinase##NM_002658|PLAU|5328|plasminogen activator, urokinase##AK297940|PLAU|5328|plasminogen activator, urokinase##AK298560|PLAU|5328|plasminogen activator, urokinase##AK312960|PLAU|5328|plasminogen activator, urokinase##BC013575|PLAU|5328|plasminogen activator, urokinase##K03226|PLAU|5328|plasminogen activator, urokinase##M15476|PLAU|5328|plasminogen activator, urokinase##D00244|PLAU|5328|plasminogen activator, urokinase##X02760|PLAU|5328|plasminogen activator, urokinase##AB208961|PLAU|5328|plasminogen activator, urokinase	0.524875	CTCF.p2:-15:0.513
chr1	9349197	9349314	reg1000612.p1	17.877	+	CR749282 TSC_hg19_v1_chr1_+_9299950	-49317	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	-54338	+	TSC_hg19_v1_chr1_+_9294832 BC081559	-54440	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	3682	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	3714	+	TSC_hg19_v1_chr1_+_9415945 CU677397	66691	+	CR749282|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1	0.344104	CTCF.p2:-7:0.344
chr20	542477	542602	reg1000667.p1	17.876	+	TSC_hg19_v1_chr20_-_524377 DQ354583 BC011668 M55265 BC002615 J02853 S53149 BC050036 AK302583 AK312535 AY735339 NM_001895 NM_177559 NM_177560	-18131	-	TSC_hg19_v1_chr20_-_443178 AK095110 NM_144628 AK127062	-99324	-	TSC_hg19_v1_chr20_-_443161 BC014983 AK291648	-99389	-	NM_004609 U08336 TSC_hg19_v1_chr20_-_590953 BC067836	48399	-	BC017001 TSC_hg19_v1_chr20_-_633843 AM393140 AM393844 BC047707 BC032604 AK312054	91286	-	TSC_hg19_v1_chr20_-_633845 AK127435 AL833944 NM_080725	91327	-	DQ354583|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##BC011668|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##M55265|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##BC002615|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##J02853|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##S53149|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##BC050036|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AK302583|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AK312535|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AY735339|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_001895|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_177559|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_177560|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AK095110|TBC1D20|128637|TBC1 domain family, member 20##NM_144628|TBC1D20|128637|TBC1 domain family, member 20##AK127062|TBC1D20|128637|TBC1 domain family, member 20##BC014983|TBC1D20|128637|TBC1 domain family, member 20##AK291648|TBC1D20|128637|TBC1 domain family, member 20##NM_004609|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##U08336|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##BC067836|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##BC017001|SRXN1|140809|sulfiredoxin 1##AM393140|SRXN1|140809|sulfiredoxin 1##AM393844|SRXN1|140809|sulfiredoxin 1##BC047707|SRXN1|140809|sulfiredoxin 1##BC032604|SRXN1|140809|sulfiredoxin 1##AK312054|SRXN1|140809|sulfiredoxin 1##AK127435|SRXN1|140809|sulfiredoxin 1##AL833944|SRXN1|140809|sulfiredoxin 1##NM_080725|SRXN1|140809|sulfiredoxin 1	0.016399	
chr9	117776395	117776517	reg1000468.p1	17.876	+	AK313619 NM_001244 NM_001252290	-83582	-	AB590753 AK291642 BC074940 BC074941 BC069435 AK313721 BC104462 BC104463 NM_005118 AF520785	-208105	-	AY434464 NM_001204344	-221647	-	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	104017	-	AB022761 NM_017418	127640	+	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	1139614	+	AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##AK291642|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074940|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074941|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC069435|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313721|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104462|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104463|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_005118|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AF520785|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AY434464|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001204344|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1	0.998821	CTCF.p2:17:0.999
chr14	24058329	24058460	reg1000687.p1	17.874	+	BC055429 TSC_hg19_v1_chr14_-_24048004 AB058734 NM_001146028 NM_032452	-10394	-	TSC_hg19_v1_chr14_-_24047779 AK091572 AX747068	-10596	-	AK290511 TSC_hg19_v1_chr14_-_24047453	-10927	-	AK222857 NM_005794 NM_182908 AK309945 BC002786 U31875	47184	+	TSC_hg19_v1_chr14_-_24422882 BX247982	364482	-	TSC_hg19_v1_chr14_+_24422978 AY616182 DQ344810 NM_021004 AY358638 AF064256 AF044127 AK001870 AK308436 DQ325464 AK314448 AY071856 BC003019 AK301201 DQ338571	364633	+	BC055429|JPH4|84502|junctophilin 4##AB058734|JPH4|84502|junctophilin 4##NM_001146028|JPH4|84502|junctophilin 4##NM_032452|JPH4|84502|junctophilin 4##AK091572|JPH4|84502|junctophilin 4##AK290511|JPH4|84502|junctophilin 4##AK222857|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##NM_005794|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##NM_182908|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##AK309945|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##BC002786|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##U31875|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##BX247982|C14orf167|55449|chromosome 14 open reading frame 167##AY616182|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ344810|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##NM_021004|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY358638|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF064256|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF044127|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK001870|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK308436|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ325464|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK314448|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY071856|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##BC003019|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ338571|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4	0.959762	CTCF.p2:-20:0.960
chr16	57610396	57610540	reg1000922.p1	17.869	+	TSC_hg19_v1_chr16_+_57576577 BC032401 NM_153837	-33880	+	TSC_hg19_v1_chr16_+_57576554 AK303661 AK292783 AK160368 AY358447 AK301357	-33914	+	BC008285 BC009941 NM_033212	-40003	-	AK131550 TSC_hg19_v1_chr16_+_57653651 CR936747	43187	+	NM_001145770 NM_005682 AK075270 AY358400	43480	+	AK312405 NM_001145771 NM_001145772 NM_001145773 NM_201524 NM_201525 TSC_hg19_v1_chr16_+_57662543 AK075555 AK299110	51986	+	BC032401|GPR114|221188|G protein-coupled receptor 114##NM_153837|GPR114|221188|G protein-coupled receptor 114##AK303661|GPR114|221188|G protein-coupled receptor 114##AK292783|GPR114|221188|G protein-coupled receptor 114##AK160368|GPR114|221188|G protein-coupled receptor 114##AY358447|GPR114|221188|G protein-coupled receptor 114##AK301357|GPR114|221188|G protein-coupled receptor 114##BC008285|CCDC102A|92922|coiled-coil domain containing 102A##BC009941|CCDC102A|92922|coiled-coil domain containing 102A##NM_033212|CCDC102A|92922|coiled-coil domain containing 102A##AK131550|GPR56|9289|G protein-coupled receptor 56##CR936747|GPR56|9289|G protein-coupled receptor 56##NM_001145770|GPR56|9289|G protein-coupled receptor 56##NM_005682|GPR56|9289|G protein-coupled receptor 56##AK075270|GPR56|9289|G protein-coupled receptor 56##AY358400|GPR56|9289|G protein-coupled receptor 56##AK312405|GPR56|9289|G protein-coupled receptor 56##NM_001145771|GPR56|9289|G protein-coupled receptor 56##NM_001145772|GPR56|9289|G protein-coupled receptor 56##NM_001145773|GPR56|9289|G protein-coupled receptor 56##NM_201524|GPR56|9289|G protein-coupled receptor 56##NM_201525|GPR56|9289|G protein-coupled receptor 56##AK075555|GPR56|9289|G protein-coupled receptor 56##AK299110|GPR56|9289|G protein-coupled receptor 56	0.379092	CTCF.p2:1:0.379
chr6	42012061	42012186	reg1000448.p2	17.866	+	AB385206 CR542246 DQ891748 DQ895130 BC011616 M90814 TSC_hg19_v1_chr6_-_41909544 AK315421 AK299187 M92287 NM_001136125 NM_001760	-102624	-	TSC_hg19_v1_chr6_+_41889236 CU690756	-122856	+	TSC_hg19_v1_chr6_+_41889209 AK314147 BC007340	-122914	+	TSC_hg19_v1_chr6_-_42016453 AK303452 AB209825 AK057206 AK097856	4295	-	NM_001136017 NM_001136126	4486	-	BC033728 NM_138572 TSC_hg19_v1_chr6_+_42018261 AK057383 BC119678 BC119679 AL833401	6133	+	CR542246|CCND3|896|cyclin D3##DQ891748|CCND3|896|cyclin D3##DQ895130|CCND3|896|cyclin D3##BC011616|CCND3|896|cyclin D3##M90814|CCND3|896|cyclin D3##AK315421|CCND3|896|cyclin D3##AK299187|CCND3|896|cyclin D3##M92287|CCND3|896|cyclin D3##NM_001136125|CCND3|896|cyclin D3##NM_001760|CCND3|896|cyclin D3##AK314147|BYSL|705|bystin-like##BC007340|BYSL|705|bystin-like##AK303452|CCND3|896|cyclin D3##AB209825|CCND3|896|cyclin D3##AK057206|CCND3|896|cyclin D3##AK097856|CCND3|896|cyclin D3##NM_001136017|CCND3|896|cyclin D3##NM_001136126|CCND3|896|cyclin D3##BC033728|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##NM_138572|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AK057383|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119678|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119679|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AL833401|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa	0.993462	CTCF.p2:12:0.993
chr17	45967410	45967530	reg1000734.p1	17.857	+	BC103951 BC103952 BC103953 BC103954 AK127850 NM_199262	-34282	-	TSC_hg19_v1_chr17_-_45928530 AK127707	-38926	-	TSC_hg19_v1_chr17_-_45918640 BC002980 AK303835 NM_001145023 NM_138355	-48801	-	TSC_hg19_v1_chr17_-_45973143 AK127217	5680	-	NM_003110 TSC_hg19_v1_chr17_+_45973601 BC005914 BC016680 BC033814	6110	+	NM_018129 TSC_hg19_v1_chr17_+_46018965 AK001397 AK303665 AK303792 AK223242 AK303536 BC006525	51474	+	BC103951|SP6|80320|Sp6 transcription factor##BC103952|SP6|80320|Sp6 transcription factor##BC103953|SP6|80320|Sp6 transcription factor##BC103954|SP6|80320|Sp6 transcription factor##AK127850|SP6|80320|Sp6 transcription factor##NM_199262|SP6|80320|Sp6 transcription factor##AK127707|SP6|80320|Sp6 transcription factor##BC002980|SCRN2|90507|secernin 2##AK303835|SCRN2|90507|secernin 2##NM_001145023|SCRN2|90507|secernin 2##NM_138355|SCRN2|90507|secernin 2##NM_003110|SP2|6668|Sp2 transcription factor##BC005914|SP2|6668|Sp2 transcription factor##BC016680|SP2|6668|Sp2 transcription factor##BC033814|SP2|6668|Sp2 transcription factor##NM_018129|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK001397|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK303665|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK303792|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK223242|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK303536|PNPO|55163|pyridoxamine 5'-phosphate oxidase##BC006525|PNPO|55163|pyridoxamine 5'-phosphate oxidase	0.999647	CTCF.p2:11:1.000
chr10	118976265	118976377	reg1000352.p1	17.845	+	AB087138 AB464053 NM_181840	-19322	+	AK127095 NM_001112704 NM_199131	-78510	-	NM_001127211 NM_018330 TSC_hg19_v1_chr10_-_118765131 AK091381 AX746947	-211209	-	NM_003054 BC030593 TSC_hg19_v1_chr10_+_119000626 AK314997 L23205 L09118 X71354 L14269 BC108927 BC108928	24329	+	CU688476 TSC_hg19_v1_chr10_-_119134939 BC012186 BC028375 NM_173791 AK091746 AX747159 BC033019	158560	-	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	325595	-	AB087138|KCNK18|338567|potassium channel, subfamily K, member 18##NM_181840|KCNK18|338567|potassium channel, subfamily K, member 18##AK127095|VAX1|11023|ventral anterior homeobox 1##NM_001112704|VAX1|11023|ventral anterior homeobox 1##NM_199131|VAX1|11023|ventral anterior homeobox 1##NM_001127211|KIAA1598|57698|KIAA1598##NM_018330|KIAA1598|57698|KIAA1598##AK091381|KIAA1598|57698|KIAA1598##NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC012186|PDZD8|118987|PDZ domain containing 8##BC028375|PDZD8|118987|PDZ domain containing 8##NM_173791|PDZD8|118987|PDZ domain containing 8##AK091746|PDZD8|118987|PDZ domain containing 8##BC033019|PDZD8|118987|PDZ domain containing 8##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)	1.921233	CTCF.p2:10:0.903	CTCF.p2:-33:0.999
chr3	15309566	15309704	reg1000785.p1	17.844	+	TSC_hg19_v1_chr3_+_15247768 AB028639 BC056202 AK314253 CU691130	-61681	+	TSC_hg19_v1_chr3_+_15247736 NM_014296	-61901	+	TSC_hg19_v1_chr3_-_15140655 AK291288 AK301735 AL833545 NM_022340	-168982	-	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	64306	-	TSC_hg19_v1_chr3_-_15374094 AL117422 AK313167 NM_004844	64462	-	BC006169 NM_001018009	73252	-	AB028639|CAPN7|23473|calpain 7##BC056202|CAPN7|23473|calpain 7##AK314253|CAPN7|23473|calpain 7##NM_014296|CAPN7|23473|calpain 7##AK291288|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AK301735|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AL833545|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_022340|ZFYVE20|64145|zinc finger, FYVE domain containing 20##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AL117422|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AK313167|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_004844|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC006169|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_001018009|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	0.995669	CTCF.p2:-7:0.996
chr19	18049184	18049311	reg1000777.p1	17.841	+	BC013949 NM_138442	-3343	+	TSC_hg19_v1_chr19_+_18043824 NM_001136203	-5423	+	BX648217 NM_000453 U66088 D87920	-66417	+	NM_002248 U69883	12863	+	TSC_hg19_v1_chr19_+_18111932 NM_001025604 AK127940	62703	+	TSC_hg19_v1_chr19_+_18118978 AF193051 NM_015683 AK000689 AK128588 BC022516 AK314657 AB529119	69771	+	BC013949|CCDC124|115098|coiled-coil domain containing 124##NM_138442|CCDC124|115098|coiled-coil domain containing 124##NM_001136203|CCDC124|115098|coiled-coil domain containing 124##BX648217|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##NM_000453|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##U66088|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##D87920|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##NM_001025604|ARRDC2|27106|arrestin domain containing 2##AK127940|ARRDC2|27106|arrestin domain containing 2##AF193051|ARRDC2|27106|arrestin domain containing 2##NM_015683|ARRDC2|27106|arrestin domain containing 2##AK000689|ARRDC2|27106|arrestin domain containing 2##AK128588|ARRDC2|27106|arrestin domain containing 2##BC022516|ARRDC2|27106|arrestin domain containing 2##AK314657|ARRDC2|27106|arrestin domain containing 2	0.995431	CTCF.p2:-7:0.995
chr11	129234160	129234278	reg1000573.p1	17.840	+	EF127492 NM_001142685	-172127	-	AB018255 AY194287 TSC_hg19_v1_chr11_-_128894084 AB079856 NM_014715	-340158	-	NM_001195195 NM_001251964 NM_022112	-420926	-	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	11662	+	TSC_hg19_v1_chr11_+_129685744 AK098106 NM_138788 AK290283 AK292058	451525	+	NM_006165 X80878	528684	-	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##AB018255|ARHGAP32|9743|Rho GTPase activating protein 32##AY194287|ARHGAP32|9743|Rho GTPase activating protein 32##AB079856|ARHGAP32|9743|Rho GTPase activating protein 32##NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001195195|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001251964|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_022112|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2##AK098106|TMEM45B|120224|transmembrane protein 45B##NM_138788|TMEM45B|120224|transmembrane protein 45B##AK290283|TMEM45B|120224|transmembrane protein 45B##AK292058|TMEM45B|120224|transmembrane protein 45B##NM_006165|NFRKB|4798|nuclear factor related to kappaB binding protein##X80878|NFRKB|4798|nuclear factor related to kappaB binding protein	0.994382	CTCF.p2:8:0.994
chr11	63604825	63604957	reg1000111.p1	17.836	+	TSC_hg19_v1_chr11_+_63581031 BC002782 BC007540 CU691150	-23797	+	BC056402 NM_138471 TSC_hg19_v1_chr11_+_63580927	-23946	+	NM_001144936 TSC_hg19_v1_chr11_-_63536248	-68695	-	TSC_hg19_v1_chr11_+_63606486 AB188493 NM_001039469 NM_001163296 NM_001163297 NM_004954	1535	+	TSC_hg19_v1_chr11_+_63606564 AK225766	1658	+	TSC_hg19_v1_chr11_+_63606599 AK307858	1713	+	BC002782|C11orf84|144097|chromosome 11 open reading frame 84##BC007540|C11orf84|144097|chromosome 11 open reading frame 84##BC056402|C11orf84|144097|chromosome 11 open reading frame 84##NM_138471|C11orf84|144097|chromosome 11 open reading frame 84##NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95##AB188493|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_001039469|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_001163296|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_001163297|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_004954|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK225766|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK307858|MARK2|2011|MAP/microtubule affinity-regulating kinase 2	0.99765	CTCF.p2:-13:0.998
chr3	49709259	49709366	reg1000391.p1	17.835	+	TSC_hg19_v1_chr3_+_49591913 AF052224 NM_003458	-117396	+	AK297802 TSC_hg19_v1_chr3_+_49568448	-140903	+	TSC_hg19_v1_chr3_+_49547870 DQ893491 DQ896435	-161395	+	BC000362 BC001499 BC001826 NM_001640	2122	+	TSC_hg19_v1_chr3_+_49711791 AK314962	2463	+	D38441 TSC_hg19_v1_chr3_+_49711819 AF141383 J03068 S90797	2572	+	AF052224|BSN|8927|bassoon (presynaptic cytomatrix protein)##NM_003458|BSN|8927|bassoon (presynaptic cytomatrix protein)##AK297802|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##DQ893491|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##DQ896435|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##BC000362|APEH|327|N-acylaminoacyl-peptide hydrolase##BC001499|APEH|327|N-acylaminoacyl-peptide hydrolase##BC001826|APEH|327|N-acylaminoacyl-peptide hydrolase##NM_001640|APEH|327|N-acylaminoacyl-peptide hydrolase##AK314962|APEH|327|N-acylaminoacyl-peptide hydrolase##D38441|APEH|327|N-acylaminoacyl-peptide hydrolase##AF141383|APEH|327|N-acylaminoacyl-peptide hydrolase	0.860644	CTCF.p2:5:0.861
chr1	33833481	33833613	reg1000682.p1	17.831	+	NM_004427 TSC_hg19_v1_chr1_-_33815501 U89278	-18039	-	AK128821 TSC_hg19_v1_chr1_-_33815496 BC028396 BC018602	-18094	-	BC029269 TSC_hg19_v1_chr1_-_33815374 BC068573 BC092492 BC110863	-18178	-	AB527842 AJ419231 BC130630 BC144121 NM_198040	7620	-	TSC_hg19_v1_chr1_-_33896604 AJ242730	63061	-	NM_145238 AK131405 TSC_hg19_v1_chr1_+_33938251 AK290195 BC008827 BC011404	104704	+	NM_004427|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##U89278|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AK128821|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC028396|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC018602|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC029269|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC068573|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC092492|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC110863|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AJ419231|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC130630|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC144121|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##NM_198040|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AJ242730|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##NM_145238|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK131405|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK290195|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC008827|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC011404|ZSCAN20|7579|zinc finger and SCAN domain containing 20	0.999804	CTCF.p2:4:1.000
chr15	90863379	90863507	reg1000235.p1	17.828	+	TSC_hg19_v1_chr15_+_90808921 AB029315 NM_001033088 AL834503 BC007222 AL360142 AK312641 BC017192 BC019023 AF242770 AL355700 BC009389 BC096824 AF225423	-54523	+	TSC_hg19_v1_chr15_+_90792763 BC036668 NM_001029964 AK127965 BC052201	-70668	+	TSC_hg19_v1_chr15_+_90777469 BC127821 NM_001013657	-85969	+	AK289385 NM_001004309 BC067279 CR749343	32080	+	BC151834 D29640 TSC_hg19_v1_chr15_+_90931449	68011	+	TSC_hg19_v1_chr15_+_90931479 NM_003870	68034	+	AB029315|NGRN|51335|neugrin, neurite outgrowth associated##NM_001033088|NGRN|51335|neugrin, neurite outgrowth associated##AL834503|NGRN|51335|neugrin, neurite outgrowth associated##BC007222|NGRN|51335|neugrin, neurite outgrowth associated##AL360142|NGRN|51335|neugrin, neurite outgrowth associated##AK312641|NGRN|51335|neugrin, neurite outgrowth associated##BC017192|NGRN|51335|neugrin, neurite outgrowth associated##BC019023|NGRN|51335|neugrin, neurite outgrowth associated##AF242770|NGRN|51335|neugrin, neurite outgrowth associated##AL355700|NGRN|51335|neugrin, neurite outgrowth associated##BC009389|NGRN|51335|neugrin, neurite outgrowth associated##BC096824|NGRN|51335|neugrin, neurite outgrowth associated##AF225423|NGRN|51335|neugrin, neurite outgrowth associated##BC036668|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##NM_001029964|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##AK127965|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##BC127821|C15orf58|390637|chromosome 15 open reading frame 58##NM_001013657|C15orf58|390637|chromosome 15 open reading frame 58##AK289385|ZNF774|342132|zinc finger protein 774##NM_001004309|ZNF774|342132|zinc finger protein 774##BC067279|ZNF774|342132|zinc finger protein 774##CR749343|ZNF774|342132|zinc finger protein 774##BC151834|IQGAP1|8826|IQ motif containing GTPase activating protein 1##D29640|IQGAP1|8826|IQ motif containing GTPase activating protein 1##NM_003870|IQGAP1|8826|IQ motif containing GTPase activating protein 1	0.880234	CTCF.p2:-9:0.880
chr1	119829371	119829514	reg1000451.p1	17.825	+	TSC_hg19_v1_chr1_-_119683274 BC021722 CU692202 BC039889 AK223197 AJ242739 AK296799 BC044575 AK313740 AK300295 NM_015836 NM_201263	-146173	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	-146416	+	AK127536 NM_152380	-297264	-	TSC_hg19_v1_chr1_+_119911431 AK298289 NM_001005783 NM_016527 BC020863 AF231917 AF203975 AY513277	82002	+	NM_001166120	128111	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	128319	+	BC021722|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC039889|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK223197|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AJ242739|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK296799|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC044575|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK313740|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK300295|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_015836|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_201263|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15##AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)##BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2	0.942651	CTCF.p2:-19:0.943
chr7	76145364	76145491	reg1000707.p1	17.825	+	NM_030570 NM_182684 AK290096 AY233462 BC004304 AK056760 CU678662	-5571	+	AY225124 AY225125 CU679151 DQ893264 DQ896593 NM_001102596	-35601	+	NM_001102594 NM_001102595 NM_020892 BC018555 DQ010329 AK293226 TSC_hg19_v1_chr7_+_76091025 AK023924 AB040961 BC008856 BC026059 BC093079	-54400	+	TSC_hg19_v1_chr7_+_76178647 BC090058	33205	+	TSC_hg19_v1_chr7_+_76178675 BC078169	33248	+	TSC_hg19_v1_chr7_-_76256148 BC017101	110776	-	NM_030570|UPK3B|80761|uroplakin 3B##NM_182684|UPK3B|80761|uroplakin 3B##AK290096|UPK3B|80761|uroplakin 3B##AY233462|UPK3B|80761|uroplakin 3B##BC004304|UPK3B|80761|uroplakin 3B##AK056760|UPK3B|80761|uroplakin 3B##AY225124|DTX2|113878|deltex homolog 2 (Drosophila)##AY225125|DTX2|113878|deltex homolog 2 (Drosophila)##DQ893264|DTX2|113878|deltex homolog 2 (Drosophila)##DQ896593|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102596|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102594|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102595|DTX2|113878|deltex homolog 2 (Drosophila)##NM_020892|DTX2|113878|deltex homolog 2 (Drosophila)##BC018555|DTX2|113878|deltex homolog 2 (Drosophila)##DQ010329|DTX2|113878|deltex homolog 2 (Drosophila)##AK293226|DTX2|113878|deltex homolog 2 (Drosophila)##AK023924|DTX2|113878|deltex homolog 2 (Drosophila)##AB040961|DTX2|113878|deltex homolog 2 (Drosophila)##BC008856|DTX2|113878|deltex homolog 2 (Drosophila)##BC026059|DTX2|113878|deltex homolog 2 (Drosophila)##BC093079|DTX2|113878|deltex homolog 2 (Drosophila)##BC090058|LOC100133091|100133091|uncharacterized LOC100133091##BC078169|LOC100133091|100133091|uncharacterized LOC100133091##BC017101|POMZP3|22932|POM121 and ZP3 fusion	0.057286	
chr17	36505141	36505251	reg1000579.p1	17.822	+	AY584611 NM_001004334	-5504	-	TSC_hg19_v1_chr17_+_36453138 AK172741 AK225031 HQ258365 BC006235	-52059	+	NM_032351 AK293605 BC130382 BC130384 TSC_hg19_v1_chr17_+_36453120	-52142	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	2667	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	79509	+	TSC_hg19_v1_chr17_-_36729122 AK295027	223926	-	AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##AK172741|MRPL45|84311|mitochondrial ribosomal protein L45##AK225031|MRPL45|84311|mitochondrial ribosomal protein L45##HQ258365|MRPL45|84311|mitochondrial ribosomal protein L45##BC006235|MRPL45|84311|mitochondrial ribosomal protein L45##NM_032351|MRPL45|84311|mitochondrial ribosomal protein L45##AK293605|MRPL45|84311|mitochondrial ribosomal protein L45##BC130382|MRPL45|84311|mitochondrial ribosomal protein L45##BC130384|MRPL45|84311|mitochondrial ribosomal protein L45##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1	0.981055	CTCF.p2:-4:0.981
chr3	58159666	58159785	reg1000629.p1	17.819	+	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	-165578	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-416523	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-480986	-	NM_004944	40672	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	63558	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	63805	+	AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6	0.561035	CTCF.p2:-34:0.481
chr4	148788065	148788192	reg1000344.p2	17.817	+	AB050785 BC128055 NM_024605 BC126899 BC109029 BC109030	-134671	+	TSC_hg19_v1_chr4_+_148653238 AK123785	-134877	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	-182864	-	TSC_hg19_v1_chr4_-_149357955 AB587357	569854	-	TSC_hg19_v1_chr4_-_149363305 BC111758	575211	-	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	575456	-	AB050785|ARHGAP10|79658|Rho GTPase activating protein 10##BC128055|ARHGAP10|79658|Rho GTPase activating protein 10##NM_024605|ARHGAP10|79658|Rho GTPase activating protein 10##BC126899|ARHGAP10|79658|Rho GTPase activating protein 10##BC109029|ARHGAP10|79658|Rho GTPase activating protein 10##BC109030|ARHGAP10|79658|Rho GTPase activating protein 10##AK123785|ARHGAP10|79658|Rho GTPase activating protein 10##BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	1.970846	CTCF.p2:-25:1.000	CTCF.p2:40:0.971
chr14	64761673	64761814	reg1000436.p3	17.810	+	AF051427 AF051428 AF060555 NM_001040275 NM_001437	-641	-	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	-12080	-	NM_182910	-79072	+	NM_001040276 BX247957 TSC_hg19_v1_chr14_-_64805347	43615	-	AK302747 NM_005956	93010	+	TSC_hg19_v1_chr14_+_64855070 AK095514 AK312361 BC050420 AK309266 BC009806 J04031 AB384767 DQ893634 DQ896853	93353	+	AF051427|ESR2|2100|estrogen receptor 2 (ER beta)##AF051428|ESR2|2100|estrogen receptor 2 (ER beta)##AF060555|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001040275|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001437|ESR2|2100|estrogen receptor 2 (ER beta)##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_001040276|ESR2|2100|estrogen receptor 2 (ER beta)##BX247957|ESR2|2100|estrogen receptor 2 (ER beta)##AK302747|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_005956|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK312361|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC050420|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK309266|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC009806|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##J04031|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ893634|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ896853|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase	0.99934	CTCF.p2:7:0.999
chr20	48802900	48803039	reg1000773.p1	17.808	+	TSC_hg19_v1_chr20_-_48770302 BC144612 NM_001162505 NM_199129 NM_199203	-32651	-	TSC_hg19_v1_chr20_-_48770261 AK023028 AF155120	-32693	-	TSC_hg19_v1_chr20_-_48770251 AB044550 BC018893 BC142966	-32730	-	NM_005194 TSC_hg19_v1_chr20_+_48807197	4224	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	4412	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	4661	+	BC144612|TMEM189|387521|transmembrane protein 189##NM_001162505|TMEM189|387521|transmembrane protein 189##NM_199129|TMEM189|387521|transmembrane protein 189##NM_199203|TMEM189-UBE2V1|387522|TMEM189-UBE2V1 readthrough##AK023028|TMEM189|387521|transmembrane protein 189##AF155120|TMEM189|387521|transmembrane protein 189##AB044550|TMEM189|387521|transmembrane protein 189##BC018893|TMEM189|387521|transmembrane protein 189##BC142966|TMEM189|387521|transmembrane protein 189##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta	0.992922	CTCF.p2:-9:0.993
chr19	36184802	36184930	reg1000489.p1	17.806	+	BC107097 BC107098 NM_007000 AF085807	-27150	+	TSC_hg19_v1_chr19_+_36139253 D28426 BC002478 X54473 X13923	-45614	+	TSC_hg19_v1_chr19_+_36139222 AK312140	-45642	+	AF130255 NM_014383	18963	+	TSC_hg19_v1_chr19_+_36208923 AJ007041 NM_014727	24064	+	TSC_hg19_v1_chr19_+_36209125 AF186605	24320	+	BC107097|UPK1A|11045|uroplakin 1A##BC107098|UPK1A|11045|uroplakin 1A##NM_007000|UPK1A|11045|uroplakin 1A##AF085807|UPK1A|11045|uroplakin 1A##D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##AK312140|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##AF130255|ZBTB32|27033|zinc finger and BTB domain containing 32##NM_014383|ZBTB32|27033|zinc finger and BTB domain containing 32##AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##AF186605|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4	1.534781	CTCF.p2:37:0.862	CTCF.p2:-48:0.673
chr22	29641631	29641758	reg1000746.p1	17.806	+	TSC_hg19_v1_chr22_+_29601914 BC046358 NM_133455 CR456407 CU012965 CU013253 AB463024 AJ416090	-39802	+	TSC_hg19_v1_chr22_+_29469035 BC063787 NM_001039570 NM_032045 AK056425 AB059618	-172672	+	CR456405 BC074758 BC126262 BC126264 AL035364 NM_015370	-183845	-	TSC_hg19_v1_chr22_-_29663824 AL050346 NM_012265	22174	-	NM_001163285 NM_001163286 NM_001163287 NM_005243 NM_013986 TSC_hg19_v1_chr22_+_29664088	22353	+	TSC_hg19_v1_chr22_+_29664281 X66899 BC000527 AK127624 CR456490 AK225102 AK056309 BC004817 AK056681 AK225096 BC072442 AF254086 BC011048 AB463036 AF327066 CU013087 CU013375 CU679880 CU687234 EU487217	22583	+	BC046358|EMID1|129080|EMI domain containing 1##NM_133455|EMID1|129080|EMI domain containing 1##CR456407|EMID1|129080|EMI domain containing 1##CU012965|EMID1|129080|EMI domain containing 1##CU013253|EMID1|129080|EMI domain containing 1##AJ416090|EMID1|129080|EMI domain containing 1##BC063787|KREMEN1|83999|kringle containing transmembrane protein 1##NM_001039570|KREMEN1|83999|kringle containing transmembrane protein 1##NM_032045|KREMEN1|83999|kringle containing transmembrane protein 1##AK056425|KREMEN1|83999|kringle containing transmembrane protein 1##AB059618|KREMEN1|83999|kringle containing transmembrane protein 1##CR456405|C22orf31|25770|chromosome 22 open reading frame 31##BC074758|C22orf31|25770|chromosome 22 open reading frame 31##BC126262|C22orf31|25770|chromosome 22 open reading frame 31##BC126264|C22orf31|25770|chromosome 22 open reading frame 31##AL035364|C22orf31|25770|chromosome 22 open reading frame 31##NM_015370|C22orf31|25770|chromosome 22 open reading frame 31##AL050346|RHBDD3|25807|rhomboid domain containing 3##NM_012265|RHBDD3|25807|rhomboid domain containing 3##NM_001163285|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163286|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163287|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_005243|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_013986|EWSR1|2130|Ewing sarcoma breakpoint region 1##X66899|EWSR1|2130|Ewing sarcoma breakpoint region 1##BC000527|EWSR1|2130|Ewing sarcoma breakpoint region 1##AK127624|EWSR1|2130|Ewing sarcoma breakpoint region 1##CR456490|EWSR1|2130|Ewing sarcoma breakpoint region 1##AK225102|EWSR1|2130|Ewing sarcoma breakpoint region 1##AK056309|EWSR1|2130|Ewing sarcoma breakpoint region 1##BC004817|EWSR1|2130|Ewing sarcoma breakpoint region 1##AK056681|EWSR1|2130|Ewing sarcoma breakpoint region 1##AK225096|EWSR1|2130|Ewing sarcoma breakpoint region 1##BC072442|EWSR1|2130|Ewing sarcoma breakpoint region 1##BC011048|EWSR1|2130|Ewing sarcoma breakpoint region 1##AF327066|EWSR1|2130|Ewing sarcoma breakpoint region 1##CU013087|EWSR1|2130|Ewing sarcoma breakpoint region 1##CU013375|EWSR1|2130|Ewing sarcoma breakpoint region 1	0.994628	CTCF.p2:13:0.995
chr7_gl000195_random	73	148	reg1000418.p1	17.806	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr1	9170944	9171081	reg1000781.p1	17.804	+	TSC_hg19_v1_chr1_-_9129695 M55531 AK290398 AK294368 NM_001135585 NM_003039	-41236	-	TSC_hg19_v1_chr1_-_9129644 AK289849 BC001692 BC001820 AK295785 BC035878	-41371	-	TSC_hg19_v1_chr1_-_9129605 DQ892291 DQ895491 CU674838 AK300091	-41413	-	DQ892804 DQ896051 TSC_hg19_v1_chr1_-_9189169 AK022194 AK292888 AK304154 AY768808 NM_024980 BC094733 BC018691	18209	-	TSC_hg19_v1_chr1_+_9294832 BC081559	123803	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	123905	+	M55531|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK290398|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK294368|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_001135585|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_003039|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK289849|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001692|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001820|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK295785|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC035878|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892291|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ895491|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK300091|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892804|GPR157|80045|G protein-coupled receptor 157##DQ896051|GPR157|80045|G protein-coupled receptor 157##AK022194|GPR157|80045|G protein-coupled receptor 157##AK292888|GPR157|80045|G protein-coupled receptor 157##AK304154|GPR157|80045|G protein-coupled receptor 157##AY768808|GPR157|80045|G protein-coupled receptor 157##NM_024980|GPR157|80045|G protein-coupled receptor 157##BC018691|GPR157|80045|G protein-coupled receptor 157##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	0.998748	CTCF.p2:-16:0.999
chr1	245319879	245319964	reg1004597.p2	17.803	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-1613	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-186238	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-186291	+	AK024733 NM_022743	1260790	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	1350633	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	1350687	-	AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3	0.064979	
chr16	87905283	87905402	reg1000350.p1	17.803	+	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	-2267	-	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	-105772	-	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	-105827	-	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	64805	-	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	79826	+	AK315535 NM_001173542	88134	+	DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##BC001044|KLHDC4|54758|kelch domain containing 4##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein	0.958237	CTCF.p2:20:0.958
chr6	35551732	35551855	reg1000589.p1	17.803	+	CU689498 EU446712 BC065261 NM_003322 BC032714 BC001761 BC021268 AB593124 AB593123 DQ426893	-71119	-	BC010053 BC027877 BC091488 AF142482 TSC_hg19_v1_chr6_-_35464854 NM_003214	-86981	-	AB082926 BC006791 U12404 TSC_hg19_v1_chr6_+_35436204 BC011366	-115590	+	TSC_hg19_v1_chr6_-_35656616 HM245391 AB209893	104827	-	TSC_hg19_v1_chr6_-_35656693 BC111050 AK222807 AK302704 AK303356 AK312422 BX647390 NM_001145776 AF194172 U71321 NM_001145777 NM_004117	104913	-	BC042605 NM_001145775	144566	-	EU446712|TULP1|7287|tubby like protein 1##BC065261|TULP1|7287|tubby like protein 1##NM_003322|TULP1|7287|tubby like protein 1##BC032714|TULP1|7287|tubby like protein 1##AB593124|TULP1|7287|tubby like protein 1##AB593123|TULP1|7287|tubby like protein 1##DQ426893|TULP1|7287|tubby like protein 1##BC010053|TEAD3|7005|TEA domain family member 3##BC027877|TEAD3|7005|TEA domain family member 3##BC091488|TEAD3|7005|TEA domain family member 3##AF142482|TEAD3|7005|TEA domain family member 3##NM_003214|TEAD3|7005|TEA domain family member 3##AB082926|RPL10A|4736|ribosomal protein L10a##BC006791|RPL10A|4736|ribosomal protein L10a##U12404|RPL10A|4736|ribosomal protein L10a##BC011366|RPL10A|4736|ribosomal protein L10a##HM245391|FKBP5|2289|FK506 binding protein 5##AB209893|FKBP5|2289|FK506 binding protein 5##BC111050|FKBP5|2289|FK506 binding protein 5##AK222807|FKBP5|2289|FK506 binding protein 5##AK302704|FKBP5|2289|FK506 binding protein 5##AK303356|FKBP5|2289|FK506 binding protein 5##AK312422|FKBP5|2289|FK506 binding protein 5##BX647390|FKBP5|2289|FK506 binding protein 5##NM_001145776|FKBP5|2289|FK506 binding protein 5##AF194172|FKBP5|2289|FK506 binding protein 5##U71321|FKBP5|2289|FK506 binding protein 5##NM_001145777|FKBP5|2289|FK506 binding protein 5##NM_004117|FKBP5|2289|FK506 binding protein 5##BC042605|FKBP5|2289|FK506 binding protein 5##NM_001145775|FKBP5|2289|FK506 binding protein 5	0.202618	CTCF.p2:-18:0.203
chr4	94685900	94686024	reg1000544.p1	17.799	+	AB209318 NM_001510 AK308611	-1460370	+	BC051694 NM_207491	-3529781	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-3637244	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	64099	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	442849	+	TSC_hg19_v1_chr4_+_95129015 NM_001128429 NM_020159 BC045534 AY008271 BC041800	443152	+	AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.999006	CTCF.p2:17:0.999
chr17	48374853	48374975	reg1000739.p1	17.793	+	NM_153229 AK090637 AX746552 BC064507	-23091	+	AY358204 NM_001168215	-26148	+	TSC_hg19_v1_chr17_-_48278993 BC036531 Z74615 NM_000088	-95921	-	TSC_hg19_v1_chr17_+_48423495 AJ277442 NM_022167 BC052262 AK299999 BC036069 AY358090	48552	+	BC001066 AB049647 TSC_hg19_v1_chr17_-_48450546 AK023576 BC021986 AF151084 AK315758 NM_016504	75632	-	TSC_hg19_v1_chr17_+_48450609 NM_001166131 NM_152463 AK055926 AK308275	75682	+	NM_153229|TMEM92|162461|transmembrane protein 92##AK090637|TMEM92|162461|transmembrane protein 92##BC064507|TMEM92|162461|transmembrane protein 92##AY358204|TMEM92|162461|transmembrane protein 92##NM_001168215|TMEM92|162461|transmembrane protein 92##BC036531|COL1A1|1277|collagen, type I, alpha 1##Z74615|COL1A1|1277|collagen, type I, alpha 1##NM_000088|COL1A1|1277|collagen, type I, alpha 1##AJ277442|XYLT2|64132|xylosyltransferase II##NM_022167|XYLT2|64132|xylosyltransferase II##BC052262|XYLT2|64132|xylosyltransferase II##AK299999|XYLT2|64132|xylosyltransferase II##BC036069|XYLT2|64132|xylosyltransferase II##AY358090|XYLT2|64132|xylosyltransferase II##BC001066|MRPL27|51264|mitochondrial ribosomal protein L27##AB049647|MRPL27|51264|mitochondrial ribosomal protein L27##AK023576|MRPL27|51264|mitochondrial ribosomal protein L27##BC021986|MRPL27|51264|mitochondrial ribosomal protein L27##AF151084|MRPL27|51264|mitochondrial ribosomal protein L27##AK315758|MRPL27|51264|mitochondrial ribosomal protein L27##NM_016504|MRPL27|51264|mitochondrial ribosomal protein L27##NM_001166131|EME1|146956|essential meiotic endonuclease 1 homolog 1 (S. pombe)##NM_152463|EME1|146956|essential meiotic endonuclease 1 homolog 1 (S. pombe)##AK055926|EME1|146956|essential meiotic endonuclease 1 homolog 1 (S. pombe)##AK308275|EME1|146956|essential meiotic endonuclease 1 homolog 1 (S. pombe)	0.043371	
chrX	10087593	10087689	reg1000071.p1	17.787	+	BC098455 NM_015691	-103848	+	NM_001195081	-152244	+	BC140866 TSC_hg19_v1_chrX_+_9754543	-333098	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	37413	+	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	447918	-	AF035360 NM_001193277 AY112903	457263	-	BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##BC140866|SHROOM2|357|shroom family member 2##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112903|MID1|4281|midline 1 (Opitz/BBB syndrome)	2.985251	CTCF.p2:6:0.999	CTCF.p2:-46:0.987	CTCF.p2:61:1.000
chr1	186955147	186955275	reg1000662.p1	17.786	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-157123	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-305721	-	M33478 NM_002597	-524984	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	3491524	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	5172392	+	AY643711 NM_001039152	5330910	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.177731	
chr12	57632966	57633090	reg1000449.p2	17.783	+	CR457176 AF164796 AK129629 TSC_hg19_v1_chr12_-_57630888	-2149	-	NM_001166358 BX647711 AK301443 TSC_hg19_v1_chr12_+_57623972 BX648847 NM_001166359 NM_001166357 BC004189 BC004215 BC008711 AK296183 AK297173 AK315916	-9040	+	NM_001166356 NM_005412 TSC_hg19_v1_chr12_+_57623504 AK055053 AK223555 AK298231 AK301339 AK303827 BC032584 BC044211 AK295941 BC008066 BC012833 BC011911 BC091501 CU680112 CU689432 AB527799 BT006866 DQ891309 DQ894430	-9570	+	BC011910 NM_020142 AK094275	1472	-	TSC_hg19_v1_chr12_-_57642922 CU675915	9952	-	AK300688 BC008069 AK057013 AK311513 NM_145064	11908	-	CR457176|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AF164796|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AK129629|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##NM_001166358|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX647711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301443|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX648847|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166359|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166357|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK296183|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK297173|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK315916|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166356|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_005412|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK055053|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK223555|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK298231|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301339|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK303827|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC032584|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC044211|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK295941|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008066|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC011911|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC091501|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BT006866|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ891309|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ894430|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC011910|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##NM_020142|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AK094275|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AK300688|STAC3|246329|SH3 and cysteine rich domain 3##BC008069|STAC3|246329|SH3 and cysteine rich domain 3##AK057013|STAC3|246329|SH3 and cysteine rich domain 3##AK311513|STAC3|246329|SH3 and cysteine rich domain 3##NM_145064|STAC3|246329|SH3 and cysteine rich domain 3	1.09316	CTCF.p2:-16:0.999
chr9	135897856	135897978	reg1000575.p1	17.783	+	TSC_hg19_v1_chr9_+_135894809 BC070500	-3110	+	AY428733 NM_001135031 NM_004188	-43820	+	TSC_hg19_v1_chr9_-_135820004 AK303030 AK308412 AK297326 AF013168 BC108668 AK299654 BC070032 NM_000368 NM_001162426 NM_001162427	-77908	-	NM_001122823 NM_012087 TSC_hg19_v1_chr9_+_135906094 AK225761 AK311481 AK055092 AF133124 BC011355 BC017337	8182	+	TSC_hg19_v1_chr9_+_135906386 AK000194 AK097295 AK293980 BC006409 AY007123 DQ892071 DQ895265 AJ420443 BC030157	8471	+	NM_001807 S79774 M85201 BC042510 AK299965	39458	+	BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AY428733|GFI1B|8328|growth factor independent 1B transcription repressor##NM_001135031|GFI1B|8328|growth factor independent 1B transcription repressor##NM_004188|GFI1B|8328|growth factor independent 1B transcription repressor##AK303030|TSC1|7248|tuberous sclerosis 1##AK308412|TSC1|7248|tuberous sclerosis 1##AK297326|TSC1|7248|tuberous sclerosis 1##AF013168|TSC1|7248|tuberous sclerosis 1##BC108668|TSC1|7248|tuberous sclerosis 1##AK299654|TSC1|7248|tuberous sclerosis 1##BC070032|TSC1|7248|tuberous sclerosis 1##NM_000368|TSC1|7248|tuberous sclerosis 1##NM_001162426|TSC1|7248|tuberous sclerosis 1##NM_001162427|TSC1|7248|tuberous sclerosis 1##NM_001122823|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_012087|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK225761|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK311481|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK055092|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF133124|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC011355|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC017337|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)	1.414752	CTCF.p2:-9:0.985	CTCF.p2:28:0.430
chr6	159525243	159525374	reg1000759.p1	17.774	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-59207	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-104087	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	-104489	-	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	65122	+	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	588942	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	589054	-	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial	0.662373	CTCF.p2:9:0.662
chr2	208610901	208611046	reg1000847.p1	17.773	+	TSC_hg19_v1_chr2_+_208576466 BC067253	-34473	+	TSC_hg19_v1_chr2_+_208576365 BC047293	-34578	+	TSC_hg19_v1_chr2_+_208576363 AK097751 NM_001142300 NM_152523	-34672	+	U43318 AB043702 NM_003468	23123	-	TSC_hg19_v1_chr2_-_208890252 BX648983 NM_001080475	279291	-	HQ258094 U66583 BC117338 BC117340 NM_006891	378223	-	BC067253|CCNYL1|151195|cyclin Y-like 1##BC047293|CCNYL1|151195|cyclin Y-like 1##AK097751|CCNYL1|151195|cyclin Y-like 1##NM_001142300|CCNYL1|151195|cyclin Y-like 1##NM_152523|CCNYL1|151195|cyclin Y-like 1##U43318|FZD5|7855|frizzled family receptor 5##AB043702|FZD5|7855|frizzled family receptor 5##NM_003468|FZD5|7855|frizzled family receptor 5##BX648983|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##NM_001080475|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##HQ258094|CRYGD|1421|crystallin, gamma D##U66583|CRYGD|1421|crystallin, gamma D##BC117338|CRYGD|1421|crystallin, gamma D##BC117340|CRYGD|1421|crystallin, gamma D##NM_006891|CRYGD|1421|crystallin, gamma D	0.290187	CTCF.p2:-9:0.290
chrX	31311637	31311765	reg1000401.p1	17.772	+	CU688550 M92650 TSC_hg19_v1_chrX_-_31285072 BC070078 NM_004015 NM_004016 NM_004017 NM_004018 NM_004019 S42206 BC094758 AK299936 BC028720 S38776	-26667	-	BC069538 BC100768 BC100769 BC100770 BC069069 AF285592 NM_031894	-221538	-	TSC_hg19_v1_chrX_-_30907408 AK297274 NM_152787	-404242	-	NM_004014 S62617	214713	-	L35854 NM_004013 NM_004020 NM_004021 NM_004022 NM_004023	861884	-	NM_004011 NM_004012	1118669	-	M92650|DMD|1756|dystrophin##BC070078|DMD|1756|dystrophin##NM_004015|DMD|1756|dystrophin##NM_004016|DMD|1756|dystrophin##NM_004017|DMD|1756|dystrophin##NM_004018|DMD|1756|dystrophin##NM_004019|DMD|1756|dystrophin##S42206|DMD|1756|dystrophin##BC094758|DMD|1756|dystrophin##AK299936|DMD|1756|dystrophin##BC028720|DMD|1756|dystrophin##S38776|DMD|1756|dystrophin##BC069538|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100768|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100769|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100770|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC069069|FTHL17|53940|ferritin, heavy polypeptide-like 17##AF285592|FTHL17|53940|ferritin, heavy polypeptide-like 17##NM_031894|FTHL17|53940|ferritin, heavy polypeptide-like 17##AK297274|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##NM_152787|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin##L35854|DMD|1756|dystrophin##NM_004013|DMD|1756|dystrophin##NM_004020|DMD|1756|dystrophin##NM_004021|DMD|1756|dystrophin##NM_004022|DMD|1756|dystrophin##NM_004023|DMD|1756|dystrophin##NM_004011|DMD|1756|dystrophin##NM_004012|DMD|1756|dystrophin	0.029128	
chr1	46943216	46943341	reg1000792.p1	17.770	+	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	-83302	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-136835	+	TSC_hg19_v1_chr1_+_46769369 D28439 BC093060 BC001934 NM_006004 BC015177 BC107703 BC001426 AK311967 Y00764 M36647 BT007070	-173891	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	29394	+	NM_001097611	73608	-	BC002755 AB000409 AK096423 TSC_hg19_v1_chr1_-_47069922	126626	-	NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##D28439|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC093060|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001934|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006004|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC015177|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC107703|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001426|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##AK311967|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##Y00764|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##M36647|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BT007070|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001097611|KNCN|148930|kinocilin##BC002755|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AB000409|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK096423|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1	0.983317	CTCF.p2:-6:0.983
chr11	120381894	120382015	reg1000505.p1	17.769	+	BC063117 NM_001198665 NM_015313	-174337	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	-174850	+	AK096207 AK304086 TSC_hg19_v1_chr11_+_120196007 AK289680 AK294713 BC015232	-185936	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	511	+	AB384776 NM_014619 S67803	149073	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	512856	+	BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK096207|TMEM136|219902|transmembrane protein 136##AK304086|TMEM136|219902|transmembrane protein 136##AK289680|TMEM136|219902|transmembrane protein 136##AK294713|TMEM136|219902|transmembrane protein 136##BC015232|TMEM136|219902|transmembrane protein 136##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like	0.999223	CTCF.p2:-5:0.999
chr15	31493003	31493120	reg1000669.p1	17.768	+	GQ502181 HM135791 NM_001252020	-39633	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-99144	-	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	-209294	-	NM_001243538	29988	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	126277	+	AJ430383 NM_130901	454480	-	GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10##NM_001243538|LOC283710|283710|uncharacterized LOC283710##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A	0.53808	CTCF.p2:-7:0.538
chr10	103600559	103600664	reg1000289.p3	17.767	+	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	-999	-	TSC_hg19_v1_chr10_-_103578213 NM_001142434 NM_012215	-22393	-	TSC_hg19_v1_chr10_-_103578192 BC032591	-22425	-	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	2996	-	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	215301	-	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	224531	+	DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##NM_001142434|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##NM_012215|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC032591|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6	0.378477	CTCF.p2:-11:0.378
chr1	46993807	46993931	reg1000500.p1	17.760	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	-21197	+	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	-133893	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-187426	+	NM_001097611	23017	-	BC002755 AB000409 AK096423 TSC_hg19_v1_chr1_-_47069922	76035	-	TSC_hg19_v1_chr1_-_47069924 AK290456	76059	-	NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##NM_001097611|KNCN|148930|kinocilin##BC002755|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AB000409|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK096423|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK290456|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1	0.999806	CTCF.p2:12:1.000
chr11	118560929	118561102	reg1000494.p2	17.756	+	AK223140 AK309565 AK091981 AK223143 AX747289 BC109206 NM_007180 AB000824	-10648	-	NM_001144758 NM_001144759 TSC_hg19_v1_chr11_+_118478332 CR749783 BC098586 AB014538 AK295819 AL832373 AK074070 AK125783	-82638	+	AB094090 NM_015157	-83803	+	BC065007 TSC_hg19_v1_chr11_-_118661679 AK313244	100618	-	TSC_hg19_v1_chr11_-_118661835 D17532	100821	-	BC039826 TSC_hg19_v1_chr11_-_118661855	100840	-	AK223140|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK309565|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK091981|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK223143|TREH|11181|trehalase (brush-border membrane glycoprotein)##BC109206|TREH|11181|trehalase (brush-border membrane glycoprotein)##NM_007180|TREH|11181|trehalase (brush-border membrane glycoprotein)##AB000824|TREH|11181|trehalase (brush-border membrane glycoprotein)##NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AB094090|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##NM_015157|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##BC065007|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK313244|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##D17532|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC039826|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	0.967259	CTCF.p2:29:0.212	CTCF.p2:-56:0.706
chr19	35959718	35959848	reg1000555.p1	17.754	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	-19166	+	AK290710 NM_005304 BC035657	-110289	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	-117333	+	AM392574 AM392667 AM392672 AM392738 AM392847 AM392851 AM393397 AM393477 AY359007 HQ258707 BC130501 NM_001244847 NM_207392	21605	-	AY622964 AY789707 AF086315 AL832080 NM_001035516	33022	-	AY789698 AY789699 AY789700 AY789701 AY789702 AY789703 AY789704 AY789705 AY789706 BC011886 TSC_hg19_v1_chr19_-_36001373 AK096215 AK304668 AK316475 EF158323 NM_001126059 EF158324 EF158325 EF158326	41590	-	AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2##AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##AM392574|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392667|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392672|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392738|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392847|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392851|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393397|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393477|KRTDAP|388533|keratinocyte differentiation-associated protein##AY359007|KRTDAP|388533|keratinocyte differentiation-associated protein##HQ258707|KRTDAP|388533|keratinocyte differentiation-associated protein##BC130501|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_001244847|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_207392|KRTDAP|388533|keratinocyte differentiation-associated protein##AY622964|DMKN|93099|dermokine##AY789707|DMKN|93099|dermokine##AF086315|DMKN|93099|dermokine##AL832080|DMKN|93099|dermokine##NM_001035516|DMKN|93099|dermokine##AY789698|DMKN|93099|dermokine##AY789699|DMKN|93099|dermokine##AY789700|DMKN|93099|dermokine##AY789701|DMKN|93099|dermokine##AY789702|DMKN|93099|dermokine##AY789703|DMKN|93099|dermokine##AY789704|DMKN|93099|dermokine##AY789705|DMKN|93099|dermokine##AY789706|DMKN|93099|dermokine##BC011886|DMKN|93099|dermokine##AK096215|DMKN|93099|dermokine##AK304668|DMKN|93099|dermokine##AK316475|DMKN|93099|dermokine##EF158323|DMKN|93099|dermokine##NM_001126059|DMKN|93099|dermokine##EF158324|DMKN|93099|dermokine##EF158325|DMKN|93099|dermokine##EF158326|DMKN|93099|dermokine	0.843437	CTCF.p2:22:0.843
chr12	112191130	112191241	reg1000349.p1	17.752	+	AK092356 AK310923 AX747497 TSC_hg19_v1_chr12_+_112123871 AL832043 BC015056 AY323912 BC126358	-67279	+	TSC_hg19_v1_chr12_+_112123859 NM_001136538 NM_025247	-67331	+	TSC_hg19_v1_chr12_-_112123771 NM_006768	-67389	-	NM_000690 NM_001204889 TSC_hg19_v1_chr12_+_112204694	13507	+	TSC_hg19_v1_chr12_+_112204765 AY621070 BC002967 X05409 AK223373 AK301375 Y00109 AK314856 BC071839 AB385105 CR456991 CU678320	13563	+	TSC_hg19_v1_chr12_-_112279735 BC071748 BC007973 BC015633 BC032560 AK124158 BC107695	88547	-	AK092356|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AK310923|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AL832043|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC015056|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AY323912|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC126358|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##NM_001136538|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##NM_025247|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##NM_006768|BRAP|8315|BRCA1 associated protein##NM_000690|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##NM_001204889|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC007973|C12orf47|51275|chromosome 12 open reading frame 47##BC015633|C12orf47|51275|chromosome 12 open reading frame 47##BC032560|C12orf47|51275|chromosome 12 open reading frame 47	0.994985	CTCF.p2:-23:0.995
chr5	60954475	60954593	reg1000496.p1	17.748	+	AK094862 NM_173667	-20899	+	TSC_hg19_v1_chr5_+_60628085 NM_020928	-326436	+	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	-496267	-	TSC_hg19_v1_chr5_+_61601970 NM_001098511 NM_001243952 NM_001243953 NM_004520	647439	+	TSC_hg19_v1_chr5_+_61602066 BC047544	647548	+	TSC_hg19_v1_chr5_+_61602278 AK297347 AK307880 EF560716 EF560728 EU832810 GQ129246 AK315866	647736	+	AK094862|C5orf64|285668|chromosome 5 open reading frame 64##NM_173667|C5orf64|285668|chromosome 5 open reading frame 64##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6##BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##NM_001098511|KIF2A|3796|kinesin heavy chain member 2A##NM_001243952|KIF2A|3796|kinesin heavy chain member 2A##NM_001243953|KIF2A|3796|kinesin heavy chain member 2A##NM_004520|KIF2A|3796|kinesin heavy chain member 2A##BC047544|KIF2A|3796|kinesin heavy chain member 2A##AK297347|KIF2A|3796|kinesin heavy chain member 2A##AK307880|KIF2A|3796|kinesin heavy chain member 2A##EF560716|KIF2A|3796|kinesin heavy chain member 2A##EF560728|KIF2A|3796|kinesin heavy chain member 2A##EU832810|KIF2A|3796|kinesin heavy chain member 2A##GQ129246|KIF2A|3796|kinesin heavy chain member 2A##AK315866|KIF2A|3796|kinesin heavy chain member 2A	0.999649	CTCF.p2:5:1.000
chr12	6394281	6394422	reg1000837.p1	17.744	+	TSC_hg19_v1_chr12_+_6309565 NM_001769 AK315219 AK308700 AK296332 AK309527 AY966455 X60111 AK296894 AK298431 BC011988 M38690 AY423720 DQ891314 DQ894498 AB590218 CU680148 L34068	-84781	+	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	-160592	-	AJ272204 NM_020373	-338954	-	AK001527 NM_018173 BC104751 BC105961 BC109095	25282	+	TSC_hg19_v1_chr12_+_6419886 BC040273	25534	+	AK023741 NM_001144856	25747	+	NM_001769|CD9|928|CD9 molecule##AK315219|CD9|928|CD9 molecule##AK308700|CD9|928|CD9 molecule##AK296332|CD9|928|CD9 molecule##AK309527|CD9|928|CD9 molecule##AY966455|CD9|928|CD9 molecule##X60111|CD9|928|CD9 molecule##AK296894|CD9|928|CD9 molecule##AK298431|CD9|928|CD9 molecule##BC011988|CD9|928|CD9 molecule##M38690|CD9|928|CD9 molecule##AY423720|CD9|928|CD9 molecule##DQ891314|CD9|928|CD9 molecule##DQ894498|CD9|928|CD9 molecule##L34068|CD9|928|CD9 molecule##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor##AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##AK001527|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_018173|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC104751|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC105961|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC109095|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC040273|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AK023741|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144856|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6	0.999753	CTCF.p2:7:1.000
chr1	46813892	46814007	reg1000461.p1	17.742	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-7506	+	TSC_hg19_v1_chr1_+_46769369 D28439 BC093060 BC001934 NM_006004 BC015177 BC107703 BC001426 AK311967 Y00764 M36647 BT007070	-44562	+	TSC_hg19_v1_chr1_-_46769053 NM_006369 AK297596	-44901	-	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	46027	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	158723	+	NM_001097611	202937	-	NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##D28439|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC093060|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001934|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006004|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC015177|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC107703|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001426|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##AK311967|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##Y00764|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##M36647|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BT007070|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006369|LRRC41|10489|leucine rich repeat containing 41##AK297596|LRRC41|10489|leucine rich repeat containing 41##NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001097611|KNCN|148930|kinocilin	1.748167	CTCF.p2:-1:0.938	CTCF.p2:24:0.650
chr3	168338785	168338899	reg1002495.p2	17.741	+	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	-525411	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	-525727	-	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-885353	+	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	525237	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	525520	-	BX640908 NM_001164000	526679	-	AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus	0.397672	CTCF.p2:3:0.398
chr6	167555766	167555891	reg1000404.p1	17.741	+	NM_031409 U68031 U68030	-19579	+	NM_004367	-30534	+	TSC_hg19_v1_chr6_+_167412884 NM_007045 NM_194429 Y18046 AK294950 AK289846 BX647686 AK312791 BC011902 AB590215 CU680104 DQ893037 DQ896278 AJ420472	-142975	+	BC095537 NM_005299	15488	-	NM_001145121	28252	+	AK091987 AX747293 NM_001143947 NM_018974 AJ422141 AJ508812 BC098248 BC099718 BC105635	149048	+	NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6##NM_007045|FGFR1OP|11116|FGFR1 oncogene partner##NM_194429|FGFR1OP|11116|FGFR1 oncogene partner##Y18046|FGFR1OP|11116|FGFR1 oncogene partner##AK294950|FGFR1OP|11116|FGFR1 oncogene partner##AK289846|FGFR1OP|11116|FGFR1 oncogene partner##AK312791|FGFR1OP|11116|FGFR1 oncogene partner##BC011902|FGFR1OP|11116|FGFR1 oncogene partner##DQ893037|FGFR1OP|11116|FGFR1 oncogene partner##DQ896278|FGFR1OP|11116|FGFR1 oncogene partner##AJ420472|FGFR1OP|11116|FGFR1 oncogene partner##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31##NM_001145121|TCP10L2|401285|t-complex 10-like 2 (mouse)##AK091987|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_001143947|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_018974|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ422141|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ508812|UNC93A|54346|unc-93 homolog A (C. elegans)##BC098248|UNC93A|54346|unc-93 homolog A (C. elegans)##BC099718|UNC93A|54346|unc-93 homolog A (C. elegans)##BC105635|UNC93A|54346|unc-93 homolog A (C. elegans)	0.91837	CTCF.p2:20:0.918
chr22	40420875	40421025	reg1000730.p1	17.737	+	TSC_hg19_v1_chr22_+_40390935 BC031099 NM_138435	-30006	+	AK303280 AK303657 AK312830 TSC_hg19_v1_chr22_+_40322634 AK303470	-98326	+	TSC_hg19_v1_chr22_+_40297183 AF129476 AF090456 CR456498 Y18051	-123703	+	TSC_hg19_v1_chr22_+_40440774 NM_001024843	19959	+	TSC_hg19_v1_chr22_+_40441403 BC028626	20482	+	TSC_hg19_v1_chr22_+_40573938 NM_001162501 NM_015088 AK296590 AK294519 AB029016	153049	+	BC031099|FAM83F|113828|family with sequence similarity 83, member F##NM_138435|FAM83F|113828|family with sequence similarity 83, member F##AK303280|GRAP2|9402|GRB2-related adaptor protein 2##AK303657|GRAP2|9402|GRB2-related adaptor protein 2##AK312830|GRAP2|9402|GRB2-related adaptor protein 2##AK303470|GRAP2|9402|GRB2-related adaptor protein 2##AF129476|GRAP2|9402|GRB2-related adaptor protein 2##AF090456|GRAP2|9402|GRB2-related adaptor protein 2##CR456498|GRAP2|9402|GRB2-related adaptor protein 2##Y18051|GRAP2|9402|GRB2-related adaptor protein 2##NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B##BC028626|TNRC6B|23112|trinucleotide repeat containing 6B##NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B##NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B##AK296590|TNRC6B|23112|trinucleotide repeat containing 6B##AK294519|TNRC6B|23112|trinucleotide repeat containing 6B##AB029016|TNRC6B|23112|trinucleotide repeat containing 6B	0.822827	CTCF.p2:19:0.710
chr16	55499102	55499238	reg1000566.p1	17.734	+	AY335937 NM_024335	-140700	+	AY335945 BC131510 NM_001252197 NM_005853	-534060	+	AF275804 TSC_hg19_v1_chr16_-_54962719	-536455	-	TSC_hg19_v1_chr16_+_55513109 NM_004530 X58968 AK312711 BC002576 DQ891952 DQ895138 AB385158 CU678050 J03210	13950	+	AK310314 NM_001127891	16300	+	TSC_hg19_v1_chr16_+_55542966 NM_017839 BC002472	43774	+	AY335937|IRX6|79190|iroquois homeobox 6##NM_024335|IRX6|79190|iroquois homeobox 6##AY335945|IRX5|10265|iroquois homeobox 5##BC131510|IRX5|10265|iroquois homeobox 5##NM_001252197|IRX5|10265|iroquois homeobox 5##NM_005853|IRX5|10265|iroquois homeobox 5##AF275804|CRNDE|643911|colorectal neoplasia differentially expressed (non-protein coding)##NM_004530|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##X58968|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##AK312711|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##BC002576|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##DQ891952|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##DQ895138|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##J03210|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##AK310314|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##NM_001127891|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##NM_017839|LPCAT2|54947|lysophosphatidylcholine acyltransferase 2##BC002472|LPCAT2|54947|lysophosphatidylcholine acyltransferase 2	1.977718	CTCF.p2:-34:0.978	CTCF.p2:44:1.000
chr12	111136170	111136296	reg1000450.p1	17.732	+	AK293543 NM_001040107	-8634	-	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	-9275	-	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	-84308	+	L07395 AK297882 AB590512 EU831993 EU832086 TSC_hg19_v1_chr12_-_111180593	44313	-	TSC_hg19_v1_chr12_-_111180641 X74008 BC014073	44423	-	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	44523	-	AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##L07395|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK297882|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU831993|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU832086|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##X74008|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC014073|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme	0.971574	CTCF.p2:5:0.972
chr3	47563729	47563848	reg1000484.p1	17.718	+	DQ787088 BC000623 BC014204 TSC_hg19_v1_chr3_-_47555203 AK225721 AK000218 AK298202 NM_001031703	-8646	-	TSC_hg19_v1_chr3_-_47517417 AK291484 D83782 NM_012235	-46356	-	TSC_hg19_v1_chr3_-_47517349 AK300311	-46451	-	AB463496 AF059274 TSC_hg19_v1_chr3_-_47620336 NM_001206943 NM_001206944 NM_006574	56501	-	AK294621 NM_001206942 NM_001206945	57941	-	TSC_hg19_v1_chr3_-_47823302 EU832157 EU832251	259501	-	DQ787088|C3orf75|54859|chromosome 3 open reading frame 75##BC000623|C3orf75|54859|chromosome 3 open reading frame 75##BC014204|C3orf75|54859|chromosome 3 open reading frame 75##AK225721|C3orf75|54859|chromosome 3 open reading frame 75##AK000218|C3orf75|54859|chromosome 3 open reading frame 75##AK298202|C3orf75|54859|chromosome 3 open reading frame 75##NM_001031703|C3orf75|54859|chromosome 3 open reading frame 75##AK291484|SCAP|22937|SREBF chaperone##D83782|SCAP|22937|SREBF chaperone##NM_012235|SCAP|22937|SREBF chaperone##AK300311|SCAP|22937|SREBF chaperone##AF059274|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_001206943|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_001206944|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_006574|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##AK294621|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_001206942|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_001206945|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##EU832157|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1##EU832251|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	0.998984	CTCF.p2:-21:0.999
chr7	2926738	2926883	reg1000770.p1	17.712	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-43002	-	AK289723 AB075830 BC146753 NM_133463	-207652	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-255107	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	156652	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	414189	+	TSC_hg19_v1_chr7_+_4721925 NM_001037165	1795028	+	AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##NM_001037165|FOXK1|221937|forkhead box K1	0.0	
chr1	31384313	31384441	reg1000680.p1	17.709	+	AB385258 AF248634 NM_014654 TSC_hg19_v1_chr1_-_31381606	-2829	-	TSC_hg19_v1_chr1_-_31345363 AL049426	-38979	-	TSC_hg19_v1_chr1_-_31230697 NM_006762	-153687	-	TSC_hg19_v1_chr1_-_31538543 BC013398 D43951 AK291779 AK300457 AF315592 AK096476 AK222605	154140	-	TSC_hg19_v1_chr1_-_31538565 GQ334687 GQ334688 NM_001020658 NM_014676 AK294477	154215	-	BX647437 TSC_hg19_v1_chr1_-_31538801	154406	-	AF248634|SDC3|9672|syndecan 3##NM_014654|SDC3|9672|syndecan 3##AL049426|SDC3|9672|syndecan 3##NM_006762|LAPTM5|7805|lysosomal protein transmembrane 5##BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)##D43951|PUM1|9698|pumilio homolog 1 (Drosophila)##AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)##AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)##AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)##AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)##AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)##NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)##NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)##AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)##BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)	0.706765	CTCF.p2:19:0.707
chr2	219221391	219221518	reg1000737.p1	17.708	+	TSC_hg19_v1_chr2_+_219188021 AY358753 CU678300 AM393075 AM393168 BC002937 AK309308	-33417	+	TSC_hg19_v1_chr2_+_219187970 NM_022572	-33539	+	TSC_hg19_v1_chr2_-_219157237 AF193045 BC007980 AK095270 AK300597 AK298123 BC026348 AK130713 AK298500 BC026693 AK130380 BC013428 NM_022152	-64199	-	BC052750 NM_198559 CU690932	137	+	AK307954 NM_000578 TSC_hg19_v1_chr2_+_219246995 D50402 AB209650 AK303398 AK310914 AK298667 AK311405 D50403 AK294707 BC041787 L32185 BC071165 BC033754	25455	+	NM_001206878	41606	+	AY358753|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AM393075|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AM393168|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC002937|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK309308|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##NM_022572|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AF193045|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC007980|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK300597|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK298123|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC026348|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK130713|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK298500|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC026693|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK130380|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC013428|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##NM_022152|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC052750|C2orf62|375307|chromosome 2 open reading frame 62##NM_198559|C2orf62|375307|chromosome 2 open reading frame 62##AK307954|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##NM_000578|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##D50402|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##AB209650|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##AK303398|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##AK310914|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##AK298667|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##AK311405|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##D50403|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##AK294707|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##BC041787|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##L32185|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##BC071165|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##BC033754|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##NM_001206878|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	0.801595	CTCF.p2:-12:0.802
chrX	153763118	153763256	reg1000613.p1	17.703	+	X87193 AK057945 TSC_hg19_v1_chrX_-_153744557 BC002934 AK314682 AK024601 AK294116 NM_001171132 NM_001171133 NM_001171134 NM_021806	-18707	-	TSC_hg19_v1_chrX_-_153718996 NM_001142391 NM_001142392 NM_019848	-44185	-	TSC_hg19_v1_chrX_-_153718969 BC004966	-44232	-	AY114157 BC012114 NM_001099856 AF074382	7280	+	TSC_hg19_v1_chrX_-_153775062 BC000337 AK292304 AK302341	11845	-	TSC_hg19_v1_chrX_-_153775179 S58359 M27940 NM_000402	11961	-	X87193|FAM3A|60343|family with sequence similarity 3, member A##AK057945|FAM3A|60343|family with sequence similarity 3, member A##BC002934|FAM3A|60343|family with sequence similarity 3, member A##AK314682|FAM3A|60343|family with sequence similarity 3, member A##AK024601|FAM3A|60343|family with sequence similarity 3, member A##AK294116|FAM3A|60343|family with sequence similarity 3, member A##NM_001171132|FAM3A|60343|family with sequence similarity 3, member A##NM_001171133|FAM3A|60343|family with sequence similarity 3, member A##NM_001171134|FAM3A|60343|family with sequence similarity 3, member A##NM_021806|FAM3A|60343|family with sequence similarity 3, member A##NM_001142391|SLC10A3|8273|solute carrier family 10 (sodium/bile acid cotransporter family), member 3##NM_001142392|SLC10A3|8273|solute carrier family 10 (sodium/bile acid cotransporter family), member 3##NM_019848|SLC10A3|8273|solute carrier family 10 (sodium/bile acid cotransporter family), member 3##BC004966|SLC10A3|8273|solute carrier family 10 (sodium/bile acid cotransporter family), member 3##AY114157|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC012114|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##NM_001099856|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AF074382|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC000337|G6PD|2539|glucose-6-phosphate dehydrogenase##AK292304|G6PD|2539|glucose-6-phosphate dehydrogenase##AK302341|G6PD|2539|glucose-6-phosphate dehydrogenase##S58359|G6PD|2539|glucose-6-phosphate dehydrogenase##M27940|G6PD|2539|glucose-6-phosphate dehydrogenase##NM_000402|G6PD|2539|glucose-6-phosphate dehydrogenase	1.321565	CTCF.p2:-9:0.324	CTCF.p2:59:0.997
chr10	71152393	71152515	reg1000733.p1	17.702	+	TSC_hg19_v1_chr10_+_71078629 BC008730 DQ893281 DQ896762 CU679065 AB384968	-73789	+	AK309904 TSC_hg19_v1_chr10_+_71078627	-73827	+	TSC_hg19_v1_chr10_+_71078602 AK292012 NM_000188 AK294428 AB209526 M75126	-73855	+	AK300649 BC033742 AK291996 NM_001057	24166	-	TSC_hg19_v1_chr10_+_71211220 NM_012339 BC003157 BC004161 AF120266	58807	+	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	58879	+	BC008730|HK1|3098|hexokinase 1##DQ893281|HK1|3098|hexokinase 1##DQ896762|HK1|3098|hexokinase 1##AK309904|HK1|3098|hexokinase 1##AK292012|HK1|3098|hexokinase 1##NM_000188|HK1|3098|hexokinase 1##AK294428|HK1|3098|hexokinase 1##AB209526|HK1|3098|hexokinase 1##M75126|HK1|3098|hexokinase 1##AK300649|TACR2|6865|tachykinin receptor 2##BC033742|TACR2|6865|tachykinin receptor 2##AK291996|TACR2|6865|tachykinin receptor 2##NM_001057|TACR2|6865|tachykinin receptor 2##NM_012339|TSPAN15|23555|tetraspanin 15##BC003157|TSPAN15|23555|tetraspanin 15##BC004161|TSPAN15|23555|tetraspanin 15##AF120266|TSPAN15|23555|tetraspanin 15	0.950541	CTCF.p2:11:0.951
chr2	235044439	235044564	reg1000762.p1	17.701	+	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-85114	+	AY090109 NM_024080 BC126342 BC143819	-218456	+	TSC_hg19_v1_chr2_-_234777033 AK301707	-267464	-	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	361218	-	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	816157	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	1358302	+	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##AK301707|MSL3P1|151507|male-specific lethal 3 homolog (Drosophila) pseudogene 1##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.602209	CTCF.p2:-13:0.602
chr15	82400947	82401080	reg1000853.p1	17.700	+	AB095929 BC111545 BC036211 TSC_hg19_v1_chr15_-_82338485	-62537	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	-62647	-	AK094145 TSC_hg19_v1_chr15_-_82336883	-64130	-	BC014628 TSC_hg19_v1_chr15_-_82555043 AK300348 AK056656 BX538332	154018	-	TSC_hg19_v1_chr15_-_82555076 NM_001040610 NM_024580	154076	-	TSC_hg19_v1_chr15_+_82555158 AL833762 NM_001008226 BC144647 AK304339	154140	+	AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)##BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)##BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##BC014628|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK300348|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK056656|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BX538332|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_001040610|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_024580|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AL833762|FAM154B|283726|family with sequence similarity 154, member B##NM_001008226|FAM154B|283726|family with sequence similarity 154, member B##AK304339|FAM154B|283726|family with sequence similarity 154, member B	0.83484	CTCF.p2:3:0.835
chr19	35843779	35843923	reg1000774.p1	17.700	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	-1401	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	-23760	+	NM_001199216 NM_002361 NM_080600 AK223562 BC093045 TSC_hg19_v1_chr19_+_35783063 BC034042 AK094545 AK222649 AK308976 M29273 AB209170 AK294644 AK222680 BC053347	-60809	+	AK290710 NM_005304 BC035657	5643	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	96766	+	AM392574 AM392667 AM392672 AM392738 AM392847 AM392851 AM393397 AM393477 AY359007 HQ258707 BC130501 NM_001244847 NM_207392	137537	-	NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule##NM_001199216|MAG|4099|myelin associated glycoprotein##NM_002361|MAG|4099|myelin associated glycoprotein##NM_080600|MAG|4099|myelin associated glycoprotein##AK223562|MAG|4099|myelin associated glycoprotein##BC093045|MAG|4099|myelin associated glycoprotein##BC034042|MAG|4099|myelin associated glycoprotein##AK094545|MAG|4099|myelin associated glycoprotein##AK222649|MAG|4099|myelin associated glycoprotein##AK308976|MAG|4099|myelin associated glycoprotein##M29273|MAG|4099|myelin associated glycoprotein##AK294644|MAG|4099|myelin associated glycoprotein##AK222680|MAG|4099|myelin associated glycoprotein##BC053347|MAG|4099|myelin associated glycoprotein##AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2##AM392574|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392667|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392672|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392738|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392847|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392851|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393397|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393477|KRTDAP|388533|keratinocyte differentiation-associated protein##AY359007|KRTDAP|388533|keratinocyte differentiation-associated protein##HQ258707|KRTDAP|388533|keratinocyte differentiation-associated protein##BC130501|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_001244847|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_207392|KRTDAP|388533|keratinocyte differentiation-associated protein	0.073651	
chr11	130083093	130083225	reg1000894.p1	17.692	+	TSC_hg19_v1_chr11_+_130029782 AF118224 AF133086 AF057145 AB030036 DQ891626 DQ894442 AB528443 CU688892	-53336	+	TSC_hg19_v1_chr11_+_130029713 BC030532	-53418	+	AK314173 TSC_hg19_v1_chr11_+_130029706	-53455	+	TSC_hg19_v1_chr11_-_130184330 AF161548	101172	-	TSC_hg19_v1_chr11_+_130184331 AK091840 AX747213	101213	+	TSC_hg19_v1_chr11_-_130184509 AK314701 BC030580 BC049375 BC071729 NM_014155	101373	-	AF118224|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##AF133086|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##AF057145|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##AB030036|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##DQ891626|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##DQ894442|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##BC030532|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##AK314173|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##AF161548|ZBTB44|29068|zinc finger and BTB domain containing 44##AK091840|FLJ34521|646383|uncharacterized LOC646383##AK314701|ZBTB44|29068|zinc finger and BTB domain containing 44##BC030580|ZBTB44|29068|zinc finger and BTB domain containing 44##BC049375|ZBTB44|29068|zinc finger and BTB domain containing 44##BC071729|ZBTB44|29068|zinc finger and BTB domain containing 44##NM_014155|ZBTB44|29068|zinc finger and BTB domain containing 44	0.206705	
chr10	105004551	105004661	reg1000443.p2	17.691	+	BX648078 TSC_hg19_v1_chr10_-_104953030 BC001595 AK127670 AK291667 AK312517 D38524 NM_001134373 NM_012229	-51559	-	TSC_hg19_v1_chr10_+_104678078 BC021222 AK023479 NM_017649 NM_199076 NM_199077	-326549	+	NM_020682 AK057833 AK225972 AF226730 AK309737 BC119637 BC119638	-375349	+	BC157875 BC171885 NM_001143909 BC137242 BC137243 BC157829 BC171806	1067	+	TSC_hg19_v1_chr10_+_105036894 BC006359 NM_032727 S78296 DQ892733 DQ895980	32267	+	TSC_hg19_v1_chr10_+_105037444 AB209785	32848	+	BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II##BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II##AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II##AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II##AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II##D38524|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II##BC021222|CNNM2|54805|cyclin M2##AK023479|CNNM2|54805|cyclin M2##NM_017649|CNNM2|54805|cyclin M2##NM_199076|CNNM2|54805|cyclin M2##NM_199077|CNNM2|54805|cyclin M2##NM_020682|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK057833|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK225972|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AF226730|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK309737|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119637|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119638|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC157875|LOC729020|729020|rcRPE##BC171885|LOC729020|729020|rcRPE##NM_001143909|LOC729020|729020|rcRPE##BC137242|LOC729020|729020|rcRPE##BC137243|LOC729020|729020|rcRPE##BC157829|LOC729020|729020|rcRPE##BC171806|LOC729020|729020|rcRPE##BC006359|INA|9118|internexin neuronal intermediate filament protein, alpha##NM_032727|INA|9118|internexin neuronal intermediate filament protein, alpha##S78296|INA|9118|internexin neuronal intermediate filament protein, alpha##DQ892733|INA|9118|internexin neuronal intermediate filament protein, alpha##DQ895980|INA|9118|internexin neuronal intermediate filament protein, alpha##AB209785|INA|9118|internexin neuronal intermediate filament protein, alpha	0.981712	CTCF.p2:10:0.982
chr10	97989417	97989552	reg1000683.p1	17.683	+	BC109045 BC109046 TSC_hg19_v1_chr10_+_97889812 AK095317 BC030967	-99742	+	TSC_hg19_v1_chr10_+_97889471 CR627437 NM_014803 BC011627	-99988	+	TSC_hg19_v1_chr10_-_97849981 BC028619	-139495	-	AM180327 AM180328 AM180329 AM180330 AM180331 AM180332 AM180333 AM180334 AM180335 AM180336 AM180337 AM180338 AM180339 AM180340 AM180341 AM180342 AM180343 AM180344 AM180345 AM180346 BC018906 BC110298 AK027779 AF068180 AF068181 AK225546 NM_001114094 NM_013314	41759	-	NM_001017520 NM_004088 AB046378 AK313615 M26144 BC012920 AK223317 DQ891465 DQ894645	74684	+	AF367761 NM_001040102 NM_001040103 NM_033207	129590	-	BC109045|ZNF518A|9849|zinc finger protein 518A##BC109046|ZNF518A|9849|zinc finger protein 518A##BC030967|ZNF518A|9849|zinc finger protein 518A##CR627437|ZNF518A|9849|zinc finger protein 518A##NM_014803|ZNF518A|9849|zinc finger protein 518A##BC028619|LOC728558|728558|uncharacterized LOC728558##AM180327|BLNK|29760|B-cell linker##AM180328|BLNK|29760|B-cell linker##AM180329|BLNK|29760|B-cell linker##AM180330|BLNK|29760|B-cell linker##AM180331|BLNK|29760|B-cell linker##AM180332|BLNK|29760|B-cell linker##AM180333|BLNK|29760|B-cell linker##AM180334|BLNK|29760|B-cell linker##AM180335|BLNK|29760|B-cell linker##AM180336|BLNK|29760|B-cell linker##AM180337|BLNK|29760|B-cell linker##AM180338|BLNK|29760|B-cell linker##AM180339|BLNK|29760|B-cell linker##AM180340|BLNK|29760|B-cell linker##AM180341|BLNK|29760|B-cell linker##AM180342|BLNK|29760|B-cell linker##AM180343|BLNK|29760|B-cell linker##AM180344|BLNK|29760|B-cell linker##AM180345|BLNK|29760|B-cell linker##AM180346|BLNK|29760|B-cell linker##BC018906|BLNK|29760|B-cell linker##BC110298|BLNK|29760|B-cell linker##AK027779|BLNK|29760|B-cell linker##AF068180|BLNK|29760|B-cell linker##AF068181|BLNK|29760|B-cell linker##AK225546|BLNK|29760|B-cell linker##NM_001114094|BLNK|29760|B-cell linker##NM_013314|BLNK|29760|B-cell linker##NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal##NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal##AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal##AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal##M26144|DNTT|1791|deoxynucleotidyltransferase, terminal##BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal##AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal##AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein	0.998134	CTCF.p2:-10:0.998
chr16	4380403	4380528	reg1000766.p1	17.680	+	TSC_hg19_v1_chr16_-_4323057 AK309301	-57400	-	NM_003223 S73885 TSC_hg19_v1_chr16_-_4323025	-57453	-	X57435 DQ893617 DQ895293 CR541726 CU679751 AB464303 TSC_hg19_v1_chr16_-_4322885 BC010576	-57637	-	AF325914 NM_032575 AB463687	1786	+	AK095566 TSC_hg19_v1_chr16_+_4385160	4686	+	TSC_hg19_v1_chr16_-_4401268 AF151894 AF349455 BC005024 AK026514 NM_016069	20853	-	AK309301|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##X57435|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ893617|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ895293|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##CR541726|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##BC010576|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##AF325914|GLIS2|84662|GLIS family zinc finger 2##NM_032575|GLIS2|84662|GLIS family zinc finger 2##AK095566|GLIS2|84662|GLIS family zinc finger 2##AF151894|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AF349455|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##BC005024|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AK026514|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##NM_016069|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)	0.998415	CTCF.p2:13:0.998
chr9	137875063	137875184	reg1000829.p1	17.680	+	D83920 DQ891426 DQ894436 CR749452 BC020635 AK314867 NM_002003	-65366	-	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	-102463	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	-341313	+	NM_014279 NM_006334 TSC_hg19_v1_chr9_+_137967133	91992	+	D82343 BC000189 TSC_hg19_v1_chr9_+_137967290	92155	+	BC008763 BC011741 TSC_hg19_v1_chr9_+_137967372 AK289719	92250	+	D83920|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ891426|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ894436|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##CR749452|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##BC020635|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##AK314867|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_002003|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D90279|COL5A1|1289|collagen, type V, alpha 1##NM_014279|OLFM1|10439|olfactomedin 1##NM_006334|OLFM1|10439|olfactomedin 1##D82343|OLFM1|10439|olfactomedin 1##BC000189|OLFM1|10439|olfactomedin 1##BC008763|OLFM1|10439|olfactomedin 1##BC011741|OLFM1|10439|olfactomedin 1##AK289719|OLFM1|10439|olfactomedin 1	0.995692	CTCF.p2:9:0.996
chr11	2442053	2442168	reg1000239.p1	17.673	+	AF125568 NM_005706	-18588	+	TSC_hg19_v1_chr11_+_2421990 BC006091	-20114	+	TSC_hg19_v1_chr11_+_2398543 NM_004356 BC093047 M33680	-43563	+	AJ270996 BC093787 BC093789 BC143351 BC143353 AF177473 NM_014555	2147	-	TSC_hg19_v1_chr11_+_2466237 AF000571 NM_000218 EF010934 AB464057 AY114213 U86146	24139	+	BC007733 TSC_hg19_v1_chr11_-_2560881	118737	-	AF125568|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_005706|TSSC4|10078|tumor suppressing subtransferable candidate 4##BC006091|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_004356|CD81|975|CD81 molecule##BC093047|CD81|975|CD81 molecule##M33680|CD81|975|CD81 molecule##AJ270996|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093787|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093789|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143351|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143353|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF177473|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##NM_014555|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF000571|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##NM_000218|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##EF010934|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AY114213|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##U86146|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1	0.998719	CTCF.p2:5:0.999
chr11	122073761	122073885	reg1000543.p1	17.671	+	BC130361 BC130363 AF303179 NM_001001786	-86962	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-612725	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-750648	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	452724	+	BC070266 AK313578 AF001622 NM_019604	635406	+	AK097534 BC068507 NM_024806 NM_199124	679608	+	BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63	0.91366	CTCF.p2:-4:0.900
chr1	84899595	84899745	reg1001010.p1	17.669	+	AF333389 NM_058248 BC080621 BC065182	-25579	+	AF274571 NM_021233 BC126136 BC126138 HQ258219	-35434	+	BC037973 NM_001134664	-131337	+	NM_025065 TSC_hg19_v1_chr1_+_84944949 AK022537 BC016051 CU677559 AF322053	45280	+	AF493873 BT006823 TSC_hg19_v1_chr1_-_84971803 AF038955	72127	-	TSC_hg19_v1_chr1_-_84971851 BC003563	72190	-	AF333389|DNASE2B|58511|deoxyribonuclease II beta##NM_058248|DNASE2B|58511|deoxyribonuclease II beta##BC080621|DNASE2B|58511|deoxyribonuclease II beta##BC065182|DNASE2B|58511|deoxyribonuclease II beta##AF274571|DNASE2B|58511|deoxyribonuclease II beta##NM_021233|DNASE2B|58511|deoxyribonuclease II beta##BC126136|DNASE2B|58511|deoxyribonuclease II beta##BC126138|DNASE2B|58511|deoxyribonuclease II beta##HQ258219|DNASE2B|58511|deoxyribonuclease II beta##BC037973|SAMD13|148418|sterile alpha motif domain containing 13##NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13##NM_025065|RPF1|80135|ribosome production factor 1 homolog (S. cerevisiae)##AK022537|RPF1|80135|ribosome production factor 1 homolog (S. cerevisiae)##BC016051|RPF1|80135|ribosome production factor 1 homolog (S. cerevisiae)##AF322053|RPF1|80135|ribosome production factor 1 homolog (S. cerevisiae)##AF493873|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##BT006823|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AF038955|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##BC003563|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5	0.835772	CTCF.p2:-1:0.836
chr17	48275727	48275840	reg1000439.p2	17.658	+	S67495 TSC_hg19_v1_chr17_-_48274424	-1370	-	Y15917 TSC_hg19_v1_chr17_-_48272117	-3738	-	X98707 TSC_hg19_v1_chr17_-_48271508	-4342	-	AB384988 DQ893571 EU176569 CU691368 M36546 X07884 AB209597 TSC_hg19_v1_chr17_-_48278986	3147	-	TSC_hg19_v1_chr17_-_48278993 BC036531 Z74615 NM_000088	3210	-	AY358204 NM_001168215	72983	+	DQ893571|COL1A1|1277|collagen, type I, alpha 1##EU176569|COL1A1|1277|collagen, type I, alpha 1##M36546|COL1A1|1277|collagen, type I, alpha 1##X07884|COL1A1|1277|collagen, type I, alpha 1##AB209597|COL1A1|1277|collagen, type I, alpha 1##BC036531|COL1A1|1277|collagen, type I, alpha 1##Z74615|COL1A1|1277|collagen, type I, alpha 1##NM_000088|COL1A1|1277|collagen, type I, alpha 1##AY358204|TMEM92|162461|transmembrane protein 92##NM_001168215|TMEM92|162461|transmembrane protein 92	0.522678	CTCF.p2:0:0.523
chr12	8147927	8148057	reg1000479.p1	17.656	+	CR457413 CU691674 DQ891118 DQ894297 DQ894299 AB209607 BC039196 AK304509 AK298673 AK312386 M20681 TSC_hg19_v1_chr12_-_8088888 NM_006931	-59226	-	AK299037 AK316238 TSC_hg19_v1_chr12_-_8043786	-104224	-	AK126026 AK122783 TSC_hg19_v1_chr12_-_8025469 AK302881 AF481878 BC060766 AF481879 NM_153449	-122526	-	TSC_hg19_v1_chr12_+_8185313 BC032608 NM_018416	37498	+	TSC_hg19_v1_chr12_-_8218956 U28488 AK290242 AK312458 BC020742 NM_004054 AK223388	70961	-	TSC_hg19_v1_chr12_-_8219032 U62027	71024	-	CR457413|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ891118|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894297|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894299|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AB209607|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##BC039196|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK304509|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK298673|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK312386|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##M20681|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##NM_006931|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK126026|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK122783|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK302881|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AF481878|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##BC060766|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AF481879|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##NM_153449|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##NM_018416|FOXJ2|55810|forkhead box J2##U28488|C3AR1|719|complement component 3a receptor 1##AK290242|C3AR1|719|complement component 3a receptor 1##AK312458|C3AR1|719|complement component 3a receptor 1##BC020742|C3AR1|719|complement component 3a receptor 1##NM_004054|C3AR1|719|complement component 3a receptor 1##AK223388|C3AR1|719|complement component 3a receptor 1##U62027|C3AR1|719|complement component 3a receptor 1	0.999942	CTCF.p2:11:1.000
chrX	9963933	9964071	reg1000670.p1	17.656	+	NM_001195081	-28605	+	BC140866 TSC_hg19_v1_chrX_+_9754543	-209459	+	TSC_hg19_v1_chrX_+_9754468 NM_001649 X83543	-209522	+	BC098455 NM_015691	19791	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	161052	+	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	571557	-	NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##BC140866|SHROOM2|357|shroom family member 2##NM_001649|SHROOM2|357|shroom family member 2##X83543|SHROOM2|357|shroom family member 2##BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)	0.995575	CTCF.p2:-25:0.996
chr1	24528472	24528617	reg1000810.p1	17.653	+	AF439325 AY129151 AY129152 AY129153 AB590083 AK160364 AJ534330 AJ534331 BC101407 BC101408 BC101975 BC139722 NM_170743 NM_173064 NM_173065 TSC_hg19_v1_chr1_-_24513772 BC140872	-14769	-	AB590595 CU688622 AF286095 TSC_hg19_v1_chr1_-_24469610 AK226001 BC029273 BC014096 AK308522 AK292204 AK313971 NM_021258	-58872	-	BX647453 BX647644 BX647455 NM_152372 BC067101	-89895	-	NM_198173 NM_198174 TSC_hg19_v1_chr1_+_24645846	117284	+	AK074386 TSC_hg19_v1_chr1_+_24645958 AK315164 BC036890 NM_001195010	117440	+	AY231160 AY231161 NM_021180	120985	+	AF439325|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129151|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129152|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129153|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AK160364|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AJ534330|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AJ534331|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101407|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101408|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101975|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC139722|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_170743|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_173064|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_173065|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC140872|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AF286095|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK226001|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC029273|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC014096|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK308522|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK292204|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK313971|IL22RA1|58985|interleukin 22 receptor, alpha 1##NM_021258|IL22RA1|58985|interleukin 22 receptor, alpha 1##BX647453|MYOM3|127294|myomesin family, member 3##BX647644|MYOM3|127294|myomesin family, member 3##BX647455|MYOM3|127294|myomesin family, member 3##NM_152372|MYOM3|127294|myomesin family, member 3##BC067101|MYOM3|127294|myomesin family, member 3##NM_198173|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_198174|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK074386|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK315164|GRHL3|57822|grainyhead-like 3 (Drosophila)##BC036890|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_001195010|GRHL3|57822|grainyhead-like 3 (Drosophila)##AY231160|GRHL3|57822|grainyhead-like 3 (Drosophila)##AY231161|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_021180|GRHL3|57822|grainyhead-like 3 (Drosophila)	0.975398	CTCF.p2:-15:0.975
chr2	148747502	148747653	reg1000582.p1	17.647	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	-144932	+	TSC_hg19_v1_chr2_+_148602300 AK314124	-145242	+	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	-145460	+	TSC_hg19_v1_chr2_-_148778310 AK225092 BC005388 AF022108 AF047598 AF132596 BC014847 AK295721 AK291989 AK294878 AK298862 NM_001190882 NM_001190879 AK299749 NM_002552 NM_001190881 NM_181741	30785	-	TSC_hg19_v1_chr2_+_148778636 NM_018328 EF542797	31032	+	NM_181742	31595	-	BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK225092|ORC4|5000|origin recognition complex, subunit 4##BC005388|ORC4|5000|origin recognition complex, subunit 4##AF022108|ORC4|5000|origin recognition complex, subunit 4##AF047598|ORC4|5000|origin recognition complex, subunit 4##AF132596|ORC4|5000|origin recognition complex, subunit 4##BC014847|ORC4|5000|origin recognition complex, subunit 4##AK295721|ORC4|5000|origin recognition complex, subunit 4##AK291989|ORC4|5000|origin recognition complex, subunit 4##AK294878|ORC4|5000|origin recognition complex, subunit 4##AK298862|ORC4|5000|origin recognition complex, subunit 4##NM_001190882|ORC4|5000|origin recognition complex, subunit 4##NM_001190879|ORC4|5000|origin recognition complex, subunit 4##AK299749|ORC4|5000|origin recognition complex, subunit 4##NM_002552|ORC4|5000|origin recognition complex, subunit 4##NM_001190881|ORC4|5000|origin recognition complex, subunit 4##NM_181741|ORC4|5000|origin recognition complex, subunit 4##NM_018328|MBD5|55777|methyl-CpG binding domain protein 5##EF542797|MBD5|55777|methyl-CpG binding domain protein 5##NM_181742|ORC4|5000|origin recognition complex, subunit 4	1.335615	CTCF.p2:34:0.695	CTCF.p2:-38:0.641
chr1	111326041	111326177	reg1000881.p1	17.646	+	TSC_hg19_v1_chr1_-_111217626 BC035059 NM_002232	-108469	-	TSC_hg19_v1_chr1_-_111217553 AK314009	-108565	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	-108757	-	NM_001040033 BC035456	87720	+	NM_000560 TSC_hg19_v1_chr1_+_111415769 AK313582 AK298723	89646	+	BC040693 TSC_hg19_v1_chr1_+_111415791 M37033 M60871	89693	+	BC035059|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##NM_002232|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##NM_001040033|CD53|963|CD53 molecule##BC035456|CD53|963|CD53 molecule##NM_000560|CD53|963|CD53 molecule##AK313582|CD53|963|CD53 molecule##AK298723|CD53|963|CD53 molecule##BC040693|CD53|963|CD53 molecule##M37033|CD53|963|CD53 molecule##M60871|CD53|963|CD53 molecule	0.361733	CTCF.p2:7:0.362
chr3	64470178	64470314	reg1000727.p1	17.640	+	BC119002 AL833539 NM_198859	-259126	-	AF530062 AB463196 TSC_hg19_v1_chr3_-_64009149 BC000630 AK095059 AY568086 D14663 NM_014814 BC012369 BC000904 AK290205 BX647742 AF215935	-461096	-	NM_001128149 AK310745 AK304062	-516789	+	AK057923 TSC_hg19_v1_chr3_+_64670789 BC040632	200545	+	AB037733 TSC_hg19_v1_chr3_-_64672299	202049	-	TSC_hg19_v1_chr3_-_64673334 AF261918 BC130578 BC171764 AF488803 NM_182920	203101	-	BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)##NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_001128149|ATXN7|6314|ataxin 7##AK310745|ATXN7|6314|ataxin 7##AK304062|ATXN7|6314|ataxin 7##AK057923|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##BC040632|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	0.974049	CTCF.p2:24:0.974
chr9	96827851	96827983	reg1001020.p1	17.640	+	TSC_hg19_v1_chr9_+_96793094 AY171233 NM_177995 BC067120 NM_001253830 BC051654	-34802	+	TSC_hg19_v1_chr9_-_96717638 BC064363	-110278	-	TSC_hg19_v1_chr9_-_96717589 AF213356 NM_021570	-110335	-	NM_001253829 NM_152422 TSC_hg19_v1_chr9_+_96846745 BC031279 AK310403 AK289692	18834	+	TSC_hg19_v1_chr9_+_96846806 AK124912	18897	+	TSC_hg19_v1_chr9_+_97021599 NM_194320 AK289742 AK093956	193673	+	AY171233|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_177995|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC067120|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253830|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC051654|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC064363|BARX1|56033|BARX homeobox 1##AF213356|BARX1|56033|BARX homeobox 1##NM_021570|BARX1|56033|BARX homeobox 1##NM_001253829|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_152422|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC031279|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK310403|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK289692|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK124912|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_194320|ZNF169|169841|zinc finger protein 169##AK289742|ZNF169|169841|zinc finger protein 169##AK093956|ZNF169|169841|zinc finger protein 169	0.920911	CTCF.p2:-5:0.921
chr7	65305556	65305690	reg1000592.p1	17.638	+	TSC_hg19_v1_chr7_-_65235746 BC066990	-69878	-	TSC_hg19_v1_chr7_+_65216060 BC052238 BC073761 BC122874 BC119782	-89540	+	TSC_hg19_v1_chr7_-_65215912 BX647963	-89705	-	TSC_hg19_v1_chr7_+_65338277 BC027734 NM_173517 BX647631 AY423045	32626	+	AK289522 TSC_hg19_v1_chr7_+_65338347	32722	+	TSC_hg19_v1_chr7_+_65338352 AK304077	32753	+	BC066990|LOC441242|441242|uncharacterized LOC441242##BC052238|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC073761|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC122874|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC119782|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC027734|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##NM_173517|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##BX647631|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##AY423045|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##AK289522|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##AK304077|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1	0.470306	CTCF.p2:8:0.470
chr2	219741471	219741589	reg1000631.p1	17.636	+	AY009401 NM_006522 AK075522 AB059570 DQ890770 BC004329 AB590154 BT007456	-16878	+	AJ249977 BC098102 BC098255 BC098277 BC098306 NM_017431 AK300078 AK300687 AK309865	-45012	-	X59812 TSC_hg19_v1_chr2_+_219646869 AK290418 M62401 BC040430 BC051851 AK310782 CU690866 AY178622	-94639	+	BC052234 AK024363 NM_025216 BC040026	3733	+	TSC_hg19_v1_chr2_+_219824381 BC041771 NM_003936 U34051	82879	+	BC023511 NM_017521 Y08976	108795	-	AY009401|WNT6|7475|wingless-type MMTV integration site family, member 6##NM_006522|WNT6|7475|wingless-type MMTV integration site family, member 6##AK075522|WNT6|7475|wingless-type MMTV integration site family, member 6##AB059570|WNT6|7475|wingless-type MMTV integration site family, member 6##DQ890770|WNT6|7475|wingless-type MMTV integration site family, member 6##BC004329|WNT6|7475|wingless-type MMTV integration site family, member 6##BT007456|WNT6|7475|wingless-type MMTV integration site family, member 6##AJ249977|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098102|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098255|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098277|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098306|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##NM_017431|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300078|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300687|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK309865|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC052234|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AK024363|WNT10A|80326|wingless-type MMTV integration site family, member 10A##NM_025216|WNT10A|80326|wingless-type MMTV integration site family, member 10A##BC040026|WNT10A|80326|wingless-type MMTV integration site family, member 10A##BC041771|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##NM_003936|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##U34051|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##BC023511|FEV|54738|FEV (ETS oncogene family)##NM_017521|FEV|54738|FEV (ETS oncogene family)##Y08976|FEV|54738|FEV (ETS oncogene family)	0.924124	CTCF.p2:-9:0.924
chr8	30776585	30776716	reg1000979.p1	17.630	+	AF285605 NM_031271 BC140934	-70081	-	TSC_hg19_v1_chr8_-_30670335 NM_001009552	-106299	-	TSC_hg19_v1_chr8_-_30670318 AK091875	-106338	-	BC106708 NM_013357	113666	-	NM_000553	114127	+	AF195513 AY077841 NM_001015508	114580	-	AF285605|TEX15|56154|testis expressed 15##NM_031271|TEX15|56154|testis expressed 15##BC140934|TEX15|56154|testis expressed 15##NM_001009552|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##AK091875|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##BC106708|PURG|29942|purine-rich element binding protein G##NM_013357|PURG|29942|purine-rich element binding protein G##NM_000553|WRN|7486|Werner syndrome, RecQ helicase-like##AF195513|PURG|29942|purine-rich element binding protein G##AY077841|PURG|29942|purine-rich element binding protein G##NM_001015508|PURG|29942|purine-rich element binding protein G	0.967559	CTCF.p2:-14:0.968
chrX	68047748	68047888	reg1000848.p1	17.629	+	TSC_hg19_v1_chrX_+_67913490 D80011	-134327	+	TSC_hg19_v1_chrX_+_67913480 AK291747 NM_001142504	-134338	+	BC035587 NM_001142503 NM_014725 CR749411	-180259	+	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	1037	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	337488	-	AF087142 NM_015686 BC136518 BC136519	677265	+	D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK291747|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142504|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##BC035587|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142503|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_014725|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##CR749411|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B	0.893657	CTCF.p2:-8:0.894
chr12	2049284	2049414	reg1000895.p1	17.627	+	BC150186 BX537436 BX537437 NM_172364 AF516695	-21448	-	TSC_hg19_v1_chr12_+_1929658 AK125402 AK095610 BC146894 BC146910 AK124687	-119590	+	NM_001039029 NM_001163925 NM_001163926	-119917	+	TSC_hg19_v1_chr12_-_2113622 AB463561 AK301109 AK056200 AK299203 BC043437 AY146652 NM_152640	64322	-	TSC_hg19_v1_chr12_+_2162452 NM_000719 NM_001129827 NM_001129829 NM_001129830 NM_001129831 NM_001129832 NM_001129833 NM_001129834 NM_001129835 NM_001129836 NM_001129837 NM_001129838 NM_001129839 NM_001129840 NM_001129841 NM_001129842 NM_001129843 NM_001129844 NM_001129846 NM_001167623 NM_001167624 NM_001167625 NM_199460 AK309111 AF465484 AK308652 BC146846	113145	+	AB209016 AJ224873 AY830711 AY830712 AY830713 Z34809 Z34810 Z34811 Z34812 Z34813 Z34814 Z34815 Z34816 Z34817 Z34818 Z34819 Z34820 Z34821 Z34822 Z74996 TSC_hg19_v1_chr12_+_2162753	113379	+	BC150186|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##BX537436|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##BX537437|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##NM_172364|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##AF516695|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##AK125402|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK095610|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##BC146894|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##BC146910|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK124687|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##NM_001039029|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##NM_001163925|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##NM_001163926|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK301109|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK056200|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK299203|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC043437|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AY146652|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_152640|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AB209016|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AJ224873|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830711|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830712|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830713|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34809|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34810|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34811|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34812|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34813|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34814|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34815|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34816|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34817|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34818|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34819|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34820|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34821|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34822|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z74996|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit	0.999734	CTCF.p2:6:1.000
chr3	66458303	66458438	reg1000485.p1	17.625	+	TSC_hg19_v1_chr3_+_66444897 AB075504	-13411	+	NM_001164796	-187203	+	AK092495 AX747571 NM_173471	-339086	+	AF381545 BC140907 NM_015541 AY730707	92482	-	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	93094	-	NM_032505 AK096640 AK300397	590358	+	NM_001164796|SLC25A26|115286|solute carrier family 25, member 26##AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8	0.999876	CTCF.p2:-5:1.000
chr12	8012644	8012777	reg1000712.p1	17.624	+	AK290896 TSC_hg19_v1_chr12_+_7942025 BC069807 BC098275 BC099704 EU446847 AY230262 AY578089	-70593	+	AB093576 AK022643 NM_024865 TSC_hg19_v1_chr12_+_7942016	-70705	+	AY151139 NM_001145465	-94899	+	AK126026 AK122783 TSC_hg19_v1_chr12_-_8025469 AK302881 AF481878 BC060766 AF481879 NM_153449	12756	-	AK299037 AK316238 TSC_hg19_v1_chr12_-_8043786	31058	-	CR457413 CU691674 DQ891118 DQ894297 DQ894299 AB209607 BC039196 AK304509 AK298673 AK312386 M20681 TSC_hg19_v1_chr12_-_8088888 NM_006931	76056	-	AK290896|NANOG|79923|Nanog homeobox##BC069807|NANOG|79923|Nanog homeobox##BC098275|NANOG|79923|Nanog homeobox##BC099704|NANOG|79923|Nanog homeobox##EU446847|NANOG|79923|Nanog homeobox##AY230262|NANOG|79923|Nanog homeobox##AY578089|NANOG|79923|Nanog homeobox##AB093576|NANOG|79923|Nanog homeobox##AK022643|NANOG|79923|Nanog homeobox##NM_024865|NANOG|79923|Nanog homeobox##AY151139|NANOGNB|360030|NANOG neighbor homeobox##NM_001145465|NANOGNB|360030|NANOG neighbor homeobox##AK126026|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK122783|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK302881|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AF481878|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##BC060766|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AF481879|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##NM_153449|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##CR457413|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ891118|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894297|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894299|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AB209607|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##BC039196|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK304509|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK298673|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK312386|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##M20681|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##NM_006931|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	0.999942	CTCF.p2:-5:1.000
chr14	62304429	62304568	reg1000870.p1	17.623	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	-75379	+	FJ790247 NM_001243084	-140159	+	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	-142308	+	AJ617628 NM_031914 BC117363 BC143598 HQ258344 AB102949	158140	+	TSC_hg19_v1_chr14_+_62584125 BX248751	279660	+	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	1207431	-	AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AJ617628|SYT16|83851|synaptotagmin XVI##NM_031914|SYT16|83851|synaptotagmin XVI##BC117363|SYT16|83851|synaptotagmin XVI##BC143598|SYT16|83851|synaptotagmin XVI##HQ258344|SYT16|83851|synaptotagmin XVI##AB102949|SYT16|83851|synaptotagmin XVI##BX248751|FLJ43390|646113|uncharacterized LOC646113##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5	0.997998	CTCF.p2:8:0.998
chr4	174179028	174179149	reg1000458.p2	17.609	+	BC040577 TSC_hg19_v1_chr4_-_174090813	-88281	-	BC043556 TSC_hg19_v1_chr4_-_174090314	-88778	-	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	-89136	+	Z17240 BT019782 BT019783 AB463732 DQ892288 DQ895487 NM_001130689 TSC_hg19_v1_chr4_-_174255014	75787	-	BC001063 BC100019 BC021054 TSC_hg19_v1_chr4_-_174255505 BC000903 AK311864 NM_001130688 NM_002129	76441	-	TSC_hg19_v1_chr4_+_174292088 NM_003864 AF055993	112975	+	NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##Z17240|HMGB2|3148|high mobility group box 2##BT019782|HMGB2|3148|high mobility group box 2##BT019783|HMGB2|3148|high mobility group box 2##DQ892288|HMGB2|3148|high mobility group box 2##DQ895487|HMGB2|3148|high mobility group box 2##NM_001130689|HMGB2|3148|high mobility group box 2##BC001063|HMGB2|3148|high mobility group box 2##BC100019|HMGB2|3148|high mobility group box 2##BC000903|HMGB2|3148|high mobility group box 2##AK311864|HMGB2|3148|high mobility group box 2##NM_001130688|HMGB2|3148|high mobility group box 2##NM_002129|HMGB2|3148|high mobility group box 2##NM_003864|SAP30|8819|Sin3A-associated protein, 30kDa##AF055993|SAP30|8819|Sin3A-associated protein, 30kDa	0.031738	
chr12	50101420	50101560	reg1000672.p1	17.607	+	TSC_hg19_v1_chr12_-_50101206 AB095934 BC159100 NM_175736 NM_198900	-278	-	TSC_hg19_v1_chr12_-_50101189 AK128195	-332	-	AB384661 TSC_hg19_v1_chr12_-_50101046	-480	-	NM_003217 TSC_hg19_v1_chr12_+_50135339 AK130050 AK225804 AK299587 AK304577	33828	+	TSC_hg19_v1_chr12_+_50135353 AK312238 BC000916 AF033095	33868	+	NM_001098576 AK124849	34102	+	AB095934|FMNL3|91010|formin-like 3##BC159100|FMNL3|91010|formin-like 3##NM_175736|FMNL3|91010|formin-like 3##NM_198900|FMNL3|91010|formin-like 3##AK128195|FMNL3|91010|formin-like 3##NM_003217|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK130050|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK225804|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK299587|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK304577|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK312238|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##BC000916|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AF033095|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##NM_001098576|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK124849|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6	0.200602	CTCF.p2:17:0.201
chr2	110303808	110303933	reg1000812.p1	17.607	+	NM_001099289 DQ307286	-557807	+	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	-698123	-	TSC_hg19_v1_chr2_-_109605623 AK296936	-698251	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	67611	-	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	67855	-	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	68075	+	NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##AK296936|EDAR|10913|ectodysplasin A receptor##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57	0.014952	
chrX	37684613	37684731	reg1000732.p1	17.604	+	TSC_hg19_v1_chrX_+_37639311 AK304033 AK301491 AK312929 AK301476 X04011 DQ890878 DQ894032	-45357	+	TSC_hg19_v1_chrX_+_37639284 NM_000397 AK289753 BC032720	-45402	+	AY534238 TSC_hg19_v1_chrX_+_37545043 BC036019 NM_021083 Z32684	-139602	+	CR450320 CR542213 TSC_hg19_v1_chrX_-_37706781 GQ129368 GQ129369	22104	-	BC000968 TSC_hg19_v1_chrX_-_37706825 AK311851 U02556 NM_006520	22180	-	AF049615 NM_012274 BC104428 BC104429 BC113024 BC113025	165408	+	AK304033|CYBB|1536|cytochrome b-245, beta polypeptide##AK301491|CYBB|1536|cytochrome b-245, beta polypeptide##AK312929|CYBB|1536|cytochrome b-245, beta polypeptide##AK301476|CYBB|1536|cytochrome b-245, beta polypeptide##X04011|CYBB|1536|cytochrome b-245, beta polypeptide##DQ890878|CYBB|1536|cytochrome b-245, beta polypeptide##DQ894032|CYBB|1536|cytochrome b-245, beta polypeptide##NM_000397|CYBB|1536|cytochrome b-245, beta polypeptide##AK289753|CYBB|1536|cytochrome b-245, beta polypeptide##BC032720|CYBB|1536|cytochrome b-245, beta polypeptide##AY534238|XK|7504|X-linked Kx blood group (McLeod syndrome)##BC036019|XK|7504|X-linked Kx blood group (McLeod syndrome)##NM_021083|XK|7504|X-linked Kx blood group (McLeod syndrome)##Z32684|XK|7504|X-linked Kx blood group (McLeod syndrome)##CR450320|DYNLT3|6990|dynein, light chain, Tctex-type 3##CR542213|DYNLT3|6990|dynein, light chain, Tctex-type 3##GQ129368|DYNLT3|6990|dynein, light chain, Tctex-type 3##GQ129369|DYNLT3|6990|dynein, light chain, Tctex-type 3##BC000968|DYNLT3|6990|dynein, light chain, Tctex-type 3##AK311851|DYNLT3|6990|dynein, light chain, Tctex-type 3##U02556|DYNLT3|6990|dynein, light chain, Tctex-type 3##NM_006520|DYNLT3|6990|dynein, light chain, Tctex-type 3##AF049615|CXorf27|25763|chromosome X open reading frame 27##NM_012274|CXorf27|25763|chromosome X open reading frame 27##BC104428|CXorf27|25763|chromosome X open reading frame 27##BC104429|CXorf27|25763|chromosome X open reading frame 27##BC113024|CXorf27|25763|chromosome X open reading frame 27##BC113025|CXorf27|25763|chromosome X open reading frame 27	0.953975	CTCF.p2:7:0.954
chr17	71366136	71366256	reg1000593.p1	17.602	+	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-58056	-	BC157870 NM_001129885	-108178	-	BC005005 TSC_hg19_v1_chr17_+_71229423	-136806	+	NM_001144952	274030	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	833619	+	TSC_hg19_v1_chr17_+_72199849 BC000603	833657	+	BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##BC005005|C17orf80|55028|chromosome 17 open reading frame 80##NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38	0.999951	CTCF.p2:11:1.000
chr12	123122503	123122631	reg1000695.p1	17.594	+	TSC_hg19_v1_chr12_+_123011806 BC055410 AK303337 BC150278 D79988 NM_014708	-110763	+	TSC_hg19_v1_chr12_-_123011521 BC008684 AK056114 BX640711 AK056256 BC067773 AB212664 AK094465 NM_023012	-111059	-	TSC_hg19_v1_chr12_-_122985537 AK027702 AK074638 NM_017612	-137049	-	AK290915 BC056419 AY148884 BC063461 BC027965 NM_177551	65305	-	AK290930 BC038955 AK313212 BC047891 D10923 NM_006018	78811	-	BC095506 AY507143 EU809458 GQ129267 GQ129268 AK313955 BC066881 BC066882 BC066883 BC067484 AF345568 AF385431 AF385432 NM_032554	92438	-	AK303337|KNTC1|9735|kinetochore associated 1##BC150278|KNTC1|9735|kinetochore associated 1##D79988|KNTC1|9735|kinetochore associated 1##NM_014708|KNTC1|9735|kinetochore associated 1##BC008684|RSRC2|65117|arginine/serine-rich coiled-coil 2##AK056114|RSRC2|65117|arginine/serine-rich coiled-coil 2##BX640711|RSRC2|65117|arginine/serine-rich coiled-coil 2##AK056256|RSRC2|65117|arginine/serine-rich coiled-coil 2##BC067773|RSRC2|65117|arginine/serine-rich coiled-coil 2##AB212664|RSRC2|65117|arginine/serine-rich coiled-coil 2##AK094465|RSRC2|65117|arginine/serine-rich coiled-coil 2##NM_023012|RSRC2|65117|arginine/serine-rich coiled-coil 2##AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8##AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8##NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8##AK290915|HCAR2|338442|hydroxycarboxylic acid receptor 2##BC056419|HCAR2|338442|hydroxycarboxylic acid receptor 2##AY148884|HCAR2|338442|hydroxycarboxylic acid receptor 2##BC063461|HCAR2|338442|hydroxycarboxylic acid receptor 2##BC027965|HCAR2|338442|hydroxycarboxylic acid receptor 2##NM_177551|HCAR2|338442|hydroxycarboxylic acid receptor 2##AK290930|HCAR3|8843|hydroxycarboxylic acid receptor 3##BC038955|HCAR3|8843|hydroxycarboxylic acid receptor 3##AK313212|HCAR3|8843|hydroxycarboxylic acid receptor 3##BC047891|HCAR3|8843|hydroxycarboxylic acid receptor 3##D10923|HCAR3|8843|hydroxycarboxylic acid receptor 3##NM_006018|HCAR3|8843|hydroxycarboxylic acid receptor 3##BC095506|HCAR1|27198|hydroxycarboxylic acid receptor 1##AY507143|HCAR1|27198|hydroxycarboxylic acid receptor 1##EU809458|HCAR1|27198|hydroxycarboxylic acid receptor 1##GQ129267|HCAR1|27198|hydroxycarboxylic acid receptor 1##GQ129268|HCAR1|27198|hydroxycarboxylic acid receptor 1##AK313955|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066881|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066882|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066883|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC067484|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF345568|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF385431|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF385432|HCAR1|27198|hydroxycarboxylic acid receptor 1##NM_032554|HCAR1|27198|hydroxycarboxylic acid receptor 1	0.09413	
chr17	12159850	12159965	reg1000465.p1	17.593	+	TSC_hg19_v1_chr17_+_11924150 BC036032 NM_003010 BC060764 AK131544 AK313053 U17743 AK294923 L36870 BC050386 AB590846 BT019676 CR536564	-235726	+	AK092656 AX747657 NM_144680 TSC_hg19_v1_chr17_-_11900782 AY491053 AK127908	-259154	-	NM_004662 X99947	-373687	+	NM_001146312 NM_153604 TSC_hg19_v1_chr17_+_12569210 AY764180	409302	+	AK128608 TSC_hg19_v1_chr17_+_12569334 AK292885	409414	+	TSC_hg19_v1_chr17_+_12569389 BC126307 BC143391 AF532596	409527	+	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4##NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4##U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4##L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4##CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK092656|ZNF18|7566|zinc finger protein 18##NM_144680|ZNF18|7566|zinc finger protein 18##AY491053|ZNF18|7566|zinc finger protein 18##AK127908|ZNF18|7566|zinc finger protein 18##NM_004662|DNAH9|1770|dynein, axonemal, heavy chain 9##X99947|DNAH9|1770|dynein, axonemal, heavy chain 9##NM_001146312|MYOCD|93649|myocardin##NM_153604|MYOCD|93649|myocardin##AY764180|MYOCD|93649|myocardin##AK128608|MYOCD|93649|myocardin##AK292885|MYOCD|93649|myocardin##BC126307|MYOCD|93649|myocardin##BC143391|MYOCD|93649|myocardin##AF532596|MYOCD|93649|myocardin	0.979185	CTCF.p2:-15:0.979
chr20	2153294	2153401	reg1000297.p1	17.592	+	TSC_hg19_v1_chr20_-_2083527 BC034792	-69821	-	BC140883 BC140884 TSC_hg19_v1_chr20_+_2083583 AB527968 AF195026 BC111573 BC017340 AK302629	-69832	+	GQ281297 NM_080836 AK314728	-70746	+	NM_003245 AK298637 AK299447 AK308249 AK290324 AK291351 AK315236 L10386 BC109075 BC109076	123302	+	AF540969 AF540970 NM_198994	208206	+	TSC_hg19_v1_chr20_-_2451416 X17568 X17567 BC080516	298043	-	BC140883|STK35|140901|serine/threonine kinase 35##BC140884|STK35|140901|serine/threonine kinase 35##AF195026|STK35|140901|serine/threonine kinase 35##BC111573|STK35|140901|serine/threonine kinase 35##BC017340|STK35|140901|serine/threonine kinase 35##AK302629|STK35|140901|serine/threonine kinase 35##GQ281297|STK35|140901|serine/threonine kinase 35##NM_080836|STK35|140901|serine/threonine kinase 35##AK314728|STK35|140901|serine/threonine kinase 35##NM_003245|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK298637|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK299447|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK308249|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK290324|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291351|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK315236|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##L10386|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109075|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109076|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AF540969|TGM6|343641|transglutaminase 6##AF540970|TGM6|343641|transglutaminase 6##NM_198994|TGM6|343641|transglutaminase 6##X17568|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##X17567|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##BC080516|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1	0.988811	CTCF.p2:30:0.989
chr11	74991334	74991455	reg1000542.p1	17.591	+	NM_001195528	-39445	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	-120553	+	NM_001145212 NM_007256 FM209050 TSC_hg19_v1_chr11_+_74862151 AK304783 AK302492 AK290234 AK300134 AB020687 BC127254 BC041095 AB026256 AL117465	-129250	+	AF084040 AF084940 FJ348262 CU678548 AB462955 TSC_hg19_v1_chr11_-_75062708 AK289718 BC003636 NM_004041 NM_020251	71422	-	TSC_hg19_v1_chr11_+_75110562 D28344 AK130960 BC034149 NM_001005 AK129794 AK313051 BC013231 BC100284 X55715 BC071917 AK223048 BC003137 BC071669 S42658 AB464166 CU678394 DQ892888 DQ896136 U14990 U14991 U14992 BC003577 BC013196 AB062288	119181	+	HQ258227 BC132708 BC132710 TSC_hg19_v1_chr11_-_75141083 AK091109 AX746783	149666	-	NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145212|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_007256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209050|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK304783|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK302492|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK290234|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK300134|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB020687|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC127254|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC041095|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB026256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AL117465|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF084040|ARRB1|408|arrestin, beta 1##AF084940|ARRB1|408|arrestin, beta 1##FJ348262|ARRB1|408|arrestin, beta 1##AK289718|ARRB1|408|arrestin, beta 1##BC003636|ARRB1|408|arrestin, beta 1##NM_004041|ARRB1|408|arrestin, beta 1##NM_020251|ARRB1|408|arrestin, beta 1##D28344|RPS3|6188|ribosomal protein S3##AK130960|RPS3|6188|ribosomal protein S3##BC034149|RPS3|6188|ribosomal protein S3##NM_001005|RPS3|6188|ribosomal protein S3##AK129794|RPS3|6188|ribosomal protein S3##AK313051|RPS3|6188|ribosomal protein S3##BC013231|RPS3|6188|ribosomal protein S3##BC100284|RPS3|6188|ribosomal protein S3##X55715|RPS3|6188|ribosomal protein S3##BC071917|RPS3|6188|ribosomal protein S3##AK223048|RPS3|6188|ribosomal protein S3##BC003137|RPS3|6188|ribosomal protein S3##BC071669|RPS3|6188|ribosomal protein S3##S42658|RPS3|6188|ribosomal protein S3##DQ892888|RPS3|6188|ribosomal protein S3##DQ896136|RPS3|6188|ribosomal protein S3##U14990|RPS3|6188|ribosomal protein S3##U14991|RPS3|6188|ribosomal protein S3##U14992|RPS3|6188|ribosomal protein S3##BC003577|RPS3|6188|ribosomal protein S3##BC013196|RPS3|6188|ribosomal protein S3##AB062288|RPS3|6188|ribosomal protein S3##HQ258227|KLHL35|283212|kelch-like 35 (Drosophila)##BC132708|KLHL35|283212|kelch-like 35 (Drosophila)##BC132710|KLHL35|283212|kelch-like 35 (Drosophila)##AK091109|KLHL35|283212|kelch-like 35 (Drosophila)	0.990381	CTCF.p2:-12:0.990
chr2	197162976	197163117	reg1000518.p2	17.590	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-126728	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-126767	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-229551	-	BC117194 BC117198 AB037722 NM_020760	294246	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	341311	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	501367	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.895386	CTCF.p2:-10:0.895
chr6	149753226	149753366	reg1000735.p1	17.588	+	AY340238 NM_001002255 BC130305 HQ258040	-31788	+	AK315038 NM_015093 AK307650	-113855	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	-114193	+	TSC_hg19_v1_chr6_-_149806031 AK127932	52771	-	TSC_hg19_v1_chr6_-_149806151 AB458221 AB458222 BC157832 NM_207360	52847	-	TSC_hg19_v1_chr6_-_149867153 CU676802 GQ129364 GQ129365 BC064134	113848	-	AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK127932|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AB458221|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AB458222|ZC3H12D|340152|zinc finger CCCH-type containing 12D##BC157832|ZC3H12D|340152|zinc finger CCCH-type containing 12D##NM_207360|ZC3H12D|340152|zinc finger CCCH-type containing 12D##GQ129364|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##GQ129365|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC064134|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4	0.687102	CTCF.p2:18:0.687
chr6	37140047	37140173	reg1000492.p1	17.587	+	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	-1988	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-166609	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-185840	-	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	85276	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	85489	+	TSC_hg19_v1_chr6_-_37225916 BC009625 NM_001162900	85817	-	NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B##BC009625|TMEM217|221468|transmembrane protein 217##NM_001162900|TMEM217|221468|transmembrane protein 217	0.994721	CTCF.p2:20:0.995
chr1	6403610	6403721	reg1000535.p1	17.586	+	BC068275 NM_207370 TSC_hg19_v1_chr1_-_6321125	-82582	-	NM_001024598	-99414	+	TSC_hg19_v1_chr1_-_6296121 NM_012405	-107557	-	AB074419 AK291583 NM_181866	15319	-	AB074418 AK292202 NM_181865 AK304465	17077	-	AK290097 AB074417 NM_181864	42144	-	BC068275|GPR153|387509|G protein-coupled receptor 153##NM_207370|GPR153|387509|G protein-coupled receptor 153##NM_001024598|HES3|390992|hairy and enhancer of split 3 (Drosophila)##NM_012405|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##AB074419|ACOT7|11332|acyl-CoA thioesterase 7##AK291583|ACOT7|11332|acyl-CoA thioesterase 7##NM_181866|ACOT7|11332|acyl-CoA thioesterase 7##AB074418|ACOT7|11332|acyl-CoA thioesterase 7##AK292202|ACOT7|11332|acyl-CoA thioesterase 7##NM_181865|ACOT7|11332|acyl-CoA thioesterase 7##AK290097|ACOT7|11332|acyl-CoA thioesterase 7##AB074417|ACOT7|11332|acyl-CoA thioesterase 7##NM_181864|ACOT7|11332|acyl-CoA thioesterase 7	0.744676	CTCF.p2:8:0.745
chr17	32527087	32527200	reg1000519.p1	17.577	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	-43456	-	AL834182 NM_183377	-907138	-	AF216311 NM_173847 BC100886 BC100887	-1208241	+	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	55188	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	70130	+	NM_002986 BC017850 Z69291 Z75668 U46573 Z75669 DQ891969 DQ895158 AB463482 CR457421	85613	+	EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7##NM_002986|CCL11|6356|chemokine (C-C motif) ligand 11##BC017850|CCL11|6356|chemokine (C-C motif) ligand 11##Z69291|CCL11|6356|chemokine (C-C motif) ligand 11##Z75668|CCL11|6356|chemokine (C-C motif) ligand 11##U46573|CCL11|6356|chemokine (C-C motif) ligand 11##Z75669|CCL11|6356|chemokine (C-C motif) ligand 11##DQ891969|CCL11|6356|chemokine (C-C motif) ligand 11##DQ895158|CCL11|6356|chemokine (C-C motif) ligand 11##CR457421|CCL11|6356|chemokine (C-C motif) ligand 11	1.308145	CTCF.p2:16:0.444	CTCF.p2:-32:0.865
chr6	123160747	123160870	reg1000552.p1	17.577	+	TSC_hg19_v1_chr6_+_123110402 AK000184 BC018999 BC066591 AK301365 DQ892207 DQ895402 CU676352	-50391	+	NM_006714	-50838	+	AK311867 TSC_hg19_v1_chr6_+_123100861 AK289836 AK307272 AJ002962 AB208815 U51338 D50373 D88648 AL512688 U81235 CR457057 DQ891437 DQ894613 EU176601	-59909	+	TSC_hg19_v1_chr6_+_123317379 AK295158	156575	+	BC101377 BC101376 NM_001010852	156772	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	797281	-	AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK311867|FABP7|2173|fatty acid binding protein 7, brain##AK289836|FABP7|2173|fatty acid binding protein 7, brain##AJ002962|FABP7|2173|fatty acid binding protein 7, brain##U51338|FABP7|2173|fatty acid binding protein 7, brain##D50373|FABP7|2173|fatty acid binding protein 7, brain##D88648|FABP7|2173|fatty acid binding protein 7, brain##AL512688|FABP7|2173|fatty acid binding protein 7, brain##U81235|FABP7|2173|fatty acid binding protein 7, brain##CR457057|FABP7|2173|fatty acid binding protein 7, brain##DQ891437|FABP7|2173|fatty acid binding protein 7, brain##DQ894613|FABP7|2173|fatty acid binding protein 7, brain##EU176601|FABP7|2173|fatty acid binding protein 7, brain##AK295158|CLVS2|134829|clavesin 2##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin	0.998233	CTCF.p2:-1:0.998
chr15	20561757	20561889	reg1000975.p1	17.575	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	149614	-	NM_001145004	185290	-	NM_207355 BC066981	510155	-	BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B	0.996738	CTCF.p2:-12:0.997
chr17	36648403	36648511	reg1000507.p1	17.574	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	-63752	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	-140594	+	AY584611 NM_001004334	-148765	-	TSC_hg19_v1_chr17_-_36729122 AK295027	80665	-	BC029278 TSC_hg19_v1_chr17_-_36760969	112481	-	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	113739	-	NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1	1.704459	CTCF.p2:-28:1.000	CTCF.p2:30:0.613
chr5	148110620	148110759	reg1000474.p1	17.573	+	AK308471 TSC_hg19_v1_chr5_-_148034091	-76599	-	AJ131724 TSC_hg19_v1_chr5_-_148033739 NM_000870	-76962	-	AJ633645 AM712912 Y10437 Y13584 AJ011371 BC095497 Y09586 AJ131725 AJ131726 AJ278979 AJ278980 AJ278981 AJ278982 Y08756 Y12505 Y12506 Y12507 AJ519673 BC074755 NM_001040169 NM_001040172 NM_001040173 NM_199453	-94090	-	NM_000024 TSC_hg19_v1_chr5_+_148206185 AK313151 BC012481 AK223025 BC073856 BC063486 X04827	95497	+	AB075865 AL832651 AK300420 TSC_hg19_v1_chr5_-_148442626 BC113879 BC114486 AY341075 AB070620 NM_024577	331982	-	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	410501	+	AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131724|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000870|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface##X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface##AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3	0.94555	CTCF.p2:-21:0.928
chr1	229797131	229797262	reg1000888.p1	17.570	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-35182	+	AK291013 TSC_hg19_v1_chr1_+_229761973 D50923 NM_014777 BC059381	-35222	+	NM_001025247 NM_014409 TSC_hg19_v1_chr1_-_229761804	-35398	-	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	405746	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	405800	+	BC150638 NM_024554	716194	-	BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##AK291013|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##D50923|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_014777|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC059381|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_001025247|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_014409|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5	0.107992	
chr16	57553779	57553913	reg1001071.p1	17.569	+	BC003541 TSC_hg19_v1_chr16_-_57520403 NM_018110 AK001350	-33461	-	TSC_hg19_v1_chr16_+_57496590 BC003159 AK300124 AK293112 BC028157 AJ224143 AJ224144 J05448 BC000409 AB464040 AF008443 CR542041 DQ891411 DQ894586 EU176305	-57241	+	TSC_hg19_v1_chr16_+_57496570 AK295582	-57275	+	BC008285 BC009941 NM_033212	16619	-	TSC_hg19_v1_chr16_+_57576554 AK303661 AK292783 AK160368 AY358447 AK301357	22708	+	TSC_hg19_v1_chr16_+_57576577 BC032401 NM_153837	22742	+	BC003541|DOK4|55715|docking protein 4##NM_018110|DOK4|55715|docking protein 4##AK001350|DOK4|55715|docking protein 4##BC003159|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AK300124|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AK293112|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##BC028157|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AJ224143|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AJ224144|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##J05448|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##BC000409|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AF008443|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##CR542041|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##DQ891411|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##DQ894586|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##EU176305|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##BC008285|CCDC102A|92922|coiled-coil domain containing 102A##BC009941|CCDC102A|92922|coiled-coil domain containing 102A##NM_033212|CCDC102A|92922|coiled-coil domain containing 102A##AK303661|GPR114|221188|G protein-coupled receptor 114##AK292783|GPR114|221188|G protein-coupled receptor 114##AK160368|GPR114|221188|G protein-coupled receptor 114##AY358447|GPR114|221188|G protein-coupled receptor 114##AK301357|GPR114|221188|G protein-coupled receptor 114##BC032401|GPR114|221188|G protein-coupled receptor 114##NM_153837|GPR114|221188|G protein-coupled receptor 114	0.99973	CTCF.p2:9:1.000
chr6	35705422	35705558	reg1000820.p1	17.564	+	AK058119 BC033033 NM_145028	-632	+	BC042605 NM_001145775	-9131	-	TSC_hg19_v1_chr6_-_35656693 BC111050 AK222807 AK302704 AK303356 AK312422 BX647390 NM_001145776 AF194172 U71321 NM_001145777 NM_004117	-48784	-	AY358823 NM_207409	38901	+	DQ823638 BC150543 BC150544 BC133046 BC137392 NM_001010886	43335	+	AY780648 AY780649 BT006812 BC025693 J02883 BC043489 BC007061 BC017897 NM_001252597 NM_001252598 NM_001832	59598	-	AK058119|C6orf81|221481|chromosome 6 open reading frame 81##BC033033|C6orf81|221481|chromosome 6 open reading frame 81##NM_145028|C6orf81|221481|chromosome 6 open reading frame 81##BC042605|FKBP5|2289|FK506 binding protein 5##NM_001145775|FKBP5|2289|FK506 binding protein 5##BC111050|FKBP5|2289|FK506 binding protein 5##AK222807|FKBP5|2289|FK506 binding protein 5##AK302704|FKBP5|2289|FK506 binding protein 5##AK303356|FKBP5|2289|FK506 binding protein 5##AK312422|FKBP5|2289|FK506 binding protein 5##BX647390|FKBP5|2289|FK506 binding protein 5##NM_001145776|FKBP5|2289|FK506 binding protein 5##AF194172|FKBP5|2289|FK506 binding protein 5##U71321|FKBP5|2289|FK506 binding protein 5##NM_001145777|FKBP5|2289|FK506 binding protein 5##NM_004117|FKBP5|2289|FK506 binding protein 5##AY358823|C6orf126|389383|chromosome 6 open reading frame 126##NM_207409|C6orf126|389383|chromosome 6 open reading frame 126##DQ823638|C6orf127|340204|chromosome 6 open reading frame 127##BC150543|C6orf127|340204|chromosome 6 open reading frame 127##BC150544|C6orf127|340204|chromosome 6 open reading frame 127##BC133046|C6orf127|340204|chromosome 6 open reading frame 127##BC137392|C6orf127|340204|chromosome 6 open reading frame 127##NM_001010886|C6orf127|340204|chromosome 6 open reading frame 127##AY780648|CLPS|1208|colipase, pancreatic##AY780649|CLPS|1208|colipase, pancreatic##BT006812|CLPS|1208|colipase, pancreatic##BC025693|CLPS|1208|colipase, pancreatic##J02883|CLPS|1208|colipase, pancreatic##BC043489|CLPS|1208|colipase, pancreatic##BC007061|CLPS|1208|colipase, pancreatic##BC017897|CLPS|1208|colipase, pancreatic##NM_001252597|CLPS|1208|colipase, pancreatic##NM_001252598|CLPS|1208|colipase, pancreatic##NM_001832|CLPS|1208|colipase, pancreatic	1.118281	CTCF.p2:8:0.989
chr22	40019006	40019151	reg1001059.p1	17.560	+	AF129133 AF142567 AF211189 AF393329 NM_001003406 NM_021096	-52321	+	TSC_hg19_v1_chr22_-_39928773 CR456443 BC037573 NM_194326	-90264	-	BC047711 TSC_hg19_v1_chr22_-_39928752 AK025423	-90327	-	BC033895 NM_152512	270715	-	AY069959 NM_004810 TSC_hg19_v1_chr22_+_40297087 AK303332 AK303512 AF236119 AJ011736 BC025692 AF042380 AF102694	278046	+	TSC_hg19_v1_chr22_+_40297183 AF129476 AF090456 CR456498 Y18051	278169	+	AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##CR456443|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC037573|RPS19BP1|91582|ribosomal protein S19 binding protein 1##NM_194326|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC047711|RPS19BP1|91582|ribosomal protein S19 binding protein 1##AK025423|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC033895|ENTHD1|150350|ENTH domain containing 1##NM_152512|ENTHD1|150350|ENTH domain containing 1##AY069959|GRAP2|9402|GRB2-related adaptor protein 2##NM_004810|GRAP2|9402|GRB2-related adaptor protein 2##AK303332|GRAP2|9402|GRB2-related adaptor protein 2##AK303512|GRAP2|9402|GRB2-related adaptor protein 2##AF236119|GRAP2|9402|GRB2-related adaptor protein 2##AJ011736|GRAP2|9402|GRB2-related adaptor protein 2##BC025692|GRAP2|9402|GRB2-related adaptor protein 2##AF042380|GRAP2|9402|GRB2-related adaptor protein 2##AF102694|GRAP2|9402|GRB2-related adaptor protein 2##AF129476|GRAP2|9402|GRB2-related adaptor protein 2##AF090456|GRAP2|9402|GRB2-related adaptor protein 2##CR456498|GRAP2|9402|GRB2-related adaptor protein 2##Y18051|GRAP2|9402|GRB2-related adaptor protein 2	0.999605	CTCF.p2:-18:1.000
chr3	42485440	42485562	reg1000817.p1	17.560	+	AF326749 BC016747 NM_144634	-33458	-	BC111026 NM_000729	-177840	-	BC008283 NM_001174138	-180063	-	AK056819 NM_001251882	45289	+	TSC_hg19_v1_chr3_+_42544108 AK294609 NM_001251883 NM_001251884 NM_001251885 NM_004624 AK293548	58606	+	TSC_hg19_v1_chr3_+_42544134 AK298115 AK314334 L13288 BC064424 X75299 AB590664 EF577396	58678	+	AF326749|LYZL4|131375|lysozyme-like 4##BC016747|LYZL4|131375|lysozyme-like 4##NM_144634|LYZL4|131375|lysozyme-like 4##BC111026|CCK|885|cholecystokinin##NM_000729|CCK|885|cholecystokinin##BC008283|CCK|885|cholecystokinin##NM_001174138|CCK|885|cholecystokinin##AK056819|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251882|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK294609|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251883|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251884|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251885|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_004624|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK293548|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK298115|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK314334|VIPR1|7433|vasoactive intestinal peptide receptor 1##L13288|VIPR1|7433|vasoactive intestinal peptide receptor 1##BC064424|VIPR1|7433|vasoactive intestinal peptide receptor 1##X75299|VIPR1|7433|vasoactive intestinal peptide receptor 1##EF577396|VIPR1|7433|vasoactive intestinal peptide receptor 1	0.999006	CTCF.p2:8:0.999
chr7	73831856	73831985	reg1000790.p1	17.558	+	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	-128133	+	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	-163184	-	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	-163209	-	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	36244	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	36388	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	36515	+	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1	0.98254	CTCF.p2:-20:0.983
chr22	46763653	46763759	reg1000530.p2	17.556	+	TSC_hg19_v1_chr22_+_46731810 AK303020	-31896	+	TSC_hg19_v1_chr22_+_46731615 AB178028 AK001002 AK295173 AK290712 BC066593 BC080631 CR456445 BC027991 BC012076 AB463324 CU013043 CU013331	-32077	+	NM_018006 AY062123 DQ309998 DQ309999 DQ310000	-32397	+	AF231024 NM_014246 TSC_hg19_v1_chr22_-_46933142	169408	-	CR456470 NM_015124 BC129837 AB463563 CU013020 CU013308	258970	+	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	370373	-	AK303020|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AB178028|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK001002|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK295173|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK290712|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC066593|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC080631|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456445|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC027991|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC012076|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013043|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013331|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##NM_018006|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AY062123|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ309998|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ309999|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ310000|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AF231024|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##NM_014246|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##CR456470|GRAMD4|23151|GRAM domain containing 4##NM_015124|GRAMD4|23151|GRAM domain containing 4##BC129837|GRAMD4|23151|GRAM domain containing 4##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase	0.135051	
chr13	97762290	97762423	reg1000692.p1	17.550	+	AK122639 NM_080818 AK313684	-115744	-	AF539426 NM_153456	-1019264	+	CU688350 TSC_hg19_v1_chr13_-_96705666 BC125233 BC125234 AF227906 BC017759 BC067807 BC111021 AK001735 BC032302 NM_020121	-1056706	-	TSC_hg19_v1_chr13_+_97794087 CR749802	31726	+	TSC_hg19_v1_chr13_+_97874586 AK074610 NM_144778 NM_207304 AK291727 AF061261 AF491866 BC032426 BC104038 BC104039 BC104040 AK315844	112239	+	TSC_hg19_v1_chr13_+_97874708 BC020418	112358	+	AK122639|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##NM_080818|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AK313684|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##BC125233|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC125234|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF227906|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC017759|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC067807|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC111021|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AK001735|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC032302|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##NM_020121|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_144778|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_207304|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK291727|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF061261|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF491866|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC032426|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104038|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104039|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104040|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK315844|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC020418|MBNL2|10150|muscleblind-like 2 (Drosophila)	0.999506	CTCF.p2:-16:1.000
chr1	12269018	12269152	reg1001016.p1	17.548	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	-41974	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	-42024	+	D86042 BC063482 NM_152942 BC073839 BC141804	-83069	+	TSC_hg19_v1_chr1_+_12290088 NM_015378 NM_018156 AJ608774 AJ608775 AL162331	21022	+	TSC_hg19_v1_chr1_+_12403045 AK057675	133985	+	DQ426869 DQ893006 DQ896252 CU678154 AF061741 AK222593 BC002730 TSC_hg19_v1_chr1_-_12677700 AK310202 AY358093 AK309282 AK312961 BX648476 NM_004753	408498	-	AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_015378|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_018156|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608774|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608775|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AL162331|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AK057675|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	0.984346	CTCF.p2:8:0.984
chr10	24283548	24283670	reg1000753.p1	17.539	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	-299932	+	AB188491 NM_001145373 TSC_hg19_v1_chr10_+_23728216	-555399	+	BC035732 NM_153714	-649838	-	AK091142 AX746804 NM_001098501 NM_019590 TSC_hg19_v1_chr10_+_24497850	214179	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	214485	+	TSC_hg19_v1_chr10_+_24755441 AK300422	471835	+	AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217##AB188491|OTUD1|220213|OTU domain containing 1##NM_001145373|OTUD1|220213|OTU domain containing 1##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67##AK091142|KIAA1217|56243|KIAA1217##NM_001098501|KIAA1217|56243|KIAA1217##NM_019590|KIAA1217|56243|KIAA1217##AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217	0.997731	CTCF.p2:-20:0.998
chr15	44196101	44196242	reg1001005.p1	17.539	+	NM_001167941 NM_024908 TSC_hg19_v1_chr15_+_44119199 AK290933 BC025247 AK023035 BC051855 EF011624 CU690868	-76984	+	AB463886 CU690792 DQ893389 DQ896709 TSC_hg19_v1_chr15_-_44116882 U04209 BC023557 BC050742 AK312867 NM_005926	-79313	-	TSC_hg19_v1_chr15_+_44092806 AK022435 AF161485 AF049613	-103369	+	BC043486 CU691018 BC007796 BC053647 NM_032892 TSC_hg19_v1_chr15_-_44487448	291179	-	AK090572 AX746516 TSC_hg19_v1_chr15_-_44487470	291298	-	TSC_hg19_v1_chr15_+_44580919 NM_138423 NM_177974 BC012124	384728	+	NM_001167941|WDR76|79968|WD repeat domain 76##NM_024908|WDR76|79968|WD repeat domain 76##AK290933|WDR76|79968|WD repeat domain 76##BC025247|WDR76|79968|WD repeat domain 76##AK023035|WDR76|79968|WD repeat domain 76##BC051855|WDR76|79968|WD repeat domain 76##EF011624|WDR76|79968|WD repeat domain 76##DQ893389|MFAP1|4236|microfibrillar-associated protein 1##DQ896709|MFAP1|4236|microfibrillar-associated protein 1##U04209|MFAP1|4236|microfibrillar-associated protein 1##BC023557|MFAP1|4236|microfibrillar-associated protein 1##BC050742|MFAP1|4236|microfibrillar-associated protein 1##AK312867|MFAP1|4236|microfibrillar-associated protein 1##NM_005926|MFAP1|4236|microfibrillar-associated protein 1##AK022435|C15orf63|25764|chromosome 15 open reading frame 63##AF161485|C15orf63|25764|chromosome 15 open reading frame 63##AF049613|C15orf63|25764|chromosome 15 open reading frame 63##BC043486|FRMD5|84978|FERM domain containing 5##BC007796|FRMD5|84978|FERM domain containing 5##BC053647|FRMD5|84978|FERM domain containing 5##NM_032892|FRMD5|84978|FERM domain containing 5##AK090572|FRMD5|84978|FERM domain containing 5##NM_138423|CASC4|113201|cancer susceptibility candidate 4##NM_177974|CASC4|113201|cancer susceptibility candidate 4##BC012124|CASC4|113201|cancer susceptibility candidate 4	0.978423	CTCF.p2:-10:0.978
chrX	104166954	104167083	reg1000502.p1	17.537	+	TSC_hg19_v1_chrX_+_103810991 AJ272208 NM_017416	-356026	+	AK290196 TSC_hg19_v1_chrX_+_103810879	-356139	+	BC042633 AY114148 BC053599 NM_153448 AK097704	-667432	-	BC108734 AF285597 BC042547 NM_031274	298335	-	TSC_hg19_v1_chrX_+_105066535 BX538345 NM_198465 BC108702	899520	+	TSC_hg19_v1_chrX_+_105066559 AK131549	899548	+	AJ272208|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##NM_017416|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##AK290196|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##BC042633|ESX1|80712|ESX homeobox 1##AY114148|ESX1|80712|ESX homeobox 1##BC053599|ESX1|80712|ESX homeobox 1##NM_153448|ESX1|80712|ESX homeobox 1##AK097704|ESX1|80712|ESX homeobox 1##BC108734|TEX13A|56157|testis expressed 13A##AF285597|TEX13A|56157|testis expressed 13A##BC042547|TEX13A|56157|testis expressed 13A##NM_031274|TEX13A|56157|testis expressed 13A##BX538345|NRK|203447|Nik related kinase##NM_198465|NRK|203447|Nik related kinase##BC108702|NRK|203447|Nik related kinase##AK131549|NRK|203447|Nik related kinase	1.863139	CTCF.p2:25:0.999	CTCF.p2:-63:0.865
chr11	4658251	4658366	reg1000838.p1	17.533	+	AK301120 TSC_hg19_v1_chr11_-_4629404 AK310888 AK291166 BC109063 AF360739 AL832730 AK056523 NM_018073	-28874	-	AB463977 NM_001005169	-43040	+	BC136921 BC151144 NM_001005170	-50288	+	BC140717 NM_001004751	2636	+	BC022401 NM_152430 AL833127 AY698056	6875	+	BC020768 AY033942 AK314051 NM_030774	60703	-	AK301120|TRIM68|55128|tripartite motif containing 68##AK310888|TRIM68|55128|tripartite motif containing 68##AK291166|TRIM68|55128|tripartite motif containing 68##BC109063|TRIM68|55128|tripartite motif containing 68##AF360739|TRIM68|55128|tripartite motif containing 68##AL832730|TRIM68|55128|tripartite motif containing 68##AK056523|TRIM68|55128|tripartite motif containing 68##NM_018073|TRIM68|55128|tripartite motif containing 68##NM_001005169|OR52I1|390037|olfactory receptor, family 52, subfamily I, member 1##BC136921|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##BC151144|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##NM_001005170|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##BC140717|OR51D1|390038|olfactory receptor, family 51, subfamily D, member 1##NM_001004751|OR51D1|390038|olfactory receptor, family 51, subfamily D, member 1##BC022401|OR51E1|143503|olfactory receptor, family 51, subfamily E, member 1##NM_152430|OR51E1|143503|olfactory receptor, family 51, subfamily E, member 1##AL833127|OR51E1|143503|olfactory receptor, family 51, subfamily E, member 1##AY698056|OR51E1|143503|olfactory receptor, family 51, subfamily E, member 1##BC020768|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2##AY033942|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2##AK314051|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2##NM_030774|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2	0.999442	CTCF.p2:-1:0.999
chr1	205498202	205498326	reg1000887.p2	17.533	+	AY353237 AY353240 TSC_hg19_v1_chr1_+_205473802 AY353238 BC011526 AY353239	-24442	+	NM_002596 NM_212502 NM_212503 TSC_hg19_v1_chr1_+_205473688 AK293756 AK296320 AK295654	-24559	+	AB084764 AB084765 AB085610 AB096677 AB096678 AB096679 AB096680 AB096681 AB096682 BC036636 AK302392 NM_001001552 NM_001199050 NM_001199051 NM_001199052	-107068	-	AK293816 NM_181644 TSC_hg19_v1_chr1_+_205538141	39863	+	BC036549 AK091896 AX747240 TSC_hg19_v1_chr1_+_205538184 AK304120 AK090831 AX746641 AK295148	39949	+	BC063676 M85164 M85165 TSC_hg19_v1_chr1_-_205601025 BC040145	102642	-	AY353237|CDK18|5129|cyclin-dependent kinase 18##AY353240|CDK18|5129|cyclin-dependent kinase 18##AY353238|CDK18|5129|cyclin-dependent kinase 18##BC011526|CDK18|5129|cyclin-dependent kinase 18##AY353239|CDK18|5129|cyclin-dependent kinase 18##NM_002596|CDK18|5129|cyclin-dependent kinase 18##NM_212502|CDK18|5129|cyclin-dependent kinase 18##NM_212503|CDK18|5129|cyclin-dependent kinase 18##AK293756|CDK18|5129|cyclin-dependent kinase 18##AK296320|CDK18|5129|cyclin-dependent kinase 18##AK295654|CDK18|5129|cyclin-dependent kinase 18##AB084764|LEMD1|93273|LEM domain containing 1##AB084765|LEMD1|93273|LEM domain containing 1##AB085610|LEMD1|93273|LEM domain containing 1##AB096677|LEMD1|93273|LEM domain containing 1##AB096678|LEMD1|93273|LEM domain containing 1##AB096679|LEMD1|93273|LEM domain containing 1##AB096680|LEMD1|93273|LEM domain containing 1##AB096681|LEMD1|93273|LEM domain containing 1##AB096682|LEMD1|93273|LEM domain containing 1##BC036636|LEMD1|93273|LEM domain containing 1##AK302392|LEMD1|93273|LEM domain containing 1##NM_001001552|LEMD1|93273|LEM domain containing 1##NM_001199050|LEMD1|93273|LEM domain containing 1##NM_001199051|LEMD1|93273|LEM domain containing 1##NM_001199052|LEMD1|93273|LEM domain containing 1##AK293816|MFSD4|148808|major facilitator superfamily domain containing 4##NM_181644|MFSD4|148808|major facilitator superfamily domain containing 4##BC036549|MFSD4|148808|major facilitator superfamily domain containing 4##AK091896|MFSD4|148808|major facilitator superfamily domain containing 4##AK304120|MFSD4|148808|major facilitator superfamily domain containing 4##AK090831|MFSD4|148808|major facilitator superfamily domain containing 4##AK295148|MFSD4|148808|major facilitator superfamily domain containing 4##BC063676|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85164|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85165|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC040145|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)	0.999614	CTCF.p2:-3:1.000
chr3	183100293	183100421	reg1000409.p1	17.523	+	TSC_hg19_v1_chr3_+_182971608 AK091474 AX747008	-128751	+	AB209517 TSC_hg19_v1_chr3_+_182971343	-129079	+	TSC_hg19_v1_chr3_+_182970969 NM_032047 AK074424	-129409	+	NM_015078 BC064632 AK124500 AK310962	45582	-	TSC_hg19_v1_chr3_+_183165436 AK057000	65073	+	AF441792 CU689348 DQ894788 EU176275 TSC_hg19_v1_chr3_-_183273495 AK097125 AK314473 BX648370 BC032348 NM_130446	173095	-	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK057000|LOC100505687|100505687|uncharacterized LOC100505687##AF441792|KLHL6|89857|kelch-like 6 (Drosophila)##DQ894788|KLHL6|89857|kelch-like 6 (Drosophila)##EU176275|KLHL6|89857|kelch-like 6 (Drosophila)##AK097125|KLHL6|89857|kelch-like 6 (Drosophila)##AK314473|KLHL6|89857|kelch-like 6 (Drosophila)##BX648370|KLHL6|89857|kelch-like 6 (Drosophila)##BC032348|KLHL6|89857|kelch-like 6 (Drosophila)##NM_130446|KLHL6|89857|kelch-like 6 (Drosophila)	0.908244	CTCF.p2:19:0.908
chr2	28675470	28675598	reg1001067.p1	17.522	+	TSC_hg19_v1_chr2_+_28616369 AK315415 X16706 AB528427 CU692714 DQ893428 DQ896743 CR542262	-59061	+	TSC_hg19_v1_chr2_+_28616346 BC022791	-59184	+	TSC_hg19_v1_chr2_+_28615779 NM_005253	-59752	+	BC150633 NM_001170585 NM_153021 BC153864	43427	+	TSC_hg19_v1_chr2_+_28824770 BC042674	149249	+	TSC_hg19_v1_chr2_+_28974719 AK303682 AK295957 AK316532 NM_206876 NM_002709 BX647970 AK312329 BX647295 X80910	299140	+	AK315415|FOSL2|2355|FOS-like antigen 2##X16706|FOSL2|2355|FOS-like antigen 2##DQ893428|FOSL2|2355|FOS-like antigen 2##DQ896743|FOSL2|2355|FOS-like antigen 2##CR542262|FOSL2|2355|FOS-like antigen 2##BC022791|FOSL2|2355|FOS-like antigen 2##NM_005253|FOSL2|2355|FOS-like antigen 2##BC150633|PLB1|151056|phospholipase B1##NM_001170585|PLB1|151056|phospholipase B1##NM_153021|PLB1|151056|phospholipase B1##BC153864|PLB1|151056|phospholipase B1##BC042674|PLB1|151056|phospholipase B1##AK303682|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK295957|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK316532|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_206876|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_002709|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647970|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK312329|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647295|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##X80910|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	0.971372	CTCF.p2:0:0.971
chr5	31809294	31809410	reg1000780.p1	17.522	+	NM_178140	-10322	+	TSC_hg19_v1_chr5_+_31639424 AB002298	-169882	+	NM_018356 TSC_hg19_v1_chr5_+_31532398 BC032845 AK299156 AK002055 BC021215 AB527598	-276917	+	TSC_hg19_v1_chr5_+_32173523 AK055939	364164	+	TSC_hg19_v1_chr5_-_32174291 AJ296152	364916	-	TSC_hg19_v1_chr5_-_32174327 BC063586	364988	-	NM_178140|PDZD2|23037|PDZ domain containing 2##AB002298|PDZD2|23037|PDZ domain containing 2##NM_018356|C5orf22|55322|chromosome 5 open reading frame 22##BC032845|C5orf22|55322|chromosome 5 open reading frame 22##AK299156|C5orf22|55322|chromosome 5 open reading frame 22##AK002055|C5orf22|55322|chromosome 5 open reading frame 22##BC021215|C5orf22|55322|chromosome 5 open reading frame 22##AK055939|LOC153546|153546|uncharacterized LOC153546##AJ296152|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##BC063586|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)	0.978917	CTCF.p2:8:0.979
chr12	16009421	16009543	reg1000824.p1	17.517	+	TSC_hg19_v1_chr12_-_15942350 AK304860 NM_004447	-67053	-	TSC_hg19_v1_chr12_-_15942323 U12535 BC005836 AK291777 BC030010	-67250	-	TSC_hg19_v1_chr12_-_15865848 AK292931	-143618	-	NM_007178 TSC_hg19_v1_chr12_+_16035321 AK074607 AK315891 AK297942 BC062306 AF161496 AB024327 AL136691 AK312295	25848	+	AJ010025 BC000162 TSC_hg19_v1_chr12_+_16035508 U56430 AY049776 DQ890951 DQ894113 AB385074 CU674068 BT020044 BT020045	26086	+	BC041328 NM_015954 TSC_hg19_v1_chr12_+_16064223	54684	+	AK304860|EPS8|2059|epidermal growth factor receptor pathway substrate 8##NM_004447|EPS8|2059|epidermal growth factor receptor pathway substrate 8##U12535|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC005836|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK291777|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC030010|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK292931|EPS8|2059|epidermal growth factor receptor pathway substrate 8##NM_007178|STRAP|11171|serine/threonine kinase receptor associated protein##AK315891|STRAP|11171|serine/threonine kinase receptor associated protein##AK297942|STRAP|11171|serine/threonine kinase receptor associated protein##BC062306|STRAP|11171|serine/threonine kinase receptor associated protein##AF161496|STRAP|11171|serine/threonine kinase receptor associated protein##AB024327|STRAP|11171|serine/threonine kinase receptor associated protein##AL136691|STRAP|11171|serine/threonine kinase receptor associated protein##AK312295|STRAP|11171|serine/threonine kinase receptor associated protein##AJ010025|STRAP|11171|serine/threonine kinase receptor associated protein##BC000162|STRAP|11171|serine/threonine kinase receptor associated protein##AY049776|STRAP|11171|serine/threonine kinase receptor associated protein##DQ890951|STRAP|11171|serine/threonine kinase receptor associated protein##DQ894113|STRAP|11171|serine/threonine kinase receptor associated protein##BT020044|STRAP|11171|serine/threonine kinase receptor associated protein##BT020045|STRAP|11171|serine/threonine kinase receptor associated protein##BC041328|DERA|51071|deoxyribose-phosphate aldolase (putative)##NM_015954|DERA|51071|deoxyribose-phosphate aldolase (putative)	0.997622	CTCF.p2:9:0.998
chr13	111471905	111472037	reg1000843.p1	17.514	+	AB024402 AF181849 NM_005537	-104628	+	AB024401 AF149721 TSC_hg19_v1_chr13_+_111366061	-105916	+	NM_198218 AF181850 NM_198219	-106355	+	CU674848 CU691752 TSC_hg19_v1_chr13_-_111567293	95316	-	TSC_hg19_v1_chr13_-_111567375 BC001727 AK096083 BC039715	95394	-	AK000100 NM_017664 TSC_hg19_v1_chr13_-_111567417	95445	-	AB024402|ING1|3621|inhibitor of growth family, member 1##AF181849|ING1|3621|inhibitor of growth family, member 1##NM_005537|ING1|3621|inhibitor of growth family, member 1##AB024401|ING1|3621|inhibitor of growth family, member 1##AF149721|ING1|3621|inhibitor of growth family, member 1##NM_198218|ING1|3621|inhibitor of growth family, member 1##AF181850|ING1|3621|inhibitor of growth family, member 1##NM_198219|ING1|3621|inhibitor of growth family, member 1##BC001727|ANKRD10|55608|ankyrin repeat domain 10##AK096083|ANKRD10|55608|ankyrin repeat domain 10##BC039715|ANKRD10|55608|ankyrin repeat domain 10##AK000100|ANKRD10|55608|ankyrin repeat domain 10##NM_017664|ANKRD10|55608|ankyrin repeat domain 10	0.99796	CTCF.p2:2:0.998
chr17	25708119	25708235	reg1000503.p1	17.510	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-86896	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-87055	+	NM_001190452	-3685741	+	BC035488 BC042106 NM_014238	90852	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	249991	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	250026	+	AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9	1.064756	CTCF.p2:37:0.983
chr18	32987979	32988125	reg1000684.p1	17.510	+	BC130288 BC136314 AF492004 AF533251 AK055775 NM_145756	-30759	-	TSC_hg19_v1_chr18_-_32924421 AK291246 NM_006965	-63631	-	TSC_hg19_v1_chr18_-_32924385 AF038964 BC003566 U68536 BC016801	-63654	-	AK095502 AK300660 BC039404 NM_001098817 NM_194281	89873	-	NM_020474 BC047746 U41514 AB529022 X85018	246527	+	NM_001201474 NM_001201475 NM_001201476 NM_031446 BC108730 TSC_hg19_v1_chr18_+_33552656 BC119765 BC119766 AK311536 AF277182 AF277189 BC025950	564615	+	BC130288|ZNF396|252884|zinc finger protein 396##BC136314|ZNF396|252884|zinc finger protein 396##AF492004|ZNF396|252884|zinc finger protein 396##AF533251|ZNF396|252884|zinc finger protein 396##AK055775|ZNF396|252884|zinc finger protein 396##NM_145756|ZNF396|252884|zinc finger protein 396##AK291246|ZNF24|7572|zinc finger protein 24##NM_006965|ZNF24|7572|zinc finger protein 24##AF038964|ZNF24|7572|zinc finger protein 24##BC003566|ZNF24|7572|zinc finger protein 24##U68536|ZNF24|7572|zinc finger protein 24##BC016801|ZNF24|7572|zinc finger protein 24##AK095502|INO80C|125476|INO80 complex subunit C##AK300660|INO80C|125476|INO80 complex subunit C##BC039404|INO80C|125476|INO80 complex subunit C##NM_001098817|INO80C|125476|INO80 complex subunit C##NM_194281|INO80C|125476|INO80 complex subunit C##NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21##NM_031446|C18orf21|83608|chromosome 18 open reading frame 21##BC108730|C18orf21|83608|chromosome 18 open reading frame 21##BC119765|C18orf21|83608|chromosome 18 open reading frame 21##BC119766|C18orf21|83608|chromosome 18 open reading frame 21##AF277182|C18orf21|83608|chromosome 18 open reading frame 21##AF277189|C18orf21|83608|chromosome 18 open reading frame 21##BC025950|C18orf21|83608|chromosome 18 open reading frame 21	0.995018	CTCF.p2:-23:0.995
chr10	3281952	3282078	reg1000743.p1	17.506	+	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-67010	-	CU678866 TSC_hg19_v1_chr10_-_3214975 AB384562 BC005025 AK225084 AK293788 AK315117 AK294865 AK299464 AK303406 BC095422 BX649017 AF061243	-67045	-	BC045577 TSC_hg19_v1_chr10_-_3214936	-67090	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	545296	-	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	545494	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1586403	+	BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC005025|PITRM1|10531|pitrilysin metallopeptidase 1##AK225084|PITRM1|10531|pitrilysin metallopeptidase 1##AK293788|PITRM1|10531|pitrilysin metallopeptidase 1##AK315117|PITRM1|10531|pitrilysin metallopeptidase 1##AK294865|PITRM1|10531|pitrilysin metallopeptidase 1##AK299464|PITRM1|10531|pitrilysin metallopeptidase 1##AK303406|PITRM1|10531|pitrilysin metallopeptidase 1##BC095422|PITRM1|10531|pitrilysin metallopeptidase 1##BX649017|PITRM1|10531|pitrilysin metallopeptidase 1##AF061243|PITRM1|10531|pitrilysin metallopeptidase 1##BC045577|PITRM1|10531|pitrilysin metallopeptidase 1##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2	0.684206	CTCF.p2:-21:0.684
chr12	97542858	97542973	reg1000740.p1	17.503	+	BC027605 NM_001135175	-241672	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-241884	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-748598	-	TSC_hg19_v1_chr12_-_98897622 AK126817	1354712	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	1366452	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	1366492	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.388645	CTCF.p2:-5:0.389
chr3	38008905	38009035	reg1000899.p1	17.499	+	TSC_hg19_v1_chr3_+_37903656 AJ575644 AJ575645 NM_001008392 NM_005808 AY279532 AY364238	-105304	+	TSC_hg19_v1_chr3_+_37493631 BC030198 D25303 NM_002207 L24158	-515216	+	NM_178339 NM_178342 AJ493604 AJ493603	-567956	+	TSC_hg19_v1_chr3_+_38032276 BC004300	23306	+	NM_015873	26107	+	TSC_hg19_v1_chr3_+_38035642 AK309304	26692	+	AJ575644|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AJ575645|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_001008392|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_005808|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY279532|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY364238|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##BC030198|ITGA9|3680|integrin, alpha 9##D25303|ITGA9|3680|integrin, alpha 9##NM_002207|ITGA9|3680|integrin, alpha 9##L24158|ITGA9|3680|integrin, alpha 9##NM_178339|C3orf35|339883|chromosome 3 open reading frame 35##NM_178342|C3orf35|339883|chromosome 3 open reading frame 35##AJ493604|C3orf35|339883|chromosome 3 open reading frame 35##AJ493603|C3orf35|339883|chromosome 3 open reading frame 35##BC004300|VILL|50853|villin-like##NM_015873|VILL|50853|villin-like##AK309304|VILL|50853|villin-like	0.984351	CTCF.p2:2:0.984
chr22	28405428	28405544	reg1000569.p2	17.498	+	TSC_hg19_v1_chr22_-_28315245 BC018704 D30037 AK313064 CR456541 NM_012399	-90222	-	TSC_hg19_v1_chr22_-_28315203 BC031427	-90279	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	-90312	-	TSC_hg19_v1_chr22_-_29075801 NM_001145418	670307	-	BC004207 AK289360 CR456418 NM_001005735 NM_007194 NM_145862 AK290754 AB164374	732331	-	BC000004 TSC_hg19_v1_chr22_+_29138056 NM_172002 BC065569 CR456462 AY191719 AB528150 CU013013 CU013301	732575	+	BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta##D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta##CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_001145418|TTC28|23331|tetratricopeptide repeat domain 28##BC004207|CHEK2|11200|checkpoint kinase 2##AK289360|CHEK2|11200|checkpoint kinase 2##CR456418|CHEK2|11200|checkpoint kinase 2##NM_001005735|CHEK2|11200|checkpoint kinase 2##NM_007194|CHEK2|11200|checkpoint kinase 2##NM_145862|CHEK2|11200|checkpoint kinase 2##AK290754|CHEK2|11200|checkpoint kinase 2##NM_172002|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##BC065569|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##CR456462|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##AY191719|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)	0.993244	CTCF.p2:12:0.993
chr6	35310119	35310228	reg1000475.p2	17.493	+	TSC_hg19_v1_chr6_+_35265672 BC007702	-44506	+	AK093613 AY241694 NM_022047 TSC_hg19_v1_chr6_+_35265594 AK314756 BC017504 AB527549 AJ276095	-44559	+	TSC_hg19_v1_chr6_+_35227490 AK294605 BC002549 NM_003427 BC000133 M91592	-82646	+	TSC_hg19_v1_chr6_+_35310334 NM_001171818 NM_001171819 NM_001171820 NM_006238 NM_177435	153	+	TSC_hg19_v1_chr6_+_35310339 AK122614	166	+	TSC_hg19_v1_chr6_+_35310375 AK304878 AB099507 AK296425 AK291661 BC002715 BC007578	203	+	BC007702|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AK093613|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AY241694|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##NM_022047|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AK314756|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##BC017504|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AJ276095|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AK294605|ZNF76|7629|zinc finger protein 76##BC002549|ZNF76|7629|zinc finger protein 76##NM_003427|ZNF76|7629|zinc finger protein 76##BC000133|ZNF76|7629|zinc finger protein 76##M91592|ZNF76|7629|zinc finger protein 76##NM_001171818|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_001171819|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_001171820|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_006238|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_177435|PPARD|5467|peroxisome proliferator-activated receptor delta##AK122614|PPARD|5467|peroxisome proliferator-activated receptor delta##AK304878|PPARD|5467|peroxisome proliferator-activated receptor delta##AB099507|PPARD|5467|peroxisome proliferator-activated receptor delta##AK296425|PPARD|5467|peroxisome proliferator-activated receptor delta##AK291661|PPARD|5467|peroxisome proliferator-activated receptor delta##BC002715|PPARD|5467|peroxisome proliferator-activated receptor delta##BC007578|PPARD|5467|peroxisome proliferator-activated receptor delta	0.785988	CTCF.p2:-4:0.786
chr19	47165368	47165495	reg1000719.p2	17.492	+	TSC_hg19_v1_chr19_-_47164311 BC034052 NM_145056	-1061	-	AF493875 NM_033258 BC095514	-27492	-	BC017857 L29016 D29634 BC110342 BC075814 D25418 TSC_hg19_v1_chr19_-_47128333 AK315278 NM_000960	-37108	-	BC015472 TSC_hg19_v1_chr19_-_47197232	31768	-	NM_001079882	52145	-	TSC_hg19_v1_chr19_-_47220370 AK300339 AK095884 NM_001079880 NM_001079881 NM_016457	54951	-	BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)##NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)##AF493875|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##NM_033258|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##BC095514|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##L29016|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##D29634|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC110342|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC075814|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##D25418|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##AK315278|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##NM_000960|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC015472|PRKD2|25865|protein kinase D2##NM_001079882|PRKD2|25865|protein kinase D2##AK300339|PRKD2|25865|protein kinase D2##AK095884|PRKD2|25865|protein kinase D2##NM_001079880|PRKD2|25865|protein kinase D2##NM_001079881|PRKD2|25865|protein kinase D2##NM_016457|PRKD2|25865|protein kinase D2	0.555245	CTCF.p2:21:0.555
chr5	153451990	153452113	reg1000821.p1	17.490	+	TSC_hg19_v1_chr5_+_153418558 AK315573 BC026244	-33491	+	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	-33527	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	-33594	-	TSC_hg19_v1_chr5_+_153570292 BC050333 NM_198321 AK127135 AB078145 AB527381 AJ505950 AK074132	118307	+	TSC_hg19_v1_chr5_-_153825380 BC042059 AK095428	373316	-	TSC_hg19_v1_chr5_+_153825535 AK021588 NM_001131062 NM_001131063 NM_024632	373468	+	AK315573|MFAP3|4238|microfibrillar-associated protein 3##BC026244|MFAP3|4238|microfibrillar-associated protein 3##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2##BC050333|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##NM_198321|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK127135|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AB078145|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AJ505950|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK074132|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##BC042059|FLJ38109|386627|uncharacterized LOC386627##AK095428|FLJ38109|386627|uncharacterized LOC386627##AK021588|SAP30L|79685|SAP30-like##NM_001131062|SAP30L|79685|SAP30-like##NM_001131063|SAP30L|79685|SAP30-like##NM_024632|SAP30L|79685|SAP30-like	0.946884	CTCF.p2:-4:0.947
chr10	35924569	35924693	reg1000972.p1	17.483	+	AK074504 NM_153368	-30294	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	-298837	+	TSC_hg19_v1_chr10_+_35625400 AK314666	-299175	+	AB587328 AB043703 NM_031866	5728	-	AF269087 NM_052997	1490153	+	NM_001190489	1967227	-	AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AK314666|CCNY|219771|cyclin Y##AB043703|FZD8|8325|frizzled family receptor 8##NM_031866|FZD8|8325|frizzled family receptor 8##AF269087|ANKRD30A|91074|ankyrin repeat domain 30A##NM_052997|ANKRD30A|91074|ankyrin repeat domain 30A##NM_001190489|MTRNR2L7|100288485|MT-RNR2-like 7	0.99978	CTCF.p2:-11:1.000
chr17	36580049	36580145	reg1000454.p1	17.482	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	-72234	+	AY584611 NM_001004334	-80405	-	TSC_hg19_v1_chr17_+_36453138 AK172741 AK225031 HQ258365 BC006235	-126960	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	4608	+	TSC_hg19_v1_chr17_-_36729122 AK295027	149025	-	BC029278 TSC_hg19_v1_chr17_-_36760969	180841	-	BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##AK172741|MRPL45|84311|mitochondrial ribosomal protein L45##AK225031|MRPL45|84311|mitochondrial ribosomal protein L45##HQ258365|MRPL45|84311|mitochondrial ribosomal protein L45##BC006235|MRPL45|84311|mitochondrial ribosomal protein L45##NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1	0.241772	CTCF.p2:-9:0.242
chr1	20427552	20427695	reg1000916.p1	17.474	+	TSC_hg19_v1_chr1_+_20396654 NM_000929 BC036792 U03090	-30879	+	BC005919 NM_000300 NM_001161727 NM_001161728	-120704	-	M22430 AK291302 NM_001161729	-121501	-	AB590095 AM392918 AM392954 AM392977 AM393597 AM393824 BC025706 NM_012400 AF112982 AY358606 AK290406 AF188625 AK310156 AK311903 AK301396	18401	-	AK093645 AX748240 BX647458 NM_022819 AB528809	38245	+	TSC_hg19_v1_chr1_+_20480706 BC041651	53140	+	NM_000929|PLA2G5|5322|phospholipase A2, group V##BC036792|PLA2G5|5322|phospholipase A2, group V##U03090|PLA2G5|5322|phospholipase A2, group V##BC005919|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_000300|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161727|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161728|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##M22430|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##AK291302|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161729|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##AM392918|PLA2G2D|26279|phospholipase A2, group IID##AM392954|PLA2G2D|26279|phospholipase A2, group IID##AM392977|PLA2G2D|26279|phospholipase A2, group IID##AM393597|PLA2G2D|26279|phospholipase A2, group IID##AM393824|PLA2G2D|26279|phospholipase A2, group IID##BC025706|PLA2G2D|26279|phospholipase A2, group IID##NM_012400|PLA2G2D|26279|phospholipase A2, group IID##AF112982|PLA2G2D|26279|phospholipase A2, group IID##AY358606|PLA2G2D|26279|phospholipase A2, group IID##AK290406|PLA2G2D|26279|phospholipase A2, group IID##AF188625|PLA2G2D|26279|phospholipase A2, group IID##AK310156|PLA2G2D|26279|phospholipase A2, group IID##AK311903|PLA2G2D|26279|phospholipase A2, group IID##AK301396|PLA2G2D|26279|phospholipase A2, group IID##AK093645|PLA2G2F|64600|phospholipase A2, group IIF##BX647458|PLA2G2F|64600|phospholipase A2, group IIF##NM_022819|PLA2G2F|64600|phospholipase A2, group IIF	0.0	
chr7	64676929	64677056	reg1000547.p2	17.473	+	TSC_hg19_v1_chr7_+_64601445 AK057766	-75472	+	TSC_hg19_v1_chr7_+_64498727 BX649060 BC071617	-178286	+	TSC_hg19_v1_chr7_-_64467066 AK295189 AK097499 NM_001007253	-209928	-	TSC_hg19_v1_chr7_+_64838761 BX647875 NM_007139 NM_152626 BC040594	161758	+	TSC_hg19_v1_chr7_+_64838793 AK091618 AX747097 BC036439 M61872	161815	+	TSC_hg19_v1_chr7_-_65215912 BX647963	538926	-	AK057766|INTS4L1|285905|integrator complex subunit 4-like 1##BX649060|CCT6P3|643180|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 3##BC071617|CCT6P3|643180|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 3##AK295189|ERV3-1|2086|endogenous retrovirus group 3, member 1##NM_001007253|ERV3-1|2086|endogenous retrovirus group 3, member 1##BX647875|ZNF92|168374|zinc finger protein 92##NM_007139|ZNF92|168374|zinc finger protein 92##NM_152626|ZNF92|168374|zinc finger protein 92##BC040594|ZNF92|168374|zinc finger protein 92##AK091618|ZNF92|168374|zinc finger protein 92##BC036439|ZNF92|168374|zinc finger protein 92##M61872|ZNF92|168374|zinc finger protein 92	0.995607	CTCF.p2:-17:0.996
chr17	40115127	40115260	reg1000587.p1	17.470	+	BC025390 TSC_hg19_v1_chr17_+_40086881 NM_031421 AL136760 BC067297 AK055498 AM393695 AB463310 CU688280 CU692988	-28268	+	TSC_hg19_v1_chr17_-_40075239 BC006195 NM_001096 NM_198830 AK295675 AK312315	-39928	-	TSC_hg19_v1_chr17_-_40075237 AK304802	-39960	-	TSC_hg19_v1_chr17_+_40118778 NM_033133	3546	+	TSC_hg19_v1_chr17_+_40118815 BC028040 BC006392 AK295351 AK026876 AK097833 AK098384 AK294179 BC001362 BC011046	3643	+	TSC_hg19_v1_chr17_+_40119669 AK308696	4533	+	BC025390|TTC25|83538|tetratricopeptide repeat domain 25##NM_031421|TTC25|83538|tetratricopeptide repeat domain 25##AL136760|TTC25|83538|tetratricopeptide repeat domain 25##BC067297|TTC25|83538|tetratricopeptide repeat domain 25##AK055498|TTC25|83538|tetratricopeptide repeat domain 25##AM393695|TTC25|83538|tetratricopeptide repeat domain 25##BC006195|ACLY|47|ATP citrate lyase##NM_001096|ACLY|47|ATP citrate lyase##NM_198830|ACLY|47|ATP citrate lyase##AK295675|ACLY|47|ATP citrate lyase##AK312315|ACLY|47|ATP citrate lyase##AK304802|ACLY|47|ATP citrate lyase##NM_033133|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##BC028040|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##BC006392|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK295351|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK026876|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK097833|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK098384|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK294179|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##BC001362|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##BC011046|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase	1.058732	CTCF.p2:-21:0.984
chr4	7805874	7805994	reg1000517.p2	17.470	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	-369278	-	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-611539	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-736133	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	135454	-	TSC_hg19_v1_chr4_-_8073714 AK094798	267782	-	TSC_hg19_v1_chr4_-_8129388 AK301060	323451	-	BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2	0.995678	CTCF.p2:-6:0.996
chr7	137588499	137588646	reg1000996.p1	17.465	+	TSC_hg19_v1_chr7_+_137531690 BC047556	-56840	+	TSC_hg19_v1_chr7_-_137531587 NM_004717	-56976	-	BC005916 TSC_hg19_v1_chr7_-_137028543 NM_002825 M57399	-560017	-	TSC_hg19_v1_chr7_-_137620668 BC015585	32090	-	NM_001243523	49521	+	AK293048 BC110813 TSC_hg19_v1_chr7_-_137686800 BC063666 AJ549092 AJ549387	98222	-	NM_004717|DGKI|9162|diacylglycerol kinase, iota##BC005916|PTN|5764|pleiotrophin##NM_002825|PTN|5764|pleiotrophin##M57399|PTN|5764|pleiotrophin##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_001243523|LOC100130880|100130880|uncharacterized LOC100130880##AK293048|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC110813|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC063666|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549092|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549387|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.994582	CTCF.p2:-14:0.995
chr7	45194337	45194472	reg1000986.p1	17.457	+	TSC_hg19_v1_chr7_-_45151297 AK300489 AL833840 AK001281 AB023165 NM_004749 NM_030900 NM_199122	-43092	-	BC017235 BC014918 AK022575 AK222943 TSC_hg19_v1_chr7_-_45151294	-43121	-	NM_001146334 TSC_hg19_v1_chr7_-_45128497	-65905	-	NM_005856 TSC_hg19_v1_chr7_+_45197392 AJ001016 BC022304 BC053852 AK222469 DQ891371 CU691036 AK311871 AY265459	2992	+	TSC_hg19_v1_chr7_+_45614105 AF497515 NM_021116	419698	+	AB209496 TSC_hg19_v1_chr7_+_45614187	419795	+	AK300489|TBRG4|9238|transforming growth factor beta regulator 4##AL833840|TBRG4|9238|transforming growth factor beta regulator 4##AK001281|TBRG4|9238|transforming growth factor beta regulator 4##AB023165|TBRG4|9238|transforming growth factor beta regulator 4##NM_004749|TBRG4|9238|transforming growth factor beta regulator 4##NM_030900|TBRG4|9238|transforming growth factor beta regulator 4##NM_199122|TBRG4|9238|transforming growth factor beta regulator 4##BC017235|TBRG4|9238|transforming growth factor beta regulator 4##BC014918|TBRG4|9238|transforming growth factor beta regulator 4##AK022575|TBRG4|9238|transforming growth factor beta regulator 4##AK222943|TBRG4|9238|transforming growth factor beta regulator 4##NM_001146334|NACAD|23148|NAC alpha domain containing##NM_005856|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AJ001016|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC022304|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC053852|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK222469|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##DQ891371|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK311871|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AY265459|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AF497515|ADCY1|107|adenylate cyclase 1 (brain)##NM_021116|ADCY1|107|adenylate cyclase 1 (brain)##AB209496|ADCY1|107|adenylate cyclase 1 (brain)	0.996209	CTCF.p2:-18:0.996
chr19	49087635	49087763	reg1000949.p1	17.453	+	NM_004605	-8707	+	TSC_hg19_v1_chr19_+_49055432 NM_177973 U92315 BC034694 CU689942	-32235	+	AB067470 NM_001080434	-71268	-	AF353721 NM_133498 AY358387 BC047334	22310	+	BC111970 BC111972 NM_017708 AK000207	29056	-	TSC_hg19_v1_chr19_-_49122434 L11566 BC009708 BC051837 AK091257 AX746879 AK026558 AK293386 BC021743 D28461 NM_000979	34734	-	NM_004605|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##NM_177973|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##U92315|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##BC034694|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##AB067470|LMTK3|114783|lemur tyrosine kinase 3##NM_001080434|LMTK3|114783|lemur tyrosine kinase 3##AF353721|SPACA4|171169|sperm acrosome associated 4##NM_133498|SPACA4|171169|sperm acrosome associated 4##AY358387|SPACA4|171169|sperm acrosome associated 4##BC047334|SPACA4|171169|sperm acrosome associated 4##BC111970|FAM83E|54854|family with sequence similarity 83, member E##BC111972|FAM83E|54854|family with sequence similarity 83, member E##NM_017708|FAM83E|54854|family with sequence similarity 83, member E##AK000207|FAM83E|54854|family with sequence similarity 83, member E##L11566|RPL18|6141|ribosomal protein L18##BC009708|RPL18|6141|ribosomal protein L18##AK026558|RPL18|6141|ribosomal protein L18##AK293386|RPL18|6141|ribosomal protein L18##BC021743|RPL18|6141|ribosomal protein L18##D28461|RPL18|6141|ribosomal protein L18##NM_000979|RPL18|6141|ribosomal protein L18	0.993316	CTCF.p2:20:0.993
chr22	42353750	42353866	reg1000608.p1	17.451	+	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	-10685	-	EU035297 NM_001110215	-17586	-	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	-31009	-	TSC_hg19_v1_chr22_+_42372810 NM_019106 NM_145733 AK290037 AK299919 AL833942 BC111779 CR456572 AF285107 AF285108 AF285109	19100	+	AK128138 NM_152613 TSC_hg19_v1_chr22_+_42394808 AK129656 AK296138 BC022546 BC022549 BC038789 AK310980 CR456400 AB463345 CU012958 CU013246	40967	+	AB528190 CU013127 CU013415 DQ891874 DQ895062 CR456527 M38083 BC000095 TSC_hg19_v1_chr22_-_42466570	112627	-	CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_019106|SEPT3|55964|septin 3##NM_145733|SEPT3|55964|septin 3##AK290037|SEPT3|55964|septin 3##AK299919|SEPT3|55964|septin 3##AL833942|SEPT3|55964|septin 3##BC111779|SEPT3|55964|septin 3##CR456572|SEPT3|55964|septin 3##AF285107|SEPT3|55964|septin 3##AF285108|SEPT3|55964|septin 3##AF285109|SEPT3|55964|septin 3##AK128138|WBP2NL|164684|WBP2 N-terminal like##NM_152613|WBP2NL|164684|WBP2 N-terminal like##AK129656|WBP2NL|164684|WBP2 N-terminal like##AK296138|WBP2NL|164684|WBP2 N-terminal like##BC022546|WBP2NL|164684|WBP2 N-terminal like##BC022549|WBP2NL|164684|WBP2 N-terminal like##CR456400|WBP2NL|164684|WBP2 N-terminal like##CU013127|NAGA|4668|N-acetylgalactosaminidase, alpha-##CU013415|NAGA|4668|N-acetylgalactosaminidase, alpha-##DQ891874|NAGA|4668|N-acetylgalactosaminidase, alpha-##DQ895062|NAGA|4668|N-acetylgalactosaminidase, alpha-##CR456527|NAGA|4668|N-acetylgalactosaminidase, alpha-##M38083|NAGA|4668|N-acetylgalactosaminidase, alpha-##BC000095|NAGA|4668|N-acetylgalactosaminidase, alpha-	1.268816	CTCF.p2:-14:0.270	CTCF.p2:17:0.999
chr3	52373665	52373801	reg1000978.p1	17.450	+	AB037831 AB290163 NM_015512	-23399	+	TSC_hg19_v1_chr3_+_52321862 BC042151 BC021896	-51859	+	AF448855 AY172690 BC036862 NM_001144951 NM_145262 TSC_hg19_v1_chr3_+_52321852 AK074215	-51890	+	CU674778 D88812 DQ892545 DQ895756 AF045581 TSC_hg19_v1_chr3_-_52443999 BC001596 NM_004656	70221	-	TSC_hg19_v1_chr3_-_52444016 D87462	70283	-	TSC_hg19_v1_chr3_-_52444050 AK292608	70315	-	AB037831|DNAH1|25981|dynein, axonemal, heavy chain 1##AB290163|DNAH1|25981|dynein, axonemal, heavy chain 1##NM_015512|DNAH1|25981|dynein, axonemal, heavy chain 1##BC042151|GLYCTK|132158|glycerate kinase##BC021896|GLYCTK|132158|glycerate kinase##AF448855|GLYCTK|132158|glycerate kinase##AY172690|GLYCTK|132158|glycerate kinase##BC036862|GLYCTK|132158|glycerate kinase##NM_001144951|GLYCTK|132158|glycerate kinase##NM_145262|GLYCTK|132158|glycerate kinase##AK074215|GLYCTK|132158|glycerate kinase##D88812|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##DQ892545|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##DQ895756|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##AF045581|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##BC001596|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##NM_004656|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##D87462|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##AK292608|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)	0.961765	CTCF.p2:21:0.962
chr10	72518926	72519050	reg1000860.p1	17.447	+	AB462932 AF358666 AJ345098 NM_080722 NM_139155	-86431	+	BC063043 TSC_hg19_v1_chr10_-_72362518 FJ555237 NM_001083116 NM_005041	-156462	-	BC047695 TSC_hg19_v1_chr10_-_72362497 AK312754	-156519	-	BC060774 BC139728 BC137543 BC137544 BC144692 BC144694 BC144695 AK057382 NM_152710	26145	-	TSC_hg19_v1_chr10_+_72575685 NM_003901 BC052991 BC051238 BC068061	56681	+	TSC_hg19_v1_chr10_+_72575751 AB033078 AJ011304	56767	+	AF358666|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##AJ345098|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_080722|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_139155|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##BC063043|PRF1|5551|perforin 1 (pore forming protein)##FJ555237|PRF1|5551|perforin 1 (pore forming protein)##NM_001083116|PRF1|5551|perforin 1 (pore forming protein)##NM_005041|PRF1|5551|perforin 1 (pore forming protein)##BC047695|PRF1|5551|perforin 1 (pore forming protein)##AK312754|PRF1|5551|perforin 1 (pore forming protein)##BC060774|C10orf27|219793|chromosome 10 open reading frame 27##BC139728|C10orf27|219793|chromosome 10 open reading frame 27##BC137543|C10orf27|219793|chromosome 10 open reading frame 27##BC137544|C10orf27|219793|chromosome 10 open reading frame 27##BC144692|C10orf27|219793|chromosome 10 open reading frame 27##BC144694|C10orf27|219793|chromosome 10 open reading frame 27##BC144695|C10orf27|219793|chromosome 10 open reading frame 27##AK057382|C10orf27|219793|chromosome 10 open reading frame 27##NM_152710|C10orf27|219793|chromosome 10 open reading frame 27##NM_003901|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC052991|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC051238|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC068061|SGPL1|8879|sphingosine-1-phosphate lyase 1##AB033078|SGPL1|8879|sphingosine-1-phosphate lyase 1##AJ011304|SGPL1|8879|sphingosine-1-phosphate lyase 1	0.998848	CTCF.p2:11:0.999
chr11	64845754	64845886	reg1001111.p1	17.443	+	AB527189 TSC_hg19_v1_chr11_-_64826007 AJ012371 NM_005468 BC143643 BC143644	-19818	-	TSC_hg19_v1_chr11_+_64808404 BC007448 U79266	-37402	+	NM_013299 TSC_hg19_v1_chr11_+_64808377	-37439	+	DQ893251 DQ896580 TSC_hg19_v1_chr11_-_64851515 BC011000 AK291490	5680	-	TSC_hg19_v1_chr11_-_64851564 NM_080668	5765	-	TSC_hg19_v1_chr11_+_64851693 NM_006782 AF030291 AF001891 AK295279 AK316044 AK291964 AK308740	5886	+	AJ012371|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##NM_005468|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC143643|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC143644|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC007448|SAC3D1|29901|SAC3 domain containing 1##U79266|SAC3D1|29901|SAC3 domain containing 1##NM_013299|SAC3D1|29901|SAC3 domain containing 1##DQ893251|CDCA5|113130|cell division cycle associated 5##DQ896580|CDCA5|113130|cell division cycle associated 5##BC011000|CDCA5|113130|cell division cycle associated 5##AK291490|CDCA5|113130|cell division cycle associated 5##NM_080668|CDCA5|113130|cell division cycle associated 5##NM_006782|ZFPL1|7542|zinc finger protein-like 1##AF030291|ZFPL1|7542|zinc finger protein-like 1##AF001891|ZFPL1|7542|zinc finger protein-like 1##AK295279|ZFPL1|7542|zinc finger protein-like 1##AK316044|ZFPL1|7542|zinc finger protein-like 1##AK291964|ZFPL1|7542|zinc finger protein-like 1##AK308740|ZFPL1|7542|zinc finger protein-like 1	0.073168	
chr9	41936615	41936757	reg1000858.p1	17.443	+	BC040528 NM_001113541 NM_015667	-436008	+	BC040528 NM_001113541 NM_015667 NM_001242613	-609307	-	AK057375 AK292150 NM_033160	-1144600	-	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	18228	-	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	431672	+	NM_001099279 NM_199244	780547	+	BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##AK057375|ZNF658|26149|zinc finger protein 658##AK292150|ZNF658|26149|zinc finger protein 658##NM_033160|ZNF658|26149|zinc finger protein 658##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.964718	CTCF.p2:11:0.965
chr22	50587696	50587814	reg1000741.p1	17.442	+	NM_001164106 AK000033	-2259	+	AK302401 NM_001164105	-59071	+	BC140944 NM_001164104 NM_018995 TSC_hg19_v1_chr22_+_50528444 BC063837 BC029552 BC042828 AF285604 BC150137 BC152539 CR456466 AB463128 BC139927 CU013016 CU013304	-59344	+	AK299910 NM_001160300 NM_052839 AK096019 TSC_hg19_v1_chr22_+_50609175 AF398510 AF398511 BC101023	21419	+	TSC_hg19_v1_chr22_+_50624346 BC093029	36553	+	TSC_hg19_v1_chr22_+_50624353 BC012445 AL449244 NM_025204 AK292050 AY203945	36626	+	NM_001164106|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##AK000033|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##AK302401|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##NM_001164105|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##BC140944|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##NM_001164104|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##NM_018995|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##BC063837|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##BC029552|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##BC042828|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##AF285604|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##BC150137|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##BC152539|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##CR456466|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##BC139927|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##CU013016|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##CU013304|MOV10L1|54456|Mov10l1, Moloney leukemia virus 10-like 1, homolog (mouse)##AK299910|PANX2|56666|pannexin 2##NM_001160300|PANX2|56666|pannexin 2##NM_052839|PANX2|56666|pannexin 2##AK096019|PANX2|56666|pannexin 2##AF398510|PANX2|56666|pannexin 2##AF398511|PANX2|56666|pannexin 2##BC101023|PANX2|56666|pannexin 2##BC093029|TRABD|80305|TraB domain containing##BC012445|TRABD|80305|TraB domain containing##AL449244|TRABD|80305|TraB domain containing##NM_025204|TRABD|80305|TraB domain containing##AK292050|TRABD|80305|TraB domain containing##AY203945|TRABD|80305|TraB domain containing	0.29088	
chr7	150145901	150146037	reg1000722.p1	17.439	+	BC052099 TSC_hg19_v1_chr7_+_150130817 AK097158 BC109387	-15151	+	BC143767 TSC_hg19_v1_chr7_+_150102384	-43574	+	NM_173680 BC038111	-69542	+	TSC_hg19_v1_chr7_+_150147882 AK314426	1915	+	TSC_hg19_v1_chr7_+_150147936 NM_175571	1979	+	TSC_hg19_v1_chr7_+_150148080 AL834361 BC107037	2137	+	BC052099|LOC285972|285972|uncharacterized LOC285972##AK097158|LOC285972|285972|uncharacterized LOC285972##BC109387|LOC285972|285972|uncharacterized LOC285972##NM_173680|ZNF775|285971|zinc finger protein 775##BC038111|ZNF775|285971|zinc finger protein 775##AK314426|GIMAP8|155038|GTPase, IMAP family member 8##NM_175571|GIMAP8|155038|GTPase, IMAP family member 8##AL834361|GIMAP8|155038|GTPase, IMAP family member 8##BC107037|GIMAP8|155038|GTPase, IMAP family member 8	0.989164	CTCF.p2:-12:0.989
chr3	170028065	170028188	reg1000591.p1	17.438	+	TSC_hg19_v1_chr3_+_169940250 L33881 AK315342 AB590674 AB451443	-87761	+	TSC_hg19_v1_chr3_+_169940223 BC022016	-87897	+	TSC_hg19_v1_chr3_+_169940214 NM_002740 L18964	-87909	+	TSC_hg19_v1_chr3_+_170075455 NM_001145098 NM_005414	47343	+	TSC_hg19_v1_chr3_+_170075508 BC059386	47380	+	AK300053 TSC_hg19_v1_chr3_+_170075522 BC053554	47430	+	L33881|PRKCI|5584|protein kinase C, iota##AK315342|PRKCI|5584|protein kinase C, iota##AB451443|PRKCI|5584|protein kinase C, iota##BC022016|PRKCI|5584|protein kinase C, iota##NM_002740|PRKCI|5584|protein kinase C, iota##L18964|PRKCI|5584|protein kinase C, iota##NM_001145098|SKIL|6498|SKI-like oncogene##NM_005414|SKIL|6498|SKI-like oncogene##BC059386|SKIL|6498|SKI-like oncogene##AK300053|SKIL|6498|SKI-like oncogene	1.016556	CTCF.p2:-15:0.924
chr15	79476845	79476963	reg1000776.p1	17.436	+	AK290135 TSC_hg19_v1_chr15_-_79383114 BC040275 NM_001145648 NM_002891	-93756	-	L26584 CU691844 AB385192 TSC_hg19_v1_chr15_-_79382954	-94005	-	NM_153815 S62035	-178903	-	AK127037 NM_001146341	98241	+	TSC_hg19_v1_chr15_+_79603465 BC111547 BC010853 AK222516 BC022232 AK289434 AK297710 NM_007364 BC017495 AL109672 AY358974 BC000027	126557	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	126599	+	AK290135|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##BC040275|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_001145648|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_002891|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##L26584|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_153815|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##S62035|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK127037|ANKRD34C|390616|ankyrin repeat domain 34C##NM_001146341|ANKRD34C|390616|ankyrin repeat domain 34C##BC111547|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC010853|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK222516|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC022232|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK289434|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK297710|TMED3|23423|transmembrane emp24 protein transport domain containing 3##NM_007364|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC017495|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AL109672|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AY358974|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC000027|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3	0.994249	CTCF.p2:5:0.994
chr10	76859802	76859930	reg1000805.p1	17.430	+	AB027004 AB103375 NM_016364	-619	-	AY686755 NM_001003892 BC137321 BC137322	-41561	-	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-273512	+	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	9048	-	TSC_hg19_v1_chr10_+_76871413 BC080593 NM_001174156 NM_144660 AK057811	11551	+	NM_001184823	110045	+	AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13##BC080593|SAMD8|142891|sterile alpha motif domain containing 8##NM_001174156|SAMD8|142891|sterile alpha motif domain containing 8##NM_144660|SAMD8|142891|sterile alpha motif domain containing 8##AK057811|SAMD8|142891|sterile alpha motif domain containing 8##NM_001184823|VDAC2|7417|voltage-dependent anion channel 2	1.134895	CTCF.p2:14:1.000
chr6	134245203	134245333	reg1001004.p1	17.430	+	TSC_hg19_v1_chr6_+_134210277 AF035718 AF047419 BC025697	-34998	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	-35014	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	-682736	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	28096	+	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	29077	+	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	128435	-	AF035718|TCF21|6943|transcription factor 21##AF047419|TCF21|6943|transcription factor 21##BC025697|TCF21|6943|transcription factor 21##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21##BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1##NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	0.646092	CTCF.p2:-3:0.646
chr17	26867844	26867963	reg1000995.p1	17.426	+	NM_003593 Y11739	-16945	+	TSC_hg19_v1_chr17_+_26800661 AK314684 NM_001145975 NM_001145976 NM_003984 U26209 BC096276 BC096277 BC096278 BC096279 AK091926 AK298388 AK303909 AK303936	-67197	+	CU678258 TSC_hg19_v1_chr17_+_26794963	-73000	+	AF028788 AF028789 TSC_hg19_v1_chr17_-_26879616 AK292329 BC027176 U40998	11707	-	NM_005148 NM_054035 TSC_hg19_v1_chr17_-_26879647 AB593014	11749	-	AY359112 AB057723 AB527641 CU686718 TSC_hg19_v1_chr17_-_26898525 AK055512 BC069228 AK075428 AK297046 AK314583	30626	-	NM_003593|FOXN1|8456|forkhead box N1##Y11739|FOXN1|8456|forkhead box N1##AK314684|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145975|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145976|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_003984|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##U26209|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096276|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096277|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096278|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096279|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK091926|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK298388|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303909|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303936|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AF028788|UNC119|9094|unc-119 homolog (C. elegans)##AF028789|UNC119|9094|unc-119 homolog (C. elegans)##AK292329|UNC119|9094|unc-119 homolog (C. elegans)##BC027176|UNC119|9094|unc-119 homolog (C. elegans)##U40998|UNC119|9094|unc-119 homolog (C. elegans)##NM_005148|UNC119|9094|unc-119 homolog (C. elegans)##NM_054035|UNC119|9094|unc-119 homolog (C. elegans)##AB593014|UNC119|9094|unc-119 homolog (C. elegans)##AY359112|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AB057723|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK055512|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##BC069228|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK075428|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK297046|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK314583|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S	0.999956	CTCF.p2:11:1.000
chr19	6125649	6125776	reg1000882.p1	17.421	+	TSC_hg19_v1_chr19_-_6110613 BC028579 AK303321 NM_000635 NM_134433	-15100	-	TSC_hg19_v1_chr19_-_6110512 AK291196 BC071571 X76091	-15189	-	AK299856 TSC_hg19_v1_chr19_-_5978306 NM_003624 NM_007320 NM_007322	-147428	-	AY009107 BC022027 AK093433 AX748123 AK302604 AJ577571 NM_030924 BC090046 AL136854	10041	+	TSC_hg19_v1_chr19_-_6199558 AK056073	73835	-	AB463904 TSC_hg19_v1_chr19_-_6279803	154091	-	BC028579|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK303321|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_000635|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_134433|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK291196|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC071571|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##X76091|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK299856|RANBP3|8498|RAN binding protein 3##NM_003624|RANBP3|8498|RAN binding protein 3##NM_007320|RANBP3|8498|RAN binding protein 3##NM_007322|RANBP3|8498|RAN binding protein 3##AY009107|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC022027|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK093433|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK302604|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AJ577571|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##NM_030924|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC090046|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AL136854|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2	0.245121	CTCF.p2:7:0.245
chr4	146531088	146531218	reg1000830.p1	17.421	+	U59912 NM_001003688 U54826 AK293055	-127195	+	TSC_hg19_v1_chr4_+_146403004 U59423 NM_005900 BC001878	-128271	+	AK302581 NM_001102653	-430341	-	TSC_hg19_v1_chr4_+_146540536 AK126662 NM_172250	9393	+	NM_001080531	70202	+	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	328524	-	U59912|SMAD1|4086|SMAD family member 1##NM_001003688|SMAD1|4086|SMAD family member 1##U54826|SMAD1|4086|SMAD family member 1##AK293055|SMAD1|4086|SMAD family member 1##U59423|SMAD1|4086|SMAD family member 1##NM_005900|SMAD1|4086|SMAD family member 1##BC001878|SMAD1|4086|SMAD family member 1##AK302581|OTUD4|54726|OTU domain containing 4##NM_001102653|OTUD4|54726|OTU domain containing 4##AK126662|MMAA|166785|methylmalonic aciduria (cobalamin deficiency) cblA type##NM_172250|MMAA|166785|methylmalonic aciduria (cobalamin deficiency) cblA type##NM_001080531|C4orf51|646603|chromosome 4 open reading frame 51##AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827	0.573789	CTCF.p2:0:0.574
chr12	9950732	9950865	reg1000807.p1	17.419	+	AY238518 CU675505 DQ893175 DQ896474 L07555 AK291869 AK303174 AK303383 BC007037 NM_001781 Z22576	-37343	-	AF518873 BC093857 BC093859 NM_001253748 NM_001253750 NM_172004	-64922	-	BC063128 NM_001197318 NM_013269 AK310150 NM_001004419 AK310554 AK313554 BC019883 AF133299 AF285087 CU676474 FN813349 FN813350 FN813351 NM_001197317 NM_001197319	-128531	+	AF175206 AF175207 AF267244 AF267245 NM_016523 AJ305370 BC096734 BC098166 BC098257 BC098354	29298	+	X96719 AY142147 AB015628 BC005254 AK311232 TSC_hg19_v1_chr12_-_10021954 AK313916 AK307334	71160	-	NM_005127	71659	-	AY238518|CD69|969|CD69 molecule##DQ893175|CD69|969|CD69 molecule##DQ896474|CD69|969|CD69 molecule##L07555|CD69|969|CD69 molecule##AK291869|CD69|969|CD69 molecule##AK303174|CD69|969|CD69 molecule##AK303383|CD69|969|CD69 molecule##BC007037|CD69|969|CD69 molecule##NM_001781|CD69|969|CD69 molecule##Z22576|CD69|969|CD69 molecule##AF518873|CLECL1|160365|C-type lectin-like 1##BC093857|CLECL1|160365|C-type lectin-like 1##BC093859|CLECL1|160365|C-type lectin-like 1##NM_001253748|CLECL1|160365|C-type lectin-like 1##NM_001253750|CLECL1|160365|C-type lectin-like 1##NM_172004|CLECL1|160365|C-type lectin-like 1##BC063128|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D##NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D##AK310150|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D##AK310554|CLEC2D|29121|C-type lectin domain family 2, member D##AK313554|CLEC2D|29121|C-type lectin domain family 2, member D##BC019883|CLEC2D|29121|C-type lectin domain family 2, member D##AF133299|CLEC2D|29121|C-type lectin domain family 2, member D##AF285087|CLEC2D|29121|C-type lectin domain family 2, member D##FN813349|CLEC2D|29121|C-type lectin domain family 2, member D##FN813350|CLEC2D|29121|C-type lectin domain family 2, member D##FN813351|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D##AF175206|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF175207|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267244|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267245|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##NM_016523|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AJ305370|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC096734|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098166|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098257|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098354|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##X96719|CLEC2B|9976|C-type lectin domain family 2, member B##AY142147|CLEC2B|9976|C-type lectin domain family 2, member B##AB015628|CLEC2B|9976|C-type lectin domain family 2, member B##BC005254|CLEC2B|9976|C-type lectin domain family 2, member B##AK311232|CLEC2B|9976|C-type lectin domain family 2, member B##AK313916|CLEC2B|9976|C-type lectin domain family 2, member B##AK307334|CLEC2B|9976|C-type lectin domain family 2, member B##NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B	0.291892	CTCF.p2:14:0.292
chr6	39277835	39277954	reg1000970.p1	17.417	+	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	-80654	-	TSC_hg19_v1_chr6_-_39082938 CR627244 AK001963 NM_018322 EU832483 EU832563 BC022007	-195048	-	AF086405 TSC_hg19_v1_chr6_-_39072506	-205435	-	AF358910 CU693040 DQ891712 DQ894889 EU978944 BC025726 AY358853 AF339912 AK310582 AK315273 NM_031460 NM_001135111	4271	-	AF358909 AY253145 AY253146 AY253147 BC111860 NM_001135105 NM_001135106 NM_001135107 NM_032115 EU978943	12445	-	BC117307 BC143444 BC143445 AK131471 NM_145027	415251	-	AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5##CR627244|C6orf64|55776|chromosome 6 open reading frame 64##AK001963|C6orf64|55776|chromosome 6 open reading frame 64##NM_018322|C6orf64|55776|chromosome 6 open reading frame 64##EU832483|C6orf64|55776|chromosome 6 open reading frame 64##EU832563|C6orf64|55776|chromosome 6 open reading frame 64##BC022007|C6orf64|55776|chromosome 6 open reading frame 64##AF086405|C6orf64|55776|chromosome 6 open reading frame 64##AF358910|KCNK17|89822|potassium channel, subfamily K, member 17##DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17##DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17##EU978944|KCNK17|89822|potassium channel, subfamily K, member 17##BC025726|KCNK17|89822|potassium channel, subfamily K, member 17##AY358853|KCNK17|89822|potassium channel, subfamily K, member 17##AF339912|KCNK17|89822|potassium channel, subfamily K, member 17##AK310582|KCNK17|89822|potassium channel, subfamily K, member 17##AK315273|KCNK17|89822|potassium channel, subfamily K, member 17##NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17##NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17##AF358909|KCNK16|83795|potassium channel, subfamily K, member 16##AY253145|KCNK16|83795|potassium channel, subfamily K, member 16##AY253146|KCNK16|83795|potassium channel, subfamily K, member 16##AY253147|KCNK16|83795|potassium channel, subfamily K, member 16##BC111860|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135105|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135106|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135107|KCNK16|83795|potassium channel, subfamily K, member 16##NM_032115|KCNK16|83795|potassium channel, subfamily K, member 16##EU978943|KCNK16|83795|potassium channel, subfamily K, member 16##BC117307|KIF6|221458|kinesin family member 6##BC143444|KIF6|221458|kinesin family member 6##BC143445|KIF6|221458|kinesin family member 6##AK131471|KIF6|221458|kinesin family member 6##NM_145027|KIF6|221458|kinesin family member 6	0.998703	CTCF.p2:4:0.999
chr15	69168282	69168405	reg1000771.p1	17.416	+	TSC_hg19_v1_chr15_-_69113264 NM_006305	-55083	-	TSC_hg19_v1_chr15_-_69113235 BC007200 BC000608 AF025684 AK312703	-55116	-	AB463390 AY349171 BC106719 BC125143 BT007436 DQ893294 DQ896729 U60823 TSC_hg19_v1_chr15_-_69113208 U73477 X75090 AK223280	-55194	-	NM_001184780 NM_145658 AY358983 AF325189 AF325190 BC017998 AF275321 BC125097 BC125098 CU676134	54572	+	NM_001184779 NM_024505 AF353088 AF353089 AK314689 AK074071	138708	+	TSC_hg19_v1_chr15_+_69452935 BC142975 AY635582 NM_015554 AK098595 BC033828 BC019011	284555	+	NM_006305|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC007200|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC000608|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AF025684|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK312703|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AY349171|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC106719|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC125143|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BT007436|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ893294|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ896729|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U60823|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U73477|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##X75090|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK223280|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##NM_001184780|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_145658|SPESP1|246777|sperm equatorial segment protein 1##AY358983|SPESP1|246777|sperm equatorial segment protein 1##AF325189|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF325190|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC017998|SPESP1|246777|sperm equatorial segment protein 1##AF275321|SPESP1|246777|sperm equatorial segment protein 1##BC125097|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC125098|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AY635582|GLCE|26035|glucuronic acid epimerase##NM_015554|GLCE|26035|glucuronic acid epimerase	0.994198	CTCF.p2:16:0.994
chr12	94926685	94926829	reg1000968.p1	17.415	+	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-73025	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-73115	-	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	-73226	-	EU831778 EU831856 BC040535 NM_020698	117507	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	470713	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	470759	-	BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	0.23394	CTCF.p2:17:0.234
chr16	57451053	57451181	reg1000744.p1	17.415	+	BC069107 NM_002987 BC112066 BC112068	-12422	+	TSC_hg19_v1_chr16_+_57406401 AK223351 AK313806 U84487 U91835 BC001163 BC016164 NM_002996 AB590256 DQ890704 DQ891871 DQ893888 DQ895059 CU674588 CR457426	-44678	+	AK222692 TSC_hg19_v1_chr16_+_57406382	-44732	+	BC036316 TSC_hg19_v1_chr16_-_57481298 AK074263 BC002568 AK292281 AL136613 BC071740 BC024196 AF248964 NM_020313 BC067303	30237	-	AK075438 NM_020312 TSC_hg19_v1_chr16_+_57481390 AK295793 BC064946 AK293585 BC029341 BC054340 AF161444 AK290627 AK303527 CU687976 EU832506 EU832587	30259	+	TSC_hg19_v1_chr16_+_57496563 NM_032940	45441	+	BC069107|CCL17|6361|chemokine (C-C motif) ligand 17##NM_002987|CCL17|6361|chemokine (C-C motif) ligand 17##BC112066|CCL17|6361|chemokine (C-C motif) ligand 17##BC112068|CCL17|6361|chemokine (C-C motif) ligand 17##AK223351|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK313806|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U84487|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U91835|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC001163|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC016164|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002996|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ890704|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ891871|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ893888|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ895059|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##CR457426|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK222692|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK075438|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_020312|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK295793|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC064946|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK293585|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC029341|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC054340|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AF161444|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK290627|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK303527|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832506|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832587|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	0.889638	CTCF.p2:16:0.890
chr19	39888416	39888534	reg1000506.p1	17.415	+	TSC_hg19_v1_chr19_+_39882046 AL137304 AK000411 AK298014 BC019015 AK092909 AX747802 AK124629 AK316010 AK090877 AK297772 AX746660 AK294667	-6437	+	AK300563 TSC_hg19_v1_chr19_+_39882017 AY729650 NM_017592 AB528726	-6492	+	AK098423 AJ401156 BC000017 NM_019088 TSC_hg19_v1_chr19_-_39881747 AK001985 BC013402 AK294625	-6781	-	TSC_hg19_v1_chr19_+_39897486 AK314042 M92843 NM_003407 BC009693 M63625 EU446714 EU832179 EU832272 CU679443	9299	+	TSC_hg19_v1_chr19_+_39899749 AJ227917	11318	+	AK024429 NM_022835	15274	+	AL137304|MED29|55588|mediator complex subunit 29##AK000411|MED29|55588|mediator complex subunit 29##AK298014|MED29|55588|mediator complex subunit 29##BC019015|MED29|55588|mediator complex subunit 29##AK092909|MED29|55588|mediator complex subunit 29##AK124629|MED29|55588|mediator complex subunit 29##AK316010|MED29|55588|mediator complex subunit 29##AK090877|MED29|55588|mediator complex subunit 29##AK297772|MED29|55588|mediator complex subunit 29##AK294667|MED29|55588|mediator complex subunit 29##AK300563|MED29|55588|mediator complex subunit 29##AY729650|MED29|55588|mediator complex subunit 29##NM_017592|MED29|55588|mediator complex subunit 29##AK098423|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AJ401156|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##BC000017|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##NM_019088|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK001985|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##BC013402|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK294625|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK314042|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##M92843|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##NM_003407|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##BC009693|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##M63625|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU446714|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU832179|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU832272|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2##NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2	0.999404	CTCF.p2:-8:0.999
chr10	82459396	82459533	reg1001132.p1	17.408	+	AK123978 NM_001145719	-158890	+	AK123885 NM_207372	-161807	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-245360	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	1175618	+	DQ857894 NM_001165973	1177978	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3439793	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	1.025593	CTCF.p2:-13:0.999
chr15	85498691	85498806	reg1000928.p1	17.408	+	AK291997 AK296075 AK298369 AK296074 AK296119 AK309571 AK311387 AK309578 AF309632 NM_004213 NM_201651 BC029788	-70837	+	AY044449 NM_020778	-138838	+	TSC_hg19_v1_chr15_+_85291875 BC094688	-206886	+	TSC_hg19_v1_chr15_+_85523735 BC060762 AK074280 NM_001243137	24954	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	26489	+	BC075822 TSC_hg19_v1_chr15_+_85525333	26578	+	AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AY044449|ALPK3|57538|alpha-kinase 3##NM_020778|ALPK3|57538|alpha-kinase 3##BC094688|ZNF592|9640|zinc finger protein 592##BC060762|PDE8A|5151|phosphodiesterase 8A##AK074280|PDE8A|5151|phosphodiesterase 8A##NM_001243137|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A	0.112335	
chr17	43212758	43212889	reg1000750.p1	17.407	+	NM_001135704 TSC_hg19_v1_chr17_+_43209980 BC041143	-2841	+	AB075844 AL834392 AB384653 TSC_hg19_v1_chr17_-_43209885 BC072384 AK074240 NM_133373	-3008	-	TSC_hg19_v1_chr17_+_43138687 BC006538 BC006569 NM_021079 AF043324 AK291936 AK303517 AB527516 BC008579 AF020500	-74131	+	AK316359 NM_001135705 NM_001135706 NM_001135707 NM_024722 BC022000 AK296167 TSC_hg19_v1_chr17_+_43213056 AK023384 AK075104 BC029164 AB073387	234	+	NM_006460	11860	+	TSC_hg19_v1_chr17_+_43225841 AK023624 AB021179	13028	+	NM_001135704|ACBD4|79777|acyl-CoA binding domain containing 4##BC041143|ACBD4|79777|acyl-CoA binding domain containing 4##AB075844|PLCD3|113026|phospholipase C, delta 3##AL834392|PLCD3|113026|phospholipase C, delta 3##BC072384|PLCD3|113026|phospholipase C, delta 3##AK074240|PLCD3|113026|phospholipase C, delta 3##NM_133373|PLCD3|113026|phospholipase C, delta 3##BC006538|NMT1|4836|N-myristoyltransferase 1##BC006569|NMT1|4836|N-myristoyltransferase 1##NM_021079|NMT1|4836|N-myristoyltransferase 1##AF043324|NMT1|4836|N-myristoyltransferase 1##AK291936|NMT1|4836|N-myristoyltransferase 1##AK303517|NMT1|4836|N-myristoyltransferase 1##BC008579|NMT1|4836|N-myristoyltransferase 1##AF020500|NMT1|4836|N-myristoyltransferase 1##AK316359|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135705|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135706|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135707|ACBD4|79777|acyl-CoA binding domain containing 4##NM_024722|ACBD4|79777|acyl-CoA binding domain containing 4##BC022000|ACBD4|79777|acyl-CoA binding domain containing 4##AK296167|ACBD4|79777|acyl-CoA binding domain containing 4##AK023384|ACBD4|79777|acyl-CoA binding domain containing 4##AK075104|ACBD4|79777|acyl-CoA binding domain containing 4##BC029164|ACBD4|79777|acyl-CoA binding domain containing 4##AB073387|ACBD4|79777|acyl-CoA binding domain containing 4##NM_006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK023624|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AB021179|HEXIM1|10614|hexamethylene bis-acetamide inducible 1	1.952133	CTCF.p2:6:0.952	CTCF.p2:-33:1.000
chr17	72653692	72653806	reg1000607.p2	17.405	+	BC100888 BC100889 BC100890 AK298031 AF395839 BX648376 AK303545 NM_181449	-33904	-	EF137868 NM_001115152 AY358148	-65354	-	AK056444 NM_152460	-72693	+	NM_175738 TSC_hg19_v1_chr17_+_72667269 BC040547 AK290202	13518	+	TSC_hg19_v1_chr17_+_72667316 AK054846	13568	+	AF251706 AY303545 AK315165 TSC_hg19_v1_chr17_-_72709081 AK298752 AY358545 AK092757 AX747710 NM_139018 BC028199	55318	-	BC100888|CD300E|342510|CD300e molecule##BC100889|CD300E|342510|CD300e molecule##BC100890|CD300E|342510|CD300e molecule##AK298031|CD300E|342510|CD300e molecule##AF395839|CD300E|342510|CD300e molecule##BX648376|CD300E|342510|CD300e molecule##AK303545|CD300E|342510|CD300e molecule##NM_181449|CD300E|342510|CD300e molecule##EF137868|CD300LD|100131439|CD300 molecule-like family member d##NM_001115152|CD300LD|100131439|CD300 molecule-like family member d##AY358148|CD300LD|100131439|CD300 molecule-like family member d##AK056444|C17orf77|146723|chromosome 17 open reading frame 77##NM_152460|C17orf77|146723|chromosome 17 open reading frame 77##NM_175738|RAB37|326624|RAB37, member RAS oncogene family##BC040547|RAB37|326624|RAB37, member RAS oncogene family##AK290202|RAB37|326624|RAB37, member RAS oncogene family##AK054846|RAB37|326624|RAB37, member RAS oncogene family##AF251706|CD300LF|146722|CD300 molecule-like family member f##AY303545|CD300LF|146722|CD300 molecule-like family member f##AK315165|CD300LF|146722|CD300 molecule-like family member f##AK298752|CD300LF|146722|CD300 molecule-like family member f##AY358545|CD300LF|146722|CD300 molecule-like family member f##AK092757|CD300LF|146722|CD300 molecule-like family member f##NM_139018|CD300LF|146722|CD300 molecule-like family member f##BC028199|CD300LF|146722|CD300 molecule-like family member f	0.550413	CTCF.p2:-3:0.550
chr2	120165424	120165553	reg1000745.p1	17.405	+	M14200 NM_001079863 AM000001	-40291	+	FM213127 NM_001178017	-40660	+	TSC_hg19_v1_chr2_+_120124662 BC062996	-40829	+	TSC_hg19_v1_chr2_+_120189433 NM_183240	23922	+	AY462218 CU690190 AB527596 U20178 U28281 TSC_hg19_v1_chr2_-_120281970	116397	-	TSC_hg19_v1_chr2_-_120282018 AK314638 NM_002980	116531	-	M14200|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001079863|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##AM000001|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213127|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178017|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##BC062996|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_183240|TMEM37|140738|transmembrane protein 37##AY462218|SCTR|6344|secretin receptor##U20178|SCTR|6344|secretin receptor##U28281|SCTR|6344|secretin receptor##AK314638|SCTR|6344|secretin receptor##NM_002980|SCTR|6344|secretin receptor	0.933189	CTCF.p2:-20:0.933
chr6	170826238	170826355	reg1000893.p1	17.401	+	TSC_hg19_v1_chr6_+_170615849 AB058741 AL832883	-210416	+	TSC_hg19_v1_chr6_+_170615846 BC012177 NM_032448 AK296825 AK296730	-210453	+	TSC_hg19_v1_chr6_+_170615836 DQ873695 AK056435	-210488	+	TSC_hg19_v1_chr6_-_170862371 AB451312 AB451442 AB528712 BT019720 CU676728 EU176329 EU176672 D00761 AB209078 AK223193 BC000508 BC020807	36054	-	TSC_hg19_v1_chr6_-_170862392 AK058050 NM_002793	36101	-	NM_001172085 NM_003194 AK304648 TSC_hg19_v1_chr6_+_170863459 AK315222 BC110341 Z22828 AK298272 M55654 BC109054 BC109053	37168	+	AB058741|FAM120B|84498|family with sequence similarity 120B##AL832883|FAM120B|84498|family with sequence similarity 120B##BC012177|FAM120B|84498|family with sequence similarity 120B##NM_032448|FAM120B|84498|family with sequence similarity 120B##AK296825|FAM120B|84498|family with sequence similarity 120B##AK296730|FAM120B|84498|family with sequence similarity 120B##DQ873695|FAM120B|84498|family with sequence similarity 120B##AK056435|FAM120B|84498|family with sequence similarity 120B##AB451312|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##AB451442|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##BT019720|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##EU176329|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##EU176672|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##D00761|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##AB209078|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##AK223193|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##BC000508|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##BC020807|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##AK058050|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##NM_002793|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##NM_001172085|TBP|6908|TATA box binding protein##NM_003194|TBP|6908|TATA box binding protein##AK304648|TBP|6908|TATA box binding protein##AK315222|TBP|6908|TATA box binding protein##BC110341|TBP|6908|TATA box binding protein##Z22828|TBP|6908|TATA box binding protein##AK298272|TBP|6908|TATA box binding protein##M55654|TBP|6908|TATA box binding protein##BC109054|TBP|6908|TATA box binding protein##BC109053|TBP|6908|TATA box binding protein	0.851097	CTCF.p2:8:0.851
chr7	151012286	151012407	reg1000767.p1	17.401	+	BX648385 TSC_hg19_v1_chr7_-_150974229 NM_003078 U66619	-38117	-	AY450431 BC002628 NM_001003802	-38527	-	TSC_hg19_v1_chr7_-_150946031 AY450430	-66305	-	TSC_hg19_v1_chr7_+_151038874 NM_001243351 NM_016118 AF300717	26496	+	TSC_hg19_v1_chr7_+_151038909 AF459743 AY129295 AK293159 AF155099	26568	+	AK056624 TSC_hg19_v1_chr7_-_151071775	59390	-	BX648385|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_003078|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##U66619|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##AY450431|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##BC002628|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_001003802|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##AY450430|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_001243351|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_016118|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF300717|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF459743|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AY129295|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AK293159|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF155099|NUB1|51667|negative regulator of ubiquitin-like proteins 1	0.99151	CTCF.p2:-18:0.992
chr1	1057606	1057730	reg1000920.p1	17.397	+	NM_017891	-5933	-	AK301998 TSC_hg19_v1_chr1_-_1051470 AK057368 AK124054 AK128434 AK000591 AY358490	-6192	-	AK296576 NM_001205252	-47982	-	TSC_hg19_v1_chr1_+_1072275 BC028014	14667	+	TSC_hg19_v1_chr1_+_1076275 BC131698	18646	+	BC027945 AK124125 NM_001130045	51615	+	NM_017891|C1orf159|54991|chromosome 1 open reading frame 159##AK301998|C1orf159|54991|chromosome 1 open reading frame 159##AK057368|C1orf159|54991|chromosome 1 open reading frame 159##AK124054|C1orf159|54991|chromosome 1 open reading frame 159##AK128434|C1orf159|54991|chromosome 1 open reading frame 159##AK000591|C1orf159|54991|chromosome 1 open reading frame 159##AY358490|C1orf159|54991|chromosome 1 open reading frame 159##AK296576|RNF223|401934|ring finger protein 223##NM_001205252|RNF223|401934|ring finger protein 223##BC028014|LOC254099|254099|uncharacterized LOC254099##BC131698|LOC254099|254099|uncharacterized LOC254099##BC027945|TTLL10|254173|tubulin tyrosine ligase-like family, member 10##AK124125|TTLL10|254173|tubulin tyrosine ligase-like family, member 10##NM_001130045|TTLL10|254173|tubulin tyrosine ligase-like family, member 10	0.337836	CTCF.p2:-16:0.338
chr12	133100528	133100659	reg1001231.p1	17.397	+	NM_001142641	-33437	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-194736	-	AF458594 NM_021808	-410021	-	NM_001195520	86443	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	94811	+	BC021559 TSC_hg19_v1_chr12_-_133215909	115249	-	NM_001142641|FBRSL1|57666|fibrosin-like 1##BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC021559|POLE|5426|polymerase (DNA directed), epsilon	0.983165	CTCF.p2:6:0.983
chr16	58521736	58521867	reg1001051.p1	17.396	+	NM_022910	-23076	+	TSC_hg19_v1_chr16_+_58498222 AK126574 CR936733	-23539	+	TSC_hg19_v1_chr16_+_58498185 AK126729	-23608	+	AK055038 AB044944 AB044945 AK131248 AK296415 AK299949 AK316089 NM_001242833 NM_001242834 NM_001242835 NM_001242836 TSC_hg19_v1_chr16_+_58534048 BC011795 AB033006 AL136584 BC001527 AB385436 AM393094 AM393323	12297	+	NM_001160305 NM_024860 TSC_hg19_v1_chr16_+_58549420 AK127136 BC110433 AK304822 AK290495 AK309468 BC022451 AK024801 AK297288 AB590837 CU692624	27610	+	TSC_hg19_v1_chr16_-_58663731 BX647815	141928	-	NM_022910|NDRG4|65009|NDRG family member 4##AK126574|NDRG4|65009|NDRG family member 4##CR936733|NDRG4|65009|NDRG family member 4##AK126729|NDRG4|65009|NDRG family member 4##AK055038|NDRG4|65009|NDRG family member 4##AB044944|NDRG4|65009|NDRG family member 4##AB044945|NDRG4|65009|NDRG family member 4##AK131248|NDRG4|65009|NDRG family member 4##AK296415|NDRG4|65009|NDRG family member 4##AK299949|NDRG4|65009|NDRG family member 4##AK316089|NDRG4|65009|NDRG family member 4##NM_001242833|NDRG4|65009|NDRG family member 4##NM_001242834|NDRG4|65009|NDRG family member 4##NM_001242835|NDRG4|65009|NDRG family member 4##NM_001242836|NDRG4|65009|NDRG family member 4##BC011795|NDRG4|65009|NDRG family member 4##AB033006|NDRG4|65009|NDRG family member 4##AL136584|NDRG4|65009|NDRG family member 4##BC001527|NDRG4|65009|NDRG family member 4##AM393094|NDRG4|65009|NDRG family member 4##AM393323|NDRG4|65009|NDRG family member 4##NM_001160305|SETD6|79918|SET domain containing 6##NM_024860|SETD6|79918|SET domain containing 6##AK127136|SETD6|79918|SET domain containing 6##BC110433|SETD6|79918|SET domain containing 6##AK304822|SETD6|79918|SET domain containing 6##AK290495|SETD6|79918|SET domain containing 6##AK309468|SETD6|79918|SET domain containing 6##BC022451|SETD6|79918|SET domain containing 6##AK024801|SETD6|79918|SET domain containing 6##AK297288|SETD6|79918|SET domain containing 6##BX647815|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	0.985749	CTCF.p2:0:0.986
chr8	10447754	10447854	reg1000385.p1	17.394	+	BC033497 NM_001197020 NM_198464 AY358867	-64737	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	-494741	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	-535925	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	64836	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	82355	+	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	140180	-	BC033497|PRSS55|203074|protease, serine, 55##NM_001197020|PRSS55|203074|protease, serine, 55##NM_198464|PRSS55|203074|protease, serine, 55##AY358867|PRSS55|203074|protease, serine, 55##AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7	1.010607	CTCF.p2:4:0.999
chr15	65102219	65102359	reg1000885.p1	17.393	+	BC131612 BC148208 AY369207 NM_194272 TSC_hg19_v1_chr15_-_65067789 AK127873	-34543	-	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	-106820	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	-106887	-	BC137503 BC137504 TSC_hg19_v1_chr15_-_65117814 BC018978 AK026345 EU084033 NM_025049 AB185926 AB185927	15546	-	AK311036 NM_001195059 NM_025201 TSC_hg19_v1_chr15_+_65134113 AK096203 BC008744 AF494534	31818	+	TSC_hg19_v1_chr15_+_65204100 AK098736 NM_182703 AK075298 BC110610 AK307698	101800	+	BC131612|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC148208|RBPMS2|348093|RNA binding protein with multiple splicing 2##AY369207|RBPMS2|348093|RNA binding protein with multiple splicing 2##NM_194272|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK127873|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2##BC137503|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC137504|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC018978|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AK026345|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##EU084033|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_025049|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185926|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185927|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_001195059|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##NM_025201|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK096203|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC008744|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AF494534|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK098736|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##NM_182703|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK075298|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##BC110610|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK307698|ANKDD1A|348094|ankyrin repeat and death domain containing 1A	0.998668	CTCF.p2:7:0.999
chr17	45393150	45393276	reg1000803.p1	17.391	+	TSC_hg19_v1_chr17_+_45331260 AK300424	-61955	+	AY826979 TSC_hg19_v1_chr17_+_45331224 AB587392 U95204	-61989	+	TSC_hg19_v1_chr17_+_45331192 BC127666 BC127667 J02703 NM_000212 M35999 M20311	-62029	+	BC044604 TSC_hg19_v1_chr17_+_45401141	7928	+	TSC_hg19_v1_chr17_+_45401357 NM_001195192 NM_152347 BC036407 BC037876	8119	+	TSC_hg19_v1_chr17_-_45569837 BC090855 BC067758	176631	-	AY826979|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##U95204|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127666|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127667|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##J02703|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##NM_000212|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M35999|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M20311|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC044604|C17orf57|124989|chromosome 17 open reading frame 57##NM_001195192|C17orf57|124989|chromosome 17 open reading frame 57##NM_152347|C17orf57|124989|chromosome 17 open reading frame 57##BC036407|C17orf57|124989|chromosome 17 open reading frame 57##BC037876|C17orf57|124989|chromosome 17 open reading frame 57##BC090855|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2##BC067758|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2	0.331867	CTCF.p2:7:0.332
chr9	14353591	14353711	reg1000620.p3	17.387	+	TSC_hg19_v1_chr9_-_14314141 BX648845 NM_001190737 NM_005596	-39561	-	TSC_hg19_v1_chr9_-_14313945 U70862	-39699	-	TSC_hg19_v1_chr9_-_14313900 AK299605	-39748	-	AK131233 NM_001190738	45330	-	AF161360 TSC_hg19_v1_chr9_-_14693311 AK292960	339669	-	TSC_hg19_v1_chr9_-_14693475 BC042558 NM_178566	339818	-	BX648845|NFIB|4781|nuclear factor I/B##NM_001190737|NFIB|4781|nuclear factor I/B##NM_005596|NFIB|4781|nuclear factor I/B##U70862|NFIB|4781|nuclear factor I/B##AK299605|NFIB|4781|nuclear factor I/B##AK131233|NFIB|4781|nuclear factor I/B##NM_001190738|NFIB|4781|nuclear factor I/B##AF161360|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AK292960|ZDHHC21|340481|zinc finger, DHHC-type containing 21##BC042558|ZDHHC21|340481|zinc finger, DHHC-type containing 21##NM_178566|ZDHHC21|340481|zinc finger, DHHC-type containing 21	0.992411	CTCF.p2:3:0.992
chr1	36653864	36653999	reg1000886.p1	17.386	+	TSC_hg19_v1_chr1_+_36636693 AF218002 BC111428	-17155	+	TSC_hg19_v1_chr1_+_36621782 BC057293 AF064852 AK096341 BC106053 NM_018067	-32119	+	TSC_hg19_v1_chr1_+_36621723 AB033013	-32329	+	TSC_hg19_v1_chr1_+_36690029 NM_005119	36083	+	TSC_hg19_v1_chr1_+_36690047 BC065519 BC010997 AF117756 BC002501 BC019076 BC112330 BC112350	36131	+	EU446755 TSC_hg19_v1_chr1_+_36748231	94269	+	AF218002|MAP7D1|55700|MAP7 domain containing 1##BC111428|MAP7D1|55700|MAP7 domain containing 1##BC057293|MAP7D1|55700|MAP7 domain containing 1##AF064852|MAP7D1|55700|MAP7 domain containing 1##AK096341|MAP7D1|55700|MAP7 domain containing 1##BC106053|MAP7D1|55700|MAP7 domain containing 1##NM_018067|MAP7D1|55700|MAP7 domain containing 1##AB033013|MAP7D1|55700|MAP7 domain containing 1##NM_005119|THRAP3|9967|thyroid hormone receptor associated protein 3##BC065519|THRAP3|9967|thyroid hormone receptor associated protein 3##BC010997|THRAP3|9967|thyroid hormone receptor associated protein 3##AF117756|THRAP3|9967|thyroid hormone receptor associated protein 3##BC002501|THRAP3|9967|thyroid hormone receptor associated protein 3##BC019076|THRAP3|9967|thyroid hormone receptor associated protein 3##BC112330|THRAP3|9967|thyroid hormone receptor associated protein 3##BC112350|THRAP3|9967|thyroid hormone receptor associated protein 3##EU446755|THRAP3|9967|thyroid hormone receptor associated protein 3	0.977743	CTCF.p2:13:0.978
chr17	20025071	20025204	reg1001055.p1	17.386	+	AY816328 AY816329 NM_001033553 NM_152904 AB041533	-34803	+	TSC_hg19_v1_chr17_+_19976949 AK314341	-48235	+	TSC_hg19_v1_chr17_+_19912678 AK094274 NM_001243439 AK295093	-112469	+	TSC_hg19_v1_chr17_+_20059384 NM_001033554 NM_001033555 NM_001243438 AK301318 AK304186 AY816326 AY816327 BC021123 BC050058	34197	+	BC033618 TSC_hg19_v1_chr17_+_20108434 AK298601	83297	+	TSC_hg19_v1_chr17_+_20224469 BC036241	199329	+	AY816328|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816329|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033553|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_152904|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AB041533|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK314341|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001243439|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK295093|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033554|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033555|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001243438|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK301318|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK304186|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816326|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816327|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC021123|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC050058|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC033618|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK298601|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC036241|CCDC144C|348254|coiled-coil domain containing 144C	0.998881	CTCF.p2:-11:0.999
chr18	60382156	60382286	reg1000832.p1	17.385	+	NM_017742 TSC_hg19_v1_chr18_+_60190696 BC006340	-191467	+	AB209762 AF018253 NM_003839 AB527346	-389671	+	TSC_hg19_v1_chr18_+_59855176 AB384606	-527011	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	443	+	TSC_hg19_v1_chr18_+_60383911 AB011178	1705	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	2087	+	NM_017742|ZCCHC2|54877|zinc finger, CCHC domain containing 2##BC006340|ZCCHC2|54877|zinc finger, CCHC domain containing 2##AB209762|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##AF018253|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_003839|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1	0.955558	CTCF.p2:-11:0.839
chr19	1113396	1113531	reg1000392.p1	17.380	+	TSC_hg19_v1_chr19_-_1111972 BC106021	-1476	-	TSC_hg19_v1_chr19_+_1104646 NM_001039848	-8826	+	TSC_hg19_v1_chr19_+_1104068 BC010157	-9371	+	TSC_hg19_v1_chr19_-_1132221 AK125139 AK296849 AK309167 NM_001100122	18786	-	TSC_hg19_v1_chr19_-_1174256 BC052799	60765	-	TSC_hg19_v1_chr19_-_1174260 AB023180	60796	-	BC106021|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##NM_001039848|GPX4|2879|glutathione peroxidase 4 (phospholipid hydroperoxidase)##BC010157|GPX4|2879|glutathione peroxidase 4 (phospholipid hydroperoxidase)##AK125139|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##AK296849|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##AK309167|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##NM_001100122|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##AB023180|SBNO2|22904|strawberry notch homolog 2 (Drosophila)	1.525832	CTCF.p2:-19:0.987	CTCF.p2:80:0.539
chr1	214502290	214502406	reg1000804.p1	17.376	+	TSC_hg19_v1_chr1_+_214454550 BC068511 BC049367 BC094747 BC057793 NM_020197 AF226053 BC098133 BC098276 BC098305 BC098335 BC028104 AK313868 AB590916 BC039890	-47911	+	BC024201 NM_002763	-340489	+	AK298182 TSC_hg19_v1_chr1_+_214161296 U44060	-341059	+	X82676 TSC_hg19_v1_chr1_-_214724620 BC017300 AK090596	222259	-	TSC_hg19_v1_chr1_-_214724946 AK298120 BX538306 AK291641	222551	-	TSC_hg19_v1_chr1_-_214724977 NM_005401	222650	-	BC068511|SMYD2|56950|SET and MYND domain containing 2##BC049367|SMYD2|56950|SET and MYND domain containing 2##BC094747|SMYD2|56950|SET and MYND domain containing 2##BC057793|SMYD2|56950|SET and MYND domain containing 2##NM_020197|SMYD2|56950|SET and MYND domain containing 2##AF226053|SMYD2|56950|SET and MYND domain containing 2##BC098133|SMYD2|56950|SET and MYND domain containing 2##BC098276|SMYD2|56950|SET and MYND domain containing 2##BC098305|SMYD2|56950|SET and MYND domain containing 2##BC098335|SMYD2|56950|SET and MYND domain containing 2##BC028104|SMYD2|56950|SET and MYND domain containing 2##AK313868|SMYD2|56950|SET and MYND domain containing 2##BC039890|SMYD2|56950|SET and MYND domain containing 2##BC024201|PROX1|5629|prospero homeobox 1##NM_002763|PROX1|5629|prospero homeobox 1##AK298182|PROX1|5629|prospero homeobox 1##U44060|PROX1|5629|prospero homeobox 1##X82676|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##BC017300|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK090596|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK298120|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK291641|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##NM_005401|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14	0.974235	CTCF.p2:8:0.974
chr17	16593309	16593435	reg1000305.p1	17.376	+	AK131401 NM_020787	-36211	-	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-120876	-	NM_001113567 NM_207387 TSC_hg19_v1_chr17_-_16395510	-197865	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	232	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	282032	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	352592	+	AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##NM_001113567|FAM211A|388341|family with sequence similarity 211, member A##NM_207387|FAM211A|388341|family with sequence similarity 211, member A##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein	2.996385	CTCF.p2:13:0.999	CTCF.p2:-34:0.999	CTCF.p2:61:0.999
chr5	71819909	71820051	reg1000793.p1	17.376	+	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	-16797	-	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-203758	+	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	-203778	+	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	292510	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	323961	+	TSC_hg19_v1_chr5_+_72143999 U72395 U72069	324027	+	BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2##NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1##U72395|TNPO1|3842|transportin 1##U72069|TNPO1|3842|transportin 1	0.172846	
chr1	116681790	116681940	reg1000657.p2	17.372	+	AK096035 NM_152367	-27490	+	TSC_hg19_v1_chr1_+_116519194 BC070033 AY358258 AY145501 CU693234 DQ892367 DQ895576	-162636	+	NM_018420 BC026358 TSC_hg19_v1_chr1_+_116519161	-162722	+	NM_000701 TSC_hg19_v1_chr1_+_116915824	233946	+	BC003077 TSC_hg19_v1_chr1_+_116915881 BC050359	234017	+	TSC_hg19_v1_chr1_+_116915952 AK314777	234083	+	AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)##BC070033|SLC22A15|55356|solute carrier family 22, member 15##AY358258|SLC22A15|55356|solute carrier family 22, member 15##AY145501|SLC22A15|55356|solute carrier family 22, member 15##DQ892367|SLC22A15|55356|solute carrier family 22, member 15##DQ895576|SLC22A15|55356|solute carrier family 22, member 15##NM_018420|SLC22A15|55356|solute carrier family 22, member 15##BC026358|SLC22A15|55356|solute carrier family 22, member 15##NM_000701|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC003077|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC050359|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK314777|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	1.521413	CTCF.p2:-31:1.000	CTCF.p2:35:0.522
chr10	6443856	6443976	reg1000466.p2	17.371	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-199040	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-257004	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-257032	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	178345	-	TSC_hg19_v1_chr10_+_6622460 AY007155	178564	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	1007334	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.664355	CTCF.p2:43:0.664
chr1	32429820	32429937	reg1000688.p1	17.366	+	TSC_hg19_v1_chr1_-_32403992 NM_080391	-25881	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	-25947	-	NM_001195100 NM_001195101	-44620	-	TSC_hg19_v1_chr1_+_32479463 AK293369 AK091346 AX746925 AK312916 AK303218 BC000717 BC019109 M88108 NM_006559 BC010132 AB590354 DQ895323 U78971	49620	+	TSC_hg19_v1_chr1_+_32538502 AK023331 NM_018056	108626	+	AL136695 TSC_hg19_v1_chr1_+_32538539 AK001177 BC004364 AK296653 AK298766 AK300293	108696	+	NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK023331|TMEM39B|55116|transmembrane protein 39B##NM_018056|TMEM39B|55116|transmembrane protein 39B##AL136695|TMEM39B|55116|transmembrane protein 39B##AK001177|TMEM39B|55116|transmembrane protein 39B##BC004364|TMEM39B|55116|transmembrane protein 39B##AK296653|TMEM39B|55116|transmembrane protein 39B##AK298766|TMEM39B|55116|transmembrane protein 39B##AK300293|TMEM39B|55116|transmembrane protein 39B	0.869177	CTCF.p2:4:0.869
chr2	46691745	46691871	reg1000935.p1	17.365	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	-166833	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	-167217	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-812734	+	NM_001145051	14895	+	BC034808 NM_080653	55287	-	TSC_hg19_v1_chr2_+_46769874 NM_012249 AK095329	78041	+	U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375##BC034808|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_080653|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_012249|RHOQ|23433|ras homolog gene family, member Q##AK095329|RHOQ|23433|ras homolog gene family, member Q	0.998928	CTCF.p2:-9:0.999
chr9	101026157	101026291	reg1000919.p1	17.363	+	TSC_hg19_v1_chr9_-_101018013 NM_018421	-8220	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	-8503	-	TSC_hg19_v1_chr9_-_100954922 AK292788 BC011690 AB209809 NM_052820	-71291	-	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	444961	-	CR749467 TSC_hg19_v1_chr9_-_101558801 NM_173551	532427	-	TSC_hg19_v1_chr9_+_101569953 AB527376 AB040673 AB078146 AJ132365 NM_024642	543766	+	NM_018421|TBC1D2|55357|TBC1 domain family, member 2##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##AK292788|CORO2A|7464|coronin, actin binding protein, 2A##BC011690|CORO2A|7464|coronin, actin binding protein, 2A##AB209809|CORO2A|7464|coronin, actin binding protein, 2A##NM_052820|CORO2A|7464|coronin, actin binding protein, 2A##DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##CR749467|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##NM_173551|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##AB040673|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AB078146|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AJ132365|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##NM_024642|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)	0.047868	
chr11	19585710	19585827	reg1000521.p1	17.361	+	AB063115 NM_001111018 AJ488205	-213453	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-322567	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-323293	-	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	149098	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	458620	+	TSC_hg19_v1_chr11_+_20049136 AK307574	463364	+	AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2	0.994116	CTCF.p2:-23:0.994
chr17	78549255	78549373	reg1000482.p1	17.360	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-30496	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-30665	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-98987	-	TSC_hg19_v1_chr17_+_78935064 BC073898	385818	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	416327	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	416380	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.704543	CTCF.p2:16:0.622
chr10	73656290	73656423	reg1000840.p1	17.357	+	TSC_hg19_v1_chr10_-_73611059 NM_001042465 NM_001042466 NM_002778	-45265	-	AK299184 TSC_hg19_v1_chr10_-_73611043	-45313	-	AK223290 AK293672 AK307721 TSC_hg19_v1_chr10_-_73611007 AK129790 J03077 AK057878 BC091483	-45339	-	TSC_hg19_v1_chr10_+_73723993 AB017915 NM_004273 AB012192	67701	+	AK292328 TSC_hg19_v1_chr10_-_73848270 AK294008 AK307091	191912	-	TSC_hg19_v1_chr10_-_73848286 AY358921	191926	-	NM_001042465|PSAP|5660|prosaposin##NM_001042466|PSAP|5660|prosaposin##NM_002778|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin##AK223290|PSAP|5660|prosaposin##AK293672|PSAP|5660|prosaposin##AK307721|PSAP|5660|prosaposin##AK129790|PSAP|5660|prosaposin##J03077|PSAP|5660|prosaposin##AK057878|PSAP|5660|prosaposin##BC091483|PSAP|5660|prosaposin##AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AY358921|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	0.998656	CTCF.p2:-29:0.999
chr17	48278133	48278295	reg1000126.p2	17.349	+	S67495 TSC_hg19_v1_chr17_-_48274424	-3801	-	Y15917 TSC_hg19_v1_chr17_-_48272117	-6169	-	X98707 TSC_hg19_v1_chr17_-_48271508	-6773	-	AB384988 DQ893571 EU176569 CU691368 M36546 X07884 AB209597 TSC_hg19_v1_chr17_-_48278986	716	-	TSC_hg19_v1_chr17_-_48278993 BC036531 Z74615 NM_000088	779	-	AY358204 NM_001168215	70552	+	DQ893571|COL1A1|1277|collagen, type I, alpha 1##EU176569|COL1A1|1277|collagen, type I, alpha 1##M36546|COL1A1|1277|collagen, type I, alpha 1##X07884|COL1A1|1277|collagen, type I, alpha 1##AB209597|COL1A1|1277|collagen, type I, alpha 1##BC036531|COL1A1|1277|collagen, type I, alpha 1##Z74615|COL1A1|1277|collagen, type I, alpha 1##NM_000088|COL1A1|1277|collagen, type I, alpha 1##AY358204|TMEM92|162461|transmembrane protein 92##NM_001168215|TMEM92|162461|transmembrane protein 92	0.990903	CTCF.p2:31:0.991
chr11	27205637	27205750	reg1000447.p1	17.347	+	NM_003986	-143185	+	TSC_hg19_v1_chr11_+_27015837 BC026873	-189849	+	TSC_hg19_v1_chr11_+_27015673 AK310616	-190023	+	AF382034 TSC_hg19_v1_chr11_-_27384763 AY598334 CU678989 AK313358 BC008496 AK308494 NM_030771 NM_080654	179073	-	TSC_hg19_v1_chr11_-_27494323 AB209743 AF257182 BC033039 NM_018490	288611	-	AB385247 BC053907 TSC_hg19_v1_chr11_-_27528315 BC009774 AK223156 AL833601 AK002077 NM_018362	322619	-	NM_003986|BBOX1|8424|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1##BC026873|FIBIN|387758|fin bud initiation factor homolog (zebrafish)##AF382034|CCDC34|91057|coiled-coil domain containing 34##AY598334|CCDC34|91057|coiled-coil domain containing 34##AK313358|CCDC34|91057|coiled-coil domain containing 34##BC008496|CCDC34|91057|coiled-coil domain containing 34##AK308494|CCDC34|91057|coiled-coil domain containing 34##NM_030771|CCDC34|91057|coiled-coil domain containing 34##NM_080654|CCDC34|91057|coiled-coil domain containing 34##AB209743|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF257182|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC033039|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##NM_018490|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)##BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)##AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)##AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)##AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)##NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)	0.240824	CTCF.p2:-14:0.241
chr17	75768629	75768753	reg1000959.p1	17.345	+	TSC_hg19_v1_chr17_+_75543021 AK096234	-225671	+	AK056495 NM_001113495	-297367	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-321302	+	BC039479 NM_001142640 NM_018996	231591	+	TSC_hg19_v1_chr17_-_76124768 AK074065	356081	-	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	356147	-	AK096234|LOC100507351|100507351|uncharacterized LOC100507351##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK074065|TMC6|11322|transmembrane channel-like 6##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6	0.0209	
chr19	47582692	47582821	reg1001081.p1	17.343	+	AK000519 NM_017854 TSC_hg19_v1_chr19_-_47551883 BC002907	-30860	-	AB054002 NM_002517 U77968	-58545	+	TSC_hg19_v1_chr19_+_47523068 BC039016	-59680	+	AK125279 TSC_hg19_v1_chr19_-_47615487	32730	-	TSC_hg19_v1_chr19_-_47615825 AB384098	33067	-	AB028987 NM_015168 TSC_hg19_v1_chr19_-_47617034	34266	-	AK000519|TMEM160|54958|transmembrane protein 160##NM_017854|TMEM160|54958|transmembrane protein 160##BC002907|TMEM160|54958|transmembrane protein 160##AB054002|NPAS1|4861|neuronal PAS domain protein 1##NM_002517|NPAS1|4861|neuronal PAS domain protein 1##U77968|NPAS1|4861|neuronal PAS domain protein 1##BC039016|NPAS1|4861|neuronal PAS domain protein 1##AK125279|ZC3H4|23211|zinc finger CCCH-type containing 4##AB028987|ZC3H4|23211|zinc finger CCCH-type containing 4##NM_015168|ZC3H4|23211|zinc finger CCCH-type containing 4	0.998699	CTCF.p2:-7:0.999
chr15	91599217	91599358	reg1000784.p1	17.331	+	BC016445 TSC_hg19_v1_chr15_-_91565785 AK074863 AF201694 AK315721 AF308803 AK027754 AK300608 AK293688 AK308480 NM_018668	-33517	-	CU677627 TSC_hg19_v1_chr15_-_91565525	-33785	-	AF044588 BC003138 TSC_hg19_v1_chr15_-_91537766 AK297117 AK304094 BC005140 AK312600 NM_003981 NM_199413 NM_199414	-61521	-	NM_001167580 TSC_hg19_v1_chr15_+_91643185 AK294902	43922	+	TSC_hg19_v1_chr15_+_91643505 NM_014848 BC030011	44199	+	TSC_hg19_v1_chr15_+_91643558 AF052188	44272	+	BC016445|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK074863|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AF201694|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK315721|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AF308803|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK027754|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK300608|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK293688|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK308480|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##NM_018668|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AF044588|PRC1|9055|protein regulator of cytokinesis 1##BC003138|PRC1|9055|protein regulator of cytokinesis 1##AK297117|PRC1|9055|protein regulator of cytokinesis 1##AK304094|PRC1|9055|protein regulator of cytokinesis 1##BC005140|PRC1|9055|protein regulator of cytokinesis 1##AK312600|PRC1|9055|protein regulator of cytokinesis 1##NM_003981|PRC1|9055|protein regulator of cytokinesis 1##NM_199413|PRC1|9055|protein regulator of cytokinesis 1##NM_199414|PRC1|9055|protein regulator of cytokinesis 1##NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B##AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_014848|SV2B|9899|synaptic vesicle glycoprotein 2B##BC030011|SV2B|9899|synaptic vesicle glycoprotein 2B##AF052188|SV2B|9899|synaptic vesicle glycoprotein 2B	0.023753	
chr22	20273366	20273501	reg1001180.p1	17.330	+	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	-17666	-	NM_001243537	-136003	-	TSC_hg19_v1_chr22_+_20119357 AY894890 BC053544 NM_001185024 NM_013373 AK131238	-154000	+	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	34136	-	NM_001242313	104235	+	BC072398 TSC_hg19_v1_chr22_-_20427830	154397	-	AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##NM_001243537|LOC388849|388849|uncharacterized LOC388849##AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8##BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8##AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_001242313|TMEM191B|728229|transmembrane protein 191B##BC072398|PI4KAP1|728233|phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1	0.9988	CTCF.p2:0:0.999
chr8	8527323	8527438	reg1000487.p1	17.330	+	AK122582 NM_001080826	-288158	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-351492	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-441238	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	32318	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	223558	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	332985	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.412239	CTCF.p2:40:0.412
chr20	34726673	34726805	reg1001064.p1	17.326	+	CR936825 NM_177996	-26437	+	TSC_hg19_v1_chr20_+_34680631 AK096848 AK299817 AK126875 BC040259	-46088	+	TSC_hg19_v1_chr20_-_34638883 BC011592 AK090641 AX746554 BC031254	-87835	-	TSC_hg19_v1_chr20_+_34742659 NM_012156 AB002336	15926	+	TSC_hg19_v1_chr20_+_34824399 AL117419	97650	+	TSC_hg19_v1_chr20_+_34824402 BC001751 BC019311 NM_015511	97684	+	CR936825|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##NM_177996|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK096848|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK299817|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK126875|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##BC040259|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##BC011592|LOC647979|647979|uncharacterized LOC647979##AK090641|LOC647979|647979|uncharacterized LOC647979##NM_012156|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AB002336|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AL117419|C20orf4|25980|chromosome 20 open reading frame 4##BC001751|C20orf4|25980|chromosome 20 open reading frame 4##BC019311|C20orf4|25980|chromosome 20 open reading frame 4##NM_015511|C20orf4|25980|chromosome 20 open reading frame 4	0.400159	CTCF.p2:12:0.400
chrX	73075485	73075616	reg1000980.p1	17.322	+	TSC_hg19_v1_chrX_+_72783126 AB529212 AK297768 BC050300 AL832095	-292324	+	TSC_hg19_v1_chrX_+_72783043 CR936642 BC127727 BC127728 BC136691 BC136692	-292495	+	TSC_hg19_v1_chrX_+_72782961 AK295903 NM_001039840	-292578	+	BC071776 TSC_hg19_v1_chrX_+_73164176 AK056172	88619	+	TSC_hg19_v1_chrX_-_73512419 AK057701	436855	-	TSC_hg19_v1_chrX_-_73513379 AK311345	437824	-	AK297768|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC050300|CHIC1|53344|cysteine-rich hydrophobic domain 1##AL832095|CHIC1|53344|cysteine-rich hydrophobic domain 1##CR936642|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC127727|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC127728|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC136691|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC136692|CHIC1|53344|cysteine-rich hydrophobic domain 1##AK295903|CHIC1|53344|cysteine-rich hydrophobic domain 1##NM_001039840|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC071776|JPX|554203|JPX transcript, XIST activator (non-protein coding)##AK056172|JPX|554203|JPX transcript, XIST activator (non-protein coding)##AK057701|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##AK311345|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)	0.999899	CTCF.p2:-6:1.000
chr1	28417840	28417972	reg1001045.p1	17.319	+	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-2782	-	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-131388	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-156345	+	NM_000952 NM_001164723	85548	-	S52624 AK292053 NM_001164721 NM_001164722	102506	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	141625	-	BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8	0.980185	CTCF.p2:-5:0.980
chr3	49876768	49876877	reg1000495.p1	17.317	+	TSC_hg19_v1_chr3_-_49851387 NM_003335 L13852	-25433	-	CU675375 BT007026 DQ893307 DQ893707 TSC_hg19_v1_chr3_-_49851326 BC006378	-25551	-	BC012170 NM_203370 TSC_hg19_v1_chr3_+_49840695	-36122	+	AB451320 AB451449 AB590668 CU674148 EF036504 TSC_hg19_v1_chr3_-_49894001 AK225873 BC000310 BC019283 AK292172 NM_005879 U77845 AK295780	17123	-	TSC_hg19_v1_chr3_-_49907340 BC019256 BC000497 BC001921 BC005828 BC017363 AK297437 BX647074 AK299953 AL136697 AK074899 AK297258 AK295588 AK075294 AK074856 NM_024046 AK315525	30523	-	TSC_hg19_v1_chr3_-_49941304 NM_001244937 NM_002447	64480	-	NM_003335|UBA7|7318|ubiquitin-like modifier activating enzyme 7##L13852|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BT007026|UBA7|7318|ubiquitin-like modifier activating enzyme 7##DQ893307|UBA7|7318|ubiquitin-like modifier activating enzyme 7##DQ893707|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BC006378|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BC012170|FAM212A|389119|family with sequence similarity 212, member A##NM_203370|FAM212A|389119|family with sequence similarity 212, member A##AB451320|TRAIP|10293|TRAF interacting protein##AB451449|TRAIP|10293|TRAF interacting protein##EF036504|TRAIP|10293|TRAF interacting protein##AK225873|TRAIP|10293|TRAF interacting protein##BC000310|TRAIP|10293|TRAF interacting protein##BC019283|TRAIP|10293|TRAF interacting protein##AK292172|TRAIP|10293|TRAF interacting protein##NM_005879|TRAIP|10293|TRAF interacting protein##U77845|TRAIP|10293|TRAF interacting protein##AK295780|TRAIP|10293|TRAF interacting protein##BC019256|CAMKV|79012|CaM kinase-like vesicle-associated##BC000497|CAMKV|79012|CaM kinase-like vesicle-associated##BC001921|CAMKV|79012|CaM kinase-like vesicle-associated##BC005828|CAMKV|79012|CaM kinase-like vesicle-associated##BC017363|CAMKV|79012|CaM kinase-like vesicle-associated##AK297437|CAMKV|79012|CaM kinase-like vesicle-associated##BX647074|CAMKV|79012|CaM kinase-like vesicle-associated##AK299953|CAMKV|79012|CaM kinase-like vesicle-associated##AL136697|CAMKV|79012|CaM kinase-like vesicle-associated##AK074899|CAMKV|79012|CaM kinase-like vesicle-associated##AK297258|CAMKV|79012|CaM kinase-like vesicle-associated##AK295588|CAMKV|79012|CaM kinase-like vesicle-associated##AK075294|CAMKV|79012|CaM kinase-like vesicle-associated##AK074856|CAMKV|79012|CaM kinase-like vesicle-associated##NM_024046|CAMKV|79012|CaM kinase-like vesicle-associated##AK315525|CAMKV|79012|CaM kinase-like vesicle-associated##NM_001244937|MST1R|4486|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)##NM_002447|MST1R|4486|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)	0.996944	CTCF.p2:4:0.997
chr16	48657219	48657358	reg1000871.p1	17.315	+	BC051897 TSC_hg19_v1_chr16_-_48644092 AB014515 BC152472 NM_153029	-13172	-	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	-238036	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	-257497	-	AB527638 TSC_hg19_v1_chr16_-_49315397	658105	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	658212	-	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	658446	-	BC051897|N4BP1|9683|NEDD4 binding protein 1##AB014515|N4BP1|9683|NEDD4 binding protein 1##BC152472|N4BP1|9683|NEDD4 binding protein 1##NM_153029|N4BP1|9683|NEDD4 binding protein 1##BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor	0.985204	CTCF.p2:14:0.985
chr15	75321754	75321874	reg1000509.p1	17.311	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-5833	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-5886	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-33907	+	AK128205 TSC_hg19_v1_chr15_+_75491259	169432	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	172398	+	BC110367 TSC_hg19_v1_chr15_+_75494233	172419	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.999666	CTCF.p2:-12:1.000
chr20	60957889	60958019	reg1000869.p1	17.311	+	AB587309 TSC_hg19_v1_chr20_-_60942345 BC015386 BC085017 AF443072 NM_005560	-15577	-	AB067494 TSC_hg19_v1_chr20_-_60927487	-30513	-	TSC_hg19_v1_chr20_+_60878052 BC017245 BC093021 BC003059 AK297567 D64154	-79894	+	NM_001024 TSC_hg19_v1_chr20_+_60962159 BC021990 D28422 BC027976 L04483 X79563 BC071927 BC018140	4197	+	TSC_hg19_v1_chr20_-_60982342 NM_031215	24390	-	AK074919 TSC_hg19_v1_chr20_-_61002592 AK290299 NM_080833	44654	-	BC015386|LAMA5|3911|laminin, alpha 5##BC085017|LAMA5|3911|laminin, alpha 5##AF443072|LAMA5|3911|laminin, alpha 5##NM_005560|LAMA5|3911|laminin, alpha 5##AB067494|LAMA5|3911|laminin, alpha 5##BC017245|ADRM1|11047|adhesion regulating molecule 1##BC093021|ADRM1|11047|adhesion regulating molecule 1##BC003059|ADRM1|11047|adhesion regulating molecule 1##AK297567|ADRM1|11047|adhesion regulating molecule 1##D64154|ADRM1|11047|adhesion regulating molecule 1##NM_001024|RPS21|6227|ribosomal protein S21##BC021990|RPS21|6227|ribosomal protein S21##BC027976|RPS21|6227|ribosomal protein S21##L04483|RPS21|6227|ribosomal protein S21##X79563|RPS21|6227|ribosomal protein S21##BC071927|RPS21|6227|ribosomal protein S21##BC018140|RPS21|6227|ribosomal protein S21##NM_031215|CABLES2|81928|Cdk5 and Abl enzyme substrate 2##AK074919|C20orf151|140893|chromosome 20 open reading frame 151##AK290299|C20orf151|140893|chromosome 20 open reading frame 151##NM_080833|C20orf151|140893|chromosome 20 open reading frame 151	0.14675	
chr4	76988940	76989062	reg1000435.p2	17.310	+	BT006787 AB590165 CU675091 DQ895703 EU176355 Y15220 U59286 U66096 BC005292 AF002985 AF030514 BC110986 AF352781 BC012532 NM_005409	-31757	-	AB529178 DQ892786 DQ896033 BC010954 X02530 NM_001565	-44365	-	NM_001130017 AK225860 AY543657 AY543658 AY543659 AY543656 U47054	-56607	+	AY543660 BC008397 BC017913 NM_001130016 NM_001179 AK295305 AK308810 AY543655	6868	+	TSC_hg19_v1_chr4_-_77069551 AB527805 DQ895978 EU176395 AK315160 AK001517 AK299442 AK300036 AK223352 AF157322 AK222752 AK307571 BC012559 BX538002 BC034226 NM_017426	80591	-	TSC_hg19_v1_chr4_-_77134713 AB384843 BT006939 CU692412 DQ893535 DQ893757 BC021892	145707	-	BT006787|CXCL11|6373|chemokine (C-X-C motif) ligand 11##DQ895703|CXCL11|6373|chemokine (C-X-C motif) ligand 11##EU176355|CXCL11|6373|chemokine (C-X-C motif) ligand 11##Y15220|CXCL11|6373|chemokine (C-X-C motif) ligand 11##U59286|CXCL11|6373|chemokine (C-X-C motif) ligand 11##U66096|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BC005292|CXCL11|6373|chemokine (C-X-C motif) ligand 11##AF002985|CXCL11|6373|chemokine (C-X-C motif) ligand 11##AF030514|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BC110986|CXCL11|6373|chemokine (C-X-C motif) ligand 11##AF352781|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BC012532|CXCL11|6373|chemokine (C-X-C motif) ligand 11##NM_005409|CXCL11|6373|chemokine (C-X-C motif) ligand 11##DQ892786|CXCL10|3627|chemokine (C-X-C motif) ligand 10##DQ896033|CXCL10|3627|chemokine (C-X-C motif) ligand 10##BC010954|CXCL10|3627|chemokine (C-X-C motif) ligand 10##X02530|CXCL10|3627|chemokine (C-X-C motif) ligand 10##NM_001565|CXCL10|3627|chemokine (C-X-C motif) ligand 10##NM_001130017|ART3|419|ADP-ribosyltransferase 3##AK225860|ART3|419|ADP-ribosyltransferase 3##AY543657|ART3|419|ADP-ribosyltransferase 3##AY543658|ART3|419|ADP-ribosyltransferase 3##AY543659|ART3|419|ADP-ribosyltransferase 3##AY543656|ART3|419|ADP-ribosyltransferase 3##U47054|ART3|419|ADP-ribosyltransferase 3##AY543660|ART3|419|ADP-ribosyltransferase 3##BC008397|ART3|419|ADP-ribosyltransferase 3##BC017913|ART3|419|ADP-ribosyltransferase 3##NM_001130016|ART3|419|ADP-ribosyltransferase 3##NM_001179|ART3|419|ADP-ribosyltransferase 3##AK295305|ART3|419|ADP-ribosyltransferase 3##AK308810|ART3|419|ADP-ribosyltransferase 3##AY543655|ART3|419|ADP-ribosyltransferase 3##DQ895978|NUP54|53371|nucleoporin 54kDa##EU176395|NUP54|53371|nucleoporin 54kDa##AK315160|NUP54|53371|nucleoporin 54kDa##AK001517|NUP54|53371|nucleoporin 54kDa##AK299442|NUP54|53371|nucleoporin 54kDa##AK300036|NUP54|53371|nucleoporin 54kDa##AK223352|NUP54|53371|nucleoporin 54kDa##AF157322|NUP54|53371|nucleoporin 54kDa##AK222752|NUP54|53371|nucleoporin 54kDa##AK307571|NUP54|53371|nucleoporin 54kDa##BC012559|NUP54|53371|nucleoporin 54kDa##BX538002|NUP54|53371|nucleoporin 54kDa##BC034226|NUP54|53371|nucleoporin 54kDa##NM_017426|NUP54|53371|nucleoporin 54kDa##BT006939|SCARB2|950|scavenger receptor class B, member 2##DQ893535|SCARB2|950|scavenger receptor class B, member 2##DQ893757|SCARB2|950|scavenger receptor class B, member 2##BC021892|SCARB2|950|scavenger receptor class B, member 2	0.920764	CTCF.p2:1:0.921
chr6	39134318	39134443	reg1000889.p1	17.308	+	TSC_hg19_v1_chr6_-_39082938 CR627244 AK001963 NM_018322 EU832483 EU832563 BC022007	-51534	-	AF086405 TSC_hg19_v1_chr6_-_39072506	-61921	-	BC112126 BC113493 NM_002062 TSC_hg19_v1_chr6_+_39016556 U01104 L23503 AB463688 U01156 U01157	-117794	+	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	62860	-	AF358910 CU693040 DQ891712 DQ894889 EU978944 BC025726 AY358853 AF339912 AK310582 AK315273 NM_031460 NM_001135111	147785	-	AF358909 AY253145 AY253146 AY253147 BC111860 NM_001135105 NM_001135106 NM_001135107 NM_032115 EU978943	155959	-	CR627244|C6orf64|55776|chromosome 6 open reading frame 64##AK001963|C6orf64|55776|chromosome 6 open reading frame 64##NM_018322|C6orf64|55776|chromosome 6 open reading frame 64##EU832483|C6orf64|55776|chromosome 6 open reading frame 64##EU832563|C6orf64|55776|chromosome 6 open reading frame 64##BC022007|C6orf64|55776|chromosome 6 open reading frame 64##AF086405|C6orf64|55776|chromosome 6 open reading frame 64##BC112126|GLP1R|2740|glucagon-like peptide 1 receptor##BC113493|GLP1R|2740|glucagon-like peptide 1 receptor##NM_002062|GLP1R|2740|glucagon-like peptide 1 receptor##U01104|GLP1R|2740|glucagon-like peptide 1 receptor##L23503|GLP1R|2740|glucagon-like peptide 1 receptor##U01156|GLP1R|2740|glucagon-like peptide 1 receptor##U01157|GLP1R|2740|glucagon-like peptide 1 receptor##AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5##AF358910|KCNK17|89822|potassium channel, subfamily K, member 17##DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17##DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17##EU978944|KCNK17|89822|potassium channel, subfamily K, member 17##BC025726|KCNK17|89822|potassium channel, subfamily K, member 17##AY358853|KCNK17|89822|potassium channel, subfamily K, member 17##AF339912|KCNK17|89822|potassium channel, subfamily K, member 17##AK310582|KCNK17|89822|potassium channel, subfamily K, member 17##AK315273|KCNK17|89822|potassium channel, subfamily K, member 17##NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17##NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17##AF358909|KCNK16|83795|potassium channel, subfamily K, member 16##AY253145|KCNK16|83795|potassium channel, subfamily K, member 16##AY253146|KCNK16|83795|potassium channel, subfamily K, member 16##AY253147|KCNK16|83795|potassium channel, subfamily K, member 16##BC111860|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135105|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135106|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135107|KCNK16|83795|potassium channel, subfamily K, member 16##NM_032115|KCNK16|83795|potassium channel, subfamily K, member 16##EU978943|KCNK16|83795|potassium channel, subfamily K, member 16	0.99958	CTCF.p2:-11:1.000
chr6	43231332	43231449	reg1000548.p1	17.306	+	NM_032538 TSC_hg19_v1_chr6_+_43211227	-20162	+	TSC_hg19_v1_chr6_-_43197220 BC011683 AF040105 NM_006443 NM_199184 EU585603	-34191	-	TSC_hg19_v1_chr6_+_43149926 BC028159	-81453	+	TSC_hg19_v1_chr6_+_43265994 NM_006672 NM_153320 AF097518	34607	+	TSC_hg19_v1_chr6_+_43266009 AK290806 AK309570 AK314822 BC033805 AK290796 BC017963 DQ893614 DQ896844 AF210455 AY050498	34662	+	AB463553 AY555741 AY555742 AY555743 AY555744 NM_206922	45139	-	NM_032538|TTBK1|84630|tau tubulin kinase 1##BC011683|C6orf108|10591|chromosome 6 open reading frame 108##AF040105|C6orf108|10591|chromosome 6 open reading frame 108##NM_006443|C6orf108|10591|chromosome 6 open reading frame 108##NM_199184|C6orf108|10591|chromosome 6 open reading frame 108##EU585603|C6orf108|10591|chromosome 6 open reading frame 108##BC028159|CUL9|23113|cullin 9##NM_006672|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_153320|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF097518|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290806|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK309570|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK314822|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC033805|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290796|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC017963|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ893614|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ896844|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF210455|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AY050498|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AY555741|CRIP3|401262|cysteine-rich protein 3##AY555742|CRIP3|401262|cysteine-rich protein 3##AY555743|CRIP3|401262|cysteine-rich protein 3##AY555744|CRIP3|401262|cysteine-rich protein 3##NM_206922|CRIP3|401262|cysteine-rich protein 3	0.317955	CTCF.p2:-4:0.318
chr1	16408945	16409067	reg1001027.p1	17.305	+	AB463624 CU691488 AK094085 BC037394 TSC_hg19_v1_chr1_-_16400144 BC016848 NM_182623	-8949	-	AK098217 NM_001165945	-33723	+	NM_000085 AK292335 BC020873 BC033806 Z30644	-38708	+	EU826606 DQ895231 EU176326 TSC_hg19_v1_chr1_-_16482565 M59371 BC037166 AK296788 NM_004431	73520	-	BC040640 NM_153213 AK091281 AX746893 AK297707	130128	-	NM_030907	154652	-	AK094085|FAM131C|348487|family with sequence similarity 131, member C##BC037394|FAM131C|348487|family with sequence similarity 131, member C##BC016848|FAM131C|348487|family with sequence similarity 131, member C##NM_182623|FAM131C|348487|family with sequence similarity 131, member C##AK098217|CLCNKB|1188|chloride channel Kb##NM_001165945|CLCNKB|1188|chloride channel Kb##NM_000085|CLCNKB|1188|chloride channel Kb##AK292335|CLCNKB|1188|chloride channel Kb##BC020873|CLCNKB|1188|chloride channel Kb##BC033806|CLCNKB|1188|chloride channel Kb##Z30644|CLCNKB|1188|chloride channel Kb##EU826606|EPHA2|1969|EPH receptor A2##DQ895231|EPHA2|1969|EPH receptor A2##EU176326|EPHA2|1969|EPH receptor A2##M59371|EPHA2|1969|EPH receptor A2##BC037166|EPHA2|1969|EPH receptor A2##AK296788|EPHA2|1969|EPH receptor A2##NM_004431|EPHA2|1969|EPH receptor A2##BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##NM_030907|RSG1|79363|REM2 and RAB-like small GTPase 1	0.999776	CTCF.p2:2:1.000
chr16	21566237	21566376	reg1000610.p1	17.302	+	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	-34554	-	BC036263 NM_130464	-129649	-	BX648477 NM_001014444 NM_001888	-251919	-	TSC_hg19_v1_chr16_+_21610912 NM_001077180 NM_016025 AJ278577 AJ278578 AK074529 BC000195 AK313077 AK075022 AK075237	44584	+	AF151839 TSC_hg19_v1_chr16_+_21611174	44848	+	TSC_hg19_v1_chr16_-_21663930 DQ892013 DQ895202 EU176227 EU176324 AK313860 AK223286 AK290910 AK293703 BC017844	97614	-	BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BX648477|CRYM|1428|crystallin, mu##NM_001014444|CRYM|1428|crystallin, mu##NM_001888|CRYM|1428|crystallin, mu##NM_001077180|METTL9|51108|methyltransferase like 9##NM_016025|METTL9|51108|methyltransferase like 9##AJ278577|METTL9|51108|methyltransferase like 9##AJ278578|METTL9|51108|methyltransferase like 9##AK074529|METTL9|51108|methyltransferase like 9##BC000195|METTL9|51108|methyltransferase like 9##AK313077|METTL9|51108|methyltransferase like 9##AK075022|METTL9|51108|methyltransferase like 9##AK075237|METTL9|51108|methyltransferase like 9##AF151839|METTL9|51108|methyltransferase like 9##DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6##DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6##EU176227|IGSF6|10261|immunoglobulin superfamily, member 6##EU176324|IGSF6|10261|immunoglobulin superfamily, member 6##AK313860|IGSF6|10261|immunoglobulin superfamily, member 6##AK223286|IGSF6|10261|immunoglobulin superfamily, member 6##AK290910|IGSF6|10261|immunoglobulin superfamily, member 6##AK293703|IGSF6|10261|immunoglobulin superfamily, member 6##BC017844|IGSF6|10261|immunoglobulin superfamily, member 6	0.963104	CTCF.p2:23:0.963
chr3	183613149	183613271	reg1000498.p1	17.302	+	TSC_hg19_v1_chr3_-_183602690 NM_001037639 NM_018622	-10502	-	TSC_hg19_v1_chr3_-_183602669 BC003653	-10532	-	TSC_hg19_v1_chr3_-_183602663 AK024765	-10548	-	TSC_hg19_v1_chr3_-_183735673 BC142670 BC142719 U83661 AF104942 AY754874 AY754875 AY754876 AB209454 BC051358 NM_001023587 NM_005688	122481	-	AY159812 NM_182537	136121	+	NM_001145143	136319	+	NM_001037639|PARL|55486|presenilin associated, rhomboid-like##NM_018622|PARL|55486|presenilin associated, rhomboid-like##BC003653|PARL|55486|presenilin associated, rhomboid-like##AK024765|PARL|55486|presenilin associated, rhomboid-like##BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY159812|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D##NM_182537|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D##NM_001145143|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D	0.775869	CTCF.p2:-4:0.776
chr14	24527609	24527747	reg1001042.p1	17.296	+	TSC_hg19_v1_chr14_+_24521201 NM_138360	-6502	+	GQ871923 GQ871922 BC171914 BC171918 GQ871926 NM_001082488	-22014	+	NM_198083 BC101814 BC101812 AK301373 BC000663 BC006125	-69606	+	AK314182 BC018046 AB009288 NM_006032 TSC_hg19_v1_chr14_+_24540770 AK294460 AK222675 AL137688	13091	+	M95925 M81840 NM_006177 BC012395 AB593104 AB593106 AB593102	26152	-	TSC_hg19_v1_chr14_+_24563519 NM_001018073 NM_004563 AK311710 AK316206 AK129934 AK307913 X92720 BC001454 BX248272 CU674712 CR456913	35813	+	NM_138360|LRRC16B|90668|leucine rich repeat containing 16B##GQ871923|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##GQ871922|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##BC171914|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##BC171918|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##NM_001082488|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##NM_198083|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC101814|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC101812|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AK301373|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC000663|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC006125|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AK314182|CPNE6|9362|copine VI (neuronal)##BC018046|CPNE6|9362|copine VI (neuronal)##AB009288|CPNE6|9362|copine VI (neuronal)##NM_006032|CPNE6|9362|copine VI (neuronal)##AK294460|CPNE6|9362|copine VI (neuronal)##AK222675|CPNE6|9362|copine VI (neuronal)##AL137688|CPNE6|9362|copine VI (neuronal)##M95925|NRL|4901|neural retina leucine zipper##M81840|NRL|4901|neural retina leucine zipper##NM_006177|NRL|4901|neural retina leucine zipper##BC012395|NRL|4901|neural retina leucine zipper##AB593104|NRL|4901|neural retina leucine zipper##AB593106|NRL|4901|neural retina leucine zipper##AB593102|NRL|4901|neural retina leucine zipper##NM_001018073|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##NM_004563|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK311710|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK316206|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK129934|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK307913|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##X92720|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##BC001454|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##BX248272|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##CR456913|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)	0.999044	CTCF.p2:-9:0.999
chr1	199212693	199212839	reg1000933.p1	17.289	+	TSC_hg19_v1_chr1_-_198906559 EF413001	-306219	-	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-604436	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-604541	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	784103	+	AK316513 TSC_hg19_v1_chr1_+_200011716	798958	+	NM_001105517	969889	+	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene	0.923368	CTCF.p2:6:0.864
chr12	57381424	57381547	reg1000849.p1	17.287	+	AF057034 NM_003708	-30086	-	AY044434 BC101551 BC101553 AK122782 NM_148897	-53369	-	AK313423 BC020710 NM_003725 TSC_hg19_v1_chr12_+_57157107 U89281 AF223225	-224374	+	BC034761 NM_007264 Y13583	6806	+	BC140890 BC146867 AB002350 BC152461 TSC_hg19_v1_chr12_-_57400241 AK292468 NM_014830	18766	-	AF216586 AF186112 AX810719 AF136174 AX810703 AF537113 AF537114 AF537115 AF537116 AF537117 AF537118 AF537119 AF537120 AF537121 AY358679 BC032145 NM_001178054 NM_013251	28824	-	AF057034|RDH16|8608|retinol dehydrogenase 16 (all-trans)##NM_003708|RDH16|8608|retinol dehydrogenase 16 (all-trans)##AY044434|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC101551|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC101553|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##AK122782|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##NM_148897|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##AK313423|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##BC020710|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##NM_003725|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##U89281|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##AF223225|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##BC034761|GPR182|11318|G protein-coupled receptor 182##NM_007264|GPR182|11318|G protein-coupled receptor 182##Y13583|GPR182|11318|G protein-coupled receptor 182##BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39##BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39##AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39##BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39##AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39##NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39##AF216586|TAC3|6866|tachykinin 3##AF186112|TAC3|6866|tachykinin 3##AF537113|TAC3|6866|tachykinin 3##AF537114|TAC3|6866|tachykinin 3##AF537115|TAC3|6866|tachykinin 3##AF537116|TAC3|6866|tachykinin 3##AF537117|TAC3|6866|tachykinin 3##AF537118|TAC3|6866|tachykinin 3##AF537119|TAC3|6866|tachykinin 3##AF537120|TAC3|6866|tachykinin 3##AF537121|TAC3|6866|tachykinin 3##AY358679|TAC3|6866|tachykinin 3##BC032145|TAC3|6866|tachykinin 3##NM_001178054|TAC3|6866|tachykinin 3##NM_013251|TAC3|6866|tachykinin 3	0.988692	CTCF.p2:9:0.989
chr1	149204388	149204508	reg1000991.p1	17.284	+	NM_001164261 NM_001164262	-398434	+	NM_001102663 AK290302 AY894562 AY894566	-464947	+	NM_001144032	-560438	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	194748	-	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	348575	+	X14355 AK311303 NM_000566 X14356 AK291451 BC032634 AB527585 BC152383 CU689454 DQ890842 DQ893997 L03418	549824	+	NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001144032|PPIAL4E|730262|peptidylprolyl isomerase A (cyclophilin A)-like 4E##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##X14355|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##NM_000566|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##X14356|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK291451|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC032634|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC152383|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ890842|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ893997|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##L03418|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)	0.751704	CTCF.p2:2:0.752
chr3	73150337	73150484	reg1000603.p1	17.283	+	BC051316 BC064501 NM_018029	-39601	+	TSC_hg19_v1_chr3_+_73046081 AF327345 NM_174907 BC128136 BC128137	-104290	+	TSC_hg19_v1_chr3_+_73045984 BC110889	-104419	+	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	523628	-	AB384611 BC150608 NM_020872	1419892	-	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	2333739	-	BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene	0.973015	CTCF.p2:-4:0.973
chr11	129620853	129620964	reg1000677.p1	17.280	+	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	-375027	+	EF127492 NM_001142685	-558816	-	AB018255 AY194287 TSC_hg19_v1_chr11_-_128894084 AB079856 NM_014715	-726847	-	TSC_hg19_v1_chr11_+_129685744 AK098106 NM_138788 AK290283 AK292058	64836	+	NM_006165 X80878	141995	-	TSC_hg19_v1_chr11_-_129765453 BC063280	144534	-	AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2##EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##AB018255|ARHGAP32|9743|Rho GTPase activating protein 32##AY194287|ARHGAP32|9743|Rho GTPase activating protein 32##AB079856|ARHGAP32|9743|Rho GTPase activating protein 32##NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32##AK098106|TMEM45B|120224|transmembrane protein 45B##NM_138788|TMEM45B|120224|transmembrane protein 45B##AK290283|TMEM45B|120224|transmembrane protein 45B##AK292058|TMEM45B|120224|transmembrane protein 45B##NM_006165|NFRKB|4798|nuclear factor related to kappaB binding protein##X80878|NFRKB|4798|nuclear factor related to kappaB binding protein##BC063280|NFRKB|4798|nuclear factor related to kappaB binding protein	1.765519	CTCF.p2:-23:0.998	CTCF.p2:29:0.768
chr15	45329378	45329489	reg1000596.p1	17.280	+	NM_003104 TSC_hg19_v1_chr15_+_45315395 AK312444 U07361 L29008 BC021085 AK295656 AK296574 AK309672 BC025295 AB529056 DQ892769 DQ896016	-14043	+	BC029537 NM_152448 DQ890983 DQ894158	-80525	+	NM_080745 NM_182985	-300874	+	TSC_hg19_v1_chr15_-_45406336 AF230496	76898	-	TSC_hg19_v1_chr15_-_45406363 AF267981 NM_014080	76930	-	TSC_hg19_v1_chr15_+_45406523 NM_207581 AK303955 BC137465 BX537581 DQ489734	77161	+	NM_003104|SORD|6652|sorbitol dehydrogenase##AK312444|SORD|6652|sorbitol dehydrogenase##U07361|SORD|6652|sorbitol dehydrogenase##L29008|SORD|6652|sorbitol dehydrogenase##BC021085|SORD|6652|sorbitol dehydrogenase##AK296574|SORD|6652|sorbitol dehydrogenase##AK309672|SORD|6652|sorbitol dehydrogenase##BC025295|SORD|6652|sorbitol dehydrogenase##DQ892769|SORD|6652|sorbitol dehydrogenase##DQ896016|SORD|6652|sorbitol dehydrogenase##BC029537|C15orf43|145645|chromosome 15 open reading frame 43##NM_152448|C15orf43|145645|chromosome 15 open reading frame 43##DQ890983|C15orf43|145645|chromosome 15 open reading frame 43##DQ894158|C15orf43|145645|chromosome 15 open reading frame 43##NM_080745|TRIM69|140691|tripartite motif containing 69##NM_182985|TRIM69|140691|tripartite motif containing 69##AF230496|DUOX2|50506|dual oxidase 2##AF267981|DUOX2|50506|dual oxidase 2##NM_014080|DUOX2|50506|dual oxidase 2##NM_207581|DUOXA2|405753|dual oxidase maturation factor 2##AK303955|DUOXA2|405753|dual oxidase maturation factor 2##BC137465|DUOXA2|405753|dual oxidase maturation factor 2##BX537581|DUOXA2|405753|dual oxidase maturation factor 2##DQ489734|DUOXA2|405753|dual oxidase maturation factor 2	0.263008	CTCF.p2:17:0.263
chr9	114837145	114837266	reg1000602.p2	17.280	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-177738	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-178091	+	AL833535 NM_173521	-291430	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	100315	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	258082	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	258644	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.713402	CTCF.p2:9:0.713
chr12	108278970	108279105	reg1000992.p1	17.277	+	AY238895 NM_203436	-110876	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-124036	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	-124127	-	BC110330 AB018332 NM_014653	244450	+	NM_001142345	435401	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	454047	-	AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1	0.992418	CTCF.p2:11:0.992
chr12	12529705	12529846	reg1001043.p1	17.277	+	TSC_hg19_v1_chr12_+_12510051 NM_058169 AK075028 BC013668 AY037865 AY037866 DQ891778 DQ894962 CU680646	-19610	+	AY358563 TSC_hg19_v1_chr12_-_12503210 AK023622 NM_018050 AK001160 BC032998	-26603	-	BC117136 BC126405 BC143725 AF074264 NM_002336 TSC_hg19_v1_chr12_-_12419947	-109933	-	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	185625	-	TSC_hg19_v1_chr12_+_12764831 BC106052 AF039081 NM_001310 AK307202	235020	+	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	235108	+	NM_058169|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AK075028|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##BC013668|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037865|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037866|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ891778|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ894962|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY358563|MANSC1|54682|MANSC domain containing 1##AK023622|MANSC1|54682|MANSC domain containing 1##NM_018050|MANSC1|54682|MANSC domain containing 1##AK001160|MANSC1|54682|MANSC domain containing 1##BC032998|MANSC1|54682|MANSC domain containing 1##BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6##BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6##BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6##AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6##NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6##AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16##BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2##AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2##AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2##BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2	0.989316	CTCF.p2:-24:0.989
chr5	151038626	151038743	reg1000570.p1	17.277	+	AF231022 NM_001447	-90180	-	TSC_hg19_v1_chr5_+_150827239 AY162213 BC136437 BC136438	-211440	+	AK309323 TSC_hg19_v1_chr5_+_150827187	-211495	+	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	27777	-	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	27824	-	TSC_hg19_v1_chr5_-_151138170 AK091843 AX747215 NM_004045 AK293063 BC112248 BC112250	99531	-	AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##AY162213|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136437|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136438|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AK309323|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK091843|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##NM_004045|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AK293063|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112248|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112250|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)	0.855824	CTCF.p2:-8:0.856
chr4	38677279	38677408	reg1000416.p3	17.270	+	AF289565 TSC_hg19_v1_chr4_-_38666549	-10854	-	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	-11517	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-698326	+	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	107256	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	129076	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	181085	-	AF289565|FLJ13197|79667|uncharacterized FLJ13197##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6	0.969047	CTCF.p2:-2:0.969
chr15	66911606	66911724	reg1001039.p1	17.269	+	TSC_hg19_v1_chr15_+_66874506 BC016970	-37149	+	AB527178 AY358729 NM_207338	-53896	-	AK122787 TSC_hg19_v1_chr15_+_66797663 AK291048 BC090041 BC036900	-114007	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	83009	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	83894	+	NM_001142861 U59914	89264	+	AY358729|LCTL|197021|lactase-like##NM_207338|LCTL|197021|lactase-like##AK122787|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AK291048|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC090041|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC036900|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6	0.987719	CTCF.p2:-5:0.988
chr6	6677162	6677310	reg1000621.p1	17.262	+	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	-88286	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-356326	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-356351	-	BC039678 TSC_hg19_v1_chr6_+_6725205	47925	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	430590	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	430799	+	NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1	0.99193	CTCF.p2:-1:0.992
chr8	8923373	8923494	reg1000541.p1	17.261	+	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	-62928	+	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	-63068	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	-172495	-	TSC_hg19_v1_chr8_-_9008167 BC043388 AK024067 NM_024607	84745	-	TSC_hg19_v1_chr8_-_9009055 AK096119 NM_001201329	85667	-	TSC_hg19_v1_chr8_+_9413421 BC098394	489972	+	AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##BC043388|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK024067|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_024607|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK096119|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_001201329|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##BC098394|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	0.999433	CTCF.p2:-20:0.999
chr1	16321143	16321268	reg1000729.p1	17.258	+	TSC_hg19_v1_chr1_-_16302597 BC126163 BC143965 BC143968 Y09723 AK302610 AK301896 AK309081 AK311083 AK315201 AK303823 AK299820 AK223618 AK294796 NM_001242884 NM_003443	-18735	-	TSC_hg19_v1_chr1_+_16259065 BC172907	-62094	+	AF356524 NM_015001 TSC_hg19_v1_chr1_+_16174380	-146826	+	AK127425 BC017946 NM_178840 CU676116	9558	+	TSC_hg19_v1_chr1_-_16344539 DQ892716 DQ895966 EU176383 EU831930 EU832025 AL832181 AF155908 AJ243191 CR749298 BX537990 AK075151 AK095911 CR749419	23308	-	AK057295 NM_014424	24079	-	BC126163|ZBTB17|7709|zinc finger and BTB domain containing 17##BC143965|ZBTB17|7709|zinc finger and BTB domain containing 17##BC143968|ZBTB17|7709|zinc finger and BTB domain containing 17##Y09723|ZBTB17|7709|zinc finger and BTB domain containing 17##AK302610|ZBTB17|7709|zinc finger and BTB domain containing 17##AK301896|ZBTB17|7709|zinc finger and BTB domain containing 17##AK309081|ZBTB17|7709|zinc finger and BTB domain containing 17##AK311083|ZBTB17|7709|zinc finger and BTB domain containing 17##AK315201|ZBTB17|7709|zinc finger and BTB domain containing 17##AK303823|ZBTB17|7709|zinc finger and BTB domain containing 17##AK299820|ZBTB17|7709|zinc finger and BTB domain containing 17##AK223618|ZBTB17|7709|zinc finger and BTB domain containing 17##AK294796|ZBTB17|7709|zinc finger and BTB domain containing 17##NM_001242884|ZBTB17|7709|zinc finger and BTB domain containing 17##NM_003443|ZBTB17|7709|zinc finger and BTB domain containing 17##AF356524|SPEN|23013|spen homolog, transcriptional regulator (Drosophila)##NM_015001|SPEN|23013|spen homolog, transcriptional regulator (Drosophila)##AK127425|C1orf64|149563|chromosome 1 open reading frame 64##BC017946|C1orf64|149563|chromosome 1 open reading frame 64##NM_178840|C1orf64|149563|chromosome 1 open reading frame 64##DQ892716|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##DQ895966|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU176383|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU831930|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU832025|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AL832181|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AF155908|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AJ243191|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##CR749298|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##BX537990|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK075151|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK095911|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##CR749419|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK057295|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##NM_014424|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)	0.219987	
chr22	18312870	18313006	reg1000976.p1	17.256	+	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-55604	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-55715	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	-55731	-	TSC_hg19_v1_chr22_-_18484268 AK127487	171290	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	194323	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	247750	+	BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26	0.884219	CTCF.p2:-9:0.884
chr1	16359433	16359554	reg1000814.p1	17.254	+	BC053869 NM_001042704 NM_004070 AK298285 AK225550 AK290814 S80315	-11040	+	AK057295 NM_014424	-14209	-	TSC_hg19_v1_chr1_-_16344539 DQ892716 DQ895966 EU176383 EU831930 EU832025 AL832181 AF155908 AJ243191 CR749298 BX537990 AK075151 AK095911 CR749419	-14980	-	NM_000085 AK292335 BC020873 BC033806 Z30644	10805	+	AK098217 NM_001165945	15790	+	AB463624 CU691488 AK094085 BC037394 TSC_hg19_v1_chr1_-_16400144 BC016848 NM_182623	40564	-	BC053869|CLCNKA|1187|chloride channel Ka##NM_001042704|CLCNKA|1187|chloride channel Ka##NM_004070|CLCNKA|1187|chloride channel Ka##AK298285|CLCNKA|1187|chloride channel Ka##AK225550|CLCNKA|1187|chloride channel Ka##AK290814|CLCNKA|1187|chloride channel Ka##S80315|CLCNKB|1188|chloride channel Kb##AK057295|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##NM_014424|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##DQ892716|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##DQ895966|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU176383|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU831930|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU832025|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AL832181|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AF155908|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AJ243191|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##CR749298|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##BX537990|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK075151|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK095911|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##CR749419|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##NM_000085|CLCNKB|1188|chloride channel Kb##AK292335|CLCNKB|1188|chloride channel Kb##BC020873|CLCNKB|1188|chloride channel Kb##BC033806|CLCNKB|1188|chloride channel Kb##Z30644|CLCNKB|1188|chloride channel Kb##AK098217|CLCNKB|1188|chloride channel Kb##NM_001165945|CLCNKB|1188|chloride channel Kb##AK094085|FAM131C|348487|family with sequence similarity 131, member C##BC037394|FAM131C|348487|family with sequence similarity 131, member C##BC016848|FAM131C|348487|family with sequence similarity 131, member C##NM_182623|FAM131C|348487|family with sequence similarity 131, member C	0.026866	
chr22	43263860	43263980	reg1000716.p1	17.251	+	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-10565	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	-10650	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	-10709	-	BC008037 NM_007229	79126	-	AL136845 NM_001184971	91966	-	TSC_hg19_v1_chr22_-_43411136 AF128536	147219	-	NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	1.07304	CTCF.p2:28:0.876
chr12	53374754	53374878	reg1000653.p1	17.250	+	AK290938 AK315826 TSC_hg19_v1_chr12_-_53343647	-31187	-	AK313988 TSC_hg19_v1_chr12_+_53342904 AK223093 AK129587 BC020982 X12881 BC072017 BC000698 BC000180 BC073757 BC008636 BC004253 AY762101 AB528484 DQ890555 DQ893715 BT019412 X12883	-31879	+	NM_000224 TSC_hg19_v1_chr12_+_53342874	-31955	+	NM_001417 TSC_hg19_v1_chr12_+_53400220	25326	+	TSC_hg19_v1_chr12_+_53400239 AK222528 AK293731 AK299329 AK310244 AK299510 AK299526	25422	+	TSC_hg19_v1_chr12_+_53400249 BC073139 BC073154 BC098437 BC007745 CR627377	25441	+	AK290938|KRT8|3856|keratin 8##AK315826|KRT8|3856|keratin 8##AK313988|KRT18|3875|keratin 18##AK223093|KRT18|3875|keratin 18##AK129587|KRT18|3875|keratin 18##BC020982|KRT18|3875|keratin 18##X12881|KRT18|3875|keratin 18##BC072017|KRT18|3875|keratin 18##BC000698|KRT18|3875|keratin 18##BC000180|KRT18|3875|keratin 18##BC008636|KRT18|3875|keratin 18##BC004253|KRT18|3875|keratin 18##AY762101|KRT18|3875|keratin 18##DQ890555|KRT18|3875|keratin 18##DQ893715|KRT18|3875|keratin 18##BT019412|KRT18|3875|keratin 18##X12883|KRT18|3875|keratin 18##NM_000224|KRT18|3875|keratin 18##NM_001417|EIF4B|1975|eukaryotic translation initiation factor 4B##AK222528|EIF4B|1975|eukaryotic translation initiation factor 4B##AK293731|EIF4B|1975|eukaryotic translation initiation factor 4B##AK299329|EIF4B|1975|eukaryotic translation initiation factor 4B##AK310244|EIF4B|1975|eukaryotic translation initiation factor 4B##AK299510|EIF4B|1975|eukaryotic translation initiation factor 4B##AK299526|EIF4B|1975|eukaryotic translation initiation factor 4B##BC073139|EIF4B|1975|eukaryotic translation initiation factor 4B##BC073154|EIF4B|1975|eukaryotic translation initiation factor 4B##BC098437|EIF4B|1975|eukaryotic translation initiation factor 4B##BC007745|EIF4B|1975|eukaryotic translation initiation factor 4B##CR627377|EIF4B|1975|eukaryotic translation initiation factor 4B	1.087375	CTCF.p2:-32:0.999
chr9	5886235	5886383	reg1000905.p1	17.249	+	TSC_hg19_v1_chr9_-_5833082 NM_024896	-53231	-	TSC_hg19_v1_chr9_-_5833067 AK127218	-53242	-	AL834191 AB058718 TSC_hg19_v1_chr9_-_5833045 BC136771 BC136773 BC144404	-53358	-	U06654 BC014423 AK312149 NM_005511 U06452	4545	+	BC108654 TSC_hg19_v1_chr9_-_5968443	82099	-	TSC_hg19_v1_chr9_-_6007953 NM_001017969	121655	-	NM_024896|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AK127218|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AL834191|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AB058718|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136771|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136773|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC144404|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##U06654|MLANA|2315|melan-A##BC014423|MLANA|2315|melan-A##AK312149|MLANA|2315|melan-A##NM_005511|MLANA|2315|melan-A##U06452|MLANA|2315|melan-A##NM_001017969|KIAA2026|158358|KIAA2026	0.996922	CTCF.p2:-20:0.997
chr1	27627412	27627537	reg1000925.p1	17.247	+	TSC_hg19_v1_chr1_+_27561153 BC032523	-66312	+	TSC_hg19_v1_chr1_+_27561124 AK315564	-66347	+	NM_015023 TSC_hg19_v1_chr1_+_27561056	-66440	+	TSC_hg19_v1_chr1_+_27648669 NM_032125 AK313110 AK303821	21177	+	AL136683 BC011579 BC090039 TSC_hg19_v1_chr1_+_27648745	21259	+	TSC_hg19_v1_chr1_+_27648756 EU831420 EU831513 AF251699 AK222642 AK307077 BX648289	21342	+	BC032523|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##NM_032125|TMEM222|84065|transmembrane protein 222##AK313110|TMEM222|84065|transmembrane protein 222##AK303821|TMEM222|84065|transmembrane protein 222##AL136683|TMEM222|84065|transmembrane protein 222##BC011579|TMEM222|84065|transmembrane protein 222##BC090039|TMEM222|84065|transmembrane protein 222##EU831420|TMEM222|84065|transmembrane protein 222##EU831513|TMEM222|84065|transmembrane protein 222##AF251699|TMEM222|84065|transmembrane protein 222##AK222642|TMEM222|84065|transmembrane protein 222##AK307077|TMEM222|84065|transmembrane protein 222##BX648289|LOC644961|644961|actin, beta pseudogene	1.017669	CTCF.p2:-7:0.999
chr5	176001162	176001275	reg1001008.p1	17.247	+	NM_017675	-24876	+	AK315055 NM_001171976	-31707	+	TSC_hg19_v1_chr5_-_175964932 AK302385	-36294	-	TSC_hg19_v1_chr5_-_176037158 BC052950 NM_052899 AB067480	35919	-	S69965 BC002902 TSC_hg19_v1_chr5_-_176057536 JF960950 JF960951 JF960952 JF960953 NM_001001502 NM_003085	56238	-	NM_001099408	56464	+	NM_017675|CDHR2|54825|cadherin-related family member 2##AK315055|CDHR2|54825|cadherin-related family member 2##NM_001171976|CDHR2|54825|cadherin-related family member 2##AK302385|RNF44|22838|ring finger protein 44##BC052950|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1##NM_052899|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1##AB067480|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1##S69965|SNCB|6620|synuclein, beta##BC002902|SNCB|6620|synuclein, beta##JF960950|SNCB|6620|synuclein, beta##JF960951|SNCB|6620|synuclein, beta##JF960952|SNCB|6620|synuclein, beta##JF960953|SNCB|6620|synuclein, beta##NM_001001502|SNCB|6620|synuclein, beta##NM_003085|SNCB|6620|synuclein, beta##NM_001099408|EIF4E1B|253314|eukaryotic translation initiation factor 4E family member 1B	0.999306	CTCF.p2:-4:0.999
chr12	112226085	112226204	reg1000605.p1	17.246	+	TSC_hg19_v1_chr12_+_112204765 AY621070 BC002967 X05409 AK223373 AK301375 Y00109 AK314856 BC071839 AB385105 CR456991 CU678320	-21396	+	NM_000690 NM_001204889 TSC_hg19_v1_chr12_+_112204694	-21452	+	AK092356 AK310923 AX747497 TSC_hg19_v1_chr12_+_112123871 AL832043 BC015056 AY323912 BC126358	-102238	+	TSC_hg19_v1_chr12_-_112279735 BC071748 BC007973 BC015633 BC032560 AK124158 BC107695	53588	-	AK122767 TSC_hg19_v1_chr12_+_112280039	53768	+	BC041049 TSC_hg19_v1_chr12_+_112280044	53929	+	AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##NM_000690|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##NM_001204889|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK092356|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AK310923|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AL832043|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC015056|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AY323912|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC126358|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC007973|C12orf47|51275|chromosome 12 open reading frame 47##BC015633|C12orf47|51275|chromosome 12 open reading frame 47##BC032560|C12orf47|51275|chromosome 12 open reading frame 47##AK122767|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##BC041049|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5	0.857707	CTCF.p2:19:0.858
chr14	69926954	69927089	reg1001012.p1	17.235	+	TSC_hg19_v1_chr14_+_69865419 BC047682	-61585	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	-61626	+	NM_001252151 NM_001252152 AK293222 AK316381 TSC_hg19_v1_chr14_+_69865137	-61903	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	24459	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	151289	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	151370	+	BC047682|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252151|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252152|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK293222|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK316381|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##D87434|KIAA0247|9766|KIAA0247	0.974722	CTCF.p2:2:0.975
chr19	33061249	33061366	reg1001150.p1	17.234	+	NM_207325 TSC_hg19_v1_chr19_+_32897021 AK126757 AF533710	-164250	+	TSC_hg19_v1_chr19_+_32896675 NM_001172774 AK129497 AF533711 BC029162	-164694	+	TSC_hg19_v1_chr19_-_32896476 BC000922	-164815	-	TSC_hg19_v1_chr19_+_33072095 NM_004708 AK293486 AB209040 BC015519 AF014955 DQ208400 AB590247 DQ893577 DQ894611 BT006694 CR456934	10820	+	BC050529 TSC_hg19_v1_chr19_-_33166076 AF447882 AL136784 AK054561 BC045605 NM_032139	104780	-	AK124499 NM_207391	105005	+	NM_207325|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AK126757|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AF533710|DPY19L3|147991|dpy-19-like 3 (C. elegans)##NM_001172774|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AK129497|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AF533711|DPY19L3|147991|dpy-19-like 3 (C. elegans)##BC029162|DPY19L3|147991|dpy-19-like 3 (C. elegans)##BC000922|LOC400684|400684|uncharacterized LOC400684##NM_004708|PDCD5|9141|programmed cell death 5##AK293486|PDCD5|9141|programmed cell death 5##AB209040|PDCD5|9141|programmed cell death 5##BC015519|PDCD5|9141|programmed cell death 5##AF014955|PDCD5|9141|programmed cell death 5##DQ208400|PDCD5|9141|programmed cell death 5##DQ893577|PDCD5|9141|programmed cell death 5##DQ894611|PDCD5|9141|programmed cell death 5##BT006694|PDCD5|9141|programmed cell death 5##CR456934|PDCD5|9141|programmed cell death 5##BC050529|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##AF447882|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##AL136784|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##AK054561|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##BC045605|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##NM_032139|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##AK124499|RGS9BP|388531|regulator of G protein signaling 9 binding protein##NM_207391|RGS9BP|388531|regulator of G protein signaling 9 binding protein	0.158114	
chr3	100181905	100182030	reg1000884.p1	17.232	+	BC052994 BC065555 NM_014820 AK302796	-61714	-	BC040562 NM_001085451	-61931	+	AB018262 BC003633 TSC_hg19_v1_chr3_-_100119948	-62039	-	TSC_hg19_v1_chr3_+_100211440 AK000996 AY450392 NM_018004	29486	+	TSC_hg19_v1_chr3_+_100211558 AK129789	29616	+	BC040355 TSC_hg19_v1_chr3_+_100238088	56108	+	BC052994|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##BC065555|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##NM_014820|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##AK302796|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##BC040562|LNP1|348801|leukemia NUP98 fusion partner 1##NM_001085451|LNP1|348801|leukemia NUP98 fusion partner 1##AB018262|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##BC003633|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##AK000996|TMEM45A|55076|transmembrane protein 45A##AY450392|TMEM45A|55076|transmembrane protein 45A##NM_018004|TMEM45A|55076|transmembrane protein 45A##AK129789|TMEM45A|55076|transmembrane protein 45A##BC040355|TMEM45A|55076|transmembrane protein 45A	0.465365	CTCF.p2:-10:0.465
chr7	137693665	137693802	reg1000794.p1	17.231	+	TSC_hg19_v1_chr7_-_137686833 NM_001253775 NM_194071	-6881	-	AK131517 TSC_hg19_v1_chr7_-_137686812	-6921	-	AK293048 BC110813 TSC_hg19_v1_chr7_-_137686800 BC063666 AJ549092 AJ549387	-6939	-	AK298421 NM_001190906 NM_001190907 NM_005989 Z28339 AK298428 BC130625 BC130627 AK289425 HQ258384	67485	+	TSC_hg19_v1_chr7_+_138145003 AK312610 AK075306 NM_003852 NM_015905 AK302679	451259	+	AF119042 BC028689 TSC_hg19_v1_chr7_+_138145183 AB528587 AF009353	451503	+	NM_001253775|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_194071|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK131517|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK293048|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC110813|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC063666|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549092|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549387|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK298421|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190906|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190907|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_005989|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##Z28339|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK298428|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130625|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130627|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK289425|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##HQ258384|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK312610|TRIM24|8805|tripartite motif containing 24##AK075306|TRIM24|8805|tripartite motif containing 24##NM_003852|TRIM24|8805|tripartite motif containing 24##NM_015905|TRIM24|8805|tripartite motif containing 24##AK302679|TRIM24|8805|tripartite motif containing 24##AF119042|TRIM24|8805|tripartite motif containing 24##BC028689|TRIM24|8805|tripartite motif containing 24##AF009353|TRIM24|8805|tripartite motif containing 24	0.980946	CTCF.p2:24:0.981
chr19	2391372	2391518	reg1001300.p1	17.228	+	AB109390 AB527446 AJ488946 AJ488947 NM_182973	-1670	+	TSC_hg19_v1_chr19_+_2328689 AJ345027 BC001788 BC028391	-62755	+	AB040965 AJ420897 TSC_hg19_v1_chr19_+_2328682 AY169315 AK308973	-62765	+	AF152352 DQ891755 DQ894937 TSC_hg19_v1_chr19_-_2427552 AK024764 AF144700 BC008607	36108	-	NM_012458 TSC_hg19_v1_chr19_-_2427893	36451	-	BT007441 EU832653 EU832731 TSC_hg19_v1_chr19_-_2456904	65445	-	AB109390|TMPRSS9|360200|transmembrane protease, serine 9##AJ488946|TMPRSS9|360200|transmembrane protease, serine 9##AJ488947|TMPRSS9|360200|transmembrane protease, serine 9##NM_182973|TMPRSS9|360200|transmembrane protease, serine 9##AJ345027|SPPL2B|56928|signal peptide peptidase-like 2B##BC001788|SPPL2B|56928|signal peptide peptidase-like 2B##BC028391|SPPL2B|56928|signal peptide peptidase-like 2B##AB040965|SPPL2B|56928|signal peptide peptidase-like 2B##AJ420897|SPPL2B|56928|signal peptide peptidase-like 2B##AY169315|SPPL2B|56928|signal peptide peptidase-like 2B##AF152352|TIMM13|26517|translocase of inner mitochondrial membrane 13 homolog (yeast)##DQ891755|TIMM13|26517|translocase of inner mitochondrial membrane 13 homolog (yeast)##DQ894937|TIMM13|26517|translocase of inner mitochondrial membrane 13 homolog (yeast)##AK024764|TIMM13|26517|translocase of inner mitochondrial membrane 13 homolog (yeast)##AF144700|TIMM13|26517|translocase of inner mitochondrial membrane 13 homolog (yeast)##BC008607|TIMM13|26517|translocase of inner mitochondrial membrane 13 homolog (yeast)##NM_012458|TIMM13|26517|translocase of inner mitochondrial membrane 13 homolog (yeast)##BT007441|LMNB2|84823|lamin B2##EU832653|LMNB2|84823|lamin B2##EU832731|LMNB2|84823|lamin B2	0.448616	CTCF.p2:4:0.449
chr2	10212818	10212937	reg1000827.p1	17.227	+	AB463821 TSC_hg19_v1_chr2_+_10186406	-26532	+	NM_001177718 AK302880 TSC_hg19_v1_chr2_+_10184414	-28468	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	-29085	+	AK091299 TSC_hg19_v1_chr2_-_10220297	7359	-	TSC_hg19_v1_chr2_-_10220367 AB590068 AF544983 NM_001037160	7552	-	NM_001165931 S40301 X59618 TSC_hg19_v1_chr2_+_10262805	49882	+	NM_001177718|KLF11|8462|Kruppel-like factor 11##AK302880|KLF11|8462|Kruppel-like factor 11##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11##AK091299|CYS1|192668|cystin 1##AF544983|CYS1|192668|cystin 1##NM_001037160|CYS1|192668|cystin 1##NM_001165931|RRM2|6241|ribonucleotide reductase M2##S40301|RRM2|6241|ribonucleotide reductase M2##X59618|RRM2|6241|ribonucleotide reductase M2	0.999707	CTCF.p2:5:1.000
chr7	36015586	36015720	reg1001126.p1	17.225	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	-174801	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	-174820	+	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	-174943	+	TSC_hg19_v1_chr7_+_36192789 NM_030636	177152	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	177230	+	TSC_hg19_v1_chr7_+_36193025 AB051493	177402	+	DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##NM_030636|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1	0.996691	CTCF.p2:12:0.997
chr2	232395183	232395306	reg1000622.p1	17.219	+	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	-90	-	BC033054 TSC_hg19_v1_chr2_-_232379076	-16162	-	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	-66009	-	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	62373	+	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	177990	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	178088	+	AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin##NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha	0.990548	CTCF.p2:-33:0.991
chr2	85647909	85648036	reg1000617.p2	17.218	+	TSC_hg19_v1_chr2_-_85641171 AK309290	-6806	-	TSC_hg19_v1_chr2_-_85641140 AK313898 AK300507	-6836	-	TSC_hg19_v1_chr2_-_85637490 AK225374 AK225378 NM_001747 AK130130	-10320	-	AF450483 NM_198482	13945	+	NM_005911	118128	+	TSC_hg19_v1_chr2_+_85766290 AK294208 AK293841 AK297758 AK297797 AK303877 AK308591 AK311142 AK311612	118316	+	AK309290|CAPG|822|capping protein (actin filament), gelsolin-like##AK313898|CAPG|822|capping protein (actin filament), gelsolin-like##AK300507|CAPG|822|capping protein (actin filament), gelsolin-like##AK225374|CAPG|822|capping protein (actin filament), gelsolin-like##AK225378|CAPG|822|capping protein (actin filament), gelsolin-like##NM_001747|CAPG|822|capping protein (actin filament), gelsolin-like##AK130130|CAPG|822|capping protein (actin filament), gelsolin-like##AF450483|SH2D6|284948|SH2 domain containing 6##NM_198482|SH2D6|284948|SH2 domain containing 6##NM_005911|MAT2A|4144|methionine adenosyltransferase II, alpha##AK293841|MAT2A|4144|methionine adenosyltransferase II, alpha##AK297758|MAT2A|4144|methionine adenosyltransferase II, alpha##AK297797|MAT2A|4144|methionine adenosyltransferase II, alpha##AK303877|MAT2A|4144|methionine adenosyltransferase II, alpha##AK308591|MAT2A|4144|methionine adenosyltransferase II, alpha	0.976575	CTCF.p2:-18:0.977
chr8	41559328	41559499	reg1000679.p2	17.218	+	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	-36650	-	AB587362 AK057898 NM_152568	-54538	-	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	-123719	+	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	95727	-	AK026601 TSC_hg19_v1_chr8_+_41685847	126412	+	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	194897	-	AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic	0.993259	CTCF.p2:-15:0.993
chr11	65183943	65184067	reg1000600.p1	17.216	+	TSC_hg19_v1_chr11_+_65154127 AK074850 BC033851 AK056778 BC044658 AK291678 AK304363 BC051695	-29894	+	NM_031904 TSC_hg19_v1_chr11_+_65154083 BC021094	-29941	+	BC036869 BX648573 NM_001077241 NM_182556	-33881	-	TSC_hg19_v1_chr11_+_65190268 EF177379 GQ859162	6264	+	TSC_hg19_v1_chr11_+_65190274 AK026198	6273	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	8395	+	AK074850|FRMD8|83786|FERM domain containing 8##BC033851|FRMD8|83786|FERM domain containing 8##AK056778|FRMD8|83786|FERM domain containing 8##BC044658|FRMD8|83786|FERM domain containing 8##AK291678|FRMD8|83786|FERM domain containing 8##AK304363|FRMD8|83786|FERM domain containing 8##BC051695|FRMD8|83786|FERM domain containing 8##NM_031904|FRMD8|83786|FERM domain containing 8##BC036869|SLC25A45|283130|solute carrier family 25, member 45##BX648573|SLC25A45|283130|solute carrier family 25, member 45##NM_001077241|SLC25A45|283130|solute carrier family 25, member 45##NM_182556|SLC25A45|283130|solute carrier family 25, member 45##EF177379|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)	1.53066	CTCF.p2:-3:0.998	CTCF.p2:-33:0.519
chr2	86054652	86054772	reg1000977.p1	17.212	+	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-73707	+	NM_006433 NM_012483 X54101 AK310057 AK311537 AK311012 AK311657 BC063245 AK304728 TSC_hg19_v1_chr2_+_85921514 DQ892267 DQ895468 BC023576 CR541859 X05044	-133232	+	NM_000542 NM_198843	-158849	-	AY152815 NM_001042437	40080	-	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	61374	-	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	278271	-	NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##NM_006433|GNLY|10578|granulysin##NM_012483|GNLY|10578|granulysin##X54101|GNLY|10578|granulysin##AK310057|GNLY|10578|granulysin##AK311537|GNLY|10578|granulysin##AK311012|GNLY|10578|granulysin##AK311657|GNLY|10578|granulysin##BC063245|GNLY|10578|granulysin##AK304728|GNLY|10578|granulysin##DQ892267|GNLY|10578|granulysin##DQ895468|GNLY|10578|granulysin##BC023576|GNLY|10578|granulysin##CR541859|GNLY|10578|granulysin##X05044|GNLY|10578|granulysin##NM_000542|SFTPB|6439|surfactant protein B##NM_198843|SFTPB|6439|surfactant protein B##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa	0.762855	CTCF.p2:-10:0.738
chr15	45145675	45145781	reg1000537.p1	17.208	+	NM_080745 NM_182985	-117169	+	BC031266 TSC_hg19_v1_chr15_+_45021331	-124397	+	AK311550 TSC_hg19_v1_chr15_+_45021275 DQ232883	-124475	+	BC029537 NM_152448 DQ890983 DQ894158	103180	+	NM_003104 TSC_hg19_v1_chr15_+_45315395 AK312444 U07361 L29008 BC021085 AK295656 AK296574 AK309672 BC025295 AB529056 DQ892769 DQ896016	169662	+	TSC_hg19_v1_chr15_-_45406336 AF230496	260603	-	NM_080745|TRIM69|140691|tripartite motif containing 69##NM_182985|TRIM69|140691|tripartite motif containing 69##BC031266|TRIM69|140691|tripartite motif containing 69##DQ232883|TRIM69|140691|tripartite motif containing 69##BC029537|C15orf43|145645|chromosome 15 open reading frame 43##NM_152448|C15orf43|145645|chromosome 15 open reading frame 43##DQ890983|C15orf43|145645|chromosome 15 open reading frame 43##DQ894158|C15orf43|145645|chromosome 15 open reading frame 43##NM_003104|SORD|6652|sorbitol dehydrogenase##AK312444|SORD|6652|sorbitol dehydrogenase##U07361|SORD|6652|sorbitol dehydrogenase##L29008|SORD|6652|sorbitol dehydrogenase##BC021085|SORD|6652|sorbitol dehydrogenase##AK296574|SORD|6652|sorbitol dehydrogenase##AK309672|SORD|6652|sorbitol dehydrogenase##BC025295|SORD|6652|sorbitol dehydrogenase##DQ892769|SORD|6652|sorbitol dehydrogenase##DQ896016|SORD|6652|sorbitol dehydrogenase##AF230496|DUOX2|50506|dual oxidase 2	0.810987	CTCF.p2:0:0.811
chr3	140911215	140911365	reg1000844.p1	17.203	+	AF403029 BC008324 NM_080862 AK056367	-140533	+	TSC_hg19_v1_chr3_+_140770412 BC051354	-140812	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	-250523	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	39396	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	131766	+	TSC_hg19_v1_chr3_+_141087345 AK311501	176067	+	AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38	1.95333	CTCF.p2:-24:0.998	CTCF.p2:63:0.955
chr11	111317391	111317520	reg1000969.p1	17.198	+	NM_006235	-67299	-	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	-67503	-	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	-147422	+	BC031045 NM_017589	65615	-	AK128145 NM_001100388 NM_207430 BC039505	68067	+	AK055539 NM_178834	93777	+	NM_006235|POU2AF1|5450|POU class 2 associating factor 1##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##BC031045|BTG4|54766|B-cell translocation gene 4##NM_017589|BTG4|54766|B-cell translocation gene 4##AK128145|C11orf88|399949|chromosome 11 open reading frame 88##NM_001100388|C11orf88|399949|chromosome 11 open reading frame 88##NM_207430|C11orf88|399949|chromosome 11 open reading frame 88##BC039505|C11orf88|399949|chromosome 11 open reading frame 88##AK055539|LAYN|143903|layilin##NM_178834|LAYN|143903|layilin	0.931743	CTCF.p2:13:0.932
chr11	12303500	12303622	reg1000644.p1	17.192	+	TSC_hg19_v1_chr11_+_12132122 BC044577 NM_014632 BC015755 AB018293	-171431	+	TSC_hg19_v1_chr11_-_12030884 AB057591 NM_013253	-272659	-	TSC_hg19_v1_chr11_-_12030877 AY358378	-272703	-	AK123671 NM_032867	4885	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	95548	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	392402	+	BC044577|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_014632|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##BC015755|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB018293|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB057591|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_013253|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AY358378|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)	0.998995	CTCF.p2:16:0.999
chr9	136658246	136658378	reg1000834.p1	17.187	+	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-53326	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-54834	-	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-156804	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	199134	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	274881	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	275314	-	BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3	0.952005	CTCF.p2:-15:0.952
chr17	19417339	19417475	reg1001031.p1	17.186	+	AK309372 NM_007148 AK313844 AK226052 BC038896 BC053989 AB026054 AB590107 EU446727	-102803	+	L38486 TSC_hg19_v1_chr17_-_19290504 BC047725 AK293056 AK304528 NM_001198695 NM_002404	-126906	-	TSC_hg19_v1_chr17_+_19282061 AY534741 AB527827 HQ257997	-135272	+	AK301854 TSC_hg19_v1_chr17_+_19437179 AK222625 AK001709 AK302620 NM_018242 BC022390 AK225360 BC010661 BC058882 BC050592 CU691318	19787	+	U46689 TSC_hg19_v1_chr17_+_19552087 NM_000382 NM_001031806 AK292381 L47162 AK025677 AK315096 BC002430 DQ895880 EU176377 CR457422 AB208894	134736	+	BC062614 AB250364 AB250701 BC035288 BC050578 AK055758 AK307647 NM_001099646 NM_152908	202553	-	AK309372|RNF112|7732|ring finger protein 112##NM_007148|RNF112|7732|ring finger protein 112##AK313844|RNF112|7732|ring finger protein 112##AK226052|RNF112|7732|ring finger protein 112##BC038896|RNF112|7732|ring finger protein 112##BC053989|RNF112|7732|ring finger protein 112##AB026054|RNF112|7732|ring finger protein 112##EU446727|RNF112|7732|ring finger protein 112##L38486|MFAP4|4239|microfibrillar-associated protein 4##BC047725|MFAP4|4239|microfibrillar-associated protein 4##AK293056|MFAP4|4239|microfibrillar-associated protein 4##AK304528|MFAP4|4239|microfibrillar-associated protein 4##NM_001198695|MFAP4|4239|microfibrillar-associated protein 4##NM_002404|MFAP4|4239|microfibrillar-associated protein 4##AY534741|MAPK7|5598|mitogen-activated protein kinase 7##HQ257997|MAPK7|5598|mitogen-activated protein kinase 7##AK301854|SLC47A1|55244|solute carrier family 47, member 1##AK222625|SLC47A1|55244|solute carrier family 47, member 1##AK001709|SLC47A1|55244|solute carrier family 47, member 1##AK302620|SLC47A1|55244|solute carrier family 47, member 1##NM_018242|SLC47A1|55244|solute carrier family 47, member 1##AK225360|SLC47A1|55244|solute carrier family 47, member 1##BC010661|SLC47A1|55244|solute carrier family 47, member 1##BC058882|SLC47A1|55244|solute carrier family 47, member 1##BC050592|SLC47A1|55244|solute carrier family 47, member 1##U46689|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_000382|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_001031806|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK292381|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##L47162|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK025677|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK315096|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC002430|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##DQ895880|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##EU176377|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##CR457422|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AB208894|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC062614|SLC47A2|146802|solute carrier family 47, member 2##AB250364|SLC47A2|146802|solute carrier family 47, member 2##AB250701|SLC47A2|146802|solute carrier family 47, member 2##BC035288|SLC47A2|146802|solute carrier family 47, member 2##BC050578|SLC47A2|146802|solute carrier family 47, member 2##AK055758|SLC47A2|146802|solute carrier family 47, member 2##AK307647|SLC47A2|146802|solute carrier family 47, member 2##NM_001099646|SLC47A2|146802|solute carrier family 47, member 2##NM_152908|SLC47A2|146802|solute carrier family 47, member 2	0.923006	CTCF.p2:-11:0.923
chr7	142912291	142912408	reg1000642.p2	17.182	+	BC100947 BC100948 BC114952 NM_176881	-31838	+	BC010950 AK312227 BC010951 NM_002652 Y10179 J03460	-83173	+	BC137044 NM_001001667	-162923	+	BC101795 BC101797 NM_176882	6801	+	TSC_hg19_v1_chr7_+_142960563 NM_001143679 NM_001143680 NM_001143681 NM_015917 AK295592 AL136938 AF087849 AY520571 AF070657 AK000640 BC001231 AK095263 AK289580	48195	+	AK289570 TSC_hg19_v1_chr7_+_142960593 BC063425 AM393732 BC050715 AK299968 AB528144 CR533445	48252	+	BC100947|TAS2R39|259285|taste receptor, type 2, member 39##BC100948|TAS2R39|259285|taste receptor, type 2, member 39##BC114952|TAS2R39|259285|taste receptor, type 2, member 39##NM_176881|TAS2R39|259285|taste receptor, type 2, member 39##BC010950|PIP|5304|prolactin-induced protein##AK312227|PIP|5304|prolactin-induced protein##BC010951|PIP|5304|prolactin-induced protein##NM_002652|PIP|5304|prolactin-induced protein##Y10179|PIP|5304|prolactin-induced protein##J03460|PIP|5304|prolactin-induced protein##BC137044|OR6V1|346517|olfactory receptor, family 6, subfamily V, member 1##NM_001001667|OR6V1|346517|olfactory receptor, family 6, subfamily V, member 1##BC101795|TAS2R40|259286|taste receptor, type 2, member 40##BC101797|TAS2R40|259286|taste receptor, type 2, member 40##NM_176882|TAS2R40|259286|taste receptor, type 2, member 40##NM_001143679|GSTK1|373156|glutathione S-transferase kappa 1##NM_001143680|GSTK1|373156|glutathione S-transferase kappa 1##NM_001143681|GSTK1|373156|glutathione S-transferase kappa 1##NM_015917|GSTK1|373156|glutathione S-transferase kappa 1##AK295592|GSTK1|373156|glutathione S-transferase kappa 1##AL136938|GSTK1|373156|glutathione S-transferase kappa 1##AF087849|GSTK1|373156|glutathione S-transferase kappa 1##AY520571|GSTK1|373156|glutathione S-transferase kappa 1##AF070657|GSTK1|373156|glutathione S-transferase kappa 1##AK000640|GSTK1|373156|glutathione S-transferase kappa 1##BC001231|GSTK1|373156|glutathione S-transferase kappa 1##AK095263|GSTK1|373156|glutathione S-transferase kappa 1##AK289580|GSTK1|373156|glutathione S-transferase kappa 1##AK289570|GSTK1|373156|glutathione S-transferase kappa 1##BC063425|GSTK1|373156|glutathione S-transferase kappa 1##AM393732|GSTK1|373156|glutathione S-transferase kappa 1##BC050715|GSTK1|373156|glutathione S-transferase kappa 1##AK299968|GSTK1|373156|glutathione S-transferase kappa 1##CR533445|GSTK1|373156|glutathione S-transferase kappa 1	0.9122	CTCF.p2:33:0.732
chr3	48477520	48477638	reg1000565.p1	17.179	+	TSC_hg19_v1_chr3_-_48471516 BC066773 NM_001130082 AK296776	-6082	-	TSC_hg19_v1_chr3_-_48471023 AB007867 BC146793 NM_002673	-6699	-	AY247969 NM_001159927 NM_001159929 NM_207102 BC101303 BC101304 BC101305 BC101306	-63843	+	BC011993 AK022498 NM_024661	3944	-	TSC_hg19_v1_chr3_+_48481685 BC066333 AF077202 BC080531 AY508979 AY794023 NM_015933 BC001102	4101	+	AK126594 TSC_hg19_v1_chr3_+_48481716 AF161448	4179	+	BC066773|PLXNB1|5364|plexin B1##NM_001130082|PLXNB1|5364|plexin B1##AK296776|PLXNB1|5364|plexin B1##AB007867|PLXNB1|5364|plexin B1##BC146793|PLXNB1|5364|plexin B1##NM_002673|PLXNB1|5364|plexin B1##AY247969|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12##NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12##BC101303|FBXW12|285231|F-box and WD repeat domain containing 12##BC101304|FBXW12|285231|F-box and WD repeat domain containing 12##BC101305|FBXW12|285231|F-box and WD repeat domain containing 12##BC101306|FBXW12|285231|F-box and WD repeat domain containing 12##BC011993|CCDC51|79714|coiled-coil domain containing 51##AK022498|CCDC51|79714|coiled-coil domain containing 51##NM_024661|CCDC51|79714|coiled-coil domain containing 51##BC066333|CCDC72|51372|coiled-coil domain containing 72##AF077202|CCDC72|51372|coiled-coil domain containing 72##BC080531|CCDC72|51372|coiled-coil domain containing 72##AY508979|CCDC72|51372|coiled-coil domain containing 72##AY794023|CCDC72|51372|coiled-coil domain containing 72##NM_015933|CCDC72|51372|coiled-coil domain containing 72##BC001102|CCDC72|51372|coiled-coil domain containing 72##AK126594|CCDC72|51372|coiled-coil domain containing 72##AF161448|CCDC72|51372|coiled-coil domain containing 72	1.76235	CTCF.p2:25:0.996	CTCF.p2:-34:0.767
chr15	41149979	41150098	reg1000876.p1	17.167	+	TSC_hg19_v1_chr15_+_41136676 NM_001032367 AK303899 BC004140 BT007425 CU676280 DQ890747 DQ892293 DQ895493	-13337	+	TSC_hg19_v1_chr15_+_41136245 AK314825 AK300195 NM_003710 NM_181642 BC018702 AY358969 AB000095 AY296715	-13688	+	AK000258 BC096716 BC098124 BC098150 BC098341 NM_001130143 NM_017726	-29133	-	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	16409	-	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	36662	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	71660	+	NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK000258|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC096716|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098124|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098150|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098341|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##NM_001130143|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##NM_017726|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)	0.95123	CTCF.p2:-10:0.951
chr10	125318965	125319098	reg1001037.p1	17.166	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-404675	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-405085	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-405133	+	AJ505757 NM_153442 BC112011 BC113462	106846	+	BC137492 BC146862 AY358565 NM_198148	332465	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	532868	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.738339	CTCF.p2:14:0.738
chr12	50469094	50469209	reg1000912.p1	17.163	+	NM_001095 NM_020039 U78180 U78181 BC028722 AK290010	-17590	+	BC024144 AB030251 TSC_hg19_v1_chr12_-_50419242 AK000733 AL136794 BC032754 AK315785 NM_001126103 NM_001126104 NM_013277	-49918	-	NM_001652 U48408	-102532	+	TSC_hg19_v1_chr12_+_50479018 NM_003076 NM_139071 U66617 BC009368	9836	+	TSC_hg19_v1_chr12_+_50479124 AK292700 AK293932 AK130517 AB527887 CU679327 EU447009 BC000063 AF109733	9962	+	AK130162 TSC_hg19_v1_chr12_+_50497790 BC032234 NM_005276 AK295911 L34041 AK312516 DQ890626 DQ893793 CU689308	28660	+	NM_001095|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##NM_020039|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78180|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78181|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##BC028722|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##AK290010|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##BC024144|RACGAP1|29127|Rac GTPase activating protein 1##AB030251|RACGAP1|29127|Rac GTPase activating protein 1##AK000733|RACGAP1|29127|Rac GTPase activating protein 1##AL136794|RACGAP1|29127|Rac GTPase activating protein 1##BC032754|RACGAP1|29127|Rac GTPase activating protein 1##AK315785|RACGAP1|29127|Rac GTPase activating protein 1##NM_001126103|RACGAP1|29127|Rac GTPase activating protein 1##NM_001126104|RACGAP1|29127|Rac GTPase activating protein 1##NM_013277|RACGAP1|29127|Rac GTPase activating protein 1##NM_001652|AQP6|363|aquaporin 6, kidney specific##U48408|AQP6|363|aquaporin 6, kidney specific##NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK130162|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##BC032234|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##NM_005276|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##AK295911|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##L34041|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##AK312516|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##DQ890626|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##DQ893793|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)	0.998801	CTCF.p2:-12:0.999
chr14	93418375	93418505	reg1001013.p1	17.162	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-28843	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	-28996	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-157754	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	163151	-	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	163774	-	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	232760	-	AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1	0.997814	CTCF.p2:-9:0.998
chrX	18409194	18409354	reg1001329.p3	17.160	+	Y18004 BC051913 TSC_hg19_v1_chrX_-_18372809 BC064617 AK303064 AK315116 BC040497 NM_006089	-36464	-	DQ892470 DQ895683 BC096745 BC037301 AK128155 NM_001184767 NM_153346	-170326	-	AK056214 AK298873 AK314631 NM_001172732 NM_001172739 NM_001172743 NM_021785	-529869	-	BC010966 TSC_hg19_v1_chrX_+_18443727 NM_003159 AK307444 AY217744 Y15057	34455	+	BC036091 NM_001037343	51069	+	AB464151 AF014459 DQ426892 NM_000330	280930	-	Y18004|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC051913|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC064617|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK303064|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK315116|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC040497|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##NM_006089|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##DQ892470|BEND2|139105|BEN domain containing 2##DQ895683|BEND2|139105|BEN domain containing 2##BC096745|BEND2|139105|BEN domain containing 2##BC037301|BEND2|139105|BEN domain containing 2##AK128155|BEND2|139105|BEN domain containing 2##NM_001184767|BEND2|139105|BEN domain containing 2##NM_153346|BEND2|139105|BEN domain containing 2##AK056214|RAI2|10742|retinoic acid induced 2##AK298873|RAI2|10742|retinoic acid induced 2##AK314631|RAI2|10742|retinoic acid induced 2##NM_001172732|RAI2|10742|retinoic acid induced 2##NM_001172739|RAI2|10742|retinoic acid induced 2##NM_001172743|RAI2|10742|retinoic acid induced 2##NM_021785|RAI2|10742|retinoic acid induced 2##BC010966|CDKL5|6792|cyclin-dependent kinase-like 5##NM_003159|CDKL5|6792|cyclin-dependent kinase-like 5##AK307444|CDKL5|6792|cyclin-dependent kinase-like 5##AY217744|CDKL5|6792|cyclin-dependent kinase-like 5##Y15057|CDKL5|6792|cyclin-dependent kinase-like 5##BC036091|CDKL5|6792|cyclin-dependent kinase-like 5##NM_001037343|CDKL5|6792|cyclin-dependent kinase-like 5##AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1	0.999396	CTCF.p2:-9:0.999
chr16	67051880	67052008	reg1000956.p1	17.159	+	NM_001190201 NM_001190202 TSC_hg19_v1_chr16_+_67034441 AK094783 AK300792 AK295483 BC041823 BC064573	-17396	+	AK293061 NM_173815 AK296064	-29415	+	AK025389 NM_001185176	-50567	+	TSC_hg19_v1_chr16_+_67063051 BC018509 NM_001755 NM_022845	11103	+	TSC_hg19_v1_chr16_+_67063217 AK290462 AK291834 AB463544 AF294326 BT006862 CU676254 DQ890558 DQ893719 L20298 AK311724	11344	+	TSC_hg19_v1_chr16_+_67143864 AF176088 BC004556 NM_025187	91910	+	NM_001190201|CES4A|283848|carboxylesterase 4A##NM_001190202|CES4A|283848|carboxylesterase 4A##AK094783|CES4A|283848|carboxylesterase 4A##AK300792|CES4A|283848|carboxylesterase 4A##AK295483|CES4A|283848|carboxylesterase 4A##BC041823|CES4A|283848|carboxylesterase 4A##BC064573|CES4A|283848|carboxylesterase 4A##AK293061|CES4A|283848|carboxylesterase 4A##NM_173815|CES4A|283848|carboxylesterase 4A##AK296064|CES4A|283848|carboxylesterase 4A##AK025389|CES3|23491|carboxylesterase 3##NM_001185176|CES3|23491|carboxylesterase 3##BC018509|CBFB|865|core-binding factor, beta subunit##NM_001755|CBFB|865|core-binding factor, beta subunit##NM_022845|CBFB|865|core-binding factor, beta subunit##AK290462|CBFB|865|core-binding factor, beta subunit##AK291834|CBFB|865|core-binding factor, beta subunit##AF294326|CBFB|865|core-binding factor, beta subunit##BT006862|CBFB|865|core-binding factor, beta subunit##DQ890558|CBFB|865|core-binding factor, beta subunit##DQ893719|CBFB|865|core-binding factor, beta subunit##L20298|CBFB|865|core-binding factor, beta subunit##AK311724|CBFB|865|core-binding factor, beta subunit##AF176088|C16orf70|80262|chromosome 16 open reading frame 70##BC004556|C16orf70|80262|chromosome 16 open reading frame 70##NM_025187|C16orf70|80262|chromosome 16 open reading frame 70	0.990654	CTCF.p2:-18:0.991
chr14	21166019	21166147	reg1001198.p1	17.157	+	TSC_hg19_v1_chr14_+_21156940 NM_001097577 NM_194431 BC062698 BC020704	-9151	+	TSC_hg19_v1_chr14_+_21152776 AK313989 BC015520 BC054880 BX248010	-13307	+	FJ236304 NM_001145 AK092422 NM_002937	-13730	+	NM_006683 X76383 BC096698 BC096731 BC069407	48029	+	AY358865 NM_022360 BC128030	70520	+	BC020848 NM_005615 AK313580	83135	+	NM_001097577|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_194431|RNASE4|6038|ribonuclease, RNase A family, 4##BC062698|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC020704|ANG|283|angiogenin, ribonuclease, RNase A family, 5##AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC015520|RNASE4|6038|ribonuclease, RNase A family, 4##BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BX248010|RNASE4|6038|ribonuclease, RNase A family, 4##FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5##AK092422|RNASE4|6038|ribonuclease, RNase A family, 4##NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4##NM_006683|EDDM3A|10876|epididymal protein 3A##X76383|EDDM3A|10876|epididymal protein 3A##BC096698|EDDM3A|10876|epididymal protein 3A##BC096731|EDDM3A|10876|epididymal protein 3A##BC069407|EDDM3A|10876|epididymal protein 3A##AY358865|EDDM3B|64184|epididymal protein 3B##NM_022360|EDDM3B|64184|epididymal protein 3B##BC128030|EDDM3B|64184|epididymal protein 3B##BC020848|RNASE6|6039|ribonuclease, RNase A family, k6##NM_005615|RNASE6|6039|ribonuclease, RNase A family, k6##AK313580|RNASE6|6039|ribonuclease, RNase A family, k6	0.506454	CTCF.p2:-2:0.506
chr3	124407799	124407932	reg1000897.p1	17.156	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	-104337	+	TSC_hg19_v1_chr3_+_124103674 AK131379	-304242	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-594260	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	41374	+	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	41451	+	TSC_hg19_v1_chr3_-_124605863 AB587397 DQ892778 DQ896025 M35011 AK315429 J05633	198001	-	NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##AK131379|KALRN|8997|kalirin, RhoGEF kinase##AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase##AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase##DQ892778|ITGB5|3693|integrin, beta 5##DQ896025|ITGB5|3693|integrin, beta 5##M35011|ITGB5|3693|integrin, beta 5##AK315429|ITGB5|3693|integrin, beta 5##J05633|ITGB5|3693|integrin, beta 5	0.999429	CTCF.p2:10:0.999
chr13	111108365	111108498	reg1001003.p1	17.155	+	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	-148810	+	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	-148922	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	-305696	-	BX648393 TSC_hg19_v1_chr13_+_111134980	26527	+	AK025912 TSC_hg19_v1_chr13_+_111137262	28833	+	TSC_hg19_v1_chr13_+_111138079 M24766	29657	+	AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BX648393|COL4A2|1284|collagen, type IV, alpha 2##AK025912|COL4A2|1284|collagen, type IV, alpha 2##M24766|COL4A2|1284|collagen, type IV, alpha 2	0.992147	CTCF.p2:-21:0.992
chr3	184495665	184495796	reg1001084.p1	17.152	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	-65967	-	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	-216148	+	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	-397690	+	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	34193	+	TSC_hg19_v1_chr3_+_184529983 BC140768	34265	+	TSC_hg19_v1_chr3_-_184870632 BC137178 BC137179 BC150565	374923	-	AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3##AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BC140768|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BC137178|C3orf70|285382|chromosome 3 open reading frame 70##BC137179|C3orf70|285382|chromosome 3 open reading frame 70##BC150565|C3orf70|285382|chromosome 3 open reading frame 70	0.999407	CTCF.p2:6:0.999
chr6	37019361	37019497	reg1001034.p1	17.152	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-45928	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-65159	-	AK022783 TSC_hg19_v1_chr6_-_36953950 AF176006 AF192559 BC125055 BC153873 NM_014341 BC110914	-65452	-	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	118693	+	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	205957	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	206170	+	BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##AK022783|MTCH1|23787|mitochondrial carrier 1##AF176006|MTCH1|23787|mitochondrial carrier 1##AF192559|MTCH1|23787|mitochondrial carrier 1##BC125055|MTCH1|23787|mitochondrial carrier 1##BC153873|MTCH1|23787|mitochondrial carrier 1##NM_014341|MTCH1|23787|mitochondrial carrier 1##BC110914|MTCH1|23787|mitochondrial carrier 1##NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B	0.999142	CTCF.p2:-8:0.999
chrX	13676893	13677029	reg1000985.p1	17.152	+	AK291271 AK315599 NM_152634 AK294465	-5695	+	NM_001167890 NM_015507 AK075214 AK300236 AJ245671 AF193055 AF186084 AK300137 AK315018 AY358333 BC038587 AL117610 CU691592 DQ890938	-89125	+	TSC_hg19_v1_chrX_-_13397507 D28370	-279456	-	TSC_hg19_v1_chrX_+_13707246 NM_001195328 NM_004251	30280	+	TSC_hg19_v1_chrX_+_13707248 AK290505 BC017265	30332	+	AK310542 TSC_hg19_v1_chrX_-_13752740 AK313736 BC016915 BC052618 NM_001011658 NM_001128835 NM_014563	75747	-	AK291271|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK315599|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##NM_152634|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK294465|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##NM_001167890|EGFL6|25975|EGF-like-domain, multiple 6##NM_015507|EGFL6|25975|EGF-like-domain, multiple 6##AK075214|EGFL6|25975|EGF-like-domain, multiple 6##AK300236|EGFL6|25975|EGF-like-domain, multiple 6##AJ245671|EGFL6|25975|EGF-like-domain, multiple 6##AF193055|EGFL6|25975|EGF-like-domain, multiple 6##AF186084|EGFL6|25975|EGF-like-domain, multiple 6##AK300137|EGFL6|25975|EGF-like-domain, multiple 6##AK315018|EGFL6|25975|EGF-like-domain, multiple 6##AY358333|EGFL6|25975|EGF-like-domain, multiple 6##BC038587|EGFL6|25975|EGF-like-domain, multiple 6##AL117610|EGFL6|25975|EGF-like-domain, multiple 6##DQ890938|EGFL6|25975|EGF-like-domain, multiple 6##NM_001195328|RAB9A|9367|RAB9A, member RAS oncogene family##NM_004251|RAB9A|9367|RAB9A, member RAS oncogene family##AK290505|RAB9A|9367|RAB9A, member RAS oncogene family##BC017265|RAB9A|9367|RAB9A, member RAS oncogene family##AK310542|TRAPPC2|6399|trafficking protein particle complex 2##AK313736|TRAPPC2|6399|trafficking protein particle complex 2##BC016915|TRAPPC2|6399|trafficking protein particle complex 2##BC052618|TRAPPC2|6399|trafficking protein particle complex 2##NM_001011658|TRAPPC2|6399|trafficking protein particle complex 2##NM_001128835|TRAPPC2|6399|trafficking protein particle complex 2##NM_014563|TRAPPC2|6399|trafficking protein particle complex 2	0.995042	CTCF.p2:-15:0.995
chr22	43781812	43781940	reg1001169.p1	17.146	+	AB528481 AF525689 BC127263 BC047916 TSC_hg19_v1_chr22_-_43739356 AK127719 NM_173050	-42538	-	TSC_hg19_v1_chr22_-_43583141 NM_015140	-198720	-	D63487 AL590888 CT841516 TSC_hg19_v1_chr22_-_43583100 BC001070	-198782	-	TSC_hg19_v1_chr22_+_43808019 AK290541 AK297276 AK299516 AK299531 NM_001044370	26141	+	TSC_hg19_v1_chr22_+_43808109 AK289774	26241	+	BC039315 TSC_hg19_v1_chr22_-_44208121 AK296679 AK292498 AK292411 AK058069 NM_022785 NM_198856	426265	-	AF525689|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC127263|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC047916|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##AK127719|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##NM_173050|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##NM_015140|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##D63487|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##AL590888|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##CT841516|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##BC001070|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##AK290541|MPPED1|758|metallophosphoesterase domain containing 1##AK297276|MPPED1|758|metallophosphoesterase domain containing 1##AK299516|MPPED1|758|metallophosphoesterase domain containing 1##AK299531|MPPED1|758|metallophosphoesterase domain containing 1##NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1##AK289774|MPPED1|758|metallophosphoesterase domain containing 1##BC039315|EFCAB6|64800|EF-hand calcium binding domain 6##AK296679|EFCAB6|64800|EF-hand calcium binding domain 6##AK292498|EFCAB6|64800|EF-hand calcium binding domain 6##AK292411|EFCAB6|64800|EF-hand calcium binding domain 6##AK058069|EFCAB6|64800|EF-hand calcium binding domain 6##NM_022785|EFCAB6|64800|EF-hand calcium binding domain 6##NM_198856|EFCAB6|64800|EF-hand calcium binding domain 6	0.821195	CTCF.p2:8:0.821
chr19	1279832	1279956	reg1000879.p1	17.145	+	TSC_hg19_v1_chr19_+_1275540 NM_017914 BC000890 BC012080	-4327	+	CU674448 AB528491 EU176219 EU176522 AB451225 AB451348 BT007210 TSC_hg19_v1_chr19_+_1270968	-8945	+	TSC_hg19_v1_chr19_+_1269330 NM_001280 AK095781 AK304185 AK304470 AK311601 AK128423 AF021336 AK094781 D78134 BC000901 BC000403	-10589	+	TSC_hg19_v1_chr19_+_1286081 AJ007292 NM_001405 AB463609	6071	+	TSC_hg19_v1_chr19_+_1354979 NM_032853 AK310721 U20897	75107	+	TSC_hg19_v1_chr19_+_1383882 AK092169 AX747389 NM_024407 AK128713	103992	+	NM_017914|C19orf24|55009|chromosome 19 open reading frame 24##BC000890|C19orf24|55009|chromosome 19 open reading frame 24##BC012080|C19orf24|55009|chromosome 19 open reading frame 24##EU176219|CIRBP|1153|cold inducible RNA binding protein##EU176522|CIRBP|1153|cold inducible RNA binding protein##AB451225|CIRBP|1153|cold inducible RNA binding protein##AB451348|CIRBP|1153|cold inducible RNA binding protein##BT007210|CIRBP|1153|cold inducible RNA binding protein##NM_001280|CIRBP|1153|cold inducible RNA binding protein##AK095781|CIRBP|1153|cold inducible RNA binding protein##AK304185|CIRBP|1153|cold inducible RNA binding protein##AK304470|CIRBP|1153|cold inducible RNA binding protein##AK311601|CIRBP|1153|cold inducible RNA binding protein##AK128423|CIRBP|1153|cold inducible RNA binding protein##AF021336|CIRBP|1153|cold inducible RNA binding protein##AK094781|CIRBP|1153|cold inducible RNA binding protein##D78134|CIRBP|1153|cold inducible RNA binding protein##BC000901|CIRBP|1153|cold inducible RNA binding protein##BC000403|CIRBP|1153|cold inducible RNA binding protein##AJ007292|EFNA2|1943|ephrin-A2##NM_001405|EFNA2|1943|ephrin-A2##NM_032853|MUM1|84939|melanoma associated antigen (mutated) 1##AK310721|MUM1|84939|melanoma associated antigen (mutated) 1##U20897|MUM1|84939|melanoma associated antigen (mutated) 1##AK092169|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##NM_024407|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK128713|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)	0.997974	CTCF.p2:-9:0.998
chr14	73371752	73371891	reg1001161.p1	17.142	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	-11013	-	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-971955	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-972668	+	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	21314	+	AK098542 AF311602 NM_178441	81836	-	AB046809 TSC_hg19_v1_chr14_-_73493815 AJ310569 AK027399 BC014902 BC053520 NM_021260	122010	-	AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AB046809|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AJ310569|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AK027399|ZFYVE1|53349|zinc finger, FYVE domain containing 1##BC014902|ZFYVE1|53349|zinc finger, FYVE domain containing 1##BC053520|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_021260|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.988944	CTCF.p2:19:0.989
chr8	9008251	9008369	reg1000637.p3	17.140	+	TSC_hg19_v1_chr8_-_9008167 BC043388 AK024067 NM_024607	-132	-	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	-147805	+	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	-147945	+	TSC_hg19_v1_chr8_-_9009055 AK096119 NM_001201329	790	-	TSC_hg19_v1_chr8_+_9413421 BC098394	405095	+	TSC_hg19_v1_chr8_+_9413423 AK302031	405113	+	BC043388|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK024067|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_024607|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##AK096119|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_001201329|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##BC098394|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK302031|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	0.0	
chr3	148838211	148838351	reg1001131.p1	17.138	+	AB209052 EU446704 TSC_hg19_v1_chr3_-_148804298 AK291231 L34673 BC015498 BC005260 BC044659 BC014326 BC030976 NM_003071 NM_139048	-34019	-	TSC_hg19_v1_chr3_+_148709326 AK299962 BC000033 X79537 AK312283 AF087942 U44131	-128946	+	TSC_hg19_v1_chr3_+_148709140 NM_001184720 NM_001184721 NM_004130	-129114	+	AY033141 NM_032383 TSC_hg19_v1_chr3_+_148847453 AK291631 AK055245 BC040359 AK298478 CU691866 DQ891178 DQ894360	9159	+	BC070304 NM_000096	101526	-	NM_001184723 AK313400 BC014339 AL833134 NM_138786	213121	-	AB209052|HLTF|6596|helicase-like transcription factor##EU446704|HLTF|6596|helicase-like transcription factor##AK291231|HLTF|6596|helicase-like transcription factor##L34673|HLTF|6596|helicase-like transcription factor##BC015498|HLTF|6596|helicase-like transcription factor##BC005260|HLTF|6596|helicase-like transcription factor##BC044659|HLTF|6596|helicase-like transcription factor##BC014326|HLTF|6596|helicase-like transcription factor##BC030976|HLTF|6596|helicase-like transcription factor##NM_003071|HLTF|6596|helicase-like transcription factor##NM_139048|HLTF|6596|helicase-like transcription factor##AK299962|GYG1|2992|glycogenin 1##BC000033|GYG1|2992|glycogenin 1##X79537|GYG1|2992|glycogenin 1##AK312283|GYG1|2992|glycogenin 1##AF087942|GYG1|2992|glycogenin 1##U44131|GYG1|2992|glycogenin 1##NM_001184720|GYG1|2992|glycogenin 1##NM_001184721|GYG1|2992|glycogenin 1##NM_004130|GYG1|2992|glycogenin 1##AY033141|HPS3|84343|Hermansky-Pudlak syndrome 3##NM_032383|HPS3|84343|Hermansky-Pudlak syndrome 3##AK291631|HPS3|84343|Hermansky-Pudlak syndrome 3##AK055245|HPS3|84343|Hermansky-Pudlak syndrome 3##BC040359|HPS3|84343|Hermansky-Pudlak syndrome 3##AK298478|HPS3|84343|Hermansky-Pudlak syndrome 3##DQ891178|HPS3|84343|Hermansky-Pudlak syndrome 3##DQ894360|HPS3|84343|Hermansky-Pudlak syndrome 3##BC070304|CP|1356|ceruloplasmin (ferroxidase)##NM_000096|CP|1356|ceruloplasmin (ferroxidase)##NM_001184723|TM4SF18|116441|transmembrane 4 L six family member 18##AK313400|TM4SF18|116441|transmembrane 4 L six family member 18##BC014339|TM4SF18|116441|transmembrane 4 L six family member 18##AL833134|TM4SF18|116441|transmembrane 4 L six family member 18##NM_138786|TM4SF18|116441|transmembrane 4 L six family member 18	0.740072	CTCF.p2:-22:0.740
chr19	17966485	17966609	reg1000890.p1	17.137	+	TSC_hg19_v1_chr19_-_17958822 U31601 AK296383 NM_000215 AK304392	-7701	-	TSC_hg19_v1_chr19_-_17958781 BC028068	-7758	-	BC032810 BC040435 BC053345 BC061886 BC106721 BC071706 BC106722 NM_005543 S72482 AK302780 AY082014	-34200	-	TSC_hg19_v1_chr19_+_17970726 BC066319 AK297323 AK222647 AK311774 D28393 NM_000980 AK297358 AK300809 BC007512 BC071920 L05093 X80822 AB528676 CU688140	4170	+	BX648217 NM_000453 U66088 D87920	16283	+	TSC_hg19_v1_chr19_+_18043824 NM_001136203	77277	+	U31601|JAK3|3718|Janus kinase 3##AK296383|JAK3|3718|Janus kinase 3##NM_000215|JAK3|3718|Janus kinase 3##AK304392|JAK3|3718|Janus kinase 3##BC028068|JAK3|3718|Janus kinase 3##BC032810|INSL3|3640|insulin-like 3 (Leydig cell)##BC040435|INSL3|3640|insulin-like 3 (Leydig cell)##BC053345|INSL3|3640|insulin-like 3 (Leydig cell)##BC061886|INSL3|3640|insulin-like 3 (Leydig cell)##BC106721|INSL3|3640|insulin-like 3 (Leydig cell)##BC071706|INSL3|3640|insulin-like 3 (Leydig cell)##BC106722|INSL3|3640|insulin-like 3 (Leydig cell)##NM_005543|INSL3|3640|insulin-like 3 (Leydig cell)##S72482|INSL3|3640|insulin-like 3 (Leydig cell)##AK302780|INSL3|3640|insulin-like 3 (Leydig cell)##AY082014|INSL3|3640|insulin-like 3 (Leydig cell)##BC066319|RPL18A|6142|ribosomal protein L18a##AK297323|RPL18A|6142|ribosomal protein L18a##AK222647|RPL18A|6142|ribosomal protein L18a##AK311774|RPL18A|6142|ribosomal protein L18a##D28393|RPL18A|6142|ribosomal protein L18a##NM_000980|RPL18A|6142|ribosomal protein L18a##AK297358|RPL18A|6142|ribosomal protein L18a##AK300809|RPL18A|6142|ribosomal protein L18a##BC007512|RPL18A|6142|ribosomal protein L18a##BC071920|RPL18A|6142|ribosomal protein L18a##L05093|RPL18A|6142|ribosomal protein L18a##X80822|RPL18A|6142|ribosomal protein L18a##BX648217|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##NM_000453|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##U66088|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##D87920|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##NM_001136203|CCDC124|115098|coiled-coil domain containing 124	1.022185	CTCF.p2:19:1.000
chr20	24975601	24975720	reg1000828.p1	17.134	+	TSC_hg19_v1_chr20_-_24973410 NM_020531 AK301959	-2173	-	TSC_hg19_v1_chr20_-_24973366 AB033767 AK291129	-2279	-	TSC_hg19_v1_chr20_-_24973355 CU678464 BC003501	-2330	-	AK125058 AK296306 NM_001252676	37664	-	AL832939 BC114612 AK314440 TSC_hg19_v1_chr20_-_25038780 BC044588 BC055008 AK127566 BC039261 NM_001252675 NM_001252677 NM_032501	63019	-	BC126228 BC136497 AF251033 AF251034 DQ854807 DQ854808 DQ854809 DQ854810 DQ854811 DQ854812 NM_014588 NM_199425	87101	-	NM_020531|C20orf3|57136|chromosome 20 open reading frame 3##AK301959|C20orf3|57136|chromosome 20 open reading frame 3##AB033767|C20orf3|57136|chromosome 20 open reading frame 3##AK291129|C20orf3|57136|chromosome 20 open reading frame 3##BC003501|C20orf3|57136|chromosome 20 open reading frame 3##AK125058|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK296306|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252676|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AL832939|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC114612|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK314440|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC044588|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC055008|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK127566|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC039261|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252675|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252677|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_032501|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC126228|VSX1|30813|visual system homeobox 1##BC136497|VSX1|30813|visual system homeobox 1##AF251033|VSX1|30813|visual system homeobox 1##AF251034|VSX1|30813|visual system homeobox 1##DQ854807|VSX1|30813|visual system homeobox 1##DQ854808|VSX1|30813|visual system homeobox 1##DQ854809|VSX1|30813|visual system homeobox 1##DQ854810|VSX1|30813|visual system homeobox 1##DQ854811|VSX1|30813|visual system homeobox 1##DQ854812|VSX1|30813|visual system homeobox 1##NM_014588|VSX1|30813|visual system homeobox 1##NM_199425|VSX1|30813|visual system homeobox 1	0.99783	CTCF.p2:-14:0.998
chr1	9161725	9161838	reg1000585.p2	17.131	+	TSC_hg19_v1_chr1_-_9129695 M55531 AK290398 AK294368 NM_001135585 NM_003039	-32005	-	TSC_hg19_v1_chr1_-_9129644 AK289849 BC001692 BC001820 AK295785 BC035878	-32140	-	TSC_hg19_v1_chr1_-_9129605 DQ892291 DQ895491 CU674838 AK300091	-32182	-	DQ892804 DQ896051 TSC_hg19_v1_chr1_-_9189169 AK022194 AK292888 AK304154 AY768808 NM_024980 BC094733 BC018691	27440	-	TSC_hg19_v1_chr1_+_9294832 BC081559	133034	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	133136	+	M55531|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK290398|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK294368|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_001135585|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_003039|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK289849|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001692|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001820|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK295785|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC035878|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892291|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ895491|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK300091|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892804|GPR157|80045|G protein-coupled receptor 157##DQ896051|GPR157|80045|G protein-coupled receptor 157##AK022194|GPR157|80045|G protein-coupled receptor 157##AK292888|GPR157|80045|G protein-coupled receptor 157##AK304154|GPR157|80045|G protein-coupled receptor 157##AY768808|GPR157|80045|G protein-coupled receptor 157##NM_024980|GPR157|80045|G protein-coupled receptor 157##BC018691|GPR157|80045|G protein-coupled receptor 157##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	0.810219	CTCF.p2:10:0.810
chr5	139348473	139348622	reg1000915.p1	17.131	+	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	-173141	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	-288155	+	AF151029 TSC_hg19_v1_chr5_+_139060229	-288335	+	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	74181	-	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	74298	-	TSC_hg19_v1_chr5_+_139493703 M96684 NM_005859 BC110574 BC110594 BC036087 AB464679 BT019388	145180	+	AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2##M96684|PURA|5813|purine-rich element binding protein A##NM_005859|PURA|5813|purine-rich element binding protein A##BC110574|PURA|5813|purine-rich element binding protein A##BC110594|PURA|5813|purine-rich element binding protein A##BC036087|PURA|5813|purine-rich element binding protein A##BT019388|PURA|5813|purine-rich element binding protein A	1.989318	CTCF.p2:-28:0.995	CTCF.p2:30:0.994
chr17	72453816	72453916	reg1000636.p2	17.127	+	TSC_hg19_v1_chr17_+_72439191 AK126429	-14661	+	AJ276102 NM_018653	-24031	+	AK075397 AF207989 AK222909 TSC_hg19_v1_chr17_+_72428254 AK000249	-25611	+	NM_007261 AJ224864 BC032352	8672	+	AF020314 TSC_hg19_v1_chr17_+_72462772	8904	+	TSC_hg19_v1_chr17_+_72462821 AF161346 AJ010101 AJ010102 AJ010103 AJ238323 AK309636 BC020681 AB590938 CU689350	8944	+	AK126429|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AJ276102|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_018653|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_007261|CD300A|11314|CD300a molecule##AJ224864|CD300A|11314|CD300a molecule##BC032352|CD300A|11314|CD300a molecule##AF020314|CD300A|11314|CD300a molecule##AF161346|CD300A|11314|CD300a molecule##AJ010101|CD300A|11314|CD300a molecule##AJ010102|CD300A|11314|CD300a molecule##AJ010103|CD300A|11314|CD300a molecule##AJ238323|CD300A|11314|CD300a molecule##AK309636|CD300A|11314|CD300a molecule##BC020681|CD300A|11314|CD300a molecule	0.981758	CTCF.p2:8:0.982
chr11	66176004	66176129	reg1000303.p1	17.125	+	AF029358 BC093634 BC143335 X86681 TSC_hg19_v1_chr11_-_66139222 AF034102 AF401235 NM_001532	-36889	-	CU692428 DQ892706 DQ895957 AK075354 AK098779 AK225182 TSC_hg19_v1_chr11_-_66115101 AK294604 BC021965 AK293715 AF029893 AK098389 NM_006876	-60975	-	BC009834 TSC_hg19_v1_chr11_-_66112576 AF159141 AK310991 NM_001024957 NM_015399	-63506	-	AK096253 NM_178864 TSC_hg19_v1_chr11_+_66188505 AB049469 BC105001 BC105003 BC143630 EU446888	12495	+	TSC_hg19_v1_chr11_-_66206308 BC108277 AB049638 AK290084 AK223112 BC005002 AF151871 NM_016050 NM_170738 NM_170739	30220	-	AK094060 AX748433 NM_001243135	57731	+	AF029358|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC093634|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC143335|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##X86681|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF034102|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF401235|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##NM_001532|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##BC009834|BRMS1|25855|breast cancer metastasis suppressor 1##AF159141|BRMS1|25855|breast cancer metastasis suppressor 1##AK310991|BRMS1|25855|breast cancer metastasis suppressor 1##NM_001024957|BRMS1|25855|breast cancer metastasis suppressor 1##NM_015399|BRMS1|25855|breast cancer metastasis suppressor 1##AK096253|NPAS4|266743|neuronal PAS domain protein 4##NM_178864|NPAS4|266743|neuronal PAS domain protein 4##AB049469|NPAS4|266743|neuronal PAS domain protein 4##BC105001|NPAS4|266743|neuronal PAS domain protein 4##BC105003|NPAS4|266743|neuronal PAS domain protein 4##BC143630|NPAS4|266743|neuronal PAS domain protein 4##EU446888|NPAS4|266743|neuronal PAS domain protein 4##BC108277|MRPL11|65003|mitochondrial ribosomal protein L11##AB049638|MRPL11|65003|mitochondrial ribosomal protein L11##AK290084|MRPL11|65003|mitochondrial ribosomal protein L11##AK223112|MRPL11|65003|mitochondrial ribosomal protein L11##BC005002|MRPL11|65003|mitochondrial ribosomal protein L11##AF151871|MRPL11|65003|mitochondrial ribosomal protein L11##NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11##NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11##NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11##AK094060|PELI3|246330|pellino homolog 3 (Drosophila)##NM_001243135|PELI3|246330|pellino homolog 3 (Drosophila)	1.130836	CTCF.p2:-26:0.740	CTCF.p2:41:0.391
chr15	44358544	44358684	reg1001315.p1	17.123	+	NM_001167941 NM_024908 TSC_hg19_v1_chr15_+_44119199 AK290933 BC025247 AK023035 BC051855 EF011624 CU690868	-239427	+	AB463886 CU690792 DQ893389 DQ896709 TSC_hg19_v1_chr15_-_44116882 U04209 BC023557 BC050742 AK312867 NM_005926	-241756	-	TSC_hg19_v1_chr15_+_44092806 AK022435 AF161485 AF049613	-265812	+	BC043486 CU691018 BC007796 BC053647 NM_032892 TSC_hg19_v1_chr15_-_44487448	128736	-	AK090572 AX746516 TSC_hg19_v1_chr15_-_44487470	128855	-	TSC_hg19_v1_chr15_+_44580919 NM_138423 NM_177974 BC012124	222285	+	NM_001167941|WDR76|79968|WD repeat domain 76##NM_024908|WDR76|79968|WD repeat domain 76##AK290933|WDR76|79968|WD repeat domain 76##BC025247|WDR76|79968|WD repeat domain 76##AK023035|WDR76|79968|WD repeat domain 76##BC051855|WDR76|79968|WD repeat domain 76##EF011624|WDR76|79968|WD repeat domain 76##DQ893389|MFAP1|4236|microfibrillar-associated protein 1##DQ896709|MFAP1|4236|microfibrillar-associated protein 1##U04209|MFAP1|4236|microfibrillar-associated protein 1##BC023557|MFAP1|4236|microfibrillar-associated protein 1##BC050742|MFAP1|4236|microfibrillar-associated protein 1##AK312867|MFAP1|4236|microfibrillar-associated protein 1##NM_005926|MFAP1|4236|microfibrillar-associated protein 1##AK022435|C15orf63|25764|chromosome 15 open reading frame 63##AF161485|C15orf63|25764|chromosome 15 open reading frame 63##AF049613|C15orf63|25764|chromosome 15 open reading frame 63##BC043486|FRMD5|84978|FERM domain containing 5##BC007796|FRMD5|84978|FERM domain containing 5##BC053647|FRMD5|84978|FERM domain containing 5##NM_032892|FRMD5|84978|FERM domain containing 5##AK090572|FRMD5|84978|FERM domain containing 5##NM_138423|CASC4|113201|cancer susceptibility candidate 4##NM_177974|CASC4|113201|cancer susceptibility candidate 4##BC012124|CASC4|113201|cancer susceptibility candidate 4	0.998988	CTCF.p2:4:0.999
chr9	33081409	33081548	reg1000800.p1	17.123	+	TSC_hg19_v1_chr9_-_33076673 NM_018225	-4786	-	CU678268 DQ893005 DQ896251 TSC_hg19_v1_chr9_-_33076667 AK001667 BC002876 EF011613 AK225587 AK304767 AK225559	-4841	-	BT007292 CU678881 DQ891091 EU176556 TSC_hg19_v1_chr9_+_33026519	-54978	+	TSC_hg19_v1_chr9_-_33167158 AK316294	85646	-	AB590749 X55415 TSC_hg19_v1_chr9_-_33167196 AK296928 AK312797	85708	-	D29805 X13223 X14085 M22921 U10474 TSC_hg19_v1_chr9_-_33167262	85769	-	NM_018225|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##DQ893005|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##DQ896251|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##AK001667|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##BC002876|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##EF011613|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##AK225587|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##AK304767|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##AK225559|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##BT007292|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##DQ891091|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##EU176556|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##AK316294|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X55415|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AK296928|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AK312797|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##D29805|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X13223|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X14085|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##M22921|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##U10474|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	0.984726	CTCF.p2:-18:0.985
chr5	167541564	167541680	reg1000799.p1	17.121	+	HE578282 HE578283 NM_001122679	-829780	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-4608979	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-4611334	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	177199	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	371852	+	TSC_hg19_v1_chr5_+_167956546 AX721195	414995	+	NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.464965	CTCF.p2:-11:0.465
chr3	136732821	136732966	reg1001145.p1	17.119	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-56063	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-83556	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	-151801	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	750254	+	AK098474 NM_001002026 AF349452	984786	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	996110	+	AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18	0.999489	CTCF.p2:16:0.999
chr5	150826993	150827115	reg1000639.p1	17.119	+	BC101100 BC101101 BC101102 BC101103 AK297682 AY162214 AK122630 AK309575 NM_181776	-99935	-	AK127978 NM_001145017 NM_181774	-143725	-	NM_000405 NM_001167607 TSC_hg19_v1_chr5_+_150632745 AK225978 L01439 M76477 AK312494 X62078 AK298867 BC009273 X61095 CU679281 DQ891914 DQ895098 X16087	-194339	+	TSC_hg19_v1_chr5_+_150827163 NM_078483 BX537963 AY227111	106	+	AK309323 TSC_hg19_v1_chr5_+_150827187	135	+	TSC_hg19_v1_chr5_+_150827239 AY162213 BC136437 BC136438	190	+	BC101100|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101101|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101102|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101103|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK297682|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AY162214|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK309575|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##NM_181776|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK127978|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_001145017|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_181774|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_000405|GM2A|2760|GM2 ganglioside activator##NM_001167607|GM2A|2760|GM2 ganglioside activator##L01439|GM2A|2760|GM2 ganglioside activator##M76477|GM2A|2760|GM2 ganglioside activator##AK312494|GM2A|2760|GM2 ganglioside activator##X62078|GM2A|2760|GM2 ganglioside activator##AK298867|GM2A|2760|GM2 ganglioside activator##BC009273|GM2A|2760|GM2 ganglioside activator##X61095|GM2A|2760|GM2 ganglioside activator##DQ891914|GM2A|2760|GM2 ganglioside activator##DQ895098|GM2A|2760|GM2 ganglioside activator##X16087|GM2A|2760|GM2 ganglioside activator##NM_078483|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BX537963|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AY227111|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AK309323|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AY162213|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136437|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136438|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1	0.327004	CTCF.p2:4:0.327
chr10	125727294	125727428	reg1001149.p1	17.116	+	BC137492 BC146862 AY358565 NM_198148	-75865	-	AJ505757 NM_153442 BC112011 BC113462	-301484	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-813005	+	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	124538	-	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	125792	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	380112	-	BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase	1.038544	CTCF.p2:13:0.997
chr1	184191818	184191953	reg1000216.p1	17.112	+	TSC_hg19_v1_chr1_+_184020866 AF288394 NM_001127394 NM_052965 BC022030 AK098196 CU692464 AK296655 AK307241	-171025	+	AB011156 AF288389 NM_015101 BC035672 AK095192 TSC_hg19_v1_chr1_-_184006893	-185021	-	AB385353 CU690156 AK293973 TSC_hg19_v1_chr1_-_184006634	-185320	-	TSC_hg19_v1_chr1_+_184356162 NM_030806	164268	+	TSC_hg19_v1_chr1_+_184356194 BC028567	164312	+	AF312864 TSC_hg19_v1_chr1_+_184356245 AY258286	164381	+	AF288394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##NM_001127394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##NM_052965|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##BC022030|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AK098196|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AK296655|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AK307241|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AB011156|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AF288389|GLT25D2|23127|glycosyltransferase 25 domain containing 2##NM_015101|GLT25D2|23127|glycosyltransferase 25 domain containing 2##BC035672|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AK095192|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AK293973|GLT25D2|23127|glycosyltransferase 25 domain containing 2##NM_030806|C1orf21|81563|chromosome 1 open reading frame 21##BC028567|C1orf21|81563|chromosome 1 open reading frame 21##AF312864|C1orf21|81563|chromosome 1 open reading frame 21##AY258286|C1orf21|81563|chromosome 1 open reading frame 21	0.99586	CTCF.p2:5:0.996
chr8	21994993	21995116	reg1001124.p1	17.110	+	TSC_hg19_v1_chr8_-_21988524 NM_005144 NM_018411	-6464	-	CU677759 AK026147 TSC_hg19_v1_chr8_-_21966936 BC016902 NM_024815	-28166	-	TSC_hg19_v1_chr8_+_21946730 AK294646	-48307	+	AY562242 CR457353 AK025930 AF218014 AK302352 TSC_hg19_v1_chr8_-_21999400 BC050622 AK025899 AK172846 BC013048 NM_025232	4173	-	AF467956 BC142997 TSC_hg19_v1_chr8_-_22014320 BC036494 AJ487961 NM_139278	19249	-	J03553 NM_001172357 NM_001172410 NM_003018 BC105594 AK315742 BC005913 AK298119 J03517 DQ884411	24200	+	NM_005144|HR|55806|hairless homolog (mouse)##NM_018411|HR|55806|hairless homolog (mouse)##AK026147|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##BC016902|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##NM_024815|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##AK294646|FAM160B2|64760|family with sequence similarity 160, member B2##AY562242|REEP4|80346|receptor accessory protein 4##CR457353|REEP4|80346|receptor accessory protein 4##AK025930|REEP4|80346|receptor accessory protein 4##AF218014|REEP4|80346|receptor accessory protein 4##AK302352|REEP4|80346|receptor accessory protein 4##BC050622|REEP4|80346|receptor accessory protein 4##AK025899|REEP4|80346|receptor accessory protein 4##AK172846|REEP4|80346|receptor accessory protein 4##BC013048|REEP4|80346|receptor accessory protein 4##NM_025232|REEP4|80346|receptor accessory protein 4##AF467956|LGI3|203190|leucine-rich repeat LGI family, member 3##BC142997|LGI3|203190|leucine-rich repeat LGI family, member 3##BC036494|LGI3|203190|leucine-rich repeat LGI family, member 3##AJ487961|LGI3|203190|leucine-rich repeat LGI family, member 3##NM_139278|LGI3|203190|leucine-rich repeat LGI family, member 3##J03553|SFTPC|6440|surfactant protein C##NM_001172357|SFTPC|6440|surfactant protein C##NM_001172410|SFTPC|6440|surfactant protein C##NM_003018|SFTPC|6440|surfactant protein C##BC105594|SFTPC|6440|surfactant protein C##AK315742|SFTPC|6440|surfactant protein C##BC005913|SFTPC|6440|surfactant protein C##AK298119|SFTPC|6440|surfactant protein C##J03517|SFTPC|6440|surfactant protein C##DQ884411|SFTPC|6440|surfactant protein C	0.999201	CTCF.p2:3:0.999
chr19	35464190	35464323	reg1001002.p1	17.102	+	NM_175872 TSC_hg19_v1_chr19_-_35454952	-9298	-	AK304550 TSC_hg19_v1_chr19_-_35454915	-9363	-	NM_001099437 NM_001099438 NM_194325 TSC_hg19_v1_chr19_+_35417809 BC142996 BX640666 AK295515 AK290435	-46378	+	TSC_hg19_v1_chr19_+_35491226 AK074864 BC014077 NM_001136199 NM_020895	27008	+	AK074914 TSC_hg19_v1_chr19_+_35491368	27100	+	BC067122 NM_001037 NM_199037 L10338 AK295477 L16242 AK313279 AB528721 AY391842 BT019923	57401	+	NM_175872|ZNF792|126375|zinc finger protein 792##AK304550|ZNF792|126375|zinc finger protein 792##NM_001099437|ZNF30|90075|zinc finger protein 30##NM_001099438|ZNF30|90075|zinc finger protein 30##NM_194325|ZNF30|90075|zinc finger protein 30##BC142996|ZNF30|90075|zinc finger protein 30##BX640666|ZNF30|90075|zinc finger protein 30##AK295515|ZNF30|90075|zinc finger protein 30##AK290435|ZNF30|90075|zinc finger protein 30##AK074864|GRAMD1A|57655|GRAM domain containing 1A##BC014077|GRAMD1A|57655|GRAM domain containing 1A##NM_001136199|GRAMD1A|57655|GRAM domain containing 1A##NM_020895|GRAMD1A|57655|GRAM domain containing 1A##AK074914|GRAMD1A|57655|GRAM domain containing 1A##BC067122|SCN1B|6324|sodium channel, voltage-gated, type I, beta##NM_001037|SCN1B|6324|sodium channel, voltage-gated, type I, beta##NM_199037|SCN1B|6324|sodium channel, voltage-gated, type I, beta##L10338|SCN1B|6324|sodium channel, voltage-gated, type I, beta##AK295477|SCN1B|6324|sodium channel, voltage-gated, type I, beta##L16242|SCN1B|6324|sodium channel, voltage-gated, type I, beta##AK313279|SCN1B|6324|sodium channel, voltage-gated, type I, beta##AY391842|SCN1B|6324|sodium channel, voltage-gated, type I, beta##BT019923|SCN1B|6324|sodium channel, voltage-gated, type I, beta	1.02173	CTCF.p2:-14:1.000
chr11	122652244	122652371	reg1001357.p1	17.100	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	-125760	+	BC130361 BC130363 AF303179 NM_001001786	-665446	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-1191209	+	BC070266 AK313578 AF001622 NM_019604	56922	+	AK097534 BC068507 NM_024806 NM_199124	101124	+	AB231738 NM_001098169	200049	-	NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63##AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox	0.608929	CTCF.p2:0:0.609
chr16	15521542	15521669	reg1001159.p1	17.095	+	TSC_hg19_v1_chr16_+_15489637 AK096918 AK293380 BC061514	-31955	+	TSC_hg19_v1_chr16_+_15489610 DQ004255 DQ004256 NM_001128423 NM_173803	-32004	+	AB527833 AK300253 HQ258337 BC036182 AK314769 AK316520 BC132688 BC132690 BC104660 AJ272050 AF227156 NM_018427 AK225662	-333477	-	AK057180 NM_033201 TSC_hg19_v1_chr16_+_15528363 AK293431 BC008967	6795	+	BC023603 NM_001142469	74517	+	BC137165 BC137170 BC144514 BC144515 TSC_hg19_v1_chr16_-_15737004 AK302667 AK095840 BC064914 NM_001184998 NM_001184999 NM_014647	215388	-	AK096918|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK293380|MPV17L|255027|MPV17 mitochondrial membrane protein-like##BC061514|MPV17L|255027|MPV17 mitochondrial membrane protein-like##DQ004255|MPV17L|255027|MPV17 mitochondrial membrane protein-like##DQ004256|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_001128423|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_173803|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##HQ258337|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK057180|C16orf45|89927|chromosome 16 open reading frame 45##NM_033201|C16orf45|89927|chromosome 16 open reading frame 45##AK293431|C16orf45|89927|chromosome 16 open reading frame 45##BC008967|C16orf45|89927|chromosome 16 open reading frame 45##BC023603|C16orf45|89927|chromosome 16 open reading frame 45##NM_001142469|C16orf45|89927|chromosome 16 open reading frame 45##BC137165|KIAA0430|9665|KIAA0430##BC137170|KIAA0430|9665|KIAA0430##BC144514|KIAA0430|9665|KIAA0430##BC144515|KIAA0430|9665|KIAA0430##AK302667|KIAA0430|9665|KIAA0430##AK095840|KIAA0430|9665|KIAA0430##BC064914|KIAA0430|9665|KIAA0430##NM_001184998|KIAA0430|9665|KIAA0430##NM_001184999|KIAA0430|9665|KIAA0430##NM_014647|KIAA0430|9665|KIAA0430	0.997997	CTCF.p2:-4:0.998
chr8	135703659	135703781	reg1000852.p1	17.093	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-1119623	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-1394223	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1500390	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	5074	-	TSC_hg19_v1_chr8_-_135725053 AB463359	21359	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	21554	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.698273	CTCF.p2:-22:0.698
chr17	33325341	33325465	reg1000952.p1	17.086	+	TSC_hg19_v1_chr17_+_33307530 NM_002311 NM_013975 BC068005 AK300363 AK308407 U40671 X84740 BC009026	-17815	+	TSC_hg19_v1_chr17_+_33288558 AK315671 NM_052857 AK055707 AB590460 BC002913 BC011584 DQ892326 DQ895528	-36814	+	TSC_hg19_v1_chr17_-_33288480 AK302344 BC027591 NM_001193529 NM_001193530 NM_006584	-36901	-	TSC_hg19_v1_chr17_-_33390690 CR933651 NM_001017368	65314	-	TSC_hg19_v1_chr17_-_33416298 AK093112 AX747930 BC028424	90908	-	AB464124 DQ892318 DQ895520 BC002723 AB013341 AB016223 AB016224 AB016225 Y15572 AF034956 BC014422 TSC_hg19_v1_chr17_-_33446836 AK296241 BX647297 AK301249	121342	-	NM_002311|LIG3|3980|ligase III, DNA, ATP-dependent##NM_013975|LIG3|3980|ligase III, DNA, ATP-dependent##BC068005|LIG3|3980|ligase III, DNA, ATP-dependent##AK300363|LIG3|3980|ligase III, DNA, ATP-dependent##AK308407|LIG3|3980|ligase III, DNA, ATP-dependent##U40671|LIG3|3980|ligase III, DNA, ATP-dependent##X84740|LIG3|3980|ligase III, DNA, ATP-dependent##BC009026|LIG3|3980|ligase III, DNA, ATP-dependent##AK315671|ZNF830|91603|zinc finger protein 830##NM_052857|ZNF830|91603|zinc finger protein 830##AK055707|ZNF830|91603|zinc finger protein 830##BC002913|ZNF830|91603|zinc finger protein 830##BC011584|ZNF830|91603|zinc finger protein 830##DQ892326|ZNF830|91603|zinc finger protein 830##DQ895528|ZNF830|91603|zinc finger protein 830##AK302344|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC027591|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193529|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193530|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_006584|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1##NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1##AK093112|RFFL|117584|ring finger and FYVE-like domain containing 1##BC028424|RFFL|117584|ring finger and FYVE-like domain containing 1##DQ892318|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##DQ895520|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC002723|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB013341|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016223|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016224|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016225|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##Y15572|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AF034956|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC014422|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK296241|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BX647297|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK301249|RAD51D|5892|RAD51 homolog D (S. cerevisiae)	0.990667	CTCF.p2:-8:0.991
chr12	57463358	57463486	reg1001000.p1	17.082	+	AF105424 AF127026 NM_005379 BC059387	-19543	-	AF216586 AF186112 AX810719 AF136174 AX810703 AF537113 AF537114 AF537115 AF537116 AF537117 AF537118 AF537119 AF537120 AF537121 AY358679 BC032145 NM_001178054 NM_013251	-53113	-	BC140890 BC146867 AB002350 BC152461 TSC_hg19_v1_chr12_-_57400241 AK292468 NM_014830	-63171	-	TSC_hg19_v1_chr12_-_57472533 HQ258223 AB383838 AB006624	9089	-	TSC_hg19_v1_chr12_-_57472537 BC071597 BC117436 BC126300 BC144029 CR749406 AK294566	9118	-	TSC_hg19_v1_chr12_-_57472548 AL833310 AL833311	9127	-	AF105424|MYO1A|4640|myosin IA##AF127026|MYO1A|4640|myosin IA##NM_005379|MYO1A|4640|myosin IA##BC059387|MYO1A|4640|myosin IA##AF216586|TAC3|6866|tachykinin 3##AF186112|TAC3|6866|tachykinin 3##AF537113|TAC3|6866|tachykinin 3##AF537114|TAC3|6866|tachykinin 3##AF537115|TAC3|6866|tachykinin 3##AF537116|TAC3|6866|tachykinin 3##AF537117|TAC3|6866|tachykinin 3##AF537118|TAC3|6866|tachykinin 3##AF537119|TAC3|6866|tachykinin 3##AF537120|TAC3|6866|tachykinin 3##AF537121|TAC3|6866|tachykinin 3##AY358679|TAC3|6866|tachykinin 3##BC032145|TAC3|6866|tachykinin 3##NM_001178054|TAC3|6866|tachykinin 3##NM_013251|TAC3|6866|tachykinin 3##BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39##BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39##AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39##BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39##AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39##NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39##HQ258223|TMEM194A|23306|transmembrane protein 194A##AB006624|TMEM194A|23306|transmembrane protein 194A##BC071597|TMEM194A|23306|transmembrane protein 194A##BC117436|TMEM194A|23306|transmembrane protein 194A##BC126300|TMEM194A|23306|transmembrane protein 194A##BC144029|TMEM194A|23306|transmembrane protein 194A##CR749406|TMEM194A|23306|transmembrane protein 194A##AK294566|TMEM194A|23306|transmembrane protein 194A##AL833310|TMEM194A|23306|transmembrane protein 194A##AL833311|TMEM194A|23306|transmembrane protein 194A	0.08043	
chr6	155648790	155648938	reg1000913.p1	17.082	+	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-13241	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-13279	-	BC020838 NM_001001346	-63718	+	AF190122 NM_015718	128172	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	1450199	+	TSC_hg19_v1_chr6_+_157099206 AB587572	1450361	+	BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##BC020838|CLDN20|49861|claudin 20##NM_001001346|CLDN20|49861|claudin 20##AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.933259	CTCF.p2:-33:0.933
chr1	109104480	109104613	reg1001028.p1	17.079	+	BC127898 BC150530 NM_001010883 BC140863 BC140865	-1504	+	NM_001143987 NM_001143988 BC125161 BC125162	-111624	+	BC125161 BC125162 AK057395 AK316438 AK302318 NM_001143989	-317864	-	BC088366 TSC_hg19_v1_chr1_-_109203698 NM_001102592 BC012198	99222	-	TSC_hg19_v1_chr1_-_109204071 AK311542 AK310152 AK055087 NM_144584	99545	-	TSC_hg19_v1_chr1_+_109234948 NM_018061 BC040127 BC053838 BC034581 BC007757 BC024275 BC009453 BC016296 AL833950 AK001192 BC130346 BC132963 BC144243 BC107801 CU691032	130514	+	BC127898|FAM102B|284611|family with sequence similarity 102, member B##BC150530|FAM102B|284611|family with sequence similarity 102, member B##NM_001010883|FAM102B|284611|family with sequence similarity 102, member B##BC140863|FAM102B|284611|family with sequence similarity 102, member B##BC140865|FAM102B|284611|family with sequence similarity 102, member B##NM_001143987|NBPF6|653149|neuroblastoma breakpoint family, member 6##NM_001143988|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4##NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4##BC088366|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_001102592|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##BC012198|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK311542|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK310152|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK055087|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_144584|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_018061|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC040127|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC053838|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC034581|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC007757|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC024275|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC009453|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC016296|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##AL833950|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##AK001192|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC130346|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC132963|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC144243|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC107801|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	0.995937	CTCF.p2:10:0.996
chr20	39801907	39802027	reg1000951.p1	17.078	+	TSC_hg19_v1_chr20_-_39766625 BC035080	-35359	-	TSC_hg19_v1_chr20_+_39766146 NM_002660 NM_182811 BC136466 BC144136 M34667	-35779	+	TSC_hg19_v1_chr20_+_39765861 AB210028	-36105	+	AK122905 AK097523 AB081948 BC047070 AK292415 NM_015035	126756	-	TSC_hg19_v1_chr20_-_39946149 AB007855	144248	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	167548	+	NM_002660|PLCG1|5335|phospholipase C, gamma 1##NM_182811|PLCG1|5335|phospholipase C, gamma 1##BC136466|PLCG1|5335|phospholipase C, gamma 1##BC144136|PLCG1|5335|phospholipase C, gamma 1##M34667|PLCG1|5335|phospholipase C, gamma 1##AB210028|PLCG1|5335|phospholipase C, gamma 1##AK122905|ZHX3|23051|zinc fingers and homeoboxes 3##AK097523|ZHX3|23051|zinc fingers and homeoboxes 3##AB081948|ZHX3|23051|zinc fingers and homeoboxes 3##BC047070|ZHX3|23051|zinc fingers and homeoboxes 3##AK292415|ZHX3|23051|zinc fingers and homeoboxes 3##NM_015035|ZHX3|23051|zinc fingers and homeoboxes 3##AB007855|ZHX3|23051|zinc fingers and homeoboxes 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3	0.973101	CTCF.p2:-11:0.973
chr17	28258477	28258611	reg1001052.p1	17.075	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	-1411	-	AK302745 AK303060 NM_001145053 AK299608	-1648	+	TSC_hg19_v1_chr17_-_28088446 BC011636	-170086	-	NM_198529 BX648689 BC137519	10160	+	TSC_hg19_v1_chr17_+_28443846 AK297102 AL136806 NM_032141 AK094552 BC062425 AK313963 BC105044 BC105046 BC143417 BC143539 BC046116 BC040118 AF161358 BC016313 AB462988 AM392705 AM392719 CR533555	185297	+	NM_001045	304409	-	AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##BC011636|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5##AK297102|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AL136806|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_032141|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK094552|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC062425|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK313963|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105044|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105046|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143417|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143539|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC046116|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC040118|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AF161358|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC016313|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392705|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392719|NSRP1|84081|nuclear speckle splicing regulatory protein 1##CR533555|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_001045|SLC6A4|6532|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4	0.996919	CTCF.p2:11:0.997
chr17	72489598	72489721	reg1000689.p2	17.075	+	TSC_hg19_v1_chr17_+_72462821 AF161346 AJ010101 AJ010102 AJ010103 AJ238323 AK309636 BC020681 AB590938 CU689350	-26849	+	AF020314 TSC_hg19_v1_chr17_+_72462772	-26889	+	NM_007261 AJ224864 BC032352	-27121	+	AF427618 AY359025 TSC_hg19_v1_chr17_-_72527570 AY646929	37884	-	TSC_hg19_v1_chr17_-_72527597 DQ893585 DQ896833 BC028091 AK290925 AK298665 NM_174892	37943	-	X66171 TSC_hg19_v1_chr17_-_72542230	52530	-	AF161346|CD300A|11314|CD300a molecule##AJ010101|CD300A|11314|CD300a molecule##AJ010102|CD300A|11314|CD300a molecule##AJ010103|CD300A|11314|CD300a molecule##AJ238323|CD300A|11314|CD300a molecule##AK309636|CD300A|11314|CD300a molecule##BC020681|CD300A|11314|CD300a molecule##AF020314|CD300A|11314|CD300a molecule##NM_007261|CD300A|11314|CD300a molecule##AJ224864|CD300A|11314|CD300a molecule##BC032352|CD300A|11314|CD300a molecule##AF427618|CD300LB|124599|CD300 molecule-like family member b##AY359025|CD300LB|124599|CD300 molecule-like family member b##AY646929|CD300LB|124599|CD300 molecule-like family member b##DQ893585|CD300LB|124599|CD300 molecule-like family member b##DQ896833|CD300LB|124599|CD300 molecule-like family member b##BC028091|CD300LB|124599|CD300 molecule-like family member b##AK290925|CD300LB|124599|CD300 molecule-like family member b##AK298665|CD300LB|124599|CD300 molecule-like family member b##NM_174892|CD300LB|124599|CD300 molecule-like family member b##X66171|CD300C|10871|CD300c molecule	0.462194	CTCF.p2:8:0.462
chr15	22511191	22511314	reg1001367.p1	17.068	+	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	-38030	-	BC136597 BC136598 NM_001005241 DQ786223	-128807	+	BC136985 NM_001004719	-142775	+	AK097517 NM_001001413	224993	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	322218	+	TSC_hg19_v1_chr15_+_22892666 AY763577	381347	+	BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AY763577|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	0.994991	CTCF.p2:-3:0.995
chr12	76430998	76431138	reg1001025.p1	17.067	+	TSC_hg19_v1_chr12_-_76425376 AK304224 AB587598 NM_007350 Z50194	-5541	-	TSC_hg19_v1_chr12_-_76425369 BC126425 BC130427 BC110820 U92983 BC018929	-5778	-	AF220656 TSC_hg19_v1_chr12_-_76424608	-6521	-	TSC_hg19_v1_chr12_-_76478393 AK295147 M86667	47310	-	TSC_hg19_v1_chr12_-_76478466 BC002387 AL162068 AK122670 AK298936 D28430 AK297500 AK304787	47420	-	NM_004537 NM_139207	47669	-	AK304224|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##NM_007350|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##Z50194|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC126425|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC130427|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC110820|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##U92983|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC018929|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##AF220656|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##AK295147|NAP1L1|4673|nucleosome assembly protein 1-like 1##M86667|NAP1L1|4673|nucleosome assembly protein 1-like 1##BC002387|NAP1L1|4673|nucleosome assembly protein 1-like 1##AL162068|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK122670|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK298936|NAP1L1|4673|nucleosome assembly protein 1-like 1##D28430|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK297500|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK304787|NAP1L1|4673|nucleosome assembly protein 1-like 1##NM_004537|NAP1L1|4673|nucleosome assembly protein 1-like 1##NM_139207|NAP1L1|4673|nucleosome assembly protein 1-like 1	0.298226	CTCF.p2:9:0.298
chr3	13133778	13133908	reg1001116.p1	17.065	+	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	-19245	-	TSC_hg19_v1_chr3_-_13057189 BC071805	-76625	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	-124735	-	AB020713 TSC_hg19_v1_chr3_-_13384784	250922	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	327889	-	TSC_hg19_v1_chr3_-_13461832 BC020573 NM_024923	327974	-	AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##AB020713|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa##BC020573|NUP210|23225|nucleoporin 210kDa##NM_024923|NUP210|23225|nucleoporin 210kDa	0.997474	CTCF.p2:-8:0.997
chr11	60253486	60253648	reg1000983.p1	17.061	+	NM_021950 NM_152866 AK225630 AK292168 AK300025 AK310118 BC002807 X07203 X12530	-30254	+	BC029884 NM_023945 AF237907 AF321127 AB013103	-56489	+	NM_001079692 NM_032597	-90081	+	AK000224 AK309275 NM_001164470 NM_017716 BC029793	6689	+	AY324188 AY324189 AY324190 NM_001012417 NM_001100909 BC140799 BC171746	29381	+	AF237905 NM_031457 AK310969 AK310884 AK315901 BC022895 AK308413 AF350504 AK310872	213565	+	NM_021950|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##NM_152866|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK225630|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK292168|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK300025|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK310118|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##BC002807|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##X07203|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##X12530|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##BC029884|MS4A5|64232|membrane-spanning 4-domains, subfamily A, member 5##NM_023945|MS4A5|64232|membrane-spanning 4-domains, subfamily A, member 5##AF237907|MS4A5|64232|membrane-spanning 4-domains, subfamily A, member 5##AF321127|MS4A5|64232|membrane-spanning 4-domains, subfamily A, member 5##AB013103|MS4A5|64232|membrane-spanning 4-domains, subfamily A, member 5##NM_001079692|MS4A14|84689|membrane-spanning 4-domains, subfamily A, member 14##NM_032597|MS4A14|84689|membrane-spanning 4-domains, subfamily A, member 14##AK000224|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_001164470|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_017716|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##BC029793|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##AY324188|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324189|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324190|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001012417|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001100909|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC140799|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC171746|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AF237905|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_031457|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310969|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310884|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK315901|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##BC022895|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK308413|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AF350504|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310872|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B	0.069493	
chr1	237708	237821	reg1001022.p1	17.061	+	NM_001005484	-168674	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-208359	-	None	None	None	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	129884	+	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	384278	-	TSC_hg19_v1_chr1_-_714015 BC006361	476253	-	NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene	0.841993	CTCF.p2:-5:0.814
chr18	49194642	49194770	reg1000578.p2	17.060	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-470666	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-470994	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-471480	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	671835	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	672407	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2496286	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.982771	CTCF.p2:-27:0.983
chr19	49895265	49895392	reg1001121.p1	17.059	+	NM_144688 TSC_hg19_v1_chr19_+_49891539 AK057220 AK097696 BC029811	-3812	+	NM_001197302 AY358922 NM_001197301 NM_014419 BC030581 AF177398	-28232	+	AL832240 BC051301 TSC_hg19_v1_chr19_-_49865672 AK300241 AK290736 BC007556 NM_003598	-29653	-	AY048588 BC093995 BC093997 AY037555 NM_178449	31319	-	NM_001195256	34359	+	AK294226 AB032436 TSC_hg19_v1_chr19_-_49944785 BC059379 NM_020309	49418	-	NM_144688|CCDC155|147872|coiled-coil domain containing 155##AK057220|CCDC155|147872|coiled-coil domain containing 155##AK097696|CCDC155|147872|coiled-coil domain containing 155##BC029811|CCDC155|147872|coiled-coil domain containing 155##NM_001197302|DKKL1|27120|dickkopf-like 1##AY358922|DKKL1|27120|dickkopf-like 1##NM_001197301|DKKL1|27120|dickkopf-like 1##NM_014419|DKKL1|27120|dickkopf-like 1##BC030581|DKKL1|27120|dickkopf-like 1##AF177398|DKKL1|27120|dickkopf-like 1##AL832240|TEAD2|8463|TEA domain family member 2##BC051301|TEAD2|8463|TEA domain family member 2##AK300241|TEAD2|8463|TEA domain family member 2##AK290736|TEAD2|8463|TEA domain family member 2##BC007556|TEAD2|8463|TEA domain family member 2##NM_003598|TEAD2|8463|TEA domain family member 2##AY048588|PTH2|113091|parathyroid hormone 2##BC093995|PTH2|113091|parathyroid hormone 2##BC093997|PTH2|113091|parathyroid hormone 2##AY037555|PTH2|113091|parathyroid hormone 2##NM_178449|PTH2|113091|parathyroid hormone 2##NM_001195256|LOC100507003|100507003|uncharacterized LOC100507003##AK294226|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##AB032436|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##BC059379|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##NM_020309|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7	0.748644	CTCF.p2:-4:0.749
chr13	53542371	53542480	reg1000691.p1	17.056	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	-119650	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-228463	-	AB006000 CR541910 TSC_hg19_v1_chr13_-_53313891	-228561	-	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	60487	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	4172691	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	4179261	+	AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AB006000|LECT1|11061|leukocyte cell derived chemotaxin 1##CR541910|LECT1|11061|leukocyte cell derived chemotaxin 1##AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	1.861543	CTCF.p2:10:0.987	CTCF.p2:-24:0.875
chr19	11404552	11404673	reg1000429.p1	17.056	+	AB384597 TSC_hg19_v1_chr19_-_11373144 AB037816 BC146786 BC095483 NM_020812	-31474	-	TSC_hg19_v1_chr19_+_11350294 NM_018687 AY358356	-54316	+	TSC_hg19_v1_chr19_-_11308465 AK000011 AK225038	-96150	-	AF133424 NM_012466 BC029908	2221	+	AF081353 TSC_hg19_v1_chr19_-_11450305 BC016471 AK313538 NM_004283	45688	-	BC008365 BC091472 AY358949 TSC_hg19_v1_chr19_-_11456946 AK291979 NM_001145416 NM_033408 NM_198536	52321	-	AB037816|DOCK6|57572|dedicator of cytokinesis 6##BC146786|DOCK6|57572|dedicator of cytokinesis 6##BC095483|DOCK6|57572|dedicator of cytokinesis 6##NM_020812|DOCK6|57572|dedicator of cytokinesis 6##NM_018687|C19orf80|55908|chromosome 19 open reading frame 80##AY358356|C19orf80|55908|chromosome 19 open reading frame 80##AK000011|KANK2|25959|KN motif and ankyrin repeat domains 2##AK225038|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_012466|TSPAN16|26526|tetraspanin 16##BC029908|TSPAN16|26526|tetraspanin 16##AF081353|RAB3D|9545|RAB3D, member RAS oncogene family##BC016471|RAB3D|9545|RAB3D, member RAS oncogene family##AK313538|RAB3D|9545|RAB3D, member RAS oncogene family##NM_004283|RAB3D|9545|RAB3D, member RAS oncogene family##BC008365|TMEM205|374882|transmembrane protein 205##BC091472|TMEM205|374882|transmembrane protein 205##AY358949|TMEM205|374882|transmembrane protein 205##AK291979|TMEM205|374882|transmembrane protein 205##NM_001145416|TMEM205|374882|transmembrane protein 205##NM_033408|TMEM205|374882|transmembrane protein 205##NM_198536|TMEM205|374882|transmembrane protein 205	0.0	
chr17	2916386	2916491	reg1000209.p1	17.052	+	AJ628446 AJ628447 NM_001100398 NM_015085 TSC_hg19_v1_chr17_+_2699761 CR627427 BC140870 BC140871	-216685	+	AK124640 TSC_hg19_v1_chr17_+_2680496	-236015	+	NM_015229 TSC_hg19_v1_chr17_-_2615039	-301451	-	BC106876 NM_014566 AB529301	50489	-	AB529300 BC069552 BC106735 BC106736 NM_002548	79851	-	BC069379 NM_003555 BC095520 AB529303	114463	-	AJ628446|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AJ628447|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_001100398|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015085|RAP1GAP2|23108|RAP1 GTPase activating protein 2##CR627427|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140870|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140871|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AK124640|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015229|KIAA0664|23277|KIAA0664##BC106876|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##NM_014566|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1##NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1##BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	0.375432	CTCF.p2:12:0.375
chr17	45307244	45307379	reg1000878.p1	17.052	+	NM_002476 TSC_hg19_v1_chr17_+_45286713 BC030228 M24121 M36172 X13955 AB528188 AM392523 AM392536 AM392902 AM393643 AM393677	-20561	+	NM_001002841 X52005	-20861	+	NM_001114091 NM_001256 TSC_hg19_v1_chr17_-_45266669	-40627	-	TSC_hg19_v1_chr17_+_45331192 BC127666 BC127667 J02703 NM_000212 M35999 M20311	23873	+	AY826979 TSC_hg19_v1_chr17_+_45331224 AB587392 U95204	23913	+	TSC_hg19_v1_chr17_+_45331260 AK300424	23947	+	NM_002476|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##BC030228|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##M24121|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##M36172|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##X13955|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##AM392523|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##AM392536|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##AM392902|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##AM393643|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##AM393677|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##NM_001002841|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##X52005|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##NM_001114091|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##NM_001256|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##BC127666|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127667|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##J02703|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##NM_000212|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M35999|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M20311|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##AY826979|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##U95204|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)	0.058052	
chr22	29225465	29225604	reg1000965.p1	17.052	+	TSC_hg19_v1_chr22_+_29196668 AF086143	-28851	+	TSC_hg19_v1_chr22_-_29196555 BC012841 AK292188 AK313761 NM_001079539 NM_005080	-28967	-	BC015709 TSC_hg19_v1_chr22_-_29196526 AB463352 AM393640 CU013207 CU013495 DQ890989 DQ894165 CU674466 CR456611 AB076383 AB076384 BC000938 M31627	-29043	-	TSC_hg19_v1_chr22_+_29279579 NM_001206998 AB051436 CR456397	54243	+	AK096397 NM_032173	87842	+	TSC_hg19_v1_chr22_+_29449893 BC042614	224391	+	BC012841|XBP1|7494|X-box binding protein 1##AK292188|XBP1|7494|X-box binding protein 1##AK313761|XBP1|7494|X-box binding protein 1##NM_001079539|XBP1|7494|X-box binding protein 1##NM_005080|XBP1|7494|X-box binding protein 1##BC015709|XBP1|7494|X-box binding protein 1##AM393640|XBP1|7494|X-box binding protein 1##CU013207|XBP1|7494|X-box binding protein 1##CU013495|XBP1|7494|X-box binding protein 1##DQ890989|XBP1|7494|X-box binding protein 1##DQ894165|XBP1|7494|X-box binding protein 1##CR456611|XBP1|7494|X-box binding protein 1##AB076383|XBP1|7494|X-box binding protein 1##AB076384|XBP1|7494|X-box binding protein 1##BC000938|XBP1|7494|X-box binding protein 1##M31627|XBP1|7494|X-box binding protein 1##NM_001206998|ZNRF3|84133|zinc and ring finger 3##AB051436|ZNRF3|84133|zinc and ring finger 3##CR456397|ZNRF3|84133|zinc and ring finger 3##AK096397|ZNRF3|84133|zinc and ring finger 3##NM_032173|ZNRF3|84133|zinc and ring finger 3##BC042614|ZNRF3|84133|zinc and ring finger 3	0.974273	CTCF.p2:18:0.974
chr17	5610303	5610412	reg1000742.p1	17.050	+	AF298548 TSC_hg19_v1_chr17_-_5487785 AF310105 AB023143 BC028066 BC051787 AK310936 NM_001033053 NM_014922 NM_033004 NM_033006 NM_033007	-122558	-	AF217966 AF131825 NM_001162371 TSC_hg19_v1_chr17_-_5404327	-206041	-	AK289939 AL136906 NM_024039	-220128	+	AK309645 TSC_hg19_v1_chr17_+_5972435 AK289603	362073	+	TSC_hg19_v1_chr17_+_5973700 AL833730 NM_015253	363450	+	TSC_hg19_v1_chr17_+_5974408 BC009975	364060	+	AF298548|NLRP1|22861|NLR family, pyrin domain containing 1##AF310105|NLRP1|22861|NLR family, pyrin domain containing 1##AB023143|NLRP1|22861|NLR family, pyrin domain containing 1##AK310936|NLRP1|22861|NLR family, pyrin domain containing 1##NM_001033053|NLRP1|22861|NLR family, pyrin domain containing 1##NM_014922|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033004|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033006|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033007|NLRP1|22861|NLR family, pyrin domain containing 1##AF217966|LOC728392|728392|uncharacterized LOC728392##AF131825|LOC728392|728392|uncharacterized LOC728392##NM_001162371|LOC728392|728392|uncharacterized LOC728392##AK289939|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AL136906|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##NM_024039|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AK309645|WSCD1|23302|WSC domain containing 1##AK289603|WSCD1|23302|WSC domain containing 1##AL833730|WSCD1|23302|WSC domain containing 1##NM_015253|WSCD1|23302|WSC domain containing 1##BC009975|WSCD1|23302|WSC domain containing 1	0.776704	CTCF.p2:0:0.777
chr16	15313898	15314034	reg1001062.p1	17.045	+	AB527833 AK300253 HQ258337 BC036182 AK314769 AK316520 BC132688 BC132690 BC104660 AJ272050 AF227156 NM_018427 AK225662	-125838	-	CU675948 AF092440 BC017336 NM_173474 AK300557 TSC_hg19_v1_chr16_-_15149897	-164089	-	AY203955 TSC_hg19_v1_chr16_+_15069016 DQ111782	-244934	+	TSC_hg19_v1_chr16_+_15489610 DQ004255 DQ004256 NM_001128423 NM_173803	175635	+	TSC_hg19_v1_chr16_+_15489637 AK096918 AK293380 BC061514	175684	+	AK057180 NM_033201 TSC_hg19_v1_chr16_+_15528363 AK293431 BC008967	214434	+	AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##HQ258337|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AF092440|NTAN1|123803|N-terminal asparagine amidase##BC017336|NTAN1|123803|N-terminal asparagine amidase##NM_173474|NTAN1|123803|N-terminal asparagine amidase##AK300557|NTAN1|123803|N-terminal asparagine amidase##AY203955|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##DQ111782|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##DQ004255|MPV17L|255027|MPV17 mitochondrial membrane protein-like##DQ004256|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_001128423|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_173803|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK096918|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK293380|MPV17L|255027|MPV17 mitochondrial membrane protein-like##BC061514|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK057180|C16orf45|89927|chromosome 16 open reading frame 45##NM_033201|C16orf45|89927|chromosome 16 open reading frame 45##AK293431|C16orf45|89927|chromosome 16 open reading frame 45##BC008967|C16orf45|89927|chromosome 16 open reading frame 45	0.050849	
chr17	46151816	46151943	reg1001113.p1	17.045	+	BX647976 TSC_hg19_v1_chr17_+_46126143	-25738	+	TSC_hg19_v1_chr17_+_46125725 X77366	-26127	+	AL833530 TSC_hg19_v1_chr17_+_46125724	-26155	+	NM_006807 TSC_hg19_v1_chr17_-_46178605	26704	-	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	26942	-	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	33106	+	BX647976|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##X77366|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##NM_006807|CBX1|10951|chromobox homolog 1##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11	0.990129	CTCF.p2:8:0.990
chr19	10360875	10360995	reg1000775.p1	17.044	+	NM_004230 TSC_hg19_v1_chr19_-_10342058	-18929	-	TSC_hg19_v1_chr19_-_10305646 BC126227 BC144093 NM_001130823 NM_001379 AF180682 X63692	-55208	-	TSC_hg19_v1_chr19_-_10305600 BC092517	-55330	-	TSC_hg19_v1_chr19_+_10362680 NM_015956 NM_146387 NM_146388 AF132962 BC000756	1712	+	TSC_hg19_v1_chr19_+_10362889 BC009858	1963	+	TSC_hg19_v1_chr19_+_10362916 AB049635 AY007152	2057	+	NM_004230|S1PR2|9294|sphingosine-1-phosphate receptor 2##BC126227|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC144093|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001130823|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001379|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##AF180682|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##X63692|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC092517|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_015956|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146387|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146388|MRPL4|51073|mitochondrial ribosomal protein L4##AF132962|MRPL4|51073|mitochondrial ribosomal protein L4##BC000756|MRPL4|51073|mitochondrial ribosomal protein L4##BC009858|MRPL4|51073|mitochondrial ribosomal protein L4##AB049635|MRPL4|51073|mitochondrial ribosomal protein L4##AY007152|MRPL4|51073|mitochondrial ribosomal protein L4	1.040966	CTCF.p2:31:0.996
chr6	154996847	154996993	reg1000713.p1	17.041	+	D28359 TSC_hg19_v1_chr6_+_154897429	-99490	+	TSC_hg19_v1_chr6_-_154831788 AK055911	-165118	-	TSC_hg19_v1_chr6_-_154831721 AY328891 AY328892 AY328893 NM_173515	-165185	-	BC070071 NM_014892 TSC_hg19_v1_chr6_+_155054540 AK302969	57605	+	AK295651 AK303001 AK307815 TSC_hg19_v1_chr6_+_155054549 BC032728	57634	+	TSC_hg19_v1_chr6_+_155054812 AB029039	57905	+	AK055911|CNKSR3|154043|CNKSR family member 3##AY328891|CNKSR3|154043|CNKSR family member 3##AY328892|CNKSR3|154043|CNKSR family member 3##AY328893|CNKSR3|154043|CNKSR family member 3##NM_173515|CNKSR3|154043|CNKSR family member 3##BC070071|SCAF8|22828|SR-related CTD-associated factor 8##NM_014892|SCAF8|22828|SR-related CTD-associated factor 8##AK302969|SCAF8|22828|SR-related CTD-associated factor 8##AK295651|SCAF8|22828|SR-related CTD-associated factor 8##AK303001|SCAF8|22828|SR-related CTD-associated factor 8##AK307815|SCAF8|22828|SR-related CTD-associated factor 8##BC032728|SCAF8|22828|SR-related CTD-associated factor 8##AB029039|SCAF8|22828|SR-related CTD-associated factor 8	1.030239	CTCF.p2:20:0.998
chr2	113384219	113384346	reg1000643.p1	17.039	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-42093	+	TSC_hg19_v1_chr2_+_113342023 AK024631 BC004498 NM_032309 AK312219	-42244	+	BX647360 BC110833 BC150139 AK294027 TSC_hg19_v1_chr2_+_113300041 AK001678 AK301178 AK022533 BX647683	-84363	+	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	19238	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	137940	-	NM_000575 BC035169	158690	-	AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BC004498|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_032309|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK312219|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BX647360|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BC110833|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BC150139|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK294027|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK001678|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK301178|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK022533|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BX647683|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha	1.049268	CTCF.p2:-1:0.997
chr17	43296389	43296532	reg1000721.p1	17.037	+	AK056946 NM_144608	-58197	+	TSC_hg19_v1_chr17_+_43225936 BC006460	-70525	+	TSC_hg19_v1_chr17_+_43225841 AK023624 AB021179	-70609	+	TSC_hg19_v1_chr17_+_43299284 AY278319 NM_005892 BC111564	2900	+	AK096807 TSC_hg19_v1_chr17_-_43319268	22736	-	TSC_hg19_v1_chr17_+_43325300 AK311429	28844	+	AK056946|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##NM_144608|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##BC006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK023624|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AB021179|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AY278319|FMNL1|752|formin-like 1##NM_005892|FMNL1|752|formin-like 1##BC111564|FMNL1|752|formin-like 1##AK311429|LOC100133991|100133991|uncharacterized LOC100133991	0.998981	CTCF.p2:-13:0.999
chr13	27933466	27933579	reg1000694.p2	17.036	+	TSC_hg19_v1_chr13_+_27844966 HQ258126	-88515	+	AY439004 NM_206827	-89059	+	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	-107780	+	BC143711 D32257 NM_002097 TSC_hg19_v1_chr13_+_27998761 AB590496 U14134 U20272	65249	+	TSC_hg19_v1_chr13_-_28024327 BC039599 NM_001166262 NM_001166261	90787	-	AF265440 TSC_hg19_v1_chr13_-_28024702 BC046166 NM_001166263 NM_152912	91200	-	HQ258126|RASL11A|387496|RAS-like, family 11, member A##AY439004|RASL11A|387496|RAS-like, family 11, member A##NM_206827|RASL11A|387496|RAS-like, family 11, member A##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21##BC143711|GTF3A|2971|general transcription factor IIIA##D32257|GTF3A|2971|general transcription factor IIIA##NM_002097|GTF3A|2971|general transcription factor IIIA##U14134|GTF3A|2971|general transcription factor IIIA##U20272|GTF3A|2971|general transcription factor IIIA##BC039599|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166262|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166261|MTIF3|219402|mitochondrial translational initiation factor 3##BC046166|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166263|MTIF3|219402|mitochondrial translational initiation factor 3##NM_152912|MTIF3|219402|mitochondrial translational initiation factor 3	0.749955	CTCF.p2:10:0.750
chr12	78319423	78319553	reg1000406.p1	17.034	+	NM_014903 AJ488201	-94356	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-860199	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-1046705	-	AK094616 NM_001135805	938284	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	938987	+	TSC_hg19_v1_chr12_+_79258517 BX647240	939048	+	NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I##BX647240|SYT1|6857|synaptotagmin I	0.0	
chr22	21889059	21889169	reg1000918.p1	17.031	+	NM_001207052	-67656	+	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	-117438	+	NM_001128635	-151075	+	NM_001128635	16258	-	NM_001128633	16635	-	NM_003347 TSC_hg19_v1_chr22_+_21922000	32865	+	NM_001207052|TMEM191C|645426|transmembrane protein 191C##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_003347|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3	0.997382	CTCF.p2:1:0.997
chr2	97175237	97175370	reg1000699.p1	17.030	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-173767	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-173827	+	NM_178495 NM_001163524 BC034503	-183355	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	27182	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	128716	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	128764	-	BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_178495|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163524|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC034503|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.992671	CTCF.p2:7:0.993
chr1	23866400	23866550	reg1001120.p1	17.029	+	L22846 NM_004091	-8764	-	BT019523 AB463593 BC053676 AK313939 TSC_hg19_v1_chr1_-_23857464	-9100	-	TSC_hg19_v1_chr1_-_23810732 NM_001143778 NM_017707	-55738	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	19509	-	NM_002167 X69111	19809	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	151805	+	L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##BT019523|E2F2|1870|E2F transcription factor 2##BC053676|E2F2|1870|E2F transcription factor 2##AK313939|E2F2|1870|E2F transcription factor 2##NM_001143778|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##NM_017707|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11	0.992132	CTCF.p2:13:0.992
chr7	139330801	139330912	reg1000701.p2	17.029	+	NM_001080511	-122183	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-162424	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-285842	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	147049	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	147183	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	198236	+	NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.996568	CTCF.p2:-6:0.997
chr7	44961841	44961949	reg1000811.p1	17.029	+	AB464680 TSC_hg19_v1_chr7_-_44924953 AY039216 NM_033224 BC101735 BC101737	-36926	-	TSC_hg19_v1_chr7_-_44887698 NM_012412 NM_138635 NM_201436 NM_201516 NM_201517	-74169	-	TSC_hg19_v1_chr7_-_44887667 AK023973	-74226	-	AB463131 TSC_hg19_v1_chr7_-_45018615 AK074050	56692	-	BC113544 BC117241 TSC_hg19_v1_chr7_-_45018675 AB290179 AL832302	56767	-	BC063854 TSC_hg19_v1_chr7_-_45018705 AK097912 NM_033054	56802	-	AY039216|PURB|5814|purine-rich element binding protein B##NM_033224|PURB|5814|purine-rich element binding protein B##BC101735|PURB|5814|purine-rich element binding protein B##BC101737|PURB|5814|purine-rich element binding protein B##NM_012412|H2AFV|94239|H2A histone family, member V##NM_138635|H2AFV|94239|H2A histone family, member V##NM_201436|H2AFV|94239|H2A histone family, member V##NM_201516|H2AFV|94239|H2A histone family, member V##NM_201517|H2AFV|94239|H2A histone family, member V##AK023973|H2AFV|94239|H2A histone family, member V##AK074050|MYO1G|64005|myosin IG##BC113544|MYO1G|64005|myosin IG##BC117241|MYO1G|64005|myosin IG##AB290179|MYO1G|64005|myosin IG##AL832302|MYO1G|64005|myosin IG##BC063854|MYO1G|64005|myosin IG##AK097912|MYO1G|64005|myosin IG##NM_033054|MYO1G|64005|myosin IG	0.999636	CTCF.p2:-7:1.000
chr5	10452943	10453074	reg1000663.p1	17.024	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-10856	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-11005	+	TSC_hg19_v1_chr5_+_10354003 AB385356	-99000	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	111434	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	308251	-	TSC_hg19_v1_chr5_-_10761341 BC002726	308334	-	AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein	0.345272	CTCF.p2:-10:0.345
chr16	56901297	56901420	reg1000754.p1	17.021	+	AK315298 NM_000339 NM_001126107 NM_001126108 AK223133 X91220 U44128 AB463268	-2226	+	AK294176 NM_001242796	-83969	+	NM_001242795 AK056637 TSC_hg19_v1_chr16_+_56815740	-85623	+	NM_001010989 NM_001010990 NM_014685	64389	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	64783	+	M30185 AK297699 NM_000078 TSC_hg19_v1_chr16_+_56995861 AK291586 BC025739 EU176529 CU693046 BT020064 M83573	94479	+	AK315298|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_000339|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126107|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126108|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK223133|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##X91220|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##U44128|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK294176|NUP93|9688|nucleoporin 93kDa##NM_001242796|NUP93|9688|nucleoporin 93kDa##NM_001242795|NUP93|9688|nucleoporin 93kDa##AK056637|NUP93|9688|nucleoporin 93kDa##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##M30185|CETP|1071|cholesteryl ester transfer protein, plasma##AK297699|CETP|1071|cholesteryl ester transfer protein, plasma##NM_000078|CETP|1071|cholesteryl ester transfer protein, plasma##AK291586|CETP|1071|cholesteryl ester transfer protein, plasma##BC025739|CETP|1071|cholesteryl ester transfer protein, plasma##EU176529|CETP|1071|cholesteryl ester transfer protein, plasma##BT020064|CETP|1071|cholesteryl ester transfer protein, plasma##M83573|CETP|1071|cholesteryl ester transfer protein, plasma	0.971104	CTCF.p2:-19:0.971
chr19	36373154	36373270	reg1000825.p1	17.021	+	TSC_hg19_v1_chr19_+_36359436 NM_001024807 NM_005166 BC013850 AK092376 BC012889 AK312292 BC032983 U48437 AB527091 CU680434 DQ891341 DQ894523	-13748	+	BC007312 NM_032123 NM_199179 NM_199180 AY358742 AL136654 AB593116	-25385	+	NM_004646	-30318	-	TSC_hg19_v1_chr19_-_36391448 AF385434 NM_139239	18287	-	AL050163 BC046348 NM_001007469 NM_014266 TSC_hg19_v1_chr19_+_36393430 BC065224 BC035931 AF072844 AF122904 AY359058 AF285447 AB590940	20225	+	TSC_hg19_v1_chr19_-_36399181 BT009851 CR450342 CR542202 AB590208 AY074782 CU679890 DQ891092 DQ894274 AJ010098	25938	-	NM_001024807|APLP1|333|amyloid beta (A4) precursor-like protein 1##NM_005166|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC013850|APLP1|333|amyloid beta (A4) precursor-like protein 1##AK092376|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC012889|APLP1|333|amyloid beta (A4) precursor-like protein 1##AK312292|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC032983|APLP1|333|amyloid beta (A4) precursor-like protein 1##U48437|APLP1|333|amyloid beta (A4) precursor-like protein 1##DQ891341|APLP1|333|amyloid beta (A4) precursor-like protein 1##DQ894523|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC007312|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##NM_032123|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##NM_199179|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##NM_199180|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##AY358742|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##AL136654|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##AB593116|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##NM_004646|NPHS1|4868|nephrosis 1, congenital, Finnish type (nephrin)##AF385434|NFKBID|84807|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta##NM_139239|NFKBID|84807|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta##AL050163|HCST|10870|hematopoietic cell signal transducer##BC046348|HCST|10870|hematopoietic cell signal transducer##NM_001007469|HCST|10870|hematopoietic cell signal transducer##NM_014266|HCST|10870|hematopoietic cell signal transducer##BC065224|HCST|10870|hematopoietic cell signal transducer##BC035931|HCST|10870|hematopoietic cell signal transducer##AF072844|HCST|10870|hematopoietic cell signal transducer##AF122904|HCST|10870|hematopoietic cell signal transducer##AY359058|HCST|10870|hematopoietic cell signal transducer##AF285447|HCST|10870|hematopoietic cell signal transducer##BT009851|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR450342|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR542202|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AY074782|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ891092|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ894274|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AJ010098|TYROBP|7305|TYRO protein tyrosine kinase binding protein	0.976713	CTCF.p2:-32:0.977
chr19	41955382	41955519	reg1001237.p1	17.021	+	NM_001130514	-6388	+	TSC_hg19_v1_chr19_-_41945831 AK298197 NM_001167869 NM_001167870 NM_001167871 NM_018035	-9617	-	TSC_hg19_v1_chr19_-_41945814 BC013323 AK316313	-9636	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	127127	+	D90276 AK298701 NM_001817	177984	-	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	236702	-	NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##AK298197|ATP5SL|55101|ATP5S-like##NM_001167869|ATP5SL|55101|ATP5S-like##NM_001167870|ATP5SL|55101|ATP5S-like##NM_001167871|ATP5SL|55101|ATP5S-like##NM_018035|ATP5SL|55101|ATP5S-like##BC013323|ATP5SL|55101|ATP5S-like##AK316313|ATP5SL|55101|ATP5S-like##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7	1.024946	CTCF.p2:-11:1.000
chr20	48687913	48688047	reg1000944.p1	17.021	+	TSC_hg19_v1_chr20_+_48599515 NM_005985 AK313228 BC012910 AF125377 DQ891599 DQ894793 AB464226 AF131208 CU680444	-88427	+	BX640603 TSC_hg19_v1_chr20_+_48552935 BC066919 AF265215 AK301731 BC013695 AB587558 BT006795	-135037	+	TSC_hg19_v1_chr20_+_48552933 AK315638	-135049	+	BT007382 CU674232 HQ448675 TSC_hg19_v1_chr20_-_48729684 BC000468 BX647511 BX648147 NM_001032288	41710	-	TSC_hg19_v1_chr20_-_48732483 AK314754 NM_022442 BC005215 NM_021988 NM_199144	44508	-	TSC_hg19_v1_chr20_-_48770209 BC140089 BC143091 AB587452	82210	-	NM_005985|SNAI1|6615|snail homolog 1 (Drosophila)##AK313228|SNAI1|6615|snail homolog 1 (Drosophila)##BC012910|SNAI1|6615|snail homolog 1 (Drosophila)##AF125377|SNAI1|6615|snail homolog 1 (Drosophila)##DQ891599|SNAI1|6615|snail homolog 1 (Drosophila)##DQ894793|SNAI1|6615|snail homolog 1 (Drosophila)##AF131208|SNAI1|6615|snail homolog 1 (Drosophila)##BX640603|RNF114|55905|ring finger protein 114##BC066919|RNF114|55905|ring finger protein 114##AF265215|RNF114|55905|ring finger protein 114##AK301731|RNF114|55905|ring finger protein 114##BC013695|RNF114|55905|ring finger protein 114##BT006795|RNF114|55905|ring finger protein 114##AK315638|RNF114|55905|ring finger protein 114##BT007382|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##HQ448675|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BC000468|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BX647511|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BX648147|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_001032288|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##AK314754|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_022442|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BC005215|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_021988|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_199144|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BC140089|TMEM189|387521|transmembrane protein 189##BC143091|TMEM189|387521|transmembrane protein 189	0.99995	CTCF.p2:5:1.000
chr12	3384733	3384840	reg1000666.p2	17.020	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-198224	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-315725	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-316192	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	215655	+	AK125333 TSC_hg19_v1_chr12_-_3601984	217199	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	477482	-	NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B	0.99965	CTCF.p2:7:1.000
chr17	75396784	75396912	reg1000635.p2	17.019	+	AB023208 NM_001113494 AJ312322	-24679	+	TSC_hg19_v1_chr17_+_75369418 AK304143	-27423	+	TSC_hg19_v1_chr17_+_75369236 AJ312319 NM_001113493	-27595	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	49797	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	49934	+	AK299828 TSC_hg19_v1_chr17_+_75447450	50541	+	AB023208|SEPT9|10801|septin 9##NM_001113494|SEPT9|10801|septin 9##AJ312322|SEPT9|10801|septin 9##AK304143|SEPT9|10801|septin 9##AJ312319|SEPT9|10801|septin 9##NM_001113493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9	0.0	
chr19	49298495	49298649	reg1000755.p1	17.016	+	AY359086 NM_019113 AB021975 AB590410 DQ891786 DQ894970	-39154	+	D87935 D87936 D87937 NM_000148	-39926	-	AB195682 BC034769 NM_182575 AK301750	-48477	-	AK310243 U68418 CU674922 DQ892350 DQ895554 AF268047 AF268048 TSC_hg19_v1_chr19_-_49314287 BC001900 AK093627 AK309428 AK223522 AK310101 AK314548 NM_001164773 NM_001190	15676	-	AB528622 CU675337 TSC_hg19_v1_chr19_-_49339769 BC006283 BC006294 AK307437 AF126781	41202	-	TSC_hg19_v1_chr19_-_49339923 NM_016246	41351	-	AY359086|FGF21|26291|fibroblast growth factor 21##NM_019113|FGF21|26291|fibroblast growth factor 21##AB021975|FGF21|26291|fibroblast growth factor 21##DQ891786|FGF21|26291|fibroblast growth factor 21##DQ894970|FGF21|26291|fibroblast growth factor 21##D87935|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##D87936|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##D87937|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##NM_000148|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##AB195682|IZUMO1|284359|izumo sperm-egg fusion 1##BC034769|IZUMO1|284359|izumo sperm-egg fusion 1##NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1##AK301750|IZUMO1|284359|izumo sperm-egg fusion 1##AK310243|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##U68418|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##DQ892350|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##DQ895554|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AF268047|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AF268048|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##BC001900|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK093627|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK309428|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK223522|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK310101|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK314548|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##NM_001164773|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##NM_001190|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##BC006283|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##BC006294|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AK307437|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AF126781|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##NM_016246|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14	0.924223	CTCF.p2:-24:0.924
chr9	127474319	127474459	reg1000431.p2	17.016	+	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	-53685	+	TSC_hg19_v1_chr9_-_127269711 BC032501 NM_004959	-204685	-	AY278562 NM_001161808	-260967	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	59121	-	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	65111	+	BC150645 BC171828 BC171830 BC171837 BC127949 TSC_hg19_v1_chr9_+_127615749 NM_001045476	141335	+	AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144##HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A##BC150645|WDR38|401551|WD repeat domain 38##BC171828|WDR38|401551|WD repeat domain 38##BC171830|WDR38|401551|WD repeat domain 38##BC171837|WDR38|401551|WD repeat domain 38##BC127949|WDR38|401551|WD repeat domain 38##NM_001045476|WDR38|401551|WD repeat domain 38	1.028943	CTCF.p2:-23:0.758	CTCF.p2:51:0.270
chr7	98439518	98439616	reg1000394.p2	17.013	+	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	-192831	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-409134	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-409273	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	27963	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	28060	-	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	28109	-	NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130	0.999675	CTCF.p2:0:1.000
chr7	86444436	86444591	reg1001143.p1	17.012	+	X77748 TSC_hg19_v1_chr7_+_86274130 DQ315361 DQ315362 DQ315363	-170397	+	AK294701 TSC_hg19_v1_chr7_+_86274004 BC022496	-170522	+	AK291406 TSC_hg19_v1_chr7_+_86273870	-170642	+	AK296250 NM_152748	150733	-	TSC_hg19_v1_chr7_-_86688965 NM_001142749	244465	-	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	337200	+	X77748|GRM3|2913|glutamate receptor, metabotropic 3##DQ315361|GRM3|2913|glutamate receptor, metabotropic 3##DQ315362|GRM3|2913|glutamate receptor, metabotropic 3##DQ315363|GRM3|2913|glutamate receptor, metabotropic 3##AK294701|GRM3|2913|glutamate receptor, metabotropic 3##BC022496|GRM3|2913|glutamate receptor, metabotropic 3##AK291406|GRM3|2913|glutamate receptor, metabotropic 3##AK296250|KIAA1324L|222223|KIAA1324-like##NM_152748|KIAA1324L|222223|KIAA1324-like##NM_001142749|KIAA1324L|222223|KIAA1324-like##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1	0.729174	CTCF.p2:2:0.729
chr11	111293817	111293965	reg1000676.p1	17.004	+	NM_006235	-43735	-	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	-43939	-	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	-123858	+	BC031045 NM_017589	89179	-	AK128145 NM_001100388 NM_207430 BC039505	91631	+	AK055539 NM_178834	117341	+	NM_006235|POU2AF1|5450|POU class 2 associating factor 1##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##BC031045|BTG4|54766|B-cell translocation gene 4##NM_017589|BTG4|54766|B-cell translocation gene 4##AK128145|C11orf88|399949|chromosome 11 open reading frame 88##NM_001100388|C11orf88|399949|chromosome 11 open reading frame 88##NM_207430|C11orf88|399949|chromosome 11 open reading frame 88##BC039505|C11orf88|399949|chromosome 11 open reading frame 88##AK055539|LAYN|143903|layilin##NM_178834|LAYN|143903|layilin	0.298181	CTCF.p2:39:0.298
chr14	100574771	100574895	reg1001065.p1	16.999	+	AF131766 TSC_hg19_v1_chr14_+_100563847	-11000	+	TSC_hg19_v1_chr14_+_100531768 AF087843 BC032358 AF052504	-43038	+	TSC_hg19_v1_chr14_+_100531758 NM_016337 AK301379	-43081	+	AY541700 BC063598 TSC_hg19_v1_chr14_-_100626009 NM_206918	51138	-	NM_003403 TSC_hg19_v1_chr14_+_100705177	130309	+	TSC_hg19_v1_chr14_+_100705309 M77698	130479	+	AF131766|EVL|51466|Enah/Vasp-like##AF087843|EVL|51466|Enah/Vasp-like##BC032358|EVL|51466|Enah/Vasp-like##AF052504|EVL|51466|Enah/Vasp-like##NM_016337|EVL|51466|Enah/Vasp-like##AK301379|EVL|51466|Enah/Vasp-like##AY541700|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##BC063598|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##NM_206918|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##NM_003403|YY1|7528|YY1 transcription factor##M77698|YY1|7528|YY1 transcription factor	0.990642	CTCF.p2:0:0.991
chr20	24899069	24899206	reg1001024.p1	16.997	+	TSC_hg19_v1_chr20_+_24450295 BC030637	-448835	+	AK024282 NM_024893	-449303	+	BC040904 NM_178311	-929722	-	TSC_hg19_v1_chr20_+_24929865 NM_003650	30726	+	TSC_hg19_v1_chr20_+_24929907 AF031824 BC015507 AB015225 CU677327 BT009825 AF036342 CR541860 CR541878	30885	+	TSC_hg19_v1_chr20_-_24973355 CU678464 BC003501	74193	-	BC030637|SYNDIG1|79953|synapse differentiation inducing 1##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1##BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_003650|CST7|8530|cystatin F (leukocystatin)##AF031824|CST7|8530|cystatin F (leukocystatin)##BC015507|CST7|8530|cystatin F (leukocystatin)##AB015225|CST7|8530|cystatin F (leukocystatin)##BT009825|CST7|8530|cystatin F (leukocystatin)##AF036342|CST7|8530|cystatin F (leukocystatin)##CR541860|CST7|8530|cystatin F (leukocystatin)##CR541878|CST7|8530|cystatin F (leukocystatin)##BC003501|C20orf3|57136|chromosome 20 open reading frame 3	0.970969	CTCF.p2:17:0.971
chr3	46120422	46120567	reg1000910.p1	16.996	+	AB189434 AB189435 NM_001024644 NM_005283	-51516	-	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	-83173	-	NM_006564 Y13248	-135522	+	BC064991 TSC_hg19_v1_chr3_-_46249804 L10918 BC051306 NM_001295	129315	-	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	163422	+	AK292685 NM_001123041 NM_001123396	274735	+	AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##BC064991|CCR1|1230|chemokine (C-C motif) receptor 1##L10918|CCR1|1230|chemokine (C-C motif) receptor 1##BC051306|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001295|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2	1.24014	CTCF.p2:-15:1.000	CTCF.p2:45:0.240
chr1	164756662	164756786	reg1001221.p1	16.995	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	-227738	+	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	-228133	+	NM_031423 NM_145697 TSC_hg19_v1_chr1_+_163291746 AK093348 AX748068 AF326731 BC008489 AB050577	-1464948	+	TSC_hg19_v1_chr1_+_164818083 AK022520	61399	+	AK122800 NM_001174069	568751	-	AK127724 NM_177398	569227	-	AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_031423|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_145697|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK093348|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AF326731|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC008489|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AB050577|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha	0.999132	CTCF.p2:11:0.999
chr20	20805750	20805868	reg1001102.p1	16.994	+	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	-112581	-	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	-457055	+	NM_001167816 AL117439	-768489	+	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	300855	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	300918	+	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	478166	+	DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1##BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2	0.999718	CTCF.p2:0:1.000
chr8	125605317	125605436	reg1000618.p1	16.993	+	AF116674 TSC_hg19_v1_chr8_-_125580771	-24615	-	TSC_hg19_v1_chr8_-_125579395 AK126989	-25970	-	NM_005005 AF261090 TSC_hg19_v1_chr8_+_125551363 AF044956 AF067168 AK026538 AL136714 BC007672 AK302286 AK313432 AB463917	-53992	+	TSC_hg19_v1_chr8_-_125716430 U50573	111056	-	EF560715 TSC_hg19_v1_chr8_-_125740463 AK027015	135069	-	TSC_hg19_v1_chr8_-_125740689 AF086645 NM_014751	135347	-	AF116674|MTSS1|9788|metastasis suppressor 1##AK126989|MTSS1|9788|metastasis suppressor 1##NM_005005|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF261090|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF044956|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF067168|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AK026538|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AL136714|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##BC007672|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AK313432|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##U50573|MTSS1|9788|metastasis suppressor 1##EF560715|MTSS1|9788|metastasis suppressor 1##AK027015|MTSS1|9788|metastasis suppressor 1##AF086645|MTSS1|9788|metastasis suppressor 1##NM_014751|MTSS1|9788|metastasis suppressor 1	0.99846	CTCF.p2:-18:0.998
chr1	182570598	182570735	reg1001112.p1	16.991	+	CU675308 TSC_hg19_v1_chr1_+_182569465	-1220	+	AK315231 BC090934 TSC_hg19_v1_chr1_-_182558392 CR627369 NM_021133	-12283	-	NM_001137669 AK302768 BC142944 AL136902	-151393	+	AF493937 BT006638 CU675307 AB528682 U94829 U70426 BC006243 TSC_hg19_v1_chr1_-_182573525 AK301261 AK311880 NM_002928	2804	-	BC069677 BC069718 BC103865 BC103866 BC103867 AF297015 NM_001102450 NM_033345	71375	-	NM_001200050 NM_001200051 NM_001200052 NM_001200056 NM_030769 BC042003	187918	+	AK315231|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##BC090934|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##CR627369|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##NM_021133|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##NM_001137669|RGSL1|353299|regulator of G-protein signaling like 1##AK302768|RGSL1|353299|regulator of G-protein signaling like 1##BC142944|RGSL1|353299|regulator of G-protein signaling like 1##AL136902|RGSL1|353299|regulator of G-protein signaling like 1##AF493937|RGS16|6004|regulator of G-protein signaling 16##BT006638|RGS16|6004|regulator of G-protein signaling 16##U94829|RGS16|6004|regulator of G-protein signaling 16##U70426|RGS16|6004|regulator of G-protein signaling 16##BC006243|RGS16|6004|regulator of G-protein signaling 16##AK301261|RGS16|6004|regulator of G-protein signaling 16##AK311880|RGS16|6004|regulator of G-protein signaling 16##NM_002928|RGS16|6004|regulator of G-protein signaling 16##BC069677|RGS8|85397|regulator of G-protein signaling 8##BC069718|RGS8|85397|regulator of G-protein signaling 8##BC103865|RGS8|85397|regulator of G-protein signaling 8##BC103866|RGS8|85397|regulator of G-protein signaling 8##BC103867|RGS8|85397|regulator of G-protein signaling 8##AF297015|RGS8|85397|regulator of G-protein signaling 8##NM_001102450|RGS8|85397|regulator of G-protein signaling 8##NM_033345|RGS8|85397|regulator of G-protein signaling 8##NM_001200050|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200051|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200052|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200056|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_030769|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC042003|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)	0.9994	CTCF.p2:-21:0.999
chr22	37252499	37252653	reg1001213.p1	16.991	+	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	-37057	-	AL022729 TSC_hg19_v1_chr22_-_37172162 AK307105 AK307382 BC000566 AB209424 NM_001177701 NM_006860	-80421	-	NM_001177702	-88503	-	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	4532	+	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	57082	+	BC042635 CR456416 NM_001163857 NM_178552	151281	-	BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##AL022729|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307105|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307382|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC000566|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AB209424|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177701|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_006860|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177702|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##BC042635|C22orf33|339669|chromosome 22 open reading frame 33##CR456416|C22orf33|339669|chromosome 22 open reading frame 33##NM_001163857|C22orf33|339669|chromosome 22 open reading frame 33##NM_178552|C22orf33|339669|chromosome 22 open reading frame 33	1.963154	CTCF.p2:-16:0.975	CTCF.p2:29:0.988
chr15	34880308	34880428	reg1000434.p1	16.990	+	BX647673 TSC_hg19_v1_chr15_-_34875067	-5299	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_001023567	-52202	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_181077	-198423	-	BC069131 BC069339 NM_020660 BC112110 BC112114 BC143788	166366	-	AK129892 AK056592 AK129902 AK290616 TSC_hg19_v1_chr15_-_35087751 BC009978 NM_005159	207469	-	AB384497 AK291615 BC127111 BC127112 TSC_hg19_v1_chr15_-_35261899 AB011132 AK315815 BX647820 EF553519 NM_014691	381559	-	BX647673|GOLGA8B|440270|golgin A8 family, member B##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_001023567|GOLGA8B|440270|golgin A8 family, member B##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_181077|GOLGA8A|23015|golgin A8 family, member A##BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa##BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa##NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa##BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa##AK129892|ACTC1|70|actin, alpha, cardiac muscle 1##AK056592|ACTC1|70|actin, alpha, cardiac muscle 1##AK129902|ACTC1|70|actin, alpha, cardiac muscle 1##AK290616|ACTC1|70|actin, alpha, cardiac muscle 1##BC009978|ACTC1|70|actin, alpha, cardiac muscle 1##NM_005159|ACTC1|70|actin, alpha, cardiac muscle 1##AK291615|AQR|9716|aquarius homolog (mouse)##BC127111|AQR|9716|aquarius homolog (mouse)##BC127112|AQR|9716|aquarius homolog (mouse)##AB011132|AQR|9716|aquarius homolog (mouse)##AK315815|AQR|9716|aquarius homolog (mouse)##BX647820|AQR|9716|aquarius homolog (mouse)##EF553519|AQR|9716|aquarius homolog (mouse)##NM_014691|AQR|9716|aquarius homolog (mouse)	0.835419	CTCF.p2:7:0.835
chr14	96567023	96567161	reg1001250.p1	16.989	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	-61446	+	AK023027 TSC_hg19_v1_chr14_+_96342762	-224347	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-386625	-	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	103985	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	104104	+	AK291970 AK309528 NM_000710 TSC_hg19_v1_chr14_+_96722546 U30271 AJ238044	155462	+	NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##AK023027|LOC100507043|100507043|uncharacterized LOC100507043##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2##AK291970|BDKRB1|623|bradykinin receptor B1##AK309528|BDKRB1|623|bradykinin receptor B1##NM_000710|BDKRB1|623|bradykinin receptor B1##U30271|BDKRB1|623|bradykinin receptor B1##AJ238044|BDKRB1|623|bradykinin receptor B1	1.595465	CTCF.p2:-23:0.966	CTCF.p2:45:0.629
chr3	16090333	16090460	reg1000446.p2	16.988	+	AB002377 NM_015199 TSC_hg19_v1_chr3_-_15901096	-189384	-	TSC_hg19_v1_chr3_-_15839678 AK293770 NM_001195098	-250714	-	AY367056 NM_001195099 BC035170 BC048975	-292319	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	125798	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	215993	-	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	216312	+	AB002377|ANKRD28|23243|ankyrin repeat domain 28##NM_015199|ANKRD28|23243|ankyrin repeat domain 28##AK293770|ANKRD28|23243|ankyrin repeat domain 28##NM_001195098|ANKRD28|23243|ankyrin repeat domain 28##AY367056|ANKRD28|23243|ankyrin repeat domain 28##NM_001195099|ANKRD28|23243|ankyrin repeat domain 28##BC035170|ANKRD28|23243|ankyrin repeat domain 28##BC048975|ANKRD28|23243|ankyrin repeat domain 28##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1	0.984233	CTCF.p2:-14:0.984
chr1	206310485	206310603	reg1000974.p1	16.987	+	AK122631 NM_001007544	-21898	-	NM_000707 AF030512 AF101726 L37112 AB528977 EU432111	-86183	+	BC035696 NM_001123168 BC137545 BC137546	-171628	+	NM_001910 NM_148964 AJ250716 AJ250717 BC042537 TSC_hg19_v1_chr1_+_206317529 J05036 AK292057 CU692090 AK298069	6987	+	NM_001193321 NM_001193322 NM_014002	333041	+	TSC_hg19_v1_chr1_+_206643818 AK093798 AK310737 AY660028	333262	+	AK122631|C1orf186|440712|chromosome 1 open reading frame 186##NM_001007544|C1orf186|440712|chromosome 1 open reading frame 186##NM_000707|AVPR1B|553|arginine vasopressin receptor 1B##AF030512|AVPR1B|553|arginine vasopressin receptor 1B##AF101726|AVPR1B|553|arginine vasopressin receptor 1B##L37112|AVPR1B|553|arginine vasopressin receptor 1B##EU432111|AVPR1B|553|arginine vasopressin receptor 1B##BC035696|FAM72A|729533|family with sequence similarity 72, member A##NM_001123168|FAM72A|729533|family with sequence similarity 72, member A##BC137545|FAM72A|729533|family with sequence similarity 72, member A##BC137546|FAM72B|653820|family with sequence similarity 72, member B##NM_001910|CTSE|1510|cathepsin E##NM_148964|CTSE|1510|cathepsin E##AJ250716|CTSE|1510|cathepsin E##AJ250717|CTSE|1510|cathepsin E##BC042537|CTSE|1510|cathepsin E##J05036|CTSE|1510|cathepsin E##AK292057|CTSE|1510|cathepsin E##AK298069|CTSE|1510|cathepsin E##NM_001193321|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_001193322|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_014002|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AK093798|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AK310737|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AY660028|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	0.944414	CTCF.p2:7:0.944
chr9	130352282	130352413	reg1000581.p1	16.982	+	TSC_hg19_v1_chr9_-_130341311 AF151783 NM_001035534	-11059	-	TSC_hg19_v1_chr9_-_130331353 BC110345 NM_022833 AF192911	-20952	-	AB210016 BC067366 TSC_hg19_v1_chr9_-_130331266	-21142	-	TSC_hg19_v1_chr9_+_130374555 NM_001032221 NM_003165 AK295154 AK293984 AK295802 AF004562 AF004563 BC015749 Y12723 D63851 DQ895426 EU176334 CU677423	22226	+	AK094948 NM_001012502 BC141809	116935	+	HQ257888 TSC_hg19_v1_chr9_-_130477940 BC032117 BC047012 NM_001002913	125595	-	AF151783|FAM129B|64855|family with sequence similarity 129, member B##NM_001035534|FAM129B|64855|family with sequence similarity 129, member B##BC110345|FAM129B|64855|family with sequence similarity 129, member B##NM_022833|FAM129B|64855|family with sequence similarity 129, member B##AF192911|FAM129B|64855|family with sequence similarity 129, member B##AB210016|FAM129B|64855|family with sequence similarity 129, member B##BC067366|FAM129B|64855|family with sequence similarity 129, member B##NM_001032221|STXBP1|6812|syntaxin binding protein 1##NM_003165|STXBP1|6812|syntaxin binding protein 1##AK295154|STXBP1|6812|syntaxin binding protein 1##AK293984|STXBP1|6812|syntaxin binding protein 1##AK295802|STXBP1|6812|syntaxin binding protein 1##AF004562|STXBP1|6812|syntaxin binding protein 1##AF004563|STXBP1|6812|syntaxin binding protein 1##BC015749|STXBP1|6812|syntaxin binding protein 1##Y12723|STXBP1|6812|syntaxin binding protein 1##D63851|STXBP1|6812|syntaxin binding protein 1##DQ895426|STXBP1|6812|syntaxin binding protein 1##EU176334|STXBP1|6812|syntaxin binding protein 1##AK094948|C9orf117|286207|chromosome 9 open reading frame 117##NM_001012502|C9orf117|286207|chromosome 9 open reading frame 117##BC141809|C9orf117|286207|chromosome 9 open reading frame 117##HQ257888|PTRH1|138428|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)##BC047012|PTRH1|138428|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)##NM_001002913|PTRH1|138428|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)	0.189882	
chr1	51655222	51655346	reg1001078.p1	16.981	+	AK130995 NM_001136508	-87382	+	TSC_hg19_v1_chr1_+_51435925 U17074 CU674290 AB587581 CR450289 DQ891516 DQ894707	-219309	+	NM_078626	-219643	+	TSC_hg19_v1_chr1_+_51701939 AK293047	46643	+	TSC_hg19_v1_chr1_+_51701944 NM_014372	46665	+	BC036670 TSC_hg19_v1_chr1_+_51701971 BC047654	46690	+	AK130995|C1orf185|284546|chromosome 1 open reading frame 185##NM_001136508|C1orf185|284546|chromosome 1 open reading frame 185##U17074|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##CR450289|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##DQ891516|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##DQ894707|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##NM_078626|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##AK293047|RNF11|26994|ring finger protein 11##NM_014372|RNF11|26994|ring finger protein 11##BC036670|RNF11|26994|ring finger protein 11##BC047654|RNF11|26994|ring finger protein 11	0.505465	CTCF.p2:3:0.505
chr7	75495906	75496020	reg1001026.p1	16.980	+	AJ223461 BC069072 BC069391 NM_002991 U85768 AB590965 CU686790	-52934	-	NM_006072 AY358893	-76825	-	TSC_hg19_v1_chr7_-_75368305 AF486833 NM_001243198 NM_005338	-127653	-	AF226732 TSC_hg19_v1_chr7_+_75508369 NM_001040456 NM_001040457 BC069017 AK026590	12371	+	NM_000941 AK290529 TSC_hg19_v1_chr7_+_75544442	48478	+	BX648619 TSC_hg19_v1_chr7_+_75544474 AK129978 AK312543	48512	+	AJ223461|CCL24|6369|chemokine (C-C motif) ligand 24##BC069072|CCL24|6369|chemokine (C-C motif) ligand 24##BC069391|CCL24|6369|chemokine (C-C motif) ligand 24##NM_002991|CCL24|6369|chemokine (C-C motif) ligand 24##U85768|CCL24|6369|chemokine (C-C motif) ligand 24##NM_006072|CCL26|10344|chemokine (C-C motif) ligand 26##AY358893|CCL26|10344|chemokine (C-C motif) ligand 26##AF486833|HIP1|3092|huntingtin interacting protein 1##NM_001243198|HIP1|3092|huntingtin interacting protein 1##NM_005338|HIP1|3092|huntingtin interacting protein 1##AF226732|RHBDD2|57414|rhomboid domain containing 2##NM_001040456|RHBDD2|57414|rhomboid domain containing 2##NM_001040457|RHBDD2|57414|rhomboid domain containing 2##BC069017|RHBDD2|57414|rhomboid domain containing 2##AK026590|RHBDD2|57414|rhomboid domain containing 2##NM_000941|POR|5447|P450 (cytochrome) oxidoreductase##AK290529|POR|5447|P450 (cytochrome) oxidoreductase##BX648619|POR|5447|P450 (cytochrome) oxidoreductase##AK129978|POR|5447|P450 (cytochrome) oxidoreductase##AK312543|POR|5447|P450 (cytochrome) oxidoreductase	0.882878	CTCF.p2:0:0.883
chr6	111580298	111580444	reg1001301.p1	16.977	+	AB057445 NM_018593 BC066985 TSC_hg19_v1_chr6_+_111408810	-171576	+	TSC_hg19_v1_chr6_+_111408673 AK126183 BC034031	-171695	+	AK292165 TSC_hg19_v1_chr6_+_111303240 AK024740 AK301662 AL833613 BC005347 BC035314 NM_032194 CU690066	-277097	+	NM_153369 TSC_hg19_v1_chr6_+_111580541 AK093136 AX747946 AK292735 AK315016	152	+	TSC_hg19_v1_chr6_+_111580568 BC036115	201	+	BC038986 AF303220 AF157476 AF179428 AF179429 TSC_hg19_v1_chr6_-_111804167	223777	-	AB057445|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##NM_018593|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC066985|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##AK126183|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC034031|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##AK292165|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK024740|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK301662|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AL833613|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC005347|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC035314|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##NM_032194|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##NM_153369|KIAA1919|91749|KIAA1919##AK093136|KIAA1919|91749|KIAA1919##AK292735|KIAA1919|91749|KIAA1919##AK315016|KIAA1919|91749|KIAA1919##BC036115|KIAA1919|91749|KIAA1919##AF303220|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF157476|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179428|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179429|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)	0.0	
chr12	96455779	96455903	reg1000698.p1	16.972	+	AK301308 TSC_hg19_v1_chr12_-_96429399 AK310522 AK293630	-26426	-	CR457068 AB590523 AB209740 J02959 TSC_hg19_v1_chr12_-_96429366 BC032528 J03459 NM_000895 AK308184	-26508	-	BC096096 BC096097 BC096098 BC096099 D16626 AK303544 NM_002108 AK298736 AK297004 TSC_hg19_v1_chr12_-_96390137	-65767	-	TSC_hg19_v1_chr12_+_96588154 NM_005230 Z36715 AK312694	132285	+	TSC_hg19_v1_chr12_+_96588254 BC017371	132426	+	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	338142	-	AK301308|LTA4H|4048|leukotriene A4 hydrolase##AK293630|LTA4H|4048|leukotriene A4 hydrolase##CR457068|LTA4H|4048|leukotriene A4 hydrolase##AB209740|LTA4H|4048|leukotriene A4 hydrolase##J02959|LTA4H|4048|leukotriene A4 hydrolase##BC032528|LTA4H|4048|leukotriene A4 hydrolase##J03459|LTA4H|4048|leukotriene A4 hydrolase##NM_000895|LTA4H|4048|leukotriene A4 hydrolase##AK308184|LTA4H|4048|leukotriene A4 hydrolase##BC096096|HAL|3034|histidine ammonia-lyase##BC096097|HAL|3034|histidine ammonia-lyase##BC096098|HAL|3034|histidine ammonia-lyase##BC096099|HAL|3034|histidine ammonia-lyase##D16626|HAL|3034|histidine ammonia-lyase##AK303544|HAL|3034|histidine ammonia-lyase##NM_002108|HAL|3034|histidine ammonia-lyase##AK298736|HAL|3034|histidine ammonia-lyase##AK297004|HAL|3034|histidine ammonia-lyase##NM_005230|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##Z36715|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK312694|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17	0.993364	CTCF.p2:-15:0.993
chr17	39957947	39958069	reg1001083.p1	16.972	+	TSC_hg19_v1_chr17_-_39942964 AK226051 M23410 Z68228 BC000441 AK293479 NM_002230 NM_021991	-15025	-	DQ891420 DQ894594 AY243535 TSC_hg19_v1_chr17_-_39928132	-29887	-	TSC_hg19_v1_chr17_-_39928100 AB384746 CU680086	-29906	-	AY295765 TSC_hg19_v1_chr17_-_39967969	9935	-	TSC_hg19_v1_chr17_-_39968202 DQ893598 EU831442 EU831534 CU674526 U47621 BC011701 AK222945 BC007942 AK301301 BC001047 AJ250583	10192	-	NM_006455	10442	-	AK226051|JUP|3728|junction plakoglobin##M23410|JUP|3728|junction plakoglobin##Z68228|JUP|3728|junction plakoglobin##BC000441|JUP|3728|junction plakoglobin##NM_002230|JUP|3728|junction plakoglobin##NM_021991|JUP|3728|junction plakoglobin##DQ891420|JUP|3728|junction plakoglobin##DQ894594|JUP|3728|junction plakoglobin##AY243535|JUP|3728|junction plakoglobin##DQ893598|LEPREL4|10609|leprecan-like 4##EU831442|LEPREL4|10609|leprecan-like 4##EU831534|LEPREL4|10609|leprecan-like 4##U47621|LEPREL4|10609|leprecan-like 4##BC011701|LEPREL4|10609|leprecan-like 4##AK222945|LEPREL4|10609|leprecan-like 4##BC007942|LEPREL4|10609|leprecan-like 4##AK301301|LEPREL4|10609|leprecan-like 4##BC001047|LEPREL4|10609|leprecan-like 4##AJ250583|LEPREL4|10609|leprecan-like 4##NM_006455|LEPREL4|10609|leprecan-like 4	0.999369	CTCF.p2:4:0.999
chr9	130797562	130797695	reg1001248.p1	16.970	+	TSC_hg19_v1_chr9_-_130742813 AK058004 NM_001035254	-54819	-	BC137087 BC137088 BC047949 NM_203305 BC142952	-84697	-	BC015233 NM_003863	-96866	-	AK122729 NM_197956	31970	-	TSC_hg19_v1_chr9_+_130830492 AK290991 NM_001006641	32855	+	AJ619990 TSC_hg19_v1_chr9_+_130830643	32991	+	AK058004|FAM102A|399665|family with sequence similarity 102, member A##NM_001035254|FAM102A|399665|family with sequence similarity 102, member A##BC137087|FAM102A|399665|family with sequence similarity 102, member A##BC137088|FAM102A|399665|family with sequence similarity 102, member A##BC047949|FAM102A|399665|family with sequence similarity 102, member A##NM_203305|FAM102A|399665|family with sequence similarity 102, member A##BC142952|FAM102A|399665|family with sequence similarity 102, member A##BC015233|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##NM_003863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1##AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	0.850135	CTCF.p2:15:0.850
chr1	7727786	7727865	reg1000678.p1	16.969	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-882334	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-965894	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-965943	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	103551	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	116584	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	117000	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	1.046565	CTCF.p2:5:0.625	CTCF.p2:-50:0.422
chr9	124887571	124887696	reg1001142.p1	16.969	+	AF521886 NM_001139442 NM_194252	-31749	-	TSC_hg19_v1_chr9_-_124855560 AK125178	-32045	-	AY032952 NM_138709	-382570	+	TSC_hg19_v1_chr9_-_124922039 BC001016 AF044953	34379	-	TSC_hg19_v1_chr9_-_124922059 AK314135 AK301520 NM_014222	34440	-	AK128877 NM_198469 BC133690 AK302081 BC143440	34574	+	AF521886|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_001139442|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_194252|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##BC001016|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AF044953|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AK314135|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##NM_014222|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AK128877|MORN5|254956|MORN repeat containing 5##NM_198469|MORN5|254956|MORN repeat containing 5##BC133690|MORN5|254956|MORN repeat containing 5##AK302081|MORN5|254956|MORN repeat containing 5##BC143440|MORN5|254956|MORN repeat containing 5	0.996464	CTCF.p2:-12:0.996
chr19	42439134	42439242	reg1000798.p1	16.966	+	NM_199002 TSC_hg19_v1_chr19_+_42388510 BC034013 BC067262	-50702	+	TSC_hg19_v1_chr19_+_42387309 U64105	-51870	+	BC064996 TSC_hg19_v1_chr19_+_42387266 NM_004706 NM_198977 BC011726	-51911	+	AF112996 BT019964 CR457214 CR542116 AB590878 AF112202 AJ133534 BC008950 TSC_hg19_v1_chr19_-_42463499	24280	-	TSC_hg19_v1_chr19_-_42463500 NM_006423	24332	-	AK295833 TSC_hg19_v1_chr19_-_42498254	59049	-	NM_199002|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC034013|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC067262|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##U64105|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC064996|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_004706|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_198977|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC011726|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)##BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)##CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)##CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)##AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)##AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)##BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)##NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)##AK295833|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide	0.999808	CTCF.p2:6:1.000
chr17	60186931	60187077	reg1000898.p1	16.963	+	TSC_hg19_v1_chr17_-_60142600 BC140891 AF117754 NM_005121	-44377	-	TSC_hg19_v1_chr17_-_60005339 AB033113 AK308307 AK299032 AL136800 NM_020748	-181662	-	BC101472 BC101474 AF360549 TSC_hg19_v1_chr17_-_59940873 NM_032043	-246210	-	NM_001144933	260574	+	AK098684 NM_173503 BC101752 BC101778	270922	+	TSC_hg19_v1_chr17_+_60501257 NM_181725 BC006985 AB590991 AF161384 AK022822 AF161385	314259	+	BC140891|MED13|9969|mediator complex subunit 13##AF117754|MED13|9969|mediator complex subunit 13##NM_005121|MED13|9969|mediator complex subunit 13##AB033113|INTS2|57508|integrator complex subunit 2##AK308307|INTS2|57508|integrator complex subunit 2##AK299032|INTS2|57508|integrator complex subunit 2##AL136800|INTS2|57508|integrator complex subunit 2##NM_020748|INTS2|57508|integrator complex subunit 2##BC101472|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##BC101474|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AF360549|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_032043|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_001144933|EFCAB3|146779|EF-hand calcium binding domain 3##AK098684|EFCAB3|146779|EF-hand calcium binding domain 3##NM_173503|EFCAB3|146779|EF-hand calcium binding domain 3##BC101752|EFCAB3|146779|EF-hand calcium binding domain 3##BC101778|EFCAB3|146779|EF-hand calcium binding domain 3##NM_181725|METTL2A|339175|methyltransferase like 2A##BC006985|METTL2A|339175|methyltransferase like 2A##AF161384|METTL2A|339175|methyltransferase like 2A##AK022822|METTL2A|339175|methyltransferase like 2A##AF161385|METTL2A|339175|methyltransferase like 2A	1.164614	CTCF.p2:-23:0.975
chr3	32551745	32551864	reg1001032.p1	16.961	+	BC002797 TSC_hg19_v1_chr3_-_32544365 NM_017801	-7424	-	TSC_hg19_v1_chr3_-_32544335 AK000403	-7471	-	CR457231 TSC_hg19_v1_chr3_-_32544290	-7532	-	BX649189 TSC_hg19_v1_chr3_-_32612288 AK222573 AK222653 BC131620 AF078849 AK074348 AK293253 NM_016141	60470	-	TSC_hg19_v1_chr3_+_32726700 AK023227 AK022952 NM_015442 AK309670 BC006382 BC002931 BC002928 AK297085 AK298693 CU678296 CU678298 DQ892895 DQ896143 EU831494 EU831581	175001	+	DQ232881 NM_001039111	307705	+	BC002797|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##NM_017801|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##AK000403|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##CR457231|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK023227|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK022952|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##NM_015442|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK309670|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC006382|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002931|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002928|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK297085|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK298693|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ892895|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ896143|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831494|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831581|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ232881|TRIM71|131405|tripartite motif containing 71##NM_001039111|TRIM71|131405|tripartite motif containing 71	0.798684	CTCF.p2:-9:0.799
chrUn_gl000219	99987	100167	reg1019047.p2	16.960	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr20	22567409	22567529	reg1005683.p1	16.959	+	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	-1367	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	-2394	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	-2553	-	TSC_hg19_v1_chr20_+_23015949 BC117270 BC117272 NM_001052 BC069063	448565	+	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	462769	-	TSC_hg19_v1_chr20_-_23062805 AK056764	495343	-	AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##BC117270|SSTR4|6754|somatostatin receptor 4##BC117272|SSTR4|6754|somatostatin receptor 4##NM_001052|SSTR4|6754|somatostatin receptor 4##BC069063|SSTR4|6754|somatostatin receptor 4##BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##AK056764|CD93|22918|CD93 molecule	1.032774	CTCF.p2:22:0.874
chr19	10499662	10499807	reg1001281.p1	16.958	+	TSC_hg19_v1_chr19_-_10491245 AK308360 NM_003331 AK303627 AK308379	-8455	-	TSC_hg19_v1_chr19_-_10491192 X54637 AK222672 BC014243	-8543	-	AF340060 AF340061 AB463787 BC040123 S50015 AK309643 BC058903 X69819 TSC_hg19_v1_chr19_-_10450307 AK301071 AX746321 X69711 BC034409 BC046121 AK312826 AK226023 NM_002162	-49425	-	AB463478 AM393285 AM393349 BT006796 CR542249 DQ892174 DQ895369 U43077 TSC_hg19_v1_chr19_-_10514182	14435	-	TSC_hg19_v1_chr19_-_10514219 BC000083 BC008793 U63131	14479	-	TSC_hg19_v1_chr19_-_10514250 NM_007065	14522	-	AK308360|TYK2|7297|tyrosine kinase 2##NM_003331|TYK2|7297|tyrosine kinase 2##AK303627|TYK2|7297|tyrosine kinase 2##AK308379|TYK2|7297|tyrosine kinase 2##X54637|TYK2|7297|tyrosine kinase 2##AK222672|TYK2|7297|tyrosine kinase 2##BC014243|TYK2|7297|tyrosine kinase 2##AF340060|ICAM3|3385|intercellular adhesion molecule 3##AF340061|ICAM3|3385|intercellular adhesion molecule 3##BC040123|ICAM3|3385|intercellular adhesion molecule 3##S50015|ICAM3|3385|intercellular adhesion molecule 3##AK309643|ICAM3|3385|intercellular adhesion molecule 3##BC058903|ICAM3|3385|intercellular adhesion molecule 3##X69819|ICAM3|3385|intercellular adhesion molecule 3##AX746321|ICAM3|3385|intercellular adhesion molecule 3##X69711|ICAM3|3385|intercellular adhesion molecule 3##BC034409|ICAM3|3385|intercellular adhesion molecule 3##BC046121|ICAM3|3385|intercellular adhesion molecule 3##AK312826|ICAM3|3385|intercellular adhesion molecule 3##AK226023|ICAM3|3385|intercellular adhesion molecule 3##NM_002162|ICAM3|3385|intercellular adhesion molecule 3##AM393285|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AM393349|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BT006796|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##CR542249|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ892174|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ895369|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U43077|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC000083|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC008793|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U63131|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##NM_007065|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)	0.999225	CTCF.p2:1:0.999
chr2	16938550	16938682	reg1000957.p1	16.958	+	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	-91472	-	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-856449	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-856621	+	DQ860102 NM_001099218	761089	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	783271	+	TSC_hg19_v1_chr2_+_17721989 AF039555 U14747 AB001104	783404	+	BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1##AF039555|VSNL1|7447|visinin-like 1##U14747|VSNL1|7447|visinin-like 1##AB001104|VSNL1|7447|visinin-like 1	0.999846	CTCF.p2:23:1.000
chr21	43678812	43678944	reg1001038.p1	16.956	+	AK298491 AF323664 NM_207174	-38910	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	-39585	+	AF323662 NM_207629	-42692	+	TSC_hg19_v1_chr21_+_43710190 AF038175	31335	+	L08044 DQ891963 DQ895153 L15203 BC017859 TSC_hg19_v1_chr21_-_43735520	56613	-	NM_003226 AF432265	56854	-	AK298491|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323664|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207174|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323662|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207629|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##L08044|TFF3|7033|trefoil factor 3 (intestinal)##DQ891963|TFF3|7033|trefoil factor 3 (intestinal)##DQ895153|TFF3|7033|trefoil factor 3 (intestinal)##L15203|TFF3|7033|trefoil factor 3 (intestinal)##BC017859|TFF3|7033|trefoil factor 3 (intestinal)##NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)	0.987119	CTCF.p2:11:0.987
chr3	195642016	195642129	reg1000659.p2	16.956	+	NM_005781 L13738	-6156	-	AK131539 NM_001010938	-19641	-	BC008884 AK225786 BC020389 TSC_hg19_v1_chr3_-_195619679	-22507	-	TSC_hg19_v1_chr3_-_195717156 BC071730 AK300421 AK316025 AK299148	75059	-	TSC_hg19_v1_chr3_-_195808954 AB209254 X01060 BC001188	166872	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	166889	-	NM_005781|TNK2|10188|tyrosine kinase, non-receptor, 2##L13738|TNK2|10188|tyrosine kinase, non-receptor, 2##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2##BC008884|TNK2|10188|tyrosine kinase, non-receptor, 2##AK225786|TNK2|10188|tyrosine kinase, non-receptor, 2##BC020389|TNK2|10188|tyrosine kinase, non-receptor, 2##BC071730|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AK316025|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK299148|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AB209254|TFRC|7037|transferrin receptor (p90, CD71)##X01060|TFRC|7037|transferrin receptor (p90, CD71)##BC001188|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)	0.999919	CTCF.p2:4:1.000
chr9	92989171	92989303	reg1000960.p1	16.955	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-769256	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-876230	-	BC054500 NM_001142287 NM_006378	-894627	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	415882	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	574799	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	574830	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	1.340978	CTCF.p2:-23:0.966	CTCF.p2:79:0.375
chr8	8594528	8594666	reg1001275.p1	16.954	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	-34899	+	AK122582 NM_001080826	-355375	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-418709	-	TSC_hg19_v1_chr8_-_8751060 NM_004225	156341	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	265768	+	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	265908	+	AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1	0.984026	CTCF.p2:5:0.984
chr10	73329868	73329998	reg1000924.p1	16.947	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	-173195	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-250887	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-250908	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	149659	-	AK074172 NM_001168390	167647	-	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	203373	-	BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54	0.992541	CTCF.p2:9:0.979
chr19	2749339	2749444	reg1000668.p2	16.947	+	TSC_hg19_v1_chr19_-_2740065 NM_144564 NM_213568	-9324	-	TSC_hg19_v1_chr19_-_2740016 AK302600 BC020571 AK002044	-9363	-	TSC_hg19_v1_chr19_-_2740007 BC005869	-9387	-	TSC_hg19_v1_chr19_-_2783272 AJ133129 BC005165 BC008885 BC000390 BC002989	33871	-	TSC_hg19_v1_chr19_-_2783313 AL050156	33923	-	AK293535 TSC_hg19_v1_chr19_-_2783326	33936	-	NM_144564|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##NM_213568|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##AK302600|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##BC020571|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##AK002044|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##BC005869|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##AJ133129|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##BC005165|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##BC008885|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##BC000390|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##BC002989|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##AL050156|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##AK293535|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	0.933335	CTCF.p2:4:0.933
chr20	10071352	10071471	reg1001195.p1	16.946	+	NM_022096 NM_198798 AK097689 TSC_hg19_v1_chr20_+_10015744 BC022878 BC028189 BC011591	-55679	+	TSC_hg19_v1_chr20_-_9819519 AB040812 BC024179 AK291401 AK307926 AK095674 AK315820 NM_020341 NM_177990 AB033090 AX776013	-251844	-	TSC_hg19_v1_chr20_+_9495437 CU690786	-575949	+	TSC_hg19_v1_chr20_+_10199575 NM_003081 NM_130811 AK094560 AK098347 D21267 AK223617 AK314359 AK289647 BC010647 BX647443 AK098767 L19760 L19761	128116	+	TSC_hg19_v1_chr20_-_10200139 AK124961	128732	-	AF221993 NM_018848	341158	-	NM_022096|ANKRD5|63926|ankyrin repeat domain 5##NM_198798|ANKRD5|63926|ankyrin repeat domain 5##AK097689|ANKRD5|63926|ankyrin repeat domain 5##BC022878|ANKRD5|63926|ankyrin repeat domain 5##BC028189|ANKRD5|63926|ankyrin repeat domain 5##BC011591|ANKRD5|63926|ankyrin repeat domain 5##AB040812|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##BC024179|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK291401|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK307926|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK095674|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK315820|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_020341|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_177990|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AB033090|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AX776013|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_003081|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_130811|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK094560|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098347|SNAP25|6616|synaptosomal-associated protein, 25kDa##D21267|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK223617|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK314359|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK289647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BC010647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BX647443|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098767|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19760|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19761|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK124961|LOC100131208|100131208|uncharacterized LOC100131208##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome	0.166904	
chr4	174338265	174338415	reg1000923.p1	16.943	+	AJ224677 NM_007281	-17724	-	TSC_hg19_v1_chr4_+_174292104 BC016757	-46232	+	TSC_hg19_v1_chr4_+_174292088 NM_003864 AF055993	-46277	+	AF087940 TSC_hg19_v1_chr4_-_174450385 AB464563	112051	-	BC101406 BC101974 BC109383 TSC_hg19_v1_chr4_-_174450570	112210	-	TSC_hg19_v1_chr4_-_174451381 NM_021973 AK122739 FJ226608	113029	-	AJ224677|SCRG1|11341|stimulator of chondrogenesis 1##NM_007281|SCRG1|11341|stimulator of chondrogenesis 1##BC016757|SAP30|8819|Sin3A-associated protein, 30kDa##NM_003864|SAP30|8819|Sin3A-associated protein, 30kDa##AF055993|SAP30|8819|Sin3A-associated protein, 30kDa##AF087940|HAND2|9464|heart and neural crest derivatives expressed 2##BC101406|HAND2|9464|heart and neural crest derivatives expressed 2##BC101974|HAND2|9464|heart and neural crest derivatives expressed 2##BC109383|HAND2|9464|heart and neural crest derivatives expressed 2##NM_021973|HAND2|9464|heart and neural crest derivatives expressed 2##AK122739|HAND2|9464|heart and neural crest derivatives expressed 2##FJ226608|HAND2|9464|heart and neural crest derivatives expressed 2	0.997664	CTCF.p2:17:0.998
chr6	130051733	130051913	reg1000846.p1	16.941	+	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	-20497	-	NM_000426 NM_001079823 Z26653	-847510	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-1210167	-	NM_001010876	130592	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	287902	+	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	484632	-	BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3	0.998068	CTCF.p2:14:0.998
chr11	75095637	75095769	reg1001188.p1	16.940	+	AF084040 AF084940 FJ348262 CU678548 AB462955 TSC_hg19_v1_chr11_-_75062708 AK289718 BC003636 NM_004041 NM_020251	-32887	-	NM_001195528	-143754	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	-224862	+	TSC_hg19_v1_chr11_+_75110562 D28344 AK130960 BC034149 NM_001005 AK129794 AK313051 BC013231 BC100284 X55715 BC071917 AK223048 BC003137 BC071669 S42658 AB464166 CU678394 DQ892888 DQ896136 U14990 U14991 U14992 BC003577 BC013196 AB062288	14872	+	HQ258227 BC132708 BC132710 TSC_hg19_v1_chr11_-_75141083 AK091109 AX746783	45357	-	TSC_hg19_v1_chr11_-_75141247 BC042952 BC057763	45528	-	AF084040|ARRB1|408|arrestin, beta 1##AF084940|ARRB1|408|arrestin, beta 1##FJ348262|ARRB1|408|arrestin, beta 1##AK289718|ARRB1|408|arrestin, beta 1##BC003636|ARRB1|408|arrestin, beta 1##NM_004041|ARRB1|408|arrestin, beta 1##NM_020251|ARRB1|408|arrestin, beta 1##NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##D28344|RPS3|6188|ribosomal protein S3##AK130960|RPS3|6188|ribosomal protein S3##BC034149|RPS3|6188|ribosomal protein S3##NM_001005|RPS3|6188|ribosomal protein S3##AK129794|RPS3|6188|ribosomal protein S3##AK313051|RPS3|6188|ribosomal protein S3##BC013231|RPS3|6188|ribosomal protein S3##BC100284|RPS3|6188|ribosomal protein S3##X55715|RPS3|6188|ribosomal protein S3##BC071917|RPS3|6188|ribosomal protein S3##AK223048|RPS3|6188|ribosomal protein S3##BC003137|RPS3|6188|ribosomal protein S3##BC071669|RPS3|6188|ribosomal protein S3##S42658|RPS3|6188|ribosomal protein S3##DQ892888|RPS3|6188|ribosomal protein S3##DQ896136|RPS3|6188|ribosomal protein S3##U14990|RPS3|6188|ribosomal protein S3##U14991|RPS3|6188|ribosomal protein S3##U14992|RPS3|6188|ribosomal protein S3##BC003577|RPS3|6188|ribosomal protein S3##BC013196|RPS3|6188|ribosomal protein S3##AB062288|RPS3|6188|ribosomal protein S3##HQ258227|KLHL35|283212|kelch-like 35 (Drosophila)##BC132708|KLHL35|283212|kelch-like 35 (Drosophila)##BC132710|KLHL35|283212|kelch-like 35 (Drosophila)##AK091109|KLHL35|283212|kelch-like 35 (Drosophila)##BC042952|KLHL35|283212|kelch-like 35 (Drosophila)##BC057763|KLHL35|283212|kelch-like 35 (Drosophila)	0.986857	CTCF.p2:9:0.987
chr19	17457129	17457255	reg1001133.p1	16.940	+	NM_001128855 NM_032620 NM_133644 AF360742 AF360743 AY078987 AY078988 AK298485 AK027606 AK291929 BC019261 TSC_hg19_v1_chr19_+_17448396 BC017207 AK311442 AF360744 DQ892217 DQ895413 CU676414 CU677863	-8820	+	NM_001195422 AK297953	-11393	+	BC037307 TSC_hg19_v1_chr19_-_17445581 AB046843 NM_020959	-11556	-	CU691156 TSC_hg19_v1_chr19_-_17488155 AF348827 BC050365 BC056414 NM_031310 AF326591 AL834363 AK096030 AK313837	30940	-	CU689786 D28137 NM_004335 AK223124 AK291099 AK303593 TSC_hg19_v1_chr19_-_17516428 BC033873	59227	-	AK311380 AK055623 TSC_hg19_v1_chr19_+_17516630	59374	+	NM_001128855|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_032620|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_133644|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360742|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360743|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AY078987|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AY078988|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK298485|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK027606|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK291929|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC019261|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC017207|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK311442|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360744|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##DQ892217|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##DQ895413|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_001195422|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK297953|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC037307|ANO8|57719|anoctamin 8##AB046843|ANO8|57719|anoctamin 8##NM_020959|ANO8|57719|anoctamin 8##AF348827|PLVAP|83483|plasmalemma vesicle associated protein##BC050365|PLVAP|83483|plasmalemma vesicle associated protein##BC056414|PLVAP|83483|plasmalemma vesicle associated protein##NM_031310|PLVAP|83483|plasmalemma vesicle associated protein##AF326591|PLVAP|83483|plasmalemma vesicle associated protein##AL834363|PLVAP|83483|plasmalemma vesicle associated protein##AK096030|PLVAP|83483|plasmalemma vesicle associated protein##AK313837|PLVAP|83483|plasmalemma vesicle associated protein##D28137|BST2|684|bone marrow stromal cell antigen 2##NM_004335|BST2|684|bone marrow stromal cell antigen 2##AK223124|BST2|684|bone marrow stromal cell antigen 2##AK291099|BST2|684|bone marrow stromal cell antigen 2##AK303593|BST2|684|bone marrow stromal cell antigen 2##BC033873|BST2|684|bone marrow stromal cell antigen 2##AK311380|LOC100507535|100507535|uncharacterized LOC100507535##AK055623|LOC100507535|100507535|uncharacterized LOC100507535	0.966369	CTCF.p2:-13:0.966
chrX	149940769	149940894	reg1000748.p1	16.939	+	TSC_hg19_v1_chrX_+_149861868 BC032947 NM_003828 AK226109 AF057354 AJ224979	-78910	+	AL832715 AK297021 BC030779 TSC_hg19_v1_chrX_+_149737092	-203727	+	TSC_hg19_v1_chrX_+_149737070 NM_000252 AK291710 U46024 AK297057 AK304036	-203785	+	AM393605 AM393786 DQ891322 DQ894506 AK290200 TSC_hg19_v1_chrX_-_150067096 AK293244 AY078165 AY078166 AY078167 AK125020 AK291375 BC025729 AK295217	126262	-	TSC_hg19_v1_chrX_-_150067149 BC030536 AY358837 AL136580 NM_001184808 NM_001242614 NM_031462 NM_134445 NM_134446	126376	-	TSC_hg19_v1_chrX_+_150151807 BX537505 NM_005342 Y10043 BC070482	210976	+	BC032947|MTMR1|8776|myotubularin related protein 1##NM_003828|MTMR1|8776|myotubularin related protein 1##AK226109|MTMR1|8776|myotubularin related protein 1##AF057354|MTMR1|8776|myotubularin related protein 1##AJ224979|MTMR1|8776|myotubularin related protein 1##AL832715|MTM1|4534|myotubularin 1##AK297021|MTM1|4534|myotubularin 1##BC030779|MTM1|4534|myotubularin 1##NM_000252|MTM1|4534|myotubularin 1##AK291710|MTM1|4534|myotubularin 1##U46024|MTM1|4534|myotubularin 1##AK297057|MTM1|4534|myotubularin 1##AK304036|MTM1|4534|myotubularin 1##AM393605|CD99L2|83692|CD99 molecule-like 2##AM393786|CD99L2|83692|CD99 molecule-like 2##DQ891322|CD99L2|83692|CD99 molecule-like 2##DQ894506|CD99L2|83692|CD99 molecule-like 2##AK290200|CD99L2|83692|CD99 molecule-like 2##AK293244|CD99L2|83692|CD99 molecule-like 2##AY078165|CD99L2|83692|CD99 molecule-like 2##AY078166|CD99L2|83692|CD99 molecule-like 2##AY078167|CD99L2|83692|CD99 molecule-like 2##AK125020|CD99L2|83692|CD99 molecule-like 2##AK291375|CD99L2|83692|CD99 molecule-like 2##BC025729|CD99L2|83692|CD99 molecule-like 2##AK295217|CD99L2|83692|CD99 molecule-like 2##BC030536|CD99L2|83692|CD99 molecule-like 2##AY358837|CD99L2|83692|CD99 molecule-like 2##AL136580|CD99L2|83692|CD99 molecule-like 2##NM_001184808|CD99L2|83692|CD99 molecule-like 2##NM_001242614|CD99L2|83692|CD99 molecule-like 2##NM_031462|CD99L2|83692|CD99 molecule-like 2##NM_134445|CD99L2|83692|CD99 molecule-like 2##NM_134446|CD99L2|83692|CD99 molecule-like 2##BX537505|HMGB3|3149|high mobility group box 3##NM_005342|HMGB3|3149|high mobility group box 3##Y10043|HMGB3|3149|high mobility group box 3##BC070482|HMGB3|3149|high mobility group box 3	0.984699	CTCF.p2:-15:0.985
chr9	132546139	132546276	reg1001046.p1	16.938	+	AB590756 AF027740 AF217965 AF010316 TSC_hg19_v1_chr9_-_132515313 AK311947 BC008280 NM_004878	-30891	-	TSC_hg19_v1_chr9_+_132428029 AF061970	-118141	+	BC014645 NM_016307 TSC_hg19_v1_chr9_+_132427927	-118284	+	TSC_hg19_v1_chr9_+_132565426 AF317129 NM_014506	19213	+	TSC_hg19_v1_chr9_+_132565465 BC015578 DQ893204 DQ893205 DQ893696 DQ896532 DQ896533 DQ896867	19266	+	BT006931 AB590352 DQ892657 DQ895897 TSC_hg19_v1_chr9_-_132586385 BC014484 AK314505 AK075343	40173	-	AF027740|PTGES|9536|prostaglandin E synthase##AF217965|PTGES|9536|prostaglandin E synthase##AF010316|PTGES|9536|prostaglandin E synthase##AK311947|PTGES|9536|prostaglandin E synthase##BC008280|PTGES|9536|prostaglandin E synthase##NM_004878|PTGES|9536|prostaglandin E synthase##AF061970|PRRX2|51450|paired related homeobox 2##BC014645|PRRX2|51450|paired related homeobox 2##NM_016307|PRRX2|51450|paired related homeobox 2##AF317129|TOR1B|27348|torsin family 1, member B (torsin B)##NM_014506|TOR1B|27348|torsin family 1, member B (torsin B)##BC015578|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893204|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893205|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893696|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896532|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896533|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896867|TOR1B|27348|torsin family 1, member B (torsin B)##BT006931|TOR1A|1861|torsin family 1, member A (torsin A)##DQ892657|TOR1A|1861|torsin family 1, member A (torsin A)##DQ895897|TOR1A|1861|torsin family 1, member A (torsin A)##BC014484|TOR1A|1861|torsin family 1, member A (torsin A)##AK314505|TOR1A|1861|torsin family 1, member A (torsin A)##AK075343|TOR1A|1861|torsin family 1, member A (torsin A)	0.89632	CTCF.p2:11:0.896
chr5	153784847	153784994	reg1001017.p1	16.936	+	TSC_hg19_v1_chr5_+_153570292 BC050333 NM_198321 AK127135 AB078145 AB527381 AJ505950 AK074132	-214562	+	TSC_hg19_v1_chr5_+_153418558 AK315573 BC026244	-366360	+	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	-366396	+	TSC_hg19_v1_chr5_-_153825380 BC042059 AK095428	40447	-	TSC_hg19_v1_chr5_+_153825535 AK021588 NM_001131062 NM_001131063 NM_024632	40599	+	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	40690	+	BC050333|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##NM_198321|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK127135|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AB078145|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AJ505950|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK074132|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK315573|MFAP3|4238|microfibrillar-associated protein 3##BC026244|MFAP3|4238|microfibrillar-associated protein 3##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3##BC042059|FLJ38109|386627|uncharacterized LOC386627##AK095428|FLJ38109|386627|uncharacterized LOC386627##AK021588|SAP30L|79685|SAP30-like##NM_001131062|SAP30L|79685|SAP30-like##NM_001131063|SAP30L|79685|SAP30-like##NM_024632|SAP30L|79685|SAP30-like##AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like	0.971091	CTCF.p2:25:0.971
chr5	153559793	153559926	reg1001493.p1	16.935	+	TSC_hg19_v1_chr5_+_153418558 AK315573 BC026244	-141299	+	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	-141335	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	-141402	-	TSC_hg19_v1_chr5_+_153570292 BC050333 NM_198321 AK127135 AB078145 AB527381 AJ505950 AK074132	10499	+	TSC_hg19_v1_chr5_-_153825380 BC042059 AK095428	265508	-	TSC_hg19_v1_chr5_+_153825535 AK021588 NM_001131062 NM_001131063 NM_024632	265660	+	AK315573|MFAP3|4238|microfibrillar-associated protein 3##BC026244|MFAP3|4238|microfibrillar-associated protein 3##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2##BC050333|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##NM_198321|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK127135|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AB078145|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AJ505950|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK074132|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##BC042059|FLJ38109|386627|uncharacterized LOC386627##AK095428|FLJ38109|386627|uncharacterized LOC386627##AK021588|SAP30L|79685|SAP30-like##NM_001131062|SAP30L|79685|SAP30-like##NM_001131063|SAP30L|79685|SAP30-like##NM_024632|SAP30L|79685|SAP30-like	0.962482	CTCF.p2:-4:0.962
chr22	32373288	32373421	reg1001318.p1	16.933	+	AJ704765 AJ704766 AL050256 NM_015372 AK315264	-32033	-	TSC_hg19_v1_chr22_+_32340608 AK312650 CR456612 AB385077 L20422 CU013208 CU013496	-32699	+	TSC_hg19_v1_chr22_+_32340520 NM_003405 X78138 BC003047 S80794	-32866	+	DQ656053 NM_000343 TSC_hg19_v1_chr22_+_32439037	65675	+	TSC_hg19_v1_chr22_+_32439103 AK312948	65759	+	TSC_hg19_v1_chr22_+_32439229 CR456579	65869	+	AJ704765|C22orf24|25775|chromosome 22 open reading frame 24##AJ704766|C22orf24|25775|chromosome 22 open reading frame 24##AL050256|C22orf24|25775|chromosome 22 open reading frame 24##NM_015372|C22orf24|25775|chromosome 22 open reading frame 24##AK315264|C22orf24|25775|chromosome 22 open reading frame 24##AK312650|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CR456612|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##L20422|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CU013208|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CU013496|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##NM_003405|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##X78138|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##BC003047|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##S80794|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##DQ656053|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##NM_000343|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##AK312948|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CR456579|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1	0.947511	CTCF.p2:-6:0.948
chr1	150022700	150022816	reg1000725.p2	16.932	+	AJ293573 BC072681 BC020622 TSC_hg19_v1_chr1_-_149982676 AK299790 NM_020205	-40136	-	AK298775 AK304820 TSC_hg19_v1_chr1_-_149908763 BC094756 NM_001145862	-113984	-	AK304691 U78556 U78557 TSC_hg19_v1_chr1_-_149908741 BC064372	-114024	-	NM_007259 BC028382 AK301994 AK298786	16631	+	TSC_hg19_v1_chr1_+_150039889 AK298835 AK023170 AK293555 BC012932 AF165513 AK295529 AJ133421 AK223214 AK307949 CU688480	17106	+	TSC_hg19_v1_chr1_+_150122120 AK302255 AF192912 AF291105 NM_016274	99374	+	AJ293573|OTUD7B|56957|OTU domain containing 7B##BC072681|OTUD7B|56957|OTU domain containing 7B##BC020622|OTUD7B|56957|OTU domain containing 7B##AK299790|OTUD7B|56957|OTU domain containing 7B##NM_020205|OTUD7B|56957|OTU domain containing 7B##AK298775|MTMR11|10903|myotubularin related protein 11##AK304820|MTMR11|10903|myotubularin related protein 11##BC094756|MTMR11|10903|myotubularin related protein 11##NM_001145862|MTMR11|10903|myotubularin related protein 11##AK304691|MTMR11|10903|myotubularin related protein 11##U78556|MTMR11|10903|myotubularin related protein 11##U78557|MTMR11|10903|myotubularin related protein 11##BC064372|MTMR11|10903|myotubularin related protein 11##NM_007259|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##BC028382|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK301994|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK298786|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK298835|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK023170|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK293555|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##BC012932|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AF165513|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK295529|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AJ133421|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK223214|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK307949|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK302255|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF192912|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF291105|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##NM_016274|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1	0.0	
chr3	58173582	58173695	reg1000675.p1	16.929	+	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	-179491	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-430436	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-494899	-	NM_004944	26759	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	49645	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	49892	+	AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6	0.321437	CTCF.p2:-21:0.321
chr9	117415920	117416034	reg1000708.p1	16.928	+	TSC_hg19_v1_chr9_+_117373735 NM_153045 AK289383 BC107133 BC107134 BX649023	-42208	+	TSC_hg19_v1_chr9_+_117350103 CU678965 CR456971 CR542237	-65870	+	NM_004888 TSC_hg19_v1_chr9_+_117350048 BC003564 AF038954 BC008452	-65939	+	NM_001199233	28391	-	AY434464 NM_001204344	138832	-	AB590753 AK291642 BC074940 BC074941 BC069435 AK313721 BC104462 BC104463 NM_005118 AF520785	152374	-	NM_153045|C9orf91|203197|chromosome 9 open reading frame 91##AK289383|C9orf91|203197|chromosome 9 open reading frame 91##BC107133|C9orf91|203197|chromosome 9 open reading frame 91##BC107134|C9orf91|203197|chromosome 9 open reading frame 91##BX649023|C9orf91|203197|chromosome 9 open reading frame 91##CR456971|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##CR542237|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##NM_001199233|LOC100505478|100505478|uncharacterized LOC100505478##AY434464|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001204344|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK291642|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074940|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074941|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC069435|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313721|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104462|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104463|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_005118|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AF520785|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15	0.37566	CTCF.p2:13:0.376
chr7	128858535	128858644	reg1000718.p1	16.922	+	BC009989 NM_005631	-29877	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-163384	-	TSC_hg19_v1_chr7_-_128695168 BC009923	-163441	-	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	6240	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	149397	+	TSC_hg19_v1_chr7_+_129008062 AK025372	149499	+	BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3##NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2	0.999337	CTCF.p2:-18:0.999
chr10	75639517	75639650	reg1001130.p1	16.920	+	AB590440 L07044 DQ892365 DQ895574 DQ896692 TSC_hg19_v1_chr10_-_75634275 U66064 AK131199 AK095576 BC034044 AK225771 AK291704 AK301180 NM_001204492 NM_001222 NM_172169 NM_172170 NM_172171 NM_172173	-5264	-	TSC_hg19_v1_chr10_-_75571579 BC018681 AK303648 NM_003635	-68018	-	BC035711 TSC_hg19_v1_chr10_-_75571357 BC052780	-68209	-	NM_001145031 NM_002658 TSC_hg19_v1_chr10_+_75670889 AK297940 AK298560 AK312960	31294	+	BC013575 K03226 M15476 D00244 TSC_hg19_v1_chr10_+_75670948 X02760	31358	+	AB208961 TSC_hg19_v1_chr10_+_75673428	33804	+	L07044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ892365|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ895574|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ896692|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##U66064|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK131199|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK095576|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##BC034044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK225771|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK291704|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK301180|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001204492|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001222|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172169|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172170|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172171|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172173|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##BC018681|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##AK303648|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##NM_003635|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##BC035711|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##NM_001145031|PLAU|5328|plasminogen activator, urokinase##NM_002658|PLAU|5328|plasminogen activator, urokinase##AK297940|PLAU|5328|plasminogen activator, urokinase##AK298560|PLAU|5328|plasminogen activator, urokinase##AK312960|PLAU|5328|plasminogen activator, urokinase##BC013575|PLAU|5328|plasminogen activator, urokinase##K03226|PLAU|5328|plasminogen activator, urokinase##M15476|PLAU|5328|plasminogen activator, urokinase##D00244|PLAU|5328|plasminogen activator, urokinase##X02760|PLAU|5328|plasminogen activator, urokinase##AB208961|PLAU|5328|plasminogen activator, urokinase	0.968159	CTCF.p2:8:0.968
chrX	22210935	22211072	reg1001469.p1	16.920	+	NM_000444 U87284 AD000712 AK298030 BC105057 BC105059 U75645 U60475	-159978	+	NM_004595 TSC_hg19_v1_chrX_+_21958824 AD001528 AK293455 AK313834 BC009898 BC085621 EU176347	-252177	+	AK091850 NM_206923	-336899	+	GQ355336 NM_152577 AK098601 BC074910 BC126190 BC126192 HQ258412 HQ258552	80065	+	AY039237 NM_182699 BC067878 BC051703	807081	+	AK298796 NM_173495 AK054858 BC121061	1142057	+	NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##NM_004595|SMS|6611|spermine synthase##AD001528|SMS|6611|spermine synthase##AK293455|SMS|6611|spermine synthase##AK313834|SMS|6611|spermine synthase##BC009898|SMS|6611|spermine synthase##BC085621|SMS|6611|spermine synthase##EU176347|SMS|6611|spermine synthase##AK091850|YY2|404281|YY2 transcription factor##NM_206923|YY2|404281|YY2 transcription factor##GQ355336|ZNF645|158506|zinc finger protein 645##NM_152577|ZNF645|158506|zinc finger protein 645##AK098601|ZNF645|158506|zinc finger protein 645##BC074910|ZNF645|158506|zinc finger protein 645##BC126190|ZNF645|158506|zinc finger protein 645##BC126192|ZNF645|158506|zinc finger protein 645##HQ258412|ZNF645|158506|zinc finger protein 645##HQ258552|ZNF645|158506|zinc finger protein 645##AY039237|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##NM_182699|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC067878|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC051703|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##AK298796|PTCHD1|139411|patched domain containing 1##NM_173495|PTCHD1|139411|patched domain containing 1##AK054858|PTCHD1|139411|patched domain containing 1##BC121061|PTCHD1|139411|patched domain containing 1	0.351369	
chr1	38148161	38148291	reg1001228.p1	16.918	+	TSC_hg19_v1_chr1_-_38100578 NM_001038633 NM_001242908 NM_001242909 NM_001242910	-47619	-	DQ318235 AK098225 DQ165084 DQ165085 TSC_hg19_v1_chr1_-_38100359	-47903	-	TSC_hg19_v1_chr1_-_38061544 NM_013285	-86662	-	TSC_hg19_v1_chr1_-_38156198 AK316093 AK299377 BC063843 AK000515 NM_017850	7955	-	TSC_hg19_v1_chr1_+_38158167 AK001330 AK222549 AY508815 BC001651 NM_018101 AK022104	9922	+	BC000703 TSC_hg19_v1_chr1_+_38158187	9955	+	NM_001038633|RSPO1|284654|R-spondin 1##NM_001242908|RSPO1|284654|R-spondin 1##NM_001242909|RSPO1|284654|R-spondin 1##NM_001242910|RSPO1|284654|R-spondin 1##DQ318235|RSPO1|284654|R-spondin 1##AK098225|RSPO1|284654|R-spondin 1##DQ165084|RSPO1|284654|R-spondin 1##DQ165085|RSPO1|284654|R-spondin 1##NM_013285|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##AK316093|C1orf109|54955|chromosome 1 open reading frame 109##AK299377|C1orf109|54955|chromosome 1 open reading frame 109##BC063843|C1orf109|54955|chromosome 1 open reading frame 109##AK000515|C1orf109|54955|chromosome 1 open reading frame 109##NM_017850|C1orf109|54955|chromosome 1 open reading frame 109##AK001330|CDCA8|55143|cell division cycle associated 8##AK222549|CDCA8|55143|cell division cycle associated 8##AY508815|CDCA8|55143|cell division cycle associated 8##BC001651|CDCA8|55143|cell division cycle associated 8##NM_018101|CDCA8|55143|cell division cycle associated 8##AK022104|CDCA8|55143|cell division cycle associated 8##BC000703|CDCA8|55143|cell division cycle associated 8	0.995733	CTCF.p2:11:0.996
chr5	177503256	177503384	reg1000422.p2	16.918	+	TSC_hg19_v1_chr5_+_177482580 AB055766	-20742	+	AF076215 NM_006261	-80078	-	AB018295 NM_173663	-295836	-	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	37308	+	TSC_hg19_v1_chr5_+_177558014 AK093481 AK094065 AX748156 AX748436 AK125337	54691	+	TSC_hg19_v1_chr5_+_177558026 BC009911 DQ494789 NM_022762	54712	+	AB055766|RPL19|6143|ribosomal protein L19##AF076215|PROP1|5626|PROP paired-like homeobox 1##NM_006261|PROP1|5626|PROP paired-like homeobox 1##AB018295|FAM153A|285596|family with sequence similarity 153, member A##NM_173663|FAM153A|285596|family with sequence similarity 153, member A##BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3##AK093481|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK094065|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK125337|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##BC009911|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##DQ494789|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##NM_022762|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)	0.979848	CTCF.p2:-8:0.980
chr22	31151503	31151626	reg1001085.p1	16.916	+	AF323731 NM_030758 AK097581 AK294007 BC118914 AB051451 AB384622 AF288741	-60719	+	BC031973 TSC_hg19_v1_chr22_+_31063955	-87630	+	TSC_hg19_v1_chr22_-_31063837 BC030987 BC028724 AF461689 AK056074 NM_152511	-87729	-	AB020659 NM_014941	212622	-	AK056480 TSC_hg19_v1_chr22_+_31366813	215173	+	TSC_hg19_v1_chr22_+_31477303 NM_006932 NM_134269 NM_134270 AK128719 AF064238 AJ010306 AY061971 AY061972 Y13492 AK096953 AK293681 BC034237 AK300854	325718	+	AF323731|OSBP2|23762|oxysterol binding protein 2##NM_030758|OSBP2|23762|oxysterol binding protein 2##AK097581|OSBP2|23762|oxysterol binding protein 2##AK294007|OSBP2|23762|oxysterol binding protein 2##BC118914|OSBP2|23762|oxysterol binding protein 2##AB051451|OSBP2|23762|oxysterol binding protein 2##AF288741|OSBP2|23762|oxysterol binding protein 2##BC030987|DUSP18|150290|dual specificity phosphatase 18##BC028724|DUSP18|150290|dual specificity phosphatase 18##AF461689|DUSP18|150290|dual specificity phosphatase 18##AK056074|DUSP18|150290|dual specificity phosphatase 18##NM_152511|DUSP18|150290|dual specificity phosphatase 18##AB020659|MORC2|22880|MORC family CW-type zinc finger 2##NM_014941|MORC2|22880|MORC family CW-type zinc finger 2##NM_006932|SMTN|6525|smoothelin##NM_134269|SMTN|6525|smoothelin##NM_134270|SMTN|6525|smoothelin##AK128719|SMTN|6525|smoothelin##AF064238|SMTN|6525|smoothelin##AJ010306|SMTN|6525|smoothelin##AY061971|SMTN|6525|smoothelin##AY061972|SMTN|6525|smoothelin##Y13492|SMTN|6525|smoothelin##AK096953|SMTN|6525|smoothelin##AK293681|SMTN|6525|smoothelin##BC034237|SMTN|6525|smoothelin##AK300854|SMTN|6525|smoothelin	0.9943	CTCF.p2:11:0.994
chr11	66079384	66079530	reg1001094.p1	16.915	+	TSC_hg19_v1_chr11_+_66059364 NM_153266	-20083	+	TSC_hg19_v1_chr11_+_66059337 BC033898	-20119	+	AK308988 TSC_hg19_v1_chr11_-_66056607 AK226003 AK291124 NM_020470	-22833	-	BC051340 AF279142 TSC_hg19_v1_chr11_-_66084516 AJ295846 BC098158 BC104484 BC105633 NM_020404	5055	-	DQ893675 DQ895838 AB590240 AK297757 TSC_hg19_v1_chr11_-_66103914 BC014417 L36463 NM_004292	24479	-	BC009834 TSC_hg19_v1_chr11_-_66112576 AF159141 AK310991 NM_001024957 NM_015399	33103	-	NM_153266|TMEM151A|256472|transmembrane protein 151A##BC033898|TMEM151A|256472|transmembrane protein 151A##AK308988|YIF1A|10897|Yip1 interacting factor homolog A (S. cerevisiae)##AK226003|YIF1A|10897|Yip1 interacting factor homolog A (S. cerevisiae)##AK291124|YIF1A|10897|Yip1 interacting factor homolog A (S. cerevisiae)##NM_020470|YIF1A|10897|Yip1 interacting factor homolog A (S. cerevisiae)##BC051340|CD248|57124|CD248 molecule, endosialin##AF279142|CD248|57124|CD248 molecule, endosialin##AJ295846|CD248|57124|CD248 molecule, endosialin##BC104484|CD248|57124|CD248 molecule, endosialin##BC105633|CD248|57124|CD248 molecule, endosialin##NM_020404|CD248|57124|CD248 molecule, endosialin##DQ893675|RIN1|9610|Ras and Rab interactor 1##DQ895838|RIN1|9610|Ras and Rab interactor 1##AK297757|RIN1|9610|Ras and Rab interactor 1##BC014417|RIN1|9610|Ras and Rab interactor 1##L36463|RIN1|9610|Ras and Rab interactor 1##NM_004292|RIN1|9610|Ras and Rab interactor 1##BC009834|BRMS1|25855|breast cancer metastasis suppressor 1##AF159141|BRMS1|25855|breast cancer metastasis suppressor 1##AK310991|BRMS1|25855|breast cancer metastasis suppressor 1##NM_001024957|BRMS1|25855|breast cancer metastasis suppressor 1##NM_015399|BRMS1|25855|breast cancer metastasis suppressor 1	0.019245	
chr9	139929807	139929919	reg1000619.p2	16.915	+	HQ258737 TSC_hg19_v1_chr9_+_139927632 AK093587 AX748216	-2289	+	BC086312 NM_004479	-2572	-	TSC_hg19_v1_chr9_-_139923225 BC144588 BC144589 NM_212533	-6570	-	TSC_hg19_v1_chr9_-_139940543 AK225091 AF272357	10646	-	TSC_hg19_v1_chr9_-_139940559 BC004217	10699	-	TSC_hg19_v1_chr9_-_139940630 AF327349 AK074793 AF285836 NM_015392	10776	-	HQ258737|C9orf139|401563|chromosome 9 open reading frame 139##AK093587|C9orf139|401563|chromosome 9 open reading frame 139##BC086312|FUT7|2529|fucosyltransferase 7 (alpha (1,3) fucosyltransferase)##NM_004479|FUT7|2529|fucosyltransferase 7 (alpha (1,3) fucosyltransferase)##BC144588|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC144589|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##NM_212533|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##AK225091|NPDC1|56654|neural proliferation, differentiation and control, 1##AF272357|NPDC1|56654|neural proliferation, differentiation and control, 1##BC004217|NPDC1|56654|neural proliferation, differentiation and control, 1##AF327349|NPDC1|56654|neural proliferation, differentiation and control, 1##AK074793|NPDC1|56654|neural proliferation, differentiation and control, 1##AF285836|NPDC1|56654|neural proliferation, differentiation and control, 1##NM_015392|NPDC1|56654|neural proliferation, differentiation and control, 1	0.100465	
chr10	30287388	30287518	reg1001033.p1	16.914	+	TSC_hg19_v1_chr10_-_30025865 AK307640	-261547	-	TSC_hg19_v1_chr10_-_30024866 AF051850 NM_003174	-262689	-	AF109135 NM_021738 TSC_hg19_v1_chr10_-_29923901	-363546	-	TSC_hg19_v1_chr10_-_30316350 BC047548	28978	-	TSC_hg19_v1_chr10_-_30348516 AK308850 NM_020848 BC071601	61041	-	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	350780	-	AK307640|SVIL|6840|supervillin##AF051850|SVIL|6840|supervillin##NM_003174|SVIL|6840|supervillin##AF109135|SVIL|6840|supervillin##NM_021738|SVIL|6840|supervillin##BC047548|KIAA1462|57608|KIAA1462##AK308850|KIAA1462|57608|KIAA1462##NM_020848|KIAA1462|57608|KIAA1462##BC071601|KIAA1462|57608|KIAA1462##AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase	1.303306	CTCF.p2:-8:0.885	CTCF.p2:35:0.418
chr7	362191	362283	reg1000749.p1	16.914	+	NM_001195127	-32102	+	BC040074 TSC_hg19_v1_chr7_+_193137	-169092	+	AF533706 NM_020223 TSC_hg19_v1_chr7_+_193043	-169220	+	TSC_hg19_v1_chr7_-_558849 AK292217	196597	-	X03795 X06374 TSC_hg19_v1_chr7_-_559093	196827	-	TSC_hg19_v1_chr7_-_559484 NM_002607 NM_033023	197248	-	NM_001195127|LOC100288524|100288524|forkhead box L1-like##BC040074|FAM20C|56975|family with sequence similarity 20, member C##AF533706|FAM20C|56975|family with sequence similarity 20, member C##NM_020223|FAM20C|56975|family with sequence similarity 20, member C##AK292217|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X03795|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X06374|PDGFA|5154|platelet-derived growth factor alpha polypeptide##NM_002607|PDGFA|5154|platelet-derived growth factor alpha polypeptide##NM_033023|PDGFA|5154|platelet-derived growth factor alpha polypeptide	0.998923	CTCF.p2:6:0.999
chr11	129201820	129201935	reg1000768.p2	16.911	+	EF127492 NM_001142685	-139785	-	AB018255 AY194287 TSC_hg19_v1_chr11_-_128894084 AB079856 NM_014715	-307816	-	NM_001195195 NM_001251964 NM_022112	-388584	-	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	44004	+	TSC_hg19_v1_chr11_+_129685744 AK098106 NM_138788 AK290283 AK292058	483867	+	NM_006165 X80878	561026	-	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##AB018255|ARHGAP32|9743|Rho GTPase activating protein 32##AY194287|ARHGAP32|9743|Rho GTPase activating protein 32##AB079856|ARHGAP32|9743|Rho GTPase activating protein 32##NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001195195|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001251964|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_022112|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2##AK098106|TMEM45B|120224|transmembrane protein 45B##NM_138788|TMEM45B|120224|transmembrane protein 45B##AK290283|TMEM45B|120224|transmembrane protein 45B##AK292058|TMEM45B|120224|transmembrane protein 45B##NM_006165|NFRKB|4798|nuclear factor related to kappaB binding protein##X80878|NFRKB|4798|nuclear factor related to kappaB binding protein	0.99852	CTCF.p2:16:0.999
chr12	59543939	59544062	reg1001151.p1	16.909	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-229698	-	AY505340 BC126169 BC126171 BC143960 AY358288 NM_153377 TSC_hg19_v1_chr12_-_59314272	-229823	-	AK301162 AY358295 NM_001136051	-230685	-	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	445917	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	539139	+	BC050347 NM_178539	3042583	-	AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2	1.898868	CTCF.p2:19:0.918	CTCF.p2:-29:0.981
chr1	167411500	167411630	reg1001063.p1	16.907	+	TSC_hg19_v1_chr1_+_167298389 AY113189 BC001664 BC003571	-113126	+	NM_001198783 TSC_hg19_v1_chr1_+_167298306	-113267	+	TSC_hg19_v1_chr1_+_167190127 NM_001198786 NM_002697 AK302525 AK303201 AK308004 AK091438 S66901 BC052274 X13403	-221508	+	AB590419 CU693020 DQ893778 EU176191 X55510 X55511 X55512 BC025703 AK128376 AK313946 J04132 AK223325 NM_000734 NM_198053	76208	-	DQ891131 DQ894310 AB463481 AY359071 BC006786 BC008628 TSC_hg19_v1_chr1_-_167523000 AK130006 AK315497 AK075375 AK095456 AF084523	111426	-	TSC_hg19_v1_chr1_-_167523043 NM_003851	111498	-	AY113189|POU2F1|5451|POU class 2 homeobox 1##BC001664|POU2F1|5451|POU class 2 homeobox 1##BC003571|POU2F1|5451|POU class 2 homeobox 1##NM_001198783|POU2F1|5451|POU class 2 homeobox 1##NM_001198786|POU2F1|5451|POU class 2 homeobox 1##NM_002697|POU2F1|5451|POU class 2 homeobox 1##AK302525|POU2F1|5451|POU class 2 homeobox 1##AK303201|POU2F1|5451|POU class 2 homeobox 1##AK308004|POU2F1|5451|POU class 2 homeobox 1##AK091438|POU2F1|5451|POU class 2 homeobox 1##BC052274|POU2F1|5451|POU class 2 homeobox 1##X13403|POU2F1|5451|POU class 2 homeobox 1##DQ893778|CD247|919|CD247 molecule##EU176191|CD247|919|CD247 molecule##X55510|CD247|919|CD247 molecule##X55511|CD247|919|CD247 molecule##X55512|CD247|919|CD247 molecule##BC025703|CD247|919|CD247 molecule##AK128376|CD247|919|CD247 molecule##AK313946|CD247|919|CD247 molecule##J04132|CD247|919|CD247 molecule##AK223325|CD247|919|CD247 molecule##NM_000734|CD247|919|CD247 molecule##NM_198053|CD247|919|CD247 molecule##DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1##NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1	1.102297	CTCF.p2:8:1.000
chr4	159651243	159651363	reg1000601.p2	16.903	+	AB528445 CR542081 DQ891562 DQ894749 TSC_hg19_v1_chr4_-_159644545 BC014893 L11667 BC030707 AK313929 NM_005038	-6775	-	TSC_hg19_v1_chr4_+_159593447 AK314803 NM_004453 BC011890 AK311435 BX538129 AK304838 S69232 EU093082 EU093083	-57909	+	TSC_hg19_v1_chr4_-_159593035 AK027539 BC065017 BC094775 NM_001008393	-58213	-	TSC_hg19_v1_chr4_+_159690177 NM_020840	38875	+	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	38982	+	AK058100 NM_152543	305029	-	CR542081|PPID|5481|peptidylprolyl isomerase D##DQ891562|PPID|5481|peptidylprolyl isomerase D##DQ894749|PPID|5481|peptidylprolyl isomerase D##BC014893|PPID|5481|peptidylprolyl isomerase D##L11667|PPID|5481|peptidylprolyl isomerase D##BC030707|PPID|5481|peptidylprolyl isomerase D##AK313929|PPID|5481|peptidylprolyl isomerase D##NM_005038|PPID|5481|peptidylprolyl isomerase D##AK314803|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##NM_004453|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BC011890|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BX538129|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##AK304838|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##S69232|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093082|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093083|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##AK027539|C4orf46|201725|chromosome 4 open reading frame 46##BC065017|C4orf46|201725|chromosome 4 open reading frame 46##BC094775|C4orf46|201725|chromosome 4 open reading frame 46##NM_001008393|C4orf46|201725|chromosome 4 open reading frame 46##NM_020840|FNIP2|57600|folliculin interacting protein 2##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45	0.885928	CTCF.p2:-5:0.886
chr6	155495955	155496091	reg1001109.p1	16.899	+	NM_012454	-84601	+	TSC_hg19_v1_chr6_+_155054812 AB029039	-441198	+	AK295651 AK303001 AK307815 TSC_hg19_v1_chr6_+_155054549 BC032728	-441469	+	NM_001010927 AK299723 BC066979 AF120324 BC022469	42105	+	BC020838 NM_001001346	89123	+	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	139562	-	NM_012454|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AB029039|SCAF8|22828|SR-related CTD-associated factor 8##AK295651|SCAF8|22828|SR-related CTD-associated factor 8##AK303001|SCAF8|22828|SR-related CTD-associated factor 8##AK307815|SCAF8|22828|SR-related CTD-associated factor 8##BC032728|SCAF8|22828|SR-related CTD-associated factor 8##NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC020838|CLDN20|49861|claudin 20##NM_001001346|CLDN20|49861|claudin 20##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial	0.696393	CTCF.p2:10:0.696
chr15	49154169	49154286	reg1000926.p1	16.897	+	BC117182 TSC_hg19_v1_chr15_-_49103277 AB020719 BC069186 AK303805 BX648822 BC107721 NM_001194998 NM_014985	-50965	-	TSC_hg19_v1_chr15_-_48937907 BC146854 AK304737 BC094721 NM_000138 X63556	-216298	-	TSC_hg19_v1_chr15_-_48937070 L13923	-217144	-	TSC_hg19_v1_chr15_+_49170330 NM_014335 BC114944 BC114946 AK315365 AF092135 AF109873 AF349444 AK098383 AL109701 BC024151 AL357456 BC007944 AB527924 AF274951	16145	+	BC033907 NM_203349	101413	-	CU689588 AB385300 TSC_hg19_v1_chr15_-_49338644 D87445 AK307480 AK308183 BC008635 BC033001 NM_001193489 NM_014701	184409	-	BC117182|CEP152|22995|centrosomal protein 152kDa##AB020719|CEP152|22995|centrosomal protein 152kDa##BC069186|CEP152|22995|centrosomal protein 152kDa##AK303805|CEP152|22995|centrosomal protein 152kDa##BX648822|CEP152|22995|centrosomal protein 152kDa##BC107721|CEP152|22995|centrosomal protein 152kDa##NM_001194998|CEP152|22995|centrosomal protein 152kDa##NM_014985|CEP152|22995|centrosomal protein 152kDa##BC146854|FBN1|2200|fibrillin 1##AK304737|FBN1|2200|fibrillin 1##BC094721|FBN1|2200|fibrillin 1##NM_000138|FBN1|2200|fibrillin 1##X63556|FBN1|2200|fibrillin 1##L13923|FBN1|2200|fibrillin 1##NM_014335|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114946|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK315365|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF092135|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF109873|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF349444|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK098383|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL109701|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC024151|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL357456|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC007944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##D87445|SECISBP2L|9728|SECIS binding protein 2-like##AK307480|SECISBP2L|9728|SECIS binding protein 2-like##AK308183|SECISBP2L|9728|SECIS binding protein 2-like##BC008635|SECISBP2L|9728|SECIS binding protein 2-like##BC033001|SECISBP2L|9728|SECIS binding protein 2-like##NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like##NM_014701|SECISBP2L|9728|SECIS binding protein 2-like	0.995217	CTCF.p2:-18:0.995
chr22	26857300	26857417	reg1000845.p1	16.896	+	TSC_hg19_v1_chr22_+_26825246 NM_020437 BC036753 AK315112	-32034	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	-291695	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	-291861	+	AK097886 BC035614 AK054717 AL365512 NM_152841	18105	-	TSC_hg19_v1_chr22_-_26879750 AK057648 AK290211	22384	-	TSC_hg19_v1_chr22_-_26879788 AL713795 BC050285 AB051454 BC028625 NM_022081	22432	-	NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4##BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4##AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4##AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4##NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4##AK057648|HPS4|89781|Hermansky-Pudlak syndrome 4##AK290211|HPS4|89781|Hermansky-Pudlak syndrome 4##AL713795|HPS4|89781|Hermansky-Pudlak syndrome 4##BC050285|HPS4|89781|Hermansky-Pudlak syndrome 4##AB051454|HPS4|89781|Hermansky-Pudlak syndrome 4##BC028625|HPS4|89781|Hermansky-Pudlak syndrome 4##NM_022081|HPS4|89781|Hermansky-Pudlak syndrome 4	0.988734	CTCF.p2:10:0.989
chr17	37139506	37139650	reg1001478.p1	16.894	+	BC140879 BC140880 NM_001008777 AY700575	-15939	-	TSC_hg19_v1_chr17_+_37026351 X82456 BC012460 DQ891539 DQ894728 AB463833 CU675705 AK289847	-113182	+	TSC_hg19_v1_chr17_+_37026313 AK295522 AK296092 AK309933 BC007560	-113264	+	EU832116 EU832210 AK312999 TSC_hg19_v1_chr17_-_37307740 AF279144 AF378753 AY704670 AY704671	168154	-	TSC_hg19_v1_chr17_-_37307863 BC036059	168269	-	TSC_hg19_v1_chr17_-_37307891 NM_020405	168317	-	BC140879|FBXO47|494188|F-box protein 47##BC140880|FBXO47|494188|F-box protein 47##NM_001008777|FBXO47|494188|F-box protein 47##AY700575|FBXO47|494188|F-box protein 47##X82456|LASP1|3927|LIM and SH3 protein 1##BC012460|LASP1|3927|LIM and SH3 protein 1##DQ891539|LASP1|3927|LIM and SH3 protein 1##DQ894728|LASP1|3927|LIM and SH3 protein 1##AK289847|LASP1|3927|LIM and SH3 protein 1##AK295522|LASP1|3927|LIM and SH3 protein 1##AK296092|LASP1|3927|LIM and SH3 protein 1##AK309933|LASP1|3927|LIM and SH3 protein 1##BC007560|LASP1|3927|LIM and SH3 protein 1##EU832116|PLXDC1|57125|plexin domain containing 1##EU832210|PLXDC1|57125|plexin domain containing 1##AK312999|PLXDC1|57125|plexin domain containing 1##AF279144|PLXDC1|57125|plexin domain containing 1##AF378753|PLXDC1|57125|plexin domain containing 1##AY704670|PLXDC1|57125|plexin domain containing 1##AY704671|PLXDC1|57125|plexin domain containing 1##BC036059|PLXDC1|57125|plexin domain containing 1##NM_020405|PLXDC1|57125|plexin domain containing 1	0.994793	CTCF.p2:-5:0.995
chr7	142491228	142491370	reg1000763.p2	16.894	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	-33973	+	NM_001190487	-117169	+	AY358487 BC035384 AK122940 NM_001001317	-533438	-	M12426 TSC_hg19_v1_chr7_+_142495248	3896	+	TSC_hg19_v1_chr7_+_142552837 NM_004445 D83492 BC015495 BC051028 BC056159	61426	+	TSC_hg19_v1_chr7_+_142560518 BC110606 BC110607	69216	+	NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##NM_004445|EPHB6|2051|EPH receptor B6##D83492|EPHB6|2051|EPH receptor B6##BC015495|EPHB6|2051|EPH receptor B6##BC051028|EPHB6|2051|EPH receptor B6##BC056159|EPHB6|2051|EPH receptor B6##BC110606|EPHB6|2051|EPH receptor B6##BC110607|EPHB6|2051|EPH receptor B6	1.093142	CTCF.p2:14:0.974
chr16	8974212	8974352	reg1001520.p1	16.891	+	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	-11422	-	NM_001042476 BC001333	-12030	-	NM_000303 TSC_hg19_v1_chr16_+_8891675 AK296123 U85773 AK300785 AK291537 AK299979 AK311035 AK312532 AK304320 AK296630 BC008310	-82584	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	83013	-	TSC_hg19_v1_chr16_+_9185545 NM_014117	211258	+	TSC_hg19_v1_chr16_+_9185577 BC113570	211321	+	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_000303|PMM2|5373|phosphomannomutase 2##U85773|PMM2|5373|phosphomannomutase 2##AK300785|PMM2|5373|phosphomannomutase 2##AK291537|PMM2|5373|phosphomannomutase 2##AK299979|PMM2|5373|phosphomannomutase 2##AK311035|PMM2|5373|phosphomannomutase 2##AK312532|PMM2|5373|phosphomannomutase 2##AK304320|PMM2|5373|phosphomannomutase 2##AK296630|PMM2|5373|phosphomannomutase 2##BC008310|PMM2|5373|phosphomannomutase 2##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##BC113570|C16orf72|29035|chromosome 16 open reading frame 72	1.028797	CTCF.p2:5:1.000
chr4	71370983	71371107	reg1000816.p2	16.891	+	NM_152291 AK093828 AK312855 BX647190 BC025688 L13283	-33160	+	NM_001145007	-33371	+	NM_001145006	-74837	+	AB593161 AY358528 NM_212557 BC121812 BC121817	13258	+	NM_016519 AF209780 AF263464 AJ537437 AF219994 AK314918 BC106931 BC106932	86961	+	AF125373 NM_031889	123415	+	NM_152291|MUC7|4589|mucin 7, secreted##AK093828|MUC7|4589|mucin 7, secreted##AK312855|MUC7|4589|mucin 7, secreted##BX647190|MUC7|4589|mucin 7, secreted##BC025688|MUC7|4589|mucin 7, secreted##L13283|MUC7|4589|mucin 7, secreted##NM_001145007|MUC7|4589|mucin 7, secreted##NM_001145006|MUC7|4589|mucin 7, secreted##AB593161|AMTN|401138|amelotin##AY358528|AMTN|401138|amelotin##NM_212557|AMTN|401138|amelotin##BC121812|AMTN|401138|amelotin##BC121817|AMTN|401138|amelotin##NM_016519|AMBN|258|ameloblastin (enamel matrix protein)##AF209780|AMBN|258|ameloblastin (enamel matrix protein)##AF263464|AMBN|258|ameloblastin (enamel matrix protein)##AJ537437|AMBN|258|ameloblastin (enamel matrix protein)##AF219994|AMBN|258|ameloblastin (enamel matrix protein)##AK314918|AMBN|258|ameloblastin (enamel matrix protein)##BC106931|AMBN|258|ameloblastin (enamel matrix protein)##BC106932|AMBN|258|ameloblastin (enamel matrix protein)##AF125373|ENAM|10117|enamelin##NM_031889|ENAM|10117|enamelin	0.9179	CTCF.p2:8:0.918
chr1	226163783	226163920	reg1000839.p2	16.887	+	U81523 BC116448 AF081513 BC035718 AK027520 AK075344 TSC_hg19_v1_chr1_-_226128921 AK304549 NM_001172425 NM_003240 BC065929	-34820	-	AK001508 AK298845 TSC_hg19_v1_chr1_-_226111979	-51872	-	BC014868 TSC_hg19_v1_chr1_-_226111970 AF087859 BC020553 NM_013328	-51900	-	BC016290 TSC_hg19_v1_chr1_-_226187017	23151	-	TSC_hg19_v1_chr1_-_226187023 AK092701 AX747679 BX648319	23171	-	TSC_hg19_v1_chr1_-_226187045 AK291008 AK127780 BC071563 AK308441	23185	-	U81523|LEFTY2|7044|left-right determination factor 2##AF081513|LEFTY2|7044|left-right determination factor 2##BC035718|LEFTY2|7044|left-right determination factor 2##AK027520|LEFTY2|7044|left-right determination factor 2##AK075344|LEFTY2|7044|left-right determination factor 2##AK304549|LEFTY2|7044|left-right determination factor 2##NM_001172425|LEFTY2|7044|left-right determination factor 2##NM_003240|LEFTY2|7044|left-right determination factor 2##BC065929|LEFTY2|7044|left-right determination factor 2##AK001508|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC014868|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##AF087859|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC020553|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##NM_013328|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC016290|C1orf55|163859|chromosome 1 open reading frame 55##AK092701|C1orf55|163859|chromosome 1 open reading frame 55##BX648319|C1orf55|163859|chromosome 1 open reading frame 55##AK291008|C1orf55|163859|chromosome 1 open reading frame 55##AK127780|C1orf55|163859|chromosome 1 open reading frame 55##BC071563|C1orf55|163859|chromosome 1 open reading frame 55##AK308441|C1orf55|163859|chromosome 1 open reading frame 55	0.999288	CTCF.p2:13:0.999
chr5	72887074	72887190	reg1001061.p1	16.884	+	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	-25550	+	BC012917 TSC_hg19_v1_chr5_-_72861465 AF251051 NM_023039	-25673	-	TSC_hg19_v1_chr5_-_72861256 AK022876	-25900	-	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	34853	+	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	222218	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	1049331	-	AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##BC012917|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AF251051|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##NM_023039|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AK022876|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)	0.999436	CTCF.p2:-13:0.999
chr11	21533524	21533646	reg1000833.p1	16.878	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	-842393	+	NM_004211 AF085412	-912638	+	BC047226 TSC_hg19_v1_chr11_+_20409261 AK301449 AK298185 AK300591 BC037544 AB590779 EU831425 EU831518	-1124325	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	681062	+	AB032435 NM_020346	826081	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	1113776	-	AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##BC047226|PRMT3|10196|protein arginine methyltransferase 3##AK301449|PRMT3|10196|protein arginine methyltransferase 3##AK298185|PRMT3|10196|protein arginine methyltransferase 3##AK300591|PRMT3|10196|protein arginine methyltransferase 3##BC037544|PRMT3|10196|protein arginine methyltransferase 3##EU831425|PRMT3|10196|protein arginine methyltransferase 3##EU831518|PRMT3|10196|protein arginine methyltransferase 3##AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F	0.999601	CTCF.p2:1:1.000
chr15	59785152	59785306	reg1000874.p1	16.876	+	TSC_hg19_v1_chr15_+_59730403 BC022537 NM_152450 AK299220 AK307975	-54879	+	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	-120159	-	TSC_hg19_v1_chr15_-_59665065 AK291688	-120163	-	TSC_hg19_v1_chr15_+_59903981 NM_004751 EF152283	118754	+	TSC_hg19_v1_chr15_+_59904093 BC017032	118877	+	TSC_hg19_v1_chr15_+_59908724 AF102542	123526	+	BC022537|FAM81A|145773|family with sequence similarity 81, member A##NM_152450|FAM81A|145773|family with sequence similarity 81, member A##AK299220|FAM81A|145773|family with sequence similarity 81, member A##AK307975|FAM81A|145773|family with sequence similarity 81, member A##BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##NM_004751|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##EF152283|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##BC017032|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##AF102542|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type	0.993892	CTCF.p2:36:0.994
chr1	95509069	95509196	reg1001270.p1	16.874	+	TSC_hg19_v1_chr1_-_95392690 S80562 BC025372 AK312370 AK298145 NM_001839	-116492	-	CR541848 CU692978 DQ893013 DQ896258 TSC_hg19_v1_chr1_-_95392498	-116659	-	TSC_hg19_v1_chr1_+_95286194 AK300193	-222933	+	TSC_hg19_v1_chr1_-_95538474 BC011706 AK289395 NM_144988	29354	-	BC108263 NM_001199679	48940	+	TSC_hg19_v1_chr1_+_95582939 NM_152487 AK056404 BC137457 BC137458 BC139737	73828	+	S80562|CNN3|1266|calponin 3, acidic##BC025372|CNN3|1266|calponin 3, acidic##AK312370|CNN3|1266|calponin 3, acidic##AK298145|CNN3|1266|calponin 3, acidic##NM_001839|CNN3|1266|calponin 3, acidic##CR541848|CNN3|1266|calponin 3, acidic##DQ893013|CNN3|1266|calponin 3, acidic##DQ896258|CNN3|1266|calponin 3, acidic##AK300193|SLC44A3|126969|solute carrier family 44, member 3##BC011706|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##AK289395|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##NM_144988|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##BC108263|TMEM56|148534|transmembrane protein 56##NM_001199679|TMEM56|148534|transmembrane protein 56##NM_152487|TMEM56|148534|transmembrane protein 56##AK056404|TMEM56|148534|transmembrane protein 56##BC137457|TMEM56|148534|transmembrane protein 56##BC137458|TMEM56|148534|transmembrane protein 56##BC139737|TMEM56|148534|transmembrane protein 56	0.993284	CTCF.p2:25:0.993
chr15	43577862	43577987	reg1001146.p1	16.870	+	AF035960 AF035961 BC119009 BC122859 NM_004245 NM_201631	-18870	-	TSC_hg19_v1_chr15_-_43513234 M30646 M30647 NM_000119 NM_001114134	-64646	-	TSC_hg19_v1_chr15_-_43513214 AK297663 M29399	-64718	-	AF363393 NM_052955	16528	-	CU677535 TSC_hg19_v1_chr15_-_43622812 AB011119 AK292587 AK300820 BC015949 NM_014793	44829	-	AK298870 NM_001012969 NM_001159280 BC075857	44973	+	AF035960|TGM5|9333|transglutaminase 5##AF035961|TGM5|9333|transglutaminase 5##BC119009|TGM5|9333|transglutaminase 5##BC122859|TGM5|9333|transglutaminase 5##NM_004245|TGM5|9333|transglutaminase 5##NM_201631|TGM5|9333|transglutaminase 5##M30646|EPB42|2038|erythrocyte membrane protein band 4.2##M30647|EPB42|2038|erythrocyte membrane protein band 4.2##NM_000119|EPB42|2038|erythrocyte membrane protein band 4.2##NM_001114134|EPB42|2038|erythrocyte membrane protein band 4.2##AK297663|EPB42|2038|erythrocyte membrane protein band 4.2##M29399|EPB42|2038|erythrocyte membrane protein band 4.2##AF363393|TGM7|116179|transglutaminase 7##NM_052955|TGM7|116179|transglutaminase 7##AK292587|LCMT2|9836|leucine carboxyl methyltransferase 2##AK300820|LCMT2|9836|leucine carboxyl methyltransferase 2##BC015949|LCMT2|9836|leucine carboxyl methyltransferase 2##NM_014793|LCMT2|9836|leucine carboxyl methyltransferase 2##AK298870|ADAL|161823|adenosine deaminase-like##NM_001012969|ADAL|161823|adenosine deaminase-like##NM_001159280|ADAL|161823|adenosine deaminase-like##BC075857|ADAL|161823|adenosine deaminase-like	0.923311	CTCF.p2:19:0.923
chr14	70193777	70193909	reg1000557.p2	16.869	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	-115452	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	-115533	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	-242363	+	TSC_hg19_v1_chr14_+_70233809 BX640605	39963	+	BC095420 TSC_hg19_v1_chr14_+_70233810	39967	+	TSC_hg19_v1_chr14_+_70233856 AK311805 NM_001039465 NM_006925	39991	+	D87434|KIAA0247|9766|KIAA0247##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BX640605|SRSF5|6430|serine/arginine-rich splicing factor 5##BC095420|SRSF5|6430|serine/arginine-rich splicing factor 5##AK311805|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_001039465|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_006925|SRSF5|6430|serine/arginine-rich splicing factor 5	0.995195	CTCF.p2:10:0.995
chr3	8281556	8281655	reg1000646.p1	16.865	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	-1378707	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	-1378806	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-3052114	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	261725	-	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	261910	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	261976	+	X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1	0.303076	CTCF.p2:0:0.303
chr12	48109212	48109336	reg1001277.p1	16.864	+	TSC_hg19_v1_chr12_-_48099819 NM_001146075 NM_001146076 NM_024604	-9443	-	TSC_hg19_v1_chr12_-_48099814 BC003680	-9460	-	TSC_hg19_v1_chr12_-_48099790 BC056415 AK025561 AK299465	-9507	-	AK314688 BC069715 BC069698 BC074763 AX772808 AK300169 AK075446 BC111782 M32402 M36109 NM_001172439 NM_001172440 NM_006025	10015	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	43135	-	AK092448 NM_001098531	43600	-	NM_001146075|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146076|RPAP3|79657|RNA polymerase II associated protein 3##NM_024604|RPAP3|79657|RNA polymerase II associated protein 3##BC003680|RPAP3|79657|RNA polymerase II associated protein 3##BC056415|RPAP3|79657|RNA polymerase II associated protein 3##AK025561|RPAP3|79657|RNA polymerase II associated protein 3##AK299465|RPAP3|79657|RNA polymerase II associated protein 3##AK314688|ENDOU|8909|endonuclease, polyU-specific##BC069715|ENDOU|8909|endonuclease, polyU-specific##BC069698|ENDOU|8909|endonuclease, polyU-specific##BC074763|ENDOU|8909|endonuclease, polyU-specific##AX772808|ENDOU|8909|endonuclease, polyU-specific##AK300169|ENDOU|8909|endonuclease, polyU-specific##AK075446|ENDOU|8909|endonuclease, polyU-specific##BC111782|ENDOU|8909|endonuclease, polyU-specific##M32402|ENDOU|8909|endonuclease, polyU-specific##M36109|ENDOU|8909|endonuclease, polyU-specific##NM_001172439|ENDOU|8909|endonuclease, polyU-specific##NM_001172440|ENDOU|8909|endonuclease, polyU-specific##NM_006025|ENDOU|8909|endonuclease, polyU-specific##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3	0.92601	CTCF.p2:-6:0.926
chr17	73319275	73319393	reg1000842.p1	16.864	+	TSC_hg19_v1_chr17_-_73285501 AK075239 NM_001126121 NM_001126122 NM_021734	-33805	-	BC001075 BC005120 TSC_hg19_v1_chr17_-_73285471 AL833387	-33862	-	TSC_hg19_v1_chr17_-_73267265 AF225422 NM_001242498 NM_020679	-52020	-	AB385058 AF498925 CR450363 CR541942 DQ891830 DQ894923 CU674310 L29511 TSC_hg19_v1_chr17_-_73389844	70443	-	AK091010 TSC_hg19_v1_chr17_-_73401721	82310	-	TSC_hg19_v1_chr17_-_73401738 BC000631	82400	-	AK075239|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126121|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126122|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_021734|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC001075|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC005120|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AL833387|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AF225422|MIF4GD|57409|MIF4G domain containing##NM_001242498|MIF4GD|57409|MIF4G domain containing##NM_020679|MIF4GD|57409|MIF4G domain containing##AF498925|GRB2|2885|growth factor receptor-bound protein 2##CR450363|GRB2|2885|growth factor receptor-bound protein 2##CR541942|GRB2|2885|growth factor receptor-bound protein 2##DQ891830|GRB2|2885|growth factor receptor-bound protein 2##DQ894923|GRB2|2885|growth factor receptor-bound protein 2##L29511|GRB2|2885|growth factor receptor-bound protein 2##AK091010|GRB2|2885|growth factor receptor-bound protein 2##BC000631|GRB2|2885|growth factor receptor-bound protein 2	0.949077	CTCF.p2:-8:0.949
chr1	53859087	53859228	reg1001238.p1	16.862	+	TSC_hg19_v1_chr1_-_53793743 NM_001018054 NM_004631 NM_017522 NM_033300	-65376	-	Z75190 D50678 BC051836 TSC_hg19_v1_chr1_-_53793738	-65495	-	DQ891289 DQ894473 AB528424 TSC_hg19_v1_chr1_-_53704191 AF035940 BC018211 AK297895 AF067173 AK312113 NM_002370	-154956	-	AK057273 NM_033067 AJ291671	65950	+	AK302085 TSC_hg19_v1_chr1_+_53925533 BC029566	66373	+	AK090634 AX746550 NM_147193	340719	-	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##DQ891289|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##DQ894473|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF035940|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##BC018211|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK297895|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF067173|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK312113|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##NM_002370|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1	0.999877	CTCF.p2:14:1.000
chr17	79227245	79227390	reg1001444.p1	16.856	+	BC141912 BC127837 NM_001086521 TSC_hg19_v1_chr17_+_79213151 BC079831	-14183	+	TSC_hg19_v1_chr17_-_79212892 NM_144679	-14428	-	TSC_hg19_v1_chr17_-_79212861 AK128728 BC064483 BC042155 AK056090	-14494	-	TSC_hg19_v1_chr17_-_79269071 BC014642	41749	-	TSC_hg19_v1_chr17_-_79269100 NM_001037984 NM_138570	41776	-	AK096111 NM_178520	77156	-	BC127837|C17orf89|284184|chromosome 17 open reading frame 89##NM_001086521|C17orf89|284184|chromosome 17 open reading frame 89##BC079831|C17orf89|284184|chromosome 17 open reading frame 89##NM_144679|C17orf56|146705|chromosome 17 open reading frame 56##AK128728|C17orf56|146705|chromosome 17 open reading frame 56##BC064483|C17orf56|146705|chromosome 17 open reading frame 56##BC042155|C17orf56|146705|chromosome 17 open reading frame 56##AK056090|C17orf56|146705|chromosome 17 open reading frame 56##BC014642|SLC38A10|124565|solute carrier family 38, member 10##NM_001037984|SLC38A10|124565|solute carrier family 38, member 10##NM_138570|SLC38A10|124565|solute carrier family 38, member 10##AK096111|TMEM105|284186|transmembrane protein 105##NM_178520|TMEM105|284186|transmembrane protein 105	0.999824	CTCF.p2:-13:1.000
chr3	52325592	52325736	reg1001467.p1	16.854	+	TSC_hg19_v1_chr3_+_52321862 BC042151 BC021896	-3790	+	AF448855 AY172690 BC036862 NM_001144951 NM_145262 TSC_hg19_v1_chr3_+_52321852 AK074215	-3821	+	TSC_hg19_v1_chr3_-_52312656 NM_025222	-13008	-	AB037831 AB290163 NM_015512	24670	+	CU674778 D88812 DQ892545 DQ895756 AF045581 TSC_hg19_v1_chr3_-_52443999 BC001596 NM_004656	118290	-	TSC_hg19_v1_chr3_-_52444016 D87462	118352	-	BC042151|GLYCTK|132158|glycerate kinase##BC021896|GLYCTK|132158|glycerate kinase##AF448855|GLYCTK|132158|glycerate kinase##AY172690|GLYCTK|132158|glycerate kinase##BC036862|GLYCTK|132158|glycerate kinase##NM_001144951|GLYCTK|132158|glycerate kinase##NM_145262|GLYCTK|132158|glycerate kinase##AK074215|GLYCTK|132158|glycerate kinase##NM_025222|WDR82|80335|WD repeat domain 82##AB037831|DNAH1|25981|dynein, axonemal, heavy chain 1##AB290163|DNAH1|25981|dynein, axonemal, heavy chain 1##NM_015512|DNAH1|25981|dynein, axonemal, heavy chain 1##D88812|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##DQ892545|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##DQ895756|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##AF045581|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##BC001596|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##NM_004656|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##D87462|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)	1.077729	CTCF.p2:-21:0.890
chr1	175124139	175124265	reg1001058.p1	16.853	+	AK127044 NM_022093	-87209	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-131631	-	TSC_hg19_v1_chr1_+_174969165 BC005865 AK294042 AF314752 BC022352 AL035305 AF057356 BC067823 BC078151 AF275803 AY423723	-154992	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	37828	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	588508	-	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	1051963	-	AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK294042|CACYBP|27101|calcyclin binding protein##AF314752|CACYBP|27101|calcyclin binding protein##BC022352|CACYBP|27101|calcyclin binding protein##AL035305|CACYBP|27101|calcyclin binding protein##AF057356|CACYBP|27101|calcyclin binding protein##BC067823|CACYBP|27101|calcyclin binding protein##BC078151|CACYBP|27101|calcyclin binding protein##AF275803|CACYBP|27101|calcyclin binding protein##AY423723|CACYBP|27101|calcyclin binding protein##D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2	0.999924	CTCF.p2:-13:1.000
chr16	21095268	21095381	reg1000497.p2	16.852	+	TSC_hg19_v1_chr16_+_20912407 BC017039	-182916	+	AK311415 NM_001128301 NM_001128302 TSC_hg19_v1_chr16_+_20912121 AK311881	-183203	+	BX648998 NM_173475 TSC_hg19_v1_chr16_-_20911681 BC040442 BX648185	-183674	-	NM_020422 TSC_hg19_v1_chr16_+_21169994 AK074667 AK293557 BC015812	74658	+	AF494040 NM_017539	75437	-	BC096304 BC096305 BC096306 BC096307 M90366 NM_003460 AK313003 AK293805 AK308820	127556	-	BC017039|LYRM1|57149|LYR motif containing 1##AK311415|LYRM1|57149|LYR motif containing 1##NM_001128301|LYRM1|57149|LYR motif containing 1##NM_001128302|LYRM1|57149|LYR motif containing 1##AK311881|LYRM1|57149|LYR motif containing 1##BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_020422|TMEM159|57146|transmembrane protein 159##AK074667|TMEM159|57146|transmembrane protein 159##AK293557|TMEM159|57146|transmembrane protein 159##BC015812|TMEM159|57146|transmembrane protein 159##AF494040|DNAH3|55567|dynein, axonemal, heavy chain 3##NM_017539|DNAH3|55567|dynein, axonemal, heavy chain 3##BC096304|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096305|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096306|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096307|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##M90366|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##NM_003460|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK313003|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK293805|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK308820|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)	0.961137	CTCF.p2:4:0.961
chr20	62751880	62752014	reg1000835.p2	16.852	+	BC067481 BC067482 BC067483 CU688304 CU688306 NM_005286	-13764	-	BC038433 NM_001200019	-35579	+	BC036837 NM_001007125	-36236	-	TSC_hg19_v1_chr20_+_62795804 BC018917	43843	+	AB020642 NM_004535 TSC_hg19_v1_chr20_+_62795840	43886	+	TSC_hg19_v1_chr20_+_62887100 NM_001104925 NM_018257 BC040945 BC032332 AK001745 BC045775	135214	+	BC067481|NPBWR2|2832|neuropeptides B/W receptor 2##BC067482|NPBWR2|2832|neuropeptides B/W receptor 2##BC067483|NPBWR2|2832|neuropeptides B/W receptor 2##NM_005286|NPBWR2|2832|neuropeptides B/W receptor 2##BC038433|OPRL1|4987|opiate receptor-like 1##NM_001200019|OPRL1|4987|opiate receptor-like 1##BC036837|C20orf201|198437|chromosome 20 open reading frame 201##NM_001007125|C20orf201|198437|chromosome 20 open reading frame 201##BC018917|MYT1|4661|myelin transcription factor 1##AB020642|MYT1|4661|myelin transcription factor 1##NM_004535|MYT1|4661|myelin transcription factor 1##NM_001104925|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##NM_018257|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC040945|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC032332|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##AK001745|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC045775|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	0.298169	CTCF.p2:19:0.298
chr10	91020258	91020387	reg1001044.p1	16.851	+	TSC_hg19_v1_chr10_-_91011616 BC012287 X76488 NM_000235 NM_001127605	-8700	-	AK130882 TSC_hg19_v1_chr10_-_91011565	-8755	-	U08464 Z31690 TSC_hg19_v1_chr10_-_91011533 AK222760 AK290241 AK297079 AK314665 M74775	-8792	-	NM_001547 AK312831 BC005987 BC032839 TSC_hg19_v1_chr10_+_91061802 AK300431	41433	+	NM_001549 AK290427 AF083470 AK312675 U52513 TSC_hg19_v1_chr10_+_91087771	67364	+	NM_001031683 AK297137 AF026939 BC001383 BC004977	71961	+	BC012287|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##X76488|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_000235|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_001127605|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK130882|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##U08464|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##Z31690|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK222760|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK290241|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK297079|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK314665|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##M74775|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_001547|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##AK312831|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##BC005987|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##BC032839|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##AK300431|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##NM_001549|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK290427|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AF083470|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK312675|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##U52513|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	0.999923	CTCF.p2:-30:1.000
chr1	20478933	20479054	reg1000704.p2	16.851	+	AK093645 AX748240 BX647458 NM_022819 AB528809	-13125	+	AB590095 AM392918 AM392954 AM392977 AM393597 AM393824 BC025706 NM_012400 AF112982 AY358606 AK290406 AF188625 AK310156 AK311903 AK301396	-32969	-	TSC_hg19_v1_chr1_+_20396654 NM_000929 BC036792 U03090	-82249	+	TSC_hg19_v1_chr1_+_20480706 BC041651	1770	+	NM_001105572	22693	-	BC047428 NM_152376 BX648631 AK058158 TSC_hg19_v1_chr1_+_20512591	33591	+	AK093645|PLA2G2F|64600|phospholipase A2, group IIF##BX647458|PLA2G2F|64600|phospholipase A2, group IIF##NM_022819|PLA2G2F|64600|phospholipase A2, group IIF##AM392918|PLA2G2D|26279|phospholipase A2, group IID##AM392954|PLA2G2D|26279|phospholipase A2, group IID##AM392977|PLA2G2D|26279|phospholipase A2, group IID##AM393597|PLA2G2D|26279|phospholipase A2, group IID##AM393824|PLA2G2D|26279|phospholipase A2, group IID##BC025706|PLA2G2D|26279|phospholipase A2, group IID##NM_012400|PLA2G2D|26279|phospholipase A2, group IID##AF112982|PLA2G2D|26279|phospholipase A2, group IID##AY358606|PLA2G2D|26279|phospholipase A2, group IID##AK290406|PLA2G2D|26279|phospholipase A2, group IID##AF188625|PLA2G2D|26279|phospholipase A2, group IID##AK310156|PLA2G2D|26279|phospholipase A2, group IID##AK311903|PLA2G2D|26279|phospholipase A2, group IID##AK301396|PLA2G2D|26279|phospholipase A2, group IID##NM_000929|PLA2G5|5322|phospholipase A2, group V##BC036792|PLA2G5|5322|phospholipase A2, group V##U03090|PLA2G5|5322|phospholipase A2, group V##NM_001105572|PLA2G2C|391013|phospholipase A2, group IIC##BC047428|UBXN10|127733|UBX domain protein 10##NM_152376|UBXN10|127733|UBX domain protein 10##BX648631|UBXN10|127733|UBX domain protein 10##AK058158|UBXN10|127733|UBX domain protein 10	0.9652	CTCF.p2:17:0.965
chrX	70398894	70399036	reg1001504.p1	16.851	+	TSC_hg19_v1_chrX_+_70364730 BC051715	-34225	+	TSC_hg19_v1_chrX_+_70364710 AF217411 AX773948 AX773949	-34252	+	NM_001166660 NM_018977 NM_181303 BX641059 TSC_hg19_v1_chrX_+_70364698 BC028738 AK299669	-34276	+	TSC_hg19_v1_chrX_+_70435056 NM_001097642	36089	+	TSC_hg19_v1_chrX_+_70435092 BC039198 X04325	36130	+	NM_000166 BC022426 AK313474 BC002805	44135	+	BC051715|NLGN3|54413|neuroligin 3##AF217411|NLGN3|54413|neuroligin 3##NM_001166660|NLGN3|54413|neuroligin 3##NM_018977|NLGN3|54413|neuroligin 3##NM_181303|NLGN3|54413|neuroligin 3##BX641059|NLGN3|54413|neuroligin 3##BC028738|NLGN3|54413|neuroligin 3##AK299669|NLGN3|54413|neuroligin 3##NM_001097642|GJB1|2705|gap junction protein, beta 1, 32kDa##BC039198|GJB1|2705|gap junction protein, beta 1, 32kDa##X04325|GJB1|2705|gap junction protein, beta 1, 32kDa##NM_000166|GJB1|2705|gap junction protein, beta 1, 32kDa##BC022426|GJB1|2705|gap junction protein, beta 1, 32kDa##AK313474|GJB1|2705|gap junction protein, beta 1, 32kDa##BC002805|GJB1|2705|gap junction protein, beta 1, 32kDa	0.998956	CTCF.p2:12:0.999
chr15	89560922	89561061	reg1001408.p1	16.848	+	BC003610 AK095908 AK222735 AK223182 AK304627 AK310357 AK312640 U58516 AY141974 TSC_hg19_v1_chr15_-_89456611 NM_001114614 NM_005928	-104352	-	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	-104431	-	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	-122193	-	NM_007011 NM_152924	70389	+	TSC_hg19_v1_chr15_+_89631652 BC090052 AF546700 BC019248	70657	+	TSC_hg19_v1_chr15_+_89631708 AL110291 AK222841 AK290340 AK223083 AK296827	70712	+	BC003610|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK095908|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK222735|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK223182|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK304627|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK310357|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK312640|MFGE8|4240|milk fat globule-EGF factor 8 protein##U58516|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY141974|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_001114614|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_005928|MFGE8|4240|milk fat globule-EGF factor 8 protein##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_007011|ABHD2|11057|abhydrolase domain containing 2##NM_152924|ABHD2|11057|abhydrolase domain containing 2##BC090052|ABHD2|11057|abhydrolase domain containing 2##AF546700|ABHD2|11057|abhydrolase domain containing 2##BC019248|ABHD2|11057|abhydrolase domain containing 2##AL110291|ABHD2|11057|abhydrolase domain containing 2##AK222841|ABHD2|11057|abhydrolase domain containing 2##AK290340|ABHD2|11057|abhydrolase domain containing 2##AK223083|ABHD2|11057|abhydrolase domain containing 2##AK296827|ABHD2|11057|abhydrolase domain containing 2	0.95078	CTCF.p2:-2:0.951
chr1	12184982	12185110	reg1000728.p1	16.844	+	M83554 NM_001243 BC136400 BC171762 S75768	-61502	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-105476	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-105512	+	D86042 BC063482 NM_152942 BC073839 BC141804	970	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	42015	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	42065	+	M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.950469	CTCF.p2:-27:0.950
chr1	203307686	203307791	reg1000747.p1	16.844	+	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	-33049	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-108923	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-151812	-	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	9646	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	12471	-	AK172740 TSC_hg19_v1_chr1_-_203320256	12523	-	NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.902131	CTCF.p2:-2:0.902
chr20	47521666	47521802	reg1000796.p1	16.837	+	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	-77295	-	AB037836 TSC_hg19_v1_chr20_-_47444291	-77448	-	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-1106416	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	16584	+	TSC_hg19_v1_chr20_+_47662853 BC108309 NM_001316 AF053641 U33286 AK312306 AK307965 AK297270 AK297314 AK298477 AK300589 BC109313 BC109314	141092	+	TSC_hg19_v1_chr20_+_47662875 AF053640	141154	+	AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC108309|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##NM_001316|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053641|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##U33286|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK312306|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK307965|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297270|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK298477|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK300589|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109313|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053640|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)	0.982368	CTCF.p2:21:0.982
chr18	6521936	6522054	reg1001125.p1	16.836	+	NM_001243517	-10581	+	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	-107080	-	NM_001080209	-629893	-	NM_001010000 BX648684 AK308259 AK302026	312470	+	BC144590 NM_005559 X58531	595789	-	NM_001105581	709141	+	NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001080209|TMEM200C|645369|transmembrane protein 200C##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28##BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1##NM_001105581|LRRC30|339291|leucine rich repeat containing 30	0.031069	
chr11	126860380	126860509	reg1001511.p1	16.835	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	-584446	+	NM_006278 X74570	-634349	+	TSC_hg19_v1_chr11_-_126225452 AK096370	-634981	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	10216	-	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	10281	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	12861	+	AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK096370|FLJ39051|399972|uncharacterized LOC399972##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)	0.571989	CTCF.p2:8:0.572
chr17	72957810	72957957	reg1001123.p1	16.833	+	BC143799 AB463989 NM_178233 AB593153	-25989	+	AK000063 NM_178160	-37514	+	BC101096 BC101097 BC101098 BC101099 AK091243 AK296899 AX746872 NM_173477 AK289804	-38584	-	CU690082 AB527292 TSC_hg19_v1_chr17_-_72968758	10871	-	TSC_hg19_v1_chr17_-_72968846 AK304081 BC035372 AK074401 AL137556 AK095565 BC032219 NM_030630	10965	-	TSC_hg19_v1_chr17_+_72983726 AK294006 BC047534 NM_014603	25858	+	BC143799|OTOP3|347741|otopetrin 3##NM_178233|OTOP3|347741|otopetrin 3##AB593153|OTOP3|347741|otopetrin 3##AK000063|OTOP2|92736|otopetrin 2##NM_178160|OTOP2|92736|otopetrin 2##BC101096|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101097|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101098|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101099|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK091243|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK296899|USH1G|124590|Usher syndrome 1G (autosomal recessive)##NM_173477|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK289804|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK304081|C17orf28|283987|chromosome 17 open reading frame 28##BC035372|C17orf28|283987|chromosome 17 open reading frame 28##AK074401|C17orf28|283987|chromosome 17 open reading frame 28##AL137556|C17orf28|283987|chromosome 17 open reading frame 28##AK095565|C17orf28|283987|chromosome 17 open reading frame 28##BC032219|C17orf28|283987|chromosome 17 open reading frame 28##NM_030630|C17orf28|283987|chromosome 17 open reading frame 28##AK294006|CDR2L|30850|cerebellar degeneration-related protein 2-like##BC047534|CDR2L|30850|cerebellar degeneration-related protein 2-like##NM_014603|CDR2L|30850|cerebellar degeneration-related protein 2-like	0.999873	CTCF.p2:-23:1.000
chr1	84908024	84908156	reg1001267.p1	16.826	+	AF333389 NM_058248 BC080621 BC065182	-33999	+	AF274571 NM_021233 BC126136 BC126138 HQ258219	-43854	+	BC037973 NM_001134664	-139757	+	NM_025065 TSC_hg19_v1_chr1_+_84944949 AK022537 BC016051 CU677559 AF322053	36860	+	AF493873 BT006823 TSC_hg19_v1_chr1_-_84971803 AF038955	63707	-	TSC_hg19_v1_chr1_-_84971851 BC003563	63770	-	AF333389|DNASE2B|58511|deoxyribonuclease II beta##NM_058248|DNASE2B|58511|deoxyribonuclease II beta##BC080621|DNASE2B|58511|deoxyribonuclease II beta##BC065182|DNASE2B|58511|deoxyribonuclease II beta##AF274571|DNASE2B|58511|deoxyribonuclease II beta##NM_021233|DNASE2B|58511|deoxyribonuclease II beta##BC126136|DNASE2B|58511|deoxyribonuclease II beta##BC126138|DNASE2B|58511|deoxyribonuclease II beta##HQ258219|DNASE2B|58511|deoxyribonuclease II beta##BC037973|SAMD13|148418|sterile alpha motif domain containing 13##NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13##NM_025065|RPF1|80135|ribosome production factor 1 homolog (S. cerevisiae)##AK022537|RPF1|80135|ribosome production factor 1 homolog (S. cerevisiae)##BC016051|RPF1|80135|ribosome production factor 1 homolog (S. cerevisiae)##AF322053|RPF1|80135|ribosome production factor 1 homolog (S. cerevisiae)##AF493873|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##BT006823|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AF038955|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##BC003563|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5	0.057046	
chr19	6218629	6218743	reg1001115.p1	16.826	+	TSC_hg19_v1_chr19_-_6199558 AK056073	-19139	-	AY009107 BC022027 AK093433 AX748123 AK302604 AJ577571 NM_030924 BC090046 AL136854	-82933	+	TSC_hg19_v1_chr19_-_6110613 BC028579 AK303321 NM_000635 NM_134433	-108074	-	AB463904 TSC_hg19_v1_chr19_-_6279803	61117	-	TSC_hg19_v1_chr19_-_6279967 D14539 NM_005934	61279	-	AF347024 BC112122 BC112124 NM_133492	114914	-	AY009107|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC022027|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK093433|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK302604|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AJ577571|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##NM_030924|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC090046|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AL136854|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC028579|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK303321|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_000635|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_134433|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##D14539|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1##NM_005934|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1##AF347024|ACER1|125981|alkaline ceramidase 1##BC112122|ACER1|125981|alkaline ceramidase 1##BC112124|ACER1|125981|alkaline ceramidase 1##NM_133492|ACER1|125981|alkaline ceramidase 1	0.999889	CTCF.p2:-10:1.000
chr22	45664975	45665090	reg1000818.p1	16.822	+	TSC_hg19_v1_chr22_-_45636776 AK094937	-28258	-	CU012960 CU013248 CR456402 TSC_hg19_v1_chr22_-_45636622 NM_001009880	-28416	-	AK315883 AK297058 TSC_hg19_v1_chr22_-_45609417	-55664	-	TSC_hg19_v1_chr22_+_45680833 AF085808 BC069544 NM_001167574 NM_006953 BC108900 CR456608 AB010637 AB528272 CU013204 CU013492	15828	+	TSC_hg19_v1_chr22_+_45704858 AK125027 NM_001104595	39918	+	TSC_hg19_v1_chr22_+_45705838 NM_017911 AK000642	40782	+	AK094937|KIAA0930|23313|KIAA0930##CU012960|KIAA0930|23313|KIAA0930##CU013248|KIAA0930|23313|KIAA0930##CR456402|KIAA0930|23313|KIAA0930##NM_001009880|KIAA0930|23313|KIAA0930##AK315883|KIAA0930|23313|KIAA0930##AK297058|KIAA0930|23313|KIAA0930##AF085808|UPK3A|7380|uroplakin 3A##BC069544|UPK3A|7380|uroplakin 3A##NM_001167574|UPK3A|7380|uroplakin 3A##NM_006953|UPK3A|7380|uroplakin 3A##BC108900|UPK3A|7380|uroplakin 3A##CR456608|UPK3A|7380|uroplakin 3A##AB010637|UPK3A|7380|uroplakin 3A##CU013204|UPK3A|7380|uroplakin 3A##CU013492|UPK3A|7380|uroplakin 3A##AK125027|FAM118A|55007|family with sequence similarity 118, member A##NM_001104595|FAM118A|55007|family with sequence similarity 118, member A##NM_017911|FAM118A|55007|family with sequence similarity 118, member A##AK000642|FAM118A|55007|family with sequence similarity 118, member A	0.988555	CTCF.p2:25:0.989
chr20	49077415	49077537	reg1001256.p1	16.821	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	-269846	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	-270095	+	NM_005194 TSC_hg19_v1_chr20_+_48807197	-270283	+	TSC_hg19_v1_chr20_+_49126895 AK290638 NM_002827	49400	+	TSC_hg19_v1_chr20_+_49126916 AK316563	49437	+	AK299830 TSC_hg19_v1_chr20_+_49126919	49443	+	EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK290638|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##NM_002827|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK316563|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1	0.988445	CTCF.p2:-2:0.988
chr14	24766154	24766286	reg1001181.p1	16.820	+	TSC_hg19_v1_chr14_-_24740802 NM_182836	-25423	-	TSC_hg19_v1_chr14_-_24740785 AK291347	-25437	-	TSC_hg19_v1_chr14_-_24740748 NM_004581 BC003093	-25462	-	AK058159 NM_138452	2445	-	BC015943 AL833917 BC014057 TSC_hg19_v1_chr14_-_24768965 BX247980 AF418205 NM_001136050	2719	-	TSC_hg19_v1_chr14_+_24769078 AB095941 BC025332 BX647311 BX248018 NM_174913	2867	+	NM_182836|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##AK291347|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##NM_004581|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##BC003093|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##AK058159|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##NM_138452|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##BC015943|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##AL833917|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##BC014057|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##BX247980|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##AF418205|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##NM_001136050|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##AB095941|C14orf21|161424|chromosome 14 open reading frame 21##BC025332|C14orf21|161424|chromosome 14 open reading frame 21##BX647311|C14orf21|161424|chromosome 14 open reading frame 21##BX248018|C14orf21|161424|chromosome 14 open reading frame 21##NM_174913|C14orf21|161424|chromosome 14 open reading frame 21	0.994428	CTCF.p2:17:0.994
chr7	5526640	5526743	reg1000527.p2	16.818	+	NM_001080495	-63515	-	AY129022 TSC_hg19_v1_chr7_-_5461555	-65150	-	TSC_hg19_v1_chr7_-_5460842 BC140723	-65785	-	CU692902 TSC_hg19_v1_chr7_-_5553380 AK057042 BC006426 BC024256 NM_024963	26660	-	TSC_hg19_v1_chr7_-_5553435 AK130444 AK294949	26736	-	M28424 V00478 TSC_hg19_v1_chr7_-_5567980 HQ154074 DQ407611 EF036500	41321	-	NM_001080495|TNRC18|84629|trinucleotide repeat containing 18##AY129022|TNRC18|84629|trinucleotide repeat containing 18##AK057042|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC006426|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC024256|FBXL18|80028|F-box and leucine-rich repeat protein 18##NM_024963|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK130444|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK294949|FBXL18|80028|F-box and leucine-rich repeat protein 18##M28424|ACTB|60|actin, beta##V00478|ACTB|60|actin, beta##DQ407611|ACTB|60|actin, beta##EF036500|ACTB|60|actin, beta	0.995943	CTCF.p2:7:0.996
chr14	61028989	61029118	reg1001252.p1	16.817	+	BC065831 NM_007374 BC087852 BC069413 AJ011785 EU446644	-53027	+	BC125070 BC125071 AK098187 NM_174978 AL832219	-76280	-	TSC_hg19_v1_chr14_+_60716314 AY236965	-312735	+	BT007083 CU679159 TSC_hg19_v1_chr14_-_61116196 BC008874 NM_005982 X91868	87037	-	AF032107 TSC_hg19_v1_chr14_-_61190584 BC098135 BC098282 BC099722 BC101934 EU446619 EU446844 NM_017420	161601	-	TSC_hg19_v1_chr14_-_61191035 AK309358	162004	-	BC065831|SIX6|4990|SIX homeobox 6##NM_007374|SIX6|4990|SIX homeobox 6##BC087852|SIX6|4990|SIX homeobox 6##BC069413|SIX6|4990|SIX homeobox 6##AJ011785|SIX6|4990|SIX homeobox 6##EU446644|SIX6|4990|SIX homeobox 6##BC125070|C14orf39|317761|chromosome 14 open reading frame 39##BC125071|C14orf39|317761|chromosome 14 open reading frame 39##AK098187|C14orf39|317761|chromosome 14 open reading frame 39##NM_174978|C14orf39|317761|chromosome 14 open reading frame 39##AL832219|C14orf39|317761|chromosome 14 open reading frame 39##AY236965|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BT007083|SIX1|6495|SIX homeobox 1##BC008874|SIX1|6495|SIX homeobox 1##NM_005982|SIX1|6495|SIX homeobox 1##X91868|SIX1|6495|SIX homeobox 1##AF032107|SIX4|51804|SIX homeobox 4##BC098135|SIX4|51804|SIX homeobox 4##BC098282|SIX4|51804|SIX homeobox 4##BC099722|SIX4|51804|SIX homeobox 4##BC101934|SIX4|51804|SIX homeobox 4##EU446619|SIX4|51804|SIX homeobox 4##EU446844|SIX4|51804|SIX homeobox 4##NM_017420|SIX4|51804|SIX homeobox 4##AK309358|SIX4|51804|SIX homeobox 4	0.565066	CTCF.p2:11:0.237	CTCF.p2:-28:0.303
chr20	39724130	39724261	reg1001108.p1	16.817	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	-66531	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	-66701	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-406318	-	TSC_hg19_v1_chr20_+_39765861 AB210028	41667	+	TSC_hg19_v1_chr20_+_39766146 NM_002660 NM_182811 BC136466 BC144136 M34667	41993	+	TSC_hg19_v1_chr20_-_39766625 BC035080	42413	-	BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##AB210028|PLCG1|5335|phospholipase C, gamma 1##NM_002660|PLCG1|5335|phospholipase C, gamma 1##NM_182811|PLCG1|5335|phospholipase C, gamma 1##BC136466|PLCG1|5335|phospholipase C, gamma 1##BC144136|PLCG1|5335|phospholipase C, gamma 1##M34667|PLCG1|5335|phospholipase C, gamma 1	0.875014	CTCF.p2:8:0.875
chr12	117463465	117463605	reg1000813.p1	16.816	+	TSC_hg19_v1_chr12_+_117348781 BC037296 NM_012174 NM_153348 AK289621 AF176707 BC075823	-114749	+	NM_003806 U76376	-144304	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	-287416	+	DQ894644 TSC_hg19_v1_chr12_-_117537222 AF443207 BC015221 NM_001168325 NM_017899 AK000614	73728	-	AL136899 TSC_hg19_v1_chr12_-_117628277 BC091496 AF174601 AB020682 AK001699 AK314573 BC034045 BC042333 AK308141 NM_015002 NM_033624	164690	-	NM_001204213	279321	-	BC037296|FBXW8|26259|F-box and WD repeat domain containing 8##NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8##NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8##AK289621|FBXW8|26259|F-box and WD repeat domain containing 8##AF176707|FBXW8|26259|F-box and WD repeat domain containing 8##NM_003806|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##U76376|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2##DQ894644|TESC|54997|tescalcin##AF443207|TESC|54997|tescalcin##BC015221|TESC|54997|tescalcin##NM_001168325|TESC|54997|tescalcin##NM_017899|TESC|54997|tescalcin##AK000614|TESC|54997|tescalcin##AL136899|FBXO21|23014|F-box protein 21##BC091496|FBXO21|23014|F-box protein 21##AF174601|FBXO21|23014|F-box protein 21##AB020682|FBXO21|23014|F-box protein 21##AK001699|FBXO21|23014|F-box protein 21##AK314573|FBXO21|23014|F-box protein 21##BC034045|FBXO21|23014|F-box protein 21##BC042333|FBXO21|23014|F-box protein 21##AK308141|FBXO21|23014|F-box protein 21##NM_015002|FBXO21|23014|F-box protein 21##NM_033624|FBXO21|23014|F-box protein 21##NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)	1.067221	CTCF.p2:-5:0.999
chr7	26404822	26404952	reg1000864.p1	16.815	+	AK309162 NM_001199838	-943	+	NM_001199837 AK307905	-4359	+	TSC_hg19_v1_chr7_+_26331633 BC031050 AK312850 AK296142	-73240	+	TSC_hg19_v1_chr7_+_26438248 AK056484	33375	+	AK093321 AX748054 NM_001145531	272602	+	AF072166 AJ004886 AB528968 DQ892896 DQ896144 AB014486 TSC_hg19_v1_chr7_-_26904210 BC002893 AK222885 AK313209 BC036044 AF051323 NM_003930	499306	-	AK309162|SNX10|29887|sorting nexin 10##NM_001199838|SNX10|29887|sorting nexin 10##NM_001199837|SNX10|29887|sorting nexin 10##AK307905|SNX10|29887|sorting nexin 10##BC031050|SNX10|29887|sorting nexin 10##AK312850|SNX10|29887|sorting nexin 10##AK296142|SNX10|29887|sorting nexin 10##AK056484|LOC441204|441204|uncharacterized LOC441204##AK093321|C7orf71|285941|chromosome 7 open reading frame 71##NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71##AF072166|SKAP2|8935|src kinase associated phosphoprotein 2##AJ004886|SKAP2|8935|src kinase associated phosphoprotein 2##DQ892896|SKAP2|8935|src kinase associated phosphoprotein 2##DQ896144|SKAP2|8935|src kinase associated phosphoprotein 2##AB014486|SKAP2|8935|src kinase associated phosphoprotein 2##BC002893|SKAP2|8935|src kinase associated phosphoprotein 2##AK222885|SKAP2|8935|src kinase associated phosphoprotein 2##AK313209|SKAP2|8935|src kinase associated phosphoprotein 2##BC036044|SKAP2|8935|src kinase associated phosphoprotein 2##AF051323|SKAP2|8935|src kinase associated phosphoprotein 2##NM_003930|SKAP2|8935|src kinase associated phosphoprotein 2	0.92743	CTCF.p2:37:0.927
chr12	68617042	68617185	reg1001308.p1	16.811	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	-63691	-	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	-574490	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-953683	+	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	2439	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	30191	-	TSC_hg19_v1_chr12_-_68726142 BC010622 AK297311 BC034945 BC022042 AF267851 BC028355 AK314461 NM_001205028 NM_001205029 NM_017440 NM_020128	108993	-	X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22##BC010622|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK297311|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC034945|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC022042|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AF267851|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC028355|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK314461|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205028|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205029|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_017440|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_020128|MDM1|56890|Mdm1 nuclear protein homolog (mouse)	0.878224	CTCF.p2:-16:0.878
chrX	99940831	99940943	reg1000693.p1	16.810	+	BC020733 TSC_hg19_v1_chrX_+_99899388	-41492	+	NM_014467 TSC_hg19_v1_chrX_+_99899195 AK075462 AF060567 AF393649	-41655	+	BT006977 CR457115 AB527646 DQ890668 DQ893849 TSC_hg19_v1_chrX_-_99891804 AF053453 AK299176 AF133426 AK309581 AY358825 AB097016 AF043906 U84895 BC012389 NM_003270 AK075072 AB209876 AK315773 AK300852	-49119	-	AK313086 BC014913 TSC_hg19_v1_chrX_-_99986519 NM_001174068 NM_080737	45624	-	TSC_hg19_v1_chrX_-_99987103 BX537410 AK292588 AK094110 NM_001129896	46216	-	NM_001325 TSC_hg19_v1_chrX_+_100075379	134477	+	BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2##NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2##BT006977|TSPAN6|7105|tetraspanin 6##CR457115|TSPAN6|7105|tetraspanin 6##DQ890668|TSPAN6|7105|tetraspanin 6##DQ893849|TSPAN6|7105|tetraspanin 6##AF053453|TSPAN6|7105|tetraspanin 6##AK299176|TSPAN6|7105|tetraspanin 6##AF133426|TSPAN6|7105|tetraspanin 6##AK309581|TSPAN6|7105|tetraspanin 6##AY358825|TSPAN6|7105|tetraspanin 6##AB097016|TSPAN6|7105|tetraspanin 6##AF043906|TSPAN6|7105|tetraspanin 6##U84895|TSPAN6|7105|tetraspanin 6##BC012389|TSPAN6|7105|tetraspanin 6##NM_003270|TSPAN6|7105|tetraspanin 6##AK075072|TSPAN6|7105|tetraspanin 6##AB209876|TSPAN6|7105|tetraspanin 6##AK315773|TSPAN6|7105|tetraspanin 6##AK300852|TSPAN6|7105|tetraspanin 6##AK313086|SYTL4|94121|synaptotagmin-like 4##BC014913|SYTL4|94121|synaptotagmin-like 4##NM_001174068|SYTL4|94121|synaptotagmin-like 4##NM_080737|SYTL4|94121|synaptotagmin-like 4##BX537410|SYTL4|94121|synaptotagmin-like 4##AK292588|SYTL4|94121|synaptotagmin-like 4##NM_001129896|SYTL4|94121|synaptotagmin-like 4##NM_001325|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa	1.361327	CTCF.p2:-20:0.999	CTCF.p2:38:0.362
chr17	30169664	30169786	reg1000789.p1	16.807	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-354664	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-450861	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-451058	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	16546	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	58941	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	59006	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.999844	CTCF.p2:24:1.000
chr12	124805634	124805766	reg1001208.p1	16.803	+	AK126577 NM_181709	-31991	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-347971	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-348501	-	TSC_hg19_v1_chr12_-_125002875 BC033087	197159	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	246375	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	542605	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.647816	CTCF.p2:14:0.228	CTCF.p2:-106:0.230
chr7	826158	826292	reg1001207.p1	16.802	+	BC026734 NM_001164758 NM_001164759	-58926	-	TSC_hg19_v1_chr7_-_766907 NM_001164760	-59299	-	TSC_hg19_v1_chr7_+_766769 AK056233	-59434	+	BC013613 NM_001171946	28968	+	NM_001171944 NM_001171945 NM_025154 TSC_hg19_v1_chr7_+_856279 AK022816 AK302896 AK309120 AK022469 BX538211 BC151827 AB018353 BC152418	30057	+	BC142707 NM_001130965 AB463335 CU680640	45923	+	BC026734|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164758|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164759|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164760|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK056233|HEATR2|54919|HEAT repeat containing 2##BC013613|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171946|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171944|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171945|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_025154|SUN1|23353|Sad1 and UNC84 domain containing 1##AK022816|SUN1|23353|Sad1 and UNC84 domain containing 1##AK302896|SUN1|23353|Sad1 and UNC84 domain containing 1##AK309120|SUN1|23353|Sad1 and UNC84 domain containing 1##AK022469|SUN1|23353|Sad1 and UNC84 domain containing 1##BX538211|SUN1|23353|Sad1 and UNC84 domain containing 1##BC151827|SUN1|23353|Sad1 and UNC84 domain containing 1##AB018353|SUN1|23353|Sad1 and UNC84 domain containing 1##BC152418|SUN1|23353|Sad1 and UNC84 domain containing 1##BC142707|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001130965|SUN1|23353|Sad1 and UNC84 domain containing 1	0.995632	CTCF.p2:5:0.996
chr14	93181193	93181304	reg1001091.p1	16.800	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	-62425	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	-62612	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-201289	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	33711	-	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	79438	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	208196	+	AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)	0.999149	CTCF.p2:4:0.999
chr1	24525889	24526028	reg1001457.p1	16.799	+	AF439325 AY129151 AY129152 AY129153 AB590083 AK160364 AJ534330 AJ534331 BC101407 BC101408 BC101975 BC139722 NM_170743 NM_173064 NM_173065 TSC_hg19_v1_chr1_-_24513772 BC140872	-12183	-	AB590595 CU688622 AF286095 TSC_hg19_v1_chr1_-_24469610 AK226001 BC029273 BC014096 AK308522 AK292204 AK313971 NM_021258	-56286	-	BX647453 BX647644 BX647455 NM_152372 BC067101	-87309	-	NM_198173 NM_198174 TSC_hg19_v1_chr1_+_24645846	119870	+	AK074386 TSC_hg19_v1_chr1_+_24645958 AK315164 BC036890 NM_001195010	120026	+	AY231160 AY231161 NM_021180	123571	+	AF439325|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129151|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129152|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129153|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AK160364|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AJ534330|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AJ534331|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101407|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101408|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101975|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC139722|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_170743|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_173064|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_173065|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC140872|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AF286095|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK226001|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC029273|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC014096|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK308522|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK292204|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK313971|IL22RA1|58985|interleukin 22 receptor, alpha 1##NM_021258|IL22RA1|58985|interleukin 22 receptor, alpha 1##BX647453|MYOM3|127294|myomesin family, member 3##BX647644|MYOM3|127294|myomesin family, member 3##BX647455|MYOM3|127294|myomesin family, member 3##NM_152372|MYOM3|127294|myomesin family, member 3##BC067101|MYOM3|127294|myomesin family, member 3##NM_198173|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_198174|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK074386|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK315164|GRHL3|57822|grainyhead-like 3 (Drosophila)##BC036890|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_001195010|GRHL3|57822|grainyhead-like 3 (Drosophila)##AY231160|GRHL3|57822|grainyhead-like 3 (Drosophila)##AY231161|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_021180|GRHL3|57822|grainyhead-like 3 (Drosophila)	0.987979	CTCF.p2:-12:0.988
chr6	42629430	42629569	reg1001187.p1	16.798	+	TSC_hg19_v1_chr6_+_42531956 AY061884 CU687884	-97495	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	-97722	+	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	-97749	+	M62958 M73531 NM_000322 DQ426889	60839	-	TSC_hg19_v1_chr6_-_42713800 BT007002	84297	-	TSC_hg19_v1_chr6_-_42713833 BC020170 AK312681 U61234	84329	-	AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##M62958|PRPH2|5961|peripherin 2 (retinal degeneration, slow)##M73531|PRPH2|5961|peripherin 2 (retinal degeneration, slow)##NM_000322|PRPH2|5961|peripherin 2 (retinal degeneration, slow)##BT007002|TBCC|6903|tubulin folding cofactor C##BC020170|TBCC|6903|tubulin folding cofactor C##AK312681|TBCC|6903|tubulin folding cofactor C##U61234|TBCC|6903|tubulin folding cofactor C	0.992525	CTCF.p2:-17:0.993
chr10	129833898	129834025	reg1001226.p1	16.797	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-128506	+	TSC_hg19_v1_chr10_+_129705334 BC031078 NM_006504	-128639	+	TSC_hg19_v1_chr10_-_129691206 BC029478 NM_152311	-142754	-	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	11893	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	90567	-	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	1431510	+	AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC031078|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_006504|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC029478|CLRN3|119467|clarin 3##NM_152311|CLRN3|119467|clarin 3##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase	0.36334	CTCF.p2:-9:0.363
chrX	118650352	118650470	reg1000627.p1	16.790	+	TSC_hg19_v1_chrX_+_118602407 BC068199 J02683 BC056160 CU691128	-47977	+	NM_001152 TSC_hg19_v1_chrX_+_118602390 AK315292	-48035	+	TSC_hg19_v1_chrX_+_118533353 AK091304 AK303932 AX746905 AK292035 CU676444 AL590525	-117005	+	CU692786 TSC_hg19_v1_chrX_-_118699348 AK096297 BC023506 AK026618 AK298877 NM_001170569	48933	-	TSC_hg19_v1_chrX_-_118699373 NM_001170570 NM_022101	48973	-	TSC_hg19_v1_chrX_+_118708527 AK301675 NM_003336 NM_181762 D28459 AK313092 AK223045 AK297696 AK223064	58094	+	BC068199|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##J02683|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##BC056160|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##NM_001152|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##AK315292|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##AK091304|SLC25A43|203427|solute carrier family 25, member 43##AK303932|SLC25A43|203427|solute carrier family 25, member 43##AK292035|SLC25A43|203427|solute carrier family 25, member 43##AL590525|SLC25A43|203427|solute carrier family 25, member 43##AK096297|CXorf56|63932|chromosome X open reading frame 56##BC023506|CXorf56|63932|chromosome X open reading frame 56##AK026618|CXorf56|63932|chromosome X open reading frame 56##AK298877|CXorf56|63932|chromosome X open reading frame 56##NM_001170569|CXorf56|63932|chromosome X open reading frame 56##NM_001170570|CXorf56|63932|chromosome X open reading frame 56##NM_022101|CXorf56|63932|chromosome X open reading frame 56##AK301675|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_003336|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181762|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D28459|UBE2A|7319|ubiquitin-conjugating enzyme E2A##AK313092|UBE2A|7319|ubiquitin-conjugating enzyme E2A##AK223045|UBE2A|7319|ubiquitin-conjugating enzyme E2A##AK297696|UBE2A|7319|ubiquitin-conjugating enzyme E2A##AK223064|UBE2A|7319|ubiquitin-conjugating enzyme E2A	0.275286	CTCF.p2:-78:0.275
chr6	41336741	41336879	reg1001224.p1	16.783	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-33244	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-82386	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-140742	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	177349	+	TSC_hg19_v1_chr6_+_41514342 BC052803	177527	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	269412	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	1.215743	CTCF.p2:13:0.973	CTCF.p2:-51:0.243
chr17	76418219	76418342	reg1000948.p1	16.779	+	TSC_hg19_v1_chr17_+_76374729 AK316147 AK307874 AK296882 AK024529 AK225030 AK316405 BC108732 NM_024419 BC035662 AK297156 BC008903 BC015570 BC025951	-43550	+	TSC_hg19_v1_chr17_-_76356159 AK309756 AK314212 BC060858 NM_003955	-62123	-	BC042066 NM_001204210 NM_001204211 NM_001204212 BC148207	-190817	+	NM_173628	155195	-	AK316277 TSC_hg19_v1_chr17_-_76719649	301367	-	TSC_hg19_v1_chr17_-_76719676 AK293894	301471	-	AK316147|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK307874|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK296882|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK024529|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK225030|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK316405|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC108732|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_024419|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC035662|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK297156|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC008903|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC015570|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC025951|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK309756|SOCS3|9021|suppressor of cytokine signaling 3##AK314212|SOCS3|9021|suppressor of cytokine signaling 3##BC060858|SOCS3|9021|suppressor of cytokine signaling 3##NM_003955|SOCS3|9021|suppressor of cytokine signaling 3##BC042066|TMEM235|283999|transmembrane protein 235##NM_001204210|TMEM235|283999|transmembrane protein 235##NM_001204211|TMEM235|283999|transmembrane protein 235##NM_001204212|TMEM235|283999|transmembrane protein 235##BC148207|TMEM235|283999|transmembrane protein 235##NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17##AK316277|CYTH1|9267|cytohesin 1##AK293894|CYTH1|9267|cytohesin 1	1.772104	CTCF.p2:11:0.891	CTCF.p2:-34:0.881
chr5	169862134	169862251	reg1000892.p1	16.777	+	BC025707 NM_004137 AK313979	-45545	-	TSC_hg19_v1_chr5_+_169816493 AK311026	-45696	+	DQ148476 NM_001034838	-81312	+	TSC_hg19_v1_chr5_+_169931023 BC035032 NM_001034837 NM_014592	68843	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	348562	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	426739	+	BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##DQ148476|KCNIP1|30820|Kv channel interacting protein 1##NM_001034838|KCNIP1|30820|Kv channel interacting protein 1##BC035032|KCNIP1|30820|Kv channel interacting protein 1##NM_001034837|KCNIP1|30820|Kv channel interacting protein 1##NM_014592|KCNIP1|30820|Kv channel interacting protein 1##AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17	0.99837	CTCF.p2:-9:0.998
chr7	121187675	121187798	reg1001137.p1	16.777	+	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	-151322	-	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	-151399	-	AF169963 NM_057168	-218647	+	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	325425	+	TSC_hg19_v1_chr7_+_121513214 U88967	325485	+	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	596553	-	AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase	0.92606	CTCF.p2:13:0.926
chr19	7406082	7406222	reg1000572.p2	16.770	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	-112192	-	TSC_hg19_v1_chr19_-_7099547 AK127494	-306601	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-336437	+	TSC_hg19_v1_chr19_+_7460030 NM_015318	53855	+	TSC_hg19_v1_chr19_+_7460061 AB011093	53925	+	AK127045 NM_001130955	98421	+	BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.96073	CTCF.p2:19:0.961
chr1	24136325	24136461	reg1000761.p1	16.766	+	TSC_hg19_v1_chr1_-_24127245 BC056880 BC001273 BC050685 AK096127 AK307354 AK057302 NM_001008216	-9151	-	L41668 TSC_hg19_v1_chr1_-_24127069 NM_000403	-9401	-	AK314397 TSC_hg19_v1_chr1_-_24126033 NM_001127621	-10348	-	TSC_hg19_v1_chr1_-_24151929 BC021145 BT009792 CR456884 CU679747 DQ892083 DQ895276 L07033 BC010570 AK309129 AK300733 AK313869	15494	-	TSC_hg19_v1_chr1_-_24151934 NM_000191 NM_001166059	15555	-	CU675950 TSC_hg19_v1_chr1_-_24194781 M29877 AB074175 AK092914 AK095443 AK095455 AK225468 AK301302 AK310143 AK314649 AX747804 BC017338 AK295535 NM_000147	58416	-	BC056880|GALE|2582|UDP-galactose-4-epimerase##BC001273|GALE|2582|UDP-galactose-4-epimerase##BC050685|GALE|2582|UDP-galactose-4-epimerase##AK096127|GALE|2582|UDP-galactose-4-epimerase##AK307354|GALE|2582|UDP-galactose-4-epimerase##AK057302|GALE|2582|UDP-galactose-4-epimerase##NM_001008216|GALE|2582|UDP-galactose-4-epimerase##L41668|GALE|2582|UDP-galactose-4-epimerase##NM_000403|GALE|2582|UDP-galactose-4-epimerase##AK314397|GALE|2582|UDP-galactose-4-epimerase##NM_001127621|GALE|2582|UDP-galactose-4-epimerase##BC021145|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##BT009792|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##CR456884|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##DQ892083|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##DQ895276|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##L07033|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##BC010570|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##AK309129|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##AK300733|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##AK313869|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_000191|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_001166059|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##M29877|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AB074175|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK092914|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095443|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095455|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK225468|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK301302|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK310143|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK314649|FUCA1|2517|fucosidase, alpha-L- 1, tissue##BC017338|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK295535|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000147|FUCA1|2517|fucosidase, alpha-L- 1, tissue	0.846	CTCF.p2:-10:0.846
chr16	81437253	81437390	reg1001330.p1	16.765	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-88671	+	TSC_hg19_v1_chr16_+_81348566 AK095378 NM_022041 AF291673	-88752	+	AK296011 AF294900 AK001592 BC022269 NM_017429 BC126210 BC126212 HQ258298	-164918	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	41512	+	AY172689 NM_030629	91632	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	375576	+	BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##AK095378|GAN|8139|gigaxonin##NM_022041|GAN|8139|gigaxonin##AF291673|GAN|8139|gigaxonin##AK296011|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##AF294900|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##AK001592|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC022269|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##NM_017429|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC126210|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC126212|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##HQ258298|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.999222	CTCF.p2:-7:0.999
chr4	57666437	57666559	reg1000863.p2	16.760	+	AF492675 NM_001145460 NM_032495 NM_139212	-118640	-	BC014225 AB059410 TSC_hg19_v1_chr4_-_57522645 AF492680 AF492681 NM_001145459 NM_139211	-143920	-	AB019573 AB463756 AM393649 DQ892193 EU176669 TSC_hg19_v1_chr4_-_57522247	-144341	-	CR542135 DQ895533 EU176199 TSC_hg19_v1_chr4_-_57687883 AK312222 NM_021114 X57655 BC022514 GU727622	21367	-	TSC_hg19_v1_chr4_+_57774035 NM_005612	107557	+	TSC_hg19_v1_chr4_+_57774090 BC038985 U13879 U22680	107665	+	AF492675|HOPX|84525|HOP homeobox##NM_001145460|HOPX|84525|HOP homeobox##NM_032495|HOPX|84525|HOP homeobox##NM_139212|HOPX|84525|HOP homeobox##BC014225|HOPX|84525|HOP homeobox##AB059410|HOPX|84525|HOP homeobox##AF492680|HOPX|84525|HOP homeobox##AF492681|HOPX|84525|HOP homeobox##NM_001145459|HOPX|84525|HOP homeobox##NM_139211|HOPX|84525|HOP homeobox##AB019573|HOPX|84525|HOP homeobox##AM393649|HOPX|84525|HOP homeobox##DQ892193|HOPX|84525|HOP homeobox##EU176669|HOPX|84525|HOP homeobox##CR542135|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##DQ895533|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##EU176199|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##AK312222|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##NM_021114|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##X57655|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##BC022514|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##GU727622|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##NM_005612|REST|5978|RE1-silencing transcription factor##BC038985|REST|5978|RE1-silencing transcription factor##U13879|REST|5978|RE1-silencing transcription factor	0.98751	CTCF.p2:9:0.988
chr13	99828965	99829101	reg1000758.p1	16.753	+	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	-90342	-	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	-198743	-	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	-424128	-	AK290342 NM_001144072	23645	+	TSC_hg19_v1_chr13_-_99852951 BC043515 AK097488	23934	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	24086	+	BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9##AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AK290342|UBAC2|337867|UBA domain containing 2##NM_001144072|UBAC2|337867|UBA domain containing 2##BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2	0.983039	CTCF.p2:-30:0.983
chr17	2148165	2148300	reg1001458.p1	16.753	+	DQ187313 NM_001098202	-188675	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-189834	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-202924	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	58580	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	58808	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	59020	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.945449	CTCF.p2:9:0.945
chr10	50801208	50801345	reg1001233.p1	16.750	+	TSC_hg19_v1_chr10_-_50747117 AK291018 NM_000124	-54151	-	TSC_hg19_v1_chr10_-_50747072 BC127104 L04791	-54219	-	BC028954 AK074682 BC063690 NM_170753	-69026	-	AF305909 D82342 NM_020984	15864	+	NM_003055 U09210 BC007765 AK313094	17125	+	D82340 NM_020985 NM_020986 D82339 D82341	19882	+	AK291018|PGBD3|267004|piggyBac transposable element derived 3##NM_000124|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6##BC127104|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6##L04791|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6##BC028954|PGBD3|267004|piggyBac transposable element derived 3##AK074682|PGBD3|267004|piggyBac transposable element derived 3##BC063690|PGBD3|267004|piggyBac transposable element derived 3##NM_170753|PGBD3|267004|piggyBac transposable element derived 3##AF305909|CHAT|1103|choline O-acetyltransferase##D82342|CHAT|1103|choline O-acetyltransferase##NM_020984|CHAT|1103|choline O-acetyltransferase##NM_003055|SLC18A3|6572|solute carrier family 18 (vesicular acetylcholine), member 3##U09210|SLC18A3|6572|solute carrier family 18 (vesicular acetylcholine), member 3##BC007765|SLC18A3|6572|solute carrier family 18 (vesicular acetylcholine), member 3##AK313094|SLC18A3|6572|solute carrier family 18 (vesicular acetylcholine), member 3##D82340|CHAT|1103|choline O-acetyltransferase##NM_020985|CHAT|1103|choline O-acetyltransferase##NM_020986|CHAT|1103|choline O-acetyltransferase##D82339|CHAT|1103|choline O-acetyltransferase##D82341|CHAT|1103|choline O-acetyltransferase	0.796306	CTCF.p2:2:0.796
chr21	45557975	45558099	reg1000661.p1	16.750	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-4476	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-4532	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-30738	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	102729	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	102820	-	AF194032 NM_013369 NM_175867	124061	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr2	85152976	85153138	reg1000652.p1	16.750	+	TSC_hg19_v1_chr2_+_85133055 M92381	-19995	+	NM_021103 AK130949 D28363 TSC_hg19_v1_chr2_+_85132779 AK311952 BC016731 BC107889 S54005 BC016025 M20259 AY453400	-20262	+	TSC_hg19_v1_chr2_-_85108241 NM_001080824 BC051789	-44754	-	TSC_hg19_v1_chr2_+_85198299 NM_020122	45227	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	45434	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	207602	+	M92381|TMSB10|9168|thymosin beta 10##NM_021103|TMSB10|9168|thymosin beta 10##AK130949|TMSB10|9168|thymosin beta 10##AK311952|TMSB10|9168|thymosin beta 10##BC016731|TMSB10|9168|thymosin beta 10##BC107889|TMSB10|9168|thymosin beta 10##S54005|TMSB10|9168|thymosin beta 10##BC016025|TMSB10|9168|thymosin beta 10##M20259|TMSB10|9168|thymosin beta 10##AY453400|TMSB10|9168|thymosin beta 10##NM_001080824|C2orf89|129293|chromosome 2 open reading frame 89##BC051789|C2orf89|129293|chromosome 2 open reading frame 89##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	1.9927	CTCF.p2:-44:0.993	CTCF.p2:61:1.000
chr15	80748271	80748401	reg1001066.p1	16.749	+	AK295763 TSC_hg19_v1_chr15_+_80733623	-14731	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	-51602	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-302960	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	239326	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	239673	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	323385	+	AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199	0.994636	CTCF.p2:-5:0.995
chr1	209866364	209866495	reg1000806.p1	16.744	+	NM_001206741 NM_181755	-6905	+	TSC_hg19_v1_chr1_+_209848994 BT007101 CR542179 CR542193 DQ894610 EU176279	-17418	+	TSC_hg19_v1_chr1_+_209848757 NM_015714 BC009694	-17705	+	NM_005525 TSC_hg19_v1_chr1_+_209878192 BC012593 AK313973 AB590223 DQ892912 EU176721	11782	+	TSC_hg19_v1_chr1_+_209929480 AK122792 NM_025228 BX648450 BC110302 AK300555 AK312755 AK225762 AL049667	63021	+	TSC_hg19_v1_chr1_+_209941909 AK126139	75487	+	NM_001206741|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##NM_181755|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##BT007101|G0S2|50486|G0/G1switch 2##CR542179|G0S2|50486|G0/G1switch 2##CR542193|G0S2|50486|G0/G1switch 2##DQ894610|G0S2|50486|G0/G1switch 2##EU176279|G0S2|50486|G0/G1switch 2##NM_015714|G0S2|50486|G0/G1switch 2##BC009694|G0S2|50486|G0/G1switch 2##NM_005525|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##BC012593|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##AK313973|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##DQ892912|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##EU176721|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##AK122792|TRAF3IP3|80342|TRAF3 interacting protein 3##NM_025228|TRAF3IP3|80342|TRAF3 interacting protein 3##BX648450|TRAF3IP3|80342|TRAF3 interacting protein 3##BC110302|TRAF3IP3|80342|TRAF3 interacting protein 3##AK300555|TRAF3IP3|80342|TRAF3 interacting protein 3##AK312755|TRAF3IP3|80342|TRAF3 interacting protein 3##AK225762|TRAF3IP3|80342|TRAF3 interacting protein 3##AL049667|TRAF3IP3|80342|TRAF3 interacting protein 3##AK126139|TRAF3IP3|80342|TRAF3 interacting protein 3	0.993739	CTCF.p2:11:0.994
chr15	85471541	85471650	reg1000290.p2	16.741	+	AK291997 AK296075 AK298369 AK296074 AK296119 AK309571 AK311387 AK309578 AF309632 NM_004213 NM_201651 BC029788	-43684	+	AY044449 NM_020778	-111685	+	TSC_hg19_v1_chr15_+_85291875 BC094688	-179733	+	TSC_hg19_v1_chr15_+_85523735 BC060762 AK074280 NM_001243137	52107	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	53642	+	BC075822 TSC_hg19_v1_chr15_+_85525333	53731	+	AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AY044449|ALPK3|57538|alpha-kinase 3##NM_020778|ALPK3|57538|alpha-kinase 3##BC094688|ZNF592|9640|zinc finger protein 592##BC060762|PDE8A|5151|phosphodiesterase 8A##AK074280|PDE8A|5151|phosphodiesterase 8A##NM_001243137|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A	0.049699	
chr16	72158907	72159039	reg1000823.p1	16.739	+	NM_001142318	-30759	-	NM_001142317	-31206	-	NM_014003 TSC_hg19_v1_chr16_+_72127745 AK301074 AK291634 AK293776 AK297269 AK311169 D86977 AK309391 BC004235 BC008340 AK297791	-31211	+	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	47070	-	AK122925 NM_001160213	47375	-	TSC_hg19_v1_chr16_+_72699031 AK021563	540091	+	NM_001142318|TXNL4B|54957|thioredoxin-like 4B##NM_001142317|TXNL4B|54957|thioredoxin-like 4B##NM_014003|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK301074|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK291634|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK293776|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK297269|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK311169|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##D86977|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK309391|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##BC004235|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##BC008340|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK297791|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	0.999898	CTCF.p2:-10:1.000
chr16	75145232	75145371	reg1001183.p1	16.738	+	TSC_hg19_v1_chr16_+_75033257 AK294434 BC007235 AF378524 AL136903	-112041	+	TSC_hg19_v1_chr16_+_75032911 NM_032268	-112407	+	TSC_hg19_v1_chr16_-_75019011 NM_030581	-126276	-	CU690528 TSC_hg19_v1_chr16_-_75150650 BC040279	5336	-	AY092767 BC047902 NM_153486 NM_194436 TSC_hg19_v1_chr16_-_75150679	5378	-	AK296560 TSC_hg19_v1_chr16_+_75182389 AK291372 NM_153688 AK094761 AK308134 BC064604	37133	+	AK294434|ZNRF1|84937|zinc and ring finger 1##BC007235|ZNRF1|84937|zinc and ring finger 1##AF378524|ZNRF1|84937|zinc and ring finger 1##AL136903|ZNRF1|84937|zinc and ring finger 1##NM_032268|ZNRF1|84937|zinc and ring finger 1##NM_030581|WDR59|79726|WD repeat domain 59##BC040279|LDHD|197257|lactate dehydrogenase D##AY092767|LDHD|197257|lactate dehydrogenase D##BC047902|LDHD|197257|lactate dehydrogenase D##NM_153486|LDHD|197257|lactate dehydrogenase D##NM_194436|LDHD|197257|lactate dehydrogenase D##AK296560|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK291372|ZFP1|162239|zinc finger protein 1 homolog (mouse)##NM_153688|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK094761|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK308134|ZFP1|162239|zinc finger protein 1 homolog (mouse)##BC064604|ZFP1|162239|zinc finger protein 1 homolog (mouse)	0.54792	CTCF.p2:13:0.548
chr13	103568483	103568621	reg1000751.p1	16.736	+	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-70066	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-70298	+	TSC_hg19_v1_chr13_+_103498240 NM_000123 BC031522 AF462447	-70343	+	NM_000452 U10417	150643	-	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	2549752	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	2550039	+	BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000123|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##BC031522|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AF462447|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator	0.987566	CTCF.p2:-18:0.988
chr14	61092199	61092332	reg1001263.p1	16.736	+	BC065831 NM_007374 BC087852 BC069413 AJ011785 EU446644	-116239	+	BC125070 BC125071 AK098187 NM_174978 AL832219	-139492	-	TSC_hg19_v1_chr14_+_60716314 AY236965	-375947	+	BT007083 CU679159 TSC_hg19_v1_chr14_-_61116196 BC008874 NM_005982 X91868	23825	-	AF032107 TSC_hg19_v1_chr14_-_61190584 BC098135 BC098282 BC099722 BC101934 EU446619 EU446844 NM_017420	98389	-	TSC_hg19_v1_chr14_-_61191035 AK309358	98792	-	BC065831|SIX6|4990|SIX homeobox 6##NM_007374|SIX6|4990|SIX homeobox 6##BC087852|SIX6|4990|SIX homeobox 6##BC069413|SIX6|4990|SIX homeobox 6##AJ011785|SIX6|4990|SIX homeobox 6##EU446644|SIX6|4990|SIX homeobox 6##BC125070|C14orf39|317761|chromosome 14 open reading frame 39##BC125071|C14orf39|317761|chromosome 14 open reading frame 39##AK098187|C14orf39|317761|chromosome 14 open reading frame 39##NM_174978|C14orf39|317761|chromosome 14 open reading frame 39##AL832219|C14orf39|317761|chromosome 14 open reading frame 39##AY236965|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BT007083|SIX1|6495|SIX homeobox 1##BC008874|SIX1|6495|SIX homeobox 1##NM_005982|SIX1|6495|SIX homeobox 1##X91868|SIX1|6495|SIX homeobox 1##AF032107|SIX4|51804|SIX homeobox 4##BC098135|SIX4|51804|SIX homeobox 4##BC098282|SIX4|51804|SIX homeobox 4##BC099722|SIX4|51804|SIX homeobox 4##BC101934|SIX4|51804|SIX homeobox 4##EU446619|SIX4|51804|SIX homeobox 4##EU446844|SIX4|51804|SIX homeobox 4##NM_017420|SIX4|51804|SIX homeobox 4##AK309358|SIX4|51804|SIX homeobox 4	0.9999	CTCF.p2:-7:1.000
chr9	136019911	136020051	reg1000865.p2	16.734	+	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	-23482	-	NM_001807 S79774 M85201 BC042510 AK299965	-82606	+	TSC_hg19_v1_chr9_+_135906386 AK000194 AK097295 AK293980 BC006409 AY007123 DQ892071 DQ895265 AJ420443 BC030157	-113593	+	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	4705	-	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	19316	-	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	64639	-	AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B	0.995459	CTCF.p2:8:0.995
chr1	55462158	55462293	reg1001449.p1	16.732	+	BC029775 NM_182532	-15761	+	NM_014762 TSC_hg19_v1_chr1_-_55352925	-109293	-	TSC_hg19_v1_chr1_-_55352904 D13643	-109327	-	AK129999 AY034632 NM_057176 BC103898 BC103899 BC103900	2396	+	NM_174936 TSC_hg19_v1_chr1_+_55505192	42945	+	TSC_hg19_v1_chr1_+_55505220 AK075365	42999	+	BC029775|TMEM61|199964|transmembrane protein 61##NM_182532|TMEM61|199964|transmembrane protein 61##NM_014762|DHCR24|1718|24-dehydrocholesterol reductase##D13643|DHCR24|1718|24-dehydrocholesterol reductase##AK129999|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##AY034632|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_057176|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103898|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103899|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103900|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_174936|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9	0.995709	CTCF.p2:28:0.996
chr14	70070429	70070556	reg1001193.p1	16.729	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	-119012	+	TSC_hg19_v1_chr14_+_69865419 BC047682	-205056	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	-205097	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	7818	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	7899	+	TSC_hg19_v1_chr14_+_70233809 BX640605	163314	+	AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC047682|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##D87434|KIAA0247|9766|KIAA0247##BX640605|SRSF5|6430|serine/arginine-rich splicing factor 5	0.031587	
chr7	47984933	47985067	reg1001388.p1	16.727	+	AK024728 NM_025031 BC113679 BC113681 AK092057 AX747337	-150062	+	AK126096 NM_001123065	-290159	+	TSC_hg19_v1_chr7_-_47622186 AB208995	-362814	-	AB061683 NM_138295	3053	-	BT019481 BT019482 CR536552 Y16893 AB463759 BC007013 TSC_hg19_v1_chr7_-_48019149 AK294117 AK290459 AF076844 AF110393	34152	-	TSC_hg19_v1_chr7_-_48019247 NM_004507	34229	-	AK024728|C7orf69|80099|chromosome 7 open reading frame 69##NM_025031|C7orf69|80099|chromosome 7 open reading frame 69##BC113679|C7orf69|80099|chromosome 7 open reading frame 69##BC113681|C7orf69|80099|chromosome 7 open reading frame 69##AK092057|PKD1L1|168507|polycystic kidney disease 1 like 1##AK126096|C7orf65|401335|chromosome 7 open reading frame 65##NM_001123065|C7orf65|401335|chromosome 7 open reading frame 65##AB208995|TNS3|64759|tensin 3##AB061683|PKD1L1|168507|polycystic kidney disease 1 like 1##NM_138295|PKD1L1|168507|polycystic kidney disease 1 like 1##BT019481|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BT019482|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##CR536552|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##Y16893|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BC007013|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK294117|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK290459|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF076844|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF110393|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##NM_004507|HUS1|3364|HUS1 checkpoint homolog (S. pombe)	0.998841	CTCF.p2:-4:0.999
chr1	111067237	111067331	reg1003711.p1	16.724	+	NM_005549	-5488	-	AY358683 AF333024 NM_032414 AY029225 BC025399 DQ891570 DQ894763	-73493	+	HQ257924 NM_006402 BC062619	-116758	-	AK290061 NM_004974 TSC_hg19_v1_chr1_-_111148981	81698	-	BC043564 NM_001204269	106811	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	150068	-	NM_005549|KCNA10|3744|potassium voltage-gated channel, shaker-related subfamily, member 10##AY358683|PROK1|84432|prokineticin 1##AF333024|PROK1|84432|prokineticin 1##NM_032414|PROK1|84432|prokineticin 1##AY029225|PROK1|84432|prokineticin 1##BC025399|PROK1|84432|prokineticin 1##DQ891570|PROK1|84432|prokineticin 1##DQ894763|PROK1|84432|prokineticin 1##HQ257924|HBXIP|10542|hepatitis B virus x interacting protein##NM_006402|HBXIP|10542|hepatitis B virus x interacting protein##BC062619|HBXIP|10542|hepatitis B virus x interacting protein##AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##BC043564|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_001204269|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3	0.987098	CTCF.p2:-13:0.987
chr12	7372382	7372507	reg1001271.p1	16.724	+	BC010621 X84899 NM_000319 U19721 AB527550 DQ891142 DQ894321 CU679763	-29480	+	TSC_hg19_v1_chr12_+_7342306 Z48054 AK299105 NM_001131023 NM_001131024 NM_001131025 AK302742 AK225126 AK312317 AK316250 AK303515	-30090	+	AK292256 NM_001131026	-30686	+	NM_001080454	84483	+	GQ397482 AY358856 AK303372 AF264014 NM_174941 BC104962 BC104964	224293	-	DQ058615 TSC_hg19_v1_chr12_-_7656374 BC051281 AK226017 Z22968 Z22969 Z22970 Z22971 NM_004244 NM_203416	283906	-	BC010621|PEX5|5830|peroxisomal biogenesis factor 5##X84899|PEX5|5830|peroxisomal biogenesis factor 5##NM_000319|PEX5|5830|peroxisomal biogenesis factor 5##U19721|PEX5|5830|peroxisomal biogenesis factor 5##DQ891142|PEX5|5830|peroxisomal biogenesis factor 5##DQ894321|PEX5|5830|peroxisomal biogenesis factor 5##Z48054|PEX5|5830|peroxisomal biogenesis factor 5##AK299105|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131023|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131024|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131025|PEX5|5830|peroxisomal biogenesis factor 5##AK302742|PEX5|5830|peroxisomal biogenesis factor 5##AK225126|PEX5|5830|peroxisomal biogenesis factor 5##AK312317|PEX5|5830|peroxisomal biogenesis factor 5##AK316250|PEX5|5830|peroxisomal biogenesis factor 5##AK303515|PEX5|5830|peroxisomal biogenesis factor 5##AK292256|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131026|PEX5|5830|peroxisomal biogenesis factor 5##NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4##GQ397482|CD163L1|283316|CD163 molecule-like 1##AK303372|CD163L1|283316|CD163 molecule-like 1##AF264014|CD163L1|283316|CD163 molecule-like 1##NM_174941|CD163L1|283316|CD163 molecule-like 1##BC104962|CD163L1|283316|CD163 molecule-like 1##BC104964|CD163L1|283316|CD163 molecule-like 1##DQ058615|CD163|9332|CD163 molecule##BC051281|CD163|9332|CD163 molecule##AK226017|CD163|9332|CD163 molecule##Z22968|CD163|9332|CD163 molecule##Z22969|CD163|9332|CD163 molecule##Z22970|CD163|9332|CD163 molecule##Z22971|CD163|9332|CD163 molecule##NM_004244|CD163|9332|CD163 molecule##NM_203416|CD163|9332|CD163 molecule	0.989675	CTCF.p2:-10:0.990
chr3	149111281	149111395	reg1000908.p1	16.724	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-15796	-	TSC_hg19_v1_chr3_-_149095468 AK130073	-15866	-	TSC_hg19_v1_chr3_-_149095436 BC008442	-15906	-	NM_004617 TSC_hg19_v1_chr3_+_149192430	81064	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	81151	+	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	264397	-	BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AK130073|TM4SF1|4071|transmembrane 4 L six family member 1##BC008442|TM4SF1|4071|transmembrane 4 L six family member 1##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1	0.429349	CTCF.p2:-12:0.429
chr15	31421613	31421738	reg1001522.p1	16.721	+	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-27758	-	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	-137908	-	CR936734 CR936727 TSC_hg19_v1_chr15_+_31196114 AB023235	-225558	+	GQ502181 HM135791 NM_001252020	31753	-	NM_001243538	101374	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	197663	+	AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10##CR936734|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936727|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AB023235|FAN1|22909|FANCD2/FANCI-associated nuclease 1##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001243538|LOC283710|283710|uncharacterized LOC283710##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13	0.896864	CTCF.p2:-2:0.897
chr12	12808979	12809104	reg1000797.p2	16.719	+	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	-44158	+	TSC_hg19_v1_chr12_+_12764831 BC106052 AF039081 NM_001310 AK307202	-44246	+	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	-93641	-	AK096388 NM_006143	40079	-	TSC_hg19_v1_chr12_+_12870308 AK312461 NM_004064 BC001971 AK298335	61085	+	TSC_hg19_v1_chr12_+_12878853 NM_001130415 AK127712 BC042478 AM393383	69815	+	BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2##BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2##AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2##AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2##AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16##AK096388|GPR19|2842|G protein-coupled receptor 19##NM_006143|GPR19|2842|G protein-coupled receptor 19##AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_001130415|APOLD1|81575|apolipoprotein L domain containing 1##BC042478|APOLD1|81575|apolipoprotein L domain containing 1##AM393383|APOLD1|81575|apolipoprotein L domain containing 1	0.834899	CTCF.p2:8:0.835
chr2	235409181	235409307	reg1001190.p1	16.719	+	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	-3525	-	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-449857	+	AY090109 NM_024080 BC126342 BC143819	-583199	+	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	451414	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	993559	+	TSC_hg19_v1_chr2_+_236402950 BC140856	993733	+	NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.905835	CTCF.p2:19:0.906
chr11	73675493	73675599	reg1000606.p1	16.718	+	AY138810 NM_153614	-14183	+	BC028677 TSC_hg19_v1_chr11_+_73588043 AK021910 AK222501 NM_025155 AK316394 AK225520 BC045774 BC021541 BC028628 BC006142 CU675271 AF087895	-87501	+	TSC_hg19_v1_chr11_-_73587892 AL359618 AK000434 NM_016565 BC106036	-87650	-	U94592 BC011737 TSC_hg19_v1_chr11_-_73693862	18298	-	TSC_hg19_v1_chr11_-_73693886 AK222540 AK222557 NM_003355	18339	-	TSC_hg19_v1_chr11_-_73694300 AK025742	18797	-	AY138810|DNAJB13|374407|DnaJ (Hsp40) homolog, subfamily B, member 13##NM_153614|DNAJB13|374407|DnaJ (Hsp40) homolog, subfamily B, member 13##BC028677|PAAF1|80227|proteasomal ATPase-associated factor 1##AK021910|PAAF1|80227|proteasomal ATPase-associated factor 1##AK222501|PAAF1|80227|proteasomal ATPase-associated factor 1##NM_025155|PAAF1|80227|proteasomal ATPase-associated factor 1##AK316394|PAAF1|80227|proteasomal ATPase-associated factor 1##AK225520|PAAF1|80227|proteasomal ATPase-associated factor 1##BC045774|PAAF1|80227|proteasomal ATPase-associated factor 1##BC021541|PAAF1|80227|proteasomal ATPase-associated factor 1##BC028628|PAAF1|80227|proteasomal ATPase-associated factor 1##BC006142|PAAF1|80227|proteasomal ATPase-associated factor 1##AF087895|PAAF1|80227|proteasomal ATPase-associated factor 1##AL359618|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##AK000434|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##NM_016565|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##BC106036|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##BC011737|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK025742|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)	0.767066	CTCF.p2:4:0.767
chr1	203309326	203309466	reg1001359.p1	16.717	+	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	-34707	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-110581	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-153470	-	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	7988	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	10813	-	AK172740 TSC_hg19_v1_chr1_-_203320256	10865	-	NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.999565	CTCF.p2:-18:1.000
chr4	87817010	87817137	reg1001014.p1	16.710	+	BC016746 BC063410 NM_144645	-3513	-	AJ583502 BC107051 BC107052 EF437223 NM_197965	-46732	-	TSC_hg19_v1_chr4_+_87515468 AK056151 NM_006264 NM_080683 NM_080684 NM_080685 BC139915 U12132 U12129 U12130	-301600	+	TSC_hg19_v1_chr4_+_87856199 AK296149 NM_001166693 AK300364 BC017432 AK302199	39142	+	TSC_hg19_v1_chr4_+_87857481 L13743	40410	+	TSC_hg19_v1_chr4_+_87928422 L13773 BC114930 NM_005935 AK296243 L25050 AB385236	111248	+	BC016746|C4orf36|132989|chromosome 4 open reading frame 36##BC063410|C4orf36|132989|chromosome 4 open reading frame 36##NM_144645|C4orf36|132989|chromosome 4 open reading frame 36##AJ583502|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC107051|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC107052|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##EF437223|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##NM_197965|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##AK056151|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_006264|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080683|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080684|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080685|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##BC139915|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##U12132|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##U12129|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##AK296149|AFF1|4299|AF4/FMR2 family, member 1##NM_001166693|AFF1|4299|AF4/FMR2 family, member 1##AK300364|AFF1|4299|AF4/FMR2 family, member 1##BC017432|AFF1|4299|AF4/FMR2 family, member 1##L13773|AFF1|4299|AF4/FMR2 family, member 1##BC114930|AFF1|4299|AF4/FMR2 family, member 1##NM_005935|AFF1|4299|AF4/FMR2 family, member 1##AK296243|AFF1|4299|AF4/FMR2 family, member 1##L25050|AFF1|4299|AF4/FMR2 family, member 1	0.995095	CTCF.p2:13:0.995
chr20	4089403	4089513	reg1000786.p1	16.709	+	AL096778 NM_007219 BC039584 TSC_hg19_v1_chr20_-_3996221 BC000213 BC003141 NM_001134337 NM_001134338 BC032738	-93293	-	NM_153640 BC107724 BC065019	-218969	+	TSC_hg19_v1_chr20_+_3870042 AK310190 AK097796 BC142976 BC009421	-219402	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	39977	+	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	40065	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	140132	-	AL096778|RNF24|11237|ring finger protein 24##NM_007219|RNF24|11237|ring finger protein 24##BC039584|RNF24|11237|ring finger protein 24##BC000213|RNF24|11237|ring finger protein 24##NM_001134337|RNF24|11237|ring finger protein 24##NM_001134338|RNF24|11237|ring finger protein 24##NM_153640|PANK2|80025|pantothenate kinase 2##BC107724|PANK2|80025|pantothenate kinase 2##BC065019|PANK2|80025|pantothenate kinase 2##AK310190|PANK2|80025|pantothenate kinase 2##AK097796|PANK2|80025|pantothenate kinase 2##BC142976|PANK2|80025|pantothenate kinase 2##BC009421|PANK2|80025|pantothenate kinase 2##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor	0.0	
chr11	86167268	86167384	reg1001096.p1	16.707	+	AK131331 NM_001156474 NM_021827	-81549	+	NM_016401 TSC_hg19_v1_chr11_+_86013281 AF161487 AF161527 AK001447 AK223198 BC015991 BC021621 AK298763 BC018080 BC001677 BC006476 DQ892731 DQ895977 CU674828 CU676162	-153957	+	TSC_hg19_v1_chr11_+_85956277 BC068995 AK294133 CU686693 AB463023 EU446743 AF078933 AK301265 BC047672	-211040	+	TSC_hg19_v1_chr11_-_86383218 BC022472 NM_001014811 AK092181	215879	-	X79440 TSC_hg19_v1_chr11_-_86383470 NM_006680 AK313695	216116	-	TSC_hg19_v1_chr11_-_86383659 AK300974 NM_001161586	216339	-	AK131331|CCDC81|60494|coiled-coil domain containing 81##NM_001156474|CCDC81|60494|coiled-coil domain containing 81##NM_021827|CCDC81|60494|coiled-coil domain containing 81##NM_016401|C11orf73|51501|chromosome 11 open reading frame 73##AF161487|C11orf73|51501|chromosome 11 open reading frame 73##AF161527|C11orf73|51501|chromosome 11 open reading frame 73##AK001447|C11orf73|51501|chromosome 11 open reading frame 73##AK223198|C11orf73|51501|chromosome 11 open reading frame 73##BC015991|C11orf73|51501|chromosome 11 open reading frame 73##BC021621|C11orf73|51501|chromosome 11 open reading frame 73##AK298763|C11orf73|51501|chromosome 11 open reading frame 73##BC018080|C11orf73|51501|chromosome 11 open reading frame 73##BC001677|C11orf73|51501|chromosome 11 open reading frame 73##BC006476|C11orf73|51501|chromosome 11 open reading frame 73##DQ892731|C11orf73|51501|chromosome 11 open reading frame 73##DQ895977|C11orf73|51501|chromosome 11 open reading frame 73##BC068995|EED|8726|embryonic ectoderm development##AK294133|EED|8726|embryonic ectoderm development##EU446743|EED|8726|embryonic ectoderm development##AF078933|EED|8726|embryonic ectoderm development##AK301265|EED|8726|embryonic ectoderm development##BC047672|EED|8726|embryonic ectoderm development##BC022472|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001014811|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK092181|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##X79440|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_006680|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK313695|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK300974|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001161586|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial	0.999922	CTCF.p2:-1:1.000
chr1	203242337	203242451	reg1000558.p1	16.705	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-43579	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-86468	-	BC008568 TSC_hg19_v1_chr1_-_203155877 AK312911	-86506	-	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	32295	+	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	74990	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	77815	-	U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.995025	CTCF.p2:-18:0.995
chr15	90701219	90701323	reg1000939.p1	16.704	+	TSC_hg19_v1_chr15_-_90645713 AK312627	-55544	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	-55566	-	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	-55609	-	TSC_hg19_v1_chr15_+_90728151 NM_020210 AK289991 AY358392	26925	+	TSC_hg19_v1_chr15_+_90744561 AY445887 NM_198925 AB051532 BC126438 BC144141 BC110853 AB385501 HQ258520 AK026108	43419	+	TSC_hg19_v1_chr15_-_90777138 AB451276 AB451406 AB463454 CR456955 DQ891196 DQ894379	75857	-	AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_020210|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK289991|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY358392|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY445887|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_198925|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB051532|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC126438|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC144141|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC110853|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##HQ258520|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK026108|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB451276|CIB1|10519|calcium and integrin binding 1 (calmyrin)##AB451406|CIB1|10519|calcium and integrin binding 1 (calmyrin)##CR456955|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ891196|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ894379|CIB1|10519|calcium and integrin binding 1 (calmyrin)	0.836217	CTCF.p2:-28:0.836
chr15	89600874	89600998	reg1000760.p1	16.701	+	BC003610 AK095908 AK222735 AK223182 AK304627 AK310357 AK312640 U58516 AY141974 TSC_hg19_v1_chr15_-_89456611 NM_001114614 NM_005928	-144297	-	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	-144376	-	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	-162138	-	NM_007011 NM_152924	30444	+	TSC_hg19_v1_chr15_+_89631652 BC090052 AF546700 BC019248	30712	+	TSC_hg19_v1_chr15_+_89631708 AL110291 AK222841 AK290340 AK223083 AK296827	30767	+	BC003610|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK095908|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK222735|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK223182|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK304627|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK310357|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK312640|MFGE8|4240|milk fat globule-EGF factor 8 protein##U58516|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY141974|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_001114614|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_005928|MFGE8|4240|milk fat globule-EGF factor 8 protein##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_007011|ABHD2|11057|abhydrolase domain containing 2##NM_152924|ABHD2|11057|abhydrolase domain containing 2##BC090052|ABHD2|11057|abhydrolase domain containing 2##AF546700|ABHD2|11057|abhydrolase domain containing 2##BC019248|ABHD2|11057|abhydrolase domain containing 2##AL110291|ABHD2|11057|abhydrolase domain containing 2##AK222841|ABHD2|11057|abhydrolase domain containing 2##AK290340|ABHD2|11057|abhydrolase domain containing 2##AK223083|ABHD2|11057|abhydrolase domain containing 2##AK296827|ABHD2|11057|abhydrolase domain containing 2	0.904461	CTCF.p2:-17:0.832
chr14	102237413	102237528	reg1001310.p1	16.700	+	NM_001161725 NM_001161726 TSC_hg19_v1_chr14_+_102228166 AL834350 BC051442 AK131391 AK302470	-9284	+	BX161470 NM_001362 S79854 TSC_hg19_v1_chr14_+_102027831 AK292310 BC017717	-209707	+	BC150617 NM_001134888	-886287	-	TSC_hg19_v1_chr14_+_102276171 NM_002719 NM_178586 NM_178587 AK295449 AK315072 Z69030 U37352 BC016183	38713	+	AB451341 CU677587 D26445 AB463199 L42375 TSC_hg19_v1_chr14_+_102276338	38839	+	TSC_hg19_v1_chr14_+_102430876 AB290157 NM_001376 AK299878	193358	+	NM_001161725|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_001161726|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AL834350|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC051442|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK131391|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK302470|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BX161470|DIO3|1735|deiodinase, iodothyronine, type III##NM_001362|DIO3|1735|deiodinase, iodothyronine, type III##S79854|DIO3|1735|deiodinase, iodothyronine, type III##BC017717|DIO3|1735|deiodinase, iodothyronine, type III##BC150617|RTL1|388015|retrotransposon-like 1##NM_001134888|RTL1|388015|retrotransposon-like 1##NM_002719|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178586|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178587|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK315072|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##Z69030|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##U37352|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC016183|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AB451341|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##D26445|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##L42375|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AB290157|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##NM_001376|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AK299878|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1	0.033755	
chr22	25858640	25858754	reg1000647.p1	16.700	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	-14621	+	BC139736 NM_001135772	-81154	-	AL137651 NM_182492	-100174	-	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	102102	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	102249	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	279423	+	BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB	0.989727	CTCF.p2:-13:0.990
chr14	77519679	77519830	reg1001445.p1	16.699	+	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-24694	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	-25070	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-226959	+	AK124327 TSC_hg19_v1_chr14_-_77542533	22779	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	44891	+	BC117676 TSC_hg19_v1_chr14_-_77608072	88261	-	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22	1.162488	CTCF.p2:16:0.996
chr13	111064711	111064837	reg1001236.p1	16.698	+	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	-105153	+	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	-105265	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	-262039	-	BX648393 TSC_hg19_v1_chr13_+_111134980	70184	+	AK025912 TSC_hg19_v1_chr13_+_111137262	72490	+	TSC_hg19_v1_chr13_+_111138079 M24766	73314	+	AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BX648393|COL4A2|1284|collagen, type IV, alpha 2##AK025912|COL4A2|1284|collagen, type IV, alpha 2##M24766|COL4A2|1284|collagen, type IV, alpha 2	0.679042	CTCF.p2:-1:0.679
chr20	56784988	56785133	reg1001097.p1	16.696	+	NM_178456 BC035405	-59073	+	NM_199171	-498520	-	TSC_hg19_v1_chr20_-_56285634 BC080635 AF224278 AY128643 NM_199169 NM_199170 AX775887 AK296199	-499438	-	AK299330 AK057583 BC100979 BC100980 TSC_hg19_v1_chr20_-_56884511	99439	-	TSC_hg19_v1_chr20_+_56884770 NM_020673 BC063457 AF091034 AJ276210	99722	+	TSC_hg19_v1_chr20_+_56884847 BC015710	99784	+	NM_178456|C20orf85|128602|chromosome 20 open reading frame 85##BC035405|C20orf85|128602|chromosome 20 open reading frame 85##NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##BC080635|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AF224278|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AY128643|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199169|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199170|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK296199|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK299330|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##AK057583|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100979|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100980|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##NM_020673|RAB22A|57403|RAB22A, member RAS oncogene family##BC063457|RAB22A|57403|RAB22A, member RAS oncogene family##AF091034|RAB22A|57403|RAB22A, member RAS oncogene family##AJ276210|RAB22A|57403|RAB22A, member RAS oncogene family##BC015710|RAB22A|57403|RAB22A, member RAS oncogene family	1.817581	CTCF.p2:-17:0.839	CTCF.p2:34:0.978
chr13	114992334	114992444	reg1000671.p2	16.692	+	TSC_hg19_v1_chr13_-_114898084 BC047242 BC038456 NM_007368	-94286	-	TSC_hg19_v1_chr13_-_114898058 AK128094	-94323	-	TSC_hg19_v1_chr13_-_114898028 AK295861 AK313795	-94364	-	TSC_hg19_v1_chr13_+_115000360 NM_001078645 NM_003903	7970	+	TSC_hg19_v1_chr13_+_115000402 AK296424 BC017244 BC010875 AK315302 U18291 AB590520 AF164598 CU677877	8073	+	TSC_hg19_v1_chr13_+_115047085 AY013250 NM_023011 NM_080687 BC023569 BC047735 AK294545 AK302003 AF318575	54725	+	BC047242|RASA3|22821|RAS p21 protein activator 3##BC038456|RASA3|22821|RAS p21 protein activator 3##NM_007368|RASA3|22821|RAS p21 protein activator 3##AK128094|RASA3|22821|RAS p21 protein activator 3##AK295861|RASA3|22821|RAS p21 protein activator 3##AK313795|RASA3|22821|RAS p21 protein activator 3##NM_001078645|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##NM_003903|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AK296424|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC017244|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC010875|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AK315302|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##U18291|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AF164598|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AY013250|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_023011|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_080687|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC023569|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC047735|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK294545|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK302003|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AF318575|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)	0.935786	CTCF.p2:10:0.936
chr16	20311909	20312023	reg1000778.p1	16.691	+	AB196529 AY635179 BC137237 BC137238 BC144547 NM_001002911 AK291384	-226879	-	AK295204 AF202640 TSC_hg19_v1_chr16_-_19896168 BC034467 AF181862 NM_016235 AK294680 AK075119 AK315989 AK296754	-415802	-	TSC_hg19_v1_chr16_-_19729532 BC117562 NM_001012991	-582479	-	U36221 AK312277 BX647831 BX648201 BX649067 BX648023 NM_001007240 NM_001007241 NM_001007242 NM_001502 CR749600	26887	-	AK127643 AK055722 AK091961 AK096043 AX747279 M15881 BC035975 AK127648 NM_001008389 NM_003361	52066	-	BC042607 BC044936 NM_174924 AK097476	104079	-	AB196529|GPR139|124274|G protein-coupled receptor 139##AY635179|GPR139|124274|G protein-coupled receptor 139##BC137237|GPR139|124274|G protein-coupled receptor 139##BC137238|GPR139|124274|G protein-coupled receptor 139##NM_001002911|GPR139|124274|G protein-coupled receptor 139##AK291384|GPR139|124274|G protein-coupled receptor 139##AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC117562|C16orf88|400506|chromosome 16 open reading frame 88##NM_001012991|C16orf88|400506|chromosome 16 open reading frame 88##U36221|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK312277|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX647831|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648201|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX649067|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648023|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007240|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007241|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007242|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001502|GP2|2813|glycoprotein 2 (zymogen granule membrane)##CR749600|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK127643|UMOD|7369|uromodulin##AK055722|UMOD|7369|uromodulin##AK091961|UMOD|7369|uromodulin##AK096043|UMOD|7369|uromodulin##M15881|UMOD|7369|uromodulin##BC035975|UMOD|7369|uromodulin##AK127648|UMOD|7369|uromodulin##NM_001008389|UMOD|7369|uromodulin##NM_003361|UMOD|7369|uromodulin##BC042607|PDILT|204474|protein disulfide isomerase-like, testis expressed##BC044936|PDILT|204474|protein disulfide isomerase-like, testis expressed##NM_174924|PDILT|204474|protein disulfide isomerase-like, testis expressed##AK097476|PDILT|204474|protein disulfide isomerase-like, testis expressed	0.96218	CTCF.p2:8:0.962
chr17	78400811	78400928	reg1000720.p1	16.691	+	TSC_hg19_v1_chr17_+_78389268 AK123689 BX647411 BC037889 BC045824 AK056045 AK096802	-11619	+	TSC_hg19_v1_chr17_+_78388983 BC064545	-11887	+	TSC_hg19_v1_chr17_+_78388966 AK092539 AK096344 AX747589 NM_001164637 NM_001164638 NM_173627 BC059781	-11909	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	49458	-	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	117780	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	117949	+	AK123689|ENDOV|284131|endonuclease V##BX647411|ENDOV|284131|endonuclease V##BC037889|ENDOV|284131|endonuclease V##BC045824|ENDOV|284131|endonuclease V##AK096802|ENDOV|284131|endonuclease V##BC064545|ENDOV|284131|endonuclease V##AK092539|ENDOV|284131|endonuclease V##AK096344|ENDOV|284131|endonuclease V##NM_001164637|ENDOV|284131|endonuclease V##NM_001164638|ENDOV|284131|endonuclease V##NM_173627|ENDOV|284131|endonuclease V##BC059781|ENDOV|284131|endonuclease V##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1	1.120769	CTCF.p2:-12:1.000
chr12	78118290	78118410	reg1000696.p1	16.689	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-659061	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-845567	-	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	-960324	+	NM_014903 AJ488201	106782	+	AK094616 NM_001135805	1139422	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	1140125	+	BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17##NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I	0.940575	CTCF.p2:-8:0.941
chr12	4967003	4967130	reg1001446.p1	16.688	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	-48651	+	AJ271385 NM_017417 BC140888 BC140889	-137298	+	TSC_hg19_v1_chr12_+_4758272 NM_005002 BC015837 AF050641 AK308588 BC009311 AK291067 BC111546 L04490	-208788	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	51994	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	186053	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	574210	+	NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_005002|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC015837|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AF050641|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK308588|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC009311|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK291067|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC111546|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##L04490|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3	0.997523	CTCF.p2:-5:0.998
chr11	6778740	6778855	reg1001227.p1	16.686	+	TSC_hg19_v1_chr11_-_6704541 CR457177 DQ891581 DQ894774 DQ895036 AB463889 BC012306 AK026857 AF164797 AF141338 NM_022061	-74223	-	TSC_hg19_v1_chr11_-_6676982 AB053446 NM_003737	-101834	-	TSC_hg19_v1_chr11_-_6643809 BC038382	-134936	-	NM_001004490 BC140734	11439	-	BC151143 NM_001004489	27450	+	BC101489 BC101491 NM_003696	38278	-	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17##DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17##DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17##DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17##BC012306|MRPL17|63875|mitochondrial ribosomal protein L17##AK026857|MRPL17|63875|mitochondrial ribosomal protein L17##AF164797|MRPL17|63875|mitochondrial ribosomal protein L17##AF141338|MRPL17|63875|mitochondrial ribosomal protein L17##NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17##AB053446|DCHS1|8642|dachsous 1 (Drosophila)##NM_003737|DCHS1|8642|dachsous 1 (Drosophila)##BC038382|DCHS1|8642|dachsous 1 (Drosophila)##NM_001004490|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC140734|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC151143|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##NM_001004489|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	0.976263	CTCF.p2:8:0.976
chr8	58255992	58256119	reg1001354.p1	16.683	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-349629	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-349653	-	TSC_hg19_v1_chr8_-_57906381 BC017797	-349677	-	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	651102	+	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	1067830	+	X56088 M93133 BC101777 BC112184 NM_000780	1156652	-	AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	0.999835	CTCF.p2:8:1.000
chr5	157602068	157602192	reg1001416.p1	16.682	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-316040	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-417750	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-431390	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	924327	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	924612	-	AK304228 NM_001199382	1032518	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.032988	
chr14	106144013	106144125	reg1000909.p1	16.681	+	TSC_hg19_v1_chr14_-_106111114 AJ294731	-32953	-	BC040042 TSC_hg19_v1_chr14_-_106110945	-33146	-	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	-51733	-	TSC_hg19_v1_chr14_-_106174914 BC113815 AJ294729	30884	-	TSC_hg19_v1_chr14_-_106208542 AF487336	64480	-	AF150959 TSC_hg19_v1_chr14_-_106208714 S76144	64641	-	AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AJ294729|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.27323	
chr22	30683890	30684010	reg1000562.p3	16.678	+	CR541703 AB463155 CU013134 CU013422 DQ892537 DQ895748 CR456534 BC011589 NM_020530 TSC_hg19_v1_chr22_-_30662841	-21135	-	AB527710 X13967 BC093733 BC093735 BC143305 BC069540 TSC_hg19_v1_chr22_-_30642749 AK315310 NM_002309	-41211	-	BC030013 NM_152510	-207498	+	CU013000 CU013288 CU692418 AB528172 BC021927 AK309436 AK055587 TSC_hg19_v1_chr22_-_30685566 CR456449 AK310246 NM_001037666	1600	-	TSC_hg19_v1_chr22_-_30722928 AB449894 AB590468 BC143051 BC143052 BC150187 CT841514 BC150214 AK127939 AF331038 BC022201 BC136815 BC171775 AK074656 BC142940 NM_001204240 NM_031937	38977	-	TSC_hg19_v1_chr22_+_30752612 BC018040 NM_001017437	68669	+	CR541703|OSM|5008|oncostatin M##CU013134|OSM|5008|oncostatin M##CU013422|OSM|5008|oncostatin M##DQ892537|OSM|5008|oncostatin M##DQ895748|OSM|5008|oncostatin M##CR456534|OSM|5008|oncostatin M##BC011589|OSM|5008|oncostatin M##NM_020530|OSM|5008|oncostatin M##X13967|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093733|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093735|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC143305|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC069540|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AK315310|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##NM_002309|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC030013|HORMAD2|150280|HORMA domain containing 2##NM_152510|HORMAD2|150280|HORMA domain containing 2##CU013000|GATSL3|652968|GATS protein-like 3##CU013288|GATSL3|652968|GATS protein-like 3##BC021927|GATSL3|652968|GATS protein-like 3##AK309436|GATSL3|652968|GATS protein-like 3##AK055587|GATSL3|652968|GATS protein-like 3##CR456449|GATSL3|652968|GATS protein-like 3##AK310246|GATSL3|652968|GATS protein-like 3##NM_001037666|GATSL3|652968|GATS protein-like 3##AB449894|TBC1D10A|83874|TBC1 domain family, member 10A##BC143051|TBC1D10A|83874|TBC1 domain family, member 10A##BC143052|TBC1D10A|83874|TBC1 domain family, member 10A##BC150187|TBC1D10A|83874|TBC1 domain family, member 10A##CT841514|TBC1D10A|83874|TBC1 domain family, member 10A##BC150214|TBC1D10A|83874|TBC1 domain family, member 10A##AK127939|TBC1D10A|83874|TBC1 domain family, member 10A##AF331038|TBC1D10A|83874|TBC1 domain family, member 10A##BC022201|TBC1D10A|83874|TBC1 domain family, member 10A##BC136815|TBC1D10A|83874|TBC1 domain family, member 10A##BC171775|TBC1D10A|83874|TBC1 domain family, member 10A##AK074656|TBC1D10A|83874|TBC1 domain family, member 10A##BC142940|TBC1D10A|83874|TBC1 domain family, member 10A##NM_001204240|TBC1D10A|83874|TBC1 domain family, member 10A##NM_031937|TBC1D10A|83874|TBC1 domain family, member 10A##BC018040|CCDC157|550631|coiled-coil domain containing 157##NM_001017437|CCDC157|550631|coiled-coil domain containing 157	0.97724	CTCF.p2:-15:0.977
chr20	37897738	37897847	reg1000801.p1	16.676	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-306803	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-342724	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-342803	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1420085	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1759702	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1759872	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.996408	CTCF.p2:-18:0.996
chr6	13336843	13336981	reg1001424.p1	16.676	+	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	-8212	-	AK091836 AX747210 NM_001242698	-41095	-	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-619869	+	AK027010 NM_001242630	71456	-	AK055131 AF264036 NM_001242628	149486	-	TSC_hg19_v1_chr6_-_13487051 BC148295 BC119005 BC124557	150185	-	AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AK055131|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF264036|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242628|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC148295|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC119005|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC124557|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.829239	CTCF.p2:-10:0.776
chr19	50050345	50050491	reg1001721.p1	16.675	+	TSC_hg19_v1_chr19_+_50031259 AY358423 BC013436	-19157	+	AY195859 NM_020650	-19544	+	TSC_hg19_v1_chr19_+_50016643 AK075510 BC020421 AK299124 AB463631 DQ893544 DQ893808 BT006828	-33786	+	BC047314 TSC_hg19_v1_chr19_-_50083811 BC009299 BC010077 NM_015953 AK092444 AX747549 AK291535 AK300720	33383	-	AF132959 TSC_hg19_v1_chr19_-_50083814	33396	-	NM_000951 BC026032	34189	+	AY358423|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##BC013436|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##AY195859|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##NM_020650|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##AK075510|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BC020421|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##AK299124|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##DQ893544|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##DQ893808|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BT006828|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BC047314|NOSIP|51070|nitric oxide synthase interacting protein##BC009299|NOSIP|51070|nitric oxide synthase interacting protein##BC010077|NOSIP|51070|nitric oxide synthase interacting protein##NM_015953|NOSIP|51070|nitric oxide synthase interacting protein##AK092444|NOSIP|51070|nitric oxide synthase interacting protein##AK291535|NOSIP|51070|nitric oxide synthase interacting protein##AK300720|NOSIP|51070|nitric oxide synthase interacting protein##AF132959|NOSIP|51070|nitric oxide synthase interacting protein##NM_000951|PRRG2|5639|proline rich Gla (G-carboxyglutamic acid) 2##BC026032|PRRG2|5639|proline rich Gla (G-carboxyglutamic acid) 2	0.999615	CTCF.p2:4:1.000
chr5	137412928	137413051	reg1001241.p1	16.675	+	TSC_hg19_v1_chr5_-_137368794 NM_001101800 NM_001101801 NM_016603	-44199	-	TSC_hg19_v1_chr5_-_137368776 AK314224	-44213	-	TSC_hg19_v1_chr5_-_137368770 BC041335 BC048965	-44218	-	BC144497 AY009402 BC144001 AB057725 NM_058244 AB590697	6690	+	U90450 AK312181 AF067724 BC026182 NM_003551	62114	-	BC008039 BC008076 AB384833 AB209079 TSC_hg19_v1_chr5_-_137514319 AK310380 AK289951 AK293621 AK297756 AK299694 AK312333 AK225928 AL136823 NM_001164326 NM_006696 NM_139199	101344	-	NM_001101800|FAM13B|51306|family with sequence similarity 13, member B##NM_001101801|FAM13B|51306|family with sequence similarity 13, member B##NM_016603|FAM13B|51306|family with sequence similarity 13, member B##AK314224|FAM13B|51306|family with sequence similarity 13, member B##BC041335|FAM13B|51306|family with sequence similarity 13, member B##BC048965|FAM13B|51306|family with sequence similarity 13, member B##BC144497|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AY009402|WNT8A|7478|wingless-type MMTV integration site family, member 8A##BC144001|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AB057725|WNT8A|7478|wingless-type MMTV integration site family, member 8A##NM_058244|WNT8A|7478|wingless-type MMTV integration site family, member 8A##U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC008039|BRD8|10902|bromodomain containing 8##BC008076|BRD8|10902|bromodomain containing 8##AB209079|BRD8|10902|bromodomain containing 8##AK310380|BRD8|10902|bromodomain containing 8##AK289951|BRD8|10902|bromodomain containing 8##AK293621|BRD8|10902|bromodomain containing 8##AK297756|BRD8|10902|bromodomain containing 8##AK312333|BRD8|10902|bromodomain containing 8##AK225928|BRD8|10902|bromodomain containing 8##AL136823|BRD8|10902|bromodomain containing 8##NM_001164326|BRD8|10902|bromodomain containing 8##NM_006696|BRD8|10902|bromodomain containing 8##NM_139199|BRD8|10902|bromodomain containing 8	0.99727	CTCF.p2:-14:0.997
chr9	139525961	139526078	reg1000791.p4	16.675	+	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	-85769	-	TSC_hg19_v1_chr9_-_139378220 AB593115	-147777	-	BC036221 NM_152571 AK055336	-148049	+	NM_016215 AL512735 AY358903 BC088371 AY358902	31382	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	34196	+	BC012377 TSC_hg19_v1_chr9_+_139560248	34252	+	AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7##BC012377|EGFL7|51162|EGF-like-domain, multiple 7	0.965002	CTCF.p2:25:0.965
chr1	110316407	110316525	reg1001155.p1	16.674	+	AY074930 TSC_hg19_v1_chr1_-_110306546 AK307932 AK310979 AK308196 AK025175 AK225235 BC012926 AK292198 AK290261 NM_024526 NM_133181 NM_139053	-9882	-	BC008790 NM_000849	-32807	-	BT019945 CR542108 AB527634 DQ891834 EU176637 BC000088 EF363096 J05459 AB209816 AK313444 TSC_hg19_v1_chr1_-_110282939 AK304300	-33538	-	NM_000757 NM_172210 NM_172212	136766	+	BC021117 TSC_hg19_v1_chr1_+_110453470 AK291660 M37435 M27087 U22386 AB527768 M64592	137084	+	AF315687 TSC_hg19_v1_chr1_+_110527316	210845	+	AY074930|EPS8L3|79574|EPS8-like 3##AK307932|EPS8L3|79574|EPS8-like 3##AK310979|EPS8L3|79574|EPS8-like 3##AK308196|EPS8L3|79574|EPS8-like 3##AK025175|EPS8L3|79574|EPS8-like 3##AK225235|EPS8L3|79574|EPS8-like 3##BC012926|EPS8L3|79574|EPS8-like 3##AK292198|EPS8L3|79574|EPS8-like 3##AK290261|EPS8L3|79574|EPS8-like 3##NM_024526|EPS8L3|79574|EPS8-like 3##NM_133181|EPS8L3|79574|EPS8-like 3##NM_139053|EPS8L3|79574|EPS8-like 3##BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)##NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)##BT019945|GSTM3|2947|glutathione S-transferase mu 3 (brain)##CR542108|GSTM3|2947|glutathione S-transferase mu 3 (brain)##DQ891834|GSTM3|2947|glutathione S-transferase mu 3 (brain)##EU176637|GSTM3|2947|glutathione S-transferase mu 3 (brain)##BC000088|GSTM3|2947|glutathione S-transferase mu 3 (brain)##EF363096|GSTM3|2947|glutathione S-transferase mu 3 (brain)##J05459|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AB209816|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AK313444|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AK304300|GSTM3|2947|glutathione S-transferase mu 3 (brain)##NM_000757|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172210|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172212|CSF1|1435|colony stimulating factor 1 (macrophage)##BC021117|CSF1|1435|colony stimulating factor 1 (macrophage)##AK291660|CSF1|1435|colony stimulating factor 1 (macrophage)##M37435|CSF1|1435|colony stimulating factor 1 (macrophage)##M27087|CSF1|1435|colony stimulating factor 1 (macrophage)##U22386|CSF1|1435|colony stimulating factor 1 (macrophage)##M64592|CSF1|1435|colony stimulating factor 1 (macrophage)##AF315687|AHCYL1|10768|adenosylhomocysteinase-like 1	0.989455	CTCF.p2:14:0.989
chr3	158152326	158152463	reg1001371.p1	16.673	+	TSC_hg19_v1_chr3_+_157827937 AK300388	-324454	+	TSC_hg19_v1_chr3_+_157827910 AK290334 BC006982 NM_016625 AF208853 BC010357	-324503	+	HQ258019 AJ002367 TSC_hg19_v1_chr3_-_157823847 BC008829 NM_001163678 NM_003030 NM_006884	-328511	-	NM_001130156 NM_001130157 NM_001195432 NM_001195433 NM_001195434 NM_022443 AK056948 AK315402 BC095437 BX647666 AY848700 AY848701 AY848702 BC007045 L49054 AK297488 AK096889	136603	+	TSC_hg19_v1_chr3_+_158362361 AF309777 AF367998 AK000780 NM_024996 BC049210	209935	+	TSC_hg19_v1_chr3_+_158362373 AK315031	209987	+	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1##AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1##NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1##AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1##HQ258019|SHOX2|6474|short stature homeobox 2##AJ002367|SHOX2|6474|short stature homeobox 2##BC008829|SHOX2|6474|short stature homeobox 2##NM_001163678|SHOX2|6474|short stature homeobox 2##NM_003030|SHOX2|6474|short stature homeobox 2##NM_006884|SHOX2|6474|short stature homeobox 2##NM_001130156|MLF1|4291|myeloid leukemia factor 1##NM_001130157|MLF1|4291|myeloid leukemia factor 1##NM_001195432|MLF1|4291|myeloid leukemia factor 1##NM_001195433|MLF1|4291|myeloid leukemia factor 1##NM_001195434|MLF1|4291|myeloid leukemia factor 1##NM_022443|MLF1|4291|myeloid leukemia factor 1##AK056948|MLF1|4291|myeloid leukemia factor 1##AK315402|MLF1|4291|myeloid leukemia factor 1##BC095437|MLF1|4291|myeloid leukemia factor 1##BX647666|MLF1|4291|myeloid leukemia factor 1##AY848700|MLF1|4291|myeloid leukemia factor 1##AY848701|MLF1|4291|myeloid leukemia factor 1##AY848702|MLF1|4291|myeloid leukemia factor 1##BC007045|MLF1|4291|myeloid leukemia factor 1##L49054|MLF1|4291|myeloid leukemia factor 1##AK297488|MLF1|4291|myeloid leukemia factor 1##AK096889|MLF1|4291|myeloid leukemia factor 1##AF309777|GFM1|85476|G elongation factor, mitochondrial 1##AF367998|GFM1|85476|G elongation factor, mitochondrial 1##AK000780|GFM1|85476|G elongation factor, mitochondrial 1##NM_024996|GFM1|85476|G elongation factor, mitochondrial 1##BC049210|GFM1|85476|G elongation factor, mitochondrial 1##AK315031|GFM1|85476|G elongation factor, mitochondrial 1	0.209227	CTCF.p2:5:0.209
chr8	140643212	140643355	reg1000902.p1	16.670	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	-717039	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-1134177	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-4173082	+	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	71999	-	AB067469 TSC_hg19_v1_chr8_-_141467841	824542	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	824575	-	AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9	0.993325	CTCF.p2:10:0.993
chrX	153212881	153213034	reg1001385.p1	16.669	+	D10232 AB527578 BC015558 TSC_hg19_v1_chrX_-_153210096 AK298125 NM_002910	-2813	-	TSC_hg19_v1_chrX_-_153200473 AB528068 AM392552 AM393827 X77588 BC063377 AK296593 AK309083 AY183134 AY183135 BC000308 BC019312 NM_003491 AK294081 AK315997	-12521	-	TSC_hg19_v1_chrX_-_153191719 BC052303 NM_001164741 NM_001666	-21217	-	BC010606 TSC_hg19_v1_chrX_-_153218266	5255	-	TSC_hg19_v1_chrX_-_153236650 L20010 BC063435 NM_005334	23762	-	NM_003492	25033	+	D10232|RENBP|5973|renin binding protein##BC015558|RENBP|5973|renin binding protein##AK298125|RENBP|5973|renin binding protein##NM_002910|RENBP|5973|renin binding protein##AM392552|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AM393827|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##X77588|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##BC063377|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AK296593|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AK309083|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AY183134|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AY183135|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##BC000308|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##BC019312|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##NM_003491|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AK294081|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##BC052303|ARHGAP4|393|Rho GTPase activating protein 4##NM_001164741|ARHGAP4|393|Rho GTPase activating protein 4##NM_001666|ARHGAP4|393|Rho GTPase activating protein 4##BC010606|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##L20010|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##BC063435|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##NM_005334|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##NM_003492|TMEM187|8269|transmembrane protein 187	0.647622	CTCF.p2:-36:0.562
chr8	95092107	95092246	reg1001295.p1	16.666	+	NM_001161778 AB590483 TSC_hg19_v1_chr8_+_94930074 AK302651	-162141	+	NM_018444 TSC_hg19_v1_chr8_+_94929171 BC047619 NM_001161780 AK057079 NM_001161779 BC064978 AF155661 NM_001161781	-162996	+	AK308071 NM_001142301 NM_153704 AK092244 AX747428 TSC_hg19_v1_chr8_+_94767121 AK308735 BX648768 BC031220 BC017974 BC054338 AK094935 BC032835	-325062	+	U07969 BC112013 BC113464 TSC_hg19_v1_chr8_-_95220784 X83228 AK301001 NM_004063	128618	-	AK312873 NM_001144663	137354	-	U10550 TSC_hg19_v1_chr8_-_95274525	182346	-	NM_001161778|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK302651|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_018444|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC047619|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161780|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK057079|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161779|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC064978|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AF155661|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161781|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK308071|TMEM67|91147|transmembrane protein 67##NM_001142301|TMEM67|91147|transmembrane protein 67##NM_153704|TMEM67|91147|transmembrane protein 67##AK092244|TMEM67|91147|transmembrane protein 67##AK308735|TMEM67|91147|transmembrane protein 67##BX648768|TMEM67|91147|transmembrane protein 67##BC031220|TMEM67|91147|transmembrane protein 67##BC017974|TMEM67|91147|transmembrane protein 67##BC054338|TMEM67|91147|transmembrane protein 67##AK094935|TMEM67|91147|transmembrane protein 67##BC032835|TMEM67|91147|transmembrane protein 67##U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle	0.990058	CTCF.p2:-14:0.990
chr5	126116042	126116190	reg1001784.p1	16.664	+	TSC_hg19_v1_chr5_+_126113050 AB527547 DQ891592 EU176582 CU680274	-2992	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	-3234	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	-3285	+	BC146948 BC146964 AF055007 TSC_hg19_v1_chr5_-_126366251 BC047569 AK290129	250059	-	NM_178450	250323	-	AK126569 NM_001164478 NM_001164479	293061	-	DQ891592|LMNB1|4001|lamin B1##EU176582|LMNB1|4001|lamin B1##AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1##BC146948|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146964|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AF055007|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC047569|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK290129|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63	0.17993	
chr11	17405576	17405707	reg1000891.p1	16.663	+	TSC_hg19_v1_chr11_+_17373346 CR749521 NM_001202439 BX537685 BC136797 BC136800	-32300	+	TSC_hg19_v1_chr11_+_17332454 BC172867	-73158	+	TSC_hg19_v1_chr11_+_17298285 EU039832 EU039833 NM_005013 X76732 BC111556 AF450266	-107328	+	BC064497 NM_000525	4564	-	BC040617 AK301550 NM_001166290 TSC_hg19_v1_chr11_-_17410958	5269	-	U63421 HM635782 TSC_hg19_v1_chr11_-_17498355 AK297560 AF087138 L78207 AB209084	92702	-	CR749521|B7H6|374383|B7 homolog 6##NM_001202439|B7H6|374383|B7 homolog 6##BX537685|B7H6|374383|B7 homolog 6##BC136797|B7H6|374383|B7 homolog 6##BC136800|B7H6|374383|B7 homolog 6##EU039832|NUCB2|4925|nucleobindin 2##EU039833|NUCB2|4925|nucleobindin 2##NM_005013|NUCB2|4925|nucleobindin 2##X76732|NUCB2|4925|nucleobindin 2##BC111556|NUCB2|4925|nucleobindin 2##AF450266|NUCB2|4925|nucleobindin 2##BC064497|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##NM_000525|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##BC040617|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##AK301550|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##NM_001166290|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##U63421|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##HM635782|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AK297560|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AF087138|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##L78207|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AB209084|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	0.999935	CTCF.p2:2:1.000
chr11	111712307	111712430	reg1001294.p1	16.661	+	AB384965 DQ890606 DQ894107 EU176538 AK292275 AK293388 AK294716 TSC_hg19_v1_chr11_-_111637114 BC027596 AK296455 AK301705 AF087438 AF163473 NM_001177562 NM_001177563 NM_002716 NM_181699 NM_181700	-75242	-	M65254 TSC_hg19_v1_chr11_-_111637059	-75338	-	TSC_hg19_v1_chr11_+_111473176 NM_015191 AK291233 AL136764 AB018324 AB096248 AK000396 BC113459 BC117183 AB084424	-239135	+	TSC_hg19_v1_chr11_-_111742001 NM_001077691 NM_001077692	29650	-	TSC_hg19_v1_chr11_-_111742285 DQ892761 DQ896006 AM393011 AM393178 AB527104 CU679277 AL136927 BC009255 AF395532 AK308025 AK225261 AK298811 AK025498 NM_001077690 NM_024740	29887	-	AK300795 BC006136 TSC_hg19_v1_chr11_-_111749888 BC127680	37490	-	DQ890606|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##DQ894107|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##EU176538|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK292275|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK293388|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK294716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##BC027596|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK296455|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK301705|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF087438|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF163473|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177562|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177563|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_002716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181699|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181700|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##M65254|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_015191|SIK2|23235|salt-inducible kinase 2##AK291233|SIK2|23235|salt-inducible kinase 2##AL136764|SIK2|23235|salt-inducible kinase 2##AB018324|SIK2|23235|salt-inducible kinase 2##AB096248|SIK2|23235|salt-inducible kinase 2##AK000396|SIK2|23235|salt-inducible kinase 2##BC113459|SIK2|23235|salt-inducible kinase 2##BC117183|SIK2|23235|salt-inducible kinase 2##AB084424|SIK2|23235|salt-inducible kinase 2##NM_001077691|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_001077692|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##DQ892761|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##DQ896006|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AM393011|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AM393178|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AL136927|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##BC009255|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AF395532|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK308025|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK225261|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK298811|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK025498|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_001077690|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_024740|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK300795|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1##BC006136|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1##BC127680|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	0.998835	CTCF.p2:6:0.999
chr8	27918701	27918830	reg1001518.p1	16.661	+	NM_173833	-68397	-	TSC_hg19_v1_chr8_-_27695574 AK301836	-223206	-	TSC_hg19_v1_chr8_-_27695325 AF189722 AB027250 AK027291 AF237709 BC015191 AB027249 NM_018492	-223418	-	AB075870 NM_001010906	22622	-	NM_018091 TSC_hg19_v1_chr8_+_27950679 AK302140 AK296475 AK022626 AK295574 AK001284 AK293424 AK315985 AK316053 AK298265 BC001240 AL834273 AB463602 AM392633	31892	+	NM_006228 U48263 TSC_hg19_v1_chr8_+_28174784 AK289633 AY335948 BC034758	255960	+	NM_173833|SCARA5|286133|scavenger receptor class A, member 5 (putative)##AK301836|PBK|55872|PDZ binding kinase##AF189722|PBK|55872|PDZ binding kinase##AB027250|PBK|55872|PDZ binding kinase##AK027291|PBK|55872|PDZ binding kinase##AF237709|PBK|55872|PDZ binding kinase##BC015191|PBK|55872|PDZ binding kinase##AB027249|PBK|55872|PDZ binding kinase##NM_018492|PBK|55872|PDZ binding kinase##AB075870|C8orf80|389643|chromosome 8 open reading frame 80##NM_001010906|C8orf80|389643|chromosome 8 open reading frame 80##NM_018091|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK302140|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK296475|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK022626|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK295574|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK001284|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK293424|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK315985|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK316053|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK298265|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##BC001240|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AL834273|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AM392633|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##NM_006228|PNOC|5368|prepronociceptin##U48263|PNOC|5368|prepronociceptin##AK289633|PNOC|5368|prepronociceptin##AY335948|PNOC|5368|prepronociceptin##BC034758|PNOC|5368|prepronociceptin	1.025293	CTCF.p2:-5:1.000
chr7	138423591	138423713	reg1001257.p1	16.659	+	NM_001139456	-59863	-	BC036796 NM_174959	-74684	-	AF119042 BC028689 TSC_hg19_v1_chr7_+_138145183 AB528587 AF009353	-278416	+	NM_130841	35129	-	BC131697 AK055841 NM_001085429 BC058028	59071	+	BC109304 BC109305 AF245517 AK292945 NM_020632 NM_130840	59242	-	NM_001139456|SVOPL|136306|SVOP-like##BC036796|SVOPL|136306|SVOP-like##NM_174959|SVOPL|136306|SVOP-like##AF119042|TRIM24|8805|tripartite motif containing 24##BC028689|TRIM24|8805|tripartite motif containing 24##AF009353|TRIM24|8805|tripartite motif containing 24##NM_130841|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC131697|TMEM213|155006|transmembrane protein 213##AK055841|TMEM213|155006|transmembrane protein 213##NM_001085429|TMEM213|155006|transmembrane protein 213##BC058028|TMEM213|155006|transmembrane protein 213##BC109304|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC109305|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AF245517|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AK292945|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_020632|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_130840|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4	0.999674	CTCF.p2:6:0.964
chr19	3665983	3666103	reg1001018.p1	16.658	+	BC004149 TSC_hg19_v1_chr19_-_3632587	-33527	-	TSC_hg19_v1_chr19_-_3626795 AY917150 NM_001080543 NM_021231	-39242	-	TSC_hg19_v1_chr19_-_3626774 AK299963	-39262	-	FJ965536 FJ965537 TSC_hg19_v1_chr19_-_3700457 AB385354 AB011161	34379	-	AK301309 TSC_hg19_v1_chr19_-_3700461 AK315912	34417	-	TSC_hg19_v1_chr19_-_3700467 NM_001195733 NM_012398	34431	-	BC004149|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AY917150|C19orf29|58509|chromosome 19 open reading frame 29##NM_001080543|C19orf29|58509|chromosome 19 open reading frame 29##NM_021231|C19orf29|58509|chromosome 19 open reading frame 29##AK299963|C19orf29|58509|chromosome 19 open reading frame 29##FJ965536|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##FJ965537|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AB011161|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AK301309|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AK315912|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##NM_001195733|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##NM_012398|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma	0.994784	CTCF.p2:-17:0.995
chr17	7755210	7755323	reg1000690.p2	16.657	+	AB002344 NM_001080424	-12033	+	TSC_hg19_v1_chr17_+_7741696 BC067879	-13593	+	NM_020877 AB385476 AB463017	-132221	+	TSC_hg19_v1_chr17_+_7758383 AK000032 BC057812 NM_203411	3116	+	DQ893290 DQ893319 DQ896634 AF530060 CU687386 BC059944 TSC_hg19_v1_chr17_-_7760878 BC006407	5554	-	AK057061 NM_144607	5797	+	AB002344|KDM6B|23135|lysine (K)-specific demethylase 6B##NM_001080424|KDM6B|23135|lysine (K)-specific demethylase 6B##NM_020877|DNAH2|146754|dynein, axonemal, heavy chain 2##AK000032|TMEM88|92162|transmembrane protein 88##BC057812|TMEM88|92162|transmembrane protein 88##NM_203411|TMEM88|92162|transmembrane protein 88##DQ893290|LSMD1|84316|LSM domain containing 1##DQ893319|LSMD1|84316|LSM domain containing 1##DQ896634|LSMD1|84316|LSM domain containing 1##AF530060|LSMD1|84316|LSM domain containing 1##BC059944|LSMD1|84316|LSM domain containing 1##BC006407|LSMD1|84316|LSM domain containing 1##AK057061|CYB5D1|124637|cytochrome b5 domain containing 1##NM_144607|CYB5D1|124637|cytochrome b5 domain containing 1	0.824855	CTCF.p2:-2:0.825
chr16	19387025	19387144	reg1000963.p1	16.656	+	TSC_hg19_v1_chr16_+_19179561 NM_016524 BC004518 AF220560 AB527504 CU678742	-207333	+	TSC_hg19_v1_chr16_+_19125253 AK096327 NM_001034841	-261836	+	TSC_hg19_v1_chr16_+_19079232 AL136647 NM_001190983 BC043272	-307819	+	BC070101 NM_001105248 NM_001105249	34972	+	AY236494 NM_024780 BC038118 AK097718 BC027602 AK131202	80720	+	AY463154 BC014981 TSC_hg19_v1_chr16_-_19533421 AF306698 BC025273 BC001538 AF212862 BC012153 AK312912 NM_016641	146292	-	NM_016524|SYT17|51760|synaptotagmin XVII##BC004518|SYT17|51760|synaptotagmin XVII##AF220560|SYT17|51760|synaptotagmin XVII##AK096327|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##NM_001034841|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##AL136647|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_001190983|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC043272|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC070101|TMC5|79838|transmembrane channel-like 5##NM_001105248|TMC5|79838|transmembrane channel-like 5##NM_001105249|TMC5|79838|transmembrane channel-like 5##AY236494|TMC5|79838|transmembrane channel-like 5##NM_024780|TMC5|79838|transmembrane channel-like 5##BC038118|TMC5|79838|transmembrane channel-like 5##AK097718|TMC5|79838|transmembrane channel-like 5##BC027602|TMC5|79838|transmembrane channel-like 5##AK131202|TMC5|79838|transmembrane channel-like 5##AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1##NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1	0.97243	CTCF.p2:17:0.972
chr19	1194611	1194751	reg1001521.p1	16.656	+	TSC_hg19_v1_chr19_-_1174268 AK300981 AK292407 NM_014963	-20402	-	TSC_hg19_v1_chr19_-_1174260 AB023180	-20422	-	TSC_hg19_v1_chr19_-_1174256 BC052799	-20453	-	TSC_hg19_v1_chr19_+_1205777 NM_000455 AF217978	11125	+	BC007981 AF035625 BC019334 AK314858 AB209553 EF644172 DQ893232 DQ896561 AB528360 CU675883 U63333 TSC_hg19_v1_chr19_+_1206921	12010	+	BC146278 BC148727 TSC_hg19_v1_chr19_+_1207211	12492	+	AK300981|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##AK292407|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##NM_014963|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##AB023180|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##NM_000455|STK11|6794|serine/threonine kinase 11##AF217978|STK11|6794|serine/threonine kinase 11##BC007981|STK11|6794|serine/threonine kinase 11##AF035625|STK11|6794|serine/threonine kinase 11##BC019334|STK11|6794|serine/threonine kinase 11##AK314858|STK11|6794|serine/threonine kinase 11##AB209553|STK11|6794|serine/threonine kinase 11##EF644172|STK11|6794|serine/threonine kinase 11##DQ893232|STK11|6794|serine/threonine kinase 11##DQ896561|STK11|6794|serine/threonine kinase 11##U63333|STK11|6794|serine/threonine kinase 11##BC146278|EFNA2|1943|ephrin-A2##BC148727|EFNA2|1943|ephrin-A2	0.990801	CTCF.p2:-2:0.991
chr17	32688620	32688757	reg1001152.p1	16.655	+	NM_005408 U59808 AJ001634 BC008621 U46767 X98306 AB463483 CU679005 DQ891497 DQ894688 BT007385 CR450337 Z77650	-5157	+	Y16645 NM_005623	-42627	+	NM_002986 BC017850 Z69291 Z75668 U46573 Z75669 DQ891969 DQ895158 AB463482 CR457421	-75932	+	AB528767 BC105073 BC105075 M57502 AK312183 NM_002981	1527	-	BC133004 BC136710 BC142651 AK126768 NM_207454	217664	-	NM_207313	219079	+	NM_005408|CCL13|6357|chemokine (C-C motif) ligand 13##U59808|CCL13|6357|chemokine (C-C motif) ligand 13##AJ001634|CCL13|6357|chemokine (C-C motif) ligand 13##BC008621|CCL13|6357|chemokine (C-C motif) ligand 13##U46767|CCL13|6357|chemokine (C-C motif) ligand 13##X98306|CCL13|6357|chemokine (C-C motif) ligand 13##DQ891497|CCL13|6357|chemokine (C-C motif) ligand 13##DQ894688|CCL13|6357|chemokine (C-C motif) ligand 13##BT007385|CCL13|6357|chemokine (C-C motif) ligand 13##CR450337|CCL13|6357|chemokine (C-C motif) ligand 13##Z77650|CCL13|6357|chemokine (C-C motif) ligand 13##Y16645|CCL8|6355|chemokine (C-C motif) ligand 8##NM_005623|CCL8|6355|chemokine (C-C motif) ligand 8##NM_002986|CCL11|6356|chemokine (C-C motif) ligand 11##BC017850|CCL11|6356|chemokine (C-C motif) ligand 11##Z69291|CCL11|6356|chemokine (C-C motif) ligand 11##Z75668|CCL11|6356|chemokine (C-C motif) ligand 11##U46573|CCL11|6356|chemokine (C-C motif) ligand 11##Z75669|CCL11|6356|chemokine (C-C motif) ligand 11##DQ891969|CCL11|6356|chemokine (C-C motif) ligand 11##DQ895158|CCL11|6356|chemokine (C-C motif) ligand 11##CR457421|CCL11|6356|chemokine (C-C motif) ligand 11##BC105073|CCL1|6346|chemokine (C-C motif) ligand 1##BC105075|CCL1|6346|chemokine (C-C motif) ligand 1##M57502|CCL1|6346|chemokine (C-C motif) ligand 1##AK312183|CCL1|6346|chemokine (C-C motif) ligand 1##NM_002981|CCL1|6346|chemokine (C-C motif) ligand 1##BC133004|C17orf102|400591|chromosome 17 open reading frame 102##BC136710|C17orf102|400591|chromosome 17 open reading frame 102##BC142651|C17orf102|400591|chromosome 17 open reading frame 102##AK126768|C17orf102|400591|chromosome 17 open reading frame 102##NM_207454|C17orf102|400591|chromosome 17 open reading frame 102##NM_207313|TMEM132E|124842|transmembrane protein 132E	0.347046	CTCF.p2:41:0.331
chr19	9906966	9907101	reg1001307.p1	16.653	+	BC037359 TSC_hg19_v1_chr19_-_9879296 AK308938 AK289536 AK097652 NM_001077624	-27708	-	AK296815 NM_001199814	-95562	-	TSC_hg19_v1_chr19_-_9785777 AK300115 AK297446 AK303038 AK304370 NM_001130031 NM_001130032 NM_017656	-121265	-	CU674772 TSC_hg19_v1_chr19_-_9929496	22459	-	TSC_hg19_v1_chr19_-_9929504 BX647073	22479	-	BC001586 AK000195 NM_017703 TSC_hg19_v1_chr19_-_9929754 AK093760 AK027004	22692	-	BC037359|ZNF846|162993|zinc finger protein 846##AK308938|ZNF846|162993|zinc finger protein 846##AK097652|ZNF846|162993|zinc finger protein 846##NM_001077624|ZNF846|162993|zinc finger protein 846##AK296815|ZNF812|729648|zinc finger protein 812##NM_001199814|ZNF812|729648|zinc finger protein 812##AK300115|ZNF562|54811|zinc finger protein 562##AK297446|ZNF562|54811|zinc finger protein 562##AK303038|ZNF562|54811|zinc finger protein 562##AK304370|ZNF562|54811|zinc finger protein 562##NM_001130031|ZNF562|54811|zinc finger protein 562##NM_001130032|ZNF562|54811|zinc finger protein 562##NM_017656|ZNF562|54811|zinc finger protein 562##BX647073|FBXL12|54850|F-box and leucine-rich repeat protein 12##BC001586|FBXL12|54850|F-box and leucine-rich repeat protein 12##AK000195|FBXL12|54850|F-box and leucine-rich repeat protein 12##NM_017703|FBXL12|54850|F-box and leucine-rich repeat protein 12##AK093760|FBXL12|54850|F-box and leucine-rich repeat protein 12##AK027004|FBXL12|54850|F-box and leucine-rich repeat protein 12	0.998563	CTCF.p2:0:0.999
chr4	87843658	87843776	reg1001087.p1	16.651	+	BC016746 BC063410 NM_144645	-30157	-	AJ583502 BC107051 BC107052 EF437223 NM_197965	-73376	-	TSC_hg19_v1_chr4_+_87515468 AK056151 NM_006264 NM_080683 NM_080684 NM_080685 BC139915 U12132 U12129 U12130	-328244	+	TSC_hg19_v1_chr4_+_87856199 AK296149 NM_001166693 AK300364 BC017432 AK302199	12498	+	TSC_hg19_v1_chr4_+_87857481 L13743	13766	+	TSC_hg19_v1_chr4_+_87928422 L13773 BC114930 NM_005935 AK296243 L25050 AB385236	84604	+	BC016746|C4orf36|132989|chromosome 4 open reading frame 36##BC063410|C4orf36|132989|chromosome 4 open reading frame 36##NM_144645|C4orf36|132989|chromosome 4 open reading frame 36##AJ583502|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC107051|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC107052|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##EF437223|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##NM_197965|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##AK056151|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_006264|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080683|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080684|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080685|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##BC139915|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##U12132|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##U12129|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##AK296149|AFF1|4299|AF4/FMR2 family, member 1##NM_001166693|AFF1|4299|AF4/FMR2 family, member 1##AK300364|AFF1|4299|AF4/FMR2 family, member 1##BC017432|AFF1|4299|AF4/FMR2 family, member 1##L13773|AFF1|4299|AF4/FMR2 family, member 1##BC114930|AFF1|4299|AF4/FMR2 family, member 1##NM_005935|AFF1|4299|AF4/FMR2 family, member 1##AK296243|AFF1|4299|AF4/FMR2 family, member 1##L25050|AFF1|4299|AF4/FMR2 family, member 1	0.995188	CTCF.p2:-10:0.995
chr20	55956960	55957089	reg1001417.p1	16.649	+	NM_001190472	-22147	-	AK292247 AY349350 NM_001015885	-30423	+	TSC_hg19_v1_chr20_+_55926310 BC103754 AK309743 AK309069 U84720 BC106923 BC106924	-30702	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	9433	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	143177	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	179133	+	NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC103754|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AK309743|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AK309069|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##U84720|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC106923|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC106924|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)	0.999364	CTCF.p2:-8:0.999
chr17	26087214	26087328	reg1000710.p1	16.646	+	TSC_hg19_v1_chr17_+_25958264 AB003517 AB008492	-128999	+	TSC_hg19_v1_chr17_+_25958246 BC105942 BC105944	-129023	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	-129043	+	U31511 TSC_hg19_v1_chr17_-_26127402	40127	-	BC130283 BC144126 U05810 L09210 X73029 AF068236 AK304252 NM_000625 TSC_hg19_v1_chr17_-_26127556	40244	-	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	133120	-	AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC105942|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC105944|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9##U31511|NOS2|4843|nitric oxide synthase 2, inducible##BC130283|NOS2|4843|nitric oxide synthase 2, inducible##BC144126|NOS2|4843|nitric oxide synthase 2, inducible##U05810|NOS2|4843|nitric oxide synthase 2, inducible##L09210|NOS2|4843|nitric oxide synthase 2, inducible##X73029|NOS2|4843|nitric oxide synthase 2, inducible##AF068236|NOS2|4843|nitric oxide synthase 2, inducible##AK304252|NOS2|4843|nitric oxide synthase 2, inducible##NM_000625|NOS2|4843|nitric oxide synthase 2, inducible##AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108	0.999966	CTCF.p2:-25:1.000
chr14	72980862	72981023	reg1000868.p1	16.643	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-581076	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-581789	+	AK294895 NM_001204423	-582126	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	379866	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	412193	+	AK098542 AF311602 NM_178441	472715	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.989505	CTCF.p2:4:0.990
chr2	127535048	127535225	reg1001100.p3	16.642	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-121344	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-121429	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2752272	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	329605	-	BC039307 NM_001001665	428206	-	AK131190 TSC_hg19_v1_chr2_-_127977781	442581	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.138022	
chr14	73938920	73939046	reg1001279.p1	16.640	+	TSC_hg19_v1_chr14_-_73925284 BC068476 NM_001005743 NM_001005744 NM_001005745 NM_003744	-13692	-	TSC_hg19_v1_chr14_-_73925274 BX248781	-13716	-	BX248775 TSC_hg19_v1_chr14_-_73925232 BX647137 AF171938 AF171939 AF171940 AF171941 BX248073 AF015040 AK315130 BC020788	-13751	-	TSC_hg19_v1_chr14_+_73957638 NM_024644	18642	+	TSC_hg19_v1_chr14_+_73957669 AK299994 AK025455 BC011350	18680	+	TSC_hg19_v1_chr14_+_73957674 AY390535	18690	+	BC068476|NUMB|8650|numb homolog (Drosophila)##NM_001005743|NUMB|8650|numb homolog (Drosophila)##NM_001005744|NUMB|8650|numb homolog (Drosophila)##NM_001005745|NUMB|8650|numb homolog (Drosophila)##NM_003744|NUMB|8650|numb homolog (Drosophila)##BX248781|NUMB|8650|numb homolog (Drosophila)##BX248775|NUMB|8650|numb homolog (Drosophila)##BX647137|NUMB|8650|numb homolog (Drosophila)##AF171938|NUMB|8650|numb homolog (Drosophila)##AF171939|NUMB|8650|numb homolog (Drosophila)##AF171940|NUMB|8650|numb homolog (Drosophila)##AF171941|NUMB|8650|numb homolog (Drosophila)##BX248073|NUMB|8650|numb homolog (Drosophila)##AF015040|NUMB|8650|numb homolog (Drosophila)##AK315130|NUMB|8650|numb homolog (Drosophila)##BC020788|NUMB|8650|numb homolog (Drosophila)##NM_024644|C14orf169|79697|chromosome 14 open reading frame 169##AK299994|C14orf169|79697|chromosome 14 open reading frame 169##AK025455|C14orf169|79697|chromosome 14 open reading frame 169##BC011350|C14orf169|79697|chromosome 14 open reading frame 169##AY390535|C14orf169|79697|chromosome 14 open reading frame 169	0.805903	CTCF.p2:11:0.806
chr9	66571535	66571665	reg1001313.p1	16.636	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-18325	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-77404	-	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	-113104	-	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	1355216	+	TSC_hg19_v1_chr9_+_68726468 AK311167	2154902	+	TSC_hg19_v1_chr9_+_69065493 AK311167	2493938	+	BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene	0.964718	CTCF.p2:-3:0.965
chrUn_gl000219	99739	99919	reg1019047.p1	16.636	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0303	
chr17	17715670	17715798	reg1001515.p1	16.632	+	TSC_hg19_v1_chr17_+_17608164 AF147359	-107536	+	TSC_hg19_v1_chr17_+_17584772 AB058723 AY172136 NM_030665	-130949	+	TSC_hg19_v1_chr17_-_17495007 CU690728 AF044214 AF113126 BC000557 BC050593 NM_148172 AK302251	-220759	-	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	11170	-	TSC_hg19_v1_chr17_-_17740301 U00968 BC063281	24561	-	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	24590	-	AB058723|RAI1|10743|retinoic acid induced 1##AY172136|RAI1|10743|retinoic acid induced 1##NM_030665|RAI1|10743|retinoic acid induced 1##AF044214|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF113126|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC000557|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC050593|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_148172|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AK302251|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1##U00968|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC063281|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1	0.997475	CTCF.p2:-7:0.997
chr19	19256965	19257068	reg1000962.p1	16.630	+	TSC_hg19_v1_chr19_-_19249268 BC005210 AK096964	-7741	-	TSC_hg19_v1_chr19_-_19249264 AK225424 AK000429 NM_017814	-7762	-	TSC_hg19_v1_chr19_+_19174802 NM_178526 BC045598 FN356975	-82207	+	TSC_hg19_v1_chr19_-_19281067 AK057210	24051	-	TSC_hg19_v1_chr19_-_19281094 NM_001145785	24077	-	TSC_hg19_v1_chr19_-_19302962 X68502 EU831418 EU831443 EU831511 EU831535 X63380 BC064537 BC000489 BC004449 BC010178 BC010931 AK301086 AK316328 BC157868 BC171869	45948	-	BC005210|TMEM161A|54929|transmembrane protein 161A##AK096964|TMEM161A|54929|transmembrane protein 161A##AK225424|TMEM161A|54929|transmembrane protein 161A##AK000429|TMEM161A|54929|transmembrane protein 161A##NM_017814|TMEM161A|54929|transmembrane protein 161A##NM_178526|SLC25A42|284439|solute carrier family 25, member 42##BC045598|SLC25A42|284439|solute carrier family 25, member 42##FN356975|SLC25A42|284439|solute carrier family 25, member 42##AK057210|MEF2B|100271849|myocyte enhancer factor 2B##NM_001145785|MEF2B|100271849|myocyte enhancer factor 2B##X68502|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##EU831418|MEF2BNB|729991|MEF2B neighbor##EU831443|MEF2BNB|729991|MEF2B neighbor##EU831511|MEF2BNB|729991|MEF2B neighbor##EU831535|MEF2BNB|729991|MEF2B neighbor##X63380|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##BC064537|MEF2BNB|729991|MEF2B neighbor##BC000489|MEF2BNB|729991|MEF2B neighbor##BC004449|MEF2BNB|729991|MEF2B neighbor##BC010178|MEF2BNB|729991|MEF2B neighbor##BC010931|MEF2BNB|729991|MEF2B neighbor##AK301086|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##AK316328|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##BC157868|MEF2BNB|729991|MEF2B neighbor##BC171869|MEF2BNB|729991|MEF2B neighbor	0.998579	CTCF.p2:4:0.999
chr12	49012347	49012459	reg1001079.p1	16.628	+	AB590798 CR541987 CR542017 HQ258062 J00270 BC112316 BC112318 BC069103 NM_002289	-48588	-	NM_001005203	-92989	+	NM_152319	-136118	+	TSC_hg19_v1_chr12_-_49075997 AK000443 BC009746 AK094528 NM_017822	63615	-	AF045161 EF688064 TSC_hg19_v1_chr12_-_49110514 AF048730 AK290990 NM_001240	98215	-	AK225224 NM_015270 AF250226	165490	-	CR541987|LALBA|3906|lactalbumin, alpha-##CR542017|LALBA|3906|lactalbumin, alpha-##HQ258062|LALBA|3906|lactalbumin, alpha-##J00270|LALBA|3906|lactalbumin, alpha-##BC112316|LALBA|3906|lactalbumin, alpha-##BC112318|LALBA|3906|lactalbumin, alpha-##BC069103|LALBA|3906|lactalbumin, alpha-##NM_002289|LALBA|3906|lactalbumin, alpha-##NM_001005203|OR8S1|341568|olfactory receptor, family 8, subfamily S, member 1##NM_152319|C12orf54|121273|chromosome 12 open reading frame 54##AK000443|KANSL2|54934|KAT8 regulatory NSL complex subunit 2##BC009746|KANSL2|54934|KAT8 regulatory NSL complex subunit 2##AK094528|KANSL2|54934|KAT8 regulatory NSL complex subunit 2##NM_017822|KANSL2|54934|KAT8 regulatory NSL complex subunit 2##AF045161|CCNT1|904|cyclin T1##EF688064|CCNT1|904|cyclin T1##AF048730|CCNT1|904|cyclin T1##AK290990|CCNT1|904|cyclin T1##NM_001240|CCNT1|904|cyclin T1##AK225224|ADCY6|112|adenylate cyclase 6##NM_015270|ADCY6|112|adenylate cyclase 6##AF250226|ADCY6|112|adenylate cyclase 6	0.699149	CTCF.p2:19:0.699
chr17	79979121	79979252	reg1001282.p1	16.626	+	TSC_hg19_v1_chr17_+_79935513 AF324219 AK290624 AK057851 BC018722 CU676290 DQ892522 DQ895734 AK226086	-43664	+	TSC_hg19_v1_chr17_+_79935477 AK057403 NM_001251888 NM_024083	-43738	+	NM_178493 TSC_hg19_v1_chr17_-_79919064 BC060882	-60124	-	TSC_hg19_v1_chr17_-_79980755 BC011610 U95006 U95007 BC009571 NM_144998	1545	-	TSC_hg19_v1_chr17_+_79981196 BC014109 NM_144999	2047	+	TSC_hg19_v1_chr17_+_79989582 BC009605 BC015197 NM_005052 AF008591 AB528368 DQ893123 DQ896400 CU679415 AF498966 BT019443	10375	+	AF324219|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK290624|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK057851|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##BC018722|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##DQ892522|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##DQ895734|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK226086|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK057403|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##NM_001251888|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##NM_024083|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##NM_178493|NOTUM|147111|notum pectinacetylesterase homolog (Drosophila)##BC060882|NOTUM|147111|notum pectinacetylesterase homolog (Drosophila)##BC011610|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##U95006|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##U95007|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##BC009571|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##NM_144998|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##BC014109|LRRC45|201255|leucine rich repeat containing 45##NM_144999|LRRC45|201255|leucine rich repeat containing 45##BC009605|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##BC015197|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##NM_005052|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##AF008591|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##DQ893123|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##DQ896400|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##AF498966|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##BT019443|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)	1.741796	CTCF.p2:6:0.999	CTCF.p2:-104:0.743
chr19	33897853	33897970	reg1001170.p1	16.626	+	NM_001252296	-32482	+	NM_001806 TSC_hg19_v1_chr19_+_33864635 U20240 BC013128 AK313634	-33259	+	TSC_hg19_v1_chr19_+_33793749 BC027959 AK022417 BC113872 BC114482	-104052	+	TSC_hg19_v1_chr19_-_34012698 BT006692 CR541669 CU677179 DQ891114 DQ894294 BC004305 BC028295 AK225037 AK290756 J04605 AK293126 AK290781 AK291561 AK294619 BC015027 NM_000285 NM_001166056 NM_001166057	114801	-	TSC_hg19_v1_chr19_+_34112858 NM_001127895 NM_001127896 BC014250 BC011380 AB047801	215024	+	BC018723 NM_022467	277522	+	NM_001252296|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##NM_001806|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##U20240|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##BC013128|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##AK313634|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##BC027959|LOC80054|80054|uncharacterized LOC80054##AK022417|LOC80054|80054|uncharacterized LOC80054##BC113872|LOC80054|80054|uncharacterized LOC80054##BC114482|LOC80054|80054|uncharacterized LOC80054##BT006692|PEPD|5184|peptidase D##CR541669|PEPD|5184|peptidase D##DQ891114|PEPD|5184|peptidase D##DQ894294|PEPD|5184|peptidase D##BC004305|PEPD|5184|peptidase D##BC028295|PEPD|5184|peptidase D##AK225037|PEPD|5184|peptidase D##AK290756|PEPD|5184|peptidase D##J04605|PEPD|5184|peptidase D##AK293126|PEPD|5184|peptidase D##AK290781|PEPD|5184|peptidase D##AK291561|PEPD|5184|peptidase D##AK294619|PEPD|5184|peptidase D##BC015027|PEPD|5184|peptidase D##NM_000285|PEPD|5184|peptidase D##NM_001166056|PEPD|5184|peptidase D##NM_001166057|PEPD|5184|peptidase D##NM_001127895|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127896|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC014250|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC011380|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##AB047801|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	0.999464	CTCF.p2:11:0.999
chr15	78910870	78910984	reg1001015.p1	16.619	+	TSC_hg19_v1_chr15_+_78857888 NM_000745 BC033639 U62434 AF385586 M83712 CU689678 DQ893355 DQ896674 EU176798 Y08419	-52983	+	TSC_hg19_v1_chr15_+_78832790 D28362 BC030529 AL110100 BC022445 BC093069 BC047667 D00763	-78111	+	NM_001102667 NM_001102668 NM_002789 TSC_hg19_v1_chr15_+_78832785 BC005361 AK055714 AK315526	-78162	+	AF385584 Y08418 BT006646 BT006897 CU674246 CU675253 M86383 M37981 TSC_hg19_v1_chr15_-_78913298 BC000513 BC001642 BC002996 U62432	2306	-	TSC_hg19_v1_chr15_-_78913532 BC098443 BC006114 NM_000743 NM_001166694	2645	-	TSC_hg19_v1_chr15_-_78933573 U62439 Y08416 BC096080 BC096081 BC096082 BC096083 NM_000750 U48861	22646	-	NM_000745|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##BC033639|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##U62434|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##AF385586|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##M83712|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##DQ893355|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##DQ896674|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##EU176798|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##Y08419|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##D28362|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC030529|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##AL110100|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC022445|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC093069|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC047667|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##D00763|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##NM_001102667|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##NM_001102668|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##NM_002789|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC005361|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##AK055714|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##AK315526|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##AF385584|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##Y08418|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006646|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006897|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##M37981|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC000513|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC001642|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC002996|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##U62432|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC098443|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC006114|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_000743|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_001166694|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##U62439|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##Y08416|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096080|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096081|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096082|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096083|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##NM_000750|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##U48861|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4	0.999873	CTCF.p2:0:1.000
chr6	11144716	11144854	reg1001459.p1	16.619	+	AK123938 BC068585 NM_207582	-32773	-	BC032356 NM_001135575 TSC_hg19_v1_chr6_+_11094342	-50482	+	TSC_hg19_v1_chr6_+_11094066 AK058186	-50728	+	U64317 BC020686 TSC_hg19_v1_chr6_-_11232894 BC050740 BC040207	88106	-	L43821 TSC_hg19_v1_chr6_-_11232900	88115	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	88125	-	AK123938|ERVFRD-1|405754|endogenous retrovirus group FRD, member 1##BC068585|ERVFRD-1|405754|endogenous retrovirus group FRD, member 1##NM_207582|ERVFRD-1|405754|endogenous retrovirus group FRD, member 1##BC032356|C6orf228|221710|chromosome 6 open reading frame 228##NM_001135575|C6orf228|221710|chromosome 6 open reading frame 228##AK058186|C6orf228|221710|chromosome 6 open reading frame 228##U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	0.985299	CTCF.p2:-9:0.985
chr1	43379174	43379269	reg1000723.p1	16.617	+	TSC_hg19_v1_chr1_+_43312304 AK296201	-66916	+	AK095184 TSC_hg19_v1_chr1_+_43312290	-66932	+	TSC_hg19_v1_chr1_+_43312284 AF131739	-66948	+	AB384810 BC118590 BC121804 TSC_hg19_v1_chr1_-_43424504 K03195	45201	-	TSC_hg19_v1_chr1_-_43424540 AK292791 AK293306 AK296736 AK312403 AB208987	45351	-	TSC_hg19_v1_chr1_-_43424834 NM_006516	45619	-	AK296201|ZNF691|51058|zinc finger protein 691##AF131739|ZNF691|51058|zinc finger protein 691##BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##NM_006516|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	0.0	
chr1	110750503	110750633	reg1001421.p1	16.614	+	NM_001010898 AK289982 TSC_hg19_v1_chr1_+_110693135	-57434	+	AK098556 NM_203412 BC058929	-95493	+	AF008203 BC112007 BC113428 NM_006492	-137291	-	TSC_hg19_v1_chr1_+_110753347 NM_001039574 NM_004978	2776	+	AK310193 M64676 TSC_hg19_v1_chr1_+_110754079 BC101769	3429	+	AF368062 AF368063 AF368064 NM_001201545 NM_022768 BC098140 BC103493 BC103507 BC103660 TSC_hg19_v1_chr1_+_110882045	131426	+	NM_001010898|SLC6A17|388662|solute carrier family 6, member 17##AK289982|SLC6A17|388662|solute carrier family 6, member 17##AK098556|UBL4B|164153|ubiquitin-like 4B##NM_203412|UBL4B|164153|ubiquitin-like 4B##BC058929|UBL4B|164153|ubiquitin-like 4B##AF008203|ALX3|257|ALX homeobox 3##BC112007|ALX3|257|ALX homeobox 3##BC113428|ALX3|257|ALX homeobox 3##NM_006492|ALX3|257|ALX homeobox 3##NM_001039574|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_004978|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##AK310193|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##M64676|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##BC101769|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##AF368062|RBM15|64783|RNA binding motif protein 15##AF368063|RBM15|64783|RNA binding motif protein 15##AF368064|RBM15|64783|RNA binding motif protein 15##NM_001201545|RBM15|64783|RNA binding motif protein 15##NM_022768|RBM15|64783|RNA binding motif protein 15##BC098140|RBM15|64783|RNA binding motif protein 15##BC103493|RBM15|64783|RNA binding motif protein 15##BC103507|RBM15|64783|RNA binding motif protein 15##BC103660|RBM15|64783|RNA binding motif protein 15	0.999315	CTCF.p2:-10:0.999
chr17	66168665	66168807	reg1001365.p1	16.612	+	TSC_hg19_v1_chr17_+_66097706 BC045718	-71038	+	TSC_hg19_v1_chr17_+_66031889 BC034443	-136848	+	TSC_hg19_v1_chr17_+_66031850 NM_002266 U09559 U28386 AK024833 AK058111 AK291954 BC005978 BC013257 BC053343 BC146905	-136896	+	NM_001033569 NM_001033570 NM_001033571 NM_001033572 NM_001033574 NM_016627 TSC_hg19_v1_chr17_+_66244216 BC056271 BC050709	75444	+	TSC_hg19_v1_chr17_+_66244233 AF208856	75507	+	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	86598	+	BC045718|LOC100499466|100499466|uncharacterized LOC100499466##BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##NM_001033569|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033570|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033571|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033572|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033574|AMZ2|51321|archaelysin family metallopeptidase 2##NM_016627|AMZ2|51321|archaelysin family metallopeptidase 2##BC056271|AMZ2|51321|archaelysin family metallopeptidase 2##BC050709|AMZ2|51321|archaelysin family metallopeptidase 2##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G	0.97007	CTCF.p2:1:0.970
chr10	97123175	97123293	reg1000782.p1	16.611	+	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	-72452	-	AK126134 NM_207321	-169278	+	M21942 M21941 DQ891400 DQ894579 M17397 M17398 AK303813 Y00498 AK292753 AK293327 AK293328 AK298401 AK315823 BC020596 NM_000770 NM_001198853 NM_001198854 NM_001198855	-294071	-	AM393082 NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_006434	77681	-	TSC_hg19_v1_chr10_-_97321129 AB037717 BC152463 AK022468 AK300407 AK304753 AL117472 AM260536 NM_015385 NM_024991	197905	-	TSC_hg19_v1_chr10_-_97416472 U68758 U76542 BC106054 AK225455 AK225465 AK226032 AK295487 X94453 AK299557 AK312271 BC117240 BC117242 BC143930	293203	-	AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1##AK126134|C10orf129|142827|chromosome 10 open reading frame 129##NM_207321|C10orf129|142827|chromosome 10 open reading frame 129##M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AM393082|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1##NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1##AB037717|SORBS1|10580|sorbin and SH3 domain containing 1##BC152463|SORBS1|10580|sorbin and SH3 domain containing 1##AK022468|SORBS1|10580|sorbin and SH3 domain containing 1##AK300407|SORBS1|10580|sorbin and SH3 domain containing 1##AK304753|SORBS1|10580|sorbin and SH3 domain containing 1##AL117472|SORBS1|10580|sorbin and SH3 domain containing 1##AM260536|SORBS1|10580|sorbin and SH3 domain containing 1##NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1##NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1##U68758|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##U76542|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC106054|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK225455|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK225465|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK226032|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK295487|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##X94453|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK299557|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK312271|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC117240|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC117242|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC143930|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1	0.999818	CTCF.p2:21:1.000
chr15	85839919	85840060	reg1001177.p1	16.610	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-173671	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-314663	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-314752	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	83902	+	AF127481 NM_144767	380278	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	498108	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	0.987466	CTCF.p2:-15:0.987
chr16	48198869	48199024	reg1000831.p1	16.610	+	AY196326 AY040220 NM_033226	-18326	-	TSC_hg19_v1_chr16_+_47495241 X84908 CR936710 BC033657 AK309226	-703707	+	TSC_hg19_v1_chr16_+_47495206 NM_000293 NM_001031835 AK298588	-703758	+	AY040219 NM_033151	67235	-	AF367202 AF411579 NM_032583 NM_145186	70141	-	TSC_hg19_v1_chr16_+_48278210 AJ548761 NM_031490	79248	+	AY196326|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040220|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##NM_033226|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##X84908|PHKB|5257|phosphorylase kinase, beta##CR936710|PHKB|5257|phosphorylase kinase, beta##BC033657|PHKB|5257|phosphorylase kinase, beta##AK309226|PHKB|5257|phosphorylase kinase, beta##NM_000293|PHKB|5257|phosphorylase kinase, beta##NM_001031835|PHKB|5257|phosphorylase kinase, beta##AY040219|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_033151|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF367202|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF411579|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_032583|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_145186|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AJ548761|LONP2|83752|lon peptidase 2, peroxisomal##NM_031490|LONP2|83752|lon peptidase 2, peroxisomal	1.155781	CTCF.p2:19:1.000
chr2	11618174	11618312	reg1001569.p1	16.610	+	TSC_hg19_v1_chr2_-_11606278 AK223407 AY083996 NM_198256	-11957	-	BC107740 TSC_hg19_v1_chr2_-_11606272 BC008348 BC062610 AK290413 AK293504	-11999	-	TSC_hg19_v1_chr2_-_11484762 AB014519 NM_004850	-133498	-	AF245388 NM_014668	55998	+	AF245390 NM_148903 TSC_hg19_v1_chr2_+_11680117	61860	+	TSC_hg19_v1_chr2_+_11682798 BC071853	64558	+	AK223407|E2F6|1876|E2F transcription factor 6##AY083996|E2F6|1876|E2F transcription factor 6##NM_198256|E2F6|1876|E2F transcription factor 6##BC107740|E2F6|1876|E2F transcription factor 6##BC008348|E2F6|1876|E2F transcription factor 6##BC062610|E2F6|1876|E2F transcription factor 6##AK290413|E2F6|1876|E2F transcription factor 6##AK293504|E2F6|1876|E2F transcription factor 6##AB014519|ROCK2|9475|Rho-associated, coiled-coil containing protein kinase 2##NM_004850|ROCK2|9475|Rho-associated, coiled-coil containing protein kinase 2##AF245388|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_014668|GREB1|9687|growth regulation by estrogen in breast cancer 1##AF245390|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_148903|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1	1.200747	CTCF.p2:-6:0.996	CTCF.p2:-57:0.205
chr7	2710683	2710816	reg1001229.p1	16.610	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-39046	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	-39146	+	AK092404 AX747526 TSC_hg19_v1_chr7_+_2598712 BC061518 AL136792 AK293372	-112002	+	AK289723 AB075830 BC146753 NM_133463	8409	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	173059	-	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	372713	-	BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##AK092404|IQCE|23288|IQ motif containing E##BC061518|IQCE|23288|IQ motif containing E##AL136792|IQCE|23288|IQ motif containing E##AK293372|IQCE|23288|IQ motif containing E##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11	0.850975	CTCF.p2:-20:0.851
chr1	181159119	181159254	reg1001490.p1	16.609	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-101321	+	NM_016545	-101549	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-156036	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	293514	+	BC137223 BC137224 AK128654 NM_001009992	871611	-	TSC_hg19_v1_chr1_-_182354649 AK301600	1195496	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.989076	CTCF.p2:4:0.989
chr7	22766122	22766242	reg1000917.p4	16.604	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	-226335	-	AL833195 NM_012294	-369661	-	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-780700	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	641	+	TSC_hg19_v1_chr7_+_22767104 X04403	936	+	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	96261	-	BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	0.0	
chr11	64614714	64614832	reg1000764.p1	16.602	+	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	-2684	-	AJ297488 AJ297489 NM_130803 NM_130804	-36008	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	-36579	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	31209	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	31381	-	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	32388	-	AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I##AY007161|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1	0.545076	CTCF.p2:-11:0.535
chr5	317370	317489	reg1001222.p1	16.602	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-13139	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-45624	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-45661	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	125801	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	125921	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	155683	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.762975	CTCF.p2:-9:0.763
chr6	130643957	130644080	reg1001501.p1	16.602	+	AK091882 AX747235 NM_001017373	-99920	-	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	-107563	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	-304293	+	AB052099 NM_052913	114243	+	BC113027 NM_001195597 AK091900 AX747243 BC101422 BC101423 BC101424 BC101425 BC113026 TSC_hg19_v1_chr6_+_131148577	504544	+	TSC_hg19_v1_chr6_-_131291480 AK307764 NM_001199389	647533	-	AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A##BC113027|LOC100507203|100507203|uncharacterized LOC100507203##NM_001195597|LOC100507203|100507203|uncharacterized LOC100507203##AK091900|LOC100507203|100507203|uncharacterized LOC100507203##BC101422|LOC100507203|100507203|uncharacterized LOC100507203##BC101423|LOC100507203|100507203|uncharacterized LOC100507203##BC101424|LOC100507203|100507203|uncharacterized LOC100507203##BC101425|LOC100507203|100507203|uncharacterized LOC100507203##BC113026|LOC100507203|100507203|uncharacterized LOC100507203##AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	0.997864	CTCF.p2:-5:0.998
chrX	100023844	100023955	reg1000772.p1	16.599	+	TSC_hg19_v1_chrX_-_99987103 BX537410 AK292588 AK094110 NM_001129896	-36796	-	AK313086 BC014913 TSC_hg19_v1_chrX_-_99986519 NM_001174068 NM_080737	-37388	-	BC020733 TSC_hg19_v1_chrX_+_99899388	-124504	+	NM_001325 TSC_hg19_v1_chrX_+_100075379	51465	+	EU616679 M85085 TSC_hg19_v1_chrX_+_100075384 BC017712 AK095684 AK300600 DQ891532 DQ894721 AB528418 BT009778 BC033135	51496	+	AJ438989 DQ424904 BC075014 BC075015 AF166326 AF166327 AF166328 AK313678 AK292201 AF127763 NM_007052 NM_013955 TSC_hg19_v1_chrX_-_100129349	105339	-	BX537410|SYTL4|94121|synaptotagmin-like 4##AK292588|SYTL4|94121|synaptotagmin-like 4##NM_001129896|SYTL4|94121|synaptotagmin-like 4##AK313086|SYTL4|94121|synaptotagmin-like 4##BC014913|SYTL4|94121|synaptotagmin-like 4##NM_001174068|SYTL4|94121|synaptotagmin-like 4##NM_080737|SYTL4|94121|synaptotagmin-like 4##BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2##NM_001325|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##EU616679|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##M85085|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##BC017712|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##AK095684|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##AK300600|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##DQ891532|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##DQ894721|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##BT009778|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##BC033135|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##AJ438989|NOX1|27035|NADPH oxidase 1##DQ424904|NOX1|27035|NADPH oxidase 1##BC075014|NOX1|27035|NADPH oxidase 1##BC075015|NOX1|27035|NADPH oxidase 1##AF166326|NOX1|27035|NADPH oxidase 1##AF166327|NOX1|27035|NADPH oxidase 1##AF166328|NOX1|27035|NADPH oxidase 1##AK313678|NOX1|27035|NADPH oxidase 1##AK292201|NOX1|27035|NADPH oxidase 1##AF127763|NOX1|27035|NADPH oxidase 1##NM_007052|NOX1|27035|NADPH oxidase 1##NM_013955|NOX1|27035|NADPH oxidase 1	0.873312	CTCF.p2:-24:0.548	CTCF.p2:41:0.326
chrX	11551368	11551537	reg1000946.p1	16.599	+	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	-239910	+	AF177663 NM_013423 AK297713	-267344	-	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	-421983	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	132368	-	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	224891	+	NM_001193270 AK300814	225265	+	AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase##AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	2.960078	CTCF.p2:-7:0.971	CTCF.p2:73:0.997	CTCF.p2:-88:0.992
chr20	44065618	44065755	reg1001258.p1	16.595	+	NM_001184728 NM_001184729 NM_001184730 NM_015937 AK302093 TSC_hg19_v1_chr20_+_44044780 BC136827 BC136828 AK225517 BC015022 AK296063 AK299013 AK301815 AK311492 AK311520 AK316358 AK075469 AK293294 BX537612 AK293686 AK296139 AK311100 AK311416 AK311522 AB057724 BC110892 AY358588 AF132940 AL121742	-20932	+	TSC_hg19_v1_chr20_+_44036940 AY113697 AB463592 AM393126 AM393396 AM393681 CU674552	-28663	+	NM_001048225 NM_001048226	-29058	+	AK290288 AK311966 TSC_hg19_v1_chr20_+_44098394 NM_006103 AK225528 X63187 AY212888 AF330259 AF330260 AF330262 BC039816 BC046106 EU831749 EU831825 CR456977	32720	+	AY372172 NM_006652	78577	-	BC101600 BC101604 AF411861 NM_080827	102444	-	NM_001184728|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##NM_001184729|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##NM_001184730|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##NM_015937|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK302093|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BC136827|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BC136828|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK225517|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BC015022|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK296063|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK299013|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK301815|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311492|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311520|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK316358|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK075469|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK293294|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BX537612|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK293686|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK296139|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311100|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311416|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311522|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AB057724|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BC110892|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AY358588|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AF132940|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AL121742|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AY113697|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AM393126|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AM393396|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AM393681|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048225|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048226|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AK290288|WFDC2|10406|WAP four-disulfide core domain 2##AK311966|WFDC2|10406|WAP four-disulfide core domain 2##NM_006103|WFDC2|10406|WAP four-disulfide core domain 2##AK225528|WFDC2|10406|WAP four-disulfide core domain 2##X63187|WFDC2|10406|WAP four-disulfide core domain 2##AY212888|WFDC2|10406|WAP four-disulfide core domain 2##AF330259|WFDC2|10406|WAP four-disulfide core domain 2##AF330260|WFDC2|10406|WAP four-disulfide core domain 2##AF330262|WFDC2|10406|WAP four-disulfide core domain 2##BC039816|WFDC2|10406|WAP four-disulfide core domain 2##BC046106|WFDC2|10406|WAP four-disulfide core domain 2##EU831749|WFDC2|10406|WAP four-disulfide core domain 2##EU831825|WFDC2|10406|WAP four-disulfide core domain 2##CR456977|WFDC2|10406|WAP four-disulfide core domain 2##AY372172|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3##NM_006652|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3##BC101600|WFDC6|140870|WAP four-disulfide core domain 6##BC101604|WFDC6|140870|WAP four-disulfide core domain 6##AF411861|WFDC6|140870|WAP four-disulfide core domain 6##NM_080827|WFDC6|140870|WAP four-disulfide core domain 6	0.036957	
chr11	73046618	73046730	reg1001036.p2	16.592	+	TSC_hg19_v1_chr11_-_73020422 AK300095	-26251	-	BC137228 NM_014786 AF378754	-27009	+	TSC_hg19_v1_chr11_+_73019337 AK074500	-27270	+	TSC_hg19_v1_chr11_+_73087471 AK027899 NM_152222 BC051810 BC017279	40763	+	TSC_hg19_v1_chr11_+_73087683 AF319553 NM_032871	41017	+	D87470 TSC_hg19_v1_chr11_-_73309158 AK292054 EF197985 BC052341 EF363480 NM_015159	262524	-	AK300095|LOC100287837|100287837|uncharacterized LOC100287837##BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK027899|RELT|84957|RELT tumor necrosis factor receptor##NM_152222|RELT|84957|RELT tumor necrosis factor receptor##BC051810|RELT|84957|RELT tumor necrosis factor receptor##BC017279|RELT|84957|RELT tumor necrosis factor receptor##AF319553|RELT|84957|RELT tumor necrosis factor receptor##NM_032871|RELT|84957|RELT tumor necrosis factor receptor##D87470|FAM168A|23201|family with sequence similarity 168, member A##AK292054|FAM168A|23201|family with sequence similarity 168, member A##EF197985|FAM168A|23201|family with sequence similarity 168, member A##BC052341|FAM168A|23201|family with sequence similarity 168, member A##EF363480|FAM168A|23201|family with sequence similarity 168, member A##NM_015159|FAM168A|23201|family with sequence similarity 168, member A	0.07947	
chr1	165883546	165883657	reg1000787.p2	16.588	+	AF236637 AK294537 TSC_hg19_v1_chr1_+_165797063 AB062451	-86515	+	TSC_hg19_v1_chr1_+_165796794 NM_012474 BC002906	-86830	+	AK124964 BC009228 TSC_hg19_v1_chr1_+_165738255 BC071770	-145380	+	TSC_hg19_v1_chr1_-_166135951 NM_001017961	252353	-	TSC_hg19_v1_chr1_-_166135982 AB593134	252384	-	TSC_hg19_v1_chr1_-_166136076 BC114214	252539	-	AF236637|UCK2|7371|uridine-cytidine kinase 2##AK294537|UCK2|7371|uridine-cytidine kinase 2##AB062451|UCK2|7371|uridine-cytidine kinase 2##NM_012474|UCK2|7371|uridine-cytidine kinase 2##BC002906|UCK2|7371|uridine-cytidine kinase 2##AK124964|LOC100147773|100147773|uncharacterized LOC100147773##BC009228|LOC100147773|100147773|uncharacterized LOC100147773##BC071770|LOC100147773|100147773|uncharacterized LOC100147773##NM_001017961|FAM78B|149297|family with sequence similarity 78, member B##BC114214|FAM78B|149297|family with sequence similarity 78, member B	0.265918	CTCF.p2:9:0.266
chr11	44958124	44958240	reg1001579.p1	16.587	+	TSC_hg19_v1_chr11_-_44956087 AF010315	-2075	-	NM_130783	-172207	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-370955	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	14235	-	AF275818 NM_020229	157381	+	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	349568	-	AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##NM_130783|TSPAN18|90139|tetraspanin 18##AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII	0.999806	CTCF.p2:1:1.000
chr15	52623751	52623890	reg1001406.p1	16.587	+	AF272390 BC144611 BC064841 TSC_hg19_v1_chr15_-_52587968 AK301079 AK304136 NM_018728	-35886	-	AF161352 TSC_hg19_v1_chr15_-_52529707	-94114	-	NM_016194	-140256	-	TSC_hg19_v1_chr15_-_52821078 AB290180 AK303660 AK307600 NM_000259 NM_001142495 U90942 Y07759	197436	-	AK123616 TSC_hg19_v1_chr15_-_52861045 AJ223091 CR457132 AK311751	237239	-	TSC_hg19_v1_chr15_-_52861228 AF084555 BC003418 NM_006628	237412	-	AF272390|MYO5C|55930|myosin VC##BC144611|MYO5C|55930|myosin VC##BC064841|MYO5C|55930|myosin VC##AK301079|MYO5C|55930|myosin VC##AK304136|MYO5C|55930|myosin VC##NM_018728|MYO5C|55930|myosin VC##AF161352|MYO5C|55930|myosin VC##NM_016194|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AB290180|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK303660|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK307600|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_000259|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_001142495|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##U90942|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##Y07759|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK123616|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AJ223091|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##CR457132|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK311751|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AF084555|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC003418|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##NM_006628|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa	0.325486	CTCF.p2:-23:0.325
chr18	33864771	33864895	reg1001370.p1	16.584	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-97357	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-154945	+	NM_001242875 NM_001242876 NM_001242877 NM_001242878 NM_001242879 NM_018255 TSC_hg19_v1_chr18_+_33709861 AF403223 AK293051 AK302062	-154978	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	12881	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	543930	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	544061	-	NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242875|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242876|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242877|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242878|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242879|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_018255|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AF403223|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK293051|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK302062|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.976962	CTCF.p2:14:0.977
chr1	181111724	181111863	reg1001202.p1	16.581	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-53928	+	NM_016545	-54156	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-108643	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	340907	+	BC137223 BC137224 AK128654 NM_001009992	919004	-	TSC_hg19_v1_chr1_-_182354649 AK301600	1242889	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.99791	CTCF.p2:6:0.998
chr13	22852571	22852718	reg1001895.p1	16.581	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-607496	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-674284	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-674335	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	902471	+	TSC_hg19_v1_chr13_-_23949652 AK125458	1097006	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	1155196	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.999013	CTCF.p2:7:0.999
chr17	262161	262275	reg1000988.p1	16.581	+	TSC_hg19_v1_chr17_+_260159 AK128660 NM_001013672 BC141806 BC057385 BC070116 CU687042	-2038	+	TSC_hg19_v1_chr17_-_202619 NM_001190411 NM_001190412 NM_001190413 NM_006987	-59594	-	TSC_hg19_v1_chr17_-_202589 AK000469 AK291950	-59638	-	CU675257 EU021218 EU434648 EU434649 EU434650 AF246287 AY444797 BC006116 TSC_hg19_v1_chr17_-_618080 BC040223 AF318335 AK290343 AK092532 AX747587 NM_001128159 NM_018289	355821	-	TSC_hg19_v1_chr17_+_635806 AF477201 BC026023 AK025935 AK292065 NM_024792 CU693104 AK125146	373568	+	TSC_hg19_v1_chr17_-_655412 AB463052 AF173856 BC036024 AK302722 BC032084 BC020062	393202	-	AK128660|C17orf97|400566|chromosome 17 open reading frame 97##NM_001013672|C17orf97|400566|chromosome 17 open reading frame 97##BC141806|C17orf97|400566|chromosome 17 open reading frame 97##BC057385|C17orf97|400566|chromosome 17 open reading frame 97##BC070116|C17orf97|400566|chromosome 17 open reading frame 97##NM_001190411|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190412|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190413|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_006987|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AK000469|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AK291950|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##EU021218|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434648|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434649|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434650|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF246287|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AY444797|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC006116|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC040223|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF318335|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK290343|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK092532|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_001128159|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_018289|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF477201|FAM57A|79850|family with sequence similarity 57, member A##BC026023|FAM57A|79850|family with sequence similarity 57, member A##AK025935|FAM57A|79850|family with sequence similarity 57, member A##AK292065|FAM57A|79850|family with sequence similarity 57, member A##NM_024792|FAM57A|79850|family with sequence similarity 57, member A##AK125146|FAM57A|79850|family with sequence similarity 57, member A##AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4##AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4	0.990936	CTCF.p2:-10:0.991
chr2	113507366	113507490	reg1001375.p1	16.581	+	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	-103908	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-165239	+	TSC_hg19_v1_chr2_+_113342023 AK024631 BC004498 NM_032309 AK312219	-165390	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	14794	-	NM_000575 BC035169	35544	-	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	86916	-	NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BC004498|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_032309|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK312219|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta	0.99932	CTCF.p2:-3:0.999
chr5	148761566	148761676	reg1000998.p1	16.579	+	AB590699 CR457192 BC113925 BC113946 AF152098 AF184969 AF218727 AY358931 AF110385 AF212311 NM_014443 TSC_hg19_v1_chr5_-_148758856	-2799	-	TSC_hg19_v1_chr5_+_148737613 AF451985 BC000014	-23998	+	NM_024028 TSC_hg19_v1_chr5_+_148737608 AK075414	-24031	+	TSC_hg19_v1_chr5_+_148786440 AK126481 CR933654 BX640700	24861	+	AF218004 TSC_hg19_v1_chr5_-_148930935 AK303794 BC021971 BC025371 BC007246	169303	-	TSC_hg19_v1_chr5_-_148930950 AK294942	169345	-	CR457192|IL17B|27190|interleukin 17B##BC113925|IL17B|27190|interleukin 17B##BC113946|IL17B|27190|interleukin 17B##AF152098|IL17B|27190|interleukin 17B##AF184969|IL17B|27190|interleukin 17B##AF218727|IL17B|27190|interleukin 17B##AY358931|IL17B|27190|interleukin 17B##AF110385|IL17B|27190|interleukin 17B##AF212311|IL17B|27190|interleukin 17B##NM_014443|IL17B|27190|interleukin 17B##AF451985|PCYOX1L|78991|prenylcysteine oxidase 1 like##BC000014|PCYOX1L|78991|prenylcysteine oxidase 1 like##NM_024028|PCYOX1L|78991|prenylcysteine oxidase 1 like##AK075414|PCYOX1L|78991|prenylcysteine oxidase 1 like##AK126481|MIR143HG|728264|MIR143 host gene (non-protein coding)##CR933654|MIR143HG|728264|MIR143 host gene (non-protein coding)##AF218004|CSNK1A1|1452|casein kinase 1, alpha 1##AK303794|CSNK1A1|1452|casein kinase 1, alpha 1##BC021971|CSNK1A1|1452|casein kinase 1, alpha 1##BC025371|CSNK1A1|1452|casein kinase 1, alpha 1##BC007246|CSNK1A1|1452|casein kinase 1, alpha 1##AK294942|CSNK1A1|1452|casein kinase 1, alpha 1	0.999522	CTCF.p2:1:1.000
chr9	130880016	130880141	reg1001106.p1	16.579	+	NM_052901 TSC_hg19_v1_chr9_+_130860820 BC103930 BC103931 BC103932 BC103933 AJ619989 AJ619992 NM_001006643	-19253	+	BC089448 TSC_hg19_v1_chr9_+_130860793 AK290705	-19297	+	NM_001006642 AJ619991	-25944	+	TSC_hg19_v1_chr9_-_130889968 BC009397	9895	-	BC009456 AB463194 AM392565 DQ891904 DQ895090 TSC_hg19_v1_chr9_-_130890006 AK223520	9921	-	AK024100 TSC_hg19_v1_chr9_-_130890009	9930	-	NM_052901|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103930|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103931|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103932|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103933|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619989|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619992|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006643|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC089448|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AK290705|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006642|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC009397|PTGES2|80142|prostaglandin E synthase 2##BC009456|PTGES2|80142|prostaglandin E synthase 2##AM392565|PTGES2|80142|prostaglandin E synthase 2##DQ891904|PTGES2|80142|prostaglandin E synthase 2##DQ895090|PTGES2|80142|prostaglandin E synthase 2##AK223520|PTGES2|80142|prostaglandin E synthase 2##AK024100|PTGES2|80142|prostaglandin E synthase 2	1.998846	CTCF.p2:-29:0.999	CTCF.p2:30:1.000
chr9	893900	894045	reg1001377.p1	16.577	+	AF130728 AY442914 AY442915 NM_021951 AK313594 AJ276801 AL162131 BC040847 EU446468 AB463577 CU691924	-52209	+	TSC_hg19_v1_chr9_+_706828 BC038116 NM_153186	-187142	+	AB205112 TSC_hg19_v1_chr9_+_686677	-207306	+	NM_021240 BC113584 BC117245	82993	+	AF193873 TSC_hg19_v1_chr9_+_977425	83433	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	156372	+	AF130728|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442914|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442915|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021951|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AK313594|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AJ276801|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AL162131|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BC040847|DMRT1|1761|doublesex and mab-3 related transcription factor 1##EU446468|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BC038116|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_153186|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_021240|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC113584|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC117245|DMRT3|58524|doublesex and mab-3 related transcription factor 3##AF193873|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2	0.64151	CTCF.p2:-18:0.642
chr19	1001751	1001888	reg1000936.p1	16.575	+	TSC_hg19_v1_chr19_+_1000312 AY507106 AY507107 NM_138690	-1454	+	TSC_hg19_v1_chr19_+_984344 NM_024100 BC000040 BC001648 CU674808	-17485	+	TSC_hg19_v1_chr19_+_926038 AY845638 BC060828 NM_005224	-75808	+	DQ893224 DQ896554 CU679197 TSC_hg19_v1_chr19_-_1021121 BC008957 DQ005958	19239	-	TSC_hg19_v1_chr19_-_1021123 AK095756 NM_001033026 NM_033420	19349	-	TSC_hg19_v1_chr19_+_1026273 NM_004368 NM_201277	24480	+	AY507106|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##AY507107|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_138690|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_024100|WDR18|57418|WD repeat domain 18##BC000040|WDR18|57418|WD repeat domain 18##BC001648|WDR18|57418|WD repeat domain 18##AY845638|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC060828|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_005224|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##DQ893224|C19orf6|91304|chromosome 19 open reading frame 6##DQ896554|C19orf6|91304|chromosome 19 open reading frame 6##BC008957|C19orf6|91304|chromosome 19 open reading frame 6##DQ005958|C19orf6|91304|chromosome 19 open reading frame 6##AK095756|C19orf6|91304|chromosome 19 open reading frame 6##NM_001033026|C19orf6|91304|chromosome 19 open reading frame 6##NM_033420|C19orf6|91304|chromosome 19 open reading frame 6##NM_004368|CNN2|1265|calponin 2##NM_201277|CNN2|1265|calponin 2	0.653545	CTCF.p2:17:0.654
chr19	45227261	45227402	reg1001420.p1	16.573	+	BC144608 NM_001039213	-24911	+	BC083499 NM_001127893 NM_020219	-52608	+	TSC_hg19_v1_chr19_+_45147209 AK300349 AK094177 BC015542	-80115	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	24650	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	53825	+	TSC_hg19_v1_chr19_+_45312359 BC014065 NM_001013257 NM_005581 X83425 BC036745 X80026 BC050450 AB463427 CU690688 HE572749	85025	+	BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##BC083499|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_001127893|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_020219|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##AK300349|PVR|5817|poliovirus receptor##AK094177|PVR|5817|poliovirus receptor##BC015542|PVR|5817|poliovirus receptor##NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)	0.742921	CTCF.p2:-17:0.743
chr4	103371052	103371184	reg1001491.p1	16.573	+	TSC_hg19_v1_chr4_-_103266640 AF193052 BC012125 NM_001135146	-104484	-	TSC_hg19_v1_chr4_-_103266398 NM_001135147	-104716	-	TSC_hg19_v1_chr4_-_103266365 AB040120 NM_022154 AK304274	-104792	-	TSC_hg19_v1_chr4_-_103422436 BC033876	51337	-	TSC_hg19_v1_chr4_+_103422515 BC051765 NM_001165412 NM_003998	51380	+	TSC_hg19_v1_chr4_+_103422554 M58603	51437	+	AF193052|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##BC012125|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_001135146|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_001135147|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##BC051765|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##NM_001165412|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##NM_003998|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##M58603|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1	0.985113	CTCF.p2:-10:0.985
chr10	11557755	11557881	reg1000940.p1	16.567	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-350326	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-350372	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-350393	+	NM_001080491	16455	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	95818	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	226580	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.945518	CTCF.p2:-14:0.946
chr10	126218820	126218950	reg1001694.p1	16.567	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-68464	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-80308	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-111367	-	D50930 TSC_hg19_v1_chr10_-_126432660	213759	-	TSC_hg19_v1_chr10_-_126432823 BC031654	213931	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	214026	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.975016	CTCF.p2:-8:0.975
chr19	36661720	36661860	reg1001509.p1	16.567	+	BC002757 NM_001864	-18020	-	TSC_hg19_v1_chr19_+_36631899 CU680106 BT009775	-29605	+	TSC_hg19_v1_chr19_+_36631021 BC000592 BC011903 BC064998 BC017308 AY007141 BC023643 BC021933	-30757	+	BC068453 NM_152477 AK308212	43771	-	NM_001099638 NM_001099639 NM_007145 TSC_hg19_v1_chr19_+_36705624	43784	+	AK094310 NM_001042474	44193	-	BC002757|COX7A1|1346|cytochrome c oxidase subunit VIIa polypeptide 1 (muscle)##NM_001864|COX7A1|1346|cytochrome c oxidase subunit VIIa polypeptide 1 (muscle)##BT009775|CAPNS1|826|calpain, small subunit 1##BC000592|CAPNS1|826|calpain, small subunit 1##BC011903|CAPNS1|826|calpain, small subunit 1##BC064998|CAPNS1|826|calpain, small subunit 1##BC017308|CAPNS1|826|calpain, small subunit 1##AY007141|CAPNS1|826|calpain, small subunit 1##BC023643|CAPNS1|826|calpain, small subunit 1##BC021933|CAPNS1|826|calpain, small subunit 1##BC068453|ZNF565|147929|zinc finger protein 565##NM_152477|ZNF565|147929|zinc finger protein 565##AK308212|ZNF565|147929|zinc finger protein 565##NM_001099638|ZNF146|7705|zinc finger protein 146##NM_001099639|ZNF146|7705|zinc finger protein 146##NM_007145|ZNF146|7705|zinc finger protein 146##AK094310|ZNF565|147929|zinc finger protein 565##NM_001042474|ZNF565|147929|zinc finger protein 565	0.998884	CTCF.p2:14:0.999
chr5	111887253	111887389	reg1001659.p1	16.563	+	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	-132448	-	TSC_hg19_v1_chr5_+_111496560 AB002437	-390752	+	AK298779 NM_001142474 NM_001142475	-574747	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	155890	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	186252	+	NM_001204193 NM_001204194 NM_001204196 NM_001204199 NM_003135 TSC_hg19_v1_chr5_+_112196975	309608	+	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli##NM_001204193|SRP19|6728|signal recognition particle 19kDa##NM_001204194|SRP19|6728|signal recognition particle 19kDa##NM_001204196|SRP19|6728|signal recognition particle 19kDa##NM_001204199|SRP19|6728|signal recognition particle 19kDa##NM_003135|SRP19|6728|signal recognition particle 19kDa	0.897997	CTCF.p2:-5:0.898
chr12	49284579	49284694	reg1000907.p1	16.559	+	AF498967 Y07923 AB464152 AB040147 AK292762 BC026356 NM_014470	-25036	-	AF026402 BC002366 TSC_hg19_v1_chr12_-_49245925 AK294877 AK312379 AK128428 AK292921 NM_004818	-38704	-	NM_000725 NM_001206915 TSC_hg19_v1_chr12_+_49212307	-72353	+	NM_033124 AK302082 AK093051 AX747886 AF382188 AK314623 BC039317	13286	+	NM_001143781	34027	-	DQ892057 DQ895251 AF238079 BC027973 AY358998 BC048292 AK301455 TSC_hg19_v1_chr12_-_49319304 NM_001143782 NM_016594	34634	-	AF498967|RND1|27289|Rho family GTPase 1##Y07923|RND1|27289|Rho family GTPase 1##AB040147|RND1|27289|Rho family GTPase 1##AK292762|RND1|27289|Rho family GTPase 1##BC026356|RND1|27289|Rho family GTPase 1##NM_014470|RND1|27289|Rho family GTPase 1##AF026402|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##BC002366|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK294877|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK312379|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK128428|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK292921|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##NM_004818|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_001206915|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_033124|CCDC65|85478|coiled-coil domain containing 65##AK302082|CCDC65|85478|coiled-coil domain containing 65##AK093051|CCDC65|85478|coiled-coil domain containing 65##AF382188|CCDC65|85478|coiled-coil domain containing 65##AK314623|CCDC65|85478|coiled-coil domain containing 65##BC039317|CCDC65|85478|coiled-coil domain containing 65##NM_001143781|FKBP11|51303|FK506 binding protein 11, 19 kDa##DQ892057|FKBP11|51303|FK506 binding protein 11, 19 kDa##DQ895251|FKBP11|51303|FK506 binding protein 11, 19 kDa##AF238079|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC027973|FKBP11|51303|FK506 binding protein 11, 19 kDa##AY358998|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC048292|FKBP11|51303|FK506 binding protein 11, 19 kDa##AK301455|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_001143782|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_016594|FKBP11|51303|FK506 binding protein 11, 19 kDa	0.999195	CTCF.p2:8:0.999
chr4	146155385	146155520	reg1001409.p1	16.557	+	AK302581 NM_001102653	-54640	-	BC118572 BC118653 NM_017493	-59559	-	TSC_hg19_v1_chr4_+_146031528 X74987	-123902	+	TSC_hg19_v1_chr4_+_146403004 U59423 NM_005900 BC001878	247430	+	U59912 NM_001003688 U54826 AK293055	248506	+	TSC_hg19_v1_chr4_+_146540536 AK126662 NM_172250	385094	+	AK302581|OTUD4|54726|OTU domain containing 4##NM_001102653|OTUD4|54726|OTU domain containing 4##BC118572|OTUD4|54726|OTU domain containing 4##BC118653|OTUD4|54726|OTU domain containing 4##NM_017493|OTUD4|54726|OTU domain containing 4##X74987|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##U59423|SMAD1|4086|SMAD family member 1##NM_005900|SMAD1|4086|SMAD family member 1##BC001878|SMAD1|4086|SMAD family member 1##U59912|SMAD1|4086|SMAD family member 1##NM_001003688|SMAD1|4086|SMAD family member 1##U54826|SMAD1|4086|SMAD family member 1##AK293055|SMAD1|4086|SMAD family member 1##AK126662|MMAA|166785|methylmalonic aciduria (cobalamin deficiency) cblA type##NM_172250|MMAA|166785|methylmalonic aciduria (cobalamin deficiency) cblA type	0.946656	CTCF.p2:-12:0.947
chr21	45567164	45567285	reg1000757.p4	16.555	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-13663	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-13719	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-39925	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	93542	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	93633	-	AF194032 NM_013369 NM_175867	114874	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.974794	CTCF.p2:-23:0.975
chr10	91553551	91553698	reg1001404.p1	16.553	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-54857	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-92249	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-148300	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	1063822	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	1064109	-	TSC_hg19_v1_chr10_+_92631241 BC006991	1077633	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.983217	CTCF.p2:-20:0.983
chr1	156647923	156648064	reg1001480.p1	16.550	+	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	-848	-	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	-36039	+	TSC_hg19_v1_chr1_+_156611723 AY358372 NM_021948 NM_198427	-36264	+	BT019827 CR450357 DQ892265 DQ896851 M68867 BC001109 AB593017 AK312007 TSC_hg19_v1_chr1_-_156675376 NM_001878 NM_001199723	27429	-	AY391837 AK022733 NM_030980	49675	-	TSC_hg19_v1_chr1_-_156698238 BC000575 AK095697	50234	-	BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##AY358372|BCAN|63827|brevican##NM_021948|BCAN|63827|brevican##NM_198427|BCAN|63827|brevican##BT019827|CRABP2|1382|cellular retinoic acid binding protein 2##CR450357|CRABP2|1382|cellular retinoic acid binding protein 2##DQ892265|CRABP2|1382|cellular retinoic acid binding protein 2##DQ896851|CRABP2|1382|cellular retinoic acid binding protein 2##M68867|CRABP2|1382|cellular retinoic acid binding protein 2##BC001109|CRABP2|1382|cellular retinoic acid binding protein 2##AB593017|CRABP2|1382|cellular retinoic acid binding protein 2##AK312007|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001878|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001199723|CRABP2|1382|cellular retinoic acid binding protein 2##AY391837|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK022733|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_030980|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##BC000575|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK095697|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2	0.728098	CTCF.p2:17:0.728
chr19	2648583	2648717	reg1001697.p1	16.547	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-172412	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-191690	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-191714	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	54045	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	54092	-	AK124445 TSC_hg19_v1_chr19_-_2717420	68699	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.907396	CTCF.p2:-13:0.885
chr8	8608349	8608471	reg1000950.p1	16.544	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	-48712	+	AK122582 NM_001080826	-369188	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-432522	-	TSC_hg19_v1_chr8_-_8751060 NM_004225	142528	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	251955	+	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	252095	+	AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1	0.997383	CTCF.p2:-6:0.997
chr7	135694340	135694479	reg1001438.p1	16.543	+	BC013989 TSC_hg19_v1_chr7_-_135662202 NM_001128619 NM_145808	-32207	-	TSC_hg19_v1_chr7_-_135662107 AF106075 AL834231 BC028093 AK309816 AK056225	-32319	-	AB489167 AM393216 AM393266 TSC_hg19_v1_chr7_-_135661945	-32513	-	AY034603 AY219704 NM_001006627 NM_001006630 AK290236 AL832585	858997	+	AK125233 AY034604 AY456125 AY456126 AY456127 NM_000739 NM_001006631 NM_001006632 AY219705 NM_001006626 AY219703 NM_001006629 AY034605 NM_001006628 TSC_hg19_v1_chr7_+_136554002	859508	+	TSC_hg19_v1_chr7_-_137028305 D90226	1333894	-	NM_001128619|LUZP6|767558|leucine zipper protein 6##NM_145808|MTPN|136319|myotrophin##AF106075|MTPN|136319|myotrophin##AL834231|MTPN|136319|myotrophin##BC028093|MTPN|136319|myotrophin##AK309816|MTPN|136319|myotrophin##AK056225|MTPN|136319|myotrophin##AM393216|MTPN|136319|myotrophin##AM393266|MTPN|136319|myotrophin##AY034603|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219704|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006627|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006630|CHRM2|1129|cholinergic receptor, muscarinic 2##AK290236|CHRM2|1129|cholinergic receptor, muscarinic 2##AL832585|CHRM2|1129|cholinergic receptor, muscarinic 2##AK125233|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034604|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456125|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456126|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456127|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_000739|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006631|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006632|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219705|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006626|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219703|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006629|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034605|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006628|CHRM2|1129|cholinergic receptor, muscarinic 2##D90226|PTN|5764|pleiotrophin	0.952104	CTCF.p2:12:0.952
chr8	62381454	62381575	reg1001176.p1	16.543	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	-180964	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-790112	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-790226	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	220832	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	245504	-	TSC_hg19_v1_chr8_-_62627152 BC015518 BC025236 AK298577	245624	-	NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase##BC015518|ASPH|444|aspartate beta-hydroxylase##BC025236|ASPH|444|aspartate beta-hydroxylase##AK298577|ASPH|444|aspartate beta-hydroxylase	0.268042	CTCF.p2:5:0.251
chr17	36600464	36600585	reg1001429.p1	16.541	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	-15819	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	-92661	+	AY584611 NM_001004334	-100832	-	TSC_hg19_v1_chr17_-_36729122 AK295027	128598	-	BC029278 TSC_hg19_v1_chr17_-_36760969	160414	-	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	161672	-	NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1	0.979748	CTCF.p2:2:0.980
chr22	45831686	45831810	reg1000851.p2	16.540	+	TSC_hg19_v1_chr22_+_45809599 BC003024 BC009904 AL442116	-22120	+	TSC_hg19_v1_chr22_+_45809579 AK098586 NM_015653 AK225722	-22179	+	TSC_hg19_v1_chr22_-_45809502 BC126208 AJ504806 NM_148674	-22264	-	TSC_hg19_v1_chr22_+_45898762 NM_001996 NM_006485 NM_006486 NM_006487 AK075566 AK075460 AK300806 AK316291 BC022497 AF217999 AF126110 U01244 X53741 X53742 X53743 AB528743 DQ894047	67028	+	NM_001167621 NM_013236 AK294348 TSC_hg19_v1_chr22_+_46067713	235947	+	TSC_hg19_v1_chr22_+_46067733 AF086923 AL050282	235981	+	BC003024|RIBC2|26150|RIB43A domain with coiled-coils 2##BC009904|RIBC2|26150|RIB43A domain with coiled-coils 2##AL442116|RIBC2|26150|RIB43A domain with coiled-coils 2##AK098586|RIBC2|26150|RIB43A domain with coiled-coils 2##NM_015653|RIBC2|26150|RIB43A domain with coiled-coils 2##AK225722|RIBC2|26150|RIB43A domain with coiled-coils 2##BC126208|SMC1B|27127|structural maintenance of chromosomes 1B##AJ504806|SMC1B|27127|structural maintenance of chromosomes 1B##NM_148674|SMC1B|27127|structural maintenance of chromosomes 1B##NM_001996|FBLN1|2192|fibulin 1##NM_006485|FBLN1|2192|fibulin 1##NM_006486|FBLN1|2192|fibulin 1##NM_006487|FBLN1|2192|fibulin 1##AK075566|FBLN1|2192|fibulin 1##AK075460|FBLN1|2192|fibulin 1##AK300806|FBLN1|2192|fibulin 1##AK316291|FBLN1|2192|fibulin 1##BC022497|FBLN1|2192|fibulin 1##AF217999|FBLN1|2192|fibulin 1##AF126110|FBLN1|2192|fibulin 1##U01244|FBLN1|2192|fibulin 1##X53741|FBLN1|2192|fibulin 1##X53742|FBLN1|2192|fibulin 1##X53743|FBLN1|2192|fibulin 1##DQ894047|FBLN1|2192|fibulin 1##NM_001167621|ATXN10|25814|ataxin 10##NM_013236|ATXN10|25814|ataxin 10##AK294348|ATXN10|25814|ataxin 10##AF086923|ATXN10|25814|ataxin 10##AL050282|ATXN10|25814|ataxin 10	0.997629	CTCF.p2:-6:0.998
chr6	43037841	43037980	reg1001647.p1	16.539	+	NM_201522 AK127894	-9672	+	AK094102 NM_201523 AK055293 BX640717	-10280	+	AK297433 AK056393 NM_138343 NM_201521 BC012357 BC080637 BC103727	-10530	+	TSC_hg19_v1_chr6_+_43044048 NM_002821 NM_152880 NM_152881 NM_152882 U33635 BC071557 BC002377 BC014626 AK292589 AF531868 AF531869 AF531870 AF531871 AF531872 U40271 AB209350 AK291016	6167	+	NM_003131 TSC_hg19_v1_chr6_+_43139027 BC052572 J03161	101143	+	TSC_hg19_v1_chr6_+_43139192 BC048211	101283	+	NM_201522|KLC4|89953|kinesin light chain 4##AK127894|KLC4|89953|kinesin light chain 4##AK094102|KLC4|89953|kinesin light chain 4##NM_201523|KLC4|89953|kinesin light chain 4##AK055293|KLC4|89953|kinesin light chain 4##BX640717|KLC4|89953|kinesin light chain 4##AK297433|KLC4|89953|kinesin light chain 4##AK056393|KLC4|89953|kinesin light chain 4##NM_138343|KLC4|89953|kinesin light chain 4##NM_201521|KLC4|89953|kinesin light chain 4##BC012357|KLC4|89953|kinesin light chain 4##BC080637|KLC4|89953|kinesin light chain 4##BC103727|KLC4|89953|kinesin light chain 4##NM_002821|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152880|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152881|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152882|PTK7|5754|PTK7 protein tyrosine kinase 7##U33635|PTK7|5754|PTK7 protein tyrosine kinase 7##BC071557|PTK7|5754|PTK7 protein tyrosine kinase 7##BC002377|PTK7|5754|PTK7 protein tyrosine kinase 7##BC014626|PTK7|5754|PTK7 protein tyrosine kinase 7##AK292589|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531868|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531869|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531870|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531871|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531872|PTK7|5754|PTK7 protein tyrosine kinase 7##U40271|PTK7|5754|PTK7 protein tyrosine kinase 7##AB209350|PTK7|5754|PTK7 protein tyrosine kinase 7##AK291016|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_003131|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC052572|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##J03161|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC048211|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)	0.115009	
chr2	177319773	177319900	reg1001326.p1	16.536	+	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-185597	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-266420	+	BC005124 NM_006898	-291032	+	BC013438 TSC_hg19_v1_chr2_-_177502718	182852	-	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	757638	+	AK311688 NM_001145412 NM_001145413	808735	-	NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##BC005124|HOXD3|3232|homeobox D3##NM_006898|HOXD3|3232|homeobox D3##BC013438|LOC375295|375295|uncharacterized LOC375295##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.998446	CTCF.p2:0:0.998
chr3	12933575	12933706	reg1000650.p1	16.533	+	BC011514 BC070209 X03342 D28385 AK311909 TSC_hg19_v1_chr3_-_12883042 NM_000994 NM_001007073	-50597	-	NM_001007074	-51692	-	GU727621 NM_001162499 NM_012298 BC136592 AB014567	-95434	+	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	7968	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	75468	-	TSC_hg19_v1_chr3_-_13057189 BC071805	123578	-	BC011514|RPL32|6161|ribosomal protein L32##BC070209|RPL32|6161|ribosomal protein L32##X03342|RPL32|6161|ribosomal protein L32##D28385|RPL32|6161|ribosomal protein L32##AK311909|RPL32|6161|ribosomal protein L32##NM_000994|RPL32|6161|ribosomal protein L32##NM_001007073|RPL32|6161|ribosomal protein L32##NM_001007074|RPL32|6161|ribosomal protein L32##GU727621|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_001162499|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_012298|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##BC136592|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##AB014567|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1##AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1	0.0	
chr11	60955124	60955255	reg1001197.p1	16.532	+	BC141827 BC142702 AK097326 TSC_hg19_v1_chr11_-_60928910 NM_017966 AL834261 AK302384	-26259	-	NM_014207 AY541703 TSC_hg19_v1_chr11_+_60869960 AK292698 X04391 BC027901 DQ892077 DQ895270	-85210	+	NM_006725 TSC_hg19_v1_chr11_+_60739236 AK128419 AK312749 BC078669 BC033755 X60992 AK292704 DQ786329 DQ786330 U66142 U66145 U66146	-215964	+	NM_001079807 AK301286 AK301293 AK301305 AK312941 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	15819	+	AK301305 AK312941 NM_001079808 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	34656	+	NM_014224 BC146999 BC171889 BC171897 BC029055	53466	+	BC141827|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##BC142702|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK097326|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_017966|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AL834261|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK302384|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_014207|CD5|921|CD5 molecule##AY541703|CD5|921|CD5 molecule##AK292698|CD5|921|CD5 molecule##X04391|CD5|921|CD5 molecule##BC027901|CD5|921|CD5 molecule##DQ892077|CD5|921|CD5 molecule##DQ895270|CD5|921|CD5 molecule##NM_006725|CD6|923|CD6 molecule##AK128419|CD6|923|CD6 molecule##AK312749|CD6|923|CD6 molecule##BC078669|CD6|923|CD6 molecule##BC033755|CD6|923|CD6 molecule##X60992|CD6|923|CD6 molecule##AK292704|CD6|923|CD6 molecule##DQ786329|CD6|923|CD6 molecule##DQ786330|CD6|923|CD6 molecule##U66142|CD6|923|CD6 molecule##U66145|CD6|923|CD6 molecule##U66146|CD6|923|CD6 molecule##NM_001079807|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301286|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301293|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##NM_001079808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##NM_014224|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##BC146999|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##BC171889|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##BC171897|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##BC029055|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	0.40944	CTCF.p2:12:0.409
chr6	76236355	76236490	reg1001633.p1	16.532	+	AK290232 BC136443 BC136444 AL832009 AK097021 BC110829 BX647178 NM_015687 TSC_hg19_v1_chr6_-_76203497	-33046	-	TSC_hg19_v1_chr6_+_75994737 EF565086	-241667	+	NM_001143958 NM_018247 TSC_hg19_v1_chr6_-_75994700	-241752	-	AK126921 TSC_hg19_v1_chr6_+_76311581	74983	+	TSC_hg19_v1_chr6_+_76311617 NM_001100409 NM_015571	75197	+	TSC_hg19_v1_chr6_+_76311642 AK096455	75214	+	AK290232|FILIP1|27145|filamin A interacting protein 1##BC136443|FILIP1|27145|filamin A interacting protein 1##BC136444|FILIP1|27145|filamin A interacting protein 1##AL832009|FILIP1|27145|filamin A interacting protein 1##AK097021|FILIP1|27145|filamin A interacting protein 1##BX647178|FILIP1|27145|filamin A interacting protein 1##NM_015687|FILIP1|27145|filamin A interacting protein 1##EF565086|LOC100506804|100506804|uncharacterized LOC100506804##NM_001143958|TMEM30A|55754|transmembrane protein 30A##NM_018247|TMEM30A|55754|transmembrane protein 30A##AK126921|SENP6|26054|SUMO1/sentrin specific peptidase 6##NM_001100409|SENP6|26054|SUMO1/sentrin specific peptidase 6##NM_015571|SENP6|26054|SUMO1/sentrin specific peptidase 6##AK096455|SENP6|26054|SUMO1/sentrin specific peptidase 6	0.535752	CTCF.p2:10:0.536
chr9	117501257	117501388	reg1001574.p1	16.526	+	NM_001199233	-56954	-	TSC_hg19_v1_chr9_+_117373735 NM_153045 AK289383 BC107133 BC107134 BX649023	-127553	+	TSC_hg19_v1_chr9_+_117350103 CU678965 CR456971 CR542237	-151215	+	AY434464 NM_001204344	53487	-	AB590753 AK291642 BC074940 BC074941 BC069435 AK313721 BC104462 BC104463 NM_005118 AF520785	67029	-	AK313619 NM_001244 NM_001252290	191552	-	NM_001199233|LOC100505478|100505478|uncharacterized LOC100505478##NM_153045|C9orf91|203197|chromosome 9 open reading frame 91##AK289383|C9orf91|203197|chromosome 9 open reading frame 91##BC107133|C9orf91|203197|chromosome 9 open reading frame 91##BC107134|C9orf91|203197|chromosome 9 open reading frame 91##BX649023|C9orf91|203197|chromosome 9 open reading frame 91##CR456971|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##CR542237|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##AY434464|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001204344|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK291642|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074940|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074941|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC069435|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313721|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104462|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104463|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_005118|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AF520785|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8	0.990396	CTCF.p2:-10:0.990
chr3	40622134	40622257	reg1001399.p1	16.523	+	TSC_hg19_v1_chr3_+_40566471 BC101619 BC113415 CR749268	-55695	+	TSC_hg19_v1_chr3_+_40566380 AK127181 NM_001098414 NM_198484 AX721066 AK074366	-55793	+	AK131232 AX721156 NM_175888 AK093599 AX748220 TSC_hg19_v1_chr3_+_40547598	-74611	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	618754	+	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	618829	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	1381364	-	BC101619|ZNF621|285268|zinc finger protein 621##BC113415|ZNF621|285268|zinc finger protein 621##CR749268|ZNF621|285268|zinc finger protein 621##AK127181|ZNF621|285268|zinc finger protein 621##NM_001098414|ZNF621|285268|zinc finger protein 621##NM_198484|ZNF621|285268|zinc finger protein 621##AK074366|ZNF621|285268|zinc finger protein 621##AK131232|ZNF620|253639|zinc finger protein 620##NM_175888|ZNF620|253639|zinc finger protein 620##AK093599|ZNF620|253639|zinc finger protein 620##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)	0.990957	CTCF.p2:-2:0.991
chr1	205561081	205561221	reg1000841.p1	16.522	+	BC036549 AK091896 AX747240 TSC_hg19_v1_chr1_+_205538184 AK304120 AK090831 AX746641 AK295148	-22938	+	AK293816 NM_181644 TSC_hg19_v1_chr1_+_205538141	-23024	+	AY353237 AY353240 TSC_hg19_v1_chr1_+_205473802 AY353238 BC011526 AY353239	-87329	+	BC063676 M85164 M85165 TSC_hg19_v1_chr1_-_205601025 BC040145	39755	-	NM_001973 NM_021795	40848	-	BC050416 AY033593 TSC_hg19_v1_chr1_-_205649588	88417	-	BC036549|MFSD4|148808|major facilitator superfamily domain containing 4##AK091896|MFSD4|148808|major facilitator superfamily domain containing 4##AK304120|MFSD4|148808|major facilitator superfamily domain containing 4##AK090831|MFSD4|148808|major facilitator superfamily domain containing 4##AK295148|MFSD4|148808|major facilitator superfamily domain containing 4##AK293816|MFSD4|148808|major facilitator superfamily domain containing 4##NM_181644|MFSD4|148808|major facilitator superfamily domain containing 4##AY353237|CDK18|5129|cyclin-dependent kinase 18##AY353240|CDK18|5129|cyclin-dependent kinase 18##AY353238|CDK18|5129|cyclin-dependent kinase 18##BC011526|CDK18|5129|cyclin-dependent kinase 18##AY353239|CDK18|5129|cyclin-dependent kinase 18##BC063676|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85164|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85165|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC040145|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##NM_001973|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##NM_021795|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC050416|SLC45A3|85414|solute carrier family 45, member 3##AY033593|SLC45A3|85414|solute carrier family 45, member 3	0.080224	
chr10	118556570	118556692	reg1001572.p1	16.519	+	AB385329 TSC_hg19_v1_chr10_-_118502078 AB007877 NM_025015	-54553	-	AK097587 BC021737 NM_144661	-127157	-	TSC_hg19_v1_chr10_+_118380464 AK291492 AK307745 AK308508 AK308511 AK308521 NM_005396	-176172	+	BX647301 NM_001242699	52391	+	BC022348 TSC_hg19_v1_chr10_-_118680989 AL157479	124361	-	AB046818 AB384620 CU689320 EF055487 TSC_hg19_v1_chr10_-_118764698 BC032303 CR749417 BX537593 BX648065	208001	-	AB007877|HSPA12A|259217|heat shock 70kDa protein 12A##NM_025015|HSPA12A|259217|heat shock 70kDa protein 12A##AK097587|C10orf82|143379|chromosome 10 open reading frame 82##BC021737|C10orf82|143379|chromosome 10 open reading frame 82##NM_144661|C10orf82|143379|chromosome 10 open reading frame 82##AK291492|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK307745|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308508|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308511|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308521|PNLIPRP2|5408|pancreatic lipase-related protein 2##NM_005396|PNLIPRP2|5408|pancreatic lipase-related protein 2##BX647301|ENO4|387712|enolase family member 4##NM_001242699|ENO4|387712|enolase family member 4##BC022348|KIAA1598|57698|KIAA1598##AL157479|KIAA1598|57698|KIAA1598##AB046818|KIAA1598|57698|KIAA1598##EF055487|KIAA1598|57698|KIAA1598##BC032303|KIAA1598|57698|KIAA1598##CR749417|KIAA1598|57698|KIAA1598##BX537593|KIAA1598|57698|KIAA1598##BX648065|KIAA1598|57698|KIAA1598	0.997515	CTCF.p2:-4:0.998
chr5	1140538	1140652	reg1000709.p1	16.518	+	CU675797 AF105365 TSC_hg19_v1_chr5_-_1112151 AK302856 BC098390 BC007760 BC018982 NM_006598	-28438	-	TSC_hg19_v1_chr5_+_1008916 BC012176 AF358137 AB062887 NM_033120	-131562	+	TSC_hg19_v1_chr5_-_997422 AK126199 NM_001242737	-143160	-	AK096054 AK290811 NM_001003841 BC146290 BC148801 AB527217 AY591756 AY596807	61142	+	AK055798 NM_182632 AK298257 BC056757	84895	+	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	154496	-	AF105365|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK302856|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC098390|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC007760|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC018982|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##NM_006598|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC012176|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF358137|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AB062887|NKD2|85409|naked cuticle homolog 2 (Drosophila)##NM_033120|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AK126199|LOC100506688|100506688|uncharacterized LOC100506688##NM_001242737|LOC100506688|100506688|uncharacterized LOC100506688##AK096054|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK290811|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##NM_001003841|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC146290|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC148801|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY591756|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY596807|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK055798|SLC6A18|348932|solute carrier family 6, member 18##NM_182632|SLC6A18|348932|solute carrier family 6, member 18##AK298257|SLC6A18|348932|solute carrier family 6, member 18##BC056757|SLC6A18|348932|solute carrier family 6, member 18##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase	2.250008	CTCF.p2:8:0.999	CTCF.p2:-12:0.756	CTCF.p2:31:0.494
chr6	139685607	139685756	reg1000700.p1	16.517	+	TSC_hg19_v1_chr6_-_139613136 BX647633 AL834248 AL831988 AK314725 BX647477 BC115383 BC115384 AB085905 NM_153235	-72521	-	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	-229425	+	TSC_hg19_v1_chr6_+_139349935 AK309402 AF116682 BC014953	-335763	+	NM_001168389 NM_001168388	9742	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	10080	-	NM_006079 TSC_hg19_v1_chr6_-_139695784	10103	-	BX647633|TXLNB|167838|taxilin beta##AL834248|TXLNB|167838|taxilin beta##AL831988|TXLNB|167838|taxilin beta##AK314725|TXLNB|167838|taxilin beta##BX647477|TXLNB|167838|taxilin beta##BC115383|TXLNB|167838|taxilin beta##BC115384|TXLNB|167838|taxilin beta##AB085905|TXLNB|167838|taxilin beta##NM_153235|TXLNB|167838|taxilin beta##BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)##AF116682|C6orf115|58527|chromosome 6 open reading frame 115##BC014953|C6orf115|58527|chromosome 6 open reading frame 115##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	0.992613	CTCF.p2:45:0.993
chr1	153467511	153467641	reg1000549.p1	16.513	+	BC034687 M86757 NM_002963	-34456	-	NM_001045479	-55074	-	AY189118 NM_176823	-78577	+	TSC_hg19_v1_chr1_-_153508468 AK312088 D28464	40889	-	TSC_hg19_v1_chr1_-_153508522 BC001431	40956	-	TSC_hg19_v1_chr1_-_153508622 BC009017 NM_014624	41080	-	BC034687|S100A7|6278|S100 calcium binding protein A7##M86757|S100A7|6278|S100 calcium binding protein A7##NM_002963|S100A7|6278|S100 calcium binding protein A7##NM_001045479|S100A7L2|645922|S100 calcium binding protein A7-like 2##AY189118|S100A7A|338324|S100 calcium binding protein A7A##NM_176823|S100A7A|338324|S100 calcium binding protein A7A##AK312088|S100A6|6277|S100 calcium binding protein A6##D28464|S100A6|6277|S100 calcium binding protein A6##BC001431|S100A6|6277|S100 calcium binding protein A6##BC009017|S100A6|6277|S100 calcium binding protein A6##NM_014624|S100A6|6277|S100 calcium binding protein A6	1.084025	CTCF.p2:-13:1.000
chr17	48860644	48860773	reg1001554.p1	16.510	+	AF147357 TSC_hg19_v1_chr17_+_48821111	-39598	+	TSC_hg19_v1_chr17_+_48796963 NM_006107 NM_016424 AK290540 AK225980 AK023672 BC047043 BC056409 BC002925 AK295983 DQ013876 AK001925	-63715	+	AK314010 CR627413 TSC_hg19_v1_chr17_-_48785180 BC012978 EU164539 NM_052855	-75565	-	NM_175575	51896	+	TSC_hg19_v1_chr17_-_48943716 BC070493 BC098415 NM_001243885 NM_005749	82988	-	AK313904 NM_001243877	84630	-	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_006107|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_016424|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK290540|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK225980|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK023672|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC047043|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC056409|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC002925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK295983|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##DQ013876|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK001925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK314010|ANKRD40|91369|ankyrin repeat domain 40##CR627413|ANKRD40|91369|ankyrin repeat domain 40##BC012978|ANKRD40|91369|ankyrin repeat domain 40##EU164539|ANKRD40|91369|ankyrin repeat domain 40##NM_052855|ANKRD40|91369|ankyrin repeat domain 40##NM_175575|WFIKKN2|124857|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2##BC070493|TOB1|10140|transducer of ERBB2, 1##BC098415|TOB1|10140|transducer of ERBB2, 1##NM_001243885|TOB1|10140|transducer of ERBB2, 1##NM_005749|TOB1|10140|transducer of ERBB2, 1##AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1	0.957636	CTCF.p2:-9:0.958
chr6	154598501	154598645	reg1001617.p1	16.507	+	EU360599 EU362990 NM_001145287	-190932	+	L29301 NM_000914 NM_001008503 NM_001008504 NM_001008505 NM_001145282 NM_001145283 NM_001145284 NM_001145285 NM_001145286 L25119 U12569 AB590577 AK309655 AK313901 AY225404 AY364230 AY036622 AY036623 AY309001 AY309005 AY309006 AY309007 AY309008 AY309009 BC074927 AY521028	-238013	+	DQ680044 NM_001145279 NM_001145280 EU340241 EU340242 EU340243 NM_001145281	-266941	+	BX647254 NM_001130699	52641	-	AK289917 AJ310566 NM_001130700 NM_015553 TSC_hg19_v1_chr6_-_154677938	79342	-	TSC_hg19_v1_chr6_-_154831690 BC060761	233098	-	EU360599|OPRM1|4988|opioid receptor, mu 1##EU362990|OPRM1|4988|opioid receptor, mu 1##NM_001145287|OPRM1|4988|opioid receptor, mu 1##L29301|OPRM1|4988|opioid receptor, mu 1##NM_000914|OPRM1|4988|opioid receptor, mu 1##NM_001008503|OPRM1|4988|opioid receptor, mu 1##NM_001008504|OPRM1|4988|opioid receptor, mu 1##NM_001008505|OPRM1|4988|opioid receptor, mu 1##NM_001145282|OPRM1|4988|opioid receptor, mu 1##NM_001145283|OPRM1|4988|opioid receptor, mu 1##NM_001145284|OPRM1|4988|opioid receptor, mu 1##NM_001145285|OPRM1|4988|opioid receptor, mu 1##NM_001145286|OPRM1|4988|opioid receptor, mu 1##L25119|OPRM1|4988|opioid receptor, mu 1##U12569|OPRM1|4988|opioid receptor, mu 1##AK313901|OPRM1|4988|opioid receptor, mu 1##AY225404|OPRM1|4988|opioid receptor, mu 1##AY364230|OPRM1|4988|opioid receptor, mu 1##AY036622|OPRM1|4988|opioid receptor, mu 1##AY036623|OPRM1|4988|opioid receptor, mu 1##AY309001|OPRM1|4988|opioid receptor, mu 1##AY309005|OPRM1|4988|opioid receptor, mu 1##AY309006|OPRM1|4988|opioid receptor, mu 1##AY309007|OPRM1|4988|opioid receptor, mu 1##AY309008|OPRM1|4988|opioid receptor, mu 1##AY309009|OPRM1|4988|opioid receptor, mu 1##BC074927|OPRM1|4988|opioid receptor, mu 1##AY521028|OPRM1|4988|opioid receptor, mu 1##DQ680044|OPRM1|4988|opioid receptor, mu 1##NM_001145279|OPRM1|4988|opioid receptor, mu 1##NM_001145280|OPRM1|4988|opioid receptor, mu 1##EU340241|OPRM1|4988|opioid receptor, mu 1##EU340242|OPRM1|4988|opioid receptor, mu 1##EU340243|OPRM1|4988|opioid receptor, mu 1##NM_001145281|OPRM1|4988|opioid receptor, mu 1##BX647254|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130699|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##AK289917|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##AJ310566|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130700|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_015553|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##BC060761|CNKSR3|154043|CNKSR family member 3	0.021747	
chr16	67917730	67917859	reg1001640.p1	16.506	+	TSC_hg19_v1_chr16_+_67907132 AK291049 AK302563	-10596	+	TSC_hg19_v1_chr16_+_67907026 BC043616 BC064567 L26339	-10768	+	TSC_hg19_v1_chr16_+_67906967 NM_014329 AK128582	-10849	+	AY358782 NM_198443 BC100863 BC100864 BC100865 BC100866	986	+	TSC_hg19_v1_chr16_+_67927174 AK309272 NM_006742 BC062616 AJ272212	9428	+	CU687738 BC063475 AK223172 X71877 BC039716 NM_001907	47971	-	AK291049|EDC4|23644|enhancer of mRNA decapping 4##AK302563|EDC4|23644|enhancer of mRNA decapping 4##BC043616|EDC4|23644|enhancer of mRNA decapping 4##BC064567|EDC4|23644|enhancer of mRNA decapping 4##L26339|EDC4|23644|enhancer of mRNA decapping 4##NM_014329|EDC4|23644|enhancer of mRNA decapping 4##AK128582|EDC4|23644|enhancer of mRNA decapping 4##AY358782|NRN1L|123904|neuritin 1-like##NM_198443|NRN1L|123904|neuritin 1-like##BC100863|NRN1L|123904|neuritin 1-like##BC100864|NRN1L|123904|neuritin 1-like##BC100865|NRN1L|123904|neuritin 1-like##BC100866|NRN1L|123904|neuritin 1-like##AK309272|PSKH1|5681|protein serine kinase H1##NM_006742|PSKH1|5681|protein serine kinase H1##BC062616|PSKH1|5681|protein serine kinase H1##AJ272212|PSKH1|5681|protein serine kinase H1##BC063475|CTRL|1506|chymotrypsin-like##AK223172|CTRL|1506|chymotrypsin-like##X71877|CTRL|1506|chymotrypsin-like##BC039716|CTRL|1506|chymotrypsin-like##NM_001907|CTRL|1506|chymotrypsin-like	0.999343	CTCF.p2:5:0.999
chr1	43539396	43539528	reg1001355.p1	16.505	+	TSC_hg19_v1_chr1_-_43424834 NM_006516	-114622	-	TSC_hg19_v1_chr1_-_43424540 AK292791 AK293306 AK296736 AK312403 AB208987	-114890	-	AB384810 BC118590 BC121804 TSC_hg19_v1_chr1_-_43424504 K03195	-115040	-	NM_001101376	74131	+	AB451256 AB451381 BT006920 CR456975 CU679257 TSC_hg19_v1_chr1_-_43637951 BC009175 U86602 AK307440	98409	-	TSC_hg19_v1_chr1_-_43637958 AK223455	98500	-	NM_006516|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##NM_001101376|FAM183A|440585|family with sequence similarity 183, member A##AB451256|EBNA1BP2|10969|EBNA1 binding protein 2##AB451381|EBNA1BP2|10969|EBNA1 binding protein 2##BT006920|EBNA1BP2|10969|EBNA1 binding protein 2##CR456975|EBNA1BP2|10969|EBNA1 binding protein 2##BC009175|EBNA1BP2|10969|EBNA1 binding protein 2##U86602|EBNA1BP2|10969|EBNA1 binding protein 2##AK307440|EBNA1BP2|10969|EBNA1 binding protein 2##AK223455|EBNA1BP2|10969|EBNA1 binding protein 2	0.992925	CTCF.p2:25:0.993
chr17	7726151	7726277	reg1001323.p1	16.503	+	NM_020877 AB385476 AB463017	-103169	+	AK314841 TSC_hg19_v1_chr17_+_7608520 BC042944 NM_001406 U57001 AK027329	-117735	+	AY766323 DQ431240 NM_001143992 NM_018081 AK001247 AK225273 AK225411 AK303246 BC002336	-134479	+	TSC_hg19_v1_chr17_+_7741696 BC067879	15459	+	AB002344 NM_001080424	17019	+	TSC_hg19_v1_chr17_+_7758383 AK000032 BC057812 NM_203411	32168	+	NM_020877|DNAH2|146754|dynein, axonemal, heavy chain 2##AK314841|EFNB3|1949|ephrin-B3##BC042944|EFNB3|1949|ephrin-B3##NM_001406|EFNB3|1949|ephrin-B3##U57001|EFNB3|1949|ephrin-B3##AK027329|EFNB3|1949|ephrin-B3##AY766323|WRAP53|55135|WD repeat containing, antisense to TP53##DQ431240|WRAP53|55135|WD repeat containing, antisense to TP53##NM_001143992|WRAP53|55135|WD repeat containing, antisense to TP53##NM_018081|WRAP53|55135|WD repeat containing, antisense to TP53##AK001247|WRAP53|55135|WD repeat containing, antisense to TP53##AK225273|WRAP53|55135|WD repeat containing, antisense to TP53##AK225411|WRAP53|55135|WD repeat containing, antisense to TP53##AK303246|WRAP53|55135|WD repeat containing, antisense to TP53##BC002336|WRAP53|55135|WD repeat containing, antisense to TP53##AB002344|KDM6B|23135|lysine (K)-specific demethylase 6B##NM_001080424|KDM6B|23135|lysine (K)-specific demethylase 6B##AK000032|TMEM88|92162|transmembrane protein 88##BC057812|TMEM88|92162|transmembrane protein 88##NM_203411|TMEM88|92162|transmembrane protein 88	0.999464	CTCF.p2:-6:0.999
chr3	46908362	46908488	reg1001477.p1	16.501	+	AF174483 CU679491 X07373 M24122 AK312044 BC009790 NM_000258	-3500	-	AJ544583 NM_182702 AB587436	-32841	-	BC133695 NM_199183	-122181	-	BC112221 BC112247 NM_000316 U17418 X68596	10824	+	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	15317	+	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	109820	-	AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AJ544583|PRSS42|339906|protease, serine, 42##NM_182702|PRSS42|339906|protease, serine, 42##BC133695|PRSS45|377047|protease, serine, 45##NM_199183|PRSS45|377047|protease, serine, 45##BC112221|PTH1R|5745|parathyroid hormone 1 receptor##BC112247|PTH1R|5745|parathyroid hormone 1 receptor##NM_000316|PTH1R|5745|parathyroid hormone 1 receptor##U17418|PTH1R|5745|parathyroid hormone 1 receptor##X68596|PTH1R|5745|parathyroid hormone 1 receptor##BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12	0.998307	CTCF.p2:-8:0.998
chr12	104752285	104752393	reg1000904.p1	16.497	+	TSC_hg19_v1_chr12_+_104697516 NM_001008394 AK098698 BC027612	-54811	+	AK128515 TSC_hg19_v1_chr12_+_104682642 AY344670 AY344671 AY344672 AY344680 AY344094 AY344096 AY344095 AY344678 AF077367 AY344679	-69727	+	D88687 TSC_hg19_v1_chr12_+_104681047 AK295067	-71253	+	TSC_hg19_v1_chr12_+_104850745 NM_001173982 NM_018413 AK313217	98355	+	AK290923 TSC_hg19_v1_chr12_+_104850752	98412	+	TSC_hg19_v1_chr12_+_104850778 BC013315	98432	+	NM_001008394|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK098698|EID3|493861|EP300 interacting inhibitor of differentiation 3##BC027612|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK128515|TXNRD1|7296|thioredoxin reductase 1##AY344670|TXNRD1|7296|thioredoxin reductase 1##AY344096|TXNRD1|7296|thioredoxin reductase 1##AY344095|TXNRD1|7296|thioredoxin reductase 1##AF077367|TXNRD1|7296|thioredoxin reductase 1##AY344679|TXNRD1|7296|thioredoxin reductase 1##D88687|TXNRD1|7296|thioredoxin reductase 1##AK295067|TXNRD1|7296|thioredoxin reductase 1##NM_001173982|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##NM_018413|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK313217|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK290923|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	0.5601	CTCF.p2:6:0.560
chr12	117557617	117557751	reg1001030.p2	16.497	+	DQ894644 TSC_hg19_v1_chr12_-_117537222 AF443207 BC015221 NM_001168325 NM_017899 AK000614	-20421	-	TSC_hg19_v1_chr12_+_117348781 BC037296 NM_012174 NM_153348 AK289621 AF176707 BC075823	-208898	+	NM_003806 U76376	-238453	-	AL136899 TSC_hg19_v1_chr12_-_117628277 BC091496 AF174601 AB020682 AK001699 AK314573 BC034045 BC042333 AK308141 NM_015002 NM_033624	70541	-	NM_001204213	185172	-	NM_001204214	189530	-	DQ894644|TESC|54997|tescalcin##AF443207|TESC|54997|tescalcin##BC015221|TESC|54997|tescalcin##NM_001168325|TESC|54997|tescalcin##NM_017899|TESC|54997|tescalcin##AK000614|TESC|54997|tescalcin##BC037296|FBXW8|26259|F-box and WD repeat domain containing 8##NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8##NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8##AK289621|FBXW8|26259|F-box and WD repeat domain containing 8##AF176707|FBXW8|26259|F-box and WD repeat domain containing 8##NM_003806|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##U76376|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##AL136899|FBXO21|23014|F-box protein 21##BC091496|FBXO21|23014|F-box protein 21##AF174601|FBXO21|23014|F-box protein 21##AB020682|FBXO21|23014|F-box protein 21##AK001699|FBXO21|23014|F-box protein 21##AK314573|FBXO21|23014|F-box protein 21##BC034045|FBXO21|23014|F-box protein 21##BC042333|FBXO21|23014|F-box protein 21##AK308141|FBXO21|23014|F-box protein 21##NM_015002|FBXO21|23014|F-box protein 21##NM_033624|FBXO21|23014|F-box protein 21##NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)	0.295068	CTCF.p2:31:0.295
chr5	73088677	73088805	reg1001389.p1	16.496	+	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	-166756	+	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	-227159	+	BC012917 TSC_hg19_v1_chr5_-_72861465 AF251051 NM_023039	-227282	-	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	20609	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	847722	-	AK096578 NM_003633	848507	-	AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##BC012917|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AF251051|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##NM_023039|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)	0.997739	CTCF.p2:16:0.998
chr17	30646568	30646711	reg1000964.p1	16.494	+	AJ313480 BC100975 BC100976 BC100978 NM_138328 BC100977	-53445	+	TSC_hg19_v1_chr17_+_30469588 BC092401 BC068463 AY094972 BC125104 BC125105 AL136929 BC029029 AK294407 AB527368 AM393207 BC146694 AJ517412	-177000	+	TSC_hg19_v1_chr17_+_30469544 BC110895	-177094	+	TSC_hg19_v1_chr17_-_30669193 AF052093 CU691078 BC054035 BC047325 BC026017 BC035715 AF305686 NM_022344	22568	-	TSC_hg19_v1_chr17_+_30677175 BC002372 NM_001032293 NM_001098507 NM_003457	30517	+	TSC_hg19_v1_chr17_+_30677178 AK298950 AK226172	30542	+	AJ313480|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC100975|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC100976|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC100978|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##NM_138328|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC100977|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC092401|RHOT1|55288|ras homolog gene family, member T1##BC068463|RHOT1|55288|ras homolog gene family, member T1##AY094972|RHOT1|55288|ras homolog gene family, member T1##BC125104|RHOT1|55288|ras homolog gene family, member T1##BC125105|RHOT1|55288|ras homolog gene family, member T1##AL136929|RHOT1|55288|ras homolog gene family, member T1##BC029029|RHOT1|55288|ras homolog gene family, member T1##AK294407|RHOT1|55288|ras homolog gene family, member T1##AM393207|RHOT1|55288|ras homolog gene family, member T1##BC146694|RHOT1|55288|ras homolog gene family, member T1##AJ517412|RHOT1|55288|ras homolog gene family, member T1##BC110895|RHOT1|55288|ras homolog gene family, member T1##AF052093|C17orf75|64149|chromosome 17 open reading frame 75##BC054035|C17orf75|64149|chromosome 17 open reading frame 75##BC047325|C17orf75|64149|chromosome 17 open reading frame 75##BC026017|C17orf75|64149|chromosome 17 open reading frame 75##BC035715|C17orf75|64149|chromosome 17 open reading frame 75##AF305686|C17orf75|64149|chromosome 17 open reading frame 75##NM_022344|C17orf75|64149|chromosome 17 open reading frame 75##BC002372|ZNF207|7756|zinc finger protein 207##NM_001032293|ZNF207|7756|zinc finger protein 207##NM_001098507|ZNF207|7756|zinc finger protein 207##NM_003457|ZNF207|7756|zinc finger protein 207##AK298950|ZNF207|7756|zinc finger protein 207##AK226172|ZNF207|7756|zinc finger protein 207	0.802856	CTCF.p2:1:0.741
chr3	187397516	187397650	reg1001422.p2	16.494	+	BC032625 AK312177 TSC_hg19_v1_chr3_-_187388181 NM_001048	-9431	-	BC013161 NM_022147 AJ251832 AY562238 DQ891046 DQ894225	-311385	+	BC106945 BC106946 TSC_hg19_v1_chr3_-_187009489 AK291686 AK129893 AK304334 AK300663 BX647237 AK291157 CR749615 BC039724 NM_001031849 NM_001879 NM_139125	-387944	-	BC068081 NM_001004312	22761	-	EU139066 NM_001134738	55098	-	S67779 NM_001130845	56682	-	BC032625|SST|6750|somatostatin##AK312177|SST|6750|somatostatin##NM_001048|SST|6750|somatostatin##BC013161|RTP4|64108|receptor (chemosensory) transporter protein 4##NM_022147|RTP4|64108|receptor (chemosensory) transporter protein 4##AJ251832|RTP4|64108|receptor (chemosensory) transporter protein 4##AY562238|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ891046|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ894225|RTP4|64108|receptor (chemosensory) transporter protein 4##BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC068081|RTP2|344892|receptor (chemosensory) transporter protein 2##NM_001004312|RTP2|344892|receptor (chemosensory) transporter protein 2##EU139066|BCL6|604|B-cell CLL/lymphoma 6##NM_001134738|BCL6|604|B-cell CLL/lymphoma 6##S67779|BCL6|604|B-cell CLL/lymphoma 6##NM_001130845|BCL6|604|B-cell CLL/lymphoma 6	0.832688	CTCF.p2:11:0.833
chr22	37853477	37853599	reg1001652.p1	16.492	+	TSC_hg19_v1_chr22_-_37823515 NM_052906	-30010	-	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	-174962	+	TSC_hg19_v1_chr22_+_37678548 AK304453 BC017780	-175001	+	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	28807	-	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	61769	-	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	102935	+	NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2##BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4##AK304453|CYTH4|27128|cytohesin 4##BC017780|CYTH4|27128|cytohesin 4##CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10##NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1	0.999616	CTCF.p2:9:1.000
chr11	118069133	118069265	reg1001513.p1	16.491	+	NM_004588 TSC_hg19_v1_chr11_-_118047340	-21857	-	AF007783 BT019487 DQ892426 DQ892634 DQ895640 U87555 AY358945 BC036793 AF049498 AK308834 AK313891 TSC_hg19_v1_chr11_-_118047330	-21962	-	AY149967 AK314531 NM_001142348 NM_174934	-45618	-	AK094399 NM_153206	14874	-	AK090409 AY138965 AY358362 AY093686 AK298722 AK300851 AK301099 AJ515553 NM_001098526	26559	-	TSC_hg19_v1_chr11_-_118123036 HQ258603 AY358626 NM_198275 AK095399 AK289390 AK296951 BC031223 AK304292 AK310966 BC113586 BC143897	53851	-	NM_004588|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AF007783|SCN2B|6327|sodium channel, voltage-gated, type II, beta##BT019487|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ892426|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ892634|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ895640|SCN2B|6327|sodium channel, voltage-gated, type II, beta##U87555|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AY358945|SCN2B|6327|sodium channel, voltage-gated, type II, beta##BC036793|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AF049498|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK308834|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK313891|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AY149967|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##AK314531|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_001142348|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_174934|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK090409|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AY138965|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AY358362|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AY093686|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK298722|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK300851|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK301099|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AJ515553|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##NM_001098526|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##HQ258603|MPZL3|196264|myelin protein zero-like 3##AY358626|MPZL3|196264|myelin protein zero-like 3##NM_198275|MPZL3|196264|myelin protein zero-like 3##AK095399|MPZL3|196264|myelin protein zero-like 3##AK289390|MPZL3|196264|myelin protein zero-like 3##AK296951|MPZL3|196264|myelin protein zero-like 3##BC031223|MPZL3|196264|myelin protein zero-like 3##AK304292|MPZL3|196264|myelin protein zero-like 3##AK310966|MPZL3|196264|myelin protein zero-like 3##BC113586|MPZL3|196264|myelin protein zero-like 3##BC143897|MPZL3|196264|myelin protein zero-like 3	0.99871	CTCF.p2:-17:0.999
chr9	131690310	131690449	reg1001794.p1	16.489	+	NM_001100877 BC051300 BC053853 CU691038	-5798	+	BC009373 TSC_hg19_v1_chr9_+_131683689	-6691	+	AK095000 NM_001100876 NM_174933	-7206	+	TSC_hg19_v1_chr9_-_131709833 AK300180 BC035556 AY358759 AK225402 AB029017 NM_014908	19518	-	TSC_hg19_v1_chr9_+_131709977 NM_015354	19601	+	TSC_hg19_v1_chr9_+_131709992 BX537774 D79991	19632	+	NM_001100877|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##BC051300|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##BC053853|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##BC009373|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##AK095000|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##NM_001100876|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##NM_174933|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##AK300180|DOLK|22845|dolichol kinase##BC035556|DOLK|22845|dolichol kinase##AY358759|DOLK|22845|dolichol kinase##AB029017|DOLK|22845|dolichol kinase##NM_014908|DOLK|22845|dolichol kinase##NM_015354|NUP188|23511|nucleoporin 188kDa##BX537774|NUP188|23511|nucleoporin 188kDa##D79991|NUP188|23511|nucleoporin 188kDa	0.963715	CTCF.p2:10:0.964
chr22	24585764	24585882	reg1001095.p1	16.488	+	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	-8379	+	TSC_hg19_v1_chr22_+_24577424 AK026431	-8396	+	TSC_hg19_v1_chr22_+_24551954 AL390166	-33866	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	55156	-	TSC_hg19_v1_chr22_+_24666804 NM_001145468 NM_015330 AK097129 AK301482 AB209022 AL832425 BC005093 BC136471	81017	+	TSC_hg19_v1_chr22_+_24819870 EU036694	234057	+	BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##AK026431|SUSD2|56241|sushi domain containing 2##AL390166|CABIN1|23523|calcineurin binding protein 1##CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5##NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##EU036694|ADORA2A|135|adenosine A2a receptor	0.0	
chr2	220019889	220020009	reg1001049.p1	16.486	+	BC136587 BC136588 NM_002181	-94712	-	AK127189 AK302678 AK302688 BC031585 NM_152389 NM_194302 BC047637	-113707	-	AF166331 NM_005209 BC006285 NM_057093 NM_057094	-161826	-	TSC_hg19_v1_chr2_-_220025558 BC012732 AK022672 AJ972687 BC030986 NM_024782	5590	-	DQ891019 DQ894199 CU688862 AK091919 BC030243 AK298256 AK298277 AK055730 NM_001144889 NM_001144890 NM_144712	14812	-	CR457401 CU674686 AK311656 TSC_hg19_v1_chr2_-_220041648 BC001393 AK314975 AK075274 BC012821 AY007160 NM_015680	21678	-	BC136587|IHH|3549|Indian hedgehog##BC136588|IHH|3549|Indian hedgehog##NM_002181|IHH|3549|Indian hedgehog##AK127189|CCDC108|255101|coiled-coil domain containing 108##AK302678|CCDC108|255101|coiled-coil domain containing 108##AK302688|CCDC108|255101|coiled-coil domain containing 108##BC031585|CCDC108|255101|coiled-coil domain containing 108##NM_152389|CCDC108|255101|coiled-coil domain containing 108##NM_194302|CCDC108|255101|coiled-coil domain containing 108##BC047637|CCDC108|255101|coiled-coil domain containing 108##AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2##BC012732|NHEJ1|79840|nonhomologous end-joining factor 1##AK022672|NHEJ1|79840|nonhomologous end-joining factor 1##AJ972687|NHEJ1|79840|nonhomologous end-joining factor 1##BC030986|NHEJ1|79840|nonhomologous end-joining factor 1##NM_024782|NHEJ1|79840|nonhomologous end-joining factor 1##DQ891019|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##DQ894199|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##BC030243|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298256|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298277|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK055730|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144889|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144890|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_144712|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##CR457401|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC001393|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK314975|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK075274|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC012821|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AY007160|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##NM_015680|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1	0.985581	CTCF.p2:11:0.986
chr17	47445888	47446006	reg1001358.p1	16.482	+	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	-6367	-	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	-137804	-	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-157870	+	BC095460 TSC_hg19_v1_chr17_-_47492215	46268	-	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	46301	-	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	126741	+	CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##BC095460|PHB|5245|prohibitin##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor	0.0	
chr16	2073227	2073357	reg1001664.p1	16.479	+	AB084276 TSC_hg19_v1_chr16_+_2069788	-3527	+	NM_001099456 AL365521	-3760	+	AK024487 TSC_hg19_v1_chr16_-_2059805	-13472	-	TSC_hg19_v1_chr16_+_2076902 NM_001130012 NM_004785 BC106001 BC014513 BC069014 Z50150 U82108 AF004900 AF035771	3614	+	NM_001252073 NM_001252075 NM_001252076 TSC_hg19_v1_chr16_+_2083294	9988	+	Y09687 TSC_hg19_v1_chr16_-_2097836 BC000391 BC003014 U81285 AB001575 AB528626 AK298247 NM_002528 U79718	24550	-	AB084276|NPW|283869|neuropeptide W##NM_001099456|NPW|283869|neuropeptide W##AL365521|NPW|283869|neuropeptide W##AK024487|ZNF598|90850|zinc finger protein 598##NM_001130012|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2##NM_004785|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2##BC106001|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2##BC014513|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2##BC069014|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2##Z50150|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2##U82108|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2##AF004900|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2##AF035771|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2##NM_001252073|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2##NM_001252075|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2##NM_001252076|SLC9A3R2|9351|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 2##Y09687|NTHL1|4913|nth endonuclease III-like 1 (E. coli)##BC000391|NTHL1|4913|nth endonuclease III-like 1 (E. coli)##BC003014|NTHL1|4913|nth endonuclease III-like 1 (E. coli)##U81285|NTHL1|4913|nth endonuclease III-like 1 (E. coli)##AB001575|NTHL1|4913|nth endonuclease III-like 1 (E. coli)##NM_002528|NTHL1|4913|nth endonuclease III-like 1 (E. coli)##U79718|NTHL1|4913|nth endonuclease III-like 1 (E. coli)	0.077091	
chr19	41140529	41140649	reg1000867.p2	16.478	+	AK304612 TSC_hg19_v1_chr19_+_41120049	-20531	+	TSC_hg19_v1_chr19_+_41119819 AF054501	-20741	+	TSC_hg19_v1_chr19_+_41119492 AK074499	-21100	+	BC016160 BC144583 TSC_hg19_v1_chr19_-_41196558 AK289398 NM_004756	55904	-	BC027473 TSC_hg19_v1_chr19_-_41220989	80394	-	TSC_hg19_v1_chr19_-_41220999 NM_001142555	80426	-	AK304612|LTBP4|8425|latent transforming growth factor beta binding protein 4##AF054501|LTBP4|8425|latent transforming growth factor beta binding protein 4##AK074499|LTBP4|8425|latent transforming growth factor beta binding protein 4##BC016160|NUMBL|9253|numb homolog (Drosophila)-like##BC144583|NUMBL|9253|numb homolog (Drosophila)-like##AK289398|NUMBL|9253|numb homolog (Drosophila)-like##NM_004756|NUMBL|9253|numb homolog (Drosophila)-like##BC027473|ADCK4|79934|aarF domain containing kinase 4##NM_001142555|ADCK4|79934|aarF domain containing kinase 4	1.606194	CTCF.p2:18:0.999	CTCF.p2:-26:0.607
chr8	142737242	142737357	reg1001283.p1	16.478	+	BC144560 AK125848 AK131461 NM_207414	-219982	-	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	-305238	+	TSC_hg19_v1_chr8_+_142402120 AK311257	-335165	+	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	747238	-	AB005297 NM_001702	808077	+	AF193421 D87468 BC075802 BC012321 NM_015193 TSC_hg19_v1_chr8_-_143695839	958527	-	BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1##AF193421|ARC|23237|activity-regulated cytoskeleton-associated protein##D87468|ARC|23237|activity-regulated cytoskeleton-associated protein##BC075802|ARC|23237|activity-regulated cytoskeleton-associated protein##BC012321|ARC|23237|activity-regulated cytoskeleton-associated protein##NM_015193|ARC|23237|activity-regulated cytoskeleton-associated protein	0.134698	
chr13	51860643	51860783	reg1001783.p1	16.477	+	TSC_hg19_v1_chr13_+_51796507 BC034497 NM_001242312 NM_145019 AK055269 AK096364 BC051771 AB527542 CU690842	-64197	+	BC001397 BC005088 BC007332 BC010174 TSC_hg19_v1_chr13_+_51484193	-376556	+	TSC_hg19_v1_chr13_+_51483926 AK021774 AK223340 BC036744	-376759	+	AX772926 NM_001101320 AM402969	54482	+	AF097645 BC039829 BC018725 BC013358 BC032386 TSC_hg19_v1_chr13_-_52027173 AK296801 AK304218	166440	-	NM_001039937 NM_001039938 NM_012141 AL833524 TSC_hg19_v1_chr13_-_52027409	166629	-	BC034497|FAM124A|220108|family with sequence similarity 124A##NM_001242312|FAM124A|220108|family with sequence similarity 124A##NM_145019|FAM124A|220108|family with sequence similarity 124A##AK055269|FAM124A|220108|family with sequence similarity 124A##AK096364|FAM124A|220108|family with sequence similarity 124A##BC051771|FAM124A|220108|family with sequence similarity 124A##BC001397|RNASEH2B|79621|ribonuclease H2, subunit B##BC005088|RNASEH2B|79621|ribonuclease H2, subunit B##BC007332|RNASEH2B|79621|ribonuclease H2, subunit B##BC010174|RNASEH2B|79621|ribonuclease H2, subunit B##AK021774|RNASEH2B|79621|ribonuclease H2, subunit B##AK223340|RNASEH2B|79621|ribonuclease H2, subunit B##BC036744|RNASEH2B|79621|ribonuclease H2, subunit B##AX772926|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##NM_001101320|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AM402969|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AF097645|INTS6|26512|integrator complex subunit 6##BC039829|INTS6|26512|integrator complex subunit 6##BC018725|INTS6|26512|integrator complex subunit 6##BC013358|INTS6|26512|integrator complex subunit 6##BC032386|INTS6|26512|integrator complex subunit 6##AK296801|INTS6|26512|integrator complex subunit 6##AK304218|INTS6|26512|integrator complex subunit 6##NM_001039937|INTS6|26512|integrator complex subunit 6##NM_001039938|INTS6|26512|integrator complex subunit 6##NM_012141|INTS6|26512|integrator complex subunit 6##AL833524|INTS6|26512|integrator complex subunit 6	1.030789	CTCF.p2:9:1.000
chr15	57632985	57633105	reg1001448.p1	16.477	+	TSC_hg19_v1_chr15_+_57511630 AK294991 AK304007 AK311359 AK308101 NM_207040 BX537967 AM393573	-121378	+	TSC_hg19_v1_chr15_+_57210977 M83233	-422045	+	TSC_hg19_v1_chr15_+_57210901 BC050556 BC051769 M80627	-422143	+	AK056673 AK307410 NM_001252335 NM_032866 TSC_hg19_v1_chr15_+_57668732 AY274808 BC030995 AY610514	35672	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	251120	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	365841	+	AK294991|TCF12|6938|transcription factor 12##AK304007|TCF12|6938|transcription factor 12##AK311359|TCF12|6938|transcription factor 12##AK308101|TCF12|6938|transcription factor 12##NM_207040|TCF12|6938|transcription factor 12##BX537967|TCF12|6938|transcription factor 12##AM393573|TCF12|6938|transcription factor 12##M83233|TCF12|6938|transcription factor 12##BC050556|TCF12|6938|transcription factor 12##BC051769|TCF12|6938|transcription factor 12##M80627|TCF12|6938|transcription factor 12##AK056673|CGNL1|84952|cingulin-like 1##AK307410|CGNL1|84952|cingulin-like 1##NM_001252335|CGNL1|84952|cingulin-like 1##NM_032866|CGNL1|84952|cingulin-like 1##AY274808|CGNL1|84952|cingulin-like 1##BC030995|CGNL1|84952|cingulin-like 1##AY610514|CGNL1|84952|cingulin-like 1##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M	0.902871	CTCF.p2:0:0.882
chr17	53679255	53679369	reg1001287.p1	16.475	+	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	-180057	-	TSC_hg19_v1_chr17_+_53344967 AK295726 AK074289	-334326	+	AK290043 TSC_hg19_v1_chr17_+_53343204	-336125	+	BC010128 AK001832 NM_018286	120837	-	AK095175 NM_001099640	130150	-	NM_021213 TSC_hg19_v1_chr17_+_53828339 AF087857 AF151638	149063	+	CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##AK295726|HLF|3131|hepatic leukemia factor##AK074289|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100##NM_021213|PCTP|58488|phosphatidylcholine transfer protein##AF087857|PCTP|58488|phosphatidylcholine transfer protein##AF151638|PCTP|58488|phosphatidylcholine transfer protein	0.0	
chr11	124832029	124832162	reg1001321.p1	16.469	+	TSC_hg19_v1_chr11_+_124824093 BC018540	-7989	+	TSC_hg19_v1_chr11_+_124824034 AK023277 NM_025004	-8053	+	TSC_hg19_v1_chr11_-_124806317 NM_152722	-25785	-	TSC_hg19_v1_chr11_+_124933012 AK074207 NM_001145290 NM_198277	100924	+	TSC_hg19_v1_chr11_+_124933200 AK290314 AK074100 BC051314 CU690800	101135	+	NM_001080546	141109	-	BC018540|CCDC15|80071|coiled-coil domain containing 15##AK023277|CCDC15|80071|coiled-coil domain containing 15##NM_025004|CCDC15|80071|coiled-coil domain containing 15##NM_152722|HEPACAM|220296|hepatic and glial cell adhesion molecule##AK074207|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##NM_001145290|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##NM_198277|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##AK290314|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##AK074100|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##BC051314|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##NM_001080546|TMEM218|219854|transmembrane protein 218	0.94143	CTCF.p2:-20:0.941
chr5	141071761	141071889	reg1001463.p1	16.468	+	TSC_hg19_v1_chr5_-_141061801 NM_022481	-10008	-	AJ310567 TSC_hg19_v1_chr5_-_141061794 AK091385 AX746950 AK290052	-10053	-	TSC_hg19_v1_chr5_-_141030986 AY217346 NM_033449	-40842	-	CU690208 TSC_hg19_v1_chr5_-_141257848	186014	-	BC035812 NM_002587 NM_032420 BC051287 BC075821 TSC_hg19_v1_chr5_-_141257976 AK289512	186134	-	TSC_hg19_v1_chr5_+_141303403 NM_001142603 NM_014773 BC007855 D50931 AK292869	231584	+	NM_022481|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AJ310567|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK091385|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK290052|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AY217346|FCHSD1|89848|FCH and double SH3 domains 1##NM_033449|FCHSD1|89848|FCH and double SH3 domains 1##BC035812|PCDH1|5097|protocadherin 1##NM_002587|PCDH1|5097|protocadherin 1##NM_032420|PCDH1|5097|protocadherin 1##BC051287|PCDH1|5097|protocadherin 1##BC075821|PCDH1|5097|protocadherin 1##AK289512|PCDH1|5097|protocadherin 1##NM_001142603|KIAA0141|9812|KIAA0141##NM_014773|KIAA0141|9812|KIAA0141##BC007855|KIAA0141|9812|KIAA0141##D50931|KIAA0141|9812|KIAA0141##AK292869|KIAA0141|9812|KIAA0141	0.999218	CTCF.p2:-11:0.999
chr13	78326104	78326238	reg1001591.p1	16.467	+	NM_001242869 NM_001242870 NM_001242871 NM_144595 AL834203 AK289600 BC045177 AK289714 AK295423	-10765	+	AK294201 NM_001040153	-53156	+	TSC_hg19_v1_chr13_+_78271822 NM_001242868	-54267	+	TSC_hg19_v1_chr13_-_78492936 L06623 X99250 S44866 BC014472 AB209198 AK290699 NM_001122659 NM_003991	166781	-	AF114163 AF114164 TSC_hg19_v1_chr13_-_78493569	167380	-	AF114165 NM_001201397	167731	-	NM_001242869|SLAIN1|122060|SLAIN motif family, member 1##NM_001242870|SLAIN1|122060|SLAIN motif family, member 1##NM_001242871|SLAIN1|122060|SLAIN motif family, member 1##NM_144595|SLAIN1|122060|SLAIN motif family, member 1##AL834203|SLAIN1|122060|SLAIN motif family, member 1##AK289600|SLAIN1|122060|SLAIN motif family, member 1##BC045177|SLAIN1|122060|SLAIN motif family, member 1##AK289714|SLAIN1|122060|SLAIN motif family, member 1##AK295423|SLAIN1|122060|SLAIN motif family, member 1##AK294201|SLAIN1|122060|SLAIN motif family, member 1##NM_001040153|SLAIN1|122060|SLAIN motif family, member 1##NM_001242868|SLAIN1|122060|SLAIN motif family, member 1##L06623|EDNRB|1910|endothelin receptor type B##X99250|EDNRB|1910|endothelin receptor type B##S44866|EDNRB|1910|endothelin receptor type B##BC014472|EDNRB|1910|endothelin receptor type B##AB209198|EDNRB|1910|endothelin receptor type B##AK290699|EDNRB|1910|endothelin receptor type B##NM_001122659|EDNRB|1910|endothelin receptor type B##NM_003991|EDNRB|1910|endothelin receptor type B##AF114165|EDNRB|1910|endothelin receptor type B##NM_001201397|EDNRB|1910|endothelin receptor type B	0.666463	CTCF.p2:14:0.605
chr9	133922225	133922357	reg1001590.p1	16.466	+	AF041835 NM_006059 TSC_hg19_v1_chr9_+_133884573 AK075536	-37741	+	AK300287 NM_001145106 TSC_hg19_v1_chr9_-_133814549	-107800	-	BC032953 NM_032843 TSC_hg19_v1_chr9_-_133814253	-108047	-	NM_001185095 NM_001185096 NM_031426 TSC_hg19_v1_chr9_+_133971890	49587	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	49667	+	TSC_hg19_v1_chr9_+_134000975 BC105998 AK307573 NM_005085 AL832609 X64228 BC045620 BC012500	78683	+	AF041835|LAMC3|10319|laminin, gamma 3##NM_006059|LAMC3|10319|laminin, gamma 3##AK075536|LAMC3|10319|laminin, gamma 3##AK300287|FIBCD1|84929|fibrinogen C domain containing 1##NM_001145106|FIBCD1|84929|fibrinogen C domain containing 1##BC032953|FIBCD1|84929|fibrinogen C domain containing 1##NM_032843|FIBCD1|84929|fibrinogen C domain containing 1##NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like##NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like##NM_031426|AIF1L|83543|allograft inflammatory factor 1-like##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like##BC105998|NUP214|8021|nucleoporin 214kDa##AK307573|NUP214|8021|nucleoporin 214kDa##NM_005085|NUP214|8021|nucleoporin 214kDa##AL832609|NUP214|8021|nucleoporin 214kDa##X64228|NUP214|8021|nucleoporin 214kDa##BC045620|NUP214|8021|nucleoporin 214kDa##BC012500|NUP214|8021|nucleoporin 214kDa	0.991825	CTCF.p2:7:0.992
chr22	38749252	38749388	reg1000822.p1	16.464	+	AB024597 NM_001894	-35232	-	TSC_hg19_v1_chr22_-_38713439 NM_152221	-35906	-	BC006490 AB091043 TSC_hg19_v1_chr22_-_38713340 AK223498	-36029	-	TSC_hg19_v1_chr22_-_38794883 AK307225 AK310303	45548	-	NM_004981 S72503 U07364	90712	-	CR456507 BC039618 U24056 NM_152868 BC032562	101788	-	AB024597|CSNK1E|1454|casein kinase 1, epsilon##NM_001894|CSNK1E|1454|casein kinase 1, epsilon##NM_152221|CSNK1E|1454|casein kinase 1, epsilon##BC006490|CSNK1E|1454|casein kinase 1, epsilon##AB091043|CSNK1E|1454|casein kinase 1, epsilon##AK223498|CSNK1E|1454|casein kinase 1, epsilon##AK307225|LOC400927|400927|TPTE and PTEN homologous inositol lipid phosphatase pseudogene##NM_004981|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##S72503|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##U07364|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##CR456507|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##BC039618|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##U24056|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##NM_152868|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##BC032562|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4	0.823179	CTCF.p2:2:0.823
chr14	53427953	53428067	reg1000896.p1	16.463	+	TSC_hg19_v1_chr14_-_53417903 BC017327 NM_001134999 NM_001135000 NM_006832	-10143	-	Z24725 AF443279 TSC_hg19_v1_chr14_-_53417769 BX161467 AK291738	-10290	-	TSC_hg19_v1_chr14_-_53417272 EU979385 CU675940 EU831994 EU832087	-10731	-	TSC_hg19_v1_chr14_-_53619887 AK125372	191863	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	191958	-	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	192040	-	BC017327|FERMT2|10979|fermitin family member 2##NM_001134999|FERMT2|10979|fermitin family member 2##NM_001135000|FERMT2|10979|fermitin family member 2##NM_006832|FERMT2|10979|fermitin family member 2##Z24725|FERMT2|10979|fermitin family member 2##AF443279|FERMT2|10979|fermitin family member 2##BX161467|FERMT2|10979|fermitin family member 2##AK291738|FERMT2|10979|fermitin family member 2##EU979385|FERMT2|10979|fermitin family member 2##EU831994|FERMT2|10979|fermitin family member 2##EU832087|FERMT2|10979|fermitin family member 2##AK125372|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1	0.569757	CTCF.p2:20:0.570
chr17	46891907	46892036	reg1001471.p1	16.462	+	CU689652 BC033563 NM_173623 AK310321	-20326	-	BT007410 AB464574 DQ893517 DQ896496 U57052 BC007092 BC070233 AK313266 AK225234 NM_006361 AY937237	-85935	-	BC030950 AF331165 NM_032391	-92091	-	AK097392 AK302952 BC041368 AL834151 NM_001130918	2453	-	NM_005831 AK293329 TSC_hg19_v1_chr17_+_46908406 AK293137 AK303313 AK304024 AK310648 AK314796 U22897 AK222666 AK223227 AK298177 BC004130	16419	+	AK095669 TSC_hg19_v1_chr17_+_46970178 NM_001002027 NM_005175 AL080089 AK311848 D13118	78214	+	BC033563|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_173623|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK310321|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BT007410|HOXB13|10481|homeobox B13##DQ893517|HOXB13|10481|homeobox B13##DQ896496|HOXB13|10481|homeobox B13##U57052|HOXB13|10481|homeobox B13##BC007092|HOXB13|10481|homeobox B13##BC070233|HOXB13|10481|homeobox B13##AK313266|HOXB13|10481|homeobox B13##AK225234|HOXB13|10481|homeobox B13##NM_006361|HOXB13|10481|homeobox B13##AY937237|HOXB13|10481|homeobox B13##BC030950|PRAC|84366|prostate cancer susceptibility candidate##AF331165|PRAC|84366|prostate cancer susceptibility candidate##NM_032391|PRAC|84366|prostate cancer susceptibility candidate##AK097392|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK302952|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC041368|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AL834151|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_001130918|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_005831|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293329|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293137|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK303313|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK304024|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK314796|CALCOCO2|10241|calcium binding and coiled-coil domain 2##U22897|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK222666|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK223227|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK298177|CALCOCO2|10241|calcium binding and coiled-coil domain 2##BC004130|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK095669|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_001002027|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_005175|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AL080089|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AK311848|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##D13118|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)	0.996588	CTCF.p2:-2:0.997
chr10	99491627	99491754	reg1001551.p1	16.461	+	BC062544 BC004995 TSC_hg19_v1_chr10_+_99473485 AF325259	-18209	+	TSC_hg19_v1_chr10_+_99473461 NM_031484	-18226	+	TSC_hg19_v1_chr10_-_99446983 AK223099 AF218019 AK024533 AK222493 AF131791 NM_021732 AF241786 AY505173	-44661	-	TSC_hg19_v1_chr10_+_99496884 AK296295 NM_001002262 NM_001174119 NM_001174120 NM_001174121 NM_001174122 NM_144588 AK057481 AK097945 AK299735 AK300438 BC030621	5178	+	TSC_hg19_v1_chr10_+_99496891 AK074876	5203	+	TSC_hg19_v1_chr10_+_99496905 AK296588	5227	+	BC062544|MARVELD1|83742|MARVEL domain containing 1##BC004995|MARVELD1|83742|MARVEL domain containing 1##AF325259|MARVELD1|83742|MARVEL domain containing 1##NM_031484|MARVELD1|83742|MARVEL domain containing 1##AK223099|AVPI1|60370|arginine vasopressin-induced 1##AF218019|AVPI1|60370|arginine vasopressin-induced 1##AK024533|AVPI1|60370|arginine vasopressin-induced 1##AK222493|AVPI1|60370|arginine vasopressin-induced 1##AF131791|AVPI1|60370|arginine vasopressin-induced 1##NM_021732|AVPI1|60370|arginine vasopressin-induced 1##AF241786|AVPI1|60370|arginine vasopressin-induced 1##AK296295|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001002262|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174119|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174120|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174121|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174122|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_144588|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK057481|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK097945|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK299735|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK300438|ZFYVE27|118813|zinc finger, FYVE domain containing 27##BC030621|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK074876|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK296588|ZFYVE27|118813|zinc finger, FYVE domain containing 27	0.932213	CTCF.p2:14:0.932
chr9	87396467	87396602	reg1001588.p1	16.461	+	U12140 TSC_hg19_v1_chr9_+_87285349	-111202	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-111782	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-111838	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	960337	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	1159540	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	1159644	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.994211	CTCF.p2:5:0.994
chr14	94603162	94603291	reg1001465.p1	16.459	+	TSC_hg19_v1_chr14_-_94595942 NM_032036	-7286	-	BC032626 TSC_hg19_v1_chr14_-_94595922 AF208232	-7308	-	NM_001130080 NM_005532 TSC_hg19_v1_chr14_+_94577081 AK289535 AK097084 AK312089 BX647330 AJ294851 AY126456 AY126457 AY126458 BC015492	-26107	+	NM_020958 NM_058237 BC002650 BC068491 AB046842 AB385489 CU686649	37498	+	AF181467 NM_016186	156134	-	TSC_hg19_v1_chr14_-_94759564 AY358597 AK314877	156336	-	NM_032036|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2##BC032626|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2##AF208232|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2##NM_001130080|IFI27|3429|interferon, alpha-inducible protein 27##NM_005532|IFI27|3429|interferon, alpha-inducible protein 27##AK289535|IFI27|3429|interferon, alpha-inducible protein 27##AK097084|IFI27|3429|interferon, alpha-inducible protein 27##AK312089|IFI27|3429|interferon, alpha-inducible protein 27##BX647330|IFI27|3429|interferon, alpha-inducible protein 27##AJ294851|IFI27|3429|interferon, alpha-inducible protein 27##AY126456|IFI27|3429|interferon, alpha-inducible protein 27##AY126457|IFI27|3429|interferon, alpha-inducible protein 27##AY126458|IFI27|3429|interferon, alpha-inducible protein 27##BC015492|IFI27|3429|interferon, alpha-inducible protein 27##NM_020958|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##NM_058237|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##BC002650|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##BC068491|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##AB046842|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##AF181467|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##NM_016186|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##AY358597|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##AK314877|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10	0.996231	CTCF.p2:3:0.996
chr17	3730556	3730689	reg1001526.p1	16.459	+	TSC_hg19_v1_chr17_-_3704490 BC113436 BC117207 NM_002208	-26111	-	HQ258689 TSC_hg19_v1_chr17_-_3704463	-26169	-	TSC_hg19_v1_chr17_+_3627210 AK310546 AK315247 BC036181 NM_031965 AK056691 AB039834 AF289865 BC050662 AK292715 BC016626 BC047457	-103406	+	TSC_hg19_v1_chr17_-_3749541 NM_001114118 NM_018553	18888	-	AF425301 NM_172206	63414	-	BC031647 TSC_hg19_v1_chr17_-_3796278 AF425232 BC043487	65669	-	BC113436|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC117207|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_002208|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##HQ258689|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC036181|GSG2|83903|germ cell associated 2 (haspin)##NM_031965|GSG2|83903|germ cell associated 2 (haspin)##AK056691|GSG2|83903|germ cell associated 2 (haspin)##AB039834|GSG2|83903|germ cell associated 2 (haspin)##AF289865|GSG2|83903|germ cell associated 2 (haspin)##BC050662|GSG2|83903|germ cell associated 2 (haspin)##AK292715|GSG2|83903|germ cell associated 2 (haspin)##BC016626|GSG2|83903|germ cell associated 2 (haspin)##BC047457|GSG2|83903|germ cell associated 2 (haspin)##NM_001114118|C17orf85|55421|chromosome 17 open reading frame 85##NM_018553|C17orf85|55421|chromosome 17 open reading frame 85##AF425301|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_172206|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##BC031647|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##AF425232|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##BC043487|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha	0.980761	CTCF.p2:18:0.981
chr3	8664708	8664833	reg1001255.p1	16.450	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	-121189	+	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	-121255	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	-121440	-	TSC_hg19_v1_chr3_-_8693765 AB024705 NM_015931 BC052614	28984	-	AK291892 NM_001234 NM_033337 BC069368 AF036365 BC102033 BC102036 BC102037 Y14747 CU686780 AF043101	110755	+	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	146316	-	AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AB024705|C3orf32|51066|chromosome 3 open reading frame 32##NM_015931|C3orf32|51066|chromosome 3 open reading frame 32##BC052614|C3orf32|51066|chromosome 3 open reading frame 32##AK291892|CAV3|859|caveolin 3##NM_001234|CAV3|859|caveolin 3##NM_033337|CAV3|859|caveolin 3##BC069368|CAV3|859|caveolin 3##AF036365|CAV3|859|caveolin 3##BC102033|CAV3|859|caveolin 3##BC102036|CAV3|859|caveolin 3##BC102037|CAV3|859|caveolin 3##Y14747|CAV3|859|caveolin 3##AF043101|CAV3|859|caveolin 3##X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor	0.999594	CTCF.p2:10:1.000
chr8	132816562	132816684	reg1001711.p1	16.446	+	NM_001115	-763789	-	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	-1360592	-	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-1787740	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	99734	+	TSC_hg19_v1_chr8_+_132916379 BC108667	99754	+	AK307433 TSC_hg19_v1_chr8_+_132916394	99767	+	NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC108667|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##AK307433|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.97168	CTCF.p2:15:0.972
chr1	29360482	29360611	reg1001510.p1	16.442	+	TSC_hg19_v1_chr1_-_29309157 D28453	-51421	-	TSC_hg19_v1_chr1_+_29241080 NM_001166006 BC039079 AK310655	-119465	+	TSC_hg19_v1_chr1_+_29213624 M14993 M61733 J03796	-146889	+	BC110336 NM_001171868	88466	-	BC064375 BC082989 NM_001003682	89867	-	AB527790 BT007415 CU678194 DQ893846 L14076 TSC_hg19_v1_chr1_-_29508334	147759	-	NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M14993|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M61733|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##J03796|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##BC110336|TMEM200B|399474|transmembrane protein 200B##NM_001171868|TMEM200B|399474|transmembrane protein 200B##BC064375|TMEM200B|399474|transmembrane protein 200B##BC082989|TMEM200B|399474|transmembrane protein 200B##NM_001003682|TMEM200B|399474|transmembrane protein 200B##BT007415|SRSF4|6429|serine/arginine-rich splicing factor 4##DQ893846|SRSF4|6429|serine/arginine-rich splicing factor 4##L14076|SRSF4|6429|serine/arginine-rich splicing factor 4	0.972598	CTCF.p2:8:0.973
chr2	172968676	172968812	reg1001489.p1	16.442	+	AK291367 AK316129 TSC_hg19_v1_chr2_-_172967629	-1115	-	TSC_hg19_v1_chr2_-_172967234 HQ258018 AB208823 AK297503 BC032558 NM_004405	-1389	-	L07919 TSC_hg19_v1_chr2_-_172967055	-1710	-	AK311695 AK296496 TSC_hg19_v1_chr2_+_173292147	323383	+	TSC_hg19_v1_chr2_+_173292316 NM_000210 NM_001079818 BC007002	323576	+	TSC_hg19_v1_chr2_+_173292395 X53586 BC136455 BC136456 X59512 AB208842	323735	+	AK291367|DLX2|1746|distal-less homeobox 2##AK316129|DLX2|1746|distal-less homeobox 2##HQ258018|DLX2|1746|distal-less homeobox 2##AB208823|DLX2|1746|distal-less homeobox 2##AK297503|DLX2|1746|distal-less homeobox 2##BC032558|DLX2|1746|distal-less homeobox 2##NM_004405|DLX2|1746|distal-less homeobox 2##L07919|DLX2|1746|distal-less homeobox 2##AK311695|ITGA6|3655|integrin, alpha 6##AK296496|ITGA6|3655|integrin, alpha 6##NM_000210|ITGA6|3655|integrin, alpha 6##NM_001079818|ITGA6|3655|integrin, alpha 6##BC007002|ITGA6|3655|integrin, alpha 6##X53586|ITGA6|3655|integrin, alpha 6##BC136455|ITGA6|3655|integrin, alpha 6##BC136456|ITGA6|3655|integrin, alpha 6##X59512|ITGA6|3655|integrin, alpha 6##AB208842|ITGA6|3655|integrin, alpha 6	0.999602	CTCF.p2:15:1.000
chr11	65083154	65083297	reg1001325.p1	16.441	+	NM_006779 TSC_hg19_v1_chr11_+_65082336 AF001436 AF163840 AK315444 BC075834	-888	+	TSC_hg19_v1_chr11_+_65029432 AK309284 BC001347 BC002990 BC018813 BC018814 NM_002689 AK297842 AK307831 AK025315	-53819	+	AK131327 NM_001004326 BC146850	-101911	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	18059	+	TSC_hg19_v1_chr11_+_65101347 BC014889 AK291944 U94585 AB463002 BT006718 DQ892397 DQ895612	18126	+	NM_145719	39056	+	NM_006779|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF001436|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF163840|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AK315444|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##BC075834|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AK309284|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC001347|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC002990|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018813|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018814|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_002689|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK297842|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK307831|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK025315|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK131327|SLC22A20|440044|solute carrier family 22, member 20##NM_001004326|SLC22A20|440044|solute carrier family 22, member 20##BC146850|SLC22A20|440044|solute carrier family 22, member 20##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2##BC014889|DPF2|5977|D4, zinc and double PHD fingers family 2##AK291944|DPF2|5977|D4, zinc and double PHD fingers family 2##U94585|DPF2|5977|D4, zinc and double PHD fingers family 2##BT006718|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ892397|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ895612|DPF2|5977|D4, zinc and double PHD fingers family 2##NM_145719|TIGD3|220359|tigger transposable element derived 3	0.985379	CTCF.p2:-4:0.985
chr16	147036	147145	reg1000861.p2	16.441	+	TSC_hg19_v1_chr16_+_128241 AK308654 AY258284 L10752 AB463933 CU677157 DQ895912	-18820	+	TSC_hg19_v1_chr16_+_128229 BC014991	-18863	+	NM_001015052 NM_002434 TSC_hg19_v1_chr16_+_128206	-18903	+	AK298795 BC004185 BC012825 AK300736 BC020392 TSC_hg19_v1_chr16_-_188638	41364	-	TSC_hg19_v1_chr16_-_188673 AK090717 AK294228 NM_001039476 NM_001077350 NM_001243247 NM_001243248 NM_001243249	41589	-	NM_005332 BC027892 M24173 AB590422 DQ894080 EU176221 CR456848	55790	+	AK308654|MPG|4350|N-methylpurine-DNA glycosylase##AY258284|MPG|4350|N-methylpurine-DNA glycosylase##L10752|MPG|4350|N-methylpurine-DNA glycosylase##DQ895912|MPG|4350|N-methylpurine-DNA glycosylase##BC014991|MPG|4350|N-methylpurine-DNA glycosylase##NM_001015052|MPG|4350|N-methylpurine-DNA glycosylase##NM_002434|MPG|4350|N-methylpurine-DNA glycosylase##AK298795|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##BC004185|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##BC012825|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##AK300736|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##BC020392|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##AK090717|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##AK294228|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001039476|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001077350|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001243247|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001243248|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001243249|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_005332|HBZ|3050|hemoglobin, zeta##BC027892|HBZ|3050|hemoglobin, zeta##M24173|HBZ|3050|hemoglobin, zeta##DQ894080|HBZ|3050|hemoglobin, zeta##EU176221|HBZ|3050|hemoglobin, zeta##CR456848|HBZ|3050|hemoglobin, zeta	1.534305	CTCF.p2:8:0.221	CTCF.p2:20:0.300	CTCF.p2:-23:1.000
chr19	46991209	46991339	reg1001519.p1	16.440	+	TSC_hg19_v1_chr19_-_46974789 BC032508 NM_001103149 NM_018215	-16469	-	AL834344 TSC_hg19_v1_chr19_-_46974751 AK290218 BC051688	-16552	-	AK297668 AL136609 JN703457 NM_032040	-74403	-	TSC_hg19_v1_chr19_-_46999149 AK124720 NM_020709	7887	-	TSC_hg19_v1_chr19_+_47104390 BC006182	113123	+	AK094504 NM_001205281	113182	-	BC032508|PNMAL1|55228|PNMA-like 1##NM_001103149|PNMAL1|55228|PNMA-like 1##NM_018215|PNMAL1|55228|PNMA-like 1##AL834344|PNMAL1|55228|PNMA-like 1##AK290218|PNMAL1|55228|PNMA-like 1##BC051688|PNMAL1|55228|PNMA-like 1##AK297668|CCDC8|83987|coiled-coil domain containing 8##AL136609|CCDC8|83987|coiled-coil domain containing 8##JN703457|CCDC8|83987|coiled-coil domain containing 8##NM_032040|CCDC8|83987|coiled-coil domain containing 8##AK124720|PNMAL2|57469|PNMA-like 2##NM_020709|PNMAL2|57469|PNMA-like 2##BC006182|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##AK094504|LOC100506012|100506012|serine/threonine-protein phosphatase 5-like##NM_001205281|LOC100506012|100506012|serine/threonine-protein phosphatase 5-like	0.861378	CTCF.p2:9:0.861
chr13	31377133	31377268	reg1001423.p1	16.438	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	-67485	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	-67536	+	AK314143 NM_001204406	-89586	+	NM_032849 AK055635 TSC_hg19_v1_chr13_+_31480407 AL832478 BC040165 BC101624 BC101626 CU691826	103280	+	TSC_hg19_v1_chr13_+_31506809 BC030277 NM_152325 CU688876	129630	+	CU691504 DQ891727 DQ894904 AF039695 TSC_hg19_v1_chr13_-_31735849	358594	-	BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_032849|C13orf33|84935|chromosome 13 open reading frame 33##AK055635|C13orf33|84935|chromosome 13 open reading frame 33##BC040165|C13orf33|84935|chromosome 13 open reading frame 33##BC101624|C13orf33|84935|chromosome 13 open reading frame 33##BC101626|C13orf33|84935|chromosome 13 open reading frame 33##BC030277|C13orf26|122046|chromosome 13 open reading frame 26##NM_152325|C13orf26|122046|chromosome 13 open reading frame 26##DQ891727|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ894904|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AF039695|HSPH1|10808|heat shock 105kDa/110kDa protein 1	0.957474	CTCF.p2:6:0.957
chr22	24921521	24921646	reg1000706.p1	16.437	+	AK314727 CR627429 CR456375 NM_016327 BC131703 TSC_hg19_v1_chr22_+_24891299 AF163312 AB013885 BC033388 AB528843 BC139840 BC139843 CU013080 CU013368	-30342	+	NM_000675 AK123058 EU036693 AK301420 BC013780	-98018	+	TSC_hg19_v1_chr22_+_24819870 EU036694	-101703	+	CU687038 TSC_hg19_v1_chr22_-_24951093 BC053529 AK296893	29462	-	TSC_hg19_v1_chr22_-_24951145 AK054681 AK294972	29560	-	TSC_hg19_v1_chr22_-_24951160 BC070109 NM_031444	29631	-	AK314727|UPB1|51733|ureidopropionase, beta##CR627429|UPB1|51733|ureidopropionase, beta##CR456375|UPB1|51733|ureidopropionase, beta##NM_016327|UPB1|51733|ureidopropionase, beta##BC131703|UPB1|51733|ureidopropionase, beta##AF163312|UPB1|51733|ureidopropionase, beta##AB013885|UPB1|51733|ureidopropionase, beta##BC033388|UPB1|51733|ureidopropionase, beta##BC139840|UPB1|51733|ureidopropionase, beta##BC139843|UPB1|51733|ureidopropionase, beta##CU013080|UPB1|51733|ureidopropionase, beta##CU013368|UPB1|51733|ureidopropionase, beta##NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor##EU036694|ADORA2A|135|adenosine A2a receptor##BC053529|C22orf13|83606|chromosome 22 open reading frame 13##AK296893|C22orf13|83606|chromosome 22 open reading frame 13##AK054681|C22orf13|83606|chromosome 22 open reading frame 13##AK294972|C22orf13|83606|chromosome 22 open reading frame 13##BC070109|C22orf13|83606|chromosome 22 open reading frame 13##NM_031444|C22orf13|83606|chromosome 22 open reading frame 13	0.984299	CTCF.p2:13:0.984
chr22	39566930	39567040	reg1000697.p1	16.436	+	DQ064603 AB528611 EU446785 CU690844 BC051773 TSC_hg19_v1_chr22_-_39548584 NM_175709 AK124408	-18418	-	TSC_hg19_v1_chr22_-_39529023 BC128418	-37938	-	NM_001166002 NM_001166003 NM_001166004 NM_181773 BC069023 CR456481	-73715	+	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	69924	-	CR541807 CU013138 CU013426 AB590092 TSC_hg19_v1_chr22_-_39639984 CR456538 X02744	73040	-	NM_002608 X02811 TSC_hg19_v1_chr22_-_39640988 M12783	74022	-	DQ064603|CBX7|23492|chromobox homolog 7##EU446785|CBX7|23492|chromobox homolog 7##BC051773|CBX7|23492|chromobox homolog 7##NM_175709|CBX7|23492|chromobox homolog 7##BC128418|CBX7|23492|chromobox homolog 7##NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR541807|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013138|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013426|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR456538|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02744|PDGFB|5155|platelet-derived growth factor beta polypeptide##NM_002608|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02811|PDGFB|5155|platelet-derived growth factor beta polypeptide##M12783|PDGFB|5155|platelet-derived growth factor beta polypeptide	0.999602	CTCF.p2:-12:1.000
chr17	1419043	1419174	reg1000932.p2	16.430	+	U45973 TSC_hg19_v1_chr17_-_1413071	-6075	-	AB210015 AK172742 AK292910 TSC_hg19_v1_chr17_-_1395993 BC068013 NM_001080779	-23133	-	TSC_hg19_v1_chr17_-_1394974 NM_033375	-24163	-	TSC_hg19_v1_chr17_-_1419907 DQ892815 DQ896061 AB529166 AK297955 AK303907 AK307293 AB036829 AB036830 AK312585 BC004362	858	-	TSC_hg19_v1_chr17_-_1420177 AK312844 NM_001135642 NM_016532 NM_130766	1071	-	BC082976 TSC_hg19_v1_chr17_-_1466077 BC027177 D30036 M73704 BC045108 BC068538 NM_006224	46974	-	U45973|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB210015|MYO1C|4641|myosin IC##AK172742|MYO1C|4641|myosin IC##AK292910|MYO1C|4641|myosin IC##BC068013|MYO1C|4641|myosin IC##NM_001080779|MYO1C|4641|myosin IC##NM_033375|MYO1C|4641|myosin IC##DQ892815|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ896061|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK297955|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK303907|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK307293|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036829|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036830|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312585|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC004362|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312844|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_001135642|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_016532|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_130766|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC082976|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC027177|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D30036|PITPNA|5306|phosphatidylinositol transfer protein, alpha##M73704|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC045108|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC068538|PITPNA|5306|phosphatidylinositol transfer protein, alpha##NM_006224|PITPNA|5306|phosphatidylinositol transfer protein, alpha	0.705418	CTCF.p2:8:0.705
chr8	85944309	85944449	reg1001856.p1	16.430	+	NM_001100391 BC031090	-847275	+	TSC_hg19_v1_chr8_+_85095702 AK095026	-848644	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	-848836	+	AK300234 NM_033402 TSC_hg19_v1_chr8_+_86019350	74968	+	TSC_hg19_v1_chr8_+_86019442 BC030701 BC070092 AK056185 AK300874 AK302648 AK307350 AK307636 AK307443	75090	+	NM_001083588 NM_001951 U31556 TSC_hg19_v1_chr8_+_86089622 Z78409 X86097	145242	+	NM_001100391|RALYL|138046|RALY RNA binding protein-like##BC031090|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK300234|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_033402|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC030701|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC070092|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK056185|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK300874|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK302648|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307350|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307636|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307443|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_001083588|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001951|E2F5|1875|E2F transcription factor 5, p130-binding##U31556|E2F5|1875|E2F transcription factor 5, p130-binding##Z78409|E2F5|1875|E2F transcription factor 5, p130-binding##X86097|E2F5|1875|E2F transcription factor 5, p130-binding	0.99823	CTCF.p2:18:0.998
chr6	160362863	160362986	reg1000430.p1	16.428	+	BC069142 BC069581 BC110454 NM_002377 CU686912 CR542261	-34945	+	TSC_hg19_v1_chr6_+_160221313 AK097559 NM_173516 AK093139 AX747947 BC112246	-141581	+	TSC_hg19_v1_chr6_+_160211500 NM_014161 AF161556 BC001623 AL136633 AK292647 AB528185 AM393775 CR533491	-151374	+	TSC_hg19_v1_chr6_+_160390137 NM_000876 Y00285 J03528	27209	+	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	179990	+	CU689064 BC039899 AK290787 X98333 AB075951 BC030978 NM_003058	316951	-	BC069142|MAS1|4142|MAS1 oncogene##BC069581|MAS1|4142|MAS1 oncogene##BC110454|MAS1|4142|MAS1 oncogene##NM_002377|MAS1|4142|MAS1 oncogene##CR542261|MAS1|4142|MAS1 oncogene##AK097559|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_173516|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##AK093139|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##BC112246|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_014161|MRPL18|29074|mitochondrial ribosomal protein L18##AF161556|MRPL18|29074|mitochondrial ribosomal protein L18##BC001623|MRPL18|29074|mitochondrial ribosomal protein L18##AL136633|MRPL18|29074|mitochondrial ribosomal protein L18##AM393775|MRPL18|29074|mitochondrial ribosomal protein L18##CR533491|MRPL18|29074|mitochondrial ribosomal protein L18##NM_000876|IGF2R|3482|insulin-like growth factor 2 receptor##Y00285|IGF2R|3482|insulin-like growth factor 2 receptor##J03528|IGF2R|3482|insulin-like growth factor 2 receptor##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC039899|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AK290787|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##X98333|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AB075951|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC030978|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003058|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2	0.997774	CTCF.p2:13:0.998
chr6	21589591	21589703	reg1000921.p1	16.428	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1054924	+	CR749285 NM_001243076	-1185614	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-1187544	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	4725	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	77012	+	BC015850 NM_000948	708082	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.923932	CTCF.p2:10:0.924
chr5	172405882	172405999	reg1001074.p1	16.426	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	-19492	+	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	-144622	+	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	-207729	-	NM_003945 TSC_hg19_v1_chr5_+_172410801 BC119715 BC119714 AK312068 Y15286	4842	+	TSC_hg19_v1_chr5_+_172410833 CR456856 CR542131	4904	+	TSC_hg19_v1_chr5_+_172483354 BX647768 NM_001168393 NM_001168394 NM_153607 AK300043 AY139008 BC041709 AY174896 AK124117 BX647573 AK291677	77444	+	BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##NM_003945|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119715|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119714|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##AK312068|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##Y15286|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR456856|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR542131|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BX647768|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41##NM_153607|C5orf41|153222|chromosome 5 open reading frame 41##AK300043|C5orf41|153222|chromosome 5 open reading frame 41##AY139008|C5orf41|153222|chromosome 5 open reading frame 41##BC041709|C5orf41|153222|chromosome 5 open reading frame 41##AY174896|C5orf41|153222|chromosome 5 open reading frame 41##AK124117|C5orf41|153222|chromosome 5 open reading frame 41##BX647573|C5orf41|153222|chromosome 5 open reading frame 41##AK291677|C5orf41|153222|chromosome 5 open reading frame 41	0.0	
chr14	59911048	59911171	reg1001403.p1	16.425	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	-255705	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-806363	+	AK302579 NM_001244193 AK310356 AK302718	-1004683	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	20813	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	20947	-	TSC_hg19_v1_chr14_-_59951106 AK058165 NM_144581 BC012131	39971	-	BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135##AK058165|C14orf149|112849|chromosome 14 open reading frame 149##NM_144581|C14orf149|112849|chromosome 14 open reading frame 149##BC012131|C14orf149|112849|chromosome 14 open reading frame 149	0.085065	
chr1	159130920	159131037	reg1001289.p1	16.423	+	AK292042 BC010940 AF024714 NM_004833	-84378	-	NM_001206567 NM_005531 TSC_hg19_v1_chr1_+_158979716 AF208043 M63838 AB208989 BC017059 AF086545 AK296228 AK307957	-151188	+	NM_152501 NM_198928 NM_198929 NM_198930 AY185344 AY185345 AY185346 AY185347 BC090944 AK308350 BC020822 BC073133 BC114470 BC139741	-229619	+	AK289541 NM_021189 TSC_hg19_v1_chr1_+_159141404 AK308915 NM_001127173 AF363367 AY358332 AF062733 BC033819 AY046418 AF529206 DQ890848 DQ894002	10487	+	AK291593 NM_002036	42824	+	NM_001122951 U01839	44070	+	AK292042|AIM2|9447|absent in melanoma 2##BC010940|AIM2|9447|absent in melanoma 2##AF024714|AIM2|9447|absent in melanoma 2##NM_004833|AIM2|9447|absent in melanoma 2##NM_001206567|IFI16|3428|interferon, gamma-inducible protein 16##NM_005531|IFI16|3428|interferon, gamma-inducible protein 16##AF208043|IFI16|3428|interferon, gamma-inducible protein 16##M63838|IFI16|3428|interferon, gamma-inducible protein 16##AB208989|IFI16|3428|interferon, gamma-inducible protein 16##BC017059|IFI16|3428|interferon, gamma-inducible protein 16##AF086545|IFI16|3428|interferon, gamma-inducible protein 16##AK296228|IFI16|3428|interferon, gamma-inducible protein 16##AK307957|IFI16|3428|interferon, gamma-inducible protein 16##NM_152501|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198928|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198929|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198930|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185344|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185345|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185346|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185347|PYHIN1|149628|pyrin and HIN domain family, member 1##BC090944|PYHIN1|149628|pyrin and HIN domain family, member 1##AK308350|PYHIN1|149628|pyrin and HIN domain family, member 1##BC020822|PYHIN1|149628|pyrin and HIN domain family, member 1##BC073133|PYHIN1|149628|pyrin and HIN domain family, member 1##BC114470|PYHIN1|149628|pyrin and HIN domain family, member 1##BC139741|PYHIN1|149628|pyrin and HIN domain family, member 1##AK289541|CADM3|57863|cell adhesion molecule 3##NM_021189|CADM3|57863|cell adhesion molecule 3##AK308915|CADM3|57863|cell adhesion molecule 3##NM_001127173|CADM3|57863|cell adhesion molecule 3##AF363367|CADM3|57863|cell adhesion molecule 3##AY358332|CADM3|57863|cell adhesion molecule 3##AF062733|CADM3|57863|cell adhesion molecule 3##BC033819|CADM3|57863|cell adhesion molecule 3##AY046418|CADM3|57863|cell adhesion molecule 3##AF529206|CADM3|57863|cell adhesion molecule 3##DQ890848|CADM3|57863|cell adhesion molecule 3##DQ894002|CADM3|57863|cell adhesion molecule 3##AK291593|DARC|2532|Duffy blood group, chemokine receptor##NM_002036|DARC|2532|Duffy blood group, chemokine receptor##NM_001122951|DARC|2532|Duffy blood group, chemokine receptor##U01839|DARC|2532|Duffy blood group, chemokine receptor	0.35787	CTCF.p2:18:0.358
chr1	205454730	205454867	reg1001437.p1	16.423	+	AB084764 AB084765 AB085610 AB096677 AB096678 AB096679 AB096680 AB096681 AB096682 BC036636 AK302392 NM_001001552 NM_001199050 NM_001199051 NM_001199052	-63602	-	AK299227 AK001610 NM_018203 AK096590	-128758	-	BC036076 TSC_hg19_v1_chr1_-_205313311	-141488	-	NM_002596 NM_212502 NM_212503 TSC_hg19_v1_chr1_+_205473688 AK293756 AK296320 AK295654	18907	+	AY353237 AY353240 TSC_hg19_v1_chr1_+_205473802 AY353238 BC011526 AY353239	19024	+	AK293816 NM_181644 TSC_hg19_v1_chr1_+_205538141	83329	+	AB084764|LEMD1|93273|LEM domain containing 1##AB084765|LEMD1|93273|LEM domain containing 1##AB085610|LEMD1|93273|LEM domain containing 1##AB096677|LEMD1|93273|LEM domain containing 1##AB096678|LEMD1|93273|LEM domain containing 1##AB096679|LEMD1|93273|LEM domain containing 1##AB096680|LEMD1|93273|LEM domain containing 1##AB096681|LEMD1|93273|LEM domain containing 1##AB096682|LEMD1|93273|LEM domain containing 1##BC036636|LEMD1|93273|LEM domain containing 1##AK302392|LEMD1|93273|LEM domain containing 1##NM_001001552|LEMD1|93273|LEM domain containing 1##NM_001199050|LEMD1|93273|LEM domain containing 1##NM_001199051|LEMD1|93273|LEM domain containing 1##NM_001199052|LEMD1|93273|LEM domain containing 1##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A##BC036076|KLHDC8A|55220|kelch domain containing 8A##NM_002596|CDK18|5129|cyclin-dependent kinase 18##NM_212502|CDK18|5129|cyclin-dependent kinase 18##NM_212503|CDK18|5129|cyclin-dependent kinase 18##AK293756|CDK18|5129|cyclin-dependent kinase 18##AK296320|CDK18|5129|cyclin-dependent kinase 18##AK295654|CDK18|5129|cyclin-dependent kinase 18##AY353237|CDK18|5129|cyclin-dependent kinase 18##AY353240|CDK18|5129|cyclin-dependent kinase 18##AY353238|CDK18|5129|cyclin-dependent kinase 18##BC011526|CDK18|5129|cyclin-dependent kinase 18##AY353239|CDK18|5129|cyclin-dependent kinase 18##AK293816|MFSD4|148808|major facilitator superfamily domain containing 4##NM_181644|MFSD4|148808|major facilitator superfamily domain containing 4	0.998692	CTCF.p2:13:0.999
chr20	60471436	60471570	reg1001828.p1	16.422	+	NM_001252339 AK124724	-296679	+	AK308345 NM_001252338	-397027	+	TSC_hg19_v1_chr20_+_59827453 BC101651 BC112150 NM_001794 AK315192 L34059	-643998	+	U75308 NM_003185 Y11354 TSC_hg19_v1_chr20_-_60640882	169376	-	TSC_hg19_v1_chr20_+_60697530 BC057387 NM_144703 BC035702	226011	+	TSC_hg19_v1_chr20_+_60697578 CU691202	226141	+	NM_001252339|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK124724|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK308345|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252338|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC101651|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC112150|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001794|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK315192|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##L34059|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##U75308|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##NM_003185|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##Y11354|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##BC057387|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##NM_144703|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##BC035702|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)	0.974107	CTCF.p2:6:0.974
chr1	94527114	94527230	reg1001334.p1	16.420	+	TSC_hg19_v1_chr1_-_94375075 AK290449	-152082	-	TSC_hg19_v1_chr1_-_94374987 NM_002061	-152168	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	-152210	-	AF001945 U88667 AK295818 AF000148 AB210040 DQ426859 NM_000350	59519	-	TSC_hg19_v1_chr1_-_94703141 BC093767 U90920 AK307733 BC022483	175892	-	TSC_hg19_v1_chr1_-_94703252 BC067839 NM_004815	176107	-	AK290449|GCLM|2730|glutamate-cysteine ligase, modifier subunit##NM_002061|GCLM|2730|glutamate-cysteine ligase, modifier subunit##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit##AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##BC093767|ARHGAP29|9411|Rho GTPase activating protein 29##U90920|ARHGAP29|9411|Rho GTPase activating protein 29##AK307733|ARHGAP29|9411|Rho GTPase activating protein 29##BC022483|ARHGAP29|9411|Rho GTPase activating protein 29##BC067839|ARHGAP29|9411|Rho GTPase activating protein 29##NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29	0.146144	
chr20	44002634	44002760	reg1001713.p2	16.419	+	TSC_hg19_v1_chr20_+_43992151 EU832322 EU832407	-10556	+	NM_001099791 NM_033542 TSC_hg19_v1_chr20_+_43991822 AK075264 AK172738 AX775821 BC048286 BC023562 AL591714 AK309429	-10880	+	NM_001197129	-12121	+	CU691416 BC036785 NM_014477 AB017802	4257	-	NM_001197139 NM_001048221 NM_001048222 TSC_hg19_v1_chr20_+_44034950 NM_001197140 AF220191 NM_018478	32140	+	TSC_hg19_v1_chr20_+_44035227 NM_001048223 NM_001048224 AJ276469 BC001105 BC012818 AL591565 AK000531	32624	+	EU832322|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##EU832407|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_001099791|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_033542|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK075264|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK172738|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC048286|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC023562|SYS1-DBNDD2|767557|SYS1-DBNDD2 readthrough##AL591714|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK309429|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_001197129|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC036785|TP53TG5|27296|TP53 target 5##NM_014477|TP53TG5|27296|TP53 target 5##AB017802|TP53TG5|27296|TP53 target 5##NM_001197139|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048221|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048222|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001197140|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AF220191|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_018478|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048223|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048224|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AJ276469|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##BC001105|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##BC012818|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AL591565|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AK000531|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	0.49545	CTCF.p2:-2:0.411
chr19	7633408	7633515	reg1000971.p1	16.418	+	TSC_hg19_v1_chr19_+_7600632 BC038229	-32693	+	TSC_hg19_v1_chr19_+_7600590 NM_001166114	-32867	+	TSC_hg19_v1_chr19_-_7600463 AK056629	-33000	-	TSC_hg19_v1_chr19_+_7660748 BC035808 NM_001080429 NM_020902 BC020431	27360	+	CR749864 TSC_hg19_v1_chr19_-_7692280	58781	-	TSC_hg19_v1_chr19_-_7694428 CU675557 DQ893187 DQ896508 BC007208 AB026111 AF258567 AF226051 NM_020196	60942	-	BC038229|PNPLA6|10908|patatin-like phospholipase domain containing 6##NM_001166114|PNPLA6|10908|patatin-like phospholipase domain containing 6##AK056629|LOC147791|147791|uncharacterized LOC147791##BC035808|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3##NM_001080429|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3##NM_020902|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3##BC020431|CAMSAP3|57662|calmodulin regulated spectrin-associated protein family, member 3##CR749864|XAB2|56949|XPA binding protein 2##DQ893187|XAB2|56949|XPA binding protein 2##DQ896508|XAB2|56949|XPA binding protein 2##BC007208|XAB2|56949|XPA binding protein 2##AB026111|XAB2|56949|XPA binding protein 2##AF258567|XAB2|56949|XPA binding protein 2##AF226051|XAB2|56949|XPA binding protein 2##NM_020196|XAB2|56949|XPA binding protein 2	0.999764	CTCF.p2:-19:1.000
chr1	2345939	2346076	reg1001702.p1	16.417	+	TSC_hg19_v1_chr1_-_2344008 AB013818 NM_002617 NM_153818	-1995	-	CR542077 DQ891961 DQ895151 TSC_hg19_v1_chr1_-_2343983 BC000543 AF060502 AK124816 BC018198	-2039	-	TSC_hg19_v1_chr1_+_2323292 AF091071	-22697	+	DQ176850 NM_014638 BC144620	61750	+	TSC_hg19_v1_chr1_-_2458040 AL442072 BC043496 AK001644 AK223546 AK303127 AK309860 NM_018216 AK295301	112057	-	BC087840 DQ272660 NM_001010926	115676	-	AB013818|PEX10|5192|peroxisomal biogenesis factor 10##NM_002617|PEX10|5192|peroxisomal biogenesis factor 10##NM_153818|PEX10|5192|peroxisomal biogenesis factor 10##CR542077|PEX10|5192|peroxisomal biogenesis factor 10##DQ891961|PEX10|5192|peroxisomal biogenesis factor 10##DQ895151|PEX10|5192|peroxisomal biogenesis factor 10##BC000543|PEX10|5192|peroxisomal biogenesis factor 10##AF060502|PEX10|5192|peroxisomal biogenesis factor 10##AK124816|PEX10|5192|peroxisomal biogenesis factor 10##BC018198|PEX10|5192|peroxisomal biogenesis factor 10##AF091071|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##DQ176850|PLCH2|9651|phospholipase C, eta 2##NM_014638|PLCH2|9651|phospholipase C, eta 2##BC144620|PLCH2|9651|phospholipase C, eta 2##AL442072|PANK4|55229|pantothenate kinase 4##BC043496|PANK4|55229|pantothenate kinase 4##AK001644|PANK4|55229|pantothenate kinase 4##AK223546|PANK4|55229|pantothenate kinase 4##AK303127|PANK4|55229|pantothenate kinase 4##AK309860|PANK4|55229|pantothenate kinase 4##NM_018216|PANK4|55229|pantothenate kinase 4##AK295301|PANK4|55229|pantothenate kinase 4##BC087840|HES5|388585|hairy and enhancer of split 5 (Drosophila)##DQ272660|HES5|388585|hairy and enhancer of split 5 (Drosophila)##NM_001010926|HES5|388585|hairy and enhancer of split 5 (Drosophila)	0.998495	CTCF.p2:-6:0.998
chr18	47385208	47385347	reg1001615.p1	16.416	+	TSC_hg19_v1_chr18_-_47376221 BC033527	-9088	-	TSC_hg19_v1_chr18_+_47340396 AK123464	-44886	+	TSC_hg19_v1_chr18_-_47340253 AK054673 NM_006111 AK314462	-45007	-	AB384567 AB032945 TSC_hg19_v1_chr18_-_47721518 AB290160 BC032511 NM_001080467	336095	-	AB527886 BC030606 NM_145020 AK302114	407555	-	AF078830 AF078831 AF078832 AF078833 EF488685 AB527669 NM_001204151	421096	-	BC033527|MYO5B|4645|myosin VB##AK054673|ACAA2|10449|acetyl-CoA acyltransferase 2##NM_006111|ACAA2|10449|acetyl-CoA acyltransferase 2##AK314462|ACAA2|10449|acetyl-CoA acyltransferase 2##AB032945|MYO5B|4645|myosin VB##AB290160|MYO5B|4645|myosin VB##BC032511|MYO5B|4645|myosin VB##NM_001080467|MYO5B|4645|myosin VB##BC030606|CCDC11|220136|coiled-coil domain containing 11##NM_145020|CCDC11|220136|coiled-coil domain containing 11##AK302114|CCDC11|220136|coiled-coil domain containing 11##AF078830|MBD1|4152|methyl-CpG binding domain protein 1##AF078831|MBD1|4152|methyl-CpG binding domain protein 1##AF078832|MBD1|4152|methyl-CpG binding domain protein 1##AF078833|MBD1|4152|methyl-CpG binding domain protein 1##EF488685|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204151|MBD1|4152|methyl-CpG binding domain protein 1	0.962805	CTCF.p2:16:0.919
chr1	33761202	33761326	reg1001110.p1	16.413	+	TSC_hg19_v1_chr1_+_33722167 NM_152493	-39099	+	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	-113616	-	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	-214531	+	TSC_hg19_v1_chr1_-_33813262 AK055807	52032	-	BC029269 TSC_hg19_v1_chr1_-_33815374 BC068573 BC092492 BC110863	54105	-	AK128821 TSC_hg19_v1_chr1_-_33815496 BC028396 BC018602	54189	-	NM_152493|ZNF362|149076|zinc finger protein 362##AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##BC029269|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC068573|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC092492|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC110863|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AK128821|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC028396|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC018602|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	0.998483	CTCF.p2:3:0.998
chr11	75514420	75514528	reg1000826.p1	16.412	+	TSC_hg19_v1_chr11_+_75479822 AB048286 AY780646 AY358532 AL834287 AF384161 CU677247 AY780647	-34551	+	TSC_hg19_v1_chr11_+_75479774 NM_032564 BC015234	-34697	+	AK026297 AK291998 AY157608 BC103876 BC103877 BC103878 NM_025098	-85576	+	NM_003369 TSC_hg19_v1_chr11_+_75526233 AK291011	11748	+	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	11804	+	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	403038	-	AB048286|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY358532|DGAT2|84649|diacylglycerol O-acyltransferase 2##AL834287|DGAT2|84649|diacylglycerol O-acyltransferase 2##AF384161|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY780647|DGAT2|84649|diacylglycerol O-acyltransferase 2##NM_032564|DGAT2|84649|diacylglycerol O-acyltransferase 2##BC015234|DGAT2|84649|diacylglycerol O-acyltransferase 2##AK026297|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##AK291998|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##AY157608|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103876|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103877|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103878|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##NM_025098|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##NM_003369|UVRAG|7405|UV radiation resistance associated gene##AK291011|UVRAG|7405|UV radiation resistance associated gene##BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11	0.99899	CTCF.p2:-9:0.999
chr16	46887976	46888116	reg1001587.p1	16.411	+	TSC_hg19_v1_chr16_-_46865090 CU691166 BC056676 BX647945 NM_001001436	-22958	-	AB451455 BC109096 BC109097 AJ247087 NM_182493	-105884	-	AF139658 TSC_hg19_v1_chr16_+_46723600 BC039032 BC063565 AK310633 AK021946 AB528212 AM392646 AM392910 AM393245 AM393680 AM393794 CU687764	-164449	+	TSC_hg19_v1_chr16_+_46918291 AY029173 NM_133443 BC062555	30235	+	NM_001142466 AK094971	31056	+	TSC_hg19_v1_chr16_-_47005340 Y13350	117302	-	BC056676|C16orf87|388272|chromosome 16 open reading frame 87##BX647945|C16orf87|388272|chromosome 16 open reading frame 87##NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87##AB451455|MYLK3|91807|myosin light chain kinase 3##BC109096|MYLK3|91807|myosin light chain kinase 3##BC109097|MYLK3|91807|myosin light chain kinase 3##AJ247087|MYLK3|91807|myosin light chain kinase 3##NM_182493|MYLK3|91807|myosin light chain kinase 3##AF139658|ORC6|23594|origin recognition complex, subunit 6##BC039032|ORC6|23594|origin recognition complex, subunit 6##BC063565|ORC6|23594|origin recognition complex, subunit 6##AK310633|ORC6|23594|origin recognition complex, subunit 6##AK021946|ORC6|23594|origin recognition complex, subunit 6##AM392646|ORC6|23594|origin recognition complex, subunit 6##AM392910|ORC6|23594|origin recognition complex, subunit 6##AM393245|PPA2|27068|pyrophosphatase (inorganic) 2##AM393680|ORC6|23594|origin recognition complex, subunit 6##AM393794|PPA2|27068|pyrophosphatase (inorganic) 2##AY029173|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##NM_133443|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##BC062555|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##NM_001142466|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##AK094971|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2	0.034354	
chr16	46588394	46588511	reg1001795.p1	16.409	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-13326319	+	AL133588 NM_016212	-13326938	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-13382854	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	66820	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	66854	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	134610	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.841383	CTCF.p2:-4:0.830
chr19	47260679	47260814	reg1001583.p1	16.408	+	TSC_hg19_v1_chr19_-_47249708 NM_001039877 NM_013403	-11033	-	TSC_hg19_v1_chr19_-_47249688 AF212940 AB527410 BC034604	-11052	-	BC014278 AB209003 TSC_hg19_v1_chr19_-_47249674	-11091	-	TSC_hg19_v1_chr19_-_47288122 AK316546 AK299137 NM_001145145 AK055630	27354	-	AK293433 AK301661 NM_001145144	29796	-	AF334818 GQ919058 AB527629 CU674018 DQ892148 DQ895345 AF102826 TSC_hg19_v1_chr19_-_47291260 BC000062 AK125222	30527	-	NM_001039877|STRN4|29888|striatin, calmodulin binding protein 4##NM_013403|STRN4|29888|striatin, calmodulin binding protein 4##AF212940|STRN4|29888|striatin, calmodulin binding protein 4##BC034604|STRN4|29888|striatin, calmodulin binding protein 4##BC014278|STRN4|29888|striatin, calmodulin binding protein 4##AB209003|STRN4|29888|striatin, calmodulin binding protein 4##AK316546|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK299137|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145145|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK055630|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK293433|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK301661|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145144|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF334818|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##GQ919058|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ892148|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ895345|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF102826|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC000062|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK125222|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5	0.99552	CTCF.p2:-8:0.996
chr1	167028488	167028621	reg1001573.p1	16.407	+	TSC_hg19_v1_chr1_+_166958503 AK302253 AK131066 DQ076156 GU383113 AK027810 NM_032858 BC028595 AB590622 CU688524	-70012	+	TSC_hg19_v1_chr1_+_166944753 GU383114	-83770	+	AB527117 AF503509 NM_199351 TSC_hg19_v1_chr1_-_166944658	-83872	-	CU687006 BC074830 BC074876 TSC_hg19_v1_chr1_-_167059615 BC107164 BC107165 AK312833 BC069705 BC069723 BC069745 BC069761 BC069789 NM_005814 U79725	31141	-	NM_001080426	35532	+	TSC_hg19_v1_chr1_+_167190127 NM_001198786 NM_002697 AK302525 AK303201 AK308004 AK091438 S66901 BC052274 X13403	161503	+	AK302253|MAEL|84944|maelstrom homolog (Drosophila)##AK131066|MAEL|84944|maelstrom homolog (Drosophila)##DQ076156|MAEL|84944|maelstrom homolog (Drosophila)##GU383113|MAEL|84944|maelstrom homolog (Drosophila)##AK027810|MAEL|84944|maelstrom homolog (Drosophila)##NM_032858|MAEL|84944|maelstrom homolog (Drosophila)##BC028595|MAEL|84944|maelstrom homolog (Drosophila)##GU383114|MAEL|84944|maelstrom homolog (Drosophila)##AF503509|ILDR2|387597|immunoglobulin-like domain containing receptor 2##NM_199351|ILDR2|387597|immunoglobulin-like domain containing receptor 2##BC074830|GPA33|10223|glycoprotein A33 (transmembrane)##BC074876|GPA33|10223|glycoprotein A33 (transmembrane)##BC107164|GPA33|10223|glycoprotein A33 (transmembrane)##BC107165|GPA33|10223|glycoprotein A33 (transmembrane)##AK312833|GPA33|10223|glycoprotein A33 (transmembrane)##BC069705|GPA33|10223|glycoprotein A33 (transmembrane)##BC069723|GPA33|10223|glycoprotein A33 (transmembrane)##BC069745|GPA33|10223|glycoprotein A33 (transmembrane)##BC069761|GPA33|10223|glycoprotein A33 (transmembrane)##BC069789|GPA33|10223|glycoprotein A33 (transmembrane)##NM_005814|GPA33|10223|glycoprotein A33 (transmembrane)##U79725|GPA33|10223|glycoprotein A33 (transmembrane)##NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)##NM_001198786|POU2F1|5451|POU class 2 homeobox 1##NM_002697|POU2F1|5451|POU class 2 homeobox 1##AK302525|POU2F1|5451|POU class 2 homeobox 1##AK303201|POU2F1|5451|POU class 2 homeobox 1##AK308004|POU2F1|5451|POU class 2 homeobox 1##AK091438|POU2F1|5451|POU class 2 homeobox 1##BC052274|POU2F1|5451|POU class 2 homeobox 1##X13403|POU2F1|5451|POU class 2 homeobox 1	0.974371	CTCF.p2:15:0.974
chr8	11325200	11325337	reg1001568.p3	16.407	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-1039	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-120264	-	AJ291677 NM_054028 BC131696	-136758	+	S76617 NM_001715 BC018703 BC004473 BC038555	26325	+	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	236452	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	302000	+	AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##AJ291677|SLC35G5|83650|solute carrier family 35, member G5##NM_054028|SLC35G5|83650|solute carrier family 35, member G5##BC131696|SLC35G5|83650|solute carrier family 35, member G5##S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)	0.985887	CTCF.p2:0:0.986
chr1	120218297	120218430	reg1001675.p1	16.404	+	NM_001080470	-27974	-	NM_000862 S45679 AK291556 BC031999 M35493 X53321 M27137 DQ891161 DQ894342 CU689258 X55997	-168401	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	-260602	+	NM_006623 AK315360 BC011262 TSC_hg19_v1_chr1_+_120254558 AK309662 AK310132 AF171237 BC000303 BC001349 BC023235 DQ892073 EU176546 AB528378 CR456795	36168	+	CR456850 BC044217 X83618 AK301594 AK313590 TSC_hg19_v1_chr1_-_120311529 AK302276 AK303777 NM_001166107 NM_005518	93147	-	AY007243 AF345934 BC017089 TSC_hg19_v1_chr1_-_120354084 AF254415 AY126670 AY126671 AY126672 NM_001159352 NM_001159353 NM_032044	135767	-	NM_001080470|ZNF697|90874|zinc finger protein 697##NM_000862|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##S45679|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##AK291556|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##BC031999|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M35493|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X53321|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M27137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ891161|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ894342|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X55997|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase##AK315360|PHGDH|26227|phosphoglycerate dehydrogenase##BC011262|PHGDH|26227|phosphoglycerate dehydrogenase##AK309662|PHGDH|26227|phosphoglycerate dehydrogenase##AK310132|PHGDH|26227|phosphoglycerate dehydrogenase##AF171237|PHGDH|26227|phosphoglycerate dehydrogenase##BC000303|PHGDH|26227|phosphoglycerate dehydrogenase##BC001349|PHGDH|26227|phosphoglycerate dehydrogenase##BC023235|PHGDH|26227|phosphoglycerate dehydrogenase##DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase##EU176546|PHGDH|26227|phosphoglycerate dehydrogenase##CR456795|PHGDH|26227|phosphoglycerate dehydrogenase##CR456850|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##BC044217|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##X83618|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK301594|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK313590|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK302276|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK303777|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_001166107|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_005518|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AY007243|REG4|83998|regenerating islet-derived family, member 4##AF345934|REG4|83998|regenerating islet-derived family, member 4##BC017089|REG4|83998|regenerating islet-derived family, member 4##AF254415|REG4|83998|regenerating islet-derived family, member 4##AY126670|REG4|83998|regenerating islet-derived family, member 4##AY126671|REG4|83998|regenerating islet-derived family, member 4##AY126672|REG4|83998|regenerating islet-derived family, member 4##NM_001159352|REG4|83998|regenerating islet-derived family, member 4##NM_001159353|REG4|83998|regenerating islet-derived family, member 4##NM_032044|REG4|83998|regenerating islet-derived family, member 4	0.999564	CTCF.p2:1:1.000
chr3	137837859	137837983	reg1001525.p1	16.403	+	BC033308 NM_173543 TSC_hg19_v1_chr3_-_137834481	-3446	-	AK057406 NM_001170538	-5600	-	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	-108918	+	BC119639 BC119640 AF141315 AK225668 NM_016161	13254	-	DQ895420 EU176332 TSC_hg19_v1_chr3_-_137893704	55751	-	BC009472 TSC_hg19_v1_chr3_-_137893737 AK094147	55808	-	BC033308|DZIP1L|199221|DAZ interacting protein 1-like##NM_173543|DZIP1L|199221|DAZ interacting protein 1-like##AK057406|DZIP1L|199221|DAZ interacting protein 1-like##NM_001170538|DZIP1L|199221|DAZ interacting protein 1-like##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18##BC119639|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##BC119640|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##AF141315|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##AK225668|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##NM_016161|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##DQ895420|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##EU176332|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##BC009472|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##AK094147|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)	0.962524	CTCF.p2:-6:0.963
chr17	38459384	38459514	reg1001441.p1	16.400	+	TSC_hg19_v1_chr17_+_38444176 BC025232 AF022109	-15235	+	TSC_hg19_v1_chr17_+_38444134 NM_001254 U77949	-15309	+	AK313620 TSC_hg19_v1_chr17_+_38444130	-15319	+	NM_000964 BC008727 AK312564	5985	+	NM_001145301 NM_001145302 TSC_hg19_v1_chr17_+_38474476	15031	+	TSC_hg19_v1_chr17_+_38474521 AK292205 FJ487576	15075	+	BC025232|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##AF022109|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##NM_001254|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##U77949|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##AK313620|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##NM_000964|RARA|5914|retinoic acid receptor, alpha##BC008727|RARA|5914|retinoic acid receptor, alpha##AK312564|RARA|5914|retinoic acid receptor, alpha##NM_001145301|RARA|5914|retinoic acid receptor, alpha##NM_001145302|RARA|5914|retinoic acid receptor, alpha##AK292205|RARA|5914|retinoic acid receptor, alpha##FJ487576|RARA|5914|retinoic acid receptor, alpha	0.98498	CTCF.p2:-14:0.985
chr1	41239976	41240101	reg1001601.p1	16.397	+	AF191744 AB385526 BT020081 U62296 TSC_hg19_v1_chr1_+_41204591	-35488	+	TSC_hg19_v1_chr1_-_41157737 AK094323	-82315	-	TSC_hg19_v1_chr1_+_41157659 NM_001142590 AK127677	-82371	+	TSC_hg19_v1_chr1_+_41249485 AF105202 NM_004700 NM_172163	9543	+	TSC_hg19_v1_chr1_+_41284599 AK074957	44579	+	TSC_hg19_v1_chr1_-_41328006 BC052559 NM_133467	87971	-	AF191744|NFYC|4802|nuclear transcription factor Y, gamma##BT020081|NFYC|4802|nuclear transcription factor Y, gamma##U62296|NFYC|4802|nuclear transcription factor Y, gamma##AK094323|LOC100130557|100130557|uncharacterized LOC100130557##NM_001142590|NFYC|4802|nuclear transcription factor Y, gamma##AK127677|NFYC|4802|nuclear transcription factor Y, gamma##AF105202|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_004700|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_172163|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##AK074957|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##BC052559|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##NM_133467|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	0.999234	CTCF.p2:-1:0.999
chr15	77835789	77835944	reg1001874.p1	16.393	+	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-122604	+	TSC_hg19_v1_chr15_+_77713043 AK297449 AK311376	-122835	+	TSC_hg19_v1_chr15_-_77712437 NM_024776	-123323	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	88833	-	TSC_hg19_v1_chr15_-_77924732 AK291363	88914	-	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	534087	-	AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AK297449|HMG20A|10363|high mobility group 20A##NM_024776|PEAK1|79834|NKF3 kinase family member##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B	1.609407	CTCF.p2:-6:0.992	CTCF.p2:-59:0.617
chr9	100361087	100361205	reg1000809.p1	16.392	+	TSC_hg19_v1_chr9_+_100263947 BC002660 NM_003275	-97208	+	NM_001166116 AK314533	-97684	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	-186767	+	TSC_hg19_v1_chr9_-_100395642 AK094043 AK291199 AX748426 BC035604 BX648493 BX538308 AK128615	34483	-	NM_002486 AK312807 TSC_hg19_v1_chr9_+_100395897 D32002	34680	+	NM_139246	34815	-	BC002660|TMOD1|7111|tropomodulin 1##NM_003275|TMOD1|7111|tropomodulin 1##NM_001166116|TMOD1|7111|tropomodulin 1##AK314533|TMOD1|7111|tropomodulin 1##AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7##AK094043|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK291199|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BC035604|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX648493|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX538308|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK128615|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##NM_002486|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##AK312807|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##D32002|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##NM_139246|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2	0.996559	CTCF.p2:8:0.997
chr2	75836320	75836456	reg1001836.p1	16.390	+	AK023453 NM_032181	-39541	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	-48298	-	BC016157 TSC_hg19_v1_chr2_-_75788066	-48341	-	TSC_hg19_v1_chr2_+_75873908 NM_014763 AK295578 AK291250 BC030144 CU688824 AB463123 BC021051 D14660 DQ892303 DQ895502	37550	+	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	101331	-	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	101663	-	AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_014763|MRPL19|9801|mitochondrial ribosomal protein L19##AK295578|MRPL19|9801|mitochondrial ribosomal protein L19##AK291250|MRPL19|9801|mitochondrial ribosomal protein L19##BC030144|MRPL19|9801|mitochondrial ribosomal protein L19##BC021051|MRPL19|9801|mitochondrial ribosomal protein L19##D14660|MRPL19|9801|mitochondrial ribosomal protein L19##DQ892303|MRPL19|9801|mitochondrial ribosomal protein L19##DQ895502|MRPL19|9801|mitochondrial ribosomal protein L19##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2	0.385893	CTCF.p2:9:0.375
chr22	26169022	26169155	reg1001865.p1	16.389	+	TSC_hg19_v1_chr22_+_26138168 AY077700	-30904	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	-30968	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-208142	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	396349	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	396409	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	396575	+	AY077700|MYO18B|84700|myosin XVIIIB##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.97594	CTCF.p2:8:0.976
chr14	65231580	65231690	reg1000788.p1	16.388	+	TSC_hg19_v1_chr14_+_65171243 BC129952 BC129953	-60357	+	TSC_hg19_v1_chr14_+_65171178 BX248779 NM_015549	-60463	+	TSC_hg19_v1_chr14_+_65016678 AK058044 NM_172365 BC068989	-214990	+	AB384944 BC136284 BC136285 NM_000347 NM_001024858	58203	-	J05500 AB209415 TSC_hg19_v1_chr14_-_65346722	115008	-	NM_001202558 NM_001202559 NM_001204063 NM_001204064 NM_145165 BC020550 TSC_hg19_v1_chr14_+_65381175 AK315905 AF060510 AK057626	149492	+	BC129952|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BC129953|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BX248779|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##NM_015549|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##AK058044|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##NM_172365|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##BC068989|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##BC136284|SPTB|6710|spectrin, beta, erythrocytic##BC136285|SPTB|6710|spectrin, beta, erythrocytic##NM_000347|SPTB|6710|spectrin, beta, erythrocytic##NM_001024858|SPTB|6710|spectrin, beta, erythrocytic##J05500|SPTB|6710|spectrin, beta, erythrocytic##AB209415|SPTB|6710|spectrin, beta, erythrocytic##NM_001202558|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##NM_001202559|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##NM_001204063|CHURC1|91612|churchill domain containing 1##NM_001204064|CHURC1|91612|churchill domain containing 1##NM_145165|CHURC1|91612|churchill domain containing 1##BC020550|CHURC1|91612|churchill domain containing 1##AK315905|CHURC1|91612|churchill domain containing 1##AF060510|CHURC1|91612|churchill domain containing 1##AK057626|CHURC1|91612|churchill domain containing 1	0.999469	CTCF.p2:33:0.999
chr9	98980542	98980690	reg1001337.p1	16.388	+	TSC_hg19_v1_chr9_-_98638262 AF194971 AL389954	-342293	-	NM_001010895 TSC_hg19_v1_chr9_+_98637942 AK129624 AK308409 AL389953	-342675	+	TSC_hg19_v1_chr9_-_98637839 AK092137 AX747374	-342763	-	BT019371 CR541894 CU689848 DQ891812 DQ894995 BC034281 NM_000197 U05659	83793	-	TSC_hg19_v1_chr9_-_99145966 HQ258608 AB106537 AB122077 AK307890 BC100278	165315	-	NM_007001 TSC_hg19_v1_chr9_-_99145994 BC113579	165404	-	AF194971|LINC00476|100128782|long intergenic non-protein coding RNA 476##AL389954|LINC00476|100128782|long intergenic non-protein coding RNA 476##NM_001010895|C9orf102|375748|chromosome 9 open reading frame 102##AK308409|C9orf102|375748|chromosome 9 open reading frame 102##AL389953|C9orf102|375748|chromosome 9 open reading frame 102##AK092137|LINC00476|100128782|long intergenic non-protein coding RNA 476##BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##HQ258608|SLC35D2|11046|solute carrier family 35, member D2##AB106537|SLC35D2|11046|solute carrier family 35, member D2##AB122077|SLC35D2|11046|solute carrier family 35, member D2##AK307890|SLC35D2|11046|solute carrier family 35, member D2##BC100278|SLC35D2|11046|solute carrier family 35, member D2##NM_007001|SLC35D2|11046|solute carrier family 35, member D2##BC113579|SLC35D2|11046|solute carrier family 35, member D2	0.999343	CTCF.p2:3:0.999
chr17	66259345	66259478	reg1000984.p1	16.387	+	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	-4077	+	TSC_hg19_v1_chr17_+_66244233 AF208856	-15168	+	NM_001033569 NM_001033570 NM_001033571 NM_001033572 NM_001033574 NM_016627 TSC_hg19_v1_chr17_+_66244216 BC056271 BC050709	-15231	+	AX750577 AX750581 U79745 AK313121 AK290417 BC064832 NM_001174166 NM_004694	27919	-	AY691424 CU691786 TSC_hg19_v1_chr17_-_66453638 BC039867 AK301830 AK000917 NM_017983	194200	-	TSC_hg19_v1_chr17_+_66508140 NM_212471 Y07642	248712	+	AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G##NM_001033569|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033570|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033571|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033572|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033574|AMZ2|51321|archaelysin family metallopeptidase 2##NM_016627|AMZ2|51321|archaelysin family metallopeptidase 2##BC056271|AMZ2|51321|archaelysin family metallopeptidase 2##BC050709|AMZ2|51321|archaelysin family metallopeptidase 2##AX750581|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AY691424|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##BC039867|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK301830|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK000917|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_017983|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_212471|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##Y07642|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	0.099526	
chr20	4701440	4701566	reg1000961.p1	16.382	+	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	-34527	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	-471913	-	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	-571980	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	1031	+	AY154472 NM_170774	94265	-	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	102691	-	NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	0.134247	
chr20	36013210	36013339	reg1001503.p1	16.381	+	TSC_hg19_v1_chr20_+_36011960 BC011566	-1271	+	TSC_hg19_v1_chr20_+_35974513 NM_198291 Z18364	-38767	+	TSC_hg19_v1_chr20_+_35973086 AF272982 NM_005417	-40181	+	TSC_hg19_v1_chr20_-_36073959 D28405	60681	-	NM_005386 NM_181689 TSC_hg19_v1_chr20_+_36149651 AK312069 U25034 BC001768 U25033 AB002392 BT019426	136395	+	NM_001167823	139678	-	BC011566|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##AF272982|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005417|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005386|NNAT|4826|neuronatin##NM_181689|NNAT|4826|neuronatin##AK312069|NNAT|4826|neuronatin##U25034|NNAT|4826|neuronatin##BC001768|NNAT|4826|neuronatin##U25033|NNAT|4826|neuronatin##AB002392|NNAT|4826|neuronatin##BT019426|NNAT|4826|neuronatin##NM_001167823|BLCAP|10904|bladder cancer associated protein	0.994788	CTCF.p2:-10:0.995
chr2	3307488	3307613	reg1001340.p1	16.379	+	TSC_hg19_v1_chr2_-_2335085 AK307797	-972466	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	-972585	-	BC031690 TSC_hg19_v1_chr2_-_1946938	-1360644	-	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	74006	-	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	75955	+	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	215748	-	AK307797|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1	0.991618	CTCF.p2:8:0.992
chr6	137635545	137635677	reg1000911.p2	16.379	+	TSC_hg19_v1_chr6_-_137540556 NM_000416	-95053	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-95066	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	-95099	-	BC051352 AK096362 NM_175747	179914	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	552926	+	TSC_hg19_v1_chr6_-_138189314 AK124173	553739	-	NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3	0.998538	CTCF.p2:8:0.999
chr1	52362653	52362773	reg1001345.p1	16.378	+	TSC_hg19_v1_chr1_-_52344478 NM_001101662 NM_002525	-18193	-	TSC_hg19_v1_chr1_-_52344409 AK302616 AK312318 X93207 X93209	-18298	-	U64898 BC008775 TSC_hg19_v1_chr1_-_52344400	-18325	-	M28214 BC005035 TSC_hg19_v1_chr1_-_52456373 AK291653 NM_002867	93650	-	CU680254 DQ892239 DQ895439 BC012173 TSC_hg19_v1_chr1_-_52499463 AF327348 NM_138417 AK313746	136758	-	CU674738 BC008953 TSC_hg19_v1_chr1_-_52520864 AK075409 BC001493 BC008913 AY358982 AF131758	158115	-	NM_001101662|NRD1|4898|nardilysin (N-arginine dibasic convertase)##NM_002525|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AK302616|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AK312318|NRD1|4898|nardilysin (N-arginine dibasic convertase)##X93207|NRD1|4898|nardilysin (N-arginine dibasic convertase)##X93209|NRD1|4898|nardilysin (N-arginine dibasic convertase)##U64898|NRD1|4898|nardilysin (N-arginine dibasic convertase)##BC008775|NRD1|4898|nardilysin (N-arginine dibasic convertase)##M28214|RAB3B|5865|RAB3B, member RAS oncogene family##BC005035|RAB3B|5865|RAB3B, member RAS oncogene family##AK291653|RAB3B|5865|RAB3B, member RAS oncogene family##NM_002867|RAB3B|5865|RAB3B, member RAS oncogene family##DQ892239|KTI12|112970|KTI12 homolog, chromatin associated (S. cerevisiae)##DQ895439|KTI12|112970|KTI12 homolog, chromatin associated (S. cerevisiae)##BC012173|KTI12|112970|KTI12 homolog, chromatin associated (S. cerevisiae)##AF327348|KTI12|112970|KTI12 homolog, chromatin associated (S. cerevisiae)##NM_138417|KTI12|112970|KTI12 homolog, chromatin associated (S. cerevisiae)##AK313746|KTI12|112970|KTI12 homolog, chromatin associated (S. cerevisiae)##BC008953|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)##AK075409|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)##BC001493|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)##BC008913|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)##AY358982|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)##AF131758|TXNDC12|51060|thioredoxin domain containing 12 (endoplasmic reticulum)	0.519931	CTCF.p2:-3:0.520
chr17	3908021	3908152	reg1001178.p1	16.378	+	AB462957 DQ893317 EU176809 Z69881 TSC_hg19_v1_chr17_-_3867744 AF068220 BC035729 AK292716 NM_005173 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958	-40385	-	NM_002558	-88127	-	X83688 U45448 BC044657 BC027949 TSC_hg19_v1_chr17_-_3819762 AK310981 AK313264 AF020498	-88338	-	AB384472 TSC_hg19_v1_chr17_-_4046240	138129	-	TSC_hg19_v1_chr17_-_4046246 AB007859 BC151836 NM_015113	138166	-	TSC_hg19_v1_chr17_-_4046308 AK127482	138224	-	DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_002558|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##X83688|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##U45448|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC044657|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC027949|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AK313264|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AF020498|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	0.991036	CTCF.p2:11:0.991
chrX	118863988	118864103	reg1000855.p1	16.378	+	AY034177 AF403058 AF403059 AF403060 AF403061 AF403062 AY679521 NM_015129 NM_145799 NM_145800 NM_145802 TSC_hg19_v1_chrX_-_118827360 AK290977	-36694	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	-36866	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	-36913	-	TSC_hg19_v1_chrX_+_118892553 NM_001105576	28536	+	U57846 AK098280 BC001019 D79205 TSC_hg19_v1_chrX_-_118925592 BC070205 D28397 NM_001000	61539	-	TSC_hg19_v1_chrX_-_118986969 AF318576 AK093728 AX748280 BC121017 BC121018 AY013251 BC008494 NM_023010 NM_080632	122906	-	AY034177|SEPT6|23157|septin 6##AF403058|SEPT6|23157|septin 6##AF403059|SEPT6|23157|septin 6##AF403060|SEPT6|23157|septin 6##AF403061|SEPT6|23157|septin 6##AF403062|SEPT6|23157|septin 6##AY679521|SEPT6|23157|septin 6##NM_015129|SEPT6|23157|septin 6##NM_145799|SEPT6|23157|septin 6##NM_145800|SEPT6|23157|septin 6##NM_145802|SEPT6|23157|septin 6##AK290977|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##NM_001105576|ANKRD58|347454|ankyrin repeat domain 58##U57846|RPL39|6170|ribosomal protein L39##BC001019|RPL39|6170|ribosomal protein L39##D79205|RPL39|6170|ribosomal protein L39##BC070205|RPL39|6170|ribosomal protein L39##D28397|RPL39|6170|ribosomal protein L39##NM_001000|RPL39|6170|ribosomal protein L39##AF318576|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##AK093728|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC121017|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC121018|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##AY013251|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC008494|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##NM_023010|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##NM_080632|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)	0.957008	CTCF.p2:26:0.957
chr9	101903105	101903227	reg1001053.p1	16.377	+	TSC_hg19_v1_chr9_+_101867472 AB384823 EF142853 EF142854	-35687	+	TSC_hg19_v1_chr9_+_101867401 AJ619019 L11695 NM_001130916 NM_004612	-35758	+	BC071181 TSC_hg19_v1_chr9_+_101867394	-35773	+	CU676096 DQ891989 DQ895179 TSC_hg19_v1_chr9_-_101984197 BC017876 AK027417 AK074704 AB161356	81026	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	81051	-	TSC_hg19_v1_chr9_-_101984233 NM_033087	81077	-	AJ619019|TGFBR1|7046|transforming growth factor, beta receptor 1##L11695|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_001130916|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_004612|TGFBR1|7046|transforming growth factor, beta receptor 1##BC071181|TGFBR1|7046|transforming growth factor, beta receptor 1##DQ891989|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##DQ895179|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##BC017876|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK027417|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074704|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AB161356|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)	0.966739	CTCF.p2:20:0.967
chr10	73571825	73571948	reg1000981.p1	16.376	+	AY563161 AY563162 NM_001171935 NM_001171936	-247	+	AY563165 AY563166 NM_001171933 NM_001171934	-16359	+	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	-38580	-	TSC_hg19_v1_chr10_-_73611004 BT006849 CR456746 CU678650 DQ893009 DQ896255 M60255 M60257 M60258 AB527305 BC001503 J03015 M32221 D00422 M81355 AB209776 BC004275 BC007612	39095	-	AK223290 AK293672 AK307721 TSC_hg19_v1_chr10_-_73611007 AK129790 J03077 AK057878 BC091483	39131	-	AK299184 TSC_hg19_v1_chr10_-_73611043	39157	-	AY563161|CDH23|64072|cadherin-related 23##AY563162|CDH23|64072|cadherin-related 23##NM_001171935|CDH23|64072|cadherin-related 23##NM_001171936|CDH23|64072|cadherin-related 23##AY563165|CDH23|64072|cadherin-related 23##AY563166|CDH23|64072|cadherin-related 23##NM_001171933|CDH23|64072|cadherin-related 23##NM_001171934|CDH23|64072|cadherin-related 23##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54##BT006849|PSAP|5660|prosaposin##CR456746|PSAP|5660|prosaposin##DQ893009|PSAP|5660|prosaposin##DQ896255|PSAP|5660|prosaposin##M60255|PSAP|5660|prosaposin##M60257|PSAP|5660|prosaposin##M60258|PSAP|5660|prosaposin##BC001503|PSAP|5660|prosaposin##J03015|PSAP|5660|prosaposin##M32221|PSAP|5660|prosaposin##D00422|PSAP|5660|prosaposin##M81355|PSAP|5660|prosaposin##AB209776|PSAP|5660|prosaposin##BC004275|PSAP|5660|prosaposin##BC007612|PSAP|5660|prosaposin##AK223290|PSAP|5660|prosaposin##AK293672|PSAP|5660|prosaposin##AK307721|PSAP|5660|prosaposin##AK129790|PSAP|5660|prosaposin##J03077|PSAP|5660|prosaposin##AK057878|PSAP|5660|prosaposin##BC091483|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin	0.998796	CTCF.p2:3:0.999
chr17	27907453	27907590	reg1001720.p1	16.373	+	BC001593 NM_138349 TSC_hg19_v1_chr17_+_27895738	-11783	+	TSC_hg19_v1_chr17_+_27895730 AB110209 AK075341	-11814	+	TSC_hg19_v1_chr17_-_27894056 BC012476 NM_198147 AY358212	-13497	-	AB384970 AF124490 AB209537 AK299932 TSC_hg19_v1_chr17_-_27916543	8949	-	TSC_hg19_v1_chr17_-_27916606 BC067358 NM_001085454 NM_014030	9085	-	TSC_hg19_v1_chr17_-_27916646 AK294785 BC048196	9134	-	BC001593|TP53I13|90313|tumor protein p53 inducible protein 13##NM_138349|TP53I13|90313|tumor protein p53 inducible protein 13##AB110209|TP53I13|90313|tumor protein p53 inducible protein 13##AK075341|TP53I13|90313|tumor protein p53 inducible protein 13##BC012476|ABHD15|116236|abhydrolase domain containing 15##NM_198147|ABHD15|116236|abhydrolase domain containing 15##AY358212|ABHD15|116236|abhydrolase domain containing 15##AF124490|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AB209537|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AK299932|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC067358|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_001085454|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_014030|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AK294785|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC048196|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1	0.999966	CTCF.p2:-12:1.000
chr14	77534691	77534831	reg1001780.p1	16.370	+	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-39701	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	-40077	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-241966	+	AK124327 TSC_hg19_v1_chr14_-_77542533	7772	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	29884	+	BC117676 TSC_hg19_v1_chr14_-_77608072	73254	-	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22	0.909507	CTCF.p2:7:0.910
chr12	6172431	6172554	reg1001676.p1	16.369	+	AJ272204 NM_020373	-117095	-	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	-118018	-	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	-569154	+	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	61267	-	TSC_hg19_v1_chr12_+_6309565 NM_001769 AK315219 AK308700 AK296332 AK309527 AY966455 X60111 AK296894 AK298431 BC011988 M38690 AY423720 DQ891314 DQ894498 AB590218 CU680148 L34068	137078	+	AK001527 NM_018173 BC104751 BC105961 BC109095	247141	+	AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor##NM_001769|CD9|928|CD9 molecule##AK315219|CD9|928|CD9 molecule##AK308700|CD9|928|CD9 molecule##AK296332|CD9|928|CD9 molecule##AK309527|CD9|928|CD9 molecule##AY966455|CD9|928|CD9 molecule##X60111|CD9|928|CD9 molecule##AK296894|CD9|928|CD9 molecule##AK298431|CD9|928|CD9 molecule##BC011988|CD9|928|CD9 molecule##M38690|CD9|928|CD9 molecule##AY423720|CD9|928|CD9 molecule##DQ891314|CD9|928|CD9 molecule##DQ894498|CD9|928|CD9 molecule##L34068|CD9|928|CD9 molecule##AK001527|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_018173|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC104751|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC105961|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC109095|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6	0.66103	CTCF.p2:-9:0.661
chr13	27936235	27936363	reg1001523.p1	16.368	+	TSC_hg19_v1_chr13_+_27844966 HQ258126	-91292	+	AY439004 NM_206827	-91836	+	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	-110557	+	BC143711 D32257 NM_002097 TSC_hg19_v1_chr13_+_27998761 AB590496 U14134 U20272	62472	+	TSC_hg19_v1_chr13_-_28024327 BC039599 NM_001166262 NM_001166261	88010	-	AF265440 TSC_hg19_v1_chr13_-_28024702 BC046166 NM_001166263 NM_152912	88423	-	HQ258126|RASL11A|387496|RAS-like, family 11, member A##AY439004|RASL11A|387496|RAS-like, family 11, member A##NM_206827|RASL11A|387496|RAS-like, family 11, member A##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21##BC143711|GTF3A|2971|general transcription factor IIIA##D32257|GTF3A|2971|general transcription factor IIIA##NM_002097|GTF3A|2971|general transcription factor IIIA##U14134|GTF3A|2971|general transcription factor IIIA##U20272|GTF3A|2971|general transcription factor IIIA##BC039599|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166262|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166261|MTIF3|219402|mitochondrial translational initiation factor 3##BC046166|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166263|MTIF3|219402|mitochondrial translational initiation factor 3##NM_152912|MTIF3|219402|mitochondrial translational initiation factor 3	0.99992	CTCF.p2:-7:1.000
chr1	184774847	184774977	reg1001251.p1	16.366	+	TSC_hg19_v1_chr1_-_184724031 NM_025191	-50881	-	AK023095 TSC_hg19_v1_chr1_-_184724001	-50908	-	AK225171 TSC_hg19_v1_chr1_-_184723985 AK315118	-50928	-	BC018532 AK022527 AY550972 TSC_hg19_v1_chr1_-_184943641 BC030531 AK310557 AK311019 AK127373 AB050477	168677	-	TSC_hg19_v1_chr1_-_184943680 AF288391 NM_052966	168777	-	TSC_hg19_v1_chr1_+_185014449 NM_007212 AF141327	239591	+	NM_025191|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK023095|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK225171|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK315118|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC018532|FAM129A|116496|family with sequence similarity 129, member A##AK022527|FAM129A|116496|family with sequence similarity 129, member A##AY550972|FAM129A|116496|family with sequence similarity 129, member A##BC030531|FAM129A|116496|family with sequence similarity 129, member A##AK310557|FAM129A|116496|family with sequence similarity 129, member A##AK311019|FAM129A|116496|family with sequence similarity 129, member A##AB050477|FAM129A|116496|family with sequence similarity 129, member A##AF288391|FAM129A|116496|family with sequence similarity 129, member A##NM_052966|FAM129A|116496|family with sequence similarity 129, member A##NM_007212|RNF2|6045|ring finger protein 2##AF141327|RNF2|6045|ring finger protein 2	0.995395	CTCF.p2:-18:0.995
chr4	40721149	40721287	reg1001379.p1	16.366	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-88511	-	TSC_hg19_v1_chr4_-_40631882 BC034402 BC071585 NM_001098634	-89353	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	-203260	-	BC042401 NM_024677 BC036568 AK024063	30728	+	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	137957	-	BC088372 TSC_hg19_v1_chr4_-_40936716	215460	-	AK304206|RBM47|54502|RNA binding motif protein 47##BC034402|RBM47|54502|RNA binding motif protein 47##BC071585|RBM47|54502|RNA binding motif protein 47##NM_001098634|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	0.041251	
chr12	69964700	69964829	reg1001627.p1	16.365	+	TSC_hg19_v1_chr12_+_69864170 NM_001042555 NM_006654 BC021562 AK312477	-100622	+	TSC_hg19_v1_chr12_+_69753535 NM_006530 U61384 AJ245746 BC000994 AK001413 AB464359 EU446926	-211158	+	TSC_hg19_v1_chr12_+_69742163 AK310930 AK311779 J03801 FJ795023 BC004147 M21119 M19045 AB463851 DQ892271 DQ895472 U25677	-222555	+	TSC_hg19_v1_chr12_+_69979238 NM_006431 AK290767 BC113514 BC113516 AK297685 AF026166	14460	+	AF026293 TSC_hg19_v1_chr12_+_69979275	14513	+	AK294307 AK316408 NM_001198842 AK316397 AK302157	14785	+	NM_001042555|FRS2|10818|fibroblast growth factor receptor substrate 2##NM_006654|FRS2|10818|fibroblast growth factor receptor substrate 2##BC021562|FRS2|10818|fibroblast growth factor receptor substrate 2##AK312477|FRS2|10818|fibroblast growth factor receptor substrate 2##NM_006530|YEATS4|8089|YEATS domain containing 4##U61384|YEATS4|8089|YEATS domain containing 4##AJ245746|YEATS4|8089|YEATS domain containing 4##BC000994|YEATS4|8089|YEATS domain containing 4##AK001413|YEATS4|8089|YEATS domain containing 4##EU446926|YEATS4|8089|YEATS domain containing 4##AK311779|LYZ|4069|lysozyme##J03801|LYZ|4069|lysozyme##FJ795023|LYZ|4069|lysozyme##BC004147|LYZ|4069|lysozyme##M21119|LYZ|4069|lysozyme##M19045|LYZ|4069|lysozyme##DQ892271|LYZ|4069|lysozyme##DQ895472|LYZ|4069|lysozyme##U25677|LYZ|4069|lysozyme##NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	0.855692	CTCF.p2:11:0.856
chr15	53027781	53027936	reg1001698.p1	16.365	+	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	-56977	-	TSC_hg19_v1_chr15_-_52861344 BC100015 AL833077	-166481	-	TSC_hg19_v1_chr15_-_52861228 AF084555 BC003418 NM_006628	-166626	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	54336	-	AK096055 BX537884 NM_182758	1023989	-	NM_001080534	1277242	+	AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##BC100015|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AL833077|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AF084555|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC003418|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##NM_006628|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)	0.999887	CTCF.p2:15:1.000
chr11_gl000202_random	16378	16492	reg1000726.p1	16.360	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.99782	CTCF.p2:7:0.998
chr7	105697522	105697621	reg1000856.p2	16.360	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	-93873	+	TSC_hg19_v1_chr7_+_105517250 AK125261	-180307	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	-180586	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	55110	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	55173	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	55444	-	NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3##AK125261|CDHR3|222256|cadherin-related family member 3##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##X61382|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1	0.342068	CTCF.p2:-10:0.342
chr15	79001834	79001964	reg1001561.p1	16.358	+	TSC_hg19_v1_chr15_-_78933573 U62439 Y08416 BC096080 BC096081 BC096082 BC096083 NM_000750 U48861	-68326	-	TSC_hg19_v1_chr15_-_78913532 BC098443 BC006114 NM_000743 NM_001166694	-88327	-	AF385584 Y08418 BT006646 BT006897 CU674246 CU675253 M86383 M37981 TSC_hg19_v1_chr15_-_78913298 BC000513 BC001642 BC002996 U62432	-88666	-	TSC_hg19_v1_chr15_+_79102818 AK095823	100928	+	AY327122 AF140675 TSC_hg19_v1_chr15_-_79103698 BC061631 NM_014272 AK299844	101851	-	TSC_hg19_v1_chr15_+_79165157 NM_006791 NM_206839	163275	+	U62439|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##Y08416|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096080|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096081|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096082|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096083|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##NM_000750|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##U48861|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC098443|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC006114|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_000743|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_001166694|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AF385584|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##Y08418|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006646|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006897|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##M37981|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC000513|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC001642|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC002996|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##U62432|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AK095823|MORF4L1|10933|mortality factor 4 like 1##AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_006791|MORF4L1|10933|mortality factor 4 like 1##NM_206839|MORF4L1|10933|mortality factor 4 like 1	0.997139	CTCF.p2:25:0.997
chr10	126077918	126078043	reg1001563.p1	16.352	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	-224827	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-226081	-	BC137492 BC146862 AY358565 NM_198148	-426484	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	29493	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	29538	-	NM_001146340 TSC_hg19_v1_chr10_-_126138606	60597	-	BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##NM_001146340|NKX1-2|390010|NK1 homeobox 2	0.899018	CTCF.p2:0:0.899
chr1	209801107	209801228	reg1000736.p1	16.349	+	NM_020439 AK095713 AK289675 AF428261 BC032787	-44107	+	AK091113 AX746785 NM_001104548	-199002	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-1383518	-	TSC_hg19_v1_chr1_-_209824718 NM_001017402	23512	-	L25541 NM_001127641 D37766 TSC_hg19_v1_chr1_-_209825771 AK296851 AK309524	24557	-	TSC_hg19_v1_chr1_-_209825820 BC058922 NM_000228	24657	-	NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_025179|PLXNA2|5362|plexin A2##NM_001017402|LAMB3|3914|laminin, beta 3##L25541|LAMB3|3914|laminin, beta 3##NM_001127641|LAMB3|3914|laminin, beta 3##D37766|LAMB3|3914|laminin, beta 3##AK296851|LAMB3|3914|laminin, beta 3##AK309524|LAMB3|3914|laminin, beta 3##BC058922|LAMB3|3914|laminin, beta 3##NM_000228|LAMB3|3914|laminin, beta 3	0.999169	CTCF.p2:10:0.999
chr19	13088793	13088913	reg1001240.p1	16.348	+	AK095926 NM_152654 BC101800 BC113476 AB070695 HQ258091	-8401	+	TSC_hg19_v1_chr19_-_13068038 AF479749 NM_052850	-20808	-	AJ295986 BC004944 BC013027 BC013039 AF412816 AF475095 AJ429498 CU686712 BC069200 TSC_hg19_v1_chr19_-_13068030	-20834	-	TSC_hg19_v1_chr19_+_13106288 BC052801 NM_002501 AB385580 BT019732	17549	+	TSC_hg19_v1_chr19_+_13134807 AK297261 U18759	45951	+	TSC_hg19_v1_chr19_+_13135426 BX537794 AK295290	46544	+	AK095926|DAND5|199699|DAN domain family, member 5##NM_152654|DAND5|199699|DAN domain family, member 5##BC101800|DAND5|199699|DAN domain family, member 5##BC113476|DAND5|199699|DAN domain family, member 5##AB070695|DAND5|199699|DAN domain family, member 5##HQ258091|DAND5|199699|DAN domain family, member 5##AF479749|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##NM_052850|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AJ295986|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC004944|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC013027|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC013039|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AF412816|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AF475095|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AJ429498|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC069200|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##NM_002501|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BT019732|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK297261|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U18759|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	0.974277	CTCF.p2:-11:0.974
chr22	19897577	19897701	reg1001386.p1	16.345	+	TSC_hg19_v1_chr22_-_19842398 BC012060 NM_024627 BC008696 AB051432 AL832509 AF301895 AF238328 AY007378 NM_053004	-55234	-	TSC_hg19_v1_chr22_-_19842337 AK291262 BX640785 BX640969 BX640998	-55298	-	AF012130 AF012131 AF373867 NM_005992 NM_080646 NM_080647	-153414	+	TSC_hg19_v1_chr22_-_19929293 AB209724	31639	-	NM_000754 TSC_hg19_v1_chr22_+_19929294	31641	+	M58525 TSC_hg19_v1_chr22_+_19929321 AK130031 AK290440 BC000419 BC005867	31684	+	BC012060|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_024627|C22orf29|79680|chromosome 22 open reading frame 29##BC008696|C22orf29|79680|chromosome 22 open reading frame 29##AB051432|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AL832509|C22orf29|79680|chromosome 22 open reading frame 29##AF301895|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AF238328|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AY007378|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_053004|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AK291262|C22orf29|79680|chromosome 22 open reading frame 29##BX640785|C22orf29|79680|chromosome 22 open reading frame 29##BX640969|C22orf29|79680|chromosome 22 open reading frame 29##BX640998|C22orf29|79680|chromosome 22 open reading frame 29##AF012130|TBX1|6899|T-box 1##AF012131|TBX1|6899|T-box 1##AF373867|TBX1|6899|T-box 1##NM_005992|TBX1|6899|T-box 1##NM_080646|TBX1|6899|T-box 1##NM_080647|TBX1|6899|T-box 1##AB209724|TXNRD2|10587|thioredoxin reductase 2##NM_000754|COMT|1312|catechol-O-methyltransferase##M58525|COMT|1312|catechol-O-methyltransferase##AK130031|COMT|1312|catechol-O-methyltransferase##AK290440|COMT|1312|catechol-O-methyltransferase##BC000419|COMT|1312|catechol-O-methyltransferase##BC005867|COMT|1312|catechol-O-methyltransferase	0.999555	CTCF.p2:3:1.000
chr16	68362632	68362760	reg1001242.p1	16.342	+	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	-17737	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	-17870	-	TSC_hg19_v1_chr16_+_68298430 NM_001076785 NM_003983 CR749291 CR749475 AK310866 BC028216	-64246	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	119785	-	TSC_hg19_v1_chr16_+_68564035 BC040871	201337	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	210502	+	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_001076785|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##NM_003983|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749291|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749475|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK310866|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC028216|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)	0.341331	CTCF.p2:-64:0.284
chr1	9687141	9687276	reg1000875.p2	16.339	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-38252	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-87572	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	-87676	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	24596	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	196687	-	TSC_hg19_v1_chr1_-_9884023 AK304813	196813	-	BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1	1.558233	CTCF.p2:-24:0.559	CTCF.p2:42:1.000
chr5	17216356	17216489	reg1000999.p1	16.338	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-280037	-	BC050682 BC041694 TSC_hg19_v1_chr5_-_16936357 BC108736 BC032669	-280094	-	AK316138 TSC_hg19_v1_chr5_-_16742338	-474085	-	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	1190	+	TSC_hg19_v1_chr5_+_17217804 AF039656	1418	+	AK295087 BC031051 NM_001167667 NM_004934	2771900	-	AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##BC050682|MYO10|4651|myosin X##BC041694|MYO10|4651|myosin X##BC108736|MYO10|4651|myosin X##BC032669|MYO10|4651|myosin X##AK316138|MYO10|4651|myosin X##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2	0.070317	
chr18	60683621	60683762	reg1001673.p1	16.336	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-299383	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-299765	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	-301027	+	TSC_hg19_v1_chr18_-_60795898 AF401211	112244	-	BC027258 NM_000633 NM_000657	302869	-	TSC_hg19_v1_chr18_-_60986977 X06487	303302	-	BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2	0.98917	CTCF.p2:-15:0.989
chr1	110745742	110745868	reg1000866.p1	16.334	+	NM_001010898 AK289982 TSC_hg19_v1_chr1_+_110693135	-52671	+	AK098556 NM_203412 BC058929	-90730	+	AF008203 BC112007 BC113428 NM_006492	-132528	-	TSC_hg19_v1_chr1_+_110753347 NM_001039574 NM_004978	7539	+	AK310193 M64676 TSC_hg19_v1_chr1_+_110754079 BC101769	8192	+	AF368062 AF368063 AF368064 NM_001201545 NM_022768 BC098140 BC103493 BC103507 BC103660 TSC_hg19_v1_chr1_+_110882045	136189	+	NM_001010898|SLC6A17|388662|solute carrier family 6, member 17##AK289982|SLC6A17|388662|solute carrier family 6, member 17##AK098556|UBL4B|164153|ubiquitin-like 4B##NM_203412|UBL4B|164153|ubiquitin-like 4B##BC058929|UBL4B|164153|ubiquitin-like 4B##AF008203|ALX3|257|ALX homeobox 3##BC112007|ALX3|257|ALX homeobox 3##BC113428|ALX3|257|ALX homeobox 3##NM_006492|ALX3|257|ALX homeobox 3##NM_001039574|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_004978|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##AK310193|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##M64676|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##BC101769|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##AF368062|RBM15|64783|RNA binding motif protein 15##AF368063|RBM15|64783|RNA binding motif protein 15##AF368064|RBM15|64783|RNA binding motif protein 15##NM_001201545|RBM15|64783|RNA binding motif protein 15##NM_022768|RBM15|64783|RNA binding motif protein 15##BC098140|RBM15|64783|RNA binding motif protein 15##BC103493|RBM15|64783|RNA binding motif protein 15##BC103507|RBM15|64783|RNA binding motif protein 15##BC103660|RBM15|64783|RNA binding motif protein 15	0.999319	CTCF.p2:-14:0.999
chr3	149489585	149489696	reg1001366.p1	16.332	+	TSC_hg19_v1_chr3_-_149470277 AF059618 BC001228 BC022206 AF125096 BC093077 NM_016094	-19370	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	-19401	-	AK022036 NM_001168278	-68581	-	BC171805 NM_001144960	20969	-	TSC_hg19_v1_chr3_+_149530500 NM_007282 NM_183381 AK090638	40837	+	TSC_hg19_v1_chr3_+_149530987 AK313304	41346	+	AF059618|COMMD2|51122|COMM domain containing 2##BC001228|COMMD2|51122|COMM domain containing 2##BC022206|COMMD2|51122|COMM domain containing 2##AF125096|COMMD2|51122|COMM domain containing 2##BC093077|COMMD2|51122|COMM domain containing 2##NM_016094|COMMD2|51122|COMM domain containing 2##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##BC171805|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1##NM_001144960|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1##NM_007282|RNF13|11342|ring finger protein 13##NM_183381|RNF13|11342|ring finger protein 13##AK090638|RNF13|11342|ring finger protein 13##AK313304|RNF13|11342|ring finger protein 13	0.49988	CTCF.p2:1:0.500
chr15	91429336	91429472	reg1000686.p4	16.327	+	DQ891350 DQ894530 AB590559 AY513654 AY513655 AY513656 AY513657 NM_001143783 NM_001143784	-1131	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	-1703	+	NM_002569 X17094	-17520	+	TSC_hg19_v1_chr15_+_91445984 D55649 L28821	16572	+	AK289863 TSC_hg19_v1_chr15_+_91446685	17221	+	BC136448 BC144111 NM_006122	18015	+	DQ891350|FES|2242|feline sarcoma oncogene##DQ894530|FES|2242|feline sarcoma oncogene##AY513654|FES|2242|feline sarcoma oncogene##AY513655|FES|2242|feline sarcoma oncogene##AY513656|FES|2242|feline sarcoma oncogene##AY513657|FES|2242|feline sarcoma oncogene##NM_001143783|FES|2242|feline sarcoma oncogene##NM_001143784|FES|2242|feline sarcoma oncogene##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##D55649|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##L28821|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##AK289863|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	0.989617	CTCF.p2:19:0.990
chr22	43176214	43176335	reg1000802.p1	16.327	+	TSC_hg19_v1_chr22_-_43117270 AK312927	-58997	-	TSC_hg19_v1_chr22_-_43116877 BC017068 GU902275 GU902276 GU902277 GU902278 GU902279 GU902280 GU902281 AK130208 NM_017436	-59419	-	AK074388 TSC_hg19_v1_chr22_-_43089917 AJ245581 CU677819 AB590407 DQ891619 DQ894811	-86367	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	76937	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	76996	-	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	77081	-	AK312927|A4GALT|53947|alpha 1,4-galactosyltransferase##BC017068|A4GALT|53947|alpha 1,4-galactosyltransferase##NM_017436|A4GALT|53947|alpha 1,4-galactosyltransferase##AK074388|A4GALT|53947|alpha 1,4-galactosyltransferase##AJ245581|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ891619|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ894811|A4GALT|53947|alpha 1,4-galactosyltransferase##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3	0.995051	CTCF.p2:0:0.995
chr16	89772514	89772580	reg1004924.p1	16.326	+	TSC_hg19_v1_chr16_-_89768114 BC039608 BC053588 BC027606 NM_152339	-4428	-	TSC_hg19_v1_chr16_+_89753098 AB209829 BC017342 AK292351 BC093028 AK296631 AK290485 AF153430 AK312016 BC025301 BC032704	-19438	+	TSC_hg19_v1_chr16_+_89753087 AK298386 NM_001098533 NM_001160367 NM_052987 NM_052988 AK075036 L33264 AK295397	-19468	+	TSC_hg19_v1_chr16_+_89778259 AK096286	5716	+	TSC_hg19_v1_chr16_-_89787328 AB527115 NM_004913	14780	-	TSC_hg19_v1_chr16_+_89787441 NM_152287 AK056405 BC105959 BC107603 BC111408	14928	+	BC039608|SPATA2L|124044|spermatogenesis associated 2-like##BC053588|SPATA2L|124044|spermatogenesis associated 2-like##BC027606|SPATA2L|124044|spermatogenesis associated 2-like##NM_152339|SPATA2L|124044|spermatogenesis associated 2-like##AB209829|CDK10|8558|cyclin-dependent kinase 10##BC017342|CDK10|8558|cyclin-dependent kinase 10##AK292351|CDK10|8558|cyclin-dependent kinase 10##BC093028|CDK10|8558|cyclin-dependent kinase 10##AK296631|CDK10|8558|cyclin-dependent kinase 10##AK290485|CDK10|8558|cyclin-dependent kinase 10##AF153430|CDK10|8558|cyclin-dependent kinase 10##AK312016|CDK10|8558|cyclin-dependent kinase 10##BC025301|CDK10|8558|cyclin-dependent kinase 10##BC032704|CDK10|8558|cyclin-dependent kinase 10##AK298386|CDK10|8558|cyclin-dependent kinase 10##NM_001098533|CDK10|8558|cyclin-dependent kinase 10##NM_001160367|CDK10|8558|cyclin-dependent kinase 10##NM_052987|CDK10|8558|cyclin-dependent kinase 10##NM_052988|CDK10|8558|cyclin-dependent kinase 10##AK075036|CDK10|8558|cyclin-dependent kinase 10##L33264|CDK10|8558|cyclin-dependent kinase 10##AK295397|CDK10|8558|cyclin-dependent kinase 10##AK096286|LOC100128881|100128881|uncharacterized LOC100128881##NM_004913|C16orf7|9605|chromosome 16 open reading frame 7##NM_152287|ZNF276|92822|zinc finger protein 276##AK056405|ZNF276|92822|zinc finger protein 276##BC105959|ZNF276|92822|zinc finger protein 276##BC107603|ZNF276|92822|zinc finger protein 276##BC111408|ZNF276|92822|zinc finger protein 276	0.0	
chr8	140353244	140353373	reg1001621.p1	16.325	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	-427064	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-844202	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-3883107	+	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	361974	-	AB067469 TSC_hg19_v1_chr8_-_141467841	1114517	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	1114550	-	AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9	1.313364	CTCF.p2:6:0.990	CTCF.p2:-46:0.306
chr8	103823194	103823333	reg1001602.p1	16.323	+	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	-155331	-	BC011538 NM_001032282 S81439	-157171	-	NM_024410 AK315276 BC104456 BC104457	-259402	+	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	53096	-	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	53132	-	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	210004	+	AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1##BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1	0.279524	CTCF.p2:5:0.280
chr12	108001413	108001524	reg1001029.p1	16.321	+	AK127295 NM_001017523	-26835	+	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	-289255	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-513858	-	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	78199	+	AK056378 TSC_hg19_v1_chr12_-_108154899	153371	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	153442	-	AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK056378|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4	0.998724	CTCF.p2:6:0.999
chr14	75770325	75770455	reg1001758.p1	16.320	+	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	-24808	+	TSC_hg19_v1_chr14_-_75643341 NM_006827	-127038	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	-127057	-	NM_001135047 TSC_hg19_v1_chr14_+_75894724	124251	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	124623	+	BC051303 NM_001135049	128446	+	NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##NM_006827|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2	0.068149	
chr15	55509935	55510042	reg1000937.p1	16.319	+	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	-20809	-	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	-20896	-	NM_001080534	-1204888	+	AF125393 NM_183234 U57094 U38654 NM_004580	52549	-	BC132800 BC136423 BC107680 NM_183236	53110	-	TSC_hg19_v1_chr15_-_55582012 AK312836 NM_183235	72003	-	BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family##BC132800|RAB27A|5873|RAB27A, member RAS oncogene family##BC136423|RAB27A|5873|RAB27A, member RAS oncogene family##BC107680|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183236|RAB27A|5873|RAB27A, member RAS oncogene family##AK312836|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183235|RAB27A|5873|RAB27A, member RAS oncogene family	0.481864	CTCF.p2:-29:0.482
chr22	38077688	38077812	reg1001462.p1	16.318	+	CR456511 NM_002305 EU363770 AK312161 BC020675 TSC_hg19_v1_chr22_+_38071644 AL832117 D28452 BC001693 AB097036 J04456 X15256 X14829	-6093	+	TSC_hg19_v1_chr22_+_38054751 BC064922 NM_020315 BC000320 BC018844 AY125047	-23005	+	TSC_hg19_v1_chr22_+_38035718 CR456576 AB463257 CU013175 CU013463	-41991	+	TSC_hg19_v1_chr22_+_38082360 NM_024313 AK057139 AK294700 AK316443 BC002808 AK310084 AL160132 CR456463 AB528193 CU012996 CU013284 DQ278603	4625	+	NM_001039141 TSC_hg19_v1_chr22_+_38093008 AK096634	15252	+	TSC_hg19_v1_chr22_+_38142244 NM_007032 NM_138632	64487	+	CR456511|LGALS1|3956|lectin, galactoside-binding, soluble, 1##NM_002305|LGALS1|3956|lectin, galactoside-binding, soluble, 1##EU363770|LGALS1|3956|lectin, galactoside-binding, soluble, 1##AK312161|LGALS1|3956|lectin, galactoside-binding, soluble, 1##BC020675|LGALS1|3956|lectin, galactoside-binding, soluble, 1##AL832117|LGALS1|3956|lectin, galactoside-binding, soluble, 1##D28452|LGALS1|3956|lectin, galactoside-binding, soluble, 1##BC001693|LGALS1|3956|lectin, galactoside-binding, soluble, 1##AB097036|LGALS1|3956|lectin, galactoside-binding, soluble, 1##J04456|LGALS1|3956|lectin, galactoside-binding, soluble, 1##X15256|LGALS1|3956|lectin, galactoside-binding, soluble, 1##X14829|LGALS1|3956|lectin, galactoside-binding, soluble, 1##BC064922|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##NM_020315|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##BC000320|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##BC018844|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##AY125047|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##CR456576|SH3BP1|23616|SH3-domain binding protein 1##CU013175|SH3BP1|23616|SH3-domain binding protein 1##CU013463|SH3BP1|23616|SH3-domain binding protein 1##NM_024313|NOL12|79159|nucleolar protein 12##AK057139|NOL12|79159|nucleolar protein 12##AK294700|NOL12|79159|nucleolar protein 12##AK316443|NOL12|79159|nucleolar protein 12##BC002808|NOL12|79159|nucleolar protein 12##AL160132|NOL12|79159|nucleolar protein 12##CR456463|NOL12|79159|nucleolar protein 12##NM_001039141|TRIOBP|11078|TRIO and F-actin binding protein##AK096634|TRIOBP|11078|TRIO and F-actin binding protein##NM_007032|TRIOBP|11078|TRIO and F-actin binding protein##NM_138632|TRIOBP|11078|TRIO and F-actin binding protein	0.999699	CTCF.p2:9:1.000
chr3	69355623	69355761	reg1001564.p1	16.318	+	TSC_hg19_v1_chr3_-_69299315 AK295045	-56382	-	AM393202 BC121019 BC017925 AL832033 AK300096 AL832709 BC039202 NM_198271	-184052	-	TSC_hg19_v1_chr3_+_69134171 NM_006407 AF070523 AF115965 AF125530 AB097051 AF161476 AK301637 AK303148 AK074612 BC005143 BC107899 BC020797 AB014765 AK223566 AK312731 AB052638 AY102608	-221565	+	AB023230 TSC_hg19_v1_chr3_-_69435240	79539	-	NM_015123 BC057836	79749	-	TSC_hg19_v1_chr3_-_69591738 AK091076	236065	-	AK295045|FRMD4B|23150|FERM domain containing 4B##AM393202|LMOD3|56203|leiomodin 3 (fetal)##BC121019|LMOD3|56203|leiomodin 3 (fetal)##BC017925|LMOD3|56203|leiomodin 3 (fetal)##AL832033|LMOD3|56203|leiomodin 3 (fetal)##AK300096|LMOD3|56203|leiomodin 3 (fetal)##AL832709|LMOD3|56203|leiomodin 3 (fetal)##BC039202|LMOD3|56203|leiomodin 3 (fetal)##NM_198271|LMOD3|56203|leiomodin 3 (fetal)##NM_006407|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF070523|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF115965|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF125530|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB097051|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF161476|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK301637|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK074612|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC005143|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC107899|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC020797|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB014765|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK223566|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK312731|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB052638|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AY102608|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB023230|FRMD4B|23150|FERM domain containing 4B##NM_015123|FRMD4B|23150|FERM domain containing 4B##BC057836|FRMD4B|23150|FERM domain containing 4B##AK091076|FRMD4B|23150|FERM domain containing 4B	0.859499	CTCF.p2:13:0.859
chr8	22419461	22419567	reg1000859.p1	16.316	+	TSC_hg19_v1_chr8_+_22409439 AK303950 AF037261 BC067260	-10061	+	TSC_hg19_v1_chr8_+_22409237 BC091514 NM_005775	-10276	+	TSC_hg19_v1_chr8_+_22298813 AY007249 AB385002 CU678778	-120670	+	TSC_hg19_v1_chr8_+_22423258 NM_001018003 AF064807 BC010146	3723	+	AK092968 AX747829 NM_021630	16739	+	TSC_hg19_v1_chr8_+_22436642 AK027800 BC071774 AF289563 BC021556	17192	+	AK303950|SORBS3|10174|sorbin and SH3 domain containing 3##AF037261|SORBS3|10174|sorbin and SH3 domain containing 3##BC067260|SORBS3|10174|sorbin and SH3 domain containing 3##BC091514|SORBS3|10174|sorbin and SH3 domain containing 3##NM_005775|SORBS3|10174|sorbin and SH3 domain containing 3##AY007249|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##NM_001018003|SORBS3|10174|sorbin and SH3 domain containing 3##AF064807|SORBS3|10174|sorbin and SH3 domain containing 3##BC010146|SORBS3|10174|sorbin and SH3 domain containing 3##AK092968|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_021630|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK027800|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##BC071774|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AF289563|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##BC021556|PDLIM2|64236|PDZ and LIM domain 2 (mystique)	0.946967	CTCF.p2:4:0.947
chr12	111834855	111834999	reg1001610.p1	16.315	+	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	-28017	-	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	-28081	-	BC151245 NM_015267 AB006631 AF271236	-363055	+	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	8822	+	AK126309 TSC_hg19_v1_chr12_-_111893987	58996	-	TSC_hg19_v1_chr12_-_112036257 AK095017	201348	-	BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3##AK095017|ATXN2|6311|ataxin 2	1.950115	CTCF.p2:13:0.950	CTCF.p2:-22:1.000
chr21	46369804	46369934	reg1001813.p1	16.315	+	TSC_hg19_v1_chr21_+_46359968 CU679303	-9900	+	TSC_hg19_v1_chr21_+_46359920 AF391113 AF391114 BC009341 NM_058190	-9944	+	BC128244 BC128245 AF380178 AY040088 TSC_hg19_v1_chr21_-_46359834 AK127059	-10106	-	TSC_hg19_v1_chr21_+_46494502 AY082339 BC030663 NM_001112 NM_001160230 NM_015833 NM_015834 AB194369 AB194370 AB194371 AB194372 AB194373 AF525422 AF533142 AY135659 U76420 U76421 U76422 BC065545 U82120	124714	+	TSC_hg19_v1_chr21_+_46572480 FJ169506	202629	+	TSC_hg19_v1_chr21_-_46707808 BC064623 AJ575591 AL110285 AB023175 AJ302079 AJ302080 AY066015 AK294966 AK290732 AK298080 NM_015227 NM_133635	337932	-	AF391113|FAM207A|85395|family with sequence similarity 207, member A##AF391114|FAM207A|85395|family with sequence similarity 207, member A##BC009341|FAM207A|85395|family with sequence similarity 207, member A##NM_058190|FAM207A|85395|family with sequence similarity 207, member A##BC128244|C21orf67|84536|chromosome 21 open reading frame 67##BC128245|C21orf67|84536|chromosome 21 open reading frame 67##AF380178|C21orf67|84536|chromosome 21 open reading frame 67##AY040088|C21orf67|84536|chromosome 21 open reading frame 67##AY082339|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC030663|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001112|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001160230|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015833|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015834|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194369|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194370|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194371|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194372|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194373|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF525422|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF533142|ADARB1|104|adenosine deaminase, RNA-specific, B1##AY135659|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76420|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76421|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76422|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC065545|ADARB1|104|adenosine deaminase, RNA-specific, B1##U82120|ADARB1|104|adenosine deaminase, RNA-specific, B1##FJ169506|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC064623|POFUT2|23275|protein O-fucosyltransferase 2##AJ575591|POFUT2|23275|protein O-fucosyltransferase 2##AL110285|POFUT2|23275|protein O-fucosyltransferase 2##AB023175|POFUT2|23275|protein O-fucosyltransferase 2##AJ302079|POFUT2|23275|protein O-fucosyltransferase 2##AJ302080|POFUT2|23275|protein O-fucosyltransferase 2##AY066015|POFUT2|23275|protein O-fucosyltransferase 2##AK294966|POFUT2|23275|protein O-fucosyltransferase 2##AK290732|POFUT2|23275|protein O-fucosyltransferase 2##AK298080|POFUT2|23275|protein O-fucosyltransferase 2##NM_015227|POFUT2|23275|protein O-fucosyltransferase 2##NM_133635|POFUT2|23275|protein O-fucosyltransferase 2	0.999935	CTCF.p2:-14:1.000
chr11	45132304	45132408	reg1001068.p1	16.314	+	AF275818 NM_020229	-16793	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	-159939	-	TSC_hg19_v1_chr11_-_44956087 AF010315	-176249	-	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	175394	-	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	554828	-	NM_001145265 NM_001145266	693266	+	AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1	0.999826	CTCF.p2:-10:1.000
chr5	76070492	76070628	reg1000903.p2	16.314	+	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	-58604	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	-151415	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	-371444	+	NM_005242 BC018130 TSC_hg19_v1_chr5_+_76114854 U34038	44292	+	TSC_hg19_v1_chr5_+_76114883 BC012453 AY336105 BT009856 CU676194 CU680330 DQ890966 DQ894139	44384	+	BC022320 NM_130772	75265	+	AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_005242|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC018130|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##U34038|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC012453|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##AY336105|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BT009856|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ890966|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ894139|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC022320|S100Z|170591|S100 calcium binding protein Z##NM_130772|S100Z|170591|S100 calcium binding protein Z	0.997687	CTCF.p2:18:0.998
chr1	152898672	152898817	reg1001114.p2	16.313	+	AK300492 AK301649 NM_005547	-17714	+	AK312020 BC014593 NM_030663 BC016744 X89960	-47936	+	DQ991251 NM_001128600	-83415	+	NM_173080 BC112170 BC112172 BC069445 BC069549	44389	+	BC105081 BC105083 BC143782 NM_001199828 NM_005987	57819	+	NM_001097589 NM_005416 AK309626 AK311823 BC017802 EF553525 AJ243667 AY118269	75490	+	AK300492|IVL|3713|involucrin##NM_005547|IVL|3713|involucrin##AK312020|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##BC014593|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##NM_030663|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##BC016744|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##X89960|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##DQ991251|LCE6A|448835|late cornified envelope 6A##NM_001128600|LCE6A|448835|late cornified envelope 6A##NM_173080|SPRR4|163778|small proline-rich protein 4##BC112170|SPRR4|163778|small proline-rich protein 4##BC112172|SPRR4|163778|small proline-rich protein 4##BC069445|SPRR4|163778|small proline-rich protein 4##BC069549|SPRR4|163778|small proline-rich protein 4##BC105081|SPRR1A|6698|small proline-rich protein 1A##BC105083|SPRR1A|6698|small proline-rich protein 1A##NM_001199828|SPRR1A|6698|small proline-rich protein 1A##NM_005987|SPRR1A|6698|small proline-rich protein 1A##NM_001097589|SPRR3|6707|small proline-rich protein 3##NM_005416|SPRR3|6707|small proline-rich protein 3##AK311823|SPRR3|6707|small proline-rich protein 3##BC017802|SPRR3|6707|small proline-rich protein 3##EF553525|SPRR3|6707|small proline-rich protein 3##AJ243667|SPRR3|6707|small proline-rich protein 3##AY118269|SPRR3|6707|small proline-rich protein 3	0.0	
chr12	122615677	122615802	reg1001536.p1	16.312	+	BC069272 TSC_hg19_v1_chr12_+_122614551	-1219	+	TSC_hg19_v1_chr12_+_122516682 AF312918	-99022	+	TSC_hg19_v1_chr12_+_122516655 BC151841 NM_014938	-99132	+	AK124107 NM_152759	36526	+	AB590927 BC132998 BC133000 AY499343 NM_001014336	42995	-	TSC_hg19_v1_chr12_+_122667676 NM_001098519	51935	+	BC069272|MLXIP|22877|MLX interacting protein##AF312918|MLXIP|22877|MLX interacting protein##BC151841|MLXIP|22877|MLX interacting protein##NM_014938|MLXIP|22877|MLX interacting protein##AK124107|LRRC43|254050|leucine rich repeat containing 43##NM_152759|LRRC43|254050|leucine rich repeat containing 43##BC132998|IL31|386653|interleukin 31##BC133000|IL31|386653|interleukin 31##AY499343|IL31|386653|interleukin 31##NM_001014336|IL31|386653|interleukin 31##NM_001098519|LRRC43|254050|leucine rich repeat containing 43	0.603482	CTCF.p2:-7:0.603
chr1	207258168	207258280	reg1000943.p1	16.309	+	AK292883 TSC_hg19_v1_chr1_+_207226619 NM_001018053 NM_006212 AJ005578 AF470623 AB044805 BC112103 BC112105 BC069350 BC069385 BC069583 BC069586 BC069600 BC075075 BC075076	-31587	+	TSC_hg19_v1_chr1_-_207224335 AL833081 BC137166 BC137167 NM_018566	-33865	-	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	-52176	-	NM_001017365 NM_001017366	3987	+	BC005378 NM_000716 NM_001017364 L11245 NM_001017367 AK315137	4397	+	TSC_hg19_v1_chr1_+_207277658 BC022312 NM_000715 AK303798 AK313164 M31452 AK303793	19425	+	AK292883|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_001018053|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_006212|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AJ005578|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AF470623|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AB044805|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112103|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112105|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069350|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069385|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069583|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069586|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069600|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075075|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075076|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AL833081|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137166|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137167|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##NM_018566|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116##NM_001017365|C4BPB|725|complement component 4 binding protein, beta##NM_001017366|C4BPB|725|complement component 4 binding protein, beta##BC005378|C4BPB|725|complement component 4 binding protein, beta##NM_000716|C4BPB|725|complement component 4 binding protein, beta##NM_001017364|C4BPB|725|complement component 4 binding protein, beta##L11245|C4BPB|725|complement component 4 binding protein, beta##NM_001017367|C4BPB|725|complement component 4 binding protein, beta##AK315137|C4BPB|725|complement component 4 binding protein, beta##BC022312|C4BPA|722|complement component 4 binding protein, alpha##NM_000715|C4BPA|722|complement component 4 binding protein, alpha##AK303798|C4BPA|722|complement component 4 binding protein, alpha##AK313164|C4BPA|722|complement component 4 binding protein, alpha##M31452|C4BPA|722|complement component 4 binding protein, alpha##AK303793|C4BPA|722|complement component 4 binding protein, alpha	0.059584	
chr1	222807883	222807996	reg1001392.p1	16.308	+	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	-16539	+	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	-44762	-	AY358602 BC007638 BC016552 NM_024746	-86505	-	TSC_hg19_v1_chr1_+_222817647 AK296712 AX775845	9713	+	AL833718 TSC_hg19_v1_chr1_-_222885817 BC015535 BC067805 AK289865 AK022868 BC171848 NM_022831	77823	-	TSC_hg19_v1_chr1_+_222885905 AK056983 NM_144695	77963	+	NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##AK296712|MIA3|375056|melanoma inhibitory activity family, member 3##AL833718|AIDA|64853|axin interactor, dorsalization associated##BC015535|AIDA|64853|axin interactor, dorsalization associated##BC067805|AIDA|64853|axin interactor, dorsalization associated##AK289865|AIDA|64853|axin interactor, dorsalization associated##AK022868|AIDA|64853|axin interactor, dorsalization associated##BC171848|AIDA|64853|axin interactor, dorsalization associated##NM_022831|AIDA|64853|axin interactor, dorsalization associated##AK056983|BROX|148362|BRO1 domain and CAAX motif containing##NM_144695|BROX|148362|BRO1 domain and CAAX motif containing	0.963457	CTCF.p2:7:0.963
chr5	89561211	89561335	reg1000862.p2	16.308	+	AL833268 AL833274 NM_001131005 NM_001193347	-1361379	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1376009	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-1376153	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	144266	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	208909	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	209305	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.974506	CTCF.p2:9:0.975
chr4	168544014	168544115	reg1000955.p1	16.306	+	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	-388324	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	-388360	-	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	-388453	-	NM_007193 BC007320 AF196478 AJ238979 CU675613 EU176730	469705	+	TSC_hg19_v1_chr4_-_169239951 AK001649 BC038115 AK307404 NM_017631	695841	-	TSC_hg19_v1_chr4_-_169401573 AK096369	857516	-	AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_007193|ANXA10|11199|annexin A10##BC007320|ANXA10|11199|annexin A10##AF196478|ANXA10|11199|annexin A10##AJ238979|ANXA10|11199|annexin A10##EU176730|ANXA10|11199|annexin A10##AK001649|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##BC038115|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##AK307404|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##NM_017631|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##AK096369|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like	0.999375	CTCF.p2:-5:0.999
chr1	26928983	26929134	reg1001192.p1	16.302	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	-56700	+	TSC_hg19_v1_chr1_+_26872335 AK092955	-56735	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-72723	+	NM_006015 NM_139135 AF231056	93464	+	AB210022 AF219114 AB051293 AF265208 TSC_hg19_v1_chr1_+_27024003	94911	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	172230	+	AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.987099	CTCF.p2:-19:0.987
chr14	94503029	94503160	reg1001497.p1	16.302	+	AK025569 TSC_hg19_v1_chr14_+_94492747	-10346	+	TSC_hg19_v1_chr14_+_94492685 BC009615 BC068058 NM_023112	-10391	+	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	-60018	-	AB209382 AF161446 AK294613 TSC_hg19_v1_chr14_-_94547557 BC096826 AL136886 BC008847 BC009406 BX537533 AK296726 AK297232 AK304504 AK025162 AF214731 NM_020414	44432	-	TSC_hg19_v1_chr14_+_94547661 NM_145249 NM_206949 BC015423	44571	+	NM_001130080 NM_005532 TSC_hg19_v1_chr14_+_94577081 AK289535 AK097084 AK312089 BX647330 AJ294851 AY126456 AY126457 AY126458 BC015492	74025	+	AK025569|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB209382|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AF161446|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK294613|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC096826|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AL136886|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC008847|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC009406|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BX537533|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK296726|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK297232|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK304504|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK025162|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AF214731|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##NM_020414|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##NM_145249|IFI27L1|122509|interferon, alpha-inducible protein 27-like 1##NM_206949|IFI27L1|122509|interferon, alpha-inducible protein 27-like 1##BC015423|IFI27L1|122509|interferon, alpha-inducible protein 27-like 1##NM_001130080|IFI27|3429|interferon, alpha-inducible protein 27##NM_005532|IFI27|3429|interferon, alpha-inducible protein 27##AK289535|IFI27|3429|interferon, alpha-inducible protein 27##AK097084|IFI27|3429|interferon, alpha-inducible protein 27##AK312089|IFI27|3429|interferon, alpha-inducible protein 27##BX647330|IFI27|3429|interferon, alpha-inducible protein 27##AJ294851|IFI27|3429|interferon, alpha-inducible protein 27##AY126456|IFI27|3429|interferon, alpha-inducible protein 27##AY126457|IFI27|3429|interferon, alpha-inducible protein 27##AY126458|IFI27|3429|interferon, alpha-inducible protein 27##BC015492|IFI27|3429|interferon, alpha-inducible protein 27	0.530612	CTCF.p2:96:0.371
chr19	17814808	17814952	reg1002003.p1	16.301	+	AB028955 NM_001080421 AB587313 TSC_hg19_v1_chr19_-_17799158	-15782	-	TSC_hg19_v1_chr19_+_17666507 AK075541 NM_024656	-148369	+	TSC_hg19_v1_chr19_+_17666457 BC108308	-148417	+	TSC_hg19_v1_chr19_+_17830288 AK292555	15410	+	DQ387861 NM_018174 AL834233 BC067115 TSC_hg19_v1_chr19_+_17830310 BC080547 AJ440784 AK027623 BC113952 AK308975	15429	+	TSC_hg19_v1_chr19_+_17858564 NM_001161357 NM_001161358 AK291410 BC028021	43671	+	AB028955|UNC13A|23025|unc-13 homolog A (C. elegans)##NM_001080421|UNC13A|23025|unc-13 homolog A (C. elegans)##AK075541|GLT25D1|79709|glycosyltransferase 25 domain containing 1##NM_024656|GLT25D1|79709|glycosyltransferase 25 domain containing 1##BC108308|GLT25D1|79709|glycosyltransferase 25 domain containing 1##AK292555|MAP1S|55201|microtubule-associated protein 1S##DQ387861|MAP1S|55201|microtubule-associated protein 1S##NM_018174|MAP1S|55201|microtubule-associated protein 1S##AL834233|MAP1S|55201|microtubule-associated protein 1S##BC067115|MAP1S|55201|microtubule-associated protein 1S##BC080547|MAP1S|55201|microtubule-associated protein 1S##AJ440784|MAP1S|55201|microtubule-associated protein 1S##AK027623|MAP1S|55201|microtubule-associated protein 1S##BC113952|MAP1S|55201|microtubule-associated protein 1S##AK308975|MAP1S|55201|microtubule-associated protein 1S##NM_001161357|FCHO1|23149|FCH domain only 1##NM_001161358|FCHO1|23149|FCH domain only 1##AK291410|FCHO1|23149|FCH domain only 1##BC028021|FCHO1|23149|FCH domain only 1	0.99748	CTCF.p2:-9:0.997
chr5	63443811	63443929	reg1001705.p1	16.297	+	AK314187 TSC_hg19_v1_chr5_-_63258084	-185848	-	AF498978 BC069159 NM_000524 AB464441 BC136263 TSC_hg19_v1_chr5_-_63257719 AK291429 AK311460	-186208	-	AK123022 NM_181506 BX649157 AY358733 BC110838 AY280614	-1569232	+	TSC_hg19_v1_chr5_+_63461666 AK090756 AX746601 NM_001113561 NM_178532 BC101277 BC101278 BC101279 AL832580 BC101397	17811	+	BC140707 NM_001029875 BX640900	358611	+	NM_001164442 TSC_hg19_v1_chr5_+_63986235	542315	+	AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AF498978|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC069159|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_000524|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC136263|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK291429|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK123022|LRRC70|100130733|leucine rich repeat containing 70##NM_181506|LRRC70|100130733|leucine rich repeat containing 70##AY358733|LRRC70|100130733|leucine rich repeat containing 70##BC110838|LRRC70|100130733|leucine rich repeat containing 70##AY280614|LRRC70|100130733|leucine rich repeat containing 70##AK090756|RNF180|285671|ring finger protein 180##NM_001113561|RNF180|285671|ring finger protein 180##NM_178532|RNF180|285671|ring finger protein 180##BC101277|RNF180|285671|ring finger protein 180##BC101278|RNF180|285671|ring finger protein 180##BC101279|RNF180|285671|ring finger protein 180##AL832580|RNF180|285671|ring finger protein 180##BC101397|RNF180|285671|ring finger protein 180##BC140707|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001029875|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##BX640900|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001164442|FAM159B|100132916|family with sequence similarity 159, member B	0.713285	CTCF.p2:-13:0.713
chr15	74595360	74595501	reg1000815.p2	16.296	+	NM_025055 AK057417	-66726	+	AK299191 NM_001199040	-93385	-	AF352729 AY358748 BC015881 AK056125 NM_001142617 NM_001142619 NM_001142620 TSC_hg19_v1_chr15_-_74501378	-94087	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	15475	+	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	63105	-	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	64573	-	NM_025055|CCDC33|80125|coiled-coil domain containing 33##AK057417|CCDC33|80125|coiled-coil domain containing 33##AK299191|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001199040|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AF352729|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AY358748|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##BC015881|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AK056125|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142617|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142619|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142620|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	0.995331	CTCF.p2:-3:0.995
chr3	124283936	124284067	reg1001293.p1	16.296	+	TSC_hg19_v1_chr3_+_124103674 AK131379	-180378	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-470396	+	AF303889 NM_017578	-573803	-	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	19527	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	165238	+	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	165315	+	AK131379|KALRN|8997|kalirin, RhoGEF kinase##AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase##AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase	1.041085	CTCF.p2:-26:0.999
chr4	115307934	115308077	reg1001616.p1	16.296	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-407166	-	TSC_hg19_v1_chr4_-_114682923 NM_001221 NM_172114 NM_172115 NM_172127 NM_172128 NM_172129	-625035	-	TSC_hg19_v1_chr4_-_114682619 AK055642 AB209288	-625349	-	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	211578	+	NM_003360 U30930	235517	+	BC113075 BC012326 AK289670 AB036429 NM_022569	726976	-	AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##NM_001221|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172114|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172115|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172127|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172128|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172129|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK055642|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AB209288|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	0.999508	CTCF.p2:-22:1.000
chr19	47117504	47117654	reg1002073.p1	16.295	+	AK310762 AK295927 TSC_hg19_v1_chr19_+_47105407	-12212	+	TSC_hg19_v1_chr19_+_47104586 J04046 BC005137	-12967	+	TSC_hg19_v1_chr19_+_47104543 NM_005184	-13059	+	BC017857 L29016 D29634 BC110342 BC075814 D25418 TSC_hg19_v1_chr19_-_47128333 AK315278 NM_000960	10744	-	AF493875 NM_033258 BC095514	20360	-	TSC_hg19_v1_chr19_-_47164311 BC034052 NM_145056	46791	-	AK310762|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##AK295927|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##J04046|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##BC005137|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##NM_005184|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##L29016|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##D29634|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC110342|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC075814|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##D25418|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##AK315278|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##NM_000960|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##AF493875|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##NM_033258|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##BC095514|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)##NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	0.966627	CTCF.p2:-18:0.925
chr19	4851721	4851855	reg1001182.p1	16.294	+	TSC_hg19_v1_chr19_-_4831725 BC035331 NM_182919	-20063	-	AF070530 TSC_hg19_v1_chr19_-_4817612	-34230	-	TSC_hg19_v1_chr19_+_4791757 AK074232 BC004988 AY356352 EU446817 AB384759 AJ311359	-59976	+	TSC_hg19_v1_chr19_-_4867650 AK225045 BC001590	15857	-	AF055574 TSC_hg19_v1_chr19_-_4867668 AK226088 AK225400 AK122671 BC005818 BC007566 BC019278 AF057140	15877	-	AK223054 AK312740 TSC_hg19_v1_chr19_-_4867712 AK291104 NM_001164189 NM_001164194 NM_005817	15954	-	BC035331|TICAM1|148022|toll-like receptor adaptor molecule 1##NM_182919|TICAM1|148022|toll-like receptor adaptor molecule 1##AF070530|TICAM1|148022|toll-like receptor adaptor molecule 1##AK074232|FEM1A|55527|fem-1 homolog a (C. elegans)##BC004988|FEM1A|55527|fem-1 homolog a (C. elegans)##AY356352|FEM1A|55527|fem-1 homolog a (C. elegans)##EU446817|FEM1A|55527|fem-1 homolog a (C. elegans)##AJ311359|FEM1A|55527|fem-1 homolog a (C. elegans)##AK225045|PLIN3|10226|perilipin 3##BC001590|PLIN3|10226|perilipin 3##AF055574|PLIN3|10226|perilipin 3##AK226088|PLIN3|10226|perilipin 3##AK225400|PLIN3|10226|perilipin 3##AK122671|PLIN3|10226|perilipin 3##BC005818|PLIN3|10226|perilipin 3##BC007566|PLIN3|10226|perilipin 3##BC019278|PLIN3|10226|perilipin 3##AF057140|PLIN3|10226|perilipin 3##AK223054|PLIN3|10226|perilipin 3##AK312740|PLIN3|10226|perilipin 3##AK291104|PLIN3|10226|perilipin 3##NM_001164189|PLIN3|10226|perilipin 3##NM_001164194|PLIN3|10226|perilipin 3##NM_005817|PLIN3|10226|perilipin 3	0.995935	CTCF.p2:23:0.996
chr3	152760956	152761064	reg1000987.p2	16.294	+	NM_002563 Z49205	-208275	+	AY358260 NM_001123228	-702232	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-743817	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	119016	+	TSC_hg19_v1_chr3_+_152880058 BC012362	119038	+	AF086445 NM_001101337	441273	+	NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79	0.969703	CTCF.p2:0:0.970
chr2	191247725	191247854	reg1001557.p1	16.293	+	TSC_hg19_v1_chr2_+_191208645 BC106006	-39133	+	TSC_hg19_v1_chr2_+_191208326 AK093560	-39415	+	NM_001128928 NM_002194 TSC_hg19_v1_chr2_+_191208270	-39553	+	TSC_hg19_v1_chr2_+_191273080 AK127176 NM_017694	25274	+	AK098085 TSC_hg19_v1_chr2_+_191301120	53281	+	AK296987 TSC_hg19_v1_chr2_-_191399436	151638	-	BC106006|INPP1|3628|inositol polyphosphate-1-phosphatase##AK093560|INPP1|3628|inositol polyphosphate-1-phosphatase##NM_001128928|INPP1|3628|inositol polyphosphate-1-phosphatase##NM_002194|INPP1|3628|inositol polyphosphate-1-phosphatase##AK127176|MFSD6|54842|major facilitator superfamily domain containing 6##NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6##AK098085|MFSD6|54842|major facilitator superfamily domain containing 6##AK296987|TMEM194B|100131211|transmembrane protein 194B	0.473417	CTCF.p2:-7:0.473
chr12	6574764	6574887	reg1001468.p1	16.286	+	NM_018009 TSC_hg19_v1_chr12_+_6561272 BC015017 AK223163 AK001005 AK002056 AK222956 AK098035 HQ258015	-13531	+	AK315732 NM_001242 BC012160 M63928 DQ892296 EU176659 AB590221 CU680244	-20679	+	TSC_hg19_v1_chr12_+_6493333 AK095418 BC026262 AK027080 L04270 NM_002342 AB527559 DQ891995 DQ895185 CU693188	-81453	+	TSC_hg19_v1_chr12_-_6579844 AF060538 BC023286 AK289498 AK296294 AK303137 AK309184 NM_014231 NM_016830 NM_199245	4989	-	BC000191 TSC_hg19_v1_chr12_-_6602417 BC014329 AB049959 AF151075 AF212248 NM_016497	27619	-	TSC_hg19_v1_chr12_+_6602542 D63880 BC016913	27724	+	NM_018009|TAPBPL|55080|TAP binding protein-like##BC015017|TAPBPL|55080|TAP binding protein-like##AK223163|TAPBPL|55080|TAP binding protein-like##AK001005|TAPBPL|55080|TAP binding protein-like##AK002056|TAPBPL|55080|TAP binding protein-like##AK222956|TAPBPL|55080|TAP binding protein-like##AK098035|TAPBPL|55080|TAP binding protein-like##HQ258015|TAPBPL|55080|TAP binding protein-like##AK315732|CD27|939|CD27 molecule##NM_001242|CD27|939|CD27 molecule##BC012160|CD27|939|CD27 molecule##M63928|CD27|939|CD27 molecule##DQ892296|CD27|939|CD27 molecule##EU176659|CD27|939|CD27 molecule##AK095418|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##BC026262|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK027080|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##L04270|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##NM_002342|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ891995|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ895185|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AF060538|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC023286|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK289498|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK296294|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK303137|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK309184|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_014231|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_016830|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_199245|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC000191|MRPL51|51258|mitochondrial ribosomal protein L51##BC014329|MRPL51|51258|mitochondrial ribosomal protein L51##AB049959|MRPL51|51258|mitochondrial ribosomal protein L51##AF151075|MRPL51|51258|mitochondrial ribosomal protein L51##AF212248|MRPL51|51258|mitochondrial ribosomal protein L51##NM_016497|MRPL51|51258|mitochondrial ribosomal protein L51##D63880|NCAPD2|9918|non-SMC condensin I complex, subunit D2##BC016913|NCAPD2|9918|non-SMC condensin I complex, subunit D2	0.052278	
chr19	11146723	11146856	reg1000914.p2	16.278	+	BC136644 AB590582 BC151849 EU430756 EU430757 EU430758 EU430759 NM_001128845 NM_001128846 NM_001128847 NM_001128848 AB209313	-51913	+	TSC_hg19_v1_chr19_+_11071823 NM_001128849 U29175 D26156	-74965	+	TSC_hg19_v1_chr19_+_11071720 BC035916	-75039	+	NM_000527 NM_001195798 NM_001195799 NM_001195800 NM_001195802 NM_001195803 TSC_hg19_v1_chr19_+_11200115	53288	+	TSC_hg19_v1_chr19_+_11200138 AK295612 AK296312 AK299038 AK300313	53343	+	TSC_hg19_v1_chr19_+_11200148 AB209409 BC014514 AY114155 AB384938 DQ893879 BT007361	53396	+	BC136644|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC151849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430756|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430757|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430758|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430759|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128845|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128846|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128847|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128848|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##AB209313|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##U29175|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##D26156|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_000527|LDLR|3949|low density lipoprotein receptor##NM_001195798|LDLR|3949|low density lipoprotein receptor##NM_001195799|LDLR|3949|low density lipoprotein receptor##NM_001195800|LDLR|3949|low density lipoprotein receptor##NM_001195802|LDLR|3949|low density lipoprotein receptor##NM_001195803|LDLR|3949|low density lipoprotein receptor##AK295612|LDLR|3949|low density lipoprotein receptor##AK296312|LDLR|3949|low density lipoprotein receptor##AK299038|LDLR|3949|low density lipoprotein receptor##AK300313|LDLR|3949|low density lipoprotein receptor##AB209409|LDLR|3949|low density lipoprotein receptor##BC014514|LDLR|3949|low density lipoprotein receptor##AY114155|LDLR|3949|low density lipoprotein receptor##DQ893879|LDLR|3949|low density lipoprotein receptor##BT007361|LDLR|3949|low density lipoprotein receptor	0.931732	CTCF.p2:-10:0.932
chr4	54796315	54796395	reg1001352.p1	16.278	+	AK056823 NM_001126328 TSC_hg19_v1_chr4_-_54457761	-338611	-	BC022983 TSC_hg19_v1_chr4_-_54457654	-338712	-	TSC_hg19_v1_chr4_-_54424402 NM_032622	-371937	-	AB463552 DQ890711 DQ893893 TSC_hg19_v1_chr4_-_54930576	134171	-	TSC_hg19_v1_chr4_-_54930764 AF159423 BC034691	134380	-	TSC_hg19_v1_chr4_-_54930773 AK312427 NM_012110	134442	-	AK056823|LNX1|84708|ligand of numb-protein X 1##NM_001126328|LNX1|84708|ligand of numb-protein X 1##BC022983|LNX1|84708|ligand of numb-protein X 1##NM_032622|LNX1|84708|ligand of numb-protein X 1##DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2##DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2##AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2##BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2##AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	0.032972	
chr20	17598261	17598396	reg1001730.p1	16.276	+	NM_001011546 NM_006870 TSC_hg19_v1_chr20_+_17550756 AK315994 BC009477 AK312645 BX647319 S65738 AK302338	-47589	+	AK316247 BC041483 NM_001161705	-58786	-	AF039655 Y16717 TSC_hg19_v1_chr20_-_17512006 NM_001195	-86336	-	TSC_hg19_v1_chr20_-_17641123 AB287347 AB384598	42808	-	BC128578 BC128577 TSC_hg19_v1_chr20_-_17662793 AF006751	64437	-	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	64555	-	NM_001011546|DSTN|11034|destrin (actin depolymerizing factor)##NM_006870|DSTN|11034|destrin (actin depolymerizing factor)##AK315994|DSTN|11034|destrin (actin depolymerizing factor)##BC009477|DSTN|11034|destrin (actin depolymerizing factor)##AK312645|DSTN|11034|destrin (actin depolymerizing factor)##BX647319|DSTN|11034|destrin (actin depolymerizing factor)##S65738|DSTN|11034|destrin (actin depolymerizing factor)##AK302338|DSTN|11034|destrin (actin depolymerizing factor)##AK316247|BFSP1|631|beaded filament structural protein 1, filensin##BC041483|BFSP1|631|beaded filament structural protein 1, filensin##NM_001161705|BFSP1|631|beaded filament structural protein 1, filensin##AF039655|BFSP1|631|beaded filament structural protein 1, filensin##Y16717|BFSP1|631|beaded filament structural protein 1, filensin##NM_001195|BFSP1|631|beaded filament structural protein 1, filensin##AB287347|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128578|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128577|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AF006751|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)	0.985432	CTCF.p2:14:0.985
chr1	15455148	15455264	reg1001439.p1	16.273	+	AY505122 NM_001017999	-182792	+	AY505121 NM_001018001	-198911	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	-204487	+	AK292184 NM_001136216 NM_001136217 TSC_hg19_v1_chr1_+_15479047	23825	+	AK129922 TSC_hg19_v1_chr1_+_15479310	24098	+	TSC_hg19_v1_chr1_+_15480249 AK001061 NM_001136218 NM_018022 BC000593 BC005177 AK098467	25042	+	AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AK292184|TMEM51|55092|transmembrane protein 51##NM_001136216|TMEM51|55092|transmembrane protein 51##NM_001136217|TMEM51|55092|transmembrane protein 51##AK129922|TMEM51|55092|transmembrane protein 51##AK001061|TMEM51|55092|transmembrane protein 51##NM_001136218|TMEM51|55092|transmembrane protein 51##NM_018022|TMEM51|55092|transmembrane protein 51##BC000593|TMEM51|55092|transmembrane protein 51##BC005177|TMEM51|55092|transmembrane protein 51##AK098467|TMEM51|55092|transmembrane protein 51	0.998255	CTCF.p2:-5:0.998
chr1	36808431	36808558	reg1001877.p1	16.273	+	AK001509 NM_018166	-18740	-	TSC_hg19_v1_chr1_+_36772696 NM_024676 AK297015 AK056459	-35788	+	TSC_hg19_v1_chr1_+_36771968 NM_001162530	-36517	+	TSC_hg19_v1_chr1_-_36817157 AK023810	8680	-	AL834137 NM_032017 BC008344 TSC_hg19_v1_chr1_-_36851499 BC007835 AY198395	42997	-	TSC_hg19_v1_chr1_-_36851517 AK075048	43029	-	AK001509|FAM176B|55194|family with sequence similarity 176, member B##NM_018166|FAM176B|55194|family with sequence similarity 176, member B##NM_024676|SH3D21|79729|SH3 domain containing 21##AK297015|SH3D21|79729|SH3 domain containing 21##AK056459|SH3D21|79729|SH3 domain containing 21##NM_001162530|SH3D21|79729|SH3 domain containing 21##AL834137|STK40|83931|serine/threonine kinase 40##NM_032017|STK40|83931|serine/threonine kinase 40##BC008344|STK40|83931|serine/threonine kinase 40##BC007835|STK40|83931|serine/threonine kinase 40##AY198395|STK40|83931|serine/threonine kinase 40##AK075048|STK40|83931|serine/threonine kinase 40	1.076195	CTCF.p2:-10:0.994
chr18	9971464	9971592	reg1001701.p1	16.273	+	AF044670 TSC_hg19_v1_chr18_+_9914252 AF057358 AF086627 BT019618	-57266	+	TSC_hg19_v1_chr18_+_9914239 AK292948 AF154847	-57305	+	TSC_hg19_v1_chr18_+_9914032 BC002992	-57487	+	BC053324 TSC_hg19_v1_chr18_+_10454599	483042	+	TSC_hg19_v1_chr18_+_10454623 AB056722 AB104887 NM_153000	483094	+	TSC_hg19_v1_chr18_+_10454634 AK300743	483124	+	AF044670|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AF057358|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AF086627|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##BT019618|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AK292948|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AF154847|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##BC002992|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##BC053324|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AB056722|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AB104887|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##NM_153000|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AK300743|APCDD1|147495|adenomatosis polyposis coli down-regulated 1	0.99337	CTCF.p2:-17:0.993
chr3	101948032	101948164	reg1001082.p1	16.271	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-379724	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-401138	+	AK289689 NM_001134456	-449813	+	AY090780 NM_175056 BC143817	205769	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	3137482	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	3137724	+	AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule	0.994552	CTCF.p2:-7:0.995
chr11	71802422	71802561	reg1001631.p1	16.269	+	TSC_hg19_v1_chr11_-_71791740 BC068539	-10742	-	BC004165 TSC_hg19_v1_chr11_-_71791566 BC103765 AB210007 BC027493 BC043499 AK307577 Z11583 Z11584 NM_006185 AB621824	-10975	-	NM_001145307 NM_001145308 NM_001205138 NM_145309	-11115	+	TSC_hg19_v1_chr11_-_71814268 CR457247	11777	-	BC001706 TSC_hg19_v1_chr11_-_71814323 AK000632 AF289583	11822	-	TSC_hg19_v1_chr11_-_71814344 AK300681	11851	-	BC068539|NUMA1|4926|nuclear mitotic apparatus protein 1##BC004165|NUMA1|4926|nuclear mitotic apparatus protein 1##BC103765|NUMA1|4926|nuclear mitotic apparatus protein 1##AB210007|NUMA1|4926|nuclear mitotic apparatus protein 1##BC027493|NUMA1|4926|nuclear mitotic apparatus protein 1##BC043499|NUMA1|4926|nuclear mitotic apparatus protein 1##AK307577|NUMA1|4926|nuclear mitotic apparatus protein 1##Z11583|NUMA1|4926|nuclear mitotic apparatus protein 1##Z11584|NUMA1|4926|nuclear mitotic apparatus protein 1##NM_006185|NUMA1|4926|nuclear mitotic apparatus protein 1##NM_001145307|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing##NM_001145308|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing##NM_001205138|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing##NM_145309|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing##CR457247|LAMTOR1|55004|late endosomal/lysosomal adaptor, MAPK and MTOR activator 1##BC001706|LAMTOR1|55004|late endosomal/lysosomal adaptor, MAPK and MTOR activator 1##AK000632|LAMTOR1|55004|late endosomal/lysosomal adaptor, MAPK and MTOR activator 1##AF289583|LAMTOR1|55004|late endosomal/lysosomal adaptor, MAPK and MTOR activator 1##AK300681|LAMTOR1|55004|late endosomal/lysosomal adaptor, MAPK and MTOR activator 1	1.141148	CTCF.p2:-12:0.925	CTCF.p2:62:0.216
chr5	90522045	90522184	reg1002165.p1	16.267	+	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	-667500	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-696748	-	NM_006467 AK295434 U93868	-751412	+	AK091866 TSC_hg19_v1_chr5_-_90610220	88131	-	TSC_hg19_v1_chr5_+_90676181 BC043415	154048	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	157018	-	AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3	0.571291	CTCF.p2:-6:0.558
chr2	242017941	242018089	reg1001797.p1	16.266	+	NM_001080437	-79761	+	AK056601 NM_001085437	-182443	-	BC125154 BC125155 AK026324 NM_024861 AK096434	-186596	-	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	23711	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	70856	-	AK308015 BC051689 TSC_hg19_v1_chr2_+_242089094	71043	+	NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54##BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase##AK308015|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC051689|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7	0.962333	CTCF.p2:-16:0.962
chr2	46163619	46163755	reg1001623.p1	16.266	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-284613	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-325280	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-368559	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	360904	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	361288	+	NM_001145051	543016	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.073248	
chr8	109930759	109930897	reg1001944.p1	16.265	+	AK055230 NM_153015 BC033057 BC030710	-131022	-	TSC_hg19_v1_chr8_+_109455874 AK290974 D14659 AB384437 CR457402 CU676696 CU692380 HQ447150	-474948	+	TSC_hg19_v1_chr8_+_109455865 BC021667 NM_014673 AK222615 BC007027 BC020753	-474976	+	BC105045 BC113360 NM_003301 X72089 D16845 AY493373 HQ258206 X75071	168868	+	AF283302 AK311583 AF521133 NM_001128211 AK307663	411306	-	AK301278 TSC_hg19_v1_chr8_-_110346317 BC000967 AK027897 BC043406 AK315006 BC031258 NM_032869 AF283301	415543	-	AK055230|TMEM74|157753|transmembrane protein 74##NM_153015|TMEM74|157753|transmembrane protein 74##BC030710|TMEM74|157753|transmembrane protein 74##AK290974|TTC35|9694|tetratricopeptide repeat domain 35##D14659|TTC35|9694|tetratricopeptide repeat domain 35##CR457402|TTC35|9694|tetratricopeptide repeat domain 35##HQ447150|TTC35|9694|tetratricopeptide repeat domain 35##BC021667|TTC35|9694|tetratricopeptide repeat domain 35##NM_014673|TTC35|9694|tetratricopeptide repeat domain 35##AK222615|TTC35|9694|tetratricopeptide repeat domain 35##BC007027|TTC35|9694|tetratricopeptide repeat domain 35##BC020753|TTC35|9694|tetratricopeptide repeat domain 35##BC105045|TRHR|7201|thyrotropin-releasing hormone receptor##BC113360|TRHR|7201|thyrotropin-releasing hormone receptor##NM_003301|TRHR|7201|thyrotropin-releasing hormone receptor##X72089|TRHR|7201|thyrotropin-releasing hormone receptor##D16845|TRHR|7201|thyrotropin-releasing hormone receptor##AY493373|TRHR|7201|thyrotropin-releasing hormone receptor##HQ258206|TRHR|7201|thyrotropin-releasing hormone receptor##X75071|TRHR|7201|thyrotropin-releasing hormone receptor##AF283302|NUDCD1|84955|NudC domain containing 1##AK311583|NUDCD1|84955|NudC domain containing 1##AF521133|NUDCD1|84955|NudC domain containing 1##NM_001128211|NUDCD1|84955|NudC domain containing 1##AK307663|NUDCD1|84955|NudC domain containing 1##AK301278|NUDCD1|84955|NudC domain containing 1##BC000967|NUDCD1|84955|NudC domain containing 1##AK027897|NUDCD1|84955|NudC domain containing 1##BC043406|NUDCD1|84955|NudC domain containing 1##AK315006|NUDCD1|84955|NudC domain containing 1##BC031258|NUDCD1|84955|NudC domain containing 1##NM_032869|NUDCD1|84955|NudC domain containing 1##AF283301|NUDCD1|84955|NudC domain containing 1	0.916462	CTCF.p2:-16:0.916
chr17	40558170	40558290	reg1000989.p2	16.263	+	TSC_hg19_v1_chr17_-_40540580 AK291933	-17638	-	TSC_hg19_v1_chr17_-_40540493 L29277 NM_003150 NM_139276 AK301200 AK316139	-17698	-	TSC_hg19_v1_chr17_-_40540461 BC014482 NM_213662 BC000627 BC029783 AK297994	-17816	-	AB464659 TSC_hg19_v1_chr17_-_40575275 BC008849 AK298072 AK074512 AK092406 AK298563 AK314389 AX747528 BC066123 NM_012232	16997	-	TSC_hg19_v1_chr17_+_40610864 L78933 NM_001130020 NM_001130021 NM_005177 Z71460	52633	+	BC017826 TSC_hg19_v1_chr17_+_40610895 AK223554 AK299784	52655	+	AK291933|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##L29277|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_003150|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_139276|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK301200|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK316139|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC014482|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_213662|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC000627|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC029783|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK297994|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC008849|PTRF|284119|polymerase I and transcript release factor##AK298072|PTRF|284119|polymerase I and transcript release factor##AK074512|PTRF|284119|polymerase I and transcript release factor##AK092406|PTRF|284119|polymerase I and transcript release factor##AK298563|PTRF|284119|polymerase I and transcript release factor##AK314389|PTRF|284119|polymerase I and transcript release factor##BC066123|PTRF|284119|polymerase I and transcript release factor##NM_012232|PTRF|284119|polymerase I and transcript release factor##L78933|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_001130020|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_001130021|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_005177|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##Z71460|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##BC017826|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK223554|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK299784|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1	0.814275	CTCF.p2:8:0.814
chr5	139523920	139524030	reg1001171.p1	16.263	+	BC041380 NM_001007189	-18456	+	TSC_hg19_v1_chr5_+_139493703 M96684 NM_005859 BC110574 BC110594 BC036087 AB464679 BT019388	-30248	+	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	-101130	-	TSC_hg19_v1_chr5_+_139554672 NM_032412	30679	+	TSC_hg19_v1_chr5_+_139554722 BC023982 BC013643 AK225992 AK311640 AK312045 AJ245877	30796	+	AB464063 TSC_hg19_v1_chr5_-_139682672	158689	-	BC041380|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##NM_001007189|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##M96684|PURA|5813|purine-rich element binding protein A##NM_005859|PURA|5813|purine-rich element binding protein A##BC110574|PURA|5813|purine-rich element binding protein A##BC110594|PURA|5813|purine-rich element binding protein A##BC036087|PURA|5813|purine-rich element binding protein A##BT019388|PURA|5813|purine-rich element binding protein A##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2##NM_032412|C5orf32|84418|chromosome 5 open reading frame 32##BC023982|C5orf32|84418|chromosome 5 open reading frame 32##BC013643|C5orf32|84418|chromosome 5 open reading frame 32##AK225992|C5orf32|84418|chromosome 5 open reading frame 32##AK312045|C5orf32|84418|chromosome 5 open reading frame 32##AJ245877|C5orf32|84418|chromosome 5 open reading frame 32	0.996582	CTCF.p2:6:0.997
chr1	25015167	25015277	reg1000982.p1	16.261	+	TSC_hg19_v1_chr1_+_24969795 AF048977 BC017315	-45418	+	TSC_hg19_v1_chr1_+_24969792 AK302498	-45443	+	TSC_hg19_v1_chr1_+_24969763 BC011019 BC036187	-45484	+	NM_013943 TSC_hg19_v1_chr1_+_25071875 AL117424 AK001624 AK095959 BC012444 AF097330	56609	+	TSC_hg19_v1_chr1_+_25071937 AK315051 AK301466 AK307142	56711	+	TSC_hg19_v1_chr1_+_25071976 AF109196 AB463494 AM393644 CU680328 CR533501	56783	+	AF048977|SRRM1|10250|serine/arginine repetitive matrix 1##BC017315|SRRM1|10250|serine/arginine repetitive matrix 1##AK302498|SRRM1|10250|serine/arginine repetitive matrix 1##BC011019|SRRM1|10250|serine/arginine repetitive matrix 1##BC036187|SRRM1|10250|serine/arginine repetitive matrix 1##NM_013943|CLIC4|25932|chloride intracellular channel 4##AL117424|CLIC4|25932|chloride intracellular channel 4##AK001624|CLIC4|25932|chloride intracellular channel 4##AK095959|CLIC4|25932|chloride intracellular channel 4##BC012444|CLIC4|25932|chloride intracellular channel 4##AF097330|CLIC4|25932|chloride intracellular channel 4##AK315051|CLIC4|25932|chloride intracellular channel 4##AK301466|CLIC4|25932|chloride intracellular channel 4##AK307142|CLIC4|25932|chloride intracellular channel 4##AF109196|CLIC4|25932|chloride intracellular channel 4##AM393644|CLIC4|25932|chloride intracellular channel 4##CR533501|CLIC4|25932|chloride intracellular channel 4	0.997929	CTCF.p2:-3:0.998
chr10	100227310	100227452	reg1002409.p1	16.260	+	TSC_hg19_v1_chr10_-_100206705 NM_000195 NM_182639	-20670	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	-20706	-	BC002514 TSC_hg19_v1_chr10_-_100206650	-20735	-	AJ299720 AK094037 BC112356 AF282885 AF282886 AF282887 AJ299719 AK314759 NM_001166244 NM_001166245 NM_001166246 NM_021828	768213	-	TSC_hg19_v1_chr10_+_101088794 NM_020348	861443	+	TSC_hg19_v1_chr10_+_101089114 AK308618	861745	+	NM_000195|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_182639|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1##AJ299720|HPSE2|60495|heparanase 2##AK094037|HPSE2|60495|heparanase 2##BC112356|HPSE2|60495|heparanase 2##AF282885|HPSE2|60495|heparanase 2##AF282886|HPSE2|60495|heparanase 2##AF282887|HPSE2|60495|heparanase 2##AJ299719|HPSE2|60495|heparanase 2##AK314759|HPSE2|60495|heparanase 2##NM_001166244|HPSE2|60495|heparanase 2##NM_001166245|HPSE2|60495|heparanase 2##NM_001166246|HPSE2|60495|heparanase 2##NM_021828|HPSE2|60495|heparanase 2##NM_020348|CNNM1|26507|cyclin M1##AK308618|CNNM1|26507|cyclin M1	0.969705	CTCF.p2:-7:0.970
chr1	111308805	111308910	reg1000514.p2	16.260	+	TSC_hg19_v1_chr1_-_111217626 BC035059 NM_002232	-91217	-	TSC_hg19_v1_chr1_-_111217553 AK314009	-91313	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	-91505	-	NM_001040033 BC035456	104972	+	NM_000560 TSC_hg19_v1_chr1_+_111415769 AK313582 AK298723	106898	+	BC040693 TSC_hg19_v1_chr1_+_111415791 M37033 M60871	106945	+	BC035059|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##NM_002232|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##NM_001040033|CD53|963|CD53 molecule##BC035456|CD53|963|CD53 molecule##NM_000560|CD53|963|CD53 molecule##AK313582|CD53|963|CD53 molecule##AK298723|CD53|963|CD53 molecule##BC040693|CD53|963|CD53 molecule##M37033|CD53|963|CD53 molecule##M60871|CD53|963|CD53 molecule	0.838382	CTCF.p2:4:0.670
chr1	111002993	111003118	reg1001141.p1	16.258	+	AY358683 AF333024 NM_032414 AY029225 BC025399 DQ891570 DQ894763	-9264	+	HQ257924 NM_006402 BC062619	-52529	-	TSC_hg19_v1_chr1_-_110950302 AF029890 AK054769	-52752	-	NM_005549	58741	-	AK290061 NM_004974 TSC_hg19_v1_chr1_-_111148981	145927	-	BC043564 NM_001204269	171040	-	AY358683|PROK1|84432|prokineticin 1##AF333024|PROK1|84432|prokineticin 1##NM_032414|PROK1|84432|prokineticin 1##AY029225|PROK1|84432|prokineticin 1##BC025399|PROK1|84432|prokineticin 1##DQ891570|PROK1|84432|prokineticin 1##DQ894763|PROK1|84432|prokineticin 1##HQ257924|HBXIP|10542|hepatitis B virus x interacting protein##NM_006402|HBXIP|10542|hepatitis B virus x interacting protein##BC062619|HBXIP|10542|hepatitis B virus x interacting protein##AF029890|HBXIP|10542|hepatitis B virus x interacting protein##AK054769|HBXIP|10542|hepatitis B virus x interacting protein##NM_005549|KCNA10|3744|potassium voltage-gated channel, shaker-related subfamily, member 10##AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##BC043564|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_001204269|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2	0.990882	CTCF.p2:10:0.991
chr4	105781796	105781941	reg1001891.p1	16.254	+	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	-365815	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	-369386	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-1140968	-	BX640738 NM_017628	285163	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	285943	+	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	286176	+	AK127778|CXXC4|80319|CXXC finger protein 4##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2	0.930158	CTCF.p2:5:0.930
chr11	64661850	64661962	reg1001246.p1	16.252	+	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	-14745	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	-15752	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	-15924	-	AB384474 TSC_hg19_v1_chr11_-_64684682 AB007864 AK126181 AK300925 AK307684 BC113090 BC113091 BC110650 NM_015104	22757	-	TSC_hg19_v1_chr11_+_64692186 NM_006244 AK092730 AX747693 BC045619	30232	+	BC093960 BC093962 BC101523 AF260739 NM_130769	41440	-	AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AY007161|EHD1|10938|EH-domain containing 1##AB007864|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##AK126181|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##AK300925|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##AK307684|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##BC113090|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##BC113091|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##BC110650|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##NM_015104|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##NM_006244|PPP2R5B|5526|protein phosphatase 2, regulatory subunit B', beta##AK092730|PPP2R5B|5526|protein phosphatase 2, regulatory subunit B', beta##BC045619|PPP2R5B|5526|protein phosphatase 2, regulatory subunit B', beta##BC093960|GPHA2|170589|glycoprotein hormone alpha 2##BC093962|GPHA2|170589|glycoprotein hormone alpha 2##BC101523|GPHA2|170589|glycoprotein hormone alpha 2##AF260739|GPHA2|170589|glycoprotein hormone alpha 2##NM_130769|GPHA2|170589|glycoprotein hormone alpha 2	0.992058	CTCF.p2:6:0.992
chr17	41471438	41471566	reg1001571.p1	16.252	+	AL832479 TSC_hg19_v1_chr17_-_41465694 AK123585 AK311685	-5812	-	TSC_hg19_v1_chr17_+_41363905 AK056132 AK290387 AK299974 AK301571 NM_145041	-107623	+	TSC_hg19_v1_chr17_+_41323230 AK299328 AK290005 AK297425 BC012591 X76952 NM_005899 BC009808 AY450308	-148280	+	TSC_hg19_v1_chr17_+_41476360 NM_001661 AK314951 BC000043 AB060692 L38490	4865	+	AK294046 TSC_hg19_v1_chr17_+_41561351 BC020697 AK303319 D50487 NM_004941 AK291664	89795	+	TSC_hg19_v1_chr17_+_41561383 BC047327 BC044586 AB384688 CU692214	89893	+	AL832479|LOC100130581|100130581|uncharacterized LOC100130581##AK123585|LOC100130581|100130581|uncharacterized LOC100130581##AK311685|LOC100130581|100130581|uncharacterized LOC100130581##AK056132|TMEM106A|113277|transmembrane protein 106A##AK290387|TMEM106A|113277|transmembrane protein 106A##AK299974|TMEM106A|113277|transmembrane protein 106A##AK301571|TMEM106A|113277|transmembrane protein 106A##NM_145041|TMEM106A|113277|transmembrane protein 106A##AK299328|NBR1|4077|neighbor of BRCA1 gene 1##AK290005|NBR1|4077|neighbor of BRCA1 gene 1##AK297425|NBR1|4077|neighbor of BRCA1 gene 1##X76952|NBR1|4077|neighbor of BRCA1 gene 1##NM_005899|NBR1|4077|neighbor of BRCA1 gene 1##BC009808|NBR1|4077|neighbor of BRCA1 gene 1##AY450308|NBR1|4077|neighbor of BRCA1 gene 1##NM_001661|ARL4D|379|ADP-ribosylation factor-like 4D##AK314951|ARL4D|379|ADP-ribosylation factor-like 4D##BC000043|ARL4D|379|ADP-ribosylation factor-like 4D##AB060692|ARL4D|379|ADP-ribosylation factor-like 4D##L38490|ARL4D|379|ADP-ribosylation factor-like 4D##AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC047327|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC044586|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	0.999569	CTCF.p2:-4:1.000
chr7	6556099	6556216	reg1001212.p1	16.252	+	DQ892879 DQ896128 CU675925 CU680460 CU687206 X63745 TSC_hg19_v1_chr7_-_6523784 BC008081 BC012994 BC071982 AK127440 AK315702 NM_001100603 NM_006854	-32389	-	TSC_hg19_v1_chr7_-_6487586 AK075128 AK074744 AF450090 NM_001142936 NM_139179	-68549	-	TSC_hg19_v1_chr7_-_6487567 BC027603 AK074584 AK093958 AK122748 AK301087 AK301104 AX748382 AK298955	-68618	-	NM_001145118	34909	-	TSC_hg19_v1_chr7_+_6617111 AK223532 NM_001134387 NM_001134388 NM_001134389 NM_018106 AK001341 AK308971 AL136674 BC001239 AY359090	60961	+	TSC_hg19_v1_chr7_+_6629662 BC001076 BC005121 AK056149 NM_024067	73629	+	DQ892879|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##DQ896128|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##X63745|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC008081|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC012994|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC071982|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##AK315702|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##NM_001100603|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##NM_006854|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##AK075128|DAGLB|221955|diacylglycerol lipase, beta##AK074744|DAGLB|221955|diacylglycerol lipase, beta##AF450090|DAGLB|221955|diacylglycerol lipase, beta##NM_001142936|DAGLB|221955|diacylglycerol lipase, beta##NM_139179|DAGLB|221955|diacylglycerol lipase, beta##BC027603|DAGLB|221955|diacylglycerol lipase, beta##AK074584|DAGLB|221955|diacylglycerol lipase, beta##AK093958|DAGLB|221955|diacylglycerol lipase, beta##AK122748|DAGLB|221955|diacylglycerol lipase, beta##AK301087|DAGLB|221955|diacylglycerol lipase, beta##AK301104|DAGLB|221955|diacylglycerol lipase, beta##AK298955|DAGLB|221955|diacylglycerol lipase, beta##NM_001145118|GRID2IP|392862|glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein##AK223532|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134387|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134388|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134389|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_018106|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK001341|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK308971|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AL136674|ZDHHC4|55146|zinc finger, DHHC-type containing 4##BC001239|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AY359090|ZDHHC4|55146|zinc finger, DHHC-type containing 4##BC001076|C7orf26|79034|chromosome 7 open reading frame 26##BC005121|C7orf26|79034|chromosome 7 open reading frame 26##AK056149|C7orf26|79034|chromosome 7 open reading frame 26##NM_024067|C7orf26|79034|chromosome 7 open reading frame 26	0.957154	CTCF.p2:-19:0.957
chr22	35420164	35420300	reg1001447.p1	16.251	+	AJ007583 AB011181 NM_004737 NM_133642	-1103862	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-1965877	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-2017506	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	41917	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	233244	+	AK293694 NM_001135729	275035	+	AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)	0.968887	CTCF.p2:-12:0.969
chr2	62684211	62684349	reg1000731.p1	16.251	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-261014	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-551451	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-568494	-	BC047439 AK091902 AX747245 NM_198276	49259	-	AK292545 NM_001142615	216705	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	248686	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.986326	CTCF.p2:-26:0.986
chr3	43419758	43419878	reg1001728.p1	16.245	+	TSC_hg19_v1_chr3_+_43328077 AK291360 NM_001100594 NM_017719 BC071567 AK295187 CR749621 AK314376	-91749	+	TSC_hg19_v1_chr3_-_43147568 BC060861 NM_032806	-272267	-	NM_001129908 AK311059 AK311069 AK091001 AX746726	-399025	+	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	243620	-	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	243695	-	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	312603	+	AK291360|SNRK|54861|SNF related kinase##NM_001100594|SNRK|54861|SNF related kinase##NM_017719|SNRK|54861|SNF related kinase##BC071567|SNRK|54861|SNF related kinase##AK295187|SNRK|54861|SNF related kinase##CR749621|SNRK|54861|SNF related kinase##AK314376|SNRK|54861|SNF related kinase##BC060861|C3orf39|84892|chromosome 3 open reading frame 39##NM_032806|C3orf39|84892|chromosome 3 open reading frame 39##NM_001129908|FAM198A|729085|family with sequence similarity 198, member A##AK311059|FAM198A|729085|family with sequence similarity 198, member A##AK311069|FAM198A|729085|family with sequence similarity 198, member A##AK091001|FAM198A|729085|family with sequence similarity 198, member A##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5	0.0	
chr1	43994911	43995038	reg1001759.p1	16.244	+	TSC_hg19_v1_chr1_-_43919547 AK096244 AY037165 AY775560 NM_001190880 NM_001243526 NM_031207	-75371	-	BC006140 BC019041 TSC_hg19_v1_chr1_-_43919494	-75542	-	TSC_hg19_v1_chr1_+_43855607 BC051343 AK091821 AX747203 AB527118	-139355	+	TSC_hg19_v1_chr1_+_43996556 AB621807 AB177856 NM_002840 NM_130440 Y00815 BC048768 AB177857 BC048416	1630	+	AK127007 TSC_hg19_v1_chr1_+_44064516	69538	+	TSC_hg19_v1_chr1_+_44115796 NM_014663	120825	+	AK096244|HYI|81888|hydroxypyruvate isomerase (putative)##AY037165|HYI|81888|hydroxypyruvate isomerase (putative)##AY775560|HYI|81888|hydroxypyruvate isomerase (putative)##NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)##NM_001243526|HYI|81888|hydroxypyruvate isomerase (putative)##NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)##BC006140|HYI|81888|hydroxypyruvate isomerase (putative)##BC019041|HYI|81888|hydroxypyruvate isomerase (putative)##BC051343|SZT2|23334|seizure threshold 2 homolog (mouse)##AK091821|SZT2|23334|seizure threshold 2 homolog (mouse)##AB177856|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##NM_002840|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##NM_130440|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##Y00815|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##BC048768|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##AB177857|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##BC048416|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##AK127007|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##NM_014663|KDM4A|9682|lysine (K)-specific demethylase 4A	0.472936	CTCF.p2:-2:0.473
chr16	72536138	72536277	reg1001687.p1	16.243	+	AK122925 NM_001160213	-329859	-	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	-330164	-	NM_001142318	-407993	-	TSC_hg19_v1_chr16_+_72699031 AK021563	162857	+	TSC_hg19_v1_chr16_-_72991733 BC029653	455498	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	546014	-	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001142318|TXNL4B|54957|thioredoxin-like 4B##BC029653|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3	0.89595	CTCF.p2:-24:0.896
chr21	46560393	46560519	reg1001535.p1	16.242	+	TSC_hg19_v1_chr21_+_46494502 AY082339 BC030663 NM_001112 NM_001160230 NM_015833 NM_015834 AB194369 AB194370 AB194371 AB194372 AB194373 AF525422 AF533142 AY135659 U76420 U76421 U76422 BC065545 U82120	-65873	+	TSC_hg19_v1_chr21_+_46359968 CU679303	-200487	+	TSC_hg19_v1_chr21_+_46359920 AF391113 AF391114 BC009341 NM_058190	-200531	+	TSC_hg19_v1_chr21_+_46572480 FJ169506	12042	+	TSC_hg19_v1_chr21_-_46707808 BC064623 AJ575591 AL110285 AB023175 AJ302079 AJ302080 AY066015 AK294966 AK290732 AK298080 NM_015227 NM_133635	147345	-	TSC_hg19_v1_chr21_+_46707955 BC022830 BC033767	147519	+	AY082339|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC030663|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001112|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001160230|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015833|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015834|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194369|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194370|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194371|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194372|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194373|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF525422|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF533142|ADARB1|104|adenosine deaminase, RNA-specific, B1##AY135659|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76420|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76421|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76422|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC065545|ADARB1|104|adenosine deaminase, RNA-specific, B1##U82120|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF391113|FAM207A|85395|family with sequence similarity 207, member A##AF391114|FAM207A|85395|family with sequence similarity 207, member A##BC009341|FAM207A|85395|family with sequence similarity 207, member A##NM_058190|FAM207A|85395|family with sequence similarity 207, member A##FJ169506|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC064623|POFUT2|23275|protein O-fucosyltransferase 2##AJ575591|POFUT2|23275|protein O-fucosyltransferase 2##AL110285|POFUT2|23275|protein O-fucosyltransferase 2##AB023175|POFUT2|23275|protein O-fucosyltransferase 2##AJ302079|POFUT2|23275|protein O-fucosyltransferase 2##AJ302080|POFUT2|23275|protein O-fucosyltransferase 2##AY066015|POFUT2|23275|protein O-fucosyltransferase 2##AK294966|POFUT2|23275|protein O-fucosyltransferase 2##AK290732|POFUT2|23275|protein O-fucosyltransferase 2##AK298080|POFUT2|23275|protein O-fucosyltransferase 2##NM_015227|POFUT2|23275|protein O-fucosyltransferase 2##NM_133635|POFUT2|23275|protein O-fucosyltransferase 2##BC022830|LOC642852|642852|uncharacterized LOC642852##BC033767|LOC642852|642852|uncharacterized LOC642852	0.683664	CTCF.p2:-17:0.632
chr9	36103134	36103257	reg1001603.p1	16.242	+	TSC_hg19_v1_chr9_+_36036901 AK292653 NM_021111 AK315073 BC050306 BC032240 BC060806 BC137093 CU687432	-66248	+	HQ258184 BC104869 BC113651 NM_019897	-145073	-	AY358408 NM_001039792	-197007	+	TSC_hg19_v1_chr9_+_36136731 AK074488 BC017918 AK075091 AK298741 AK307243 CR749781 AY039756 NM_022343	33537	+	AK313763 NM_005893 AF333334 BC019251 DQ890826 DQ893980 DQ893982 EU176505 Z46967	66251	+	NM_001076677 NM_001184760 NM_001184761 NM_001184762 NM_001833 NM_007096 TSC_hg19_v1_chr9_+_36190877	87672	+	AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##HQ258184|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC104869|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC113651|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##NM_019897|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##AY358408|HRCT1|646962|histidine rich carboxyl terminus 1##NM_001039792|HRCT1|646962|histidine rich carboxyl terminus 1##AK074488|GLIPR2|152007|GLI pathogenesis-related 2##BC017918|GLIPR2|152007|GLI pathogenesis-related 2##AK075091|GLIPR2|152007|GLI pathogenesis-related 2##AK298741|GLIPR2|152007|GLI pathogenesis-related 2##AK307243|GLIPR2|152007|GLI pathogenesis-related 2##CR749781|GLIPR2|152007|GLI pathogenesis-related 2##AY039756|GLIPR2|152007|GLI pathogenesis-related 2##NM_022343|GLIPR2|152007|GLI pathogenesis-related 2##AK313763|CCIN|881|calicin##NM_005893|CCIN|881|calicin##AF333334|CCIN|881|calicin##BC019251|CCIN|881|calicin##DQ890826|CCIN|881|calicin##DQ893980|CCIN|881|calicin##DQ893982|CCIN|881|calicin##EU176505|CCIN|881|calicin##Z46967|CCIN|881|calicin##NM_001076677|CLTA|1211|clathrin, light chain A##NM_001184760|CLTA|1211|clathrin, light chain A##NM_001184761|CLTA|1211|clathrin, light chain A##NM_001184762|CLTA|1211|clathrin, light chain A##NM_001833|CLTA|1211|clathrin, light chain A##NM_007096|CLTA|1211|clathrin, light chain A	0.964645	CTCF.p2:1:0.965
chr16	56352342	56352459	reg1001639.p1	16.240	+	AK056008 TSC_hg19_v1_chr16_+_56225314	-127090	+	NM_020988 NM_138736 TSC_hg19_v1_chr16_+_56225253	-127149	+	AK294334 NM_001190158	-362458	-	AF124145 TSC_hg19_v1_chr16_-_56459357	106929	-	TSC_hg19_v1_chr16_-_56459390 NM_001144 BC069197	107023	-	AJ001810 CR456919 AB590091 AM392991 AM393219 DQ892142 DQ895336 TSC_hg19_v1_chr16_-_56485242 BC001403 BX647665 NM_007006 AK312721 BX537360	132810	-	AK056008|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_020988|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_138736|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##AK294334|CES5A|221223|carboxylesterase 5A##NM_001190158|CES5A|221223|carboxylesterase 5A##AF124145|AMFR|267|autocrine motility factor receptor##NM_001144|AMFR|267|autocrine motility factor receptor##BC069197|AMFR|267|autocrine motility factor receptor##AJ001810|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##CR456919|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AM392991|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AM393219|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ892142|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ895336|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BC001403|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BX647665|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##NM_007006|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AK312721|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BX537360|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	0.996847	CTCF.p2:8:0.997
chr21	32953208	32953338	reg1001751.p1	16.240	+	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	-21915	-	AB096964 NM_001099219	-542479	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	-699415	-	TSC_hg19_v1_chr21_+_33032005 NM_000454 AK312116 BC001034 X02317 EF151142 AB464254 AY049787 AY450286 BT006676 CR450355 CR541742 CU674512 EF143990	78734	+	AB032998 AK025748 AL117417 TSC_hg19_v1_chr21_-_33074136	120845	-	AL834304 BC052286 BC064990 TSC_hg19_v1_chr21_-_33104271 AK057840 AK308406	150999	-	NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##NM_000454|SOD1|6647|superoxide dismutase 1, soluble##AK312116|SOD1|6647|superoxide dismutase 1, soluble##BC001034|SOD1|6647|superoxide dismutase 1, soluble##X02317|SOD1|6647|superoxide dismutase 1, soluble##EF151142|SOD1|6647|superoxide dismutase 1, soluble##AY049787|SOD1|6647|superoxide dismutase 1, soluble##AY450286|SOD1|6647|superoxide dismutase 1, soluble##BT006676|SOD1|6647|superoxide dismutase 1, soluble##CR450355|SOD1|6647|superoxide dismutase 1, soluble##CR541742|SOD1|6647|superoxide dismutase 1, soluble##EF143990|SOD1|6647|superoxide dismutase 1, soluble##AB032998|SCAF4|57466|SR-related CTD-associated factor 4##AK025748|SCAF4|57466|SR-related CTD-associated factor 4##AL117417|SCAF4|57466|SR-related CTD-associated factor 4##AL834304|SCAF4|57466|SR-related CTD-associated factor 4##BC052286|SCAF4|57466|SR-related CTD-associated factor 4##BC064990|SCAF4|57466|SR-related CTD-associated factor 4##AK057840|SCAF4|57466|SR-related CTD-associated factor 4##AK308406|SCAF4|57466|SR-related CTD-associated factor 4	0.836929	CTCF.p2:3:0.837
chr10	49816309	49816440	reg1002136.p1	16.237	+	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	-3287	-	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	-206702	+	TSC_hg19_v1_chr10_+_49514722 AK292523	-301588	+	TSC_hg19_v1_chr10_-_49864302 AK055937	47931	-	TSC_hg19_v1_chr10_+_49892917 BC034937	76516	+	AK127650 NM_020945	77141	+	BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22##BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##AK292523|MAPK8|5599|mitogen-activated protein kinase 8##AK055937|ARHGAP22|58504|Rho GTPase activating protein 22##BC034937|WDFY4|57705|WDFY family member 4##AK127650|WDFY4|57705|WDFY family member 4##NM_020945|WDFY4|57705|WDFY family member 4	1.014734	CTCF.p2:0:0.993
chr2	30934594	30934717	reg1001336.p1	16.235	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	-264507	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-480153	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-564779	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	95638	-	AK122747 NM_001253827	417842	-	AY358758 AK225808 TSC_hg19_v1_chr2_-_31361308	426643	-	BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AY358758|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AK225808|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.853125	CTCF.p2:-31:0.748
chr5	64080362	64080511	reg1001921.p1	16.235	+	BX647971 TSC_hg19_v1_chr5_+_64064766 NM_005869 AK225161 AK225105 AK308223 AK312954 AY358569 AF039692 BC012117	-15652	+	TSC_hg19_v1_chr5_-_64064491 AK094073 AX748442 NM_173829	-15932	-	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	-15990	-	AY692424 NM_197941 AY692422	697288	-	TSC_hg19_v1_chr5_-_64858996 AF315941 BC005400 BC008504 NM_022145	778528	-	TSC_hg19_v1_chr5_+_64859122 AK025679 AK093675 AK300022 AK298175 AK301654 NM_015342 BC015385 AB384434 CU677289 GQ129262 GQ129263 D38552	778682	+	BX647971|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##NM_005869|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225161|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225105|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK308223|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK312954|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AY358569|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AF039692|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##BC012117|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK094073|SREK1IP1|285672|SREK1-interacting protein 1##NM_173829|SREK1IP1|285672|SREK1-interacting protein 1##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1##AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AF315941|CENPK|64105|centromere protein K##BC005400|CENPK|64105|centromere protein K##BC008504|CENPK|64105|centromere protein K##NM_022145|CENPK|64105|centromere protein K##AK025679|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK300022|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK298175|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK301654|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##NM_015342|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##BC015385|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129262|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129263|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##D38552|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1	0.997682	CTCF.p2:-6:0.998
chr20	48595649	48595799	reg1001538.p1	16.232	+	BX640603 TSC_hg19_v1_chr20_+_48552935 BC066919 AF265215 AK301731 BC013695 AB587558 BT006795	-42781	+	TSC_hg19_v1_chr20_+_48552933 AK315638	-42793	+	TSC_hg19_v1_chr20_+_48552913 AK091976 AK297188 NM_018683	-42810	+	TSC_hg19_v1_chr20_+_48599515 NM_005985 AK313228 BC012910 AF125377 DQ891599 DQ894793 AB464226 AF131208 CU680444	3829	+	BT007382 CU674232 HQ448675 TSC_hg19_v1_chr20_-_48729684 BC000468 BX647511 BX648147 NM_001032288	133966	-	TSC_hg19_v1_chr20_-_48732483 AK314754 NM_022442 BC005215 NM_021988 NM_199144	136764	-	BX640603|RNF114|55905|ring finger protein 114##BC066919|RNF114|55905|ring finger protein 114##AF265215|RNF114|55905|ring finger protein 114##AK301731|RNF114|55905|ring finger protein 114##BC013695|RNF114|55905|ring finger protein 114##BT006795|RNF114|55905|ring finger protein 114##AK315638|RNF114|55905|ring finger protein 114##AK091976|RNF114|55905|ring finger protein 114##AK297188|RNF114|55905|ring finger protein 114##NM_018683|RNF114|55905|ring finger protein 114##NM_005985|SNAI1|6615|snail homolog 1 (Drosophila)##AK313228|SNAI1|6615|snail homolog 1 (Drosophila)##BC012910|SNAI1|6615|snail homolog 1 (Drosophila)##AF125377|SNAI1|6615|snail homolog 1 (Drosophila)##DQ891599|SNAI1|6615|snail homolog 1 (Drosophila)##DQ894793|SNAI1|6615|snail homolog 1 (Drosophila)##AF131208|SNAI1|6615|snail homolog 1 (Drosophila)##BT007382|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##HQ448675|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BC000468|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BX647511|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BX648147|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_001032288|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##AK314754|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_022442|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BC005215|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_021988|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_199144|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	0.999945	CTCF.p2:-22:1.000
chr5	41856897	41857027	reg1001138.p2	16.231	+	AB464014 TSC_hg19_v1_chr5_-_41510701 AK127142 BX648329 NM_001005473	-346284	-	BC035723 NM_001115131	-595423	-	J05024 J04506 AK292509 TSC_hg19_v1_chr5_-_41213635 J05064 AK313673 NM_000065	-643373	-	AB528366 CR457049 CU679223 DQ891805 DQ894989 TSC_hg19_v1_chr5_-_41870488 AK312327	13512	-	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	13621	-	TSC_hg19_v1_chr5_-_41870706 NM_000436	13784	-	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BC035723|C6|729|complement component 6##NM_001115131|C6|729|complement component 6##J05024|C6|729|complement component 6##J04506|C6|729|complement component 6##AK292509|C6|729|complement component 6##J05064|C6|729|complement component 6##AK313673|C6|729|complement component 6##NM_000065|C6|729|complement component 6##CR457049|OXCT1|5019|3-oxoacid CoA transferase 1##DQ891805|OXCT1|5019|3-oxoacid CoA transferase 1##DQ894989|OXCT1|5019|3-oxoacid CoA transferase 1##AK312327|OXCT1|5019|3-oxoacid CoA transferase 1##BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1	0.990972	CTCF.p2:-23:0.991
chr9	130348882	130348990	reg1001249.p1	16.231	+	TSC_hg19_v1_chr9_-_130341311 AF151783 NM_001035534	-7648	-	TSC_hg19_v1_chr9_-_130331353 BC110345 NM_022833 AF192911	-17541	-	AB210016 BC067366 TSC_hg19_v1_chr9_-_130331266	-17731	-	TSC_hg19_v1_chr9_+_130374555 NM_001032221 NM_003165 AK295154 AK293984 AK295802 AF004562 AF004563 BC015749 Y12723 D63851 DQ895426 EU176334 CU677423	25637	+	AK094948 NM_001012502 BC141809	120346	+	HQ257888 TSC_hg19_v1_chr9_-_130477940 BC032117 BC047012 NM_001002913	129006	-	AF151783|FAM129B|64855|family with sequence similarity 129, member B##NM_001035534|FAM129B|64855|family with sequence similarity 129, member B##BC110345|FAM129B|64855|family with sequence similarity 129, member B##NM_022833|FAM129B|64855|family with sequence similarity 129, member B##AF192911|FAM129B|64855|family with sequence similarity 129, member B##AB210016|FAM129B|64855|family with sequence similarity 129, member B##BC067366|FAM129B|64855|family with sequence similarity 129, member B##NM_001032221|STXBP1|6812|syntaxin binding protein 1##NM_003165|STXBP1|6812|syntaxin binding protein 1##AK295154|STXBP1|6812|syntaxin binding protein 1##AK293984|STXBP1|6812|syntaxin binding protein 1##AK295802|STXBP1|6812|syntaxin binding protein 1##AF004562|STXBP1|6812|syntaxin binding protein 1##AF004563|STXBP1|6812|syntaxin binding protein 1##BC015749|STXBP1|6812|syntaxin binding protein 1##Y12723|STXBP1|6812|syntaxin binding protein 1##D63851|STXBP1|6812|syntaxin binding protein 1##DQ895426|STXBP1|6812|syntaxin binding protein 1##EU176334|STXBP1|6812|syntaxin binding protein 1##AK094948|C9orf117|286207|chromosome 9 open reading frame 117##NM_001012502|C9orf117|286207|chromosome 9 open reading frame 117##BC141809|C9orf117|286207|chromosome 9 open reading frame 117##HQ257888|PTRH1|138428|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)##BC047012|PTRH1|138428|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)##NM_001002913|PTRH1|138428|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)	0.998588	CTCF.p2:2:0.999
chr1	203671318	203671462	reg1001401.p1	16.227	+	TSC_hg19_v1_chr1_+_203596243 BC140774	-75158	+	TSC_hg19_v1_chr1_+_203595959 CR936708 CR749393	-75431	+	TSC_hg19_v1_chr1_+_203595922 NM_001001396 NM_001684	-75481	+	NM_001136190 NM_017773 AK301076 TSC_hg19_v1_chr1_+_203734310 AK301421 BC089408 AY090784	62941	+	NM_014827 TSC_hg19_v1_chr1_+_203764762 CR627439 AK095858	93384	+	TSC_hg19_v1_chr1_+_203764804 AK296983	93414	+	BC140774|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR936708|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR749393|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_001001396|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_001684|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_001136190|LAX1|54900|lymphocyte transmembrane adaptor 1##NM_017773|LAX1|54900|lymphocyte transmembrane adaptor 1##AK301076|LAX1|54900|lymphocyte transmembrane adaptor 1##AK301421|LAX1|54900|lymphocyte transmembrane adaptor 1##BC089408|LAX1|54900|lymphocyte transmembrane adaptor 1##AY090784|LAX1|54900|lymphocyte transmembrane adaptor 1##NM_014827|ZC3H11A|9877|zinc finger CCCH-type containing 11A##CR627439|ZC3H11A|9877|zinc finger CCCH-type containing 11A##AK095858|ZC3H11A|9877|zinc finger CCCH-type containing 11A##AK296983|ZC3H11A|9877|zinc finger CCCH-type containing 11A	0.81921	CTCF.p2:23:0.819
chr12	122675542	122675665	reg1001709.p1	16.227	+	TSC_hg19_v1_chr12_+_122667676 NM_001098519	-7929	+	AB590927 BC132998 BC133000 AY499343 NM_001014336	-16869	-	AK124107 NM_152759	-23338	+	AY358940 AK095746 NM_030765 BC031399	12571	+	AB463568 AY313210 TSC_hg19_v1_chr12_-_122710587 DQ893061 DQ896313 AK222664 AF262240 BC011909 AK024768 AK057778 AK315629 BC095468	34978	-	BC046209 NM_019887 NM_138929	36440	-	NM_001098519|LRRC43|254050|leucine rich repeat containing 43##BC132998|IL31|386653|interleukin 31##BC133000|IL31|386653|interleukin 31##AY499343|IL31|386653|interleukin 31##NM_001014336|IL31|386653|interleukin 31##AK124107|LRRC43|254050|leucine rich repeat containing 43##NM_152759|LRRC43|254050|leucine rich repeat containing 43##AY358940|B3GNT4|79369|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4##AK095746|B3GNT4|79369|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4##NM_030765|B3GNT4|79369|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4##BC031399|B3GNT4|79369|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4##AY313210|DIABLO|56616|diablo, IAP-binding mitochondrial protein##DQ893061|DIABLO|56616|diablo, IAP-binding mitochondrial protein##DQ896313|DIABLO|56616|diablo, IAP-binding mitochondrial protein##AK222664|DIABLO|56616|diablo, IAP-binding mitochondrial protein##AF262240|DIABLO|56616|diablo, IAP-binding mitochondrial protein##BC011909|DIABLO|56616|diablo, IAP-binding mitochondrial protein##AK024768|DIABLO|56616|diablo, IAP-binding mitochondrial protein##AK057778|DIABLO|56616|diablo, IAP-binding mitochondrial protein##AK315629|DIABLO|56616|diablo, IAP-binding mitochondrial protein##BC095468|DIABLO|56616|diablo, IAP-binding mitochondrial protein##BC046209|DIABLO|56616|diablo, IAP-binding mitochondrial protein##NM_019887|DIABLO|56616|diablo, IAP-binding mitochondrial protein##NM_138929|DIABLO|56616|diablo, IAP-binding mitochondrial protein	0.591484	CTCF.p2:4:0.591
chr15	79673497	79673622	reg1001630.p1	16.227	+	TSC_hg19_v1_chr15_+_79603557 AJ132270 CR457384	-69992	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	-70056	+	TSC_hg19_v1_chr15_+_79603465 BC111547 BC010853 AK222516 BC022232 AK289434 AK297710 NM_007364 BC017495 AL109672 AY358974 BC000027	-70098	+	AB028947 NM_015206 BC152466	51300	+	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	515821	-	NM_001199758	516067	-	AJ132270|TMED3|23423|transmembrane emp24 protein transport domain containing 3##CR457384|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC111547|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC010853|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK222516|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC022232|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK289434|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK297710|TMED3|23423|transmembrane emp24 protein transport domain containing 3##NM_007364|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC017495|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AL109672|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AY358974|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC000027|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)	0.99736	CTCF.p2:-10:0.997
chr2	110738449	110738584	reg1001562.p1	16.222	+	BC094740 NM_001205288 NM_033514	-82508	+	NM_005054 U64675	-186551	+	AL136868 NM_001037866 NM_001123363 NM_032260	-188182	+	U17077 AB590150 DQ892870 DQ896118 TSC_hg19_v1_chr2_-_110873397 BC003179	134889	-	TSC_hg19_v1_chr2_-_110873536 AK311353	135049	-	TSC_hg19_v1_chr2_-_110873641 AK056616	135128	-	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U17077|MALL|7851|mal, T-cell differentiation protein-like##DQ892870|MALL|7851|mal, T-cell differentiation protein-like##DQ896118|MALL|7851|mal, T-cell differentiation protein-like##BC003179|MALL|7851|mal, T-cell differentiation protein-like##AK311353|MALL|7851|mal, T-cell differentiation protein-like##AK056616|MALL|7851|mal, T-cell differentiation protein-like	0.994818	CTCF.p2:15:0.995
chr5	32232682	32232815	reg1001559.p1	16.222	+	TSC_hg19_v1_chr5_-_32174429 BC033725 AK057544 AK075156 NM_022130	-58317	-	TSC_hg19_v1_chr5_-_32174396 AK092604	-58358	-	TSC_hg19_v1_chr5_-_32174383 AK301588 BC012123 AK293368	-58379	-	AB385495 CU691208 TSC_hg19_v1_chr5_-_32313046 BC057393 AB051469 AY028703	80257	-	TSC_hg19_v1_chr5_-_32313095 AK000483 NM_001040446	80385	-	TSC_hg19_v1_chr5_-_32388605 AK295297	155872	-	BC033725|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK057544|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK075156|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##NM_022130|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK092604|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK301588|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##BC012123|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK293368|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##BC057393|MTMR12|54545|myotubularin related protein 12##AB051469|MTMR12|54545|myotubularin related protein 12##AY028703|MTMR12|54545|myotubularin related protein 12##AK000483|MTMR12|54545|myotubularin related protein 12##NM_001040446|MTMR12|54545|myotubularin related protein 12##AK295297|ZFR|51663|zinc finger RNA binding protein	0.999541	CTCF.p2:-8:1.000
chr12	123436958	123437086	reg1001278.p1	16.221	+	TSC_hg19_v1_chr12_-_123380691 AK022812 NM_024667	-56326	-	TSC_hg19_v1_chr12_-_123380645 BC005882	-56383	-	CU675175 TSC_hg19_v1_chr12_-_123380621	-56407	-	TSC_hg19_v1_chr12_-_123450999 AK027624 AB177852 AB112582 AB112583	13956	-	AF216494 AK304295 TSC_hg19_v1_chr12_-_123451051 NM_001243013 NM_001243014 NM_019624 NM_019625 NM_203444	14025	-	BC009181 BC071172 BC015605 BC047676 AK095481 AK023553 NM_024623 BC033857	22284	+	AK022812|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)##NM_024667|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)##BC005882|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)##AK027624|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##AB177852|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##AB112582|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##AB112583|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##AF216494|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##AK304295|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##NM_001243013|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##NM_001243014|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##NM_019624|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##NM_019625|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##NM_203444|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##BC009181|OGFOD2|79676|2-oxoglutarate and iron-dependent oxygenase domain containing 2##BC071172|OGFOD2|79676|2-oxoglutarate and iron-dependent oxygenase domain containing 2##BC015605|OGFOD2|79676|2-oxoglutarate and iron-dependent oxygenase domain containing 2##BC047676|OGFOD2|79676|2-oxoglutarate and iron-dependent oxygenase domain containing 2##AK095481|OGFOD2|79676|2-oxoglutarate and iron-dependent oxygenase domain containing 2##AK023553|OGFOD2|79676|2-oxoglutarate and iron-dependent oxygenase domain containing 2##NM_024623|OGFOD2|79676|2-oxoglutarate and iron-dependent oxygenase domain containing 2##BC033857|OGFOD2|79676|2-oxoglutarate and iron-dependent oxygenase domain containing 2	0.996808	CTCF.p2:21:0.997
chr7	75921048	75921173	reg1001276.p1	16.221	+	TSC_hg19_v1_chr7_+_75831199 NM_001110199 BC029292	-89905	+	BC001917 TSC_hg19_v1_chr7_+_75677453 AK316587 DQ893080 DQ896341 AK293460 CR536548	-243645	+	AK095803 AK290779 TSC_hg19_v1_chr7_+_75677402	-243708	+	TSC_hg19_v1_chr7_+_75931989 NM_001540 U90906 BC000510 BC012292 AF086135 X54079 AK296890	10799	+	AK311894 TSC_hg19_v1_chr7_+_75931991 BC012768 BC073768 AB020027 AL050380 DQ891304 DQ893349 DQ894489 DQ896669 AB528488 BT019888 CR407614 CR536489 BC014920	10920	+	TSC_hg19_v1_chr7_+_75932877 AK311446	11800	+	NM_001110199|SRRM3|222183|serine/arginine repetitive matrix 3##BC029292|SRRM3|222183|serine/arginine repetitive matrix 3##BC001917|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK316587|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ893080|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ896341|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK293460|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##CR536548|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK095803|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK290779|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##NM_001540|HSPB1|3315|heat shock 27kDa protein 1##U90906|HSPB1|3315|heat shock 27kDa protein 1##BC000510|HSPB1|3315|heat shock 27kDa protein 1##BC012292|HSPB1|3315|heat shock 27kDa protein 1##X54079|HSPB1|3315|heat shock 27kDa protein 1##AK296890|HSPB1|3315|heat shock 27kDa protein 1##AK311894|HSPB1|3315|heat shock 27kDa protein 1##BC012768|HSPB1|3315|heat shock 27kDa protein 1##BC073768|HSPB1|3315|heat shock 27kDa protein 1##AB020027|HSPB1|3315|heat shock 27kDa protein 1##AL050380|HSPB1|3315|heat shock 27kDa protein 1##DQ891304|HSPB1|3315|heat shock 27kDa protein 1##DQ893349|HSPB1|3315|heat shock 27kDa protein 1##DQ894489|HSPB1|3315|heat shock 27kDa protein 1##DQ896669|HSPB1|3315|heat shock 27kDa protein 1##BT019888|HSPB1|3315|heat shock 27kDa protein 1##CR407614|HSPB1|3315|heat shock 27kDa protein 1##CR536489|HSPB1|3315|heat shock 27kDa protein 1##BC014920|HSPB1|3315|heat shock 27kDa protein 1##AK311446|HSPB1|3315|heat shock 27kDa protein 1	0.952117	CTCF.p2:10:0.952
chr6	47065216	47065348	reg1001866.p1	16.217	+	CR627234 BC104214 BC104215 AK026337 AK225460 AB045123 NM_025048 NM_153840 AK095348	-55244	-	AY498875 AL050295 NM_015234	-142679	-	AL832125 AB018301 AK289503 AK092043 AX747330 NM_001098518	-175616	-	TSC_hg19_v1_chr6_-_47253972 BC010241	188700	-	TSC_hg19_v1_chr6_-_47254146 AJ420531	188899	-	AF068868 BT007420 DQ890769 DQ893930 AB590269 BC017730 TSC_hg19_v1_chr6_-_47277283	211982	-	CR627234|GPR110|266977|G protein-coupled receptor 110##BC104214|GPR110|266977|G protein-coupled receptor 110##BC104215|GPR110|266977|G protein-coupled receptor 110##AK026337|GPR110|266977|G protein-coupled receptor 110##AK225460|GPR110|266977|G protein-coupled receptor 110##AB045123|GPR110|266977|G protein-coupled receptor 110##NM_025048|GPR110|266977|G protein-coupled receptor 110##NM_153840|GPR110|266977|G protein-coupled receptor 110##AK095348|GPR110|266977|G protein-coupled receptor 110##AY498875|GPR116|221395|G protein-coupled receptor 116##AL050295|GPR116|221395|G protein-coupled receptor 116##NM_015234|GPR116|221395|G protein-coupled receptor 116##AL832125|GPR116|221395|G protein-coupled receptor 116##AB018301|GPR116|221395|G protein-coupled receptor 116##AK289503|GPR116|221395|G protein-coupled receptor 116##AK092043|GPR116|221395|G protein-coupled receptor 116##NM_001098518|GPR116|221395|G protein-coupled receptor 116##BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AJ420531|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AF068868|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##BT007420|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##DQ890769|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##DQ893930|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##BC017730|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	0.993306	CTCF.p2:-13:0.993
chr1	246166561	246166688	reg1001665.p1	16.216	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-848316	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-1032941	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-1032994	+	AK024733 NM_022743	414087	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	503930	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	503984	-	AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3	0.995603	CTCF.p2:10:0.996
chr13	62932385	62932516	reg1001643.p1	16.216	+	AK289924 NM_022843	-942796	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-943197	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-1960971	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	4872054	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	7750091	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	9507809	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.010029	
chr1	68585996	68586102	reg1001117.p1	16.214	+	BC005362 U96750 NM_004675	-69664	-	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	-286939	-	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	-288061	+	TSC_hg19_v1_chr1_-_68698207 BC137109 BC137113 BC110826 AB097018 AK074984 AK301613 BX648748 BX538320 NM_001002292 NM_001193334 AK074583 AK309779 DQ323735 AY359035 NM_024911	112108	-	AK289925 BC075035 BC075036 NM_000329 U18991	329587	-	CU688044 BC065304 BC011743 BC035506 BC041580 TSC_hg19_v1_chr1_-_68962723	376652	-	BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK124028|LOC100289178|100289178|uncharacterized LOC100289178##BC137109|WLS|79971|wntless homolog (Drosophila)##BC137113|WLS|79971|wntless homolog (Drosophila)##BC110826|WLS|79971|wntless homolog (Drosophila)##AB097018|WLS|79971|wntless homolog (Drosophila)##AK074984|WLS|79971|wntless homolog (Drosophila)##AK301613|WLS|79971|wntless homolog (Drosophila)##BX648748|WLS|79971|wntless homolog (Drosophila)##BX538320|WLS|79971|wntless homolog (Drosophila)##NM_001002292|WLS|79971|wntless homolog (Drosophila)##NM_001193334|WLS|79971|wntless homolog (Drosophila)##AK074583|WLS|79971|wntless homolog (Drosophila)##AK309779|WLS|79971|wntless homolog (Drosophila)##DQ323735|WLS|79971|wntless homolog (Drosophila)##AY359035|WLS|79971|wntless homolog (Drosophila)##NM_024911|WLS|79971|wntless homolog (Drosophila)##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC065304|DEPDC1|55635|DEP domain containing 1##BC011743|DEPDC1|55635|DEP domain containing 1##BC035506|DEPDC1|55635|DEP domain containing 1##BC041580|DEPDC1|55635|DEP domain containing 1	0.980665	CTCF.p2:-15:0.981
chr6	171045558	171045678	reg1001752.p1	16.214	+	AY948416 AY948417 AB587415 DQ893475 DQ896345 TSC_hg19_v1_chr6_-_170893696 S78085 BC082978 AK297343 BC008378 NM_001199462 NM_001199463 NM_001199464 BC067759 NM_001199461 NM_002598 NM_144781	-151889	-	NM_001172085 NM_003194 AK304648 TSC_hg19_v1_chr6_+_170863459 AK315222 BC110341 Z22828 AK298272 M55654 BC109054 BC109053	-182154	+	TSC_hg19_v1_chr6_-_170862392 AK058050 NM_002793	-183221	-	None	None	None	None	None	None	None	None	None	AY948416|PDCD2|5134|programmed cell death 2##AY948417|PDCD2|5134|programmed cell death 2##DQ893475|PDCD2|5134|programmed cell death 2##DQ896345|PDCD2|5134|programmed cell death 2##S78085|PDCD2|5134|programmed cell death 2##AK297343|PDCD2|5134|programmed cell death 2##BC008378|PDCD2|5134|programmed cell death 2##NM_001199462|PDCD2|5134|programmed cell death 2##NM_001199463|PDCD2|5134|programmed cell death 2##NM_001199464|PDCD2|5134|programmed cell death 2##BC067759|PDCD2|5134|programmed cell death 2##NM_001199461|PDCD2|5134|programmed cell death 2##NM_002598|PDCD2|5134|programmed cell death 2##NM_144781|PDCD2|5134|programmed cell death 2##NM_001172085|TBP|6908|TATA box binding protein##NM_003194|TBP|6908|TATA box binding protein##AK304648|TBP|6908|TATA box binding protein##AK315222|TBP|6908|TATA box binding protein##BC110341|TBP|6908|TATA box binding protein##Z22828|TBP|6908|TATA box binding protein##AK298272|TBP|6908|TATA box binding protein##M55654|TBP|6908|TATA box binding protein##BC109054|TBP|6908|TATA box binding protein##BC109053|TBP|6908|TATA box binding protein##AK058050|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##NM_002793|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1	0.899243	CTCF.p2:15:0.883
chr17	57388460	57388593	reg1001793.p1	16.211	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	-90628	+	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	-101129	+	AK225380 TSC_hg19_v1_chr17_+_57233106 AK001891 AK225377 FJ161961 BC008669	-155406	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	20492	+	AF461690 NM_001166301 NM_024612 TSC_hg19_v1_chr17_+_57642970 BC024187 AK299151 AK095681 AF260270 AK226048 AB384723 DQ890909 DQ894060	254461	+	TSC_hg19_v1_chr17_+_57697037 NM_004859	308519	+	NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK225380|PRR11|55771|proline rich 11##AK001891|PRR11|55771|proline rich 11##AK225377|PRR11|55771|proline rich 11##FJ161961|PRR11|55771|proline rich 11##BC008669|PRR11|55771|proline rich 11##NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)##AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_004859|CLTC|1213|clathrin, heavy chain (Hc)	0.057123	
chr14	96027401	96027533	reg1000953.p1	16.210	+	TSC_hg19_v1_chr14_+_96001402 DQ083331	-26034	+	AB223038 TSC_hg19_v1_chr14_+_96001383	-26084	+	TSC_hg19_v1_chr14_+_96001362 BX248075 BC023528 BC047680	-26099	+	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	125311	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	153000	-	AK023027 TSC_hg19_v1_chr14_+_96342762	315278	+	DQ083331|GLRX5|51218|glutaredoxin 5##AB223038|GLRX5|51218|glutaredoxin 5##BX248075|GLRX5|51218|glutaredoxin 5##BC023528|GLRX5|51218|glutaredoxin 5##BC047680|GLRX5|51218|glutaredoxin 5##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##AK023027|LOC100507043|100507043|uncharacterized LOC100507043	0.995985	CTCF.p2:-44:0.996
chr8	20233831	20233960	reg1001316.p1	16.210	+	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	-121149	-	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	-178973	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	-179002	+	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	1411897	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	1412471	-	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	1537270	-	AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa	1.261348	CTCF.p2:-24:0.263	CTCF.p2:35:0.998
chr12	49752568	49752706	reg1001911.p1	16.209	+	BC033236 NM_024902	-11597	+	TSC_hg19_v1_chr12_+_49740718 AK055747	-11934	+	BC110812 AF466366 NM_001008223	-21674	-	TSC_hg19_v1_chr12_+_49760679 AK095582 NM_023071	8052	+	TSC_hg19_v1_chr12_+_49761253 BC017767 AL833614 BC048299 AK292334 AK023202 BX648916 BC032441	8757	+	TSC_hg19_v1_chr12_+_49932842 AB033108 NM_012284 BC144254 BC150602 AB022696 AB384589	180383	+	BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##AK055747|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##BC110812|C1QL4|338761|complement component 1, q subcomponent-like 4##AF466366|C1QL4|338761|complement component 1, q subcomponent-like 4##NM_001008223|C1QL4|338761|complement component 1, q subcomponent-like 4##AK095582|SPATS2|65244|spermatogenesis associated, serine-rich 2##NM_023071|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2##AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2##BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2##AB033108|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##NM_012284|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC144254|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC150602|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AB022696|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3	0.878597	CTCF.p2:-17:0.879
chr12	99437241	99437374	reg1001648.p1	16.209	+	AY356353 AK315954 AM980945 AK294994 TSC_hg19_v1_chr12_-_99288638 AK295988 NM_001204065 NM_001204079 NM_001204080 NM_001204081	-148720	-	AK307509 TSC_hg19_v1_chr12_+_99039067 AF013263 NM_001160 NM_013229 NM_181861 NM_181868 NM_181869	-398310	+	TSC_hg19_v1_chr12_-_99038755 AK123069	-398502	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	111250	-	AK294191 NM_001204067	111560	-	NM_153364 AK312767 BC031221	604223	+	AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK307509|APAF1|317|apoptotic peptidase activating factor 1##AF013263|APAF1|317|apoptotic peptidase activating factor 1##NM_001160|APAF1|317|apoptotic peptidase activating factor 1##NM_013229|APAF1|317|apoptotic peptidase activating factor 1##NM_181861|APAF1|317|apoptotic peptidase activating factor 1##NM_181868|APAF1|317|apoptotic peptidase activating factor 1##NM_181869|APAF1|317|apoptotic peptidase activating factor 1##AK123069|IKBIP|121457|IKBKB interacting protein##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_153364|FAM71C|196472|family with sequence similarity 71, member C##AK312767|FAM71C|196472|family with sequence similarity 71, member C##BC031221|FAM71C|196472|family with sequence similarity 71, member C	0.999786	CTCF.p2:-16:1.000
chr5	149940626	149940740	reg1000453.p2	16.208	+	AK292448 NM_001543 U36600	-52970	+	TSC_hg19_v1_chr5_+_149865341 AB209107	-75244	+	TSC_hg19_v1_chr5_-_149829301 BC003401 BC001126 BC006784 BC110792 AK312179 BC091474 NM_001025070 NM_001025071 NM_005617	-111392	-	TSC_hg19_v1_chr5_+_149980641 AL831818 NM_001166208	39959	+	AK127049 NM_001166209	56522	+	TSC_hg19_v1_chr5_+_150020221 NM_001109974 NM_007286 AK290178 BC042624 BC146665 AB028952 BC152538 BC142683 AF499136 AF499137	79610	+	AK292448|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##NM_001543|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##U36600|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##BC003401|RPS14|6208|ribosomal protein S14##BC001126|RPS14|6208|ribosomal protein S14##BC006784|RPS14|6208|ribosomal protein S14##BC110792|RPS14|6208|ribosomal protein S14##AK312179|RPS14|6208|ribosomal protein S14##BC091474|RPS14|6208|ribosomal protein S14##NM_001025070|RPS14|6208|ribosomal protein S14##NM_001025071|RPS14|6208|ribosomal protein S14##NM_005617|RPS14|6208|ribosomal protein S14##AL831818|SYNPO|11346|synaptopodin##NM_001166208|SYNPO|11346|synaptopodin##AK127049|SYNPO|11346|synaptopodin##NM_001166209|SYNPO|11346|synaptopodin##NM_001109974|SYNPO|11346|synaptopodin##NM_007286|SYNPO|11346|synaptopodin##AK290178|SYNPO|11346|synaptopodin##BC042624|SYNPO|11346|synaptopodin##BC146665|SYNPO|11346|synaptopodin##AB028952|SYNPO|11346|synaptopodin##BC152538|SYNPO|11346|synaptopodin##BC142683|SYNPO|11346|synaptopodin##AF499136|SYNPO|11346|synaptopodin##AF499137|SYNPO|11346|synaptopodin	0.999926	CTCF.p2:-6:1.000
chr10	28670918	28671043	reg1001164.p2	16.206	+	TSC_hg19_v1_chr10_-_28591994 AK315046 AK301592	-79048	-	BC038105 AK057360 NM_173496	-99940	-	AK292521 TSC_hg19_v1_chr10_-_28287879 AK001679 NM_018076 BC085611	-383096	-	BC043365 TSC_hg19_v1_chr10_-_28821677	150615	-	AK055852 TSC_hg19_v1_chr10_+_28821707 AK225846	150726	+	BC001026 TSC_hg19_v1_chr10_+_28821734	150749	+	AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK292521|ARMC4|55130|armadillo repeat containing 4##AK001679|ARMC4|55130|armadillo repeat containing 4##NM_018076|ARMC4|55130|armadillo repeat containing 4##BC085611|ARMC4|55130|armadillo repeat containing 4##BC043365|LOC220906|220906|uncharacterized LOC220906##AK055852|WAC|51322|WW domain containing adaptor with coiled-coil##AK225846|WAC|51322|WW domain containing adaptor with coiled-coil	0.997972	CTCF.p2:13:0.998
chr3	132071528	132071668	reg1001361.p1	16.206	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	-35310	+	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	-35360	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	-317758	-	AB014578 BC151246 TSC_hg19_v1_chr3_+_132136540 AY779857 BC043583 NM_015268	64929	+	AK304461 NM_016557 AK313923 AF110640 BC069438	244510	+	NM_178445	247382	+	M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##AB014578|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC151246|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AY779857|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC043583|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##NM_015268|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AK304461|CCRL1|51554|chemokine (C-C motif) receptor-like 1##NM_016557|CCRL1|51554|chemokine (C-C motif) receptor-like 1##AK313923|CCRL1|51554|chemokine (C-C motif) receptor-like 1##AF110640|CCRL1|51554|chemokine (C-C motif) receptor-like 1##BC069438|CCRL1|51554|chemokine (C-C motif) receptor-like 1##NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1	0.963331	CTCF.p2:-8:0.963
chr20	56229466	56229595	reg1001291.p1	16.205	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	-33992	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	-93373	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	-129329	-	TSC_hg19_v1_chr20_-_56285017 AF305616 AX775889 NM_020182	55459	-	TSC_hg19_v1_chr20_+_56285236 AK056098	55695	+	TSC_hg19_v1_chr20_-_56285634 BC080635 AF224278 AY128643 NM_199169 NM_199170 AX775887 AK296199	56092	-	BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##BC080635|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AF224278|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AY128643|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199169|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199170|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK296199|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	0.671153	CTCF.p2:-15:0.648
chr3	117245452	117245583	reg1001809.p1	16.205	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-1081144	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-1081186	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-1903098	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	1508016	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	1508166	-	AK097667 NM_152538 AK292387	1619380	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.973518	CTCF.p2:3:0.974
chr1	153250466	153250605	reg1001129.p1	16.203	+	BC108290 NM_000427	-18357	+	NM_001195571	-60476	+	NM_001010857 BC130507 BC130511 BC087854	-74594	+	BC128114 BC128115 BC069741 BC069798 BC069801 AY035376 NM_052891	32644	-	AY035377 NM_020393 AF242518	70497	-	AK311882 NM_002965 X06233 TSC_hg19_v1_chr1_+_153330329 BC047681 AF086362	79803	+	BC108290|LOR|4014|loricrin##NM_000427|LOR|4014|loricrin##NM_001195571|PRR9|574414|proline rich 9##NM_001010857|LELP1|149018|late cornified envelope-like proline-rich 1##BC130507|LELP1|149018|late cornified envelope-like proline-rich 1##BC130511|LELP1|149018|late cornified envelope-like proline-rich 1##BC087854|LELP1|149018|late cornified envelope-like proline-rich 1##BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3##BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3##NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035377|PGLYRP4|57115|peptidoglycan recognition protein 4##NM_020393|PGLYRP4|57115|peptidoglycan recognition protein 4##AF242518|PGLYRP4|57115|peptidoglycan recognition protein 4##AK311882|S100A9|6280|S100 calcium binding protein A9##NM_002965|S100A9|6280|S100 calcium binding protein A9##X06233|S100A9|6280|S100 calcium binding protein A9##BC047681|S100A9|6280|S100 calcium binding protein A9##AF086362|S100A9|6280|S100 calcium binding protein A9	0.053636	
chr22	19718305	19718412	reg1000836.p1	16.201	+	NM_000407 J03259	-7291	+	L20860 TSC_hg19_v1_chr22_+_19710169	-8215	+	TSC_hg19_v1_chr22_+_19705998 U59632	-12338	+	AF012130 AF012131 AF373867 NM_005992 NM_080646 NM_080647	25867	+	TSC_hg19_v1_chr22_-_19842337 AK291262 BX640785 BX640969 BX640998	123983	-	TSC_hg19_v1_chr22_-_19842398 BC012060 NM_024627 BC008696 AB051432 AL832509 AF301895 AF238328 AY007378 NM_053004	124047	-	NM_000407|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide##J03259|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide##L20860|SEPT5-GP1BB|100526833|SEPT5-GP1BB readthrough##U59632|SEPT5-GP1BB|100526833|SEPT5-GP1BB readthrough##AF012130|TBX1|6899|T-box 1##AF012131|TBX1|6899|T-box 1##AF373867|TBX1|6899|T-box 1##NM_005992|TBX1|6899|T-box 1##NM_080646|TBX1|6899|T-box 1##NM_080647|TBX1|6899|T-box 1##AK291262|C22orf29|79680|chromosome 22 open reading frame 29##BX640785|C22orf29|79680|chromosome 22 open reading frame 29##BX640969|C22orf29|79680|chromosome 22 open reading frame 29##BX640998|C22orf29|79680|chromosome 22 open reading frame 29##BC012060|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_024627|C22orf29|79680|chromosome 22 open reading frame 29##BC008696|C22orf29|79680|chromosome 22 open reading frame 29##AB051432|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AL832509|C22orf29|79680|chromosome 22 open reading frame 29##AF301895|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AF238328|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AY007378|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_053004|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like	0.90886	CTCF.p2:-15:0.909
chr10	88345314	88345445	reg1001632.p1	16.200	+	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	-63849	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	-63885	-	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	-219116	-	DQ426884 NM_001030015 NM_033282 BC029291 BC113558 BC143688	69015	+	TSC_hg19_v1_chr10_+_88426539 AK294696	81166	+	TSC_hg19_v1_chr10_+_88428170 NM_001171610	82807	+	BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_001030015|OPN4|94233|opsin 4##NM_033282|OPN4|94233|opsin 4##BC029291|OPN4|94233|opsin 4##BC113558|OPN4|94233|opsin 4##BC143688|OPN4|94233|opsin 4##AK294696|LDB3|11155|LIM domain binding 3##NM_001171610|LDB3|11155|LIM domain binding 3	0.982959	CTCF.p2:11:0.983
chr12	54688116	54688238	reg1001651.p1	16.198	+	AK129814 AK303303 AK308679 BC070315 TSC_hg19_v1_chr12_+_54674531 AK222845 BC108266 D28353 AK291113 BC071945 BC078165 BC073162 BC121133 BC074502 BC002355 BC033714 BC052296 BC020442 BC103707 X79536 BC012158 BC075845 U00947 AB463728 CU677924	-13615	+	TSC_hg19_v1_chr12_+_54674509 NM_002136 NM_031157 AK298176 BC009600	-13673	+	TSC_hg19_v1_chr12_-_54673907 NM_012117	-14270	-	TSC_hg19_v1_chr12_-_54689543 AK290555 AK290564 NM_006163 S77763	1362	-	L24122 TSC_hg19_v1_chr12_-_54694667	6480	-	TSC_hg19_v1_chr12_-_54694800 L13974 BC005044 NM_001136023 AK313207	6630	-	AK129814|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##AK303303|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##AK308679|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC070315|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##AK291113|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC071945|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC078165|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC073162|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC121133|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC074502|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC002355|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC033714|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC052296|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC020442|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC103707|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##X79536|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC012158|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##U00947|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##NM_002136|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##NM_031157|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##AK298176|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##BC009600|HNRNPA1|3178|heterogeneous nuclear ribonucleoprotein A1##NM_012117|CBX5|23468|chromobox homolog 5##AK290555|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##AK290564|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##NM_006163|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##S77763|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##L24122|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##L13974|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##BC005044|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##NM_001136023|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##AK313207|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa	0.987187	CTCF.p2:2:0.987
chr17	66773673	66773808	reg1001803.p1	16.195	+	AK056789 BC136686 BC136689 AY358197 NM_001243746 NM_017565 TSC_hg19_v1_chr17_-_66597112	-176717	-	AK298071 TSC_hg19_v1_chr17_-_66596742	-177001	-	TSC_hg19_v1_chr17_+_66508570 BC036285 S54705 AK124586 AK312307 CR749311 M18468 M33336	-265141	+	BC130280 BC143971 BC143972 AK304286 BC010392 AB020629 BC047765 BC094689 AK304360 AK295876 BC037309 BC024003 NM_007168	177716	-	BC062472 AK057068 AY028899 NM_080283	283350	-	BC125231 BC125232 AY028898 NM_080284 TSC_hg19_v1_chr17_-_67138037 BC070125 AK308431 BC029852	364335	-	AK056789|FAM20A|54757|family with sequence similarity 20, member A##BC136686|FAM20A|54757|family with sequence similarity 20, member A##BC136689|FAM20A|54757|family with sequence similarity 20, member A##AY358197|FAM20A|54757|family with sequence similarity 20, member A##NM_001243746|FAM20A|54757|family with sequence similarity 20, member A##NM_017565|FAM20A|54757|family with sequence similarity 20, member A##AK298071|FAM20A|54757|family with sequence similarity 20, member A##BC036285|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##S54705|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK124586|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK312307|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##CR749311|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M18468|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M33336|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	0.999136	CTCF.p2:-14:0.999
chr11	73018424	73018554	reg1001543.p1	16.194	+	BC009391 NM_004154 BC000571 AF218005 X97058 AK311529 U52464	-35150	+	AF007892 AX775903 NM_176798	-37551	+	NM_176796 NM_176797 AF007891	-42913	+	TSC_hg19_v1_chr11_+_73019337 AK074500	915	+	BC137228 NM_014786 AF378754	1176	+	TSC_hg19_v1_chr11_-_73020422 AK300095	1934	-	BC009391|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_004154|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##BC000571|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF218005|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##X97058|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##U52464|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007892|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AX775903|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176798|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176796|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176797|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007891|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK300095|LOC100287837|100287837|uncharacterized LOC100287837	0.53688	CTCF.p2:2:0.537
chr11	73104735	73104851	reg1001103.p2	16.194	+	TSC_hg19_v1_chr11_+_73087683 AF319553 NM_032871	-17102	+	TSC_hg19_v1_chr11_+_73087471 AK027899 NM_152222 BC051810 BC017279	-17356	+	TSC_hg19_v1_chr11_-_73020422 AK300095	-84370	-	D87470 TSC_hg19_v1_chr11_-_73309158 AK292054 EF197985 BC052341 EF363480 NM_015159	204405	-	AF101054 NM_001130033 NM_021200 U89715	252429	+	NM_001130034 NM_001130035 BC008075 AB209716 AK289620 TSC_hg19_v1_chr11_+_73358695 AK296033 AK301299 AF093249 AF100612 AK289909 AK311158	253870	+	AF319553|RELT|84957|RELT tumor necrosis factor receptor##NM_032871|RELT|84957|RELT tumor necrosis factor receptor##AK027899|RELT|84957|RELT tumor necrosis factor receptor##NM_152222|RELT|84957|RELT tumor necrosis factor receptor##BC051810|RELT|84957|RELT tumor necrosis factor receptor##BC017279|RELT|84957|RELT tumor necrosis factor receptor##AK300095|LOC100287837|100287837|uncharacterized LOC100287837##D87470|FAM168A|23201|family with sequence similarity 168, member A##AK292054|FAM168A|23201|family with sequence similarity 168, member A##EF197985|FAM168A|23201|family with sequence similarity 168, member A##BC052341|FAM168A|23201|family with sequence similarity 168, member A##EF363480|FAM168A|23201|family with sequence similarity 168, member A##NM_015159|FAM168A|23201|family with sequence similarity 168, member A##AF101054|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_021200|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##U89715|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130034|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130035|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##BC008075|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AB209716|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289620|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK296033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK301299|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF093249|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF100612|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289909|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK311158|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1	0.998013	CTCF.p2:13:0.998
chr12	132991628	132991752	reg1001369.p3	16.194	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-85833	-	AF458594 NM_021808	-301118	-	TSC_hg19_v1_chr12_+_132629014 BC071958 CU687200 DQ892518 DQ895730 BC007893	-362634	+	NM_001142641	75466	+	NM_001195520	195346	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	203714	+	BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC071958|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ892518|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ895730|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC007893|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##NM_001142641|FBRSL1|57666|fibrosin-like 1##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2	0.661661	CTCF.p2:-14:0.662
chr16	18225543	18225652	reg1001605.p1	16.194	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	-660792	-	TSC_hg19_v1_chr16_+_16326508 AB463143	-1899067	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1899109	+	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	347794	-	TSC_hg19_v1_chr16_-_18798077 AK127316	572499	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	576058	-	AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a	0.050849	
chr15	40714239	40714360	reg1001072.p2	16.192	+	TSC_hg19_v1_chr15_+_40698024 AK315296 BT007145 DQ892577 DQ895793	-16251	+	TSC_hg19_v1_chr15_+_40698004 M34192 BC017202	-16291	+	TSC_hg19_v1_chr15_+_40697995 AK122922	-16313	+	TSC_hg19_v1_chr15_+_40733353 BC022782 NM_014952	19064	+	NM_130468 AB066595 BC049214 TSC_hg19_v1_chr15_+_40763222 BC053633 AF282905 AK074739 CU690606 AF401222 AY358446 BC023653	49043	+	AK092214 AX747411 AL832032 AK098781 TSC_hg19_v1_chr15_-_40857211	142903	-	AK315296|IVD|3712|isovaleryl-CoA dehydrogenase##BT007145|IVD|3712|isovaleryl-CoA dehydrogenase##DQ892577|IVD|3712|isovaleryl-CoA dehydrogenase##DQ895793|IVD|3712|isovaleryl-CoA dehydrogenase##M34192|IVD|3712|isovaleryl-CoA dehydrogenase##BC017202|IVD|3712|isovaleryl-CoA dehydrogenase##AK122922|IVD|3712|isovaleryl-CoA dehydrogenase##BC022782|BAHD1|22893|bromo adjacent homology domain containing 1##NM_014952|BAHD1|22893|bromo adjacent homology domain containing 1##NM_130468|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AB066595|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC049214|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC053633|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AF282905|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AK074739|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AF401222|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AY358446|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC023653|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AK092214|C15orf57|90416|chromosome 15 open reading frame 57##AL832032|C15orf57|90416|chromosome 15 open reading frame 57##AK098781|C15orf57|90416|chromosome 15 open reading frame 57	0.32421	CTCF.p2:4:0.324
chr1	201865156	201865277	reg1001534.p1	16.191	+	TSC_hg19_v1_chr1_+_201858006 BC009558 AY358589 AK294106 BC066977 BC104444 BC104445 EU832101 EU832195 BC061908	-7125	+	AK311191 TSC_hg19_v1_chr1_+_201857806 NM_198149 AK316312 BC111855	-7414	+	TSC_hg19_v1_chr1_+_201798330 AF410465	-66879	+	CU687334 AK126474 BC001755 X54162 AK304700 AK304852 AK311740 BC080187 TSC_hg19_v1_chr1_-_201915677 AK295824	50357	-	NM_012134 TSC_hg19_v1_chr1_-_201915717	50500	-	NM_006335 BC015098 TSC_hg19_v1_chr1_+_201924640 AK315602 BC009784 BC007106 BC020833 X97544 AF106622 BC000294 BC004439 BC013823	59422	+	BC009558|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##AY358589|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##AK294106|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC066977|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC104444|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC104445|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##EU832101|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##EU832195|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC061908|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##AK311191|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##NM_198149|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##AK316312|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC111855|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##AF410465|IPO9|55705|importin 9##AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)##BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)##X54162|LMOD1|25802|leiomodin 1 (smooth muscle)##AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)##BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)##AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)##NM_012134|LMOD1|25802|leiomodin 1 (smooth muscle)##NM_006335|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC015098|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##AK315602|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC009784|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC007106|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC020833|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##X97544|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##AF106622|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC000294|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC004439|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC013823|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)	0.940469	CTCF.p2:-10:0.823
chr3	52481157	52481286	reg1001779.p1	16.186	+	AB029496 BC098104 BC098137 BC099724 NM_020163 TSC_hg19_v1_chr3_-_52479120	-2124	-	AY014283 TSC_hg19_v1_chr3_+_52445005	-36239	+	TSC_hg19_v1_chr3_+_52444675 BC022002 AK292221	-36545	+	CR541865 CR541885 DQ891026 DQ894206 AF020769 TSC_hg19_v1_chr3_-_52488058 BC030244 AK313743 NM_003280 X07897	6833	-	TSC_hg19_v1_chr3_+_52489516 NM_007184	8292	+	TSC_hg19_v1_chr3_+_52489645 AK297657 AK315001 BC038102 AK291398 BC054494 AF082516 BC050552 AK027428	8410	+	AB029496|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##BC098104|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##BC098137|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##BC099724|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##NM_020163|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##AY014283|PHF7|51533|PHD finger protein 7##BC022002|PHF7|51533|PHD finger protein 7##AK292221|PHF7|51533|PHD finger protein 7##CR541865|TNNC1|7134|troponin C type 1 (slow)##CR541885|TNNC1|7134|troponin C type 1 (slow)##DQ891026|TNNC1|7134|troponin C type 1 (slow)##DQ894206|TNNC1|7134|troponin C type 1 (slow)##AF020769|TNNC1|7134|troponin C type 1 (slow)##BC030244|TNNC1|7134|troponin C type 1 (slow)##AK313743|TNNC1|7134|troponin C type 1 (slow)##NM_003280|TNNC1|7134|troponin C type 1 (slow)##X07897|TNNC1|7134|troponin C type 1 (slow)##NM_007184|NISCH|11188|nischarin##AK297657|NISCH|11188|nischarin##AK315001|NISCH|11188|nischarin##BC038102|NISCH|11188|nischarin##AK291398|NISCH|11188|nischarin##BC054494|NISCH|11188|nischarin##AF082516|NISCH|11188|nischarin##BC050552|NISCH|11188|nischarin##AK027428|NISCH|11188|nischarin	0.542622	CTCF.p2:1:0.521
chr7	140217827	140217958	reg1001949.p1	16.184	+	TSC_hg19_v1_chr7_-_140179348 NM_001145125 NM_013446	-38542	-	TSC_hg19_v1_chr7_-_140179306 AF192784 AL136812 AF117233 BC025955	-38622	-	TSC_hg19_v1_chr7_-_140179165 AB209298 AB527778 DQ892404 EU176516 BC064838 AM236048 BC037400 BC051821 BC012398 AK297361 AK315552	-38730	-	BC132875 BC144190 NM_015689	84434	-	AB033103 TSC_hg19_v1_chr7_-_140340614	122718	-	TSC_hg19_v1_chr7_+_140372910 AF131745 AY302592 NM_052853 BC014107	155046	+	NM_001145125|MKRN1|23608|makorin ring finger protein 1##NM_013446|MKRN1|23608|makorin ring finger protein 1##AF192784|MKRN1|23608|makorin ring finger protein 1##AL136812|MKRN1|23608|makorin ring finger protein 1##AF117233|MKRN1|23608|makorin ring finger protein 1##BC025955|MKRN1|23608|makorin ring finger protein 1##AB209298|MKRN1|23608|makorin ring finger protein 1##DQ892404|MKRN1|23608|makorin ring finger protein 1##EU176516|MKRN1|23608|makorin ring finger protein 1##BC064838|MKRN1|23608|makorin ring finger protein 1##AM236048|MKRN1|23608|makorin ring finger protein 1##BC037400|MKRN1|23608|makorin ring finger protein 1##BC051821|MKRN1|23608|makorin ring finger protein 1##BC012398|MKRN1|23608|makorin ring finger protein 1##AK297361|MKRN1|23608|makorin ring finger protein 1##AK315552|MKRN1|23608|makorin ring finger protein 1##BC132875|DENND2A|27147|DENN/MADD domain containing 2A##BC144190|DENND2A|27147|DENN/MADD domain containing 2A##NM_015689|DENND2A|27147|DENN/MADD domain containing 2A##AB033103|DENND2A|27147|DENN/MADD domain containing 2A##AF131745|ADCK2|90956|aarF domain containing kinase 2##AY302592|ADCK2|90956|aarF domain containing kinase 2##NM_052853|ADCK2|90956|aarF domain containing kinase 2##BC014107|ADCK2|90956|aarF domain containing kinase 2	0.998921	CTCF.p2:0:0.999
chr13	30706812	30706938	reg1001204.p1	16.183	+	TSC_hg19_v1_chr13_-_30424811 NM_007106	-282034	-	TSC_hg19_v1_chr13_-_30424719 AK056580	-282173	-	BC059385 BC044582 TSC_hg19_v1_chr13_-_30424481	-282469	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	174276	-	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	174694	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	333118	-	NM_007106|UBL3|5412|ubiquitin-like 3##AK056580|UBL3|5412|ubiquitin-like 3##BC059385|UBL3|5412|ubiquitin-like 3##BC044582|UBL3|5412|ubiquitin-like 3##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1	0.99767	CTCF.p2:-9:0.998
chr22	37825134	37825272	reg1001985.p1	16.183	+	TSC_hg19_v1_chr22_-_37823515 NM_052906	-1675	-	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	-146627	+	TSC_hg19_v1_chr22_+_37678548 AK304453 BC017780	-146666	+	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	57142	-	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	90104	-	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	131270	+	NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2##BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4##AK304453|CYTH4|27128|cytohesin 4##BC017780|CYTH4|27128|cytohesin 4##CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10##NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1	0.862812	CTCF.p2:3:0.863
chr9	131625974	131626116	reg1001165.p2	16.183	+	TSC_hg19_v1_chr9_-_131592074 BC039590 AK303563 AL110193 NM_016390	-33951	-	AF161459 TSC_hg19_v1_chr9_-_131592073	-33973	-	CU687792 BC010579 BC021273 BC046133 TSC_hg19_v1_chr9_-_131592067 BC056890 BC033677 BC063644	-33980	-	TSC_hg19_v1_chr9_-_131644230 BC033685 AK297995 AK314427 BC022468 BC021262 AK291178 NM_001122671 NM_001122672 NM_004059	18219	-	TSC_hg19_v1_chr9_+_131644390 NM_001127245 NM_019594	18338	+	TSC_hg19_v1_chr9_+_131644447 AB037858 BC051322	18407	+	BC039590|C9orf114|51490|chromosome 9 open reading frame 114##AK303563|C9orf114|51490|chromosome 9 open reading frame 114##AL110193|C9orf114|51490|chromosome 9 open reading frame 114##NM_016390|C9orf114|51490|chromosome 9 open reading frame 114##AF161459|C9orf114|51490|chromosome 9 open reading frame 114##BC010579|C9orf114|51490|chromosome 9 open reading frame 114##BC021273|C9orf114|51490|chromosome 9 open reading frame 114##BC046133|C9orf114|51490|chromosome 9 open reading frame 114##BC056890|C9orf114|51490|chromosome 9 open reading frame 114##BC033677|C9orf114|51490|chromosome 9 open reading frame 114##BC063644|C9orf114|51490|chromosome 9 open reading frame 114##BC033685|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##AK297995|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##AK314427|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##BC022468|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##BC021262|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##AK291178|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##NM_001122671|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##NM_001122672|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##NM_004059|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##NM_001127245|LRRC8A|56262|leucine rich repeat containing 8 family, member A##NM_019594|LRRC8A|56262|leucine rich repeat containing 8 family, member A##AB037858|LRRC8A|56262|leucine rich repeat containing 8 family, member A##BC051322|LRRC8A|56262|leucine rich repeat containing 8 family, member A	1.051	CTCF.p2:-18:1.000
chr12	122214175	122214302	reg1001843.p1	16.182	+	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	-63494	+	BC057760 NM_173855	-106679	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	-149595	+	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	17336	-	TSC_hg19_v1_chr12_-_122240852 AK311480	26619	-	TSC_hg19_v1_chr12_+_122242580 NM_015048 JF813787	28373	+	AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_015048|SETD1B|23067|SET domain containing 1B##JF813787|SETD1B|23067|SET domain containing 1B	0.999805	CTCF.p2:0:1.000
chr2	120233925	120234053	reg1001737.p1	16.180	+	TSC_hg19_v1_chr2_+_120189433 NM_183240	-44579	+	M14200 NM_001079863 AM000001	-108792	+	FM213127 NM_001178017	-109161	+	AY462218 CU690190 AB527596 U20178 U28281 TSC_hg19_v1_chr2_-_120281970	47896	-	TSC_hg19_v1_chr2_-_120282018 AK314638 NM_002980	48030	-	TSC_hg19_v1_chr2_-_120282060 BC035757	48074	-	NM_183240|TMEM37|140738|transmembrane protein 37##M14200|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001079863|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##AM000001|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213127|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178017|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##AY462218|SCTR|6344|secretin receptor##U20178|SCTR|6344|secretin receptor##U28281|SCTR|6344|secretin receptor##AK314638|SCTR|6344|secretin receptor##NM_002980|SCTR|6344|secretin receptor##BC035757|SCTR|6344|secretin receptor	0.204052	
chr22	40432739	40432890	reg1001539.p1	16.180	+	TSC_hg19_v1_chr22_+_40390935 BC031099 NM_138435	-41870	+	AK303280 AK303657 AK312830 TSC_hg19_v1_chr22_+_40322634 AK303470	-110190	+	TSC_hg19_v1_chr22_+_40297183 AF129476 AF090456 CR456498 Y18051	-135567	+	TSC_hg19_v1_chr22_+_40440774 NM_001024843	8095	+	TSC_hg19_v1_chr22_+_40441403 BC028626	8618	+	TSC_hg19_v1_chr22_+_40573938 NM_001162501 NM_015088 AK296590 AK294519 AB029016	141185	+	BC031099|FAM83F|113828|family with sequence similarity 83, member F##NM_138435|FAM83F|113828|family with sequence similarity 83, member F##AK303280|GRAP2|9402|GRB2-related adaptor protein 2##AK303657|GRAP2|9402|GRB2-related adaptor protein 2##AK312830|GRAP2|9402|GRB2-related adaptor protein 2##AK303470|GRAP2|9402|GRB2-related adaptor protein 2##AF129476|GRAP2|9402|GRB2-related adaptor protein 2##AF090456|GRAP2|9402|GRB2-related adaptor protein 2##CR456498|GRAP2|9402|GRB2-related adaptor protein 2##Y18051|GRAP2|9402|GRB2-related adaptor protein 2##NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B##BC028626|TNRC6B|23112|trinucleotide repeat containing 6B##NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B##NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B##AK296590|TNRC6B|23112|trinucleotide repeat containing 6B##AK294519|TNRC6B|23112|trinucleotide repeat containing 6B##AB029016|TNRC6B|23112|trinucleotide repeat containing 6B	0.886515	CTCF.p2:12:0.887
chr15	99826753	99826883	reg1001070.p1	16.177	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-35176	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-35402	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-37112	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	279335	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	279376	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	279417	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.221003	CTCF.p2:-5:0.221
chr16	25067034	25067181	reg1001972.p1	16.177	+	TSC_hg19_v1_chr16_-_25026691 AK027567 AK291691 BC080195 AK301500 NM_001006634 NM_018054	-40415	-	AJ306731 AJ306732 TSC_hg19_v1_chr16_-_25026604	-40495	-	AK125358 TSC_hg19_v1_chr16_-_24968918	-98215	-	TSC_hg19_v1_chr16_+_25078227 BC023651 AK093382	11182	+	TSC_hg19_v1_chr16_+_25123062 NM_001032391 NM_016309 AK223364 AF151826 BC001214	55954	+	TSC_hg19_v1_chr16_+_25123102 AK025884 AK225271 AK291885 AK314409 BC014217 AF037601 CU674610 AL137283 CU676933	56090	+	AK027567|ARHGAP17|55114|Rho GTPase activating protein 17##AK291691|ARHGAP17|55114|Rho GTPase activating protein 17##BC080195|ARHGAP17|55114|Rho GTPase activating protein 17##AK301500|ARHGAP17|55114|Rho GTPase activating protein 17##NM_001006634|ARHGAP17|55114|Rho GTPase activating protein 17##NM_018054|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306731|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306732|ARHGAP17|55114|Rho GTPase activating protein 17##AK125358|ARHGAP17|55114|Rho GTPase activating protein 17##BC023651|LOC283887|283887|uncharacterized LOC283887##AK093382|LOC283887|283887|uncharacterized LOC283887##NM_001032391|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_016309|LCMT1|51451|leucine carboxyl methyltransferase 1##AK223364|LCMT1|51451|leucine carboxyl methyltransferase 1##AF151826|LCMT1|51451|leucine carboxyl methyltransferase 1##BC001214|LCMT1|51451|leucine carboxyl methyltransferase 1##AK025884|LCMT1|51451|leucine carboxyl methyltransferase 1##AK225271|LCMT1|51451|leucine carboxyl methyltransferase 1##AK291885|LCMT1|51451|leucine carboxyl methyltransferase 1##AK314409|LCMT1|51451|leucine carboxyl methyltransferase 1##BC014217|LCMT1|51451|leucine carboxyl methyltransferase 1##AF037601|LCMT1|51451|leucine carboxyl methyltransferase 1##AL137283|LCMT1|51451|leucine carboxyl methyltransferase 1	0.995428	CTCF.p2:18:0.995
chr8	22431986	22432134	reg1001565.p1	16.177	+	TSC_hg19_v1_chr8_+_22423258 NM_001018003 AF064807 BC010146	-8823	+	TSC_hg19_v1_chr8_+_22409439 AK303950 AF037261 BC067260	-22607	+	TSC_hg19_v1_chr8_+_22409237 BC091514 NM_005775	-22822	+	AK092968 AX747829 NM_021630	4193	+	TSC_hg19_v1_chr8_+_22436642 AK027800 BC071774 AF289563 BC021556	4646	+	AY007729 AY070438 NM_176871 NM_198042 TSC_hg19_v1_chr8_+_22437993 AY217349 AK024498 DQ893664 EU176702	5990	+	NM_001018003|SORBS3|10174|sorbin and SH3 domain containing 3##AF064807|SORBS3|10174|sorbin and SH3 domain containing 3##BC010146|SORBS3|10174|sorbin and SH3 domain containing 3##AK303950|SORBS3|10174|sorbin and SH3 domain containing 3##AF037261|SORBS3|10174|sorbin and SH3 domain containing 3##BC067260|SORBS3|10174|sorbin and SH3 domain containing 3##BC091514|SORBS3|10174|sorbin and SH3 domain containing 3##NM_005775|SORBS3|10174|sorbin and SH3 domain containing 3##AK092968|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_021630|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK027800|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##BC071774|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AF289563|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##BC021556|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AY007729|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AY070438|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_176871|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_198042|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AY217349|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK024498|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##DQ893664|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##EU176702|PDLIM2|64236|PDZ and LIM domain 2 (mystique)	1.961479	CTCF.p2:-38:0.986	CTCF.p2:45:0.975
chrX	12832700	12832833	reg1001069.p1	16.175	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	-23198	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	-23269	+	AB002314 NM_014728 AK289694	-676176	+	AK313858 BC033651 NM_016562 AF240467 AF245702	52432	+	AK314240 NM_138636 AF246971 AY358296 BC101074 BC101075 BC101076 BC101077 AF245703	91991	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	160474	+	BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7##AK314240|TLR8|51311|toll-like receptor 8##NM_138636|TLR8|51311|toll-like receptor 8##AF246971|TLR8|51311|toll-like receptor 8##AY358296|TLR8|51311|toll-like receptor 8##BC101074|TLR8|51311|toll-like receptor 8##BC101075|TLR8|51311|toll-like receptor 8##BC101076|TLR8|51311|toll-like receptor 8##BC101077|TLR8|51311|toll-like receptor 8##AF245703|TLR8|51311|toll-like receptor 8##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked	0.441243	CTCF.p2:-18:0.441
chr1	184951391	184951511	reg1001219.p1	16.174	+	TSC_hg19_v1_chr1_-_184943680 AF288391 NM_052966	-7762	-	BC018532 AK022527 AY550972 TSC_hg19_v1_chr1_-_184943641 BC030531 AK310557 AK311019 AK127373 AB050477	-7862	-	TSC_hg19_v1_chr1_-_184724031 NM_025191	-227420	-	TSC_hg19_v1_chr1_+_185014449 NM_007212 AF141327	63052	+	TSC_hg19_v1_chr1_+_185014679 AK091574 AX747069 BC012583 AK314793	63223	+	TSC_hg19_v1_chr1_-_185126086 AK226103 CU692260 AF288399 AK074936 BC045535 BC053961 BC026883 BC035430 BC039738 AK098359 AK312801 AK074993 NM_030934	174516	-	AF288391|FAM129A|116496|family with sequence similarity 129, member A##NM_052966|FAM129A|116496|family with sequence similarity 129, member A##BC018532|FAM129A|116496|family with sequence similarity 129, member A##AK022527|FAM129A|116496|family with sequence similarity 129, member A##AY550972|FAM129A|116496|family with sequence similarity 129, member A##BC030531|FAM129A|116496|family with sequence similarity 129, member A##AK310557|FAM129A|116496|family with sequence similarity 129, member A##AK311019|FAM129A|116496|family with sequence similarity 129, member A##AB050477|FAM129A|116496|family with sequence similarity 129, member A##NM_025191|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##NM_007212|RNF2|6045|ring finger protein 2##AF141327|RNF2|6045|ring finger protein 2##AK091574|RNF2|6045|ring finger protein 2##BC012583|RNF2|6045|ring finger protein 2##AK314793|RNF2|6045|ring finger protein 2##AK226103|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AF288399|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK074936|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##BC045535|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##BC053961|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##BC026883|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##BC035430|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##BC039738|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK098359|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK312801|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK074993|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##NM_030934|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like	0.996729	CTCF.p2:12:0.997
chr18	11938007	11938131	reg1001782.p1	16.172	+	AF363484 NM_001242904 NM_023075	-29283	-	AX775853 AX775855 AL833636 TSC_hg19_v1_chr18_-_11908364	-29713	-	BC002877 TSC_hg19_v1_chr18_-_11908317 AK054639 AX775859 DQ786245 BC073994 AK309948 AF289560	-29763	-	TSC_hg19_v1_chr18_+_11981424 AF014398 NM_014214	43360	+	TSC_hg19_v1_chr18_+_11981502 BC031560	43430	+	TSC_hg19_v1_chr18_+_11981575 BC017176 AF200432 BT007061	43541	+	AF363484|MPPE1|65258|metallophosphoesterase 1##NM_001242904|MPPE1|65258|metallophosphoesterase 1##NM_023075|MPPE1|65258|metallophosphoesterase 1##AL833636|MPPE1|65258|metallophosphoesterase 1##BC002877|MPPE1|65258|metallophosphoesterase 1##AK054639|MPPE1|65258|metallophosphoesterase 1##DQ786245|MPPE1|65258|metallophosphoesterase 1##BC073994|MPPE1|65258|metallophosphoesterase 1##AK309948|MPPE1|65258|metallophosphoesterase 1##AF289560|MPPE1|65258|metallophosphoesterase 1##AF014398|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##NM_014214|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BC031560|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BC017176|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##AF200432|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BT007061|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2	0.994903	CTCF.p2:-1:0.995
chr20	42745438	42745548	reg1001148.p2	16.170	+	NM_001098798	-170958	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	-200700	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	-202006	+	AL132999 TSC_hg19_v1_chr20_-_42815818 AK304863	70300	-	BC029957 NM_020433 NM_175913	70724	-	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	93863	-	NM_001098798|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##AL132999|JPH2|57158|junctophilin 2##AK304863|JPH2|57158|junctophilin 2##BC029957|JPH2|57158|junctophilin 2##NM_020433|JPH2|57158|junctophilin 2##NM_175913|JPH2|57158|junctophilin 2##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111	0.892885	CTCF.p2:-8:0.893
chr2	241453401	241453521	reg1001205.p1	16.170	+	TSC_hg19_v1_chr2_+_241375269 AK223516 BC045712	-78196	+	TSC_hg19_v1_chr2_+_241375207 BC027997	-78250	+	TSC_hg19_v1_chr2_+_241375079 BC051279 NM_002081 X54232	-78381	+	AK125881 TSC_hg19_v1_chr2_-_241495084	41569	-	AB034636 BC073146 BC036111 TSC_hg19_v1_chr2_-_241497400	43922	-	AK000506 AK225534 NM_016552 NM_017844 TSC_hg19_v1_chr2_-_241497404	43943	-	AK223516|GPC1|2817|glypican 1##BC045712|GPC1|2817|glypican 1##BC027997|GPC1|2817|glypican 1##BC051279|GPC1|2817|glypican 1##NM_002081|GPC1|2817|glypican 1##X54232|GPC1|2817|glypican 1##AK125881|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AB034636|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##BC073146|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##BC036111|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK000506|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK225534|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_016552|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_017844|ANKMY1|51281|ankyrin repeat and MYND domain containing 1	0.841669	CTCF.p2:-20:0.842
chr12	13069292	13069408	reg1001225.p1	16.169	+	TSC_hg19_v1_chr12_+_13044495 AF506289 AF095448 BC003665 AK291171	-24825	+	AK001761 TSC_hg19_v1_chr12_+_13044469	-24939	+	NM_003979	-25395	+	AB099817 AF209923 BC069341 BC107077 BC107078 NM_018654	33967	-	AF167473 BT007294 DQ892338 DQ895543 BC016277 AF117615 TSC_hg19_v1_chr12_-_13153173	83760	-	TSC_hg19_v1_chr12_-_13153227 AK289877 NM_015987	83886	-	AF506289|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AF095448|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##BC003665|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AK291171|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AK001761|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##NM_003979|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AB099817|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##AF209923|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##BC069341|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##BC107077|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##BC107078|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##NM_018654|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##AF167473|HEBP1|50865|heme binding protein 1##BT007294|HEBP1|50865|heme binding protein 1##DQ892338|HEBP1|50865|heme binding protein 1##DQ895543|HEBP1|50865|heme binding protein 1##BC016277|HEBP1|50865|heme binding protein 1##AF117615|HEBP1|50865|heme binding protein 1##AK289877|HEBP1|50865|heme binding protein 1##NM_015987|HEBP1|50865|heme binding protein 1	0.998962	CTCF.p2:-9:0.999
chr4	70747011	70747134	reg1001466.p1	16.167	+	S77383 Y11195 AK310845 U08098 TSC_hg19_v1_chr4_-_70725864 BC027956 NM_005420	-21242	-	BC010895 NM_014465	-120643	-	AK314209 AK304249 NM_001252274 NM_001252275 NM_006798	-228107	-	NM_001025104 NM_001890 X78416 BC128227 BC128228 U23157	49736	+	X55739 BC069554 BC096194 BC096195 BC096196 BC096197 NM_001891 X17070	79646	-	NM_001009181 NM_003154 AK311812 AX772840 BC067219 M18078 M18371	114602	+	S77383|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##Y11195|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##AK310845|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##U08098|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##BC027956|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##NM_005420|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##BC010895|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1##NM_014465|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1##AK314209|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##AK304249|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252274|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252275|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_006798|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001025104|CSN1S1|1446|casein alpha s1##NM_001890|CSN1S1|1446|casein alpha s1##X78416|CSN1S1|1446|casein alpha s1##BC128227|CSN1S1|1446|casein alpha s1##BC128228|CSN1S1|1446|casein alpha s1##U23157|CSN1S1|1446|casein alpha s1##X55739|CSN2|1447|casein beta##BC069554|CSN2|1447|casein beta##BC096194|CSN2|1447|casein beta##BC096195|CSN2|1447|casein beta##BC096196|CSN2|1447|casein beta##BC096197|CSN2|1447|casein beta##NM_001891|CSN2|1447|casein beta##X17070|CSN2|1447|casein beta##NM_001009181|STATH|6779|statherin##NM_003154|STATH|6779|statherin##AK311812|STATH|6779|statherin##BC067219|STATH|6779|statherin##M18078|STATH|6779|statherin##M18371|STATH|6779|statherin	0.737392	CTCF.p2:12:0.737
chr10	79401680	79401803	reg1001735.p1	16.166	+	BC009695 AK098326 TSC_hg19_v1_chr10_-_79397567 BC062659 BC024965 NM_001014797 NM_001161352 NM_001161353 NM_002247	-4178	-	U13913 BC137115 BC137137 BC144496 CR627384 TSC_hg19_v1_chr10_-_79397499	-4255	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	-4335	-	TSC_hg19_v1_chr10_-_79628871 BC117695	227168	-	AB384502 NM_004747 AB011155 BC146794 TSC_hg19_v1_chr10_-_79686514	284661	-	AF021351 AY091459 AB384941 TSC_hg19_v1_chr10_-_79789272 BC041089 AK300329	387480	-	BC009695|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC062659|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC024965|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001014797|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161352|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161353|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_002247|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)##NM_004747|DLG5|9231|discs, large homolog 5 (Drosophila)##AB011155|DLG5|9231|discs, large homolog 5 (Drosophila)##BC146794|DLG5|9231|discs, large homolog 5 (Drosophila)##AF021351|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AY091459|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC041089|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AK300329|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa	0.998217	CTCF.p2:17:0.998
chr7	26416760	26416883	reg1001189.p1	16.164	+	AK309162 NM_001199838	-12877	+	NM_001199837 AK307905	-16293	+	TSC_hg19_v1_chr7_+_26331633 BC031050 AK312850 AK296142	-85174	+	TSC_hg19_v1_chr7_+_26438248 AK056484	21441	+	AK093321 AX748054 NM_001145531	260668	+	AF072166 AJ004886 AB528968 DQ892896 DQ896144 AB014486 TSC_hg19_v1_chr7_-_26904210 BC002893 AK222885 AK313209 BC036044 AF051323 NM_003930	487372	-	AK309162|SNX10|29887|sorting nexin 10##NM_001199838|SNX10|29887|sorting nexin 10##NM_001199837|SNX10|29887|sorting nexin 10##AK307905|SNX10|29887|sorting nexin 10##BC031050|SNX10|29887|sorting nexin 10##AK312850|SNX10|29887|sorting nexin 10##AK296142|SNX10|29887|sorting nexin 10##AK056484|LOC441204|441204|uncharacterized LOC441204##AK093321|C7orf71|285941|chromosome 7 open reading frame 71##NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71##AF072166|SKAP2|8935|src kinase associated phosphoprotein 2##AJ004886|SKAP2|8935|src kinase associated phosphoprotein 2##DQ892896|SKAP2|8935|src kinase associated phosphoprotein 2##DQ896144|SKAP2|8935|src kinase associated phosphoprotein 2##AB014486|SKAP2|8935|src kinase associated phosphoprotein 2##BC002893|SKAP2|8935|src kinase associated phosphoprotein 2##AK222885|SKAP2|8935|src kinase associated phosphoprotein 2##AK313209|SKAP2|8935|src kinase associated phosphoprotein 2##BC036044|SKAP2|8935|src kinase associated phosphoprotein 2##AF051323|SKAP2|8935|src kinase associated phosphoprotein 2##NM_003930|SKAP2|8935|src kinase associated phosphoprotein 2	0.950638	CTCF.p2:-11:0.951
chr11	67427023	67427134	reg1000931.p2	16.162	+	AY032593 AY040761 AY169233 BC008689 NM_080658	-8960	-	BC113485 BC113487 AY229977 NM_005995	-20051	-	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	-29675	-	AK299956 TSC_hg19_v1_chr11_-_67442068	14965	-	TSC_hg19_v1_chr11_-_67442086 AK309277 NM_000695 AK092464	15053	-	BC007685 NM_001031615	21606	-	AY032593|ACY3|91703|aspartoacylase (aminocyclase) 3##AY040761|ACY3|91703|aspartoacylase (aminocyclase) 3##AY169233|ACY3|91703|aspartoacylase (aminocyclase) 3##BC008689|ACY3|91703|aspartoacylase (aminocyclase) 3##NM_080658|ACY3|91703|aspartoacylase (aminocyclase) 3##BC113485|TBX10|347853|T-box 10##BC113487|TBX10|347853|T-box 10##AY229977|TBX10|347853|T-box 10##NM_005995|TBX10|347853|T-box 10##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##AK299956|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	0.957154	CTCF.p2:4:0.957
chr14	75920724	75920864	reg1001387.p1	16.162	+	BC051303 NM_001135049	-21958	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	-25781	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	-26153	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	67996	+	TSC_hg19_v1_chr14_+_75988840 D42106	68058	+	NM_017791 AY260572 AY260577 BC019087 AK000378	124171	+	BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	0.410261	CTCF.p2:19:0.410
chr1	11898856	11898977	reg1001001.p1	16.159	+	TSC_hg19_v1_chr1_+_11866302 BC050457 HQ258635 X96391 X99473 X99474 X99475	-32591	+	TSC_hg19_v1_chr1_+_11866297 AK289999 D28475 X83378 BC117420 BC117424 BC143844 AK294764 AK307098	-32646	+	NM_001286 NM_021735 NM_021736 NM_021737 TSC_hg19_v1_chr1_+_11866223	-32697	+	AB528342 DQ893115 DQ896389 EU176780 M30262 TSC_hg19_v1_chr1_-_11907841 BC005893 NM_006172	8875	-	CR541976 CR542003 BC025785 M25296 NM_002521	20024	-	TSC_hg19_v1_chr1_-_11986485 BC035033 AB095933 NM_138346	87557	-	BC050457|CLCN6|1185|chloride channel 6##HQ258635|CLCN6|1185|chloride channel 6##X96391|CLCN6|1185|chloride channel 6##X99473|CLCN6|1185|chloride channel 6##X99474|CLCN6|1185|chloride channel 6##X99475|CLCN6|1185|chloride channel 6##AK289999|CLCN6|1185|chloride channel 6##D28475|CLCN6|1185|chloride channel 6##X83378|CLCN6|1185|chloride channel 6##BC117420|CLCN6|1185|chloride channel 6##BC117424|CLCN6|1185|chloride channel 6##BC143844|CLCN6|1185|chloride channel 6##AK294764|CLCN6|1185|chloride channel 6##AK307098|CLCN6|1185|chloride channel 6##NM_001286|CLCN6|1185|chloride channel 6##NM_021735|CLCN6|1185|chloride channel 6##NM_021736|CLCN6|1185|chloride channel 6##NM_021737|CLCN6|1185|chloride channel 6##DQ893115|NPPA|4878|natriuretic peptide A##DQ896389|NPPA|4878|natriuretic peptide A##EU176780|NPPA|4878|natriuretic peptide A##M30262|NPPA|4878|natriuretic peptide A##BC005893|NPPA|4878|natriuretic peptide A##NM_006172|NPPA|4878|natriuretic peptide A##CR541976|NPPB|4879|natriuretic peptide B##CR542003|NPPB|4879|natriuretic peptide B##BC025785|NPPB|4879|natriuretic peptide B##M25296|NPPB|4879|natriuretic peptide B##NM_002521|NPPB|4879|natriuretic peptide B##BC035033|KIAA2013|90231|KIAA2013##AB095933|KIAA2013|90231|KIAA2013##NM_138346|KIAA2013|90231|KIAA2013	0.999764	CTCF.p2:-12:1.000
chr9	33466749	33466871	reg1001346.p1	16.159	+	AK026193 TSC_hg19_v1_chr9_-_33465258	-1586	-	BT007199 CR541991 CR542025 TSC_hg19_v1_chr9_-_33447592 AJ493597 BC013566 AB001325 AK292208 AK303206 AK315760 AK095363 NM_004925	-19224	-	AK297860 TSC_hg19_v1_chr9_-_33402631 AK301949	-64198	-	TSC_hg19_v1_chr9_-_33473861 BC030139	7043	-	TSC_hg19_v1_chr9_-_33473890 BC020450 AK026258 AK293969	7086	-	TSC_hg19_v1_chr9_-_33473921 NM_022917 NM_139235	7120	-	AK026193|NOL6|65083|nucleolar protein family 6 (RNA-associated)##BT007199|AQP3|360|aquaporin 3 (Gill blood group)##CR541991|AQP3|360|aquaporin 3 (Gill blood group)##CR542025|AQP3|360|aquaporin 3 (Gill blood group)##AJ493597|AQP3|360|aquaporin 3 (Gill blood group)##BC013566|AQP3|360|aquaporin 3 (Gill blood group)##AB001325|AQP3|360|aquaporin 3 (Gill blood group)##AK292208|AQP3|360|aquaporin 3 (Gill blood group)##AK303206|AQP3|360|aquaporin 3 (Gill blood group)##AK315760|AQP3|360|aquaporin 3 (Gill blood group)##AK095363|AQP3|360|aquaporin 3 (Gill blood group)##NM_004925|AQP3|360|aquaporin 3 (Gill blood group)##AK297860|AQP7|364|aquaporin 7##AK301949|AQP7|364|aquaporin 7##BC030139|NOL6|65083|nucleolar protein family 6 (RNA-associated)##BC020450|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AK026258|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AK293969|NOL6|65083|nucleolar protein family 6 (RNA-associated)##NM_022917|NOL6|65083|nucleolar protein family 6 (RNA-associated)##NM_139235|NOL6|65083|nucleolar protein family 6 (RNA-associated)	0.922945	CTCF.p2:-1:0.923
chr10	133836671	133836809	reg1002058.p1	16.158	+	TSC_hg19_v1_chr10_-_133795461 BC067818	-41271	-	CU692440 AB528671 U15174 BC009342 BC080643 TSC_hg19_v1_chr10_-_133795428 AK222626 AK295136 BC021989 AF002697 NM_004052	-41364	-	BC042951 NM_174937 TSC_hg19_v1_chr10_-_133110013	-726739	-	NM_001105521	81572	+	TSC_hg19_v1_chr10_+_134000451 AB006713 NM_006426 BC142974 BC029280 Y10976 BC136329 BC136330	163699	+	TSC_hg19_v1_chr10_-_134121455 AY098866 NM_173575	284709	-	BC067818|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##U15174|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC009342|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC080643|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK222626|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK295136|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC021989|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AF002697|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_004052|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC042951|TCERG1L|256536|transcription elongation regulator 1-like##NM_174937|TCERG1L|256536|transcription elongation regulator 1-like##NM_001105521|JAKMIP3|282973|Janus kinase and microtubule interacting protein 3##AB006713|DPYSL4|10570|dihydropyrimidinase-like 4##NM_006426|DPYSL4|10570|dihydropyrimidinase-like 4##BC142974|DPYSL4|10570|dihydropyrimidinase-like 4##BC029280|DPYSL4|10570|dihydropyrimidinase-like 4##Y10976|DPYSL4|10570|dihydropyrimidinase-like 4##BC136329|DPYSL4|10570|dihydropyrimidinase-like 4##BC136330|DPYSL4|10570|dihydropyrimidinase-like 4##AY098866|STK32C|282974|serine/threonine kinase 32C##NM_173575|STK32C|282974|serine/threonine kinase 32C	0.956684	CTCF.p2:9:0.957
chr19	17010600	17010730	reg1001977.p1	16.158	+	AK092632 TSC_hg19_v1_chr19_-_17007756 AK124052	-2917	-	TSC_hg19_v1_chr19_+_16999929 BC074782 AF080214 AY431102	-10730	+	TSC_hg19_v1_chr19_+_16999830 AF055917 NM_003950	-10840	+	AK075099 TSC_hg19_v1_chr19_-_17014494	3788	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	126875	-	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	175656	-	AK092632|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK124052|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC074782|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AF080214|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AY431102|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AF055917|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##NM_003950|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AK075099|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8	0.22682	CTCF.p2:-2:0.227
chr15	22462123	22462303	reg1000586.p4	16.153	+	BC136597 BC136598 NM_001005241 DQ786223	-79768	+	BC136985 NM_001004719	-93736	+	NM_207355 BC066981	-379075	-	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	11009	-	AK097517 NM_001001413	274032	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	371257	+	BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5	5.72109	CTCF.p2:-19:0.992	CTCF.p2:19:0.998	CTCF.p2:-58:0.865	CTCF.p2:58:0.999	CTCF.p2:78:0.878	CTCF.p2:-97:0.920
chr3	140824756	140824860	reg1000927.p2	16.152	+	AF403029 BC008324 NM_080862 AK056367	-54051	+	TSC_hg19_v1_chr3_+_140770412 BC051354	-54330	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	-164041	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	125878	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	218248	+	TSC_hg19_v1_chr3_+_141087345 AK311501	262549	+	AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38	0.992576	CTCF.p2:1:0.976
chr5	138758123	138758263	reg1001925.p1	16.152	+	BC040037 BC050563 NM_194296 AK098740	-18428	-	NM_001161546	-27309	-	GQ477350 DQ892627 EU176703 AK057549 AK292706 BC009931 BC021275 AF151024 NM_016459	-32619	-	BC030162 TSC_hg19_v1_chr5_-_138775145 AK024054	16958	-	AK308138 TSC_hg19_v1_chr5_-_138775199	17001	-	NM_152686 TSC_hg19_v1_chr5_-_138775215	17022	-	BC040037|SPATA24|202051|spermatogenesis associated 24##BC050563|SPATA24|202051|spermatogenesis associated 24##NM_194296|SPATA24|202051|spermatogenesis associated 24##AK098740|SPATA24|202051|spermatogenesis associated 24##NM_001161546|C5orf65|389333|chromosome 5 open reading frame 65##GQ477350|MZB1|51237|marginal zone B and B1 cell-specific protein##DQ892627|MZB1|51237|marginal zone B and B1 cell-specific protein##EU176703|MZB1|51237|marginal zone B and B1 cell-specific protein##AK057549|MZB1|51237|marginal zone B and B1 cell-specific protein##AK292706|MZB1|51237|marginal zone B and B1 cell-specific protein##BC009931|MZB1|51237|marginal zone B and B1 cell-specific protein##BC021275|MZB1|51237|marginal zone B and B1 cell-specific protein##AF151024|MZB1|51237|marginal zone B and B1 cell-specific protein##NM_016459|MZB1|51237|marginal zone B and B1 cell-specific protein##BC030162|DNAJC18|202052|DnaJ (Hsp40) homolog, subfamily C, member 18##AK308138|DNAJC18|202052|DnaJ (Hsp40) homolog, subfamily C, member 18##NM_152686|DNAJC18|202052|DnaJ (Hsp40) homolog, subfamily C, member 18	0.353912	CTCF.p2:-19:0.354
chr1	167657278	167657398	reg1001047.p2	16.151	+	TSC_hg19_v1_chr1_+_167599557 AL137762 BC101536 BC101562 BC143428	-57769	+	AF545852 TSC_hg19_v1_chr1_+_167599495 NM_052862 AK130798	-57925	+	TSC_hg19_v1_chr1_-_167523043 NM_003851	-134275	-	TSC_hg19_v1_chr1_+_167691226 NM_001146191 NM_003953 NM_024569 AK297112 AK075334 AK307250 AK291249 AY359019 AF181660 AF478447 BC000984 BC007881 AF095727 AF087020 AF092425 AF095726 AK315546 AB527648 AF239756 BT019542 CR542160 HQ447352	33990	+	BC117366 BC117372 AF176813 AF299350 AF331033 AK310395 AK310531 AK302884 NM_001167749 NM_018417	226009	-	AB528078 AM393085 CR407632 CR533473 TSC_hg19_v1_chr1_-_167905197 BC104157 BC104158	247804	-	AL137762|RCSD1|92241|RCSD domain containing 1##BC101536|RCSD1|92241|RCSD domain containing 1##BC101562|RCSD1|92241|RCSD domain containing 1##BC143428|RCSD1|92241|RCSD domain containing 1##AF545852|RCSD1|92241|RCSD domain containing 1##NM_052862|RCSD1|92241|RCSD domain containing 1##NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1##NM_001146191|MPZL1|9019|myelin protein zero-like 1##NM_003953|MPZL1|9019|myelin protein zero-like 1##NM_024569|MPZL1|9019|myelin protein zero-like 1##AK297112|MPZL1|9019|myelin protein zero-like 1##AK075334|MPZL1|9019|myelin protein zero-like 1##AK307250|MPZL1|9019|myelin protein zero-like 1##AK291249|MPZL1|9019|myelin protein zero-like 1##AY359019|MPZL1|9019|myelin protein zero-like 1##AF181660|MPZL1|9019|myelin protein zero-like 1##AF478447|MPZL1|9019|myelin protein zero-like 1##BC000984|MPZL1|9019|myelin protein zero-like 1##BC007881|MPZL1|9019|myelin protein zero-like 1##AF095727|MPZL1|9019|myelin protein zero-like 1##AF087020|MPZL1|9019|myelin protein zero-like 1##AF092425|MPZL1|9019|myelin protein zero-like 1##AF095726|MPZL1|9019|myelin protein zero-like 1##AK315546|MPZL1|9019|myelin protein zero-like 1##AF239756|MPZL1|9019|myelin protein zero-like 1##BT019542|MPZL1|9019|myelin protein zero-like 1##CR542160|MPZL1|9019|myelin protein zero-like 1##HQ447352|MPZL1|9019|myelin protein zero-like 1##BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)##BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)##AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)##AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)##AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)##AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)##AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)##AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)##NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)##NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)##AM393085|BRP44|25874|brain protein 44##CR407632|BRP44|25874|brain protein 44##CR533473|BRP44|25874|brain protein 44##BC104157|BRP44|25874|brain protein 44##BC104158|BRP44|25874|brain protein 44	0.826514	CTCF.p2:3:0.827
chr11	111472811	111472928	reg1001194.p2	16.150	+	TSC_hg19_v1_chr11_-_111412453 AK096925	-60421	-	AY358554 TSC_hg19_v1_chr11_+_111411485 AK055654 AK296231 BC025407 AK298165	-61414	+	AK055539 NM_178834	-61637	+	TSC_hg19_v1_chr11_+_111473176 NM_015191 AK291233 AL136764 AB018324 AB096248 AK000396 BC113459 BC117183 AB084424	364	+	M65254 TSC_hg19_v1_chr11_-_111637059	164161	-	AB384965 DQ890606 DQ894107 EU176538 AK292275 AK293388 AK294716 TSC_hg19_v1_chr11_-_111637114 BC027596 AK296455 AK301705 AF087438 AF163473 NM_001177562 NM_001177563 NM_002716 NM_181699 NM_181700	164257	-	AY358554|LAYN|143903|layilin##AK055654|LAYN|143903|layilin##AK296231|LAYN|143903|layilin##BC025407|LAYN|143903|layilin##AK298165|LAYN|143903|layilin##AK055539|LAYN|143903|layilin##NM_178834|LAYN|143903|layilin##NM_015191|SIK2|23235|salt-inducible kinase 2##AK291233|SIK2|23235|salt-inducible kinase 2##AL136764|SIK2|23235|salt-inducible kinase 2##AB018324|SIK2|23235|salt-inducible kinase 2##AB096248|SIK2|23235|salt-inducible kinase 2##AK000396|SIK2|23235|salt-inducible kinase 2##BC113459|SIK2|23235|salt-inducible kinase 2##BC117183|SIK2|23235|salt-inducible kinase 2##AB084424|SIK2|23235|salt-inducible kinase 2##M65254|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##DQ890606|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##DQ894107|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##EU176538|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK292275|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK293388|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK294716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##BC027596|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK296455|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK301705|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF087438|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF163473|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177562|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177563|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_002716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181699|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181700|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta	0.0	
chr11	115195437	115195559	reg1001808.p1	16.150	+	AY309502 TSC_hg19_v1_chr11_-_115088658	-106850	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-646250	+	AK000134 AK225236 TSC_hg19_v1_chr11_-_114466485 NM_001077639 NM_017678	-729020	-	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	179682	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	1448200	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	1463217	-	AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##AK000134|FAM55D|54827|family with sequence similarity 55, member D##AK225236|FAM55D|54827|family with sequence similarity 55, member D##NM_001077639|FAM55D|54827|family with sequence similarity 55, member D##NM_017678|FAM55D|54827|family with sequence similarity 55, member D##AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259	0.938712	CTCF.p2:-8:0.939
chr13	96056644	96056770	reg1001174.p1	16.150	+	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	-102995	-	X65666 X71136 AB464716 NM_007084	-692389	-	TSC_hg19_v1_chr13_+_95254110 NM_180989 BC033906 BC052243 AK126794	-802605	+	NM_001160100 NM_182848 AK055855	29147	+	TSC_hg19_v1_chr13_+_96204946 NM_006984 BC010920 U89916 AK315737 DQ892831 DQ896077 CR456845	148267	+	AB385415 AF272347 AF272348 TSC_hg19_v1_chr13_-_96294398	237636	-	AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##NM_180989|GPR180|160897|G protein-coupled receptor 180##BC033906|GPR180|160897|G protein-coupled receptor 180##BC052243|GPR180|160897|G protein-coupled receptor 180##AK126794|GPR180|160897|G protein-coupled receptor 180##NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10##NM_006984|CLDN10|9071|claudin 10##BC010920|CLDN10|9071|claudin 10##U89916|CLDN10|9071|claudin 10##AK315737|CLDN10|9071|claudin 10##DQ892831|CLDN10|9071|claudin 10##DQ896077|CLDN10|9071|claudin 10##CR456845|CLDN10|9071|claudin 10##AF272347|DZIP1|22873|DAZ interacting protein 1##AF272348|DZIP1|22873|DAZ interacting protein 1	0.255457	CTCF.p2:19:0.255
chr6	160559373	160559501	reg1001788.p1	16.149	+	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	-16523	+	TSC_hg19_v1_chr6_+_160390137 NM_000876 Y00285 J03528	-169304	+	BC069142 BC069581 BC110454 NM_002377 CU686912 CR542261	-231458	+	CU689064 BC039899 AK290787 X98333 AB075951 BC030978 NM_003058	120438	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	209957	+	NM_005577	527969	-	NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_000876|IGF2R|3482|insulin-like growth factor 2 receptor##Y00285|IGF2R|3482|insulin-like growth factor 2 receptor##J03528|IGF2R|3482|insulin-like growth factor 2 receptor##BC069142|MAS1|4142|MAS1 oncogene##BC069581|MAS1|4142|MAS1 oncogene##BC110454|MAS1|4142|MAS1 oncogene##NM_002377|MAS1|4142|MAS1 oncogene##CR542261|MAS1|4142|MAS1 oncogene##BC039899|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AK290787|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##X98333|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AB075951|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC030978|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003058|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_005577|LPA|4018|lipoprotein, Lp(a)	0.204971	
chr19	18362717	18362846	reg1001243.p1	16.145	+	NM_000923 U66346	-3772	-	AK300888 AK300983 TSC_hg19_v1_chr19_-_18337249 NM_001098818 U88713	-25522	-	NM_001098819 U88712	-27479	-	AK057466 AK302431 AL136867 BC112932 NM_001145304 NM_001145305 NM_025249	22461	-	TSC_hg19_v1_chr19_+_18391286 AB593186	28500	+	BC169275 TSC_hg19_v1_chr19_-_18391478	28678	-	NM_000923|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U66346|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK300888|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK300983|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##NM_001098818|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U88713|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##NM_001098819|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U88712|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK057466|KIAA1683|80726|KIAA1683##AK302431|KIAA1683|80726|KIAA1683##AL136867|KIAA1683|80726|KIAA1683##BC112932|KIAA1683|80726|KIAA1683##NM_001145304|KIAA1683|80726|KIAA1683##NM_001145305|KIAA1683|80726|KIAA1683##NM_025249|KIAA1683|80726|KIAA1683	0.998641	CTCF.p2:17:0.999
chr22	39399220	39399355	reg1001842.p1	16.145	+	AK024854 NM_004900 U61084 CT841510 AB527109 AB528064 AB528855 CU012951 CU012954 CU013239 CU013242 CU691044 AY743217 EU527884	-20856	+	NM_001193289 NM_145699 U03891 BC126416 BC144146 CR456393 AB528063 CU012950 CU013238 HQ258100	-45677	+	TSC_hg19_v1_chr22_-_39268255 AK094829 NM_014292	-130983	-	TSC_hg19_v1_chr22_+_39410261 AK313272 AF165520 BC011739 NM_014508 BC021080	10964	+	CR456394 TSC_hg19_v1_chr22_+_39410295 AB208979 AB590057 CU012952 CU013240	11039	+	NM_152426 TSC_hg19_v1_chr22_+_39417130	17840	+	AK024854|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##NM_004900|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##U61084|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CT841510|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012951|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012954|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##CU013239|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU013242|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AY743217|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##EU527884|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##NM_001193289|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##NM_145699|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##U03891|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC126416|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC144146|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CR456393|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU012950|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU013238|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##HQ258100|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##AK094829|CBX6|23466|chromobox homolog 6##NM_014292|CBX6|23466|chromobox homolog 6##AK313272|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AF165520|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC011739|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##NM_014508|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC021080|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##NM_152426|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D	0.937044	CTCF.p2:-6:0.937
chr9	140131032	140131168	reg1001223.p1	16.144	+	AK095999 NM_080877	-5716	+	BC029942 NM_001177316 NM_001177317	-5892	+	NM_001190228	-9083	+	TSC_hg19_v1_chr9_+_140135712 NM_006088	4608	+	AK000560 AK021414 AK026594 AK026609 AK298087 BC029529 TSC_hg19_v1_chr9_+_140135738 AK026167 BX648521	4638	+	TSC_hg19_v1_chr9_+_140135744 AK098686 BC019829 BC004188 BC012835 AF064849 BC002783 BC039175 BC002885 BC019359 BC007889 BC024038 BC071889 BC001911 AB590760 CU691670 AY167990	4677	+	AK095999|SLC34A3|142680|solute carrier family 34 (sodium phosphate), member 3##NM_080877|SLC34A3|142680|solute carrier family 34 (sodium phosphate), member 3##BC029942|SLC34A3|142680|solute carrier family 34 (sodium phosphate), member 3##NM_001177316|SLC34A3|142680|solute carrier family 34 (sodium phosphate), member 3##NM_001177317|SLC34A3|142680|solute carrier family 34 (sodium phosphate), member 3##NM_001190228|RNF224|643596|ring finger protein 224##NM_006088|TUBB4B|10383|tubulin, beta 4B class IVb##AK000560|TUBB4B|10383|tubulin, beta 4B class IVb##AK021414|TUBB4B|10383|tubulin, beta 4B class IVb##AK026594|TUBB4B|10383|tubulin, beta 4B class IVb##AK026609|TUBB4B|10383|tubulin, beta 4B class IVb##AK298087|TUBB4B|10383|tubulin, beta 4B class IVb##BC029529|TUBB4B|10383|tubulin, beta 4B class IVb##AK026167|TUBB4B|10383|tubulin, beta 4B class IVb##BX648521|TUBB4B|10383|tubulin, beta 4B class IVb##AK098686|TUBB4B|10383|tubulin, beta 4B class IVb##BC019829|TUBB4B|10383|tubulin, beta 4B class IVb##BC004188|TUBB4B|10383|tubulin, beta 4B class IVb##BC012835|TUBB4B|10383|tubulin, beta 4B class IVb##BC002783|TUBB4B|10383|tubulin, beta 4B class IVb##BC039175|TUBB4B|10383|tubulin, beta 4B class IVb##BC002885|TUBB4B|10383|tubulin, beta 4B class IVb##BC019359|TUBB4B|10383|tubulin, beta 4B class IVb##BC007889|TUBB4B|10383|tubulin, beta 4B class IVb##BC024038|TUBB4B|10383|tubulin, beta 4B class IVb##BC071889|TUBB4B|10383|tubulin, beta 4B class IVb##BC001911|TUBB4B|10383|tubulin, beta 4B class IVb##AY167990|TUBB4B|10383|tubulin, beta 4B class IVb	0.992431	CTCF.p2:-22:0.992
chr9	96975889	96976011	reg1001057.p1	16.143	+	TSC_hg19_v1_chr9_+_96846806 AK124912	-129136	+	NM_001253829 NM_152422 TSC_hg19_v1_chr9_+_96846745 BC031279 AK310403 AK289692	-129199	+	TSC_hg19_v1_chr9_+_96793094 AY171233 NM_177995 BC067120 NM_001253830 BC051654	-182835	+	TSC_hg19_v1_chr9_+_97021599 NM_194320 AK289742 AK093956	45640	+	HQ258506 BC130390 BC143798 NM_017561	114964	-	TSC_hg19_v1_chr9_+_97136850 NM_032558	160883	+	AK124912|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253829|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_152422|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC031279|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK310403|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK289692|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AY171233|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_177995|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC067120|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253830|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC051654|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_194320|ZNF169|169841|zinc finger protein 169##AK289742|ZNF169|169841|zinc finger protein 169##AK093956|ZNF169|169841|zinc finger protein 169##HQ258506|FAM22F|54754|family with sequence similarity 22, member F##BC130390|FAM22F|54754|family with sequence similarity 22, member F##BC143798|FAM22F|54754|family with sequence similarity 22, member F##NM_017561|FAM22F|54754|family with sequence similarity 22, member F##NM_032558|HIATL1|84641|hippocampus abundant transcript-like 1	0.999796	CTCF.p2:19:1.000
chr1	201223815	201223912	reg1000632.p2	16.142	+	BC033185 NM_001164586	-63911	+	AK075335 AY138587 AK296307 TSC_hg19_v1_chr1_-_201123603 BC001106 AL136600 AK054883 AK303843 NM_016456	-100251	-	TSC_hg19_v1_chr1_-_201123569 AK091726	-100292	-	NM_000299 NM_001005337 Z34974 AK315291 X79293 BC114571 BC115702	28774	+	TSC_hg19_v1_chr1_-_201342319 X79855 X79856 X79858 CU678094 S64668 X74819 X79859	118517	-	TSC_hg19_v1_chr1_-_201346783 L40162 AY277394 X79861 BC002653	122925	-	BC033185|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##NM_001164586|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##AK075335|TMEM9|252839|transmembrane protein 9##AY138587|TMEM9|252839|transmembrane protein 9##AK296307|TMEM9|252839|transmembrane protein 9##BC001106|TMEM9|252839|transmembrane protein 9##AL136600|TMEM9|252839|transmembrane protein 9##AK054883|TMEM9|252839|transmembrane protein 9##AK303843|TMEM9|252839|transmembrane protein 9##NM_016456|TMEM9|252839|transmembrane protein 9##AK091726|TMEM9|252839|transmembrane protein 9##NM_000299|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##NM_001005337|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##Z34974|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##AK315291|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##X79293|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC114571|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC115702|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##X79855|TNNT2|7139|troponin T type 2 (cardiac)##X79856|TNNT2|7139|troponin T type 2 (cardiac)##X79858|TNNT2|7139|troponin T type 2 (cardiac)##S64668|TNNT2|7139|troponin T type 2 (cardiac)##X74819|TNNT2|7139|troponin T type 2 (cardiac)##X79859|TNNT2|7139|troponin T type 2 (cardiac)##L40162|TNNT2|7139|troponin T type 2 (cardiac)##AY277394|TNNT2|7139|troponin T type 2 (cardiac)##X79861|TNNT2|7139|troponin T type 2 (cardiac)##BC002653|TNNT2|7139|troponin T type 2 (cardiac)	0.999939	CTCF.p2:-1:1.000
chr6	108863352	108863475	reg1000941.p1	16.142	+	TSC_hg19_v1_chr6_+_108616194 AF520418 BC018445 NM_145315	-247274	+	TSC_hg19_v1_chr6_-_108582316 NM_003795 NM_152827	-281028	-	TSC_hg19_v1_chr6_-_108582245 BC015179 BC014580 AK289476	-281175	-	TSC_hg19_v1_chr6_+_108881027 NM_201559 BC020227 BC021224	17610	+	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	18662	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	18844	+	AF520418|LACE1|246269|lactation elevated 1##BC018445|LACE1|246269|lactation elevated 1##NM_145315|LACE1|246269|lactation elevated 1##NM_003795|SNX3|8724|sorting nexin 3##NM_152827|SNX3|8724|sorting nexin 3##BC015179|SNX3|8724|sorting nexin 3##BC014580|SNX3|8724|sorting nexin 3##AK289476|SNX3|8724|sorting nexin 3##NM_201559|FOXO3|2309|forkhead box O3##BC020227|FOXO3|2309|forkhead box O3##BC021224|FOXO3|2309|forkhead box O3##BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3	0.998385	CTCF.p2:-29:0.998
chr2	107159301	107159430	reg1001331.p1	16.139	+	NM_001144013	-74565	-	TSC_hg19_v1_chr2_-_106810781 NM_025076	-348560	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	-348607	-	FJ433885 TSC_hg19_v1_chr2_-_107502508	343120	-	AB058780 NM_001142351 TSC_hg19_v1_chr2_-_107502624	343254	-	TSC_hg19_v1_chr2_-_107503063 FJ433884	343697	-	NM_001144013|RGPD3|653489|RANBP2-like and GRIP domain containing 3##NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	0.048743	
chr2	20643115	20643251	reg1000901.p1	16.139	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-92764	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-116050	-	AF272350 TSC_hg19_v1_chr2_-_20512079	-131134	-	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	3649	+	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	207665	-	AF522369 NM_182828	223240	+	AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)##AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7	0.996565	CTCF.p2:-22:0.997
chr2	113357723	113357859	reg1002021.p1	16.138	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-15602	+	TSC_hg19_v1_chr2_+_113342023 AK024631 BC004498 NM_032309 AK312219	-15753	+	BX647360 BC110833 BC150139 AK294027 TSC_hg19_v1_chr2_+_113300041 AK001678 AK301178 AK022533 BX647683	-57872	+	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	45729	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	164431	-	NM_000575 BC035169	185181	-	AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BC004498|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_032309|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK312219|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BX647360|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BC110833|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BC150139|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK294027|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK001678|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK301178|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK022533|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BX647683|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha	0.986693	CTCF.p2:-5:0.987
chr2	241083316	241083434	reg1001122.p1	16.138	+	NM_148961	-3303	-	TSC_hg19_v1_chr2_-_241075721 AF487338 BC033955 NM_001163424 AF453951 NM_138336 AB463905	-7642	-	NM_173351	-97887	-	TSC_hg19_v1_chr2_+_241375079 BC051279 NM_002081 X54232	291705	+	TSC_hg19_v1_chr2_+_241375207 BC027997	291836	+	TSC_hg19_v1_chr2_+_241375269 AK223516 BC045712	291890	+	NM_148961|OTOS|150677|otospiralin##AF487338|MYEOV2|150678|myeloma overexpressed 2##BC033955|MYEOV2|150678|myeloma overexpressed 2##NM_001163424|MYEOV2|150678|myeloma overexpressed 2##AF453951|MYEOV2|150678|myeloma overexpressed 2##NM_138336|MYEOV2|150678|myeloma overexpressed 2##NM_173351|OR6B3|150681|olfactory receptor, family 6, subfamily B, member 3##BC051279|GPC1|2817|glypican 1##NM_002081|GPC1|2817|glypican 1##X54232|GPC1|2817|glypican 1##BC027997|GPC1|2817|glypican 1##AK223516|GPC1|2817|glypican 1##BC045712|GPC1|2817|glypican 1	0.998954	CTCF.p2:8:0.999
chr19	47799521	47799630	reg1001140.p2	16.137	+	TSC_hg19_v1_chr19_+_47778141 BC022076 BC045749 NM_178511 BC064510	-21439	+	TSC_hg19_v1_chr19_+_47759811 BC002787 BC009743	-39757	+	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	-39814	+	BC008982 NM_001736 TSC_hg19_v1_chr19_+_47813117 M62505	13527	+	AB038237 NM_018485	40795	+	NM_014681 TSC_hg19_v1_chr19_+_47852571 AK304710	52994	+	BC022076|PRR24|255783|proline rich 24##BC045749|PRR24|255783|proline rich 24##NM_178511|PRR24|255783|proline rich 24##BC064510|PRR24|255783|proline rich 24##BC002787|CCDC9|26093|coiled-coil domain containing 9##BC009743|CCDC9|26093|coiled-coil domain containing 9##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9##BC008982|C5AR1|728|complement component 5a receptor 1##NM_001736|C5AR1|728|complement component 5a receptor 1##M62505|C5AR1|728|complement component 5a receptor 1##AB038237|GPR77|27202|G protein-coupled receptor 77##NM_018485|GPR77|27202|G protein-coupled receptor 77##NM_014681|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34##AK304710|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34	0.998668	CTCF.p2:-8:0.999
chr14	96150267	96150407	reg1001787.p1	16.135	+	TSC_hg19_v1_chr14_+_96001402 DQ083331	-148904	+	AB223038 TSC_hg19_v1_chr14_+_96001383	-148954	+	TSC_hg19_v1_chr14_+_96001362 BX248075 BC023528 BC047680	-148969	+	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	2441	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	30130	-	AK023027 TSC_hg19_v1_chr14_+_96342762	192408	+	DQ083331|GLRX5|51218|glutaredoxin 5##AB223038|GLRX5|51218|glutaredoxin 5##BX248075|GLRX5|51218|glutaredoxin 5##BC023528|GLRX5|51218|glutaredoxin 5##BC047680|GLRX5|51218|glutaredoxin 5##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##AK023027|LOC100507043|100507043|uncharacterized LOC100507043	0.971504	CTCF.p2:13:0.972
chr15	37175989	37176115	reg1001778.p1	16.134	+	NM_032499	-243247	+	TSC_hg19_v1_chr15_+_36871914 NM_001130010 AK026504 BC006254	-304153	+	CU688170 TSC_hg19_v1_chr15_-_35838365 BC066652 AK094007 AL833427 AX748407 AK125017 NM_001141972 NM_080650	-1337666	-	CU674744 EU831754 EU831831 TSC_hg19_v1_chr15_-_37390403 AK294411 AK311546 AK056038 NM_172315	214414	-	AK056620 NM_172316 AB463111 CU690674 EU446635 EU831824 AK055936	215587	-	TSC_hg19_v1_chr15_-_37391935 AF178948 AF179896 AF179897 AF179898 AF179899	215867	-	NM_032499|C15orf41|84529|chromosome 15 open reading frame 41##NM_001130010|C15orf41|84529|chromosome 15 open reading frame 41##AK026504|C15orf41|84529|chromosome 15 open reading frame 41##BC006254|C15orf41|84529|chromosome 15 open reading frame 41##BC066652|ATPBD4|89978|ATP binding domain 4##AK094007|ATPBD4|89978|ATP binding domain 4##AL833427|ATPBD4|89978|ATP binding domain 4##AK125017|ATPBD4|89978|ATP binding domain 4##NM_001141972|ATPBD4|89978|ATP binding domain 4##NM_080650|ATPBD4|89978|ATP binding domain 4##EU831754|MEIS2|4212|Meis homeobox 2##EU831831|MEIS2|4212|Meis homeobox 2##AK294411|MEIS2|4212|Meis homeobox 2##AK311546|MEIS2|4212|Meis homeobox 2##AK056038|MEIS2|4212|Meis homeobox 2##NM_172315|MEIS2|4212|Meis homeobox 2##AK056620|MEIS2|4212|Meis homeobox 2##NM_172316|MEIS2|4212|Meis homeobox 2##EU446635|MEIS2|4212|Meis homeobox 2##EU831824|MEIS2|4212|Meis homeobox 2##AK055936|MEIS2|4212|Meis homeobox 2##AF178948|MEIS2|4212|Meis homeobox 2##AF179896|MEIS2|4212|Meis homeobox 2##AF179897|MEIS2|4212|Meis homeobox 2##AF179898|MEIS2|4212|Meis homeobox 2##AF179899|MEIS2|4212|Meis homeobox 2	0.999804	CTCF.p2:-21:1.000
chr10	93011310	93011451	reg1001302.p1	16.133	+	TSC_hg19_v1_chr10_+_92980539 AL832496	-30846	+	TSC_hg19_v1_chr10_+_92980445 NM_032373	-30972	+	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	-88618	+	BC071762 TSC_hg19_v1_chr10_+_93170064	158678	+	TSC_hg19_v1_chr10_+_93170100 NM_173497 NM_182765 AK295723 AK094625 BC040187 EU832472 EU832551 BX537856	158801	+	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	381381	-	AL832496|PCGF5|84333|polycomb group ring finger 5##NM_032373|PCGF5|84333|polycomb group ring finger 5##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5##NM_173497|HECTD2|143279|HECT domain containing 2##NM_182765|HECTD2|143279|HECT domain containing 2##AK295723|HECTD2|143279|HECT domain containing 2##AK094625|HECTD2|143279|HECT domain containing 2##BC040187|HECTD2|143279|HECT domain containing 2##EU832472|HECTD2|143279|HECT domain containing 2##EU832551|HECTD2|143279|HECT domain containing 2##BX537856|HECTD2|143279|HECT domain containing 2##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C	0.996158	CTCF.p2:22:0.996
chr18	12727193	12727323	reg1001620.p1	16.132	+	TSC_hg19_v1_chr18_+_12703040 NM_020232 AK225882 AF168712 AK057005 BC013356 CU680576	-24222	+	TSC_hg19_v1_chr18_-_12702776 AK298223	-24494	-	TSC_hg19_v1_chr18_-_12702689 AK022604 BC033026 AL833727 BC026307 NM_024899 AK303117	-24583	-	CU678897 AB590517 BC008244 TSC_hg19_v1_chr18_-_12884237 M25393 AK225706 AK290649 AK292570 BC016727 NM_001207013 NM_002828 NM_080422 NM_080423	156978	-	TSC_hg19_v1_chr18_+_12947986 NM_001013437 NM_031216	220727	+	TSC_hg19_v1_chr18_+_12948009 AK314403	220748	+	NM_020232|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK225882|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AF168712|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK057005|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##BC013356|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK298223|CEP76|79959|centrosomal protein 76kDa##AK022604|CEP76|79959|centrosomal protein 76kDa##BC033026|CEP76|79959|centrosomal protein 76kDa##AL833727|CEP76|79959|centrosomal protein 76kDa##BC026307|CEP76|79959|centrosomal protein 76kDa##NM_024899|CEP76|79959|centrosomal protein 76kDa##AK303117|CEP76|79959|centrosomal protein 76kDa##BC008244|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##M25393|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK225706|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK290649|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK292570|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##BC016727|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_001207013|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_002828|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_080422|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_080423|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_001013437|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_031216|SEH1L|81929|SEH1-like (S. cerevisiae)##AK314403|SEH1L|81929|SEH1-like (S. cerevisiae)	0.814809	CTCF.p2:-9:0.815
chr20	44935831	44935930	reg1001006.p1	16.132	+	BC136526 NM_021248	-55552	-	TSC_hg19_v1_chr20_+_44746952 AK222896 AJ300189 AB209660 AB590222 AX781593 AY225405 BT019901 DQ891804 DQ894988	-188915	+	TSC_hg19_v1_chr20_+_44746923 NM_001250 NM_152854 BC064518 BC012419 X60592	-188964	+	TSC_hg19_v1_chr20_-_44937138 AK289584	1290	-	TSC_hg19_v1_chr20_-_44993030 AK300798 AF132949 AK222928 AK301022 BC021138 BC014191 AF455052 AK300207 AK315726 NM_015945 NM_173073 NM_173179	57155	-	AB058737 TSC_hg19_v1_chr20_-_45035232	99336	-	BC136526|CDH22|64405|cadherin 22, type 2##NM_021248|CDH22|64405|cadherin 22, type 2##AK222896|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AJ300189|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AB209660|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AY225405|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BT019901|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ891804|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ894988|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_001250|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_152854|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC064518|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC012419|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AK289584|CDH22|64405|cadherin 22, type 2##AK300798|SLC35C2|51006|solute carrier family 35, member C2##AF132949|SLC35C2|51006|solute carrier family 35, member C2##AK222928|SLC35C2|51006|solute carrier family 35, member C2##AK301022|SLC35C2|51006|solute carrier family 35, member C2##BC021138|SLC35C2|51006|solute carrier family 35, member C2##BC014191|SLC35C2|51006|solute carrier family 35, member C2##AF455052|SLC35C2|51006|solute carrier family 35, member C2##AK300207|SLC35C2|51006|solute carrier family 35, member C2##AK315726|SLC35C2|51006|solute carrier family 35, member C2##NM_015945|SLC35C2|51006|solute carrier family 35, member C2##NM_173073|SLC35C2|51006|solute carrier family 35, member C2##NM_173179|SLC35C2|51006|solute carrier family 35, member C2##AB058737|ELMO2|63916|engulfment and cell motility 2	0.972956	CTCF.p2:-11:0.973
chr9	21814011	21814130	reg1000993.p3	16.132	+	TSC_hg19_v1_chr9_+_21802691 CU693136 CR541670 CR541710	-11353	+	BC026106 TSC_hg19_v1_chr9_+_21802660 BC012316 BC018625	-11406	+	TSC_hg19_v1_chr9_+_21802647 AF109294 AY712791 NM_002451 U22233 L40432 AK300592 AK309365	-11430	+	AF115544 NM_058197 TSC_hg19_v1_chr9_-_21974857 DQ318021 L27211	160793	-	NM_000077 NM_001195132	161061	-	BT007020 TSC_hg19_v1_chr9_-_21994352 U26727	180279	-	CR541670|MTAP|4507|methylthioadenosine phosphorylase##CR541710|MTAP|4507|methylthioadenosine phosphorylase##BC026106|MTAP|4507|methylthioadenosine phosphorylase##BC012316|MTAP|4507|methylthioadenosine phosphorylase##BC018625|MTAP|4507|methylthioadenosine phosphorylase##AF109294|MTAP|4507|methylthioadenosine phosphorylase##AY712791|MTAP|4507|methylthioadenosine phosphorylase##NM_002451|MTAP|4507|methylthioadenosine phosphorylase##U22233|MTAP|4507|methylthioadenosine phosphorylase##L40432|MTAP|4507|methylthioadenosine phosphorylase##AK300592|MTAP|4507|methylthioadenosine phosphorylase##AK309365|MTAP|4507|methylthioadenosine phosphorylase##AF115544|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_058197|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##DQ318021|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##L27211|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_000077|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_001195132|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##BT007020|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##U26727|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	0.996634	CTCF.p2:-25:0.997
chr22	22067592	22067714	reg1001035.p1	16.130	+	NM_014337 NM_148175 NM_148176 TSC_hg19_v1_chr22_+_22020298 AF320072 AK289545 BC000022 U37219 AK127259 BC028385 AK299206 CR456548 DQ891659 DQ894846 AB463162 CU013148 CU013436 CU673996 CU688484	-47324	+	TSC_hg19_v1_chr22_+_21996619 CR456570 AF277316 AB528230 BC139837 CU013169 CU013457	-71014	+	TSC_hg19_v1_chr22_+_21996608 BC006248 AB043007	-71052	+	BC034486 BC074501 TSC_hg19_v1_chr22_-_22090057 BC048303 NM_013313 AB098734 AB098735	22395	-	TSC_hg19_v1_chr22_-_22221936 DQ399292 AB384931 EU176323 EU831429 EU831522 AK307615 Z11694 AK090869 BC099905	154176	-	AK295188 TSC_hg19_v1_chr22_-_22221938	154284	-	NM_014337|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148175|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148176|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AF320072|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK289545|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC000022|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##U37219|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK127259|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC028385|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK299206|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456548|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ891659|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ894846|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013148|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013436|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456570|SDF2L1|23753|stromal cell-derived factor 2-like 1##AF277316|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC139837|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013169|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013457|SDF2L1|23753|stromal cell-derived factor 2-like 1##AB043007|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC034486|YPEL1|29799|yippee-like 1 (Drosophila)##BC074501|YPEL1|29799|yippee-like 1 (Drosophila)##BC048303|YPEL1|29799|yippee-like 1 (Drosophila)##NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)##AB098734|YPEL1|29799|yippee-like 1 (Drosophila)##AB098735|YPEL1|29799|yippee-like 1 (Drosophila)##DQ399292|MAPK1|5594|mitogen-activated protein kinase 1##EU176323|MAPK1|5594|mitogen-activated protein kinase 1##EU831429|MAPK1|5594|mitogen-activated protein kinase 1##EU831522|MAPK1|5594|mitogen-activated protein kinase 1##AK307615|MAPK1|5594|mitogen-activated protein kinase 1##Z11694|MAPK1|5594|mitogen-activated protein kinase 1##AK090869|MAPK1|5594|mitogen-activated protein kinase 1##BC099905|MAPK1|5594|mitogen-activated protein kinase 1##AK295188|MAPK1|5594|mitogen-activated protein kinase 1	0.956785	CTCF.p2:-16:0.946
chr19	6048960	6049067	reg1000877.p3	16.128	+	AK299856 TSC_hg19_v1_chr19_-_5978306 NM_003624 NM_007320 NM_007322	-70729	-	AK025300 AK299260 AK314343 TSC_hg19_v1_chr19_-_5978152	-70862	-	CU678680 DQ234346 AK308205 TSC_hg19_v1_chr19_-_5978122 BC004349 AL050149 AK222813 AK301942 Y08698 AK222990	-70901	-	TSC_hg19_v1_chr19_-_6110512 AK291196 BC071571 X76091	61510	-	TSC_hg19_v1_chr19_-_6110613 BC028579 AK303321 NM_000635 NM_134433	61599	-	AY009107 BC022027 AK093433 AX748123 AK302604 AJ577571 NM_030924 BC090046 AL136854	86740	+	AK299856|RANBP3|8498|RAN binding protein 3##NM_003624|RANBP3|8498|RAN binding protein 3##NM_007320|RANBP3|8498|RAN binding protein 3##NM_007322|RANBP3|8498|RAN binding protein 3##AK025300|RANBP3|8498|RAN binding protein 3##AK299260|RANBP3|8498|RAN binding protein 3##AK314343|RANBP3|8498|RAN binding protein 3##DQ234346|RANBP3|8498|RAN binding protein 3##AK308205|RANBP3|8498|RAN binding protein 3##BC004349|RANBP3|8498|RAN binding protein 3##AL050149|RANBP3|8498|RAN binding protein 3##AK222813|RANBP3|8498|RAN binding protein 3##AK301942|RANBP3|8498|RAN binding protein 3##Y08698|RANBP3|8498|RAN binding protein 3##AK222990|RANBP3|8498|RAN binding protein 3##AK291196|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC071571|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##X76091|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC028579|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK303321|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_000635|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_134433|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AY009107|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC022027|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK093433|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK302604|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AJ577571|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##NM_030924|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC090046|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AL136854|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2	0.908306	CTCF.p2:-19:0.908
chr17	12645693	12645810	reg1001314.p2	16.125	+	AK097821 NM_001146313	-22146	+	TSC_hg19_v1_chr17_+_12569389 BC126307 BC143391 AF532596	-76317	+	AK128608 TSC_hg19_v1_chr17_+_12569334 AK292885	-76430	+	TSC_hg19_v1_chr17_+_12692837 NM_014859 AB014572	47066	+	TSC_hg19_v1_chr17_-_12921295 AK300011 AF304370 CR457261 CU674942	275525	-	TSC_hg19_v1_chr17_-_12921325 AK298397 AK094687 BC001939 BC004158	275568	-	AK097821|MYOCD|93649|myocardin##NM_001146313|MYOCD|93649|myocardin##BC126307|MYOCD|93649|myocardin##BC143391|MYOCD|93649|myocardin##AF532596|MYOCD|93649|myocardin##AK128608|MYOCD|93649|myocardin##AK292885|MYOCD|93649|myocardin##NM_014859|ARHGAP44|9912|Rho GTPase activating protein 44##AB014572|ARHGAP44|9912|Rho GTPase activating protein 44##AK300011|ELAC2|60528|elaC homolog 2 (E. coli)##AF304370|ELAC2|60528|elaC homolog 2 (E. coli)##CR457261|ELAC2|60528|elaC homolog 2 (E. coli)##AK298397|ELAC2|60528|elaC homolog 2 (E. coli)##AK094687|ELAC2|60528|elaC homolog 2 (E. coli)##BC001939|ELAC2|60528|elaC homolog 2 (E. coli)##BC004158|ELAC2|60528|elaC homolog 2 (E. coli)	0.758905	CTCF.p2:19:0.759
chr5	118747857	118747987	reg1001173.p2	16.124	+	TSC_hg19_v1_chr5_+_118691713 AF099935 AK001850 AF099936 CU675493	-56184	+	BC007014 NM_014350 BC005352 TSC_hg19_v1_chr5_+_118691687	-56304	+	AF070671 TSC_hg19_v1_chr5_+_118604523	-143405	+	TSC_hg19_v1_chr5_+_118788215 NM_000414 NM_001199292 AK301212 AK312449 NM_001199291 BC003098 AK293254 AB208932 X87176 AK299685 AK298075 CU678374 DQ891866 DQ895055	40274	+	AF427126 AY692447 NM_001163991 NM_182761 BC040622 BC128242 BC128243	217394	+	BC011941 TSC_hg19_v1_chr5_-_119740564	992628	-	AF099935|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001850|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099936|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC007014|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_014350|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC005352|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF070671|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_000414|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199292|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK301212|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK312449|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199291|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC003098|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK293254|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##X87176|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK299685|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK298075|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ891866|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ895055|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AF427126|FAM170A|340069|family with sequence similarity 170, member A##AY692447|FAM170A|340069|family with sequence similarity 170, member A##NM_001163991|FAM170A|340069|family with sequence similarity 170, member A##NM_182761|FAM170A|340069|family with sequence similarity 170, member A##BC040622|FAM170A|340069|family with sequence similarity 170, member A##BC128242|FAM170A|340069|family with sequence similarity 170, member A##BC128243|FAM170A|340069|family with sequence similarity 170, member A	0.815733	CTCF.p2:6:0.816
chr14	55912996	55913124	reg1001339.p1	16.123	+	AY457923 HQ258397 NM_199047 DQ448593 BC117185 BC117159	-5763	-	BC028015 AB587548 AK292810 TSC_hg19_v1_chr14_-_55878549 BC109089 BC109090 AK131251 NM_014924	-34504	-	NM_152231	-174189	+	BX248296 TSC_hg19_v1_chr14_-_56046835 AK124927	133756	-	TSC_hg19_v1_chr14_+_56046963 NM_001079521 NM_001079522 NM_004986 NM_182926 BC066337 D13629 AK302797 BC050555 BC058736 Z22551 AY264265 BC112337	134042	+	L25616 TSC_hg19_v1_chr14_+_56078737 AB527439	165689	+	AY457923|TBPL2|387332|TATA box binding protein like 2##HQ258397|TBPL2|387332|TATA box binding protein like 2##NM_199047|TBPL2|387332|TATA box binding protein like 2##DQ448593|TBPL2|387332|TATA box binding protein like 2##BC117185|TBPL2|387332|TATA box binding protein like 2##BC117159|TBPL2|387332|TATA box binding protein like 2##BC028015|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##AK292810|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##BC109089|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##BC109090|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##AK131251|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##NM_014924|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##NM_152231|FBXO34|55030|F-box protein 34##BX248296|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##AK124927|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##NM_001079521|KTN1|3895|kinectin 1 (kinesin receptor)##NM_001079522|KTN1|3895|kinectin 1 (kinesin receptor)##NM_004986|KTN1|3895|kinectin 1 (kinesin receptor)##NM_182926|KTN1|3895|kinectin 1 (kinesin receptor)##BC066337|KTN1|3895|kinectin 1 (kinesin receptor)##D13629|KTN1|3895|kinectin 1 (kinesin receptor)##AK302797|KTN1|3895|kinectin 1 (kinesin receptor)##BC050555|KTN1|3895|kinectin 1 (kinesin receptor)##BC058736|KTN1|3895|kinectin 1 (kinesin receptor)##Z22551|KTN1|3895|kinectin 1 (kinesin receptor)##AY264265|KTN1|3895|kinectin 1 (kinesin receptor)##BC112337|KTN1|3895|kinectin 1 (kinesin receptor)##L25616|KTN1|3895|kinectin 1 (kinesin receptor)	0.951122	CTCF.p2:-2:0.951
chr1	156100212	156100345	reg1001582.p1	16.122	+	TSC_hg19_v1_chr1_+_156084585 AY528714 AB527090 EU831758 EU831836 EU832167 EU832261 CU677029 CU678414 AY847595 AY847596 AY847597	-15634	+	TSC_hg19_v1_chr1_+_156084568 M13451	-15708	+	TSC_hg19_v1_chr1_+_156084553 BC003162 AK130179	-15727	+	NM_001193301 AY358531	19493	+	NM_001193300 NM_022367 AK296693 TSC_hg19_v1_chr1_+_156123375 AK091127 AK290353 AX746794 NM_001193302 AK315547 BX640891 BC020974	23076	+	TSC_hg19_v1_chr1_+_156163725 NM_014655	63460	+	AY528714|LMNA|4000|lamin A/C##EU831758|LMNA|4000|lamin A/C##EU831836|LMNA|4000|lamin A/C##EU832167|LMNA|4000|lamin A/C##EU832261|LMNA|4000|lamin A/C##AY847595|LMNA|4000|lamin A/C##AY847596|LMNA|4000|lamin A/C##AY847597|LMNA|4000|lamin A/C##M13451|LMNA|4000|lamin A/C##BC003162|LMNA|4000|lamin A/C##AK130179|LMNA|4000|lamin A/C##NM_001193301|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AY358531|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_001193300|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_022367|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK296693|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK091127|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK290353|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_001193302|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK315547|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##BX640891|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##BC020974|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_014655|SLC25A44|9673|solute carrier family 25, member 44	0.857007	CTCF.p2:13:0.857
chr1	32129580	32129685	reg1001230.p1	16.121	+	NM_012392	-18795	-	CR542139 CU678186 CU680360 BC002773 AK301226 TSC_hg19_v1_chr1_-_32110478 AB018357 AB026628 BC012561 AY359011 AK001420	-19157	-	BC035686 AK290521 NM_001525	-46339	+	M92642 TSC_hg19_v1_chr1_-_32169608	39950	-	TSC_hg19_v1_chr1_-_32169619 NM_001856	40061	-	AB005298 NM_001703	100009	-	NM_012392|PEF1|553115|penta-EF-hand domain containing 1##CR542139|PEF1|553115|penta-EF-hand domain containing 1##BC002773|PEF1|553115|penta-EF-hand domain containing 1##AK301226|PEF1|553115|penta-EF-hand domain containing 1##AB018357|PEF1|553115|penta-EF-hand domain containing 1##AB026628|PEF1|553115|penta-EF-hand domain containing 1##BC012561|PEF1|553115|penta-EF-hand domain containing 1##AY359011|PEF1|553115|penta-EF-hand domain containing 1##AK001420|PEF1|553115|penta-EF-hand domain containing 1##BC035686|HCRTR1|3061|hypocretin (orexin) receptor 1##AK290521|HCRTR1|3061|hypocretin (orexin) receptor 1##NM_001525|HCRTR1|3061|hypocretin (orexin) receptor 1##M92642|COL16A1|1307|collagen, type XVI, alpha 1##NM_001856|COL16A1|1307|collagen, type XVI, alpha 1##AB005298|BAI2|576|brain-specific angiogenesis inhibitor 2##NM_001703|BAI2|576|brain-specific angiogenesis inhibitor 2	0.730327	CTCF.p2:-11:0.675
chr3	195800242	195800367	reg1001699.p1	16.121	+	TSC_hg19_v1_chr3_-_195717156 BC071730 AK300421 AK316025 AK299148	-83173	-	NM_005781 L13738	-164388	-	AK131539 NM_001010938	-177873	-	TSC_hg19_v1_chr3_-_195808954 AB209254 X01060 BC001188	8640	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	8657	-	TSC_hg19_v1_chr3_-_195808984 M11507	8679	-	BC071730|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AK316025|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK299148|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##NM_005781|TNK2|10188|tyrosine kinase, non-receptor, 2##L13738|TNK2|10188|tyrosine kinase, non-receptor, 2##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2##AB209254|TFRC|7037|transferrin receptor (p90, CD71)##X01060|TFRC|7037|transferrin receptor (p90, CD71)##BC001188|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)	0.940723	CTCF.p2:-12:0.941
chr16	56998573	56998696	reg1001199.p1	16.119	+	M30185 AK297699 NM_000078 TSC_hg19_v1_chr16_+_56995861 AK291586 BC025739 EU176529 CU693046 BT020064 M83573	-2797	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	-32493	+	NM_001010989 NM_001010990 NM_014685	-32887	+	TSC_hg19_v1_chr16_+_57023474 AK097030	24826	+	AK074182 NM_032206	52351	+	AF389420 EF452236 TSC_hg19_v1_chr16_+_57054697	56026	+	M30185|CETP|1071|cholesteryl ester transfer protein, plasma##AK297699|CETP|1071|cholesteryl ester transfer protein, plasma##NM_000078|CETP|1071|cholesteryl ester transfer protein, plasma##AK291586|CETP|1071|cholesteryl ester transfer protein, plasma##BC025739|CETP|1071|cholesteryl ester transfer protein, plasma##EU176529|CETP|1071|cholesteryl ester transfer protein, plasma##BT020064|CETP|1071|cholesteryl ester transfer protein, plasma##M83573|CETP|1071|cholesteryl ester transfer protein, plasma##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK097030|NLRC5|84166|NLR family, CARD domain containing 5##AK074182|NLRC5|84166|NLR family, CARD domain containing 5##NM_032206|NLRC5|84166|NLR family, CARD domain containing 5##AF389420|NLRC5|84166|NLR family, CARD domain containing 5##EF452236|NLRC5|84166|NLR family, CARD domain containing 5	1.014429	CTCF.p2:-17:1.000
chr17	1090605	1090717	reg1001060.p1	16.119	+	TSC_hg19_v1_chr17_-_1090565 AK126882 AK124547 NM_001159746	-73	-	AK302682 AB384846 TSC_hg19_v1_chr17_-_1083048 NM_021962 U01147	-7592	-	TSC_hg19_v1_chr17_-_1029059 AK307827	-61587	-	NM_001164405	83196	+	AB090231 NM_172367 BC142615	92303	+	TSC_hg19_v1_chr17_-_1248347 L13388	157695	-	AK126882|ABR|29|active BCR-related gene##AK124547|ABR|29|active BCR-related gene##NM_001159746|ABR|29|active BCR-related gene##AK302682|ABR|29|active BCR-related gene##NM_021962|ABR|29|active BCR-related gene##U01147|ABR|29|active BCR-related gene##AK307827|ABR|29|active BCR-related gene##NM_001164405|BHLHA9|727857|basic helix-loop-helix family, member a9##AB090231|TUSC5|286753|tumor suppressor candidate 5##NM_172367|TUSC5|286753|tumor suppressor candidate 5##BC142615|TUSC5|286753|tumor suppressor candidate 5##L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	1.311486	CTCF.p2:8:0.998
chr1	157125918	157126042	reg1001101.p1	16.117	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-17697	-	TSC_hg19_v1_chr1_-_157108158 L16464	-17830	-	AK131392 NM_001004341	-56381	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	396250	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	441821	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	544547	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	1.812871	CTCF.p2:10:1.000	CTCF.p2:101:0.813
chr17	40555326	40555456	reg1001908.p1	16.117	+	TSC_hg19_v1_chr17_-_40540580 AK291933	-14799	-	TSC_hg19_v1_chr17_-_40540493 L29277 NM_003150 NM_139276 AK301200 AK316139	-14859	-	TSC_hg19_v1_chr17_-_40540461 BC014482 NM_213662 BC000627 BC029783 AK297994	-14977	-	AB464659 TSC_hg19_v1_chr17_-_40575275 BC008849 AK298072 AK074512 AK092406 AK298563 AK314389 AX747528 BC066123 NM_012232	19836	-	TSC_hg19_v1_chr17_+_40610864 L78933 NM_001130020 NM_001130021 NM_005177 Z71460	55472	+	BC017826 TSC_hg19_v1_chr17_+_40610895 AK223554 AK299784	55494	+	AK291933|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##L29277|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_003150|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_139276|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK301200|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK316139|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC014482|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_213662|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC000627|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC029783|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK297994|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC008849|PTRF|284119|polymerase I and transcript release factor##AK298072|PTRF|284119|polymerase I and transcript release factor##AK074512|PTRF|284119|polymerase I and transcript release factor##AK092406|PTRF|284119|polymerase I and transcript release factor##AK298563|PTRF|284119|polymerase I and transcript release factor##AK314389|PTRF|284119|polymerase I and transcript release factor##BC066123|PTRF|284119|polymerase I and transcript release factor##NM_012232|PTRF|284119|polymerase I and transcript release factor##L78933|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_001130020|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_001130021|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_005177|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##Z71460|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##BC017826|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK223554|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK299784|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1	0.988046	CTCF.p2:5:0.988
chr22	18558905	18559045	reg1001729.p1	16.117	+	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	-51714	-	TSC_hg19_v1_chr22_-_18484268 AK127487	-74747	-	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-301641	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	1713	+	TSC_hg19_v1_chr22_+_18560755 NM_001127649 BC016280 BC047320	1792	+	TSC_hg19_v1_chr22_+_18593455 AK056947 NM_001193414 NM_018943	34488	+	AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26##NM_001127649|PEX26|55670|peroxisomal biogenesis factor 26##BC016280|PEX26|55670|peroxisomal biogenesis factor 26##BC047320|PEX26|55670|peroxisomal biogenesis factor 26##AK056947|TUBA8|51807|tubulin, alpha 8##NM_001193414|TUBA8|51807|tubulin, alpha 8##NM_018943|TUBA8|51807|tubulin, alpha 8	0.900975	CTCF.p2:17:0.901
chr7	24852075	24852207	reg1000947.p1	16.117	+	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-54544	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-54802	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	-55074	-	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	167603	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	312736	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	312799	-	NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic	0.990015	CTCF.p2:1:0.990
chr1	8409144	8409292	reg1001990.p1	16.116	+	NM_001080397	-24829	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-322820	-	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	-322857	-	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	74799	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	468374	-	GU170215 NM_001201483	522416	-	NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##GU170215|ENO1|2023|enolase 1, (alpha)##NM_001201483|ENO1|2023|enolase 1, (alpha)	0.9999	CTCF.p2:14:1.000
chr7	44896684	44896799	reg1000872.p1	16.113	+	TSC_hg19_v1_chr7_-_44887698 NM_012412 NM_138635 NM_201436 NM_201516 NM_201517	-9015	-	TSC_hg19_v1_chr7_-_44887667 AK023973	-9072	-	BC014885 AB209001 AK129989 BC000098 BC070169 TSC_hg19_v1_chr7_-_44887654	-9104	-	AB464680 TSC_hg19_v1_chr7_-_44924953 AY039216 NM_033224 BC101735 BC101737	28228	-	AB463131 TSC_hg19_v1_chr7_-_45018615 AK074050	121846	-	BC113544 BC117241 TSC_hg19_v1_chr7_-_45018675 AB290179 AL832302	121921	-	NM_012412|H2AFV|94239|H2A histone family, member V##NM_138635|H2AFV|94239|H2A histone family, member V##NM_201436|H2AFV|94239|H2A histone family, member V##NM_201516|H2AFV|94239|H2A histone family, member V##NM_201517|H2AFV|94239|H2A histone family, member V##AK023973|H2AFV|94239|H2A histone family, member V##BC014885|H2AFV|94239|H2A histone family, member V##AB209001|H2AFV|94239|H2A histone family, member V##AK129989|H2AFV|94239|H2A histone family, member V##BC000098|H2AFV|94239|H2A histone family, member V##BC070169|H2AFV|94239|H2A histone family, member V##AY039216|PURB|5814|purine-rich element binding protein B##NM_033224|PURB|5814|purine-rich element binding protein B##BC101735|PURB|5814|purine-rich element binding protein B##BC101737|PURB|5814|purine-rich element binding protein B##AK074050|MYO1G|64005|myosin IG##BC113544|MYO1G|64005|myosin IG##BC117241|MYO1G|64005|myosin IG##AB290179|MYO1G|64005|myosin IG##AL832302|MYO1G|64005|myosin IG	0.908679	CTCF.p2:-27:0.909
chrX	119219668	119219810	reg1002095.p1	16.112	+	AB464156 DQ890992 DQ894169 BC021719 AK058125 AL590524 AF317219 AL590526 NM_001099685 NM_032498	-8128	-	CU677277 CU689374 BC032442 BC015354 BC016783 BC000940 BC012770 TSC_hg19_v1_chrX_-_119077709 BC018968 BC071686 AL832118 AK026279 AY388958 NM_024528	-142066	-	BC066357 NM_001008534 NM_001008535 NM_178813	-189872	+	AB464155 EU446851 BC103857 BC103858 BC069324 BC069529 AY099086 NM_139282	30071	-	AL590526 NM_001099685 NM_032498 AF317219 AL590524 AK058125 BC021719 AB464156 DQ890992 DQ894169	72822	+	BC113730 BC113732 TSC_hg19_v1_chrX_-_119379092 BC022359 AK093895 AX748357	159339	-	DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##BC032442|NKAP|79576|NFKB activating protein##BC015354|NKAP|79576|NFKB activating protein##BC016783|NKAP|79576|NFKB activating protein##BC000940|NKAP|79576|NFKB activating protein##BC012770|NKAP|79576|NFKB activating protein##BC018968|NKAP|79576|NFKB activating protein##BC071686|NKAP|79576|NFKB activating protein##AL832118|NKAP|79576|NFKB activating protein##AK026279|NKAP|79576|NFKB activating protein##AY388958|NKAP|79576|NFKB activating protein##NM_024528|NKAP|79576|NFKB activating protein##BC066357|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_001008534|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_001008535|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_178813|AKAP14|158798|A kinase (PRKA) anchor protein 14##EU446851|RHOXF1|158800|Rhox homeobox family, member 1##BC103857|RHOXF1|158800|Rhox homeobox family, member 1##BC103858|RHOXF1|158800|Rhox homeobox family, member 1##BC069324|RHOXF1|158800|Rhox homeobox family, member 1##BC069529|RHOXF1|158800|Rhox homeobox family, member 1##AY099086|RHOXF1|158800|Rhox homeobox family, member 1##NM_139282|RHOXF1|158800|Rhox homeobox family, member 1##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##BC113730|NKAPP1|158801|NFKB activating protein pseudogene 1##BC113732|NKAPP1|158801|NFKB activating protein pseudogene 1##BC022359|NKAPP1|158801|NFKB activating protein pseudogene 1##AK093895|NKAPP1|158801|NFKB activating protein pseudogene 1	1.041009	CTCF.p2:-8:0.983
chr11	31979781	31979914	reg1001956.p1	16.110	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-140369	-	AB209177 TSC_hg19_v1_chr11_-_31832871 BX640762 NM_000280 NM_001604	-146978	-	BC011953 TSC_hg19_v1_chr11_-_31832790	-147060	-	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	132630	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	132852	+	AK093168 BC032861 NM_001198551 NM_001198552	472513	-	AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AB209177|PAX6|5080|paired box 6##BX640762|PAX6|5080|paired box 6##NM_000280|PAX6|5080|paired box 6##NM_001604|PAX6|5080|paired box 6##BC011953|PAX6|5080|paired box 6##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1	0.803356	CTCF.p2:17:0.803
chr1	23425351	23425469	reg1001484.p1	16.110	+	TSC_hg19_v1_chr1_+_23345985 AB011173 BC040194 AK290328 BC048134	-79362	+	TSC_hg19_v1_chr1_+_23345960 NM_001009999 NM_015013	-79455	+	NM_001242521	-83068	-	TSC_hg19_v1_chr1_-_23495311 BC051733 BC002428	69897	-	TSC_hg19_v1_chr1_-_23495331 BC016175	69926	-	TSC_hg19_v1_chr1_-_23495350 NM_001142546 NM_033631	69940	-	AB011173|KDM1A|23028|lysine (K)-specific demethylase 1A##BC040194|KDM1A|23028|lysine (K)-specific demethylase 1A##AK290328|KDM1A|23028|lysine (K)-specific demethylase 1A##BC048134|KDM1A|23028|lysine (K)-specific demethylase 1A##NM_001009999|KDM1A|23028|lysine (K)-specific demethylase 1A##NM_015013|KDM1A|23028|lysine (K)-specific demethylase 1A##NM_001242521|LOC729059|729059|uncharacterized LOC729059##BC051733|LUZP1|7798|leucine zipper protein 1##BC002428|LUZP1|7798|leucine zipper protein 1##BC016175|LUZP1|7798|leucine zipper protein 1##NM_001142546|LUZP1|7798|leucine zipper protein 1##NM_033631|LUZP1|7798|leucine zipper protein 1	0.956384	CTCF.p2:-11:0.956
chr7	73140177	73140300	reg1001859.p1	16.109	+	TSC_hg19_v1_chr7_-_73133986 AB086954 CR457018 D37932 AB464271 GQ129291 GQ129292 L37792 AK313980 BC064644 BC000444 BC003011 AK299959 NM_001165903 NM_004603	-6235	-	TSC_hg19_v1_chr7_-_73123431 U12918	-16803	-	TSC_hg19_v1_chr7_+_73097930 AK091162 AX746819 BC011696 AJ224442 BC000169 AB590720 CU680014 AF218007	-42224	+	AF217971 BC011712 TSC_hg19_v1_chr7_-_73153133 BC067750	12884	-	TSC_hg19_v1_chr7_-_73153173 BC008251 AF412030 AF412031 AF412032 AY053499 AY053500 NM_001145364 NM_148912 NM_148913	12943	-	TSC_hg19_v1_chr7_-_73184607 AB000714 BC009083 BC016056 AK313276 NM_001306	44333	-	AB086954|STX1A|6804|syntaxin 1A (brain)##CR457018|STX1A|6804|syntaxin 1A (brain)##D37932|STX1A|6804|syntaxin 1A (brain)##GQ129291|STX1A|6804|syntaxin 1A (brain)##GQ129292|STX1A|6804|syntaxin 1A (brain)##L37792|STX1A|6804|syntaxin 1A (brain)##AK313980|STX1A|6804|syntaxin 1A (brain)##BC064644|STX1A|6804|syntaxin 1A (brain)##BC000444|STX1A|6804|syntaxin 1A (brain)##BC003011|STX1A|6804|syntaxin 1A (brain)##AK299959|STX1A|6804|syntaxin 1A (brain)##NM_001165903|STX1A|6804|syntaxin 1A (brain)##NM_004603|STX1A|6804|syntaxin 1A (brain)##U12918|STX1A|6804|syntaxin 1A (brain)##AK091162|WBSCR22|114049|Williams Beuren syndrome chromosome region 22##BC011696|WBSCR22|114049|Williams Beuren syndrome chromosome region 22##AJ224442|WBSCR22|114049|Williams Beuren syndrome chromosome region 22##BC000169|WBSCR22|114049|Williams Beuren syndrome chromosome region 22##AF218007|WBSCR22|114049|Williams Beuren syndrome chromosome region 22##AF217971|ABHD11|83451|abhydrolase domain containing 11##BC011712|ABHD11|83451|abhydrolase domain containing 11##BC067750|ABHD11|83451|abhydrolase domain containing 11##BC008251|ABHD11|83451|abhydrolase domain containing 11##AF412030|ABHD11|83451|abhydrolase domain containing 11##AF412031|ABHD11|83451|abhydrolase domain containing 11##AF412032|ABHD11|83451|abhydrolase domain containing 11##AY053499|ABHD11|83451|abhydrolase domain containing 11##AY053500|ABHD11|83451|abhydrolase domain containing 11##NM_001145364|ABHD11|83451|abhydrolase domain containing 11##NM_148912|ABHD11|83451|abhydrolase domain containing 11##NM_148913|ABHD11|83451|abhydrolase domain containing 11##AB000714|CLDN3|1365|claudin 3##BC009083|CLDN3|1365|claudin 3##BC016056|CLDN3|1365|claudin 3##AK313276|CLDN3|1365|claudin 3##NM_001306|CLDN3|1365|claudin 3	0.997525	CTCF.p2:6:0.998
chr17	81153534	81153714	reg1000083.p2	16.108	+	TSC_hg19_v1_chr17_+_81037508 BC082252 NM_001004431 BC118558 BC118638	-116082	+	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	-143955	-	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	-147154	-	None	None	None	None	None	None	None	None	None	BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like##NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1	2.931006	CTCF.p2:8:0.977	CTCF.p2:-59:0.977	CTCF.p2:76:0.977
chr20	42709506	42709623	reg1000966.p2	16.107	+	NM_001098798	-135029	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	-164771	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	-166077	+	AL132999 TSC_hg19_v1_chr20_-_42815818 AK304863	106229	-	BC029957 NM_020433 NM_175913	106653	-	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	129792	-	NM_001098798|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##AL132999|JPH2|57158|junctophilin 2##AK304863|JPH2|57158|junctophilin 2##BC029957|JPH2|57158|junctophilin 2##NM_020433|JPH2|57158|junctophilin 2##NM_175913|JPH2|57158|junctophilin 2##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111	0.996069	CTCF.p2:8:0.996
chr5	172124600	172124745	reg1001982.p1	16.105	+	AF275799 TSC_hg19_v1_chr5_-_172083715	-41029	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-56419	+	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	-243169	-	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	73539	-	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	136646	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	261776	+	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1	0.711431	CTCF.p2:22:0.711
chr8	119755984	119756113	reg1001514.p1	16.104	+	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	-121841	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	-121923	-	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	-632087	-	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	208172	-	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	323421	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	464591	+	NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)	0.998228	CTCF.p2:-14:0.998
chr1	113346920	113347037	reg1001635.p1	16.103	+	NM_001004440 NM_182759 BC112268 BC117479 BC143949 BC144042 BC144043 AY325116 AY325119	-83785	+	BC011803 BC064628 AL133644 AB527803 EU832164 EU832258 AK093270 AX748024 BC073828 NM_005167	-89067	-	TSC_hg19_v1_chr1_-_113250031 NM_001042678 NM_175744	-96952	-	BC045664 AK094064 NM_001166496 AF239919 AL162079 TSC_hg19_v1_chr1_-_113498818 AK296688 AK312500 BC026317	151739	-	TSC_hg19_v1_chr1_-_113498861 AK303603 AJ438943 NM_003051	151923	-	TSC_hg19_v1_chr1_+_113499054 BC023568 BC047723 BC062295 BX648855	152055	+	NM_001004440|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##NM_182759|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC112268|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC117479|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC143949|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144042|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144043|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325116|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325119|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC011803|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC064628|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AL133644|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832164|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832258|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AK093270|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC073828|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_005167|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_001042678|RHOC|389|ras homolog gene family, member C##NM_175744|RHOC|389|ras homolog gene family, member C##BC045664|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK094064|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_001166496|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AF239919|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AL162079|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK296688|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK312500|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC026317|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK303603|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AJ438943|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_003051|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC062295|LOC100506392|100506392|uncharacterized LOC100506392##BX648855|LOC100506392|100506392|uncharacterized LOC100506392	0.111864	
chr14	74195564	74195689	reg1001023.p1	16.103	+	CR457112 BC039577 AK290980 TSC_hg19_v1_chr14_-_74181085 AF320308 BC007712 NM_006029	-14865	-	NM_001201366 NM_031427 AF542071 BC005343 AL833654 AK315392	-83973	+	DQ082756 NM_001037162	-112079	+	BC015668 TSC_hg19_v1_chr14_-_74226640	31012	-	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	31339	-	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	58293	-	CR457112|PNMA1|9240|paraneoplastic antigen MA1##BC039577|PNMA1|9240|paraneoplastic antigen MA1##AK290980|PNMA1|9240|paraneoplastic antigen MA1##AF320308|PNMA1|9240|paraneoplastic antigen MA1##BC007712|PNMA1|9240|paraneoplastic antigen MA1##NM_006029|PNMA1|9240|paraneoplastic antigen MA1##NM_001201366|DNAL1|83544|dynein, axonemal, light chain 1##NM_031427|DNAL1|83544|dynein, axonemal, light chain 1##AF542071|DNAL1|83544|dynein, axonemal, light chain 1##BC005343|DNAL1|83544|dynein, axonemal, light chain 1##AL833654|DNAL1|83544|dynein, axonemal, light chain 1##AK315392|DNAL1|83544|dynein, axonemal, light chain 1##DQ082756|ACOT6|641372|acyl-CoA thioesterase 6##NM_001037162|ACOT6|641372|acyl-CoA thioesterase 6##BC015668|C14orf43|91748|chromosome 14 open reading frame 43##AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43	0.997593	CTCF.p2:-7:0.998
chr6	112031222	112031376	reg1001663.p1	16.103	+	NM_001164281 NM_147686	-103826	-	TSC_hg19_v1_chr6_-_111927082 AL050289 AK310141 AF136406 AF136407	-104127	-	BC002823 AF085921 AF136405 TSC_hg19_v1_chr6_-_111927072 AK310922 AK025351 AK314415	-104232	-	AB451293 AB451426 AB528738 CU689398 S74774 NM_153047	9959	-	BC032496 NM_153048	49009	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	163236	-	NM_001164281|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_147686|TRAF3IP2|10758|TRAF3 interacting protein 2##AL050289|TRAF3IP2|10758|TRAF3 interacting protein 2##AK310141|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136406|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136407|TRAF3IP2|10758|TRAF3 interacting protein 2##BC002823|TRAF3IP2|10758|TRAF3 interacting protein 2##AF085921|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136405|TRAF3IP2|10758|TRAF3 interacting protein 2##AK310922|TRAF3IP2|10758|TRAF3 interacting protein 2##AK025351|TRAF3IP2|10758|TRAF3 interacting protein 2##AK314415|TRAF3IP2|10758|TRAF3 interacting protein 2##AB451293|FYN|2534|FYN oncogene related to SRC, FGR, YES##AB451426|FYN|2534|FYN oncogene related to SRC, FGR, YES##S74774|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153047|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES	0.746302	CTCF.p2:-28:0.746
chr8	73067532	73067654	reg1000945.p2	16.102	+	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	-79759	-	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-310885	-	AF060154 TSC_hg19_v1_chr8_-_72756646	-310965	-	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	382050	+	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	853519	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	937849	-	NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##AF060154|MSC|9242|musculin##AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84	0.997367	CTCF.p2:20:0.997
chr9	112665965	112666096	reg1001741.p1	16.101	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	-123415	+	BC039306 NM_001037293 AK095003	-262961	+	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	-405441	-	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	144879	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	144933	+	NM_001136562 AK300427	221762	+	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2	0.877838	CTCF.p2:-19:0.878
chr1	205294685	205294810	reg1001158.p2	16.100	+	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	-3904	-	AY358192 TSC_hg19_v1_chr1_+_205236667	-58113	+	AK293734 NM_001242925	-96689	+	BC036076 TSC_hg19_v1_chr1_-_205313311	18563	-	AK299227 AK001610 NM_018203 AK096590	31293	-	AB084764 AB084765 AB085610 AB096677 AB096678 AB096679 AB096680 AB096681 AB096682 BC036636 AK302392 NM_001001552 NM_001199050 NM_001199051 NM_001199052	96449	-	AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK293734|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_001242925|TMCC2|9911|transmembrane and coiled-coil domain family 2##BC036076|KLHDC8A|55220|kelch domain containing 8A##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A##AB084764|LEMD1|93273|LEM domain containing 1##AB084765|LEMD1|93273|LEM domain containing 1##AB085610|LEMD1|93273|LEM domain containing 1##AB096677|LEMD1|93273|LEM domain containing 1##AB096678|LEMD1|93273|LEM domain containing 1##AB096679|LEMD1|93273|LEM domain containing 1##AB096680|LEMD1|93273|LEM domain containing 1##AB096681|LEMD1|93273|LEM domain containing 1##AB096682|LEMD1|93273|LEM domain containing 1##BC036636|LEMD1|93273|LEM domain containing 1##AK302392|LEMD1|93273|LEM domain containing 1##NM_001001552|LEMD1|93273|LEM domain containing 1##NM_001199050|LEMD1|93273|LEM domain containing 1##NM_001199051|LEMD1|93273|LEM domain containing 1##NM_001199052|LEMD1|93273|LEM domain containing 1	0.881297	CTCF.p2:4:0.881
chr15	38646642	38646762	reg1001128.p1	16.100	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	-101680	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	-102307	+	BC029221 NM_152453	-419246	+	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	99643	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	210229	-	AK093014 AX747856 BC119016 BC119810 NM_207444	342096	+	NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53	0.952988	CTCF.p2:14:0.953
chr7	66022677	66022795	reg1001819.p1	16.100	+	TSC_hg19_v1_chr7_+_65958724 AY726579	-64033	+	TSC_hg19_v1_chr7_+_65670320 NM_003596 AK307053 AK313098	-352427	+	TSC_hg19_v1_chr7_+_65579866 BC040107 BX647867 U51134	-442834	+	TSC_hg19_v1_chr7_-_66057374 BC080520 BC057835 BC067867 AK310548 BC103766 AK310370 AK296922	34625	-	TSC_hg19_v1_chr7_+_66093867 NM_001167961 NM_153033	71138	+	BC042482 TSC_hg19_v1_chr7_+_66093944 AK056631 AK127790	71206	+	NM_003596|TPST1|8460|tyrosylprotein sulfotransferase 1##AK307053|TPST1|8460|tyrosylprotein sulfotransferase 1##AK313098|TPST1|8460|tyrosylprotein sulfotransferase 1##BC040107|CRCP|27297|CGRP receptor component##BX647867|CRCP|27297|CGRP receptor component##U51134|CRCP|27297|CGRP receptor component##AK310548|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##BC103766|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK310370|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK296922|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##NM_001167961|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_153033|KCTD7|154881|potassium channel tetramerisation domain containing 7##BC042482|KCTD7|154881|potassium channel tetramerisation domain containing 7##AK056631|KCTD7|154881|potassium channel tetramerisation domain containing 7	0.964566	CTCF.p2:-1:0.950
chr19	19643142	19643269	reg1001884.p1	16.099	+	NM_001190328 NM_198537 TSC_hg19_v1_chr19_+_19639680 AK126916 BC020948 AB464360 DQ778079 DQ778080	-3500	+	NM_015965 TSC_hg19_v1_chr19_+_19627033 BC009189 AK298891 AK293859 AK293965 BC000589 AF286697	-16169	+	TSC_hg19_v1_chr19_+_19626536 AF261134	-16640	+	AK127735 BC068256 NM_153221 TSC_hg19_v1_chr19_+_19649088	5867	+	TSC_hg19_v1_chr19_+_19649101 AK314213 AF542080	5901	+	BC033067 BC143092 AK097427 AK301631 BC143588 BC143589 TSC_hg19_v1_chr19_-_19729548 BC141859 NM_025245	86376	-	NM_001190328|YJEFN3|374887|YjeF N-terminal domain containing 3##NM_198537|YJEFN3|374887|YjeF N-terminal domain containing 3##AK126916|YJEFN3|374887|YjeF N-terminal domain containing 3##BC020948|YJEFN3|374887|YjeF N-terminal domain containing 3##DQ778079|YJEFN3|374887|YjeF N-terminal domain containing 3##DQ778080|YJEFN3|374887|YjeF N-terminal domain containing 3##NM_015965|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC009189|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AK293859|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC000589|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AF286697|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AK127735|CILP2|148113|cartilage intermediate layer protein 2##BC068256|CILP2|148113|cartilage intermediate layer protein 2##NM_153221|CILP2|148113|cartilage intermediate layer protein 2##AK314213|CILP2|148113|cartilage intermediate layer protein 2##AF542080|CILP2|148113|cartilage intermediate layer protein 2##BC033067|PBX4|80714|pre-B-cell leukemia homeobox 4##BC143092|PBX4|80714|pre-B-cell leukemia homeobox 4##AK097427|PBX4|80714|pre-B-cell leukemia homeobox 4##AK301631|PBX4|80714|pre-B-cell leukemia homeobox 4##BC143588|PBX4|80714|pre-B-cell leukemia homeobox 4##BC143589|PBX4|80714|pre-B-cell leukemia homeobox 4##BC141859|PBX4|80714|pre-B-cell leukemia homeobox 4##NM_025245|PBX4|80714|pre-B-cell leukemia homeobox 4	0.999763	CTCF.p2:-5:1.000
chr14	91639589	91639727	reg1001578.p1	16.095	+	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-58631	+	AK123532 TSC_hg19_v1_chr14_+_91580717 BC065558 BX248782 AK091394 AK022564	-58909	+	TSC_hg19_v1_chr14_+_91580472 AK023200	-59146	+	BC128536 NM_001177676	71193	-	BC098567 NM_003485	80536	-	TSC_hg19_v1_chr14_-_91884159 AF070587	244490	-	NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AK123532|C14orf159|80017|chromosome 14 open reading frame 159##BC065558|C14orf159|80017|chromosome 14 open reading frame 159##BX248782|C14orf159|80017|chromosome 14 open reading frame 159##AK091394|C14orf159|80017|chromosome 14 open reading frame 159##AK022564|C14orf159|80017|chromosome 14 open reading frame 159##AK023200|C14orf159|80017|chromosome 14 open reading frame 159##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##AF070587|CCDC88C|440193|coiled-coil domain containing 88C	0.999943	CTCF.p2:18:1.000
chr2	21185962	21186081	reg1001747.p1	16.095	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	-163168	-	AF522369 NM_182828	-319598	+	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	-335173	-	M36676 TSC_hg19_v1_chr2_-_21225654 M31030	39672	-	TSC_hg19_v1_chr2_-_21228195 X03325	42227	-	X03045 TSC_hg19_v1_chr2_-_21230697	44616	-	AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##M36676|APOB|338|apolipoprotein B (including Ag(x) antigen)##M31030|APOB|338|apolipoprotein B (including Ag(x) antigen)##X03325|APOB|338|apolipoprotein B (including Ag(x) antigen)##X03045|APOB|338|apolipoprotein B (including Ag(x) antigen)	0.999814	CTCF.p2:2:1.000
chr5	173400279	173400410	reg1001686.p1	16.095	+	TSC_hg19_v1_chr5_+_173315343 NM_030627	-84966	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-356671	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-356716	-	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	15846	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	72367	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	72408	+	NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein	1.023412	CTCF.p2:8:1.000
chr10	124058410	124058536	reg1001767.p1	16.092	+	AK058088 NM_144587 BC109261 BC109262	-27644	+	NM_006997 NM_206860 TSC_hg19_v1_chr10_+_123923144 BC141837 BC142673 AF095791	-135242	+	BC039311 TSC_hg19_v1_chr10_+_123923007	-135498	+	NM_001001974 TSC_hg19_v1_chr10_+_124134144	75646	+	AK314660 TSC_hg19_v1_chr10_+_124134274 BC001136	75772	+	AK057463 NM_001195608	87111	+	AK058088|BTBD16|118663|BTB (POZ) domain containing 16##NM_144587|BTBD16|118663|BTB (POZ) domain containing 16##BC109261|BTBD16|118663|BTB (POZ) domain containing 16##BC109262|BTBD16|118663|BTB (POZ) domain containing 16##NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_001001974|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##AK314660|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##BC001136|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##AK057463|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##NM_001195608|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	0.993992	CTCF.p2:-7:0.994
chr16	27190946	27191074	reg1001555.p1	16.091	+	NM_001145545 BC031257 AK311574	-112763	+	AF105378 NM_006040	-1487664	+	TSC_hg19_v1_chr16_-_25269141 AK303472	-1921805	-	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	23817	+	AK297166 NM_001145348	24285	+	TSC_hg19_v1_chr16_-_27280055 AK315674	89042	-	NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5##AK315674|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)	0.425306	CTCF.p2:-21:0.425
chr19	55929631	55929776	reg1001942.p1	16.090	+	NM_014501 TSC_hg19_v1_chr19_-_55919377	-10349	-	BC066948 M91670 TSC_hg19_v1_chr19_-_55919157 AB062397 BC004236 BC007554 BC065364	-10634	-	TSC_hg19_v1_chr19_+_55897305 BC010182 BC010173 U14969	-32387	+	NM_001145176	24526	-	BC017344 TSC_hg19_v1_chr19_-_55972980	43260	-	AK311540 TSC_hg19_v1_chr19_-_55973007 AK027122	43306	-	NM_014501|UBE2S|27338|ubiquitin-conjugating enzyme E2S##BC066948|UBE2S|27338|ubiquitin-conjugating enzyme E2S##M91670|UBE2S|27338|ubiquitin-conjugating enzyme E2S##AB062397|UBE2S|27338|ubiquitin-conjugating enzyme E2S##BC004236|UBE2S|27338|ubiquitin-conjugating enzyme E2S##BC007554|UBE2S|27338|ubiquitin-conjugating enzyme E2S##BC065364|UBE2S|27338|ubiquitin-conjugating enzyme E2S##BC010182|RPL28|6158|ribosomal protein L28##BC010173|RPL28|6158|ribosomal protein L28##U14969|RPL28|6158|ribosomal protein L28##NM_001145176|SHISA7|729956|shisa homolog 7 (Xenopus laevis)##BC017344|ISOC2|79763|isochorismatase domain containing 2##AK311540|ISOC2|79763|isochorismatase domain containing 2##AK027122|ISOC2|79763|isochorismatase domain containing 2	0.526386	CTCF.p2:15:0.526
chrX	128957219	128957358	reg1001425.p1	16.089	+	TSC_hg19_v1_chrX_+_128913898 AK314869 AK292023 BC051881 AL049683 AB528892	-43304	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	-43401	+	AK300954 U90724 NM_003399 BC126174 BC143901	-84312	+	AK001524 BC000035 AB209807 TSC_hg19_v1_chrX_-_128977481 NM_001008222	20137	-	TSC_hg19_v1_chrX_-_128977856 AL161962 AK096967 AF151847 AY358558 BC006200 BC012826 BC003128 AK001112 AY952881 NM_016032	20540	-	TSC_hg19_v1_chrX_+_129040144 NM_001166221 NM_006649 AK291918 AK298578 BC009649 BC001149 AK304563 BC014987 AF039694 AB590128 CU679427 DQ892549 DQ895760	82843	+	AK314869|SASH3|54440|SAM and SH3 domain containing 3##AK292023|SASH3|54440|SAM and SH3 domain containing 3##BC051881|SASH3|54440|SAM and SH3 domain containing 3##AL049683|SASH3|54440|SAM and SH3 domain containing 3##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3##AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_001166221|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_006649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK291918|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK298578|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC009649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC001149|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK304563|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC014987|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ892549|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ895760|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	0.945793	CTCF.p2:23:0.946
chr2	86448347	86448468	reg1001746.p1	16.088	+	NM_016622 NM_145644 TSC_hg19_v1_chr2_+_86426604 BC020651 AK074352 AK314555 AK314577 AF208849 AL832982 CU676602	-21823	+	NM_001100169 NM_001100170 NM_006839	-25515	-	TSC_hg19_v1_chr2_-_86422614 BX537369 L42572	-25752	-	AY562239 CR457301 CU687956 AK297201 TSC_hg19_v1_chr2_-_86564750 BC064846 AK294300 AK297359 AK297373 AK299334 AK023172 NM_001164731 NM_001164732 NM_022912	116326	-	AK297287 NM_001164730	116798	-	NM_018433	219863	+	NM_016622|MRPL35|51318|mitochondrial ribosomal protein L35##NM_145644|MRPL35|51318|mitochondrial ribosomal protein L35##BC020651|MRPL35|51318|mitochondrial ribosomal protein L35##AK074352|MRPL35|51318|mitochondrial ribosomal protein L35##AK314555|MRPL35|51318|mitochondrial ribosomal protein L35##AK314577|MRPL35|51318|mitochondrial ribosomal protein L35##AF208849|MRPL35|51318|mitochondrial ribosomal protein L35##AL832982|MRPL35|51318|mitochondrial ribosomal protein L35##NM_001100169|IMMT|10989|inner membrane protein, mitochondrial##NM_001100170|IMMT|10989|inner membrane protein, mitochondrial##NM_006839|IMMT|10989|inner membrane protein, mitochondrial##BX537369|IMMT|10989|inner membrane protein, mitochondrial##L42572|IMMT|10989|inner membrane protein, mitochondrial##AY562239|REEP1|65055|receptor accessory protein 1##CR457301|REEP1|65055|receptor accessory protein 1##AK297201|REEP1|65055|receptor accessory protein 1##BC064846|REEP1|65055|receptor accessory protein 1##AK294300|REEP1|65055|receptor accessory protein 1##AK297359|REEP1|65055|receptor accessory protein 1##AK297373|REEP1|65055|receptor accessory protein 1##AK299334|REEP1|65055|receptor accessory protein 1##AK023172|REEP1|65055|receptor accessory protein 1##NM_001164731|REEP1|65055|receptor accessory protein 1##NM_001164732|REEP1|65055|receptor accessory protein 1##NM_022912|REEP1|65055|receptor accessory protein 1##AK297287|REEP1|65055|receptor accessory protein 1##NM_001164730|REEP1|65055|receptor accessory protein 1##NM_018433|KDM3A|55818|lysine (K)-specific demethylase 3A	0.072111	
chr1	110527153	110527275	reg1001119.p2	16.087	+	BC021117 TSC_hg19_v1_chr1_+_110453470 AK291660 M37435 M27087 U22386 AB527768 M64592	-73664	+	NM_000757 NM_172210 NM_172212	-73982	+	AY074930 TSC_hg19_v1_chr1_-_110306546 AK307932 AK310979 AK308196 AK025175 AK225235 BC012926 AK292198 AK290261 NM_024526 NM_133181 NM_139053	-220630	-	AF315687 TSC_hg19_v1_chr1_+_110527316	97	+	TSC_hg19_v1_chr1_+_110527386 BC111563 NM_001242673 NM_006621 BC065254	147	+	BC010681 TSC_hg19_v1_chr1_+_110527405	188	+	BC021117|CSF1|1435|colony stimulating factor 1 (macrophage)##AK291660|CSF1|1435|colony stimulating factor 1 (macrophage)##M37435|CSF1|1435|colony stimulating factor 1 (macrophage)##M27087|CSF1|1435|colony stimulating factor 1 (macrophage)##U22386|CSF1|1435|colony stimulating factor 1 (macrophage)##M64592|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_000757|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172210|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172212|CSF1|1435|colony stimulating factor 1 (macrophage)##AY074930|EPS8L3|79574|EPS8-like 3##AK307932|EPS8L3|79574|EPS8-like 3##AK310979|EPS8L3|79574|EPS8-like 3##AK308196|EPS8L3|79574|EPS8-like 3##AK025175|EPS8L3|79574|EPS8-like 3##AK225235|EPS8L3|79574|EPS8-like 3##BC012926|EPS8L3|79574|EPS8-like 3##AK292198|EPS8L3|79574|EPS8-like 3##AK290261|EPS8L3|79574|EPS8-like 3##NM_024526|EPS8L3|79574|EPS8-like 3##NM_133181|EPS8L3|79574|EPS8-like 3##NM_139053|EPS8L3|79574|EPS8-like 3##AF315687|AHCYL1|10768|adenosylhomocysteinase-like 1##BC111563|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_001242673|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_006621|AHCYL1|10768|adenosylhomocysteinase-like 1##BC065254|AHCYL1|10768|adenosylhomocysteinase-like 1##BC010681|AHCYL1|10768|adenosylhomocysteinase-like 1	0.995555	CTCF.p2:0:0.996
chr5	175156937	175157057	reg1001753.p1	16.087	+	NM_022304	-48534	+	TSC_hg19_v1_chr5_+_175085101 AB023487	-71886	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	-71959	+	TSC_hg19_v1_chr5_+_175223538 NM_006650 U35100	66567	+	TSC_hg19_v1_chr5_+_175298517 AY576870 NM_001008220 AK124837	141512	+	TSC_hg19_v1_chr5_+_175298551 AK314177	141548	+	NM_022304|HRH2|3274|histamine receptor H2##AB023487|HRH2|3274|histamine receptor H2##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2##NM_006650|CPLX2|10814|complexin 2##U35100|CPLX2|10814|complexin 2##AY576870|CPLX2|10814|complexin 2##NM_001008220|CPLX2|10814|complexin 2##AK124837|CPLX2|10814|complexin 2##AK314177|CPLX2|10814|complexin 2	0.997543	CTCF.p2:-12:0.998
chr2	134875968	134876104	reg1001646.p1	16.085	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-549998	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-696682	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-1336342	-	NM_002410 D17716 AF113921	135849	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	600520	-	AK125008 NM_138326 BC016018 BC107420 AB071418	720182	+	AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	0.995651	CTCF.p2:-25:0.996
chrX	130050937	130051053	reg1001512.p1	16.082	+	TSC_hg19_v1_chrX_-_130037207 AK000353 NM_006375 NM_182314	-13789	-	TSC_hg19_v1_chrX_-_130037184 BC108713 AL133207 AK289812 AK289837	-13818	-	TSC_hg19_v1_chrX_+_129535955 BC003676 NM_016024 AK292855 BC105582 BC012345 AL050405 BC033750 BC063517 BC010036 BC040433 BC050707	-515042	+	AK128203 NM_144967 AK296748 AX721074	141277	+	BC028312 NM_001170963	372039	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	372267	-	AK000353|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_006375|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_182314|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##BC108713|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AL133207|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289812|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289837|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##BC003676|RBMX2|51634|RNA binding motif protein, X-linked 2##NM_016024|RBMX2|51634|RNA binding motif protein, X-linked 2##AK292855|RBMX2|51634|RNA binding motif protein, X-linked 2##BC105582|RBMX2|51634|RNA binding motif protein, X-linked 2##BC012345|RBMX2|51634|RNA binding motif protein, X-linked 2##AL050405|RBMX2|51634|RNA binding motif protein, X-linked 2##BC033750|RBMX2|51634|RNA binding motif protein, X-linked 2##BC063517|RBMX2|51634|RNA binding motif protein, X-linked 2##BC010036|RBMX2|51634|RNA binding motif protein, X-linked 2##BC040433|RBMX2|51634|RNA binding motif protein, X-linked 2##BC050707|RBMX2|51634|RNA binding motif protein, X-linked 2##AK128203|ARHGAP36|158763|Rho GTPase activating protein 36##NM_144967|ARHGAP36|158763|Rho GTPase activating protein 36##AK296748|ARHGAP36|158763|Rho GTPase activating protein 36##BC028312|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1	0.999903	CTCF.p2:10:1.000
chr7	158769859	158769981	reg1001160.p2	16.078	+	TSC_hg19_v1_chr7_+_158649248 BC014491 NM_018051 CU677023	-120607	+	TSC_hg19_v1_chr7_-_158622236 AB527334 AY368150 NM_020728	-147660	-	TSC_hg19_v1_chr7_-_158622198 AB033054	-147729	-	BT007118 DQ890571 DQ893732 BC010569 AK310386 L36566 U18810 AK308955 NM_003382 X95097	167635	-	None	None	None	None	None	None	BC014491|WDR60|55112|WD repeat domain 60##NM_018051|WDR60|55112|WD repeat domain 60##AY368150|ESYT2|57488|extended synaptotagmin-like protein 2##NM_020728|ESYT2|57488|extended synaptotagmin-like protein 2##AB033054|ESYT2|57488|extended synaptotagmin-like protein 2##BT007118|VIPR2|7434|vasoactive intestinal peptide receptor 2##DQ890571|VIPR2|7434|vasoactive intestinal peptide receptor 2##DQ893732|VIPR2|7434|vasoactive intestinal peptide receptor 2##BC010569|VIPR2|7434|vasoactive intestinal peptide receptor 2##AK310386|VIPR2|7434|vasoactive intestinal peptide receptor 2##L36566|VIPR2|7434|vasoactive intestinal peptide receptor 2##U18810|VIPR2|7434|vasoactive intestinal peptide receptor 2##AK308955|VIPR2|7434|vasoactive intestinal peptide receptor 2##NM_003382|VIPR2|7434|vasoactive intestinal peptide receptor 2##X95097|VIPR2|7434|vasoactive intestinal peptide receptor 2	0.698589	CTCF.p2:7:0.699
chr6	3251811	3251925	reg1000724.p1	16.076	+	BT019930 CR456788 CU674662 BC063610 TSC_hg19_v1_chr6_-_3227888 AK308806 AK289433 AK297568 BC001352 NM_178012	-23997	-	AY159127 CR541958 CU674602 AB528583 DQ892343 DQ895718 BC001194 TSC_hg19_v1_chr6_-_3157779 BC018780 X79535 AK308772 AK312621 NM_001069	-94122	-	TSC_hg19_v1_chr6_+_3118961 AK297518 NM_004332 AK314909 AL832502 AJ617684 X81372	-132917	+	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	7290	+	TSC_hg19_v1_chr6_+_3259232 AK126623 AK095683	7371	+	TSC_hg19_v1_chr6_-_3272352 BC090851 BC022217	20562	-	BT019930|TUBB2B|347733|tubulin, beta 2B class IIb##CR456788|TUBB2B|347733|tubulin, beta 2B class IIb##BC063610|TUBB2B|347733|tubulin, beta 2B class IIb##AK308806|TUBB2B|347733|tubulin, beta 2B class IIb##AK289433|TUBB2B|347733|tubulin, beta 2B class IIb##AK297568|TUBB2B|347733|tubulin, beta 2B class IIb##BC001352|TUBB2B|347733|tubulin, beta 2B class IIb##NM_178012|TUBB2B|347733|tubulin, beta 2B class IIb##AY159127|TUBB2A|7280|tubulin, beta 2A class IIa##CR541958|TUBB2A|7280|tubulin, beta 2A class IIa##DQ892343|TUBB2A|7280|tubulin, beta 2A class IIa##DQ895718|TUBB2A|7280|tubulin, beta 2A class IIa##BC001194|TUBB2A|7280|tubulin, beta 2A class IIa##BC018780|TUBB2A|7280|tubulin, beta 2A class IIa##X79535|TUBB2A|7280|tubulin, beta 2A class IIa##AK312621|TUBB2A|7280|tubulin, beta 2A class IIa##NM_001069|TUBB2A|7280|tubulin, beta 2A class IIa##AK297518|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##NM_004332|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AK314909|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AL832502|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AJ617684|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##X81372|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##BC090851|SLC22A23|63027|solute carrier family 22, member 23##BC022217|SLC22A23|63027|solute carrier family 22, member 23	0.951072	CTCF.p2:0:0.951
chr7	23610353	23610481	reg1000997.p1	16.076	+	CU677835 DQ892442 DQ895653 AB528532 TSC_hg19_v1_chr7_-_23571604 BC069011 BC017094 U53209 AB097048 AK300565 AK311687 AK314801 AK300741 AK310719 AK298815 NM_013293	-38853	-	TSC_hg19_v1_chr7_+_23530136 BC026177	-80250	+	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	-100419	-	TSC_hg19_v1_chr7_+_23637005 NM_138771 AK289911 AY358713 AX721042	26598	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	109406	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	139499	+	DQ892442|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##DQ895653|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC069011|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC017094|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##U53209|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AB097048|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK300565|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK311687|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK314801|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK300741|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK310719|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK298815|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##NM_013293|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_138771|CCDC126|90693|coiled-coil domain containing 126##AK289911|CCDC126|90693|coiled-coil domain containing 126##AY358713|CCDC126|90693|coiled-coil domain containing 126##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31	0.934601	CTCF.p2:-16:0.935
chr1	26324744	26324871	reg1001191.p1	16.075	+	BC001158 U89386 TSC_hg19_v1_chr1_-_26324541 AK313815 D87845 NM_000437	-217	-	NM_203399	-91440	-	BC082228 AB209282 X53305 BX647885 Z11566 AK303692 AK054594 AK311801 D28428 TSC_hg19_v1_chr1_-_26232911 J04991 BC014353 NM_001145454 NM_005563	-91866	-	TSC_hg19_v1_chr1_+_26348265 NM_004455 U67191	23460	+	TSC_hg19_v1_chr1_+_26348308 BC065528	23559	+	AK094027 AX748418 AF370409 BC006251 NM_001004434 NM_032513	47716	-	BC001158|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa##U89386|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa##AK313815|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa##D87845|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa##NM_000437|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa##NM_203399|STMN1|3925|stathmin 1##BC082228|STMN1|3925|stathmin 1##AB209282|STMN1|3925|stathmin 1##X53305|STMN1|3925|stathmin 1##BX647885|STMN1|3925|stathmin 1##Z11566|STMN1|3925|stathmin 1##AK303692|STMN1|3925|stathmin 1##AK054594|STMN1|3925|stathmin 1##AK311801|STMN1|3925|stathmin 1##D28428|STMN1|3925|stathmin 1##J04991|STMN1|3925|stathmin 1##BC014353|STMN1|3925|stathmin 1##NM_001145454|STMN1|3925|stathmin 1##NM_005563|STMN1|3925|stathmin 1##NM_004455|EXTL1|2134|exostoses (multiple)-like 1##U67191|EXTL1|2134|exostoses (multiple)-like 1##BC065528|EXTL1|2134|exostoses (multiple)-like 1##AK094027|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##AF370409|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##BC006251|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##NM_001004434|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##NM_032513|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2	0.982611	CTCF.p2:-3:0.983
chr2	219894524	219894651	reg1001260.p2	16.071	+	AF166331 NM_005209 BC006285 NM_057093 NM_057094	-36464	-	BC023511 NM_017521 Y08976	-44262	-	TSC_hg19_v1_chr2_+_219824381 BC041771 NM_003936 U34051	-70178	+	AK127189 AK302678 AK302688 BC031585 NM_152389 NM_194302 BC047637	11655	-	BC136587 BC136588 NM_002181	30650	-	TSC_hg19_v1_chr2_-_220025558 BC012732 AK022672 AJ972687 BC030986 NM_024782	130952	-	AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2##BC023511|FEV|54738|FEV (ETS oncogene family)##NM_017521|FEV|54738|FEV (ETS oncogene family)##Y08976|FEV|54738|FEV (ETS oncogene family)##BC041771|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##NM_003936|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##U34051|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##AK127189|CCDC108|255101|coiled-coil domain containing 108##AK302678|CCDC108|255101|coiled-coil domain containing 108##AK302688|CCDC108|255101|coiled-coil domain containing 108##BC031585|CCDC108|255101|coiled-coil domain containing 108##NM_152389|CCDC108|255101|coiled-coil domain containing 108##NM_194302|CCDC108|255101|coiled-coil domain containing 108##BC047637|CCDC108|255101|coiled-coil domain containing 108##BC136587|IHH|3549|Indian hedgehog##BC136588|IHH|3549|Indian hedgehog##NM_002181|IHH|3549|Indian hedgehog##BC012732|NHEJ1|79840|nonhomologous end-joining factor 1##AK022672|NHEJ1|79840|nonhomologous end-joining factor 1##AJ972687|NHEJ1|79840|nonhomologous end-joining factor 1##BC030986|NHEJ1|79840|nonhomologous end-joining factor 1##NM_024782|NHEJ1|79840|nonhomologous end-joining factor 1	0.999866	CTCF.p2:-4:1.000
chr3	151000819	151000960	reg1001886.p1	16.070	+	BC034989 D13626 NM_014879	-4698	-	AK289617 NM_001081455	-33940	-	AF002986 BC036815 NM_013308	-79923	-	AF237763 BC112941 BC117565 AB031548 BC132888 BC132890 AK027784 NM_023915	33685	-	BC041116 JF810883 BC029363 AK313208 NM_176894	46433	-	AF313449 AF321815 NM_176876	57622	-	BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##AK289617|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_001081455|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##AF002986|GPR171|29909|G protein-coupled receptor 171##BC036815|GPR171|29909|G protein-coupled receptor 171##NM_013308|GPR171|29909|G protein-coupled receptor 171##AF237763|GPR87|53836|G protein-coupled receptor 87##BC112941|GPR87|53836|G protein-coupled receptor 87##BC117565|GPR87|53836|G protein-coupled receptor 87##AB031548|GPR87|53836|G protein-coupled receptor 87##BC132888|GPR87|53836|G protein-coupled receptor 87##BC132890|GPR87|53836|G protein-coupled receptor 87##AK027784|GPR87|53836|G protein-coupled receptor 87##NM_023915|GPR87|53836|G protein-coupled receptor 87##BC041116|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##BC029363|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##AK313208|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##NM_176894|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##AF313449|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AF321815|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##NM_176876|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	0.89947	CTCF.p2:19:0.899
chr6	131438040	131438159	reg1001088.p2	16.070	+	TSC_hg19_v1_chr6_-_131384387 AK295124 NM_001135554 NM_001135555 NM_001199388 NM_001431	-53675	-	AF027299 TSC_hg19_v1_chr6_-_131384381 BC034718 AB209522	-53748	-	CR749262 CR936793 NM_001252660	-116212	-	NM_016377 TSC_hg19_v1_chr6_+_131456855 AK300587	18748	+	NM_004842 NM_138633	133199	+	NM_000045 NM_001244438 AY074488 BC005321 TSC_hg19_v1_chr6_+_131894365 M14502 BC020653 CU676606 AB590280 DQ892039 DQ895230 BT006741	456283	+	AK295124|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001135554|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001135555|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199388|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001431|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AF027299|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##BC034718|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AB209522|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_016377|AKAP7|9465|A kinase (PRKA) anchor protein 7##AK300587|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_000045|ARG1|383|arginase, liver##NM_001244438|ARG1|383|arginase, liver##AY074488|ARG1|383|arginase, liver##BC005321|ARG1|383|arginase, liver##M14502|ARG1|383|arginase, liver##BC020653|ARG1|383|arginase, liver##DQ892039|ARG1|383|arginase, liver##DQ895230|ARG1|383|arginase, liver##BT006741|ARG1|383|arginase, liver	0.995082	CTCF.p2:6:0.995
chr15	39872483	39872600	reg1001019.p2	16.068	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	-329616	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-883743	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-1015610	-	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	788	+	AK093308 AX748045 BC045191 NM_152597	202487	-	AK091251 TSC_hg19_v1_chr15_+_40075106	202565	+	BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.799135	CTCF.p2:0:0.799
chr4	89140307	89140445	reg1002107.p1	16.066	+	BC021281 NM_004827 AF151530	-60339	-	TSC_hg19_v1_chr4_+_88928803 BC112261 BC112263 NM_000297 U50928	-211568	+	AY956318 X13694 TSC_hg19_v1_chr4_+_88896900	-243463	+	TSC_hg19_v1_chr4_-_89205714 AL834271 AK314417 AK054678 AY157615 AY994097 AF351614 BC020850 BC037552	65351	-	AY435431 NM_152542 TSC_hg19_v1_chr4_-_89205908 AL834167	65527	-	TSC_hg19_v1_chr4_+_89299890 AF336798 AY653201 AY653202 AY653203 NM_001165136 NM_017912	159506	+	BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2##NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2##BC112261|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##BC112263|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##NM_000297|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##U50928|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##AY956318|SPP1|6696|secreted phosphoprotein 1##X13694|SPP1|6696|secreted phosphoprotein 1##AL834271|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AK314417|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AK054678|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY157615|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY994097|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AF351614|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC020850|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC037552|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY435431|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##NM_152542|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AL834167|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AF336798|HERC6|55008|hect domain and RLD 6##AY653201|HERC6|55008|hect domain and RLD 6##AY653202|HERC6|55008|hect domain and RLD 6##AY653203|HERC6|55008|hect domain and RLD 6##NM_001165136|HERC6|55008|hect domain and RLD 6##NM_017912|HERC6|55008|hect domain and RLD 6	0.862389	CTCF.p2:-8:0.862
chr21	46859403	46859528	reg1001531.p1	16.065	+	AB590554 TSC_hg19_v1_chr21_+_46825311	-34164	+	TSC_hg19_v1_chr21_+_46825079 AK130835 AF018082 NM_130445 BC063833	-34397	+	TSC_hg19_v1_chr21_+_46707955 BC022830 BC033767	-151490	+	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	15953	+	AK303168 NM_001205207	95069	-	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	102867	-	AK130835|COL18A1|80781|collagen, type XVIII, alpha 1##AF018082|COL18A1|80781|collagen, type XVIII, alpha 1##NM_130445|COL18A1|80781|collagen, type XVIII, alpha 1##BC063833|COL18A1|80781|collagen, type XVIII, alpha 1##BC022830|LOC642852|642852|uncharacterized LOC642852##BC033767|LOC642852|642852|uncharacterized LOC642852##AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1	0.982556	CTCF.p2:18:0.983
chr16	75233366	75233490	reg1001284.p1	16.064	+	AK296560 TSC_hg19_v1_chr16_+_75182389 AK291372 NM_153688 AK094761 AK308134 BC064604	-50994	+	AY092767 BC047902 NM_153486 NM_194436 TSC_hg19_v1_chr16_-_75150679	-82749	-	CU690528 TSC_hg19_v1_chr16_-_75150650 BC040279	-82791	-	TSC_hg19_v1_chr16_-_75241062 AK124403 AK291822 AK225933 NM_001025200	7654	-	TSC_hg19_v1_chr16_+_75252885 NM_001906	19458	+	TSC_hg19_v1_chr16_-_75272524 AK124844	39112	-	AK296560|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK291372|ZFP1|162239|zinc finger protein 1 homolog (mouse)##NM_153688|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK094761|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK308134|ZFP1|162239|zinc finger protein 1 homolog (mouse)##BC064604|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AY092767|LDHD|197257|lactate dehydrogenase D##BC047902|LDHD|197257|lactate dehydrogenase D##NM_153486|LDHD|197257|lactate dehydrogenase D##NM_194436|LDHD|197257|lactate dehydrogenase D##BC040279|LDHD|197257|lactate dehydrogenase D##AK124403|CTRB1|1504|chymotrypsinogen B1##AK291822|CTRB2|440387|chymotrypsinogen B2##AK225933|CTRB2|440387|chymotrypsinogen B2##NM_001025200|CTRB2|440387|chymotrypsinogen B2##NM_001906|CTRB1|1504|chymotrypsinogen B1##AK124844|BCAR1|9564|breast cancer anti-estrogen resistance 1	0.999925	CTCF.p2:-22:1.000
chr11	117297050	117297178	reg1001653.p1	16.063	+	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-98283	+	TSC_hg19_v1_chr11_+_117198594 BX648682 NM_014956 BC054015	-98530	+	TSC_hg19_v1_chr11_-_117186973 AF324837 AB032975 AF201468 AF190725 BC036084 AK075049 BC065492 NM_012104 NM_138971 NM_138972 NM_138973	-110134	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	370739	-	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	370845	-	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	398320	-	AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##BX648682|CEP164|22897|centrosomal protein 164kDa##NM_014956|CEP164|22897|centrosomal protein 164kDa##BC054015|CEP164|22897|centrosomal protein 164kDa##AF324837|BACE1|23621|beta-site APP-cleaving enzyme 1##AB032975|BACE1|23621|beta-site APP-cleaving enzyme 1##AF201468|BACE1|23621|beta-site APP-cleaving enzyme 1##AF190725|BACE1|23621|beta-site APP-cleaving enzyme 1##BC036084|BACE1|23621|beta-site APP-cleaving enzyme 1##AK075049|BACE1|23621|beta-site APP-cleaving enzyme 1##BC065492|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_012104|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138971|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138972|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138973|BACE1|23621|beta-site APP-cleaving enzyme 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2	0.5835	CTCF.p2:-10:0.569
chr3	32509432	32509558	reg1001689.p1	16.063	+	TSC_hg19_v1_chr3_+_32433370 BC010116 AY174113 DQ132881 AK308878	-76092	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	-76326	+	TSC_hg19_v1_chr3_+_32280215 BC041390	-229276	+	CR457231 TSC_hg19_v1_chr3_-_32544290	34777	-	TSC_hg19_v1_chr3_-_32544335 AK000403	34838	-	BC002797 TSC_hg19_v1_chr3_-_32544365 NM_017801	34885	-	BC010116|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AY174113|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##DQ132881|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AK308878|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##CR457231|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##AK000403|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##BC002797|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##NM_017801|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6	0.886519	CTCF.p2:0:0.887
chr6	42694438	42694580	reg1001953.p1	16.061	+	M62958 M73531 NM_000322 DQ426889	-4171	-	TSC_hg19_v1_chr6_+_42531956 AY061884 CU687884	-162505	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	-162732	+	TSC_hg19_v1_chr6_-_42713800 BT007002	19287	-	TSC_hg19_v1_chr6_-_42713833 BC020170 AK312681 U61234	19319	-	TSC_hg19_v1_chr6_-_42713837 NM_003192	19366	-	M62958|PRPH2|5961|peripherin 2 (retinal degeneration, slow)##M73531|PRPH2|5961|peripherin 2 (retinal degeneration, slow)##NM_000322|PRPH2|5961|peripherin 2 (retinal degeneration, slow)##AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BT007002|TBCC|6903|tubulin folding cofactor C##BC020170|TBCC|6903|tubulin folding cofactor C##AK312681|TBCC|6903|tubulin folding cofactor C##U61234|TBCC|6903|tubulin folding cofactor C##NM_003192|TBCC|6903|tubulin folding cofactor C	0.99454	CTCF.p2:5:0.995
chr5	143204790	143204916	reg1001524.p1	16.056	+	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	-13095	+	NM_001018074 NM_001018075 NM_001018077	-389777	-	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-420687	-	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	345282	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	345323	-	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	345393	-	AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5	0.999519	CTCF.p2:21:1.000
chr2	234352302	234352426	reg1001955.p1	16.055	+	D73409 NM_003648	-55565	+	TSC_hg19_v1_chr2_+_234263153 D63479	-89152	+	TSC_hg19_v1_chr2_+_234263150 AB078966 NM_152879	-89218	+	AK001647 AJ583821 NM_018218	121852	-	TSC_hg19_v1_chr2_-_234475429 BC067300 AK295112	123053	-	AF462268 NM_019076 AK313488 AF462267 AF030310 AY435143	173957	+	D73409|DGKD|8527|diacylglycerol kinase, delta 130kDa##NM_003648|DGKD|8527|diacylglycerol kinase, delta 130kDa##D63479|DGKD|8527|diacylglycerol kinase, delta 130kDa##AB078966|DGKD|8527|diacylglycerol kinase, delta 130kDa##NM_152879|DGKD|8527|diacylglycerol kinase, delta 130kDa##AK001647|USP40|55230|ubiquitin specific peptidase 40##AJ583821|USP40|55230|ubiquitin specific peptidase 40##NM_018218|USP40|55230|ubiquitin specific peptidase 40##BC067300|USP40|55230|ubiquitin specific peptidase 40##AK295112|USP40|55230|ubiquitin specific peptidase 40##AF462268|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##NM_019076|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AK313488|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AF462267|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AF030310|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AY435143|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8	0.930557	CTCF.p2:11:0.931
chr16	761856	761956	reg1000880.p1	16.052	+	TSC_hg19_v1_chr16_-_755827 BC036680 NM_153350	-6091	-	AL136863 NM_032259 AK301146	-21504	-	TSC_hg19_v1_chr16_-_734358 BC137100 BC137101 NM_001005920	-27509	-	TSC_hg19_v1_chr16_+_765128 BC000662 NM_024042	3219	+	TSC_hg19_v1_chr16_+_771145 BC001181 NM_023933 BC002624	9257	+	AY439221 BC027941 BC031561 AK298111 AK127495 AK128575 AK303991 AK091831 AK128538 AX747208 BC042110 NM_001031737	14513	-	BC036680|FBXL16|146330|F-box and leucine-rich repeat protein 16##NM_153350|FBXL16|146330|F-box and leucine-rich repeat protein 16##AL136863|WDR24|84219|WD repeat domain 24##NM_032259|WDR24|84219|WD repeat domain 24##AK301146|WDR24|84219|WD repeat domain 24##BC137100|JMJD8|339123|jumonji domain containing 8##BC137101|JMJD8|339123|jumonji domain containing 8##NM_001005920|JMJD8|339123|jumonji domain containing 8##BC000662|METRN|79006|meteorin, glial cell differentiation regulator##NM_024042|METRN|79006|meteorin, glial cell differentiation regulator##BC001181|FAM173A|65990|family with sequence similarity 173, member A##NM_023933|FAM173A|65990|family with sequence similarity 173, member A##BC002624|FAM173A|65990|family with sequence similarity 173, member A##AY439221|CCDC78|124093|coiled-coil domain containing 78##BC027941|CCDC78|124093|coiled-coil domain containing 78##BC031561|CCDC78|124093|coiled-coil domain containing 78##AK298111|CCDC78|124093|coiled-coil domain containing 78##AK127495|CCDC78|124093|coiled-coil domain containing 78##AK128575|CCDC78|124093|coiled-coil domain containing 78##AK303991|CCDC78|124093|coiled-coil domain containing 78##AK091831|CCDC78|124093|coiled-coil domain containing 78##AK128538|CCDC78|124093|coiled-coil domain containing 78##BC042110|CCDC78|124093|coiled-coil domain containing 78##NM_001031737|CCDC78|124093|coiled-coil domain containing 78	0.996297	CTCF.p2:-9:0.996
chr20	50211647	50211772	reg1001048.p1	16.052	+	AK304147 AK226146 EU887575 EU887579 TSC_hg19_v1_chr20_-_50179379	-32325	-	EU887574 EU887577 NM_001136021	-32542	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	-52434	-	BC110591 BC110592 BC063701 TSC_hg19_v1_chr20_-_50314160	102369	-	TSC_hg19_v1_chr20_-_50384875 AB385363 AB014511 AK299064	173169	-	TSC_hg19_v1_chr20_-_50384925 NM_006045	173219	-	AK304147|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##AK226146|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887575|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887579|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC110591|ATP9A|10079|ATPase, class II, type 9A##BC110592|ATP9A|10079|ATPase, class II, type 9A##BC063701|ATP9A|10079|ATPase, class II, type 9A##AB014511|ATP9A|10079|ATPase, class II, type 9A##AK299064|ATP9A|10079|ATPase, class II, type 9A##NM_006045|ATP9A|10079|ATPase, class II, type 9A	0.230011	CTCF.p2:14:0.230
chr3	138642408	138642537	reg1001998.p1	16.051	+	AB384841 BC114432 NM_006219 S67334	-164288	-	AK001444 NM_018147	-314554	+	NM_001033030 NM_001033031 NM_001033032 TSC_hg19_v1_chr3_+_138327638 BC012478	-314856	+	BC062549 NM_023067	23509	-	AK125319 NM_001040061	23603	+	NM_001134659	82637	-	BC114432|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##NM_006219|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##S67334|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##AK001444|FAIM|55179|Fas apoptotic inhibitory molecule##NM_018147|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033030|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033031|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033032|FAIM|55179|Fas apoptotic inhibitory molecule##BC012478|FAIM|55179|Fas apoptotic inhibitory molecule##BC062549|FOXL2|668|forkhead box L2##NM_023067|FOXL2|668|forkhead box L2##AK125319|C3orf72|401089|chromosome 3 open reading frame 72##NM_001040061|C3orf72|401089|chromosome 3 open reading frame 72##NM_001134659|PRR23A|729627|proline rich 23A	0.995759	CTCF.p2:-2:0.996
chr5	133913589	133913716	reg1001743.p1	16.050	+	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	-51847	+	TSC_hg19_v1_chr5_+_133861359 AK056471 BC021962 AK292635 AK074123	-52289	+	TSC_hg19_v1_chr5_+_133842276 BC032795	-71362	+	BC002847 TSC_hg19_v1_chr5_-_133968519 AK223452 AF092130 BC093034 NM_001033503 NM_016103	54845	-	TSC_hg19_v1_chr5_+_133984493 AK304060 NM_001252231 NM_021982 BC019341	70779	+	TSC_hg19_v1_chr5_+_134074237 NM_001745 BC130325 AK313156 BC063532 U18242 AB590695 HQ258172 AF068179	160658	+	D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15##AK056471|PHF15|23338|PHD finger protein 15##BC021962|PHF15|23338|PHD finger protein 15##AK292635|PHF15|23338|PHD finger protein 15##AK074123|PHF15|23338|PHD finger protein 15##BC002847|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK223452|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AF092130|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##BC093034|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_001033503|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_016103|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001252231|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001745|CAMLG|819|calcium modulating ligand##BC130325|CAMLG|819|calcium modulating ligand##AK313156|CAMLG|819|calcium modulating ligand##BC063532|CAMLG|819|calcium modulating ligand##U18242|CAMLG|819|calcium modulating ligand##HQ258172|CAMLG|819|calcium modulating ligand##AF068179|CAMLG|819|calcium modulating ligand	0.991874	CTCF.p2:4:0.992
chr7	1105504	1105631	reg1001076.p2	16.050	+	BC014241 NM_138445 AB464540 DQ892659 DQ895899	-8423	+	TSC_hg19_v1_chr7_-_1067984 L07392 BC025971	-37610	-	TSC_hg19_v1_chr7_+_1022978 AK000366	-82598	+	NM_001039966 NM_001505 AF015257	20909	+	NM_001098201 AK289588 U63917 BC067849	22186	+	TSC_hg19_v1_chr7_-_1177884 AF495721 BC006224 NM_001134395 NM_001134396 NM_032350	72295	-	BC014241|GPR146|115330|G protein-coupled receptor 146##NM_138445|GPR146|115330|G protein-coupled receptor 146##DQ892659|GPR146|115330|G protein-coupled receptor 146##DQ895899|GPR146|115330|G protein-coupled receptor 146##BC025971|C7orf50|84310|chromosome 7 open reading frame 50##AK000366|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##NM_001039966|GPER|2852|G protein-coupled estrogen receptor 1##NM_001505|GPER|2852|G protein-coupled estrogen receptor 1##AF015257|GPER|2852|G protein-coupled estrogen receptor 1##NM_001098201|GPER|2852|G protein-coupled estrogen receptor 1##AK289588|GPER|2852|G protein-coupled estrogen receptor 1##U63917|GPER|2852|G protein-coupled estrogen receptor 1##BC067849|GPER|2852|G protein-coupled estrogen receptor 1##AF495721|C7orf50|84310|chromosome 7 open reading frame 50##BC006224|C7orf50|84310|chromosome 7 open reading frame 50##NM_001134395|C7orf50|84310|chromosome 7 open reading frame 50##NM_001134396|C7orf50|84310|chromosome 7 open reading frame 50##NM_032350|C7orf50|84310|chromosome 7 open reading frame 50	0.799416	CTCF.p2:8:0.799
chr21	19051469	19051598	reg1001823.p1	16.049	+	TSC_hg19_v1_chr21_-_18985237 NM_001130914 NM_006806	-66266	-	TSC_hg19_v1_chr21_-_18985216 AK289408	-66329	-	D64110 TSC_hg19_v1_chr21_-_18985177 BC011957	-66393	-	TSC_hg19_v1_chr21_-_19191674 AF239726 AK023825 AK225123 AK314471 CR749496 NM_001100420 NM_001100421 NM_017447	140147	-	AF523314 AF523315 NM_001204175 NM_001204176 NM_001204177 NM_001204178 AF523313	238123	+	TSC_hg19_v1_chr21_+_19617149 AF257472 NM_024944 AY358608 BC009418	565629	+	NM_001130914|BTG3|10950|BTG family, member 3##NM_006806|BTG3|10950|BTG family, member 3##AK289408|BTG3|10950|BTG family, member 3##D64110|BTG3|10950|BTG family, member 3##BC011957|BTG3|10950|BTG family, member 3##AF239726|C21orf91|54149|chromosome 21 open reading frame 91##AK023825|C21orf91|54149|chromosome 21 open reading frame 91##AK225123|C21orf91|54149|chromosome 21 open reading frame 91##AK314471|C21orf91|54149|chromosome 21 open reading frame 91##CR749496|C21orf91|54149|chromosome 21 open reading frame 91##NM_001100420|C21orf91|54149|chromosome 21 open reading frame 91##NM_001100421|C21orf91|54149|chromosome 21 open reading frame 91##NM_017447|C21orf91|54149|chromosome 21 open reading frame 91##AF523314|CHODL|140578|chondrolectin##AF523315|CHODL|140578|chondrolectin##NM_001204175|CHODL|140578|chondrolectin##NM_001204176|CHODL|140578|chondrolectin##NM_001204177|CHODL|140578|chondrolectin##NM_001204178|CHODL|140578|chondrolectin##AF523313|CHODL|140578|chondrolectin##AF257472|CHODL|140578|chondrolectin##NM_024944|CHODL|140578|chondrolectin##AY358608|CHODL|140578|chondrolectin##BC009418|CHODL|140578|chondrolectin	0.836302	CTCF.p2:-17:0.836
chr10	75700457	75700602	reg1002030.p1	16.048	+	BC049374 NM_001001791	-17995	-	AB208961 TSC_hg19_v1_chr10_+_75673428	-27142	+	BC013575 K03226 M15476 D00244 TSC_hg19_v1_chr10_+_75670948 X02760	-29588	+	TSC_hg19_v1_chr10_+_75757873 AK304823 NM_003373 NM_014000 AK300280 AK296509 BC099919 BC039174 M33308 AB385172 DQ894680	57377	+	TSC_hg19_v1_chr10_-_75910513 BC067127	209983	-	TSC_hg19_v1_chr10_-_75910561 AK315597 AK026983 AK299352 BC026232 NM_012095 NM_207012	210159	-	BC049374|C10orf55|414236|chromosome 10 open reading frame 55##NM_001001791|C10orf55|414236|chromosome 10 open reading frame 55##AB208961|PLAU|5328|plasminogen activator, urokinase##BC013575|PLAU|5328|plasminogen activator, urokinase##K03226|PLAU|5328|plasminogen activator, urokinase##M15476|PLAU|5328|plasminogen activator, urokinase##D00244|PLAU|5328|plasminogen activator, urokinase##X02760|PLAU|5328|plasminogen activator, urokinase##AK304823|VCL|7414|vinculin##NM_003373|VCL|7414|vinculin##NM_014000|VCL|7414|vinculin##AK300280|VCL|7414|vinculin##AK296509|VCL|7414|vinculin##BC039174|VCL|7414|vinculin##M33308|VCL|7414|vinculin##DQ894680|VCL|7414|vinculin##BC067127|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK315597|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK026983|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK299352|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##BC026232|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_012095|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_207012|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit	0.665999	CTCF.p2:10:0.666
chr11	69458204	69458324	reg1001395.p1	16.047	+	TSC_hg19_v1_chr11_+_69455981 AB385148 AM393193 AM393430 AM393593 DQ891848 DQ895038 CU692810 BT019844 BT019845 CR536538 CR542099	-2235	+	BC000076 BC001501 BC014078 TSC_hg19_v1_chr11_+_69455939 M73554 BC023620	-2314	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	-2354	+	TSC_hg19_v1_chr11_+_69467221 AB075505	9023	+	EF639695 BC006448 BC019024 AK054816 AK125280 TSC_hg19_v1_chr11_-_69490092	31789	-	TSC_hg19_v1_chr11_-_69490116 BC065542 AK294004 AF503940 AK311918 NM_153451 AK026600	31874	-	AM393193|CCND1|595|cyclin D1##AM393430|CCND1|595|cyclin D1##AM393593|CCND1|595|cyclin D1##DQ891848|CCND1|595|cyclin D1##DQ895038|CCND1|595|cyclin D1##BT019844|CCND1|595|cyclin D1##BT019845|CCND1|595|cyclin D1##CR536538|CCND1|595|cyclin D1##CR542099|CCND1|595|cyclin D1##BC000076|CCND1|595|cyclin D1##BC001501|CCND1|595|cyclin D1##BC014078|CCND1|595|cyclin D1##M73554|CCND1|595|cyclin D1##BC023620|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1##AB075505|CCND1|595|cyclin D1##EF639695|ORAOV1|220064|oral cancer overexpressed 1##BC006448|ORAOV1|220064|oral cancer overexpressed 1##BC019024|ORAOV1|220064|oral cancer overexpressed 1##AK125280|ORAOV1|220064|oral cancer overexpressed 1##BC065542|ORAOV1|220064|oral cancer overexpressed 1##AK294004|ORAOV1|220064|oral cancer overexpressed 1##AF503940|ORAOV1|220064|oral cancer overexpressed 1##AK311918|ORAOV1|220064|oral cancer overexpressed 1##NM_153451|ORAOV1|220064|oral cancer overexpressed 1##AK026600|ORAOV1|220064|oral cancer overexpressed 1	0.208414	CTCF.p2:16:0.208
chr10	90692534	90692658	reg1001750.p1	16.046	+	TSC_hg19_v1_chr10_+_90640003 AK056086 BC010846 NM_020799	-52618	+	AX721211 NM_144590	-80893	-	EF426484 NM_001128215	-130110	+	J05192 X13839 BC017554 TSC_hg19_v1_chr10_-_90712531 AK300353 BC093052 AK300664 AK313294 NM_001613	19948	-	NM_000043 NM_152871 NM_152872 BC012479 TSC_hg19_v1_chr10_+_90750342	57722	+	TSC_hg19_v1_chr10_+_90750599 AK290978 X63717 M67454 X83490 X83491 X83492 X83493 DQ894675 AY495076 CR450307 EU481974 FJ373045 FJ373046 FM246457 FM246458 FM246459 X89101 Z47993 Z47994 Z47995 Z66556 Z70519 Z70520	57912	+	AK056086|STAMBPL1|57559|STAM binding protein-like 1##BC010846|STAMBPL1|57559|STAM binding protein-like 1##NM_020799|STAMBPL1|57559|STAM binding protein-like 1##NM_144590|ANKRD22|118932|ankyrin repeat domain 22##EF426484|LIPM|340654|lipase, family member M##NM_001128215|LIPM|340654|lipase, family member M##J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta##X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_000043|FAS|355|Fas (TNF receptor superfamily, member 6)##NM_152871|FAS|355|Fas (TNF receptor superfamily, member 6)##NM_152872|FAS|355|Fas (TNF receptor superfamily, member 6)##BC012479|FAS|355|Fas (TNF receptor superfamily, member 6)##AK290978|FAS|355|Fas (TNF receptor superfamily, member 6)##X63717|FAS|355|Fas (TNF receptor superfamily, member 6)##M67454|FAS|355|Fas (TNF receptor superfamily, member 6)##X83490|FAS|355|Fas (TNF receptor superfamily, member 6)##X83491|FAS|355|Fas (TNF receptor superfamily, member 6)##X83492|FAS|355|Fas (TNF receptor superfamily, member 6)##X83493|FAS|355|Fas (TNF receptor superfamily, member 6)##DQ894675|FAS|355|Fas (TNF receptor superfamily, member 6)##AY495076|FAS|355|Fas (TNF receptor superfamily, member 6)##CR450307|FAS|355|Fas (TNF receptor superfamily, member 6)##EU481974|FAS|355|Fas (TNF receptor superfamily, member 6)##FJ373045|FAS|355|Fas (TNF receptor superfamily, member 6)##FJ373046|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246457|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246458|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246459|FAS|355|Fas (TNF receptor superfamily, member 6)##X89101|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47993|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47994|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47995|FAS|355|Fas (TNF receptor superfamily, member 6)##Z66556|FAS|355|Fas (TNF receptor superfamily, member 6)##Z70519|FAS|355|Fas (TNF receptor superfamily, member 6)##Z70520|FAS|355|Fas (TNF receptor superfamily, member 6)	0.311982	CTCF.p2:6:0.312
chr17	1958269	1958399	reg1001342.p4	16.045	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-13026	+	TSC_hg19_v1_chr17_+_1933446 S81752 U34880 AF321876 NM_001383 AK314015 BC096086 BC096087 BC096088 BC096089 BC003099	-24913	+	BC128608 NM_178568	-30157	-	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	64	+	DQ187313 NM_001098202	1223	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	248478	-	NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##S81752|DPH1|1801|DPH1 homolog (S. cerevisiae)##U34880|DPH1|1801|DPH1 homolog (S. cerevisiae)##AF321876|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_001383|DPH1|1801|DPH1 homolog (S. cerevisiae)##AK314015|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096086|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096087|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096088|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096089|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC003099|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC128608|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_178568|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.840921	CTCF.p2:-14:0.841
chr3	98048507	98048619	reg1001135.p2	16.044	+	NM_001005482	-46832	+	BC137523 BC137524 NM_001005479	-65456	+	NM_001005515	-161020	+	NM_001005517	24134	+	NM_001005516	60946	+	BC136918 BC136919 NM_001004736	139808	+	NM_001005482|OR5H2|79310|olfactory receptor, family 5, subfamily H, member 2##BC137523|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##BC137524|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##NM_001005479|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15##NM_001005517|OR5K4|403278|olfactory receptor, family 5, subfamily K, member 4##NM_001005516|OR5K3|403277|olfactory receptor, family 5, subfamily K, member 3##BC136918|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1##BC136919|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1##NM_001004736|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	0.935362	CTCF.p2:5:0.935
chr17	76967479	76967606	reg1001941.p1	16.043	+	TSC_hg19_v1_chr17_-_76921470 BC071586 NM_003255	-46065	-	TSC_hg19_v1_chr17_-_76921336 M32304 J05593 S48568 BC052605	-46214	-	X54533 TSC_hg19_v1_chr17_-_76921138	-46427	-	TSC_hg19_v1_chr17_-_76976006 AK307665 BC002403 BC002998 AK295442 AK301040 AK301444 X79089 AK057776 BC015761 AK293183 AK055977 L13210 NM_005567	8464	-	BC005104 TSC_hg19_v1_chr17_-_76989827	22257	-	TSC_hg19_v1_chr17_-_77005820 BC017655	38238	-	BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2##NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2##M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2##J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2##S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2##BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2##X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2##AK307665|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##BC002403|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##BC002998|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##AK295442|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##AK301040|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##AK301444|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##X79089|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##AK057776|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##BC015761|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##AK293183|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##AK055977|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##L13210|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##NM_005567|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##BC005104|CANT1|124583|calcium activated nucleotidase 1##BC017655|CANT1|124583|calcium activated nucleotidase 1	0.997713	CTCF.p2:4:0.987
chr5	167646891	167647030	reg1001596.p1	16.043	+	HE578282 HE578283 NM_001122679	-935118	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-4714317	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-4716672	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	71861	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	266514	+	TSC_hg19_v1_chr5_+_167956546 AX721195	309657	+	NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.996696	CTCF.p2:14:0.997
chr11	2058240	2058381	reg1001805.p1	16.041	+	TSC_hg19_v1_chr11_-_2019073 AK056774 AK092486 AK309887 AK311497	-39239	-	BC040073 TSC_hg19_v1_chr11_-_2019016	-39299	-	BC002550 TSC_hg19_v1_chr11_-_2018986 BC040852	-39370	-	TSC_hg19_v1_chr11_-_2152963 AF318382	94652	-	TSC_hg19_v1_chr11_-_2156727 AB528666 BT007013 CU674260 DQ892721 DQ895970	98426	-	S51971 TSC_hg19_v1_chr11_-_2158501	100194	-	AK056774|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AK092486|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC040073|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC002550|RPS12|6206|ribosomal protein S12##BC040852|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AF318382|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##BT007013|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ892721|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ895970|IGF2|3481|insulin-like growth factor 2 (somatomedin A)	0.03489	
chr1	78580193	78580314	reg1001333.p1	16.038	+	TSC_hg19_v1_chr1_+_78511749 AK225941 AB073737 AB528004 CU690284	-68491	+	BC036075 NM_017655 TSC_hg19_v1_chr1_+_78511713	-68590	+	TSC_hg19_v1_chr1_+_78470622 U40992 AK313205 AB209922 BC034721 NM_007034	-109639	+	NM_000959 NM_001039585 AK292845 AK312816 AY485530 L24470 BC112965 AF004021	376531	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	505878	+	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	535245	+	AK225941|GIPC2|54810|GIPC PDZ domain containing family, member 2##AB073737|GIPC2|54810|GIPC PDZ domain containing family, member 2##BC036075|GIPC2|54810|GIPC PDZ domain containing family, member 2##NM_017655|GIPC2|54810|GIPC PDZ domain containing family, member 2##U40992|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##AK313205|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##AB209922|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##BC034721|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##NM_007034|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##NM_000959|PTGFR|5737|prostaglandin F receptor (FP)##NM_001039585|PTGFR|5737|prostaglandin F receptor (FP)##AK292845|PTGFR|5737|prostaglandin F receptor (FP)##AK312816|PTGFR|5737|prostaglandin F receptor (FP)##AY485530|PTGFR|5737|prostaglandin F receptor (FP)##L24470|PTGFR|5737|prostaglandin F receptor (FP)##BC112965|PTGFR|5737|prostaglandin F receptor (FP)##AF004021|PTGFR|5737|prostaglandin F receptor (FP)##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44	1.932658	CTCF.p2:-25:0.959	CTCF.p2:27:0.974
chr12	54426484	54426603	reg1001322.p1	16.036	+	NM_004503 S82986 BC074844 BC074845 AB587587 CR456954	-4294	+	BC034922 BC044635 M16938 TSC_hg19_v1_chr12_+_54410917 AK314829	-15619	+	NM_014620 NM_153693 TSC_hg19_v1_chr12_+_54410671 X07495	-15866	+	NM_018953 AB463752	323	+	BC050442 NM_153633 AB464580 CU690682 EU446482	21140	+	TSC_hg19_v1_chr12_+_54519846 BC009385	93315	+	NM_004503|HOXC6|3223|homeobox C6##S82986|HOXC6|3223|homeobox C6##BC074844|HOXC6|3223|homeobox C6##BC074845|HOXC6|3223|homeobox C6##CR456954|HOXC6|3223|homeobox C6##BC034922|HOXC5|3222|homeobox C5##BC044635|HOXC5|3222|homeobox C5##M16938|HOXC6|3223|homeobox C6##AK314829|HOXC6|3223|homeobox C6##NM_014620|HOXC4|3221|homeobox C4##NM_153693|HOXC6|3223|homeobox C6##X07495|HOXC4|3221|homeobox C4##NM_018953|HOXC5|3222|homeobox C5##BC050442|HOXC4|3221|homeobox C4##NM_153633|HOXC4|3221|homeobox C4##EU446482|HOXC6|3223|homeobox C6##BC009385|LOC400043|400043|uncharacterized LOC400043	0.257475	CTCF.p2:-11:0.257
chr11	42792151	42792276	reg1001907.p1	16.034	+	AB046800 NM_020929	-2476550	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-2477619	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-6172411	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	541305	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	541351	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	541427	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.855147	CTCF.p2:-9:0.855
chr14	106441224	106441346	reg1002275.p1	16.034	+	AF064915 AF267793 DQ454464 FN563613 FN563615 FN563617 FN563618 FN563619 FN563620 FN563733 FN563734 AF460793 AY393595 DQ523938 FN563493 FN563497 FN563498 FN563499 FN563500 FN563501 FN563502 FN563503 FN563504 FN563505 FN563506 FN563508 FN563532 FN563533 FN563534 FN563535 FN563536 FN563537 FN563539 FN563541 FN563542 FN563543 FN563544 FN563545 FN563546 FN563547 FN563548 FN563549 FN563550 FN563551 FN563552 FN563553 FN563554 FN563555 FN563556 FN563557 FN563558 FN563559 FN563560 FN563561 FN563562 FN563563 FN563564 FN563565 FN563566 FN563568 FN563569 FN563570 FN563601 FN563604 FN563605 FN563606 FN563607 FN563608 FN563610 FN563638 FN563639 FN563640 FN563641 FN563642 FN563643 FN563644 FN563645 FN563646 FN563647 FN563648 FN563649 FN563650 FN563651 FN563652 FN563653 FN563654 FN563655 FN563656 FN563657 FN563658 FN563659 FN563660 FN563661 FN563674 FN563675 FN563676 FN563677 FN563678 FN563679 FN563680 FN563681 FN563682 FN563683 FN563684 FN563685 FN563686 FN563687 FN563688 FN563689 FN563690 FN563691 FN563692 FN563693 FN563694 FN563695 FN563696 FN563697 FN563698 FN563727 FN563728 FN563729 FN563730 FN563731 FN563732 FN563741 FN563742 FN563743 FN563744 FN563745 FN563746 FN563747 FN563748 FN563749 FN563750 FN563751 FN563752 DQ454919 DQ454917 DQ454897 M71234 DQ454581 DQ454690 DQ454896 DQ454978 DQ454888 DQ454959 DQ454895 AF017457 M71225 M71226 DQ523915 L04771 AJ008198 AJ008199 DQ454824 S75894 EU099248 EF407841 JF810281 L21746 AF459631 S76902 AF343422 AF343424 M99372 L21747 DQ454899 AY393584 AY393323 AY393326 AY393327 AY393332 AY393473 AY393474 AY393476 AY393477 AY393479 AY393484 AY393486 AY393487 AY393488 AY393489 AY393490 AY393492 AY393574 AY393575 AY393576 AY393577 AY393578 AY393579 AY393580 AY393581 AY393582 AY393583 AY393585 AY393586 AY393587 AY393588 AY393589 AY393590 AY393591 AY393592 AY393593 AY393594 EU099263 L21734 X65920 DQ524023 AF103096 AF035040 DQ523994 L21733 L21738 L21729 AF015136 AF015137 AF015139 AF015140 AF015141 AF015144 AF015145 AF015146 JN110879 JN110884 JN110895 JN110931 L04333 L04338 L04341 L04762 L04763 L04768 L04769 L04770 L04772 L21726 L21727 L21730 L21731 L21732 L21735 L21736 L21737 L21739 L21740 L21741 L21742 L21744 L21745 L21748 M71217 M71219 M71223 M71227 M71228 M71229 M71230 M71233 U13195 U13196 U13197 U13198 U13199 U13200 U13201 U13202 FJ385406 AF082200 AF103769 AF361061 AF361062 AF361063 AF361064 AF361065 AF361066 AF361067 AF361068 AF361069 AF361070 AF361071 AF361072 U21271 DQ524163 AF166264 L38894 U21250 U21251 U21263 U21264 U21265 AJ239381 AJ007440 DQ523936 DQ523948 DQ523949 DQ523956 DQ523961 DQ523963 DQ523978 DQ523981 DQ523982 DQ523983 DQ523996 DQ523998 DQ524010 DQ524016 DQ524025 DQ524056 DQ524063 DQ524064 DQ524066 DQ524067 DQ524069 DQ524071 DQ524073 DQ524075 DQ524076 DQ524078 DQ524081 DQ524082 DQ524083 DQ524084 DQ524085 DQ524086 DQ524091 DQ524093 DQ524094 DQ524095 DQ524097 DQ524098 DQ524101 DQ524103 DQ524105 DQ524106 DQ524107 DQ524109 DQ524112 DQ524113 DQ524116 DQ524119 DQ524121 DQ524122 DQ524123 DQ524128 DQ524129 DQ524139 DQ524145 DQ524156 DQ524157 DQ926041 HM996448 AF129749 U00535 AB063677 AB063678 AB063679 AB063680 AB063686 AB063687 AB063697 AB063724 AB063750 AB063809 AB063891 AB063907 AB063912 AB063922 AB066943 AB066951 AB066952 AB067336 AB067338 AB067339 AB067340 AB067341 AB067342 AB067343 AB067344 AB067347 AB067349 AB067351 AB067353 AB067355 AB067357 AB067358 AB067361 AB067363 AB067364 AB067365 AB067366 AB067368 AB067369 AB067370 AB067373 AB067374 AB067376 AF013615 AF021985 AF035039 AF062123 AF062213 AF062284 AF078942 AF110149 AF174044 AJ308465 AM279625 AM279626 AM279627 AY033244 AY033245 AY033248 AY033249 AY033259 AY033260 AY033261 AY033269 AY033277 AY033278 AY270187 AY270188 AY270189 AY685266 AY941880 AY941881 AY941882 AY941890 AY941918 AY941924 AY941925 AY971140 DQ005277 DQ005294 DQ100886 DQ100891 DQ100997 DQ205179 DQ212525 DQ212526 DQ535278 DQ535313 DQ535323 DQ926075 DQ926092 DQ926147 DQ926280 DQ926430 DQ926455 DQ926581 DQ926593 EF178076 FJ385286 FJ490201 HQ378327 S71250 U00548 U00558 X67879 X67880 X67881 X67882 X67883 X67884 X67885 X67886 X67887 X67888 X67889 X67890 X67891 X67892 X67893 X67894 X67895 X67896 X67897 X67898 X67900 Z15110 M18510 Z14210 Z14207 Z14209 AY392985 AY392987 AY392988 AY392989 AY392990 AY392991 AY392992 AY392993 AY392994 AY392995 AY392997 AY392998 AY393098 AY393099 AY393100 AY393101 AY393102 AY393103 AY393104 AY393205 AY393206 AY393207 AY393208 AF062114 AF062137 AF062165 AF062219 AF062254 AF062273 AY452136 AY452137 L21957 X65916 X65917 X65918 Z14158 Z14159 Z14160 Z14161 Z14162 Z14163 Z14164 Z14184 Z14185 Z14186 Z14187 Z14188 Z14208 Z14211 Z14223 Z47236 BC089412 AY510105 M34029 BX648616 TSC_hg19_v1_chr14_-_106406109	-35414	-	TSC_hg19_v1_chr14_-_106321626 FJ197674	-119604	-	BX248278 TSC_hg19_v1_chr14_-_106237682 AJ294732	-203581	-	U32200 U32268 U32334 U32335 U32336 U32488 U32490 U32599 U32608 U32609 U32947 U32948 U32950 U32963 U33799 U33801 AF028098 AF028106 AF028107 AF028114 AF028118 AY155550 AY155551 DQ454559 AF460797 AF460726 AF460724 AF460827 DQ454629 DQ454614 DQ454962 GQ232822 DQ454705 DQ523871 DQ454580 DQ523917 DQ523919 AY003767 DQ454466 DQ454560 DQ454565 DQ454682 EU099268 GU552685 AY003808 AY003836 DQ454469 DQ454795 DQ454971 DQ454985 DQ454452 DQ454571 DQ454944 DQ454960 DQ523896 EF583670 DQ454558 DQ454677 DQ454859 DQ454868 DQ455000 DQ523852 DQ523901 DQ454442 DQ523848 HQ704012 DQ100720 DQ454840 DQ454949 FJ840328 FJ873931 HM116191 GQ232887 AJ487491 AJ487492 AJ487493 AJ487498 AJ487506 AY003837 JF810257 AF069907 EF091912 EF175411 EF175427 EF583661 EU350413 EU433868 EU433869 EU433881 EU667601 EU667602 FJ694875 GQ232782 GQ232813 GQ232814 GQ232841 GQ232875 GQ232936 GQ232966 GQ232996 JF810256 GQ232768 EF441747 EF583659 AF103205 AF103114 EF566909 U86787 AF484410 HQ392886 JF894284 AM279467 AM279468 AM279469 AM279470 AM279471 AM279552 AM279555 AM279588 AM279641 AF308558 EU099276 GQ232957 AF408722 HM774202 EU099163 HM774025 HM774888 HM775065 JN110525 JN110528 JN111117 L04330 L04332 L04340 FJ385388 FJ385429 GQ504861 HM774080 HM774150 HM774407 HM774529 HM774561 HM774885 HQ704005 HQ704037 S73138 AF103263 AF082193 AJ008249 AY099261 AY206987 AY998750 DQ097896 EU099144 EU099173 EU099285 AF402947 X94432 AM183993 AY393351 EU099152 EU099269 EU099281 AF306372 AJ236544 AJ271548 AY193806 AY376076 AY376077 AY376090 AY393002 AY393003 AY393011 AY393020 AY393107 AY393113 AY393114 AY393116 AY393122 AY393139 AY393140 AY393227 AY393228 AY393241 AY393250 AY393254 AY393257 AY393259 AY393354 AY393357 AY393363 AY393377 AY393497 AY393500 AY393506 AY393509 AY393511 AY393533 AY393613 AY393616 AY393617 AY393633 AY393637 AY393653 AY393671 AY393676 EU099082 EU099119 EU099146 JF894280 HM995126 JN159306 HM995172 HM995197 HM995672 AY941929 DQ100708 DQ100722 DQ523939 DQ523940 DQ524004 DQ524046 DQ524048 DQ524070 DQ524135 HM994894 HM995065 HM995066 HM995070 HM995071 HM995072 HM995073 HM995088 HM995175 HM995192 HM995193 HM995194 HM995195 HM995196 HM995198 HM995281 HM995297 HM995349 HM995351 HM995538 HM995541 HM995542 HM995586 HM995587 HM995589 HM995591 HM995593 HM995610 HM995612 HM995613 HM996403 HM996541 AY971055 DQ926099 AB063667 AB063719 AB063917 AB066970 AB066981 AB067004 AB067009 AB067029 AB067072 AB067119 AB067126 AB067131 AB067253 AB363079 AB363093 AB363142 AB363149 AB363155 AF035019 AF035020 AF209860 AJ239337 AJ308447 AY033279 AY033280 AY376105 AY866614 AY941843 AY941858 AY941885 AY941903 AY941937 AY944702 AY944720 DQ065631 DQ065643 DQ065667 DQ065682 DQ065683 DQ065690 DQ065691 DQ926090 DQ926220 DQ926223 DQ926495 DQ926527 EF178106 EU549725 EU549730 FJ385284 FJ385396 HQ378330 JF894278 JF894282 JF894286 U07988 AB063662 AB063801 AB063829 AB063919 AB066925 AB066926 AB066963 AB067152 AB067166 AB067301 AB067307 AB067308 AB067329 AB067390 AB067393 AB363083 AB363143 AB363151 AB363161 AF006523 AF021941 AF021969 AF022007 AF035786 AF062092 AF062194 AF062195 AF062197 AF115113 AF115129 AF174043 AF174084 AF174094 AF174099 AF174107 AF174114 AF174125 AF174127 AF302820 AF455545 AF455547 AJ239344 AJ239371 AJ308466 AJ389196 AJ414005 AJ414014 AJ617573 AY033238 AY055487 AY345921 AY553642 AY553645 AY577308 AY577310 AY640563 AY866611 AY941911 AY941936 AY941945 AY971057 AY971071 DQ100662 DQ100680 DQ100786 DQ100789 DQ100800 DQ100816 DQ100914 DQ100919 DQ225091 DQ926031 DQ926058 DQ926059 DQ926135 DQ926486 DQ926543 FJ385320 FJ385387 GU570212 GU570215 GU570217 GU570269 HQ689739 JF806453 JF806454 JN158766 JN158852 JN159083 JN159282 JN159291 JN159293 JN159302 JN159305 JN159446 L14456 L23558 S73506 U00499 U00505 U00539 U00554 U00562 U00568 U00586 U71104 U85231 U85241 U86522 Z18846 Z34893 Z92888 AF035803 AY686906 AY686915 AY944693 AY944713 AY944721 DQ535285 DQ535302 DQ535348 DQ535375 DQ535476 EF177970 EF178023 EF178112 EF178115 EF178119 EF178135 HM995869 HM995871 AY957509 AY957510 FJ039793 AF062143 AF062151 AF062178 AF062179 AF062226 AF062256 AF062257 AF062262 AF062267 AF062271 AF067121 AF174005 AF174006 AF174009 AF174016 AF174031 AJ009732 M29468 U43758 U43762 Z14213 Z36889 Z46348 Z47223 Z80852 L23559 M24668 AJ010445 TSC_hg19_v1_chr14_-_106453155 BC080557 M18512	11640	-	TSC_hg19_v1_chr14_-_106453169 X17117 AK129517 AK130825 BC065733 X59702	11885	-	GQ232825 GU552779 GU552687 GU552689 AY003848 FJ873924 FJ873955 GQ232946 HM116167 EF407847 EU350414 GQ232973 HM774711 EF407839 EF441752 U86801 AF211930 AM279559 HM774196 EU099286 EU146322 L04328 L04336 L04337 L33037 AY062319 FJ385375 FJ385408 FJ385414 FJ385418 FJ385419 HM774332 HM774418 HM774599 HM774606 AF103282 EU099067 EU099203 EU099287 EU146373 EU146380 FJ385394 EU099221 EU099283 AF306375 AF306376 AM259139 AY062320 AY392849 AY393007 AY393013 AY393111 AY393223 AY393232 AY393255 AY393368 AY393531 AY393610 AY393666 DQ100814 EU099253 HM996275 AY033262 AY033283 EF177964 FJ385299 AB022655 AB067168 AB067394 AF022000 AJ239360 AJ414006 AY553644 AY553647 AY885171 DQ926345 FJ039788 HM152522 M17750 M17751 U00569 U00580 AY686877 AY944696 DQ535282 DQ535443 DQ535465 DQ535484 EF178053 EF178130 FJ195468 FJ195471 HM152519 AF062134 AF062139 AF062140 AF062142 AF062221 L01278 X65883 X65885 X65887 X65888 X65891 X65892 X65893 Z47274 Z47275 Z47276 Z47277 Z80847 BC075840 TSC_hg19_v1_chr14_-_106471733 BX640724 AK097348 AK126543 AK304469 BX640847 S42403	30372	-	BC089412|IGHM|3507|immunoglobulin heavy constant mu##BX248278|IGHM|3507|immunoglobulin heavy constant mu##BC080557|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129517|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC075840|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640724|IGHM|3507|immunoglobulin heavy constant mu##AK097348|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK126543|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640847|IGHA1|3493|immunoglobulin heavy constant alpha 1	1.033677	CTCF.p2:-82:0.998
chr2	118819080	118819224	reg1002088.p1	16.034	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-47419	-	TSC_hg19_v1_chr2_-_118771677 BC028609	-47468	-	AM393188 AM393503 AM393699 AB384355 AK057926 TSC_hg19_v1_chr2_-_118771647 BC093018 AK290722 AK309040 BC012052 AB209993	-47538	-	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	26911	+	NM_001426	786606	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	880668	+	NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC028609|CCDC93|54520|coiled-coil domain containing 93##AM393188|CCDC93|54520|coiled-coil domain containing 93##AM393503|CCDC93|54520|coiled-coil domain containing 93##AM393699|CCDC93|54520|coiled-coil domain containing 93##AK057926|CCDC93|54520|coiled-coil domain containing 93##BC093018|CCDC93|54520|coiled-coil domain containing 93##AK290722|CCDC93|54520|coiled-coil domain containing 93##AK309040|CCDC93|54520|coiled-coil domain containing 93##BC012052|CCDC93|54520|coiled-coil domain containing 93##AB209993|CCDC93|54520|coiled-coil domain containing 93##AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_001426|EN1|2019|engrailed homeobox 1##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure	0.934608	CTCF.p2:22:0.935
chr7	101922880	101923026	reg1001528.p1	16.031	+	M74099 NM_181552	-462072	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-463744	+	BC002778 NM_138403	-650378	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	5444	+	TSC_hg19_v1_chr7_+_101928431 AB000520	5490	+	NM_001146210	73935	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.999947	CTCF.p2:-21:1.000
chr16	21719963	21720100	reg1002000.p1	16.029	+	AK093062 AX747895 NM_170664 BC040551 AK302733	-3714	+	AK125840 NM_001161683	-24282	+	BC129993 NM_144672 BC129992	-30196	+	BC009198 BC068999 TSC_hg19_v1_chr16_-_21831777 BC070157	111729	-	AK316459 AK296301 AK303500 AK301703 AK294452 TSC_hg19_v1_chr16_-_21854901	134797	-	NM_003366 AK307535 TSC_hg19_v1_chr16_+_21964618	244597	+	AK093062|OTOA|146183|otoancorin##NM_170664|OTOA|146183|otoancorin##BC040551|OTOA|146183|otoancorin##AK302733|OTOA|146183|otoancorin##AK125840|OTOA|146183|otoancorin##NM_001161683|OTOA|146183|otoancorin##BC129993|OTOA|146183|otoancorin##NM_144672|OTOA|146183|otoancorin##BC129992|OTOA|146183|otoancorin##BC009198|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC068999|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC070157|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##AK316459|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296301|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AK303500|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK301703|LOC613037|613037|nuclear pore complex interacting protein pseudogene##AK294452|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_003366|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##AK307535|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II	0.991737	CTCF.p2:-2:0.992
chr17	46095805	46095930	reg1001594.p1	16.029	+	AF343090 TSC_hg19_v1_chr17_+_46048487 AF110322 AK225274 BC072435 AB062433 BC009957	-47373	+	TSC_hg19_v1_chr17_+_46048471 AF217982 AK023722	-47398	+	AK223387 NM_176096 TSC_hg19_v1_chr17_+_46048452	-47435	+	TSC_hg19_v1_chr17_-_46115160 AB590254 DQ893053 DQ896301 AB047849 BC015924 AB037938 NM_016429	19283	-	TSC_hg19_v1_chr17_+_46125712 NM_003204 BC010623 AK090459	29832	+	AL833530 TSC_hg19_v1_chr17_+_46125724	29857	+	AF343090|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF110322|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK225274|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC072435|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AB062433|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC009957|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF217982|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK023722|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK223387|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##NM_176096|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##DQ893053|COPZ2|51226|coatomer protein complex, subunit zeta 2##DQ896301|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB047849|COPZ2|51226|coatomer protein complex, subunit zeta 2##BC015924|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB037938|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_016429|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	1.910989	CTCF.p2:30:0.949	CTCF.p2:72:0.962
chr22	21754273	21754379	reg1001080.p1	16.029	+	NM_001128635	-16287	+	NM_001128633	-16664	+	BC062565 AJ000730 BC008814 NM_004173 TSC_hg19_v1_chr22_-_21386851	-367475	-	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	17350	+	NM_001207052	67132	+	NM_001128635	151046	-	NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##BC062565|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AJ000730|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC008814|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_004173|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2##NM_001207052|TMEM191C|645426|transmembrane protein 191C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B	0.997382	CTCF.p2:-1:0.997
chr6	24992214	24992349	reg1001844.p1	16.027	+	TSC_hg19_v1_chr6_-_24936189 AK299047	-56098	-	AB002384 NM_014722	-81087	-	U49187 AK300138 BC001232 NM_015864	-114764	-	TSC_hg19_v1_chr6_+_25279316 BC040903	287037	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	287377	+	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	287613	+	AK299047|FAM65B|9750|family with sequence similarity 65, member B##AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A	0.172349	
chr6	35417310	35417412	reg1001362.p1	16.027	+	TSC_hg19_v1_chr6_+_35310402 AK304482 L07592	-106952	+	TSC_hg19_v1_chr6_+_35310375 AK304878 AB099507 AK296425 AK291661 BC002715 BC007578	-106985	+	TSC_hg19_v1_chr6_+_35310339 AK122614	-107022	+	TSC_hg19_v1_chr6_+_35420129 AK292522 BC046359 AF265210 NM_021922	2767	+	AK312617 TSC_hg19_v1_chr6_+_35420152	2794	+	NM_007104 TSC_hg19_v1_chr6_+_35436179 AK313181 AB055764 BC070216	18822	+	AK304482|PPARD|5467|peroxisome proliferator-activated receptor delta##L07592|PPARD|5467|peroxisome proliferator-activated receptor delta##AK304878|PPARD|5467|peroxisome proliferator-activated receptor delta##AB099507|PPARD|5467|peroxisome proliferator-activated receptor delta##AK296425|PPARD|5467|peroxisome proliferator-activated receptor delta##AK291661|PPARD|5467|peroxisome proliferator-activated receptor delta##BC002715|PPARD|5467|peroxisome proliferator-activated receptor delta##BC007578|PPARD|5467|peroxisome proliferator-activated receptor delta##AK122614|PPARD|5467|peroxisome proliferator-activated receptor delta##AK292522|FANCE|2178|Fanconi anemia, complementation group E##BC046359|FANCE|2178|Fanconi anemia, complementation group E##AF265210|FANCE|2178|Fanconi anemia, complementation group E##NM_021922|FANCE|2178|Fanconi anemia, complementation group E##AK312617|FANCE|2178|Fanconi anemia, complementation group E##NM_007104|RPL10A|4736|ribosomal protein L10a##AK313181|RPL10A|4736|ribosomal protein L10a##BC070216|RPL10A|4736|ribosomal protein L10a	0.99947	CTCF.p2:7:0.999
chr19	39125368	39125497	reg1001881.p1	16.024	+	TSC_hg19_v1_chr19_+_39109863 BC001031 AK026531 AF315506 CU674510	-15555	+	AF109355 TSC_hg19_v1_chr19_+_39109847	-15585	+	TSC_hg19_v1_chr19_+_39109833 AK316344 AK301035 AK289554	-15594	+	TSC_hg19_v1_chr19_+_39138266 NM_004924	12834	+	AK309363 TSC_hg19_v1_chr19_+_39138288	12857	+	TSC_hg19_v1_chr19_+_39138308 U48734	12877	+	BC001031|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK026531|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF315506|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF109355|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK316344|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK301035|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK289554|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##NM_004924|ACTN4|81|actinin, alpha 4##AK309363|ACTN4|81|actinin, alpha 4##U48734|ACTN4|81|actinin, alpha 4	1.451098	CTCF.p2:2:0.839	CTCF.p2:80:0.612
chr3	196411867	196412008	reg1002024.p1	16.022	+	BC044233 NM_198565 TSC_hg19_v1_chr3_+_196366658 AY358322	-45275	+	TSC_hg19_v1_chr3_+_196366647 BC034704	-45292	+	TSC_hg19_v1_chr3_+_196295733 NM_001105573	-116205	+	AK058155 TSC_hg19_v1_chr3_-_196439156 BC007827 AY099509 NM_032898 AK314070	27179	-	TSC_hg19_v1_chr3_+_196439214 NM_001166304 NM_017861 AK000529 BC022542	27322	+	TSC_hg19_v1_chr3_+_196466727 NM_002577	54788	+	BC044233|LRRC33|375387|leucine rich repeat containing 33##NM_198565|LRRC33|375387|leucine rich repeat containing 33##AY358322|LRRC33|375387|leucine rich repeat containing 33##BC034704|LRRC33|375387|leucine rich repeat containing 33##NM_001105573|FBXO45|200933|F-box protein 45##AK058155|CEP19|84984|centrosomal protein 19kDa##BC007827|CEP19|84984|centrosomal protein 19kDa##AY099509|CEP19|84984|centrosomal protein 19kDa##NM_032898|CEP19|84984|centrosomal protein 19kDa##AK314070|CEP19|84984|centrosomal protein 19kDa##NM_001166304|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##NM_017861|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##AK000529|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##BC022542|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##NM_002577|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2	0.999668	CTCF.p2:0:1.000
chr5	95182810	95182935	reg1001411.p1	16.022	+	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	-24352	-	AF162769 BT006689 CR450312 CR542165 DQ892497 DQ895709 CU679866 D21238 AF069668 BC106075 X76648 TSC_hg19_v1_chr5_-_95158431 AK311868 BC005304 BC010965	-24472	-	TSC_hg19_v1_chr5_+_95067531 CU691986 AB385392	-115336	+	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	114626	-	TSC_hg19_v1_chr5_-_95297609 BC028412 NM_012081	114813	-	AK308575 NM_001177876	565816	-	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##AF162769|GLRX|2745|glutaredoxin (thioltransferase)##BT006689|GLRX|2745|glutaredoxin (thioltransferase)##CR450312|GLRX|2745|glutaredoxin (thioltransferase)##CR542165|GLRX|2745|glutaredoxin (thioltransferase)##DQ892497|GLRX|2745|glutaredoxin (thioltransferase)##DQ895709|GLRX|2745|glutaredoxin (thioltransferase)##D21238|GLRX|2745|glutaredoxin (thioltransferase)##AF069668|GLRX|2745|glutaredoxin (thioltransferase)##BC106075|GLRX|2745|glutaredoxin (thioltransferase)##X76648|GLRX|2745|glutaredoxin (thioltransferase)##AK311868|GLRX|2745|glutaredoxin (thioltransferase)##BC005304|GLRX|2745|glutaredoxin (thioltransferase)##BC010965|GLRX|2745|glutaredoxin (thioltransferase)##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2##BC028412|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_012081|ELL2|22936|elongation factor, RNA polymerase II, 2##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1	0.99198	CTCF.p2:13:0.992
chr13	100568878	100568999	reg1001214.p2	16.020	+	TSC_hg19_v1_chr13_+_100258943 NM_206808 AK300510 BC034360 AK095506 AF428253 CU689862	-310018	+	BC041830 TSC_hg19_v1_chr13_+_100229390	-339561	+	TSC_hg19_v1_chr13_+_100153777 BC130293	-415156	+	AF378304 NM_033132	55231	-	TSC_hg19_v1_chr13_+_100633453 AK298232	64517	+	TSC_hg19_v1_chr13_+_100634037 NM_007129	65082	+	NM_206808|CLYBL|171425|citrate lyase beta like##AK300510|CLYBL|171425|citrate lyase beta like##BC034360|CLYBL|171425|citrate lyase beta like##AK095506|CLYBL|171425|citrate lyase beta like##AF428253|CLYBL|171425|citrate lyase beta like##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2##AF378304|ZIC5|85416|Zic family member 5##NM_033132|ZIC5|85416|Zic family member 5##NM_007129|ZIC2|7546|Zic family member 2	1.931536	CTCF.p2:-20:0.981	CTCF.p2:28:0.950
chr12	65091902	65092048	reg1001470.p1	16.018	+	TSC_hg19_v1_chr12_+_65004274 AY217662 AY217663 BC100949 BC100950 BC100951 BC100952 NM_178169	-87714	+	NM_013254 TSC_hg19_v1_chr12_+_64845917 AK291039 BC034950 AF191838	-246082	+	BC020569 Y16414 TSC_hg19_v1_chr12_+_64803772 AF039022	-288197	+	CU680338 Z12173 TSC_hg19_v1_chr12_-_65153140	61122	-	TSC_hg19_v1_chr12_-_65153163 AK308454 AK291771	61184	-	AK223484 AK302443 TSC_hg19_v1_chr12_-_65153187 AK296759 AK300350 AK304158 AK308094 BC012482	61209	-	AY217662|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##AY217663|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100949|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100950|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100951|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100952|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##NM_178169|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##NM_013254|TBK1|29110|TANK-binding kinase 1##AK291039|TBK1|29110|TANK-binding kinase 1##BC034950|TBK1|29110|TANK-binding kinase 1##AF191838|TBK1|29110|TANK-binding kinase 1##BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Z12173|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK308454|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK291771|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK223484|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK302443|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK296759|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK300350|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK304158|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK308094|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##BC012482|GNS|2799|glucosamine (N-acetyl)-6-sulfatase	1.355088	CTCF.p2:19:0.959	CTCF.p2:54:0.228
chr2	87456371	87456509	reg1002135.p1	16.018	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	-153108	-	BC107767 BC109248 BC070296 BC005379 NM_001032392 M93143 NM_002665 BC022294	-207482	-	CR749330 NM_001024457	-311703	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	298577	+	TSC_hg19_v1_chr2_+_87755060 AK312010	298620	+	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	591179	+	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC107767|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC022294|PLGLB2|5342|plasminogen-like B2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1	0.999571	CTCF.p2:-13:1.000
chr22	50431940	50432045	reg1001474.p1	16.014	+	TSC_hg19_v1_chr22_+_50354433 AK292005 BC141855 BC052239 AB528933 BC140030	-77481	+	TSC_hg19_v1_chr22_+_50354140 NM_001001852 AB114795	-77843	+	TSC_hg19_v1_chr22_+_50312337 BC050675 DQ470678 AK225930 AY358355 BC002894 DQ470676 DQ470677 DQ470680 AJ968414	-119617	+	NM_001001694 AK123987	19078	-	TSC_hg19_v1_chr22_-_50523682 AK294048	91700	-	BC028425 BC070042 TSC_hg19_v1_chr22_-_50523742	91747	-	AK292005|PIM3|415116|pim-3 oncogene##BC141855|PIM3|415116|pim-3 oncogene##BC052239|PIM3|415116|pim-3 oncogene##BC140030|PIM3|415116|pim-3 oncogene##NM_001001852|PIM3|415116|pim-3 oncogene##AB114795|PIM3|415116|pim-3 oncogene##BC050675|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470678|CRELD2|79174|cysteine-rich with EGF-like domains 2##AK225930|CRELD2|79174|cysteine-rich with EGF-like domains 2##AY358355|CRELD2|79174|cysteine-rich with EGF-like domains 2##BC002894|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470676|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470677|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470680|CRELD2|79174|cysteine-rich with EGF-like domains 2##AJ968414|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_001001694|IL17REL|400935|interleukin 17 receptor E-like##AK123987|IL17REL|400935|interleukin 17 receptor E-like##AK294048|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1##BC028425|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1##BC070042|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	0.974943	CTCF.p2:-13:0.289	CTCF.p2:-14:0.686
chr6	36091743	36091842	reg1000942.p2	16.014	+	TSC_hg19_v1_chr6_+_35995587 BC000092 BC031574 L35264	-96136	+	AK303414 TSC_hg19_v1_chr6_+_35995584	-96209	+	TSC_hg19_v1_chr6_+_35995536 AK291709 L35263	-96247	+	NM_002754 TSC_hg19_v1_chr6_+_36098292 AK308018 BC085196 AF004709 BC000433 BC001641 BC004428 Y10488 AF092535 U93232 AF100546 AB451221 AB451344 AB463892 BT007221 CR536490 CR541687 DQ891372 DQ894551 EU832156 EU832250 AK222922	6522	+	TSC_hg19_v1_chr6_+_36164569 AB033112 NM_015695	72768	+	TSC_hg19_v1_chr6_-_36164979 BC042825	73192	-	BC000092|MAPK14|1432|mitogen-activated protein kinase 14##BC031574|MAPK14|1432|mitogen-activated protein kinase 14##L35264|MAPK14|1432|mitogen-activated protein kinase 14##AK303414|MAPK14|1432|mitogen-activated protein kinase 14##AK291709|MAPK14|1432|mitogen-activated protein kinase 14##L35263|MAPK14|1432|mitogen-activated protein kinase 14##NM_002754|MAPK13|5603|mitogen-activated protein kinase 13##AK308018|MAPK13|5603|mitogen-activated protein kinase 13##BC085196|MAPK13|5603|mitogen-activated protein kinase 13##AF004709|MAPK13|5603|mitogen-activated protein kinase 13##BC000433|MAPK13|5603|mitogen-activated protein kinase 13##BC001641|MAPK13|5603|mitogen-activated protein kinase 13##BC004428|MAPK13|5603|mitogen-activated protein kinase 13##Y10488|MAPK13|5603|mitogen-activated protein kinase 13##AF092535|MAPK13|5603|mitogen-activated protein kinase 13##U93232|MAPK13|5603|mitogen-activated protein kinase 13##AF100546|MAPK13|5603|mitogen-activated protein kinase 13##AB451221|MAPK13|5603|mitogen-activated protein kinase 13##AB451344|MAPK13|5603|mitogen-activated protein kinase 13##BT007221|MAPK13|5603|mitogen-activated protein kinase 13##CR536490|MAPK13|5603|mitogen-activated protein kinase 13##CR541687|MAPK13|5603|mitogen-activated protein kinase 13##DQ891372|MAPK13|5603|mitogen-activated protein kinase 13##DQ894551|MAPK13|5603|mitogen-activated protein kinase 13##EU832156|MAPK13|5603|mitogen-activated protein kinase 13##EU832250|MAPK13|5603|mitogen-activated protein kinase 13##AK222922|MAPK13|5603|mitogen-activated protein kinase 13##AB033112|BRPF3|27154|bromodomain and PHD finger containing, 3##NM_015695|BRPF3|27154|bromodomain and PHD finger containing, 3	0.996373	CTCF.p2:-2:0.996
chr6	51824681	51824803	reg1001768.p1	16.013	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-1038207	+	AY028376 NM_172238	-1143486	+	DQ012016 NM_001037498	-1808379	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	127653	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	226464	+	AF384857 JF305974 AB590713 BC070124 NM_052872	284519	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.994901	CTCF.p2:11:0.995
chr22	43429975	43430104	reg1001690.p1	16.011	+	TSC_hg19_v1_chr22_-_43411156 NM_001184970	-18862	-	TSC_hg19_v1_chr22_-_43411136 AF128536	-18900	-	AL136845 NM_001184971	-74153	-	TSC_hg19_v1_chr22_-_43485410 AF104927 AF173935 AK315658 BC009058 AK095996 BC014968 AL136687 NM_012263	55348	-	NM_001197 TSC_hg19_v1_chr22_+_43506755 BC001599 U49730 U34584	76733	+	TSC_hg19_v1_chr22_-_43539355 BC030985 AL359401 AL359403 AK314059	109313	-	NM_001184970|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF104927|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AF173935|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK315658|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC009058|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK095996|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC014968|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AL136687|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_012263|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_001197|BIK|638|BCL2-interacting killer (apoptosis-inducing)##BC001599|BIK|638|BCL2-interacting killer (apoptosis-inducing)##U49730|BIK|638|BCL2-interacting killer (apoptosis-inducing)##U34584|BIK|638|BCL2-interacting killer (apoptosis-inducing)##BC030985|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AL359401|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AL359403|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AK314059|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)	0.111346	
chr6	112318440	112318574	reg1001770.p1	16.010	+	TSC_hg19_v1_chr6_-_112194648 NM_002037	-123852	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	-123972	-	BC032496 NM_153048	-238199	-	BC012028 NM_003880 BC035250 NM_198239 BC105940 BC105941 AY358349 AF100781 AY358350 AB075040	56910	+	AF201334 CU689114 CU692994 DQ891503 DQ894695 BC025405 TSC_hg19_v1_chr6_-_112408705 BC031101 AK026242 NM_016262	90198	-	NM_001033564 TSC_hg19_v1_chr6_+_112408818 BC044912 AL049461	90274	+	NM_002037|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3##AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF201334|TUBE1|51175|tubulin, epsilon 1##DQ891503|TUBE1|51175|tubulin, epsilon 1##DQ894695|TUBE1|51175|tubulin, epsilon 1##BC025405|TUBE1|51175|tubulin, epsilon 1##BC031101|TUBE1|51175|tubulin, epsilon 1##AK026242|TUBE1|51175|tubulin, epsilon 1##NM_016262|TUBE1|51175|tubulin, epsilon 1##NM_001033564|C6orf225|619208|chromosome 6 open reading frame 225##BC044912|C6orf225|619208|chromosome 6 open reading frame 225##AL049461|C6orf225|619208|chromosome 6 open reading frame 225	0.023746	
chr7	6362718	6362848	reg1001930.p1	16.010	+	AB528964 DQ891736 DQ894912 EU176610 AJ223957 TSC_hg19_v1_chr7_-_6312242 AJ005197 NM_004227 AK313728 BC028717	-50552	-	TSC_hg19_v1_chr7_+_6144605 AK022759 AY618868 BC060846 AK309375	-218185	+	TSC_hg19_v1_chr7_+_6144564 NM_032172 AK298164	-218240	+	TSC_hg19_v1_chr7_-_6388581 AK311878 AF533707 BC006110 NM_001037163 BC142977	25727	-	TSC_hg19_v1_chr7_+_6414179 NM_006908 NM_018890 AK054993 BC107748 AK291806 AB209410 BC050687 AK291815 AY279384 BC004247 AB451238 AB451363 AB464133 AF136373 AF498964 AJ132694 BT007121 CU690768 EU831965 EU832058 EU832640 EU832717 M29870 M31467	51444	+	TSC_hg19_v1_chr7_-_6474593 AK298910	111807	-	DQ891736|CYTH3|9265|cytohesin 3##DQ894912|CYTH3|9265|cytohesin 3##EU176610|CYTH3|9265|cytohesin 3##AJ223957|CYTH3|9265|cytohesin 3##AJ005197|CYTH3|9265|cytohesin 3##NM_004227|CYTH3|9265|cytohesin 3##AK313728|CYTH3|9265|cytohesin 3##BC028717|CYTH3|9265|cytohesin 3##AK022759|USP42|84132|ubiquitin specific peptidase 42##AY618868|USP42|84132|ubiquitin specific peptidase 42##BC060846|USP42|84132|ubiquitin specific peptidase 42##AK309375|USP42|84132|ubiquitin specific peptidase 42##NM_032172|USP42|84132|ubiquitin specific peptidase 42##AK298164|USP42|84132|ubiquitin specific peptidase 42##AK311878|C7orf70|84792|chromosome 7 open reading frame 70##AF533707|C7orf70|84792|chromosome 7 open reading frame 70##BC006110|C7orf70|84792|chromosome 7 open reading frame 70##NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70##BC142977|C7orf70|84792|chromosome 7 open reading frame 70##NM_006908|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##NM_018890|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK054993|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC107748|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291806|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB209410|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC050687|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291815|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AY279384|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC004247|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451238|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451363|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF136373|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF498964|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AJ132694|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BT007121|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU831965|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832058|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832640|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832717|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M29870|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M31467|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK298910|DAGLB|221955|diacylglycerol lipase, beta	0.995027	CTCF.p2:13:0.995
chr5	159626459	159626605	reg1001824.p1	16.004	+	NM_001040442 AB528665	-452	+	DQ132786 NM_001130958	-12159	+	TSC_hg19_v1_chr5_-_159546405 AB067522 BC035076 BC105110 BC143437 NM_001130864 NM_052927	-80073	-	NM_001445 X90908 U19869 CU692652	29967	+	AK294000 TSC_hg19_v1_chr5_-_159739572 BC035871 NM_024565 AK302823	113012	-	TSC_hg19_v1_chr5_-_159797619 BC054506 BC011699 AF329836 AB590457 AY358839 NM_031908	171100	-	NM_001040442|FABP6|2172|fatty acid binding protein 6, ileal##DQ132786|FABP6|2172|fatty acid binding protein 6, ileal##NM_001130958|FABP6|2172|fatty acid binding protein 6, ileal##AB067522|PWWP2A|114825|PWWP domain containing 2A##BC035076|PWWP2A|114825|PWWP domain containing 2A##BC105110|PWWP2A|114825|PWWP domain containing 2A##BC143437|PWWP2A|114825|PWWP domain containing 2A##NM_001130864|PWWP2A|114825|PWWP domain containing 2A##NM_052927|PWWP2A|114825|PWWP domain containing 2A##NM_001445|FABP6|2172|fatty acid binding protein 6, ileal##X90908|FABP6|2172|fatty acid binding protein 6, ileal##U19869|FABP6|2172|fatty acid binding protein 6, ileal##AK294000|CCNJL|79616|cyclin J-like##BC035871|CCNJL|79616|cyclin J-like##NM_024565|CCNJL|79616|cyclin J-like##AK302823|CCNJL|79616|cyclin J-like##BC054506|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##BC011699|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##AF329836|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##AY358839|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##NM_031908|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2	0.998796	CTCF.p2:-7:0.999
chr10	104677307	104677439	reg1000546.p1	16.003	+	NM_020682 AK057833 AK225972 AF226730 AK309737 BC119637 BC119638	-48116	+	NM_001136200 NM_144591 AL832477 TSC_hg19_v1_chr10_+_104614015 AK098071 BC015994 BC040069 AK311742	-63372	+	AK308466 BT020000 CU687686 BC062997 BC063388 BC032843 M14564 TSC_hg19_v1_chr10_-_104597171 AK289898 AK094106 AK312235 NM_000102	-80189	-	TSC_hg19_v1_chr10_+_104678078 BC021222 AK023479 NM_017649 NM_199076 NM_199077	684	+	BX648078 TSC_hg19_v1_chr10_-_104953030 BC001595 AK127670 AK291667 AK312517 D38524 NM_001134373 NM_012229	275674	-	BC157875 BC171885 NM_001143909 BC137242 BC137243 BC157829 BC171806	328300	+	NM_020682|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK057833|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK225972|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AF226730|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK309737|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119637|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119638|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32##NM_144591|C10orf32|119032|chromosome 10 open reading frame 32##AL832477|C10orf32|119032|chromosome 10 open reading frame 32##AK098071|C10orf32|119032|chromosome 10 open reading frame 32##BC015994|C10orf32|119032|chromosome 10 open reading frame 32##BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT readthrough##AK311742|C10orf32|119032|chromosome 10 open reading frame 32##AK308466|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BT020000|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC062997|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC063388|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC032843|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##M14564|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK289898|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK094106|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK312235|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##NM_000102|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC021222|CNNM2|54805|cyclin M2##AK023479|CNNM2|54805|cyclin M2##NM_017649|CNNM2|54805|cyclin M2##NM_199076|CNNM2|54805|cyclin M2##NM_199077|CNNM2|54805|cyclin M2##BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II##BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II##AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II##AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II##AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II##D38524|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II##BC157875|LOC729020|729020|rcRPE##BC171885|LOC729020|729020|rcRPE##NM_001143909|LOC729020|729020|rcRPE##BC137242|LOC729020|729020|rcRPE##BC137243|LOC729020|729020|rcRPE##BC157829|LOC729020|729020|rcRPE##BC171806|LOC729020|729020|rcRPE	0.936446	CTCF.p2:-12:0.936
chr4	112952988	112953123	reg1001332.p2	16.002	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1389777	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1394886	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-1408780	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	113559	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	200029	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	253946	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.540155	CTCF.p2:20:0.540
chr7	123512434	123512560	reg1001218.p1	16.002	+	AF009010 NM_012269	-27275	+	TSC_hg19_v1_chr7_-_123389069 AM295156 CU690940 AB587496 BC013776 AK289795 D88460 CR749438 BC028602 BC052955 NM_003941	-123523	-	NM_207163 AK299434 AK299389 AK300698 AK309449 BC017911 BC062765 AK309496 AB591033	-216560	+	NM_001174044 NM_003117 NM_153189 AY920278 AY920279 S67798 BC026163	52829	+	AK292229 NM_001174045 NM_001174046 AY920280 AY920281	53423	+	TSC_hg19_v1_chr7_-_123673486 NM_001136002	161007	-	AF009010|HYAL4|23553|hyaluronoglucosaminidase 4##NM_012269|HYAL4|23553|hyaluronoglucosaminidase 4##AM295156|WASL|8976|Wiskott-Aldrich syndrome-like##BC013776|WASL|8976|Wiskott-Aldrich syndrome-like##AK289795|WASL|8976|Wiskott-Aldrich syndrome-like##D88460|WASL|8976|Wiskott-Aldrich syndrome-like##CR749438|WASL|8976|Wiskott-Aldrich syndrome-like##BC028602|WASL|8976|Wiskott-Aldrich syndrome-like##BC052955|WASL|8976|Wiskott-Aldrich syndrome-like##NM_003941|WASL|8976|Wiskott-Aldrich syndrome-like##NM_207163|LMOD2|442721|leiomodin 2 (cardiac)##AK299434|LMOD2|442721|leiomodin 2 (cardiac)##AK299389|LMOD2|442721|leiomodin 2 (cardiac)##AK300698|LMOD2|442721|leiomodin 2 (cardiac)##BC017911|LMOD2|442721|leiomodin 2 (cardiac)##BC062765|LMOD2|442721|leiomodin 2 (cardiac)##NM_001174044|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_003117|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_153189|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920278|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920279|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##S67798|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##BC026163|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AK292229|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174045|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174046|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920280|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920281|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001136002|TMEM229A|730130|transmembrane protein 229A	0.0	
chr10	90595507	90595640	reg1001922.p1	16.001	+	EF426484 NM_001128215	-33087	+	EF426483 NM_001102469	-74411	+	AB528790 EF426482 NM_001080518	-111273	+	AX721211 NM_144590	16130	-	TSC_hg19_v1_chr10_+_90640003 AK056086 BC010846 NM_020799	44405	+	J05192 X13839 BC017554 TSC_hg19_v1_chr10_-_90712531 AK300353 BC093052 AK300664 AK313294 NM_001613	116971	-	EF426484|LIPM|340654|lipase, family member M##NM_001128215|LIPM|340654|lipase, family member M##EF426483|LIPN|643418|lipase, family member N##NM_001102469|LIPN|643418|lipase, family member N##EF426482|LIPK|643414|lipase, family member K##NM_001080518|LIPK|643414|lipase, family member K##NM_144590|ANKRD22|118932|ankyrin repeat domain 22##AK056086|STAMBPL1|57559|STAM binding protein-like 1##BC010846|STAMBPL1|57559|STAM binding protein-like 1##NM_020799|STAMBPL1|57559|STAM binding protein-like 1##J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta##X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta	1.014821	CTCF.p2:-11:0.999
chr3	167098103	167098242	reg1001975.p1	16.000	+	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	-95	-	NM_000055 TSC_hg19_v1_chr3_-_165555283	-1542905	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	-1542979	-	AK226025 AB006423 NM_006217 AK293391	93648	-	BC035512 NM_178824	273116	-	TSC_hg19_v1_chr3_-_167371732 AK097556	273551	-	AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing##NM_000055|BCHE|590|butyrylcholinesterase##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##BC035512|WDR49|151790|WD repeat domain 49##NM_178824|WDR49|151790|WD repeat domain 49##AK097556|WDR49|151790|WD repeat domain 49	0.929649	CTCF.p2:5:0.919
chr8	23550247	23550363	reg1001351.p1	16.000	+	AB464643 AF249669 AF249670 AF249671 AF249672 EU446642 U91540 U80669 BC074863 BC074864 BC111569 BC111574 AF247704 NM_006167 TSC_hg19_v1_chr8_-_23540449	-9874	-	BC033834 BC069168 TSC_hg19_v1_chr8_+_23427607 AF116640	-122754	+	AK074708 AK223194 AF223466 AY032628 BC015013 TSC_hg19_v1_chr8_+_23386513 HQ258387 AK075313 AL833186	-163782	+	AB464642 NM_001136271	13805	-	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	162006	-	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	601302	+	AF249669|NKX3-1|4824|NK3 homeobox 1##AF249670|NKX3-1|4824|NK3 homeobox 1##AF249671|NKX3-1|4824|NK3 homeobox 1##AF249672|NKX3-1|4824|NK3 homeobox 1##EU446642|NKX3-1|4824|NK3 homeobox 1##U91540|NKX3-1|4824|NK3 homeobox 1##U80669|NKX3-1|4824|NK3 homeobox 1##BC074863|NKX3-1|4824|NK3 homeobox 1##BC074864|NKX3-1|4824|NK3 homeobox 1##AF247704|NKX3-1|4824|NK3 homeobox 1##NM_006167|NKX3-1|4824|NK3 homeobox 1##BC033834|SLC25A37|51312|solute carrier family 25, member 37##AF116640|SLC25A37|51312|solute carrier family 25, member 37##AK074708|SLC25A37|51312|solute carrier family 25, member 37##AK223194|SLC25A37|51312|solute carrier family 25, member 37##AF223466|SLC25A37|51312|solute carrier family 25, member 37##AY032628|SLC25A37|51312|solute carrier family 25, member 37##BC015013|SLC25A37|51312|solute carrier family 25, member 37##HQ258387|SLC25A37|51312|solute carrier family 25, member 37##AK075313|SLC25A37|51312|solute carrier family 25, member 37##AL833186|SLC25A37|51312|solute carrier family 25, member 37##AB464642|NKX2-6|137814|NK2 homeobox 6##NM_001136271|NKX2-6|137814|NK2 homeobox 6##BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28	0.905785	CTCF.p2:22:0.906
chr2	10975556	10975700	reg1002766.p1	15.999	+	TSC_hg19_v1_chr2_-_10952912 AK294347 D49489 BC001312 NM_005742	-22708	-	TSC_hg19_v1_chr2_-_10952851 DQ891186 DQ894369 AK289428	-22800	-	TSC_hg19_v1_chr2_-_10942759 AK225496 U79278	-32924	-	BC026110 NM_002236 TSC_hg19_v1_chr2_+_11052109	76457	+	AK057872 NM_182500 BC120930 AK292828	297588	+	BC027625 NM_152391 TSC_hg19_v1_chr2_+_11295562	319923	+	AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6##D49489|PDIA6|10130|protein disulfide isomerase family A, member 6##BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6##NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6##AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6##AK225496|PDIA6|10130|protein disulfide isomerase family A, member 6##U79278|PDIA6|10130|protein disulfide isomerase family A, member 6##BC026110|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##NM_002236|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##AK057872|C2orf50|130813|chromosome 2 open reading frame 50##NM_182500|C2orf50|130813|chromosome 2 open reading frame 50##BC120930|C2orf50|130813|chromosome 2 open reading frame 50##AK292828|C2orf50|130813|chromosome 2 open reading frame 50##BC027625|PQLC3|130814|PQ loop repeat containing 3##NM_152391|PQLC3|130814|PQ loop repeat containing 3	0.909458	CTCF.p2:-10:0.909
chr10	93847628	93847771	reg1001708.p1	15.998	+	TSC_hg19_v1_chr10_+_93683569 AF038362 NM_003972 BC112201 AJ001017	-164007	+	TSC_hg19_v1_chr10_+_93683526 AK308399	-164183	+	AK315427 BC025966 AK075410 NM_152429	-178479	-	AB023157 NM_001178137 TSC_hg19_v1_chr10_-_94003035	155320	-	TSC_hg19_v1_chr10_-_94050827 BC036444 AK302576 NM_014912	203137	-	TSC_hg19_v1_chr10_+_94050959 AK000452 AK309175 NM_017824 AK294799 BC015480 AB191202 AB529108	203355	+	AF038362|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##NM_003972|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##BC112201|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AJ001017|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AK308399|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AK315427|FGFBP3|143282|fibroblast growth factor binding protein 3##BC025966|FGFBP3|143282|fibroblast growth factor binding protein 3##AK075410|FGFBP3|143282|fibroblast growth factor binding protein 3##NM_152429|FGFBP3|143282|fibroblast growth factor binding protein 3##AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##BC036444|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK302576|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_014912|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK000452|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK309175|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##NM_017824|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK294799|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##BC015480|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AB191202|MARCH5|54708|membrane-associated ring finger (C3HC4) 5	1.115877	CTCF.p2:-13:0.793	CTCF.p2:-91:0.322
chr17	59713424	59713556	reg1002074.p1	15.997	+	CU687600 BC062710 NM_199290 TSC_hg19_v1_chr17_-_59668583	-44928	-	AF188703 NM_018488 BC136403 BC144062 AB464284	-179662	+	BC142620 TSC_hg19_v1_chr17_+_59529788	-183704	+	BC101472 BC101474 AF360549 TSC_hg19_v1_chr17_-_59940873 NM_032043	227304	-	TSC_hg19_v1_chr17_-_60005339 AB033113 AK308307 AK299032 AL136800 NM_020748	291852	-	TSC_hg19_v1_chr17_-_60142600 BC140891 AF117754 NM_005121	429137	-	BC062710|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##NM_199290|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##AF188703|TBX4|9496|T-box 4##NM_018488|TBX4|9496|T-box 4##BC136403|TBX4|9496|T-box 4##BC144062|TBX4|9496|T-box 4##BC142620|TBX4|9496|T-box 4##BC101472|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##BC101474|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AF360549|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_032043|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AB033113|INTS2|57508|integrator complex subunit 2##AK308307|INTS2|57508|integrator complex subunit 2##AK299032|INTS2|57508|integrator complex subunit 2##AL136800|INTS2|57508|integrator complex subunit 2##NM_020748|INTS2|57508|integrator complex subunit 2##BC140891|MED13|9969|mediator complex subunit 13##AF117754|MED13|9969|mediator complex subunit 13##NM_005121|MED13|9969|mediator complex subunit 13	0.275944	CTCF.p2:-6:0.276
chr10	90973115	90973225	reg1001685.p1	15.996	+	CU687230 DQ892026 DQ895218 BC072430 AF059214 BC017843 NM_003956 AK314865	-6110	-	AK311424 TSC_hg19_v1_chr10_+_90751184 AK311164 AK311499	-222049	+	TSC_hg19_v1_chr10_-_90751090 AY692464 NM_001141945	-222120	-	U08464 Z31690 TSC_hg19_v1_chr10_-_91011533 AK222760 AK290241 AK297079 AK314665 M74775	38360	-	AK130882 TSC_hg19_v1_chr10_-_91011565	38397	-	TSC_hg19_v1_chr10_-_91011616 BC012287 X76488 NM_000235 NM_001127605	38452	-	DQ892026|CH25H|9023|cholesterol 25-hydroxylase##DQ895218|CH25H|9023|cholesterol 25-hydroxylase##BC072430|CH25H|9023|cholesterol 25-hydroxylase##AF059214|CH25H|9023|cholesterol 25-hydroxylase##BC017843|CH25H|9023|cholesterol 25-hydroxylase##NM_003956|CH25H|9023|cholesterol 25-hydroxylase##AK314865|CH25H|9023|cholesterol 25-hydroxylase##AK311424|FAS|355|Fas (TNF receptor superfamily, member 6)##AK311164|FAS|355|Fas (TNF receptor superfamily, member 6)##AK311499|FAS|355|Fas (TNF receptor superfamily, member 6)##AY692464|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001141945|ACTA2|59|actin, alpha 2, smooth muscle, aorta##U08464|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##Z31690|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK222760|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK290241|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK297079|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK314665|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##M74775|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK130882|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##BC012287|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##X76488|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_000235|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_001127605|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	0.997461	CTCF.p2:-6:0.997
chr17	698199	698310	reg1001234.p1	15.996	+	BC011550 TSC_hg19_v1_chr17_+_685611 BC050614 AK225128 AB590841 CU679954 CU690740	-12640	+	AF177344 NM_018146 TSC_hg19_v1_chr17_+_685592 AK001443 AK222900	-12696	+	TSC_hg19_v1_chr17_-_685521 AK226083 AK292315 BC008605 CU677471 AK296584 AF061730 AF177342 AK301751 BC010902 BC015848 AK001488 AF177343 NM_016080	-12774	-	BC009327 AK302073 NM_001205319	69064	-	TSC_hg19_v1_chr17_-_882986 AB590045 NM_022463	184746	-	TSC_hg19_v1_chr17_+_900368 BC002324 NM_013337 AK000830 AK225453 AF155330	202101	+	BC011550|RNMTL1|55178|RNA methyltransferase like 1##BC050614|RNMTL1|55178|RNA methyltransferase like 1##AK225128|RNMTL1|55178|RNA methyltransferase like 1##AF177344|RNMTL1|55178|RNA methyltransferase like 1##NM_018146|RNMTL1|55178|RNA methyltransferase like 1##AK001443|RNMTL1|55178|RNA methyltransferase like 1##AK222900|RNMTL1|55178|RNA methyltransferase like 1##AK226083|GLOD4|51031|glyoxalase domain containing 4##AK292315|GLOD4|51031|glyoxalase domain containing 4##BC008605|GLOD4|51031|glyoxalase domain containing 4##AK296584|GLOD4|51031|glyoxalase domain containing 4##AF061730|GLOD4|51031|glyoxalase domain containing 4##AF177342|GLOD4|51031|glyoxalase domain containing 4##AK301751|GLOD4|51031|glyoxalase domain containing 4##BC010902|GLOD4|51031|glyoxalase domain containing 4##BC015848|GLOD4|51031|glyoxalase domain containing 4##AK001488|GLOD4|51031|glyoxalase domain containing 4##AF177343|GLOD4|51031|glyoxalase domain containing 4##NM_016080|GLOD4|51031|glyoxalase domain containing 4##BC009327|NXN|64359|nucleoredoxin##AK302073|NXN|64359|nucleoredoxin##NM_001205319|NXN|64359|nucleoredoxin##NM_022463|NXN|64359|nucleoredoxin##BC002324|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##NM_013337|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK000830|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK225453|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AF155330|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)	0.945624	CTCF.p2:-2:0.946
chr19	15288404	15288527	reg1001745.p1	15.996	+	TSC_hg19_v1_chr19_-_15236518 U61263 BC011761 BC011722 NM_006844	-51929	-	BC000109 TSC_hg19_v1_chr19_-_15236004	-52477	-	BC126913 CU680024 CU680048 TSC_hg19_v1_chr19_-_15235944	-52619	-	TSC_hg19_v1_chr19_-_15311808 AB209447 NM_000435 U97669	23333	-	BC132958 BC132960 AK026061 NM_024794	54747	-	BC115002 NM_001142886	55347	-	U61263|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC011761|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC011722|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##NM_006844|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC000109|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC126913|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##AB209447|NOTCH3|4854|notch 3##NM_000435|NOTCH3|4854|notch 3##U97669|NOTCH3|4854|notch 3##BC132958|EPHX3|79852|epoxide hydrolase 3##BC132960|EPHX3|79852|epoxide hydrolase 3##AK026061|EPHX3|79852|epoxide hydrolase 3##NM_024794|EPHX3|79852|epoxide hydrolase 3##BC115002|EPHX3|79852|epoxide hydrolase 3##NM_001142886|EPHX3|79852|epoxide hydrolase 3	0.913984	CTCF.p2:1:0.914
chr15	67749402	67749537	reg1001876.p1	15.994	+	TSC_hg19_v1_chr15_+_67547171 BC039463 NM_001031715 NM_022784 AY014282 AK292478 AK304303 BC031041 BC048964 BC039292 AK022538 CU690588	-202295	+	AB528136 AM393020 AM393411 CR533540 CU691322 TSC_hg19_v1_chr15_-_67547000 AK021568 AL136715 BC058886 BC047026 BC035852 NM_024666	-202449	-	NM_001145104 AK300614 AK301348	-290973	+	TSC_hg19_v1_chr15_+_67813533 NM_001143936 AK294012 AY726587	64078	+	TSC_hg19_v1_chr15_-_67814131 BC047537	64687	-	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	85553	+	BC039463|IQCH|64799|IQ motif containing H##NM_001031715|IQCH|64799|IQ motif containing H##NM_022784|IQCH|64799|IQ motif containing H##AY014282|IQCH|64799|IQ motif containing H##AK292478|IQCH|64799|IQ motif containing H##AK304303|IQCH|64799|IQ motif containing H##BC031041|IQCH|64799|IQ motif containing H##BC048964|IQCH|64799|IQ motif containing H##BC039292|IQCH|64799|IQ motif containing H##AK022538|IQCH|64799|IQ motif containing H##AM393020|AAGAB|79719|alpha- and gamma-adaptin binding protein##AM393411|AAGAB|79719|alpha- and gamma-adaptin binding protein##CR533540|AAGAB|79719|alpha- and gamma-adaptin binding protein##AK021568|AAGAB|79719|alpha- and gamma-adaptin binding protein##AL136715|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC058886|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC047026|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC035852|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_024666|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3##NM_001143936|C15orf61|145853|chromosome 15 open reading frame 61##AK294012|C15orf61|145853|chromosome 15 open reading frame 61##AY726587|C15orf61|145853|chromosome 15 open reading frame 61##BC047537|LOC100506686|100506686|uncharacterized LOC100506686##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5	0.990514	CTCF.p2:-6:0.991
chr11	33992678	33992807	reg1001672.p1	15.992	+	NM_005574 X61118	-78907	-	TSC_hg19_v1_chr11_-_33891485 NM_001142315	-101246	-	BC042426 TSC_hg19_v1_chr11_-_33891402 BC034041 NM_001142316	-101351	-	TSC_hg19_v1_chr11_+_34073238 BC001731 NM_005898 NM_203364	80471	+	TSC_hg19_v1_chr11_+_34073889 AK299720	81162	+	TSC_hg19_v1_chr11_+_34073950 Z48042	81195	+	NM_005574|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##X61118|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142315|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC042426|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC034041|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142316|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC001731|CAPRIN1|4076|cell cycle associated protein 1##NM_005898|CAPRIN1|4076|cell cycle associated protein 1##NM_203364|CAPRIN1|4076|cell cycle associated protein 1##AK299720|CAPRIN1|4076|cell cycle associated protein 1##Z48042|CAPRIN1|4076|cell cycle associated protein 1	0.981927	CTCF.p2:17:0.982
chr7	97650964	97651072	reg1001156.p1	15.991	+	TSC_hg19_v1_chr7_-_97619350 AB528806 NM_006188	-31636	-	TSC_hg19_v1_chr7_-_97601657 BC030024	-49358	-	BC062733 TSC_hg19_v1_chr7_-_97601645 BC029615	-49375	-	TSC_hg19_v1_chr7_+_97736173 AB029002 BC146773 NM_014916 BC131504 AB384558 AB590084 AY130988	85318	+	BC113394 BC113396 NM_177455 AB464465	190573	+	TSC_hg19_v1_chr7_-_97881512 AK292996 BC053591 NM_015395 AK057048	230481	-	NM_006188|OCM2|4951|oncomodulin 2##BC062733|MGC72080|389538|MGC72080 pseudogene##BC029615|MGC72080|389538|MGC72080 pseudogene##AB029002|LMTK2|22853|lemur tyrosine kinase 2##BC146773|LMTK2|22853|lemur tyrosine kinase 2##NM_014916|LMTK2|22853|lemur tyrosine kinase 2##BC131504|LMTK2|22853|lemur tyrosine kinase 2##AY130988|LMTK2|22853|lemur tyrosine kinase 2##BC113394|BHLHA15|168620|basic helix-loop-helix family, member a15##BC113396|BHLHA15|168620|basic helix-loop-helix family, member a15##NM_177455|BHLHA15|168620|basic helix-loop-helix family, member a15##AK292996|TECPR1|25851|tectonin beta-propeller repeat containing 1##BC053591|TECPR1|25851|tectonin beta-propeller repeat containing 1##NM_015395|TECPR1|25851|tectonin beta-propeller repeat containing 1##AK057048|TECPR1|25851|tectonin beta-propeller repeat containing 1	0.999887	CTCF.p2:-2:1.000
chr18	49814896	49815014	reg1001290.p1	15.990	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-1090915	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-1091243	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-1091729	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	51586	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	52158	+	TSC_hg19_v1_chr18_-_51690988 AL110266	1876037	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.507553	CTCF.p2:9:0.508
chr4	1124484	1124611	reg1001837.p1	15.987	+	BC101258 BC101259 BC101260 BC101261 BC036250 AK310043 BC050356 AK096160 NM_001131034 NM_001193318 NM_194439	-17215	-	AJ277437 NM_021923 AB385230 DQ892417 DQ895631 AK225486	-118282	+	AF312678 AY358303 NM_001004356 AF279689 NM_001004358	-118863	+	TSC_hg19_v1_chr4_-_1166372 AK130164	41822	-	TSC_hg19_v1_chr4_-_1166378 BC002707	41841	-	TSC_hg19_v1_chr4_-_1166480 AK074618	41940	-	BC101258|RNF212|285498|ring finger protein 212##BC101259|RNF212|285498|ring finger protein 212##BC101260|RNF212|285498|ring finger protein 212##BC101261|RNF212|285498|ring finger protein 212##BC036250|RNF212|285498|ring finger protein 212##AK310043|RNF212|285498|ring finger protein 212##BC050356|RNF212|285498|ring finger protein 212##AK096160|RNF212|285498|ring finger protein 212##NM_001131034|RNF212|285498|ring finger protein 212##NM_001193318|RNF212|285498|ring finger protein 212##NM_194439|RNF212|285498|ring finger protein 212##AJ277437|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_021923|FGFRL1|53834|fibroblast growth factor receptor-like 1##DQ892417|FGFRL1|53834|fibroblast growth factor receptor-like 1##DQ895631|FGFRL1|53834|fibroblast growth factor receptor-like 1##AK225486|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF312678|FGFRL1|53834|fibroblast growth factor receptor-like 1##AY358303|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004356|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF279689|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004358|FGFRL1|53834|fibroblast growth factor receptor-like 1##AK130164|SPON2|10417|spondin 2, extracellular matrix protein##BC002707|SPON2|10417|spondin 2, extracellular matrix protein##AK074618|SPON2|10417|spondin 2, extracellular matrix protein	0.998998	CTCF.p2:-9:0.999
chr8	134461830	134461949	reg1001285.p2	15.986	+	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-152392	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-258559	+	NM_001045556 NM_001045557	-346580	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	122208	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1246905	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1263190	-	AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.999857	CTCF.p2:10:1.000
chr6	11496536	11496687	reg1001400.p1	15.985	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-114071	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-263701	-	L43821 TSC_hg19_v1_chr6_-_11232900	-263711	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	41887	+	NM_001143948 NM_032744	282668	-	NM_002114	516112	+	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1	0.149585	
chr1	155140455	155140572	reg1001041.p2	15.983	+	AB028128 BC032223 BC104202 BC104203 AF312922 NM_018973 AF312923 NM_153741 BC065233 AK293625 TSC_hg19_v1_chr1_-_155113008 BC104481	-27643	-	BC005943 TSC_hg19_v1_chr1_+_155108343 BC010869 BC069245 CR457148 CU679421	-32148	+	TSC_hg19_v1_chr1_+_155108327 AK289551 NM_001122837 NM_001122839 NM_018845 AF126023 BC009621 AF126024 BC012378	-32204	+	TSC_hg19_v1_chr1_-_155145674 BC048205	5172	-	BX647396 TSC_hg19_v1_chr1_-_155145781 AK311907 AK024167 CU691196 DQ890793 DQ893948 BC029806 NM_173852 BC057233	5257	-	AK296300 TSC_hg19_v1_chr1_+_155146298	5771	+	AB028128|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##BC032223|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##BC104202|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##BC104203|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##AF312922|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##NM_018973|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##AF312923|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##NM_153741|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##BC065233|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##AK293625|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##BC104481|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##BC005943|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC010869|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC069245|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##CR457148|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AK289551|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122837|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122839|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_018845|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126023|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC009621|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126024|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC012378|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC048205|KRTCAP2|200185|keratinocyte associated protein 2##BX647396|KRTCAP2|200185|keratinocyte associated protein 2##AK311907|KRTCAP2|200185|keratinocyte associated protein 2##AK024167|KRTCAP2|200185|keratinocyte associated protein 2##DQ890793|KRTCAP2|200185|keratinocyte associated protein 2##DQ893948|KRTCAP2|200185|keratinocyte associated protein 2##BC029806|KRTCAP2|200185|keratinocyte associated protein 2##NM_173852|KRTCAP2|200185|keratinocyte associated protein 2##BC057233|KRTCAP2|200185|keratinocyte associated protein 2##AK296300|TRIM46|80128|tripartite motif containing 46	0.992288	CTCF.p2:11:0.992
chr6	150401905	150402042	reg1002069.p1	15.981	+	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	-11760	-	BC131600 AB528849 AY039682 NM_130900	-55340	-	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	-116811	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	62268	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	288185	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	519047	+	AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L##AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1	1.072622	CTCF.p2:-7:0.993
chr10	94840156	94840272	reg1001153.p1	15.975	+	AK075374 NM_000783 AF005418	-6558	+	AK027560 NM_057157	-6983	+	AY356349 NM_183374	-19194	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	401834	-	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	416174	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	486295	+	AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1	0.904321	CTCF.p2:-4:0.904
chr2	26368050	26368190	reg1001992.p1	15.973	+	AF086917 AF106681 BC000896 AB529109 AF297660 AF498945 CR457303 EU831649 EU831733 TSC_hg19_v1_chr2_+_26257540 AF091032	-110653	+	NM_016131 TSC_hg19_v1_chr2_+_26256952 AL136650 AK023223	-111266	+	TSC_hg19_v1_chr2_-_26205437 NM_002254	-162680	-	AB124552 NM_001168241	27839	+	AK090454 NM_001191033	35464	+	CU679263 DQ892776 DQ896023 FJ626228 TSC_hg19_v1_chr2_-_26467495 AK302532 AK293398 AK299258 AK313027 D16480 BC009235 GU727642 U04627	99361	-	AF086917|RAB10|10890|RAB10, member RAS oncogene family##AF106681|RAB10|10890|RAB10, member RAS oncogene family##BC000896|RAB10|10890|RAB10, member RAS oncogene family##AF297660|RAB10|10890|RAB10, member RAS oncogene family##AF498945|RAB10|10890|RAB10, member RAS oncogene family##CR457303|RAB10|10890|RAB10, member RAS oncogene family##EU831649|RAB10|10890|RAB10, member RAS oncogene family##EU831733|RAB10|10890|RAB10, member RAS oncogene family##AF091032|RAB10|10890|RAB10, member RAS oncogene family##NM_016131|RAB10|10890|RAB10, member RAS oncogene family##AL136650|RAB10|10890|RAB10, member RAS oncogene family##AK023223|RAB10|10890|RAB10, member RAS oncogene family##NM_002254|KIF3C|3797|kinesin family member 3C##AB124552|FAM59B|150946|family with sequence similarity 59, member B##NM_001168241|FAM59B|150946|family with sequence similarity 59, member B##AK090454|FAM59B|150946|family with sequence similarity 59, member B##NM_001191033|FAM59B|150946|family with sequence similarity 59, member B##DQ892776|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##DQ896023|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##FJ626228|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK302532|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK293398|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK299258|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK313027|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##D16480|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##BC009235|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##GU727642|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##U04627|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit	0.024717	
chr10	30681564	30681693	reg1001910.p1	15.970	+	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	-43395	-	TSC_hg19_v1_chr10_-_30348516 AK308850 NM_020848 BC071601	-333134	-	TSC_hg19_v1_chr10_-_30316350 BC047548	-365197	-	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	41311	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	41493	+	AF139543 BC066294 NM_183058	237007	-	AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##AK308850|KIAA1462|57608|KIAA1462##NM_020848|KIAA1462|57608|KIAA1462##BC071601|KIAA1462|57608|KIAA1462##BC047548|KIAA1462|57608|KIAA1462##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2	0.997139	CTCF.p2:-20:0.997
chr14	23246795	23246912	reg1000938.p1	15.968	+	BC112331 NM_005015 TSC_hg19_v1_chr14_+_23235896 AK294849 AK298249 BC001669 X80695 BX248295 BX248001	-11008	+	TSC_hg19_v1_chr14_+_23067208 AK022878 NM_022060 AX721056 BC024779 AK298127 AK301315 AK293198	-179664	+	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	-188719	-	TSC_hg19_v1_chr14_-_23284568 AK025377	37726	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	37779	-	AB020532 BX161519 NM_001126105	38205	-	BC112331|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##NM_005015|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK294849|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK298249|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BC001669|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##X80695|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248295|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248001|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK022878|ABHD4|63874|abhydrolase domain containing 4##NM_022060|ABHD4|63874|abhydrolase domain containing 4##BC024779|ABHD4|63874|abhydrolase domain containing 4##AK298127|ABHD4|63874|abhydrolase domain containing 4##AK301315|ABHD4|63874|abhydrolase domain containing 4##AK293198|ABHD4|63874|abhydrolase domain containing 4##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1##AK025377|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AB020532|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX161519|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126105|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	0.900788	CTCF.p2:-9:0.901
chr18	77404168	77404323	reg1001966.p1	15.964	+	BC045628 TSC_hg19_v1_chr18_+_77253425	-150865	+	TSC_hg19_v1_chr18_+_77160328 NM_172387 NM_172389 U59736 AK293760 U80918 X99829 EU887560 EU887562 EU887564 EU887566	-243928	+	TSC_hg19_v1_chr18_+_77155967 U08015 BC104753 BC112243 BC143457 EU887559 EU887561 EU887563 EU887565	-248150	+	TSC_hg19_v1_chr18_-_77439359 AK002023	35068	-	TSC_hg19_v1_chr18_-_77439740 AK098581	35496	-	TSC_hg19_v1_chr18_+_77439801 BC047999 NM_004715 NM_048368	35556	+	BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172387|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172389|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U59736|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK293760|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80918|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887560|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887562|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887564|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887566|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U08015|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC104753|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC112243|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC143457|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887559|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887561|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887563|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887565|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK098581|FLJ25715|284241|uncharacterized protein FLJ25715##BC047999|CTDP1|9150|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1##NM_004715|CTDP1|9150|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1##NM_048368|CTDP1|9150|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	1.088253	CTCF.p2:15:0.960
chr11	117817744	117817869	reg1001040.p2	15.962	+	BC018715 AK300283 AB048796 AB048797 BC114928 AY190317 AK027798 TSC_hg19_v1_chr11_-_117800150 NM_001077263 NM_001206789 NM_001206790 NM_001244995	-17689	-	NM_001164831	-69606	-	TSC_hg19_v1_chr11_-_117747623 AK289629 NM_001164832 NM_001164836 NM_001164837 NM_001204268 NM_001243598 NM_022003	-70125	-	TSC_hg19_v1_chr11_+_117857108 AK291645 AK301484 NM_001558 AK301260 AK316342 AK313049 AK301492	39284	+	TSC_hg19_v1_chr11_+_117857155 U00672 BC028082 AB590303 CU688390 DQ891031 DQ893720 AK316146 AB209626	39481	+	NM_001083947 NM_001173551 NM_001173552 NM_019894 AK304113 AK311290 TSC_hg19_v1_chr11_+_117947754	129937	+	BC018715|TMPRSS13|84000|transmembrane protease, serine 13##AK300283|TMPRSS13|84000|transmembrane protease, serine 13##AB048796|TMPRSS13|84000|transmembrane protease, serine 13##AB048797|TMPRSS13|84000|transmembrane protease, serine 13##BC114928|TMPRSS13|84000|transmembrane protease, serine 13##AY190317|TMPRSS13|84000|transmembrane protease, serine 13##AK027798|TMPRSS13|84000|transmembrane protease, serine 13##NM_001077263|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206789|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206790|TMPRSS13|84000|transmembrane protease, serine 13##NM_001244995|TMPRSS13|84000|transmembrane protease, serine 13##NM_001164831|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK289629|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164832|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164836|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164837|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001204268|FXYD6-FXYD2|100533181|FXYD6-FXYD2 readthrough##NM_001243598|FXYD6-FXYD2|100533181|FXYD6-FXYD2 readthrough##NM_022003|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK291645|IL10RA|3587|interleukin 10 receptor, alpha##AK301484|IL10RA|3587|interleukin 10 receptor, alpha##NM_001558|IL10RA|3587|interleukin 10 receptor, alpha##AK301260|IL10RA|3587|interleukin 10 receptor, alpha##AK316342|IL10RA|3587|interleukin 10 receptor, alpha##AK313049|IL10RA|3587|interleukin 10 receptor, alpha##AK301492|IL10RA|3587|interleukin 10 receptor, alpha##U00672|IL10RA|3587|interleukin 10 receptor, alpha##BC028082|IL10RA|3587|interleukin 10 receptor, alpha##DQ891031|IL10RA|3587|interleukin 10 receptor, alpha##DQ893720|IL10RA|3587|interleukin 10 receptor, alpha##AK316146|IL10RA|3587|interleukin 10 receptor, alpha##AB209626|IL10RA|3587|interleukin 10 receptor, alpha##NM_001083947|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173551|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173552|TMPRSS4|56649|transmembrane protease, serine 4##NM_019894|TMPRSS4|56649|transmembrane protease, serine 4##AK304113|TMPRSS4|56649|transmembrane protease, serine 4	0.999397	CTCF.p2:2:0.999
chr20	49923426	49923553	reg1002128.p1	15.960	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	-283832	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-348121	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-348426	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	235650	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	235786	-	EU887574 EU887577 NM_001136021	255678	-	BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.978855	CTCF.p2:7:0.979
chr6	44443570	44443690	reg1001309.p1	15.959	+	TSC_hg19_v1_chr6_+_44355461 AK128737 AK299738 BC001568 AB007892 AB590067 CU674768 DQ891623 DQ894814 U86753	-88130	+	NM_001253 TSC_hg19_v1_chr6_+_44355294	-88358	+	NM_145026 AK058171	-133190	+	NM_001015051 NM_001024630 AF053952	852426	+	AF073930 NM_003599 TSC_hg19_v1_chr6_-_45345614 AK303838 BC035816 BC050384 NM_181356 AK313874	902045	-	TSC_hg19_v1_chr6_+_45389825 NM_004348	946235	+	AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_001253|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_145026|SPATS1|221409|spermatogenesis associated, serine-rich 1##AK058171|SPATS1|221409|spermatogenesis associated, serine-rich 1##NM_001015051|RUNX2|860|runt-related transcription factor 2##NM_001024630|RUNX2|860|runt-related transcription factor 2##AF053952|RUNX2|860|runt-related transcription factor 2##AF073930|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_003599|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK303838|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC035816|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC050384|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_181356|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK313874|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_004348|RUNX2|860|runt-related transcription factor 2	0.991791	CTCF.p2:-20:0.992
chr15	65020526	65020637	reg1001201.p2	15.958	+	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	-25112	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	-25179	-	BC119629 BC119630 BC148316 BC127630 TSC_hg19_v1_chr15_-_64995360 BC127631 AF242520 AF242521	-25221	-	BC131612 BC148208 AY369207 NM_194272 TSC_hg19_v1_chr15_-_65067789 AK127873	47165	-	BC137503 BC137504 TSC_hg19_v1_chr15_-_65117814 BC018978 AK026345 EU084033 NM_025049 AB185926 AB185927	97254	-	AK311036 NM_001195059 NM_025201 TSC_hg19_v1_chr15_+_65134113 AK096203 BC008744 AF494534	113526	+	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2##BC131612|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC148208|RBPMS2|348093|RNA binding protein with multiple splicing 2##AY369207|RBPMS2|348093|RNA binding protein with multiple splicing 2##NM_194272|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK127873|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC137503|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC137504|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC018978|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AK026345|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##EU084033|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_025049|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185926|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185927|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_001195059|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##NM_025201|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK096203|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC008744|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AF494534|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2	0.997937	CTCF.p2:2:0.998
chr7	17022372	17022501	reg1000954.p1	15.958	+	AY359065 BC058284 NM_176813	-100832	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-177765	-	TSC_hg19_v1_chr7_+_16793401 AK093487 NM_014399 AK026587 AK075475 AK316595 AY358995 AF100759 BC033863 AF120265 DQ892059 DQ895252 CR542107	-228980	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	315833	+	TSC_hg19_v1_chr7_+_17382906 BC021696	360470	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	957613	-	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK093487|TSPAN13|27075|tetraspanin 13##NM_014399|TSPAN13|27075|tetraspanin 13##AK026587|TSPAN13|27075|tetraspanin 13##AK075475|TSPAN13|27075|tetraspanin 13##AK316595|TSPAN13|27075|tetraspanin 13##AY358995|TSPAN13|27075|tetraspanin 13##AF100759|TSPAN13|27075|tetraspanin 13##BC033863|TSPAN13|27075|tetraspanin 13##AF120265|TSPAN13|27075|tetraspanin 13##DQ892059|TSPAN13|27075|tetraspanin 13##DQ895252|TSPAN13|27075|tetraspanin 13##CR542107|TSPAN13|27075|tetraspanin 13##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13	0.966216	CTCF.p2:-2:0.966
chr3	46746619	46746745	reg1000850.p1	15.957	+	AY081842 NM_147196 BC126258 BC126260	-3842	+	TSC_hg19_v1_chr3_-_46735168 AK131270 NM_001190707 CR627258 AL832203 AB107015 AL832132 NM_147129	-11493	-	AK092455 AX747555 NM_182775 AK126505	-27761	-	EU176497 TSC_hg19_v1_chr3_-_46759380 BC037775 BC033016 AF100707 NM_013270	12666	-	AK097666 NM_001205271	31237	-	BC133695 NM_199183	39562	-	AY081842|TMIE|259236|transmembrane inner ear##NM_147196|TMIE|259236|transmembrane inner ear##BC126258|TMIE|259236|transmembrane inner ear##BC126260|TMIE|259236|transmembrane inner ear##AK131270|ALS2CL|259173|ALS2 C-terminal like##NM_001190707|ALS2CL|259173|ALS2 C-terminal like##CR627258|ALS2CL|259173|ALS2 C-terminal like##AL832203|ALS2CL|259173|ALS2 C-terminal like##AB107015|ALS2CL|259173|ALS2 C-terminal like##AL832132|ALS2CL|259173|ALS2 C-terminal like##NM_147129|ALS2CL|259173|ALS2 C-terminal like##AK092455|ALS2CL|259173|ALS2 C-terminal like##NM_182775|ALS2CL|259173|ALS2 C-terminal like##AK126505|ALS2CL|259173|ALS2 C-terminal like##EU176497|PRSS50|29122|protease, serine, 50##BC037775|PRSS50|29122|protease, serine, 50##BC033016|PRSS50|29122|protease, serine, 50##AF100707|PRSS50|29122|protease, serine, 50##NM_013270|PRSS50|29122|protease, serine, 50##NM_001205271|PRSS46|100287362|protease, serine, 46##BC133695|PRSS45|377047|protease, serine, 45##NM_199183|PRSS45|377047|protease, serine, 45	0.978121	CTCF.p2:-2:0.978
chr4	159778150	159778291	reg1001840.p1	15.956	+	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-87935	+	TSC_hg19_v1_chr4_+_159690177 NM_020840	-88042	+	AB528445 CR542081 DQ891562 DQ894749 TSC_hg19_v1_chr4_-_159644545 BC014893 L11667 BC030707 AK313929 NM_005038	-133692	-	AK058100 NM_152543	178112	-	AK294459 NM_014247	410777	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	3306931	-	AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##NM_020840|FNIP2|57600|folliculin interacting protein 2##CR542081|PPID|5481|peptidylprolyl isomerase D##DQ891562|PPID|5481|peptidylprolyl isomerase D##DQ894749|PPID|5481|peptidylprolyl isomerase D##BC014893|PPID|5481|peptidylprolyl isomerase D##L11667|PPID|5481|peptidylprolyl isomerase D##BC030707|PPID|5481|peptidylprolyl isomerase D##AK313929|PPID|5481|peptidylprolyl isomerase D##NM_005038|PPID|5481|peptidylprolyl isomerase D##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5	0.908837	CTCF.p2:-10:0.909
chr4	43134131	43134269	reg1002007.p1	15.956	+	AB528853 NM_001080476	-238919	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	-475112	-	NM_001080505	-734345	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	1316353	-	AK123347 NM_198353	1316623	-	AK096895 BC103995 BC103996 NM_182592	1519457	-	NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7	0.880309	CTCF.p2:-3:0.880
chr11	1224345	1224447	reg1001179.p1	15.954	+	TSC_hg19_v1_chr11_+_1213469 Z48314	-10922	+	TSC_hg19_v1_chr11_+_1151579 AF015521 AJ298317 AF043909	-72810	+	TSC_hg19_v1_chr11_+_1074873 L21998 NM_002457	-149524	+	TSC_hg19_v1_chr11_+_1244295 NM_002458 AK310939	19900	+	TSC_hg19_v1_chr11_+_1244340 AF086604	19940	+	TSC_hg19_v1_chr11_-_1330680 AY730683 CR533477 AB590101 DQ891802 DQ894986 AM393373	106310	-	Z48314|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AF015521|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AJ298317|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AF043909|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##L21998|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##NM_002457|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##NM_002458|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##AK310939|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##AF086604|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##AY730683|TOLLIP|54472|toll interacting protein##CR533477|TOLLIP|54472|toll interacting protein##DQ891802|TOLLIP|54472|toll interacting protein##DQ894986|TOLLIP|54472|toll interacting protein##AM393373|TOLLIP|54472|toll interacting protein	0.997125	CTCF.p2:-2:0.997
chr2	218375585	218375710	reg1001703.p1	15.953	+	BC029516 NM_003284	-650866	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-815387	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-816081	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	433134	-	AK001785 TSC_hg19_v1_chr2_-_218843551	467899	-	TSC_hg19_v1_chr2_-_218867719 AK309785	492076	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.441674	CTCF.p2:16:0.442
chr6	36270366	36270490	reg1001654.p1	15.953	+	AM182887 FJ457781 NM_001145717	-32192	+	AK096074 NM_173676 BC103905 BC103906 BC103907 NM_001145716	-59467	+	TSC_hg19_v1_chr6_-_36164979 BC042825	-105444	-	BC140873 BX648558 NM_001010903 TSC_hg19_v1_chr6_-_36304663	34197	-	AF175387 AF218365 AF116508 AF116509 AF116510 AF218235 AF218366 BC035853 AK301011 AF147782 AK223424 AJ276205 AK026144 NM_001207038 AK303829 NM_001207035 NM_001207036 NM_001207037 NM_001207039 NM_001207040 NM_001207041 NM_016135	85031	-	BC031105 NM_152990	140237	-	AM182887|PNPLA1|285848|patatin-like phospholipase domain containing 1##FJ457781|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145717|PNPLA1|285848|patatin-like phospholipase domain containing 1##AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC140873|C6orf222|389384|chromosome 6 open reading frame 222##BX648558|C6orf222|389384|chromosome 6 open reading frame 222##NM_001010903|C6orf222|389384|chromosome 6 open reading frame 222##AF175387|ETV7|51513|ets variant 7##AF218365|ETV7|51513|ets variant 7##AF116508|ETV7|51513|ets variant 7##AF116509|ETV7|51513|ets variant 7##AF116510|ETV7|51513|ets variant 7##AF218235|ETV7|51513|ets variant 7##AF218366|ETV7|51513|ets variant 7##BC035853|ETV7|51513|ets variant 7##AK301011|ETV7|51513|ets variant 7##AF147782|ETV7|51513|ets variant 7##AK223424|ETV7|51513|ets variant 7##AJ276205|ETV7|51513|ets variant 7##AK026144|ETV7|51513|ets variant 7##NM_001207038|ETV7|51513|ets variant 7##AK303829|ETV7|51513|ets variant 7##NM_001207035|ETV7|51513|ets variant 7##NM_001207036|ETV7|51513|ets variant 7##NM_001207037|ETV7|51513|ets variant 7##NM_001207039|ETV7|51513|ets variant 7##NM_001207040|ETV7|51513|ets variant 7##NM_001207041|ETV7|51513|ets variant 7##NM_016135|ETV7|51513|ets variant 7##BC031105|PXT1|222659|peroxisomal, testis specific 1##NM_152990|PXT1|222659|peroxisomal, testis specific 1	1.016608	CTCF.p2:-22:0.999
chr19	33921697	33921821	reg1001762.p1	15.951	+	NM_001252296	-56330	+	NM_001806 TSC_hg19_v1_chr19_+_33864635 U20240 BC013128 AK313634	-57107	+	TSC_hg19_v1_chr19_+_33793749 BC027959 AK022417 BC113872 BC114482	-127900	+	TSC_hg19_v1_chr19_-_34012698 BT006692 CR541669 CU677179 DQ891114 DQ894294 BC004305 BC028295 AK225037 AK290756 J04605 AK293126 AK290781 AK291561 AK294619 BC015027 NM_000285 NM_001166056 NM_001166057	90953	-	TSC_hg19_v1_chr19_+_34112858 NM_001127895 NM_001127896 BC014250 BC011380 AB047801	191176	+	BC018723 NM_022467	253674	+	NM_001252296|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##NM_001806|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##U20240|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##BC013128|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##AK313634|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##BC027959|LOC80054|80054|uncharacterized LOC80054##AK022417|LOC80054|80054|uncharacterized LOC80054##BC113872|LOC80054|80054|uncharacterized LOC80054##BC114482|LOC80054|80054|uncharacterized LOC80054##BT006692|PEPD|5184|peptidase D##CR541669|PEPD|5184|peptidase D##DQ891114|PEPD|5184|peptidase D##DQ894294|PEPD|5184|peptidase D##BC004305|PEPD|5184|peptidase D##BC028295|PEPD|5184|peptidase D##AK225037|PEPD|5184|peptidase D##AK290756|PEPD|5184|peptidase D##J04605|PEPD|5184|peptidase D##AK293126|PEPD|5184|peptidase D##AK290781|PEPD|5184|peptidase D##AK291561|PEPD|5184|peptidase D##AK294619|PEPD|5184|peptidase D##BC015027|PEPD|5184|peptidase D##NM_000285|PEPD|5184|peptidase D##NM_001166056|PEPD|5184|peptidase D##NM_001166057|PEPD|5184|peptidase D##NM_001127895|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127896|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC014250|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC011380|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##AB047801|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	0.9781	CTCF.p2:-2:0.978
chr19	51911155	51911264	reg1001765.p1	15.950	+	TSC_hg19_v1_chr19_-_51893838 BC085012 BC143997 BC043532 NM_001193623	-17384	-	BC074916 BC074917 BC126139 AF340019 BC069430 AF340020 NM_001161748 NM_030657	-20012	-	DQ895942 EU176419 BC015759 TSC_hg19_v1_chr19_-_51875909 NM_005601 S69115	-35330	-	TSC_hg19_v1_chr19_-_51920897 AK289900 AF310233 AY358337 AK290542 AK294185 AK303514 AK303717 BC101725 BC143497 BC143500 AF301007 AK292025 AK308982 AY032685 AF311905 NM_001171156 NM_001171157 NM_001171158 NM_001171159 NM_001171160 NM_001171161 NM_033130	9739	-	AF310234 AK290412 AF195092 AF223403 BC053319 AK290149 AK295589 NM_014442	50468	-	NM_001080405	68628	+	BC085012|LOC147646|147646|uncharacterized LOC147646##BC043532|LOC147646|147646|uncharacterized LOC147646##NM_001193623|LOC147646|147646|uncharacterized LOC147646##BC074916|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC074917|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC126139|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340019|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC069430|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340020|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_001161748|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_030657|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##DQ895942|NKG7|4818|natural killer cell group 7 sequence##EU176419|NKG7|4818|natural killer cell group 7 sequence##BC015759|NKG7|4818|natural killer cell group 7 sequence##NM_005601|NKG7|4818|natural killer cell group 7 sequence##S69115|NKG7|4818|natural killer cell group 7 sequence##AK289900|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF310233|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY358337|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK290542|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK294185|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303514|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303717|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC101725|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143497|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143500|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF301007|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK292025|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK308982|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY032685|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF311905|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171156|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171157|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171158|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171159|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171160|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171161|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_033130|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF310234|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290412|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF195092|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF223403|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##BC053319|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290149|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK295589|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_014442|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_001080405|CEACAM18|729767|carcinoembryonic antigen-related cell adhesion molecule 18	0.691787	CTCF.p2:1:0.692
chr8	81143136	81143264	reg1001776.p1	15.949	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-59430	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-150171	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	-200698	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	255284	+	AK131274 NM_001033723	643815	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	881114	-	BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1	0.992064	CTCF.p2:21:0.992
chr7	155391557	155391682	reg1001396.p1	15.947	+	BC105732 BC105733 BC105734 BC107598 NM_001103176 AK094445	-65072	-	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	-140855	+	AK291675 TSC_hg19_v1_chr7_+_155089667	-301975	+	TSC_hg19_v1_chr7_-_155437101 AK091942 AX747269	45471	-	TSC_hg19_v1_chr7_+_155437147 BC011923	45532	+	TSC_hg19_v1_chr7_+_155437182 NM_053043	45589	+	BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)##BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)##NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)##AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)##BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2##AK291675|INSIG1|3638|insulin induced gene 1##BC011923|RBM33|155435|RNA binding motif protein 33##NM_053043|RBM33|155435|RNA binding motif protein 33	0.999886	CTCF.p2:-2:1.000
chr11	128500379	128500504	reg1001220.p3	15.946	+	BX640634 NM_001143820	-42989	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	-108307	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	-108478	-	TSC_hg19_v1_chr11_+_128563793 NM_001167681 NM_002017	63357	+	TSC_hg19_v1_chr11_+_128563966 AK313370	63520	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	63539	+	BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001167681|FLI1|2313|Friend leukemia virus integration 1##NM_002017|FLI1|2313|Friend leukemia virus integration 1##AK313370|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1	0.933063	CTCF.p2:12:0.933
chr2	86524646	86524757	reg1001099.p1	15.946	+	NM_016622 NM_145644 TSC_hg19_v1_chr2_+_86426604 BC020651 AK074352 AK314555 AK314577 AF208849 AL832982 CU676602	-98117	+	NM_001100169 NM_001100170 NM_006839	-101809	-	TSC_hg19_v1_chr2_-_86422614 BX537369 L42572	-102046	-	AY562239 CR457301 CU687956 AK297201 TSC_hg19_v1_chr2_-_86564750 BC064846 AK294300 AK297359 AK297373 AK299334 AK023172 NM_001164731 NM_001164732 NM_022912	40032	-	AK297287 NM_001164730	40504	-	NM_018433	143569	+	NM_016622|MRPL35|51318|mitochondrial ribosomal protein L35##NM_145644|MRPL35|51318|mitochondrial ribosomal protein L35##BC020651|MRPL35|51318|mitochondrial ribosomal protein L35##AK074352|MRPL35|51318|mitochondrial ribosomal protein L35##AK314555|MRPL35|51318|mitochondrial ribosomal protein L35##AK314577|MRPL35|51318|mitochondrial ribosomal protein L35##AF208849|MRPL35|51318|mitochondrial ribosomal protein L35##AL832982|MRPL35|51318|mitochondrial ribosomal protein L35##NM_001100169|IMMT|10989|inner membrane protein, mitochondrial##NM_001100170|IMMT|10989|inner membrane protein, mitochondrial##NM_006839|IMMT|10989|inner membrane protein, mitochondrial##BX537369|IMMT|10989|inner membrane protein, mitochondrial##L42572|IMMT|10989|inner membrane protein, mitochondrial##AY562239|REEP1|65055|receptor accessory protein 1##CR457301|REEP1|65055|receptor accessory protein 1##AK297201|REEP1|65055|receptor accessory protein 1##BC064846|REEP1|65055|receptor accessory protein 1##AK294300|REEP1|65055|receptor accessory protein 1##AK297359|REEP1|65055|receptor accessory protein 1##AK297373|REEP1|65055|receptor accessory protein 1##AK299334|REEP1|65055|receptor accessory protein 1##AK023172|REEP1|65055|receptor accessory protein 1##NM_001164731|REEP1|65055|receptor accessory protein 1##NM_001164732|REEP1|65055|receptor accessory protein 1##NM_022912|REEP1|65055|receptor accessory protein 1##AK297287|REEP1|65055|receptor accessory protein 1##NM_001164730|REEP1|65055|receptor accessory protein 1##NM_018433|KDM3A|55818|lysine (K)-specific demethylase 3A	0.0	
chr1	202540982	202541109	reg1001872.p1	15.943	+	AB588820 NM_001197131 TSC_hg19_v1_chr1_+_202509319	-31765	+	AB050641 AB050642 NM_032103 NM_032104	-109175	+	TSC_hg19_v1_chr1_+_202317826 AK307591 NM_001167857 NM_001167858 NM_002481 AB003062 AF324888 BC144699 BC110907 BC034430 BC071166	-223172	+	AK094430 NM_001136504	71535	-	BC100814 BC100815 BC100816 BC100817 AK090672 NM_177402 TSC_hg19_v1_chr1_-_202679575	138454	-	TSC_hg19_v1_chr1_-_202776401 AK122752	235399	-	AB588820|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001197131|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050641|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050642|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032103|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032104|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AK307591|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167857|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167858|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_002481|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB003062|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AF324888|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC144699|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC110907|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC034430|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC071166|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AK094430|SYT2|127833|synaptotagmin II##NM_001136504|SYT2|127833|synaptotagmin II##BC100814|SYT2|127833|synaptotagmin II##BC100815|SYT2|127833|synaptotagmin II##BC100816|SYT2|127833|synaptotagmin II##BC100817|SYT2|127833|synaptotagmin II##AK090672|SYT2|127833|synaptotagmin II##NM_177402|SYT2|127833|synaptotagmin II##AK122752|KDM5B|10765|lysine (K)-specific demethylase 5B	0.767314	CTCF.p2:11:0.767
chr17	1477852	1477969	reg1001368.p2	15.943	+	BC082976 TSC_hg19_v1_chr17_-_1466077 BC027177 D30036 M73704 BC045108 BC068538 NM_006224	-11828	-	TSC_hg19_v1_chr17_-_1420177 AK312844 NM_001135642 NM_016532 NM_130766	-57731	-	TSC_hg19_v1_chr17_-_1419907 DQ892815 DQ896061 AB529166 AK297955 AK303907 AK307293 AB036829 AB036830 AK312585 BC004362	-57944	-	AF289592 TSC_hg19_v1_chr17_-_1531711 AB120364	53730	-	TSC_hg19_v1_chr17_-_1532115 BC027923 NM_152346 BC071859	54234	-	D63483 AK310174 AB052950 AB052949 AB052947 D86864 TSC_hg19_v1_chr17_-_1549050 AK291810 AB052948 BC039735 NM_003693 NM_145350 NM_145352 AK298737	71127	-	BC082976|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC027177|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D30036|PITPNA|5306|phosphatidylinositol transfer protein, alpha##M73704|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC045108|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC068538|PITPNA|5306|phosphatidylinositol transfer protein, alpha##NM_006224|PITPNA|5306|phosphatidylinositol transfer protein, alpha##AK312844|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_001135642|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_016532|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_130766|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ892815|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ896061|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK297955|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK303907|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK307293|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036829|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036830|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312585|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC004362|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AF289592|SLC43A2|124935|solute carrier family 43, member 2##AB120364|SLC43A2|124935|solute carrier family 43, member 2##BC027923|SLC43A2|124935|solute carrier family 43, member 2##NM_152346|SLC43A2|124935|solute carrier family 43, member 2##BC071859|SLC43A2|124935|solute carrier family 43, member 2##D63483|SCARF1|8578|scavenger receptor class F, member 1##AK310174|SCARF1|8578|scavenger receptor class F, member 1##AB052950|SCARF1|8578|scavenger receptor class F, member 1##AB052949|SCARF1|8578|scavenger receptor class F, member 1##AB052947|SCARF1|8578|scavenger receptor class F, member 1##D86864|SCARF1|8578|scavenger receptor class F, member 1##AK291810|SCARF1|8578|scavenger receptor class F, member 1##AB052948|SCARF1|8578|scavenger receptor class F, member 1##BC039735|SCARF1|8578|scavenger receptor class F, member 1##NM_003693|SCARF1|8578|scavenger receptor class F, member 1##NM_145350|SCARF1|8578|scavenger receptor class F, member 1##NM_145352|SCARF1|8578|scavenger receptor class F, member 1##AK298737|SCARF1|8578|scavenger receptor class F, member 1	0.911093	CTCF.p2:1:0.911
chr17	80309814	80309939	reg1001107.p1	15.943	+	TSC_hg19_v1_chr17_-_80291903 NM_003004	-17965	-	TSC_hg19_v1_chr17_-_80291859 AK290708	-18030	-	AK312980 U77643 TSC_hg19_v1_chr17_-_80291643 AK223104	-18230	-	BC036191 NM_207459 AK093086 AX747912 BC057820 BC050391	7257	+	BC136490 NM_018949 TSC_hg19_v1_chr17_+_80332304	22354	+	TSC_hg19_v1_chr17_+_80376228 NM_173620	66366	+	NM_003004|SECTM1|6398|secreted and transmembrane 1##AK290708|SECTM1|6398|secreted and transmembrane 1##AK312980|SECTM1|6398|secreted and transmembrane 1##U77643|SECTM1|6398|secreted and transmembrane 1##AK223104|SECTM1|6398|secreted and transmembrane 1##BC036191|TEX19|400629|testis expressed 19##NM_207459|TEX19|400629|testis expressed 19##AK093086|TEX19|400629|testis expressed 19##BC057820|TEX19|400629|testis expressed 19##BC050391|TEX19|400629|testis expressed 19##BC136490|UTS2R|2837|urotensin 2 receptor##NM_018949|UTS2R|2837|urotensin 2 receptor##NM_173620|HEXDC|284004|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing	0.999253	CTCF.p2:1:0.999
chr10	129867733	129867861	reg1002029.p1	15.939	+	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	-21943	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-162342	+	TSC_hg19_v1_chr10_+_129705334 BC031078 NM_006504	-162475	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	56731	-	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	1397674	+	TSC_hg19_v1_chr10_+_131265507 BC000824	1397717	+	BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC031078|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_006504|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase	0.994765	CTCF.p2:10:0.995
chr1	156066519	156066651	reg1001296.p1	15.938	+	TSC_hg19_v1_chr1_+_156052358 AK056143	-14212	+	AY950677 NM_001093725 TSC_hg19_v1_chr1_-_156051805	-14787	-	AF274025 BC009831 NM_020387 BC033322 AF083124	-35612	+	TSC_hg19_v1_chr1_+_156084501 NM_005572 NM_170707 NM_170708 X03444 X03445 AK026584 AK122732 AY357727 BC014507 BC033088 BC000511	17908	+	TSC_hg19_v1_chr1_+_156084553 BC003162 AK130179	17966	+	TSC_hg19_v1_chr1_+_156084568 M13451	17985	+	AK056143|LMNA|4000|lamin A/C##AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)##NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)##AF274025|RAB25|57111|RAB25, member RAS oncogene family##BC009831|RAB25|57111|RAB25, member RAS oncogene family##NM_020387|RAB25|57111|RAB25, member RAS oncogene family##BC033322|RAB25|57111|RAB25, member RAS oncogene family##AF083124|RAB25|57111|RAB25, member RAS oncogene family##NM_005572|LMNA|4000|lamin A/C##NM_170707|LMNA|4000|lamin A/C##NM_170708|LMNA|4000|lamin A/C##X03444|LMNA|4000|lamin A/C##X03445|LMNA|4000|lamin A/C##AK026584|LMNA|4000|lamin A/C##AK122732|LMNA|4000|lamin A/C##AY357727|LMNA|4000|lamin A/C##BC014507|LMNA|4000|lamin A/C##BC033088|LMNA|4000|lamin A/C##BC000511|LMNA|4000|lamin A/C##BC003162|LMNA|4000|lamin A/C##AK130179|LMNA|4000|lamin A/C##M13451|LMNA|4000|lamin A/C	0.999687	CTCF.p2:-5:1.000
chr13	52470538	52470662	reg1002207.p1	15.938	+	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	-34406	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	-92325	-	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-311865	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	114950	-	TSC_hg19_v1_chr13_+_52586546 NM_001004127 BC142998 AK296747 AK092428 AX747540 BC108677 BC111022 AK025456 BC143059 BC150316	115935	+	BC073862 D87455 NM_021645	128152	+	AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)##NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)	1.133149	CTCF.p2:-2:0.992
chr2	121453303	121453433	reg1002049.p1	15.938	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-349571	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-442864	+	AK127675 AK304588 TSC_hg19_v1_chr2_+_121010450 M35416	-442924	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	101525	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	589405	-	TSC_hg19_v1_chr2_-_122159142 CR749627	705787	-	BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK127675|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK304588|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##M35416|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1	0.975317	CTCF.p2:-17:0.975
chr15	78533378	78533502	reg1001862.p1	15.934	+	DQ896428 EU176436 CU679287 BC009289 AB014531 AK294202 AK295269 AF179481 AK054882 AK299597 AK314508 NM_001199377 NM_015162	-6496	-	TSC_hg19_v1_chr15_+_78441739 U07681 AB529210 CU692430 DQ892774 DQ893529 DQ896022	-91686	+	TSC_hg19_v1_chr15_+_78441734 AK222973	-91706	+	TSC_hg19_v1_chr15_+_78556511 BC021720 NM_018602 AK098079 BX648710	23104	+	TSC_hg19_v1_chr15_+_78556901 AK096616 NM_001130182	23504	+	BC031044 NM_001130183	25100	+	DQ896428|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##EU176436|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##BC009289|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK294202|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK295269|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AF179481|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK054882|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK299597|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK314508|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##NM_001199377|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##NM_015162|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##U07681|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ892774|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ893529|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ896022|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK222973|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC021720|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_018602|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##AK098079|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##BX648710|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##AK096616|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_001130182|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##BC031044|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_001130183|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4	0.997028	CTCF.p2:19:0.997
chr22	29251736	29251856	reg1001320.p1	15.934	+	TSC_hg19_v1_chr22_+_29196668 AF086143	-55113	+	TSC_hg19_v1_chr22_-_29196555 BC012841 AK292188 AK313761 NM_001079539 NM_005080	-55229	-	BC015709 TSC_hg19_v1_chr22_-_29196526 AB463352 AM393640 CU013207 CU013495 DQ890989 DQ894165 CU674466 CR456611 AB076383 AB076384 BC000938 M31627	-55305	-	TSC_hg19_v1_chr22_+_29279579 NM_001206998 AB051436 CR456397	27981	+	AK096397 NM_032173	61580	+	TSC_hg19_v1_chr22_+_29449893 BC042614	198129	+	BC012841|XBP1|7494|X-box binding protein 1##AK292188|XBP1|7494|X-box binding protein 1##AK313761|XBP1|7494|X-box binding protein 1##NM_001079539|XBP1|7494|X-box binding protein 1##NM_005080|XBP1|7494|X-box binding protein 1##BC015709|XBP1|7494|X-box binding protein 1##AM393640|XBP1|7494|X-box binding protein 1##CU013207|XBP1|7494|X-box binding protein 1##CU013495|XBP1|7494|X-box binding protein 1##DQ890989|XBP1|7494|X-box binding protein 1##DQ894165|XBP1|7494|X-box binding protein 1##CR456611|XBP1|7494|X-box binding protein 1##AB076383|XBP1|7494|X-box binding protein 1##AB076384|XBP1|7494|X-box binding protein 1##BC000938|XBP1|7494|X-box binding protein 1##M31627|XBP1|7494|X-box binding protein 1##NM_001206998|ZNRF3|84133|zinc and ring finger 3##AB051436|ZNRF3|84133|zinc and ring finger 3##CR456397|ZNRF3|84133|zinc and ring finger 3##AK096397|ZNRF3|84133|zinc and ring finger 3##NM_032173|ZNRF3|84133|zinc and ring finger 3##BC042614|ZNRF3|84133|zinc and ring finger 3	0.680874	CTCF.p2:-14:0.681
chr7	2387752	2387872	reg1001077.p2	15.933	+	TSC_hg19_v1_chr7_-_2354077 CU692368 DQ892508 DQ895722 AK074544 AF121858 AK315670 BC021565 NM_013321	-33738	-	TSC_hg19_v1_chr7_-_2354018 BC007785	-33788	-	BC065367 AB025238 AB025239 AB025242 NM_198953 NM_198954 BC022818 BC040144 CU677071	-105279	+	TSC_hg19_v1_chr7_+_2394488 NM_001037283 NM_003751 AK302058	6650	+	TSC_hg19_v1_chr7_+_2394500 BC096753 U78525 AK300967	6690	+	TSC_hg19_v1_chr7_+_2394509 U62583	6704	+	DQ892508|SNX8|29886|sorting nexin 8##DQ895722|SNX8|29886|sorting nexin 8##AK074544|SNX8|29886|sorting nexin 8##AF121858|SNX8|29886|sorting nexin 8##AK315670|SNX8|29886|sorting nexin 8##BC021565|SNX8|29886|sorting nexin 8##NM_013321|SNX8|29886|sorting nexin 8##BC007785|SNX8|29886|sorting nexin 8##BC065367|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025238|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025239|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025242|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198953|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198954|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC022818|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC040144|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_001037283|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##NM_003751|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##AK302058|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##U78525|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##AK300967|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##U62583|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B	0.282726	CTCF.p2:0:0.283
chr14	71284509	71284672	reg1001598.p1	15.932	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-8781	-	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	-175981	+	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	-217213	-	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	89543	+	TSC_hg19_v1_chr14_+_71374441 BC140784	89861	+	AF090989 AF090990 NM_015556	711451	+	AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9##AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	0.0	
chr3	97742194	97742319	reg1001799.p1	15.932	+	TSC_hg19_v1_chr3_-_97691261 NM_001042533 NM_032778 AK027299 DQ453796 AB083192 NM_153182	-50979	-	TSC_hg19_v1_chr3_+_97540854 AK296966	-201386	+	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	-258656	+	CR749263 NM_001105580	11891	-	AB528856 NM_054106	63760	+	AB528772 NM_001005338	109284	+	NM_001042533|MINA|84864|MYC induced nuclear antigen##NM_032778|MINA|84864|MYC induced nuclear antigen##AK027299|MINA|84864|MYC induced nuclear antigen##DQ453796|MINA|84864|MYC induced nuclear antigen##AB083192|MINA|84864|MYC induced nuclear antigen##NM_153182|MINA|84864|MYC induced nuclear antigen##AK296966|CRYBG3|131544|beta-gamma crystallin domain containing 3##BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6##CR749263|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3##NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3##NM_054106|OR5AC2|81050|olfactory receptor, family 5, subfamily AC, member 2##NM_001005338|OR5H1|26341|olfactory receptor, family 5, subfamily H, member 1	0.999946	CTCF.p2:9:1.000
chr6	37534217	37534344	reg1001168.p3	15.931	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-66584	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-66628	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-130843	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	131426	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	253010	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	253410	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.038111	
chr1	27715009	27715144	reg1002415.p1	15.930	+	BC137466 AY358761 NM_207397	-5284	-	AY358081 CR456808 DQ892028 DQ895220 AK309540 AK075140 AK309576 BC020731 NM_003665 NM_173452 AY358283	-13761	-	NM_004672 TSC_hg19_v1_chr1_-_27693415	-21699	-	BC032702 NM_005281 TSC_hg19_v1_chr1_+_27719158 AK291185 AK314868	4090	+	BC001524 BC001855 AK024540 TSC_hg19_v1_chr1_-_27732180 AY007122	17108	-	TSC_hg19_v1_chr1_-_27816621 AK303011 BC032724 BC050093 BC040943	101524	-	BC137466|CD164L2|388611|CD164 sialomucin-like 2##AY358761|CD164L2|388611|CD164 sialomucin-like 2##NM_207397|CD164L2|388611|CD164 sialomucin-like 2##AY358081|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##CR456808|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##DQ892028|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##DQ895220|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AK309540|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AK075140|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##BC020731|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_003665|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_173452|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AY358283|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_004672|MAP3K6|9064|mitogen-activated protein kinase kinase kinase 6##BC032702|GPR3|2827|G protein-coupled receptor 3##NM_005281|GPR3|2827|G protein-coupled receptor 3##AK291185|GPR3|2827|G protein-coupled receptor 3##AK314868|GPR3|2827|G protein-coupled receptor 3##BC001524|WASF2|10163|WAS protein family, member 2##BC001855|WASF2|10163|WAS protein family, member 2##AK024540|WASF2|10163|WAS protein family, member 2##AY007122|WASF2|10163|WAS protein family, member 2##AK303011|WASF2|10163|WAS protein family, member 2##BC032724|WASF2|10163|WAS protein family, member 2##BC040943|WASF2|10163|WAS protein family, member 2	0.995271	CTCF.p2:0:0.995
chr9	102790534	102790645	reg1001050.p1	15.930	+	TSC_hg19_v1_chr9_+_102677458 BC101564 BC101566 BC143430 BC039048	-113129	+	TSC_hg19_v1_chr9_+_102668954 BC111009 AK000658 BC070269 AK095262 AL833620	-121588	+	AK311412 TSC_hg19_v1_chr9_+_102668952	-121637	+	AB383909 AJ344330 TSC_hg19_v1_chr9_-_102861281 AB011145 AY359048 BX648519	70613	-	TSC_hg19_v1_chr9_-_102861295 BC005374	70704	-	TSC_hg19_v1_chr9_-_102861305 AK075024 NM_015051	70732	-	BC101564|STX17|55014|syntaxin 17##BC101566|STX17|55014|syntaxin 17##BC143430|STX17|55014|syntaxin 17##BC111009|STX17|55014|syntaxin 17##AK000658|STX17|55014|syntaxin 17##BC070269|STX17|55014|syntaxin 17##AK095262|STX17|55014|syntaxin 17##AL833620|STX17|55014|syntaxin 17##AK311412|STX17|55014|syntaxin 17##AJ344330|ERP44|23071|endoplasmic reticulum protein 44##AB011145|ERP44|23071|endoplasmic reticulum protein 44##AY359048|ERP44|23071|endoplasmic reticulum protein 44##BX648519|ERP44|23071|endoplasmic reticulum protein 44##BC005374|ERP44|23071|endoplasmic reticulum protein 44##AK075024|ERP44|23071|endoplasmic reticulum protein 44##NM_015051|ERP44|23071|endoplasmic reticulum protein 44	0.498017	CTCF.p2:-6:0.498
chr15	40660407	40660519	reg1001210.p1	15.929	+	TSC_hg19_v1_chr15_+_40650431 NM_033510 AB051529 BC151833	-10041	+	TSC_hg19_v1_chr15_+_40643233 NM_001145643 BC061640	-17228	+	TSC_hg19_v1_chr15_-_40633122 AK125329 NM_207380	-27319	-	AK125765 AK301887 NM_001142761 NM_001142762 NM_033286 BC118559 BC118639 AY652615 TSC_hg19_v1_chr15_+_40675159 BC045739 BC107802 U81002 AK027408	14587	+	TSC_hg19_v1_chr15_+_40675188 AK298156 BC004543 BC014060 BC021124 BC064344	14737	+	NM_001159508 NM_002225	37222	+	NM_033510|DISP2|85455|dispatched homolog 2 (Drosophila)##AB051529|DISP2|85455|dispatched homolog 2 (Drosophila)##BC151833|DISP2|85455|dispatched homolog 2 (Drosophila)##NM_001145643|PHGR1|644844|proline/histidine/glycine-rich 1##BC061640|PHGR1|644844|proline/histidine/glycine-rich 1##AK125329|C15orf52|388115|chromosome 15 open reading frame 52##NM_207380|C15orf52|388115|chromosome 15 open reading frame 52##AK125765|C15orf23|90417|chromosome 15 open reading frame 23##AK301887|C15orf23|90417|chromosome 15 open reading frame 23##NM_001142761|C15orf23|90417|chromosome 15 open reading frame 23##NM_001142762|C15orf23|90417|chromosome 15 open reading frame 23##NM_033286|C15orf23|90417|chromosome 15 open reading frame 23##BC118559|C15orf23|90417|chromosome 15 open reading frame 23##BC118639|C15orf23|90417|chromosome 15 open reading frame 23##AY652615|C15orf23|90417|chromosome 15 open reading frame 23##BC045739|C15orf23|90417|chromosome 15 open reading frame 23##BC107802|C15orf23|90417|chromosome 15 open reading frame 23##U81002|C15orf23|90417|chromosome 15 open reading frame 23##AK027408|C15orf23|90417|chromosome 15 open reading frame 23##AK298156|C15orf23|90417|chromosome 15 open reading frame 23##BC004543|C15orf23|90417|chromosome 15 open reading frame 23##BC014060|C15orf23|90417|chromosome 15 open reading frame 23##BC021124|C15orf23|90417|chromosome 15 open reading frame 23##BC064344|C15orf23|90417|chromosome 15 open reading frame 23##NM_001159508|IVD|3712|isovaleryl-CoA dehydrogenase##NM_002225|IVD|3712|isovaleryl-CoA dehydrogenase	0.174714	
chr6	136965419	136965556	reg1001714.p1	15.929	+	NM_001198616 NM_001198617 NM_003980	-93531	-	TSC_hg19_v1_chr6_-_136871561 AJ242501 AJ242502 CU693064 AB384694 DQ890946 DQ896812 BC025777 AK312789 X73882	-93866	-	AK296483 AK311270 NM_001198614 NM_001198618 TSC_hg19_v1_chr6_-_136847745 AK311114 AK311236 AK316062 NM_001198619 AK311234	-117690	-	TSC_hg19_v1_chr6_-_137113169 AB384845	147743	-	TSC_hg19_v1_chr6_-_137113545 AK310942 D84476	148061	-	BC054503 TSC_hg19_v1_chr6_-_137113611	148123	-	NM_001198616|MAP7|9053|microtubule-associated protein 7##NM_001198617|MAP7|9053|microtubule-associated protein 7##NM_003980|MAP7|9053|microtubule-associated protein 7##AJ242501|MAP7|9053|microtubule-associated protein 7##AJ242502|MAP7|9053|microtubule-associated protein 7##DQ890946|MAP7|9053|microtubule-associated protein 7##DQ896812|MAP7|9053|microtubule-associated protein 7##BC025777|MAP7|9053|microtubule-associated protein 7##AK312789|MAP7|9053|microtubule-associated protein 7##X73882|MAP7|9053|microtubule-associated protein 7##AK296483|MAP7|9053|microtubule-associated protein 7##AK311270|MAP7|9053|microtubule-associated protein 7##NM_001198614|MAP7|9053|microtubule-associated protein 7##NM_001198618|MAP7|9053|microtubule-associated protein 7##AK311114|MAP7|9053|microtubule-associated protein 7##AK311236|MAP7|9053|microtubule-associated protein 7##AK316062|MAP7|9053|microtubule-associated protein 7##NM_001198619|MAP7|9053|microtubule-associated protein 7##AK311234|MAP7|9053|microtubule-associated protein 7##AK310942|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##D84476|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##BC054503|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5	0.544149	CTCF.p2:-16:0.544
chr15	41151465	41151581	reg1001286.p2	15.928	+	TSC_hg19_v1_chr15_+_41136676 NM_001032367 AK303899 BC004140 BT007425 CU676280 DQ890747 DQ892293 DQ895493	-14822	+	TSC_hg19_v1_chr15_+_41136245 AK314825 AK300195 NM_003710 NM_181642 BC018702 AY358969 AB000095 AY296715	-15173	+	AK000258 BC096716 BC098124 BC098150 BC098341 NM_001130143 NM_017726	-30618	-	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	14924	-	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	35177	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	70175	+	NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK000258|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC096716|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098124|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098150|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098341|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##NM_001130143|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##NM_017726|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)	0.983061	CTCF.p2:-9:0.983
chr3	192758984	192759134	reg1002098.p1	15.925	+	BC036194 BC045582 NM_178496	-123118	-	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	-123423	-	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	-313694	-	TSC_hg19_v1_chr3_+_192958897 BC048095 NM_020386	199845	+	TSC_hg19_v1_chr3_+_192959112 AB030816	200051	+	AY823163 NM_198505 AK122613	337513	-	BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##BC048095|HRASLS|57110|HRAS-like suppressor##NM_020386|HRASLS|57110|HRAS-like suppressor##AB030816|HRASLS|57110|HRAS-like suppressor##AY823163|ATP13A5|344905|ATPase type 13A5##NM_198505|ATP13A5|344905|ATPase type 13A5##AK122613|ATP13A5|344905|ATPase type 13A5	0.999199	CTCF.p2:15:0.999
chr5	140937524	140937654	reg1001905.p1	15.924	+	AL050086 TSC_hg19_v1_chr5_-_140895550	-42107	-	TSC_hg19_v1_chr5_+_140868721 BC112081 BC112083 AF152339 AF152526 NM_018929 NM_032407	-68825	+	TSC_hg19_v1_chr5_+_140864626 BC042650 AF152338 AF152525 BC101035 BC101037 BC101038 NM_018928 NM_032406 BC101036	-72905	+	AF051782 AY363395 AB384958 DQ067453 TSC_hg19_v1_chr5_-_140998497 BC117257 BC143413 BC143414	60909	-	TSC_hg19_v1_chr5_-_140998562 AB209482	60972	-	TSC_hg19_v1_chr5_-_140998564 AK304291	60975	-	AL050086|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC112081|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC112083|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152339|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152526|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_018929|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_032407|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF051782|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AY363395|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##DQ067453|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC117257|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143413|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143414|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AB209482|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AK304291|DIAPH1|1729|diaphanous homolog 1 (Drosophila)	0.987604	CTCF.p2:17:0.988
chr8	7922887	7922997	reg1001184.p1	15.924	+	AK292586 NM_001193630	-139084	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-170738	+	AF295370 AJ237673 NM_018661 AB037972 AB590071 AF217245 AF516673	-184017	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	163200	+	TSC_hg19_v1_chr8_-_8175862 AF075060	252946	-	AK122582 NM_001080826	316280	-	AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF295370|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2	0.99935	CTCF.p2:9:0.999
chr21	39591100	39591228	reg1001280.p1	15.923	+	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	-97763	-	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	-302453	-	NM_130438 NM_001396 U52373 D85759 U58496	-798544	+	BC013327 NM_002243	37499	+	D87291 NM_170736 AK292812	37765	+	NM_170737	53264	+	HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170737|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.949792	CTCF.p2:-8:0.950
chr4	15240450	15240585	reg1002076.p1	15.923	+	TSC_hg19_v1_chr4_+_15005451 AY247744 AY255519 BC103939 BC103940 BC103941 BC103942 BC105925	-235056	+	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	-236220	+	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	-236522	-	BX647781 NM_001135170 AK314802 BC022187 BC024015	101068	+	NM_001135171	135657	+	NM_031911 AF329839	189130	+	AY247744|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##AY255519|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103939|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103940|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103941|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103942|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC105925|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135171|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	0.0	
chr3	12521472	12521583	reg1000990.p2	15.921	+	TSC_hg19_v1_chr3_+_12392993 NM_015869 U79012 AB451337 AB451486 U63415 AJ563369	-128465	+	AB097931 AB107271 AB472042 NM_138711 TSC_hg19_v1_chr3_+_12330568 BC006811 AJ563370	-191055	+	TSC_hg19_v1_chr3_+_12329422 NM_005037 NM_138712 X90563 AK290581	-192071	+	NM_001145393 NM_001145394 AK225875 TSC_hg19_v1_chr3_+_12525957	4416	+	TSC_hg19_v1_chr3_+_12525987 AK074794 AK027821 NM_001145392 NM_001145395 NM_025265 BC004178 BC004211 BC019582 AK300449 AK295508	4484	+	AK291183 TSC_hg19_v1_chr3_+_12526242	4709	+	NM_015869|PPARG|5468|peroxisome proliferator-activated receptor gamma##U79012|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB451337|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB451486|PPARG|5468|peroxisome proliferator-activated receptor gamma##U63415|PPARG|5468|peroxisome proliferator-activated receptor gamma##AJ563369|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB097931|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB107271|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB472042|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138711|PPARG|5468|peroxisome proliferator-activated receptor gamma##BC006811|PPARG|5468|peroxisome proliferator-activated receptor gamma##AJ563370|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_005037|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138712|PPARG|5468|peroxisome proliferator-activated receptor gamma##X90563|PPARG|5468|peroxisome proliferator-activated receptor gamma##AK290581|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_001145393|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_001145394|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK225875|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK074794|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK027821|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_001145392|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_001145395|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_025265|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##BC004178|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##BC004211|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##BC019582|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK300449|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK295508|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK291183|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)	0.875004	CTCF.p2:10:0.875
chr8	72740293	72740439	reg1001350.p3	15.919	+	BC035138 BC048982 TSC_hg19_v1_chr8_-_72459928	-280457	-	AJ000098 NM_000503 TSC_hg19_v1_chr8_-_72274481	-465891	-	TSC_hg19_v1_chr8_-_72274302 AK307379	-466073	-	TSC_hg19_v1_chr8_+_72756330 AK123315 BC094782	15908	+	TSC_hg19_v1_chr8_+_72756336 BX647470	15974	+	TSC_hg19_v1_chr8_-_72756449 AF087036 AB463900 BT007169	16073	-	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK123315|LOC100132891|100132891|uncharacterized LOC100132891##AF087036|MSC|9242|musculin##BT007169|MSC|9242|musculin	0.951148	CTCF.p2:-43:0.951
chr12	96609056	96609210	reg1001857.p1	15.918	+	TSC_hg19_v1_chr12_+_96588254 BC017371	-20866	+	TSC_hg19_v1_chr12_+_96588154 NM_005230 Z36715 AK312694	-21007	+	AK301308 TSC_hg19_v1_chr12_-_96429399 AK310522 AK293630	-179718	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	184850	-	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	185184	-	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	691898	+	BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##NM_005230|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##Z36715|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK312694|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK301308|LTA4H|4048|leukotriene A4 hydrolase##AK293630|LTA4H|4048|leukotriene A4 hydrolase##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1	0.999232	CTCF.p2:12:0.999
chr10	33297750	33297882	reg1001288.p1	15.916	+	TSC_hg19_v1_chr10_-_33247203 NM_002211	-50579	-	TSC_hg19_v1_chr10_-_33247146 BC020057 AK291697 BX537407	-50677	-	TSC_hg19_v1_chr10_-_33246826 NM_133376	-50982	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	325637	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	325998	-	TSC_hg19_v1_chr10_-_33623996 BX648025	326182	-	NM_002211|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BC020057|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##AK291697|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BX537407|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##NM_133376|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##BX648025|NRP1|8829|neuropilin 1	0.525202	CTCF.p2:19:0.525
chr2	98207385	98207519	reg1001772.p1	15.916	+	BC071771 BC017427 TSC_hg19_v1_chr2_-_98206339 AK074570 NM_025190	-1112	-	CU687166 TSC_hg19_v1_chr2_-_98206176	-1290	-	AY358571 NM_001164315 BX647769 TSC_hg19_v1_chr2_+_97779310 AK304740 AK316541 AK307629 BC046186 BC128262 BC128517 CU692324	-428099	+	TSC_hg19_v1_chr2_+_98262533 BC006229 NM_001862 AB463554 M19961 BT006742 CR541727 CR541753 DQ890572 EU176480	55085	+	TSC_hg19_v1_chr2_-_98275064 BC025274	67628	-	TSC_hg19_v1_chr2_-_98280472 CU678694 DQ893438 DQ896748 AB528334 BC006372 X82207 BC004374 BC010090	72978	-	BC071771|ANKRD36B|57730|ankyrin repeat domain 36B##BC017427|ANKRD36B|57730|ankyrin repeat domain 36B##AK074570|ANKRD36B|57730|ankyrin repeat domain 36B##NM_025190|ANKRD36B|57730|ankyrin repeat domain 36B##AY358571|ANKRD36|375248|ankyrin repeat domain 36##NM_001164315|ANKRD36|375248|ankyrin repeat domain 36##BX647769|ANKRD36|375248|ankyrin repeat domain 36##AK304740|ANKRD36|375248|ankyrin repeat domain 36##AK316541|ANKRD36|375248|ankyrin repeat domain 36##AK307629|ANKRD36|375248|ankyrin repeat domain 36##BC046186|ANKRD36|375248|ankyrin repeat domain 36##BC128262|ANKRD36|375248|ankyrin repeat domain 36##BC128517|ANKRD36|375248|ankyrin repeat domain 36##BC006229|COX5B|1329|cytochrome c oxidase subunit Vb##NM_001862|COX5B|1329|cytochrome c oxidase subunit Vb##M19961|COX5B|1329|cytochrome c oxidase subunit Vb##BT006742|COX5B|1329|cytochrome c oxidase subunit Vb##CR541727|COX5B|1329|cytochrome c oxidase subunit Vb##CR541753|COX5B|1329|cytochrome c oxidase subunit Vb##DQ890572|COX5B|1329|cytochrome c oxidase subunit Vb##EU176480|COX5B|1329|cytochrome c oxidase subunit Vb##BC025274|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##DQ893438|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##DQ896748|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC006372|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##X82207|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC004374|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC010090|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)	1.620937	CTCF.p2:-29:0.631	CTCF.p2:29:0.990
chr8	59720602	59720730	reg1002063.p1	15.916	+	NM_003580 TSC_hg19_v1_chr8_-_59572413	-148255	-	BC041124 TSC_hg19_v1_chr8_-_59572386	-148280	-	TSC_hg19_v1_chr8_-_59572336 AK292679 AK313991	-148353	-	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	311006	-	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	1473255	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	1708774	+	NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC041124|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##AK292679|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##AK313991|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family	0.991016	CTCF.p2:-11:0.991
chr1	23823687	23823799	reg1001696.p1	15.915	+	TSC_hg19_v1_chr1_-_23810732 NM_001143778 NM_017707	-13006	-	CU687420 TSC_hg19_v1_chr1_-_23810673 AB056749 AK092291 AK295100 AX747456 AK299359 BC060786	-13077	-	AB587445 EU446905 TSC_hg19_v1_chr1_-_23751239 BC041613 AY540752 AK027024 NM_003196 AK290272 AK300707 AK310039	-72535	-	BT019523 AB463593 BC053676 AK313939 TSC_hg19_v1_chr1_-_23857464	33632	-	L22846 NM_004091	33968	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	62241	-	NM_001143778|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##NM_017707|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##AB056749|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##AK092291|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##AK295100|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##AK299359|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##BC060786|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##EU446905|TCEA3|6920|transcription elongation factor A (SII), 3##BC041613|TCEA3|6920|transcription elongation factor A (SII), 3##AY540752|TCEA3|6920|transcription elongation factor A (SII), 3##AK027024|TCEA3|6920|transcription elongation factor A (SII), 3##NM_003196|TCEA3|6920|transcription elongation factor A (SII), 3##AK290272|TCEA3|6920|transcription elongation factor A (SII), 3##AK300707|TCEA3|6920|transcription elongation factor A (SII), 3##AK310039|TCEA3|6920|transcription elongation factor A (SII), 3##BT019523|E2F2|1870|E2F transcription factor 2##BC053676|E2F2|1870|E2F transcription factor 2##AK313939|E2F2|1870|E2F transcription factor 2##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein	0.999914	CTCF.p2:-7:1.000
chr22	46041597	46041704	reg1001319.p1	15.914	+	TSC_hg19_v1_chr22_+_45898762 NM_001996 NM_006485 NM_006486 NM_006487 AK075566 AK075460 AK300806 AK316291 BC022497 AF217999 AF126110 U01244 X53741 X53742 X53743 AB528743 DQ894047	-142874	+	TSC_hg19_v1_chr22_+_45809599 BC003024 BC009904 AL442116	-232022	+	TSC_hg19_v1_chr22_+_45809579 AK098586 NM_015653 AK225722	-232081	+	NM_001167621 NM_013236 AK294348 TSC_hg19_v1_chr22_+_46067713	26045	+	TSC_hg19_v1_chr22_+_46067733 AF086923 AL050282	26079	+	AK025734 TSC_hg19_v1_chr22_+_46067746 AF119662 BC007508	26106	+	NM_001996|FBLN1|2192|fibulin 1##NM_006485|FBLN1|2192|fibulin 1##NM_006486|FBLN1|2192|fibulin 1##NM_006487|FBLN1|2192|fibulin 1##AK075566|FBLN1|2192|fibulin 1##AK075460|FBLN1|2192|fibulin 1##AK300806|FBLN1|2192|fibulin 1##AK316291|FBLN1|2192|fibulin 1##BC022497|FBLN1|2192|fibulin 1##AF217999|FBLN1|2192|fibulin 1##AF126110|FBLN1|2192|fibulin 1##U01244|FBLN1|2192|fibulin 1##X53741|FBLN1|2192|fibulin 1##X53742|FBLN1|2192|fibulin 1##X53743|FBLN1|2192|fibulin 1##DQ894047|FBLN1|2192|fibulin 1##BC003024|RIBC2|26150|RIB43A domain with coiled-coils 2##BC009904|RIBC2|26150|RIB43A domain with coiled-coils 2##AL442116|RIBC2|26150|RIB43A domain with coiled-coils 2##AK098586|RIBC2|26150|RIB43A domain with coiled-coils 2##NM_015653|RIBC2|26150|RIB43A domain with coiled-coils 2##AK225722|RIBC2|26150|RIB43A domain with coiled-coils 2##NM_001167621|ATXN10|25814|ataxin 10##NM_013236|ATXN10|25814|ataxin 10##AK294348|ATXN10|25814|ataxin 10##AF086923|ATXN10|25814|ataxin 10##AL050282|ATXN10|25814|ataxin 10##AK025734|ATXN10|25814|ataxin 10##AF119662|ATXN10|25814|ataxin 10##BC007508|ATXN10|25814|ataxin 10	0.998378	CTCF.p2:1:0.998
chr1	26137422	26137569	reg1001731.p1	15.912	+	TSC_hg19_v1_chr1_+_26126678 AJ306399 NM_020451 NM_206926	-10827	+	AB209275 TSC_hg19_v1_chr1_+_25944698	-192840	+	AF261655 NM_020379	-193537	+	TSC_hg19_v1_chr1_+_26146429 NM_001099625 NM_001099627 BX647921	8915	+	TSC_hg19_v1_chr1_+_26146468 AB075880 AK314297 AK299221 AF173891	8976	+	TSC_hg19_v1_chr1_+_26146696 AL512766 NM_019557	9170	+	AJ306399|SEPN1|57190|selenoprotein N, 1##NM_020451|SEPN1|57190|selenoprotein N, 1##NM_206926|SEPN1|57190|selenoprotein N, 1##AB209275|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_001099625|FAM54B|56181|family with sequence similarity 54, member B##NM_001099627|FAM54B|56181|family with sequence similarity 54, member B##BX647921|FAM54B|56181|family with sequence similarity 54, member B##AB075880|FAM54B|56181|family with sequence similarity 54, member B##AK314297|FAM54B|56181|family with sequence similarity 54, member B##AK299221|FAM54B|56181|family with sequence similarity 54, member B##AF173891|FAM54B|56181|family with sequence similarity 54, member B##AL512766|FAM54B|56181|family with sequence similarity 54, member B##NM_019557|FAM54B|56181|family with sequence similarity 54, member B	0.383517	CTCF.p2:-24:0.371
chr19	47930642	47930760	reg1002125.p1	15.912	+	TSC_hg19_v1_chr19_-_47922785 NM_001009813 NM_020160	-7938	-	TSC_hg19_v1_chr19_-_47922468 BC025404	-8195	-	TSC_hg19_v1_chr19_-_47922396 BC069251	-8303	-	TSC_hg19_v1_chr19_-_47975151 AK293836 AB029010 AK293860 AK293457	44446	-	TSC_hg19_v1_chr19_-_47975247 AK302552 NM_015063	44574	-	TSC_hg19_v1_chr19_-_47987466 AK298672 BC009249 AF105369 AK225419 AK023996	56741	-	NM_001009813|MEIS3|56917|Meis homeobox 3##NM_020160|MEIS3|56917|Meis homeobox 3##BC025404|MEIS3|56917|Meis homeobox 3##BC069251|MEIS3|56917|Meis homeobox 3##AK293836|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AB029010|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AK293860|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AK293457|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AK302552|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##NM_015063|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AK298672|KPTN|11133|kaptin (actin binding protein)##BC009249|KPTN|11133|kaptin (actin binding protein)##AF105369|KPTN|11133|kaptin (actin binding protein)##AK225419|KPTN|11133|kaptin (actin binding protein)##AK023996|KPTN|11133|kaptin (actin binding protein)	0.086406	
chr21	45359059	45359193	reg1001021.p4	15.911	+	AK300562 NM_001037553	-13848	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	-74003	+	TSC_hg19_v1_chr21_+_45285029 AY358704	-74066	+	TSC_hg19_v1_chr21_+_45432211 BC071569 NM_003274 U61500 BC046241 BC052247 BC094823 U19252 BC101728 AB385171 CU692332	73214	+	TSC_hg19_v1_chr21_+_45527202 AK314184	168076	+	TSC_hg19_v1_chr21_+_45527251 NM_005049	168102	+	AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC071569|TRAPPC10|7109|trafficking protein particle complex 10##NM_003274|TRAPPC10|7109|trafficking protein particle complex 10##U61500|TRAPPC10|7109|trafficking protein particle complex 10##BC046241|TRAPPC10|7109|trafficking protein particle complex 10##BC052247|TRAPPC10|7109|trafficking protein particle complex 10##BC094823|TRAPPC10|7109|trafficking protein particle complex 10##U19252|TRAPPC10|7109|trafficking protein particle complex 10##BC101728|TRAPPC10|7109|trafficking protein particle complex 10##AK314184|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##NM_005049|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)	1.195522	CTCF.p2:-18:0.995	CTCF.p2:39:0.200
chr3	18336860	18336982	reg1001801.p1	15.911	+	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-552754	-	D86965 NM_014744	-554523	-	AK310539 NM_001134381	-595410	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	129876	-	BC001744 NM_001131010	143312	-	AK295633 AY053503 NM_144633 AB209053 AK309034	853083	+	NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	0.985713	CTCF.p2:7:0.986
chr19	34269054	34269158	reg1000934.p1	15.910	+	BC018723 NM_022467	-93673	+	TSC_hg19_v1_chr19_+_34112858 NM_001127895 NM_001127896 BC014250 BC011380 AB047801	-156171	+	TSC_hg19_v1_chr19_-_34012698 BT006692 CR541669 CU677179 DQ891114 DQ894294 BC004305 BC028295 AK225037 AK290756 J04605 AK293126 AK290781 AK291561 AK294619 BC015027 NM_000285 NM_001166056 NM_001166057	-256394	-	TSC_hg19_v1_chr19_+_34287743 NM_001129994 NM_001129995 NM_024076 AK027901 AK291465 BC001185 BC009335 AK225793 AK294543	18630	+	TSC_hg19_v1_chr19_+_34663327 BC016842 NM_001114093 NM_015578	394225	+	TSC_hg19_v1_chr19_+_34663429 AK300208	394320	+	BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127895|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127896|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC014250|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC011380|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##AB047801|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BT006692|PEPD|5184|peptidase D##CR541669|PEPD|5184|peptidase D##DQ891114|PEPD|5184|peptidase D##DQ894294|PEPD|5184|peptidase D##BC004305|PEPD|5184|peptidase D##BC028295|PEPD|5184|peptidase D##AK225037|PEPD|5184|peptidase D##AK290756|PEPD|5184|peptidase D##J04605|PEPD|5184|peptidase D##AK293126|PEPD|5184|peptidase D##AK290781|PEPD|5184|peptidase D##AK291561|PEPD|5184|peptidase D##AK294619|PEPD|5184|peptidase D##BC015027|PEPD|5184|peptidase D##NM_000285|PEPD|5184|peptidase D##NM_001166056|PEPD|5184|peptidase D##NM_001166057|PEPD|5184|peptidase D##NM_001129994|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_001129995|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_024076|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK027901|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK291465|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC001185|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC009335|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK225793|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK294543|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC016842|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_001114093|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_015578|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK300208|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)	1.729484	CTCF.p2:-18:0.732	CTCF.p2:39:0.998
chr19	9736601	9736740	reg1002259.p1	15.910	+	TSC_hg19_v1_chr19_+_9732192 NM_001242812 BC036632 AK097685 BC143540	-4494	+	AK122974 BC032668 AK293004 AK304383 NM_152289	-4771	-	AK025435 TSC_hg19_v1_chr19_-_9695178 AK297919 NM_001008727	-41481	-	TSC_hg19_v1_chr19_-_9785743 AK000086	49060	-	TSC_hg19_v1_chr19_-_9785777 AK300115 AK297446 AK303038 AK304370 NM_001130031 NM_001130032 NM_017656	49098	-	AK296815 NM_001199814	74801	-	NM_001242812|LOC284385|284385|uncharacterized LOC284385##AK097685|LOC284385|284385|uncharacterized LOC284385##BC143540|LOC284385|284385|uncharacterized LOC284385##AK122974|ZNF561|93134|zinc finger protein 561##BC032668|ZNF561|93134|zinc finger protein 561##AK293004|ZNF561|93134|zinc finger protein 561##AK304383|ZNF561|93134|zinc finger protein 561##NM_152289|ZNF561|93134|zinc finger protein 561##AK297919|ZNF121|7675|zinc finger protein 121##NM_001008727|ZNF121|7675|zinc finger protein 121##AK000086|ZNF562|54811|zinc finger protein 562##AK300115|ZNF562|54811|zinc finger protein 562##AK297446|ZNF562|54811|zinc finger protein 562##AK303038|ZNF562|54811|zinc finger protein 562##AK304370|ZNF562|54811|zinc finger protein 562##NM_001130031|ZNF562|54811|zinc finger protein 562##NM_001130032|ZNF562|54811|zinc finger protein 562##NM_017656|ZNF562|54811|zinc finger protein 562##AK296815|ZNF812|729648|zinc finger protein 812##NM_001199814|ZNF812|729648|zinc finger protein 812	0.91208	CTCF.p2:1:0.912
chr2	128407418	128407554	reg1002175.p1	15.909	+	NM_001161415 NM_001161416 NM_001161417 NM_005291 AK292725 BX538082 BC013202 Z94154 Y12546 BC031653	-3888	+	TSC_hg19_v1_chr2_+_128293312 NM_001080527	-114142	+	BC065279 BC110536 BC110537 TSC_hg19_v1_chr2_-_128284054 AK000868 AL834178 AK296848 AK027561 AK295970 AK309006 AK056881 AK294669 NM_017969	-123521	-	AB463832 AF527767 AK094954 AF527764 NM_017980	14579	-	AK022470 AK000906 TSC_hg19_v1_chr2_-_128432682 BC065816 AF527765 NM_001136037 NM_001161403	25216	-	TSC_hg19_v1_chr2_-_128433340 AK297645 AK095790	25931	-	NM_001161415|GPR17|2840|G protein-coupled receptor 17##NM_001161416|GPR17|2840|G protein-coupled receptor 17##NM_001161417|GPR17|2840|G protein-coupled receptor 17##NM_005291|GPR17|2840|G protein-coupled receptor 17##AK292725|GPR17|2840|G protein-coupled receptor 17##BX538082|GPR17|2840|G protein-coupled receptor 17##BC013202|GPR17|2840|G protein-coupled receptor 17##Z94154|GPR17|2840|G protein-coupled receptor 17##Y12546|GPR17|2840|G protein-coupled receptor 17##BC031653|GPR17|2840|G protein-coupled receptor 17##NM_001080527|MYO7B|4648|myosin VIIB##BC065279|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110536|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110537|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK000868|IWS1|55677|IWS1 homolog (S. cerevisiae)##AL834178|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK296848|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK027561|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK295970|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK309006|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK056881|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK294669|IWS1|55677|IWS1 homolog (S. cerevisiae)##NM_017969|IWS1|55677|IWS1 homolog (S. cerevisiae)##AF527767|LIMS2|55679|LIM and senescent cell antigen-like domains 2##AK094954|LIMS2|55679|LIM and senescent cell antigen-like domains 2##AF527764|LIMS2|55679|LIM and senescent cell antigen-like domains 2##NM_017980|LIMS2|55679|LIM and senescent cell antigen-like domains 2##AK022470|LIMS2|55679|LIM and senescent cell antigen-like domains 2##AK000906|LIMS2|55679|LIM and senescent cell antigen-like domains 2##BC065816|LIMS2|55679|LIM and senescent cell antigen-like domains 2##AF527765|LIMS2|55679|LIM and senescent cell antigen-like domains 2##NM_001136037|LIMS2|55679|LIM and senescent cell antigen-like domains 2##NM_001161403|LIMS2|55679|LIM and senescent cell antigen-like domains 2##AK297645|LIMS2|55679|LIM and senescent cell antigen-like domains 2##AK095790|LIMS2|55679|LIM and senescent cell antigen-like domains 2	0.999798	CTCF.p2:6:1.000
chr17	81153285	81153465	reg1000083.p1	15.907	+	TSC_hg19_v1_chr17_+_81037508 BC082252 NM_001004431 BC118558 BC118638	-115833	+	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	-143706	-	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	-146905	-	None	None	None	None	None	None	None	None	None	BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like##NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1	2.931006	CTCF.p2:-14:0.977	CTCF.p2:53:0.977	CTCF.p2:-82:0.977
chr11	6337160	6337293	reg1002104.p1	15.904	+	NM_176875 D13305 S70057 L07746 AK292064 AK226020 BC000740 AK314266 AB527993 AF239668 Y13464 DQ890577 DQ893737 AF441129 AY029770 AY322551 BT006789 L04473 L08112	-56196	+	NM_001037329 AK122736	-76901	+	TSC_hg19_v1_chr11_-_6255892 AK056468 NM_001098794 NM_032127	-81305	-	DQ892300 DQ895499 BC038387 TSC_hg19_v1_chr11_-_6341732 BC011585 NM_145040 AF339881	4507	-	TSC_hg19_v1_chr11_+_6411681 NM_000543 NM_001007593 AB209775 AK292388 X59960 BC041164 M59916 AY649987 HQ132745 HQ132746 HQ132747 HQ132748	74506	+	TSC_hg19_v1_chr11_-_6440299 AK293452 AF394214 L77864 NM_001164 AK293613 AK294495 AK311725	103097	-	NM_176875|CCKBR|887|cholecystokinin B receptor##D13305|CCKBR|887|cholecystokinin B receptor##S70057|CCKBR|887|cholecystokinin B receptor##L07746|CCKBR|887|cholecystokinin B receptor##AK292064|CCKBR|887|cholecystokinin B receptor##AK226020|CCKBR|887|cholecystokinin B receptor##BC000740|CCKBR|887|cholecystokinin B receptor##AK314266|CCKBR|887|cholecystokinin B receptor##AF239668|CCKBR|887|cholecystokinin B receptor##DQ890577|CCKBR|887|cholecystokinin B receptor##DQ893737|CCKBR|887|cholecystokinin B receptor##AF441129|CCKBR|887|cholecystokinin B receptor##AY029770|CCKBR|887|cholecystokinin B receptor##AY322551|CCKBR|887|cholecystokinin B receptor##BT006789|CCKBR|887|cholecystokinin B receptor##L04473|CCKBR|887|cholecystokinin B receptor##L08112|CCKBR|887|cholecystokinin B receptor##NM_001037329|CNGA4|1262|cyclic nucleotide gated channel alpha 4##AK122736|CNGA4|1262|cyclic nucleotide gated channel alpha 4##AK056468|FAM160A2|84067|family with sequence similarity 160, member A2##NM_001098794|FAM160A2|84067|family with sequence similarity 160, member A2##NM_032127|FAM160A2|84067|family with sequence similarity 160, member A2##DQ892300|PRKCDBP|112464|protein kinase C, delta binding protein##DQ895499|PRKCDBP|112464|protein kinase C, delta binding protein##BC038387|PRKCDBP|112464|protein kinase C, delta binding protein##BC011585|PRKCDBP|112464|protein kinase C, delta binding protein##NM_145040|PRKCDBP|112464|protein kinase C, delta binding protein##AF339881|PRKCDBP|112464|protein kinase C, delta binding protein##NM_000543|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##NM_001007593|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AB209775|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK292388|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##X59960|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##BC041164|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##M59916|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AY649987|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132745|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132746|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132747|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132748|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK293452|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AF394214|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##L77864|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_001164|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK293613|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK294495|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK311725|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)	0.032961	
chr1	28535476	28535611	reg1001733.p1	15.904	+	S52624 AK292053 NM_001164721 NM_001164722	-15131	-	NM_000952 NM_001164723	-32089	-	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-120419	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	23988	-	TSC_hg19_v1_chr1_+_28562634 NM_016311 NM_178190 NM_178191 AK316600 BC009677 AK000934 AB029042 BT009849 CR457097 EU832478 EU832558 BC017562 BC004955	27106	+	TSC_hg19_v1_chr1_+_28586034 NM_031459 BC013304 AY123223 BC033719 AL136551 AK315710 DQ892827 DQ896073 EU831582 EU831667 AB529110 CU680558	50615	+	S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_016311|ATPIF1|93974|ATPase inhibitory factor 1##NM_178190|ATPIF1|93974|ATPase inhibitory factor 1##NM_178191|ATPIF1|93974|ATPase inhibitory factor 1##AK316600|ATPIF1|93974|ATPase inhibitory factor 1##BC009677|ATPIF1|93974|ATPase inhibitory factor 1##AK000934|ATPIF1|93974|ATPase inhibitory factor 1##AB029042|ATPIF1|93974|ATPase inhibitory factor 1##BT009849|ATPIF1|93974|ATPase inhibitory factor 1##CR457097|ATPIF1|93974|ATPase inhibitory factor 1##EU832478|ATPIF1|93974|ATPase inhibitory factor 1##EU832558|ATPIF1|93974|ATPase inhibitory factor 1##BC017562|ATPIF1|93974|ATPase inhibitory factor 1##BC004955|ATPIF1|93974|ATPase inhibitory factor 1##NM_031459|SESN2|83667|sestrin 2##BC013304|SESN2|83667|sestrin 2##AY123223|SESN2|83667|sestrin 2##BC033719|SESN2|83667|sestrin 2##AL136551|SESN2|83667|sestrin 2##AK315710|SESN2|83667|sestrin 2##DQ892827|SESN2|83667|sestrin 2##DQ896073|SESN2|83667|sestrin 2##EU831582|SESN2|83667|sestrin 2##EU831667|SESN2|83667|sestrin 2	0.980957	CTCF.p2:21:0.981
chr2	111148072	111148200	reg1001873.p1	15.903	+	TSC_hg19_v1_chr2_-_110970123 BC031315	-178015	-	AJ001815 BC032939 TSC_hg19_v1_chr2_-_110962582 BX571745 NM_000272 NM_001128178 NM_001128179 NM_207181	-185529	-	AF023674 CU679489 BC062574 TSC_hg19_v1_chr2_-_110962561 BC009789 AK299011 AK225600 AK307654	-185581	-	BC094740 NM_001205288 NM_033514	82515	-	NM_005054 U64675	186541	-	AL136868 NM_001037866 NM_001123363 NM_032260	188172	-	BC031315|LINC00116|205251|long intergenic non-protein coding RNA 116##AJ001815|NPHP1|4867|nephronophthisis 1 (juvenile)##BC032939|NPHP1|4867|nephronophthisis 1 (juvenile)##BX571745|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_000272|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128178|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128179|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_207181|NPHP1|4867|nephronophthisis 1 (juvenile)##AF023674|NPHP1|4867|nephronophthisis 1 (juvenile)##BC062574|NPHP1|4867|nephronophthisis 1 (juvenile)##BC009789|NPHP1|4867|nephronophthisis 1 (juvenile)##AK299011|NPHP1|4867|nephronophthisis 1 (juvenile)##AK225600|NPHP1|4867|nephronophthisis 1 (juvenile)##AK307654|NPHP1|4867|nephronophthisis 1 (juvenile)##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5	0.994818	CTCF.p2:-12:0.995
chr1	160221836	160221970	reg1001500.p2	15.898	+	TSC_hg19_v1_chr1_+_160175173 AK311762 AK095879 X86809 BC002426 Y13736	-46706	+	TSC_hg19_v1_chr1_+_160175124 NM_003768 BC022554	-46774	+	NM_001231 AK300713 AK313250 BC022289 S73775	-61557	+	BC111063 BC013107 TSC_hg19_v1_chr1_-_160232242 AK026481 AK312690 CR749801	10325	-	TSC_hg19_v1_chr1_-_160232278 AK303188	10373	-	TSC_hg19_v1_chr1_-_160232340 NM_015726	10434	-	AK311762|PEA15|8682|phosphoprotein enriched in astrocytes 15##AK095879|PEA15|8682|phosphoprotein enriched in astrocytes 15##X86809|PEA15|8682|phosphoprotein enriched in astrocytes 15##BC002426|PEA15|8682|phosphoprotein enriched in astrocytes 15##Y13736|PEA15|8682|phosphoprotein enriched in astrocytes 15##NM_003768|PEA15|8682|phosphoprotein enriched in astrocytes 15##BC022554|PEA15|8682|phosphoprotein enriched in astrocytes 15##NM_001231|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##AK300713|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##AK313250|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##BC022289|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##S73775|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##BC111063|DCAF8|50717|DDB1 and CUL4 associated factor 8##BC013107|DCAF8|50717|DDB1 and CUL4 associated factor 8##AK026481|DCAF8|50717|DDB1 and CUL4 associated factor 8##AK312690|DCAF8|50717|DDB1 and CUL4 associated factor 8##CR749801|DCAF8|50717|DDB1 and CUL4 associated factor 8##AK303188|DCAF8|50717|DDB1 and CUL4 associated factor 8##NM_015726|DCAF8|50717|DDB1 and CUL4 associated factor 8	0.748334	CTCF.p2:9:0.748
chr3	67164375	67164491	reg1001662.p1	15.898	+	NM_032505 AK096640 AK300397	-115705	+	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	-612969	-	AF381545 BC140907 NM_015541 AY730707	-613581	-	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	540629	-	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	540717	+	AY325114 NM_001252216	876300	+	NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AY325114|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##NM_001252216|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1	0.991231	CTCF.p2:8:0.991
chr10	98832735	98832871	reg1002119.p1	15.896	+	AK126886 BC024315 NM_015652 CU692918	-91736	+	TSC_hg19_v1_chr10_+_98592758 NM_032440 AL834245 AB058698	-240075	+	TSC_hg19_v1_chr10_-_98592186 AB593180	-240603	-	AY029183 AB383997 TSC_hg19_v1_chr10_-_98945570	112671	-	TSC_hg19_v1_chr10_-_98945606 BC146851	112792	-	AB017167 TSC_hg19_v1_chr10_-_98945702 BC028105 AB011537 BC146761 NM_003061 BC139909	112882	-	AK126886|C10orf12|26148|chromosome 10 open reading frame 12##BC024315|C10orf12|26148|chromosome 10 open reading frame 12##NM_015652|C10orf12|26148|chromosome 10 open reading frame 12##NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor##AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor##AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor##AY029183|SLIT1|6585|slit homolog 1 (Drosophila)##BC146851|SLIT1|6585|slit homolog 1 (Drosophila)##AB017167|SLIT1|6585|slit homolog 1 (Drosophila)##BC028105|SLIT1|6585|slit homolog 1 (Drosophila)##AB011537|SLIT1|6585|slit homolog 1 (Drosophila)##BC146761|SLIT1|6585|slit homolog 1 (Drosophila)##NM_003061|SLIT1|6585|slit homolog 1 (Drosophila)##BC139909|SLIT1|6585|slit homolog 1 (Drosophila)	0.990672	CTCF.p2:-13:0.991
chr20	48545318	48545438	reg1001892.p1	15.896	+	TSC_hg19_v1_chr20_-_48532067 AK295536 NM_006038	-13305	-	TSC_hg19_v1_chr20_-_48532056 U28164	-13331	-	BC009481 AB018300 TSC_hg19_v1_chr20_-_48532030 AK023229	-13368	-	TSC_hg19_v1_chr20_+_48552913 AK091976 AK297188 NM_018683	7536	+	TSC_hg19_v1_chr20_+_48552933 AK315638	7553	+	BX640603 TSC_hg19_v1_chr20_+_48552935 BC066919 AF265215 AK301731 BC013695 AB587558 BT006795	7565	+	AK295536|SPATA2|9825|spermatogenesis associated 2##NM_006038|SPATA2|9825|spermatogenesis associated 2##U28164|SPATA2|9825|spermatogenesis associated 2##BC009481|SPATA2|9825|spermatogenesis associated 2##AB018300|SPATA2|9825|spermatogenesis associated 2##AK023229|SPATA2|9825|spermatogenesis associated 2##AK091976|RNF114|55905|ring finger protein 114##AK297188|RNF114|55905|ring finger protein 114##NM_018683|RNF114|55905|ring finger protein 114##AK315638|RNF114|55905|ring finger protein 114##BX640603|RNF114|55905|ring finger protein 114##BC066919|RNF114|55905|ring finger protein 114##AF265215|RNF114|55905|ring finger protein 114##AK301731|RNF114|55905|ring finger protein 114##BC013695|RNF114|55905|ring finger protein 114##BT006795|RNF114|55905|ring finger protein 114	0.290345	CTCF.p2:3:0.290
chr20	20840953	20841091	reg1002376.p1	15.889	+	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	-147794	-	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	-492268	+	NM_001167816 AL117439	-803702	+	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	265642	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	265705	+	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	442953	+	DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1##BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2	0.993342	CTCF.p2:1:0.993
chr7	76266487	76266627	reg1002197.p1	15.889	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-10010	-	TSC_hg19_v1_chr7_-_76256148 BC017101	-10354	-	TSC_hg19_v1_chr7_+_76178675 BC078169	-87882	+	BC036053 NM_020879 BX649000 AK292491 HM370402	485389	+	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	562579	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	779161	-	BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC017101|POMZP3|22932|POM121 and ZP3 fusion##BC078169|LOC100133091|100133091|uncharacterized LOC100133091##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)	0.999541	CTCF.p2:-9:1.000
chr3	12176679	12176809	reg1001830.p1	15.888	+	TSC_hg19_v1_chr3_+_12045861 NM_003178 NM_133625 AK094464 BC051307 AB209088 U40215 AF077671 AF077737	-130841	+	EU832515 EU832596 AK295839 TSC_hg19_v1_chr3_-_11888358 AK310993 BC015088 NM_138807 AK092776 AX747723 AK309733 AK303598	-288485	-	TSC_hg19_v1_chr3_-_11762012 D50911 BC001514 AK130542 BC000763 BC003038 NM_014667	-414629	-	BT019627 CU679743 DQ891795 DQ894978 U76456 TSC_hg19_v1_chr3_-_12200413 AK313018	23635	-	BC010553 NM_003256	24106	-	TSC_hg19_v1_chr3_+_12329422 NM_005037 NM_138712 X90563 AK290581	152712	+	NM_003178|SYN2|6854|synapsin II##NM_133625|SYN2|6854|synapsin II##AK094464|SYN2|6854|synapsin II##BC051307|SYN2|6854|synapsin II##AB209088|SYN2|6854|synapsin II##U40215|SYN2|6854|synapsin II##AF077671|SYN2|6854|synapsin II##AF077737|SYN2|6854|synapsin II##EU832515|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##EU832596|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK295839|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK310993|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##BC015088|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_138807|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK092776|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK309733|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK303598|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##D50911|VGLL4|9686|vestigial like 4 (Drosophila)##BC001514|VGLL4|9686|vestigial like 4 (Drosophila)##AK130542|VGLL4|9686|vestigial like 4 (Drosophila)##BC000763|VGLL4|9686|vestigial like 4 (Drosophila)##BC003038|VGLL4|9686|vestigial like 4 (Drosophila)##NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)##BT019627|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ891795|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ894978|TIMP4|7079|TIMP metallopeptidase inhibitor 4##U76456|TIMP4|7079|TIMP metallopeptidase inhibitor 4##AK313018|TIMP4|7079|TIMP metallopeptidase inhibitor 4##BC010553|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_003256|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_005037|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138712|PPARG|5468|peroxisome proliferator-activated receptor gamma##X90563|PPARG|5468|peroxisome proliferator-activated receptor gamma##AK290581|PPARG|5468|peroxisome proliferator-activated receptor gamma	0.957741	CTCF.p2:-19:0.958
chr2	174075443	174075575	reg1002008.p1	15.887	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	-134861	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	-134963	+	AB208974 TSC_hg19_v1_chr2_+_173940455	-135061	+	TSC_hg19_v1_chr2_+_174219599 AY029179 NM_031942 NM_145810 AK027642 AK027628 BC027966 AK075134 AK297097 AK300949 AK297245 AL834186 CU693352 AB527763	144104	+	AK023489 TSC_hg19_v1_chr2_-_174767427	691845	-	X68560 TSC_hg19_v1_chr2_-_174828559 M97191	753038	-	AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AB208974|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AY029179|CDCA7|83879|cell division cycle associated 7##NM_031942|CDCA7|83879|cell division cycle associated 7##NM_145810|CDCA7|83879|cell division cycle associated 7##AK027642|CDCA7|83879|cell division cycle associated 7##AK027628|CDCA7|83879|cell division cycle associated 7##BC027966|CDCA7|83879|cell division cycle associated 7##AK075134|CDCA7|83879|cell division cycle associated 7##AK297097|CDCA7|83879|cell division cycle associated 7##AK300949|CDCA7|83879|cell division cycle associated 7##AK297245|CDCA7|83879|cell division cycle associated 7##AL834186|CDCA7|83879|cell division cycle associated 7##X68560|SP3|6670|Sp3 transcription factor##M97191|SP3|6670|Sp3 transcription factor	0.211385	CTCF.p2:4:0.211
chr3	159721450	159721584	reg1002429.p1	15.887	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	-14785	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	-163658	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	-163824	+	TSC_hg19_v1_chr3_+_159943306 NM_001168214	221820	+	BC031660 TSC_hg19_v1_chr3_+_159943777	222186	+	AB037795 NM_001190242	379981	-	NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80##BC031660|C3orf80|401097|chromosome 3 open reading frame 80##AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	0.976983	CTCF.p2:-5:0.977
chr4	53411748	53411889	reg1002325.p1	15.886	+	TSC_hg19_v1_chr4_+_52917480 AK304386 AK057468 BC025396 NM_145263 AK314799	-494285	+	BT019433 CR456810 DQ893140 DQ896425 EU176433 U29586 TSC_hg19_v1_chr4_-_52904447 AK299765 BC020709 AK289892 U31116 NM_000232	-507361	-	CR749811 NM_001024611	-528033	-	AK302438 NM_001134223	110939	-	DQ896764 EU176797 GU455414 AK022614 TSC_hg19_v1_chr4_-_53525461 AK299883 BC037574 AK024318 AK296493 NM_022832	113591	-	TSC_hg19_v1_chr4_+_53578670 BC045566 BC015222 D28589	166846	+	AK304386|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK057468|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BC025396|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##NM_145263|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK314799|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BT019433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR456810|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ893140|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ896425|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##EU176433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U29586|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK299765|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##BC020709|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK289892|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U31116|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##NM_000232|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR749811|LRRC66|339977|leucine rich repeat containing 66##NM_001024611|LRRC66|339977|leucine rich repeat containing 66##AK302438|USP46|64854|ubiquitin specific peptidase 46##NM_001134223|USP46|64854|ubiquitin specific peptidase 46##DQ896764|USP46|64854|ubiquitin specific peptidase 46##EU176797|USP46|64854|ubiquitin specific peptidase 46##GU455414|USP46|64854|ubiquitin specific peptidase 46##AK022614|USP46|64854|ubiquitin specific peptidase 46##AK299883|USP46|64854|ubiquitin specific peptidase 46##BC037574|USP46|64854|ubiquitin specific peptidase 46##AK024318|USP46|64854|ubiquitin specific peptidase 46##AK296493|USP46|64854|ubiquitin specific peptidase 46##NM_022832|USP46|64854|ubiquitin specific peptidase 46##BC045566|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)##BC015222|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)##D28589|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)	0.774116	CTCF.p2:-15:0.774
chr3	141280402	141280519	reg1001810.p1	15.882	+	TSC_hg19_v1_chr3_+_141205882 AK292016 AK301015 AF115573 D78155 D82880 NM_006506	-74589	+	AK311479 TSC_hg19_v1_chr3_+_141105293	-175172	+	TSC_hg19_v1_chr3_+_141087345 AK311501	-193103	+	TSC_hg19_v1_chr3_+_141457045 NM_001201370 NM_014245 NM_183237	176609	+	TSC_hg19_v1_chr3_+_141457129 AK311982	176660	+	TSC_hg19_v1_chr3_+_141457160 BC008627 BC005966 DQ891759 DQ894943 AB590187 AF092878 AF142060 AF312226 AK289894 BT007348	176700	+	AK292016|RASA2|5922|RAS p21 protein activator 2##AK301015|RASA2|5922|RAS p21 protein activator 2##AF115573|RASA2|5922|RAS p21 protein activator 2##D78155|RASA2|5922|RAS p21 protein activator 2##D82880|RASA2|5922|RAS p21 protein activator 2##NM_006506|RASA2|5922|RAS p21 protein activator 2##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001201370|RNF7|9616|ring finger protein 7##NM_014245|RNF7|9616|ring finger protein 7##NM_183237|RNF7|9616|ring finger protein 7##AK311982|RNF7|9616|ring finger protein 7##BC008627|RNF7|9616|ring finger protein 7##BC005966|RNF7|9616|ring finger protein 7##DQ891759|RNF7|9616|ring finger protein 7##DQ894943|RNF7|9616|ring finger protein 7##AF092878|RNF7|9616|ring finger protein 7##AF142060|RNF7|9616|ring finger protein 7##AF312226|RNF7|9616|ring finger protein 7##BT007348|RNF7|9616|ring finger protein 7	0.011061	
chr8	101839340	101839468	reg1001923.p1	15.882	+	BC041863 TSC_hg19_v1_chr8_-_101734972	-104438	-	Y00345 TSC_hg19_v1_chr8_-_101734316 AK130523 AK303120 NM_002568	-105087	-	BC015958 BC023217 BC023520 TSC_hg19_v1_chr8_-_101734301	-105109	-	TSC_hg19_v1_chr8_-_101936525 DQ185048	97120	-	TSC_hg19_v1_chr8_-_101962797 NM_001135702	123395	-	TSC_hg19_v1_chr8_-_101963538 NM_001135700 NM_001135701	124058	-	BC041863|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##Y00345|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK130523|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK303120|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##NM_002568|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC015958|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023217|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023520|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ185048|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135702|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135700|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135701|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	0.997669	CTCF.p2:9:0.998
chr11	34380889	34381055	reg1001075.p1	15.881	+	TSC_hg19_v1_chr11_-_34379556 AK291744 NM_145804	-1417	-	TSC_hg19_v1_chr11_+_34127208 AK294044 AL136882 AK001636 BC014440 BC020205	-253722	+	NM_001144030 NM_024662 TSC_hg19_v1_chr11_+_34127175 AK022241 AK225341 BC035558 AB051496	-253815	+	TSC_hg19_v1_chr11_+_34460487 AK291585 NM_001752 BC110398 AK315350 X04076 BC112217 BC112219	79502	+	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	79577	+	AB528439 AK290817 AF115402 NM_001243081 NM_198381	152259	-	AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##AK294044|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AL136882|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK001636|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC014440|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC020205|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_001144030|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_024662|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK022241|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK225341|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC035558|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AB051496|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK291585|CAT|847|catalase##NM_001752|CAT|847|catalase##BC110398|CAT|847|catalase##AK315350|CAT|847|catalase##X04076|CAT|847|catalase##BC112217|CAT|847|catalase##BC112219|CAT|847|catalase##AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase##AK290817|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115402|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243081|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_198381|ELF5|2001|E74-like factor 5 (ets domain transcription factor)	0.0	
chr12	27006831	27006937	reg1001481.p1	15.881	+	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	-20804	-	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-658299	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-658593	+	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	84025	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	84346	-	NM_001171887 NM_001171888 NM_015633 AK001534 TSC_hg19_v1_chr12_+_27091402 BC032143 AF161472	84491	+	AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_001171887|FGFR1OP2|26127|FGFR1 oncogene partner 2##NM_001171888|FGFR1OP2|26127|FGFR1 oncogene partner 2##NM_015633|FGFR1OP2|26127|FGFR1 oncogene partner 2##AK001534|FGFR1OP2|26127|FGFR1 oncogene partner 2##BC032143|FGFR1OP2|26127|FGFR1 oncogene partner 2##AF161472|FGFR1OP2|26127|FGFR1 oncogene partner 2	0.956345	CTCF.p2:-2:0.956
chr8	37709073	37709208	reg1001154.p1	15.880	+	NM_018310 TSC_hg19_v1_chr8_-_37707430 AK294337	-1696	-	TSC_hg19_v1_chr8_-_37707395 AK315420 BC010648 AK001914 AF206673	-1754	-	AB463449 CU679783 EU446514 AF298153 TSC_hg19_v1_chr8_-_37707359	-1811	-	TSC_hg19_v1_chr8_-_37727937 AK026177	18810	-	AY280968 DQ083995 AF368294 DQ236342 BC077720 BC054881 TSC_hg19_v1_chr8_-_37757016 AK291781 AK026275 NM_001002814 NM_025151	47861	-	BC029504 NM_152413	88506	-	NM_018310|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK294337|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK315420|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##BC010648|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK001914|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AF206673|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##EU446514|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AF298153|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK026177|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AY280968|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ083995|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AF368294|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ236342|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC077720|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC054881|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK291781|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK026275|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_001002814|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_025151|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC029504|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##NM_152413|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1	0.993442	CTCF.p2:-9:0.993
chr11	65236436	65236574	reg1001415.p1	15.879	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	-42982	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	-44105	+	TSC_hg19_v1_chr11_+_65190274 AK026198	-46227	+	TSC_hg19_v1_chr11_+_65265158 EF177381	28698	+	TSC_hg19_v1_chr11_+_65266515 BC025986 BX538238 FJ209305	29996	+	TSC_hg19_v1_chr11_+_65266869 BC104662	30294	+	AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##EF177381|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BC025986|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BX538238|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)	0.267342	CTCF.p2:9:0.240
chr11	62328121	62328255	reg1002238.p1	15.878	+	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	-13874	-	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	-13952	-	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	-141652	+	DQ185040 BT006677 CR407625 BC006509 BC006520 CU674184 CU677463 CU680700 BC000384 DQ891103 DQ894284 Z11531 AB527934 BC009865 BC015813 BC018857 BC018853 BC028179 TSC_hg19_v1_chr11_-_62341334 BC013918 AK092787 AK299876 AY542307 BC067738 AK129569 AK129618 AK300729 X63526 AK130026 AK300686 BC031012	13136	-	TSC_hg19_v1_chr11_-_62341364 NM_001404	13215	-	TSC_hg19_v1_chr11_+_62341675 AK125351	13478	+	AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ185040|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BT006677|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##CR407625|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006509|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006520|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC000384|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ891103|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ894284|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##Z11531|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC009865|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC015813|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018857|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018853|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC028179|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC013918|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK092787|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK299876|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AY542307|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC067738|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129569|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129618|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300729|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##X63526|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK130026|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300686|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC031012|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##NM_001404|EEF1G|1937|eukaryotic translation elongation factor 1 gamma	0.984656	CTCF.p2:11:0.985
chr6	150255419	150255564	reg1001297.p1	15.878	+	AY172580 BC096719 BC098152 AY172579 NM_001001788 AK310157	-11291	-	AY359075 NM_001243328	-38297	-	AY054974 AY176317 AY252119 EF489426 AF359243 BC101976 BC103694 AY069961 NM_001243325 NM_001243327 NM_139165	-43389	-	AK299895 AB052906 NM_025217 TSC_hg19_v1_chr6_+_150263162 AX772820 BC034689 AY358665 AF304378 AY026825 CU689938	7673	+	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	29671	+	BC131600 AB528849 AY039682 NM_130900	91142	-	AY172580|RAET1G|353091|retinoic acid early transcript 1G##BC096719|RAET1G|353091|retinoic acid early transcript 1G##BC098152|RAET1G|353091|retinoic acid early transcript 1G##AY172579|RAET1G|353091|retinoic acid early transcript 1G##NM_001001788|RAET1G|353091|retinoic acid early transcript 1G##AK310157|RAET1G|353091|retinoic acid early transcript 1G##AY359075|RAET1E|135250|retinoic acid early transcript 1E##NM_001243328|RAET1E|135250|retinoic acid early transcript 1E##AY054974|RAET1E|135250|retinoic acid early transcript 1E##AY176317|RAET1E|135250|retinoic acid early transcript 1E##AY252119|RAET1E|135250|retinoic acid early transcript 1E##EF489426|RAET1E|135250|retinoic acid early transcript 1E##AF359243|RAET1E|135250|retinoic acid early transcript 1E##BC101976|RAET1E|135250|retinoic acid early transcript 1E##BC103694|RAET1E|135250|retinoic acid early transcript 1E##AY069961|RAET1E|135250|retinoic acid early transcript 1E##NM_001243325|RAET1E|135250|retinoic acid early transcript 1E##NM_001243327|RAET1E|135250|retinoic acid early transcript 1E##NM_139165|RAET1E|135250|retinoic acid early transcript 1E##AK299895|ULBP2|80328|UL16 binding protein 2##AB052906|ULBP2|80328|UL16 binding protein 2##NM_025217|ULBP2|80328|UL16 binding protein 2##AX772820|ULBP2|80328|UL16 binding protein 2##BC034689|ULBP2|80328|UL16 binding protein 2##AY358665|ULBP2|80328|UL16 binding protein 2##AF304378|ULBP2|80328|UL16 binding protein 2##AY026825|ULBP2|80328|UL16 binding protein 2##AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L	0.99981	CTCF.p2:-11:1.000
chr19	7717023	7717152	reg1000705.p1	15.874	+	AB002559 U63533 TSC_hg19_v1_chr19_+_7702028 AK302257 AB464275 BT006915	-15060	+	TSC_hg19_v1_chr19_+_7702012 BC002869	-15075	+	TSC_hg19_v1_chr19_+_7701995 NM_001127396 NM_006949 AK303701 AK314230 AK222967 AK222977	-15095	+	AF290874 AF323081 AY207314 BC069302 NM_001193374 NM_020415 TSC_hg19_v1_chr19_+_7733975 BC101554 BC101560 AF205952 AY359066	16895	+	TSC_hg19_v1_chr19_+_7741975 BC104796 BC104798 NM_174918 AF461156 BC035847	24880	+	NM_001042462 TSC_hg19_v1_chr19_+_7745726 AK292001	28630	+	AB002559|STXBP2|6813|syntaxin binding protein 2##U63533|STXBP2|6813|syntaxin binding protein 2##AK302257|STXBP2|6813|syntaxin binding protein 2##BT006915|STXBP2|6813|syntaxin binding protein 2##BC002869|STXBP2|6813|syntaxin binding protein 2##NM_001127396|STXBP2|6813|syntaxin binding protein 2##NM_006949|STXBP2|6813|syntaxin binding protein 2##AK303701|STXBP2|6813|syntaxin binding protein 2##AK314230|STXBP2|6813|syntaxin binding protein 2##AK222967|STXBP2|6813|syntaxin binding protein 2##AK222977|STXBP2|6813|syntaxin binding protein 2##AF290874|RETN|56729|resistin##AF323081|RETN|56729|resistin##AY207314|RETN|56729|resistin##BC069302|RETN|56729|resistin##NM_001193374|RETN|56729|resistin##NM_020415|RETN|56729|resistin##BC101554|RETN|56729|resistin##BC101560|RETN|56729|resistin##AF205952|RETN|56729|resistin##AY359066|RETN|56729|resistin##BC104796|C19orf59|199675|chromosome 19 open reading frame 59##BC104798|C19orf59|199675|chromosome 19 open reading frame 59##NM_174918|C19orf59|199675|chromosome 19 open reading frame 59##AF461156|C19orf59|199675|chromosome 19 open reading frame 59##BC035847|C19orf59|199675|chromosome 19 open reading frame 59##NM_001042462|TRAPPC5|126003|trafficking protein particle complex 5##AK292001|TRAPPC5|126003|trafficking protein particle complex 5	0.951029	CTCF.p2:-6:0.951
chr11	15122778	15122904	reg1001979.p1	15.873	+	BC008428 AK291188 BC092468 NM_000728	-27715	+	M26095 X03662 M64486 BC093753 BC101599 BC143562 BC069684 BC069704 BC069760 BC069778 NM_001033952 NM_001033953 NM_001741 X00356	-129021	-	AK054728 TSC_hg19_v1_chr11_+_14926557	-196292	+	AB236159 NM_001031853	11128	+	AB236158 NM_001042536	13642	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	1301560	-	BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##M26095|CALCA|796|calcitonin-related polypeptide alpha##X03662|CALCA|796|calcitonin-related polypeptide alpha##M64486|CALCA|796|calcitonin-related polypeptide alpha##BC093753|CALCA|796|calcitonin-related polypeptide alpha##BC101599|CALCA|796|calcitonin-related polypeptide alpha##BC143562|CALCA|796|calcitonin-related polypeptide alpha##BC069684|CALCA|796|calcitonin-related polypeptide alpha##BC069704|CALCA|796|calcitonin-related polypeptide alpha##BC069760|CALCA|796|calcitonin-related polypeptide alpha##BC069778|CALCA|796|calcitonin-related polypeptide alpha##NM_001033952|CALCA|796|calcitonin-related polypeptide alpha##NM_001033953|CALCA|796|calcitonin-related polypeptide alpha##NM_001741|CALCA|796|calcitonin-related polypeptide alpha##X00356|CALCA|796|calcitonin-related polypeptide alpha##AK054728|CALCB|797|calcitonin-related polypeptide beta##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6	0.997146	CTCF.p2:-6:0.997
chr15	57598927	57599047	reg1001090.p1	15.873	+	TSC_hg19_v1_chr15_+_57511630 AK294991 AK304007 AK311359 AK308101 NM_207040 BX537967 AM393573	-87320	+	TSC_hg19_v1_chr15_+_57210977 M83233	-387987	+	TSC_hg19_v1_chr15_+_57210901 BC050556 BC051769 M80627	-388085	+	AK056673 AK307410 NM_001252335 NM_032866 TSC_hg19_v1_chr15_+_57668732 AY274808 BC030995 AY610514	69730	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	285178	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	399899	+	AK294991|TCF12|6938|transcription factor 12##AK304007|TCF12|6938|transcription factor 12##AK311359|TCF12|6938|transcription factor 12##AK308101|TCF12|6938|transcription factor 12##NM_207040|TCF12|6938|transcription factor 12##BX537967|TCF12|6938|transcription factor 12##AM393573|TCF12|6938|transcription factor 12##M83233|TCF12|6938|transcription factor 12##BC050556|TCF12|6938|transcription factor 12##BC051769|TCF12|6938|transcription factor 12##M80627|TCF12|6938|transcription factor 12##AK056673|CGNL1|84952|cingulin-like 1##AK307410|CGNL1|84952|cingulin-like 1##NM_001252335|CGNL1|84952|cingulin-like 1##NM_032866|CGNL1|84952|cingulin-like 1##AY274808|CGNL1|84952|cingulin-like 1##BC030995|CGNL1|84952|cingulin-like 1##AY610514|CGNL1|84952|cingulin-like 1##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M	0.990359	CTCF.p2:18:0.990
chr12	32465120	32465273	reg1001993.p1	15.872	+	AK313430 AK290188 NM_001003398 NM_001714 U90028 BC136372 TSC_hg19_v1_chr12_+_32260263	-205023	+	TSC_hg19_v1_chr12_+_32259750 BC010091	-205482	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	-352802	+	BC039708 BC063403 NM_139241 BC096746 AK057294 BC045552	189843	+	TSC_hg19_v1_chr12_+_32687260 AK303334	222067	+	TSC_hg19_v1_chr12_+_32832187 AK302565 NM_005690 NM_012062 NM_012063 AK311606	366961	+	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)##U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK303334|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK302565|DNM1L|10059|dynamin 1-like##NM_005690|DNM1L|10059|dynamin 1-like##NM_012062|DNM1L|10059|dynamin 1-like##NM_012063|DNM1L|10059|dynamin 1-like##AK311606|DNM1L|10059|dynamin 1-like	0.999362	CTCF.p2:-8:0.999
chr2	25050588	25050727	reg1002336.p1	15.872	+	NM_001199803 AK027859 TSC_hg19_v1_chr2_+_25016332 NM_024322 BC002870 AK315483	-34386	+	TSC_hg19_v1_chr2_-_25016225 CU687260 BC073803 NM_001013663	-34419	-	NM_003743 NM_147223 NM_147233 AJ000881 AJ000882 U59302	-243280	+	HQ258684 AK027857 BC126235 BC144119 AF033861 NM_004036 AK122926	91300	-	AK294726 TSC_hg19_v1_chr2_-_25194607	143888	-	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	144210	-	NM_001199803|CENPO|79172|centromere protein O##AK027859|CENPO|79172|centromere protein O##NM_024322|CENPO|79172|centromere protein O##BC002870|CENPO|79172|centromere protein O##AK315483|CENPO|79172|centromere protein O##BC073803|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001013663|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_003743|NCOA1|8648|nuclear receptor coactivator 1##NM_147223|NCOA1|8648|nuclear receptor coactivator 1##NM_147233|NCOA1|8648|nuclear receptor coactivator 1##AJ000881|NCOA1|8648|nuclear receptor coactivator 1##AJ000882|NCOA1|8648|nuclear receptor coactivator 1##U59302|NCOA1|8648|nuclear receptor coactivator 1##HQ258684|ADCY3|109|adenylate cyclase 3##AK027857|ADCY3|109|adenylate cyclase 3##BC126235|ADCY3|109|adenylate cyclase 3##BC144119|ADCY3|109|adenylate cyclase 3##AF033861|ADCY3|109|adenylate cyclase 3##NM_004036|ADCY3|109|adenylate cyclase 3##AK122926|ADCY3|109|adenylate cyclase 3##AK294726|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27	0.029967	
chr6	65040912	65041047	reg1001938.p1	15.872	+	AF091622 BC113650 BC113652 NM_015153 D87685 AB385299	-684537	+	TSC_hg19_v1_chr6_+_64346027 BX648268 AK290491	-694962	+	TSC_hg19_v1_chr6_+_64345729 AK315868 AK298580	-695156	+	AY358133 NM_198283 AK310478	1248726	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	1376114	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	3558049	-	AF091622|PHF3|23469|PHD finger protein 3##BC113650|PHF3|23469|PHD finger protein 3##BC113652|PHF3|23469|PHD finger protein 3##NM_015153|PHF3|23469|PHD finger protein 3##D87685|PHF3|23469|PHD finger protein 3##BX648268|PHF3|23469|PHD finger protein 3##AK290491|PHF3|23469|PHD finger protein 3##AK315868|PHF3|23469|PHD finger protein 3##AK298580|PHF3|23469|PHD finger protein 3##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3	0.997126	CTCF.p2:9:0.997
chr3	149198314	149198423	reg1001136.p2	15.870	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-5879	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-5966	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-102826	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	177367	-	AK022036 NM_001168278	222691	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	271871	-	AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2	0.807241	CTCF.p2:15:0.807
chr9	137035999	137036111	reg1001668.p1	15.869	+	AJ011376 NM_052821 AB464354	-31101	+	AK000552 TSC_hg19_v1_chr9_+_137001248 AK025810	-34806	+	TSC_hg19_v1_chr9_+_137001223 BC001635	-34830	+	TSC_hg19_v1_chr9_+_137218317 BC063827 NM_002957	182260	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	182345	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	497592	+	AJ011376|WDR5|11091|WD repeat domain 5##NM_052821|WDR5|11091|WD repeat domain 5##AK000552|WDR5|11091|WD repeat domain 5##AK025810|WDR5|11091|WD repeat domain 5##BC001635|WDR5|11091|WD repeat domain 5##BC063827|RXRA|6256|retinoid X receptor, alpha##NM_002957|RXRA|6256|retinoid X receptor, alpha##BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1	0.998614	CTCF.p2:-9:0.999
chr16	29733034	29733152	reg1001492.p1	15.866	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-42611	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-42699	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-58079	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	24208	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	56493	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	68958	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.033375	
chr17	42287826	42287947	reg1001443.p2	15.866	+	TSC_hg19_v1_chr17_-_42277350 AK296689	-10501	-	BC037418 HQ258188 TSC_hg19_v1_chr17_-_42275499 BC113595 BC126113 NM_001098833 NM_020218	-12410	-	TSC_hg19_v1_chr17_+_42264588 AF370373	-23269	+	AK291733 TSC_hg19_v1_chr17_-_42296871	8992	-	X56687 TSC_hg19_v1_chr17_-_42296940	9046	-	TSC_hg19_v1_chr17_-_42297051 NM_001076684 NM_014233	9158	-	AK296689|ATXN7L3|56970|ataxin 7-like 3##BC037418|ATXN7L3|56970|ataxin 7-like 3##HQ258188|ATXN7L3|56970|ataxin 7-like 3##BC113595|ATXN7L3|56970|ataxin 7-like 3##BC126113|ATXN7L3|56970|ataxin 7-like 3##NM_001098833|ATXN7L3|56970|ataxin 7-like 3##NM_020218|ATXN7L3|56970|ataxin 7-like 3##AF370373|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2##AK291733|UBTF|7343|upstream binding transcription factor, RNA polymerase I##X56687|UBTF|7343|upstream binding transcription factor, RNA polymerase I##NM_001076684|UBTF|7343|upstream binding transcription factor, RNA polymerase I##NM_014233|UBTF|7343|upstream binding transcription factor, RNA polymerase I	0.416177	CTCF.p2:-3:0.416
chr12	122607839	122607982	reg1001391.p1	15.865	+	TSC_hg19_v1_chr12_+_122516682 AF312918	-91193	+	TSC_hg19_v1_chr12_+_122516655 BC151841 NM_014938	-91303	+	AK296159 TSC_hg19_v1_chr12_+_122459903 NM_001024808 NM_020993 AK316486 BC113627 BC094723 HQ258124 AB590498	-148017	+	BC069272 TSC_hg19_v1_chr12_+_122614551	6610	+	AK124107 NM_152759	44355	+	AB590927 BC132998 BC133000 AY499343 NM_001014336	50824	-	AF312918|MLXIP|22877|MLX interacting protein##BC151841|MLXIP|22877|MLX interacting protein##NM_014938|MLXIP|22877|MLX interacting protein##AK296159|BCL7A|605|B-cell CLL/lymphoma 7A##NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A##NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A##AK316486|BCL7A|605|B-cell CLL/lymphoma 7A##BC113627|BCL7A|605|B-cell CLL/lymphoma 7A##BC094723|BCL7A|605|B-cell CLL/lymphoma 7A##HQ258124|BCL7A|605|B-cell CLL/lymphoma 7A##BC069272|MLXIP|22877|MLX interacting protein##AK124107|LRRC43|254050|leucine rich repeat containing 43##NM_152759|LRRC43|254050|leucine rich repeat containing 43##BC132998|IL31|386653|interleukin 31##BC133000|IL31|386653|interleukin 31##AY499343|IL31|386653|interleukin 31##NM_001014336|IL31|386653|interleukin 31	0.987022	CTCF.p2:18:0.987
chr1	35916786	35916913	reg1002210.p1	15.864	+	BX648067 TSC_hg19_v1_chr1_+_35851133	-65732	+	TSC_hg19_v1_chr1_+_35734624 BC127113 BC127114 AB587559	-182221	+	TSC_hg19_v1_chr1_+_35734567 AK308320 NM_005095	-182287	+	TSC_hg19_v1_chr1_-_35920081 AK090878	3309	-	TSC_hg19_v1_chr1_-_36022989 BC014530 AF275679 AK314605 AY163234	106120	-	AK316252 TSC_hg19_v1_chr1_-_36023002	106154	-	BX648067|ZMYM4|9202|zinc finger, MYM-type 4##BC127113|ZMYM4|9202|zinc finger, MYM-type 4##BC127114|ZMYM4|9202|zinc finger, MYM-type 4##AK308320|ZMYM4|9202|zinc finger, MYM-type 4##NM_005095|ZMYM4|9202|zinc finger, MYM-type 4##AK090878|KIAA0319L|79932|KIAA0319-like##BC014530|KIAA0319L|79932|KIAA0319-like##AF275679|KIAA0319L|79932|KIAA0319-like##AK314605|KIAA0319L|79932|KIAA0319-like##AY163234|KIAA0319L|79932|KIAA0319-like##AK316252|KIAA0319L|79932|KIAA0319-like	0.728118	CTCF.p2:-3:0.728
chr15	33993017	33993144	reg1002228.p1	15.863	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	-389911	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-632845	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-981914	-	TSC_hg19_v1_chr15_-_34212524 BC037796	219478	-	AK095198 NM_012125	268008	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	338232	-	AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor	0.95733	CTCF.p2:8:0.957
chr11	34018670	34018790	reg1001570.p1	15.860	+	NM_005574 X61118	-104895	-	TSC_hg19_v1_chr11_-_33891485 NM_001142315	-127234	-	BC042426 TSC_hg19_v1_chr11_-_33891402 BC034041 NM_001142316	-127339	-	TSC_hg19_v1_chr11_+_34073238 BC001731 NM_005898 NM_203364	54483	+	TSC_hg19_v1_chr11_+_34073889 AK299720	55174	+	TSC_hg19_v1_chr11_+_34073950 Z48042	55207	+	NM_005574|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##X61118|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142315|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC042426|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC034041|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142316|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC001731|CAPRIN1|4076|cell cycle associated protein 1##NM_005898|CAPRIN1|4076|cell cycle associated protein 1##NM_203364|CAPRIN1|4076|cell cycle associated protein 1##AK299720|CAPRIN1|4076|cell cycle associated protein 1##Z48042|CAPRIN1|4076|cell cycle associated protein 1	0.991791	CTCF.p2:-5:0.992
chr11	61515268	61515393	reg1002192.p1	15.859	+	TSC_hg19_v1_chr11_+_61447896 BC150176 BC150195 NM_006133 AB014559 BC152453	-67449	+	TSC_hg19_v1_chr11_-_61348549 BC125170 BC125171 NM_001252065 NM_004200	-166803	-	NM_001145077	-239059	+	TSC_hg19_v1_chr11_+_61520107 AB023171 NM_001127392 AB385408	4777	+	AF086762 NM_013279	7530	+	TSC_hg19_v1_chr11_-_61560064 BC002750 AF085986 AK291683 AF086763 BC015968 AF070661 NM_014206	44740	-	BC150176|DAGLA|747|diacylglycerol lipase, alpha##BC150195|DAGLA|747|diacylglycerol lipase, alpha##NM_006133|DAGLA|747|diacylglycerol lipase, alpha##AB014559|DAGLA|747|diacylglycerol lipase, alpha##BC152453|DAGLA|747|diacylglycerol lipase, alpha##BC125170|SYT7|9066|synaptotagmin VII##BC125171|SYT7|9066|synaptotagmin VII##NM_001252065|SYT7|9066|synaptotagmin VII##NM_004200|SYT7|9066|synaptotagmin VII##NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B##AB023171|C11orf9|745|chromosome 11 open reading frame 9##NM_001127392|C11orf9|745|chromosome 11 open reading frame 9##AF086762|C11orf9|745|chromosome 11 open reading frame 9##NM_013279|C11orf9|745|chromosome 11 open reading frame 9##BC002750|C11orf10|746|chromosome 11 open reading frame 10##AF085986|C11orf10|746|chromosome 11 open reading frame 10##AK291683|C11orf10|746|chromosome 11 open reading frame 10##AF086763|C11orf10|746|chromosome 11 open reading frame 10##BC015968|C11orf10|746|chromosome 11 open reading frame 10##AF070661|C11orf10|746|chromosome 11 open reading frame 10##NM_014206|C11orf10|746|chromosome 11 open reading frame 10	0.943211	CTCF.p2:0:0.943
chr5	53813370	53813491	reg1001556.p1	15.858	+	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	-61906	+	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	-207028	-	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	-207105	-	TSC_hg19_v1_chr5_+_53813588 AK304195 NM_001145427 BC060791 BC067860 NM_001102575 NM_052870	115	+	TSC_hg19_v1_chr5_+_53813656 BC117218 BC117220	243	+	TSC_hg19_v1_chr5_+_53813761 AF395536	341	+	AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3##AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AK304195|SNX18|112574|sorting nexin 18##NM_001145427|SNX18|112574|sorting nexin 18##BC060791|SNX18|112574|sorting nexin 18##BC067860|SNX18|112574|sorting nexin 18##NM_001102575|SNX18|112574|sorting nexin 18##NM_052870|SNX18|112574|sorting nexin 18##BC117218|SNX18|112574|sorting nexin 18##BC117220|SNX18|112574|sorting nexin 18##AF395536|SNX18|112574|sorting nexin 18	0.999735	CTCF.p2:-9:1.000
chr8	27181377	27181506	reg1000967.p1	15.856	+	NM_004103 D45853 U43522	-1518	+	TSC_hg19_v1_chr8_+_27169015 BC036651 NM_173174	-12440	+	TSC_hg19_v1_chr8_-_27168793 AB029021 AF492463 BC018337 NM_171982	-12633	-	NM_173176 TSC_hg19_v1_chr8_+_27183022	1576	+	TSC_hg19_v1_chr8_+_27183049 BC042599	1611	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	1636	+	NM_004103|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##D45853|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##U43522|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC036651|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173174|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB029021|TRIM35|23087|tripartite motif containing 35##AF492463|TRIM35|23087|tripartite motif containing 35##BC018337|TRIM35|23087|tripartite motif containing 35##NM_171982|TRIM35|23087|tripartite motif containing 35##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta	0.066622	
chr1	167035989	167036124	reg1001827.p1	15.855	+	TSC_hg19_v1_chr1_+_166958503 AK302253 AK131066 DQ076156 GU383113 AK027810 NM_032858 BC028595 AB590622 CU688524	-77514	+	TSC_hg19_v1_chr1_+_166944753 GU383114	-91272	+	AB527117 AF503509 NM_199351 TSC_hg19_v1_chr1_-_166944658	-91374	-	CU687006 BC074830 BC074876 TSC_hg19_v1_chr1_-_167059615 BC107164 BC107165 AK312833 BC069705 BC069723 BC069745 BC069761 BC069789 NM_005814 U79725	23639	-	NM_001080426	28030	+	TSC_hg19_v1_chr1_+_167190127 NM_001198786 NM_002697 AK302525 AK303201 AK308004 AK091438 S66901 BC052274 X13403	154001	+	AK302253|MAEL|84944|maelstrom homolog (Drosophila)##AK131066|MAEL|84944|maelstrom homolog (Drosophila)##DQ076156|MAEL|84944|maelstrom homolog (Drosophila)##GU383113|MAEL|84944|maelstrom homolog (Drosophila)##AK027810|MAEL|84944|maelstrom homolog (Drosophila)##NM_032858|MAEL|84944|maelstrom homolog (Drosophila)##BC028595|MAEL|84944|maelstrom homolog (Drosophila)##GU383114|MAEL|84944|maelstrom homolog (Drosophila)##AF503509|ILDR2|387597|immunoglobulin-like domain containing receptor 2##NM_199351|ILDR2|387597|immunoglobulin-like domain containing receptor 2##BC074830|GPA33|10223|glycoprotein A33 (transmembrane)##BC074876|GPA33|10223|glycoprotein A33 (transmembrane)##BC107164|GPA33|10223|glycoprotein A33 (transmembrane)##BC107165|GPA33|10223|glycoprotein A33 (transmembrane)##AK312833|GPA33|10223|glycoprotein A33 (transmembrane)##BC069705|GPA33|10223|glycoprotein A33 (transmembrane)##BC069723|GPA33|10223|glycoprotein A33 (transmembrane)##BC069745|GPA33|10223|glycoprotein A33 (transmembrane)##BC069761|GPA33|10223|glycoprotein A33 (transmembrane)##BC069789|GPA33|10223|glycoprotein A33 (transmembrane)##NM_005814|GPA33|10223|glycoprotein A33 (transmembrane)##U79725|GPA33|10223|glycoprotein A33 (transmembrane)##NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)##NM_001198786|POU2F1|5451|POU class 2 homeobox 1##NM_002697|POU2F1|5451|POU class 2 homeobox 1##AK302525|POU2F1|5451|POU class 2 homeobox 1##AK303201|POU2F1|5451|POU class 2 homeobox 1##AK308004|POU2F1|5451|POU class 2 homeobox 1##AK091438|POU2F1|5451|POU class 2 homeobox 1##BC052274|POU2F1|5451|POU class 2 homeobox 1##X13403|POU2F1|5451|POU class 2 homeobox 1	0.093692	
chr21	46712487	46712633	reg1002028.p1	15.854	+	TSC_hg19_v1_chr21_+_46707955 BC022830 BC033767	-4585	+	TSC_hg19_v1_chr21_-_46707808 BC064623 AJ575591 AL110285 AB023175 AJ302079 AJ302080 AY066015 AK294966 AK290732 AK298080 NM_015227 NM_133635	-4759	-	TSC_hg19_v1_chr21_+_46572480 FJ169506	-140062	+	TSC_hg19_v1_chr21_+_46825079 AK130835 AF018082 NM_130445 BC063833	112508	+	AB590554 TSC_hg19_v1_chr21_+_46825311	112741	+	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	162858	+	BC022830|LOC642852|642852|uncharacterized LOC642852##BC033767|LOC642852|642852|uncharacterized LOC642852##BC064623|POFUT2|23275|protein O-fucosyltransferase 2##AJ575591|POFUT2|23275|protein O-fucosyltransferase 2##AL110285|POFUT2|23275|protein O-fucosyltransferase 2##AB023175|POFUT2|23275|protein O-fucosyltransferase 2##AJ302079|POFUT2|23275|protein O-fucosyltransferase 2##AJ302080|POFUT2|23275|protein O-fucosyltransferase 2##AY066015|POFUT2|23275|protein O-fucosyltransferase 2##AK294966|POFUT2|23275|protein O-fucosyltransferase 2##AK290732|POFUT2|23275|protein O-fucosyltransferase 2##AK298080|POFUT2|23275|protein O-fucosyltransferase 2##NM_015227|POFUT2|23275|protein O-fucosyltransferase 2##NM_133635|POFUT2|23275|protein O-fucosyltransferase 2##FJ169506|ADARB1|104|adenosine deaminase, RNA-specific, B1##AK130835|COL18A1|80781|collagen, type XVIII, alpha 1##AF018082|COL18A1|80781|collagen, type XVIII, alpha 1##NM_130445|COL18A1|80781|collagen, type XVIII, alpha 1##BC063833|COL18A1|80781|collagen, type XVIII, alpha 1##AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1	1.05958	CTCF.p2:-2:0.979
chr3	185701423	185701559	reg1001273.p1	15.851	+	TSC_hg19_v1_chr3_-_185655843 AK315632 NM_001243879 NM_004593	-45613	-	TSC_hg19_v1_chr3_-_185655809 AK098191	-45676	-	TSC_hg19_v1_chr3_-_185655803 BC000451 BC000160 U87836 AK308267	-45701	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	124855	-	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	125365	-	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	378443	-	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC000451|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC000160|TRA2B|6434|transformer 2 beta homolog (Drosophila)##U87836|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK308267|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa	0.999156	CTCF.p2:-1:0.999
chr11	126586481	126586606	reg1002034.p1	15.850	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	-310545	+	NM_006278 X74570	-360448	+	TSC_hg19_v1_chr11_-_126225452 AK096370	-361080	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	284117	-	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	284182	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	286762	+	AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK096370|FLJ39051|399972|uncharacterized LOC399972##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)	0.893947	CTCF.p2:-7:0.894
chr13	30082407	30082533	reg1001638.p1	15.850	+	AK301633 TSC_hg19_v1_chr13_+_30070532	-11963	+	BC032481 NM_015233 AK293970 BC119654 BC119655 BC129985	-79660	+	BC150245 AB018317 NM_001033602 AB384524	-483695	+	X59155 X57303 TSC_hg19_v1_chr13_-_30169595 AK312818 BC063303	87151	-	TSC_hg19_v1_chr13_-_30169826 NM_003045	87350	-	AK307361 AM393248 AM393364 CR533458 AF044221 AL080177 AK311846 TSC_hg19_v1_chr13_-_30423999	341329	-	AK301633|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC150245|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AB018317|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_001033602|MTUS2|23281|microtubule associated tumor suppressor candidate 2##X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##NM_003045|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK307361|UBL3|5412|ubiquitin-like 3##AM393248|UBL3|5412|ubiquitin-like 3##AM393364|UBL3|5412|ubiquitin-like 3##CR533458|UBL3|5412|ubiquitin-like 3##AF044221|UBL3|5412|ubiquitin-like 3##AL080177|UBL3|5412|ubiquitin-like 3##AK311846|UBL3|5412|ubiquitin-like 3	0.999628	CTCF.p2:-15:1.000
chr1	41788674	41788740	reg1002504.p2	15.846	+	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-80871	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-80922	-	BC021252 NM_001172221	-160019	-	BC034393 X55177 M65199 NM_001956	161612	-	TSC_hg19_v1_chr1_-_42384357 BC040942	595635	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	595666	-	BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC021252|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172221|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.941606	CTCF.p2:29:0.942
chr20	33126573	33126703	reg1001505.p1	15.846	+	TSC_hg19_v1_chr20_+_33104226 NM_014183 AF132750 BC002481 AF161511 AK294214 AF165516	-22422	+	TSC_hg19_v1_chr20_+_32951078 NM_031483 AK297809 AK304090 AK315212 BC011571 AB056663	-175546	+	AK097610 NM_001161766	-227031	-	NM_181509	8053	+	TSC_hg19_v1_chr20_+_33146525 NM_032514 AF276658 BC015810 AL833855 AB528175 BT007452 DQ893641 DQ895536 AM392590	19948	+	AK301900 AY339061 BC030512 EU831773 EU831851 TSC_hg19_v1_chr20_-_33264897 AB086842 AK308627 AK075507 AY358816	138272	-	NM_014183|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF132750|DYNLRB1|83658|dynein, light chain, roadblock-type 1##BC002481|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF161511|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AK294214|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF165516|DYNLRB1|83658|dynein, light chain, roadblock-type 1##NM_031483|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK297809|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK304090|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK315212|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##BC011571|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AB056663|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK097610|AHCY|191|adenosylhomocysteinase##NM_001161766|AHCY|191|adenosylhomocysteinase##NM_181509|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##NM_032514|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AF276658|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##BC015810|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AL833855|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##BT007452|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##DQ893641|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##DQ895536|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AM392590|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AK301900|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AY339061|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##BC030512|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##EU831773|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##EU831851|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AB086842|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AK308627|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AK075507|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AY358816|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	0.991574	CTCF.p2:3:0.992
chr14	96240791	96240891	reg1000808.p1	15.844	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-60374	-	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	-88063	+	TSC_hg19_v1_chr14_+_96001402 DQ083331	-239408	+	AK023027 TSC_hg19_v1_chr14_+_96342762	101904	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	264805	+	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	430236	+	CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##DQ083331|GLRX5|51218|glutaredoxin 5##AK023027|LOC100507043|100507043|uncharacterized LOC100507043##NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2	0.623295	CTCF.p2:10:0.623
chr22	31485243	31485384	reg1001855.p1	15.840	+	AK128627 AK295418 NM_001207018 TSC_hg19_v1_chr22_+_31481009	-4312	+	AK304084 NM_001207017 TSC_hg19_v1_chr22_+_31478895	-6441	+	TSC_hg19_v1_chr22_+_31477303 NM_006932 NM_134269 NM_134270 AK128719 AF064238 AJ010306 AY061971 AY061972 Y13492 AK096953 AK293681 BC034237 AK300854	-8031	+	TSC_hg19_v1_chr22_+_31487319 AK301289 AK307627 AK225648 Z49989	2011	+	AK092684 AX747671 TSC_hg19_v1_chr22_+_31489351 AK095930 AK300064 AK309502 AK095916	4041	+	TSC_hg19_v1_chr22_-_31503490 CU680602 BC013421 BC030236 BC042299 BC068004 NM_080430 AK308582	18219	-	AK128627|SMTN|6525|smoothelin##AK295418|SMTN|6525|smoothelin##NM_001207018|SMTN|6525|smoothelin##AK304084|SMTN|6525|smoothelin##NM_001207017|SMTN|6525|smoothelin##NM_006932|SMTN|6525|smoothelin##NM_134269|SMTN|6525|smoothelin##NM_134270|SMTN|6525|smoothelin##AK128719|SMTN|6525|smoothelin##AF064238|SMTN|6525|smoothelin##AJ010306|SMTN|6525|smoothelin##AY061971|SMTN|6525|smoothelin##AY061972|SMTN|6525|smoothelin##Y13492|SMTN|6525|smoothelin##AK096953|SMTN|6525|smoothelin##AK293681|SMTN|6525|smoothelin##BC034237|SMTN|6525|smoothelin##AK300854|SMTN|6525|smoothelin##AK301289|SMTN|6525|smoothelin##AK307627|SMTN|6525|smoothelin##AK225648|SMTN|6525|smoothelin##Z49989|SMTN|6525|smoothelin##AK092684|SMTN|6525|smoothelin##AK095930|SMTN|6525|smoothelin##AK300064|SMTN|6525|smoothelin##AK309502|SMTN|6525|smoothelin##AK095916|SMTN|6525|smoothelin##BC013421|SELM|140606|selenoprotein M##BC030236|SELM|140606|selenoprotein M##BC042299|SELM|140606|selenoprotein M##BC068004|SELM|140606|selenoprotein M##NM_080430|SELM|140606|selenoprotein M	0.981585	CTCF.p2:-15:0.982
chr1	109370855	109370990	reg1002416.p1	15.837	+	TSC_hg19_v1_chr1_+_109289354 CU690494	-81566	+	BC038099 TSC_hg19_v1_chr1_+_109289347	-81575	+	TSC_hg19_v1_chr1_+_109289295 AK290134 AK223170 AK291322 AK312910 D63506 BC047764 BC028028	-81615	+	AK313772 BC030647 AL832216 NM_152763	28788	-	TSC_hg19_v1_chr1_+_109419606 AB445462 NM_013296 AK314249	48689	+	TSC_hg19_v1_chr1_+_109419783 AK295563 BC027732	48865	+	BC038099|STXBP3|6814|syntaxin binding protein 3##AK290134|STXBP3|6814|syntaxin binding protein 3##AK223170|STXBP3|6814|syntaxin binding protein 3##AK291322|STXBP3|6814|syntaxin binding protein 3##AK312910|STXBP3|6814|syntaxin binding protein 3##D63506|STXBP3|6814|syntaxin binding protein 3##BC047764|STXBP3|6814|syntaxin binding protein 3##BC028028|STXBP3|6814|syntaxin binding protein 3##AK313772|AKNAD1|254268|AKNA domain containing 1##BC030647|AKNAD1|254268|AKNA domain containing 1##AL832216|AKNAD1|254268|AKNA domain containing 1##NM_152763|AKNAD1|254268|AKNA domain containing 1##AB445462|GPSM2|29899|G-protein signaling modulator 2##NM_013296|GPSM2|29899|G-protein signaling modulator 2##AK314249|GPSM2|29899|G-protein signaling modulator 2##AK295563|GPSM2|29899|G-protein signaling modulator 2##BC027732|GPSM2|29899|G-protein signaling modulator 2	0.999102	CTCF.p2:-3:0.999
chr11	65585781	65585913	reg1001967.p1	15.837	+	TSC_hg19_v1_chr11_+_65554569 AK291711 BX648725	-31252	+	NM_004561 BC059408 TSC_hg19_v1_chr11_+_65554533	-31324	+	NM_138368	-38026	-	TSC_hg19_v1_chr11_+_65601409 NM_152760 AK293827 AL833261 AK309789 AK296055 AK299512 BC040981 AK309435 AK289587 AK055496 AK311588 BC045563 CU691940 CU692270	15619	+	X95404 BC011005 BC018256 BC012318 BC012265 TSC_hg19_v1_chr11_-_65625648 AK303614	39787	-	D28345 TSC_hg19_v1_chr11_-_65625651	39803	-	AK291711|OVOL1|5017|ovo-like 1(Drosophila)##BX648725|OVOL1|5017|ovo-like 1(Drosophila)##NM_004561|OVOL1|5017|ovo-like 1(Drosophila)##BC059408|OVOL1|5017|ovo-like 1(Drosophila)##NM_138368|DKFZp761E198|91056|adaptor protein 5##NM_152760|SNX32|254122|sorting nexin 32##AK293827|SNX32|254122|sorting nexin 32##AL833261|SNX32|254122|sorting nexin 32##AK309789|SNX32|254122|sorting nexin 32##AK296055|SNX32|254122|sorting nexin 32##AK299512|SNX32|254122|sorting nexin 32##BC040981|SNX32|254122|sorting nexin 32##AK309435|SNX32|254122|sorting nexin 32##AK289587|SNX32|254122|sorting nexin 32##AK055496|SNX32|254122|sorting nexin 32##BC045563|SNX32|254122|sorting nexin 32##X95404|CFL1|1072|cofilin 1 (non-muscle)##BC011005|CFL1|1072|cofilin 1 (non-muscle)##BC018256|CFL1|1072|cofilin 1 (non-muscle)##BC012318|CFL1|1072|cofilin 1 (non-muscle)##BC012265|CFL1|1072|cofilin 1 (non-muscle)	1.91766	CTCF.p2:15:0.741	CTCF.p2:-53:0.921	CTCF.p2:72:0.257
chr14	93700456	93700565	reg1001312.p2	15.835	+	TSC_hg19_v1_chr14_+_93673628 AB590826 BC051819 BX248249	-26876	+	BC017013 TSC_hg19_v1_chr14_+_93673625	-26886	+	TSC_hg19_v1_chr14_+_93673600 BC015046 AK315492	-26914	+	TSC_hg19_v1_chr14_-_93799368 AB040958 AK001510	98855	-	TSC_hg19_v1_chr14_-_93799376 AK291422 BC141850 BX248762 NM_001002860 NM_018167 BC047071	98894	-	AK125327 NM_020818	99054	+	BC051819|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BX248249|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BC017013|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BC015046|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##AK315492|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##AB040958|BTBD7|55727|BTB (POZ) domain containing 7##AK001510|BTBD7|55727|BTB (POZ) domain containing 7##AK291422|BTBD7|55727|BTB (POZ) domain containing 7##BC141850|BTBD7|55727|BTB (POZ) domain containing 7##BX248762|BTBD7|55727|BTB (POZ) domain containing 7##NM_001002860|BTBD7|55727|BTB (POZ) domain containing 7##NM_018167|BTBD7|55727|BTB (POZ) domain containing 7##BC047071|BTBD7|55727|BTB (POZ) domain containing 7##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)	0.0	
chr15	71735921	71736050	reg1001959.p1	15.833	+	NM_024817 BC140868	-302175	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-328114	-	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	-551010	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	103595	+	AF121129 NM_014249 NM_016346 AF148128	366927	+	AK097557 NM_001166340	670613	+	NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49##AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8	0.374652	CTCF.p2:-6:0.375
chr2	43174114	43174256	reg1001508.p1	15.832	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-154434	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-182885	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-378288	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	279160	-	TSC_hg19_v1_chr2_-_43453736 BC020369	279545	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	279557	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.946939	CTCF.p2:-15:0.947
chr7	73815705	73815833	reg1002423.p1	15.831	+	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	-111982	+	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	-147033	-	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	-147058	-	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	52395	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	52539	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	52666	+	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1	0.914283	CTCF.p2:2:0.914
chr1	161617477	161617623	reg1002201.p1	15.830	+	NM_000570	-15798	-	NM_001244753	-16299	-	NM_201563 AK308168 AK307162 BC137397 BC137423 X17652 U90938 U90939 U90940 U90941 CU689254	-66373	+	NM_001002273 NM_001002274 NM_001002275 NM_001190828 NM_004001 AF543826 M31933 X17653 AK308150 AB209585 BC062629 X52473 X62573 BC146678 M28696 M31934 BC031992 BC141826 U90941 AB590317 BC148273 CR407635 CU689254 DQ891344 DQ894525 U87560 U87561 U87562 U87563 U87564 U87565 U87566 U87567 U87568 U87569 U87570 U87571 U87572 U87573 U87574 U87575 U87576 U87577 M31935	15442	+	AF531423 NM_001184866 NM_001184867 NM_001184870 NM_001184871 NM_001184872 NM_001184873 NM_032738	59211	+	AY670683 AY670684 AY670685 AY670686 AY670687 NM_001002901 AY786314	74905	+	NM_000570|FCGR3B|2215|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)##NM_001244753|FCGR3B|2215|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)##NM_201563|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##AK308168|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##AK307162|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC137397|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC137423|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##X17652|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90938|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90939|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90940|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90941|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##NM_001002273|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_001002274|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_001002275|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_001190828|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_004001|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AF543826|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M31933|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##X17653|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AK308150|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AB209585|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##X52473|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##X62573|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC146678|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M28696|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M31934|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC031992|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC141826|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U90941|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC148273|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##CR407635|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##DQ891344|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##DQ894525|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87560|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87561|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87562|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87563|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87564|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87565|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87566|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87567|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87568|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87569|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87570|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87571|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87572|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87573|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87574|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87575|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87576|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87577|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M31935|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AF531423|FCRLA|84824|Fc receptor-like A##NM_001184866|FCRLA|84824|Fc receptor-like A##NM_001184867|FCRLA|84824|Fc receptor-like A##NM_001184870|FCRLA|84824|Fc receptor-like A##NM_001184871|FCRLA|84824|Fc receptor-like A##NM_001184872|FCRLA|84824|Fc receptor-like A##NM_001184873|FCRLA|84824|Fc receptor-like A##NM_032738|FCRLA|84824|Fc receptor-like A##AY670683|FCRLB|127943|Fc receptor-like B##AY670684|FCRLB|127943|Fc receptor-like B##AY670685|FCRLB|127943|Fc receptor-like B##AY670686|FCRLB|127943|Fc receptor-like B##AY670687|FCRLB|127943|Fc receptor-like B##NM_001002901|FCRLB|127943|Fc receptor-like B##AY786314|FCRLB|127943|Fc receptor-like B	0.397109	CTCF.p2:-9:0.397
chr20	23587321	23587447	reg1001206.p1	15.830	+	AF494536 BC137302 BC137303 NM_001008693	-824	-	AY358615 AK312112 BC029656 NM_080610	-38028	-	AF059244 NM_005492	-115619	+	BX647523 BT006839 CR541988 CR542018 AB590227 DQ891439 EU176584 AB587083 TSC_hg19_v1_chr20_-_23618593 BC013083 NM_000099 X05607 BC110305 AK312213	31115	-	CU688086 BC074952 BC074953 NM_001899 X54667 BC065714	82257	-	J03870 BC021225 NM_001898	144181	-	AF494536|CST9|128822|cystatin 9 (testatin)##BC137302|CST9|128822|cystatin 9 (testatin)##BC137303|CST9|128822|cystatin 9 (testatin)##NM_001008693|CST9|128822|cystatin 9 (testatin)##AY358615|CST9L|128821|cystatin 9-like##AK312112|CST9L|128821|cystatin 9-like##BC029656|CST9L|128821|cystatin 9-like##NM_080610|CST9L|128821|cystatin 9-like##AF059244|CST8|10047|cystatin 8 (cystatin-related epididymal specific)##NM_005492|CST8|10047|cystatin 8 (cystatin-related epididymal specific)##BX647523|CST3|1471|cystatin C##BT006839|CST3|1471|cystatin C##CR541988|CST3|1471|cystatin C##CR542018|CST3|1471|cystatin C##DQ891439|CST3|1471|cystatin C##EU176584|CST3|1471|cystatin C##AB587083|CST3|1471|cystatin C##BC013083|CST3|1471|cystatin C##NM_000099|CST3|1471|cystatin C##X05607|CST3|1471|cystatin C##BC110305|CST3|1471|cystatin C##AK312213|CST3|1471|cystatin C##BC074952|CST4|1472|cystatin S##BC074953|CST4|1472|cystatin S##NM_001899|CST4|1472|cystatin S##X54667|CST4|1472|cystatin S##BC065714|CST4|1472|cystatin S##J03870|CST1|1469|cystatin SN##BC021225|CST1|1469|cystatin SN##NM_001898|CST1|1469|cystatin SN	0.79562	CTCF.p2:0:0.796
chr15	81567525	81567630	reg1001419.p1	15.828	+	NM_172217 AY324389	-49888	+	AK124725 NM_001172128 AK124565 AK131530	-78359	+	AK302120 BC062471 NM_173528 AK307565	-140950	+	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	21727	+	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	48917	-	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	98908	-	NM_172217|IL16|3603|interleukin 16##AY324389|IL16|3603|interleukin 16##AK124725|IL16|3603|interleukin 16##NM_001172128|IL16|3603|interleukin 16##AK124565|IL16|3603|interleukin 16##AK131530|IL16|3603|interleukin 16##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3	0.995925	CTCF.p2:-7:0.996
chr20	60586018	60586143	reg1002109.p1	15.825	+	NM_001252339 AK124724	-411256	+	AK308345 NM_001252338	-511604	+	TSC_hg19_v1_chr20_+_59827453 BC101651 BC112150 NM_001794 AK315192 L34059	-758575	+	U75308 NM_003185 Y11354 TSC_hg19_v1_chr20_-_60640882	54799	-	TSC_hg19_v1_chr20_+_60697530 BC057387 NM_144703 BC035702	111434	+	TSC_hg19_v1_chr20_+_60697578 CU691202	111564	+	NM_001252339|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK124724|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK308345|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252338|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC101651|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC112150|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001794|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK315192|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##L34059|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##U75308|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##NM_003185|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##Y11354|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##BC057387|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##NM_144703|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##BC035702|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)	0.199126	
chr21	43870154	43870284	reg1001217.p2	15.823	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-46207	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-54058	-	M12075 BC032811 NM_003225 X00474 X52003	-83597	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	46161	-	AJ269529 NM_018964	49522	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	63784	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.177677	
chr15	90304113	90304215	reg1001253.p1	15.822	+	AL357571 TSC_hg19_v1_chr15_-_90294395 EU446875 NM_018670 BC006219	-9715	-	BC064626 NM_020212 AK304683 AK097525	-70121	+	BC101164 BC114384 AK297442 CR542046 CR542075 CU679445 DQ893368 DQ896686 DQ896687 DQ896688 EU176800 AK300978 BC009697 AF093668 AK313318 TSC_hg19_v1_chr15_-_90233984 AB015594 NM_003847 AK001415	-70234	-	BC111413 NM_001039958	15424	+	AK298134 TSC_hg19_v1_chr15_-_90347178	43011	-	AK298339 TSC_hg19_v1_chr15_-_90347590	43406	-	AL357571|MESP1|55897|mesoderm posterior 1 homolog (mouse)##EU446875|MESP1|55897|mesoderm posterior 1 homolog (mouse)##NM_018670|MESP1|55897|mesoderm posterior 1 homolog (mouse)##BC006219|MESP1|55897|mesoderm posterior 1 homolog (mouse)##BC064626|WDR93|56964|WD repeat domain 93##NM_020212|WDR93|56964|WD repeat domain 93##AK304683|WDR93|56964|WD repeat domain 93##AK097525|WDR93|56964|WD repeat domain 93##BC101164|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC114384|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK297442|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##CR542046|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##CR542075|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ893368|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896686|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896687|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896688|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##EU176800|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK300978|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC009697|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AF093668|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK313318|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AB015594|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##NM_003847|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK001415|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC111413|MESP2|145873|mesoderm posterior 2 homolog (mouse)##NM_001039958|MESP2|145873|mesoderm posterior 2 homolog (mouse)##AK298134|ANPEP|290|alanyl (membrane) aminopeptidase##AK298339|ANPEP|290|alanyl (membrane) aminopeptidase	0.975971	CTCF.p2:-3:0.976
chr11	65756539	65756681	reg1001268.p1	15.820	+	NM_005146 TSC_hg19_v1_chr11_+_65729203 AK223016 AK293200 AK297589 AK309104 AK298184 BC001058 AB006198 AF353625 DQ891694 EU176645 BT006637 Y14314	-27341	+	AK057442 BC104021 BC104022 BC104023 NM_152762	-43496	+	TSC_hg19_v1_chr11_+_65686920 BC010025 AB463581 CU679579 EU446936 X96506	-69651	+	TSC_hg19_v1_chr11_+_65769409 AF068235 NM_001143985 NM_003860	12869	+	AK094129 TSC_hg19_v1_chr11_-_65769629 BC005131 AK311891 NM_001242481 NM_001242482 NM_001242483 NM_001242484 NM_001242485 NM_001242486 NM_032325	13020	-	TSC_hg19_v1_chr11_+_65769774 BC107702	13209	+	NM_005146|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK223016|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK293200|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK297589|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK298184|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BC001058|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AB006198|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AF353625|SART1|9092|squamous cell carcinoma antigen recognized by T cells##DQ891694|SART1|9092|squamous cell carcinoma antigen recognized by T cells##EU176645|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BT006637|SART1|9092|squamous cell carcinoma antigen recognized by T cells##Y14314|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK057442|TSGA10IP|254187|testis specific, 10 interacting protein##BC104021|TSGA10IP|254187|testis specific, 10 interacting protein##BC104022|TSGA10IP|254187|testis specific, 10 interacting protein##BC104023|TSGA10IP|254187|testis specific, 10 interacting protein##NM_152762|TSGA10IP|254187|testis specific, 10 interacting protein##BC010025|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##EU446936|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##X96506|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##AF068235|BANF1|8815|barrier to autointegration factor 1##NM_001143985|BANF1|8815|barrier to autointegration factor 1##NM_003860|BANF1|8815|barrier to autointegration factor 1##AK094129|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##BC005131|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##AK311891|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242481|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242482|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242483|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242484|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242485|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242486|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_032325|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##BC107702|BANF1|8815|barrier to autointegration factor 1	1.110087	CTCF.p2:-4:0.959
chr5	173046073	173046215	reg1002057.p1	15.820	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-2471	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-2516	-	BC003114 TSC_hg19_v1_chr5_-_173043602	-2547	-	TSC_hg19_v1_chr5_+_173315343 NM_030627	269234	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	370046	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	426567	+	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein	0.0	
chr7	105794408	105794527	reg1001418.p1	15.819	+	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	-41452	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	-41723	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	-41786	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	130895	-	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	131056	-	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	507036	-	EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##X61382|SYPL1|6856|synaptophysin-like 1##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74	0.399916	CTCF.p2:17:0.400
chr11	74640924	74641047	reg1002051.p1	15.818	+	TSC_hg19_v1_chr11_+_74459915 AB082522 NM_001098638	-181077	+	BC142623 TSC_hg19_v1_chr11_-_74442472	-198532	-	NM_015424 AK304519 AY358522 AY279090 AY279091	-198780	-	TSC_hg19_v1_chr11_-_74660137 AK056364	19139	-	TSC_hg19_v1_chr11_-_74660150 BC064584 BC037294 BC040541	19171	-	TSC_hg19_v1_chr11_-_74660177 NM_182969 CR749605	19219	-	AB082522|RNF169|254225|ring finger protein 169##NM_001098638|RNF169|254225|ring finger protein 169##BC142623|CHRDL2|25884|chordin-like 2##NM_015424|CHRDL2|25884|chordin-like 2##AK304519|CHRDL2|25884|chordin-like 2##AY358522|CHRDL2|25884|chordin-like 2##AY279090|CHRDL2|25884|chordin-like 2##AY279091|CHRDL2|25884|chordin-like 2##AK056364|XRRA1|143570|X-ray radiation resistance associated 1##BC064584|XRRA1|143570|X-ray radiation resistance associated 1##BC037294|XRRA1|143570|X-ray radiation resistance associated 1##BC040541|XRRA1|143570|X-ray radiation resistance associated 1##NM_182969|XRRA1|143570|X-ray radiation resistance associated 1##CR749605|XRRA1|143570|X-ray radiation resistance associated 1	0.958814	CTCF.p2:-10:0.959
chr17	80509827	80509935	reg1001821.p1	15.818	+	TSC_hg19_v1_chr17_+_80477607 NM_004514	-32291	+	TSC_hg19_v1_chr17_+_80416616 BC016440 CU674220 CU677625	-93239	+	TSC_hg19_v1_chr17_+_80416583 AK297875 NM_001083608 NM_012336 NM_031968 BC000438 AK000929 AK303155 AK307351 AF128406	-93318	+	TSC_hg19_v1_chr17_-_80606321 AK297477 BC000974 AM182326 AB464355 BC007838 NM_019613	96402	-	TSC_hg19_v1_chr17_-_80656575 BC035814 U05227 AB209711 BC018039 NM_006822	146653	-	TSC_hg19_v1_chr17_+_80674622 NM_024619 AK293523 AK301958 AK315373 BC007611 AK022233 AL136631 AY360465 BC014408 AB385548 CU676977 CR533461	164725	+	NM_004514|FOXK2|3607|forkhead box K2##BC016440|NARF|26502|nuclear prelamin A recognition factor##AK297875|NARF|26502|nuclear prelamin A recognition factor##NM_001083608|NARF|26502|nuclear prelamin A recognition factor##NM_012336|NARF|26502|nuclear prelamin A recognition factor##NM_031968|NARF|26502|nuclear prelamin A recognition factor##BC000438|NARF|26502|nuclear prelamin A recognition factor##AK000929|NARF|26502|nuclear prelamin A recognition factor##AK303155|NARF|26502|nuclear prelamin A recognition factor##AF128406|NARF|26502|nuclear prelamin A recognition factor##AK297477|WDR45L|56270|WDR45-like##BC000974|WDR45L|56270|WDR45-like##AM182326|WDR45L|56270|WDR45-like##BC007838|WDR45L|56270|WDR45-like##NM_019613|WDR45L|56270|WDR45-like##BC035814|RAB40B|10966|RAB40B, member RAS oncogene family##U05227|RAB40B|10966|RAB40B, member RAS oncogene family##AB209711|RAB40B|10966|RAB40B, member RAS oncogene family##BC018039|RAB40B|10966|RAB40B, member RAS oncogene family##NM_006822|RAB40B|10966|RAB40B, member RAS oncogene family##NM_024619|FN3KRP|79672|fructosamine 3 kinase related protein##AK293523|FN3KRP|79672|fructosamine 3 kinase related protein##AK301958|FN3KRP|79672|fructosamine 3 kinase related protein##AK315373|FN3KRP|79672|fructosamine 3 kinase related protein##BC007611|FN3KRP|79672|fructosamine 3 kinase related protein##AK022233|FN3KRP|79672|fructosamine 3 kinase related protein##AL136631|FN3KRP|79672|fructosamine 3 kinase related protein##AY360465|FN3KRP|79672|fructosamine 3 kinase related protein##BC014408|FN3KRP|79672|fructosamine 3 kinase related protein##CR533461|FN3KRP|79672|fructosamine 3 kinase related protein	0.777972	CTCF.p2:12:0.778
chr6	18504325	18504453	reg1000795.p2	15.814	+	AK096832 NM_182757 AB076367 BC063311 AL832329	-116722	+	X64229 TSC_hg19_v1_chr6_-_18264759 BC012442 AK312616 AK298089 AK294079 BC035259 AK297749 NM_001134709 NM_003472	-239668	-	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	-348734	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	1333246	+	TSC_hg19_v1_chr6_+_19838612 AF085889	1334294	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	1708283	-	AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##X64229|DEK|7913|DEK oncogene##BC012442|DEK|7913|DEK oncogene##AK312616|DEK|7913|DEK oncogene##AK298089|DEK|7913|DEK oncogene##AK294079|DEK|7913|DEK oncogene##BC035259|DEK|7913|DEK oncogene##AK297749|DEK|7913|DEK oncogene##NM_001134709|DEK|7913|DEK oncogene##NM_003472|DEK|7913|DEK oncogene##BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1	0.821772	CTCF.p2:16:0.822
chr1	206908010	206908130	reg1001997.p1	15.812	+	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-49599	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-98960	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	-99226	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	37809	-	AY040367 NM_153758 AB463800	64156	+	AF453946 NM_013371	94151	+	BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19	0.017757	
chr14	32542920	32543054	reg1002337.p1	15.806	+	AK093789 NM_001201574	-359213	+	AK301447 NM_001201573	-495866	+	TSC_hg19_v1_chr14_+_32030642 NM_025152 AK316445 BX248028 AK295326 BC024919 AK022722 CU692938	-512330	+	TSC_hg19_v1_chr14_+_32546174 BC050059	3192	+	TSC_hg19_v1_chr14_+_32546223 BC075799	3258	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	3519	+	AK093789|NUBPL|80224|nucleotide binding protein-like##NM_001201574|NUBPL|80224|nucleotide binding protein-like##AK301447|NUBPL|80224|nucleotide binding protein-like##NM_001201573|NUBPL|80224|nucleotide binding protein-like##NM_025152|NUBPL|80224|nucleotide binding protein-like##AK316445|NUBPL|80224|nucleotide binding protein-like##BX248028|NUBPL|80224|nucleotide binding protein-like##AK295326|NUBPL|80224|nucleotide binding protein-like##BC024919|NUBPL|80224|nucleotide binding protein-like##AK022722|NUBPL|80224|nucleotide binding protein-like##BC050059|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5	0.638496	CTCF.p2:-4:0.638
chr11	76802316	76802438	reg1002092.p1	15.805	+	TSC_hg19_v1_chr11_+_76778017 BC018123 NM_004055 AK128124 AK313132 AK310978 AK094150 AB209087	-24350	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	-56918	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	-230384	+	CU686775 BC069115 BC069365 NM_006189	11507	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	36951	+	TSC_hg19_v1_chr11_+_76883833 BC023212	81471	+	BC018123|CAPN5|726|calpain 5##NM_004055|CAPN5|726|calpain 5##AK128124|CAPN5|726|calpain 5##AK313132|CAPN5|726|calpain 5##AK310978|CAPN5|726|calpain 5##AK094150|CAPN5|726|calpain 5##AB209087|CAPN5|726|calpain 5##NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3##BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA##BC023212|MYO7A|4647|myosin VIIA	1.028186	CTCF.p2:3:0.998
chr15	51673535	51673663	reg1001344.p2	15.802	+	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	-39805	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	-42835	-	AY517501 NM_207381	-276127	-	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	241374	-	AF453583 NM_001165257 NM_013243 AF078851 TSC_hg19_v1_chr15_+_51973699 AY359093 AK075314 AK296466 AK290175	300032	+	AK129759 DQ892424 DQ895638 TSC_hg19_v1_chr15_-_52029856	356277	-	NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2##AF453583|SCG3|29106|secretogranin III##NM_001165257|SCG3|29106|secretogranin III##NM_013243|SCG3|29106|secretogranin III##AF078851|SCG3|29106|secretogranin III##AY359093|SCG3|29106|secretogranin III##AK075314|SCG3|29106|secretogranin III##AK296466|SCG3|29106|secretogranin III##AK290175|SCG3|29106|secretogranin III##AK129759|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ892424|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ895638|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	0.991398	CTCF.p2:18:0.991
chr12	113486594	113486713	reg1001343.p1	15.801	+	TSC_hg19_v1_chr12_+_113416323 NM_001032731 NM_002535 NM_016817 BC010625 BC053870 BC023637 AK292906 BC069052 BC049215 AK292796 M87284 M87434 AB590925 CU690608	-70313	+	AF063613 TSC_hg19_v1_chr12_+_113376306	-110313	+	TSC_hg19_v1_chr12_+_113376245 AK000608 NM_006187 BC113746 BC012015 AK292949	-110403	+	NM_004416 BC048216	9037	+	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	86759	-	AF086713 AB208935 AK294350 NM_001193520 NM_004658	87378	-	NM_001032731|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_002535|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_016817|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC010625|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC053870|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC023637|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292906|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC069052|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC049215|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292796|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87284|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87434|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AF063613|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##AK000608|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##NM_006187|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##BC113746|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##BC012015|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##AK292949|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)##BC048216|DTX1|1840|deltex homolog 1 (Drosophila)##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	0.971784	CTCF.p2:-10:0.972
chr11	67407582	67407692	reg1001456.p1	15.797	+	BC113485 BC113487 AY229977 NM_005995	-610	-	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	-10234	-	BC007619 TSC_hg19_v1_chr11_+_67377037	-30656	+	AY032593 AY040761 AY169233 BC008689 NM_080658	10481	-	AK299956 TSC_hg19_v1_chr11_-_67442068	34406	-	TSC_hg19_v1_chr11_-_67442086 AK309277 NM_000695 AK092464	34494	-	BC113485|TBX10|347853|T-box 10##BC113487|TBX10|347853|T-box 10##AY229977|TBX10|347853|T-box 10##NM_005995|TBX10|347853|T-box 10##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC007619|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AY032593|ACY3|91703|aspartoacylase (aminocyclase) 3##AY040761|ACY3|91703|aspartoacylase (aminocyclase) 3##AY169233|ACY3|91703|aspartoacylase (aminocyclase) 3##BC008689|ACY3|91703|aspartoacylase (aminocyclase) 3##NM_080658|ACY3|91703|aspartoacylase (aminocyclase) 3##AK299956|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	0.562872	CTCF.p2:-14:0.533
chr16	48151506	48151640	reg1001656.p1	15.797	+	TSC_hg19_v1_chr16_+_47495241 X84908 CR936710 BC033657 AK309226	-656334	+	TSC_hg19_v1_chr16_+_47495206 NM_000293 NM_001031835 AK298588	-656385	+	TSC_hg19_v1_chr16_-_47495158 AF212247 AK301908	-656416	-	AY196326 AY040220 NM_033226	29047	-	AY040219 NM_033151	114608	-	AF367202 AF411579 NM_032583 NM_145186	117514	-	X84908|PHKB|5257|phosphorylase kinase, beta##CR936710|PHKB|5257|phosphorylase kinase, beta##BC033657|PHKB|5257|phosphorylase kinase, beta##AK309226|PHKB|5257|phosphorylase kinase, beta##NM_000293|PHKB|5257|phosphorylase kinase, beta##NM_001031835|PHKB|5257|phosphorylase kinase, beta##AF212247|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK301908|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AY196326|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040220|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##NM_033226|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040219|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_033151|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF367202|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF411579|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_032583|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_145186|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11	0.999086	CTCF.p2:-17:0.999
chr10	102102243	102102372	reg1002425.p1	15.796	+	AF073481 NM_001253837 NM_016112	-12065	-	AY531265 AB463442 TSC_hg19_v1_chr10_-_102046438 AB593084 AK298969 NM_173809	-55869	-	BC020494 AY278457 AK054697 NM_001001342	-56277	-	NM_005063 TSC_hg19_v1_chr10_+_102106877 AB032261 BC062303	4534	+	TSC_hg19_v1_chr10_+_102106989 AK312312	4668	+	TSC_hg19_v1_chr10_+_102107054 AB208982 AF097514 AK222862 Y13647	4722	+	AF073481|PKD2L1|9033|polycystic kidney disease 2-like 1##NM_001253837|PKD2L1|9033|polycystic kidney disease 2-like 1##NM_016112|PKD2L1|9033|polycystic kidney disease 2-like 1##AY531265|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AB593084|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AK298969|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_173809|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AK312312|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AB208982|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AF097514|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AK222862|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##Y13647|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	0.79571	CTCF.p2:-5:0.796
chr1	27935264	27935378	reg1001235.p1	15.794	+	BC064935 TSC_hg19_v1_chr1_-_27930394	-4944	-	BC042058 NM_001029882	-5200	-	TSC_hg19_v1_chr1_-_27816676 NM_001201404 NM_006990	-118645	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	17349	-	M27454 AK301078 BC002836 AK304846 NM_001042729	17754	-	TSC_hg19_v1_chr1_-_27961656 BC064382 AK130188 NM_005248	26365	-	BC064935|AHDC1|27245|AT hook, DNA binding motif, containing 1##NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1##NM_001201404|WASF2|10163|WAS protein family, member 2##NM_006990|WASF2|10163|WAS protein family, member 2##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##M27454|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK301078|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042729|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##BC064382|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK130188|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_005248|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	0.0	
chr6	12289691	12289811	reg1001216.p2	15.793	+	NM_002114	-277028	+	NM_001143948 NM_032744	-510472	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-751253	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	842	+	TSC_hg19_v1_chr6_+_12514301 D28417	224551	+	AK295263 TSC_hg19_v1_chr6_+_12716998	427192	+	NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1	0.407621	CTCF.p2:3:0.408
chr7	49830793	49830919	reg1001104.p1	15.792	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-17586	+	AK126220 AY204751 BX647273 NM_152701	-1619801	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-1701901	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	301968	-	NM_001161834	304825	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	513497	+	AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	0.906415	CTCF.p2:21:0.906
chr2	237252339	237252457	reg1001806.p1	15.790	+	NM_212556 BX647589	-79404	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-175766	-	AK311262 TSC_hg19_v1_chr2_-_237076045	-176384	-	BC043504 NM_024726 AK294105 BC028699	163734	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	226030	+	BC036499 NM_006710 NM_198189	741620	+	NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	0.782826	CTCF.p2:-2:0.783
chr20	21485934	21486065	reg1002061.p1	15.789	+	NM_033176 TSC_hg19_v1_chr20_-_21378181	-107885	-	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	-202024	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	-379272	+	NM_002509	8664	-	TSC_hg19_v1_chr20_+_21686296 NM_006192	200295	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	200534	+	NM_033176|NKX2-4|644524|NK2 homeobox 4##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2##BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_002509|NKX2-2|4821|NK2 homeobox 2##NM_006192|PAX1|5075|paired box 1##BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1	0.0	
chr9	116208664	116208809	reg1001244.p1	15.788	+	AK128127 NM_144488	-1726	+	AK074762 NM_017443	-35747	-	AK313867 TSC_hg19_v1_chr9_+_116172965 BC033037 AK301872 BC026884 NM_152786	-35759	+	TSC_hg19_v1_chr9_+_116226007 AK125059 NM_017790 AK074977	17278	+	AF463495 NM_130795 AK096840 BC042555 CU692096 AF490840	55045	+	TSC_hg19_v1_chr9_+_116327336 AK289666 AK301515 AK310705 NM_134427	118596	+	AK128127|RGS3|5998|regulator of G-protein signaling 3##NM_144488|RGS3|5998|regulator of G-protein signaling 3##AK074762|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##NM_017443|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##AK313867|C9orf43|257169|chromosome 9 open reading frame 43##BC033037|C9orf43|257169|chromosome 9 open reading frame 43##AK301872|C9orf43|257169|chromosome 9 open reading frame 43##BC026884|C9orf43|257169|chromosome 9 open reading frame 43##NM_152786|C9orf43|257169|chromosome 9 open reading frame 43##AK125059|RGS3|5998|regulator of G-protein signaling 3##NM_017790|RGS3|5998|regulator of G-protein signaling 3##AK074977|RGS3|5998|regulator of G-protein signaling 3##AF463495|RGS3|5998|regulator of G-protein signaling 3##NM_130795|RGS3|5998|regulator of G-protein signaling 3##AK096840|RGS3|5998|regulator of G-protein signaling 3##BC042555|RGS3|5998|regulator of G-protein signaling 3##AF490840|RGS3|5998|regulator of G-protein signaling 3##AK289666|RGS3|5998|regulator of G-protein signaling 3##AK301515|RGS3|5998|regulator of G-protein signaling 3##AK310705|RGS3|5998|regulator of G-protein signaling 3##NM_134427|RGS3|5998|regulator of G-protein signaling 3	0.834329	CTCF.p2:-23:0.834
chr20	47950584	47950706	reg1001715.p1	15.787	+	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-55450	+	TSC_hg19_v1_chr20_+_47895176 BC042807 CR936805	-55473	+	TSC_hg19_v1_chr20_-_47894629 BC030789 NM_021035	-55972	-	BC110572 BC110573 NM_004975	148534	-	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	234044	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	379585	-	BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC042807|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##CR936805|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC030789|ZNFX1|57169|zinc finger, NFX1-type containing 1##NM_021035|ZNFX1|57169|zinc finger, NFX1-type containing 1##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	1.991632	CTCF.p2:-27:1.000	CTCF.p2:34:0.992
chr19	48210671	48210797	reg1001431.p1	15.786	+	TSC_hg19_v1_chr19_+_48111441 BC032065 NM_015711	-99290	+	NM_001101419	-151622	-	TSC_hg19_v1_chr19_-_48018321 BC028234 AK098401 NM_003827	-192319	-	NM_014601 TSC_hg19_v1_chr19_+_48216678 AK315548 AK074701 AK097126 AK097228 AK296907 AK298067 BC014445	5916	+	NM_015710 TSC_hg19_v1_chr19_+_48248797	38060	+	TSC_hg19_v1_chr19_+_48248802 AK303180 AK297877 AK303918 AK309788 AK301117 AF182076 BC006311 BC013203 AY535000 CU679611 DQ892724 DQ895973 AK024486 BC013235 BC013307 BC014009 BC039869 BC007248 BC004229 AF296124 AL359336 AL359335	38101	+	BC032065|GLTSCR1|29998|glioma tumor suppressor candidate region gene 1##NM_015711|GLTSCR1|29998|glioma tumor suppressor candidate region gene 1##NM_001101419|ZNF541|84215|zinc finger protein 541##BC028234|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##AK098401|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##NM_003827|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##NM_014601|EHD2|30846|EH-domain containing 2##AK315548|EHD2|30846|EH-domain containing 2##AK074701|EHD2|30846|EH-domain containing 2##AK097126|EHD2|30846|EH-domain containing 2##AK097228|EHD2|30846|EH-domain containing 2##AK296907|EHD2|30846|EH-domain containing 2##AK298067|EHD2|30846|EH-domain containing 2##BC014445|EHD2|30846|EH-domain containing 2##NM_015710|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK297877|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK303918|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK309788|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK301117|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF182076|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC006311|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013203|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AY535000|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ892724|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ895973|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK024486|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013235|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013307|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC014009|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC039869|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC007248|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC004229|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF296124|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359336|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359335|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2	0.995849	CTCF.p2:2:0.996
chr5	32489940	32490083	reg1002215.p1	15.782	+	TSC_hg19_v1_chr5_-_32444845 AK292214 AK309638 BC017879 NM_016107	-45075	-	TSC_hg19_v1_chr5_-_32444820 BC107417 AJ314790 BC030540 BC137084 BC137085	-45233	-	TSC_hg19_v1_chr5_-_32403324 BC062986 BC051893	-86658	-	NM_006713 TSC_hg19_v1_chr5_+_32585676 AK294124 AK311754 BC022339 AK307268 BC009610 BC018189 BC071655 BC063402 BC010537 BC105972 AB209285	95645	+	NM_001204376 AK300094 AK308301	220739	+	AK290870 NM_000908 NM_001204375 M59305	221477	+	AK292214|ZFR|51663|zinc finger RNA binding protein##AK309638|ZFR|51663|zinc finger RNA binding protein##BC017879|ZFR|51663|zinc finger RNA binding protein##NM_016107|ZFR|51663|zinc finger RNA binding protein##BC107417|ZFR|51663|zinc finger RNA binding protein##AJ314790|ZFR|51663|zinc finger RNA binding protein##BC030540|ZFR|51663|zinc finger RNA binding protein##BC137084|ZFR|51663|zinc finger RNA binding protein##BC137085|ZFR|51663|zinc finger RNA binding protein##BC062986|ZFR|51663|zinc finger RNA binding protein##BC051893|ZFR|51663|zinc finger RNA binding protein##NM_006713|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK294124|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK311754|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC022339|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK307268|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC009610|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC018189|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC071655|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC063402|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC010537|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC105972|SUB1|10923|SUB1 homolog (S. cerevisiae)##AB209285|SUB1|10923|SUB1 homolog (S. cerevisiae)##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)	0.623944	CTCF.p2:-15:0.624
chr12	54069965	54070090	reg1001390.p1	15.781	+	D28402 TSC_hg19_v1_chr12_-_54069859 AK130971	-151	-	TSC_hg19_v1_chr12_-_54020167 BC136302 X52943 AK298853 AK313507 BC032433 BC140006 NM_001130060 NM_001206682 NM_006856	-49874	-	TSC_hg19_v1_chr12_-_54019764 BC042363 NM_001206683	-50292	-	NM_005176	81	-	NM_001002031	484	-	AB040969 TSC_hg19_v1_chr12_-_54121231 AF370415 AY563137 BC003177 AY358397 AL136895 AK122773 AK222646 AK092788 AX747731 AK294424 AK296497 AK309199 AK027881 AK315578 NM_001143682 NM_020898	51227	-	D28402|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##AK130971|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##BC136302|ATF7|11016|activating transcription factor 7##X52943|ATF7|11016|activating transcription factor 7##AK298853|ATF7|11016|activating transcription factor 7##AK313507|ATF7|11016|activating transcription factor 7##BC032433|ATF7|11016|activating transcription factor 7##BC140006|ATF7|11016|activating transcription factor 7##NM_001130060|ATF7|11016|activating transcription factor 7##NM_001206682|ATF7|11016|activating transcription factor 7##NM_006856|ATF7|11016|activating transcription factor 7##BC042363|ATF7|11016|activating transcription factor 7##NM_001206683|ATF7|11016|activating transcription factor 7##NM_005176|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##NM_001002031|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1##BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1	0.311222	CTCF.p2:0:0.311
chr8	141646261	141646375	reg1001479.p1	15.781	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-694	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-124755	+	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	-124926	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	364938	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	492419	+	AK128212 NM_001080431	592354	-	BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4	0.566867	CTCF.p2:4:0.567
chr9	4315714	4315851	reg1002356.p1	15.781	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-15751	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-15819	-	TSC_hg19_v1_chr9_-_4299574 DQ438882 DQ438887 DQ438892 DQ438899 DQ438902	-16199	-	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	174655	+	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	346529	+	AK295831 NM_001039395	350887	-	AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##DQ438882|GLIS3|169792|GLIS family zinc finger 3##DQ438887|GLIS3|169792|GLIS family zinc finger 3##DQ438892|GLIS3|169792|GLIS family zinc finger 3##DQ438899|GLIS3|169792|GLIS family zinc finger 3##DQ438902|GLIS3|169792|GLIS family zinc finger 3##NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68	0.958741	CTCF.p2:11:0.959
chr6	156885645	156885781	reg1001965.p1	15.780	+	AF190122 NM_015718	-1108677	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1250090	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1250128	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	213350	+	TSC_hg19_v1_chr6_+_157099206 AB587572	213512	+	TSC_hg19_v1_chr6_+_157099283 AF521671	213571	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.998436	CTCF.p2:-11:0.998
chr5	136996150	136996288	reg1002319.p1	15.779	+	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	-161239	-	TSC_hg19_v1_chr5_-_136834420 AK094489	-161792	-	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	-161978	-	AF208068 AK314707 TSC_hg19_v1_chr5_-_137071541 AB032955	75286	-	AK098190 BC034035 NM_017415 TSC_hg19_v1_chr5_-_137071807	75542	-	TSC_hg19_v1_chr5_-_137088952 BC012490	92737	-	AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AF208068|KLHL3|26249|kelch-like 3 (Drosophila)##AK314707|KLHL3|26249|kelch-like 3 (Drosophila)##AB032955|KLHL3|26249|kelch-like 3 (Drosophila)##BC034035|KLHL3|26249|kelch-like 3 (Drosophila)##NM_017415|KLHL3|26249|kelch-like 3 (Drosophila)##BC012490|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	0.999814	CTCF.p2:-11:0.970
chr17	48708069	48708204	reg1001869.p1	15.778	+	TSC_hg19_v1_chr17_+_48638339 BC110995 AF124351 NM_018896 NM_198376 NM_198377 NM_198378 NM_198379 NM_198380 NM_198382 NM_198383 NM_198384 NM_198385 NM_198386 NM_198387 NM_198388 NM_198396 NM_198397	-69743	+	AK092731 TSC_hg19_v1_chr17_+_48624553 BC111029 AK025000 AK225189 AK291805 BC025255 NM_022827 BC065526 AK308616	-83578	+	TSC_hg19_v1_chr17_+_48610095 AK000785 AK291658 AK292977 AK295730 AK296346 AK300642 BC001038 BC051365 BC077722	-98033	+	TSC_hg19_v1_chr17_+_48712188 BC046126 NM_001144070 NM_003786 AF009670 Y17151 BC058907 AF085690 AF085691 AF085692 BC104952 BC137347 BC137348 AB208954 AF083552 AB010887 BC050370 AF104943 AB384796	4073	+	AK314010 CR627413 TSC_hg19_v1_chr17_-_48785180 BC012978 EU164539 NM_052855	77007	-	TSC_hg19_v1_chr17_+_48796963 NM_006107 NM_016424 AK290540 AK225980 AK023672 BC047043 BC056409 BC002925 AK295983 DQ013876 AK001925	88857	+	BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##AK092731|SPATA20|64847|spermatogenesis associated 20##BC111029|SPATA20|64847|spermatogenesis associated 20##AK025000|SPATA20|64847|spermatogenesis associated 20##AK225189|SPATA20|64847|spermatogenesis associated 20##AK291805|SPATA20|64847|spermatogenesis associated 20##BC025255|SPATA20|64847|spermatogenesis associated 20##NM_022827|SPATA20|64847|spermatogenesis associated 20##BC065526|SPATA20|64847|spermatogenesis associated 20##AK308616|SPATA20|64847|spermatogenesis associated 20##AK000785|EPN3|55040|epsin 3##AK291658|EPN3|55040|epsin 3##AK292977|EPN3|55040|epsin 3##AK295730|EPN3|55040|epsin 3##AK296346|EPN3|55040|epsin 3##AK300642|EPN3|55040|epsin 3##BC001038|EPN3|55040|epsin 3##BC051365|EPN3|55040|epsin 3##BC077722|EPN3|55040|epsin 3##BC046126|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_001144070|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_003786|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF009670|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##Y17151|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC058907|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085690|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085691|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085692|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC104952|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137347|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137348|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB208954|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF083552|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB010887|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC050370|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF104943|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AK314010|ANKRD40|91369|ankyrin repeat domain 40##CR627413|ANKRD40|91369|ankyrin repeat domain 40##BC012978|ANKRD40|91369|ankyrin repeat domain 40##EU164539|ANKRD40|91369|ankyrin repeat domain 40##NM_052855|ANKRD40|91369|ankyrin repeat domain 40##NM_006107|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_016424|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK290540|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK225980|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK023672|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC047043|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC056409|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC002925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK295983|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##DQ013876|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK001925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)	1.954588	CTCF.p2:-11:0.996	CTCF.p2:23:0.959
chr1	31274701	31274834	reg1002046.p1	15.777	+	TSC_hg19_v1_chr1_-_31230697 NM_006762	-44077	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	-44135	-	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	-78335	-	TSC_hg19_v1_chr1_-_31345363 AL049426	70631	-	AB385258 AF248634 NM_014654 TSC_hg19_v1_chr1_-_31381606	106781	-	TSC_hg19_v1_chr1_-_31538543 BC013398 D43951 AK291779 AK300457 AF315592 AK096476 AK222605	263750	-	NM_006762|LAPTM5|7805|lysosomal protein transmembrane 5##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##AL049426|SDC3|9672|syndecan 3##AF248634|SDC3|9672|syndecan 3##NM_014654|SDC3|9672|syndecan 3##BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)##D43951|PUM1|9698|pumilio homolog 1 (Drosophila)##AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)##AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)##AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)##AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)##AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)	0.999409	CTCF.p2:-12:0.999
chr1	145427527	145427674	reg1002458.p1	15.776	+	NM_145277 NM_202004 NM_213652 NM_213653 AK223575 AK092682 AK315852 AX747669 BC017926 AK096905 AK290831 AK292742 AK092692 AK124273 AX747673 BC085604	-14337	+	AY894562 AY894570 NM_001039703	-134299	+	TSC_hg19_v1_chr1_+_145209107 NM_203458 BC010154 AK075065 BC090943 BC019835 AK092351 AK098372 AX747492 BC065219 AK293876 BC084572	-218479	+	TSC_hg19_v1_chr1_+_145438489 NM_006472 AK301203 BX537824 AK226090 S73591 BC093702 BC093704 AB527234 AY594328 BC024305 AK301148	11076	+	TSC_hg19_v1_chr1_-_145470375 AK092209 AK056984 BC004355 NM_032305 BC050418	42788	-	AK128050 NM_001039888 TSC_hg19_v1_chr1_+_145470529	42918	+	NM_145277|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_202004|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213652|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213653|HFE2|148738|hemochromatosis type 2 (juvenile)##AK223575|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092682|HFE2|148738|hemochromatosis type 2 (juvenile)##AK315852|HFE2|148738|hemochromatosis type 2 (juvenile)##BC017926|HFE2|148738|hemochromatosis type 2 (juvenile)##AK096905|HFE2|148738|hemochromatosis type 2 (juvenile)##AK290831|HFE2|148738|hemochromatosis type 2 (juvenile)##AK292742|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092692|HFE2|148738|hemochromatosis type 2 (juvenile)##AK124273|HFE2|148738|hemochromatosis type 2 (juvenile)##BC085604|HFE2|148738|hemochromatosis type 2 (juvenile)##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8##NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10##NM_203458|NOTCH2NL|388677|notch 2 N-terminal like##BC010154|NOTCH2NL|388677|notch 2 N-terminal like##AK075065|NOTCH2NL|388677|notch 2 N-terminal like##BC090943|NOTCH2NL|388677|notch 2 N-terminal like##BC019835|NOTCH2NL|388677|notch 2 N-terminal like##BC065219|NOTCH2NL|388677|notch 2 N-terminal like##BC084572|NOTCH2NL|388677|notch 2 N-terminal like##NM_006472|TXNIP|10628|thioredoxin interacting protein##AK301203|TXNIP|10628|thioredoxin interacting protein##BX537824|TXNIP|10628|thioredoxin interacting protein##AK226090|TXNIP|10628|thioredoxin interacting protein##S73591|TXNIP|10628|thioredoxin interacting protein##BC093702|TXNIP|10628|thioredoxin interacting protein##BC093704|TXNIP|10628|thioredoxin interacting protein##AY594328|TXNIP|10628|thioredoxin interacting protein##BC024305|TXNIP|10628|thioredoxin interacting protein##AK301148|TXNIP|10628|thioredoxin interacting protein##AK092209|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##AK056984|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC004355|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##NM_032305|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC050418|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##AK128050|ANKRD34A|284615|ankyrin repeat domain 34A##NM_001039888|ANKRD34A|284615|ankyrin repeat domain 34A	0.995049	CTCF.p2:-18:0.995
chr4	112865001	112865122	reg1001981.p1	15.776	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1301783	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1306892	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-1320786	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	201553	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	288023	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	341940	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.995352	CTCF.p2:-1:0.995
chr15	74674843	74674978	reg1001372.p1	15.773	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-14907	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-16375	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-64005	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	51119	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	51402	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	78537	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.999945	CTCF.p2:-11:1.000
chr7	45299748	45299853	reg1001247.p2	15.772	+	NM_005856 TSC_hg19_v1_chr7_+_45197392 AJ001016 BC022304 BC053852 AK222469 DQ891371 CU691036 AK311871 AY265459	-102404	+	TSC_hg19_v1_chr7_-_45151297 AK300489 AL833840 AK001281 AB023165 NM_004749 NM_030900 NM_199122	-148488	-	BC017235 BC014918 AK022575 AK222943 TSC_hg19_v1_chr7_-_45151294	-148517	-	TSC_hg19_v1_chr7_+_45614105 AF497515 NM_021116	314302	+	AB209496 TSC_hg19_v1_chr7_+_45614187	314399	+	TSC_hg19_v1_chr7_-_45808577 AL832059 BC092503	508790	-	NM_005856|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AJ001016|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC022304|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC053852|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK222469|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##DQ891371|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK311871|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AY265459|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK300489|TBRG4|9238|transforming growth factor beta regulator 4##AL833840|TBRG4|9238|transforming growth factor beta regulator 4##AK001281|TBRG4|9238|transforming growth factor beta regulator 4##AB023165|TBRG4|9238|transforming growth factor beta regulator 4##NM_004749|TBRG4|9238|transforming growth factor beta regulator 4##NM_030900|TBRG4|9238|transforming growth factor beta regulator 4##NM_199122|TBRG4|9238|transforming growth factor beta regulator 4##BC017235|TBRG4|9238|transforming growth factor beta regulator 4##BC014918|TBRG4|9238|transforming growth factor beta regulator 4##AK022575|TBRG4|9238|transforming growth factor beta regulator 4##AK222943|TBRG4|9238|transforming growth factor beta regulator 4##AF497515|ADCY1|107|adenylate cyclase 1 (brain)##NM_021116|ADCY1|107|adenylate cyclase 1 (brain)##AB209496|ADCY1|107|adenylate cyclase 1 (brain)##AL832059|SEPT7P2|641977|septin 7 pseudogene 2##BC092503|SEPT7P2|641977|septin 7 pseudogene 2	0.996417	CTCF.p2:3:0.996
chr4	38181392	38181542	reg1002246.p1	15.771	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-202450	+	AF095288 BC069114 BC069400 NM_006607	-219412	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-288678	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	484359	+	AF289565 TSC_hg19_v1_chr4_-_38666549	485022	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	603132	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.99965	CTCF.p2:-8:1.000
chr5	110493960	110494082	reg1001454.p1	15.769	+	AF385437 NM_139281 BC133025 BC136517 AK095312 TSC_hg19_v1_chr5_+_110428045 AL832494	-66062	+	AY037115 NM_033035	-86632	+	TSC_hg19_v1_chr5_+_110074741 AK300123 BC017169 NM_138773 M74089 AK290217 AB529063	-419241	+	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	65928	+	AK054566 NM_139164 TSC_hg19_v1_chr5_-_110848234 AK290312 AK310848 BC019632 AK125317 AK308851 AK315863 AK315869	354181	-	BC042956 TSC_hg19_v1_chr5_-_110848300	354273	-	AF385437|WDR36|134430|WD repeat domain 36##NM_139281|WDR36|134430|WD repeat domain 36##BC133025|WDR36|134430|WD repeat domain 36##BC136517|WDR36|134430|WD repeat domain 36##AK095312|WDR36|134430|WD repeat domain 36##AL832494|WDR36|134430|WD repeat domain 36##AY037115|TSLP|85480|thymic stromal lymphopoietin##NM_033035|TSLP|85480|thymic stromal lymphopoietin##AK300123|SLC25A46|91137|solute carrier family 25, member 46##BC017169|SLC25A46|91137|solute carrier family 25, member 46##NM_138773|SLC25A46|91137|solute carrier family 25, member 46##M74089|SLC25A46|91137|solute carrier family 25, member 46##AK290217|SLC25A46|91137|solute carrier family 25, member 46##L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK054566|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_139164|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK290312|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK310848|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC019632|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK125317|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK308851|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315863|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315869|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC042956|STARD4|134429|StAR-related lipid transfer (START) domain containing 4	0.18986	
chr15	67066794	67066922	reg1002277.p1	15.768	+	NM_001142861 U59914	-65929	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	-71299	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	-72184	+	TSC_hg19_v1_chr15_+_67358179 AK290881	291317	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	291543	+	NM_001145102 AK316017	351265	+	NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##AK290881|SMAD3|4088|SMAD family member 3##NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3	1.097939	CTCF.p2:4:0.996
chr16	14394816	14394928	reg1001347.p1	15.767	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-100674	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-114354	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-229786	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	329156	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	329261	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	331867	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.498261	CTCF.p2:-6:0.498
chr17	19241530	19241652	reg1002108.p1	15.765	+	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	-100883	+	BC157869 NM_001129778	-210810	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-291305	-	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	24378	-	TSC_hg19_v1_chr17_+_19281077 NM_139032 NM_139033 BC007404 BC007992 U29725 AK295376	39599	+	AK309320 NM_001243475	39903	-	NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1##NM_139032|MAPK7|5598|mitogen-activated protein kinase 7##NM_139033|MAPK7|5598|mitogen-activated protein kinase 7##BC007404|MAPK7|5598|mitogen-activated protein kinase 7##BC007992|MAPK7|5598|mitogen-activated protein kinase 7##U29725|MAPK7|5598|mitogen-activated protein kinase 7##AK295376|MAPK7|5598|mitogen-activated protein kinase 7##AK309320|B9D1|27077|B9 protein domain 1##NM_001243475|B9D1|27077|B9 protein domain 1	0.9956	CTCF.p2:8:0.996
chr1	15650151	15650279	reg1001413.p1	15.764	+	AK057963 NM_052929	-76448	+	TSC_hg19_v1_chr1_+_15480249 AK001061 NM_001136218 NM_018022 BC000593 BC005177 AK098467	-169967	+	AK129922 TSC_hg19_v1_chr1_+_15479310	-170911	+	TSC_hg19_v1_chr1_+_15736390 NM_024329	86185	+	BC068473 TSC_hg19_v1_chr1_+_15736425 BC007233 BC014923 BC023611	86220	+	BC015118 CR749296 NM_007272 AK289447 BC059779 S82198	114732	+	AK057963|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##NM_052929|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##AK001061|TMEM51|55092|transmembrane protein 51##NM_001136218|TMEM51|55092|transmembrane protein 51##NM_018022|TMEM51|55092|transmembrane protein 51##BC000593|TMEM51|55092|transmembrane protein 51##BC005177|TMEM51|55092|transmembrane protein 51##AK098467|TMEM51|55092|transmembrane protein 51##AK129922|TMEM51|55092|transmembrane protein 51##NM_024329|EFHD2|79180|EF-hand domain family, member D2##BC068473|EFHD2|79180|EF-hand domain family, member D2##BC007233|EFHD2|79180|EF-hand domain family, member D2##BC014923|EFHD2|79180|EF-hand domain family, member D2##BC023611|EFHD2|79180|EF-hand domain family, member D2##BC015118|CTRC|11330|chymotrypsin C (caldecrin)##CR749296|CTRC|11330|chymotrypsin C (caldecrin)##NM_007272|CTRC|11330|chymotrypsin C (caldecrin)##AK289447|CTRC|11330|chymotrypsin C (caldecrin)##BC059779|CTRC|11330|chymotrypsin C (caldecrin)##S82198|CTRC|11330|chymotrypsin C (caldecrin)	0.999951	CTCF.p2:4:1.000
chr20	43919632	43919769	reg1002255.p1	15.764	+	AF114471 X04503 AB464192 DQ891365 DQ894545 AK312192 X04470 TSC_hg19_v1_chr20_-_43883206 AX772818 BC020708 NM_003064	-36505	-	BC005262 M81652 NM_003008 AK312932 AX772816 BC056675 BC070306 AB464703	-69681	+	NM_003007 AK291811 BC005229 BC007096 BC011442 BC055416 J04440 AB591040 BT007177 CU691118	-84035	+	NM_014276 AB024964 AB026048 AB027710	15826	+	BC151219 AK074595 BC141811 AK074597 NM_003833 NM_030590 NM_030592	17242	-	CR542045 CR542074 DQ890718 DQ893898 AB464261 TSC_hg19_v1_chr20_-_43977065 X67016 AK222695 AK223243 AK303964 AK312507 BC030805 D13292 NM_002999	57355	-	AF114471|SLPI|6590|secretory leukocyte peptidase inhibitor##X04503|SLPI|6590|secretory leukocyte peptidase inhibitor##DQ891365|SLPI|6590|secretory leukocyte peptidase inhibitor##DQ894545|SLPI|6590|secretory leukocyte peptidase inhibitor##AK312192|SLPI|6590|secretory leukocyte peptidase inhibitor##X04470|SLPI|6590|secretory leukocyte peptidase inhibitor##AX772818|SLPI|6590|secretory leukocyte peptidase inhibitor##BC020708|SLPI|6590|secretory leukocyte peptidase inhibitor##NM_003064|SLPI|6590|secretory leukocyte peptidase inhibitor##BC005262|SEMG2|6407|semenogelin II##M81652|SEMG2|6407|semenogelin II##NM_003008|SEMG2|6407|semenogelin II##AK312932|SEMG2|6407|semenogelin II##BC056675|SEMG2|6407|semenogelin II##BC070306|SEMG2|6407|semenogelin II##NM_003007|SEMG1|6406|semenogelin I##BC005229|SEMG1|6406|semenogelin I##BC007096|SEMG1|6406|semenogelin I##BC011442|SEMG1|6406|semenogelin I##BC055416|SEMG1|6406|semenogelin I##J04440|SEMG1|6406|semenogelin I##BT007177|SEMG1|6406|semenogelin I##NM_014276|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB024964|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB026048|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB027710|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##BC151219|MATN4|8785|matrilin 4##AK074595|MATN4|8785|matrilin 4##BC141811|MATN4|8785|matrilin 4##AK074597|MATN4|8785|matrilin 4##NM_003833|MATN4|8785|matrilin 4##NM_030590|MATN4|8785|matrilin 4##NM_030592|MATN4|8785|matrilin 4##CR542045|SDC4|6385|syndecan 4##CR542074|SDC4|6385|syndecan 4##DQ890718|SDC4|6385|syndecan 4##DQ893898|SDC4|6385|syndecan 4##X67016|SDC4|6385|syndecan 4##AK222695|SDC4|6385|syndecan 4##AK223243|SDC4|6385|syndecan 4##AK303964|SDC4|6385|syndecan 4##AK312507|SDC4|6385|syndecan 4##BC030805|SDC4|6385|syndecan 4##D13292|SDC4|6385|syndecan 4##NM_002999|SDC4|6385|syndecan 4	0.989801	CTCF.p2:13:0.990
chr22	42337369	42337518	reg1001495.p2	15.764	+	EU035297 NM_001110215	-1221	-	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	-14644	-	NM_001207020	-26773	-	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	5680	-	TSC_hg19_v1_chr22_+_42372810 NM_019106 NM_145733 AK290037 AK299919 AL833942 BC111779 CR456572 AF285107 AF285108 AF285109	35465	+	AK128138 NM_152613 TSC_hg19_v1_chr22_+_42394808 AK129656 AK296138 BC022546 BC022549 BC038789 AK310980 CR456400 AB463345 CU012958 CU013246	57332	+	EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_001207020|SHISA8|440829|shisa homolog 8 (Xenopus laevis)##CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M##NM_019106|SEPT3|55964|septin 3##NM_145733|SEPT3|55964|septin 3##AK290037|SEPT3|55964|septin 3##AK299919|SEPT3|55964|septin 3##AL833942|SEPT3|55964|septin 3##BC111779|SEPT3|55964|septin 3##CR456572|SEPT3|55964|septin 3##AF285107|SEPT3|55964|septin 3##AF285108|SEPT3|55964|septin 3##AF285109|SEPT3|55964|septin 3##AK128138|WBP2NL|164684|WBP2 N-terminal like##NM_152613|WBP2NL|164684|WBP2 N-terminal like##AK129656|WBP2NL|164684|WBP2 N-terminal like##AK296138|WBP2NL|164684|WBP2 N-terminal like##BC022546|WBP2NL|164684|WBP2 N-terminal like##BC022549|WBP2NL|164684|WBP2 N-terminal like##CR456400|WBP2NL|164684|WBP2 N-terminal like	0.262201	CTCF.p2:20:0.262
chr5	173739096	173739208	reg1000930.p2	15.763	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-266400	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	-266441	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	-322962	+	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	412460	+	NM_000794	1132010	-	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	1166410	+	AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##NM_000794|DRD1|1812|dopamine receptor D1##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1	0.999931	CTCF.p2:2:1.000
chr2	99001654	99001778	reg1001261.p2	15.761	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-38811	+	DQ426863 NM_001079878 NM_001298 DQ067460	-39083	+	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	-298070	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	59642	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	223226	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	223334	+	DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B##AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)	0.892306	CTCF.p2:6:0.892
chr12	132638524	132638638	reg1001428.p1	15.760	+	TSC_hg19_v1_chr12_+_132629014 BC071958 CU687200 DQ892518 DQ895730 BC007893	-9525	+	TSC_hg19_v1_chr12_+_132629011 AK074489	-9571	+	TSC_hg19_v1_chr12_+_132629001 BC001191 NM_024078	-9588	+	AF458594 NM_021808	51991	-	BC069354 AB040672 NM_001122636 BC157845 BC171844	267276	-	NM_001142641	428575	+	BC071958|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ892518|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ895730|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC007893|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC001191|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##NM_024078|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001142641|FBRSL1|57666|fibrosin-like 1	0.979829	CTCF.p2:0:0.980
chr19	13172298	13172417	reg1001254.p2	15.759	+	HQ258405 TSC_hg19_v1_chr19_+_13135832 FJ861276 U07811	-36523	+	TSC_hg19_v1_chr19_+_13135745 L31881 BC117113 BC117115	-36597	+	TSC_hg19_v1_chr19_+_13135426 BX537794 AK295290	-36960	+	TSC_hg19_v1_chr19_+_13205957 BC036885	33633	+	TSC_hg19_v1_chr19_-_13213530 AK311530 M22637	41169	-	TSC_hg19_v1_chr19_-_13213673 BC002796	41340	-	HQ258405|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##FJ861276|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U07811|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC036885|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##M22637|LYL1|4066|lymphoblastic leukemia derived sequence 1##BC002796|LYL1|4066|lymphoblastic leukemia derived sequence 1	0.0	
chr10	69916263	69916389	reg1001958.p1	15.756	+	NM_032578 TSC_hg19_v1_chr10_+_69869249 AK027343 BX647637 AL832002 AL834247 BC142609 BC144333 BC144334	-46988	+	TSC_hg19_v1_chr10_-_69835055 NM_015601 NM_022079	-81219	-	BC039600 TSC_hg19_v1_chr10_-_69835041 AK026808 AY221963 AY650032 AY650033 AY650034	-81300	-	BC032621 NM_145178 AB593108 AB593109	75535	-	AK312275 AB528615 TSC_hg19_v1_chr10_-_70066624 AK092826 AX747753	150288	-	NM_012207 NM_021644 AK223441 AK291547 TSC_hg19_v1_chr10_+_70091820 BC039824 AX810704 AK295316 AF132361	175496	+	NM_032578|MYPN|84665|myopalladin##AK027343|MYPN|84665|myopalladin##BX647637|MYPN|84665|myopalladin##AL832002|MYPN|84665|myopalladin##AL834247|MYPN|84665|myopalladin##BC142609|MYPN|84665|myopalladin##BC144333|MYPN|84665|myopalladin##BC144334|MYPN|84665|myopalladin##NM_015601|HERC4|26091|hect domain and RLD 4##NM_022079|HERC4|26091|hect domain and RLD 4##BC039600|HERC4|26091|hect domain and RLD 4##AK026808|HERC4|26091|hect domain and RLD 4##AY221963|HERC4|26091|hect domain and RLD 4##AY650032|HERC4|26091|hect domain and RLD 4##AY650033|HERC4|26091|hect domain and RLD 4##AY650034|HERC4|26091|hect domain and RLD 4##BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)##NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)##AB593108|ATOH7|220202|atonal homolog 7 (Drosophila)##AB593109|ATOH7|220202|atonal homolog 7 (Drosophila)##AK312275|PBLD|64081|phenazine biosynthesis-like protein domain containing##AK092826|PBLD|64081|phenazine biosynthesis-like protein domain containing##NM_012207|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##NM_021644|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK223441|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK291547|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##BC039824|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK295316|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AF132361|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)	0.0	
chr18	12934582	12934703	reg1001986.p1	15.756	+	CU678897 AB590517 BC008244 TSC_hg19_v1_chr18_-_12884237 M25393 AK225706 AK290649 AK292570 BC016727 NM_001207013 NM_002828 NM_080422 NM_080423	-50406	-	TSC_hg19_v1_chr18_+_12703040 NM_020232 AK225882 AF168712 AK057005 BC013356 CU680576	-231606	+	TSC_hg19_v1_chr18_-_12702776 AK298223	-231878	-	TSC_hg19_v1_chr18_+_12947986 NM_001013437 NM_031216	13343	+	TSC_hg19_v1_chr18_+_12948009 AK314403	13364	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	13422	+	BC008244|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##M25393|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK225706|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK290649|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK292570|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##BC016727|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_001207013|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_002828|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_080422|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_080423|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_020232|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK225882|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AF168712|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK057005|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##BC013356|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK298223|CEP76|79959|centrosomal protein 76kDa##NM_001013437|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_031216|SEH1L|81929|SEH1-like (S. cerevisiae)##AK314403|SEH1L|81929|SEH1-like (S. cerevisiae)##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)	0.89067	CTCF.p2:19:0.891
chr2	27502876	27502990	reg1002039.p1	15.754	+	AK097736 NM_173650 AK311597 BC035194 AK302239	-4619	+	CU688460 DQ892115 DQ895310 U76010 TSC_hg19_v1_chr2_-_27485916 AK313600 BC028358 NM_003459	-17047	-	TSC_hg19_v1_chr2_+_27440342 D78586 AB384768	-62554	+	AK300699 NM_032546 NM_187841 AK311516	2365	+	BC104470 BC104471 NM_003353	28188	-	TSC_hg19_v1_chr2_-_27545948 AF088036 AK311549 X76538 NM_002437	43009	-	AK097736|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##NM_173650|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##BC035194|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##AK302239|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##DQ892115|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##DQ895310|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##U76010|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##AK313600|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##BC028358|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##NM_003459|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##D78586|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase##AK300699|TRIM54|57159|tripartite motif containing 54##NM_032546|TRIM54|57159|tripartite motif containing 54##NM_187841|TRIM54|57159|tripartite motif containing 54##BC104470|UCN|7349|urocortin##BC104471|UCN|7349|urocortin##NM_003353|UCN|7349|urocortin##AF088036|MPV17|4358|MpV17 mitochondrial inner membrane protein##X76538|MPV17|4358|MpV17 mitochondrial inner membrane protein##NM_002437|MPV17|4358|MpV17 mitochondrial inner membrane protein	0.9537	CTCF.p2:-4:0.954
chr18	57655474	57655601	reg1001946.p1	15.753	+	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-88308	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-290887	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	-290946	-	AK314130 NM_005912	384463	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1502237	+	AK096495 NM_173557	1904766	-	NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152	0.839526	CTCF.p2:-3:0.840
chr7	107786798	107786898	reg1000958.p1	15.753	+	BC142619 BC140804 BC144591 AF028816 AK300385 NM_007356	-16056	-	AB384752 TSC_hg19_v1_chr7_-_107643594 BC113455 M61916 BX648251 AK303501 AK309921 AK307611 BC044633 BC052598 NM_002291	-143243	-	AK300077 TSC_hg19_v1_chr7_+_107531630 AK225289 AK310220 AB209703 BC018648 BC018696 J03620 AB529125 CU676276	-255192	+	AJ001057 AB385311 NM_001037132	93704	-	TSC_hg19_v1_chr7_-_108096830 BC114570 BC115736 AB002341 BX538010 AK299870 BC098401 NM_001193582 NM_001193583 NM_001193584 NM_005010	310081	-	TSC_hg19_v1_chr7_-_108142934 BC005203 AK002115	356124	-	BC142619|LAMB4|22798|laminin, beta 4##BC140804|LAMB4|22798|laminin, beta 4##BC144591|LAMB4|22798|laminin, beta 4##AF028816|LAMB4|22798|laminin, beta 4##AK300385|LAMB4|22798|laminin, beta 4##NM_007356|LAMB4|22798|laminin, beta 4##BC113455|LAMB1|3912|laminin, beta 1##M61916|LAMB1|3912|laminin, beta 1##BX648251|LAMB1|3912|laminin, beta 1##AK303501|LAMB1|3912|laminin, beta 1##AK309921|LAMB1|3912|laminin, beta 1##AK307611|LAMB1|3912|laminin, beta 1##BC044633|LAMB1|3912|laminin, beta 1##BC052598|LAMB1|3912|laminin, beta 1##NM_002291|LAMB1|3912|laminin, beta 1##AK300077|DLD|1738|dihydrolipoamide dehydrogenase##AK225289|DLD|1738|dihydrolipoamide dehydrogenase##AK310220|DLD|1738|dihydrolipoamide dehydrogenase##AB209703|DLD|1738|dihydrolipoamide dehydrogenase##BC018648|DLD|1738|dihydrolipoamide dehydrogenase##BC018696|DLD|1738|dihydrolipoamide dehydrogenase##J03620|DLD|1738|dihydrolipoamide dehydrogenase##AJ001057|NRCAM|4897|neuronal cell adhesion molecule##NM_001037132|NRCAM|4897|neuronal cell adhesion molecule##BC114570|NRCAM|4897|neuronal cell adhesion molecule##BC115736|NRCAM|4897|neuronal cell adhesion molecule##AB002341|NRCAM|4897|neuronal cell adhesion molecule##BX538010|NRCAM|4897|neuronal cell adhesion molecule##AK299870|NRCAM|4897|neuronal cell adhesion molecule##BC098401|NRCAM|4897|neuronal cell adhesion molecule##NM_001193582|NRCAM|4897|neuronal cell adhesion molecule##NM_001193583|NRCAM|4897|neuronal cell adhesion molecule##NM_001193584|NRCAM|4897|neuronal cell adhesion molecule##NM_005010|NRCAM|4897|neuronal cell adhesion molecule##BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8##AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8	0.986508	CTCF.p2:19:0.987
chr2	70044200	70044326	reg1001952.p1	15.751	+	BC011659 TSC_hg19_v1_chr2_+_69969265 AK293406 AK303960 AK058017 AK315511 AK293396 M19383 M82809	-74998	+	BC063672 NM_001153 BC000182 TSC_hg19_v1_chr2_+_69969232 AK293177	-75093	+	NM_014911 TSC_hg19_v1_chr2_-_69871063 BC090950	-173171	-	AK024042 TSC_hg19_v1_chr2_+_70056791 BC007420 NM_178439 AK023119	12544	+	TSC_hg19_v1_chr2_+_70056924 AB527982 EU832645 EU832722 CU675651	12708	+	NM_006857 TSC_hg19_v1_chr2_+_70121093 BC017890 X76302 AK291128 AK312041 CU676102	76836	+	BC011659|ANXA4|307|annexin A4##AK293406|ANXA4|307|annexin A4##AK303960|ANXA4|307|annexin A4##AK058017|ANXA4|307|annexin A4##AK315511|ANXA4|307|annexin A4##AK293396|ANXA4|307|annexin A4##M19383|ANXA4|307|annexin A4##M82809|ANXA4|307|annexin A4##BC063672|ANXA4|307|annexin A4##NM_001153|ANXA4|307|annexin A4##BC000182|ANXA4|307|annexin A4##AK293177|ANXA4|307|annexin A4##NM_014911|AAK1|22848|AP2 associated kinase 1##BC090950|AAK1|22848|AP2 associated kinase 1##AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##EU832645|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##EU832722|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##NM_006857|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##BC017890|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##X76302|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##AK291128|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##AK312041|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)	0.316296	CTCF.p2:1:0.316
chr5	131836963	131837087	reg1001147.p1	15.751	+	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	-10544	-	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-90397	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-131517	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	42167	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	55615	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	156865	+	X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13	0.996928	CTCF.p2:32:0.997
chr6	124036529	124036670	reg1002556.p1	15.750	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	-78510	-	BC101377 BC101376 NM_001010852	-719019	+	TSC_hg19_v1_chr6_+_123317379 AK295158	-719216	+	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	88605	+	AK093417 AX748113 BC026087 NM_152553	1267912	+	TSC_hg19_v1_chr6_+_125474909 NM_001003396 NM_001003397 NM_003287 AK291866 U44427 BC002375 AK291872 AF208012 AK291887	1438340	+	U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##AK295158|CLVS2|134829|clavesin 2##NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217##NM_001003396|TPD52L1|7164|tumor protein D52-like 1##NM_001003397|TPD52L1|7164|tumor protein D52-like 1##NM_003287|TPD52L1|7164|tumor protein D52-like 1##AK291866|TPD52L1|7164|tumor protein D52-like 1##U44427|TPD52L1|7164|tumor protein D52-like 1##BC002375|TPD52L1|7164|tumor protein D52-like 1##AK291872|TPD52L1|7164|tumor protein D52-like 1##AF208012|TPD52L1|7164|tumor protein D52-like 1##AK291887|TPD52L1|7164|tumor protein D52-like 1	0.985399	CTCF.p2:4:0.985
chr5	95194552	95194677	reg1002097.p1	15.748	+	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	-36094	-	AF162769 BT006689 CR450312 CR542165 DQ892497 DQ895709 CU679866 D21238 AF069668 BC106075 X76648 TSC_hg19_v1_chr5_-_95158431 AK311868 BC005304 BC010965	-36214	-	TSC_hg19_v1_chr5_+_95067531 CU691986 AB385392	-127078	+	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	102884	-	TSC_hg19_v1_chr5_-_95297609 BC028412 NM_012081	103071	-	AK308575 NM_001177876	554074	-	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##AF162769|GLRX|2745|glutaredoxin (thioltransferase)##BT006689|GLRX|2745|glutaredoxin (thioltransferase)##CR450312|GLRX|2745|glutaredoxin (thioltransferase)##CR542165|GLRX|2745|glutaredoxin (thioltransferase)##DQ892497|GLRX|2745|glutaredoxin (thioltransferase)##DQ895709|GLRX|2745|glutaredoxin (thioltransferase)##D21238|GLRX|2745|glutaredoxin (thioltransferase)##AF069668|GLRX|2745|glutaredoxin (thioltransferase)##BC106075|GLRX|2745|glutaredoxin (thioltransferase)##X76648|GLRX|2745|glutaredoxin (thioltransferase)##AK311868|GLRX|2745|glutaredoxin (thioltransferase)##BC005304|GLRX|2745|glutaredoxin (thioltransferase)##BC010965|GLRX|2745|glutaredoxin (thioltransferase)##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2##BC028412|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_012081|ELL2|22936|elongation factor, RNA polymerase II, 2##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1	0.996007	CTCF.p2:-10:0.996
chr21	30744776	30744902	reg1001440.p1	15.747	+	AF026199 NM_206866	-73103	+	TSC_hg19_v1_chr21_+_30671242 AK313791 BC063307	-73598	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	-73619	+	L19058 NM_000830 NM_175611 AK296404 BC028238	567450	-	BC101503 BC101505 NM_012131 AY358094	794167	-	AB590283 CU676754 DQ892002 DQ895192 BC058004 AY358707 BC020866 AK223512 AK022269 NM_199328	843516	-	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AK313791|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC063307|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##L19058|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_000830|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_175611|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##AK296404|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC028238|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC101503|CLDN17|26285|claudin 17##BC101505|CLDN17|26285|claudin 17##NM_012131|CLDN17|26285|claudin 17##AY358094|CLDN17|26285|claudin 17##DQ892002|CLDN8|9073|claudin 8##DQ895192|CLDN8|9073|claudin 8##BC058004|CLDN8|9073|claudin 8##AY358707|CLDN8|9073|claudin 8##BC020866|CLDN8|9073|claudin 8##AK223512|CLDN8|9073|claudin 8##AK022269|CLDN8|9073|claudin 8##NM_199328|CLDN8|9073|claudin 8	0.999676	CTCF.p2:28:1.000
chr14	106023601	106023726	reg1002094.p1	15.744	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-30722	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-66027	+	BX248038 NM_001134877	-67144	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	68673	-	BC040042 TSC_hg19_v1_chr14_-_106110945	87260	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	87453	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.175024	
chr16	67581004	67581126	reg1002112.p1	15.744	+	BC041086 AK023787 TSC_hg19_v1_chr16_+_67573861 BC098587	-7201	+	AK097087 TSC_hg19_v1_chr16_+_67572105	-9021	+	TSC_hg19_v1_chr16_+_67571364 NM_001193524 BC021284 AK295677	-9678	+	AK314804 NM_001191022 NM_006565 TSC_hg19_v1_chr16_+_67596455 U25435 AB209793 BC014267	15329	+	TSC_hg19_v1_chr16_+_67679038 AB113647 NM_001013838	97961	+	TSC_hg19_v1_chr16_+_67679059 FJ026014 AL832446	98052	+	BC041086|FAM65A|79567|family with sequence similarity 65, member A##AK023787|FAM65A|79567|family with sequence similarity 65, member A##BC098587|FAM65A|79567|family with sequence similarity 65, member A##AK097087|FAM65A|79567|family with sequence similarity 65, member A##NM_001193524|FAM65A|79567|family with sequence similarity 65, member A##AK295677|FAM65A|79567|family with sequence similarity 65, member A##AK314804|CTCF|10664|CCCTC-binding factor (zinc finger protein)##NM_001191022|CTCF|10664|CCCTC-binding factor (zinc finger protein)##NM_006565|CTCF|10664|CCCTC-binding factor (zinc finger protein)##U25435|CTCF|10664|CCCTC-binding factor (zinc finger protein)##AB209793|CTCF|10664|CCCTC-binding factor (zinc finger protein)##BC014267|CTCF|10664|CCCTC-binding factor (zinc finger protein)##AB113647|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##NM_001013838|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##FJ026014|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##AL832446|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing	1.018897	CTCF.p2:-10:1.000
chr6	159555874	159556001	reg1001957.p1	15.744	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-89836	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-134716	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	-135118	-	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	34493	+	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	558313	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	558425	-	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial	0.983583	CTCF.p2:12:0.984
chr3	134513847	134513964	reg1001144.p1	15.743	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-144060	-	AK023448 BC068997 TSC_hg19_v1_chr3_+_134205041 NM_025180 AK056465	-308881	+	TSC_hg19_v1_chr3_+_134204899 NM_001042400	-309021	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	246	+	TSC_hg19_v1_chr3_+_134514301 BC111744	396	+	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	1170626	+	BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##AK023448|CEP63|80254|centrosomal protein 63kDa##BC068997|CEP63|80254|centrosomal protein 63kDa##NM_025180|CEP63|80254|centrosomal protein 63kDa##AK056465|CEP63|80254|centrosomal protein 63kDa##NM_001042400|CEP63|80254|centrosomal protein 63kDa##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC111744|EPHB1|2047|EPH receptor B1##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.577257	CTCF.p2:-12:0.577
chr3	167883564	167883676	reg1001157.p2	15.742	+	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	-70189	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	-70505	-	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-430131	+	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	980459	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	980742	-	BX640908 NM_001164000	981901	-	AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus	0.983802	CTCF.p2:12:0.984
chr3	46318145	46318270	reg1002421.p1	15.741	+	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	-34291	+	BC064991 TSC_hg19_v1_chr3_-_46249804 L10918 BC051306 NM_001295	-68398	-	AB189434 AB189435 NM_001024644 NM_005283	-249229	-	AK292685 NM_001123041 NM_001123396	77022	+	TSC_hg19_v1_chr3_+_46395601 AK292920 U03905	77400	+	NM_000579 NM_001100168	93425	+	NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##BC064991|CCR1|1230|chemokine (C-C motif) receptor 1##L10918|CCR1|1230|chemokine (C-C motif) receptor 1##BC051306|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001295|CCR1|1230|chemokine (C-C motif) receptor 1##AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2##AK292920|CCR2|729230|chemokine (C-C motif) receptor 2##U03905|CCR2|729230|chemokine (C-C motif) receptor 2##NM_000579|CCR5|1234|chemokine (C-C motif) receptor 5##NM_001100168|CCR5|1234|chemokine (C-C motif) receptor 5	0.594413	CTCF.p2:-8:0.578
chr8	61573190	61573311	reg1001963.p1	15.741	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-143500	+	TSC_hg19_v1_chr8_+_61429570 X12953 BC008929	-143686	+	TSC_hg19_v1_chr8_+_61429545 AK312344	-143704	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	18038	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	18152	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	627300	+	M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##X12953|RAB2A|5862|RAB2A, member RAS oncogene family##BC008929|RAB2A|5862|RAB2A, member RAS oncogene family##AK312344|RAB2A|5862|RAB2A, member RAS oncogene family##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1	0.0	
chr10	102098333	102098457	reg1001139.p1	15.740	+	AF073481 NM_001253837 NM_016112	-8153	-	AY531265 AB463442 TSC_hg19_v1_chr10_-_102046438 AB593084 AK298969 NM_173809	-51957	-	BC020494 AY278457 AK054697 NM_001001342	-52365	-	NM_005063 TSC_hg19_v1_chr10_+_102106877 AB032261 BC062303	8446	+	TSC_hg19_v1_chr10_+_102106989 AK312312	8580	+	TSC_hg19_v1_chr10_+_102107054 AB208982 AF097514 AK222862 Y13647	8634	+	AF073481|PKD2L1|9033|polycystic kidney disease 2-like 1##NM_001253837|PKD2L1|9033|polycystic kidney disease 2-like 1##NM_016112|PKD2L1|9033|polycystic kidney disease 2-like 1##AY531265|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AB593084|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AK298969|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_173809|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AK312312|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AB208982|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AF097514|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AK222862|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##Y13647|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	0.981148	CTCF.p2:-7:0.981
chr6	26066263	26066383	reg1001913.p1	15.740	+	TSC_hg19_v1_chr6_-_26056699 AB451259 AB451385 EU446960 EU832089 EU832181 AB590706 CU678090 BC002649 AK290947 D28457 NM_005319	-9647	-	BC058834 TSC_hg19_v1_chr6_+_26045611 BC127610 NM_003531	-20695	+	BC096728 EU446966 NM_021062	-22439	-	U60319 AJ249335 AJ249336 AJ249337 AJ249338 AJ250635 NM_000410 NM_139003 NM_139004 NM_139006 NM_139007 NM_139008 NM_139009 NM_139010 NM_139011 AF144242 AF144243 AF144244 AF144245 BC074721 AF149804 AF150664 TSC_hg19_v1_chr6_+_26087639 AF079407 AF079408 AF079409 BC117201 BC117203 BC143887 AK293393 AK316502 AF115265 AF115264 AK300933 HQ258197 JN375754	21254	+	BC130558 BC130560 TSC_hg19_v1_chr6_+_26104160 AB590707 EU446977 HQ258693 NM_003542	37816	+	EU446962 HQ258096 BC130350 BC069517 CU686878 NM_005323 TSC_hg19_v1_chr6_-_26108364	42019	-	AB451259|HIST1H1C|3006|histone cluster 1, H1c##AB451385|HIST1H1C|3006|histone cluster 1, H1c##EU446960|HIST1H1C|3006|histone cluster 1, H1c##EU832089|HIST1H1C|3006|histone cluster 1, H1c##EU832181|HIST1H1C|3006|histone cluster 1, H1c##BC002649|HIST1H1C|3006|histone cluster 1, H1c##AK290947|HIST1H1C|3006|histone cluster 1, H1c##NM_005319|HIST1H1C|3006|histone cluster 1, H1c##BC058834|HIST1H3C|8352|histone cluster 1, H3c##BC127610|HIST1H3C|8352|histone cluster 1, H3c##NM_003531|HIST1H3C|8352|histone cluster 1, H3c##BC096728|HIST1H2BB|3018|histone cluster 1, H2bb##EU446966|HIST1H2BB|3018|histone cluster 1, H2bb##NM_021062|HIST1H2BB|3018|histone cluster 1, H2bb##U60319|HFE|3077|hemochromatosis##AJ249335|HFE|3077|hemochromatosis##AJ249336|HFE|3077|hemochromatosis##AJ249337|HFE|3077|hemochromatosis##AJ249338|HFE|3077|hemochromatosis##AJ250635|HFE|3077|hemochromatosis##NM_000410|HFE|3077|hemochromatosis##NM_139003|HFE|3077|hemochromatosis##NM_139004|HFE|3077|hemochromatosis##NM_139006|HFE|3077|hemochromatosis##NM_139007|HFE|3077|hemochromatosis##NM_139008|HFE|3077|hemochromatosis##NM_139009|HFE|3077|hemochromatosis##NM_139010|HFE|3077|hemochromatosis##NM_139011|HFE|3077|hemochromatosis##AF144242|HFE|3077|hemochromatosis##AF144243|HFE|3077|hemochromatosis##AF144244|HFE|3077|hemochromatosis##AF144245|HFE|3077|hemochromatosis##BC074721|HFE|3077|hemochromatosis##AF149804|HFE|3077|hemochromatosis##AF150664|HFE|3077|hemochromatosis##AF079407|HFE|3077|hemochromatosis##AF079408|HFE|3077|hemochromatosis##AF079409|HFE|3077|hemochromatosis##BC117201|HFE|3077|hemochromatosis##BC117203|HFE|3077|hemochromatosis##BC143887|HFE|3077|hemochromatosis##AK293393|HFE|3077|hemochromatosis##AK316502|HFE|3077|hemochromatosis##AF115265|HFE|3077|hemochromatosis##AF115264|HFE|3077|hemochromatosis##AK300933|HFE|3077|hemochromatosis##HQ258197|HFE|3077|hemochromatosis##JN375754|HFE|3077|hemochromatosis##BC130558|HIST1H4C|8364|histone cluster 1, H4c##BC130560|HIST1H4C|8364|histone cluster 1, H4c##EU446977|HIST1H4C|8364|histone cluster 1, H4c##HQ258693|HIST2H4B|554313|histone cluster 2, H4b##NM_003542|HIST1H4C|8364|histone cluster 1, H4c##EU446962|HIST1H1T|3010|histone cluster 1, H1t##HQ258096|HIST1H1T|3010|histone cluster 1, H1t##BC130350|HIST1H1T|3010|histone cluster 1, H1t##BC069517|HIST1H1T|3010|histone cluster 1, H1t##NM_005323|HIST1H1T|3010|histone cluster 1, H1t	0.100505	
chr3	50609672	50609797	reg1002106.p1	15.739	+	AF188706 NM_001171741	-1295	-	TSC_hg19_v1_chr3_+_50606919 BX537562 NM_016173 AK314023 AF172244 AK124369	-2786	+	AK124438 AK311093 TSC_hg19_v1_chr3_-_50605192 BC034766 AK313128 AK308074 AK309486 AL833938 AK130227 NM_001171740 NM_001171743 NM_016210	-4591	-	CU689192 AB528903 BC064354 TSC_hg19_v1_chr3_-_50649104	39358	-	TSC_hg19_v1_chr3_-_50649206 AF035947 D83532 BC031590 AF132297 AK313850 NM_013324 NM_145071	39483	-	NM_001243926 BC068497	39581	+	AF188706|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171741|C3orf18|51161|chromosome 3 open reading frame 18##BX537562|HEMK1|51409|HemK methyltransferase family member 1##NM_016173|HEMK1|51409|HemK methyltransferase family member 1##AK314023|HEMK1|51409|HemK methyltransferase family member 1##AF172244|HEMK1|51409|HemK methyltransferase family member 1##AK124369|HEMK1|51409|HemK methyltransferase family member 1##AK124438|C3orf18|51161|chromosome 3 open reading frame 18##AK311093|C3orf18|51161|chromosome 3 open reading frame 18##BC034766|C3orf18|51161|chromosome 3 open reading frame 18##AK313128|C3orf18|51161|chromosome 3 open reading frame 18##AK308074|C3orf18|51161|chromosome 3 open reading frame 18##AK309486|C3orf18|51161|chromosome 3 open reading frame 18##AL833938|C3orf18|51161|chromosome 3 open reading frame 18##AK130227|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171740|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171743|C3orf18|51161|chromosome 3 open reading frame 18##NM_016210|C3orf18|51161|chromosome 3 open reading frame 18##BC064354|CISH|1154|cytokine inducible SH2-containing protein##AF035947|CISH|1154|cytokine inducible SH2-containing protein##D83532|CISH|1154|cytokine inducible SH2-containing protein##BC031590|CISH|1154|cytokine inducible SH2-containing protein##AF132297|CISH|1154|cytokine inducible SH2-containing protein##AK313850|CISH|1154|cytokine inducible SH2-containing protein##NM_013324|CISH|1154|cytokine inducible SH2-containing protein##NM_145071|CISH|1154|cytokine inducible SH2-containing protein##NM_001243926|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC068497|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3	0.995407	CTCF.p2:-15:0.995
chr14	70285547	70285652	reg1001567.p1	15.738	+	CU687020 HQ258189 BC074724 BC126298 BC136355 AY544127 BC069822 BC069799 L21893 AK314028 NM_003049	-21661	-	AF070562 TSC_hg19_v1_chr14_+_70236305	-49312	+	TSC_hg19_v1_chr14_+_70233881 BX247988 U30826 U30827 U30884	-51710	+	NM_001034852 NM_022137 TSC_hg19_v1_chr14_+_70346132 AK289988 AK313063 AJ249900 BC011548 BC008608	60530	+	AK096553 AJ745101 AJ745102 BC114217 NM_182936 AK122728 BC142969 NM_001130417	261293	-	BC036783 BX248763 TSC_hg19_v1_chr14_-_70655669 AF510501 AF510502 AF510503 NM_033262 NM_058240 NM_182932 NM_183002	370088	-	HQ258189|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC074724|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC126298|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC136355|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AY544127|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC069822|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC069799|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##L21893|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AK314028|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##NM_003049|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AF070562|SRSF5|6430|serine/arginine-rich splicing factor 5##BX247988|SRSF5|6430|serine/arginine-rich splicing factor 5##U30826|SRSF5|6430|serine/arginine-rich splicing factor 5##U30827|SRSF5|6430|serine/arginine-rich splicing factor 5##U30884|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_001034852|SMOC1|64093|SPARC related modular calcium binding 1##NM_022137|SMOC1|64093|SPARC related modular calcium binding 1##AK289988|SMOC1|64093|SPARC related modular calcium binding 1##AK313063|SMOC1|64093|SPARC related modular calcium binding 1##AJ249900|SMOC1|64093|SPARC related modular calcium binding 1##BC011548|SMOC1|64093|SPARC related modular calcium binding 1##BC008608|SMOC1|64093|SPARC related modular calcium binding 1##AK096553|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745101|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745102|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC114217|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182936|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AK122728|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC142969|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_001130417|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC036783|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BX248763|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510501|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510502|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510503|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_033262|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_058240|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182932|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_183002|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3	0.999857	CTCF.p2:0:1.000
chr2	180083861	180083981	reg1002169.p1	15.737	+	AL832777 NM_173648	-169136	-	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-411818	-	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	-424220	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	45484	-	AK057999 NM_001113398	343393	-	AK096822 NM_001113397	526847	-	AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##X98114|TTN|7273|titin##X98115|TTN|7273|titin##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B##AK096822|ZNF385B|151126|zinc finger protein 385B##NM_001113397|ZNF385B|151126|zinc finger protein 385B	0.95797	CTCF.p2:-11:0.958
chr6	161351851	161351978	reg1001931.p1	15.736	+	NM_000301 NM_001168338 AK308036 AK312966 AK298338 X05199 M74220 BC060513	-228653	+	NM_005577	-264508	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	-582520	+	TSC_hg19_v1_chr6_+_161412797 BC146770 D86968	60828	+	TSC_hg19_v1_chr6_+_161412815 AF002715 NM_005922 NM_006724	60900	+	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	60944	+	NM_000301|PLG|5340|plasminogen##NM_001168338|PLG|5340|plasminogen##AK308036|PLG|5340|plasminogen##AK312966|PLG|5340|plasminogen##AK298338|PLG|5340|plasminogen##X05199|PLG|5340|plasminogen##M74220|PLG|5340|plasminogen##BC060513|PLG|5340|plasminogen##NM_005577|LPA|4018|lipoprotein, Lp(a)##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##BC146770|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##D86968|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AF002715|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_005922|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_006724|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4	1.530157	CTCF.p2:-18:0.994	CTCF.p2:88:0.536
chr11	20132533	20132659	reg1002221.p1	15.735	+	AK290458 TSC_hg19_v1_chr11_+_20070637	-61973	+	TSC_hg19_v1_chr11_+_20049136 AK307574	-83464	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	-88208	+	NM_001029865	49273	-	NM_006410 TSC_hg19_v1_chr11_+_20385245 NM_001098521	252646	+	TSC_hg19_v1_chr11_+_20385268 AK292092 NM_001098520	252685	+	AK290458|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##NM_001029865|DBX1|120237|developing brain homeobox 1##NM_006410|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098521|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AK292092|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098520|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa	0.907903	CTCF.p2:17:0.908
chr2	231852034	231852167	reg1002045.p1	15.734	+	BC032694 NM_005683	-62160	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-122378	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-122422	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	8792	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	50137	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	69477	+	BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	1.015382	CTCF.p2:16:1.000
chr10	12698642	12698772	reg1002068.p1	15.733	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-306930	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-306990	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	-307132	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	344992	-	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	443438	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	504861	+	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10	0.982669	CTCF.p2:13:0.983
chr17	57518260	57518390	reg1002123.p1	15.732	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	-109307	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	-220427	+	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	-230928	+	AF461690 NM_001166301 NM_024612 TSC_hg19_v1_chr17_+_57642970 BC024187 AK299151 AK095681 AF260270 AK226048 AB384723 DQ890909 DQ894060	124662	+	TSC_hg19_v1_chr17_+_57697037 NM_004859	178720	+	TSC_hg19_v1_chr17_+_57697265 BC054489 BX640615	178945	+	NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)##NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_004859|CLTC|1213|clathrin, heavy chain (Hc)##BC054489|CLTC|1213|clathrin, heavy chain (Hc)##BX640615|CLTC|1213|clathrin, heavy chain (Hc)	0.9981	CTCF.p2:14:0.998
chr1	2313303	2313411	reg1000906.p1	15.731	+	NM_003036 X15218 TSC_hg19_v1_chr1_+_2160159	-153188	+	AK127994 NM_001146310	-174186	-	TSC_hg19_v1_chr1_-_2126212 BC041041 AF469129 BC066360 AK055593 BC103992 NM_182533	-187178	-	TSC_hg19_v1_chr1_-_2322994 AK024003 NM_024848	9635	-	TSC_hg19_v1_chr1_-_2322997 AK299217 AK310323 BC021704	9713	-	TSC_hg19_v1_chr1_+_2323265 NM_007033 AF157324	9878	+	NM_003036|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##X15218|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##AK127994|C1orf86|199990|chromosome 1 open reading frame 86##NM_001146310|C1orf86|199990|chromosome 1 open reading frame 86##BC041041|C1orf86|199990|chromosome 1 open reading frame 86##AF469129|C1orf86|199990|chromosome 1 open reading frame 86##BC066360|C1orf86|199990|chromosome 1 open reading frame 86##AK055593|C1orf86|199990|chromosome 1 open reading frame 86##BC103992|C1orf86|199990|chromosome 1 open reading frame 86##NM_182533|C1orf86|199990|chromosome 1 open reading frame 86##AK024003|MORN1|79906|MORN repeat containing 1##NM_024848|MORN1|79906|MORN repeat containing 1##AK299217|MORN1|79906|MORN repeat containing 1##AK310323|MORN1|79906|MORN repeat containing 1##BC021704|MORN1|79906|MORN repeat containing 1##NM_007033|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##AF157324|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)	0.999025	CTCF.p2:6:0.999
chr2	149874043	149874164	reg1001816.p1	15.731	+	TSC_hg19_v1_chr2_+_149633176 AB384491	-240924	+	BC017298 TSC_hg19_v1_chr2_+_149632844	-241263	+	TSC_hg19_v1_chr2_+_149632795 NM_004522 BC002721 BC025961 AB011103	-241307	+	BC040176 NM_177964	20877	+	AK124733 NM_001195685	312395	+	NM_194317 TSC_hg19_v1_chr2_+_150187114 AY358623 AK309248	312999	+	BC017298|KIF5C|3800|kinesin family member 5C##NM_004522|KIF5C|3800|kinesin family member 5C##BC002721|KIF5C|3800|kinesin family member 5C##BC025961|KIF5C|3800|kinesin family member 5C##AB011103|KIF5C|3800|kinesin family member 5C##BC040176|LYPD6B|130576|LY6/PLAUR domain containing 6B##NM_177964|LYPD6B|130576|LY6/PLAUR domain containing 6B##AK124733|LYPD6|130574|LY6/PLAUR domain containing 6##NM_001195685|LYPD6|130574|LY6/PLAUR domain containing 6##NM_194317|LYPD6|130574|LY6/PLAUR domain containing 6##AY358623|LYPD6|130574|LY6/PLAUR domain containing 6##AK309248|LYPD6|130574|LY6/PLAUR domain containing 6	0.999598	CTCF.p2:-10:1.000
chr2	202228799	202228907	reg1001298.p2	15.727	+	AK124115 BC031603 NM_001127391 NM_139163 AK292283	-6760	-	NM_033356 X98173	-103597	+	NM_001080125 AF422926 BC068050 AF422925 AF422929 X98172 AY429525	-106056	+	TSC_hg19_v1_chr2_-_202316179 AK314384 AK054763	87294	-	TSC_hg19_v1_chr2_-_202316274 AB038951 BC040668 BC041330 BC048093 NM_015049 AL832573	87435	-	AK027637 NM_001206864 NM_018571 TSC_hg19_v1_chr2_+_202316442 AK290457 BC008302 AY093697 AB038950 BC090871	87619	+	AK124115|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##BC031603|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_001127391|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_139163|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##AK292283|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_033356|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98173|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001080125|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422926|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC068050|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422929|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98172|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK314384|TRAK2|66008|trafficking protein, kinesin binding 2##AK054763|TRAK2|66008|trafficking protein, kinesin binding 2##AB038951|TRAK2|66008|trafficking protein, kinesin binding 2##BC040668|TRAK2|66008|trafficking protein, kinesin binding 2##BC041330|TRAK2|66008|trafficking protein, kinesin binding 2##BC048093|TRAK2|66008|trafficking protein, kinesin binding 2##NM_015049|TRAK2|66008|trafficking protein, kinesin binding 2##AL832573|TRAK2|66008|trafficking protein, kinesin binding 2##AK027637|STRADB|55437|STE20-related kinase adaptor beta##NM_001206864|STRADB|55437|STE20-related kinase adaptor beta##NM_018571|STRADB|55437|STE20-related kinase adaptor beta##AK290457|STRADB|55437|STE20-related kinase adaptor beta##BC008302|STRADB|55437|STE20-related kinase adaptor beta##AY093697|STRADB|55437|STE20-related kinase adaptor beta##AB038950|STRADB|55437|STE20-related kinase adaptor beta##BC090871|STRADB|55437|STE20-related kinase adaptor beta	0.926889	CTCF.p2:4:0.927
chr3	186258423	186258542	reg1001118.p2	15.726	+	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	-178548	-	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	-431626	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	-432136	-	CU686840 AF161703 BC069478 AK314172 NM_017541	3658	-	TSC_hg19_v1_chr3_-_186285118 AK001422 BC025748	26626	-	NM_018138 TSC_hg19_v1_chr3_-_186285140	26659	-	BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa##BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##AF161703|CRYGS|1427|crystallin, gamma S##BC069478|CRYGS|1427|crystallin, gamma S##AK314172|CRYGS|1427|crystallin, gamma S##NM_017541|CRYGS|1427|crystallin, gamma S##AK001422|TBCCD1|55171|TBCC domain containing 1##BC025748|TBCCD1|55171|TBCC domain containing 1##NM_018138|TBCCD1|55171|TBCC domain containing 1	0.998976	CTCF.p2:0:0.999
chr4	10016933	10017057	reg1001660.p1	15.726	+	NM_000798	-233738	+	AF529414 NM_001040448	-570736	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-652142	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	6129	-	AK310895 BC018897 NM_001001290 AK096819	24927	-	TSC_hg19_v1_chr4_-_10118286 AB385044 CU674086 CU677992	101292	-	NM_000798|DRD5|1816|dopamine receptor D5##AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.987567	CTCF.p2:11:0.988
chr1	21861412	21861534	reg1002291.p1	15.725	+	TSC_hg19_v1_chr1_+_21835918 AK295608 AK312667 AK298085 BC021289 BC066116 BC090861 AB011406 AH007388 X95994 AK293184 BC110909	-25541	+	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	-25614	+	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	-94791	+	AB003930 TSC_hg19_v1_chr1_-_21949064	87564	-	BC054490 TSC_hg19_v1_chr1_-_21978334 NM_001145658	116874	-	AB007943 M64788 TSC_hg19_v1_chr1_-_21995851 NM_001145657 NM_002885	134360	-	AK295608|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK312667|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK298085|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC021289|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC066116|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC090861|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB011406|ALPL|249|alkaline phosphatase, liver/bone/kidney##X95994|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK293184|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC110909|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein##BC054490|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145658|RAP1GAP|5909|RAP1 GTPase activating protein##AB007943|RAP1GAP|5909|RAP1 GTPase activating protein##M64788|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145657|RAP1GAP|5909|RAP1 GTPase activating protein##NM_002885|RAP1GAP|5909|RAP1 GTPase activating protein	0.894796	CTCF.p2:-3:0.895
chr6	134962197	134962324	reg1002298.p1	15.725	+	TSC_hg19_v1_chr6_+_134758857 AK055166	-203412	+	AK055077 NM_001143676	-323065	-	TSC_hg19_v1_chr6_-_134498984 FM205708 AK293383 NM_001143677	-463268	-	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	308972	-	CU674720 EU831981 EU832074 TSC_hg19_v1_chr6_-_135375948 BC040849 AJ420551 BC001465	413628	-	TSC_hg19_v1_chr6_-_135375958 AK024258 AK295545 AF161394 U87791 AJ459826 AJ459827 NM_001145158 NM_001145207 NM_006620	413734	-	AK055166|LOC154092|154092|uncharacterized LOC154092##AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)##EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)##BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)##BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)##AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)##AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)##AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)##U87791|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)	0.951989	CTCF.p2:1:0.952
chr9	140420275	140420395	reg1001436.p2	15.723	+	AY255128 AY255129 AY255130 AY255131 AY255132 NM_001130969 NM_001130970 NM_001130971 NM_001178064 NM_015537 TSC_hg19_v1_chr9_-_140353787	-66533	-	TSC_hg19_v1_chr9_-_140353758 AK074602 BC072412	-66575	-	TSC_hg19_v1_chr9_-_140353612 BC110498	-66703	-	AK125060 AK126267 TSC_hg19_v1_chr9_-_140444881 NM_001098537 NM_152286	24575	-	NM_032477 TSC_hg19_v1_chr9_+_140446353 BC040035 AY232291	26024	+	CU675946 TSC_hg19_v1_chr9_-_140473350 AK307180 BC003123 BC016349 BC017335	52955	-	AY255128|NELF|26012|nasal embryonic LHRH factor##AY255129|NELF|26012|nasal embryonic LHRH factor##AY255130|NELF|26012|nasal embryonic LHRH factor##AY255131|NELF|26012|nasal embryonic LHRH factor##AY255132|NELF|26012|nasal embryonic LHRH factor##NM_001130969|NELF|26012|nasal embryonic LHRH factor##NM_001130970|NELF|26012|nasal embryonic LHRH factor##NM_001130971|NELF|26012|nasal embryonic LHRH factor##NM_001178064|NELF|26012|nasal embryonic LHRH factor##NM_015537|NELF|26012|nasal embryonic LHRH factor##AK074602|NELF|26012|nasal embryonic LHRH factor##BC072412|NELF|26012|nasal embryonic LHRH factor##BC110498|NELF|26012|nasal embryonic LHRH factor##AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7##AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_032477|MRPL41|64975|mitochondrial ribosomal protein L41##BC040035|MRPL41|64975|mitochondrial ribosomal protein L41##AY232291|MRPL41|64975|mitochondrial ribosomal protein L41##AK307180|WDR85|92715|WD repeat domain 85##BC003123|WDR85|92715|WD repeat domain 85##BC016349|WDR85|92715|WD repeat domain 85##BC017335|WDR85|92715|WD repeat domain 85	0.694153	CTCF.p2:8:0.694
chr5	140904434	140904578	reg1001427.p2	15.722	+	AL050086 TSC_hg19_v1_chr5_-_140895550	-9024	-	TSC_hg19_v1_chr5_+_140868721 BC112081 BC112083 AF152339 AF152526 NM_018929 NM_032407	-35742	+	TSC_hg19_v1_chr5_+_140864626 BC042650 AF152338 AF152525 BC101035 BC101037 BC101038 NM_018928 NM_032406 BC101036	-39822	+	AF051782 AY363395 AB384958 DQ067453 TSC_hg19_v1_chr5_-_140998497 BC117257 BC143413 BC143414	93992	-	TSC_hg19_v1_chr5_-_140998562 AB209482	94055	-	TSC_hg19_v1_chr5_-_140998564 AK304291	94058	-	AL050086|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC112081|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC112083|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152339|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152526|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_018929|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_032407|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF051782|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AY363395|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##DQ067453|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC117257|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143413|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143414|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AB209482|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AK304291|DIAPH1|1729|diaphanous homolog 1 (Drosophila)	1.071834	CTCF.p2:-39:0.999
chr1	93459772	93459910	reg1001841.p1	15.721	+	TSC_hg19_v1_chr1_-_93427020 BC070342 NM_001006605 NM_001252269 NM_001252270 NM_001252273	-32803	-	TSC_hg19_v1_chr1_-_93399531 BX648424	-60249	-	NM_001252271	-117135	-	TSC_hg19_v1_chr1_+_93544836 NM_001164391 NM_001164392 NM_001164393 NM_007358 AK290318 AK302900 AJ010014 AK302776 AF086908 BC010013 BC001897	84992	+	AY359039 BC016556 AF151858 TSC_hg19_v1_chr1_-_93645971 AK293308 BC016365 AK312787 CR936808 AK125882	186146	-	BC070051 NM_001167830 NM_016040	186404	-	BC070342|FAM69A|388650|family with sequence similarity 69, member A##NM_001006605|FAM69A|388650|family with sequence similarity 69, member A##NM_001252269|FAM69A|388650|family with sequence similarity 69, member A##NM_001252270|FAM69A|388650|family with sequence similarity 69, member A##NM_001252273|FAM69A|388650|family with sequence similarity 69, member A##NM_001252271|FAM69A|388650|family with sequence similarity 69, member A##NM_001164391|MTF2|22823|metal response element binding transcription factor 2##NM_001164392|MTF2|22823|metal response element binding transcription factor 2##NM_001164393|MTF2|22823|metal response element binding transcription factor 2##NM_007358|MTF2|22823|metal response element binding transcription factor 2##AK290318|MTF2|22823|metal response element binding transcription factor 2##AK302900|MTF2|22823|metal response element binding transcription factor 2##AJ010014|MTF2|22823|metal response element binding transcription factor 2##AK302776|MTF2|22823|metal response element binding transcription factor 2##AF086908|MTF2|22823|metal response element binding transcription factor 2##BC010013|MTF2|22823|metal response element binding transcription factor 2##BC001897|MTF2|22823|metal response element binding transcription factor 2##AY359039|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016556|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AF151858|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK293308|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016365|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK312787|TMED5|50999|transmembrane emp24 protein transport domain containing 5##CR936808|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK125882|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC070051|TMED5|50999|transmembrane emp24 protein transport domain containing 5##NM_001167830|TMED5|50999|transmembrane emp24 protein transport domain containing 5##NM_016040|TMED5|50999|transmembrane emp24 protein transport domain containing 5	0.9994	CTCF.p2:22:0.999
chr2	217531445	217531565	reg1001919.p1	15.720	+	TSC_hg19_v1_chr2_+_217498216 DQ893450 EU176752	-33207	+	TSC_hg19_v1_chr2_+_217498142 NM_000597 X16302 BC071967 AB209509 BC004312 BC009902 BC012769 M35410	-33369	+	NM_000998 TSC_hg19_v1_chr2_+_217363566 AK289472 BC016748 BC067789 L22154 AK023419 AK291857 BC063476 L06499 BC014262 BC082239 BC047872	-167952	+	L27560 AF147308 TSC_hg19_v1_chr2_-_217540846	9279	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	28061	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	28755	-	DQ893450|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##EU176752|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##NM_000998|RPL37A|6168|ribosomal protein L37a##AK289472|RPL37A|6168|ribosomal protein L37a##BC016748|RPL37A|6168|ribosomal protein L37a##BC067789|RPL37A|6168|ribosomal protein L37a##L22154|RPL37A|6168|ribosomal protein L37a##AK023419|RPL37A|6168|ribosomal protein L37a##AK291857|RPL37A|6168|ribosomal protein L37a##BC063476|RPL37A|6168|ribosomal protein L37a##L06499|RPL37A|6168|ribosomal protein L37a##BC014262|RPL37A|6168|ribosomal protein L37a##BC082239|RPL37A|6168|ribosomal protein L37a##BC047872|RPL37A|6168|ribosomal protein L37a##L27560|IGFBP5|3488|insulin-like growth factor binding protein 5##AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5	0.079218	
chr7	77669621	77669743	reg1002511.p1	15.720	+	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-200173	+	BC067742 TSC_hg19_v1_chr7_+_77428204 AL136883	-241472	+	TSC_hg19_v1_chr7_+_77428194 NM_001127358 NM_001127360 AK225854 AK090643 AX746556 AK308289	-241541	+	AB014605 BC150277 AK297353 AF038563 NM_012301	1413197	-	TSC_hg19_v1_chr7_+_79083303 AK311103	1413475	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	2094457	+	BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##BC067742|PHTF2|57157|putative homeodomain transcription factor 2##AL136883|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2##AK225854|PHTF2|57157|putative homeodomain transcription factor 2##AK090643|PHTF2|57157|putative homeodomain transcription factor 2##AK308289|PHTF2|57157|putative homeodomain transcription factor 2##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1	0.994891	CTCF.p2:12:0.995
chr8	53878501	53878645	reg1002042.p1	15.720	+	BC069117 BC107101 NM_005285	-26106	+	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	-251560	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	-251587	-	BC099912 AK310407 AY168006 NM_000912 AY466378	285639	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	877106	-	AK022345 TSC_hg19_v1_chr8_-_54755834	877254	-	BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1##BC099912|OPRK1|4986|opioid receptor, kappa 1##AK310407|OPRK1|4986|opioid receptor, kappa 1##AY168006|OPRK1|4986|opioid receptor, kappa 1##NM_000912|OPRK1|4986|opioid receptor, kappa 1##AY466378|OPRK1|4986|opioid receptor, kappa 1##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H	0.985448	CTCF.p2:-2:0.985
chr4	78016649	78016753	reg1001433.p1	15.717	+	TSC_hg19_v1_chr4_-_77997145 BC000420 BC004975 NM_006835 AB209766 AK301111 AK312632	-19549	-	AK124592 CR627457 TSC_hg19_v1_chr4_+_77954068	-62696	+	TSC_hg19_v1_chr4_+_77871005 AK001711 AL110300 AK302700 BC063615 GU727629 AB587498	-145701	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	61660	+	TSC_hg19_v1_chr4_+_78078398 U47414	61759	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	62792	+	BC000420|CCNI|10983|cyclin I##BC004975|CCNI|10983|cyclin I##NM_006835|CCNI|10983|cyclin I##AB209766|CCNI|10983|cyclin I##AK301111|CCNI|10983|cyclin I##AK312632|CCNI|10983|cyclin I##AK124592|SEPT11|55752|septin 11##AK001711|SEPT11|55752|septin 11##AL110300|SEPT11|55752|septin 11##AK302700|SEPT11|55752|septin 11##BC063615|SEPT11|55752|septin 11##GU727629|SEPT11|55752|septin 11##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2	0.212999	CTCF.p2:-9:0.213
chr17	73901153	73901299	reg1001266.p1	15.714	+	TSC_hg19_v1_chr17_-_73901175 NM_032478	-61	-	BC034460 TSC_hg19_v1_chr17_-_73900966 BC013311 AK313283	-239	-	TSC_hg19_v1_chr17_-_73893051 BC021259 NM_173547	-8163	-	BC023549 TSC_hg19_v1_chr17_-_73937123 NM_001080542 AK074045	35936	-	AK296409 U07866 AM393156 X71440 BX537380 AK308218 TSC_hg19_v1_chr17_-_73975216 S69189 AK291793 AK300447 AK292965 AK225897 BC010425	73975	-	NM_001113324 BC047782 TSC_hg19_v1_chr17_+_73975332 BX647274 BX648576 AK097104	74096	+	NM_032478|MRPL38|64978|mitochondrial ribosomal protein L38##BC034460|MRPL38|64978|mitochondrial ribosomal protein L38##BC013311|MRPL38|64978|mitochondrial ribosomal protein L38##AK313283|MRPL38|64978|mitochondrial ribosomal protein L38##BC021259|TRIM65|201292|tripartite motif containing 65##NM_173547|TRIM65|201292|tripartite motif containing 65##BC023549|FBF1|85302|Fas (TNFRSF6) binding factor 1##NM_001080542|FBF1|85302|Fas (TNFRSF6) binding factor 1##AK074045|FBF1|85302|Fas (TNFRSF6) binding factor 1##AK296409|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##U07866|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##AM393156|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##X71440|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##BX537380|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##AK308218|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##S69189|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##AK291793|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##AK300447|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##AK292965|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##AK225897|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##BC010425|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##NM_001113324|TEN1|100134934|TEN1 telomerase capping complex subunit homolog (S. cerevisiae)##BC047782|TEN1|100134934|TEN1 telomerase capping complex subunit homolog (S. cerevisiae)##BX647274|TEN1-CDK3|100529145|TEN1-CDK3 readthrough##BX648576|TEN1|100134934|TEN1 telomerase capping complex subunit homolog (S. cerevisiae)##AK097104|TEN1-CDK3|100529145|TEN1-CDK3 readthrough	0.999951	CTCF.p2:10:1.000
chr9	135675634	135675763	reg1001517.p1	15.714	+	AF142328 NM_012204 TSC_hg19_v1_chr9_+_135545875 BC094774 BC011619 BC022787 BC104755 BC112245 AB529214	-129842	+	AF335567 AF335568 AF335569 AF427339 AK027484 NM_022779 NM_138620	-129911	-	TSC_hg19_v1_chr9_+_135545447 BC060821	-130280	+	TSC_hg19_v1_chr9_+_135753719 BC012940	78070	+	BC037402 BC050576 NM_152572	78482	-	AK075259 AJ011375 NM_018956	78588	+	AF142328|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##NM_012204|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC094774|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC011619|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC022787|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC104755|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC112245|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##AF335567|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF335568|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF335569|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF427339|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK027484|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##NM_022779|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##NM_138620|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC060821|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC012940|C9orf9|11092|chromosome 9 open reading frame 9##BC037402|AK8|158067|adenylate kinase 8##BC050576|AK8|158067|adenylate kinase 8##NM_152572|AK8|158067|adenylate kinase 8##AK075259|C9orf9|11092|chromosome 9 open reading frame 9##AJ011375|C9orf9|11092|chromosome 9 open reading frame 9##NM_018956|C9orf9|11092|chromosome 9 open reading frame 9	0.997098	CTCF.p2:18:0.997
chr2	84722809	84722942	reg1001259.p1	15.710	+	NM_003849	-36290	-	AK296741 TSC_hg19_v1_chr2_-_84686396	-36480	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	-36505	-	TSC_hg19_v1_chr2_+_84743576 AK094676 NM_001370	20702	+	TSC_hg19_v1_chr2_-_85108209 AK296608 AK309615	385332	-	TSC_hg19_v1_chr2_-_85108241 NM_001080824 BC051789	385428	-	NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6##AK296608|C2orf89|129293|chromosome 2 open reading frame 89##AK309615|C2orf89|129293|chromosome 2 open reading frame 89##NM_001080824|C2orf89|129293|chromosome 2 open reading frame 89##BC051789|C2orf89|129293|chromosome 2 open reading frame 89	0.764497	CTCF.p2:-20:0.764
chr1	36886515	36886641	reg1001903.p1	15.709	+	AF394685 TSC_hg19_v1_chr1_-_36863508 AF166092 BC007623 NM_032881	-23085	-	TSC_hg19_v1_chr1_-_36851517 AK075048	-35055	-	AL834137 NM_032017 BC008344 TSC_hg19_v1_chr1_-_36851499 BC007835 AY198395	-35087	-	AB079075 AK098541 BC018069 NM_145047 NM_206837	29449	-	TSC_hg19_v1_chr1_-_36929984 AB049946 AB209905 AK021626 BC031336 AF265439 AK315441 AK302633 NM_031280	43381	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	61906	-	AF394685|LSM10|84967|LSM10, U7 small nuclear RNA associated##AF166092|LSM10|84967|LSM10, U7 small nuclear RNA associated##BC007623|LSM10|84967|LSM10, U7 small nuclear RNA associated##NM_032881|LSM10|84967|LSM10, U7 small nuclear RNA associated##AK075048|STK40|83931|serine/threonine kinase 40##AL834137|STK40|83931|serine/threonine kinase 40##NM_032017|STK40|83931|serine/threonine kinase 40##BC008344|STK40|83931|serine/threonine kinase 40##BC007835|STK40|83931|serine/threonine kinase 40##AY198395|STK40|83931|serine/threonine kinase 40##AB079075|OSCP1|127700|organic solute carrier partner 1##AK098541|OSCP1|127700|organic solute carrier partner 1##BC018069|OSCP1|127700|organic solute carrier partner 1##NM_145047|OSCP1|127700|organic solute carrier partner 1##NM_206837|OSCP1|127700|organic solute carrier partner 1##AB049946|MRPS15|64960|mitochondrial ribosomal protein S15##AB209905|MRPS15|64960|mitochondrial ribosomal protein S15##AK021626|MRPS15|64960|mitochondrial ribosomal protein S15##BC031336|MRPS15|64960|mitochondrial ribosomal protein S15##AF265439|MRPS15|64960|mitochondrial ribosomal protein S15##AK315441|MRPS15|64960|mitochondrial ribosomal protein S15##AK302633|MRPS15|64960|mitochondrial ribosomal protein S15##NM_031280|MRPS15|64960|mitochondrial ribosomal protein S15##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)	0.986154	CTCF.p2:19:0.986
chr3	111830798	111830912	reg1001566.p1	15.709	+	TSC_hg19_v1_chr3_+_111805267 AK303588 NM_001171747 NM_024616 AY830714 AK026839 BC017064 AK298076	-25627	+	AK131211 NM_001042575 BC117322	-72347	+	NM_001008273 BC004477 TSC_hg19_v1_chr3_+_111718179 AF112201 BT007408 CU677265	-112718	+	CU688884 BC030506 AY212246 AK313368 AK128276 AF521911 NM_001190259 NM_001190260 NM_152785	21204	-	BC044801 NM_183061 AK128084	182233	-	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	221103	+	AK303588|C3orf52|79669|chromosome 3 open reading frame 52##NM_001171747|C3orf52|79669|chromosome 3 open reading frame 52##NM_024616|C3orf52|79669|chromosome 3 open reading frame 52##AY830714|C3orf52|79669|chromosome 3 open reading frame 52##AK026839|C3orf52|79669|chromosome 3 open reading frame 52##BC017064|C3orf52|79669|chromosome 3 open reading frame 52##AK298076|C3orf52|79669|chromosome 3 open reading frame 52##AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7##NM_001008273|TAGLN3|29114|transgelin 3##AF112201|TAGLN3|29114|transgelin 3##BT007408|TAGLN3|29114|transgelin 3##BC030506|GCET2|257144|germinal center expressed transcript 2##AY212246|GCET2|257144|germinal center expressed transcript 2##AK313368|GCET2|257144|germinal center expressed transcript 2##AF521911|GCET2|257144|germinal center expressed transcript 2##NM_001190259|GCET2|257144|germinal center expressed transcript 2##NM_001190260|GCET2|257144|germinal center expressed transcript 2##NM_152785|GCET2|257144|germinal center expressed transcript 2##BC044801|SLC9A10|285335|solute carrier family 9, member 10##NM_183061|SLC9A10|285335|solute carrier family 9, member 10##AK128084|SLC9A10|285335|solute carrier family 9, member 10##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule	0.973266	CTCF.p2:-17:0.973
chr10	71399088	71399227	reg1002054.p1	15.708	+	NM_145306 BC013587	-9150	+	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	-66057	-	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	-187824	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	162500	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	162532	+	TSC_hg19_v1_chr10_+_71562275 M59217	163134	+	NM_145306|C10orf35|219738|chromosome 10 open reading frame 35##BC013587|C10orf35|219738|chromosome 10 open reading frame 35##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##M59217|COL13A1|1305|collagen, type XIII, alpha 1	0.998548	CTCF.p2:14:0.999
chr1	110033366	110033473	reg1001544.p1	15.707	+	TSC_hg19_v1_chr1_+_110026580 BC036849 NM_153340	-6873	+	TSC_hg19_v1_chr1_+_110009222 AK293082	-24198	+	AK131459 NM_001040709 AK289513 AK302566 TSC_hg19_v1_chr1_+_110009189	-24274	+	NM_001134402 AK126707 NM_001134400 NM_001134403 NM_001134404 NM_182580 TSC_hg19_v1_chr1_+_110036712 AK299086 BX647509 AK096354 AK303546 BC093683 BC111999 BC143308 AK294992 AK128798	3277	+	TSC_hg19_v1_chr1_-_110052350 BC040879 AK295678 NM_020703	18915	-	AK290027 NM_031936 AF258342	49081	+	BC036849|ATXN7L2|127002|ataxin 7-like 2##NM_153340|ATXN7L2|127002|ataxin 7-like 2##AK293082|SYPL2|284612|synaptophysin-like 2##AK131459|SYPL2|284612|synaptophysin-like 2##NM_001040709|SYPL2|284612|synaptophysin-like 2##AK289513|SYPL2|284612|synaptophysin-like 2##AK302566|SYPL2|284612|synaptophysin-like 2##NM_001134402|CYB561D1|284613|cytochrome b-561 domain containing 1##AK126707|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134400|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134403|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134404|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_182580|CYB561D1|284613|cytochrome b-561 domain containing 1##AK299086|CYB561D1|284613|cytochrome b-561 domain containing 1##BX647509|CYB561D1|284613|cytochrome b-561 domain containing 1##AK096354|CYB561D1|284613|cytochrome b-561 domain containing 1##AK303546|CYB561D1|284613|cytochrome b-561 domain containing 1##BC093683|CYB561D1|284613|cytochrome b-561 domain containing 1##BC111999|CYB561D1|284613|cytochrome b-561 domain containing 1##BC143308|CYB561D1|284613|cytochrome b-561 domain containing 1##AK294992|CYB561D1|284613|cytochrome b-561 domain containing 1##AK128798|CYB561D1|284613|cytochrome b-561 domain containing 1##BC040879|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK295678|AMIGO1|57463|adhesion molecule with Ig-like domain 1##NM_020703|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK290027|GPR61|83873|G protein-coupled receptor 61##NM_031936|GPR61|83873|G protein-coupled receptor 61##AF258342|GPR61|83873|G protein-coupled receptor 61	0.998779	CTCF.p2:-1:0.999
chr15	45749851	45749985	reg1001430.p1	15.703	+	NM_032413 NM_197955 TSC_hg19_v1_chr15_+_45722808 AF228422 AK026298 BC021173 AB026707	-27121	+	NM_024063 TSC_hg19_v1_chr15_+_45694551 AK291457 AK023232 AK225463 BC051861 BC000981 AK022348	-55366	+	TSC_hg19_v1_chr15_-_45670958 NM_001482	-78951	-	BC026089 NM_013309 TSC_hg19_v1_chr15_-_45815017	65092	-	AF080470 NM_012388 TSC_hg19_v1_chr15_+_45879539 AK091740	129568	+	TSC_hg19_v1_chr15_+_45879576 AK057545 BC004819 AK315581 AB527698	129689	+	NM_032413|C15orf48|84419|chromosome 15 open reading frame 48##NM_197955|C15orf48|84419|chromosome 15 open reading frame 48##AF228422|C15orf48|84419|chromosome 15 open reading frame 48##AK026298|C15orf48|84419|chromosome 15 open reading frame 48##BC021173|C15orf48|84419|chromosome 15 open reading frame 48##AB026707|C15orf48|84419|chromosome 15 open reading frame 48##NM_024063|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK291457|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK023232|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK225463|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC051861|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC000981|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK022348|SPATA5L1|79029|spermatogenesis associated 5-like 1##NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC026089|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##NM_013309|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##AF080470|PLDN|26258|pallidin homolog (mouse)##NM_012388|PLDN|26258|pallidin homolog (mouse)##AK057545|PLDN|26258|pallidin homolog (mouse)##BC004819|PLDN|26258|pallidin homolog (mouse)##AK315581|PLDN|26258|pallidin homolog (mouse)	0.986555	CTCF.p2:13:0.987
chr1	201673442	201673580	reg1001464.p2	15.701	+	TSC_hg19_v1_chr1_+_201617793 BC117683 AJ488101	-55783	+	AY043013 NM_020443 TSC_hg19_v1_chr1_+_201617460	-56056	+	TSC_hg19_v1_chr1_+_201476345 AK097932	-197150	+	TSC_hg19_v1_chr1_+_201708656 AK056158	35141	+	TSC_hg19_v1_chr1_+_201709027 NM_001167738 BX648460	35473	+	TSC_hg19_v1_chr1_+_201709059 BC069250	35554	+	BC117683|NAV1|89796|neuron navigator 1##AJ488101|NAV1|89796|neuron navigator 1##AY043013|NAV1|89796|neuron navigator 1##NM_020443|NAV1|89796|neuron navigator 1##AK056158|NAV1|89796|neuron navigator 1##NM_001167738|NAV1|89796|neuron navigator 1##BX648460|NAV1|89796|neuron navigator 1##BC069250|NAV1|89796|neuron navigator 1	0.994436	CTCF.p2:-1:0.994
chr4	74519453	74519584	reg1002152.p1	15.700	+	AY217664 BC058835 NM_177532 AY217665 CR749283 AK126346 NM_201431	-33299	-	AK290556 NM_001133 BC109020 BC109021 L35486	-172048	+	NM_001134 V01514 AK297669 TSC_hg19_v1_chr4_+_74301937 AK297674 AK314817 BC027881 DQ890942 DQ894103 CU693306	-217563	+	NM_000584 Y00787 AK131067 AK311874 M17017 M26383 BC013615 AF043337 AB590232 DQ890564 DQ893727 BT007067 CR542151 Z11686	86780	+	NM_002993 AK311981 U81234 BC013744 DQ891500 DQ894692 AB463491	182851	+	NM_002620 BC130653 BC130657 HQ258042	199525	+	AY217664|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##BC058835|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_177532|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AY217665|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##CR749283|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK126346|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_201431|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK290556|AFM|173|afamin##NM_001133|AFM|173|afamin##BC109020|AFM|173|afamin##BC109021|AFM|173|afamin##L35486|AFM|173|afamin##NM_001134|AFP|174|alpha-fetoprotein##V01514|AFP|174|alpha-fetoprotein##AK297669|AFP|174|alpha-fetoprotein##AK297674|AFP|174|alpha-fetoprotein##AK314817|AFP|174|alpha-fetoprotein##BC027881|AFP|174|alpha-fetoprotein##DQ890942|AFP|174|alpha-fetoprotein##DQ894103|AFP|174|alpha-fetoprotein##NM_000584|IL8|3576|interleukin 8##Y00787|IL8|3576|interleukin 8##AK131067|IL8|3576|interleukin 8##AK311874|IL8|3576|interleukin 8##M17017|IL8|3576|interleukin 8##M26383|IL8|3576|interleukin 8##BC013615|IL8|3576|interleukin 8##DQ890564|IL8|3576|interleukin 8##DQ893727|IL8|3576|interleukin 8##BT007067|IL8|3576|interleukin 8##CR542151|IL8|3576|interleukin 8##Z11686|IL8|3576|interleukin 8##NM_002993|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##AK311981|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##U81234|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##BC013744|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ891500|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ894692|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##NM_002620|PF4V1|5197|platelet factor 4 variant 1##BC130653|PF4V1|5197|platelet factor 4 variant 1##BC130657|PF4V1|5197|platelet factor 4 variant 1##HQ258042|PF4V1|5197|platelet factor 4 variant 1	0.950194	CTCF.p2:37:0.950
chr11	61665247	61665342	reg1001089.p1	15.698	+	AB529172 DQ892880 DQ896129 CU678796 TSC_hg19_v1_chr11_-_61659018 AF134404 AK295473 AK310523 AF084560 BC004901 NM_021727	-6340	-	AK074939 BC009011 TSC_hg19_v1_chr11_+_61595772 AF126799 AB529115	-69478	+	TSC_hg19_v1_chr11_+_61595676 AF084559 NM_004265	-69593	+	TSC_hg19_v1_chr11_-_61684983 BC022239 NM_013401	19694	-	BC015220 NM_001139443 NM_004183	52061	+	CU677245 AK293701 TSC_hg19_v1_chr11_+_61722706 AK301392	57368	+	DQ892880|FADS3|3995|fatty acid desaturase 3##DQ896129|FADS3|3995|fatty acid desaturase 3##AF134404|FADS3|3995|fatty acid desaturase 3##AK295473|FADS3|3995|fatty acid desaturase 3##AK310523|FADS3|3995|fatty acid desaturase 3##AF084560|FADS3|3995|fatty acid desaturase 3##BC004901|FADS3|3995|fatty acid desaturase 3##NM_021727|FADS3|3995|fatty acid desaturase 3##AK074939|FADS2|9415|fatty acid desaturase 2##BC009011|FADS2|9415|fatty acid desaturase 2##AF126799|FADS2|9415|fatty acid desaturase 2##AF084559|FADS2|9415|fatty acid desaturase 2##NM_004265|FADS2|9415|fatty acid desaturase 2##BC022239|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##NM_013401|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##BC015220|BEST1|7439|bestrophin 1##NM_001139443|BEST1|7439|bestrophin 1##NM_004183|BEST1|7439|bestrophin 1##AK293701|BEST1|7439|bestrophin 1##AK301392|BEST1|7439|bestrophin 1	0.99632	CTCF.p2:-7:0.996
chr12	112251044	112251178	reg1001093.p1	15.698	+	TSC_hg19_v1_chr12_+_112204765 AY621070 BC002967 X05409 AK223373 AK301375 Y00109 AK314856 BC071839 AB385105 CR456991 CU678320	-46363	+	NM_000690 NM_001204889 TSC_hg19_v1_chr12_+_112204694	-46419	+	AK092356 AK310923 AX747497 TSC_hg19_v1_chr12_+_112123871 AL832043 BC015056 AY323912 BC126358	-127205	+	TSC_hg19_v1_chr12_-_112279735 BC071748 BC007973 BC015633 BC032560 AK124158 BC107695	28621	-	AK122767 TSC_hg19_v1_chr12_+_112280039	28801	+	BC041049 TSC_hg19_v1_chr12_+_112280044	28962	+	AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##NM_000690|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##NM_001204889|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK092356|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AK310923|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AL832043|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC015056|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AY323912|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC126358|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC007973|C12orf47|51275|chromosome 12 open reading frame 47##BC015633|C12orf47|51275|chromosome 12 open reading frame 47##BC032560|C12orf47|51275|chromosome 12 open reading frame 47##AK122767|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##BC041049|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5	0.975575	CTCF.p2:9:0.976
chr7	107754703	107754824	reg1002052.p1	15.697	+	AB384752 TSC_hg19_v1_chr7_-_107643594 BC113455 M61916 BX648251 AK303501 AK309921 AK307611 BC044633 BC052598 NM_002291	-111158	-	AK300077 TSC_hg19_v1_chr7_+_107531630 AK225289 AK310220 AB209703 BC018648 BC018696 J03620 AB529125 CU676276	-223107	+	J03490 TSC_hg19_v1_chr7_+_107531617 AK297508	-223147	+	BC142619 BC140804 BC144591 AF028816 AK300385 NM_007356	16029	-	AJ001057 AB385311 NM_001037132	125789	-	TSC_hg19_v1_chr7_-_108096830 BC114570 BC115736 AB002341 BX538010 AK299870 BC098401 NM_001193582 NM_001193583 NM_001193584 NM_005010	342166	-	BC113455|LAMB1|3912|laminin, beta 1##M61916|LAMB1|3912|laminin, beta 1##BX648251|LAMB1|3912|laminin, beta 1##AK303501|LAMB1|3912|laminin, beta 1##AK309921|LAMB1|3912|laminin, beta 1##AK307611|LAMB1|3912|laminin, beta 1##BC044633|LAMB1|3912|laminin, beta 1##BC052598|LAMB1|3912|laminin, beta 1##NM_002291|LAMB1|3912|laminin, beta 1##AK300077|DLD|1738|dihydrolipoamide dehydrogenase##AK225289|DLD|1738|dihydrolipoamide dehydrogenase##AK310220|DLD|1738|dihydrolipoamide dehydrogenase##AB209703|DLD|1738|dihydrolipoamide dehydrogenase##BC018648|DLD|1738|dihydrolipoamide dehydrogenase##BC018696|DLD|1738|dihydrolipoamide dehydrogenase##J03620|DLD|1738|dihydrolipoamide dehydrogenase##J03490|DLD|1738|dihydrolipoamide dehydrogenase##AK297508|DLD|1738|dihydrolipoamide dehydrogenase##BC142619|LAMB4|22798|laminin, beta 4##BC140804|LAMB4|22798|laminin, beta 4##BC144591|LAMB4|22798|laminin, beta 4##AF028816|LAMB4|22798|laminin, beta 4##AK300385|LAMB4|22798|laminin, beta 4##NM_007356|LAMB4|22798|laminin, beta 4##AJ001057|NRCAM|4897|neuronal cell adhesion molecule##NM_001037132|NRCAM|4897|neuronal cell adhesion molecule##BC114570|NRCAM|4897|neuronal cell adhesion molecule##BC115736|NRCAM|4897|neuronal cell adhesion molecule##AB002341|NRCAM|4897|neuronal cell adhesion molecule##BX538010|NRCAM|4897|neuronal cell adhesion molecule##AK299870|NRCAM|4897|neuronal cell adhesion molecule##BC098401|NRCAM|4897|neuronal cell adhesion molecule##NM_001193582|NRCAM|4897|neuronal cell adhesion molecule##NM_001193583|NRCAM|4897|neuronal cell adhesion molecule##NM_001193584|NRCAM|4897|neuronal cell adhesion molecule##NM_005010|NRCAM|4897|neuronal cell adhesion molecule	0.274822	CTCF.p2:-8:0.275
chr17	74010406	74010526	reg1002321.p1	15.696	+	NM_001258 TSC_hg19_v1_chr17_+_73997033	-13457	+	TSC_hg19_v1_chr17_-_73975509 NM_001185039 NM_004035 NM_007292	-34939	-	BC008767 TSC_hg19_v1_chr17_-_73975478	-35000	-	BC126103 BC126105 BC143813 BC143814 U53786 TSC_hg19_v1_chr17_-_74023388	12884	-	TSC_hg19_v1_chr17_-_74023511 NM_001988 AK290333	13048	-	AL512708 TSC_hg19_v1_chr17_-_74068571 AF195951	58082	-	NM_001258|CDK3|1018|cyclin-dependent kinase 3##NM_001185039|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##NM_004035|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##NM_007292|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##BC008767|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##BC126103|EVPL|2125|envoplakin##BC126105|EVPL|2125|envoplakin##BC143813|EVPL|2125|envoplakin##BC143814|EVPL|2125|envoplakin##U53786|EVPL|2125|envoplakin##NM_001988|EVPL|2125|envoplakin##AK290333|EVPL|2125|envoplakin##AL512708|SRP68|6730|signal recognition particle 68kDa##AF195951|SRP68|6730|signal recognition particle 68kDa	0.931643	CTCF.p2:-2:0.932
chr13	23594502	23594639	reg1002366.p1	15.695	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-1349422	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-1416210	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-1416261	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	160545	+	TSC_hg19_v1_chr13_-_23949652 AK125458	355080	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	413270	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.999539	CTCF.p2:10:1.000
chr5	18305533	18305664	reg1002303.p1	15.695	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-1087758	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-1087986	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-1369213	-	AK295087 BC031051 NM_001167667 NM_004934	1682724	-	TSC_hg19_v1_chr5_+_21459621 AK290693	3154011	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	3154050	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.695919	CTCF.p2:14:0.696
chr14	105512163	105512315	reg1001796.p1	15.693	+	TSC_hg19_v1_chr14_-_105487428 NM_017955 NM_145701	-24815	-	TSC_hg19_v1_chr14_-_105487413 AK303947	-24823	-	TSC_hg19_v1_chr14_-_105487410 AF322239 BC011736 BC025263	-24852	-	TSC_hg19_v1_chr14_-_105531756 AF083955 AX775937 NM_013345 EU543705	19509	-	TSC_hg19_v1_chr14_-_105531768 AB465599 AB465600 AK292142 AK303654 AX775935 AX775841	19534	-	Y14330 AF003521 AF020201 TSC_hg19_v1_chr14_-_105634835 BC032053	122552	-	NM_017955|CDCA4|55038|cell division cycle associated 4##NM_145701|CDCA4|55038|cell division cycle associated 4##AK303947|CDCA4|55038|cell division cycle associated 4##AF322239|CDCA4|55038|cell division cycle associated 4##BC011736|CDCA4|55038|cell division cycle associated 4##BC025263|CDCA4|55038|cell division cycle associated 4##AF083955|GPR132|29933|G protein-coupled receptor 132##NM_013345|GPR132|29933|G protein-coupled receptor 132##EU543705|GPR132|29933|G protein-coupled receptor 132##AB465599|GPR132|29933|G protein-coupled receptor 132##AB465600|GPR132|29933|G protein-coupled receptor 132##AK292142|GPR132|29933|G protein-coupled receptor 132##AK303654|GPR132|29933|G protein-coupled receptor 132##AX775935|GPR132|29933|G protein-coupled receptor 132##AX775841|GPR132|29933|G protein-coupled receptor 132##Y14330|JAG2|3714|jagged 2##AF003521|JAG2|3714|jagged 2##AF020201|JAG2|3714|jagged 2##BC032053|JAG2|3714|jagged 2	1.129933	CTCF.p2:-39:0.999
chrX	119284352	119284502	reg1002619.p1	15.691	+	AB464155 EU446851 BC103857 BC103858 BC069324 BC069529 AY099086 NM_139282	-34617	-	AB464156 DQ890992 DQ894169 BC021719 AK058125 AL590524 AF317219 AL590526 NM_001099685 NM_032498	-72816	-	CU677277 CU689374 BC032442 BC015354 BC016783 BC000940 BC012770 TSC_hg19_v1_chrX_-_119077709 BC018968 BC071686 AL832118 AK026279 AY388958 NM_024528	-206754	-	AL590526 NM_001099685 NM_032498 AF317219 AL590524 AK058125 BC021719 AB464156 DQ890992 DQ894169	8134	+	BC113730 BC113732 TSC_hg19_v1_chrX_-_119379092 BC022359 AK093895 AX748357	94651	-	TSC_hg19_v1_chrX_+_119384666 BC042753 NM_006777 NM_001184742 BX538016 AL833604 AK312321 BX538101	100159	+	EU446851|RHOXF1|158800|Rhox homeobox family, member 1##BC103857|RHOXF1|158800|Rhox homeobox family, member 1##BC103858|RHOXF1|158800|Rhox homeobox family, member 1##BC069324|RHOXF1|158800|Rhox homeobox family, member 1##BC069529|RHOXF1|158800|Rhox homeobox family, member 1##AY099086|RHOXF1|158800|Rhox homeobox family, member 1##NM_139282|RHOXF1|158800|Rhox homeobox family, member 1##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##BC032442|NKAP|79576|NFKB activating protein##BC015354|NKAP|79576|NFKB activating protein##BC016783|NKAP|79576|NFKB activating protein##BC000940|NKAP|79576|NFKB activating protein##BC012770|NKAP|79576|NFKB activating protein##BC018968|NKAP|79576|NFKB activating protein##BC071686|NKAP|79576|NFKB activating protein##AL832118|NKAP|79576|NFKB activating protein##AK026279|NKAP|79576|NFKB activating protein##AY388958|NKAP|79576|NFKB activating protein##NM_024528|NKAP|79576|NFKB activating protein##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##BC113730|NKAPP1|158801|NFKB activating protein pseudogene 1##BC113732|NKAPP1|158801|NFKB activating protein pseudogene 1##BC022359|NKAPP1|158801|NFKB activating protein pseudogene 1##AK093895|NKAPP1|158801|NFKB activating protein pseudogene 1##BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33##NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33##NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33##BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33##AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33##AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33##BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33	1.041009	CTCF.p2:11:0.983
chr15	75497224	75497349	reg1001918.p1	15.690	+	TSC_hg19_v1_chr15_+_75494242 AF495726 BC011379 AK125604	-3043	+	BC110367 TSC_hg19_v1_chr15_+_75494233	-3053	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	-3074	+	AF263742 NM_001164404	53612	+	AF263742 NM_001145224	77892	+	NM_017828 AK225716 BC033744 AK000459 AK293708 AK057145 AK124968 AK314740 BC069195 BC068998 AL136872	131108	+	AF495726|C15orf39|56905|chromosome 15 open reading frame 39##BC011379|C15orf39|56905|chromosome 15 open reading frame 39##AK125604|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001164404|GOLGA6C|653641|golgin A6 family, member C##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001145224|GOLGA6D|653643|golgin A6 family, member D##NM_017828|COMMD4|54939|COMM domain containing 4##AK225716|COMMD4|54939|COMM domain containing 4##BC033744|COMMD4|54939|COMM domain containing 4##AK000459|COMMD4|54939|COMM domain containing 4##AK293708|COMMD4|54939|COMM domain containing 4##AK057145|COMMD4|54939|COMM domain containing 4##AK314740|COMMD4|54939|COMM domain containing 4##BC069195|COMMD4|54939|COMM domain containing 4##BC068998|COMMD4|54939|COMM domain containing 4##AL136872|COMMD4|54939|COMM domain containing 4	0.914257	CTCF.p2:12:0.914
chr18	60985406	60985564	reg1001679.p4	15.690	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-189550	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-601177	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-601559	+	BC027258 NM_000633 NM_000657	1075	-	TSC_hg19_v1_chr18_-_60986977 X06487	1508	-	TSC_hg19_v1_chr18_-_60987309 M13994	1801	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.036248	
chr14	77380046	77380191	reg1001092.p2	15.689	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-87323	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-100856	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-100908	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	114566	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	114942	-	AK124327 TSC_hg19_v1_chr14_-_77542533	162415	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.866123	CTCF.p2:-4:0.866
chr12	110950359	110950480	reg1001305.p1	15.686	+	AK124109 NM_152442 AK301826 BC037353 AK302512 AY297459 BC068031 BC047645 AK097665	-10344	+	TSC_hg19_v1_chr12_-_110939917 BC015095 AF201946 AF175264 BC000880 AF168716 AF193795 AK129767 BC017964 AB578891 AB618733 AL136614 BC095446 NM_016226 NM_057180 BC032462 AB578892	-10509	-	TSC_hg19_v1_chr12_+_110906672 CR457001 CU676792 DQ891800 DQ894984	-43750	+	TSC_hg19_v1_chr12_-_111020755 AY357944	70374	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	70651	-	AK124744 TSC_hg19_v1_chr12_-_111021124	70707	-	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)##NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)##AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)##BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)##AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)##AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)##BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)##BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)##AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)##BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578891|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB618733|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578892|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##CR457001|C12orf24|29902|chromosome 12 open reading frame 24##DQ891800|C12orf24|29902|chromosome 12 open reading frame 24##DQ894984|C12orf24|29902|chromosome 12 open reading frame 24##AY357944|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)	0.482379	CTCF.p2:-5:0.482
chr14	89884382	89884547	reg1001575.p4	15.686	+	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	-1054	-	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-5688	-	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-593471	+	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	201131	-	BC001787 BX247991 AK298930 AK094740 NM_145231	536596	-	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	537782	+	BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1	0.0	
chr12	114350635	114350754	reg1001232.p1	15.685	+	AF291181 NM_022363	-440818	-	TSC_hg19_v1_chr12_+_113860217 BC009849 NM_138432 BC091479 AF134473	-490497	+	J05037 TSC_hg19_v1_chr12_-_113841693 AK292760 BC020750 NM_006843	-509020	-	CU678656 EU831458 EU831545 AB385372 AB014582 BC004289 BC006137 AL117547 TSC_hg19_v1_chr12_-_114404131 AK291444 AK314606 NM_001146698 NM_001146699 NM_016196	53410	-	NM_080718 U80987 U89353 AB527531 EU446658	491010	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	493230	-	AF291181|LHX5|64211|LIM homeobox 5##NM_022363|LHX5|64211|LIM homeobox 5##BC009849|SDSL|113675|serine dehydratase-like##NM_138432|SDSL|113675|serine dehydratase-like##BC091479|SDSL|113675|serine dehydratase-like##AF134473|SDSL|113675|serine dehydratase-like##J05037|SDS|10993|serine dehydratase##AK292760|SDS|10993|serine dehydratase##BC020750|SDS|10993|serine dehydratase##NM_006843|SDS|10993|serine dehydratase##EU831458|RBM19|9904|RNA binding motif protein 19##EU831545|RBM19|9904|RNA binding motif protein 19##AB014582|RBM19|9904|RNA binding motif protein 19##BC004289|RBM19|9904|RNA binding motif protein 19##BC006137|RBM19|9904|RNA binding motif protein 19##AL117547|RBM19|9904|RNA binding motif protein 19##AK291444|RBM19|9904|RNA binding motif protein 19##AK314606|RBM19|9904|RNA binding motif protein 19##NM_001146698|RBM19|9904|RNA binding motif protein 19##NM_001146699|RBM19|9904|RNA binding motif protein 19##NM_016196|RBM19|9904|RNA binding motif protein 19##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5	0.683143	CTCF.p2:2:0.683
chr2	192020476	192020599	reg1002080.p1	15.683	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-4230	-	TSC_hg19_v1_chr2_-_192015965 NM_003151	-4578	-	L78440 TSC_hg19_v1_chr2_-_192015772 AK301172	-4768	-	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	89561	+	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	522325	+	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	691201	-	BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##NM_003151|STAT4|6775|signal transducer and activator of transcription 4##L78440|STAT4|6775|signal transducer and activator of transcription 4##AK301172|STAT4|6775|signal transducer and activator of transcription 4##NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response	0.023821	
chr2	99266021	99266151	reg1001969.p1	15.683	+	TSC_hg19_v1_chr2_+_99225088 AF077038	-40994	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	-41016	+	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	-41036	+	AK304393 AK309852 NM_001160154	13849	-	TSC_hg19_v1_chr2_-_99347557 AK314024	81410	-	NM_012214 TSC_hg19_v1_chr2_-_99347596	81527	-	AF077038|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##AK304393|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK309852|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##NM_001160154|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	0.04533	
chr8	71000919	71001053	reg1002304.p1	15.682	+	TSC_hg19_v1_chr8_-_70983549 AF319458 AK022595 NM_024504	-17431	-	TSC_hg19_v1_chr8_-_70983468 BC052311	-17515	-	AK308488 AF205075 AK096879 NM_030958	-253737	-	BC092442 TSC_hg19_v1_chr8_-_71315599	314561	-	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	315040	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	519536	-	AF319458|PRDM14|63978|PR domain containing 14##AK022595|PRDM14|63978|PR domain containing 14##NM_024504|PRDM14|63978|PR domain containing 14##BC052311|PRDM14|63978|PR domain containing 14##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC092442|NCOA2|10499|nuclear receptor coactivator 2##NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1	0.999574	CTCF.p2:4:1.000
chr17	77083789	77083911	reg1002596.p1	15.678	+	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-12820	+	AF329840 NM_198593 BC021553	-53328	+	TSC_hg19_v1_chr17_+_77020308 AK055541	-63540	+	NM_001082575	394712	-	AY230663 BC041453 NM_178543 AY358622	621039	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	668131	+	AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2	1.029246	CTCF.p2:1:1.000
chr20	47833773	47833891	reg1002041.p1	15.678	+	AF061938 AF061939 AF061940 AF061941 AY546099 NM_001037328 NM_004602 NM_017452 NM_017453 NM_017454 TSC_hg19_v1_chr20_-_47804905	-28919	-	TSC_hg19_v1_chr20_-_47804876 AK292859 BC001893 BC010169 AY529074 AK291487 BC007532 AK057739 AK025519 BC095397 AL136601	-29046	-	TSC_hg19_v1_chr20_+_47662875 AF053640	-170944	+	NM_017895 BC126287 BC130275 BC144125 BC104480 HQ258508 AY044431 AL832131 EU718675 TSC_hg19_v1_chr20_+_47835952 AK300135	2060	+	TSC_hg19_v1_chr20_+_47835954 AK022979	2126	+	TSC_hg19_v1_chr20_+_47835964 BC009304 BC011927 BC016060 HQ258546	2142	+	AF061938|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061939|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061940|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061941|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AY546099|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_001037328|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_004602|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017452|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017453|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017454|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK292859|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC001893|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC010169|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AY529074|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK291487|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC007532|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK057739|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK025519|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC095397|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AL136601|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF053640|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##NM_017895|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC126287|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC130275|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC144125|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC104480|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##HQ258508|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AY044431|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AL832131|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##EU718675|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AK300135|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AK022979|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC009304|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC011927|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC016060|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##HQ258546|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	0.987545	CTCF.p2:3:0.988
chr3	52035622	52035770	reg1001452.p1	15.678	+	BC008926 NM_000992 TSC_hg19_v1_chr3_-_52029968	-5733	-	TSC_hg19_v1_chr3_-_52029912 BC070190 AK289538 AK311884 D28412	-5783	-	TSC_hg19_v1_chr3_-_52029890 BC071663 U49083 U10248 Z49148 BC071909 BC070481	-5815	-	X93921 TSC_hg19_v1_chr3_-_52090192 BC019107 AF508727 BC104880 BC104882 NM_001947	54579	-	TSC_hg19_v1_chr3_-_52188413 BC119692 AK075289 BC119693 AK315688	152734	-	BC110877 NM_001161580 NM_001161581 NM_015426	153009	-	BC008926|RPL29|6159|ribosomal protein L29##NM_000992|RPL29|6159|ribosomal protein L29##BC070190|RPL29|6159|ribosomal protein L29##AK289538|RPL29|6159|ribosomal protein L29##AK311884|RPL29|6159|ribosomal protein L29##D28412|RPL29|6159|ribosomal protein L29##BC071663|RPL29|6159|ribosomal protein L29##U49083|RPL29|6159|ribosomal protein L29##U10248|RPL29|6159|ribosomal protein L29##Z49148|RPL29|6159|ribosomal protein L29##BC071909|RPL29|6159|ribosomal protein L29##BC070481|RPL29|6159|ribosomal protein L29##X93921|DUSP7|1849|dual specificity phosphatase 7##BC019107|DUSP7|1849|dual specificity phosphatase 7##AF508727|DUSP7|1849|dual specificity phosphatase 7##BC104880|DUSP7|1849|dual specificity phosphatase 7##BC104882|DUSP7|1849|dual specificity phosphatase 7##NM_001947|DUSP7|1849|dual specificity phosphatase 7##BC119692|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK075289|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC119693|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK315688|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC110877|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161580|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161581|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_015426|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)	0.971355	CTCF.p2:-2:0.938
chr1	192446887	192447013	reg1001896.p1	15.676	+	AY643711 NM_001039152	-160829	+	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	-319347	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	-2000215	-	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	97958	+	NM_002927 NM_144766 AF030107 BC016667	158334	+	BC042755 BC044742 NM_002923 TSC_hg19_v1_chr1_+_192778168 AK313668 BC007049 L13463 AY971351 AB528517 AF493926 BT007065 CR457410 CU675517 DQ893178 DQ896478	331234	+	AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1##NM_002927|RGS13|6003|regulator of G-protein signaling 13##NM_144766|RGS13|6003|regulator of G-protein signaling 13##AF030107|RGS13|6003|regulator of G-protein signaling 13##BC016667|RGS13|6003|regulator of G-protein signaling 13##BC042755|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC044742|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002923|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AK313668|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC007049|RGS2|5997|regulator of G-protein signaling 2, 24kDa##L13463|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AY971351|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AF493926|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT007065|RGS2|5997|regulator of G-protein signaling 2, 24kDa##CR457410|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ893178|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ896478|RGS2|5997|regulator of G-protein signaling 2, 24kDa	0.876015	CTCF.p2:-15:0.876
chr17	21183455	21183564	reg1001374.p1	15.676	+	AK126856 NM_152914 BC029527 TSC_hg19_v1_chr17_-_21156754	-26843	-	TSC_hg19_v1_chr17_-_21117911 BC005268 NM_003876	-65604	-	TSC_hg19_v1_chr17_-_21117651 X51804	-65833	-	NM_145109 TSC_hg19_v1_chr17_+_21188018	4483	+	TSC_hg19_v1_chr17_+_21188022 AK315505	4515	+	BC032478 TSC_hg19_v1_chr17_+_21188087 AK093838 AK223490 D87116 CU689390 DQ894188 AB451226 AB451349 CR536514 CR541793 GQ225578	4623	+	AK126856|C17orf103|256302|chromosome 17 open reading frame 103##NM_152914|C17orf103|256302|chromosome 17 open reading frame 103##BC029527|C17orf103|256302|chromosome 17 open reading frame 103##BC005268|TMEM11|8834|transmembrane protein 11##NM_003876|TMEM11|8834|transmembrane protein 11##X51804|TMEM11|8834|transmembrane protein 11##NM_145109|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK315505|MAP2K3|5606|mitogen-activated protein kinase kinase 3##BC032478|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK093838|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK223490|MAP2K3|5606|mitogen-activated protein kinase kinase 3##D87116|MAP2K3|5606|mitogen-activated protein kinase kinase 3##DQ894188|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AB451226|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AB451349|MAP2K3|5606|mitogen-activated protein kinase kinase 3##CR536514|MAP2K3|5606|mitogen-activated protein kinase kinase 3##CR541793|MAP2K3|5606|mitogen-activated protein kinase kinase 3##GQ225578|MAP2K3|5606|mitogen-activated protein kinase kinase 3	1.044025	CTCF.p2:-19:0.998
chr2	219763058	219763188	reg1001629.p2	15.672	+	BC052234 AK024363 NM_025216 BC040026	-17860	+	AY009401 NM_006522 AK075522 AB059570 DQ890770 BC004329 AB590154 BT007456	-38471	+	AJ249977 BC098102 BC098255 BC098277 BC098306 NM_017431 AK300078 AK300687 AK309865	-66605	-	TSC_hg19_v1_chr2_+_219824381 BC041771 NM_003936 U34051	61286	+	BC023511 NM_017521 Y08976	87202	-	AF166331 NM_005209 BC006285 NM_057093 NM_057094	95000	-	BC052234|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AK024363|WNT10A|80326|wingless-type MMTV integration site family, member 10A##NM_025216|WNT10A|80326|wingless-type MMTV integration site family, member 10A##BC040026|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AY009401|WNT6|7475|wingless-type MMTV integration site family, member 6##NM_006522|WNT6|7475|wingless-type MMTV integration site family, member 6##AK075522|WNT6|7475|wingless-type MMTV integration site family, member 6##AB059570|WNT6|7475|wingless-type MMTV integration site family, member 6##DQ890770|WNT6|7475|wingless-type MMTV integration site family, member 6##BC004329|WNT6|7475|wingless-type MMTV integration site family, member 6##BT007456|WNT6|7475|wingless-type MMTV integration site family, member 6##AJ249977|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098102|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098255|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098277|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098306|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##NM_017431|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300078|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300687|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK309865|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC041771|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##NM_003936|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##U34051|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##BC023511|FEV|54738|FEV (ETS oncogene family)##NM_017521|FEV|54738|FEV (ETS oncogene family)##Y08976|FEV|54738|FEV (ETS oncogene family)##AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2	1.035779	CTCF.p2:7:0.970
chrX	11788494	11788636	reg1001915.p1	15.672	+	NM_006800 AK025642	-10818	+	NM_001193270 AK300814	-11848	+	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	-12222	+	AB002314 NM_014728 AK289694	368025	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	1020932	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	1021003	+	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2	0.956574	CTCF.p2:6:0.957
chr17	46055848	46055980	reg1001262.p1	15.671	+	AF343090 TSC_hg19_v1_chr17_+_46048487 AF110322 AK225274 BC072435 AB062433 BC009957	-7420	+	TSC_hg19_v1_chr17_+_46048471 AF217982 AK023722	-7445	+	AK223387 NM_176096 TSC_hg19_v1_chr17_+_46048452	-7482	+	TSC_hg19_v1_chr17_-_46115160 AB590254 DQ893053 DQ896301 AB047849 BC015924 AB037938 NM_016429	59236	-	TSC_hg19_v1_chr17_+_46125712 NM_003204 BC010623 AK090459	69785	+	AL833530 TSC_hg19_v1_chr17_+_46125724	69810	+	AF343090|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF110322|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK225274|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC072435|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AB062433|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC009957|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF217982|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK023722|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK223387|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##NM_176096|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##DQ893053|COPZ2|51226|coatomer protein complex, subunit zeta 2##DQ896301|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB047849|COPZ2|51226|coatomer protein complex, subunit zeta 2##BC015924|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB037938|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_016429|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	0.998129	CTCF.p2:-12:0.998
chr19	42954743	42954863	reg1001382.p2	15.671	+	BC093946 BC112095 AK292985 AY358433 NM_198477 AY598464	-7679	-	AK309893 AK292482 BC029961 BC070041 NM_005357 U40002	-23265	-	TSC_hg19_v1_chr19_-_42928157 BC029301	-26590	-	X16356 TSC_hg19_v1_chr19_-_43031473	76606	-	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	77789	-	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	144227	-	BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17##BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17##NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292482|LIPE|3991|lipase, hormone-sensitive##BC029961|LIPE|3991|lipase, hormone-sensitive##BC070041|LIPE|3991|lipase, hormone-sensitive##NM_005357|LIPE|3991|lipase, hormone-sensitive##U40002|LIPE|3991|lipase, hormone-sensitive##BC029301|LIPE|3991|lipase, hormone-sensitive##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	0.995132	CTCF.p2:-14:0.995
chr6	166726862	166726995	reg1001577.p1	15.671	+	BC034775 NM_175922 TSC_hg19_v1_chr6_-_166721880	-5052	-	BC098425 NM_003181	-144799	-	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	-325394	-	BC018969 NM_145169 TSC_hg19_v1_chr6_-_166756020	29079	-	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	29106	-	CU674406 TSC_hg19_v1_chr6_-_166796429 BC000810 AK312201 AK310934	69481	-	BC034775|PRR18|285800|proline rich 18##NM_175922|PRR18|285800|proline rich 18##BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)##BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##BC018969|SFT2D1|113402|SFT2 domain containing 1##NM_145169|SFT2D1|113402|SFT2 domain containing 1##AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1##BC000810|BRP44L|51660|brain protein 44-like##AK312201|BRP44L|51660|brain protein 44-like	0.0	
chr11	61022030	61022156	reg1002181.p1	15.670	+	NM_014224 BC146999 BC171889 BC171897 BC029055	-13438	+	AK301305 AK312941 NM_001079808 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	-32248	+	NM_001079807 AK301286 AK301293 AK301305 AK312941 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	-51085	+	BC142624 AK056571 TSC_hg19_v1_chr11_-_61062552 BC042143 BC052564 BC077719 AK299583	40457	-	TSC_hg19_v1_chr11_-_61062698 NM_152718	40649	-	AB384683 L40326 TSC_hg19_v1_chr11_-_61100540 BC021044 AK312436 AK303032 BC011686 AK294341 AK311476 U18299	78400	-	NM_014224|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##BC146999|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##BC171889|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##BC171897|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##BC029055|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##NM_001079808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##NM_001079807|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301286|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301293|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC142624|VWCE|220001|von Willebrand factor C and EGF domains##AK056571|VWCE|220001|von Willebrand factor C and EGF domains##BC042143|VWCE|220001|von Willebrand factor C and EGF domains##BC052564|VWCE|220001|von Willebrand factor C and EGF domains##BC077719|VWCE|220001|von Willebrand factor C and EGF domains##AK299583|VWCE|220001|von Willebrand factor C and EGF domains##NM_152718|VWCE|220001|von Willebrand factor C and EGF domains##L40326|DDB1|1642|damage-specific DNA binding protein 1, 127kDa##BC021044|DDB1|1642|damage-specific DNA binding protein 1, 127kDa##AK312436|DDB1|1642|damage-specific DNA binding protein 1, 127kDa##AK303032|DDB1|1642|damage-specific DNA binding protein 1, 127kDa##BC011686|DDB1|1642|damage-specific DNA binding protein 1, 127kDa##AK294341|DDB1|1642|damage-specific DNA binding protein 1, 127kDa##AK311476|DDB1|1642|damage-specific DNA binding protein 1, 127kDa##U18299|DDB1|1642|damage-specific DNA binding protein 1, 127kDa	0.216275	CTCF.p2:-10:0.216
chr1	35063593	35063733	reg1001552.p1	15.669	+	NM_001134734	-421111	+	AK123355 NM_032884 BC007637	-431064	+	AY210418 NM_052896	-432221	-	AK129509 BC004379 NM_005268	157020	+	AK057628 NM_153212	161678	+	AK026139 NM_024009 TSC_hg19_v1_chr1_+_35246807	183143	+	NM_001134734|C1orf94|84970|chromosome 1 open reading frame 94##AK123355|C1orf94|84970|chromosome 1 open reading frame 94##NM_032884|C1orf94|84970|chromosome 1 open reading frame 94##BC007637|C1orf94|84970|chromosome 1 open reading frame 94##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2##AK129509|GJB5|2709|gap junction protein, beta 5, 31.1kDa##BC004379|GJB5|2709|gap junction protein, beta 5, 31.1kDa##NM_005268|GJB5|2709|gap junction protein, beta 5, 31.1kDa##AK057628|GJB4|127534|gap junction protein, beta 4, 30.3kDa##NM_153212|GJB4|127534|gap junction protein, beta 4, 30.3kDa##AK026139|GJB3|2707|gap junction protein, beta 3, 31kDa##NM_024009|GJB3|2707|gap junction protein, beta 3, 31kDa	0.899429	CTCF.p2:35:0.899
chr14	23849254	23849391	reg1002679.p1	15.669	+	TSC_hg19_v1_chr14_+_23845933 AF479262 NM_001037288 NM_138460	-3348	+	AF461739 NM_172314 AF305200 AY359127 NM_022789 BC104929 BC104931 AF458059 BC069565 AB590822 CU686908 EU831823 EU831900	-7150	+	AB001466 AB001467 NM_005864 NM_032459 TSC_hg19_v1_chr14_-_23834939 BC046403	-14422	-	TSC_hg19_v1_chr14_-_23877483 AK309494 NM_002471 X56181	28161	-	M58018 TSC_hg19_v1_chr14_-_23904870 AK307590 EU747717 NM_000257	55537	-	TSC_hg19_v1_chr14_+_23938899 NM_001042635 NM_015514 AK124318	89569	+	AF479262|CMTM5|116173|CKLF-like MARVEL transmembrane domain containing 5##NM_001037288|CMTM5|116173|CKLF-like MARVEL transmembrane domain containing 5##NM_138460|CMTM5|116173|CKLF-like MARVEL transmembrane domain containing 5##AF461739|IL25|64806|interleukin 25##NM_172314|IL25|64806|interleukin 25##AF305200|IL25|64806|interleukin 25##AY359127|IL25|64806|interleukin 25##NM_022789|IL25|64806|interleukin 25##BC104929|IL25|64806|interleukin 25##BC104931|IL25|64806|interleukin 25##AF458059|IL25|64806|interleukin 25##BC069565|IL25|64806|interleukin 25##EU831823|IL25|64806|interleukin 25##EU831900|IL25|64806|interleukin 25##AB001466|EFS|10278|embryonal Fyn-associated substrate##AB001467|EFS|10278|embryonal Fyn-associated substrate##NM_005864|EFS|10278|embryonal Fyn-associated substrate##NM_032459|EFS|10278|embryonal Fyn-associated substrate##BC046403|EFS|10278|embryonal Fyn-associated substrate##AK309494|MYH6|4624|myosin, heavy chain 6, cardiac muscle, alpha##NM_002471|MYH6|4624|myosin, heavy chain 6, cardiac muscle, alpha##X56181|MYH6|4624|myosin, heavy chain 6, cardiac muscle, alpha##M58018|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##AK307590|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##EU747717|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##NM_000257|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##NM_001042635|NGDN|25983|neuroguidin, EIF4E binding protein##NM_015514|NGDN|25983|neuroguidin, EIF4E binding protein##AK124318|NGDN|25983|neuroguidin, EIF4E binding protein	0.837084	CTCF.p2:9:0.837
chr15	80465785	80465920	reg1002257.p1	15.668	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-20476	+	TSC_hg19_v1_chr15_+_80445268 D28440 NM_000137 AK313951	-20600	+	TSC_hg19_v1_chr15_+_80445130 AK297965	-20720	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	230882	+	AK295763 TSC_hg19_v1_chr15_+_80733623	267753	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	521810	+	M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##D28440|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##NM_000137|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK313951|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK297965|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1	0.0	
chr22	18942053	18942180	reg1002827.p1	15.668	+	BC118597 BC121809 NM_001195226 NM_016335 U79754	-18102	-	AB209472 TSC_hg19_v1_chr22_-_18923807 BC068260 BC094736 BC036534	-18385	-	NM_005675 AF228707 TSC_hg19_v1_chr22_+_18893832 AK315115 BC047039 CR456434 AK098780 AB528122 CU012994 CU013282	-48306	+	TSC_hg19_v1_chr22_+_18957980 AB051434	15890	+	CU012993 CU013281 CU691894 DQ894160 FJ032369 CR456433 L77560 X83545 TSC_hg19_v1_chr22_-_19109911 BC032430 D79985	167698	-	TSC_hg19_v1_chr22_-_19109938 BC020339 BC035425 CR936871 AK291670 AK295697 AK296337 AK304382 AK303130 BC040500 NM_001173533 NM_001173534 NM_001184781 NM_005137	167824	-	BC118597|PRODH|5625|proline dehydrogenase (oxidase) 1##BC121809|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_001195226|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_016335|PRODH|5625|proline dehydrogenase (oxidase) 1##U79754|PRODH|5625|proline dehydrogenase (oxidase) 1##AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1##BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1##BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1##BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_005675|DGCR6|8214|DiGeorge syndrome critical region gene 6##AF228707|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK315115|DGCR6|8214|DiGeorge syndrome critical region gene 6##BC047039|DGCR6|8214|DiGeorge syndrome critical region gene 6##CR456434|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK098780|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU012994|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU013282|DGCR6|8214|DiGeorge syndrome critical region gene 6##AB051434|DGCR5|26220|DiGeorge syndrome critical region gene 5 (non-protein coding)##CU012993|DGCR2|9993|DiGeorge syndrome critical region gene 2##CU013281|DGCR2|9993|DiGeorge syndrome critical region gene 2##DQ894160|DGCR2|9993|DiGeorge syndrome critical region gene 2##FJ032369|DGCR2|9993|DiGeorge syndrome critical region gene 2##CR456433|DGCR2|9993|DiGeorge syndrome critical region gene 2##L77560|DGCR2|9993|DiGeorge syndrome critical region gene 2##X83545|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC032430|DGCR2|9993|DiGeorge syndrome critical region gene 2##D79985|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC020339|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC035425|DGCR2|9993|DiGeorge syndrome critical region gene 2##CR936871|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK291670|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK295697|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK296337|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK304382|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK303130|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC040500|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001173533|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001173534|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001184781|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_005137|DGCR2|9993|DiGeorge syndrome critical region gene 2	0.939584	CTCF.p2:-11:0.940
chr9	75207771	75207902	reg1001335.p1	15.667	+	AF417578 NM_138691	-71120	+	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	-227736	-	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	-228111	-	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	360109	-	NM_000689	360396	-	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	558942	+	AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1	0.999283	CTCF.p2:17:0.999
chr22	24571269	24571386	reg1002308.p1	15.666	+	TSC_hg19_v1_chr22_+_24551954 AL390166	-19370	+	TSC_hg19_v1_chr22_+_24407870 AB002328 BC041659	-163432	+	TSC_hg19_v1_chr22_+_24407863 NM_001199281 BC013099 BC028969	-163487	+	TSC_hg19_v1_chr22_+_24577424 AK026431	6100	+	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	6117	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	69652	-	AL390166|CABIN1|23523|calcineurin binding protein 1##AB002328|CABIN1|23523|calcineurin binding protein 1##BC041659|CABIN1|23523|calcineurin binding protein 1##NM_001199281|CABIN1|23523|calcineurin binding protein 1##BC013099|CABIN1|23523|calcineurin binding protein 1##BC028969|CABIN1|23523|calcineurin binding protein 1##AK026431|SUSD2|56241|sushi domain containing 2##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5	0.990562	CTCF.p2:6:0.991
chr13	21685021	21685158	reg1002047.p1	15.665	+	TSC_hg19_v1_chr13_-_21635719 NM_014572	-49373	-	TSC_hg19_v1_chr13_-_21635685 BC127671 AF207547 AB209897 BC071572	-49424	-	TSC_hg19_v1_chr13_-_21476909 NM_022459	-208152	-	NM_005870 TSC_hg19_v1_chr13_+_21714679	29578	+	BC030836 TSC_hg19_v1_chr13_+_21714684	29598	+	TSC_hg19_v1_chr13_+_21714721 AF153608 U78303 AK311748 AY550970 U96915 AB464207 CR457035 CU689040 EU446760	29639	+	NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##NM_022459|XPO4|64328|exportin 4##NM_005870|SAP18|10284|Sin3A-associated protein, 18kDa##BC030836|SAP18|10284|Sin3A-associated protein, 18kDa##AF153608|SAP18|10284|Sin3A-associated protein, 18kDa##U78303|SAP18|10284|Sin3A-associated protein, 18kDa##AK311748|SAP18|10284|Sin3A-associated protein, 18kDa##AY550970|SAP18|10284|Sin3A-associated protein, 18kDa##U96915|SAP18|10284|Sin3A-associated protein, 18kDa##CR457035|SAP18|10284|Sin3A-associated protein, 18kDa##EU446760|SAP18|10284|Sin3A-associated protein, 18kDa	0.742323	CTCF.p2:2:0.742
chr1	45958903	45959037	reg1002256.p1	15.665	+	TSC_hg19_v1_chr1_-_45956836 BX648441 AK027573 AK294172 BC022194 AB057597 AJ132545 AK299269 NM_007170 AK302494	-2137	-	TSC_hg19_v1_chr1_+_45805883 AK298162 AK093320 BC009364 CU679325 CR457320	-153070	+	AB032924 AB032925 AB032926 AB025227 NM_001048174 AB032927 AB032928 AB032929 NM_001048172 NM_001048173 CU678424 AB590565 AB032920 AB032921 AB032922 AB032923 BC003178 AK293830 NM_001048171 NM_001128425 NM_012222	-153097	-	AK098537 NM_015506 TSC_hg19_v1_chr1_+_45965990 AL080062 BC006122	6969	+	X67951 L19184 TSC_hg19_v1_chr1_-_45987557 AK311898 BC007063 AK131049 BC021683 NM_002574 NM_181696 NM_181697	28608	-	NM_001202431	29591	-	BX648441|TESK2|10420|testis-specific kinase 2##AK027573|TESK2|10420|testis-specific kinase 2##AK294172|TESK2|10420|testis-specific kinase 2##BC022194|TESK2|10420|testis-specific kinase 2##AB057597|TESK2|10420|testis-specific kinase 2##AJ132545|TESK2|10420|testis-specific kinase 2##AK299269|TESK2|10420|testis-specific kinase 2##NM_007170|TESK2|10420|testis-specific kinase 2##AK302494|TESK2|10420|testis-specific kinase 2##AK298162|TOE1|114034|target of EGR1, member 1 (nuclear)##AK093320|TOE1|114034|target of EGR1, member 1 (nuclear)##BC009364|TOE1|114034|target of EGR1, member 1 (nuclear)##CR457320|TOE1|114034|target of EGR1, member 1 (nuclear)##AB032924|MUTYH|4595|mutY homolog (E. coli)##AB032925|MUTYH|4595|mutY homolog (E. coli)##AB032926|MUTYH|4595|mutY homolog (E. coli)##AB025227|MUTYH|4595|mutY homolog (E. coli)##NM_001048174|MUTYH|4595|mutY homolog (E. coli)##AB032927|MUTYH|4595|mutY homolog (E. coli)##AB032928|MUTYH|4595|mutY homolog (E. coli)##AB032929|MUTYH|4595|mutY homolog (E. coli)##NM_001048172|MUTYH|4595|mutY homolog (E. coli)##NM_001048173|MUTYH|4595|mutY homolog (E. coli)##AB032920|MUTYH|4595|mutY homolog (E. coli)##AB032921|MUTYH|4595|mutY homolog (E. coli)##AB032922|MUTYH|4595|mutY homolog (E. coli)##AB032923|MUTYH|4595|mutY homolog (E. coli)##BC003178|MUTYH|4595|mutY homolog (E. coli)##AK293830|MUTYH|4595|mutY homolog (E. coli)##NM_001048171|MUTYH|4595|mutY homolog (E. coli)##NM_001128425|MUTYH|4595|mutY homolog (E. coli)##NM_012222|MUTYH|4595|mutY homolog (E. coli)##AK098537|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##NM_015506|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##AL080062|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BC006122|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##X67951|PRDX1|5052|peroxiredoxin 1##L19184|PRDX1|5052|peroxiredoxin 1##AK311898|PRDX1|5052|peroxiredoxin 1##BC007063|PRDX1|5052|peroxiredoxin 1##AK131049|PRDX1|5052|peroxiredoxin 1##BC021683|PRDX1|5052|peroxiredoxin 1##NM_002574|PRDX1|5052|peroxiredoxin 1##NM_181696|PRDX1|5052|peroxiredoxin 1##NM_181697|PRDX1|5052|peroxiredoxin 1##NM_001202431|PRDX1|5052|peroxiredoxin 1	0.996847	CTCF.p2:15:0.997
chr13	100039809	100039971	reg1001680.p2	15.664	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-80192	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-129276	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-186771	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	113810	+	TSC_hg19_v1_chr13_+_100153777 BC130293	113892	+	BC041830 TSC_hg19_v1_chr13_+_100229390	189487	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.914674	CTCF.p2:-9:0.915
chr2	10410800	10410899	reg1001472.p1	15.664	+	BC093999 BC094001 NM_182626	-128870	+	TSC_hg19_v1_chr2_+_10262865 NM_001034 AK092671 AK123010 AK313719 BC030154 BC001886 DQ891863 DQ895052 AB529158	-147960	+	NM_001165931 S40301 X59618 TSC_hg19_v1_chr2_+_10262805	-148090	+	TSC_hg19_v1_chr2_+_10443043 BC017482 NM_002149 BC009846 BC017028	32200	+	AK000596 NM_134421	32976	+	D28365 BC014562 BC025296 X55362 TSC_hg19_v1_chr2_-_10588440	177511	-	BC093999|C2orf48|348738|chromosome 2 open reading frame 48##BC094001|C2orf48|348738|chromosome 2 open reading frame 48##NM_182626|C2orf48|348738|chromosome 2 open reading frame 48##NM_001034|RRM2|6241|ribonucleotide reductase M2##AK092671|RRM2|6241|ribonucleotide reductase M2##AK123010|RRM2|6241|ribonucleotide reductase M2##AK313719|RRM2|6241|ribonucleotide reductase M2##BC030154|RRM2|6241|ribonucleotide reductase M2##BC001886|RRM2|6241|ribonucleotide reductase M2##DQ891863|RRM2|6241|ribonucleotide reductase M2##DQ895052|RRM2|6241|ribonucleotide reductase M2##NM_001165931|RRM2|6241|ribonucleotide reductase M2##S40301|RRM2|6241|ribonucleotide reductase M2##X59618|RRM2|6241|ribonucleotide reductase M2##BC017482|HPCAL1|3241|hippocalcin-like 1##NM_002149|HPCAL1|3241|hippocalcin-like 1##BC009846|HPCAL1|3241|hippocalcin-like 1##BC017028|HPCAL1|3241|hippocalcin-like 1##AK000596|HPCAL1|3241|hippocalcin-like 1##NM_134421|HPCAL1|3241|hippocalcin-like 1##D28365|ODC1|4953|ornithine decarboxylase 1##BC014562|ODC1|4953|ornithine decarboxylase 1##BC025296|ODC1|4953|ornithine decarboxylase 1##X55362|ODC1|4953|ornithine decarboxylase 1	0.0	
chr11	102212600	102212741	reg1002622.p1	15.663	+	NM_001165 NM_182962 TSC_hg19_v1_chr11_+_102188214 AF070674	-24468	+	NM_001195045 AK316116	-229463	+	TSC_hg19_v1_chr11_+_101981177 AK300414 NM_001130145 NM_001195044 NM_006106 BC038235 AB528588 AB567720 AB567721 AY316529	-231468	+	TSC_hg19_v1_chr11_+_102217944 AK303197	5259	+	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	5358	+	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	110943	-	NM_001165|BIRC3|330|baculoviral IAP repeat containing 3##NM_182962|BIRC3|330|baculoviral IAP repeat containing 3##AF070674|BIRC3|330|baculoviral IAP repeat containing 3##NM_001195045|YAP1|10413|Yes-associated protein 1##AK316116|YAP1|10413|Yes-associated protein 1##AK300414|YAP1|10413|Yes-associated protein 1##NM_001130145|YAP1|10413|Yes-associated protein 1##NM_001195044|YAP1|10413|Yes-associated protein 1##NM_006106|YAP1|10413|Yes-associated protein 1##BC038235|YAP1|10413|Yes-associated protein 1##AB567720|YAP1|10413|Yes-associated protein 1##AB567721|YAP1|10413|Yes-associated protein 1##AY316529|YAP1|10413|Yes-associated protein 1##AK303197|BIRC2|329|baculoviral IAP repeat containing 2##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123	0.999709	CTCF.p2:-1:1.000
chr7	75391868	75392006	reg1002377.p1	15.663	+	TSC_hg19_v1_chr7_-_75368305 AF486833 NM_001243198 NM_005338	-23627	-	AF365404 AB385224 TSC_hg19_v1_chr7_-_75368255 AK094866 AK304738 BC110545	-23697	-	BC101598 BC143635 BC087844 BC022886 BC007683 BC014421 BC029646 TSC_hg19_v1_chr7_-_75157432 BC046153	-234752	-	NM_006072 AY358893	27201	-	AJ223461 BC069072 BC069391 NM_002991 U85768 AB590965 CU686790	51092	-	AF226732 TSC_hg19_v1_chr7_+_75508369 NM_001040456 NM_001040457 BC069017 AK026590	116397	+	AF486833|HIP1|3092|huntingtin interacting protein 1##NM_001243198|HIP1|3092|huntingtin interacting protein 1##NM_005338|HIP1|3092|huntingtin interacting protein 1##AF365404|HIP1|3092|huntingtin interacting protein 1##AK094866|HIP1|3092|huntingtin interacting protein 1##AK304738|HIP1|3092|huntingtin interacting protein 1##BC110545|HIP1|3092|huntingtin interacting protein 1##BC101598|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC143635|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC087844|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC007683|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC014421|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC046153|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##NM_006072|CCL26|10344|chemokine (C-C motif) ligand 26##AY358893|CCL26|10344|chemokine (C-C motif) ligand 26##AJ223461|CCL24|6369|chemokine (C-C motif) ligand 24##BC069072|CCL24|6369|chemokine (C-C motif) ligand 24##BC069391|CCL24|6369|chemokine (C-C motif) ligand 24##NM_002991|CCL24|6369|chemokine (C-C motif) ligand 24##U85768|CCL24|6369|chemokine (C-C motif) ligand 24##AF226732|RHBDD2|57414|rhomboid domain containing 2##NM_001040456|RHBDD2|57414|rhomboid domain containing 2##NM_001040457|RHBDD2|57414|rhomboid domain containing 2##BC069017|RHBDD2|57414|rhomboid domain containing 2##AK026590|RHBDD2|57414|rhomboid domain containing 2	0.835488	CTCF.p2:14:0.835
chr4	111236767	111236880	reg1001056.p1	15.660	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	-117038	-	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-402776	+	AK126648 NM_198506	-464338	+	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	160550	+	AK313987 TSC_hg19_v1_chr4_-_111543909	307087	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	307452	-	BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK126648|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_198506|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313987|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2	0.995608	CTCF.p2:-14:0.996
chr1	168572860	168572992	reg1002465.p1	15.657	+	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-27134	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	-59709	-	AJ010277 NM_005149 BC093664 BC093666 EU446671	-322624	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	125503	-	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	503043	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	764166	-	NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##AJ010277|TBX19|9095|T-box 19##NM_005149|TBX19|9095|T-box 19##BC093664|TBX19|9095|T-box 19##BC093666|TBX19|9095|T-box 19##EU446671|TBX19|9095|T-box 19##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	0.798971	CTCF.p2:-10:0.799
chr14	94468244	94468362	reg1001209.p2	15.656	+	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	-25227	-	AK303686 TSC_hg19_v1_chr14_-_94442905	-25395	-	AB056723 NM_016150	-44537	-	TSC_hg19_v1_chr14_+_94492685 BC009615 BC068058 NM_023112	24400	+	AK025569 TSC_hg19_v1_chr14_+_94492747	24445	+	AB209382 AF161446 AK294613 TSC_hg19_v1_chr14_-_94547557 BC096826 AL136886 BC008847 BC009406 BX537533 AK296726 AK297232 AK304504 AK025162 AF214731 NM_020414	79223	-	AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##AK025569|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##AB209382|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AF161446|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK294613|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC096826|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AL136886|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC008847|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC009406|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BX537533|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK296726|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK297232|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK304504|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK025162|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AF214731|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##NM_020414|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24	0.984983	CTCF.p2:5:0.985
chr6	88639636	88639778	reg1001414.p1	15.656	+	AK001204 NM_018064 TSC_hg19_v1_chr6_-_88411988	-227719	-	TSC_hg19_v1_chr6_-_88411949 AK222701	-227759	-	TSC_hg19_v1_chr6_-_88411885 BC000764 BC003042	-227798	-	BC029488 NM_030960 AF203447	117823	+	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	215329	-	NM_001160226 NM_001160258 NM_001160259 NM_016083	236059	-	AK001204|AKIRIN2|55122|akirin 2##NM_018064|AKIRIN2|55122|akirin 2##AK222701|AKIRIN2|55122|akirin 2##BC000764|AKIRIN2|55122|akirin 2##BC003042|AKIRIN2|55122|akirin 2##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)	0.954934	CTCF.p2:-1:0.955
chr1	183885209	183885354	reg1002199.p1	15.654	+	AK311716 TSC_hg19_v1_chr1_+_183774253 AF186779 AB023176 AK304293 BC039250 AK309237 AK311701	-110990	+	BC021711 NM_203454 AK098557	-262833	-	NM_015149 AF186780 BX537416 AK316526 AK295179 AK295611 BC136591	-279939	+	AB385353 CU690156 AK293973 TSC_hg19_v1_chr1_-_184006634	121284	-	AB011156 AF288389 NM_015101 BC035672 AK095192 TSC_hg19_v1_chr1_-_184006893	121583	-	TSC_hg19_v1_chr1_+_184020866 AF288394 NM_001127394 NM_052965 BC022030 AK098196 CU692464 AK296655 AK307241	135579	+	AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC021711|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##NM_203454|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##AK098557|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK293973|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AB011156|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AF288389|GLT25D2|23127|glycosyltransferase 25 domain containing 2##NM_015101|GLT25D2|23127|glycosyltransferase 25 domain containing 2##BC035672|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AK095192|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AF288394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##NM_001127394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##NM_052965|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##BC022030|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AK098196|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AK296655|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AK307241|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	0.999735	CTCF.p2:15:1.000
chr1	27524531	27524667	reg1001692.p1	15.654	+	M96066 S68616 NM_003047 TSC_hg19_v1_chr1_-_27481521	-43138	-	TSC_hg19_v1_chr1_-_27339448 AK122816	-185145	-	BC012790 BC014160 NM_052943 TSC_hg19_v1_chr1_-_27339338	-185265	-	NM_015023 TSC_hg19_v1_chr1_+_27561056	36435	+	TSC_hg19_v1_chr1_+_27561124 AK315564	36528	+	TSC_hg19_v1_chr1_+_27561153 BC032523	36563	+	M96066|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##S68616|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_003047|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##AK122816|FAM46B|115572|family with sequence similarity 46, member B##BC012790|FAM46B|115572|family with sequence similarity 46, member B##BC014160|FAM46B|115572|family with sequence similarity 46, member B##NM_052943|FAM46B|115572|family with sequence similarity 46, member B##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1##BC032523|WDTC1|23038|WD and tetratricopeptide repeats 1	0.996706	CTCF.p2:0:0.997
chr17	17400228	17400357	reg1001815.p1	15.653	+	AB528221 AF153192 AF498923 AM392981 AM393158 AM393716 CU676146 AF172846 AF069506 BC042688 AF177335 TSC_hg19_v1_chr17_-_17399710 BC018041 AK294073 AK312796 NM_001199989 NM_016084	-690	-	TSC_hg19_v1_chr17_+_17398334 CU676147	-1906	+	TSC_hg19_v1_chr17_+_17380313 AK001055 NM_018019 BC000647 BC010906 BC104988 BC112029 AB463869	-19977	+	CR457099 TSC_hg19_v1_chr17_-_17480354	80047	-	AF176807 NM_148173	80486	-	AF176806 TSC_hg19_v1_chr17_-_17485724	85415	-	AF153192|RASD1|51655|RAS, dexamethasone-induced 1##AF498923|RASD1|51655|RAS, dexamethasone-induced 1##AM392981|RASD1|51655|RAS, dexamethasone-induced 1##AM393158|RASD1|51655|RAS, dexamethasone-induced 1##AM393716|RASD1|51655|RAS, dexamethasone-induced 1##AF172846|RASD1|51655|RAS, dexamethasone-induced 1##AF069506|RASD1|51655|RAS, dexamethasone-induced 1##BC042688|RASD1|51655|RAS, dexamethasone-induced 1##AF177335|RASD1|51655|RAS, dexamethasone-induced 1##BC018041|RASD1|51655|RAS, dexamethasone-induced 1##AK294073|RASD1|51655|RAS, dexamethasone-induced 1##AK312796|RASD1|51655|RAS, dexamethasone-induced 1##NM_001199989|RASD1|51655|RAS, dexamethasone-induced 1##NM_016084|RASD1|51655|RAS, dexamethasone-induced 1##AK001055|MED9|55090|mediator complex subunit 9##NM_018019|MED9|55090|mediator complex subunit 9##BC000647|MED9|55090|mediator complex subunit 9##BC010906|MED9|55090|mediator complex subunit 9##BC104988|MED9|55090|mediator complex subunit 9##BC112029|MED9|55090|mediator complex subunit 9##CR457099|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF176807|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_148173|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF176806|PEMT|10400|phosphatidylethanolamine N-methyltransferase	0.997308	CTCF.p2:3:0.997
chr5	149016486	149016634	reg1002502.p1	15.653	+	AK300559 AK316002 BC041325 NM_001001669	-55476	+	TSC_hg19_v1_chr5_-_148931006 NM_001025105 NM_001892	-85554	-	TSC_hg19_v1_chr5_-_148930950 AK294942	-85594	-	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	93267	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	93316	+	AK123614 NM_001172699	134942	+	AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##NM_001025105|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001892|CSNK1A1|1452|casein kinase 1, alpha 1##AK294942|CSNK1A1|1452|casein kinase 1, alpha 1##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	0.999933	CTCF.p2:-14:1.000
chr2	69951903	69952021	reg1000738.p1	15.652	+	NM_014911 TSC_hg19_v1_chr2_-_69871063 BC090950	-80870	-	TSC_hg19_v1_chr2_-_69870872 AB028971	-81105	-	TSC_hg19_v1_chr2_-_69870783 AK310951 AK056043	-81194	-	BC063672 NM_001153 BC000182 TSC_hg19_v1_chr2_+_69969232 AK293177	17208	+	BC011659 TSC_hg19_v1_chr2_+_69969265 AK293406 AK303960 AK058017 AK315511 AK293396 M19383 M82809	17303	+	AK024042 TSC_hg19_v1_chr2_+_70056791 BC007420 NM_178439 AK023119	104845	+	NM_014911|AAK1|22848|AP2 associated kinase 1##BC090950|AAK1|22848|AP2 associated kinase 1##AB028971|AAK1|22848|AP2 associated kinase 1##AK310951|AAK1|22848|AP2 associated kinase 1##AK056043|AAK1|22848|AP2 associated kinase 1##BC063672|ANXA4|307|annexin A4##NM_001153|ANXA4|307|annexin A4##BC000182|ANXA4|307|annexin A4##AK293177|ANXA4|307|annexin A4##BC011659|ANXA4|307|annexin A4##AK293406|ANXA4|307|annexin A4##AK303960|ANXA4|307|annexin A4##AK058017|ANXA4|307|annexin A4##AK315511|ANXA4|307|annexin A4##AK293396|ANXA4|307|annexin A4##M19383|ANXA4|307|annexin A4##M82809|ANXA4|307|annexin A4##AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	0.986837	CTCF.p2:0:0.987
chr7	128850424	128850576	reg1002208.p1	15.650	+	BC009989 NM_005631	-21788	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-155295	-	TSC_hg19_v1_chr7_-_128695168 BC009923	-155352	-	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	14329	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	157486	+	TSC_hg19_v1_chr7_+_129008062 AK025372	157588	+	BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3##NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2	0.999465	CTCF.p2:12:0.999
chr7	43622393	43622505	reg1001215.p2	15.649	+	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	-470223	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-650480	+	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	-650648	-	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	245	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	146645	-	TSC_hg19_v1_chr7_+_43798278 NM_000712 NM_001253823 BC005902 BC008456	175818	+	AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44##NM_000712|BLVRA|644|biliverdin reductase A##NM_001253823|BLVRA|644|biliverdin reductase A##BC005902|BLVRA|644|biliverdin reductase A##BC008456|BLVRA|644|biliverdin reductase A	0.187205	
chr4	26331944	26332078	reg1002707.p1	15.644	+	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	-9329	+	TSC_hg19_v1_chr4_+_26322635 AK302230	-9375	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	-9702	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	159974	-	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	253669	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	530529	+	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2	0.817718	CTCF.p2:-3:0.818
chr7	148272813	148272951	reg1002414.p1	15.644	+	TSC_hg19_v1_chr7_+_148036552 CR933671	-236317	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-2458998	+	NM_014141	-2459430	+	BC021251 NM_145304	14774	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	123058	+	TSC_hg19_v1_chr7_+_148396012 BX537409	123122	+	CR933671|CNTNAP2|26047|contactin associated protein-like 2##AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1##BX537409|CUL1|8454|cullin 1	0.879001	CTCF.p2:-5:0.879
chr1	42039898	42040020	reg1001875.p1	15.643	+	BC034393 X55177 M65199 NM_001956	-89640	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-332123	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-332174	-	TSC_hg19_v1_chr1_-_42384357 BC040942	344383	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	344414	-	TSC_hg19_v1_chr1_-_42501606 BC046120	461670	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.010761	
chr18	43554156	43554299	reg1002439.p1	15.642	+	AB046852 TSC_hg19_v1_chr18_-_43547294 NM_020964	-6949	-	AK172835 NM_213602 AY971516 AK290402 AK290400 AK095432	-148603	+	NM_001146037	-247310	+	DQ893199 DQ893200 DQ893201 DQ893695 DQ896527 DQ896528 DQ896529 TSC_hg19_v1_chr18_-_43652247 BC035395 BC008216 NM_024430	97981	-	TSC_hg19_v1_chr18_-_43668143 AK129804	113950	-	TSC_hg19_v1_chr18_-_43669608 BC003119	115372	-	AB046852|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##NM_020964|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##AK172835|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_213602|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AY971516|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290402|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290400|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK095432|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##DQ893199|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893200|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893201|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893695|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896527|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896528|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896529|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##BC035395|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##NM_024430|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##AK129804|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##BC003119|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	0.999495	CTCF.p2:8:0.999
chr1	85219336	85219468	reg1001560.p1	15.640	+	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-63326	-	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-179296	-	TSC_hg19_v1_chr1_-_84972262 NM_005274	-247133	-	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	139484	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	243306	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	294743	-	AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##NM_005274|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3	0.687843	CTCF.p2:15:0.610
chr12	56967298	56967427	reg1002530.p1	15.638	+	TSC_hg19_v1_chr12_+_56915603 NM_002898 BC072679 AK308885 AK293315 AK304540 D28483 AK299580 BC027863 CU693300	-51665	+	AK289471 BC025661 BC036929 AK000467 AF110330 AK303772 AF223944 AK294822 BC119767 BC119768 BC059370 BC048344 NM_013267	-85322	-	NM_207344 TSC_hg19_v1_chr12_+_56862350 AF451989 AK300594 AL832247 BC020844 AK291920 BX647957 AK074733 AF289571	-105010	+	AF000422 TSC_hg19_v1_chr12_-_57006969	39554	-	AK023830 TSC_hg19_v1_chr12_-_57009380	42014	-	AK023842 TSC_hg19_v1_chr12_-_57024088	56680	-	NM_002898|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC072679|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK308885|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK293315|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK304540|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##D28483|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK299580|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC027863|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK289471|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC025661|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC036929|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK000467|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF110330|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK303772|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF223944|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK294822|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119767|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119768|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC059370|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC048344|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_013267|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_207344|SPRYD4|283377|SPRY domain containing 4##AF451989|SPRYD4|283377|SPRY domain containing 4##AK300594|SPRYD4|283377|SPRY domain containing 4##AL832247|SPRYD4|283377|SPRY domain containing 4##BC020844|SPRYD4|283377|SPRY domain containing 4##AK291920|SPRYD4|283377|SPRY domain containing 4##BX647957|SPRYD4|283377|SPRY domain containing 4##AK074733|SPRYD4|283377|SPRY domain containing 4##AF289571|SPRYD4|283377|SPRY domain containing 4##AF000422|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023830|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023842|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A	0.998509	CTCF.p2:-15:0.999
chr10	134451417	134451553	reg1002160.p1	15.637	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	-100173	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-192802	+	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	-240776	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	148021	-	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	304553	-	NM_001083909 TSC_hg19_v1_chr10_+_134901429 AK124728	449972	+	BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40##NM_001083909|GPR123|84435|G protein-coupled receptor 123##AK124728|GPR123|84435|G protein-coupled receptor 123	0.74137	CTCF.p2:17:0.741
chr15	89244936	89245055	reg1002006.p1	15.636	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	-62809	+	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	-80425	+	BC109060 BC109061 BC073867 AK054603 BC064591 AB073887 NM_001144074 NM_017996	-155144	-	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	101691	+	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	193803	-	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	211565	-	BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein	0.849791	CTCF.p2:8:0.850
chr21	34199021	34199151	reg1001498.p1	15.636	+	BC069689 BC069709 BC069766 BC069779 AF231922 AK290983 DQ656042 NM_001162495 NM_001162496 NM_019596	-13089	-	AK096601 BC034794 TSC_hg19_v1_chr21_+_34144471 BC117397 BC117399	-54623	+	AY033903 AY033904 AY033905 AY033906 TSC_hg19_v1_chr21_-_34144044 AJ279080 AJ279081 AK309404 BC030539 BC084542 BC062992 NM_013329 NM_016631	-55012	-	TSC_hg19_v1_chr21_+_34398242 NM_005806 AK091462 BC047511 BC036245 BC034681 BC036275 AF221520	199165	+	TSC_hg19_v1_chr21_+_34442446 BC033290 NM_138983 AL834450 AB209791	243366	+	TSC_hg19_v1_chr21_+_34442554 AB463154 DQ896828 BC026989	243475	+	BC069689|C21orf62|56245|chromosome 21 open reading frame 62##BC069709|C21orf62|56245|chromosome 21 open reading frame 62##BC069766|C21orf62|56245|chromosome 21 open reading frame 62##BC069779|C21orf62|56245|chromosome 21 open reading frame 62##AF231922|C21orf62|56245|chromosome 21 open reading frame 62##AK290983|C21orf62|56245|chromosome 21 open reading frame 62##DQ656042|C21orf62|56245|chromosome 21 open reading frame 62##NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62##NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62##NM_019596|C21orf62|56245|chromosome 21 open reading frame 62##AK096601|C21orf49|54067|chromosome 21 open reading frame 49##BC034794|C21orf49|54067|chromosome 21 open reading frame 49##BC117397|C21orf49|54067|chromosome 21 open reading frame 49##BC117399|C21orf49|54067|chromosome 21 open reading frame 49##AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_005806|OLIG2|10215|oligodendrocyte lineage transcription factor 2##AK091462|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC047511|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC036245|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC034681|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC036275|OLIG2|10215|oligodendrocyte lineage transcription factor 2##AF221520|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC033290|OLIG1|116448|oligodendrocyte transcription factor 1##NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1##AL834450|OLIG1|116448|oligodendrocyte transcription factor 1##AB209791|OLIG1|116448|oligodendrocyte transcription factor 1##DQ896828|OLIG1|116448|oligodendrocyte transcription factor 1##BC026989|OLIG1|116448|oligodendrocyte transcription factor 1	0.901244	CTCF.p2:8:0.901
chr4	113445075	113445256	reg1001600.p3	15.636	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	-7833	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	-226638	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	-238164	-	TSC_hg19_v1_chr4_-_113558057 BC044799 BC028584 AK002193	112881	-	NM_016648	112954	+	TSC_hg19_v1_chr4_-_113558120 AK302613 AK299831 NM_018392	112970	-	BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC044799|C4orf21|55345|chromosome 4 open reading frame 21##BC028584|C4orf21|55345|chromosome 4 open reading frame 21##AK002193|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7##AK302613|C4orf21|55345|chromosome 4 open reading frame 21##AK299831|C4orf21|55345|chromosome 4 open reading frame 21##NM_018392|C4orf21|55345|chromosome 4 open reading frame 21	1.054531	CTCF.p2:54:0.994
chr14	25148263	25148386	reg1001532.p1	15.634	+	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-44906	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-69463	-	AB590242 CR456807 CR541704 DQ893067 DQ896320 M16117 TSC_hg19_v1_chr14_-_25045457 AK225914 BC014460 NM_001911	-102878	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	370914	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1918664	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	4087904	+	AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##CR456807|CTSG|1511|cathepsin G##CR541704|CTSG|1511|cathepsin G##DQ893067|CTSG|1511|cathepsin G##DQ896320|CTSG|1511|cathepsin G##M16117|CTSG|1511|cathepsin G##AK225914|CTSG|1511|cathepsin G##BC014460|CTSG|1511|cathepsin G##NM_001911|CTSG|1511|cathepsin G##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1	1.039287	CTCF.p2:-18:0.992
chr3	73551948	73552076	reg1001845.p1	15.633	+	BC051316 BC064501 NM_018029	-441203	+	TSC_hg19_v1_chr3_+_73046081 AF327345 NM_174907 BC128136 BC128137	-505892	+	TSC_hg19_v1_chr3_+_73045984 BC110889	-506021	+	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	122026	-	AB384611 BC150608 NM_020872	1018290	-	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	1932137	-	BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene	0.977102	CTCF.p2:17:0.977
chr7	43300993	43301139	reg1002862.p1	15.633	+	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	-148840	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-329097	+	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	-329265	-	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	321628	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	468028	-	TSC_hg19_v1_chr7_+_43798278 NM_000712 NM_001253823 BC005902 BC008456	497201	+	AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44##NM_000712|BLVRA|644|biliverdin reductase A##NM_001253823|BLVRA|644|biliverdin reductase A##BC005902|BLVRA|644|biliverdin reductase A##BC008456|BLVRA|644|biliverdin reductase A	0.999712	CTCF.p2:-11:1.000
chr9	35882368	35882475	reg1001671.p1	15.633	+	AY726589 NM_001004487 BC136715 BC136716	-12033	-	TSC_hg19_v1_chr9_+_35829375 BC064951 NM_001042590 BC082765	-52943	+	TSC_hg19_v1_chr9_+_35829262 NM_016446 BC043384 NM_001042589 AF188239	-53178	+	AY358408 NM_001039792	23767	+	HQ258184 BC104869 BC113651 NM_019897	75701	-	TSC_hg19_v1_chr9_+_36036901 AK292653 NM_021111 AK315073 BC050306 BC032240 BC060806 BC137093 CU687432	154526	+	AY726589|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##NM_001004487|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136715|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136716|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC064951|TMEM8B|51754|transmembrane protein 8B##NM_001042590|TMEM8B|51754|transmembrane protein 8B##BC082765|TMEM8B|51754|transmembrane protein 8B##NM_016446|TMEM8B|51754|transmembrane protein 8B##BC043384|TMEM8B|51754|transmembrane protein 8B##NM_001042589|TMEM8B|51754|transmembrane protein 8B##AF188239|TMEM8B|51754|transmembrane protein 8B##AY358408|HRCT1|646962|histidine rich carboxyl terminus 1##NM_001039792|HRCT1|646962|histidine rich carboxyl terminus 1##HQ258184|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC104869|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC113651|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##NM_019897|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	0.998726	CTCF.p2:5:0.999
chr11	7374367	7374493	reg1002370.p1	15.631	+	AK055003 AB527847 CU692338 TSC_hg19_v1_chr11_+_7273475	-100993	+	TSC_hg19_v1_chr11_+_7273164 BC046367 NM_175733 AK315013	-101237	+	NM_014469 AK292271 AF069682 BC057796 BC029295 AB527964	-264173	+	NM_198474 BX647908 BC092488 TSC_hg19_v1_chr11_+_7506763 AK298137 BC035895 AK297778	132287	+	NM_003621 BC021714 TSC_hg19_v1_chr11_+_7535171	160673	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	160813	+	AK055003|SYT9|143425|synaptotagmin IX##BC046367|SYT9|143425|synaptotagmin IX##NM_175733|SYT9|143425|synaptotagmin IX##AK315013|SYT9|143425|synaptotagmin IX##NM_014469|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AK292271|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AF069682|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC057796|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC029295|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##NM_198474|OLFML1|283298|olfactomedin-like 1##BX647908|OLFML1|283298|olfactomedin-like 1##BC092488|OLFML1|283298|olfactomedin-like 1##AK298137|OLFML1|283298|olfactomedin-like 1##BC035895|OLFML1|283298|olfactomedin-like 1##AK297778|OLFML1|283298|olfactomedin-like 1##NM_003621|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##BC021714|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)	0.975634	CTCF.p2:-8:0.976
chr20	37676804	37676931	reg1002015.p1	15.630	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-85878	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-121799	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-121878	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1641010	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1980627	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1980797	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.999917	CTCF.p2:11:1.000
chr17	60781247	60781371	reg1002569.p1	15.625	+	TSC_hg19_v1_chr17_+_60705060 BC150212 AF107292 AB384513	-76202	+	BC146647 TSC_hg19_v1_chr17_+_60705048 AF134838	-76264	+	TSC_hg19_v1_chr17_+_60704751 AB014609 BC153884 NM_006039	-76552	+	NM_001100875 BC035021	102702	-	AK122947 AK093076 AX747906 BX648705 NM_152598	104368	-	NM_025185	305588	+	BC150212|MRC2|9902|mannose receptor, C type 2##AF107292|MRC2|9902|mannose receptor, C type 2##BC146647|MRC2|9902|mannose receptor, C type 2##AF134838|MRC2|9902|mannose receptor, C type 2##AB014609|MRC2|9902|mannose receptor, C type 2##BC153884|MRC2|9902|mannose receptor, C type 2##NM_006039|MRC2|9902|mannose receptor, C type 2##NM_001100875|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC035021|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	0.253696	CTCF.p2:-2:0.254
chr7	5534375	5534512	reg1001378.p1	15.622	+	NM_001080495	-71267	-	AY129022 TSC_hg19_v1_chr7_-_5461555	-72902	-	TSC_hg19_v1_chr7_-_5460842 BC140723	-73537	-	CU692902 TSC_hg19_v1_chr7_-_5553380 AK057042 BC006426 BC024256 NM_024963	18908	-	TSC_hg19_v1_chr7_-_5553435 AK130444 AK294949	18984	-	M28424 V00478 TSC_hg19_v1_chr7_-_5567980 HQ154074 DQ407611 EF036500	33569	-	NM_001080495|TNRC18|84629|trinucleotide repeat containing 18##AY129022|TNRC18|84629|trinucleotide repeat containing 18##AK057042|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC006426|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC024256|FBXL18|80028|F-box and leucine-rich repeat protein 18##NM_024963|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK130444|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK294949|FBXL18|80028|F-box and leucine-rich repeat protein 18##M28424|ACTB|60|actin, beta##V00478|ACTB|60|actin, beta##DQ407611|ACTB|60|actin, beta##EF036500|ACTB|60|actin, beta	0.967709	CTCF.p2:-18:0.968
chr19	18561838	18561966	reg1001916.p1	15.621	+	AK296022 TSC_hg19_v1_chr19_-_18548975 AK092179 AX747394 NM_001170938 NM_016368	-12862	-	CU676344 DQ893465 DQ896336 AK001325 TSC_hg19_v1_chr19_-_18548942 AK093461 NM_001170939 AF207640 BC018952 AF086921 BC017189 BC066902 AF220530 AK021526	-13026	-	AL137749 NM_001253389	-13784	-	AB208794 TSC_hg19_v1_chr19_-_18632875 AK293105 AK225481 U16282	70964	-	TSC_hg19_v1_chr19_-_18632948 BC049195 NM_006532	71025	-	TSC_hg19_v1_chr19_-_18653874 AK300571	91875	-	AK296022|ISYNA1|51477|inositol-3-phosphate synthase 1##AK092179|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001170938|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_016368|ISYNA1|51477|inositol-3-phosphate synthase 1##DQ893465|ISYNA1|51477|inositol-3-phosphate synthase 1##DQ896336|ISYNA1|51477|inositol-3-phosphate synthase 1##AK001325|ISYNA1|51477|inositol-3-phosphate synthase 1##AK093461|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001170939|ISYNA1|51477|inositol-3-phosphate synthase 1##AF207640|ISYNA1|51477|inositol-3-phosphate synthase 1##BC018952|ISYNA1|51477|inositol-3-phosphate synthase 1##AF086921|ISYNA1|51477|inositol-3-phosphate synthase 1##BC066902|ISYNA1|51477|inositol-3-phosphate synthase 1##AF220530|ISYNA1|51477|inositol-3-phosphate synthase 1##AK021526|ISYNA1|51477|inositol-3-phosphate synthase 1##AL137749|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001253389|ISYNA1|51477|inositol-3-phosphate synthase 1##AB208794|ELL|8178|elongation factor RNA polymerase II##AK293105|ELL|8178|elongation factor RNA polymerase II##AK225481|ELL|8178|elongation factor RNA polymerase II##U16282|ELL|8178|elongation factor RNA polymerase II##BC049195|ELL|8178|elongation factor RNA polymerase II##NM_006532|ELL|8178|elongation factor RNA polymerase II##AK300571|FKBP8|23770|FK506 binding protein 8, 38kDa	0.984767	CTCF.p2:0:0.973
chr21	45395453	45395590	reg1001527.p1	15.621	+	AK300562 NM_001037553	-50243	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	-110398	+	TSC_hg19_v1_chr21_+_45285029 AY358704	-110461	+	TSC_hg19_v1_chr21_+_45432211 BC071569 NM_003274 U61500 BC046241 BC052247 BC094823 U19252 BC101728 AB385171 CU692332	36819	+	TSC_hg19_v1_chr21_+_45527202 AK314184	131681	+	TSC_hg19_v1_chr21_+_45527251 NM_005049	131707	+	AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC071569|TRAPPC10|7109|trafficking protein particle complex 10##NM_003274|TRAPPC10|7109|trafficking protein particle complex 10##U61500|TRAPPC10|7109|trafficking protein particle complex 10##BC046241|TRAPPC10|7109|trafficking protein particle complex 10##BC052247|TRAPPC10|7109|trafficking protein particle complex 10##BC094823|TRAPPC10|7109|trafficking protein particle complex 10##U19252|TRAPPC10|7109|trafficking protein particle complex 10##BC101728|TRAPPC10|7109|trafficking protein particle complex 10##AK314184|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##NM_005049|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)	0.816519	CTCF.p2:14:0.817
chr8	134221624	134221750	reg1002294.p1	15.621	+	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-18357	+	NM_001045556 NM_001045557	-106378	-	AJ238591 TSC_hg19_v1_chr8_-_134087273 AK310108 AK310115	-134415	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	87810	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	362410	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1487107	-	AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##AJ238591|SLA|6503|Src-like-adaptor##AK310108|SLA|6503|Src-like-adaptor##AK310115|SLA|6503|Src-like-adaptor##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.992929	CTCF.p2:-3:0.993
chr2	110734040	110734160	reg1001707.p2	15.620	+	BC094740 NM_001205288 NM_033514	-78092	+	NM_005054 U64675	-182135	+	AL136868 NM_001037866 NM_001123363 NM_032260	-183766	+	U17077 AB590150 DQ892870 DQ896118 TSC_hg19_v1_chr2_-_110873397 BC003179	139305	-	TSC_hg19_v1_chr2_-_110873536 AK311353	139465	-	TSC_hg19_v1_chr2_-_110873641 AK056616	139544	-	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U17077|MALL|7851|mal, T-cell differentiation protein-like##DQ892870|MALL|7851|mal, T-cell differentiation protein-like##DQ896118|MALL|7851|mal, T-cell differentiation protein-like##BC003179|MALL|7851|mal, T-cell differentiation protein-like##AK311353|MALL|7851|mal, T-cell differentiation protein-like##AK056616|MALL|7851|mal, T-cell differentiation protein-like	0.359056	CTCF.p2:17:0.359
chr10	5665223	5665350	reg1002213.p1	15.614	+	AK313934 M58026 NM_005185 BC031889 AB590316	-98301	+	AB590761 AF172852 BC039172 AK222744 NM_017422	-123820	-	TSC_hg19_v1_chr10_+_5488571 NM_005863 AK294244 AK304028 AK315566 AK024919 AJ010046 BC010285 CU679671	-176663	+	TSC_hg19_v1_chr10_-_5708534 CR457302 BC012056 AF403031 AK023196	43240	-	AK292071 TSC_hg19_v1_chr10_-_5708559 AK091935 AX747265 NM_024701	43271	-	TSC_hg19_v1_chr10_+_5726806 CR936780 NM_017782	61537	+	AK313934|CALML3|810|calmodulin-like 3##M58026|CALML3|810|calmodulin-like 3##NM_005185|CALML3|810|calmodulin-like 3##BC031889|CALML3|810|calmodulin-like 3##AF172852|CALML5|51806|calmodulin-like 5##BC039172|CALML5|51806|calmodulin-like 5##AK222744|CALML5|51806|calmodulin-like 5##NM_017422|CALML5|51806|calmodulin-like 5##NM_005863|NET1|10276|neuroepithelial cell transforming 1##AK294244|NET1|10276|neuroepithelial cell transforming 1##AK304028|NET1|10276|neuroepithelial cell transforming 1##AK315566|NET1|10276|neuroepithelial cell transforming 1##AK024919|NET1|10276|neuroepithelial cell transforming 1##AJ010046|NET1|10276|neuroepithelial cell transforming 1##BC010285|NET1|10276|neuroepithelial cell transforming 1##CR457302|ASB13|79754|ankyrin repeat and SOCS box containing 13##BC012056|ASB13|79754|ankyrin repeat and SOCS box containing 13##AF403031|ASB13|79754|ankyrin repeat and SOCS box containing 13##AK023196|ASB13|79754|ankyrin repeat and SOCS box containing 13##AK292071|ASB13|79754|ankyrin repeat and SOCS box containing 13##AK091935|ASB13|79754|ankyrin repeat and SOCS box containing 13##NM_024701|ASB13|79754|ankyrin repeat and SOCS box containing 13##CR936780|FAM208B|54906|family with sequence similarity 208, member B##NM_017782|FAM208B|54906|family with sequence similarity 208, member B	0.618639	CTCF.p2:4:0.619
chr1	40498084	40498203	reg1002182.p1	15.614	+	TSC_hg19_v1_chr1_+_40420841 BC092414 BC069694 BC069771 AK074186 CU679972	-77243	+	TSC_hg19_v1_chr1_+_40420821 BC011587 AK075183 AK301533 AB073383 AK027396 AK297991 AK093223 AK291540 AX747998 AF289609 AL834184	-77325	+	TSC_hg19_v1_chr1_+_40420783 NM_001136493 NM_032793	-77358	+	NM_001105530 NM_006367 TSC_hg19_v1_chr1_+_40506299	8134	+	TSC_hg19_v1_chr1_+_40506349 AK315731	8206	+	TSC_hg19_v1_chr1_+_40506400 AK297829 AK300861 AK096193	8250	+	BC092414|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK074186|MFSD2A|84879|major facilitator superfamily domain containing 2A##BC011587|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK075183|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK301533|MFSD2A|84879|major facilitator superfamily domain containing 2A##AB073383|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK027396|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK297991|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK093223|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK291540|MFSD2A|84879|major facilitator superfamily domain containing 2A##AF289609|MFSD2A|84879|major facilitator superfamily domain containing 2A##AL834184|MFSD2A|84879|major facilitator superfamily domain containing 2A##NM_001136493|MFSD2A|84879|major facilitator superfamily domain containing 2A##NM_032793|MFSD2A|84879|major facilitator superfamily domain containing 2A##NM_001105530|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##NM_006367|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK315731|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK297829|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK300861|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK096193|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)	0.997988	CTCF.p2:2:0.998
chr12	53815479	53815596	reg1001407.p2	15.612	+	BC043224 NM_003109	-41113	+	TSC_hg19_v1_chr12_+_53773935 BC062539 NM_001251825 NM_138473 AF255682 AJ272134	-41547	+	AY150674 NM_001173467	-85534	-	NM_001164690 NM_001164691 NM_020547 AK313593 AF172932 BC126316 BC136356 AY714878 HQ258327	2141	+	TSC_hg19_v1_chr12_+_53818869 CR627318	3329	+	NM_001005354 NM_018457 BC001464 TSC_hg19_v1_chr12_+_53835537 AF217517 AK296930 BC014257 BC016064 BC066943 AK074398 BX640962 BC062322 BC021019	19960	+	BC043224|SP1|6667|Sp1 transcription factor##NM_003109|SP1|6667|Sp1 transcription factor##BC062539|SP1|6667|Sp1 transcription factor##NM_001251825|SP1|6667|Sp1 transcription factor##NM_138473|SP1|6667|Sp1 transcription factor##AF255682|SP1|6667|Sp1 transcription factor##AJ272134|SP1|6667|Sp1 transcription factor##AY150674|SP7|121340|Sp7 transcription factor##NM_001173467|SP7|121340|Sp7 transcription factor##NM_001164690|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_001164691|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_020547|AMHR2|269|anti-Mullerian hormone receptor, type II##AK313593|AMHR2|269|anti-Mullerian hormone receptor, type II##AF172932|AMHR2|269|anti-Mullerian hormone receptor, type II##BC126316|AMHR2|269|anti-Mullerian hormone receptor, type II##BC136356|AMHR2|269|anti-Mullerian hormone receptor, type II##AY714878|AMHR2|269|anti-Mullerian hormone receptor, type II##HQ258327|AMHR2|269|anti-Mullerian hormone receptor, type II##CR627318|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_001005354|PRR13|54458|proline rich 13##NM_018457|PRR13|54458|proline rich 13##BC001464|PRR13|54458|proline rich 13##AF217517|PRR13|54458|proline rich 13##BC014257|PRR13|54458|proline rich 13##BC016064|PRR13|54458|proline rich 13##BC066943|PRR13|54458|proline rich 13##AK074398|PRR13|54458|proline rich 13##BX640962|PRR13|54458|proline rich 13##BC062322|PRR13|54458|proline rich 13##BC021019|PRR13|54458|proline rich 13	0.992758	CTCF.p2:4:0.993
chr11	67124443	67124573	reg1002132.p1	15.609	+	AF179890 BC001334 TSC_hg19_v1_chr11_-_67121006 BC070250 AB209274 NM_021173	-3504	-	AK096155 TSC_hg19_v1_chr11_+_67085309	-39194	+	TSC_hg19_v1_chr11_+_67071027 AK074432 AK001790 AK094226 BC007709 AB527672 AB072360 AB099291	-53467	+	DQ891525 DQ894715 AB528390 AY049779 BC066229 BC066230 BC066231 AF172854 BC012939 AF176911 NM_013246	16598	-	AK298052 NM_001166212	17139	-	TSC_hg19_v1_chr11_+_67159464 BC014848 NM_004584 U53174 AK315348 CR536508	34960	+	AF179890|POLD4|57804|polymerase (DNA-directed), delta 4##BC001334|POLD4|57804|polymerase (DNA-directed), delta 4##BC070250|POLD4|57804|polymerase (DNA-directed), delta 4##AB209274|POLD4|57804|polymerase (DNA-directed), delta 4##NM_021173|POLD4|57804|polymerase (DNA-directed), delta 4##AK096155|LOC100130987|100130987|uncharacterized LOC100130987##AK074432|SSH3|54961|slingshot homolog 3 (Drosophila)##AK001790|SSH3|54961|slingshot homolog 3 (Drosophila)##AK094226|SSH3|54961|slingshot homolog 3 (Drosophila)##BC007709|SSH3|54961|slingshot homolog 3 (Drosophila)##AB072360|SSH3|54961|slingshot homolog 3 (Drosophila)##AB099291|SSH3|54961|slingshot homolog 3 (Drosophila)##DQ891525|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ894715|CLCF1|23529|cardiotrophin-like cytokine factor 1##AY049779|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066229|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066230|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066231|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF172854|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC012939|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF176911|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_013246|CLCF1|23529|cardiotrophin-like cytokine factor 1##AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC014848|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_004584|RAD9A|5883|RAD9 homolog A (S. pombe)##U53174|RAD9A|5883|RAD9 homolog A (S. pombe)##AK315348|RAD9A|5883|RAD9 homolog A (S. pombe)##CR536508|RAD9A|5883|RAD9 homolog A (S. pombe)	0.985726	CTCF.p2:0:0.986
chr5	177573131	177573240	reg1001461.p1	15.609	+	TSC_hg19_v1_chr5_+_177558026 BC009911 DQ494789 NM_022762	-15153	+	TSC_hg19_v1_chr5_+_177558014 AK093481 AK094065 AX748156 AX748436 AK125337	-15174	+	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	-32557	+	CR457238 AF401219 TSC_hg19_v1_chr5_-_177580868 AK000486 BC000009 AF161404 AJ293309 BC006387	7672	-	TSC_hg19_v1_chr5_-_177580916 NM_001034833 NM_017838	7751	-	TSC_hg19_v1_chr5_+_177631530 AK097657 NM_004499 NM_031266	58329	+	BC009911|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##DQ494789|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##NM_022762|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK093481|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK094065|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK125337|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3##CR457238|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AF401219|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AK000486|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##BC000009|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AF161404|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AJ293309|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##BC006387|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##NM_001034833|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##NM_017838|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AK097657|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##NM_004499|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##NM_031266|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	0.999775	CTCF.p2:-1:1.000
chr6	161795010	161795142	reg1002420.p1	15.608	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	-100016	-	AK094629 TSC_hg19_v1_chr6_-_161413451	-381663	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-382218	+	AK057286 NM_001080378 NM_152410 BC044227	1353093	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	1353651	-	TSC_hg19_v1_chr6_-_163148797 AB245403 AK292590 BC022014	1353702	-	AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB245403|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AK292590|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##BC022014|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.68105	CTCF.p2:7:0.681
chr12	121151803	121151941	reg1001860.p1	15.607	+	TSC_hg19_v1_chr12_+_121148260 AK126367 BC070088	-3599	+	NM_001080533	-4042	+	CR936818 TSC_hg19_v1_chr12_+_121132759	-19154	+	NM_000017 TSC_hg19_v1_chr12_+_121163641 BC025963 AK300645 M26393 DQ892184 DQ895378 CU693082 AB527081	11757	+	AK074916 TSC_hg19_v1_chr12_-_121248688	96811	-	AY169313 TSC_hg19_v1_chr12_-_121341927 BC073910 AK291161	190092	-	AK126367|UNC119B|84747|unc-119 homolog B (C. elegans)##BC070088|UNC119B|84747|unc-119 homolog B (C. elegans)##NM_001080533|UNC119B|84747|unc-119 homolog B (C. elegans)##NM_000017|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##BC025963|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AK300645|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##M26393|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##DQ892184|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##DQ895378|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AB527081|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AK074916|SPPL3|121665|signal peptide peptidase-like 3##AY169313|SPPL3|121665|signal peptide peptidase-like 3##BC073910|SPPL3|121665|signal peptide peptidase-like 3##AK291161|SPPL3|121665|signal peptide peptidase-like 3	0.964239	CTCF.p2:17:0.964
chr15	101547278	101547398	reg1001820.p1	15.607	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-87826	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-87864	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-127267	+	AB071402 TSC_hg19_v1_chr15_-_101791795	244398	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	244797	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	270325	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.999447	CTCF.p2:15:0.999
chr12	124521278	124521411	reg1001453.p1	15.604	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-63615	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-64145	-	NM_207437	-274303	+	AK126577 NM_181709	252365	+	TSC_hg19_v1_chr12_-_125002875 BC033087	481515	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	530731	-	AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##NM_207437|DNAH10|196385|dynein, axonemal, heavy chain 10##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2	0.987208	CTCF.p2:-15:0.987
chr11	14271000	14271118	reg1001749.p1	15.603	+	TSC_hg19_v1_chr11_+_13984277 NM_006108 AK291780 AK074803 BC136513 BC136563 BC006262 AB051390	-286776	+	AY423606 BC017377 TSC_hg19_v1_chr11_+_13690267 AY600449	-580792	+	TSC_hg19_v1_chr11_+_13690255 AK315527 AK026381	-580806	+	AK309550 AK309683 NM_001177315 NM_001102669	108992	-	TSC_hg19_v1_chr11_-_14380730 BC013106 AK299606 AK313976 NM_012250	109618	-	AK300103 NM_001177314	114992	-	NM_006108|SPON1|10418|spondin 1, extracellular matrix protein##AK291780|SPON1|10418|spondin 1, extracellular matrix protein##AK074803|SPON1|10418|spondin 1, extracellular matrix protein##BC136513|SPON1|10418|spondin 1, extracellular matrix protein##BC136563|SPON1|10418|spondin 1, extracellular matrix protein##AB051390|SPON1|10418|spondin 1, extracellular matrix protein##AY423606|FAR1|84188|fatty acyl CoA reductase 1##BC017377|FAR1|84188|fatty acyl CoA reductase 1##AY600449|FAR1|84188|fatty acyl CoA reductase 1##AK315527|FAR1|84188|fatty acyl CoA reductase 1##AK026381|FAR1|84188|fatty acyl CoA reductase 1##AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##BC013106|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK299606|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK313976|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_012250|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	0.997989	CTCF.p2:21:0.998
chr1	117027993	117028107	reg1001383.p2	15.599	+	TSC_hg19_v1_chr1_-_116961216 AK309389	-66812	-	TSC_hg19_v1_chr1_-_116961205 BC007373 BC018892 BC028281 BC069003 AK309872 BC098428	-66860	-	AK296362 NM_001160234	-102059	+	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	85565	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	85627	-	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	182333	-	AK309389|ATP1A1OS|84852|ATP1A1 opposite strand##BC007373|ATP1A1OS|84852|ATP1A1 opposite strand##BC018892|ATP1A1OS|84852|ATP1A1 opposite strand##BC028281|ATP1A1OS|84852|ATP1A1 opposite strand##BC069003|ATP1A1OS|84852|ATP1A1 opposite strand##AK309872|ATP1A1OS|84852|ATP1A1 opposite strand##BC098428|ATP1A1OS|84852|ATP1A1 opposite strand##AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3	0.999894	CTCF.p2:6:1.000
chr12	111264567	111264704	reg1001989.p1	15.598	+	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	-83879	-	TSC_hg19_v1_chr12_-_111180641 X74008 BC014073	-83979	-	L07395 AK297882 AB590512 EU831993 EU832086 TSC_hg19_v1_chr12_-_111180593	-84089	-	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	20168	+	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	93743	-	BC151245 NM_015267 AB006631 AF271236	207237	+	NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##X74008|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC014073|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##L07395|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK297882|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU831993|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU832086|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2	0.887567	CTCF.p2:28:0.888
chr7	42980980	42981118	reg1002282.p1	15.597	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-9080	+	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	-9248	-	BC002900 AB528708 CR450317 CU690460 D00760 BC047697 TSC_hg19_v1_chr7_-_42971774 AK311369 BX641097 AK222976	-9296	-	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	171177	+	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	641645	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	788045	-	AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC002900|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##CR450317|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##D00760|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC047697|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BX641097|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK222976|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44	0.996965	CTCF.p2:-7:0.997
chr9	129703022	129703153	reg1002234.p1	15.593	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	-25983	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	-80143	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	-135777	+	AF221098 NM_001190728 AB385313 CU689706	21448	+	AK075026 TSC_hg19_v1_chr9_-_129870392	167265	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	181821	-	AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AF221098|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190728|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK075026|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2	0.999081	CTCF.p2:-20:0.999
chr11	128826459	128826606	reg1002508.p1	15.592	+	NM_001195195 NM_001251964 NM_022112	-13239	-	AB527772 AY302135 NM_001195194 BC069399 BC069426	-18782	-	AK125634 TSC_hg19_v1_chr11_-_128776110	-50418	-	AB018255 AY194287 TSC_hg19_v1_chr11_-_128894084 AB079856 NM_014715	67529	-	EF127492 NM_001142685	235560	-	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	419349	+	NM_001195195|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001251964|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_022112|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##AY302135|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001195194|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##BC069399|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##BC069426|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##AK125634|C11orf45|219833|chromosome 11 open reading frame 45##AB018255|ARHGAP32|9743|Rho GTPase activating protein 32##AY194287|ARHGAP32|9743|Rho GTPase activating protein 32##AB079856|ARHGAP32|9743|Rho GTPase activating protein 32##NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32##EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2	0.990533	CTCF.p2:6:0.991
chr9	130632291	130632414	reg1001962.p1	15.591	+	TSC_hg19_v1_chr9_-_130617036 NM_000118 NM_001114753	-15325	-	TSC_hg19_v1_chr9_-_130616968 AK222669 AK302455	-15377	-	TSC_hg19_v1_chr9_-_130616938 BC014271 BC020391 X72012 AK290389 AK300156	-15496	-	BC001116 BC036803 AK313758 TSC_hg19_v1_chr9_-_130639955 BC100022 NM_000476	7628	-	AK300534 TSC_hg19_v1_chr9_-_130659688 AK057100	27276	-	TSC_hg19_v1_chr9_-_130661803 AK226174	29447	-	NM_000118|ENG|2022|endoglin##NM_001114753|ENG|2022|endoglin##AK222669|ENG|2022|endoglin##AK302455|ENG|2022|endoglin##BC014271|ENG|2022|endoglin##BC020391|ENG|2022|endoglin##X72012|ENG|2022|endoglin##AK290389|ENG|2022|endoglin##AK300156|ENG|2022|endoglin##BC001116|AK1|203|adenylate kinase 1##BC036803|AK1|203|adenylate kinase 1##AK313758|AK1|203|adenylate kinase 1##BC100022|AK1|203|adenylate kinase 1##NM_000476|AK1|203|adenylate kinase 1##AK300534|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK057100|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK226174|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	1.019093	CTCF.p2:8:0.999
chr1	23031067	23031195	reg1002507.p1	15.589	+	NM_000491 TSC_hg19_v1_chr1_+_22979728 BC008983	-51408	+	NM_001114101 NM_172369 AK057792 TSC_hg19_v1_chr1_+_22970125 AF087892 AK226152 BC009016 AK130613	-60944	+	TSC_hg19_v1_chr1_+_22963170 NM_015991 BC030153 AK311980 BC071986	-67992	+	TSC_hg19_v1_chr1_+_23037331 NM_004442 NM_017449 AK299701 BC067861 AB210018 AF025304 CU686595 L36643	6292	+	NM_001242521	311211	-	TSC_hg19_v1_chr1_+_23345960 NM_001009999 NM_015013	314824	+	NM_000491|C1QB|713|complement component 1, q subcomponent, B chain##BC008983|C1QB|713|complement component 1, q subcomponent, B chain##NM_001114101|C1QC|714|complement component 1, q subcomponent, C chain##NM_172369|C1QC|714|complement component 1, q subcomponent, C chain##AK057792|C1QC|714|complement component 1, q subcomponent, C chain##AF087892|C1QC|714|complement component 1, q subcomponent, C chain##AK226152|C1QC|714|complement component 1, q subcomponent, C chain##BC009016|C1QC|714|complement component 1, q subcomponent, C chain##AK130613|C1QC|714|complement component 1, q subcomponent, C chain##NM_015991|C1QA|712|complement component 1, q subcomponent, A chain##BC030153|C1QA|712|complement component 1, q subcomponent, A chain##AK311980|C1QA|712|complement component 1, q subcomponent, A chain##BC071986|C1QA|712|complement component 1, q subcomponent, A chain##NM_004442|EPHB2|2048|EPH receptor B2##NM_017449|EPHB2|2048|EPH receptor B2##AK299701|EPHB2|2048|EPH receptor B2##BC067861|EPHB2|2048|EPH receptor B2##AB210018|EPHB2|2048|EPH receptor B2##AF025304|EPHB2|2048|EPH receptor B2##L36643|EPHB2|2048|EPH receptor B2##NM_001242521|LOC729059|729059|uncharacterized LOC729059##NM_001009999|KDM1A|23028|lysine (K)-specific demethylase 1A##NM_015013|KDM1A|23028|lysine (K)-specific demethylase 1A	0.999308	CTCF.p2:-7:0.999
chr1	181394153	181394295	reg1001397.p1	15.588	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-336359	+	NM_016545	-336587	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-391074	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	58476	+	BC137223 BC137224 AK128654 NM_001009992	636573	-	TSC_hg19_v1_chr1_-_182354649 AK301600	960458	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	1.343482	CTCF.p2:33:0.973	CTCF.p2:-37:0.370
chr8	144212560	144212679	reg1002602.p1	15.586	+	TSC_hg19_v1_chr8_+_144120683 BC073830 AK094450 NM_173687 BC120993 BC063497	-91944	+	TSC_hg19_v1_chr8_+_144102304 BC119708 BC119709 AB529045 U56145	-110292	+	TSC_hg19_v1_chr8_+_144099945 NM_001127213 NM_002346 AK223074 AK129615 AK311983 BC003392 U42376 Z68179	-112677	+	NM_002347	28837	-	BC030192 AB012293 TSC_hg19_v1_chr8_-_144241700	29070	-	BC053355 TSC_hg19_v1_chr8_-_144241739 BC028894 NM_001135655	29120	-	BC073830|C8orf31|286122|chromosome 8 open reading frame 31##AK094450|C8orf31|286122|chromosome 8 open reading frame 31##NM_173687|C8orf31|286122|chromosome 8 open reading frame 31##BC120993|C8orf31|286122|chromosome 8 open reading frame 31##BC063497|C8orf31|286122|chromosome 8 open reading frame 31##BC119708|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119709|LY6E|4061|lymphocyte antigen 6 complex, locus E##U56145|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_001127213|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002346|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK223074|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK129615|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK311983|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC003392|LY6E|4061|lymphocyte antigen 6 complex, locus E##U42376|LY6E|4061|lymphocyte antigen 6 complex, locus E##Z68179|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002347|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H##AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC053355|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC028894|LY6H|4062|lymphocyte antigen 6 complex, locus H##NM_001135655|LY6H|4062|lymphocyte antigen 6 complex, locus H	0.914726	CTCF.p2:0:0.915
chr16	10275525	10275648	reg1001304.p4	15.584	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-1089983	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-1090046	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-1218291	-	BC143273 U09002 NM_001134408	247	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	602	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	1091	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.930171	CTCF.p2:6:0.930
chr19	665006	665124	reg1001791.p1	15.584	+	TSC_hg19_v1_chr19_+_663381 AK096031	-1634	+	TSC_hg19_v1_chr19_-_663219 AK289616 NM_194460	-1823	-	TSC_hg19_v1_chr19_-_663205 BC001442	-1861	-	TSC_hg19_v1_chr19_+_676391 NM_005860 AK291958 AK313341 BC005839 AY358917 BC033119 U76702	11319	+	BC137161 BC144505 NM_214710	30395	-	TSC_hg19_v1_chr19_+_708934 NM_001040134 NM_002579 AK299809 AK315168 BC032449 Y14770	43884	+	AK289616|RNF126|55658|ring finger protein 126##NM_194460|RNF126|55658|ring finger protein 126##BC001442|RNF126|55658|ring finger protein 126##NM_005860|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##AK291958|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##AK313341|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##BC005839|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##AY358917|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##BC033119|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##U76702|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##BC137161|PRSS57|400668|protease, serine, 57##BC144505|PRSS57|400668|protease, serine, 57##NM_214710|PRSS57|400668|protease, serine, 57##NM_001040134|PALM|5064|paralemmin##NM_002579|PALM|5064|paralemmin##AK315168|PALM|5064|paralemmin##BC032449|PALM|5064|paralemmin##Y14770|PALM|5064|paralemmin	0.646429	CTCF.p2:-19:0.646
chr17	48164935	48165033	reg1001274.p1	15.583	+	TSC_hg19_v1_chr17_+_48133357 AB209658 BC150190 BC015344	-31538	+	AK293323 AK303384 NM_002204 NM_005501 TSC_hg19_v1_chr17_+_48133350	-31643	+	BC012361 BC028970 AK075167 TSC_hg19_v1_chr17_-_48072589 AK313257 NM_005220	-92406	-	AK055119 NM_001199898	7116	+	TSC_hg19_v1_chr17_+_48172739 NM_001199900 NM_002611 AK297089 BC040478 BC063137 AK290522 AK293600 BC005811 L42451 NM_001199899	7826	+	TSC_hg19_v1_chr17_-_48207145 BC142728 BC136485 AY148482 NM_174920 AK291482 AK094209 AK225767 BC141822	42165	-	AB209658|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC150190|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC015344|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AK293323|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AK303384|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##NM_002204|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##NM_005501|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC012361|DLX3|1747|distal-less homeobox 3##BC028970|DLX3|1747|distal-less homeobox 3##AK075167|DLX3|1747|distal-less homeobox 3##AK313257|DLX3|1747|distal-less homeobox 3##NM_005220|DLX3|1747|distal-less homeobox 3##AK055119|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199898|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199900|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_002611|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK297089|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC040478|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC063137|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK290522|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK293600|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC005811|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##L42451|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199899|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC142728|SAMD14|201191|sterile alpha motif domain containing 14##BC136485|SAMD14|201191|sterile alpha motif domain containing 14##AY148482|SAMD14|201191|sterile alpha motif domain containing 14##NM_174920|SAMD14|201191|sterile alpha motif domain containing 14##AK291482|SAMD14|201191|sterile alpha motif domain containing 14##AK094209|SAMD14|201191|sterile alpha motif domain containing 14##AK225767|SAMD14|201191|sterile alpha motif domain containing 14##BC141822|SAMD14|201191|sterile alpha motif domain containing 14	0.999343	CTCF.p2:15:0.999
chr2	203453482	203453620	reg1002139.p1	15.583	+	TSC_hg19_v1_chr2_+_203241049 NM_001204	-212505	+	TSC_hg19_v1_chr2_+_203130493 BC018805 BC009306 BC032592 NM_015934 DQ890868 EU176490 AB528451 CU689436 AF123534 AF263608	-322979	+	TSC_hg19_v1_chr2_+_203130458 AK300844 AK307396 AL117554 BC001707	-323095	+	TSC_hg19_v1_chr2_+_203499703 AK096090	46138	+	TSC_hg19_v1_chr2_+_203499820 NM_173511	46308	+	AB053315 TSC_hg19_v1_chr2_+_203500263	46686	+	NM_001204|BMPR2|659|bone morphogenetic protein receptor, type II (serine/threonine kinase)##BC018805|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC009306|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC032592|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##NM_015934|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##DQ890868|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##EU176490|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AF123534|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AF263608|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK300844|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK307396|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AL117554|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC001707|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK096090|FAM117B|150864|family with sequence similarity 117, member B##NM_173511|FAM117B|150864|family with sequence similarity 117, member B##AB053315|FAM117B|150864|family with sequence similarity 117, member B	0.710303	CTCF.p2:-8:0.710
chr12	56131081	56131219	reg1002342.p1	15.580	+	TSC_hg19_v1_chr12_-_56122865 NM_001040034 NM_001780	-8276	-	TSC_hg19_v1_chr12_-_56122819 BC002349	-8338	-	AK311893 TSC_hg19_v1_chr12_-_56122794	-8357	-	NM_005811 AF100907 AF028333	5972	+	AB463939 AF486281 TSC_hg19_v1_chr12_-_56211499	80342	-	TSC_hg19_v1_chr12_-_56211507 AF161434 BC007099 BC093051 AK222719 AK290508	80356	-	NM_001040034|CD63|967|CD63 molecule##NM_001780|CD63|967|CD63 molecule##BC002349|CD63|967|CD63 molecule##AK311893|CD63|967|CD63 molecule##NM_005811|GDF11|10220|growth differentiation factor 11##AF100907|GDF11|10220|growth differentiation factor 11##AF028333|GDF11|10220|growth differentiation factor 11##AF486281|SARNP|84324|SAP domain containing ribonucleoprotein##AF161434|SARNP|84324|SAP domain containing ribonucleoprotein##BC007099|SARNP|84324|SAP domain containing ribonucleoprotein##BC093051|SARNP|84324|SAP domain containing ribonucleoprotein##AK222719|SARNP|84324|SAP domain containing ribonucleoprotein##AK290508|SARNP|84324|SAP domain containing ribonucleoprotein	0.98951	CTCF.p2:13:0.990
chr4	15731680	15731814	reg1002394.p1	15.577	+	TSC_hg19_v1_chr4_+_15704753 AB175627 AB590680 BT019502	-26988	+	TSC_hg19_v1_chr4_+_15704695 AK312497 BC012095	-27052	+	NM_004334 D21878 TSC_hg19_v1_chr4_+_15704687	-27118	+	TSC_hg19_v1_chr4_+_15779950 AK303169 NM_001775 D84276 AK313268 M34461 BC007964 D84277 DQ893184 EU176777 AK297592	48224	+	BC003628 M60047 BC008910 BC018852 AK291307 TSC_hg19_v1_chr4_-_15939972	208213	-	NM_005130	208615	-	AB175627|BST1|683|bone marrow stromal cell antigen 1##BT019502|BST1|683|bone marrow stromal cell antigen 1##AK312497|BST1|683|bone marrow stromal cell antigen 1##BC012095|BST1|683|bone marrow stromal cell antigen 1##NM_004334|BST1|683|bone marrow stromal cell antigen 1##D21878|BST1|683|bone marrow stromal cell antigen 1##AK303169|CD38|952|CD38 molecule##NM_001775|CD38|952|CD38 molecule##D84276|CD38|952|CD38 molecule##AK313268|CD38|952|CD38 molecule##M34461|CD38|952|CD38 molecule##BC007964|CD38|952|CD38 molecule##D84277|CD38|952|CD38 molecule##DQ893184|CD38|952|CD38 molecule##EU176777|CD38|952|CD38 molecule##AK297592|CD38|952|CD38 molecule##BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1##M60047|FGFBP1|9982|fibroblast growth factor binding protein 1##BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1##BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1##AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1##NM_005130|FGFBP1|9982|fibroblast growth factor binding protein 1	0.509681	CTCF.p2:-13:0.510
chr12	31835199	31835320	reg1001341.p1	15.576	+	NM_001135863 TSC_hg19_v1_chr12_+_31812621 AL832339 BC039107	-22645	+	BC039535 NM_173802	-23139	+	AK290248 NM_001135864	-35166	+	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	46715	-	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	46797	-	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	109945	-	NM_001135863|METTL20|254013|methyltransferase like 20##AL832339|METTL20|254013|methyltransferase like 20##BC039107|METTL20|254013|methyltransferase like 20##BC039535|METTL20|254013|methyltransferase like 20##NM_173802|METTL20|254013|methyltransferase like 20##AK290248|METTL20|254013|methyltransferase like 20##NM_001135864|METTL20|254013|methyltransferase like 20##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C	0.999449	CTCF.p2:-17:0.999
chr9	130683957	130684067	reg1001134.p2	15.576	+	BC036705 TSC_hg19_v1_chr9_-_130679297 AK292049 AK000600 NM_175039 NM_175040	-4752	-	TSC_hg19_v1_chr9_-_130667604 AY358672 AK124217 AK310850	-16397	-	TSC_hg19_v1_chr9_-_130661892 BC036102	-22102	-	TSC_hg19_v1_chr9_-_130689700 BC042184 NM_173492	5721	-	NM_001135219	9063	-	TSC_hg19_v1_chr9_-_130700118 BC015374	16095	-	BC036705|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AK292049|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AK000600|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##NM_175039|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##NM_175040|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AY358672|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK124217|LOC100131355|100131355|uncharacterized LOC100131355##AK310850|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC036102|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC042184|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##NM_173492|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##NM_001135219|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##BC015374|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit	0.987971	CTCF.p2:7:0.988
chr10	71267727	71267828	reg1001272.p1	15.572	+	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	-56444	+	TSC_hg19_v1_chr10_+_71211220 NM_012339 BC003157 BC004161 AF120266	-56516	+	AK300649 BC033742 AK291996 NM_001057	-91157	-	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	65323	-	NM_145306 BC013587	122230	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	293880	+	NM_012339|TSPAN15|23555|tetraspanin 15##BC003157|TSPAN15|23555|tetraspanin 15##BC004161|TSPAN15|23555|tetraspanin 15##AF120266|TSPAN15|23555|tetraspanin 15##AK300649|TACR2|6865|tachykinin receptor 2##BC033742|TACR2|6865|tachykinin receptor 2##AK291996|TACR2|6865|tachykinin receptor 2##NM_001057|TACR2|6865|tachykinin receptor 2##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3##NM_145306|C10orf35|219738|chromosome 10 open reading frame 35##BC013587|C10orf35|219738|chromosome 10 open reading frame 35##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1	0.734629	CTCF.p2:20:0.735
chr14	75774632	75774757	reg1001292.p3	15.571	+	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	-29112	+	TSC_hg19_v1_chr14_-_75643341 NM_006827	-131342	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	-131361	-	NM_001135047 TSC_hg19_v1_chr14_+_75894724	119947	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	120319	+	BC051303 NM_001135049	124142	+	NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##NM_006827|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2	0.989619	CTCF.p2:-12:0.990
chr20	30539901	30540033	reg1002170.p1	15.570	+	TSC_hg19_v1_chr20_-_30539856 NM_030815 AY286301	-96	-	TSC_hg19_v1_chr20_-_30539818 BC009334 AK312021	-141	-	TSC_hg19_v1_chr20_-_30539781 BC001856 AB528566	-207	-	AY534245 NM_001011718 TSC_hg19_v1_chr20_+_30555960	15922	+	NM_080625 AK057090 BC030254	58281	+	TSC_hg19_v1_chr20_+_30640055 NM_001172129 NM_001172130 NM_001172131 NM_001172132 NM_001172133 NM_002110 AK289896 AK225819 AK290928 AK298726 AK026432 BC108930 BC108931 BC113854 BC114463 AK314335 BC073748 BC094847 BC014435	100079	+	NM_030815|PDRG1|81572|p53 and DNA-damage regulated 1##AY286301|PDRG1|81572|p53 and DNA-damage regulated 1##BC009334|PDRG1|81572|p53 and DNA-damage regulated 1##AK312021|PDRG1|81572|p53 and DNA-damage regulated 1##BC001856|PDRG1|81572|p53 and DNA-damage regulated 1##AY534245|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_001011718|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_080625|C20orf160|140706|chromosome 20 open reading frame 160##AK057090|C20orf160|140706|chromosome 20 open reading frame 160##BC030254|C20orf160|140706|chromosome 20 open reading frame 160##NM_001172129|HCK|3055|hemopoietic cell kinase##NM_001172130|HCK|3055|hemopoietic cell kinase##NM_001172131|HCK|3055|hemopoietic cell kinase##NM_001172132|HCK|3055|hemopoietic cell kinase##NM_001172133|HCK|3055|hemopoietic cell kinase##NM_002110|HCK|3055|hemopoietic cell kinase##AK289896|HCK|3055|hemopoietic cell kinase##AK225819|HCK|3055|hemopoietic cell kinase##AK290928|HCK|3055|hemopoietic cell kinase##AK298726|HCK|3055|hemopoietic cell kinase##AK026432|HCK|3055|hemopoietic cell kinase##BC108930|HCK|3055|hemopoietic cell kinase##BC108931|HCK|3055|hemopoietic cell kinase##BC113854|HCK|3055|hemopoietic cell kinase##BC114463|HCK|3055|hemopoietic cell kinase##AK314335|HCK|3055|hemopoietic cell kinase##BC073748|HCK|3055|hemopoietic cell kinase##BC094847|HCK|3055|hemopoietic cell kinase##BC014435|HCK|3055|hemopoietic cell kinase	0.983915	CTCF.p2:-2:0.984
chrX	12912327	12912447	reg1002053.p1	15.570	+	AK313858 BC033651 NM_016562 AF240467 AF245702	-27189	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	-102819	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	-102890	+	AK314240 NM_138636 AF246971 AY358296 BC101074 BC101075 BC101076 BC101077 AF245703	12370	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	80853	+	TSC_hg19_v1_chrX_+_12994293 BC104464 BC104465 BT007090 X02493	81956	+	AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK314240|TLR8|51311|toll-like receptor 8##NM_138636|TLR8|51311|toll-like receptor 8##AF246971|TLR8|51311|toll-like receptor 8##AY358296|TLR8|51311|toll-like receptor 8##BC101074|TLR8|51311|toll-like receptor 8##BC101075|TLR8|51311|toll-like receptor 8##BC101076|TLR8|51311|toll-like receptor 8##BC101077|TLR8|51311|toll-like receptor 8##AF245703|TLR8|51311|toll-like receptor 8##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked##BC104464|TMSB4X|7114|thymosin beta 4, X-linked##BC104465|TMSB4X|7114|thymosin beta 4, X-linked##BT007090|TMSB4X|7114|thymosin beta 4, X-linked##X02493|TMSB4X|7114|thymosin beta 4, X-linked	0.797577	CTCF.p2:2:0.798
chrX	14113910	14114050	reg1002527.p1	15.569	+	BC003607 AK000521 BC014324 BC020785 NM_001042479 NM_001042480 NM_017856	-65984	-	TSC_hg19_v1_chrX_-_13956758 AB209525 U45955 NM_001001994	-157152	-	TSC_hg19_v1_chrX_-_13956533 AK294314	-157449	-	AK312591 NM_001118885 NM_001118886 NM_001171942 NM_002063 AK297304	433470	+	TSC_hg19_v1_chrX_-_14891182 BC136558 BC136560 BC043596 BC055411 NM_001018113 NM_152633 AK091383 AX746948	777195	-	NM_152581 TSC_hg19_v1_chrX_+_14891582 BC030641 AL832230 AK315781	777576	+	BC003607|GEMIN8|54960|gem (nuclear organelle) associated protein 8##AK000521|GEMIN8|54960|gem (nuclear organelle) associated protein 8##BC014324|GEMIN8|54960|gem (nuclear organelle) associated protein 8##BC020785|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_001042479|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_001042480|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_017856|GEMIN8|54960|gem (nuclear organelle) associated protein 8##AB209525|GPM6B|2824|glycoprotein M6B##U45955|GPM6B|2824|glycoprotein M6B##NM_001001994|GPM6B|2824|glycoprotein M6B##AK294314|GPM6B|2824|glycoprotein M6B##AK312591|GLRA2|2742|glycine receptor, alpha 2##NM_001118885|GLRA2|2742|glycine receptor, alpha 2##NM_001118886|GLRA2|2742|glycine receptor, alpha 2##NM_001171942|GLRA2|2742|glycine receptor, alpha 2##NM_002063|GLRA2|2742|glycine receptor, alpha 2##AK297304|GLRA2|2742|glycine receptor, alpha 2##BC136558|FANCB|2187|Fanconi anemia, complementation group B##BC136560|FANCB|2187|Fanconi anemia, complementation group B##BC043596|FANCB|2187|Fanconi anemia, complementation group B##BC055411|FANCB|2187|Fanconi anemia, complementation group B##NM_001018113|FANCB|2187|Fanconi anemia, complementation group B##NM_152633|FANCB|2187|Fanconi anemia, complementation group B##AK091383|FANCB|2187|Fanconi anemia, complementation group B##NM_152581|MOSPD2|158747|motile sperm domain containing 2##BC030641|MOSPD2|158747|motile sperm domain containing 2##AL832230|MOSPD2|158747|motile sperm domain containing 2##AK315781|MOSPD2|158747|motile sperm domain containing 2	0.012597	
chr17	47938600	47938723	reg1002141.p1	15.567	+	AF515828 AF515829 AF515830 AF515831 AF521560 AY471574 BC100840 BC100841 BC100842 BC100843 BC111857 BC111858 NM_001077503 NM_001077504 NM_001077505 NM_001077506 NM_170685	-13283	-	AK127421 NM_001242791	-15390	+	TSC_hg19_v1_chr17_+_47866119 AF074606 AB463912 CU689460 DQ890883 DQ894037	-72503	+	BC016145 NM_138281 AF254115	107901	+	U31762 TSC_hg19_v1_chr17_+_48049688	111022	+	NM_001934 U73328	111468	+	AF515828|TAC4|255061|tachykinin 4 (hemokinin)##AF515829|TAC4|255061|tachykinin 4 (hemokinin)##AF515830|TAC4|255061|tachykinin 4 (hemokinin)##AF515831|TAC4|255061|tachykinin 4 (hemokinin)##AF521560|TAC4|255061|tachykinin 4 (hemokinin)##AY471574|TAC4|255061|tachykinin 4 (hemokinin)##BC100840|TAC4|255061|tachykinin 4 (hemokinin)##BC100841|TAC4|255061|tachykinin 4 (hemokinin)##BC100842|TAC4|255061|tachykinin 4 (hemokinin)##BC100843|TAC4|255061|tachykinin 4 (hemokinin)##BC111857|TAC4|255061|tachykinin 4 (hemokinin)##BC111858|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077503|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077504|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077505|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077506|TAC4|255061|tachykinin 4 (hemokinin)##NM_170685|TAC4|255061|tachykinin 4 (hemokinin)##AK127421|FLJ45513|729220|uncharacterized LOC729220##NM_001242791|FLJ45513|729220|uncharacterized LOC729220##AF074606|KAT7|11143|K(lysine) acetyltransferase 7##DQ890883|KAT7|11143|K(lysine) acetyltransferase 7##DQ894037|KAT7|11143|K(lysine) acetyltransferase 7##BC016145|DLX4|1748|distal-less homeobox 4##NM_138281|DLX4|1748|distal-less homeobox 4##AF254115|DLX4|1748|distal-less homeobox 4##U31762|DLX4|1748|distal-less homeobox 4##NM_001934|DLX4|1748|distal-less homeobox 4##U73328|DLX4|1748|distal-less homeobox 4	0.999898	CTCF.p2:-5:1.000
chr17	78169994	78170142	reg1002389.p1	15.567	+	BC001326 NM_052819	-8470	+	AF322642 NM_024110 BC018142	-17780	+	CR456750 CU678566 AB383751 X79538 BC003662 BC004386 BC011151 TSC_hg19_v1_chr17_-_78120947 AK290608 NM_014740	-49198	-	TSC_hg19_v1_chr17_-_78194133 CU690396 U30894 AB209900 BC047318 AK222890 AK291257 AK304706 AK309927 AK095969 NM_000199	24073	-	TSC_hg19_v1_chr17_+_78194101 NM_001166347 NM_001166348 NM_001166349 NM_173626 AJ544073 AK027293 AK075248 AK315132 AL833468 BC035900 AF345195	24110	+	TSC_hg19_v1_chr17_+_78234657 AB537889 BC036891 NM_020914 NM_020954 AL832920 BC040341 AF397204 AF397205	64617	+	BC001326|CARD14|79092|caspase recruitment domain family, member 14##NM_052819|CARD14|79092|caspase recruitment domain family, member 14##AF322642|CARD14|79092|caspase recruitment domain family, member 14##NM_024110|CARD14|79092|caspase recruitment domain family, member 14##BC018142|CARD14|79092|caspase recruitment domain family, member 14##CR456750|EIF4A3|9775|eukaryotic translation initiation factor 4A3##X79538|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC003662|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC004386|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC011151|EIF4A3|9775|eukaryotic translation initiation factor 4A3##AK290608|EIF4A3|9775|eukaryotic translation initiation factor 4A3##NM_014740|EIF4A3|9775|eukaryotic translation initiation factor 4A3##U30894|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AB209900|SGSH|6448|N-sulfoglucosamine sulfohydrolase##BC047318|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK222890|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK291257|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK304706|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK309927|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK095969|SGSH|6448|N-sulfoglucosamine sulfohydrolase##NM_000199|SGSH|6448|N-sulfoglucosamine sulfohydrolase##NM_001166347|SLC26A11|284129|solute carrier family 26, member 11##NM_001166348|SLC26A11|284129|solute carrier family 26, member 11##NM_001166349|SLC26A11|284129|solute carrier family 26, member 11##NM_173626|SLC26A11|284129|solute carrier family 26, member 11##AJ544073|SLC26A11|284129|solute carrier family 26, member 11##AK027293|SLC26A11|284129|solute carrier family 26, member 11##AK075248|SLC26A11|284129|solute carrier family 26, member 11##AK315132|SLC26A11|284129|solute carrier family 26, member 11##AL833468|SLC26A11|284129|solute carrier family 26, member 11##BC035900|SLC26A11|284129|solute carrier family 26, member 11##AF345195|SLC26A11|284129|solute carrier family 26, member 11##AB537889|RNF213|57674|ring finger protein 213##BC036891|RNF213|57674|ring finger protein 213##NM_020914|RNF213|57674|ring finger protein 213##NM_020954|RNF213|57674|ring finger protein 213##AL832920|RNF213|57674|ring finger protein 213##BC040341|RNF213|57674|ring finger protein 213##AF397204|RNF213|57674|ring finger protein 213##AF397205|RNF213|57674|ring finger protein 213	0.999872	CTCF.p2:1:1.000
chr1	33238729	33238845	reg1001363.p2	15.566	+	TSC_hg19_v1_chr1_+_33231274 AB040955	-7516	+	TSC_hg19_v1_chr1_+_33231234 AK298965 NM_001198972 NM_001198973	-7556	+	TSC_hg19_v1_chr1_+_33219620 AB384615	-19172	+	U40714 U89436 DQ891666 DQ894853 TSC_hg19_v1_chr1_-_33282932 BC001933 BC004151 BC016689 AK026535 AK223608	44132	-	AK090711 AX746586 TSC_hg19_v1_chr1_+_33283180 BX647916 NM_001017406 NM_022753 BX647667	44330	+	TSC_hg19_v1_chr1_+_33283215 BC015175	44525	+	AB040955|KIAA1522|57648|KIAA1522##AK298965|KIAA1522|57648|KIAA1522##NM_001198972|KIAA1522|57648|KIAA1522##NM_001198973|KIAA1522|57648|KIAA1522##U40714|YARS|8565|tyrosyl-tRNA synthetase##U89436|YARS|8565|tyrosyl-tRNA synthetase##DQ891666|YARS|8565|tyrosyl-tRNA synthetase##DQ894853|YARS|8565|tyrosyl-tRNA synthetase##BC001933|YARS|8565|tyrosyl-tRNA synthetase##BC004151|YARS|8565|tyrosyl-tRNA synthetase##BC016689|YARS|8565|tyrosyl-tRNA synthetase##AK026535|YARS|8565|tyrosyl-tRNA synthetase##AK223608|YARS|8565|tyrosyl-tRNA synthetase##AK090711|S100PBP|64766|S100P binding protein##BX647916|S100PBP|64766|S100P binding protein##NM_001017406|S100PBP|64766|S100P binding protein##NM_022753|S100PBP|64766|S100P binding protein##BX647667|S100PBP|64766|S100P binding protein##BC015175|S100PBP|64766|S100P binding protein	0.998131	CTCF.p2:-4:0.998
chr2	85493712	85493834	reg1002286.p1	15.566	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	-133114	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	-295282	+	TSC_hg19_v1_chr2_+_85198299 NM_020122	-295489	+	TSC_hg19_v1_chr2_-_85555100 CU678967 EU176441 EU176775 X94333 BC028219	61299	-	AK223063 TSC_hg19_v1_chr2_-_85555113 AK126465 AK222829 BX640733 AK312479 BC008461 AF027515 AF027516 U62390	61357	-	TSC_hg19_v1_chr2_-_85555373 BX640868 NM_001206840 NM_001206841 NM_001206844 NM_006464	61615	-	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##EU176441|TGOLN2|10618|trans-golgi network protein 2##EU176775|TGOLN2|10618|trans-golgi network protein 2##X94333|TGOLN2|10618|trans-golgi network protein 2##BC028219|TGOLN2|10618|trans-golgi network protein 2##AK223063|TGOLN2|10618|trans-golgi network protein 2##AK126465|TGOLN2|10618|trans-golgi network protein 2##AK222829|TGOLN2|10618|trans-golgi network protein 2##BX640733|TGOLN2|10618|trans-golgi network protein 2##AK312479|TGOLN2|10618|trans-golgi network protein 2##BC008461|TGOLN2|10618|trans-golgi network protein 2##AF027515|TGOLN2|10618|trans-golgi network protein 2##AF027516|TGOLN2|10618|trans-golgi network protein 2##U62390|TGOLN2|10618|trans-golgi network protein 2##BX640868|TGOLN2|10618|trans-golgi network protein 2##NM_001206840|TGOLN2|10618|trans-golgi network protein 2##NM_001206841|TGOLN2|10618|trans-golgi network protein 2##NM_001206844|TGOLN2|10618|trans-golgi network protein 2##NM_006464|TGOLN2|10618|trans-golgi network protein 2	0.998833	CTCF.p2:5:0.999
chr15	52432157	52432283	reg1002446.p1	15.565	+	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	-27274	-	TSC_hg19_v1_chr15_+_52311442 BC035492	-120759	+	TSC_hg19_v1_chr15_+_52311432 CR749401	-120786	+	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	39921	-	TSC_hg19_v1_chr15_+_52472257 AF007131	40115	+	NM_016194	51344	-	AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC035492|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973##NM_016194|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5	0.995178	CTCF.p2:3:0.995
chr18	48346400	48346510	reg1001364.p1	15.564	+	AB042647 AK054702 AK295666 NM_001127175 NM_001127176 NM_031939	-90	-	TSC_hg19_v1_chr18_+_48086463 BC050299 NM_002747 AK293818 BC040493 AK295058	-259958	+	TSC_hg19_v1_chr18_+_47901415 NM_001039535 NM_145060 BC015706 AK313968 AK303464	-445058	+	BC029860 NM_001127174	5287	-	TSC_hg19_v1_chr18_+_48405434 NM_001168335 NM_002396	58979	+	TSC_hg19_v1_chr18_+_48405496 BC000147 AK313391 M55905	59088	+	AB042647|MRO|83876|maestro##AK054702|MRO|83876|maestro##AK295666|MRO|83876|maestro##NM_001127175|MRO|83876|maestro##NM_001127176|MRO|83876|maestro##NM_031939|MRO|83876|maestro##BC050299|MAPK4|5596|mitogen-activated protein kinase 4##NM_002747|MAPK4|5596|mitogen-activated protein kinase 4##AK293818|MAPK4|5596|mitogen-activated protein kinase 4##BC040493|MAPK4|5596|mitogen-activated protein kinase 4##AK295058|MAPK4|5596|mitogen-activated protein kinase 4##NM_001039535|SKA1|220134|spindle and kinetochore associated complex subunit 1##NM_145060|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC015706|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK313968|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK303464|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC029860|MRO|83876|maestro##NM_001127174|MRO|83876|maestro##NM_001168335|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##NM_002396|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##BC000147|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##AK313391|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##M55905|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial	0.967052	CTCF.p2:-4:0.967
chr21	43584647	43584758	reg1001098.p1	15.564	+	AB096965 AY771619 AY771620 NM_001004416 NM_173568	-93277	+	AB051810 AB051811 NM_001199527 NM_001199528	-101635	+	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	-154231	-	AF323660 NM_207627 AF323661 NM_207628	35157	+	AF323662 NM_207629	51484	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	54591	+	AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323662|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207629|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	0.945526	CTCF.p2:-5:0.946
chr3	53409185	53409288	reg1000994.p1	15.564	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	-27643	-	TSC_hg19_v1_chr3_-_53290099 NM_001064 NM_001135055	-119122	-	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	-119225	-	TSC_hg19_v1_chr3_+_53528709 M76558	119423	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	119875	+	TSC_hg19_v1_chr3_-_53880427 NM_018397	471183	-	DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_001064|TKT|7086|transketolase##NM_001135055|TKT|7086|transketolase##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_018397|CHDH|55349|choline dehydrogenase	0.111324	
chr3	64016468	64016598	reg1001994.p1	15.564	+	AF530062 AB463196 TSC_hg19_v1_chr3_-_64009149 BC000630 AK095059 AY568086 D14663 NM_014814 BC012369 BC000904 AK290205 BX647742 AF215935	-7383	-	NM_001128149 AK310745 AK304062	-63076	+	NM_001177387	-132459	+	BC119002 AL833539 NM_198859	194587	-	AK057923 TSC_hg19_v1_chr3_+_64670789 BC040632	654258	+	AB037733 TSC_hg19_v1_chr3_-_64672299	655762	-	AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_001128149|ATXN7|6314|ataxin 7##AK310745|ATXN7|6314|ataxin 7##AK304062|ATXN7|6314|ataxin 7##NM_001177387|ATXN7|6314|ataxin 7##BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)##NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AK057923|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##BC040632|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	0.999909	CTCF.p2:-12:1.000
chr21	46976057	46976182	reg1002113.p1	15.562	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-13787	-	AK303168 NM_001205207	-21585	-	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	-100701	+	TSC_hg19_v1_chr21_+_47063638 AK310131	87510	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	293769	+	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	425566	+	U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1##AK310131|PCBP3|54039|poly(rC) binding protein 3##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1	0.096862	
chr3	183103896	183104031	reg1002668.p1	15.561	+	TSC_hg19_v1_chr3_+_182971608 AK091474 AX747008	-132357	+	AB209517 TSC_hg19_v1_chr3_+_182971343	-132685	+	TSC_hg19_v1_chr3_+_182970969 NM_032047 AK074424	-133015	+	NM_015078 BC064632 AK124500 AK310962	41976	-	TSC_hg19_v1_chr3_+_183165436 AK057000	61467	+	AF441792 CU689348 DQ894788 EU176275 TSC_hg19_v1_chr3_-_183273495 AK097125 AK314473 BX648370 BC032348 NM_130446	169489	-	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK057000|LOC100505687|100505687|uncharacterized LOC100505687##AF441792|KLHL6|89857|kelch-like 6 (Drosophila)##DQ894788|KLHL6|89857|kelch-like 6 (Drosophila)##EU176275|KLHL6|89857|kelch-like 6 (Drosophila)##AK097125|KLHL6|89857|kelch-like 6 (Drosophila)##AK314473|KLHL6|89857|kelch-like 6 (Drosophila)##BX648370|KLHL6|89857|kelch-like 6 (Drosophila)##BC032348|KLHL6|89857|kelch-like 6 (Drosophila)##NM_130446|KLHL6|89857|kelch-like 6 (Drosophila)	0.936329	CTCF.p2:8:0.936
chr10	13702114	13702246	reg1001902.p1	15.558	+	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-73193	+	NM_003675 TSC_hg19_v1_chr10_+_13628948	-73237	+	BC031618 AK097602 NM_001100912 NM_152751	-157221	-	TSC_hg19_v1_chr10_-_13749648 AK057828	47509	-	TSC_hg19_v1_chr10_-_14050453 AK001072	348312	-	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	670670	-	AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC031618|BEND7|222389|BEN domain containing 7##AK097602|BEND7|222389|BEN domain containing 7##NM_001100912|BEND7|222389|BEN domain containing 7##NM_152751|BEND7|222389|BEN domain containing 7##AK057828|FRMD4A|55691|FERM domain containing 4A##AK001072|FRMD4A|55691|FERM domain containing 4A##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A	0.935046	CTCF.p2:-21:0.935
chr11	60598616	60598740	reg1002345.p1	15.558	+	AK122633 NM_206893 BC137259 BC137263	-45833	+	NM_001098835 NM_152717 AK300233 BC031610 AK091846 AX747218 AY584608 AY584609	-74269	+	AF237905 NM_031457 AK310969 AK310884 AK315901 BC022895 AK308413 AF350504 AK310872	-131546	+	NM_024098 TSC_hg19_v1_chr11_+_60609543 AK025974 AK302329 AK123775 BC001378 DQ892603 DQ895844 DQ501251	10843	+	AF144308 AK291371 AK313849 TSC_hg19_v1_chr11_-_60623424 AB008535 NM_004778	24754	-	NM_207341	36336	+	AK122633|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_206893|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137259|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137263|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_001098835|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##NM_152717|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK300233|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##BC031610|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK091846|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584608|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584609|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AF237905|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_031457|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310969|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310884|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK315901|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##BC022895|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK308413|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AF350504|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310872|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_024098|CCDC86|79080|coiled-coil domain containing 86##AK025974|CCDC86|79080|coiled-coil domain containing 86##AK302329|CCDC86|79080|coiled-coil domain containing 86##AK123775|CCDC86|79080|coiled-coil domain containing 86##BC001378|CCDC86|79080|coiled-coil domain containing 86##DQ892603|CCDC86|79080|coiled-coil domain containing 86##DQ895844|CCDC86|79080|coiled-coil domain containing 86##DQ501251|CCDC86|79080|coiled-coil domain containing 86##AF144308|PTGDR2|11251|prostaglandin D2 receptor 2##AK291371|PTGDR2|11251|prostaglandin D2 receptor 2##AK313849|PTGDR2|11251|prostaglandin D2 receptor 2##AB008535|PTGDR2|11251|prostaglandin D2 receptor 2##NM_004778|PTGDR2|11251|prostaglandin D2 receptor 2##NM_207341|ZP1|22917|zona pellucida glycoprotein 1 (sperm receptor)	0.999745	CTCF.p2:-1:1.000
chr11	107769128	107769248	reg1002216.p1	15.557	+	NM_017515	-39275	-	AK300582 TSC_hg19_v1_chr11_-_107729530 BC039195	-39600	-	CU691672 TSC_hg19_v1_chr11_-_107729514 AK023080 BC048302	-39683	-	TSC_hg19_v1_chr11_+_107799171 AK292969 BC028064 NM_017516 X99962	30047	+	NM_003478 AK125294	110244	+	TSC_hg19_v1_chr11_+_107879644 AK292575 BC063306	110439	+	NM_017515|SLC35F2|54733|solute carrier family 35, member F2##AK300582|SLC35F2|54733|solute carrier family 35, member F2##BC039195|SLC35F2|54733|solute carrier family 35, member F2##AK023080|SLC35F2|54733|solute carrier family 35, member F2##BC048302|SLC35F2|54733|solute carrier family 35, member F2##AK292969|RAB39A|54734|RAB39A, member RAS oncogene family##BC028064|RAB39A|54734|RAB39A, member RAS oncogene family##NM_017516|RAB39A|54734|RAB39A, member RAS oncogene family##X99962|RAB39A|54734|RAB39A, member RAS oncogene family##NM_003478|CUL5|8065|cullin 5##AK125294|CUL5|8065|cullin 5##AK292575|CUL5|8065|cullin 5##BC063306|CUL5|8065|cullin 5	0.0	
chr2	20842275	20842383	reg1001658.p2	15.557	+	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-195497	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-291910	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-315196	-	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	8519	-	AF522369 NM_182828	24094	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	180524	-	AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43	1.01667	CTCF.p2:8:0.999
chr2	85779321	85779443	reg1001306.p2	15.557	+	TSC_hg19_v1_chr2_+_85766291 AK291126 BC001686 BC001854 X68836 DQ083239 AB529143 CU674832	-13032	+	TSC_hg19_v1_chr2_+_85766290 AK294208 AK293841 AK297758 AK297797 AK303877 AK308591 AK311142 AK311612	-13094	+	NM_005911	-13282	+	CU680718 DQ892948 DQ896196 EU847509 TSC_hg19_v1_chr2_-_85788597 BC013979 AK310483 AK297397 BC004422 AK222827 AK225663 AK298982 AK313126 M81592	9209	-	TSC_hg19_v1_chr2_-_85788644 NM_000821 NM_001142269	9273	-	NM_003761 TSC_hg19_v1_chr2_+_85804673	25267	+	AK291126|MAT2A|4144|methionine adenosyltransferase II, alpha##BC001686|MAT2A|4144|methionine adenosyltransferase II, alpha##BC001854|MAT2A|4144|methionine adenosyltransferase II, alpha##X68836|MAT2A|4144|methionine adenosyltransferase II, alpha##DQ083239|MAT2A|4144|methionine adenosyltransferase II, alpha##AK293841|MAT2A|4144|methionine adenosyltransferase II, alpha##AK297758|MAT2A|4144|methionine adenosyltransferase II, alpha##AK297797|MAT2A|4144|methionine adenosyltransferase II, alpha##AK303877|MAT2A|4144|methionine adenosyltransferase II, alpha##AK308591|MAT2A|4144|methionine adenosyltransferase II, alpha##NM_005911|MAT2A|4144|methionine adenosyltransferase II, alpha##DQ892948|GGCX|2677|gamma-glutamyl carboxylase##DQ896196|GGCX|2677|gamma-glutamyl carboxylase##EU847509|GGCX|2677|gamma-glutamyl carboxylase##BC013979|GGCX|2677|gamma-glutamyl carboxylase##AK310483|GGCX|2677|gamma-glutamyl carboxylase##AK297397|GGCX|2677|gamma-glutamyl carboxylase##BC004422|GGCX|2677|gamma-glutamyl carboxylase##AK222827|GGCX|2677|gamma-glutamyl carboxylase##AK225663|GGCX|2677|gamma-glutamyl carboxylase##AK298982|GGCX|2677|gamma-glutamyl carboxylase##AK313126|GGCX|2677|gamma-glutamyl carboxylase##M81592|GGCX|2677|gamma-glutamyl carboxylase##NM_000821|GGCX|2677|gamma-glutamyl carboxylase##NM_001142269|GGCX|2677|gamma-glutamyl carboxylase##NM_003761|VAMP8|8673|vesicle-associated membrane protein 8 (endobrevin)	0.999604	CTCF.p2:-2:1.000
chr10	26846128	26846240	reg1001684.p1	15.555	+	TSC_hg19_v1_chr10_+_26727703 AY152730	-118478	+	TSC_hg19_v1_chr10_+_26727679 BC054516	-118516	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	-118867	+	AK096048 TSC_hg19_v1_chr10_-_26986612	140400	-	TSC_hg19_v1_chr10_+_26986597 AK024802 AK223414 AB210838 NM_014317 BC063635 BC049211 AF118395	140462	+	TSC_hg19_v1_chr10_-_27057776 AK315914	211633	-	AY152730|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK024802|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK223414|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AB210838|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##NM_014317|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC063635|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC049211|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AF118395|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK315914|ABI1|10006|abl-interactor 1	0.902324	CTCF.p2:10:0.902
chr3	14503368	14503478	reg1001009.p1	15.555	+	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	-59307	+	TSC_hg19_v1_chr3_+_14444072 AK303649	-59354	+	TSC_hg19_v1_chr3_+_14220355 AJ238095 AB463841 CR457185	-283072	+	NM_001080423	80164	-	TSC_hg19_v1_chr3_+_14693268 NM_016474 AK091158 AX746816 BC005199 BC033897 BC013999	189835	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	189860	+	NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AJ238095|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##CR457185|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2##NM_016474|C3orf19|51244|chromosome 3 open reading frame 19##AK091158|C3orf19|51244|chromosome 3 open reading frame 19##BC005199|C3orf19|51244|chromosome 3 open reading frame 19##BC033897|C3orf19|51244|chromosome 3 open reading frame 19##BC013999|C3orf19|51244|chromosome 3 open reading frame 19##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19	0.640273	CTCF.p2:19:0.481
chr1	53951251	53951399	reg1002203.p1	15.549	+	AK302085 TSC_hg19_v1_chr1_+_53925533 BC029566	-25795	+	AK057273 NM_033067 AJ291671	-26218	+	TSC_hg19_v1_chr1_-_53793743 NM_001018054 NM_004631 NM_017522 NM_033300	-157544	-	AK090634 AX746550 NM_147193	248551	-	DQ141696 AK302910 BX648031 TSC_hg19_v1_chr1_-_54304004 AK298909 AK295000	352649	-	AK001269 AL354612 AL354613 TSC_hg19_v1_chr1_-_54304168 BC003082 NM_001168551 NM_018087	352840	-	AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1##DQ141696|TMEM48|55706|transmembrane protein 48##AK302910|TMEM48|55706|transmembrane protein 48##BX648031|TMEM48|55706|transmembrane protein 48##AK298909|TMEM48|55706|transmembrane protein 48##AK295000|TMEM48|55706|transmembrane protein 48##AK001269|TMEM48|55706|transmembrane protein 48##AL354612|TMEM48|55706|transmembrane protein 48##AL354613|TMEM48|55706|transmembrane protein 48##BC003082|TMEM48|55706|transmembrane protein 48##NM_001168551|TMEM48|55706|transmembrane protein 48##NM_018087|TMEM48|55706|transmembrane protein 48	0.988108	CTCF.p2:-12:0.988
chr12	6304975	6305100	reg1001393.p1	15.548	+	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	-71278	-	AJ272204 NM_020373	-249640	-	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	-250563	-	TSC_hg19_v1_chr12_+_6309565 NM_001769 AK315219 AK308700 AK296332 AK309527 AY966455 X60111 AK296894 AK298431 BC011988 M38690 AY423720 DQ891314 DQ894498 AB590218 CU680148 L34068	4533	+	AK001527 NM_018173 BC104751 BC105961 BC109095	114596	+	TSC_hg19_v1_chr12_+_6419886 BC040273	114848	+	X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor##AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##NM_001769|CD9|928|CD9 molecule##AK315219|CD9|928|CD9 molecule##AK308700|CD9|928|CD9 molecule##AK296332|CD9|928|CD9 molecule##AK309527|CD9|928|CD9 molecule##AY966455|CD9|928|CD9 molecule##X60111|CD9|928|CD9 molecule##AK296894|CD9|928|CD9 molecule##AK298431|CD9|928|CD9 molecule##BC011988|CD9|928|CD9 molecule##M38690|CD9|928|CD9 molecule##AY423720|CD9|928|CD9 molecule##DQ891314|CD9|928|CD9 molecule##DQ894498|CD9|928|CD9 molecule##L34068|CD9|928|CD9 molecule##AK001527|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_018173|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC104751|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC105961|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC109095|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC040273|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6	0.835147	CTCF.p2:-21:0.835
chr1	111765605	111765753	reg1002351.p4	15.546	+	TSC_hg19_v1_chr1_-_111747005 AK026110	-18704	-	TSC_hg19_v1_chr1_-_111743297 AK301583	-22369	-	TSC_hg19_v1_chr1_-_111743272 BC004557 NM_024901	-22409	-	NM_001025197 NM_004000 U58514 U49835 BC011460 BT006767 DQ893705 CU679936	4637	+	NM_001025199 U58515 AK298466 AK223316	6713	+	AK290702 AB025008 AB025009 AY825504 NM_021797 AF290004 AY789444 NM_201653	67826	+	AK026110|DENND2D|79961|DENN/MADD domain containing 2D##AK301583|DENND2D|79961|DENN/MADD domain containing 2D##BC004557|DENND2D|79961|DENN/MADD domain containing 2D##NM_024901|DENND2D|79961|DENN/MADD domain containing 2D##NM_001025197|CHI3L2|1117|chitinase 3-like 2##NM_004000|CHI3L2|1117|chitinase 3-like 2##U58514|CHI3L2|1117|chitinase 3-like 2##U49835|CHI3L2|1117|chitinase 3-like 2##BC011460|CHI3L2|1117|chitinase 3-like 2##BT006767|CHI3L2|1117|chitinase 3-like 2##DQ893705|CHI3L2|1117|chitinase 3-like 2##NM_001025199|CHI3L2|1117|chitinase 3-like 2##U58515|CHI3L2|1117|chitinase 3-like 2##AK298466|CHI3L2|1117|chitinase 3-like 2##AK223316|CHI3L2|1117|chitinase 3-like 2##AK290702|CHIA|27159|chitinase, acidic##AB025008|CHIA|27159|chitinase, acidic##AB025009|CHIA|27159|chitinase, acidic##AY825504|CHIA|27159|chitinase, acidic##NM_021797|CHIA|27159|chitinase, acidic##AF290004|CHIA|27159|chitinase, acidic##AY789444|CHIA|27159|chitinase, acidic##NM_201653|CHIA|27159|chitinase, acidic	0.980707	CTCF.p2:-14:0.981
chr8	40057274	40057391	reg1001681.p2	15.545	+	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	-46314	+	AK128691 NM_194294	-264859	+	NM_002164 AK313259 BC027882 X17668 AY221100 CU693308 JF772862	-285948	+	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	698005	-	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	1109698	-	TSC_hg19_v1_chr8_+_41348077 NM_001174124 NM_016099	1290741	+	BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1##AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1##X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1##AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1##JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1##NM_001174124|GOLGA7|51125|golgin A7##NM_016099|GOLGA7|51125|golgin A7	0.454825	CTCF.p2:10:0.455
chr15	94707597	94707721	reg1001723.p1	15.544	+	AB463222 AM392685 BC146682 AK074980 BC140838 BC151132 AL136826 TSC_hg19_v1_chr15_-_93632430 AK074910 AK291365 NM_020211	-1075306	-	NM_001166287	-1075908	-	AK299363 NM_001166283	-1090506	-	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	67199	+	NM_001159643 NM_018349 AY656717 BC131527	133802	+	NM_001159644 BC025708 BC111024 AK002037	191650	+	AM392685|RGMA|56963|RGM domain family, member A##BC146682|RGMA|56963|RGM domain family, member A##AK074980|RGMA|56963|RGM domain family, member A##BC140838|RGMA|56963|RGM domain family, member A##BC151132|RGMA|56963|RGM domain family, member A##AL136826|RGMA|56963|RGM domain family, member A##AK074910|RGMA|56963|RGM domain family, member A##NM_020211|RGMA|56963|RGM domain family, member A##NM_001166287|RGMA|56963|RGM domain family, member A##AK299363|RGMA|56963|RGM domain family, member A##NM_001166283|RGMA|56963|RGM domain family, member A##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2	0.995837	CTCF.p2:-20:0.996
chr19	18043420	18043547	reg1002150.p1	15.542	+	BX648217 NM_000453 U66088 D87920	-60653	+	TSC_hg19_v1_chr19_+_17970726 BC066319 AK297323 AK222647 AK311774 D28393 NM_000980 AK297358 AK300809 BC007512 BC071920 L05093 X80822 AB528676 CU688140	-72766	+	TSC_hg19_v1_chr19_-_17958822 U31601 AK296383 NM_000215 AK304392	-84637	-	TSC_hg19_v1_chr19_+_18043824 NM_001136203	341	+	BC013949 NM_138442	2421	+	NM_002248 U69883	18627	+	BX648217|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##NM_000453|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##U66088|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##D87920|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##BC066319|RPL18A|6142|ribosomal protein L18a##AK297323|RPL18A|6142|ribosomal protein L18a##AK222647|RPL18A|6142|ribosomal protein L18a##AK311774|RPL18A|6142|ribosomal protein L18a##D28393|RPL18A|6142|ribosomal protein L18a##NM_000980|RPL18A|6142|ribosomal protein L18a##AK297358|RPL18A|6142|ribosomal protein L18a##AK300809|RPL18A|6142|ribosomal protein L18a##BC007512|RPL18A|6142|ribosomal protein L18a##BC071920|RPL18A|6142|ribosomal protein L18a##L05093|RPL18A|6142|ribosomal protein L18a##X80822|RPL18A|6142|ribosomal protein L18a##U31601|JAK3|3718|Janus kinase 3##AK296383|JAK3|3718|Janus kinase 3##NM_000215|JAK3|3718|Janus kinase 3##AK304392|JAK3|3718|Janus kinase 3##NM_001136203|CCDC124|115098|coiled-coil domain containing 124##BC013949|CCDC124|115098|coiled-coil domain containing 124##NM_138442|CCDC124|115098|coiled-coil domain containing 124##NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1	0.278297	CTCF.p2:10:0.278
chr9	97365676	97365784	reg1001327.p1	15.542	+	CR536483 HQ258389 BC113632 BC117477 NM_003837 Y10812	-9690	-	TSC_hg19_v1_chr9_+_97136850 NM_032558	-228897	+	HQ258506 BC130390 BC143798 NM_017561	-274816	-	AF073475 CU680450 D26054 D26055 D26056 AY544122 TSC_hg19_v1_chr9_-_97401681	35906	-	TSC_hg19_v1_chr9_-_97401794 BC012927 M19922	36056	-	TSC_hg19_v1_chr9_-_97401835 AK223395 AK316583 NM_000507	36158	-	CR536483|FBP2|8789|fructose-1,6-bisphosphatase 2##HQ258389|FBP2|8789|fructose-1,6-bisphosphatase 2##BC113632|FBP2|8789|fructose-1,6-bisphosphatase 2##BC117477|FBP2|8789|fructose-1,6-bisphosphatase 2##NM_003837|FBP2|8789|fructose-1,6-bisphosphatase 2##Y10812|FBP2|8789|fructose-1,6-bisphosphatase 2##NM_032558|HIATL1|84641|hippocampus abundant transcript-like 1##HQ258506|FAM22F|54754|family with sequence similarity 22, member F##BC130390|FAM22F|54754|family with sequence similarity 22, member F##BC143798|FAM22F|54754|family with sequence similarity 22, member F##NM_017561|FAM22F|54754|family with sequence similarity 22, member F##AF073475|FBP1|2203|fructose-1,6-bisphosphatase 1##D26054|FBP1|2203|fructose-1,6-bisphosphatase 1##D26055|FBP1|2203|fructose-1,6-bisphosphatase 1##D26056|FBP1|2203|fructose-1,6-bisphosphatase 1##AY544122|FBP1|2203|fructose-1,6-bisphosphatase 1##BC012927|FBP1|2203|fructose-1,6-bisphosphatase 1##M19922|FBP1|2203|fructose-1,6-bisphosphatase 1##AK223395|FBP1|2203|fructose-1,6-bisphosphatase 1##AK316583|FBP1|2203|fructose-1,6-bisphosphatase 1##NM_000507|FBP1|2203|fructose-1,6-bisphosphatase 1	0.969481	CTCF.p2:12:0.969
chr10	134272143	134272264	reg1002129.p1	15.540	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-13520	+	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	-61494	+	TSC_hg19_v1_chr10_+_134145696 AK098652 BC050097 AK295953 AB051461 BC029902 NM_001143757 AK097418	-126493	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	79109	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	327303	-	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	483835	-	BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##AK098652|LRRC27|80313|leucine rich repeat containing 27##BC050097|LRRC27|80313|leucine rich repeat containing 27##AK295953|LRRC27|80313|leucine rich repeat containing 27##AB051461|LRRC27|80313|leucine rich repeat containing 27##BC029902|LRRC27|80313|leucine rich repeat containing 27##NM_001143757|LRRC27|80313|leucine rich repeat containing 27##AK097418|LRRC27|80313|leucine rich repeat containing 27##BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40	0.999255	CTCF.p2:-15:0.999
chr18	5868332	5868466	reg1002290.p1	15.539	+	TSC_hg19_v1_chr18_-_5630663 BC008377	-237752	-	AF069072 AB023204 NM_012307 TSC_hg19_v1_chr18_-_5543997 AK128531	-324411	-	NM_001243704	-571348	-	NM_001080209	23703	-	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	546516	-	NM_001243517	643015	+	BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AF069072|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AB023204|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_012307|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AK128531|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_001243704|ZFP161|7541|zinc finger protein 161 homolog (mouse)##NM_001080209|TMEM200C|645369|transmembrane protein 200C##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480	0.927509	CTCF.p2:-14:0.928
chr12	103890086	103890186	reg1000900.p2	15.537	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	-390	-	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-538044	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-538615	+	AY311388 AJ295695 NM_017564 AB052958	90925	+	AB032773 TSC_hg19_v1_chr12_-_104234857	344688	-	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	344843	-	AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3	0.951971	CTCF.p2:8:0.952
chr12	31789682	31789819	reg1001475.p2	15.535	+	TSC_hg19_v1_chr12_-_31743924 BC068580 NM_144973	-45832	-	BC000024 NM_001135811 NM_021238 TSC_hg19_v1_chr12_-_31479121 NM_001135812	-310611	-	TSC_hg19_v1_chr12_-_31479085 AF212220	-310649	-	AK290248 NM_001135864	10343	+	BC039535 NM_173802	22370	+	NM_001135863 TSC_hg19_v1_chr12_+_31812621 AL832339 BC039107	22864	+	BC068580|DENND5B|160518|DENN/MADD domain containing 5B##NM_144973|DENND5B|160518|DENN/MADD domain containing 5B##BC000024|FAM60A|58516|family with sequence similarity 60, member A##NM_001135811|FAM60A|58516|family with sequence similarity 60, member A##NM_021238|FAM60A|58516|family with sequence similarity 60, member A##NM_001135812|FAM60A|58516|family with sequence similarity 60, member A##AF212220|FAM60A|58516|family with sequence similarity 60, member A##AK290248|METTL20|254013|methyltransferase like 20##NM_001135864|METTL20|254013|methyltransferase like 20##BC039535|METTL20|254013|methyltransferase like 20##NM_173802|METTL20|254013|methyltransferase like 20##NM_001135863|METTL20|254013|methyltransferase like 20##AL832339|METTL20|254013|methyltransferase like 20##BC039107|METTL20|254013|methyltransferase like 20	0.999977	CTCF.p2:16:1.000
chr16	74743445	74743561	reg1001634.p1	15.535	+	BC028141 AK091708 AX747141 NM_001142497 NM_152649	-8766	-	TSC_hg19_v1_chr16_-_74700775 NM_018124	-42726	-	TSC_hg19_v1_chr16_-_74700758 AK291200	-42751	-	TSC_hg19_v1_chr16_-_74808693 AK315512 BC002679 BC004263	65082	-	BC017049 TSC_hg19_v1_chr16_-_74808722 AK058016 AK303878 NM_024306	65221	-	CU678744 TSC_hg19_v1_chr16_-_75018978 BC004519	275456	-	BC028141|MLKL|197259|mixed lineage kinase domain-like##AK091708|MLKL|197259|mixed lineage kinase domain-like##NM_001142497|MLKL|197259|mixed lineage kinase domain-like##NM_152649|MLKL|197259|mixed lineage kinase domain-like##NM_018124|RFWD3|55159|ring finger and WD repeat domain 3##AK291200|RFWD3|55159|ring finger and WD repeat domain 3##AK315512|FA2H|79152|fatty acid 2-hydroxylase##BC002679|FA2H|79152|fatty acid 2-hydroxylase##BC004263|FA2H|79152|fatty acid 2-hydroxylase##BC017049|FA2H|79152|fatty acid 2-hydroxylase##AK058016|FA2H|79152|fatty acid 2-hydroxylase##AK303878|FA2H|79152|fatty acid 2-hydroxylase##NM_024306|FA2H|79152|fatty acid 2-hydroxylase##BC004519|WDR59|79726|WD repeat domain 59	0.999905	CTCF.p2:-1:1.000
chr9	72287900	72288026	reg1002274.p1	15.535	+	TSC_hg19_v1_chr9_-_72287241 AF029106 AF047347 NM_001163	-759	-	AK126127 NM_004816	-343723	+	NM_001127608	-348476	+	TSC_hg19_v1_chr9_-_72374870 AL832683 BC053622 NM_001099666	86933	-	NM_001010940 BC150564 BC136709 BC144373 BC144374 BC144375	147773	+	BC040299 BC045569 NM_153267 BC063634	370544	+	AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##AK126127|FAM189A2|9413|family with sequence similarity 189, member A2##NM_004816|FAM189A2|9413|family with sequence similarity 189, member A2##NM_001127608|FAM189A2|9413|family with sequence similarity 189, member A2##AL832683|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##BC053622|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##NM_001099666|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##NM_001010940|C9orf135|138255|chromosome 9 open reading frame 135##BC150564|C9orf135|138255|chromosome 9 open reading frame 135##BC136709|C9orf135|138255|chromosome 9 open reading frame 135##BC144373|C9orf135|138255|chromosome 9 open reading frame 135##BC144374|C9orf135|138255|chromosome 9 open reading frame 135##BC144375|C9orf135|138255|chromosome 9 open reading frame 135##BC040299|MAMDC2|256691|MAM domain containing 2##BC045569|MAMDC2|256691|MAM domain containing 2##NM_153267|MAMDC2|256691|MAM domain containing 2##BC063634|MAMDC2|256691|MAM domain containing 2	0.153231	
chr11	61849603	61849738	reg1001502.p1	15.534	+	TSC_hg19_v1_chr11_+_61735277 AK093779 AX748301 BC132894 BC132896	-114336	+	TSC_hg19_v1_chr11_-_61735173 NM_002032	-114523	-	BC020300 BC015946 BC063514 TSC_hg19_v1_chr11_-_61735103 BC011359 BC070494 AB062402 BC013724 BC073750 BC000857 BC035441 AK307190 AK311818 BC016009 BC066341 BC066961 BC104643 BC105802 L20941 D28463	-114583	-	TSC_hg19_v1_chr11_+_61891482 AK307633 BC098576 NM_001040694 NM_020238 AK056195 AK310714 BC032678	41802	+	BC062693 AJ224171 BC069170 BC069289 NM_006552	108028	+	AF071219 NM_002407 BC062218 AJ224173	126481	+	AK093779|LOC399900|399900|uncharacterized LOC399900##BC132894|LOC399900|399900|uncharacterized LOC399900##BC132896|LOC399900|399900|uncharacterized LOC399900##NM_002032|FTH1|2495|ferritin, heavy polypeptide 1##BC020300|FTH1|2495|ferritin, heavy polypeptide 1##BC015946|FTH1|2495|ferritin, heavy polypeptide 1##BC063514|FTH1|2495|ferritin, heavy polypeptide 1##BC011359|FTH1|2495|ferritin, heavy polypeptide 1##BC070494|FTH1|2495|ferritin, heavy polypeptide 1##AB062402|FTH1|2495|ferritin, heavy polypeptide 1##BC013724|FTH1|2495|ferritin, heavy polypeptide 1##BC073750|FTH1|2495|ferritin, heavy polypeptide 1##BC000857|FTH1|2495|ferritin, heavy polypeptide 1##BC035441|FTH1|2495|ferritin, heavy polypeptide 1##AK307190|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK311818|FTH1|2495|ferritin, heavy polypeptide 1##BC016009|FTH1|2495|ferritin, heavy polypeptide 1##BC066341|FTH1|2495|ferritin, heavy polypeptide 1##BC066961|FTH1|2495|ferritin, heavy polypeptide 1##BC104643|FTH1|2495|ferritin, heavy polypeptide 1##BC105802|FTH1|2495|ferritin, heavy polypeptide 1##L20941|FTH1|2495|ferritin, heavy polypeptide 1##D28463|FTH1|2495|ferritin, heavy polypeptide 1##AK307633|INCENP|3619|inner centromere protein antigens 135/155kDa##BC098576|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_001040694|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_020238|INCENP|3619|inner centromere protein antigens 135/155kDa##AK056195|INCENP|3619|inner centromere protein antigens 135/155kDa##AK310714|INCENP|3619|inner centromere protein antigens 135/155kDa##BC032678|INCENP|3619|inner centromere protein antigens 135/155kDa##BC062693|SCGB1D1|10648|secretoglobin, family 1D, member 1##AJ224171|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069170|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069289|SCGB1D1|10648|secretoglobin, family 1D, member 1##NM_006552|SCGB1D1|10648|secretoglobin, family 1D, member 1##AF071219|SCGB2A1|4246|secretoglobin, family 2A, member 1##NM_002407|SCGB2A1|4246|secretoglobin, family 2A, member 1##BC062218|SCGB2A1|4246|secretoglobin, family 2A, member 1##AJ224173|SCGB2A1|4246|secretoglobin, family 2A, member 1	0.376668	CTCF.p2:30:0.377
chr12	49189737	49189864	reg1002645.p1	15.534	+	TSC_hg19_v1_chr12_-_49182812 AB007882 NM_020983 BC064923	-6992	-	AK225224 NM_015270 AF250226	-11907	-	AF045161 EF688064 TSC_hg19_v1_chr12_-_49110514 AF048730 AK290990 NM_001240	-79182	-	NM_001206917 AK304537 AK300901	18438	+	TSC_hg19_v1_chr12_+_49208615 AK122911	18845	+	TSC_hg19_v1_chr12_+_49209373 NM_001206916 AK297639 AK316323	19536	+	AB007882|ADCY6|112|adenylate cyclase 6##NM_020983|ADCY6|112|adenylate cyclase 6##BC064923|ADCY6|112|adenylate cyclase 6##AK225224|ADCY6|112|adenylate cyclase 6##NM_015270|ADCY6|112|adenylate cyclase 6##AF250226|ADCY6|112|adenylate cyclase 6##AF045161|CCNT1|904|cyclin T1##EF688064|CCNT1|904|cyclin T1##AF048730|CCNT1|904|cyclin T1##AK290990|CCNT1|904|cyclin T1##NM_001240|CCNT1|904|cyclin T1##NM_001206917|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK304537|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK300901|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK122911|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_001206916|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK297639|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK316323|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	0.964921	CTCF.p2:1:0.965
chr17	34476436	34476568	reg1001970.p1	15.534	+	AY766446 AY766448 NM_002984 BC107433 M23502 BC104226 BC104227 M25316 X53683 BC027961 X16166 AY312578 CR542119 M57503	-45235	+	D63785 AB463487 BC171831 BC171891 BC071834 M25315 D00044 M23452 X03754 NM_002983	-59057	-	AB000221 NM_002988 Y13710 BC096124 BC096125 BC096126 BC096127 BC069700 AB590849 AB451458 CR407660	-84832	+	BC033670 AK301823 BC071680 AK225985 AK292257 NM_001001417	27448	-	D63785 BT006783 BC146914 BC146919 BC147008 BC147013 BC007783 X52149 BC027888 BC063472 NM_001001437 NM_021006 BC107710	47603	-	AY766447 AY766449 AY766450 AY766451 AY766452 AY766453 AY766454 AY766455 AY766456 AY766457 AY766458 BC070310 BC092445 NM_001001435 NM_207007 BC071718 BC130456 BC130458 BC144393 BC144394 HQ258694	62000	+	AY766446|CCL4|6351|chemokine (C-C motif) ligand 4##AY766448|CCL4|6351|chemokine (C-C motif) ligand 4##NM_002984|CCL4|6351|chemokine (C-C motif) ligand 4##BC107433|CCL4|6351|chemokine (C-C motif) ligand 4##M23502|CCL4|6351|chemokine (C-C motif) ligand 4##BC104226|CCL4|6351|chemokine (C-C motif) ligand 4##BC104227|CCL4|6351|chemokine (C-C motif) ligand 4##M25316|CCL4|6351|chemokine (C-C motif) ligand 4##X53683|CCL4|6351|chemokine (C-C motif) ligand 4##BC027961|CCL4|6351|chemokine (C-C motif) ligand 4##X16166|CCL4|6351|chemokine (C-C motif) ligand 4##AY312578|CCL4|6351|chemokine (C-C motif) ligand 4##CR542119|CCL4|6351|chemokine (C-C motif) ligand 4##M57503|CCL4|6351|chemokine (C-C motif) ligand 4##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BC171831|CCL3|6348|chemokine (C-C motif) ligand 3##BC171891|CCL3|6348|chemokine (C-C motif) ligand 3##BC071834|CCL3|6348|chemokine (C-C motif) ligand 3##M25315|CCL3|6348|chemokine (C-C motif) ligand 3##D00044|CCL3|6348|chemokine (C-C motif) ligand 3##M23452|CCL3|6348|chemokine (C-C motif) ligand 3##X03754|CCL3|6348|chemokine (C-C motif) ligand 3##NM_002983|CCL3|6348|chemokine (C-C motif) ligand 3##AB000221|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##NM_002988|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##Y13710|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096124|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096125|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096126|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096127|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC069700|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##AB451458|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##CR407660|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK292257|TBC1D3B|414059|TBC1 domain family, member 3B##NM_001001417|TBC1D3B|414059|TBC1 domain family, member 3B##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BT006783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC146914|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC146919|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147008|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147013|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC007783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##X52149|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC027888|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC063472|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_001001437|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_021006|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC107710|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##AY766447|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766449|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766450|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766451|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766452|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766453|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766454|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766455|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766457|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC070310|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC092445|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_001001435|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_207007|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##BC130456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC130458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144393|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144394|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##HQ258694|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2	0.99888	CTCF.p2:21:0.999
chr7	93532240	93532378	reg1001264.p2	15.531	+	CU675117 DQ892533 DQ895744 L27624 AY691946 D29992 AK075427 AK024817 AK075425 AK092499 AK129833 AK313260 BC005330 NM_006528 TSC_hg19_v1_chr7_-_93520066	-12280	-	AB022177 AK313996 NM_001164737 NM_001742	-328271	-	AB022178 NM_001164738	-343188	-	BC029367 NM_021955	3510	+	NM_004126 BC009709	18747	+	BT009853 DQ894078 BC000899 TSC_hg19_v1_chr7_-_93633668 CR749267 AF007551 AK313984 BC012595 NM_005868	101305	-	DQ892533|TFPI2|7980|tissue factor pathway inhibitor 2##DQ895744|TFPI2|7980|tissue factor pathway inhibitor 2##L27624|TFPI2|7980|tissue factor pathway inhibitor 2##AY691946|TFPI2|7980|tissue factor pathway inhibitor 2##D29992|TFPI2|7980|tissue factor pathway inhibitor 2##AK075427|TFPI2|7980|tissue factor pathway inhibitor 2##AK024817|TFPI2|7980|tissue factor pathway inhibitor 2##AK075425|TFPI2|7980|tissue factor pathway inhibitor 2##AK092499|TFPI2|7980|tissue factor pathway inhibitor 2##AK129833|TFPI2|7980|tissue factor pathway inhibitor 2##AK313260|TFPI2|7980|tissue factor pathway inhibitor 2##BC005330|TFPI2|7980|tissue factor pathway inhibitor 2##NM_006528|TFPI2|7980|tissue factor pathway inhibitor 2##AB022177|CALCR|799|calcitonin receptor##AK313996|CALCR|799|calcitonin receptor##NM_001164737|CALCR|799|calcitonin receptor##NM_001742|CALCR|799|calcitonin receptor##AB022178|CALCR|799|calcitonin receptor##NM_001164738|CALCR|799|calcitonin receptor##BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	0.93048	CTCF.p2:-16:0.930
chr3	32989343	32989473	reg1002180.p1	15.527	+	DQ232881 NM_001039111	-129899	+	TSC_hg19_v1_chr3_+_32726700 AK023227 AK022952 NM_015442 AK309670 BC006382 BC002931 BC002928 AK297085 AK298693 CU678296 CU678298 DQ892895 DQ896143 EU831494 EU831581	-262603	+	BX649189 TSC_hg19_v1_chr3_-_32612288 AK222573 AK222653 BC131620 AF078849 AK074348 AK293253 NM_016141	-377134	-	BC071751 NM_005508 AK292674	3692	+	TSC_hg19_v1_chr3_-_33138279 AK300021 AK126979 AK128242 NM_001039770 NM_001136238	148862	-	NM_001079811 TSC_hg19_v1_chr3_-_33138315	148925	-	DQ232881|TRIM71|131405|tripartite motif containing 71##NM_001039111|TRIM71|131405|tripartite motif containing 71##AK023227|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK022952|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##NM_015442|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK309670|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC006382|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002931|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002928|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK297085|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK298693|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ892895|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ896143|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831494|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831581|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC071751|CCR4|1233|chemokine (C-C motif) receptor 4##NM_005508|CCR4|1233|chemokine (C-C motif) receptor 4##AK292674|CCR4|1233|chemokine (C-C motif) receptor 4##AK300021|GLB1|2720|galactosidase, beta 1##AK126979|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##AK128242|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001039770|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001136238|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001079811|GLB1|2720|galactosidase, beta 1	0.623484	CTCF.p2:-24:0.623
chr3	93968508	93968605	reg1001167.p2	15.527	+	AK122674 NM_001195643	-186490	-	TSC_hg19_v1_chr3_+_93781863 AF169972 BC018432 BC020602 BC057238 NM_022072 AK026262	-186712	+	BC045541 TSC_hg19_v1_chr3_-_93781761 AL832912 BC063379 NM_176815	-186812	-	NM_001080448 TSC_hg19_v1_chr3_+_96533435 AK092565 AX747601	2564874	+	AK302040 AK310249 BC031881 BC067287 AK302080 AL133666 NM_173655	3189915	+	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	3515044	+	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1##AF169972|NSUN3|63899|NOP2/Sun domain family, member 3##BC018432|NSUN3|63899|NOP2/Sun domain family, member 3##BC020602|NSUN3|63899|NOP2/Sun domain family, member 3##BC057238|NSUN3|63899|NOP2/Sun domain family, member 3##NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3##AK026262|NSUN3|63899|NOP2/Sun domain family, member 3##BC045541|DHFRL1|200895|dihydrofolate reductase-like 1##AL832912|DHFRL1|200895|dihydrofolate reductase-like 1##BC063379|DHFRL1|200895|dihydrofolate reductase-like 1##NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001080448|EPHA6|285220|EPH receptor A6##AK092565|EPHA6|285220|EPH receptor A6##AK302040|EPHA6|285220|EPH receptor A6##AK310249|EPHA6|285220|EPH receptor A6##BC031881|EPHA6|285220|EPH receptor A6##BC067287|EPHA6|285220|EPH receptor A6##AK302080|EPHA6|285220|EPH receptor A6##AL133666|EPHA6|285220|EPH receptor A6##NM_173655|EPHA6|285220|EPH receptor A6##BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6	0.999334	CTCF.p2:-5:0.999
chr2	64558118	64558261	reg1002143.p1	15.526	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-186665	-	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	-311684	-	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	-311927	-	TSC_hg19_v1_chr2_+_64681295 NM_014181	123111	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	123459	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	193295	+	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin	1.002756	CTCF.p2:-6:0.899
chr2	69941897	69942029	reg1002209.p1	15.525	+	NM_014911 TSC_hg19_v1_chr2_-_69871063 BC090950	-70871	-	TSC_hg19_v1_chr2_-_69870872 AB028971	-71106	-	TSC_hg19_v1_chr2_-_69870783 AK310951 AK056043	-71195	-	BC063672 NM_001153 BC000182 TSC_hg19_v1_chr2_+_69969232 AK293177	27207	+	BC011659 TSC_hg19_v1_chr2_+_69969265 AK293406 AK303960 AK058017 AK315511 AK293396 M19383 M82809	27302	+	AK024042 TSC_hg19_v1_chr2_+_70056791 BC007420 NM_178439 AK023119	114844	+	NM_014911|AAK1|22848|AP2 associated kinase 1##BC090950|AAK1|22848|AP2 associated kinase 1##AB028971|AAK1|22848|AP2 associated kinase 1##AK310951|AAK1|22848|AP2 associated kinase 1##AK056043|AAK1|22848|AP2 associated kinase 1##BC063672|ANXA4|307|annexin A4##NM_001153|ANXA4|307|annexin A4##BC000182|ANXA4|307|annexin A4##AK293177|ANXA4|307|annexin A4##BC011659|ANXA4|307|annexin A4##AK293406|ANXA4|307|annexin A4##AK303960|ANXA4|307|annexin A4##AK058017|ANXA4|307|annexin A4##AK315511|ANXA4|307|annexin A4##AK293396|ANXA4|307|annexin A4##M19383|ANXA4|307|annexin A4##M82809|ANXA4|307|annexin A4##AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	0.669302	CTCF.p2:10:0.669
chr2	95688175	95688304	reg1002384.p1	15.523	+	AK097438 BC021716 NM_144705 AK296678 CU692394	-150989	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3840236	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-5476521	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	3243	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	99303	-	AB049940 TSC_hg19_v1_chr2_-_95787749 BC014172 NM_031902	99473	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5##AB049940|MRPS5|64969|mitochondrial ribosomal protein S5##BC014172|MRPS5|64969|mitochondrial ribosomal protein S5##NM_031902|MRPS5|64969|mitochondrial ribosomal protein S5	0.0	
chr3	131268321	131268442	reg1001405.p1	15.521	+	TSC_hg19_v1_chr3_-_131221816 CR456720 CU678442 BC002345 X06323 BC003375 AK301377 AK296626 NM_007208	-46627	-	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	-167730	+	TSC_hg19_v1_chr3_+_131080737 AK000532 BC015593	-187638	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	485459	-	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	767857	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	767907	+	CR456720|MRPL3|11222|mitochondrial ribosomal protein L3##X06323|MRPL3|11222|mitochondrial ribosomal protein L3##BC003375|MRPL3|11222|mitochondrial ribosomal protein L3##AK301377|MRPL3|11222|mitochondrial ribosomal protein L3##AK296626|MRPL3|11222|mitochondrial ribosomal protein L3##NM_007208|MRPL3|11222|mitochondrial ribosomal protein L3##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK000532|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##BC015593|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate	0.974278	CTCF.p2:-8:0.974
chr4	146478926	146479058	reg1002305.p1	15.520	+	U59912 NM_001003688 U54826 AK293055	-75034	+	TSC_hg19_v1_chr4_+_146403004 U59423 NM_005900 BC001878	-76110	+	AK302581 NM_001102653	-378180	-	TSC_hg19_v1_chr4_+_146540536 AK126662 NM_172250	61554	+	NM_001080531	122363	+	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	380685	-	U59912|SMAD1|4086|SMAD family member 1##NM_001003688|SMAD1|4086|SMAD family member 1##U54826|SMAD1|4086|SMAD family member 1##AK293055|SMAD1|4086|SMAD family member 1##U59423|SMAD1|4086|SMAD family member 1##NM_005900|SMAD1|4086|SMAD family member 1##BC001878|SMAD1|4086|SMAD family member 1##AK302581|OTUD4|54726|OTU domain containing 4##NM_001102653|OTUD4|54726|OTU domain containing 4##AK126662|MMAA|166785|methylmalonic aciduria (cobalamin deficiency) cblA type##NM_172250|MMAA|166785|methylmalonic aciduria (cobalamin deficiency) cblA type##NM_001080531|C4orf51|646603|chromosome 4 open reading frame 51##AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827	1.067538	CTCF.p2:-3:0.958
chr16	87943051	87943207	reg1001964.p2	15.518	+	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	-40054	-	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	-143559	-	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	-143614	-	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	27018	-	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	42039	+	AK315535 NM_001173542	50347	+	DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##BC001044|KLHDC4|54758|kelch domain containing 4##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein	0.963104	CTCF.p2:17:0.963
chr1	11702590	11702696	reg1001740.p1	15.517	+	TSC_hg19_v1_chr1_+_11539211 AB593117 AK311332 AB037758 NM_020780	-163408	+	TSC_hg19_v1_chr1_+_11333566 BC004468 BT006832	-369098	+	TSC_hg19_v1_chr1_+_11333254 AK222808 NM_013319 AK074890 AF117064	-369327	+	AB463629 CR542110 CU692940 DQ892848 DQ892849 DQ896095 TSC_hg19_v1_chr1_-_11714417	11763	-	AK055344 NM_183412	11788	+	BC025233 TSC_hg19_v1_chr1_-_11714487 AK313019 BC096747 BC014957	11845	-	AB593117|PTCHD2|57540|patched domain containing 2##AB037758|PTCHD2|57540|patched domain containing 2##NM_020780|PTCHD2|57540|patched domain containing 2##BC004468|UBIAD1|29914|UbiA prenyltransferase domain containing 1##BT006832|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK222808|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_013319|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK074890|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AF117064|UBIAD1|29914|UbiA prenyltransferase domain containing 1##CR542110|FBXO2|26232|F-box protein 2##DQ892848|FBXO2|26232|F-box protein 2##DQ892849|FBXO2|26232|F-box protein 2##DQ896095|FBXO2|26232|F-box protein 2##AK055344|FBXO44|93611|F-box protein 44##NM_183412|FBXO44|93611|F-box protein 44##BC025233|FBXO2|26232|F-box protein 2##AK313019|FBXO2|26232|F-box protein 2##BC096747|FBXO2|26232|F-box protein 2##BC014957|FBXO2|26232|F-box protein 2	0.941781	CTCF.p2:22:0.942
chr10	44882133	44882242	reg1001802.p1	15.516	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	-1688	-	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-737881	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-737982	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	524531	+	AK056518 TSC_hg19_v1_chr10_-_45455156	572960	-	TSC_hg19_v1_chr10_+_45455249 AY216713 AY216714 AY216715 AY216716 NM_032023 BC032593 AF260335 AK311531	573045	+	CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)##AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	0.999685	CTCF.p2:-2:1.000
chr1	233926969	233927089	reg1001541.p2	15.515	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-177110	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	-177206	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	-463446	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	113583	+	TSC_hg19_v1_chr1_+_234350005 BC037878	422977	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	582343	+	DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##BC037878|SLC35F3|148641|solute carrier family 35, member F3##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31	0.911566	CTCF.p2:5:0.912
chr14	72887575	72887699	reg1002349.p1	15.515	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-487771	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-488484	+	AK294895 NM_001204423	-488821	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	473171	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	505498	+	AK098542 AF311602 NM_178441	566020	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.137149	
chr12	50170251	50170371	reg1002273.p1	15.514	+	TSC_hg19_v1_chr12_+_50156978 AK026605	-13283	+	BC036203 TSC_hg19_v1_chr12_+_50135987	-34340	+	NM_001098576 AK124849	-34719	+	TSC_hg19_v1_chr12_-_50222197 NM_001037806	51888	-	CU690986 BC053560 BC040957 AK292194 NM_181708	66578	-	CU674012 AB463040 TSC_hg19_v1_chr12_-_50297671 AB023167 BC000051 AK290031 AF190461 NM_012306	127356	-	AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##BC036203|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##NM_001098576|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK124849|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##NM_001037806|NCKAP5L|57701|NCK-associated protein 5-like##BC053560|BCDIN3D|144233|BCDIN3 domain containing##BC040957|BCDIN3D|144233|BCDIN3 domain containing##AK292194|BCDIN3D|144233|BCDIN3 domain containing##NM_181708|BCDIN3D|144233|BCDIN3 domain containing##AB023167|FAIM2|23017|Fas apoptotic inhibitory molecule 2##BC000051|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AK290031|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AF190461|FAIM2|23017|Fas apoptotic inhibitory molecule 2##NM_012306|FAIM2|23017|Fas apoptotic inhibitory molecule 2	0.79869	CTCF.p2:0:0.319	CTCF.p2:55:0.405
chr19	30101615	30101757	reg1002179.p1	15.514	+	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	-4497	+	NM_001146339	-84196	+	TSC_hg19_v1_chr19_-_29704107 NM_006003	-397565	-	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	54663	+	TSC_hg19_v1_chr19_+_30156375 AK225814	54735	+	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	104406	-	NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12	0.999076	CTCF.p2:-17:0.999
chr15	78405683	78405808	reg1001547.p2	15.511	+	NM_001101404	-20819	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	-35792	-	TSC_hg19_v1_chr15_-_77924732 AK291363	-480965	-	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	18017	-	TSC_hg19_v1_chr15_+_78441718 AK299970 AK096721 AK296002 BC036227 NM_005530 AK315963 CR749548 BC021967 AK316051	35960	+	TSC_hg19_v1_chr15_+_78441734 AK222973	35989	+	NM_001101404|SH2D7|646892|SH2 domain containing 7##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2##AK299970|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK296002|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC036227|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##NM_005530|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK315963|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##CR749548|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC021967|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK316051|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK222973|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha	0.997055	CTCF.p2:0:0.997
chr7	25109718	25109829	reg1002156.p1	15.510	+	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	-90029	-	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-312176	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-312434	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	55104	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	55167	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	110098	-	AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31	0.986397	CTCF.p2:3:0.986
chr11	57261032	57261159	reg1002637.p1	15.509	+	TSC_hg19_v1_chr11_+_57228149 BC113673 BC117276 BC143818 AF532858 AX751514 AY250221 DQ864979 NM_178570	-32863	+	NM_017611	-66043	-	TSC_hg19_v1_chr11_-_57194592 AK075552 AK298028 AK315839 NM_199329	-66503	-	AF045584 TSC_hg19_v1_chr11_-_57282334 BC001639 NM_001198810	21241	-	TSC_hg19_v1_chr11_-_57283184 AB103033 NM_003627	22077	-	AK289751 BC032133 TSC_hg19_v1_chr11_-_57298210 AF150089 NM_012456	37110	-	BC113673|RTN4RL2|349667|reticulon 4 receptor-like 2##BC117276|RTN4RL2|349667|reticulon 4 receptor-like 2##BC143818|RTN4RL2|349667|reticulon 4 receptor-like 2##AF532858|RTN4RL2|349667|reticulon 4 receptor-like 2##AX751514|RTN4RL2|349667|reticulon 4 receptor-like 2##AY250221|RTN4RL2|349667|reticulon 4 receptor-like 2##DQ864979|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_178570|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_017611|SLC43A3|29015|solute carrier family 43, member 3##AK075552|SLC43A3|29015|solute carrier family 43, member 3##AK298028|SLC43A3|29015|solute carrier family 43, member 3##AK315839|SLC43A3|29015|solute carrier family 43, member 3##NM_199329|SLC43A3|29015|solute carrier family 43, member 3##AF045584|SLC43A1|8501|solute carrier family 43, member 1##BC001639|SLC43A1|8501|solute carrier family 43, member 1##NM_001198810|SLC43A1|8501|solute carrier family 43, member 1##AB103033|SLC43A1|8501|solute carrier family 43, member 1##NM_003627|SLC43A1|8501|solute carrier family 43, member 1##AK289751|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##BC032133|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##AF150089|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##NM_012456|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)	0.998039	CTCF.p2:-10:0.998
chr6	17156468	17156601	reg1002753.p1	15.509	+	NM_001190766	-54046	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	-394837	-	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-917683	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	125320	+	NM_001143941	125760	+	AK055391 NM_153020 BC104808 BC104810 BC040928	126470	+	NM_001190766|FLJ23152|401236|uncharacterized LOC401236##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24##NM_001143941|RBM24|221662|RNA binding motif protein 24##AK055391|RBM24|221662|RNA binding motif protein 24##NM_153020|RBM24|221662|RNA binding motif protein 24##BC104808|RBM24|221662|RNA binding motif protein 24##BC104810|RBM24|221662|RNA binding motif protein 24##BC040928|RBM24|221662|RNA binding motif protein 24	0.99983	CTCF.p2:-9:1.000
chr1	212244196	212244332	reg1002314.p1	15.508	+	TSC_hg19_v1_chr1_+_212209137 AF195765 AK299649 BC033297 AK027651 CU689622 CU689648 DQ641253	-35084	+	BC033540 TSC_hg19_v1_chr1_+_212209112 AF345896	-35146	+	NM_016448 AK292343 TSC_hg19_v1_chr1_+_212209090 AK000742 AK303346	-35250	+	TSC_hg19_v1_chr1_+_212458776 AK312530	214514	+	TSC_hg19_v1_chr1_+_212458867 L42373 NM_006243	214608	+	BC110883 TSC_hg19_v1_chr1_+_212459259	214950	+	AF195765|DTL|51514|denticleless homolog (Drosophila)##AK299649|DTL|51514|denticleless homolog (Drosophila)##BC033297|DTL|51514|denticleless homolog (Drosophila)##AK027651|DTL|51514|denticleless homolog (Drosophila)##DQ641253|DTL|51514|denticleless homolog (Drosophila)##BC033540|DTL|51514|denticleless homolog (Drosophila)##AF345896|DTL|51514|denticleless homolog (Drosophila)##NM_016448|DTL|51514|denticleless homolog (Drosophila)##AK292343|DTL|51514|denticleless homolog (Drosophila)##AK000742|DTL|51514|denticleless homolog (Drosophila)##AK303346|DTL|51514|denticleless homolog (Drosophila)##AK312530|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##L42373|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##NM_006243|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##BC110883|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha	0.997202	CTCF.p2:-18:0.997
chr10	97361011	97361151	reg1002926.p1	15.507	+	TSC_hg19_v1_chr10_-_97321129 AB037717 BC152463 AK022468 AK300407 AK304753 AL117472 AM260536 NM_015385 NM_024991	-39942	-	AM393082 NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_006434	-160166	-	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	-310299	-	TSC_hg19_v1_chr10_-_97416472 U68758 U76542 BC106054 AK225455 AK225465 AK226032 AK295487 X94453 AK299557 AK312271 BC117240 BC117242 BC143930	55356	-	TSC_hg19_v1_chr10_-_97416598 NM_001017423 NM_002860	55500	-	BC061582 TSC_hg19_v1_chr10_-_97453684 CU686635 AY359022 AL050022 AK299141 AK075357 AK098295	92565	-	AB037717|SORBS1|10580|sorbin and SH3 domain containing 1##BC152463|SORBS1|10580|sorbin and SH3 domain containing 1##AK022468|SORBS1|10580|sorbin and SH3 domain containing 1##AK300407|SORBS1|10580|sorbin and SH3 domain containing 1##AK304753|SORBS1|10580|sorbin and SH3 domain containing 1##AL117472|SORBS1|10580|sorbin and SH3 domain containing 1##AM260536|SORBS1|10580|sorbin and SH3 domain containing 1##NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1##NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1##AM393082|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1##NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1##AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1##U68758|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##U76542|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC106054|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK225455|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK225465|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK226032|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK295487|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##X94453|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK299557|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK312271|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC117240|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC117242|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC143930|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##NM_001017423|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##NM_002860|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC061582|TCTN3|26123|tectonic family member 3##AY359022|TCTN3|26123|tectonic family member 3##AL050022|TCTN3|26123|tectonic family member 3##AK299141|TCTN3|26123|tectonic family member 3##AK075357|TCTN3|26123|tectonic family member 3##AK098295|TCTN3|26123|tectonic family member 3	0.840142	CTCF.p2:1:0.840
chr17	2731844	2731978	reg1002747.p1	15.506	+	AJ628446 AJ628447 NM_001100398 NM_015085 TSC_hg19_v1_chr17_+_2699761 CR627427 BC140870 BC140871	-32158	+	AK124640 TSC_hg19_v1_chr17_+_2680496	-51488	+	NM_015229 TSC_hg19_v1_chr17_-_2615039	-116924	-	BC106876 NM_014566 AB529301	235016	-	AB529300 BC069552 BC106735 BC106736 NM_002548	264378	-	BC069379 NM_003555 BC095520 AB529303	298990	-	AJ628446|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AJ628447|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_001100398|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015085|RAP1GAP2|23108|RAP1 GTPase activating protein 2##CR627427|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140870|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140871|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AK124640|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015229|KIAA0664|23277|KIAA0664##BC106876|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##NM_014566|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1##NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1##BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	0.999631	CTCF.p2:-8:1.000
chr8	87797540	87797652	reg1002035.p1	15.506	+	BC150601 AF272900 NM_019098 DQ426865	-41684	-	AK292912 BC007017 BC008385 TSC_hg19_v1_chr8_+_87526694 BC066597 BC036242 AB014536 AF077226	-270885	+	TSC_hg19_v1_chr8_+_87526660 NM_003909	-270943	+	AK093121 AX747937 BC117326 BC117328 NM_173538	81077	+	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	1088663	-	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	1542150	-	BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3##AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3##NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3##AK292912|CPNE3|8895|copine III##BC007017|CPNE3|8895|copine III##BC008385|CPNE3|8895|copine III##BC066597|CPNE3|8895|copine III##BC036242|CPNE3|8895|copine III##AB014536|CPNE3|8895|copine III##AF077226|CPNE3|8895|copine III##NM_003909|CPNE3|8895|copine III##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)	0.0	
chr11	72436402	72436540	reg1002225.p1	15.503	+	AB018325 NM_001135190 NM_015242	-3081	-	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	-51018	-	AY495087 NM_001146209	-56364	-	TSC_hg19_v1_chr11_-_72463454 AY553630 NM_001040118	26995	-	AB209473 AK095668 BC035482 BC007919 BC014033 AK310301 AK315255 NM_006645	68225	-	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	88934	+	AB018325|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_001135190|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_015242|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY553630|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_001040118|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##AK095668|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC035482|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC007919|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC014033|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AK315255|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##NM_006645|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)	0.99141	CTCF.p2:-26:0.991
chr1	212629339	212629452	reg1001299.p2	15.502	+	TSC_hg19_v1_chr1_+_212606264 AF173937 NM_013349 AK074431 AK223135 AY762102 BC008823 AB126219 AF049672	-23083	+	TSC_hg19_v1_chr1_-_212588248 AK297200 NM_001198862 AK024066 NM_018252	-41143	-	TSC_hg19_v1_chr1_-_212588235 AK001736	-41160	-	NM_001030287	109280	+	NM_001040619 NM_001206484 NM_001206488 NM_001674 TSC_hg19_v1_chr1_+_212782102 AK294296	152640	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	152712	+	AF173937|NENF|29937|neudesin neurotrophic factor##NM_013349|NENF|29937|neudesin neurotrophic factor##AK074431|NENF|29937|neudesin neurotrophic factor##AK223135|NENF|29937|neudesin neurotrophic factor##AY762102|NENF|29937|neudesin neurotrophic factor##BC008823|NENF|29937|neudesin neurotrophic factor##AB126219|NENF|29937|neudesin neurotrophic factor##AF049672|NENF|29937|neudesin neurotrophic factor##AK297200|TMEM206|55248|transmembrane protein 206##NM_001198862|TMEM206|55248|transmembrane protein 206##AK024066|TMEM206|55248|transmembrane protein 206##NM_018252|TMEM206|55248|transmembrane protein 206##AK001736|TMEM206|55248|transmembrane protein 206##NM_001030287|ATF3|467|activating transcription factor 3##NM_001040619|ATF3|467|activating transcription factor 3##NM_001206484|ATF3|467|activating transcription factor 3##NM_001206488|ATF3|467|activating transcription factor 3##NM_001674|ATF3|467|activating transcription factor 3##AK294296|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3	0.999927	CTCF.p2:8:1.000
chr11	102261535	102261679	reg1002452.p1	15.501	+	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-43579	+	TSC_hg19_v1_chr11_+_102217944 AK303197	-43678	+	NM_001165 NM_182962 TSC_hg19_v1_chr11_+_102188214 AF070674	-73405	+	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	62006	-	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	139852	-	AB527354 NM_004771 Y12779	234448	-	BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##AK303197|BIRC2|329|baculoviral IAP repeat containing 2##NM_001165|BIRC3|330|baculoviral IAP repeat containing 3##NM_182962|BIRC3|330|baculoviral IAP repeat containing 3##AF070674|BIRC3|330|baculoviral IAP repeat containing 3##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20	0.87051	CTCF.p2:-4:0.752
chr2	77181012	77181135	reg1002270.p1	15.501	+	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-1243022	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-1243354	-	TSC_hg19_v1_chr2_+_75873908 NM_014763 AK295578 AK291250 BC030144 CU688824 AB463123 BC021051 D14660 DQ892303 DQ895502	-1307135	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	568345	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	2071765	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	2134060	-	BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_014763|MRPL19|9801|mitochondrial ribosomal protein L19##AK295578|MRPL19|9801|mitochondrial ribosomal protein L19##AK291250|MRPL19|9801|mitochondrial ribosomal protein L19##BC030144|MRPL19|9801|mitochondrial ribosomal protein L19##BC021051|MRPL19|9801|mitochondrial ribosomal protein L19##D14660|MRPL19|9801|mitochondrial ribosomal protein L19##DQ892303|MRPL19|9801|mitochondrial ribosomal protein L19##DQ895502|MRPL19|9801|mitochondrial ribosomal protein L19##BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta	0.0	
chr19	14306970	14307108	reg1002609.p1	15.500	+	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	-46239	-	TSC_hg19_v1_chr19_+_14247979 BX537706	-59048	+	AK302134 TSC_hg19_v1_chr19_-_14247402 BC036521 AK001466 NM_018154	-59617	-	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	10009	-	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	185010	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	185216	+	BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##AK302134|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC036521|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK001466|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##NM_018154|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule	0.975651	CTCF.p2:-6:0.976
chr5	34523357	34523481	reg1001353.p1	15.500	+	EU399231 EU399232 BC112925 AF329837 BC120990 AF326976 AY358388 AK075533 BX640995 AK315921 AK295968 NM_030945 NM_181435	-480117	-	TSC_hg19_v1_chr5_-_34008240 AK225749	-515175	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	-515256	-	TSC_hg19_v1_chr5_+_34656432 NM_001145522 NM_015577	132994	+	TSC_hg19_v1_chr5_+_34656506 BC052988 AF155135 AK314379	133093	+	AB037755 NM_001145520 TSC_hg19_v1_chr5_+_34656599	133178	+	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK225749|AMACR|23600|alpha-methylacyl-CoA racemase##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001145522|RAI14|26064|retinoic acid induced 14##NM_015577|RAI14|26064|retinoic acid induced 14##BC052988|RAI14|26064|retinoic acid induced 14##AF155135|RAI14|26064|retinoic acid induced 14##AK314379|RAI14|26064|retinoic acid induced 14##AB037755|RAI14|26064|retinoic acid induced 14##NM_001145520|RAI14|26064|retinoic acid induced 14	0.987191	CTCF.p2:0:0.987
chr16	11012697	11012840	reg1002019.p1	15.499	+	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	-41656	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	-100220	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-175064	+	BC071683 TSC_hg19_v1_chr16_-_11036171	23398	-	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	23467	-	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	25675	+	AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##BC071683|DEXI|28955|Dexi homolog (mouse)##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A	0.996484	CTCF.p2:22:0.996
chr6	52027873	52027985	reg1001426.p1	15.498	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	-75534	-	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-1241394	+	AY028376 NM_172238	-1346673	+	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	23277	+	AF384857 JF305974 AB590713 BC070124 NM_052872	81332	-	AB528319 DQ893654 DQ895840 TSC_hg19_v1_chr6_-_52149506 AK312928 AK300754 X62153 AY032603	121562	-	AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F##DQ893654|MCM3|4172|minichromosome maintenance complex component 3##DQ895840|MCM3|4172|minichromosome maintenance complex component 3##AK312928|MCM3|4172|minichromosome maintenance complex component 3##AK300754|MCM3|4172|minichromosome maintenance complex component 3##X62153|MCM3|4172|minichromosome maintenance complex component 3##AY032603|MCM3|4172|minichromosome maintenance complex component 3	0.971294	CTCF.p2:-5:0.971
chr7	100702724	100702852	reg1002288.p1	15.498	+	TSC_hg19_v1_chr7_+_100663360 AJ606307 AJ606308 NM_001040105	-39423	+	NM_001164462	-89885	+	AK130455 TSC_hg19_v1_chr7_+_100612694	-90095	+	BC005847 TSC_hg19_v1_chr7_+_100728767 AK092927 AX747810 BC048194 NM_030961 BC011882	25972	+	NM_000602 NM_001165413 TSC_hg19_v1_chr7_+_100770384 AK293248 AK297728 AK298048 AK316225 BC020765 X04729 BC010860 X04429 X12701 BC005927 M16006	67626	+	NM_001283 TSC_hg19_v1_chr7_+_100797756 AK312151 BC003561 AB015319	94940	+	AJ606307|MUC17|140453|mucin 17, cell surface associated##AJ606308|MUC17|140453|mucin 17, cell surface associated##NM_001040105|MUC17|140453|mucin 17, cell surface associated##NM_001164462|MUC12|10071|mucin 12, cell surface associated##BC005847|TRIM56|81844|tripartite motif containing 56##BC048194|TRIM56|81844|tripartite motif containing 56##NM_030961|TRIM56|81844|tripartite motif containing 56##BC011882|TRIM56|81844|tripartite motif containing 56##NM_000602|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001165413|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK293248|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK297728|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK298048|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK316225|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC020765|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04729|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC010860|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04429|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X12701|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC005927|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##M16006|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001283|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AK312151|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC003561|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AB015319|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit	0.994931	CTCF.p2:5:0.995
chr1	59205670	59205786	reg1001384.p1	15.497	+	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-39976	-	TSC_hg19_v1_chr1_-_59147727 BC017579	-57982	-	NM_002353	-162563	-	TSC_hg19_v1_chr1_-_59248287 BC009874	42637	-	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	44007	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	556884	+	BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_002353|TACSTD2|4070|tumor-associated calcium signal transducer 2##BC009874|JUN|3725|jun proto-oncogene##BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing	0.999633	CTCF.p2:-11:1.000
chr12	12857629	12857793	reg1001786.p1	15.496	+	AK096388 NM_006143	-8591	-	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	-92828	+	TSC_hg19_v1_chr12_+_12764831 BC106052 AF039081 NM_001310 AK307202	-92916	+	TSC_hg19_v1_chr12_+_12870308 AK312461 NM_004064 BC001971 AK298335	12415	+	TSC_hg19_v1_chr12_+_12878853 NM_001130415 AK127712 BC042478 AM393383	21145	+	BC126433 BC126435 NM_030817 TSC_hg19_v1_chr12_+_12938594 AK057867 AK225176 AK314392 AL136783	80866	+	AK096388|GPR19|2842|G protein-coupled receptor 19##NM_006143|GPR19|2842|G protein-coupled receptor 19##BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2##BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2##AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2##AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2##AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_001130415|APOLD1|81575|apolipoprotein L domain containing 1##BC042478|APOLD1|81575|apolipoprotein L domain containing 1##AM393383|APOLD1|81575|apolipoprotein L domain containing 1##BC126433|APOLD1|81575|apolipoprotein L domain containing 1##BC126435|APOLD1|81575|apolipoprotein L domain containing 1##NM_030817|APOLD1|81575|apolipoprotein L domain containing 1##AK225176|APOLD1|81575|apolipoprotein L domain containing 1##AK314392|APOLD1|81575|apolipoprotein L domain containing 1##AL136783|APOLD1|81575|apolipoprotein L domain containing 1	0.089497	
chr12	65284796	65284938	reg1001781.p2	15.496	+	AB527171 TSC_hg19_v1_chr12_+_65224283	-60619	+	TSC_hg19_v1_chr12_+_65218446 AK299508	-66423	+	NM_015279 TSC_hg19_v1_chr12_+_65218409 AK055404	-66484	+	DQ892394 DQ895609 TSC_hg19_v1_chr12_-_65514986	230123	-	BX647427 TSC_hg19_v1_chr12_-_65515016	230152	-	TSC_hg19_v1_chr12_-_65515107 AF122922 BC018037 AY358344	230218	-	AK299508|TBC1D30|23329|TBC1 domain family, member 30##NM_015279|TBC1D30|23329|TBC1 domain family, member 30##AK055404|TBC1D30|23329|TBC1 domain family, member 30##DQ892394|WIF1|11197|WNT inhibitory factor 1##DQ895609|WIF1|11197|WNT inhibitory factor 1##BX647427|WIF1|11197|WNT inhibitory factor 1##AF122922|WIF1|11197|WNT inhibitory factor 1##BC018037|WIF1|11197|WNT inhibitory factor 1##AY358344|WIF1|11197|WNT inhibitory factor 1	0.991091	CTCF.p2:-17:0.991
chr12	93790662	93790791	reg1002184.p1	15.496	+	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	-18834	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-467628	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-467683	-	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	44960	-	TSC_hg19_v1_chr12_-_93835718 D83004	44992	-	TSC_hg19_v1_chr12_-_93835724 BC000396	45012	-	NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC000396|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.898217	CTCF.p2:3:0.898
chr22	36697463	36697592	reg1002575.p1	15.494	+	D11393 TSC_hg19_v1_chr22_-_36697021	-513	-	BC011915 TSC_hg19_v1_chr22_-_36681760	-15764	-	TSC_hg19_v1_chr22_+_36649178 AF305224 AK303919 AK313752 AK298053 BC113867 BC114475 BC127186 BC143038 BC143039 BC017331 AK296099	-48338	+	TSC_hg19_v1_chr22_-_36783906 AB290175 CR456526	86359	-	TSC_hg19_v1_chr22_-_36783943 M81105	86425	-	AK131080 TSC_hg19_v1_chr22_-_36783982 BC049849	86452	-	D11393|MYH9|4627|myosin, heavy chain 9, non-muscle##BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle##AF305224|APOL1|8542|apolipoprotein L, 1##AK303919|APOL1|8542|apolipoprotein L, 1##AK313752|APOL1|8542|apolipoprotein L, 1##AK298053|APOL1|8542|apolipoprotein L, 1##BC113867|APOL1|8542|apolipoprotein L, 1##BC114475|APOL1|8542|apolipoprotein L, 1##BC127186|APOL1|8542|apolipoprotein L, 1##BC143038|APOL1|8542|apolipoprotein L, 1##BC143039|APOL1|8542|apolipoprotein L, 1##BC017331|APOL1|8542|apolipoprotein L, 1##AK296099|APOL1|8542|apolipoprotein L, 1##AB290175|MYH9|4627|myosin, heavy chain 9, non-muscle##CR456526|MYH9|4627|myosin, heavy chain 9, non-muscle##M81105|MYH9|4627|myosin, heavy chain 9, non-muscle##AK131080|MYH9|4627|myosin, heavy chain 9, non-muscle##BC049849|MYH9|4627|myosin, heavy chain 9, non-muscle	0.999942	CTCF.p2:-2:1.000
chr5	1168372	1168511	reg1003012.p2	15.493	+	CU675797 AF105365 TSC_hg19_v1_chr5_-_1112151 AK302856 BC098390 BC007760 BC018982 NM_006598	-56284	-	TSC_hg19_v1_chr5_+_1008916 BC012176 AF358137 AB062887 NM_033120	-159408	+	TSC_hg19_v1_chr5_-_997422 AK126199 NM_001242737	-171006	-	AK096054 AK290811 NM_001003841 BC146290 BC148801 AB527217 AY591756 AY596807	33296	+	AK055798 NM_182632 AK298257 BC056757	57049	+	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	126650	-	AF105365|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK302856|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC098390|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC007760|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC018982|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##NM_006598|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC012176|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF358137|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AB062887|NKD2|85409|naked cuticle homolog 2 (Drosophila)##NM_033120|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AK126199|LOC100506688|100506688|uncharacterized LOC100506688##NM_001242737|LOC100506688|100506688|uncharacterized LOC100506688##AK096054|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK290811|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##NM_001003841|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC146290|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC148801|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY591756|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY596807|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK055798|SLC6A18|348932|solute carrier family 6, member 18##NM_182632|SLC6A18|348932|solute carrier family 6, member 18##AK298257|SLC6A18|348932|solute carrier family 6, member 18##BC056757|SLC6A18|348932|solute carrier family 6, member 18##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase	0.903783	CTCF.p2:0:0.904
chr10	79597477	79597621	reg1001829.p2	15.491	+	BC009695 AK098326 TSC_hg19_v1_chr10_-_79397567 BC062659 BC024965 NM_001014797 NM_001161352 NM_001161353 NM_002247	-199986	-	U13913 BC137115 BC137137 BC144496 CR627384 TSC_hg19_v1_chr10_-_79397499	-200063	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	-200143	-	TSC_hg19_v1_chr10_-_79628871 BC117695	31360	-	AB384502 NM_004747 AB011155 BC146794 TSC_hg19_v1_chr10_-_79686514	88853	-	AF021351 AY091459 AB384941 TSC_hg19_v1_chr10_-_79789272 BC041089 AK300329	191672	-	BC009695|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC062659|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC024965|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001014797|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161352|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161353|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_002247|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)##NM_004747|DLG5|9231|discs, large homolog 5 (Drosophila)##AB011155|DLG5|9231|discs, large homolog 5 (Drosophila)##BC146794|DLG5|9231|discs, large homolog 5 (Drosophila)##AF021351|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AY091459|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC041089|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AK300329|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa	0.194589	
chr17	74519304	74519421	reg1001618.p1	15.491	+	TSC_hg19_v1_chr17_-_74497506 BC016034 AK292135 NM_024599	-21903	-	AK303434 AY500247 AK292166 NM_001005498	-35464	-	NM_001088 U40347 AB593119 BC069434	-55705	+	AJ315162 AK098057 BC029798 AB057769 BC018822 NM_134268	14340	-	DQ390338 NM_001077620 BC146898 BC146904	16784	+	TSC_hg19_v1_chr17_+_74553850 AK123993 AK129904 AB073602 BC042949 AK055935 BX647993 BC100293	34517	+	BC016034|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292135|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_024599|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK303434|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AY500247|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292166|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001005498|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001088|AANAT|15|aralkylamine N-acetyltransferase##U40347|AANAT|15|aralkylamine N-acetyltransferase##AB593119|AANAT|15|aralkylamine N-acetyltransferase##BC069434|AANAT|15|aralkylamine N-acetyltransferase##AJ315162|CYGB|114757|cytoglobin##AK098057|CYGB|114757|cytoglobin##BC029798|CYGB|114757|cytoglobin##AB057769|CYGB|114757|cytoglobin##NM_134268|CYGB|114757|cytoglobin##DQ390338|PRCD|768206|progressive rod-cone degeneration##NM_001077620|PRCD|768206|progressive rod-cone degeneration##BC146898|PRCD|768206|progressive rod-cone degeneration##BC146904|PRCD|768206|progressive rod-cone degeneration##BC042949|LOC100507246|100507246|uncharacterized LOC100507246##BX647993|LOC100507246|100507246|uncharacterized LOC100507246##BC100293|LOC100507246|100507246|uncharacterized LOC100507246	0.928954	CTCF.p2:-7:0.929
chr19	6863694	6863818	reg1001549.p3	15.490	+	TSC_hg19_v1_chr19_+_6772811 AB590871	-90948	+	TSC_hg19_v1_chr19_+_6772718 NM_005428 AK225710 AK313307	-91032	+	TSC_hg19_v1_chr19_-_6767447 AK225386 AK292781 AK299406 AK310659 BC006281 AF124249 AY358406 NM_005490 AK290293	-96249	-	BC059395 NM_001974 X81479 AK297003 AK131562 AK290401 AK291518 AK313495 AK297011 CU687372	23841	+	NM_001136507	166837	+	NM_001164419	176427	-	NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225386|SH2D3A|10045|SH2 domain containing 3A##AK292781|SH2D3A|10045|SH2 domain containing 3A##AK299406|SH2D3A|10045|SH2 domain containing 3A##AK310659|SH2D3A|10045|SH2 domain containing 3A##BC006281|SH2D3A|10045|SH2 domain containing 3A##AF124249|SH2D3A|10045|SH2 domain containing 3A##AY358406|SH2D3A|10045|SH2 domain containing 3A##NM_005490|SH2D3A|10045|SH2 domain containing 3A##AK290293|SH2D3A|10045|SH2 domain containing 3A##BC059395|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_001974|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##X81479|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297003|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK131562|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK290401|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK291518|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK313495|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297011|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_001136507|MBD3L5|284428|methyl-CpG binding domain protein 3-like 5##NM_001164419|MBD3L4|653656|methyl-CpG binding domain protein 3-like 4	0.999851	CTCF.p2:11:1.000
chr10	27649625	27649737	reg1001580.p2	15.488	+	TSC_hg19_v1_chr10_-_27531041 AK057469 AF505653 NM_001042473	-118599	-	TSC_hg19_v1_chr10_-_27531030 AB082527	-118666	-	TSC_hg19_v1_chr10_-_27529416 CU688904 AK295031 AK304842 BC025309 BC030555 BC011364 AK294510 NM_145698	-120137	-	JF332167 BC107139 AK126025 NM_001034842	53556	-	TSC_hg19_v1_chr10_+_27793232 AY574034 AK295443 AK297629 AK299457 BC029350 AF087860 BC015014 NM_021252 AL136734 AK223153 AB464117 AF137372 AF498950 AK001555 AM393142 BT009840 CR533455 CU677165	143548	+	BC036207 TSC_hg19_v1_chr10_-_28034752 AK125339 NM_001242702 NM_173576	385080	-	AK057469|ACBD5|91452|acyl-CoA binding domain containing 5##AF505653|ACBD5|91452|acyl-CoA binding domain containing 5##NM_001042473|ACBD5|91452|acyl-CoA binding domain containing 5##AB082527|ACBD5|91452|acyl-CoA binding domain containing 5##AK295031|ACBD5|91452|acyl-CoA binding domain containing 5##AK304842|ACBD5|91452|acyl-CoA binding domain containing 5##BC025309|ACBD5|91452|acyl-CoA binding domain containing 5##BC030555|ACBD5|91452|acyl-CoA binding domain containing 5##BC011364|ACBD5|91452|acyl-CoA binding domain containing 5##AK294510|ACBD5|91452|acyl-CoA binding domain containing 5##NM_145698|ACBD5|91452|acyl-CoA binding domain containing 5##JF332167|PTCHD3|374308|patched domain containing 3##BC107139|PTCHD3|374308|patched domain containing 3##AK126025|PTCHD3|374308|patched domain containing 3##NM_001034842|PTCHD3|374308|patched domain containing 3##AY574034|RAB18|22931|RAB18, member RAS oncogene family##AK295443|RAB18|22931|RAB18, member RAS oncogene family##AK297629|RAB18|22931|RAB18, member RAS oncogene family##AK299457|RAB18|22931|RAB18, member RAS oncogene family##BC029350|RAB18|22931|RAB18, member RAS oncogene family##AF087860|RAB18|22931|RAB18, member RAS oncogene family##BC015014|RAB18|22931|RAB18, member RAS oncogene family##NM_021252|RAB18|22931|RAB18, member RAS oncogene family##AL136734|RAB18|22931|RAB18, member RAS oncogene family##AK223153|RAB18|22931|RAB18, member RAS oncogene family##AF137372|RAB18|22931|RAB18, member RAS oncogene family##AF498950|RAB18|22931|RAB18, member RAS oncogene family##AK001555|RAB18|22931|RAB18, member RAS oncogene family##AM393142|RAB18|22931|RAB18, member RAS oncogene family##BT009840|RAB18|22931|RAB18, member RAS oncogene family##CR533455|RAB18|22931|RAB18, member RAS oncogene family##BC036207|MKX|283078|mohawk homeobox##AK125339|MKX|283078|mohawk homeobox##NM_001242702|MKX|283078|mohawk homeobox##NM_173576|MKX|283078|mohawk homeobox	0.999501	CTCF.p2:13:1.000
chr17	6376583	6376722	reg1002280.p1	15.488	+	TSC_hg19_v1_chr17_+_6347774 NM_001195228 NM_019013 BC005004 AK225613 AK001353 AK225702 BC013966 AK001018	-28889	+	DQ892260 DQ895462 AB593054 BC007994 BC012055 AF038437 AB593047 AB593042 AB593043 AB593050 AB593052 AK314558 AB593051 AK023970 AB593048 BX537907 AB593044 AB593045 AB593046 AB593049 AJ633677 AJ633678 AJ830742 AJ830743 AB593053 AB593055 BX647279 AF525970 NM_001033054 NM_001033055 NM_014336 DQ426860	-38149	-	TSC_hg19_v1_chr17_+_5974408 BC009975	-402235	+	TSC_hg19_v1_chr17_-_6459873 BC035799 BC128583 BC128584 AF334586 NM_001165966 NM_031220	83178	-	TSC_hg19_v1_chr17_-_6543982 AB018296 BC017566 AK292876	167346	-	TSC_hg19_v1_chr17_-_6544032 AK296971	167378	-	NM_001195228|FAM64A|54478|family with sequence similarity 64, member A##NM_019013|FAM64A|54478|family with sequence similarity 64, member A##BC005004|FAM64A|54478|family with sequence similarity 64, member A##AK225613|FAM64A|54478|family with sequence similarity 64, member A##AK001353|FAM64A|54478|family with sequence similarity 64, member A##AK225702|FAM64A|54478|family with sequence similarity 64, member A##BC013966|FAM64A|54478|family with sequence similarity 64, member A##AK001018|FAM64A|54478|family with sequence similarity 64, member A##DQ892260|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##DQ895462|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593054|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BC007994|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BC012055|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AF038437|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593047|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593042|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593043|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593050|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593052|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AK314558|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593051|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AK023970|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593048|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BX537907|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593044|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593045|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593046|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593049|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ633677|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ633678|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ830742|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ830743|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593053|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593055|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BX647279|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AF525970|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_001033054|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_001033055|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_014336|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BC009975|WSCD1|23302|WSC domain containing 1##BC035799|PITPNM3|83394|PITPNM family member 3##BC128583|PITPNM3|83394|PITPNM family member 3##BC128584|PITPNM3|83394|PITPNM family member 3##AF334586|PITPNM3|83394|PITPNM family member 3##NM_001165966|PITPNM3|83394|PITPNM family member 3##NM_031220|PITPNM3|83394|PITPNM family member 3##AB018296|KIAA0753|9851|KIAA0753##BC017566|KIAA0753|9851|KIAA0753##AK292876|KIAA0753|9851|KIAA0753##AK296971|KIAA0753|9851|KIAA0753	0.694133	CTCF.p2:-2:0.694
chr11	46559496	46559615	reg1001716.p2	15.487	+	BC119775 BC119817 AF385590 AF498918 NM_000741 BC095546 BC137535	-151424	-	NM_001012333 TSC_hg19_v1_chr11_+_46403310	-156249	+	TSC_hg19_v1_chr11_+_46403285 X55110	-156268	+	BC045609 NM_017749 AK302808	53387	-	AL834190 TSC_hg19_v1_chr11_-_46615568 AK057896 AK000301 AB051523	55980	-	AK304530 TSC_hg19_v1_chr11_-_46615589	56048	-	BC119775|CHRM4|1132|cholinergic receptor, muscarinic 4##BC119817|CHRM4|1132|cholinergic receptor, muscarinic 4##AF385590|CHRM4|1132|cholinergic receptor, muscarinic 4##AF498918|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_000741|CHRM4|1132|cholinergic receptor, muscarinic 4##BC095546|CHRM4|1132|cholinergic receptor, muscarinic 4##BC137535|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_001012333|MDK|4192|midkine (neurite growth-promoting factor 2)##X55110|MDK|4192|midkine (neurite growth-promoting factor 2)##BC045609|AMBRA1|55626|autophagy/beclin-1 regulator 1##NM_017749|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK302808|AMBRA1|55626|autophagy/beclin-1 regulator 1##AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1##AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1	0.966614	CTCF.p2:14:0.967
chr10	116063827	116063939	reg1001398.p1	15.482	+	TSC_hg19_v1_chr10_+_115999012 AK122716 NM_198496 AJ536328 AJ616914 BC128588 AY572972 BC143380	-64724	+	AK122916 AL833340 NM_198795 BX648664 BC063133	-124812	+	NM_018017	-129520	-	AK123108 BC033212 AK027470 TSC_hg19_v1_chr10_-_116164254 AK294969 AK291712 AF474151	100359	-	BC024314 NM_001001936 NM_032550	100631	-	CU677968 TSC_hg19_v1_chr10_-_116251632	187724	-	AK122716|VWA2|340706|von Willebrand factor A domain containing 2##NM_198496|VWA2|340706|von Willebrand factor A domain containing 2##AJ536328|VWA2|340706|von Willebrand factor A domain containing 2##AJ616914|VWA2|340706|von Willebrand factor A domain containing 2##BC128588|VWA2|340706|von Willebrand factor A domain containing 2##AY572972|VWA2|340706|von Willebrand factor A domain containing 2##BC143380|VWA2|340706|von Willebrand factor A domain containing 2##AK122916|TDRD1|56165|tudor domain containing 1##AL833340|TDRD1|56165|tudor domain containing 1##NM_198795|TDRD1|56165|tudor domain containing 1##BX648664|TDRD1|56165|tudor domain containing 1##BC063133|TDRD1|56165|tudor domain containing 1##NM_018017|C10orf118|55088|chromosome 10 open reading frame 118##AK123108|AFAP1L2|84632|actin filament associated protein 1-like 2##BC033212|AFAP1L2|84632|actin filament associated protein 1-like 2##AK294969|AFAP1L2|84632|actin filament associated protein 1-like 2##AK291712|AFAP1L2|84632|actin filament associated protein 1-like 2##AF474151|AFAP1L2|84632|actin filament associated protein 1-like 2##BC024314|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_001001936|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_032550|AFAP1L2|84632|actin filament associated protein 1-like 2	0.999175	CTCF.p2:-4:0.999
chr10	95048924	95049061	reg1002730.p1	15.482	+	AK075374 NM_000783 AF005418	-215336	+	AK027560 NM_057157	-215761	+	AY356349 NM_183374	-227972	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	193056	-	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	207396	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	277517	+	AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1	0.999181	CTCF.p2:-2:0.999
chr6	111003686	111003818	reg1001548.p2	15.482	+	TSC_hg19_v1_chr6_-_110797837 BC047565 NM_033125	-205889	-	TSC_hg19_v1_chr6_-_110797817 AK304546	-205934	-	BC012014 AF268892 AY145502 BC037247 TSC_hg19_v1_chr6_-_110797794	-205964	-	AK304351 TSC_hg19_v1_chr6_+_111135843	132081	+	BC047513 TSC_hg19_v1_chr6_-_111136246	132466	-	AJ420571 TSC_hg19_v1_chr6_-_111136300	132547	-	BC047565|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##NM_033125|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304546|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC012014|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AF268892|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AY145502|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC037247|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304351|AMD1|262|adenosylmethionine decarboxylase 1##BC047513|CDK19|23097|cyclin-dependent kinase 19##AJ420571|CDK19|23097|cyclin-dependent kinase 19	0.998589	CTCF.p2:-23:0.999
chr12	131400880	131400988	reg1001200.p1	15.480	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-44223	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-44309	+	TSC_hg19_v1_chr12_+_131356615 AF054183 AK311223 AK316193 AK312466 BC000852 NM_006325	-44348	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	37519	+	TSC_hg19_v1_chr12_+_132195623 BC142980	794679	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	794722	+	BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##AF054183|RAN|5901|RAN, member RAS oncogene family##AK316193|RAN|5901|RAN, member RAS oncogene family##AK312466|RAN|5901|RAN, member RAS oncogene family##BC000852|RAN|5901|RAN, member RAS oncogene family##NM_006325|RAN|5901|RAN, member RAS oncogene family##BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)	0.0	
chr14	81421200	81421329	reg1002372.p1	15.480	+	BC045834 AK309833 TSC_hg19_v1_chr14_-_81408073	-13206	-	NM_152446	-15381	-	AK292210 NM_000793	-723868	-	AK303378 BC024205 NM_000369 NM_001018036 NM_001142626 M31774 BC108653 BC009237 M73747 M32215 BC063613 AB209207 BC120972 BC120973 BC127628 BC127629 BC141970 S49816 AB384880 AY429111 CU687778 S45272	602	+	D14887 TSC_hg19_v1_chr14_-_81687285 NM_015859 BC050703	266016	-	D14886 NM_201595	266310	-	BC045834|CEP128|145508|centrosomal protein 128kDa##AK309833|CEP128|145508|centrosomal protein 128kDa##NM_152446|CEP128|145508|centrosomal protein 128kDa##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II##BC024205|TSHR|7253|thyroid stimulating hormone receptor##NM_000369|TSHR|7253|thyroid stimulating hormone receptor##NM_001018036|TSHR|7253|thyroid stimulating hormone receptor##NM_001142626|TSHR|7253|thyroid stimulating hormone receptor##M31774|TSHR|7253|thyroid stimulating hormone receptor##BC108653|TSHR|7253|thyroid stimulating hormone receptor##BC009237|TSHR|7253|thyroid stimulating hormone receptor##M73747|TSHR|7253|thyroid stimulating hormone receptor##M32215|TSHR|7253|thyroid stimulating hormone receptor##BC063613|TSHR|7253|thyroid stimulating hormone receptor##AB209207|TSHR|7253|thyroid stimulating hormone receptor##BC120972|TSHR|7253|thyroid stimulating hormone receptor##BC120973|TSHR|7253|thyroid stimulating hormone receptor##BC127628|TSHR|7253|thyroid stimulating hormone receptor##BC127629|TSHR|7253|thyroid stimulating hormone receptor##BC141970|TSHR|7253|thyroid stimulating hormone receptor##S49816|TSHR|7253|thyroid stimulating hormone receptor##AY429111|TSHR|7253|thyroid stimulating hormone receptor##S45272|TSHR|7253|thyroid stimulating hormone receptor##D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##D14886|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_201595|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa	0.879061	CTCF.p2:-1:0.838
chr3	46599901	46600025	reg1001451.p2	15.477	+	AJ312776 NM_031440 BC131756 AY562237	-60445	+	M83205 X52941 AF332168 AY137470 AY178998 AY875691 DQ522304 EU779935 AB527812 AY360320 DQ892855 DQ896102 M83202 M93150 AY165046 AK290859 AK292813 AK303889 BC015822 BC022347 BC015823 AY493417 NM_002343 X53961	-93466	-	AK316330 U84119 AK298035 NM_001199149	-94845	-	NM_024512	8076	-	NM_001174136	16081	+	NM_003212 X14253 BC022393 BC067844 AK313319 AB590665 CU688358 CU692602 EU832709	19304	+	AJ312776|RTP3|83597|receptor (chemosensory) transporter protein 3##NM_031440|RTP3|83597|receptor (chemosensory) transporter protein 3##BC131756|RTP3|83597|receptor (chemosensory) transporter protein 3##AY562237|RTP3|83597|receptor (chemosensory) transporter protein 3##M83205|LTF|4057|lactotransferrin##X52941|LTF|4057|lactotransferrin##AF332168|LTF|4057|lactotransferrin##AY137470|LTF|4057|lactotransferrin##AY178998|LTF|4057|lactotransferrin##AY875691|LTF|4057|lactotransferrin##DQ522304|LTF|4057|lactotransferrin##EU779935|LTF|4057|lactotransferrin##AY360320|LTF|4057|lactotransferrin##DQ892855|LTF|4057|lactotransferrin##DQ896102|LTF|4057|lactotransferrin##M83202|LTF|4057|lactotransferrin##M93150|LTF|4057|lactotransferrin##AY165046|LTF|4057|lactotransferrin##AK290859|LTF|4057|lactotransferrin##AK292813|LTF|4057|lactotransferrin##AK303889|LTF|4057|lactotransferrin##BC015822|LTF|4057|lactotransferrin##BC022347|LTF|4057|lactotransferrin##BC015823|LTF|4057|lactotransferrin##AY493417|LTF|4057|lactotransferrin##NM_002343|LTF|4057|lactotransferrin##X53961|LTF|4057|lactotransferrin##AK316330|LTF|4057|lactotransferrin##U84119|LTF|4057|lactotransferrin##AK298035|LTF|4057|lactotransferrin##NM_001199149|LTF|4057|lactotransferrin##NM_024512|LRRC2|79442|leucine rich repeat containing 2##NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1##NM_003212|TDGF1|6997|teratocarcinoma-derived growth factor 1##X14253|TDGF1|6997|teratocarcinoma-derived growth factor 1##BC022393|TDGF1|6997|teratocarcinoma-derived growth factor 1##BC067844|TDGF1|6997|teratocarcinoma-derived growth factor 1##AK313319|TDGF1|6997|teratocarcinoma-derived growth factor 1##EU832709|TDGF1|6997|teratocarcinoma-derived growth factor 1	0.224143	CTCF.p2:8:0.224
chr1	66719147	66719271	reg1001912.p1	15.474	+	AB209081 NM_001037340 AK290006	-260806	+	AK289969 NM_002600 L20966	-460350	+	NM_001037341 CR749667 BC071607 BC036108	-461014	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	78644	+	TSC_hg19_v1_chr1_+_66798096 AK294441	78886	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	280675	+	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK289969|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_002600|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L20966|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037341|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##CR749667|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC071607|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC036108|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	0.13061	
chr19	56592076	56592175	reg1001348.p1	15.472	+	AB527195 AY054986 AY154460 NM_153447	-81035	+	NM_176811 AB527377 AY154463	-132893	+	AB527194 AY154468 NM_176810	-148437	-	TSC_hg19_v1_chr19_-_56632629 BC037737	40489	-	TSC_hg19_v1_chr19_-_56632646 BC012495 BC077728 NM_001002836	40521	-	TSC_hg19_v1_chr19_+_56652664 NM_001253792 NM_018337 AL834130 AK223408	60480	+	AY054986|NLRP5|126206|NLR family, pyrin domain containing 5##AY154460|NLRP5|126206|NLR family, pyrin domain containing 5##NM_153447|NLRP5|126206|NLR family, pyrin domain containing 5##NM_176811|NLRP8|126205|NLR family, pyrin domain containing 8##AY154463|NLRP8|126205|NLR family, pyrin domain containing 8##AY154468|NLRP13|126204|NLR family, pyrin domain containing 13##NM_176810|NLRP13|126204|NLR family, pyrin domain containing 13##BC037737|ZNF787|126208|zinc finger protein 787##BC012495|ZNF787|126208|zinc finger protein 787##BC077728|ZNF787|126208|zinc finger protein 787##NM_001002836|ZNF787|126208|zinc finger protein 787##NM_001253792|ZNF444|55311|zinc finger protein 444##NM_018337|ZNF444|55311|zinc finger protein 444##AL834130|ZNF444|55311|zinc finger protein 444##AK223408|ZNF444|55311|zinc finger protein 444	0.99545	CTCF.p2:-22:0.995
chr9	69652247	69652377	reg1002512.p1	15.471	+	AL136793 NM_001098805	-270332	+	AF265442 BC069006 AK293173 NM_001085457	-389758	-	NM_001085476	-450109	-	NM_001126334	526502	-	NM_001099279 NM_199244	777418	-	CU688346 TSC_hg19_v1_chr9_-_70490092	837769	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.92769	CTCF.p2:-10:0.928
chr14	39938686	39938802	reg1001748.p1	15.470	+	BC053537 BC068566 BC030611 NM_203301	-37083	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-37387	-	TSC_hg19_v1_chr14_+_39736592 BC039017 AK315254 BC029513 BC051363 U73682	-202171	+	NM_152447 AK096627	2138023	+	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	5037731	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	5427754	+	BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##BC039017|CTAGE5|4253|CTAGE family, member 5##AK315254|CTAGE5|4253|CTAGE family, member 5##BC029513|CTAGE5|4253|CTAGE family, member 5##BC051363|CTAGE5|4253|CTAGE family, member 5##U73682|CTAGE5|4253|CTAGE family, member 5##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28	0.0	
chr10	49868000	49868150	reg1003204.p1	15.469	+	TSC_hg19_v1_chr10_-_49864302 AK055937	-3770	-	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	-54988	-	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	-258403	+	TSC_hg19_v1_chr10_+_49892917 BC034937	24815	+	AK127650 NM_020945	25440	+	NM_001006939 BC036722	254205	-	AK055937|ARHGAP22|58504|Rho GTPase activating protein 22##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22##BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##BC034937|WDFY4|57705|WDFY family member 4##AK127650|WDFY4|57705|WDFY family member 4##NM_020945|WDFY4|57705|WDFY family member 4##NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18	0.504934	CTCF.p2:-34:0.505
chr14	21323949	21324084	reg1002302.p1	15.469	+	TSC_hg19_v1_chr14_-_21271004 AK312100 BC022882 BC005324 NM_002933 NM_198234 NM_198235	-52998	-	AK098375 NM_198232	-53469	-	BC020848 NM_005615 AK313580	-74798	+	TSC_hg19_v1_chr14_+_21359543 NM_002935 X15161 M28128 BC096060 BC096061 BC096062	35543	+	TSC_hg19_v1_chr14_+_21423628 NM_002934 X55988 BC093678 BC093680 M28129 M24157 BC096059 M30510	99632	+	NM_001029991 NM_022734	133948	+	AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##AK098375|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198232|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC020848|RNASE6|6039|ribonuclease, RNase A family, k6##NM_005615|RNASE6|6039|ribonuclease, RNase A family, k6##AK313580|RNASE6|6039|ribonuclease, RNase A family, k6##NM_002935|RNASE3|6037|ribonuclease, RNase A family, 3##X15161|RNASE3|6037|ribonuclease, RNase A family, 3##M28128|RNASE3|6037|ribonuclease, RNase A family, 3##BC096060|RNASE3|6037|ribonuclease, RNase A family, 3##BC096061|RNASE3|6037|ribonuclease, RNase A family, 3##BC096062|RNASE3|6037|ribonuclease, RNase A family, 3##NM_002934|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##X55988|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093678|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093680|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M28129|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M24157|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC096059|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M30510|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##NM_001029991|METTL17|64745|methyltransferase like 17##NM_022734|METTL17|64745|methyltransferase like 17	0.0	
chr1	2126735	2126871	reg1002427.p1	15.468	+	TSC_hg19_v1_chr1_-_2126212 BC041041 AF469129 BC066360 AK055593 BC103992 NM_182533	-624	-	NM_001033582	-90649	+	NM_001242874 AK294782	-121336	+	AK127994 NM_001146310	12368	-	NM_003036 X15218 TSC_hg19_v1_chr1_+_2160159	33366	+	TSC_hg19_v1_chr1_-_2322994 AK024003 NM_024848	196189	-	BC041041|C1orf86|199990|chromosome 1 open reading frame 86##AF469129|C1orf86|199990|chromosome 1 open reading frame 86##BC066360|C1orf86|199990|chromosome 1 open reading frame 86##AK055593|C1orf86|199990|chromosome 1 open reading frame 86##BC103992|C1orf86|199990|chromosome 1 open reading frame 86##NM_182533|C1orf86|199990|chromosome 1 open reading frame 86##NM_001033582|PRKCZ|5590|protein kinase C, zeta##NM_001242874|PRKCZ|5590|protein kinase C, zeta##AK294782|PRKCZ|5590|protein kinase C, zeta##AK127994|C1orf86|199990|chromosome 1 open reading frame 86##NM_001146310|C1orf86|199990|chromosome 1 open reading frame 86##NM_003036|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##X15218|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##AK024003|MORN1|79906|MORN repeat containing 1##NM_024848|MORN1|79906|MORN repeat containing 1	0.920891	CTCF.p2:-5:0.921
chr19	17178366	17178503	reg1002717.p1	15.468	+	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-40894	-	AK075099 TSC_hg19_v1_chr19_-_17014494	-163981	-	AK092632 TSC_hg19_v1_chr19_-_17007756 AK124052	-170686	-	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	7887	-	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	8159	+	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	147738	+	AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK075099|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK092632|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK124052|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)	0.03856	
chr13	50422219	50422346	reg1002292.p1	15.465	+	TSC_hg19_v1_chr13_-_50367200 BC035090 NM_002267	-55159	-	TSC_hg19_v1_chr13_-_50366705 AK290528	-55547	-	TSC_hg19_v1_chr13_-_50366675 AF034756 DQ892644 DQ895882 AB528414 AF005263 Y12394 BC017355 BC024202 AK291000 AK223480	-55665	-	TSC_hg19_v1_chr13_-_50510444 AF052154 AF055016 BC022519 AK316576 BC007076 AK308818 AF334405 AK290576 NM_001127482 NM_020456	88235	-	TSC_hg19_v1_chr13_+_50571212 NM_001007278 NM_005798 NM_052811 NM_213590 AY455758 AY764035 AK314496 AF241850 BC029514 AY191002 BC003579 BC063407 AF220127 AL360196	148898	+	AY169387 AY169388 NM_173605 NM_199464 AK313401 AY129654 AY129653 BC020887 BC032343 AY190921 AY190922 AL832695 CU689344 DQ891601 DQ894796	167227	+	BC035090|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##NM_002267|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK290528|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AF034756|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##DQ892644|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##DQ895882|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AF005263|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##Y12394|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC017355|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC024202|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK291000|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK223480|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AF052154|SPRYD7|57213|SPRY domain containing 7##AF055016|SPRYD7|57213|SPRY domain containing 7##BC022519|SPRYD7|57213|SPRY domain containing 7##AK316576|SPRYD7|57213|SPRY domain containing 7##BC007076|SPRYD7|57213|SPRY domain containing 7##AK308818|SPRYD7|57213|SPRY domain containing 7##AF334405|SPRYD7|57213|SPRY domain containing 7##AK290576|SPRYD7|57213|SPRY domain containing 7##NM_001127482|SPRYD7|57213|SPRY domain containing 7##NM_020456|SPRYD7|57213|SPRY domain containing 7##NM_001007278|TRIM13|10206|tripartite motif containing 13##NM_005798|TRIM13|10206|tripartite motif containing 13##NM_052811|TRIM13|10206|tripartite motif containing 13##NM_213590|TRIM13|10206|tripartite motif containing 13##AY455758|TRIM13|10206|tripartite motif containing 13##AY764035|TRIM13|10206|tripartite motif containing 13##AK314496|TRIM13|10206|tripartite motif containing 13##AF241850|TRIM13|10206|tripartite motif containing 13##BC029514|TRIM13|10206|tripartite motif containing 13##AY191002|TRIM13|10206|tripartite motif containing 13##BC003579|TRIM13|10206|tripartite motif containing 13##BC063407|TRIM13|10206|tripartite motif containing 13##AF220127|TRIM13|10206|tripartite motif containing 13##AL360196|TRIM13|10206|tripartite motif containing 13##AY169387|KCNRG|283518|potassium channel regulator##AY169388|KCNRG|283518|potassium channel regulator##NM_173605|KCNRG|283518|potassium channel regulator##NM_199464|KCNRG|283518|potassium channel regulator##AK313401|KCNRG|283518|potassium channel regulator##AY129654|KCNRG|283518|potassium channel regulator##AY129653|KCNRG|283518|potassium channel regulator##BC020887|KCNRG|283518|potassium channel regulator##BC032343|KCNRG|283518|potassium channel regulator##AY190921|KCNRG|283518|potassium channel regulator##AY190922|KCNRG|283518|potassium channel regulator##AL832695|TRIM13|10206|tripartite motif containing 13##DQ891601|KCNRG|283518|potassium channel regulator##DQ894796|KCNRG|283518|potassium channel regulator	0.996783	CTCF.p2:10:0.997
chr4	7989225	7989347	reg1002102.p1	15.465	+	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	-47898	-	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	-552630	-	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-794891	+	TSC_hg19_v1_chr4_-_8073714 AK094798	84430	-	TSC_hg19_v1_chr4_-_8129388 AK301060	140099	-	DQ413176 AJ748600 AJ748601 TSC_hg19_v1_chr4_-_8160541 BC122567 AK130044 AK094754 BC067214 NM_001130083 NM_001130084 NM_001130085 NM_001130086 NM_001130087 NM_001130088 NM_032432	171248	-	AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2##DQ413176|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748600|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748601|ABLIM2|84448|actin binding LIM protein family, member 2##BC122567|ABLIM2|84448|actin binding LIM protein family, member 2##AK130044|ABLIM2|84448|actin binding LIM protein family, member 2##AK094754|ABLIM2|84448|actin binding LIM protein family, member 2##BC067214|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130083|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130084|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130085|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130086|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130087|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130088|ABLIM2|84448|actin binding LIM protein family, member 2##NM_032432|ABLIM2|84448|actin binding LIM protein family, member 2	0.984532	CTCF.p2:17:0.985
chr7	2491165	2491291	reg1002087.p1	15.465	+	TSC_hg19_v1_chr7_+_2443245 BC095492 BC002918 BC015954 AK223191 AK223211 AK313484 AF239822 AY358574	-47985	+	TSC_hg19_v1_chr7_+_2443191 NM_001243794 NM_001243795 NM_018641	-48048	+	TSC_hg19_v1_chr7_+_2394547 BC110865	-96681	+	AK096284 NM_001166355	60934	+	BC014851 NM_002304	66268	+	TSC_hg19_v1_chr7_+_2559407 NM_001040167 NM_001040168	68209	+	BC095492|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC002918|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC015954|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK223191|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK223211|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK313484|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AF239822|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AY358574|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_001243794|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_001243795|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_018641|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC110865|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##AK096284|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166355|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC014851|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002304|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001040167|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001040168|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	0.999442	CTCF.p2:-14:0.999
chr2	132170866	132170993	reg1002471.p1	15.462	+	NM_001077637	-49199	-	AY462868 AY462871 AY462872 AY462873 NM_001083538 AB464428	-194980	+	TSC_hg19_v1_chr2_+_131862905 AK000790 AK223338 AK293880 AK296008 BC050695 BC001428 BC013991	-308020	+	NM_080386 AK093116 AX747933 AK292253 BC057810	62707	+	BC063024 TSC_hg19_v1_chr2_-_132249961 BC018206	79027	-	TSC_hg19_v1_chr2_-_132250072 NM_001085365	79132	-	NM_001077637|WTH3DI|150786|RAB6C-like##AY462868|POTEE|445582|POTE ankyrin domain family, member E##AY462871|POTEE|445582|POTE ankyrin domain family, member E##AY462872|POTEE|445582|POTE ankyrin domain family, member E##AY462873|POTEE|445582|POTE ankyrin domain family, member E##NM_001083538|POTEE|445582|POTE ankyrin domain family, member E##AK000790|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK223338|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK293880|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK296008|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##BC050695|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##BC001428|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##BC013991|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_080386|TUBA3D|113457|tubulin, alpha 3d##AK093116|TUBA3D|113457|tubulin, alpha 3d##AK292253|TUBA3D|113457|tubulin, alpha 3d##BC057810|TUBA3D|113457|tubulin, alpha 3d##BC063024|MZT2A|653784|mitotic spindle organizing protein 2A##BC018206|MZT2A|653784|mitotic spindle organizing protein 2A##NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A	0.98203	CTCF.p2:-15:0.982
chr9	86159435	86159558	reg1002381.p1	15.462	+	AK094281 EF560742 TSC_hg19_v1_chr9_-_86153270 AK297722 AK223597 NM_001244959 NM_174938 BC041376	-6291	-	NM_001244960 AY137774	-76837	-	BC037253 NM_001244961	-212621	-	BC142991 BC036421 BC045782 TSC_hg19_v1_chr9_+_86238057 NM_001001551 NM_001190727 AY615889	78484	+	AF176069 AF293384 AB528730 TSC_hg19_v1_chr9_-_86322601	163104	-	TSC_hg19_v1_chr9_-_86322844 BC010066	163351	-	AK094281|FRMD3|257019|FERM domain containing 3##EF560742|FRMD3|257019|FERM domain containing 3##AK297722|FRMD3|257019|FERM domain containing 3##AK223597|FRMD3|257019|FERM domain containing 3##NM_001244959|FRMD3|257019|FERM domain containing 3##NM_174938|FRMD3|257019|FERM domain containing 3##BC041376|FRMD3|257019|FERM domain containing 3##NM_001244960|FRMD3|257019|FERM domain containing 3##AY137774|FRMD3|257019|FERM domain containing 3##BC037253|FRMD3|257019|FERM domain containing 3##NM_001244961|FRMD3|257019|FERM domain containing 3##BC142991|C9orf103|414328|chromosome 9 open reading frame 103##BC036421|C9orf103|414328|chromosome 9 open reading frame 103##BC045782|C9orf103|414328|chromosome 9 open reading frame 103##NM_001001551|C9orf103|414328|chromosome 9 open reading frame 103##NM_001190727|C9orf103|414328|chromosome 9 open reading frame 103##AY615889|C9orf103|414328|chromosome 9 open reading frame 103##AF176069|UBQLN1|29979|ubiquilin 1##AF293384|UBQLN1|29979|ubiquilin 1##BC010066|UBQLN1|29979|ubiquilin 1	0.96867	CTCF.p2:2:0.969
chr2	69152561	69152679	reg1002018.p1	15.461	+	BC069080 BC101734 BC105063 AF101441 NM_014482	-54045	-	BC032222 NM_001166276 NM_014882 AK311669 TSC_hg19_v1_chr2_+_69002068 BC039591 AK297157 AK298669 D29642	-150595	+	NM_001007231 NM_001166277 AK297056 TSC_hg19_v1_chr2_+_68962066 AK310742 AK290396	-190547	+	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	27436	-	AB039886 AJ966789 NM_019617 AB590637 AY139184 AK098489 AY456961 BC059778 AY359050	49122	+	TSC_hg19_v1_chr2_+_69240310 NM_018153 NM_032208 NM_053034 AF279145 AK001463 AY928974 AY928975 AY928976 AY928977 AK223273 BC012074 AK309553 AF421380 AK292113 CU680200 EU832615 EU832687	87763	+	BC069080|BMP10|27302|bone morphogenetic protein 10##BC101734|BMP10|27302|bone morphogenetic protein 10##BC105063|BMP10|27302|bone morphogenetic protein 10##AF101441|BMP10|27302|bone morphogenetic protein 10##NM_014482|BMP10|27302|bone morphogenetic protein 10##BC032222|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166276|ARHGAP25|9938|Rho GTPase activating protein 25##NM_014882|ARHGAP25|9938|Rho GTPase activating protein 25##AK311669|ARHGAP25|9938|Rho GTPase activating protein 25##BC039591|ARHGAP25|9938|Rho GTPase activating protein 25##AK297157|ARHGAP25|9938|Rho GTPase activating protein 25##AK298669|ARHGAP25|9938|Rho GTPase activating protein 25##D29642|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25##AK297056|ARHGAP25|9938|Rho GTPase activating protein 25##AK310742|ARHGAP25|9938|Rho GTPase activating protein 25##AK290396|ARHGAP25|9938|Rho GTPase activating protein 25##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2##AB039886|GKN1|56287|gastrokine 1##AJ966789|GKN1|56287|gastrokine 1##NM_019617|GKN1|56287|gastrokine 1##AY139184|GKN1|56287|gastrokine 1##AK098489|GKN1|56287|gastrokine 1##AY456961|GKN1|56287|gastrokine 1##BC059778|GKN1|56287|gastrokine 1##AY359050|GKN1|56287|gastrokine 1##NM_018153|ANTXR1|84168|anthrax toxin receptor 1##NM_032208|ANTXR1|84168|anthrax toxin receptor 1##NM_053034|ANTXR1|84168|anthrax toxin receptor 1##AF279145|ANTXR1|84168|anthrax toxin receptor 1##AK001463|ANTXR1|84168|anthrax toxin receptor 1##AK223273|ANTXR1|84168|anthrax toxin receptor 1##BC012074|ANTXR1|84168|anthrax toxin receptor 1##AK309553|ANTXR1|84168|anthrax toxin receptor 1##AF421380|ANTXR1|84168|anthrax toxin receptor 1##AK292113|ANTXR1|84168|anthrax toxin receptor 1##EU832615|ANTXR1|84168|anthrax toxin receptor 1##EU832687|ANTXR1|84168|anthrax toxin receptor 1	0.07702	
chr20	5769108	5769245	reg1002331.p1	15.460	+	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	-38110	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	-177589	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-474140	-	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	122950	+	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	161947	-	AJ439063 NM_032485 NM_182802 AK297806 BC101054 BC101055 BC101056 BC101057 BC080656 AY158211 BC005170 AK314654	162307	+	AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AJ439063|MCM8|84515|minichromosome maintenance complex component 8##NM_032485|MCM8|84515|minichromosome maintenance complex component 8##NM_182802|MCM8|84515|minichromosome maintenance complex component 8##AK297806|MCM8|84515|minichromosome maintenance complex component 8##BC101054|MCM8|84515|minichromosome maintenance complex component 8##BC101055|MCM8|84515|minichromosome maintenance complex component 8##BC101056|MCM8|84515|minichromosome maintenance complex component 8##BC101057|MCM8|84515|minichromosome maintenance complex component 8##BC080656|MCM8|84515|minichromosome maintenance complex component 8##AY158211|MCM8|84515|minichromosome maintenance complex component 8##BC005170|MCM8|84515|minichromosome maintenance complex component 8##AK314654|MCM8|84515|minichromosome maintenance complex component 8	1.031616	CTCF.p2:17:1.000
chr15	75978669	75978783	reg1001529.p1	15.458	+	BC018775 NM_153271 AL833039 EF219141 DQ891695 DQ895211 EU831407 EU831499	-37332	+	AB463774 AM393583 CU675427 CU680036 TSC_hg19_v1_chr15_-_75932566 BC020557 BC011745 AY050497 AL136913 BC006487 AK001830 AK223121 NM_018285	-46140	-	NM_001042588	-60008	-	AB462981 AY359468 X96753 TSC_hg19_v1_chr15_-_76005157	26402	-	TSC_hg19_v1_chr15_-_76005190 NM_001897	26469	-	TSC_hg19_v1_chr15_+_76016306 BC039862 NM_175881	37588	+	BC018775|SNX33|257364|sorting nexin 33##NM_153271|SNX33|257364|sorting nexin 33##AL833039|SNX33|257364|sorting nexin 33##EF219141|SNX33|257364|sorting nexin 33##DQ891695|SNX33|257364|sorting nexin 33##DQ895211|SNX33|257364|sorting nexin 33##EU831407|SNX33|257364|sorting nexin 33##EU831499|SNX33|257364|sorting nexin 33##AM393583|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC020557|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC011745|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AY050497|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AL136913|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC006487|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK001830|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK223121|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_018285|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_001042588|SNUPN|10073|snurportin 1##AY359468|CSPG4|1464|chondroitin sulfate proteoglycan 4##X96753|CSPG4|1464|chondroitin sulfate proteoglycan 4##NM_001897|CSPG4|1464|chondroitin sulfate proteoglycan 4##BC039862|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_175881|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1	0.956848	CTCF.p2:-6:0.858
chr1	116260279	116260384	reg1001606.p1	15.457	+	AB057596 NM_001172412	-75082	+	NM_001172411 NM_138959 BC065272 AF481859	-75739	+	BC032517 NM_002506 X52599	-379478	-	CU692536 DQ893219 DQ896548 D55655 AK225959 TSC_hg19_v1_chr1_-_116311307	50903	-	TSC_hg19_v1_chr1_-_116311336 AK295502 BC022288 AK313041	51020	-	AK129891 TSC_hg19_v1_chr1_-_116311410 NM_001232 AK293595	51085	-	AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##DQ893219|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ896548|CASQ2|845|calsequestrin 2 (cardiac muscle)##D55655|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK225959|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK295502|CASQ2|845|calsequestrin 2 (cardiac muscle)##BC022288|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK313041|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK129891|CASQ2|845|calsequestrin 2 (cardiac muscle)##NM_001232|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK293595|CASQ2|845|calsequestrin 2 (cardiac muscle)	0.996764	CTCF.p2:3:0.997
chr10	27171052	27171186	reg1001655.p2	15.455	+	TSC_hg19_v1_chr10_-_27149997 NM_001012750 NM_001012751 NM_001012752 NM_001178116 NM_001178119 NM_001178120 NM_001178121 NM_001178122 NM_001178123 NM_001178124 NM_001178125 NM_005470	-21114	-	TSC_hg19_v1_chr10_-_27149916 AF260262 AK298646 AK126803 AB040151	-21180	-	AB529081 FJ380057 FJ380058 FJ380059 TSC_hg19_v1_chr10_-_27149883 AF540955 AK296751 AF001628 AF006516 BC013238 U87166 AB209268 BC024254 AK291823	-21279	-	BC130453 TSC_hg19_v1_chr10_-_27389422 AB028997 AK001137 NM_014915	218265	-	AB384745 CU692788 BC019602 TSC_hg19_v1_chr10_-_27443272 AY358484 AK314372 AK291292	272088	-	TSC_hg19_v1_chr10_-_27443304 BC007795 BC023507 BC024032	272172	-	NM_001012750|ABI1|10006|abl-interactor 1##NM_001012751|ABI1|10006|abl-interactor 1##NM_001012752|ABI1|10006|abl-interactor 1##NM_001178116|ABI1|10006|abl-interactor 1##NM_001178119|ABI1|10006|abl-interactor 1##NM_001178120|ABI1|10006|abl-interactor 1##NM_001178121|ABI1|10006|abl-interactor 1##NM_001178122|ABI1|10006|abl-interactor 1##NM_001178123|ABI1|10006|abl-interactor 1##NM_001178124|ABI1|10006|abl-interactor 1##NM_001178125|ABI1|10006|abl-interactor 1##NM_005470|ABI1|10006|abl-interactor 1##AF260262|ABI1|10006|abl-interactor 1##AK298646|ABI1|10006|abl-interactor 1##AK126803|ABI1|10006|abl-interactor 1##AB040151|ABI1|10006|abl-interactor 1##FJ380057|ABI1|10006|abl-interactor 1##FJ380058|ABI1|10006|abl-interactor 1##FJ380059|ABI1|10006|abl-interactor 1##AF540955|ABI1|10006|abl-interactor 1##AK296751|ABI1|10006|abl-interactor 1##AF001628|ABI1|10006|abl-interactor 1##AF006516|ABI1|10006|abl-interactor 1##BC013238|ABI1|10006|abl-interactor 1##U87166|ABI1|10006|abl-interactor 1##AB209268|ABI1|10006|abl-interactor 1##BC024254|ABI1|10006|abl-interactor 1##AK291823|ABI1|10006|abl-interactor 1##BC130453|ANKRD26|22852|ankyrin repeat domain 26##AB028997|ANKRD26|22852|ankyrin repeat domain 26##AK001137|ANKRD26|22852|ankyrin repeat domain 26##NM_014915|ANKRD26|22852|ankyrin repeat domain 26##BC019602|YME1L1|10730|YME1-like 1 (S. cerevisiae)##AY358484|YME1L1|10730|YME1-like 1 (S. cerevisiae)##AK314372|YME1L1|10730|YME1-like 1 (S. cerevisiae)##AK291292|YME1L1|10730|YME1-like 1 (S. cerevisiae)##BC007795|YME1L1|10730|YME1-like 1 (S. cerevisiae)##BC023507|YME1L1|10730|YME1-like 1 (S. cerevisiae)##BC024032|YME1L1|10730|YME1-like 1 (S. cerevisiae)	0.020875	
chr14	23122359	23122475	reg1002093.p1	15.455	+	TSC_hg19_v1_chr14_+_23067208 AK022878 NM_022060 AX721056 BC024779 AK298127 AK301315 AK293198	-55228	+	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	-64283	-	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	-64331	-	BC112331 NM_005015 TSC_hg19_v1_chr14_+_23235896 AK294849 AK298249 BC001669 X80695 BX248295 BX248001	113428	+	TSC_hg19_v1_chr14_-_23284568 AK025377	162162	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	162215	-	AK022878|ABHD4|63874|abhydrolase domain containing 4##NM_022060|ABHD4|63874|abhydrolase domain containing 4##BC024779|ABHD4|63874|abhydrolase domain containing 4##AK298127|ABHD4|63874|abhydrolase domain containing 4##AK301315|ABHD4|63874|abhydrolase domain containing 4##AK293198|ABHD4|63874|abhydrolase domain containing 4##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC112331|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##NM_005015|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK294849|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK298249|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BC001669|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##X80695|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248295|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248001|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK025377|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	0.0	
chr3	46936802	46936928	reg1002478.p1	15.453	+	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	-13123	+	BC112221 BC112247 NM_000316 U17418 X68596	-17616	+	AF174483 CU679491 X07373 M24122 AK312044 BC009790 NM_000258	-31940	-	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	81380	-	TSC_hg19_v1_chr3_+_47021155 NM_015175 AK131104 AB384492	84382	+	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	92605	+	BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor##BC112221|PTH1R|5745|parathyroid hormone 1 receptor##BC112247|PTH1R|5745|parathyroid hormone 1 receptor##NM_000316|PTH1R|5745|parathyroid hormone 1 receptor##U17418|PTH1R|5745|parathyroid hormone 1 receptor##X68596|PTH1R|5745|parathyroid hormone 1 receptor##AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12##NM_015175|NBEAL2|23218|neurobeachin-like 2##AK131104|NBEAL2|23218|neurobeachin-like 2##AK092871|NBEAL2|23218|neurobeachin-like 2	0.976648	CTCF.p2:0:0.977
chr11	118161776	118161890	reg1001356.p2	15.452	+	TSC_hg19_v1_chr11_-_118135197 NM_005797 NM_144765	-26610	-	AF030455 AY359061 TSC_hg19_v1_chr11_-_118135010 AF304447 AF275945 BC017774	-26814	-	TSC_hg19_v1_chr11_-_118134957 AK290326	-26867	-	NM_000733 AK301255 AK311641 AK292612 BC033578 BC049847 X03884 CU690624	13647	+	JN392069 BC039035 AK311971 TSC_hg19_v1_chr11_-_118213368 BC070321 NM_000732 NM_001040651	51556	-	AK299997 NM_000073 AK313966 AK315895 AK310622 BC069685 X04145 X60492 AK223314 AK310578 BC113830	53251	+	NM_005797|MPZL2|10205|myelin protein zero-like 2##NM_144765|MPZL2|10205|myelin protein zero-like 2##AF030455|MPZL2|10205|myelin protein zero-like 2##AY359061|MPZL2|10205|myelin protein zero-like 2##AF304447|MPZL2|10205|myelin protein zero-like 2##AF275945|MPZL2|10205|myelin protein zero-like 2##BC017774|MPZL2|10205|myelin protein zero-like 2##AK290326|MPZL2|10205|myelin protein zero-like 2##NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##BC039035|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##AK311971|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##BC070321|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##NM_000732|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##NM_001040651|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	0.602996	CTCF.p2:7:0.603
chr8	74086664	74086795	reg1002164.p1	15.451	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	-81287	-	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	-165617	+	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	-637086	+	BC150551 BC150552 NM_001243237	85007	-	CR456773 L16558 AB529035 BC071671 BC071895 BC087837 BC071894 BC001476 BC006095 X57959 AB055763 AK225246 AK225254 AK291119 AK313365 X52967 BC009599 NM_000971	119128	-	TSC_hg19_v1_chr8_+_74206836 NM_172037	120080	+	AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##BC150551|LOC100130301|100130301|uncharacterized LOC100130301##BC150552|LOC100130301|100130301|uncharacterized LOC100130301##NM_001243237|LOC100130301|100130301|uncharacterized LOC100130301##CR456773|RPL7|6129|ribosomal protein L7##L16558|RPL7|6129|ribosomal protein L7##BC071671|RPL7|6129|ribosomal protein L7##BC071895|RPL7|6129|ribosomal protein L7##BC087837|RPL7|6129|ribosomal protein L7##BC071894|RPL7|6129|ribosomal protein L7##BC006095|RPL7|6129|ribosomal protein L7##X57959|RPL7|6129|ribosomal protein L7##AK225246|RPL7|6129|ribosomal protein L7##AK225254|RPL7|6129|ribosomal protein L7##AK291119|RPL7|6129|ribosomal protein L7##AK313365|RPL7|6129|ribosomal protein L7##X52967|RPL7|6129|ribosomal protein L7##BC009599|RPL7|6129|ribosomal protein L7##NM_000971|RPL7|6129|ribosomal protein L7##NM_172037|RDH10|157506|retinol dehydrogenase 10 (all-trans)	0.997543	CTCF.p2:7:0.998
chr1	154519015	154519124	reg1001669.p1	15.450	+	BC044864 NM_001098475 NM_182499	-44375	+	BC143765 BC117210 NM_001010846	-44545	-	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	-140995	+	BC107057 AY112698 TSC_hg19_v1_chr1_-_154531132 AY948200 NM_017582	12040	-	TSC_hg19_v1_chr1_+_154540253 NM_000748 U62437	21184	+	TSC_hg19_v1_chr1_+_154540307 X53179 AK313470 BC075040 BC075041 Y08415	21341	+	BC044864|TDRD10|126668|tudor domain containing 10##NM_001098475|TDRD10|126668|tudor domain containing 10##NM_182499|TDRD10|126668|tudor domain containing 10##BC143765|SHE|126669|Src homology 2 domain containing E##BC117210|SHE|126669|Src homology 2 domain containing E##NM_001010846|SHE|126669|Src homology 2 domain containing E##AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor##BC107057|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY112698|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY948200|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##NM_017582|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##NM_000748|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##U62437|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##X53179|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##AK313470|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##BC075040|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##BC075041|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##Y08415|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)	0.073213	
chr11	36724311	36724436	reg1001054.p1	15.447	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-104571	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-108269	+	NM_000448 M29474	-134805	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	3590221	-	AB046800 NM_020929	3591290	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	6609145	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.940607	CTCF.p2:-20:0.941
chr1	26222011	26222139	reg1001785.p1	15.447	+	BC034015 NM_178422	-24332	-	AK024326 NM_024037 AK223419 BC000209 GQ844687	-36201	-	BC017175 NM_001099626 AY007100	-74720	+	NM_203401	10568	-	BC082228 AB209282 X53305 BX647885 Z11566 AK303692 AK054594 AK311801 D28428 TSC_hg19_v1_chr1_-_26232911 J04991 BC014353 NM_001145454 NM_005563	10866	-	NM_203399	11292	-	BC034015|PAQR7|164091|progestin and adipoQ receptor family member VII##NM_178422|PAQR7|164091|progestin and adipoQ receptor family member VII##AK024326|C1orf135|79000|chromosome 1 open reading frame 135##NM_024037|C1orf135|79000|chromosome 1 open reading frame 135##AK223419|C1orf135|79000|chromosome 1 open reading frame 135##BC000209|C1orf135|79000|chromosome 1 open reading frame 135##GQ844687|C1orf135|79000|chromosome 1 open reading frame 135##BC017175|FAM54B|56181|family with sequence similarity 54, member B##NM_001099626|FAM54B|56181|family with sequence similarity 54, member B##AY007100|FAM54B|56181|family with sequence similarity 54, member B##NM_203401|STMN1|3925|stathmin 1##BC082228|STMN1|3925|stathmin 1##AB209282|STMN1|3925|stathmin 1##X53305|STMN1|3925|stathmin 1##BX647885|STMN1|3925|stathmin 1##Z11566|STMN1|3925|stathmin 1##AK303692|STMN1|3925|stathmin 1##AK054594|STMN1|3925|stathmin 1##AK311801|STMN1|3925|stathmin 1##D28428|STMN1|3925|stathmin 1##J04991|STMN1|3925|stathmin 1##BC014353|STMN1|3925|stathmin 1##NM_001145454|STMN1|3925|stathmin 1##NM_005563|STMN1|3925|stathmin 1##NM_203399|STMN1|3925|stathmin 1	1.058847	CTCF.p2:-1:0.992
chr14	71605851	71605998	reg1002445.p1	15.447	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-231473	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-231791	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-330115	-	AF090989 AF090990 NM_015556	390117	+	AK294895 NM_001204423	792892	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	793229	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.999688	CTCF.p2:-21:1.000
chr9	115555636	115555763	reg1002437.p1	15.447	+	TSC_hg19_v1_chr9_+_115513056 NM_001012994	-42608	+	TSC_hg19_v1_chr9_-_115480398 BC065210 AK310007 BC014881 NM_021218 AK000637	-75311	-	AF161411 TSC_hg19_v1_chr9_-_115480339 AF161409	-75361	-	TSC_hg19_v1_chr9_+_115631819 AK129991	76166	+	CU690566 BC048285 AK314414 AK055571 AF242557 NM_033051	97377	-	AK095843 NM_001101338	218772	-	NM_001012994|SNX30|401548|sorting nexin family member 30##BC065210|C9orf80|58493|chromosome 9 open reading frame 80##AK310007|C9orf80|58493|chromosome 9 open reading frame 80##BC014881|C9orf80|58493|chromosome 9 open reading frame 80##NM_021218|C9orf80|58493|chromosome 9 open reading frame 80##AK000637|C9orf80|58493|chromosome 9 open reading frame 80##AF161411|C9orf80|58493|chromosome 9 open reading frame 80##AF161409|C9orf80|58493|chromosome 9 open reading frame 80##AK129991|SNX30|401548|sorting nexin family member 30##BC048285|SLC46A2|57864|solute carrier family 46, member 2##AK314414|SLC46A2|57864|solute carrier family 46, member 2##AK055571|SLC46A2|57864|solute carrier family 46, member 2##AF242557|SLC46A2|57864|solute carrier family 46, member 2##NM_033051|SLC46A2|57864|solute carrier family 46, member 2##AK095843|ZNF883|169834|zinc finger protein 883##NM_001101338|ZNF883|169834|zinc finger protein 883	0.999179	CTCF.p2:-3:0.999
chr5	159507946	159508060	reg1001381.p1	15.446	+	AK222641 TSC_hg19_v1_chr5_+_159436161 AK222984 NM_003314 U46570	-71836	+	TSC_hg19_v1_chr5_+_159436145 AK315262	-71856	+	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	-164178	+	TSC_hg19_v1_chr5_-_159546405 AB067522 BC035076 BC105110 BC143437 NM_001130864 NM_052927	38456	-	DQ132786 NM_001130958	106370	+	NM_001040442 AB528665	118077	+	AK222641|TTC1|7265|tetratricopeptide repeat domain 1##AK222984|TTC1|7265|tetratricopeptide repeat domain 1##NM_003314|TTC1|7265|tetratricopeptide repeat domain 1##U46570|TTC1|7265|tetratricopeptide repeat domain 1##AK315262|TTC1|7265|tetratricopeptide repeat domain 1##NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##AB067522|PWWP2A|114825|PWWP domain containing 2A##BC035076|PWWP2A|114825|PWWP domain containing 2A##BC105110|PWWP2A|114825|PWWP domain containing 2A##BC143437|PWWP2A|114825|PWWP domain containing 2A##NM_001130864|PWWP2A|114825|PWWP domain containing 2A##NM_052927|PWWP2A|114825|PWWP domain containing 2A##DQ132786|FABP6|2172|fatty acid binding protein 6, ileal##NM_001130958|FABP6|2172|fatty acid binding protein 6, ileal##NM_001040442|FABP6|2172|fatty acid binding protein 6, ileal	0.996211	CTCF.p2:-8:0.996
chr9	92864691	92864835	reg1002484.p1	15.444	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-644782	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-751756	-	BC054500 NM_001142287 NM_006378	-770153	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	540356	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	699273	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	699304	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.878008	CTCF.p2:16:0.854
chr2	44706647	44706789	reg1001732.p1	15.441	+	NM_024766 TSC_hg19_v1_chr2_+_44589085 BC029359 AK027104 BC053733	-117626	+	AK131463 NM_001171603 NM_001171617	-117747	-	AB007896 TSC_hg19_v1_chr2_-_44588634 BC151236 AK025649 NM_001171606 NM_001171613	-118038	-	AJ012611 NM_005413 AL162671	462328	+	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	529832	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	1088410	-	NM_024766|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC029359|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK027104|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC053733|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK131463|PREPL|9581|prolyl endopeptidase-like##NM_001171603|PREPL|9581|prolyl endopeptidase-like##NM_001171617|PREPL|9581|prolyl endopeptidase-like##AB007896|PREPL|9581|prolyl endopeptidase-like##BC151236|PREPL|9581|prolyl endopeptidase-like##AK025649|PREPL|9581|prolyl endopeptidase-like##NM_001171606|PREPL|9581|prolyl endopeptidase-like##NM_001171613|PREPL|9581|prolyl endopeptidase-like##AJ012611|SIX3|6496|SIX homeobox 3##NM_005413|SIX3|6496|SIX homeobox 3##AL162671|SIX3|6496|SIX homeobox 3##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1	1.278557	CTCF.p2:1:0.964	CTCF.p2:48:0.263
chr9	92164073	92164208	reg1002572.p1	15.441	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-51133	-	BC054500 NM_001142287 NM_006378	-69530	-	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-230722	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	55841	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	1240979	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1399896	+	BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase	0.392113	CTCF.p2:2:0.392
chr1	101754095	101754224	reg1001585.p2	15.440	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-51589	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-51778	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-262726	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	708328	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	708631	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1742624	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.999869	CTCF.p2:5:1.000
chr21	43729899	43730031	reg1001595.p4	15.440	+	TSC_hg19_v1_chr21_+_43710190 AF038175	-19752	+	AK298491 AF323664 NM_207174	-89997	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	-90672	+	L08044 DQ891963 DQ895153 L15203 BC017859 TSC_hg19_v1_chr21_-_43735520	5526	-	NM_003226 AF432265	5767	-	X51698 BC032820 NM_005423	41173	-	AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK298491|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323664|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207174|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##L08044|TFF3|7033|trefoil factor 3 (intestinal)##DQ891963|TFF3|7033|trefoil factor 3 (intestinal)##DQ895153|TFF3|7033|trefoil factor 3 (intestinal)##L15203|TFF3|7033|trefoil factor 3 (intestinal)##BC017859|TFF3|7033|trefoil factor 3 (intestinal)##NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2	0.970145	CTCF.p2:-3:0.970
chr7	144088987	144089108	reg1002468.p1	15.440	+	AK160365 TSC_hg19_v1_chr7_+_144052469 NM_005435 CR749203 BC136661	-36544	+	NM_001001802 NM_001005287	-73830	+	CR749203 TSC_hg19_v1_chr7_-_143991278	-97780	-	NM_001080413 AB528776	18272	-	TSC_hg19_v1_chr7_-_144533086 AK091736	444042	-	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	444089	-	AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_001001802|OR2A42|402317|olfactory receptor, family 2, subfamily A, member 42##NM_001005287|OR2A1|346528|olfactory receptor, family 2, subfamily A, member 1##CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##AK091736|TPK1|27010|thiamin pyrophosphokinase 1##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1	0.991528	CTCF.p2:19:0.992
chr19	13541934	13542042	reg1001628.p2	15.439	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-277808	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-280696	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-280849	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	75188	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	300591	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	316731	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.024557	
chr1	227015873	227016005	reg1001622.p2	15.438	+	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	-89001	-	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-279322	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-279438	+	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	42341	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	112007	+	TSC_hg19_v1_chr1_+_227127991 BX648860 BC005171	112036	+	BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3##BX648860|ADCK3|56997|aarF domain containing kinase 3##BC005171|ADCK3|56997|aarF domain containing kinase 3	0.964694	CTCF.p2:11:0.965
chr19	45274043	45274159	reg1001482.p2	15.438	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	-22120	+	BC144608 NM_001039213	-71681	+	BC083499 NM_001127893 NM_020219	-99378	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	7055	+	TSC_hg19_v1_chr19_+_45312359 BC014065 NM_001013257 NM_005581 X83425 BC036745 X80026 BC050450 AB463427 CU690688 HE572749	38255	+	NM_001042724 NM_002856 TSC_hg19_v1_chr19_+_45349482	75341	+	NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##BC083499|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_001127893|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_020219|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_001042724|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##NM_002856|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)	0.998966	CTCF.p2:6:0.999
chr4	82765964	82766092	reg1002567.p1	15.436	+	TSC_hg19_v1_chr4_-_82393062 AK291459 BC036784 AK303625 AK056257 NM_152545	-372968	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	-373045	-	AB528214 D70899 NM_006259 X94612	-639821	-	D55671 TSC_hg19_v1_chr4_-_83294725	528647	-	AF039575 X03910 AB463729 DQ892240 DQ895440 BC002401 TSC_hg19_v1_chr4_-_83294907	528844	-	TSC_hg19_v1_chr4_-_83295122 D55674 AK057836 D55672 BC023977 BC026015	529052	-	AK291459|RASGEF1B|153020|RasGEF domain family, member 1B##BC036784|RASGEF1B|153020|RasGEF domain family, member 1B##AK303625|RASGEF1B|153020|RasGEF domain family, member 1B##AK056257|RASGEF1B|153020|RasGEF domain family, member 1B##NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##D55671|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##AF039575|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##X03910|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##DQ892240|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##DQ895440|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##BC002401|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##D55674|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##AK057836|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##D55672|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##BC023977|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##BC026015|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	0.02891	
chr12	50464395	50464523	reg1002920.p1	15.435	+	NM_001095 NM_020039 U78180 U78181 BC028722 AK290010	-12898	+	BC024144 AB030251 TSC_hg19_v1_chr12_-_50419242 AK000733 AL136794 BC032754 AK315785 NM_001126103 NM_001126104 NM_013277	-45226	-	NM_001652 U48408	-97840	+	TSC_hg19_v1_chr12_+_50479018 NM_003076 NM_139071 U66617 BC009368	14528	+	TSC_hg19_v1_chr12_+_50479124 AK292700 AK293932 AK130517 AB527887 CU679327 EU447009 BC000063 AF109733	14654	+	AK130162 TSC_hg19_v1_chr12_+_50497790 BC032234 NM_005276 AK295911 L34041 AK312516 DQ890626 DQ893793 CU689308	33352	+	NM_001095|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##NM_020039|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78180|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78181|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##BC028722|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##AK290010|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##BC024144|RACGAP1|29127|Rac GTPase activating protein 1##AB030251|RACGAP1|29127|Rac GTPase activating protein 1##AK000733|RACGAP1|29127|Rac GTPase activating protein 1##AL136794|RACGAP1|29127|Rac GTPase activating protein 1##BC032754|RACGAP1|29127|Rac GTPase activating protein 1##AK315785|RACGAP1|29127|Rac GTPase activating protein 1##NM_001126103|RACGAP1|29127|Rac GTPase activating protein 1##NM_001126104|RACGAP1|29127|Rac GTPase activating protein 1##NM_013277|RACGAP1|29127|Rac GTPase activating protein 1##NM_001652|AQP6|363|aquaporin 6, kidney specific##U48408|AQP6|363|aquaporin 6, kidney specific##NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK130162|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##BC032234|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##NM_005276|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##AK295911|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##L34041|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##AK312516|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##DQ890626|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##DQ893793|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)	0.998759	CTCF.p2:4:0.999
chr15	77925930	77926054	reg1001542.p1	15.435	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-1212	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-1293	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-212730	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	443961	-	NM_001101404	458934	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	497770	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	1.999624	CTCF.p2:21:1.000	CTCF.p2:-37:1.000
chr3	53168849	53168959	reg1001105.p1	15.435	+	TSC_hg19_v1_chr3_-_53164452 AJ318099 BC043595 NM_052859	-4453	-	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	-88841	-	TSC_hg19_v1_chr3_-_53080023 BC014614 AF168132	-88910	-	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	26315	+	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	121107	-	TSC_hg19_v1_chr3_-_53290099 NM_001064 NM_001135055	121210	-	AJ318099|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043595|RFT1|91869|RFT1 homolog (S. cerevisiae)##NM_052859|RFT1|91869|RFT1 homolog (S. cerevisiae)##AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1##BC014614|SFMBT1|51460|Scm-like with four mbt domains 1##AF168132|SFMBT1|51460|Scm-like with four mbt domains 1##BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase##NM_001064|TKT|7086|transketolase##NM_001135055|TKT|7086|transketolase	0.960103	CTCF.p2:0:0.960
chr1	120156535	120156647	reg1001649.p1	15.434	+	NM_000862 S45679 AK291556 BC031999 M35493 X53321 M27137 DQ891161 DQ894342 CU689258 X55997	-106629	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	-198830	+	NM_001166120	-199038	+	NM_001080470	33798	-	NM_006623 AK315360 BC011262 TSC_hg19_v1_chr1_+_120254558 AK309662 AK310132 AF171237 BC000303 BC001349 BC023235 DQ892073 EU176546 AB528378 CR456795	97940	+	CR456850 BC044217 X83618 AK301594 AK313590 TSC_hg19_v1_chr1_-_120311529 AK302276 AK303777 NM_001166107 NM_005518	154919	-	NM_000862|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##S45679|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##AK291556|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##BC031999|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M35493|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X53321|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M27137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ891161|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ894342|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X55997|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_001080470|ZNF697|90874|zinc finger protein 697##NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase##AK315360|PHGDH|26227|phosphoglycerate dehydrogenase##BC011262|PHGDH|26227|phosphoglycerate dehydrogenase##AK309662|PHGDH|26227|phosphoglycerate dehydrogenase##AK310132|PHGDH|26227|phosphoglycerate dehydrogenase##AF171237|PHGDH|26227|phosphoglycerate dehydrogenase##BC000303|PHGDH|26227|phosphoglycerate dehydrogenase##BC001349|PHGDH|26227|phosphoglycerate dehydrogenase##BC023235|PHGDH|26227|phosphoglycerate dehydrogenase##DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase##EU176546|PHGDH|26227|phosphoglycerate dehydrogenase##CR456795|PHGDH|26227|phosphoglycerate dehydrogenase##CR456850|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##BC044217|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##X83618|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK301594|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK313590|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK302276|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK303777|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_001166107|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_005518|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)	0.723338	CTCF.p2:-21:0.723
chr2	171669373	171669496	reg1001650.p1	15.433	+	TSC_hg19_v1_chr2_+_171572707 BC069026	-96724	+	TSC_hg19_v1_chr2_+_171571942 AB464708	-97457	+	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	-97576	+	M81883 NM_000817 NM_013445 BC037780 TSC_hg19_v1_chr2_+_171673241	3725	+	TSC_hg19_v1_chr2_+_171673396 AK292582 BC026349 BC002815 S61898 L16888 Z22750	3978	+	NM_001201428 AL117430 AK125761 NM_015530	115557	+	BC069026|SP5|389058|Sp5 transcription factor##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##M81883|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_000817|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_013445|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC037780|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##AK292582|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC026349|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC002815|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##S61898|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##L16888|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##Z22750|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_001201428|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AL117430|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK125761|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##NM_015530|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa	0.999608	CTCF.p2:9:1.000
chr1	40368013	40368156	reg1002510.p1	15.430	+	TSC_hg19_v1_chr1_-_40367563 AK296078 AB527750 BC030694 BC011864 NM_001033081 NM_001033082 NM_005376	-472	-	TSC_hg19_v1_chr1_-_40349179 AK223478 AK304759 AY303390 BC128155 BC128156 NM_017646 BC107569	-18910	-	AK296453 AK307910 TSC_hg19_v1_chr1_-_40349167	-18917	-	TSC_hg19_v1_chr1_+_40420783 NM_001136493 NM_032793	52701	+	TSC_hg19_v1_chr1_+_40420821 BC011587 AK075183 AK301533 AB073383 AK027396 AK297991 AK093223 AK291540 AX747998 AF289609 AL834184	52734	+	TSC_hg19_v1_chr1_+_40420841 BC092414 BC069694 BC069771 AK074186 CU679972	52816	+	AK296078|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##BC030694|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##BC011864|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##NM_001033081|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##NM_001033082|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##NM_005376|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##AK223478|TRIT1|54802|tRNA isopentenyltransferase 1##AK304759|TRIT1|54802|tRNA isopentenyltransferase 1##AY303390|TRIT1|54802|tRNA isopentenyltransferase 1##BC128155|TRIT1|54802|tRNA isopentenyltransferase 1##BC128156|TRIT1|54802|tRNA isopentenyltransferase 1##NM_017646|TRIT1|54802|tRNA isopentenyltransferase 1##BC107569|TRIT1|54802|tRNA isopentenyltransferase 1##AK296453|TRIT1|54802|tRNA isopentenyltransferase 1##AK307910|TRIT1|54802|tRNA isopentenyltransferase 1##NM_001136493|MFSD2A|84879|major facilitator superfamily domain containing 2A##NM_032793|MFSD2A|84879|major facilitator superfamily domain containing 2A##BC011587|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK075183|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK301533|MFSD2A|84879|major facilitator superfamily domain containing 2A##AB073383|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK027396|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK297991|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK093223|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK291540|MFSD2A|84879|major facilitator superfamily domain containing 2A##AF289609|MFSD2A|84879|major facilitator superfamily domain containing 2A##AL834184|MFSD2A|84879|major facilitator superfamily domain containing 2A##BC092414|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK074186|MFSD2A|84879|major facilitator superfamily domain containing 2A	0.71307	CTCF.p2:2:0.713
chr3	131513740	131513879	reg1001706.p1	15.430	+	TSC_hg19_v1_chr3_-_131221816 CR456720 CU678442 BC002345 X06323 BC003375 AK301377 AK296626 NM_007208	-292055	-	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	-413158	+	TSC_hg19_v1_chr3_+_131080737 AK000532 BC015593	-433066	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	240031	-	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	522429	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	522479	+	CR456720|MRPL3|11222|mitochondrial ribosomal protein L3##X06323|MRPL3|11222|mitochondrial ribosomal protein L3##BC003375|MRPL3|11222|mitochondrial ribosomal protein L3##AK301377|MRPL3|11222|mitochondrial ribosomal protein L3##AK296626|MRPL3|11222|mitochondrial ribosomal protein L3##NM_007208|MRPL3|11222|mitochondrial ribosomal protein L3##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK000532|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##BC015593|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate	0.760584	CTCF.p2:-10:0.761
chr1	109820191	109820311	reg1002329.p1	15.428	+	AF234887 NM_001408	-27611	+	TSC_hg19_v1_chr1_+_109756589 BC000716 D49914 AB528307 CU679341 DQ892144 DQ895339	-63652	+	TSC_hg19_v1_chr1_+_109756577 BC009390	-63680	+	TSC_hg19_v1_chr1_-_109825736 AK126567 AK289593 BX649139	5461	-	TSC_hg19_v1_chr1_-_109825755 BC017190	5503	-	TSC_hg19_v1_chr1_-_109825768 AF223000 NM_001005290 NM_001032291 NM_032636 BC056909	5536	-	AF234887|CELSR2|1952|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)##NM_001408|CELSR2|1952|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)##BC000716|SARS|6301|seryl-tRNA synthetase##D49914|SARS|6301|seryl-tRNA synthetase##DQ892144|SARS|6301|seryl-tRNA synthetase##DQ895339|SARS|6301|seryl-tRNA synthetase##BC009390|SARS|6301|seryl-tRNA synthetase##AK126567|PSRC1|84722|proline/serine-rich coiled-coil 1##AK289593|PSRC1|84722|proline/serine-rich coiled-coil 1##BX649139|PSRC1|84722|proline/serine-rich coiled-coil 1##AF223000|PSRC1|84722|proline/serine-rich coiled-coil 1##NM_001005290|PSRC1|84722|proline/serine-rich coiled-coil 1##NM_001032291|PSRC1|84722|proline/serine-rich coiled-coil 1##NM_032636|PSRC1|84722|proline/serine-rich coiled-coil 1##BC056909|PSRC1|84722|proline/serine-rich coiled-coil 1	0.980077	CTCF.p2:-7:0.980
chr14	24399096	24399218	reg1002451.p1	15.427	+	AK222857 NM_005794 NM_182908 AK309945 BC002786 U31875	-293579	+	BC055429 TSC_hg19_v1_chr14_-_24048004 AB058734 NM_001146028 NM_032452	-351157	-	TSC_hg19_v1_chr14_-_24047779 AK091572 AX747068	-351359	-	TSC_hg19_v1_chr14_-_24422882 BX247982	23719	-	TSC_hg19_v1_chr14_+_24422978 AY616182 DQ344810 NM_021004 AY358638 AF064256 AF044127 AK001870 AK308436 DQ325464 AK314448 AY071856 BC003019 AK301201 DQ338571	23870	+	BC062348 BC080582 TSC_hg19_v1_chr14_-_24423358 BX647964	24194	-	AK222857|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##NM_005794|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##NM_182908|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##AK309945|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##BC002786|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##U31875|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##BC055429|JPH4|84502|junctophilin 4##AB058734|JPH4|84502|junctophilin 4##NM_001146028|JPH4|84502|junctophilin 4##NM_032452|JPH4|84502|junctophilin 4##AK091572|JPH4|84502|junctophilin 4##BX247982|C14orf167|55449|chromosome 14 open reading frame 167##AY616182|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ344810|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##NM_021004|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY358638|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF064256|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF044127|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK001870|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK308436|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ325464|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK314448|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY071856|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##BC003019|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ338571|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##BC062348|C14orf167|55449|chromosome 14 open reading frame 167##BC080582|C14orf167|55449|chromosome 14 open reading frame 167##BX647964|C14orf167|55449|chromosome 14 open reading frame 167	0.993936	CTCF.p2:4:0.994
chr17	42997502	42997620	reg1001607.p1	15.427	+	BC062609 AB463686 J04569 BC013596 AF419299 BC041765 AK128790 TSC_hg19_v1_chr17_-_42992869 AK098380 AK098758 AK222683 AK295734 AK296259 AK303728 S40719 AK315398 NM_001131019 NM_001242376 NM_002055	-4676	-	BC127871 TSC_hg19_v1_chr17_-_42988807	-8759	-	M26638 TSC_hg19_v1_chr17_-_42988747	-8845	-	TSC_hg19_v1_chr17_-_43025057 NM_001080443	27501	-	TSC_hg19_v1_chr17_-_43045715 BC008798 NM_006688	48137	-	TSC_hg19_v1_chr17_-_43128979 AK290755 NM_001128631 AK026608	131368	-	BC062609|GFAP|2670|glial fibrillary acidic protein##J04569|GFAP|2670|glial fibrillary acidic protein##BC013596|GFAP|2670|glial fibrillary acidic protein##AF419299|GFAP|2670|glial fibrillary acidic protein##BC041765|GFAP|2670|glial fibrillary acidic protein##AK128790|GFAP|2670|glial fibrillary acidic protein##AK098380|GFAP|2670|glial fibrillary acidic protein##AK098758|GFAP|2670|glial fibrillary acidic protein##AK222683|GFAP|2670|glial fibrillary acidic protein##AK295734|GFAP|2670|glial fibrillary acidic protein##AK296259|GFAP|2670|glial fibrillary acidic protein##AK303728|GFAP|2670|glial fibrillary acidic protein##S40719|GFAP|2670|glial fibrillary acidic protein##AK315398|GFAP|2670|glial fibrillary acidic protein##NM_001131019|GFAP|2670|glial fibrillary acidic protein##NM_001242376|GFAP|2670|glial fibrillary acidic protein##NM_002055|GFAP|2670|glial fibrillary acidic protein##BC127871|GFAP|2670|glial fibrillary acidic protein##M26638|GFAP|2670|glial fibrillary acidic protein##NM_001080443|KIF18B|146909|kinesin family member 18B##BC008798|C1QL1|10882|complement component 1, q subcomponent-like 1##NM_006688|C1QL1|10882|complement component 1, q subcomponent-like 1##AK290755|DCAKD|79877|dephospho-CoA kinase domain containing##NM_001128631|DCAKD|79877|dephospho-CoA kinase domain containing##AK026608|DCAKD|79877|dephospho-CoA kinase domain containing	0.997328	CTCF.p2:-8:0.997
chr2	220163537	220163653	reg1002171.p1	15.427	+	TSC_hg19_v1_chr2_+_220144087 AK312723 NM_001039550 NM_006736 AK293888 BC011609 BC040494 AK292761 AK289626	-19448	+	BC009238 TSC_hg19_v1_chr2_-_220118641 AK054731 NM_006000	-44968	-	TSC_hg19_v1_chr2_+_220110219 AK292694 NM_001008910 AK310793 AK298471 AK225526 AF060798 BC002618 AF203910 AK225392 BC053998 AK096954 AK302182	-53388	+	TSC_hg19_v1_chr2_-_220173693 AK296335 NM_001199764	10115	-	AK314574 TSC_hg19_v1_chr2_-_220174093 AK294490 BC070053 L18983	10508	-	TSC_hg19_v1_chr2_-_220174202 AK291469 NM_001199763 NM_002846	10652	-	AK312723|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##NM_001039550|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##NM_006736|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK293888|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##BC011609|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##BC040494|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK292761|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK289626|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##BC009238|TUBA4A|7277|tubulin, alpha 4a##AK054731|TUBA4A|7277|tubulin, alpha 4a##NM_006000|TUBA4A|7277|tubulin, alpha 4a##AK292694|STK16|8576|serine/threonine kinase 16##NM_001008910|STK16|8576|serine/threonine kinase 16##AK310793|STK16|8576|serine/threonine kinase 16##AK298471|STK16|8576|serine/threonine kinase 16##AK225526|STK16|8576|serine/threonine kinase 16##AF060798|STK16|8576|serine/threonine kinase 16##BC002618|STK16|8576|serine/threonine kinase 16##AF203910|STK16|8576|serine/threonine kinase 16##AK225392|STK16|8576|serine/threonine kinase 16##BC053998|STK16|8576|serine/threonine kinase 16##AK096954|STK16|8576|serine/threonine kinase 16##AK302182|STK16|8576|serine/threonine kinase 16##AK296335|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##NM_001199764|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK314574|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK294490|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##BC070053|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##L18983|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK291469|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##NM_001199763|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##NM_002846|PTPRN|5798|protein tyrosine phosphatase, receptor type, N	0.936425	CTCF.p2:2:0.936
chr3	108208672	108208800	reg1001373.p1	15.427	+	BC035971 NM_007072	-187405	+	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	-193335	+	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	-267444	-	AB023217 NM_014981	39432	-	AB463087 AM393250 HQ258525 BC082961 TSC_hg19_v1_chr3_-_108308269 BC130564 BC136371 BC063433 AL713689 AF334474 AK056933 AK308315	99524	-	NM_014648 TSC_hg19_v1_chr3_+_108308395	99629	+	BC035971|HHLA2|11148|HERV-H LTR-associating 2##NM_007072|HHLA2|11148|HERV-H LTR-associating 2##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AB023217|MYH15|22989|myosin, heavy chain 15##NM_014981|MYH15|22989|myosin, heavy chain 15##AM393250|KIAA1524|57650|KIAA1524##BC082961|KIAA1524|57650|KIAA1524##BC130564|KIAA1524|57650|KIAA1524##BC136371|KIAA1524|57650|KIAA1524##BC063433|KIAA1524|57650|KIAA1524##AL713689|KIAA1524|57650|KIAA1524##AF334474|KIAA1524|57650|KIAA1524##AK056933|KIAA1524|57650|KIAA1524##AK308315|KIAA1524|57650|KIAA1524##NM_014648|DZIP3|9666|DAZ interacting protein 3, zinc finger	0.874703	CTCF.p2:0:0.875
chr4	15884377	15884514	reg1002324.p1	15.426	+	TSC_hg19_v1_chr4_+_15779950 AK303169 NM_001775 D84276 AK313268 M34461 BC007964 D84277 DQ893184 EU176777 AK297592	-104474	+	TSC_hg19_v1_chr4_+_15704753 AB175627 AB590680 BT019502	-179686	+	TSC_hg19_v1_chr4_+_15704695 AK312497 BC012095	-179750	+	BC003628 M60047 BC008910 BC018852 AK291307 TSC_hg19_v1_chr4_-_15939972	55515	-	NM_005130	55917	-	AF361936 CU693032 DQ892062 DQ895256 AB529223 BC025720 AB021123 AY358978 NM_031950	80359	-	AK303169|CD38|952|CD38 molecule##NM_001775|CD38|952|CD38 molecule##D84276|CD38|952|CD38 molecule##AK313268|CD38|952|CD38 molecule##M34461|CD38|952|CD38 molecule##BC007964|CD38|952|CD38 molecule##D84277|CD38|952|CD38 molecule##DQ893184|CD38|952|CD38 molecule##EU176777|CD38|952|CD38 molecule##AK297592|CD38|952|CD38 molecule##AB175627|BST1|683|bone marrow stromal cell antigen 1##BT019502|BST1|683|bone marrow stromal cell antigen 1##AK312497|BST1|683|bone marrow stromal cell antigen 1##BC012095|BST1|683|bone marrow stromal cell antigen 1##BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1##M60047|FGFBP1|9982|fibroblast growth factor binding protein 1##BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1##BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1##AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1##NM_005130|FGFBP1|9982|fibroblast growth factor binding protein 1##AF361936|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ892062|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ895256|FGFBP2|83888|fibroblast growth factor binding protein 2##BC025720|FGFBP2|83888|fibroblast growth factor binding protein 2##AB021123|FGFBP2|83888|fibroblast growth factor binding protein 2##AY358978|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_031950|FGFBP2|83888|fibroblast growth factor binding protein 2	0.811973	CTCF.p2:-18:0.812
chr7	6897466	6897590	reg1002627.p1	15.426	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-31630	-	AK296026 CU679629 AK000993 TSC_hg19_v1_chr7_-_6865849	-31690	-	AK314983 BC034495 NM_001099697 NM_173565	-103789	+	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	324719	+	BC136892 BC144431 AJ890451 NM_001037763	677926	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	709060	+	BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK296026|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK000993|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)	0.996917	CTCF.p2:4:0.997
chr10	30703081	30703201	reg1001546.p1	15.424	+	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	-64908	-	TSC_hg19_v1_chr10_-_30348516 AK308850 NM_020848 BC071601	-354647	-	TSC_hg19_v1_chr10_-_30316350 BC047548	-386710	-	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	19798	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	19980	+	AF139543 BC066294 NM_183058	215494	-	AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##AK308850|KIAA1462|57608|KIAA1462##NM_020848|KIAA1462|57608|KIAA1462##BC071601|KIAA1462|57608|KIAA1462##BC047548|KIAA1462|57608|KIAA1462##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2	0.018715	
chr12	15743421	15743539	reg1002344.p1	15.424	+	TSC_hg19_v1_chr12_+_15699551 AK290982	-43903	+	NM_030668 NM_030669 NM_030670 NM_030671 AF152378 AF187042 AF187043 AF187044	-44199	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	-267929	+	TSC_hg19_v1_chr12_-_15815073 AK316134	71660	-	TSC_hg19_v1_chr12_-_15865848 AK292931	122384	-	TSC_hg19_v1_chr12_-_15942323 U12535 BC005836 AK291777 BC030010	198752	-	AK290982|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK316134|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK292931|EPS8|2059|epidermal growth factor receptor pathway substrate 8##U12535|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC005836|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK291777|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC030010|EPS8|2059|epidermal growth factor receptor pathway substrate 8	0.91631	CTCF.p2:-15:0.916
chr6	51720214	51720355	reg1002379.p1	15.424	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-933749	+	AY028376 NM_172238	-1039028	+	DQ012016 NM_001037498	-1703921	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	232111	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	330922	+	AF384857 JF305974 AB590713 BC070124 NM_052872	388977	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.999736	CTCF.p2:-12:1.000
chr11	133004597	133004709	reg1001661.p1	15.423	+	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-191048	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-191639	-	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1223314	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	397661	-	AF521713 AK098717 NM_174927 BC058039	710728	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	822229	-	AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B	0.99672	CTCF.p2:-3:0.997
chr17	17259496	17259612	reg1001642.p1	15.423	+	TSC_hg19_v1_chr17_+_17206686 AF210652 NM_020201 BC035838	-52889	+	TSC_hg19_v1_chr17_-_17184612 BC001891 NM_003653	-74949	-	AB529019 CU674916 AK297706 AF031647 TSC_hg19_v1_chr17_-_17184588 AF098109 AK312476	-75010	-	NM_001243312	63103	+	TSC_hg19_v1_chr17_+_17380313 AK001055 NM_018019 BC000647 BC010906 BC104988 BC112029 AB463869	120761	+	TSC_hg19_v1_chr17_+_17398334 CU676147	138832	+	AF210652|NT5M|56953|5',3'-nucleotidase, mitochondrial##NM_020201|NT5M|56953|5',3'-nucleotidase, mitochondrial##BC035838|NT5M|56953|5',3'-nucleotidase, mitochondrial##BC001891|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##NM_003653|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AK297706|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AF031647|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AF098109|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AK312476|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##NM_001243312|SMCR9|140776|Smith-Magenis syndrome chromosome region, candidate 9##AK001055|MED9|55090|mediator complex subunit 9##NM_018019|MED9|55090|mediator complex subunit 9##BC000647|MED9|55090|mediator complex subunit 9##BC010906|MED9|55090|mediator complex subunit 9##BC104988|MED9|55090|mediator complex subunit 9##BC112029|MED9|55090|mediator complex subunit 9	0.029319	
chr18	43303002	43303110	reg1001677.p2	15.422	+	AF349446 NM_007163	-108291	+	NM_001242692 AK292422	-510104	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-1042188	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	1048	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	1101	+	NM_001146037	3861	+	AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.837613	CTCF.p2:-2:0.838
chr1	1837786	1837914	reg1002166.p1	15.421	+	TSC_hg19_v1_chr1_-_1822565 AK122949	-15282	-	TSC_hg19_v1_chr1_-_1822527 NM_002074	-15329	-	AK312614 TSC_hg19_v1_chr1_-_1822502	-15348	-	AF490905 AY566229 NM_138705	8415	+	AB528804 GQ129259 GQ129260 TSC_hg19_v1_chr1_-_1850719 NM_178545	12871	-	AK127388 NM_001080484	97425	-	AK122949|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##NM_002074|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##AK312614|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##AF490905|CALML6|163688|calmodulin-like 6##AY566229|CALML6|163688|calmodulin-like 6##NM_138705|CALML6|163688|calmodulin-like 6##GQ129259|TMEM52|339456|transmembrane protein 52##GQ129260|TMEM52|339456|transmembrane protein 52##NM_178545|TMEM52|339456|transmembrane protein 52##AK127388|KIAA1751|85452|KIAA1751##NM_001080484|KIAA1751|85452|KIAA1751	0.118921	
chr19	1546312	1546435	reg1002016.p1	15.421	+	AK054808 NM_001243079	-22301	+	BC040620 NM_213604	-33186	-	TSC_hg19_v1_chr19_-_1513019 AK302020 AK131571	-33359	-	DQ225272 DQ225273 TSC_hg19_v1_chr19_-_1567994 AY950680 NM_001174118 NM_203304	21592	-	AB528617 AF072247 NM_003926 TSC_hg19_v1_chr19_-_1592683	46285	-	BC009372 TSC_hg19_v1_chr19_-_1592751 AK290882 BC043619	46355	-	AK054808|PLK5|126520|polo-like kinase 5##NM_001243079|PLK5|126520|polo-like kinase 5##BC040620|ADAMTSL5|339366|ADAMTS-like 5##NM_213604|ADAMTSL5|339366|ADAMTS-like 5##AK302020|ADAMTSL5|339366|ADAMTS-like 5##AK131571|ADAMTSL5|339366|ADAMTS-like 5##DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)##DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)##AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)##NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)##NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)##AF072247|MBD3|53615|methyl-CpG binding domain protein 3##NM_003926|MBD3|53615|methyl-CpG binding domain protein 3##BC009372|MBD3|53615|methyl-CpG binding domain protein 3##AK290882|MBD3|53615|methyl-CpG binding domain protein 3##BC043619|MBD3|53615|methyl-CpG binding domain protein 3	0.354083	CTCF.p2:-3:0.354
chr19	49339100	49339221	reg1001683.p1	15.420	+	AK310243 U68418 CU674922 DQ892350 DQ895554 AF268047 AF268048 TSC_hg19_v1_chr19_-_49314287 BC001900 AK093627 AK309428 AK223522 AK310101 AK314548 NM_001164773 NM_001190	-24912	-	AY359086 NM_019113 AB021975 AB590410 DQ891786 DQ894970	-79742	+	D87935 D87936 D87937 NM_000148	-80514	-	AB528622 CU675337 TSC_hg19_v1_chr19_-_49339769 BC006283 BC006294 AK307437 AF126781	614	-	TSC_hg19_v1_chr19_-_49339923 NM_016246	763	-	BC064601 AB208908 BC025259 AY007233 BC024157 NM_001161354 NM_020904	32636	-	AK310243|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##U68418|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##DQ892350|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##DQ895554|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AF268047|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AF268048|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##BC001900|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK093627|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK309428|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK223522|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK310101|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK314548|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##NM_001164773|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##NM_001190|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AY359086|FGF21|26291|fibroblast growth factor 21##NM_019113|FGF21|26291|fibroblast growth factor 21##AB021975|FGF21|26291|fibroblast growth factor 21##DQ891786|FGF21|26291|fibroblast growth factor 21##DQ894970|FGF21|26291|fibroblast growth factor 21##D87935|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##D87936|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##D87937|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##NM_000148|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##BC006283|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##BC006294|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AK307437|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AF126781|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##NM_016246|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##BC064601|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##AB208908|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##BC025259|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##AY007233|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##BC024157|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##NM_001161354|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##NM_020904|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4	0.999801	CTCF.p2:0:1.000
chr13	45621597	45621713	reg1001674.p1	15.417	+	TSC_hg19_v1_chr13_+_45563672 AK304669 BC017776 BC039586 NM_018559 AK292493 AF145122 BC032333 AB051491	-57931	+	TSC_hg19_v1_chr13_-_45563607 AB528019 AF159548 BC001436 AK314242 NM_012345	-58060	-	TSC_hg19_v1_chr13_-_45150604 AB082525 NM_001243799 NM_183422	-471005	-	TSC_hg19_v1_chr13_+_45694638 NM_004128 AK291545	72959	+	TSC_hg19_v1_chr13_+_45694647 BC001771 X16901 AB527978 EU831971 EU832064 BT019525 X59745	73063	+	AK290675 NM_198404	153519	-	AK304669|KIAA1704|55425|KIAA1704##BC017776|KIAA1704|55425|KIAA1704##BC039586|KIAA1704|55425|KIAA1704##NM_018559|KIAA1704|55425|KIAA1704##AK292493|KIAA1704|55425|KIAA1704##AF145122|KIAA1704|55425|KIAA1704##BC032333|KIAA1704|55425|KIAA1704##AB051491|KIAA1704|55425|KIAA1704##AF159548|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##BC001436|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AK314242|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##NM_012345|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AB082525|TSC22D1|8848|TSC22 domain family, member 1##NM_001243799|TSC22D1|8848|TSC22 domain family, member 1##NM_183422|TSC22D1|8848|TSC22 domain family, member 1##NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##BC001771|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##X16901|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##EU831971|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##EU832064|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##BT019525|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##X59745|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##AK290675|KCTD4|386618|potassium channel tetramerisation domain containing 4##NM_198404|KCTD4|386618|potassium channel tetramerisation domain containing 4	0.527751	CTCF.p2:-12:0.528
chr2	109252927	109253080	reg1001831.p1	15.416	+	TSC_hg19_v1_chr2_+_109237706 AK304260 NM_001193484 AF527760 AK310547	-15300	+	TSC_hg19_v1_chr2_+_109223602 AF527762 NM_001193482	-29386	+	TSC_hg19_v1_chr2_+_109204921 BC005341 NM_001193488	-48034	+	AF527759 NM_001193485	18264	+	TSC_hg19_v1_chr2_+_109271492 AK302411 AK312178	18485	+	TSC_hg19_v1_chr2_+_109335970 D42063 NM_006267	82935	+	AK304260|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193484|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527760|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK310547|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527762|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193482|LIMS1|3987|LIM and senescent cell antigen-like domains 1##BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3##D42063|RANBP2|5903|RAN binding protein 2##NM_006267|RANBP2|5903|RAN binding protein 2	1.003701	CTCF.p2:-19:0.840
chr2	20063234	20063374	reg1002585.p1	15.416	+	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	-504925	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	-1292494	-	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	-1321388	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	5331	+	TSC_hg19_v1_chr2_-_20101456 BC050088	38124	-	CU691276 BC070381 TSC_hg19_v1_chr2_-_20101717 BC057850 NM_001008237	38377	-	BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946##BC070381|TTC32|130502|tetratricopeptide repeat domain 32##BC057850|TTC32|130502|tetratricopeptide repeat domain 32##NM_001008237|TTC32|130502|tetratricopeptide repeat domain 32	0.649021	CTCF.p2:19:0.638
chr3	121977749	121977892	reg1002276.p1	15.415	+	NM_001178065 U20760	-74640	+	NM_000388 U20759	-75291	+	NM_006889 NM_176892 U04343	-181098	+	NM_005213 AK291308 BC010379 X05978 CR456914	66254	+	BC019231 BC109378 TSC_hg19_v1_chr3_-_122102079 BC054051 BC062725 NM_001017928	124257	-	NM_014367 AK026030 BC010896 BC015060 AF201944 AF107495 AF250321 TSC_hg19_v1_chr3_+_122103076 AK293994 AF191020	125248	+	NM_001178065|CASR|846|calcium-sensing receptor##U20760|CASR|846|calcium-sensing receptor##NM_000388|CASR|846|calcium-sensing receptor##U20759|CASR|846|calcium-sensing receptor##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule##NM_005213|CSTA|1475|cystatin A (stefin A)##AK291308|CSTA|1475|cystatin A (stefin A)##BC010379|CSTA|1475|cystatin A (stefin A)##X05978|CSTA|1475|cystatin A (stefin A)##CR456914|CSTA|1475|cystatin A (stefin A)##BC109378|CCDC58|131076|coiled-coil domain containing 58##BC054051|CCDC58|131076|coiled-coil domain containing 58##BC062725|CCDC58|131076|coiled-coil domain containing 58##NM_001017928|CCDC58|131076|coiled-coil domain containing 58##NM_014367|FAM162A|26355|family with sequence similarity 162, member A##AK026030|FAM162A|26355|family with sequence similarity 162, member A##BC010896|FAM162A|26355|family with sequence similarity 162, member A##BC015060|FAM162A|26355|family with sequence similarity 162, member A##AF201944|FAM162A|26355|family with sequence similarity 162, member A##AF107495|FAM162A|26355|family with sequence similarity 162, member A##AF250321|FAM162A|26355|family with sequence similarity 162, member A##AK293994|FAM162A|26355|family with sequence similarity 162, member A##AF191020|FAM162A|26355|family with sequence similarity 162, member A	0.037498	
chr3	150886203	150886331	reg1001757.p2	15.413	+	AF399708 NM_053002 BC144559	-81590	+	TSC_hg19_v1_chr3_+_150803504 AK128165	-82762	+	AF482697 NM_001195794 NM_174878	-195482	-	AF002986 BC036815 NM_013308	34699	-	AK289617 NM_001081455	80682	-	BC034989 D13626 NM_014879	109924	-	AF399708|MED12L|116931|mediator complex subunit 12-like##NM_053002|MED12L|116931|mediator complex subunit 12-like##BC144559|MED12L|116931|mediator complex subunit 12-like##AK128165|MED12L|116931|mediator complex subunit 12-like##AF482697|CLRN1|7401|clarin 1##NM_001195794|CLRN1|7401|clarin 1##NM_174878|CLRN1|7401|clarin 1##AF002986|GPR171|29909|G protein-coupled receptor 171##BC036815|GPR171|29909|G protein-coupled receptor 171##NM_013308|GPR171|29909|G protein-coupled receptor 171##AK289617|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_001081455|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	0.997065	CTCF.p2:-9:0.997
chr12	119882380	119882508	reg1002623.p1	15.412	+	BC040553 NM_178499	-109928	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	-265765	+	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	-463097	+	NM_001136534 AK296289	148856	+	TSC_hg19_v1_chr12_+_120105769 AK312495 NM_006253 BC017671 AF022116 BC001007 BC001056 BC001823 BC018818 U83994 AK301165 Y12556 AB590811 AJ224515	223408	+	AK123136 TSC_hg19_v1_chr12_-_120241305	358853	-	BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##NM_001136534|TMEM233|387890|transmembrane protein 233##AK296289|TMEM233|387890|transmembrane protein 233##AK312495|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##NM_006253|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC017671|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AF022116|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001007|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001056|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001823|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC018818|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##U83994|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK301165|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##Y12556|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AJ224515|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK123136|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)	0.999631	CTCF.p2:8:1.000
chr5	156576005	156576140	reg1002281.p1	15.412	+	NM_001100816 TSC_hg19_v1_chr5_-_156569881 AK123613 AF031383 BC005250 BC006968 AK308393 NM_004270	-6220	-	TSC_hg19_v1_chr5_-_156536188 NM_032782	-39856	-	AK027334 TSC_hg19_v1_chr5_-_156536052 AF450242 AF450243 AK314406 BC020843 AF251707 BC063431	-39969	-	AY973323 CU692472 AF465821 BC025397 AK057543 BC022035 BC025409 BC025998 NM_130899	17156	-	BC094701 AB209622 D13720 NM_005546 BC109077 BC109078 AK312846 AK303609 AB590549	31845	+	TSC_hg19_v1_chr5_+_156693105 AL136549 NM_001037333 AK294220 AK295865 AK297401 AK303702 AB032994 AF160973 NM_001037332	117180	+	NM_001100816|MED7|9443|mediator complex subunit 7##AF031383|MED7|9443|mediator complex subunit 7##BC005250|MED7|9443|mediator complex subunit 7##BC006968|MED7|9443|mediator complex subunit 7##AK308393|MED7|9443|mediator complex subunit 7##NM_004270|MED7|9443|mediator complex subunit 7##NM_032782|HAVCR2|84868|hepatitis A virus cellular receptor 2##AK027334|HAVCR2|84868|hepatitis A virus cellular receptor 2##AF450242|HAVCR2|84868|hepatitis A virus cellular receptor 2##AF450243|HAVCR2|84868|hepatitis A virus cellular receptor 2##AK314406|HAVCR2|84868|hepatitis A virus cellular receptor 2##BC020843|HAVCR2|84868|hepatitis A virus cellular receptor 2##AF251707|HAVCR2|84868|hepatitis A virus cellular receptor 2##BC063431|HAVCR2|84868|hepatitis A virus cellular receptor 2##AY973323|FAM71B|153745|family with sequence similarity 71, member B##AF465821|FAM71B|153745|family with sequence similarity 71, member B##BC025397|FAM71B|153745|family with sequence similarity 71, member B##AK057543|FAM71B|153745|family with sequence similarity 71, member B##BC022035|FAM71B|153745|family with sequence similarity 71, member B##BC025409|FAM71B|153745|family with sequence similarity 71, member B##BC025998|FAM71B|153745|family with sequence similarity 71, member B##NM_130899|FAM71B|153745|family with sequence similarity 71, member B##AB209622|ITK|3702|IL2-inducible T-cell kinase##D13720|ITK|3702|IL2-inducible T-cell kinase##NM_005546|ITK|3702|IL2-inducible T-cell kinase##BC109077|ITK|3702|IL2-inducible T-cell kinase##BC109078|ITK|3702|IL2-inducible T-cell kinase##AK312846|ITK|3702|IL2-inducible T-cell kinase##AK303609|ITK|3702|IL2-inducible T-cell kinase##AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2	0.973949	CTCF.p2:-11:0.974
chr17	72740871	72740992	reg1002176.p1	15.411	+	TSC_hg19_v1_chr17_+_72733394 AK098068 NM_001006638 NM_001163990 AK298033 AK296172 BC016615	-7552	+	NM_001163989 TSC_hg19_v1_chr17_+_72733040 AK303442 AB528695	-7878	+	AF251706 AY303545 AK315165 TSC_hg19_v1_chr17_-_72709081 AK298752 AY358545 AK092757 AX747710 NM_139018 BC028199	-31864	-	TSC_hg19_v1_chr17_+_72744766 NM_004252 AK094467 AK128474 AK026581 BC049220	3829	+	TSC_hg19_v1_chr17_+_72744790 BC003361 AF015926 BC011777 BC053350	3853	+	TSC_hg19_v1_chr17_+_72744800 BC001443	3866	+	AK098068|RAB37|326624|RAB37, member RAS oncogene family##NM_001006638|RAB37|326624|RAB37, member RAS oncogene family##NM_001163990|RAB37|326624|RAB37, member RAS oncogene family##AK296172|RAB37|326624|RAB37, member RAS oncogene family##BC016615|RAB37|326624|RAB37, member RAS oncogene family##NM_001163989|RAB37|326624|RAB37, member RAS oncogene family##AK303442|RAB37|326624|RAB37, member RAS oncogene family##AF251706|CD300LF|146722|CD300 molecule-like family member f##AY303545|CD300LF|146722|CD300 molecule-like family member f##AK315165|CD300LF|146722|CD300 molecule-like family member f##AK298752|CD300LF|146722|CD300 molecule-like family member f##AY358545|CD300LF|146722|CD300 molecule-like family member f##AK092757|CD300LF|146722|CD300 molecule-like family member f##NM_139018|CD300LF|146722|CD300 molecule-like family member f##BC028199|CD300LF|146722|CD300 molecule-like family member f##NM_004252|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK094467|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK128474|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK026581|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC049220|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC003361|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AF015926|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC011777|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC053350|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC001443|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	0.994522	CTCF.p2:-9:0.995
chr14	75599240	75599357	reg1001432.p1	15.408	+	TSC_hg19_v1_chr14_-_75593752 AB082526 AK128693 NM_033116	-5546	-	AY048580 AB463142 AY080896 TSC_hg19_v1_chr14_-_75593718 BC093881 BC112101	-5628	-	NM_001042430 NM_024643 AK223359 AK303882 TSC_hg19_v1_chr14_+_75536343 AK026746 BC004259	-62955	+	AK023615 TSC_hg19_v1_chr14_-_75600130	822	-	TSC_hg19_v1_chr14_-_75643301 AL832012 AJ004913 X97442 L40397 AK222972 AK310371 BX248754	43996	-	TSC_hg19_v1_chr14_-_75643322 AK296800 AK312384	44022	-	AB082526|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##AK128693|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##NM_033116|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##AY048580|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##AY080896|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##BC093881|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##BC112101|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##NM_001042430|FAM164C|79696|family with sequence similarity 164, member C##NM_024643|FAM164C|79696|family with sequence similarity 164, member C##AK223359|FAM164C|79696|family with sequence similarity 164, member C##AK303882|FAM164C|79696|family with sequence similarity 164, member C##AK026746|FAM164C|79696|family with sequence similarity 164, member C##BC004259|FAM164C|79696|family with sequence similarity 164, member C##AK023615|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AL832012|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AJ004913|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##X97442|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##L40397|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK222972|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK310371|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BX248754|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK296800|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK312384|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)	0.92055	CTCF.p2:-22:0.921
chr5	139167168	139167280	reg1001834.p1	15.408	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	-106832	+	AF151029 TSC_hg19_v1_chr5_+_139060229	-107012	+	BC002490 TSC_hg19_v1_chr5_+_139060088 AB463548 GQ379202 AK314420	-107140	+	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	8182	+	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	255504	-	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	255621	-	DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##BC002490|CXXC5|51523|CXXC finger protein 5##GQ379202|CXXC5|51523|CXXC finger protein 5##AK314420|CXXC5|51523|CXXC finger protein 5##AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2	0.995722	CTCF.p2:-7:0.996
chr14	74292388	74292530	reg1002748.p1	15.406	+	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	-38540	-	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	-65494	-	BC015668 TSC_hg19_v1_chr14_-_74226640	-65821	-	TSC_hg19_v1_chr14_+_74318554 NM_001146154 NM_001146155 AY346133 AY424308 AK311280 NM_152444 BX641118 BC059364 AK309188 AK096410 BC034973	26130	+	NM_001242924 NM_001242926 NM_001242927 NM_001242928 NM_021188 AK299138	60859	+	BC050683 AK298520 TSC_hg19_v1_chr14_+_74353561 AK315206 AK223261 AK293350 AK298307 AK303834 AK304609 AK310031 AK301382 AK309957 BC000330 BC004357 U90919	61087	+	NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43##AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##BC015668|C14orf43|91748|chromosome 14 open reading frame 43##NM_001146154|PTGR2|145482|prostaglandin reductase 2##NM_001146155|PTGR2|145482|prostaglandin reductase 2##AY346133|PTGR2|145482|prostaglandin reductase 2##AY424308|PTGR2|145482|prostaglandin reductase 2##AK311280|PTGR2|145482|prostaglandin reductase 2##NM_152444|PTGR2|145482|prostaglandin reductase 2##BX641118|PTGR2|145482|prostaglandin reductase 2##BC059364|PTGR2|145482|prostaglandin reductase 2##AK309188|PTGR2|145482|prostaglandin reductase 2##AK096410|PTGR2|145482|prostaglandin reductase 2##NM_001242924|ZNF410|57862|zinc finger protein 410##NM_001242926|ZNF410|57862|zinc finger protein 410##NM_001242927|ZNF410|57862|zinc finger protein 410##NM_001242928|ZNF410|57862|zinc finger protein 410##NM_021188|ZNF410|57862|zinc finger protein 410##AK299138|ZNF410|57862|zinc finger protein 410##BC050683|ZNF410|57862|zinc finger protein 410##AK298520|ZNF410|57862|zinc finger protein 410##AK315206|ZNF410|57862|zinc finger protein 410##AK223261|ZNF410|57862|zinc finger protein 410##AK293350|ZNF410|57862|zinc finger protein 410##AK298307|ZNF410|57862|zinc finger protein 410##AK303834|ZNF410|57862|zinc finger protein 410##AK304609|ZNF410|57862|zinc finger protein 410##AK310031|ZNF410|57862|zinc finger protein 410##AK301382|ZNF410|57862|zinc finger protein 410##AK309957|ZNF410|57862|zinc finger protein 410##BC000330|ZNF410|57862|zinc finger protein 410##BC004357|ZNF410|57862|zinc finger protein 410##U90919|ZNF410|57862|zinc finger protein 410	0.0	
chr17	73629113	73629229	reg1002313.p1	15.405	+	TSC_hg19_v1_chr17_+_73598147 BC033247	-30960	+	AK074680 TSC_hg19_v1_chr17_+_73585572	-43609	+	AF418286 AF418287 AF418288 AF418289 AF418290 AF418291 TSC_hg19_v1_chr17_+_73584199	-44996	+	BC027861 NM_001162995	342	+	BC062771 NM_001162997 AK131023	13510	+	BC063440 EF560729 TSC_hg19_v1_chr17_-_73663235 BC016911 AK075084 AK304168 AB042823 AB042824 AB042825 NM_001003715 NM_001003716 NM_004259	34077	-	BC033247|MYO15B|80022|myosin XVB pseudogene##AK074680|MYO15B|80022|myosin XVB pseudogene##AF418286|MYO15B|80022|myosin XVB pseudogene##AF418287|MYO15B|80022|myosin XVB pseudogene##AF418288|MYO15B|80022|myosin XVB pseudogene##AF418289|MYO15B|80022|myosin XVB pseudogene##AF418290|MYO15B|80022|myosin XVB pseudogene##AF418291|MYO15B|80022|myosin XVB pseudogene##BC027861|C17orf109|643008|chromosome 17 open reading frame 109##NM_001162995|C17orf109|643008|chromosome 17 open reading frame 109##BC062771|C17orf110|100130933|chromosome 17 open reading frame 110##NM_001162997|C17orf110|100130933|chromosome 17 open reading frame 110##AK131023|C17orf110|100130933|chromosome 17 open reading frame 110##BC063440|RECQL5|9400|RecQ protein-like 5##EF560729|RECQL5|9400|RecQ protein-like 5##BC016911|RECQL5|9400|RecQ protein-like 5##AK075084|RECQL5|9400|RecQ protein-like 5##AK304168|RECQL5|9400|RecQ protein-like 5##AB042823|RECQL5|9400|RecQ protein-like 5##AB042824|RECQL5|9400|RecQ protein-like 5##AB042825|RECQL5|9400|RecQ protein-like 5##NM_001003715|RECQL5|9400|RecQ protein-like 5##NM_001003716|RECQL5|9400|RecQ protein-like 5##NM_004259|RECQL5|9400|RecQ protein-like 5	0.999862	CTCF.p2:3:1.000
chr9	116417801	116417935	reg1003144.p1	15.402	+	TSC_hg19_v1_chr9_+_116356408 BC018072 BC019039 CU676160	-61387	+	AF490838 NM_144489 AK054584	-61658	+	U27655 AK125094 TSC_hg19_v1_chr9_+_116343207	-74680	+	TSC_hg19_v1_chr9_+_116638585 BC036039 NM_133374 BC136287 BC143826 AK126896 BC053892	220731	+	TSC_hg19_v1_chr9_-_116840540 CU692002 AB463406 X04494	422632	-	TSC_hg19_v1_chr9_-_116840546 AY544123	422679	-	BC018072|RGS3|5998|regulator of G-protein signaling 3##BC019039|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3##U27655|RGS3|5998|regulator of G-protein signaling 3##AK125094|RGS3|5998|regulator of G-protein signaling 3##BC036039|ZNF618|114991|zinc finger protein 618##NM_133374|ZNF618|114991|zinc finger protein 618##BC136287|ZNF618|114991|zinc finger protein 618##BC143826|ZNF618|114991|zinc finger protein 618##AK126896|ZNF618|114991|zinc finger protein 618##BC053892|ZNF618|114991|zinc finger protein 618##X04494|AMBP|259|alpha-1-microglobulin/bikunin precursor##AY544123|AMBP|259|alpha-1-microglobulin/bikunin precursor	0.608467	CTCF.p2:-2:0.608
chr3	179033891	179034023	reg1002357.p1	15.400	+	AK304837 NM_001163677 NM_171828	-49144	-	BC082272 NM_171829	-56279	-	NM_171830	-64313	-	TSC_hg19_v1_chr3_+_179040818 BC026181	6909	+	AB097862 AF003924 NM_016331	7593	+	BC040557 NM_033540 TSC_hg19_v1_chr3_+_179065522 BC020661 AB043589 AK000700 AK314306	31557	+	AK304837|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_001163677|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_171828|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##BC082272|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_171829|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_171830|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##BC026181|ZNF639|51193|zinc finger protein 639##AB097862|ZNF639|51193|zinc finger protein 639##AF003924|ZNF639|51193|zinc finger protein 639##NM_016331|ZNF639|51193|zinc finger protein 639##BC040557|MFN1|55669|mitofusin 1##NM_033540|MFN1|55669|mitofusin 1##BC020661|MFN1|55669|mitofusin 1##AB043589|MFN1|55669|mitofusin 1##AK000700|MFN1|55669|mitofusin 1##AK314306|MFN1|55669|mitofusin 1	0.011558	
chr1	95320074	95320199	reg1002664.p1	15.395	+	TSC_hg19_v1_chr1_+_95286194 AK300193	-33937	+	NM_152369 TSC_hg19_v1_chr1_+_95286156 BC053877	-33994	+	NM_001114106 AK303906 TSC_hg19_v1_chr1_+_95285935 BC033858 AX721168 AK301288 AK316123 AK313574	-34182	+	CR541848 CU692978 DQ893013 DQ896258 TSC_hg19_v1_chr1_-_95392498	72337	-	TSC_hg19_v1_chr1_-_95392690 S80562 BC025372 AK312370 AK298145 NM_001839	72504	-	TSC_hg19_v1_chr1_-_95538474 BC011706 AK289395 NM_144988	218350	-	AK300193|SLC44A3|126969|solute carrier family 44, member 3##NM_152369|SLC44A3|126969|solute carrier family 44, member 3##BC053877|SLC44A3|126969|solute carrier family 44, member 3##NM_001114106|SLC44A3|126969|solute carrier family 44, member 3##AK303906|SLC44A3|126969|solute carrier family 44, member 3##BC033858|SLC44A3|126969|solute carrier family 44, member 3##AK301288|SLC44A3|126969|solute carrier family 44, member 3##AK316123|SLC44A3|126969|solute carrier family 44, member 3##AK313574|SLC44A3|126969|solute carrier family 44, member 3##CR541848|CNN3|1266|calponin 3, acidic##DQ893013|CNN3|1266|calponin 3, acidic##DQ896258|CNN3|1266|calponin 3, acidic##S80562|CNN3|1266|calponin 3, acidic##BC025372|CNN3|1266|calponin 3, acidic##AK312370|CNN3|1266|calponin 3, acidic##AK298145|CNN3|1266|calponin 3, acidic##NM_001839|CNN3|1266|calponin 3, acidic##BC011706|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##AK289395|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##NM_144988|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)	0.948592	CTCF.p2:-6:0.949
chr13	49995718	49995847	reg1003033.p1	15.394	+	NM_030925	-20048	-	NM_001193478 NM_030911 TSC_hg19_v1_chr13_+_49822076 BC022801 BC092434 AK312835 BC032889 BC070238 AK297400 BC009562 AY027525 BC048092 BC125202 BC125203	-173693	+	AB463896 AY603964 NM_001507	-201310	+	TSC_hg19_v1_chr13_-_50018201 AY211923 AY288977 BX647518 NM_001079670	22399	-	TSC_hg19_v1_chr13_+_50018457 NM_031915 AK308220 AF334407	22688	+	TSC_hg19_v1_chr13_+_50018555 AK308354	22801	+	NM_030925|CAB39L|81617|calcium binding protein 39-like##NM_001193478|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##NM_030911|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC022801|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC092434|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AK312835|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC032889|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC070238|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AK297400|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC009562|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AY027525|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC048092|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC125202|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC125203|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AY603964|MLNR|2862|motilin receptor##NM_001507|MLNR|2862|motilin receptor##AY211923|CAB39L|81617|calcium binding protein 39-like##AY288977|CAB39L|81617|calcium binding protein 39-like##BX647518|CAB39L|81617|calcium binding protein 39-like##NM_001079670|CAB39L|81617|calcium binding protein 39-like##NM_031915|SETDB2|83852|SET domain, bifurcated 2##AK308220|SETDB2|83852|SET domain, bifurcated 2##AF334407|SETDB2|83852|SET domain, bifurcated 2##AK308354|SETDB2|83852|SET domain, bifurcated 2	0.071888	
chr4	106442106	106442248	reg1002499.p1	15.394	+	AM393754 AM393796 TSC_hg19_v1_chr4_-_106395220 AK294097 AL136655 AF161473 BC039462 BC008246 BC035569 BC012903 BC022803 AK289607 CU691190 AM393483 EU831414 EU831507 BC001065 BC021071 AB528841 AK297096 AK299125 AK299501 BC057219 AK000466 AB026722 AF217187 NM_006903 NM_176866 NM_176867 NM_176869	-46987	-	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	-374133	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	-374366	+	AK000191 NM_001242729 NM_017700 BC105695	31605	+	TSC_hg19_v1_chr4_-_106629819 BC014442 AK314939 NM_001142471 NM_020395	187664	-	TSC_hg19_v1_chr4_+_106629965 AK303547 BX648355 NM_024751 AK023335 AK225563	187796	+	AM393754|PPA2|27068|pyrophosphatase (inorganic) 2##AM393796|PPA2|27068|pyrophosphatase (inorganic) 2##AK294097|PPA2|27068|pyrophosphatase (inorganic) 2##AL136655|PPA2|27068|pyrophosphatase (inorganic) 2##AF161473|PPA2|27068|pyrophosphatase (inorganic) 2##BC039462|PPA2|27068|pyrophosphatase (inorganic) 2##BC008246|PPA2|27068|pyrophosphatase (inorganic) 2##BC035569|PPA2|27068|pyrophosphatase (inorganic) 2##BC012903|PPA2|27068|pyrophosphatase (inorganic) 2##BC022803|PPA2|27068|pyrophosphatase (inorganic) 2##AK289607|PPA2|27068|pyrophosphatase (inorganic) 2##AM393483|PPA2|27068|pyrophosphatase (inorganic) 2##EU831414|PPA2|27068|pyrophosphatase (inorganic) 2##EU831507|PPA2|27068|pyrophosphatase (inorganic) 2##AK299125|PPA2|27068|pyrophosphatase (inorganic) 2##BC057219|PPA2|27068|pyrophosphatase (inorganic) 2##AK000466|PPA2|27068|pyrophosphatase (inorganic) 2##AB026722|PPA2|27068|pyrophosphatase (inorganic) 2##AF217187|PPA2|27068|pyrophosphatase (inorganic) 2##NM_006903|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176866|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176867|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176869|PPA2|27068|pyrophosphatase (inorganic) 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_001242729|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC014442|INTS12|57117|integrator complex subunit 12##AK314939|INTS12|57117|integrator complex subunit 12##NM_001142471|INTS12|57117|integrator complex subunit 12##NM_020395|INTS12|57117|integrator complex subunit 12##AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	0.92597	CTCF.p2:0:0.926
chr7	82201666	82201780	reg1001742.p1	15.393	+	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	-128643	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	-128877	-	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-802349	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	590146	-	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	590513	-	AK303925 NM_001178129	1069023	-	NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	0.999511	CTCF.p2:8:1.000
chr12	53607215	53607331	reg1001691.p2	15.392	+	TSC_hg19_v1_chr12_-_53601066 AK300960	-6201	-	M68892 NM_000889 S80335 TSC_hg19_v1_chr12_-_53601036 AK298239 AK301523 AK311703	-6251	-	TSC_hg19_v1_chr12_-_53575136 AK296885	-32142	-	HQ692829 TSC_hg19_v1_chr12_-_53613945 AK316259 M32074 AK297801	6689	-	TSC_hg19_v1_chr12_-_53614137 AK301057 AK297277 NM_001042728 NM_001243732	6885	-	TSC_hg19_v1_chr12_-_53625973 BC064524 AK297023 M24857 L12060 BC072462 AK297110 AK290588 NM_000966 NM_001243730 NM_001243731	18663	-	AK300960|ITGB7|3695|integrin, beta 7##M68892|ITGB7|3695|integrin, beta 7##NM_000889|ITGB7|3695|integrin, beta 7##S80335|ITGB7|3695|integrin, beta 7##AK298239|ITGB7|3695|integrin, beta 7##AK301523|ITGB7|3695|integrin, beta 7##AK311703|ITGB7|3695|integrin, beta 7##AK296885|CSAD|51380|cysteine sulfinic acid decarboxylase##HQ692829|RARG|5916|retinoic acid receptor, gamma##AK316259|RARG|5916|retinoic acid receptor, gamma##M32074|RARG|5916|retinoic acid receptor, gamma##AK297801|RARG|5916|retinoic acid receptor, gamma##AK301057|RARG|5916|retinoic acid receptor, gamma##AK297277|RARG|5916|retinoic acid receptor, gamma##NM_001042728|RARG|5916|retinoic acid receptor, gamma##NM_001243732|RARG|5916|retinoic acid receptor, gamma##BC064524|RARG|5916|retinoic acid receptor, gamma##AK297023|RARG|5916|retinoic acid receptor, gamma##M24857|RARG|5916|retinoic acid receptor, gamma##L12060|RARG|5916|retinoic acid receptor, gamma##BC072462|RARG|5916|retinoic acid receptor, gamma##AK297110|RARG|5916|retinoic acid receptor, gamma##AK290588|RARG|5916|retinoic acid receptor, gamma##NM_000966|RARG|5916|retinoic acid receptor, gamma##NM_001243730|RARG|5916|retinoic acid receptor, gamma##NM_001243731|RARG|5916|retinoic acid receptor, gamma	0.908258	CTCF.p2:-9:0.908
chr22	19958138	19958249	reg1001889.p1	15.392	+	AB462972 BT007125 CR456997 CU012983 CU013271 CU680120 DQ893411 DQ896732 FJ410132 TSC_hg19_v1_chr22_+_19950078 NM_007310 EF217321 EF217322 EF212883 FJ410131 CU674210	-8011	+	NM_001135162 BC100018	-19145	+	NM_001135161 AK129492	-19677	+	TSC_hg19_v1_chr22_-_20004347 NM_001670 U51269	46130	-	TSC_hg19_v1_chr22_+_20008632 AK316056 BC041339 NM_152906 AK301054 AK301366 AK311676	50424	+	AK297922 AK298593 TSC_hg19_v1_chr22_+_20008634 AK297075 AK316020 AK092484 AX747566 CR627452	50450	+	BT007125|COMT|1312|catechol-O-methyltransferase##CR456997|COMT|1312|catechol-O-methyltransferase##CU012983|COMT|1312|catechol-O-methyltransferase##CU013271|COMT|1312|catechol-O-methyltransferase##DQ893411|COMT|1312|catechol-O-methyltransferase##DQ896732|COMT|1312|catechol-O-methyltransferase##FJ410132|COMT|1312|catechol-O-methyltransferase##NM_007310|COMT|1312|catechol-O-methyltransferase##EF217321|COMT|1312|catechol-O-methyltransferase##EF217322|COMT|1312|catechol-O-methyltransferase##FJ410131|COMT|1312|catechol-O-methyltransferase##NM_001135162|COMT|1312|catechol-O-methyltransferase##BC100018|COMT|1312|catechol-O-methyltransferase##NM_001135161|COMT|1312|catechol-O-methyltransferase##NM_001670|ARVCF|421|armadillo repeat gene deleted in velocardiofacial syndrome##U51269|ARVCF|421|armadillo repeat gene deleted in velocardiofacial syndrome##AK316056|C22orf25|128989|chromosome 22 open reading frame 25##BC041339|C22orf25|128989|chromosome 22 open reading frame 25##NM_152906|C22orf25|128989|chromosome 22 open reading frame 25##AK301054|C22orf25|128989|chromosome 22 open reading frame 25##AK301366|C22orf25|128989|chromosome 22 open reading frame 25##AK311676|C22orf25|128989|chromosome 22 open reading frame 25##AK297922|C22orf25|128989|chromosome 22 open reading frame 25##AK298593|C22orf25|128989|chromosome 22 open reading frame 25##AK297075|C22orf25|128989|chromosome 22 open reading frame 25##AK316020|C22orf25|128989|chromosome 22 open reading frame 25##AK092484|C22orf25|128989|chromosome 22 open reading frame 25##CR627452|C22orf25|128989|chromosome 22 open reading frame 25	0.959042	CTCF.p2:-14:0.915
chr4	171180863	171181031	reg1002091.p1	15.392	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-169533	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-169749	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-233442	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	1553697	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	2909005	+	BC043556 TSC_hg19_v1_chr4_-_174090314	2909363	-	BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	1.972056	CTCF.p2:22:0.993	CTCF.p2:-90:0.979
chr5	173472547	173472679	reg1001073.p1	15.392	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	-56423	+	TSC_hg19_v1_chr5_+_173315343 NM_030627	-157235	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-428940	-	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	98	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	139	+	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	678999	+	NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2	0.688358	CTCF.p2:-19:0.688
chr6	160877082	160877222	reg1002839.p1	15.390	+	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	-107758	+	CU689064 BC039899 AK290787 X98333 AB075951 BC030978 NM_003058	-197277	-	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	-334238	+	NM_005577	210254	-	NM_000301 NM_001168338 AK308036 AK312966 AK298338 X05199 M74220 BC060513	246109	+	TSC_hg19_v1_chr6_+_161412797 BC146770 D86968	535590	+	BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##BC039899|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AK290787|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##X98333|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AB075951|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC030978|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003058|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_005577|LPA|4018|lipoprotein, Lp(a)##NM_000301|PLG|5340|plasminogen##NM_001168338|PLG|5340|plasminogen##AK308036|PLG|5340|plasminogen##AK312966|PLG|5340|plasminogen##AK298338|PLG|5340|plasminogen##X05199|PLG|5340|plasminogen##M74220|PLG|5340|plasminogen##BC060513|PLG|5340|plasminogen##BC146770|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##D86968|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4	0.995991	CTCF.p2:16:0.996
chr12	14783166	14783299	reg1002603.p1	15.389	+	NM_024829 TSC_hg19_v1_chr12_-_14720806	-62428	-	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	-62623	-	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	-244960	+	BC136544 BC136545 M73489 TSC_hg19_v1_chr12_-_14849534 S57551 AK310034 NM_004963	66253	-	AB527963 TSC_hg19_v1_chr12_-_14924064 AK311916 BC020884 NM_175054	140809	-	NM_177925 TSC_hg19_v1_chr12_+_14927302	144053	+	NM_024829|PLBD1|79887|phospholipase B domain containing 1##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##BC136544|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##BC136545|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##M73489|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##S57551|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##AK310034|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##NM_004963|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##BC020884|HIST4H4|121504|histone cluster 4, H4##NM_175054|HIST4H4|121504|histone cluster 4, H4##NM_177925|H2AFJ|55766|H2A histone family, member J	0.15094	
chr2	203696384	203696521	reg1002390.p1	15.389	+	AB053315 TSC_hg19_v1_chr2_+_203500263	-196215	+	TSC_hg19_v1_chr2_+_203499820 NM_173511	-196593	+	TSC_hg19_v1_chr2_+_203499703 AK096090	-196763	+	AK055978 AB053316 TSC_hg19_v1_chr2_-_203736166	39626	-	TSC_hg19_v1_chr2_-_203736185 NM_178231	39737	-	TSC_hg19_v1_chr2_-_203736227 AL833904 BC063876 NM_138468	39844	-	AB053315|FAM117B|150864|family with sequence similarity 117, member B##NM_173511|FAM117B|150864|family with sequence similarity 117, member B##AK096090|FAM117B|150864|family with sequence similarity 117, member B##AK055978|ICA1L|130026|islet cell autoantigen 1,69kDa-like##AB053316|ICA1L|130026|islet cell autoantigen 1,69kDa-like##NM_178231|ICA1L|130026|islet cell autoantigen 1,69kDa-like##AL833904|ICA1L|130026|islet cell autoantigen 1,69kDa-like##BC063876|ICA1L|130026|islet cell autoantigen 1,69kDa-like##NM_138468|ICA1L|130026|islet cell autoantigen 1,69kDa-like	0.990687	CTCF.p2:-11:0.991
chr6	43111344	43111469	reg1001712.p1	15.388	+	TSC_hg19_v1_chr6_+_43044048 NM_002821 NM_152880 NM_152881 NM_152882 U33635 BC071557 BC002377 BC014626 AK292589 AF531868 AF531869 AF531870 AF531871 AF531872 U40271 AB209350 AK291016	-67329	+	NM_201522 AK127894	-83168	+	AK094102 NM_201523 AK055293 BX640717	-83776	+	NM_003131 TSC_hg19_v1_chr6_+_43139027 BC052572 J03161	27647	+	TSC_hg19_v1_chr6_+_43139192 BC048211	27787	+	TSC_hg19_v1_chr6_+_43139204 AB209128 AB464198	27887	+	NM_002821|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152880|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152881|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152882|PTK7|5754|PTK7 protein tyrosine kinase 7##U33635|PTK7|5754|PTK7 protein tyrosine kinase 7##BC071557|PTK7|5754|PTK7 protein tyrosine kinase 7##BC002377|PTK7|5754|PTK7 protein tyrosine kinase 7##BC014626|PTK7|5754|PTK7 protein tyrosine kinase 7##AK292589|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531868|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531869|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531870|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531871|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531872|PTK7|5754|PTK7 protein tyrosine kinase 7##U40271|PTK7|5754|PTK7 protein tyrosine kinase 7##AB209350|PTK7|5754|PTK7 protein tyrosine kinase 7##AK291016|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_201522|KLC4|89953|kinesin light chain 4##AK127894|KLC4|89953|kinesin light chain 4##AK094102|KLC4|89953|kinesin light chain 4##NM_201523|KLC4|89953|kinesin light chain 4##AK055293|KLC4|89953|kinesin light chain 4##BX640717|KLC4|89953|kinesin light chain 4##NM_003131|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC052572|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##J03161|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC048211|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##AB209128|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)	0.413343	CTCF.p2:6:0.413
chr1	19147370	19147504	reg1002295.p1	15.387	+	NM_001135254 NM_002584 NM_013945 X96743	-189938	+	NM_152375	-340014	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	-713160	+	NM_152232 AB527225	38718	-	AK294552 NM_001161504	69947	-	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	81717	-	NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##NM_152375|KLHDC7A|127707|kelch domain containing 7A##AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1	0.937149	CTCF.p2:9:0.901
chr4	1345745	1345880	reg1002480.p1	15.387	+	TSC_hg19_v1_chr4_+_1341031 BC110331 AB040963 NM_020894 BC140901	-4544	+	TSC_hg19_v1_chr4_+_1283693 AK296174 AK022515 AY236486 AK308901 AF084928 BC006470 AY189687 BT006957	-62106	+	TSC_hg19_v1_chr4_+_1283678 BC001225 NM_001017405 NM_005882 AK001088 AK022586 AK094253 AK300572	-62142	+	AK126919 NM_175918	39527	+	BC070112 NM_001013622 BC042071 NM_001174070	340040	-	BT007433 CU677395 DQ892370 DQ895579 Z71188 NM_006527 U75679 BC014908 BC015703 AK315635 TSC_hg19_v1_chr4_-_1714047 AK300826 AK091735 AX747152 AK093314	368180	-	BC110331|KIAA1530|57654|KIAA1530##AB040963|KIAA1530|57654|KIAA1530##NM_020894|KIAA1530|57654|KIAA1530##BC140901|KIAA1530|57654|KIAA1530##AK296174|MAEA|10296|macrophage erythroblast attacher##AK022515|MAEA|10296|macrophage erythroblast attacher##AY236486|MAEA|10296|macrophage erythroblast attacher##AK308901|MAEA|10296|macrophage erythroblast attacher##AF084928|MAEA|10296|macrophage erythroblast attacher##BC006470|MAEA|10296|macrophage erythroblast attacher##AY189687|MAEA|10296|macrophage erythroblast attacher##BT006957|MAEA|10296|macrophage erythroblast attacher##BC001225|MAEA|10296|macrophage erythroblast attacher##NM_001017405|MAEA|10296|macrophage erythroblast attacher##NM_005882|MAEA|10296|macrophage erythroblast attacher##AK001088|MAEA|10296|macrophage erythroblast attacher##AK022586|MAEA|10296|macrophage erythroblast attacher##AK094253|MAEA|10296|macrophage erythroblast attacher##AK300572|MAEA|10296|macrophage erythroblast attacher##AK126919|CRIPAK|285464|cysteine-rich PAK1 inhibitor##NM_175918|CRIPAK|285464|cysteine-rich PAK1 inhibitor##BC070112|FAM53A|152877|family with sequence similarity 53, member A##NM_001013622|FAM53A|152877|family with sequence similarity 53, member A##BC042071|FAM53A|152877|family with sequence similarity 53, member A##NM_001174070|FAM53A|152877|family with sequence similarity 53, member A##BT007433|SLBP|7884|stem-loop binding protein##DQ892370|SLBP|7884|stem-loop binding protein##DQ895579|SLBP|7884|stem-loop binding protein##Z71188|SLBP|7884|stem-loop binding protein##NM_006527|SLBP|7884|stem-loop binding protein##U75679|SLBP|7884|stem-loop binding protein##BC014908|SLBP|7884|stem-loop binding protein##BC015703|SLBP|7884|stem-loop binding protein##AK315635|SLBP|7884|stem-loop binding protein##AK300826|SLBP|7884|stem-loop binding protein##AK091735|SLBP|7884|stem-loop binding protein##AK093314|SLBP|7884|stem-loop binding protein	0.999199	CTCF.p2:9:0.999
chr7	7143128	7143247	reg1001800.p1	15.387	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-277289	-	AK296026 CU679629 AK000993 TSC_hg19_v1_chr7_-_6865849	-277349	-	AK314983 BC034495 NM_001099697 NM_173565	-349448	+	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	79060	+	BC136892 BC144431 AJ890451 NM_001037763	432267	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	463401	+	BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK296026|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK000993|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)	0.958645	CTCF.p2:2:0.959
chr3	131748243	131748380	reg1002760.p1	15.386	+	TSC_hg19_v1_chr3_-_131221816 CR456720 CU678442 BC002345 X06323 BC003375 AK301377 AK296626 NM_007208	-526557	-	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	-647660	+	TSC_hg19_v1_chr3_+_131080737 AK000532 BC015593	-667568	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	5529	-	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	287927	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	287977	+	CR456720|MRPL3|11222|mitochondrial ribosomal protein L3##X06323|MRPL3|11222|mitochondrial ribosomal protein L3##BC003375|MRPL3|11222|mitochondrial ribosomal protein L3##AK301377|MRPL3|11222|mitochondrial ribosomal protein L3##AK296626|MRPL3|11222|mitochondrial ribosomal protein L3##NM_007208|MRPL3|11222|mitochondrial ribosomal protein L3##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK000532|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##BC015593|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate	0.654561	CTCF.p2:9:0.655
chr6	113627885	113628025	reg1002852.p1	15.386	+	AK122906 NM_001013734	-959424	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1052060	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-1052150	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	550779	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	664317	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	664381	-	AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2	0.999658	CTCF.p2:-11:1.000
chr2	38808822	38808968	reg1002551.p1	15.385	+	TSC_hg19_v1_chr2_-_38604430 NM_001135673 NM_022374	-204464	-	TSC_hg19_v1_chr2_-_38604411 BC053508 AK026946 AK225190 AK303985 AK308894	-204491	-	AK316179 TSC_hg19_v1_chr2_-_38525609	-283326	-	TSC_hg19_v1_chr2_-_38829619 CU675994	20796	-	TSC_hg19_v1_chr2_-_38830012 AY236962	21097	-	TSC_hg19_v1_chr2_-_38830065 AY236963 BC017480 AK291462	21145	-	NM_001135673|ATL2|64225|atlastin GTPase 2##NM_022374|ATL2|64225|atlastin GTPase 2##BC053508|ATL2|64225|atlastin GTPase 2##AK026946|ATL2|64225|atlastin GTPase 2##AK225190|ATL2|64225|atlastin GTPase 2##AK303985|ATL2|64225|atlastin GTPase 2##AK308894|ATL2|64225|atlastin GTPase 2##AK316179|ATL2|64225|atlastin GTPase 2##AY236962|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	0.998087	CTCF.p2:-14:0.998
chr8	9195892	9196030	reg1002780.p1	15.385	+	TSC_hg19_v1_chr8_-_9009055 AK096119 NM_001201329	-186861	-	TSC_hg19_v1_chr8_-_9008167 BC043388 AK024067 NM_024607	-187783	-	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	-335456	+	TSC_hg19_v1_chr8_+_9413421 BC098394	217444	+	TSC_hg19_v1_chr8_+_9413423 AK302031	217462	+	TSC_hg19_v1_chr8_+_9413439 BC023578 AF082556 NM_003747 AK301798	217520	+	AK096119|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_001201329|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##BC043388|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK024067|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_024607|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1##BC098394|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK302031|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##BC023578|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AF082556|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##NM_003747|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK301798|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	0.036523	
chr7	28893903	28894033	reg1001486.p1	15.384	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	-168285	+	AK292916 TSC_hg19_v1_chr7_+_28530784	-363203	+	L05911 NM_004904	-418735	+	CU690330 TSC_hg19_v1_chr7_-_28997732	103729	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	103961	-	AK293803 NM_014817 TSC_hg19_v1_chr7_-_28998036	104064	-	L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5##AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats##NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats	0.209942	CTCF.p2:17:0.210
chr5	174220831	174220943	reg1001870.p2	15.382	+	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	-69275	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-748135	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	-748176	+	NM_000794	650275	-	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	684675	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	864151	+	NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##NM_000794|DRD1|1812|dopamine receptor D1##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2	0.0	
chr19	16528615	16528769	reg1002718.p1	15.380	+	AF134053 TSC_hg19_v1_chr19_+_16435803	-92923	+	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	-93051	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	-219942	+	BC142662 AB527825 AF110265 BC131590 BC037558 TSC_hg19_v1_chr19_-_16582771 AB015346 NM_021235 BC067114 BC051873 BC142716 AK296473 AK297428 AK024166	54084	-	TSC_hg19_v1_chr19_-_16582810 AK291359	54160	-	CU677059 AB576176 DQ890903 DQ894056 AK058084 BC014595 NM_145046	78278	-	AF134053|KLF2|10365|Kruppel-like factor 2 (lung)##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)##AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC142662|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AF110265|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC131590|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC037558|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB015346|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##NM_021235|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC067114|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC051873|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC142716|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK296473|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK297428|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK024166|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK291359|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB576176|CALR3|125972|calreticulin 3##DQ890903|CALR3|125972|calreticulin 3##DQ894056|CALR3|125972|calreticulin 3##AK058084|CALR3|125972|calreticulin 3##BC014595|CALR3|125972|calreticulin 3##NM_145046|CALR3|125972|calreticulin 3	0.998823	CTCF.p2:8:0.999
chr1	3827477	3827591	reg1002472.p1	15.379	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-10689	-	TSC_hg19_v1_chr1_-_3816816 CU688284 BC035643 BC047611	-10771	-	BC048797 NM_004402	-53690	+	TSC_hg19_v1_chr1_+_4714668 AF175409	887195	+	AY282806 NM_001042478 NM_018836	887570	+	NM_001199861	2224823	+	BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##BC035643|C1orf174|339448|chromosome 1 open reading frame 174##BC047611|C1orf174|339448|chromosome 1 open reading frame 174##BC048797|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)##NM_004402|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)##AF175409|AJAP1|55966|adherens junctions associated protein 1##AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2	0.845068	CTCF.p2:-8:0.845
chr12	1905294	1905418	reg1001086.p1	15.378	+	TSC_hg19_v1_chr12_+_1800235 AK128511 AK127111 BC051858 NM_024551	-105139	+	AK127196 TSC_hg19_v1_chr12_+_1800187	-105190	+	BC001749 NM_032642	-166945	+	BC048288 TSC_hg19_v1_chr12_-_1920907 AK301234	15568	-	NM_001039029 NM_001163925 NM_001163926	24076	+	TSC_hg19_v1_chr12_+_1929658 AK125402 AK095610 BC146894 BC146910 AK124687	24403	+	AK128511|ADIPOR2|79602|adiponectin receptor 2##BC051858|ADIPOR2|79602|adiponectin receptor 2##NM_024551|ADIPOR2|79602|adiponectin receptor 2##AK127196|ADIPOR2|79602|adiponectin receptor 2##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC048288|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##AK301234|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##NM_001039029|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##NM_001163925|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##NM_001163926|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK125402|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK095610|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##BC146894|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##BC146910|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK124687|LRTM2|654429|leucine-rich repeats and transmembrane domains 2	0.999711	CTCF.p2:1:1.000
chr14	68050897	68051024	reg1002699.p1	15.378	+	AK307428 NM_020715 TSC_hg19_v1_chr14_+_68000028 AB033026 BC146787	-50987	+	NM_182526 TSC_hg19_v1_chr14_-_67982162 AK090706 AX746582	-68850	-	TSC_hg19_v1_chr14_-_67878872 BC001226	-172089	-	BT006804 CU678574 BC071849 BC004100 L19783 AK314108 AK293584 NM_004569	16007	-	TSC_hg19_v1_chr14_+_68086582 BC029050 NM_001172	35629	+	AY074489 BC008464 TSC_hg19_v1_chr14_+_68086636	35676	+	AK307428|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##NM_020715|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##AB033026|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##BC146787|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##NM_182526|TMEM229B|161145|transmembrane protein 229B##AK090706|TMEM229B|161145|transmembrane protein 229B##BC001226|PLEK2|26499|pleckstrin 2##BT006804|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC071849|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC004100|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##L19783|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##AK314108|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##NM_004569|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC029050|ARG2|384|arginase, type II##NM_001172|ARG2|384|arginase, type II##AY074489|ARG2|384|arginase, type II##BC008464|ARG2|384|arginase, type II	0.993367	CTCF.p2:-12:0.993
chr1	44229239	44229372	reg1001636.p1	15.377	+	AK301829 AY051143 NM_006279 NM_174963 NM_174964 NM_174965 NM_174966 NM_174967 NM_174968 NM_174969 NM_174970 NM_174971 TSC_hg19_v1_chr1_+_44173217 BC050380	-56087	+	TSC_hg19_v1_chr1_-_44173037 BC094867	-56282	-	BC002558 TSC_hg19_v1_chr1_+_44115828 AB014577	-113461	+	AF120274 NM_001136215 NM_057090 NM_057091	169686	+	TSC_hg19_v1_chr1_+_44412483 NM_014652	183156	+	TSC_hg19_v1_chr1_+_44412625 AB018267	183305	+	AK301829|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##AY051143|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_006279|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174963|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174964|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174965|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174966|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174967|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174968|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174969|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174970|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174971|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC050380|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC094867|LOC100132774|100132774|uncharacterized LOC100132774##BC002558|KDM4A|9682|lysine (K)-specific demethylase 4A##AB014577|KDM4A|9682|lysine (K)-specific demethylase 4A##AF120274|ARTN|9048|artemin##NM_001136215|ARTN|9048|artemin##NM_057090|ARTN|9048|artemin##NM_057091|ARTN|9048|artemin##NM_014652|IPO13|9670|importin 13##AB018267|IPO13|9670|importin 13	1.018294	CTCF.p2:-11:0.993
chr17	73744003	73744123	reg1002265.p1	15.377	+	BC109238 TSC_hg19_v1_chr17_+_73723807	-20292	+	NM_001005619 X52186 AF011375	-23284	+	BC118916 TSC_hg19_v1_chr17_+_73717603 AB208913	-26462	+	BT007005 CU674592 TSC_hg19_v1_chr17_-_73761274 U26401 AK316181 AK314890 AK303748 BC001166 AK130064 AK310203 NM_000154 AK303832	17218	-	L05088 TSC_hg19_v1_chr17_-_73774461	30392	-	BC108701 AF218029 BC001124 BC006497 BC012813 BC017558 TSC_hg19_v1_chr17_-_73775861 BX647280 AK130772 AK304607 AK312762 BX537379 NM_005324	31778	-	BC109238|ITGB4|3691|integrin, beta 4##NM_001005619|ITGB4|3691|integrin, beta 4##X52186|ITGB4|3691|integrin, beta 4##AF011375|ITGB4|3691|integrin, beta 4##BC118916|ITGB4|3691|integrin, beta 4##AB208913|ITGB4|3691|integrin, beta 4##BT007005|GALK1|2584|galactokinase 1##U26401|GALK1|2584|galactokinase 1##AK316181|GALK1|2584|galactokinase 1##AK314890|GALK1|2584|galactokinase 1##AK303748|GALK1|2584|galactokinase 1##BC001166|GALK1|2584|galactokinase 1##AK130064|GALK1|2584|galactokinase 1##AK310203|GALK1|2584|galactokinase 1##NM_000154|GALK1|2584|galactokinase 1##AK303832|GALK1|2584|galactokinase 1##BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)##AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)##NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)	0.984799	CTCF.p2:16:0.985
chr2	232790059	232790202	reg1002938.p1	15.376	+	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-139014	+	TSC_hg19_v1_chr2_+_232646442 AK307486	-143693	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	-144205	-	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	903	-	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	36230	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	453253	+	AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK307486|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental	0.996142	CTCF.p2:-7:0.996
chr3	179646964	179647097	reg1002524.p1	15.376	+	TSC_hg19_v1_chr3_+_179370901 NM_003940 U75362 BC016146 AK290338 AM393315 AM393392 AM393610 AM393780 DQ892472 DQ895684	-276135	+	TSC_hg19_v1_chr3_+_179322594 NM_001199957 NM_001199958 NM_002492 BX648034 BC005271 BC009796 AK313822 AF047181 BC093071 BC017909 CU679497	-324437	+	AY212270 BC032522 TSC_hg19_v1_chr3_-_179322427 BC021575 NM_020409 NM_177988	-324608	-	AB032593 NM_016559 AB032592 TSC_hg19_v1_chr3_-_179754937 AK299633 AK294501 AK314283 BC036183	107696	-	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	672973	+	AB075860 TSC_hg19_v1_chr3_+_180320970	673933	+	NM_003940|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##U75362|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##BC016146|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AK290338|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393315|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393392|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393610|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393780|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ892472|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ895684|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##NM_001199957|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_001199958|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AY212270|MRPL47|57129|mitochondrial ribosomal protein L47##BC032522|MRPL47|57129|mitochondrial ribosomal protein L47##BC021575|MRPL47|57129|mitochondrial ribosomal protein L47##NM_020409|MRPL47|57129|mitochondrial ribosomal protein L47##NM_177988|MRPL47|57129|mitochondrial ribosomal protein L47##AB032593|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_016559|PEX5L|51555|peroxisomal biogenesis factor 5-like##AB032592|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK299633|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK294501|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK314283|PEX5L|51555|peroxisomal biogenesis factor 5-like##BC036183|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##AB075860|TTC14|151613|tetratricopeptide repeat domain 14	0.997332	CTCF.p2:1:0.997
chr5	151522533	151522661	reg1002638.p1	15.375	+	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	-218235	-	TSC_hg19_v1_chr5_+_151151662 X78262	-370933	+	TSC_hg19_v1_chr5_+_151151516 U32519 BC108278	-371068	+	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	262154	-	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	1347668	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	1895860	-	AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##X78262|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##U32519|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##BC108278|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2	0.999671	CTCF.p2:1:1.000
chr7	31528324	31528453	reg1002137.p1	15.374	+	AK055238 AF248954 NM_022728	-147866	-	TSC_hg19_v1_chr7_+_31092073 NM_001118 NM_001199635 NM_001199636 NM_001199637 AK290046 AK226138	-436284	+	L01406 L09237 NM_000823 AY557192	-524729	+	AK128026 NM_194300	28589	+	NM_001145123 NM_006658	198242	+	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	582117	-	AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##NM_001118|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199635|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199636|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199637|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK290046|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK226138|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##L01406|GHRHR|2692|growth hormone releasing hormone receptor##L09237|GHRHR|2692|growth hormone releasing hormone receptor##NM_000823|GHRHR|2692|growth hormone releasing hormone receptor##AY557192|GHRHR|2692|growth hormone releasing hormone receptor##AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129##NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	0.99717	CTCF.p2:19:0.997
chr19	30207564	30207675	reg1001704.p5	15.373	+	TSC_hg19_v1_chr19_-_30206402 NM_031448	-1197	-	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	-1527	-	TSC_hg19_v1_chr19_+_30156375 AK225814	-51198	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	95282	+	BC026184 NM_001252641	206931	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	225663	+	NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone	0.897862	CTCF.p2:10:0.898
chr22	37963410	37963548	reg1002083.p1	15.372	+	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	-7006	+	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	-48172	-	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	-81134	-	M87842 BC059782 NM_006498 CR456512	12521	-	TSC_hg19_v1_chr22_+_38004480 NM_001001560 NM_001001561 NM_001172687 NM_013365 AK075256	41083	+	TSC_hg19_v1_chr22_+_38004843 CR456493 BC010917 AK290548 BC029388 AK225157 BC044629 AF190862 AF233521 AF218584	41291	+	NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10##CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##M87842|LGALS2|3957|lectin, galactoside-binding, soluble, 2##BC059782|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_006498|LGALS2|3957|lectin, galactoside-binding, soluble, 2##CR456512|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_001001560|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001001561|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001172687|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_013365|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK075256|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CR456493|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC010917|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK290548|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC029388|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK225157|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC044629|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF190862|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF233521|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF218584|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1	0.999964	CTCF.p2:19:1.000
chr1	109055249	109055370	reg1001670.p2	15.371	+	NM_001143987 NM_001143988 BC125161 BC125162	-62387	+	BC125161 BC125162 AK057395 AK316438 AK302318 NM_001143989	-268627	-	TSC_hg19_v1_chr1_+_108742987 AK130480	-312300	+	BC127898 BC150530 NM_001010883 BC140863 BC140865	47733	+	BC088366 TSC_hg19_v1_chr1_-_109203698 NM_001102592 BC012198	148459	-	TSC_hg19_v1_chr1_-_109204071 AK311542 AK310152 AK055087 NM_144584	148782	-	NM_001143987|NBPF6|653149|neuroblastoma breakpoint family, member 6##NM_001143988|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4##NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4##BC127898|FAM102B|284611|family with sequence similarity 102, member B##BC150530|FAM102B|284611|family with sequence similarity 102, member B##NM_001010883|FAM102B|284611|family with sequence similarity 102, member B##BC140863|FAM102B|284611|family with sequence similarity 102, member B##BC140865|FAM102B|284611|family with sequence similarity 102, member B##BC088366|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_001102592|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##BC012198|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK311542|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK310152|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK055087|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_144584|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)	0.124535	
chr22	50714750	50714879	reg1000614.p2	15.370	+	AF001008 CU013114 CU013402 AB463125 DQ891728 DQ894905 CR456514 U92268 AF001174 Y14440 AF031135 U53442 AK291845 BC027933 NM_002751 AK299745	-6058	-	CU677413 CU013115 CU013403 DQ892787 DQ896034 AB587470 X79483 AK308768 CR456515 BC015741 NM_002969 TSC_hg19_v1_chr22_-_50700113 Y10487	-14706	-	AK307421 TSC_hg19_v1_chr22_-_50699740 AK294422 BX640648 AK289770	-15075	-	TSC_hg19_v1_chr22_-_50720334 AK074932 AK126394	5534	-	TSC_hg19_v1_chr22_-_50720982 AK056543	6161	-	NM_012401	31186	-	AF001008|MAPK11|5600|mitogen-activated protein kinase 11##CU013114|MAPK11|5600|mitogen-activated protein kinase 11##CU013402|MAPK11|5600|mitogen-activated protein kinase 11##DQ891728|MAPK11|5600|mitogen-activated protein kinase 11##DQ894905|MAPK11|5600|mitogen-activated protein kinase 11##CR456514|MAPK11|5600|mitogen-activated protein kinase 11##U92268|MAPK11|5600|mitogen-activated protein kinase 11##AF001174|MAPK11|5600|mitogen-activated protein kinase 11##Y14440|MAPK11|5600|mitogen-activated protein kinase 11##AF031135|MAPK11|5600|mitogen-activated protein kinase 11##U53442|MAPK11|5600|mitogen-activated protein kinase 11##AK291845|MAPK11|5600|mitogen-activated protein kinase 11##BC027933|MAPK11|5600|mitogen-activated protein kinase 11##NM_002751|MAPK11|5600|mitogen-activated protein kinase 11##AK299745|MAPK11|5600|mitogen-activated protein kinase 11##CU013115|MAPK12|6300|mitogen-activated protein kinase 12##CU013403|MAPK12|6300|mitogen-activated protein kinase 12##DQ892787|MAPK12|6300|mitogen-activated protein kinase 12##DQ896034|MAPK12|6300|mitogen-activated protein kinase 12##X79483|MAPK12|6300|mitogen-activated protein kinase 12##AK308768|MAPK12|6300|mitogen-activated protein kinase 12##CR456515|MAPK12|6300|mitogen-activated protein kinase 12##BC015741|MAPK12|6300|mitogen-activated protein kinase 12##NM_002969|MAPK12|6300|mitogen-activated protein kinase 12##Y10487|MAPK12|6300|mitogen-activated protein kinase 12##AK307421|MAPK12|6300|mitogen-activated protein kinase 12##AK294422|MAPK12|6300|mitogen-activated protein kinase 12##BX640648|MAPK12|6300|mitogen-activated protein kinase 12##AK289770|MAPK12|6300|mitogen-activated protein kinase 12##AK074932|PLXNB2|23654|plexin B2##AK126394|PLXNB2|23654|plexin B2##AK056543|PLXNB2|23654|plexin B2##NM_012401|PLXNB2|23654|plexin B2	0.0	
chr15	43561057	43561176	reg1002463.p1	15.369	+	AF035960 AF035961 BC119009 BC122859 NM_004245 NM_201631	-2062	-	TSC_hg19_v1_chr15_-_43513234 M30646 M30647 NM_000119 NM_001114134	-47838	-	TSC_hg19_v1_chr15_-_43513214 AK297663 M29399	-47910	-	AF363393 NM_052955	33336	-	CU677535 TSC_hg19_v1_chr15_-_43622812 AB011119 AK292587 AK300820 BC015949 NM_014793	61637	-	AK298870 NM_001012969 NM_001159280 BC075857	61781	+	AF035960|TGM5|9333|transglutaminase 5##AF035961|TGM5|9333|transglutaminase 5##BC119009|TGM5|9333|transglutaminase 5##BC122859|TGM5|9333|transglutaminase 5##NM_004245|TGM5|9333|transglutaminase 5##NM_201631|TGM5|9333|transglutaminase 5##M30646|EPB42|2038|erythrocyte membrane protein band 4.2##M30647|EPB42|2038|erythrocyte membrane protein band 4.2##NM_000119|EPB42|2038|erythrocyte membrane protein band 4.2##NM_001114134|EPB42|2038|erythrocyte membrane protein band 4.2##AK297663|EPB42|2038|erythrocyte membrane protein band 4.2##M29399|EPB42|2038|erythrocyte membrane protein band 4.2##AF363393|TGM7|116179|transglutaminase 7##NM_052955|TGM7|116179|transglutaminase 7##AK292587|LCMT2|9836|leucine carboxyl methyltransferase 2##AK300820|LCMT2|9836|leucine carboxyl methyltransferase 2##BC015949|LCMT2|9836|leucine carboxyl methyltransferase 2##NM_014793|LCMT2|9836|leucine carboxyl methyltransferase 2##AK298870|ADAL|161823|adenosine deaminase-like##NM_001012969|ADAL|161823|adenosine deaminase-like##NM_001159280|ADAL|161823|adenosine deaminase-like##BC075857|ADAL|161823|adenosine deaminase-like	0.993675	CTCF.p2:19:0.994
chr9	133933342	133933454	reg1001773.p1	15.369	+	AF041835 NM_006059 TSC_hg19_v1_chr9_+_133884573 AK075536	-48848	+	AK300287 NM_001145106 TSC_hg19_v1_chr9_-_133814549	-118907	-	BC032953 NM_032843 TSC_hg19_v1_chr9_-_133814253	-119154	-	NM_001185095 NM_001185096 NM_031426 TSC_hg19_v1_chr9_+_133971890	38480	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	38560	+	TSC_hg19_v1_chr9_+_134000975 BC105998 AK307573 NM_005085 AL832609 X64228 BC045620 BC012500	67576	+	AF041835|LAMC3|10319|laminin, gamma 3##NM_006059|LAMC3|10319|laminin, gamma 3##AK075536|LAMC3|10319|laminin, gamma 3##AK300287|FIBCD1|84929|fibrinogen C domain containing 1##NM_001145106|FIBCD1|84929|fibrinogen C domain containing 1##BC032953|FIBCD1|84929|fibrinogen C domain containing 1##NM_032843|FIBCD1|84929|fibrinogen C domain containing 1##NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like##NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like##NM_031426|AIF1L|83543|allograft inflammatory factor 1-like##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like##BC105998|NUP214|8021|nucleoporin 214kDa##AK307573|NUP214|8021|nucleoporin 214kDa##NM_005085|NUP214|8021|nucleoporin 214kDa##AL832609|NUP214|8021|nucleoporin 214kDa##X64228|NUP214|8021|nucleoporin 214kDa##BC045620|NUP214|8021|nucleoporin 214kDa##BC012500|NUP214|8021|nucleoporin 214kDa	0.999586	CTCF.p2:10:1.000
chr15	22461082	22461247	reg1000586.p1	15.368	+	BC136597 BC136598 NM_001005241 DQ786223	-78719	+	BC136985 NM_001004719	-92687	+	NM_207355 BC066981	-378026	-	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	12058	-	AK097517 NM_001001413	275081	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	372306	+	BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5	4.764799	CTCF.p2:-11:0.998	CTCF.p2:28:0.262	CTCF.p2:49:0.998	CTCF.p2:-50:0.513	CTCF.p2:-70:0.997	CTCF.p2:88:0.998
chr20	46306725	46306853	reg1002652.p1	15.366	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-176105	+	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	-176167	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-321301	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	107963	-	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	108529	-	AB037836 TSC_hg19_v1_chr20_-_47444291	1137497	-	AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1	1.037132	CTCF.p2:-19:0.994
chr7	134966361	134966493	reg1002398.p1	15.366	+	AB464251 AF513502 NM_182489	-49697	+	TSC_hg19_v1_chr7_-_134896270 AK001606 BX640957 NM_014149	-70136	-	TSC_hg19_v1_chr7_-_134896267 AF161534 AK022935	-70165	-	BC035590 U71267 U71268 AL389980 TSC_hg19_v1_chr7_-_135194851 AK314540 AK074493 AK300365 NM_001008225 NM_001190847 NM_001190848 NM_001190849 NM_001190850 NM_013316	228433	-	TSC_hg19_v1_chr7_+_135242675 NM_015135 BC136624 AK297307 BC146784 D86978	276261	+	TSC_hg19_v1_chr7_+_135347230 NM_001130929 BC063529 BC073942 BC021734 BC107765 BC047474 BC016741 BC040872	380834	+	AB464251|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AF513502|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##NM_182489|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AK001606|WDR91|29062|WD repeat domain 91##BX640957|WDR91|29062|WD repeat domain 91##NM_014149|WDR91|29062|WD repeat domain 91##AF161534|WDR91|29062|WD repeat domain 91##AK022935|WDR91|29062|WD repeat domain 91##BC035590|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71267|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71268|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AL389980|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK314540|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK074493|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK300365|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001008225|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190847|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190848|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190849|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190850|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_013316|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_015135|NUP205|23165|nucleoporin 205kDa##BC136624|NUP205|23165|nucleoporin 205kDa##AK297307|NUP205|23165|nucleoporin 205kDa##BC146784|NUP205|23165|nucleoporin 205kDa##D86978|NUP205|23165|nucleoporin 205kDa##NM_001130929|C7orf73|647087|chromosome 7 open reading frame 73##BC063529|C7orf73|647087|chromosome 7 open reading frame 73##BC073942|C7orf73|647087|chromosome 7 open reading frame 73##BC021734|C7orf73|647087|chromosome 7 open reading frame 73##BC107765|C7orf73|647087|chromosome 7 open reading frame 73##BC047474|C7orf73|647087|chromosome 7 open reading frame 73##BC016741|C7orf73|647087|chromosome 7 open reading frame 73##BC040872|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4	1.877298	CTCF.p2:21:0.904	CTCF.p2:-38:0.973
chr14	23322343	23322493	reg1001756.p1	15.364	+	Z48481 TSC_hg19_v1_chr14_+_23305913 D26512 X90925 AB385035 CU687944 U41078	-16449	+	X83535 TSC_hg19_v1_chr14_+_23305909	-16509	+	TSC_hg19_v1_chr14_+_23305816 BC039581	-16582	+	TSC_hg19_v1_chr14_+_23340981 NM_014045 AY358399 BX161500	18603	+	TSC_hg19_v1_chr14_+_23341364 AL834518 AK291030 BC113714 BC113716	19004	+	AK299238 AK096283 NM_173527 BC035663	30017	+	Z48481|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##D26512|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##X90925|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##U41078|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##X83535|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##NM_014045|LRP10|26020|low density lipoprotein receptor-related protein 10##AY358399|LRP10|26020|low density lipoprotein receptor-related protein 10##BX161500|LRP10|26020|low density lipoprotein receptor-related protein 10##AL834518|LRP10|26020|low density lipoprotein receptor-related protein 10##AK291030|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113714|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113716|LRP10|26020|low density lipoprotein receptor-related protein 10##AK299238|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##AK096283|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##NM_173527|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##BC035663|REM2|161253|RAS (RAD and GEM)-like GTP binding 2	0.777133	CTCF.p2:16:0.777
chr17	70556491	70556631	reg1002144.p1	15.361	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-439321	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-439391	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-439402	+	AK000477 TSC_hg19_v1_chr17_-_70588944	32382	-	AF331643 TSC_hg19_v1_chr17_-_71088816	532255	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	532262	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.997126	CTCF.p2:-20:0.997
chr11	7463953	7464070	reg1002250.p1	15.359	+	AK055003 AB527847 CU692338 TSC_hg19_v1_chr11_+_7273475	-190574	+	TSC_hg19_v1_chr11_+_7273164 BC046367 NM_175733 AK315013	-190818	+	NM_014469 AK292271 AF069682 BC057796 BC029295 AB527964	-353754	+	NM_198474 BX647908 BC092488 TSC_hg19_v1_chr11_+_7506763 AK298137 BC035895 AK297778	42706	+	NM_003621 BC021714 TSC_hg19_v1_chr11_+_7535171	71092	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	71232	+	AK055003|SYT9|143425|synaptotagmin IX##BC046367|SYT9|143425|synaptotagmin IX##NM_175733|SYT9|143425|synaptotagmin IX##AK315013|SYT9|143425|synaptotagmin IX##NM_014469|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AK292271|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AF069682|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC057796|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC029295|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##NM_198474|OLFML1|283298|olfactomedin-like 1##BX647908|OLFML1|283298|olfactomedin-like 1##BC092488|OLFML1|283298|olfactomedin-like 1##AK298137|OLFML1|283298|olfactomedin-like 1##BC035895|OLFML1|283298|olfactomedin-like 1##AK297778|OLFML1|283298|olfactomedin-like 1##NM_003621|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##BC021714|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)	0.938003	CTCF.p2:6:0.938
chr7	139702183	139702309	reg1001360.p1	15.359	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	-173154	+	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	-224207	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	-224341	-	AL137255 TSC_hg19_v1_chr7_-_139762712 BC044660	60365	-	BC081541 NM_022750	61274	-	TSC_hg19_v1_chr7_-_139876751 AB528281 AK131497 NM_030647	174616	-	NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##AL137255|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##BC044660|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##BC081541|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##NM_022750|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##AK131497|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)##NM_030647|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)	0.999122	CTCF.p2:25:0.999
chr5	96204718	96204846	reg1002339.p1	15.358	+	AK310535 BC030775 NM_001198541	-54957	-	TSC_hg19_v1_chr5_-_96143701 NM_001040458 NM_016442	-60992	-	TSC_hg19_v1_chr5_-_96143614 AF106037 AF183569 AF222340 AY358590 AK291636 AY028806 AY028807	-61160	-	NM_001130140 NM_022350 AK074281	6884	+	TSC_hg19_v1_chr5_+_96212203 AK312864 AB109031 AB163917 BC065240	7406	+	TSC_hg19_v1_chr5_+_96271097 AK096804	66311	+	AK310535|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##BC030775|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_001198541|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_001040458|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_016442|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AF106037|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AF183569|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AF222340|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AY358590|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AK291636|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AY028806|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AY028807|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_001130140|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##NM_022350|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AK074281|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AK096804|LNPEP|4012|leucyl/cystinyl aminopeptidase	0.198472	
chr7	127849944	127850058	reg1001533.p2	15.358	+	BC111561 BC111745 AF196976 AJ297858 NM_022143 AK172751 TSC_hg19_v1_chr7_-_127671066 AK314047	-178965	-	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	-557665	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	-557765	+	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	31332	+	CU680694 TSC_hg19_v1_chr7_-_127983862	133853	-	TSC_hg19_v1_chr7_-_127983944 BC013889 AK222716 AK300500 AK295976 AK001239 NM_001166135 NM_018077	133935	-	BC111561|LRRC4|64101|leucine rich repeat containing 4##BC111745|LRRC4|64101|leucine rich repeat containing 4##AF196976|LRRC4|64101|leucine rich repeat containing 4##AJ297858|LRRC4|64101|leucine rich repeat containing 4##NM_022143|LRRC4|64101|leucine rich repeat containing 4##AK172751|LRRC4|64101|leucine rich repeat containing 4##AK314047|LRRC4|64101|leucine rich repeat containing 4##BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin##BC013889|RBM28|55131|RNA binding motif protein 28##AK222716|RBM28|55131|RNA binding motif protein 28##AK300500|RBM28|55131|RNA binding motif protein 28##AK001239|RBM28|55131|RNA binding motif protein 28##NM_001166135|RBM28|55131|RNA binding motif protein 28##NM_018077|RBM28|55131|RNA binding motif protein 28	0.749695	CTCF.p2:-39:0.750
chr8	26548326	26548459	reg1003288.p1	15.358	+	NM_001244604 TSC_hg19_v1_chr8_+_26435921 AK299077	-112465	+	TSC_hg19_v1_chr8_+_26435604 U17279 AB370194 AB590733 BT006944 CU691152	-112712	+	TSC_hg19_v1_chr8_+_26435468 AK223557 BC056408 D78013 BC010880 AK291287	-112865	+	U02569 AY491775 AY491776 AY491777 AY491778 AY491779 AY491780 AY491781 D25235 D32201 D32202 NM_000680 NM_033302 NM_033303 NM_033304	174526	-	AK311558 TSC_hg19_v1_chr8_-_26724735	176342	-	TSC_hg19_v1_chr8_-_26724764 AK289548	176366	-	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2##AK299077|DPYSL2|1808|dihydropyrimidinase-like 2##U17279|DPYSL2|1808|dihydropyrimidinase-like 2##AB370194|DPYSL2|1808|dihydropyrimidinase-like 2##AK223557|DPYSL2|1808|dihydropyrimidinase-like 2##BC056408|DPYSL2|1808|dihydropyrimidinase-like 2##D78013|DPYSL2|1808|dihydropyrimidinase-like 2##AK291287|DPYSL2|1808|dihydropyrimidinase-like 2##U02569|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491775|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491776|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491777|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491778|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491780|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491781|ADRA1A|148|adrenergic, alpha-1A-, receptor##D25235|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32201|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32202|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_000680|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033302|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033303|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033304|ADRA1A|148|adrenergic, alpha-1A-, receptor##AK289548|ADRA1A|148|adrenergic, alpha-1A-, receptor	0.997533	CTCF.p2:-1:0.998
chr1	26431573	26431705	reg1002334.p1	15.354	+	BT007373 BC080529 AF353673 BC015717 AJ276484 AK056942 AK297820 NM_032588 TSC_hg19_v1_chr1_-_26394122	-37586	-	AK094027 AX748418 AF370409 BC006251 NM_001004434 NM_032513	-59116	-	TSC_hg19_v1_chr1_+_26348308 BC065528	-83273	+	NM_001243532	6016	+	AK312872 NM_001243533 NM_152835 TSC_hg19_v1_chr1_+_26438314 AF411102 BC028713 AK129596	6700	+	AK024112 NM_024869 BC025658 AK290715	53901	+	BT007373|TRIM63|84676|tripartite motif containing 63##BC080529|TRIM63|84676|tripartite motif containing 63##AF353673|TRIM63|84676|tripartite motif containing 63##AJ276484|TRIM63|84676|tripartite motif containing 63##AK056942|TRIM63|84676|tripartite motif containing 63##AK297820|TRIM63|84676|tripartite motif containing 63##NM_032588|TRIM63|84676|tripartite motif containing 63##AK094027|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##AF370409|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##BC006251|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##NM_001004434|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##NM_032513|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##BC065528|EXTL1|2134|exostoses (multiple)-like 1##NM_001243532|PDIK1L|149420|PDLIM1 interacting kinase 1 like##AK312872|PDIK1L|149420|PDLIM1 interacting kinase 1 like##NM_001243533|PDIK1L|149420|PDLIM1 interacting kinase 1 like##NM_152835|PDIK1L|149420|PDLIM1 interacting kinase 1 like##AF411102|PDIK1L|149420|PDLIM1 interacting kinase 1 like##BC028713|PDIK1L|149420|PDLIM1 interacting kinase 1 like##AK024112|FAM110D|79927|family with sequence similarity 110, member D##NM_024869|FAM110D|79927|family with sequence similarity 110, member D##BC025658|FAM110D|79927|family with sequence similarity 110, member D##AK290715|FAM110D|79927|family with sequence similarity 110, member D	0.998471	CTCF.p2:-10:0.998
chr1	44471440	44471556	reg1002241.p1	15.352	+	TSC_hg19_v1_chr1_+_44457497 CU689784 AY487420	-13972	+	TSC_hg19_v1_chr1_+_44457322 BC033868 NM_152499 BX641142 BC047313	-14212	+	NM_001005417	-25322	+	NM_006934 NM_201649 S70609 S70612 AK315233	11505	-	TSC_hg19_v1_chr1_-_44497033 AK304057 AK298611	25544	-	TSC_hg19_v1_chr1_-_44497141 AK315933 NM_001024845	25641	-	AY487420|CCDC24|149473|coiled-coil domain containing 24##BC033868|CCDC24|149473|coiled-coil domain containing 24##NM_152499|CCDC24|149473|coiled-coil domain containing 24##BX641142|CCDC24|149473|coiled-coil domain containing 24##BC047313|CCDC24|149473|coiled-coil domain containing 24##NM_001005417|B4GALT2|8704|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2##NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK304057|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK298611|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK315933|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_001024845|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	0.989769	CTCF.p2:4:0.990
chr17	55969966	55970085	reg1001494.p1	15.352	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	-42621	-	AK093888 AX748353 NM_170721	-635652	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-636052	+	AK000746 NM_017949	10724	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	62651	-	TSC_hg19_v1_chr17_+_56065413 AB593183	95449	+	AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.712291	CTCF.p2:-6:0.699
chr3	122747510	122747604	reg1001196.p2	15.352	+	TSC_hg19_v1_chr3_-_122746605 AK309848	-949	-	TSC_hg19_v1_chr3_-_122746576 AK291407 NM_001031702	-983	-	AK309834 TSC_hg19_v1_chr3_-_122746553 AK294528	-1006	-	NM_006810 TSC_hg19_v1_chr3_+_122785922 BC001625 D49490	38361	+	NM_012430 TSC_hg19_v1_chr3_+_122920787 AK315771 AF100749	173233	+	AK303070 NM_001199642	387631	-	AK309848|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK291407|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##NM_001031702|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK309834|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK294528|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##NM_006810|PDIA5|10954|protein disulfide isomerase family A, member 5##BC001625|PDIA5|10954|protein disulfide isomerase family A, member 5##D49490|PDIA5|10954|protein disulfide isomerase family A, member 5##NM_012430|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK315771|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AF100749|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK303070|ADCY5|111|adenylate cyclase 5##NM_001199642|ADCY5|111|adenylate cyclase 5	0.63815	CTCF.p2:13:0.638
chrX	56275028	56275178	reg1002751.p1	15.352	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-16193	+	TSC_hg19_v1_chrX_+_55744181 NM_006064 NM_016656 AL831926 AK289407 BC034726 X90530	-530915	+	BC012934 NM_198451	-625271	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	314948	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	480588	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	746868	-	NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##NM_006064|RRAGB|10325|Ras-related GTP binding B##NM_016656|RRAGB|10325|Ras-related GTP binding B##AL831926|RRAGB|10325|Ras-related GTP binding B##AK289407|RRAGB|10325|Ras-related GTP binding B##BC034726|RRAGB|10325|Ras-related GTP binding B##X90530|RRAGB|10325|Ras-related GTP binding B##BC012934|FOXR2|139628|forkhead box R2##NM_198451|FOXR2|139628|forkhead box R2##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3	0.759554	CTCF.p2:22:0.760
chr19	45562834	45562969	reg1003123.p1	15.350	+	TSC_hg19_v1_chr19_+_45542313 AF042800 NM_007056 AK293333 AY358944 BC013178	-20578	+	TSC_hg19_v1_chr19_+_45504729 M83221 NM_006509 BC028013 AK290594	-58159	+	TSC_hg19_v1_chr19_+_45458649 BC012359 BT007262 CU680306 DQ892236 DQ895436	-104247	+	BC019352 NM_145288	16786	-	TSC_hg19_v1_chr19_+_45582529 NM_001007270 NM_001007269 NM_024707 AK024018 BC007793	19612	+	TSC_hg19_v1_chr19_+_45596205 BC035704	33314	+	AF042800|CLASRP|11129|CLK4-associating serine/arginine rich protein##NM_007056|CLASRP|11129|CLK4-associating serine/arginine rich protein##AK293333|CLASRP|11129|CLK4-associating serine/arginine rich protein##AY358944|CLASRP|11129|CLK4-associating serine/arginine rich protein##BC013178|CLASRP|11129|CLK4-associating serine/arginine rich protein##M83221|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##NM_006509|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##BC028013|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##AK290594|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##BC012359|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##BT007262|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##DQ892236|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##DQ895436|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##BC019352|ZNF296|162979|zinc finger protein 296##NM_145288|ZNF296|162979|zinc finger protein 296##NM_001007270|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_001007269|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_024707|GEMIN7|79760|gem (nuclear organelle) associated protein 7##AK024018|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC007793|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC035704|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37	0.998506	CTCF.p2:9:0.999
chr10	60059400	60059541	reg1002759.p1	15.348	+	BC005962 TSC_hg19_v1_chr10_+_60028929 NM_018464 BC059168 AF220049 BC008474 BC007043 AY960578 AK312017	-30524	+	TSC_hg19_v1_chr10_-_60027655 BC016612 BC065709 NM_152230	-31809	-	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	-1938444	-	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	35366	+	BC029815 TSC_hg19_v1_chr10_+_60145169 AK312558 M62810 NM_003201 BC018628 BC104482 BC126366 EU279428 HQ258758 AB451241 AB451366 AB464302 BT019658 BT019659 CR407653	85735	+	TSC_hg19_v1_chr10_+_60272869 NM_001080512 AY726586	213442	+	BC005962|CISD1|55847|CDGSH iron sulfur domain 1##NM_018464|CISD1|55847|CDGSH iron sulfur domain 1##BC059168|CISD1|55847|CDGSH iron sulfur domain 1##AF220049|CISD1|55847|CDGSH iron sulfur domain 1##BC008474|CISD1|55847|CDGSH iron sulfur domain 1##BC007043|CISD1|55847|CDGSH iron sulfur domain 1##AY960578|CISD1|55847|CDGSH iron sulfur domain 1##AK312017|CISD1|55847|CDGSH iron sulfur domain 1##BC016612|IPMK|253430|inositol polyphosphate multikinase##BC065709|IPMK|253430|inositol polyphosphate multikinase##NM_152230|IPMK|253430|inositol polyphosphate multikinase##AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC029815|TFAM|7019|transcription factor A, mitochondrial##AK312558|TFAM|7019|transcription factor A, mitochondrial##M62810|TFAM|7019|transcription factor A, mitochondrial##NM_003201|TFAM|7019|transcription factor A, mitochondrial##BC018628|TFAM|7019|transcription factor A, mitochondrial##BC104482|TFAM|7019|transcription factor A, mitochondrial##BC126366|TFAM|7019|transcription factor A, mitochondrial##EU279428|TFAM|7019|transcription factor A, mitochondrial##HQ258758|TFAM|7019|transcription factor A, mitochondrial##AB451241|TFAM|7019|transcription factor A, mitochondrial##AB451366|TFAM|7019|transcription factor A, mitochondrial##BT019658|TFAM|7019|transcription factor A, mitochondrial##BT019659|TFAM|7019|transcription factor A, mitochondrial##CR407653|TFAM|7019|transcription factor A, mitochondrial##NM_001080512|BICC1|80114|bicaudal C homolog 1 (Drosophila)##AY726586|BICC1|80114|bicaudal C homolog 1 (Drosophila)	0.995499	CTCF.p2:-13:0.995
chr11	118777849	118777989	reg1002443.p1	15.347	+	NM_032966 X68829	-13819	+	AK291512 NM_001716 BC110352 X68149 AB464488	-23359	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-115985	-	AB094091 NM_182557	3693	-	NM_006760 Y13645 BC113900 AY455312 AB009454	49144	+	AB094092 NM_181721 BC028191 BC125040 BC038969	64559	+	NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_006760|UPK2|7379|uroplakin 2##Y13645|UPK2|7379|uroplakin 2##BC113900|UPK2|7379|uroplakin 2##AY455312|UPK2|7379|uroplakin 2##AB009454|UPK2|7379|uroplakin 2##AB094092|FOXR1|283150|forkhead box R1##NM_181721|FOXR1|283150|forkhead box R1##BC028191|FOXR1|283150|forkhead box R1##BC125040|FOXR1|283150|forkhead box R1##BC038969|FOXR1|283150|forkhead box R1	0.999175	CTCF.p2:-16:0.999
chr1	223936957	223937070	reg1001434.p1	15.347	+	TSC_hg19_v1_chr1_+_223900333 CU676918 AB385111 DQ893312 DQ893620 EU176804	-36679	+	TSC_hg19_v1_chr1_+_223900240 AB209855	-36765	+	M23254 TSC_hg19_v1_chr1_+_223900223 AK303952 AF261089 AK315179 BC021303	-36795	+	AB384887 TSC_hg19_v1_chr1_-_224033497 AK294432	96450	-	TSC_hg19_v1_chr1_-_224033620 BC046150 AJ318888 U58334 BC058918	96610	-	NM_001031685 NM_005426 TSC_hg19_v1_chr1_-_224033682	96681	-	DQ893312|CAPN2|824|calpain 2, (m/II) large subunit##DQ893620|CAPN2|824|calpain 2, (m/II) large subunit##EU176804|CAPN2|824|calpain 2, (m/II) large subunit##AB209855|CAPN2|824|calpain 2, (m/II) large subunit##M23254|CAPN2|824|calpain 2, (m/II) large subunit##AK303952|CAPN2|824|calpain 2, (m/II) large subunit##AF261089|CAPN2|824|calpain 2, (m/II) large subunit##AK315179|CAPN2|824|calpain 2, (m/II) large subunit##BC021303|CAPN2|824|calpain 2, (m/II) large subunit##AK294432|TP53BP2|7159|tumor protein p53 binding protein, 2##BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2##AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2##U58334|TP53BP2|7159|tumor protein p53 binding protein, 2##BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2	0.999789	CTCF.p2:10:1.000
chr3	42922584	42922716	reg1001854.p1	15.346	+	NM_004391	-5018	-	AF090318 TSC_hg19_v1_chr3_-_42917348 BC067434 BC067441 BC067442 BC067443 BC067444 AK315330 AK310784	-5320	-	BC011588 BC018716 BC020558 NM_001296 AK313561 BC008816 BC011631	-71681	+	AK127779 NM_207404	24751	+	TSC_hg19_v1_chr3_+_42947649 NM_001134656 AK128676	25007	+	NM_001205272 BC062786 AK130974 TSC_hg19_v1_chr3_+_42977866 AK296046	55208	+	NM_004391|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##AF090318|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067434|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067441|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067442|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067443|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067444|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##AK310784|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC011588|CCBP2|1238|chemokine binding protein 2##BC018716|CCBP2|1238|chemokine binding protein 2##BC020558|CCBP2|1238|chemokine binding protein 2##NM_001296|CCBP2|1238|chemokine binding protein 2##AK313561|CCBP2|1238|chemokine binding protein 2##BC008816|CCBP2|1238|chemokine binding protein 2##BC011631|CCBP2|1238|chemokine binding protein 2##AK127779|ZNF662|389114|zinc finger protein 662##NM_207404|ZNF662|389114|zinc finger protein 662##NM_001134656|ZNF662|389114|zinc finger protein 662##AK128676|ZNF662|389114|zinc finger protein 662##NM_001205272|KRBOX1|100506243|KRAB box domain containing 1##BC062786|KRBOX1|100506243|KRAB box domain containing 1##AK130974|KRBOX1|100506243|KRAB box domain containing 1	0.934462	CTCF.p2:0:0.934
chr6	33995501	33995636	reg1002646.p1	15.346	+	BC112314 BC143981 Y00695 BC069675 NM_001040109 NM_001184698 NM_002418	-223794	-	BC039864 NM_181336 TSC_hg19_v1_chr6_-_33756906	-238658	-	TSC_hg19_v1_chr6_-_33756897 BC051803	-238677	-	AB385221 EU432124 HQ258665 HQ258669 U92457 BC130526 BC130528 BC144057 NM_000841 X80818 AK308669	105834	-	NM_002131 NM_145899 NM_145903 TSC_hg19_v1_chr6_+_34204617	209043	+	TSC_hg19_v1_chr6_+_34204649 AK096863 M23616 M23617 NM_145901 NM_145902 AK301434	209082	+	BC112314|MLN|4295|motilin##BC143981|MLN|4295|motilin##Y00695|MLN|4295|motilin##BC069675|MLN|4295|motilin##NM_001040109|MLN|4295|motilin##NM_001184698|MLN|4295|motilin##NM_002418|MLN|4295|motilin##BC039864|LEMD2|221496|LEM domain containing 2##NM_181336|LEMD2|221496|LEM domain containing 2##BC051803|LEMD2|221496|LEM domain containing 2##EU432124|GRM4|2914|glutamate receptor, metabotropic 4##HQ258665|GRM4|2914|glutamate receptor, metabotropic 4##HQ258669|GRM4|2914|glutamate receptor, metabotropic 4##U92457|GRM4|2914|glutamate receptor, metabotropic 4##BC130526|GRM4|2914|glutamate receptor, metabotropic 4##BC130528|GRM4|2914|glutamate receptor, metabotropic 4##BC144057|GRM4|2914|glutamate receptor, metabotropic 4##NM_000841|GRM4|2914|glutamate receptor, metabotropic 4##X80818|GRM4|2914|glutamate receptor, metabotropic 4##NM_002131|HMGA1|3159|high mobility group AT-hook 1##NM_145899|HMGA1|3159|high mobility group AT-hook 1##NM_145903|HMGA1|3159|high mobility group AT-hook 1##AK096863|HMGA1|3159|high mobility group AT-hook 1##M23616|HMGA1|3159|high mobility group AT-hook 1##M23617|HMGA1|3159|high mobility group AT-hook 1##NM_145901|HMGA1|3159|high mobility group AT-hook 1##NM_145902|HMGA1|3159|high mobility group AT-hook 1##AK301434|HMGA1|3159|high mobility group AT-hook 1	1.031641	CTCF.p2:15:0.994
chr9	74895976	74896109	reg1002590.p1	15.344	+	TSC_hg19_v1_chr9_+_74764417 CU690994 AK315988	-131590	+	TSC_hg19_v1_chr9_+_74764402 AB033084	-131643	+	AF095286 TSC_hg19_v1_chr9_+_74764386 AF019638	-131656	+	TSC_hg19_v1_chr9_+_74920350 AK095210	24309	+	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	83683	-	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	84058	-	AK315988|GDA|9615|guanine deaminase##AB033084|GDA|9615|guanine deaminase##AF095286|GDA|9615|guanine deaminase##AF019638|GDA|9615|guanine deaminase##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5	0.759608	CTCF.p2:-20:0.749
chr3	137787562	137787689	reg1001826.p1	15.342	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	-58622	+	AK098474 NM_001002026 AF349452	-69946	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	-304478	+	AK057406 NM_001170538	44696	-	BC033308 NM_173543 TSC_hg19_v1_chr3_-_137834481	46850	-	BC119639 BC119640 AF141315 AK225668 NM_016161	63550	-	AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK057406|DZIP1L|199221|DAZ interacting protein 1-like##NM_001170538|DZIP1L|199221|DAZ interacting protein 1-like##BC033308|DZIP1L|199221|DAZ interacting protein 1-like##NM_173543|DZIP1L|199221|DAZ interacting protein 1-like##BC119639|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##BC119640|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##AF141315|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##AK225668|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##NM_016161|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase	0.988883	CTCF.p2:-19:0.989
chr7	913074	913195	reg1000929.p1	15.342	+	BC142707 NM_001130965 AB463335 CU680640	-40986	+	NM_001171944 NM_001171945 NM_025154 TSC_hg19_v1_chr7_+_856279 AK022816 AK302896 AK309120 AK022469 BX538211 BC151827 AB018353 BC152418	-56852	+	BC013613 NM_001171946	-57941	+	TSC_hg19_v1_chr7_+_916188 NM_015949	3069	+	TSC_hg19_v1_chr7_+_916249 BC003550 AK023560 AF132954	3136	+	AK300644 AK300859 TSC_hg19_v1_chr7_-_960513	47380	-	BC142707|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001130965|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171944|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171945|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_025154|SUN1|23353|Sad1 and UNC84 domain containing 1##AK022816|SUN1|23353|Sad1 and UNC84 domain containing 1##AK302896|SUN1|23353|Sad1 and UNC84 domain containing 1##AK309120|SUN1|23353|Sad1 and UNC84 domain containing 1##AK022469|SUN1|23353|Sad1 and UNC84 domain containing 1##BX538211|SUN1|23353|Sad1 and UNC84 domain containing 1##BC151827|SUN1|23353|Sad1 and UNC84 domain containing 1##AB018353|SUN1|23353|Sad1 and UNC84 domain containing 1##BC152418|SUN1|23353|Sad1 and UNC84 domain containing 1##BC013613|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171946|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_015949|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##BC003550|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK023560|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AF132954|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK300644|ADAP1|11033|ArfGAP with dual PH domains 1##AK300859|ADAP1|11033|ArfGAP with dual PH domains 1	0.897895	CTCF.p2:4:0.898
chr1	62641380	62641503	reg1003108.p1	15.339	+	TSC_hg19_v1_chr1_+_62208151 AJ001306 AJ224747 AJ224748 NM_176877 AK307713 AK308428 BC142661 BC142723	-433291	+	AF353990 NM_032027	-450347	-	TSC_hg19_v1_chr1_-_62190806 BC048995 BC029486	-450622	-	NM_001164835 NM_019079 BC012555 BC060808 AB211065 AL834314 AK001973 BC111559	19075	+	AK091941 AX747268 TSC_hg19_v1_chr1_-_62785028	143558	-	TSC_hg19_v1_chr1_-_62785084 AB284127 BC060866 NM_181712	143638	-	AJ001306|INADL|10207|InaD-like (Drosophila)##AJ224747|INADL|10207|InaD-like (Drosophila)##AJ224748|INADL|10207|InaD-like (Drosophila)##NM_176877|INADL|10207|InaD-like (Drosophila)##AK307713|INADL|10207|InaD-like (Drosophila)##AK308428|INADL|10207|InaD-like (Drosophila)##BC142661|INADL|10207|InaD-like (Drosophila)##BC142723|INADL|10207|InaD-like (Drosophila)##AF353990|TM2D1|83941|TM2 domain containing 1##NM_032027|TM2D1|83941|TM2 domain containing 1##BC048995|TM2D1|83941|TM2 domain containing 1##BC029486|TM2D1|83941|TM2 domain containing 1##NM_001164835|L1TD1|54596|LINE-1 type transposase domain containing 1##NM_019079|L1TD1|54596|LINE-1 type transposase domain containing 1##BC012555|L1TD1|54596|LINE-1 type transposase domain containing 1##BC060808|L1TD1|54596|LINE-1 type transposase domain containing 1##AB211065|L1TD1|54596|LINE-1 type transposase domain containing 1##AL834314|L1TD1|54596|LINE-1 type transposase domain containing 1##AK001973|L1TD1|54596|LINE-1 type transposase domain containing 1##BC111559|L1TD1|54596|LINE-1 type transposase domain containing 1##AK091941|KANK4|163782|KN motif and ankyrin repeat domains 4##AB284127|KANK4|163782|KN motif and ankyrin repeat domains 4##BC060866|KANK4|163782|KN motif and ankyrin repeat domains 4##NM_181712|KANK4|163782|KN motif and ankyrin repeat domains 4	1.062723	CTCF.p2:-6:0.993
chr12	110869278	110869390	reg1002395.p1	15.338	+	TSC_hg19_v1_chr12_-_110841526 BC141848 AK021809 NM_001137664 NM_016238	-27823	-	TSC_hg19_v1_chr12_-_110841470 BC098264 BC098295 BC098362 BC099732 BC111798 AF191340 BC148236 BC040130	-27895	-	TSC_hg19_v1_chr12_+_110719528 M23114 BC035588 M23115 CU690124	-149966	+	TSC_hg19_v1_chr12_-_110888079 AF006086	18751	-	BC078162 TSC_hg19_v1_chr12_-_110888104	18767	-	TSC_hg19_v1_chr12_-_110888123 BC067747 AL357196	18784	-	BC141848|ANAPC7|51434|anaphase promoting complex subunit 7##AK021809|ANAPC7|51434|anaphase promoting complex subunit 7##NM_001137664|ANAPC7|51434|anaphase promoting complex subunit 7##NM_016238|ANAPC7|51434|anaphase promoting complex subunit 7##BC098264|ANAPC7|51434|anaphase promoting complex subunit 7##BC098295|ANAPC7|51434|anaphase promoting complex subunit 7##BC098362|ANAPC7|51434|anaphase promoting complex subunit 7##BC099732|ANAPC7|51434|anaphase promoting complex subunit 7##BC111798|ANAPC7|51434|anaphase promoting complex subunit 7##AF191340|ANAPC7|51434|anaphase promoting complex subunit 7##BC148236|ANAPC7|51434|anaphase promoting complex subunit 7##BC040130|ANAPC7|51434|anaphase promoting complex subunit 7##M23114|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC035588|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23115|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##AF006086|ARPC3|10094|actin related protein 2/3 complex, subunit 3, 21kDa##BC078162|ARPC3|10094|actin related protein 2/3 complex, subunit 3, 21kDa##BC067747|ARPC3|10094|actin related protein 2/3 complex, subunit 3, 21kDa	0.998588	CTCF.p2:11:0.999
chr19	39612831	39612948	reg1001725.p1	15.338	+	AK131245 NM_001004318	-37945	+	TSC_hg19_v1_chr19_-_39523185 BC030060 AF436061 BC014527 NM_178820	-89656	-	CU677033 TSC_hg19_v1_chr19_-_39522905	-89990	-	TSC_hg19_v1_chr19_+_39616436 AK294586 NM_001014831 NM_001014832 NM_001014834 NM_001014835 NM_005884 AK293517 AK291839 AX775863 AX775865 AK300632 BC002921 AX775871 BC034511 AK304651 BC011368 AL834236 AX775867 AX775869 BC025282 AF005046 AB032968	3556	+	BC092493 AK123941 BC067874 NM_001001414 TSC_hg19_v1_chr19_+_39687603	74713	+	BC039541 AK130951 TSC_hg19_v1_chr19_-_39694904 BC121075 BC121076 NM_001080468	82009	-	AK131245|PAPL|390928|iron/zinc purple acid phosphatase-like protein##NM_001004318|PAPL|390928|iron/zinc purple acid phosphatase-like protein##BC030060|FBXO27|126433|F-box protein 27##AF436061|FBXO27|126433|F-box protein 27##BC014527|FBXO27|126433|F-box protein 27##NM_178820|FBXO27|126433|F-box protein 27##AK294586|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014831|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014832|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014834|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014835|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_005884|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK293517|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK291839|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775863|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775865|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK300632|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC002921|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775871|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC034511|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK304651|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC011368|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AL834236|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775867|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775869|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC025282|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AF005046|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AB032968|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC092493|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##AK123941|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##BC067874|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##NM_001001414|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##BC039541|SYCN|342898|syncollin##AK130951|SYCN|342898|syncollin##BC121075|SYCN|342898|syncollin##BC121076|SYCN|342898|syncollin##NM_001080468|SYCN|342898|syncollin	0.733281	CTCF.p2:-9:0.733
chr5	150431341	150431464	reg1001678.p1	15.337	+	TSC_hg19_v1_chr5_+_150400151 AK310242 BC066949 D00632 BC025956 BC035841 BC050378 BC013218 BC013601 AF217787 CU690654	-31229	+	TSC_hg19_v1_chr5_+_150399998 NM_002084	-31399	+	TSC_hg19_v1_chr5_-_150326105 BC117490 BC126474 AK091436 AX746982 AK096536 BC022559	-105279	-	BC012133 BX640647 TSC_hg19_v1_chr5_-_150460585 AK074400 BC007666 AK299975 AK303573	29172	-	TSC_hg19_v1_chr5_-_150460599 AB252972 AB252973 AB252975 NM_001252385 NM_001252386 NM_001252393 NM_006058 AY012155	29221	-	BC014008 AB252970 AB252971 AB252974 AB252982 AJ011895 AJ011896 AK298685 NM_001252391 NM_001252392	35319	-	AK310242|GPX3|2878|glutathione peroxidase 3 (plasma)##BC066949|GPX3|2878|glutathione peroxidase 3 (plasma)##D00632|GPX3|2878|glutathione peroxidase 3 (plasma)##BC025956|GPX3|2878|glutathione peroxidase 3 (plasma)##BC035841|GPX3|2878|glutathione peroxidase 3 (plasma)##BC050378|GPX3|2878|glutathione peroxidase 3 (plasma)##BC013218|GPX3|2878|glutathione peroxidase 3 (plasma)##BC013601|GPX3|2878|glutathione peroxidase 3 (plasma)##AF217787|GPX3|2878|glutathione peroxidase 3 (plasma)##NM_002084|GPX3|2878|glutathione peroxidase 3 (plasma)##BC117490|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##BC126474|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##AK091436|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##AK096536|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##BC022559|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##BC012133|TNIP1|10318|TNFAIP3 interacting protein 1##BX640647|TNIP1|10318|TNFAIP3 interacting protein 1##AK074400|TNIP1|10318|TNFAIP3 interacting protein 1##BC007666|TNIP1|10318|TNFAIP3 interacting protein 1##AK299975|TNIP1|10318|TNFAIP3 interacting protein 1##AK303573|TNIP1|10318|TNFAIP3 interacting protein 1##AB252972|TNIP1|10318|TNFAIP3 interacting protein 1##AB252973|TNIP1|10318|TNFAIP3 interacting protein 1##AB252975|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252385|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252386|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252393|TNIP1|10318|TNFAIP3 interacting protein 1##NM_006058|TNIP1|10318|TNFAIP3 interacting protein 1##AY012155|TNIP1|10318|TNFAIP3 interacting protein 1##BC014008|TNIP1|10318|TNFAIP3 interacting protein 1##AB252970|TNIP1|10318|TNFAIP3 interacting protein 1##AB252971|TNIP1|10318|TNFAIP3 interacting protein 1##AB252982|TNIP1|10318|TNFAIP3 interacting protein 1##AJ011895|TNIP1|10318|TNFAIP3 interacting protein 1##AJ011896|TNIP1|10318|TNFAIP3 interacting protein 1##AK298685|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252391|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252392|TNIP1|10318|TNFAIP3 interacting protein 1	0.993115	CTCF.p2:-5:0.993
chr9	138859510	138859648	reg1002485.p1	15.337	+	TSC_hg19_v1_chr9_-_138853220 AF176796 BC004967 NM_016172	-6376	-	CU678830 DQ892567 DQ895782 TSC_hg19_v1_chr9_-_138853062 BC011822	-6540	-	TSC_hg19_v1_chr9_-_138799245 NM_015447	-60418	-	TSC_hg19_v1_chr9_-_138987136 BC015649 AK129748 NM_144653	127556	-	BC092490 BC111053 TSC_hg19_v1_chr9_-_139010485	150856	-	BC014304 BC013282 TSC_hg19_v1_chr9_-_139010700 AK023162 AK091349 AX746927 BC021231	151091	-	AF176796|UBAC1|10422|UBA domain containing 1##BC004967|UBAC1|10422|UBA domain containing 1##NM_016172|UBAC1|10422|UBA domain containing 1##DQ892567|UBAC1|10422|UBA domain containing 1##DQ895782|UBAC1|10422|UBA domain containing 1##BC011822|UBAC1|10422|UBA domain containing 1##NM_015447|CAMSAP1|157922|calmodulin regulated spectrin-associated protein 1##BC015649|NACC2|138151|NACC family member 2, BEN and BTB (POZ) domain containing##NM_144653|NACC2|138151|NACC family member 2, BEN and BTB (POZ) domain containing##BC092490|C9orf69|90120|chromosome 9 open reading frame 69##BC111053|C9orf69|90120|chromosome 9 open reading frame 69##BC014304|C9orf69|90120|chromosome 9 open reading frame 69##BC013282|C9orf69|90120|chromosome 9 open reading frame 69##AK023162|C9orf69|90120|chromosome 9 open reading frame 69##AK091349|C9orf69|90120|chromosome 9 open reading frame 69##BC021231|C9orf69|90120|chromosome 9 open reading frame 69	1.374584	CTCF.p2:-12:0.954	CTCF.p2:-81:0.421
chr2	96804557	96804672	reg1001203.p1	15.335	+	BC107126 AJ537600 BC107127 NM_001002036	-441	-	NM_000682 AB527942 BC133021 BC136537	-22679	-	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	-103920	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	6340	-	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	6545	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	69441	-	BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.991587	CTCF.p2:-9:0.992
chr11	126064121	126064265	reg1001924.p2	15.334	+	BC098583 NM_001243597 NM_016952	-131007	-	NM_013264 BC031098 BC050360 AK312772 TSC_hg19_v1_chr11_+_125774406 AK295121 BC035388	-289851	+	TSC_hg19_v1_chr11_-_125773094 AK055702 BC004822 AK314251 NM_031307	-291082	-	CU680792 TSC_hg19_v1_chr11_-_126081542 AK027400 AK308059 AK225320 BC014131 NM_001144827 NM_032795	17366	-	NM_024556 TSC_hg19_v1_chr11_+_126081676 AK315615 AK024756 AK225081 BC001647	17469	+	CR457025 DQ891476 DQ894664 AB385045 X06272 TSC_hg19_v1_chr11_-_126138730 BC009110	74522	-	BC098583|CDON|50937|Cdon homolog (mouse)##NM_001243597|CDON|50937|Cdon homolog (mouse)##NM_016952|CDON|50937|Cdon homolog (mouse)##NM_013264|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##BC031098|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##BC050360|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##AK312772|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##AK295121|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##BC035388|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##AK055702|PUS3|83480|pseudouridylate synthase 3##BC004822|PUS3|83480|pseudouridylate synthase 3##AK314251|PUS3|83480|pseudouridylate synthase 3##NM_031307|PUS3|83480|pseudouridylate synthase 3##AK027400|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##AK308059|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##AK225320|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##BC014131|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##NM_001144827|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##NM_032795|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##NM_024556|FAM118B|79607|family with sequence similarity 118, member B##AK315615|FAM118B|79607|family with sequence similarity 118, member B##AK024756|FAM118B|79607|family with sequence similarity 118, member B##AK225081|FAM118B|79607|family with sequence similarity 118, member B##BC001647|FAM118B|79607|family with sequence similarity 118, member B##CR457025|SRPR|6734|signal recognition particle receptor (docking protein)##DQ891476|SRPR|6734|signal recognition particle receptor (docking protein)##DQ894664|SRPR|6734|signal recognition particle receptor (docking protein)##X06272|SRPR|6734|signal recognition particle receptor (docking protein)##BC009110|SRPR|6734|signal recognition particle receptor (docking protein)	0.996411	CTCF.p2:16:0.996
chr15	56092074	56092213	reg1002972.p1	15.331	+	AY630258 NM_173814 TSC_hg19_v1_chr15_-_56035276	-56917	-	AF457207 NM_015617	-211094	-	EF625686 TSC_hg19_v1_chr15_-_55880544	-211611	-	BC136605 BC144284 BC144285 AL832063 NM_198400	117173	-	TSC_hg19_v1_chr15_-_56285776 BC035707 AK304394 AY550969 BC152452 BC152562 D42055 NM_006154	193652	-	TSC_hg19_v1_chr15_-_56388663 AL832584	296554	-	AY630258|PRTG|283659|protogenin##NM_173814|PRTG|283659|protogenin##AF457207|PYGO1|26108|pygopus homolog 1 (Drosophila)##NM_015617|PYGO1|26108|pygopus homolog 1 (Drosophila)##EF625686|PYGO1|26108|pygopus homolog 1 (Drosophila)##BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832584|RFX7|64864|regulatory factor X, 7	0.99623	CTCF.p2:-8:0.996
chr1	11954119	11954229	reg1001722.p1	15.329	+	CR541976 CR542003 BC025785 M25296 NM_002521	-35234	-	AB528342 DQ893115 DQ896389 EU176780 M30262 TSC_hg19_v1_chr1_-_11907841 BC005893 NM_006172	-46383	-	TSC_hg19_v1_chr1_+_11866302 BC050457 HQ258635 X96391 X99473 X99474 X99475	-87849	+	TSC_hg19_v1_chr1_-_11986485 BC035033 AB095933 NM_138346	32299	-	TSC_hg19_v1_chr1_+_11994717 NM_000302	40548	+	TSC_hg19_v1_chr1_+_11994779 AK295254 AK294688 AK316285 AK312243 AK299150 M98252 BC016657 AB385110	40631	+	CR541976|NPPB|4879|natriuretic peptide B##CR542003|NPPB|4879|natriuretic peptide B##BC025785|NPPB|4879|natriuretic peptide B##M25296|NPPB|4879|natriuretic peptide B##NM_002521|NPPB|4879|natriuretic peptide B##DQ893115|NPPA|4878|natriuretic peptide A##DQ896389|NPPA|4878|natriuretic peptide A##EU176780|NPPA|4878|natriuretic peptide A##M30262|NPPA|4878|natriuretic peptide A##BC005893|NPPA|4878|natriuretic peptide A##NM_006172|NPPA|4878|natriuretic peptide A##BC050457|CLCN6|1185|chloride channel 6##HQ258635|CLCN6|1185|chloride channel 6##X96391|CLCN6|1185|chloride channel 6##X99473|CLCN6|1185|chloride channel 6##X99474|CLCN6|1185|chloride channel 6##X99475|CLCN6|1185|chloride channel 6##BC035033|KIAA2013|90231|KIAA2013##AB095933|KIAA2013|90231|KIAA2013##NM_138346|KIAA2013|90231|KIAA2013##NM_000302|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK295254|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK294688|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK316285|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK312243|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK299150|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##M98252|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##BC016657|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	1.029476	CTCF.p2:7:0.999
chr15	64044409	64044547	reg1002804.p1	15.329	+	BC017581 BC036918 AK093077 TSC_hg19_v1_chr15_-_63893135	-151436	-	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	-154899	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	-247601	+	TSC_hg19_v1_chr15_-_64126081 U50078	81606	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	81642	-	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	81662	-	BC017581|LOC100130855|100130855|uncharacterized LOC100130855##BC036918|LOC100130855|100130855|uncharacterized LOC100130855##AK093077|LOC100130855|100130855|uncharacterized LOC100130855##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	0.0	
chr1	88419542	88419684	reg1003196.p1	15.328	+	TSC_hg19_v1_chr1_+_87797426 BC065818	-622198	+	TSC_hg19_v1_chr1_+_87797312 AY321514	-622288	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	-624932	+	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	730482	+	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	937598	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	937660	-	BC065818|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB	0.777938	CTCF.p2:7:0.778
chr10	94276898	94277017	reg1001814.p2	15.327	+	AK302578 AK093287 AK316407 AX748033 NM_001165946	-19464	-	TSC_hg19_v1_chr10_+_94050959 AK000452 AK309175 NM_017824 AK294799 BC015480 AB191202 AB529108	-225903	+	TSC_hg19_v1_chr10_-_94050827 BC036444 AK302576 NM_014912	-226121	-	TSC_hg19_v1_chr10_-_94333800 AB527891 AK312810 BC096336 BC096337 BC096338 BC096339 BC036188	56817	-	TSC_hg19_v1_chr10_-_94333845 M21188	56880	-	TSC_hg19_v1_chr10_-_94333847 NM_004969	56910	-	AK302578|IDE|3416|insulin-degrading enzyme##AK093287|IDE|3416|insulin-degrading enzyme##AK316407|IDE|3416|insulin-degrading enzyme##NM_001165946|IDE|3416|insulin-degrading enzyme##AK000452|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK309175|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##NM_017824|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK294799|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##BC015480|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AB191202|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##BC036444|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK302576|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_014912|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK312810|IDE|3416|insulin-degrading enzyme##BC096336|IDE|3416|insulin-degrading enzyme##BC096337|IDE|3416|insulin-degrading enzyme##BC096338|IDE|3416|insulin-degrading enzyme##BC096339|IDE|3416|insulin-degrading enzyme##BC036188|IDE|3416|insulin-degrading enzyme##M21188|IDE|3416|insulin-degrading enzyme##NM_004969|IDE|3416|insulin-degrading enzyme	0.998355	CTCF.p2:-4:0.998
chr4	164477480	164477604	reg1001163.p1	15.326	+	TSC_hg19_v1_chr4_+_164415868 BC011842	-61669	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-61700	+	TSC_hg19_v1_chr4_+_164415817 BC017418 AK298235	-61726	+	AB463878 AK000675 AK301408 NM_017923	57173	-	NM_012403	641320	-	AK289711 NM_001166373	826864	-	BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##BC017418|C4orf43|55319|chromosome 4 open reading frame 43##AK298235|C4orf43|55319|chromosome 4 open reading frame 43##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	0.0	
chr11	46330212	46330344	reg1002704.p1	15.325	+	TSC_hg19_v1_chr11_+_46299596 AB463458 CU680776 DQ895809 EU176365	-30655	+	BC014097 TSC_hg19_v1_chr11_+_46299557 BC015781 AB063321	-30718	+	TSC_hg19_v1_chr11_+_46299212 AK314072 NM_052854	-31073	+	AK124594 NM_201532	24176	+	NM_201533 TSC_hg19_v1_chr11_+_46366981 AK303322	36620	+	TSC_hg19_v1_chr11_+_46366983 AK123378 BX648433	36706	+	DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AK124594|DGKZ|8525|diacylglycerol kinase, zeta##NM_201532|DGKZ|8525|diacylglycerol kinase, zeta##NM_201533|DGKZ|8525|diacylglycerol kinase, zeta##AK303322|DGKZ|8525|diacylglycerol kinase, zeta##AK123378|DGKZ|8525|diacylglycerol kinase, zeta##BX648433|DGKZ|8525|diacylglycerol kinase, zeta	0.999489	CTCF.p2:1:0.999
chr1	249101442	249101560	reg1001775.p1	15.324	+	NM_001004734 BC137188 BC137189	-255885	-	NM_001001824	-287317	-	NM_001001827 AB528813	-298942	-	AY358453 TSC_hg19_v1_chr1_-_249120082 AK056382 NM_030645	18607	-	TSC_hg19_v1_chr1_+_249132449 BC029310	30956	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	31044	+	NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##NM_001001824|OR2T27|403239|olfactory receptor, family 2, subfamily T, member 27##NM_001001827|OR2T35|403244|olfactory receptor, family 2, subfamily T, member 35##AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like##AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like##BC029310|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672	0.990606	CTCF.p2:18:0.991
chr10	108555512	108555640	reg1002374.p1	15.322	+	TSC_hg19_v1_chr10_-_108459000 AK123752	-96517	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-2154531	+	AB028982 NM_014978	-2154718	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	368800	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	3127633	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	3127701	-	AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.792862	CTCF.p2:-13:0.793
chr1	182365961	182366106	reg1002365.p1	15.322	+	TSC_hg19_v1_chr1_-_182361366 AK122784 NM_001033044 NM_002065	-4693	-	TSC_hg19_v1_chr1_-_182360928 AY947343 BC018992 BC011700 X59834 BC010037 BC011852 Y00387 BC051726 BX537384	-5098	-	TSC_hg19_v1_chr1_-_182360477 NM_001033056	-5495	-	AJ515384 NM_172000	3717	-	NM_001137669 AK302768 BC142944 AL136902	53240	+	AK315231 BC090934 TSC_hg19_v1_chr1_-_182558392 CR627369 NM_021133	192350	-	AK122784|GLUL|2752|glutamate-ammonia ligase##NM_001033044|GLUL|2752|glutamate-ammonia ligase##NM_002065|GLUL|2752|glutamate-ammonia ligase##AY947343|GLUL|2752|glutamate-ammonia ligase##BC018992|GLUL|2752|glutamate-ammonia ligase##BC011700|GLUL|2752|glutamate-ammonia ligase##X59834|GLUL|2752|glutamate-ammonia ligase##BC010037|GLUL|2752|glutamate-ammonia ligase##BC011852|GLUL|2752|glutamate-ammonia ligase##Y00387|GLUL|2752|glutamate-ammonia ligase##BC051726|GLUL|2752|glutamate-ammonia ligase##BX537384|GLUL|2752|glutamate-ammonia ligase##NM_001033056|GLUL|2752|glutamate-ammonia ligase##AJ515384|TEDDM1|127670|transmembrane epididymal protein 1##NM_172000|TEDDM1|127670|transmembrane epididymal protein 1##NM_001137669|RGSL1|353299|regulator of G-protein signaling like 1##AK302768|RGSL1|353299|regulator of G-protein signaling like 1##BC142944|RGSL1|353299|regulator of G-protein signaling like 1##AL136902|RGSL1|353299|regulator of G-protein signaling like 1##AK315231|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##BC090934|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##CR627369|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##NM_021133|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)	0.996018	CTCF.p2:11:0.996
chr14	105669431	105669540	reg1001545.p2	15.322	+	TSC_hg19_v1_chr14_-_105647650 AB087802 HQ257983 BC041584 AK128196 AK310449 NM_177533	-21891	-	TSC_hg19_v1_chr14_-_105635114 AF029778 AF029779 NM_002226 NM_145159	-34348	-	Y14330 AF003521 AF020201 TSC_hg19_v1_chr14_-_105634835 BC032053	-34694	-	AJ297407 NM_145685	44736	-	TSC_hg19_v1_chr14_+_105714874 NM_033271	45380	+	TSC_hg19_v1_chr14_+_105714895 BC042525	45464	+	AB087802|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##HQ257983|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##BC041584|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AK128196|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##NM_177533|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AF029778|JAG2|3714|jagged 2##AF029779|JAG2|3714|jagged 2##NM_002226|JAG2|3714|jagged 2##NM_145159|JAG2|3714|jagged 2##Y14330|JAG2|3714|jagged 2##AF003521|JAG2|3714|jagged 2##AF020201|JAG2|3714|jagged 2##BC032053|JAG2|3714|jagged 2##AJ297407|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_145685|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_033271|BTBD6|90135|BTB (POZ) domain containing 6##BC042525|BTBD6|90135|BTB (POZ) domain containing 6	1.051189	CTCF.p2:9:0.993
chr9	129544174	129544303	reg1002518.p1	15.322	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	-167477	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-455071	+	AK309713 NM_001134778	-1033761	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	23072	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	78706	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	132866	+	NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	0.999758	CTCF.p2:0:1.000
chr10	13820109	13820242	reg1002868.p1	15.321	+	TSC_hg19_v1_chr10_-_13749648 AK057828	-70486	-	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-191188	+	NM_003675 TSC_hg19_v1_chr10_+_13628948	-191232	+	TSC_hg19_v1_chr10_-_14050453 AK001072	230317	-	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	552675	-	TSC_hg19_v1_chr10_-_14646259 BC064407	826142	-	AK057828|FRMD4A|55691|FERM domain containing 4A##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK001072|FRMD4A|55691|FERM domain containing 4A##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B	0.999303	CTCF.p2:0:0.999
chr1	201762290	201762392	reg1001239.p2	15.321	+	AB033039 TSC_hg19_v1_chr1_+_201751812	-10556	+	TSC_hg19_v1_chr1_+_201709059 BC069250	-53276	+	TSC_hg19_v1_chr1_+_201709027 NM_001167738 BX648460	-53357	+	TSC_hg19_v1_chr1_+_201798284 NM_018085	35949	+	TSC_hg19_v1_chr1_+_201798330 AF410465	35996	+	AK311191 TSC_hg19_v1_chr1_+_201857806 NM_198149 AK316312 BC111855	95461	+	AB033039|NAV1|89796|neuron navigator 1##BC069250|NAV1|89796|neuron navigator 1##NM_001167738|NAV1|89796|neuron navigator 1##BX648460|NAV1|89796|neuron navigator 1##NM_018085|IPO9|55705|importin 9##AF410465|IPO9|55705|importin 9##AK311191|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##NM_198149|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##AK316312|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC111855|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	0.668336	CTCF.p2:2:0.668
chr6	100194297	100194419	reg1002474.p1	15.321	+	AY004253 NM_021620	-139709	+	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	-177755	-	CU679631 CU691126 AB528579 AB125137 BC050726 TSC_hg19_v1_chr6_-_100016505 AK223247 M74091 AK291914 AK222768 BC026272 BC030159 BC056153	-177901	-	AK123634 NM_001040179 NM_032503 AF347063	247752	-	NM_005068 U70212	717192	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	1134742	-	AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##AB125137|CCNC|892|cyclin C##BC050726|CCNC|892|cyclin C##AK223247|CCNC|892|cyclin C##M74091|CCNC|892|cyclin C##AK291914|CCNC|892|cyclin C##AK222768|CCNC|892|cyclin C##BC026272|CCNC|892|cyclin C##BC030159|CCNC|892|cyclin C##BC056153|CCNC|892|cyclin C##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.878507	CTCF.p2:-3:0.879
chr11	80438529	80438646	reg1001988.p2	15.320	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-1286863	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-2152692	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-2152795	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	2006311	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	2172930	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	2174187	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.218571	CTCF.p2:-7:0.219
chr14	76819225	76819354	reg1001885.p1	15.320	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-200983	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-201012	+	TSC_hg19_v1_chr14_+_76618258 NM_017926 NM_017972 BC058032	-201033	+	NM_004452	18400	+	TSC_hg19_v1_chr14_+_77227817 AK094330	408511	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	409166	+	AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_017926|C14orf118|55668|chromosome 14 open reading frame 118##NM_017972|C14orf118|55668|chromosome 14 open reading frame 118##BC058032|C14orf118|55668|chromosome 14 open reading frame 118##NM_004452|ESRRB|2103|estrogen-related receptor beta##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1	0.996027	CTCF.p2:5:0.996
chr19	8223501	8223632	reg1001774.p2	15.320	+	AB384635 AB053450 BC153882 NM_032447	-11191	-	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	-105619	+	AK292662 NM_001201359 NM_005624	-105921	+	TSC_hg19_v1_chr19_+_8274253 NM_024552 AK222621 AK225394 AK022151 BC063621	50682	+	TSC_hg19_v1_chr19_-_8373195 CR457174 EU831651 BC036814 BC007083 AY358420 AL365455 BC000668 AK222623 AK315656 AL136652 AK058014 AF161254 NM_001165895 NM_016579	149643	-	TSC_hg19_v1_chr19_-_8386260 AF050637 CR456915 CR542266 BC107892 AF054178	162691	-	AB053450|FBN3|84467|fibrillin 3##BC153882|FBN3|84467|fibrillin 3##NM_032447|FBN3|84467|fibrillin 3##BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25##AK292662|CCL25|6370|chemokine (C-C motif) ligand 25##NM_001201359|CCL25|6370|chemokine (C-C motif) ligand 25##NM_005624|CCL25|6370|chemokine (C-C motif) ligand 25##NM_024552|CERS4|79603|ceramide synthase 4##AK222621|CERS4|79603|ceramide synthase 4##AK225394|CERS4|79603|ceramide synthase 4##AK022151|CERS4|79603|ceramide synthase 4##BC063621|CERS4|79603|ceramide synthase 4##CR457174|CD320|51293|CD320 molecule##EU831651|CD320|51293|CD320 molecule##BC036814|CD320|51293|CD320 molecule##BC007083|CD320|51293|CD320 molecule##AY358420|CD320|51293|CD320 molecule##AL365455|CD320|51293|CD320 molecule##BC000668|CD320|51293|CD320 molecule##AK222623|CD320|51293|CD320 molecule##AK315656|CD320|51293|CD320 molecule##AL136652|CD320|51293|CD320 molecule##AK058014|CD320|51293|CD320 molecule##AF161254|CD320|51293|CD320 molecule##NM_001165895|CD320|51293|CD320 molecule##NM_016579|CD320|51293|CD320 molecule##AF050637|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR456915|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR542266|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##BC107892|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##AF054178|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa	0.991325	CTCF.p2:-13:0.991
chr20	4741333	4741454	reg1001586.p1	15.319	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	-38859	+	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	-74417	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	-511803	-	AY154472 NM_170774	54375	-	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	62801	-	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	240767	-	AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	0.928601	CTCF.p2:-11:0.929
chr11	26003702	26003818	reg1001882.p1	15.318	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-1485111	+	NM_001195637	-3121789	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-3152415	-	NM_031418 AK302659	349970	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	589980	-	BC049207 NM_178498	739799	-	AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	0.478813	CTCF.p2:-18:0.479
chr1	203473914	203474038	reg1002593.p1	15.318	+	AJ133790 AY077681 NM_014359 AF161702	-10695	+	U29089 BC032498 TSC_hg19_v1_chr1_+_203444965	-29016	+	NM_002725 NM_201348 TSC_hg19_v1_chr1_+_203444937	-29067	+	TSC_hg19_v1_chr1_+_203595922 NM_001001396 NM_001684	121933	+	TSC_hg19_v1_chr1_+_203595959 CR936708 CR749393	121983	+	TSC_hg19_v1_chr1_+_203596243 BC140774	122256	+	AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin##U29089|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##BC032498|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_002725|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_201348|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_001001396|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_001684|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR936708|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR749393|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##BC140774|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4	0.999796	CTCF.p2:9:1.000
chr18	55789252	55789367	reg1001402.p2	15.318	+	AF385931 NM_001144964	-74852	+	TSC_hg19_v1_chr18_+_55712924 AY243322	-76402	+	DQ890913 DQ893350 AY312514 TSC_hg19_v1_chr18_+_55711911	-77403	+	TSC_hg19_v1_chr18_+_55816551 AY112983 AY112984 DQ181796 NM_001144965 NM_001144968 NM_001144969 NM_001144971 AY112985	27248	+	TSC_hg19_v1_chr18_+_55862636 NM_001144970 AK294963 AY243318 AB007899	73421	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	99453	+	AF385931|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144964|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243322|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112983|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112984|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ181796|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144965|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144968|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144969|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144971|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112985|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.996792	CTCF.p2:9:0.997
chr2	26174020	26174135	reg1001804.p1	15.318	+	TSC_hg19_v1_chr2_-_26101329 BX648218 CR933613 BX647527	-72654	-	TSC_hg19_v1_chr2_-_26101321 AB051472 NM_018263	-72763	-	TSC_hg19_v1_chr2_-_26101174 AB084279	-72904	-	BC092406 TSC_hg19_v1_chr2_-_26205366 AK293738 AK315324 BC042486 BX571741	31270	-	TSC_hg19_v1_chr2_-_26205437 NM_002254	31363	-	NM_016131 TSC_hg19_v1_chr2_+_26256952 AL136650 AK023223	82777	+	BX648218|ASXL2|55252|additional sex combs like 2 (Drosophila)##CR933613|ASXL2|55252|additional sex combs like 2 (Drosophila)##BX647527|ASXL2|55252|additional sex combs like 2 (Drosophila)##AB051472|ASXL2|55252|additional sex combs like 2 (Drosophila)##NM_018263|ASXL2|55252|additional sex combs like 2 (Drosophila)##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)##BC092406|KIF3C|3797|kinesin family member 3C##AK293738|KIF3C|3797|kinesin family member 3C##AK315324|KIF3C|3797|kinesin family member 3C##BC042486|KIF3C|3797|kinesin family member 3C##BX571741|KIF3C|3797|kinesin family member 3C##NM_002254|KIF3C|3797|kinesin family member 3C##NM_016131|RAB10|10890|RAB10, member RAS oncogene family##AL136650|RAB10|10890|RAB10, member RAS oncogene family##AK023223|RAB10|10890|RAB10, member RAS oncogene family	0.991959	CTCF.p2:-18:0.992
chr7	47305959	47306083	reg1002589.p1	15.317	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-1345215	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-1372887	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-1377916	+	TSC_hg19_v1_chr7_-_47579207 BC071791	273188	-	TSC_hg19_v1_chr7_-_47621681 CR749644	315642	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	315762	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.998495	CTCF.p2:-7:0.998
chr16	67294687	67294831	reg1002607.p1	15.316	+	BC144131 AF111173 NM_004594 BC150207 BC142671	-11927	+	AK301157 TSC_hg19_v1_chr16_-_67281421 NM_013241	-13333	-	TSC_hg19_v1_chr16_-_67281395 AB041046	-13365	-	AB197663 AB197664 NM_015432	16653	+	TSC_hg19_v1_chr16_+_67312061 NM_001129727 BC082974 AK024475	17351	+	TSC_hg19_v1_chr16_+_67312688 BC001520	17955	+	BC144131|SLC9A5|6553|solute carrier family 9 (sodium/hydrogen exchanger), member 5##AF111173|SLC9A5|6553|solute carrier family 9 (sodium/hydrogen exchanger), member 5##NM_004594|SLC9A5|6553|solute carrier family 9 (sodium/hydrogen exchanger), member 5##BC150207|SLC9A5|6553|solute carrier family 9 (sodium/hydrogen exchanger), member 5##BC142671|SLC9A5|6553|solute carrier family 9 (sodium/hydrogen exchanger), member 5##AK301157|FHOD1|29109|formin homology 2 domain containing 1##NM_013241|FHOD1|29109|formin homology 2 domain containing 1##AB041046|FHOD1|29109|formin homology 2 domain containing 1##AB197663|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##AB197664|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_015432|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129727|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC082974|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##AK024475|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC001520|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4	0.985591	CTCF.p2:-8:0.986
chr21	42655286	42655419	reg1002196.p1	15.314	+	AK092431 AX747543 NM_182832	-98187	-	TSC_hg19_v1_chr21_+_42540092 AY358927 AF117892 BC014453 AF204944 AF200192 AB590241 DQ895416 EU176330 AF200342	-115211	+	AK075539 AK292056 AF050171 TSC_hg19_v1_chr21_+_42540086	-115282	+	AK302095 BC036314 TSC_hg19_v1_chr21_+_42676236	20854	+	AK125528 NM_058186 NM_206964 TSC_hg19_v1_chr21_+_42688738 BC057829 AF375989 AJ409094 AY040086 AY358459 HQ257913 AF494379	33381	+	TSC_hg19_v1_chr21_+_42733956 M30818 NM_002463 AK308060 AK126107	78586	+	AK092431|PLAC4|191585|placenta-specific 4##NM_182832|PLAC4|191585|placenta-specific 4##AY358927|BACE2|25825|beta-site APP-cleaving enzyme 2##AF117892|BACE2|25825|beta-site APP-cleaving enzyme 2##BC014453|BACE2|25825|beta-site APP-cleaving enzyme 2##AF204944|BACE2|25825|beta-site APP-cleaving enzyme 2##AF200192|BACE2|25825|beta-site APP-cleaving enzyme 2##DQ895416|BACE2|25825|beta-site APP-cleaving enzyme 2##EU176330|BACE2|25825|beta-site APP-cleaving enzyme 2##AF200342|BACE2|25825|beta-site APP-cleaving enzyme 2##AK075539|BACE2|25825|beta-site APP-cleaving enzyme 2##AK292056|BACE2|25825|beta-site APP-cleaving enzyme 2##AF050171|BACE2|25825|beta-site APP-cleaving enzyme 2##BC036314|FAM3B|54097|family with sequence similarity 3, member B##AK125528|FAM3B|54097|family with sequence similarity 3, member B##NM_058186|FAM3B|54097|family with sequence similarity 3, member B##NM_206964|FAM3B|54097|family with sequence similarity 3, member B##BC057829|FAM3B|54097|family with sequence similarity 3, member B##AF375989|FAM3B|54097|family with sequence similarity 3, member B##AJ409094|FAM3B|54097|family with sequence similarity 3, member B##AY040086|FAM3B|54097|family with sequence similarity 3, member B##AY358459|FAM3B|54097|family with sequence similarity 3, member B##HQ257913|FAM3B|54097|family with sequence similarity 3, member B##AF494379|FAM3B|54097|family with sequence similarity 3, member B##M30818|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##NM_002463|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK308060|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK126107|LOC100131190|100131190|uncharacterized LOC100131190	0.84275	CTCF.p2:-9:0.843
chr12	27037996	27038133	reg1002482.p1	15.313	+	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	-51984	-	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-689479	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-689773	+	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	52845	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	53166	-	NM_001171887 NM_001171888 NM_015633 AK001534 TSC_hg19_v1_chr12_+_27091402 BC032143 AF161472	53311	+	AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_001171887|FGFR1OP2|26127|FGFR1 oncogene partner 2##NM_001171888|FGFR1OP2|26127|FGFR1 oncogene partner 2##NM_015633|FGFR1OP2|26127|FGFR1 oncogene partner 2##AK001534|FGFR1OP2|26127|FGFR1 oncogene partner 2##BC032143|FGFR1OP2|26127|FGFR1 oncogene partner 2##AF161472|FGFR1OP2|26127|FGFR1 oncogene partner 2	0.999108	CTCF.p2:7:0.999
chr5	153344720	153344845	reg1002565.p1	15.313	+	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	-474517	+	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	-1560031	-	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	-2040420	-	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	73675	-	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	73742	+	TSC_hg19_v1_chr5_+_153418558 AK315573 BC026244	73778	+	NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3##AK315573|MFAP3|4238|microfibrillar-associated protein 3##BC026244|MFAP3|4238|microfibrillar-associated protein 3	0.971193	CTCF.p2:9:0.971
chr7	134317848	134317955	reg1001887.p2	15.312	+	NM_001080538	-84053	+	AF524864 NM_020299 BC008837	-105531	+	TSC_hg19_v1_chr7_-_134143878 AK313439 BC000260 NM_001628 AK311339	-173937	-	NM_001724 NM_199186 TSC_hg19_v1_chr7_+_134331586 BC017050 AK315439 AK097778 X04327	13684	+	TSC_hg19_v1_chr7_+_134464170 NM_004342 NM_033138 NM_033157 AK289686	146265	+	TSC_hg19_v1_chr7_+_134464387 AK298524 AK304729 AF247820 M83216	146488	+	NM_001080538|AKR1B15|441282|aldo-keto reductase family 1, member B15##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##AK313439|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC000260|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001628|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK311339|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001724|BPGM|669|2,3-bisphosphoglycerate mutase##NM_199186|BPGM|669|2,3-bisphosphoglycerate mutase##BC017050|BPGM|669|2,3-bisphosphoglycerate mutase##AK315439|BPGM|669|2,3-bisphosphoglycerate mutase##AK097778|BPGM|669|2,3-bisphosphoglycerate mutase##X04327|BPGM|669|2,3-bisphosphoglycerate mutase##NM_004342|CALD1|800|caldesmon 1##NM_033138|CALD1|800|caldesmon 1##NM_033157|CALD1|800|caldesmon 1##AK289686|CALD1|800|caldesmon 1##AK298524|CALD1|800|caldesmon 1##AK304729|CALD1|800|caldesmon 1##AF247820|CALD1|800|caldesmon 1##M83216|CALD1|800|caldesmon 1	0.691652	CTCF.p2:-7:0.692
chr1	206718265	206718392	reg1001592.p1	15.311	+	TSC_hg19_v1_chr1_+_206680863 AK291268 AY062002 AY062003 BC004270 BC007203 NM_182663 NM_182664 AB209145 DQ892961 DQ896208	-37427	+	TSC_hg19_v1_chr1_+_206680860 AK289861	-37467	+	TSC_hg19_v1_chr1_+_206643833 BC105923 BC105924 BC107591 BC107812 D63485	-74483	+	TSC_hg19_v1_chr1_+_206730491 NM_182665 AF445801	12147	+	TSC_hg19_v1_chr1_+_206730542 BC042651 AY216268	12192	+	AL832784 AY261332 AK292039 TSC_hg19_v1_chr1_+_206730613	12280	+	AK291268|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY062002|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY062003|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC004270|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC007203|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##NM_182663|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##NM_182664|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AB209145|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##DQ892961|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##DQ896208|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AK289861|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC105923|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC105924|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC107591|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC107812|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##D63485|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_182665|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AF445801|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC042651|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY216268|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AL832784|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY261332|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AK292039|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5	0.3961	CTCF.p2:-24:0.396
chr20	43238726	43238868	reg1002639.p1	15.311	+	AK309209 TSC_hg19_v1_chr20_+_43211227	-27574	+	NM_007066 NM_181804 NM_181805 BC104256 BC104257 TSC_hg19_v1_chr20_+_43160482 AK312048 AF182032	-78281	+	AK295120 AK309993 TSC_hg19_v1_chr20_-_43150704 NM_006811 NM_198941	-88090	-	AB528992 DQ892681 DQ895924 TSC_hg19_v1_chr20_-_43280341 X02994 AK223397	41501	-	BC007678 TSC_hg19_v1_chr20_-_43280372 BC040226 NM_000022	41578	-	BC058074 TSC_hg19_v1_chr20_+_43343549 AK074695	104745	+	AK309209|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_007066|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_181804|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_181805|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##BC104256|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##BC104257|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AK312048|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AF182032|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AK295120|SERINC3|10955|serine incorporator 3##AK309993|SERINC3|10955|serine incorporator 3##NM_006811|SERINC3|10955|serine incorporator 3##NM_198941|SERINC3|10955|serine incorporator 3##DQ892681|ADA|100|adenosine deaminase##DQ895924|ADA|100|adenosine deaminase##X02994|ADA|100|adenosine deaminase##AK223397|ADA|100|adenosine deaminase##BC007678|ADA|100|adenosine deaminase##BC040226|ADA|100|adenosine deaminase##NM_000022|ADA|100|adenosine deaminase##BC058074|WISP2|8839|WNT1 inducible signaling pathway protein 2	0.86974	CTCF.p2:13:0.655	CTCF.p2:-94:0.215
chr2	30431395	30431509	reg1001166.p1	15.311	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-61576	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	-61619	+	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	-61682	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	23050	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	238696	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	598841	-	AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13	0.894955	CTCF.p2:-30:0.895
chr3	114811102	114811244	reg1001736.p1	15.310	+	BC090936 NM_001164343	-20933	-	AK225788 NM_001164344 NM_001164345	-333053	-	AK315307 NM_001164346 TSC_hg19_v1_chr3_-_114343793	-467379	-	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	54941	-	NM_001130064 NM_002045	530977	+	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	531246	+	BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20##AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20##BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43	0.97438	CTCF.p2:-7:0.974
chr3	16592385	16592509	reg1001245.p2	15.310	+	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	-37223	-	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	-37429	-	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-285739	+	BX648638 AK303026 NM_001190811	53823	-	U65918 U66726 U66078 BC027595 NM_001351	54519	-	AB029015 NM_001144382	334004	+	D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2	0.791761	CTCF.p2:12:0.792
chr11	11049763	11049890	reg1002599.p1	15.309	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-170040	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-170308	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-219029	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	593752	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	813190	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	813665	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.985141	CTCF.p2:-4:0.985
chr17	79116639	79116751	reg1002440.p1	15.309	+	AB014541 NM_004920 TSC_hg19_v1_chr17_-_79105774	-10933	-	BC032559 BC014020 AB015019 AB015020 AB017119 AB017120 U70669 TSC_hg19_v1_chr17_+_79008989 BC002495 DQ893456 DQ896329 AB528742 CU680744 CU689422	-107690	+	TSC_hg19_v1_chr17_+_79008950 NM_001144888 NM_006340 NM_017450 NM_017451 AK298629 AK023688 AK222670 AK225612 AK297644	-107746	+	AK131529 NM_001080395 TSC_hg19_v1_chr17_-_79139926	23210	-	TSC_hg19_v1_chr17_-_79196766 BC136578 BC136580 BC144263 BC012130 NM_001009811 NM_014984 AB029041	80071	-	TSC_hg19_v1_chr17_-_79212861 AK128728 BC064483 BC042155 AK056090	96128	-	AB014541|AATK|9625|apoptosis-associated tyrosine kinase##NM_004920|AATK|9625|apoptosis-associated tyrosine kinase##BC032559|BAIAP2|10458|BAI1-associated protein 2##BC014020|BAIAP2|10458|BAI1-associated protein 2##AB015019|BAIAP2|10458|BAI1-associated protein 2##AB015020|BAIAP2|10458|BAI1-associated protein 2##AB017119|BAIAP2|10458|BAI1-associated protein 2##AB017120|BAIAP2|10458|BAI1-associated protein 2##U70669|BAIAP2|10458|BAI1-associated protein 2##BC002495|BAIAP2|10458|BAI1-associated protein 2##DQ893456|BAIAP2|10458|BAI1-associated protein 2##DQ896329|BAIAP2|10458|BAI1-associated protein 2##NM_001144888|BAIAP2|10458|BAI1-associated protein 2##NM_006340|BAIAP2|10458|BAI1-associated protein 2##NM_017450|BAIAP2|10458|BAI1-associated protein 2##NM_017451|BAIAP2|10458|BAI1-associated protein 2##AK298629|BAIAP2|10458|BAI1-associated protein 2##AK023688|BAIAP2|10458|BAI1-associated protein 2##AK222670|BAIAP2|10458|BAI1-associated protein 2##AK225612|BAIAP2|10458|BAI1-associated protein 2##AK297644|BAIAP2|10458|BAI1-associated protein 2##AK131529|AATK|9625|apoptosis-associated tyrosine kinase##NM_001080395|AATK|9625|apoptosis-associated tyrosine kinase##BC136578|AZI1|22994|5-azacytidine induced 1##BC136580|AZI1|22994|5-azacytidine induced 1##BC144263|AZI1|22994|5-azacytidine induced 1##BC012130|AZI1|22994|5-azacytidine induced 1##NM_001009811|AZI1|22994|5-azacytidine induced 1##NM_014984|AZI1|22994|5-azacytidine induced 1##AB029041|AZI1|22994|5-azacytidine induced 1##AK128728|C17orf56|146705|chromosome 17 open reading frame 56##BC064483|C17orf56|146705|chromosome 17 open reading frame 56##BC042155|C17orf56|146705|chromosome 17 open reading frame 56##AK056090|C17orf56|146705|chromosome 17 open reading frame 56	0.999179	CTCF.p2:-3:0.999
chr1	201482196	201482310	reg1001506.p1	15.308	+	TSC_hg19_v1_chr1_+_201476345 AK097932	-5892	+	TSC_hg19_v1_chr1_-_201476252 AK057876 AK122812 AK302237 AK304415 NM_001193570 NM_004078	-5936	-	BC018806 TSC_hg19_v1_chr1_-_201476245	-6010	-	AY043013 NM_020443 TSC_hg19_v1_chr1_+_201617460	135202	+	TSC_hg19_v1_chr1_+_201617793 BC117683 AJ488101	135475	+	TSC_hg19_v1_chr1_+_201708656 AK056158	226399	+	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1##AK122812|CSRP1|1465|cysteine and glycine-rich protein 1##AK302237|CSRP1|1465|cysteine and glycine-rich protein 1##AK304415|CSRP1|1465|cysteine and glycine-rich protein 1##NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1##NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1##BC018806|CSRP1|1465|cysteine and glycine-rich protein 1##AY043013|NAV1|89796|neuron navigator 1##NM_020443|NAV1|89796|neuron navigator 1##BC117683|NAV1|89796|neuron navigator 1##AJ488101|NAV1|89796|neuron navigator 1##AK056158|NAV1|89796|neuron navigator 1	1.863186	CTCF.p2:-2:0.979	CTCF.p2:43:0.884
chr19	734157	734283	reg1002649.p1	15.308	+	TSC_hg19_v1_chr19_+_708934 NM_001040134 NM_002579 AK299809 AK315168 BC032449 Y14770	-25271	+	BC137161 BC144505 NM_214710	-38760	-	TSC_hg19_v1_chr19_+_676391 NM_005860 AK291958 AK313341 BC005839 AY358917 BC033119 U76702	-57836	+	TSC_hg19_v1_chr19_+_751132 BC052236 BX648389 BC042125 NM_173481	16909	+	TSC_hg19_v1_chr19_+_797414 NM_002819 NM_031990 NM_031991 NM_175847 X66975 BC002397 BC023219	63196	+	TSC_hg19_v1_chr19_+_797446 AB208910	63225	+	NM_001040134|PALM|5064|paralemmin##NM_002579|PALM|5064|paralemmin##AK315168|PALM|5064|paralemmin##BC032449|PALM|5064|paralemmin##Y14770|PALM|5064|paralemmin##BC137161|PRSS57|400668|protease, serine, 57##BC144505|PRSS57|400668|protease, serine, 57##NM_214710|PRSS57|400668|protease, serine, 57##NM_005860|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##AK291958|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##AK313341|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##BC005839|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##AY358917|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##BC033119|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##U76702|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##BC052236|C19orf21|126353|chromosome 19 open reading frame 21##BX648389|C19orf21|126353|chromosome 19 open reading frame 21##BC042125|C19orf21|126353|chromosome 19 open reading frame 21##NM_173481|C19orf21|126353|chromosome 19 open reading frame 21##NM_002819|PTBP1|5725|polypyrimidine tract binding protein 1##NM_031990|PTBP1|5725|polypyrimidine tract binding protein 1##NM_031991|PTBP1|5725|polypyrimidine tract binding protein 1##NM_175847|PTBP1|5725|polypyrimidine tract binding protein 1##X66975|PTBP1|5725|polypyrimidine tract binding protein 1##BC002397|PTBP1|5725|polypyrimidine tract binding protein 1##BC023219|PTBP1|5725|polypyrimidine tract binding protein 1##AB208910|PTBP1|5725|polypyrimidine tract binding protein 1	0.917513	CTCF.p2:16:0.918
chr20	1418056	1418187	reg1003274.p1	15.308	+	TSC_hg19_v1_chr20_-_1373754 BC119733 BC119732 NM_000801 NM_001199786 NM_054014	-44339	-	TSC_hg19_v1_chr20_-_1373733 D28444 M34539 AK309026	-44399	-	TSC_hg19_v1_chr20_-_1373659 AF205192 AB241123 AB241124 AB241125 BT007066 CR407613 CR542168 DQ891819 AB463639 X52220 BC005147 BC001925	-44489	-	TSC_hg19_v1_chr20_-_1447490 AB590363 CU678204 DQ893189 DQ896513 AK001511 AF078856 AF086909 AF112211 AK223334 AK297403 AK315433 AF283774 AK223341	29356	-	TSC_hg19_v1_chr20_-_1447590 BC002801	29486	-	AK093845 NM_001206736 NM_016143 NM_018839	30215	-	BC119733|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC119732|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_000801|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_001199786|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_054014|FKBP1A|2280|FK506 binding protein 1A, 12kDa##D28444|FKBP1A|2280|FK506 binding protein 1A, 12kDa##M34539|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AK309026|FKBP1A-SDCBP2|100528031|FKBP1A-SDCBP2 readthrough (non-protein coding)##AF205192|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241123|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241124|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241125|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BT007066|FKBP1A|2280|FK506 binding protein 1A, 12kDa##CR407613|FKBP1A|2280|FK506 binding protein 1A, 12kDa##CR542168|FKBP1A|2280|FK506 binding protein 1A, 12kDa##DQ891819|FKBP1A|2280|FK506 binding protein 1A, 12kDa##X52220|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC005147|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC001925|FKBP1A|2280|FK506 binding protein 1A, 12kDa##DQ893189|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##DQ896513|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK001511|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF078856|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF086909|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF112211|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223334|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK297403|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK315433|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF283774|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223341|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##BC002801|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK093845|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_001206736|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_016143|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_018839|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	0.830175	CTCF.p2:2:0.830
chr15	59249683	59249840	reg1002634.p1	15.306	+	TSC_hg19_v1_chr15_-_59225851 BC140851 NM_001013843 NM_024755	-23930	-	AK000867 TSC_hg19_v1_chr15_-_59225776 AK055195 BC108656 AK291423 AK131242	-23979	-	BC060514 TSC_hg19_v1_chr15_+_59063500 AK297291 AK075319 AB075509 BC140811 BC144616	-186239	+	TSC_hg19_v1_chr15_+_59279864 BC060862 BX538130 NM_017610	30096	+	BX647259 TSC_hg19_v1_chr15_+_59280332 AK131304	30518	+	TSC_hg19_v1_chr15_+_59359061 AK095327	109317	+	BC140851|SLTM|79811|SAFB-like, transcription modulator##NM_001013843|SLTM|79811|SAFB-like, transcription modulator##NM_024755|SLTM|79811|SAFB-like, transcription modulator##AK000867|SLTM|79811|SAFB-like, transcription modulator##AK055195|SLTM|79811|SAFB-like, transcription modulator##BC108656|SLTM|79811|SAFB-like, transcription modulator##AK291423|SLTM|79811|SAFB-like, transcription modulator##AK131242|SLTM|79811|SAFB-like, transcription modulator##BC060514|FAM63B|54629|family with sequence similarity 63, member B##AK297291|FAM63B|54629|family with sequence similarity 63, member B##AK075319|FAM63B|54629|family with sequence similarity 63, member B##AB075509|FAM63B|54629|family with sequence similarity 63, member B##BC140811|FAM63B|54629|family with sequence similarity 63, member B##BC144616|FAM63B|54629|family with sequence similarity 63, member B##BC060862|RNF111|54778|ring finger protein 111##BX538130|RNF111|54778|ring finger protein 111##NM_017610|RNF111|54778|ring finger protein 111##BX647259|RNF111|54778|ring finger protein 111##AK131304|RNF111|54778|ring finger protein 111##AK095327|RNF111|54778|ring finger protein 111	0.99804	CTCF.p2:-8:0.998
chr7	97735998	97736135	reg1002700.p1	15.306	+	TSC_hg19_v1_chr7_-_97619350 AB528806 NM_006188	-116684	-	TSC_hg19_v1_chr7_-_97601657 BC030024	-134406	-	BC062733 TSC_hg19_v1_chr7_-_97601645 BC029615	-134423	-	TSC_hg19_v1_chr7_+_97736173 AB029002 BC146773 NM_014916 BC131504 AB384558 AB590084 AY130988	270	+	BC113394 BC113396 NM_177455 AB464465	105525	+	TSC_hg19_v1_chr7_-_97881512 AK292996 BC053591 NM_015395 AK057048	145433	-	NM_006188|OCM2|4951|oncomodulin 2##BC062733|MGC72080|389538|MGC72080 pseudogene##BC029615|MGC72080|389538|MGC72080 pseudogene##AB029002|LMTK2|22853|lemur tyrosine kinase 2##BC146773|LMTK2|22853|lemur tyrosine kinase 2##NM_014916|LMTK2|22853|lemur tyrosine kinase 2##BC131504|LMTK2|22853|lemur tyrosine kinase 2##AY130988|LMTK2|22853|lemur tyrosine kinase 2##BC113394|BHLHA15|168620|basic helix-loop-helix family, member a15##BC113396|BHLHA15|168620|basic helix-loop-helix family, member a15##NM_177455|BHLHA15|168620|basic helix-loop-helix family, member a15##AK292996|TECPR1|25851|tectonin beta-propeller repeat containing 1##BC053591|TECPR1|25851|tectonin beta-propeller repeat containing 1##NM_015395|TECPR1|25851|tectonin beta-propeller repeat containing 1##AK057048|TECPR1|25851|tectonin beta-propeller repeat containing 1	0.640402	CTCF.p2:-12:0.640
chr11	19764372	19764483	reg1001893.p1	15.305	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	-29561	+	AB063115 NM_001111018 AJ488205	-392112	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-501226	-	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	279961	+	TSC_hg19_v1_chr11_+_20049136 AK307574	284705	+	AK290458 TSC_hg19_v1_chr11_+_20070637	306196	+	AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##AK290458|NAV2|89797|neuron navigator 2	0.995188	CTCF.p2:11:0.995
chr17	46662825	46662958	reg1001812.p2	15.305	+	TSC_hg19_v1_chr17_-_46655544 AL137449 BC049204 NM_024015	-7248	-	NM_002146 AK027609	-11063	-	EU446481 BC074805 BC074806 X16665 NM_002145	-40558	-	AK315102 TSC_hg19_v1_chr17_-_46667604 AK316245 AK291182	4722	-	AB464575 BC117247 NM_002147 TSC_hg19_v1_chr17_-_46671142 AK314964	8209	-	M92299 TSC_hg19_v1_chr17_-_46671405	8476	-	AL137449|HOXB4|3214|homeobox B4##BC049204|HOXB4|3214|homeobox B4##NM_024015|HOXB4|3214|homeobox B4##NM_002146|HOXB3|3213|homeobox B3##AK027609|HOXB3|3213|homeobox B3##EU446481|HOXB2|3212|homeobox B2##BC074805|HOXB2|3212|homeobox B2##BC074806|HOXB2|3212|homeobox B2##X16665|HOXB2|3212|homeobox B2##NM_002145|HOXB2|3212|homeobox B2##AK315102|HOXB3|3213|homeobox B3##AK316245|HOXB3|3213|homeobox B3##AK291182|HOXB3|3213|homeobox B3##BC117247|HOXB5|3215|homeobox B5##NM_002147|HOXB5|3215|homeobox B5##AK314964|HOXB5|3215|homeobox B5##M92299|HOXB5|3215|homeobox B5	0.0	
chr1	19908852	19908985	reg1002915.p1	15.304	+	NM_001206540 NM_004930 TSC_hg19_v1_chr1_-_19812073	-96829	-	TSC_hg19_v1_chr1_-_19812006 AK125085	-96912	-	TSC_hg19_v1_chr1_-_19811972 AK313113 BC107752	-96951	-	TSC_hg19_v1_chr1_+_19923483 NM_001032363 NM_001204082 NM_001204083 NM_001204088 NM_001204089 AK289456 BC070388 AK094318 BC009927	14561	+	D28352 TSC_hg19_v1_chr1_+_19934590 CU687246	25672	+	AK300872 NM_182744	60804	+	NM_001206540|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_004930|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##AK125085|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##AK313113|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##BC107752|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_001032363|MINOS1|440574|mitochondrial inner membrane organizing system 1##NM_001204082|MINOS1|440574|mitochondrial inner membrane organizing system 1##NM_001204083|MINOS1|440574|mitochondrial inner membrane organizing system 1##NM_001204088|C1orf151-NBL1|100532736|C1orf151-NBL1 readthrough##NM_001204089|C1orf151-NBL1|100532736|C1orf151-NBL1 readthrough##AK289456|C1orf151-NBL1|100532736|C1orf151-NBL1 readthrough##BC070388|MINOS1|440574|mitochondrial inner membrane organizing system 1##AK094318|MINOS1|440574|mitochondrial inner membrane organizing system 1##BC009927|MINOS1|440574|mitochondrial inner membrane organizing system 1##AK300872|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_182744|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	0.99841	CTCF.p2:10:0.998
chr15	32270171	32270283	reg1001999.p1	15.303	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-107284	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-107398	-	AJ430383 NM_130901	-322686	-	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	52516	+	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	637535	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	663687	+	AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)	1.013702	CTCF.p2:-10:0.999
chr5	34898492	34898627	reg1002909.p1	15.301	+	AK058168 NM_144725 AK293829 BC032871 BC057775 AK097766	-59262	+	AY354204 NM_001145523	-210896	+	AK308306 NM_001145521 NM_001145525 BC028681 AY317139	-213925	+	AF074717 TSC_hg19_v1_chr5_-_34915671 BC009804 AJ004974 AJ004975 BC006837 AF073524 AF076841 AF090170 AF084512 AF084513 AF011905	17071	-	TSC_hg19_v1_chr5_-_34915716 AK002112 NM_002853	17187	-	AK303311 TSC_hg19_v1_chr5_+_34915820 AK001962 BC006014 BC001546 NM_018321 AK289610 BX648902 DQ892108 DQ895302 AF347667 AY364243 AY364244	17253	+	AK058168|TTC23L|153657|tetratricopeptide repeat domain 23-like##NM_144725|TTC23L|153657|tetratricopeptide repeat domain 23-like##AK293829|TTC23L|153657|tetratricopeptide repeat domain 23-like##BC032871|TTC23L|153657|tetratricopeptide repeat domain 23-like##BC057775|TTC23L|153657|tetratricopeptide repeat domain 23-like##AK097766|TTC23L|153657|tetratricopeptide repeat domain 23-like##AY354204|RAI14|26064|retinoic acid induced 14##NM_001145523|RAI14|26064|retinoic acid induced 14##AK308306|RAI14|26064|retinoic acid induced 14##NM_001145521|RAI14|26064|retinoic acid induced 14##NM_001145525|RAI14|26064|retinoic acid induced 14##BC028681|RAI14|26064|retinoic acid induced 14##AY317139|RAI14|26064|retinoic acid induced 14##AF074717|RAD1|5810|RAD1 homolog (S. pombe)##BC009804|RAD1|5810|RAD1 homolog (S. pombe)##AJ004974|RAD1|5810|RAD1 homolog (S. pombe)##AJ004975|RAD1|5810|RAD1 homolog (S. pombe)##BC006837|RAD1|5810|RAD1 homolog (S. pombe)##AF073524|RAD1|5810|RAD1 homolog (S. pombe)##AF076841|RAD1|5810|RAD1 homolog (S. pombe)##AF090170|RAD1|5810|RAD1 homolog (S. pombe)##AF084512|RAD1|5810|RAD1 homolog (S. pombe)##AF084513|RAD1|5810|RAD1 homolog (S. pombe)##AF011905|RAD1|5810|RAD1 homolog (S. pombe)##AK002112|RAD1|5810|RAD1 homolog (S. pombe)##NM_002853|RAD1|5810|RAD1 homolog (S. pombe)##AK303311|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AK001962|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##BC006014|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##BC001546|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##NM_018321|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AK289610|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##BX648902|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##DQ892108|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##DQ895302|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AF347667|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AY364243|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AY364244|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)	0.970081	CTCF.p2:9:0.970
chr7	148702967	148703101	reg1002689.p1	15.297	+	TSC_hg19_v1_chr7_-_148581422 AK303637 NM_001203247 NM_001203248 NM_004456 NM_152998	-121608	-	TSC_hg19_v1_chr7_-_148581380 AK314291	-121653	-	TSC_hg19_v1_chr7_-_148581377 AK293239 AK303585	-121657	-	CU674214 DQ893573 DQ894347 TSC_hg19_v1_chr7_-_148725561 BC000425 BC001928 J05016 AK290971	22521	-	BC006344 BC011754 AK313299 TSC_hg19_v1_chr7_-_148725753	22709	-	TSC_hg19_v1_chr7_-_148725766 NM_004911	22738	-	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_001203247|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_001203248|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4##DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4##BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4##BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4##AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4##BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4##BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4##AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4##NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4	1.015683	CTCF.p2:2:0.998
chr12	127359084	127359207	reg1001011.p2	15.296	+	NM_052907	-1547984	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-1809077	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-1809204	+	NM_001136103	1392802	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	1949298	-	BC043528 TSC_hg19_v1_chr12_+_129337985	1978839	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	1.016861	CTCF.p2:3:0.999
chr7	105400810	105400945	reg1001928.p2	15.294	+	AK300338 NM_138495	-81269	-	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	-178942	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	-228231	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	116108	-	TSC_hg19_v1_chr7_+_105517250 AK125261	116387	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	202821	+	AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1##BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##AK125261|CDHR3|222256|cadherin-related family member 3##NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3	0.996763	CTCF.p2:-16:0.997
chr19	6862870	6863009	reg1001549.p1	15.293	+	TSC_hg19_v1_chr19_+_6772811 AB590871	-90131	+	TSC_hg19_v1_chr19_+_6772718 NM_005428 AK225710 AK313307	-90215	+	TSC_hg19_v1_chr19_-_6767447 AK225386 AK292781 AK299406 AK310659 BC006281 AF124249 AY358406 NM_005490 AK290293	-95432	-	BC059395 NM_001974 X81479 AK297003 AK131562 AK290401 AK291518 AK313495 AK297011 CU687372	24658	+	NM_001136507	167654	+	NM_001164419	177244	-	NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225386|SH2D3A|10045|SH2 domain containing 3A##AK292781|SH2D3A|10045|SH2 domain containing 3A##AK299406|SH2D3A|10045|SH2 domain containing 3A##AK310659|SH2D3A|10045|SH2 domain containing 3A##BC006281|SH2D3A|10045|SH2 domain containing 3A##AF124249|SH2D3A|10045|SH2 domain containing 3A##AY358406|SH2D3A|10045|SH2 domain containing 3A##NM_005490|SH2D3A|10045|SH2 domain containing 3A##AK290293|SH2D3A|10045|SH2 domain containing 3A##BC059395|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_001974|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##X81479|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297003|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK131562|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK290401|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK291518|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK313495|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297011|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_001136507|MBD3L5|284428|methyl-CpG binding domain protein 3-like 5##NM_001164419|MBD3L4|653656|methyl-CpG binding domain protein 3-like 4	0.307622	CTCF.p2:7:0.308
chr2	131911691	131911822	reg1002597.p1	15.292	+	TSC_hg19_v1_chr2_+_131862905 AK000790 AK223338 AK293880 AK296008 BC050695 BC001428 BC013991	-48847	+	TSC_hg19_v1_chr2_+_131862874 AK302770	-48885	+	AK126289 NM_001100623 NM_017958	-49337	+	AY462868 AY462871 AY462872 AY462873 NM_001083538 AB464428	64193	+	NM_001077637	209974	-	NM_080386 AK093116 AX747933 AK292253 BC057810	321880	+	AK000790|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK223338|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK293880|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK296008|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##BC050695|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##BC001428|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##BC013991|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK302770|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK126289|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_001100623|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_017958|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AY462868|POTEE|445582|POTE ankyrin domain family, member E##AY462871|POTEE|445582|POTE ankyrin domain family, member E##AY462872|POTEE|445582|POTE ankyrin domain family, member E##AY462873|POTEE|445582|POTE ankyrin domain family, member E##NM_001083538|POTEE|445582|POTE ankyrin domain family, member E##NM_001077637|WTH3DI|150786|RAB6C-like##NM_080386|TUBA3D|113457|tubulin, alpha 3d##AK093116|TUBA3D|113457|tubulin, alpha 3d##AK292253|TUBA3D|113457|tubulin, alpha 3d##BC057810|TUBA3D|113457|tubulin, alpha 3d	0.947119	CTCF.p2:-16:0.805
chr2	31393083	31393214	reg1001645.p1	15.292	+	BC010659 NM_001253826 NM_024572 TSC_hg19_v1_chr2_-_31361621	-31540	-	TSC_hg19_v1_chr2_-_31361366 AK024039	-31782	-	AY358758 AK225808 TSC_hg19_v1_chr2_-_31361308	-31850	-	AK296910 NM_001145122	47246	-	AK316006 NM_014600 TSC_hg19_v1_chr2_+_31456952	63773	+	AK294222 TSC_hg19_v1_chr2_+_31456985	63835	+	BC010659|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253826|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_024572|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AY358758|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AK225808|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AK296910|CAPN14|440854|calpain 14##NM_001145122|CAPN14|440854|calpain 14##AK316006|EHD3|30845|EH-domain containing 3##NM_014600|EHD3|30845|EH-domain containing 3##AK294222|EHD3|30845|EH-domain containing 3	0.069332	
chr1	45118654	45118769	reg1001719.p1	15.291	+	TSC_hg19_v1_chr1_+_45097700 AK296038 AK225180	-20949	+	AK056424 TSC_hg19_v1_chr1_+_44870926 BC034221 NM_018150	-247769	+	TSC_hg19_v1_chr1_-_44820942 AK026596	-297750	-	CR457348 AK026006 AK225405 TSC_hg19_v1_chr1_-_45140099 BC064520 NM_024587 AL832539	21376	-	AK296548 TSC_hg19_v1_chr1_-_45140143 BC007521	21437	-	BC026115 NM_001145636	21682	+	AK296038|RNF220|55182|ring finger protein 220##AK225180|RNF220|55182|ring finger protein 220##AK056424|RNF220|55182|ring finger protein 220##BC034221|RNF220|55182|ring finger protein 220##NM_018150|RNF220|55182|ring finger protein 220##AK026596|ERI3|79033|ERI1 exoribonuclease family member 3##CR457348|TMEM53|79639|transmembrane protein 53##AK026006|TMEM53|79639|transmembrane protein 53##AK225405|TMEM53|79639|transmembrane protein 53##BC064520|TMEM53|79639|transmembrane protein 53##NM_024587|TMEM53|79639|transmembrane protein 53##AL832539|TMEM53|79639|transmembrane protein 53##AK296548|TMEM53|79639|transmembrane protein 53##BC007521|TMEM53|79639|transmembrane protein 53##BC026115|C1orf228|339541|chromosome 1 open reading frame 228##NM_001145636|C1orf228|339541|chromosome 1 open reading frame 228	0.99514	CTCF.p2:6:0.995
chr19	47714090	47714204	reg1001852.p2	15.291	+	TSC_hg19_v1_chr19_+_47634184 AB385085 DQ891751 DQ894932 CU676224 AF110956 BT007290	-79925	+	TSC_hg19_v1_chr19_+_47634171 BC003611	-79986	+	TSC_hg19_v1_chr19_+_47634145 AK315624 AF090385 AF046025 AK090645	-80008	+	U82987 BC136481 TSC_hg19_v1_chr19_-_47734457 AF332558 NM_014417	20198	-	AB590880 AK298837 AF354654 AF354655 AF354656 NM_001127240 NM_001127241 NM_001127242	21793	-	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	45614	+	DQ891751|SAE1|10055|SUMO1 activating enzyme subunit 1##DQ894932|SAE1|10055|SUMO1 activating enzyme subunit 1##AF110956|SAE1|10055|SUMO1 activating enzyme subunit 1##BT007290|SAE1|10055|SUMO1 activating enzyme subunit 1##BC003611|SAE1|10055|SUMO1 activating enzyme subunit 1##AK315624|SAE1|10055|SUMO1 activating enzyme subunit 1##AF090385|SAE1|10055|SUMO1 activating enzyme subunit 1##AF046025|SAE1|10055|SUMO1 activating enzyme subunit 1##AK090645|SAE1|10055|SUMO1 activating enzyme subunit 1##U82987|BBC3|27113|BCL2 binding component 3##BC136481|BBC3|27113|BCL2 binding component 3##AF332558|BBC3|27113|BCL2 binding component 3##NM_014417|BBC3|27113|BCL2 binding component 3##AK298837|BBC3|27113|BCL2 binding component 3##AF354654|BBC3|27113|BCL2 binding component 3##AF354655|BBC3|27113|BCL2 binding component 3##AF354656|BBC3|27113|BCL2 binding component 3##NM_001127240|BBC3|27113|BCL2 binding component 3##NM_001127241|BBC3|27113|BCL2 binding component 3##NM_001127242|BBC3|27113|BCL2 binding component 3##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9	0.670985	CTCF.p2:-4:0.671
chr7	151065320	151065448	reg1002548.p1	15.291	+	TSC_hg19_v1_chr7_+_151038909 AF459743 AY129295 AK293159 AF155099	-26470	+	TSC_hg19_v1_chr7_+_151038874 NM_001243351 NM_016118 AF300717	-26542	+	BX648385 TSC_hg19_v1_chr7_-_150974229 NM_003078 U66619	-91155	-	AK056624 TSC_hg19_v1_chr7_-_151071775	6352	-	TSC_hg19_v1_chr7_-_151107122 NM_198285	41737	-	BC100878 BC100879 BC100880 BC100881 AF445455 NM_144727	71711	-	AF459743|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AY129295|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AK293159|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF155099|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_001243351|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_016118|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF300717|NUB1|51667|negative regulator of ubiquitin-like proteins 1##BX648385|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_003078|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##U66619|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_198285|WDR86|349136|WD repeat domain 86##BC100878|CRYGN|155051|crystallin, gamma N##BC100879|CRYGN|155051|crystallin, gamma N##BC100880|CRYGN|155051|crystallin, gamma N##BC100881|CRYGN|155051|crystallin, gamma N##AF445455|CRYGN|155051|crystallin, gamma N##NM_144727|CRYGN|155051|crystallin, gamma N	0.83179	CTCF.p2:4:0.809
chr1	167569405	167569552	reg1002391.p1	15.289	+	TSC_hg19_v1_chr1_-_167523043 NM_003851	-46415	-	DQ891131 DQ894310 AB463481 AY359071 BC006786 BC008628 TSC_hg19_v1_chr1_-_167523000 AK130006 AK315497 AK075375 AK095456 AF084523	-46487	-	AB590419 CU693020 DQ893778 EU176191 X55510 X55511 X55512 BC025703 AK128376 AK313946 J04132 AK223325 NM_000734 NM_198053	-81705	-	AF545852 TSC_hg19_v1_chr1_+_167599495 NM_052862 AK130798	29935	+	TSC_hg19_v1_chr1_+_167599557 AL137762 BC101536 BC101562 BC143428	30091	+	TSC_hg19_v1_chr1_+_167691226 NM_001146191 NM_003953 NM_024569 AK297112 AK075334 AK307250 AK291249 AY359019 AF181660 AF478447 BC000984 BC007881 AF095727 AF087020 AF092425 AF095726 AK315546 AB527648 AF239756 BT019542 CR542160 HQ447352	121850	+	NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ893778|CD247|919|CD247 molecule##EU176191|CD247|919|CD247 molecule##X55510|CD247|919|CD247 molecule##X55511|CD247|919|CD247 molecule##X55512|CD247|919|CD247 molecule##BC025703|CD247|919|CD247 molecule##AK128376|CD247|919|CD247 molecule##AK313946|CD247|919|CD247 molecule##J04132|CD247|919|CD247 molecule##AK223325|CD247|919|CD247 molecule##NM_000734|CD247|919|CD247 molecule##NM_198053|CD247|919|CD247 molecule##AF545852|RCSD1|92241|RCSD domain containing 1##NM_052862|RCSD1|92241|RCSD domain containing 1##AL137762|RCSD1|92241|RCSD domain containing 1##BC101536|RCSD1|92241|RCSD domain containing 1##BC101562|RCSD1|92241|RCSD domain containing 1##BC143428|RCSD1|92241|RCSD domain containing 1##NM_001146191|MPZL1|9019|myelin protein zero-like 1##NM_003953|MPZL1|9019|myelin protein zero-like 1##NM_024569|MPZL1|9019|myelin protein zero-like 1##AK297112|MPZL1|9019|myelin protein zero-like 1##AK075334|MPZL1|9019|myelin protein zero-like 1##AK307250|MPZL1|9019|myelin protein zero-like 1##AK291249|MPZL1|9019|myelin protein zero-like 1##AY359019|MPZL1|9019|myelin protein zero-like 1##AF181660|MPZL1|9019|myelin protein zero-like 1##AF478447|MPZL1|9019|myelin protein zero-like 1##BC000984|MPZL1|9019|myelin protein zero-like 1##BC007881|MPZL1|9019|myelin protein zero-like 1##AF095727|MPZL1|9019|myelin protein zero-like 1##AF087020|MPZL1|9019|myelin protein zero-like 1##AF092425|MPZL1|9019|myelin protein zero-like 1##AF095726|MPZL1|9019|myelin protein zero-like 1##AK315546|MPZL1|9019|myelin protein zero-like 1##AF239756|MPZL1|9019|myelin protein zero-like 1##BT019542|MPZL1|9019|myelin protein zero-like 1##CR542160|MPZL1|9019|myelin protein zero-like 1##HQ447352|MPZL1|9019|myelin protein zero-like 1	0.642113	CTCF.p2:-11:0.642
chr11	11058505	11058631	reg1002674.p1	15.288	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-178782	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-179050	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-227771	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	585010	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	804448	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	804923	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.960548	CTCF.p2:-2:0.961
chr3	34725471	34725597	reg1002586.p1	15.287	+	TSC_hg19_v1_chr3_+_33840125 AF250394 GQ131806 AB384596 CU676494 CU686637 BT007367	-885363	+	TSC_hg19_v1_chr3_+_33840120 AF151793 BC020066	-885427	+	TSC_hg19_v1_chr3_+_33840081 BC068454 AF349951	-885451	+	TSC_hg19_v1_chr3_+_35681016 BC041385 AK057559	955567	+	BC051828 NM_016300	958314	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	995662	+	AF250394|PDCD6IP|10015|programmed cell death 6 interacting protein##GQ131806|PDCD6IP|10015|programmed cell death 6 interacting protein##BT007367|PDCD6IP|10015|programmed cell death 6 interacting protein##AF151793|PDCD6IP|10015|programmed cell death 6 interacting protein##BC020066|PDCD6IP|10015|programmed cell death 6 interacting protein##BC068454|PDCD6IP|10015|programmed cell death 6 interacting protein##AF349951|PDCD6IP|10015|programmed cell death 6 interacting protein##BC041385|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK057559|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	0.901958	CTCF.p2:10:0.902
chr12	104775754	104775877	reg1001777.p1	15.286	+	TSC_hg19_v1_chr12_+_104697516 NM_001008394 AK098698 BC027612	-78287	+	AK128515 TSC_hg19_v1_chr12_+_104682642 AY344670 AY344671 AY344672 AY344680 AY344094 AY344096 AY344095 AY344678 AF077367 AY344679	-93203	+	D88687 TSC_hg19_v1_chr12_+_104681047 AK295067	-94729	+	TSC_hg19_v1_chr12_+_104850745 NM_001173982 NM_018413 AK313217	74879	+	AK290923 TSC_hg19_v1_chr12_+_104850752	74936	+	TSC_hg19_v1_chr12_+_104850778 BC013315	74956	+	NM_001008394|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK098698|EID3|493861|EP300 interacting inhibitor of differentiation 3##BC027612|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK128515|TXNRD1|7296|thioredoxin reductase 1##AY344670|TXNRD1|7296|thioredoxin reductase 1##AY344096|TXNRD1|7296|thioredoxin reductase 1##AY344095|TXNRD1|7296|thioredoxin reductase 1##AF077367|TXNRD1|7296|thioredoxin reductase 1##AY344679|TXNRD1|7296|thioredoxin reductase 1##D88687|TXNRD1|7296|thioredoxin reductase 1##AK295067|TXNRD1|7296|thioredoxin reductase 1##NM_001173982|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##NM_018413|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK313217|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK290923|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	0.996945	CTCF.p2:-18:0.997
chr15	73992720	73992827	reg1001338.p2	15.285	+	TSC_hg19_v1_chr15_+_73976784 AK296358 AK291721 AK309728	-15988	+	TSC_hg19_v1_chr15_+_73976732 AK298522 AK292711 AK074849	-16031	+	TSC_hg19_v1_chr15_+_73976696 AY358343	-16076	+	BC111368 NM_001039614	51042	-	BC033516 NM_153356 AB449907	173235	+	TSC_hg19_v1_chr15_+_74218789 NM_005576	226016	+	AK296358|CD276|80381|CD276 molecule##AK291721|CD276|80381|CD276 molecule##AK309728|CD276|80381|CD276 molecule##AK298522|CD276|80381|CD276 molecule##AK292711|CD276|80381|CD276 molecule##AK074849|CD276|80381|CD276 molecule##AY358343|CD276|80381|CD276 molecule##BC111368|C15orf59|388135|chromosome 15 open reading frame 59##NM_001039614|C15orf59|388135|chromosome 15 open reading frame 59##BC033516|TBC1D21|161514|TBC1 domain family, member 21##NM_153356|TBC1D21|161514|TBC1 domain family, member 21##AB449907|TBC1D21|161514|TBC1 domain family, member 21##NM_005576|LOXL1|4016|lysyl oxidase-like 1	0.999762	CTCF.p2:5:1.000
chr12	31556176	31556311	reg1002469.p1	15.284	+	BC000024 NM_001135811 NM_021238 TSC_hg19_v1_chr12_-_31479121 NM_001135812	-77104	-	TSC_hg19_v1_chr12_-_31479085 AF212220	-77142	-	BC071966 TSC_hg19_v1_chr12_-_31479052 BC004462 AK027736 AF087885 AK026932 AL157432	-77185	-	TSC_hg19_v1_chr12_-_31743924 BC068580 NM_144973	187675	-	AK290248 NM_001135864	243850	+	BC039535 NM_173802	255877	+	BC000024|FAM60A|58516|family with sequence similarity 60, member A##NM_001135811|FAM60A|58516|family with sequence similarity 60, member A##NM_021238|FAM60A|58516|family with sequence similarity 60, member A##NM_001135812|FAM60A|58516|family with sequence similarity 60, member A##AF212220|FAM60A|58516|family with sequence similarity 60, member A##BC071966|FAM60A|58516|family with sequence similarity 60, member A##BC004462|FAM60A|58516|family with sequence similarity 60, member A##AF087885|FAM60A|58516|family with sequence similarity 60, member A##AK026932|FAM60A|58516|family with sequence similarity 60, member A##AL157432|FAM60A|58516|family with sequence similarity 60, member A##BC068580|DENND5B|160518|DENN/MADD domain containing 5B##NM_144973|DENND5B|160518|DENN/MADD domain containing 5B##AK290248|METTL20|254013|methyltransferase like 20##NM_001135864|METTL20|254013|methyltransferase like 20##BC039535|METTL20|254013|methyltransferase like 20##NM_173802|METTL20|254013|methyltransferase like 20	0.910296	CTCF.p2:-5:0.910
chr3	141179089	141179214	reg1002149.p1	15.283	+	AK311479 TSC_hg19_v1_chr3_+_141105293	-73863	+	TSC_hg19_v1_chr3_+_141087345 AK311501	-91794	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	-136095	+	TSC_hg19_v1_chr3_+_141205882 AK292016 AK301015 AF115573 D78155 D82880 NM_006506	26720	+	TSC_hg19_v1_chr3_+_141457045 NM_001201370 NM_014245 NM_183237	277918	+	TSC_hg19_v1_chr3_+_141457129 AK311982	277969	+	AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK292016|RASA2|5922|RAS p21 protein activator 2##AK301015|RASA2|5922|RAS p21 protein activator 2##AF115573|RASA2|5922|RAS p21 protein activator 2##D78155|RASA2|5922|RAS p21 protein activator 2##D82880|RASA2|5922|RAS p21 protein activator 2##NM_006506|RASA2|5922|RAS p21 protein activator 2##NM_001201370|RNF7|9616|ring finger protein 7##NM_014245|RNF7|9616|ring finger protein 7##NM_183237|RNF7|9616|ring finger protein 7##AK311982|RNF7|9616|ring finger protein 7	0.984242	CTCF.p2:-10:0.984
chr7	73621026	73621159	reg1001127.p1	15.281	+	TSC_hg19_v1_chr7_+_73588685 AK290676 BC066928 D26068 NM_022170 NM_031992 BC010021 BC021214 AB385268 DQ891924 DQ895111 DQ895112	-32389	+	TSC_hg19_v1_chr7_+_73588678 AK314749 AK297651	-32451	+	NM_001204426 TSC_hg19_v1_chr7_+_73507550 AK300382	-113575	+	NM_014146 NM_032463 NM_032464	2994	+	TSC_hg19_v1_chr7_+_73624283 BC001609 AK002099 BC006080	3190	+	TSC_hg19_v1_chr7_+_73624338 AF161531 AF252611 AF252612 AF252614 AK225150 AK290074 AK290916	3244	+	AK290676|EIF4H|7458|eukaryotic translation initiation factor 4H##BC066928|EIF4H|7458|eukaryotic translation initiation factor 4H##D26068|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_022170|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_031992|EIF4H|7458|eukaryotic translation initiation factor 4H##BC010021|EIF4H|7458|eukaryotic translation initiation factor 4H##BC021214|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ891924|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ895111|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ895112|EIF4H|7458|eukaryotic translation initiation factor 4H##AK314749|EIF4H|7458|eukaryotic translation initiation factor 4H##AK297651|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_001204426|LIMK1|3984|LIM domain kinase 1##AK300382|LIMK1|3984|LIM domain kinase 1##NM_014146|LAT2|7462|linker for activation of T cells family, member 2##NM_032463|LAT2|7462|linker for activation of T cells family, member 2##NM_032464|LAT2|7462|linker for activation of T cells family, member 2##BC001609|LAT2|7462|linker for activation of T cells family, member 2##AK002099|LAT2|7462|linker for activation of T cells family, member 2##BC006080|LAT2|7462|linker for activation of T cells family, member 2##AF161531|LAT2|7462|linker for activation of T cells family, member 2##AF252611|LAT2|7462|linker for activation of T cells family, member 2##AF252612|LAT2|7462|linker for activation of T cells family, member 2##AF252614|LAT2|7462|linker for activation of T cells family, member 2##AK225150|LAT2|7462|linker for activation of T cells family, member 2##AK290074|LAT2|7462|linker for activation of T cells family, member 2##AK290916|LAT2|7462|linker for activation of T cells family, member 2	0.997259	CTCF.p2:-7:0.997
chr4	37604775	37604891	reg1001007.p1	15.279	+	AK001879 NM_018302 AK225192	-18964	+	NM_001104629 BC037906	-149258	+	NM_001144990	-358144	+	TSC_hg19_v1_chr4_-_37687999 BC039540 AK075468 NM_001085399 NM_001085400	83140	-	TSC_hg19_v1_chr4_+_37828307 NM_018290 AL136705 AK310927	223467	+	TSC_hg19_v1_chr4_+_37828339 AK223237 AK303374 AF109360 BC010087 AK001845 AK297752 CR457274 CU679607	223510	+	AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##NM_001144990|KIAA1239|57495|KIAA1239##BC039540|RELL1|768211|RELT-like 1##AK075468|RELL1|768211|RELT-like 1##NM_001085399|RELL1|768211|RELT-like 1##NM_001085400|RELL1|768211|RELT-like 1##NM_018290|PGM2|55276|phosphoglucomutase 2##AL136705|PGM2|55276|phosphoglucomutase 2##AK310927|PGM2|55276|phosphoglucomutase 2##AK223237|PGM2|55276|phosphoglucomutase 2##AK303374|PGM2|55276|phosphoglucomutase 2##AF109360|PGM2|55276|phosphoglucomutase 2##BC010087|PGM2|55276|phosphoglucomutase 2##AK001845|PGM2|55276|phosphoglucomutase 2##AK297752|PGM2|55276|phosphoglucomutase 2##CR457274|PGM2|55276|phosphoglucomutase 2	0.990312	CTCF.p2:-22:0.990
chr2	227678018	227678127	reg1001926.p1	15.278	+	TSC_hg19_v1_chr2_-_227664534 S62539	-13573	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	-14593	-	NM_020864 BC131727 AB040919	-1412427	+	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	22658	+	TSC_hg19_v1_chr2_-_228028922 X81053	350830	-	NM_000092	351202	-	S62539|IRS1|3667|insulin receptor substrate 1##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1##X81053|COL4A4|1286|collagen, type IV, alpha 4##NM_000092|COL4A4|1286|collagen, type IV, alpha 4	0.185488	
chr4	162173832	162173965	reg1002883.p1	15.277	+	AK294459 NM_014247	-1984901	+	AK058100 NM_152543	-2217566	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-2483613	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	911253	-	TSC_hg19_v1_chr4_-_164088002 AK097352	1914094	-	TSC_hg19_v1_chr4_-_164088043 AK308601	1914139	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.139479	
chr7	154982446	154982559	reg1001537.p1	15.275	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	-119925	+	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	-187291	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	-187832	-	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	107020	+	AK291675 TSC_hg19_v1_chr7_+_155089667	107142	+	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	268262	+	BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##AK291675|INSIG1|3638|insulin induced gene 1##BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2	0.0	
chr1	206663540	206663665	reg1002544.p1	15.274	+	TSC_hg19_v1_chr1_+_206643833 BC105923 BC105924 BC107591 BC107812 D63485	-19757	+	TSC_hg19_v1_chr1_+_206643818 AK093798 AK310737 AY660028	-19796	+	NM_001193321 NM_001193322 NM_014002	-20017	+	TSC_hg19_v1_chr1_+_206680860 AK289861	17259	+	TSC_hg19_v1_chr1_+_206680863 AK291268 AY062002 AY062003 BC004270 BC007203 NM_182663 NM_182664 AB209145 DQ892961 DQ896208	17299	+	TSC_hg19_v1_chr1_+_206730491 NM_182665 AF445801	66873	+	BC105923|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC105924|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC107591|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC107812|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##D63485|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AK093798|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AK310737|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AY660028|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_001193321|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_001193322|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_014002|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AK289861|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AK291268|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY062002|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY062003|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC004270|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC007203|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##NM_182663|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##NM_182664|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AB209145|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##DQ892961|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##DQ896208|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##NM_182665|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AF445801|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5	0.987984	CTCF.p2:-8:0.988
chr2	174267257	174267376	reg1001558.p1	15.274	+	TSC_hg19_v1_chr2_+_174219599 AY029179 NM_031942 NM_145810 AK027642 AK027628 BC027966 AK075134 AK297097 AK300949 AK297245 AL834186 CU693352 AB527763	-47703	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	-326668	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	-326770	+	AK023489 TSC_hg19_v1_chr2_-_174767427	500038	-	X68560 TSC_hg19_v1_chr2_-_174828559 M97191	561231	-	TSC_hg19_v1_chr2_-_174828899 AY070137 NM_001017371	561556	-	AY029179|CDCA7|83879|cell division cycle associated 7##NM_031942|CDCA7|83879|cell division cycle associated 7##NM_145810|CDCA7|83879|cell division cycle associated 7##AK027642|CDCA7|83879|cell division cycle associated 7##AK027628|CDCA7|83879|cell division cycle associated 7##BC027966|CDCA7|83879|cell division cycle associated 7##AK075134|CDCA7|83879|cell division cycle associated 7##AK297097|CDCA7|83879|cell division cycle associated 7##AK300949|CDCA7|83879|cell division cycle associated 7##AK297245|CDCA7|83879|cell division cycle associated 7##AL834186|CDCA7|83879|cell division cycle associated 7##AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##X68560|SP3|6670|Sp3 transcription factor##M97191|SP3|6670|Sp3 transcription factor##AY070137|SP3|6670|Sp3 transcription factor##NM_001017371|SP3|6670|Sp3 transcription factor	0.942838	CTCF.p2:-6:0.943
chr1	204098266	204098384	reg1000765.p1	15.273	+	TSC_hg19_v1_chr1_+_204042242 BC106038 AK304801 BC040649 NM_005686	-56064	+	TSC_hg19_v1_chr1_+_203830776 BC072433 AB464220 M15919	-267534	+	TSC_hg19_v1_chr1_+_203830735 AK312130 BC090951 NM_003094 M37716 X12466 BC002639 S60260	-267580	+	AB073608 AK302145 CU679603 AK293426 AK001623 TSC_hg19_v1_chr1_-_204121116 BC010082	22694	-	TSC_hg19_v1_chr1_-_204121144 NM_018208	22900	-	CR536498 AB464139 CU690486 BC033474 BC047752 NM_000537	37117	-	BC106038|SOX13|9580|SRY (sex determining region Y)-box 13##AK304801|SOX13|9580|SRY (sex determining region Y)-box 13##BC040649|SOX13|9580|SRY (sex determining region Y)-box 13##NM_005686|SOX13|9580|SRY (sex determining region Y)-box 13##BC072433|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##M15919|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##AK312130|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##BC090951|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##NM_003094|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##M37716|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##X12466|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##BC002639|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##AB073608|ETNK2|55224|ethanolamine kinase 2##AK302145|ETNK2|55224|ethanolamine kinase 2##AK293426|ETNK2|55224|ethanolamine kinase 2##AK001623|ETNK2|55224|ethanolamine kinase 2##BC010082|ETNK2|55224|ethanolamine kinase 2##NM_018208|ETNK2|55224|ethanolamine kinase 2##CR536498|REN|5972|renin##BC033474|REN|5972|renin##BC047752|REN|5972|renin##NM_000537|REN|5972|renin	0.9993	CTCF.p2:19:0.999
chr18	71510147	71510270	reg1002189.p1	15.273	+	AF448838 BC050329 NM_001201465 NM_138966	-975399	-	AF448839 NM_138999	-977275	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	-1298478	-	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	304819	-	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	305586	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	448971	-	AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_182511|CBLN2|147381|cerebellin 2 precursor##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15##NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)	0.089915	
chr9	1460277	1460415	reg1001185.p1	15.273	+	AF130729 NM_181872	-409737	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-409976	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-410002	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	554950	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	1161461	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	1161728	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.526343	CTCF.p2:-18:0.526
chr1	45480271	45480409	reg1002709.p1	15.272	+	TSC_hg19_v1_chr1_+_45478442 AK293702	-1889	+	TSC_hg19_v1_chr1_+_45477917 AF104421 AF104422 AF104423 AF104424 AF104425 AF104426 AF104427 AF104428 AF104429 AF104430 AF104431 AF104432 AF104433 AF104434 AF104435 AF104436 AF104437 AF104438 AF104439 AF104440 AK295284 M14016 BX647308 AK225053 AK308996 DQ890688 DQ893870 AB529048 BT006737 CR456976 CR542057	-2414	+	TSC_hg19_v1_chr1_+_45477906 AK291877 AK309446 AK310208 AK309724 AK315878 BC001778	-2442	+	TSC_hg19_v1_chr1_-_45672278 AB040944 NM_020883	191911	-	TSC_hg19_v1_chr1_+_45769564 BC035497	289235	+	NM_032756 BC007293	312220	+	AK293702|UROD|7389|uroporphyrinogen decarboxylase##AF104421|UROD|7389|uroporphyrinogen decarboxylase##AF104422|UROD|7389|uroporphyrinogen decarboxylase##AF104423|UROD|7389|uroporphyrinogen decarboxylase##AF104424|UROD|7389|uroporphyrinogen decarboxylase##AF104425|UROD|7389|uroporphyrinogen decarboxylase##AF104426|UROD|7389|uroporphyrinogen decarboxylase##AF104427|UROD|7389|uroporphyrinogen decarboxylase##AF104428|UROD|7389|uroporphyrinogen decarboxylase##AF104429|UROD|7389|uroporphyrinogen decarboxylase##AF104430|UROD|7389|uroporphyrinogen decarboxylase##AF104431|UROD|7389|uroporphyrinogen decarboxylase##AF104432|UROD|7389|uroporphyrinogen decarboxylase##AF104433|UROD|7389|uroporphyrinogen decarboxylase##AF104434|UROD|7389|uroporphyrinogen decarboxylase##AF104435|UROD|7389|uroporphyrinogen decarboxylase##AF104436|UROD|7389|uroporphyrinogen decarboxylase##AF104437|UROD|7389|uroporphyrinogen decarboxylase##AF104438|UROD|7389|uroporphyrinogen decarboxylase##AF104439|UROD|7389|uroporphyrinogen decarboxylase##AF104440|UROD|7389|uroporphyrinogen decarboxylase##AK295284|UROD|7389|uroporphyrinogen decarboxylase##M14016|UROD|7389|uroporphyrinogen decarboxylase##BX647308|UROD|7389|uroporphyrinogen decarboxylase##AK225053|UROD|7389|uroporphyrinogen decarboxylase##AK308996|UROD|7389|uroporphyrinogen decarboxylase##DQ890688|UROD|7389|uroporphyrinogen decarboxylase##DQ893870|UROD|7389|uroporphyrinogen decarboxylase##BT006737|UROD|7389|uroporphyrinogen decarboxylase##CR456976|UROD|7389|uroporphyrinogen decarboxylase##CR542057|UROD|7389|uroporphyrinogen decarboxylase##AK291877|UROD|7389|uroporphyrinogen decarboxylase##AK309446|UROD|7389|uroporphyrinogen decarboxylase##AK310208|UROD|7389|uroporphyrinogen decarboxylase##AK309724|UROD|7389|uroporphyrinogen decarboxylase##AK315878|UROD|7389|uroporphyrinogen decarboxylase##BC001778|UROD|7389|uroporphyrinogen decarboxylase##AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5##NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5##BC035497|LOC400752|400752|uncharacterized LOC400752##NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	0.993799	CTCF.p2:-10:0.994
chr14	74718348	74718480	reg1003224.p1	15.272	+	AY336059 NM_182894 BC128153	-12218	+	NM_001024674 AK307062 TSC_hg19_v1_chr14_+_74551662 AK055422 AK023979 BC009539	-166746	+	TSC_hg19_v1_chr14_-_74551167 BC032371 NM_005589	-167225	-	BT007412 CR457104 DQ892847 DQ896094 BC012815 TSC_hg19_v1_chr14_-_74769638 AK291332 AK308382 AF009746 AK297934 BX247984 BX248053 NM_005050	51276	-	NM_018228 TSC_hg19_v1_chr14_+_74815173	96755	+	BC053325 AK023213 TSC_hg19_v1_chr14_+_74815209 AK001673	96788	+	AY336059|VSX2|338917|visual system homeobox 2##NM_182894|VSX2|338917|visual system homeobox 2##BC128153|VSX2|338917|visual system homeobox 2##NM_001024674|LIN52|91750|lin-52 homolog (C. elegans)##AK307062|LIN52|91750|lin-52 homolog (C. elegans)##AK055422|LIN52|91750|lin-52 homolog (C. elegans)##AK023979|LIN52|91750|lin-52 homolog (C. elegans)##BC009539|LIN52|91750|lin-52 homolog (C. elegans)##BC032371|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##NM_005589|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##BT007412|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##CR457104|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ892847|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ896094|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BC012815|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK291332|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK308382|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AF009746|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK297934|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX247984|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX248053|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_005050|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_018228|VRTN|55237|vertebrae development homolog (pig)##BC053325|VRTN|55237|vertebrae development homolog (pig)##AK023213|VRTN|55237|vertebrae development homolog (pig)##AK001673|VRTN|55237|vertebrae development homolog (pig)	0.97793	CTCF.p2:5:0.978
chr15	78292530	78292642	reg1001880.p1	15.272	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-367806	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-367887	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-579324	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	77367	-	NM_001101404	92340	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	131176	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.020945	
chr19	17496935	17497036	reg1001540.p2	15.272	+	CU691156 TSC_hg19_v1_chr19_-_17488155 AF348827 BC050365 BC056414 NM_031310 AF326591 AL834363 AK096030 AK313837	-8853	-	NM_001128855 NM_032620 NM_133644 AF360742 AF360743 AY078987 AY078988 AK298485 AK027606 AK291929 BC019261 TSC_hg19_v1_chr19_+_17448396 BC017207 AK311442 AF360744 DQ892217 DQ895413 CU676414 CU677863	-48613	+	NM_001195422 AK297953	-51186	+	CU689786 D28137 NM_004335 AK223124 AK291099 AK303593 TSC_hg19_v1_chr19_-_17516428 BC033873	19434	-	AK311380 AK055623 TSC_hg19_v1_chr19_+_17516630	19581	+	TSC_hg19_v1_chr19_+_17530855 AK057057 AK289487	33863	+	AF348827|PLVAP|83483|plasmalemma vesicle associated protein##BC050365|PLVAP|83483|plasmalemma vesicle associated protein##BC056414|PLVAP|83483|plasmalemma vesicle associated protein##NM_031310|PLVAP|83483|plasmalemma vesicle associated protein##AF326591|PLVAP|83483|plasmalemma vesicle associated protein##AL834363|PLVAP|83483|plasmalemma vesicle associated protein##AK096030|PLVAP|83483|plasmalemma vesicle associated protein##AK313837|PLVAP|83483|plasmalemma vesicle associated protein##NM_001128855|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_032620|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_133644|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360742|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360743|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AY078987|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AY078988|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK298485|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK027606|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK291929|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC019261|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC017207|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK311442|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360744|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##DQ892217|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##DQ895413|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_001195422|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK297953|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##D28137|BST2|684|bone marrow stromal cell antigen 2##NM_004335|BST2|684|bone marrow stromal cell antigen 2##AK223124|BST2|684|bone marrow stromal cell antigen 2##AK291099|BST2|684|bone marrow stromal cell antigen 2##AK303593|BST2|684|bone marrow stromal cell antigen 2##BC033873|BST2|684|bone marrow stromal cell antigen 2##AK311380|LOC100507535|100507535|uncharacterized LOC100507535##AK055623|LOC100507535|100507535|uncharacterized LOC100507535##AK057057|FAM125A|93343|family with sequence similarity 125, member A##AK289487|FAM125A|93343|family with sequence similarity 125, member A	0.976471	CTCF.p2:-2:0.976
chr15	68599117	68599259	reg1001717.p2	15.271	+	TSC_hg19_v1_chr15_+_68570434 AK290167	-28764	+	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	-29095	+	CR457244 DQ891480 EU176598 BC013130 BC010849 TSC_hg19_v1_chr15_-_68522011 AK291175 AK293155 AK000568 AK027604 NM_017882	-77182	-	TSC_hg19_v1_chr15_-_68724505 AF109681 AF137378 NM_001004439 AK292445 AK304778 AK095863	125310	-	TSC_hg19_v1_chr15_+_68871402 NM_006091	272155	+	NM_001190456	309690	+	AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##CR457244|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##DQ891480|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##EU176598|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC013130|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC010849|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK291175|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK293155|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK000568|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK027604|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##NM_017882|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AF109681|ITGA11|22801|integrin, alpha 11##AF137378|ITGA11|22801|integrin, alpha 11##NM_001004439|ITGA11|22801|integrin, alpha 11##AK292445|ITGA11|22801|integrin, alpha 11##AK304778|ITGA11|22801|integrin, alpha 11##AK095863|ITGA11|22801|integrin, alpha 11##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B	0.994622	CTCF.p2:-11:0.995
chr15	94663254	94663375	reg1002269.p1	15.271	+	AB463222 AM392685 BC146682 AK074980 BC140838 BC151132 AL136826 TSC_hg19_v1_chr15_-_93632430 AK074910 AK291365 NM_020211	-1030961	-	NM_001166287	-1031563	-	AK299363 NM_001166283	-1046161	-	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	111544	+	NM_001159643 NM_018349 AY656717 BC131527	178147	+	NM_001159644 BC025708 BC111024 AK002037	235995	+	AM392685|RGMA|56963|RGM domain family, member A##BC146682|RGMA|56963|RGM domain family, member A##AK074980|RGMA|56963|RGM domain family, member A##BC140838|RGMA|56963|RGM domain family, member A##BC151132|RGMA|56963|RGM domain family, member A##AL136826|RGMA|56963|RGM domain family, member A##AK074910|RGMA|56963|RGM domain family, member A##NM_020211|RGMA|56963|RGM domain family, member A##NM_001166287|RGMA|56963|RGM domain family, member A##AK299363|RGMA|56963|RGM domain family, member A##NM_001166283|RGMA|56963|RGM domain family, member A##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2	1.790196	CTCF.p2:-22:0.833	CTCF.p2:34:0.957
chr19	863969	864094	reg1001847.p1	15.271	+	BC034529 BC040146 TSC_hg19_v1_chr19_+_860648 CR536575	-3390	+	TSC_hg19_v1_chr19_+_859675 AB590861 AJ313463 DQ884409 M84526 BC051001	-4336	+	TSC_hg19_v1_chr19_+_859663 BC057807 AK300963 NM_001928	-4370	+	TSC_hg19_v1_chr19_-_893188 BC004554 BC011841 BC017282 AF106934	29168	-	TSC_hg19_v1_chr19_-_893218 NM_005481	29186	-	TSC_hg19_v1_chr19_-_913199 BC012775	49166	-	BC034529|CFD|1675|complement factor D (adipsin)##BC040146|CFD|1675|complement factor D (adipsin)##CR536575|CFD|1675|complement factor D (adipsin)##AJ313463|CFD|1675|complement factor D (adipsin)##DQ884409|CFD|1675|complement factor D (adipsin)##M84526|CFD|1675|complement factor D (adipsin)##BC051001|CFD|1675|complement factor D (adipsin)##BC057807|CFD|1675|complement factor D (adipsin)##AK300963|CFD|1675|complement factor D (adipsin)##NM_001928|CFD|1675|complement factor D (adipsin)##BC004554|MED16|10025|mediator complex subunit 16##BC011841|MED16|10025|mediator complex subunit 16##BC017282|MED16|10025|mediator complex subunit 16##AF106934|MED16|10025|mediator complex subunit 16##NM_005481|MED16|10025|mediator complex subunit 16##BC012775|R3HDM4|91300|R3H domain containing 4	0.061718	
chr5	172359510	172359637	reg1002410.p1	15.270	+	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	-98255	+	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	-161362	-	AF275799 TSC_hg19_v1_chr5_-_172083715	-275930	-	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	26875	+	NM_003945 TSC_hg19_v1_chr5_+_172410801 BC119715 BC119714 AK312068 Y15286	51209	+	TSC_hg19_v1_chr5_+_172410833 CR456856 CR542131	51271	+	NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1##NM_003945|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119715|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119714|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##AK312068|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##Y15286|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR456856|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR542131|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1	0.987275	CTCF.p2:11:0.987
chr22	44389183	44389295	reg1001626.p1	15.269	+	TSC_hg19_v1_chr22_+_44351384 AY189688 AF151809 BC007830 AK222657 BC015200 AK297770 AK312773 CR456483 CU013033 CU013321 AB463278 DQ893124 DQ896401 CU677235	-37845	+	TSC_hg19_v1_chr22_+_44351321 AK001087	-37917	+	NM_015380 TSC_hg19_v1_chr22_+_44351285 BC011681	-37959	+	AF303887 NM_001003828	5851	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	30960	+	AK308443 NM_001243386	32944	+	AY189688|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AF151809|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC007830|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK222657|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC015200|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK297770|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK312773|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CR456483|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013033|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013321|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ893124|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ896401|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK001087|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##NM_015380|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC011681|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AF303887|PARVB|29780|parvin, beta##NM_001003828|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta	0.506626	CTCF.p2:-13:0.507
chr3	119963229	119963349	reg1002279.p1	15.269	+	NM_001168271 NM_153002	-148	-	TSC_hg19_v1_chr3_+_119813618 BC035247	-149619	+	TSC_hg19_v1_chr3_-_119813270 BC012760 NM_001146156 NM_002093	-150138	-	TSC_hg19_v1_chr3_-_120068162 AB528173 AM393236 BC013757 NM_001099678	104852	-	TSC_hg19_v1_chr3_-_120169846 AB527652 D89937 BC000055 U06863 AK300356 AK289388 AK291138 AK311050 AK300436 BX647421 AK312261 NM_007085	206548	-	NM_001168331 NM_004547 BC000855 BC146885 BC146887 BC146927 BC146932 TSC_hg19_v1_chr3_+_120315168	351858	+	NM_001168271|GPR156|165829|G protein-coupled receptor 156##NM_153002|GPR156|165829|G protein-coupled receptor 156##BC012760|GSK3B|2932|glycogen synthase kinase 3 beta##NM_001146156|GSK3B|2932|glycogen synthase kinase 3 beta##NM_002093|GSK3B|2932|glycogen synthase kinase 3 beta##AM393236|LRRC58|116064|leucine rich repeat containing 58##BC013757|LRRC58|116064|leucine rich repeat containing 58##NM_001099678|LRRC58|116064|leucine rich repeat containing 58##BC000055|FSTL1|11167|follistatin-like 1##U06863|FSTL1|11167|follistatin-like 1##AK300356|FSTL1|11167|follistatin-like 1##AK289388|FSTL1|11167|follistatin-like 1##AK291138|FSTL1|11167|follistatin-like 1##AK311050|FSTL1|11167|follistatin-like 1##AK300436|FSTL1|11167|follistatin-like 1##BX647421|FSTL1|11167|follistatin-like 1##AK312261|FSTL1|11167|follistatin-like 1##NM_007085|FSTL1|11167|follistatin-like 1##NM_001168331|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##NM_004547|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC000855|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146885|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146887|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146927|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146932|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa	0.999615	CTCF.p2:0:1.000
chr3	11278436	11278549	reg1001825.p2	15.268	+	TSC_hg19_v1_chr3_+_11267680 NM_001098211	-10819	+	NM_001098212 AK292157 AK312879	-82278	+	AK289412 NM_001098213	-99714	+	BC060802 NM_000861	15892	+	TSC_hg19_v1_chr3_+_11314033 NM_001136031 NM_001144912 NM_006395	35514	+	AK298833 TSC_hg19_v1_chr3_+_11314082 AK075221 AK303694	35585	+	NM_001098211|HRH1|3269|histamine receptor H1##NM_001098212|HRH1|3269|histamine receptor H1##AK292157|HRH1|3269|histamine receptor H1##AK312879|HRH1|3269|histamine receptor H1##AK289412|HRH1|3269|histamine receptor H1##NM_001098213|HRH1|3269|histamine receptor H1##BC060802|HRH1|3269|histamine receptor H1##NM_000861|HRH1|3269|histamine receptor H1##NM_001136031|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_001144912|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_006395|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK298833|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK075221|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK303694|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)	0.998577	CTCF.p2:-15:0.999
chr14	59593992	59594134	reg1002617.p1	15.266	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-489317	+	AK302579 NM_001244193 AK310356 AK302718	-687637	+	NM_014749 BC066647	-699332	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	61341	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	337859	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	337993	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.997552	CTCF.p2:-13:0.998
chrX	46656141	46656279	reg1001995.p1	15.266	+	TSC_hg19_v1_chrX_-_46618608 BC094742	-37580	-	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	-37681	-	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	-222932	+	NM_006915 AJ007590 TSC_hg19_v1_chrX_+_46696391 BC027851	40167	+	BC043348 BC053530 TSC_hg19_v1_chrX_+_46696426	40216	+	TSC_hg19_v1_chrX_+_46696479 AK312555 CU692158	40294	+	BC094742|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC043348|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC053530|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AK312555|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	0.99971	CTCF.p2:13:1.000
chr12	25144545	25144691	reg1002578.p1	15.265	+	TSC_hg19_v1_chr12_-_25102303 AK056255 NM_001178091 NM_001178092 NM_005504	-42282	-	TSC_hg19_v1_chr12_-_25102021 BX647122 AK128527	-42598	-	TSC_hg19_v1_chr12_-_25101988 AK299088	-42662	-	BC035880 NM_001101339 BC046192 BC062789	5794	-	NM_001204126 NM_001204127 NM_006152	60562	+	TSC_hg19_v1_chr12_+_25205520 BC029391 AK303103 AK303256 BC126417 BC144164 BC144165 BC144170	60962	+	AK056255|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178091|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178092|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_005504|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BX647122|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK128527|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK299088|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BC035880|C12orf77|196415|chromosome 12 open reading frame 77##NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77##BC046192|C12orf77|196415|chromosome 12 open reading frame 77##BC062789|C12orf77|196415|chromosome 12 open reading frame 77##NM_001204126|LRMP|4033|lymphoid-restricted membrane protein##NM_001204127|LRMP|4033|lymphoid-restricted membrane protein##NM_006152|LRMP|4033|lymphoid-restricted membrane protein##BC029391|LRMP|4033|lymphoid-restricted membrane protein##AK303103|LRMP|4033|lymphoid-restricted membrane protein##AK303256|LRMP|4033|lymphoid-restricted membrane protein##BC126417|LRMP|4033|lymphoid-restricted membrane protein##BC144164|LRMP|4033|lymphoid-restricted membrane protein##BC144165|LRMP|4033|lymphoid-restricted membrane protein##BC144170|LRMP|4033|lymphoid-restricted membrane protein	0.996971	CTCF.p2:-17:0.997
chr17	8901450	8901573	reg1001761.p2	15.265	+	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	-32530	-	AY725853 AF128881 NM_014308	-85695	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-130527	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	23456	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	577620	-	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	577695	-	AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8	1.097189	CTCF.p2:10:0.995
chr19	17685001	17685140	reg1001410.p1	15.265	+	TSC_hg19_v1_chr19_+_17666507 AK075541 NM_024656	-18559	+	TSC_hg19_v1_chr19_+_17666457 BC108308	-18607	+	TSC_hg19_v1_chr19_+_17666429 AK074941	-18662	+	AB028955 NM_001080421 AB587313 TSC_hg19_v1_chr19_-_17799158	114028	-	TSC_hg19_v1_chr19_+_17830288 AK292555	145220	+	DQ387861 NM_018174 AL834233 BC067115 TSC_hg19_v1_chr19_+_17830310 BC080547 AJ440784 AK027623 BC113952 AK308975	145239	+	AK075541|GLT25D1|79709|glycosyltransferase 25 domain containing 1##NM_024656|GLT25D1|79709|glycosyltransferase 25 domain containing 1##BC108308|GLT25D1|79709|glycosyltransferase 25 domain containing 1##AK074941|GLT25D1|79709|glycosyltransferase 25 domain containing 1##AB028955|UNC13A|23025|unc-13 homolog A (C. elegans)##NM_001080421|UNC13A|23025|unc-13 homolog A (C. elegans)##AK292555|MAP1S|55201|microtubule-associated protein 1S##DQ387861|MAP1S|55201|microtubule-associated protein 1S##NM_018174|MAP1S|55201|microtubule-associated protein 1S##AL834233|MAP1S|55201|microtubule-associated protein 1S##BC067115|MAP1S|55201|microtubule-associated protein 1S##BC080547|MAP1S|55201|microtubule-associated protein 1S##AJ440784|MAP1S|55201|microtubule-associated protein 1S##AK027623|MAP1S|55201|microtubule-associated protein 1S##BC113952|MAP1S|55201|microtubule-associated protein 1S##AK308975|MAP1S|55201|microtubule-associated protein 1S	0.987318	CTCF.p2:22:0.987
chr3	15244327	15244431	reg1001507.p1	15.264	+	TSC_hg19_v1_chr3_-_15140655 AK291288 AK301735 AL833545 NM_022340	-103726	-	TSC_hg19_v1_chr3_-_15140649 BC032628	-103730	-	AB209673 TSC_hg19_v1_chr3_-_15140645	-103745	-	TSC_hg19_v1_chr3_+_15247736 NM_014296	3355	+	TSC_hg19_v1_chr3_+_15247768 AB028639 BC056202 AK314253 CU691130	3575	+	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	129562	-	AK291288|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AK301735|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AL833545|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_022340|ZFYVE20|64145|zinc finger, FYVE domain containing 20##BC032628|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AB209673|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_014296|CAPN7|23473|calpain 7##AB028639|CAPN7|23473|calpain 7##BC056202|CAPN7|23473|calpain 7##AK314253|CAPN7|23473|calpain 7##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	0.164769	
chr4	109102993	109103120	reg1003235.p1	15.263	+	TSC_hg19_v1_chr4_-_109090113 AF288571 AK225772 NM_001130713 NM_001130714 NM_016269	-13257	-	TSC_hg19_v1_chr4_+_109088684 BC020624	-14372	+	AK303272 NM_001166119	-15142	-	BC106009 NM_000995 D28420 TSC_hg19_v1_chr4_+_109541732 BC070208 NM_033625 AK055920 BC001773	438710	+	AY762981 TSC_hg19_v1_chr4_+_109543670	440614	+	TSC_hg19_v1_chr4_+_109571754 NM_021227 BC054857 BC016321 AF161425 AF201937	468697	+	AF288571|LEF1|51176|lymphoid enhancer-binding factor 1##AK225772|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1##NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1##BC020624|LOC641518|641518|uncharacterized LOC641518##AK303272|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1##BC106009|RPL34|6164|ribosomal protein L34##NM_000995|RPL34|6164|ribosomal protein L34##D28420|RPL34|6164|ribosomal protein L34##BC070208|RPL34|6164|ribosomal protein L34##NM_033625|RPL34|6164|ribosomal protein L34##AK055920|RPL34|6164|ribosomal protein L34##BC001773|RPL34|6164|ribosomal protein L34##AY762981|RPL34|6164|ribosomal protein L34##NM_021227|OSTC|58505|oligosaccharyltransferase complex subunit##BC054857|OSTC|58505|oligosaccharyltransferase complex subunit##BC016321|OSTC|58505|oligosaccharyltransferase complex subunit##AF161425|OSTC|58505|oligosaccharyltransferase complex subunit##AF201937|OSTC|58505|oligosaccharyltransferase complex subunit	0.965689	CTCF.p2:8:0.966
chr11	71445566	71445684	reg1002919.p1	15.262	+	BC130498 BC130502 AB126080 NM_001005405	-151711	-	AB126079 BC137550 BC137566 NM_001012710	-169017	+	NM_005553 X63755 BC101744 AB126078 CU686892 BC069531	-186041	+	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	52982	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	79281	-	AF529416 NM_001002035	98620	+	BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11##AB126079|KRTAP5-10|387273|keratin associated protein 5-10##BC137550|KRTAP5-10|387273|keratin associated protein 5-10##BC137566|KRTAP5-10|387273|keratin associated protein 5-10##NM_001012710|KRTAP5-10|387273|keratin associated protein 5-10##NM_005553|KRTAP5-9|3846|keratin associated protein 5-9##X63755|KRTAP5-9|3846|keratin associated protein 5-9##BC101744|KRTAP5-9|3846|keratin associated protein 5-9##AB126078|KRTAP5-9|3846|keratin associated protein 5-9##BC069531|KRTAP5-9|3846|keratin associated protein 5-9##NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1##BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene##AF529416|DEFB108B|245911|defensin, beta 108B##NM_001002035|DEFB108B|245911|defensin, beta 108B	0.991264	CTCF.p2:7:0.991
chr16	14623103	14623214	reg1001435.p2	15.259	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-328960	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-342640	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-458072	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	100870	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	100975	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	103581	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.917458	CTCF.p2:7:0.917
chr8	144129739	144129858	reg1001613.p1	15.259	+	TSC_hg19_v1_chr8_+_144120683 BC073830 AK094450 NM_173687 BC120993 BC063497	-9123	+	TSC_hg19_v1_chr8_+_144102304 BC119708 BC119709 AB529045 U56145	-27471	+	TSC_hg19_v1_chr8_+_144099945 NM_001127213 NM_002346 AK223074 AK129615 AK311983 BC003392 U42376 Z68179	-29856	+	NM_002347	111658	-	BC030192 AB012293 TSC_hg19_v1_chr8_-_144241700	111891	-	BC053355 TSC_hg19_v1_chr8_-_144241739 BC028894 NM_001135655	111941	-	BC073830|C8orf31|286122|chromosome 8 open reading frame 31##AK094450|C8orf31|286122|chromosome 8 open reading frame 31##NM_173687|C8orf31|286122|chromosome 8 open reading frame 31##BC120993|C8orf31|286122|chromosome 8 open reading frame 31##BC063497|C8orf31|286122|chromosome 8 open reading frame 31##BC119708|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119709|LY6E|4061|lymphocyte antigen 6 complex, locus E##U56145|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_001127213|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002346|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK223074|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK129615|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK311983|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC003392|LY6E|4061|lymphocyte antigen 6 complex, locus E##U42376|LY6E|4061|lymphocyte antigen 6 complex, locus E##Z68179|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002347|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H##AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC053355|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC028894|LY6H|4062|lymphocyte antigen 6 complex, locus H##NM_001135655|LY6H|4062|lymphocyte antigen 6 complex, locus H	0.997138	CTCF.p2:35:0.997
chr8	47868699	47868859	reg1001883.p2	15.258	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	-4721174	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-4873132	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-4873146	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	304716	+	TSC_hg19_v1_chr8_+_48173521 AK303579	304740	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	304753	+	AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146	1.182045	CTCF.p2:-22:1.000
chr7	141233240	141233375	reg1002711.p1	15.256	+	NM_001195278	-459276	+	NM_053035 TSC_hg19_v1_chr7_-_140714792	-518521	-	TSC_hg19_v1_chr7_-_140714748 AF078858 BC105793	-518557	-	NM_018238 TSC_hg19_v1_chr7_+_141251215 AK304502 AK001704 AK299131 AK222769 AJ278150 BC009775	17850	+	TSC_hg19_v1_chr7_-_141401967 AB032973 NM_001080392 AB384573	168627	-	AK131218 NM_001105558	174845	+	NM_001195278|LOC100507421|100507421|transmembrane protein 178-like##NM_053035|MRPS33|51650|mitochondrial ribosomal protein S33##AF078858|MRPS33|51650|mitochondrial ribosomal protein S33##BC105793|MRPS33|51650|mitochondrial ribosomal protein S33##NM_018238|AGK|55750|acylglycerol kinase##AK304502|AGK|55750|acylglycerol kinase##AK001704|AGK|55750|acylglycerol kinase##AK299131|AGK|55750|acylglycerol kinase##AK222769|AGK|55750|acylglycerol kinase##AJ278150|AGK|55750|acylglycerol kinase##BC009775|AGK|55750|acylglycerol kinase##AB032973|KIAA1147|57189|KIAA1147##NM_001080392|KIAA1147|57189|KIAA1147##AK131218|WEE2|494551|WEE1 homolog 2 (S. pombe)##NM_001105558|WEE2|494551|WEE1 homolog 2 (S. pombe)	0.994245	CTCF.p2:2:0.994
chr9	126112244	126112366	reg1001593.p2	15.256	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-81417	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	-81485	-	TSC_hg19_v1_chr9_-_125941308 BC002693	-170985	-	NM_173689 AK123000 DQ426866 AY720432	6188	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	580006	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	661578	+	AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein##BC002693|STRBP|55342|spermatid perinuclear RNA binding protein##NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2	0.803699	CTCF.p2:19:0.804
chr17	43176611	43176749	reg1002795.p1	15.255	+	TSC_hg19_v1_chr17_+_43138687 BC006538 BC006569 NM_021079 AF043324 AK291936 AK303517 AB527516 BC008579 AF020500	-37988	+	TSC_hg19_v1_chr17_+_43138673 Y17208 Y17209	-38023	+	TSC_hg19_v1_chr17_-_43138397 BC006472 BC006546 NM_024819	-38268	-	AB075844 AL834392 AB384653 TSC_hg19_v1_chr17_-_43209885 BC072384 AK074240 NM_133373	33135	-	NM_001135704 TSC_hg19_v1_chr17_+_43209980 BC041143	33302	+	AK316359 NM_001135705 NM_001135706 NM_001135707 NM_024722 BC022000 AK296167 TSC_hg19_v1_chr17_+_43213056 AK023384 AK075104 BC029164 AB073387	36377	+	BC006538|NMT1|4836|N-myristoyltransferase 1##BC006569|NMT1|4836|N-myristoyltransferase 1##NM_021079|NMT1|4836|N-myristoyltransferase 1##AF043324|NMT1|4836|N-myristoyltransferase 1##AK291936|NMT1|4836|N-myristoyltransferase 1##AK303517|NMT1|4836|N-myristoyltransferase 1##BC008579|NMT1|4836|N-myristoyltransferase 1##AF020500|NMT1|4836|N-myristoyltransferase 1##Y17208|NMT1|4836|N-myristoyltransferase 1##Y17209|NMT1|4836|N-myristoyltransferase 1##BC006472|DCAKD|79877|dephospho-CoA kinase domain containing##BC006546|DCAKD|79877|dephospho-CoA kinase domain containing##NM_024819|DCAKD|79877|dephospho-CoA kinase domain containing##AB075844|PLCD3|113026|phospholipase C, delta 3##AL834392|PLCD3|113026|phospholipase C, delta 3##BC072384|PLCD3|113026|phospholipase C, delta 3##AK074240|PLCD3|113026|phospholipase C, delta 3##NM_133373|PLCD3|113026|phospholipase C, delta 3##NM_001135704|ACBD4|79777|acyl-CoA binding domain containing 4##BC041143|ACBD4|79777|acyl-CoA binding domain containing 4##AK316359|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135705|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135706|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135707|ACBD4|79777|acyl-CoA binding domain containing 4##NM_024722|ACBD4|79777|acyl-CoA binding domain containing 4##BC022000|ACBD4|79777|acyl-CoA binding domain containing 4##AK296167|ACBD4|79777|acyl-CoA binding domain containing 4##AK023384|ACBD4|79777|acyl-CoA binding domain containing 4##AK075104|ACBD4|79777|acyl-CoA binding domain containing 4##BC029164|ACBD4|79777|acyl-CoA binding domain containing 4##AB073387|ACBD4|79777|acyl-CoA binding domain containing 4	0.988326	CTCF.p2:6:0.988
chr9	37390827	37390969	reg1001939.p1	15.255	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-270315	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-270390	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-270412	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	31808	+	BC010007 TSC_hg19_v1_chr9_-_37465267	74362	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	74497	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.821603	CTCF.p2:-2:0.822
chr10	97453904	97454035	reg1001667.p1	15.254	+	BC068449 DQ278872 NM_001143973 NM_015631	-70	-	BC061582 TSC_hg19_v1_chr10_-_97453684 CU686635 AY359022 AL050022 AK299141 AK075357 AK098295	-323	-	TSC_hg19_v1_chr10_-_97416598 NM_001017423 NM_002860	-37388	-	AJ133133 AJ133134 NM_001098175	17566	+	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	61571	+	AK294399 NM_001130446	213752	+	BC068449|TCTN3|26123|tectonic family member 3##DQ278872|TCTN3|26123|tectonic family member 3##NM_001143973|TCTN3|26123|tectonic family member 3##NM_015631|TCTN3|26123|tectonic family member 3##BC061582|TCTN3|26123|tectonic family member 3##AY359022|TCTN3|26123|tectonic family member 3##AL050022|TCTN3|26123|tectonic family member 3##AK299141|TCTN3|26123|tectonic family member 3##AK075357|TCTN3|26123|tectonic family member 3##AK098295|TCTN3|26123|tectonic family member 3##NM_001017423|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##NM_002860|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131	0.983244	CTCF.p2:-30:0.983
chr6	1437010	1437163	reg1001265.p1	15.253	+	NM_001452 U13220 AB463646	-46961	+	BC053850 NM_033260	-124412	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-743996	-	BC134421 NM_001453	173594	+	TSC_hg19_v1_chr6_+_1611545 BC169307	174488	+	AF040260 NM_001253846	739138	-	NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##BC169307|FOXC1|2296|forkhead box C1##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase	0.391455	CTCF.p2:11:0.391
chr22	31159869	31160017	reg1002297.p1	15.251	+	AF323731 NM_030758 AK097581 AK294007 BC118914 AB051451 AB384622 AF288741	-69098	+	BC031973 TSC_hg19_v1_chr22_+_31063955	-96009	+	TSC_hg19_v1_chr22_-_31063837 BC030987 BC028724 AF461689 AK056074 NM_152511	-96108	-	AB020659 NM_014941	204243	-	AK056480 TSC_hg19_v1_chr22_+_31366813	206794	+	TSC_hg19_v1_chr22_+_31477303 NM_006932 NM_134269 NM_134270 AK128719 AF064238 AJ010306 AY061971 AY061972 Y13492 AK096953 AK293681 BC034237 AK300854	317339	+	AF323731|OSBP2|23762|oxysterol binding protein 2##NM_030758|OSBP2|23762|oxysterol binding protein 2##AK097581|OSBP2|23762|oxysterol binding protein 2##AK294007|OSBP2|23762|oxysterol binding protein 2##BC118914|OSBP2|23762|oxysterol binding protein 2##AB051451|OSBP2|23762|oxysterol binding protein 2##AF288741|OSBP2|23762|oxysterol binding protein 2##BC030987|DUSP18|150290|dual specificity phosphatase 18##BC028724|DUSP18|150290|dual specificity phosphatase 18##AF461689|DUSP18|150290|dual specificity phosphatase 18##AK056074|DUSP18|150290|dual specificity phosphatase 18##NM_152511|DUSP18|150290|dual specificity phosphatase 18##AB020659|MORC2|22880|MORC family CW-type zinc finger 2##NM_014941|MORC2|22880|MORC family CW-type zinc finger 2##NM_006932|SMTN|6525|smoothelin##NM_134269|SMTN|6525|smoothelin##NM_134270|SMTN|6525|smoothelin##AK128719|SMTN|6525|smoothelin##AF064238|SMTN|6525|smoothelin##AJ010306|SMTN|6525|smoothelin##AY061971|SMTN|6525|smoothelin##AY061972|SMTN|6525|smoothelin##Y13492|SMTN|6525|smoothelin##AK096953|SMTN|6525|smoothelin##AK293681|SMTN|6525|smoothelin##BC034237|SMTN|6525|smoothelin##AK300854|SMTN|6525|smoothelin	0.74579	CTCF.p2:-19:0.746
chr5	14727581	14727713	reg1002402.p1	15.249	+	TSC_hg19_v1_chr5_+_14664826 BC015392	-62806	+	TSC_hg19_v1_chr5_+_14664772 NM_138348	-62871	+	AK123396 TSC_hg19_v1_chr5_-_14664742	-62920	-	DQ892588 DQ895806 AK222631 AK315012 BC014526 AF274753 AY358503 TSC_hg19_v1_chr5_-_14871888 AL833238 AB046801 BC009835 NM_054027	144208	-	TSC_hg19_v1_chr5_+_15500291 AB020647 NM_012304	772652	+	BC136424 TSC_hg19_v1_chr5_+_15500549	772897	+	BC015392|FAM105B|90268|family with sequence similarity 105, member B##NM_138348|FAM105B|90268|family with sequence similarity 105, member B##AK123396|LOC728178|728178|uncharacterized LOC728178##DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)##DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)##AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)##AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)##BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)##AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)##AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)##AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)##BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)##NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)##AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7	0.991426	CTCF.p2:-10:0.991
chr19	3429631	3429740	reg1002055.p1	15.248	+	TSC_hg19_v1_chr19_+_3366607 X92857 AB590220 CU680224 DQ893655 DQ895795	-63070	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	-63105	+	TSC_hg19_v1_chr19_+_3366562 NM_001245002 NM_001245004 NM_005597 BC012120	-63130	+	CU680225 TSC_hg19_v1_chr19_-_3462913	33154	-	TSC_hg19_v1_chr19_-_3480524 BC146979 BC146984 NM_001136503	50841	-	BC002817 NM_031304 TSC_hg19_v1_chr19_-_3500673	70964	-	X92857|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ893655|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ895795|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245002|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245004|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_005597|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC012120|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC146979|C19orf77|284422|chromosome 19 open reading frame 77##BC146984|C19orf77|284422|chromosome 19 open reading frame 77##NM_001136503|C19orf77|284422|chromosome 19 open reading frame 77##BC002817|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase##NM_031304|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase	0.982293	CTCF.p2:-3:0.982
chr13	78067143	78067279	reg1002833.p1	15.247	+	NM_015057 TSC_hg19_v1_chr13_-_77901230	-166008	-	TSC_hg19_v1_chr13_-_77601303 AK314442 NM_012158	-465880	-	TSC_hg19_v1_chr13_-_77601295 AL833187 BC063796 BC072448	-465929	-	NM_001160706 NM_003843 NM_144777 BC020726 AF045941 AK025320 AK222720 AK301659	42640	+	TSC_hg19_v1_chr13_+_78271822 NM_001242868	204693	+	AK294201 NM_001040153	205804	+	NM_015057|MYCBP2|23077|MYC binding protein 2##AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3##AL833187|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC063796|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC072448|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_001160706|SCEL|8796|sciellin##NM_003843|SCEL|8796|sciellin##NM_144777|SCEL|8796|sciellin##BC020726|SCEL|8796|sciellin##AF045941|SCEL|8796|sciellin##AK025320|SCEL|8796|sciellin##AK222720|SCEL|8796|sciellin##AK301659|SCEL|8796|sciellin##NM_001242868|SLAIN1|122060|SLAIN motif family, member 1##AK294201|SLAIN1|122060|SLAIN motif family, member 1##NM_001040153|SLAIN1|122060|SLAIN motif family, member 1	0.0	
chr15	31731656	31731778	reg1001849.p2	15.247	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-112379	+	NM_001243538	-208668	-	GQ502181 HM135791 NM_001252020	-278289	-	AJ430383 NM_130901	215824	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	431112	-	TSC_hg19_v1_chr15_-_32162898 AK126002	431226	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.970367	CTCF.p2:-12:0.970
chr9	129320471	129320574	reg1001864.p1	15.247	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-231355	+	AK309713 NM_001134778	-810045	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-810822	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	56239	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	246788	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	302422	+	NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34	0.999589	CTCF.p2:-16:1.000
chr16	30856150	30856274	reg1002380.p1	15.246	+	TSC_hg19_v1_chr16_-_30798510 AB002324 NM_001080417	-57815	-	TSC_hg19_v1_chr16_-_30787317 AK057076	-68881	-	TSC_hg19_v1_chr16_+_30773642 AK297531 AK304521 AK027406 AK293710 BX640763 CR627431 AK291666 AK131310 AK294258 AF122819 AB014561 BC006133 BC011769 BC018647	-82570	+	BC010017 AJ223980 CU691314 TSC_hg19_v1_chr16_-_30905327	49089	-	TSC_hg19_v1_chr16_-_30905377 BC019071 NM_004765	49183	-	TSC_hg19_v1_chr16_-_30905474 BC058863	49324	-	AB002324|ZNF629|23361|zinc finger protein 629##NM_001080417|ZNF629|23361|zinc finger protein 629##AK297531|RNF40|9810|ring finger protein 40##AK304521|RNF40|9810|ring finger protein 40##AK027406|RNF40|9810|ring finger protein 40##AK293710|RNF40|9810|ring finger protein 40##BX640763|RNF40|9810|ring finger protein 40##CR627431|RNF40|9810|ring finger protein 40##AK291666|RNF40|9810|ring finger protein 40##AK131310|RNF40|9810|ring finger protein 40##AK294258|RNF40|9810|ring finger protein 40##AF122819|RNF40|9810|ring finger protein 40##AB014561|RNF40|9810|ring finger protein 40##BC006133|RNF40|9810|ring finger protein 40##BC011769|RNF40|9810|ring finger protein 40##BC018647|RNF40|9810|ring finger protein 40##AJ223980|BCL7C|9274|B-cell CLL/lymphoma 7C##BC019071|BCL7C|9274|B-cell CLL/lymphoma 7C##NM_004765|BCL7C|9274|B-cell CLL/lymphoma 7C##BC058863|BCL7C|9274|B-cell CLL/lymphoma 7C	0.990071	CTCF.p2:-13:0.990
chr8	47829394	47829549	reg1002568.p1	15.246	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	-4681866	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-4833824	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-4833838	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	344024	+	TSC_hg19_v1_chr8_+_48173521 AK303579	344048	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	344061	+	AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146	0.996384	CTCF.p2:-13:0.996
chr9	94188515	94188638	reg1001978.p2	15.246	+	TSC_hg19_v1_chr9_-_94186159 NM_005384	-2394	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	-2532	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	-64377	-	TSC_hg19_v1_chr9_-_94711095 BC033697	522552	-	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	523813	-	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	689088	-	NM_005384|NFIL3|4783|nuclear factor, interleukin 3 regulated##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1	0.108699	
chr19	12958504	12958624	reg1001940.p1	15.245	+	NM_014975 TSC_hg19_v1_chr19_+_12949305 AB023190 AK297553 AB384551	-9243	+	TSC_hg19_v1_chr19_-_12946243 BC005063 NM_031429 AK093672 AX748256	-12323	-	TSC_hg19_v1_chr19_-_12945394 AB593122	-13172	-	FJ752529 BT007047 BC010419 TSC_hg19_v1_chr19_-_12992222	33623	-	AK075449 TSC_hg19_v1_chr19_-_12992251 AF047016 AB004574 AK297493 AF045937 AK315358 BC065209 AF060222 AK311145 NM_001375	33727	-	AB463820 BC033580 BC040000 U65404 NM_006563	39422	-	NM_014975|MAST1|22983|microtubule associated serine/threonine kinase 1##AB023190|MAST1|22983|microtubule associated serine/threonine kinase 1##AK297553|MAST1|22983|microtubule associated serine/threonine kinase 1##BC005063|RTBDN|83546|retbindin##NM_031429|RTBDN|83546|retbindin##AK093672|RTBDN|83546|retbindin##AB593122|RTBDN|83546|retbindin##FJ752529|DNASE2|1777|deoxyribonuclease II, lysosomal##BT007047|DNASE2|1777|deoxyribonuclease II, lysosomal##BC010419|DNASE2|1777|deoxyribonuclease II, lysosomal##AK075449|DNASE2|1777|deoxyribonuclease II, lysosomal##AF047016|DNASE2|1777|deoxyribonuclease II, lysosomal##AB004574|DNASE2|1777|deoxyribonuclease II, lysosomal##AK297493|DNASE2|1777|deoxyribonuclease II, lysosomal##AF045937|DNASE2|1777|deoxyribonuclease II, lysosomal##AK315358|DNASE2|1777|deoxyribonuclease II, lysosomal##BC065209|DNASE2|1777|deoxyribonuclease II, lysosomal##AF060222|DNASE2|1777|deoxyribonuclease II, lysosomal##AK311145|DNASE2|1777|deoxyribonuclease II, lysosomal##NM_001375|DNASE2|1777|deoxyribonuclease II, lysosomal##BC033580|KLF1|10661|Kruppel-like factor 1 (erythroid)##BC040000|KLF1|10661|Kruppel-like factor 1 (erythroid)##U65404|KLF1|10661|Kruppel-like factor 1 (erythroid)##NM_006563|KLF1|10661|Kruppel-like factor 1 (erythroid)	0.964062	CTCF.p2:14:0.964
chr13	79998317	79998441	reg1002493.p1	15.242	+	TSC_hg19_v1_chr13_+_79980440 AK002196 BC034812	-17928	+	BC030806 TSC_hg19_v1_chr13_-_79980382	-17996	-	BX648672 BC111697 BC111739 BC041655 NM_022118 TSC_hg19_v1_chr13_-_79979967 AK302871	-18425	-	TSC_hg19_v1_chr13_+_80055257 NM_001161407 NM_019080 AB097019 AB097028 AB097029	56892	+	TSC_hg19_v1_chr13_+_80055411 AK297197 AK001723	57043	+	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	57176	+	AK002196|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)##BC034812|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)##BC030806|RBM26|64062|RNA binding motif protein 26##BX648672|RBM26|64062|RNA binding motif protein 26##BC111697|RBM26|64062|RNA binding motif protein 26##BC111739|RBM26|64062|RNA binding motif protein 26##BC041655|RBM26|64062|RNA binding motif protein 26##NM_022118|RBM26|64062|RNA binding motif protein 26##AK302871|RBM26|64062|RNA binding motif protein 26##NM_001161407|NDFIP2|54602|Nedd4 family interacting protein 2##NM_019080|NDFIP2|54602|Nedd4 family interacting protein 2##AB097019|NDFIP2|54602|Nedd4 family interacting protein 2##AB097028|NDFIP2|54602|Nedd4 family interacting protein 2##AB097029|NDFIP2|54602|Nedd4 family interacting protein 2##AK297197|NDFIP2|54602|Nedd4 family interacting protein 2##AK001723|NDFIP2|54602|Nedd4 family interacting protein 2##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2	0.972963	CTCF.p2:0:0.973
chr2	43354421	43354562	reg1001920.p1	15.241	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-334740	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-363191	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-558594	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	98854	-	TSC_hg19_v1_chr2_-_43453736 BC020369	99239	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	99251	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.999661	CTCF.p2:-15:1.000
chr11	60666955	60667084	reg1002721.p1	15.240	+	NM_207341	-32005	+	AF144308 AK291371 AK313849 TSC_hg19_v1_chr11_-_60623424 AB008535 NM_004778	-43587	-	NM_024098 TSC_hg19_v1_chr11_+_60609543 AK025974 AK302329 AK123775 BC001378 DQ892603 DQ895844 DQ501251	-57498	+	CU679057 DQ893003 DQ896249 AB527521 TSC_hg19_v1_chr11_-_60674025 AF086469	6924	-	TSC_hg19_v1_chr11_-_60674060 AJ131186 BC008719 BC018665 BC018698 NM_014502	7032	-	NM_024092 AK303961 TSC_hg19_v1_chr11_+_60681578 AK313913	14460	+	NM_207341|ZP1|22917|zona pellucida glycoprotein 1 (sperm receptor)##AF144308|PTGDR2|11251|prostaglandin D2 receptor 2##AK291371|PTGDR2|11251|prostaglandin D2 receptor 2##AK313849|PTGDR2|11251|prostaglandin D2 receptor 2##AB008535|PTGDR2|11251|prostaglandin D2 receptor 2##NM_004778|PTGDR2|11251|prostaglandin D2 receptor 2##NM_024098|CCDC86|79080|coiled-coil domain containing 86##AK025974|CCDC86|79080|coiled-coil domain containing 86##AK302329|CCDC86|79080|coiled-coil domain containing 86##AK123775|CCDC86|79080|coiled-coil domain containing 86##BC001378|CCDC86|79080|coiled-coil domain containing 86##DQ892603|CCDC86|79080|coiled-coil domain containing 86##DQ895844|CCDC86|79080|coiled-coil domain containing 86##DQ501251|CCDC86|79080|coiled-coil domain containing 86##DQ893003|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##DQ896249|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##AF086469|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##AJ131186|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC008719|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC018665|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC018698|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##NM_014502|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##NM_024092|TMEM109|79073|transmembrane protein 109##AK303961|TMEM109|79073|transmembrane protein 109##AK313913|TMEM109|79073|transmembrane protein 109	0.975416	CTCF.p2:-11:0.975
chr11	68856267	68856396	reg1003000.p1	15.240	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-39905	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-39981	+	BC016964 AK098317 TSC_hg19_v1_chr11_-_68780715 AK293469 AK075492 AK122669 AK131068 AK075450 NM_001098515 NM_145015	-75573	-	BC064339 TSC_hg19_v1_chr11_+_68857563	1195	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	205291	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	599525	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##BC016964|MRGPRF|116535|MAS-related GPR, member F##AK098317|MRGPRF|116535|MAS-related GPR, member F##AK293469|MRGPRF|116535|MAS-related GPR, member F##AK075492|MRGPRF|116535|MAS-related GPR, member F##AK122669|MRGPRF|116535|MAS-related GPR, member F##AK131068|MRGPRF|116535|MAS-related GPR, member F##AK075450|MRGPRF|116535|MAS-related GPR, member F##NM_001098515|MRGPRF|116535|MAS-related GPR, member F##NM_145015|MRGPRF|116535|MAS-related GPR, member F##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1	0.998104	CTCF.p2:12:0.998
chr12	111375014	111375141	reg1002460.p1	15.239	+	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	-16699	-	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-90274	+	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	-194321	-	BC151245 NM_015267 AB006631 AF271236	96795	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	431769	-	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	431833	-	M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A	0.999078	CTCF.p2:-17:0.999
chr12	1692753	1692886	reg1001485.p2	15.239	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-592367	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-633993	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-675737	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	10532	-	AY009399 NM_030775	33402	+	BC001749 NM_032642	45592	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.99206	CTCF.p2:12:0.992
chr21	30462436	30462583	reg1002821.p1	15.239	+	AY171599 NM_020152	-9637	+	AK308063 TSC_hg19_v1_chr21_-_30445995 AK298801 BC072001 BC005220 NM_006585	-16520	-	TSC_hg19_v1_chr21_-_30445966 BC012584 BC095470	-16552	-	TSC_hg19_v1_chr21_+_30517918 AK309998 EF219160	55401	+	TSC_hg19_v1_chr21_+_30671158 AK291021 AB002803	208655	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	208711	+	AY171599|C21orf7|56911|chromosome 21 open reading frame 7##NM_020152|C21orf7|56911|chromosome 21 open reading frame 7##AK308063|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK298801|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC072001|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC005220|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##NM_006585|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC012584|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC095470|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK309998|C21orf7|56911|chromosome 21 open reading frame 7##EF219160|C21orf7|56911|chromosome 21 open reading frame 7##AK291021|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AB002803|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	0.861529	CTCF.p2:-9:0.832
chr9	71300835	71300953	reg1001817.p2	15.238	+	DQ890797 DQ893952 BC029780 NM_153237 TSC_hg19_v1_chr9_-_71155800	-145129	-	BC033073 NM_021965	-329080	+	AY344641 AY344642 NM_199135 BC137365 BC137366 EU446685 BC103887	-383070	+	TSC_hg19_v1_chr9_+_71320206 AK295587 AK292734 NM_003558	19482	+	TSC_hg19_v1_chr9_+_71394980 NM_138333 BC013062 AK126379 AK304099	94057	+	CU680482 TSC_hg19_v1_chr9_+_71395147	94222	+	DQ890797|C9orf71|169693|chromosome 9 open reading frame 71##DQ893952|C9orf71|169693|chromosome 9 open reading frame 71##BC029780|C9orf71|169693|chromosome 9 open reading frame 71##NM_153237|C9orf71|169693|chromosome 9 open reading frame 71##BC033073|PGM5|5239|phosphoglucomutase 5##NM_021965|PGM5|5239|phosphoglucomutase 5##AY344641|FOXD4L3|286380|forkhead box D4-like 3##AY344642|FOXD4L3|286380|forkhead box D4-like 3##NM_199135|FOXD4L3|286380|forkhead box D4-like 3##BC137365|FOXD4L6|653404|forkhead box D4-like 6##BC137366|FOXD4L6|653404|forkhead box D4-like 6##EU446685|FOXD4L6|653404|forkhead box D4-like 6##BC103887|FOXD4L6|653404|forkhead box D4-like 6##AK295587|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##AK292734|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_003558|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_138333|FAM122A|116224|family with sequence similarity 122A##BC013062|FAM122A|116224|family with sequence similarity 122A##AK126379|FAM122A|116224|family with sequence similarity 122A	0.137752	
chr6	53275578	53275719	reg1002659.p1	15.236	+	AK299674 AK302948 TSC_hg19_v1_chr6_-_53213749 AF338241 NM_001242828 NM_001242830 NM_001242831 NM_021814	-61787	-	TSC_hg19_v1_chr6_-_53213736 AB209798 AL136939 BC074503 BC067123	-61927	-	AK125098 TSC_hg19_v1_chr6_-_53213676	-62009	-	TSC_hg19_v1_chr6_-_53409483 AB516284 CU691792 CU692650 EU832317 EU832402	133818	-	TSC_hg19_v1_chr6_-_53409528 BC039894 M90656	133869	-	TSC_hg19_v1_chr6_-_53409821 AB262176 BC022487	134165	-	AK299674|ELOVL5|60481|ELOVL fatty acid elongase 5##AK302948|ELOVL5|60481|ELOVL fatty acid elongase 5##AF338241|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242828|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242830|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242831|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_021814|ELOVL5|60481|ELOVL fatty acid elongase 5##AB209798|ELOVL5|60481|ELOVL fatty acid elongase 5##AL136939|ELOVL5|60481|ELOVL fatty acid elongase 5##BC074503|ELOVL5|60481|ELOVL fatty acid elongase 5##BC067123|ELOVL5|60481|ELOVL fatty acid elongase 5##AK125098|ELOVL5|60481|ELOVL fatty acid elongase 5##AB516284|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EU832317|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EU832402|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC039894|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##M90656|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AB262176|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC022487|GCLC|2729|glutamate-cysteine ligase, catalytic subunit	0.0	
chr10	119256174	119256305	reg1002676.p1	15.235	+	CU688476 TSC_hg19_v1_chr10_-_119134939 BC012186 BC028375 NM_173791 AK091746 AX747159 BC033019	-121358	-	NM_003054 BC030593 TSC_hg19_v1_chr10_+_119000626 AK314997 L23205 L09118 X71354 L14269 BC108927 BC108928	-255589	+	AB087138 AB464053 NM_181840	-299240	+	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	45677	-	AF301598 NM_001165924 NM_004098	45716	+	TSC_hg19_v1_chr10_+_119302713 AB463605	46504	+	BC012186|PDZD8|118987|PDZ domain containing 8##BC028375|PDZD8|118987|PDZ domain containing 8##NM_173791|PDZD8|118987|PDZ domain containing 8##AK091746|PDZD8|118987|PDZ domain containing 8##BC033019|PDZD8|118987|PDZ domain containing 8##NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AB087138|KCNK18|338567|potassium channel, subfamily K, member 18##NM_181840|KCNK18|338567|potassium channel, subfamily K, member 18##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AF301598|EMX2|2018|empty spiracles homeobox 2##NM_001165924|EMX2|2018|empty spiracles homeobox 2##NM_004098|EMX2|2018|empty spiracles homeobox 2	0.999332	CTCF.p2:-15:0.999
chr16	11735342	11735470	reg1002803.p1	15.235	+	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	-54617	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	-55219	-	TSC_hg19_v1_chr16_+_11439315 BC013040	-296088	+	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	26892	+	TSC_hg19_v1_chr16_-_11836686 AK297094 BX648407 AK027646 NM_015914 BC002856 BC018635	101250	-	BC046363 BC036857 TSC_hg19_v1_chr16_-_11891096 AK091803 AX747194	155645	-	BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin##AK297094|TXNDC11|51061|thioredoxin domain containing 11##BX648407|TXNDC11|51061|thioredoxin domain containing 11##AK027646|TXNDC11|51061|thioredoxin domain containing 11##NM_015914|TXNDC11|51061|thioredoxin domain containing 11##BC002856|TXNDC11|51061|thioredoxin domain containing 11##BC018635|TXNDC11|51061|thioredoxin domain containing 11##BC046363|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC036857|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK091803|ZC3H7A|29066|zinc finger CCCH-type containing 7A	0.580123	CTCF.p2:13:0.580
chr22	26170621	26170763	reg1001917.p1	15.234	+	TSC_hg19_v1_chr22_+_26138168 AY077700	-32508	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	-32572	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-209746	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	394745	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	394805	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	394971	+	AY077700|MYO18B|84700|myosin XVIIIB##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like	1.041177	CTCF.p2:-32:0.994
chr4	94631389	94631518	reg1001839.p1	15.232	+	AB209318 NM_001510 AK308611	-1405861	+	BC051694 NM_207491	-3475272	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-3582735	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	118608	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	497358	+	TSC_hg19_v1_chr4_+_95129015 NM_001128429 NM_020159 BC045534 AY008271 BC041800	497661	+	AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.176011	
chr3	156100381	156100492	reg1002140.p1	15.230	+	NM_172159 BC043166 AK127240	-91626	+	NM_003471 AK292999 L39833 U16953 U17968	-239574	+	NM_172160 L47665 AK292693 AK303287	-262085	+	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	172445	-	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	172507	-	NM_015508	291768	+	NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_003471|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292999|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L39833|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U16953|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U17968|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_172160|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L47665|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292693|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK303287|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	0.480606	CTCF.p2:0:0.481
chr3	45980389	45980505	reg1001695.p1	15.229	+	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	-52392	+	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	-96852	-	TSC_hg19_v1_chr3_-_45838112 AF125107	-142299	-	NM_006564 Y13248	4525	+	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	56874	-	AB189434 AB189435 NM_001024644 NM_005283	88531	-	NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1	0.999749	CTCF.p2:0:1.000
chr7	22599628	22599744	reg1001700.p1	15.229	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	-59839	-	AL833195 NM_012294	-203165	-	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-614204	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	167137	+	TSC_hg19_v1_chr7_+_22767104 X04403	167432	+	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	262757	-	BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	1.637847	CTCF.p2:6:0.749	CTCF.p2:-46:0.889
chr1	3641085	3641209	reg1002408.p1	15.227	+	AK310432 NM_001204192 AK302118	-26532	+	TSC_hg19_v1_chr1_+_3607235 AB055065 AB055066 AY040827 AY040828 AY040829 NM_001126240 NM_001126241 NM_001126242 NM_001204189 NM_001204190 NM_001204191 AK304177 AK304784	-33889	+	TSC_hg19_v1_chr1_+_3569108 BC117251 BC117253 NM_001204184 NM_001204185 NM_001204186 NM_001204187 NM_001204188 NM_005427 Y11416	-72021	+	TSC_hg19_v1_chr1_-_3663940 AB007964 BC035073 BC062467 BC089039	22770	-	AK057387 BC112112 NM_152492 BC112108	27816	+	TSC_hg19_v1_chr1_+_3689334 BC042129 NM_001163724	48189	+	AK310432|TP73|7161|tumor protein p73##NM_001204192|TP73|7161|tumor protein p73##AK302118|TP73|7161|tumor protein p73##AB055065|TP73|7161|tumor protein p73##AB055066|TP73|7161|tumor protein p73##AY040827|TP73|7161|tumor protein p73##AY040828|TP73|7161|tumor protein p73##AY040829|TP73|7161|tumor protein p73##NM_001126240|TP73|7161|tumor protein p73##NM_001126241|TP73|7161|tumor protein p73##NM_001126242|TP73|7161|tumor protein p73##NM_001204189|TP73|7161|tumor protein p73##NM_001204190|TP73|7161|tumor protein p73##NM_001204191|TP73|7161|tumor protein p73##AK304177|TP73|7161|tumor protein p73##AK304784|TP73|7161|tumor protein p73##BC117251|TP73|7161|tumor protein p73##BC117253|TP73|7161|tumor protein p73##NM_001204184|TP73|7161|tumor protein p73##NM_001204185|TP73|7161|tumor protein p73##NM_001204186|TP73|7161|tumor protein p73##NM_001204187|TP73|7161|tumor protein p73##NM_001204188|TP73|7161|tumor protein p73##NM_005427|TP73|7161|tumor protein p73##Y11416|TP73|7161|tumor protein p73##AB007964|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC035073|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC089039|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##AK057387|CCDC27|148870|coiled-coil domain containing 27##BC112112|CCDC27|148870|coiled-coil domain containing 27##NM_152492|CCDC27|148870|coiled-coil domain containing 27##BC112108|CCDC27|148870|coiled-coil domain containing 27##BC042129|LOC388588|388588|uncharacterized protein LOC388588##NM_001163724|LOC388588|388588|uncharacterized protein LOC388588	0.998936	CTCF.p2:9:0.999
chr4	2443488	2443637	reg1002382.p1	15.227	+	TSC_hg19_v1_chr4_+_2420681 AK126028 NM_001193282	-22865	+	TSC_hg19_v1_chr4_-_2420373 BC137309 BC137310 BC053664 AB046863 BC032605 NM_001172656 NM_001172657 NM_001172658 NM_020972 AK294710	-23158	-	BC035793 AK294874 TSC_hg19_v1_chr4_-_2366542 AK316484 NM_001172659 NM_001172660	-76996	-	TSC_hg19_v1_chr4_+_2470826 NM_001185010 NM_002938	27240	+	TSC_hg19_v1_chr4_+_2470835 AK307372	27273	+	TSC_hg19_v1_chr4_+_2470845 AB000468	27282	+	NM_001193282|LOC402160|402160|uncharacterized LOC402160##BC137309|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC137310|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC053664|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AB046863|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC032605|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172656|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172657|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172658|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_020972|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AK294710|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC035793|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AK294874|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AK316484|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172659|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172660|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001185010|RNF4|6047|ring finger protein 4##NM_002938|RNF4|6047|ring finger protein 4##AK307372|RNF4|6047|ring finger protein 4##AB000468|RNF4|6047|ring finger protein 4	1.873231	CTCF.p2:-21:0.947	CTCF.p2:74:0.926
chr21	46548651	46548776	reg1001960.p2	15.226	+	TSC_hg19_v1_chr21_+_46494502 AY082339 BC030663 NM_001112 NM_001160230 NM_015833 NM_015834 AB194369 AB194370 AB194371 AB194372 AB194373 AF525422 AF533142 AY135659 U76420 U76421 U76422 BC065545 U82120	-54130	+	TSC_hg19_v1_chr21_+_46359968 CU679303	-188744	+	TSC_hg19_v1_chr21_+_46359920 AF391113 AF391114 BC009341 NM_058190	-188788	+	TSC_hg19_v1_chr21_+_46572480 FJ169506	23785	+	TSC_hg19_v1_chr21_-_46707808 BC064623 AJ575591 AL110285 AB023175 AJ302079 AJ302080 AY066015 AK294966 AK290732 AK298080 NM_015227 NM_133635	159088	-	TSC_hg19_v1_chr21_+_46707955 BC022830 BC033767	159262	+	AY082339|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC030663|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001112|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001160230|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015833|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015834|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194369|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194370|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194371|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194372|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194373|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF525422|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF533142|ADARB1|104|adenosine deaminase, RNA-specific, B1##AY135659|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76420|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76421|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76422|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC065545|ADARB1|104|adenosine deaminase, RNA-specific, B1##U82120|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF391113|FAM207A|85395|family with sequence similarity 207, member A##AF391114|FAM207A|85395|family with sequence similarity 207, member A##BC009341|FAM207A|85395|family with sequence similarity 207, member A##NM_058190|FAM207A|85395|family with sequence similarity 207, member A##FJ169506|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC064623|POFUT2|23275|protein O-fucosyltransferase 2##AJ575591|POFUT2|23275|protein O-fucosyltransferase 2##AL110285|POFUT2|23275|protein O-fucosyltransferase 2##AB023175|POFUT2|23275|protein O-fucosyltransferase 2##AJ302079|POFUT2|23275|protein O-fucosyltransferase 2##AJ302080|POFUT2|23275|protein O-fucosyltransferase 2##AY066015|POFUT2|23275|protein O-fucosyltransferase 2##AK294966|POFUT2|23275|protein O-fucosyltransferase 2##AK290732|POFUT2|23275|protein O-fucosyltransferase 2##AK298080|POFUT2|23275|protein O-fucosyltransferase 2##NM_015227|POFUT2|23275|protein O-fucosyltransferase 2##NM_133635|POFUT2|23275|protein O-fucosyltransferase 2##BC022830|LOC642852|642852|uncharacterized LOC642852##BC033767|LOC642852|642852|uncharacterized LOC642852	1.914732	CTCF.p2:0:0.957	CTCF.p2:29:0.957
chr8	141647590	141647718	reg1002694.p1	15.225	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-2030	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-126091	+	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	-126262	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	363602	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	491083	+	AK128212 NM_001080431	591018	-	BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4	0.663543	CTCF.p2:-1:0.664
chr12	14998340	14998465	reg1001597.p1	15.224	+	AY829433 AY829434 NM_021071 AK291662 TSC_hg19_v1_chr12_-_14996461	-1978	-	BC132752 BC132754 AK092637 AX747644 NM_001013698	-31299	-	BC038836 NM_175874 AK289942 AK056213 BC015546 BC029443	-41826	+	BT006733 CR450358 DQ892495 DQ895707 X07362 AY542304 M58549 BC070314 X53331 BC005272 AK310040 AK312029 BC093078 TSC_hg19_v1_chr12_-_15038794 NM_000900 NM_001190839	40386	-	CU688844 BC030218 AY358536 NM_152321 AK056677	93059	-	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	116146	-	AY829433|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##AY829434|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##NM_021071|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##AK291662|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##BC132752|C12orf69|440087|chromosome 12 open reading frame 69##BC132754|C12orf69|440087|chromosome 12 open reading frame 69##AK092637|C12orf69|440087|chromosome 12 open reading frame 69##NM_001013698|C12orf69|440087|chromosome 12 open reading frame 69##BC038836|C12orf60|144608|chromosome 12 open reading frame 60##NM_175874|C12orf60|144608|chromosome 12 open reading frame 60##AK289942|C12orf60|144608|chromosome 12 open reading frame 60##AK056213|C12orf60|144608|chromosome 12 open reading frame 60##BC015546|C12orf60|144608|chromosome 12 open reading frame 60##BC029443|C12orf60|144608|chromosome 12 open reading frame 60##BT006733|MGP|4256|matrix Gla protein##CR450358|MGP|4256|matrix Gla protein##DQ892495|MGP|4256|matrix Gla protein##DQ895707|MGP|4256|matrix Gla protein##X07362|MGP|4256|matrix Gla protein##AY542304|MGP|4256|matrix Gla protein##M58549|MGP|4256|matrix Gla protein##BC070314|MGP|4256|matrix Gla protein##X53331|MGP|4256|matrix Gla protein##BC005272|MGP|4256|matrix Gla protein##AK312029|MGP|4256|matrix Gla protein##BC093078|MGP|4256|matrix Gla protein##NM_000900|MGP|4256|matrix Gla protein##NM_001190839|MGP|4256|matrix Gla protein##BC030218|ERP27|121506|endoplasmic reticulum protein 27##AY358536|ERP27|121506|endoplasmic reticulum protein 27##NM_152321|ERP27|121506|endoplasmic reticulum protein 27##AK056677|ERP27|121506|endoplasmic reticulum protein 27##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	0.965187	CTCF.p2:-3:0.965
chr18	22067758	22067872	reg1002031.p2	15.223	+	AF312230 BC069136 NM_001143828 NM_001160166 NM_021624 AB045370 BC112348 AB044934 AF307973 AF325356 AF329449 AJ298292 AY008280 AY136745 DQ835186 DQ835187	-27173	+	TSC_hg19_v1_chr18_+_22006671 AK312727 BC034016 AB026264 AB587563 CU689806 DQ893141 EU176771 AF208694	-61150	+	TSC_hg19_v1_chr18_+_22006608 AK292533 NM_018439 BC036074	-61208	+	TSC_hg19_v1_chr18_-_22931121 AB385259	863333	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	864222	-	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	864348	-	AF312230|HRH4|59340|histamine receptor H4##BC069136|HRH4|59340|histamine receptor H4##NM_001143828|HRH4|59340|histamine receptor H4##NM_001160166|HRH4|59340|histamine receptor H4##NM_021624|HRH4|59340|histamine receptor H4##AB045370|HRH4|59340|histamine receptor H4##BC112348|HRH4|59340|histamine receptor H4##AB044934|HRH4|59340|histamine receptor H4##AF307973|HRH4|59340|histamine receptor H4##AF325356|HRH4|59340|histamine receptor H4##AF329449|HRH4|59340|histamine receptor H4##AJ298292|HRH4|59340|histamine receptor H4##AY008280|HRH4|59340|histamine receptor H4##AY136745|HRH4|59340|histamine receptor H4##DQ835186|HRH4|59340|histamine receptor H4##DQ835187|HRH4|59340|histamine receptor H4##AK312727|IMPACT|55364|Impact homolog (mouse)##BC034016|IMPACT|55364|Impact homolog (mouse)##AB026264|IMPACT|55364|Impact homolog (mouse)##DQ893141|IMPACT|55364|Impact homolog (mouse)##EU176771|IMPACT|55364|Impact homolog (mouse)##AF208694|IMPACT|55364|Impact homolog (mouse)##AK292533|IMPACT|55364|Impact homolog (mouse)##NM_018439|IMPACT|55364|Impact homolog (mouse)##BC036074|IMPACT|55364|Impact homolog (mouse)##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521	0.994437	CTCF.p2:-7:0.994
chr18	74712527	74712651	reg1002993.p1	15.222	+	BC130034 TSC_hg19_v1_chr18_-_74692098	-20559	-	AF085243 AF085244 NM_007345	-176474	+	TSC_hg19_v1_chr18_+_74534512 BX648028	-178079	+	AK074315 TSC_hg19_v1_chr18_-_74728814	16167	-	CR536534 CR541919 TSC_hg19_v1_chr18_-_74729012 AK296492 M30515 M30516 BC008749 BC101771 BC101773 BC143348 BC143350 M30047 BC080654 M13577 AK289893 AK098402 AK128788 CR627018 AK128770 BC068550	16406	-	TSC_hg19_v1_chr18_-_74729052 AK314553 NM_001025081 NM_001025090 NM_001025092 NM_002385 AK293922	16478	-	BC130034|MBP|4155|myelin basic protein##AF085243|ZNF236|7776|zinc finger protein 236##AF085244|ZNF236|7776|zinc finger protein 236##NM_007345|ZNF236|7776|zinc finger protein 236##BX648028|ZNF236|7776|zinc finger protein 236##AK074315|MBP|4155|myelin basic protein##CR536534|MBP|4155|myelin basic protein##CR541919|MBP|4155|myelin basic protein##M30515|MBP|4155|myelin basic protein##M30516|MBP|4155|myelin basic protein##BC008749|MBP|4155|myelin basic protein##BC101771|MBP|4155|myelin basic protein##BC101773|MBP|4155|myelin basic protein##BC143348|MBP|4155|myelin basic protein##BC143350|MBP|4155|myelin basic protein##M30047|MBP|4155|myelin basic protein##BC080654|MBP|4155|myelin basic protein##M13577|MBP|4155|myelin basic protein##AK289893|MBP|4155|myelin basic protein##AK098402|MBP|4155|myelin basic protein##AK128788|MBP|4155|myelin basic protein##CR627018|MBP|4155|myelin basic protein##AK128770|MBP|4155|myelin basic protein##BC068550|MBP|4155|myelin basic protein##AK314553|MBP|4155|myelin basic protein##NM_001025081|MBP|4155|myelin basic protein##NM_001025090|MBP|4155|myelin basic protein##NM_001025092|MBP|4155|myelin basic protein##NM_002385|MBP|4155|myelin basic protein##AK293922|MBP|4155|myelin basic protein	0.31765	CTCF.p2:-3:0.318
chr19	46898938	46899057	reg1001936.p1	15.220	+	TSC_hg19_v1_chr19_+_46850348 AB527518 AK293402 AK297095 BT007275 BC000750 BC001831 X89416 U25174	-48638	+	TSC_hg19_v1_chr19_+_46850343 NM_001204284 NM_006247 BC001970 AK223222 AK312683	-48703	+	AK021881 TSC_hg19_v1_chr19_+_46844054	-54989	+	AK297668 AL136609 JN703457 NM_032040	17874	-	AL834344 TSC_hg19_v1_chr19_-_46974751 AK290218 BC051688	75725	-	TSC_hg19_v1_chr19_-_46974789 BC032508 NM_001103149 NM_018215	75808	-	AK293402|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK297095|PPP5C|5536|protein phosphatase 5, catalytic subunit##BT007275|PPP5C|5536|protein phosphatase 5, catalytic subunit##BC000750|PPP5C|5536|protein phosphatase 5, catalytic subunit##BC001831|PPP5C|5536|protein phosphatase 5, catalytic subunit##X89416|PPP5C|5536|protein phosphatase 5, catalytic subunit##U25174|PPP5C|5536|protein phosphatase 5, catalytic subunit##NM_001204284|PPP5C|5536|protein phosphatase 5, catalytic subunit##NM_006247|PPP5C|5536|protein phosphatase 5, catalytic subunit##BC001970|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK223222|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK312683|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK021881|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK297668|CCDC8|83987|coiled-coil domain containing 8##AL136609|CCDC8|83987|coiled-coil domain containing 8##JN703457|CCDC8|83987|coiled-coil domain containing 8##NM_032040|CCDC8|83987|coiled-coil domain containing 8##AL834344|PNMAL1|55228|PNMA-like 1##AK290218|PNMAL1|55228|PNMA-like 1##BC051688|PNMAL1|55228|PNMA-like 1##BC032508|PNMAL1|55228|PNMA-like 1##NM_001103149|PNMAL1|55228|PNMA-like 1##NM_018215|PNMAL1|55228|PNMA-like 1	1.236384	CTCF.p2:17:0.999
chr15	43219025	43219134	reg1001738.p2	15.219	+	AF525400 TSC_hg19_v1_chr15_-_43212975 AK131372 BC041876 NM_173500 BC071556	-6097	-	TSC_hg19_v1_chr15_-_43029327 AF525398 NM_138477	-189712	-	TSC_hg19_v1_chr15_-_43029313 BC052568 BC066640	-189859	-	AF525401 AY061886 AK292516 TSC_hg19_v1_chr15_-_43398234 AK056441 NM_174916 BC113505 BC113507 AK302489	179160	-	TSC_hg19_v1_chr15_-_43408716 D28374	189630	-	TSC_hg19_v1_chr15_+_43425795 BC009981 NM_024956	206834	+	AF525400|TTBK2|146057|tau tubulin kinase 2##AK131372|TTBK2|146057|tau tubulin kinase 2##BC041876|TTBK2|146057|tau tubulin kinase 2##NM_173500|TTBK2|146057|tau tubulin kinase 2##BC071556|TTBK2|146057|tau tubulin kinase 2##AF525398|CDAN1|146059|congenital dyserythropoietic anemia, type I##NM_138477|CDAN1|146059|congenital dyserythropoietic anemia, type I##BC052568|CDAN1|146059|congenital dyserythropoietic anemia, type I##BC066640|CDAN1|146059|congenital dyserythropoietic anemia, type I##AF525401|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##AY061886|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##AK292516|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##AK056441|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##NM_174916|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##BC113505|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##BC113507|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##AK302489|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##D28374|RPS3A|6189|ribosomal protein S3A##BC009981|TMEM62|80021|transmembrane protein 62##NM_024956|TMEM62|80021|transmembrane protein 62	0.012551	
chr4	41884909	41885038	reg1002810.p1	15.219	+	BC025350 TSC_hg19_v1_chr4_-_41884589	-394	-	TSC_hg19_v1_chr4_-_41750938 D82344 NM_003924	-134012	-	BC017199 TSC_hg19_v1_chr4_-_41750743 AK311082	-134241	-	TSC_hg19_v1_chr4_+_41937165 NM_018126 AK023062 AK001387 AK094190 AK308501 AY659966	52237	+	TSC_hg19_v1_chr4_+_41937386 BC000948 CU674470 CR457260	52461	+	NM_001029955 BC052943 BC104224 BC104225 AK122914 BC035027	98802	+	D82344|PHOX2B|8929|paired-like homeobox 2b##NM_003924|PHOX2B|8929|paired-like homeobox 2b##BC017199|PHOX2B|8929|paired-like homeobox 2b##NM_018126|TMEM33|55161|transmembrane protein 33##AK023062|TMEM33|55161|transmembrane protein 33##AK001387|TMEM33|55161|transmembrane protein 33##AK094190|TMEM33|55161|transmembrane protein 33##AK308501|TMEM33|55161|transmembrane protein 33##AY659966|TMEM33|55161|transmembrane protein 33##BC000948|TMEM33|55161|transmembrane protein 33##CR457260|TMEM33|55161|transmembrane protein 33##NM_001029955|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##BC052943|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##BC104224|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##BC104225|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##AK122914|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##BC035027|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	0.958851	CTCF.p2:0:0.959
chr4	17638545	17638667	reg1002797.p1	15.218	+	TSC_hg19_v1_chr4_+_17616263 AF318059 AK313928 AF358829 NM_025205 BC011936 AF317680 DQ893391 DQ896713 AF317679 AF317678	-22340	+	TSC_hg19_v1_chr4_+_17579121 AK298613 AK307723 AK225511 BC006199 AK298790	-59476	+	TSC_hg19_v1_chr4_+_17579057 BC065564 CR457128 AK022055	-59530	+	AK308144 NM_015688	144528	-	BC050697 TSC_hg19_v1_chr4_-_17806917	168262	-	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	173667	-	AF318059|MED28|80306|mediator complex subunit 28##AK313928|MED28|80306|mediator complex subunit 28##AF358829|MED28|80306|mediator complex subunit 28##NM_025205|MED28|80306|mediator complex subunit 28##BC011936|MED28|80306|mediator complex subunit 28##AF317680|MED28|80306|mediator complex subunit 28##DQ893391|MED28|80306|mediator complex subunit 28##DQ896713|MED28|80306|mediator complex subunit 28##AF317679|MED28|80306|mediator complex subunit 28##AF317678|MED28|80306|mediator complex subunit 28##AK298613|LAP3|51056|leucine aminopeptidase 3##AK307723|LAP3|51056|leucine aminopeptidase 3##AK225511|LAP3|51056|leucine aminopeptidase 3##BC006199|LAP3|51056|leucine aminopeptidase 3##AK298790|LAP3|51056|leucine aminopeptidase 3##BC065564|LAP3|51056|leucine aminopeptidase 3##CR457128|LAP3|51056|leucine aminopeptidase 3##AK022055|LAP3|51056|leucine aminopeptidase 3##AK308144|FAM184B|27146|family with sequence similarity 184, member B##NM_015688|FAM184B|27146|family with sequence similarity 184, member B##BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16	0.999682	CTCF.p2:1:1.000
chr6	139540465	139540598	reg1002417.p1	15.218	+	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	-84275	+	TSC_hg19_v1_chr6_+_139349935 AK309402 AF116682 BC014953	-190613	+	NM_021243 AF161398 TSC_hg19_v1_chr6_+_139349850	-190694	+	TSC_hg19_v1_chr6_-_139613136 BX647633 AL834248 AL831988 AK314725 BX647477 BC115383 BC115384 AB085905 NM_153235	72629	-	NM_001168389 NM_001168388	154892	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	155230	-	BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)##AF116682|C6orf115|58527|chromosome 6 open reading frame 115##BC014953|C6orf115|58527|chromosome 6 open reading frame 115##NM_021243|C6orf115|58527|chromosome 6 open reading frame 115##AF161398|C6orf115|58527|chromosome 6 open reading frame 115##BX647633|TXLNB|167838|taxilin beta##AL834248|TXLNB|167838|taxilin beta##AL831988|TXLNB|167838|taxilin beta##AK314725|TXLNB|167838|taxilin beta##BX647477|TXLNB|167838|taxilin beta##BC115383|TXLNB|167838|taxilin beta##BC115384|TXLNB|167838|taxilin beta##AB085905|TXLNB|167838|taxilin beta##NM_153235|TXLNB|167838|taxilin beta##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	0.898065	CTCF.p2:-15:0.898
chr8	42948528	42948645	reg1001771.p1	15.218	+	TSC_hg19_v1_chr8_+_42911465 NM_002027 BC037295 AK292121 L00634 BC084566 L10413 AB590505 BT009854 BC017029	-37118	+	TSC_hg19_v1_chr8_+_42752142 BC056146	-196440	+	TSC_hg19_v1_chr8_+_42752090 AK309224	-196498	+	TSC_hg19_v1_chr8_+_42948657 NM_032237	67	+	AK027009 TSC_hg19_v1_chr8_+_42948660	81	+	TSC_hg19_v1_chr8_+_42995606 NM_152419	46994	+	NM_002027|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC037295|FNTA|2339|farnesyltransferase, CAAX box, alpha##AK292121|FNTA|2339|farnesyltransferase, CAAX box, alpha##L00634|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC084566|FNTA|2339|farnesyltransferase, CAAX box, alpha##L10413|FNTA|2339|farnesyltransferase, CAAX box, alpha##BT009854|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC017029|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC056146|HOOK3|84376|hook homolog 3 (Drosophila)##AK309224|HOOK3|84376|hook homolog 3 (Drosophila)##NM_032237|SGK196|84197|protein kinase-like protein SgK196##NM_152419|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase	0.957977	CTCF.p2:6:0.958
chr2	102637206	102637343	reg1002223.p1	15.217	+	BC027733 BC012346 NM_173343	-21817	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	-28911	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	-128742	+	TSC_hg19_v1_chr2_+_102759205 X16896	121958	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	133146	+	AF284434 NM_003854 U49065 BC107064	166174	+	BC027733|IL1R2|7850|interleukin 1 receptor, type II##BC012346|IL1R2|7850|interleukin 1 receptor, type II##NM_173343|IL1R2|7850|interleukin 1 receptor, type II##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##X16896|IL1R1|3554|interleukin 1 receptor, type I##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2	0.995119	CTCF.p2:-17:0.995
chr4	110343671	110343804	reg1003052.p1	15.216	+	AF293340 AF293341 NM_032518 NM_198721 TSC_hg19_v1_chr4_-_110223816	-119930	-	AK091888 AX747236 AK294072 AJ298293 AK294235 BC022526 NM_001146590 NM_001146627 NM_031279	-659594	-	AF068297 TSC_hg19_v1_chr4_+_109571786 AK312185 DQ893222 DQ896551 AF343342	-771942	+	TSC_hg19_v1_chr4_+_110354836 AJ131245	11110	+	TSC_hg19_v1_chr4_-_110354918 BC009800	11206	-	BC117135 BC143268 BC143269 BC143276 TSC_hg19_v1_chr4_+_110354970 NM_001042734 NM_006323	11211	+	AF293340|COL25A1|84570|collagen, type XXV, alpha 1##AF293341|COL25A1|84570|collagen, type XXV, alpha 1##NM_032518|COL25A1|84570|collagen, type XXV, alpha 1##NM_198721|COL25A1|84570|collagen, type XXV, alpha 1##AK091888|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294072|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AJ298293|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294235|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##BC022526|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146590|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146627|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_031279|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AF068297|OSTC|58505|oligosaccharyltransferase complex subunit##AK312185|OSTC|58505|oligosaccharyltransferase complex subunit##DQ893222|OSTC|58505|oligosaccharyltransferase complex subunit##DQ896551|OSTC|58505|oligosaccharyltransferase complex subunit##AF343342|OSTC|58505|oligosaccharyltransferase complex subunit##AJ131245|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC009800|1/2-SBSRNA4|100533182|lncRNA_BC009800##BC117135|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143268|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143269|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143276|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_001042734|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_006323|SEC24B|10427|SEC24 family, member B (S. cerevisiae)	0.999513	CTCF.p2:1:1.000
chr6	131206634	131206748	reg1001832.p1	15.216	+	BC113027 NM_001195597 AK091900 AX747243 BC101422 BC101423 BC101424 BC101425 BC113026 TSC_hg19_v1_chr6_+_131148577	-58129	+	AB052099 NM_052913	-448430	+	AK091882 AX747235 NM_001017373	-662593	-	TSC_hg19_v1_chr6_-_131291480 AK307764 NM_001199389	84860	-	CR749262 CR936793 NM_001252660	115196	-	AF027299 TSC_hg19_v1_chr6_-_131384381 BC034718 AB209522	177660	-	BC113027|LOC100507203|100507203|uncharacterized LOC100507203##NM_001195597|LOC100507203|100507203|uncharacterized LOC100507203##AK091900|LOC100507203|100507203|uncharacterized LOC100507203##BC101422|LOC100507203|100507203|uncharacterized LOC100507203##BC101423|LOC100507203|100507203|uncharacterized LOC100507203##BC101424|LOC100507203|100507203|uncharacterized LOC100507203##BC101425|LOC100507203|100507203|uncharacterized LOC100507203##BC113026|LOC100507203|100507203|uncharacterized LOC100507203##AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A##AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AF027299|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##BC034718|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AB209522|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	0.689302	CTCF.p2:-4:0.689
chr11	124539157	124539285	reg1002927.p1	15.214	+	BC018452 TSC_hg19_v1_chr11_+_124492787 BC064392 BC032312 BC073160 BC109269 DQ144542	-46345	+	AK027527 AK057749 TSC_hg19_v1_chr11_+_124492770	-46451	+	TSC_hg19_v1_chr11_+_124492765 AK222936	-46458	+	AL137496 EU831959 CU691938 TSC_hg19_v1_chr11_-_124543619 AF303378 BC022456 AK056093 BC040966 BC068450 NM_170601	4466	-	AF334735 NM_017425 AK311806 AK307271 BC019224	4554	+	AF300796 NM_001199922	6977	-	BC018452|TBRG1|84897|transforming growth factor beta regulator 1##BC064392|TBRG1|84897|transforming growth factor beta regulator 1##BC032312|TBRG1|84897|transforming growth factor beta regulator 1##BC073160|TBRG1|84897|transforming growth factor beta regulator 1##BC109269|TBRG1|84897|transforming growth factor beta regulator 1##DQ144542|TBRG1|84897|transforming growth factor beta regulator 1##AK027527|TBRG1|84897|transforming growth factor beta regulator 1##AK057749|TBRG1|84897|transforming growth factor beta regulator 1##AK222936|TBRG1|84897|transforming growth factor beta regulator 1##AL137496|SIAE|54414|sialic acid acetylesterase##EU831959|SIAE|54414|sialic acid acetylesterase##AF303378|SIAE|54414|sialic acid acetylesterase##BC022456|SIAE|54414|sialic acid acetylesterase##AK056093|SIAE|54414|sialic acid acetylesterase##BC040966|SIAE|54414|sialic acid acetylesterase##BC068450|SIAE|54414|sialic acid acetylesterase##NM_170601|SIAE|54414|sialic acid acetylesterase##AF334735|SPA17|53340|sperm autoantigenic protein 17##NM_017425|SPA17|53340|sperm autoantigenic protein 17##AK311806|SPA17|53340|sperm autoantigenic protein 17##AK307271|SPA17|53340|sperm autoantigenic protein 17##BC019224|SPA17|53340|sperm autoantigenic protein 17##AF300796|SIAE|54414|sialic acid acetylesterase##NM_001199922|SIAE|54414|sialic acid acetylesterase	0.986656	CTCF.p2:-10:0.987
chr6	14144964	14145095	reg1002953.p1	15.214	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-27007	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-27124	+	NM_001251901	-27543	+	TSC_hg19_v1_chr6_+_15245702 AK302624	1100688	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	1101383	+	BC033996 TSC_hg19_v1_chr6_-_15248900	1103872	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.999251	CTCF.p2:4:0.999
chr17	3641107	3641242	reg1002754.p1	15.213	+	TSC_hg19_v1_chr17_+_3627210 AK310546 AK315247 BC036181 NM_031965 AK056691 AB039834 AF289865 BC050662 AK292715 BC016626 BC047457	-13958	+	TSC_hg19_v1_chr17_-_3627077 AF289864	-14072	-	AB209623 BC016917 AK307959 TSC_hg19_v1_chr17_-_3599535 BC008319 AK290889 NM_001204519 NM_001204520 NM_002561 NM_175080	-41582	-	HQ258689 TSC_hg19_v1_chr17_-_3704463	63279	-	TSC_hg19_v1_chr17_-_3704490 BC113436 BC117207 NM_002208	63337	-	TSC_hg19_v1_chr17_-_3749541 NM_001114118 NM_018553	108336	-	BC036181|GSG2|83903|germ cell associated 2 (haspin)##NM_031965|GSG2|83903|germ cell associated 2 (haspin)##AK056691|GSG2|83903|germ cell associated 2 (haspin)##AB039834|GSG2|83903|germ cell associated 2 (haspin)##AF289865|GSG2|83903|germ cell associated 2 (haspin)##BC050662|GSG2|83903|germ cell associated 2 (haspin)##AK292715|GSG2|83903|germ cell associated 2 (haspin)##BC016626|GSG2|83903|germ cell associated 2 (haspin)##BC047457|GSG2|83903|germ cell associated 2 (haspin)##AF289864|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##AB209623|P2RX5-TAX1BP3|100533970|P2RX5-TAX1BP3 readthrough##BC016917|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK307959|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC008319|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK290889|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204519|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204520|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_002561|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_175080|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##HQ258689|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC113436|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC117207|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_002208|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_001114118|C17orf85|55421|chromosome 17 open reading frame 85##NM_018553|C17orf85|55421|chromosome 17 open reading frame 85	0.945833	CTCF.p2:-8:0.946
chr2	170384854	170384986	reg1002541.p1	15.213	+	AF333387 NM_006063 TSC_hg19_v1_chr2_+_170366211 AK316571 BC006534 AF056929 DQ896002 EU176397	-18671	+	TSC_hg19_v1_chr2_+_170335996 AK302851 AY604003 AY604004 NM_152384 BC044593 AL834305 AK312680 AM393220 AB528077 CU692220	-48915	+	U33837 TSC_hg19_v1_chr2_-_170219045 AK295005 NM_004525	-165841	-	AL832058 AK074302 BC017950 AK055892 AK130797 BC035241 NM_024622	45447	-	TSC_hg19_v1_chr2_+_170440887 BC109373 NM_004792 AK307552 BC111693 BC001555 X99717	55965	+	TSC_hg19_v1_chr2_+_170441111 BC063711	56209	+	AF333387|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##NM_006063|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##AK316571|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##BC006534|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##AF056929|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##DQ896002|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##EU176397|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##AY604003|BBS5|129880|Bardet-Biedl syndrome 5##AY604004|BBS5|129880|Bardet-Biedl syndrome 5##NM_152384|BBS5|129880|Bardet-Biedl syndrome 5##BC044593|BBS5|129880|Bardet-Biedl syndrome 5##AL834305|BBS5|129880|Bardet-Biedl syndrome 5##AK312680|BBS5|129880|Bardet-Biedl syndrome 5##AM393220|BBS5|129880|Bardet-Biedl syndrome 5##U33837|LRP2|4036|low density lipoprotein receptor-related protein 2##AK295005|LRP2|4036|low density lipoprotein receptor-related protein 2##NM_004525|LRP2|4036|low density lipoprotein receptor-related protein 2##AL832058|FASTKD1|79675|FAST kinase domains 1##AK074302|FASTKD1|79675|FAST kinase domains 1##BC017950|FASTKD1|79675|FAST kinase domains 1##AK055892|FASTKD1|79675|FAST kinase domains 1##AK130797|FASTKD1|79675|FAST kinase domains 1##BC035241|FASTKD1|79675|FAST kinase domains 1##NM_024622|FASTKD1|79675|FAST kinase domains 1##BC109373|PPIG|9360|peptidylprolyl isomerase G (cyclophilin G)##NM_004792|PPIG|9360|peptidylprolyl isomerase G (cyclophilin G)##AK307552|PPIG|9360|peptidylprolyl isomerase G (cyclophilin G)##BC111693|PPIG|9360|peptidylprolyl isomerase G (cyclophilin G)##BC001555|PPIG|9360|peptidylprolyl isomerase G (cyclophilin G)##X99717|PPIG|9360|peptidylprolyl isomerase G (cyclophilin G)##BC063711|PPIG|9360|peptidylprolyl isomerase G (cyclophilin G)	0.974556	CTCF.p2:7:0.944
chr7	105817253	105817364	reg1001682.p1	15.213	+	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	-64293	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	-64564	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	-64627	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	108054	-	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	108215	-	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	484195	-	EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##X61382|SYPL1|6856|synaptophysin-like 1##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74	0.245054	CTCF.p2:-6:0.245
chr12	9483886	9484007	reg1001172.p1	15.212	+	TSC_hg19_v1_chr12_+_9436619 AK123583 AK309820	-47321	+	BC111756 AK313639 NM_002864 X54380	-122984	-	TSC_hg19_v1_chr12_-_9268536 NM_000014	-215388	-	TSC_hg19_v1_chr12_-_9600810 BC035635 BC128040 BC111733	116852	-	BC027885 BC113997 BC114516 U11276 NM_002258 AK292022	276550	-	TSC_hg19_v1_chr12_+_9800760 AK096274	316950	+	AK309820|LOC642846|642846|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like##BC111756|PZP|5858|pregnancy-zone protein##AK313639|PZP|5858|pregnancy-zone protein##NM_002864|PZP|5858|pregnancy-zone protein##X54380|PZP|5858|pregnancy-zone protein##NM_000014|A2M|2|alpha-2-macroglobulin##BC035635|DDX12P|440081|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12, pseudogene##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK096274|LOC374443|374443|CLR pseudogene	0.998981	CTCF.p2:-24:0.999
chr13	50243993	50244118	reg1002456.p1	15.212	+	AF441378 NM_138450	-41621	+	TSC_hg19_v1_chr13_-_50159706 BC038104 AK096654 NM_018191	-84331	-	AL833821 TSC_hg19_v1_chr13_-_50159688 AJ319660 AF334406	-84390	-	TSC_hg19_v1_chr13_-_50265590 DQ891521 DQ894711 BC018478	21466	-	TSC_hg19_v1_chr13_-_50265611 BC021021 AF243433 BC092471 BC073152 NM_032565	21574	-	TSC_hg19_v1_chr13_-_50366675 AF034756 DQ892644 DQ895882 AB528414 AF005263 Y12394 BC017355 BC024202 AK291000 AK223480	122562	-	AF441378|ARL11|115761|ADP-ribosylation factor-like 11##NM_138450|ARL11|115761|ADP-ribosylation factor-like 11##BC038104|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AK096654|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##NM_018191|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AL833821|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AJ319660|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AF334406|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##DQ891521|EBPL|84650|emopamil binding protein-like##DQ894711|EBPL|84650|emopamil binding protein-like##BC018478|EBPL|84650|emopamil binding protein-like##BC021021|EBPL|84650|emopamil binding protein-like##AF243433|EBPL|84650|emopamil binding protein-like##BC092471|EBPL|84650|emopamil binding protein-like##BC073152|EBPL|84650|emopamil binding protein-like##NM_032565|EBPL|84650|emopamil binding protein-like##AF034756|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##DQ892644|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##DQ895882|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AF005263|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##Y12394|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC017355|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC024202|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK291000|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK223480|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)	0.878935	CTCF.p2:-22:0.879
chr19	48610713	48610826	reg1001710.p1	15.212	+	HQ258076 BC126133 BC126135 AF169159 NM_019855	-63524	-	AF279147 NM_022142 BC015598	-112844	+	AB590993 DQ227497 NM_001128326	-115387	-	AF058921 BC017956 AK022440 TSC_hg19_v1_chr19_-_48614075 AF065214 BC063416 AK314524 AK295400 NM_001159322 NM_001159323 NM_003706	3291	-	M36067 NM_000234 TSC_hg19_v1_chr19_-_48673602 AK314210 AK297296 AK303644 AB208791 AK225863 AK300370	62812	-	TSC_hg19_v1_chr19_+_48673949 BC043386	63184	+	HQ258076|CABP5|56344|calcium binding protein 5##BC126133|CABP5|56344|calcium binding protein 5##BC126135|CABP5|56344|calcium binding protein 5##AF169159|CABP5|56344|calcium binding protein 5##NM_019855|CABP5|56344|calcium binding protein 5##AF279147|ELSPBP1|64100|epididymal sperm binding protein 1##NM_022142|ELSPBP1|64100|epididymal sperm binding protein 1##BC015598|ELSPBP1|64100|epididymal sperm binding protein 1##DQ227497|BSPH1|100131137|binder of sperm protein homolog 1##NM_001128326|BSPH1|100131137|binder of sperm protein homolog 1##AF058921|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC017956|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK022440|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AF065214|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC063416|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK314524|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK295400|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159322|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159323|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_003706|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##M36067|LIG1|3978|ligase I, DNA, ATP-dependent##NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent##AK314210|LIG1|3978|ligase I, DNA, ATP-dependent##AK297296|LIG1|3978|ligase I, DNA, ATP-dependent##AK303644|LIG1|3978|ligase I, DNA, ATP-dependent##AB208791|LIG1|3978|ligase I, DNA, ATP-dependent##AK225863|LIG1|3978|ligase I, DNA, ATP-dependent##AK300370|LIG1|3978|ligase I, DNA, ATP-dependent##BC043386|C19orf68|374920|chromosome 19 open reading frame 68	0.420191	CTCF.p2:-8:0.420
chr10	134036729	134036845	reg1001604.p1	15.207	+	TSC_hg19_v1_chr10_+_134000451 AB006713 NM_006426 BC142974 BC029280 Y10976 BC136329 BC136330	-36348	+	NM_001105521	-118475	+	TSC_hg19_v1_chr10_-_133795461 BC067818	-241318	-	TSC_hg19_v1_chr10_-_134121455 AY098866 NM_173575	84662	-	AK302102 TSC_hg19_v1_chr10_-_134145327	108541	-	TSC_hg19_v1_chr10_-_134145360 AK098366 AK308956 BC042566	108559	-	AB006713|DPYSL4|10570|dihydropyrimidinase-like 4##NM_006426|DPYSL4|10570|dihydropyrimidinase-like 4##BC142974|DPYSL4|10570|dihydropyrimidinase-like 4##BC029280|DPYSL4|10570|dihydropyrimidinase-like 4##Y10976|DPYSL4|10570|dihydropyrimidinase-like 4##BC136329|DPYSL4|10570|dihydropyrimidinase-like 4##BC136330|DPYSL4|10570|dihydropyrimidinase-like 4##NM_001105521|JAKMIP3|282973|Janus kinase and microtubule interacting protein 3##BC067818|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AY098866|STK32C|282974|serine/threonine kinase 32C##NM_173575|STK32C|282974|serine/threonine kinase 32C##AK302102|STK32C|282974|serine/threonine kinase 32C##AK098366|STK32C|282974|serine/threonine kinase 32C##AK308956|STK32C|282974|serine/threonine kinase 32C	1.084836	CTCF.p2:1:0.995
chr17	7227639	7227751	reg1001853.p1	15.207	+	TSC_hg19_v1_chr17_-_7218697 AK301877 U28963 BC107738 BC103901 BC103902 BC103903	-8922	-	BT006998 CR541723 CR541750 TSC_hg19_v1_chr17_-_7218639 BC014192 BC013652 NM_004489	-9178	-	NM_001143762 AF376057 AY129322	-15988	+	TSC_hg19_v1_chr17_-_7232655 AL136870 AB058690 NM_001005408 NM_032442 AL833570	4992	-	NM_014716 TSC_hg19_v1_chr17_+_7239850 D30758 BC018543	12164	+	BC103744 NM_001002914	27512	+	AK301877|GPS2|2874|G protein pathway suppressor 2##U28963|GPS2|2874|G protein pathway suppressor 2##BC107738|GPS2|2874|G protein pathway suppressor 2##BC103901|GPS2|2874|G protein pathway suppressor 2##BC103902|GPS2|2874|G protein pathway suppressor 2##BC103903|GPS2|2874|G protein pathway suppressor 2##BT006998|GPS2|2874|G protein pathway suppressor 2##CR541723|GPS2|2874|G protein pathway suppressor 2##CR541750|GPS2|2874|G protein pathway suppressor 2##BC014192|GPS2|2874|G protein pathway suppressor 2##BC013652|GPS2|2874|G protein pathway suppressor 2##NM_004489|GPS2|2874|G protein pathway suppressor 2##NM_001143762|EIF5A|1984|eukaryotic translation initiation factor 5A##AF376057|EIF5A|1984|eukaryotic translation initiation factor 5A##AY129322|EIF5A|1984|eukaryotic translation initiation factor 5A##AL136870|NEURL4|84461|neuralized homolog 4 (Drosophila)##AB058690|NEURL4|84461|neuralized homolog 4 (Drosophila)##NM_001005408|NEURL4|84461|neuralized homolog 4 (Drosophila)##NM_032442|NEURL4|84461|neuralized homolog 4 (Drosophila)##AL833570|NEURL4|84461|neuralized homolog 4 (Drosophila)##NM_014716|ACAP1|9744|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1##D30758|ACAP1|9744|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1##BC018543|ACAP1|9744|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1##BC103744|KCTD11|147040|potassium channel tetramerisation domain containing 11##NM_001002914|KCTD11|147040|potassium channel tetramerisation domain containing 11	0.38012	CTCF.p2:-3:0.364
chr7	135485952	135486087	reg1002534.p1	15.207	+	BC137311 BC137312 AK297754 AY358803 AK290250 AK310180 NM_205855	-52540	-	AF169301 NM_012450 BC030689 TSC_hg19_v1_chr7_-_135412940 AB208809	-73083	-	TSC_hg19_v1_chr7_+_135347230 NM_001130929 BC063529 BC073942 BC021734 BC107765 BC047474 BC016741 BC040872	-138758	+	AF130088 TSC_hg19_v1_chr7_-_135613232	127201	-	AB489167 AM393216 AM393266 TSC_hg19_v1_chr7_-_135661945	175877	-	TSC_hg19_v1_chr7_-_135662107 AF106075 AL834231 BC028093 AK309816 AK056225	176071	-	BC137311|FAM180A|389558|family with sequence similarity 180, member A##BC137312|FAM180A|389558|family with sequence similarity 180, member A##AK297754|FAM180A|389558|family with sequence similarity 180, member A##AY358803|FAM180A|389558|family with sequence similarity 180, member A##AK290250|FAM180A|389558|family with sequence similarity 180, member A##AK310180|FAM180A|389558|family with sequence similarity 180, member A##NM_205855|FAM180A|389558|family with sequence similarity 180, member A##AF169301|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##NM_012450|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##BC030689|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##AB208809|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##NM_001130929|C7orf73|647087|chromosome 7 open reading frame 73##BC063529|C7orf73|647087|chromosome 7 open reading frame 73##BC073942|C7orf73|647087|chromosome 7 open reading frame 73##BC021734|C7orf73|647087|chromosome 7 open reading frame 73##BC107765|C7orf73|647087|chromosome 7 open reading frame 73##BC047474|C7orf73|647087|chromosome 7 open reading frame 73##BC016741|C7orf73|647087|chromosome 7 open reading frame 73##BC040872|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##AF130088|LUZP6|767558|leucine zipper protein 6##AM393216|MTPN|136319|myotrophin##AM393266|MTPN|136319|myotrophin##AF106075|MTPN|136319|myotrophin##AL834231|MTPN|136319|myotrophin##BC028093|MTPN|136319|myotrophin##AK309816|MTPN|136319|myotrophin##AK056225|MTPN|136319|myotrophin	0.972107	CTCF.p2:-11:0.972
chr5	132447042	132447174	reg1002122.p1	15.205	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-14217	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-18705	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-41005	+	TSC_hg19_v1_chr5_-_132948202 AK055684	501091	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	501130	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	857267	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.984161	CTCF.p2:-21:0.984
chr6	166519689	166519823	reg1002193.p1	15.203	+	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	-118222	-	TSC_hg19_v1_chr6_-_166401424 AK289375	-118323	-	AY203946 TSC_hg19_v1_chr6_-_166076051	-443704	-	BC098425 NM_003181	62373	-	BC034775 NM_175922 TSC_hg19_v1_chr6_-_166721880	202120	-	BC018969 NM_145169 TSC_hg19_v1_chr6_-_166756020	236251	-	BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##AK289375|LINC00473|90632|long intergenic non-protein coding RNA 473##AY203946|LOC100132188|100132188|LP7097##BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)##BC034775|PRR18|285800|proline rich 18##NM_175922|PRR18|285800|proline rich 18##BC018969|SFT2D1|113402|SFT2 domain containing 1##NM_145169|SFT2D1|113402|SFT2 domain containing 1	0.113733	
chr19	13700163	13700292	reg1003139.p1	15.201	+	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	-83051	-	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-436047	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-438935	+	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	142352	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	158492	+	TSC_hg19_v1_chr19_+_13875323 NM_001031727 NM_032285	175093	+	AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130##NM_001031727|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)##NM_032285|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	0.999942	CTCF.p2:2:1.000
chr6	71079179	71079293	reg1001798.p1	15.200	+	X54412 BC015409 TSC_hg19_v1_chr6_-_71012827 NM_001851	-66436	-	X54413 BC008620 BC063646 NM_078485	-86404	-	AK309023 TSC_hg19_v1_chr6_+_70577418	-501874	+	TSC_hg19_v1_chr6_+_71123122 NM_001105531 NM_020819	43877	+	TSC_hg19_v1_chr6_+_71123224 CR749254 BC131782	43978	+	NM_001162529 AB037832	56921	+	X54412|COL9A1|1297|collagen, type IX, alpha 1##BC015409|COL9A1|1297|collagen, type IX, alpha 1##NM_001851|COL9A1|1297|collagen, type IX, alpha 1##X54413|COL9A1|1297|collagen, type IX, alpha 1##BC008620|COL9A1|1297|collagen, type IX, alpha 1##BC063646|COL9A1|1297|collagen, type IX, alpha 1##NM_078485|COL9A1|1297|collagen, type IX, alpha 1##NM_001105531|FAM135A|57579|family with sequence similarity 135, member A##NM_020819|FAM135A|57579|family with sequence similarity 135, member A##CR749254|FAM135A|57579|family with sequence similarity 135, member A##BC131782|FAM135A|57579|family with sequence similarity 135, member A##NM_001162529|FAM135A|57579|family with sequence similarity 135, member A##AB037832|FAM135A|57579|family with sequence similarity 135, member A	1.024292	CTCF.p2:0:0.952
chr10	102855491	102855619	reg1002752.p1	15.199	+	TSC_hg19_v1_chr10_+_102821745 BC007758 AY359087 AK225949 AK172862	-33896	+	TSC_hg19_v1_chr10_+_102820998 AK172864 NM_030929	-34577	+	TSC_hg19_v1_chr10_+_102792167 AK299405 BC000124	-63366	+	BC019674 NM_001085398	35347	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	35623	+	BC136321 BC069156 NM_006562 X90828	133147	-	BC007758|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AY359087|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK225949|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172862|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172864|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##NM_030929|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK299405|SFXN3|81855|sideroflexin 3##BC000124|SFXN3|81855|sideroflexin 3##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1	1.335753	CTCF.p2:-2:1.000	CTCF.p2:92:0.336
chr16	75798186	75798305	reg1002251.p1	15.197	+	AK307901 NM_018975 TSC_hg19_v1_chr16_+_75681715 AK000669 BC022428 BC004465 BC005841 BC016739 BC078171 AF289599 AF250393 AB464292 CU678732 AF262988	-116538	+	BC013246 CU678582 DQ892301 DQ895500 TSC_hg19_v1_chr16_-_75681564 BC004132 D31890 AF285758 AK126584 D32053 AK315687 NM_001130089 NM_005548	-116684	-	AK001687 AK314652 TSC_hg19_v1_chr16_-_75657163 BC002758 AK296834 NM_012091	-141059	-	AB051550 NM_033401 TSC_hg19_v1_chr16_+_76311298	512995	+	NM_138994 AK057327 BC017266	545510	+	TSC_hg19_v1_chr16_+_77224857 BC024277 NM_014940	1426597	+	AK307901|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##NM_018975|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AK000669|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC022428|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC004465|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC005841|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC016739|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC078171|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF289599|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF250393|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF262988|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC013246|KARS|3735|lysyl-tRNA synthetase##DQ892301|KARS|3735|lysyl-tRNA synthetase##DQ895500|KARS|3735|lysyl-tRNA synthetase##BC004132|KARS|3735|lysyl-tRNA synthetase##D31890|KARS|3735|lysyl-tRNA synthetase##AF285758|KARS|3735|lysyl-tRNA synthetase##AK126584|KARS|3735|lysyl-tRNA synthetase##D32053|KARS|3735|lysyl-tRNA synthetase##AK315687|KARS|3735|lysyl-tRNA synthetase##NM_001130089|KARS|3735|lysyl-tRNA synthetase##NM_005548|KARS|3735|lysyl-tRNA synthetase##AK001687|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AK314652|ADAT1|23536|adenosine deaminase, tRNA-specific 1##BC002758|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AK296834|ADAT1|23536|adenosine deaminase, tRNA-specific 1##NM_012091|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AB051550|CNTNAP4|85445|contactin associated protein-like 4##NM_033401|CNTNAP4|85445|contactin associated protein-like 4##NM_138994|CNTNAP4|85445|contactin associated protein-like 4##AK057327|CNTNAP4|85445|contactin associated protein-like 4##BC017266|CNTNAP4|85445|contactin associated protein-like 4##BC024277|MON1B|22879|MON1 homolog B (yeast)##NM_014940|MON1B|22879|MON1 homolog B (yeast)	0.525376	CTCF.p2:19:0.525
chr11	5497579	5497699	reg1002570.p1	15.196	+	BC140730 NM_001004754	-23002	+	BC151148 NM_001005288	-34857	-	BC136999 NM_001004757	-54299	+	BC136928 BC136930 NM_001005163	12275	+	BC015537 BC022184 NM_001005567	29218	-	AF230481 NM_017481 AK225738 BC036743	33520	-	BC140730|OR51I2|390064|olfactory receptor, family 51, subfamily I, member 2##NM_001004754|OR51I2|390064|olfactory receptor, family 51, subfamily I, member 2##BC151148|OR51I1|390063|olfactory receptor, family 51, subfamily I, member 1##NM_001005288|OR51I1|390063|olfactory receptor, family 51, subfamily I, member 1##BC136999|OR51Q1|390061|olfactory receptor, family 51, subfamily Q, member 1##NM_001004757|OR51Q1|390061|olfactory receptor, family 51, subfamily Q, member 1##BC136928|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1##BC136930|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1##NM_001005163|OR52D1|390066|olfactory receptor, family 52, subfamily D, member 1##BC015537|HBE1|3046|hemoglobin, epsilon 1##BC022184|OR51B5|282763|olfactory receptor, family 51, subfamily B, member 5##NM_001005567|OR51B5|282763|olfactory receptor, family 51, subfamily B, member 5##AF230481|UBQLN3|50613|ubiquilin 3##NM_017481|UBQLN3|50613|ubiquilin 3##BC036743|UBQLN3|50613|ubiquilin 3	0.99975	CTCF.p2:1:1.000
chr12	104503073	104503199	reg1002613.p1	15.196	+	NM_013320 TSC_hg19_v1_chr12_+_104458317 AK313466 AK223342 BC006558 AF117210 BC033799 EU446491	-44850	+	BC022343 NM_031302 TSC_hg19_v1_chr12_-_104443943	-59207	-	AY358763 AK027310 TSC_hg19_v1_chr12_-_104443809	-59382	-	TSC_hg19_v1_chr12_-_104531875 X59710 BC007035 AK291934 BC005316 BC005317 AK311706 NM_006166	28821	-	TSC_hg19_v1_chr12_+_104609556 NM_001093771 AK304241 AY057105	106404	+	TSC_hg19_v1_chr12_+_104659047 D28393	155912	+	NM_013320|HCFC2|29915|host cell factor C2##AK313466|HCFC2|29915|host cell factor C2##AK223342|HCFC2|29915|host cell factor C2##BC006558|HCFC2|29915|host cell factor C2##AF117210|HCFC2|29915|host cell factor C2##BC033799|HCFC2|29915|host cell factor C2##EU446491|HCFC2|29915|host cell factor C2##BC022343|GLT8D2|83468|glycosyltransferase 8 domain containing 2##NM_031302|GLT8D2|83468|glycosyltransferase 8 domain containing 2##AY358763|GLT8D2|83468|glycosyltransferase 8 domain containing 2##AK027310|GLT8D2|83468|glycosyltransferase 8 domain containing 2##X59710|NFYB|4801|nuclear transcription factor Y, beta##BC007035|NFYB|4801|nuclear transcription factor Y, beta##AK291934|NFYB|4801|nuclear transcription factor Y, beta##BC005316|NFYB|4801|nuclear transcription factor Y, beta##BC005317|NFYB|4801|nuclear transcription factor Y, beta##AK311706|NFYB|4801|nuclear transcription factor Y, beta##NM_006166|NFYB|4801|nuclear transcription factor Y, beta##NM_001093771|TXNRD1|7296|thioredoxin reductase 1##AK304241|TXNRD1|7296|thioredoxin reductase 1##AY057105|TXNRD1|7296|thioredoxin reductase 1##D28393|RPL18A|6142|ribosomal protein L18a	0.995902	CTCF.p2:2:0.996
chr20	47237614	47237751	reg1001850.p2	15.196	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-822364	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-822930	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1106998	+	AB037836 TSC_hg19_v1_chr20_-_47444291	206604	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	206757	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	300636	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.993193	CTCF.p2:24:0.993
chr5	142260182	142260312	reg1003263.p1	15.195	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-109939	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-110275	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-182676	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	522576	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	522859	-	BC015610 TSC_hg19_v1_chr5_-_142783214	522964	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.173923	
chr9	34675194	34675306	reg1001718.p1	15.194	+	AF082393 BC148263 AJ243542 AB010445 NM_006664	-12592	-	TSC_hg19_v1_chr9_+_34653922 AK075530 AK292073 BC003110 NM_004512 NM_147162 U32324	-21327	+	TSC_hg19_v1_chr9_+_34652201 NM_001142784	-23086	+	CR456868 U77180 AB590424 DQ895236 EU176240 U88321 BC027968 AK311945 AX772806 AB000887 NM_006274	15954	-	AF001979 CR450326 AB463486 DQ892048 DQ895242 AY358887 U88320 BC027918 AB002409 AK311901 TSC_hg19_v1_chr9_-_34710134 NM_002989	34854	-	AK301951 AK302320 NM_001141917	54248	-	AF082393|CCL27|10850|chemokine (C-C motif) ligand 27##BC148263|CCL27|10850|chemokine (C-C motif) ligand 27##AJ243542|CCL27|10850|chemokine (C-C motif) ligand 27##AB010445|CCL27|10850|chemokine (C-C motif) ligand 27##NM_006664|CCL27|10850|chemokine (C-C motif) ligand 27##AK075530|IL11RA|3590|interleukin 11 receptor, alpha##AK292073|IL11RA|3590|interleukin 11 receptor, alpha##BC003110|IL11RA|3590|interleukin 11 receptor, alpha##NM_004512|IL11RA|3590|interleukin 11 receptor, alpha##NM_147162|IL11RA|3590|interleukin 11 receptor, alpha##U32324|IL11RA|3590|interleukin 11 receptor, alpha##NM_001142784|IL11RA|3590|interleukin 11 receptor, alpha##CR456868|CCL19|6363|chemokine (C-C motif) ligand 19##U77180|CCL19|6363|chemokine (C-C motif) ligand 19##DQ895236|CCL19|6363|chemokine (C-C motif) ligand 19##EU176240|CCL19|6363|chemokine (C-C motif) ligand 19##U88321|CCL19|6363|chemokine (C-C motif) ligand 19##BC027968|CCL19|6363|chemokine (C-C motif) ligand 19##AK311945|CCL19|6363|chemokine (C-C motif) ligand 19##AX772806|CCL19|6363|chemokine (C-C motif) ligand 19##AB000887|CCL19|6363|chemokine (C-C motif) ligand 19##NM_006274|CCL19|6363|chemokine (C-C motif) ligand 19##AF001979|CCL21|6366|chemokine (C-C motif) ligand 21##CR450326|CCL21|6366|chemokine (C-C motif) ligand 21##DQ892048|CCL21|6366|chemokine (C-C motif) ligand 21##DQ895242|CCL21|6366|chemokine (C-C motif) ligand 21##AY358887|CCL21|6366|chemokine (C-C motif) ligand 21##U88320|CCL21|6366|chemokine (C-C motif) ligand 21##BC027918|CCL21|6366|chemokine (C-C motif) ligand 21##AB002409|CCL21|6366|chemokine (C-C motif) ligand 21##AK311901|CCL21|6366|chemokine (C-C motif) ligand 21##NM_002989|CCL21|6366|chemokine (C-C motif) ligand 21##AK302320|FAM205A|259308|family with sequence similarity 205, member A##NM_001141917|FAM205A|259308|family with sequence similarity 205, member A	1.30369	CTCF.p2:-30:0.887	CTCF.p2:34:0.417
chr12	13515322	13515445	reg1003183.p1	15.191	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-165654	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-165666	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-165745	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	617603	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	1003252	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	1022889	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.24242	CTCF.p2:-19:0.242
chr14	103571401	103571522	reg1001644.p1	15.191	+	BC113655 BC117375 NM_001077594 HQ258590	-4943	+	BC047871 BC048261 TSC_hg19_v1_chr14_-_103523736 AB032950 BC155541 NM_006035 BC078666 AF128625	-47724	-	AB384568 TSC_hg19_v1_chr14_-_103523568	-47920	-	TSC_hg19_v1_chr14_+_103589771 BC017818	18284	+	M92357 NM_006291 BC128449 BC128450 TSC_hg19_v1_chr14_+_103592873	21307	+	NM_001969 TSC_hg19_v1_chr14_+_103800527	229049	+	BC113655|EXOC3L4|91828|exocyst complex component 3-like 4##BC117375|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001077594|EXOC3L4|91828|exocyst complex component 3-like 4##HQ258590|EXOC3L4|91828|exocyst complex component 3-like 4##BC047871|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC048261|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AB032950|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC155541|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##NM_006035|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AF128625|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC017818|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_001969|EIF5|1983|eukaryotic translation initiation factor 5	0.99925	CTCF.p2:-9:0.999
chr1	245206076	245206203	reg1002479.p1	15.190	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-72456	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-72509	+	AK090927 AX746687 TSC_hg19_v1_chr1_+_245133411	-72777	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	112169	+	AK024733 NM_022743	1374572	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	1464415	-	AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK090927|EFCAB2|84288|EF-hand calcium binding domain 2##AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3	0.82428	CTCF.p2:14:0.824
chr16	90281835	90281947	reg1002433.p1	15.190	+	TSC_hg19_v1_chr16_+_90168671 AK092558 AX747598	-113215	+	AM690992 AM690991 AM690993 NM_001098173	-139557	-	AB527979 BC107033 AF274347 AF274348 NM_052996	-153230	-	None	None	None	None	None	None	None	None	None	AK092558|FAM157C|100132055|family with sequence similarity 157, member C##AM690992|PRDM7|11105|PR domain containing 7##AM690991|PRDM7|11105|PR domain containing 7##AM690993|PRDM7|11105|PR domain containing 7##NM_001098173|PRDM7|11105|PR domain containing 7##BC107033|PRDM7|11105|PR domain containing 7##AF274347|PRDM7|11105|PR domain containing 7##AF274348|PRDM7|11105|PR domain containing 7##NM_052996|PRDM7|11105|PR domain containing 7	0.899243	CTCF.p2:9:0.883
chr17	75243229	75243347	reg1001666.p1	15.190	+	AK293206 NM_001144001	-61994	+	TSC_hg19_v1_chr17_+_75137104 AK290913 BC142979 BC136523 BC136525	-106153	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	-106254	+	NM_001113491 AF189713 TSC_hg19_v1_chr17_+_75277583 AJ312323 AK300270 AK300268 BC054004	34254	+	AK290368 NM_001113492 TSC_hg19_v1_chr17_+_75283980	40691	+	TSC_hg19_v1_chr17_+_75315629 AJ312321 NM_006640	72322	+	AK293206|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001144001|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AK290913|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC142979|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136523|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136525|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001113491|SEPT9|10801|septin 9##AF189713|SEPT9|10801|septin 9##AJ312323|SEPT9|10801|septin 9##AK300270|SEPT9|10801|septin 9##AK300268|SEPT9|10801|septin 9##BC054004|SEPT9|10801|septin 9##AK290368|SEPT9|10801|septin 9##NM_001113492|SEPT9|10801|septin 9##AJ312321|SEPT9|10801|septin 9##NM_006640|SEPT9|10801|septin 9	0.992482	CTCF.p2:-5:0.992
chr9	67290293	67290424	reg1003056.p1	15.188	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-737083	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-796162	-	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	-831862	-	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	636458	+	TSC_hg19_v1_chr9_+_68726468 AK311167	1436144	+	TSC_hg19_v1_chr9_+_69065493 AK311167	1775180	+	BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene	0.92769	CTCF.p2:-8:0.928
chr20	36849584	36849713	reg1001933.p1	15.187	+	TSC_hg19_v1_chr20_-_36793673 AK291714 AK058031 AK295775 AK300292 AK314618 BC003551 NM_004613 NM_198951	-55969	-	TSC_hg19_v1_chr20_-_36758362 M98479	-91257	-	TSC_hg19_v1_chr20_+_36662228 AB463518 CU689672	-187371	+	AK096202 NM_001029864	39525	-	NM_001725 BC040955 TSC_hg19_v1_chr20_+_36932591 AK315328 AX713278 AX746123 AX752831 J04739 AK296568 BC032230 CU691936 DQ414688 AF322588	82940	+	TSC_hg19_v1_chr20_+_36974884 AK313625 BC022256 NM_004139 AY344471 AF105067 AB590524 CU692512 DQ891394 DQ894434 M35533	125223	+	AK291714|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK058031|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK295775|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK300292|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK314618|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC003551|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_004613|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_198951|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##M98479|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755##NM_001725|BPI|671|bactericidal/permeability-increasing protein##BC040955|BPI|671|bactericidal/permeability-increasing protein##AK315328|BPI|671|bactericidal/permeability-increasing protein##AX713278|BPI|671|bactericidal/permeability-increasing protein##AX746123|BPI|671|bactericidal/permeability-increasing protein##AX752831|BPI|671|bactericidal/permeability-increasing protein##J04739|BPI|671|bactericidal/permeability-increasing protein##AK296568|BPI|671|bactericidal/permeability-increasing protein##BC032230|BPI|671|bactericidal/permeability-increasing protein##DQ414688|BPI|671|bactericidal/permeability-increasing protein##AF322588|BPI|671|bactericidal/permeability-increasing protein##AK313625|LBP|3929|lipopolysaccharide binding protein##BC022256|LBP|3929|lipopolysaccharide binding protein##NM_004139|LBP|3929|lipopolysaccharide binding protein##AY344471|LBP|3929|lipopolysaccharide binding protein##AF105067|LBP|3929|lipopolysaccharide binding protein##DQ891394|LBP|3929|lipopolysaccharide binding protein##DQ894434|LBP|3929|lipopolysaccharide binding protein##M35533|LBP|3929|lipopolysaccharide binding protein	1.089424	CTCF.p2:30:0.972
chr1	182751553	182751688	reg1001499.p1	15.185	+	BC069677 BC069718 BC103865 BC103866 BC103867 AF297015 NM_001102450 NM_033345	-109579	-	AF493937 BT006638 CU675307 AB528682 U94829 U70426 BC006243 TSC_hg19_v1_chr1_-_182573525 AK301261 AK311880 NM_002928	-178150	-	CU675308 TSC_hg19_v1_chr1_+_182569465	-182174	+	NM_001200050 NM_001200051 NM_001200052 NM_001200056 NM_030769 BC042003	6964	+	BC034966 AK313225 BC058003 TSC_hg19_v1_chr1_+_182758907 AK297017 AK301068 AY336748	7271	+	TSC_hg19_v1_chr1_+_182808450 NM_001357 AK226102	56837	+	BC069677|RGS8|85397|regulator of G-protein signaling 8##BC069718|RGS8|85397|regulator of G-protein signaling 8##BC103865|RGS8|85397|regulator of G-protein signaling 8##BC103866|RGS8|85397|regulator of G-protein signaling 8##BC103867|RGS8|85397|regulator of G-protein signaling 8##AF297015|RGS8|85397|regulator of G-protein signaling 8##NM_001102450|RGS8|85397|regulator of G-protein signaling 8##NM_033345|RGS8|85397|regulator of G-protein signaling 8##AF493937|RGS16|6004|regulator of G-protein signaling 16##BT006638|RGS16|6004|regulator of G-protein signaling 16##U94829|RGS16|6004|regulator of G-protein signaling 16##U70426|RGS16|6004|regulator of G-protein signaling 16##BC006243|RGS16|6004|regulator of G-protein signaling 16##AK301261|RGS16|6004|regulator of G-protein signaling 16##AK311880|RGS16|6004|regulator of G-protein signaling 16##NM_002928|RGS16|6004|regulator of G-protein signaling 16##NM_001200050|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200051|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200052|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200056|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_030769|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC042003|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC034966|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK313225|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC058003|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK297017|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK301068|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AY336748|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	0.970514	CTCF.p2:10:0.971
chr2	113191208	113191341	reg1001744.p2	15.185	+	NM_005054 U64675 NM_001164463	-111	-	TSC_hg19_v1_chr2_+_113033193 AK131416	-158072	+	TSC_hg19_v1_chr2_+_113033173 NM_198581	-158113	+	TSC_hg19_v1_chr2_+_113239732 BC036819	48452	+	TSC_hg19_v1_chr2_+_113239762 NM_153712	48492	+	TSC_hg19_v1_chr2_+_113239813 AB071393 CU691434 DQ894075	48598	+	NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001164463|RGPD8|727851|RANBP2-like and GRIP domain containing 8##AK131416|ZC3H6|376940|zinc finger CCCH-type containing 6##NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6##BC036819|TTL|150465|tubulin tyrosine ligase##NM_153712|TTL|150465|tubulin tyrosine ligase##AB071393|TTL|150465|tubulin tyrosine ligase##DQ894075|TTL|150465|tubulin tyrosine ligase	0.033651	
chr2	227994658	227994793	reg1002800.p1	15.185	+	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	-293995	+	TSC_hg19_v1_chr2_-_227664534 S62539	-330226	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	-331246	-	TSC_hg19_v1_chr2_-_228028922 X81053	34177	-	NM_000092	34549	-	NM_000091 X80031 TSC_hg19_v1_chr2_+_228029337	34585	+	NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1##S62539|IRS1|3667|insulin receptor substrate 1##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##X81053|COL4A4|1286|collagen, type IV, alpha 4##NM_000092|COL4A4|1286|collagen, type IV, alpha 4##NM_000091|COL4A3|1285|collagen, type IV, alpha 3 (Goodpasture antigen)##X80031|COL4A3|1285|collagen, type IV, alpha 3 (Goodpasture antigen)	0.129577	
chr10	98155816	98155951	reg1003545.p1	15.183	+	AF367761 NM_001040102 NM_001040103 NM_033207	-36809	-	NM_001017520 NM_004088 AB046378 AK313615 M26144 BC012920 AK223317 DQ891465 DQ894645	-91715	+	AM180327 AM180328 AM180329 AM180330 AM180331 AM180332 AM180333 AM180334 AM180335 AM180336 AM180337 AM180338 AM180339 AM180340 AM180341 AM180342 AM180343 AM180344 AM180345 AM180346 BC018906 BC110298 AK027779 AF068180 AF068181 AK225546 NM_001114094 NM_013314	-124640	-	AB384048 BC113577 BC112341 BC112366 AB023149 BC013871 BC030548 TSC_hg19_v1_chr10_-_98273674 AK026106 NM_012465	117680	-	AK075451 TSC_hg19_v1_chr10_-_98290333	134454	-	AK074824 TSC_hg19_v1_chr10_-_98321895	165977	-	AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal##NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal##AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal##AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal##M26144|DNTT|1791|deoxynucleotidyltransferase, terminal##BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal##AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal##AM180327|BLNK|29760|B-cell linker##AM180328|BLNK|29760|B-cell linker##AM180329|BLNK|29760|B-cell linker##AM180330|BLNK|29760|B-cell linker##AM180331|BLNK|29760|B-cell linker##AM180332|BLNK|29760|B-cell linker##AM180333|BLNK|29760|B-cell linker##AM180334|BLNK|29760|B-cell linker##AM180335|BLNK|29760|B-cell linker##AM180336|BLNK|29760|B-cell linker##AM180337|BLNK|29760|B-cell linker##AM180338|BLNK|29760|B-cell linker##AM180339|BLNK|29760|B-cell linker##AM180340|BLNK|29760|B-cell linker##AM180341|BLNK|29760|B-cell linker##AM180342|BLNK|29760|B-cell linker##AM180343|BLNK|29760|B-cell linker##AM180344|BLNK|29760|B-cell linker##AM180345|BLNK|29760|B-cell linker##AM180346|BLNK|29760|B-cell linker##BC018906|BLNK|29760|B-cell linker##BC110298|BLNK|29760|B-cell linker##AK027779|BLNK|29760|B-cell linker##AF068180|BLNK|29760|B-cell linker##AF068181|BLNK|29760|B-cell linker##AK225546|BLNK|29760|B-cell linker##NM_001114094|BLNK|29760|B-cell linker##NM_013314|BLNK|29760|B-cell linker##BC113577|TLL2|7093|tolloid-like 2##BC112341|TLL2|7093|tolloid-like 2##BC112366|TLL2|7093|tolloid-like 2##AB023149|TLL2|7093|tolloid-like 2##BC013871|TLL2|7093|tolloid-like 2##BC030548|TLL2|7093|tolloid-like 2##AK026106|TLL2|7093|tolloid-like 2##NM_012465|TLL2|7093|tolloid-like 2##AK075451|TM9SF3|56889|transmembrane 9 superfamily member 3##AK074824|TM9SF3|56889|transmembrane 9 superfamily member 3	0.931674	CTCF.p2:-4:0.932
chr4	3347937	3348074	reg1002464.p1	15.182	+	TSC_hg19_v1_chr4_+_3318244 BC106944	-29703	+	AF030111 NM_002926 NM_198229	-32132	+	TSC_hg19_v1_chr4_+_3294763 AK310999 BC028154	-53245	+	AF030109 NM_198227	23718	+	BC112190 BC112192 TSC_hg19_v1_chr4_+_3443674	95662	+	TSC_hg19_v1_chr4_+_3443701 AK314099 D14012 NM_001528	95703	+	BC106944|RGS12|6002|regulator of G-protein signaling 12##AF030111|RGS12|6002|regulator of G-protein signaling 12##NM_002926|RGS12|6002|regulator of G-protein signaling 12##NM_198229|RGS12|6002|regulator of G-protein signaling 12##AK310999|RGS12|6002|regulator of G-protein signaling 12##BC028154|RGS12|6002|regulator of G-protein signaling 12##AF030109|RGS12|6002|regulator of G-protein signaling 12##NM_198227|RGS12|6002|regulator of G-protein signaling 12##BC112190|HGFAC|3083|HGF activator##BC112192|HGFAC|3083|HGF activator##AK314099|HGFAC|3083|HGF activator##D14012|HGFAC|3083|HGF activator##NM_001528|HGFAC|3083|HGF activator	0.0	
chr12	58015632	58015760	reg1002688.p1	15.181	+	AF331523 NM_133489	-2004	+	AF487514 BC047559 NM_182947	-10479	+	AB370196 NM_001111270 AK057416	-11665	+	AK293432 TSC_hg19_v1_chr12_-_58026433 AK302503	10749	-	M83651 TSC_hg19_v1_chr12_-_58026719	10969	-	TSC_hg19_v1_chr12_-_58026955 AB209460 AK289690 BC029828 NM_001478 AK299845	11248	-	AF331523|SLC26A10|65012|solute carrier family 26, member 10##NM_133489|SLC26A10|65012|solute carrier family 26, member 10##AF487514|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25##BC047559|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25##NM_182947|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25##AB370196|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25##NM_001111270|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25##AK293432|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK302503|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##M83651|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AB209460|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK289690|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##BC029828|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##NM_001478|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK299845|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1	0.997708	CTCF.p2:7:0.998
chr19	30251106	30251237	reg1003386.p1	15.181	+	TSC_hg19_v1_chr19_-_30206402 NM_031448	-44749	-	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	-45079	-	TSC_hg19_v1_chr19_+_30156375 AK225814	-94750	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	51730	+	BC026184 NM_001252641	163379	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	182111	+	NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone	1.011418	CTCF.p2:-4:0.999
chr9	136351551	136351661	reg1001589.p2	15.180	+	DQ891513 DQ894704 AK294974 BC013740 TSC_hg19_v1_chr9_-_136344222 AJ011372 AK225106 AK222919 AK074836 AK096630 Y17803 AK074927 NM_001145099 NM_017585	-7378	-	NM_001135775 NM_001242369 NM_001242370 NM_017586 AK075416 TSC_hg19_v1_chr9_+_136325120 AK304524 AK074852 AK311325 AK296343 AK075548 BC030558 AJ011373 AY358452 AK298820 CU688906	-26467	+	TSC_hg19_v1_chr9_+_136293730 AJ011374	-57866	+	NM_001080483	38461	-	AB011177 NM_001145320	45679	+	TSC_hg19_v1_chr9_+_136399879 BC050544 NM_014694	48319	+	DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001135775|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242369|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242370|C9orf7|11094|chromosome 9 open reading frame 7##NM_017586|C9orf7|11094|chromosome 9 open reading frame 7##AK075416|C9orf7|11094|chromosome 9 open reading frame 7##AK304524|C9orf7|11094|chromosome 9 open reading frame 7##AK074852|C9orf7|11094|chromosome 9 open reading frame 7##AK311325|C9orf7|11094|chromosome 9 open reading frame 7##AK296343|C9orf7|11094|chromosome 9 open reading frame 7##AK075548|C9orf7|11094|chromosome 9 open reading frame 7##BC030558|C9orf7|11094|chromosome 9 open reading frame 7##AJ011373|C9orf7|11094|chromosome 9 open reading frame 7##AY358452|C9orf7|11094|chromosome 9 open reading frame 7##AK298820|C9orf7|11094|chromosome 9 open reading frame 7##AJ011374|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_001080483|TMEM8C|389827|transmembrane protein 8C##AB011177|ADAMTSL2|9719|ADAMTS-like 2##NM_001145320|ADAMTSL2|9719|ADAMTS-like 2##BC050544|ADAMTSL2|9719|ADAMTS-like 2##NM_014694|ADAMTSL2|9719|ADAMTS-like 2	0.999864	CTCF.p2:10:1.000
chr10	30823574	30823697	reg1003117.p1	15.179	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-100514	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-100696	+	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	-185402	-	AF139543 BC066294 NM_183058	95000	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	464817	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	497186	-	AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438	0.996145	CTCF.p2:13:0.996
chr7	129650768	129650910	reg1002142.p1	15.179	+	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	-58030	-	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	-58088	-	L22454 NM_001040110	-380922	+	TSC_hg19_v1_chr7_-_129691215 BC000190 AB463378 AJ537494 AM393415 CU679956 BC011551 AF151050 AK001317 AK022373 NM_016478	40382	-	TSC_hg19_v1_chr7_+_129710381 BC044884 NM_014997 BC036464	59521	+	TSC_hg19_v1_chr7_+_129710402 D87454	59594	+	NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##L22454|NRF1|4899|nuclear respiratory factor 1##NM_001040110|NRF1|4899|nuclear respiratory factor 1##BC000190|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AJ537494|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AM393415|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC011551|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AF151050|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK001317|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK022373|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_016478|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC044884|KLHDC10|23008|kelch domain containing 10##NM_014997|KLHDC10|23008|kelch domain containing 10##BC036464|KLHDC10|23008|kelch domain containing 10##D87454|KLHDC10|23008|kelch domain containing 10	0.225287	CTCF.p2:32:0.225
chr19	4809733	4809846	reg1001987.p1	15.176	+	TSC_hg19_v1_chr19_+_4791757 AK074232 BC004988 AY356352 EU446817 AB384759 AJ311359	-17977	+	AK126532 AK315554 TSC_hg19_v1_chr19_+_4791756	-18033	+	NM_018708 TSC_hg19_v1_chr19_+_4791745	-18053	+	AF070530 TSC_hg19_v1_chr19_-_4817612	7769	-	TSC_hg19_v1_chr19_-_4831725 BC035331 NM_182919	21936	-	TSC_hg19_v1_chr19_-_4867650 AK225045 BC001590	57856	-	AK074232|FEM1A|55527|fem-1 homolog a (C. elegans)##BC004988|FEM1A|55527|fem-1 homolog a (C. elegans)##AY356352|FEM1A|55527|fem-1 homolog a (C. elegans)##EU446817|FEM1A|55527|fem-1 homolog a (C. elegans)##AJ311359|FEM1A|55527|fem-1 homolog a (C. elegans)##AK126532|FEM1A|55527|fem-1 homolog a (C. elegans)##AK315554|FEM1A|55527|fem-1 homolog a (C. elegans)##NM_018708|FEM1A|55527|fem-1 homolog a (C. elegans)##AF070530|TICAM1|148022|toll-like receptor adaptor molecule 1##BC035331|TICAM1|148022|toll-like receptor adaptor molecule 1##NM_182919|TICAM1|148022|toll-like receptor adaptor molecule 1##AK225045|PLIN3|10226|perilipin 3##BC001590|PLIN3|10226|perilipin 3	1.050969	CTCF.p2:-11:1.000
chr14	70041565	70041695	reg1003019.p1	15.175	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	-90150	+	TSC_hg19_v1_chr14_+_69865419 BC047682	-176194	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	-176235	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	36680	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	36761	+	TSC_hg19_v1_chr14_+_70233809 BX640605	192176	+	AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC047682|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##D87434|KIAA0247|9766|KIAA0247##BX640605|SRSF5|6430|serine/arginine-rich splicing factor 5	0.518001	CTCF.p2:-8:0.518
chr22	20810654	20810787	reg1002672.p1	15.175	+	TSC_hg19_v1_chr22_-_20792108 AB024433 AF522196 NM_153334 NM_182895	-18594	-	AB052951 TSC_hg19_v1_chr22_-_20792077	-18658	-	TSC_hg19_v1_chr22_+_20748463 BC056902 X92715 AK291358 AK299569 NM_003426 BC048295 BC013741	-62275	+	AK222850 TSC_hg19_v1_chr22_-_20850077 AK290669 AK294682 AK027266 BC015923 NM_032775	39402	-	TSC_hg19_v1_chr22_+_20861871 AK315540	51146	+	TSC_hg19_v1_chr22_+_20861877 AK074268	51156	+	AB024433|SCARF2|91179|scavenger receptor class F, member 2##AF522196|SCARF2|91179|scavenger receptor class F, member 2##NM_153334|SCARF2|91179|scavenger receptor class F, member 2##NM_182895|SCARF2|91179|scavenger receptor class F, member 2##AB052951|SCARF2|91179|scavenger receptor class F, member 2##BC056902|ZNF74|7625|zinc finger protein 74##X92715|ZNF74|7625|zinc finger protein 74##AK291358|ZNF74|7625|zinc finger protein 74##AK299569|ZNF74|7625|zinc finger protein 74##NM_003426|ZNF74|7625|zinc finger protein 74##BC048295|ZNF74|7625|zinc finger protein 74##BC013741|ZNF74|7625|zinc finger protein 74##AK222850|KLHL22|84861|kelch-like 22 (Drosophila)##AK290669|KLHL22|84861|kelch-like 22 (Drosophila)##AK294682|KLHL22|84861|kelch-like 22 (Drosophila)##AK027266|KLHL22|84861|kelch-like 22 (Drosophila)##BC015923|KLHL22|84861|kelch-like 22 (Drosophila)##NM_032775|KLHL22|84861|kelch-like 22 (Drosophila)##AK315540|MED15|51586|mediator complex subunit 15##AK074268|MED15|51586|mediator complex subunit 15	0.080628	
chr19	49946766	49946892	reg1000604.p1	15.174	+	AK294226 AB032436 TSC_hg19_v1_chr19_-_49944785 BC059379 NM_020309	-2083	-	NM_001195256	-17142	+	AY048588 BC093995 BC093997 AY037555 NM_178449	-20182	-	TSC_hg19_v1_chr19_-_49955072 AK294687 BC001108 AK000650 AK304476 NM_017916	8240	-	NM_001145396 NM_153329 TSC_hg19_v1_chr19_+_49956479 AK298587 AK074136	9652	+	AK297101 TSC_hg19_v1_chr19_+_49956529 BC014895 AK024182 AK301246	9701	+	AK294226|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##AB032436|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##BC059379|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##NM_020309|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##NM_001195256|LOC100507003|100507003|uncharacterized LOC100507003##AY048588|PTH2|113091|parathyroid hormone 2##BC093995|PTH2|113091|parathyroid hormone 2##BC093997|PTH2|113091|parathyroid hormone 2##AY037555|PTH2|113091|parathyroid hormone 2##NM_178449|PTH2|113091|parathyroid hormone 2##AK294687|PIH1D1|55011|PIH1 domain containing 1##BC001108|PIH1D1|55011|PIH1 domain containing 1##AK000650|PIH1D1|55011|PIH1 domain containing 1##AK304476|PIH1D1|55011|PIH1 domain containing 1##NM_017916|PIH1D1|55011|PIH1 domain containing 1##NM_001145396|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##NM_153329|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK298587|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK074136|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK297101|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##BC014895|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK024182|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK301246|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1	0.237909	CTCF.p2:-6:0.238
chr14	103759246	103759386	reg1003307.p1	15.173	+	M92357 NM_006291 BC128449 BC128450 TSC_hg19_v1_chr14_+_103592873	-166548	+	TSC_hg19_v1_chr14_+_103589771 BC017818	-169571	+	BC113655 BC117375 NM_001077594 HQ258590	-192798	+	NM_001969 TSC_hg19_v1_chr14_+_103800527	41194	+	TSC_hg19_v1_chr14_+_103800534 AL080102 AK026933	41224	+	TSC_hg19_v1_chr14_+_103800573 BC107884	41294	+	M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC017818|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC113655|EXOC3L4|91828|exocyst complex component 3-like 4##BC117375|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001077594|EXOC3L4|91828|exocyst complex component 3-like 4##HQ258590|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001969|EIF5|1983|eukaryotic translation initiation factor 5##AL080102|EIF5|1983|eukaryotic translation initiation factor 5##AK026933|EIF5|1983|eukaryotic translation initiation factor 5##BC107884|EIF5|1983|eukaryotic translation initiation factor 5	0.999808	CTCF.p2:3:1.000
chr8	81910657	81910761	reg1001303.p1	15.172	+	AK131274 NM_001033723	-123694	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-512225	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-826939	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	113605	-	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	282064	+	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	448960	-	AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2	1.885866	CTCF.p2:-21:0.999	CTCF.p2:-41:0.887
chr18	44731422	44731534	reg1002387.p1	15.171	+	TSC_hg19_v1_chr18_-_44702736 NM_016097	-28728	-	TSC_hg19_v1_chr18_-_44702734 AK027108	-28745	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	-28789	-	BC014840 NM_005901	725447	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	725737	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	726011	-	NM_016097|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2	0.955456	CTCF.p2:3:0.955
chr12	65190142	65190279	reg1002782.p1	15.169	+	TSC_hg19_v1_chr12_-_65153217 NM_002076	-37000	-	AK223484 AK302443 TSC_hg19_v1_chr12_-_65153187 AK296759 AK300350 AK304158 AK308094 BC012482	-37026	-	TSC_hg19_v1_chr12_-_65153163 AK308454 AK291771	-37051	-	NM_015279 TSC_hg19_v1_chr12_+_65218409 AK055404	28173	+	TSC_hg19_v1_chr12_+_65218446 AK299508	28234	+	AB527171 TSC_hg19_v1_chr12_+_65224283	34038	+	NM_002076|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK223484|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK302443|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK296759|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK300350|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK304158|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK308094|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##BC012482|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK308454|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK291771|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##NM_015279|TBC1D30|23329|TBC1 domain family, member 30##AK055404|TBC1D30|23329|TBC1 domain family, member 30##AK299508|TBC1D30|23329|TBC1 domain family, member 30	0.991049	CTCF.p2:-3:0.991
chr14	73415348	73415474	reg1002651.p1	15.167	+	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	-22276	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	-54603	-	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-1015545	+	AK098542 AF311602 NM_178441	38246	-	AB046809 TSC_hg19_v1_chr14_-_73493815 AJ310569 AK027399 BC014902 BC053520 NM_021260	78420	-	TSC_hg19_v1_chr14_+_73525218 BC062440 NM_021239	109798	+	AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AB046809|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AJ310569|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AK027399|ZFYVE1|53349|zinc finger, FYVE domain containing 1##BC014902|ZFYVE1|53349|zinc finger, FYVE domain containing 1##BC053520|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_021260|ZFYVE1|53349|zinc finger, FYVE domain containing 1##BC062440|RBM25|58517|RNA binding motif protein 25##NM_021239|RBM25|58517|RNA binding motif protein 25	0.996309	CTCF.p2:-4:0.996
chr19	44289571	44289700	reg1002605.p1	15.167	+	TSC_hg19_v1_chr19_-_44285437 AF022797 NM_002250	-4195	-	AB128983 AB128984 AB128985 AF000972 AF022150 BT007426 CU677271 DQ891493 DQ894684 BC015337 AF395661 TSC_hg19_v1_chr19_-_44285137 AF033021	-4560	-	TSC_hg19_v1_chr19_-_44259117 NM_019108	-30507	-	CU691254 AY358719 BC057816 AK301693 NM_001031749	16933	-	TSC_hg19_v1_chr19_-_44324785 AK055031 NM_182573	35152	-	AK294852 NM_181845 TSC_hg19_v1_chr19_+_44331566 AK098175	41875	+	AF022797|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##NM_002250|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128983|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128984|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128985|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF000972|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF022150|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##BT007426|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##DQ891493|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##DQ894684|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##BC015337|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF395661|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF033021|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##NM_019108|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY358719|LYPD5|284348|LY6/PLAUR domain containing 5##BC057816|LYPD5|284348|LY6/PLAUR domain containing 5##AK301693|LYPD5|284348|LY6/PLAUR domain containing 5##NM_001031749|LYPD5|284348|LY6/PLAUR domain containing 5##AK055031|LYPD5|284348|LY6/PLAUR domain containing 5##NM_182573|LYPD5|284348|LY6/PLAUR domain containing 5##AK294852|ZNF283|284349|zinc finger protein 283##NM_181845|ZNF283|284349|zinc finger protein 283##AK098175|ZNF283|284349|zinc finger protein 283	0.453482	CTCF.p2:8:0.453
chr5	90680781	90680926	reg1001764.p2	15.167	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-1721	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-4691	+	AK091866 TSC_hg19_v1_chr5_-_90610220	-70608	-	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	2236110	-	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	2238130	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	2239815	+	BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	1.690175	CTCF.p2:-27:0.867	CTCF.p2:50:0.823
chr16	22089148	22089283	reg1002789.p1	15.166	+	TSC_hg19_v1_chr16_+_22019464 NM_001164579 BC027604 BC053950	-69727	+	BC039562 BC021724 BC028605 NM_173806	-76787	-	TSC_hg19_v1_chr16_+_21964701 AB587386 DQ891390 DQ894565	-124494	+	AK098260 AK128606 AK307544 NM_173615	14646	+	TSC_hg19_v1_chr16_+_22217630 NM_013302 AK308757 BC032665	128458	+	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	219533	+	NM_001164579|C16orf52|730094|chromosome 16 open reading frame 52##BC027604|C16orf52|730094|chromosome 16 open reading frame 52##BC053950|C16orf52|730094|chromosome 16 open reading frame 52##BC039562|PDZD9|255762|PDZ domain containing 9##BC021724|PDZD9|255762|PDZ domain containing 9##BC028605|PDZD9|255762|PDZ domain containing 9##NM_173806|PDZD9|255762|PDZ domain containing 9##DQ891390|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##DQ894565|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##AK098260|VWA3A|146177|von Willebrand factor A domain containing 3A##AK128606|VWA3A|146177|von Willebrand factor A domain containing 3A##AK307544|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_173615|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase##BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)	0.925939	CTCF.p2:16:0.926
chr18	10520206	10520333	reg1002014.p2	15.164	+	TSC_hg19_v1_chr18_+_10454634 AK300743	-65617	+	TSC_hg19_v1_chr18_+_10454623 AB056722 AB104887 NM_153000	-65647	+	BC053324 TSC_hg19_v1_chr18_+_10454599	-65699	+	TSC_hg19_v1_chr18_+_10526021 NM_003826	5672	+	TSC_hg19_v1_chr18_+_10526033 AK294038 U78107 AK314495	5759	+	TSC_hg19_v1_chr18_+_10526051 BC001889	5787	+	AK300743|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AB056722|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AB104887|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##NM_153000|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##BC053324|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##NM_003826|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK294038|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##U78107|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK314495|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma	0.075635	
chr2	231766990	231767117	reg1002683.p1	15.164	+	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-37331	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-37375	+	TSC_hg19_v1_chr2_+_231729653 AK075361 AK090975 AK303199 AX746713	-37408	+	BC032694 NM_005683	22887	-	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	93839	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	135184	+	AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##AK075361|ITM2C|81618|integral membrane protein 2C##AK090975|ITM2C|81618|integral membrane protein 2C##AK303199|ITM2C|81618|integral membrane protein 2C##BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72	0.095609	
chr16	19918889	19919026	reg1002811.p1	15.163	+	AK295204 AF202640 TSC_hg19_v1_chr16_-_19896168 BC034467 AF181862 NM_016235 AK294680 AK075119 AK315989 AK296754	-22793	-	TSC_hg19_v1_chr16_-_19729532 BC117562 NM_001012991	-189470	-	TSC_hg19_v1_chr16_+_19727698 AF520569 AF520570 AK000122 NM_153208	-191220	+	AB196529 AY635179 BC137237 BC137238 BC144547 NM_001002911 AK291384	166130	-	U36221 AK312277 BX647831 BX648201 BX649067 BX648023 NM_001007240 NM_001007241 NM_001007242 NM_001502 CR749600	419896	-	AK127643 AK055722 AK091961 AK096043 AX747279 M15881 BC035975 AK127648 NM_001008389 NM_003361	445075	-	AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC117562|C16orf88|400506|chromosome 16 open reading frame 88##NM_001012991|C16orf88|400506|chromosome 16 open reading frame 88##AF520569|IQCK|124152|IQ motif containing K##AF520570|IQCK|124152|IQ motif containing K##AK000122|IQCK|124152|IQ motif containing K##NM_153208|IQCK|124152|IQ motif containing K##AB196529|GPR139|124274|G protein-coupled receptor 139##AY635179|GPR139|124274|G protein-coupled receptor 139##BC137237|GPR139|124274|G protein-coupled receptor 139##BC137238|GPR139|124274|G protein-coupled receptor 139##NM_001002911|GPR139|124274|G protein-coupled receptor 139##AK291384|GPR139|124274|G protein-coupled receptor 139##U36221|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK312277|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX647831|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648201|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX649067|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648023|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007240|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007241|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007242|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001502|GP2|2813|glycoprotein 2 (zymogen granule membrane)##CR749600|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK127643|UMOD|7369|uromodulin##AK055722|UMOD|7369|uromodulin##AK091961|UMOD|7369|uromodulin##AK096043|UMOD|7369|uromodulin##M15881|UMOD|7369|uromodulin##BC035975|UMOD|7369|uromodulin##AK127648|UMOD|7369|uromodulin##NM_001008389|UMOD|7369|uromodulin##NM_003361|UMOD|7369|uromodulin	0.931112	CTCF.p2:-7:0.931
chr14	100095288	100095412	reg1002535.p1	15.160	+	TSC_hg19_v1_chr14_-_100070545 NM_001144995	-24766	-	TSC_hg19_v1_chr14_+_99947745 NM_001099402 BC015935 AK311075	-147591	+	TSC_hg19_v1_chr14_-_99947224 BX161471 NM_032233 NM_199123 BC142995	-148129	-	AB593097 AY358173 NM_001127258 NM_032425 BC132877 BC136577 HQ258579 AB593096	16212	+	TSC_hg19_v1_chr14_+_100150596 AB209749 BC022539 AF094480 NM_006668	55325	+	TSC_hg19_v1_chr14_+_100204058 AK307925	108700	+	NM_001144995|CCDC85C|317762|coiled-coil domain containing 85C##NM_001099402|CCNK|8812|cyclin K##BC015935|CCNK|8812|cyclin K##AK311075|CCNK|8812|cyclin K##BX161471|SETD3|84193|SET domain containing 3##NM_032233|SETD3|84193|SET domain containing 3##NM_199123|SETD3|84193|SET domain containing 3##BC142995|SETD3|84193|SET domain containing 3##AB593097|HHIPL1|84439|HHIP-like 1##AY358173|HHIPL1|84439|HHIP-like 1##NM_001127258|HHIPL1|84439|HHIP-like 1##NM_032425|HHIPL1|84439|HHIP-like 1##BC132877|HHIPL1|84439|HHIP-like 1##BC136577|HHIPL1|84439|HHIP-like 1##HQ258579|HHIPL1|84439|HHIP-like 1##AB593096|HHIPL1|84439|HHIP-like 1##AB209749|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##BC022539|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##AF094480|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##NM_006668|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##AK307925|EML1|2009|echinoderm microtubule associated protein like 1	0.043127	
chr11	72354163	72354306	reg1002849.p1	15.159	+	TSC_hg19_v1_chr11_-_72353458 AY495089 AK131525 AK092278 AX747449 NM_001143839 NM_001243784	-755	-	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	-208584	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	-208658	-	AY495087 NM_001146209	25873	-	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	31219	-	AB018325 NM_001135190 NM_015242	79156	-	AK131525|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK092278|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001143839|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001243784|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AB018325|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_001135190|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_015242|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1	0.683918	CTCF.p2:13:0.684
chr2	97073214	97073313	reg1001625.p1	15.159	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-71727	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-71787	+	NM_178495 NM_001163524 BC034503	-81315	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	129222	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	230756	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	230804	-	BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_178495|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163524|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC034503|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.594486	CTCF.p2:-6:0.594
chr7	71198355	71198497	reg1002498.p1	15.159	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	-600638	+	TSC_hg19_v1_chr7_+_70231164 AK296981	-967221	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-2133838	+	AK123862 TSC_hg19_v1_chr7_-_71801809	603352	-	NM_001017440 TSC_hg19_v1_chr7_-_71802376	603878	-	NM_031468	678933	-	AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK296981|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2##AK123862|CALN1|83698|calneuron 1##NM_001017440|CALN1|83698|calneuron 1##NM_031468|CALN1|83698|calneuron 1	0.999398	CTCF.p2:20:0.999
chr2	110267806	110267934	reg1003068.p1	15.157	+	NM_001099289 DQ307286	-521807	+	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	-662123	-	TSC_hg19_v1_chr2_-_109605623 AK296936	-662251	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	103611	-	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	103855	-	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	104075	+	NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##AK296936|EDAR|10913|ectodysplasin A receptor##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57	0.550083	CTCF.p2:18:0.550
chr8	144976793	144976906	reg1001760.p2	15.155	+	AB051895 NM_031308	-29416	-	TSC_hg19_v1_chr8_-_144923180 BC071605 AK293943 NM_178564	-53690	-	TSC_hg19_v1_chr8_-_144911540 AF114818 AK292373 NM_014281 NM_078480	-65299	-	AF330791 TSC_hg19_v1_chr8_-_145013766 AY480051 NM_201384	36854	-	AY480050 NM_201383 TSC_hg19_v1_chr8_-_145016793	39912	-	AF330792 AY480049 TSC_hg19_v1_chr8_-_145018117 NM_201382	41255	-	AB051895|EPPK1|83481|epiplakin 1##NM_031308|EPPK1|83481|epiplakin 1##BC071605|NRBP2|340371|nuclear receptor binding protein 2##AK293943|NRBP2|340371|nuclear receptor binding protein 2##NM_178564|NRBP2|340371|nuclear receptor binding protein 2##AF114818|PUF60|22827|poly-U binding splicing factor 60KDa##AK292373|PUF60|22827|poly-U binding splicing factor 60KDa##NM_014281|PUF60|22827|poly-U binding splicing factor 60KDa##NM_078480|PUF60|22827|poly-U binding splicing factor 60KDa##AY480051|PLEC|5339|plectin##NM_201384|PLEC|5339|plectin##AY480050|PLEC|5339|plectin##NM_201383|PLEC|5339|plectin##AF330792|PLEC|5339|plectin##AY480049|PLEC|5339|plectin##NM_201382|PLEC|5339|plectin	0.998551	CTCF.p2:5:0.999
chr4	124694115	124694238	reg1002434.p1	15.153	+	AK026960 BC063856 NM_005841	-373503	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-376220	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-849924	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	939638	-	NM_024582	1543390	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	3859963	+	AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	0.911659	CTCF.p2:-3:0.912
chr3	143363458	143363594	reg1003045.p1	15.152	+	BC067737 TSC_hg19_v1_chr3_+_142895211	-468355	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-524875	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-643096	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	203741	-	NM_173552 AK315082	327126	+	TSC_hg19_v1_chr3_+_143690915 BC037293	327464	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58	0.945774	CTCF.p2:7:0.946
chr1	182112418	182112535	reg1001726.p1	15.150	+	BC137223 BC137224 AK128654 NM_001009992	-81679	-	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-659776	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-1054611	+	TSC_hg19_v1_chr1_-_182354649 AK301600	242206	-	TSC_hg19_v1_chr1_-_182357758 BC127883	245287	-	AY486122 S70290 AB528372 DQ893278 DQ896609 EU832658 EU832735 TSC_hg19_v1_chr1_-_182357935	245427	-	BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase##AY486122|GLUL|2752|glutamate-ammonia ligase##S70290|GLUL|2752|glutamate-ammonia ligase##DQ893278|GLUL|2752|glutamate-ammonia ligase##DQ896609|GLUL|2752|glutamate-ammonia ligase##EU832658|GLUL|2752|glutamate-ammonia ligase##EU832735|GLUL|2752|glutamate-ammonia ligase	0.999965	CTCF.p2:9:1.000
chr12	109058717	109058849	reg1002005.p2	15.150	+	TSC_hg19_v1_chr12_-_109027671 AK127638 AK298738 AK098315 NM_003006	-31121	-	TSC_hg19_v1_chr12_-_109027639 AK300057 AK290395 BC029782	-31150	-	AK225644 U02297 AK295238 TSC_hg19_v1_chr12_-_109027584	-31209	-	TSC_hg19_v1_chr12_-_109125268 AL162070 AK297463	66480	-	TSC_hg19_v1_chr12_-_109125284 BC002342 AB209909	66497	-	TSC_hg19_v1_chr12_-_109125295 AK023205 AK223073 AK304839 AK311315 AK316065 AB030656 NM_014325	66509	-	AK127638|SELPLG|6404|selectin P ligand##AK098315|SELPLG|6404|selectin P ligand##NM_003006|SELPLG|6404|selectin P ligand##AK290395|SELPLG|6404|selectin P ligand##BC029782|SELPLG|6404|selectin P ligand##AK225644|SELPLG|6404|selectin P ligand##U02297|SELPLG|6404|selectin P ligand##AK295238|SELPLG|6404|selectin P ligand##AL162070|CORO1C|23603|coronin, actin binding protein, 1C##AK297463|CORO1C|23603|coronin, actin binding protein, 1C##BC002342|CORO1C|23603|coronin, actin binding protein, 1C##AB209909|CORO1C|23603|coronin, actin binding protein, 1C##AK023205|CORO1C|23603|coronin, actin binding protein, 1C##AK223073|CORO1C|23603|coronin, actin binding protein, 1C##AK304839|CORO1C|23603|coronin, actin binding protein, 1C##AK311315|CORO1C|23603|coronin, actin binding protein, 1C##AK316065|CORO1C|23603|coronin, actin binding protein, 1C##AB030656|CORO1C|23603|coronin, actin binding protein, 1C##NM_014325|CORO1C|23603|coronin, actin binding protein, 1C	0.830872	CTCF.p2:-9:0.831
chr22	33975563	33975695	reg1001971.p1	15.150	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-521274	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-572903	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-777877	+	AJ007583 AB011181 NM_004737 NM_133642	340741	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1486520	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1677847	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.19085	
chr11	94884764	94884912	reg1002072.p2	15.149	+	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-61826	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-84430	+	TSC_hg19_v1_chr11_+_94800329 BC057783 BC006181	-84494	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	79466	-	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	637813	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	637895	-	AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8##BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B	0.540772	CTCF.p2:12:0.541
chr12	31138880	31139013	reg1003379.p1	15.149	+	AK300920 NM_001080509 TSC_hg19_v1_chr12_+_31079866 BC146917 BC146922	-59082	+	TSC_hg19_v1_chr12_+_31079681 AK293947	-59286	+	TSC_hg19_v1_chr12_+_31079362 BC084571	-59585	+	TSC_hg19_v1_chr12_-_31226728 AK096360	87786	-	TSC_hg19_v1_chr12_+_31226789 BC148224 BC111733 NM_004399 NM_030653 NM_152438 AK297607 BC050069	87832	+	TSC_hg19_v1_chr12_+_31226805 U75968 BC011264	87862	+	AK300920|TSPAN11|441631|tetraspanin 11##NM_001080509|TSPAN11|441631|tetraspanin 11##BC146917|TSPAN11|441631|tetraspanin 11##BC146922|TSPAN11|441631|tetraspanin 11##AK293947|TSPAN11|441631|tetraspanin 11##AK096360|LOC100506660|100506660|uncharacterized LOC100506660##BC148224|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_004399|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_030653|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_152438|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK297607|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050069|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75968|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC011264|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11	0.018585	
chr20	36192977	36193103	reg1002837.p1	15.148	+	TSC_hg19_v1_chr20_-_36156284 AK074498 NM_001167820 NM_006698	-36728	-	TSC_hg19_v1_chr20_-_36156274 AK124822 AF053470 BC047692 AL049288	-36787	-	NM_001167822 TSC_hg19_v1_chr20_-_36156087 BC071704 NM_001167821	-36933	-	TSC_hg19_v1_chr20_+_36322440 NM_030877 BC121005 BC121006 AF239607	129390	+	AK074663 AK130301 TSC_hg19_v1_chr20_+_36322443	129404	+	TSC_hg19_v1_chr20_+_36322503 AF370431 AK293420	129443	+	AK074498|BLCAP|10904|bladder cancer associated protein##NM_001167820|BLCAP|10904|bladder cancer associated protein##NM_006698|BLCAP|10904|bladder cancer associated protein##AK124822|BLCAP|10904|bladder cancer associated protein##AF053470|BLCAP|10904|bladder cancer associated protein##BC047692|BLCAP|10904|bladder cancer associated protein##AL049288|BLCAP|10904|bladder cancer associated protein##NM_001167822|BLCAP|10904|bladder cancer associated protein##BC071704|BLCAP|10904|bladder cancer associated protein##NM_001167821|BLCAP|10904|bladder cancer associated protein##NM_030877|CTNNBL1|56259|catenin, beta like 1##BC121005|CTNNBL1|56259|catenin, beta like 1##BC121006|CTNNBL1|56259|catenin, beta like 1##AF239607|CTNNBL1|56259|catenin, beta like 1##AK074663|CTNNBL1|56259|catenin, beta like 1##AK130301|CTNNBL1|56259|catenin, beta like 1##AF370431|CTNNBL1|56259|catenin, beta like 1##AK293420|CTNNBL1|56259|catenin, beta like 1	0.559682	CTCF.p2:-14:0.560
chr4	88072062	88072185	reg1002070.p1	15.148	+	TSC_hg19_v1_chr4_+_87968211 AF177238 AF177239	-103872	+	TSC_hg19_v1_chr4_+_87928422 L13773 BC114930 NM_005935 AK296243 L25050 AB385236	-143802	+	TSC_hg19_v1_chr4_+_87857481 L13743	-214640	+	BC041901 TSC_hg19_v1_chr4_-_88141661 BX640727 BX538173 NM_020803 CR749265 BX640744 BX647454 BC041384	69539	-	HQ258364 AY268355 BC112303 BC112305 AB073347 AK292784 AY186249 AY186250 NM_001136230 NM_178135 AY358575	171902	-	AB529195 CU690256 CU679009 AF273056 AY358553 TSC_hg19_v1_chr4_-_88312322 BC014327 BC021673	240148	-	AF177238|AFF1|4299|AF4/FMR2 family, member 1##AF177239|AFF1|4299|AF4/FMR2 family, member 1##L13773|AFF1|4299|AF4/FMR2 family, member 1##BC114930|AFF1|4299|AF4/FMR2 family, member 1##NM_005935|AFF1|4299|AF4/FMR2 family, member 1##AK296243|AFF1|4299|AF4/FMR2 family, member 1##L25050|AFF1|4299|AF4/FMR2 family, member 1##BC041901|KLHL8|57563|kelch-like 8 (Drosophila)##BX640727|KLHL8|57563|kelch-like 8 (Drosophila)##BX538173|KLHL8|57563|kelch-like 8 (Drosophila)##NM_020803|KLHL8|57563|kelch-like 8 (Drosophila)##CR749265|KLHL8|57563|kelch-like 8 (Drosophila)##BX640744|KLHL8|57563|kelch-like 8 (Drosophila)##BX647454|KLHL8|57563|kelch-like 8 (Drosophila)##BC041384|KLHL8|57563|kelch-like 8 (Drosophila)##HQ258364|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY268355|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112303|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112305|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AB073347|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AK292784|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186249|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186250|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_001136230|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_178135|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY358575|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	0.989407	CTCF.p2:6:0.989
chr12	32824952	32825090	reg1002844.p1	15.147	+	TSC_hg19_v1_chr12_+_32687260 AK303334	-137758	+	BC039708 BC063403 NM_139241 BC096746 AK057294 BC045552	-169982	+	AK313430 AK290188 NM_001003398 NM_001714 U90028 BC136372 TSC_hg19_v1_chr12_+_32260263	-564848	+	TSC_hg19_v1_chr12_+_32832187 AK302565 NM_005690 NM_012062 NM_012063 AK311606	7136	+	TSC_hg19_v1_chr12_+_32832234 AK299926 AF000430 AK291094 AK293290 AK294533 AK298568 BC107763 AB209070 AB006965 BC024590	7216	+	TSC_hg19_v1_chr12_+_32832277 AF061795 AF151685 AB384831 CU692924 DQ891544 DQ894732 BC000136	7302	+	AK303334|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)##U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK302565|DNM1L|10059|dynamin 1-like##NM_005690|DNM1L|10059|dynamin 1-like##NM_012062|DNM1L|10059|dynamin 1-like##NM_012063|DNM1L|10059|dynamin 1-like##AK311606|DNM1L|10059|dynamin 1-like##AK299926|DNM1L|10059|dynamin 1-like##AF000430|DNM1L|10059|dynamin 1-like##AK291094|DNM1L|10059|dynamin 1-like##AK293290|DNM1L|10059|dynamin 1-like##AK294533|DNM1L|10059|dynamin 1-like##AK298568|DNM1L|10059|dynamin 1-like##BC107763|DNM1L|10059|dynamin 1-like##AB209070|DNM1L|10059|dynamin 1-like##AB006965|DNM1L|10059|dynamin 1-like##BC024590|DNM1L|10059|dynamin 1-like##AF061795|DNM1L|10059|dynamin 1-like##AF151685|DNM1L|10059|dynamin 1-like##DQ891544|DNM1L|10059|dynamin 1-like##DQ894732|DNM1L|10059|dynamin 1-like	0.273285	CTCF.p2:9:0.273
chr7	140511007	140511128	reg1002740.p1	15.147	+	TSC_hg19_v1_chr7_+_140396507 AF067166 NM_004546 AF050639 BC063026 BC001168 CR542121	-114564	+	TSC_hg19_v1_chr7_+_140372910 AF131745 AY302592 NM_052853 BC014107	-138129	+	AB033103 TSC_hg19_v1_chr7_-_140340614	-170457	-	TSC_hg19_v1_chr7_-_140624512 AB529216 AK314346 BC101757 BC112079 M95712 NM_004333	113440	-	AF151897 AK024776 NM_016071	203400	-	TSC_hg19_v1_chr7_-_140714748 AF078858 BC105793	203683	-	AF067166|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##NM_004546|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF050639|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC063026|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC001168|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##CR542121|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF131745|ADCK2|90956|aarF domain containing kinase 2##AY302592|ADCK2|90956|aarF domain containing kinase 2##NM_052853|ADCK2|90956|aarF domain containing kinase 2##BC014107|ADCK2|90956|aarF domain containing kinase 2##AB033103|DENND2A|27147|DENN/MADD domain containing 2A##AK314346|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC101757|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC112079|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##M95712|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##NM_004333|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##AF151897|MRPS33|51650|mitochondrial ribosomal protein S33##AK024776|MRPS33|51650|mitochondrial ribosomal protein S33##NM_016071|MRPS33|51650|mitochondrial ribosomal protein S33##AF078858|MRPS33|51650|mitochondrial ribosomal protein S33##BC105793|MRPS33|51650|mitochondrial ribosomal protein S33	0.998425	CTCF.p2:-4:0.998
chr2	70844851	70844963	reg1002625.p1	15.146	+	NM_001099691 NM_003236	-63761	-	AK309220 AK309066 CU675103 BT006833 AF149096 AF149097 AF149098 X70340 K03222 M31172 AK290151 AK312899 BC005308 TSC_hg19_v1_chr2_-_70780995	-64099	-	AM393139 AB528755 AK225148 BC026293 TSC_hg19_v1_chr2_-_70529198 AL833147 BC014975 AK225151 AK309543 AK315877 AK027574 NM_032822	-315701	-	BC065525 NM_001185054	149939	-	TSC_hg19_v1_chr2_-_70995330 BC056881 BC051882 BC010237 BC041666 BC027876 AK297250 AK309773 AK291007 AB209227 AB593080 NM_001185055 NM_001617 NM_017482 NM_017488	150384	-	BC039536 AB463644 AY541030 NM_001004311	172845	-	NM_001099691|TGFA|7039|transforming growth factor, alpha##NM_003236|TGFA|7039|transforming growth factor, alpha##AK309220|TGFA|7039|transforming growth factor, alpha##AK309066|TGFA|7039|transforming growth factor, alpha##BT006833|TGFA|7039|transforming growth factor, alpha##AF149096|TGFA|7039|transforming growth factor, alpha##AF149097|TGFA|7039|transforming growth factor, alpha##AF149098|TGFA|7039|transforming growth factor, alpha##X70340|TGFA|7039|transforming growth factor, alpha##K03222|TGFA|7039|transforming growth factor, alpha##M31172|TGFA|7039|transforming growth factor, alpha##AK290151|TGFA|7039|transforming growth factor, alpha##AK312899|TGFA|7039|transforming growth factor, alpha##BC005308|TGFA|7039|transforming growth factor, alpha##AM393139|FAM136A|84908|family with sequence similarity 136, member A##AK225148|FAM136A|84908|family with sequence similarity 136, member A##BC026293|FAM136A|84908|family with sequence similarity 136, member A##AL833147|FAM136A|84908|family with sequence similarity 136, member A##BC014975|FAM136A|84908|family with sequence similarity 136, member A##AK225151|FAM136A|84908|family with sequence similarity 136, member A##AK309543|FAM136A|84908|family with sequence similarity 136, member A##AK315877|FAM136A|84908|family with sequence similarity 136, member A##AK027574|FAM136A|84908|family with sequence similarity 136, member A##NM_032822|FAM136A|84908|family with sequence similarity 136, member A##BC065525|ADD2|119|adducin 2 (beta)##NM_001185054|ADD2|119|adducin 2 (beta)##BC056881|ADD2|119|adducin 2 (beta)##BC051882|ADD2|119|adducin 2 (beta)##BC010237|ADD2|119|adducin 2 (beta)##BC041666|ADD2|119|adducin 2 (beta)##BC027876|ADD2|119|adducin 2 (beta)##AK297250|ADD2|119|adducin 2 (beta)##AK309773|ADD2|119|adducin 2 (beta)##AK291007|ADD2|119|adducin 2 (beta)##AB209227|ADD2|119|adducin 2 (beta)##AB593080|ADD2|119|adducin 2 (beta)##NM_001185055|ADD2|119|adducin 2 (beta)##NM_001617|ADD2|119|adducin 2 (beta)##NM_017482|ADD2|119|adducin 2 (beta)##NM_017488|ADD2|119|adducin 2 (beta)##BC039536|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##AY541030|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##NM_001004311|FIGLA|344018|folliculogenesis specific basic helix-loop-helix	0.998871	CTCF.p2:7:0.999
chr19	2637076	2637208	reg1003343.p1	15.144	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-160904	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-180182	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-180206	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	65553	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	65600	-	AK124445 TSC_hg19_v1_chr19_-_2717420	80207	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	1.222369	CTCF.p2:3:0.991	CTCF.p2:-47:0.231
chr11	128754760	128754879	reg1002004.p1	15.143	+	U12544 U12545 AK308032 U12543 U03884 AK308033 BC063109 NM_153764 NM_153765 NM_153766 NM_153767 U12542	-17620	-	BC136360 BC136361 BC074752 NM_000220 U12541 AK314267 AK290797	-42441	-	TSC_hg19_v1_chr11_+_128564132 AB385119 AY029368 CU674822 DQ892582 DQ896858	-190677	+	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	6521	+	DQ891644 DQ894833 TSC_hg19_v1_chr11_-_128774571	19710	-	BC025756 NM_145013	20772	-	U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AY029368|FLI1|2313|Friend leukemia virus integration 1##DQ892582|FLI1|2313|Friend leukemia virus integration 1##DQ896858|FLI1|2313|Friend leukemia virus integration 1##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##DQ891644|C11orf45|219833|chromosome 11 open reading frame 45##DQ894833|C11orf45|219833|chromosome 11 open reading frame 45##BC025756|C11orf45|219833|chromosome 11 open reading frame 45##NM_145013|C11orf45|219833|chromosome 11 open reading frame 45	0.720147	CTCF.p2:-30:0.720
chr4	171774686	171774809	reg1002686.p1	15.143	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-763333	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-763549	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-827242	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	959897	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	2315205	+	BC043556 TSC_hg19_v1_chr4_-_174090314	2315563	-	BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.042491	
chr16	84985937	84986057	reg1002526.p1	15.142	+	TSC_hg19_v1_chr16_+_84853586 NM_031476 AY358790 AK303887 AK308396 AY358413 BC063012 BC007689 AL136861 AK027395	-132394	+	TSC_hg19_v1_chr16_+_84733611 AL162049 BX537402 D80012	-252367	+	TSC_hg19_v1_chr16_+_84733609 AK293304 AK299618	-252390	+	TSC_hg19_v1_chr16_-_85045098 AK225768	59096	-	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	59132	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	75373	+	NM_031476|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AY358790|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK303887|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK308396|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC063012|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC007689|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AL136861|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK027395|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AL162049|USP10|9100|ubiquitin specific peptidase 10##BX537402|USP10|9100|ubiquitin specific peptidase 10##D80012|USP10|9100|ubiquitin specific peptidase 10##AK293304|USP10|9100|ubiquitin specific peptidase 10##AK299618|USP10|9100|ubiquitin specific peptidase 10##AK225768|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513	0.995017	CTCF.p2:0:0.995
chr18	31702813	31702955	reg1003243.p1	15.142	+	AK296539 NM_001198549	-74318	-	AB051500 TSC_hg19_v1_chr18_+_31319257	-383678	+	NM_030632 AK131454	-544325	+	NM_001198547	99549	-	AK297185 BC000313 TSC_hg19_v1_chr18_-_31803319	100359	-	AB017800 NM_001198546 NM_001198548 NM_003787	100630	-	AK296539|NOL4|8715|nucleolar protein 4##NM_001198549|NOL4|8715|nucleolar protein 4##AB051500|ASXL3|80816|additional sex combs like 3 (Drosophila)##NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)##AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)##NM_001198547|NOL4|8715|nucleolar protein 4##AK297185|NOL4|8715|nucleolar protein 4##BC000313|NOL4|8715|nucleolar protein 4##AB017800|NOL4|8715|nucleolar protein 4##NM_001198546|NOL4|8715|nucleolar protein 4##NM_001198548|NOL4|8715|nucleolar protein 4##NM_003787|NOL4|8715|nucleolar protein 4	1.157147	CTCF.p2:23:0.873	CTCF.p2:-29:0.284
chr2	224592341	224592469	reg1002961.p1	15.142	+	TSC_hg19_v1_chr2_-_224467145 NM_003469	-125226	-	TSC_hg19_v1_chr2_-_224467100 BC022509	-125298	-	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	-125339	-	AF393369 BC021898 TSC_hg19_v1_chr2_-_224702284 AK025338 AK299026	109844	-	TSC_hg19_v1_chr2_-_224702300 BC009606 NM_001039569	109905	-	TSC_hg19_v1_chr2_-_224810010 AF411977 AB527455 CU691898	217588	-	NM_003469|SCG2|7857|secretogranin II##BC022509|SCG2|7857|secretogranin II##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II##AF393369|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##BC021898|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK025338|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK299026|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##BC009606|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##NM_001039569|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AF411977|WDFY1|57590|WD repeat and FYVE domain containing 1	0.978307	CTCF.p2:-3:0.978
chr3	172208067	172208160	reg1001584.p1	15.142	+	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	-41890	-	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-449776	+	TSC_hg19_v1_chr3_+_171757442 AY358367	-450655	+	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	33065	-	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	220777	-	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	260411	+	AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AY358367|FNDC3B|64778|fibronectin type III domain containing 3B##AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene	0.998985	CTCF.p2:-2:0.999
chr17	41755369	41755507	reg1002739.p1	15.140	+	NM_001040002 AK291139	-16163	-	AB527749 CU686836 EU446636 BC069474 BC069506 NM_004527 NM_013999 U10492 U10493	-16523	-	TSC_hg19_v1_chr17_-_41623674 AK315961 U18018 NM_001079675	-131712	-	BC101086 BC101087 BC101088 BC101089 AF331844 AF326739 NM_025237	80705	-	AK226170 TSC_hg19_v1_chr17_-_41856314 AB451424 BT019522 CU678116 DQ893122 DQ896399 BC035701 AK129822 L05147 BC002682 NM_004090	100846	-	BC054872 BC070324 NM_001136483 BC146971 AK125817	102376	+	NM_001040002|MEOX1|4222|mesenchyme homeobox 1##AK291139|MEOX1|4222|mesenchyme homeobox 1##EU446636|MEOX1|4222|mesenchyme homeobox 1##BC069474|MEOX1|4222|mesenchyme homeobox 1##BC069506|MEOX1|4222|mesenchyme homeobox 1##NM_004527|MEOX1|4222|mesenchyme homeobox 1##NM_013999|MEOX1|4222|mesenchyme homeobox 1##U10492|MEOX1|4222|mesenchyme homeobox 1##U10493|MEOX1|4222|mesenchyme homeobox 1##AK315961|ETV4|2118|ets variant 4##U18018|ETV4|2118|ets variant 4##NM_001079675|ETV4|2118|ets variant 4##BC101086|SOST|50964|sclerostin##BC101087|SOST|50964|sclerostin##BC101088|SOST|50964|sclerostin##BC101089|SOST|50964|sclerostin##AF331844|SOST|50964|sclerostin##AF326739|SOST|50964|sclerostin##NM_025237|SOST|50964|sclerostin##AK226170|DUSP3|1845|dual specificity phosphatase 3##AB451424|DUSP3|1845|dual specificity phosphatase 3##BT019522|DUSP3|1845|dual specificity phosphatase 3##DQ893122|DUSP3|1845|dual specificity phosphatase 3##DQ896399|DUSP3|1845|dual specificity phosphatase 3##BC035701|DUSP3|1845|dual specificity phosphatase 3##AK129822|DUSP3|1845|dual specificity phosphatase 3##L05147|DUSP3|1845|dual specificity phosphatase 3##BC002682|DUSP3|1845|dual specificity phosphatase 3##NM_004090|DUSP3|1845|dual specificity phosphatase 3##BC054872|C17orf105|284067|chromosome 17 open reading frame 105##BC070324|C17orf105|284067|chromosome 17 open reading frame 105##NM_001136483|C17orf105|284067|chromosome 17 open reading frame 105##BC146971|C17orf105|284067|chromosome 17 open reading frame 105##AK125817|C17orf105|284067|chromosome 17 open reading frame 105	0.999945	CTCF.p2:14:1.000
chr1	45978390	45978524	reg1003163.p1	15.139	+	AK098537 NM_015506 TSC_hg19_v1_chr1_+_45965990 AL080062 BC006122	-12518	+	TSC_hg19_v1_chr1_-_45956836 BX648441 AK027573 AK294172 BC022194 AB057597 AJ132545 AK299269 NM_007170 AK302494	-21624	-	TSC_hg19_v1_chr1_+_45805883 AK298162 AK093320 BC009364 CU679325 CR457320	-172557	+	X67951 L19184 TSC_hg19_v1_chr1_-_45987557 AK311898 BC007063 AK131049 BC021683 NM_002574 NM_181696 NM_181697	9121	-	NM_001202431	10104	-	NM_001202413 NM_001202414 NM_006066 NM_153326 TSC_hg19_v1_chr1_+_46016497 AK311175 AK307068	38031	+	AK098537|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##NM_015506|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##AL080062|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BC006122|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BX648441|TESK2|10420|testis-specific kinase 2##AK027573|TESK2|10420|testis-specific kinase 2##AK294172|TESK2|10420|testis-specific kinase 2##BC022194|TESK2|10420|testis-specific kinase 2##AB057597|TESK2|10420|testis-specific kinase 2##AJ132545|TESK2|10420|testis-specific kinase 2##AK299269|TESK2|10420|testis-specific kinase 2##NM_007170|TESK2|10420|testis-specific kinase 2##AK302494|TESK2|10420|testis-specific kinase 2##AK298162|TOE1|114034|target of EGR1, member 1 (nuclear)##AK093320|TOE1|114034|target of EGR1, member 1 (nuclear)##BC009364|TOE1|114034|target of EGR1, member 1 (nuclear)##CR457320|TOE1|114034|target of EGR1, member 1 (nuclear)##X67951|PRDX1|5052|peroxiredoxin 1##L19184|PRDX1|5052|peroxiredoxin 1##AK311898|PRDX1|5052|peroxiredoxin 1##BC007063|PRDX1|5052|peroxiredoxin 1##AK131049|PRDX1|5052|peroxiredoxin 1##BC021683|PRDX1|5052|peroxiredoxin 1##NM_002574|PRDX1|5052|peroxiredoxin 1##NM_181696|PRDX1|5052|peroxiredoxin 1##NM_181697|PRDX1|5052|peroxiredoxin 1##NM_001202431|PRDX1|5052|peroxiredoxin 1##NM_001202413|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_001202414|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_006066|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_153326|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307068|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	0.994807	CTCF.p2:-11:0.995
chr2	118227949	118228077	reg1003053.p1	15.139	+	NM_001178034 DQ857322 AK296490 NM_001004360 AY387785 AB040925 AB385475 DQ857323	-2308352	+	NM_001178037 DQ857321	-2405723	+	AK055256 BC038514 NM_001178036	-3008847	+	NM_006773 TSC_hg19_v1_chr2_+_118572276 BC024739	344255	+	AK001467 TSC_hg19_v1_chr2_+_118572283	344270	+	TSC_hg19_v1_chr2_+_118572298 BC003360 BC001238	344304	+	NM_001178034|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857322|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK296490|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001004360|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AY387785|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AB040925|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857323|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178037|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857321|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_006773|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC024739|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##AK001467|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC003360|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC001238|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	0.995135	CTCF.p2:-10:0.995
chr12	105073965	105074100	reg1002874.p1	15.137	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-222945	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-223224	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-223261	+	TSC_hg19_v1_chr12_+_105153261 AF131762	79245	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	248231	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	306058	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.0	
chr6	151645479	151645618	reg1002980.p1	15.137	+	TSC_hg19_v1_chr6_+_151561677 BC000188 BC022814 BC015830 AB384670 AF001504	-83810	+	TSC_hg19_v1_chr6_+_151561578 BC006094	-83967	+	U81607 TSC_hg19_v1_chr6_+_151561544 AB210003 BC046095 AK307578	-84020	+	TSC_hg19_v1_chr6_+_151646810 NM_144497 AK307739 BC070151 AB003476 BC117679 BC117680	1229	+	TSC_hg19_v1_chr6_-_151712650 BC020172 NM_020861 AK092886 AX747790 AK291942	67162	-	TSC_hg19_v1_chr6_-_151773262 BC119683 AK000634 BC106065 AK292339 NM_017909	127710	-	BC000188|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC022814|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC015830|AKAP12|9590|A kinase (PRKA) anchor protein 12##AF001504|AKAP12|9590|A kinase (PRKA) anchor protein 12##U81607|AKAP12|9590|A kinase (PRKA) anchor protein 12##AB210003|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC046095|AKAP12|9590|A kinase (PRKA) anchor protein 12##AK307578|AKAP12|9590|A kinase (PRKA) anchor protein 12##NM_144497|AKAP12|9590|A kinase (PRKA) anchor protein 12##AK307739|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC070151|AKAP12|9590|A kinase (PRKA) anchor protein 12##AB003476|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC117679|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC117680|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC020172|ZBTB2|57621|zinc finger and BTB domain containing 2##NM_020861|ZBTB2|57621|zinc finger and BTB domain containing 2##AK092886|ZBTB2|57621|zinc finger and BTB domain containing 2##AK291942|ZBTB2|57621|zinc finger and BTB domain containing 2##BC119683|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK000634|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##BC106065|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK292339|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##NM_017909|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)	0.952772	CTCF.p2:6:0.953
chr3	112361879	112362011	reg1002825.p1	15.135	+	AY548106 AY548107 TSC_hg19_v1_chr3_-_112359991 BC110842 AY526612 NM_199511 NM_199512 AK304561	-1968	-	BX647117 TSC_hg19_v1_chr3_-_112359888 BC116178 BC116179 AY333429 AF506819	-2062	-	TSC_hg19_v1_chr3_-_112359660 AK292881	-2279	-	BC144504 BC144507 AY284976 AY552790 NM_001008784 NM_001199215	202847	-	AF283760 BC069661 BC069721 BC069743 AF495380 AF497548 AF497549 AF497550 BC093890 BC143393 AK304426 AK293071 AY284975 AK126349 NM_138806 NM_138939 NM_138940 NM_170780 AY358910	331890	-	TSC_hg19_v1_chr3_+_112709777 AK292651	347833	+	AY548106|CCDC80|151887|coiled-coil domain containing 80##AY548107|CCDC80|151887|coiled-coil domain containing 80##BC110842|CCDC80|151887|coiled-coil domain containing 80##AY526612|CCDC80|151887|coiled-coil domain containing 80##NM_199511|CCDC80|151887|coiled-coil domain containing 80##NM_199512|CCDC80|151887|coiled-coil domain containing 80##AK304561|CCDC80|151887|coiled-coil domain containing 80##BX647117|CCDC80|151887|coiled-coil domain containing 80##BC116178|CCDC80|151887|coiled-coil domain containing 80##BC116179|CCDC80|151887|coiled-coil domain containing 80##AY333429|CCDC80|151887|coiled-coil domain containing 80##AF506819|CCDC80|151887|coiled-coil domain containing 80##AK292881|CCDC80|151887|coiled-coil domain containing 80##BC144504|CD200R1L|344807|CD200 receptor 1-like##BC144507|CD200R1L|344807|CD200 receptor 1-like##AY284976|CD200R1L|344807|CD200 receptor 1-like##AY552790|CD200R1L|344807|CD200 receptor 1-like##NM_001008784|CD200R1L|344807|CD200 receptor 1-like##NM_001199215|CD200R1L|344807|CD200 receptor 1-like##AF283760|CD200R1|131450|CD200 receptor 1##BC069661|CD200R1|131450|CD200 receptor 1##BC069721|CD200R1|131450|CD200 receptor 1##BC069743|CD200R1|131450|CD200 receptor 1##AF495380|CD200R1|131450|CD200 receptor 1##AF497548|CD200R1|131450|CD200 receptor 1##AF497549|CD200R1|131450|CD200 receptor 1##AF497550|CD200R1|131450|CD200 receptor 1##BC093890|CD200R1|131450|CD200 receptor 1##BC143393|CD200R1|131450|CD200 receptor 1##AK304426|CD200R1|131450|CD200 receptor 1##AK293071|CD200R1|131450|CD200 receptor 1##AY284975|CD200R1|131450|CD200 receptor 1##AK126349|CD200R1|131450|CD200 receptor 1##NM_138806|CD200R1|131450|CD200 receptor 1##NM_138939|CD200R1|131450|CD200 receptor 1##NM_138940|CD200R1|131450|CD200 receptor 1##NM_170780|CD200R1|131450|CD200 receptor 1##AY358910|CD200R1|131450|CD200 receptor 1##AK292651|GTPBP8|29083|GTP-binding protein 8 (putative)	0.950168	CTCF.p2:-9:0.950
chr8	66746922	66747058	reg1002861.p1	15.135	+	HQ258418 AK290801 BC058025 BC126360 NM_002603 U67932	-45739	-	NM_001145838 CU692168 BX537854 D13634	-164823	+	NM_001145839 NM_014637 TSC_hg19_v1_chr8_+_66556973 AK316202 BX647507 AK304716 BC036116 BC043498 AK298945	-190030	+	NM_001242318	6978	-	TSC_hg19_v1_chr8_-_66754300 AK292680	7302	-	NM_033105 BC016742 AF368276 AL133660	186829	+	HQ258418|PDE7A|5150|phosphodiesterase 7A##AK290801|PDE7A|5150|phosphodiesterase 7A##BC058025|PDE7A|5150|phosphodiesterase 7A##BC126360|PDE7A|5150|phosphodiesterase 7A##NM_002603|PDE7A|5150|phosphodiesterase 7A##U67932|PDE7A|5150|phosphodiesterase 7A##NM_001145838|MTFR1|9650|mitochondrial fission regulator 1##BX537854|MTFR1|9650|mitochondrial fission regulator 1##D13634|MTFR1|9650|mitochondrial fission regulator 1##NM_001145839|MTFR1|9650|mitochondrial fission regulator 1##NM_014637|MTFR1|9650|mitochondrial fission regulator 1##AK316202|MTFR1|9650|mitochondrial fission regulator 1##BX647507|MTFR1|9650|mitochondrial fission regulator 1##AK304716|MTFR1|9650|mitochondrial fission regulator 1##BC036116|MTFR1|9650|mitochondrial fission regulator 1##BC043498|MTFR1|9650|mitochondrial fission regulator 1##AK298945|MTFR1|9650|mitochondrial fission regulator 1##NM_001242318|PDE7A|5150|phosphodiesterase 7A##AK292680|PDE7A|5150|phosphodiesterase 7A##NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta	0.990583	CTCF.p2:-8:0.991
chr6	47277712	47277840	reg1001934.p1	15.134	+	TSC_hg19_v1_chr6_-_47277647 NM_014452	-81	-	AK315560 TSC_hg19_v1_chr6_-_47277645	-131	-	AK001504 TSC_hg19_v1_chr6_-_47277640	-136	-	TSC_hg19_v1_chr6_+_47445524 NM_012120	167739	+	TSC_hg19_v1_chr6_+_47445937 AF146277 BC069444	168140	+	AY140953 DQ315369 NM_153839	346497	+	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AK315560|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AK001504|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##NM_012120|CD2AP|23607|CD2-associated protein##AF146277|CD2AP|23607|CD2-associated protein##BC069444|CD2AP|23607|CD2-associated protein##AY140953|GPR111|222611|G protein-coupled receptor 111##DQ315369|GPR111|222611|G protein-coupled receptor 111##NM_153839|GPR111|222611|G protein-coupled receptor 111	0.023691	
chr1	220950153	220950295	reg1002692.p1	15.130	+	TSC_hg19_v1_chr1_+_220921664 AL136931 BC011973 NM_017898 BC016859	-28580	+	NM_024709 TSC_hg19_v1_chr1_+_220863727 BC036067 AK091937 AK056749 AK056749 AK024208	-86522	+	AK098103 AK314614 AF154845 BC113869 BC114478 TSC_hg19_v1_chr1_+_220702027 AK295506 AB385474	-248242	+	NM_022746 TSC_hg19_v1_chr1_+_220960254 AK026043 AK225416 AK094105 AK290812 BC010619	9939	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	102537	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	102690	+	AL136931|MARC2|54996|mitochondrial amidoxime reducing component 2##BC011973|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_017898|MARC2|54996|mitochondrial amidoxime reducing component 2##BC016859|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_024709|C1orf115|79762|chromosome 1 open reading frame 115##BC036067|C1orf115|79762|chromosome 1 open reading frame 115##AK091937|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK024208|C1orf115|79762|chromosome 1 open reading frame 115##AK098103|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK314614|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AF154845|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC113869|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC114478|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK295506|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##NM_022746|MARC1|64757|mitochondrial amidoxime reducing component 1##AK026043|MARC1|64757|mitochondrial amidoxime reducing component 1##AK225416|MARC1|64757|mitochondrial amidoxime reducing component 1##AK094105|MARC1|64757|mitochondrial amidoxime reducing component 1##AK290812|MARC1|64757|mitochondrial amidoxime reducing component 1##BC010619|MARC1|64757|mitochondrial amidoxime reducing component 1##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox	0.31987	CTCF.p2:12:0.320
chr2	98423332	98423441	reg1002161.p1	15.129	+	AK025852 TSC_hg19_v1_chr2_-_98408976	-14464	-	AB083211 NM_207519	-72518	+	L05148 NM_001079 AK303341 AK310637 AK310628 BC053878	-93344	+	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	188800	-	TSC_hg19_v1_chr2_-_98612395 AK098792	189017	-	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	280260	+	AK025852|TMEM131|23505|transmembrane protein 131##AB083211|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_207519|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##L05148|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_001079|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK303341|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310637|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310628|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##BC053878|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##AK098792|TMEM131|23505|transmembrane protein 131##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B	0.995567	CTCF.p2:-13:0.996
chr11	17085079	17085188	reg1002025.p2	15.128	+	AB385210 TSC_hg19_v1_chr11_-_17035962 BC071599 NM_175058	-49168	-	TSC_hg19_v1_chr11_-_16996590 D28414	-88557	-	TSC_hg19_v1_chr11_+_16760204 BC103747 AK315382 BC007103 BC016352 BC020937 U51678 CR456882 CU675547 AK124165	-324849	+	X79239 AB528349 CU688732 TSC_hg19_v1_chr11_-_17099216 DQ891107 DQ894288 BC000475 BC029732 BC100032 BC006772 AK312060 BC066322 D28429 L01124 NM_001017	14106	-	Y13367 AB385161 HQ258691 BC113658 NM_002645	106187	-	TSC_hg19_v1_chr11_-_17229534 AK309610 AK299474 AK304262 BC040952 BC031681 AK294416 BC035982 AK310248	144364	-	BC071599|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##NM_175058|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##D28414|RPL36A|6173|ribosomal protein L36a##BC103747|C11orf58|10944|chromosome 11 open reading frame 58##AK315382|C11orf58|10944|chromosome 11 open reading frame 58##BC007103|C11orf58|10944|chromosome 11 open reading frame 58##BC016352|C11orf58|10944|chromosome 11 open reading frame 58##BC020937|C11orf58|10944|chromosome 11 open reading frame 58##U51678|C11orf58|10944|chromosome 11 open reading frame 58##CR456882|C11orf58|10944|chromosome 11 open reading frame 58##X79239|RPS13|6207|ribosomal protein S13##DQ891107|RPS13|6207|ribosomal protein S13##DQ894288|RPS13|6207|ribosomal protein S13##BC000475|RPS13|6207|ribosomal protein S13##BC029732|RPS13|6207|ribosomal protein S13##BC100032|RPS13|6207|ribosomal protein S13##BC006772|RPS13|6207|ribosomal protein S13##AK312060|RPS13|6207|ribosomal protein S13##BC066322|RPS13|6207|ribosomal protein S13##L01124|RPS13|6207|ribosomal protein S13##NM_001017|RPS13|6207|ribosomal protein S13##Y13367|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##HQ258691|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##BC113658|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##NM_002645|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK309610|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK299474|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK304262|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##BC040952|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##BC031681|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK294416|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK310248|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide	0.997455	CTCF.p2:11:0.997
chr2	232542478	232542606	reg1002368.p1	15.128	+	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	-84925	+	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	-147388	-	BC033054 TSC_hg19_v1_chr2_-_232379076	-163460	-	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	30692	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	30790	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	103383	-	NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta	0.993622	CTCF.p2:-15:0.994
chr10	29593580	29593701	reg1002013.p1	15.127	+	NM_032517 BC021730 AY358694	-15624	+	TSC_hg19_v1_chr10_+_28966451 NM_012342 AK290639 BC019252 AK223065 U23070	-627193	+	TSC_hg19_v1_chr10_+_28878692 BC010356	-714934	+	TSC_hg19_v1_chr10_+_29698475 BC066966 BC050354	104829	+	BC107795 AK056080 TSC_hg19_v1_chr10_+_29698485	104845	+	TSC_hg19_v1_chr10_+_29698496 BC073888	104858	+	NM_032517|LYZL1|84569|lysozyme-like 1##BC021730|LYZL1|84569|lysozyme-like 1##AY358694|LYZL1|84569|lysozyme-like 1##NM_012342|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK290639|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC019252|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK223065|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##U23070|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC010356|WAC|51322|WW domain containing adaptor with coiled-coil##BC066966|LOC387647|387647|patched domain containing 3 pseudogene##BC050354|LOC387647|387647|patched domain containing 3 pseudogene##BC107795|LOC387647|387647|patched domain containing 3 pseudogene##AK056080|LOC387647|387647|patched domain containing 3 pseudogene##BC073888|LOC387647|387647|patched domain containing 3 pseudogene	0.055383	
chr12	131589341	131589453	reg1002473.p1	15.127	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-150944	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-232686	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-232772	+	TSC_hg19_v1_chr12_+_132195623 BC142980	606216	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	606259	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	723569	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.997312	CTCF.p2:-4:0.997
chr10	32059380	32059491	reg1001727.p2	15.125	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-449346	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-451302	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-451478	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	158289	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	158350	-	TSC_hg19_v1_chr10_-_32344938 AB462413	285497	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.954149	CTCF.p2:-11:0.954
chr5	14648785	14648909	reg1002115.p1	15.124	+	TSC_hg19_v1_chr5_+_14581949 AK001989 BC011524 CU679940	-66883	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	-66947	+	TSC_hg19_v1_chr5_+_14488527 AK131423	-160308	+	AK123396 TSC_hg19_v1_chr5_-_14664742	15880	-	TSC_hg19_v1_chr5_+_14664772 NM_138348	15929	+	TSC_hg19_v1_chr5_+_14664826 BC015392	15994	+	AK001989|FAM105A|54491|family with sequence similarity 105, member A##BC011524|FAM105A|54491|family with sequence similarity 105, member A##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##AK123396|LOC728178|728178|uncharacterized LOC728178##NM_138348|FAM105B|90268|family with sequence similarity 105, member B##BC015392|FAM105B|90268|family with sequence similarity 105, member B	0.99859	CTCF.p2:25:0.999
chr3	37896999	37897111	reg1002038.p1	15.123	+	TSC_hg19_v1_chr3_+_37493631 BC030198 D25303 NM_002207 L24158	-403301	+	NM_178339 NM_178342 AJ493604 AJ493603	-456041	+	TSC_hg19_v1_chr3_+_37284761 BC045543 NM_001172713 NM_002078 BC050444 AK290550 BC023648 AK300192 AK307429 AB209693 U41740 X82834	-612292	+	TSC_hg19_v1_chr3_+_37903656 AJ575644 AJ575645 NM_001008392 NM_005808 AY279532 AY364238	6611	+	TSC_hg19_v1_chr3_+_38032276 BC004300	135221	+	NM_015873	138022	+	BC030198|ITGA9|3680|integrin, alpha 9##D25303|ITGA9|3680|integrin, alpha 9##NM_002207|ITGA9|3680|integrin, alpha 9##L24158|ITGA9|3680|integrin, alpha 9##NM_178339|C3orf35|339883|chromosome 3 open reading frame 35##NM_178342|C3orf35|339883|chromosome 3 open reading frame 35##AJ493604|C3orf35|339883|chromosome 3 open reading frame 35##AJ493603|C3orf35|339883|chromosome 3 open reading frame 35##BC045543|GOLGA4|2803|golgin A4##NM_001172713|GOLGA4|2803|golgin A4##NM_002078|GOLGA4|2803|golgin A4##BC050444|GOLGA4|2803|golgin A4##AK290550|GOLGA4|2803|golgin A4##BC023648|GOLGA4|2803|golgin A4##AK300192|GOLGA4|2803|golgin A4##AK307429|GOLGA4|2803|golgin A4##AB209693|GOLGA4|2803|golgin A4##U41740|GOLGA4|2803|golgin A4##X82834|GOLGA4|2803|golgin A4##AJ575644|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AJ575645|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_001008392|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_005808|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY279532|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY364238|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##BC004300|VILL|50853|villin-like##NM_015873|VILL|50853|villin-like	0.999409	CTCF.p2:1:0.999
chr2	220395003	220395124	reg1002048.p2	15.121	+	BC031812 NM_018674 NM_182847 AK308804 BC010439 DQ892104 CU679713 AK309373	-16055	+	TSC_hg19_v1_chr2_+_220363622 NM_013335 AK000999 NM_205847 AK290671 AK022578 AK222951 AK296193 BC007456	-31282	+	NM_001173476	-69530	+	AK302124 NM_001195731	12755	-	TSC_hg19_v1_chr2_+_220408352 BC068567	13305	+	TSC_hg19_v1_chr2_-_220408499 AB086063 BC023531 AB095813 AY358403 BC021223 NM_024536	13337	-	BC031812|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_018674|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_182847|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK308804|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##BC010439|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##DQ892104|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK309373|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_013335|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK000999|GMPPA|29926|GDP-mannose pyrophosphorylase A##NM_205847|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK290671|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK022578|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK222951|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK296193|GMPPA|29926|GDP-mannose pyrophosphorylase A##BC007456|GMPPA|29926|GDP-mannose pyrophosphorylase A##NM_001173476|SPEG|10290|SPEG complex locus##AK302124|CHPF|79586|chondroitin polymerizing factor##NM_001195731|CHPF|79586|chondroitin polymerizing factor##BC068567|TMEM198|130612|transmembrane protein 198##AB086063|CHPF|79586|chondroitin polymerizing factor##BC023531|CHPF|79586|chondroitin polymerizing factor##AB095813|CHPF|79586|chondroitin polymerizing factor##AY358403|CHPF|79586|chondroitin polymerizing factor##BC021223|CHPF|79586|chondroitin polymerizing factor##NM_024536|CHPF|79586|chondroitin polymerizing factor	0.997267	CTCF.p2:10:0.997
chr4	165701032	165701167	reg1002685.p1	15.121	+	AK289711 NM_001166373	-396693	-	NM_012403	-582237	-	AB463878 AK000675 AK301408 NM_017923	-1166384	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	177003	+	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	177052	+	BC089393 NM_001012414	197718	-	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61	0.347535	CTCF.p2:-9:0.348
chr3	184135759	184135881	reg1003042.p1	15.119	+	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	-37780	+	BC130322 BC136338 BC143982 L33410 NM_000460 NM_001177597 NM_001177598 TSC_hg19_v1_chr3_-_184095936	-39882	-	TSC_hg19_v1_chr3_+_184081196 NM_006232 Z49199 BC000739 AB464044 EU446997	-54591	+	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	143762	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	293943	-	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	394103	+	AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##BC130322|THPO|7066|thrombopoietin##BC136338|THPO|7066|thrombopoietin##BC143982|THPO|7066|thrombopoietin##L33410|THPO|7066|thrombopoietin##NM_000460|THPO|7066|thrombopoietin##NM_001177597|THPO|7066|thrombopoietin##NM_001177598|THPO|7066|thrombopoietin##NM_006232|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##Z49199|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##BC000739|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##EU446997|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3##AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)	0.998817	CTCF.p2:-3:0.999
chr7	72385683	72385816	reg1002786.p1	15.119	+	TSC_hg19_v1_chr7_+_72349925 AB014518 NM_172020	-35814	+	TSC_hg19_v1_chr7_+_72300065 BC010183	-85650	+	AK303225 AK309556 AK301471 BC068520 AK310913 NM_001145440 NM_001145441	-86967	-	TSC_hg19_v1_chr7_+_72395623 AK123814 AB289621	9876	+	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	11125	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	39493	-	AB014518|POM121|9883|POM121 membrane glycoprotein##NM_172020|POM121|9883|POM121 membrane glycoprotein##BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1##AK303225|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK309556|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK301471|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##BC068520|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK310913|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145440|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145441|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK123814|POM121|9883|POM121 membrane glycoprotein##AB289621|POM121|9883|POM121 membrane glycoprotein##AK292548|POM121|9883|POM121 membrane glycoprotein##BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1	0.999541	CTCF.p2:5:1.000
chr12	95511007	95511154	reg1003099.p1	15.118	+	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	-43782	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	-113564	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	-113610	-	TSC_hg19_v1_chr12_-_95611206 BC125225 BC125226 BX538322 AK124904 NM_018351	100156	-	TSC_hg19_v1_chr12_+_95611582 NM_017599 AK001338 AK225303 AK309943 AK225356 BC014443 AK307864 AL137497 BC064939 BC028597	100614	+	TSC_hg19_v1_chr12_+_95676175 AL133113	165138	+	M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein##AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein##AL133113|VEZT|55591|vezatin, adherens junctions transmembrane protein	0.999135	CTCF.p2:-1:0.999
chr1	167026579	167026715	reg1003380.p1	15.116	+	TSC_hg19_v1_chr1_+_166958503 AK302253 AK131066 DQ076156 GU383113 AK027810 NM_032858 BC028595 AB590622 CU688524	-68105	+	TSC_hg19_v1_chr1_+_166944753 GU383114	-81863	+	AB527117 AF503509 NM_199351 TSC_hg19_v1_chr1_-_166944658	-81965	-	CU687006 BC074830 BC074876 TSC_hg19_v1_chr1_-_167059615 BC107164 BC107165 AK312833 BC069705 BC069723 BC069745 BC069761 BC069789 NM_005814 U79725	33048	-	NM_001080426	37439	+	TSC_hg19_v1_chr1_+_167190127 NM_001198786 NM_002697 AK302525 AK303201 AK308004 AK091438 S66901 BC052274 X13403	163410	+	AK302253|MAEL|84944|maelstrom homolog (Drosophila)##AK131066|MAEL|84944|maelstrom homolog (Drosophila)##DQ076156|MAEL|84944|maelstrom homolog (Drosophila)##GU383113|MAEL|84944|maelstrom homolog (Drosophila)##AK027810|MAEL|84944|maelstrom homolog (Drosophila)##NM_032858|MAEL|84944|maelstrom homolog (Drosophila)##BC028595|MAEL|84944|maelstrom homolog (Drosophila)##GU383114|MAEL|84944|maelstrom homolog (Drosophila)##AF503509|ILDR2|387597|immunoglobulin-like domain containing receptor 2##NM_199351|ILDR2|387597|immunoglobulin-like domain containing receptor 2##BC074830|GPA33|10223|glycoprotein A33 (transmembrane)##BC074876|GPA33|10223|glycoprotein A33 (transmembrane)##BC107164|GPA33|10223|glycoprotein A33 (transmembrane)##BC107165|GPA33|10223|glycoprotein A33 (transmembrane)##AK312833|GPA33|10223|glycoprotein A33 (transmembrane)##BC069705|GPA33|10223|glycoprotein A33 (transmembrane)##BC069723|GPA33|10223|glycoprotein A33 (transmembrane)##BC069745|GPA33|10223|glycoprotein A33 (transmembrane)##BC069761|GPA33|10223|glycoprotein A33 (transmembrane)##BC069789|GPA33|10223|glycoprotein A33 (transmembrane)##NM_005814|GPA33|10223|glycoprotein A33 (transmembrane)##U79725|GPA33|10223|glycoprotein A33 (transmembrane)##NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)##NM_001198786|POU2F1|5451|POU class 2 homeobox 1##NM_002697|POU2F1|5451|POU class 2 homeobox 1##AK302525|POU2F1|5451|POU class 2 homeobox 1##AK303201|POU2F1|5451|POU class 2 homeobox 1##AK308004|POU2F1|5451|POU class 2 homeobox 1##AK091438|POU2F1|5451|POU class 2 homeobox 1##BC052274|POU2F1|5451|POU class 2 homeobox 1##X13403|POU2F1|5451|POU class 2 homeobox 1	0.989827	CTCF.p2:18:0.974
chr17	48104313	48104429	reg1002383.p1	15.116	+	BC012361 BC028970 AK075167 TSC_hg19_v1_chr17_-_48072589 AK313257 NM_005220	-31793	-	NM_001934 U73328	-54242	+	U31762 TSC_hg19_v1_chr17_+_48049688	-54688	+	AK293323 AK303384 NM_002204 NM_005501 TSC_hg19_v1_chr17_+_48133350	28970	+	TSC_hg19_v1_chr17_+_48133357 AB209658 BC150190 BC015344	29075	+	AK055119 NM_001199898	67729	+	BC012361|DLX3|1747|distal-less homeobox 3##BC028970|DLX3|1747|distal-less homeobox 3##AK075167|DLX3|1747|distal-less homeobox 3##AK313257|DLX3|1747|distal-less homeobox 3##NM_005220|DLX3|1747|distal-less homeobox 3##NM_001934|DLX4|1748|distal-less homeobox 4##U73328|DLX4|1748|distal-less homeobox 4##U31762|DLX4|1748|distal-less homeobox 4##AK293323|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AK303384|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##NM_002204|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##NM_005501|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AB209658|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC150190|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC015344|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AK055119|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199898|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2	0.983328	CTCF.p2:-2:0.983
chr19	56683354	56683491	reg1002756.p1	15.115	+	AK001999 TSC_hg19_v1_chr19_+_56652694 AB052954 AB052955 BC021282	-30724	+	TSC_hg19_v1_chr19_+_56652664 NM_001253792 NM_018337 AL834130 AK223408	-30817	+	TSC_hg19_v1_chr19_-_56632646 BC012495 BC077728 NM_001002836	-50776	-	AF188492 AF188493 NM_001145546 NM_033106	3966	+	NM_001080456	20998	-	BC002636 NM_024303 AK098700	56246	-	AK001999|ZNF444|55311|zinc finger protein 444##AB052954|ZNF444|55311|zinc finger protein 444##AB052955|ZNF444|55311|zinc finger protein 444##BC021282|ZNF444|55311|zinc finger protein 444##NM_001253792|ZNF444|55311|zinc finger protein 444##NM_018337|ZNF444|55311|zinc finger protein 444##AL834130|ZNF444|55311|zinc finger protein 444##AK223408|ZNF444|55311|zinc finger protein 444##BC012495|ZNF787|126208|zinc finger protein 787##BC077728|ZNF787|126208|zinc finger protein 787##NM_001002836|ZNF787|126208|zinc finger protein 787##AF188492|GALP|85569|galanin-like peptide##AF188493|GALP|85569|galanin-like peptide##NM_001145546|GALP|85569|galanin-like peptide##NM_033106|GALP|85569|galanin-like peptide##NM_001080456|ZSCAN5B|342933|zinc finger and SCAN domain containing 5B##BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A	0.791203	CTCF.p2:18:0.791
chr2	238330303	238330431	reg1003230.p1	15.113	+	TSC_hg19_v1_chr2_-_238322840 NM_004369 NM_057164 NM_057165 NM_057166 NM_057167	-7523	-	TSC_hg19_v1_chr2_-_238322815 X52022	-7546	-	AK303290 TSC_hg19_v1_chr2_-_238322814	-7553	-	TSC_hg19_v1_chr2_+_238395893 NM_001042467 NM_024101 AK296745 AK022207 AK292929 AK310821 AK225381 BC001653 BC051269	65529	+	AB015419 BC069081 BC069284 NM_015893	144849	+	TSC_hg19_v1_chr2_-_238499327 BC009827 BC050426 AL136645	168979	-	NM_004369|COL6A3|1293|collagen, type VI, alpha 3##NM_057164|COL6A3|1293|collagen, type VI, alpha 3##NM_057165|COL6A3|1293|collagen, type VI, alpha 3##NM_057166|COL6A3|1293|collagen, type VI, alpha 3##NM_057167|COL6A3|1293|collagen, type VI, alpha 3##X52022|COL6A3|1293|collagen, type VI, alpha 3##AK303290|COL6A3|1293|collagen, type VI, alpha 3##NM_001042467|MLPH|79083|melanophilin##NM_024101|MLPH|79083|melanophilin##AK296745|MLPH|79083|melanophilin##AK022207|MLPH|79083|melanophilin##AK292929|MLPH|79083|melanophilin##AK310821|MLPH|79083|melanophilin##AK225381|MLPH|79083|melanophilin##BC001653|MLPH|79083|melanophilin##BC051269|MLPH|79083|melanophilin##AB015419|PRLH|51052|prolactin releasing hormone##BC069081|PRLH|51052|prolactin releasing hormone##BC069284|PRLH|51052|prolactin releasing hormone##NM_015893|PRLH|51052|prolactin releasing hormone##BC009827|RAB17|64284|RAB17, member RAS oncogene family##BC050426|RAB17|64284|RAB17, member RAS oncogene family##AL136645|RAB17|64284|RAB17, member RAS oncogene family	1.002113	CTCF.p2:-8:0.991
chr3	46951125	46951278	reg1002724.p1	15.113	+	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	-27459	+	BC112221 BC112247 NM_000316 U17418 X68596	-31952	+	AF174483 CU679491 X07373 M24122 AK312044 BC009790 NM_000258	-46276	-	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	67044	-	TSC_hg19_v1_chr3_+_47021155 NM_015175 AK131104 AB384492	70046	+	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	78269	+	BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor##BC112221|PTH1R|5745|parathyroid hormone 1 receptor##BC112247|PTH1R|5745|parathyroid hormone 1 receptor##NM_000316|PTH1R|5745|parathyroid hormone 1 receptor##U17418|PTH1R|5745|parathyroid hormone 1 receptor##X68596|PTH1R|5745|parathyroid hormone 1 receptor##AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12##NM_015175|NBEAL2|23218|neurobeachin-like 2##AK131104|NBEAL2|23218|neurobeachin-like 2##AK092871|NBEAL2|23218|neurobeachin-like 2	0.996983	CTCF.p2:12:0.997
chr9	87312576	87312701	reg1002138.p1	15.113	+	U12140 TSC_hg19_v1_chr9_+_87285349	-27306	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-27886	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-27942	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	1044233	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	1243436	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	1243540	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.99012	CTCF.p2:-15:0.990
chr2	47995132	47995276	reg1002587.p1	15.112	+	TSC_hg19_v1_chr2_-_47918421 D28393	-76785	-	AF287302 NM_022055 BC047749	-197721	-	TSC_hg19_v1_chr2_+_47630294 AK223284 AK296831 AK297763 BX649122 BC021566 AK311330 DQ892558 DQ895772 AB489153 BC001122 U03911 CU692370 DQ648894	-364887	+	BC071594 NM_000179 TSC_hg19_v1_chr2_+_48010283 U28946 D89646 BC104665 U54777 BC004246 AK293921 AK308392 AB590153 DQ892898	15092	+	AK304140 AK315108 NM_025133	120647	-	BC130445 BC136480 AK292877 AF176706 AF174599 AK223592 BC043258 AY827075 TSC_hg19_v1_chr2_-_48132864 AK297444 NM_001190274	137589	-	D28393|RPL18A|6142|ribosomal protein L18a##AF287302|KCNK12|56660|potassium channel, subfamily K, member 12##NM_022055|KCNK12|56660|potassium channel, subfamily K, member 12##BC047749|KCNK12|56660|potassium channel, subfamily K, member 12##AK223284|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK296831|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK297763|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BX649122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC021566|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK311330|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ892558|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ895772|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC001122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U03911|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ648894|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC071594|MSH6|2956|mutS homolog 6 (E. coli)##NM_000179|MSH6|2956|mutS homolog 6 (E. coli)##U28946|MSH6|2956|mutS homolog 6 (E. coli)##D89646|MSH6|2956|mutS homolog 6 (E. coli)##BC104665|MSH6|2956|mutS homolog 6 (E. coli)##U54777|MSH6|2956|mutS homolog 6 (E. coli)##BC004246|MSH6|2956|mutS homolog 6 (E. coli)##AK293921|MSH6|2956|mutS homolog 6 (E. coli)##AK308392|MSH6|2956|mutS homolog 6 (E. coli)##DQ892898|MSH6|2956|mutS homolog 6 (E. coli)##AK304140|FBXO11|80204|F-box protein 11##AK315108|FBXO11|80204|F-box protein 11##NM_025133|FBXO11|80204|F-box protein 11##BC130445|FBXO11|80204|F-box protein 11##BC136480|FBXO11|80204|F-box protein 11##AK292877|FBXO11|80204|F-box protein 11##AF176706|FBXO11|80204|F-box protein 11##AF174599|FBXO11|80204|F-box protein 11##AK223592|FBXO11|80204|F-box protein 11##BC043258|FBXO11|80204|F-box protein 11##AY827075|FBXO11|80204|F-box protein 11##AK297444|FBXO11|80204|F-box protein 11##NM_001190274|FBXO11|80204|F-box protein 11	0.999942	CTCF.p2:16:1.000
chr2	45870928	45871046	reg1001724.p1	15.110	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-32580	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-75859	-	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	-634437	-	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	8087	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	653604	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	653988	+	AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1	0.999628	CTCF.p2:-14:1.000
chr7	2286904	2287030	reg1014318.p1	15.109	+	BC065367 AB025238 AB025239 AB025242 NM_198953 NM_198954 BC022818 BC040144 CU677071	-4434	+	AB025233 NM_002452 NM_198948 NM_198949 BC051375 AB025234 AB025235 AB025240 BC014618 AK026631 AB025236 AB025237 AB025241 NM_198950 NM_198952	-5092	+	TSC_hg19_v1_chr7_-_2281824 BC017181 AF093415 NM_013393 AK302060	-5134	-	TSC_hg19_v1_chr7_-_2354018 BC007785	67057	-	TSC_hg19_v1_chr7_-_2354077 CU692368 DQ892508 DQ895722 AK074544 AF121858 AK315670 BC021565 NM_013321	67107	-	TSC_hg19_v1_chr7_+_2394488 NM_001037283 NM_003751 AK302058	107495	+	BC065367|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025238|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025239|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025242|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198953|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198954|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC022818|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC040144|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025233|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_002452|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198948|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198949|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC051375|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025234|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025235|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025240|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC014618|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AK026631|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025236|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025237|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025241|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198950|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198952|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC017181|FTSJ2|29960|FtsJ homolog 2 (E. coli)##AF093415|FTSJ2|29960|FtsJ homolog 2 (E. coli)##NM_013393|FTSJ2|29960|FtsJ homolog 2 (E. coli)##AK302060|FTSJ2|29960|FtsJ homolog 2 (E. coli)##BC007785|SNX8|29886|sorting nexin 8##DQ892508|SNX8|29886|sorting nexin 8##DQ895722|SNX8|29886|sorting nexin 8##AK074544|SNX8|29886|sorting nexin 8##AF121858|SNX8|29886|sorting nexin 8##AK315670|SNX8|29886|sorting nexin 8##BC021565|SNX8|29886|sorting nexin 8##NM_013321|SNX8|29886|sorting nexin 8##NM_001037283|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##NM_003751|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##AK302058|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B	0.985252	CTCF.p2:0:0.985
chrX	118252899	118253042	reg1003363.p1	15.107	+	TSC_hg19_v1_chrX_+_118109314 AK026265	-143632	+	TSC_hg19_v1_chrX_+_118108607 BC098283 BC099847 BC100671 BC103491 NM_001031855 NM_024778	-144317	+	TSC_hg19_v1_chrX_+_118108580 AK091777 AK290198 AX747177	-144390	+	NM_020721	31571	-	TSC_hg19_v1_chrX_+_118370247 NM_006667 AK313956 Y12711 BC034238 AK293618 DQ891774 DQ894958 CR456993	117295	+	NM_145305 TSC_hg19_v1_chrX_+_118533308 AK094254 BC071871	280317	+	AK026265|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC098283|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC099847|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC100671|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC103491|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_001031855|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_024778|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK091777|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK290198|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_020721|KIAA1210|57481|KIAA1210##NM_006667|PGRMC1|10857|progesterone receptor membrane component 1##AK313956|PGRMC1|10857|progesterone receptor membrane component 1##Y12711|PGRMC1|10857|progesterone receptor membrane component 1##BC034238|PGRMC1|10857|progesterone receptor membrane component 1##AK293618|PGRMC1|10857|progesterone receptor membrane component 1##DQ891774|PGRMC1|10857|progesterone receptor membrane component 1##DQ894958|PGRMC1|10857|progesterone receptor membrane component 1##CR456993|PGRMC1|10857|progesterone receptor membrane component 1##NM_145305|SLC25A43|203427|solute carrier family 25, member 43##AK094254|SLC25A43|203427|solute carrier family 25, member 43##BC071871|SLC25A43|203427|solute carrier family 25, member 43	0.016369	
chr15	67596235	67596349	reg1001553.p2	15.106	+	TSC_hg19_v1_chr15_+_67547171 BC039463 NM_001031715 NM_022784 AY014282 AK292478 AK304303 BC031041 BC048964 BC039292 AK022538 CU690588	-49118	+	AB528136 AM393020 AM393411 CR533540 CU691322 TSC_hg19_v1_chr15_-_67547000 AK021568 AL136715 BC058886 BC047026 BC035852 NM_024666	-49272	-	NM_001145104 AK300614 AK301348	-137796	+	TSC_hg19_v1_chr15_+_67813533 NM_001143936 AK294012 AY726587	217255	+	TSC_hg19_v1_chr15_-_67814131 BC047537	217864	-	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	238730	+	BC039463|IQCH|64799|IQ motif containing H##NM_001031715|IQCH|64799|IQ motif containing H##NM_022784|IQCH|64799|IQ motif containing H##AY014282|IQCH|64799|IQ motif containing H##AK292478|IQCH|64799|IQ motif containing H##AK304303|IQCH|64799|IQ motif containing H##BC031041|IQCH|64799|IQ motif containing H##BC048964|IQCH|64799|IQ motif containing H##BC039292|IQCH|64799|IQ motif containing H##AK022538|IQCH|64799|IQ motif containing H##AM393020|AAGAB|79719|alpha- and gamma-adaptin binding protein##AM393411|AAGAB|79719|alpha- and gamma-adaptin binding protein##CR533540|AAGAB|79719|alpha- and gamma-adaptin binding protein##AK021568|AAGAB|79719|alpha- and gamma-adaptin binding protein##AL136715|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC058886|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC047026|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC035852|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_024666|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3##NM_001143936|C15orf61|145853|chromosome 15 open reading frame 61##AK294012|C15orf61|145853|chromosome 15 open reading frame 61##AY726587|C15orf61|145853|chromosome 15 open reading frame 61##BC047537|LOC100506686|100506686|uncharacterized LOC100506686##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5	0.0	
chr19	12170437	12170582	reg1001311.p1	15.106	+	NM_001080404	-6728	-	TSC_hg19_v1_chr19_-_12146530 AK098300 NM_001080411	-23968	-	TSC_hg19_v1_chr19_-_12146492 AK129553 BC047412	-24020	-	AK299732 AL832297 AK098117 NM_001136501 BC125185 BC125186 TSC_hg19_v1_chr19_+_12175767	5131	+	AK128700 TSC_hg19_v1_chr19_+_12203111 AK124155	32604	+	AL080125 AK023094 BC036714 TSC_hg19_v1_chr19_-_12251166 NM_001203250 NM_021143	80647	-	NM_001080404|ZNF878|729747|zinc finger protein 878##AK098300|ZNF433|163059|zinc finger protein 433##NM_001080411|ZNF433|163059|zinc finger protein 433##BC047412|ZNF433|163059|zinc finger protein 433##AK299732|ZNF844|284391|zinc finger protein 844##AL832297|ZNF844|284391|zinc finger protein 844##AK098117|ZNF844|284391|zinc finger protein 844##NM_001136501|ZNF844|284391|zinc finger protein 844##BC125185|ZNF844|284391|zinc finger protein 844##BC125186|ZNF844|284391|zinc finger protein 844##AK128700|ZNF788|388507|zinc finger family member 788##AL080125|ZNF20|7568|zinc finger protein 20##AK023094|ZNF20|7568|zinc finger protein 20##BC036714|ZNF20|7568|zinc finger protein 20##NM_001203250|ZNF20|7568|zinc finger protein 20##NM_021143|ZNF20|7568|zinc finger protein 20	1.947034	CTCF.p2:-51:0.998	CTCF.p2:62:0.949
chr5	431163	431299	reg1002741.p1	15.106	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-126941	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-159426	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-159463	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	11999	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	12119	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	41881	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.837632	CTCF.p2:15:0.838
chr21	44344067	44344194	reg1001473.p1	15.105	+	TSC_hg19_v1_chr21_+_44313422 NM_001001503 NM_021075 BC054016 BC021217 AK308228 AK289586 BC033766 CU676876 CU689730 CR542174 CR542190	-30729	+	TSC_hg19_v1_chr21_-_44299690 BC001074 NM_018669 NM_033661 AK298015	-44446	-	AB590172 CU675357 DQ892967 DQ896215 TSC_hg19_v1_chr21_-_44299643 AK292923 AK315008 AJ243912 AJ243913 BC006341	-44506	-	TSC_hg19_v1_chr21_+_44394671 AY142115 AY196965 NM_004571 BC000735	50524	+	TSC_hg19_v1_chr21_+_44394747 Y13613 AK294794 AK222892 U68727	50609	+	TSC_hg19_v1_chr21_-_44495940 BC000440 X82166 BC011381 AK313691 L14577 BC010242 NM_000071	151836	-	NM_001001503|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##NM_021075|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC054016|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC021217|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK308228|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK289586|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC033766|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542174|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542190|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC001074|WDR4|10785|WD repeat domain 4##NM_018669|WDR4|10785|WD repeat domain 4##NM_033661|WDR4|10785|WD repeat domain 4##AK298015|WDR4|10785|WD repeat domain 4##DQ892967|WDR4|10785|WD repeat domain 4##DQ896215|WDR4|10785|WD repeat domain 4##AK292923|WDR4|10785|WD repeat domain 4##AK315008|WDR4|10785|WD repeat domain 4##AJ243912|WDR4|10785|WD repeat domain 4##AJ243913|WDR4|10785|WD repeat domain 4##BC006341|WDR4|10785|WD repeat domain 4##AY142115|PKNOX1|5316|PBX/knotted 1 homeobox 1##AY196965|PKNOX1|5316|PBX/knotted 1 homeobox 1##NM_004571|PKNOX1|5316|PBX/knotted 1 homeobox 1##BC000735|PKNOX1|5316|PBX/knotted 1 homeobox 1##Y13613|PKNOX1|5316|PBX/knotted 1 homeobox 1##AK294794|PKNOX1|5316|PBX/knotted 1 homeobox 1##AK222892|PKNOX1|5316|PBX/knotted 1 homeobox 1##U68727|PKNOX1|5316|PBX/knotted 1 homeobox 1##BC000440|CBS|875|cystathionine-beta-synthase##X82166|CBS|875|cystathionine-beta-synthase##BC011381|CBS|875|cystathionine-beta-synthase##AK313691|CBS|875|cystathionine-beta-synthase##L14577|CBS|875|cystathionine-beta-synthase##BC010242|CBS|875|cystathionine-beta-synthase##NM_000071|CBS|875|cystathionine-beta-synthase	0.043202	
chr22	33915393	33915531	reg1002448.p1	15.105	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-461107	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-512736	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-717710	+	AJ007583 AB011181 NM_004737 NM_133642	400908	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1546687	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1738014	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.993319	CTCF.p2:-29:0.993
chr5	176541023	176541147	reg1002027.p1	15.102	+	NM_022963 X57205 AF202063 EU826602 AF359241 AB590389 DQ893458 DQ896348 EU826603 JN007471 JN007472 JN007473 JN007474 JN007475 JN007476 JN007477 JN007478 JN007479 JN007480 JN007481 JN007482	-24509	+	TSC_hg19_v1_chr5_+_176513910 BC011847 AK301169 AK225280 AK225909 NM_002011 NM_213647 L03840	-27203	+	AK297448 AK297584 NM_012279 TSC_hg19_v1_chr5_+_176449708 AK295549 AF083340 AK026627 AK300065 BC007775 AL359576 CR749692 AK131469 AK300738 AB463365 AM392799 AM393768	-91366	+	TSC_hg19_v1_chr5_+_176560037 AK126591	18945	+	TSC_hg19_v1_chr5_+_176560056 NM_172349	18982	+	TSC_hg19_v1_chr5_+_176560773 BC021961 NM_022455	19657	+	NM_022963|FGFR4|2264|fibroblast growth factor receptor 4##X57205|FGFR4|2264|fibroblast growth factor receptor 4##AF202063|FGFR4|2264|fibroblast growth factor receptor 4##EU826602|FGFR4|2264|fibroblast growth factor receptor 4##AF359241|FGFR4|2264|fibroblast growth factor receptor 4##DQ893458|FGFR4|2264|fibroblast growth factor receptor 4##DQ896348|FGFR4|2264|fibroblast growth factor receptor 4##EU826603|FGFR4|2264|fibroblast growth factor receptor 4##BC011847|FGFR4|2264|fibroblast growth factor receptor 4##AK301169|FGFR4|2264|fibroblast growth factor receptor 4##AK225280|FGFR4|2264|fibroblast growth factor receptor 4##AK225909|FGFR4|2264|fibroblast growth factor receptor 4##NM_002011|FGFR4|2264|fibroblast growth factor receptor 4##NM_213647|FGFR4|2264|fibroblast growth factor receptor 4##L03840|FGFR4|2264|fibroblast growth factor receptor 4##AK297448|ZNF346|23567|zinc finger protein 346##NM_012279|ZNF346|23567|zinc finger protein 346##AK295549|ZNF346|23567|zinc finger protein 346##AF083340|ZNF346|23567|zinc finger protein 346##AK026627|ZNF346|23567|zinc finger protein 346##AK300065|ZNF346|23567|zinc finger protein 346##BC007775|ZNF346|23567|zinc finger protein 346##AL359576|ZNF346|23567|zinc finger protein 346##CR749692|ZNF346|23567|zinc finger protein 346##AK131469|ZNF346|23567|zinc finger protein 346##AK300738|ZNF346|23567|zinc finger protein 346##AM392799|ZNF346|23567|zinc finger protein 346##AM393768|ZNF346|23567|zinc finger protein 346##AK126591|NSD1|64324|nuclear receptor binding SET domain protein 1##NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1##BC021961|NSD1|64324|nuclear receptor binding SET domain protein 1##NM_022455|NSD1|64324|nuclear receptor binding SET domain protein 1	0.0	
chr6	159112489	159112617	reg1002771.p1	15.102	+	TSC_hg19_v1_chr6_+_159071070 NM_001009991 NM_001242384 NM_001242394 NM_001242395 AK092729 AK298712 AX747692 BC085612	-41499	+	AB590427 CR456931 DQ892606 DQ892607 DQ895846 DQ895847 EU862237 U56255 TSC_hg19_v1_chr6_-_159065772 D50663 BC105588 BC029412 AK315601 NM_006519	-46779	-	BC033450 TSC_hg19_v1_chr6_+_158957752	-154851	+	J05021 X51521 TSC_hg19_v1_chr6_-_159239246	126669	-	TSC_hg19_v1_chr6_-_159239264 BC013903 AK299456 BC068458	126706	-	TSC_hg19_v1_chr6_-_159239276 NM_003379	126752	-	NM_001009991|SYTL3|94120|synaptotagmin-like 3##NM_001242384|SYTL3|94120|synaptotagmin-like 3##NM_001242394|SYTL3|94120|synaptotagmin-like 3##NM_001242395|SYTL3|94120|synaptotagmin-like 3##AK092729|SYTL3|94120|synaptotagmin-like 3##AK298712|SYTL3|94120|synaptotagmin-like 3##BC085612|SYTL3|94120|synaptotagmin-like 3##CR456931|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892606|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892607|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895846|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895847|DYNLT1|6993|dynein, light chain, Tctex-type 1##EU862237|DYNLT1|6993|dynein, light chain, Tctex-type 1##U56255|DYNLT1|6993|dynein, light chain, Tctex-type 1##D50663|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC105588|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC029412|DYNLT1|6993|dynein, light chain, Tctex-type 1##AK315601|DYNLT1|6993|dynein, light chain, Tctex-type 1##NM_006519|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC033450|TMEM181|57583|transmembrane protein 181##J05021|EZR|7430|ezrin##X51521|EZR|7430|ezrin##BC013903|EZR|7430|ezrin##AK299456|EZR|7430|ezrin##BC068458|EZR|7430|ezrin##NM_003379|EZR|7430|ezrin	0.946167	CTCF.p2:12:0.946
chr5	149815736	149815875	reg1002813.p1	15.101	+	TSC_hg19_v1_chr5_-_149792474 NM_001025158 NM_001025159 NM_004355	-23355	-	TSC_hg19_v1_chr5_-_149792349 M28589	-23459	-	TSC_hg19_v1_chr5_-_149792315 AB590276 BT019505 CU676294 DQ892005 DQ895194 AK292076 AK297889 AK300669 AK308929 M28588 X00497 BC018726 BC024272	-23502	-	TSC_hg19_v1_chr5_-_149829249 BC020515	13439	-	TSC_hg19_v1_chr5_-_149829301 BC003401 BC001126 BC006784 BC110792 AK312179 BC091474 NM_001025070 NM_001025071 NM_005617	13486	-	TSC_hg19_v1_chr5_+_149865341 AB209107	49634	+	NM_001025158|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##NM_001025159|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##NM_004355|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##BT019505|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##DQ892005|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##DQ895194|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AK292076|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AK297889|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AK300669|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AK308929|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##M28588|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##X00497|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##BC018726|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##BC024272|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##BC020515|RPS14|6208|ribosomal protein S14##BC003401|RPS14|6208|ribosomal protein S14##BC001126|RPS14|6208|ribosomal protein S14##BC006784|RPS14|6208|ribosomal protein S14##BC110792|RPS14|6208|ribosomal protein S14##AK312179|RPS14|6208|ribosomal protein S14##BC091474|RPS14|6208|ribosomal protein S14##NM_001025070|RPS14|6208|ribosomal protein S14##NM_001025071|RPS14|6208|ribosomal protein S14##NM_005617|RPS14|6208|ribosomal protein S14##AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	0.999962	CTCF.p2:12:1.000
chr2	113699431	113699564	reg1002964.p1	15.100	+	AF201832 NM_173205	-26728	+	AF167368 AF200496 NM_014439 NM_173202 NM_173203 NM_173204 BC020637 AB451333 AB451478 AB590279 AF251119 AF251120 AY071840 AY071841 CU676594 DQ891388	-28929	+	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	-105153	-	AY359111 AF200492 NM_019618 AF206696	36104	+	AF201831 BC107042 BC107043 NM_014440 AB590979	64001	+	NM_014438 NM_173178 AF200494 AF201833	110944	-	AF201832|IL37|27178|interleukin 37##NM_173205|IL37|27178|interleukin 37##AF167368|IL37|27178|interleukin 37##AF200496|IL37|27178|interleukin 37##NM_014439|IL37|27178|interleukin 37##NM_173202|IL37|27178|interleukin 37##NM_173203|IL37|27178|interleukin 37##NM_173204|IL37|27178|interleukin 37##BC020637|IL37|27178|interleukin 37##AB451333|IL37|27178|interleukin 37##AB451478|IL37|27178|interleukin 37##AF251119|IL37|27178|interleukin 37##AF251120|IL37|27178|interleukin 37##AY071840|IL37|27178|interleukin 37##AY071841|IL37|27178|interleukin 37##DQ891388|IL37|27178|interleukin 37##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta##AY359111|IL36G|56300|interleukin 36, gamma##AF200492|IL36G|56300|interleukin 36, gamma##NM_019618|IL36G|56300|interleukin 36, gamma##AF206696|IL36G|56300|interleukin 36, gamma##AF201831|IL36A|27179|interleukin 36, alpha##BC107042|IL36A|27179|interleukin 36, alpha##BC107043|IL36A|27179|interleukin 36, alpha##NM_014440|IL36A|27179|interleukin 36, alpha##NM_014438|IL36B|27177|interleukin 36, beta##NM_173178|IL36B|27177|interleukin 36, beta##AF200494|IL36B|27177|interleukin 36, beta##AF201833|IL36B|27177|interleukin 36, beta	0.998844	CTCF.p2:14:0.999
chr2	38059842	38059981	reg1002908.p1	15.100	+	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	-160522	-	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	-161132	-	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-488098	+	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	92521	+	BC024243 NM_001170792	95990	+	NM_001170793 NM_144713 AK057516 AF435956	117689	+	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1##BC024243|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1	0.99124	CTCF.p2:12:0.991
chr19	7864543	7864688	reg1003080.p1	15.097	+	NM_001144904 NM_001144905 NM_001144906 NM_001144907 NM_001144908 NM_001144909 NM_001144910 NM_001144911 NM_014257 AK292278 BC038851 AF290887 AK304499 AK314704 AB015629 AF245219 AK298084 AK023750 BC110614 AY343913 DQ893779 AY042234 AY042235 AY042236 AY042237 AY042238 AY042239 AY042240	-36522	+	AY042221 AY042222 AY042223 AY042224 AY042225 AY042226 AY042227 AY042228 AY042229 AY042230 AY042231 AY042232 AY042233 AB527563 BC110615 AF290886 AK293089 TSC_hg19_v1_chr19_-_7812421 M98457 AK304190 AK313585 NM_001144893 NM_001144894 NM_001144895 NM_001144896 NM_001144897 NM_001144899 NM_021155	-52186	-	AY203939 BC093691 BC093693 BC143309 AY423706 NM_001244856 NM_198492	-67599	-	TSC_hg19_v1_chr19_+_7895113 NM_145245 BC014111	30561	+	NM_001159944 AB449874	46791	+	AL442075 TSC_hg19_v1_chr19_-_7934829	70202	-	NM_001144904|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144905|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144906|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144907|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144908|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144909|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144910|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144911|CLEC4M|10332|C-type lectin domain family 4, member M##NM_014257|CLEC4M|10332|C-type lectin domain family 4, member M##AK292278|CLEC4M|10332|C-type lectin domain family 4, member M##BC038851|CLEC4M|10332|C-type lectin domain family 4, member M##AF290887|CLEC4M|10332|C-type lectin domain family 4, member M##AK304499|CLEC4M|10332|C-type lectin domain family 4, member M##AK314704|CLEC4M|10332|C-type lectin domain family 4, member M##AB015629|CLEC4M|10332|C-type lectin domain family 4, member M##AF245219|CLEC4M|10332|C-type lectin domain family 4, member M##AK298084|CLEC4M|10332|C-type lectin domain family 4, member M##AK023750|CLEC4M|10332|C-type lectin domain family 4, member M##BC110614|CLEC4M|10332|C-type lectin domain family 4, member M##AY343913|CLEC4M|10332|C-type lectin domain family 4, member M##DQ893779|CLEC4M|10332|C-type lectin domain family 4, member M##AY042234|CLEC4M|10332|C-type lectin domain family 4, member M##AY042235|CLEC4M|10332|C-type lectin domain family 4, member M##AY042236|CLEC4M|10332|C-type lectin domain family 4, member M##AY042237|CLEC4M|10332|C-type lectin domain family 4, member M##AY042238|CLEC4M|10332|C-type lectin domain family 4, member M##AY042239|CLEC4M|10332|C-type lectin domain family 4, member M##AY042240|CLEC4M|10332|C-type lectin domain family 4, member M##AY042221|CD209|30835|CD209 molecule##AY042222|CD209|30835|CD209 molecule##AY042223|CD209|30835|CD209 molecule##AY042224|CD209|30835|CD209 molecule##AY042225|CD209|30835|CD209 molecule##AY042226|CD209|30835|CD209 molecule##AY042227|CD209|30835|CD209 molecule##AY042228|CD209|30835|CD209 molecule##AY042229|CD209|30835|CD209 molecule##AY042230|CD209|30835|CD209 molecule##AY042231|CD209|30835|CD209 molecule##AY042232|CD209|30835|CD209 molecule##AY042233|CD209|30835|CD209 molecule##BC110615|CD209|30835|CD209 molecule##AF290886|CD209|30835|CD209 molecule##AK293089|CD209|30835|CD209 molecule##M98457|CD209|30835|CD209 molecule##AK304190|CD209|30835|CD209 molecule##AK313585|CD209|30835|CD209 molecule##NM_001144893|CD209|30835|CD209 molecule##NM_001144894|CD209|30835|CD209 molecule##NM_001144895|CD209|30835|CD209 molecule##NM_001144896|CD209|30835|CD209 molecule##NM_001144897|CD209|30835|CD209 molecule##NM_001144899|CD209|30835|CD209 molecule##NM_021155|CD209|30835|CD209 molecule##AY203939|CLEC4G|339390|C-type lectin domain family 4, member G##BC093691|CLEC4G|339390|C-type lectin domain family 4, member G##BC093693|CLEC4G|339390|C-type lectin domain family 4, member G##BC143309|CLEC4G|339390|C-type lectin domain family 4, member G##AY423706|CLEC4G|339390|C-type lectin domain family 4, member G##NM_001244856|CLEC4G|339390|C-type lectin domain family 4, member G##NM_198492|CLEC4G|339390|C-type lectin domain family 4, member G##NM_145245|EVI5L|115704|ecotropic viral integration site 5-like##BC014111|EVI5L|115704|ecotropic viral integration site 5-like##NM_001159944|EVI5L|115704|ecotropic viral integration site 5-like##AB449874|EVI5L|115704|ecotropic viral integration site 5-like##AL442075|FLJ22184|80164|putative uncharacterized protein FLJ22184	0.368029	CTCF.p2:29:0.368
chr22	24191827	24191954	reg1002056.p2	15.097	+	AB528119 CU013077 CU013365 CU691264 TSC_hg19_v1_chr22_-_24181194 AK096976 AK125830 BC057830 CR456372 AL389876 NM_001002862 NM_001135751 NM_198440	-10705	-	TSC_hg19_v1_chr22_+_24129164 AK024025 NM_001007468 NM_003073 AK303620 AK021419 AK299411 AJ011737 AJ011738 U04847 BC117114 BC143667 CR456581 AL389878 AB463295 CU013180 CU013468 HQ258224 AB017523	-62641	+	AK075448 AK129792 NM_005940 X57766 BC057788	-76845	+	AF443201 AJ271290 NM_001024938 NM_030807 AK314502 AK315937 AK075467 AK296169 AK308602 BC063525 BC100807 BC100808 BC100809 BC100810 AK300196 TSC_hg19_v1_chr22_+_24199338	7308	+	NM_001024939 TSC_hg19_v1_chr22_+_24200061 AK304409 AK308589 AK316049 CR456373 AB463269 CU013078 CU013366	8223	+	TSC_hg19_v1_chr22_+_24236567 BC022414 NM_002415 BC013976	44671	+	CU013077|DERL3|91319|Der1-like domain family, member 3##CU013365|DERL3|91319|Der1-like domain family, member 3##AK096976|DERL3|91319|Der1-like domain family, member 3##AK125830|DERL3|91319|Der1-like domain family, member 3##BC057830|DERL3|91319|Der1-like domain family, member 3##CR456372|DERL3|91319|Der1-like domain family, member 3##AL389876|DERL3|91319|Der1-like domain family, member 3##NM_001002862|DERL3|91319|Der1-like domain family, member 3##NM_001135751|DERL3|91319|Der1-like domain family, member 3##NM_198440|DERL3|91319|Der1-like domain family, member 3##AK024025|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##NM_001007468|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##NM_003073|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK303620|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK021419|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK299411|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AJ011737|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AJ011738|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##BC117114|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##BC143667|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CR456581|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AL389878|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CU013180|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CU013468|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##HQ258224|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AB017523|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK075448|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##AK129792|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##NM_005940|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##X57766|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##BC057788|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##AF443201|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AJ271290|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##NM_001024938|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##NM_030807|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK314502|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK315937|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK075467|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK296169|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK308602|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC063525|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC100807|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC100808|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC100809|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC100810|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK300196|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##NM_001024939|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK304409|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK308589|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK316049|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##CR456373|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##CU013078|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##CU013366|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC022414|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##NM_002415|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC013976|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)	0.836355	CTCF.p2:8:0.836
chr19	51976313	51976446	reg1003309.p1	15.096	+	AF310234 AK290412 AF195092 AF223403 BC053319 AK290149 AK295589 NM_014442	-14702	-	TSC_hg19_v1_chr19_-_51920897 AK289900 AF310233 AY358337 AK290542 AK294185 AK303514 AK303717 BC101725 BC143497 BC143500 AF301007 AK292025 AK308982 AY032685 AF311905 NM_001171156 NM_001171157 NM_001171158 NM_001171159 NM_001171160 NM_001171161 NM_033130	-55431	-	TSC_hg19_v1_chr19_-_51893838 BC085012 BC143997 BC043532 NM_001193623	-82554	-	NM_001080405	3458	+	NM_033329	27267	-	CU690206 AY358140 AF282256 AK225931 BC035809 AK095919 NM_053003 TSC_hg19_v1_chr19_-_52005055	28650	-	AF310234|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290412|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF195092|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF223403|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##BC053319|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290149|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK295589|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_014442|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK289900|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF310233|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY358337|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK290542|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK294185|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303514|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303717|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC101725|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143497|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143500|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF301007|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK292025|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK308982|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY032685|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF311905|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171156|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171157|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171158|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171159|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171160|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171161|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_033130|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC085012|LOC147646|147646|uncharacterized LOC147646##BC043532|LOC147646|147646|uncharacterized LOC147646##NM_001193623|LOC147646|147646|uncharacterized LOC147646##NM_001080405|CEACAM18|729767|carcinoembryonic antigen-related cell adhesion molecule 18##NM_033329|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AY358140|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AF282256|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AK225931|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##BC035809|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AK095919|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##NM_053003|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)	1.017894	CTCF.p2:-9:0.997
chr10	126228846	126228970	reg1002538.p1	15.095	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-78487	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-90331	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-121390	-	D50930 TSC_hg19_v1_chr10_-_126432660	203736	-	TSC_hg19_v1_chr10_-_126432823 BC031654	203908	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	204003	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.999559	CTCF.p2:-14:1.000
chr1	226384797	226384924	reg1003532.p1	15.095	+	AY150218 TSC_hg19_v1_chr1_-_226374401 BC045533 BC060792 NM_022735 AK025520 AK314468 AB043587	-10443	-	BC039575 TSC_hg19_v1_chr1_-_226374400	-10460	-	TSC_hg19_v1_chr1_+_226271319 BC032899	-113500	+	BC111974 BC113441 BC143784 TSC_hg19_v1_chr1_+_226411364 AF211891 NM_031944	26490	+	TSC_hg19_v1_chr1_-_226496839 AY786184 BC043444 BX537869 AK126177 AF190323 AF190324 AK308823	112036	-	BC045625 NM_173083	112337	-	AY150218|ACBD3|64746|acyl-CoA binding domain containing 3##BC045533|ACBD3|64746|acyl-CoA binding domain containing 3##BC060792|ACBD3|64746|acyl-CoA binding domain containing 3##NM_022735|ACBD3|64746|acyl-CoA binding domain containing 3##AK025520|ACBD3|64746|acyl-CoA binding domain containing 3##AK314468|ACBD3|64746|acyl-CoA binding domain containing 3##AB043587|ACBD3|64746|acyl-CoA binding domain containing 3##BC039575|ACBD3|64746|acyl-CoA binding domain containing 3##BC111974|MIXL1|83881|Mix paired-like homeobox##BC113441|MIXL1|83881|Mix paired-like homeobox##BC143784|MIXL1|83881|Mix paired-like homeobox##AF211891|MIXL1|83881|Mix paired-like homeobox##NM_031944|MIXL1|83881|Mix paired-like homeobox##AY786184|LIN9|286826|lin-9 homolog (C. elegans)##BC043444|LIN9|286826|lin-9 homolog (C. elegans)##BX537869|LIN9|286826|lin-9 homolog (C. elegans)##AK126177|LIN9|286826|lin-9 homolog (C. elegans)##AF190323|LIN9|286826|lin-9 homolog (C. elegans)##AF190324|LIN9|286826|lin-9 homolog (C. elegans)##AK308823|LIN9|286826|lin-9 homolog (C. elegans)##BC045625|LIN9|286826|lin-9 homolog (C. elegans)##NM_173083|LIN9|286826|lin-9 homolog (C. elegans)	0.951718	CTCF.p2:0:0.952
chr2	193027265	193027401	reg1002528.p1	15.095	+	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-315362	-	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	-315595	-	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	-484471	+	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	31981	-	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	32296	-	BC029413 NM_001127257 CR749813	3494242	+	AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	0.996629	CTCF.p2:14:0.997
chr7	100066991	100067111	reg1002867.p1	15.095	+	BC031966 NM_001004323	-5158	-	TSC_hg19_v1_chr7_-_100034098 BC026269 NM_145030	-32974	-	TSC_hg19_v1_chr7_+_100027484 AK291366 BC000556 BC018935	-39522	+	BC001966 BC031622 AK314824 TSC_hg19_v1_chr7_-_100076802 BC002972 BC010406 AK296580 AK297702 AK310800 BC001486 NM_030935	9776	-	AK124773 NM_173564	14498	+	TSC_hg19_v1_chr7_+_100136826 NM_006076 BC009393	69760	+	BC031966|C7orf61|402573|chromosome 7 open reading frame 61##NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61##BC026269|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##NM_145030|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##AK291366|MEPCE|56257|methylphosphate capping enzyme##BC000556|MEPCE|56257|methylphosphate capping enzyme##BC018935|MEPCE|56257|methylphosphate capping enzyme##BC001966|TSC22D4|81628|TSC22 domain family, member 4##BC031622|TSC22D4|81628|TSC22 domain family, member 4##AK314824|TSC22D4|81628|TSC22 domain family, member 4##BC002972|TSC22D4|81628|TSC22 domain family, member 4##BC010406|TSC22D4|81628|TSC22 domain family, member 4##AK296580|TSC22D4|81628|TSC22 domain family, member 4##AK297702|TSC22D4|81628|TSC22 domain family, member 4##BC001486|TSC22D4|81628|TSC22 domain family, member 4##NM_030935|TSC22D4|81628|TSC22 domain family, member 4##AK124773|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_173564|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_006076|AGFG2|3268|ArfGAP with FG repeats 2##BC009393|AGFG2|3268|ArfGAP with FG repeats 2	0.994064	CTCF.p2:-8:0.994
chr9	36166619	36166753	reg1002776.p1	15.095	+	TSC_hg19_v1_chr9_+_36136731 AK074488 BC017918 AK075091 AK298741 AK307243 CR749781 AY039756 NM_022343	-29954	+	TSC_hg19_v1_chr9_+_36036901 AK292653 NM_021111 AK315073 BC050306 BC032240 BC060806 BC137093 CU687432	-129739	+	HQ258184 BC104869 BC113651 NM_019897	-208564	-	AK313763 NM_005893 AF333334 BC019251 DQ890826 DQ893980 DQ893982 EU176505 Z46967	2760	+	NM_001076677 NM_001184760 NM_001184761 NM_001184762 NM_001833 NM_007096 TSC_hg19_v1_chr9_+_36190877	24181	+	TSC_hg19_v1_chr9_+_36190919 AK291078	24219	+	AK074488|GLIPR2|152007|GLI pathogenesis-related 2##BC017918|GLIPR2|152007|GLI pathogenesis-related 2##AK075091|GLIPR2|152007|GLI pathogenesis-related 2##AK298741|GLIPR2|152007|GLI pathogenesis-related 2##AK307243|GLIPR2|152007|GLI pathogenesis-related 2##CR749781|GLIPR2|152007|GLI pathogenesis-related 2##AY039756|GLIPR2|152007|GLI pathogenesis-related 2##NM_022343|GLIPR2|152007|GLI pathogenesis-related 2##AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##HQ258184|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC104869|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC113651|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##NM_019897|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##AK313763|CCIN|881|calicin##NM_005893|CCIN|881|calicin##AF333334|CCIN|881|calicin##BC019251|CCIN|881|calicin##DQ890826|CCIN|881|calicin##DQ893980|CCIN|881|calicin##DQ893982|CCIN|881|calicin##EU176505|CCIN|881|calicin##Z46967|CCIN|881|calicin##NM_001076677|CLTA|1211|clathrin, light chain A##NM_001184760|CLTA|1211|clathrin, light chain A##NM_001184761|CLTA|1211|clathrin, light chain A##NM_001184762|CLTA|1211|clathrin, light chain A##NM_001833|CLTA|1211|clathrin, light chain A##NM_007096|CLTA|1211|clathrin, light chain A##AK291078|CLTA|1211|clathrin, light chain A	0.078773	
chr10	120000900	120001013	reg1001754.p2	15.094	+	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	-194526	+	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	-194912	-	TSC_hg19_v1_chr10_+_119302713 AB463605	-698213	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	100868	-	AK313269 AK290461 NM_004248	354202	-	CU691560 TSC_hg19_v1_chr10_-_120514298	513331	-	BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A##AK313269|PRLHR|2834|prolactin releasing hormone receptor##AK290461|PRLHR|2834|prolactin releasing hormone receptor##NM_004248|PRLHR|2834|prolactin releasing hormone receptor	0.775152	CTCF.p2:4:0.775
chr11	18753615	18753754	reg1002989.p1	15.092	+	BC115396 BC115397 AK095113 NM_173588	-5937	-	TSC_hg19_v1_chr11_+_18720347 BC035692 NM_153347	-33336	+	TSC_hg19_v1_chr11_+_18720321 AK074600	-33381	+	AK294374 BC064807 AK316270 AK294673 BC039897 AK295604 AK090923 AX746685 AL832541 NM_001039970 NM_006906 NM_032781 TSC_hg19_v1_chr11_-_18813404	59581	-	BC096835 NM_147199	202862	-	BC063450 NM_054030	328543	-	BC115396|IGSF22|283284|immunoglobulin superfamily, member 22##BC115397|IGSF22|283284|immunoglobulin superfamily, member 22##AK095113|IGSF22|283284|immunoglobulin superfamily, member 22##NM_173588|IGSF22|283284|immunoglobulin superfamily, member 22##BC035692|TMEM86A|144110|transmembrane protein 86A##NM_153347|TMEM86A|144110|transmembrane protein 86A##AK074600|TMEM86A|144110|transmembrane protein 86A##AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC096835|MRGPRX1|259249|MAS-related GPR, member X1##NM_147199|MRGPRX1|259249|MAS-related GPR, member X1##BC063450|MRGPRX2|117194|MAS-related GPR, member X2##NM_054030|MRGPRX2|117194|MAS-related GPR, member X2	0.99144	CTCF.p2:13:0.991
chr16	20861333	20861458	reg1002872.p1	15.092	+	TSC_hg19_v1_chr16_+_20818060 AK314458 BC068503	-43351	+	NM_001144924 NM_001199053 NM_030941 TSC_hg19_v1_chr16_+_20817848 BC007646 AF332193 AL136763	-43579	+	AK292594 TSC_hg19_v1_chr16_-_20817795 AK304347 BC010503 NM_001142725 NM_080663 AK127391	-43610	-	AK308690 NM_020424	50161	+	BX648998 NM_173475 TSC_hg19_v1_chr16_-_20911681 BC040442 BX648185	50255	-	AK311415 NM_001128301 NM_001128302 TSC_hg19_v1_chr16_+_20912121 AK311881	50726	+	AK314458|LOC81691|81691|exonuclease NEF-sp##BC068503|LOC81691|81691|exonuclease NEF-sp##NM_001144924|LOC81691|81691|exonuclease NEF-sp##NM_001199053|LOC81691|81691|exonuclease NEF-sp##NM_030941|LOC81691|81691|exonuclease NEF-sp##BC007646|LOC81691|81691|exonuclease NEF-sp##AF332193|LOC81691|81691|exonuclease NEF-sp##AL136763|LOC81691|81691|exonuclease NEF-sp##AK292594|ERI2|112479|ERI1 exoribonuclease family member 2##AK304347|ERI2|112479|ERI1 exoribonuclease family member 2##BC010503|ERI2|112479|ERI1 exoribonuclease family member 2##NM_001142725|ERI2|112479|ERI1 exoribonuclease family member 2##NM_080663|ERI2|112479|ERI1 exoribonuclease family member 2##AK127391|ERI2|112479|ERI1 exoribonuclease family member 2##AK308690|LYRM1|57149|LYR motif containing 1##NM_020424|LYRM1|57149|LYR motif containing 1##BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##AK311415|LYRM1|57149|LYR motif containing 1##NM_001128301|LYRM1|57149|LYR motif containing 1##NM_001128302|LYRM1|57149|LYR motif containing 1##AK311881|LYRM1|57149|LYR motif containing 1	0.149136	
chr7	148224849	148224985	reg1003124.p1	15.091	+	TSC_hg19_v1_chr7_+_148036552 CR933671	-188352	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-2411033	+	NM_014141	-2411465	+	BC021251 NM_145304	62739	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	171023	+	TSC_hg19_v1_chr7_+_148396012 BX537409	171087	+	CR933671|CNTNAP2|26047|contactin associated protein-like 2##AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1##BX537409|CUL1|8454|cullin 1	1.699893	CTCF.p2:5:0.998	CTCF.p2:-29:0.701
chr16	30221908	30222022	reg1002081.p1	15.090	+	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	-11397	+	BC022832 NM_001031827 NM_001039182	-16339	-	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	-16772	+	TSC_hg19_v1_chr16_-_30346695 AK289905 BC063703	124734	-	BC013854 NM_001243646	144289	-	AK315708 TSC_hg19_v1_chr16_-_30366603 BC000495 BC001947 AF104222	144635	-	AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK289905|LOC595101|595101|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene##BC063703|LOC595101|595101|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene##BC013854|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##NM_001243646|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##AK315708|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##BC000495|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##BC001947|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##AF104222|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2	0.830069	CTCF.p2:-5:0.830
chr16	67219420	67219528	reg1002509.p1	15.090	+	TSC_hg19_v1_chr16_-_67217867 AL834156 NM_001040715	-1612	-	TSC_hg19_v1_chr16_-_67217476 AK094787 AK096855 BC080183	-2033	-	NM_003946 NM_001185057 AF043244 TSC_hg19_v1_chr16_+_67207847 AK314899 BC012798 AF064600 AF064599	-11645	+	AK092858 AX747772 BC034287 AK292004 AK092906 AX747800 AK300915 AY255669 NM_178516	4578	-	TSC_hg19_v1_chr16_+_67226057 NM_001950 U15641	6573	+	TSC_hg19_v1_chr16_+_67226087 BC010079 BC031071 S75174	6609	+	AL834156|KIAA0895L|653319|KIAA0895-like##NM_001040715|KIAA0895L|653319|KIAA0895-like##AK094787|KIAA0895L|653319|KIAA0895-like##AK096855|KIAA0895L|653319|KIAA0895-like##BC080183|KIAA0895L|653319|KIAA0895-like##NM_003946|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##NM_001185057|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AF043244|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AK314899|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##BC012798|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AF064600|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AF064599|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AK092858|EXOC3L1|283849|exocyst complex component 3-like 1##BC034287|EXOC3L1|283849|exocyst complex component 3-like 1##AK292004|EXOC3L1|283849|exocyst complex component 3-like 1##AK092906|EXOC3L1|283849|exocyst complex component 3-like 1##AK300915|EXOC3L1|283849|exocyst complex component 3-like 1##NM_178516|EXOC3L1|283849|exocyst complex component 3-like 1##NM_001950|E2F4|1874|E2F transcription factor 4, p107/p130-binding##U15641|E2F4|1874|E2F transcription factor 4, p107/p130-binding##BC031071|E2F4|1874|E2F transcription factor 4, p107/p130-binding##S75174|E2F4|1874|E2F transcription factor 4, p107/p130-binding	0.970714	CTCF.p2:1:0.971
chr22	37473964	37474096	reg1002758.p1	15.088	+	TSC_hg19_v1_chr22_+_37447781 NM_024681 BC025403 BC031038 BC009961 AK022304	-26251	+	TSC_hg19_v1_chr22_+_37415797 BC016737 AB208824	-58192	+	NM_001013436 NM_001130517 NM_021126 TSC_hg19_v1_chr22_+_37415789	-58285	+	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	25545	-	CR456446 TSC_hg19_v1_chr22_-_37505748	31648	-	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	71922	-	NM_024681|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC025403|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC031038|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC009961|KCTD17|79734|potassium channel tetramerisation domain containing 17##AK022304|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC016737|MPST|4357|mercaptopyruvate sulfurtransferase##AB208824|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001013436|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001130517|MPST|4357|mercaptopyruvate sulfurtransferase##NM_021126|MPST|4357|mercaptopyruvate sulfurtransferase##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##CR456446|TMPRSS6|164656|transmembrane protease, serine 6##BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta	0.97715	CTCF.p2:-13:0.977
chr22	34810931	34811056	reg1002727.p1	15.087	+	AJ007583 AB011181 NM_004737 NM_133642	-494623	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-1356638	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-1408267	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	651156	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	842483	+	AK293694 NM_001135729	884274	+	AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)	0.0	
chr3	46414114	46414243	reg1002245.p1	15.086	+	NM_000579 NM_001100168	-2546	+	TSC_hg19_v1_chr3_+_46395601 AK292920 U03905	-18571	+	AK292685 NM_001123041 NM_001123396	-18949	+	AF015525 NM_003965 AF014958 BC071682 BC025717 BC096075 BC096076 BC099623 AK296673 NM_001130910 AK313312 AF015524	34718	+	AK316330 U84119 AK298035 NM_001199149	90940	-	M83205 X52941 AF332168 AY137470 AY178998 AY875691 DQ522304 EU779935 AB527812 AY360320 DQ892855 DQ896102 M83202 M93150 AY165046 AK290859 AK292813 AK303889 BC015822 BC022347 BC015823 AY493417 NM_002343 X53961	92319	-	NM_000579|CCR5|1234|chemokine (C-C motif) receptor 5##NM_001100168|CCR5|1234|chemokine (C-C motif) receptor 5##AK292920|CCR2|729230|chemokine (C-C motif) receptor 2##U03905|CCR2|729230|chemokine (C-C motif) receptor 2##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2##AF015525|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_003965|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC071682|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC096075|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC096076|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK296673|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_001130910|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK313312|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AF015524|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK316330|LTF|4057|lactotransferrin##U84119|LTF|4057|lactotransferrin##AK298035|LTF|4057|lactotransferrin##NM_001199149|LTF|4057|lactotransferrin##M83205|LTF|4057|lactotransferrin##X52941|LTF|4057|lactotransferrin##AF332168|LTF|4057|lactotransferrin##AY137470|LTF|4057|lactotransferrin##AY178998|LTF|4057|lactotransferrin##AY875691|LTF|4057|lactotransferrin##DQ522304|LTF|4057|lactotransferrin##EU779935|LTF|4057|lactotransferrin##AY360320|LTF|4057|lactotransferrin##DQ892855|LTF|4057|lactotransferrin##DQ896102|LTF|4057|lactotransferrin##M83202|LTF|4057|lactotransferrin##M93150|LTF|4057|lactotransferrin##AY165046|LTF|4057|lactotransferrin##AK290859|LTF|4057|lactotransferrin##AK292813|LTF|4057|lactotransferrin##AK303889|LTF|4057|lactotransferrin##BC015822|LTF|4057|lactotransferrin##BC022347|LTF|4057|lactotransferrin##BC015823|LTF|4057|lactotransferrin##AY493417|LTF|4057|lactotransferrin##NM_002343|LTF|4057|lactotransferrin##X53961|LTF|4057|lactotransferrin	0.576791	CTCF.p2:7:0.577
chr10	81982525	81982629	reg1001611.p2	15.085	+	TSC_hg19_v1_chr10_-_81965334 AK056107	-17195	-	AJ278463 AJ278464 AJ278465 AK000567 NM_001157 NM_145868 NM_145869 TSC_hg19_v1_chr10_-_81965329	-17248	-	TSC_hg19_v1_chr10_-_81965293 AK301047	-17275	-	DQ891073 DQ894256 D49357 X69078 AK290820 BC018359 TSC_hg19_v1_chr10_-_82049413 NM_000429	66728	-	BC019250 NM_138812 AK125908 AK292542	133927	-	AK093378 AX748088 NM_032372	133980	+	AK056107|ANXA11|311|annexin A11##AJ278463|ANXA11|311|annexin A11##AJ278464|ANXA11|311|annexin A11##AJ278465|ANXA11|311|annexin A11##AK000567|ANXA11|311|annexin A11##NM_001157|ANXA11|311|annexin A11##NM_145868|ANXA11|311|annexin A11##NM_145869|ANXA11|311|annexin A11##AK301047|ANXA11|311|annexin A11##DQ891073|MAT1A|4143|methionine adenosyltransferase I, alpha##DQ894256|MAT1A|4143|methionine adenosyltransferase I, alpha##D49357|MAT1A|4143|methionine adenosyltransferase I, alpha##X69078|MAT1A|4143|methionine adenosyltransferase I, alpha##AK290820|MAT1A|4143|methionine adenosyltransferase I, alpha##BC018359|MAT1A|4143|methionine adenosyltransferase I, alpha##NM_000429|MAT1A|4143|methionine adenosyltransferase I, alpha##BC019250|DYDC1|143241|DPY30 domain containing 1##NM_138812|DYDC1|143241|DPY30 domain containing 1##AK125908|DYDC1|143241|DPY30 domain containing 1##AK292542|DYDC1|143241|DPY30 domain containing 1##AK093378|DYDC2|84332|DPY30 domain containing 2##NM_032372|DYDC2|84332|DPY30 domain containing 2	0.998542	CTCF.p2:25:0.999
chr4	6722098	6722239	reg1002904.p1	15.084	+	TSC_hg19_v1_chr4_+_6717915 BC067815 BC001818 AB464471 BC009890	-4246	+	AK002092 NM_018366 TSC_hg19_v1_chr4_+_6717894	-4300	+	AF155654 BC066897 NM_203462 TSC_hg19_v1_chr4_-_6711607	-10562	-	TSC_hg19_v1_chr4_+_6784458 NM_001100590 NM_014743	62287	+	TSC_hg19_v1_chr4_+_6784467 BC150286 D86985	62306	+	TSC_hg19_v1_chr4_+_6784518 AK124715 EF553521	62360	+	BC067815|CNO|55330|cappuccino homolog (mouse)##BC001818|CNO|55330|cappuccino homolog (mouse)##BC009890|CNO|55330|cappuccino homolog (mouse)##AK002092|CNO|55330|cappuccino homolog (mouse)##NM_018366|CNO|55330|cappuccino homolog (mouse)##AF155654|MRFAP1L1|114932|Morf4 family associated protein 1-like 1##BC066897|MRFAP1L1|114932|Morf4 family associated protein 1-like 1##NM_203462|MRFAP1L1|114932|Morf4 family associated protein 1-like 1##NM_001100590|KIAA0232|9778|KIAA0232##NM_014743|KIAA0232|9778|KIAA0232##BC150286|KIAA0232|9778|KIAA0232##D86985|KIAA0232|9778|KIAA0232##AK124715|KIAA0232|9778|KIAA0232##EF553521|KIAA0232|9778|KIAA0232	0.95619	CTCF.p2:-9:0.956
chr11	67627350	67627462	reg1003041.p1	15.081	+	TSC_hg19_v1_chr11_-_67572800 BC063712 BC110365	-54654	-	TSC_hg19_v1_chr11_-_67450557 AB055770	-176860	-	BC007685 NM_001031615	-178722	-	TSC_hg19_v1_chr11_-_67771527 BC101568 BC105104 BC025669 AJ422142 AJ271326 BC092472 BC033623 NM_030930	144161	-	TSC_hg19_v1_chr11_+_67776039 EF411198 NM_001161473	148625	+	TSC_hg19_v1_chr11_+_67777790 NM_000694 NM_001030010 BC002553 AK291505	150384	+	BC063712|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC110365|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##AB055770|RPL37|6167|ribosomal protein L37##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC101568|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC105104|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC025669|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ422142|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ271326|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC092472|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC033623|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##NM_030930|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##EF411198|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001161473|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_000694|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001030010|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##BC002553|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##AK291505|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1	0.991264	CTCF.p2:2:0.991
chr18	46238410	46238530	reg1002162.p1	15.081	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-172697	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-302761	-	AM988836 AK296709 NM_001039360 EF120357	-574771	-	AK131394 NM_001190823	230677	-	AK301535 NM_001190822	237232	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	238297	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.027868	
chr11	71350375	71350481	reg1001890.p1	15.080	+	BC130498 BC130502 AB126080 NM_001005405	-56514	-	AB126079 BC137550 BC137566 NM_001012710	-73820	+	NM_005553 X63755 BC101744 AB126078 CU686892 BC069531	-90844	+	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	148179	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	174478	-	AF529416 NM_001002035	193817	+	BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11##AB126079|KRTAP5-10|387273|keratin associated protein 5-10##BC137550|KRTAP5-10|387273|keratin associated protein 5-10##BC137566|KRTAP5-10|387273|keratin associated protein 5-10##NM_001012710|KRTAP5-10|387273|keratin associated protein 5-10##NM_005553|KRTAP5-9|3846|keratin associated protein 5-9##X63755|KRTAP5-9|3846|keratin associated protein 5-9##BC101744|KRTAP5-9|3846|keratin associated protein 5-9##AB126078|KRTAP5-9|3846|keratin associated protein 5-9##BC069531|KRTAP5-9|3846|keratin associated protein 5-9##NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1##BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene##AF529416|DEFB108B|245911|defensin, beta 108B##NM_001002035|DEFB108B|245911|defensin, beta 108B	0.999902	CTCF.p2:-4:1.000
chr14	105116785	105116889	reg1002017.p1	15.080	+	AB464314 AK124477 NM_207379	-45749	-	AK095913 NM_001008404 AK297818 AK309489 BC041103	-70751	+	TSC_hg19_v1_chr14_+_104605441 AB033062	-511385	+	TSC_hg19_v1_chr14_+_105147469 BC035345	30625	+	TSC_hg19_v1_chr14_+_105155954 NM_001031714 NM_022489 NM_032714 AK290083 BC006173 BX248757	39047	+	TSC_hg19_v1_chr14_+_105173955 DQ395338 DQ395339 DQ395340	57260	+	AK124477|TMEM179|388021|transmembrane protein 179##NM_207379|TMEM179|388021|transmembrane protein 179##AK095913|C14orf180|400258|chromosome 14 open reading frame 180##NM_001008404|C14orf180|400258|chromosome 14 open reading frame 180##AK297818|C14orf180|400258|chromosome 14 open reading frame 180##AK309489|C14orf180|400258|chromosome 14 open reading frame 180##BC041103|C14orf180|400258|chromosome 14 open reading frame 180##AB033062|KIF26A|26153|kinesin family member 26A##NM_001031714|INF2|64423|inverted formin, FH2 and WH2 domain containing##NM_022489|INF2|64423|inverted formin, FH2 and WH2 domain containing##NM_032714|INF2|64423|inverted formin, FH2 and WH2 domain containing##AK290083|INF2|64423|inverted formin, FH2 and WH2 domain containing##BC006173|INF2|64423|inverted formin, FH2 and WH2 domain containing##BX248757|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395338|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395339|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395340|INF2|64423|inverted formin, FH2 and WH2 domain containing	0.989951	CTCF.p2:8:0.971
chr11	113403539	113403679	reg1002172.p2	15.079	+	S69899 BC021195 NM_000795 NM_016574 M30625	-57634	-	AJ541797 NM_178510 AF487542	-145050	+	NM_017868 AK023921 TSC_hg19_v1_chr11_+_113185315 AK292331 AK091887 BC011546 BC019086 BC032355	-218319	+	AK295366 BC047222 AK294313 BC028065 BC121802 BC121803 NM_030770 TSC_hg19_v1_chr11_-_113577091 AB028140	173449	-	TSC_hg19_v1_chr11_-_113644415 U54996 BC128264	240802	-	TSC_hg19_v1_chr11_-_113644447 AK300746 AK312925	240841	-	S69899|DRD2|1813|dopamine receptor D2##BC021195|DRD2|1813|dopamine receptor D2##NM_000795|DRD2|1813|dopamine receptor D2##NM_016574|DRD2|1813|dopamine receptor D2##M30625|DRD2|1813|dopamine receptor D2##AJ541797|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_178510|ANKK1|255239|ankyrin repeat and kinase domain containing 1##AF487542|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_017868|TTC12|54970|tetratricopeptide repeat domain 12##AK023921|TTC12|54970|tetratricopeptide repeat domain 12##AK292331|TTC12|54970|tetratricopeptide repeat domain 12##AK091887|TTC12|54970|tetratricopeptide repeat domain 12##BC011546|TTC12|54970|tetratricopeptide repeat domain 12##BC019086|TTC12|54970|tetratricopeptide repeat domain 12##BC032355|TTC12|54970|tetratricopeptide repeat domain 12##AK295366|TMPRSS5|80975|transmembrane protease, serine 5##BC047222|TMPRSS5|80975|transmembrane protease, serine 5##AK294313|TMPRSS5|80975|transmembrane protease, serine 5##BC028065|TMPRSS5|80975|transmembrane protease, serine 5##BC121802|TMPRSS5|80975|transmembrane protease, serine 5##BC121803|TMPRSS5|80975|transmembrane protease, serine 5##NM_030770|TMPRSS5|80975|transmembrane protease, serine 5##AB028140|TMPRSS5|80975|transmembrane protease, serine 5##U54996|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##BC128264|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AK300746|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AK312925|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)	0.999235	CTCF.p2:13:0.999
chr19	42688589	42688710	reg1001460.p1	15.079	+	M36718 X13809 BT007438 AB590941 TSC_hg19_v1_chr19_-_42636564 BC006101 M36653 NM_001207025 NM_001207026 NM_001247994 NM_002698 X53468	-52058	-	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	-108283	+	TSC_hg19_v1_chr19_+_42580286 NM_022752	-108367	+	TSC_hg19_v1_chr19_-_42721830 BC027930 NM_133328 AY125488 BC013372 AK307895 AK130203 AK075328	33190	-	TSC_hg19_v1_chr19_+_42724463 AK298895 AB075831 NM_133444	35815	+	AK122649 TSC_hg19_v1_chr19_+_42724498 BC013013	35852	+	M36718|POU2F2|5452|POU class 2 homeobox 2##X13809|POU2F2|5452|POU class 2 homeobox 2##BT007438|POU2F2|5452|POU class 2 homeobox 2##BC006101|POU2F2|5452|POU class 2 homeobox 2##M36653|POU2F2|5452|POU class 2 homeobox 2##NM_001207025|POU2F2|5452|POU class 2 homeobox 2##NM_001207026|POU2F2|5452|POU class 2 homeobox 2##NM_001247994|POU2F2|5452|POU class 2 homeobox 2##NM_002698|POU2F2|5452|POU class 2 homeobox 2##X53468|POU2F2|5452|POU class 2 homeobox 2##AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574##NM_022752|ZNF574|64763|zinc finger protein 574##BC027930|DEDD2|162989|death effector domain containing 2##NM_133328|DEDD2|162989|death effector domain containing 2##AY125488|DEDD2|162989|death effector domain containing 2##BC013372|DEDD2|162989|death effector domain containing 2##AK307895|DEDD2|162989|death effector domain containing 2##AK130203|DEDD2|162989|death effector domain containing 2##AK075328|DEDD2|162989|death effector domain containing 2##AK298895|ZNF526|116115|zinc finger protein 526##AB075831|ZNF526|116115|zinc finger protein 526##NM_133444|ZNF526|116115|zinc finger protein 526##AK122649|ZNF526|116115|zinc finger protein 526##BC013013|ZNF526|116115|zinc finger protein 526	0.99979	CTCF.p2:17:1.000
chr3	196564856	196564987	reg1001848.p1	15.079	+	TSC_hg19_v1_chr3_+_196466844 AK291339	-98096	+	TSC_hg19_v1_chr3_+_196466727 NM_002577	-98196	+	TSC_hg19_v1_chr3_+_196439214 NM_001166304 NM_017861 AK000529 BC022542	-125662	+	TSC_hg19_v1_chr3_+_196594754 AK302305 NM_152699 AK313764	29811	+	TSC_hg19_v1_chr3_+_196594770 BC030705	29849	+	AK093216 AK297506 TSC_hg19_v1_chr3_-_196669320	104370	-	AK291339|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2##NM_002577|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2##NM_001166304|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##NM_017861|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##AK000529|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##BC022542|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##AK302305|SENP5|205564|SUMO1/sentrin specific peptidase 5##NM_152699|SENP5|205564|SUMO1/sentrin specific peptidase 5##AK313764|SENP5|205564|SUMO1/sentrin specific peptidase 5##BC030705|SENP5|205564|SUMO1/sentrin specific peptidase 5##AK093216|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AK297506|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa	0.945457	CTCF.p2:-4:0.945
chr6	25279188	25279320	reg1002807.p1	15.079	+	TSC_hg19_v1_chr6_-_24936189 AK299047	-343071	-	AB002384 NM_014722	-368060	-	U49187 AK300138 BC001232 NM_015864	-401737	-	TSC_hg19_v1_chr6_+_25279316 BC040903	64	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	404	+	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	640	+	AK299047|FAM65B|9750|family with sequence similarity 65, member B##AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A	0.958201	CTCF.p2:-1:0.958
chr8	96037040	96037181	reg1003191.p1	15.079	+	TSC_hg19_v1_chr8_-_95961604 AK315071 AF409114 AF409115 AK125880 NM_001135733 NM_033285	-75453	-	TSC_hg19_v1_chr8_-_95907430 BC007015 BC020729 NM_057749	-129658	-	TSC_hg19_v1_chr8_+_95835588 BC136754 BC144396 BC144397	-201410	+	TSC_hg19_v1_chr8_+_96037224 NM_152416 BC028166 DQ891641 DQ894830 AK298631 AK301414	194	+	TSC_hg19_v1_chr8_+_96145948 NM_024613	108835	+	TSC_hg19_v1_chr8_+_96146012 AL834473 BC011806	108898	+	AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##BC007015|CCNE2|9134|cyclin E2##BC020729|CCNE2|9134|cyclin E2##NM_057749|CCNE2|9134|cyclin E2##BC136754|INTS8|55656|integrator complex subunit 8##BC144396|INTS8|55656|integrator complex subunit 8##BC144397|INTS8|55656|integrator complex subunit 8##NM_152416|C8orf38|137682|chromosome 8 open reading frame 38##BC028166|C8orf38|137682|chromosome 8 open reading frame 38##DQ891641|C8orf38|137682|chromosome 8 open reading frame 38##DQ894830|C8orf38|137682|chromosome 8 open reading frame 38##AK298631|C8orf38|137682|chromosome 8 open reading frame 38##AK301414|C8orf38|137682|chromosome 8 open reading frame 38##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##AL834473|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC011806|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2	0.035993	
chr11	6400623	6400744	reg1002461.p1	15.078	+	DQ892300 DQ895499 BC038387 TSC_hg19_v1_chr11_-_6341732 BC011585 NM_145040 AF339881	-58950	-	NM_176875 D13305 S70057 L07746 AK292064 AK226020 BC000740 AK314266 AB527993 AF239668 Y13464 DQ890577 DQ893737 AF441129 AY029770 AY322551 BT006789 L04473 L08112	-119653	+	NM_001037329 AK122736	-140358	+	TSC_hg19_v1_chr11_+_6411681 NM_000543 NM_001007593 AB209775 AK292388 X59960 BC041164 M59916 AY649987 HQ132745 HQ132746 HQ132747 HQ132748	11049	+	TSC_hg19_v1_chr11_-_6440299 AK293452 AF394214 L77864 NM_001164 AK293613 AK294495 AK311725	39640	-	AK297544 BC010854 NM_145689 TSC_hg19_v1_chr11_-_6440647	39957	-	DQ892300|PRKCDBP|112464|protein kinase C, delta binding protein##DQ895499|PRKCDBP|112464|protein kinase C, delta binding protein##BC038387|PRKCDBP|112464|protein kinase C, delta binding protein##BC011585|PRKCDBP|112464|protein kinase C, delta binding protein##NM_145040|PRKCDBP|112464|protein kinase C, delta binding protein##AF339881|PRKCDBP|112464|protein kinase C, delta binding protein##NM_176875|CCKBR|887|cholecystokinin B receptor##D13305|CCKBR|887|cholecystokinin B receptor##S70057|CCKBR|887|cholecystokinin B receptor##L07746|CCKBR|887|cholecystokinin B receptor##AK292064|CCKBR|887|cholecystokinin B receptor##AK226020|CCKBR|887|cholecystokinin B receptor##BC000740|CCKBR|887|cholecystokinin B receptor##AK314266|CCKBR|887|cholecystokinin B receptor##AF239668|CCKBR|887|cholecystokinin B receptor##DQ890577|CCKBR|887|cholecystokinin B receptor##DQ893737|CCKBR|887|cholecystokinin B receptor##AF441129|CCKBR|887|cholecystokinin B receptor##AY029770|CCKBR|887|cholecystokinin B receptor##AY322551|CCKBR|887|cholecystokinin B receptor##BT006789|CCKBR|887|cholecystokinin B receptor##L04473|CCKBR|887|cholecystokinin B receptor##L08112|CCKBR|887|cholecystokinin B receptor##NM_001037329|CNGA4|1262|cyclic nucleotide gated channel alpha 4##AK122736|CNGA4|1262|cyclic nucleotide gated channel alpha 4##NM_000543|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##NM_001007593|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AB209775|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK292388|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##X59960|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##BC041164|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##M59916|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AY649987|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132745|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132746|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132747|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132748|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK293452|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AF394214|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##L77864|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_001164|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK293613|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK294495|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK311725|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK297544|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##BC010854|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_145689|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)	0.787671	CTCF.p2:-13:0.788
chr16	81756836	81756973	reg1001901.p1	15.077	+	AY172689 NM_030629	-227951	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-278071	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-408254	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	55993	+	TSC_hg19_v1_chr16_+_81812901 AB208914	55998	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	56026	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.999698	CTCF.p2:13:1.000
chr4	40978377	40978508	reg1001863.p1	15.074	+	BC088372 TSC_hg19_v1_chr4_-_40936716	-41764	-	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-119267	-	BC042401 NM_024677 BC036568 AK024063	-226496	+	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	238127	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	280454	+	TSC_hg19_v1_chr4_+_41258913 BC000332 BC018838	280476	+	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.987211	CTCF.p2:9:0.987
chr3	13689864	13689984	reg1001734.p1	15.071	+	AK304827 NM_001165035	-79685	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	-99261	+	AK129883 NM_001004019 NM_001998 TSC_hg19_v1_chr3_+_13590624	-99299	+	BC008811 NM_004625	231693	-	TSC_hg19_v1_chr3_-_14166228 BC017082	476309	-	TSC_hg19_v1_chr3_-_14166250 BC033775	476326	-	AK304827|FBLN2|2199|fibulin 2##NM_001165035|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2##AK129883|FBLN2|2199|fibulin 2##NM_001004019|FBLN2|2199|fibulin 2##NM_001998|FBLN2|2199|fibulin 2##BC008811|WNT7A|7476|wingless-type MMTV integration site family, member 7A##NM_004625|WNT7A|7476|wingless-type MMTV integration site family, member 7A##BC017082|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##BC033775|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4	0.99458	CTCF.p2:15:0.995
chr12	109702076	109702192	reg1003184.p1	15.070	+	TSC_hg19_v1_chr12_+_109665176 U34591	-36916	+	NM_001093 AJ575431 AJ575592 DQ493870 U89344 TSC_hg19_v1_chr12_+_109577280	-124893	+	TSC_hg19_v1_chr12_+_109554396 AY382667	-147737	+	AK131519 BC113073 BC146825 NM_213596 TSC_hg19_v1_chr12_-_109747027	44899	-	NM_001101421	124389	+	AF113208 BC040062 TSC_hg19_v1_chr12_-_109915106 AK056912 AK222548	212973	-	U34591|ACACB|32|acetyl-CoA carboxylase beta##NM_001093|ACACB|32|acetyl-CoA carboxylase beta##AJ575431|ACACB|32|acetyl-CoA carboxylase beta##AJ575592|ACACB|32|acetyl-CoA carboxylase beta##DQ493870|ACACB|32|acetyl-CoA carboxylase beta##U89344|ACACB|32|acetyl-CoA carboxylase beta##AY382667|ACACB|32|acetyl-CoA carboxylase beta##AK131519|FOXN4|121643|forkhead box N4##BC113073|FOXN4|121643|forkhead box N4##BC146825|FOXN4|121643|forkhead box N4##NM_213596|FOXN4|121643|forkhead box N4##NM_001101421|MYO1H|283446|myosin IH##AF113208|KCTD10|83892|potassium channel tetramerisation domain containing 10##BC040062|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK056912|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK222548|KCTD10|83892|potassium channel tetramerisation domain containing 10	0.999528	CTCF.p2:-8:1.000
chr13	76450660	76450787	reg1002516.p1	15.069	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-115883	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-240253	+	AF330045 NM_005358	-256154	+	BC013764 TSC_hg19_v1_chr13_-_77460431	1009677	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	1009884	-	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	1115446	+	NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5	0.924163	CTCF.p2:-4:0.924
chr4	88387028	88387162	reg1003298.p1	15.068	+	TSC_hg19_v1_chr4_+_88343781 NM_001248011 NM_024047 AK027295 AK074845 NM_198038 AF265341 AF273028 AK075408 AK308028 BC000542 AY359123 CU674266	-43216	+	TSC_hg19_v1_chr4_-_88312341 AK075348 BC008650 BC036001 BC016367 BC011995 NM_016245	-74704	-	AB529195 CU690256 CU679009 AF273056 AY358553 TSC_hg19_v1_chr4_-_88312322 BC014327 BC021673	-74824	-	AK316533 AY513278 AK300956 BC010383 AK294335 BC022484 AK298039 X82157 BX647713 AL833430 AK304628 BC033721 X86693 AK304494 TSC_hg19_v1_chr4_-_88450525	63291	-	TSC_hg19_v1_chr4_-_88450604 NM_001128310 NM_004684	63532	-	NM_014208	142585	+	NM_001248011|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK075348|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC008650|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC036001|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC016367|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC011995|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##NM_016245|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AK316533|SPARCL1|8404|SPARC-like 1 (hevin)##AY513278|SPARCL1|8404|SPARC-like 1 (hevin)##AK300956|SPARCL1|8404|SPARC-like 1 (hevin)##BC010383|SPARCL1|8404|SPARC-like 1 (hevin)##AK294335|SPARCL1|8404|SPARC-like 1 (hevin)##BC022484|SPARCL1|8404|SPARC-like 1 (hevin)##AK298039|SPARCL1|8404|SPARC-like 1 (hevin)##X82157|SPARCL1|8404|SPARC-like 1 (hevin)##BX647713|SPARCL1|8404|SPARC-like 1 (hevin)##AL833430|SPARCL1|8404|SPARC-like 1 (hevin)##AK304628|SPARCL1|8404|SPARC-like 1 (hevin)##BC033721|SPARCL1|8404|SPARC-like 1 (hevin)##X86693|SPARCL1|8404|SPARC-like 1 (hevin)##AK304494|SPARCL1|8404|SPARC-like 1 (hevin)##NM_001128310|SPARCL1|8404|SPARC-like 1 (hevin)##NM_004684|SPARCL1|8404|SPARC-like 1 (hevin)##NM_014208|DSPP|1834|dentin sialophosphoprotein	0.997447	CTCF.p2:10:0.997
chr19	19477773	19477892	reg1002695.p1	15.060	+	TSC_hg19_v1_chr19_+_19431662 AB385396	-46168	+	TSC_hg19_v1_chr19_+_19431637 NM_015329 AB020699	-46198	+	AK096152 AK292085 AK294618 AK301119 BC119728 BC119729 BC142988 TSC_hg19_v1_chr19_-_19431319 NM_172231	-46481	-	TSC_hg19_v1_chr19_+_19496634 NM_017660 AK303482	18874	+	AB464723 DQ891603 DQ894797 AF329483 AK058166 AK313767 BC014611 NM_032037 AF348077	148533	-	TSC_hg19_v1_chr19_+_19626536 AF261134	148733	+	NM_015329|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AB020699|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AK096152|SUGP1|57794|SURP and G patch domain containing 1##AK292085|SUGP1|57794|SURP and G patch domain containing 1##AK294618|SUGP1|57794|SURP and G patch domain containing 1##AK301119|SUGP1|57794|SURP and G patch domain containing 1##BC119728|SUGP1|57794|SURP and G patch domain containing 1##BC119729|SUGP1|57794|SURP and G patch domain containing 1##BC142988|SUGP1|57794|SURP and G patch domain containing 1##NM_172231|SUGP1|57794|SURP and G patch domain containing 1##NM_017660|GATAD2A|54815|GATA zinc finger domain containing 2A##AK303482|GATAD2A|54815|GATA zinc finger domain containing 2A##DQ891603|TSSK6|83983|testis-specific serine kinase 6##DQ894797|TSSK6|83983|testis-specific serine kinase 6##AF329483|TSSK6|83983|testis-specific serine kinase 6##AK058166|TSSK6|83983|testis-specific serine kinase 6##AK313767|TSSK6|83983|testis-specific serine kinase 6##BC014611|TSSK6|83983|testis-specific serine kinase 6##NM_032037|TSSK6|83983|testis-specific serine kinase 6##AF348077|TSSK6|83983|testis-specific serine kinase 6##AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	0.994786	CTCF.p2:8:0.995
chr5	39949122	39949250	reg1002869.p1	15.059	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-523869	-	TSC_hg19_v1_chr5_-_39425082 AK314381	-524122	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	-524235	-	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	730841	+	TSC_hg19_v1_chr5_+_40680042 L25124	730858	+	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	806854	-	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33	0.998849	CTCF.p2:-16:0.999
chr11	7687077	7687202	reg1002312.p1	15.058	+	AK296718 TSC_hg19_v1_chr11_+_7618421	-68721	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	-151896	+	NM_003621 BC021714 TSC_hg19_v1_chr11_+_7535171	-152036	+	AB209000 BC001346 AF169802 NM_016229	7613	-	NM_198185	40801	-	AF173006 NM_153444 HQ258379 BC101710 BC113557	131364	-	AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##NM_003621|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##BC021714|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AB209000|CYB5R2|51700|cytochrome b5 reductase 2##BC001346|CYB5R2|51700|cytochrome b5 reductase 2##AF169802|CYB5R2|51700|cytochrome b5 reductase 2##NM_016229|CYB5R2|51700|cytochrome b5 reductase 2##NM_198185|OVCH2|341277|ovochymase 2 (gene/pseudogene)##AF173006|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##NM_153444|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##HQ258379|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##BC101710|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##BC113557|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	0.987109	CTCF.p2:17:0.973
chr8	8528182	8528326	reg1000487.p2	15.057	+	AK122582 NM_001080826	-289032	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-352366	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-442112	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	31444	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	222684	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	332111	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.796255	CTCF.p2:-11:0.796
chr22	31030533	31030648	reg1002284.p1	15.056	+	NM_000355 NM_001184726 TSC_hg19_v1_chr22_+_31003162 AK313711 BC011239 BC001176 L02647 L02648 AK225445 CR456591 M60396 AB528246 CU013191 CU013479 DQ892811 DQ896057 CU679894	-27397	+	TSC_hg19_v1_chr22_-_30987884 BC032489 U78310 AK315518 NM_001243225 NM_014303	-42694	-	AB385086 AB451380 CU013139 CU013427 CU689394 TSC_hg19_v1_chr22_-_30987858 CR456539	-42749	-	TSC_hg19_v1_chr22_+_31031763 NM_001001479 BC040191	1146	+	AF533017 TSC_hg19_v1_chr22_-_31063662	33048	-	TSC_hg19_v1_chr22_-_31063837 BC030987 BC028724 AF461689 AK056074 NM_152511	33245	-	NM_000355|TCN2|6948|transcobalamin II##NM_001184726|TCN2|6948|transcobalamin II##AK313711|TCN2|6948|transcobalamin II##BC011239|TCN2|6948|transcobalamin II##BC001176|TCN2|6948|transcobalamin II##L02647|TCN2|6948|transcobalamin II##L02648|TCN2|6948|transcobalamin II##AK225445|TCN2|6948|transcobalamin II##CR456591|TCN2|6948|transcobalamin II##M60396|TCN2|6948|transcobalamin II##CU013191|TCN2|6948|transcobalamin II##CU013479|TCN2|6948|transcobalamin II##DQ892811|TCN2|6948|transcobalamin II##DQ896057|TCN2|6948|transcobalamin II##BC032489|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##U78310|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##AK315518|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##NM_001243225|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##NM_014303|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##AB451380|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##CU013139|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##CU013427|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##CR456539|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##NM_001001479|SLC35E4|339665|solute carrier family 35, member E4##BC040191|SLC35E4|339665|solute carrier family 35, member E4##AF533017|DUSP18|150290|dual specificity phosphatase 18##BC030987|DUSP18|150290|dual specificity phosphatase 18##BC028724|DUSP18|150290|dual specificity phosphatase 18##AF461689|DUSP18|150290|dual specificity phosphatase 18##AK056074|DUSP18|150290|dual specificity phosphatase 18##NM_152511|DUSP18|150290|dual specificity phosphatase 18	0.999646	CTCF.p2:-15:1.000
chr10	98970368	98970497	reg1002866.p1	15.055	+	AB017167 TSC_hg19_v1_chr10_-_98945702 BC028105 AB011537 BC146761 NM_003061 BC139909	-24747	-	TSC_hg19_v1_chr10_-_98945606 BC146851	-24837	-	AY029183 AB383997 TSC_hg19_v1_chr10_-_98945570	-24958	-	TSC_hg19_v1_chr10_-_99052389 AK090447 AK303055	81942	-	TSC_hg19_v1_chr10_-_99052395 AY336750 DQ338460 BX648189 BC113888 BC114490 CR749412	81977	-	BX648194 NM_001204300 NM_032900 TSC_hg19_v1_chr10_-_99052429	82007	-	AB017167|SLIT1|6585|slit homolog 1 (Drosophila)##BC028105|SLIT1|6585|slit homolog 1 (Drosophila)##AB011537|SLIT1|6585|slit homolog 1 (Drosophila)##BC146761|SLIT1|6585|slit homolog 1 (Drosophila)##NM_003061|SLIT1|6585|slit homolog 1 (Drosophila)##BC139909|SLIT1|6585|slit homolog 1 (Drosophila)##BC146851|SLIT1|6585|slit homolog 1 (Drosophila)##AY029183|SLIT1|6585|slit homolog 1 (Drosophila)##AK090447|ARHGAP19|84986|Rho GTPase activating protein 19##AK303055|ARHGAP19|84986|Rho GTPase activating protein 19##AY336750|ARHGAP19-SLIT1|100533184|ARHGAP19-SLIT1 readthrough##DQ338460|ARHGAP19|84986|Rho GTPase activating protein 19##BX648189|ARHGAP19|84986|Rho GTPase activating protein 19##BC113888|ARHGAP19|84986|Rho GTPase activating protein 19##BC114490|ARHGAP19|84986|Rho GTPase activating protein 19##CR749412|ARHGAP19|84986|Rho GTPase activating protein 19##BX648194|ARHGAP19|84986|Rho GTPase activating protein 19##NM_001204300|ARHGAP19|84986|Rho GTPase activating protein 19##NM_032900|ARHGAP19|84986|Rho GTPase activating protein 19	0.996146	CTCF.p2:3:0.996
chr2	43358806	43358953	reg1002343.p1	15.055	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-339128	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-367579	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-562982	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	94466	-	TSC_hg19_v1_chr2_-_43453736 BC020369	94851	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	94863	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.94085	CTCF.p2:-10:0.941
chr11	47956126	47956271	reg1003089.p1	15.054	+	TSC_hg19_v1_chr11_-_47869903 BC125227 BC125228 BC009822 NM_015231	-86220	-	AB385295 D83781 TSC_hg19_v1_chr11_-_47869883 AK026236 BX647634 AK302396 AK304308 AL832029	-86317	-	EU832174 EU832267 TSC_hg19_v1_chr11_-_47788867 AK054636 BC037404 BC006557 NM_015308 AB023231	-167246	-	TSC_hg19_v1_chr11_+_48002110 NM_001098503 NM_002843 U10886	45893	+	D37781 TSC_hg19_v1_chr11_+_48002120	45922	+	TSC_hg19_v1_chr11_+_48002270 AL359057 BC063417	46161	+	BC125227|NUP160|23279|nucleoporin 160kDa##BC125228|NUP160|23279|nucleoporin 160kDa##BC009822|NUP160|23279|nucleoporin 160kDa##NM_015231|NUP160|23279|nucleoporin 160kDa##D83781|NUP160|23279|nucleoporin 160kDa##AK026236|NUP160|23279|nucleoporin 160kDa##BX647634|NUP160|23279|nucleoporin 160kDa##AK302396|NUP160|23279|nucleoporin 160kDa##AK304308|NUP160|23279|nucleoporin 160kDa##AL832029|NUP160|23279|nucleoporin 160kDa##EU832174|FNBP4|23360|formin binding protein 4##EU832267|FNBP4|23360|formin binding protein 4##AK054636|FNBP4|23360|formin binding protein 4##BC037404|FNBP4|23360|formin binding protein 4##BC006557|FNBP4|23360|formin binding protein 4##NM_015308|FNBP4|23360|formin binding protein 4##AB023231|FNBP4|23360|formin binding protein 4##NM_001098503|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_002843|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##U10886|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##D37781|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##AL359057|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##BC063417|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J	0.951042	CTCF.p2:-22:0.951
chr1	150532523	150532657	reg1002581.p1	15.054	+	TSC_hg19_v1_chr1_+_150521883 AF289612 NM_019032 NM_025008	-10736	+	AK292435 TSC_hg19_v1_chr1_+_150480584 AK301369 AK316390 AK302279 U65932 DQ893011 DQ896257	-51956	+	NM_001202858 NM_004425 NM_022664 TSC_hg19_v1_chr1_+_150480582 AK097205 AK097046 BC023505 DQ010946 DQ112074 U68186 U68187	-52056	+	AB385142 AF203373 BT006640 CU677857 DQ890628 DQ893795 FJ917536 TSC_hg19_v1_chr1_-_150552076 AF118124 BC017197 BC071897 L08246 AK300499 BC107735 AK294462	19450	-	TSC_hg19_v1_chr1_-_150552077 AK316267 AK297217 AK304775 AK312508	19491	-	TSC_hg19_v1_chr1_-_150552129 NM_001197320 NM_021960 NM_182763	19580	-	AF289612|ADAMTSL4|54507|ADAMTS-like 4##NM_019032|ADAMTSL4|54507|ADAMTS-like 4##NM_025008|ADAMTSL4|54507|ADAMTS-like 4##AK292435|ECM1|1893|extracellular matrix protein 1##AK301369|ECM1|1893|extracellular matrix protein 1##AK316390|ECM1|1893|extracellular matrix protein 1##AK302279|ECM1|1893|extracellular matrix protein 1##U65932|ECM1|1893|extracellular matrix protein 1##DQ893011|ECM1|1893|extracellular matrix protein 1##DQ896257|ECM1|1893|extracellular matrix protein 1##NM_001202858|ECM1|1893|extracellular matrix protein 1##NM_004425|ECM1|1893|extracellular matrix protein 1##NM_022664|ECM1|1893|extracellular matrix protein 1##AK097205|ECM1|1893|extracellular matrix protein 1##AK097046|ECM1|1893|extracellular matrix protein 1##BC023505|ECM1|1893|extracellular matrix protein 1##U68186|ECM1|1893|extracellular matrix protein 1##U68187|ECM1|1893|extracellular matrix protein 1##AF203373|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BT006640|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##DQ890628|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##DQ893795|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##FJ917536|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AF118124|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC017197|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC071897|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##L08246|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK300499|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC107735|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK294462|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK316267|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK297217|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK304775|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK312508|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_001197320|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_021960|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_182763|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)	0.995671	CTCF.p2:-17:0.996
chr17	35062710	35062830	reg1002840.p1	15.054	+	AK292307 NM_024864 BC072411	-104719	+	TSC_hg19_v1_chr17_+_34948329 NM_024308 AK315735 AY358712 BC002731	-114482	+	TSC_hg19_v1_chr17_+_34901498 AK290687 AF126964	-161258	+	BC084573 TSC_hg19_v1_chr17_-_35293961	231170	-	BC020470 NM_005568	232001	+	AK057229 NM_012138 TSC_hg19_v1_chr17_+_35306253 AF083208 BC000591 AJ249940 AB385572 CU674286 DQ892097 DQ895290	243529	+	AK292307|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024864|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##BC072411|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024308|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK315735|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AY358712|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##BC002731|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK290687|GGNBP2|79893|gametogenetin binding protein 2##AF126964|GGNBP2|79893|gametogenetin binding protein 2##BC020470|LHX1|3975|LIM homeobox 1##NM_005568|LHX1|3975|LIM homeobox 1##AK057229|AATF|26574|apoptosis antagonizing transcription factor##NM_012138|AATF|26574|apoptosis antagonizing transcription factor##AF083208|AATF|26574|apoptosis antagonizing transcription factor##BC000591|AATF|26574|apoptosis antagonizing transcription factor##AJ249940|AATF|26574|apoptosis antagonizing transcription factor##DQ892097|AATF|26574|apoptosis antagonizing transcription factor##DQ895290|AATF|26574|apoptosis antagonizing transcription factor	0.967872	CTCF.p2:5:0.330	CTCF.p2:-6:0.638
chr18	32586089	32586219	reg1002642.p1	15.054	+	NM_001143827 AK294833 TSC_hg19_v1_chr18_+_32558384	-27854	+	NM_001143826 TSC_hg19_v1_chr18_+_32557008	-29195	+	FJ535564 FJ535565 NM_001198942 NM_001198944 NM_032980 NM_032981 AK295732 U46746 AK295789 U26743 AK315215	-187836	+	TSC_hg19_v1_chr18_+_32621374 NM_014268 AK090945 AX746696 AK315766 BC007318 AB016823 AB528177 AM393705 BT020086 CR536545 CU675609 DQ892923 DQ896172 AK296251	35302	+	TSC_hg19_v1_chr18_+_32821018 NM_001135178 NM_032347 AF533250 AY157641 AK311533 AK027384 BC006172	234892	+	TSC_hg19_v1_chr18_-_32870201 AX721137 AK131291 AK128697 AY234408 AK303447 NM_001112734 NM_001166012	284018	-	NM_001143827|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK294833|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##FJ535564|DTNA|1837|dystrobrevin, alpha##FJ535565|DTNA|1837|dystrobrevin, alpha##NM_001198942|DTNA|1837|dystrobrevin, alpha##NM_001198944|DTNA|1837|dystrobrevin, alpha##NM_032980|DTNA|1837|dystrobrevin, alpha##NM_032981|DTNA|1837|dystrobrevin, alpha##AK295732|DTNA|1837|dystrobrevin, alpha##U46746|DTNA|1837|dystrobrevin, alpha##AK295789|DTNA|1837|dystrobrevin, alpha##U26743|DTNA|1837|dystrobrevin, alpha##AK315215|DTNA|1837|dystrobrevin, alpha##NM_014268|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK090945|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK315766|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##BC007318|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AB016823|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AM393705|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##BT020086|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##CR536545|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##DQ892923|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##DQ896172|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK296251|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001135178|ZNF397|84307|zinc finger protein 397##NM_032347|ZNF397|84307|zinc finger protein 397##AF533250|ZNF397|84307|zinc finger protein 397##AY157641|ZNF397|84307|zinc finger protein 397##AK311533|ZNF397|84307|zinc finger protein 397##AK027384|ZNF397|84307|zinc finger protein 397##BC006172|ZNF397|84307|zinc finger protein 397##AK131291|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK128697|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AY234408|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK303447|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##NM_001112734|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##NM_001166012|ZSCAN30|100101467|zinc finger and SCAN domain containing 30	0.985538	CTCF.p2:-16:0.986
chr9	129160860	129160989	reg1003032.p1	15.053	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-71757	+	AK309713 NM_001134778	-650447	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-651224	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	215837	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	406386	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	462020	+	NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34	0.92745	CTCF.p2:21:0.927
chr12	10388488	10388620	reg1003202.p1	15.051	+	AF287012 TSC_hg19_v1_chr12_+_10365506 AF087847 AK303581 AK315418 AK074195 BC028315 NM_031412 BC009309 AL136676 BX648781 BC008891	-23078	+	NM_153022 AY358845 AK055728	-56961	+	AB102861 AB590414 CU692540 DQ891409 DQ894585 AF035776 AK292124 AK295409 AK298040 BC022295 BC055085 AB010710 AK308009 NM_001172632 NM_001172633 NM_002543	-63822	-	AK291506 AY227806 NM_001114396	68492	+	NM_002262 NM_007334 AF498040 AF498041 AY327501 U30610 BC028009 AB009597 AJ000001	71978	+	BC039836 AK226161 AK292059 NM_007360	154080	-	AF287012|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AF087847|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK303581|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK315418|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK074195|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC028315|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##NM_031412|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC009309|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AL136676|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BX648781|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC008891|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##NM_153022|C12orf59|120939|chromosome 12 open reading frame 59##AY358845|C12orf59|120939|chromosome 12 open reading frame 59##AK055728|C12orf59|120939|chromosome 12 open reading frame 59##AB102861|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##DQ891409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##DQ894585|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AF035776|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK292124|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK295409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK298040|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##BC022295|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##BC055085|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AB010710|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK308009|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_001172632|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_001172633|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_002543|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK291506|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AY227806|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_001114396|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_002262|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_007334|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AF498040|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AF498041|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AY327501|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##U30610|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##BC028009|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AB009597|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AJ000001|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##BC039836|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AK226161|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AK292059|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##NM_007360|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1	0.999333	CTCF.p2:-3:0.999
chr20	42939865	42940001	reg1003027.p1	15.051	+	TSC_hg19_v1_chr20_-_42939843 BC029662 BC130446 BC136640 NM_001080472	-115	-	AF123765 BC009014 TSC_hg19_v1_chr20_+_42875960 CU679231 AK297348	-63957	+	AF277566 TSC_hg19_v1_chr20_+_42875947 AK299259 AK293484 AK299700 AF123764	-63986	+	NM_178491	25692	+	TSC_hg19_v1_chr20_+_42984088 AK096973	44160	+	TSC_hg19_v1_chr20_+_42984338 AY680696 AY680697 AY680698 NM_001030003 NM_001030004 NM_175914 FJ608822 HQ692868	44458	+	BC029662|FITM2|128486|fat storage-inducing transmembrane protein 2##BC130446|FITM2|128486|fat storage-inducing transmembrane protein 2##BC136640|FITM2|128486|fat storage-inducing transmembrane protein 2##NM_001080472|FITM2|128486|fat storage-inducing transmembrane protein 2##AF123765|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##BC009014|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AK297348|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AF277566|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AK299259|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AK293484|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AK299700|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AF123764|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##NM_178491|R3HDML|140902|R3H domain containing-like##AK096973|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AY680696|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AY680697|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AY680698|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_001030003|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_001030004|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_175914|HNF4A|3172|hepatocyte nuclear factor 4, alpha##FJ608822|HNF4A|3172|hepatocyte nuclear factor 4, alpha##HQ692868|HNF4A|3172|hepatocyte nuclear factor 4, alpha	0.800003	CTCF.p2:17:0.739
chr4	102090526	102090651	reg1002103.p1	15.050	+	CU676062 AB590686 AB034695 AK222741 AK304568 AK291831 BC017781 AF205940 AK026875 AK313504 NM_001159694 NM_016242	-651428	-	AL832277 BC013592 TSC_hg19_v1_chr4_-_101111626 AK312926 AK094236 NM_145244	-978958	-	TSC_hg19_v1_chr4_+_100871641 AK123926	-1218942	+	AB385587 AB451338 AB451487 AM393486 AM393713 CU693026 AY904364 BC025714 TSC_hg19_v1_chr4_-_102268080 L14778	177438	-	TSC_hg19_v1_chr4_-_102268343 AL353950	177784	-	AK290532 TSC_hg19_v1_chr4_-_102268547	177927	-	AB034695|EMCN|51705|endomucin##AK222741|EMCN|51705|endomucin##AK304568|EMCN|51705|endomucin##AK291831|EMCN|51705|endomucin##BC017781|EMCN|51705|endomucin##AF205940|EMCN|51705|endomucin##AK026875|EMCN|51705|endomucin##AK313504|EMCN|51705|endomucin##NM_001159694|EMCN|51705|endomucin##NM_016242|EMCN|51705|endomucin##AL832277|DDIT4L|115265|DNA-damage-inducible transcript 4-like##BC013592|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK312926|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK094236|DDIT4L|115265|DNA-damage-inducible transcript 4-like##NM_145244|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK123926|LOC256880|256880|uncharacterized LOC256880##AB451338|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AB451487|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393486|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393713|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AY904364|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##BC025714|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##L14778|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AL353950|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AK290532|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	0.846261	CTCF.p2:-22:0.846
chr11	128042340	128042465	reg1002965.p1	15.049	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1169097	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1171677	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1171742	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	349561	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	349732	-	BX640634 NM_001143820	415050	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.8884	CTCF.p2:-15:0.888
chr1	100929385	100929533	reg1003176.p1	15.048	+	BC071578 TSC_hg19_v1_chr1_+_100818053 AF064103 AK310657 AF000367	-111356	+	TSC_hg19_v1_chr1_+_100818040 AF064102	-111419	+	TSC_hg19_v1_chr1_+_100818021 NM_003672 NM_033312 NM_033313	-111442	+	AB042410 BC036775 NM_022049	74250	+	AK225748 TSC_hg19_v1_chr1_+_101004594	75069	+	NM_001078 NM_001199834 NM_080682 TSC_hg19_v1_chr1_+_101185297 AK223266 AK291732 AK296692 BC068490 M30257 BC017276 BC085003 M60335 AB590609 EU831989 EU832082 X53051 CU686647	255847	+	BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF064102|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AB042410|GPR88|54112|G protein-coupled receptor 88##BC036775|GPR88|54112|G protein-coupled receptor 88##NM_022049|GPR88|54112|G protein-coupled receptor 88##AK225748|GPR88|54112|G protein-coupled receptor 88##NM_001078|VCAM1|7412|vascular cell adhesion molecule 1##NM_001199834|VCAM1|7412|vascular cell adhesion molecule 1##NM_080682|VCAM1|7412|vascular cell adhesion molecule 1##AK223266|VCAM1|7412|vascular cell adhesion molecule 1##AK291732|VCAM1|7412|vascular cell adhesion molecule 1##AK296692|VCAM1|7412|vascular cell adhesion molecule 1##BC068490|VCAM1|7412|vascular cell adhesion molecule 1##M30257|VCAM1|7412|vascular cell adhesion molecule 1##BC017276|VCAM1|7412|vascular cell adhesion molecule 1##BC085003|VCAM1|7412|vascular cell adhesion molecule 1##M60335|VCAM1|7412|vascular cell adhesion molecule 1##EU831989|VCAM1|7412|vascular cell adhesion molecule 1##EU832082|VCAM1|7412|vascular cell adhesion molecule 1##X53051|VCAM1|7412|vascular cell adhesion molecule 1	0.022582	
chr12	89855668	89855805	reg1003064.p1	15.046	+	TSC_hg19_v1_chr12_-_89746275 BC037236 AK091753 AB189400 NM_001946 NM_022652	-109427	-	TSC_hg19_v1_chr12_-_89746238 BC005047	-109496	-	TSC_hg19_v1_chr12_-_89746181 BC003143 BC003562 AB013382 AB013602 X93920 AK222882	-109645	-	TSC_hg19_v1_chr12_-_89918537 AK312870 BC036390 NM_003774	62820	-	TSC_hg19_v1_chr12_-_89919208 AK123106 NM_001199777	63526	-	CU693124 TSC_hg19_v1_chr12_-_89919778 BX647258 AK074772 AK295596 BC026080 EF011619	64024	-	BC037236|DUSP6|1848|dual specificity phosphatase 6##AK091753|DUSP6|1848|dual specificity phosphatase 6##AB189400|DUSP6|1848|dual specificity phosphatase 6##NM_001946|DUSP6|1848|dual specificity phosphatase 6##NM_022652|DUSP6|1848|dual specificity phosphatase 6##BC005047|DUSP6|1848|dual specificity phosphatase 6##BC003143|DUSP6|1848|dual specificity phosphatase 6##BC003562|DUSP6|1848|dual specificity phosphatase 6##AB013382|DUSP6|1848|dual specificity phosphatase 6##AB013602|DUSP6|1848|dual specificity phosphatase 6##X93920|DUSP6|1848|dual specificity phosphatase 6##AK222882|DUSP6|1848|dual specificity phosphatase 6##AK312870|GALNT4|8693|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)##BC036390|GALNT4|8693|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)##NM_003774|GALNT4|8693|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)##AK123106|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##NM_001199777|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BX647258|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##AK074772|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK295596|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BC026080|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##EF011619|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)	0.988655	CTCF.p2:5:0.989
chr2	219137527	219137652	reg1003336.p1	15.044	+	AF318057 AF417001 NM_001077399 NM_015488 AK289867 TSC_hg19_v1_chr2_+_219135241 BC036457 AY039043 BC021118 AL080092 CU676836 EU831585 EU831670 AB033010	-2396	+	AK131047 TSC_hg19_v1_chr2_-_219134886 NM_001087	-2709	-	TSC_hg19_v1_chr2_-_219134861 BC039866 CR456755 M95627	-2735	-	TSC_hg19_v1_chr2_-_219157237 AF193045 BC007980 AK095270 AK300597 AK298123 BC026348 AK130713 AK298500 BC026693 AK130380 BC013428 NM_022152	19666	-	TSC_hg19_v1_chr2_+_219187970 NM_022572	50326	+	TSC_hg19_v1_chr2_+_219188021 AY358753 CU678300 AM393075 AM393168 BC002937 AK309308	50448	+	AF318057|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AF417001|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##NM_001077399|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##NM_015488|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK289867|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC036457|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AY039043|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC021118|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AL080092|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##EU831585|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##EU831670|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AB033010|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK131047|AAMP|14|angio-associated, migratory cell protein##NM_001087|AAMP|14|angio-associated, migratory cell protein##BC039866|AAMP|14|angio-associated, migratory cell protein##CR456755|AAMP|14|angio-associated, migratory cell protein##M95627|AAMP|14|angio-associated, migratory cell protein##AF193045|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC007980|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK300597|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK298123|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC026348|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK130713|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK298500|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC026693|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK130380|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC013428|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##NM_022152|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##NM_022572|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AY358753|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AM393075|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AM393168|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC002937|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK309308|PNKD|25953|paroxysmal nonkinesigenic dyskinesia	0.952633	CTCF.p2:-19:0.953
chr21	43758050	43758204	reg1003663.p1	15.042	+	NM_003226 AF432265	-22395	-	L08044 DQ891963 DQ895153 L15203 BC017859 TSC_hg19_v1_chr21_-_43735520	-22636	-	TSC_hg19_v1_chr21_+_43710190 AF038175	-47914	+	X51698 BC032820 NM_005423	13011	-	M12075 BC032811 NM_003225 X00474 X52003	28495	-	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	58034	-	NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##L08044|TFF3|7033|trefoil factor 3 (intestinal)##DQ891963|TFF3|7033|trefoil factor 3 (intestinal)##DQ895153|TFF3|7033|trefoil factor 3 (intestinal)##L15203|TFF3|7033|trefoil factor 3 (intestinal)##BC017859|TFF3|7033|trefoil factor 3 (intestinal)##AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3	0.554112	CTCF.p2:3:0.554
chr2	238653772	238653900	reg1002720.p1	15.042	+	TSC_hg19_v1_chr2_+_238601052 EU832771 EU832772 GQ129315 GQ129316	-52761	+	TSC_hg19_v1_chr2_+_238600975 AJ223075 BC001385 AK298270 U69609 BC108913 BC108914 AK307485	-52893	+	TSC_hg19_v1_chr2_+_238600798 BC018883 BC019335 NM_001137551 NM_001137552 NM_001137553 NM_004735	-53029	+	NM_001080504 TSC_hg19_v1_chr2_+_238707424 BX648107	53584	+	NM_005855 TSC_hg19_v1_chr2_+_238768265 AJ001014 BC000548 DQ891905 DQ895091 AY265457 CR542032 CR542044	114416	+	NM_080678 TSC_hg19_v1_chr2_+_238875655 AK002119 AK293334 AK297502 AK303094	221788	+	EU832771|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##EU832772|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129315|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129316|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AJ223075|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC001385|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK298270|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##U69609|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108913|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108914|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK307485|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC018883|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC019335|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137551|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137552|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137553|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_004735|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001080504|RBM44|375316|RNA binding motif protein 44##BX648107|RBM44|375316|RNA binding motif protein 44##NM_005855|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##AJ001014|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##BC000548|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##DQ891905|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##DQ895091|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##AY265457|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##CR542032|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##CR542044|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##NM_080678|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK293334|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK297502|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK303094|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)	0.999773	CTCF.p2:4:1.000
chr4	39137051	39137158	reg1001328.p1	15.041	+	AK289785 NM_015990 NM_199039	-73253	+	TSC_hg19_v1_chr4_+_39046535 NM_001007075 NM_001171654 BC053860 AB208820	-90666	+	BC030803 BC060512 AK026888 NM_024943	-103094	-	AY029257 NM_025132 TSC_hg19_v1_chr4_+_39184150 AK308803 AK026780 AK225588 AK294730 AK304161 BC032578	46991	+	AF040250 BC035297 TSC_hg19_v1_chr4_-_39367983 BC051751 AK291612 BC010387 AJ564999 NM_001204747 NM_002913	230848	-	AB079373 NM_175737 TSC_hg19_v1_chr4_+_39408496	271380	+	AK289785|KLHL5|51088|kelch-like 5 (Drosophila)##NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)##NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)##NM_001007075|KLHL5|51088|kelch-like 5 (Drosophila)##NM_001171654|KLHL5|51088|kelch-like 5 (Drosophila)##BC053860|KLHL5|51088|kelch-like 5 (Drosophila)##AB208820|KLHL5|51088|kelch-like 5 (Drosophila)##BC030803|TMEM156|80008|transmembrane protein 156##BC060512|TMEM156|80008|transmembrane protein 156##AK026888|TMEM156|80008|transmembrane protein 156##NM_024943|TMEM156|80008|transmembrane protein 156##AY029257|WDR19|57728|WD repeat domain 19##NM_025132|WDR19|57728|WD repeat domain 19##AK308803|WDR19|57728|WD repeat domain 19##AK026780|WDR19|57728|WD repeat domain 19##AK225588|WDR19|57728|WD repeat domain 19##AK294730|WDR19|57728|WD repeat domain 19##AK304161|WDR19|57728|WD repeat domain 19##BC032578|WDR19|57728|WD repeat domain 19##AF040250|RFC1|5981|replication factor C (activator 1) 1, 145kDa##BC035297|RFC1|5981|replication factor C (activator 1) 1, 145kDa##BC051751|RFC1|5981|replication factor C (activator 1) 1, 145kDa##AK291612|RFC1|5981|replication factor C (activator 1) 1, 145kDa##BC010387|RFC1|5981|replication factor C (activator 1) 1, 145kDa##AJ564999|RFC1|5981|replication factor C (activator 1) 1, 145kDa##NM_001204747|RFC1|5981|replication factor C (activator 1) 1, 145kDa##NM_002913|RFC1|5981|replication factor C (activator 1) 1, 145kDa##AB079373|KLB|152831|klotho beta##NM_175737|KLB|152831|klotho beta	0.356398	CTCF.p2:17:0.356
chr17	19669902	19670031	reg1002857.p1	15.040	+	BC021194 BC008892 BC004370 AK314584 AK225513 M74542 AK093877 AX748347 AK225505 BC004102 NM_000691	-18301	-	NM_001135167	-21042	-	AK292193 NM_001135168	-21195	-	TSC_hg19_v1_chr17_-_19771250 BC034988 AB014523 NM_001142610 NM_014683 BC039310	101177	-	AB590263 CU677815 DQ270159 DQ891477 DQ894666 TSC_hg19_v1_chr17_-_19881134 AK312438 BC017055 AF037439 NM_007202	211096	-	TSC_hg19_v1_chr17_-_19881144 AK295180	211192	-	BC021194|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##BC008892|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##BC004370|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK314584|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK225513|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##M74542|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK093877|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK225505|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##BC004102|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##NM_000691|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##NM_001135167|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK292193|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##NM_001135168|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##BC034988|ULK2|9706|unc-51-like kinase 2 (C. elegans)##AB014523|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_001142610|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_014683|ULK2|9706|unc-51-like kinase 2 (C. elegans)##BC039310|ULK2|9706|unc-51-like kinase 2 (C. elegans)##DQ270159|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ891477|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ894666|AKAP10|11216|A kinase (PRKA) anchor protein 10##AK312438|AKAP10|11216|A kinase (PRKA) anchor protein 10##BC017055|AKAP10|11216|A kinase (PRKA) anchor protein 10##AF037439|AKAP10|11216|A kinase (PRKA) anchor protein 10##NM_007202|AKAP10|11216|A kinase (PRKA) anchor protein 10##AK295180|AKAP10|11216|A kinase (PRKA) anchor protein 10	0.985013	CTCF.p2:9:0.985
chr22	22549871	22550019	reg1002064.p1	15.040	+	TSC_hg19_v1_chr22_+_22385369 AF026922	-164580	+	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	-212759	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	-212798	-	X02422 TSC_hg19_v1_chr22_+_22550141	184	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	233	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	19319	+	AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57	2.18236	CTCF.p2:28:0.826	CTCF.p2:-35:0.980	CTCF.p2:51:0.377
chr17	17545245	17545363	reg1003065.p1	15.039	+	TSC_hg19_v1_chr17_-_17495007 CU690728 AF044214 AF113126 BC000557 BC050593 NM_148172 AK302251	-50329	-	AB029821 NM_007169 TSC_hg19_v1_chr17_-_17485751	-59557	-	AF176806 TSC_hg19_v1_chr17_-_17485724	-59597	-	TSC_hg19_v1_chr17_+_17584772 AB058723 AY172136 NM_030665	39481	+	TSC_hg19_v1_chr17_+_17608164 AF147359	62894	+	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	181600	-	AF044214|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF113126|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC000557|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC050593|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_148172|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AK302251|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AB029821|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_007169|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF176806|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AB058723|RAI1|10743|retinoic acid induced 1##AY172136|RAI1|10743|retinoic acid induced 1##NM_030665|RAI1|10743|retinoic acid induced 1##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1	0.989023	CTCF.p2:8:0.989
chr17	40268839	40268962	reg1002202.p2	15.039	+	BC014949 AK296840 AK300900 AK021416 AK225549 NM_024119	-4182	-	NM_001242704	-78857	-	TSC_hg19_v1_chr17_+_40172124 AK027265 AK297975 AK054571 BC007316 BC007450	-96754	+	TSC_hg19_v1_chr17_-_40273386 AB527835 AF029777 BC032743 BC105977 BC039907 NM_021078	4449	-	NM_033194 BC093991 BC093993 AK130947	5901	+	TSC_hg19_v1_chr17_-_40306986 U18420	38061	-	BC014949|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK296840|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK300900|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK021416|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK225549|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_024119|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_001242704|ZNF385C|201181|zinc finger protein 385C##AK027265|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK297975|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK054571|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007316|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007450|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AF029777|KAT2A|2648|K(lysine) acetyltransferase 2A##BC032743|KAT2A|2648|K(lysine) acetyltransferase 2A##BC105977|KAT2A|2648|K(lysine) acetyltransferase 2A##BC039907|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_021078|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_033194|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093991|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093993|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##AK130947|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##U18420|RAB5C|5878|RAB5C, member RAS oncogene family	0.993328	CTCF.p2:13:0.993
chr2	26214556	26214669	reg1001483.p1	15.036	+	TSC_hg19_v1_chr2_-_26205437 NM_002254	-9172	-	BC092406 TSC_hg19_v1_chr2_-_26205366 AK293738 AK315324 BC042486 BX571741	-9265	-	TSC_hg19_v1_chr2_-_26101329 BX648218 CR933613 BX647527	-113189	-	NM_016131 TSC_hg19_v1_chr2_+_26256952 AL136650 AK023223	42242	+	AF086917 AF106681 BC000896 AB529109 AF297660 AF498945 CR457303 EU831649 EU831733 TSC_hg19_v1_chr2_+_26257540 AF091032	42855	+	AB124552 NM_001168241	181347	+	NM_002254|KIF3C|3797|kinesin family member 3C##BC092406|KIF3C|3797|kinesin family member 3C##AK293738|KIF3C|3797|kinesin family member 3C##AK315324|KIF3C|3797|kinesin family member 3C##BC042486|KIF3C|3797|kinesin family member 3C##BX571741|KIF3C|3797|kinesin family member 3C##BX648218|ASXL2|55252|additional sex combs like 2 (Drosophila)##CR933613|ASXL2|55252|additional sex combs like 2 (Drosophila)##BX647527|ASXL2|55252|additional sex combs like 2 (Drosophila)##NM_016131|RAB10|10890|RAB10, member RAS oncogene family##AL136650|RAB10|10890|RAB10, member RAS oncogene family##AK023223|RAB10|10890|RAB10, member RAS oncogene family##AF086917|RAB10|10890|RAB10, member RAS oncogene family##AF106681|RAB10|10890|RAB10, member RAS oncogene family##BC000896|RAB10|10890|RAB10, member RAS oncogene family##AF297660|RAB10|10890|RAB10, member RAS oncogene family##AF498945|RAB10|10890|RAB10, member RAS oncogene family##CR457303|RAB10|10890|RAB10, member RAS oncogene family##EU831649|RAB10|10890|RAB10, member RAS oncogene family##EU831733|RAB10|10890|RAB10, member RAS oncogene family##AF091032|RAB10|10890|RAB10, member RAS oncogene family##AB124552|FAM59B|150946|family with sequence similarity 59, member B##NM_001168241|FAM59B|150946|family with sequence similarity 59, member B	0.988935	CTCF.p2:-25:0.989
chr2	97523917	97524041	reg1001186.p2	15.036	+	TSC_hg19_v1_chr2_-_97523744 AB528054 CU689148 AF151034 BC031303 AB209367 AK312193 NM_016466	-237	-	AF492401 AY196212 BC107056 AK057011 AK092564 AX747600 NM_144994	-14234	-	TSC_hg19_v1_chr2_+_97482006 BC037272 AK126847 NM_017623 NM_199078 BC007199 AF216965 AK000025 CU675553	-41497	+	TSC_hg19_v1_chr2_-_97535634 BC109104 BC109103	11652	-	TSC_hg19_v1_chr2_-_97535818 AY358842 NM_017789	11782	-	AF151068 NM_001172667	36897	-	AF151034|ANKRD39|51239|ankyrin repeat domain 39##BC031303|ANKRD39|51239|ankyrin repeat domain 39##AK312193|ANKRD39|51239|ankyrin repeat domain 39##NM_016466|ANKRD39|51239|ankyrin repeat domain 39##AF492401|ANKRD23|200539|ankyrin repeat domain 23##AY196212|ANKRD23|200539|ankyrin repeat domain 23##BC107056|ANKRD23|200539|ankyrin repeat domain 23##AK057011|ANKRD23|200539|ankyrin repeat domain 23##AK092564|ANKRD23|200539|ankyrin repeat domain 23##NM_144994|ANKRD23|200539|ankyrin repeat domain 23##BC037272|CNNM3|26505|cyclin M3##AK126847|CNNM3|26505|cyclin M3##NM_017623|CNNM3|26505|cyclin M3##NM_199078|CNNM3|26505|cyclin M3##BC007199|CNNM3|26505|cyclin M3##AF216965|CNNM3|26505|cyclin M3##AK000025|CNNM3|26505|cyclin M3##BC109104|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##BC109103|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##AY358842|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##NM_017789|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##AF151068|FAM178B|51252|family with sequence similarity 178, member B##NM_001172667|FAM178B|51252|family with sequence similarity 178, member B	0.0	
chr10	3235182	3235300	reg1008494.p1	15.035	+	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-20236	-	CU678866 TSC_hg19_v1_chr10_-_3214975 AB384562 BC005025 AK225084 AK293788 AK315117 AK294865 AK299464 AK303406 BC095422 BX649017 AF061243	-20271	-	BC045577 TSC_hg19_v1_chr10_-_3214936	-20316	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	592070	-	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	592268	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1633177	+	BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC005025|PITRM1|10531|pitrilysin metallopeptidase 1##AK225084|PITRM1|10531|pitrilysin metallopeptidase 1##AK293788|PITRM1|10531|pitrilysin metallopeptidase 1##AK315117|PITRM1|10531|pitrilysin metallopeptidase 1##AK294865|PITRM1|10531|pitrilysin metallopeptidase 1##AK299464|PITRM1|10531|pitrilysin metallopeptidase 1##AK303406|PITRM1|10531|pitrilysin metallopeptidase 1##BC095422|PITRM1|10531|pitrilysin metallopeptidase 1##BX649017|PITRM1|10531|pitrilysin metallopeptidase 1##AF061243|PITRM1|10531|pitrilysin metallopeptidase 1##BC045577|PITRM1|10531|pitrilysin metallopeptidase 1##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2	0.960793	CTCF.p2:-13:0.961
chr10	75289244	75289379	reg1002763.p1	15.035	+	TSC_hg19_v1_chr10_-_75255763 M29550 M29551 BC028049 NM_001142353 NM_001142354 NM_021132	-33543	-	AJ488506 TSC_hg19_v1_chr10_-_75255746 BC035464	-33579	-	AB489159 TSC_hg19_v1_chr10_-_75255664 AK301582	-33641	-	AJ583820 NM_152586	46112	-	TSC_hg19_v1_chr10_-_75401273 AL359210 AF240633 AY013297 AK300683 AK308200	111937	-	TSC_hg19_v1_chr10_-_75401524 AJ278124 BC025753 NM_021245	112213	-	M29550|PPP3CB|5532|protein phosphatase 3, catalytic subunit, beta isozyme##M29551|PPP3CB|5532|protein phosphatase 3, catalytic subunit, beta isozyme##BC028049|PPP3CB|5532|protein phosphatase 3, catalytic subunit, beta isozyme##NM_001142353|PPP3CB|5532|protein phosphatase 3, catalytic subunit, beta isozyme##NM_001142354|PPP3CB|5532|protein phosphatase 3, catalytic subunit, beta isozyme##NM_021132|PPP3CB|5532|protein phosphatase 3, catalytic subunit, beta isozyme##AJ488506|PPP3CB|5532|protein phosphatase 3, catalytic subunit, beta isozyme##BC035464|PPP3CB|5532|protein phosphatase 3, catalytic subunit, beta isozyme##AK301582|PPP3CB|5532|protein phosphatase 3, catalytic subunit, beta isozyme##AJ583820|USP54|159195|ubiquitin specific peptidase 54##NM_152586|USP54|159195|ubiquitin specific peptidase 54##AL359210|MYOZ1|58529|myozenin 1##AF240633|MYOZ1|58529|myozenin 1##AY013297|MYOZ1|58529|myozenin 1##AK300683|MYOZ1|58529|myozenin 1##AK308200|MYOZ1|58529|myozenin 1##AJ278124|MYOZ1|58529|myozenin 1##BC025753|MYOZ1|58529|myozenin 1##NM_021245|MYOZ1|58529|myozenin 1	0.987844	CTCF.p2:-24:0.988
chr1	46035836	46035961	reg1002781.p1	15.035	+	TSC_hg19_v1_chr1_+_46016747 AK293083 BC005394	-19166	+	TSC_hg19_v1_chr1_+_46016568 BC000670 AK307237 AK307288	-19351	+	NM_001202413 NM_001202414 NM_006066 NM_153326 TSC_hg19_v1_chr1_+_46016497 AK311175 AK307068	-19410	+	NM_001195193 NM_002482 NM_152298 TSC_hg19_v1_chr1_+_46049716 AK056161 AK222778 AK222816 AK291637 AK298893 AK308001 AK299584 BC010105 BC011580 AF035191 M97856 BC009933 BC053608 BC003113 BT006757 DQ893275 DQ896606	13840	+	BC128177 BC128178 BC029888 BC065201 BC110988 AK310879 AK057646 AK303939 AK298104 NM_001114938 NM_001190182	53786	-	TSC_hg19_v1_chr1_-_46152195 BC068578 NM_021639	116344	-	AK293083|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##BC005394|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##BC000670|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307237|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307288|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_001202413|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_001202414|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_006066|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_153326|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307068|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_001195193|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##NM_002482|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##NM_152298|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK056161|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK222778|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK222816|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK291637|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK298893|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK308001|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK299584|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC010105|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC011580|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AF035191|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##M97856|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC009933|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC053608|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC003113|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BT006757|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##DQ893275|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##DQ896606|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC128177|CCDC17|149483|coiled-coil domain containing 17##BC128178|CCDC17|149483|coiled-coil domain containing 17##BC029888|CCDC17|149483|coiled-coil domain containing 17##BC065201|CCDC17|149483|coiled-coil domain containing 17##BC110988|CCDC17|149483|coiled-coil domain containing 17##AK310879|CCDC17|149483|coiled-coil domain containing 17##AK057646|CCDC17|149483|coiled-coil domain containing 17##AK303939|CCDC17|149483|coiled-coil domain containing 17##AK298104|CCDC17|149483|coiled-coil domain containing 17##NM_001114938|CCDC17|149483|coiled-coil domain containing 17##NM_001190182|CCDC17|149483|coiled-coil domain containing 17##BC068578|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1##NM_021639|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1	0.998806	CTCF.p2:17:0.999
chr17	65471636	65471759	reg1002733.p1	15.035	+	BC007905 NM_012417 NM_181671	-97774	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-98109	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-98288	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	242353	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	350005	+	AK293224 TSC_hg19_v1_chr17_+_65822221	350520	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.685477	CTCF.p2:5:0.685
chr10	112307027	112307167	reg1002787.p1	15.033	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-49346	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-242397	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-242504	-	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	20395	+	AF067163 TSC_hg19_v1_chr10_+_112344155	37018	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	97032	+	NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20	0.999552	CTCF.p2:18:1.000
chr2	12003875	12004006	reg1002033.p2	15.033	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-117165	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-193649	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-321097	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	853313	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	853976	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	854457	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.981242	CTCF.p2:-5:0.981
chr22	32477043	32477138	reg1001476.p1	15.033	+	TSC_hg19_v1_chr22_+_32439250 M24847 BC139838 BC139839 CU013176 CU013464 AB463272	-37832	+	TSC_hg19_v1_chr22_+_32439229 CR456579	-37867	+	TSC_hg19_v1_chr22_+_32439103 AK312948	-37977	+	BC139845 CU012997 CU013285 AB527618 CR456485 NM_001010859 BC040263	78164	-	BC069827 BC069737 AJ010231 NM_006605	112335	-	CR456563 NM_001159546	121426	-	M24847|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139838|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139839|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CU013176|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CU013464|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CR456579|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##AK312948|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139845|C22orf42|150297|chromosome 22 open reading frame 42##CR456485|C22orf42|150297|chromosome 22 open reading frame 42##NM_001010859|C22orf42|150297|chromosome 22 open reading frame 42##BC040263|C22orf42|150297|chromosome 22 open reading frame 42##BC069827|RFPL2|10739|ret finger protein-like 2##BC069737|RFPL2|10739|ret finger protein-like 2##AJ010231|RFPL2|10739|ret finger protein-like 2##NM_006605|RFPL2|10739|ret finger protein-like 2##CR456563|RFPL2|10739|ret finger protein-like 2##NM_001159546|RFPL2|10739|ret finger protein-like 2	0.543812	CTCF.p2:0:0.544
chr5	95672198	95672350	reg1003077.p1	15.033	+	TSC_hg19_v1_chr5_-_95297609 BC028412 NM_012081	-374589	-	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	-374776	-	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	-513754	-	AK308575 NM_001177876	76414	-	AK303888 NM_001177875	95588	-	AB208874 AB590528 BC130295 BC136486 TSC_hg19_v1_chr5_-_95768927 X64810 M90753 BC031211 NM_000439	96548	-	BC028412|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_012081|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AK303888|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177875|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AB208874|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC130295|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC136486|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##X64810|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##M90753|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC031211|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_000439|PCSK1|5122|proprotein convertase subtilisin/kexin type 1	0.965023	CTCF.p2:13:0.965
chr8	29197832	29197977	reg1002600.p1	15.033	+	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-77290	-	TSC_hg19_v1_chr8_+_28748135 AY522342 DQ269478 BC069242 NM_024567	-449777	+	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	-449987	+	AL137704 NM_057158	8417	-	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	10166	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	742570	-	BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AY522342|HMBOX1|79618|homeobox containing 1##DQ269478|HMBOX1|79618|homeobox containing 1##BC069242|HMBOX1|79618|homeobox containing 1##NM_024567|HMBOX1|79618|homeobox containing 1##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66	0.999849	CTCF.p2:-13:1.000
chr6	34954674	34954801	reg1003244.p1	15.032	+	TSC_hg19_v1_chr6_+_34857037 BC022396 NM_015245 D86982 BC031934 BC086310 AK298987 BC132832 BC144341 AB385297	-97637	+	AF118094 AB464280 BT019404 BT019405 CR542068 DQ893239 DQ896569 TSC_hg19_v1_chr6_-_34855820 AK313475 BC021972 D63705 AK302226 NM_005643 X83928	-99032	-	TSC_hg19_v1_chr6_+_34759872 AK000309 BC108710 BX640641 AB126777 BC137120 BC137127	-194848	+	AK057234 AK316403 AF536532 BC040003 BC033729 BC090050 AK301778 AK302022 TSC_hg19_v1_chr6_-_35109091 AK098590 AK301975 AK302456 AK302375 AK315078 BC048418 AF536533 NM_001093728 NM_018679	154357	-	TSC_hg19_v1_chr6_+_35181732 BC052263 AK291218	227131	+	TSC_hg19_v1_chr6_+_35182182 AF452494 NM_152753 EU832354 EU832439 AY639608	227451	+	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##AF118094|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BT019404|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BT019405|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##CR542068|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##DQ893239|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##DQ896569|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##AK313475|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BC021972|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##D63705|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##AK302226|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##NM_005643|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##X83928|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BX640641|UHRF1BP1|54887|UHRF1 binding protein 1##AB126777|UHRF1BP1|54887|UHRF1 binding protein 1##BC137120|UHRF1BP1|54887|UHRF1 binding protein 1##BC137127|UHRF1BP1|54887|UHRF1 binding protein 1##AK057234|TCP11|6954|t-complex 11 homolog (mouse)##AK316403|TCP11|6954|t-complex 11 homolog (mouse)##AF536532|TCP11|6954|t-complex 11 homolog (mouse)##BC040003|TCP11|6954|t-complex 11 homolog (mouse)##BC033729|TCP11|6954|t-complex 11 homolog (mouse)##BC090050|TCP11|6954|t-complex 11 homolog (mouse)##AK301778|TCP11|6954|t-complex 11 homolog (mouse)##AK302022|TCP11|6954|t-complex 11 homolog (mouse)##AK098590|TCP11|6954|t-complex 11 homolog (mouse)##AK301975|TCP11|6954|t-complex 11 homolog (mouse)##AK302456|TCP11|6954|t-complex 11 homolog (mouse)##AK302375|TCP11|6954|t-complex 11 homolog (mouse)##AK315078|TCP11|6954|t-complex 11 homolog (mouse)##BC048418|TCP11|6954|t-complex 11 homolog (mouse)##AF536533|TCP11|6954|t-complex 11 homolog (mouse)##NM_001093728|TCP11|6954|t-complex 11 homolog (mouse)##NM_018679|TCP11|6954|t-complex 11 homolog (mouse)##BC052263|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AK291218|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AF452494|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##NM_152753|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##EU832354|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##EU832439|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AY639608|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3	0.842511	CTCF.p2:-18:0.843
chr15	74615035	74615155	reg1002726.p1	15.031	+	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-4190	+	NM_025055 AK057417	-86391	+	AK299191 NM_001199040	-113050	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	43440	-	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	44908	-	NM_001146030 TSC_hg19_v1_chr15_-_74726050	110934	-	AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_025055|CCDC33|80125|coiled-coil domain containing 33##AK057417|CCDC33|80125|coiled-coil domain containing 33##AK299191|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001199040|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)	0.984996	CTCF.p2:12:0.985
chr7	129112261	129112431	reg1002071.p2	15.030	+	TSC_hg19_v1_chr7_+_129074283 NM_001134336 NM_020704 AK290165 BC019064 AB032996 CU676366 AB463039 AM392619 AM392944 AM392960 AM393447	-38073	+	AK316073 NM_001130722	-96863	+	TSC_hg19_v1_chr7_+_129008062 AK025372	-104258	+	BC050400 NM_001195243 BC035417	30018	+	TSC_hg19_v1_chr7_-_129251474 AK123679	139132	-	TSC_hg19_v1_chr7_+_129251531 NM_005011	139195	+	NM_001134336|FAM40B|57464|family with sequence similarity 40, member B##NM_020704|FAM40B|57464|family with sequence similarity 40, member B##AK290165|FAM40B|57464|family with sequence similarity 40, member B##BC019064|FAM40B|57464|family with sequence similarity 40, member B##AB032996|FAM40B|57464|family with sequence similarity 40, member B##AM392619|FAM40B|57464|family with sequence similarity 40, member B##AM392944|FAM40B|57464|family with sequence similarity 40, member B##AM392960|FAM40B|57464|family with sequence similarity 40, member B##AM393447|FAM40B|57464|family with sequence similarity 40, member B##AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2##BC050400|LOC100287482|100287482|uncharacterized LOC100287482##NM_001195243|LOC100287482|100287482|uncharacterized LOC100287482##BC035417|LOC100287482|100287482|uncharacterized LOC100287482##NM_005011|NRF1|4899|nuclear respiratory factor 1	0.863734	CTCF.p2:17:0.864
chr7	96657099	96657206	reg1000769.p2	15.028	+	BC006226 TSC_hg19_v1_chr7_-_96654144 AK023493 NM_005221 AK297614	-2958	-	NM_005222	-21863	+	TSC_hg19_v1_chr7_-_96633611 AK091367 AX746939 BC101445 BC101446 BC101447 BC101985 BC113049	-23541	-	BC028409 NM_020186	88752	+	TSC_hg19_v1_chr7_+_96747012 BC022858 AF201933 BC020621	89878	+	NM_003182 NM_013996 NM_013997 NM_013998 U37529 AK222957 BC018047 X54469	704200	+	BC006226|DLX5|1749|distal-less homeobox 5##AK023493|DLX5|1749|distal-less homeobox 5##NM_005221|DLX5|1749|distal-less homeobox 5##AK297614|DLX5|1749|distal-less homeobox 5##NM_005222|DLX6|1750|distal-less homeobox 6##AK091367|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101445|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101446|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101447|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101985|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC113049|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC022858|ACN9|57001|ACN9 homolog (S. cerevisiae)##AF201933|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC020621|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_003182|TAC1|6863|tachykinin, precursor 1##NM_013996|TAC1|6863|tachykinin, precursor 1##NM_013997|TAC1|6863|tachykinin, precursor 1##NM_013998|TAC1|6863|tachykinin, precursor 1##U37529|TAC1|6863|tachykinin, precursor 1##AK222957|TAC1|6863|tachykinin, precursor 1##BC018047|TAC1|6863|tachykinin, precursor 1##X54469|TAC1|6863|tachykinin, precursor 1	0.462247	CTCF.p2:5:0.462
chr3	36910457	36910599	reg1003218.p1	15.026	+	NM_033403	-129177	-	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	-488476	+	BC017805 NM_198399 BC066651 BC036548	-1188069	+	TSC_hg19_v1_chr3_-_36986546 NM_014831	76042	-	AB385383 CU687938 TSC_hg19_v1_chr3_-_37034574	124043	-	TSC_hg19_v1_chr3_-_37034623 BC064696 AF059751 BC012624 AB018309 AY178832 NM_014805	124173	-	NM_033403|DCLK3|85443|doublecortin-like kinase 3##AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain##BC017805|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_198399|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC066651|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC036548|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1##BC064696|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AF059751|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##BC012624|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AB018309|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AY178832|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##NM_014805|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1	0.999673	CTCF.p2:13:1.000
chr17	18864247	18864387	reg1002890.p1	15.023	+	AK057946 NM_001042450 NM_152351 AK298345 BC062617 BC034380	-8813	+	NM_001243940 AB007851 BC101670 BC101672 BC143475	-95496	+	TSC_hg19_v1_chr17_+_18761445 BC106050 AK304544	-102847	+	TSC_hg19_v1_chr17_-_18908078 NM_001039999	43762	-	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	85969	-	BC157869 NM_001129778	166464	+	AK057946|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001042450|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_152351|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##AK298345|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC062617|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC034380|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001243940|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AB007851|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC101670|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC101672|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC143475|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC106050|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK304544|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like	0.998627	CTCF.p2:-9:0.999
chr19	1267053	1267191	reg1003246.p3	15.021	+	TSC_hg19_v1_chr19_+_1249886 BC060848 BC094778	-17238	+	TSC_hg19_v1_chr19_+_1248581 NM_177401	-18548	+	TSC_hg19_v1_chr19_+_1241811 BC050458 BC018079 CR542218	-25289	+	TSC_hg19_v1_chr19_+_1269330 NM_001280 AK095781 AK304185 AK304470 AK311601 AK128423 AF021336 AK094781 D78134 BC000901 BC000403	2183	+	CU674448 AB528491 EU176219 EU176522 AB451225 AB451348 BT007210 TSC_hg19_v1_chr19_+_1270968	3827	+	TSC_hg19_v1_chr19_+_1275540 NM_017914 BC000890 BC012080	8445	+	BC060848|MIDN|90007|midnolin##BC094778|MIDN|90007|midnolin##NM_177401|MIDN|90007|midnolin##BC050458|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC018079|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##CR542218|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001280|CIRBP|1153|cold inducible RNA binding protein##AK095781|CIRBP|1153|cold inducible RNA binding protein##AK304185|CIRBP|1153|cold inducible RNA binding protein##AK304470|CIRBP|1153|cold inducible RNA binding protein##AK311601|CIRBP|1153|cold inducible RNA binding protein##AK128423|CIRBP|1153|cold inducible RNA binding protein##AF021336|CIRBP|1153|cold inducible RNA binding protein##AK094781|CIRBP|1153|cold inducible RNA binding protein##D78134|CIRBP|1153|cold inducible RNA binding protein##BC000901|CIRBP|1153|cold inducible RNA binding protein##BC000403|CIRBP|1153|cold inducible RNA binding protein##EU176219|CIRBP|1153|cold inducible RNA binding protein##EU176522|CIRBP|1153|cold inducible RNA binding protein##AB451225|CIRBP|1153|cold inducible RNA binding protein##AB451348|CIRBP|1153|cold inducible RNA binding protein##BT007210|CIRBP|1153|cold inducible RNA binding protein##NM_017914|C19orf24|55009|chromosome 19 open reading frame 24##BC000890|C19orf24|55009|chromosome 19 open reading frame 24##BC012080|C19orf24|55009|chromosome 19 open reading frame 24	1.149628	CTCF.p2:0:0.998
chr3	14509693	14509791	reg1001898.p1	15.020	+	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	-65626	+	TSC_hg19_v1_chr3_+_14444072 AK303649	-65673	+	TSC_hg19_v1_chr3_+_14220355 AJ238095 AB463841 CR457185	-289391	+	NM_001080423	73845	-	TSC_hg19_v1_chr3_+_14693268 NM_016474 AK091158 AX746816 BC005199 BC033897 BC013999	183516	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	183541	+	NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AJ238095|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##CR457185|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2##NM_016474|C3orf19|51244|chromosome 3 open reading frame 19##AK091158|C3orf19|51244|chromosome 3 open reading frame 19##BC005199|C3orf19|51244|chromosome 3 open reading frame 19##BC033897|C3orf19|51244|chromosome 3 open reading frame 19##BC013999|C3orf19|51244|chromosome 3 open reading frame 19##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19	0.956293	CTCF.p2:19:0.956
chr14	104274888	104275012	reg1002882.p1	15.018	+	TSC_hg19_v1_chr14_+_104182144 NM_001198953 NM_024071 BC005999 AK057816 BC001130 AY395756 AK290519 BX248261	-92834	+	TSC_hg19_v1_chr14_-_104181759 AK022829 BC011725 BX161398 BC001036 AK023646 NM_001100118 NM_001100119 NM_005432	-93167	-	AK124498 TSC_hg19_v1_chr14_-_104178577	-96442	-	BC136527 AJ318887 TSC_hg19_v1_chr14_-_104313913 BC035446 NM_015316	38902	-	BX161388 TSC_hg19_v1_chr14_-_104387847 BC047289 BC063419 BC000429 BC001944	112895	-	AK310120 TSC_hg19_v1_chr14_-_104387867 AK309355 AK312099 AF054175 AK309499 DQ426862 NM_001127393 NM_004894	112929	-	NM_001198953|ZFYVE21|79038|zinc finger, FYVE domain containing 21##NM_024071|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BC005999|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK057816|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BC001130|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AY395756|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK290519|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BX248261|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK022829|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC011725|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BX161398|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC001036|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK023646|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100118|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100119|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_005432|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK124498|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC136527|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##AJ318887|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##BC035446|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##NM_015316|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##BX161388|C14orf2|9556|chromosome 14 open reading frame 2##BC047289|C14orf2|9556|chromosome 14 open reading frame 2##BC063419|C14orf2|9556|chromosome 14 open reading frame 2##BC000429|C14orf2|9556|chromosome 14 open reading frame 2##BC001944|C14orf2|9556|chromosome 14 open reading frame 2##AK310120|C14orf2|9556|chromosome 14 open reading frame 2##AK309355|C14orf2|9556|chromosome 14 open reading frame 2##AK312099|C14orf2|9556|chromosome 14 open reading frame 2##AF054175|C14orf2|9556|chromosome 14 open reading frame 2##AK309499|C14orf2|9556|chromosome 14 open reading frame 2##DQ426862|C14orf2|9556|chromosome 14 open reading frame 2##NM_001127393|C14orf2|9556|chromosome 14 open reading frame 2##NM_004894|C14orf2|9556|chromosome 14 open reading frame 2	0.997996	CTCF.p2:-16:0.998
chr3	58554411	58554544	reg1003094.p1	15.018	+	AK298402 AK313512 BC033517 BC047700 TSC_hg19_v1_chr3_-_58522918 NM_003500	-31577	-	AK074934 NM_153331	-70386	+	TSC_hg19_v1_chr3_+_58477822 NM_001128214 AK075297	-76639	+	AB023811 TSC_hg19_v1_chr3_-_58563116 BC010561 AL050264 AK055443 AK128791 BC093012	8632	-	AF035283 NM_001076778 NM_007177	9013	-	BC015359 TSC_hg19_v1_chr3_-_58652501 AK127546 NM_138805 AY358677	98044	-	AK298402|ACOX2|8309|acyl-CoA oxidase 2, branched chain##AK313512|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC033517|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC047700|ACOX2|8309|acyl-CoA oxidase 2, branched chain##NM_003500|ACOX2|8309|acyl-CoA oxidase 2, branched chain##AK074934|KCTD6|200845|potassium channel tetramerisation domain containing 6##NM_153331|KCTD6|200845|potassium channel tetramerisation domain containing 6##NM_001128214|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK075297|KCTD6|200845|potassium channel tetramerisation domain containing 6##AB023811|FAM107A|11170|family with sequence similarity 107, member A##BC010561|FAM107A|11170|family with sequence similarity 107, member A##AL050264|FAM107A|11170|family with sequence similarity 107, member A##AK055443|FAM107A|11170|family with sequence similarity 107, member A##AK128791|FAM107A|11170|family with sequence similarity 107, member A##BC093012|FAM107A|11170|family with sequence similarity 107, member A##AF035283|FAM107A|11170|family with sequence similarity 107, member A##NM_001076778|FAM107A|11170|family with sequence similarity 107, member A##NM_007177|FAM107A|11170|family with sequence similarity 107, member A##BC015359|FAM3D|131177|family with sequence similarity 3, member D##AK127546|FAM3D|131177|family with sequence similarity 3, member D##NM_138805|FAM3D|131177|family with sequence similarity 3, member D##AY358677|FAM3D|131177|family with sequence similarity 3, member D	0.999799	CTCF.p2:9:1.000
chr8	28221036	28221176	reg1002413.p1	15.018	+	NM_006228 U48263 TSC_hg19_v1_chr8_+_28174784 AK289633 AY335948 BC034758	-46381	+	NM_018091 TSC_hg19_v1_chr8_+_27950679 AK302140 AK296475 AK022626 AK295574 AK001284 AK293424 AK315985 AK316053 AK298265 BC001240 AL834273 AB463602 AM392633	-270449	+	AB075870 NM_001010906	-279719	-	BC001237 TSC_hg19_v1_chr8_-_28243694	22536	-	AK002050 AK023418 NM_018660 AB057659 AB073627	22855	-	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	126673	-	NM_006228|PNOC|5368|prepronociceptin##U48263|PNOC|5368|prepronociceptin##AK289633|PNOC|5368|prepronociceptin##AY335948|PNOC|5368|prepronociceptin##BC034758|PNOC|5368|prepronociceptin##NM_018091|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK302140|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK296475|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK022626|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK295574|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK001284|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK293424|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK315985|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK316053|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK298265|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##BC001240|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AL834273|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AM392633|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AB075870|C8orf80|389643|chromosome 8 open reading frame 80##NM_001010906|C8orf80|389643|chromosome 8 open reading frame 80##BC001237|ZNF395|55893|zinc finger protein 395##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16	0.016384	
chr12	8384407	8384535	reg1003059.p1	15.017	+	BC042608 AK001270 NM_018088	-4268	-	TSC_hg19_v1_chr12_+_8332811 AK096301 BC048994 AK311411 BC034777	-51645	+	NM_001004328	-59322	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	224131	+	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	281760	+	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	309003	-	BC042608|FAM90A1|55138|family with sequence similarity 90, member A1##AK001270|FAM90A1|55138|family with sequence similarity 90, member A1##NM_018088|FAM90A1|55138|family with sequence similarity 90, member A1##AK096301|FAM66C|440078|family with sequence similarity 66, member C##BC048994|FAM66C|440078|family with sequence similarity 66, member C##BC034777|FAM66C|440078|family with sequence similarity 66, member C##NM_001004328|ZNF705A|440077|zinc finger protein 705A##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E	1.568177	CTCF.p2:-9:0.581	CTCF.p2:28:0.987
chr8	12899960	12900082	reg1001948.p2	15.017	+	AB040889 NM_001099677	-30249	+	AK296010 NM_020844	-96855	+	TSC_hg19_v1_chr8_-_12612974 NM_152271	-287017	-	AK299049 NM_001164271	73731	-	DQ092384 DQ092383 TSC_hg19_v1_chr8_-_12990637	90548	-	AK289734 TSC_hg19_v1_chr8_-_12990794 DQ092382 AF026219 BC095415 NM_006094	90755	-	AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK299049|DLC1|10395|deleted in liver cancer 1##NM_001164271|DLC1|10395|deleted in liver cancer 1##DQ092384|DLC1|10395|deleted in liver cancer 1##DQ092383|DLC1|10395|deleted in liver cancer 1##AK289734|DLC1|10395|deleted in liver cancer 1##DQ092382|DLC1|10395|deleted in liver cancer 1##AF026219|DLC1|10395|deleted in liver cancer 1##BC095415|DLC1|10395|deleted in liver cancer 1##NM_006094|DLC1|10395|deleted in liver cancer 1	0.999752	CTCF.p2:-13:1.000
chr9	100161544	100161660	reg1002101.p1	15.017	+	NM_020893 CR749320	-91664	+	AK312806 NM_001201575	-359678	-	AF070448 BC023504 Y14734 AB001928 AK310645 AK310740 BC110512 AY358641 NM_001333	-360124	-	TSC_hg19_v1_chr9_+_100174364 NM_014290 BC028694	12671	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	12777	+	NM_001166116 AK314533	101860	+	NM_020893|C9orf174|100499483|chromosome 9 open reading frame 174##CR749320|C9orf174|100499483|chromosome 9 open reading frame 174##AK312806|CTSL2|1515|cathepsin L2##NM_001201575|CTSL2|1515|cathepsin L2##AF070448|CTSL2|1515|cathepsin L2##BC023504|CTSL2|1515|cathepsin L2##Y14734|CTSL2|1515|cathepsin L2##AB001928|CTSL2|1515|cathepsin L2##AK310645|CTSL2|1515|cathepsin L2##AK310740|CTSL2|1515|cathepsin L2##BC110512|CTSL2|1515|cathepsin L2##AY358641|CTSL2|1515|cathepsin L2##NM_001333|CTSL2|1515|cathepsin L2##NM_014290|TDRD7|23424|tudor domain containing 7##BC028694|TDRD7|23424|tudor domain containing 7##AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7##NM_001166116|TMOD1|7111|tropomodulin 1##AK314533|TMOD1|7111|tropomodulin 1	1.341233	CTCF.p2:4:0.991	CTCF.p2:107:0.350
chr12	53273816	53273956	reg1002001.p2	15.016	+	AB463817 AX721217 AK298636 AK096419 AK290901 NM_173352	-31140	-	AJ564105 BC063648 NM_175834 BC039148	-45817	-	CU692074 EU832356 EU832441 BC042174 X67683 BC012867 AK098110 AK296582 AK299394 AK299400 AK299451 AK307941 NM_002272	-66015	-	CU687300 AB528612 AM392826 AM392892 DQ892637 DQ895875 U76549 M34225 M26512 BC075839 BC073760 X74929 BC000654 Z36777 BC063513 TSC_hg19_v1_chr12_-_53298839 AK222941 D28446 NM_002273	24930	-	NM_199187 AK308506	68775	+	NM_000224 TSC_hg19_v1_chr12_+_53342874	68975	+	AK298636|KRT78|196374|keratin 78##AK096419|KRT78|196374|keratin 78##AK290901|KRT78|196374|keratin 78##NM_173352|KRT78|196374|keratin 78##AJ564105|KRT79|338785|keratin 79##BC063648|KRT79|338785|keratin 79##NM_175834|KRT79|338785|keratin 79##BC039148|KRT79|338785|keratin 79##EU832356|KRT4|3851|keratin 4##EU832441|KRT4|3851|keratin 4##BC042174|KRT4|3851|keratin 4##X67683|KRT4|3851|keratin 4##BC012867|KRT4|3851|keratin 4##AK098110|KRT4|3851|keratin 4##AK296582|KRT4|3851|keratin 4##AK299394|KRT4|3851|keratin 4##AK299400|KRT4|3851|keratin 4##AK299451|KRT4|3851|keratin 4##AK307941|KRT4|3851|keratin 4##NM_002272|KRT4|3851|keratin 4##AM392826|KRT8|3856|keratin 8##AM392892|KRT8|3856|keratin 8##DQ892637|KRT8|3856|keratin 8##DQ895875|KRT8|3856|keratin 8##U76549|KRT8|3856|keratin 8##M34225|KRT8|3856|keratin 8##M26512|KRT8|3856|keratin 8##BC075839|KRT8|3856|keratin 8##BC073760|KRT8|3856|keratin 8##X74929|KRT8|3856|keratin 8##BC000654|KRT8|3856|keratin 8##Z36777|KRT8|3856|keratin 8##BC063513|KRT8|3856|keratin 8##AK222941|KRT8|3856|keratin 8##NM_002273|KRT8|3856|keratin 8##NM_199187|KRT18|3875|keratin 18##AK308506|KRT18|3875|keratin 18##NM_000224|KRT18|3875|keratin 18	0.926513	CTCF.p2:9:0.927
chr17	18979849	18979938	reg1001211.p1	15.012	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-29607	-	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-71814	-	AK057946 NM_001042450 NM_152351 AK298345 BC062617 BC034380	-124389	+	BC157869 NM_001129778	50888	+	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	160815	+	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	286076	-	BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##AK057946|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001042450|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_152351|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##AK298345|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC062617|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC034380|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1	1.011271	CTCF.p2:1:1.000
chr3	152192529	152192652	reg1001162.p1	15.012	+	AY358260 NM_001123228	-133812	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-175397	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	-205245	-	NM_002563 Z49205	360145	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	687436	+	TSC_hg19_v1_chr3_+_152880058 BC012362	687458	+	AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family	0.968611	CTCF.p2:-28:0.969
chr9	133739099	133739221	reg1002974.p1	15.012	+	TSC_hg19_v1_chr9_+_133710748 M14754 NM_005157	-28372	+	TSC_hg19_v1_chr9_+_133710665 M30833 X16416	-28493	+	NM_007313 AB209642 M14753	-149841	+	AB109625 BC101127 BC101128 EU832764 GQ129307 NM_198180	30064	-	BC112892 AY358311 AK292489 TSC_hg19_v1_chr9_-_133814106	74891	-	BC032953 NM_032843 TSC_hg19_v1_chr9_-_133814253	75084	-	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##NM_007313|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AB209642|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M14753|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AB109625|QRFP|347148|pyroglutamylated RFamide peptide##BC101127|QRFP|347148|pyroglutamylated RFamide peptide##BC101128|QRFP|347148|pyroglutamylated RFamide peptide##EU832764|QRFP|347148|pyroglutamylated RFamide peptide##GQ129307|QRFP|347148|pyroglutamylated RFamide peptide##NM_198180|QRFP|347148|pyroglutamylated RFamide peptide##BC112892|FIBCD1|84929|fibrinogen C domain containing 1##AY358311|FIBCD1|84929|fibrinogen C domain containing 1##AK292489|FIBCD1|84929|fibrinogen C domain containing 1##BC032953|FIBCD1|84929|fibrinogen C domain containing 1##NM_032843|FIBCD1|84929|fibrinogen C domain containing 1	0.162021	
chrX	64815398	64815546	reg1001897.p1	15.012	+	TSC_hg19_v1_chrX_-_64754668 AK074087 BC014545 NM_001170649 NM_001170650 NM_031206	-60808	-	CU677041 TSC_hg19_v1_chrX_-_64754635 AK225059 AF116730 BC019302 BC018610 AK022587 AK097383 AK295591	-60857	-	BC140767 BC171781 NM_001010888 BX647241	-106813	+	NM_002444 TSC_hg19_v1_chrX_+_64887520	72045	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	72075	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	72176	+	AK074087|LAS1L|81887|LAS1-like (S. cerevisiae)##BC014545|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_001170649|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_001170650|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_031206|LAS1L|81887|LAS1-like (S. cerevisiae)##AK225059|LAS1L|81887|LAS1-like (S. cerevisiae)##AF116730|LAS1L|81887|LAS1-like (S. cerevisiae)##BC019302|LAS1L|81887|LAS1-like (S. cerevisiae)##BC018610|LAS1L|81887|LAS1-like (S. cerevisiae)##AK022587|LAS1L|81887|LAS1-like (S. cerevisiae)##AK097383|LAS1L|81887|LAS1-like (S. cerevisiae)##AK295591|LAS1L|81887|LAS1-like (S. cerevisiae)##BC140767|ZC3H12B|340554|zinc finger CCCH-type containing 12B##BC171781|ZC3H12B|340554|zinc finger CCCH-type containing 12B##NM_001010888|ZC3H12B|340554|zinc finger CCCH-type containing 12B##BX647241|ZC3H12B|340554|zinc finger CCCH-type containing 12B##NM_002444|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin	0.776216	CTCF.p2:-41:0.776
chr1	117280030	117280177	reg1002914.p1	15.011	+	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	-69720	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	-166426	-	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	-166488	-	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	17004	+	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	172539	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	264302	+	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule	0.950923	CTCF.p2:-15:0.951
chr12	48343369	48343484	reg1001858.p1	15.011	+	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	-44625	-	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	-129762	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-176392	+	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	13912	+	TSC_hg19_v1_chr12_+_48357387 AK310035 AK313698 AK299154 BC107792	13994	+	NM_001844 NM_033150 TSC_hg19_v1_chr12_-_48398292	54862	-	J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C##AK310035|TMEM106C|79022|transmembrane protein 106C##AK313698|TMEM106C|79022|transmembrane protein 106C##AK299154|TMEM106C|79022|transmembrane protein 106C##BC107792|TMEM106C|79022|transmembrane protein 106C##NM_001844|COL2A1|1280|collagen, type II, alpha 1##NM_033150|COL2A1|1280|collagen, type II, alpha 1	0.420946	CTCF.p2:-1:0.421
chr3	149435341	149435458	reg1001954.p1	15.009	+	AK022036 NM_001168278	-14340	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	-59664	-	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-242910	+	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	34840	-	TSC_hg19_v1_chr3_-_149470277 AF059618 BC001228 BC022206 AF125096 BC093077 NM_016094	34871	-	BC171805 NM_001144960	75210	-	AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2##AF059618|COMMD2|51122|COMM domain containing 2##BC001228|COMMD2|51122|COMM domain containing 2##BC022206|COMMD2|51122|COMM domain containing 2##AF125096|COMMD2|51122|COMM domain containing 2##BC093077|COMMD2|51122|COMM domain containing 2##NM_016094|COMMD2|51122|COMM domain containing 2##BC171805|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1##NM_001144960|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1	0.466554	CTCF.p2:16:0.467
chr19	40283738	40283872	reg1001879.p1	15.008	+	NM_001143832	-16572	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	-55166	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	-88762	+	TSC_hg19_v1_chr19_-_40324779 AF205861 BC025291 AK074971 BC009688 AK302127 BC018751 NM_004714 NM_006483 NM_006484 Y17999	40993	-	BC019609 BC015218 TSC_hg19_v1_chr19_-_40331308 AB451384 BT006830 BT020144 CR457069	47486	-	AB463635 M59849 TSC_hg19_v1_chr19_-_40336992	53163	-	NM_001143832|LEUTX|342900|leucine twenty homeobox##FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC019609|FBL|2091|fibrillarin##BC015218|FBL|2091|fibrillarin##AB451384|FBL|2091|fibrillarin##BT006830|FBL|2091|fibrillarin##BT020144|FBL|2091|fibrillarin##CR457069|FBL|2091|fibrillarin##M59849|FBL|2091|fibrillarin	0.823644	CTCF.p2:-7:0.750
chr2	134965295	134965410	reg1002671.p1	15.008	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-639314	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-785998	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-1425658	-	NM_002410 D17716 AF113921	46533	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	511204	-	AK125008 NM_138326 BC016018 BC107420 AB071418	630866	+	AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	0.740388	CTCF.p2:4:0.580
chr11	35413864	35414002	reg1002435.p1	15.005	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	-135108	-	TSC_hg19_v1_chr11_+_35198199 AK129808	-215721	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-253073	+	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	26778	-	TSC_hg19_v1_chr11_-_35441106 NM_004171	27170	-	S83375 U01824 TSC_hg19_v1_chr11_-_35441572 AK122843 NM_001195728 NM_001252652	27622	-	CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK129808|CD44|960|CD44 molecule (Indian blood group)##AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.705457	CTCF.p2:24:0.705
chr1	17828940	17829052	reg1002060.p1	15.005	+	TSC_hg19_v1_chr1_-_17766260 NM_018715	-62725	-	TSC_hg19_v1_chr1_-_17766174 AB040903	-62821	-	TSC_hg19_v1_chr1_-_17765069 BC053908 NM_001136204	-63935	-	TSC_hg19_v1_chr1_+_17846826 AK129959	17827	+	TSC_hg19_v1_chr1_+_17866365 AB046846 NM_018125 AK311076	37364	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	78019	+	NM_018715|RCC2|55920|regulator of chromosome condensation 2##AB040903|RCC2|55920|regulator of chromosome condensation 2##BC053908|RCC2|55920|regulator of chromosome condensation 2##NM_001136204|RCC2|55920|regulator of chromosome condensation 2##AK129959|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AB046846|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_018125|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK311076|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like	0.850706	CTCF.p2:-4:0.851
chr17	41751283	41751397	reg1002663.p1	15.004	+	NM_001040002 AK291139	-12065	-	AB527749 CU686836 EU446636 BC069474 BC069506 NM_004527 NM_013999 U10492 U10493	-12425	-	TSC_hg19_v1_chr17_-_41623674 AK315961 U18018 NM_001079675	-127614	-	BC101086 BC101087 BC101088 BC101089 AF331844 AF326739 NM_025237	84803	-	AK226170 TSC_hg19_v1_chr17_-_41856314 AB451424 BT019522 CU678116 DQ893122 DQ896399 BC035701 AK129822 L05147 BC002682 NM_004090	104944	-	BC054872 BC070324 NM_001136483 BC146971 AK125817	106474	+	NM_001040002|MEOX1|4222|mesenchyme homeobox 1##AK291139|MEOX1|4222|mesenchyme homeobox 1##EU446636|MEOX1|4222|mesenchyme homeobox 1##BC069474|MEOX1|4222|mesenchyme homeobox 1##BC069506|MEOX1|4222|mesenchyme homeobox 1##NM_004527|MEOX1|4222|mesenchyme homeobox 1##NM_013999|MEOX1|4222|mesenchyme homeobox 1##U10492|MEOX1|4222|mesenchyme homeobox 1##U10493|MEOX1|4222|mesenchyme homeobox 1##AK315961|ETV4|2118|ets variant 4##U18018|ETV4|2118|ets variant 4##NM_001079675|ETV4|2118|ets variant 4##BC101086|SOST|50964|sclerostin##BC101087|SOST|50964|sclerostin##BC101088|SOST|50964|sclerostin##BC101089|SOST|50964|sclerostin##AF331844|SOST|50964|sclerostin##AF326739|SOST|50964|sclerostin##NM_025237|SOST|50964|sclerostin##AK226170|DUSP3|1845|dual specificity phosphatase 3##AB451424|DUSP3|1845|dual specificity phosphatase 3##BT019522|DUSP3|1845|dual specificity phosphatase 3##DQ893122|DUSP3|1845|dual specificity phosphatase 3##DQ896399|DUSP3|1845|dual specificity phosphatase 3##BC035701|DUSP3|1845|dual specificity phosphatase 3##AK129822|DUSP3|1845|dual specificity phosphatase 3##L05147|DUSP3|1845|dual specificity phosphatase 3##BC002682|DUSP3|1845|dual specificity phosphatase 3##NM_004090|DUSP3|1845|dual specificity phosphatase 3##BC054872|C17orf105|284067|chromosome 17 open reading frame 105##BC070324|C17orf105|284067|chromosome 17 open reading frame 105##NM_001136483|C17orf105|284067|chromosome 17 open reading frame 105##BC146971|C17orf105|284067|chromosome 17 open reading frame 105##AK125817|C17orf105|284067|chromosome 17 open reading frame 105	0.961124	CTCF.p2:13:0.961
chr10	25369995	25370151	reg1002260.p1	15.003	+	NM_024838 TSC_hg19_v1_chr10_+_25305540 AK125249 BC035132 BX647989	-64523	+	CU693144 DQ892076 DQ895269 BC064597 AK095021 NM_145010 AY454125 AK292495 BC026165	-65099	-	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	-128541	-	AY528411 NM_020752	94216	+	NM_017433	852928	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	853107	+	NM_024838|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AK125249|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BC035132|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BX647989|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##DQ892076|ENKUR|219670|enkurin, TRPC channel interacting protein##DQ895269|ENKUR|219670|enkurin, TRPC channel interacting protein##AK095021|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_145010|ENKUR|219670|enkurin, TRPC channel interacting protein##AY454125|ENKUR|219670|enkurin, TRPC channel interacting protein##AK292495|ENKUR|219670|enkurin, TRPC channel interacting protein##BC026165|ENKUR|219670|enkurin, TRPC channel interacting protein##AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AY528411|GPR158|57512|G protein-coupled receptor 158##NM_020752|GPR158|57512|G protein-coupled receptor 158##NM_017433|MYO3A|53904|myosin IIIA##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA	0.897873	CTCF.p2:16:0.898
chr17	36740719	36740837	reg1002148.p1	15.003	+	TSC_hg19_v1_chr17_-_36729122 AK295027	-11656	-	TSC_hg19_v1_chr17_+_36584709 NM_001199417	-156073	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	-232915	+	BC029278 TSC_hg19_v1_chr17_-_36760969	20160	-	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	21418	-	TSC_hg19_v1_chr17_-_36831211 NM_001130677	90407	-	AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96	0.980965	CTCF.p2:10:0.981
chr19	10380246	10380375	reg1002121.p1	15.002	+	TSC_hg19_v1_chr19_+_10362916 AB049635 AY007152	-17318	+	TSC_hg19_v1_chr19_+_10362889 BC009858	-17412	+	TSC_hg19_v1_chr19_+_10362680 NM_015956 NM_146387 NM_146388 AF132962 BC000756	-17663	+	NM_000201	1206	+	M24283 BC015969 AK301412 J03132 TSC_hg19_v1_chr19_+_10381795 AK130659 AK312636 AK298054 AK298983 X06990 AB590404 AF340038 BT006854 AF340039	1495	+	BC029364 NM_001039132 NM_001544 NM_022377 BC000046 L27670 L27671 S78852 DQ892650 DQ895889 BT009816	17355	+	AB049635|MRPL4|51073|mitochondrial ribosomal protein L4##AY007152|MRPL4|51073|mitochondrial ribosomal protein L4##BC009858|MRPL4|51073|mitochondrial ribosomal protein L4##NM_015956|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146387|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146388|MRPL4|51073|mitochondrial ribosomal protein L4##AF132962|MRPL4|51073|mitochondrial ribosomal protein L4##BC000756|MRPL4|51073|mitochondrial ribosomal protein L4##NM_000201|ICAM1|3383|intercellular adhesion molecule 1##M24283|ICAM1|3383|intercellular adhesion molecule 1##BC015969|ICAM1|3383|intercellular adhesion molecule 1##AK301412|ICAM1|3383|intercellular adhesion molecule 1##J03132|ICAM1|3383|intercellular adhesion molecule 1##AK130659|ICAM1|3383|intercellular adhesion molecule 1##AK312636|ICAM1|3383|intercellular adhesion molecule 1##AK298054|ICAM1|3383|intercellular adhesion molecule 1##AK298983|ICAM1|3383|intercellular adhesion molecule 1##X06990|ICAM1|3383|intercellular adhesion molecule 1##AF340038|ICAM1|3383|intercellular adhesion molecule 1##BT006854|ICAM1|3383|intercellular adhesion molecule 1##AF340039|ICAM1|3383|intercellular adhesion molecule 1##BC029364|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##NM_001039132|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##NM_001544|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##NM_022377|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##BC000046|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##L27670|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##L27671|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##S78852|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##DQ892650|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##DQ895889|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##BT009816|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)	0.0	
chr9	38371617	38371738	reg1001976.p1	15.002	+	X75342 NM_003028 TSC_hg19_v1_chr9_-_38069225 BC094765	-302436	-	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	-302536	-	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	-467311	-	TSC_hg19_v1_chr9_+_38392669 NM_000692	20996	+	TSC_hg19_v1_chr9_+_38392698 AK313344	21020	+	TSC_hg19_v1_chr9_+_38392760 AK297020 BC001619 AK225950	21065	+	X75342|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_003028|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B##AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK313344|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK297020|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##BC001619|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK225950|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1	0.953097	CTCF.p2:-16:0.953
chr3	108125556	108125686	reg1002967.p1	15.001	+	BC035971 NM_007072	-104290	+	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	-110220	+	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	-184329	-	AB023217 NM_014981	122547	-	AB463087 AM393250 HQ258525 BC082961 TSC_hg19_v1_chr3_-_108308269 BC130564 BC136371 BC063433 AL713689 AF334474 AK056933 AK308315	182639	-	NM_014648 TSC_hg19_v1_chr3_+_108308395	182744	+	BC035971|HHLA2|11148|HERV-H LTR-associating 2##NM_007072|HHLA2|11148|HERV-H LTR-associating 2##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AB023217|MYH15|22989|myosin, heavy chain 15##NM_014981|MYH15|22989|myosin, heavy chain 15##AM393250|KIAA1524|57650|KIAA1524##BC082961|KIAA1524|57650|KIAA1524##BC130564|KIAA1524|57650|KIAA1524##BC136371|KIAA1524|57650|KIAA1524##BC063433|KIAA1524|57650|KIAA1524##AL713689|KIAA1524|57650|KIAA1524##AF334474|KIAA1524|57650|KIAA1524##AK056933|KIAA1524|57650|KIAA1524##AK308315|KIAA1524|57650|KIAA1524##NM_014648|DZIP3|9666|DAZ interacting protein 3, zinc finger	0.991438	CTCF.p2:-3:0.991
chr12	8834774	8834911	reg1001937.p2	15.000	+	AK124368 TSC_hg19_v1_chr12_-_8815486	-19360	-	TSC_hg19_v1_chr12_-_8815423 U37283 NM_003480	-19441	-	TSC_hg19_v1_chr12_-_8815272 AK315807 BC005901 AK290585 AK299475	-19546	-	TSC_hg19_v1_chr12_+_8850570 AK302847 NM_020734 BC006368	15762	+	NM_144670 AK122624 AK290355 AL832139 BX648231	140340	+	TSC_hg19_v1_chr12_+_9067153 AB209063 AK293893 NM_004426 BC073964 U89277 BC157850	232427	+	AK124368|MFAP5|8076|microfibrillar associated protein 5##U37283|MFAP5|8076|microfibrillar associated protein 5##NM_003480|MFAP5|8076|microfibrillar associated protein 5##AK315807|MFAP5|8076|microfibrillar associated protein 5##BC005901|MFAP5|8076|microfibrillar associated protein 5##AK290585|MFAP5|8076|microfibrillar associated protein 5##AK299475|MFAP5|8076|microfibrillar associated protein 5##AK302847|RIMKLB|57494|ribosomal modification protein rimK-like family member B##NM_020734|RIMKLB|57494|ribosomal modification protein rimK-like family member B##BC006368|RIMKLB|57494|ribosomal modification protein rimK-like family member B##NM_144670|A2ML1|144568|alpha-2-macroglobulin-like 1##AK122624|A2ML1|144568|alpha-2-macroglobulin-like 1##AK290355|A2ML1|144568|alpha-2-macroglobulin-like 1##AL832139|A2ML1|144568|alpha-2-macroglobulin-like 1##BX648231|A2ML1|144568|alpha-2-macroglobulin-like 1##AB209063|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##AK293893|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##NM_004426|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC073964|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##U89277|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC157850|PHC1|1911|polyhomeotic homolog 1 (Drosophila)	0.607467	CTCF.p2:-9:0.607
chr15	86383905	86384017	reg1001790.p1	15.000	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-45766	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-45864	-	AF127481 NM_144767	-163694	+	NM_152336	301280	+	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	2416005	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	2626667	-	NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46	0.983925	CTCF.p2:9:0.984
chr11	102366239	102366394	reg1001455.p2	14.999	+	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-42703	-	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-148288	+	TSC_hg19_v1_chr11_+_102217944 AK303197	-148387	+	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	35143	-	AB527354 NM_004771 Y12779	129739	-	AB527320 AF195192 AY358752 NM_022122	210139	-	DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##AK303197|BIRC2|329|baculoviral IAP repeat containing 2##DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27	0.958237	CTCF.p2:11:0.958
chr3	111686644	111686770	reg1003205.p1	14.999	+	AL832476 AK092996 AX747845 TSC_hg19_v1_chr3_+_111578690 AB209903	-108033	+	AL832205 TSC_hg19_v1_chr3_+_111578609	-108098	+	TSC_hg19_v1_chr3_+_111578598 NM_001134439 BC038806	-108142	+	NM_018394 TSC_hg19_v1_chr3_+_111697885 AK300018 BC014516 AK093591 AK002204 AB528058 AM392560	11160	+	NM_001008272 NM_013259 AF303058 AF087855 AK315289 TSC_hg19_v1_chr3_+_111717781 BC015329	31000	+	NM_001008273 BC004477 TSC_hg19_v1_chr3_+_111718179 AF112201 BT007408 CU677265	31430	+	AL832476|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK092996|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AB209903|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AL832205|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001134439|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##BC038806|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_018394|ABHD10|55347|abhydrolase domain containing 10##AK300018|ABHD10|55347|abhydrolase domain containing 10##BC014516|ABHD10|55347|abhydrolase domain containing 10##AK002204|ABHD10|55347|abhydrolase domain containing 10##AM392560|ABHD10|55347|abhydrolase domain containing 10##NM_001008272|TAGLN3|29114|transgelin 3##NM_013259|TAGLN3|29114|transgelin 3##AF303058|TAGLN3|29114|transgelin 3##AF087855|TAGLN3|29114|transgelin 3##AK315289|TAGLN3|29114|transgelin 3##BC015329|TAGLN3|29114|transgelin 3##NM_001008273|TAGLN3|29114|transgelin 3##AF112201|TAGLN3|29114|transgelin 3##BT007408|TAGLN3|29114|transgelin 3	0.998715	CTCF.p2:5:0.999
chr6	111531581	111531717	reg1003620.p1	14.997	+	AB057445 NM_018593 BC066985 TSC_hg19_v1_chr6_+_111408810	-122854	+	TSC_hg19_v1_chr6_+_111408673 AK126183 BC034031	-122973	+	AK292165 TSC_hg19_v1_chr6_+_111303240 AK024740 AK301662 AL833613 BC005347 BC035314 NM_032194 CU690066	-228375	+	NM_153369 TSC_hg19_v1_chr6_+_111580541 AK093136 AX747946 AK292735 AK315016	48874	+	TSC_hg19_v1_chr6_+_111580568 BC036115	48923	+	BC038986 AF303220 AF157476 AF179428 AF179429 TSC_hg19_v1_chr6_-_111804167	272499	-	AB057445|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##NM_018593|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC066985|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##AK126183|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC034031|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##AK292165|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK024740|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK301662|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AL833613|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC005347|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC035314|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##NM_032194|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##NM_153369|KIAA1919|91749|KIAA1919##AK093136|KIAA1919|91749|KIAA1919##AK292735|KIAA1919|91749|KIAA1919##AK315016|KIAA1919|91749|KIAA1919##BC036115|KIAA1919|91749|KIAA1919##AF303220|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF157476|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179428|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179429|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)	0.133883	
chr18	55113696	55113817	reg1002876.p1	14.996	+	TSC_hg19_v1_chr18_+_55102810 NM_004852 Y18198 BC108925 BC108926	-10891	+	AB208996 NM_015879	-94036	+	AK127964 TSC_hg19_v1_chr18_+_54814333 BC021740 BC035018 AK301799	-299417	+	TSC_hg19_v1_chr18_-_55253912 AK223190 BX571744 AB529061 BT019958 BT019959 AK292937 D00726 AK299643 AK092416 BC039841 NM_000140 NM_001012515	140163	-	TSC_hg19_v1_chr18_-_55287856 AB528053	174114	-	CU674834 TSC_hg19_v1_chr18_-_55288981 AK129897 D84273	175211	-	NM_004852|ONECUT2|9480|one cut homeobox 2##Y18198|ONECUT2|9480|one cut homeobox 2##BC108925|ONECUT2|9480|one cut homeobox 2##BC108926|ONECUT2|9480|one cut homeobox 2##AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##AK127964|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC021740|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC035018|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK301799|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK223190|FECH|2235|ferrochelatase##BX571744|FECH|2235|ferrochelatase##BT019958|FECH|2235|ferrochelatase##BT019959|FECH|2235|ferrochelatase##AK292937|FECH|2235|ferrochelatase##D00726|FECH|2235|ferrochelatase##AK299643|FECH|2235|ferrochelatase##AK092416|FECH|2235|ferrochelatase##BC039841|FECH|2235|ferrochelatase##NM_000140|FECH|2235|ferrochelatase##NM_001012515|FECH|2235|ferrochelatase##AK129897|NARS|4677|asparaginyl-tRNA synthetase##D84273|NARS|4677|asparaginyl-tRNA synthetase	0.969672	CTCF.p2:14:0.970
chr5	139012969	139013128	reg1002022.p1	14.996	+	TSC_hg19_v1_chr5_+_138941350 U39317 AB590980	-71700	+	TSC_hg19_v1_chr5_+_138940966 AK001428 BC019052 AK001311 AY651263	-72123	+	TSC_hg19_v1_chr5_+_138940760 BC033349 NM_003339 NM_181838 BC048426	-72275	+	TSC_hg19_v1_chr5_+_139027874 AK024338	14826	+	TSC_hg19_v1_chr5_+_139027942 BC006428	14882	+	BC024040 BC041013 TSC_hg19_v1_chr5_+_139027968 BC050046 BC017439	14936	+	U39317|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001428|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC019052|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001311|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AY651263|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC033349|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_003339|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_181838|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC048426|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK024338|CXXC5|51523|CXXC finger protein 5##BC006428|CXXC5|51523|CXXC finger protein 5##BC024040|CXXC5|51523|CXXC finger protein 5##BC041013|CXXC5|51523|CXXC finger protein 5##BC050046|CXXC5|51523|CXXC finger protein 5##BC017439|CXXC5|51523|CXXC finger protein 5	0.999914	CTCF.p2:5:1.000
chrX	31057137	31057258	reg1001861.p1	14.995	+	TSC_hg19_v1_chrX_-_30907408 AK297274 NM_152787	-149738	-	TSC_hg19_v1_chrX_+_30671612 L13943 AK294938 AK294304 BX647604 AK308238 BC037549 CU688226 DQ891580 DQ894773	-385569	+	TSC_hg19_v1_chrX_+_30671539 AK313215	-385655	+	BC069538 BC100768 BC100769 BC100770 BC069069 AF285592 NM_031894	32966	-	CU688550 M92650 TSC_hg19_v1_chrX_-_31285072 BC070078 NM_004015 NM_004016 NM_004017 NM_004018 NM_004019 S42206 BC094758 AK299936 BC028720 S38776	227837	-	NM_004014 S62617	469217	-	AK297274|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##NM_152787|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##L13943|GK|2710|glycerol kinase##AK294938|GK|2710|glycerol kinase##AK294304|GK|2710|glycerol kinase##BX647604|GK|2710|glycerol kinase##AK308238|GK|2710|glycerol kinase##BC037549|GK|2710|glycerol kinase##DQ891580|GK|2710|glycerol kinase##DQ894773|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase##BC069538|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100768|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100769|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100770|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC069069|FTHL17|53940|ferritin, heavy polypeptide-like 17##AF285592|FTHL17|53940|ferritin, heavy polypeptide-like 17##NM_031894|FTHL17|53940|ferritin, heavy polypeptide-like 17##M92650|DMD|1756|dystrophin##BC070078|DMD|1756|dystrophin##NM_004015|DMD|1756|dystrophin##NM_004016|DMD|1756|dystrophin##NM_004017|DMD|1756|dystrophin##NM_004018|DMD|1756|dystrophin##NM_004019|DMD|1756|dystrophin##S42206|DMD|1756|dystrophin##BC094758|DMD|1756|dystrophin##AK299936|DMD|1756|dystrophin##BC028720|DMD|1756|dystrophin##S38776|DMD|1756|dystrophin##NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin	0.945939	CTCF.p2:-32:0.946
chr16	66901848	66901964	reg1002732.p1	14.991	+	AY075020 NM_001014435	-23066	+	AY075019 NM_005182 BC033865 DQ895264 EU176243	-23571	+	TSC_hg19_v1_chr16_-_66864880 U50939 AK307677 AK097680 AK312784 NM_001018159 NM_001018160 NM_003905	-37020	-	TSC_hg19_v1_chr16_+_66914417 AK292539 NM_020786 AB037769 BC028030	12538	+	AF016272 AK225544 AK298255 AK225552 AK298334 AK313101 AK075243 AY358911 NM_001204744 NM_001204745 NM_001204746 NM_004062	50901	-	L24564 BC011645 AK290613 BC057815 NM_001128850 NM_004165	57522	-	AY075020|CA7|766|carbonic anhydrase VII##NM_001014435|CA7|766|carbonic anhydrase VII##AY075019|CA7|766|carbonic anhydrase VII##NM_005182|CA7|766|carbonic anhydrase VII##BC033865|CA7|766|carbonic anhydrase VII##DQ895264|CA7|766|carbonic anhydrase VII##EU176243|CA7|766|carbonic anhydrase VII##U50939|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK307677|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK097680|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK312784|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##NM_001018159|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##NM_001018160|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##NM_003905|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK292539|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##NM_020786|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##AB037769|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##BC028030|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##AF016272|CDH16|1014|cadherin 16, KSP-cadherin##AK225544|CDH16|1014|cadherin 16, KSP-cadherin##AK298255|CDH16|1014|cadherin 16, KSP-cadherin##AK225552|CDH16|1014|cadherin 16, KSP-cadherin##AK298334|CDH16|1014|cadherin 16, KSP-cadherin##AK313101|CDH16|1014|cadherin 16, KSP-cadherin##AK075243|CDH16|1014|cadherin 16, KSP-cadherin##AY358911|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204744|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204745|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204746|CDH16|1014|cadherin 16, KSP-cadherin##NM_004062|CDH16|1014|cadherin 16, KSP-cadherin##L24564|RRAD|6236|Ras-related associated with diabetes##BC011645|RRAD|6236|Ras-related associated with diabetes##AK290613|RRAD|6236|Ras-related associated with diabetes##BC057815|RRAD|6236|Ras-related associated with diabetes##NM_001128850|RRAD|6236|Ras-related associated with diabetes##NM_004165|RRAD|6236|Ras-related associated with diabetes	0.998539	CTCF.p2:-4:0.999
chr16	81657114	81657246	reg1002934.p1	14.991	+	AY172689 NM_030629	-128227	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-178347	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-308530	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	155717	+	TSC_hg19_v1_chr16_+_81812901 AB208914	155722	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	155750	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.999814	CTCF.p2:-5:0.970
chr1	200772128	200772269	reg1003153.p1	14.990	+	TSC_hg19_v1_chr1_+_200708732 AK095640 NM_203459	-63527	+	TSC_hg19_v1_chr1_-_200639091 BC041801 NM_001031725	-133090	-	AK299219 BC020201 TSC_hg19_v1_chr1_-_200639024 AL136611 BC014183 AK307569	-133169	-	BC126386 BC126388 AK315339 NM_005298	69925	+	TSC_hg19_v1_chr1_+_200860668 NM_018265 AK001583 AK001763 BC106877	88448	+	AK316510 NM_001142569 TSC_hg19_v1_chr1_+_200864027 AK303885	91799	+	AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##BC041801|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_001031725|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK299219|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC020201|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AL136611|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC014183|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK307569|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC126386|GPR25|2848|G protein-coupled receptor 25##BC126388|GPR25|2848|G protein-coupled receptor 25##AK315339|GPR25|2848|G protein-coupled receptor 25##NM_005298|GPR25|2848|G protein-coupled receptor 25##NM_018265|C1orf106|55765|chromosome 1 open reading frame 106##AK001583|C1orf106|55765|chromosome 1 open reading frame 106##AK001763|C1orf106|55765|chromosome 1 open reading frame 106##BC106877|C1orf106|55765|chromosome 1 open reading frame 106##AK316510|C1orf106|55765|chromosome 1 open reading frame 106##NM_001142569|C1orf106|55765|chromosome 1 open reading frame 106##AK303885|C1orf106|55765|chromosome 1 open reading frame 106	0.997265	CTCF.p2:8:0.997
chr10	70997456	70997585	reg1002705.p1	14.989	+	AK095086 NM_025130 BC110505 BC110504 TSC_hg19_v1_chr10_+_70980087 AK291024 BC069201	-17439	+	TSC_hg19_v1_chr10_+_70940005 BC036112 NM_003171 AK290416 AK299670 AF042169 CU690300 DQ891004 DQ894183	-57505	+	BX647725 TSC_hg19_v1_chr10_+_70883987 AK290536	-113520	+	NM_033497 NM_033498 NM_033500 U38226 U38227 U38228 AK128226	32237	+	NM_033496	78089	+	TSC_hg19_v1_chr10_+_71078602 AK292012 NM_000188 AK294428 AB209526 M75126	81079	+	AK095086|HKDC1|80201|hexokinase domain containing 1##NM_025130|HKDC1|80201|hexokinase domain containing 1##BC110505|HKDC1|80201|hexokinase domain containing 1##BC110504|HKDC1|80201|hexokinase domain containing 1##AK291024|HKDC1|80201|hexokinase domain containing 1##BC069201|HKDC1|80201|hexokinase domain containing 1##BC036112|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##NM_003171|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##AK290416|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##AK299670|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##AF042169|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##DQ891004|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##DQ894183|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##BX647725|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK290536|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_033497|HK1|3098|hexokinase 1##NM_033498|HK1|3098|hexokinase 1##NM_033500|HK1|3098|hexokinase 1##U38226|HK1|3098|hexokinase 1##U38227|HK1|3098|hexokinase 1##U38228|HK1|3098|hexokinase 1##AK128226|HK1|3098|hexokinase 1##NM_033496|HK1|3098|hexokinase 1##AK292012|HK1|3098|hexokinase 1##NM_000188|HK1|3098|hexokinase 1##AK294428|HK1|3098|hexokinase 1##AB209526|HK1|3098|hexokinase 1##M75126|HK1|3098|hexokinase 1	0.0	
chr13	29210958	29211101	reg1002996.p1	14.988	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	-141785	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	-498363	+	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	-536342	-	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	22179	+	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	22265	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	82026	-	BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3	0.015498	
chr14	69255768	69255875	reg1001932.p2	14.988	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-969301	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-972522	-	AK315462 NM_152443	-1087219	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	3899	-	NM_001244698 NM_004926	4809	-	NM_001244701 AB528867	7163	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.685402	CTCF.p2:8:0.510
chr1	161456923	161457073	reg1003378.p1	14.985	+	NM_001013625	-119335	-	NM_001035511 NM_001035512 NM_001035513 NM_003001 TSC_hg19_v1_chr1_+_161284170 AK131051 AK293687 AK294305 BC020808 BC066329 U57877 AB211234 AB211235 AB201252 AB212048 BC012735 BC033626 D49737	-172819	+	BT006765 DQ895885 EU176378 S66705 D10537 BC006491 AK313555 TSC_hg19_v1_chr1_-_161279760 NM_000530	-177256	-	TSC_hg19_v1_chr1_+_161475246 NM_001136219 NM_021642 BC019931 AK226059 AK225438 AK298657 AK315225 Y00644 AK225601 M31932 CU676732 AK298734 BC020823 AB529040 DQ892037 DQ895228 J03619 M28697 X62572	18237	+	NM_002155	37037	+	CU676090 CU689692 AK223268 TSC_hg19_v1_chr1_-_161519555 BC033678 AK223295 X52645 AB528616 CU691394	62581	-	NM_001013625|C1orf192|257177|chromosome 1 open reading frame 192##NM_001035511|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001035512|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001035513|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_003001|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK131051|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK293687|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK294305|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC020808|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC066329|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##U57877|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB211234|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB211235|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB201252|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB212048|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC012735|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC033626|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##D49737|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BT006765|MPZ|4359|myelin protein zero##DQ895885|MPZ|4359|myelin protein zero##EU176378|MPZ|4359|myelin protein zero##S66705|MPZ|4359|myelin protein zero##D10537|MPZ|4359|myelin protein zero##BC006491|MPZ|4359|myelin protein zero##AK313555|MPZ|4359|myelin protein zero##NM_000530|MPZ|4359|myelin protein zero##NM_001136219|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##NM_021642|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##BC019931|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK226059|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK225438|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK298657|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK315225|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##Y00644|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK225601|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##M31932|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK298734|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##BC020823|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##DQ892037|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##DQ895228|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##J03619|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##M28697|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##X62572|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##NM_002155|HSPA6|3310|heat shock 70kDa protein 6 (HSP70B')##AK223268|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##BC033678|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK223295|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##X52645|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)	0.995135	CTCF.p2:-15:0.995
chr15	76431953	76432059	reg1002044.p2	14.985	+	TSC_hg19_v1_chr15_+_76352323 AK056777 AK308676	-79677	+	TSC_hg19_v1_chr15_+_76352281 AK095509 NM_152335	-79717	+	AK311204 TSC_hg19_v1_chr15_-_76352131	-79904	-	BT009796 J04058 TSC_hg19_v1_chr15_-_76603737 AB529049 BC095457	171726	-	TSC_hg19_v1_chr15_-_76603771 AK300044 BC015526 D28380	171759	-	TSC_hg19_v1_chr15_-_76603791 BC029995	171791	-	AK308676|C15orf27|123591|chromosome 15 open reading frame 27##AK095509|C15orf27|123591|chromosome 15 open reading frame 27##NM_152335|C15orf27|123591|chromosome 15 open reading frame 27##AK311204|NRG4|145957|neuregulin 4##BT009796|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##J04058|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC095457|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##AK300044|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC015526|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC029995|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide	0.941046	CTCF.p2:4:0.941
chr8	80997392	80997518	reg1002147.p1	14.985	+	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-4426	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	-54953	-	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	-317458	-	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	86315	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	401029	+	AK131274 NM_001033723	789560	-	AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704	0.979632	CTCF.p2:-10:0.980
chr9	33225708	33225846	reg1002523.p1	14.985	+	NM_001497 TSC_hg19_v1_chr9_-_33167361	-58416	-	TSC_hg19_v1_chr9_-_33167335 BC045773	-58451	-	D29805 X13223 X14085 M22921 U10474 TSC_hg19_v1_chr9_-_33167262	-58530	-	TSC_hg19_v1_chr9_+_33240166 AF048700 BC110068 NM_014471	14403	+	AM392568 BC014774 TSC_hg19_v1_chr9_-_33264707 AK096038 AK316577 AF116273 BC002407 AK222749 AF022224 U46917 BC001936 Z35491 NM_001172415 NM_004323	38831	-	NM_001195536 NM_016410 TSC_hg19_v1_chr9_+_33265035 BC016698 BC007457 AK315455 AK024753 BC018603 BC021168 AK295744	39179	+	NM_001497|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##BC045773|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##D29805|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X13223|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X14085|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##M22921|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##U10474|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AF048700|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##BC110068|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##NM_014471|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##AM392568|BAG1|573|BCL2-associated athanogene##BC014774|BAG1|573|BCL2-associated athanogene##AK096038|BAG1|573|BCL2-associated athanogene##AK316577|BAG1|573|BCL2-associated athanogene##AF116273|BAG1|573|BCL2-associated athanogene##AK222749|BAG1|573|BCL2-associated athanogene##AF022224|BAG1|573|BCL2-associated athanogene##U46917|BAG1|573|BCL2-associated athanogene##BC001936|BAG1|573|BCL2-associated athanogene##Z35491|BAG1|573|BCL2-associated athanogene##NM_001172415|BAG1|573|BCL2-associated athanogene##NM_004323|BAG1|573|BCL2-associated athanogene##NM_001195536|CHMP5|51510|charged multivesicular body protein 5##NM_016410|CHMP5|51510|charged multivesicular body protein 5##BC016698|CHMP5|51510|charged multivesicular body protein 5##BC007457|CHMP5|51510|charged multivesicular body protein 5##AK315455|CHMP5|51510|charged multivesicular body protein 5##AK024753|CHMP5|51510|charged multivesicular body protein 5##BC018603|CHMP5|51510|charged multivesicular body protein 5##BC021168|CHMP5|51510|charged multivesicular body protein 5##AK295744|CHMP5|51510|charged multivesicular body protein 5	0.998284	CTCF.p2:14:0.998
chr2	97617028	97617139	reg1002335.p1	14.983	+	BC038583 BC051379 NM_016490	-53234	-	AF151068 NM_001172667	-56207	-	TSC_hg19_v1_chr2_-_97535818 AY358842 NM_017789	-81322	-	NM_001122646	35217	-	TSC_hg19_v1_chr2_-_97760578 AK295056 BC064511 NM_199336	143508	-	AY358571 NM_001164315 BX647769 TSC_hg19_v1_chr2_+_97779310 AK304740 AK316541 AK307629 BC046186 BC128262 BC128517 CU692324	162270	+	BC038583|FAM178B|51252|family with sequence similarity 178, member B##BC051379|FAM178B|51252|family with sequence similarity 178, member B##NM_016490|FAM178B|51252|family with sequence similarity 178, member B##AF151068|FAM178B|51252|family with sequence similarity 178, member B##NM_001172667|FAM178B|51252|family with sequence similarity 178, member B##AY358842|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##NM_017789|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##NM_001122646|FAM178B|51252|family with sequence similarity 178, member B##AK295056|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##BC064511|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##NM_199336|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##AY358571|ANKRD36|375248|ankyrin repeat domain 36##NM_001164315|ANKRD36|375248|ankyrin repeat domain 36##BX647769|ANKRD36|375248|ankyrin repeat domain 36##AK304740|ANKRD36|375248|ankyrin repeat domain 36##AK316541|ANKRD36|375248|ankyrin repeat domain 36##AK307629|ANKRD36|375248|ankyrin repeat domain 36##BC046186|ANKRD36|375248|ankyrin repeat domain 36##BC128262|ANKRD36|375248|ankyrin repeat domain 36##BC128517|ANKRD36|375248|ankyrin repeat domain 36	1.008574	CTCF.p2:8:0.997
chr16	75032478	75032622	reg1003165.p1	14.978	+	TSC_hg19_v1_chr16_-_75019011 NM_030581	-13525	-	CU678744 TSC_hg19_v1_chr16_-_75018978 BC004519	-13591	-	BC017049 TSC_hg19_v1_chr16_-_74808722 AK058016 AK303878 NM_024306	-223826	-	TSC_hg19_v1_chr16_+_75032911 NM_032268	344	+	TSC_hg19_v1_chr16_+_75033257 AK294434 BC007235 AF378524 AL136903	710	+	CU690528 TSC_hg19_v1_chr16_-_75150650 BC040279	118087	-	NM_030581|WDR59|79726|WD repeat domain 59##BC004519|WDR59|79726|WD repeat domain 59##BC017049|FA2H|79152|fatty acid 2-hydroxylase##AK058016|FA2H|79152|fatty acid 2-hydroxylase##AK303878|FA2H|79152|fatty acid 2-hydroxylase##NM_024306|FA2H|79152|fatty acid 2-hydroxylase##NM_032268|ZNRF1|84937|zinc and ring finger 1##AK294434|ZNRF1|84937|zinc and ring finger 1##BC007235|ZNRF1|84937|zinc and ring finger 1##AF378524|ZNRF1|84937|zinc and ring finger 1##AL136903|ZNRF1|84937|zinc and ring finger 1##BC040279|LDHD|197257|lactate dehydrogenase D	0.995136	CTCF.p2:-14:0.995
chr19	35986364	35986502	reg1003103.p1	14.978	+	AM392574 AM392667 AM392672 AM392738 AM392847 AM392851 AM393397 AM393477 AY359007 HQ258707 BC130501 NM_001244847 NM_207392	-5045	-	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	-45816	+	AK290710 NM_005304 BC035657	-136939	+	AY622964 AY789707 AF086315 AL832080 NM_001035516	6372	-	AY789698 AY789699 AY789700 AY789701 AY789702 AY789703 AY789704 AY789705 AY789706 BC011886 TSC_hg19_v1_chr19_-_36001373 AK096215 AK304668 AK316475 EF158323 NM_001126059 EF158324 EF158325 EF158326	14940	-	BC035311 AY358412 NM_001126056 NM_001126057 NM_001126058 NM_001190347 NM_001190348 NM_001190349 NM_033317	18123	-	AM392574|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392667|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392672|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392738|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392847|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392851|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393397|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393477|KRTDAP|388533|keratinocyte differentiation-associated protein##AY359007|KRTDAP|388533|keratinocyte differentiation-associated protein##HQ258707|KRTDAP|388533|keratinocyte differentiation-associated protein##BC130501|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_001244847|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_207392|KRTDAP|388533|keratinocyte differentiation-associated protein##AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2##AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##AY622964|DMKN|93099|dermokine##AY789707|DMKN|93099|dermokine##AF086315|DMKN|93099|dermokine##AL832080|DMKN|93099|dermokine##NM_001035516|DMKN|93099|dermokine##AY789698|DMKN|93099|dermokine##AY789699|DMKN|93099|dermokine##AY789700|DMKN|93099|dermokine##AY789701|DMKN|93099|dermokine##AY789702|DMKN|93099|dermokine##AY789703|DMKN|93099|dermokine##AY789704|DMKN|93099|dermokine##AY789705|DMKN|93099|dermokine##AY789706|DMKN|93099|dermokine##BC011886|DMKN|93099|dermokine##AK096215|DMKN|93099|dermokine##AK304668|DMKN|93099|dermokine##AK316475|DMKN|93099|dermokine##EF158323|DMKN|93099|dermokine##NM_001126059|DMKN|93099|dermokine##EF158324|DMKN|93099|dermokine##EF158325|DMKN|93099|dermokine##EF158326|DMKN|93099|dermokine##BC035311|DMKN|93099|dermokine##AY358412|DMKN|93099|dermokine##NM_001126056|DMKN|93099|dermokine##NM_001126057|DMKN|93099|dermokine##NM_001126058|DMKN|93099|dermokine##NM_001190347|DMKN|93099|dermokine##NM_001190348|DMKN|93099|dermokine##NM_001190349|DMKN|93099|dermokine##NM_033317|DMKN|93099|dermokine	0.465343	CTCF.p2:14:0.465
chr11	60737905	60738046	reg1003414.p1	14.975	+	BC037974 BC025710 AF135600 AB020598 NM_016582	-18789	-	TSC_hg19_v1_chr11_+_60691945 NM_017870 NM_178031 AK000546 BC114569 BC032059	-46040	+	TSC_hg19_v1_chr11_+_60681647 AX775851 BC001309 AX775849	-56307	+	NM_006725 TSC_hg19_v1_chr11_+_60739236 AK128419 AK312749 BC078669 BC033755 X60992 AK292704 DQ786329 DQ786330 U66142 U66145 U66146	1250	+	NM_014207 AY541703 TSC_hg19_v1_chr11_+_60869960 AK292698 X04391 BC027901 DQ892077 DQ895270	132004	+	BC141827 BC142702 AK097326 TSC_hg19_v1_chr11_-_60928910 NM_017966 AL834261 AK302384	190955	-	BC037974|SLC15A3|51296|solute carrier family 15, member 3##BC025710|SLC15A3|51296|solute carrier family 15, member 3##AF135600|SLC15A3|51296|solute carrier family 15, member 3##AB020598|SLC15A3|51296|solute carrier family 15, member 3##NM_016582|SLC15A3|51296|solute carrier family 15, member 3##NM_017870|TMEM132A|54972|transmembrane protein 132A##NM_178031|TMEM132A|54972|transmembrane protein 132A##AK000546|TMEM132A|54972|transmembrane protein 132A##BC114569|TMEM132A|54972|transmembrane protein 132A##BC032059|TMEM132A|54972|transmembrane protein 132A##AX775851|TMEM109|79073|transmembrane protein 109##BC001309|TMEM109|79073|transmembrane protein 109##AX775849|TMEM109|79073|transmembrane protein 109##NM_006725|CD6|923|CD6 molecule##AK128419|CD6|923|CD6 molecule##AK312749|CD6|923|CD6 molecule##BC078669|CD6|923|CD6 molecule##BC033755|CD6|923|CD6 molecule##X60992|CD6|923|CD6 molecule##AK292704|CD6|923|CD6 molecule##DQ786329|CD6|923|CD6 molecule##DQ786330|CD6|923|CD6 molecule##U66142|CD6|923|CD6 molecule##U66145|CD6|923|CD6 molecule##U66146|CD6|923|CD6 molecule##NM_014207|CD5|921|CD5 molecule##AY541703|CD5|921|CD5 molecule##AK292698|CD5|921|CD5 molecule##X04391|CD5|921|CD5 molecule##BC027901|CD5|921|CD5 molecule##DQ892077|CD5|921|CD5 molecule##DQ895270|CD5|921|CD5 molecule##BC141827|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##BC142702|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK097326|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_017966|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AL834261|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK302384|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)	0.999419	CTCF.p2:-4:0.999
chr14	66291552	66291664	reg1001811.p2	14.975	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-411883	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-412120	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-412282	-	AB037806 AF272663 NM_001024218 NM_020806	682516	+	TSC_hg19_v1_chr14_+_66974859 AK025169	683245	+	TSC_hg19_v1_chr14_+_66974870 AK315569	683261	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.971341	CTCF.p2:-1:0.971
chr20	3691646	3691782	reg1003113.p1	14.974	+	AF230073 BC141884 NM_023068	-3940	-	AY223855 AY223851 AY223850 AK095953 AK126498 AK304037 AF466287 AK123015 AK226148 BC125112 BC125113 AK300429 AY223853 AF466289 AB055891 AY223852 AY223854 NM_025220 NM_153202 AY358314 BC062663	-28954	-	AF253318 AJ291673 AJ291674 AJ291675 NM_022139 NM_145762 BC172271 BC172567	-47664	-	NM_001197327 NM_052970 AK297120 TSC_hg19_v1_chr20_+_3713341 AK301294 BC090857 BC110881 AK056712 BC117284 BC126263 BC143932	21653	+	TSC_hg19_v1_chr20_-_3748383 BC012196 AK124341 BC024036 AK000557 AK024220 AK225109 AK308520 BC069204 NM_001039140	56695	-	BC022476 AL080154 EF560745 NM_015417 AK313766	70372	-	AF230073|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##BC141884|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##NM_023068|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##AY223855|ADAM33|80332|ADAM metallopeptidase domain 33##AY223851|ADAM33|80332|ADAM metallopeptidase domain 33##AY223850|ADAM33|80332|ADAM metallopeptidase domain 33##AK095953|ADAM33|80332|ADAM metallopeptidase domain 33##AK126498|ADAM33|80332|ADAM metallopeptidase domain 33##AK304037|ADAM33|80332|ADAM metallopeptidase domain 33##AF466287|ADAM33|80332|ADAM metallopeptidase domain 33##AK123015|ADAM33|80332|ADAM metallopeptidase domain 33##AK226148|ADAM33|80332|ADAM metallopeptidase domain 33##BC125112|ADAM33|80332|ADAM metallopeptidase domain 33##BC125113|ADAM33|80332|ADAM metallopeptidase domain 33##AK300429|ADAM33|80332|ADAM metallopeptidase domain 33##AY223853|ADAM33|80332|ADAM metallopeptidase domain 33##AF466289|ADAM33|80332|ADAM metallopeptidase domain 33##AB055891|ADAM33|80332|ADAM metallopeptidase domain 33##AY223852|ADAM33|80332|ADAM metallopeptidase domain 33##AY223854|ADAM33|80332|ADAM metallopeptidase domain 33##NM_025220|ADAM33|80332|ADAM metallopeptidase domain 33##NM_153202|ADAM33|80332|ADAM metallopeptidase domain 33##AY358314|ADAM33|80332|ADAM metallopeptidase domain 33##BC062663|ADAM33|80332|ADAM metallopeptidase domain 33##AF253318|GFRA4|64096|GDNF family receptor alpha 4##AJ291673|GFRA4|64096|GDNF family receptor alpha 4##AJ291674|GFRA4|64096|GDNF family receptor alpha 4##AJ291675|GFRA4|64096|GDNF family receptor alpha 4##NM_022139|GFRA4|64096|GDNF family receptor alpha 4##NM_145762|GFRA4|64096|GDNF family receptor alpha 4##BC172271|GFRA4|64096|GDNF family receptor alpha 4##BC172567|GFRA4|64096|GDNF family receptor alpha 4##NM_001197327|HSPA12B|116835|heat shock 70kD protein 12B##NM_052970|HSPA12B|116835|heat shock 70kD protein 12B##AK297120|HSPA12B|116835|heat shock 70kD protein 12B##AK301294|HSPA12B|116835|heat shock 70kD protein 12B##BC090857|HSPA12B|116835|heat shock 70kD protein 12B##BC110881|HSPA12B|116835|heat shock 70kD protein 12B##AK056712|HSPA12B|116835|heat shock 70kD protein 12B##BC117284|HSPA12B|116835|heat shock 70kD protein 12B##BC126263|HSPA12B|116835|heat shock 70kD protein 12B##BC143932|HSPA12B|116835|heat shock 70kD protein 12B##BC012196|C20orf27|54976|chromosome 20 open reading frame 27##AK124341|C20orf27|54976|chromosome 20 open reading frame 27##BC024036|C20orf27|54976|chromosome 20 open reading frame 27##AK000557|C20orf27|54976|chromosome 20 open reading frame 27##AK024220|C20orf27|54976|chromosome 20 open reading frame 27##AK225109|C20orf27|54976|chromosome 20 open reading frame 27##AK308520|C20orf27|54976|chromosome 20 open reading frame 27##BC069204|C20orf27|54976|chromosome 20 open reading frame 27##NM_001039140|C20orf27|54976|chromosome 20 open reading frame 27##BC022476|SPEF1|25876|sperm flagellar 1##AL080154|SPEF1|25876|sperm flagellar 1##EF560745|SPEF1|25876|sperm flagellar 1##NM_015417|SPEF1|25876|sperm flagellar 1##AK313766|SPEF1|25876|sperm flagellar 1	0.999828	CTCF.p2:6:1.000
chr11	111852858	111852987	reg1002809.p1	14.972	+	TSC_hg19_v1_chr11_+_111848069 NM_033425 AK289807 BC033034 AB051522	-4856	+	TSC_hg19_v1_chr11_+_111808066 BC035509 BC064479 BC128600	-44839	+	TSC_hg19_v1_chr11_+_111807932 DQ642016 NM_001037954	-45014	+	AK057299 NM_001931	42615	+	TSC_hg19_v1_chr11_+_111896166 AK296274 AK303930 AK297103 AF317200 AK223596 AL832703 BC039084 DQ892447 DQ895658 CU691660 Y00978 AK299562	43286	+	AK300496 NM_001082619 NM_138789	91903	-	NM_033425|DIXDC1|85458|DIX domain containing 1##AK289807|DIXDC1|85458|DIX domain containing 1##BC033034|DIXDC1|85458|DIX domain containing 1##AB051522|DIXDC1|85458|DIX domain containing 1##BC035509|DIXDC1|85458|DIX domain containing 1##BC064479|DIXDC1|85458|DIX domain containing 1##BC128600|DIXDC1|85458|DIX domain containing 1##DQ642016|DIXDC1|85458|DIX domain containing 1##NM_001037954|DIXDC1|85458|DIX domain containing 1##AK057299|DLAT|1737|dihydrolipoamide S-acetyltransferase##NM_001931|DLAT|1737|dihydrolipoamide S-acetyltransferase##AK296274|DLAT|1737|dihydrolipoamide S-acetyltransferase##AK303930|DLAT|1737|dihydrolipoamide S-acetyltransferase##AK297103|DLAT|1737|dihydrolipoamide S-acetyltransferase##AF317200|DLAT|1737|dihydrolipoamide S-acetyltransferase##AK223596|DLAT|1737|dihydrolipoamide S-acetyltransferase##AL832703|DLAT|1737|dihydrolipoamide S-acetyltransferase##BC039084|DLAT|1737|dihydrolipoamide S-acetyltransferase##DQ892447|DLAT|1737|dihydrolipoamide S-acetyltransferase##DQ895658|DLAT|1737|dihydrolipoamide S-acetyltransferase##Y00978|DLAT|1737|dihydrolipoamide S-acetyltransferase##AK299562|DLAT|1737|dihydrolipoamide S-acetyltransferase##AK300496|PIH1D2|120379|PIH1 domain containing 2##NM_001082619|PIH1D2|120379|PIH1 domain containing 2##NM_138789|PIH1D2|120379|PIH1 domain containing 2	0.273359	CTCF.p2:1:0.273
chr4	175553446	175553573	reg1003209.p1	14.970	+	AK300524 NM_000860 NM_001145816	-109718	-	U63296 X82460 BC007691 BC018986 J05594 L76465 AK058013 AK300940 AK314624 AK300125 TSC_hg19_v1_chr4_-_175443639	-109889	-	BC014903 NM_012180 AK123740	-348102	-	U93917 BC036086 NM_001042543 NM_006529	196911	-	NM_001130703 NM_001130704 NM_001130705 NM_014269 AK292410 BC036070	286024	+	CU692222 CU692662 DQ892372 DQ895581 TSC_hg19_v1_chr4_-_176733403	1179884	-	AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##U63296|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##X82460|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC007691|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC018986|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##J05594|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##L76465|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK058013|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300940|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK314624|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300125|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC014903|FBXO8|26269|F-box protein 8##NM_012180|FBXO8|26269|F-box protein 8##AK123740|FBXO8|26269|F-box protein 8##U93917|GLRA3|8001|glycine receptor, alpha 3##BC036086|GLRA3|8001|glycine receptor, alpha 3##NM_001042543|GLRA3|8001|glycine receptor, alpha 3##NM_006529|GLRA3|8001|glycine receptor, alpha 3##NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29##NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29##AK292410|ADAM29|11086|ADAM metallopeptidase domain 29##BC036070|ADAM29|11086|ADAM metallopeptidase domain 29##DQ892372|GPM6A|2823|glycoprotein M6A##DQ895581|GPM6A|2823|glycoprotein M6A	0.647348	CTCF.p2:2:0.647
chr1	111173511	111173628	reg1002247.p1	14.969	+	AK290061 NM_004974 TSC_hg19_v1_chr1_-_111148981	-24587	-	NM_005549	-111773	-	AY358683 AF333024 NM_032414 AY029225 BC025399 DQ891570 DQ894763	-179778	+	BC043564 NM_001204269	526	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	43783	-	TSC_hg19_v1_chr1_-_111217553 AK314009	43975	-	AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_005549|KCNA10|3744|potassium voltage-gated channel, shaker-related subfamily, member 10##AY358683|PROK1|84432|prokineticin 1##AF333024|PROK1|84432|prokineticin 1##NM_032414|PROK1|84432|prokineticin 1##AY029225|PROK1|84432|prokineticin 1##BC025399|PROK1|84432|prokineticin 1##DQ891570|PROK1|84432|prokineticin 1##DQ894763|PROK1|84432|prokineticin 1##BC043564|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_001204269|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3	0.999665	CTCF.p2:-4:1.000
chr12	9966904	9967031	reg1002788.p1	14.969	+	AY238518 CU675505 DQ893175 DQ896474 L07555 AK291869 AK303174 AK303383 BC007037 NM_001781 Z22576	-53512	-	AF518873 BC093857 BC093859 NM_001253748 NM_001253750 NM_172004	-81091	-	BC063128 NM_001197318 NM_013269 AK310150 NM_001004419 AK310554 AK313554 BC019883 AF133299 AF285087 CU676474 FN813349 FN813350 FN813351 NM_001197317 NM_001197319	-144700	+	AF175206 AF175207 AF267244 AF267245 NM_016523 AJ305370 BC096734 BC098166 BC098257 BC098354	13129	+	X96719 AY142147 AB015628 BC005254 AK311232 TSC_hg19_v1_chr12_-_10021954 AK313916 AK307334	54991	-	NM_005127	55490	-	AY238518|CD69|969|CD69 molecule##DQ893175|CD69|969|CD69 molecule##DQ896474|CD69|969|CD69 molecule##L07555|CD69|969|CD69 molecule##AK291869|CD69|969|CD69 molecule##AK303174|CD69|969|CD69 molecule##AK303383|CD69|969|CD69 molecule##BC007037|CD69|969|CD69 molecule##NM_001781|CD69|969|CD69 molecule##Z22576|CD69|969|CD69 molecule##AF518873|CLECL1|160365|C-type lectin-like 1##BC093857|CLECL1|160365|C-type lectin-like 1##BC093859|CLECL1|160365|C-type lectin-like 1##NM_001253748|CLECL1|160365|C-type lectin-like 1##NM_001253750|CLECL1|160365|C-type lectin-like 1##NM_172004|CLECL1|160365|C-type lectin-like 1##BC063128|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D##NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D##AK310150|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D##AK310554|CLEC2D|29121|C-type lectin domain family 2, member D##AK313554|CLEC2D|29121|C-type lectin domain family 2, member D##BC019883|CLEC2D|29121|C-type lectin domain family 2, member D##AF133299|CLEC2D|29121|C-type lectin domain family 2, member D##AF285087|CLEC2D|29121|C-type lectin domain family 2, member D##FN813349|CLEC2D|29121|C-type lectin domain family 2, member D##FN813350|CLEC2D|29121|C-type lectin domain family 2, member D##FN813351|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D##AF175206|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF175207|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267244|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267245|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##NM_016523|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AJ305370|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC096734|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098166|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098257|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098354|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##X96719|CLEC2B|9976|C-type lectin domain family 2, member B##AY142147|CLEC2B|9976|C-type lectin domain family 2, member B##AB015628|CLEC2B|9976|C-type lectin domain family 2, member B##BC005254|CLEC2B|9976|C-type lectin domain family 2, member B##AK311232|CLEC2B|9976|C-type lectin domain family 2, member B##AK313916|CLEC2B|9976|C-type lectin domain family 2, member B##AK307334|CLEC2B|9976|C-type lectin domain family 2, member B##NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B	0.0	
chr1	55276251	55276382	reg1002043.p2	14.969	+	AK097520 NM_001110533 NM_152607 BC039109 BC064142	-4562	+	AK000626 NM_001114108 NM_017904	-9411	-	BC007956 AK289679 TSC_hg19_v1_chr1_-_55230197 BC011758 NM_152268	-46124	-	TSC_hg19_v1_chr1_-_55331351 AK298414	55035	-	AK316419 TSC_hg19_v1_chr1_-_55352418 AK302774 AK304437 AK316427	76200	-	CU678696 CU680002 AB385266 DQ893405 DQ896723 TSC_hg19_v1_chr1_-_55352808	76487	-	AK097520|C1orf177|163747|chromosome 1 open reading frame 177##NM_001110533|C1orf177|163747|chromosome 1 open reading frame 177##NM_152607|C1orf177|163747|chromosome 1 open reading frame 177##BC039109|C1orf177|163747|chromosome 1 open reading frame 177##BC064142|C1orf177|163747|chromosome 1 open reading frame 177##AK000626|TTC22|55001|tetratricopeptide repeat domain 22##NM_001114108|TTC22|55001|tetratricopeptide repeat domain 22##NM_017904|TTC22|55001|tetratricopeptide repeat domain 22##BC007956|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##AK289679|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##BC011758|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##NM_152268|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##AK298414|DHCR24|1718|24-dehydrocholesterol reductase##AK316419|DHCR24|1718|24-dehydrocholesterol reductase##AK302774|DHCR24|1718|24-dehydrocholesterol reductase##AK304437|DHCR24|1718|24-dehydrocholesterol reductase##AK316427|DHCR24|1718|24-dehydrocholesterol reductase##DQ893405|DHCR24|1718|24-dehydrocholesterol reductase##DQ896723|DHCR24|1718|24-dehydrocholesterol reductase	0.0	
chr19	46110653	46110780	reg1002218.p1	14.969	+	TSC_hg19_v1_chr19_-_46105467 BC038450 NM_005282 AK296429	-5262	-	AK290698 TSC_hg19_v1_chr19_-_46105429	-5293	-	TSC_hg19_v1_chr19_-_46088084 AK098798 NM_001017989 NM_025136	-22612	-	AL096717 TSC_hg19_v1_chr19_-_46142656 BC032630 AK026616 AK308403 AK304299 AK225043	31935	-	TSC_hg19_v1_chr19_-_46142667 AF103939 NM_012155	31958	-	NM_001242348 BC007358	34210	+	BC038450|GPR4|2828|G protein-coupled receptor 4##NM_005282|GPR4|2828|G protein-coupled receptor 4##AK290698|GPR4|2828|G protein-coupled receptor 4##AK098798|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##NM_001017989|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##NM_025136|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##AL096717|EML2|24139|echinoderm microtubule associated protein like 2##BC032630|EML2|24139|echinoderm microtubule associated protein like 2##AK026616|EML2|24139|echinoderm microtubule associated protein like 2##AK308403|EML2|24139|echinoderm microtubule associated protein like 2##AK304299|EML2|24139|echinoderm microtubule associated protein like 2##AK225043|EML2|24139|echinoderm microtubule associated protein like 2##AF103939|EML2|24139|echinoderm microtubule associated protein like 2##NM_012155|EML2|24139|echinoderm microtubule associated protein like 2##NM_001242348|LOC100287177|100287177|uncharacterized LOC100287177##BC007358|LOC100287177|100287177|uncharacterized LOC100287177	0.388278	CTCF.p2:-21:0.388
chr6	24856354	24856482	reg1002306.p1	14.969	+	NM_001251991	-80778	+	TSC_hg19_v1_chr6_+_24775164 AK021685 NM_001251989 NM_001251990 NM_015895 AK315743 BC005389 BC005185	-81224	+	AK022681 AB075502 AL136632 NM_030939	-137074	-	U49187 AK300138 BC001232 NM_015864	21099	-	AB002384 NM_014722	54776	-	TSC_hg19_v1_chr6_-_24936189 AK299047	79765	-	NM_001251991|GMNN|51053|geminin, DNA replication inhibitor##AK021685|GMNN|51053|geminin, DNA replication inhibitor##NM_001251989|GMNN|51053|geminin, DNA replication inhibitor##NM_001251990|GMNN|51053|geminin, DNA replication inhibitor##NM_015895|GMNN|51053|geminin, DNA replication inhibitor##AK315743|GMNN|51053|geminin, DNA replication inhibitor##BC005389|GMNN|51053|geminin, DNA replication inhibitor##BC005185|GMNN|51053|geminin, DNA replication inhibitor##AK022681|C6orf62|81688|chromosome 6 open reading frame 62##AB075502|C6orf62|81688|chromosome 6 open reading frame 62##AL136632|C6orf62|81688|chromosome 6 open reading frame 62##NM_030939|C6orf62|81688|chromosome 6 open reading frame 62##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##AK299047|FAM65B|9750|family with sequence similarity 65, member B	0.970711	CTCF.p2:-7:0.971
chr20	61603789	61603903	reg1001822.p1	14.967	+	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-19721	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-19816	+	TSC_hg19_v1_chr20_+_61569501 NM_017896 BC032120 AK299509 AK000609	-34390	+	BC137288 BC137308 NM_080606	34540	-	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	243677	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	263495	+	AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##NM_017896|C20orf11|54994|chromosome 20 open reading frame 11##BC032120|C20orf11|54994|chromosome 20 open reading frame 11##AK299509|C20orf11|54994|chromosome 20 open reading frame 11##AK000609|C20orf11|54994|chromosome 20 open reading frame 11##BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7	0.136173	
chr8	28479844	28479960	reg1002285.p1	14.967	+	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	-128137	+	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	-132123	-	AK002050 AK023418 NM_018660 AB057659 AB073627	-235941	-	TSC_hg19_v1_chr8_+_28559032 AB011091	79173	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	79248	+	TSC_hg19_v1_chr8_-_28747454 BC016687 AK225072 AK304525 AK298468 NM_001172562 BC025267 AK300593 AK295977 AK001733 AK225530	267558	-	NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##AB011091|EXTL3|2137|exostoses (multiple)-like 3##AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3##BC016687|INTS9|55756|integrator complex subunit 9##AK225072|INTS9|55756|integrator complex subunit 9##AK304525|INTS9|55756|integrator complex subunit 9##AK298468|INTS9|55756|integrator complex subunit 9##NM_001172562|INTS9|55756|integrator complex subunit 9##BC025267|INTS9|55756|integrator complex subunit 9##AK300593|INTS9|55756|integrator complex subunit 9##AK295977|INTS9|55756|integrator complex subunit 9##AK001733|INTS9|55756|integrator complex subunit 9##AK225530|INTS9|55756|integrator complex subunit 9	0.588291	CTCF.p2:8:0.577
chr8	3142229	3142357	reg1003351.p1	14.967	+	AK128880 TSC_hg19_v1_chr8_-_2585966	-556311	-	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-1149091	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-1189385	+	AY017307 TSC_hg19_v1_chr8_-_4852228	1709932	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	1710001	-	TSC_hg19_v1_chr8_-_6264053 BC036625	3121764	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.925736	CTCF.p2:-4:0.926
chr18	43460034	43460158	reg1003097.p1	14.965	+	AK172835 NM_213602 AY971516 AK290402 AK290400 AK095432	-54472	+	NM_001146037	-153179	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	-155939	+	AB046852 TSC_hg19_v1_chr18_-_43547294 NM_020964	87182	-	DQ893199 DQ893200 DQ893201 DQ893695 DQ896527 DQ896528 DQ896529 TSC_hg19_v1_chr18_-_43652247 BC035395 BC008216 NM_024430	192112	-	TSC_hg19_v1_chr18_-_43668143 AK129804	208081	-	AK172835|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_213602|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AY971516|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290402|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290400|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK095432|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AB046852|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##NM_020964|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##DQ893199|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893200|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893201|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893695|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896527|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896528|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896529|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##BC035395|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##NM_024430|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##AK129804|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	0.999731	CTCF.p2:10:1.000
chr17	28106376	28106504	reg1002755.p1	14.964	+	TSC_hg19_v1_chr17_-_28088446 BC011636	-17982	-	BC028205 TSC_hg19_v1_chr17_-_27949878 AL833952	-156589	-	AK096431 NM_032854	-158048	-	AK302745 AK303060 NM_001145053 AK299608	150456	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	150693	-	NM_198529 BX648689 BC137519	162264	+	BC011636|SSH2|85464|slingshot homolog 2 (Drosophila)##BC028205|CORO6|84940|coronin 6##AL833952|CORO6|84940|coronin 6##AK096431|CORO6|84940|coronin 6##NM_032854|CORO6|84940|coronin 6##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5	0.907229	CTCF.p2:9:0.907
chr3	150945641	150945770	reg1002744.p1	14.964	+	AF002986 BC036815 NM_013308	-24739	-	AF399708 NM_053002 BC144559	-141028	+	TSC_hg19_v1_chr3_+_150803504 AK128165	-142200	+	AK289617 NM_001081455	21244	-	BC034989 D13626 NM_014879	50486	-	AF237763 BC112941 BC117565 AB031548 BC132888 BC132890 AK027784 NM_023915	88869	-	AF002986|GPR171|29909|G protein-coupled receptor 171##BC036815|GPR171|29909|G protein-coupled receptor 171##NM_013308|GPR171|29909|G protein-coupled receptor 171##AF399708|MED12L|116931|mediator complex subunit 12-like##NM_053002|MED12L|116931|mediator complex subunit 12-like##BC144559|MED12L|116931|mediator complex subunit 12-like##AK128165|MED12L|116931|mediator complex subunit 12-like##AK289617|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_001081455|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##AF237763|GPR87|53836|G protein-coupled receptor 87##BC112941|GPR87|53836|G protein-coupled receptor 87##BC117565|GPR87|53836|G protein-coupled receptor 87##AB031548|GPR87|53836|G protein-coupled receptor 87##BC132888|GPR87|53836|G protein-coupled receptor 87##BC132890|GPR87|53836|G protein-coupled receptor 87##AK027784|GPR87|53836|G protein-coupled receptor 87##NM_023915|GPR87|53836|G protein-coupled receptor 87	0.999365	CTCF.p2:-8:0.999
chr22	28416140	28416266	reg1002364.p1	14.963	+	TSC_hg19_v1_chr22_-_28315245 BC018704 D30037 AK313064 CR456541 NM_012399	-100939	-	TSC_hg19_v1_chr22_-_28315203 BC031427	-100996	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	-101029	-	TSC_hg19_v1_chr22_-_29075801 NM_001145418	659590	-	BC004207 AK289360 CR456418 NM_001005735 NM_007194 NM_145862 AK290754 AB164374	721614	-	BC000004 TSC_hg19_v1_chr22_+_29138056 NM_172002 BC065569 CR456462 AY191719 AB528150 CU013013 CU013301	721858	+	BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta##D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta##CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_001145418|TTC28|23331|tetratricopeptide repeat domain 28##BC004207|CHEK2|11200|checkpoint kinase 2##AK289360|CHEK2|11200|checkpoint kinase 2##CR456418|CHEK2|11200|checkpoint kinase 2##NM_001005735|CHEK2|11200|checkpoint kinase 2##NM_007194|CHEK2|11200|checkpoint kinase 2##NM_145862|CHEK2|11200|checkpoint kinase 2##AK290754|CHEK2|11200|checkpoint kinase 2##NM_172002|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##BC065569|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##CR456462|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##AY191719|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)	1.069333	CTCF.p2:-5:0.996
chr3	87019083	87019225	reg1003573.p1	14.963	+	AF538973 NM_153184	-1243523	+	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	-2011025	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-4983852	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	21097	-	BC094780 TSC_hg19_v1_chr3_-_87040272	21116	-	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	257381	+	AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B	0.994297	CTCF.p2:-7:0.994
chr12	2692315	2692425	reg1001846.p1	14.962	+	AB209016 AJ224873 AY830711 AY830712 AY830713 Z34809 Z34810 Z34811 Z34812 Z34813 Z34814 Z34815 Z34816 Z34817 Z34818 Z34819 Z34820 Z34821 Z34822 Z74996 TSC_hg19_v1_chr12_+_2162753	-529642	+	TSC_hg19_v1_chr12_+_2162452 NM_000719 NM_001129827 NM_001129829 NM_001129830 NM_001129831 NM_001129832 NM_001129833 NM_001129834 NM_001129835 NM_001129836 NM_001129837 NM_001129838 NM_001129839 NM_001129840 NM_001129841 NM_001129842 NM_001129843 NM_001129844 NM_001129846 NM_001167623 NM_001167624 NM_001167625 NM_199460 AK309111 AF465484 AK308652 BC146846	-529876	+	TSC_hg19_v1_chr12_-_2113622 AB463561 AK301109 AK056200 AK299203 BC043437 AY146652 NM_152640	-578699	-	TSC_hg19_v1_chr12_+_2904161 NM_002014 AK313918 BC001786 M88279 BC007924	211784	+	TSC_hg19_v1_chr12_+_2904310 AB385011 CU674888 DQ893668 DQ895800	211932	+	NM_018463 TSC_hg19_v1_chr12_+_2921842 AK130319 AK297189 AK291110 AK300905 AK027483 BC006552 BC013399 DQ892711 DQ895963 CU675449 AY599883	229486	+	AB209016|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AJ224873|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830711|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830712|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830713|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34809|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34810|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34811|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34812|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34813|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34814|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34815|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34816|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34817|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34818|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34819|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34820|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34821|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34822|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z74996|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK301109|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK056200|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK299203|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC043437|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AY146652|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_152640|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_002014|FKBP4|2288|FK506 binding protein 4, 59kDa##AK313918|FKBP4|2288|FK506 binding protein 4, 59kDa##BC001786|FKBP4|2288|FK506 binding protein 4, 59kDa##M88279|FKBP4|2288|FK506 binding protein 4, 59kDa##BC007924|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ893668|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ895800|FKBP4|2288|FK506 binding protein 4, 59kDa##NM_018463|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK130319|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK297189|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK291110|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK300905|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK027483|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC006552|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC013399|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ892711|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ895963|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AY599883|ITFG2|55846|integrin alpha FG-GAP repeat containing 2	0.663282	CTCF.p2:1:0.663
chr20	49080874	49081027	reg1002838.p1	14.962	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	-273320	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	-273569	+	NM_005194 TSC_hg19_v1_chr20_+_48807197	-273757	+	TSC_hg19_v1_chr20_+_49126895 AK290638 NM_002827	45926	+	TSC_hg19_v1_chr20_+_49126916 AK316563	45963	+	AK299830 TSC_hg19_v1_chr20_+_49126919	45969	+	EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK290638|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##NM_002827|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK316563|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1	0.717676	CTCF.p2:14:0.718
chr1	28929446	28929600	reg1003014.p1	14.960	+	NM_001193532 AK026009	-10507	+	BC033175 NM_152304 AK312176	-10781	+	BC064589 BC068048 AK092096 BC045792 TSC_hg19_v1_chr1_-_28908385	-21153	-	BC011986 TSC_hg19_v1_chr1_-_28969617 U57693 X84002 AK310097 NM_001135218 NM_005644	40057	-	TSC_hg19_v1_chr1_+_28995244 NM_006582 NM_024482 AK000892	65706	+	BC001473 AK315195 AK315436 AF173868 AF203694 AK023126 TSC_hg19_v1_chr1_+_28995361	65805	+	NM_001193532|RAB42|115273|RAB42, member RAS oncogene family##BC033175|RAB42|115273|RAB42, member RAS oncogene family##NM_152304|RAB42|115273|RAB42, member RAS oncogene family##AK312176|RAB42|115273|RAB42, member RAS oncogene family##BC064589|SNHG12|85028|small nucleolar RNA host gene 12 (non-protein coding)##BC068048|SNHG12|85028|small nucleolar RNA host gene 12 (non-protein coding)##AK092096|SNHG12|85028|small nucleolar RNA host gene 12 (non-protein coding)##BC045792|SNHG12|85028|small nucleolar RNA host gene 12 (non-protein coding)##BC011986|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##U57693|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##X84002|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##AK310097|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##NM_001135218|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##NM_005644|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##NM_006582|GMEB1|10691|glucocorticoid modulatory element binding protein 1##NM_024482|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK000892|GMEB1|10691|glucocorticoid modulatory element binding protein 1##BC001473|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK315195|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK315436|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AF173868|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AF203694|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK023126|GMEB1|10691|glucocorticoid modulatory element binding protein 1	0.994141	CTCF.p2:14:0.994
chr8	1683728	1683865	reg1003106.p1	14.958	+	AF119818 AF119817 NM_004745	-234247	+	AK290264 TSC_hg19_v1_chr8_-_681225 BC046243 NM_207332	-1002565	-	TSC_hg19_v1_chr8_-_681204 AK297476	-1002585	-	NM_018941 TSC_hg19_v1_chr8_+_1711937 AK312486 AF123757 AF123758 AF123759 AF123760 AF123761	28114	+	TSC_hg19_v1_chr8_+_1712012 BC007725	28240	+	TSC_hg19_v1_chr8_+_1772112 AB002292 NM_014629 BC112926 CR749570	88343	+	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##AK290264|ERICH1|157697|glutamate-rich 1##BC046243|ERICH1|157697|glutamate-rich 1##NM_207332|ERICH1|157697|glutamate-rich 1##AK297476|ERICH1|157697|glutamate-rich 1##NM_018941|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AK312486|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123757|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123758|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123759|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123760|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123761|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##BC007725|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AB002292|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##NM_014629|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##BC112926|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##CR749570|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10	0.995198	CTCF.p2:-3:0.995
chr1	16405501	16405612	reg1001851.p1	14.957	+	AB463624 CU691488 AK094085 BC037394 TSC_hg19_v1_chr1_-_16400144 BC016848 NM_182623	-5499	-	AK098217 NM_001165945	-30273	+	NM_000085 AK292335 BC020873 BC033806 Z30644	-35258	+	EU826606 DQ895231 EU176326 TSC_hg19_v1_chr1_-_16482565 M59371 BC037166 AK296788 NM_004431	76970	-	BC040640 NM_153213 AK091281 AX746893 AK297707	133578	-	NM_030907	158102	-	AK094085|FAM131C|348487|family with sequence similarity 131, member C##BC037394|FAM131C|348487|family with sequence similarity 131, member C##BC016848|FAM131C|348487|family with sequence similarity 131, member C##NM_182623|FAM131C|348487|family with sequence similarity 131, member C##AK098217|CLCNKB|1188|chloride channel Kb##NM_001165945|CLCNKB|1188|chloride channel Kb##NM_000085|CLCNKB|1188|chloride channel Kb##AK292335|CLCNKB|1188|chloride channel Kb##BC020873|CLCNKB|1188|chloride channel Kb##BC033806|CLCNKB|1188|chloride channel Kb##Z30644|CLCNKB|1188|chloride channel Kb##EU826606|EPHA2|1969|EPH receptor A2##DQ895231|EPHA2|1969|EPH receptor A2##EU176326|EPHA2|1969|EPH receptor A2##M59371|EPHA2|1969|EPH receptor A2##BC037166|EPHA2|1969|EPH receptor A2##AK296788|EPHA2|1969|EPH receptor A2##NM_004431|EPHA2|1969|EPH receptor A2##BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##NM_030907|RSG1|79363|REM2 and RAB-like small GTPase 1	1.056199	CTCF.p2:-8:0.983
chr22	36576464	36576577	reg1002784.p1	14.957	+	AY014906 AY014907 NM_145641 NM_145642	-14296	-	BC042918 BC038352 AK025349 AF070675 BC070144 AF305227 BC050596 AY014902 AY014903 AY014904 AY014905 NM_145640	-19642	-	AY072786 DQ778625 TSC_hg19_v1_chr22_-_36424553 AK055213 NM_001082578 NM_001082579	-151981	-	AK290466 BC006276 AK313637 AK311506 AY014914 AY014915 NM_030643 NM_145660	24298	-	AF305429 TSC_hg19_v1_chr22_-_36635617 BC004395 AF305225 AK303978 AB208990 AK056938	59071	-	TSC_hg19_v1_chr22_-_36635666 AF324223 NM_030882	59157	-	AY014906|APOL3|80833|apolipoprotein L, 3##AY014907|APOL3|80833|apolipoprotein L, 3##NM_145641|APOL3|80833|apolipoprotein L, 3##NM_145642|APOL3|80833|apolipoprotein L, 3##BC042918|APOL3|80833|apolipoprotein L, 3##BC038352|APOL3|80833|apolipoprotein L, 3##AK025349|APOL3|80833|apolipoprotein L, 3##AF070675|APOL3|80833|apolipoprotein L, 3##AF305227|APOL3|80833|apolipoprotein L, 3##BC050596|APOL3|80833|apolipoprotein L, 3##AY014902|APOL3|80833|apolipoprotein L, 3##AY014903|APOL3|80833|apolipoprotein L, 3##AY014904|APOL3|80833|apolipoprotein L, 3##AY014905|APOL3|80833|apolipoprotein L, 3##NM_145640|APOL3|80833|apolipoprotein L, 3##AY072786|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ778625|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK055213|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082578|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082579|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK290466|APOL4|80832|apolipoprotein L, 4##BC006276|APOL4|80832|apolipoprotein L, 4##AK313637|APOL4|80832|apolipoprotein L, 4##AK311506|APOL4|80832|apolipoprotein L, 4##AY014914|APOL4|80832|apolipoprotein L, 4##AY014915|APOL4|80832|apolipoprotein L, 4##NM_030643|APOL4|80832|apolipoprotein L, 4##NM_145660|APOL4|80832|apolipoprotein L, 4##AF305429|APOL2|23780|apolipoprotein L, 2##BC004395|APOL2|23780|apolipoprotein L, 2##AF305225|APOL2|23780|apolipoprotein L, 2##AK303978|APOL2|23780|apolipoprotein L, 2##AB208990|APOL2|23780|apolipoprotein L, 2##AK056938|APOL2|23780|apolipoprotein L, 2##AF324223|APOL2|23780|apolipoprotein L, 2##NM_030882|APOL2|23780|apolipoprotein L, 2	0.999798	CTCF.p2:1:1.000
chr17	20020093	20020234	reg1001888.p1	14.955	+	AY816328 AY816329 NM_001033553 NM_152904 AB041533	-29829	+	TSC_hg19_v1_chr17_+_19976949 AK314341	-43261	+	TSC_hg19_v1_chr17_+_19912678 AK094274 NM_001243439 AK295093	-107495	+	TSC_hg19_v1_chr17_+_20059384 NM_001033554 NM_001033555 NM_001243438 AK301318 AK304186 AY816326 AY816327 BC021123 BC050058	39171	+	BC033618 TSC_hg19_v1_chr17_+_20108434 AK298601	88271	+	TSC_hg19_v1_chr17_+_20224469 BC036241	204303	+	AY816328|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816329|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033553|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_152904|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AB041533|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK314341|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001243439|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK295093|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033554|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033555|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001243438|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK301318|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK304186|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816326|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816327|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC021123|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC050058|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC033618|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK298601|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC036241|CCDC144C|348254|coiled-coil domain containing 144C	0.99804	CTCF.p2:15:0.998
chr1	201012146	201012267	reg1002738.p1	14.954	+	TSC_hg19_v1_chr1_+_200993085 AK022893 BC037533 BC016656	-19119	+	TSC_hg19_v1_chr1_-_200992826 AB007918 NM_001252100 NM_001252102 NM_001252103 NM_017596	-19375	-	AM177180 AB527174 BC137281 BC144557 TSC_hg19_v1_chr1_-_200992598	-19652	-	L33798 NM_000069	69487	-	TSC_hg19_v1_chr1_-_201123569 AK091726	111365	-	AK075335 AY138587 AK296307 TSC_hg19_v1_chr1_-_201123603 BC001106 AL136600 AK054883 AK303843 NM_016456	111406	-	AB007918|KIF21B|23046|kinesin family member 21B##NM_001252100|KIF21B|23046|kinesin family member 21B##NM_001252102|KIF21B|23046|kinesin family member 21B##NM_001252103|KIF21B|23046|kinesin family member 21B##NM_017596|KIF21B|23046|kinesin family member 21B##AM177180|KIF21B|23046|kinesin family member 21B##BC137281|KIF21B|23046|kinesin family member 21B##BC144557|KIF21B|23046|kinesin family member 21B##L33798|CACNA1S|779|calcium channel, voltage-dependent, L type, alpha 1S subunit##NM_000069|CACNA1S|779|calcium channel, voltage-dependent, L type, alpha 1S subunit##AK091726|TMEM9|252839|transmembrane protein 9##AK075335|TMEM9|252839|transmembrane protein 9##AY138587|TMEM9|252839|transmembrane protein 9##AK296307|TMEM9|252839|transmembrane protein 9##BC001106|TMEM9|252839|transmembrane protein 9##AL136600|TMEM9|252839|transmembrane protein 9##AK054883|TMEM9|252839|transmembrane protein 9##AK303843|TMEM9|252839|transmembrane protein 9##NM_016456|TMEM9|252839|transmembrane protein 9	0.998494	CTCF.p2:15:0.998
chr19	12782963	12783069	reg1002124.p2	14.952	+	NM_032332 TSC_hg19_v1_chr19_+_12780571 AK223195 BC005870 CU675171	-2457	+	AF078861 AF151898 NM_016145	-2560	-	TSC_hg19_v1_chr19_-_12780240 BC001192 AK311944 AF059620 BC042919 BC061912	-2789	-	NM_001206974	9008	-	TSC_hg19_v1_chr19_-_12792673 EU831477 EU831564 CU674162 U26266 U32178 AY336090 L39068 BC000333 U40579 BC014016 U79262	9610	-	TSC_hg19_v1_chr19_-_12792697 AK291553 AK304780	9670	-	NM_032332|WDR83|84292|WD repeat domain 83##AK223195|WDR83|84292|WD repeat domain 83##BC005870|WDR83|84292|WD repeat domain 83##AF078861|WDR83OS|51398|WD repeat domain 83 opposite strand##AF151898|WDR83OS|51398|WD repeat domain 83 opposite strand##NM_016145|WDR83OS|51398|WD repeat domain 83 opposite strand##BC001192|WDR83OS|51398|WD repeat domain 83 opposite strand##AK311944|WDR83OS|51398|WD repeat domain 83 opposite strand##AF059620|WDR83OS|51398|WD repeat domain 83 opposite strand##BC042919|WDR83OS|51398|WD repeat domain 83 opposite strand##BC061912|WDR83OS|51398|WD repeat domain 83 opposite strand##NM_001206974|DHPS|1725|deoxyhypusine synthase##EU831477|DHPS|1725|deoxyhypusine synthase##EU831564|DHPS|1725|deoxyhypusine synthase##U26266|DHPS|1725|deoxyhypusine synthase##U32178|DHPS|1725|deoxyhypusine synthase##AY336090|DHPS|1725|deoxyhypusine synthase##L39068|DHPS|1725|deoxyhypusine synthase##BC000333|DHPS|1725|deoxyhypusine synthase##U40579|DHPS|1725|deoxyhypusine synthase##BC014016|DHPS|1725|deoxyhypusine synthase##U79262|DHPS|1725|deoxyhypusine synthase##AK291553|DHPS|1725|deoxyhypusine synthase##AK304780|DHPS|1725|deoxyhypusine synthase	0.974707	CTCF.p2:1:0.975
chr1	25847082	25847197	reg1002650.p1	14.951	+	TSC_hg19_v1_chr1_+_25757387 AK311472 NM_018202 AY845015 BC007687 AK001609 AY845035 AY845036 BC032427 BC020801	-89654	+	AB018644 AB018645 AB030388 AB049753 AF056965 AF177938 AM295498 AM295506 DQ178642 DQ266353 DQ266400 DQ322275 FR691748 FR691750 GU474431 GU563377 GU810838 HE572747 JF436968 S57967 X63096 X63095 AY603478 X63098 Z97026 BC075081 M34015 AF510065 AF510066 AF510067 AF510068 X54534 NM_020485 NM_138616 NM_138617 NM_138618 BC139905	-99799	-	TSC_hg19_v1_chr1_+_25664821 NM_014313 AK311092 AF087880 AL136627 AK299180 AK311355 AK312588 AY358650 AY071927 BC007341 BC066908 AF081282	-182305	+	TSC_hg19_v1_chr1_+_25870097 AK091219 NM_015627	22952	+	TSC_hg19_v1_chr1_+_25870146 BC029770 AL117654 AB528624	23025	+	AF261655 NM_020379	96819	+	AK311472|TMEM57|55219|transmembrane protein 57##NM_018202|TMEM57|55219|transmembrane protein 57##AY845015|TMEM57|55219|transmembrane protein 57##BC007687|TMEM57|55219|transmembrane protein 57##AK001609|TMEM57|55219|transmembrane protein 57##AY845035|TMEM57|55219|transmembrane protein 57##AY845036|TMEM57|55219|transmembrane protein 57##BC032427|TMEM57|55219|transmembrane protein 57##BC020801|TMEM57|55219|transmembrane protein 57##AB018644|RHCE|6006|Rh blood group, CcEe antigens##AB018645|RHCE|6006|Rh blood group, CcEe antigens##AB030388|RHCE|6006|Rh blood group, CcEe antigens##AB049753|RHCE|6006|Rh blood group, CcEe antigens##AF056965|RHCE|6006|Rh blood group, CcEe antigens##AF177938|RHD|6007|Rh blood group, D antigen##AM295498|RHCE|6006|Rh blood group, CcEe antigens##AM295506|RHCE|6006|Rh blood group, CcEe antigens##DQ178642|RHCE|6006|Rh blood group, CcEe antigens##DQ266353|RHCE|6006|Rh blood group, CcEe antigens##DQ266400|RHCE|6006|Rh blood group, CcEe antigens##DQ322275|RHCE|6006|Rh blood group, CcEe antigens##FR691748|RHCE|6006|Rh blood group, CcEe antigens##FR691750|RHCE|6006|Rh blood group, CcEe antigens##GU474431|RHCE|6006|Rh blood group, CcEe antigens##GU563377|RHCE|6006|Rh blood group, CcEe antigens##GU810838|RHCE|6006|Rh blood group, CcEe antigens##S57967|RHCE|6006|Rh blood group, CcEe antigens##X63096|RHCE|6006|Rh blood group, CcEe antigens##X63095|RHCE|6006|Rh blood group, CcEe antigens##AY603478|RHCE|6006|Rh blood group, CcEe antigens##X63098|RHCE|6006|Rh blood group, CcEe antigens##Z97026|RHD|6007|Rh blood group, D antigen##BC075081|RHCE|6006|Rh blood group, CcEe antigens##M34015|RHCE|6006|Rh blood group, CcEe antigens##AF510065|RHCE|6006|Rh blood group, CcEe antigens##AF510066|RHCE|6006|Rh blood group, CcEe antigens##AF510067|RHCE|6006|Rh blood group, CcEe antigens##AF510068|RHCE|6006|Rh blood group, CcEe antigens##X54534|RHCE|6006|Rh blood group, CcEe antigens##NM_020485|RHCE|6006|Rh blood group, CcEe antigens##NM_138616|RHCE|6006|Rh blood group, CcEe antigens##NM_138617|RHCE|6006|Rh blood group, CcEe antigens##NM_138618|RHCE|6006|Rh blood group, CcEe antigens##BC139905|RHCE|6006|Rh blood group, CcEe antigens##NM_014313|TMEM50A|23585|transmembrane protein 50A##AK311092|TMEM50A|23585|transmembrane protein 50A##AF087880|TMEM50A|23585|transmembrane protein 50A##AL136627|TMEM50A|23585|transmembrane protein 50A##AK299180|TMEM50A|23585|transmembrane protein 50A##AK311355|TMEM50A|23585|transmembrane protein 50A##AK312588|TMEM50A|23585|transmembrane protein 50A##AY358650|TMEM50A|23585|transmembrane protein 50A##AY071927|TMEM50A|23585|transmembrane protein 50A##BC007341|TMEM50A|23585|transmembrane protein 50A##BC066908|TMEM50A|23585|transmembrane protein 50A##AF081282|TMEM50A|23585|transmembrane protein 50A##AK091219|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##NM_015627|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##BC029770|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AL117654|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1	0.999749	CTCF.p2:-2:0.972
chr15	70780485	70780622	reg1003389.p1	14.949	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-390310	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-390326	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-438644	-	TSC_hg19_v1_chr15_-_70878946 BC040579	98391	-	BC016881 AL834243 NM_001008224 AK055435	214074	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	275289	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.579488	CTCF.p2:1:0.579
chr9	95553169	95553313	reg1003194.p1	14.949	+	AB014599 TSC_hg19_v1_chr9_-_95527124 AY052562 NM_001003800 NM_015250 BC073970	-26158	-	TSC_hg19_v1_chr9_-_95432542 BC026154 NM_022755	-120684	-	AF520811 TSC_hg19_v1_chr9_-_95432355 AK023225 AF351202	-120928	-	AK299274 TSC_hg19_v1_chr9_-_95640325 AK091203 AX746846 NM_001007101 AL833202 NM_031486 AK292997 AK309617	87036	-	NM_001083536	156359	+	NM_033086 BX647829 BC111054 AY211386	183508	+	AB014599|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AY052562|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_001003800|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_015250|BICD2|23299|bicaudal D homolog 2 (Drosophila)##BC073970|BICD2|23299|bicaudal D homolog 2 (Drosophila)##BC026154|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##NM_022755|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF520811|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AK023225|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF351202|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AK299274|ZNF484|83744|zinc finger protein 484##AK091203|ZNF484|83744|zinc finger protein 484##NM_001007101|ZNF484|83744|zinc finger protein 484##AL833202|ZNF484|83744|zinc finger protein 484##NM_031486|ZNF484|83744|zinc finger protein 484##AK292997|ZNF484|83744|zinc finger protein 484##AK309617|ZNF484|83744|zinc finger protein 484##NM_001083536|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##NM_033086|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BX647829|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BC111054|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AY211386|FGD3|89846|FYVE, RhoGEF and PH domain containing 3	0.966712	CTCF.p2:5:0.967
chr1	207251256	207251382	reg1002906.p1	14.947	+	AK292883 TSC_hg19_v1_chr1_+_207226619 NM_001018053 NM_006212 AJ005578 AF470623 AB044805 BC112103 BC112105 BC069350 BC069385 BC069583 BC069586 BC069600 BC075075 BC075076	-24682	+	TSC_hg19_v1_chr1_-_207224335 AL833081 BC137166 BC137167 NM_018566	-26960	-	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	-45271	-	NM_001017365 NM_001017366	10892	+	BC005378 NM_000716 NM_001017364 L11245 NM_001017367 AK315137	11302	+	TSC_hg19_v1_chr1_+_207277658 BC022312 NM_000715 AK303798 AK313164 M31452 AK303793	26330	+	AK292883|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_001018053|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_006212|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AJ005578|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AF470623|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AB044805|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112103|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112105|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069350|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069385|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069583|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069586|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069600|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075075|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075076|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AL833081|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137166|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137167|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##NM_018566|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116##NM_001017365|C4BPB|725|complement component 4 binding protein, beta##NM_001017366|C4BPB|725|complement component 4 binding protein, beta##BC005378|C4BPB|725|complement component 4 binding protein, beta##NM_000716|C4BPB|725|complement component 4 binding protein, beta##NM_001017364|C4BPB|725|complement component 4 binding protein, beta##L11245|C4BPB|725|complement component 4 binding protein, beta##NM_001017367|C4BPB|725|complement component 4 binding protein, beta##AK315137|C4BPB|725|complement component 4 binding protein, beta##BC022312|C4BPA|722|complement component 4 binding protein, alpha##NM_000715|C4BPA|722|complement component 4 binding protein, alpha##AK303798|C4BPA|722|complement component 4 binding protein, alpha##AK313164|C4BPA|722|complement component 4 binding protein, alpha##M31452|C4BPA|722|complement component 4 binding protein, alpha##AK303793|C4BPA|722|complement component 4 binding protein, alpha	0.984038	CTCF.p2:13:0.984
chr15	33585041	33585175	reg1003166.p1	14.947	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-224873	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-573942	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-574851	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	18061	+	TSC_hg19_v1_chr15_-_34212524 BC037796	627450	-	AK095198 NM_012125	675980	+	NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5	0.995401	CTCF.p2:-7:0.995
chr3	72715428	72715574	reg1003499.p1	14.946	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-881230	-	AK313656 NM_173359	-911578	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-911979	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	182047	-	BC017274 TSC_hg19_v1_chr3_-_72897575	182074	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	182091	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.019848	
chr9	67029968	67030102	reg1003332.p1	14.946	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-476760	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-535839	-	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	-571539	-	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	896781	+	TSC_hg19_v1_chr9_+_68726468 AK311167	1696467	+	TSC_hg19_v1_chr9_+_69065493 AK311167	2035503	+	BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene	0.92769	CTCF.p2:8:0.928
chrX	148368505	148368630	reg1002928.p1	14.945	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-567955	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-786379	+	BC034320 NM_152578 AY211917 AK098602	-1305712	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	218207	-	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	253863	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	254027	+	AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A	0.960359	CTCF.p2:5:0.960
chr13	24627691	24627832	reg1002976.p1	14.944	+	TSC_hg19_v1_chr13_+_24553943 BX648244 BC043582	-73828	+	BX648445 TSC_hg19_v1_chr13_+_24553892	-73896	+	NM_001007537 CU691876 BC137004 BC137006 BC144450	-156603	-	TSC_hg19_v1_chr13_+_24734858 AK092754 AX747708 NM_001166271 NM_153023 AK055770	107134	+	AK299981 AK301149 TSC_hg19_v1_chr13_+_24825840	198074	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	217137	+	BX648244|SPATA13|221178|spermatogenesis associated 13##NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##AK092754|SPATA13|221178|spermatogenesis associated 13##NM_001166271|SPATA13|221178|spermatogenesis associated 13##NM_153023|SPATA13|221178|spermatogenesis associated 13##AK055770|SPATA13|221178|spermatogenesis associated 13##AK299981|SPATA13|221178|spermatogenesis associated 13##AK301149|SPATA13|221178|spermatogenesis associated 13##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13	0.139592	
chr15	31047357	31047492	reg1003145.p1	14.942	+	BC105788 NM_001039841	-128546	+	TSC_hg19_v1_chr15_+_30918372 BC071990	-129038	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-361712	-	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	148650	+	CR936734 CR936727 TSC_hg19_v1_chr15_+_31196114 AB023235	148693	+	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	236343	-	BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936734|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936727|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AB023235|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10	0.997441	CTCF.p2:8:0.997
chr20	18612977	18613114	reg1002819.p1	14.941	+	TSC_hg19_v1_chr20_+_18568661 NM_080820 BC045167 AK074304 BC100923 BC100924 BC100925 BC100926 AK291440 AF332356 CU692252	-44395	+	BC092494 AK024594 BC015983 TSC_hg19_v1_chr20_+_18548094 BC039422 BC127753 BC127754 BC141963 BC141964 BC150559 BC150560 AF147354	-64945	+	TSC_hg19_v1_chr20_+_18488583 AK299171 BC001575 AK299513 NM_001172745 BC005404	-124419	+	AF418568 AF418570 AX721297 NM_178483 AK130970 AY248902 BC105121 BC112024	181353	+	NM_001242671	197793	-	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	580240	+	NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC092494|LINC00493|388789|long intergenic non-protein coding RNA 493##AK024594|LINC00493|388789|long intergenic non-protein coding RNA 493##BC015983|LINC00493|388789|long intergenic non-protein coding RNA 493##BC039422|LINC00493|388789|long intergenic non-protein coding RNA 493##BC127753|LINC00493|388789|long intergenic non-protein coding RNA 493##BC127754|LINC00493|388789|long intergenic non-protein coding RNA 493##BC141963|LINC00493|388789|long intergenic non-protein coding RNA 493##BC141964|LINC00493|388789|long intergenic non-protein coding RNA 493##BC150559|LINC00493|388789|long intergenic non-protein coding RNA 493##BC150560|LINC00493|388789|long intergenic non-protein coding RNA 493##AF147354|LINC00493|388789|long intergenic non-protein coding RNA 493##AK299171|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC001575|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AK299513|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_001172745|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC005404|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AF418568|C20orf79|140856|chromosome 20 open reading frame 79##AF418570|C20orf79|140856|chromosome 20 open reading frame 79##NM_178483|C20orf79|140856|chromosome 20 open reading frame 79##AK130970|C20orf79|140856|chromosome 20 open reading frame 79##AY248902|C20orf79|140856|chromosome 20 open reading frame 79##BC105121|C20orf79|140856|chromosome 20 open reading frame 79##BC112024|C20orf79|140856|chromosome 20 open reading frame 79##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3	0.996918	CTCF.p2:-10:0.997
chr8	22766602	22766741	reg1002957.p1	14.941	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-215887	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-216166	-	AK294968 AK295834 NM_001199881	-216597	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	18653	-	AK092617 BC034917 NM_001160036	78252	+	NM_001160037	86689	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.758755	CTCF.p2:10:0.759
chr2	234313022	234313144	reg1002612.p1	14.940	+	D73409 NM_003648	-16284	+	TSC_hg19_v1_chr2_+_234263153 D63479	-49871	+	TSC_hg19_v1_chr2_+_234263150 AB078966 NM_152879	-49937	+	AK001647 AJ583821 NM_018218	161133	-	TSC_hg19_v1_chr2_-_234475429 BC067300 AK295112	162334	-	AF462268 NM_019076 AK313488 AF462267 AF030310 AY435143	213238	+	D73409|DGKD|8527|diacylglycerol kinase, delta 130kDa##NM_003648|DGKD|8527|diacylglycerol kinase, delta 130kDa##D63479|DGKD|8527|diacylglycerol kinase, delta 130kDa##AB078966|DGKD|8527|diacylglycerol kinase, delta 130kDa##NM_152879|DGKD|8527|diacylglycerol kinase, delta 130kDa##AK001647|USP40|55230|ubiquitin specific peptidase 40##AJ583821|USP40|55230|ubiquitin specific peptidase 40##NM_018218|USP40|55230|ubiquitin specific peptidase 40##BC067300|USP40|55230|ubiquitin specific peptidase 40##AK295112|USP40|55230|ubiquitin specific peptidase 40##AF462268|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##NM_019076|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AK313488|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AF462267|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AF030310|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AY435143|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8	0.523961	CTCF.p2:-6:0.524
chr15	75092600	75092731	reg1002233.p2	14.939	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	-17809	+	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	-18240	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-51473	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	12507	+	AK024055 NM_001030005 AB072900 BC018026 AY286501	26325	+	TSC_hg19_v1_chr15_-_75135477 AB528889 CU691158 AK075047 BC056423 AK299380	42788	-	X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like##AK024055|CPLX3|594855|complexin 3##NM_001030005|CPLX3|594855|complexin 3##AB072900|CPLX3|594855|complexin 3##BC018026|CPLX3|594855|complexin 3##AY286501|CPLX3|594855|complexin 3##AK075047|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC056423|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK299380|ULK3|25989|unc-51-like kinase 3 (C. elegans)	0.999899	CTCF.p2:12:1.000
chr20	55667284	55667405	reg1002856.p1	14.939	+	TSC_hg19_v1_chr20_+_55204361 BC051829 NM_003222 AK314272 BC035664 U85658 X95693	-462914	+	BC014951 NM_001013646	-559061	+	AK131203 NM_080615	-566364	-	EU679366 AK094784 CU678997 DQ891494 DQ894685 EU176612 AB528364 CU678634 BC008584 M60316 AK312419 AK291186 TSC_hg19_v1_chr20_-_55841286 X51801	173851	-	TSC_hg19_v1_chr20_-_55841684 BC004248 NM_001719	174344	-	AF169385 NM_012444 NM_198265 BC033591 AF149310	237508	+	BC051829|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##NM_003222|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##AK314272|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##BC035664|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##U85658|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##X95693|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##BC014951|FAM209B|388799|family with sequence similarity 209, member B##NM_001013646|FAM209B|388799|family with sequence similarity 209, member B##AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##EU679366|BMP7|655|bone morphogenetic protein 7##AK094784|BMP7|655|bone morphogenetic protein 7##DQ891494|BMP7|655|bone morphogenetic protein 7##DQ894685|BMP7|655|bone morphogenetic protein 7##EU176612|BMP7|655|bone morphogenetic protein 7##BC008584|BMP7|655|bone morphogenetic protein 7##M60316|BMP7|655|bone morphogenetic protein 7##AK312419|BMP7|655|bone morphogenetic protein 7##AK291186|BMP7|655|bone morphogenetic protein 7##X51801|BMP7|655|bone morphogenetic protein 7##BC004248|BMP7|655|bone morphogenetic protein 7##NM_001719|BMP7|655|bone morphogenetic protein 7##AF169385|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_012444|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_198265|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##BC033591|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##AF149310|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	0.960902	CTCF.p2:-13:0.947
chr2	89131346	89131453	reg1001974.p1	14.939	+	BX648045 TSC_hg19_v1_chr2_+_89065391 AL137717 BC031698	-65998	+	TSC_hg19_v1_chr2_+_88991190 NM_144563 AY050633 BC015529	-140184	+	AF110146 BC126354 BC126356 AK128659 TSC_hg19_v1_chr2_-_88926983 AK315287 AF193339 NM_004836	-204421	-	S49006 TSC_hg19_v1_chr2_-_89165772	34313	-	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	53691	+	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	161014	-	BX648045|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AL137717|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##BC031698|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##NM_144563|RPIA|22934|ribose 5-phosphate isomerase A##AY050633|RPIA|22934|ribose 5-phosphate isomerase A##BC015529|RPIA|22934|ribose 5-phosphate isomerase A##AF110146|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126354|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126356|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK128659|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK315287|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AF193339|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##NM_004836|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant	1.100953	CTCF.p2:-13:0.996
chr5	139742889	139743019	reg1003047.p1	14.939	+	AF332961 NM_031467 AF336237 BC136262 BC143602 AF313465 AB032762	-3148	+	M60278 BC033097 TSC_hg19_v1_chr5_-_139726189 AK222688 AK307310 AK313202 NM_001945	-16771	-	TSC_hg19_v1_chr5_-_139725861 EU832647 EU832724	-17066	-	TSC_hg19_v1_chr5_-_139780719 BC079833	37763	-	TSC_hg19_v1_chr5_-_139781027 BC030152	38087	-	TSC_hg19_v1_chr5_+_139781398 NM_001197030 NM_017747 NM_017978 NM_020690 NM_024668	38443	+	AF332961|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##NM_031467|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AF336237|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##BC136262|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##BC143602|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AF313465|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AB032762|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##M60278|HBEGF|1839|heparin-binding EGF-like growth factor##BC033097|HBEGF|1839|heparin-binding EGF-like growth factor##AK222688|HBEGF|1839|heparin-binding EGF-like growth factor##AK307310|HBEGF|1839|heparin-binding EGF-like growth factor##AK313202|HBEGF|1839|heparin-binding EGF-like growth factor##NM_001945|HBEGF|1839|heparin-binding EGF-like growth factor##EU832647|HBEGF|1839|heparin-binding EGF-like growth factor##EU832724|HBEGF|1839|heparin-binding EGF-like growth factor##NM_001197030|ANKHD1|54882|ankyrin repeat and KH domain containing 1##NM_017747|ANKHD1|54882|ankyrin repeat and KH domain containing 1##NM_017978|ANKHD1|54882|ankyrin repeat and KH domain containing 1##NM_020690|ANKHD1-EIF4EBP3|404734|ANKHD1-EIF4EBP3 readthrough##NM_024668|ANKHD1|54882|ankyrin repeat and KH domain containing 1	0.956476	CTCF.p2:-13:0.956
chr3	194403440	194403591	reg1002845.p1	14.938	+	NM_018385	-10310	-	AK002163 TSC_hg19_v1_chr3_-_194392942	-10564	-	TSC_hg19_v1_chr3_-_194392921 BC068500	-10598	-	TSC_hg19_v1_chr3_+_194406619 NM_153690	3108	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	3988	+	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	588335	-	NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##AK002163|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC068500|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1	0.853257	CTCF.p2:-6:0.853
chr8	23447160	23447295	reg1003250.p1	14.938	+	BC033834 BC069168 TSC_hg19_v1_chr8_+_23427607 AF116640	-19676	+	AK074708 AK223194 AF223466 AY032628 BC015013 TSC_hg19_v1_chr8_+_23386513 HQ258387 AK075313 AL833186	-60704	+	TSC_hg19_v1_chr8_+_23386395 BC132799 BC132801	-60813	+	AB464643 AF249669 AF249670 AF249671 AF249672 EU446642 U91540 U80669 BC074863 BC074864 BC111569 BC111574 AF247704 NM_006167 TSC_hg19_v1_chr8_-_23540449	93204	-	AB464642 NM_001136271	116883	-	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	265084	-	BC033834|SLC25A37|51312|solute carrier family 25, member 37##AF116640|SLC25A37|51312|solute carrier family 25, member 37##AK074708|SLC25A37|51312|solute carrier family 25, member 37##AK223194|SLC25A37|51312|solute carrier family 25, member 37##AF223466|SLC25A37|51312|solute carrier family 25, member 37##AY032628|SLC25A37|51312|solute carrier family 25, member 37##BC015013|SLC25A37|51312|solute carrier family 25, member 37##HQ258387|SLC25A37|51312|solute carrier family 25, member 37##AK075313|SLC25A37|51312|solute carrier family 25, member 37##AL833186|SLC25A37|51312|solute carrier family 25, member 37##BC132799|SLC25A37|51312|solute carrier family 25, member 37##BC132801|SLC25A37|51312|solute carrier family 25, member 37##AF249669|NKX3-1|4824|NK3 homeobox 1##AF249670|NKX3-1|4824|NK3 homeobox 1##AF249671|NKX3-1|4824|NK3 homeobox 1##AF249672|NKX3-1|4824|NK3 homeobox 1##EU446642|NKX3-1|4824|NK3 homeobox 1##U91540|NKX3-1|4824|NK3 homeobox 1##U80669|NKX3-1|4824|NK3 homeobox 1##BC074863|NKX3-1|4824|NK3 homeobox 1##BC074864|NKX3-1|4824|NK3 homeobox 1##AF247704|NKX3-1|4824|NK3 homeobox 1##NM_006167|NKX3-1|4824|NK3 homeobox 1##AB464642|NKX2-6|137814|NK2 homeobox 6##NM_001136271|NKX2-6|137814|NK2 homeobox 6##BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1	0.915921	CTCF.p2:0:0.916
chr20	35067965	35068091	reg1002089.p2	14.937	+	NM_014902	-72585	+	TSC_hg19_v1_chr20_+_34894262 AB023181	-173773	+	TSC_hg19_v1_chr20_+_34824402 BC001751 BC019311 NM_015511	-243605	+	TSC_hg19_v1_chr20_+_35089870 NM_001042486 AK001681	21841	+	NM_183006 BC153874 TSC_hg19_v1_chr20_+_35090197 BC108706	22147	+	TSC_hg19_v1_chr20_+_35169892 NM_006097 NM_181526	101858	+	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##AB023181|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC001751|C20orf4|25980|chromosome 20 open reading frame 4##BC019311|C20orf4|25980|chromosome 20 open reading frame 4##NM_015511|C20orf4|25980|chromosome 20 open reading frame 4##NM_001042486|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##AK001681|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_183006|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC153874|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC108706|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_006097|MYL9|10398|myosin, light chain 9, regulatory##NM_181526|MYL9|10398|myosin, light chain 9, regulatory	0.631086	CTCF.p2:9:0.631
chr19	42800308	42800447	reg1003322.p1	14.936	+	TSC_hg19_v1_chr19_+_42788616 AF363689 DQ388764 NM_015125 AB527445	-11648	+	AK300627 TSC_hg19_v1_chr19_-_42759281 AK314278 NM_006494	-41072	-	AB463618 CU692500 DQ893568 DQ896817 TSC_hg19_v1_chr19_-_42759278 BC022231 U15655	-41163	-	BC063021 AK291528 NM_199285	5889	+	AB528706 CR407626 TSC_hg19_v1_chr19_-_42806760 D63391 BC007863 BC003016 NM_002573	6283	-	NM_001145939 TSC_hg19_v1_chr19_-_42806944 NM_001145940	6564	-	AF363689|CIC|23152|capicua homolog (Drosophila)##NM_015125|CIC|23152|capicua homolog (Drosophila)##AK300627|ERF|2077|Ets2 repressor factor##AK314278|ERF|2077|Ets2 repressor factor##NM_006494|ERF|2077|Ets2 repressor factor##DQ893568|ERF|2077|Ets2 repressor factor##DQ896817|ERF|2077|Ets2 repressor factor##BC022231|ERF|2077|Ets2 repressor factor##U15655|ERF|2077|Ets2 repressor factor##BC063021|PRR19|284338|proline rich 19##AK291528|PRR19|284338|proline rich 19##NM_199285|PRR19|284338|proline rich 19##CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	0.943515	CTCF.p2:1:0.944
chr17	76493310	76493435	reg1002916.p1	14.935	+	TSC_hg19_v1_chr17_+_76374729 AK316147 AK307874 AK296882 AK024529 AK225030 AK316405 BC108732 NM_024419 BC035662 AK297156 BC008903 BC015570 BC025951	-118642	+	TSC_hg19_v1_chr17_-_76356159 AK309756 AK314212 BC060858 NM_003955	-137215	-	BC042066 NM_001204210 NM_001204211 NM_001204212 BC148207	-265909	+	NM_173628	80103	-	AK316277 TSC_hg19_v1_chr17_-_76719649	226275	-	TSC_hg19_v1_chr17_-_76719676 AK293894	226379	-	AK316147|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK307874|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK296882|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK024529|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK225030|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK316405|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC108732|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_024419|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC035662|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK297156|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC008903|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC015570|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC025951|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK309756|SOCS3|9021|suppressor of cytokine signaling 3##AK314212|SOCS3|9021|suppressor of cytokine signaling 3##BC060858|SOCS3|9021|suppressor of cytokine signaling 3##NM_003955|SOCS3|9021|suppressor of cytokine signaling 3##BC042066|TMEM235|283999|transmembrane protein 235##NM_001204210|TMEM235|283999|transmembrane protein 235##NM_001204211|TMEM235|283999|transmembrane protein 235##NM_001204212|TMEM235|283999|transmembrane protein 235##BC148207|TMEM235|283999|transmembrane protein 235##NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17##AK316277|CYTH1|9267|cytohesin 1##AK293894|CYTH1|9267|cytohesin 1	0.112091	
chr14	76517286	76517423	reg1002985.p1	14.934	+	TSC_hg19_v1_chr14_+_76452112 NM_001102564 NM_052873 AK302944 AK056735 BC032566 BC010436 BC042852 CU679711	-65262	+	NM_003239	-69263	-	AK313564 TSC_hg19_v1_chr14_-_76447479 X14149 J03241	-69883	-	TSC_hg19_v1_chr14_+_76618258 NM_017926 NM_017972 BC058032	100902	+	TSC_hg19_v1_chr14_+_76618279 AB032978	100923	+	AK000696 TSC_hg19_v1_chr14_+_76618289	100952	+	NM_001102564|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##NM_052873|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##AK302944|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##AK056735|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##BC010436|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##BC042852|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##NM_003239|TGFB3|7043|transforming growth factor, beta 3##AK313564|TGFB3|7043|transforming growth factor, beta 3##X14149|TGFB3|7043|transforming growth factor, beta 3##J03241|TGFB3|7043|transforming growth factor, beta 3##NM_017926|C14orf118|55668|chromosome 14 open reading frame 118##NM_017972|C14orf118|55668|chromosome 14 open reading frame 118##BC058032|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##AK000696|C14orf118|55668|chromosome 14 open reading frame 118	0.879056	CTCF.p2:-20:0.879
chr11	64321068	64321197	reg1003430.p1	14.933	+	TSC_hg19_v1_chr11_+_64126642 AK223561 NM_001006944 NM_003942 AJ010119 AK292163 AK313567 BC047896 AK298507 BC028079 CU690526 AF074715	-194401	+	TSC_hg19_v1_chr11_+_64120348 AK126728	-200773	+	TSC_hg19_v1_chr11_+_64107692 BC151218 BC151222 NM_032251 AK090436 BC140822 BC140824 BC141866	-213430	+	AK290791 BC034384 NM_018484 AK129930	1993	+	AB050269 NM_144585 NM_153378	37149	+	BC043422 TSC_hg19_v1_chr11_-_64377473	56270	-	AK223561|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_001006944|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_003942|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AJ010119|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK292163|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK313567|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC047896|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK298507|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC028079|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AF074715|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK126728|CCDC88B|283234|coiled-coil domain containing 88B##BC151218|CCDC88B|283234|coiled-coil domain containing 88B##BC151222|CCDC88B|283234|coiled-coil domain containing 88B##NM_032251|CCDC88B|283234|coiled-coil domain containing 88B##AK090436|CCDC88B|283234|coiled-coil domain containing 88B##BC140822|CCDC88B|283234|coiled-coil domain containing 88B##BC140824|CCDC88B|283234|coiled-coil domain containing 88B##BC141866|CCDC88B|283234|coiled-coil domain containing 88B##AK290791|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##BC034384|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##NM_018484|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AK129930|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AB050269|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_144585|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_153378|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12	0.993536	CTCF.p2:-6:0.994
chr12	54095705	54095823	reg1002177.p1	14.932	+	NM_001002031	-25253	-	NM_005176	-25656	-	D28402 TSC_hg19_v1_chr12_-_54069859 AK130971	-25888	-	AB040969 TSC_hg19_v1_chr12_-_54121231 AF370415 AY563137 BC003177 AY358397 AL136895 AK122773 AK222646 AK092788 AX747731 AK294424 AK296497 AK309199 AK027881 AK315578 NM_001143682 NM_020898	25490	-	AF255676 NM_017410 BC090850 AF263466 BC002754 BT009908	236868	+	TSC_hg19_v1_chr12_+_54348683 AB464579 NM_173860	252934	+	NM_001002031|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##NM_005176|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##D28402|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##AK130971|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1##BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AF255676|HOXC13|3229|homeobox C13##NM_017410|HOXC13|3229|homeobox C13##BC090850|HOXC13|3229|homeobox C13##AF263466|HOXC13|3229|homeobox C13##BC002754|HOXC13|3229|homeobox C13##BT009908|HOXC13|3229|homeobox C13##NM_173860|HOXC12|3228|homeobox C12	0.975129	CTCF.p2:-14:0.975
chr10	43788803	43788911	reg1000819.p1	14.931	+	BC022548 NM_145313	-26491	-	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	-154915	+	TSC_hg19_v1_chr10_+_43572516 NM_020630 NM_020975 BC003072 BC004257 X15262 AK291807 AB384817 CU678360 CU678648 Y12528	-216254	+	BC054876 AY358584 NM_001184963 NM_173160	78233	+	TSC_hg19_v1_chr10_-_43892200 NM_001098208	103362	-	TSC_hg19_v1_chr10_-_43892677 BC106008	103823	-	BC022548|RASGEF1A|221002|RasGEF domain family, member 1A##NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A##AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_020630|RET|5979|ret proto-oncogene##NM_020975|RET|5979|ret proto-oncogene##BC003072|RET|5979|ret proto-oncogene##BC004257|RET|5979|ret proto-oncogene##X15262|RET|5979|ret proto-oncogene##AK291807|RET|5979|ret proto-oncogene##Y12528|RET|5979|ret proto-oncogene##BC054876|FXYD4|53828|FXYD domain containing ion transport regulator 4##AY358584|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001184963|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_173160|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##BC106008|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F	0.932727	CTCF.p2:-1:0.933
chr21	39728061	39728172	reg1002555.p1	14.931	+	NM_170737	-83688	+	D87291 NM_170736 AK292812	-99187	+	BC013327 NM_002243	-99453	+	AB489170 AM392572 CU691828 EU446470 AK304662 AK303518 BC040168 AK300395 NM_001136155 NM_182918	142249	-	M21535 NM_001243429	228729	-	TSC_hg19_v1_chr21_-_40032563 AK309469 NM_001243428	304460	-	NM_170737|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##M21535|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243429|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK309469|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243428|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	0.956394	CTCF.p2:16:0.956
chr2	159975222	159975345	reg1002998.p1	14.931	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	-150136	+	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	-323448	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-661700	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	167865	-	AK127551 BC107570 TSC_hg19_v1_chr2_-_160472070	496731	-	BX647250 AL834381 TSC_hg19_v1_chr2_-_160473021 NM_013450 AB040909	497736	-	BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	0.997045	CTCF.p2:0:0.997
chr16	16955451	16955589	reg1002871.p1	14.930	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-628990	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-629032	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-629038	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	609285	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1617871	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1842576	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.962154	CTCF.p2:-11:0.962
chr7	99730376	99730506	reg1002891.p1	14.930	+	BC031288 NM_203397	-6122	+	AK300005 NM_001190415	-12970	-	AY359100 BC032339 NM_152755 AK075537 BC019903 DQ891593 EU176583	-13128	+	TSC_hg19_v1_chr7_+_99746538 NM_001008395 BC105609 BC063401 BC130553 BC130559	16114	+	TSC_hg19_v1_chr7_-_99756309 BC015722 NM_018275 BC094727 AK310170	25858	-	TSC_hg19_v1_chr7_-_99756347 AK054872	25907	-	BC031288|MBLAC1|255374|metallo-beta-lactamase domain containing 1##NM_203397|MBLAC1|255374|metallo-beta-lactamase domain containing 1##AK300005|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa##NM_001190415|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa##AY359100|CNPY4|245812|canopy 4 homolog (zebrafish)##BC032339|CNPY4|245812|canopy 4 homolog (zebrafish)##NM_152755|CNPY4|245812|canopy 4 homolog (zebrafish)##AK075537|CNPY4|245812|canopy 4 homolog (zebrafish)##BC019903|CNPY4|245812|canopy 4 homolog (zebrafish)##DQ891593|CNPY4|245812|canopy 4 homolog (zebrafish)##EU176583|CNPY4|245812|canopy 4 homolog (zebrafish)##NM_001008395|C7orf59|389541|chromosome 7 open reading frame 59##BC105609|C7orf59|389541|chromosome 7 open reading frame 59##BC063401|C7orf59|389541|chromosome 7 open reading frame 59##BC130553|C7orf59|389541|chromosome 7 open reading frame 59##BC130559|C7orf59|389541|chromosome 7 open reading frame 59##BC015722|C7orf43|55262|chromosome 7 open reading frame 43##NM_018275|C7orf43|55262|chromosome 7 open reading frame 43##BC094727|C7orf43|55262|chromosome 7 open reading frame 43##AK310170|C7orf43|55262|chromosome 7 open reading frame 43##AK054872|C7orf43|55262|chromosome 7 open reading frame 43	0.976713	CTCF.p2:-10:0.977
chr15	65023612	65023748	reg1002933.p1	14.929	+	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	-28211	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	-28278	-	BC119629 BC119630 BC148316 BC127630 TSC_hg19_v1_chr15_-_64995360 BC127631 AF242520 AF242521	-28320	-	BC131612 BC148208 AY369207 NM_194272 TSC_hg19_v1_chr15_-_65067789 AK127873	44066	-	BC137503 BC137504 TSC_hg19_v1_chr15_-_65117814 BC018978 AK026345 EU084033 NM_025049 AB185926 AB185927	94155	-	AK311036 NM_001195059 NM_025201 TSC_hg19_v1_chr15_+_65134113 AK096203 BC008744 AF494534	110427	+	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2##BC131612|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC148208|RBPMS2|348093|RNA binding protein with multiple splicing 2##AY369207|RBPMS2|348093|RNA binding protein with multiple splicing 2##NM_194272|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK127873|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC137503|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC137504|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC018978|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AK026345|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##EU084033|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_025049|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185926|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185927|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_001195059|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##NM_025201|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK096203|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC008744|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AF494534|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2	0.982475	CTCF.p2:-18:0.982
chr10	81134453	81134584	reg1003084.p1	14.928	+	TSC_hg19_v1_chr10_+_81107279 AB529152 CU678858 EU831447	-27231	+	BC013204 BC110299 TSC_hg19_v1_chr10_+_81107252	-27269	+	TSC_hg19_v1_chr10_+_81107228 M80254 BC005020	-27286	+	TSC_hg19_v1_chr10_-_81205381 AK308876 AK075279 BC053564 BC039249 BC028617 NM_153367	70742	-	BC070048 NM_001099692	137838	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	185633	-	EU831447|PPIF|10105|peptidylprolyl isomerase F##BC013204|PPIF|10105|peptidylprolyl isomerase F##BC110299|PPIF|10105|peptidylprolyl isomerase F##M80254|PPIF|10105|peptidylprolyl isomerase F##BC005020|PPIF|10105|peptidylprolyl isomerase F##AK308876|ZCCHC24|219654|zinc finger, CCHC domain containing 24##AK075279|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC053564|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC039249|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC028617|ZCCHC24|219654|zinc finger, CCHC domain containing 24##NM_153367|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2	1.060948	CTCF.p2:-8:1.000
chr11	120043073	120043190	reg1002009.p1	14.928	+	TSC_hg19_v1_chr11_-_120008858 AF230388 AF230389 L24203 NM_012101	-34276	-	BC017352 BC010644 TSC_hg19_v1_chr11_-_120008822 AK223090 AK122720	-34319	-	AB464321 CU675956 EU446943 TSC_hg19_v1_chr11_-_120008772	-34376	-	TSC_hg19_v1_chr11_+_120081739 BC047726 NM_178507 BC008339	38582	+	AK302212 NM_001244682	64217	+	AK291993 NM_014352 AF162278 BC101649 BC143593 BC143594 BC143595 AF133895 AJ012214 EU446698	67846	+	AF230388|TRIM29|23650|tripartite motif containing 29##AF230389|TRIM29|23650|tripartite motif containing 29##L24203|TRIM29|23650|tripartite motif containing 29##NM_012101|TRIM29|23650|tripartite motif containing 29##BC017352|TRIM29|23650|tripartite motif containing 29##BC010644|TRIM29|23650|tripartite motif containing 29##AK223090|TRIM29|23650|tripartite motif containing 29##AK122720|TRIM29|23650|tripartite motif containing 29##EU446943|TRIM29|23650|tripartite motif containing 29##BC047726|OAF|220323|OAF homolog (Drosophila)##NM_178507|OAF|220323|OAF homolog (Drosophila)##BC008339|OAF|220323|OAF homolog (Drosophila)##AK302212|POU2F3|25833|POU class 2 homeobox 3##NM_001244682|POU2F3|25833|POU class 2 homeobox 3##AK291993|POU2F3|25833|POU class 2 homeobox 3##NM_014352|POU2F3|25833|POU class 2 homeobox 3##AF162278|POU2F3|25833|POU class 2 homeobox 3##BC101649|POU2F3|25833|POU class 2 homeobox 3##BC143593|POU2F3|25833|POU class 2 homeobox 3##BC143594|POU2F3|25833|POU class 2 homeobox 3##BC143595|POU2F3|25833|POU class 2 homeobox 3##AF133895|POU2F3|25833|POU class 2 homeobox 3##AJ012214|POU2F3|25833|POU class 2 homeobox 3##EU446698|POU2F3|25833|POU class 2 homeobox 3	0.0	
chr19	48794612	48794733	reg1001766.p2	14.928	+	AK075062 NM_153608	-20019	+	TSC_hg19_v1_chr19_-_48759141 BC056891 BC034564 BC046136 NM_001184902 NM_001184904	-35501	-	AK125548 TSC_hg19_v1_chr19_+_48758936 BC060888 BC008448 BC033836	-35723	+	BC007730 NM_144577	28659	-	TSC_hg19_v1_chr19_-_48825152 AK128144	30498	-	TSC_hg19_v1_chr19_+_48828629 NM_001425 U87947	33968	+	AK075062|ZNF114|163071|zinc finger protein 114##NM_153608|ZNF114|163071|zinc finger protein 114##BC056891|CARD8|22900|caspase recruitment domain family, member 8##BC034564|CARD8|22900|caspase recruitment domain family, member 8##BC046136|CARD8|22900|caspase recruitment domain family, member 8##NM_001184902|CARD8|22900|caspase recruitment domain family, member 8##NM_001184904|CARD8|22900|caspase recruitment domain family, member 8##AK125548|LOC100505812|100505812|uncharacterized LOC100505812##BC060888|LOC100505812|100505812|uncharacterized LOC100505812##BC007730|CCDC114|93233|coiled-coil domain containing 114##NM_144577|CCDC114|93233|coiled-coil domain containing 114##AK128144|CCDC114|93233|coiled-coil domain containing 114##NM_001425|EMP3|2014|epithelial membrane protein 3##U87947|EMP3|2014|epithelial membrane protein 3	0.967359	CTCF.p2:9:0.967
chr2	47550349	47550472	reg1002272.p1	14.928	+	TSC_hg19_v1_chr2_-_47403685 NM_001743	-146701	-	TSC_hg19_v1_chr2_-_47403656 BC008437	-146756	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	-146760	-	NM_002354 TSC_hg19_v1_chr2_+_47596376	45932	+	TSC_hg19_v1_chr2_+_47596449 AK026585 BC014785 M26481 M32325 X14758 M33011 M32306 DQ891338 DQ894520 CR542259 CR542283	46135	+	TSC_hg19_v1_chr2_+_47630218 AK304496	79794	+	NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC008437|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##NM_002354|EPCAM|4072|epithelial cell adhesion molecule##AK026585|EPCAM|4072|epithelial cell adhesion molecule##BC014785|EPCAM|4072|epithelial cell adhesion molecule##M26481|EPCAM|4072|epithelial cell adhesion molecule##M32325|EPCAM|4072|epithelial cell adhesion molecule##X14758|EPCAM|4072|epithelial cell adhesion molecule##M33011|EPCAM|4072|epithelial cell adhesion molecule##M32306|EPCAM|4072|epithelial cell adhesion molecule##DQ891338|EPCAM|4072|epithelial cell adhesion molecule##DQ894520|EPCAM|4072|epithelial cell adhesion molecule##CR542259|EPCAM|4072|epithelial cell adhesion molecule##CR542283|EPCAM|4072|epithelial cell adhesion molecule##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.07655	
chr8	28181933	28182047	reg1001951.p1	14.928	+	NM_006228 U48263 TSC_hg19_v1_chr8_+_28174784 AK289633 AY335948 BC034758	-7265	+	NM_018091 TSC_hg19_v1_chr8_+_27950679 AK302140 AK296475 AK022626 AK295574 AK001284 AK293424 AK315985 AK316053 AK298265 BC001240 AL834273 AB463602 AM392633	-231333	+	AB075870 NM_001010906	-240603	-	BC001237 TSC_hg19_v1_chr8_-_28243694	61652	-	AK002050 AK023418 NM_018660 AB057659 AB073627	61971	-	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	165789	-	NM_006228|PNOC|5368|prepronociceptin##U48263|PNOC|5368|prepronociceptin##AK289633|PNOC|5368|prepronociceptin##AY335948|PNOC|5368|prepronociceptin##BC034758|PNOC|5368|prepronociceptin##NM_018091|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK302140|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK296475|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK022626|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK295574|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK001284|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK293424|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK315985|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK316053|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK298265|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##BC001240|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AL834273|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AM392633|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AB075870|C8orf80|389643|chromosome 8 open reading frame 80##NM_001010906|C8orf80|389643|chromosome 8 open reading frame 80##BC001237|ZNF395|55893|zinc finger protein 395##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16	0.919541	CTCF.p2:18:0.908
chr12	53681614	53681739	reg1002641.p1	14.927	+	TSC_hg19_v1_chr12_+_53662054 NM_012291 D79987	-19597	+	TSC_hg19_v1_chr12_+_53646007 AK225998	-35680	+	TSC_hg19_v1_chr12_+_53645948 AY358604 BC067795 BX640649	-35733	+	NM_002624 NM_145897 TSC_hg19_v1_chr12_+_53689331 BC003373 AB055803 AB055804 AB055805 AK024094 AK292623 BC062671	7612	+	AB527693 CU687580 BT007195 TSC_hg19_v1_chr12_+_53689361	7680	+	TSC_hg19_v1_chr12_+_53693478 NM_021640 AF289485 BC051871 AK293449 CU690878 BC013956	11817	+	NM_012291|ESPL1|9700|extra spindle pole bodies homolog 1 (S. cerevisiae)##D79987|ESPL1|9700|extra spindle pole bodies homolog 1 (S. cerevisiae)##AK225998|MFSD5|84975|major facilitator superfamily domain containing 5##AY358604|MFSD5|84975|major facilitator superfamily domain containing 5##BC067795|MFSD5|84975|major facilitator superfamily domain containing 5##BX640649|MFSD5|84975|major facilitator superfamily domain containing 5##NM_002624|PFDN5|5204|prefoldin subunit 5##NM_145897|PFDN5|5204|prefoldin subunit 5##BC003373|PFDN5|5204|prefoldin subunit 5##AB055803|PFDN5|5204|prefoldin subunit 5##AB055804|PFDN5|5204|prefoldin subunit 5##AB055805|PFDN5|5204|prefoldin subunit 5##AK024094|PFDN5|5204|prefoldin subunit 5##AK292623|PFDN5|5204|prefoldin subunit 5##BC062671|PFDN5|5204|prefoldin subunit 5##BT007195|PFDN5|5204|prefoldin subunit 5##NM_021640|C12orf10|60314|chromosome 12 open reading frame 10##AF289485|C12orf10|60314|chromosome 12 open reading frame 10##BC051871|C12orf10|60314|chromosome 12 open reading frame 10##AK293449|C12orf10|60314|chromosome 12 open reading frame 10##BC013956|C12orf10|60314|chromosome 12 open reading frame 10	0.395655	CTCF.p2:14:0.396
chr1	201528914	201529024	reg1002698.p1	14.924	+	TSC_hg19_v1_chr1_+_201476345 AK097932	-52608	+	TSC_hg19_v1_chr1_-_201476252 AK057876 AK122812 AK302237 AK304415 NM_001193570 NM_004078	-52652	-	BC018806 TSC_hg19_v1_chr1_-_201476245	-52726	-	AY043013 NM_020443 TSC_hg19_v1_chr1_+_201617460	88486	+	TSC_hg19_v1_chr1_+_201617793 BC117683 AJ488101	88759	+	TSC_hg19_v1_chr1_+_201708656 AK056158	179683	+	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1##AK122812|CSRP1|1465|cysteine and glycine-rich protein 1##AK302237|CSRP1|1465|cysteine and glycine-rich protein 1##AK304415|CSRP1|1465|cysteine and glycine-rich protein 1##NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1##NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1##BC018806|CSRP1|1465|cysteine and glycine-rich protein 1##AY043013|NAV1|89796|neuron navigator 1##NM_020443|NAV1|89796|neuron navigator 1##BC117683|NAV1|89796|neuron navigator 1##AJ488101|NAV1|89796|neuron navigator 1##AK056158|NAV1|89796|neuron navigator 1	0.984633	CTCF.p2:-7:0.985
chr4	182064543	182064667	reg1002922.p1	14.923	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-3700962	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-3701012	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-3701064	-	TSC_hg19_v1_chr4_+_183065111 AK308489	1000520	+	NM_001080477 HE578284 HE578285	1180549	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	1773925	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.99917	CTCF.p2:-3:0.999
chr1	36034655	36034780	reg1002362.p1	14.922	+	TSC_hg19_v1_chr1_+_36023399 NM_001014839 NM_001014841 NM_014284 AB018739 AB018740 BC024592 AB011179	-11290	+	TSC_hg19_v1_chr1_-_36023005 NM_024874	-11686	-	AK316252 TSC_hg19_v1_chr1_-_36023002	-11714	-	AY326454 BC041175 NM_178548	4253	+	AK310023 NM_001199780	62420	-	BT007137 CR456862 AB464087 DQ893539 DQ896799 TSC_hg19_v1_chr1_-_36107121 D26599 BC101836 BC105126 BC107901 BC000268 AK296956 AB209470	72366	-	NM_001014839|NCDN|23154|neurochondrin##NM_001014841|NCDN|23154|neurochondrin##NM_014284|NCDN|23154|neurochondrin##AB018739|NCDN|23154|neurochondrin##AB018740|NCDN|23154|neurochondrin##BC024592|NCDN|23154|neurochondrin##AB011179|NCDN|23154|neurochondrin##NM_024874|KIAA0319L|79932|KIAA0319-like##AK316252|KIAA0319L|79932|KIAA0319-like##AY326454|TFAP2E|339488|transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)##BC041175|TFAP2E|339488|transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)##NM_178548|TFAP2E|339488|transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)##AK310023|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##NM_001199780|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BT007137|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##CR456862|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##DQ893539|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##DQ896799|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##D26599|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC101836|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC105126|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC107901|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC000268|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##AK296956|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##AB209470|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2	0.840635	CTCF.p2:-3:0.841
chr8	20089394	20089522	reg1002358.p1	14.921	+	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	-34536	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	-34565	+	NM_001693 TSC_hg19_v1_chr8_+_20054882	-34666	+	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	23288	-	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	1556334	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	1556908	-	X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##NM_001693|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2	0.392975	CTCF.p2:-5:0.393
chr12	64943495	64943628	reg1003040.p1	14.920	+	NM_013254 TSC_hg19_v1_chr12_+_64845917 AK291039 BC034950 AF191838	-97668	+	BC020569 Y16414 TSC_hg19_v1_chr12_+_64803772 AF039022	-139783	+	TSC_hg19_v1_chr12_+_64798240 NM_007235 AK308108 AK292884	-145315	+	TSC_hg19_v1_chr12_+_65004274 AY217662 AY217663 BC100949 BC100950 BC100951 BC100952 NM_178169	60700	+	CU680338 Z12173 TSC_hg19_v1_chr12_-_65153140	209536	-	TSC_hg19_v1_chr12_-_65153163 AK308454 AK291771	209598	-	NM_013254|TBK1|29110|TANK-binding kinase 1##AK291039|TBK1|29110|TANK-binding kinase 1##BC034950|TBK1|29110|TANK-binding kinase 1##AF191838|TBK1|29110|TANK-binding kinase 1##BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##NM_007235|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK308108|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK292884|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AY217662|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##AY217663|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100949|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100950|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100951|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100952|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##NM_178169|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##Z12173|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK308454|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK291771|GNS|2799|glucosamine (N-acetyl)-6-sulfatase	0.979613	CTCF.p2:-12:0.980
chr1	235677190	235677324	reg1003762.p1	14.918	+	BC029564 NM_152490 TSC_hg19_v1_chr1_-_235667782	-9476	-	TSC_hg19_v1_chr1_-_235667723 BC016974 AK130297	-9524	-	TSC_hg19_v1_chr1_-_235667473 AK091497	-9748	-	TSC_hg19_v1_chr1_-_235813301 AK311781 NM_001098722	135925	-	BC022485 NM_001098721 NM_004485	136796	-	TSC_hg19_v1_chr1_-_236030193 BC020793	352926	-	BC029564|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_152490|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##BC016974|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##AK130297|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##AK091497|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##AK311781|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098722|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	0.92066	CTCF.p2:0:0.921
chr12	6862868	6863012	reg1003120.p1	14.917	+	TSC_hg19_v1_chr12_-_6862261 BC000898 U57342 BC002340 AF070539	-715	-	AK289869 NM_005439 TSC_hg19_v1_chr12_-_6862130	-835	-	TSC_hg19_v1_chr12_+_6833448 NM_001164093 AK292621	-29487	+	TSC_hg19_v1_chr12_+_6875528 NM_002824	12580	+	TSC_hg19_v1_chr12_+_6875614 M24398	12655	+	TSC_hg19_v1_chr12_+_6875713 BC128229 BC017025 AB463999	12837	+	BC000898|MLF2|8079|myeloid leukemia factor 2##U57342|MLF2|8079|myeloid leukemia factor 2##BC002340|MLF2|8079|myeloid leukemia factor 2##AF070539|MLF2|8079|myeloid leukemia factor 2##AK289869|MLF2|8079|myeloid leukemia factor 2##NM_005439|MLF2|8079|myeloid leukemia factor 2##NM_001164093|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##AK292621|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##NM_002824|PTMS|5763|parathymosin##M24398|PTMS|5763|parathymosin##BC128229|PTMS|5763|parathymosin##BC017025|PTMS|5763|parathymosin	0.998716	CTCF.p2:1:0.999
chr7	127087536	127087673	reg1002984.p1	14.916	+	TSC_hg19_v1_chr7_-_127032759 AF218032 NM_176814 AK309674 BC047641	-54846	-	TSC_hg19_v1_chr7_-_126893165 AK290197	-194452	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	-195239	-	AF525417 AK315472 BC078665 TSC_hg19_v1_chr7_-_127225651	137935	-	BC014100 NM_024523 TSC_hg19_v1_chr7_-_127225654	138068	-	NM_001662 TSC_hg19_v1_chr7_+_127228469 AK307297 AK308548 BC033104 M57567 AK297026 AK312107 BC003043 AB528679 AF493884 BT007087	140874	+	AF218032|ZNF800|168850|zinc finger protein 800##NM_176814|ZNF800|168850|zinc finger protein 800##AK309674|ZNF800|168850|zinc finger protein 800##BC047641|ZNF800|168850|zinc finger protein 800##AK290197|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##AF525417|GCC1|79571|GRIP and coiled-coil domain containing 1##AK315472|GCC1|79571|GRIP and coiled-coil domain containing 1##BC078665|GCC1|79571|GRIP and coiled-coil domain containing 1##BC014100|GCC1|79571|GRIP and coiled-coil domain containing 1##NM_024523|GCC1|79571|GRIP and coiled-coil domain containing 1##NM_001662|ARF5|381|ADP-ribosylation factor 5##AK307297|ARF5|381|ADP-ribosylation factor 5##AK308548|ARF5|381|ADP-ribosylation factor 5##BC033104|ARF5|381|ADP-ribosylation factor 5##M57567|ARF5|381|ADP-ribosylation factor 5##AK297026|ARF5|381|ADP-ribosylation factor 5##AK312107|ARF5|381|ADP-ribosylation factor 5##BC003043|ARF5|381|ADP-ribosylation factor 5##AF493884|ARF5|381|ADP-ribosylation factor 5##BT007087|ARF5|381|ADP-ribosylation factor 5	1.075355	CTCF.p2:41:0.979
chr7	134198061	134198175	reg1001904.p1	14.916	+	TSC_hg19_v1_chr7_-_134143878 AK313439 BC000260 NM_001628 AK311339	-54154	-	TSC_hg19_v1_chr7_-_134143853 AB209796 BT019859 CR450351 CR542203 CU675153 J04795 DQ890758 DQ892546 DQ893921 DQ895757 M34720 AF328729 J05474 J05017 BC010391 BC005387 X15414	-54285	-	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	-196331	-	AF524864 NM_020299 BC008837	14252	+	NM_001080538	35730	+	NM_001724 NM_199186 TSC_hg19_v1_chr7_+_134331586 BC017050 AK315439 AK097778 X04327	133467	+	AK313439|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC000260|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001628|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK311339|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AB209796|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BT019859|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR450351|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR542203|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J04795|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ890758|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ892546|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ893921|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ895757|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##M34720|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF328729|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05474|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05017|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC010391|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC005387|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##X15414|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_001080538|AKR1B15|441282|aldo-keto reductase family 1, member B15##NM_001724|BPGM|669|2,3-bisphosphoglycerate mutase##NM_199186|BPGM|669|2,3-bisphosphoglycerate mutase##BC017050|BPGM|669|2,3-bisphosphoglycerate mutase##AK315439|BPGM|669|2,3-bisphosphoglycerate mutase##AK097778|BPGM|669|2,3-bisphosphoglycerate mutase##X04327|BPGM|669|2,3-bisphosphoglycerate mutase	0.997042	CTCF.p2:7:0.997
chr7	2508669	2508795	reg1002396.p2	14.916	+	TSC_hg19_v1_chr7_+_2443245 BC095492 BC002918 BC015954 AK223191 AK223211 AK313484 AF239822 AY358574	-65489	+	TSC_hg19_v1_chr7_+_2443191 NM_001243794 NM_001243795 NM_018641	-65552	+	TSC_hg19_v1_chr7_+_2394547 BC110865	-114185	+	AK096284 NM_001166355	43430	+	BC014851 NM_002304	48764	+	TSC_hg19_v1_chr7_+_2559407 NM_001040167 NM_001040168	50705	+	BC095492|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC002918|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC015954|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK223191|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK223211|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK313484|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AF239822|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AY358574|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_001243794|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_001243795|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_018641|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC110865|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##AK096284|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166355|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC014851|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002304|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001040167|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001040168|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	1.056505	CTCF.p2:1:1.000
chr21	40105940	40106090	reg1002211.p1	14.914	+	AY204740 AY204741 AY204742 AY204743 NM_001243432 TSC_hg19_v1_chr21_-_40033677 AK297807 NM_001136154 NM_004449	-72355	-	TSC_hg19_v1_chr21_-_40032563 AK309469 NM_001243428	-73439	-	M21535 NM_001243429	-149170	-	J04102 TSC_hg19_v1_chr21_+_40177830	71782	+	TSC_hg19_v1_chr21_+_40177852 NM_005239 BC042954 AK315563 BC017040	71862	+	CU678538 AB451468 AF417108 AY463963 CR541821 CR541852 DQ892311 DQ895511 TSC_hg19_v1_chr21_-_40555337	449307	-	AY204740|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204741|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204742|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204743|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243432|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK297807|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136154|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_004449|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK309469|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243428|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##M21535|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243429|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##J04102|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AB451468|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AF417108|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AY463963|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541821|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541852|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ892311|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ895511|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1	0.23735	CTCF.p2:-15:0.237
chr5	79154070	79154197	reg1003308.p1	14.914	+	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-168461	+	AK095818 TSC_hg19_v1_chr5_+_78908395	-245712	+	TSC_hg19_v1_chr5_+_78908296 BC026061	-245818	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	132825	-	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	177031	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	397752	-	BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##AK095818|PAPD4|167153|PAP associated domain containing 4##BC026061|PAPD4|167153|PAP associated domain containing 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5	0.999794	CTCF.p2:4:1.000
chr5	163931289	163931408	reg1002806.p1	14.913	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-998705	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-1001060	+	NM_001142556 NM_001142557 NM_012484 NM_012485 BC057235 AK313603 BC030505 TSC_hg19_v1_chr5_+_162887665 AK302975 BC006984 AK303616 BC070281 BC017793 U29343 AF032862 BC108904 BC108905 BC107869 AK290577	-1043753	+	HE578282 HE578283 NM_001122679	2780494	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	3787473	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	3982126	+	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001142556|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001142557|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012484|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012485|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC057235|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK313603|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC030505|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK302975|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK303616|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC070281|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC017793|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##U29343|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AF032862|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108904|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108905|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC107869|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK290577|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.814468	CTCF.p2:11:0.814
chr14	72983717	72983854	reg1003093.p1	14.911	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-583919	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-584632	+	AK294895 NM_001204423	-584969	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	377023	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	409350	+	AK098542 AF311602 NM_178441	469872	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.0	
chr20	47749576	47749710	reg1003897.p1	14.911	+	TSC_hg19_v1_chr20_+_47662875 AF053640	-86755	+	TSC_hg19_v1_chr20_+_47662853 BC108309 NM_001316 AF053641 U33286 AK312306 AK307965 AK297270 AK297314 AK298477 AK300589 BC109313 BC109314	-86817	+	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	-211325	+	TSC_hg19_v1_chr20_-_47804876 AK292859 BC001893 BC010169 AY529074 AK291487 BC007532 AK057739 AK025519 BC095397 AL136601	55143	-	AF061938 AF061939 AF061940 AF061941 AY546099 NM_001037328 NM_004602 NM_017452 NM_017453 NM_017454 TSC_hg19_v1_chr20_-_47804905	55270	-	NM_017895 BC126287 BC130275 BC144125 BC104480 HQ258508 AY044431 AL832131 EU718675 TSC_hg19_v1_chr20_+_47835952 AK300135	86249	+	AF053640|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC108309|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##NM_001316|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053641|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##U33286|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK312306|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK307965|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297270|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK298477|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK300589|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109313|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AK292859|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC001893|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC010169|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AY529074|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK291487|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC007532|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK057739|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK025519|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC095397|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AL136601|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061938|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061939|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061940|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061941|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AY546099|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_001037328|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_004602|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017452|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017453|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017454|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017895|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC126287|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC130275|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC144125|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC104480|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##HQ258508|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AY044431|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AL832131|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##EU718675|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AK300135|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	0.993115	CTCF.p2:-7:0.993
chr9	104292523	104292644	reg1002859.p1	14.911	+	TSC_hg19_v1_chr9_-_104249468 AK313981 BC006115 NM_032342	-43136	-	X01098 TSC_hg19_v1_chr9_-_104198057 AK026411 AK290795 BC029399 NM_000035 X02747	-94509	-	TSC_hg19_v1_chr9_+_104161232 AK290163 AK313655 AK308935 NM_003452 NM_197977 BC065718 BC092425 AF025770 U75454 U95992 BC126120 BC143876 BC143877	-131339	+	TSC_hg19_v1_chr9_+_104296134 AF265230 NM_019592 AK022532 BC110584 BC110585 BC152309	3547	+	TSC_hg19_v1_chr9_+_104296143 BC016691 BC063115	3564	+	TSC_hg19_v1_chr9_+_104296175 AK314401	3587	+	AK313981|C9orf125|84302|chromosome 9 open reading frame 125##BC006115|C9orf125|84302|chromosome 9 open reading frame 125##NM_032342|C9orf125|84302|chromosome 9 open reading frame 125##X01098|ALDOB|229|aldolase B, fructose-bisphosphate##AK026411|ALDOB|229|aldolase B, fructose-bisphosphate##AK290795|ALDOB|229|aldolase B, fructose-bisphosphate##BC029399|ALDOB|229|aldolase B, fructose-bisphosphate##NM_000035|ALDOB|229|aldolase B, fructose-bisphosphate##X02747|ALDOB|229|aldolase B, fructose-bisphosphate##AK290163|ZNF189|7743|zinc finger protein 189##AK313655|ZNF189|7743|zinc finger protein 189##AK308935|ZNF189|7743|zinc finger protein 189##NM_003452|ZNF189|7743|zinc finger protein 189##NM_197977|ZNF189|7743|zinc finger protein 189##BC065718|ZNF189|7743|zinc finger protein 189##BC092425|ZNF189|7743|zinc finger protein 189##AF025770|ZNF189|7743|zinc finger protein 189##U75454|ZNF189|7743|zinc finger protein 189##U95992|ZNF189|7743|zinc finger protein 189##BC126120|ZNF189|7743|zinc finger protein 189##BC143876|ZNF189|7743|zinc finger protein 189##BC143877|ZNF189|7743|zinc finger protein 189##AF265230|RNF20|56254|ring finger protein 20##NM_019592|RNF20|56254|ring finger protein 20##AK022532|RNF20|56254|ring finger protein 20##BC110584|RNF20|56254|ring finger protein 20##BC110585|RNF20|56254|ring finger protein 20##BC152309|RNF20|56254|ring finger protein 20##BC016691|RNF20|56254|ring finger protein 20##BC063115|RNF20|56254|ring finger protein 20##AK314401|RNF20|56254|ring finger protein 20	0.967847	CTCF.p2:-1:0.968
chr10	101805918	101806033	reg1002155.p2	14.910	+	TSC_hg19_v1_chr10_-_101769671 AL833283 NM_015221	-36314	-	BC020878 TSC_hg19_v1_chr10_-_101690657 AK128576	-115272	-	TSC_hg19_v1_chr10_+_101542570 X96395 BC136419 U63970	-263412	+	X14329 BC027897 NM_001308 AK313972	35650	-	TSC_hg19_v1_chr10_-_101945727 NM_006459 AK222480 AK298427 AK315580	139761	-	TSC_hg19_v1_chr10_-_101945787 AF064093 NM_001100626	139827	-	AL833283|DNMBP|23268|dynamin binding protein##NM_015221|DNMBP|23268|dynamin binding protein##AK128576|DNMBP|23268|dynamin binding protein##X96395|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##BC136419|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U63970|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##X14329|CPN1|1369|carboxypeptidase N, polypeptide 1##BC027897|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_001308|CPN1|1369|carboxypeptidase N, polypeptide 1##AK313972|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_006459|ERLIN1|10613|ER lipid raft associated 1##AK222480|ERLIN1|10613|ER lipid raft associated 1##AK298427|ERLIN1|10613|ER lipid raft associated 1##AK315580|ERLIN1|10613|ER lipid raft associated 1##AF064093|ERLIN1|10613|ER lipid raft associated 1##NM_001100626|ERLIN1|10613|ER lipid raft associated 1	0.99976	CTCF.p2:0:1.000
chr1	13992304	13992427	reg1001894.p1	14.908	+	NM_001006624 NM_001006625	-80399	+	NM_006474 NM_198389 BC014668 BC022812 TSC_hg19_v1_chr1_+_13910326 AY194238 AK075327 AK075345 AK312607 AF390106 AF030428 AJ225022 AB127958	-81976	+	BC016048 NM_001010847	-152166	-	TSC_hg19_v1_chr1_+_14026688 BC014468 NM_001135610	34359	+	NM_012231 NM_015866 U17838	38984	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	83520	+	NM_001006624|PDPN|10630|podoplanin##NM_001006625|PDPN|10630|podoplanin##NM_006474|PDPN|10630|podoplanin##NM_198389|PDPN|10630|podoplanin##BC014668|PDPN|10630|podoplanin##BC022812|PDPN|10630|podoplanin##AY194238|PDPN|10630|podoplanin##AK075327|PDPN|10630|podoplanin##AK075345|PDPN|10630|podoplanin##AK312607|PDPN|10630|podoplanin##AF390106|PDPN|10630|podoplanin##AF030428|PDPN|10630|podoplanin##AJ225022|PDPN|10630|podoplanin##AB127958|PDPN|10630|podoplanin##BC016048|LRRC38|126755|leucine rich repeat containing 38##NM_001010847|LRRC38|126755|leucine rich repeat containing 38##BC014468|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001135610|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_012231|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_015866|PRDM2|7799|PR domain containing 2, with ZNF domain##U17838|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain	0.776027	CTCF.p2:-18:0.776
chr21	37703330	37703462	reg1003054.p1	14.907	+	TSC_hg19_v1_chr21_+_37692548 BC058002 NM_015358 AK295133 BC007311 D50926 BC094779 BC132731 BC144116 AK292957 AB489143	-10877	+	AJ237839 NM_005128	-166558	+	TSC_hg19_v1_chr21_-_37528616 AB004851 BC037580 BC047014	-174765	-	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	54294	+	BC012126 NM_012130 AY355349	135335	-	AF314090 AY355348 NM_001146079 NM_144492	148991	-	BC058002|MORC3|23515|MORC family CW-type zinc finger 3##NM_015358|MORC3|23515|MORC family CW-type zinc finger 3##AK295133|MORC3|23515|MORC family CW-type zinc finger 3##BC007311|MORC3|23515|MORC family CW-type zinc finger 3##D50926|MORC3|23515|MORC family CW-type zinc finger 3##BC094779|MORC3|23515|MORC family CW-type zinc finger 3##BC132731|MORC3|23515|MORC family CW-type zinc finger 3##BC144116|MORC3|23515|MORC family CW-type zinc finger 3##AK292957|MORC3|23515|MORC family CW-type zinc finger 3##AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2##AB004851|LOC100506428|100506428|uncharacterized LOC100506428##BC037580|LOC100506428|100506428|uncharacterized LOC100506428##BC047014|LOC100506428|100506428|uncharacterized LOC100506428##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14##AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14	0.906199	CTCF.p2:9:0.906
chr17	27053980	27054115	reg1002271.p1	14.906	+	NM_001160407	-99	-	EU831756 EU831834 TSC_hg19_v1_chr17_-_27053250 BC014072 NM_138463	-859	-	TSC_hg19_v1_chr17_+_27047009 NM_000984 U43701 AK130965 AK312123 BC058041 U37230 BC014459 U02032	-7039	+	BC112240 BC113705 AK301429 AY242354 AY267371 HQ258347 NM_178170	1767	+	TSC_hg19_v1_chr17_+_27071025 NM_004295 BC001769 X80200 AK300804 AY937222 AY937223 AY937224 AY937225 AB529167 DQ892825 DQ896071 CU674876 AF082185	17022	+	TSC_hg19_v1_chr17_-_27139467 AK095569	85400	-	NM_001160407|TLCD1|116238|TLC domain containing 1##EU831756|TLCD1|116238|TLC domain containing 1##EU831834|TLCD1|116238|TLC domain containing 1##BC014072|TLCD1|116238|TLC domain containing 1##NM_138463|TLCD1|116238|TLC domain containing 1##NM_000984|RPL23A|6147|ribosomal protein L23a##U43701|RPL23A|6147|ribosomal protein L23a##AK130965|RPL23A|6147|ribosomal protein L23a##AK312123|RPL23A|6147|ribosomal protein L23a##BC058041|RPL23A|6147|ribosomal protein L23a##U37230|RPL23A|6147|ribosomal protein L23a##BC014459|RPL23A|6147|ribosomal protein L23a##U02032|RPL23A|6147|ribosomal protein L23a##BC112240|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##BC113705|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AK301429|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY242354|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY267371|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##HQ258347|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_178170|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_004295|TRAF4|9618|TNF receptor-associated factor 4##BC001769|TRAF4|9618|TNF receptor-associated factor 4##X80200|TRAF4|9618|TNF receptor-associated factor 4##AK300804|TRAF4|9618|TNF receptor-associated factor 4##AY937222|TRAF4|9618|TNF receptor-associated factor 4##AY937223|TRAF4|9618|TNF receptor-associated factor 4##AY937224|TRAF4|9618|TNF receptor-associated factor 4##DQ892825|TRAF4|9618|TNF receptor-associated factor 4##DQ896071|TRAF4|9618|TNF receptor-associated factor 4##AF082185|TRAF4|9618|TNF receptor-associated factor 4##AK095569|C17orf63|55731|chromosome 17 open reading frame 63	0.968238	CTCF.p2:-29:0.968
chr5	146345708	146345855	reg1003547.p1	14.906	+	AK314810 M64930 NM_004576 AK056192 NM_181675 AK289717 BX647887 NM_001127381	-87482	-	CU689232 DQ891785 DQ894969 TSC_hg19_v1_chr5_-_146257712	-88107	-	AB463658 AY351676 NM_194251 AK122627	-450068	-	BC031790 NM_181674 NM_181676	89863	-	AK294659 NM_181677 NM_181678 AK295347	115241	-	AK094580 NM_001112724 NM_145001 TSC_hg19_v1_chr5_+_146614587 AK315942 BC021666 AK299099	268825	+	AK314810|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##M64930|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_004576|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK056192|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181675|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK289717|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BX647887|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_001127381|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##DQ891785|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##DQ894969|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AY351676|GPR151|134391|G protein-coupled receptor 151##NM_194251|GPR151|134391|G protein-coupled receptor 151##BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK094580|STK32A|202374|serine/threonine kinase 32A##NM_001112724|STK32A|202374|serine/threonine kinase 32A##NM_145001|STK32A|202374|serine/threonine kinase 32A##AK315942|STK32A|202374|serine/threonine kinase 32A##BC021666|STK32A|202374|serine/threonine kinase 32A##AK299099|STK32A|202374|serine/threonine kinase 32A	0.99809	CTCF.p2:20:0.998
chr19	8461686	8461798	reg1002761.p1	14.904	+	TSC_hg19_v1_chr19_-_8455589 BC014506	-6170	-	TSC_hg19_v1_chr19_+_8455285 AK297498 AK225642 AK225036 D38516 X79780 BC110081 AB590872 AF498947 BT019535 BT019536 CR536494 CR541691 GQ129215 GQ129216	-6460	+	TSC_hg19_v1_chr19_+_8455246 AK312994	-6491	+	TSC_hg19_v1_chr19_+_8478188 NM_001005415 NM_001005416 NM_016496 AF151074	16486	+	TSC_hg19_v1_chr19_+_8509599 AF061832	47880	+	NM_005968 NM_031203 TSC_hg19_v1_chr19_+_8509858 BC000138 AK293612	48088	+	BC014506|LOC100507567|100507567|uncharacterized LOC100507567##AK297498|RAB11B|9230|RAB11B, member RAS oncogene family##AK225642|RAB11B|9230|RAB11B, member RAS oncogene family##AK225036|RAB11B|9230|RAB11B, member RAS oncogene family##D38516|RAB11B|9230|RAB11B, member RAS oncogene family##X79780|RAB11B|9230|RAB11B, member RAS oncogene family##BC110081|RAB11B|9230|RAB11B, member RAS oncogene family##AF498947|RAB11B|9230|RAB11B, member RAS oncogene family##BT019535|RAB11B|9230|RAB11B, member RAS oncogene family##BT019536|RAB11B|9230|RAB11B, member RAS oncogene family##CR536494|RAB11B|9230|RAB11B, member RAS oncogene family##CR541691|RAB11B|9230|RAB11B, member RAS oncogene family##GQ129215|RAB11B|9230|RAB11B, member RAS oncogene family##GQ129216|RAB11B|9230|RAB11B, member RAS oncogene family##AK312994|RAB11B|9230|RAB11B, member RAS oncogene family##NM_001005415|MARCH2|51257|membrane-associated ring finger (C3HC4) 2##NM_001005416|MARCH2|51257|membrane-associated ring finger (C3HC4) 2##NM_016496|MARCH2|51257|membrane-associated ring finger (C3HC4) 2##AF151074|MARCH2|51257|membrane-associated ring finger (C3HC4) 2##AF061832|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M##NM_005968|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M##NM_031203|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M##BC000138|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M	0.774076	CTCF.p2:-3:0.774
chr8	70854704	70854857	reg1003125.p1	14.903	+	AK308488 AF205075 AK096879 NM_030958	-107531	-	AK022760 NM_001146008	-109156	-	BC137424 BC144618 NM_001146009	-109377	-	TSC_hg19_v1_chr8_-_70983468 BC052311	128691	-	TSC_hg19_v1_chr8_-_70983549 AF319458 AK022595 NM_024504	128775	-	BC092442 TSC_hg19_v1_chr8_-_71315599	460767	-	AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC052311|PRDM14|63978|PR domain containing 14##AF319458|PRDM14|63978|PR domain containing 14##AK022595|PRDM14|63978|PR domain containing 14##NM_024504|PRDM14|63978|PR domain containing 14##BC092442|NCOA2|10499|nuclear receptor coactivator 2	0.999594	CTCF.p2:-18:1.000
chr1	40385297	40385427	reg1002684.p1	14.902	+	TSC_hg19_v1_chr1_-_40367563 AK296078 AB527750 BC030694 BC011864 NM_001033081 NM_001033082 NM_005376	-17750	-	TSC_hg19_v1_chr1_-_40349179 AK223478 AK304759 AY303390 BC128155 BC128156 NM_017646 BC107569	-36188	-	AK296453 AK307910 TSC_hg19_v1_chr1_-_40349167	-36195	-	TSC_hg19_v1_chr1_+_40420783 NM_001136493 NM_032793	35423	+	TSC_hg19_v1_chr1_+_40420821 BC011587 AK075183 AK301533 AB073383 AK027396 AK297991 AK093223 AK291540 AX747998 AF289609 AL834184	35456	+	TSC_hg19_v1_chr1_+_40420841 BC092414 BC069694 BC069771 AK074186 CU679972	35538	+	AK296078|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##BC030694|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##BC011864|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##NM_001033081|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##NM_001033082|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##NM_005376|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##AK223478|TRIT1|54802|tRNA isopentenyltransferase 1##AK304759|TRIT1|54802|tRNA isopentenyltransferase 1##AY303390|TRIT1|54802|tRNA isopentenyltransferase 1##BC128155|TRIT1|54802|tRNA isopentenyltransferase 1##BC128156|TRIT1|54802|tRNA isopentenyltransferase 1##NM_017646|TRIT1|54802|tRNA isopentenyltransferase 1##BC107569|TRIT1|54802|tRNA isopentenyltransferase 1##AK296453|TRIT1|54802|tRNA isopentenyltransferase 1##AK307910|TRIT1|54802|tRNA isopentenyltransferase 1##NM_001136493|MFSD2A|84879|major facilitator superfamily domain containing 2A##NM_032793|MFSD2A|84879|major facilitator superfamily domain containing 2A##BC011587|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK075183|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK301533|MFSD2A|84879|major facilitator superfamily domain containing 2A##AB073383|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK027396|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK297991|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK093223|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK291540|MFSD2A|84879|major facilitator superfamily domain containing 2A##AF289609|MFSD2A|84879|major facilitator superfamily domain containing 2A##AL834184|MFSD2A|84879|major facilitator superfamily domain containing 2A##BC092414|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK074186|MFSD2A|84879|major facilitator superfamily domain containing 2A	0.936401	CTCF.p2:-10:0.936
chr17	27546531	27546691	reg1002224.p2	14.902	+	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	-39261	-	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	-79200	-	AK054958 NM_004740	-143985	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	27266	+	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	74499	-	TSC_hg19_v1_chr17_-_27621167 AK293075 NM_020772	74554	-	CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2	1.001432	CTCF.p2:-9:0.990
chr1	169681275	169681404	reg1002173.p2	14.901	+	AB528958 CU676702 DQ891376 DQ894554 AJ246000 X16150 X17519 BC020758 X16070 AK225713 AK312673 M25280 TSC_hg19_v1_chr1_-_169680762 NM_000655	-580	-	M25322 AK312884 BC068533 NM_003005	-81977	-	TSC_hg19_v1_chr1_-_169555717 AK291613 AK300469 NM_000130	-125600	-	BC131551 M24736 M30640 BC142677 BC142711 AK314214 NM_000450 TSC_hg19_v1_chr1_-_169703221	21860	-	AL035369 NM_033418 AK313909	82693	-	TSC_hg19_v1_chr1_+_169764185 AK303296 BC011012 AK001568 BC091516 AK096493 AK310638 AK299369 EU832166 EU832260	82869	+	DQ891376|SELL|6402|selectin L##DQ894554|SELL|6402|selectin L##AJ246000|SELL|6402|selectin L##X16150|SELL|6402|selectin L##X17519|SELL|6402|selectin L##BC020758|SELL|6402|selectin L##X16070|SELL|6402|selectin L##AK225713|SELL|6402|selectin L##AK312673|SELL|6402|selectin L##M25280|SELL|6402|selectin L##NM_000655|SELL|6402|selectin L##M25322|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##AK312884|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##BC068533|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##NM_003005|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##AK291613|F5|2153|coagulation factor V (proaccelerin, labile factor)##AK300469|F5|2153|coagulation factor V (proaccelerin, labile factor)##NM_000130|F5|2153|coagulation factor V (proaccelerin, labile factor)##BC131551|SELE|6401|selectin E##M24736|SELE|6401|selectin E##M30640|SELE|6401|selectin E##BC142677|SELE|6401|selectin E##BC142711|SELE|6401|selectin E##AK314214|SELE|6401|selectin E##NM_000450|SELE|6401|selectin E##AL035369|METTL18|92342|methyltransferase like 18##NM_033418|METTL18|92342|methyltransferase like 18##AK313909|METTL18|92342|methyltransferase like 18##AK303296|C1orf112|55732|chromosome 1 open reading frame 112##BC011012|C1orf112|55732|chromosome 1 open reading frame 112##AK001568|C1orf112|55732|chromosome 1 open reading frame 112##BC091516|C1orf112|55732|chromosome 1 open reading frame 112##AK096493|C1orf112|55732|chromosome 1 open reading frame 112##AK310638|C1orf112|55732|chromosome 1 open reading frame 112##AK299369|C1orf112|55732|chromosome 1 open reading frame 112##EU832166|C1orf112|55732|chromosome 1 open reading frame 112##EU832260|C1orf112|55732|chromosome 1 open reading frame 112	0.589279	CTCF.p2:14:0.589
chr6	159026433	159026566	reg1002798.p1	14.900	+	BC033450 TSC_hg19_v1_chr6_+_158957752	-68797	+	AB037844 NM_020823	-69032	+	TSC_hg19_v1_chr6_+_158734935 AF087973	-291580	+	AB590427 CR456931 DQ892606 DQ892607 DQ895846 DQ895847 EU862237 U56255 TSC_hg19_v1_chr6_-_159065772 D50663 BC105588 BC029412 AK315601 NM_006519	39275	-	TSC_hg19_v1_chr6_+_159071070 NM_001009991 NM_001242384 NM_001242394 NM_001242395 AK092729 AK298712 AX747692 BC085612	44555	+	J05021 X51521 TSC_hg19_v1_chr6_-_159239246	212723	-	BC033450|TMEM181|57583|transmembrane protein 181##AB037844|TMEM181|57583|transmembrane protein 181##NM_020823|TMEM181|57583|transmembrane protein 181##CR456931|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892606|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892607|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895846|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895847|DYNLT1|6993|dynein, light chain, Tctex-type 1##EU862237|DYNLT1|6993|dynein, light chain, Tctex-type 1##U56255|DYNLT1|6993|dynein, light chain, Tctex-type 1##D50663|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC105588|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC029412|DYNLT1|6993|dynein, light chain, Tctex-type 1##AK315601|DYNLT1|6993|dynein, light chain, Tctex-type 1##NM_006519|DYNLT1|6993|dynein, light chain, Tctex-type 1##NM_001009991|SYTL3|94120|synaptotagmin-like 3##NM_001242384|SYTL3|94120|synaptotagmin-like 3##NM_001242394|SYTL3|94120|synaptotagmin-like 3##NM_001242395|SYTL3|94120|synaptotagmin-like 3##AK092729|SYTL3|94120|synaptotagmin-like 3##AK298712|SYTL3|94120|synaptotagmin-like 3##BC085612|SYTL3|94120|synaptotagmin-like 3##J05021|EZR|7430|ezrin##X51521|EZR|7430|ezrin	0.0	
chr18	61185811	61185921	reg1002785.p1	14.898	+	NM_002639 AK312765 BC020713 AK301667 U04313	-41686	+	AK290932 AK309322 AK311041 TSC_hg19_v1_chr18_-_61089700 BC009692 AK308892 NM_004869	-96143	-	TSC_hg19_v1_chr18_-_61089681 BC039574 AF038960 AF195514	-96195	-	AF411191 BC103884 BC103885 NM_080474	37526	+	NM_012397 AK290323 AK313486 AK296797 AK303867 AK303979 AJ001696 AJ001697 AK298049 BC101821 BC143402 AJ001698	68731	+	U19557 BC008399 BC017401 NM_002974 AK292212	125642	-	NM_002639|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##AK312765|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##BC020713|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##AK301667|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##U04313|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##AK290932|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK309322|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK311041|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##BC009692|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK308892|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##NM_004869|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##BC039574|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AF038960|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AF195514|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AF411191|SERPINB12|89777|serpin peptidase inhibitor, clade B (ovalbumin), member 12##BC103884|SERPINB12|89777|serpin peptidase inhibitor, clade B (ovalbumin), member 12##BC103885|SERPINB12|89777|serpin peptidase inhibitor, clade B (ovalbumin), member 12##NM_080474|SERPINB12|89777|serpin peptidase inhibitor, clade B (ovalbumin), member 12##NM_012397|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK290323|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK313486|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK296797|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK303867|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK303979|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AJ001696|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AJ001697|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK298049|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##BC101821|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##BC143402|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AJ001698|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##U19557|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##BC008399|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##BC017401|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##NM_002974|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##AK292212|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4	0.998348	CTCF.p2:-9:0.998
chr1	150952080	150952204	reg1003241.p1	14.897	+	TSC_hg19_v1_chr1_-_150947489 NM_022075 NM_181746	-4668	-	TSC_hg19_v1_chr1_-_150947321 AK001105	-4829	-	TSC_hg19_v1_chr1_-_150947293 AY091458	-4845	-	NM_003568 AJ009985	2383	+	BC032321 AK303962 AK125493 AK002142 NM_001163259 NM_001163260 TSC_hg19_v1_chr1_-_150979325 BC014447 NM_001040217	26989	-	BC075812 AK301946 NM_001163258 NM_018379	28704	-	NM_022075|CERS2|29956|ceramide synthase 2##NM_181746|CERS2|29956|ceramide synthase 2##AK001105|CERS2|29956|ceramide synthase 2##AY091458|CERS2|29956|ceramide synthase 2##NM_003568|ANXA9|8416|annexin A9##AJ009985|ANXA9|8416|annexin A9##BC032321|FAM63A|55793|family with sequence similarity 63, member A##AK303962|FAM63A|55793|family with sequence similarity 63, member A##AK125493|FAM63A|55793|family with sequence similarity 63, member A##AK002142|FAM63A|55793|family with sequence similarity 63, member A##NM_001163259|FAM63A|55793|family with sequence similarity 63, member A##NM_001163260|FAM63A|55793|family with sequence similarity 63, member A##BC014447|FAM63A|55793|family with sequence similarity 63, member A##NM_001040217|FAM63A|55793|family with sequence similarity 63, member A##BC075812|FAM63A|55793|family with sequence similarity 63, member A##AK301946|FAM63A|55793|family with sequence similarity 63, member A##NM_001163258|FAM63A|55793|family with sequence similarity 63, member A##NM_018379|FAM63A|55793|family with sequence similarity 63, member A	1.921899	CTCF.p2:12:0.996	CTCF.p2:-23:0.865
chr18	57069848	57069963	reg1001450.p2	14.897	+	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	-43419	-	EU831768 EU831846 AY286502 BC065562 BX640655 AB593158 BX648518 BC106887 BC106888 AK123184 NM_181654	-84119	-	BC051901 AF115392 NM_013435 AB593018	-129251	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	294686	-	NM_133459 TSC_hg19_v1_chr18_-_57364656	294745	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	497324	+	DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1##EU831768|CPLX4|339302|complexin 4##EU831846|CPLX4|339302|complexin 4##AY286502|CPLX4|339302|complexin 4##BC065562|CPLX4|339302|complexin 4##BX640655|CPLX4|339302|complexin 4##AB593158|CPLX4|339302|complexin 4##BX648518|CPLX4|339302|complexin 4##BC106887|CPLX4|339302|complexin 4##BC106888|CPLX4|339302|complexin 4##AK123184|CPLX4|339302|complexin 4##NM_181654|CPLX4|339302|complexin 4##BC051901|RAX|30062|retina and anterior neural fold homeobox##AF115392|RAX|30062|retina and anterior neural fold homeobox##NM_013435|RAX|30062|retina and anterior neural fold homeobox##AB593018|RAX|30062|retina and anterior neural fold homeobox##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1	0.0	
chr6	2932522	2932664	reg1002995.p1	14.894	+	TSC_hg19_v1_chr6_-_2903544 BC002538 AB060690 L40378 AK314842 NM_004155	-29085	-	TSC_hg19_v1_chr6_-_2842202 AK304641 AK309765	-90396	-	TSC_hg19_v1_chr6_-_2842095 BC009015 NM_030666 M93056 AK298044 AK312973 AK223370 AK291327	-90511	-	AK098566 TSC_hg19_v1_chr6_-_2971511	38821	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	39218	-	TSC_hg19_v1_chr6_-_2971981 AK314578	39456	-	BC002538|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AB060690|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##L40378|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK314842|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##NM_004155|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK304641|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK309765|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK098566|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314578|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6	0.935878	CTCF.p2:4:0.936
chr5	147007769	147007884	reg1003043.p1	14.893	+	BC077077 NM_001197294 TSC_hg19_v1_chr5_-_146889632	-118200	-	EU007906 CU687310 EU832163 EU832257 TSC_hg19_v1_chr5_-_146889506	-118360	-	CU691634 AB384367 EU832180 EU832273 TSC_hg19_v1_chr5_-_146833229 BC039006 D78014 AK297223 NM_001387 Y07818	-174561	-	BC003189 AB011127 TSC_hg19_v1_chr5_-_147162128 AK291280	154268	-	BC017354 TSC_hg19_v1_chr5_-_147162218	154377	-	AF273057 NM_014790 TSC_hg19_v1_chr5_-_147162254	154428	-	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3##EU007906|DPYSL3|1809|dihydropyrimidinase-like 3##EU832163|DPYSL3|1809|dihydropyrimidinase-like 3##EU832257|DPYSL3|1809|dihydropyrimidinase-like 3##EU832180|DPYSL3|1809|dihydropyrimidinase-like 3##EU832273|DPYSL3|1809|dihydropyrimidinase-like 3##BC039006|DPYSL3|1809|dihydropyrimidinase-like 3##D78014|DPYSL3|1809|dihydropyrimidinase-like 3##AK297223|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3##Y07818|DPYSL3|1809|dihydropyrimidinase-like 3##BC003189|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AB011127|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AK291280|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##BC017354|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AF273057|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##NM_014790|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	0.851102	CTCF.p2:-7:0.851
chr19	11248495	11248632	reg1003406.p1	14.892	+	TSC_hg19_v1_chr19_+_11200148 AB209409 BC014514 AY114155 AB384938 DQ893879 BT007361	-48378	+	TSC_hg19_v1_chr19_+_11200138 AK295612 AK296312 AK299038 AK300313	-48431	+	NM_000527 NM_001195798 NM_001195799 NM_001195800 NM_001195802 NM_001195803 TSC_hg19_v1_chr19_+_11200115	-48486	+	AY456387 TSC_hg19_v1_chr19_-_11266459 AK075287 AK303157 AK303266 BC105037 BC105039 NM_182513	17904	-	AB528156 AY639929 CU687364 NM_015493	56662	-	TSC_hg19_v1_chr19_-_11308222 BC082762 AB284125 NM_001136191	59695	-	AB209409|LDLR|3949|low density lipoprotein receptor##BC014514|LDLR|3949|low density lipoprotein receptor##AY114155|LDLR|3949|low density lipoprotein receptor##DQ893879|LDLR|3949|low density lipoprotein receptor##BT007361|LDLR|3949|low density lipoprotein receptor##AK295612|LDLR|3949|low density lipoprotein receptor##AK296312|LDLR|3949|low density lipoprotein receptor##AK299038|LDLR|3949|low density lipoprotein receptor##AK300313|LDLR|3949|low density lipoprotein receptor##NM_000527|LDLR|3949|low density lipoprotein receptor##NM_001195798|LDLR|3949|low density lipoprotein receptor##NM_001195799|LDLR|3949|low density lipoprotein receptor##NM_001195800|LDLR|3949|low density lipoprotein receptor##NM_001195802|LDLR|3949|low density lipoprotein receptor##NM_001195803|LDLR|3949|low density lipoprotein receptor##AY456387|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK075287|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK303157|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK303266|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC105037|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC105039|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_182513|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2##BC082762|KANK2|25959|KN motif and ankyrin repeat domains 2##AB284125|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_001136191|KANK2|25959|KN motif and ankyrin repeat domains 2	0.165829	
chr6	12894203	12894373	reg1002158.p2	14.892	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-177245	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-177345	+	TSC_hg19_v1_chr6_+_12514301 D28417	-379986	+	AK091836 AX747210 NM_001242698	401529	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	434412	-	AK027010 NM_001242630	514080	-	AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.972549	CTCF.p2:19:0.973
chr10	112506252	112506407	reg1002655.p1	14.891	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-102200	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-162214	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-178837	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	125283	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	125385	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	172367	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.997852	CTCF.p2:-26:0.998
chr10	50615730	50615849	reg1003086.p1	14.891	+	NM_001080520	-15883	-	AK127811 NM_001135196 NM_199459 TSC_hg19_v1_chr10_+_50507214 AL833265	-108578	+	DQ884399 TSC_hg19_v1_chr10_-_50396437 BC047724 BC104438 BC104439 NM_001010863 BC037922 BC042857 AK303891	-219363	-	BC028954 AK074682 BC063690 NM_170753	116461	-	TSC_hg19_v1_chr10_-_50747072 BC127104 L04791	131268	-	TSC_hg19_v1_chr10_-_50747117 AK291018 NM_000124	131336	-	NM_001080520|DRGX|644168|dorsal root ganglia homeobox##AK127811|C10orf71|118461|chromosome 10 open reading frame 71##NM_001135196|C10orf71|118461|chromosome 10 open reading frame 71##NM_199459|C10orf71|118461|chromosome 10 open reading frame 71##AL833265|C10orf71|118461|chromosome 10 open reading frame 71##DQ884399|C10orf128|170371|chromosome 10 open reading frame 128##BC047724|C10orf128|170371|chromosome 10 open reading frame 128##BC104438|C10orf128|170371|chromosome 10 open reading frame 128##BC104439|C10orf128|170371|chromosome 10 open reading frame 128##NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128##BC037922|C10orf128|170371|chromosome 10 open reading frame 128##BC042857|C10orf128|170371|chromosome 10 open reading frame 128##BC028954|PGBD3|267004|piggyBac transposable element derived 3##AK074682|PGBD3|267004|piggyBac transposable element derived 3##BC063690|PGBD3|267004|piggyBac transposable element derived 3##NM_170753|PGBD3|267004|piggyBac transposable element derived 3##BC127104|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6##L04791|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6##AK291018|PGBD3|267004|piggyBac transposable element derived 3##NM_000124|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6	0.99964	CTCF.p2:-3:1.000
chr15	41186405	41186527	reg1001968.p2	14.890	+	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	-20019	-	TSC_hg19_v1_chr15_+_41136676 NM_001032367 AK303899 BC004140 BT007425 CU676280 DQ890747 DQ892293 DQ895493	-49765	+	TSC_hg19_v1_chr15_+_41136245 AK314825 AK300195 NM_003710 NM_181642 BC018702 AY358969 AB000095 AY296715	-50116	+	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	234	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	35232	+	NM_001142776 NM_024111 TSC_hg19_v1_chr15_+_41245671 BC019625 BC001683 BC001847 AY702027	59238	+	AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)##NM_001142776|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##NM_024111|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC019625|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001683|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001847|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AY702027|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)	0.925418	CTCF.p2:-5:0.501	CTCF.p2:92:0.414
chr2	211060302	211060422	reg1002341.p1	14.890	+	TSC_hg19_v1_chr2_-_211036099 BC126155 BC143914 BC032837 NM_152519 AK308432	-24312	-	AK124963 TSC_hg19_v1_chr2_-_211035462	-24942	-	TSC_hg19_v1_chr2_-_211018294 AK074441 BC070141	-42021	-	BC064549 BC039063 AK313498 AK296161 NM_001608	29818	-	X05451 M20643 AK311892 BC005318 NM_079422	107964	-	AB527940 CR456869 TSC_hg19_v1_chr2_-_211179896 NM_079420 AK311942	119477	-	BC126155|C2orf67|151050|chromosome 2 open reading frame 67##BC143914|C2orf67|151050|chromosome 2 open reading frame 67##BC032837|C2orf67|151050|chromosome 2 open reading frame 67##NM_152519|C2orf67|151050|chromosome 2 open reading frame 67##AK308432|C2orf67|151050|chromosome 2 open reading frame 67##AK124963|C2orf67|151050|chromosome 2 open reading frame 67##AK074441|C2orf67|151050|chromosome 2 open reading frame 67##BC070141|C2orf67|151050|chromosome 2 open reading frame 67##BC064549|ACADL|33|acyl-CoA dehydrogenase, long chain##BC039063|ACADL|33|acyl-CoA dehydrogenase, long chain##AK313498|ACADL|33|acyl-CoA dehydrogenase, long chain##AK296161|ACADL|33|acyl-CoA dehydrogenase, long chain##NM_001608|ACADL|33|acyl-CoA dehydrogenase, long chain##X05451|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##M20643|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##AK311892|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##BC005318|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##NM_079422|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	0.917038	CTCF.p2:21:0.917
chr3	185959712	185959849	reg1002940.p1	14.890	+	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	-132924	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	-133434	-	TSC_hg19_v1_chr3_-_185655843 AK315632 NM_001243879 NM_004593	-303902	-	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	120154	-	CU686840 AF161703 BC069478 AK314172 NM_017541	302360	-	TSC_hg19_v1_chr3_-_186285118 AK001422 BC025748	325328	-	BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AF161703|CRYGS|1427|crystallin, gamma S##BC069478|CRYGS|1427|crystallin, gamma S##AK314172|CRYGS|1427|crystallin, gamma S##NM_017541|CRYGS|1427|crystallin, gamma S##AK001422|TBCCD1|55171|TBCC domain containing 1##BC025748|TBCCD1|55171|TBCC domain containing 1	0.994381	CTCF.p2:13:0.994
chr10	71674524	71674664	reg1003695.p1	14.888	+	TSC_hg19_v1_chr10_+_71562275 M59217	-112303	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	-112905	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	-112937	+	NM_018649	137762	+	TSC_hg19_v1_chr10_+_71812601 BC016172 AK022776 AK131057 AF151534 AF336304 AK022475	138003	+	TSC_hg19_v1_chr10_-_71892569 AK027403	217954	-	M59217|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##NM_018649|H2AFY2|55506|H2A histone family, member Y2##BC016172|H2AFY2|55506|H2A histone family, member Y2##AK022776|H2AFY2|55506|H2A histone family, member Y2##AK131057|H2AFY2|55506|H2A histone family, member Y2##AF151534|H2AFY2|55506|H2A histone family, member Y2##AF336304|H2AFY2|55506|H2A histone family, member Y2##AK022475|H2AFY2|55506|H2A histone family, member Y2##AK027403|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2	1.009224	CTCF.p2:-2:0.993
chr2	11919420	11919548	reg1002982.p1	14.887	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-32709	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-109193	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-236641	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	937769	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	938432	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	938913	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.999266	CTCF.p2:6:0.999
chr11	133797631	133797759	reg1002873.p1	14.886	+	AF521713 AK098717 NM_174927 BC058039	-82314	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	-395381	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-984090	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	29187	-	AJ416101 NM_001205329 NM_032801 AY358335 TSC_hg19_v1_chr11_+_133938938 AK074769 AF448478	141186	+	AK075309 AK125071 AK225666 TSC_hg19_v1_chr11_+_133938965 BC057284 AJ344431 AF356518 BC012147 BC010690	141277	+	AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B##AJ416101|JAM3|83700|junctional adhesion molecule 3##NM_001205329|JAM3|83700|junctional adhesion molecule 3##NM_032801|JAM3|83700|junctional adhesion molecule 3##AY358335|JAM3|83700|junctional adhesion molecule 3##AK074769|JAM3|83700|junctional adhesion molecule 3##AF448478|JAM3|83700|junctional adhesion molecule 3##AK075309|JAM3|83700|junctional adhesion molecule 3##AK125071|JAM3|83700|junctional adhesion molecule 3##AK225666|JAM3|83700|junctional adhesion molecule 3##BC057284|JAM3|83700|junctional adhesion molecule 3##AJ344431|JAM3|83700|junctional adhesion molecule 3##AF356518|JAM3|83700|junctional adhesion molecule 3##BC012147|JAM3|83700|junctional adhesion molecule 3##BC010690|JAM3|83700|junctional adhesion molecule 3	0.0	
chr19	12876925	12877034	reg1002315.p1	14.886	+	AF440756 AY515705 NM_017682 AK000139 AK225232	-13541	+	TSC_hg19_v1_chr19_+_12848310 NM_004317 AK223363 AK291855 AK293588 AF047469 BC002651 CU678092 U60276	-28655	+	TSC_hg19_v1_chr19_-_12845557 BC040846	-31431	-	CU680326 DQ891339 DQ893360 DQ894521 DQ896679 AB527820 TSC_hg19_v1_chr19_-_12886342 AF044924 BC012443	9348	-	TSC_hg19_v1_chr19_-_12886422 NM_001100176 NM_013312	9448	-	TSC_hg19_v1_chr19_+_12902286 DQ650707	25311	+	AF440756|BEST2|54831|bestrophin 2##AY515705|BEST2|54831|bestrophin 2##NM_017682|BEST2|54831|bestrophin 2##AK000139|BEST2|54831|bestrophin 2##AK225232|BEST2|54831|bestrophin 2##NM_004317|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##AK223363|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##AK291855|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##AK293588|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##AF047469|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##BC002651|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##U60276|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##BC040846|C19orf43|79002|chromosome 19 open reading frame 43##DQ891339|HOOK2|29911|hook homolog 2 (Drosophila)##DQ893360|HOOK2|29911|hook homolog 2 (Drosophila)##DQ894521|HOOK2|29911|hook homolog 2 (Drosophila)##DQ896679|HOOK2|29911|hook homolog 2 (Drosophila)##AF044924|HOOK2|29911|hook homolog 2 (Drosophila)##BC012443|HOOK2|29911|hook homolog 2 (Drosophila)##NM_001100176|HOOK2|29911|hook homolog 2 (Drosophila)##NM_013312|HOOK2|29911|hook homolog 2 (Drosophila)	0.987218	CTCF.p2:-16:0.987
chr7	115820399	115820524	reg1003046.p1	14.883	+	TSC_hg19_v1_chr7_-_115670864 CR933605 NM_001018058 NM_012252	-149609	-	TSC_hg19_v1_chr7_-_115670820 AK313546	-149643	-	TSC_hg19_v1_chr7_-_115670796 D43945 BC029891	-149675	-	NM_015641 AK299104 TSC_hg19_v1_chr7_+_115850592 BC001451 AK021575 AK300546 AK309324 AK222840 AF245356 AJ250865 AK315644 AB529039 EU176352 EU176694	30192	+	AK310995 NM_152829 AK291802 AF245357	42558	+	TSC_hg19_v1_chr7_+_116139705 AY353255 BC005256 NM_001206747 NM_001233 NM_198212 AK310786 AK311964 AF035752 AB451285 AB451417 AB489180 AM393815 BT007051 CR407685	319266	+	CR933605|TFEC|22797|transcription factor EC##NM_001018058|TFEC|22797|transcription factor EC##NM_012252|TFEC|22797|transcription factor EC##AK313546|TFEC|22797|transcription factor EC##D43945|TFEC|22797|transcription factor EC##BC029891|TFEC|22797|transcription factor EC##NM_015641|TES|26136|testis derived transcript (3 LIM domains)##AK299104|TES|26136|testis derived transcript (3 LIM domains)##BC001451|TES|26136|testis derived transcript (3 LIM domains)##AK021575|TES|26136|testis derived transcript (3 LIM domains)##AK300546|TES|26136|testis derived transcript (3 LIM domains)##AK309324|TES|26136|testis derived transcript (3 LIM domains)##AK222840|TES|26136|testis derived transcript (3 LIM domains)##AF245356|TES|26136|testis derived transcript (3 LIM domains)##AJ250865|TES|26136|testis derived transcript (3 LIM domains)##AK315644|TES|26136|testis derived transcript (3 LIM domains)##EU176352|TES|26136|testis derived transcript (3 LIM domains)##EU176694|TES|26136|testis derived transcript (3 LIM domains)##AK310995|TES|26136|testis derived transcript (3 LIM domains)##NM_152829|TES|26136|testis derived transcript (3 LIM domains)##AK291802|TES|26136|testis derived transcript (3 LIM domains)##AF245357|TES|26136|testis derived transcript (3 LIM domains)##AY353255|CAV2|858|caveolin 2##BC005256|CAV2|858|caveolin 2##NM_001206747|CAV2|858|caveolin 2##NM_001233|CAV2|858|caveolin 2##NM_198212|CAV2|858|caveolin 2##AK310786|CAV2|858|caveolin 2##AK311964|CAV2|858|caveolin 2##AF035752|CAV2|858|caveolin 2##AB451285|CAV2|858|caveolin 2##AB451417|CAV2|858|caveolin 2##AM393815|CAV2|858|caveolin 2##BT007051|CAV2|858|caveolin 2##CR407685|CAV2|858|caveolin 2	0.868197	CTCF.p2:-9:0.868
chr17	48624379	48624495	reg1002079.p1	14.882	+	TSC_hg19_v1_chr17_+_48610095 AK000785 AK291658 AK292977 AK295730 AK296346 AK300642 BC001038 BC051365 BC077722	-14334	+	TSC_hg19_v1_chr17_+_48610049 NM_017957	-14390	+	TSC_hg19_v1_chr17_+_48585945 BC028393 AB083068 AK314052 AL832225	-38479	+	AK092731 TSC_hg19_v1_chr17_+_48624553 BC111029 AK025000 AK225189 AK291805 BC025255 NM_022827 BC065526 AK308616	121	+	TSC_hg19_v1_chr17_+_48638339 BC110995 AF124351 NM_018896 NM_198376 NM_198377 NM_198378 NM_198379 NM_198380 NM_198382 NM_198383 NM_198384 NM_198385 NM_198386 NM_198387 NM_198388 NM_198396 NM_198397	13956	+	TSC_hg19_v1_chr17_+_48712188 BC046126 NM_001144070 NM_003786 AF009670 Y17151 BC058907 AF085690 AF085691 AF085692 BC104952 BC137347 BC137348 AB208954 AF083552 AB010887 BC050370 AF104943 AB384796	87772	+	AK000785|EPN3|55040|epsin 3##AK291658|EPN3|55040|epsin 3##AK292977|EPN3|55040|epsin 3##AK295730|EPN3|55040|epsin 3##AK296346|EPN3|55040|epsin 3##AK300642|EPN3|55040|epsin 3##BC001038|EPN3|55040|epsin 3##BC051365|EPN3|55040|epsin 3##BC077722|EPN3|55040|epsin 3##NM_017957|EPN3|55040|epsin 3##BC028393|MYCBPAP|84073|MYCBP associated protein##AB083068|MYCBPAP|84073|MYCBP associated protein##AK314052|MYCBPAP|84073|MYCBP associated protein##AL832225|MYCBPAP|84073|MYCBP associated protein##AK092731|SPATA20|64847|spermatogenesis associated 20##BC111029|SPATA20|64847|spermatogenesis associated 20##AK025000|SPATA20|64847|spermatogenesis associated 20##AK225189|SPATA20|64847|spermatogenesis associated 20##AK291805|SPATA20|64847|spermatogenesis associated 20##BC025255|SPATA20|64847|spermatogenesis associated 20##NM_022827|SPATA20|64847|spermatogenesis associated 20##BC065526|SPATA20|64847|spermatogenesis associated 20##AK308616|SPATA20|64847|spermatogenesis associated 20##BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##BC046126|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_001144070|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_003786|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF009670|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##Y17151|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC058907|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085690|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085691|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085692|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC104952|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137347|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137348|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB208954|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF083552|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB010887|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC050370|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF104943|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3	0.0	
chr11	72896367	72896498	reg1003223.p1	14.880	+	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	-43383	-	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-370950	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-371027	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	32912	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	33014	+	AK313942 TSC_hg19_v1_chr11_+_72929608	33184	+	AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.046014	
chr12	56907640	56907785	reg1003740.p1	14.880	+	AK289471 BC025661 BC036929 AK000467 AF110330 AK303772 AF223944 AK294822 BC119767 BC119768 BC059370 BC048344 NM_013267	-25672	-	NM_207344 TSC_hg19_v1_chr12_+_56862350 AF451989 AK300594 AL832247 BC020844 AK291920 BX647957 AK074733 AF289571	-45360	+	HQ258134 BC074913 BC117474 NM_012064	-59296	-	TSC_hg19_v1_chr12_+_56915603 NM_002898 BC072679 AK308885 AK293315 AK304540 D28483 AK299580 BC027863 CU693300	7985	+	AF000422 TSC_hg19_v1_chr12_-_57006969	99204	-	AK023830 TSC_hg19_v1_chr12_-_57009380	101664	-	AK289471|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC025661|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC036929|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK000467|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF110330|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK303772|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF223944|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK294822|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119767|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119768|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC059370|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC048344|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_013267|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_207344|SPRYD4|283377|SPRY domain containing 4##AF451989|SPRYD4|283377|SPRY domain containing 4##AK300594|SPRYD4|283377|SPRY domain containing 4##AL832247|SPRYD4|283377|SPRY domain containing 4##BC020844|SPRYD4|283377|SPRY domain containing 4##AK291920|SPRYD4|283377|SPRY domain containing 4##BX647957|SPRYD4|283377|SPRY domain containing 4##AK074733|SPRYD4|283377|SPRY domain containing 4##AF289571|SPRYD4|283377|SPRY domain containing 4##HQ258134|MIP|4284|major intrinsic protein of lens fiber##BC074913|MIP|4284|major intrinsic protein of lens fiber##BC117474|MIP|4284|major intrinsic protein of lens fiber##NM_012064|MIP|4284|major intrinsic protein of lens fiber##NM_002898|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC072679|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK308885|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK293315|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK304540|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##D28483|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK299580|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC027863|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AF000422|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023830|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A	0.953876	CTCF.p2:-13:0.954
chr20	36530697	36530833	reg1003301.p1	14.880	+	TSC_hg19_v1_chr20_+_36322503 AF370431 AK293420	-208282	+	AK074663 AK130301 TSC_hg19_v1_chr20_+_36322443	-208321	+	TSC_hg19_v1_chr20_+_36322440 NM_030877 BC121005 BC121006 AF239607	-208335	+	NM_080607 AK056177 TSC_hg19_v1_chr20_+_36531528 AL834410	751	+	TSC_hg19_v1_chr20_+_36531556 BC033818	792	+	BC013755 TSC_hg19_v1_chr20_-_36661845 BC013121 NM_014657 AK308164 BC107778	131078	-	AF370431|CTNNBL1|56259|catenin, beta like 1##AK293420|CTNNBL1|56259|catenin, beta like 1##AK074663|CTNNBL1|56259|catenin, beta like 1##AK130301|CTNNBL1|56259|catenin, beta like 1##NM_030877|CTNNBL1|56259|catenin, beta like 1##BC121005|CTNNBL1|56259|catenin, beta like 1##BC121006|CTNNBL1|56259|catenin, beta like 1##AF239607|CTNNBL1|56259|catenin, beta like 1##NM_080607|VSTM2L|128434|V-set and transmembrane domain containing 2 like##AK056177|VSTM2L|128434|V-set and transmembrane domain containing 2 like##AL834410|VSTM2L|128434|V-set and transmembrane domain containing 2 like##BC033818|VSTM2L|128434|V-set and transmembrane domain containing 2 like##BC013755|TTI1|9675|TELO2 interacting protein 1##BC013121|TTI1|9675|TELO2 interacting protein 1##NM_014657|TTI1|9675|TELO2 interacting protein 1##AK308164|TTI1|9675|TELO2 interacting protein 1##BC107778|TTI1|9675|TELO2 interacting protein 1	0.9147	CTCF.p2:-18:0.915
chr17	55208440	55208575	reg1003519.p1	14.879	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-45364	+	TSC_hg19_v1_chr17_+_55162639 NM_003488 BC000729 X97335	-45893	+	NM_021626 TSC_hg19_v1_chr17_+_55055513 AY358559 AF282618 AK027373 BC010078 AK298161 CU687218 BC072405 AF113214	-153003	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	125466	+	AK093888 AX748353 NM_170721	125866	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	718897	-	NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_003488|AKAP1|8165|A kinase (PRKA) anchor protein 1##BC000729|AKAP1|8165|A kinase (PRKA) anchor protein 1##X97335|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_021626|SCPEP1|59342|serine carboxypeptidase 1##AY358559|SCPEP1|59342|serine carboxypeptidase 1##AF282618|SCPEP1|59342|serine carboxypeptidase 1##AK027373|SCPEP1|59342|serine carboxypeptidase 1##BC010078|SCPEP1|59342|serine carboxypeptidase 1##AK298161|SCPEP1|59342|serine carboxypeptidase 1##BC072405|SCPEP1|59342|serine carboxypeptidase 1##AF113214|SCPEP1|59342|serine carboxypeptidase 1##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23	0.998969	CTCF.p2:5:0.999
chr20	36793801	36793913	reg1001394.p2	14.879	+	TSC_hg19_v1_chr20_-_36793673 AK291714 AK058031 AK295775 AK300292 AK314618 BC003551 NM_004613 NM_198951	-178	-	TSC_hg19_v1_chr20_-_36758362 M98479	-35466	-	TSC_hg19_v1_chr20_+_36662228 AB463518 CU689672	-131580	+	AK096202 NM_001029864	95316	-	NM_001725 BC040955 TSC_hg19_v1_chr20_+_36932591 AK315328 AX713278 AX746123 AX752831 J04739 AK296568 BC032230 CU691936 DQ414688 AF322588	138731	+	TSC_hg19_v1_chr20_+_36974884 AK313625 BC022256 NM_004139 AY344471 AF105067 AB590524 CU692512 DQ891394 DQ894434 M35533	181014	+	AK291714|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK058031|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK295775|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK300292|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK314618|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC003551|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_004613|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_198951|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##M98479|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755##NM_001725|BPI|671|bactericidal/permeability-increasing protein##BC040955|BPI|671|bactericidal/permeability-increasing protein##AK315328|BPI|671|bactericidal/permeability-increasing protein##AX713278|BPI|671|bactericidal/permeability-increasing protein##AX746123|BPI|671|bactericidal/permeability-increasing protein##AX752831|BPI|671|bactericidal/permeability-increasing protein##J04739|BPI|671|bactericidal/permeability-increasing protein##AK296568|BPI|671|bactericidal/permeability-increasing protein##BC032230|BPI|671|bactericidal/permeability-increasing protein##DQ414688|BPI|671|bactericidal/permeability-increasing protein##AF322588|BPI|671|bactericidal/permeability-increasing protein##AK313625|LBP|3929|lipopolysaccharide binding protein##BC022256|LBP|3929|lipopolysaccharide binding protein##NM_004139|LBP|3929|lipopolysaccharide binding protein##AY344471|LBP|3929|lipopolysaccharide binding protein##AF105067|LBP|3929|lipopolysaccharide binding protein##DQ891394|LBP|3929|lipopolysaccharide binding protein##DQ894434|LBP|3929|lipopolysaccharide binding protein##M35533|LBP|3929|lipopolysaccharide binding protein	0.491165	CTCF.p2:0:0.456
chr15	45260180	45260304	reg1002812.p1	14.877	+	BC029537 NM_152448 DQ890983 DQ894158	-11334	+	NM_080745 NM_182985	-231683	+	BC031266 TSC_hg19_v1_chr15_+_45021331	-238911	+	NM_003104 TSC_hg19_v1_chr15_+_45315395 AK312444 U07361 L29008 BC021085 AK295656 AK296574 AK309672 BC025295 AB529056 DQ892769 DQ896016	55148	+	TSC_hg19_v1_chr15_-_45406336 AF230496	146089	-	TSC_hg19_v1_chr15_-_45406363 AF267981 NM_014080	146121	-	BC029537|C15orf43|145645|chromosome 15 open reading frame 43##NM_152448|C15orf43|145645|chromosome 15 open reading frame 43##DQ890983|C15orf43|145645|chromosome 15 open reading frame 43##DQ894158|C15orf43|145645|chromosome 15 open reading frame 43##NM_080745|TRIM69|140691|tripartite motif containing 69##NM_182985|TRIM69|140691|tripartite motif containing 69##BC031266|TRIM69|140691|tripartite motif containing 69##NM_003104|SORD|6652|sorbitol dehydrogenase##AK312444|SORD|6652|sorbitol dehydrogenase##U07361|SORD|6652|sorbitol dehydrogenase##L29008|SORD|6652|sorbitol dehydrogenase##BC021085|SORD|6652|sorbitol dehydrogenase##AK296574|SORD|6652|sorbitol dehydrogenase##AK309672|SORD|6652|sorbitol dehydrogenase##BC025295|SORD|6652|sorbitol dehydrogenase##DQ892769|SORD|6652|sorbitol dehydrogenase##DQ896016|SORD|6652|sorbitol dehydrogenase##AF230496|DUOX2|50506|dual oxidase 2##AF267981|DUOX2|50506|dual oxidase 2##NM_014080|DUOX2|50506|dual oxidase 2	0.368185	CTCF.p2:-9:0.368
chr11	47433833	47433955	reg1003133.p1	14.875	+	TSC_hg19_v1_chr11_+_47430149 BC008853 BC019016	-3722	+	NM_001128225 NM_152264 TSC_hg19_v1_chr11_+_47430053	-3835	+	TSC_hg19_v1_chr11_-_47400097 X52056 NM_001080547 NM_003120	-33783	-	TSC_hg19_v1_chr11_-_47447457 CR456731	13569	-	M34079 TSC_hg19_v1_chr11_-_47447799 AK222485 AK291896 DQ892981 DQ896229	13911	-	BC106920 TSC_hg19_v1_chr11_-_47447991 BC073165 BC107804 BC008713 AK313518 NM_002804	14087	-	BC008853|SLC39A13|91252|solute carrier family 39 (zinc transporter), member 13##BC019016|SLC39A13|91252|solute carrier family 39 (zinc transporter), member 13##NM_001128225|SLC39A13|91252|solute carrier family 39 (zinc transporter), member 13##NM_152264|SLC39A13|91252|solute carrier family 39 (zinc transporter), member 13##X52056|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##NM_001080547|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##NM_003120|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##CR456731|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##M34079|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##AK222485|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##AK291896|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##DQ892981|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##DQ896229|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##BC106920|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##BC073165|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##BC107804|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##BC008713|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##AK313518|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##NM_002804|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3	0.994643	CTCF.p2:-2:0.995
chr9	139062239	139062372	reg1003063.p1	14.874	+	TSC_hg19_v1_chr9_-_139010722 NM_152833	-51576	-	BC014304 BC013282 TSC_hg19_v1_chr9_-_139010700 AK023162 AK091349 AX746927 BC021231	-51635	-	BC092490 BC111053 TSC_hg19_v1_chr9_-_139010485	-51870	-	AB590758 AB593065 AF156889 NM_014564 AB593066 TSC_hg19_v1_chr9_-_139095090	32683	-	AF156888 NM_178138 AB593067 AB593063 AB593062	34659	-	BC047604 AB527428 TSC_hg19_v1_chr9_-_139137659 AJ318051 NM_181701	75380	-	NM_152833|C9orf69|90120|chromosome 9 open reading frame 69##BC014304|C9orf69|90120|chromosome 9 open reading frame 69##BC013282|C9orf69|90120|chromosome 9 open reading frame 69##AK023162|C9orf69|90120|chromosome 9 open reading frame 69##AK091349|C9orf69|90120|chromosome 9 open reading frame 69##BC021231|C9orf69|90120|chromosome 9 open reading frame 69##BC092490|C9orf69|90120|chromosome 9 open reading frame 69##BC111053|C9orf69|90120|chromosome 9 open reading frame 69##AB593065|LHX3|8022|LIM homeobox 3##AF156889|LHX3|8022|LIM homeobox 3##NM_014564|LHX3|8022|LIM homeobox 3##AB593066|LHX3|8022|LIM homeobox 3##AF156888|LHX3|8022|LIM homeobox 3##NM_178138|LHX3|8022|LIM homeobox 3##AB593067|LHX3|8022|LIM homeobox 3##AB593063|LHX3|8022|LIM homeobox 3##AB593062|LHX3|8022|LIM homeobox 3##BC047604|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##AJ318051|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##NM_181701|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2	0.747906	CTCF.p2:-2:0.748
chr11	32814537	32814666	reg1003010.p1	14.873	+	TSC_hg19_v1_chr11_+_32605376 AK131064 AK292139 AK304378 AK001768 AK300002 AF064603 BC051292 BC011937 BC019103 NM_006360 AK222564 AK307121 CU676384 AY769947 CR450300 DQ185042	-209203	+	TSC_hg19_v1_chr11_+_32605343 AK312512	-209261	+	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	-357532	-	BC146800 AK131470 NM_001008391 BC062749	1576	-	TSC_hg19_v1_chr11_+_32851476 BC010052 NM_024081 BC063393 AF326351	36949	+	TSC_hg19_v1_chr11_+_32914677 BC112935 NM_001076786	99974	+	AK131064|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK292139|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK304378|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK001768|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK300002|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AF064603|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC051292|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC011937|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC019103|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##NM_006360|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK222564|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK307121|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AY769947|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##CR450300|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##DQ185042|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK312512|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1##BC146800|CCDC73|493860|coiled-coil domain containing 73##AK131470|CCDC73|493860|coiled-coil domain containing 73##NM_001008391|CCDC73|493860|coiled-coil domain containing 73##BC062749|CCDC73|493860|coiled-coil domain containing 73##BC010052|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##NM_024081|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC063393|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##AF326351|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC112935|QSER1|79832|glutamine and serine rich 1##NM_001076786|QSER1|79832|glutamine and serine rich 1	0.978173	CTCF.p2:8:0.978
chr12	93963464	93963598	reg1003181.p1	14.873	+	NM_014050 NM_172177 TSC_hg19_v1_chr12_+_93861292 AF135160 AF078860 AL136659 AK000285 AF151038 CR749344	-102252	+	TSC_hg19_v1_chr12_-_93836008 NM_003348	-127507	-	TSC_hg19_v1_chr12_-_93835724 BC000396	-127793	-	NM_003877	66	+	TSC_hg19_v1_chr12_-_93964654 AK123812	1132	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	1289	+	NM_014050|MRPL42|28977|mitochondrial ribosomal protein L42##NM_172177|MRPL42|28977|mitochondrial ribosomal protein L42##AF135160|MRPL42|28977|mitochondrial ribosomal protein L42##AF078860|MRPL42|28977|mitochondrial ribosomal protein L42##AL136659|MRPL42|28977|mitochondrial ribosomal protein L42##AK000285|MRPL42|28977|mitochondrial ribosomal protein L42##AF151038|MRPL42|28977|mitochondrial ribosomal protein L42##CR749344|MRPL42|28977|mitochondrial ribosomal protein L42##NM_003348|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC000396|UBE2N|7334|ubiquitin-conjugating enzyme E2N##NM_003877|SOCS2|8835|suppressor of cytokine signaling 2##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2	0.067398	
chr19	12675005	12675141	reg1002186.p2	14.872	+	BC136728 BC136729 TSC_hg19_v1_chr19_-_12662297 BC065023 AK095600 BC028367 AK092760 AX747711 BX647959 NM_144976	-12800	-	TSC_hg19_v1_chr19_-_12595631 NM_152601	-79445	-	BC136746 BC136751 AK290911 TSC_hg19_v1_chr19_-_12595603 BC036481	-79497	-	AB385437 CU691590 EU446833 BC038586 AB033024 NM_020714 TSC_hg19_v1_chr19_-_12721628	46488	-	AK307775 NM_153358 AK298597 TSC_hg19_v1_chr19_+_12721749 AX721060 AK074877 AK297715 BC106937 BC106938	46691	+	TSC_hg19_v1_chr19_-_12777530 U68382 U68567 AB209921 DQ891878 DQ895066 AB527181 U60266 BC000736	102439	-	BC136728|ZNF564|163050|zinc finger protein 564##BC136729|ZNF564|163050|zinc finger protein 564##BC065023|ZNF564|163050|zinc finger protein 564##BC028367|ZNF564|163050|zinc finger protein 564##AK092760|ZNF564|163050|zinc finger protein 564##BX647959|ZNF564|163050|zinc finger protein 564##NM_144976|ZNF564|163050|zinc finger protein 564##NM_152601|ZNF709|163051|zinc finger protein 709##BC136746|ZNF709|163051|zinc finger protein 709##BC136751|ZNF709|163051|zinc finger protein 709##AK290911|ZNF709|163051|zinc finger protein 709##BC036481|ZNF709|163051|zinc finger protein 709##EU446833|ZNF490|57474|zinc finger protein 490##BC038586|ZNF490|57474|zinc finger protein 490##AB033024|ZNF490|57474|zinc finger protein 490##NM_020714|ZNF490|57474|zinc finger protein 490##AK307775|ZNF791|163049|zinc finger protein 791##NM_153358|ZNF791|163049|zinc finger protein 791##AK298597|ZNF791|163049|zinc finger protein 791##AK074877|ZNF791|163049|zinc finger protein 791##AK297715|ZNF791|163049|zinc finger protein 791##BC106937|ZNF791|163049|zinc finger protein 791##BC106938|ZNF791|163049|zinc finger protein 791##U68382|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##U68567|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##AB209921|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##DQ891878|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##DQ895066|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##U60266|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##BC000736|MAN2B1|4125|mannosidase, alpha, class 2B, member 1	0.342908	CTCF.p2:-3:0.343
chr1	20820397	20820527	reg1003189.p1	14.871	+	NM_018584 TSC_hg19_v1_chr1_-_20812743	-7681	-	AY204901 TSC_hg19_v1_chr1_-_20812323	-8164	-	NM_001039500 AK125833	-203042	+	EU935008 AB528298 AM393331 AM393690 TSC_hg19_v1_chr1_-_20834605 BC014010 BC010101	14098	-	TSC_hg19_v1_chr1_-_20834623 AB097015 AL833889 AK293430 AK303820 AK022937 NM_024544	14179	-	AK126900 NM_207334 TSC_hg19_v1_chr1_+_20879013 BC142686	58524	+	NM_018584|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##AY204901|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##NM_001039500|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AK125833|VWA5B1|127731|von Willebrand factor A domain containing 5B1##EU935008|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AM393331|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AM393690|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC014010|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC010101|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AB097015|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AL833889|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK293430|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK303820|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK022937|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##NM_024544|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK126900|FAM43B|163933|family with sequence similarity 43, member B##NM_207334|FAM43B|163933|family with sequence similarity 43, member B##BC142686|FAM43B|163933|family with sequence similarity 43, member B	0.997013	CTCF.p2:4:0.997
chr17	64902906	64903046	reg1003220.p1	14.871	+	BC101633 NM_145811 BC101607 AF361351 AF458898	-29556	+	AK290171 TSC_hg19_v1_chr17_+_64831234	-71741	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	-604049	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	57913	+	NM_000727 L07738 AK313852 BC113486 BC113492 BC069493 HQ258641	137735	+	D29677 AK310217 TSC_hg19_v1_chr17_-_65241302 BC130582 BC144083	338313	-	BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##NM_000727|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##L07738|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##AK313852|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113486|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113492|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC069493|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##HQ258641|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##D29677|HELZ|9931|helicase with zinc finger##AK310217|HELZ|9931|helicase with zinc finger##BC130582|HELZ|9931|helicase with zinc finger##BC144083|HELZ|9931|helicase with zinc finger	0.310073	CTCF.p2:7:0.310
chr1	31252547	31252675	reg1001943.p2	14.870	+	TSC_hg19_v1_chr1_-_31230697 NM_006762	-21921	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	-21979	-	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	-56179	-	TSC_hg19_v1_chr1_-_31345363 AL049426	92787	-	AB385258 AF248634 NM_014654 TSC_hg19_v1_chr1_-_31381606	128937	-	TSC_hg19_v1_chr1_-_31538543 BC013398 D43951 AK291779 AK300457 AF315592 AK096476 AK222605	285906	-	NM_006762|LAPTM5|7805|lysosomal protein transmembrane 5##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##AL049426|SDC3|9672|syndecan 3##AF248634|SDC3|9672|syndecan 3##NM_014654|SDC3|9672|syndecan 3##BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)##D43951|PUM1|9698|pumilio homolog 1 (Drosophila)##AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)##AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)##AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)##AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)##AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)	0.999877	CTCF.p2:8:1.000
chr19	19285977	19286088	reg1001496.p2	14.870	+	TSC_hg19_v1_chr19_-_19281094 NM_001145785	-4939	-	TSC_hg19_v1_chr19_-_19281067 AK057210	-4965	-	TSC_hg19_v1_chr19_-_19249268 BC005210 AK096964	-36757	-	TSC_hg19_v1_chr19_-_19302962 X68502 EU831418 EU831443 EU831511 EU831535 X63380 BC064537 BC000489 BC004449 BC010178 BC010931 AK301086 AK316328 BC157868 BC171869	16932	-	NM_003721 NM_134440 BC114558 BC114563 AF094760	17019	+	BC157837 BC171829 BC073957 NM_001145783 NM_001145784 NM_005919	17278	-	NM_001145785|MEF2B|100271849|myocyte enhancer factor 2B##AK057210|MEF2B|100271849|myocyte enhancer factor 2B##BC005210|TMEM161A|54929|transmembrane protein 161A##AK096964|TMEM161A|54929|transmembrane protein 161A##X68502|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##EU831418|MEF2BNB|729991|MEF2B neighbor##EU831443|MEF2BNB|729991|MEF2B neighbor##EU831511|MEF2BNB|729991|MEF2B neighbor##EU831535|MEF2BNB|729991|MEF2B neighbor##X63380|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##BC064537|MEF2BNB|729991|MEF2B neighbor##BC000489|MEF2BNB|729991|MEF2B neighbor##BC004449|MEF2BNB|729991|MEF2B neighbor##BC010178|MEF2BNB|729991|MEF2B neighbor##BC010931|MEF2BNB|729991|MEF2B neighbor##AK301086|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##AK316328|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##BC157868|MEF2BNB|729991|MEF2B neighbor##BC171869|MEF2BNB|729991|MEF2B neighbor##NM_003721|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##NM_134440|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##BC114558|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##BC114563|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##AF094760|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##BC157837|MEF2BNB|729991|MEF2B neighbor##BC171829|MEF2BNB|729991|MEF2B neighbor##BC073957|MEF2BNB|729991|MEF2B neighbor##NM_001145783|MEF2BNB|729991|MEF2B neighbor##NM_001145784|MEF2BNB|729991|MEF2B neighbor##NM_005919|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough	1.023519	CTCF.p2:0:0.994
chr20	31683872	31684023	reg1002318.p1	14.870	+	NM_182519	-14630	+	BC113398 BC113400 HQ258440 AF549189 NM_182658	-40765	+	AB463425 AF465767 BC113122 NM_174897	-64496	+	AK291854 BC065726 NM_080574	71973	+	BC041904 NM_001042439 NM_178466 BC066354	121190	+	AF417256 AF417257 BC012549 NM_001243193 NM_016583 NM_130852 AK292778 AY359020 AB024937 AF158745 AF439448 AF172993	139865	+	NM_182519|BPIFB4|149954|BPI fold containing family B, member 4##BC113398|BPIFB3|359710|BPI fold containing family B, member 3##BC113400|BPIFB3|359710|BPI fold containing family B, member 3##HQ258440|BPIFB3|359710|BPI fold containing family B, member 3##AF549189|BPIFB3|359710|BPI fold containing family B, member 3##NM_182658|BPIFB3|359710|BPI fold containing family B, member 3##AF465767|BPIFB6|128859|BPI fold containing family B, member 6##BC113122|BPIFB6|128859|BPI fold containing family B, member 6##NM_174897|BPIFB6|128859|BPI fold containing family B, member 6##AK291854|BPIFA2|140683|BPI fold containing family A, member 2##BC065726|BPIFA2|140683|BPI fold containing family A, member 2##NM_080574|BPIFA2|140683|BPI fold containing family A, member 2##BC041904|BPIFA3|128861|BPI fold containing family A, member 3##NM_001042439|BPIFA3|128861|BPI fold containing family A, member 3##NM_178466|BPIFA3|128861|BPI fold containing family A, member 3##BC066354|BPIFA3|128861|BPI fold containing family A, member 3##AF417256|BPIFA1|51297|BPI fold containing family A, member 1##AF417257|BPIFA1|51297|BPI fold containing family A, member 1##BC012549|BPIFA1|51297|BPI fold containing family A, member 1##NM_001243193|BPIFA1|51297|BPI fold containing family A, member 1##NM_016583|BPIFA1|51297|BPI fold containing family A, member 1##NM_130852|BPIFA1|51297|BPI fold containing family A, member 1##AK292778|BPIFA1|51297|BPI fold containing family A, member 1##AY359020|BPIFA1|51297|BPI fold containing family A, member 1##AB024937|BPIFA1|51297|BPI fold containing family A, member 1##AF158745|BPIFA1|51297|BPI fold containing family A, member 1##AF439448|BPIFA1|51297|BPI fold containing family A, member 1##AF172993|BPIFA1|51297|BPI fold containing family A, member 1	1.079765	CTCF.p2:-28:0.806	CTCF.p2:40:0.273
chr1	5570073	5570191	reg1003661.p1	14.868	+	AY282806 NM_001042478 NM_018836	-855028	+	TSC_hg19_v1_chr1_+_4714668 AF175409	-855403	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-1753287	-	NM_001199861	482225	+	TSC_hg19_v1_chr1_-_6052456 AY118228	482313	-	TSC_hg19_v1_chr1_-_6052507 AK124074 AK314326 AF537130 BC040520 NM_015102	482377	-	AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##AF175409|AJAP1|55966|adherens junctions associated protein 1##BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AY118228|NPHP4|261734|nephronophthisis 4##AK124074|NPHP4|261734|nephronophthisis 4##AK314326|NPHP4|261734|nephronophthisis 4##AF537130|NPHP4|261734|nephronophthisis 4##BC040520|NPHP4|261734|nephronophthisis 4##NM_015102|NPHP4|261734|nephronophthisis 4	0.999952	CTCF.p2:-10:1.000
chr6	158642020	158642128	reg1002146.p1	14.868	+	NM_207118 TSC_hg19_v1_chr6_+_158589381 AK055106 BC056906 AJ634743	-52683	+	TSC_hg19_v1_chr6_-_158589295 AK027823 BC060795 NM_032861	-52774	-	BC048335 BC001705 BC028594 BX648104 TSC_hg19_v1_chr6_-_158589279	-52834	-	AB037818 AF219946 AF288480 BC152476 NM_001007466 NM_020245 AK311671	91623	+	AK304056 TSC_hg19_v1_chr6_+_158734584	92456	+	TSC_hg19_v1_chr6_+_158734935 AF087973	92845	+	NM_207118|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AK055106|GTF2H5|404672|general transcription factor IIH, polypeptide 5##BC056906|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AJ634743|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AK027823|SERAC1|84947|serine active site containing 1##BC060795|SERAC1|84947|serine active site containing 1##NM_032861|SERAC1|84947|serine active site containing 1##BC048335|SERAC1|84947|serine active site containing 1##BC001705|SERAC1|84947|serine active site containing 1##BC028594|SERAC1|84947|serine active site containing 1##BX648104|SERAC1|84947|serine active site containing 1##AB037818|TULP4|56995|tubby like protein 4##AF219946|TULP4|56995|tubby like protein 4##AF288480|TULP4|56995|tubby like protein 4##BC152476|TULP4|56995|tubby like protein 4##NM_001007466|TULP4|56995|tubby like protein 4##NM_020245|TULP4|56995|tubby like protein 4##AK304056|TULP4|56995|tubby like protein 4	0.999695	CTCF.p2:6:1.000
chr6	10510875	10511006	reg1002737.p1	14.867	+	AK296737 NM_001042425	-91149	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	-95472	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	-95665	-	AK307373 NM_145649 AK291767 AK310216 AL832714	10668	+	NM_001491	45008	+	AK313426 BX647668 NM_145655 BX647576 AL832719 BC130524	75074	+	AK296737|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001042425|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##AK307373|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145649|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK291767|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK310216|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832714|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK313426|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647668|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145655|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647576|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832719|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BC130524|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	0.019381	
chr3	9109159	9109270	reg1002392.p1	14.865	+	AB528316 DQ891197 DQ894380 TSC_hg19_v1_chr3_-_9005128 AY004333 BC001302 AK222771 AF169796 AK023075 NM_020165	-104084	-	TSC_hg19_v1_chr3_-_8811300 NM_000916	-297930	-	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	-298128	-	AB007871 AB384477 AK094355 AF427144 TSC_hg19_v1_chr3_-_9290871 AF464189	181530	-	TSC_hg19_v1_chr3_-_9291320 NM_001033117 NM_014850 BC140004 AK054831	182104	-	TSC_hg19_v1_chr3_+_9404750 NM_001114092 NM_015453 AK023263 BC001622 AK001680 BC010421	295561	+	DQ891197|RAD18|56852|RAD18 homolog (S. cerevisiae)##DQ894380|RAD18|56852|RAD18 homolog (S. cerevisiae)##AY004333|RAD18|56852|RAD18 homolog (S. cerevisiae)##BC001302|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK222771|RAD18|56852|RAD18 homolog (S. cerevisiae)##AF169796|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK023075|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_020165|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_000916|OXTR|5021|oxytocin receptor##X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor##AB007871|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK094355|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF427144|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF464189|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_001114092|THUMPD3|25917|THUMP domain containing 3##NM_015453|THUMPD3|25917|THUMP domain containing 3##AK023263|THUMPD3|25917|THUMP domain containing 3##BC001622|THUMPD3|25917|THUMP domain containing 3##AK001680|THUMPD3|25917|THUMP domain containing 3##BC010421|THUMPD3|25917|THUMP domain containing 3	0.821608	CTCF.p2:15:0.822
chr15	69076155	69076261	reg1002363.p1	14.862	+	AK289678 NM_001190457	-151882	+	NM_001190456	-167330	+	TSC_hg19_v1_chr15_+_68871402 NM_006091	-204865	+	AB463390 AY349171 BC106719 BC125143 BT007436 DQ893294 DQ896729 U60823 TSC_hg19_v1_chr15_-_69113208 U73477 X75090 AK223280	36941	-	TSC_hg19_v1_chr15_-_69113235 BC007200 BC000608 AF025684 AK312703	37019	-	TSC_hg19_v1_chr15_-_69113264 NM_006305	37052	-	AK289678|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190457|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##AY349171|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC106719|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC125143|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BT007436|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ893294|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ896729|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U60823|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U73477|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##X75090|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK223280|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC007200|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC000608|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AF025684|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK312703|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##NM_006305|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	0.955031	CTCF.p2:5:0.955
chr14	101317605	101317713	reg1002320.p1	14.861	+	AK092707 TSC_hg19_v1_chr14_+_101300861	-16824	+	AF052114 TSC_hg19_v1_chr14_+_101295525	-22192	+	TSC_hg19_v1_chr14_+_101292487 BX161432	-25174	+	BC150617 NM_001134888	33524	-	BX161470 NM_001362 S79854 TSC_hg19_v1_chr14_+_102027831 AK292310 BC017717	710104	+	NM_001161725 NM_001161726 TSC_hg19_v1_chr14_+_102228166 AL834350 BC051442 AK131391 AK302470	910527	+	AK092707|MEG3|55384|maternally expressed 3 (non-protein coding)##AF052114|MEG3|55384|maternally expressed 3 (non-protein coding)##BC150617|RTL1|388015|retrotransposon-like 1##NM_001134888|RTL1|388015|retrotransposon-like 1##BX161470|DIO3|1735|deiodinase, iodothyronine, type III##NM_001362|DIO3|1735|deiodinase, iodothyronine, type III##S79854|DIO3|1735|deiodinase, iodothyronine, type III##BC017717|DIO3|1735|deiodinase, iodothyronine, type III##NM_001161725|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_001161726|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AL834350|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC051442|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK131391|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK302470|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	0.999829	CTCF.p2:0:1.000
chr15	55940692	55940832	reg1002772.p1	14.860	+	AF457207 NM_015617	-59713	-	EF625686 TSC_hg19_v1_chr15_-_55880544	-60230	-	AF337549 NM_001033559 NM_001033560 NM_130810	-140331	-	AY630258 NM_173814 TSC_hg19_v1_chr15_-_56035276	94464	-	BC136605 BC144284 BC144285 AL832063 NM_198400	268554	-	TSC_hg19_v1_chr15_-_56285776 BC035707 AK304394 AY550969 BC152452 BC152562 D42055 NM_006154	345033	-	AF457207|PYGO1|26108|pygopus homolog 1 (Drosophila)##NM_015617|PYGO1|26108|pygopus homolog 1 (Drosophila)##EF625686|PYGO1|26108|pygopus homolog 1 (Drosophila)##AF337549|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001033559|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001033560|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_130810|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##AY630258|PRTG|283659|protogenin##NM_173814|PRTG|283659|protogenin##BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	0.121152	
chr14	89506817	89506948	reg1003039.p1	14.857	+	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-215889	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-247672	-	NM_207662 BC027607 AF474376	-446129	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	371894	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	376528	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	578713	-	AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3	0.954428	CTCF.p2:-18:0.954
chr13	52371966	52372100	reg1003314.p1	14.854	+	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-213298	+	TSC_hg19_v1_chr13_+_52158639 BC014004	-213392	+	AK309815 TSC_hg19_v1_chr13_+_52158630	-213400	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	6242	-	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	64161	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	213517	-	AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##BC014004|WDFY2|115825|WD repeat and FYVE domain containing 2##AK309815|WDFY2|115825|WD repeat and FYVE domain containing 2##BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide	0.991648	CTCF.p2:12:0.992
chr1	214434974	214435103	reg1003067.p1	14.853	+	BC024201 NM_002763	-273179	+	AK298182 TSC_hg19_v1_chr1_+_214161296 U44060	-273749	+	TSC_hg19_v1_chr1_+_213224716 AB070706 EF491805	-1210278	+	TSC_hg19_v1_chr1_+_214454550 BC068511 BC049367 BC094747 BC057793 NM_020197 AF226053 BC098133 BC098276 BC098305 BC098335 BC028104 AK313868 AB590916 BC039890	19399	+	X82676 TSC_hg19_v1_chr1_-_214724620 BC017300 AK090596	289569	-	TSC_hg19_v1_chr1_-_214724946 AK298120 BX538306 AK291641	289861	-	BC024201|PROX1|5629|prospero homeobox 1##NM_002763|PROX1|5629|prospero homeobox 1##AK298182|PROX1|5629|prospero homeobox 1##U44060|PROX1|5629|prospero homeobox 1##AB070706|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC068511|SMYD2|56950|SET and MYND domain containing 2##BC049367|SMYD2|56950|SET and MYND domain containing 2##BC094747|SMYD2|56950|SET and MYND domain containing 2##BC057793|SMYD2|56950|SET and MYND domain containing 2##NM_020197|SMYD2|56950|SET and MYND domain containing 2##AF226053|SMYD2|56950|SET and MYND domain containing 2##BC098133|SMYD2|56950|SET and MYND domain containing 2##BC098276|SMYD2|56950|SET and MYND domain containing 2##BC098305|SMYD2|56950|SET and MYND domain containing 2##BC098335|SMYD2|56950|SET and MYND domain containing 2##BC028104|SMYD2|56950|SET and MYND domain containing 2##AK313868|SMYD2|56950|SET and MYND domain containing 2##BC039890|SMYD2|56950|SET and MYND domain containing 2##X82676|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##BC017300|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK090596|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK298120|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK291641|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14	0.997616	CTCF.p2:-4:0.987
chr17	76285999	76286129	reg1002367.p1	14.852	+	BC042066 NM_001204210 NM_001204211 NM_001204212 BC148207	-58601	+	TSC_hg19_v1_chr17_+_76210353 AK223428 BC000784 BC034148 AY927772 BC002388 BC008718 HM625836 AB028869 AF077350 AK311917 BC065497 AB590059 AM393128 AB154416 AY830084 CR541740 DQ227257 DQ310375 DQ310376 DQ310377 DQ310378 DQ310379 DQ508249 DQ508245 DQ508246 DQ508247 DQ508248	-75667	+	NM_001012270 NM_001012271 NM_001168 TSC_hg19_v1_chr17_+_76210320 AK301793	-75765	+	TSC_hg19_v1_chr17_-_76356159 AK309756 AK314212 BC060858 NM_003955	70093	-	TSC_hg19_v1_chr17_+_76374729 AK316147 AK307874 AK296882 AK024529 AK225030 AK316405 BC108732 NM_024419 BC035662 AK297156 BC008903 BC015570 BC025951	88666	+	NM_173628	287411	-	BC042066|TMEM235|283999|transmembrane protein 235##NM_001204210|TMEM235|283999|transmembrane protein 235##NM_001204211|TMEM235|283999|transmembrane protein 235##NM_001204212|TMEM235|283999|transmembrane protein 235##BC148207|TMEM235|283999|transmembrane protein 235##AK223428|BIRC5|332|baculoviral IAP repeat containing 5##BC000784|BIRC5|332|baculoviral IAP repeat containing 5##BC034148|BIRC5|332|baculoviral IAP repeat containing 5##AY927772|BIRC5|332|baculoviral IAP repeat containing 5##BC008718|BIRC5|332|baculoviral IAP repeat containing 5##HM625836|BIRC5|332|baculoviral IAP repeat containing 5##AB028869|BIRC5|332|baculoviral IAP repeat containing 5##AF077350|BIRC5|332|baculoviral IAP repeat containing 5##AK311917|BIRC5|332|baculoviral IAP repeat containing 5##BC065497|BIRC5|332|baculoviral IAP repeat containing 5##AM393128|BIRC5|332|baculoviral IAP repeat containing 5##AB154416|BIRC5|332|baculoviral IAP repeat containing 5##AY830084|BIRC5|332|baculoviral IAP repeat containing 5##CR541740|BIRC5|332|baculoviral IAP repeat containing 5##DQ227257|BIRC5|332|baculoviral IAP repeat containing 5##DQ310375|BIRC5|332|baculoviral IAP repeat containing 5##DQ310376|BIRC5|332|baculoviral IAP repeat containing 5##DQ310377|BIRC5|332|baculoviral IAP repeat containing 5##DQ310378|BIRC5|332|baculoviral IAP repeat containing 5##DQ310379|BIRC5|332|baculoviral IAP repeat containing 5##DQ508249|BIRC5|332|baculoviral IAP repeat containing 5##DQ508245|BIRC5|332|baculoviral IAP repeat containing 5##DQ508246|BIRC5|332|baculoviral IAP repeat containing 5##DQ508247|BIRC5|332|baculoviral IAP repeat containing 5##DQ508248|BIRC5|332|baculoviral IAP repeat containing 5##NM_001012270|BIRC5|332|baculoviral IAP repeat containing 5##NM_001012271|BIRC5|332|baculoviral IAP repeat containing 5##NM_001168|BIRC5|332|baculoviral IAP repeat containing 5##AK301793|BIRC5|332|baculoviral IAP repeat containing 5##AK309756|SOCS3|9021|suppressor of cytokine signaling 3##AK314212|SOCS3|9021|suppressor of cytokine signaling 3##BC060858|SOCS3|9021|suppressor of cytokine signaling 3##NM_003955|SOCS3|9021|suppressor of cytokine signaling 3##AK316147|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK307874|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK296882|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK024529|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK225030|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK316405|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC108732|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_024419|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC035662|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK297156|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC008903|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC015570|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC025951|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17	0.434173	CTCF.p2:-21:0.434
chr15	90441992	90442108	reg1002746.p1	14.851	+	NM_005829	-4434	-	TSC_hg19_v1_chr15_-_90437227 DQ892982 DQ896230 BC002785 AL110108 BC007773 AK222698 AK294712 X99459 BC010020 AK312467	-4833	-	TSC_hg19_v1_chr15_-_90358085 AB209918 NM_001150 AK298242	-83978	-	AK093274 AX748027 CU691000 TSC_hg19_v1_chr15_-_90456145 AK000495 BC053602 NM_001199058 NM_182616	14055	-	TSC_hg19_v1_chr15_+_90544707 BC020301 AK094712 NM_198526	102639	+	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	203612	-	NM_005829|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ892982|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ896230|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC002785|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AL110108|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC007773|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK222698|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK294712|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##X99459|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC010020|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK312467|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AB209918|ANPEP|290|alanyl (membrane) aminopeptidase##NM_001150|ANPEP|290|alanyl (membrane) aminopeptidase##AK298242|ANPEP|290|alanyl (membrane) aminopeptidase##AK093274|C15orf38|348110|chromosome 15 open reading frame 38##AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##BC053602|C15orf38|348110|chromosome 15 open reading frame 38##NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##NM_182616|C15orf38|348110|chromosome 15 open reading frame 38##BC020301|ZNF710|374655|zinc finger protein 710##AK094712|ZNF710|374655|zinc finger protein 710##NM_198526|ZNF710|374655|zinc finger protein 710##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial	0.0	
chr5	55566494	55566631	reg1002311.p4	14.851	+	AK123389 NM_024669	-37377	-	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-275799	-	NM_001242636 NM_001242639	-417413	+	NM_005921	544337	+	TSC_hg19_v1_chr5_+_56111375 AK307828	544802	+	TSC_hg19_v1_chr5_+_56111395 AF042838	544856	+	AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.104436	
chr9	42856980	42857112	reg1003348.p1	14.848	+	NM_001099279 NM_199244	-139813	+	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	-488688	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-902132	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	276441	-	NM_001145196	773683	-	TSC_hg19_v1_chr9_+_43684876 NM_001201380	827797	+	NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B	0.92769	CTCF.p2:7:0.928
chr16	48190761	48190895	reg1003361.p1	14.847	+	AY196326 AY040220 NM_033226	-10208	-	TSC_hg19_v1_chr16_+_47495241 X84908 CR936710 BC033657 AK309226	-695589	+	TSC_hg19_v1_chr16_+_47495206 NM_000293 NM_001031835 AK298588	-695640	+	AY040219 NM_033151	75353	-	AF367202 AF411579 NM_032583 NM_145186	78259	-	TSC_hg19_v1_chr16_+_48278210 AJ548761 NM_031490	87366	+	AY196326|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040220|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##NM_033226|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##X84908|PHKB|5257|phosphorylase kinase, beta##CR936710|PHKB|5257|phosphorylase kinase, beta##BC033657|PHKB|5257|phosphorylase kinase, beta##AK309226|PHKB|5257|phosphorylase kinase, beta##NM_000293|PHKB|5257|phosphorylase kinase, beta##NM_001031835|PHKB|5257|phosphorylase kinase, beta##AY040219|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_033151|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF367202|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF411579|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_032583|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_145186|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AJ548761|LONP2|83752|lon peptidase 2, peroxisomal##NM_031490|LONP2|83752|lon peptidase 2, peroxisomal	0.999712	CTCF.p2:3:1.000
chr21	37400869	37401010	reg1002316.p2	14.847	+	AK310646 TSC_hg19_v1_chr21_-_36421641 D43969	-979304	-	TSC_hg19_v1_chr21_-_36421598 NM_001754	-979336	-	TSC_hg19_v1_chr21_-_36421585 AK310587 D89788 D89789 D89790	-979358	-	AK095215 BC002898 TSC_hg19_v1_chr21_-_37432613 AB004853 NM_001007259 AF391112 AK001660	31681	-	BC036556 TSC_hg19_v1_chr21_-_37432809 AK300009 NM_017438	31877	-	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	41314	+	D43969|RUNX1|861|runt-related transcription factor 1##NM_001754|RUNX1|861|runt-related transcription factor 1##AK310587|RUNX1|861|runt-related transcription factor 1##D89788|RUNX1|861|runt-related transcription factor 1##D89789|RUNX1|861|runt-related transcription factor 1##D89790|RUNX1|861|runt-related transcription factor 1##AK095215|SETD4|54093|SET domain containing 4##BC002898|SETD4|54093|SET domain containing 4##AB004853|SETD4|54093|SET domain containing 4##NM_001007259|SETD4|54093|SET domain containing 4##AF391112|SETD4|54093|SET domain containing 4##AK001660|SETD4|54093|SET domain containing 4##BC036556|SETD4|54093|SET domain containing 4##AK300009|SETD4|54093|SET domain containing 4##NM_017438|SETD4|54093|SET domain containing 4##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1	0.960341	CTCF.p2:8:0.960
chr7	2749442	2749567	reg1002400.p1	14.845	+	AK289723 AB075830 BC146753 NM_133463	-30346	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-77801	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	-77901	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	134304	-	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	333958	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	591495	+	AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1	0.657207	CTCF.p2:11:0.657
chr14	67893973	67894096	reg1002935.p1	14.844	+	TSC_hg19_v1_chr14_-_67878872 BC001226	-15163	-	BC008056 AB528314 DQ891238 DQ894423 TSC_hg19_v1_chr14_-_67878843 AF228603 NM_016445	-15223	-	AB587562 DQ892151 DQ895347 TSC_hg19_v1_chr14_+_67831578	-62503	+	NM_182526 TSC_hg19_v1_chr14_-_67982162 AK090706 AX746582	88076	-	AK307428 NM_020715 TSC_hg19_v1_chr14_+_68000028 AB033026 BC146787	105939	+	BT006804 CU678574 BC071849 BC004100 L19783 AK314108 AK293584 NM_004569	172933	-	BC001226|PLEK2|26499|pleckstrin 2##BC008056|PLEK2|26499|pleckstrin 2##DQ891238|PLEK2|26499|pleckstrin 2##DQ894423|PLEK2|26499|pleckstrin 2##AF228603|PLEK2|26499|pleckstrin 2##NM_016445|PLEK2|26499|pleckstrin 2##DQ892151|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##DQ895347|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##NM_182526|TMEM229B|161145|transmembrane protein 229B##AK090706|TMEM229B|161145|transmembrane protein 229B##AK307428|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##NM_020715|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##AB033026|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##BC146787|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##BT006804|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC071849|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC004100|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##L19783|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##AK314108|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##NM_004569|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H	0.971116	CTCF.p2:-12:0.971
chr11	68214801	68214928	reg1003933.p1	14.843	+	AF088027 TSC_hg19_v1_chr11_+_68115450	-99428	+	TSC_hg19_v1_chr11_+_68080058 AB017498 NM_002335 AF077820 AF064548 BC150595 BC098397	-134775	+	TSC_hg19_v1_chr11_-_68039453 NM_022338	-175406	-	TSC_hg19_v1_chr11_+_68228219 NM_001164160 NM_001164161 NM_001164162 NM_001164163 NM_001164164 NM_018312 BC070121 AK298180 AK303315 AK315136 CR936718 CR749815 CR933658 AB046778	13345	+	AK001920 TSC_hg19_v1_chr11_+_68367929	153012	+	TSC_hg19_v1_chr11_+_68451978 NM_015973	237119	+	AF088027|LRP5|4041|low density lipoprotein receptor-related protein 5##AB017498|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_002335|LRP5|4041|low density lipoprotein receptor-related protein 5##AF077820|LRP5|4041|low density lipoprotein receptor-related protein 5##AF064548|LRP5|4041|low density lipoprotein receptor-related protein 5##BC150595|LRP5|4041|low density lipoprotein receptor-related protein 5##BC098397|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_022338|C11orf24|53838|chromosome 11 open reading frame 24##NM_001164160|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164161|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164162|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164163|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164164|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_018312|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##BC070121|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK298180|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK303315|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK315136|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR936718|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR749815|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR933658|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AB046778|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK001920|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_015973|GAL|51083|galanin prepropeptide	0.99892	CTCF.p2:0:0.999
chr6	72093737	72093864	reg1002432.p1	14.843	+	TSC_hg19_v1_chr6_+_71998514 BC110999	-95276	+	TSC_hg19_v1_chr6_+_71998513 BC018688	-95290	+	NM_024576 TSC_hg19_v1_chr6_+_71998479	-95314	+	AK023251 TSC_hg19_v1_chr6_-_72130545	36700	-	AB045726 AB051866 TSC_hg19_v1_chr6_+_72596447	502628	+	BC151853 AB002338 BC152435 NM_014989 TSC_hg19_v1_chr6_+_72596658	502853	+	BC110999|OGFRL1|79627|opioid growth factor receptor-like 1##BC018688|OGFRL1|79627|opioid growth factor receptor-like 1##NM_024576|OGFRL1|79627|opioid growth factor receptor-like 1##AK023251|LINC00472|79940|long intergenic non-protein coding RNA 472##AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC151853|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB002338|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC152435|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_014989|RIMS1|22999|regulating synaptic membrane exocytosis 1	0.968974	CTCF.p2:-17:0.969
chr16	58370686	58370825	reg1002352.p1	14.842	+	AK302175 AK058068 BC057843 NM_001080492	-41841	-	TSC_hg19_v1_chr16_+_58283871 AK299066 NM_001142302 NM_014157 AK314300 AL136785 BC126445 BC126447 AF161550 AB462987 AM392831 CR533506 HQ258203	-86887	+	DQ893025 DQ896269 AB463465 BC008812 NM_001896	-139044	-	NM_001126129 NM_001126130 NM_022770 TSC_hg19_v1_chr16_+_58426340 AK315622 AK023974 BC014437 BC005879 CR457283	55646	+	NM_020465 TSC_hg19_v1_chr16_+_58497607	126825	+	TSC_hg19_v1_chr16_+_58497628 AB021172	126883	+	AK302175|PRSS54|221191|protease, serine, 54##AK058068|PRSS54|221191|protease, serine, 54##BC057843|PRSS54|221191|protease, serine, 54##NM_001080492|PRSS54|221191|protease, serine, 54##AK299066|CCDC113|29070|coiled-coil domain containing 113##NM_001142302|CCDC113|29070|coiled-coil domain containing 113##NM_014157|CCDC113|29070|coiled-coil domain containing 113##AK314300|CCDC113|29070|coiled-coil domain containing 113##AL136785|CCDC113|29070|coiled-coil domain containing 113##BC126445|CCDC113|29070|coiled-coil domain containing 113##BC126447|CCDC113|29070|coiled-coil domain containing 113##AF161550|CCDC113|29070|coiled-coil domain containing 113##AM392831|CCDC113|29070|coiled-coil domain containing 113##CR533506|CCDC113|29070|coiled-coil domain containing 113##HQ258203|CCDC113|29070|coiled-coil domain containing 113##DQ893025|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##DQ896269|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##BC008812|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##NM_001896|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##NM_001126129|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##NM_001126130|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##NM_022770|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##AK315622|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##AK023974|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##BC014437|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##BC005879|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##CR457283|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##NM_020465|NDRG4|65009|NDRG family member 4##AB021172|NDRG4|65009|NDRG family member 4	0.978102	CTCF.p2:-7:0.978
chr17	884376	884513	reg1003417.p1	14.842	+	TSC_hg19_v1_chr17_-_882986 AB590045 NM_022463	-1444	-	BC009327 AK302073 NM_001205319	-117126	-	BC011550 TSC_hg19_v1_chr17_+_685611 BC050614 AK225128 AB590841 CU679954 CU690740	-198830	+	TSC_hg19_v1_chr17_+_900368 BC002324 NM_013337 AK000830 AK225453 AF155330	15911	+	TSC_hg19_v1_chr17_-_982210 AK299909	97781	-	AK295191 TSC_hg19_v1_chr17_-_1012323 NM_001092 BC036807	127865	-	NM_022463|NXN|64359|nucleoredoxin##BC009327|NXN|64359|nucleoredoxin##AK302073|NXN|64359|nucleoredoxin##NM_001205319|NXN|64359|nucleoredoxin##BC011550|RNMTL1|55178|RNA methyltransferase like 1##BC050614|RNMTL1|55178|RNA methyltransferase like 1##AK225128|RNMTL1|55178|RNA methyltransferase like 1##BC002324|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##NM_013337|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK000830|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK225453|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AF155330|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK299909|ABR|29|active BCR-related gene##AK295191|ABR|29|active BCR-related gene##NM_001092|ABR|29|active BCR-related gene##BC036807|ABR|29|active BCR-related gene	0.349006	CTCF.p2:18:0.349
chr7	121733124	121733261	reg1003830.p1	14.842	+	TSC_hg19_v1_chr7_+_121513214 U88967	-219971	+	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	-220031	+	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	-696778	-	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	51097	-	AY726588 BC127714 BC127715 NM_001024613 NM_001160264 BC136684 BC144367 AK300742	211397	-	BC022038 AF447589 NM_139175 AK098524	606005	-	U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase##AY726588|FEZF1|389549|FEZ family zinc finger 1##BC127714|FEZF1|389549|FEZ family zinc finger 1##BC127715|FEZF1|389549|FEZ family zinc finger 1##NM_001024613|FEZF1|389549|FEZ family zinc finger 1##NM_001160264|FEZF1|389549|FEZ family zinc finger 1##BC136684|FEZF1|389549|FEZ family zinc finger 1##BC144367|FEZF1|389549|FEZ family zinc finger 1##AK300742|FEZF1|389549|FEZ family zinc finger 1##BC022038|RNF133|168433|ring finger protein 133##AF447589|RNF133|168433|ring finger protein 133##NM_139175|RNF133|168433|ring finger protein 133##AK098524|RNF133|168433|ring finger protein 133	0.991928	CTCF.p2:-5:0.992
chr11	67396809	67396949	reg1001818.p1	14.841	+	BC007619 TSC_hg19_v1_chr11_+_67377037	-19898	+	NM_001166102 NM_007103 TSC_hg19_v1_chr11_+_67374428 AF092131 AF053070 BC008146 AK310537 AK223061 AK293522 AK300726 BC015645 AB590249 CR456739 CU677379 CU678877 DQ893236 DQ896566 AK316122	-22478	+	TSC_hg19_v1_chr11_+_67351285 AY887902 BC010915 BC044846 X15480 U62589 U30897	-45590	+	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	524	-	BC113485 BC113487 AY229977 NM_005995	10148	-	AY032593 AY040761 AY169233 BC008689 NM_080658	21239	-	BC007619|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_001166102|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_007103|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF092131|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF053070|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC008146|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK310537|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK223061|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK293522|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK300726|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC015645|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##CR456739|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ893236|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ896566|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK316122|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC010915|GSTP1|2950|glutathione S-transferase pi 1##BC044846|GSTP1|2950|glutathione S-transferase pi 1##X15480|GSTP1|2950|glutathione S-transferase pi 1##U62589|GSTP1|2950|glutathione S-transferase pi 1##U30897|GSTP1|2950|glutathione S-transferase pi 1##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC113485|TBX10|347853|T-box 10##BC113487|TBX10|347853|T-box 10##AY229977|TBX10|347853|T-box 10##NM_005995|TBX10|347853|T-box 10##AY032593|ACY3|91703|aspartoacylase (aminocyclase) 3##AY040761|ACY3|91703|aspartoacylase (aminocyclase) 3##AY169233|ACY3|91703|aspartoacylase (aminocyclase) 3##BC008689|ACY3|91703|aspartoacylase (aminocyclase) 3##NM_080658|ACY3|91703|aspartoacylase (aminocyclase) 3	0.996141	CTCF.p2:4:0.996
chr19	39220455	39220591	reg1002592.p1	14.841	+	AK023756 TSC_hg19_v1_chr19_+_39155341	-65248	+	TSC_hg19_v1_chr19_+_39138349 BC005033 GU987085 AB590161 CU678876 DQ431186 DQ893439 DQ896777 D89980	-82152	+	TSC_hg19_v1_chr19_+_39138326 AK299955 AK304554 AK309361 AK309364 BX647098	-82202	+	TSC_hg19_v1_chr19_-_39227632 AK125713	7099	-	AK127398 NM_144691	14590	-	U06643 BC061588 BC073743 L07769 NM_002307	43627	-	BC005033|ACTN4|81|actinin, alpha 4##GU987085|ACTN4|81|actinin, alpha 4##DQ431186|ACTN4|81|actinin, alpha 4##DQ893439|ACTN4|81|actinin, alpha 4##DQ896777|ACTN4|81|actinin, alpha 4##D89980|ACTN4|81|actinin, alpha 4##AK299955|ACTN4|81|actinin, alpha 4##AK304554|ACTN4|81|actinin, alpha 4##AK309361|ACTN4|81|actinin, alpha 4##AK309364|ACTN4|81|actinin, alpha 4##BX647098|ACTN4|81|actinin, alpha 4##AK125713|CAPN12|147968|calpain 12##AK127398|CAPN12|147968|calpain 12##NM_144691|CAPN12|147968|calpain 12##U06643|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC061588|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC073743|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##L07769|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##NM_002307|LGALS7|3963|lectin, galactoside-binding, soluble, 7	1.640368	CTCF.p2:-12:1.000	CTCF.p2:71:0.641
chr20	19976032	19976170	reg1002195.p2	14.841	+	TSC_hg19_v1_chr20_+_19955789 M37190	-20242	+	TSC_hg19_v1_chr20_+_19915762 BC034698 AL136924	-60352	+	BC128065 NM_018993 TSC_hg19_v1_chr20_+_19870217 AB060339	-105874	+	TSC_hg19_v1_chr20_+_19997934 NM_016100 NM_181528	21832	+	TSC_hg19_v1_chr20_+_19997975 AF085355 AK311819 BC008446	21868	+	TSC_hg19_v1_chr20_+_19998005 AL136641 BC005181	21898	+	M37190|RIN2|54453|Ras and Rab interactor 2##BC034698|RIN2|54453|Ras and Rab interactor 2##AL136924|RIN2|54453|Ras and Rab interactor 2##BC128065|RIN2|54453|Ras and Rab interactor 2##NM_018993|RIN2|54453|Ras and Rab interactor 2##AB060339|RIN2|54453|Ras and Rab interactor 2##NM_016100|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##NM_181528|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##AF085355|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##AK311819|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##BC008446|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##AL136641|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##BC005181|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit	0.898315	CTCF.p2:5:0.898
chr17	75082699	75082815	reg1003149.p1	14.840	+	AB114297 NM_198955 BC144361	-213997	+	TSC_hg19_v1_chr17_+_74864556 AK057861 AB235153 BC041577 NM_001199172 NM_144677 BC062354	-218091	+	TSC_hg19_v1_chr17_+_74734111 AK308058 AF015184 AK000233	-348604	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	2040	+	NM_001204410 FM995496 AF130050	2511	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	54277	+	AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AK308058|MFSD11|79157|major facilitator superfamily domain containing 11##AF015184|MFSD11|79157|major facilitator superfamily domain containing 11##AK000233|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001204410|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995496|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AF130050|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)	0.998404	CTCF.p2:8:0.998
chr20	60712012	60712118	reg1002793.p1	14.838	+	TSC_hg19_v1_chr20_+_60697578 CU691202	-14421	+	TSC_hg19_v1_chr20_+_60697530 BC057387 NM_144703 BC035702	-14551	+	U75308 NM_003185 Y11354 TSC_hg19_v1_chr20_-_60640882	-71186	-	BT007165 AB528335 DQ890589 DQ893754 AF022815 TSC_hg19_v1_chr20_-_60718388	6309	-	TSC_hg19_v1_chr20_-_60718410 AK312025 BC004427	6357	-	TSC_hg19_v1_chr20_-_60718451 BC014999 AF054185 BC001895 NM_002792	6409	-	BC057387|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##NM_144703|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##BC035702|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##U75308|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##NM_003185|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##Y11354|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##BT007165|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##DQ890589|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##DQ893754|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##AF022815|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##AK312025|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##BC004427|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##BC014999|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##AF054185|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##BC001895|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##NM_002792|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7	0.988866	CTCF.p2:1:0.989
chr17	42408790	42408936	reg1003835.p1	14.837	+	TSC_hg19_v1_chr17_-_42402202 NM_001143780 NM_016016	-6656	-	TSC_hg19_v1_chr17_-_42402172 BC096819 BC009330 AK026060 AL133584 BC001398 AK289357 AK295478 AK301139	-6697	-	AL133657 NM_001144825 NM_001144826 NM_006695 TSC_hg19_v1_chr17_+_42385950 AB209802 AK226045 BC006194 AK313669 BX537443 AF055026 CR456748 CU675291 U93871	-22873	+	BC000324 NM_002087 TSC_hg19_v1_chr17_+_42422623	13693	+	TSC_hg19_v1_chr17_+_42422640 AF055008	13774	+	TSC_hg19_v1_chr17_+_42422669 AK000607 AK222522 AK296090 X62320 AK303830	13813	+	NM_001143780|SLC25A39|51629|solute carrier family 25, member 39##NM_016016|SLC25A39|51629|solute carrier family 25, member 39##BC096819|SLC25A39|51629|solute carrier family 25, member 39##BC009330|SLC25A39|51629|solute carrier family 25, member 39##AK026060|SLC25A39|51629|solute carrier family 25, member 39##AL133584|SLC25A39|51629|solute carrier family 25, member 39##BC001398|SLC25A39|51629|solute carrier family 25, member 39##AK289357|SLC25A39|51629|solute carrier family 25, member 39##AK295478|SLC25A39|51629|solute carrier family 25, member 39##AK301139|SLC25A39|51629|solute carrier family 25, member 39##AL133657|RUNDC3A|10900|RUN domain containing 3A##NM_001144825|RUNDC3A|10900|RUN domain containing 3A##NM_001144826|RUNDC3A|10900|RUN domain containing 3A##NM_006695|RUNDC3A|10900|RUN domain containing 3A##AB209802|RUNDC3A|10900|RUN domain containing 3A##AK226045|RUNDC3A|10900|RUN domain containing 3A##BC006194|RUNDC3A|10900|RUN domain containing 3A##AK313669|RUNDC3A|10900|RUN domain containing 3A##BX537443|RUNDC3A|10900|RUN domain containing 3A##AF055026|RUNDC3A|10900|RUN domain containing 3A##CR456748|RUNDC3A|10900|RUN domain containing 3A##U93871|RUNDC3A|10900|RUN domain containing 3A##BC000324|GRN|2896|granulin##NM_002087|GRN|2896|granulin##AF055008|GRN|2896|granulin##AK000607|GRN|2896|granulin##AK222522|GRN|2896|granulin##AK296090|GRN|2896|granulin##X62320|GRN|2896|granulin##AK303830|GRN|2896|granulin	0.99811	CTCF.p2:0:0.998
chr18	68101252	68101382	reg1003025.p1	14.837	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-145056	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-145150	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-228379	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	2109458	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	2110413	-	AF448839 NM_138999	2431616	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	1.26411	CTCF.p2:2:1.000	CTCF.p2:39:0.264
chr5	179742814	179742938	reg1003665.p1	14.837	+	TSC_hg19_v1_chr5_-_179719061 NM_001135044 NM_002752 NM_139068 NM_139069 NM_139070	-23800	-	TSC_hg19_v1_chr5_-_179718968 AK289638	-23909	-	TSC_hg19_v1_chr5_-_179636160 NM_175062 BC036802	-106700	-	AB016789 NM_005110 BC000012 TSC_hg19_v1_chr5_-_179780333 AK022507 AK314551	37449	-	TSC_hg19_v1_chr5_+_179921385 NM_015455	178517	+	TSC_hg19_v1_chr5_+_179921452 AB033020 BC152469	178582	+	NM_001135044|MAPK9|5601|mitogen-activated protein kinase 9##NM_002752|MAPK9|5601|mitogen-activated protein kinase 9##NM_139068|MAPK9|5601|mitogen-activated protein kinase 9##NM_139069|MAPK9|5601|mitogen-activated protein kinase 9##NM_139070|MAPK9|5601|mitogen-activated protein kinase 9##AK289638|MAPK9|5601|mitogen-activated protein kinase 9##NM_175062|RASGEF1C|255426|RasGEF domain family, member 1C##BC036802|RASGEF1C|255426|RasGEF domain family, member 1C##AB016789|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##NM_005110|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##BC000012|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##AK022507|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##AK314551|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##NM_015455|CNOT6|57472|CCR4-NOT transcription complex, subunit 6##AB033020|CNOT6|57472|CCR4-NOT transcription complex, subunit 6##BC152469|CNOT6|57472|CCR4-NOT transcription complex, subunit 6	0.984916	CTCF.p2:-1:0.985
chr7	41982763	41982896	reg1002242.p2	14.837	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-240144	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1808220	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1808298	+	NM_000168	293788	-	TSC_hg19_v1_chr7_-_42276797 AK308429	293966	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	968760	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.053992	
chr2	178589520	178589645	reg1001899.p2	14.836	+	AK292395 BC042848 NM_152275	-105897	-	TSC_hg19_v1_chr2_-_178483463 CU692122 AK057530 AK125104 BC048006	-106154	-	TSC_hg19_v1_chr2_-_178417525 AK296828 AK055552 BC033795 NM_152517	-172097	-	AJ251509 NM_001077196	163882	-	AF281865 NM_001077358	197960	-	BC112393 BC114431 AB036704 NM_016953 TSC_hg19_v1_chr2_-_178937505 AK309155	347926	-	AK292395|TTC30A|92104|tetratricopeptide repeat domain 30A##BC042848|TTC30A|92104|tetratricopeptide repeat domain 30A##NM_152275|TTC30A|92104|tetratricopeptide repeat domain 30A##AK057530|TTC30A|92104|tetratricopeptide repeat domain 30A##AK125104|TTC30A|92104|tetratricopeptide repeat domain 30A##BC048006|TTC30A|92104|tetratricopeptide repeat domain 30A##AK296828|TTC30B|150737|tetratricopeptide repeat domain 30B##AK055552|TTC30B|150737|tetratricopeptide repeat domain 30B##BC033795|TTC30B|150737|tetratricopeptide repeat domain 30B##NM_152517|TTC30B|150737|tetratricopeptide repeat domain 30B##AJ251509|PDE11A|50940|phosphodiesterase 11A##NM_001077196|PDE11A|50940|phosphodiesterase 11A##AF281865|PDE11A|50940|phosphodiesterase 11A##NM_001077358|PDE11A|50940|phosphodiesterase 11A##BC112393|PDE11A|50940|phosphodiesterase 11A##BC114431|PDE11A|50940|phosphodiesterase 11A##AB036704|PDE11A|50940|phosphodiesterase 11A##NM_016953|PDE11A|50940|phosphodiesterase 11A	0.97702	CTCF.p2:6:0.977
chr5	54442508	54442641	reg1002729.p1	14.835	+	NM_006144 BC015739 DQ893071 DQ896326 AB528402 CR456968 M18737	-44083	+	AK312074 BC035802 NM_002104 U26174 DQ894093 EU176203 U35237	-122458	+	AB590689 CU680150 AJ973643 X89426 BC011989 NM_001135604 NM_007036 TSC_hg19_v1_chr5_-_54281422 AK300634 AK311817	-161191	-	AK074216 NM_001008397 BC029424 BX537894 BX647770 AK298545 AK307365 AY358715 CU688646	13408	+	CU691502 AB077044 BC136572 AB077043 AB081750 AB086378 BC037547 AK095246 NM_001145734 NM_001170402 NM_152623 TSC_hg19_v1_chr5_-_54469147	26416	-	NM_001190787	80568	-	NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##AK312074|GZMK|3003|granzyme K (granzyme 3; tryptase II)##BC035802|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_002104|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U26174|GZMK|3003|granzyme K (granzyme 3; tryptase II)##DQ894093|GZMK|3003|granzyme K (granzyme 3; tryptase II)##EU176203|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U35237|GZMK|3003|granzyme K (granzyme 3; tryptase II)##AJ973643|ESM1|11082|endothelial cell-specific molecule 1##X89426|ESM1|11082|endothelial cell-specific molecule 1##BC011989|ESM1|11082|endothelial cell-specific molecule 1##NM_001135604|ESM1|11082|endothelial cell-specific molecule 1##NM_007036|ESM1|11082|endothelial cell-specific molecule 1##AK300634|ESM1|11082|endothelial cell-specific molecule 1##AK311817|ESM1|11082|endothelial cell-specific molecule 1##AK074216|GPX8|493869|glutathione peroxidase 8 (putative)##NM_001008397|GPX8|493869|glutathione peroxidase 8 (putative)##BC029424|GPX8|493869|glutathione peroxidase 8 (putative)##BX537894|GPX8|493869|glutathione peroxidase 8 (putative)##BX647770|GPX8|493869|glutathione peroxidase 8 (putative)##AK298545|GPX8|493869|glutathione peroxidase 8 (putative)##AK307365|GPX8|493869|glutathione peroxidase 8 (putative)##AY358715|GPX8|493869|glutathione peroxidase 8 (putative)##AB077044|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##BC136572|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AB077043|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AB081750|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AB086378|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##BC037547|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AK095246|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##NM_001145734|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##NM_001170402|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##NM_152623|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##NM_001190787|IDAS|345643|Idas protein	0.999447	CTCF.p2:10:0.999
chr8	1972309	1972451	reg1003443.p1	14.835	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-19472	+	TSC_hg19_v1_chr8_+_1950340 BC169332	-22028	+	TSC_hg19_v1_chr8_+_1949299 AY762229	-23130	+	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	20822	+	AK128880 TSC_hg19_v1_chr8_-_2585966	613602	-	AY017307 TSC_hg19_v1_chr8_-_4852228	2879845	-	AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##BC169332|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY762229|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1	0.999089	CTCF.p2:-1:0.999
chr2	135761935	135762071	reg1003278.p1	14.833	+	TSC_hg19_v1_chr2_+_135676409 AF048732	-85584	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	-85606	+	AK125008 NM_138326 BC016018 BC107420 AB071418	-165785	+	BC137276 BC137277 BC144555 AY574901 AY574902 AY574903 AY574904 AY574905 NM_001018046 NM_025052	20243	-	NM_001172435 NM_012233 TSC_hg19_v1_chr2_+_135809861 AK022494 BC146809 BC071602 D31886 AB385272 AB449877 BC030992	47913	+	AK095362 BC089429 NM_032143	526783	-	AF048732|CCNT2|905|cyclin T2##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC137276|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##BC137277|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##BC144555|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574901|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574902|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574903|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574904|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574905|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##NM_001018046|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##NM_025052|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##NM_001172435|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##NM_012233|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AK022494|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC146809|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC071602|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##D31886|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AB449877|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC030992|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	1.025523	CTCF.p2:-2:0.989
chr7	36024913	36025026	reg1002483.p1	14.832	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	-184117	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	-184136	+	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	-184259	+	TSC_hg19_v1_chr7_+_36192789 NM_030636	167836	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	167914	+	TSC_hg19_v1_chr7_+_36193025 AB051493	168086	+	DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##NM_030636|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1	0.480362	CTCF.p2:-10:0.480
chr17	62211082	62211220	reg1002393.p1	14.830	+	AF059198 AB209869 TSC_hg19_v1_chr17_-_62207502 NM_001433 AK292403	-3635	-	TSC_hg19_v1_chr17_-_62207401 AB385116 BC130405 BC130407	-3753	-	TSC_hg19_v1_chr17_-_62097985 AK295382 AK309953 NM_001099786 NM_001099787 NM_001099788 NM_001099789	-113169	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	129435	-	TSC_hg19_v1_chr17_-_62340645 BC036672	129496	-	BC040522 NM_018469 TSC_hg19_v1_chr17_-_62340654	129503	-	AF059198|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AB209869|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##NM_001433|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK292403|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130405|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130407|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK295382|ICAM2|3384|intercellular adhesion molecule 2##NM_001099786|ICAM2|3384|intercellular adhesion molecule 2##NM_001099787|ICAM2|3384|intercellular adhesion molecule 2##NM_001099788|ICAM2|3384|intercellular adhesion molecule 2##NM_001099789|ICAM2|3384|intercellular adhesion molecule 2##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2##BC036672|TEX2|55852|testis expressed 2##BC040522|TEX2|55852|testis expressed 2##NM_018469|TEX2|55852|testis expressed 2	0.764304	CTCF.p2:22:0.764
chr2	45182875	45183001	reg1003272.p1	14.829	+	AJ012611 NM_005413 AL162671	-13892	+	NM_024766 TSC_hg19_v1_chr2_+_44589085 BC029359 AK027104 BC053733	-593846	+	AK131463 NM_001171603 NM_001171617	-593967	-	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	53612	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	612190	-	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	655469	-	AJ012611|SIX3|6496|SIX homeobox 3##NM_005413|SIX3|6496|SIX homeobox 3##AL162671|SIX3|6496|SIX homeobox 3##NM_024766|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC029359|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK027104|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC053733|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK131463|PREPL|9581|prolyl endopeptidase-like##NM_001171603|PREPL|9581|prolyl endopeptidase-like##NM_001171617|PREPL|9581|prolyl endopeptidase-like##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1	0.968736	CTCF.p2:9:0.969
chr2	172272684	172272834	reg1002929.p1	14.828	+	AK090779 NM_001136554	-184936	-	TSC_hg19_v1_chr2_-_172017431 AK091975 NM_012290	-255260	-	TSC_hg19_v1_chr2_-_172017240 DQ890904 DQ894057 BC032657 D50927 AK292508 AF162666 AB004885	-255663	-	TSC_hg19_v1_chr2_-_172290501 AK124092 BC025250 AK024046	17767	-	TSC_hg19_v1_chr2_+_172290743 AK307877 NM_001164821 NM_025000	18003	+	TSC_hg19_v1_chr2_+_172290824 CR933646	18052	+	AK090779|TLK1|9874|tousled-like kinase 1##NM_001136554|TLK1|9874|tousled-like kinase 1##AK091975|TLK1|9874|tousled-like kinase 1##NM_012290|TLK1|9874|tousled-like kinase 1##DQ890904|TLK1|9874|tousled-like kinase 1##DQ894057|TLK1|9874|tousled-like kinase 1##BC032657|TLK1|9874|tousled-like kinase 1##D50927|TLK1|9874|tousled-like kinase 1##AK292508|TLK1|9874|tousled-like kinase 1##AF162666|TLK1|9874|tousled-like kinase 1##AB004885|TLK1|9874|tousled-like kinase 1##AK124092|METTL8|79828|methyltransferase like 8##BC025250|METTL8|79828|methyltransferase like 8##AK024046|METTL8|79828|methyltransferase like 8##AK307877|DCAF17|80067|DDB1 and CUL4 associated factor 17##NM_001164821|DCAF17|80067|DDB1 and CUL4 associated factor 17##NM_025000|DCAF17|80067|DDB1 and CUL4 associated factor 17##CR933646|DCAF17|80067|DDB1 and CUL4 associated factor 17	0.987686	CTCF.p2:13:0.988
chr22	35746859	35746978	reg1001835.p1	14.828	+	TSC_hg19_v1_chr22_+_35695886 AK097066 AK297827 AK295918 AK296670 AK314522 AK097926 CR456595 BC005144 BC040006 BC046151 AB463301 CU013195 CU013483 CU692314	-51022	+	TSC_hg19_v1_chr22_+_35695855 NM_001135730 NM_001135732 NM_005488 AK026576 AJ006973 AY358980	-51087	+	AK293694 NM_001135729	-51651	+	CR456505 NM_002133 TSC_hg19_v1_chr22_+_35777085 X06985	30150	+	TSC_hg19_v1_chr22_+_35777088 AK313120 BC001491 M23041 AB528477 BT019785 CR541945 CR541968 CU013103 CU013391 DQ892310 DQ895510 JF323038	30208	+	AF051791 TSC_hg19_v1_chr22_+_35779219	32244	+	AK097066|TOM1|10043|target of myb1 (chicken)##AK297827|TOM1|10043|target of myb1 (chicken)##AK295918|TOM1|10043|target of myb1 (chicken)##AK296670|TOM1|10043|target of myb1 (chicken)##AK314522|TOM1|10043|target of myb1 (chicken)##AK097926|TOM1|10043|target of myb1 (chicken)##CR456595|TOM1|10043|target of myb1 (chicken)##BC040006|TOM1|10043|target of myb1 (chicken)##BC046151|TOM1|10043|target of myb1 (chicken)##CU013195|TOM1|10043|target of myb1 (chicken)##CU013483|TOM1|10043|target of myb1 (chicken)##NM_001135730|TOM1|10043|target of myb1 (chicken)##NM_001135732|TOM1|10043|target of myb1 (chicken)##NM_005488|TOM1|10043|target of myb1 (chicken)##AK026576|TOM1|10043|target of myb1 (chicken)##AJ006973|TOM1|10043|target of myb1 (chicken)##AY358980|TOM1|10043|target of myb1 (chicken)##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)##CR456505|HMOX1|3162|heme oxygenase (decycling) 1##NM_002133|HMOX1|3162|heme oxygenase (decycling) 1##X06985|HMOX1|3162|heme oxygenase (decycling) 1##AK313120|HMOX1|3162|heme oxygenase (decycling) 1##BC001491|HMOX1|3162|heme oxygenase (decycling) 1##M23041|HMOX1|3162|heme oxygenase (decycling) 1##BT019785|HMOX1|3162|heme oxygenase (decycling) 1##CR541945|HMOX1|3162|heme oxygenase (decycling) 1##CR541968|HMOX1|3162|heme oxygenase (decycling) 1##CU013103|HMOX1|3162|heme oxygenase (decycling) 1##CU013391|HMOX1|3162|heme oxygenase (decycling) 1##DQ892310|HMOX1|3162|heme oxygenase (decycling) 1##DQ895510|HMOX1|3162|heme oxygenase (decycling) 1##JF323038|HMOX1|3162|heme oxygenase (decycling) 1##AF051791|HMOX1|3162|heme oxygenase (decycling) 1	0.996915	CTCF.p2:-12:0.997
chr12	52387004	52387128	reg1003212.p1	14.827	+	AK299496 NM_020327	-39903	+	TSC_hg19_v1_chr12_+_52345493 AK299120 L10125 BC000254 AB384957 BT007072 CU674106 EU831986 EU832079 L10126 U14722 Z22536	-41569	+	TSC_hg19_v1_chr12_+_52345437 BC040531 NM_004302 NM_020328	-41621	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	13675	+	AK297526 NM_001202233	29549	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	58150	+	AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB##AK299120|ACVR1B|91|activin A receptor, type IB##L10125|ACVR1B|91|activin A receptor, type IB##BC000254|ACVR1B|91|activin A receptor, type IB##BT007072|ACVR1B|91|activin A receptor, type IB##EU831986|ACVR1B|91|activin A receptor, type IB##EU832079|ACVR1B|91|activin A receptor, type IB##L10126|ACVR1B|91|activin A receptor, type IB##U14722|ACVR1B|91|activin A receptor, type IB##Z22536|ACVR1B|91|activin A receptor, type IB##BC040531|ACVR1B|91|activin A receptor, type IB##NM_004302|ACVR1B|91|activin A receptor, type IB##NM_020328|ACVR1B|91|activin A receptor, type IB##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1	0.860329	CTCF.p2:0:0.860
chr4	36401497	36401633	reg1003324.p1	14.826	+	BC157885 NM_001170700	-115922	+	AK131492 NM_001136536 AK304357 AK316523	-118319	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	-155528	-	NM_001144990	845124	+	NM_001104629 BC037906	1054010	+	AK001879 NM_018302 AK225192	1184304	+	BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_001144990|KIAA1239|57495|KIAA1239##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19	0.975815	CTCF.p2:13:0.976
chr16	85852918	85853028	reg1002067.p1	14.825	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-19638	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-19668	+	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	-19740	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	79813	+	TSC_hg19_v1_chr16_-_86542463 AK091834	689491	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	691183	+	BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1	0.996738	CTCF.p2:-9:0.997
chr2	191237233	191237371	reg1003358.p1	14.824	+	TSC_hg19_v1_chr2_+_191208645 BC106006	-28646	+	TSC_hg19_v1_chr2_+_191208326 AK093560	-28928	+	NM_001128928 NM_002194 TSC_hg19_v1_chr2_+_191208270	-29066	+	TSC_hg19_v1_chr2_+_191273080 AK127176 NM_017694	35761	+	AK098085 TSC_hg19_v1_chr2_+_191301120	63768	+	AK296987 TSC_hg19_v1_chr2_-_191399436	162125	-	BC106006|INPP1|3628|inositol polyphosphate-1-phosphatase##AK093560|INPP1|3628|inositol polyphosphate-1-phosphatase##NM_001128928|INPP1|3628|inositol polyphosphate-1-phosphatase##NM_002194|INPP1|3628|inositol polyphosphate-1-phosphatase##AK127176|MFSD6|54842|major facilitator superfamily domain containing 6##NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6##AK098085|MFSD6|54842|major facilitator superfamily domain containing 6##AK296987|TMEM194B|100131211|transmembrane protein 194B	0.471	CTCF.p2:-3:0.447
chr11	65547518	65547666	reg1002426.p1	14.823	+	TSC_hg19_v1_chr11_-_65488270 DQ892277 DQ895477 AF312034 AK024627 AK225131 AK297660 BC023588 AF346606 NM_032193	-59317	-	TSC_hg19_v1_chr11_-_65487976 L08647	-59623	-	BC117167 BC143290 BC143296 BC093032 TSC_hg19_v1_chr11_+_65479722 AK304664 BC064912 U67734 AB463743 HQ258620 BC013211 BC000166 U40989	-67817	+	NM_138368	229	-	NM_004561 BC059408 TSC_hg19_v1_chr11_+_65554533	6931	+	TSC_hg19_v1_chr11_+_65554569 AK291711 BX648725	7003	+	DQ892277|RNASEH2C|84153|ribonuclease H2, subunit C##DQ895477|RNASEH2C|84153|ribonuclease H2, subunit C##AF312034|RNASEH2C|84153|ribonuclease H2, subunit C##AK024627|RNASEH2C|84153|ribonuclease H2, subunit C##AK225131|RNASEH2C|84153|ribonuclease H2, subunit C##AK297660|RNASEH2C|84153|ribonuclease H2, subunit C##BC023588|RNASEH2C|84153|ribonuclease H2, subunit C##AF346606|RNASEH2C|84153|ribonuclease H2, subunit C##NM_032193|RNASEH2C|84153|ribonuclease H2, subunit C##L08647|RNASEH2C|84153|ribonuclease H2, subunit C##BC117167|KAT5|10524|K(lysine) acetyltransferase 5##BC143290|KAT5|10524|K(lysine) acetyltransferase 5##BC143296|KAT5|10524|K(lysine) acetyltransferase 5##BC093032|KAT5|10524|K(lysine) acetyltransferase 5##AK304664|KAT5|10524|K(lysine) acetyltransferase 5##BC064912|KAT5|10524|K(lysine) acetyltransferase 5##U67734|KAT5|10524|K(lysine) acetyltransferase 5##HQ258620|KAT5|10524|K(lysine) acetyltransferase 5##BC013211|KAT5|10524|K(lysine) acetyltransferase 5##BC000166|KAT5|10524|K(lysine) acetyltransferase 5##U40989|KAT5|10524|K(lysine) acetyltransferase 5##NM_138368|DKFZp761E198|91056|adaptor protein 5##NM_004561|OVOL1|5017|ovo-like 1(Drosophila)##BC059408|OVOL1|5017|ovo-like 1(Drosophila)##AK291711|OVOL1|5017|ovo-like 1(Drosophila)##BX648725|OVOL1|5017|ovo-like 1(Drosophila)	0.887352	CTCF.p2:20:0.343	CTCF.p2:-64:0.545
chr11	4094034	4094151	reg1002385.p1	14.821	+	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	-217163	+	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	-231893	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	-231937	-	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	21897	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	21974	+	TSC_hg19_v1_chr11_+_4116085 AK297988 BC006498 CU675435 DQ893028 DQ896272	22067	+	NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1##X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1##AK297988|RRM1|6240|ribonucleotide reductase M1##BC006498|RRM1|6240|ribonucleotide reductase M1##DQ893028|RRM1|6240|ribonucleotide reductase M1##DQ896272|RRM1|6240|ribonucleotide reductase M1	0.988413	CTCF.p2:22:0.988
chr1	67966237	67966348	reg1001833.p1	14.821	+	TSC_hg19_v1_chr1_-_67896101 NM_001018067 NM_001018068 NM_001018069 NM_015640	-70175	-	BX647139 TSC_hg19_v1_chr1_-_67896097	-70195	-	TSC_hg19_v1_chr1_-_67896086 AK312256	-70207	-	TSC_hg19_v1_chr1_+_68150883 AK314991 NM_001199741 NM_001199742 NM_001924 M60974 BC011757 DQ008445 EF581092 EF614238	184618	+	TSC_hg19_v1_chr1_+_68151094 AB463698 AM393439 DQ893229 DQ896558	184842	+	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	331696	+	NM_001018067|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018068|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018069|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_015640|SERBP1|26135|SERPINE1 mRNA binding protein 1##BX647139|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK312256|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AM393439|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ893229|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ896558|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AK124028|LOC100289178|100289178|uncharacterized LOC100289178	0.997361	CTCF.p2:20:0.997
chr2	38735596	38735736	reg1003226.p1	14.821	+	TSC_hg19_v1_chr2_-_38604430 NM_001135673 NM_022374	-131235	-	TSC_hg19_v1_chr2_-_38604411 BC053508 AK026946 AK225190 AK303985 AK308894	-131262	-	AK316179 TSC_hg19_v1_chr2_-_38525609	-210097	-	TSC_hg19_v1_chr2_-_38829619 CU675994	94025	-	TSC_hg19_v1_chr2_-_38830012 AY236962	94326	-	TSC_hg19_v1_chr2_-_38830065 AY236963 BC017480 AK291462	94374	-	NM_001135673|ATL2|64225|atlastin GTPase 2##NM_022374|ATL2|64225|atlastin GTPase 2##BC053508|ATL2|64225|atlastin GTPase 2##AK026946|ATL2|64225|atlastin GTPase 2##AK225190|ATL2|64225|atlastin GTPase 2##AK303985|ATL2|64225|atlastin GTPase 2##AK308894|ATL2|64225|atlastin GTPase 2##AK316179|ATL2|64225|atlastin GTPase 2##AY236962|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	0.93257	CTCF.p2:10:0.933
chr13	54356688	54356808	reg1002204.p2	14.819	+	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	-753836	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	-933973	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-1042786	-	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3358368	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3364938	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3371511	+	AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	0.988484	CTCF.p2:-24:0.988
chr17	53373425	53373540	reg1002790.p1	14.819	+	TSC_hg19_v1_chr17_+_53344967 AK295726 AK074289	-28496	+	AK290043 TSC_hg19_v1_chr17_+_53343204	-30295	+	TSC_hg19_v1_chr17_+_53342370 BC036093 M95585	-31041	+	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	125773	-	BC010128 AK001832 NM_018286	426667	-	AK095175 NM_001099640	435980	-	AK295726|HLF|3131|hepatic leukemia factor##AK074289|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor##BC036093|HLF|3131|hepatic leukemia factor##M95585|HLF|3131|hepatic leukemia factor##CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100	0.828002	CTCF.p2:1:0.828
chr21	16855596	16855743	reg1003122.p1	14.819	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	-418452	-	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	-937020	-	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-1100196	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	246656	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	246872	+	TSC_hg19_v1_chr21_+_18885168 NM_001207063 NM_001207064 NM_001207065 NM_001207066 NM_001338	2029494	+	AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25##NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor	0.999512	CTCF.p2:16:1.000
chr14	24559851	24559965	reg1002307.p1	14.818	+	M95925 M81840 NM_006177 BC012395 AB593104 AB593106 AB593102	-6078	-	AK314182 BC018046 AB009288 NM_006032 TSC_hg19_v1_chr14_+_24540770 AK294460 AK222675 AL137688	-19139	+	TSC_hg19_v1_chr14_+_24521201 NM_138360	-38732	+	TSC_hg19_v1_chr14_+_24563519 NM_001018073 NM_004563 AK311710 AK316206 AK129934 AK307913 X92720 BC001454 BX248272 CU674712 CR456913	3583	+	NM_001163484 TSC_hg19_v1_chr14_+_24583976	24033	+	TSC_hg19_v1_chr14_+_24583985 NM_025230 AB209073	24084	+	M95925|NRL|4901|neural retina leucine zipper##M81840|NRL|4901|neural retina leucine zipper##NM_006177|NRL|4901|neural retina leucine zipper##BC012395|NRL|4901|neural retina leucine zipper##AB593104|NRL|4901|neural retina leucine zipper##AB593106|NRL|4901|neural retina leucine zipper##AB593102|NRL|4901|neural retina leucine zipper##AK314182|CPNE6|9362|copine VI (neuronal)##BC018046|CPNE6|9362|copine VI (neuronal)##AB009288|CPNE6|9362|copine VI (neuronal)##NM_006032|CPNE6|9362|copine VI (neuronal)##AK294460|CPNE6|9362|copine VI (neuronal)##AK222675|CPNE6|9362|copine VI (neuronal)##AL137688|CPNE6|9362|copine VI (neuronal)##NM_138360|LRRC16B|90668|leucine rich repeat containing 16B##NM_001018073|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##NM_004563|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK311710|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK316206|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK129934|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK307913|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##X92720|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##BC001454|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##BX248272|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##CR456913|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##NM_001163484|DCAF11|80344|DDB1 and CUL4 associated factor 11##NM_025230|DCAF11|80344|DDB1 and CUL4 associated factor 11##AB209073|DCAF11|80344|DDB1 and CUL4 associated factor 11	1.007125	CTCF.p2:8:0.997
chr7	106377075	106377203	reg1003092.p1	14.818	+	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	-75636	-	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	-451616	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	-451777	-	TSC_hg19_v1_chr7_+_106505701 AK292684	128574	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	128635	+	TSC_hg19_v1_chr7_+_106505893 NM_002649 X83368	128790	+	AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74##BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	0.725875	CTCF.p2:13:0.726
chr9	17811133	17811254	reg1003330.p1	14.817	+	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	-232097	+	TSC_hg19_v1_chr9_+_17134988 AK303973 AK308837 BX647069 AK098502 NM_001114395 NM_017738	-676176	+	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	-940427	-	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	662895	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	662990	+	BC033489 AK292245 AK057474 NM_153707	1222026	-	AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##AK303973|CNTLN|54875|centlein, centrosomal protein##AK308837|CNTLN|54875|centlein, centrosomal protein##BX647069|CNTLN|54875|centlein, centrosomal protein##AK098502|CNTLN|54875|centlein, centrosomal protein##NM_001114395|CNTLN|54875|centlein, centrosomal protein##NM_017738|CNTLN|54875|centlein, centrosomal protein##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1##BC033489|FAM154A|158297|family with sequence similarity 154, member A##AK292245|FAM154A|158297|family with sequence similarity 154, member A##AK057474|FAM154A|158297|family with sequence similarity 154, member A##NM_153707|FAM154A|158297|family with sequence similarity 154, member A	0.999378	CTCF.p2:-6:0.999
chr10	17299814	17299939	reg1002183.p1	14.815	+	TSC_hg19_v1_chr10_-_17271978 BC078172	-27890	-	TSC_hg19_v1_chr10_+_17271962 AK093924	-27897	+	TSC_hg19_v1_chr10_+_17271887 M25246	-27988	+	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	196338	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	196489	-	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	359497	-	AK093924|VIM|7431|vimentin##M25246|VIM|7431|vimentin##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A	0.935016	CTCF.p2:15:0.935
chr1	208136968	208137115	reg1002865.p1	14.815	+	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-52484	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-52658	-	BX640941 TSC_hg19_v1_chr1_-_208059392	-77718	-	TSC_hg19_v1_chr1_-_208417635 NM_025179	280608	-	AK091113 AX746785 NM_001104548	1465124	+	NM_020439 AK095713 AK289675 AF428261 BC032787	1620019	+	BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_025179|PLXNA2|5362|plexin A2##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	0.99683	CTCF.p2:20:0.997
chr17	18151683	18151812	reg1002118.p1	14.814	+	TSC_hg19_v1_chr17_+_18128931 BC028037 NM_004140 BC151838 BC028214 X86371	-22809	+	TSC_hg19_v1_chr17_+_18087141 AK301107 BC062339	-64558	+	TSC_hg19_v1_chr17_+_18086815 NM_017758	-64908	+	AK310400 TSC_hg19_v1_chr17_-_18162017 AB208864 U01184 DQ893621 DQ896850	10196	-	AK295814 AK297836 TSC_hg19_v1_chr17_-_18162033 BC017030 AK295655	10282	-	TSC_hg19_v1_chr17_-_18162053 BC025300 NM_002018	10318	-	BC028037|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##NM_004140|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##BC151838|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##BC028214|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##X86371|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##AK301107|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##BC062339|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##NM_017758|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##AK310400|FLII|2314|flightless I homolog (Drosophila)##AB208864|FLII|2314|flightless I homolog (Drosophila)##U01184|FLII|2314|flightless I homolog (Drosophila)##DQ893621|FLII|2314|flightless I homolog (Drosophila)##DQ896850|FLII|2314|flightless I homolog (Drosophila)##AK295814|FLII|2314|flightless I homolog (Drosophila)##AK297836|FLII|2314|flightless I homolog (Drosophila)##BC017030|FLII|2314|flightless I homolog (Drosophila)##AK295655|FLII|2314|flightless I homolog (Drosophila)##BC025300|FLII|2314|flightless I homolog (Drosophila)##NM_002018|FLII|2314|flightless I homolog (Drosophila)	0.998326	CTCF.p2:-8:0.998
chr17	19078896	19078989	reg1002159.p1	14.813	+	BC157869 NM_001129778	-48161	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-128656	-	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-170863	-	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	61766	+	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	187027	-	TSC_hg19_v1_chr17_+_19281077 NM_139032 NM_139033 BC007404 BC007992 U29725 AK295376	202248	+	BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1##NM_139032|MAPK7|5598|mitogen-activated protein kinase 7##NM_139033|MAPK7|5598|mitogen-activated protein kinase 7##BC007404|MAPK7|5598|mitogen-activated protein kinase 7##BC007992|MAPK7|5598|mitogen-activated protein kinase 7##U29725|MAPK7|5598|mitogen-activated protein kinase 7##AK295376|MAPK7|5598|mitogen-activated protein kinase 7	1.011271	CTCF.p2:-6:1.000
chr10	33084648	33084787	reg1003474.p1	14.812	+	AK023093 NM_024688 BC125090 BC125091	-228011	+	TSC_hg19_v1_chr10_+_32735092 NM_001026383 NM_145023 AK057324 BC042672 BC022020	-349655	+	AF286905 AK309309 AK299676 TSC_hg19_v1_chr10_-_32667698	-417080	-	AB463074 AM393197 CU676490 DQ891069 DQ894251 NM_033668	139768	-	TSC_hg19_v1_chr10_-_33246826 NM_133376	162117	-	TSC_hg19_v1_chr10_-_33247146 BC020057 AK291697 BX537407	162422	-	AK023093|C10orf68|79741|chromosome 10 open reading frame 68##NM_024688|C10orf68|79741|chromosome 10 open reading frame 68##BC125090|C10orf68|79741|chromosome 10 open reading frame 68##BC125091|C10orf68|79741|chromosome 10 open reading frame 68##NM_001026383|CCDC7|221016|coiled-coil domain containing 7##NM_145023|CCDC7|221016|coiled-coil domain containing 7##AK057324|CCDC7|221016|coiled-coil domain containing 7##BC042672|CCDC7|221016|coiled-coil domain containing 7##BC022020|CCDC7|221016|coiled-coil domain containing 7##AF286905|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AK309309|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AK299676|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AM393197|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##DQ891069|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##DQ894251|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##NM_033668|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##NM_133376|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BC020057|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##AK291697|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BX537407|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	0.063567	
chr7	104563453	104563585	reg1002219.p1	14.812	+	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-594301	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-715088	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-933523	-	TSC_hg19_v1_chr7_-_104567089 BC050337	3571	-	TSC_hg19_v1_chr7_-_104653491 AK124046	89963	-	TSC_hg19_v1_chr7_-_104654062 AK094372	90555	-	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##BC050337|LOC723809|723809|uncharacterized LOC723809##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545	0.752705	CTCF.p2:-19:0.753
chr1	111876904	111877036	reg1003325.p1	14.807	+	AK290702 AB025008 AB025009 AY825504 NM_021797 AF290004 AY789444 NM_201653	-43465	+	NM_001025199 U58515 AK298466 AK223316	-104578	+	NM_001025197 NM_004000 U58514 U49835 BC011460 BT006767 DQ893705 CU679936	-106654	+	BC093891 BC101501 HM237139 NM_181643 AK303897 BC050319 AK310801 AK074433 BC068603 HM237140	12264	+	U09550 AK298757 AK314074 BC126177 BC136406 AY189737 NM_002557	93406	-	NM_001688	114772	+	AK290702|CHIA|27159|chitinase, acidic##AB025008|CHIA|27159|chitinase, acidic##AB025009|CHIA|27159|chitinase, acidic##AY825504|CHIA|27159|chitinase, acidic##NM_021797|CHIA|27159|chitinase, acidic##AF290004|CHIA|27159|chitinase, acidic##AY789444|CHIA|27159|chitinase, acidic##NM_201653|CHIA|27159|chitinase, acidic##NM_001025199|CHI3L2|1117|chitinase 3-like 2##U58515|CHI3L2|1117|chitinase 3-like 2##AK298466|CHI3L2|1117|chitinase 3-like 2##AK223316|CHI3L2|1117|chitinase 3-like 2##NM_001025197|CHI3L2|1117|chitinase 3-like 2##NM_004000|CHI3L2|1117|chitinase 3-like 2##U58514|CHI3L2|1117|chitinase 3-like 2##U49835|CHI3L2|1117|chitinase 3-like 2##BC011460|CHI3L2|1117|chitinase 3-like 2##BT006767|CHI3L2|1117|chitinase 3-like 2##DQ893705|CHI3L2|1117|chitinase 3-like 2##BC093891|C1orf88|128344|chromosome 1 open reading frame 88##BC101501|C1orf88|128344|chromosome 1 open reading frame 88##HM237139|C1orf88|128344|chromosome 1 open reading frame 88##NM_181643|C1orf88|128344|chromosome 1 open reading frame 88##AK303897|C1orf88|128344|chromosome 1 open reading frame 88##BC050319|C1orf88|128344|chromosome 1 open reading frame 88##AK310801|C1orf88|128344|chromosome 1 open reading frame 88##AK074433|C1orf88|128344|chromosome 1 open reading frame 88##BC068603|C1orf88|128344|chromosome 1 open reading frame 88##HM237140|C1orf88|128344|chromosome 1 open reading frame 88##U09550|OVGP1|5016|oviductal glycoprotein 1, 120kDa##AK298757|OVGP1|5016|oviductal glycoprotein 1, 120kDa##AK314074|OVGP1|5016|oviductal glycoprotein 1, 120kDa##BC126177|OVGP1|5016|oviductal glycoprotein 1, 120kDa##BC136406|OVGP1|5016|oviductal glycoprotein 1, 120kDa##AY189737|OVGP1|5016|oviductal glycoprotein 1, 120kDa##NM_002557|OVGP1|5016|oviductal glycoprotein 1, 120kDa##NM_001688|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1	0.137736	
chr17	30580197	30580310	reg1002924.p1	14.807	+	TSC_hg19_v1_chr17_+_30469588 BC092401 BC068463 AY094972 BC125104 BC125105 AL136929 BC029029 AK294407 AB527368 AM393207 BC146694 AJ517412	-110614	+	TSC_hg19_v1_chr17_+_30469544 BC110895	-110708	+	TSC_hg19_v1_chr17_+_30469520 BC041114	-110731	+	AJ313480 BC100975 BC100976 BC100978 NM_138328 BC100977	12941	+	TSC_hg19_v1_chr17_-_30669193 AF052093 CU691078 BC054035 BC047325 BC026017 BC035715 AF305686 NM_022344	88954	-	TSC_hg19_v1_chr17_+_30677175 BC002372 NM_001032293 NM_001098507 NM_003457	96903	+	BC092401|RHOT1|55288|ras homolog gene family, member T1##BC068463|RHOT1|55288|ras homolog gene family, member T1##AY094972|RHOT1|55288|ras homolog gene family, member T1##BC125104|RHOT1|55288|ras homolog gene family, member T1##BC125105|RHOT1|55288|ras homolog gene family, member T1##AL136929|RHOT1|55288|ras homolog gene family, member T1##BC029029|RHOT1|55288|ras homolog gene family, member T1##AK294407|RHOT1|55288|ras homolog gene family, member T1##AM393207|RHOT1|55288|ras homolog gene family, member T1##BC146694|RHOT1|55288|ras homolog gene family, member T1##AJ517412|RHOT1|55288|ras homolog gene family, member T1##BC110895|RHOT1|55288|ras homolog gene family, member T1##BC041114|RHOT1|55288|ras homolog gene family, member T1##AJ313480|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC100975|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC100976|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC100978|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##NM_138328|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC100977|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##AF052093|C17orf75|64149|chromosome 17 open reading frame 75##BC054035|C17orf75|64149|chromosome 17 open reading frame 75##BC047325|C17orf75|64149|chromosome 17 open reading frame 75##BC026017|C17orf75|64149|chromosome 17 open reading frame 75##BC035715|C17orf75|64149|chromosome 17 open reading frame 75##AF305686|C17orf75|64149|chromosome 17 open reading frame 75##NM_022344|C17orf75|64149|chromosome 17 open reading frame 75##BC002372|ZNF207|7756|zinc finger protein 207##NM_001032293|ZNF207|7756|zinc finger protein 207##NM_001098507|ZNF207|7756|zinc finger protein 207##NM_003457|ZNF207|7756|zinc finger protein 207	0.657476	CTCF.p2:-10:0.657
chr5	149208097	149208217	reg1002116.p1	14.806	+	AK123614 NM_001172699	-56655	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	-98281	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	-98330	+	BC144044 BC035909 AB593141 M26061 NM_000440	116161	-	TSC_hg19_v1_chr5_+_149340320 NM_000112	132151	+	TSC_hg19_v1_chr5_+_149340352 AK312596	132194	+	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144044|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##BC035909|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##AB593141|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##M26061|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000440|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2	0.939684	CTCF.p2:11:0.940
chr15	66896078	66896174	reg1001789.p1	14.805	+	TSC_hg19_v1_chr15_+_66874506 BC016970	-21610	+	AB527178 AY358729 NM_207338	-38357	-	AK122787 TSC_hg19_v1_chr15_+_66797663 AK291048 BC090041 BC036900	-98468	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	98548	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	99433	+	NM_001142861 U59914	104803	+	AY358729|LCTL|197021|lactase-like##NM_207338|LCTL|197021|lactase-like##AK122787|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AK291048|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC090041|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC036900|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6	0.918914	CTCF.p2:-15:0.919
chr3	129745375	129745530	reg1002884.p1	14.805	+	NM_007117 TSC_hg19_v1_chr3_+_129693145	-52323	+	TSC_hg19_v1_chr3_+_129612705 AK127796	-132734	+	TSC_hg19_v1_chr3_-_129612445 NM_001128224	-133034	-	NM_001136152 BC127755	55286	+	TSC_hg19_v1_chr3_-_129830276 BC083497	84843	-	TSC_hg19_v1_chr3_-_129830331 BC071676	84897	-	NM_007117|TRH|7200|thyrotropin-releasing hormone##AK127796|LOC100507032|100507032|uncharacterized LOC100507032##NM_001128224|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001136152|ALG1L2|644974|asparagine-linked glycosylation 1-like 2	1.23671	CTCF.p2:-29:0.892	CTCF.p2:73:0.345
chr2	68668946	68669084	reg1001991.p1	14.804	+	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	-76558	+	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	-76643	+	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	-121915	-	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	25395	-	TSC_hg19_v1_chr2_+_68694716 AK290841 NM_173545 AK308186 BC041144 CU691972	25749	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	203938	+	DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48##AK290841|APLF|200558|aprataxin and PNKP like factor##NM_173545|APLF|200558|aprataxin and PNKP like factor##AK308186|APLF|200558|aprataxin and PNKP like factor##BC041144|APLF|200558|aprataxin and PNKP like factor##AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1	0.999369	CTCF.p2:42:0.999
chr7	70322060	70322187	reg1002801.p1	14.803	+	TSC_hg19_v1_chr7_+_70231164 AK296981	-90918	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-1257535	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-1257794	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	275665	+	AK123862 TSC_hg19_v1_chr7_-_71801809	1479655	-	NM_001017440 TSC_hg19_v1_chr7_-_71802376	1480181	-	AK296981|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1##NM_001017440|CALN1|83698|calneuron 1	0.999908	CTCF.p2:-24:1.000
chrX	22003536	22003688	reg1001317.p1	14.803	+	NM_004595 TSC_hg19_v1_chrX_+_21958824 AD001528 AK293455 AK313834 BC009898 BC085621 EU176347	-44786	+	AK091850 NM_206923	-129508	+	TSC_hg19_v1_chrX_+_21857790 AK312474 AB385581 CU690354	-145794	+	NM_000444 U87284 AD000712 AK298030 BC105057 BC105059 U75645 U60475	47413	+	GQ355336 NM_152577 AK098601 BC074910 BC126190 BC126192 HQ258412 HQ258552	287456	+	AY039237 NM_182699 BC067878 BC051703	1014472	+	NM_004595|SMS|6611|spermine synthase##AD001528|SMS|6611|spermine synthase##AK293455|SMS|6611|spermine synthase##AK313834|SMS|6611|spermine synthase##BC009898|SMS|6611|spermine synthase##BC085621|SMS|6611|spermine synthase##EU176347|SMS|6611|spermine synthase##AK091850|YY2|404281|YY2 transcription factor##NM_206923|YY2|404281|YY2 transcription factor##AK312474|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2##NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##GQ355336|ZNF645|158506|zinc finger protein 645##NM_152577|ZNF645|158506|zinc finger protein 645##AK098601|ZNF645|158506|zinc finger protein 645##BC074910|ZNF645|158506|zinc finger protein 645##BC126190|ZNF645|158506|zinc finger protein 645##BC126192|ZNF645|158506|zinc finger protein 645##HQ258412|ZNF645|158506|zinc finger protein 645##HQ258552|ZNF645|158506|zinc finger protein 645##AY039237|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##NM_182699|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC067878|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC051703|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53	1.975053	CTCF.p2:40:0.997	CTCF.p2:-53:0.978
chr20	31262262	31262372	reg1002378.p2	14.802	+	BC105014 BC105042 AK091025 AX746738 NM_182584	-22647	-	BC023657 BC065483 TSC_hg19_v1_chr20_-_31172902	-89394	-	BC038088 TSC_hg19_v1_chr20_-_31071385	-190926	-	AY542162 TSC_hg19_v1_chr20_-_31331262 BC000628 AK097059 AK027893	68936	-	BC047440 TSC_hg19_v1_chr20_-_31331396	69068	-	AK096307 BC022073 NM_001099339 NM_053041	69490	-	BC105014|C20orf203|284805|chromosome 20 open reading frame 203##BC105042|C20orf203|284805|chromosome 20 open reading frame 203##AK091025|C20orf203|284805|chromosome 20 open reading frame 203##NM_182584|C20orf203|284805|chromosome 20 open reading frame 203##BC023657|LOC284804|284804|uncharacterized LOC284804##BC065483|LOC284804|284804|uncharacterized LOC284804##BC038088|C20orf112|140688|chromosome 20 open reading frame 112##AY542162|COMMD7|149951|COMM domain containing 7##BC000628|COMMD7|149951|COMM domain containing 7##AK097059|COMMD7|149951|COMM domain containing 7##AK027893|COMMD7|149951|COMM domain containing 7##BC047440|COMMD7|149951|COMM domain containing 7##AK096307|COMMD7|149951|COMM domain containing 7##BC022073|COMMD7|149951|COMM domain containing 7##NM_001099339|COMMD7|149951|COMM domain containing 7##NM_053041|COMMD7|149951|COMM domain containing 7	0.281183	CTCF.p2:-8:0.281
chr5	170218471	170218600	reg1003770.p1	14.800	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	-7781	+	TSC_hg19_v1_chr5_+_169931023 BC035032 NM_001034837 NM_014592	-287500	+	BC025707 NM_004137 AK313979	-401888	-	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	70396	+	TSC_hg19_v1_chr5_+_170289029 AJ271459 AJ288952 AJ288953 AJ288954 AJ288955 BC030953 AF222747 AB527205 AL832980	70487	+	BC017291 NM_021025 DQ892654 DQ895893 DQ896085	517793	+	AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC035032|KCNIP1|30820|Kv channel interacting protein 1##NM_001034837|KCNIP1|30820|Kv channel interacting protein 1##NM_014592|KCNIP1|30820|Kv channel interacting protein 1##BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17##AJ271459|RANBP17|64901|RAN binding protein 17##AJ288952|RANBP17|64901|RAN binding protein 17##AJ288953|RANBP17|64901|RAN binding protein 17##AJ288954|RANBP17|64901|RAN binding protein 17##AJ288955|RANBP17|64901|RAN binding protein 17##BC030953|RANBP17|64901|RAN binding protein 17##AF222747|RANBP17|64901|RAN binding protein 17##AL832980|RANBP17|64901|RAN binding protein 17##BC017291|TLX3|30012|T-cell leukemia homeobox 3##NM_021025|TLX3|30012|T-cell leukemia homeobox 3##DQ892654|TLX3|30012|T-cell leukemia homeobox 3##DQ895893|TLX3|30012|T-cell leukemia homeobox 3##DQ896085|TLX3|30012|T-cell leukemia homeobox 3	0.994783	CTCF.p2:15:0.995
chr1	97432231	97432370	reg1003570.p1	14.798	+	BC030757 TSC_hg19_v1_chr1_+_97260652	-171717	+	NM_021190 TSC_hg19_v1_chr1_+_97187343 AK092216 AB051232 AK299755 AK299922 AB209266 AF530580 AF530581 AF176085 AK299897 BC016582 AB051233	-245016	+	AB055763 TSC_hg19_v1_chr1_-_97145197	-287104	-	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	954189	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	954259	-	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	954306	-	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2##AK092216|PTBP2|58155|polypyrimidine tract binding protein 2##AB051232|PTBP2|58155|polypyrimidine tract binding protein 2##AK299755|PTBP2|58155|polypyrimidine tract binding protein 2##AK299922|PTBP2|58155|polypyrimidine tract binding protein 2##AB209266|PTBP2|58155|polypyrimidine tract binding protein 2##AF530580|PTBP2|58155|polypyrimidine tract binding protein 2##AF530581|PTBP2|58155|polypyrimidine tract binding protein 2##AF176085|PTBP2|58155|polypyrimidine tract binding protein 2##AK299897|PTBP2|58155|polypyrimidine tract binding protein 2##BC016582|PTBP2|58155|polypyrimidine tract binding protein 2##AB051233|PTBP2|58155|polypyrimidine tract binding protein 2##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase	0.999826	CTCF.p2:-1:1.000
chr11	47174758	47174887	reg1002431.p1	14.795	+	TSC_hg19_v1_chr11_+_46958328 AK316318 NM_001003676 NM_001003677 NM_001003678 NM_024113 AK315639 BC001860 BC009455 AL136575 BC052291 BC013988 AK300813 AK025863 AK293609 AB528079 AM393584 AM393807 CR457351 CU679361 CU680726	-216530	+	TSC_hg19_v1_chr11_-_46940102 AB384531 AB231861 BC136667 BC136668 AB084910 NM_002334 BC110808	-234760	-	TSC_hg19_v1_chr11_-_46867841 NM_001008938 NM_014756	-306969	-	AK301785 AL834337 EU832352 EU832437 AK300347 BC036823 AK027482 TSC_hg19_v1_chr11_-_47198413 AK304541 BC030148	23577	-	TSC_hg19_v1_chr11_-_47198431 AK315992 AK098324	23611	-	NM_001242832 NM_032389	23853	-	AK316318|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003676|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003677|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003678|C11orf49|79096|chromosome 11 open reading frame 49##NM_024113|C11orf49|79096|chromosome 11 open reading frame 49##AK315639|C11orf49|79096|chromosome 11 open reading frame 49##BC001860|C11orf49|79096|chromosome 11 open reading frame 49##BC009455|C11orf49|79096|chromosome 11 open reading frame 49##AL136575|C11orf49|79096|chromosome 11 open reading frame 49##BC052291|C11orf49|79096|chromosome 11 open reading frame 49##BC013988|C11orf49|79096|chromosome 11 open reading frame 49##AK300813|C11orf49|79096|chromosome 11 open reading frame 49##AK025863|C11orf49|79096|chromosome 11 open reading frame 49##AK293609|C11orf49|79096|chromosome 11 open reading frame 49##AM393584|C11orf49|79096|chromosome 11 open reading frame 49##AM393807|C11orf49|79096|chromosome 11 open reading frame 49##CR457351|C11orf49|79096|chromosome 11 open reading frame 49##AB231861|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136667|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136668|LRP4|4038|low density lipoprotein receptor-related protein 4##AB084910|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_002334|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_001008938|CKAP5|9793|cytoskeleton associated protein 5##NM_014756|CKAP5|9793|cytoskeleton associated protein 5##AK301785|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AL834337|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832352|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832437|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300347|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC036823|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK027482|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK304541|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC030148|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK315992|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK098324|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_001242832|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_032389|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2	0.988374	CTCF.p2:7:0.975
chr20	17879269	17879390	reg1002762.p1	14.795	+	BC054871 NM_001014977 NM_178477 BC062735	-198731	+	NM_001159495	-205010	+	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	-216446	-	BT007191 AB464237 TSC_hg19_v1_chr20_-_17949155 AK223308 AK001793 AK129505 NM_014426 BC093623 BC093980 BC143274	69885	-	TSC_hg19_v1_chr20_-_17949438 BC002724 BC062638 BC064555 BC073171 AK123903 AK308017 AK296947 BC000100 AF121855 NM_152227	70111	-	TSC_hg19_v1_chr20_+_17949742 AF306686 AK315532 AF306684 AF306685 AK027503 BC016869 NM_052865	70333	+	BC054871|BANF2|140836|barrier to autointegration factor 2##NM_001014977|BANF2|140836|barrier to autointegration factor 2##NM_178477|BANF2|140836|barrier to autointegration factor 2##BC062735|BANF2|140836|barrier to autointegration factor 2##NM_001159495|BANF2|140836|barrier to autointegration factor 2##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BT007191|SNX5|27131|sorting nexin 5##AK223308|SNX5|27131|sorting nexin 5##AK001793|SNX5|27131|sorting nexin 5##AK129505|SNX5|27131|sorting nexin 5##NM_014426|SNX5|27131|sorting nexin 5##BC093623|SNX5|27131|sorting nexin 5##BC093980|SNX5|27131|sorting nexin 5##BC143274|SNX5|27131|sorting nexin 5##BC002724|SNX5|27131|sorting nexin 5##BC062638|SNX5|27131|sorting nexin 5##AK123903|SNX5|27131|sorting nexin 5##AK308017|SNX5|27131|sorting nexin 5##AK296947|SNX5|27131|sorting nexin 5##BC000100|SNX5|27131|sorting nexin 5##AF121855|SNX5|27131|sorting nexin 5##NM_152227|SNX5|27131|sorting nexin 5##AF306686|C20orf72|92667|chromosome 20 open reading frame 72##AK315532|C20orf72|92667|chromosome 20 open reading frame 72##AF306684|C20orf72|92667|chromosome 20 open reading frame 72##AF306685|C20orf72|92667|chromosome 20 open reading frame 72##AK027503|C20orf72|92667|chromosome 20 open reading frame 72##BC016869|C20orf72|92667|chromosome 20 open reading frame 72##NM_052865|C20orf72|92667|chromosome 20 open reading frame 72	0.032212	
chr2	105731069	105731220	reg1003932.p1	14.795	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	-76630	+	TSC_hg19_v1_chr2_+_105471877 NM_006236	-259246	+	TSC_hg19_v1_chr2_-_105467912 AK096498	-263228	-	BC066879 BC066880 BC067455 NM_007227 CU688176 EU883573	127113	+	TSC_hg19_v1_chr2_-_105946156 BC020548 BC010093 NM_001142621 NM_004257	215008	-	AK304268 TSC_hg19_v1_chr2_+_105953980 AK307891	222766	+	NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9##NM_006236|POU3F3|5455|POU class 3 homeobox 3##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##BC066879|GPR45|11250|G protein-coupled receptor 45##BC066880|GPR45|11250|G protein-coupled receptor 45##BC067455|GPR45|11250|G protein-coupled receptor 45##NM_007227|GPR45|11250|G protein-coupled receptor 45##EU883573|GPR45|11250|G protein-coupled receptor 45##BC020548|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_001142621|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_004257|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##AK304268|C2orf49|79074|chromosome 2 open reading frame 49##AK307891|C2orf49|79074|chromosome 2 open reading frame 49	0.417183	CTCF.p2:-8:0.417
chrX	70349145	70349267	reg1003151.p1	14.793	+	TSC_hg19_v1_chrX_+_70338445 AK302543 NM_005120 AF071309	-10702	+	AB102794 AB102797 AB102793 AB102795 CU677147 DQ895451 EU176337 TSC_hg19_v1_chrX_-_70331422 AB463801 BC014972 BC071710 D11086 AK314932 AK298656 NM_000206	-17818	-	NM_001025265	-22569	-	NM_001166660 NM_018977 NM_181303 BX641059 TSC_hg19_v1_chrX_+_70364698 BC028738 AK299669	15483	+	TSC_hg19_v1_chrX_+_70364710 AF217411 AX773948 AX773949	15507	+	TSC_hg19_v1_chrX_+_70364730 BC051715	15534	+	AK302543|MED12|9968|mediator complex subunit 12##NM_005120|MED12|9968|mediator complex subunit 12##AF071309|MED12|9968|mediator complex subunit 12##AB102794|IL2RG|3561|interleukin 2 receptor, gamma##AB102797|IL2RG|3561|interleukin 2 receptor, gamma##AB102793|IL2RG|3561|interleukin 2 receptor, gamma##AB102795|IL2RG|3561|interleukin 2 receptor, gamma##DQ895451|IL2RG|3561|interleukin 2 receptor, gamma##EU176337|IL2RG|3561|interleukin 2 receptor, gamma##BC014972|IL2RG|3561|interleukin 2 receptor, gamma##BC071710|IL2RG|3561|interleukin 2 receptor, gamma##D11086|IL2RG|3561|interleukin 2 receptor, gamma##AK314932|IL2RG|3561|interleukin 2 receptor, gamma##AK298656|IL2RG|3561|interleukin 2 receptor, gamma##NM_000206|IL2RG|3561|interleukin 2 receptor, gamma##NM_001025265|CXorf65|158830|chromosome X open reading frame 65##NM_001166660|NLGN3|54413|neuroligin 3##NM_018977|NLGN3|54413|neuroligin 3##NM_181303|NLGN3|54413|neuroligin 3##BX641059|NLGN3|54413|neuroligin 3##BC028738|NLGN3|54413|neuroligin 3##AK299669|NLGN3|54413|neuroligin 3##AF217411|NLGN3|54413|neuroligin 3##BC051715|NLGN3|54413|neuroligin 3	0.999214	CTCF.p2:1:0.999
chr18	48636829	48636956	reg1003421.p1	14.792	+	TSC_hg19_v1_chr18_+_48556613 AK290770 BC002379	-80286	+	TSC_hg19_v1_chr18_+_48556582 NM_005359	-80358	+	TSC_hg19_v1_chr18_+_48494409 AK024822 AF308695 AK303027 AK310911 BC014624 AK223507 AB029151	-142471	+	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	86334	-	AY950679 TSC_hg19_v1_chr18_-_48723734	86820	-	TSC_hg19_v1_chr18_-_48724033 NM_016626	87148	-	AK290770|SMAD4|4089|SMAD family member 4##BC002379|SMAD4|4089|SMAD family member 4##NM_005359|SMAD4|4089|SMAD family member 4##AK024822|ELAC1|55520|elaC homolog 1 (E. coli)##AF308695|ELAC1|55520|elaC homolog 1 (E. coli)##AK310911|ELAC1|55520|elaC homolog 1 (E. coli)##BC014624|ELAC1|55520|elaC homolog 1 (E. coli)##AK223507|ELAC1|55520|elaC homolog 1 (E. coli)##AB029151|ELAC1|55520|elaC homolog 1 (E. coli)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)	0.179331	
chr5	4879952	4880080	reg1003114.p1	14.791	+	AY335938 NM_024337	-1283849	+	AY249325 NM_178569 BC101608 BC101634 BC143638 BC143639 BC143640 BC171731	-2127715	+	AB188492 NM_001134222 NM_033267 BC065189	-2128245	-	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	260495	+	TSC_hg19_v1_chr5_+_5422777 AK126937	542759	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	542893	+	AY335938|IRX1|79192|iroquois homeobox 1##NM_024337|IRX1|79192|iroquois homeobox 1##AY249325|C5orf38|153571|chromosome 5 open reading frame 38##NM_178569|C5orf38|153571|chromosome 5 open reading frame 38##BC101608|C5orf38|153571|chromosome 5 open reading frame 38##BC101634|C5orf38|153571|chromosome 5 open reading frame 38##BC143638|C5orf38|153571|chromosome 5 open reading frame 38##BC143639|C5orf38|153571|chromosome 5 open reading frame 38##BC143640|C5orf38|153571|chromosome 5 open reading frame 38##BC171731|C5orf38|153571|chromosome 5 open reading frame 38##AB188492|IRX2|153572|iroquois homeobox 2##NM_001134222|IRX2|153572|iroquois homeobox 2##NM_033267|IRX2|153572|iroquois homeobox 2##BC065189|IRX2|153572|iroquois homeobox 2##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947	0.997747	CTCF.p2:-15:0.998
chr15	84864492	84864623	reg1002715.p1	14.789	+	NM_001243531	-23316	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-541730	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-748329	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	279724	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	332915	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	332949	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	1.760581	CTCF.p2:-7:0.999	CTCF.p2:-100:0.762
chr1	9256606	9256731	reg1002830.p1	14.788	+	DQ892804 DQ896051 TSC_hg19_v1_chr1_-_9189169 AK022194 AK292888 AK304154 AY768808 NM_024980 BC094733 BC018691	-67447	-	TSC_hg19_v1_chr1_-_9129695 M55531 AK290398 AK294368 NM_001135585 NM_003039	-126892	-	TSC_hg19_v1_chr1_-_9129644 AK289849 BC001692 BC001820 AK295785 BC035878	-127027	-	TSC_hg19_v1_chr1_+_9294832 BC081559	38147	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	38249	+	CR749282 TSC_hg19_v1_chr1_+_9299950	43270	+	DQ892804|GPR157|80045|G protein-coupled receptor 157##DQ896051|GPR157|80045|G protein-coupled receptor 157##AK022194|GPR157|80045|G protein-coupled receptor 157##AK292888|GPR157|80045|G protein-coupled receptor 157##AK304154|GPR157|80045|G protein-coupled receptor 157##AY768808|GPR157|80045|G protein-coupled receptor 157##NM_024980|GPR157|80045|G protein-coupled receptor 157##BC018691|GPR157|80045|G protein-coupled receptor 157##M55531|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK290398|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK294368|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_001135585|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_003039|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK289849|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001692|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001820|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK295785|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC035878|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##CR749282|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	0.077017	
chr14	94359422	94359550	reg1003388.p1	14.787	+	AY225516 AY225517 NM_178013	-104721	-	AY161004 NM_182971 BC101125 BC101126	-545938	+	AK125327 NM_020818	-559922	+	NM_001207071 NM_138344 AK093387 AX748092	25762	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	34222	+	AB056723 NM_016150	64280	-	AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##AY161004|COX8C|341947|cytochrome c oxidase subunit VIIIC##NM_182971|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101125|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101126|COX8C|341947|cytochrome c oxidase subunit VIIIC##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A##AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2	0.878339	CTCF.p2:-11:0.878
chr5	151031698	151031829	reg1002997.p1	14.786	+	AF231022 NM_001447	-83259	-	TSC_hg19_v1_chr5_+_150827239 AY162213 BC136437 BC136438	-204519	+	AK309323 TSC_hg19_v1_chr5_+_150827187	-204574	+	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	34698	-	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	34745	-	TSC_hg19_v1_chr5_-_151138170 AK091843 AX747215 NM_004045 AK293063 BC112248 BC112250	106452	-	AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##AY162213|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136437|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136438|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AK309323|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK091843|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##NM_004045|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AK293063|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112248|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112250|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)	0.982647	CTCF.p2:9:0.983
chr1	147099438	147099541	reg1002168.p2	14.785	+	NM_004326 Y13620 AK298105 TSC_hg19_v1_chr1_+_147013319	-86238	+	TSC_hg19_v1_chr1_+_146714335 AK298424 AK297135 BC077717 AK293157 BC001171 AF054177 BC043501 BC053354 BC005038	-385125	+	NM_004284 TSC_hg19_v1_chr1_+_146714333 EF560738 AF537213 AK001342 AK027631 AK307400	-385178	+	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	43005	-	BC013313 NM_181703	133209	-	NM_005266	145994	-	NM_004326|BCL9|607|B-cell CLL/lymphoma 9##Y13620|BCL9|607|B-cell CLL/lymphoma 9##AK298424|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK297135|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC077717|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK293157|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC001171|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF054177|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC043501|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC053354|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC005038|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##NM_004284|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##EF560738|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF537213|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK001342|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK027631|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK307400|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_005266|GJA5|2702|gap junction protein, alpha 5, 40kDa	0.960252	CTCF.p2:-5:0.960
chr13	40517035	40517161	reg1002490.p1	14.785	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-287237	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-339736	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-339771	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	723614	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	828194	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	828234	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	1.167651	CTCF.p2:20:0.994
chr22	50323313	50323433	reg1002601.p1	14.784	+	TSC_hg19_v1_chr22_+_50312337 BC050675 DQ470678 AK225930 AY358355 BC002894 DQ470676 DQ470677 DQ470680 AJ968414	-10998	+	TSC_hg19_v1_chr22_+_50312328 DQ470679 NM_001135101 NM_024324 AK308692 AK308535	-11069	+	TSC_hg19_v1_chr22_-_50312107 NM_024105	-11266	-	TSC_hg19_v1_chr22_+_50354140 NM_001001852 AB114795	30776	+	TSC_hg19_v1_chr22_+_50354433 AK292005 BC141855 BC052239 AB528933 BC140030	31138	+	NM_001001694 AK123987	127697	-	BC050675|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470678|CRELD2|79174|cysteine-rich with EGF-like domains 2##AK225930|CRELD2|79174|cysteine-rich with EGF-like domains 2##AY358355|CRELD2|79174|cysteine-rich with EGF-like domains 2##BC002894|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470676|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470677|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470680|CRELD2|79174|cysteine-rich with EGF-like domains 2##AJ968414|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470679|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_001135101|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_024324|CRELD2|79174|cysteine-rich with EGF-like domains 2##AK308535|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_024105|ALG12|79087|asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae)##NM_001001852|PIM3|415116|pim-3 oncogene##AB114795|PIM3|415116|pim-3 oncogene##AK292005|PIM3|415116|pim-3 oncogene##BC141855|PIM3|415116|pim-3 oncogene##BC052239|PIM3|415116|pim-3 oncogene##BC140030|PIM3|415116|pim-3 oncogene##NM_001001694|IL17REL|400935|interleukin 17 receptor E-like##AK123987|IL17REL|400935|interleukin 17 receptor E-like	1.011477	CTCF.p2:-20:1.000
chr10	126429976	126430089	reg1002111.p2	14.783	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-279611	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-291455	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-322514	-	D50930 TSC_hg19_v1_chr10_-_126432660	2612	-	TSC_hg19_v1_chr10_-_126432823 BC031654	2784	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	2879	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.027758	
chr1	229393900	229394047	reg1003228.p1	14.783	+	TSC_hg19_v1_chr1_+_228871199 AB209511 AK289971 BC040076 AF282258 AB074878 AB051826 AF378087	-522674	+	TSC_hg19_v1_chr1_+_228870806 NM_021205 AF211836	-523129	+	AK055963 TSC_hg19_v1_chr1_+_228783500	-610542	+	AK313807 TSC_hg19_v1_chr1_+_229406857 BC004309 NM_004578 AY585832	12912	+	BC002438 TSC_hg19_v1_chr1_+_229407039 AK223009 M28211 AB463206 AF498934 AM392940 AM393585 DQ892636 DQ895874	13077	+	BC107681 NM_006542	46155	+	AB209511|RHOU|58480|ras homolog gene family, member U##AK289971|RHOU|58480|ras homolog gene family, member U##BC040076|RHOU|58480|ras homolog gene family, member U##AF282258|RHOU|58480|ras homolog gene family, member U##AB074878|RHOU|58480|ras homolog gene family, member U##AB051826|RHOU|58480|ras homolog gene family, member U##AF378087|RHOU|58480|ras homolog gene family, member U##NM_021205|RHOU|58480|ras homolog gene family, member U##AF211836|RHOU|58480|ras homolog gene family, member U##AK055963|DUSP5P|574029|dual specificity phosphatase 5 pseudogene##AK313807|RAB4A|5867|RAB4A, member RAS oncogene family##BC004309|RAB4A|5867|RAB4A, member RAS oncogene family##NM_004578|RAB4A|5867|RAB4A, member RAS oncogene family##AY585832|RAB4A|5867|RAB4A, member RAS oncogene family##BC002438|RAB4A|5867|RAB4A, member RAS oncogene family##AK223009|RAB4A|5867|RAB4A, member RAS oncogene family##M28211|RAB4A|5867|RAB4A, member RAS oncogene family##AF498934|RAB4A|5867|RAB4A, member RAS oncogene family##AM392940|RAB4A|5867|RAB4A, member RAS oncogene family##AM393585|RAB4A|5867|RAB4A, member RAS oncogene family##DQ892636|RAB4A|5867|RAB4A, member RAS oncogene family##DQ895874|RAB4A|5867|RAB4A, member RAS oncogene family##BC107681|SPHAR|10638|S-phase response (cyclin related)##NM_006542|SPHAR|10638|S-phase response (cyclin related)	0.997502	CTCF.p2:-16:0.998
chr11	57017310	57017438	reg1002796.p2	14.782	+	AK075252 BC032688 AK315542 AK074514 X89271 NM_005161	-12574	-	AK127591 NM_001005210 BC136737 BC136739 BC150572	-68075	+	BC137198 NM_001005323	-261007	+	AF441771 TSC_hg19_v1_chr11_-_57089790	72372	-	TSC_hg19_v1_chr11_-_57092425 AB051528 BC150333 NM_033396 AK124903	75001	-	AB209132 BC091486 TSC_hg19_v1_chr11_-_57103354 M86737 NM_003146	85975	-	AK075252|APLNR|187|apelin receptor##BC032688|APLNR|187|apelin receptor##AK315542|APLNR|187|apelin receptor##AK074514|APLNR|187|apelin receptor##X89271|APLNR|187|apelin receptor##NM_005161|APLNR|187|apelin receptor##AK127591|LRRC55|219527|leucine rich repeat containing 55##NM_001005210|LRRC55|219527|leucine rich repeat containing 55##BC136737|LRRC55|219527|leucine rich repeat containing 55##BC136739|LRRC55|219527|leucine rich repeat containing 55##BC150572|LRRC55|219527|leucine rich repeat containing 55##BC137198|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##NM_001005323|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##AF441771|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AB051528|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##BC150333|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##NM_033396|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AK124903|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AB209132|SSRP1|6749|structure specific recognition protein 1##BC091486|SSRP1|6749|structure specific recognition protein 1##M86737|SSRP1|6749|structure specific recognition protein 1##NM_003146|SSRP1|6749|structure specific recognition protein 1	0.994151	CTCF.p2:11:0.994
chr20	44651662	44651795	reg1003449.p1	14.782	+	TSC_hg19_v1_chr20_+_44650321 NM_001134771	-1408	+	TSC_hg19_v1_chr20_+_44637546 AK298246 AK301446 AK311648 AK313137 AK316145 J05070 NM_004994 AK303080 BC006093 DQ896791 EU176415 AB528343 CU675241	-14176	+	TSC_hg19_v1_chr20_-_44600992 AK296989	-50735	-	TSC_hg19_v1_chr20_+_44657824 NM_020708 AK098371	6095	+	TSC_hg19_v1_chr20_+_44657861 AK289758 AK296331 AK294059 BC132668 BC132670 AK295096 AF208159 AB033002	6203	+	TSC_hg19_v1_chr20_-_44718529 BC056872	66796	-	NM_001134771|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK298246|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK301446|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK313137|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK316145|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##J05070|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##NM_004994|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK303080|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##BC006093|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##DQ896791|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##EU176415|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK296989|ZNF335|63925|zinc finger protein 335##NM_020708|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK098371|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK289758|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK296331|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK294059|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC132668|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC132670|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK295096|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AF208159|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AB033002|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC056872|NCOA5|57727|nuclear receptor coactivator 5	0.6341	CTCF.p2:-38:0.634
chr14	34308943	34309086	reg1003372.p1	14.781	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-900524	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1510478	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-1762508	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	111135	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	622473	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	699871	-	AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein	0.99957	CTCF.p2:-8:1.000
chr19	10501463	10501599	reg1003675.p1	14.780	+	TSC_hg19_v1_chr19_-_10491245 AK308360 NM_003331 AK303627 AK308379	-10252	-	TSC_hg19_v1_chr19_-_10491192 X54637 AK222672 BC014243	-10340	-	AF340060 AF340061 AB463787 BC040123 S50015 AK309643 BC058903 X69819 TSC_hg19_v1_chr19_-_10450307 AK301071 AX746321 X69711 BC034409 BC046121 AK312826 AK226023 NM_002162	-51222	-	AB463478 AM393285 AM393349 BT006796 CR542249 DQ892174 DQ895369 U43077 TSC_hg19_v1_chr19_-_10514182	12638	-	TSC_hg19_v1_chr19_-_10514219 BC000083 BC008793 U63131	12682	-	TSC_hg19_v1_chr19_-_10514250 NM_007065	12725	-	AK308360|TYK2|7297|tyrosine kinase 2##NM_003331|TYK2|7297|tyrosine kinase 2##AK303627|TYK2|7297|tyrosine kinase 2##AK308379|TYK2|7297|tyrosine kinase 2##X54637|TYK2|7297|tyrosine kinase 2##AK222672|TYK2|7297|tyrosine kinase 2##BC014243|TYK2|7297|tyrosine kinase 2##AF340060|ICAM3|3385|intercellular adhesion molecule 3##AF340061|ICAM3|3385|intercellular adhesion molecule 3##BC040123|ICAM3|3385|intercellular adhesion molecule 3##S50015|ICAM3|3385|intercellular adhesion molecule 3##AK309643|ICAM3|3385|intercellular adhesion molecule 3##BC058903|ICAM3|3385|intercellular adhesion molecule 3##X69819|ICAM3|3385|intercellular adhesion molecule 3##AX746321|ICAM3|3385|intercellular adhesion molecule 3##X69711|ICAM3|3385|intercellular adhesion molecule 3##BC034409|ICAM3|3385|intercellular adhesion molecule 3##BC046121|ICAM3|3385|intercellular adhesion molecule 3##AK312826|ICAM3|3385|intercellular adhesion molecule 3##AK226023|ICAM3|3385|intercellular adhesion molecule 3##NM_002162|ICAM3|3385|intercellular adhesion molecule 3##AM393285|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AM393349|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BT006796|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##CR542249|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ892174|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ895369|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U43077|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC000083|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC008793|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U63131|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##NM_007065|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)	0.99987	CTCF.p2:12:1.000
chr18	77929234	77929369	reg1003980.p1	14.778	+	TSC_hg19_v1_chr18_+_77905812 AK056304	-23434	+	AK292566 TSC_hg19_v1_chr18_+_77867161 AB020670	-62133	+	BC071589 NM_014913	-62387	+	AB044556 AB178535 AB178536 AB527962 TSC_hg19_v1_chr18_-_78005398 BC060797 NM_032510	76058	-	None	None	None	None	None	None	AK056304|LOC100130522|100130522|uncharacterized LOC100130522##AK292566|ADNP2|22850|ADNP homeobox 2##AB020670|ADNP2|22850|ADNP homeobox 2##BC071589|ADNP2|22850|ADNP homeobox 2##NM_014913|ADNP2|22850|ADNP homeobox 2##AB044556|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##AB178535|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##AB178536|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##BC060797|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##NM_032510|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	0.999738	CTCF.p2:-15:1.000
chr1	919658	919785	reg1003730.p1	14.778	+	AL136730 NM_001160184 NM_032129 BC101386 BC101387 AB463180 AM393848 BC141658	-17829	+	TSC_hg19_v1_chr1_+_895963 AK127585 AY423763 NM_198317 BC105742	-23734	+	BC003555 TSC_hg19_v1_chr1_-_894655 NM_015658	-25057	-	AB048791 DQ895490 TSC_hg19_v1_chr1_-_935444	15677	-	BC012351 TSC_hg19_v1_chr1_-_935476 NM_001142467 NM_021170	15789	-	NM_005101 TSC_hg19_v1_chr1_+_948876 M13755 BC009507	29158	+	AL136730|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##NM_001160184|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##NM_032129|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC101386|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC101387|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##AM393848|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC141658|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##AK127585|KLHL17|339451|kelch-like 17 (Drosophila)##AY423763|KLHL17|339451|kelch-like 17 (Drosophila)##NM_198317|KLHL17|339451|kelch-like 17 (Drosophila)##BC105742|KLHL17|339451|kelch-like 17 (Drosophila)##BC003555|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##NM_015658|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AB048791|HES4|57801|hairy and enhancer of split 4 (Drosophila)##DQ895490|HES4|57801|hairy and enhancer of split 4 (Drosophila)##BC012351|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_001142467|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_021170|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_005101|ISG15|9636|ISG15 ubiquitin-like modifier##M13755|ISG15|9636|ISG15 ubiquitin-like modifier##BC009507|ISG15|9636|ISG15 ubiquitin-like modifier	0.999951	CTCF.p2:-15:1.000
chr8	1729545	1729651	reg1001269.p1	14.778	+	TSC_hg19_v1_chr8_+_1712012 BC007725	-17562	+	NM_018941 TSC_hg19_v1_chr8_+_1711937 AK312486 AF123757 AF123758 AF123759 AF123760 AF123761	-17688	+	AF119818 AF119817 NM_004745	-280049	+	TSC_hg19_v1_chr8_+_1772112 AB002292 NM_014629 BC112926 CR749570	42541	+	TSC_hg19_v1_chr8_+_1922078 AB018254 NM_014867	192460	+	TSC_hg19_v1_chr8_+_1949299 AY762229	219652	+	BC007725|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##NM_018941|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AK312486|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123757|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123758|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123759|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123760|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123761|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##AB002292|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##NM_014629|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##BC112926|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##CR749570|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##AB018254|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##NM_014867|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY762229|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11	0.999855	CTCF.p2:-15:1.000
chr11	12258156	12258297	reg1003085.p3	14.777	+	TSC_hg19_v1_chr11_+_12132122 BC044577 NM_014632 BC015755 AB018293	-126096	+	TSC_hg19_v1_chr11_-_12030884 AB057591 NM_013253	-227324	-	TSC_hg19_v1_chr11_-_12030877 AY358378	-227368	-	AK123671 NM_032867	50220	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	140883	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	437737	+	BC044577|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_014632|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##BC015755|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB018293|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB057591|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_013253|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AY358378|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)	0.977197	CTCF.p2:24:0.977
chr12	120794443	120794567	reg1002188.p2	14.777	+	AB464016 EU832774 GQ129318 AK311830 BC005386 BC013384 BC106725 BC106726 M21054 NM_000928	-28932	-	NM_012240 TSC_hg19_v1_chr12_+_120740123 BC034736 AF083109 BC109319 BC109320	-54363	+	TSC_hg19_v1_chr12_-_120703574 NM_001080855 NM_001243756 NM_002859	-90915	-	AB463899 AB012851 NM_002442 TSC_hg19_v1_chr12_-_120806968	12431	-	TSC_hg19_v1_chr12_+_120875920 AK312009 NM_004373 BC107861 BC070186 BC007723 DQ893099 DQ896371	81405	+	U75688 DQ893091 DQ896363 AF161481 AK312006 BC055313 BC002638 NM_016399	89684	-	EU832774|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##GQ129318|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##AK311830|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC005386|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC013384|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106725|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106726|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##M21054|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##NM_000928|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##NM_012240|SIRT4|23409|sirtuin 4##BC034736|SIRT4|23409|sirtuin 4##AF083109|SIRT4|23409|sirtuin 4##BC109319|SIRT4|23409|sirtuin 4##BC109320|SIRT4|23409|sirtuin 4##NM_001080855|PXN|5829|paxillin##NM_001243756|PXN|5829|paxillin##NM_002859|PXN|5829|paxillin##AB012851|MSI1|4440|musashi homolog 1 (Drosophila)##NM_002442|MSI1|4440|musashi homolog 1 (Drosophila)##AK312009|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##NM_004373|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC107861|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC070186|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC007723|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ893099|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ896371|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##U75688|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ893091|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ896363|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AF161481|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AK312006|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC055313|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC002638|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##NM_016399|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1	0.999828	CTCF.p2:1:1.000
chr14	55240843	55240960	reg1002347.p3	14.777	+	NM_001161577 BC021726	-19374	+	TSC_hg19_v1_chr14_+_55168831 AB028976	-72012	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	-206265	+	AY137463 AY137464 AY137465 Z16418 S44049 CR536551 DQ892998 DQ896245 S43856 S44053 TSC_hg19_v1_chr14_-_55369545 Z29433 Z29434 U66095 BC025415 U19523 U66097 NM_000161 NM_001024024 NM_001024070 NM_001024071	128513	-	TSC_hg19_v1_chr14_-_55493780 BC000622 BC005040 AK293005 BC063041	252884	-	TSC_hg19_v1_chr14_-_55493818 BC043349 NM_001008396 NM_007086	252910	-	NM_001161577|SAMD4A|23034|sterile alpha motif domain containing 4A##BC021726|SAMD4A|23034|sterile alpha motif domain containing 4A##AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A##AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##AY137463|GCH1|2643|GTP cyclohydrolase 1##AY137464|GCH1|2643|GTP cyclohydrolase 1##AY137465|GCH1|2643|GTP cyclohydrolase 1##Z16418|GCH1|2643|GTP cyclohydrolase 1##S44049|GCH1|2643|GTP cyclohydrolase 1##CR536551|GCH1|2643|GTP cyclohydrolase 1##DQ892998|GCH1|2643|GTP cyclohydrolase 1##DQ896245|GCH1|2643|GTP cyclohydrolase 1##S43856|GCH1|2643|GTP cyclohydrolase 1##S44053|GCH1|2643|GTP cyclohydrolase 1##Z29433|GCH1|2643|GTP cyclohydrolase 1##Z29434|GCH1|2643|GTP cyclohydrolase 1##U66095|GCH1|2643|GTP cyclohydrolase 1##BC025415|GCH1|2643|GTP cyclohydrolase 1##U19523|GCH1|2643|GTP cyclohydrolase 1##U66097|GCH1|2643|GTP cyclohydrolase 1##NM_000161|GCH1|2643|GTP cyclohydrolase 1##NM_001024024|GCH1|2643|GTP cyclohydrolase 1##NM_001024070|GCH1|2643|GTP cyclohydrolase 1##NM_001024071|GCH1|2643|GTP cyclohydrolase 1##BC000622|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC005040|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##AK293005|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC063041|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC043349|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_001008396|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_007086|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1	0.999596	CTCF.p2:10:1.000
chr6	122851719	122851846	reg1003050.p1	14.777	+	NM_181794 CR749456 AJ420562	-58711	+	CU688532 CU689596 AL137261 TSC_hg19_v1_chr6_-_122792947 AF164794 AB033079 BC014412 BC028607 BC033029 NM_020755 AK075339 AY358429 AK128781 AF087902	-58829	-	TSC_hg19_v1_chr6_+_122720796 AK225593 AK225594 BC112323 M65217 AK294624 BC005329 BC064622 BC121050 BC121051 BC128420 AK316377 AB463722 CU675115 EU446897	-130966	+	NM_032471 NM_181795	79594	+	BC093027 TSC_hg19_v1_chr6_+_122931549 BC036011 AF087873 AK315151	79798	+	NM_001446 TSC_hg19_v1_chr6_+_123100743 BC012299	248917	+	NM_181794|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AJ420562|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AL137261|SERINC1|57515|serine incorporator 1##AF164794|SERINC1|57515|serine incorporator 1##AB033079|SERINC1|57515|serine incorporator 1##BC014412|SERINC1|57515|serine incorporator 1##BC028607|SERINC1|57515|serine incorporator 1##BC033029|SERINC1|57515|serine incorporator 1##NM_020755|SERINC1|57515|serine incorporator 1##AK075339|SERINC1|57515|serine incorporator 1##AY358429|SERINC1|57515|serine incorporator 1##AF087902|SERINC1|57515|serine incorporator 1##AK225593|HSF2|3298|heat shock transcription factor 2##AK225594|HSF2|3298|heat shock transcription factor 2##BC112323|HSF2|3298|heat shock transcription factor 2##M65217|HSF2|3298|heat shock transcription factor 2##AK294624|HSF2|3298|heat shock transcription factor 2##BC005329|HSF2|3298|heat shock transcription factor 2##BC064622|HSF2|3298|heat shock transcription factor 2##BC121050|HSF2|3298|heat shock transcription factor 2##BC121051|HSF2|3298|heat shock transcription factor 2##BC128420|HSF2|3298|heat shock transcription factor 2##AK316377|HSF2|3298|heat shock transcription factor 2##EU446897|HSF2|3298|heat shock transcription factor 2##NM_032471|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_181795|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##BC093027|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##BC036011|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AF087873|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AK315151|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_001446|FABP7|2173|fatty acid binding protein 7, brain##BC012299|FABP7|2173|fatty acid binding protein 7, brain	0.0	
chr2	31556566	31556697	reg1003028.p1	14.776	+	AK294222 TSC_hg19_v1_chr2_+_31456985	-99648	+	AK316006 NM_014600 TSC_hg19_v1_chr2_+_31456952	-99710	+	AK296910 NM_001145122	-116237	-	TSC_hg19_v1_chr2_-_31637569 U39487 D11456 U06117	80940	-	TSC_hg19_v1_chr2_-_31637599 NM_000379	80980	-	EU832809 GQ129244 HQ258121 M74047 EF560740 AK316597 BC112252 BC113641 NM_000348	249372	-	AK294222|EHD3|30845|EH-domain containing 3##AK316006|EHD3|30845|EH-domain containing 3##NM_014600|EHD3|30845|EH-domain containing 3##AK296910|CAPN14|440854|calpain 14##NM_001145122|CAPN14|440854|calpain 14##U39487|XDH|7498|xanthine dehydrogenase##D11456|XDH|7498|xanthine dehydrogenase##U06117|XDH|7498|xanthine dehydrogenase##NM_000379|XDH|7498|xanthine dehydrogenase##EU832809|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##GQ129244|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##HQ258121|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##M74047|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##EF560740|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##AK316597|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC112252|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC113641|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000348|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)	0.98826	CTCF.p2:1:0.988
chr9	127615410	127615574	reg1001929.p2	14.776	+	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	-75992	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	-81982	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	-194788	+	BC150645 BC171828 BC171830 BC171837 BC127949 TSC_hg19_v1_chr9_+_127615749 NM_001045476	232	+	TSC_hg19_v1_chr9_-_127624226 BC071915 U12465 BC000348 AK291072 BC010919 D28448 NM_007209	8725	-	TSC_hg19_v1_chr9_+_127624397 AK056174	8902	+	AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A##HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##BC150645|WDR38|401551|WD repeat domain 38##BC171828|WDR38|401551|WD repeat domain 38##BC171830|WDR38|401551|WD repeat domain 38##BC171837|WDR38|401551|WD repeat domain 38##BC127949|WDR38|401551|WD repeat domain 38##NM_001045476|WDR38|401551|WD repeat domain 38##BC071915|RPL35|11224|ribosomal protein L35##U12465|RPL35|11224|ribosomal protein L35##BC000348|RPL35|11224|ribosomal protein L35##AK291072|RPL35|11224|ribosomal protein L35##BC010919|RPL35|11224|ribosomal protein L35##D28448|RPL35|11224|ribosomal protein L35##NM_007209|RPL35|11224|ribosomal protein L35##AK056174|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like	0.998022	CTCF.p2:4:0.998
chr11	6464766	6464895	reg1003946.p1	14.775	+	X02537 J03048 AK303758 AK313648 TSC_hg19_v1_chr11_-_6462218 BC005395 NM_000613	-2639	-	AK297544 BC010854 NM_145689 TSC_hg19_v1_chr11_-_6440647	-24190	-	TSC_hg19_v1_chr11_-_6440299 AK293452 AF394214 L77864 NM_001164 AK293613 AK294495 AK311725	-24507	-	AK299586 AK311127 TSC_hg19_v1_chr11_-_6495154 AK298843 AK126685 BC096827 NM_001248007 NM_006458 NM_033278	30301	-	AK291396 NM_001248006	30858	-	U52522 AK310833 BC000392 AK026390 TSC_hg19_v1_chr11_-_6502554 AK311086	37713	-	X02537|HPX|3263|hemopexin##J03048|HPX|3263|hemopexin##AK303758|HPX|3263|hemopexin##AK313648|HPX|3263|hemopexin##BC005395|HPX|3263|hemopexin##NM_000613|HPX|3263|hemopexin##AK297544|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##BC010854|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_145689|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK293452|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AF394214|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##L77864|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_001164|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK293613|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK294495|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK311725|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK299586|TRIM3|10612|tripartite motif containing 3##AK311127|TRIM3|10612|tripartite motif containing 3##AK298843|TRIM3|10612|tripartite motif containing 3##AK126685|TRIM3|10612|tripartite motif containing 3##BC096827|TRIM3|10612|tripartite motif containing 3##NM_001248007|TRIM3|10612|tripartite motif containing 3##NM_006458|TRIM3|10612|tripartite motif containing 3##NM_033278|TRIM3|10612|tripartite motif containing 3##AK291396|TRIM3|10612|tripartite motif containing 3##NM_001248006|TRIM3|10612|tripartite motif containing 3##U52522|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK310833|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##BC000392|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK026390|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK311086|ARFIP2|23647|ADP-ribosylation factor interacting protein 2	0.972799	CTCF.p2:-3:0.973
chr18	55549159	55549290	reg1003588.p1	14.775	+	TSC_hg19_v1_chr18_-_55470548 NM_005603	-78754	-	NM_001242804 BC040476	-251667	+	TSC_hg19_v1_chr18_-_55289034 AK293985 NM_004539	-260123	-	TSC_hg19_v1_chr18_+_55711515 NM_001144967 NM_001243960 NM_015277	162312	+	TSC_hg19_v1_chr18_+_55711771 AB071179	162560	+	DQ890913 DQ893350 AY312514 TSC_hg19_v1_chr18_+_55711911	162682	+	NM_005603|ATP8B1|5205|ATPase, aminophospholipid transporter, class I, type 8B, member 1##NM_001242804|LOC100505549|100505549|uncharacterized LOC100505549##BC040476|LOC100505549|100505549|uncharacterized LOC100505549##AK293985|NARS|4677|asparaginyl-tRNA synthetase##NM_004539|NARS|4677|asparaginyl-tRNA synthetase##NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001243960|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB071179|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.516385	CTCF.p2:-7:0.516
chr4	110971232	110971367	reg1003101.p1	14.775	+	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-137252	+	AK126648 NM_198506	-198814	+	NM_006583 BC128120 BC128121 BC128401	-222146	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	148486	-	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	426074	+	AK313987 TSC_hg19_v1_chr4_-_111543909	572611	-	AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK126648|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_198506|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313987|PITX2|5308|paired-like homeodomain 2	0.540154	CTCF.p2:-11:0.540
chr5	150695693	150695813	reg1002323.p2	14.774	+	AK127978 NM_001145017 NM_181774	-12424	-	NM_000405 NM_001167607 TSC_hg19_v1_chr5_+_150632745 AK225978 L01439 M76477 AK312494 X62078 AK298867 BC009273 X61095 CU679281 DQ891914 DQ895098 X16087	-63038	+	TSC_hg19_v1_chr5_-_150603654 AK292841 AK298063 AL713742 NM_015621	-92073	-	BC101100 BC101101 BC101102 BC101103 AK297682 AY162214 AK122630 AK309575 NM_181776	31366	-	TSC_hg19_v1_chr5_+_150827163 NM_078483 BX537963 AY227111	131407	+	AK309323 TSC_hg19_v1_chr5_+_150827187	131436	+	AK127978|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_001145017|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_181774|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_000405|GM2A|2760|GM2 ganglioside activator##NM_001167607|GM2A|2760|GM2 ganglioside activator##L01439|GM2A|2760|GM2 ganglioside activator##M76477|GM2A|2760|GM2 ganglioside activator##AK312494|GM2A|2760|GM2 ganglioside activator##X62078|GM2A|2760|GM2 ganglioside activator##AK298867|GM2A|2760|GM2 ganglioside activator##BC009273|GM2A|2760|GM2 ganglioside activator##X61095|GM2A|2760|GM2 ganglioside activator##DQ891914|GM2A|2760|GM2 ganglioside activator##DQ895098|GM2A|2760|GM2 ganglioside activator##X16087|GM2A|2760|GM2 ganglioside activator##AK292841|CCDC69|26112|coiled-coil domain containing 69##AK298063|CCDC69|26112|coiled-coil domain containing 69##AL713742|CCDC69|26112|coiled-coil domain containing 69##NM_015621|CCDC69|26112|coiled-coil domain containing 69##BC101100|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101101|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101102|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101103|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK297682|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AY162214|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK309575|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##NM_181776|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##NM_078483|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BX537963|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AY227111|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AK309323|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1	0.972098	CTCF.p2:5:0.972
chr9	139379596	139379711	reg1002742.p1	14.774	+	TSC_hg19_v1_chr9_-_139378220 AB593115	-1411	-	BC036221 NM_152571 AK055336	-1683	+	TSC_hg19_v1_chr9_-_139377505 AB002308 NM_014866	-2149	-	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	60597	-	NM_016215 AL512735 AY358903 BC088371 AY358902	177748	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	180562	+	AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##AB002308|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##NM_014866|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7	0.969959	CTCF.p2:-4:0.970
chr1	183250724	183250876	reg1002287.p2	14.772	+	TSC_hg19_v1_chr1_+_183155398 AK296944 X73902 BC112286 BC113378 BC143653	-95381	+	AK307945 Z15008 Z15009 TSC_hg19_v1_chr1_+_183155386	-95427	+	NM_005562 NM_018891 TSC_hg19_v1_chr1_+_183155211	-95608	+	BC020998 NM_170706	23208	-	AB383893 TSC_hg19_v1_chr1_-_183387486	136649	-	AB007948 TSC_hg19_v1_chr1_-_183387507 AK291390 NM_015039 AF288395	136818	-	AK296944|LAMC2|3918|laminin, gamma 2##X73902|LAMC2|3918|laminin, gamma 2##BC112286|LAMC2|3918|laminin, gamma 2##BC113378|LAMC2|3918|laminin, gamma 2##BC143653|LAMC2|3918|laminin, gamma 2##AK307945|LAMC2|3918|laminin, gamma 2##Z15008|LAMC2|3918|laminin, gamma 2##Z15009|LAMC2|3918|laminin, gamma 2##NM_005562|LAMC2|3918|laminin, gamma 2##NM_018891|LAMC2|3918|laminin, gamma 2##BC020998|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##NM_170706|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AB007948|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AK291390|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##NM_015039|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AF288395|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	0.99663	CTCF.p2:-11:0.997
chr10	64353896	64354032	reg1001935.p1	14.771	+	AJ505150 NM_199452	-73758	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-219921	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-325425	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	210578	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	210693	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	222133	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.923053	CTCF.p2:-3:0.923
chr1	26648124	26648273	reg1003281.p1	14.771	+	NM_145345 AK097368	-3394	-	TSC_hg19_v1_chr1_+_26644458 BC000644 X62466 X67699 BT007116 CR456874	-3715	+	TSC_hg19_v1_chr1_+_26644396 NM_001803 AK311554	-3798	+	AK000902 NM_001039775	32422	-	BC028731 BC029505 NM_001114759 NM_173574	51047	-	TSC_hg19_v1_chr1_+_26737262 BC028566 NM_024674	89053	+	NM_145345|UBXN11|91544|UBX domain protein 11##AK097368|UBXN11|91544|UBX domain protein 11##BC000644|CD52|1043|CD52 molecule##X62466|CD52|1043|CD52 molecule##X67699|CD52|1043|CD52 molecule##BT007116|CD52|1043|CD52 molecule##CR456874|CD52|1043|CD52 molecule##NM_001803|CD52|1043|CD52 molecule##AK000902|AIM1L|55057|absent in melanoma 1-like##NM_001039775|AIM1L|55057|absent in melanoma 1-like##BC028731|ZNF683|257101|zinc finger protein 683##BC029505|ZNF683|257101|zinc finger protein 683##NM_001114759|ZNF683|257101|zinc finger protein 683##NM_173574|ZNF683|257101|zinc finger protein 683##BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)##NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)	0.951097	CTCF.p2:19:0.951
chr22	37713011	37713143	reg1003349.p1	14.771	+	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	-34501	+	TSC_hg19_v1_chr22_+_37678548 AK304453 BC017780	-34540	+	AF125349 AF075458 NM_013385 TSC_hg19_v1_chr22_+_37678513	-34609	+	TSC_hg19_v1_chr22_-_37823515 NM_052906	110451	-	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	169268	-	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	202230	-	BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4##AK304453|CYTH4|27128|cytohesin 4##BC017780|CYTH4|27128|cytohesin 4##AF125349|CYTH4|27128|cytohesin 4##AF075458|CYTH4|27128|cytohesin 4##NM_013385|CYTH4|27128|cytohesin 4##NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2##CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10	0.814873	CTCF.p2:-7:0.815
chr11	120823624	120823745	reg1003134.p1	14.770	+	AB384776 NM_014619 S67803	-292657	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-441219	+	BC063117 NM_001198665 NM_015313	-616067	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	71126	+	NM_005422	149690	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	339721	+	NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.958261	CTCF.p2:28:0.958
chr5	116283732	116283865	reg1002075.p2	14.770	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-373284	-	TSC_hg19_v1_chr5_+_115898220 D28352	-385574	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-863077	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2040440	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2123013	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2123367	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.999863	CTCF.p2:1:1.000
chr7	75649528	75649672	reg1002886.p1	14.770	+	TSC_hg19_v1_chr7_-_75623977 BC051850 NM_031925	-25613	-	TSC_hg19_v1_chr7_-_75623944 BC029487 AF327923	-25656	-	CU688670 CU690864 DQ891002 DQ894180 BC040694 TSC_hg19_v1_chr7_-_75623914	-25694	-	TSC_hg19_v1_chr7_-_75677306 AK308828 BC024035 AK308912 BX537896	27688	-	TSC_hg19_v1_chr7_-_75677323 AF069762 NM_016086	27735	-	TSC_hg19_v1_chr7_+_75677368 AF047470 NM_005918	27778	+	BC051850|TMEM120A|83862|transmembrane protein 120A##NM_031925|TMEM120A|83862|transmembrane protein 120A##BC029487|TMEM120A|83862|transmembrane protein 120A##AF327923|TMEM120A|83862|transmembrane protein 120A##DQ891002|TMEM120A|83862|transmembrane protein 120A##DQ894180|TMEM120A|83862|transmembrane protein 120A##BC040694|TMEM120A|83862|transmembrane protein 120A##AK308828|STYXL1|51657|serine/threonine/tyrosine interacting-like 1##BC024035|STYXL1|51657|serine/threonine/tyrosine interacting-like 1##BX537896|STYXL1|51657|serine/threonine/tyrosine interacting-like 1##AF069762|STYXL1|51657|serine/threonine/tyrosine interacting-like 1##NM_016086|STYXL1|51657|serine/threonine/tyrosine interacting-like 1##AF047470|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##NM_005918|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)	0.859357	CTCF.p2:25:0.859
chr3	396153	396290	reg1003844.p1	14.769	+	NM_001253388 BC104918 BC143496 BC143498 AB384920	-34809	+	TSC_hg19_v1_chr3_+_239671 AK055236	-156550	+	TSC_hg19_v1_chr3_+_238541 AF002246	-157629	+	AK126307 TSC_hg19_v1_chr3_+_577916	181694	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	738442	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	1744340	+	NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK055236|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AF002246|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4	0.991574	CTCF.p2:11:0.992
chr2	242893083	242893210	reg1001442.p1	14.767	+	AK090909 AX746675 BC113517 BC113519 NM_173821	-81264	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	-92122	-	AK091038 AX746745 NM_001167599 NM_001167602 NM_080741 BC012899	-141096	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	137713	+	None	None	None	None	None	None	AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1##AK091038|NEU4|129807|sialidase 4##NM_001167599|NEU4|129807|sialidase 4##NM_001167602|NEU4|129807|sialidase 4##NM_080741|NEU4|129807|sialidase 4##BC012899|NEU4|129807|sialidase 4##AK298283|LOC728323|728323|uncharacterized LOC728323	0.914965	CTCF.p2:-11:0.915
chr10	44185635	44185756	reg1002677.p1	14.766	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-41389	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-41490	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-83798	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	694804	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	1221023	+	AK056518 TSC_hg19_v1_chr10_-_45455156	1269452	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	1.01365	CTCF.p2:-8:0.994
chr3	194054604	194054747	reg1003666.p1	14.766	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	-200720	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	-200742	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-743510	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	17399	-	BC101064 BC101065 TSC_hg19_v1_chr3_-_194090471 AK125112 NM_001135057 NM_130830	35792	-	NM_004488	65319	-	AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2##BC101064|LRRC15|131578|leucine rich repeat containing 15##BC101065|LRRC15|131578|leucine rich repeat containing 15##AK125112|LRRC15|131578|leucine rich repeat containing 15##NM_001135057|LRRC15|131578|leucine rich repeat containing 15##NM_130830|LRRC15|131578|leucine rich repeat containing 15##NM_004488|GP5|2814|glycoprotein V (platelet)	0.998918	CTCF.p2:-12:0.999
chr2	131631412	131631539	reg1003518.p1	14.765	+	TSC_hg19_v1_chr2_+_131513793 NM_001105194 NM_001105195	-117653	+	AK289525 NM_152698 AK095696 AK291424 BC113445 BC113447 BC143806 NM_001105193	-118360	+	BC105013 BC105041 NM_207364 AY569570 AY280965	-144792	+	AF249745 NM_015320 NM_032995	42748	+	TSC_hg19_v1_chr2_-_131851008 BC066347 BC110642 NM_001009993	219523	-	AK126289 NM_001100623 NM_017958	230944	+	NM_001105194|FAM123C|205147|family with sequence similarity 123C##NM_001105195|FAM123C|205147|family with sequence similarity 123C##AK289525|FAM123C|205147|family with sequence similarity 123C##NM_152698|FAM123C|205147|family with sequence similarity 123C##AK095696|FAM123C|205147|family with sequence similarity 123C##AK291424|FAM123C|205147|family with sequence similarity 123C##BC113445|FAM123C|205147|family with sequence similarity 123C##BC113447|FAM123C|205147|family with sequence similarity 123C##BC143806|FAM123C|205147|family with sequence similarity 123C##NM_001105193|FAM123C|205147|family with sequence similarity 123C##BC105013|GPR148|344561|G protein-coupled receptor 148##BC105041|GPR148|344561|G protein-coupled receptor 148##NM_207364|GPR148|344561|G protein-coupled receptor 148##AY569570|GPR148|344561|G protein-coupled receptor 148##AY280965|GPR148|344561|G protein-coupled receptor 148##AF249745|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##NM_015320|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##NM_032995|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##BC066347|FAM168B|130074|family with sequence similarity 168, member B##BC110642|FAM168B|130074|family with sequence similarity 168, member B##NM_001009993|FAM168B|130074|family with sequence similarity 168, member B##AK126289|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_001100623|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_017958|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2	0.993624	CTCF.p2:-4:0.994
chr11	94802960	94803076	reg1002212.p1	14.763	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-2610	+	TSC_hg19_v1_chr11_+_94800329 BC057783 BC006181	-2674	+	NM_032102 AK309776 AK312514 AK023379 TSC_hg19_v1_chr11_+_94800281	-2850	+	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	19994	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	161286	-	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	719633	-	AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8##NM_032102|SRSF8|10929|serine/arginine-rich splicing factor 8##AK312514|SRSF8|10929|serine/arginine-rich splicing factor 8##AK023379|SRSF8|10929|serine/arginine-rich splicing factor 8##AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B	0.980023	CTCF.p2:3:0.980
chr17	56190510	56190638	reg1002346.p2	14.763	+	TSC_hg19_v1_chr17_+_56160779 AK312125 NM_080677 BC010744	-29789	+	CR936603 TSC_hg19_v1_chr17_-_56160667	-29957	-	TSC_hg19_v1_chr17_-_56084656 NM_001078166 NM_006924	-105893	-	BC136589 BC136595 NM_012374	41929	+	AB463963 NM_001004707	56441	+	TSC_hg19_v1_chr17_+_56270086 NM_000502 AB527137 X14346	79599	+	AK312125|DYNLL2|140735|dynein, light chain, LC8-type 2##NM_080677|DYNLL2|140735|dynein, light chain, LC8-type 2##BC010744|DYNLL2|140735|dynein, light chain, LC8-type 2##NM_001078166|SRSF1|6426|serine/arginine-rich splicing factor 1##NM_006924|SRSF1|6426|serine/arginine-rich splicing factor 1##BC136589|OR4D1|26689|olfactory receptor, family 4, subfamily D, member 1##BC136595|OR4D1|26689|olfactory receptor, family 4, subfamily D, member 1##NM_012374|OR4D1|26689|olfactory receptor, family 4, subfamily D, member 1##NM_001004707|OR4D2|124538|olfactory receptor, family 4, subfamily D, member 2##NM_000502|EPX|8288|eosinophil peroxidase##X14346|EPX|8288|eosinophil peroxidase	0.963421	CTCF.p2:8:0.963
chr19	48837238	48837363	reg1001688.p1	14.763	+	TSC_hg19_v1_chr19_+_48828847 BC009718 U52101	-8466	+	TSC_hg19_v1_chr19_+_48828629 NM_001425 U87947	-8660	+	TSC_hg19_v1_chr19_-_48825152 AK128144	-12130	-	TSC_hg19_v1_chr19_-_48867198 BC004363 BC040021 AY358161 BC016919 NM_018273 AK001784 AK291521 AK294408 AK297591 AK297610 AK298317 AK129801 AK303635	29969	-	NM_012451 BC106891	30409	+	CU676330 DQ891992 DQ895182 TSC_hg19_v1_chr19_-_48894672	57344	-	BC009718|EMP3|2014|epithelial membrane protein 3##U52101|EMP3|2014|epithelial membrane protein 3##NM_001425|EMP3|2014|epithelial membrane protein 3##U87947|EMP3|2014|epithelial membrane protein 3##AK128144|CCDC114|93233|coiled-coil domain containing 114##BC040021|TMEM143|55260|transmembrane protein 143##AY358161|TMEM143|55260|transmembrane protein 143##BC016919|TMEM143|55260|transmembrane protein 143##NM_018273|TMEM143|55260|transmembrane protein 143##AK291521|TMEM143|55260|transmembrane protein 143##AK294408|TMEM143|55260|transmembrane protein 143##AK297591|TMEM143|55260|transmembrane protein 143##AK297610|TMEM143|55260|transmembrane protein 143##AK298317|TMEM143|55260|transmembrane protein 143##AK129801|TMEM143|55260|transmembrane protein 143##AK303635|TMEM143|55260|transmembrane protein 143##NM_012451|SYNGR4|23546|synaptogyrin 4##BC106891|SYNGR4|23546|synaptogyrin 4##DQ891992|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##DQ895182|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	0.410784	CTCF.p2:-10:0.388
chr11	111435993	111436141	reg1002706.p1	14.762	+	TSC_hg19_v1_chr11_-_111412453 AK096925	-23619	-	AY358554 TSC_hg19_v1_chr11_+_111411485 AK055654 AK296231 BC025407 AK298165	-24612	+	AK055539 NM_178834	-24835	+	TSC_hg19_v1_chr11_+_111473176 NM_015191 AK291233 AL136764 AB018324 AB096248 AK000396 BC113459 BC117183 AB084424	37166	+	M65254 TSC_hg19_v1_chr11_-_111637059	200963	-	AB384965 DQ890606 DQ894107 EU176538 AK292275 AK293388 AK294716 TSC_hg19_v1_chr11_-_111637114 BC027596 AK296455 AK301705 AF087438 AF163473 NM_001177562 NM_001177563 NM_002716 NM_181699 NM_181700	201059	-	AY358554|LAYN|143903|layilin##AK055654|LAYN|143903|layilin##AK296231|LAYN|143903|layilin##BC025407|LAYN|143903|layilin##AK298165|LAYN|143903|layilin##AK055539|LAYN|143903|layilin##NM_178834|LAYN|143903|layilin##NM_015191|SIK2|23235|salt-inducible kinase 2##AK291233|SIK2|23235|salt-inducible kinase 2##AL136764|SIK2|23235|salt-inducible kinase 2##AB018324|SIK2|23235|salt-inducible kinase 2##AB096248|SIK2|23235|salt-inducible kinase 2##AK000396|SIK2|23235|salt-inducible kinase 2##BC113459|SIK2|23235|salt-inducible kinase 2##BC117183|SIK2|23235|salt-inducible kinase 2##AB084424|SIK2|23235|salt-inducible kinase 2##M65254|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##DQ890606|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##DQ894107|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##EU176538|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK292275|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK293388|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK294716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##BC027596|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK296455|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK301705|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF087438|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF163473|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177562|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177563|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_002716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181699|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181700|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta	0.999811	CTCF.p2:-9:1.000
chr8	6637228	6637347	reg1002086.p1	14.759	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	-71104	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	-71347	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	-71396	+	AY534243 AY358489 AY534242 NM_207411	55805	-	BC033298 BC047677 X92744 U73945 NM_005218	98196	-	M98331 BC093951 BC093953 BC069667 BC069710 BC069728 BC069769 NM_001926	146298	-	AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AY534243|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY358489|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY534242|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##NM_207411|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##BC033298|DEFB1|1672|defensin, beta 1##BC047677|DEFB1|1672|defensin, beta 1##X92744|DEFB1|1672|defensin, beta 1##U73945|DEFB1|1672|defensin, beta 1##NM_005218|DEFB1|1672|defensin, beta 1##M98331|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093951|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093953|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069667|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069710|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069728|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069769|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##NM_001926|DEFA6|1671|defensin, alpha 6, Paneth cell-specific	0.995409	CTCF.p2:17:0.995
chr11	32073806	32073941	reg1002626.p1	14.758	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-234395	-	AB209177 TSC_hg19_v1_chr11_-_31832871 BX640762 NM_000280 NM_001604	-241004	-	BC011953 TSC_hg19_v1_chr11_-_31832790	-241086	-	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	38604	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	38826	+	AK093168 BC032861 NM_001198551 NM_001198552	378487	-	AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AB209177|PAX6|5080|paired box 6##BX640762|PAX6|5080|paired box 6##NM_000280|PAX6|5080|paired box 6##NM_001604|PAX6|5080|paired box 6##BC011953|PAX6|5080|paired box 6##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1	0.99761	CTCF.p2:-5:0.998
chr11	61153147	61153289	reg1002962.p2	14.754	+	TSC_hg19_v1_chr11_+_61129845 AK027724 AK307371 AF151030 AK303219 BC005201 AF151032	-23364	+	TSC_hg19_v1_chr11_-_61129735 BC014045 BC004391 AK056751 NM_001161454 NM_153611	-23568	-	TSC_hg19_v1_chr11_+_61129442 NM_016464	-23645	+	TSC_hg19_v1_chr11_+_61160064 AK303687 NM_001173990 NM_001173991 NM_016499 BC011010	6734	+	TSC_hg19_v1_chr11_+_61160103 AF151078	6891	+	BC018135 TSC_hg19_v1_chr11_-_61197448 NM_024811 AK096343 AK294578 AL833332 BX537888 AL832667	44145	-	AK027724|TMEM138|51524|transmembrane protein 138##AK307371|TMEM138|51524|transmembrane protein 138##AF151030|TMEM138|51524|transmembrane protein 138##AK303219|TMEM138|51524|transmembrane protein 138##BC005201|TMEM138|51524|transmembrane protein 138##AF151032|TMEM138|51524|transmembrane protein 138##BC014045|CYBASC3|220002|cytochrome b, ascorbate dependent 3##BC004391|CYBASC3|220002|cytochrome b, ascorbate dependent 3##AK056751|CYBASC3|220002|cytochrome b, ascorbate dependent 3##NM_001161454|CYBASC3|220002|cytochrome b, ascorbate dependent 3##NM_153611|CYBASC3|220002|cytochrome b, ascorbate dependent 3##NM_016464|TMEM138|51524|transmembrane protein 138##AK303687|TMEM216|51259|transmembrane protein 216##NM_001173990|TMEM216|51259|transmembrane protein 216##NM_001173991|TMEM216|51259|transmembrane protein 216##NM_016499|TMEM216|51259|transmembrane protein 216##BC011010|TMEM216|51259|transmembrane protein 216##AF151078|TMEM216|51259|transmembrane protein 216##BC018135|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##NM_024811|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK096343|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK294578|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AL833332|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##BX537888|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AL832667|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa	0.998174	CTCF.p2:9:0.998
chr14	106829436	106829547	reg1002573.p2	14.754	+	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 AF044420 AF044422 AF044425 AF044427 AF044442 AF090355 AF099201 AF174074 AF471431 AJ132850 AJ271549 AJ300787 AJ300793 AJ300798 AJ300803 AJ308463 AJ633622 AJ633623 AY028777 AY033265 AY033266 AY033267 AY530317 AY554176 AY640472 AY640475 AY640477 AY640483 AY640501 AY640511 AY640535 AY640539 AY640541 AY640544 AY640549 AY640550 AY640557 AY640558 AY640561 AY640568 AY640569 AY640573 AY640577 AY685306 AY781859 AY846266 AY846267 AY866744 AY941844 AY941856 AY941857 AY941860 AY941863 AY941865 AY941866 AY941868 AY941892 AY941896 AY941898 AY941901 AY941907 AY941913 AY941935 AY941942 AY941950 AY941953 AY941968 AY941970 AY941982 AY941983 AY941985 AY941986 AY941988 AY941989 AY944708 AY944716 AY971015 AY971027 AY971037 AY971078 AY971081 AY971115 AY971120 AY971130 AY971135 DQ065629 DQ065669 DQ065674 DQ065689 DQ065692 DQ065718 DQ065725 DQ431499 DQ431621 DQ431627 DQ840705 DQ840715 DQ840744 DQ926087 DQ926091 DQ926150 DQ926207 DQ926222 DQ926372 DQ926388 DQ926512 DQ926569 DQ926578 DQ926634 EF177978 EF178004 EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 AY866854 AY882579 AY927661 AY941847 AY941848 AY941861 AY941864 AY941867 AY941869 AY941871 AY941872 AY941874 AY941875 AY941893 AY941894 AY941895 AY941897 AY941904 AY941908 AY941922 AY941932 AY941933 AY941934 AY941944 AY941946 AY941951 AY941954 AY941956 AY941963 AY941964 AY941966 AY941967 AY941969 AY944690 AY971127 D83678 D83681 D83684 D83685 D83694 DQ005284 DQ065696 DQ100659 DQ100685 DQ100775 DQ100819 DQ100846 DQ100857 DQ100907 DQ100930 DQ212508 DQ212509 DQ431475 DQ431476 DQ431501 DQ431573 DQ431575 DQ431576 DQ431580 DQ431582 DQ431606 DQ431607 DQ431622 DQ431628 DQ431633 DQ431634 DQ431637 DQ431642 DQ431643 DQ431646 DQ431653 DQ431658 DQ535263 DQ535266 DQ535268 DQ535293 DQ535308 DQ535373 DQ535382 DQ535397 DQ535424 DQ535426 DQ535429 DQ535437 DQ535439 DQ535440 DQ535461 DQ535466 DQ840703 DQ840706 DQ840712 DQ840713 DQ840745 DQ840782 DQ840813 DQ923052 DQ926032 DQ926064 DQ926133 DQ926340 DQ926374 DQ926384 DQ926552 EF177969 EF177975 EF177991 EF178015 EF178075 EF178091 EF178098 EF178099 EF221755 EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	-38197	-	U32154 AF460767 DQ524080 DQ454738 Y08403 HM774396 AF103161 AJ245070 AY866645 AM233757 AY670731 DQ005273 AB063909 AB363132 AJ556745 AY670715 AY670719 AY670726 AY670727 AY670745 AY670770 AY670773 AY670784 AY670819 AY670831 AY670837 AY670857 AY671081 AY671102 AY671324 AY671379 AY671400 AY671500 AY671586 AY671639 AY671641 AY671703 AY671775 AY671785 AY781815 AY781827 AY866636 DQ065711 DQ926028 DQ926188 DQ926206 FJ492934 AJ430733 EF178114 FJ385294 HM152518 AY392953 L28053 AY671012 AY671034 AY671045 AY671152 AY671174 AY671714 AY671721 L03677 Z75396 Z75404 L23570 BC073765 AK130813 AK301332 AK130585 AK128579 AK128568 AK129620 TSC_hg19_v1_chr14_-_106781004	-48721	-	AJ305231 DQ118259 HM774835 DQ926094 AY866678 EU794438 Z80845 BC087841 TSC_hg19_v1_chr14_-_106774560	-55056	-	AF460708 AF460709 AF460785 AY003807 AY003817 DQ454548 M33859 M33860 DQ454427 DQ454852 DQ454425 DQ454627 DQ454856 GU552743 DQ454416 DQ454458 GQ232904 GU552731 GU552736 AY003787 AF017463 GU552721 GU552724 GU552725 GU552726 GU552727 GU552728 GU552729 GU552730 AY003850 DQ454418 DQ454671 GQ232774 DQ454432 DQ454433 DQ454901 DQ454979 DQ454980 GQ232865 HM995239 JF810276 AY003855 DQ454422 DQ454434 DQ454622 DQ454870 DQ523887 HM116153 HM116169 HM116182 Z30552 Z30557 Z30561 Z30562 Z30573 Z30576 Z30578 Z30580 Z30581 Z30591 Z30599 Z30674 Z30675 Z30677 DQ454531 DQ454860 DQ454903 EU099089 AF004937 AY003796 AY003804 DQ454392 DQ454610 DQ454833 EU620002 FJ840008 FJ840011 FJ840012 FJ840020 FJ840055 FJ874002 FJ874054 FJ874065 FJ874072 FJ874075 FJ874095 HM116113 HM116114 HM116155 HM116159 HM116160 HM116168 HM116177 HM116195 HM116199 HM116226 AF017459 AF017460 EU619988 AJ487490 AY003825 AJ253061 EU350428 DQ454982 X75022 EF091922 EF175396 EF175402 EF407849 EF441754 GU358660 JF810277 GQ232847 GQ232867 GQ232891 GQ232893 GQ232895 GQ232896 GQ232900 GQ232901 GQ232902 DQ454645 EU099068 EU099071 AF103299 EU090244 EU099076 EU099098 HQ392881 HQ392885 HQ392917 AJ253080 EU099079 EU099096 EU099156 EU099191 EU099252 AJ253066 AM183974 AM183975 AM183976 AM183977 AM183978 AM183995 AF484411 AF103180 AJ253083 AF103278 EF624236 AJ240558 AJ253067 S79918 AJ253059 AJ253072 AJ253074 AJ253079 AJ253081 AJ253082 AJ253084 AJ253087 AJ253088 AJ253089 AJ253090 AJ253091 AJ253092 AJ253093 AJ253094 AJ253095 AJ253098 AJ253102 AJ253103 AJ253104 AJ253108 AJ253109 AJ253110 AJ253112 AJ240555 AJ240556 AJ240557 AJ240560 AJ240561 AJ240566 AJ240574 AJ240575 AJ240576 AJ240577 AJ240580 AJ240581 AJ240590 AJ240595 AJ240604 AJ253044 AJ253050 AJ253054 AJ253077 AJ253085 AY671386 HM996508 Y17927 Y17928 Y17930 Y17931 Y17932 Y17933 Y17934 Y17943 Y17944 Y17945 Y17947 Y17948 Y17949 AY998719 DQ100788 DQ100796 JN110760 JN110800 JN110847 FJ385331 FJ385337 FJ385351 FJ385378 HM774705 HM774878 AF103173 AY193818 EU146315 EU146358 EU146377 EU146394 U21257 U21267 U21268 HM774736 AJ222555 HM995235 X87438 AJ222547 AJ222548 AJ222549 AJ222550 AJ222552 AJ222556 AJ222557 AJ222558 AJ222559 AJ222560 AJ222561 AJ222562 AJ222563 AJ222564 AJ222565 AJ222566 AJ222567 AJ222568 AJ222569 AJ222570 AJ222571 AJ222573 AJ222574 AJ222575 AJ222576 AJ222577 AJ222578 Z46300 Z46301 Z46302 Z46315 Z46316 Z46317 Z46318 Z46319 Z46320 Z46321 Z46322 Z46323 Z46324 Z46325 Z46326 Z46327 Z46328 Z46329 Z46330 Z46331 Z46332 Z46333 Z46334 Z46335 Z46336 Z46337 Z46338 Z46339 Z49139 AJ244942 AJ579251 X64156 X64159 AB063716 AJ244940 AJ279524 AJ279537 AJ556751 AJ579178 AY268371 DQ523935 DQ523975 DQ523980 DQ523984 DQ523987 DQ523990 DQ524003 DQ524006 DQ524007 DQ524018 DQ524044 DQ524065 DQ524068 DQ524074 DQ524077 AB067135 AB067136 AJ244997 AM233792 AM233793 AM233795 AM233801 DQ926349 DQ926350 L34163 X64235 AJ300804 AY670741 AY670790 AY670791 AY670810 AY670816 HM994959 HM995182 HM995183 HM995184 HM995185 HM995187 HM995189 HM995203 HM995204 HM995205 HM995206 HM995207 HM995211 HM995216 HM995244 HM995246 HM995249 HM995308 HM995310 HM995472 HM995477 HM995479 HM995481 HM995550 HM995553 HM995554 HM995743 HM995982 HM996230 HM996238 HM996535 AB063661 AB063671 AB063674 AB066914 AB066915 AB066916 AB066917 AB066918 AB066919 AB066920 AB066921 AB066923 AB066924 AB067034 AB067035 AB067036 AB067037 AB067038 AB067039 AB067040 AB067041 AB067044 AB067046 AB067049 AB067052 AB067053 AB067054 AB067055 AB067056 AB067057 AB067058 AB067059 AB067060 AB067064 AB067066 AB067067 AB067068 AB067084 AB067085 AB067088 AB067089 AB067090 AB067091 AB067092 AB067093 AB067132 AB067133 AB067134 AB067137 AB067142 AB067143 AB067144 AB067145 AB067146 AB067148 AB067149 AB067151 AB110646 AB363152 AB363153 AB363154 AF021948 AF021957 AF021990 AF021991 AF021997 AF022004 AF022005 AF052527 AF062104 AF062113 AF062231 AF062234 AF107233 AF107239 AF107241 AF174041 AF174049 AF174054 AF174085 AF174086 AF174088 AF245309 AF262072 AF262097 AF262100 AF262125 AF262174 AF372845 AJ239335 AJ239362 AJ239377 AJ244929 AJ244931 AJ244935 AJ244937 AJ244938 AJ244939 AJ244941 AJ244943 AJ244944 AJ244951 AJ244959 AJ244960 AJ244962 AJ244966 AJ244967 AJ244968 AJ244969 AJ244972 AJ244973 AJ244975 AJ244978 AJ244982 AJ244984 AJ244985 AJ244987 AJ244988 AJ244990 AJ244991 AJ244992 AJ244994 AJ245008 AJ245009 AJ245011 AJ245013 AJ245017 AJ245028 AJ245035 AJ245036 AJ245039 AJ245040 AJ245041 AJ245042 AJ245043 AJ245044 AJ245046 AJ245049 AJ245051 AJ245052 AJ245054 AJ245057 AJ245065 AJ245236 AJ245238 AJ249631 AJ279513 AJ279519 AJ279521 AJ279526 AJ279531 AJ279535 AJ556773 AJ574778 AJ579118 AJ579121 AJ579122 AJ579124 AJ579129 AJ579135 AJ579164 AJ579165 AJ579167 AJ579175 AJ579176 AJ579201 AJ579206 AJ579208 AJ579211 AJ579213 AJ579240 AJ579241 AJ579242 AJ579243 AJ579246 AJ579248 AJ579249 AJ579250 AJ579253 AJ579255 AJ579256 AJ579257 AJ579258 AJ579259 AJ579260 AJ579286 AJ579287 AJ579289 AJ579290 AJ579302 AJ579304 AY033257 AY062304 AY553641 AY553646 AY670708 AY670709 AY670710 AY670711 AY670716 AY670717 AY670718 AY670720 AY670721 AY670722 AY670723 AY670724 AY670730 AY670736 AY670738 AY670739 AY670743 AY670749 AY670750 AY670755 AY670757 AY670760 AY670761 AY670763 AY670766 AY670767 AY670768 AY670772 AY670775 AY670777 AY670779 AY670781 AY670782 AY670785 AY670787 AY670789 AY670794 AY670795 AY670796 AY670798 AY670801 AY670803 AY670804 AY670811 AY670813 AY670814 AY670815 AY670824 AY670826 AY670827 AY670828 AY670833 AY670834 AY670835 AY670838 AY670839 AY670840 AY670841 AY670842 AY670843 AY670845 AY670846 AY670851 AY670853 AY670855 AY670856 AY670860 AY670863 AY670864 AY670867 AY670870 AY670871 AY670873 AY670875 AY670878 AY670879 AY670882 AY670883 AY670884 AY670885 AY670890 AY670892 AY670893 AY670898 AY670899 AY670900 AY670903 AY670904 AY670905 AY670907 AY670911 AY670913 AY670916 AY670918 AY670919 AY670924 AY670928 AY670929 AY670931 AY670932 AY670935 AY670940 AY670943 AY670944 AY670946 AY670949 AY670952 AY670953 AY670954 AY670962 AY670965 AY670973 AY670974 AY670975 AY670976 AY670977 AY670981 AY670990 AY671010 AY671015 AY671024 AY671047 AY671065 AY671073 AY671078 AY671079 AY671087 AY671093 AY671094 AY671095 AY671096 AY671097 AY671099 AY671100 AY671103 AY671104 AY671105 AY671106 AY671107 AY671108 AY671110 AY671113 AY671115 AY671117 AY671118 AY671120 AY671121 AY671122 AY671123 AY671125 AY671128 AY671129 AY671132 AY671134 AY671135 AY671139 AY671145 AY671153 AY671155 AY671161 AY671209 AY671240 AY671245 AY671257 AY671274 AY671277 AY671283 AY671313 AY671314 AY671315 AY671316 AY671317 AY671319 AY671321 AY671322 AY671323 AY671328 AY671330 AY671332 AY671341 AY671345 AY671347 AY671348 AY671349 AY671354 AY671364 AY671366 AY671370 AY671371 AY671380 AY671382 AY671383 AY671393 AY671409 AY671413 AY671416 AY671422 AY671424 AY671425 AY671427 AY671428 AY671429 AY671430 AY671434 AY671435 AY671436 AY671438 AY671441 AY671443 AY671444 AY671445 AY671446 AY671447 AY671449 AY671452 AY671453 AY671454 AY671455 AY671461 AY671462 AY671464 AY671468 AY671471 AY671478 AY671480 AY671481 AY671483 AY671486 AY671487 AY671491 AY671492 AY671503 AY671505 AY671507 AY671508 AY671510 AY671511 AY671515 AY671518 AY671519 AY671525 AY671527 AY671528 AY671530 AY671532 AY671535 AY671538 AY671539 AY671540 AY671541 AY671543 AY671544 AY671548 AY671555 AY671556 AY671561 AY671564 AY671565 AY671566 AY671568 AY671573 AY671574 AY671577 AY671579 AY671580 AY671581 AY671585 AY671587 AY671591 AY671593 AY671595 AY671612 AY671614 AY671617 AY671619 AY671620 AY671625 AY671629 AY671630 AY671632 AY671634 AY671637 AY671640 AY671642 AY671644 AY671648 AY671650 AY671651 AY671653 AY671658 AY671659 AY671660 AY671663 AY671668 AY671671 AY671676 AY671682 AY671684 AY671685 AY671688 AY671690 AY671691 AY671694 AY671697 AY671698 AY671699 AY671700 AY671702 AY671704 AY671706 AY671707 AY671708 AY671712 AY671716 AY671718 AY671724 AY671732 AY671733 AY671734 AY671735 AY671737 AY671739 AY671741 AY671746 AY671749 AY671750 AY671751 AY671753 AY671756 AY671763 AY671764 AY671765 AY671766 AY671767 AY671769 AY671771 AY671776 AY671781 AY671784 AY885181 AY941889 AY941914 AY941957 DQ005274 DQ005285 DQ100660 DQ100674 DQ100703 DQ100725 DQ100792 DQ100829 DQ100832 DQ100964 DQ926158 DQ926198 DQ926208 DQ926421 DQ926458 DQ926468 DQ926470 DQ926478 DQ926497 DQ926599 DQ926603 EF544907 EF544958 EF544959 EF544973 FJ208782 FJ492903 FJ492909 FJ492910 GU570373 HM152498 HM152511 HM152516 HQ392880 HQ689741 L12192 L23518 L23934 L25293 M26998 M74468 S64473 S66098 S67110 U00497 U00556 U22391 U71103 U89766 U97246 X56592 X87440 Z35492 Z46269 Z46271 Z46272 Z46273 Z46275 Z46277 Z46279 Z46282 Z46304 Z46305 Z46306 Z46307 Z46308 Z46340 Z46341 Z46342 Z49135 Z49140 Z49141 Z49143 Z70604 Z70605 Z70610 Z70616 Z70617 Z70625 Z70626 Z70627 Z70637 Z70638 Z70639 Z70640 Z70641 Z70642 Z70643 Z70644 Z70650 Z74665 Z74695 AY670806 AY670808 AY957532 AY686937 AY957534 DQ535279 DQ535294 DQ535296 DQ535314 DQ535320 DQ535326 DQ535459 EF178028 EF178136 HM996258 M84508 FJ039792 M84512 X54441 AY671298 AY670999 AY671028 AF283780 AF283781 M74018 M74021 AY670983 AY670985 AY670987 AY670989 AY670992 AY670993 AY670995 AY670997 AY670998 AY671018 AY671025 AY671033 AY671043 AY671307 AY671310 AY671046 AY671049 AY671205 AF283784 AY671151 AY671233 AJ579207 AY670982 AY671003 AY671029 AY671050 AY671156 AY671160 AY671171 AY671177 AY671190 AY671199 AY671201 AY671212 AY671226 AY671232 AY671235 AY671236 AY671250 AY671251 AY671261 AY671262 AY671270 AY671272 AY671278 AY671281 AY671287 AY671308 Z47229 AF062101 AF062146 AF062152 AF062158 AF062173 AF062181 AF062183 AF062187 AF062192 AF062196 AF062217 AF062218 AF062250 AJ579203 AY204755 AY204757 AY204759 AY204761 AY671006 AY671008 AY671061 AY671064 AY671168 AY671175 AY671183 AY671200 AY671207 AY671220 AY671238 AY671258 AY671268 AY671275 AY671289 AY671290 AY671303 AY671305 AY671696 AY671705 AY671713 AY671722 AY671727 AY671728 S59161 X64152 X64153 X65904 Z47228 Z47234 Z47241 Z75362 Z75374 Z75376 Z75379 Z75386 Z75389 Z75392 Z75394 Z75398 CU674902 CU678316 BC002963 BC073767 CU675962 BC017356 BC019235 BC001872 BC006180 BX538126 AK301454 TSC_hg19_v1_chr14_-_106830060 AK126280 AK128649 AK127921 CR933690	415	-	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 AJ245014 AJ245018 AJ245021 AJ245023 AJ245024 AJ245030 AJ245033 AJ245034 AJ245038 AJ245056 AJ245060 AJ245061 AJ245071 AJ249629 AJ279514 AJ279515 AJ279525 AJ279530 AJ308449 AJ389175 AJ389176 AJ414019 AJ416561 AJ555264 AJ556674 AJ556675 AJ556676 AJ556691 AJ556693 AJ574781 AJ579117 AJ579126 AJ579130 AJ579131 AJ579134 AJ579138 AJ579166 AJ579168 AJ579169 AJ579170 AJ579179 AJ579200 AJ579202 AJ579205 AJ579209 AJ579210 AJ579214 AJ579244 AJ579245 AJ579292 AJ579293 AJ579297 AJ617569 AY165854 AY268372 AY268373 AY300037 AY577300 AY640552 AY670713 AY670734 AY670740 AY670742 AY670747 AY670751 AY670754 AY670758 AY670762 AY670771 AY670774 AY670799 AY670802 AY670805 AY670817 AY670822 AY670823 AY670825 AY670849 AY670850 AY670858 AY670859 AY670865 AY670874 AY670881 AY670894 AY670896 AY670897 AY670902 AY670914 AY670920 AY670922 AY670947 AY670950 AY670955 AY670960 AY670961 AY670970 AY670972 AY670978 AY670980 AY670986 AY670991 AY671017 AY671060 AY671089 AY671090 AY671101 AY671109 AY671112 AY671114 AY671119 AY671124 AY671126 AY671136 AY671137 AY671140 AY671146 AY671264 AY671318 AY671368 AY671369 AY671384 AY671392 AY671418 AY671433 AY671439 AY671482 AY671489 AY671517 AY671524 AY671534 AY671536 AY671545 AY671552 AY671560 AY671562 AY671563 AY671567 AY671572 AY671576 AY671578 AY671582 AY671583 AY671588 AY671598 AY671599 AY671600 AY671602 AY671616 AY671624 AY671626 AY671635 AY671638 AY671661 AY671672 AY671677 AY671681 AY671730 AY671736 AY671744 AY671752 AY671773 AY671774 AY671778 AY671780 AY671786 AY781849 AY885184 AY941931 AY941962 AY941975 AY960198 AY960201 AY971014 AY971044 AY971045 AY971080 AY971086 AY998723 DQ005257 DQ065676 DQ100673 DQ100687 DQ100701 DQ100784 DQ100821 DQ100822 DQ100824 DQ100825 DQ100897 DQ100953 DQ205162 DQ205173 DQ212518 DQ212520 DQ328872 DQ431572 DQ431610 DQ926162 DQ926290 DQ926291 DQ926302 DQ926317 DQ926323 DQ926515 DQ926519 DQ926521 DQ926608 FJ039783 FJ039790 FJ039791 FJ385371 FJ385402 FR820867 FR820868 FR820869 FR820870 FR820871 FR820872 FR820873 FR820875 GU570374 HM152512 HM152521 HQ689769 JN201901 L12190 L43117 U00494 U00566 U00571 U00578 U00581 U64496 U96278 U96280 U96285 U96287 U97243 X84336 X84339 Y08428 Y09249 Y09390 Z18316 Z46285 Z70608 Z70621 Z70622 Z70623 Z70631 Z70632 Z70654 Z70655 Z70656 Z70657 DQ926182 DQ926347 DQ926348 AY944695 DQ535289 DQ535393 DQ535427 DQ535433 DQ535456 EF177973 EF178111 EF178132 FJ385279 AJ579303 X54447 AY392937 X17678 S63731 X54437 Z14197 AY671021 AY670994 AY671000 AY671001 AY671009 AY671012 AY671016 AY671023 AY671031 AY671036 AY671054 AY671142 AY671197 AY671335 AY671182 AF013622 AY671048 AY671052 AY671159 AY671179 AY671239 AY671263 AY671276 AY671279 AY671282 AF013619 AF062204 AF062240 AF247737 AY671165 AY671185 AY671217 AY671297 AY671693 AY671723 AY671725 CU677619 EU937522 L23556 L38425 M99607 U86523 U86524 X65903 X65911 Z14198 Z75364 Z75388 AY671162 X52895 TSC_hg19_v1_chr14_-_106878091 X56158 M97921 AF417843 AK057754 AK057775 AK130529 BC025985 BX640824 AK130609 Z14206 AK126352 AK129514 AK129592 AK129637 AK130589 AK130611 BC016369 BX538077 BX648082 BX648874 Z14195 AK095222 AK303185	48416	-	GQ232933 AY003798 FJ840151 FJ873995 EF407840 AM279492 AM279629 HM774186 AY957513 EF633772 AY062305 DQ524058 AF174122 AY944701 DQ065664 DQ065670 DQ065719 DQ065726 DQ926522 EF178118 EF633803 FJ385316 GU570332 HM995173 HM995251 HM995315 HM995321 HM995523 AB021518 AB021527 AF035043 AF471473 AJ579183 DQ535349 DQ535444 GU570331 GU570333 X95661 Z47231 BC092518 TSC_hg19_v1_chr14_-_106926725 BX647160 AK123783 AK097306 AK097329	97068	-	BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073765|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK130813|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130585|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128568|IGHD|3495|immunoglobulin heavy constant delta##AK129620|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC087841|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF174049|SKAP2|8935|src kinase associated phosphoprotein 2##BC002963|IGHM|3507|immunoglobulin heavy constant mu##BC073767|IGHM|3507|immunoglobulin heavy constant mu##BC017356|IGHM|3507|immunoglobulin heavy constant mu##BC019235|IGHM|3507|immunoglobulin heavy constant mu##BC001872|IGHM|3507|immunoglobulin heavy constant mu##BC006180|IGHM|3507|immunoglobulin heavy constant mu##BX538126|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK126280|IGHD|3495|immunoglobulin heavy constant delta##AK128649|IGHD|3495|immunoglobulin heavy constant delta##AK127921|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.989637	CTCF.p2:10:0.990
chr11	117678327	117678462	reg1002691.p1	14.753	+	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	-10435	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	-10541	-	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-479563	+	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	17040	-	BT006721 BC005302 NM_021603	20372	-	AL136699 TSC_hg19_v1_chr11_-_117747374 AY358976 BC018652 BC093040 AK311736 AL832811 AK290757	68995	-	AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2##BT006721|FXYD2|486|FXYD domain containing ion transport regulator 2##BC005302|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_021603|FXYD2|486|FXYD domain containing ion transport regulator 2##AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6##AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6	0.991759	CTCF.p2:-12:0.992
chr17	40915561	40915683	reg1002893.p1	14.752	+	BC018638 BC033118 TSC_hg19_v1_chr17_-_40913313	-2328	-	TSC_hg19_v1_chr17_+_40913244 BC027975 DQ893321 DQ896636 EF687002 AY265458	-2366	+	AJ001015 NM_005854 TSC_hg19_v1_chr17_+_40913215	-2409	+	TSC_hg19_v1_chr17_+_40925466 BC006282 NM_032353 AK312092	9832	+	TSC_hg19_v1_chr17_+_40925473 AB014763 CU675329	9862	+	TSC_hg19_v1_chr17_+_40932634 NM_032387 AF390018 BC136664 BC144356 AJ316534	17036	+	BC018638|LOC100190938|100190938|uncharacterized LOC100190938##BC033118|LOC100190938|100190938|uncharacterized LOC100190938##BC027975|RAMP2|10266|receptor (G protein-coupled) activity modifying protein 2##DQ893321|RAMP2|10266|receptor (G protein-coupled) activity modifying protein 2##DQ896636|RAMP2|10266|receptor (G protein-coupled) activity modifying protein 2##EF687002|RAMP2|10266|receptor (G protein-coupled) activity modifying protein 2##AY265458|RAMP2|10266|receptor (G protein-coupled) activity modifying protein 2##AJ001015|RAMP2|10266|receptor (G protein-coupled) activity modifying protein 2##NM_005854|RAMP2|10266|receptor (G protein-coupled) activity modifying protein 2##BC006282|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)##NM_032353|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)##AK312092|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)##AB014763|VPS25|84313|vacuolar protein sorting 25 homolog (S. cerevisiae)##NM_032387|WNK4|65266|WNK lysine deficient protein kinase 4##AF390018|WNK4|65266|WNK lysine deficient protein kinase 4##BC136664|WNK4|65266|WNK lysine deficient protein kinase 4##BC144356|WNK4|65266|WNK lysine deficient protein kinase 4##AJ316534|WNK4|65266|WNK lysine deficient protein kinase 4	0.99905	CTCF.p2:3:0.999
chr4	25989865	25990000	reg1002815.p1	14.752	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-74068	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-125378	-	NM_001177999 AK314514	-331842	+	L07875 BC020780 NM_005349 NM_203283	331387	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	332377	+	TSC_hg19_v1_chr4_+_26322635 AK302230	332704	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.181811	
chr8	11337772	11337908	reg1002332.p1	14.752	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-13611	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-132836	-	AJ291677 NM_054028 BC131696	-149330	+	S76617 NM_001715 BC018703 BC004473 BC038555	13753	+	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	223880	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	289428	+	AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##AJ291677|SLC35G5|83650|solute carrier family 35, member G5##NM_054028|SLC35G5|83650|solute carrier family 35, member G5##BC131696|SLC35G5|83650|solute carrier family 35, member G5##S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)	0.0	
chr18	42792835	42792948	reg1002062.p2	14.751	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-532023	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-532777	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1935462	-	NM_001242692 AK292422	61	+	AF349446 NM_007163	401874	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	511213	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.997097	CTCF.p2:-6:0.997
chr9	101077940	101078073	reg1003395.p1	14.751	+	TSC_hg19_v1_chr9_-_101018013 NM_018421	-60002	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	-60285	-	TSC_hg19_v1_chr9_-_100954922 AK292788 BC011690 AB209809 NM_052820	-123073	-	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	393179	-	CR749467 TSC_hg19_v1_chr9_-_101558801 NM_173551	480645	-	TSC_hg19_v1_chr9_+_101569953 AB527376 AB040673 AB078146 AJ132365 NM_024642	491984	+	NM_018421|TBC1D2|55357|TBC1 domain family, member 2##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##AK292788|CORO2A|7464|coronin, actin binding protein, 2A##BC011690|CORO2A|7464|coronin, actin binding protein, 2A##AB209809|CORO2A|7464|coronin, actin binding protein, 2A##NM_052820|CORO2A|7464|coronin, actin binding protein, 2A##DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##CR749467|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##NM_173551|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##AB040673|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AB078146|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AJ132365|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##NM_024642|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)	1.902985	CTCF.p2:-11:0.999	CTCF.p2:43:0.871
chr19	51286929	51287065	reg1003297.p1	14.750	+	BC095544 BC067453 BC067454 NM_001506	-13209	+	TSC_hg19_v1_chr19_+_51226662 AY870345 AB009244 AB528595 BT019673 CU675163	-60275	+	TSC_hg19_v1_chr19_+_51226653 BC005810 D86586	-60349	+	AB463389 NM_033068	6674	+	TSC_hg19_v1_chr19_-_51307892 NM_199250 NM_199249	20922	-	BT007253 S77952 DQ893072 DQ896328 AY703451 BC005313 M25629 X13561 AK293363 AY429508 NM_002257	40025	-	BC095544|GPR32|2854|G protein-coupled receptor 32##BC067453|GPR32|2854|G protein-coupled receptor 32##BC067454|GPR32|2854|G protein-coupled receptor 32##NM_001506|GPR32|2854|G protein-coupled receptor 32##AY870345|CLEC11A|6320|C-type lectin domain family 11, member A##AB009244|CLEC11A|6320|C-type lectin domain family 11, member A##BT019673|CLEC11A|6320|C-type lectin domain family 11, member A##BC005810|CLEC11A|6320|C-type lectin domain family 11, member A##D86586|CLEC11A|6320|C-type lectin domain family 11, member A##NM_033068|ACPT|93650|acid phosphatase, testicular##NM_199250|C19orf48|84798|chromosome 19 open reading frame 48##NM_199249|C19orf48|84798|chromosome 19 open reading frame 48##BT007253|KLK1|3816|kallikrein 1##S77952|KLK1|3816|kallikrein 1##DQ893072|KLK1|3816|kallikrein 1##DQ896328|KLK1|3816|kallikrein 1##AY703451|KLK1|3816|kallikrein 1##BC005313|KLK1|3816|kallikrein 1##M25629|KLK1|3816|kallikrein 1##X13561|KLK1|3816|kallikrein 1##AY429508|KLK1|3816|kallikrein 1##NM_002257|KLK1|3816|kallikrein 1	0.010264	
chr4	160124242	160124363	reg1001324.p1	14.750	+	AK058100 NM_152543	-167970	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-434017	+	TSC_hg19_v1_chr4_+_159690177 NM_020840	-434124	+	AK294459 NM_014247	64695	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	2960849	-	TSC_hg19_v1_chr4_-_164088002 AK097352	3963690	-	AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##NM_020840|FNIP2|57600|folliculin interacting protein 2##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.986117	CTCF.p2:18:0.986
chr19	3706179	3706310	reg1002407.p2	14.749	+	TSC_hg19_v1_chr19_-_3700467 NM_001195733 NM_012398	-5770	-	AK301309 TSC_hg19_v1_chr19_-_3700461 AK315912	-5784	-	FJ965536 FJ965537 TSC_hg19_v1_chr19_-_3700457 AB385354 AB011161	-5822	-	TSC_hg19_v1_chr19_+_3708368 AK091118 AK304462	2185	+	BC108906 BC108907 NM_014428	22129	+	TSC_hg19_v1_chr19_-_3761636 AB021638 NM_004886	55404	-	NM_001195733|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##NM_012398|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AK301309|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AK315912|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##FJ965536|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##FJ965537|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AB011161|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AK091118|TJP3|27134|tight junction protein 3 (zona occludens 3)##AK304462|TJP3|27134|tight junction protein 3 (zona occludens 3)##BC108906|TJP3|27134|tight junction protein 3 (zona occludens 3)##BC108907|TJP3|27134|tight junction protein 3 (zona occludens 3)##NM_014428|TJP3|27134|tight junction protein 3 (zona occludens 3)##AB021638|APBA3|9546|amyloid beta (A4) precursor protein-binding, family A, member 3##NM_004886|APBA3|9546|amyloid beta (A4) precursor protein-binding, family A, member 3	1.084871	CTCF.p2:0:0.992
chr3	123047815	123047917	reg1002082.p1	14.748	+	NM_012430 TSC_hg19_v1_chr3_+_122920787 AK315771 AF100749	-127076	+	NM_006810 TSC_hg19_v1_chr3_+_122785922 BC001625 D49490	-261948	+	TSC_hg19_v1_chr3_-_122746605 AK309848	-301258	-	AK303070 NM_001199642	87322	-	AB527359 NM_183357	119525	-	TSC_hg19_v1_chr3_-_123303927 CU687458 AK289983 NM_198402 AK125375 BC060839 AY191814 BC049369	256067	-	NM_012430|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK315771|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AF100749|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##NM_006810|PDIA5|10954|protein disulfide isomerase family A, member 5##BC001625|PDIA5|10954|protein disulfide isomerase family A, member 5##D49490|PDIA5|10954|protein disulfide isomerase family A, member 5##AK309848|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK303070|ADCY5|111|adenylate cyclase 5##NM_001199642|ADCY5|111|adenylate cyclase 5##NM_183357|ADCY5|111|adenylate cyclase 5##AK289983|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##NM_198402|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC060839|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AY191814|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC049369|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	0.996788	CTCF.p2:1:0.997
chr5	63259099	63259203	reg1003058.p1	14.748	+	AK314187 TSC_hg19_v1_chr5_-_63258084	-1129	-	AF498978 BC069159 NM_000524 AB464441 BC136263 TSC_hg19_v1_chr5_-_63257719 AK291429 AK311460	-1489	-	AK123022 NM_181506 BX649157 AY358733 BC110838 AY280614	-1384513	+	TSC_hg19_v1_chr5_+_63461666 AK090756 AX746601 NM_001113561 NM_178532 BC101277 BC101278 BC101279 AL832580 BC101397	202530	+	BC140707 NM_001029875 BX640900	543330	+	NM_001164442 TSC_hg19_v1_chr5_+_63986235	727034	+	AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AF498978|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC069159|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_000524|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC136263|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK291429|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK123022|LRRC70|100130733|leucine rich repeat containing 70##NM_181506|LRRC70|100130733|leucine rich repeat containing 70##AY358733|LRRC70|100130733|leucine rich repeat containing 70##BC110838|LRRC70|100130733|leucine rich repeat containing 70##AY280614|LRRC70|100130733|leucine rich repeat containing 70##AK090756|RNF180|285671|ring finger protein 180##NM_001113561|RNF180|285671|ring finger protein 180##NM_178532|RNF180|285671|ring finger protein 180##BC101277|RNF180|285671|ring finger protein 180##BC101278|RNF180|285671|ring finger protein 180##BC101279|RNF180|285671|ring finger protein 180##AL832580|RNF180|285671|ring finger protein 180##BC101397|RNF180|285671|ring finger protein 180##BC140707|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001029875|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##BX640900|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001164442|FAM159B|100132916|family with sequence similarity 159, member B	1.018782	CTCF.p2:-7:0.996
chr19	11698569	11698677	reg1002078.p1	14.747	+	BC111014 TSC_hg19_v1_chr19_-_11689776 AK307164 NM_001111035 NM_001111036	-8841	-	AK225912 NM_001111034	-9032	-	TSC_hg19_v1_chr19_-_11688516 AK290717 NM_001611	-10093	-	NM_145295 BC098416 AK095639 BC006279 AK074846 BC069232	9668	+	X51760 BC052597 AK308189 NM_001080493 AK300579 AK303213	151135	-	NM_152355 TSC_hg19_v1_chr19_+_11877884 AK095956	179237	+	BC111014|ACP5|54|acid phosphatase 5, tartrate resistant##AK307164|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111035|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111036|ACP5|54|acid phosphatase 5, tartrate resistant##AK225912|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111034|ACP5|54|acid phosphatase 5, tartrate resistant##AK290717|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001611|ACP5|54|acid phosphatase 5, tartrate resistant##NM_145295|ZNF627|199692|zinc finger protein 627##BC098416|ZNF627|199692|zinc finger protein 627##AK095639|ZNF627|199692|zinc finger protein 627##BC006279|ZNF627|199692|zinc finger protein 627##AK074846|ZNF627|199692|zinc finger protein 627##BC069232|ZNF627|199692|zinc finger protein 627##X51760|ZNF823|55552|zinc finger protein 823##BC052597|ZNF823|55552|zinc finger protein 823##AK308189|ZNF823|55552|zinc finger protein 823##NM_001080493|ZNF823|55552|zinc finger protein 823##AK300579|ZNF823|55552|zinc finger protein 823##AK303213|ZNF823|55552|zinc finger protein 823##NM_152355|ZNF441|126068|zinc finger protein 441##AK095956|ZNF441|126068|zinc finger protein 441	0.0	
chr17	4118773	4118908	reg1003076.p1	14.746	+	TSC_hg19_v1_chr17_+_4046995 AK313088 AK172844 BC020263 CU690822 DQ891696 DQ894877	-71831	+	TSC_hg19_v1_chr17_+_4046490 NM_144611 BC051697	-72357	+	TSC_hg19_v1_chr17_-_4046308 AK127482	-72530	-	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	48311	-	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	150871	-	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	151068	-	AK313088|CYB5D2|124936|cytochrome b5 domain containing 2##AK172844|CYB5D2|124936|cytochrome b5 domain containing 2##BC020263|CYB5D2|124936|cytochrome b5 domain containing 2##DQ891696|CYB5D2|124936|cytochrome b5 domain containing 2##DQ894877|CYB5D2|124936|cytochrome b5 domain containing 2##NM_144611|CYB5D2|124936|cytochrome b5 domain containing 2##BC051697|CYB5D2|124936|cytochrome b5 domain containing 2##AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	0.990474	CTCF.p2:-16:0.990
chr1	91630929	91631058	reg1003232.p1	14.745	+	BC150177 TSC_hg19_v1_chr1_-_91487794 NM_032186 NM_201269	-143203	-	TSC_hg19_v1_chr1_-_91487593 BC110841 BC132776 BC132778	-143358	-	TSC_hg19_v1_chr1_-_91487586 BC092462	-143404	-	TSC_hg19_v1_chr1_-_91870367 AB058637 AK294754 AK302582 AB058636 AB204867 NM_001017975	239379	-	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	335426	+	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	335688	+	BC150177|ZNF644|84146|zinc finger protein 644##NM_032186|ZNF644|84146|zinc finger protein 644##NM_201269|ZNF644|84146|zinc finger protein 644##BC110841|ZNF644|84146|zinc finger protein 644##BC132776|ZNF644|84146|zinc finger protein 644##BC132778|ZNF644|84146|zinc finger protein 644##BC092462|ZNF644|84146|zinc finger protein 644##AB058637|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK294754|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK302582|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB058636|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB204867|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001017975|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	0.99882	CTCF.p2:11:0.999
chr12	98884865	98885009	reg1002217.p1	14.743	+	BC027605 NM_001135175	-1583694	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-1583906	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-2090620	-	TSC_hg19_v1_chr12_-_98897622 AK126817	12690	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	24430	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	24470	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.987716	CTCF.p2:7:0.988
chr10	60051452	60051583	reg1003229.p1	14.742	+	BC005962 TSC_hg19_v1_chr10_+_60028929 NM_018464 BC059168 AF220049 BC008474 BC007043 AY960578 AK312017	-22571	+	TSC_hg19_v1_chr10_-_60027655 BC016612 BC065709 NM_152230	-23856	-	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	-1930491	-	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	43319	+	BC029815 TSC_hg19_v1_chr10_+_60145169 AK312558 M62810 NM_003201 BC018628 BC104482 BC126366 EU279428 HQ258758 AB451241 AB451366 AB464302 BT019658 BT019659 CR407653	93688	+	TSC_hg19_v1_chr10_+_60272869 NM_001080512 AY726586	221395	+	BC005962|CISD1|55847|CDGSH iron sulfur domain 1##NM_018464|CISD1|55847|CDGSH iron sulfur domain 1##BC059168|CISD1|55847|CDGSH iron sulfur domain 1##AF220049|CISD1|55847|CDGSH iron sulfur domain 1##BC008474|CISD1|55847|CDGSH iron sulfur domain 1##BC007043|CISD1|55847|CDGSH iron sulfur domain 1##AY960578|CISD1|55847|CDGSH iron sulfur domain 1##AK312017|CISD1|55847|CDGSH iron sulfur domain 1##BC016612|IPMK|253430|inositol polyphosphate multikinase##BC065709|IPMK|253430|inositol polyphosphate multikinase##NM_152230|IPMK|253430|inositol polyphosphate multikinase##AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC029815|TFAM|7019|transcription factor A, mitochondrial##AK312558|TFAM|7019|transcription factor A, mitochondrial##M62810|TFAM|7019|transcription factor A, mitochondrial##NM_003201|TFAM|7019|transcription factor A, mitochondrial##BC018628|TFAM|7019|transcription factor A, mitochondrial##BC104482|TFAM|7019|transcription factor A, mitochondrial##BC126366|TFAM|7019|transcription factor A, mitochondrial##EU279428|TFAM|7019|transcription factor A, mitochondrial##HQ258758|TFAM|7019|transcription factor A, mitochondrial##AB451241|TFAM|7019|transcription factor A, mitochondrial##AB451366|TFAM|7019|transcription factor A, mitochondrial##BT019658|TFAM|7019|transcription factor A, mitochondrial##BT019659|TFAM|7019|transcription factor A, mitochondrial##CR407653|TFAM|7019|transcription factor A, mitochondrial##NM_001080512|BICC1|80114|bicaudal C homolog 1 (Drosophila)##AY726586|BICC1|80114|bicaudal C homolog 1 (Drosophila)	0.723478	CTCF.p2:4:0.723
chr12	114418448	114418576	reg1003167.p1	14.742	+	CU678656 EU831458 EU831545 AB385372 AB014582 BC004289 BC006137 AL117547 TSC_hg19_v1_chr12_-_114404131 AK291444 AK314606 NM_001146698 NM_001146699 NM_016196	-14408	-	AF291181 NM_022363	-508636	-	TSC_hg19_v1_chr12_+_113860217 BC009849 NM_138432 BC091479 AF134473	-558315	+	NM_080718 U80987 U89353 AB527531 EU446658	423192	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	425412	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	427706	-	EU831458|RBM19|9904|RNA binding motif protein 19##EU831545|RBM19|9904|RNA binding motif protein 19##AB014582|RBM19|9904|RNA binding motif protein 19##BC004289|RBM19|9904|RNA binding motif protein 19##BC006137|RBM19|9904|RNA binding motif protein 19##AL117547|RBM19|9904|RNA binding motif protein 19##AK291444|RBM19|9904|RNA binding motif protein 19##AK314606|RBM19|9904|RNA binding motif protein 19##NM_001146698|RBM19|9904|RNA binding motif protein 19##NM_001146699|RBM19|9904|RNA binding motif protein 19##NM_016196|RBM19|9904|RNA binding motif protein 19##AF291181|LHX5|64211|LIM homeobox 5##NM_022363|LHX5|64211|LIM homeobox 5##BC009849|SDSL|113675|serine dehydratase-like##NM_138432|SDSL|113675|serine dehydratase-like##BC091479|SDSL|113675|serine dehydratase-like##AF134473|SDSL|113675|serine dehydratase-like##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5	0.876971	CTCF.p2:-4:0.877
chr2	11722953	11723078	reg1003527.p1	14.742	+	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-40172	+	TSC_hg19_v1_chr2_+_11682798 BC071853	-40214	+	AF245390 NM_148903 TSC_hg19_v1_chr2_+_11680117	-42912	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	87276	-	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	163760	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	1134238	+	AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1##AF245390|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_148903|GREB1|9687|growth regulation by estrogen in breast cancer 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.954893	CTCF.p2:7:0.955
chr2	235459302	235459416	reg1001349.p1	14.741	+	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	-53640	-	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-499972	+	AY090109 NM_024080 BC126342 BC143819	-633314	+	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	401299	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	943444	+	TSC_hg19_v1_chr2_+_236402950 BC140856	943618	+	NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.927734	CTCF.p2:0:0.928
chr3	122279631	122279758	reg1002127.p1	14.741	+	TSC_hg19_v1_chr3_-_122233782 NM_002264	-45908	-	TSC_hg19_v1_chr3_-_122233764 BC002374 BC003009 AK312713	-45922	-	S75295 TSC_hg19_v1_chr3_-_122233757 BC090864	-45994	-	TSC_hg19_v1_chr3_-_122283120 AK125581 AK299107 BX648869 BC039580 AK292959 AK313494 NM_001146102 NM_001146105 BC017463 NM_001146104 NM_001146106	3444	-	AY225123 TSC_hg19_v1_chr3_+_122283217 AK125086 NM_138287 BC060509 AL833598 BC042191 CU692078 AF484416 AY780792	3512	+	AF307338 AF307339 TSC_hg19_v1_chr3_-_122283426 NM_001146103 NM_031458	3778	-	NM_002264|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC002374|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC003009|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##AK312713|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##S75295|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC090864|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##AK125581|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##AK299107|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##BX648869|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##BC039580|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##AK292959|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##AK313494|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_001146102|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_001146105|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##BC017463|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_001146104|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_001146106|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##AY225123|DTX3L|151636|deltex 3-like (Drosophila)##AK125086|DTX3L|151636|deltex 3-like (Drosophila)##NM_138287|DTX3L|151636|deltex 3-like (Drosophila)##BC060509|DTX3L|151636|deltex 3-like (Drosophila)##AL833598|DTX3L|151636|deltex 3-like (Drosophila)##BC042191|DTX3L|151636|deltex 3-like (Drosophila)##AF484416|DTX3L|151636|deltex 3-like (Drosophila)##AY780792|DTX3L|151636|deltex 3-like (Drosophila)##AF307338|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##AF307339|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_001146103|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_031458|PARP9|83666|poly (ADP-ribose) polymerase family, member 9	0.999175	CTCF.p2:-10:0.999
chr11	123118021	123118163	reg1003473.p1	14.740	+	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	-52087	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	-52190	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	-185213	-	TSC_hg19_v1_chr11_+_123396366 AK127457	278263	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	278412	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	312881	+	AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AK127457|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B	0.998521	CTCF.p2:10:0.999
chr11	1715345	1715461	reg1002519.p2	14.740	+	AB126074 AJ628247 NM_001001480	-64385	+	AB528165 AB126073 NM_001012709	-72058	-	AY597812 AB528164 AB126072 NM_001012708	-85750	-	AB126075 NM_001012416 BC130399 BC133035	3035	+	TSC_hg19_v1_chr11_-_1769086 AK289574	53737	-	NM_001170820 TSC_hg19_v1_chr11_-_1771824	56421	-	AB126074|KRTAP5-5|439915|keratin associated protein 5-5##AJ628247|KRTAP5-5|439915|keratin associated protein 5-5##NM_001001480|KRTAP5-5|439915|keratin associated protein 5-5##AB126073|KRTAP5-4|387267|keratin associated protein 5-4##NM_001012709|KRTAP5-4|387267|keratin associated protein 5-4##AY597812|KRTAP5-3|387266|keratin associated protein 5-3##AB126072|KRTAP5-3|387266|keratin associated protein 5-3##NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3##AB126075|KRTAP5-6|440023|keratin associated protein 5-6##NM_001012416|KRTAP5-6|440023|keratin associated protein 5-6##BC130399|KRTAP5-6|440023|keratin associated protein 5-6##BC133035|KRTAP5-6|440023|keratin associated protein 5-6##AK289574|IFITM10|402778|interferon induced transmembrane protein 10##NM_001170820|IFITM10|402778|interferon induced transmembrane protein 10	0.966125	CTCF.p2:-10:0.966
chr1	155220586	155220726	reg1002066.p1	14.740	+	BC062626 AK311242 TSC_hg19_v1_chr1_-_155214419 AK312502 BX648487 AK300829 AK291911 AK300876 NM_001005741 NM_001005742 NM_001171811	-6173	-	TSC_hg19_v1_chr1_-_155211049 AK298900 AK301879 NM_001171812 NM_000157	-9598	-	K02920 AB527624 BC003356 D13286 AK301374 M19285 M22212 TSC_hg19_v1_chr1_-_155211041 AK300186 AK302000	-9690	-	AB587342 EU446765 CU679147 CU691816 TSC_hg19_v1_chr1_-_155224733 BC040136 BC006493 BC007444 BC033707	4057	-	TSC_hg19_v1_chr1_-_155224954 BC017262	4310	-	BC008854 BC010471 TSC_hg19_v1_chr1_-_155225221 AK093335 AX748059 NM_006589 NM_198264	4562	-	BC062626|GBAP1|2630|glucosidase, beta, acid pseudogene 1##AK311242|GBA|2629|glucosidase, beta, acid##AK312502|GBA|2629|glucosidase, beta, acid##BX648487|GBA|2629|glucosidase, beta, acid##AK300829|GBA|2629|glucosidase, beta, acid##AK291911|GBA|2629|glucosidase, beta, acid##AK300876|GBA|2629|glucosidase, beta, acid##NM_001005741|GBA|2629|glucosidase, beta, acid##NM_001005742|GBA|2629|glucosidase, beta, acid##NM_001171811|GBA|2629|glucosidase, beta, acid##AK298900|GBA|2629|glucosidase, beta, acid##AK301879|GBA|2629|glucosidase, beta, acid##NM_001171812|GBA|2629|glucosidase, beta, acid##NM_000157|GBA|2629|glucosidase, beta, acid##K02920|GBA|2629|glucosidase, beta, acid##BC003356|GBA|2629|glucosidase, beta, acid##D13286|GBA|2629|glucosidase, beta, acid##AK301374|GBA|2629|glucosidase, beta, acid##M19285|GBA|2629|glucosidase, beta, acid##AK300186|GBA|2629|glucosidase, beta, acid##AK302000|GBA|2629|glucosidase, beta, acid##EU446765|FAM189B|10712|family with sequence similarity 189, member B##BC040136|FAM189B|10712|family with sequence similarity 189, member B##BC006493|FAM189B|10712|family with sequence similarity 189, member B##BC007444|FAM189B|10712|family with sequence similarity 189, member B##BC033707|FAM189B|10712|family with sequence similarity 189, member B##BC017262|FAM189B|10712|family with sequence similarity 189, member B##BC008854|FAM189B|10712|family with sequence similarity 189, member B##BC010471|FAM189B|10712|family with sequence similarity 189, member B##AK093335|FAM189B|10712|family with sequence similarity 189, member B##NM_006589|FAM189B|10712|family with sequence similarity 189, member B##NM_198264|FAM189B|10712|family with sequence similarity 189, member B	1.212788	CTCF.p2:-31:0.746	CTCF.p2:45:0.467
chr16	46981862	46981988	reg1003340.p1	14.739	+	NM_001142466 AK094971	-62823	+	TSC_hg19_v1_chr16_+_46918291 AY029173 NM_133443 BC062555	-63644	+	TSC_hg19_v1_chr16_-_46865090 CU691166 BC056676 BX647945 NM_001001436	-116837	-	TSC_hg19_v1_chr16_-_47005340 Y13350	23423	-	CU677459 AF011793 AJ001309 TSC_hg19_v1_chr16_-_47007561	25597	-	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	25670	-	NM_001142466|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##AK094971|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##AY029173|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##NM_133443|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##BC062555|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##BC056676|C16orf87|388272|chromosome 16 open reading frame 87##BX647945|C16orf87|388272|chromosome 16 open reading frame 87##NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87##Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AJ001309|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2	0.45936	CTCF.p2:-7:0.459
chr7	74282592	74282717	reg1003091.p1	14.737	+	AY260739 AY312853 AY336980 BC047706 BC061590 AK225845 AY336979 BC136849 BC067859 AK291431 AY336981 BC038098 NM_173537 AK098269	-14815	-	BC002816 NM_000265 BC065731 AK127905 AK223217 AK292094 AK316341 AK316552 AB590366 CU678218 DQ893150 DQ896445 U25793	-94302	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	-210532	+	TSC_hg19_v1_chr7_-_74306679 BC002581	24021	-	TSC_hg19_v1_chr7_-_74306685 AK303473 AK307228 AK309007	24029	-	TSC_hg19_v1_chr7_-_74306725 BC095487	24067	-	AY260739|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336980|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC047706|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC061590|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336979|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AY336981|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC038098|GTF2IRD2|84163|GTF2I repeat domain containing 2##NM_173537|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC002816|NCF1|653361|neutrophil cytosolic factor 1##NM_000265|NCF1|653361|neutrophil cytosolic factor 1##BC065731|NCF1|653361|neutrophil cytosolic factor 1##AK127905|NCF1|653361|neutrophil cytosolic factor 1##AK223217|NCF1|653361|neutrophil cytosolic factor 1##AK292094|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316341|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316552|NCF1|653361|neutrophil cytosolic factor 1##DQ893150|NCF1|653361|neutrophil cytosolic factor 1##DQ896445|NCF1|653361|neutrophil cytosolic factor 1##U25793|NCF1|653361|neutrophil cytosolic factor 1##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi##BC002581|STAG3L2|442582|stromal antigen 3-like 2##AK303473|STAG3L2|442582|stromal antigen 3-like 2##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2	0.423904	CTCF.p2:12:0.424
chr12	111462117	111462259	reg1003061.p1	14.735	+	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	-103810	-	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-177385	+	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	-281432	-	BC151245 NM_015267 AB006631 AF271236	9684	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	344658	-	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	344722	-	M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A	0.675608	CTCF.p2:-18:0.676
chr20	43362124	43362228	reg1002579.p1	14.734	+	TSC_hg19_v1_chr20_+_43344010 AK313853 BC064379 AF083500 AF074604 AY358915 CU687868	-18159	+	NM_003881 BC017782 TSC_hg19_v1_chr20_+_43343953	-18256	+	BC058074 TSC_hg19_v1_chr20_+_43343549 AK074695	-18634	+	AF257081 NM_022358 BC093874 BC143282 AF294350 AF294351 AF336342	12343	+	AK126807 BC104191 BC104190 BC112985 AY326954 NM_001205317 NM_182970	76753	-	TSC_hg19_v1_chr20_+_43514345 NM_003404 NM_139323 AK292717 BC001359	152168	+	AK313853|WISP2|8839|WNT1 inducible signaling pathway protein 2##BC064379|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF083500|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF074604|WISP2|8839|WNT1 inducible signaling pathway protein 2##AY358915|WISP2|8839|WNT1 inducible signaling pathway protein 2##NM_003881|WISP2|8839|WNT1 inducible signaling pathway protein 2##BC017782|WISP2|8839|WNT1 inducible signaling pathway protein 2##BC058074|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF257081|KCNK15|60598|potassium channel, subfamily K, member 15##NM_022358|KCNK15|60598|potassium channel, subfamily K, member 15##BC093874|KCNK15|60598|potassium channel, subfamily K, member 15##BC143282|KCNK15|60598|potassium channel, subfamily K, member 15##AF294350|KCNK15|60598|potassium channel, subfamily K, member 15##AF294351|KCNK15|60598|potassium channel, subfamily K, member 15##AF336342|KCNK15|60598|potassium channel, subfamily K, member 15##AK126807|RIMS4|140730|regulating synaptic membrane exocytosis 4##BC104191|RIMS4|140730|regulating synaptic membrane exocytosis 4##BC104190|RIMS4|140730|regulating synaptic membrane exocytosis 4##BC112985|RIMS4|140730|regulating synaptic membrane exocytosis 4##AY326954|RIMS4|140730|regulating synaptic membrane exocytosis 4##NM_001205317|RIMS4|140730|regulating synaptic membrane exocytosis 4##NM_182970|RIMS4|140730|regulating synaptic membrane exocytosis 4##NM_003404|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##NM_139323|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AK292717|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##BC001359|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	0.915794	CTCF.p2:18:0.898
chr2	218654056	218654161	reg1001576.p1	14.733	+	BC029516 NM_003284	-929327	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-1093848	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-1094542	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	154673	-	AK001785 TSC_hg19_v1_chr2_-_218843551	189438	-	TSC_hg19_v1_chr2_-_218867719 AK309785	213615	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.997683	CTCF.p2:-4:0.998
chr8	96261045	96261167	reg1002736.p1	14.732	+	TSC_hg19_v1_chr8_+_96146116 AK023249	-114970	+	TSC_hg19_v1_chr8_+_96146012 AL834473 BC011806	-115098	+	TSC_hg19_v1_chr8_+_96145948 NM_024613	-115161	+	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	19945	+	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	20359	-	BC127948 BC127947 AJ537424 NM_001001557	911875	-	AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##AL834473|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC011806|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6	0.999046	CTCF.p2:4:0.999
chr2	232513403	232513559	reg1003513.p1	14.730	+	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	-55864	+	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	-118327	-	BC033054 TSC_hg19_v1_chr2_-_232379076	-134399	-	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	59753	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	59851	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	132444	-	NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta	0.987995	CTCF.p2:0:0.988
chr9	19926123	19926249	reg1002268.p1	14.730	+	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-139235	-	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-517183	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-545959	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	696262	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	696310	-	AK056522 AY139834 NM_017794	732121	+	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797	0.998685	CTCF.p2:-14:0.999
chr19	48655847	48655987	reg1003983.p1	14.729	+	AF058921 BC017956 AK022440 TSC_hg19_v1_chr19_-_48614075 AF065214 BC063416 AK314524 AK295400 NM_001159322 NM_001159323 NM_003706	-41857	-	HQ258076 BC126133 BC126135 AF169159 NM_019855	-108672	-	AF279147 NM_022142 BC015598	-157992	+	M36067 NM_000234 TSC_hg19_v1_chr19_-_48673602 AK314210 AK297296 AK303644 AB208791 AK225863 AK300370	17664	-	TSC_hg19_v1_chr19_+_48673949 BC043386	18036	+	CU691176 EU118120 EU118121 NM_001184900	88380	-	AF058921|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC017956|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK022440|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AF065214|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC063416|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK314524|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK295400|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159322|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159323|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_003706|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##HQ258076|CABP5|56344|calcium binding protein 5##BC126133|CABP5|56344|calcium binding protein 5##BC126135|CABP5|56344|calcium binding protein 5##AF169159|CABP5|56344|calcium binding protein 5##NM_019855|CABP5|56344|calcium binding protein 5##AF279147|ELSPBP1|64100|epididymal sperm binding protein 1##NM_022142|ELSPBP1|64100|epididymal sperm binding protein 1##BC015598|ELSPBP1|64100|epididymal sperm binding protein 1##M36067|LIG1|3978|ligase I, DNA, ATP-dependent##NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent##AK314210|LIG1|3978|ligase I, DNA, ATP-dependent##AK297296|LIG1|3978|ligase I, DNA, ATP-dependent##AK303644|LIG1|3978|ligase I, DNA, ATP-dependent##AB208791|LIG1|3978|ligase I, DNA, ATP-dependent##AK225863|LIG1|3978|ligase I, DNA, ATP-dependent##AK300370|LIG1|3978|ligase I, DNA, ATP-dependent##BC043386|C19orf68|374920|chromosome 19 open reading frame 68##EU118120|CARD8|22900|caspase recruitment domain family, member 8##EU118121|CARD8|22900|caspase recruitment domain family, member 8##NM_001184900|CARD8|22900|caspase recruitment domain family, member 8	0.991745	CTCF.p2:-1:0.992
chr5	107009450	107009592	reg1002823.p1	14.729	+	AK308672 NM_001962 U26403	-2931	-	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-4111040	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4415064	+	TSC_hg19_v1_chr5_-_107717106 AK126722	707609	-	BC063316 NM_001163315	708277	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	1054459	-	AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AB593118|HP07349|100652853|uncharacterized protein HP07349	0.048985	
chr1	111162083	111162207	reg1002264.p1	14.726	+	AK290061 NM_004974 TSC_hg19_v1_chr1_-_111148981	-13163	-	NM_005549	-100349	-	AY358683 AF333024 NM_032414 AY029225 BC025399 DQ891570 DQ894763	-168354	+	BC043564 NM_001204269	11950	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	55207	-	TSC_hg19_v1_chr1_-_111217553 AK314009	55399	-	AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_005549|KCNA10|3744|potassium voltage-gated channel, shaker-related subfamily, member 10##AY358683|PROK1|84432|prokineticin 1##AF333024|PROK1|84432|prokineticin 1##NM_032414|PROK1|84432|prokineticin 1##AY029225|PROK1|84432|prokineticin 1##BC025399|PROK1|84432|prokineticin 1##DQ891570|PROK1|84432|prokineticin 1##DQ894763|PROK1|84432|prokineticin 1##BC043564|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_001204269|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3	0.999391	CTCF.p2:-4:0.999
chr6	143748468	143748590	reg1002145.p2	14.726	+	TSC_hg19_v1_chr6_+_143382055 BC025278 CU692954 DQ893291 DQ896622 BX538067	-366447	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	-366493	+	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	-366534	+	TSC_hg19_v1_chr6_-_143771811 BC037955 NM_182503	23300	-	TSC_hg19_v1_chr6_+_143771941 NM_003630 BC014551 BC015506 AB035307 AK025644 AK300907 AJ001625 AJ131389 AY277600 CR542062 CU677325	23471	+	CU678350 AK296485 BC003060 AK075458 TSC_hg19_v1_chr6_-_143832841 AY358551 BC051268 AK315475 NM_032020	84365	-	BC025278|AIG1|51390|androgen-induced 1##DQ893291|AIG1|51390|androgen-induced 1##DQ896622|AIG1|51390|androgen-induced 1##BX538067|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC037955|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_182503|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_003630|PEX3|8504|peroxisomal biogenesis factor 3##BC014551|PEX3|8504|peroxisomal biogenesis factor 3##BC015506|PEX3|8504|peroxisomal biogenesis factor 3##AB035307|PEX3|8504|peroxisomal biogenesis factor 3##AK025644|PEX3|8504|peroxisomal biogenesis factor 3##AK300907|PEX3|8504|peroxisomal biogenesis factor 3##AJ001625|PEX3|8504|peroxisomal biogenesis factor 3##AJ131389|PEX3|8504|peroxisomal biogenesis factor 3##AY277600|PEX3|8504|peroxisomal biogenesis factor 3##CR542062|PEX3|8504|peroxisomal biogenesis factor 3##AK296485|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC003060|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK075458|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AY358551|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC051268|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK315475|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_032020|FUCA2|2519|fucosidase, alpha-L- 2, plasma	0.068139	
chr11	60386307	60386430	reg1002230.p2	14.725	+	AY324188 AY324189 AY324190 NM_001012417 NM_001100909 BC140799 BC171746	-103420	+	AK000224 AK309275 NM_001164470 NM_017716 BC029793	-126112	+	NM_021950 NM_152866 AK225630 AK292168 AK300025 AK310118 BC002807 X07203 X12530	-163055	+	AF237905 NM_031457 AK310969 AK310884 AK315901 BC022895 AK308413 AF350504 AK310872	80764	+	NM_001098835 NM_152717 AK300233 BC031610 AK091846 AX747218 AY584608 AY584609	138041	+	AK122633 NM_206893 BC137259 BC137263	166477	+	AY324188|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324189|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324190|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001012417|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001100909|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC140799|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC171746|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AK000224|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_001164470|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_017716|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##BC029793|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_021950|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##NM_152866|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK225630|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK292168|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK300025|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK310118|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##BC002807|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##X07203|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##X12530|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AF237905|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_031457|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310969|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310884|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK315901|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##BC022895|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK308413|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AF350504|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310872|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_001098835|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##NM_152717|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK300233|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##BC031610|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK091846|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584608|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584609|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK122633|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_206893|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137259|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137263|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10	0.957154	CTCF.p2:11:0.957
chr4	10020476	10020608	reg1002300.p1	14.725	+	NM_000798	-237285	+	AF529414 NM_001040448	-574283	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-655689	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	2582	-	AK310895 BC018897 NM_001001290 AK096819	21380	-	TSC_hg19_v1_chr4_-_10118286 AB385044 CU674086 CU677992	97745	-	NM_000798|DRD5|1816|dopamine receptor D5##AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	1.370519	CTCF.p2:-29:0.416	CTCF.p2:32:0.955
chr22	36023345	36023471	reg1002467.p1	14.724	+	TSC_hg19_v1_chr22_-_36019368 NM_203377	-4027	-	CR541949 CU013116 CU013404 DQ893679 DQ896050 AB528844 CR456516 TSC_hg19_v1_chr22_-_36013480 AK300657 BC014547 NM_005368 AK314057 NM_203378	-9980	-	BC013419 NM_014310 CR456477	-86015	+	TSC_hg19_v1_chr22_+_36044432 AY014879 NM_030641 BC047864 AX775805 AL834420 AK095881	21028	+	TSC_hg19_v1_chr22_+_36044482 BC038950 AY358210	21092	+	AB528803 AY014878 NM_030642	90509	+	NM_203377|MB|4151|myoglobin##CR541949|MB|4151|myoglobin##CU013116|MB|4151|myoglobin##CU013404|MB|4151|myoglobin##DQ893679|MB|4151|myoglobin##DQ896050|MB|4151|myoglobin##CR456516|MB|4151|myoglobin##AK300657|MB|4151|myoglobin##BC014547|MB|4151|myoglobin##NM_005368|MB|4151|myoglobin##AK314057|MB|4151|myoglobin##NM_203378|MB|4151|myoglobin##BC013419|RASD2|23551|RASD family, member 2##NM_014310|RASD2|23551|RASD family, member 2##CR456477|RASD2|23551|RASD family, member 2##AY014879|APOL6|80830|apolipoprotein L, 6##NM_030641|APOL6|80830|apolipoprotein L, 6##BC047864|APOL6|80830|apolipoprotein L, 6##AL834420|APOL6|80830|apolipoprotein L, 6##AK095881|APOL6|80830|apolipoprotein L, 6##BC038950|APOL6|80830|apolipoprotein L, 6##AY358210|APOL6|80830|apolipoprotein L, 6##AY014878|APOL5|80831|apolipoprotein L, 5##NM_030642|APOL5|80831|apolipoprotein L, 5	0.077973	
chr7	89783660	89783780	reg1003251.p1	14.724	+	BC028365 NM_152706	-1358690	-	BC140826 BC140829 AK056672 AY295769 NM_181646	-1395004	+	BC020600 AF423422 AF423423 AK026806 AK307644 TSC_hg19_v1_chr7_-_87936207 NM_001205315 NM_001205316 NM_024636	-1847506	-	NM_012449 TSC_hg19_v1_chr7_+_89783782 AK308452 BC011802	17	+	AK304076 TSC_hg19_v1_chr7_+_89783791 AF186249	92	+	AF455138 NM_001244944 NM_001244945 NM_152999 AK092666 AX747660 TSC_hg19_v1_chr7_+_89841171 AY008443 AY008444 AY008445 NM_001040665 NM_001244946 AK315043	57395	+	BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62##BC140826|ZNF804B|219578|zinc finger protein 804B##BC140829|ZNF804B|219578|zinc finger protein 804B##AK056672|ZNF804B|219578|zinc finger protein 804B##AY295769|ZNF804B|219578|zinc finger protein 804B##NM_181646|ZNF804B|219578|zinc finger protein 804B##BC020600|STEAP4|79689|STEAP family member 4##AF423422|STEAP4|79689|STEAP family member 4##AF423423|STEAP4|79689|STEAP family member 4##AK026806|STEAP4|79689|STEAP family member 4##AK307644|STEAP4|79689|STEAP family member 4##NM_001205315|STEAP4|79689|STEAP family member 4##NM_001205316|STEAP4|79689|STEAP family member 4##NM_024636|STEAP4|79689|STEAP family member 4##NM_012449|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK308452|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC011802|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK304076|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF186249|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF455138|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244944|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244945|STEAP2|261729|STEAP family member 2, metalloreductase##NM_152999|STEAP2|261729|STEAP family member 2, metalloreductase##AK092666|STEAP2|261729|STEAP family member 2, metalloreductase##AY008443|STEAP2|261729|STEAP family member 2, metalloreductase##AY008444|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040665|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244946|STEAP2|261729|STEAP family member 2, metalloreductase##AK315043|STEAP2|261729|STEAP family member 2, metalloreductase	1.024838	CTCF.p2:-10:0.998
chr1	203456985	203457142	reg1002040.p2	14.723	+	U29089 BC032498 TSC_hg19_v1_chr1_+_203444965	-12103	+	NM_002725 NM_201348 TSC_hg19_v1_chr1_+_203444937	-12154	+	TSC_hg19_v1_chr1_-_203320290 NM_002023	-136775	-	AJ133790 AY077681 NM_014359 AF161702	6218	+	TSC_hg19_v1_chr1_+_203595922 NM_001001396 NM_001684	138846	+	TSC_hg19_v1_chr1_+_203595959 CR936708 CR749393	138896	+	U29089|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##BC032498|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_002725|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_201348|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_002023|FMOD|2331|fibromodulin##AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin##NM_001001396|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_001684|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR936708|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR749393|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4	0.99915	CTCF.p2:4:0.999
chr11	122724801	122724933	reg1002167.p2	14.722	+	BC070266 AK313578 AF001622 NM_019604	-15638	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	-198320	+	BC130361 BC130363 AF303179 NM_001001786	-738006	-	AK097534 BC068507 NM_024806 NM_199124	28564	+	AB231738 NM_001098169	127489	-	AB034951 BC016179 BC016660 BC019816 AF352832 TSC_hg19_v1_chr11_-_122932842 AK222628 AK222785 AK096100 AK129885 AK303935	207957	-	BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63##AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox##AB034951|HSPA8|3312|heat shock 70kDa protein 8##BC016179|HSPA8|3312|heat shock 70kDa protein 8##BC016660|HSPA8|3312|heat shock 70kDa protein 8##BC019816|HSPA8|3312|heat shock 70kDa protein 8##AF352832|HSPA8|3312|heat shock 70kDa protein 8##AK222628|HSPA8|3312|heat shock 70kDa protein 8##AK222785|HSPA8|3312|heat shock 70kDa protein 8##AK096100|HSPA8|3312|heat shock 70kDa protein 8##AK129885|HSPA8|3312|heat shock 70kDa protein 8##AK303935|HSPA8|3312|heat shock 70kDa protein 8	0.997049	CTCF.p2:5:0.997
chr11	75918738	75918863	reg1002206.p1	14.722	+	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	-1288	-	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	-392522	+	NM_003369 TSC_hg19_v1_chr11_+_75526233 AK291011	-392578	+	TSC_hg19_v1_chr11_-_75921806 AK075540	3004	-	TSC_hg19_v1_chr11_-_76091995 AB590785 AF007393 AF081567 HQ258648 NM_004705 AK291843 BC117138 BC117140 BC110304	173208	-	TSC_hg19_v1_chr11_+_76092383 AK125821 BC040665 AK095089	173623	+	BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11##BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##NM_003369|UVRAG|7405|UV radiation resistance associated gene##AK291011|UVRAG|7405|UV radiation resistance associated gene##AK075540|WNT11|7481|wingless-type MMTV integration site family, member 11##AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	0.786633	CTCF.p2:-1:0.787
chr15	60472122	60472249	reg1003356.p1	14.722	+	TSC_hg19_v1_chr15_+_60296509 AK314075	-175636	+	EF565104 TSC_hg19_v1_chr15_+_60296453	-175736	+	AK290944 NM_012182 TSC_hg19_v1_chr15_+_60296425	-175757	+	AB587463 BC068065 BC009564 BC021114 BC052567 BC001388 BC013843 D00017 TSC_hg19_v1_chr15_-_60690186 AK222542 BX640598 AK297923 BC015834 BC023990 BC066955 BC093056 D28364 NM_001002857 NM_001002858 NM_001136015 NM_004039 AK309956 BC016774	217976	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	299089	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	412494	-	AK314075|FOXB1|27023|forkhead box B1##AK290944|FOXB1|27023|forkhead box B1##NM_012182|FOXB1|27023|forkhead box B1##BC068065|ANXA2|302|annexin A2##BC009564|ANXA2|302|annexin A2##BC021114|ANXA2|302|annexin A2##BC052567|ANXA2|302|annexin A2##BC001388|ANXA2|302|annexin A2##BC013843|ANXA2|302|annexin A2##D00017|ANXA2|302|annexin A2##AK222542|ANXA2|302|annexin A2##BX640598|ANXA2|302|annexin A2##AK297923|ANXA2|302|annexin A2##BC015834|ANXA2|302|annexin A2##BC023990|ANXA2|302|annexin A2##BC066955|ANXA2|302|annexin A2##BC093056|ANXA2|302|annexin A2##D28364|ANXA2|302|annexin A2##NM_001002857|ANXA2|302|annexin A2##NM_001002858|ANXA2|302|annexin A2##NM_001136015|ANXA2|302|annexin A2##NM_004039|ANXA2|302|annexin A2##BC016774|ANXA2|302|annexin A2##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A	0.998025	CTCF.p2:-2:0.998
chr2	42323188	42323327	reg1003393.p1	14.722	+	AB528999 TSC_hg19_v1_chr2_+_42275979	-47296	+	TSC_hg19_v1_chr2_+_42275160 NM_138370	-48125	+	AK124893 NM_001242815	-142315	-	TSC_hg19_v1_chr2_+_42396514 AB275889 NM_001145076 NM_019063 AK314702 BC146799 AF177377 BC067777 BC104647 BC140845 AB374363 AB462412 AB384933	73318	+	AF127788 BT007371 CR542208 CU675543 DQ890566 DQ893729 TSC_hg19_v1_chr2_-_42588354 AB007618 BC005251 BC007095 NM_004718	265076	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	397301	-	NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_001145076|EML4|27436|echinoderm microtubule associated protein like 4##NM_019063|EML4|27436|echinoderm microtubule associated protein like 4##AK314702|EML4|27436|echinoderm microtubule associated protein like 4##BC146799|EML4|27436|echinoderm microtubule associated protein like 4##AF177377|EML4|27436|echinoderm microtubule associated protein like 4##BC067777|EML4|27436|echinoderm microtubule associated protein like 4##BC104647|EML4|27436|echinoderm microtubule associated protein like 4##BC140845|EML4|27436|echinoderm microtubule associated protein like 4##AF127788|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BT007371|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##CR542208|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ890566|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ893729|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB007618|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC005251|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC007095|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##NM_004718|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3	0.9989	CTCF.p2:-13:0.999
chr2	71147090	71147211	reg1002514.p2	14.720	+	TSC_hg19_v1_chr2_+_71127738 BC006336 AB527952 BT007035	-19412	+	TSC_hg19_v1_chr2_+_71127724 NM_012476 Y17791	-19431	+	TSC_hg19_v1_chr2_+_71127705 AB593145	-19447	+	AK291121 NM_001692 BC063411 AK313194 AK301542 BC035978 M25809 AK223151 CU687698 CU690248	15892	+	BC035234 NM_001115116 NM_024933	58424	+	BC010656 AK074840 TSC_hg19_v1_chr2_-_71219046	71881	-	BC006336|VAX2|25806|ventral anterior homeobox 2##BT007035|VAX2|25806|ventral anterior homeobox 2##NM_012476|VAX2|25806|ventral anterior homeobox 2##Y17791|VAX2|25806|ventral anterior homeobox 2##AB593145|VAX2|25806|ventral anterior homeobox 2##AK291121|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##NM_001692|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC063411|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK313194|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK301542|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC035978|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##M25809|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK223151|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC035234|ANKRD53|79998|ankyrin repeat domain 53##NM_001115116|ANKRD53|79998|ankyrin repeat domain 53##NM_024933|ANKRD53|79998|ankyrin repeat domain 53##BC010656|TEX261|113419|testis expressed 261##AK074840|TEX261|113419|testis expressed 261	0.944733	CTCF.p2:-6:0.945
chr4	130562452	130562581	reg1002999.p1	14.719	+	NM_001099783	-545235	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-547649	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-547926	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	3507940	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	3510767	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	4560402	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.847625	CTCF.p2:8:0.848
chr5	171615771	171615906	reg1001950.p2	14.719	+	TSC_hg19_v1_chr5_-_171615363 NM_005990	-466	-	TSC_hg19_v1_chr5_-_171615241 BC070077 AK313350	-565	-	AK307943 TSC_hg19_v1_chr5_-_171615203	-635	-	NM_001171183	5337	+	BC019910 TSC_hg19_v1_chr5_-_171710765 AK313274	94866	-	NM_152277 TSC_hg19_v1_chr5_-_171710808	94977	-	NM_005990|STK10|6793|serine/threonine kinase 10##BC070077|STK10|6793|serine/threonine kinase 10##AK313350|STK10|6793|serine/threonine kinase 10##AK307943|STK10|6793|serine/threonine kinase 10##NM_001171183|EFCAB9|285588|EF-hand calcium binding domain 9##BC019910|UBTD2|92181|ubiquitin domain containing 2##AK313274|UBTD2|92181|ubiquitin domain containing 2##NM_152277|UBTD2|92181|ubiquitin domain containing 2	0.476954	CTCF.p2:8:0.477
chr9	26326611	26326723	reg1001871.p2	14.718	+	AK131322 NM_001004352	-259995	+	NM_001004125	-647812	-	BC017510 TSC_hg19_v1_chr9_-_25678278 BC046919 AY168647 BC110824	-648334	-	AB590748 CU687198 BC071953 TSC_hg19_v1_chr9_-_26892779 AK023719 BC014658 NM_001167575 NM_024828	566102	-	EU176453 EU176795 AB385043 TSC_hg19_v1_chr9_-_26947158 BC032551 AK022761	620437	-	TSC_hg19_v1_chr9_-_26947165 AK001642	620501	-	AK131322|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004352|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004125|TUSC1|286319|tumor suppressor candidate 1##BC017510|TUSC1|286319|tumor suppressor candidate 1##BC046919|TUSC1|286319|tumor suppressor candidate 1##AY168647|TUSC1|286319|tumor suppressor candidate 1##BC110824|TUSC1|286319|tumor suppressor candidate 1##BC071953|C9orf82|79886|chromosome 9 open reading frame 82##AK023719|C9orf82|79886|chromosome 9 open reading frame 82##BC014658|C9orf82|79886|chromosome 9 open reading frame 82##NM_001167575|C9orf82|79886|chromosome 9 open reading frame 82##NM_024828|C9orf82|79886|chromosome 9 open reading frame 82##EU176453|PLAA|9373|phospholipase A2-activating protein##EU176795|PLAA|9373|phospholipase A2-activating protein##BC032551|PLAA|9373|phospholipase A2-activating protein##AK022761|PLAA|9373|phospholipase A2-activating protein##AK001642|PLAA|9373|phospholipase A2-activating protein	0.988163	CTCF.p2:6:0.988
chr17	39894376	39894500	reg1002244.p1	14.717	+	AB209105 AB463758 AK022007 AF040723 NM_001079870 NM_001079871 NM_177977	-3549	-	NM_000805 BC069724 BC069762	-25844	+	TSC_hg19_v1_chr17_+_39845142 BC005118 L26247 AF083441 BC008710 AF100737 AJ012375 DQ896700 EU176404 BT006645 CR457051	-49222	+	TSC_hg19_v1_chr17_-_39928100 AB384746 CU680086	33664	-	DQ891420 DQ894594 AY243535 TSC_hg19_v1_chr17_-_39928132	33683	-	TSC_hg19_v1_chr17_-_39942964 AK226051 M23410 Z68228 BC000441 AK293479 NM_002230 NM_021991	48545	-	AB209105|HAP1|9001|huntingtin-associated protein 1##AK022007|HAP1|9001|huntingtin-associated protein 1##AF040723|HAP1|9001|huntingtin-associated protein 1##NM_001079870|HAP1|9001|huntingtin-associated protein 1##NM_001079871|HAP1|9001|huntingtin-associated protein 1##NM_177977|HAP1|9001|huntingtin-associated protein 1##NM_000805|GAST|2520|gastrin##BC069724|GAST|2520|gastrin##BC069762|GAST|2520|gastrin##BC005118|EIF1|10209|eukaryotic translation initiation factor 1##L26247|EIF1|10209|eukaryotic translation initiation factor 1##AF083441|EIF1|10209|eukaryotic translation initiation factor 1##BC008710|EIF1|10209|eukaryotic translation initiation factor 1##AF100737|EIF1|10209|eukaryotic translation initiation factor 1##AJ012375|EIF1|10209|eukaryotic translation initiation factor 1##DQ896700|EIF1|10209|eukaryotic translation initiation factor 1##EU176404|EIF1|10209|eukaryotic translation initiation factor 1##BT006645|EIF1|10209|eukaryotic translation initiation factor 1##CR457051|EIF1|10209|eukaryotic translation initiation factor 1##DQ891420|JUP|3728|junction plakoglobin##DQ894594|JUP|3728|junction plakoglobin##AY243535|JUP|3728|junction plakoglobin##AK226051|JUP|3728|junction plakoglobin##M23410|JUP|3728|junction plakoglobin##Z68228|JUP|3728|junction plakoglobin##BC000441|JUP|3728|junction plakoglobin##NM_002230|JUP|3728|junction plakoglobin##NM_021991|JUP|3728|junction plakoglobin	1.032591	CTCF.p2:-15:1.000
chr6	166814398	166814516	reg1002326.p1	14.717	+	TSC_hg19_v1_chr6_-_166796469 AF125101 AF151887 NM_016098	-17947	-	CU674406 TSC_hg19_v1_chr6_-_166796429 BC000810 AK312201 AK310934	-18048	-	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	-58423	-	DQ891864 DQ895053 L07598 TSC_hg19_v1_chr6_-_167040629	226120	-	TSC_hg19_v1_chr6_-_167040662 X85106	226212	-	TSC_hg19_v1_chr6_-_167040713 BC002363 NM_021135	226261	-	AF125101|BRP44L|51660|brain protein 44-like##AF151887|BRP44L|51660|brain protein 44-like##NM_016098|BRP44L|51660|brain protein 44-like##BC000810|BRP44L|51660|brain protein 44-like##AK312201|BRP44L|51660|brain protein 44-like##AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1##DQ891864|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##DQ895053|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##L07598|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##X85106|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	0.999139	CTCF.p2:27:0.999
chr6	81315242	81315389	reg1004028.p1	14.717	+	TSC_hg19_v1_chr6_+_80816397 AK289977 BC040139 M55575 AB529112 BT020063 X52446	-498878	+	TSC_hg19_v1_chr6_+_80816387 AK316545 BC034481	-498932	+	TSC_hg19_v1_chr6_+_80816367 NM_000056 NM_183050 AK304353 U50708	-498988	+	AY740520 FJ211061 CU674334 CU675631 TSC_hg19_v1_chr6_-_82461975	1146606	-	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	1147096	-	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	1642098	-	AK289977|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC040139|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##M55575|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BT020063|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##X52446|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK316545|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC034481|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##NM_000056|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##NM_183050|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK304353|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##U50708|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AY740520|FAM46A|55603|family with sequence similarity 46, member A##AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase	0.957879	CTCF.p2:5:0.958
chr17	34296647	34296771	reg1002236.p1	14.716	+	BC054481 NM_001199951	-26023	-	CU691088 AY742214 AY359018 NM_020426	-30250	-	AB528914 EF488474 EF488475 EF488476 EF488477 EF488478 BC032114 AK302782 AB080728 TSC_hg19_v1_chr17_-_34257778 BC127190 BC038301 NM_001034836 NM_001163120 NM_001163121 NM_145654	-38951	-	AB527929 U91746 AF055467 BC096352 BC099662 BC099663 BC099664 AF039955 NM_004590 AB007454 AK309593	11784	-	AB527896 HQ257907 BC038289 BC050647 Z49270 BC045165 NM_032962 NM_032963 TSC_hg19_v1_chr17_-_34313766 AX772826	17030	-	AB463484 AF031587 Z70292 Z70293 TSC_hg19_v1_chr17_-_34328592 U58914	31852	-	BC054481|LYZL6|57151|lysozyme-like 6##NM_001199951|LYZL6|57151|lysozyme-like 6##AY742214|LYZL6|57151|lysozyme-like 6##AY359018|LYZL6|57151|lysozyme-like 6##NM_020426|LYZL6|57151|lysozyme-like 6##EF488474|RDM1|201299|RAD52 motif 1##EF488475|RDM1|201299|RAD52 motif 1##EF488476|RDM1|201299|RAD52 motif 1##EF488477|RDM1|201299|RAD52 motif 1##EF488478|RDM1|201299|RAD52 motif 1##BC032114|RDM1|201299|RAD52 motif 1##AK302782|RDM1|201299|RAD52 motif 1##AB080728|RDM1|201299|RAD52 motif 1##BC127190|RDM1|201299|RAD52 motif 1##BC038301|RDM1|201299|RAD52 motif 1##NM_001034836|RDM1|201299|RAD52 motif 1##NM_001163120|RDM1|201299|RAD52 motif 1##NM_001163121|RDM1|201299|RAD52 motif 1##NM_145654|RDM1|201299|RAD52 motif 1##U91746|CCL16|6360|chemokine (C-C motif) ligand 16##AF055467|CCL16|6360|chemokine (C-C motif) ligand 16##BC096352|CCL16|6360|chemokine (C-C motif) ligand 16##BC099662|CCL16|6360|chemokine (C-C motif) ligand 16##BC099663|CCL16|6360|chemokine (C-C motif) ligand 16##BC099664|CCL16|6360|chemokine (C-C motif) ligand 16##AF039955|CCL16|6360|chemokine (C-C motif) ligand 16##NM_004590|CCL16|6360|chemokine (C-C motif) ligand 16##AB007454|CCL16|6360|chemokine (C-C motif) ligand 16##HQ257907|CCL14|6358|chemokine (C-C motif) ligand 14##BC038289|CCL14|6358|chemokine (C-C motif) ligand 14##BC050647|CCL14|6358|chemokine (C-C motif) ligand 14##Z49270|CCL14|6358|chemokine (C-C motif) ligand 14##BC045165|CCL14|6358|chemokine (C-C motif) ligand 14##NM_032962|CCL14|6358|chemokine (C-C motif) ligand 14##NM_032963|CCL14|6358|chemokine (C-C motif) ligand 14##AF031587|CCL15|6359|chemokine (C-C motif) ligand 15##Z70292|CCL14-CCL15|348249|CCL14-CCL15 readthrough##Z70293|CCL14-CCL15|348249|CCL14-CCL15 readthrough##U58914|CCL15|6359|chemokine (C-C motif) ligand 15	0.962821	CTCF.p2:-12:0.963
chr16	86106551	86106690	reg1004304.p1	14.714	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-173834	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-273285	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-273315	+	TSC_hg19_v1_chr16_-_86542463 AK091834	435844	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	437536	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	437620	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.996785	CTCF.p2:-3:0.997
chr6	91103145	91103272	reg1003497.p1	14.714	+	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-96596	-	AJ271878 TSC_hg19_v1_chr6_-_91006556 NM_021813	-96697	-	AB527151 AF296766 NM_032602	-499022	+	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	193475	-	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	193630	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	3025975	-	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##AF296766|GJA10|84694|gap junction protein, alpha 10, 62kDa##NM_032602|GJA10|84694|gap junction protein, alpha 10, 62kDa##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7	0.998191	CTCF.p2:0:0.998
chr6	53349540	53349677	reg1002947.p1	14.713	+	AK299674 AK302948 TSC_hg19_v1_chr6_-_53213749 AF338241 NM_001242828 NM_001242830 NM_001242831 NM_021814	-135747	-	TSC_hg19_v1_chr6_-_53213736 AB209798 AL136939 BC074503 BC067123	-135887	-	AK125098 TSC_hg19_v1_chr6_-_53213676	-135969	-	TSC_hg19_v1_chr6_-_53409483 AB516284 CU691792 CU692650 EU832317 EU832402	59858	-	TSC_hg19_v1_chr6_-_53409528 BC039894 M90656	59909	-	TSC_hg19_v1_chr6_-_53409821 AB262176 BC022487	60205	-	AK299674|ELOVL5|60481|ELOVL fatty acid elongase 5##AK302948|ELOVL5|60481|ELOVL fatty acid elongase 5##AF338241|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242828|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242830|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242831|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_021814|ELOVL5|60481|ELOVL fatty acid elongase 5##AB209798|ELOVL5|60481|ELOVL fatty acid elongase 5##AL136939|ELOVL5|60481|ELOVL fatty acid elongase 5##BC074503|ELOVL5|60481|ELOVL fatty acid elongase 5##BC067123|ELOVL5|60481|ELOVL fatty acid elongase 5##AK125098|ELOVL5|60481|ELOVL fatty acid elongase 5##AB516284|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EU832317|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EU832402|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC039894|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##M90656|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AB262176|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC022487|GCLC|2729|glutamate-cysteine ligase, catalytic subunit	0.351795	CTCF.p2:23:0.352
chr16	71995439	71995575	reg1003742.p1	14.712	+	TSC_hg19_v1_chr16_+_71929438 AK295066 AK301918 AK057902 AK293022 AK297088 AB097052 D79996 BC000430 BC004359 NM_014761 BC000116	-66064	+	TSC_hg19_v1_chr16_+_71929421 AK291388 AK297336 BC103745	-66093	+	TSC_hg19_v1_chr16_-_71918084 BC012116 AK313693 BC004563 NM_001201552 NM_001201554 NM_001201556	-77463	-	AY164485 NM_181536	38369	-	AK292293 TSC_hg19_v1_chr16_+_72042642 NM_001361 BC065245	47087	+	NM_001126102 NM_005143 AK314700 BC107587 AK055872 BC017862 BC058031 BC070299 K01763 L29394 BC121124 BC121125 X00637 K00422	93016	+	AK295066|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK301918|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK057902|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK293022|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK297088|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AB097052|IST1|9798|increased sodium tolerance 1 homolog (yeast)##D79996|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC000430|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC004359|IST1|9798|increased sodium tolerance 1 homolog (yeast)##NM_014761|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC000116|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK291388|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK297336|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC103745|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC012116|ZNF821|55565|zinc finger protein 821##AK313693|ZNF821|55565|zinc finger protein 821##BC004563|ZNF821|55565|zinc finger protein 821##NM_001201552|ZNF821|55565|zinc finger protein 821##NM_001201554|ZNF821|55565|zinc finger protein 821##NM_001201556|ZNF821|55565|zinc finger protein 821##AY164485|PKD1L3|342372|polycystic kidney disease 1-like 3##NM_181536|PKD1L3|342372|polycystic kidney disease 1-like 3##AK292293|DHODH|1723|dihydroorotate dehydrogenase (quinone)##NM_001361|DHODH|1723|dihydroorotate dehydrogenase (quinone)##BC065245|DHODH|1723|dihydroorotate dehydrogenase (quinone)##NM_001126102|HP|3240|haptoglobin##NM_005143|HP|3240|haptoglobin##AK314700|HP|3240|haptoglobin##BC107587|HP|3240|haptoglobin##AK055872|HP|3240|haptoglobin##BC017862|HP|3240|haptoglobin##BC058031|HP|3240|haptoglobin##BC070299|HP|3240|haptoglobin##K01763|HP|3240|haptoglobin##L29394|HP|3240|haptoglobin##BC121124|HP|3240|haptoglobin##BC121125|HP|3240|haptoglobin##X00637|HP|3240|haptoglobin##K00422|HP|3240|haptoglobin	0.98487	CTCF.p2:13:0.985
chr4	78522144	78522279	reg1003377.p1	14.711	+	AF044197 NM_006419	-89306	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-442718	+	TSC_hg19_v1_chr4_+_78078398 U47414	-443751	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	218333	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	261703	+	NM_001166133 NM_025074 TSC_hg19_v1_chr4_+_78978757 AK096838	456529	+	AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1##NM_001166133|FRAS1|80144|Fraser syndrome 1##NM_025074|FRAS1|80144|Fraser syndrome 1##AK096838|FRAS1|80144|Fraser syndrome 1	0.185651	
chr1	59118375	59118494	reg1002559.p1	14.710	+	NM_002353	-75269	-	BT007255 CR542260 DQ892601 DQ895835 X13425 BC009409 TSC_hg19_v1_chr1_-_59042925	-75557	-	TSC_hg19_v1_chr1_-_59012387 AF263547 NM_145243 AB048348 BC012915 AK308847	-106011	-	TSC_hg19_v1_chr1_-_59147727 BC017579	29312	-	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	47318	-	TSC_hg19_v1_chr1_-_59248287 BC009874	129931	-	NM_002353|TACSTD2|4070|tumor-associated calcium signal transducer 2##BT007255|TACSTD2|4070|tumor-associated calcium signal transducer 2##CR542260|TACSTD2|4070|tumor-associated calcium signal transducer 2##DQ892601|TACSTD2|4070|tumor-associated calcium signal transducer 2##DQ895835|TACSTD2|4070|tumor-associated calcium signal transducer 2##X13425|TACSTD2|4070|tumor-associated calcium signal transducer 2##BC009409|TACSTD2|4070|tumor-associated calcium signal transducer 2##NM_145243|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AB048348|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BC012915|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AK308847|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##BC009874|JUN|3725|jun proto-oncogene	0.996109	CTCF.p2:19:0.996
chr12	39497473	39497600	reg1002371.p1	14.709	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	-198153	-	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-786911	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-5322063	+	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	339463	-	AK314254 NM_005164	516306	-	BC038754 NM_001031748 BC048120 AK097445	522459	+	AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40	0.999842	CTCF.p2:18:1.000
chr19	13708595	13708722	reg1002239.p1	14.709	+	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	-91482	-	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-444478	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-447366	+	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	133921	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	150061	+	TSC_hg19_v1_chr19_+_13875323 NM_001031727 NM_032285	166662	+	AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130##NM_001031727|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)##NM_032285|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	0.461532	CTCF.p2:-17:0.462
chr19	3327095	3327208	reg1002360.p1	14.709	+	BC047522 DQ891648 DQ894837 TSC_hg19_v1_chr19_+_3224751 CU690430 AF329266	-102408	+	BC028101 NM_021938 AB209067 NM_001172673 TSC_hg19_v1_chr19_+_3224705	-102447	+	TSC_hg19_v1_chr19_+_3198814 BC008920	-128326	+	TSC_hg19_v1_chr19_+_3359531 NM_001245005 NM_205843 X12492 AK304816 AK289885	32305	+	TSC_hg19_v1_chr19_+_3366562 NM_001245002 NM_001245004 NM_005597 BC012120	39404	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	39429	+	BC047522|CELF5|60680|CUGBP, Elav-like family member 5##DQ891648|CELF5|60680|CUGBP, Elav-like family member 5##DQ894837|CELF5|60680|CUGBP, Elav-like family member 5##AF329266|CELF5|60680|CUGBP, Elav-like family member 5##BC028101|CELF5|60680|CUGBP, Elav-like family member 5##NM_021938|CELF5|60680|CUGBP, Elav-like family member 5##AB209067|CELF5|60680|CUGBP, Elav-like family member 5##NM_001172673|CELF5|60680|CUGBP, Elav-like family member 5##BC008920|NCLN|56926|nicalin##NM_001245005|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_205843|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X12492|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK304816|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK289885|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245002|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245004|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_005597|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC012120|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)	0.948865	CTCF.p2:-8:0.949
chr12	125256478	125256616	reg1003072.p1	14.708	+	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	-204472	-	TSC_hg19_v1_chr12_-_125002875 BC033087	-253688	-	AK126577 NM_181709	-482838	+	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	91758	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	91830	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	91926	-	AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1	0.633818	CTCF.p2:17:0.634
chr1	151072391	151072510	reg1002444.p2	14.707	+	BC027033 NM_144618 TSC_hg19_v1_chr1_+_151043238 AK092230 AX747418 AK313606 AK301882	-29266	+	TSC_hg19_v1_chr1_+_151032908 BC019253	-39541	+	AK057755 TSC_hg19_v1_chr1_+_151032886 BC007079 BC008445	-39564	+	AF339152 AF339153 AF339154 AB022434 AB058772 TSC_hg19_v1_chr1_-_151119105 AK302862 AK311613 NM_001178061 NM_001178062 NM_030913	46597	-	NM_001204848 NM_024575 AF271774 AL833373 AK027120 AK225472 TSC_hg19_v1_chr1_+_151129149 BC063014	56680	+	TSC_hg19_v1_chr1_-_151138337 BX647911 NM_212551 AK298706 NM_001136543	65926	-	BC027033|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##NM_144618|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##AK092230|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##AK313606|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##AK301882|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##BC019253|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##AF339152|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AF339153|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AF339154|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AB022434|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AB058772|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AK302862|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AK311613|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##NM_001178061|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##NM_001178062|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##NM_030913|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##NM_001204848|TNFAIP8L2-SCNM1|100534012|TNFAIP8L2-SCNM1 readthrough##NM_024575|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##AF271774|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##AL833373|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##AK027120|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##AK225472|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##BC063014|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##BX647911|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##NM_212551|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##AK298706|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##NM_001136543|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1	0.99889	CTCF.p2:2:0.999
chr1	233576721	233576867	reg1002411.p1	14.707	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	-113211	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	-145311	-	TSC_hg19_v1_chr1_+_233086381 AF416713	-490405	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	173029	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	173125	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	463818	+	AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3	0.0	
chr14	58968085	58968207	reg1003237.p1	14.707	+	AK302579 NM_001244193 AK310356 AK302718	-61720	+	NM_014749 BC066647	-73415	+	TSC_hg19_v1_chr14_+_58894445 AK126155	-73725	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	136600	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	687258	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	963776	-	AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135	0.614001	CTCF.p2:-14:0.614
chr1	223307121	223307251	reg1003353.p1	14.706	+	TSC_hg19_v1_chr1_+_222988422 NM_032890	-318795	+	AK125494 NM_207468	-396629	+	TSC_hg19_v1_chr1_+_222886732 AK315930 AK293974	-420453	+	TSC_hg19_v1_chr1_-_223316591 NM_003268	9420	-	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	230285	-	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	259579	+	NM_032890|DISP1|84976|dispatched homolog 1 (Drosophila)##AK125494|FAM177B|400823|family with sequence similarity 177, member B##NM_207468|FAM177B|400823|family with sequence similarity 177, member B##AK315930|BROX|148362|BRO1 domain and CAAX motif containing##AK293974|BROX|148362|BRO1 domain and CAAX motif containing##NM_003268|TLR5|7100|toll-like receptor 5##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4##NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65	0.997578	CTCF.p2:0:0.998
chr9	128137105	128137235	reg1003148.p1	14.705	+	TSC_hg19_v1_chr9_+_128024122 AK056493 NM_015635 AB040954 BC114937 BC114962	-113021	+	TSC_hg19_v1_chr9_+_128024104 BC110990	-113066	+	TSC_hg19_v1_chr9_+_128024097 AK296381	-113072	+	TSC_hg19_v1_chr9_-_128469297 M37191	332140	-	TSC_hg19_v1_chr9_-_128469466 AK290060	332297	-	AL833042 TSC_hg19_v1_chr9_-_128469485 AY633624 AY633625 AY633626 BC002326 BC003044	332309	-	AK056493|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##NM_015635|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AB040954|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114937|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114962|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC110990|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AK296381|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##M37191|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AK290060|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AL833042|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633624|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633625|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633626|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC002326|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC003044|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1	0.981679	CTCF.p2:12:0.982
chr13	28400847	28400952	reg1003023.p1	14.703	+	AB044157 NM_145657 AB463700	-34098	+	AK000623 TSC_hg19_v1_chr13_+_28196032 AB464657 AB527907 CU677257	-204825	+	TSC_hg19_v1_chr13_+_28196028 AF077044 AK097973 AK311833	-204873	+	TSC_hg19_v1_chr13_+_28494136 NM_000209 X99894 U30329 U35632 AB464648	93305	+	CU677005 AB463470 DQ893626 EU176674 U51096 TSC_hg19_v1_chr13_-_28543282	142313	-	TSC_hg19_v1_chr13_-_28543325 BC014461 NM_001265	142409	-	AB044157|GSX1|219409|GS homeobox 1##NM_145657|GSX1|219409|GS homeobox 1##AK000623|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AF077044|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK097973|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK311833|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##NM_000209|PDX1|3651|pancreatic and duodenal homeobox 1##X99894|PDX1|3651|pancreatic and duodenal homeobox 1##U30329|PDX1|3651|pancreatic and duodenal homeobox 1##U35632|PDX1|3651|pancreatic and duodenal homeobox 1##DQ893626|CDX2|1045|caudal type homeobox 2##EU176674|CDX2|1045|caudal type homeobox 2##U51096|CDX2|1045|caudal type homeobox 2##BC014461|CDX2|1045|caudal type homeobox 2##NM_001265|CDX2|1045|caudal type homeobox 2	0.027129	
chr16	21311998	21312117	reg1002163.p1	14.702	+	BC018061 AK290852 TSC_hg19_v1_chr16_-_21289660	-22409	-	CU676152 DQ892377 DQ895591 AK310424 U85772 L02950 TSC_hg19_v1_chr16_-_21289612 BC008398	-22464	-	AK096138 NM_145865 TSC_hg19_v1_chr16_+_21245019 BC111784 BC112368	-67037	+	BX648477 NM_001014444 NM_001888	2330	-	BC036263 NM_130464	124600	-	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	219695	-	BC018061|CRYM|1428|crystallin, mu##AK290852|CRYM|1428|crystallin, mu##DQ892377|CRYM|1428|crystallin, mu##DQ895591|CRYM|1428|crystallin, mu##AK310424|CRYM|1428|crystallin, mu##U85772|CRYM|1428|crystallin, mu##L02950|CRYM|1428|crystallin, mu##BC008398|CRYM|1428|crystallin, mu##AK096138|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##NM_145865|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##BC111784|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##BC112368|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##BX648477|CRYM|1428|crystallin, mu##NM_001014444|CRYM|1428|crystallin, mu##NM_001888|CRYM|1428|crystallin, mu##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2	0.792239	CTCF.p2:-7:0.792
chr17	62106373	62106493	reg1003614.p1	14.702	+	TSC_hg19_v1_chr17_-_62097985 AK295382 AK309953 NM_001099786 NM_001099787 NM_001099788 NM_001099789	-8451	-	NM_000873 TSC_hg19_v1_chr17_-_62084314	-22128	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	-30671	+	TSC_hg19_v1_chr17_-_62207401 AB385116 BC130405 BC130407	100965	-	AF059198 AB209869 TSC_hg19_v1_chr17_-_62207502 NM_001433 AK292403	101083	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	234153	-	AK295382|ICAM2|3384|intercellular adhesion molecule 2##NM_001099786|ICAM2|3384|intercellular adhesion molecule 2##NM_001099787|ICAM2|3384|intercellular adhesion molecule 2##NM_001099788|ICAM2|3384|intercellular adhesion molecule 2##NM_001099789|ICAM2|3384|intercellular adhesion molecule 2##NM_000873|ICAM2|3384|intercellular adhesion molecule 2##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##BC130405|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130407|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AF059198|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AB209869|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##NM_001433|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK292403|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2	0.999648	CTCF.p2:-9:1.000
chr2	152893533	152893644	reg1001693.p1	14.702	+	AY054985 AK290049 NM_001005747	-63122	-	TSC_hg19_v1_chr2_-_152684998 NM_001037174 NM_012097 NM_177985	-208592	-	TSC_hg19_v1_chr2_-_152684936 AF087889 AK298937	-208642	-	AK294398 AK316045 TSC_hg19_v1_chr2_-_152955250 NM_001005746	61642	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	61959	-	TSC_hg19_v1_chr2_-_152955813 AK291378	62223	-	AY054985|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK290049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005747|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001037174|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_012097|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_177985|ARL5A|26225|ADP-ribosylation factor-like 5A##AF087889|ARL5A|26225|ADP-ribosylation factor-like 5A##AK298937|ARL5A|26225|ADP-ribosylation factor-like 5A##AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK291378|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	0.952459	CTCF.p2:-27:0.952
chr7	23752129	23752276	reg1003280.p1	14.701	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-2286	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	-32379	+	TSC_hg19_v1_chr7_+_23637005 NM_138771 AK289911 AY358713 AX721042	-115187	+	BC029497 NM_000905 AK312156 K01911 M15789	571641	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	860886	+	TSC_hg19_v1_chr7_-_24797042 BC099911	1044835	-	AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##NM_138771|CCDC126|90693|coiled-coil domain containing 126##AK289911|CCDC126|90693|coiled-coil domain containing 126##AY358713|CCDC126|90693|coiled-coil domain containing 126##BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC099911|DFNA5|1687|deafness, autosomal dominant 5	0.02028	
chr19	10138505	10138641	reg1003383.p1	14.700	+	DQ426888 AF229845 NM_015725	-14681	+	TSC_hg19_v1_chr19_-_10121181 AF177941 NM_015719	-17430	-	TSC_hg19_v1_chr19_-_10047187 CU679906 DQ891083 DQ894265 AF131839 BC011361 NM_058164	-91449	-	TSC_hg19_v1_chr19_+_10196791 NM_018381	58213	+	BC026180 TSC_hg19_v1_chr19_+_10197007 AK002148 BC010847 BC035817	58424	+	TSC_hg19_v1_chr19_+_10197045 AL137694 CU690214	58489	+	AF229845|RDH8|50700|retinol dehydrogenase 8 (all-trans)##NM_015725|RDH8|50700|retinol dehydrogenase 8 (all-trans)##AF177941|COL5A3|50509|collagen, type V, alpha 3##NM_015719|COL5A3|50509|collagen, type V, alpha 3##DQ891083|OLFM2|93145|olfactomedin 2##DQ894265|OLFM2|93145|olfactomedin 2##AF131839|OLFM2|93145|olfactomedin 2##BC011361|OLFM2|93145|olfactomedin 2##NM_058164|OLFM2|93145|olfactomedin 2##NM_018381|C19orf66|55337|chromosome 19 open reading frame 66##BC026180|C19orf66|55337|chromosome 19 open reading frame 66##AK002148|C19orf66|55337|chromosome 19 open reading frame 66##BC010847|C19orf66|55337|chromosome 19 open reading frame 66##BC035817|C19orf66|55337|chromosome 19 open reading frame 66##AL137694|C19orf66|55337|chromosome 19 open reading frame 66	0.997435	CTCF.p2:-2:0.997
chr19	14685130	14685243	reg1001983.p1	14.700	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	-2337	-	TSC_hg19_v1_chr19_+_14640435 AK001416 AK315412 BC007801 BC013881 BC005952 AF038958 BC002425 BC034484 AF222742 AX771269 AF038959 AB529027 DQ891949 DQ895135 EU832830 GQ129437	-44727	+	AK094087 TSC_hg19_v1_chr19_+_14640406	-44780	+	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	8728	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	100491	-	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	115578	+	CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AK001416|TECR|9524|trans-2,3-enoyl-CoA reductase##AK315412|TECR|9524|trans-2,3-enoyl-CoA reductase##BC007801|TECR|9524|trans-2,3-enoyl-CoA reductase##BC013881|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005952|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038958|TECR|9524|trans-2,3-enoyl-CoA reductase##BC002425|TECR|9524|trans-2,3-enoyl-CoA reductase##BC034484|TECR|9524|trans-2,3-enoyl-CoA reductase##AF222742|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038959|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ891949|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ895135|TECR|9524|trans-2,3-enoyl-CoA reductase##EU832830|TECR|9524|trans-2,3-enoyl-CoA reductase##GQ129437|TECR|9524|trans-2,3-enoyl-CoA reductase##AK094087|TECR|9524|trans-2,3-enoyl-CoA reductase##NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333	0.90764	CTCF.p2:-22:0.908
chrX	106961414	106961549	reg1003233.p1	14.700	+	AF153603 AF228339 AB025432 AF183393 BC072446 TSC_hg19_v1_chrX_-_106960293 AL110191 NM_004089 CR933650	-1200	-	CR533450 EU831656 EU831739 TSC_hg19_v1_chrX_-_106960193 AK311834 AY007119 AK127938	-1352	-	BC018148 Z50781 NM_001015881	-1828	-	AK300535 TSC_hg19_v1_chrX_-_107018990 AK092669 AX747661	57458	-	TSC_hg19_v1_chrX_-_107019012 NM_198057	57527	-	TSC_hg19_v1_chrX_+_107069107 NM_012216 NM_052817	107622	+	AF153603|TSC22D3|1831|TSC22 domain family, member 3##AF228339|TSC22D3|1831|TSC22 domain family, member 3##AB025432|TSC22D3|1831|TSC22 domain family, member 3##AF183393|TSC22D3|1831|TSC22 domain family, member 3##BC072446|TSC22D3|1831|TSC22 domain family, member 3##AL110191|TSC22D3|1831|TSC22 domain family, member 3##NM_004089|TSC22D3|1831|TSC22 domain family, member 3##CR933650|TSC22D3|1831|TSC22 domain family, member 3##CR533450|TSC22D3|1831|TSC22 domain family, member 3##EU831656|TSC22D3|1831|TSC22 domain family, member 3##EU831739|TSC22D3|1831|TSC22 domain family, member 3##AK311834|TSC22D3|1831|TSC22 domain family, member 3##AY007119|TSC22D3|1831|TSC22 domain family, member 3##AK127938|TSC22D3|1831|TSC22 domain family, member 3##BC018148|TSC22D3|1831|TSC22 domain family, member 3##Z50781|TSC22D3|1831|TSC22 domain family, member 3##NM_001015881|TSC22D3|1831|TSC22 domain family, member 3##AK300535|TSC22D3|1831|TSC22 domain family, member 3##AK092669|TSC22D3|1831|TSC22 domain family, member 3##NM_198057|TSC22D3|1831|TSC22 domain family, member 3##NM_012216|MID2|11043|midline 2##NM_052817|MID2|11043|midline 2	1.179087	CTCF.p2:-2:0.711	CTCF.p2:24:0.468
chr20	20645584	20645716	reg1002263.p1	14.699	+	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	-296896	+	NM_001167816 AL117439	-608330	+	BC144222 AF255443 AF318303 AF318304 AF318305 NM_016652	-608963	-	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	47578	-	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	461014	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	461077	+	M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1##BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1	0.425217	CTCF.p2:-19:0.425
chr4	154354345	154354466	reg1002037.p1	14.697	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-88530	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-88618	+	TSC_hg19_v1_chr4_+_154178530 BC025417	-175866	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	33087	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	250993	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	251025	+	AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC025417|TRIM2|23321|tripartite motif containing 2##NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2	0.0	
chr9	89939640	89939777	reg1003312.p1	14.697	+	AK127445 NM_001001709 BC132741 BC136791 HQ258059	-176107	+	L13698 NM_002048	-377605	-	TSC_hg19_v1_chr9_-_88969326 AL832193 CR936608 AK055546 CR933644 AL832026 BX641077 CR933643 BC111003 NM_001185059 NM_001185074 NM_024617	-970335	-	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	172878	+	TSC_hg19_v1_chr9_+_90112781 NM_004938 X76104 BC003614 AK295119	173160	+	NM_001912 NM_145918 TSC_hg19_v1_chr9_+_90341001	401285	+	AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##L13698|GAS1|2619|growth arrest-specific 1##NM_002048|GAS1|2619|growth arrest-specific 1##AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1##NM_004938|DAPK1|1612|death-associated protein kinase 1##X76104|DAPK1|1612|death-associated protein kinase 1##AK295119|DAPK1|1612|death-associated protein kinase 1##NM_001912|CTSL1|1514|cathepsin L1##NM_145918|CTSL1|1514|cathepsin L1	0.0	
chr11	60113118	60113242	reg1003859.p1	14.696	+	BC101783 AF333758 AF354931 BC069322 NM_139249 GQ129453 GQ129454 AF354933 BC034588 AF354932	-10798	+	NM_001243266 NM_024021 NM_148975 AK292089 AK075081 TSC_hg19_v1_chr11_+_60048138 BC020648 CU676600 DQ891395 DQ894573 AB022821 AK314033 AB013102	-65087	+	AK291870 NM_001247999 NM_152852	-161042	-	AK075106 NM_021201 NM_206938 NM_206939 NM_206940 AK297027 TSC_hg19_v1_chr11_+_60146004 BC043485 AF309653 AK309884	32807	+	TSC_hg19_v1_chr11_+_60146063 BC020673 AF237916 AF201951 AF350501	32879	+	NM_001079692 NM_032597	50306	+	BC101783|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF333758|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354931|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC069322|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_139249|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129453|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129454|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354933|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC034588|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354932|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_001243266|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_024021|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_148975|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK292089|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK075081|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC020648|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ891395|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ894573|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB022821|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK314033|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB013102|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK291870|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001247999|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK075106|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_021201|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206938|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206939|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206940|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK297027|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF309653|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK309884|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##BC020673|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF237916|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF201951|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF350501|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_001079692|MS4A14|84689|membrane-spanning 4-domains, subfamily A, member 14##NM_032597|MS4A14|84689|membrane-spanning 4-domains, subfamily A, member 14	0.447369	CTCF.p2:14:0.447
chr10	85631350	85631477	reg1002020.p1	14.694	+	DQ857894 NM_001165973	-1993971	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-1996331	+	AK123978 NM_001145719	-3330839	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	267844	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	300379	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	302146	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.940463	CTCF.p2:18:0.940
chr1	212650605	212650742	reg1002885.p1	14.693	+	TSC_hg19_v1_chr1_+_212606264 AF173937 NM_013349 AK074431 AK223135 AY762102 BC008823 AB126219 AF049672	-44361	+	TSC_hg19_v1_chr1_-_212588248 AK297200 NM_001198862 AK024066 NM_018252	-62421	-	TSC_hg19_v1_chr1_-_212588235 AK001736	-62438	-	NM_001030287	88002	+	NM_001040619 NM_001206484 NM_001206488 NM_001674 TSC_hg19_v1_chr1_+_212782102 AK294296	131362	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	131434	+	AF173937|NENF|29937|neudesin neurotrophic factor##NM_013349|NENF|29937|neudesin neurotrophic factor##AK074431|NENF|29937|neudesin neurotrophic factor##AK223135|NENF|29937|neudesin neurotrophic factor##AY762102|NENF|29937|neudesin neurotrophic factor##BC008823|NENF|29937|neudesin neurotrophic factor##AB126219|NENF|29937|neudesin neurotrophic factor##AF049672|NENF|29937|neudesin neurotrophic factor##AK297200|TMEM206|55248|transmembrane protein 206##NM_001198862|TMEM206|55248|transmembrane protein 206##AK024066|TMEM206|55248|transmembrane protein 206##NM_018252|TMEM206|55248|transmembrane protein 206##AK001736|TMEM206|55248|transmembrane protein 206##NM_001030287|ATF3|467|activating transcription factor 3##NM_001040619|ATF3|467|activating transcription factor 3##NM_001206484|ATF3|467|activating transcription factor 3##NM_001206488|ATF3|467|activating transcription factor 3##NM_001674|ATF3|467|activating transcription factor 3##AK294296|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3	0.945316	CTCF.p2:-1:0.945
chr2	179145125	179145247	reg1003653.p1	14.693	+	TSC_hg19_v1_chr2_+_179059238 AB208898 NM_001201480 NM_001201481 NM_001201482 NM_032523 BC052259 AK300389 AF323728 AF392448	-85962	+	AF526533 BC037837 BC066549 NM_152945 TSC_hg19_v1_chr2_+_178977198 AK126575 AB036991 CU688160	-167975	+	AB038041 NM_001077197	-172121	-	AK093902 AX748360 NM_145739	39784	+	TSC_hg19_v1_chr2_+_179278403 BX538254	133218	+	AY251164 NM_001139518 TSC_hg19_v1_chr2_-_179315397 NM_001139517	170232	-	AB208898|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201480|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201481|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201482|OSBPL6|114880|oxysterol binding protein-like 6##NM_032523|OSBPL6|114880|oxysterol binding protein-like 6##BC052259|OSBPL6|114880|oxysterol binding protein-like 6##AK300389|OSBPL6|114880|oxysterol binding protein-like 6##AF323728|OSBPL6|114880|oxysterol binding protein-like 6##AF392448|OSBPL6|114880|oxysterol binding protein-like 6##AF526533|RBM45|129831|RNA binding motif protein 45##BC037837|RBM45|129831|RNA binding motif protein 45##BC066549|RBM45|129831|RNA binding motif protein 45##NM_152945|RBM45|129831|RNA binding motif protein 45##AK126575|RBM45|129831|RNA binding motif protein 45##AB036991|RBM45|129831|RNA binding motif protein 45##AB038041|PDE11A|50940|phosphodiesterase 11A##NM_001077197|PDE11A|50940|phosphodiesterase 11A##AK093902|OSBPL6|114880|oxysterol binding protein-like 6##NM_145739|OSBPL6|114880|oxysterol binding protein-like 6##AY251164|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_001139518|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_001139517|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator	0.0	
chr6	34427798	34427918	reg1003350.p1	14.692	+	TSC_hg19_v1_chr6_-_34393847 NM_001203245 U14972 BC070235 BC001032 BC071946 AK311797 NM_001014 NM_001202470 NM_001204091	-34009	-	TSC_hg19_v1_chr6_-_34360442 NM_006703	-67407	-	TSC_hg19_v1_chr6_-_34360425 BC007727	-67438	-	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	6046	+	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	54796	+	AB031549 BC021299 AF071538 AK301543 NM_001252294 NM_012391	96238	-	NM_001203245|RPS10|6204|ribosomal protein S10##U14972|RPS10|6204|ribosomal protein S10##BC070235|RPS10|6204|ribosomal protein S10##BC001032|RPS10|6204|ribosomal protein S10##BC071946|RPS10|6204|ribosomal protein S10##AK311797|RPS10|6204|ribosomal protein S10##NM_001014|RPS10|6204|ribosomal protein S10##NM_001202470|RPS10-NUDT3|100529239|RPS10-NUDT3 readthrough##NM_001204091|RPS10|6204|ribosomal protein S10##NM_006703|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##BC007727|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB031549|SPDEF|25803|SAM pointed domain containing ets transcription factor##BC021299|SPDEF|25803|SAM pointed domain containing ets transcription factor##AF071538|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK301543|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_001252294|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_012391|SPDEF|25803|SAM pointed domain containing ets transcription factor	0.987417	CTCF.p2:-1:0.987
chr7	32840222	32840333	reg1002566.p1	14.692	+	TSC_hg19_v1_chr7_+_32767741 AK094370 BC126382 BC126384	-72539	+	TSC_hg19_v1_chr7_+_32535168 AK090619 AX746537 NM_015060 BC027724 CU693288	-305047	+	TSC_hg19_v1_chr7_+_32535132 AL833560	-305182	+	AK292802 BC047107 TSC_hg19_v1_chr7_-_32931241	90984	-	TSC_hg19_v1_chr7_-_32931372 BC037887	91092	-	TSC_hg19_v1_chr7_-_32931481 NM_015483	91174	-	AK094370|ZNRF2P1|441208|zinc and ring finger 2 pseudogene 1##BC126382|ZNRF2P1|441208|zinc and ring finger 2 pseudogene 1##BC126384|ZNRF2P1|441208|zinc and ring finger 2 pseudogene 1##AK090619|AVL9|23080|AVL9 homolog (S. cerevisiase)##NM_015060|AVL9|23080|AVL9 homolog (S. cerevisiase)##BC027724|AVL9|23080|AVL9 homolog (S. cerevisiase)##AL833560|AVL9|23080|AVL9 homolog (S. cerevisiase)##AK292802|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##BC047107|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##BC037887|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##NM_015483|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2	0.830069	CTCF.p2:-26:0.830
chr1	157459281	157459401	reg1003079.p1	14.691	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-351058	-	TSC_hg19_v1_chr1_-_157108158 L16464	-351191	-	AK131392 NM_001004341	-389742	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	62889	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	108460	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	211186	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.287581	CTCF.p2:4:0.288
chr11	88277631	88277771	reg1002412.p2	14.690	+	TSC_hg19_v1_chr11_-_88070905 BX537913 NM_001114173 NM_001814 NM_148170	-206770	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	-206799	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	-206834	-	AY608336 D28538 D28539 NM_001143831	503438	-	AK291362 NM_000842	519114	-	NM_000372 BC027179 M74314 Y00819 U01873 J03581	633379	+	BX537913|CTSC|1075|cathepsin C##NM_001114173|CTSC|1075|cathepsin C##NM_001814|CTSC|1075|cathepsin C##NM_148170|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AY608336|GRM5|2915|glutamate receptor, metabotropic 5##D28538|GRM5|2915|glutamate receptor, metabotropic 5##D28539|GRM5|2915|glutamate receptor, metabotropic 5##NM_001143831|GRM5|2915|glutamate receptor, metabotropic 5##AK291362|GRM5|2915|glutamate receptor, metabotropic 5##NM_000842|GRM5|2915|glutamate receptor, metabotropic 5##NM_000372|TYR|7299|tyrosinase (oculocutaneous albinism IA)##BC027179|TYR|7299|tyrosinase (oculocutaneous albinism IA)##M74314|TYR|7299|tyrosinase (oculocutaneous albinism IA)##Y00819|TYR|7299|tyrosinase (oculocutaneous albinism IA)##U01873|TYR|7299|tyrosinase (oculocutaneous albinism IA)##J03581|TYR|7299|tyrosinase (oculocutaneous albinism IA)	0.639906	CTCF.p2:33:0.611
chr9	32579845	32579949	reg1002447.p1	14.689	+	CR456920 TSC_hg19_v1_chr9_-_32573139 AF035840 BC029247 AK289702 AF067167 BC009801 NM_001199987 NM_002493 NM_182739	-6775	-	TSC_hg19_v1_chr9_-_32552585 NM_001195622 NM_005802	-27295	-	AB045732 AB045733 AF098300 TSC_hg19_v1_chr9_-_32552567 BC060884	-27338	-	BC116181 BC116182 AF390562 NM_153809	55743	-	AK125320 NM_212558 BX647550	203619	+	AY208839 AY208836 AY208835 AY208833 NM_001195249 AK131046 AB528955 TSC_hg19_v1_chr9_-_33001627 AY208831 AY208837 AY208834 NM_001195254 AY040777 AY208829 AY208832 BC068107 AY208840 AJ565850 AJ565851 AJ565852 BX538161 AK055672 AY208830 NM_001195248 NM_001195250 NM_001195251 NM_001195252 NM_175069 NM_175073	421681	-	CR456920|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AF035840|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC029247|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AK289702|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AF067167|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC009801|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_001199987|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_002493|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_182739|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_001195622|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##NM_005802|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AB045732|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AB045733|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AF098300|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##BC060884|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##BC116181|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##BC116182|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##AF390562|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##NM_153809|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##AK125320|TMEM215|401498|transmembrane protein 215##NM_212558|TMEM215|401498|transmembrane protein 215##BX647550|TMEM215|401498|transmembrane protein 215##AY208839|APTX|54840|aprataxin##AY208836|APTX|54840|aprataxin##AY208835|APTX|54840|aprataxin##AY208833|APTX|54840|aprataxin##NM_001195249|APTX|54840|aprataxin##AK131046|APTX|54840|aprataxin##AY208831|APTX|54840|aprataxin##AY208837|APTX|54840|aprataxin##AY208834|APTX|54840|aprataxin##NM_001195254|APTX|54840|aprataxin##AY040777|APTX|54840|aprataxin##AY208829|APTX|54840|aprataxin##AY208832|APTX|54840|aprataxin##BC068107|APTX|54840|aprataxin##AY208840|APTX|54840|aprataxin##AJ565850|APTX|54840|aprataxin##AJ565851|APTX|54840|aprataxin##AJ565852|APTX|54840|aprataxin##BX538161|APTX|54840|aprataxin##AK055672|APTX|54840|aprataxin##AY208830|APTX|54840|aprataxin##NM_001195248|APTX|54840|aprataxin##NM_001195250|APTX|54840|aprataxin##NM_001195251|APTX|54840|aprataxin##NM_001195252|APTX|54840|aprataxin##NM_175069|APTX|54840|aprataxin##NM_175073|APTX|54840|aprataxin	0.867974	CTCF.p2:8:0.868
chr15	42352023	42352149	reg1003198.p1	14.687	+	NM_001206670	-9186	-	AK074621 AK292634 TSC_hg19_v1_chr15_-_42264753 AK024902 NM_139265	-87333	-	TSC_hg19_v1_chr15_-_42264741 CU690850 DQ892745 DQ895991 BC077716 AF454953 BC006287 AF307137 AF323924 BC051823	-87370	-	AB527201 AB090876 NM_178034	34618	-	BC111481 BC035335 AK122623 BC142682 BC146648 BC131531 AK304368 AK172836 NM_213600	96717	-	TSC_hg19_v1_chr15_-_42500479 AF280814 CU686671 AM392538 AM393769 AB018313	148321	-	NM_001206670|PLA2G4E|123745|phospholipase A2, group IVE##AK074621|EHD4|30844|EH-domain containing 4##AK292634|EHD4|30844|EH-domain containing 4##AK024902|EHD4|30844|EH-domain containing 4##NM_139265|EHD4|30844|EH-domain containing 4##DQ892745|EHD4|30844|EH-domain containing 4##DQ895991|EHD4|30844|EH-domain containing 4##BC077716|EHD4|30844|EH-domain containing 4##AF454953|EHD4|30844|EH-domain containing 4##BC006287|EHD4|30844|EH-domain containing 4##AF307137|EHD4|30844|EH-domain containing 4##AF323924|EHD4|30844|EH-domain containing 4##BC051823|EHD4|30844|EH-domain containing 4##AB090876|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##NM_178034|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##BC111481|PLA2G4F|255189|phospholipase A2, group IVF##BC035335|PLA2G4F|255189|phospholipase A2, group IVF##AK122623|PLA2G4F|255189|phospholipase A2, group IVF##BC142682|PLA2G4F|255189|phospholipase A2, group IVF##BC146648|PLA2G4F|255189|phospholipase A2, group IVF##BC131531|PLA2G4F|255189|phospholipase A2, group IVF##AK304368|PLA2G4F|255189|phospholipase A2, group IVF##AK172836|PLA2G4F|255189|phospholipase A2, group IVF##NM_213600|PLA2G4F|255189|phospholipase A2, group IVF##AF280814|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AM392538|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AM393769|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AB018313|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)	0.988741	CTCF.p2:4:0.989
chr3	13537905	13538025	reg1003256.p1	14.687	+	NM_024827 TSC_hg19_v1_chr3_+_13521806 AK299021 AK025426 AK025890 BC009676 NM_001136041 AK293223	-16153	+	TSC_hg19_v1_chr3_-_13461832 BC020573 NM_024923	-76148	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	-76233	-	AK129883 NM_001004019 NM_001998 TSC_hg19_v1_chr3_+_13590624	52660	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	52698	+	AK304827 NM_001165035	72274	+	NM_024827|HDAC11|79885|histone deacetylase 11##AK299021|HDAC11|79885|histone deacetylase 11##AK025426|HDAC11|79885|histone deacetylase 11##AK025890|HDAC11|79885|histone deacetylase 11##BC009676|HDAC11|79885|histone deacetylase 11##NM_001136041|HDAC11|79885|histone deacetylase 11##AK293223|HDAC11|79885|histone deacetylase 11##BC020573|NUP210|23225|nucleoporin 210kDa##NM_024923|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa##AK129883|FBLN2|2199|fibulin 2##NM_001004019|FBLN2|2199|fibulin 2##NM_001998|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2##AK304827|FBLN2|2199|fibulin 2##NM_001165035|FBLN2|2199|fibulin 2	0.967909	CTCF.p2:-6:0.896
chr15	90830030	90830155	reg1003600.p1	14.686	+	TSC_hg19_v1_chr15_+_90808921 AB029315 NM_001033088 AL834503 BC007222 AL360142 AK312641 BC017192 BC019023 AF242770 AL355700 BC009389 BC096824 AF225423	-21172	+	TSC_hg19_v1_chr15_+_90792763 BC036668 NM_001029964 AK127965 BC052201	-37317	+	TSC_hg19_v1_chr15_+_90777469 BC127821 NM_001013657	-52618	+	AK289385 NM_001004309 BC067279 CR749343	65431	+	BC151834 D29640 TSC_hg19_v1_chr15_+_90931449	101362	+	TSC_hg19_v1_chr15_+_90931479 NM_003870	101385	+	AB029315|NGRN|51335|neugrin, neurite outgrowth associated##NM_001033088|NGRN|51335|neugrin, neurite outgrowth associated##AL834503|NGRN|51335|neugrin, neurite outgrowth associated##BC007222|NGRN|51335|neugrin, neurite outgrowth associated##AL360142|NGRN|51335|neugrin, neurite outgrowth associated##AK312641|NGRN|51335|neugrin, neurite outgrowth associated##BC017192|NGRN|51335|neugrin, neurite outgrowth associated##BC019023|NGRN|51335|neugrin, neurite outgrowth associated##AF242770|NGRN|51335|neugrin, neurite outgrowth associated##AL355700|NGRN|51335|neugrin, neurite outgrowth associated##BC009389|NGRN|51335|neugrin, neurite outgrowth associated##BC096824|NGRN|51335|neugrin, neurite outgrowth associated##AF225423|NGRN|51335|neugrin, neurite outgrowth associated##BC036668|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##NM_001029964|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##AK127965|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##BC127821|C15orf58|390637|chromosome 15 open reading frame 58##NM_001013657|C15orf58|390637|chromosome 15 open reading frame 58##AK289385|ZNF774|342132|zinc finger protein 774##NM_001004309|ZNF774|342132|zinc finger protein 774##BC067279|ZNF774|342132|zinc finger protein 774##CR749343|ZNF774|342132|zinc finger protein 774##BC151834|IQGAP1|8826|IQ motif containing GTPase activating protein 1##D29640|IQGAP1|8826|IQ motif containing GTPase activating protein 1##NM_003870|IQGAP1|8826|IQ motif containing GTPase activating protein 1	0.051822	
chr5	6745849	6745994	reg1003334.p1	14.686	+	NM_001171805 NM_006999 AF089896 BC084567	-31171	+	M32313 TSC_hg19_v1_chr5_+_6633683 BT006834 CU679027 DQ891537 DQ894726	-112247	+	AF113128 AK297208 AK297511 TSC_hg19_v1_chr5_+_6633541 AK313070 BC007033 AF052126 BC008673 AK315996 BC006373	-112365	+	AK308405 NM_001171806 AK303516	201	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	650347	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	1105338	-	NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##M32313|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##BT006834|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##DQ891537|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##DQ894726|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##AF113128|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##AK297208|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##AK297511|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##AK313070|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##BC007033|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##AF052126|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##BC008673|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##AK315996|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##BC006373|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49	0.371321	CTCF.p2:14:0.371
chr22	23470718	23470845	reg1002283.p2	14.685	+	AK312519 TSC_hg19_v1_chr22_+_23412728 AK293653	-58052	+	TSC_hg19_v1_chr22_+_23412527 BC037333 BC026342 NM_002073	-58265	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	-240698	+	BC008986 AF133587 NM_014433 AK299530 AK310327	13462	-	AB023061 NM_004914 BC104989 BC104991 CR456553 AF133588 AB527204 AY336745 CU013153 CU013441 AK296052 TSC_hg19_v1_chr22_+_23487674	16823	+	NM_004327 NM_021574 Y00661 TSC_hg19_v1_chr22_+_23522690	51839	+	AK312519|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK293653|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC037333|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC026342|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##NM_002073|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1##AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1##NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1##AB023061|RAB36|9609|RAB36, member RAS oncogene family##NM_004914|RAB36|9609|RAB36, member RAS oncogene family##BC104989|RAB36|9609|RAB36, member RAS oncogene family##BC104991|RAB36|9609|RAB36, member RAS oncogene family##CR456553|RAB36|9609|RAB36, member RAS oncogene family##AF133588|RAB36|9609|RAB36, member RAS oncogene family##AY336745|RAB36|9609|RAB36, member RAS oncogene family##CU013153|RAB36|9609|RAB36, member RAS oncogene family##CU013441|RAB36|9609|RAB36, member RAS oncogene family##AK296052|RAB36|9609|RAB36, member RAS oncogene family##NM_004327|BCR|613|breakpoint cluster region##NM_021574|BCR|613|breakpoint cluster region##Y00661|BCR|613|breakpoint cluster region	0.988245	CTCF.p2:15:0.988
chr7	4793629	4793747	reg1003130.p1	14.685	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	-71437	+	TSC_hg19_v1_chr7_+_4721925 NM_001037165	-71850	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	-1452689	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	21573	+	TSC_hg19_v1_chr7_+_4815296 AB007875	21598	+	DQ891226 DQ894411 AF218840 BC036653 NM_020144 TSC_hg19_v1_chr7_-_4901662 AK312788	107861	-	AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##NM_001037165|FOXK1|221937|forkhead box K1##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415##AB007875|KIAA0415|9907|KIAA0415##DQ891226|PAPOLB|56903|poly(A) polymerase beta (testis specific)##DQ894411|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AF218840|PAPOLB|56903|poly(A) polymerase beta (testis specific)##BC036653|PAPOLB|56903|poly(A) polymerase beta (testis specific)##NM_020144|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AK312788|PAPOLB|56903|poly(A) polymerase beta (testis specific)	0.815026	CTCF.p2:9:0.815
chr5	169652985	169653106	reg1002994.p1	14.684	+	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	-120074	+	AK055998 NM_001129891	-245302	-	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-588745	+	BC030767 NM_001102609 BC092511	6951	+	BT007273 FN432830 DQ890681 DQ893863 AB527802 TSC_hg19_v1_chr5_-_169724688	71606	-	TSC_hg19_v1_chr5_-_169724734 BC016618 AK310369	71710	-	AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58##BT007273|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##FN432830|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ890681|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ893863|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	0.990576	CTCF.p2:-11:0.991
chr1	22290576	22290709	reg1002708.p1	14.683	+	TSC_hg19_v1_chr1_-_22263804 X62515 NM_005529 M85289	-26876	-	AK127275 NM_001013693 BC146860	-151836	+	TSC_hg19_v1_chr1_-_22109701 AK026930 NM_001032730 NM_032236	-180943	-	NM_007352 AK092382 AK308518 AX747509 BC005216 M18692 AK315798 AK308510 M16630	12837	+	BC005918 BC015103 D00306 NM_005747 BC007028 AK225620 AK308514 BC008383 CU675183 CU678941 DQ893182 DQ896490	37515	+	TSC_hg19_v1_chr1_+_22352003 AF161506 BC016053	61370	+	X62515|HSPG2|3339|heparan sulfate proteoglycan 2##NM_005529|HSPG2|3339|heparan sulfate proteoglycan 2##M85289|HSPG2|3339|heparan sulfate proteoglycan 2##AK127275|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001013693|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##BC146860|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001032730|USP48|84196|ubiquitin specific peptidase 48##NM_032236|USP48|84196|ubiquitin specific peptidase 48##NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B##M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A##M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B##BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A##D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AF161506|LINC00339|29092|long intergenic non-protein coding RNA 339##BC016053|LINC00339|29092|long intergenic non-protein coding RNA 339	0.75603	CTCF.p2:12:0.756
chr17	79451396	79451540	reg1002970.p1	14.683	+	NM_001080519	-77929	+	AK096111 NM_178520	-146995	-	TSC_hg19_v1_chr17_-_79269100 NM_001037984 NM_138570	-182375	-	TSC_hg19_v1_chr17_-_79478238 BC009544 BC010417 BC018861 M16247	26942	-	BC023548 TSC_hg19_v1_chr17_-_79478994 BC039144	27510	-	BC001920 BC015779 BC053572 BC015005 BC009848 BC010999 BC007442 BC012050 BC018774 BC015695 BC000292 AK304637 TSC_hg19_v1_chr17_-_79479829 AK291937 AK301175 X04098	28337	-	NM_001080519|BAHCC1|57597|BAH domain and coiled-coil containing 1##AK096111|TMEM105|284186|transmembrane protein 105##NM_178520|TMEM105|284186|transmembrane protein 105##NM_001037984|SLC38A10|124565|solute carrier family 38, member 10##NM_138570|SLC38A10|124565|solute carrier family 38, member 10##BC009544|ACTG1|71|actin, gamma 1##BC010417|ACTG1|71|actin, gamma 1##BC018861|ACTG1|71|actin, gamma 1##M16247|ACTG1|71|actin, gamma 1##BC023548|ACTG1|71|actin, gamma 1##BC039144|ACTG1|71|actin, gamma 1##BC001920|ACTG1|71|actin, gamma 1##BC015779|ACTG1|71|actin, gamma 1##BC053572|ACTG1|71|actin, gamma 1##BC015005|ACTG1|71|actin, gamma 1##BC009848|ACTG1|71|actin, gamma 1##BC010999|ACTG1|71|actin, gamma 1##BC007442|ACTG1|71|actin, gamma 1##BC012050|ACTG1|71|actin, gamma 1##BC018774|ACTG1|71|actin, gamma 1##BC015695|ACTG1|71|actin, gamma 1##BC000292|ACTG1|71|actin, gamma 1##AK304637|ACTG1|71|actin, gamma 1##AK291937|ACTG1|71|actin, gamma 1##AK301175|ACTG1|71|actin, gamma 1##X04098|ACTG1|71|actin, gamma 1	0.815413	CTCF.p2:33:0.815
chr2	202725411	202725533	reg1002299.p1	14.683	+	AB053308 AX772791 NM_139158 AK131512 BX647394 BC038807 EU831752 EU831828	-54180	+	NM_001135745 NM_020919	-79578	-	TSC_hg19_v1_chr2_-_202645657 BC071576 AB053305 AB053306 AF391100 AK023024 BC029174 AK291029	-79807	-	AB017365 NM_003507 AB010881 BC015915 CU677505	173867	+	X99586 TSC_hg19_v1_chr2_-_203103288 U38784 U67122 BC053528 AK311840 BC005899 AB062294 BC066306 BC006462 U83117 U61397 NM_001005781 NM_001005782 NM_003352	377796	-	TSC_hg19_v1_chr2_+_203130458 AK300844 AK307396 AL117554 BC001707	404984	+	AB053308|CDK15|65061|cyclin-dependent kinase 15##AX772791|CDK15|65061|cyclin-dependent kinase 15##NM_139158|CDK15|65061|cyclin-dependent kinase 15##AK131512|CDK15|65061|cyclin-dependent kinase 15##BX647394|CDK15|65061|cyclin-dependent kinase 15##BC038807|CDK15|65061|cyclin-dependent kinase 15##EU831752|CDK15|65061|cyclin-dependent kinase 15##EU831828|CDK15|65061|cyclin-dependent kinase 15##NM_001135745|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##NM_020919|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##BC071576|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053305|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053306|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AF391100|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AK023024|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##BC029174|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AK291029|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB017365|FZD7|8324|frizzled family receptor 7##NM_003507|FZD7|8324|frizzled family receptor 7##AB010881|FZD7|8324|frizzled family receptor 7##BC015915|FZD7|8324|frizzled family receptor 7##X99586|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U38784|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U67122|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC053528|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK311840|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC005899|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AB062294|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC066306|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC006462|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U83117|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U61397|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005781|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005782|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_003352|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK300844|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK307396|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AL117554|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC001707|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)	0.998556	CTCF.p2:-9:0.999
chr1	202470541	202470694	reg1003442.p1	14.682	+	AB050641 AB050642 NM_032103 NM_032104	-38747	+	TSC_hg19_v1_chr1_+_202317826 AK307591 NM_001167857 NM_001167858 NM_002481 AB003062 AF324888 BC144699 BC110907 BC034430 BC071166	-152744	+	TSC_hg19_v1_chr1_-_202311082 AF161499 NM_014176	-159531	-	AB588820 NM_001197131 TSC_hg19_v1_chr1_+_202509319	38663	+	AK094430 NM_001136504	141963	-	BC100814 BC100815 BC100816 BC100817 AK090672 NM_177402 TSC_hg19_v1_chr1_-_202679575	208882	-	AB050641|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050642|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032103|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032104|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AK307591|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167857|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167858|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_002481|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB003062|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AF324888|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC144699|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC110907|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC034430|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC071166|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AF161499|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##NM_014176|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AB588820|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001197131|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AK094430|SYT2|127833|synaptotagmin II##NM_001136504|SYT2|127833|synaptotagmin II##BC100814|SYT2|127833|synaptotagmin II##BC100815|SYT2|127833|synaptotagmin II##BC100816|SYT2|127833|synaptotagmin II##BC100817|SYT2|127833|synaptotagmin II##AK090672|SYT2|127833|synaptotagmin II##NM_177402|SYT2|127833|synaptotagmin II	0.981808	CTCF.p2:-12:0.982
chr1	153722003	153722123	reg1002973.p1	14.679	+	TSC_hg19_v1_chr1_+_153700548 BX640950 CR749376 CR627233 BC116458 AK290025 CR749212 BX640786 NM_023015	-21510	+	TSC_hg19_v1_chr1_+_153651222 BC063304 AK025024 NM_000906 X15357	-70767	+	TSC_hg19_v1_chr1_-_153643490 NM_004515	-78573	-	BC003041 BC009916 NM_024330 AK075377 TSC_hg19_v1_chr1_+_153747897 AK123997 AY358409 AK074134 DQ893429 DQ895951 AK027499 BC029792	25803	+	AK094665 NM_020699 TSC_hg19_v1_chr1_-_153895452	173388	-	TSC_hg19_v1_chr1_-_153919148 AB007945 NM_014856	197083	-	BX640950|INTS3|65123|integrator complex subunit 3##CR749376|INTS3|65123|integrator complex subunit 3##CR627233|INTS3|65123|integrator complex subunit 3##BC116458|INTS3|65123|integrator complex subunit 3##AK290025|INTS3|65123|integrator complex subunit 3##CR749212|INTS3|65123|integrator complex subunit 3##BX640786|INTS3|65123|integrator complex subunit 3##NM_023015|INTS3|65123|integrator complex subunit 3##BC063304|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##AK025024|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##NM_000906|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##X15357|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##NM_004515|ILF2|3608|interleukin enhancer binding factor 2, 45kDa##BC003041|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC009916|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##NM_024330|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK075377|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK123997|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AY358409|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK074134|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ893429|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ895951|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK027499|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC029792|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B##NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B##AB007945|DENND4B|9909|DENN/MADD domain containing 4B##NM_014856|DENND4B|9909|DENN/MADD domain containing 4B	0.688451	CTCF.p2:6:0.688
chr18	13824007	13824118	reg1002296.p1	14.678	+	TSC_hg19_v1_chr18_+_13726671 AK296370 BC017816 BX647977 AK303842 BC005290 AK292561 AB007858 AF067791 NM_003799 AB020966 BC036798	-97372	+	TSC_hg19_v1_chr18_-_13726582 AK309506 NM_001098801 NM_152352	-97476	-	TSC_hg19_v1_chr18_-_13726549 AK055618	-97556	-	BC095531 NM_005913	1480	+	AK315319 BC094710 NM_000529 AK289381	91474	-	BC010705 AK096748 BC024227 BC037787 NM_145287	308395	-	AK296370|RNMT|8731|RNA (guanine-7-) methyltransferase##BC017816|RNMT|8731|RNA (guanine-7-) methyltransferase##BX647977|RNMT|8731|RNA (guanine-7-) methyltransferase##AK303842|RNMT|8731|RNA (guanine-7-) methyltransferase##BC005290|RNMT|8731|RNA (guanine-7-) methyltransferase##AK292561|RNMT|8731|RNA (guanine-7-) methyltransferase##AB007858|RNMT|8731|RNA (guanine-7-) methyltransferase##AF067791|RNMT|8731|RNA (guanine-7-) methyltransferase##NM_003799|RNMT|8731|RNA (guanine-7-) methyltransferase##AB020966|RNMT|8731|RNA (guanine-7-) methyltransferase##BC036798|RNMT|8731|RNA (guanine-7-) methyltransferase##AK309506|FAM210A|125228|family with sequence similarity 210, member A##NM_001098801|FAM210A|125228|family with sequence similarity 210, member A##NM_152352|FAM210A|125228|family with sequence similarity 210, member A##AK055618|FAM210A|125228|family with sequence similarity 210, member A##BC095531|MC5R|4161|melanocortin 5 receptor##NM_005913|MC5R|4161|melanocortin 5 receptor##AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC010705|ZNF519|162655|zinc finger protein 519##AK096748|ZNF519|162655|zinc finger protein 519##BC024227|ZNF519|162655|zinc finger protein 519##BC037787|ZNF519|162655|zinc finger protein 519##NM_145287|ZNF519|162655|zinc finger protein 519	0.999352	CTCF.p2:1:0.999
chr2	208339734	208339872	reg1003345.p1	14.674	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-308178	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-309147	-	BC112076 BC112078 NM_173077 AJ422118	-535503	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	54840	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	54918	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	54978	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.99801	CTCF.p2:6:0.998
chr3	197326033	197326145	reg1002615.p1	14.674	+	NM_203315 TSC_hg19_v1_chr3_-_197300209	-25888	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	-43247	-	BC140841 BC144651 TSC_hg19_v1_chr3_-_197025506 AK304280 NM_001098424 NM_001204386 NM_004087 U13896 U13897 AK310596	-300615	-	TSC_hg19_v1_chr3_-_197354756 BC067856 AK309924 BC094848 AK299863 BC080518 AK311713	28664	-	TSC_hg19_v1_chr3_-_197463770 BC033615 NM_014687	137697	-	AK303462 NM_001011537	150334	+	NM_203315|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC140841|DLG1|1739|discs, large homolog 1 (Drosophila)##BC144651|DLG1|1739|discs, large homolog 1 (Drosophila)##AK304280|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001098424|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204386|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_004087|DLG1|1739|discs, large homolog 1 (Drosophila)##U13896|DLG1|1739|discs, large homolog 1 (Drosophila)##U13897|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310596|DLG1|1739|discs, large homolog 1 (Drosophila)##BC067856|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK309924|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC094848|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK299863|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC080518|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK311713|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC033615|KIAA0226|9711|KIAA0226##NM_014687|KIAA0226|9711|KIAA0226##AK303462|FYTTD1|84248|forty-two-three domain containing 1##NM_001011537|FYTTD1|84248|forty-two-three domain containing 1	0.396672	CTCF.p2:-13:0.397
chr12	121533840	121533976	reg1002925.p1	14.673	+	TSC_hg19_v1_chr12_-_121476781 HQ258301 AJ225089 AK314419 NM_003733 NM_198213 AK023956 BC117408 BC117410	-57125	-	TSC_hg19_v1_chr12_-_121454291 AK222630 AK299170 AK301566 AK022510 AK225162 NM_022895 AK307971	-79614	-	TSC_hg19_v1_chr12_-_121454230 BC014661	-79664	-	NM_002562 TSC_hg19_v1_chr12_+_121570744 AK294126 AK290405 AK296432 BC011913 BC121157 BC121158 AB209709 BC007679 AK090866 AK225163 AX746656 Y09561 GQ180122 DQ893457 DQ896337 AB590390 CU680114 AY847298 AY847299 AY847300 AY847301 AY847302 AY847303 AY847304 DQ399293	36793	+	U83993 NM_002560	113753	+	TSC_hg19_v1_chr12_+_121647931 AK293599 AK293660 AK297704 AK308549 AK308868 BC017458	113984	+	HQ258301|OASL|8638|2'-5'-oligoadenylate synthetase-like##AJ225089|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK314419|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_003733|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_198213|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK023956|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117408|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117410|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK222630|C12orf43|64897|chromosome 12 open reading frame 43##AK299170|C12orf43|64897|chromosome 12 open reading frame 43##AK301566|C12orf43|64897|chromosome 12 open reading frame 43##AK022510|C12orf43|64897|chromosome 12 open reading frame 43##AK225162|C12orf43|64897|chromosome 12 open reading frame 43##NM_022895|C12orf43|64897|chromosome 12 open reading frame 43##AK307971|C12orf43|64897|chromosome 12 open reading frame 43##BC014661|C12orf43|64897|chromosome 12 open reading frame 43##NM_002562|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK294126|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK290405|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK296432|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC011913|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121157|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121158|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AB209709|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC007679|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK090866|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK225163|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##Y09561|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##GQ180122|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ893457|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ896337|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847298|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847299|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847300|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847301|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847302|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847303|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847304|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ399293|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##U83993|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##NM_002560|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293599|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293660|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK297704|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308549|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308868|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC017458|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4	0.975032	CTCF.p2:21:0.975
chr17	67231713	67231844	reg1002084.p2	14.672	+	BC125231 BC125232 AY028898 NM_080284 TSC_hg19_v1_chr17_-_67138037 BC070125 AK308431 BC029852	-93703	-	BC062472 AK057068 AY028899 NM_080283	-174688	-	BC130280 BC143971 BC143972 AK304286 BC010392 AB020629 BC047765 BC094689 AK304360 AK295876 BC037309 BC024003 NM_007168	-280322	-	AY028900 NM_080282 AY247065	9192	-	AK096664 NM_018672	79995	-	TSC_hg19_v1_chr17_-_67323275 BC029426 AJ512612 AJ275973 AK292592 NM_172232	91511	-	BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##AK096664|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_018672|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##BC029426|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ512612|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ275973|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AK292592|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_172232|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5	0.999903	CTCF.p2:15:1.000
chr6	36734057	36734187	reg1002662.p1	14.672	+	AK125083 TSC_hg19_v1_chr6_+_36665627	-68494	+	TSC_hg19_v1_chr6_+_36646490 BC013967 AB209881 BC001935 BC000312 L25610 L26165 U03106 S67388 BC000275 L47232 L47233 AY008263	-87597	+	NM_000389 TSC_hg19_v1_chr6_+_36646486 AK309512 NM_001220778 U09579	-87651	+	TSC_hg19_v1_chr6_-_36807217 NM_020939	73096	-	TSC_hg19_v1_chr6_-_36807775 AB046819	73670	-	DQ892513 DQ895727 AB528504 TSC_hg19_v1_chr6_-_36842573 AK026636	108455	-	AK125083|RAB44|401258|RAB44, member RAS oncogene family##BC013967|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AB209881|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC001935|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000312|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L25610|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L26165|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U03106|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##S67388|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000275|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47232|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47233|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_000389|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK309512|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_001220778|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U09579|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_020939|CPNE5|57699|copine V##AB046819|CPNE5|57699|copine V##DQ892513|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##DQ895727|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##AK026636|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1	0.202652	CTCF.p2:-16:0.203
chr9	131936407	131936539	reg1002229.p2	14.672	+	AK310328 TSC_hg19_v1_chr9_+_131902359	-34163	+	TSC_hg19_v1_chr9_+_131901694 AK293296	-34754	+	TSC_hg19_v1_chr9_+_131873871 AK297202 AB464103 BT020119 CU678032 DQ892154 DQ894879 DQ895349 AK307424 NM_001193397	-62614	+	TSC_hg19_v1_chr9_-_131940534 BC064028	4034	-	TSC_hg19_v1_chr9_-_131940541 NM_203434	4067	-	AK092588 AX747616 NM_001012715 BC132699 BC132701	146822	+	AK310328|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK297202|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##BT020119|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ892154|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ894879|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ895349|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK307424|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##NM_001193397|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##BC064028|IER5L|389792|immediate early response 5-like##NM_203434|IER5L|389792|immediate early response 5-like##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106	0.0	
chr11	74959829	74959939	reg1002100.p1	14.669	+	NM_001195528	-7935	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	-89043	+	NM_001145212 NM_007256 FM209050 TSC_hg19_v1_chr11_+_74862151 AK304783 AK302492 AK290234 AK300134 AB020687 BC127254 BC041095 AB026256 AL117465	-97740	+	AF084040 AF084940 FJ348262 CU678548 AB462955 TSC_hg19_v1_chr11_-_75062708 AK289718 BC003636 NM_004041 NM_020251	102932	-	TSC_hg19_v1_chr11_+_75110562 D28344 AK130960 BC034149 NM_001005 AK129794 AK313051 BC013231 BC100284 X55715 BC071917 AK223048 BC003137 BC071669 S42658 AB464166 CU678394 DQ892888 DQ896136 U14990 U14991 U14992 BC003577 BC013196 AB062288	150691	+	HQ258227 BC132708 BC132710 TSC_hg19_v1_chr11_-_75141083 AK091109 AX746783	181176	-	NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145212|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_007256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209050|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK304783|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK302492|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK290234|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK300134|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB020687|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC127254|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC041095|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB026256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AL117465|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF084040|ARRB1|408|arrestin, beta 1##AF084940|ARRB1|408|arrestin, beta 1##FJ348262|ARRB1|408|arrestin, beta 1##AK289718|ARRB1|408|arrestin, beta 1##BC003636|ARRB1|408|arrestin, beta 1##NM_004041|ARRB1|408|arrestin, beta 1##NM_020251|ARRB1|408|arrestin, beta 1##D28344|RPS3|6188|ribosomal protein S3##AK130960|RPS3|6188|ribosomal protein S3##BC034149|RPS3|6188|ribosomal protein S3##NM_001005|RPS3|6188|ribosomal protein S3##AK129794|RPS3|6188|ribosomal protein S3##AK313051|RPS3|6188|ribosomal protein S3##BC013231|RPS3|6188|ribosomal protein S3##BC100284|RPS3|6188|ribosomal protein S3##X55715|RPS3|6188|ribosomal protein S3##BC071917|RPS3|6188|ribosomal protein S3##AK223048|RPS3|6188|ribosomal protein S3##BC003137|RPS3|6188|ribosomal protein S3##BC071669|RPS3|6188|ribosomal protein S3##S42658|RPS3|6188|ribosomal protein S3##DQ892888|RPS3|6188|ribosomal protein S3##DQ896136|RPS3|6188|ribosomal protein S3##U14990|RPS3|6188|ribosomal protein S3##U14991|RPS3|6188|ribosomal protein S3##U14992|RPS3|6188|ribosomal protein S3##BC003577|RPS3|6188|ribosomal protein S3##BC013196|RPS3|6188|ribosomal protein S3##AB062288|RPS3|6188|ribosomal protein S3##HQ258227|KLHL35|283212|kelch-like 35 (Drosophila)##BC132708|KLHL35|283212|kelch-like 35 (Drosophila)##BC132710|KLHL35|283212|kelch-like 35 (Drosophila)##AK091109|KLHL35|283212|kelch-like 35 (Drosophila)	0.500959	CTCF.p2:-35:0.459
chr3	101944353	101944497	reg1003618.p1	14.668	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-376051	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-397465	+	AK289689 NM_001134456	-446140	+	AY090780 NM_175056 BC143817	209442	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	3141155	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	3141397	+	AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule	0.29297	CTCF.p2:18:0.293
chr8	9226627	9226748	reg1003073.p1	14.668	+	TSC_hg19_v1_chr8_-_9009055 AK096119 NM_001201329	-217587	-	TSC_hg19_v1_chr8_-_9008167 BC043388 AK024067 NM_024607	-218509	-	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	-366182	+	TSC_hg19_v1_chr8_+_9413421 BC098394	186718	+	TSC_hg19_v1_chr8_+_9413423 AK302031	186736	+	TSC_hg19_v1_chr8_+_9413439 BC023578 AF082556 NM_003747 AK301798	186794	+	AK096119|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_001201329|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##BC043388|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK024067|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_024607|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1##BC098394|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK302031|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##BC023578|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AF082556|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##NM_003747|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK301798|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	0.72278	CTCF.p2:-7:0.723
chr1	40119316	40119431	reg1002254.p1	14.667	+	TSC_hg19_v1_chr1_-_40105343 NM_014571	-14028	-	AF311885 EU446871 TSC_hg19_v1_chr1_-_40105307 AB463718 AJ272215 BC006087	-14057	-	TSC_hg19_v1_chr1_-_40098640 AK300463	-20718	-	AF331801 AY028778 BC103879 BC103880 NM_032526	18336	-	TSC_hg19_v1_chr1_-_40157103 BC030827 AL136591 NM_016257 AK294412 AK312314 AK294813	37729	-	NM_001195007 NM_006112 NM_203456 TSC_hg19_v1_chr1_+_40204553 AK313666 BC008451 AL833576 AF104012 AF104013 AK094660 AK304694 BC107736	85165	+	NM_014571|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AF311885|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##EU446871|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AJ272215|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##BC006087|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AK300463|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AF331801|NT5C1A|84618|5'-nucleotidase, cytosolic IA##AY028778|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC103879|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC103880|NT5C1A|84618|5'-nucleotidase, cytosolic IA##NM_032526|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC030827|HPCAL4|51440|hippocalcin like 4##AL136591|HPCAL4|51440|hippocalcin like 4##NM_016257|HPCAL4|51440|hippocalcin like 4##AK294412|HPCAL4|51440|hippocalcin like 4##AK312314|HPCAL4|51440|hippocalcin like 4##AK294813|HPCAL4|51440|hippocalcin like 4##NM_001195007|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_006112|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_203456|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK313666|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC008451|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AL833576|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104012|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104013|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK094660|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK304694|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC107736|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)	0.999455	CTCF.p2:10:0.999
chr7	44280692	44280824	reg1003463.p1	14.666	+	TSC_hg19_v1_chr7_+_44240639 BC007319 AF091079 U95735 DQ890653 DQ893833 CU675611 AB451317 AB451447 BT007078 CR456989 CR542008	-40072	+	TSC_hg19_v1_chr7_+_44240631 AK223488	-40138	+	TSC_hg19_v1_chr7_+_44240576 NM_006555 AK312622	-40180	+	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	84533	-	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	249523	-	AY437865 AY515256 FJ481111 TSC_hg19_v1_chr7_-_44580901 BC117178 BC143731 BC143756 AF192522 AF192523 NM_001101648 NM_013389	300127	-	BC007319|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AF091079|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##U95735|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ890653|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ893833|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451317|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451447|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BT007078|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR456989|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR542008|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK223488|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##NM_006555|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK312622|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3##AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	0.998912	CTCF.p2:-6:0.999
chr20	4588024	4588140	reg1002881.p1	14.665	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	-358492	-	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	-458559	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	-458647	+	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	78894	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	114452	+	AY154472 NM_170774	207686	-	L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	0.992952	CTCF.p2:-12:0.993
chr4	2765949	2766095	reg1003509.p1	14.665	+	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	-7959	-	AK026176 NM_001161527	-8272	-	AB000459 AB000460 AB000461 NM_003704 BC136646 BC144337 BC144339 BC144340	-138849	+	TSC_hg19_v1_chr4_+_2794755 AK225497 NM_001122681 BC022996	28713	+	AK312286 TSC_hg19_v1_chr4_+_2794811 AK307106	28800	+	NM_001145855 TSC_hg19_v1_chr4_+_2813962	47932	+	AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2##AK026176|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001161527|TNIP2|79155|TNFAIP3 interacting protein 2##AB000459|FAM193A|8603|family with sequence similarity 193, member A##AB000460|FAM193A|8603|family with sequence similarity 193, member A##AB000461|FAM193A|8603|family with sequence similarity 193, member A##NM_003704|FAM193A|8603|family with sequence similarity 193, member A##BC136646|FAM193A|8603|family with sequence similarity 193, member A##BC144337|FAM193A|8603|family with sequence similarity 193, member A##BC144339|FAM193A|8603|family with sequence similarity 193, member A##BC144340|FAM193A|8603|family with sequence similarity 193, member A##AK225497|SH3BP2|6452|SH3-domain binding protein 2##NM_001122681|SH3BP2|6452|SH3-domain binding protein 2##BC022996|SH3BP2|6452|SH3-domain binding protein 2##AK312286|SH3BP2|6452|SH3-domain binding protein 2##AK307106|SH3BP2|6452|SH3-domain binding protein 2##NM_001145855|SH3BP2|6452|SH3-domain binding protein 2	0.684392	CTCF.p2:-12:0.684
chr1	17278286	17278417	reg1003510.p1	14.663	+	TSC_hg19_v1_chr1_+_17248425 NM_014675	-29917	+	AK123337 TSC_hg19_v1_chr1_-_16971178	-307174	-	TSC_hg19_v1_chr1_-_16971175 AK090414	-307185	-	TSC_hg19_v1_chr1_-_17307116 BC028033 AK222751 BC015039 NM_001135248 NM_002403	28798	-	AK301655 NM_001135247 NM_017459	29725	-	AL354615 AY461712 TSC_hg19_v1_chr1_-_17338424 BC030267 AK290210 NM_001141973 NM_001141974 NM_022089	60032	-	NM_014675|CROCC|9696|ciliary rootlet coiled-coil, rootletin##AK123337|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##BC028033|MFAP2|4237|microfibrillar-associated protein 2##AK222751|MFAP2|4237|microfibrillar-associated protein 2##BC015039|MFAP2|4237|microfibrillar-associated protein 2##NM_001135248|MFAP2|4237|microfibrillar-associated protein 2##NM_002403|MFAP2|4237|microfibrillar-associated protein 2##AK301655|MFAP2|4237|microfibrillar-associated protein 2##NM_001135247|MFAP2|4237|microfibrillar-associated protein 2##NM_017459|MFAP2|4237|microfibrillar-associated protein 2##AL354615|ATP13A2|23400|ATPase type 13A2##AY461712|ATP13A2|23400|ATPase type 13A2##BC030267|ATP13A2|23400|ATPase type 13A2##AK290210|ATP13A2|23400|ATPase type 13A2##NM_001141973|ATP13A2|23400|ATPase type 13A2##NM_001141974|ATP13A2|23400|ATPase type 13A2##NM_022089|ATP13A2|23400|ATPase type 13A2	0.986567	CTCF.p2:10:0.987
chr1	21521794	21521905	reg1002065.p2	14.662	+	TSC_hg19_v1_chr1_-_21503387 NM_001198801 NM_001198802	-18479	-	TSC_hg19_v1_chr1_-_21503344 BC072413 AB209119	-18525	-	BC030578 NM_001198803	-20610	-	D43698 TSC_hg19_v1_chr1_-_21606025 BX648351 NM_001113347	84234	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	94859	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	95085	-	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##D43698|ECE1|1889|endothelin converting enzyme 1##BX648351|ECE1|1889|endothelin converting enzyme 1##NM_001113347|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1	1.013046	CTCF.p2:0:1.000
chr18	741987	742102	reg1002373.p1	14.662	+	TSC_hg19_v1_chr18_-_712601 NM_202758 X67098 X89602 AK127818 BX648215 AK295850 AK292780 AK309035 BC001285 NM_001126123 NM_017512	-29462	-	AB464497 AK289986 BC028301 NM_001012716	-83752	-	BC002567 TSC_hg19_v1_chr18_+_657708 BC018858 AK292620 AB590362 DQ892149 AB077207 AB077208 BT006811	-84333	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	70259	-	AK313050 NM_001099733	162899	+	NM_001117 BC093837 BC101803 S83513	163297	+	NM_202758|ENOSF1|55556|enolase superfamily member 1##X67098|ENOSF1|55556|enolase superfamily member 1##X89602|ENOSF1|55556|enolase superfamily member 1##AK127818|ENOSF1|55556|enolase superfamily member 1##BX648215|ENOSF1|55556|enolase superfamily member 1##AK295850|ENOSF1|55556|enolase superfamily member 1##AK292780|ENOSF1|55556|enolase superfamily member 1##AK309035|ENOSF1|55556|enolase superfamily member 1##BC001285|ENOSF1|55556|enolase superfamily member 1##NM_001126123|ENOSF1|55556|enolase superfamily member 1##NM_017512|ENOSF1|55556|enolase superfamily member 1##AK289986|C18orf56|494514|chromosome 18 open reading frame 56##BC028301|C18orf56|494514|chromosome 18 open reading frame 56##NM_001012716|C18orf56|494514|chromosome 18 open reading frame 56##BC002567|TYMS|7298|thymidylate synthetase##BC018858|TYMS|7298|thymidylate synthetase##AK292620|TYMS|7298|thymidylate synthetase##DQ892149|TYMS|7298|thymidylate synthetase##AB077207|TYMS|7298|thymidylate synthetase##AB077208|TYMS|7298|thymidylate synthetase##BT006811|TYMS|7298|thymidylate synthetase##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)	0.99449	CTCF.p2:-12:0.994
chr3	16288926	16289053	reg1003436.p1	14.662	+	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-72795	+	AB002377 NM_015199 TSC_hg19_v1_chr3_-_15901096	-387977	-	TSC_hg19_v1_chr3_-_15839678 AK293770 NM_001195098	-449307	-	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	17400	-	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	17719	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	266029	-	AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AB002377|ANKRD28|23243|ankyrin repeat domain 28##NM_015199|ANKRD28|23243|ankyrin repeat domain 28##AK293770|ANKRD28|23243|ankyrin repeat domain 28##NM_001195098|ANKRD28|23243|ankyrin repeat domain 28##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1	0.998988	CTCF.p2:5:0.999
chr2	111152483	111152603	reg1003657.p1	14.660	+	TSC_hg19_v1_chr2_-_110970123 BC031315	-182422	-	AJ001815 BC032939 TSC_hg19_v1_chr2_-_110962582 BX571745 NM_000272 NM_001128178 NM_001128179 NM_207181	-189936	-	AF023674 CU679489 BC062574 TSC_hg19_v1_chr2_-_110962561 BC009789 AK299011 AK225600 AK307654	-189988	-	BC094740 NM_001205288 NM_033514	78108	-	NM_005054 U64675	182134	-	AL136868 NM_001037866 NM_001123363 NM_032260	183765	-	BC031315|LINC00116|205251|long intergenic non-protein coding RNA 116##AJ001815|NPHP1|4867|nephronophthisis 1 (juvenile)##BC032939|NPHP1|4867|nephronophthisis 1 (juvenile)##BX571745|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_000272|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128178|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128179|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_207181|NPHP1|4867|nephronophthisis 1 (juvenile)##AF023674|NPHP1|4867|nephronophthisis 1 (juvenile)##BC062574|NPHP1|4867|nephronophthisis 1 (juvenile)##BC009789|NPHP1|4867|nephronophthisis 1 (juvenile)##AK299011|NPHP1|4867|nephronophthisis 1 (juvenile)##AK225600|NPHP1|4867|nephronophthisis 1 (juvenile)##AK307654|NPHP1|4867|nephronophthisis 1 (juvenile)##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5	0.359056	CTCF.p2:-6:0.359
chr13	50550929	50551062	reg1003180.p1	14.659	+	TSC_hg19_v1_chr13_-_50510444 AF052154 AF055016 BC022519 AK316576 BC007076 AK308818 AF334405 AK290576 NM_001127482 NM_020456	-40478	-	TSC_hg19_v1_chr13_-_50367200 BC035090 NM_002267	-183872	-	TSC_hg19_v1_chr13_-_50366705 AK290528	-184260	-	TSC_hg19_v1_chr13_+_50571212 NM_001007278 NM_005798 NM_052811 NM_213590 AY455758 AY764035 AK314496 AF241850 BC029514 AY191002 BC003579 BC063407 AF220127 AL360196	20185	+	AY169387 AY169388 NM_173605 NM_199464 AK313401 AY129654 AY129653 BC020887 BC032343 AY190921 AY190922 AL832695 CU689344 DQ891601 DQ894796	38514	+	TSC_hg19_v1_chr13_-_50656128 BC038090 AF264787 Y15228 BC022349 BC006995 BC026275 BC030971 BC070292 BC055417 BC017819 BC022282	105154	-	AF052154|SPRYD7|57213|SPRY domain containing 7##AF055016|SPRYD7|57213|SPRY domain containing 7##BC022519|SPRYD7|57213|SPRY domain containing 7##AK316576|SPRYD7|57213|SPRY domain containing 7##BC007076|SPRYD7|57213|SPRY domain containing 7##AK308818|SPRYD7|57213|SPRY domain containing 7##AF334405|SPRYD7|57213|SPRY domain containing 7##AK290576|SPRYD7|57213|SPRY domain containing 7##NM_001127482|SPRYD7|57213|SPRY domain containing 7##NM_020456|SPRYD7|57213|SPRY domain containing 7##BC035090|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##NM_002267|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK290528|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##NM_001007278|TRIM13|10206|tripartite motif containing 13##NM_005798|TRIM13|10206|tripartite motif containing 13##NM_052811|TRIM13|10206|tripartite motif containing 13##NM_213590|TRIM13|10206|tripartite motif containing 13##AY455758|TRIM13|10206|tripartite motif containing 13##AY764035|TRIM13|10206|tripartite motif containing 13##AK314496|TRIM13|10206|tripartite motif containing 13##AF241850|TRIM13|10206|tripartite motif containing 13##BC029514|TRIM13|10206|tripartite motif containing 13##AY191002|TRIM13|10206|tripartite motif containing 13##BC003579|TRIM13|10206|tripartite motif containing 13##BC063407|TRIM13|10206|tripartite motif containing 13##AF220127|TRIM13|10206|tripartite motif containing 13##AL360196|TRIM13|10206|tripartite motif containing 13##AY169387|KCNRG|283518|potassium channel regulator##AY169388|KCNRG|283518|potassium channel regulator##NM_173605|KCNRG|283518|potassium channel regulator##NM_199464|KCNRG|283518|potassium channel regulator##AK313401|KCNRG|283518|potassium channel regulator##AY129654|KCNRG|283518|potassium channel regulator##AY129653|KCNRG|283518|potassium channel regulator##BC020887|KCNRG|283518|potassium channel regulator##BC032343|KCNRG|283518|potassium channel regulator##AY190921|KCNRG|283518|potassium channel regulator##AY190922|KCNRG|283518|potassium channel regulator##AL832695|TRIM13|10206|tripartite motif containing 13##DQ891601|KCNRG|283518|potassium channel regulator##DQ894796|KCNRG|283518|potassium channel regulator##BC038090|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AF264787|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##Y15228|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##BC070292|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##BC055417|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)	0.998646	CTCF.p2:-16:0.999
chr15	101413400	101413527	reg1003631.p1	14.656	+	TSC_hg19_v1_chr15_+_101390032 AK056534	-23430	+	NM_024708 NM_198243 TSC_hg19_v1_chr15_+_101142810 AK289860 BC063581 AF451994 AK026204 AK222958 AK222974 BC025252	-270668	+	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	-271054	-	TSC_hg19_v1_chr15_+_101420006 NM_000693	6543	+	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	6608	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	46011	-	AK056534|LOC145757|145757|uncharacterized LOC145757##NM_024708|ASB7|140460|ankyrin repeat and SOCS box containing 7##NM_198243|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK289860|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC063581|ASB7|140460|ankyrin repeat and SOCS box containing 7##AF451994|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK026204|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222958|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222974|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC025252|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)##NM_000693|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3	0.974245	CTCF.p2:5:0.974
chr18	77288875	77289004	reg1003168.p1	14.655	+	BC045628 TSC_hg19_v1_chr18_+_77253425	-35559	+	TSC_hg19_v1_chr18_+_77160328 NM_172387 NM_172389 U59736 AK293760 U80918 X99829 EU887560 EU887562 EU887564 EU887566	-128622	+	TSC_hg19_v1_chr18_+_77155967 U08015 BC104753 BC112243 BC143457 EU887559 EU887561 EU887563 EU887565	-132844	+	TSC_hg19_v1_chr18_-_77439359 AK002023	150374	-	TSC_hg19_v1_chr18_-_77439740 AK098581	150802	-	TSC_hg19_v1_chr18_+_77439801 BC047999 NM_004715 NM_048368	150862	+	BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172387|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172389|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U59736|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK293760|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80918|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887560|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887562|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887564|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887566|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U08015|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC104753|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC112243|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC143457|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887559|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887561|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887563|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887565|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK098581|FLJ25715|284241|uncharacterized protein FLJ25715##BC047999|CTDP1|9150|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1##NM_004715|CTDP1|9150|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1##NM_048368|CTDP1|9150|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	0.072177	
chr3	196336276	196336415	reg1002678.p1	14.655	+	TSC_hg19_v1_chr3_+_196295733 NM_001105573	-40613	+	AK025697 TSC_hg19_v1_chr3_+_196295533	-40838	+	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	-40955	-	TSC_hg19_v1_chr3_+_196366647 BC034704	30300	+	BC044233 NM_198565 TSC_hg19_v1_chr3_+_196366658 AY358322	30317	+	AK058155 TSC_hg19_v1_chr3_-_196439156 BC007827 AY099509 NM_032898 AK314070	102771	-	NM_001105573|FBXO45|200933|F-box protein 45##AK025697|FBXO45|200933|F-box protein 45##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53##BC034704|LRRC33|375387|leucine rich repeat containing 33##BC044233|LRRC33|375387|leucine rich repeat containing 33##NM_198565|LRRC33|375387|leucine rich repeat containing 33##AY358322|LRRC33|375387|leucine rich repeat containing 33##AK058155|CEP19|84984|centrosomal protein 19kDa##BC007827|CEP19|84984|centrosomal protein 19kDa##AY099509|CEP19|84984|centrosomal protein 19kDa##NM_032898|CEP19|84984|centrosomal protein 19kDa##AK314070|CEP19|84984|centrosomal protein 19kDa	1.010086	CTCF.p2:-15:0.999
chr7	948597	948702	reg1001909.p1	14.655	+	TSC_hg19_v1_chr7_+_916249 BC003550 AK023560 AF132954	-32379	+	TSC_hg19_v1_chr7_+_916188 NM_015949	-32446	+	BC142707 NM_001130965 AB463335 CU680640	-76501	+	AK300644 AK300859 TSC_hg19_v1_chr7_-_960513	11865	-	TSC_hg19_v1_chr7_-_994129 AB587419 BC033747	45466	-	TSC_hg19_v1_chr7_-_994317 NM_006869	45664	-	BC003550|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK023560|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AF132954|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##NM_015949|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##BC142707|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001130965|SUN1|23353|Sad1 and UNC84 domain containing 1##AK300644|ADAP1|11033|ArfGAP with dual PH domains 1##AK300859|ADAP1|11033|ArfGAP with dual PH domains 1##BC033747|ADAP1|11033|ArfGAP with dual PH domains 1##NM_006869|ADAP1|11033|ArfGAP with dual PH domains 1	0.755895	CTCF.p2:-4:0.756
chr2	101769394	101769513	reg1002354.p2	14.654	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	-1670	-	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	-150731	+	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	-332687	+	TSC_hg19_v1_chr2_+_101869347 NM_017546	99884	+	TSC_hg19_v1_chr2_+_101869378 AF103798 BC064421 BC018664	99939	+	AM392566 AB463234 TSC_hg19_v1_chr2_-_101925153 BC019355 BC032328 AK074985 AK075141 AY450390 BC045743 AK129799 NM_173647	155689	-	AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_017546|C2orf29|55571|chromosome 2 open reading frame 29##AF103798|C2orf29|55571|chromosome 2 open reading frame 29##BC064421|C2orf29|55571|chromosome 2 open reading frame 29##BC018664|C2orf29|55571|chromosome 2 open reading frame 29##AM392566|RNF149|284996|ring finger protein 149##BC019355|RNF149|284996|ring finger protein 149##BC032328|RNF149|284996|ring finger protein 149##AK074985|RNF149|284996|ring finger protein 149##AK075141|RNF149|284996|ring finger protein 149##AY450390|RNF149|284996|ring finger protein 149##BC045743|RNF149|284996|ring finger protein 149##AK129799|RNF149|284996|ring finger protein 149##NM_173647|RNF149|284996|ring finger protein 149	0.553209	CTCF.p2:11:0.553
chr7	137583975	137584094	reg1001996.p1	14.654	+	TSC_hg19_v1_chr7_+_137531690 BC047556	-52302	+	TSC_hg19_v1_chr7_-_137531587 NM_004717	-52438	-	BC005916 TSC_hg19_v1_chr7_-_137028543 NM_002825 M57399	-555479	-	TSC_hg19_v1_chr7_-_137620668 BC015585	36628	-	NM_001243523	54059	+	AK293048 BC110813 TSC_hg19_v1_chr7_-_137686800 BC063666 AJ549092 AJ549387	102760	-	NM_004717|DGKI|9162|diacylglycerol kinase, iota##BC005916|PTN|5764|pleiotrophin##NM_002825|PTN|5764|pleiotrophin##M57399|PTN|5764|pleiotrophin##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_001243523|LOC100130880|100130880|uncharacterized LOC100130880##AK293048|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC110813|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC063666|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549092|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549387|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.967938	CTCF.p2:8:0.968
chr10	72639905	72640023	reg1003011.p1	14.653	+	TSC_hg19_v1_chr10_+_72575751 AB033078 AJ011304	-64209	+	TSC_hg19_v1_chr10_+_72575685 NM_003901 BC052991 BC051238 BC068061	-64295	+	BC060774 BC139728 BC137543 BC137544 BC144692 BC144694 BC144695 AK057382 NM_152710	-94831	-	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	8338	-	NM_000281	8576	-	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	332416	+	AB033078|SGPL1|8879|sphingosine-1-phosphate lyase 1##AJ011304|SGPL1|8879|sphingosine-1-phosphate lyase 1##NM_003901|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC052991|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC051238|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC068061|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC060774|C10orf27|219793|chromosome 10 open reading frame 27##BC139728|C10orf27|219793|chromosome 10 open reading frame 27##BC137543|C10orf27|219793|chromosome 10 open reading frame 27##BC137544|C10orf27|219793|chromosome 10 open reading frame 27##BC144692|C10orf27|219793|chromosome 10 open reading frame 27##BC144694|C10orf27|219793|chromosome 10 open reading frame 27##BC144695|C10orf27|219793|chromosome 10 open reading frame 27##AK057382|C10orf27|219793|chromosome 10 open reading frame 27##NM_152710|C10orf27|219793|chromosome 10 open reading frame 27##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##NM_000281|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)	0.998463	CTCF.p2:5:0.998
chr5	150494975	150495108	reg1002571.p1	14.653	+	AK290999 NM_001252390	-27821	-	BC014008 AB252970 AB252971 AB252974 AB252982 AJ011895 AJ011896 AK298685 NM_001252391 NM_001252392	-28320	-	TSC_hg19_v1_chr5_-_150460599 AB252972 AB252973 AB252975 NM_001252385 NM_001252386 NM_001252393 NM_006058 AY012155	-34418	-	AK303078 NM_001193544	26166	-	J03578 BC017046 TSC_hg19_v1_chr5_-_150537299	42240	-	TSC_hg19_v1_chr5_-_150537327 AK126836 AK290672 AK130077 Y00097 AK298582	42278	-	AK290999|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252390|TNIP1|10318|TNFAIP3 interacting protein 1##BC014008|TNIP1|10318|TNFAIP3 interacting protein 1##AB252970|TNIP1|10318|TNFAIP3 interacting protein 1##AB252971|TNIP1|10318|TNFAIP3 interacting protein 1##AB252982|TNIP1|10318|TNFAIP3 interacting protein 1##AJ011895|TNIP1|10318|TNFAIP3 interacting protein 1##AJ011896|TNIP1|10318|TNFAIP3 interacting protein 1##AK298685|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252391|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252392|TNIP1|10318|TNFAIP3 interacting protein 1##AB252972|TNIP1|10318|TNFAIP3 interacting protein 1##AB252973|TNIP1|10318|TNFAIP3 interacting protein 1##AB252975|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252385|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252386|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252393|TNIP1|10318|TNFAIP3 interacting protein 1##NM_006058|TNIP1|10318|TNFAIP3 interacting protein 1##AY012155|TNIP1|10318|TNFAIP3 interacting protein 1##AK303078|ANXA6|309|annexin A6##NM_001193544|ANXA6|309|annexin A6##J03578|ANXA6|309|annexin A6##BC017046|ANXA6|309|annexin A6##AK126836|ANXA6|309|annexin A6##AK290672|ANXA6|309|annexin A6##AK130077|ANXA6|309|annexin A6##Y00097|ANXA6|309|annexin A6##AK298582|ANXA6|309|annexin A6	0.884956	CTCF.p2:12:0.885
chr14	69283495	69283640	reg1002560.p4	14.651	+	NM_001244701 AB528867	-20583	-	NM_001244698 NM_004926	-22937	-	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	-23847	-	TSC_hg19_v1_chr14_-_69354901 BX641076	71372	-	BX248020 AK299362 TSC_hg19_v1_chr14_-_69444987	161419	-	BT007207 AB590251 DQ890778 DQ895768 EU716325 FJ410030 TSC_hg19_v1_chr14_-_69445830 M95178 BC015766	162263	-	NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BX641076|ACTN1|87|actinin, alpha 1##BX248020|ACTN1|87|actinin, alpha 1##AK299362|ACTN1|87|actinin, alpha 1##BT007207|ACTN1|87|actinin, alpha 1##DQ890778|ACTN1|87|actinin, alpha 1##DQ895768|ACTN1|87|actinin, alpha 1##EU716325|ACTN1|87|actinin, alpha 1##FJ410030|ACTN1|87|actinin, alpha 1##M95178|ACTN1|87|actinin, alpha 1##BC015766|ACTN1|87|actinin, alpha 1	0.992383	CTCF.p2:12:0.992
chr1	108072282	108072411	reg1002889.p1	14.650	+	AB023193 TSC_hg19_v1_chr1_+_107683657	-388742	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-389604	+	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	-472981	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	158778	-	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	435254	-	AJ619961 NM_213651 AK292567	663050	-	AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.878744	CTCF.p2:14:0.879
chr1	160398518	160398646	reg1002829.p1	14.650	+	NM_020335 TSC_hg19_v1_chr1_+_160370394	-28203	+	M96739 AK313700 NM_005598 BC013789	-61718	+	NM_001098398 NM_004371 U24105	-85179	-	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	94447	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	150665	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	150706	-	NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##NM_001098398|COPA|1314|coatomer protein complex, subunit alpha##NM_004371|COPA|1314|coatomer protein complex, subunit alpha##U24105|COPA|1314|coatomer protein complex, subunit alpha##AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule	0.656183	CTCF.p2:-21:0.656
chr2	48338417	48338559	reg1002453.p1	14.650	+	BC130445 BC136480 AK292877 AF176706 AF174599 AK223592 BC043258 AY827075 TSC_hg19_v1_chr2_-_48132864 AK297444 NM_001190274	-205695	-	AK304140 AK315108 NM_025133	-222637	-	BC071594 NM_000179 TSC_hg19_v1_chr2_+_48010283 U28946 D89646 BC104665 U54777 BC004246 AK293921 AK308392 AB590153 DQ892898	-328192	+	TSC_hg19_v1_chr2_+_48541851 NM_002158 BC063305	203330	+	AY134855 NM_001135629 NM_001193475 NM_152994 TSC_hg19_v1_chr2_+_48667936 AK172762 AK122900 AY092062 BC111059 AK307755 BC117279 BC143466 BC143463 BC040721	329484	+	AK309740 NM_001198593 TSC_hg19_v1_chr2_+_48757177	418633	+	BC130445|FBXO11|80204|F-box protein 11##BC136480|FBXO11|80204|F-box protein 11##AK292877|FBXO11|80204|F-box protein 11##AF176706|FBXO11|80204|F-box protein 11##AF174599|FBXO11|80204|F-box protein 11##AK223592|FBXO11|80204|F-box protein 11##BC043258|FBXO11|80204|F-box protein 11##AY827075|FBXO11|80204|F-box protein 11##AK297444|FBXO11|80204|F-box protein 11##NM_001190274|FBXO11|80204|F-box protein 11##AK304140|FBXO11|80204|F-box protein 11##AK315108|FBXO11|80204|F-box protein 11##NM_025133|FBXO11|80204|F-box protein 11##BC071594|MSH6|2956|mutS homolog 6 (E. coli)##NM_000179|MSH6|2956|mutS homolog 6 (E. coli)##U28946|MSH6|2956|mutS homolog 6 (E. coli)##D89646|MSH6|2956|mutS homolog 6 (E. coli)##BC104665|MSH6|2956|mutS homolog 6 (E. coli)##U54777|MSH6|2956|mutS homolog 6 (E. coli)##BC004246|MSH6|2956|mutS homolog 6 (E. coli)##AK293921|MSH6|2956|mutS homolog 6 (E. coli)##AK308392|MSH6|2956|mutS homolog 6 (E. coli)##DQ892898|MSH6|2956|mutS homolog 6 (E. coli)##NM_002158|FOXN2|3344|forkhead box N2##BC063305|FOXN2|3344|forkhead box N2##AY134855|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_001135629|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_001193475|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_152994|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK172762|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK122900|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AY092062|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC111059|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK307755|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC117279|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC143466|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC143463|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC040721|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	0.993332	CTCF.p2:-10:0.993
chr3	160659799	160659938	reg1003975.p1	14.650	+	AY337264 NM_139245	-185873	+	TSC_hg19_v1_chr3_+_160473386 BC110801	-186528	+	AK026248 NM_025047 BC034354	-264913	+	AB050856 NM_033169 TSC_hg19_v1_chr3_-_160823138 AY359049 BC047618 AK223439 BC028571 AF154848 AK022491 AK095917 NM_001038628 NM_003781 NM_033167 NM_033168	163069	-	AK225664 TSC_hg19_v1_chr3_+_160939097	279228	+	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	279253	+	AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##BC110801|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AK026248|ARL14|80117|ADP-ribosylation factor-like 14##NM_025047|ARL14|80117|ADP-ribosylation factor-like 14##BC034354|ARL14|80117|ADP-ribosylation factor-like 14##AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK225664|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)	0.998922	CTCF.p2:11:0.999
chr8	62722654	62722780	reg1003083.p1	14.650	+	TSC_hg19_v1_chr8_-_62627167 NM_001164754 NM_001164755 NM_001164756 NM_004318 NM_032466	-95528	-	TSC_hg19_v1_chr8_-_62627152 BC015518 BC025236 AK298577	-95579	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	-95699	-	TSC_hg19_v1_chr8_+_63161185 AK299689	438489	+	TSC_hg19_v1_chr8_+_63161499 AK096949 NM_173688 AX721226 AB463913	438847	+	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	1228681	-	NM_001164754|ASPH|444|aspartate beta-hydroxylase##NM_001164755|ASPH|444|aspartate beta-hydroxylase##NM_001164756|ASPH|444|aspartate beta-hydroxylase##NM_004318|ASPH|444|aspartate beta-hydroxylase##NM_032466|ASPH|444|aspartate beta-hydroxylase##BC015518|ASPH|444|aspartate beta-hydroxylase##BC025236|ASPH|444|aspartate beta-hydroxylase##AK298577|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase##AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)	0.942742	CTCF.p2:5:0.943
chr7	99591925	99592037	reg1002981.p1	14.649	+	D90427 M76707 BC014470 AB463407 CU689768 X59766 BC005306 TSC_hg19_v1_chr7_-_99573655 BC005908 BC033830 NM_001185	-18296	-	AB528858 AF503615 AY297109 NM_181538	-64739	-	TSC_hg19_v1_chr7_-_99517154 AF220023 AF220024 AK092892 AX747794 NM_033017 NM_033091	-74786	-	TSC_hg19_v1_chr7_+_99613225 AL833578 NM_003439 AF454940 AK054676 AY260738 BC022378 BX640646 AK091471 AX747005 AK074116	21244	+	BC112224 BC113697 CU692588 EU446909 HQ258578 TSC_hg19_v1_chr7_+_99621246	29184	+	TSC_hg19_v1_chr7_+_99627917 U09848	35957	+	D90427|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##M76707|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC014470|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##X59766|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC005306|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC005908|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC033830|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##NM_001185|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##AF503615|GJC3|349149|gap junction protein, gamma 3, 30.2kDa##AY297109|GJC3|349149|gap junction protein, gamma 3, 30.2kDa##NM_181538|GJC3|349149|gap junction protein, gamma 3, 30.2kDa##AF220023|TRIM4|89122|tripartite motif containing 4##AF220024|TRIM4|89122|tripartite motif containing 4##AK092892|TRIM4|89122|tripartite motif containing 4##NM_033017|TRIM4|89122|tripartite motif containing 4##NM_033091|TRIM4|89122|tripartite motif containing 4##AL833578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##NM_003439|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AF454940|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK054676|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AY260738|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC022378|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BX640646|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK091471|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK074116|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC112224|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC113697|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##EU446909|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##HQ258578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##U09848|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1	0.921517	CTCF.p2:-2:0.922
chr1	154452430	154452573	reg1003554.p1	14.648	+	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	-74427	+	AK223582 BC132684 BC132686 TSC_hg19_v1_chr1_+_154377856	-74649	+	NM_000565 NM_001206866 NM_181359 X12830 BC089410 TSC_hg19_v1_chr1_+_154377822	-74751	+	BC143765 BC117210 NM_001010846	22023	-	BC044864 NM_001098475 NM_182499	22193	+	BC107057 AY112698 TSC_hg19_v1_chr1_-_154531132 AY948200 NM_017582	78608	-	AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor##AK223582|IL6R|3570|interleukin 6 receptor##BC132684|IL6R|3570|interleukin 6 receptor##BC132686|IL6R|3570|interleukin 6 receptor##NM_000565|IL6R|3570|interleukin 6 receptor##NM_001206866|IL6R|3570|interleukin 6 receptor##NM_181359|IL6R|3570|interleukin 6 receptor##X12830|IL6R|3570|interleukin 6 receptor##BC089410|IL6R|3570|interleukin 6 receptor##BC143765|SHE|126669|Src homology 2 domain containing E##BC117210|SHE|126669|Src homology 2 domain containing E##NM_001010846|SHE|126669|Src homology 2 domain containing E##BC044864|TDRD10|126668|tudor domain containing 10##NM_001098475|TDRD10|126668|tudor domain containing 10##NM_182499|TDRD10|126668|tudor domain containing 10##BC107057|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY112698|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY948200|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##NM_017582|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1	0.843252	CTCF.p2:-14:0.843
chr6	49574945	49575083	reg1004630.p1	14.648	+	TSC_hg19_v1_chr6_+_49518472 CU691450	-56515	+	AK289889 TSC_hg19_v1_chr6_+_49518380 BC036917 AK054918	-56642	+	NM_001145652	-56902	+	AF031548 AB590393 DQ892782 DQ896030 AF031549 AF178841 AF179682 AF179684 AF179685 AF187847 BC012605 X64594 AK313505 NM_000324	29541	-	AK223337 M25532 BC022011 BC107707 X95239 AY289796 AY292863 AY773479 AK292385 AY292862 NM_001142407 NM_001142408 NM_001142417 NM_001142435 NM_003296	106257	-	BC069602 X95240 AK223380 X94323 AK303966 AK313387 AK292786 NM_001190986 NM_006061	137097	-	AK289889|C6orf141|135398|chromosome 6 open reading frame 141##BC036917|C6orf141|135398|chromosome 6 open reading frame 141##AK054918|C6orf141|135398|chromosome 6 open reading frame 141##NM_001145652|C6orf141|135398|chromosome 6 open reading frame 141##AF031548|RHAG|6005|Rh-associated glycoprotein##DQ892782|RHAG|6005|Rh-associated glycoprotein##DQ896030|RHAG|6005|Rh-associated glycoprotein##AF031549|RHAG|6005|Rh-associated glycoprotein##AF178841|RHAG|6005|Rh-associated glycoprotein##AF179682|RHAG|6005|Rh-associated glycoprotein##AF179684|RHAG|6005|Rh-associated glycoprotein##AF179685|RHAG|6005|Rh-associated glycoprotein##AF187847|RHAG|6005|Rh-associated glycoprotein##BC012605|RHAG|6005|Rh-associated glycoprotein##X64594|RHAG|6005|Rh-associated glycoprotein##AK313505|RHAG|6005|Rh-associated glycoprotein##NM_000324|RHAG|6005|Rh-associated glycoprotein##AK223337|CRISP2|7180|cysteine-rich secretory protein 2##M25532|CRISP2|7180|cysteine-rich secretory protein 2##BC022011|CRISP2|7180|cysteine-rich secretory protein 2##BC107707|CRISP2|7180|cysteine-rich secretory protein 2##X95239|CRISP2|7180|cysteine-rich secretory protein 2##AY289796|CRISP2|7180|cysteine-rich secretory protein 2##AY292863|CRISP2|7180|cysteine-rich secretory protein 2##AY773479|CRISP2|7180|cysteine-rich secretory protein 2##AK292385|CRISP2|7180|cysteine-rich secretory protein 2##AY292862|CRISP2|7180|cysteine-rich secretory protein 2##NM_001142407|CRISP2|7180|cysteine-rich secretory protein 2##NM_001142408|CRISP2|7180|cysteine-rich secretory protein 2##NM_001142417|CRISP2|7180|cysteine-rich secretory protein 2##NM_001142435|CRISP2|7180|cysteine-rich secretory protein 2##NM_003296|CRISP2|7180|cysteine-rich secretory protein 2##BC069602|CRISP3|10321|cysteine-rich secretory protein 3##X95240|CRISP3|10321|cysteine-rich secretory protein 3##AK223380|CRISP3|10321|cysteine-rich secretory protein 3##X94323|CRISP3|10321|cysteine-rich secretory protein 3##AK303966|CRISP3|10321|cysteine-rich secretory protein 3##AK313387|CRISP3|10321|cysteine-rich secretory protein 3##AK292786|CRISP3|10321|cysteine-rich secretory protein 3##NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3##NM_006061|CRISP3|10321|cysteine-rich secretory protein 3	0.990995	CTCF.p2:9:0.991
chr15	74265405	74265517	reg1002114.p1	14.646	+	TSC_hg19_v1_chr15_+_74218979 DQ893331	-46420	+	TSC_hg19_v1_chr15_+_74218813 BC015090 L21186	-46646	+	TSC_hg19_v1_chr15_+_74218802 BC068542 AK303982 AK314222	-46660	+	AL109664 AF074953 AL109665 CR542089 DQ064605 AB587381 AK300799 AK222665 AK075244 Y16522 BC034379 BC065249 NM_004809 AF111800 AK302051 TSC_hg19_v1_chr15_-_74284672 AF156557	19142	-	TSC_hg19_v1_chr15_-_74286928 AK091531	21473	-	TSC_hg19_v1_chr15_+_74287096 NM_002675 NM_033238 NM_033239 NM_033240 NM_033244 NM_033246 NM_033247 NM_033249 NM_033250 X63131 AB209411 S50913 M73778 AF230401 AF230402 AF230403 AF230404 AF230405 AF230406 AF230407 AF230408 AF230409 AF230410 AF230411 BC000080 BC020994	21589	+	DQ893331|LOXL1|4016|lysyl oxidase-like 1##BC015090|LOXL1|4016|lysyl oxidase-like 1##L21186|LOXL1|4016|lysyl oxidase-like 1##BC068542|LOXL1|4016|lysyl oxidase-like 1##AK303982|LOXL1|4016|lysyl oxidase-like 1##AK314222|LOXL1|4016|lysyl oxidase-like 1##AL109664|STOML1|9399|stomatin (EPB72)-like 1##AF074953|STOML1|9399|stomatin (EPB72)-like 1##AL109665|STOML1|9399|stomatin (EPB72)-like 1##CR542089|STOML1|9399|stomatin (EPB72)-like 1##DQ064605|STOML1|9399|stomatin (EPB72)-like 1##AK300799|STOML1|9399|stomatin (EPB72)-like 1##AK222665|STOML1|9399|stomatin (EPB72)-like 1##AK075244|STOML1|9399|stomatin (EPB72)-like 1##Y16522|STOML1|9399|stomatin (EPB72)-like 1##BC034379|STOML1|9399|stomatin (EPB72)-like 1##BC065249|STOML1|9399|stomatin (EPB72)-like 1##NM_004809|STOML1|9399|stomatin (EPB72)-like 1##AF111800|STOML1|9399|stomatin (EPB72)-like 1##AK302051|STOML1|9399|stomatin (EPB72)-like 1##AF156557|STOML1|9399|stomatin (EPB72)-like 1##AK091531|STOML1|9399|stomatin (EPB72)-like 1##NM_002675|PML|5371|promyelocytic leukemia##NM_033238|PML|5371|promyelocytic leukemia##NM_033239|PML|5371|promyelocytic leukemia##NM_033240|PML|5371|promyelocytic leukemia##NM_033244|PML|5371|promyelocytic leukemia##NM_033246|PML|5371|promyelocytic leukemia##NM_033247|PML|5371|promyelocytic leukemia##NM_033249|PML|5371|promyelocytic leukemia##NM_033250|PML|5371|promyelocytic leukemia##X63131|PML|5371|promyelocytic leukemia##AB209411|PML|5371|promyelocytic leukemia##S50913|PML|5371|promyelocytic leukemia##M73778|PML|5371|promyelocytic leukemia##AF230401|PML|5371|promyelocytic leukemia##AF230402|PML|5371|promyelocytic leukemia##AF230403|PML|5371|promyelocytic leukemia##AF230404|PML|5371|promyelocytic leukemia##AF230405|PML|5371|promyelocytic leukemia##AF230406|PML|5371|promyelocytic leukemia##AF230407|PML|5371|promyelocytic leukemia##AF230408|PML|5371|promyelocytic leukemia##AF230409|PML|5371|promyelocytic leukemia##AF230410|PML|5371|promyelocytic leukemia##AF230411|PML|5371|promyelocytic leukemia##BC000080|PML|5371|promyelocytic leukemia##BC020994|PML|5371|promyelocytic leukemia	0.999694	CTCF.p2:-6:1.000
chr8	103664159	103664278	reg1003371.p1	14.646	+	NM_024410 AK315276 BC104456 BC104457	-100357	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-239307	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-413045	-	BC011538 NM_001032282 S81439	1874	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	3714	-	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	212141	-	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1	0.981339	CTCF.p2:-2:0.981
chr20	58173833	58173957	reg1002532.p1	14.644	+	AK098788 NM_001199505	-21332	+	TSC_hg19_v1_chr20_+_57875665 J05081 X52001 AB590897 CU679163 BT007085 DQ096281	-298138	+	BC008876 TSC_hg19_v1_chr20_+_57875490 BC053866 NM_000114 NM_207032 NM_207033 NM_207034	-298406	+	BC108303 AJ311122 NM_080672 TSC_hg19_v1_chr20_+_58179660 BC117362 BC117364	5759	+	AJ617581 NM_001199506 AK316047	77821	+	AB098521 AB098522 NM_183244 NM_183246	122369	+	AK098788|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199505|PHACTR3|116154|phosphatase and actin regulator 3##J05081|EDN3|1908|endothelin 3##X52001|EDN3|1908|endothelin 3##BT007085|EDN3|1908|endothelin 3##DQ096281|EDN3|1908|endothelin 3##BC008876|EDN3|1908|endothelin 3##BC053866|EDN3|1908|endothelin 3##NM_000114|EDN3|1908|endothelin 3##NM_207032|EDN3|1908|endothelin 3##NM_207033|EDN3|1908|endothelin 3##NM_207034|EDN3|1908|endothelin 3##BC108303|PHACTR3|116154|phosphatase and actin regulator 3##AJ311122|PHACTR3|116154|phosphatase and actin regulator 3##NM_080672|PHACTR3|116154|phosphatase and actin regulator 3##BC117362|PHACTR3|116154|phosphatase and actin regulator 3##BC117364|PHACTR3|116154|phosphatase and actin regulator 3##AJ617581|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199506|PHACTR3|116154|phosphatase and actin regulator 3##AK316047|PHACTR3|116154|phosphatase and actin regulator 3##AB098521|PHACTR3|116154|phosphatase and actin regulator 3##AB098522|PHACTR3|116154|phosphatase and actin regulator 3##NM_183244|PHACTR3|116154|phosphatase and actin regulator 3##NM_183246|PHACTR3|116154|phosphatase and actin regulator 3	0.998719	CTCF.p2:-9:0.999
chr4	4109338	4109476	reg1004013.p1	14.644	+	BC044637 TSC_hg19_v1_chr4_-_3957162	-152252	-	J03853 NM_000683	-341112	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-341289	+	BC130430 BC130432 NM_177998	119210	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	140541	-	TSC_hg19_v1_chr4_-_4291782 AL136750 NM_001145725	182360	-	BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128##AL136750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_001145725|LYAR|55646|Ly1 antibody reactive homolog (mouse)	0.99954	CTCF.p2:-9:1.000
chr4	41890258	41890390	reg1003836.p1	14.643	+	BC025350 TSC_hg19_v1_chr4_-_41884589	-5745	-	TSC_hg19_v1_chr4_-_41750938 D82344 NM_003924	-139363	-	BC017199 TSC_hg19_v1_chr4_-_41750743 AK311082	-139592	-	TSC_hg19_v1_chr4_+_41937165 NM_018126 AK023062 AK001387 AK094190 AK308501 AY659966	46886	+	TSC_hg19_v1_chr4_+_41937386 BC000948 CU674470 CR457260	47110	+	NM_001029955 BC052943 BC104224 BC104225 AK122914 BC035027	93451	+	D82344|PHOX2B|8929|paired-like homeobox 2b##NM_003924|PHOX2B|8929|paired-like homeobox 2b##BC017199|PHOX2B|8929|paired-like homeobox 2b##NM_018126|TMEM33|55161|transmembrane protein 33##AK023062|TMEM33|55161|transmembrane protein 33##AK001387|TMEM33|55161|transmembrane protein 33##AK094190|TMEM33|55161|transmembrane protein 33##AK308501|TMEM33|55161|transmembrane protein 33##AY659966|TMEM33|55161|transmembrane protein 33##BC000948|TMEM33|55161|transmembrane protein 33##CR457260|TMEM33|55161|transmembrane protein 33##NM_001029955|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##BC052943|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##BC104224|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##BC104225|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##AK122914|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##BC035027|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1	0.999832	CTCF.p2:-6:1.000
chr2	198667843	198667976	reg1003461.p1	14.642	+	NM_197970 AK302817	-16923	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-17869	-	NM_138395 TSC_hg19_v1_chr2_+_198570134 AB107013 BC026361 BC126294 AK098121 AK301252 BC009115 HQ258326	-97780	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	1461	+	TSC_hg19_v1_chr2_-_200213802 AK025127	1545941	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	1652893	-	NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##NM_138395|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AB107013|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC026361|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC126294|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK098121|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK301252|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC009115|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##HQ258326|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2	0.202452	CTCF.p2:-17:0.202
chr15	45214980	45215102	reg1002910.p1	14.641	+	NM_080745 NM_182985	-186482	+	BC031266 TSC_hg19_v1_chr15_+_45021331	-193710	+	AK311550 TSC_hg19_v1_chr15_+_45021275 DQ232883	-193788	+	BC029537 NM_152448 DQ890983 DQ894158	33867	+	NM_003104 TSC_hg19_v1_chr15_+_45315395 AK312444 U07361 L29008 BC021085 AK295656 AK296574 AK309672 BC025295 AB529056 DQ892769 DQ896016	100349	+	TSC_hg19_v1_chr15_-_45406336 AF230496	191290	-	NM_080745|TRIM69|140691|tripartite motif containing 69##NM_182985|TRIM69|140691|tripartite motif containing 69##BC031266|TRIM69|140691|tripartite motif containing 69##DQ232883|TRIM69|140691|tripartite motif containing 69##BC029537|C15orf43|145645|chromosome 15 open reading frame 43##NM_152448|C15orf43|145645|chromosome 15 open reading frame 43##DQ890983|C15orf43|145645|chromosome 15 open reading frame 43##DQ894158|C15orf43|145645|chromosome 15 open reading frame 43##NM_003104|SORD|6652|sorbitol dehydrogenase##AK312444|SORD|6652|sorbitol dehydrogenase##U07361|SORD|6652|sorbitol dehydrogenase##L29008|SORD|6652|sorbitol dehydrogenase##BC021085|SORD|6652|sorbitol dehydrogenase##AK296574|SORD|6652|sorbitol dehydrogenase##AK309672|SORD|6652|sorbitol dehydrogenase##BC025295|SORD|6652|sorbitol dehydrogenase##DQ892769|SORD|6652|sorbitol dehydrogenase##DQ896016|SORD|6652|sorbitol dehydrogenase##AF230496|DUOX2|50506|dual oxidase 2	0.368185	CTCF.p2:11:0.368
chr22	38510623	38510751	reg1002438.p1	14.641	+	TSC_hg19_v1_chr22_-_38506676 AY358164 NM_025045	-4010	-	CU677367 TSC_hg19_v1_chr22_-_38506639 AK026235 BC015619	-4085	-	AF132610 NM_013356	-31529	-	CR456543 TSC_hg19_v1_chr22_-_38577838 AK291212 BC036742 AL080187 NM_001004426 NM_003560 AF064594 AK308308 BC051904 AK096521 AK290825 NM_001199562 AK300459	67106	-	NM_001161572 NM_001161574 NM_012323 TSC_hg19_v1_chr22_+_38597996 AK002001 BC067751 AK300932 AJ010857	87290	+	BC015037 TSC_hg19_v1_chr22_+_38598094 AB025247	87399	+	AY358164|BAIAP2L2|80115|BAI1-associated protein 2-like 2##NM_025045|BAIAP2L2|80115|BAI1-associated protein 2-like 2##AK026235|BAIAP2L2|80115|BAI1-associated protein 2-like 2##BC015619|BAIAP2L2|80115|BAI1-associated protein 2-like 2##AF132610|SLC16A8|23539|solute carrier family 16, member 8 (monocarboxylic acid transporter 3)##NM_013356|SLC16A8|23539|solute carrier family 16, member 8 (monocarboxylic acid transporter 3)##CR456543|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK291212|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##BC036742|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AL080187|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001004426|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_003560|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AF064594|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK308308|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##BC051904|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK096521|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK290825|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001199562|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK300459|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	0.72274	CTCF.p2:-7:0.616
chr8	33448561	33448682	reg1003013.p1	14.640	+	AK022588 NM_024787 TSC_hg19_v1_chr8_-_33424647	-23958	-	AK026916 TSC_hg19_v1_chr8_-_33370644 BX648410 BC007387 BC066935 NM_025115 NM_001102401	-77994	-	NM_032509 TSC_hg19_v1_chr8_+_33342703 AK314491 AK225476 AK027469 BC015965 AF251062 BC039740 BC028230 BC050528 CU690708	-105917	+	TSC_hg19_v1_chr8_-_33457295 BC067804	8666	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	8838	-	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	8874	-	AK022588|RNF122|79845|ring finger protein 122##NM_024787|RNF122|79845|ring finger protein 122##AK026916|TTI2|80185|TELO2 interacting protein 2##BX648410|TTI2|80185|TELO2 interacting protein 2##BC007387|TTI2|80185|TELO2 interacting protein 2##BC066935|TTI2|80185|TELO2 interacting protein 2##NM_025115|TTI2|80185|TELO2 interacting protein 2##NM_001102401|TTI2|80185|TELO2 interacting protein 2##NM_032509|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK314491|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK225476|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK027469|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC015965|MAK16|84549|MAK16 homolog (S. cerevisiae)##AF251062|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC039740|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC028230|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC050528|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC067804|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)	0.350793	CTCF.p2:16:0.351
chr15	101555527	101555638	reg1002090.p1	14.639	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-96070	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-96108	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-135511	+	AB071402 TSC_hg19_v1_chr15_-_101791795	236154	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	236553	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	262081	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.991951	CTCF.p2:-4:0.992
chr14	23452620	23452744	reg1003374.p1	14.637	+	TSC_hg19_v1_chr14_-_23451806 BC034968 NM_032876	-907	-	AK096128 NM_198086	-6251	-	AK025567 TSC_hg19_v1_chr14_-_23445979	-6747	-	BC014299 BX161507 BX161383 BX161417 AK023026 AK022216 NM_001130706 NM_001130708 NM_021944	26661	-	BT006777 S74378 D29011 BC004146 BX248299 AB528985 CU691272 TSC_hg19_v1_chr14_-_23504095 AK300714 BX538001 BC107720 BC057840 AK311895 AK225888	51340	-	NM_001144932 NM_002797 NM_001130725	51708	-	BC034968|AJUBA|84962|ajuba LIM protein##NM_032876|AJUBA|84962|ajuba LIM protein##AK096128|AJUBA|84962|ajuba LIM protein##NM_198086|AJUBA|84962|ajuba LIM protein##AK025567|AJUBA|84962|ajuba LIM protein##BC014299|C14orf93|60686|chromosome 14 open reading frame 93##BX161507|C14orf93|60686|chromosome 14 open reading frame 93##BX161383|C14orf93|60686|chromosome 14 open reading frame 93##BX161417|C14orf93|60686|chromosome 14 open reading frame 93##AK023026|C14orf93|60686|chromosome 14 open reading frame 93##AK022216|C14orf93|60686|chromosome 14 open reading frame 93##NM_001130706|C14orf93|60686|chromosome 14 open reading frame 93##NM_001130708|C14orf93|60686|chromosome 14 open reading frame 93##NM_021944|C14orf93|60686|chromosome 14 open reading frame 93##BT006777|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##S74378|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BX248299|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK300714|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BX538001|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BC107720|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BC057840|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK311895|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK225888|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_001144932|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_002797|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_001130725|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5	0.023597	
chr5	137785755	137785903	reg1003840.p1	14.635	+	AY562240 TSC_hg19_v1_chr5_+_137774899 AF251041	-10923	+	TSC_hg19_v1_chr5_+_137774760 AK056193 AK291101 AK223611 BC006218 NM_016606 AK293480 AK290547	-11101	+	TSC_hg19_v1_chr5_+_137688386 BC146788 AB029005 AB527166	-97394	+	TSC_hg19_v1_chr5_+_137801167 AK298101 AK301065	15342	+	TSC_hg19_v1_chr5_+_137801192 NM_001964 X52541 BC073983 M62829 M80583 BC041701 CU687282 AB591041 EU832310 EU832395	15485	+	TSC_hg19_v1_chr5_-_137848536 X80916	62724	-	AY562240|REEP2|51308|receptor accessory protein 2##AF251041|REEP2|51308|receptor accessory protein 2##AK056193|REEP2|51308|receptor accessory protein 2##AK291101|REEP2|51308|receptor accessory protein 2##AK223611|REEP2|51308|receptor accessory protein 2##BC006218|REEP2|51308|receptor accessory protein 2##NM_016606|REEP2|51308|receptor accessory protein 2##AK293480|REEP2|51308|receptor accessory protein 2##AK290547|REEP2|51308|receptor accessory protein 2##BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B##AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B##AK298101|EGR1|1958|early growth response 1##AK301065|EGR1|1958|early growth response 1##NM_001964|EGR1|1958|early growth response 1##X52541|EGR1|1958|early growth response 1##BC073983|EGR1|1958|early growth response 1##M62829|EGR1|1958|early growth response 1##M80583|EGR1|1958|early growth response 1##BC041701|EGR1|1958|early growth response 1##EU832310|EGR1|1958|early growth response 1##EU832395|EGR1|1958|early growth response 1##X80916|ETF1|2107|eukaryotic translation termination factor 1	0.973695	CTCF.p2:-1:0.974
chr5	142078780	142078914	reg1003842.p1	14.635	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-1276	-	M74028 NM_033136 AK312301	-12822	-	M60516 NM_000800	-13228	-	TSC_hg19_v1_chr5_+_142149971 BC068555	71125	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	71461	+	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	703976	-	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##M74028|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033136|FGF1|2246|fibroblast growth factor 1 (acidic)##AK312301|FGF1|2246|fibroblast growth factor 1 (acidic)##M60516|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.998313	CTCF.p2:12:0.998
chr4	159546147	159546292	reg1003247.p1	14.633	+	NM_001253727 NM_001253728 NM_001253729 NM_001253730 NM_001253732 NM_001253733 NM_021634 BX647985 BX647975 BX647980 AK307889 AK300379 AK312470 TSC_hg19_v1_chr4_+_159443033 AK295040 BC113617 BC143557 BC143558 BC143559 BC112142 BC143556 AK294694 AB208943 AF190500 AY899848 AY899849 AY899850 HQ258496	-103223	+	BC036551 BC048117 BC054487 TSC_hg19_v1_chr4_+_159131677 BC060875 BC035811 BC026318	-414545	+	NM_018342	-414819	+	TSC_hg19_v1_chr4_-_159593035 AK027539 BC065017 BC094775 NM_001008393	46871	-	TSC_hg19_v1_chr4_+_159593447 AK314803 NM_004453 BC011890 AK311435 BX538129 AK304838 S69232 EU093082 EU093083	47175	+	AB528445 CR542081 DQ891562 DQ894749 TSC_hg19_v1_chr4_-_159644545 BC014893 L11667 BC030707 AK313929 NM_005038	98309	-	NM_001253727|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253728|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253729|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253730|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253732|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253733|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_021634|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647985|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647975|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647980|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK307889|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK300379|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK312470|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK295040|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC113617|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143557|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143558|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143559|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC112142|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143556|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK294694|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AB208943|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AF190500|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899848|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899849|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899850|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##HQ258496|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC036551|TMEM144|55314|transmembrane protein 144##BC048117|TMEM144|55314|transmembrane protein 144##BC054487|TMEM144|55314|transmembrane protein 144##BC060875|TMEM144|55314|transmembrane protein 144##BC035811|TMEM144|55314|transmembrane protein 144##BC026318|TMEM144|55314|transmembrane protein 144##NM_018342|TMEM144|55314|transmembrane protein 144##AK027539|C4orf46|201725|chromosome 4 open reading frame 46##BC065017|C4orf46|201725|chromosome 4 open reading frame 46##BC094775|C4orf46|201725|chromosome 4 open reading frame 46##NM_001008393|C4orf46|201725|chromosome 4 open reading frame 46##AK314803|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##NM_004453|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BC011890|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BX538129|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##AK304838|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##S69232|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093082|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093083|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##CR542081|PPID|5481|peptidylprolyl isomerase D##DQ891562|PPID|5481|peptidylprolyl isomerase D##DQ894749|PPID|5481|peptidylprolyl isomerase D##BC014893|PPID|5481|peptidylprolyl isomerase D##L11667|PPID|5481|peptidylprolyl isomerase D##BC030707|PPID|5481|peptidylprolyl isomerase D##AK313929|PPID|5481|peptidylprolyl isomerase D##NM_005038|PPID|5481|peptidylprolyl isomerase D	0.961788	CTCF.p2:24:0.962
chr2	147840575	147840715	reg1002791.p1	14.632	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-2562724	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-2563014	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-2565442	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	761472	+	TSC_hg19_v1_chr2_+_148602300 AK314124	761690	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	762000	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.519227	CTCF.p2:-15:0.519
chr11	100447299	100447416	reg1002591.p1	14.631	+	AB013802 AB013803 NM_175566	-1020484	+	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	-1555608	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-4324183	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	110771	+	AK314174 AF247167 NM_032021	415407	+	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	552442	-	AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor	0.290286	CTCF.p2:-18:0.290
chr14	102427564	102427683	reg1002879.p1	14.631	+	AB451341 CU677587 D26445 AB463199 L42375 TSC_hg19_v1_chr14_+_102276338	-151314	+	TSC_hg19_v1_chr14_+_102276171 NM_002719 NM_178586 NM_178587 AK295449 AK315072 Z69030 U37352 BC016183	-151440	+	NM_001161725 NM_001161726 TSC_hg19_v1_chr14_+_102228166 AL834350 BC051442 AK131391 AK302470	-199437	+	TSC_hg19_v1_chr14_+_102430876 AB290157 NM_001376 AK299878	3205	+	TSC_hg19_v1_chr14_+_102430909 AB002323 AB527134	3338	+	TSC_hg19_v1_chr14_-_102553382 AJ890083 X07270 BC017233 BC001695 AK129557 AK291115 AK291607 AK300126 AK310595 BC121062 X15183	125741	-	AB451341|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##D26445|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##L42375|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_002719|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178586|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178587|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK315072|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##Z69030|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##U37352|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC016183|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_001161725|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_001161726|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AL834350|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC051442|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK131391|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK302470|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AB290157|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##NM_001376|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AK299878|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AB002323|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AJ890083|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##X07270|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC017233|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC001695|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK129557|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK291115|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK291607|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK300126|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK310595|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC121062|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##X15183|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1	0.941458	CTCF.p2:-18:0.941
chr17	61045949	61046067	reg1002243.p1	14.631	+	AK122947 AK093076 AX747906 BX648705 NM_152598	-160331	-	NM_001100875 BC035021	-161997	-	TSC_hg19_v1_chr17_+_60705060 BC150212 AF107292 AB384513	-340901	+	NM_025185	40889	+	BC144357 TSC_hg19_v1_chr17_+_61271368	225353	+	BC091485 NM_001017917	472182	-	AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_001100875|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC035021|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC150212|MRC2|9902|mannose receptor, C type 2##AF107292|MRC2|9902|mannose receptor, C type 2##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##BC091485|CYB561|1534|cytochrome b-561##NM_001017917|CYB561|1534|cytochrome b-561	1.805557	CTCF.p2:26:0.945	CTCF.p2:-32:0.861
chr13	113528935	113529054	reg1002712.p1	14.628	+	TSC_hg19_v1_chr13_+_113344493 NM_015205 NM_032189	-184415	+	TSC_hg19_v1_chr13_-_113344130 AK057085	-184888	-	AK129953 NM_207440	-227637	+	TSC_hg19_v1_chr13_+_113622764 AB002360	93791	+	TSC_hg19_v1_chr13_+_113623680 AK315969 NM_001112732 AK295670	94601	+	TSC_hg19_v1_chr13_+_113633625 AK307867	104645	+	NM_015205|ATP11A|23250|ATPase, class VI, type 11A##NM_032189|ATP11A|23250|ATPase, class VI, type 11A##AK057085|LOC440149|440149|uncharacterized LOC440149##AK129953|C13orf35|400165|chromosome 13 open reading frame 35##NM_207440|C13orf35|400165|chromosome 13 open reading frame 35##AB002360|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK315969|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##NM_001112732|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK295670|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK307867|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	0.951708	CTCF.p2:13:0.952
chr1	113259020	113259140	reg1003326.p1	14.627	+	BC011803 BC064628 AL133644 AB527803 EU832164 EU832258 AK093270 AX748024 BC073828 NM_005167	-1169	-	TSC_hg19_v1_chr1_-_113250031 NM_001042678 NM_175744	-9054	-	TSC_hg19_v1_chr1_-_113249750 AK094474	-9332	-	NM_001004440 NM_182759 BC112268 BC117479 BC143949 BC144042 BC144043 AY325116 AY325119	4113	+	BC045664 AK094064 NM_001166496 AF239919 AL162079 TSC_hg19_v1_chr1_-_113498818 AK296688 AK312500 BC026317	239637	-	TSC_hg19_v1_chr1_-_113498861 AK303603 AJ438943 NM_003051	239821	-	BC011803|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC064628|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AL133644|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832164|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832258|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AK093270|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC073828|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_005167|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_001042678|RHOC|389|ras homolog gene family, member C##NM_175744|RHOC|389|ras homolog gene family, member C##AK094474|RHOC|389|ras homolog gene family, member C##NM_001004440|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##NM_182759|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC112268|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC117479|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC143949|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144042|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144043|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325116|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325119|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC045664|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK094064|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_001166496|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AF239919|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AL162079|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK296688|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK312500|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC026317|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK303603|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AJ438943|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_003051|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)	0.783573	CTCF.p2:-8:0.784
chr19	51425625	51425745	reg1002134.p2	14.627	+	AF113140 AF259969 AY923170 BC069325 BC069403 BC069429 BC069489 BC096175 BC096176 BC096177 BC096178 CU686804 NM_004917	-11692	-	AK300527 AK309982 BC005196 NM_001002231 NM_005551 AK309985 AK300549 AK300566 AK309973 AY429509 AY429510 AF188745 AF188746 AF188747 S39329 CU675035 AB590372 DQ890672 DQ893853 AF336106 BT006650	-48977	+	AF335477 AF335478 AX772834 AX772836 BC005307 NM_001030047 NM_001030048 NM_001030050 NM_001648 S75755 U17040 X05332 BC056665 AJ310937 AJ459784 AJ310938 AK311887 AK312933 AJ459782 AJ459783 AJ512346 M26663 DQ890670 DQ893851 AB463810 CU690730 BT019862 M21895 M21896 M21897	-67489	+	AF168768 BC008036 AK223421 AF435980 AF435981 AY279380 AY279381 AY359010 NM_001077491 NM_001077492 NM_012427	30566	-	BC015525 AY318868 AY318869 AY318870 AY318867 NM_001012964 NM_001012965	46339	-	AF013988 AK314897 D78203 AY279383 NM_002774 U62801	47187	-	AF113140|KLK4|9622|kallikrein-related peptidase 4##AF259969|KLK4|9622|kallikrein-related peptidase 4##AY923170|KLK4|9622|kallikrein-related peptidase 4##BC069325|KLK4|9622|kallikrein-related peptidase 4##BC069403|KLK4|9622|kallikrein-related peptidase 4##BC069429|KLK4|9622|kallikrein-related peptidase 4##BC069489|KLK4|9622|kallikrein-related peptidase 4##BC096175|KLK4|9622|kallikrein-related peptidase 4##BC096176|KLK4|9622|kallikrein-related peptidase 4##BC096177|KLK4|9622|kallikrein-related peptidase 4##BC096178|KLK4|9622|kallikrein-related peptidase 4##NM_004917|KLK4|9622|kallikrein-related peptidase 4##AK300527|KLK2|3817|kallikrein-related peptidase 2##AK309982|KLK2|3817|kallikrein-related peptidase 2##BC005196|KLK2|3817|kallikrein-related peptidase 2##NM_001002231|KLK2|3817|kallikrein-related peptidase 2##NM_005551|KLK2|3817|kallikrein-related peptidase 2##AK309985|KLK2|3817|kallikrein-related peptidase 2##AK300549|KLK2|3817|kallikrein-related peptidase 2##AK300566|KLK2|3817|kallikrein-related peptidase 2##AK309973|KLK2|3817|kallikrein-related peptidase 2##AY429509|KLK2|3817|kallikrein-related peptidase 2##AY429510|KLK2|3817|kallikrein-related peptidase 2##AF188745|KLK2|3817|kallikrein-related peptidase 2##AF188746|KLK2|3817|kallikrein-related peptidase 2##AF188747|KLK2|3817|kallikrein-related peptidase 2##S39329|KLK2|3817|kallikrein-related peptidase 2##DQ890672|KLK2|3817|kallikrein-related peptidase 2##DQ893853|KLK2|3817|kallikrein-related peptidase 2##AF336106|KLK2|3817|kallikrein-related peptidase 2##BT006650|KLK2|3817|kallikrein-related peptidase 2##AF335477|KLK3|354|kallikrein-related peptidase 3##AF335478|KLK3|354|kallikrein-related peptidase 3##AX772834|KLK3|354|kallikrein-related peptidase 3##BC005307|KLK3|354|kallikrein-related peptidase 3##NM_001030047|KLK3|354|kallikrein-related peptidase 3##NM_001030048|KLK3|354|kallikrein-related peptidase 3##NM_001030050|KLK3|354|kallikrein-related peptidase 3##NM_001648|KLK3|354|kallikrein-related peptidase 3##S75755|KLK3|354|kallikrein-related peptidase 3##U17040|KLK3|354|kallikrein-related peptidase 3##X05332|KLK3|354|kallikrein-related peptidase 3##BC056665|KLK3|354|kallikrein-related peptidase 3##AJ310937|KLK3|354|kallikrein-related peptidase 3##AJ459784|KLK3|354|kallikrein-related peptidase 3##AJ310938|KLK3|354|kallikrein-related peptidase 3##AK312933|KLK3|354|kallikrein-related peptidase 3##AJ459782|KLK3|354|kallikrein-related peptidase 3##AJ459783|KLK3|354|kallikrein-related peptidase 3##AJ512346|KLK3|354|kallikrein-related peptidase 3##M26663|KLK3|354|kallikrein-related peptidase 3##DQ890670|KLK3|354|kallikrein-related peptidase 3##DQ893851|KLK3|354|kallikrein-related peptidase 3##BT019862|KLK3|354|kallikrein-related peptidase 3##M21895|KLK3|354|kallikrein-related peptidase 3##M21896|KLK3|354|kallikrein-related peptidase 3##M21897|KLK3|354|kallikrein-related peptidase 3##AF168768|KLK5|25818|kallikrein-related peptidase 5##BC008036|KLK5|25818|kallikrein-related peptidase 5##AK223421|KLK5|25818|kallikrein-related peptidase 5##AF435980|KLK5|25818|kallikrein-related peptidase 5##AF435981|KLK5|25818|kallikrein-related peptidase 5##AY279380|KLK5|25818|kallikrein-related peptidase 5##AY279381|KLK5|25818|kallikrein-related peptidase 5##AY359010|KLK5|25818|kallikrein-related peptidase 5##NM_001077491|KLK5|25818|kallikrein-related peptidase 5##NM_001077492|KLK5|25818|kallikrein-related peptidase 5##NM_012427|KLK5|25818|kallikrein-related peptidase 5##BC015525|KLK6|5653|kallikrein-related peptidase 6##AY318868|KLK6|5653|kallikrein-related peptidase 6##AY318869|KLK6|5653|kallikrein-related peptidase 6##AY318870|KLK6|5653|kallikrein-related peptidase 6##AY318867|KLK6|5653|kallikrein-related peptidase 6##NM_001012964|KLK6|5653|kallikrein-related peptidase 6##NM_001012965|KLK6|5653|kallikrein-related peptidase 6##AF013988|KLK6|5653|kallikrein-related peptidase 6##AK314897|KLK6|5653|kallikrein-related peptidase 6##D78203|KLK6|5653|kallikrein-related peptidase 6##AY279383|KLK6|5653|kallikrein-related peptidase 6##NM_002774|KLK6|5653|kallikrein-related peptidase 6##U62801|KLK6|5653|kallikrein-related peptidase 6	0.997198	CTCF.p2:5:0.997
chr2	137181141	137181278	reg1002249.p1	14.627	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-305533	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-307411	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-437993	-	TSC_hg19_v1_chr2_+_137523114 AK299929	341907	+	NM_001080427	567252	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1540725	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.992312	CTCF.p2:-9:0.992
chr7	32244131	32244255	reg1003132.p1	14.627	+	AK094180 NM_001191059 U40371 NM_005020	-133182	-	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	-133688	-	NM_001145123 NM_006658	-517563	+	NM_001191058	94189	-	TSC_hg19_v1_chr7_-_32529998 AJ238097 AF182291 CU675199 AB463843 BC005938 AK022772 AK024217 NM_012322	285804	-	NM_001130710 NM_001139499	290676	-	AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_001191058|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AJ238097|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182291|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC005938|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK022772|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK024217|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012322|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001130710|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001139499|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.030438	
chr11	60131078	60131216	reg1003641.p1	14.626	+	BC101783 AF333758 AF354931 BC069322 NM_139249 GQ129453 GQ129454 AF354933 BC034588 AF354932	-28765	+	NM_001243266 NM_024021 NM_148975 AK292089 AK075081 TSC_hg19_v1_chr11_+_60048138 BC020648 CU676600 DQ891395 DQ894573 AB022821 AK314033 AB013102	-83054	+	AK291870 NM_001247999 NM_152852	-179009	-	AK075106 NM_021201 NM_206938 NM_206939 NM_206940 AK297027 TSC_hg19_v1_chr11_+_60146004 BC043485 AF309653 AK309884	14840	+	TSC_hg19_v1_chr11_+_60146063 BC020673 AF237916 AF201951 AF350501	14912	+	NM_001079692 NM_032597	32339	+	BC101783|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF333758|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354931|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC069322|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_139249|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129453|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129454|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354933|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC034588|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354932|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_001243266|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_024021|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_148975|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK292089|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK075081|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC020648|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ891395|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ894573|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB022821|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK314033|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB013102|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK291870|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001247999|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK075106|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_021201|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206938|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206939|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206940|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK297027|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF309653|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK309884|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##BC020673|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF237916|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF201951|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF350501|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_001079692|MS4A14|84689|membrane-spanning 4-domains, subfamily A, member 14##NM_032597|MS4A14|84689|membrane-spanning 4-domains, subfamily A, member 14	0.999599	CTCF.p2:-20:1.000
chr1	223254856	223254974	reg1001487.p2	14.625	+	TSC_hg19_v1_chr1_+_222988422 NM_032890	-266524	+	AK125494 NM_207468	-344358	+	TSC_hg19_v1_chr1_+_222886732 AK315930 AK293974	-368182	+	TSC_hg19_v1_chr1_-_223316591 NM_003268	61691	-	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	282556	-	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	311850	+	NM_032890|DISP1|84976|dispatched homolog 1 (Drosophila)##AK125494|FAM177B|400823|family with sequence similarity 177, member B##NM_207468|FAM177B|400823|family with sequence similarity 177, member B##AK315930|BROX|148362|BRO1 domain and CAAX motif containing##AK293974|BROX|148362|BRO1 domain and CAAX motif containing##NM_003268|TLR5|7100|toll-like receptor 5##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4##NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65	0.922951	CTCF.p2:21:0.862
chr13	21499067	21499192	reg1003289.p1	14.625	+	TSC_hg19_v1_chr13_-_21476909 NM_022459	-22192	-	BC050680 AB051508 AB384273 AK057924 BC098402 TSC_hg19_v1_chr13_-_21476886 AK302760	-22259	-	TSC_hg19_v1_chr13_-_21348081 AK055408 AK316604	-151042	-	TSC_hg19_v1_chr13_-_21635685 BC127671 AF207547 AB209897 BC071572	136536	-	TSC_hg19_v1_chr13_-_21635719 NM_014572	136587	-	NM_005870 TSC_hg19_v1_chr13_+_21714679	215538	+	NM_022459|XPO4|64328|exportin 4##BC050680|XPO4|64328|exportin 4##AB051508|XPO4|64328|exportin 4##AK057924|XPO4|64328|exportin 4##BC098402|XPO4|64328|exportin 4##AK302760|XPO4|64328|exportin 4##AK316604|N6AMT2|221143|N-6 adenine-specific DNA methyltransferase 2 (putative)##BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##NM_005870|SAP18|10284|Sin3A-associated protein, 18kDa	0.951623	CTCF.p2:6:0.952
chr15	69351565	69351679	reg1002178.p1	14.623	+	NM_001184779 NM_024505 AF353088 AF353089 AK314689 AK074071	-44571	+	NM_001184780 NM_145658 AY358983 AF325189 AF325190 BC017998 AF275321 BC125097 BC125098 CU676134	-128707	+	TSC_hg19_v1_chr15_-_69113264 NM_006305	-238362	-	TSC_hg19_v1_chr15_+_69452935 BC142975 AY635582 NM_015554 AK098595 BC033828 BC019011	101276	+	TSC_hg19_v1_chr15_+_69591278 BC039234 NM_017705	239666	+	AK000197 AY424283 NM_001104554	255119	+	NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_001184780|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_145658|SPESP1|246777|sperm equatorial segment protein 1##AY358983|SPESP1|246777|sperm equatorial segment protein 1##AF325189|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF325190|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC017998|SPESP1|246777|sperm equatorial segment protein 1##AF275321|SPESP1|246777|sperm equatorial segment protein 1##BC125097|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC125098|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_006305|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AY635582|GLCE|26035|glucuronic acid epimerase##NM_015554|GLCE|26035|glucuronic acid epimerase##BC039234|PAQR5|54852|progestin and adipoQ receptor family member V##NM_017705|PAQR5|54852|progestin and adipoQ receptor family member V##AK000197|PAQR5|54852|progestin and adipoQ receptor family member V##AY424283|PAQR5|54852|progestin and adipoQ receptor family member V##NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V	0.989599	CTCF.p2:-21:0.990
chr12	133191609	133191711	reg1002261.p1	14.622	+	NM_001195520	-4624	-	NM_001142641	-124504	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-285803	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	3744	+	BC021559 TSC_hg19_v1_chr12_-_133215909	24182	-	TSC_hg19_v1_chr12_-_133263981 U49356 S60080 BC144561 L09561 NM_006231	72280	-	NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##NM_001142641|FBRSL1|57666|fibrosin-like 1##BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC021559|POLE|5426|polymerase (DNA directed), epsilon##U49356|POLE|5426|polymerase (DNA directed), epsilon##S60080|POLE|5426|polymerase (DNA directed), epsilon##BC144561|POLE|5426|polymerase (DNA directed), epsilon##L09561|POLE|5426|polymerase (DNA directed), epsilon##NM_006231|POLE|5426|polymerase (DNA directed), epsilon	0.998886	CTCF.p2:5:0.999
chr17	25572408	25572534	reg1003009.p1	14.621	+	NM_001190452	-3550035	+	TSC_hg19_v1_chr17_-_21454933 AK056436 BC132738 BC136630 BC019938 BC010612 BC052777 BC053952 NM_001113434	-4117548	-	FJ434338 NM_001194958	-4264024	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	48651	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	48810	+	BC035488 BC042106 NM_014238	226558	+	NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##AK056436|C17orf51|339263|chromosome 17 open reading frame 51##BC132738|C17orf51|339263|chromosome 17 open reading frame 51##BC136630|C17orf51|339263|chromosome 17 open reading frame 51##BC019938|C17orf51|339263|chromosome 17 open reading frame 51##BC010612|C17orf51|339263|chromosome 17 open reading frame 51##BC052777|C17orf51|339263|chromosome 17 open reading frame 51##BC053952|C17orf51|339263|chromosome 17 open reading frame 51##NM_001113434|C17orf51|339263|chromosome 17 open reading frame 51##FJ434338|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##NM_001194958|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1	0.691547	CTCF.p2:-11:0.692
chr19	48823383	48823514	reg1002157.p1	14.621	+	BC007730 NM_144577	-117	-	AK075062 NM_153608	-48795	+	TSC_hg19_v1_chr19_-_48759141 BC056891 BC034564 BC046136 NM_001184902 NM_001184904	-64277	-	TSC_hg19_v1_chr19_-_48825152 AK128144	1722	-	TSC_hg19_v1_chr19_+_48828629 NM_001425 U87947	5192	+	TSC_hg19_v1_chr19_+_48828847 BC009718 U52101	5386	+	BC007730|CCDC114|93233|coiled-coil domain containing 114##NM_144577|CCDC114|93233|coiled-coil domain containing 114##AK075062|ZNF114|163071|zinc finger protein 114##NM_153608|ZNF114|163071|zinc finger protein 114##BC056891|CARD8|22900|caspase recruitment domain family, member 8##BC034564|CARD8|22900|caspase recruitment domain family, member 8##BC046136|CARD8|22900|caspase recruitment domain family, member 8##NM_001184902|CARD8|22900|caspase recruitment domain family, member 8##NM_001184904|CARD8|22900|caspase recruitment domain family, member 8##AK128144|CCDC114|93233|coiled-coil domain containing 114##NM_001425|EMP3|2014|epithelial membrane protein 3##U87947|EMP3|2014|epithelial membrane protein 3##BC009718|EMP3|2014|epithelial membrane protein 3##U52101|EMP3|2014|epithelial membrane protein 3	0.99907	CTCF.p2:-2:0.999
chr6	41559825	41559954	reg1003786.p1	14.618	+	TSC_hg19_v1_chr6_+_41514342 BC052803	-45552	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	-45730	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-256323	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	46333	+	AJ608793 AJ608794 AJ608792 TSC_hg19_v1_chr6_-_41673723	113812	-	TSC_hg19_v1_chr6_-_41702787 AJ608787 BC032448 NM_007162	142876	-	BC052803|FOXP4|116113|forkhead box P4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor##AJ608793|TFEB|7942|transcription factor EB##AJ608794|TFEB|7942|transcription factor EB##AJ608792|TFEB|7942|transcription factor EB##AJ608787|TFEB|7942|transcription factor EB##BC032448|TFEB|7942|transcription factor EB##NM_007162|TFEB|7942|transcription factor EB	0.262614	CTCF.p2:14:0.263
chr7	7581154	7581271	reg1002191.p1	14.618	+	BC136892 BC144431 AJ890451 NM_001037763	-5758	-	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	-358965	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-715314	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	25376	+	TSC_hg19_v1_chr7_+_7606667 AK294561	25474	+	BT007320 AB464142 TSC_hg19_v1_chr7_-_7680067 L07493 BC005264 AK311842	98875	-	BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##AK294561|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BT007320|RPA3|6119|replication protein A3, 14kDa##L07493|RPA3|6119|replication protein A3, 14kDa##BC005264|RPA3|6119|replication protein A3, 14kDa##AK311842|RPA3|6119|replication protein A3, 14kDa	0.733934	CTCF.p2:15:0.734
chr3	128772331	128772454	reg1002459.p1	14.616	+	NM_024768	-51921	+	AK056377 BC038736 TSC_hg19_v1_chr3_-_128712920 AB033083 NM_020741	-59441	-	TSC_hg19_v1_chr3_+_128598520 CU680574 DQ893516 DQ896495	-173858	+	X52997 BC030229 NM_000174	7234	+	TSC_hg19_v1_chr3_-_128840462 BC082988 D45418 AK128345 AK291014 BC062319	68037	-	TSC_hg19_v1_chr3_-_128840648 AY166852 NM_001204886 NM_001204887 NM_001204888 NM_198490 NM_001204885	68292	-	NM_024768|CCDC48|79825|coiled-coil domain containing 48##AK056377|KIAA1257|57501|KIAA1257##BC038736|KIAA1257|57501|KIAA1257##AB033083|KIAA1257|57501|KIAA1257##NM_020741|KIAA1257|57501|KIAA1257##DQ893516|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##DQ896495|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##X52997|GP9|2815|glycoprotein IX (platelet)##BC030229|GP9|2815|glycoprotein IX (platelet)##NM_000174|GP9|2815|glycoprotein IX (platelet)##D45418|RAB43|339122|RAB43, member RAS oncogene family##AK128345|RAB43|339122|RAB43, member RAS oncogene family##AK291014|RAB43|339122|RAB43, member RAS oncogene family##BC062319|RAB43|339122|RAB43, member RAS oncogene family##AY166852|RAB43|339122|RAB43, member RAS oncogene family##NM_001204886|RAB43|339122|RAB43, member RAS oncogene family##NM_001204887|RAB43|339122|RAB43, member RAS oncogene family##NM_001204888|RAB43|339122|RAB43, member RAS oncogene family##NM_198490|RAB43|339122|RAB43, member RAS oncogene family##NM_001204885|RAB43|339122|RAB43, member RAS oncogene family	0.076805	
chr19	17970373	17970491	reg1002529.p1	14.614	+	TSC_hg19_v1_chr19_-_17958822 U31601 AK296383 NM_000215 AK304392	-11586	-	TSC_hg19_v1_chr19_-_17958781 BC028068	-11643	-	BC032810 BC040435 BC053345 BC061886 BC106721 BC071706 BC106722 NM_005543 S72482 AK302780 AY082014	-38085	-	TSC_hg19_v1_chr19_+_17970726 BC066319 AK297323 AK222647 AK311774 D28393 NM_000980 AK297358 AK300809 BC007512 BC071920 L05093 X80822 AB528676 CU688140	285	+	BX648217 NM_000453 U66088 D87920	12398	+	TSC_hg19_v1_chr19_+_18043824 NM_001136203	73392	+	U31601|JAK3|3718|Janus kinase 3##AK296383|JAK3|3718|Janus kinase 3##NM_000215|JAK3|3718|Janus kinase 3##AK304392|JAK3|3718|Janus kinase 3##BC028068|JAK3|3718|Janus kinase 3##BC032810|INSL3|3640|insulin-like 3 (Leydig cell)##BC040435|INSL3|3640|insulin-like 3 (Leydig cell)##BC053345|INSL3|3640|insulin-like 3 (Leydig cell)##BC061886|INSL3|3640|insulin-like 3 (Leydig cell)##BC106721|INSL3|3640|insulin-like 3 (Leydig cell)##BC071706|INSL3|3640|insulin-like 3 (Leydig cell)##BC106722|INSL3|3640|insulin-like 3 (Leydig cell)##NM_005543|INSL3|3640|insulin-like 3 (Leydig cell)##S72482|INSL3|3640|insulin-like 3 (Leydig cell)##AK302780|INSL3|3640|insulin-like 3 (Leydig cell)##AY082014|INSL3|3640|insulin-like 3 (Leydig cell)##BC066319|RPL18A|6142|ribosomal protein L18a##AK297323|RPL18A|6142|ribosomal protein L18a##AK222647|RPL18A|6142|ribosomal protein L18a##AK311774|RPL18A|6142|ribosomal protein L18a##D28393|RPL18A|6142|ribosomal protein L18a##NM_000980|RPL18A|6142|ribosomal protein L18a##AK297358|RPL18A|6142|ribosomal protein L18a##AK300809|RPL18A|6142|ribosomal protein L18a##BC007512|RPL18A|6142|ribosomal protein L18a##BC071920|RPL18A|6142|ribosomal protein L18a##L05093|RPL18A|6142|ribosomal protein L18a##X80822|RPL18A|6142|ribosomal protein L18a##BX648217|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##NM_000453|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##U66088|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##D87920|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##NM_001136203|CCDC124|115098|coiled-coil domain containing 124	0.030771	
chrX	9677133	9677271	reg1003550.p1	14.613	+	TSC_hg19_v1_chrX_+_9433108 Y12781 BC052304 NM_005647	-243968	+	TSC_hg19_v1_chrX_+_9431357 AK289409 NM_001139466 NM_001139467 NM_001139468 AK290962 BC032708	-245855	+	BC120955 BC120956 NM_205849	-676100	-	Z48804 BC015657 BC068977 NM_000273	56758	-	TSC_hg19_v1_chrX_+_9754468 NM_001649 X83543	77278	+	BC140866 TSC_hg19_v1_chrX_+_9754543	77341	+	Y12781|TBL1X|6907|transducin (beta)-like 1X-linked##BC052304|TBL1X|6907|transducin (beta)-like 1X-linked##NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked##AK289409|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139466|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139467|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139468|TBL1X|6907|transducin (beta)-like 1X-linked##AK290962|TBL1X|6907|transducin (beta)-like 1X-linked##BC032708|TBL1X|6907|transducin (beta)-like 1X-linked##BC120955|FAM9B|171483|family with sequence similarity 9, member B##BC120956|FAM9B|171483|family with sequence similarity 9, member B##NM_205849|FAM9B|171483|family with sequence similarity 9, member B##Z48804|GPR143|4935|G protein-coupled receptor 143##BC015657|GPR143|4935|G protein-coupled receptor 143##BC068977|GPR143|4935|G protein-coupled receptor 143##NM_000273|GPR143|4935|G protein-coupled receptor 143##NM_001649|SHROOM2|357|shroom family member 2##X83543|SHROOM2|357|shroom family member 2##BC140866|SHROOM2|357|shroom family member 2	0.999431	CTCF.p2:17:0.999
chr5	133204968	133205109	reg1003370.p1	14.612	+	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	-256800	-	TSC_hg19_v1_chr5_-_132948202 AK055684	-256839	-	TSC_hg19_v1_chr5_+_132432890 AK315862	-772147	+	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	99337	-	TSC_hg19_v1_chr5_-_133340377 BC008482	135329	-	TSC_hg19_v1_chr5_-_133340386 BC090042	135345	-	NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##AK055684|FSTL4|23105|follistatin-like 4##AK315862|HSPA4|3308|heat shock 70kDa protein 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15##BC008482|VDAC1|7416|voltage-dependent anion channel 1##BC090042|VDAC1|7416|voltage-dependent anion channel 1	0.881926	CTCF.p2:11:0.882
chr7	67090288	67090422	reg1003323.p1	14.612	+	TSC_hg19_v1_chr7_+_66767656 BC026058	-322698	+	TSC_hg19_v1_chr7_+_66767642 AK307290	-322707	+	TSC_hg19_v1_chr7_+_66767639 AK023257 AK308931	-322747	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	1973481	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	1973974	+	TSC_hg19_v1_chr7_+_69064580 BC011643	1974233	+	BC026058|STAG3L4|64940|stromal antigen 3-like 4##AK307290|STAG3L4|64940|stromal antigen 3-like 4##AK023257|STAG3L4|64940|stromal antigen 3-like 4##AK308931|STAG3L4|64940|stromal antigen 3-like 4##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2	0.479561	CTCF.p2:-2:0.480
chr16	27468532	27468674	reg1003207.p1	14.611	+	NM_021798 AY358826 AF254067	-29999	+	AK292663 NM_181078 NM_181079 AK312825	-55116	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-127259	+	TSC_hg19_v1_chr16_-_27561218 BX648143	92615	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	92628	-	TSC_hg19_v1_chr16_-_27561248 NM_001520 U02619	92666	-	NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##NM_001520|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##U02619|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.999758	CTCF.p2:18:1.000
chr17	46671337	46671458	reg1002536.p1	14.610	+	M92299 TSC_hg19_v1_chr17_-_46671405	-30	-	AB464575 BC117247 NM_002147 TSC_hg19_v1_chr17_-_46671142 AK314964	-297	-	AK315102 TSC_hg19_v1_chr17_-_46667604 AK316245 AK291182	-3784	-	BC014651 NM_018952 TSC_hg19_v1_chr17_-_46682349 AK292200	10947	-	M30598 S49765 TSC_hg19_v1_chr17_-_46688105	16619	-	CU677273 BC015345 AK290653 TSC_hg19_v1_chr17_-_46688350	16917	-	M92299|HOXB5|3215|homeobox B5##BC117247|HOXB5|3215|homeobox B5##NM_002147|HOXB5|3215|homeobox B5##AK314964|HOXB5|3215|homeobox B5##AK315102|HOXB3|3213|homeobox B3##AK316245|HOXB3|3213|homeobox B3##AK291182|HOXB3|3213|homeobox B3##BC014651|HOXB6|3216|homeobox B6##NM_018952|HOXB6|3216|homeobox B6##AK292200|HOXB6|3216|homeobox B6##M30598|HOXB7|3217|homeobox B7##S49765|HOXB7|3217|homeobox B7##BC015345|HOXB7|3217|homeobox B7##AK290653|HOXB7|3217|homeobox B7	0.533015	CTCF.p2:11:0.533
chr15	40571707	40571829	reg1003529.p1	14.609	+	TSC_hg19_v1_chr15_+_40545348 BC035596	-26402	+	AK095915 NM_001039905 BC171826	-26629	-	NM_020168 AJ236915	-39715	+	NM_001190479	3018	-	BT006905 CU674468 TSC_hg19_v1_chr15_-_40599904 AB209583	28128	-	TSC_hg19_v1_chr15_-_40599986 BC000939	28223	-	BC035596|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AK095915|C15orf56|644809|chromosome 15 open reading frame 56##NM_001039905|C15orf56|644809|chromosome 15 open reading frame 56##NM_020168|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AJ236915|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##NM_001190479|ANKRD63|100131244|ankyrin repeat domain 63##BT006905|PLCB2|5330|phospholipase C, beta 2##AB209583|PLCB2|5330|phospholipase C, beta 2##BC000939|PLCB2|5330|phospholipase C, beta 2	0.999915	CTCF.p2:4:1.000
chr19	54871147	54871300	reg1003621.p1	14.608	+	BC109198 BC109199 NM_012276	-20821	-	AF499917 EU915611 EU915612 AF499916 AF499919 AF499918 AF324830 NM_021250 NM_181879 NM_181985 NM_181986	-46848	-	AF014923 AF014924 AF041262 CU688428 DQ891075 DQ894258 AB590305 NM_001172654 U91926 BC028208 AF025527 NM_006865 TSC_hg19_v1_chr19_-_54804279	-66986	-	CR542051 CU693316 DQ892072 DQ895266 AF251509 AF251510 BC027899 AF109683 AF013249 AK309895 TSC_hg19_v1_chr19_-_54876492	5229	-	TSC_hg19_v1_chr19_-_54876541 AK290415 AK315419	5328	-	TSC_hg19_v1_chr19_-_54876672 NM_002287 NM_021706	5472	-	BC109198|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##BC109199|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##NM_012276|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##AF499917|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##EU915611|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##EU915612|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499916|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499919|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499918|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF324830|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_021250|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181879|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181985|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181986|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF014923|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF014924|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF041262|LILRA6|79168|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6##DQ891075|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##DQ894258|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##NM_001172654|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##U91926|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##BC028208|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF025527|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##NM_006865|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##CR542051|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##DQ892072|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##DQ895266|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF251509|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF251510|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##BC027899|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF109683|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF013249|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK309895|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK290415|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK315419|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##NM_002287|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##NM_021706|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1	0.997013	CTCF.p2:-6:0.997
chrX	68442072	68442191	reg1001619.p1	14.606	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	-56825	-	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	-393276	+	TSC_hg19_v1_chrX_+_67913490 D80011	-528640	+	AF087142 NM_015686 BC136518 BC136519	282952	+	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	393804	+	AB528121 AY605053 NM_001002254	827653	-	AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B##AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A##AY605053|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##NM_001002254|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2	0.96081	CTCF.p2:14:0.961
chr10	15148514	15148649	reg1003359.p1	14.602	+	TSC_hg19_v1_chr10_+_15139363 AK057006 U77664 BC029494	-9218	+	AK314131 BC029034 NM_153244	-9272	-	NM_001097590 NM_006414 NM_183005 TSC_hg19_v1_chr10_+_15139195 AK223418	-9389	+	BC157831 BC171823 TSC_hg19_v1_chr10_-_15197364	48774	-	BT007024 CU675371 DQ890667 DQ893848 BC006376 AK315085 AK094904 AF043325 TSC_hg19_v1_chr10_-_15210693 NM_004808	62080	-	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	264568	-	AK057006|RPP38|10557|ribonuclease P/MRP 38kDa subunit##U77664|RPP38|10557|ribonuclease P/MRP 38kDa subunit##BC029494|RPP38|10557|ribonuclease P/MRP 38kDa subunit##AK314131|C10orf111|221060|chromosome 10 open reading frame 111##BC029034|C10orf111|221060|chromosome 10 open reading frame 111##NM_153244|C10orf111|221060|chromosome 10 open reading frame 111##NM_001097590|RPP38|10557|ribonuclease P/MRP 38kDa subunit##NM_006414|RPP38|10557|ribonuclease P/MRP 38kDa subunit##NM_183005|RPP38|10557|ribonuclease P/MRP 38kDa subunit##AK223418|RPP38|10557|ribonuclease P/MRP 38kDa subunit##BC157831|LOC100192204|100192204|peptidylprolyl isomerase A (cyclophilin A) pseudogene##BT007024|NMT2|9397|N-myristoyltransferase 2##DQ890667|NMT2|9397|N-myristoyltransferase 2##DQ893848|NMT2|9397|N-myristoyltransferase 2##BC006376|NMT2|9397|N-myristoyltransferase 2##AK315085|NMT2|9397|N-myristoyltransferase 2##AK094904|NMT2|9397|N-myristoyltransferase 2##AF043325|NMT2|9397|N-myristoyltransferase 2##NM_004808|NMT2|9397|N-myristoyltransferase 2##AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1	0.967713	CTCF.p2:7:0.968
chr9	6354233	6354374	reg1004100.p1	14.602	+	NM_001001874 NM_001001875 NM_033516 AK057479 AY032877 BC017589 BC042113 BC033792	-25928	+	NM_001199640 NM_001199641 NM_033439 AK295908 AK313414 TSC_hg19_v1_chr9_+_6215806 AK303943 BC047085	-138507	+	AF039023 AK300408 BC098406 TSC_hg19_v1_chr9_-_6015616 AK307840 BX537405 NM_001243202 NM_001243203 NM_012416	-338672	-	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	58841	+	TSC_hg19_v1_chr9_+_6413200 AK308433	58894	+	TSC_hg19_v1_chr9_+_6413338 AF274049 AB071698 EU176286 EU176602 AB385208	59102	+	NM_001001874|TPD52L3|89882|tumor protein D52-like 3##NM_001001875|TPD52L3|89882|tumor protein D52-like 3##NM_033516|TPD52L3|89882|tumor protein D52-like 3##AK057479|TPD52L3|89882|tumor protein D52-like 3##AY032877|TPD52L3|89882|tumor protein D52-like 3##BC017589|TPD52L3|89882|tumor protein D52-like 3##BC042113|TPD52L3|89882|tumor protein D52-like 3##BC033792|TPD52L3|89882|tumor protein D52-like 3##NM_001199640|IL33|90865|interleukin 33##NM_001199641|IL33|90865|interleukin 33##NM_033439|IL33|90865|interleukin 33##AK295908|IL33|90865|interleukin 33##AK313414|IL33|90865|interleukin 33##AK303943|IL33|90865|interleukin 33##BC047085|IL33|90865|interleukin 33##AF039023|RANBP6|26953|RAN binding protein 6##AK300408|RANBP6|26953|RAN binding protein 6##BC098406|RANBP6|26953|RAN binding protein 6##BX537405|RANBP6|26953|RAN binding protein 6##NM_001243202|RANBP6|26953|RAN binding protein 6##NM_001243203|RANBP6|26953|RAN binding protein 6##NM_012416|RANBP6|26953|RAN binding protein 6##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK308433|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	0.861174	CTCF.p2:-11:0.861
chr4	40311356	40311510	reg1003854.p1	14.600	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-112792	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-252901	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-331840	-	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	26012	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	205151	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	206525	-	NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47	0.998878	CTCF.p2:-8:0.999
chr17	36823910	36824019	reg1002227.p2	14.599	+	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	-61768	-	BC029278 TSC_hg19_v1_chr17_-_36760969	-63026	-	TSC_hg19_v1_chr17_-_36729122 AK295027	-94842	-	TSC_hg19_v1_chr17_-_36831211 NM_001130677	7221	-	TSC_hg19_v1_chr17_+_36861421 BC064612	37635	+	TSC_hg19_v1_chr17_+_36861879 AK310435 AK310437 NM_005937 AB384930 CU687922 U07932 AB209633	37926	+	AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96##BC064612|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	0.439969	CTCF.p2:4:0.440
chr17	18958880	18959009	reg1002902.p1	14.597	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-8658	-	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-50865	-	AK057946 NM_001042450 NM_152351 AK298345 BC062617 BC034380	-103440	+	BC157869 NM_001129778	71837	+	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	181764	+	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	307025	-	BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##AK057946|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001042450|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_152351|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##AK298345|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC062617|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC034380|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1	0.426422	CTCF.p2:20:0.426
chr1	57297692	57297811	reg1003203.p1	14.595	+	AK125198 NM_001004303 TSC_hg19_v1_chr1_-_57285379	-12378	-	TSC_hg19_v1_chr1_+_57110986 AK314011 NM_006252 U06454 BC069680 BC069740 BC069823 EF056019	-186849	+	TSC_hg19_v1_chr1_-_57045237 NM_003713	-252506	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	22757	+	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	133965	-	TSC_hg19_v1_chr1_-_57888785 AK313144	591077	-	AK125198|C1orf168|199920|chromosome 1 open reading frame 168##NM_001004303|C1orf168|199920|chromosome 1 open reading frame 168##AK314011|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_006252|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##U06454|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069680|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069740|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069823|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##EF056019|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_003713|PPAP2B|8613|phosphatidic acid phosphatase type 2B##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide##AK313144|DAB1|1600|disabled homolog 1 (Drosophila)	0.985934	CTCF.p2:-10:0.986
chr17	48277972	48278089	reg1000126.p1	14.595	+	S67495 TSC_hg19_v1_chr17_-_48274424	-3617	-	Y15917 TSC_hg19_v1_chr17_-_48272117	-5985	-	X98707 TSC_hg19_v1_chr17_-_48271508	-6589	-	AB384988 DQ893571 EU176569 CU691368 M36546 X07884 AB209597 TSC_hg19_v1_chr17_-_48278986	900	-	TSC_hg19_v1_chr17_-_48278993 BC036531 Z74615 NM_000088	963	-	AY358204 NM_001168215	70736	+	DQ893571|COL1A1|1277|collagen, type I, alpha 1##EU176569|COL1A1|1277|collagen, type I, alpha 1##M36546|COL1A1|1277|collagen, type I, alpha 1##X07884|COL1A1|1277|collagen, type I, alpha 1##AB209597|COL1A1|1277|collagen, type I, alpha 1##BC036531|COL1A1|1277|collagen, type I, alpha 1##Z74615|COL1A1|1277|collagen, type I, alpha 1##NM_000088|COL1A1|1277|collagen, type I, alpha 1##AY358204|TMEM92|162461|transmembrane protein 92##NM_001168215|TMEM92|162461|transmembrane protein 92	0.883673	CTCF.p2:2:0.884
chr2	114147970	114148125	reg1002099.p1	14.595	+	S77904 S77905 S77906 X69699 BC001060 AK292191 AK309154 AK225538 NM_003466 NM_013952 NM_013953 NM_013992 TSC_hg19_v1_chr2_-_114036499	-111554	-	TSC_hg19_v1_chr2_+_113993123 AK056052 AK307781 BX537688 AK056355 AK130275	-154777	+	TSC_hg19_v1_chr2_+_113931576 BC035307 BC073151	-216466	+	AK290072 NM_172003 AK303653 AY343910 TSC_hg19_v1_chr2_+_114195398 AY320414 BC120991 BC120992 AK225251 AF452722	47292	+	AK122950 NM_012184 BC136428 AY344639 AF452723	108689	+	AL137714 AK302089 AK308574 TSC_hg19_v1_chr2_+_114341674	193570	+	S77904|PAX8|7849|paired box 8##S77905|PAX8|7849|paired box 8##S77906|PAX8|7849|paired box 8##X69699|PAX8|7849|paired box 8##BC001060|PAX8|7849|paired box 8##AK292191|PAX8|7849|paired box 8##AK309154|PAX8|7849|paired box 8##AK225538|PAX8|7849|paired box 8##NM_003466|PAX8|7849|paired box 8##NM_013952|PAX8|7849|paired box 8##NM_013953|PAX8|7849|paired box 8##NM_013992|PAX8|7849|paired box 8##AK056052|LOC654433|654433|uncharacterized LOC654433##AK307781|LOC654433|654433|uncharacterized LOC654433##BX537688|LOC654433|654433|uncharacterized LOC654433##AK056355|LOC654433|654433|uncharacterized LOC654433##AK130275|LOC654433|654433|uncharacterized LOC654433##BC035307|PSD4|23550|pleckstrin and Sec7 domain containing 4##BC073151|PSD4|23550|pleckstrin and Sec7 domain containing 4##AK290072|CBWD2|150472|COBW domain containing 2##NM_172003|CBWD2|150472|COBW domain containing 2##AK303653|CBWD2|150472|COBW domain containing 2##AY343910|CBWD2|150472|COBW domain containing 2##AY320414|CBWD1|55871|COBW domain containing 1##BC120991|CBWD2|150472|COBW domain containing 2##BC120992|CBWD2|150472|COBW domain containing 2##AK225251|CBWD2|150472|COBW domain containing 2##AF452722|CBWD2|150472|COBW domain containing 2##AK122950|FOXD4L1|200350|forkhead box D4-like 1##NM_012184|FOXD4L1|200350|forkhead box D4-like 1##BC136428|FOXD4L1|200350|forkhead box D4-like 1##AY344639|FOXD4L1|200350|forkhead box D4-like 1##AF452723|FOXD4L1|200350|forkhead box D4-like 1##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene	1.620937	CTCF.p2:-29:0.990	CTCF.p2:38:0.631
chr9	86876169	86876299	reg1003260.p1	14.595	+	NM_024945 TSC_hg19_v1_chr9_+_86595689 BC039999 BC020606 AK022950 BC044571 BC053549 BC032494	-280525	+	TSC_hg19_v1_chr9_-_86595531 BC014980 AK291336 X72727 NM_002140 NM_031262	-280695	-	TSC_hg19_v1_chr9_-_86595168 NM_031263	-281059	-	BC093821 BC093823 AK310861 AK304406 AK314039 AK292849 NM_001199633	79400	-	AF305210 NM_022127	107178	-	TSC_hg19_v1_chr9_+_87283453 BC075804 NM_001018064 NM_006180 AB209118	407227	+	NM_024945|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC039999|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC020606|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##AK022950|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC044571|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC053549|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC032494|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC014980|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##AK291336|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##X72727|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_002140|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_031262|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_031263|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##BC093821|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093823|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK310861|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK304406|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK314039|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK292849|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_001199633|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AF305210|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_022127|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC075804|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018064|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_006180|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB209118|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	0.998614	CTCF.p2:17:0.999
chr15	40049187	40049316	reg1003111.p1	14.594	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	-175922	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	-506326	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-1060453	+	AK093308 AX748045 BC045191 NM_152597	25777	-	AK091251 TSC_hg19_v1_chr15_+_40075106	25855	+	CU688250 TSC_hg19_v1_chr15_-_40212342	163034	-	AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.999634	CTCF.p2:21:1.000
chr20	36851186	36851315	reg1003385.p1	14.594	+	TSC_hg19_v1_chr20_-_36793673 AK291714 AK058031 AK295775 AK300292 AK314618 BC003551 NM_004613 NM_198951	-57571	-	TSC_hg19_v1_chr20_-_36758362 M98479	-92859	-	TSC_hg19_v1_chr20_+_36662228 AB463518 CU689672	-188973	+	AK096202 NM_001029864	37923	-	NM_001725 BC040955 TSC_hg19_v1_chr20_+_36932591 AK315328 AX713278 AX746123 AX752831 J04739 AK296568 BC032230 CU691936 DQ414688 AF322588	81338	+	TSC_hg19_v1_chr20_+_36974884 AK313625 BC022256 NM_004139 AY344471 AF105067 AB590524 CU692512 DQ891394 DQ894434 M35533	123621	+	AK291714|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK058031|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK295775|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK300292|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK314618|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC003551|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_004613|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_198951|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##M98479|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755##NM_001725|BPI|671|bactericidal/permeability-increasing protein##BC040955|BPI|671|bactericidal/permeability-increasing protein##AK315328|BPI|671|bactericidal/permeability-increasing protein##AX713278|BPI|671|bactericidal/permeability-increasing protein##AX746123|BPI|671|bactericidal/permeability-increasing protein##AX752831|BPI|671|bactericidal/permeability-increasing protein##J04739|BPI|671|bactericidal/permeability-increasing protein##AK296568|BPI|671|bactericidal/permeability-increasing protein##BC032230|BPI|671|bactericidal/permeability-increasing protein##DQ414688|BPI|671|bactericidal/permeability-increasing protein##AF322588|BPI|671|bactericidal/permeability-increasing protein##AK313625|LBP|3929|lipopolysaccharide binding protein##BC022256|LBP|3929|lipopolysaccharide binding protein##NM_004139|LBP|3929|lipopolysaccharide binding protein##AY344471|LBP|3929|lipopolysaccharide binding protein##AF105067|LBP|3929|lipopolysaccharide binding protein##DQ891394|LBP|3929|lipopolysaccharide binding protein##DQ894434|LBP|3929|lipopolysaccharide binding protein##M35533|LBP|3929|lipopolysaccharide binding protein	0.332649	CTCF.p2:16:0.333
chr10	106051274	106051404	reg1002930.p1	14.593	+	BC046194 NM_001191014 NM_001191015 BC023583 AK297522	-16435	+	AK300508 AK296266 TSC_hg19_v1_chr10_+_106034669 CU691188 AY191318	-16677	+	TSC_hg19_v1_chr10_+_106028947 AY209189 AY350731 AK291886	-22398	+	BC070108 NM_033397	42323	-	AB051541 TSC_hg19_v1_chr10_-_106098200 AK129877	46850	-	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	62202	+	BC046194|GSTO2|119391|glutathione S-transferase omega 2##NM_001191014|GSTO2|119391|glutathione S-transferase omega 2##NM_001191015|GSTO2|119391|glutathione S-transferase omega 2##BC023583|GSTO2|119391|glutathione S-transferase omega 2##AK297522|GSTO2|119391|glutathione S-transferase omega 2##AK300508|GSTO2|119391|glutathione S-transferase omega 2##AK296266|GSTO2|119391|glutathione S-transferase omega 2##AY191318|GSTO2|119391|glutathione S-transferase omega 2##AY209189|GSTO2|119391|glutathione S-transferase omega 2##AY350731|GSTO2|119391|glutathione S-transferase omega 2##AK291886|GSTO2|119391|glutathione S-transferase omega 2##BC070108|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##NM_033397|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##AB051541|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147	0.998726	CTCF.p2:-23:0.999
chr9	138304534	138304664	reg1003262.p1	14.593	+	AK290478 TSC_hg19_v1_chr9_+_137979513	-325085	+	TSC_hg19_v1_chr9_+_137967404 AK289921 CU679089 BT007146	-337108	+	BC008763 BC011741 TSC_hg19_v1_chr9_+_137967372 AK289719	-337226	+	TSC_hg19_v1_chr9_+_138371663 AB014549 NM_014811	67051	+	AY927868 DQ892784 DQ896031 NM_001048265 NM_144654	87129	-	TSC_hg19_v1_chr9_+_138392535 NM_016034 BC008017 BC013108 AB055388 AF151849	87914	+	AK290478|OLFM1|10439|olfactomedin 1##AK289921|OLFM1|10439|olfactomedin 1##BT007146|OLFM1|10439|olfactomedin 1##BC008763|OLFM1|10439|olfactomedin 1##BC011741|OLFM1|10439|olfactomedin 1##AK289719|OLFM1|10439|olfactomedin 1##AB014549|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##NM_014811|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##AY927868|C9orf116|138162|chromosome 9 open reading frame 116##DQ892784|C9orf116|138162|chromosome 9 open reading frame 116##DQ896031|C9orf116|138162|chromosome 9 open reading frame 116##NM_001048265|C9orf116|138162|chromosome 9 open reading frame 116##NM_144654|C9orf116|138162|chromosome 9 open reading frame 116##NM_016034|MRPS2|51116|mitochondrial ribosomal protein S2##BC008017|MRPS2|51116|mitochondrial ribosomal protein S2##BC013108|MRPS2|51116|mitochondrial ribosomal protein S2##AB055388|MRPS2|51116|mitochondrial ribosomal protein S2##AF151849|MRPS2|51116|mitochondrial ribosomal protein S2	0.970832	CTCF.p2:-16:0.971
chr1	186451944	186452064	reg1002557.p1	14.591	+	M33478 NM_002597	-21777	-	AF076464 NM_022576	-34149	-	BC069096 NM_022375	-82301	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	197486	-	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	346084	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	3994731	-	M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AF076464|PDC|5132|phosducin##NM_022576|PDC|5132|phosducin##BC069096|OCLM|10896|oculomedin##NM_022375|OCLM|10896|oculomedin##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C	0.219597	CTCF.p2:-9:0.220
chr16	55746326	55746449	reg1003947.p1	14.591	+	BC039309 NM_001172502 AK301811	-40785	+	NM_001043 BC060831 NM_001172504	-55934	+	TSC_hg19_v1_chr16_+_55689899 AK312793 M65105	-56402	+	DQ891472 DQ894656 AK301651 AB025026 TSC_hg19_v1_chr16_-_55867009 M73499 S73751 AF177775 BC009706 AY268104 L07764	120606	-	BC110338 TSC_hg19_v1_chr16_-_55867027 AB119996 AB119995 BC012418 AK290623 AK292209 NM_001025194 NM_001025195 NM_001266	120658	-	AY907669 BC069548 BC069501 BC117126 BC143692 AK056109 NM_001143685 NM_145024	162857	-	BC039309|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##NM_001172502|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##AK301811|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##NM_001043|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##BC060831|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##NM_001172504|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##AK312793|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##M65105|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##DQ891472|CES1|1066|carboxylesterase 1##DQ894656|CES1|1066|carboxylesterase 1##AK301651|CES1|1066|carboxylesterase 1##AB025026|CES1|1066|carboxylesterase 1##M73499|CES1|1066|carboxylesterase 1##S73751|CES1|1066|carboxylesterase 1##AF177775|CES1|1066|carboxylesterase 1##BC009706|CES1|1066|carboxylesterase 1##AY268104|CES1|1066|carboxylesterase 1##L07764|CES1|1066|carboxylesterase 1##BC110338|CES1|1066|carboxylesterase 1##AB119996|CES1|1066|carboxylesterase 1##AB119995|CES1|1066|carboxylesterase 1##BC012418|CES1|1066|carboxylesterase 1##AK290623|CES1|1066|carboxylesterase 1##AK292209|CES1|1066|carboxylesterase 1##NM_001025194|CES1|1066|carboxylesterase 1##NM_001025195|CES1|1066|carboxylesterase 1##NM_001266|CES1|1066|carboxylesterase 1##AY907669|CES5A|221223|carboxylesterase 5A##BC069548|CES5A|221223|carboxylesterase 5A##BC069501|CES5A|221223|carboxylesterase 5A##BC117126|CES5A|221223|carboxylesterase 5A##BC143692|CES5A|221223|carboxylesterase 5A##AK056109|CES5A|221223|carboxylesterase 5A##NM_001143685|CES5A|221223|carboxylesterase 5A##NM_145024|CES5A|221223|carboxylesterase 5A	0.999891	CTCF.p2:-3:1.000
chr1	25174541	25174683	reg1003875.p1	14.590	+	TSC_hg19_v1_chr1_+_25071976 AF109196 AB463494 AM393644 CU680328 CR533501	-102607	+	TSC_hg19_v1_chr1_+_25071937 AK315051 AK301466 AK307142	-102679	+	NM_013943 TSC_hg19_v1_chr1_+_25071875 AL117424 AK001624 AK095959 BC012444 AF097330	-102781	+	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	81813	-	TSC_hg19_v1_chr1_-_25256761 AK301044	82127	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	82174	-	AF109196|CLIC4|25932|chloride intracellular channel 4##AM393644|CLIC4|25932|chloride intracellular channel 4##CR533501|CLIC4|25932|chloride intracellular channel 4##AK315051|CLIC4|25932|chloride intracellular channel 4##AK301466|CLIC4|25932|chloride intracellular channel 4##AK307142|CLIC4|25932|chloride intracellular channel 4##NM_013943|CLIC4|25932|chloride intracellular channel 4##AL117424|CLIC4|25932|chloride intracellular channel 4##AK001624|CLIC4|25932|chloride intracellular channel 4##AK095959|CLIC4|25932|chloride intracellular channel 4##BC012444|CLIC4|25932|chloride intracellular channel 4##AF097330|CLIC4|25932|chloride intracellular channel 4##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3	0.899409	CTCF.p2:-25:0.899
chr11	848417	848555	reg1004054.p1	14.588	+	NM_001025237	-4041	+	TSC_hg19_v1_chr11_+_844125 BC093031	-4352	+	TSC_hg19_v1_chr11_+_844103 NM_001025234	-4403	+	TSC_hg19_v1_chr11_-_910811 AF212229 AK075413 AK225025 BC095409 AK297743 AK027711	62324	-	AY037151 TSC_hg19_v1_chr11_-_910842 NM_001142674 NM_001142676 NM_001142677 NM_023947	62367	-	NM_001142675	66571	-	NM_001025237|TSPAN4|7106|tetraspanin 4##BC093031|TSPAN4|7106|tetraspanin 4##NM_001025234|TSPAN4|7106|tetraspanin 4##AF212229|CHID1|66005|chitinase domain containing 1##AK075413|CHID1|66005|chitinase domain containing 1##AK225025|CHID1|66005|chitinase domain containing 1##BC095409|CHID1|66005|chitinase domain containing 1##AK297743|CHID1|66005|chitinase domain containing 1##AK027711|CHID1|66005|chitinase domain containing 1##AY037151|CHID1|66005|chitinase domain containing 1##NM_001142674|CHID1|66005|chitinase domain containing 1##NM_001142676|CHID1|66005|chitinase domain containing 1##NM_001142677|CHID1|66005|chitinase domain containing 1##NM_023947|CHID1|66005|chitinase domain containing 1##NM_001142675|CHID1|66005|chitinase domain containing 1	0.0	
chr4	147837755	147837883	reg1001641.p2	14.588	+	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	-277728	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	-394823	-	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	-740952	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	29179	-	NM_001166055 NM_001957 AK315931 TSC_hg19_v1_chr4_+_148402083	564256	+	TSC_hg19_v1_chr4_+_148402117 D90348 S57498 X61950	564304	+	AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29##NM_001166055|EDNRA|1909|endothelin receptor type A##NM_001957|EDNRA|1909|endothelin receptor type A##AK315931|EDNRA|1909|endothelin receptor type A##D90348|EDNRA|1909|endothelin receptor type A##S57498|EDNRA|1909|endothelin receptor type A##X61950|EDNRA|1909|endothelin receptor type A	0.035896	
chr9	123822453	123822582	reg1003732.p1	14.588	+	M57729 BC113738 BC113740 AK310774 AK310780 BC022299 NM_001735	-9973	-	TSC_hg19_v1_chr9_-_123691445 NM_001190945 AK315476	-131057	-	AK090468 NM_005658	-133345	-	TSC_hg19_v1_chr9_+_123837236 AK307387 BC089415	14745	+	TSC_hg19_v1_chr9_-_123837410 AB209031	14913	-	NM_007018 BC137284 BC137286 AF513978	28071	+	M57729|C5|727|complement component 5##BC113738|C5|727|complement component 5##BC113740|C5|727|complement component 5##AK310774|C5|727|complement component 5##AK310780|C5|727|complement component 5##BC022299|C5|727|complement component 5##NM_001735|C5|727|complement component 5##NM_001190945|TRAF1|7185|TNF receptor-associated factor 1##AK315476|TRAF1|7185|TNF receptor-associated factor 1##AK090468|TRAF1|7185|TNF receptor-associated factor 1##NM_005658|TRAF1|7185|TNF receptor-associated factor 1##AK307387|CNTRL|11064|centriolin##BC089415|CNTRL|11064|centriolin##AB209031|C5|727|complement component 5##NM_007018|CNTRL|11064|centriolin##BC137284|CNTRL|11064|centriolin##BC137286|CNTRL|11064|centriolin##AF513978|CNTRL|11064|centriolin	0.973848	CTCF.p2:-7:0.974
chr5	58969387	58969530	reg1003586.p1	14.586	+	U50159 NM_006203 L20970	-87159	-	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	-316715	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	-397528	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	94890	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	94997	-	NM_001104631	220162	-	U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.9945	CTCF.p2:8:0.995
chr22	31957364	31957506	reg1003467.p1	14.585	+	TSC_hg19_v1_chr22_+_31892521 BC110814 AK292408 BC041101	-64889	+	BC129926 BC129945 TSC_hg19_v1_chr22_+_31892499 AK303362 AK293987	-64994	+	TSC_hg19_v1_chr22_+_31892148 AB011114 NM_001007467 NM_014775	-65263	+	BC033613 TSC_hg19_v1_chr22_+_32010180	52731	+	TSC_hg19_v1_chr22_-_32026821 BC001482 NM_014338	69397	-	TSC_hg19_v1_chr22_-_32058202 AB528208 CU013140 CU013428 CR456540 DQ656048	100773	-	BC110814|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK292408|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC041101|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC129926|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC129945|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK303362|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK293987|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AB011114|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##NM_001007467|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##NM_014775|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC033613|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC001482|PISD|23761|phosphatidylserine decarboxylase##NM_014338|PISD|23761|phosphatidylserine decarboxylase##CU013140|PISD|23761|phosphatidylserine decarboxylase##CU013428|PISD|23761|phosphatidylserine decarboxylase##CR456540|PISD|23761|phosphatidylserine decarboxylase	0.15363	
chr3	119400244	119400393	reg1003674.p1	14.585	+	TSC_hg19_v1_chr3_-_119396232 AK312143 BC105280 BC010933 L77701 NM_005694 BC108317	-4072	-	CU692240 AF204173 NM_022135 AK314819 BC044929	-20966	-	NM_001206960 NM_001206961 NM_015900 AK301880 AK222705 AK313519 BC035347 BC047703 U37591 AF035268 AF035269 AB527604 CU690470	-83591	+	TSC_hg19_v1_chr3_+_119421876 AF440403 BC035248 CR749242 NM_033364 AF497717 AK055558 BC126394 AK302699 AK309317 AK294413 AK303997 AK289914 HQ258654	21584	+	AJ009936 AJ009937 NM_003889 NM_033013	99012	+	AF061056 AK310789 AK223456 TSC_hg19_v1_chr3_+_119500896	100564	+	AK312143|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC105280|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC010933|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##L77701|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_005694|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC108317|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##AF204173|POPDC2|64091|popeye domain containing 2##NM_022135|POPDC2|64091|popeye domain containing 2##AK314819|POPDC2|64091|popeye domain containing 2##BC044929|POPDC2|64091|popeye domain containing 2##NM_001206960|PLA1A|51365|phospholipase A1 member A##NM_001206961|PLA1A|51365|phospholipase A1 member A##NM_015900|PLA1A|51365|phospholipase A1 member A##AK301880|PLA1A|51365|phospholipase A1 member A##AK222705|PLA1A|51365|phospholipase A1 member A##AK313519|PLA1A|51365|phospholipase A1 member A##BC035347|PLA1A|51365|phospholipase A1 member A##BC047703|PLA1A|51365|phospholipase A1 member A##U37591|PLA1A|51365|phospholipase A1 member A##AF035268|PLA1A|51365|phospholipase A1 member A##AF035269|PLA1A|51365|phospholipase A1 member A##AF440403|C3orf15|89876|chromosome 3 open reading frame 15##BC035248|C3orf15|89876|chromosome 3 open reading frame 15##CR749242|C3orf15|89876|chromosome 3 open reading frame 15##NM_033364|C3orf15|89876|chromosome 3 open reading frame 15##AF497717|C3orf15|89876|chromosome 3 open reading frame 15##AK055558|C3orf15|89876|chromosome 3 open reading frame 15##BC126394|C3orf15|89876|chromosome 3 open reading frame 15##AK302699|C3orf15|89876|chromosome 3 open reading frame 15##AK309317|C3orf15|89876|chromosome 3 open reading frame 15##AK294413|C3orf15|89876|chromosome 3 open reading frame 15##AK303997|C3orf15|89876|chromosome 3 open reading frame 15##AK289914|C3orf15|89876|chromosome 3 open reading frame 15##HQ258654|C3orf15|89876|chromosome 3 open reading frame 15##AJ009936|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AJ009937|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##NM_003889|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##NM_033013|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AF061056|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AK310789|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AK223456|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2	0.0	
chr14	24483307	24483435	reg1003017.p1	14.584	+	NM_198083 BC101814 BC101812 AK301373 BC000663 BC006125	-25299	+	NM_001193636 NM_001193637 GQ871924 AY616183 AY920361 AY920362 AY943857 BC041992 NM_001193635 GQ871921 GQ871925 GU564234 GU564235	-44173	+	BC062348 BC080582 TSC_hg19_v1_chr14_-_24423358 BX647964	-60020	-	GQ871923 GQ871922 BC171914 BC171918 GQ871926 NM_001082488	22293	+	TSC_hg19_v1_chr14_+_24521201 NM_138360	37805	+	AK314182 BC018046 AB009288 NM_006032 TSC_hg19_v1_chr14_+_24540770 AK294460 AK222675 AL137688	57398	+	NM_198083|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC101814|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC101812|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AK301373|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC000663|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC006125|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##NM_001193636|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##NM_001193637|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##GQ871924|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##AY616183|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AY920361|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AY920362|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AY943857|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##NM_001193635|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##GQ871921|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##GU564234|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##GU564235|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC062348|C14orf167|55449|chromosome 14 open reading frame 167##BC080582|C14orf167|55449|chromosome 14 open reading frame 167##BX647964|C14orf167|55449|chromosome 14 open reading frame 167##GQ871923|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##GQ871922|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##BC171914|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##BC171918|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##NM_001082488|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##NM_138360|LRRC16B|90668|leucine rich repeat containing 16B##AK314182|CPNE6|9362|copine VI (neuronal)##BC018046|CPNE6|9362|copine VI (neuronal)##AB009288|CPNE6|9362|copine VI (neuronal)##NM_006032|CPNE6|9362|copine VI (neuronal)##AK294460|CPNE6|9362|copine VI (neuronal)##AK222675|CPNE6|9362|copine VI (neuronal)##AL137688|CPNE6|9362|copine VI (neuronal)	0.994824	CTCF.p2:-33:0.995
chr6	44623368	44623501	reg1003451.p1	14.583	+	TSC_hg19_v1_chr6_+_44355461 AK128737 AK299738 BC001568 AB007892 AB590067 CU674768 DQ891623 DQ894814 U86753	-267934	+	NM_001253 TSC_hg19_v1_chr6_+_44355294	-268162	+	NM_145026 AK058171	-312994	+	NM_001015051 NM_001024630 AF053952	672622	+	AF073930 NM_003599 TSC_hg19_v1_chr6_-_45345614 AK303838 BC035816 BC050384 NM_181356 AK313874	722241	-	TSC_hg19_v1_chr6_+_45389825 NM_004348	766431	+	AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_001253|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_145026|SPATS1|221409|spermatogenesis associated, serine-rich 1##AK058171|SPATS1|221409|spermatogenesis associated, serine-rich 1##NM_001015051|RUNX2|860|runt-related transcription factor 2##NM_001024630|RUNX2|860|runt-related transcription factor 2##AF053952|RUNX2|860|runt-related transcription factor 2##AF073930|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_003599|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK303838|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC035816|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC050384|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_181356|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK313874|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_004348|RUNX2|860|runt-related transcription factor 2	0.990365	CTCF.p2:-8:0.990
chr11	44915827	44915931	reg1001581.p1	14.582	+	NM_130783	-129904	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-328652	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-328714	+	TSC_hg19_v1_chr11_-_44956087 AF010315	40228	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	56538	-	AF275818 NM_020229	199684	+	NM_130783|TSPAN18|90139|tetraspanin 18##AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11	0.996449	CTCF.p2:15:0.996
chr17	7259444	7259578	reg1003700.p1	14.582	+	BC040900 AY358218 BC107110 NM_198154	-1036	+	TSC_hg19_v1_chr17_+_7255480 AK056227 AY646650	-3969	+	BC103744 NM_001002914	-4304	+	NM_001251902 NM_003985 AK311063 AK225403 AK310684 U43408	24839	+	AK124006 AF289602 BC028080 TSC_hg19_v1_chr17_-_7297842 AK098229 AK075188 AK314643 BC093026 AF159442	38346	-	BC014989 NM_001201576 NM_020360	38649	-	BC040900|TMEM95|339168|transmembrane protein 95##AY358218|TMEM95|339168|transmembrane protein 95##BC107110|TMEM95|339168|transmembrane protein 95##NM_198154|TMEM95|339168|transmembrane protein 95##AK056227|KCTD11|147040|potassium channel tetramerisation domain containing 11##AY646650|KCTD11|147040|potassium channel tetramerisation domain containing 11##BC103744|KCTD11|147040|potassium channel tetramerisation domain containing 11##NM_001002914|KCTD11|147040|potassium channel tetramerisation domain containing 11##NM_001251902|TNK1|8711|tyrosine kinase, non-receptor, 1##NM_003985|TNK1|8711|tyrosine kinase, non-receptor, 1##AK311063|TNK1|8711|tyrosine kinase, non-receptor, 1##AK225403|TNK1|8711|tyrosine kinase, non-receptor, 1##AK310684|TNK1|8711|tyrosine kinase, non-receptor, 1##U43408|TNK1|8711|tyrosine kinase, non-receptor, 1##AK124006|PLSCR3|57048|phospholipid scramblase 3##AF289602|PLSCR3|57048|phospholipid scramblase 3##BC028080|PLSCR3|57048|phospholipid scramblase 3##AK098229|PLSCR3|57048|phospholipid scramblase 3##AK075188|PLSCR3|57048|phospholipid scramblase 3##AK314643|PLSCR3|57048|phospholipid scramblase 3##BC093026|PLSCR3|57048|phospholipid scramblase 3##AF159442|PLSCR3|57048|phospholipid scramblase 3##NM_001201576|PLSCR3|57048|phospholipid scramblase 3##NM_020360|PLSCR3|57048|phospholipid scramblase 3	0.996154	CTCF.p2:3:0.996
chr1	160800451	160800581	reg1003195.p1	14.581	+	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	-34518	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-91452	+	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	-118930	-	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	32062	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	54442	-	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	124043	-	NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2	0.895076	CTCF.p2:15:0.895
chr6	158177804	158177928	reg1001973.p1	14.581	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-375327	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-432649	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-433282	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	66423	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	66508	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	225021	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.999306	CTCF.p2:-11:0.999
chr17	75327617	75327763	reg1003494.p1	14.580	+	BC021192 TSC_hg19_v1_chr17_+_75316374 BT007215 CU676864 DQ890623 DQ893792	-11300	+	TSC_hg19_v1_chr17_+_75316065 AF142408	-11587	+	TSC_hg19_v1_chr17_+_75315642 AF123052	-12041	+	TSC_hg19_v1_chr17_+_75369236 AJ312319 NM_001113493	41563	+	TSC_hg19_v1_chr17_+_75369418 AK304143	41735	+	AB023208 NM_001113494 AJ312322	44479	+	BC021192|SEPT9|10801|septin 9##BT007215|SEPT9|10801|septin 9##DQ890623|SEPT9|10801|septin 9##DQ893792|SEPT9|10801|septin 9##AF142408|SEPT9|10801|septin 9##AF123052|SEPT9|10801|septin 9##AJ312319|SEPT9|10801|septin 9##NM_001113493|SEPT9|10801|septin 9##AK304143|SEPT9|10801|septin 9##AB023208|SEPT9|10801|septin 9##NM_001113494|SEPT9|10801|septin 9##AJ312322|SEPT9|10801|septin 9	0.998266	CTCF.p2:-19:0.998
chr5	150880393	150880525	reg1003686.p1	14.579	+	TSC_hg19_v1_chr5_+_150827239 AY162213 BC136437 BC136438	-53215	+	AK309323 TSC_hg19_v1_chr5_+_150827187	-53270	+	TSC_hg19_v1_chr5_+_150827163 NM_078483 BX537963 AY227111	-53299	+	AF231022 NM_001447	68045	-	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	186002	-	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	186049	-	AY162213|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136437|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136438|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AK309323|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##NM_078483|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BX537963|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AY227111|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)	0.990268	CTCF.p2:10:0.990
chr6	37178341	37178457	reg1002831.p1	14.576	+	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	-40277	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-204898	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-224129	-	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	46987	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	47200	+	TSC_hg19_v1_chr6_-_37225916 BC009625 NM_001162900	47528	-	NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B##BC009625|TMEM217|221468|transmembrane protein 217##NM_001162900|TMEM217|221468|transmembrane protein 217	0.999262	CTCF.p2:3:0.999
chr22	30401343	30401470	reg1003536.p1	14.575	+	BC142713 TSC_hg19_v1_chr22_+_30279201 AB002369 BC152455	-122145	+	TSC_hg19_v1_chr22_+_30279167 BC151217 AK289581 NM_021090 NM_153050 NM_153051	-122277	+	BC025368 TSC_hg19_v1_chr22_-_30234264 AK303257 NM_001242906 NM_032204	-167134	-	BC030013 NM_152510	75046	+	AB527710 X13967 BC093733 BC093735 BC143305 BC069540 TSC_hg19_v1_chr22_-_30642749 AK315310 NM_002309	241333	-	CR541703 AB463155 CU013134 CU013422 DQ892537 DQ895748 CR456534 BC011589 NM_020530 TSC_hg19_v1_chr22_-_30662841	261409	-	BC142713|MTMR3|8897|myotubularin related protein 3##AB002369|MTMR3|8897|myotubularin related protein 3##BC152455|MTMR3|8897|myotubularin related protein 3##BC151217|MTMR3|8897|myotubularin related protein 3##AK289581|MTMR3|8897|myotubularin related protein 3##NM_021090|MTMR3|8897|myotubularin related protein 3##NM_153050|MTMR3|8897|myotubularin related protein 3##NM_153051|MTMR3|8897|myotubularin related protein 3##BC025368|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##AK303257|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##NM_001242906|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##NM_032204|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##BC030013|HORMAD2|150280|HORMA domain containing 2##NM_152510|HORMAD2|150280|HORMA domain containing 2##X13967|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093733|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093735|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC143305|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC069540|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AK315310|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##NM_002309|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##CR541703|OSM|5008|oncostatin M##CU013134|OSM|5008|oncostatin M##CU013422|OSM|5008|oncostatin M##DQ892537|OSM|5008|oncostatin M##DQ895748|OSM|5008|oncostatin M##CR456534|OSM|5008|oncostatin M##BC011589|OSM|5008|oncostatin M##NM_020530|OSM|5008|oncostatin M	0.545701	CTCF.p2:2:0.546
chr8	41692343	41692474	reg1002328.p1	14.575	+	AK026601 TSC_hg19_v1_chr8_+_41685847	-6583	+	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	-37268	-	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	-169645	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	61902	-	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	217091	-	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	318125	+	M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic##AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit	0.079855	
chr15	41196343	41196448	reg1002375.p2	14.571	+	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	-9695	+	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	-29948	-	TSC_hg19_v1_chr15_+_41136676 NM_001032367 AK303899 BC004140 BT007425 CU676280 DQ890747 DQ892293 DQ895493	-59694	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	25303	+	NM_001142776 NM_024111 TSC_hg19_v1_chr15_+_41245671 BC019625 BC001683 BC001847 AY702027	49309	+	TSC_hg19_v1_chr15_-_41364176 AK057582	167809	-	AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)##NM_001142776|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##NM_024111|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC019625|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001683|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001847|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AY702027|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AK057582|INO80|54617|INO80 homolog (S. cerevisiae)	0.998359	CTCF.p2:-4:0.998
chr13	106736115	106736231	reg1002475.p1	14.570	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-617582	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	-617869	+	NM_000452 U10417	-3016978	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	451176	-	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	484312	-	NM_001080396	1783286	-	NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A	0.261355	CTCF.p2:-12:0.261
chr19	54992615	54992749	reg1001807.p1	14.570	+	BC065910 TSC_hg19_v1_chr19_-_54984370 BC024327 NM_145057	-8301	-	BC015921 NM_198988	-17789	-	AL833879 TSC_hg19_v1_chr19_+_54965768	-26970	+	NM_002288 NM_021270 BC057790 AF013250 BC069366 CU686777 HQ448404 EF174570	21391	+	AK310088 TSC_hg19_v1_chr19_+_55084486	91803	+	TSC_hg19_v1_chr19_+_55085256 NM_001130917 NM_006866 U82275 AK130170	92570	+	BC065910|CDC42EP5|148170|CDC42 effector protein (Rho GTPase binding) 5##BC024327|CDC42EP5|148170|CDC42 effector protein (Rho GTPase binding) 5##NM_145057|CDC42EP5|148170|CDC42 effector protein (Rho GTPase binding) 5##BC015921|LENG9|94059|leukocyte receptor cluster (LRC) member 9##NM_198988|LENG9|94059|leukocyte receptor cluster (LRC) member 9##NM_002288|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##NM_021270|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##BC057790|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##AF013250|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##BC069366|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##HQ448404|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##EF174570|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##AK310088|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_001130917|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_006866|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82275|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AK130170|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2	0.996776	CTCF.p2:-33:0.997
chr5	133625333	133625457	reg1003071.p1	14.570	+	TSC_hg19_v1_chr5_-_133561906 NM_002715	-63492	-	TSC_hg19_v1_chr5_-_133561763 BC000400 BC002657 BC019275 BC031696 AK057424 AK097599	-63640	-	AB451240 AB451365 CR457417 AB385080 X12646 TSC_hg19_v1_chr5_-_133561733 J03804	-63751	-	BC041799 NM_001113575 NM_016508 TSC_hg19_v1_chr5_-_133702854	77419	-	TSC_hg19_v1_chr5_-_133706735 AK301802 AK294740 AK294559 AK299305 AK297586 AK310955	81334	-	M74525 NM_003337 TSC_hg19_v1_chr5_+_133706874	81479	+	NM_002715|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC000400|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC002657|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC019275|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC031696|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AK057424|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AK097599|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AB451240|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AB451365|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##CR457417|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##X12646|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##J03804|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC041799|CDKL3|51265|cyclin-dependent kinase-like 3##NM_001113575|CDKL3|51265|cyclin-dependent kinase-like 3##NM_016508|CDKL3|51265|cyclin-dependent kinase-like 3##AK301802|CDKL3|51265|cyclin-dependent kinase-like 3##AK294740|CDKL3|51265|cyclin-dependent kinase-like 3##AK294559|CDKL3|51265|cyclin-dependent kinase-like 3##AK299305|CDKL3|51265|cyclin-dependent kinase-like 3##AK297586|CDKL3|51265|cyclin-dependent kinase-like 3##AK310955|CDKL3|51265|cyclin-dependent kinase-like 3##M74525|UBE2B|7320|ubiquitin-conjugating enzyme E2B##NM_003337|UBE2B|7320|ubiquitin-conjugating enzyme E2B	0.889803	CTCF.p2:20:0.890
chr22	45216616	45216754	reg1003974.p1	14.569	+	AK001306 NM_001017526 NM_001198726 NM_181335 BC059382 BC067824 BC048280	-68224	+	AK291564 TSC_hg19_v1_chr22_+_45098246 AF177331 AL355192 NM_181334	-118432	+	TSC_hg19_v1_chr22_+_45098090 NM_181333	-118617	+	TSC_hg19_v1_chr22_-_45404785 AK299836 AK297317 AK091480 AX747013 NM_001242450	188144	-	AB489146 CU012999 CU013287 CU680262 CR456448 BC012187 NM_138415	188819	-	TSC_hg19_v1_chr22_-_45405781 AK092243 AX747427 NM_001135862	189109	-	AK001306|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001017526|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001198726|ARHGAP8|23779|Rho GTPase activating protein 8##NM_181335|ARHGAP8|23779|Rho GTPase activating protein 8##BC059382|ARHGAP8|23779|Rho GTPase activating protein 8##BC067824|ARHGAP8|23779|Rho GTPase activating protein 8##BC048280|ARHGAP8|23779|Rho GTPase activating protein 8##AK291564|PRR5|55615|proline rich 5 (renal)##AF177331|PRR5|55615|proline rich 5 (renal)##AL355192|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181334|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181333|PRR5|55615|proline rich 5 (renal)##AK299836|PHF21B|112885|PHD finger protein 21B##AK297317|PHF21B|112885|PHD finger protein 21B##AK091480|PHF21B|112885|PHD finger protein 21B##NM_001242450|PHF21B|112885|PHD finger protein 21B##CU012999|PHF21B|112885|PHD finger protein 21B##CU013287|PHF21B|112885|PHD finger protein 21B##CR456448|PHF21B|112885|PHD finger protein 21B##BC012187|PHF21B|112885|PHD finger protein 21B##NM_138415|PHF21B|112885|PHD finger protein 21B##AK092243|PHF21B|112885|PHD finger protein 21B##NM_001135862|PHF21B|112885|PHD finger protein 21B	0.993815	CTCF.p2:-7:0.994
chr1	112024391	112024525	reg1003799.p1	14.568	+	TSC_hg19_v1_chr1_+_112016601 BC017973 NM_174896	-7860	+	TSC_hg19_v1_chr1_+_111992132 X60221	-32304	+	BC005960 TSC_hg19_v1_chr1_+_111992113 AY871272 AK313541 AK223018	-32342	+	NM_000677 NM_020683	22284	-	BC041707 BC064411 NM_001081976	82121	-	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	138009	+	BC017973|C1orf162|128346|chromosome 1 open reading frame 162##NM_174896|C1orf162|128346|chromosome 1 open reading frame 162##X60221|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1##BC005960|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1##AY871272|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1##AK313541|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1##AK223018|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1##NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family	0.0	
chr15	98452656	98452795	reg1003882.p1	14.568	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	-1126053	+	NM_001145157	-1576157	+	AK316086 NM_001145156	-1576932	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	51194	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	51226	+	AK097062 AK097062 NM_182562	604885	-	AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B	0.455548	CTCF.p2:-4:0.456
chr12	111332305	111332421	reg1001961.p1	14.567	+	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-47560	+	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	-151607	-	TSC_hg19_v1_chr12_-_111180641 X74008 BC014073	-151707	-	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	26015	-	BC151245 NM_015267 AB006631 AF271236	139509	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	474483	-	AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##X74008|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC014073|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A	0.98785	CTCF.p2:-5:0.977
chr13	24794372	24794508	reg1003439.p1	14.566	+	TSC_hg19_v1_chr13_+_24734858 AK092754 AX747708 NM_001166271 NM_153023 AK055770	-59545	+	TSC_hg19_v1_chr13_+_24553943 BX648244 BC043582	-240507	+	BX648445 TSC_hg19_v1_chr13_+_24553892	-240575	+	AK299981 AK301149 TSC_hg19_v1_chr13_+_24825840	31395	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	50458	+	BC040438 NM_178540 AY358145	89277	+	AK092754|SPATA13|221178|spermatogenesis associated 13##NM_001166271|SPATA13|221178|spermatogenesis associated 13##NM_153023|SPATA13|221178|spermatogenesis associated 13##AK055770|SPATA13|221178|spermatogenesis associated 13##BX648244|SPATA13|221178|spermatogenesis associated 13##AK299981|SPATA13|221178|spermatogenesis associated 13##AK301149|SPATA13|221178|spermatogenesis associated 13##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9	0.999316	CTCF.p2:5:0.999
chr8	105772045	105772160	reg1003044.p1	14.566	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-170855	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-170927	-	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	-292887	-	AF119334 BC109222 BC109223 NM_012082	559044	+	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	1510321	+	AK296561 NM_001198532	1688049	+	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1	1.126313	CTCF.p2:7:0.906	CTCF.p2:-21:0.220
chr1	156829999	156830116	reg1002220.p2	14.565	+	AF064078 AK310760 NM_014215	-1369	-	AB528908 EU832614 EU832686 AF097744 AK222737 AY763100 AF051325 AJ000553 AY763099 BC012107 AK313706 NM_001161441 NM_001161442 NM_001161444 NM_003975	-43488	-	AY763098 NM_001161443	-44119	-	M23102 TSC_hg19_v1_chr1_+_156830655 BC136554 BC144239 NM_001012331 NM_002529 AK290759 AK312704 BC062580	609	+	NM_001080471	33465	+	AK292342 NM_144702 BC033790	60375	+	AF064078|INSRR|3645|insulin receptor-related receptor##AK310760|INSRR|3645|insulin receptor-related receptor##NM_014215|INSRR|3645|insulin receptor-related receptor##EU832614|SH2D2A|9047|SH2 domain containing 2A##EU832686|SH2D2A|9047|SH2 domain containing 2A##AF097744|SH2D2A|9047|SH2 domain containing 2A##AK222737|SH2D2A|9047|SH2 domain containing 2A##AY763100|SH2D2A|9047|SH2 domain containing 2A##AF051325|SH2D2A|9047|SH2 domain containing 2A##AJ000553|SH2D2A|9047|SH2 domain containing 2A##AY763099|SH2D2A|9047|SH2 domain containing 2A##BC012107|SH2D2A|9047|SH2 domain containing 2A##AK313706|SH2D2A|9047|SH2 domain containing 2A##NM_001161441|SH2D2A|9047|SH2 domain containing 2A##NM_001161442|SH2D2A|9047|SH2 domain containing 2A##NM_001161444|SH2D2A|9047|SH2 domain containing 2A##NM_003975|SH2D2A|9047|SH2 domain containing 2A##AY763098|SH2D2A|9047|SH2 domain containing 2A##NM_001161443|SH2D2A|9047|SH2 domain containing 2A##M23102|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC136554|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC144239|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001012331|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_002529|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK290759|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK312704|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC062580|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001080471|PEAR1|375033|platelet endothelial aggregation receptor 1##AK292342|LRRC71|149499|leucine rich repeat containing 71##NM_144702|LRRC71|149499|leucine rich repeat containing 71##BC033790|LRRC71|149499|leucine rich repeat containing 71	0.487016	CTCF.p2:1:0.487
chr2	222438336	222438476	reg1003818.p1	14.565	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	-1396	-	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-1946052	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-1975817	+	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	720614	-	AK057009 NM_153038 BC109388	724506	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	725119	-	BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140##EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3	0.985431	CTCF.p2:11:0.985
chr2	109200518	109200634	reg1001609.p1	14.562	+	TSC_hg19_v1_chr2_+_109150925 AK314217	-49633	+	TSC_hg19_v1_chr2_+_109150916 NM_001193483 AK296992 AF527761	-49711	+	TSC_hg19_v1_chr2_-_109150636 BC004487 AK095987	-49931	-	TSC_hg19_v1_chr2_+_109204761 NM_004987 U09284	4180	+	TSC_hg19_v1_chr2_+_109204792 AF527763	4209	+	TSC_hg19_v1_chr2_+_109204921 BC005341 NM_001193488	4393	+	AK314217|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193483|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK296992|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527761|LIMS1|3987|LIM and senescent cell antigen-like domains 1##BC004487|FLJ38668|644903|uncharacterized LOC644903##AK095987|FLJ38668|644903|uncharacterized LOC644903##NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1##U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1##BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1	0.987354	CTCF.p2:4:0.987
chr5	76856639	76856766	reg1002222.p1	14.562	+	TSC_hg19_v1_chr5_-_76788333 AK001766 BC001807 NM_018268	-68387	-	AK296423 AK300058 TSC_hg19_v1_chr5_-_76788142 AK021855	-68557	-	TSC_hg19_v1_chr5_-_76788048 AK293316 AK295249 CU691838 AK304329 AK023977 AF115511 BC040241	-68636	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	77727	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	77812	-	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	215430	-	AK001766|WDR41|55255|WD repeat domain 41##BC001807|WDR41|55255|WD repeat domain 41##NM_018268|WDR41|55255|WD repeat domain 41##AK296423|WDR41|55255|WD repeat domain 41##AK300058|WDR41|55255|WD repeat domain 41##AK021855|WDR41|55255|WD repeat domain 41##AK293316|WDR41|55255|WD repeat domain 41##AK295249|WDR41|55255|WD repeat domain 41##AK304329|WDR41|55255|WD repeat domain 41##AK023977|WDR41|55255|WD repeat domain 41##AF115511|WDR41|55255|WD repeat domain 41##BC040241|WDR41|55255|WD repeat domain 41##EU446696|OTP|23440|orthopedia homeobox##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A	0.989951	CTCF.p2:-17:0.990
chr17	35405046	35405192	reg1003819.p1	14.559	+	AK057229 NM_012138 TSC_hg19_v1_chr17_+_35306253 AF083208 BC000591 AJ249940 AB385572 CU674286 DQ892097 DQ895290	-98820	+	BC020470 NM_005568	-110348	+	BC084573 TSC_hg19_v1_chr17_-_35293961	-111179	-	AY315619 AY315620 NM_198837 NM_198838	251572	-	TSC_hg19_v1_chr17_-_35716040 AB371587 AK309084 AY315621 AY315622 NM_198836	310933	-	AK096966 BC034672 NM_173625 CU689930	327861	+	AK057229|AATF|26574|apoptosis antagonizing transcription factor##NM_012138|AATF|26574|apoptosis antagonizing transcription factor##AF083208|AATF|26574|apoptosis antagonizing transcription factor##BC000591|AATF|26574|apoptosis antagonizing transcription factor##AJ249940|AATF|26574|apoptosis antagonizing transcription factor##DQ892097|AATF|26574|apoptosis antagonizing transcription factor##DQ895290|AATF|26574|apoptosis antagonizing transcription factor##BC020470|LHX1|3975|LIM homeobox 1##NM_005568|LHX1|3975|LIM homeobox 1##AY315619|ACACA|31|acetyl-CoA carboxylase alpha##AY315620|ACACA|31|acetyl-CoA carboxylase alpha##NM_198837|ACACA|31|acetyl-CoA carboxylase alpha##NM_198838|ACACA|31|acetyl-CoA carboxylase alpha##AB371587|ACACA|31|acetyl-CoA carboxylase alpha##AK309084|ACACA|31|acetyl-CoA carboxylase alpha##AY315621|ACACA|31|acetyl-CoA carboxylase alpha##AY315622|ACACA|31|acetyl-CoA carboxylase alpha##NM_198836|ACACA|31|acetyl-CoA carboxylase alpha##AK096966|C17orf78|284099|chromosome 17 open reading frame 78##BC034672|C17orf78|284099|chromosome 17 open reading frame 78##NM_173625|C17orf78|284099|chromosome 17 open reading frame 78	0.99956	CTCF.p2:14:1.000
chr11	75039883	75040005	reg1002154.p1	14.558	+	NM_001195528	-87995	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	-169103	+	NM_001145212 NM_007256 FM209050 TSC_hg19_v1_chr11_+_74862151 AK304783 AK302492 AK290234 AK300134 AB020687 BC127254 BC041095 AB026256 AL117465	-177800	+	AF084040 AF084940 FJ348262 CU678548 AB462955 TSC_hg19_v1_chr11_-_75062708 AK289718 BC003636 NM_004041 NM_020251	22872	-	TSC_hg19_v1_chr11_+_75110562 D28344 AK130960 BC034149 NM_001005 AK129794 AK313051 BC013231 BC100284 X55715 BC071917 AK223048 BC003137 BC071669 S42658 AB464166 CU678394 DQ892888 DQ896136 U14990 U14991 U14992 BC003577 BC013196 AB062288	70631	+	HQ258227 BC132708 BC132710 TSC_hg19_v1_chr11_-_75141083 AK091109 AX746783	101116	-	NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145212|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_007256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209050|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK304783|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK302492|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK290234|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK300134|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB020687|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC127254|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC041095|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB026256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AL117465|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF084040|ARRB1|408|arrestin, beta 1##AF084940|ARRB1|408|arrestin, beta 1##FJ348262|ARRB1|408|arrestin, beta 1##AK289718|ARRB1|408|arrestin, beta 1##BC003636|ARRB1|408|arrestin, beta 1##NM_004041|ARRB1|408|arrestin, beta 1##NM_020251|ARRB1|408|arrestin, beta 1##D28344|RPS3|6188|ribosomal protein S3##AK130960|RPS3|6188|ribosomal protein S3##BC034149|RPS3|6188|ribosomal protein S3##NM_001005|RPS3|6188|ribosomal protein S3##AK129794|RPS3|6188|ribosomal protein S3##AK313051|RPS3|6188|ribosomal protein S3##BC013231|RPS3|6188|ribosomal protein S3##BC100284|RPS3|6188|ribosomal protein S3##X55715|RPS3|6188|ribosomal protein S3##BC071917|RPS3|6188|ribosomal protein S3##AK223048|RPS3|6188|ribosomal protein S3##BC003137|RPS3|6188|ribosomal protein S3##BC071669|RPS3|6188|ribosomal protein S3##S42658|RPS3|6188|ribosomal protein S3##DQ892888|RPS3|6188|ribosomal protein S3##DQ896136|RPS3|6188|ribosomal protein S3##U14990|RPS3|6188|ribosomal protein S3##U14991|RPS3|6188|ribosomal protein S3##U14992|RPS3|6188|ribosomal protein S3##BC003577|RPS3|6188|ribosomal protein S3##BC013196|RPS3|6188|ribosomal protein S3##AB062288|RPS3|6188|ribosomal protein S3##HQ258227|KLHL35|283212|kelch-like 35 (Drosophila)##BC132708|KLHL35|283212|kelch-like 35 (Drosophila)##BC132710|KLHL35|283212|kelch-like 35 (Drosophila)##AK091109|KLHL35|283212|kelch-like 35 (Drosophila)	0.893254	CTCF.p2:-19:0.893
chr8	22480512	22480641	reg1002520.p2	14.558	+	TSC_hg19_v1_chr8_+_22462537 NM_021174 AL834162 AL834351 AL834352	-18035	+	BC065495 TSC_hg19_v1_chr8_+_22462287 AK095712	-18266	+	TSC_hg19_v1_chr8_+_22462275 BX640952	-18300	+	TSC_hg19_v1_chr8_-_22526609 BC009824 AK023980 AF271732 AK001289 AK222470 NM_018688	46044	-	AK295134 NM_001199880	69325	-	AK294968 AK295834 NM_001199881	69498	-	NM_021174|KIAA1967|57805|KIAA1967##AL834162|KIAA1967|57805|KIAA1967##AL834351|KIAA1967|57805|KIAA1967##AL834352|KIAA1967|57805|KIAA1967##BC065495|KIAA1967|57805|KIAA1967##AK095712|KIAA1967|57805|KIAA1967##BX640952|KIAA1967|57805|KIAA1967##BC009824|BIN3|55909|bridging integrator 3##AK023980|BIN3|55909|bridging integrator 3##AF271732|BIN3|55909|bridging integrator 3##AK001289|BIN3|55909|bridging integrator 3##AK222470|BIN3|55909|bridging integrator 3##NM_018688|BIN3|55909|bridging integrator 3##AK295134|EGR3|1960|early growth response 3##NM_001199880|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3	0.995869	CTCF.p2:-15:0.996
chr6	138910083	138910211	reg1002899.p1	14.557	+	TSC_hg19_v1_chr6_-_138893682 NM_020464	-16439	-	TSC_hg19_v1_chr6_-_138820580 AK092744 AX747703	-89531	-	AK307584 NM_001144060 TSC_hg19_v1_chr6_-_138820579	-89569	-	TSC_hg19_v1_chr6_+_139013613 AK128874	103466	+	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	184643	+	AK092592 AX747618 NM_001242740	184654	-	NM_020464|NHSL1|57224|NHS-like 1##AK307584|NHSL1|57224|NHS-like 1##NM_001144060|NHSL1|57224|NHS-like 1##AK128874|FLJ46906|441172|uncharacterized LOC441172##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A##AK092592|LOC100507462|100507462|uncharacterized LOC100507462##NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462	0.999636	CTCF.p2:-20:1.000
chr11	3585778	3585870	reg1002647.p1	14.554	+	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	-185445	-	AK293940 NM_001039165	-332209	-	AB529240 AY255583 NM_001164377	-345782	-	NM_053017 NM_001079536 Y16835	77690	-	BC017828 BC069102 NM_004314 S74683 BC111729	80546	+	AB528800 AJ278118 AJ295237 BC136250 BC143303 AF199235 NM_020402	106754	-	BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195##AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##NM_053017|ART5|116969|ADP-ribosyltransferase 5##NM_001079536|ART5|116969|ADP-ribosyltransferase 5##Y16835|ART5|116969|ADP-ribosyltransferase 5##BC017828|ART1|417|ADP-ribosyltransferase 1##BC069102|ART1|417|ADP-ribosyltransferase 1##NM_004314|ART1|417|ADP-ribosyltransferase 1##S74683|ART1|417|ADP-ribosyltransferase 1##BC111729|ART1|417|ADP-ribosyltransferase 1##AJ278118|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AJ295237|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC136250|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC143303|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AF199235|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##NM_020402|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10	0.0	
chr12	10902845	10902990	reg1002661.p2	14.554	+	TSC_hg19_v1_chr12_-_10875923 X95325 BC015913 BC015564 BC021926 BC009744 M24069 BC008801 X72712 AK314846 NM_001145426 NM_003651	-27016	-	TSC_hg19_v1_chr12_-_10875782 AB463536 DQ892686 DQ895930	-27175	-	AF251059 NM_018423	-76027	-	BC069091 AB529261 BC093992 BC113561 NM_023919	52279	-	BC069084 BC069551 BC096701 BC096735 BC098167 BC098353 NM_023918 AB529262 CU686904	56661	-	BC069066 AB529263 BC095519 NM_023917	59802	-	X95325|CSDA|8531|cold shock domain protein A##BC015913|CSDA|8531|cold shock domain protein A##BC015564|CSDA|8531|cold shock domain protein A##BC021926|CSDA|8531|cold shock domain protein A##BC009744|CSDA|8531|cold shock domain protein A##M24069|CSDA|8531|cold shock domain protein A##BC008801|CSDA|8531|cold shock domain protein A##X72712|CSDA|8531|cold shock domain protein A##AK314846|CSDA|8531|cold shock domain protein A##NM_001145426|CSDA|8531|cold shock domain protein A##NM_003651|CSDA|8531|cold shock domain protein A##DQ892686|CSDA|8531|cold shock domain protein A##DQ895930|CSDA|8531|cold shock domain protein A##AF251059|STYK1|55359|serine/threonine/tyrosine kinase 1##NM_018423|STYK1|55359|serine/threonine/tyrosine kinase 1##BC069091|TAS2R7|50837|taste receptor, type 2, member 7##BC093992|TAS2R7|50837|taste receptor, type 2, member 7##BC113561|TAS2R7|50837|taste receptor, type 2, member 7##NM_023919|TAS2R7|50837|taste receptor, type 2, member 7##BC069084|TAS2R8|50836|taste receptor, type 2, member 8##BC069551|TAS2R8|50836|taste receptor, type 2, member 8##BC096701|TAS2R8|50836|taste receptor, type 2, member 8##BC096735|TAS2R8|50836|taste receptor, type 2, member 8##BC098167|TAS2R8|50836|taste receptor, type 2, member 8##BC098353|TAS2R8|50836|taste receptor, type 2, member 8##NM_023918|TAS2R8|50836|taste receptor, type 2, member 8##BC069066|TAS2R9|50835|taste receptor, type 2, member 9##BC095519|TAS2R9|50835|taste receptor, type 2, member 9##NM_023917|TAS2R9|50835|taste receptor, type 2, member 9	0.357648	CTCF.p2:-32:0.217
chr17	47512542	47512668	reg1003907.p1	14.554	+	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	-20357	-	BC095460 TSC_hg19_v1_chr17_-_47492215	-20390	-	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	-73025	-	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	60083	+	TSC_hg19_v1_chr17_+_47653192 AL834282 NM_007225	140631	+	TSC_hg19_v1_chr17_+_47653475 BC022541 AK308928 AY358526 AB385434	140922	+	S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##BC095460|PHB|5245|prohibitin##CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor##AL834282|NXPH3|11248|neurexophilin 3##NM_007225|NXPH3|11248|neurexophilin 3##BC022541|NXPH3|11248|neurexophilin 3##AK308928|NXPH3|11248|neurexophilin 3##AY358526|NXPH3|11248|neurexophilin 3	0.193919	
chr6	16128998	16129147	reg1002696.p2	14.554	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-465782	-	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	-465895	-	TSC_hg19_v1_chr6_+_15249113 AK303610	-879959	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	230	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	365	+	TSC_hg19_v1_chr6_+_16143281 AK026739	14238	+	NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein	0.01972	
chr14	79033033	79033158	reg1002547.p2	14.553	+	AB018286 BC152457 NM_004796	-163003	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-766645	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-805586	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	712609	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	1644809	-	AK292210 NM_000793	1664301	-	AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	0.999235	CTCF.p2:0:0.999
chr5	61519321	61519465	reg1004221.p1	14.553	+	AK094862 NM_173667	-585758	+	TSC_hg19_v1_chr5_+_60628085 NM_020928	-891295	+	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	-1061126	-	TSC_hg19_v1_chr5_+_61601970 NM_001098511 NM_001243952 NM_001243953 NM_004520	82580	+	TSC_hg19_v1_chr5_+_61602066 BC047544	82689	+	TSC_hg19_v1_chr5_+_61602278 AK297347 AK307880 EF560716 EF560728 EU832810 GQ129246 AK315866	82877	+	AK094862|C5orf64|285668|chromosome 5 open reading frame 64##NM_173667|C5orf64|285668|chromosome 5 open reading frame 64##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6##BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##NM_001098511|KIF2A|3796|kinesin heavy chain member 2A##NM_001243952|KIF2A|3796|kinesin heavy chain member 2A##NM_001243953|KIF2A|3796|kinesin heavy chain member 2A##NM_004520|KIF2A|3796|kinesin heavy chain member 2A##BC047544|KIF2A|3796|kinesin heavy chain member 2A##AK297347|KIF2A|3796|kinesin heavy chain member 2A##AK307880|KIF2A|3796|kinesin heavy chain member 2A##EF560716|KIF2A|3796|kinesin heavy chain member 2A##EF560728|KIF2A|3796|kinesin heavy chain member 2A##EU832810|KIF2A|3796|kinesin heavy chain member 2A##GQ129246|KIF2A|3796|kinesin heavy chain member 2A##AK315866|KIF2A|3796|kinesin heavy chain member 2A	0.980009	CTCF.p2:-2:0.980
chr6	151335586	151335717	reg1002491.p1	14.553	+	TSC_hg19_v1_chr6_+_151187310 AK315378 NM_001242768	-148262	+	TSC_hg19_v1_chr6_+_151187064 AL117452	-148550	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	-148730	+	TSC_hg19_v1_chr6_+_151561133 BC047728 NM_005100	225463	+	U81607 TSC_hg19_v1_chr6_+_151561544 AB210003 BC046095 AK307578	225877	+	TSC_hg19_v1_chr6_+_151561578 BC006094	225930	+	AK315378|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242768|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AL117452|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC047728|AKAP12|9590|A kinase (PRKA) anchor protein 12##NM_005100|AKAP12|9590|A kinase (PRKA) anchor protein 12##U81607|AKAP12|9590|A kinase (PRKA) anchor protein 12##AB210003|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC046095|AKAP12|9590|A kinase (PRKA) anchor protein 12##AK307578|AKAP12|9590|A kinase (PRKA) anchor protein 12	0.407627	CTCF.p2:9:0.408
chr11	1536831	1536948	reg1001614.p1	14.552	+	AB066564 NM_001172223 AK296658	-28997	-	TSC_hg19_v1_chr11_+_1463679 AK074411 AK297306	-73173	+	TSC_hg19_v1_chr11_+_1411225 AY166857 NM_003957 AF533876 AF533877 AF533878 AF533879 AF533880	-125694	+	NM_004420 U27193 TSC_hg19_v1_chr11_-_1593332	56352	-	AB528866 AB126070 NM_001005922	69607	-	AB528163 BC132882 BC132908 AJ628245 NM_001004325 AB126071	82617	-	AB066564|MOB2|81532|MOB kinase activator 2##NM_001172223|MOB2|81532|MOB kinase activator 2##AK296658|MOB2|81532|MOB kinase activator 2##AK074411|BRSK2|9024|BR serine/threonine kinase 2##AK297306|BRSK2|9024|BR serine/threonine kinase 2##AY166857|BRSK2|9024|BR serine/threonine kinase 2##NM_003957|BRSK2|9024|BR serine/threonine kinase 2##AF533876|BRSK2|9024|BR serine/threonine kinase 2##AF533877|BRSK2|9024|BR serine/threonine kinase 2##AF533878|BRSK2|9024|BR serine/threonine kinase 2##AF533879|BRSK2|9024|BR serine/threonine kinase 2##AF533880|BRSK2|9024|BR serine/threonine kinase 2##NM_004420|DUSP8|1850|dual specificity phosphatase 8##U27193|DUSP8|1850|dual specificity phosphatase 8##AB126070|KRTAP5-1|387264|keratin associated protein 5-1##NM_001005922|KRTAP5-1|387264|keratin associated protein 5-1##BC132882|KRTAP5-2|440021|keratin associated protein 5-2##BC132908|KRTAP5-2|440021|keratin associated protein 5-2##AJ628245|KRTAP5-2|440021|keratin associated protein 5-2##NM_001004325|KRTAP5-2|440021|keratin associated protein 5-2##AB126071|KRTAP5-2|440021|keratin associated protein 5-2	0.99947	CTCF.p2:22:0.999
chr1	210757850	210757964	reg1002419.p1	14.552	+	NM_001170580 BC051191	-255266	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	-255642	+	NM_001122834 NM_001170564 AK297193	-256311	+	AF078741 AF078742 BC113709 BC143599 TSC_hg19_v1_chr1_-_211307437 AJ001366 NM_002238 NM_172362	549478	-	TSC_hg19_v1_chr1_+_211432710 NM_001136223 NM_001136224 NM_001136225	674801	+	TSC_hg19_v1_chr1_+_211432726 AK131312	674820	+	NM_001170580|HHAT|55733|hedgehog acyltransferase##BC051191|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase##NM_001122834|HHAT|55733|hedgehog acyltransferase##NM_001170564|HHAT|55733|hedgehog acyltransferase##AK297193|HHAT|55733|hedgehog acyltransferase##AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_001136223|RCOR3|55758|REST corepressor 3##NM_001136224|RCOR3|55758|REST corepressor 3##NM_001136225|RCOR3|55758|REST corepressor 3##AK131312|RCOR3|55758|REST corepressor 3	0.864107	CTCF.p2:-13:0.864
chr11	73006610	73006743	reg1003860.p1	14.550	+	BC009391 NM_004154 BC000571 AF218005 X97058 AK311529 U52464	-23337	+	AF007892 AX775903 NM_176798	-25738	+	NM_176796 NM_176797 AF007891	-31100	+	TSC_hg19_v1_chr11_+_73019337 AK074500	12728	+	BC137228 NM_014786 AF378754	12989	+	TSC_hg19_v1_chr11_-_73020422 AK300095	13747	-	BC009391|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_004154|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##BC000571|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF218005|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##X97058|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##U52464|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007892|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AX775903|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176798|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176796|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176797|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007891|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK300095|LOC100287837|100287837|uncharacterized LOC100287837	0.210891	CTCF.p2:-4:0.211
chr1	55137828	55137959	reg1003608.p1	14.550	+	NM_001039464 BC028620 CR749830 AK302446 AK302703 BX648088 AK093272 AX748025 BC144516 AK301894	-30440	+	CU676764 AY358629 BC015993 BC020874 NM_176782 AK091901 AX747244	-48745	-	NM_015547 NM_147161 TSC_hg19_v1_chr1_+_55013900 BC001517 AK023937 AK223570 AB014607 BC093844 BC093846 AF416921 AF416922	-123999	+	AK025524 NM_004623 TSC_hg19_v1_chr1_+_55181537 AF063602 AK292426 AK090964 AX746706 AK222562 AF073887 BC001276 BT006817 CU674642	43644	+	BC007956 AK289679 TSC_hg19_v1_chr1_-_55230197 BC011758 NM_152268	92299	-	AK000626 NM_001114108 NM_017904	129012	-	NM_001039464|HEATR8|374977|HEAT repeat containing 8##BC028620|HEATR8-TTC4|100527960|HEATR8-TTC4 readthrough##CR749830|HEATR8-TTC4|100527960|HEATR8-TTC4 readthrough##AK302446|HEATR8|374977|HEAT repeat containing 8##AK302703|HEATR8|374977|HEAT repeat containing 8##BX648088|HEATR8-TTC4|100527960|HEATR8-TTC4 readthrough##AK093272|HEATR8|374977|HEAT repeat containing 8##BC144516|HEATR8|374977|HEAT repeat containing 8##AK301894|HEATR8|374977|HEAT repeat containing 8##AY358629|FAM151A|338094|family with sequence similarity 151, member A##BC015993|FAM151A|338094|family with sequence similarity 151, member A##BC020874|FAM151A|338094|family with sequence similarity 151, member A##NM_176782|FAM151A|338094|family with sequence similarity 151, member A##AK091901|FAM151A|338094|family with sequence similarity 151, member A##NM_015547|ACOT11|26027|acyl-CoA thioesterase 11##NM_147161|ACOT11|26027|acyl-CoA thioesterase 11##BC001517|ACOT11|26027|acyl-CoA thioesterase 11##AK023937|ACOT11|26027|acyl-CoA thioesterase 11##AK223570|ACOT11|26027|acyl-CoA thioesterase 11##AB014607|ACOT11|26027|acyl-CoA thioesterase 11##BC093844|ACOT11|26027|acyl-CoA thioesterase 11##BC093846|ACOT11|26027|acyl-CoA thioesterase 11##AF416921|ACOT11|26027|acyl-CoA thioesterase 11##AF416922|ACOT11|26027|acyl-CoA thioesterase 11##AK025524|TTC4|7268|tetratricopeptide repeat domain 4##NM_004623|TTC4|7268|tetratricopeptide repeat domain 4##AF063602|TTC4|7268|tetratricopeptide repeat domain 4##AK292426|TTC4|7268|tetratricopeptide repeat domain 4##AK090964|TTC4|7268|tetratricopeptide repeat domain 4##AK222562|TTC4|7268|tetratricopeptide repeat domain 4##AF073887|TTC4|7268|tetratricopeptide repeat domain 4##BC001276|TTC4|7268|tetratricopeptide repeat domain 4##BT006817|TTC4|7268|tetratricopeptide repeat domain 4##BC007956|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##AK289679|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##BC011758|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##NM_152268|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##AK000626|TTC22|55001|tetratricopeptide repeat domain 22##NM_001114108|TTC22|55001|tetratricopeptide repeat domain 22##NM_017904|TTC22|55001|tetratricopeptide repeat domain 22	1.147752	CTCF.p2:-11:0.910	CTCF.p2:-35:0.238
chr22	35546616	35546742	reg1002630.p1	14.550	+	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	-84530	+	AJ007583 AB011181 NM_004737 NM_133642	-1230309	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-2092324	-	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	106797	+	AK293694 NM_001135729	148588	+	TSC_hg19_v1_chr22_+_35695855 NM_001135730 NM_001135732 NM_005488 AK026576 AJ006973 AY358980	149152	+	CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)##NM_001135730|TOM1|10043|target of myb1 (chicken)##NM_001135732|TOM1|10043|target of myb1 (chicken)##NM_005488|TOM1|10043|target of myb1 (chicken)##AK026576|TOM1|10043|target of myb1 (chicken)##AJ006973|TOM1|10043|target of myb1 (chicken)##AY358980|TOM1|10043|target of myb1 (chicken)	0.998721	CTCF.p2:20:0.999
chr1	244964607	244964750	reg1003796.p1	14.549	+	TSC_hg19_v1_chr1_+_244816472 AF151904 AF229834	-148157	+	TSC_hg19_v1_chr1_+_244816428 BC004485 BC020640	-148270	+	AK314664 TSC_hg19_v1_chr1_+_244816381	-148297	+	TSC_hg19_v1_chr1_+_244998628 AK125259 NM_198076	34031	+	TSC_hg19_v1_chr1_+_244998959 AK130498 BC062419 BC018519	34262	+	TSC_hg19_v1_chr1_+_244998992 AK000866 BC095486 AK300760 BC064399 AF086182	34308	+	AF151904|PPPDE1|51029|PPPDE peptidase domain containing 1##AF229834|PPPDE1|51029|PPPDE peptidase domain containing 1##BC004485|PPPDE1|51029|PPPDE peptidase domain containing 1##BC020640|PPPDE1|51029|PPPDE peptidase domain containing 1##AK314664|PPPDE1|51029|PPPDE peptidase domain containing 1##AK125259|FAM36A|116228|family with sequence similarity 36, member A##NM_198076|FAM36A|116228|family with sequence similarity 36, member A##AK130498|FAM36A|116228|family with sequence similarity 36, member A##BC062419|FAM36A|116228|family with sequence similarity 36, member A##BC018519|FAM36A|116228|family with sequence similarity 36, member A##AK000866|FAM36A|116228|family with sequence similarity 36, member A##BC095486|FAM36A|116228|family with sequence similarity 36, member A##AK300760|FAM36A|116228|family with sequence similarity 36, member A##BC064399|FAM36A|116228|family with sequence similarity 36, member A##AF086182|FAM36A|116228|family with sequence similarity 36, member A	0.388989	CTCF.p2:-21:0.389
chr15	77323843	77323945	reg1002266.p2	14.549	+	TSC_hg19_v1_chr15_+_77287743 AK310072 AB451310 AB451440 AF038602 AF038603 DQ891779 DQ894963 AB528365	-36067	+	AK304052 U94778 AK316220 TSC_hg19_v1_chr15_+_77287720 AK298733	-36188	+	TSC_hg19_v1_chr15_+_77287465 AK309856 NM_003978 AK310126 BC008602	-36404	+	TSC_hg19_v1_chr15_-_77363389 AF054840 CU674348 AB529127 AF133423 AK293677 AK001310 AK001305 BC004280 BC009248 AK075336 AK075482 AK095520 AK298157	39392	-	TSC_hg19_v1_chr15_-_77363454 BC011206 BC000704 AK001326	39589	-	TSC_hg19_v1_chr15_-_77363522 NM_001168412 NM_005724 NM_198902	39650	-	AK310072|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451310|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451440|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038603|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ891779|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ894963|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF054840|TSPAN3|10099|tetraspanin 3##AF133423|TSPAN3|10099|tetraspanin 3##AK293677|TSPAN3|10099|tetraspanin 3##AK001310|TSPAN3|10099|tetraspanin 3##AK001305|TSPAN3|10099|tetraspanin 3##BC004280|TSPAN3|10099|tetraspanin 3##BC009248|TSPAN3|10099|tetraspanin 3##AK075336|TSPAN3|10099|tetraspanin 3##AK075482|TSPAN3|10099|tetraspanin 3##AK298157|TSPAN3|10099|tetraspanin 3##BC011206|TSPAN3|10099|tetraspanin 3##BC000704|TSPAN3|10099|tetraspanin 3##AK001326|TSPAN3|10099|tetraspanin 3##NM_001168412|TSPAN3|10099|tetraspanin 3##NM_005724|TSPAN3|10099|tetraspanin 3##NM_198902|TSPAN3|10099|tetraspanin 3	0.056919	
chr5	96632916	96633049	reg1002531.p1	14.549	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-113995	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-114040	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	-114074	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	1472059	+	BC054860 BC117134 NM_001270 AF006513	1629246	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	3238091	+	NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A	0.0	
chr3	195590078	195590182	reg1002779.p1	14.547	+	EF091824 AJ242549 AJ242550 AJ276359 AJ277412 AJ277505 AJ400633 AJ400849 AJ400850 AJ400851 AJ400852 AJ400853 AJ400854 AJ400855 AJ400856 AJ400857 AJ400858 TSC_hg19_v1_chr3_-_195538801 AK307054 NM_004532 NM_018406 NM_138297	-51359	-	NM_001098516	-139033	+	TSC_hg19_v1_chr3_+_195447848 AY358449 AK075138 BC029267 AK027314 BC044243 CU688620 CU692194	-142286	+	BC008884 AK225786 BC020389 TSC_hg19_v1_chr3_-_195619679	29435	-	AK131539 NM_001010938	32301	-	NM_005781 L13738	45786	-	EF091824|MUC4|4585|mucin 4, cell surface associated##AJ242549|MUC4|4585|mucin 4, cell surface associated##AJ242550|MUC4|4585|mucin 4, cell surface associated##AJ276359|MUC4|4585|mucin 4, cell surface associated##AJ277412|MUC4|4585|mucin 4, cell surface associated##AJ277505|MUC4|4585|mucin 4, cell surface associated##AJ400633|MUC4|4585|mucin 4, cell surface associated##AJ400849|MUC4|4585|mucin 4, cell surface associated##AJ400850|MUC4|4585|mucin 4, cell surface associated##AJ400851|MUC4|4585|mucin 4, cell surface associated##AJ400852|MUC4|4585|mucin 4, cell surface associated##AJ400853|MUC4|4585|mucin 4, cell surface associated##AJ400854|MUC4|4585|mucin 4, cell surface associated##AJ400855|MUC4|4585|mucin 4, cell surface associated##AJ400856|MUC4|4585|mucin 4, cell surface associated##AJ400857|MUC4|4585|mucin 4, cell surface associated##AJ400858|MUC4|4585|mucin 4, cell surface associated##AK307054|MUC4|4585|mucin 4, cell surface associated##NM_004532|MUC4|4585|mucin 4, cell surface associated##NM_018406|MUC4|4585|mucin 4, cell surface associated##NM_138297|MUC4|4585|mucin 4, cell surface associated##NM_001098516|MUC20|200958|mucin 20, cell surface associated##AY358449|MUC20|200958|mucin 20, cell surface associated##AK075138|MUC20|200958|mucin 20, cell surface associated##BC029267|MUC20|200958|mucin 20, cell surface associated##AK027314|MUC20|200958|mucin 20, cell surface associated##BC044243|MUC20|200958|mucin 20, cell surface associated##BC008884|TNK2|10188|tyrosine kinase, non-receptor, 2##AK225786|TNK2|10188|tyrosine kinase, non-receptor, 2##BC020389|TNK2|10188|tyrosine kinase, non-receptor, 2##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_005781|TNK2|10188|tyrosine kinase, non-receptor, 2##L13738|TNK2|10188|tyrosine kinase, non-receptor, 2	0.979749	CTCF.p2:-7:0.980
chr11	118016145	118016273	reg1002670.p1	14.546	+	TSC_hg19_v1_chr11_-_118016149 BC035017 NM_001142349	-51	-	BC004855 TSC_hg19_v1_chr11_+_117947792 AK308434 AK296855 AK303173 AK290361 AK304215 AF179224 AY358530 AF216312 BC011703 AK172766	-68382	+	NM_001083947 NM_001173551 NM_001173552 NM_019894 AK304113 AK311290 TSC_hg19_v1_chr11_+_117947754	-68466	+	AY149967 AK314531 NM_001142348 NM_174934	7372	-	AF007783 BT019487 DQ892426 DQ892634 DQ895640 U87555 AY358945 BC036793 AF049498 AK308834 AK313891 TSC_hg19_v1_chr11_-_118047330	31028	-	NM_004588 TSC_hg19_v1_chr11_-_118047340	31133	-	BC035017|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_001142349|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##BC004855|TMPRSS4|56649|transmembrane protease, serine 4##AK308434|TMPRSS4|56649|transmembrane protease, serine 4##AK296855|TMPRSS4|56649|transmembrane protease, serine 4##AK303173|TMPRSS4|56649|transmembrane protease, serine 4##AK290361|TMPRSS4|56649|transmembrane protease, serine 4##AK304215|TMPRSS4|56649|transmembrane protease, serine 4##AF179224|TMPRSS4|56649|transmembrane protease, serine 4##AY358530|TMPRSS4|56649|transmembrane protease, serine 4##AF216312|TMPRSS4|56649|transmembrane protease, serine 4##BC011703|TMPRSS4|56649|transmembrane protease, serine 4##AK172766|TMPRSS4|56649|transmembrane protease, serine 4##NM_001083947|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173551|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173552|TMPRSS4|56649|transmembrane protease, serine 4##NM_019894|TMPRSS4|56649|transmembrane protease, serine 4##AK304113|TMPRSS4|56649|transmembrane protease, serine 4##AY149967|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##AK314531|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_001142348|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_174934|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##AF007783|SCN2B|6327|sodium channel, voltage-gated, type II, beta##BT019487|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ892426|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ892634|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ895640|SCN2B|6327|sodium channel, voltage-gated, type II, beta##U87555|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AY358945|SCN2B|6327|sodium channel, voltage-gated, type II, beta##BC036793|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AF049498|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK308834|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK313891|SCN2B|6327|sodium channel, voltage-gated, type II, beta##NM_004588|SCN2B|6327|sodium channel, voltage-gated, type II, beta	0.994653	CTCF.p2:-12:0.995
chr11	132272061	132272186	reg1002350.p1	14.544	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-490784	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-491499	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-1031654	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	540891	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	541482	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	1130191	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.187645	
chr1	157347164	157347312	reg1003948.p1	14.544	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-238955	-	TSC_hg19_v1_chr1_-_157108158 L16464	-239088	-	AK131392 NM_001004341	-277639	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	174992	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	220563	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	323289	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.270007	CTCF.p2:-10:0.270
chr6	42844928	42845034	reg1002897.p1	14.544	+	AL833540 NM_015349 BC130302	-56150	+	TSC_hg19_v1_chr6_+_42751233 AK098234	-93740	+	TSC_hg19_v1_chr6_+_42750789 AK096036	-94320	+	TSC_hg19_v1_chr6_+_42847388 BC064519 S81578 BC036861	2416	+	TSC_hg19_v1_chr6_+_42847644 AK291310 AK299816 AK021904 AK091341 AK291949 AK297324 BC058020 BC073890 NM_198486 CU687268 EU832458 EU832540	2671	+	HQ257974 TSC_hg19_v1_chr6_-_42858560 BC060325 BC051007 BC073804 BC094854 NM_001008739	13580	-	AL833540|KIAA0240|23506|KIAA0240##NM_015349|KIAA0240|23506|KIAA0240##BC130302|KIAA0240|23506|KIAA0240##AK098234|FLJ38717|401261|FLJ38717 protein##AK096036|FLJ38717|401261|FLJ38717 protein##BC064519|RPL7L1|285855|ribosomal protein L7-like 1##BC036861|RPL7L1|285855|ribosomal protein L7-like 1##AK291310|RPL7L1|285855|ribosomal protein L7-like 1##AK299816|RPL7L1|285855|ribosomal protein L7-like 1##AK021904|RPL7L1|285855|ribosomal protein L7-like 1##AK291949|RPL7L1|285855|ribosomal protein L7-like 1##BC058020|RPL7L1|285855|ribosomal protein L7-like 1##BC073890|RPL7L1|285855|ribosomal protein L7-like 1##NM_198486|RPL7L1|285855|ribosomal protein L7-like 1##EU832458|RPL7L1|285855|ribosomal protein L7-like 1##EU832540|RPL7L1|285855|ribosomal protein L7-like 1##HQ257974|C6orf226|441150|chromosome 6 open reading frame 226##BC060325|C6orf226|441150|chromosome 6 open reading frame 226##BC051007|C6orf226|441150|chromosome 6 open reading frame 226##BC073804|C6orf226|441150|chromosome 6 open reading frame 226##BC094854|C6orf226|441150|chromosome 6 open reading frame 226##NM_001008739|C6orf226|441150|chromosome 6 open reading frame 226	0.997088	CTCF.p2:11:0.997
chr1	20521782	20521905	reg1003357.p1	14.542	+	BC047428 NM_152376 BX648631 AK058158 TSC_hg19_v1_chr1_+_20512591	-9259	+	NM_001105572	-20157	-	TSC_hg19_v1_chr1_+_20480706 BC041651	-41080	+	NM_001039500 AK125833	95577	+	AY204901 TSC_hg19_v1_chr1_-_20812323	290455	-	NM_018584 TSC_hg19_v1_chr1_-_20812743	290938	-	BC047428|UBXN10|127733|UBX domain protein 10##NM_152376|UBXN10|127733|UBX domain protein 10##BX648631|UBXN10|127733|UBX domain protein 10##AK058158|UBXN10|127733|UBX domain protein 10##NM_001105572|PLA2G2C|391013|phospholipase A2, group IIC##NM_001039500|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AK125833|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AY204901|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##NM_018584|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1	0.048849	
chr2	64873604	64873716	reg1002545.p1	14.542	+	TSC_hg19_v1_chr2_+_64751580 AL833962	-122058	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	-122176	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	-192012	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	7189	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	7387	-	TSC_hg19_v1_chr2_-_65090764 AK097952	217081	-	AL833962|AFTPH|54812|aftiphilin##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2	0.961908	CTCF.p2:-7:0.962
chr19	30185623	30185754	reg1003591.p1	14.540	+	TSC_hg19_v1_chr19_+_30156375 AK225814	-29267	+	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	-29339	+	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	-88499	+	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	20404	-	TSC_hg19_v1_chr19_-_30206402 NM_031448	20734	-	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	117213	+	NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1	0.975352	CTCF.p2:-11:0.975
chr2	241000524	241000650	reg1003384.p1	14.540	+	NM_173351	-15099	-	NM_001080835	-18189	-	NM_001005853 BC137561 BC137562	-30712	-	TSC_hg19_v1_chr2_-_241075721 AF487338 BC033955 NM_001163424 AF453951 NM_138336 AB463905	75146	-	NM_148961	79485	-	TSC_hg19_v1_chr2_+_241375079 BC051279 NM_002081 X54232	374493	+	NM_173351|OR6B3|150681|olfactory receptor, family 6, subfamily B, member 3##NM_001080835|PRR21|643905|proline rich 21##NM_001005853|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137561|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137562|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##AF487338|MYEOV2|150678|myeloma overexpressed 2##BC033955|MYEOV2|150678|myeloma overexpressed 2##NM_001163424|MYEOV2|150678|myeloma overexpressed 2##AF453951|MYEOV2|150678|myeloma overexpressed 2##NM_138336|MYEOV2|150678|myeloma overexpressed 2##NM_148961|OTOS|150677|otospiralin##BC051279|GPC1|2817|glypican 1##NM_002081|GPC1|2817|glypican 1##X54232|GPC1|2817|glypican 1	0.988327	CTCF.p2:-2:0.988
chr1	41733960	41734096	reg1003864.p1	14.539	+	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-26192	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-26243	-	BC021252 NM_001172221	-105340	-	BC034393 X55177 M65199 NM_001956	216291	-	TSC_hg19_v1_chr1_-_42384357 BC040942	650314	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	650345	-	BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC021252|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172221|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.950631	CTCF.p2:-3:0.951
chr1	175094545	175094645	reg1002117.p2	14.538	+	AK127044 NM_022093	-57602	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-102024	-	TSC_hg19_v1_chr1_+_174969165 BC005865 AK294042 AF314752 BC022352 AL035305 AF057356 BC067823 BC078151 AF275803 AY423723	-125385	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	67435	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	618115	-	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	1081570	-	AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK294042|CACYBP|27101|calcyclin binding protein##AF314752|CACYBP|27101|calcyclin binding protein##BC022352|CACYBP|27101|calcyclin binding protein##AL035305|CACYBP|27101|calcyclin binding protein##AF057356|CACYBP|27101|calcyclin binding protein##BC067823|CACYBP|27101|calcyclin binding protein##BC078151|CACYBP|27101|calcyclin binding protein##AF275803|CACYBP|27101|calcyclin binding protein##AY423723|CACYBP|27101|calcyclin binding protein##D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2	0.238429	CTCF.p2:8:0.238
chr2	100175671	100175812	reg1003192.p1	14.538	+	TSC_hg19_v1_chr2_-_100106480 AF206019 NM_001037872 NM_016316 BC037734	-69232	-	TSC_hg19_v1_chr2_-_100106444 AK307719 AB047646 AF357886 AF151538	-69301	-	AK025799 TSC_hg19_v1_chr2_-_100046333 AK025176 AJ131720	-129404	-	BC136579 BC144266 U34360 TSC_hg19_v1_chr2_-_100720992	545225	-	TSC_hg19_v1_chr2_-_100721160 AK290468	545442	-	BC040181 TSC_hg19_v1_chr2_+_100721424	545665	+	AF206019|REV1|51455|REV1 homolog (S. cerevisiae)##NM_001037872|REV1|51455|REV1 homolog (S. cerevisiae)##NM_016316|REV1|51455|REV1 homolog (S. cerevisiae)##BC037734|REV1|51455|REV1 homolog (S. cerevisiae)##AK307719|REV1|51455|REV1 homolog (S. cerevisiae)##AB047646|REV1|51455|REV1 homolog (S. cerevisiae)##AF357886|REV1|51455|REV1 homolog (S. cerevisiae)##AF151538|REV1|51455|REV1 homolog (S. cerevisiae)##AK025176|REV1|51455|REV1 homolog (S. cerevisiae)##AJ131720|REV1|51455|REV1 homolog (S. cerevisiae)##BC136579|AFF3|3899|AF4/FMR2 family, member 3##BC144266|AFF3|3899|AF4/FMR2 family, member 3##U34360|AFF3|3899|AF4/FMR2 family, member 3##AK290468|AFF3|3899|AF4/FMR2 family, member 3	1.248745	CTCF.p2:-16:0.988
chr1	169515758	169515891	reg1003481.p1	14.537	+	AF160812 TSC_hg19_v1_chr1_-_169455181 AF135488 BC018514 AK313779 NM_006996 AF153330	-60649	-	AK304021 TSC_hg19_v1_chr1_-_169454976 AF272359 AJ237724	-60842	-	AK098712 AK223354 AL049687 NM_021179 BC008388 BC008389 BC026073	-119142	-	AB385005 AK226079 M14335 TSC_hg19_v1_chr1_-_169555700 M16967	39840	-	TSC_hg19_v1_chr1_-_169555717 AK291613 AK300469 NM_000130	39915	-	M25322 AK312884 BC068533 NM_003005	83538	-	AF160812|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AF135488|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##BC018514|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AK313779|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##NM_006996|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AF153330|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AK304021|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AF272359|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AJ237724|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AK098712|C1orf114|57821|chromosome 1 open reading frame 114##AK223354|C1orf114|57821|chromosome 1 open reading frame 114##AL049687|C1orf114|57821|chromosome 1 open reading frame 114##NM_021179|C1orf114|57821|chromosome 1 open reading frame 114##BC008388|C1orf114|57821|chromosome 1 open reading frame 114##BC008389|C1orf114|57821|chromosome 1 open reading frame 114##BC026073|C1orf114|57821|chromosome 1 open reading frame 114##AK226079|F5|2153|coagulation factor V (proaccelerin, labile factor)##M14335|F5|2153|coagulation factor V (proaccelerin, labile factor)##M16967|F5|2153|coagulation factor V (proaccelerin, labile factor)##AK291613|F5|2153|coagulation factor V (proaccelerin, labile factor)##AK300469|F5|2153|coagulation factor V (proaccelerin, labile factor)##NM_000130|F5|2153|coagulation factor V (proaccelerin, labile factor)##M25322|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##AK312884|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##BC068533|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##NM_003005|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)	0.999028	CTCF.p2:7:0.999
chr3	98321055	98321187	reg1003131.p1	14.533	+	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	-8702	-	AK313375 BC101779 BC101781 BC069437 CU686810 NM_005290	-70312	+	TSC_hg19_v1_chr3_-_98241835 NM_001040181 NM_001040182 NM_001040183 NM_001040199 NM_001040200 NM_019895	-79255	-	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	130124	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	130466	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	299371	-	AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AK313375|GPR15|2838|G protein-coupled receptor 15##BC101779|GPR15|2838|G protein-coupled receptor 15##BC101781|GPR15|2838|G protein-coupled receptor 15##BC069437|GPR15|2838|G protein-coupled receptor 15##NM_005290|GPR15|2838|G protein-coupled receptor 15##NM_001040181|CLDND1|56650|claudin domain containing 1##NM_001040182|CLDND1|56650|claudin domain containing 1##NM_001040183|CLDND1|56650|claudin domain containing 1##NM_001040199|CLDND1|56650|claudin domain containing 1##NM_001040200|CLDND1|56650|claudin domain containing 1##NM_019895|CLDND1|56650|claudin domain containing 1##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2	0.992024	CTCF.p2:-17:0.992
chr9	116420366	116420470	reg1002023.p1	14.533	+	TSC_hg19_v1_chr9_+_116356408 BC018072 BC019039 CU676160	-63937	+	AF490838 NM_144489 AK054584	-64208	+	U27655 AK125094 TSC_hg19_v1_chr9_+_116343207	-77230	+	TSC_hg19_v1_chr9_+_116638585 BC036039 NM_133374 BC136287 BC143826 AK126896 BC053892	218181	+	TSC_hg19_v1_chr9_-_116840540 CU692002 AB463406 X04494	420082	-	TSC_hg19_v1_chr9_-_116840546 AY544123	420129	-	BC018072|RGS3|5998|regulator of G-protein signaling 3##BC019039|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3##U27655|RGS3|5998|regulator of G-protein signaling 3##AK125094|RGS3|5998|regulator of G-protein signaling 3##BC036039|ZNF618|114991|zinc finger protein 618##NM_133374|ZNF618|114991|zinc finger protein 618##BC136287|ZNF618|114991|zinc finger protein 618##BC143826|ZNF618|114991|zinc finger protein 618##AK126896|ZNF618|114991|zinc finger protein 618##BC053892|ZNF618|114991|zinc finger protein 618##X04494|AMBP|259|alpha-1-microglobulin/bikunin precursor##AY544123|AMBP|259|alpha-1-microglobulin/bikunin precursor	0.997726	CTCF.p2:17:0.998
chr10	14865280	14865408	reg1002430.p2	14.532	+	AK127413 NM_031453	-48449	-	TSC_hg19_v1_chr10_-_14646423 BC072452	-218915	-	TSC_hg19_v1_chr10_-_14646259 BC064407	-219027	-	TSC_hg19_v1_chr10_-_14880025 BC133042 BC133044 BC144619 NM_001029954 AK301259	14678	-	TSC_hg19_v1_chr10_+_14880314 BC108738 NM_016299 AK225265 AK225651 AK302452 AK000880 BC065281 BC038845	14891	+	TSC_hg19_v1_chr10_+_14880335 AF112210 BC119690 BC119691	14994	+	AK127413|FAM107B|83641|family with sequence similarity 107, member B##NM_031453|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC133042|CDNF|441549|cerebral dopamine neurotrophic factor##BC133044|CDNF|441549|cerebral dopamine neurotrophic factor##BC144619|CDNF|441549|cerebral dopamine neurotrophic factor##NM_001029954|CDNF|441549|cerebral dopamine neurotrophic factor##BC108738|HSPA14|51182|heat shock 70kDa protein 14##NM_016299|HSPA14|51182|heat shock 70kDa protein 14##AK225265|HSPA14|51182|heat shock 70kDa protein 14##AK225651|HSPA14|51182|heat shock 70kDa protein 14##AK302452|HSPA14|51182|heat shock 70kDa protein 14##AK000880|HSPA14|51182|heat shock 70kDa protein 14##BC065281|HSPA14|51182|heat shock 70kDa protein 14##BC038845|HSPA14|51182|heat shock 70kDa protein 14##AF112210|HSPA14|51182|heat shock 70kDa protein 14##BC119690|HSPA14|51182|heat shock 70kDa protein 14##BC119691|HSPA14|51182|heat shock 70kDa protein 14	0.0	
chr3	156391803	156391983	reg1000590.p1	14.532	+	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	-118950	-	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	-119012	-	NM_172159 BC043166 AK127240	-383083	+	NM_015508	311	+	AK291261 TSC_hg19_v1_chr3_+_156392402 BX537965 BC050350	509	+	CR749647 NM_001184717	821	+	AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##CR749647|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184717|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	0.0	
chr3	161569883	161570018	reg1003986.p1	14.532	+	NM_001080440	-355355	+	AF458592 BC037817 NM_001040100	-480142	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-630829	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	3226328	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	3344555	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	3985243	-	NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase	0.559728	CTCF.p2:0:0.560
chr16	27246418	27246537	reg1002120.p1	14.531	+	AK297166 NM_001145348	-31182	+	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	-31650	+	NM_001145545 BC031257 AK311574	-168230	+	TSC_hg19_v1_chr16_-_27280055 AK315674	33575	-	TSC_hg19_v1_chr16_-_27280058 AF161451 AF161455 AK056795 NM_145080	33608	-	TSC_hg19_v1_chr16_+_27325254 AK314863 NM_000418 NM_001008699 AK303255	78777	+	AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##AK315674|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AF161451|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AF161455|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AK056795|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##NM_145080|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AK314863|IL4R|3566|interleukin 4 receptor##NM_000418|IL4R|3566|interleukin 4 receptor##NM_001008699|IL4R|3566|interleukin 4 receptor##AK303255|IL4R|3566|interleukin 4 receptor	0.93352	CTCF.p2:0:0.934
chr19	54735651	54735779	reg1002496.p2	14.530	+	AK290917 NM_001081450 NM_006864	-8773	-	TSC_hg19_v1_chr19_+_54704724 AB055775 AK095055 NM_001013 BC068055 BC050660 BC007410 BC007434 BC071940 BC007857 BC071941	-31013	+	NM_001077446 TSC_hg19_v1_chr19_+_54695138 BC020805 DQ893336 DQ896652	-40556	+	AF000575 EU814627 EU814628 AF009632 AF009633 AF009634 AF009635 AF009636 AF009637 AF009638 AF009639 AF009640 AF009641 AF009642 AF009643 AF009644 AF031553 AF031554 AF031555 AF031556 BC028153 AB463830 BC041708 BC104993 BC112198 EU915603 EU915604 EU915605 U91928 AK223265 AF025533 NM_024318	10946	-	DQ894102 AK090399 AF025534 AK057072 BC025704 AK223296 AK301112 AK096122 AK301338 AK092867 AK290845 NM_001081442 NM_001081443 NM_006840	25396	-	BC036827 AF283986 AF025528 BC025766 TSC_hg19_v1_chr19_-_54784966 AK297071 AK226015 AK297041 NM_001080978 NM_005874	49262	-	AK290917|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##NM_001081450|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##NM_006864|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AB055775|RPS9|6203|ribosomal protein S9##AK095055|RPS9|6203|ribosomal protein S9##NM_001013|RPS9|6203|ribosomal protein S9##BC068055|RPS9|6203|ribosomal protein S9##BC050660|RPS9|6203|ribosomal protein S9##BC007410|RPS9|6203|ribosomal protein S9##BC007434|RPS9|6203|ribosomal protein S9##BC071940|RPS9|6203|ribosomal protein S9##BC007857|RPS9|6203|ribosomal protein S9##BC071941|RPS9|6203|ribosomal protein S9##NM_001077446|TSEN34|79042|tRNA splicing endonuclease 34 homolog (S. cerevisiae)##BC020805|TSEN34|79042|tRNA splicing endonuclease 34 homolog (S. cerevisiae)##DQ893336|TSEN34|79042|tRNA splicing endonuclease 34 homolog (S. cerevisiae)##DQ896652|TSEN34|79042|tRNA splicing endonuclease 34 homolog (S. cerevisiae)##AF000575|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##EU814627|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##EU814628|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009632|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009633|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009634|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009635|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009636|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009637|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009638|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009639|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009640|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009641|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009642|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009643|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009644|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF031553|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF031554|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF031555|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF031556|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##BC028153|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##BC041708|LILRA6|79168|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6##BC104993|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##BC112198|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##EU915603|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##EU915604|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##EU915605|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##U91928|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AK223265|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF025533|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##NM_024318|LILRA6|79168|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6##DQ894102|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK090399|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AF025534|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK057072|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##BC025704|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK223296|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK301112|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK096122|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK301338|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK092867|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK290845|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##NM_001081442|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##NM_001081443|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##NM_006840|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##BC036827|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AF283986|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AF025528|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##BC025766|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK297071|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK226015|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK297041|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##NM_001080978|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##NM_005874|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2	1.123526	CTCF.p2:0:0.991
chr22	43670039	43670167	reg1002624.p1	14.530	+	TSC_hg19_v1_chr22_-_43583141 NM_015140	-86947	-	D63487 AL590888 CT841516 TSC_hg19_v1_chr22_-_43583100 BC001070	-87009	-	TSC_hg19_v1_chr22_+_43547578 BC001110 M36035	-122527	+	AB528481 AF525689 BC127263 BC047916 TSC_hg19_v1_chr22_-_43739356 AK127719 NM_173050	69235	-	TSC_hg19_v1_chr22_+_43808019 AK290541 AK297276 AK299516 AK299531 NM_001044370	137914	+	TSC_hg19_v1_chr22_+_43808109 AK289774	138014	+	NM_015140|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##D63487|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##AL590888|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##CT841516|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##BC001070|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##BC001110|TSPO|706|translocator protein (18kDa)##M36035|TSPO|706|translocator protein (18kDa)##AF525689|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC127263|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC047916|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##AK127719|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##NM_173050|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##AK290541|MPPED1|758|metallophosphoesterase domain containing 1##AK297276|MPPED1|758|metallophosphoesterase domain containing 1##AK299516|MPPED1|758|metallophosphoesterase domain containing 1##AK299531|MPPED1|758|metallophosphoesterase domain containing 1##NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1##AK289774|MPPED1|758|metallophosphoesterase domain containing 1	0.796638	CTCF.p2:-17:0.797
chr6	41814656	41814783	reg1004147.p1	14.529	+	BC107435 AF216754 TSC_hg19_v1_chr6_+_41755425 BC018624 BC067252 BC022274 AB435319 L34839	-59286	+	TSC_hg19_v1_chr6_+_41755397 BC015975	-59330	+	NM_001134493	-59539	+	TSC_hg19_v1_chr6_-_41863114 BC014176 NM_018561	48382	-	AK097385 EU446931 AB463862 BC040950 AK023092 AF097725 BC032552 TSC_hg19_v1_chr6_-_41888856 AK293412	74049	-	TSC_hg19_v1_chr6_-_41888858 BC019866 AK300573 AK307070 BC012618 NM_004275	74155	-	BC107435|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AF216754|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC018624|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC067252|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC022274|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AB435319|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##L34839|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC015975|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##NM_001134493|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC014176|USP49|25862|ubiquitin specific peptidase 49##NM_018561|USP49|25862|ubiquitin specific peptidase 49##AK097385|MED20|9477|mediator complex subunit 20##EU446931|MED20|9477|mediator complex subunit 20##BC040950|MED20|9477|mediator complex subunit 20##AK023092|MED20|9477|mediator complex subunit 20##AF097725|MED20|9477|mediator complex subunit 20##BC032552|MED20|9477|mediator complex subunit 20##AK293412|MED20|9477|mediator complex subunit 20##BC019866|MED20|9477|mediator complex subunit 20##AK300573|MED20|9477|mediator complex subunit 20##AK307070|MED20|9477|mediator complex subunit 20##BC012618|MED20|9477|mediator complex subunit 20##NM_004275|MED20|9477|mediator complex subunit 20	0.022203	
chr18	72009782	72009921	reg1003725.p1	14.528	+	CR749350 NM_001174123	-26742	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	-50672	-	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	-194057	+	TSC_hg19_v1_chr18_-_72124545 NM_001044369	114678	-	TSC_hg19_v1_chr18_+_72163567 NM_018235	153607	+	TSC_hg19_v1_chr18_+_72163611 AK001692 AK300904 AK298309 BC001375	153764	+	CR749350|C18orf63|644041|chromosome 18 open reading frame 63##NM_001174123|C18orf63|644041|chromosome 18 open reading frame 63##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##NM_001044369|FAM69C|125704|family with sequence similarity 69, member C##NM_018235|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK001692|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK300904|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK298309|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##BC001375|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)	0.144701	
chr2	158159145	158159267	reg1001755.p1	14.528	+	BC142676 BC142703 AY277591 NM_014568 AK292154 BC144211	-44913	+	TSC_hg19_v1_chr2_+_157292921 U12424 BC019874	-866252	+	TSC_hg19_v1_chr2_+_157292894 NM_000408 AK292817	-866340	+	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	23078	-	NM_001009959 AK296477	24950	-	L06633 AB528875 CU690346 AF068836 BC036449 TSC_hg19_v1_chr2_-_158300602 AK312753 NM_004288	141358	-	BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##U12424|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC019874|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_000408|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK292817|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein##L06633|CYTIP|9595|cytohesin 1 interacting protein##AF068836|CYTIP|9595|cytohesin 1 interacting protein##BC036449|CYTIP|9595|cytohesin 1 interacting protein##AK312753|CYTIP|9595|cytohesin 1 interacting protein##NM_004288|CYTIP|9595|cytohesin 1 interacting protein	0.999882	CTCF.p2:-16:1.000
chr4	1695256	1695381	reg1003565.p1	14.528	+	BC070112 NM_001013622 BC042071 NM_001174070	-9466	-	AK126919 NM_175918	-309979	+	TSC_hg19_v1_chr4_+_1341031 BC110331 AB040963 NM_020894 BC140901	-354050	+	BT007433 CU677395 DQ892370 DQ895579 Z71188 NM_006527 U75679 BC014908 BC015703 AK315635 TSC_hg19_v1_chr4_-_1714047 AK300826 AK091735 AX747152 AK093314	18674	-	TSC_hg19_v1_chr4_-_1722813 AK303880	27558	-	TSC_hg19_v1_chr4_-_1722981 BC126370 BC009331 BC018921 NM_001127266 NM_138385	27713	-	BC070112|FAM53A|152877|family with sequence similarity 53, member A##NM_001013622|FAM53A|152877|family with sequence similarity 53, member A##BC042071|FAM53A|152877|family with sequence similarity 53, member A##NM_001174070|FAM53A|152877|family with sequence similarity 53, member A##AK126919|CRIPAK|285464|cysteine-rich PAK1 inhibitor##NM_175918|CRIPAK|285464|cysteine-rich PAK1 inhibitor##BC110331|KIAA1530|57654|KIAA1530##AB040963|KIAA1530|57654|KIAA1530##NM_020894|KIAA1530|57654|KIAA1530##BC140901|KIAA1530|57654|KIAA1530##BT007433|SLBP|7884|stem-loop binding protein##DQ892370|SLBP|7884|stem-loop binding protein##DQ895579|SLBP|7884|stem-loop binding protein##Z71188|SLBP|7884|stem-loop binding protein##NM_006527|SLBP|7884|stem-loop binding protein##U75679|SLBP|7884|stem-loop binding protein##BC014908|SLBP|7884|stem-loop binding protein##BC015703|SLBP|7884|stem-loop binding protein##AK315635|SLBP|7884|stem-loop binding protein##AK300826|SLBP|7884|stem-loop binding protein##AK091735|SLBP|7884|stem-loop binding protein##AK093314|SLBP|7884|stem-loop binding protein##AK303880|TMEM129|92305|transmembrane protein 129##BC126370|TMEM129|92305|transmembrane protein 129##BC009331|TMEM129|92305|transmembrane protein 129##BC018921|TMEM129|92305|transmembrane protein 129##NM_001127266|TMEM129|92305|transmembrane protein 129##NM_138385|TMEM129|92305|transmembrane protein 129	0.989953	CTCF.p2:-2:0.990
chr3	124480221	124480353	reg1003266.p1	14.526	+	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	-30971	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	-31048	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	-176759	+	TSC_hg19_v1_chr3_-_124605863 AB587397 DQ892778 DQ896025 M35011 AK315429 J05633	125579	-	TSC_hg19_v1_chr3_-_124606213 BC006541 NM_002213 X53002	125924	-	AF286113 AB035807 AY358831 TSC_hg19_v1_chr3_-_124653596 NM_033049	173296	-	AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##DQ892778|ITGB5|3693|integrin, beta 5##DQ896025|ITGB5|3693|integrin, beta 5##M35011|ITGB5|3693|integrin, beta 5##AK315429|ITGB5|3693|integrin, beta 5##J05633|ITGB5|3693|integrin, beta 5##BC006541|ITGB5|3693|integrin, beta 5##NM_002213|ITGB5|3693|integrin, beta 5##X53002|ITGB5|3693|integrin, beta 5##AF286113|MUC13|56667|mucin 13, cell surface associated##AB035807|MUC13|56667|mucin 13, cell surface associated##AY358831|MUC13|56667|mucin 13, cell surface associated##NM_033049|MUC13|56667|mucin 13, cell surface associated	0.999565	CTCF.p2:-18:1.000
chr3	167765109	167765262	reg1002990.p1	14.526	+	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-311696	+	BC002506 NM_007217 AF022385 NM_145860 TSC_hg19_v1_chr3_-_167452681 BC016353 NM_145859 AK291130	-312534	-	TSC_hg19_v1_chr3_-_167371732 AK097556	-393462	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	47930	-	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	48246	-	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	1098894	-	NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC002506|PDCD10|11235|programmed cell death 10##NM_007217|PDCD10|11235|programmed cell death 10##AF022385|PDCD10|11235|programmed cell death 10##NM_145860|PDCD10|11235|programmed cell death 10##BC016353|PDCD10|11235|programmed cell death 10##NM_145859|PDCD10|11235|programmed cell death 10##AK291130|PDCD10|11235|programmed cell death 10##AK097556|WDR49|151790|WD repeat domain 49##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus	1.954138	CTCF.p2:40:0.962	CTCF.p2:-48:0.992
chr17	7647017	7647132	reg1002673.p1	14.523	+	NM_020877 AB385476 AB463017	-24029	+	AK314841 TSC_hg19_v1_chr17_+_7608520 BC042944 NM_001406 U57001 AK027329	-38595	+	AY766323 DQ431240 NM_001143992 NM_018081 AK001247 AK225273 AK225411 AK303246 BC002336	-55339	+	TSC_hg19_v1_chr17_+_7741696 BC067879	94599	+	AB002344 NM_001080424	96159	+	TSC_hg19_v1_chr17_+_7758383 AK000032 BC057812 NM_203411	111308	+	NM_020877|DNAH2|146754|dynein, axonemal, heavy chain 2##AK314841|EFNB3|1949|ephrin-B3##BC042944|EFNB3|1949|ephrin-B3##NM_001406|EFNB3|1949|ephrin-B3##U57001|EFNB3|1949|ephrin-B3##AK027329|EFNB3|1949|ephrin-B3##AY766323|WRAP53|55135|WD repeat containing, antisense to TP53##DQ431240|WRAP53|55135|WD repeat containing, antisense to TP53##NM_001143992|WRAP53|55135|WD repeat containing, antisense to TP53##NM_018081|WRAP53|55135|WD repeat containing, antisense to TP53##AK001247|WRAP53|55135|WD repeat containing, antisense to TP53##AK225273|WRAP53|55135|WD repeat containing, antisense to TP53##AK225411|WRAP53|55135|WD repeat containing, antisense to TP53##AK303246|WRAP53|55135|WD repeat containing, antisense to TP53##BC002336|WRAP53|55135|WD repeat containing, antisense to TP53##AB002344|KDM6B|23135|lysine (K)-specific demethylase 6B##NM_001080424|KDM6B|23135|lysine (K)-specific demethylase 6B##AK000032|TMEM88|92162|transmembrane protein 88##BC057812|TMEM88|92162|transmembrane protein 88##NM_203411|TMEM88|92162|transmembrane protein 88	0.768789	CTCF.p2:-27:0.769
chr11	45124762	45124897	reg1001947.p2	14.522	+	AF275818 NM_020229	-9266	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	-152412	-	TSC_hg19_v1_chr11_-_44956087 AF010315	-168722	-	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	182921	-	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	562355	-	NM_001145265 NM_001145266	700793	+	AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1	0.948159	CTCF.p2:15:0.948
chr1	159976260	159976374	reg1003400.p1	14.521	+	BC074754 BC070213 AY358801 AF275725 AY034613 NM_001146172 NM_001146173 NM_033438	-52315	-	TSC_hg19_v1_chr1_-_159915401 AB037776 BC030141 NM_001135050 NM_020789 AY358128	-60923	-	TSC_hg19_v1_chr1_-_159895294 BC002616 D21261 GU727636 NM_003564 AK291562 AK298654	-81030	-	CU676470 TSC_hg19_v1_chr1_-_160001654 BC001803	25279	-	AB028127 TSC_hg19_v1_chr1_-_160001781 BC019865 AK074655 BC011395 NM_145167	25437	-	BC131627 BC034036 AK312383 TSC_hg19_v1_chr1_-_160040009 U52155 NM_002241	63681	-	BC074754|SLAMF9|89886|SLAM family member 9##BC070213|SLAMF9|89886|SLAM family member 9##AY358801|SLAMF9|89886|SLAM family member 9##AF275725|SLAMF9|89886|SLAM family member 9##AY034613|SLAMF9|89886|SLAM family member 9##NM_001146172|SLAMF9|89886|SLAM family member 9##NM_001146173|SLAMF9|89886|SLAM family member 9##NM_033438|SLAMF9|89886|SLAM family member 9##AB037776|IGSF9|57549|immunoglobulin superfamily, member 9##BC030141|IGSF9|57549|immunoglobulin superfamily, member 9##NM_001135050|IGSF9|57549|immunoglobulin superfamily, member 9##NM_020789|IGSF9|57549|immunoglobulin superfamily, member 9##AY358128|IGSF9|57549|immunoglobulin superfamily, member 9##BC002616|TAGLN2|8407|transgelin 2##D21261|TAGLN2|8407|transgelin 2##GU727636|TAGLN2|8407|transgelin 2##NM_003564|TAGLN2|8407|transgelin 2##AK291562|TAGLN2|8407|transgelin 2##AK298654|TAGLN2|8407|transgelin 2##BC001803|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AB028127|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC019865|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AK074655|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC011395|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##NM_145167|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC131627|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##BC034036|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##AK312383|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##U52155|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##NM_002241|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10	0.533049	CTCF.p2:-10:0.533
chr10	11514264	11514399	reg1002588.p2	14.520	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-306839	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-306885	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-306906	+	NM_001080491	59942	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	139305	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	270067	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.338961	CTCF.p2:3:0.339
chr5	148120960	148121099	reg1004156.p1	14.520	+	AK308471 TSC_hg19_v1_chr5_-_148034091	-86939	-	AJ131724 TSC_hg19_v1_chr5_-_148033739 NM_000870	-87302	-	AJ633645 AM712912 Y10437 Y13584 AJ011371 BC095497 Y09586 AJ131725 AJ131726 AJ278979 AJ278980 AJ278981 AJ278982 Y08756 Y12505 Y12506 Y12507 AJ519673 BC074755 NM_001040169 NM_001040172 NM_001040173 NM_199453	-104430	-	NM_000024 TSC_hg19_v1_chr5_+_148206185 AK313151 BC012481 AK223025 BC073856 BC063486 X04827	85157	+	AB075865 AL832651 AK300420 TSC_hg19_v1_chr5_-_148442626 BC113879 BC114486 AY341075 AB070620 NM_024577	321642	-	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	400161	+	AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131724|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000870|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface##X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface##AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3	0.514551	CTCF.p2:-7:0.503
chr16	85148652	85148784	reg1002449.p1	14.519	+	BC093665 BC111944 AK126284 NM_198491	-2664	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-87348	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-103589	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	496303	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	498235	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	573824	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	1.149757	CTCF.p2:-11:0.961
chr3	37821169	37821287	reg1002710.p1	14.518	+	TSC_hg19_v1_chr3_+_37493631 BC030198 D25303 NM_002207 L24158	-327474	+	NM_178339 NM_178342 AJ493604 AJ493603	-380214	+	TSC_hg19_v1_chr3_+_37284761 BC045543 NM_001172713 NM_002078 BC050444 AK290550 BC023648 AK300192 AK307429 AB209693 U41740 X82834	-536465	+	TSC_hg19_v1_chr3_+_37903656 AJ575644 AJ575645 NM_001008392 NM_005808 AY279532 AY364238	82438	+	TSC_hg19_v1_chr3_+_38032276 BC004300	211048	+	NM_015873	213849	+	BC030198|ITGA9|3680|integrin, alpha 9##D25303|ITGA9|3680|integrin, alpha 9##NM_002207|ITGA9|3680|integrin, alpha 9##L24158|ITGA9|3680|integrin, alpha 9##NM_178339|C3orf35|339883|chromosome 3 open reading frame 35##NM_178342|C3orf35|339883|chromosome 3 open reading frame 35##AJ493604|C3orf35|339883|chromosome 3 open reading frame 35##AJ493603|C3orf35|339883|chromosome 3 open reading frame 35##BC045543|GOLGA4|2803|golgin A4##NM_001172713|GOLGA4|2803|golgin A4##NM_002078|GOLGA4|2803|golgin A4##BC050444|GOLGA4|2803|golgin A4##AK290550|GOLGA4|2803|golgin A4##BC023648|GOLGA4|2803|golgin A4##AK300192|GOLGA4|2803|golgin A4##AK307429|GOLGA4|2803|golgin A4##AB209693|GOLGA4|2803|golgin A4##U41740|GOLGA4|2803|golgin A4##X82834|GOLGA4|2803|golgin A4##AJ575644|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AJ575645|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_001008392|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_005808|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY279532|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY364238|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##BC004300|VILL|50853|villin-like##NM_015873|VILL|50853|villin-like	0.996207	CTCF.p2:9:0.996
chr15	63581112	63581237	reg1002636.p1	14.517	+	NM_001145646 NM_031301 TSC_hg19_v1_chr15_+_63569803 AK291204 AL136671 BC020905 AB189172 AB197122 AF508794 AX776001 AY358698 AB528062 AM392724 AM392878 DQ891401 CU676772 AK307725	-11361	+	TSC_hg19_v1_chr15_+_63481804 AK001111 AK095444 AK297598 AL833365 BC020654 AB464123 CU676608	-99369	+	TSC_hg19_v1_chr15_+_63481724 NM_016530 AB038995	-99445	+	BT006656 DQ893188 DQ896511 EU831616 EU831623 EU831703 EU831708 AF051882 BC000278 AF037335 BC011691 TSC_hg19_v1_chr15_-_63674046 AK096845 BC023981	92818	-	AK315769 NM_001218 NM_206925 TSC_hg19_v1_chr15_-_63674076	92901	-	TSC_hg19_v1_chr15_+_63796791 AK314223	215608	+	NM_001145646|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##NM_031301|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK291204|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AL136671|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##BC020905|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB189172|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB197122|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AF508794|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AY358698|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392724|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392878|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##DQ891401|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK307725|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK001111|RAB8B|51762|RAB8B, member RAS oncogene family##AK095444|RAB8B|51762|RAB8B, member RAS oncogene family##AK297598|RAB8B|51762|RAB8B, member RAS oncogene family##AL833365|RAB8B|51762|RAB8B, member RAS oncogene family##BC020654|RAB8B|51762|RAB8B, member RAS oncogene family##NM_016530|RAB8B|51762|RAB8B, member RAS oncogene family##AB038995|RAB8B|51762|RAB8B, member RAS oncogene family##BT006656|CA12|771|carbonic anhydrase XII##DQ893188|CA12|771|carbonic anhydrase XII##DQ896511|CA12|771|carbonic anhydrase XII##EU831616|CA12|771|carbonic anhydrase XII##EU831623|CA12|771|carbonic anhydrase XII##EU831703|CA12|771|carbonic anhydrase XII##EU831708|CA12|771|carbonic anhydrase XII##AF051882|CA12|771|carbonic anhydrase XII##BC000278|CA12|771|carbonic anhydrase XII##AF037335|CA12|771|carbonic anhydrase XII##BC011691|CA12|771|carbonic anhydrase XII##AK096845|CA12|771|carbonic anhydrase XII##BC023981|CA12|771|carbonic anhydrase XII##AK315769|CA12|771|carbonic anhydrase XII##NM_001218|CA12|771|carbonic anhydrase XII##NM_206925|CA12|771|carbonic anhydrase XII##AK314223|USP3|9960|ubiquitin specific peptidase 3	0.844368	CTCF.p2:0:0.844
chr2	111056730	111056840	reg1002764.p1	14.517	+	TSC_hg19_v1_chr2_-_110970123 BC031315	-86664	-	AJ001815 BC032939 TSC_hg19_v1_chr2_-_110962582 BX571745 NM_000272 NM_001128178 NM_001128179 NM_207181	-94178	-	AF023674 CU679489 BC062574 TSC_hg19_v1_chr2_-_110962561 BC009789 AK299011 AK225600 AK307654	-94230	-	BC094740 NM_001205288 NM_033514	173866	-	NM_005054 U64675	277892	-	AL136868 NM_001037866 NM_001123363 NM_032260	279523	-	BC031315|LINC00116|205251|long intergenic non-protein coding RNA 116##AJ001815|NPHP1|4867|nephronophthisis 1 (juvenile)##BC032939|NPHP1|4867|nephronophthisis 1 (juvenile)##BX571745|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_000272|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128178|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128179|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_207181|NPHP1|4867|nephronophthisis 1 (juvenile)##AF023674|NPHP1|4867|nephronophthisis 1 (juvenile)##BC062574|NPHP1|4867|nephronophthisis 1 (juvenile)##BC009789|NPHP1|4867|nephronophthisis 1 (juvenile)##AK299011|NPHP1|4867|nephronophthisis 1 (juvenile)##AK225600|NPHP1|4867|nephronophthisis 1 (juvenile)##AK307654|NPHP1|4867|nephronophthisis 1 (juvenile)##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5	1.150366	CTCF.p2:-23:0.818	CTCF.p2:30:0.332
chr3	188672526	188672644	reg1002580.p1	14.516	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-7615	+	NM_001167671 BC130584 BC144076	-729351	+	NM_005578 U49957	-741865	+	AK125682 NM_198485 BC101550 BC101552	217226	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	676674	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	834933	+	AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma##U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63	0.994679	CTCF.p2:4:0.995
chr19	12888523	12888643	reg1002369.p1	14.515	+	TSC_hg19_v1_chr19_-_12886422 NM_001100176 NM_013312	-2156	-	CU680326 DQ891339 DQ893360 DQ894521 DQ896679 AB527820 TSC_hg19_v1_chr19_-_12886342 AF044924 BC012443	-2256	-	AF440756 AY515705 NM_017682 AK000139 AK225232	-25145	+	TSC_hg19_v1_chr19_+_12902286 DQ650707	13707	+	AK222532 TSC_hg19_v1_chr19_+_12902299 AK313737 BC110372 BC004250 BC009465 BC009466 NM_002229 X51345	13730	+	BC000452 BC003022 BC064138 TSC_hg19_v1_chr19_-_12912615 Z22548 AK289485 AK293957 BC039428 AK022395 NM_005809 NM_181738	24081	-	NM_001100176|HOOK2|29911|hook homolog 2 (Drosophila)##NM_013312|HOOK2|29911|hook homolog 2 (Drosophila)##DQ891339|HOOK2|29911|hook homolog 2 (Drosophila)##DQ893360|HOOK2|29911|hook homolog 2 (Drosophila)##DQ894521|HOOK2|29911|hook homolog 2 (Drosophila)##DQ896679|HOOK2|29911|hook homolog 2 (Drosophila)##AF044924|HOOK2|29911|hook homolog 2 (Drosophila)##BC012443|HOOK2|29911|hook homolog 2 (Drosophila)##AF440756|BEST2|54831|bestrophin 2##AY515705|BEST2|54831|bestrophin 2##NM_017682|BEST2|54831|bestrophin 2##AK000139|BEST2|54831|bestrophin 2##AK225232|BEST2|54831|bestrophin 2##AK222532|JUNB|3726|jun B proto-oncogene##AK313737|JUNB|3726|jun B proto-oncogene##BC004250|JUNB|3726|jun B proto-oncogene##BC009465|JUNB|3726|jun B proto-oncogene##BC009466|JUNB|3726|jun B proto-oncogene##NM_002229|JUNB|3726|jun B proto-oncogene##X51345|JUNB|3726|jun B proto-oncogene##BC000452|PRDX2|7001|peroxiredoxin 2##BC003022|PRDX2|7001|peroxiredoxin 2##BC064138|PRDX2|7001|peroxiredoxin 2##Z22548|PRDX2|7001|peroxiredoxin 2##AK289485|PRDX2|7001|peroxiredoxin 2##AK293957|PRDX2|7001|peroxiredoxin 2##BC039428|PRDX2|7001|peroxiredoxin 2##AK022395|PRDX2|7001|peroxiredoxin 2##NM_005809|PRDX2|7001|peroxiredoxin 2##NM_181738|PRDX2|7001|peroxiredoxin 2	0.987256	CTCF.p2:-29:0.987
chr1	39724414	39724551	reg1002768.p1	14.514	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-177394	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	-232474	+	TSC_hg19_v1_chr1_+_39456956 NM_001136275 NM_024595 AK022728 AK092624 AX747634 AK124799 AK126262 AK223276 AK298890 AK303098 BC001498 BC119745 BC119746 AY326465	-267420	+	NM_015038	150693	+	TSC_hg19_v1_chr1_+_39922264 AK023821	197837	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	232863	+	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_001136275|AKIRIN1|79647|akirin 1##NM_024595|AKIRIN1|79647|akirin 1##AK022728|AKIRIN1|79647|akirin 1##AK092624|AKIRIN1|79647|akirin 1##AK124799|AKIRIN1|79647|akirin 1##AK126262|AKIRIN1|79647|akirin 1##AK223276|AKIRIN1|79647|akirin 1##AK298890|AKIRIN1|79647|akirin 1##AK303098|AKIRIN1|79647|akirin 1##BC001498|AKIRIN1|79647|akirin 1##BC119745|AKIRIN1|79647|akirin 1##BC119746|AKIRIN1|79647|akirin 1##AY326465|AKIRIN1|79647|akirin 1##NM_015038|KIAA0754|643314|KIAA0754##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a	0.813456	CTCF.p2:27:0.813
chr14	75413170	75413306	reg1004290.p1	14.514	+	TSC_hg19_v1_chr14_-_75389964 BC036574 AK226137 AK054800	-23285	-	NM_031464	-24094	-	TSC_hg19_v1_chr14_+_75348624 NM_001244883 NM_001933 AK289414 BX248276 AK299505 AK316463 AK300396 BC000302 BC001922 BC002735 BX248764 D16373 CR456727 CU674146 L37418 BX248774	-64613	+	BX248289 NM_001207012 NM_002632	9228	-	NM_014239 TSC_hg19_v1_chr14_+_75469623 BX161473 BC000494 BC003165 AF035280 BC011750 CU680040 DQ891364 DQ894544 L40395	56423	+	AF195657 BC012544 TSC_hg19_v1_chr14_-_75518171 NM_001040108 NM_014381	104945	-	BC036574|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK226137|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK054800|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##NM_031464|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##NM_001244883|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##NM_001933|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK289414|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248276|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK299505|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK316463|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK300396|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC000302|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC001922|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC002735|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248764|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##D16373|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##CR456727|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##L37418|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248774|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248289|PGF|5228|placental growth factor##NM_001207012|PGF|5228|placental growth factor##NM_002632|PGF|5228|placental growth factor##NM_014239|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##BX161473|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##BC000494|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##BC003165|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##AF035280|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##BC011750|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##DQ891364|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##DQ894544|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##L40395|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##AF195657|MLH3|27030|mutL homolog 3 (E. coli)##BC012544|MLH3|27030|mutL homolog 3 (E. coli)##NM_001040108|MLH3|27030|mutL homolog 3 (E. coli)##NM_014381|MLH3|27030|mutL homolog 3 (E. coli)	0.995493	CTCF.p2:0:0.995
chr12	112825265	112825376	reg1002422.p2	14.513	+	TSC_hg19_v1_chr12_-_112819755 NM_001109662	-5495	-	TSC_hg19_v1_chr12_-_112630525 AF174498	-194792	-	TSC_hg19_v1_chr12_+_112563363 AK122620 AK291331 AK295474 AB007447	-261929	+	TSC_hg19_v1_chr12_-_112847411 BC022444 X69391 BC004138 BC104824 BC104826 AK308680 NM_000970 NM_001024662	22085	-	NM_002834 TSC_hg19_v1_chr12_+_112856698	31296	+	TSC_hg19_v1_chr12_+_112856714 BC008692 L08807	31407	+	NM_001109662|C12orf51|283450|chromosome 12 open reading frame 51##AF174498|C12orf51|283450|chromosome 12 open reading frame 51##AK122620|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK291331|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK295474|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AB007447|TRAFD1|10906|TRAF-type zinc finger domain containing 1##BC022444|RPL6|6128|ribosomal protein L6##X69391|RPL6|6128|ribosomal protein L6##BC004138|RPL6|6128|ribosomal protein L6##BC104824|RPL6|6128|ribosomal protein L6##BC104826|RPL6|6128|ribosomal protein L6##NM_000970|RPL6|6128|ribosomal protein L6##NM_001024662|RPL6|6128|ribosomal protein L6##NM_002834|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##BC008692|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##L08807|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11	0.739049	CTCF.p2:11:0.739
chr20	32717558	32717685	reg1002428.p1	14.511	+	TSC_hg19_v1_chr20_-_32700082 NM_003908	-17536	-	AB451237 AB451362 BT009795 CR456734 CU674464 AB590122 TSC_hg19_v1_chr20_-_32700021 AB208966 M29536 BC107588 BC000934 AK313025 BC000461	-17625	-	AK291079 TSC_hg19_v1_chr20_+_32581883 AK291054	-135738	+	NM_001672 BC104238 BC104239	130553	+	BT006697 CU679982 DQ890569 DQ891701 DQ893730 DQ895397 TSC_hg19_v1_chr20_-_32891162 M61832 M61831 BC010018 BC011606 AK300014 AK316180 AK290422 AK309204 NM_000687	173523	-	AK097610 NM_001161766	181986	-	NM_003908|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB451237|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB451362|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BT009795|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##CR456734|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB208966|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##M29536|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC107588|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000934|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AK313025|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000461|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AK291079|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK291054|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##NM_001672|ASIP|434|agouti signaling protein##BC104238|ASIP|434|agouti signaling protein##BC104239|ASIP|434|agouti signaling protein##BT006697|AHCY|191|adenosylhomocysteinase##DQ890569|AHCY|191|adenosylhomocysteinase##DQ891701|AHCY|191|adenosylhomocysteinase##DQ893730|AHCY|191|adenosylhomocysteinase##DQ895397|AHCY|191|adenosylhomocysteinase##M61832|AHCY|191|adenosylhomocysteinase##M61831|AHCY|191|adenosylhomocysteinase##BC010018|AHCY|191|adenosylhomocysteinase##BC011606|AHCY|191|adenosylhomocysteinase##AK300014|AHCY|191|adenosylhomocysteinase##AK316180|AHCY|191|adenosylhomocysteinase##AK290422|AHCY|191|adenosylhomocysteinase##AK309204|AHCY|191|adenosylhomocysteinase##NM_000687|AHCY|191|adenosylhomocysteinase##AK097610|AHCY|191|adenosylhomocysteinase##NM_001161766|AHCY|191|adenosylhomocysteinase	0.989973	CTCF.p2:33:0.990
chr18	33336602	33336751	reg1002525.p1	14.510	+	NM_020474 BC047746 U41514 AB529022 X85018	-102097	+	AK095502 AK300660 BC039404 NM_001098817 NM_194281	-258751	-	BC130288 BC136314 AF492004 AF533251 AK055775 NM_145756	-379383	-	NM_001201474 NM_001201475 NM_001201476 NM_031446 BC108730 TSC_hg19_v1_chr18_+_33552656 BC119765 BC119766 AK311536 AF277182 AF277189 BC025950	215991	+	TSC_hg19_v1_chr18_-_33647515 DQ892910 EU176720 AF419845 NM_018170 BC000225 AK314569	310751	-	BC010136 TSC_hg19_v1_chr18_-_33647520	310843	-	NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##AK095502|INO80C|125476|INO80 complex subunit C##AK300660|INO80C|125476|INO80 complex subunit C##BC039404|INO80C|125476|INO80 complex subunit C##NM_001098817|INO80C|125476|INO80 complex subunit C##NM_194281|INO80C|125476|INO80 complex subunit C##BC130288|ZNF396|252884|zinc finger protein 396##BC136314|ZNF396|252884|zinc finger protein 396##AF492004|ZNF396|252884|zinc finger protein 396##AF533251|ZNF396|252884|zinc finger protein 396##AK055775|ZNF396|252884|zinc finger protein 396##NM_145756|ZNF396|252884|zinc finger protein 396##NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21##NM_031446|C18orf21|83608|chromosome 18 open reading frame 21##BC108730|C18orf21|83608|chromosome 18 open reading frame 21##BC119765|C18orf21|83608|chromosome 18 open reading frame 21##BC119766|C18orf21|83608|chromosome 18 open reading frame 21##AF277182|C18orf21|83608|chromosome 18 open reading frame 21##AF277189|C18orf21|83608|chromosome 18 open reading frame 21##BC025950|C18orf21|83608|chromosome 18 open reading frame 21##DQ892910|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##EU176720|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AF419845|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##NM_018170|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC000225|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK314569|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC010136|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A	0.998899	CTCF.p2:-15:0.999
chr4	57410821	57410955	reg1003594.p1	14.509	+	AY439003 NM_206919	-39514	+	TSC_hg19_v1_chr4_+_57333798 BC040134 BX537991 AF038851 BC046143 BC065018 AF069765 BC032609 AK225430 AK307397 AB590681 AF077019	-77098	+	TSC_hg19_v1_chr4_+_57333762 NM_006947 BC017057 BC056901 BC105583	-77127	+	AB019573 AB463756 AM393649 DQ892193 EU176669 TSC_hg19_v1_chr4_-_57522247	111269	-	BC014225 AB059410 TSC_hg19_v1_chr4_-_57522645 AF492680 AF492681 NM_001145459 NM_139211	111690	-	AF492675 NM_001145460 NM_032495 NM_139212	136970	-	AY439003|ARL9|132946|ADP-ribosylation factor-like 9##NM_206919|ARL9|132946|ADP-ribosylation factor-like 9##BC040134|SRP72|6731|signal recognition particle 72kDa##BX537991|SRP72|6731|signal recognition particle 72kDa##AF038851|SRP72|6731|signal recognition particle 72kDa##BC046143|SRP72|6731|signal recognition particle 72kDa##BC065018|SRP72|6731|signal recognition particle 72kDa##AF069765|SRP72|6731|signal recognition particle 72kDa##BC032609|SRP72|6731|signal recognition particle 72kDa##AK225430|SRP72|6731|signal recognition particle 72kDa##AK307397|SRP72|6731|signal recognition particle 72kDa##AF077019|SRP72|6731|signal recognition particle 72kDa##NM_006947|SRP72|6731|signal recognition particle 72kDa##BC017057|SRP72|6731|signal recognition particle 72kDa##BC056901|SRP72|6731|signal recognition particle 72kDa##BC105583|SRP72|6731|signal recognition particle 72kDa##AB019573|HOPX|84525|HOP homeobox##AM393649|HOPX|84525|HOP homeobox##DQ892193|HOPX|84525|HOP homeobox##EU176669|HOPX|84525|HOP homeobox##BC014225|HOPX|84525|HOP homeobox##AB059410|HOPX|84525|HOP homeobox##AF492680|HOPX|84525|HOP homeobox##AF492681|HOPX|84525|HOP homeobox##NM_001145459|HOPX|84525|HOP homeobox##NM_139211|HOPX|84525|HOP homeobox##AF492675|HOPX|84525|HOP homeobox##NM_001145460|HOPX|84525|HOP homeobox##NM_032495|HOPX|84525|HOP homeobox##NM_139212|HOPX|84525|HOP homeobox	0.998167	CTCF.p2:-6:0.998
chr1	101823050	101823193	reg1002731.p2	14.508	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-120551	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-120740	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-331688	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	639366	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	639669	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1673662	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.959368	CTCF.p2:2:0.940
chr15	56538324	56538467	reg1002267.p1	14.507	+	TSC_hg19_v1_chr15_-_56535479 NM_022841	-2913	-	TSC_hg19_v1_chr15_-_56388663 AL832584	-149698	-	TSC_hg19_v1_chr15_-_56285776 BC035707 AK304394 AY550969 BC152452 BC152562 D42055 NM_006154	-252600	-	TSC_hg19_v1_chr15_+_56657623 AK294960 BC028119 NM_198524 AL832050	119234	+	TSC_hg19_v1_chr15_-_56757262 BC031046 AK310029 BC012554 BC034991 AK002084 NM_018365	218891	-	TSC_hg19_v1_chr15_-_57025690 AB046804 BC053649 BC064359 AK310882 AK289739 BC130451 BC136412	487317	-	NM_022841|RFX7|64864|regulatory factor X, 7##AL832584|RFX7|64864|regulatory factor X, 7##BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK294960|TEX9|374618|testis expressed 9##BC028119|TEX9|374618|testis expressed 9##NM_198524|TEX9|374618|testis expressed 9##AL832050|TEX9|374618|testis expressed 9##BC031046|MNS1|55329|meiosis-specific nuclear structural 1##BC012554|MNS1|55329|meiosis-specific nuclear structural 1##BC034991|MNS1|55329|meiosis-specific nuclear structural 1##AK002084|MNS1|55329|meiosis-specific nuclear structural 1##NM_018365|MNS1|55329|meiosis-specific nuclear structural 1##AB046804|ZNF280D|54816|zinc finger protein 280D##BC053649|ZNF280D|54816|zinc finger protein 280D##BC064359|ZNF280D|54816|zinc finger protein 280D##AK310882|ZNF280D|54816|zinc finger protein 280D##AK289739|ZNF280D|54816|zinc finger protein 280D##BC130451|ZNF280D|54816|zinc finger protein 280D##BC136412|ZNF280D|54816|zinc finger protein 280D	1.846824	CTCF.p2:-5:0.856	CTCF.p2:29:0.991
chr16	67962499	67962621	reg1003668.p1	14.507	+	TSC_hg19_v1_chr16_+_67927174 AK309272 NM_006742 BC062616 AJ272212	-35338	+	AY358782 NM_198443 BC100863 BC100864 BC100865 BC100866	-43780	+	TSC_hg19_v1_chr16_+_67907132 AK291049 AK302563	-55362	+	CU687738 BC063475 AK223172 X71877 BC039716 NM_001907	3205	-	AB464083 BT019723 BT019724 CR456982 CU690910 BC052369 BC017198 TSC_hg19_v1_chr16_-_67970733	8132	-	TSC_hg19_v1_chr16_-_67970754 AK312208 Y13640 AK225658 AK298012 NM_002801	8196	-	AK309272|PSKH1|5681|protein serine kinase H1##NM_006742|PSKH1|5681|protein serine kinase H1##BC062616|PSKH1|5681|protein serine kinase H1##AJ272212|PSKH1|5681|protein serine kinase H1##AY358782|NRN1L|123904|neuritin 1-like##NM_198443|NRN1L|123904|neuritin 1-like##BC100863|NRN1L|123904|neuritin 1-like##BC100864|NRN1L|123904|neuritin 1-like##BC100865|NRN1L|123904|neuritin 1-like##BC100866|NRN1L|123904|neuritin 1-like##AK291049|EDC4|23644|enhancer of mRNA decapping 4##AK302563|EDC4|23644|enhancer of mRNA decapping 4##BC063475|CTRL|1506|chymotrypsin-like##AK223172|CTRL|1506|chymotrypsin-like##X71877|CTRL|1506|chymotrypsin-like##BC039716|CTRL|1506|chymotrypsin-like##NM_001907|CTRL|1506|chymotrypsin-like##BT019723|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BT019724|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##CR456982|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BC052369|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BC017198|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##AK312208|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##Y13640|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##AK225658|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##AK298012|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##NM_002801|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10	0.903867	CTCF.p2:3:0.904
chr11	15230299	15230399	reg1003245.p1	14.504	+	AB236158 NM_001042536	-93866	+	AB236159 NM_001031853	-96380	+	BC008428 AK291188 BC092468 NM_000728	-135223	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	1194052	-	BC037866 NM_001145811	1200078	-	AF309034 NM_033326	1267576	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	0.976222	CTCF.p2:9:0.976
chr2	29181622	29181762	reg1003541.p1	14.503	+	TSC_hg19_v1_chr2_+_29117555 NM_015131 D26488	-64154	+	AK225551 CU674472 CU679681 TSC_hg19_v1_chr2_-_29093160 AK308821 BC010365 AL136689 BC000952 AK000635 AK225524 NM_017910	-88533	-	NM_001008779 AB590634 AY820303 AY820304	-142821	+	AK296977 NM_199280	22471	+	NM_001029883	115434	-	TSC_hg19_v1_chr2_+_29338370 BC013862 NM_024692 AL834443	156663	+	NM_015131|WDR43|23160|WD repeat domain 43##D26488|WDR43|23160|WD repeat domain 43##AK225551|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##BC010365|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##AL136689|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##BC000952|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##AK225524|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##NM_017910|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)##AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)##AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)##AK296977|FAM179A|165186|family with sequence similarity 179, member A##NM_199280|FAM179A|165186|family with sequence similarity 179, member A##NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71##BC013862|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_024692|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##AL834443|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4	0.689215	CTCF.p2:-23:0.689
chr7	39620142	39620280	reg1003739.p1	14.502	+	TSC_hg19_v1_chr7_+_39606002 AK314937 NM_020192 AK293511 AF226046 BC022043 CR457198 DQ892829 DQ896074 DQ896075	-14242	+	NM_001166018 NM_007252	-602603	+	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	-671418	-	TSC_hg19_v1_chr7_+_39663159 NM_005402	42955	+	TSC_hg19_v1_chr7_+_39663204 BC039858	43000	+	TSC_hg19_v1_chr7_+_39663298 AK308109	43097	+	AK314937|YAE1D1|57002|Yae1 domain containing 1##NM_020192|YAE1D1|57002|Yae1 domain containing 1##AF226046|YAE1D1|57002|Yae1 domain containing 1##BC022043|YAE1D1|57002|Yae1 domain containing 1##CR457198|YAE1D1|57002|Yae1 domain containing 1##DQ892829|YAE1D1|57002|Yae1 domain containing 1##DQ896074|YAE1D1|57002|Yae1 domain containing 1##DQ896075|YAE1D1|57002|Yae1 domain containing 1##NM_001166018|POU6F2|11281|POU class 6 homeobox 2##NM_007252|POU6F2|11281|POU class 6 homeobox 2##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_005402|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##AK308109|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)	0.98508	CTCF.p2:-14:0.985
chr9	114061725	114061849	reg1002441.p1	14.502	+	TSC_hg19_v1_chr9_-_113801481 AK290287	-260285	-	AK298590 TSC_hg19_v1_chr9_-_113801086	-260754	-	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	-261375	-	BC111086 NM_205859	28925	-	TSC_hg19_v1_chr9_-_114245830 AK308313	184041	-	TSC_hg19_v1_chr9_-_114246233 AK122712	184478	-	AK290287|LPAR1|1902|lysophosphatidic acid receptor 1##AK298590|LPAR1|1902|lysophosphatidic acid receptor 1##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1##BC111086|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2##NM_205859|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2##AK308313|KIAA0368|23392|KIAA0368##AK122712|KIAA0368|23392|KIAA0368	0.982011	CTCF.p2:33:0.982
chr14	94952719	94952828	reg1002546.p2	14.501	+	AY358700 AY220120 AY220119 AK301082 BC111498 AY220121 AY220118 AY185496 AY185497 NM_001042518 NM_175739	-10182	-	BC146962 BX248259 NM_001080451	-33670	-	TSC_hg19_v1_chr14_-_94856973 BX161449 BX247968 AK315637 X05826 X05827 NM_001002235 NM_001002236 NM_001127700 NM_001127701 NM_001127702 NM_001127703 NM_001127704 NM_001127705 NM_001127706 NM_001127707	-95782	-	BC040857 NM_173850	31407	-	TSC_hg19_v1_chr14_+_95027778 AK309586 AK313196 BC014992 NM_006215 BX248760 BX248009	75027	+	NM_000624 TSC_hg19_v1_chr14_+_95047736 AK310869	94960	+	AY358700|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220120|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220119|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AK301082|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC111498|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220121|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220118|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185496|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185497|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_001042518|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_175739|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC146962|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##BX248259|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##NM_001080451|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##BX161449|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BX247968|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##AK315637|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X05826|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X05827|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001002235|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001002236|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127700|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127701|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127702|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127703|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127704|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127705|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127706|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127707|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC040857|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12##NM_173850|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12##AK309586|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##AK313196|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##BC014992|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##NM_006215|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##BX248760|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##BX248009|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##NM_000624|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##AK310869|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5	0.999939	CTCF.p2:5:1.000
chr6	35265480	35265597	reg1003146.p1	14.501	+	TSC_hg19_v1_chr6_+_35227490 AK294605 BC002549 NM_003427 BC000133 M91592	-38011	+	TSC_hg19_v1_chr6_+_35227309 AK310877	-38232	+	TSC_hg19_v1_chr6_+_35227286 AK295276 AK302903	-38277	+	AK093613 AY241694 NM_022047 TSC_hg19_v1_chr6_+_35265594 AK314756 BC017504 AB527549 AJ276095	76	+	TSC_hg19_v1_chr6_+_35265672 BC007702	129	+	TSC_hg19_v1_chr6_+_35310334 NM_001171818 NM_001171819 NM_001171820 NM_006238 NM_177435	44788	+	AK294605|ZNF76|7629|zinc finger protein 76##BC002549|ZNF76|7629|zinc finger protein 76##NM_003427|ZNF76|7629|zinc finger protein 76##BC000133|ZNF76|7629|zinc finger protein 76##M91592|ZNF76|7629|zinc finger protein 76##AK310877|ZNF76|7629|zinc finger protein 76##AK295276|ZNF76|7629|zinc finger protein 76##AK302903|ZNF76|7629|zinc finger protein 76##AK093613|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AY241694|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##NM_022047|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AK314756|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##BC017504|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AJ276095|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##BC007702|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##NM_001171818|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_001171819|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_001171820|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_006238|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_177435|PPARD|5467|peroxisome proliferator-activated receptor delta	0.057679	
chr20	22319878	22320005	reg1003602.p1	14.500	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	-633408	+	TSC_hg19_v1_chr20_+_21686296 NM_006192	-633647	+	NM_002509	-825278	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	244975	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	245134	-	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	246161	-	BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1##NM_006192|PAX1|5075|paired box 1##NM_002509|NKX2-2|4821|NK2 homeobox 2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2	0.071147	
chr11	66462267	66462396	reg1002477.p1	14.499	+	TSC_hg19_v1_chr11_-_66445331 BC003503	-16974	-	AK095158 BC004951 NM_031492 TSC_hg19_v1_chr11_-_66445302	-17070	-	BC000307 BC064960 TSC_hg19_v1_chr11_+_66406199 U89505	-56136	+	AB464240 BC139788 AB008567 NM_006946	26459	-	TSC_hg19_v1_chr11_+_66512221 BC028240 NM_024650	49870	+	TSC_hg19_v1_chr11_+_66512242 AK302025	49969	+	BC003503|RBM4B|83759|RNA binding motif protein 4B##AK095158|RBM4B|83759|RNA binding motif protein 4B##BC004951|RBM4B|83759|RNA binding motif protein 4B##NM_031492|RBM4B|83759|RNA binding motif protein 4B##BC000307|RBM4|5936|RNA binding motif protein 4##BC064960|RBM4|5936|RNA binding motif protein 4##U89505|RBM4|5936|RNA binding motif protein 4##BC139788|SPTBN2|6712|spectrin, beta, non-erythrocytic 2##AB008567|SPTBN2|6712|spectrin, beta, non-erythrocytic 2##NM_006946|SPTBN2|6712|spectrin, beta, non-erythrocytic 2##BC028240|C11orf80|79703|chromosome 11 open reading frame 80##NM_024650|C11orf80|79703|chromosome 11 open reading frame 80##AK302025|C11orf80|79703|chromosome 11 open reading frame 80	0.993316	CTCF.p2:-23:0.993
chr3	102392489	102392609	reg1002722.p1	14.499	+	AY090780 NM_175056 BC143817	-238682	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-824175	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-845589	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	2693031	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	2693273	+	CR749655 TSC_hg19_v1_chr3_-_105421064	3028505	-	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.999614	CTCF.p2:-14:1.000
chr5	169766010	169766142	reg1002701.p1	14.499	+	TSC_hg19_v1_chr5_-_169724821 NM_005565	-41225	-	AK292890 TSC_hg19_v1_chr5_-_169724784 AK300000	-41278	-	TSC_hg19_v1_chr5_-_169724734 BC016618 AK310369	-41321	-	DQ148476 NM_001034838	14804	+	TSC_hg19_v1_chr5_+_169816493 AK311026	50420	+	BC025707 NM_004137 AK313979	50571	-	NM_005565|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK292890|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK300000|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ148476|KCNIP1|30820|Kv channel interacting protein 1##NM_001034838|KCNIP1|30820|Kv channel interacting protein 1##BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1	0.630925	CTCF.p2:39:0.486
chr6	167596509	167596631	reg1002948.p1	14.499	+	NM_001145121	-12490	+	BC095537 NM_005299	-25254	-	NM_031409 U68031 U68030	-60321	+	AK091987 AX747293 NM_001143947 NM_018974 AJ422141 AJ508812 BC098248 BC099718 BC105635	108306	+	AK093039 AK225984 AX747876 NM_031949 BC030650 AK301755 BC047411 AK314450 AY026506 CU688966 CU690408	142047	+	BC068592 U03399 BC063451 BC033909 BC034995 NM_004610	201387	-	NM_001145121|TCP10L2|401285|t-complex 10-like 2 (mouse)##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##AK091987|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_001143947|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_018974|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ422141|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ508812|UNC93A|54346|unc-93 homolog A (C. elegans)##BC098248|UNC93A|54346|unc-93 homolog A (C. elegans)##BC099718|UNC93A|54346|unc-93 homolog A (C. elegans)##BC105635|UNC93A|54346|unc-93 homolog A (C. elegans)##AK093039|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK225984|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##NM_031949|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC030650|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK301755|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC047411|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK314450|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AY026506|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC068592|TCP10|6953|t-complex 10 homolog (mouse)##U03399|TCP10|6953|t-complex 10 homolog (mouse)##BC063451|TCP10|6953|t-complex 10 homolog (mouse)##NM_004610|TCP10|6953|t-complex 10 homolog (mouse)	0.998602	CTCF.p2:3:0.999
chr1	26611707	26611828	reg1003128.p2	14.498	+	TSC_hg19_v1_chr1_+_26606633 DQ893377 DQ896698	-5136	+	TSC_hg19_v1_chr1_+_26606589 AK024884 AF304163	-5169	+	TSC_hg19_v1_chr1_+_26606583 AJ297915	-5186	+	AY007163 TSC_hg19_v1_chr1_-_26633128 AF521018 AK291503 AF520989 AF521017 AK090792 AX746618 AK293910 CR749413 AK094198 AK296179 BX647774 BX648412 BC038106 AK093258 AX748018 NM_001077262 NM_183008	21385	-	TSC_hg19_v1_chr1_+_26644396 NM_001803 AK311554	32633	+	TSC_hg19_v1_chr1_+_26644458 BC000644 X62466 X67699 BT007116 CR456874	32716	+	DQ893377|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##DQ896698|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AK024884|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AF304163|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AJ297915|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AY007163|UBXN11|91544|UBX domain protein 11##AF521018|UBXN11|91544|UBX domain protein 11##AK291503|UBXN11|91544|UBX domain protein 11##AF520989|UBXN11|91544|UBX domain protein 11##AF521017|UBXN11|91544|UBX domain protein 11##AK090792|UBXN11|91544|UBX domain protein 11##AK293910|UBXN11|91544|UBX domain protein 11##CR749413|UBXN11|91544|UBX domain protein 11##AK094198|UBXN11|91544|UBX domain protein 11##AK296179|UBXN11|91544|UBX domain protein 11##BX647774|UBXN11|91544|UBX domain protein 11##BX648412|UBXN11|91544|UBX domain protein 11##BC038106|UBXN11|91544|UBX domain protein 11##AK093258|UBXN11|91544|UBX domain protein 11##NM_001077262|UBXN11|91544|UBX domain protein 11##NM_183008|UBXN11|91544|UBX domain protein 11##NM_001803|CD52|1043|CD52 molecule##BC000644|CD52|1043|CD52 molecule##X62466|CD52|1043|CD52 molecule##X67699|CD52|1043|CD52 molecule##BT007116|CD52|1043|CD52 molecule##CR456874|CD52|1043|CD52 molecule	0.999119	CTCF.p2:-15:0.999
chr3	181427452	181427576	reg1003709.p1	14.497	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-10122	+	NM_001190233 TSC_hg19_v1_chr3_-_180707525 AK311765 BC073989 BC009702 AK309019 AK307097 NM_145261	-720081	-	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	-797036	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	2199	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	2624	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	1083773	+	BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##NM_001190233|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK311765|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC073989|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC009702|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK307097|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##NM_145261|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B	0.997657	CTCF.p2:-20:0.998
chr1	38068848	38068984	reg1003931.p1	14.496	+	TSC_hg19_v1_chr1_-_38061544 NM_013285	-7352	-	BC000107 BC009250 TSC_hg19_v1_chr1_-_38061537 AK307352 AK298358 AK312915	-7385	-	CU674042 CU679273 DQ892183 EU176692 TSC_hg19_v1_chr1_-_38061508 L05425	-7446	-	DQ318235 AK098225 DQ165084 DQ165085 TSC_hg19_v1_chr1_-_38100359	31407	-	TSC_hg19_v1_chr1_-_38100578 NM_001038633 NM_001242908 NM_001242909 NM_001242910	31691	-	TSC_hg19_v1_chr1_-_38156198 AK316093 AK299377 BC063843 AK000515 NM_017850	87265	-	NM_013285|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##BC000107|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##BC009250|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##AK307352|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##AK298358|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##AK312915|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##DQ892183|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##EU176692|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##L05425|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##DQ318235|RSPO1|284654|R-spondin 1##AK098225|RSPO1|284654|R-spondin 1##DQ165084|RSPO1|284654|R-spondin 1##DQ165085|RSPO1|284654|R-spondin 1##NM_001038633|RSPO1|284654|R-spondin 1##NM_001242908|RSPO1|284654|R-spondin 1##NM_001242909|RSPO1|284654|R-spondin 1##NM_001242910|RSPO1|284654|R-spondin 1##AK316093|C1orf109|54955|chromosome 1 open reading frame 109##AK299377|C1orf109|54955|chromosome 1 open reading frame 109##BC063843|C1orf109|54955|chromosome 1 open reading frame 109##AK000515|C1orf109|54955|chromosome 1 open reading frame 109##NM_017850|C1orf109|54955|chromosome 1 open reading frame 109	0.94845	CTCF.p2:-2:0.948
chr19	42455879	42456022	reg1002703.p1	14.493	+	NM_199002 TSC_hg19_v1_chr19_+_42388510 BC034013 BC067262	-67464	+	TSC_hg19_v1_chr19_+_42387309 U64105	-68632	+	BC064996 TSC_hg19_v1_chr19_+_42387266 NM_004706 NM_198977 BC011726	-68673	+	AF112996 BT019964 CR457214 CR542116 AB590878 AF112202 AJ133534 BC008950 TSC_hg19_v1_chr19_-_42463499	7518	-	TSC_hg19_v1_chr19_-_42463500 NM_006423	7570	-	AK295833 TSC_hg19_v1_chr19_-_42498254	42287	-	NM_199002|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC034013|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC067262|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##U64105|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC064996|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_004706|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_198977|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC011726|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)##BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)##CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)##CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)##AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)##AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)##BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)##NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)##AK295833|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide	0.999271	CTCF.p2:25:0.999
chr8	86209750	86209852	reg1001900.p1	14.493	+	TSC_hg19_v1_chr8_+_86158033 CU690924	-51752	+	TSC_hg19_v1_chr8_+_86158005 AK095314	-51796	+	TSC_hg19_v1_chr8_+_86157743 BC052602	-52058	+	CU693312 DQ890930 DQ894091 X05014 NM_001164830	44101	-	BC027890 NM_001128829 NM_001128830 NM_001128831 NM_001738	80536	-	AK096880 NM_005181 TSC_hg19_v1_chr8_+_86351055 AK300670 AK300677 AK313254 BC004897 CU678792	141295	+	AK095314|CA13|377677|carbonic anhydrase XIII##BC052602|CA13|377677|carbonic anhydrase XIII##DQ890930|CA1|759|carbonic anhydrase I##DQ894091|CA1|759|carbonic anhydrase I##X05014|CA1|759|carbonic anhydrase I##NM_001164830|CA1|759|carbonic anhydrase I##BC027890|CA1|759|carbonic anhydrase I##NM_001128829|CA1|759|carbonic anhydrase I##NM_001128830|CA1|759|carbonic anhydrase I##NM_001128831|CA1|759|carbonic anhydrase I##NM_001738|CA1|759|carbonic anhydrase I##AK096880|CA3|761|carbonic anhydrase III, muscle specific##NM_005181|CA3|761|carbonic anhydrase III, muscle specific##AK300670|CA3|761|carbonic anhydrase III, muscle specific##AK300677|CA3|761|carbonic anhydrase III, muscle specific##AK313254|CA3|761|carbonic anhydrase III, muscle specific##BC004897|CA3|761|carbonic anhydrase III, muscle specific	1.0095	CTCF.p2:-1:0.995
chr7	76876660	76876785	reg1003004.p1	14.492	+	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	-47586	-	BC036053 NM_020879 BX649000 AK292491 HM370402	-124776	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-620175	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	168996	-	TSC_hg19_v1_chr7_+_77166392 BC050008	289656	+	TSC_hg19_v1_chr7_+_77166764 NM_002835 AB209524 AK314236 AK289573 M93425 D13380 AB384966	290084	+	GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)##BC050008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_002835|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AB209524|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK314236|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK289573|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##M93425|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##D13380|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	0.99868	CTCF.p2:-2:0.999
chr3	137771142	137771279	reg1003567.p1	14.488	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	-42207	+	AK098474 NM_001002026 AF349452	-53531	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	-288063	+	AK057406 NM_001170538	61111	-	BC033308 NM_173543 TSC_hg19_v1_chr3_-_137834481	63265	-	BC119639 BC119640 AF141315 AK225668 NM_016161	79965	-	AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK057406|DZIP1L|199221|DAZ interacting protein 1-like##NM_001170538|DZIP1L|199221|DAZ interacting protein 1-like##BC033308|DZIP1L|199221|DAZ interacting protein 1-like##NM_173543|DZIP1L|199221|DAZ interacting protein 1-like##BC119639|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##BC119640|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##AF141315|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##AK225668|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##NM_016161|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase	0.234518	CTCF.p2:15:0.235
chr19	12907461	12907577	reg1002327.p2	14.486	+	AK222532 TSC_hg19_v1_chr19_+_12902299 AK313737 BC110372 BC004250 BC009465 BC009466 NM_002229 X51345	-5206	+	TSC_hg19_v1_chr19_+_12902286 DQ650707	-5229	+	TSC_hg19_v1_chr19_-_12886422 NM_001100176 NM_013312	-21092	-	BC000452 BC003022 BC064138 TSC_hg19_v1_chr19_-_12912615 Z22548 AK289485 AK293957 BC039428 AK022395 NM_005809 NM_181738	5145	-	TSC_hg19_v1_chr19_+_12917397 AK315327	9878	+	TSC_hg19_v1_chr19_+_12917432 NM_006397 BC011748 AY363912 Z97029 CR456841	9929	+	AK222532|JUNB|3726|jun B proto-oncogene##AK313737|JUNB|3726|jun B proto-oncogene##BC004250|JUNB|3726|jun B proto-oncogene##BC009465|JUNB|3726|jun B proto-oncogene##BC009466|JUNB|3726|jun B proto-oncogene##NM_002229|JUNB|3726|jun B proto-oncogene##X51345|JUNB|3726|jun B proto-oncogene##NM_001100176|HOOK2|29911|hook homolog 2 (Drosophila)##NM_013312|HOOK2|29911|hook homolog 2 (Drosophila)##BC000452|PRDX2|7001|peroxiredoxin 2##BC003022|PRDX2|7001|peroxiredoxin 2##BC064138|PRDX2|7001|peroxiredoxin 2##Z22548|PRDX2|7001|peroxiredoxin 2##AK289485|PRDX2|7001|peroxiredoxin 2##AK293957|PRDX2|7001|peroxiredoxin 2##BC039428|PRDX2|7001|peroxiredoxin 2##AK022395|PRDX2|7001|peroxiredoxin 2##NM_005809|PRDX2|7001|peroxiredoxin 2##NM_181738|PRDX2|7001|peroxiredoxin 2##AK315327|RNASEH2A|10535|ribonuclease H2, subunit A##NM_006397|RNASEH2A|10535|ribonuclease H2, subunit A##BC011748|RNASEH2A|10535|ribonuclease H2, subunit A##AY363912|RNASEH2A|10535|ribonuclease H2, subunit A##Z97029|RNASEH2A|10535|ribonuclease H2, subunit A##CR456841|RNASEH2A|10535|ribonuclease H2, subunit A	0.494254	CTCF.p2:10:0.494
chr10	7567500	7567643	reg1002226.p2	14.482	+	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	-114137	-	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	-116321	-	TSC_hg19_v1_chr10_+_6622460 AY007155	-945091	+	AK027849 TSC_hg19_v1_chr10_-_7659249	91646	-	BC004282 NM_032817	94053	-	AK027831 AB075833 TSC_hg19_v1_chr10_-_7682819	115209	-	BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##AY007155|LOC439949|439949|uncharacterized LOC439949##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC004282|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_032817|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK027831|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AB075833|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.966125	CTCF.p2:-10:0.966
chr2	20155718	20155845	reg1002476.p2	14.482	+	CU691276 BC070381 TSC_hg19_v1_chr2_-_20101717 BC057850 NM_001008237	-54100	-	TSC_hg19_v1_chr2_-_20101456 BC050088	-54353	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	-87146	+	AB385451 AK122917 AK315094 BC036659 NM_001006657 NM_020779 AB037757 TSC_hg19_v1_chr2_-_20189911	34062	-	AJ224741 BC139907 TSC_hg19_v1_chr2_-_20212430 EU541440	56639	-	TSC_hg19_v1_chr2_-_20212456 AK290856 NM_002381	56684	-	BC070381|TTC32|130502|tetratricopeptide repeat domain 32##BC057850|TTC32|130502|tetratricopeptide repeat domain 32##NM_001008237|TTC32|130502|tetratricopeptide repeat domain 32##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946##AK122917|WDR35|57539|WD repeat domain 35##AK315094|WDR35|57539|WD repeat domain 35##BC036659|WDR35|57539|WD repeat domain 35##NM_001006657|WDR35|57539|WD repeat domain 35##NM_020779|WDR35|57539|WD repeat domain 35##AB037757|WDR35|57539|WD repeat domain 35##AJ224741|MATN3|4148|matrilin 3##BC139907|MATN3|4148|matrilin 3##EU541440|MATN3|4148|matrilin 3##AK290856|MATN3|4148|matrilin 3##NM_002381|MATN3|4148|matrilin 3	0.266339	
chr6	155569669	155569793	reg1002174.p2	14.482	+	NM_001010927 AK299723 BC066979 AF120324 BC022469	-31603	+	NM_012454	-158309	+	TSC_hg19_v1_chr6_+_155054812 AB029039	-514906	+	BC020838 NM_001001346	15415	+	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	65854	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	65892	-	NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##NM_012454|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AB029039|SCAF8|22828|SR-related CTD-associated factor 8##BC020838|CLDN20|49861|claudin 20##NM_001001346|CLDN20|49861|claudin 20##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial	0.610933	CTCF.p2:6:0.611
chr17	56381765	56381893	reg1003422.p1	14.481	+	J02694 X04876 M19507 NM_000250 TSC_hg19_v1_chr17_-_56358297	-23530	-	TSC_hg19_v1_chr17_-_56358164 BC130476	-23664	-	HQ258645 S56200 TSC_hg19_v1_chr17_-_56358145	-23697	-	AB014512 BC150279 NM_004758 NM_024418	24306	-	TSC_hg19_v1_chr17_+_56406294 AK311311 AK311208	24505	+	AX721088 TSC_hg19_v1_chr17_-_56409882	28048	-	J02694|MPO|4353|myeloperoxidase##X04876|MPO|4353|myeloperoxidase##M19507|MPO|4353|myeloperoxidase##NM_000250|MPO|4353|myeloperoxidase##BC130476|MPO|4353|myeloperoxidase##HQ258645|MPO|4353|myeloperoxidase##S56200|MPO|4353|myeloperoxidase##AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##AK311311|LOC100506779|100506779|uncharacterized LOC100506779##AK311208|LOC100506779|100506779|uncharacterized LOC100506779	0.971831	CTCF.p2:0:0.972
chr1	18924031	18924165	reg1004514.p1	14.480	+	NM_152375	-116675	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	-489821	+	AK057339 NM_030812 BC028909 U20582	-842252	+	NM_001135254 NM_002584 NM_013945 X96743	33401	+	NM_152232 AB527225	262057	-	AK294552 NM_001161504	293286	-	NM_152375|KLHDC7A|127707|kelch domain containing 7A##AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1	0.965098	CTCF.p2:-14:0.965
chr15	34502336	34502462	reg1002401.p2	14.478	+	BC037234 TSC_hg19_v1_chr15_-_34502298 AL833631 AK293695 AK311338 NM_024713	-98	-	BC026234 AL136908 TSC_hg19_v1_chr15_-_34502237 AK293021 BC111000 AK297904	-174	-	AK057200 NM_152595 BC130441	-108118	+	TSC_hg19_v1_chr15_+_34517216 AK290524 AK075227 AK296184 BC016348 BC002583 AF151018 NM_016454 AY336092	14841	+	BC126241 BC126243 AF108831 TSC_hg19_v1_chr15_-_34610989 AK315283 NM_005135	108579	-	AF105366 AF531258 NM_001042497 NM_133647	126645	-	BC037234|C15orf29|79768|chromosome 15 open reading frame 29##AL833631|C15orf29|79768|chromosome 15 open reading frame 29##AK293695|C15orf29|79768|chromosome 15 open reading frame 29##AK311338|C15orf29|79768|chromosome 15 open reading frame 29##NM_024713|C15orf29|79768|chromosome 15 open reading frame 29##BC026234|C15orf29|79768|chromosome 15 open reading frame 29##AL136908|C15orf29|79768|chromosome 15 open reading frame 29##AK293021|C15orf29|79768|chromosome 15 open reading frame 29##BC111000|C15orf29|79768|chromosome 15 open reading frame 29##AK297904|C15orf29|79768|chromosome 15 open reading frame 29##AK057200|PGBD4|161779|piggyBac transposable element derived 4##NM_152595|PGBD4|161779|piggyBac transposable element derived 4##BC130441|PGBD4|161779|piggyBac transposable element derived 4##AK290524|TMEM85|51234|transmembrane protein 85##AK075227|TMEM85|51234|transmembrane protein 85##BC016348|TMEM85|51234|transmembrane protein 85##BC002583|TMEM85|51234|transmembrane protein 85##AF151018|TMEM85|51234|transmembrane protein 85##NM_016454|TMEM85|51234|transmembrane protein 85##AY336092|TMEM85|51234|transmembrane protein 85##BC126241|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##BC126243|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AF108831|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AK315283|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##NM_005135|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AF105366|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AF531258|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##NM_001042497|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##NM_133647|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	0.999843	CTCF.p2:0:1.000
chr9	92218040	92218154	reg1002745.p1	14.478	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-105090	-	BC054500 NM_001142287 NM_006378	-123487	-	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-284679	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	1884	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	1187022	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1345939	+	BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase	0.246442	CTCF.p2:-14:0.246
chr22	39925309	39925459	reg1003394.p1	14.477	+	AK296028 TSC_hg19_v1_chr22_+_39916566 AK057751 D90209 NM_001675 NM_182810 BC008090 BC022088 BC011994 BC024775 BC016855 BC073754 BC044895 BC073990	-8790	+	TSC_hg19_v1_chr22_+_39898401 BC008327 AK290954	-26986	+	TSC_hg19_v1_chr22_+_39898366 AK026539	-27019	+	TSC_hg19_v1_chr22_-_39928750 CU013041 CU013329	3316	-	BC047711 TSC_hg19_v1_chr22_-_39928752 AK025423	3367	-	TSC_hg19_v1_chr22_-_39928773 CR456443 BC037573 NM_194326	3430	-	AK296028|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##AK057751|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##D90209|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##NM_001675|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##NM_182810|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC008090|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC022088|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC011994|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC024775|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC016855|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC073754|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC044895|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC073990|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC008327|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AK290954|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AK026539|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##CU013041|RPS19BP1|91582|ribosomal protein S19 binding protein 1##CU013329|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC047711|RPS19BP1|91582|ribosomal protein S19 binding protein 1##AK025423|RPS19BP1|91582|ribosomal protein S19 binding protein 1##CR456443|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC037573|RPS19BP1|91582|ribosomal protein S19 binding protein 1##NM_194326|RPS19BP1|91582|ribosomal protein S19 binding protein 1	1.036926	CTCF.p2:21:0.998
chr1	39052833	39052964	reg1004040.p1	14.475	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-540449	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-574468	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-574513	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	272488	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	286118	-	AK312811 BC051675 AK123051 NM_030772	294379	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.095874	
chr17	30810623	30810754	reg1003813.p1	14.475	+	TSC_hg19_v1_chr17_+_30771536 BC000437 BC004430 AB590847	-39143	+	TSC_hg19_v1_chr17_+_30771527 AK223196 AB003102	-39162	+	TSC_hg19_v1_chr17_+_30771521 AK300342	-39168	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	3383	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	3909	+	TSC_hg19_v1_chr17_+_30814712 AK307275	4072	+	BC000437|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##BC004430|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##AK223196|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##AB003102|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##AK300342|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	0.284071	CTCF.p2:-10:0.284
chr1	93527874	93528004	reg1003775.p1	14.475	+	TSC_hg19_v1_chr1_-_93427020 BC070342 NM_001006605 NM_001252269 NM_001252270 NM_001252273	-100901	-	TSC_hg19_v1_chr1_-_93399531 BX648424	-128347	-	NM_001252271	-185233	-	TSC_hg19_v1_chr1_+_93544836 NM_001164391 NM_001164392 NM_001164393 NM_007358 AK290318 AK302900 AJ010014 AK302776 AF086908 BC010013 BC001897	16894	+	AY359039 BC016556 AF151858 TSC_hg19_v1_chr1_-_93645971 AK293308 BC016365 AK312787 CR936808 AK125882	118048	-	BC070051 NM_001167830 NM_016040	118306	-	BC070342|FAM69A|388650|family with sequence similarity 69, member A##NM_001006605|FAM69A|388650|family with sequence similarity 69, member A##NM_001252269|FAM69A|388650|family with sequence similarity 69, member A##NM_001252270|FAM69A|388650|family with sequence similarity 69, member A##NM_001252273|FAM69A|388650|family with sequence similarity 69, member A##NM_001252271|FAM69A|388650|family with sequence similarity 69, member A##NM_001164391|MTF2|22823|metal response element binding transcription factor 2##NM_001164392|MTF2|22823|metal response element binding transcription factor 2##NM_001164393|MTF2|22823|metal response element binding transcription factor 2##NM_007358|MTF2|22823|metal response element binding transcription factor 2##AK290318|MTF2|22823|metal response element binding transcription factor 2##AK302900|MTF2|22823|metal response element binding transcription factor 2##AJ010014|MTF2|22823|metal response element binding transcription factor 2##AK302776|MTF2|22823|metal response element binding transcription factor 2##AF086908|MTF2|22823|metal response element binding transcription factor 2##BC010013|MTF2|22823|metal response element binding transcription factor 2##BC001897|MTF2|22823|metal response element binding transcription factor 2##AY359039|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016556|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AF151858|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK293308|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016365|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK312787|TMED5|50999|transmembrane emp24 protein transport domain containing 5##CR936808|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK125882|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC070051|TMED5|50999|transmembrane emp24 protein transport domain containing 5##NM_001167830|TMED5|50999|transmembrane emp24 protein transport domain containing 5##NM_016040|TMED5|50999|transmembrane emp24 protein transport domain containing 5	0.289388	CTCF.p2:6:0.277
chr1	219559280	219559415	reg1002442.p2	14.474	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-212105	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-212189	+	M19154 TSC_hg19_v1_chr1_+_218519634	-1039742	+	BC036078 TSC_hg19_v1_chr1_-_220101540	542182	-	AB464233 TSC_hg19_v1_chr1_-_220101784	542444	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	542618	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.852483	CTCF.p2:7:0.852
chr1	14286993	14287123	reg1003484.p1	14.473	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-211117	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-211135	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-211173	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	638136	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	963661	+	AY505121 NM_001018001	969237	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.995851	CTCF.p2:13:0.996
chr2	99453656	99453774	reg1002050.p1	14.473	+	NM_012214 TSC_hg19_v1_chr2_-_99347596	-106102	-	TSC_hg19_v1_chr2_-_99347557 AK314024	-106219	-	AK304393 AK309852 NM_001160154	-173780	-	BC068277 NM_207362	98965	-	BC028366 NM_182911	304320	-	AK126402 AK314133 BC021264 NM_144706	304350	+	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK304393|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK309852|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##NM_001160154|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##BC068277|C2orf55|343990|chromosome 2 open reading frame 55##NM_207362|C2orf55|343990|chromosome 2 open reading frame 55##BC028366|TSGA10|80705|testis specific, 10##NM_182911|TSGA10|80705|testis specific, 10##AK314133|C2orf15|150590|chromosome 2 open reading frame 15##BC021264|C2orf15|150590|chromosome 2 open reading frame 15##NM_144706|C2orf15|150590|chromosome 2 open reading frame 15	0.994707	CTCF.p2:10:0.995
chr18	32935152	32935289	reg1003644.p1	14.471	+	TSC_hg19_v1_chr18_-_32924421 AK291246 NM_006965	-10799	-	TSC_hg19_v1_chr18_-_32924385 AF038964 BC003566 U68536 BC016801	-10822	-	TSC_hg19_v1_chr18_+_32870279 AK023456 AF159567 AK094216	-64916	+	BC130288 BC136314 AF492004 AF533251 AK055775 NM_145756	22073	-	AK095502 AK300660 BC039404 NM_001098817 NM_194281	142705	-	NM_020474 BC047746 U41514 AB529022 X85018	299359	+	AK291246|ZNF24|7572|zinc finger protein 24##NM_006965|ZNF24|7572|zinc finger protein 24##AF038964|ZNF24|7572|zinc finger protein 24##BC003566|ZNF24|7572|zinc finger protein 24##U68536|ZNF24|7572|zinc finger protein 24##BC016801|ZNF24|7572|zinc finger protein 24##AK023456|ZNF271|10778|zinc finger protein 271##AF159567|ZNF271|10778|zinc finger protein 271##AK094216|ZNF271|10778|zinc finger protein 271##BC130288|ZNF396|252884|zinc finger protein 396##BC136314|ZNF396|252884|zinc finger protein 396##AF492004|ZNF396|252884|zinc finger protein 396##AF533251|ZNF396|252884|zinc finger protein 396##AK055775|ZNF396|252884|zinc finger protein 396##NM_145756|ZNF396|252884|zinc finger protein 396##AK095502|INO80C|125476|INO80 complex subunit C##AK300660|INO80C|125476|INO80 complex subunit C##BC039404|INO80C|125476|INO80 complex subunit C##NM_001098817|INO80C|125476|INO80 complex subunit C##NM_194281|INO80C|125476|INO80 complex subunit C##NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)	0.970146	CTCF.p2:-7:0.970
chr8	86375510	86375626	reg1002405.p2	14.471	+	AK096880 NM_005181 TSC_hg19_v1_chr8_+_86351055 AK300670 AK300677 AK313254 BC004897 CU678792	-24472	+	BC027890 NM_001128829 NM_001128830 NM_001128831 NM_001738	-85231	-	CU693312 DQ890930 DQ894091 X05014 NM_001164830	-121666	-	NM_000067 AF015039 TSC_hg19_v1_chr8_+_86376232 AK312978 BC011949 J03037 Y00339 M36532 DQ891320 DQ894504 AB591010 CU680124 CR536526 CR541875	652	+	NM_172239	200157	-	NM_172239	413737	-	AK096880|CA3|761|carbonic anhydrase III, muscle specific##NM_005181|CA3|761|carbonic anhydrase III, muscle specific##AK300670|CA3|761|carbonic anhydrase III, muscle specific##AK300677|CA3|761|carbonic anhydrase III, muscle specific##AK313254|CA3|761|carbonic anhydrase III, muscle specific##BC004897|CA3|761|carbonic anhydrase III, muscle specific##BC027890|CA1|759|carbonic anhydrase I##NM_001128829|CA1|759|carbonic anhydrase I##NM_001128830|CA1|759|carbonic anhydrase I##NM_001128831|CA1|759|carbonic anhydrase I##NM_001738|CA1|759|carbonic anhydrase I##DQ890930|CA1|759|carbonic anhydrase I##DQ894091|CA1|759|carbonic anhydrase I##X05014|CA1|759|carbonic anhydrase I##NM_001164830|CA1|759|carbonic anhydrase I##NM_000067|CA2|760|carbonic anhydrase II##AF015039|CA2|760|carbonic anhydrase II##AK312978|CA2|760|carbonic anhydrase II##BC011949|CA2|760|carbonic anhydrase II##J03037|CA2|760|carbonic anhydrase II##Y00339|CA2|760|carbonic anhydrase II##M36532|CA2|760|carbonic anhydrase II##DQ891320|CA2|760|carbonic anhydrase II##DQ894504|CA2|760|carbonic anhydrase II##CR536526|CA2|760|carbonic anhydrase II##CR541875|CA2|760|carbonic anhydrase II##NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1##NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1	0.058241	
chr12	91502941	91503063	reg1002847.p2	14.469	+	NM_007035	-50872	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	-104223	-	U59111 TSC_hg19_v1_chr12_-_91398750	-104255	-	BC035997 AK223177 U18728 U21128 AK312682 TSC_hg19_v1_chr12_-_91505272 BC007038	2252	-	NM_002345	2539	-	AF138300 AF138301 AF138302 AF138303 AF138304 BT019800 CR407676 CR541946 NM_133504 NM_133505 NM_133506 NM_133507 AB463564 CU675109 DQ892556 DQ895769 BC005322	69343	-	NM_007035|KERA|11081|keratocan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan##U59111|EPYC|1833|epiphycan##BC035997|LUM|4060|lumican##AK223177|LUM|4060|lumican##U18728|LUM|4060|lumican##U21128|LUM|4060|lumican##AK312682|LUM|4060|lumican##BC007038|LUM|4060|lumican##NM_002345|LUM|4060|lumican##AF138300|DCN|1634|decorin##AF138301|DCN|1634|decorin##AF138302|DCN|1634|decorin##AF138303|DCN|1634|decorin##AF138304|DCN|1634|decorin##BT019800|DCN|1634|decorin##CR407676|DCN|1634|decorin##CR541946|DCN|1634|decorin##NM_133504|DCN|1634|decorin##NM_133505|DCN|1634|decorin##NM_133506|DCN|1634|decorin##NM_133507|DCN|1634|decorin##DQ892556|DCN|1634|decorin##DQ895769|DCN|1634|decorin##BC005322|DCN|1634|decorin	0.97649	CTCF.p2:7:0.976
chr10	71275530	71275633	reg1002892.p1	14.467	+	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	-64248	+	TSC_hg19_v1_chr10_+_71211220 NM_012339 BC003157 BC004161 AF120266	-64320	+	AK300649 BC033742 AK291996 NM_001057	-98961	-	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	57519	-	NM_145306 BC013587	114426	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	286076	+	NM_012339|TSPAN15|23555|tetraspanin 15##BC003157|TSPAN15|23555|tetraspanin 15##BC004161|TSPAN15|23555|tetraspanin 15##AF120266|TSPAN15|23555|tetraspanin 15##AK300649|TACR2|6865|tachykinin receptor 2##BC033742|TACR2|6865|tachykinin receptor 2##AK291996|TACR2|6865|tachykinin receptor 2##NM_001057|TACR2|6865|tachykinin receptor 2##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3##NM_145306|C10orf35|219738|chromosome 10 open reading frame 35##BC013587|C10orf35|219738|chromosome 10 open reading frame 35##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1	0.700533	CTCF.p2:-9:0.701
chr11	86002955	86003092	reg1003934.p1	14.467	+	TSC_hg19_v1_chr11_+_85956277 BC068995 AK294133 CU686693 AB463023 EU446743 AF078933 AK301265 BC047672	-46737	+	AF099032 U90651 TSC_hg19_v1_chr11_+_85956254	-46806	+	AF070418 TSC_hg19_v1_chr11_+_85956058	-46974	+	NM_016401 TSC_hg19_v1_chr11_+_86013281 AF161487 AF161527 AK001447 AK223198 BC015991 BC021621 AK298763 BC018080 BC001677 BC006476 DQ892731 DQ895977 CU674828 CU676162	10346	+	AK131331 NM_001156474 NM_021827	82754	+	TSC_hg19_v1_chr11_-_86383218 BC022472 NM_001014811 AK092181	380182	-	BC068995|EED|8726|embryonic ectoderm development##AK294133|EED|8726|embryonic ectoderm development##EU446743|EED|8726|embryonic ectoderm development##AF078933|EED|8726|embryonic ectoderm development##AK301265|EED|8726|embryonic ectoderm development##BC047672|EED|8726|embryonic ectoderm development##AF099032|EED|8726|embryonic ectoderm development##U90651|EED|8726|embryonic ectoderm development##AF070418|EED|8726|embryonic ectoderm development##NM_016401|C11orf73|51501|chromosome 11 open reading frame 73##AF161487|C11orf73|51501|chromosome 11 open reading frame 73##AF161527|C11orf73|51501|chromosome 11 open reading frame 73##AK001447|C11orf73|51501|chromosome 11 open reading frame 73##AK223198|C11orf73|51501|chromosome 11 open reading frame 73##BC015991|C11orf73|51501|chromosome 11 open reading frame 73##BC021621|C11orf73|51501|chromosome 11 open reading frame 73##AK298763|C11orf73|51501|chromosome 11 open reading frame 73##BC018080|C11orf73|51501|chromosome 11 open reading frame 73##BC001677|C11orf73|51501|chromosome 11 open reading frame 73##BC006476|C11orf73|51501|chromosome 11 open reading frame 73##DQ892731|C11orf73|51501|chromosome 11 open reading frame 73##DQ895977|C11orf73|51501|chromosome 11 open reading frame 73##AK131331|CCDC81|60494|coiled-coil domain containing 81##NM_001156474|CCDC81|60494|coiled-coil domain containing 81##NM_021827|CCDC81|60494|coiled-coil domain containing 81##BC022472|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001014811|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK092181|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial	0.983203	CTCF.p2:3:0.983
chr1	116350498	116350622	reg1003364.p1	14.465	+	AK129891 TSC_hg19_v1_chr1_-_116311410 NM_001232 AK293595	-39144	-	TSC_hg19_v1_chr1_-_116311336 AK295502 BC022288 AK313041	-39209	-	CU692536 DQ893219 DQ896548 D55655 AK225959 TSC_hg19_v1_chr1_-_116311307	-39326	-	BC096361 BC096362 TSC_hg19_v1_chr1_+_116380417 AB007959 BC028729	29897	+	AK307156 TSC_hg19_v1_chr1_-_116383325 NM_001111061 AK312849	32782	-	BC096359 BC096360 TSC_hg19_v1_chr1_-_116383744 M96740 NM_005599	33160	-	AK129891|CASQ2|845|calsequestrin 2 (cardiac muscle)##NM_001232|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK293595|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK295502|CASQ2|845|calsequestrin 2 (cardiac muscle)##BC022288|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK313041|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ893219|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ896548|CASQ2|845|calsequestrin 2 (cardiac muscle)##D55655|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK225959|CASQ2|845|calsequestrin 2 (cardiac muscle)##AB007959|NHLH2|4808|nescient helix loop helix 2##BC028729|NHLH2|4808|nescient helix loop helix 2##NM_001111061|NHLH2|4808|nescient helix loop helix 2##AK312849|NHLH2|4808|nescient helix loop helix 2##BC096359|NHLH2|4808|nescient helix loop helix 2##BC096360|NHLH2|4808|nescient helix loop helix 2##M96740|NHLH2|4808|nescient helix loop helix 2##NM_005599|NHLH2|4808|nescient helix loop helix 2	0.970927	CTCF.p2:-7:0.971
chr3	88252839	88252944	reg1002611.p1	14.463	+	AL832398 NM_173824 TSC_hg19_v1_chr3_+_88199126 BC024188 AK297719 AK313547	-53863	+	NM_001195308 BC005222	-53867	-	AF543494 NM_018293	-64630	+	AF213459 NM_005233 NM_182644 BC063282 TSC_hg19_v1_chr3_+_89156770	903830	+	M83941 AF213460 BC026247 TSC_hg19_v1_chr3_+_89156840 AK291411 AB384708	903959	+	AB590252 DQ892389 DQ895602 TSC_hg19_v1_chr3_-_93692741 Y00692 AK292994	5439785	-	AL832398|C3orf38|285237|chromosome 3 open reading frame 38##NM_173824|C3orf38|285237|chromosome 3 open reading frame 38##BC024188|C3orf38|285237|chromosome 3 open reading frame 38##AK297719|C3orf38|285237|chromosome 3 open reading frame 38##AK313547|C3orf38|285237|chromosome 3 open reading frame 38##NM_001195308|CGGBP1|8545|CGG triplet repeat binding protein 1##BC005222|CGGBP1|8545|CGG triplet repeat binding protein 1##AF543494|ZNF654|55279|zinc finger protein 654##NM_018293|ZNF654|55279|zinc finger protein 654##AF213459|EPHA3|2042|EPH receptor A3##NM_005233|EPHA3|2042|EPH receptor A3##NM_182644|EPHA3|2042|EPH receptor A3##BC063282|EPHA3|2042|EPH receptor A3##M83941|EPHA3|2042|EPH receptor A3##AF213460|EPHA3|2042|EPH receptor A3##BC026247|EPHA3|2042|EPH receptor A3##AK291411|EPHA3|2042|EPH receptor A3##DQ892389|PROS1|5627|protein S (alpha)##DQ895602|PROS1|5627|protein S (alpha)##Y00692|PROS1|5627|protein S (alpha)##AK292994|PROS1|5627|protein S (alpha)	0.0	
chr1	94095173	94095284	reg1002348.p1	14.462	+	TSC_hg19_v1_chr1_+_94057602 BC084562	-37621	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-37688	+	TSC_hg19_v1_chr1_+_93913680 NM_001024948 NM_001164473 NM_017737 AY514449	-181506	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	52099	-	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	249486	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	249520	-	BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##NM_001024948|FNBP1L|54874|formin binding protein 1-like##NM_001164473|FNBP1L|54874|formin binding protein 1-like##NM_017737|FNBP1L|54874|formin binding protein 1-like##AY514449|FNBP1L|54874|formin binding protein 1-like##U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2	0.813388	CTCF.p2:-12:0.813
chr20	42818990	42819088	reg1002550.p2	14.462	+	BC029957 NM_020433 NM_175913	-2822	-	AL132999 TSC_hg19_v1_chr20_-_42815818 AK304863	-3246	-	NM_001098798	-244504	+	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	20317	-	TSC_hg19_v1_chr20_-_42839428 AF151041 AF161517 AL133000 AK000476 NM_016470	20445	-	BC048277 BC067866 BC094781 BC032458 BC036500 AK055067 BC019858 TSC_hg19_v1_chr20_+_42839737	20632	+	BC029957|JPH2|57158|junctophilin 2##NM_020433|JPH2|57158|junctophilin 2##NM_175913|JPH2|57158|junctophilin 2##AL132999|JPH2|57158|junctophilin 2##AK304863|JPH2|57158|junctophilin 2##NM_001098798|TOX2|84969|TOX high mobility group box family member 2##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111##AF151041|C20orf111|51526|chromosome 20 open reading frame 111##AF161517|C20orf111|51526|chromosome 20 open reading frame 111##AL133000|C20orf111|51526|chromosome 20 open reading frame 111##AK000476|C20orf111|51526|chromosome 20 open reading frame 111##NM_016470|C20orf111|51526|chromosome 20 open reading frame 111##BC048277|LOC100505783|100505783|uncharacterized LOC100505783##BC067866|LOC100505783|100505783|uncharacterized LOC100505783##BC094781|LOC100505783|100505783|uncharacterized LOC100505783##BC032458|LOC100505783|100505783|uncharacterized LOC100505783##BC036500|LOC100505783|100505783|uncharacterized LOC100505783##AK055067|LOC100505783|100505783|uncharacterized LOC100505783##BC019858|LOC100505783|100505783|uncharacterized LOC100505783	0.061141	
chr5	10988131	10988259	reg1002521.p1	14.462	+	TSC_hg19_v1_chr5_-_10761361 NM_004394	-226796	-	TSC_hg19_v1_chr5_-_10761341 BC002726	-226853	-	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	-226936	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	915841	-	TSC_hg19_v1_chr5_-_11904184 AK296232	915989	-	AX800026 AY045575 NM_001369	2956393	-	NM_004394|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5	0.655329	CTCF.p2:4:0.655
chr15	31507741	31507875	reg1003605.p1	14.461	+	GQ502181 HM135791 NM_001252020	-54380	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-113891	-	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	-224041	-	NM_001243538	15241	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	111530	+	AJ430383 NM_130901	439733	-	GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10##NM_001243538|LOC283710|283710|uncharacterized LOC283710##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A	1.008059	CTCF.p2:-11:0.981
chr17	1687409	1687545	reg1004270.p1	14.459	+	AF400442 TSC_hg19_v1_chr17_+_1665353 AB593011 AB593012 AB593013 BC013984 BC000522 AY513280	-22114	+	TSC_hg19_v1_chr17_+_1665311 AK315344	-22154	+	TSC_hg19_v1_chr17_+_1665282 M76979	-22187	+	TSC_hg19_v1_chr17_-_1733157 BC035077 AK095369 NM_052928	45661	-	TSC_hg19_v1_chr17_+_1733284 NM_002945 AK289704	45807	+	TSC_hg19_v1_chr17_+_1733335 M63488 AB209732 BC018126 AB385027 HQ258560	45872	+	AF400442|SERPINF1|5176|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1##AB593011|SERPINF1|5176|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1##AB593012|SERPINF1|5176|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1##AB593013|SERPINF1|5176|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1##BC013984|SERPINF1|5176|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1##BC000522|SERPINF1|5176|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1##AY513280|SERPINF1|5176|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1##AK315344|SERPINF1|5176|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1##M76979|SERPINF1|5176|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1##BC035077|SMYD4|114826|SET and MYND domain containing 4##AK095369|SMYD4|114826|SET and MYND domain containing 4##NM_052928|SMYD4|114826|SET and MYND domain containing 4##NM_002945|RPA1|6117|replication protein A1, 70kDa##AK289704|RPA1|6117|replication protein A1, 70kDa##M63488|RPA1|6117|replication protein A1, 70kDa##AB209732|RPA1|6117|replication protein A1, 70kDa##BC018126|RPA1|6117|replication protein A1, 70kDa##HQ258560|RPA1|6117|replication protein A1, 70kDa	0.67199	CTCF.p2:15:0.672
chr3	99973134	99973249	reg1002130.p1	14.459	+	TSC_hg19_v1_chr3_+_99898312 AK055026	-74830	+	AK300704 NM_001167924	-139418	+	BC017987 NM_001042459 NM_182909 AF329092 AX776292	-139839	-	NM_001199198 NM_018309 TSC_hg19_v1_chr3_+_99979835 AK001908 AB449910 BC020955 BX648032	6586	+	TSC_hg19_v1_chr3_+_100053600 NM_020202 AF260334 BC107890 AK225979 AK294010 AK295835 BC020620 AF284574 AK313704	80416	+	TSC_hg19_v1_chr3_-_100119707 DQ896424 CU688068	146560	-	AK300704|C3orf26|84319|chromosome 3 open reading frame 26##NM_001167924|C3orf26|84319|chromosome 3 open reading frame 26##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like##NM_001199198|TBC1D23|55773|TBC1 domain family, member 23##NM_018309|TBC1D23|55773|TBC1 domain family, member 23##AK001908|TBC1D23|55773|TBC1 domain family, member 23##AB449910|TBC1D23|55773|TBC1 domain family, member 23##BC020955|TBC1D23|55773|TBC1 domain family, member 23##BX648032|TBC1D23|55773|TBC1 domain family, member 23##NM_020202|NIT2|56954|nitrilase family, member 2##AF260334|NIT2|56954|nitrilase family, member 2##BC107890|NIT2|56954|nitrilase family, member 2##AK225979|NIT2|56954|nitrilase family, member 2##AK294010|NIT2|56954|nitrilase family, member 2##BC020620|NIT2|56954|nitrilase family, member 2##AF284574|NIT2|56954|nitrilase family, member 2##AK313704|NIT2|56954|nitrilase family, member 2##DQ896424|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)	0.966281	CTCF.p2:23:0.966
chr5	54141078	54141219	reg1004215.p1	14.459	+	TSC_hg19_v1_chr5_+_53813761 AF395536	-327377	+	TSC_hg19_v1_chr5_+_53813656 BC117218 BC117220	-327475	+	TSC_hg19_v1_chr5_+_53813588 AK304195 NM_001145427 BC060791 BC067860 NM_001102575 NM_052870	-327603	+	AB590689 CU680150 AJ973643 X89426 BC011989 NM_001135604 NM_007036 TSC_hg19_v1_chr5_-_54281422 AK300634 AK311817	140235	-	AK312074 BC035802 NM_002104 U26174 DQ894093 EU176203 U35237	178968	+	NM_006144 BC015739 DQ893071 DQ896326 AB528402 CR456968 M18737	257343	+	AF395536|SNX18|112574|sorting nexin 18##BC117218|SNX18|112574|sorting nexin 18##BC117220|SNX18|112574|sorting nexin 18##AK304195|SNX18|112574|sorting nexin 18##NM_001145427|SNX18|112574|sorting nexin 18##BC060791|SNX18|112574|sorting nexin 18##BC067860|SNX18|112574|sorting nexin 18##NM_001102575|SNX18|112574|sorting nexin 18##NM_052870|SNX18|112574|sorting nexin 18##AJ973643|ESM1|11082|endothelial cell-specific molecule 1##X89426|ESM1|11082|endothelial cell-specific molecule 1##BC011989|ESM1|11082|endothelial cell-specific molecule 1##NM_001135604|ESM1|11082|endothelial cell-specific molecule 1##NM_007036|ESM1|11082|endothelial cell-specific molecule 1##AK300634|ESM1|11082|endothelial cell-specific molecule 1##AK311817|ESM1|11082|endothelial cell-specific molecule 1##AK312074|GZMK|3003|granzyme K (granzyme 3; tryptase II)##BC035802|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_002104|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U26174|GZMK|3003|granzyme K (granzyme 3; tryptase II)##DQ894093|GZMK|3003|granzyme K (granzyme 3; tryptase II)##EU176203|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U35237|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	0.679022	CTCF.p2:12:0.679
chr8	119132939	119133059	reg1002359.p2	14.459	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	-9038	-	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	-599957	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	-600041	+	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	501126	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	501208	-	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	831221	-	AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##NM_080651|MED30|90390|mediator complex subunit 30##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	0.975605	CTCF.p2:2:0.976
chr16	18015578	18015722	reg1003966.p1	14.457	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	-450845	-	TSC_hg19_v1_chr16_+_16326508 AB463143	-1689120	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1689162	+	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	557741	-	TSC_hg19_v1_chr16_-_18798077 AK127316	782446	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	786005	-	AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a	1.019972	CTCF.p2:-12:1.000
chr3	113213983	113214129	reg1004170.p2	14.457	+	BC101582 BC113553 AK056472 NM_001164496 NM_018338	-53717	-	AY358328 NM_033254 AK309055	-282657	+	BC067743 TSC_hg19_v1_chr3_-_112738514 AK295954 AK293218 BC014673 NM_015412 CR749341	-475510	-	TSC_hg19_v1_chr3_-_113233690 AK296160	19630	-	AY099107 BC036951 TSC_hg19_v1_chr3_-_113234023 AK057966 AL832327 AL832148 NM_144718	19937	-	NM_017699	37161	+	BC101582|WDR52|55779|WD repeat domain 52##BC113553|WDR52|55779|WD repeat domain 52##AK056472|WDR52|55779|WD repeat domain 52##NM_001164496|WDR52|55779|WD repeat domain 52##NM_018338|WDR52|55779|WD repeat domain 52##AY358328|BOC|91653|Boc homolog (mouse)##NM_033254|BOC|91653|Boc homolog (mouse)##AK309055|BOC|91653|Boc homolog (mouse)##BC067743|C3orf17|25871|chromosome 3 open reading frame 17##AK295954|C3orf17|25871|chromosome 3 open reading frame 17##AK293218|C3orf17|25871|chromosome 3 open reading frame 17##BC014673|C3orf17|25871|chromosome 3 open reading frame 17##NM_015412|C3orf17|25871|chromosome 3 open reading frame 17##CR749341|C3orf17|25871|chromosome 3 open reading frame 17##AK296160|SPICE1|152185|spindle and centriole associated protein 1##AY099107|SPICE1|152185|spindle and centriole associated protein 1##BC036951|SPICE1|152185|spindle and centriole associated protein 1##AK057966|SPICE1|152185|spindle and centriole associated protein 1##AL832327|SPICE1|152185|spindle and centriole associated protein 1##AL832148|SPICE1|152185|spindle and centriole associated protein 1##NM_144718|SPICE1|152185|spindle and centriole associated protein 1##NM_017699|SIDT1|54847|SID1 transmembrane family, member 1	0.987774	CTCF.p2:4:0.988
chr9	18255189	18255325	reg1004238.p1	14.457	+	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	-676161	+	TSC_hg19_v1_chr9_+_17134988 AK303973 AK308837 BX647069 AK098502 NM_001114395 NM_017738	-1120240	+	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	-1384491	-	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	218831	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	218926	+	BC033489 AK292245 AK057474 NM_153707	777962	-	AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##AK303973|CNTLN|54875|centlein, centrosomal protein##AK308837|CNTLN|54875|centlein, centrosomal protein##BX647069|CNTLN|54875|centlein, centrosomal protein##AK098502|CNTLN|54875|centlein, centrosomal protein##NM_001114395|CNTLN|54875|centlein, centrosomal protein##NM_017738|CNTLN|54875|centlein, centrosomal protein##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1##BC033489|FAM154A|158297|family with sequence similarity 154, member A##AK292245|FAM154A|158297|family with sequence similarity 154, member A##AK057474|FAM154A|158297|family with sequence similarity 154, member A##NM_153707|FAM154A|158297|family with sequence similarity 154, member A	0.996318	CTCF.p2:-4:0.996
chr17	78997728	78997828	reg1002576.p1	14.455	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	-32084	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	-32137	+	TSC_hg19_v1_chr17_+_78935064 BC073898	-62646	+	AK124762 TSC_hg19_v1_chr17_-_79008489 AK056555	10669	-	TSC_hg19_v1_chr17_+_79008950 NM_001144888 NM_006340 NM_017450 NM_017451 AK298629 AK023688 AK222670 AK225612 AK297644	11171	+	BC032559 BC014020 AB015019 AB015020 AB017119 AB017120 U70669 TSC_hg19_v1_chr17_+_79008989 BC002495 DQ893456 DQ896329 AB528742 CU680744 CU689422	11227	+	AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6##NM_024591|CHMP6|79643|charged multivesicular body protein 6##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK124762|FLJ90757|440465|uncharacterized LOC440465##AK056555|FLJ90757|440465|uncharacterized LOC440465##NM_001144888|BAIAP2|10458|BAI1-associated protein 2##NM_006340|BAIAP2|10458|BAI1-associated protein 2##NM_017450|BAIAP2|10458|BAI1-associated protein 2##NM_017451|BAIAP2|10458|BAI1-associated protein 2##AK298629|BAIAP2|10458|BAI1-associated protein 2##AK023688|BAIAP2|10458|BAI1-associated protein 2##AK222670|BAIAP2|10458|BAI1-associated protein 2##AK225612|BAIAP2|10458|BAI1-associated protein 2##AK297644|BAIAP2|10458|BAI1-associated protein 2##BC032559|BAIAP2|10458|BAI1-associated protein 2##BC014020|BAIAP2|10458|BAI1-associated protein 2##AB015019|BAIAP2|10458|BAI1-associated protein 2##AB015020|BAIAP2|10458|BAI1-associated protein 2##AB017119|BAIAP2|10458|BAI1-associated protein 2##AB017120|BAIAP2|10458|BAI1-associated protein 2##U70669|BAIAP2|10458|BAI1-associated protein 2##BC002495|BAIAP2|10458|BAI1-associated protein 2##DQ893456|BAIAP2|10458|BAI1-associated protein 2##DQ896329|BAIAP2|10458|BAI1-associated protein 2	0.999734	CTCF.p2:3:1.000
chr19	17163409	17163527	reg1003997.p1	14.455	+	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-25928	-	AK075099 TSC_hg19_v1_chr19_-_17014494	-149015	-	AK092632 TSC_hg19_v1_chr19_-_17007756 AK124052	-155720	-	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	22853	-	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	23125	+	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	162704	+	AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK075099|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK092632|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK124052|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)	0.914254	CTCF.p2:0:0.914
chr21	34817663	34817782	reg1002562.p1	14.454	+	TSC_hg19_v1_chr21_-_34787167 DQ655977	-30514	-	TSC_hg19_v1_chr21_+_34775780 AB463788 DQ892320 DQ895522	-41909	+	AK314005 TSC_hg19_v1_chr21_+_34775746 AK292246	-41974	+	TSC_hg19_v1_chr21_-_34852209 AK310701	34465	-	TSC_hg19_v1_chr21_-_34852239 AY358634 BC000569 AK309977 BX537378 AF045606	34527	-	TSC_hg19_v1_chr21_-_34852282 NM_006134 DQ656043	34577	-	DQ892320|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##DQ895522|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK314005|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK292246|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK310701|TMEM50B|757|transmembrane protein 50B##AY358634|TMEM50B|757|transmembrane protein 50B##BC000569|TMEM50B|757|transmembrane protein 50B##AK309977|TMEM50B|757|transmembrane protein 50B##AF045606|TMEM50B|757|transmembrane protein 50B##NM_006134|TMEM50B|757|transmembrane protein 50B##DQ656043|TMEM50B|757|transmembrane protein 50B	0.935887	CTCF.p2:35:0.936
chr3	112238361	112238500	reg1002951.p2	14.454	+	AK292692 NM_001085357 NM_181780	-20035	-	AL832529 AK129797 AK293399 BC031103 TSC_hg19_v1_chr3_+_112052024 AK074972	-186406	+	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	-186472	+	AK307432 AB079384 CU692886 DQ893424 DQ896774 AF202092 TSC_hg19_v1_chr3_-_112280499 BC024221 NM_022488 AL137515	42012	-	TSC_hg19_v1_chr3_-_112280761 BC002830	42331	-	TSC_hg19_v1_chr3_-_112280783 AK308919	42352	-	AK292692|BTLA|151888|B and T lymphocyte associated##NM_001085357|BTLA|151888|B and T lymphocyte associated##NM_181780|BTLA|151888|B and T lymphocyte associated##AL832529|CD200|4345|CD200 molecule##AK129797|CD200|4345|CD200 molecule##AK293399|CD200|4345|CD200 molecule##BC031103|CD200|4345|CD200 molecule##AK074972|CD200|4345|CD200 molecule##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule##AK307432|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AB079384|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##DQ893424|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##DQ896774|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AF202092|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##BC024221|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##NM_022488|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AL137515|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##BC002830|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AK308919|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)	0.991485	CTCF.p2:7:0.991
chr6	124123827	124123953	reg1002907.p2	14.454	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	-165801	-	BC101377 BC101376 NM_001010852	-806310	+	TSC_hg19_v1_chr6_+_123317379 AK295158	-806507	+	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	1314	+	AK093417 AX748113 BC026087 NM_152553	1180621	+	TSC_hg19_v1_chr6_+_125474909 NM_001003396 NM_001003397 NM_003287 AK291866 U44427 BC002375 AK291872 AF208012 AK291887	1351049	+	U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##AK295158|CLVS2|134829|clavesin 2##NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217##NM_001003396|TPD52L1|7164|tumor protein D52-like 1##NM_001003397|TPD52L1|7164|tumor protein D52-like 1##NM_003287|TPD52L1|7164|tumor protein D52-like 1##AK291866|TPD52L1|7164|tumor protein D52-like 1##U44427|TPD52L1|7164|tumor protein D52-like 1##BC002375|TPD52L1|7164|tumor protein D52-like 1##AK291872|TPD52L1|7164|tumor protein D52-like 1##AF208012|TPD52L1|7164|tumor protein D52-like 1##AK291887|TPD52L1|7164|tumor protein D52-like 1	0.933746	CTCF.p2:-3:0.934
chr3	185977451	185977572	reg1003310.p1	14.453	+	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	-150655	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	-151165	-	TSC_hg19_v1_chr3_-_185655843 AK315632 NM_001243879 NM_004593	-321633	-	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	102423	-	CU686840 AF161703 BC069478 AK314172 NM_017541	284629	-	TSC_hg19_v1_chr3_-_186285118 AK001422 BC025748	307597	-	BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AF161703|CRYGS|1427|crystallin, gamma S##BC069478|CRYGS|1427|crystallin, gamma S##AK314172|CRYGS|1427|crystallin, gamma S##NM_017541|CRYGS|1427|crystallin, gamma S##AK001422|TBCCD1|55171|TBCC domain containing 1##BC025748|TBCCD1|55171|TBCC domain containing 1	0.969733	CTCF.p2:-11:0.970
chr15	46604462	46604598	reg1003918.p1	14.452	+	TSC_hg19_v1_chr15_+_45927245 AK222463 AF042284 NM_021199 AF151802 AK313111 BC016836	-677281	+	TSC_hg19_v1_chr15_+_45879759 AK128626	-724757	+	TSC_hg19_v1_chr15_+_45879576 AK057545 BC004819 AK315581 AB527698	-724923	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	871857	+	TSC_hg19_v1_chr15_+_48009541 AK290032	1405058	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	1406155	+	AK222463|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF042284|SQRDL|58472|sulfide quinone reductase-like (yeast)##NM_021199|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF151802|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK313111|SQRDL|58472|sulfide quinone reductase-like (yeast)##BC016836|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK128626|PLDN|26258|pallidin homolog (mouse)##AK057545|PLDN|26258|pallidin homolog (mouse)##BC004819|PLDN|26258|pallidin homolog (mouse)##AK315581|PLDN|26258|pallidin homolog (mouse)##AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	0.987297	CTCF.p2:-5:0.987
chr11	113176573	113176693	reg1003399.p1	14.451	+	TSC_hg19_v1_chr11_+_112832281 U63041 AK292453	-344327	+	X16841 TSC_hg19_v1_chr11_+_112832212	-344427	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	-344502	+	NM_017868 AK023921 TSC_hg19_v1_chr11_+_113185315 AK292331 AK091887 BC011546 BC019086 BC032355	8657	+	AJ541797 NM_178510 AF487542	81926	+	S69899 BC021195 NM_000795 NM_016574 M30625	169342	-	U63041|NCAM1|4684|neural cell adhesion molecule 1##AK292453|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##NM_017868|TTC12|54970|tetratricopeptide repeat domain 12##AK023921|TTC12|54970|tetratricopeptide repeat domain 12##AK292331|TTC12|54970|tetratricopeptide repeat domain 12##AK091887|TTC12|54970|tetratricopeptide repeat domain 12##BC011546|TTC12|54970|tetratricopeptide repeat domain 12##BC019086|TTC12|54970|tetratricopeptide repeat domain 12##BC032355|TTC12|54970|tetratricopeptide repeat domain 12##AJ541797|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_178510|ANKK1|255239|ankyrin repeat and kinase domain containing 1##AF487542|ANKK1|255239|ankyrin repeat and kinase domain containing 1##S69899|DRD2|1813|dopamine receptor D2##BC021195|DRD2|1813|dopamine receptor D2##NM_000795|DRD2|1813|dopamine receptor D2##NM_016574|DRD2|1813|dopamine receptor D2##M30625|DRD2|1813|dopamine receptor D2	0.559819	CTCF.p2:-17:0.560
chr11	76510398	76510530	reg1004229.p1	14.451	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	-16187	+	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	-128655	-	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	-129496	-	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	61468	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	61529	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	234995	+	NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3##NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)	0.508629	CTCF.p2:1:0.509
chrX	150250946	150251062	reg1002777.p2	14.451	+	TSC_hg19_v1_chrX_+_150151807 BX537505 NM_005342 Y10043 BC070482	-99197	+	TSC_hg19_v1_chrX_-_150067149 BC030536 AY358837 AL136580 NM_001184808 NM_001242614 NM_031462 NM_134445 NM_134446	-183797	-	AM393605 AM393786 DQ891322 DQ894506 AK290200 TSC_hg19_v1_chrX_-_150067096 AK293244 AY078165 AY078166 AY078167 AK125020 AK291375 BC025729 AK295217	-183911	-	NM_004224 U52219 BC103696 BC105683 BC105684 EU432118 AY114101 AY114102	94195	+	TSC_hg19_v1_chrX_+_150565667 NM_001017980	314658	+	TSC_hg19_v1_chrX_+_150565686 AK096835	314676	+	BX537505|HMGB3|3149|high mobility group box 3##NM_005342|HMGB3|3149|high mobility group box 3##Y10043|HMGB3|3149|high mobility group box 3##BC070482|HMGB3|3149|high mobility group box 3##BC030536|CD99L2|83692|CD99 molecule-like 2##AY358837|CD99L2|83692|CD99 molecule-like 2##AL136580|CD99L2|83692|CD99 molecule-like 2##NM_001184808|CD99L2|83692|CD99 molecule-like 2##NM_001242614|CD99L2|83692|CD99 molecule-like 2##NM_031462|CD99L2|83692|CD99 molecule-like 2##NM_134445|CD99L2|83692|CD99 molecule-like 2##NM_134446|CD99L2|83692|CD99 molecule-like 2##AM393605|CD99L2|83692|CD99 molecule-like 2##AM393786|CD99L2|83692|CD99 molecule-like 2##DQ891322|CD99L2|83692|CD99 molecule-like 2##DQ894506|CD99L2|83692|CD99 molecule-like 2##AK290200|CD99L2|83692|CD99 molecule-like 2##AK293244|CD99L2|83692|CD99 molecule-like 2##AY078165|CD99L2|83692|CD99 molecule-like 2##AY078166|CD99L2|83692|CD99 molecule-like 2##AY078167|CD99L2|83692|CD99 molecule-like 2##AK125020|CD99L2|83692|CD99 molecule-like 2##AK291375|CD99L2|83692|CD99 molecule-like 2##BC025729|CD99L2|83692|CD99 molecule-like 2##AK295217|CD99L2|83692|CD99 molecule-like 2##NM_004224|GPR50|9248|G protein-coupled receptor 50##U52219|GPR50|9248|G protein-coupled receptor 50##BC103696|GPR50|9248|G protein-coupled receptor 50##BC105683|GPR50|9248|G protein-coupled receptor 50##BC105684|GPR50|9248|G protein-coupled receptor 50##EU432118|GPR50|9248|G protein-coupled receptor 50##AY114101|GPR50|9248|G protein-coupled receptor 50##AY114102|GPR50|9248|G protein-coupled receptor 50##NM_001017980|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AK096835|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	0.772676	CTCF.p2:5:0.717
chr4	53531889	53532022	reg1003737.p1	14.450	+	DQ896764 EU176797 GU455414 AK022614 TSC_hg19_v1_chr4_-_53525461 AK299883 BC037574 AK024318 AK296493 NM_022832	-6546	-	AK302438 NM_001134223	-9198	-	TSC_hg19_v1_chr4_+_52917480 AK304386 AK057468 BC025396 NM_145263 AK314799	-614422	+	TSC_hg19_v1_chr4_+_53578670 BC045566 BC015222 D28589	46709	+	AY189288 TSC_hg19_v1_chr4_-_53617616	85635	-	AK095318 NM_001242690 NM_024534	85838	-	DQ896764|USP46|64854|ubiquitin specific peptidase 46##EU176797|USP46|64854|ubiquitin specific peptidase 46##GU455414|USP46|64854|ubiquitin specific peptidase 46##AK022614|USP46|64854|ubiquitin specific peptidase 46##AK299883|USP46|64854|ubiquitin specific peptidase 46##BC037574|USP46|64854|ubiquitin specific peptidase 46##AK024318|USP46|64854|ubiquitin specific peptidase 46##AK296493|USP46|64854|ubiquitin specific peptidase 46##NM_022832|USP46|64854|ubiquitin specific peptidase 46##AK302438|USP46|64854|ubiquitin specific peptidase 46##NM_001134223|USP46|64854|ubiquitin specific peptidase 46##AK304386|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK057468|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BC025396|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##NM_145263|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK314799|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BC045566|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)##BC015222|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)##D28589|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)##AY189288|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##NM_001242690|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##NM_024534|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1	0.0	
chr2	119613352	119613454	reg1002262.p1	14.449	+	NM_001426	-7645	-	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-767340	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-841670	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	86417	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	303001	-	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	367982	+	NM_001426|EN1|2019|engrailed homeobox 1##AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase	0.012641	
chr2	71737467	71737588	reg1004155.p1	14.449	+	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-43634	+	NM_001130976 NM_001130977 NM_001130978 NM_001130979 NM_001130980 NM_001130981 NM_003494 AF075575 BC171803 EU515155 EU515156 EU515157 EU515158 EU515159 EU515160	-56726	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	-178630	+	AK295683 TSC_hg19_v1_chr2_-_72371202	633672	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	637415	-	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	1315577	-	DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130976|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130977|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130978|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130979|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130980|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130981|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_003494|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AF075575|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##BC171803|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515155|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515156|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515157|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515158|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515159|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515160|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B	0.989584	CTCF.p2:2:0.990
chr15	51942259	51942381	reg1003447.p1	14.448	+	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	-27347	-	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	-308526	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	-311556	-	AF453583 NM_001165257 NM_013243 AF078851 TSC_hg19_v1_chr15_+_51973699 AY359093 AK075314 AK296466 AK290175	31311	+	AK129759 DQ892424 DQ895638 TSC_hg19_v1_chr15_-_52029856	87556	-	TSC_hg19_v1_chr15_-_52030323 AY125955 BC033515 NM_153374	87939	-	BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2##NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AF453583|SCG3|29106|secretogranin III##NM_001165257|SCG3|29106|secretogranin III##NM_013243|SCG3|29106|secretogranin III##AF078851|SCG3|29106|secretogranin III##AY359093|SCG3|29106|secretogranin III##AK075314|SCG3|29106|secretogranin III##AK296466|SCG3|29106|secretogranin III##AK290175|SCG3|29106|secretogranin III##AK129759|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ892424|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ895638|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##AY125955|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##BC033515|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##NM_153374|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	0.960551	CTCF.p2:-10:0.961
chr4	16027919	16028051	reg1002594.p1	14.447	+	AF361936 CU693032 DQ892062 DQ895256 AB529223 BC025720 AB021123 AY358978 NM_031950	-63181	-	NM_005130	-87623	-	BC003628 M60047 BC008910 BC018852 AK291307 TSC_hg19_v1_chr4_-_15939972	-88025	-	NM_001145849 NM_001145850 NM_001145851 NM_001145852 NM_006017	49755	-	TSC_hg19_v1_chr4_-_16085325 AF117225	57346	-	NM_001145847 AK075411 BC012089 NM_001145848 TSC_hg19_v1_chr4_-_16085647 AK027420 AK226033	57639	-	AF361936|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ892062|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ895256|FGFBP2|83888|fibroblast growth factor binding protein 2##BC025720|FGFBP2|83888|fibroblast growth factor binding protein 2##AB021123|FGFBP2|83888|fibroblast growth factor binding protein 2##AY358978|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_031950|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_005130|FGFBP1|9982|fibroblast growth factor binding protein 1##BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1##M60047|FGFBP1|9982|fibroblast growth factor binding protein 1##BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1##BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1##AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1##NM_001145849|PROM1|8842|prominin 1##NM_001145850|PROM1|8842|prominin 1##NM_001145851|PROM1|8842|prominin 1##NM_001145852|PROM1|8842|prominin 1##NM_006017|PROM1|8842|prominin 1##AF117225|PROM1|8842|prominin 1##NM_001145847|PROM1|8842|prominin 1##AK075411|PROM1|8842|prominin 1##BC012089|PROM1|8842|prominin 1##NM_001145848|PROM1|8842|prominin 1##AK027420|PROM1|8842|prominin 1##AK226033|PROM1|8842|prominin 1	0.999927	CTCF.p2:-3:1.000
chr1	226312966	226313104	reg1004041.p1	14.446	+	TSC_hg19_v1_chr1_+_226271319 BC032899	-41675	+	TSC_hg19_v1_chr1_+_226250433 BC081560 BC081561	-62602	+	TSC_hg19_v1_chr1_+_226250421 AK291102 AK293541 BC029405 BC067757 BC095447 M11354 BC066901	-62609	+	BC039575 TSC_hg19_v1_chr1_-_226374400	61365	-	AY150218 TSC_hg19_v1_chr1_-_226374401 BC045533 BC060792 NM_022735 AK025520 AK314468 AB043587	61382	-	BC111974 BC113441 BC143784 TSC_hg19_v1_chr1_+_226411364 AF211891 NM_031944	98315	+	BC081560|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC081561|H3F3A|3020|H3 histone, family 3A##AK291102|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##AK293541|H3F3A|3020|H3 histone, family 3A##BC029405|H3F3A|3020|H3 histone, family 3A##BC067757|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC095447|H3F3A|3020|H3 histone, family 3A##M11354|H3F3A|3020|H3 histone, family 3A##BC066901|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC039575|ACBD3|64746|acyl-CoA binding domain containing 3##AY150218|ACBD3|64746|acyl-CoA binding domain containing 3##BC045533|ACBD3|64746|acyl-CoA binding domain containing 3##BC060792|ACBD3|64746|acyl-CoA binding domain containing 3##NM_022735|ACBD3|64746|acyl-CoA binding domain containing 3##AK025520|ACBD3|64746|acyl-CoA binding domain containing 3##AK314468|ACBD3|64746|acyl-CoA binding domain containing 3##AB043587|ACBD3|64746|acyl-CoA binding domain containing 3##BC111974|MIXL1|83881|Mix paired-like homeobox##BC113441|MIXL1|83881|Mix paired-like homeobox##BC143784|MIXL1|83881|Mix paired-like homeobox##AF211891|MIXL1|83881|Mix paired-like homeobox##NM_031944|MIXL1|83881|Mix paired-like homeobox	0.999394	CTCF.p2:12:0.999
chr19	18439246	18439371	reg1002702.p1	14.443	+	TSC_hg19_v1_chr19_-_18433953 AF117235 NM_001252129 NM_012321	-5342	-	TSC_hg19_v1_chr19_-_18433887 AJ238096 AF251218 BC023665 AF182290 BC003652 BC022198 BC000387	-5421	-	TSC_hg19_v1_chr19_-_18392451 X56681	-46840	-	TSC_hg19_v1_chr19_+_18451449 AK289968 NM_017712 AK294497 BC042138 BC028063 AJ278828 AK000215	12099	+	TSC_hg19_v1_chr19_+_18496967 AB000584 AK225425 AK225431 AK291530 NM_004864 BC008962 U88323 BC000529 AF019770 U51731 BT019465	57674	+	BC025744 TSC_hg19_v1_chr19_-_18508433 NM_145256 BC053659 BC033825	69112	-	AF117235|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001252129|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012321|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238096|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF251218|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC023665|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182290|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC003652|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC022198|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC000387|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##X56681|JUND|3727|jun D proto-oncogene##AK289968|PGPEP1|54858|pyroglutamyl-peptidase I##NM_017712|PGPEP1|54858|pyroglutamyl-peptidase I##AK294497|PGPEP1|54858|pyroglutamyl-peptidase I##BC042138|PGPEP1|54858|pyroglutamyl-peptidase I##BC028063|PGPEP1|54858|pyroglutamyl-peptidase I##AJ278828|PGPEP1|54858|pyroglutamyl-peptidase I##AK000215|PGPEP1|54858|pyroglutamyl-peptidase I##AB000584|GDF15|9518|growth differentiation factor 15##AK225431|GDF15|9518|growth differentiation factor 15##AK291530|GDF15|9518|growth differentiation factor 15##NM_004864|GDF15|9518|growth differentiation factor 15##BC008962|GDF15|9518|growth differentiation factor 15##U88323|GDF15|9518|growth differentiation factor 15##BC000529|GDF15|9518|growth differentiation factor 15##AF019770|GDF15|9518|growth differentiation factor 15##U51731|GDF15|9518|growth differentiation factor 15##BT019465|GDF15|9518|growth differentiation factor 15##BC025744|LRRC25|126364|leucine rich repeat containing 25##NM_145256|LRRC25|126364|leucine rich repeat containing 25##BC053659|LRRC25|126364|leucine rich repeat containing 25##BC033825|LRRC25|126364|leucine rich repeat containing 25	0.756934	CTCF.p2:2:0.757
chr1	145421774	145421883	reg1003049.p1	14.442	+	NM_145277 NM_202004 NM_213652 NM_213653 AK223575 AK092682 AK315852 AX747669 BC017926 AK096905 AK290831 AK292742 AK092692 AK124273 AX747673 BC085604	-8565	+	AY894562 AY894570 NM_001039703	-128527	+	TSC_hg19_v1_chr1_+_145209107 NM_203458 BC010154 AK075065 BC090943 BC019835 AK092351 AK098372 AX747492 BC065219 AK293876 BC084572	-212707	+	TSC_hg19_v1_chr1_+_145438489 NM_006472 AK301203 BX537824 AK226090 S73591 BC093702 BC093704 AB527234 AY594328 BC024305 AK301148	16848	+	TSC_hg19_v1_chr1_-_145470375 AK092209 AK056984 BC004355 NM_032305 BC050418	48560	-	AK128050 NM_001039888 TSC_hg19_v1_chr1_+_145470529	48690	+	NM_145277|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_202004|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213652|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213653|HFE2|148738|hemochromatosis type 2 (juvenile)##AK223575|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092682|HFE2|148738|hemochromatosis type 2 (juvenile)##AK315852|HFE2|148738|hemochromatosis type 2 (juvenile)##BC017926|HFE2|148738|hemochromatosis type 2 (juvenile)##AK096905|HFE2|148738|hemochromatosis type 2 (juvenile)##AK290831|HFE2|148738|hemochromatosis type 2 (juvenile)##AK292742|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092692|HFE2|148738|hemochromatosis type 2 (juvenile)##AK124273|HFE2|148738|hemochromatosis type 2 (juvenile)##BC085604|HFE2|148738|hemochromatosis type 2 (juvenile)##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8##NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10##NM_203458|NOTCH2NL|388677|notch 2 N-terminal like##BC010154|NOTCH2NL|388677|notch 2 N-terminal like##AK075065|NOTCH2NL|388677|notch 2 N-terminal like##BC090943|NOTCH2NL|388677|notch 2 N-terminal like##BC019835|NOTCH2NL|388677|notch 2 N-terminal like##BC065219|NOTCH2NL|388677|notch 2 N-terminal like##BC084572|NOTCH2NL|388677|notch 2 N-terminal like##NM_006472|TXNIP|10628|thioredoxin interacting protein##AK301203|TXNIP|10628|thioredoxin interacting protein##BX537824|TXNIP|10628|thioredoxin interacting protein##AK226090|TXNIP|10628|thioredoxin interacting protein##S73591|TXNIP|10628|thioredoxin interacting protein##BC093702|TXNIP|10628|thioredoxin interacting protein##BC093704|TXNIP|10628|thioredoxin interacting protein##AY594328|TXNIP|10628|thioredoxin interacting protein##BC024305|TXNIP|10628|thioredoxin interacting protein##AK301148|TXNIP|10628|thioredoxin interacting protein##AK092209|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##AK056984|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC004355|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##NM_032305|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC050418|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##AK128050|ANKRD34A|284615|ankyrin repeat domain 34A##NM_001039888|ANKRD34A|284615|ankyrin repeat domain 34A	0.756853	CTCF.p2:-6:0.757
chr2	236504209	236504325	reg1003483.p1	14.442	+	TSC_hg19_v1_chr2_+_236403297 AB384114 AF413078	-100957	+	TSC_hg19_v1_chr2_+_236402950 BC140856	-101290	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	-101464	+	AK311262 TSC_hg19_v1_chr2_-_237076045	571747	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	572365	-	NM_212556 BX647589	668727	-	AF413078|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18	0.939716	CTCF.p2:-4:0.940
chr3	126471195	126471324	reg1003362.p1	14.442	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-48182	+	TSC_hg19_v1_chr3_-_126373968 NM_001173513 NM_052883	-97283	-	TSC_hg19_v1_chr3_-_126373947 AK299502 BC030028 BC050032	-97345	-	AB385178 NM_032242 X87832	236181	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	440735	+	AB037108 NM_016372	828020	-	AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_001173513|TXNRD3|114112|thioredoxin reductase 3##NM_052883|TXNRD3|114112|thioredoxin reductase 3##AK299502|TXNRD3|114112|thioredoxin reductase 3##BC030028|TXNRD3|114112|thioredoxin reductase 3##BC050032|TXNRD3|114112|thioredoxin reductase 3##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	0.95907	CTCF.p2:-10:0.959
chr4	166052541	166052663	reg1003200.p1	14.442	+	TSC_hg19_v1_chr4_-_166034013 NM_001100389	-18577	-	CU690322 BC036301 BX648915 BX538029 TSC_hg19_v1_chr4_-_166033990	-18641	-	AK093201 AX747987 NM_152620	-99452	+	NM_007246 TSC_hg19_v1_chr4_+_166128778 BC022503	76181	+	TSC_hg19_v1_chr4_+_166128825 BC036468 AF059569 AK315372 DQ893638 DQ895588 CU690356	76323	+	NM_001161521 NM_001161522 AK294103 BX647776	78576	+	NM_001100389|TMEM192|201931|transmembrane protein 192##BC036301|TMEM192|201931|transmembrane protein 192##BX648915|TMEM192|201931|transmembrane protein 192##BX538029|TMEM192|201931|transmembrane protein 192##AK093201|TRIM60|166655|tripartite motif containing 60##NM_152620|TRIM60|166655|tripartite motif containing 60##NM_007246|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BC022503|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BC036468|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AF059569|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AK315372|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##DQ893638|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##DQ895588|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	0.010739	
chr19	36040219	36040360	reg1003797.p1	14.441	+	TSC_hg19_v1_chr19_-_36036923 CR627053	-3381	-	TSC_hg19_v1_chr19_+_36036553 NM_001242597 NM_001242598 NM_032635 Y18007 BC001118 CU674562	-3745	+	TSC_hg19_v1_chr19_-_36036403 AK092032 AX747325	-3885	-	AK058032 AK223259 NM_000704	14270	-	TSC_hg19_v1_chr19_+_36103655 BC064390 NM_015302 BC171905 BC157882 AK307703 AB020648 BC013947	63382	+	TSC_hg19_v1_chr19_+_36119937 BC031682	79653	+	CR627053|LOC100506469|100506469|uncharacterized LOC100506469##NM_001242597|TMEM147|10430|transmembrane protein 147##NM_001242598|TMEM147|10430|transmembrane protein 147##NM_032635|TMEM147|10430|transmembrane protein 147##Y18007|TMEM147|10430|transmembrane protein 147##BC001118|TMEM147|10430|transmembrane protein 147##AK092032|LOC100506469|100506469|uncharacterized LOC100506469##AK058032|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##AK223259|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##NM_000704|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##BC064390|HAUS5|23354|HAUS augmin-like complex, subunit 5##NM_015302|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC171905|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC157882|HAUS5|23354|HAUS augmin-like complex, subunit 5##AK307703|HAUS5|23354|HAUS augmin-like complex, subunit 5##AB020648|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC013947|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC031682|RBM42|79171|RNA binding motif protein 42	0.998037	CTCF.p2:-13:0.998
chr6	42043388	42043509	reg1003507.p1	14.441	+	TSC_hg19_v1_chr6_+_42018268 BC018796 AF465841 CU689710	-25177	+	BC033728 NM_138572 TSC_hg19_v1_chr6_+_42018261 AK057383 BC119678 BC119679 AL833401	-25192	+	NM_001136017 NM_001136126	-26839	-	NM_001164446	67266	-	AK313865 NM_000409 BC031663 AK125780	79715	+	BX537393 NM_002098	119245	-	BC018796|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AF465841|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC033728|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##NM_138572|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AK057383|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119678|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119679|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AL833401|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##NM_001136017|CCND3|896|cyclin D3##NM_001136126|CCND3|896|cyclin D3##NM_001164446|C6orf132|647024|chromosome 6 open reading frame 132##AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)##NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)##BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)##AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)##BX537393|GUCA1B|2979|guanylate cyclase activator 1B (retina)##NM_002098|GUCA1B|2979|guanylate cyclase activator 1B (retina)	0.932906	CTCF.p2:-9:0.933
chr17	4884000	4884125	reg1003240.p1	14.440	+	BC007819 BC011934 TSC_hg19_v1_chr17_-_4871113 AF047437 AK312174 NM_004890	-12951	-	NM_001193503 NM_001976 NM_053013 TSC_hg19_v1_chr17_+_4854406 AK300662 AK300673 AK300709 AK309864 BC017249	-29658	+	TSC_hg19_v1_chr17_-_4851828 BC057828	-32218	-	AL831849 NM_001171167 NM_001171168 TSC_hg19_v1_chr17_-_4890732	6638	-	AB020716 BC167148 BC167149 BC167151 BC167160 EU832136 EU832229 TSC_hg19_v1_chr17_-_4890947 AK302528 AL833974 BC142695 NM_001171166 NM_015099	6890	-	AY601906 AY601907 NM_001167985 NM_001167986 NM_001167987 NM_213726	16842	-	BC007819|SPAG7|9552|sperm associated antigen 7##BC011934|SPAG7|9552|sperm associated antigen 7##AF047437|SPAG7|9552|sperm associated antigen 7##AK312174|SPAG7|9552|sperm associated antigen 7##NM_004890|SPAG7|9552|sperm associated antigen 7##NM_001193503|ENO3|2027|enolase 3 (beta, muscle)##NM_001976|ENO3|2027|enolase 3 (beta, muscle)##NM_053013|ENO3|2027|enolase 3 (beta, muscle)##AK300662|ENO3|2027|enolase 3 (beta, muscle)##AK300673|ENO3|2027|enolase 3 (beta, muscle)##AK300709|ENO3|2027|enolase 3 (beta, muscle)##AK309864|ENO3|2027|enolase 3 (beta, muscle)##BC017249|ENO3|2027|enolase 3 (beta, muscle)##BC057828|PFN1|5216|profilin 1##AL831849|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171167|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171168|CAMTA2|23125|calmodulin binding transcription activator 2##AB020716|CAMTA2|23125|calmodulin binding transcription activator 2##BC167148|CAMTA2|23125|calmodulin binding transcription activator 2##BC167149|CAMTA2|23125|calmodulin binding transcription activator 2##BC167151|CAMTA2|23125|calmodulin binding transcription activator 2##BC167160|CAMTA2|23125|calmodulin binding transcription activator 2##EU832136|CAMTA2|23125|calmodulin binding transcription activator 2##EU832229|CAMTA2|23125|calmodulin binding transcription activator 2##AK302528|CAMTA2|23125|calmodulin binding transcription activator 2##AL833974|CAMTA2|23125|calmodulin binding transcription activator 2##BC142695|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171166|CAMTA2|23125|calmodulin binding transcription activator 2##NM_015099|CAMTA2|23125|calmodulin binding transcription activator 2##AY601906|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##AY601907|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167985|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167986|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167987|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_213726|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1	0.072067	
chr8	48651553	48651686	reg1003141.p1	14.439	+	TSC_hg19_v1_chr8_-_48650725 BC023510 BC105109 NM_005195 M83667	-883	-	EU831483 EU831570 TSC_hg19_v1_chr8_-_48650683	-935	-	TSC_hg19_v1_chr8_+_48173546 D63480 BC031627 AK293809 AK293972 AK294275 AK297681	-478079	+	TSC_hg19_v1_chr8_-_48872697 AK296833	221070	-	TSC_hg19_v1_chr8_-_48872710 U34994 NM_001081640 NM_006904 U47077	221108	-	NM_005914 NM_182746	221143	+	BC105109|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##NM_005195|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##M83667|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##EU831483|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##EU831570|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##D63480|KIAA0146|23514|KIAA0146##AK293809|KIAA0146|23514|KIAA0146##AK293972|KIAA0146|23514|KIAA0146##AK294275|KIAA0146|23514|KIAA0146##AK297681|KIAA0146|23514|KIAA0146##AK296833|PRKDC|5591|protein kinase, DNA-activated, catalytic polypeptide##U34994|PRKDC|5591|protein kinase, DNA-activated, catalytic polypeptide##NM_001081640|PRKDC|5591|protein kinase, DNA-activated, catalytic polypeptide##NM_006904|PRKDC|5591|protein kinase, DNA-activated, catalytic polypeptide##U47077|PRKDC|5591|protein kinase, DNA-activated, catalytic polypeptide##NM_005914|MCM4|4173|minichromosome maintenance complex component 4##NM_182746|MCM4|4173|minichromosome maintenance complex component 4	0.441235	CTCF.p2:16:0.441
chr3	52254571	52254679	reg1001867.p1	14.437	+	TSC_hg19_v1_chr3_+_52232180 BC011798 BC063005 Y00451 X56351	-22422	+	TSC_hg19_v1_chr3_+_52232177 AK293190	-22450	+	TSC_hg19_v1_chr3_+_52232145 NM_199166 AK312566 NM_000688 AK300993 AB063322 AY260745	-22508	+	AF259262 NM_017442	5553	-	CR456732 CR533520 CU678412 AM392602 DQ891754 DQ894936 AB385234 AF109365 TSC_hg19_v1_chr3_-_52273109 BC003161 BC000327 Y17169	18459	-	TSC_hg19_v1_chr3_-_52273175 AL136773 BC016452 BC021003 NM_007284	18537	-	BC011798|ALAS1|211|aminolevulinate, delta-, synthase 1##Y00451|ALAS1|211|aminolevulinate, delta-, synthase 1##X56351|ALAS1|211|aminolevulinate, delta-, synthase 1##AK293190|ALAS1|211|aminolevulinate, delta-, synthase 1##NM_199166|ALAS1|211|aminolevulinate, delta-, synthase 1##AK312566|ALAS1|211|aminolevulinate, delta-, synthase 1##NM_000688|ALAS1|211|aminolevulinate, delta-, synthase 1##AK300993|ALAS1|211|aminolevulinate, delta-, synthase 1##AB063322|ALAS1|211|aminolevulinate, delta-, synthase 1##AY260745|ALAS1|211|aminolevulinate, delta-, synthase 1##AF259262|TLR9|54106|toll-like receptor 9##NM_017442|TLR9|54106|toll-like receptor 9##CR456732|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##CR533520|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##DQ891754|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##DQ894936|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##AF109365|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##BC003161|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##BC000327|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##Y17169|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##AL136773|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##BC016452|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##NM_007284|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	0.999857	CTCF.p2:-4:1.000
chr15	35370829	35370948	reg1002540.p1	14.436	+	NM_014106 TSC_hg19_v1_chr15_-_35280498	-90376	-	TSC_hg19_v1_chr15_-_35280489 BC071603 AK291438	-90434	-	AB384497 AK291615 BC127111 BC127112 TSC_hg19_v1_chr15_-_35261899 AB011132 AK315815 BX647820 EF553519 NM_014691	-108961	-	CU688170 TSC_hg19_v1_chr15_-_35838365 BC066652 AK094007 AL833427 AX748407 AK125017 NM_001141972 NM_080650	467498	-	TSC_hg19_v1_chr15_+_36871914 NM_001130010 AK026504 BC006254	1501011	+	NM_032499	1561917	+	NM_014106|ZNF770|54989|zinc finger protein 770##BC071603|ZNF770|54989|zinc finger protein 770##AK291438|ZNF770|54989|zinc finger protein 770##AK291615|AQR|9716|aquarius homolog (mouse)##BC127111|AQR|9716|aquarius homolog (mouse)##BC127112|AQR|9716|aquarius homolog (mouse)##AB011132|AQR|9716|aquarius homolog (mouse)##AK315815|AQR|9716|aquarius homolog (mouse)##BX647820|AQR|9716|aquarius homolog (mouse)##EF553519|AQR|9716|aquarius homolog (mouse)##NM_014691|AQR|9716|aquarius homolog (mouse)##BC066652|ATPBD4|89978|ATP binding domain 4##AK094007|ATPBD4|89978|ATP binding domain 4##AL833427|ATPBD4|89978|ATP binding domain 4##AK125017|ATPBD4|89978|ATP binding domain 4##NM_001141972|ATPBD4|89978|ATP binding domain 4##NM_080650|ATPBD4|89978|ATP binding domain 4##NM_001130010|C15orf41|84529|chromosome 15 open reading frame 41##AK026504|C15orf41|84529|chromosome 15 open reading frame 41##BC006254|C15orf41|84529|chromosome 15 open reading frame 41##NM_032499|C15orf41|84529|chromosome 15 open reading frame 41	0.962563	CTCF.p2:-10:0.963
chr10	64370541	64370676	reg1002077.p1	14.435	+	AJ505150 NM_199452	-90402	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-236565	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-342069	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	193934	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	194049	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	205489	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.072971	
chr10	43844026	43844153	reg1003530.p1	14.433	+	BC022548 NM_145313	-81723	-	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	-210147	+	TSC_hg19_v1_chr10_+_43572516 NM_020630 NM_020975 BC003072 BC004257 X15262 AK291807 AB384817 CU678360 CU678648 Y12528	-271486	+	BC054876 AY358584 NM_001184963 NM_173160	23001	+	TSC_hg19_v1_chr10_-_43892200 NM_001098208	48130	-	TSC_hg19_v1_chr10_-_43892677 BC106008	48591	-	BC022548|RASGEF1A|221002|RasGEF domain family, member 1A##NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A##AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_020630|RET|5979|ret proto-oncogene##NM_020975|RET|5979|ret proto-oncogene##BC003072|RET|5979|ret proto-oncogene##BC004257|RET|5979|ret proto-oncogene##X15262|RET|5979|ret proto-oncogene##AK291807|RET|5979|ret proto-oncogene##Y12528|RET|5979|ret proto-oncogene##BC054876|FXYD4|53828|FXYD domain containing ion transport regulator 4##AY358584|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001184963|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_173160|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##BC106008|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F	1.13902	CTCF.p2:1:0.999
chr11	45315270	45315369	reg1002466.p1	14.433	+	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	-7569	-	AF275818 NM_020229	-199756	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	-342902	-	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	371865	-	NM_001145265 NM_001145266	510303	+	TSC_hg19_v1_chr11_+_45825944 AK225428 AK002182 AK091245	510595	+	AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1##AK225428|SLC35C1|55343|solute carrier family 35, member C1##AK002182|SLC35C1|55343|solute carrier family 35, member C1##AK091245|SLC35C1|55343|solute carrier family 35, member C1	0.76357	CTCF.p2:17:0.764
chr12	50232906	50233019	reg1002614.p1	14.433	+	TSC_hg19_v1_chr12_-_50222197 NM_001037806	-10763	-	TSC_hg19_v1_chr12_+_50156978 AK026605	-75934	+	BC036203 TSC_hg19_v1_chr12_+_50135987	-96991	+	CU690986 BC053560 BC040957 AK292194 NM_181708	3927	-	CU674012 AB463040 TSC_hg19_v1_chr12_-_50297671 AB023167 BC000051 AK290031 AF190461 NM_012306	64705	-	AK225940 NM_000486 BC042496 S73196 S73197 CR542024	111606	+	NM_001037806|NCKAP5L|57701|NCK-associated protein 5-like##AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##BC036203|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##BC053560|BCDIN3D|144233|BCDIN3 domain containing##BC040957|BCDIN3D|144233|BCDIN3 domain containing##AK292194|BCDIN3D|144233|BCDIN3 domain containing##NM_181708|BCDIN3D|144233|BCDIN3 domain containing##AB023167|FAIM2|23017|Fas apoptotic inhibitory molecule 2##BC000051|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AK290031|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AF190461|FAIM2|23017|Fas apoptotic inhibitory molecule 2##NM_012306|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AK225940|AQP2|359|aquaporin 2 (collecting duct)##NM_000486|AQP2|359|aquaporin 2 (collecting duct)##BC042496|AQP2|359|aquaporin 2 (collecting duct)##S73196|AQP2|359|aquaporin 2 (collecting duct)##S73197|AQP2|359|aquaporin 2 (collecting duct)##CR542024|AQP2|359|aquaporin 2 (collecting duct)	0.327332	CTCF.p2:17:0.243
chr6	9251116	9251277	reg1004335.p1	14.433	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-815308	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-815488	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-1148406	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	1161420	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	1164079	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	1164272	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.315726	CTCF.p2:-7:0.316
chr16	74896752	74896902	reg1004341.p1	14.430	+	BC017049 TSC_hg19_v1_chr16_-_74808722 AK058016 AK303878 NM_024306	-88103	-	TSC_hg19_v1_chr16_-_74808693 AK315512 BC002679 BC004263	-88242	-	BC028141 AK091708 AX747141 NM_001142497 NM_152649	-162090	-	CU678744 TSC_hg19_v1_chr16_-_75018978 BC004519	122132	-	TSC_hg19_v1_chr16_-_75019011 NM_030581	122198	-	TSC_hg19_v1_chr16_+_75032911 NM_032268	136067	+	BC017049|FA2H|79152|fatty acid 2-hydroxylase##AK058016|FA2H|79152|fatty acid 2-hydroxylase##AK303878|FA2H|79152|fatty acid 2-hydroxylase##NM_024306|FA2H|79152|fatty acid 2-hydroxylase##AK315512|FA2H|79152|fatty acid 2-hydroxylase##BC002679|FA2H|79152|fatty acid 2-hydroxylase##BC004263|FA2H|79152|fatty acid 2-hydroxylase##BC028141|MLKL|197259|mixed lineage kinase domain-like##AK091708|MLKL|197259|mixed lineage kinase domain-like##NM_001142497|MLKL|197259|mixed lineage kinase domain-like##NM_152649|MLKL|197259|mixed lineage kinase domain-like##BC004519|WDR59|79726|WD repeat domain 59##NM_030581|WDR59|79726|WD repeat domain 59##NM_032268|ZNRF1|84937|zinc and ring finger 1	0.995092	CTCF.p2:13:0.995
chr5	96869928	96870051	reg1002584.p2	14.430	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-351002	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-351047	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	-351081	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	1235052	+	BC054860 BC117134 NM_001270 AF006513	1392239	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	3001084	+	NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A	0.989542	CTCF.p2:0:0.990
chr17	79917668	79917791	reg1003628.p1	14.429	+	BC029306 NM_001145113	-12621	-	AF218000 NM_006907 NM_153824 TSC_hg19_v1_chr17_-_79895136 AK297627 BC071842 AK303852 AK225879	-22648	-	TSC_hg19_v1_chr17_+_79885722 BC101984 BC101987 BC104740 BC134411 BC046361 BC025326 BC063671	-32010	+	NM_178493 TSC_hg19_v1_chr17_-_79919064 BC060882	1333	-	TSC_hg19_v1_chr17_+_79935477 AK057403 NM_001251888 NM_024083	17719	+	TSC_hg19_v1_chr17_+_79935513 AF324219 AK290624 AK057851 BC018722 CU676290 DQ892522 DQ895734 AK226086	17793	+	BC029306|MYADML2|255275|myeloid-associated differentiation marker-like 2##NM_001145113|MYADML2|255275|myeloid-associated differentiation marker-like 2##AF218000|PYCR1|5831|pyrroline-5-carboxylate reductase 1##NM_006907|PYCR1|5831|pyrroline-5-carboxylate reductase 1##NM_153824|PYCR1|5831|pyrroline-5-carboxylate reductase 1##AK297627|PYCR1|5831|pyrroline-5-carboxylate reductase 1##BC071842|PYCR1|5831|pyrroline-5-carboxylate reductase 1##AK225879|PYCR1|5831|pyrroline-5-carboxylate reductase 1##BC134411|LOC92659|92659|uncharacterized LOC92659##BC046361|LOC92659|92659|uncharacterized LOC92659##BC025326|LOC92659|92659|uncharacterized LOC92659##BC063671|LOC92659|92659|uncharacterized LOC92659##NM_178493|NOTUM|147111|notum pectinacetylesterase homolog (Drosophila)##BC060882|NOTUM|147111|notum pectinacetylesterase homolog (Drosophila)##AK057403|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##NM_001251888|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##NM_024083|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AF324219|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK290624|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK057851|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##BC018722|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##DQ892522|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##DQ895734|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK226086|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1	0.249838	CTCF.p2:12:0.250
chr4	6266043	6266148	reg1002558.p1	14.428	+	TSC_hg19_v1_chr4_-_6202277 AK294356 AK307983 AK056126 AM412307 AM412308 AM412309 AM412310 BC026343 NM_001099433 NM_144720	-63811	-	DQ206871 TSC_hg19_v1_chr4_-_5894794 NM_001014809	-371351	-	BC009987 TSC_hg19_v1_chr4_-_5891940	-374167	-	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	5473	+	Y18064 TSC_hg19_v1_chr4_+_6271588	5499	+	TSC_hg19_v1_chr4_+_6271608 AK295986 BC030130 AK312897	5531	+	AK294356|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK307983|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK056126|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412307|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412308|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412309|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412310|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##BC026343|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_001099433|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_144720|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##DQ206871|CRMP1|1400|collapsin response mediator protein 1##NM_001014809|CRMP1|1400|collapsin response mediator protein 1##BC009987|CRMP1|1400|collapsin response mediator protein 1##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)##AK295986|WFS1|7466|Wolfram syndrome 1 (wolframin)##BC030130|WFS1|7466|Wolfram syndrome 1 (wolframin)##AK312897|WFS1|7466|Wolfram syndrome 1 (wolframin)	0.67162	CTCF.p2:-5:0.672
chr8	59307880	59308012	reg1003616.p1	14.428	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-400789	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1401520	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1401544	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	15939	+	X56088 M93133 BC101777 BC112184 NM_000780	104761	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	157806	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.970807	CTCF.p2:3:0.971
chr22	36327109	36327248	reg1004802.p1	14.427	+	TSC_hg19_v1_chr22_-_36236476 AF229058 AL009266 AK314632 BC013115 BC025281 AK291460 NM_001031695 NM_001082576 NM_001082577 NM_014309	-90653	-	CR456559 TSC_hg19_v1_chr22_-_36236341	-90838	-	AB463238 AB649123 AY960684 CU013159 CU013447 CU692956 DQ891720 DQ894897 DQ894898 TSC_hg19_v1_chr22_-_36236318	-90887	-	AY072786 DQ778625 TSC_hg19_v1_chr22_-_36424553 AK055213 NM_001082578 NM_001082579	97361	-	BC042918 BC038352 AK025349 AF070675 BC070144 AF305227 BC050596 AY014902 AY014903 AY014904 AY014905 NM_145640	229700	-	AY014906 AY014907 NM_145641 NM_145642	235046	-	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AY072786|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ778625|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK055213|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082578|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082579|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC042918|APOL3|80833|apolipoprotein L, 3##BC038352|APOL3|80833|apolipoprotein L, 3##AK025349|APOL3|80833|apolipoprotein L, 3##AF070675|APOL3|80833|apolipoprotein L, 3##AF305227|APOL3|80833|apolipoprotein L, 3##BC050596|APOL3|80833|apolipoprotein L, 3##AY014902|APOL3|80833|apolipoprotein L, 3##AY014903|APOL3|80833|apolipoprotein L, 3##AY014904|APOL3|80833|apolipoprotein L, 3##AY014905|APOL3|80833|apolipoprotein L, 3##NM_145640|APOL3|80833|apolipoprotein L, 3##AY014906|APOL3|80833|apolipoprotein L, 3##AY014907|APOL3|80833|apolipoprotein L, 3##NM_145641|APOL3|80833|apolipoprotein L, 3##NM_145642|APOL3|80833|apolipoprotein L, 3	0.468448	CTCF.p2:-9:0.468
chr11	72193425	72193553	reg1003748.p1	14.426	+	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	-47839	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	-47913	-	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	-48034	-	TSC_hg19_v1_chr11_-_72353458 AY495089 AK131525 AK092278 AX747449 NM_001143839 NM_001243784	159990	-	AY495087 NM_001146209	186618	-	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	191964	-	AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK131525|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK092278|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001143839|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001243784|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	0.373496	CTCF.p2:-7:0.373
chr3	18799719	18799842	reg1002794.p1	14.426	+	BC001744 NM_001131010	-319547	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	-332983	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-1015613	-	AK295633 AY053503 NM_144633 AB209053 AK309034	390224	+	BC028198 AK097644 NM_144715	1175908	-	TSC_hg19_v1_chr3_+_19988586 NM_004162	1188909	+	BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##BC028198|EFHB|151651|EF-hand domain family, member B##AK097644|EFHB|151651|EF-hand domain family, member B##NM_144715|EFHB|151651|EF-hand domain family, member B##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family	0.862989	CTCF.p2:13:0.863
chr9	91208854	91208966	reg1002340.p1	14.426	+	NM_001161625 NM_145283 BC022521	-58893	+	TSC_hg19_v1_chr9_+_91003988 AK315854	-204912	+	TSC_hg19_v1_chr9_+_91003366 NM_006717 BC013571 AL136719 AK092017 AX747313 AF087864 AF106682 AK290009	-205577	+	BC101432 BC101439 BC101440 BC101442 AK098532 NM_001100111	58129	-	AK094842 NM_001001938 NM_001142413 AK127854 BC144432 BC136895 AY333281	396933	+	TSC_hg19_v1_chr9_+_91606382 AK312798 BC060827 NM_005226	397460	+	NM_001161625|NXNL2|158046|nucleoredoxin-like 2##NM_145283|NXNL2|158046|nucleoredoxin-like 2##BC022521|NXNL2|158046|nucleoredoxin-like 2##AK315854|SPIN1|10927|spindlin 1##NM_006717|SPIN1|10927|spindlin 1##BC013571|SPIN1|10927|spindlin 1##AL136719|SPIN1|10927|spindlin 1##AK092017|SPIN1|10927|spindlin 1##AF087864|SPIN1|10927|spindlin 1##AF106682|SPIN1|10927|spindlin 1##AK290009|SPIN1|10927|spindlin 1##BC101432|LOC286238|286238|uncharacterized LOC286238##BC101439|LOC286238|286238|uncharacterized LOC286238##BC101440|LOC286238|286238|uncharacterized LOC286238##BC101442|LOC286238|286238|uncharacterized LOC286238##AK098532|LOC286238|286238|uncharacterized LOC286238##NM_001100111|LOC286238|286238|uncharacterized LOC286238##AK094842|C9orf47|286223|chromosome 9 open reading frame 47##NM_001001938|C9orf47|286223|chromosome 9 open reading frame 47##NM_001142413|C9orf47|286223|chromosome 9 open reading frame 47##AK127854|C9orf47|286223|chromosome 9 open reading frame 47##BC144432|C9orf47|286223|chromosome 9 open reading frame 47##BC136895|C9orf47|286223|chromosome 9 open reading frame 47##AY333281|C9orf47|286223|chromosome 9 open reading frame 47##AK312798|S1PR3|1903|sphingosine-1-phosphate receptor 3##BC060827|S1PR3|1903|sphingosine-1-phosphate receptor 3##NM_005226|S1PR3|1903|sphingosine-1-phosphate receptor 3	0.349384	CTCF.p2:-9:0.349
chr10	24649571	24649715	reg1004235.p1	14.425	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	-151549	+	AK091142 AX746804 NM_001098501 NM_019590 TSC_hg19_v1_chr10_+_24497850	-151855	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	-665966	+	TSC_hg19_v1_chr10_+_24755441 AK300422	105801	+	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	105826	+	AK307604 TSC_hg19_v1_chr10_-_25012174	362530	-	AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK091142|KIAA1217|56243|KIAA1217##NM_001098501|KIAA1217|56243|KIAA1217##NM_019590|KIAA1217|56243|KIAA1217##AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217##BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21	0.911475	CTCF.p2:0:0.911
chr15	77789273	77789389	reg1001608.p1	14.425	+	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-76069	+	TSC_hg19_v1_chr15_+_77713043 AK297449 AK311376	-76300	+	TSC_hg19_v1_chr15_-_77712437 NM_024776	-76788	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	135368	-	TSC_hg19_v1_chr15_-_77924732 AK291363	135449	-	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	580622	-	AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AK297449|HMG20A|10363|high mobility group 20A##NM_024776|PEAK1|79834|NKF3 kinase family member##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B	0.992434	CTCF.p2:10:0.992
chr16	86050079	86050225	reg1003569.p1	14.425	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-117366	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-216817	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-216847	+	TSC_hg19_v1_chr16_-_86542463 AK091834	492312	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	494004	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	494088	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.899667	CTCF.p2:32:0.900
chr5	103144314	103144430	reg1002418.p1	14.425	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-245891	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-549915	+	BC024591 NM_015216 AB463068	-679098	+	AK308672 NM_001962 U26403	3862218	-	TSC_hg19_v1_chr5_-_107717106 AK126722	4572758	-	BC063316 NM_001163315	4573426	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.407378	CTCF.p2:-6:0.407
chr2	54749962	54750094	reg1002658.p1	14.423	+	TSC_hg19_v1_chr2_+_54684338 BC032061	-65661	+	TSC_hg19_v1_chr2_+_54683463 NM_003128 AB371586 AB209748	-66416	+	AK097617 NM_001100396 BC126244 BC126246 BC144191 BC144192 BC031669	-191940	+	TSC_hg19_v1_chr2_+_54785519 AF327441 NM_178313 BC137282 BC137283	35537	+	NM_001039753	202120	+	TSC_hg19_v1_chr2_-_55199899 BC131571	449880	-	BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AK097617|C2orf73|129852|chromosome 2 open reading frame 73##NM_001100396|C2orf73|129852|chromosome 2 open reading frame 73##BC126244|C2orf73|129852|chromosome 2 open reading frame 73##BC126246|C2orf73|129852|chromosome 2 open reading frame 73##BC144191|C2orf73|129852|chromosome 2 open reading frame 73##BC144192|C2orf73|129852|chromosome 2 open reading frame 73##BC031669|C2orf73|129852|chromosome 2 open reading frame 73##AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_001039753|EML6|400954|echinoderm microtubule associated protein like 6	0.998651	CTCF.p2:-1:0.999
chr8	27454776	27454894	reg1003154.p1	14.423	+	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	-106177	+	AK314787 U62431 NM_000742	-118064	-	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-271758	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	17370	-	AB527877 TSC_hg19_v1_chr8_-_27472317 NM_001831	17477	-	BC060811 TSC_hg19_v1_chr8_+_27491395	36554	+	AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin##NM_001831|CLU|1191|clusterin##BC060811|SCARA3|51435|scavenger receptor class A, member 3	0.743701	CTCF.p2:10:0.615
chr14	97050660	97050816	reg1003667.p1	14.422	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-81954	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-81992	+	TSC_hg19_v1_chr14_+_96968718 NM_001252006 NM_001252007 NM_032632 AK302406 BC036014	-82029	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	212977	+	AK098639 NM_182560	2127211	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	2686879	-	BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##NM_001252006|PAPOLA|10914|poly(A) polymerase alpha##NM_001252007|PAPOLA|10914|poly(A) polymerase alpha##NM_032632|PAPOLA|10914|poly(A) polymerase alpha##AK302406|PAPOLA|10914|poly(A) polymerase alpha##BC036014|PAPOLA|10914|poly(A) polymerase alpha##NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.560181	CTCF.p2:48:0.382
chr8	101859423	101859550	reg1002494.p1	14.422	+	BC041863 TSC_hg19_v1_chr8_-_101734972	-124520	-	Y00345 TSC_hg19_v1_chr8_-_101734316 AK130523 AK303120 NM_002568	-125169	-	BC015958 BC023217 BC023520 TSC_hg19_v1_chr8_-_101734301	-125191	-	TSC_hg19_v1_chr8_-_101936525 DQ185048	77038	-	TSC_hg19_v1_chr8_-_101962797 NM_001135702	103313	-	TSC_hg19_v1_chr8_-_101963538 NM_001135700 NM_001135701	103976	-	BC041863|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##Y00345|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK130523|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK303120|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##NM_002568|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC015958|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023217|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023520|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ185048|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135702|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135700|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135701|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	0.479205	CTCF.p2:-6:0.479
chr20	36686046	36686192	reg1003315.p1	14.421	+	TSC_hg19_v1_chr20_+_36662228 AB463518 CU689672	-23842	+	TSC_hg19_v1_chr20_+_36662168 BC033629 AK312468 BC001696	-23952	+	TSC_hg19_v1_chr20_+_36661917 NM_021215 DQ372938	-24158	+	TSC_hg19_v1_chr20_-_36758362 M98479	72272	-	TSC_hg19_v1_chr20_-_36793673 AK291714 AK058031 AK295775 AK300292 AK314618 BC003551 NM_004613 NM_198951	107560	-	AK096202 NM_001029864	203054	-	BC033629|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##AK312468|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##BC001696|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##NM_021215|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##DQ372938|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##M98479|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291714|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK058031|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK295775|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK300292|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK314618|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC003551|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_004613|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_198951|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755	1.010402	CTCF.p2:0:1.000
chr1	111158487	111158621	reg1004020.p1	14.420	+	AK290061 NM_004974 TSC_hg19_v1_chr1_-_111148981	-9572	-	NM_005549	-96758	-	AY358683 AF333024 NM_032414 AY029225 BC025399 DQ891570 DQ894763	-164763	+	BC043564 NM_001204269	15541	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	58798	-	TSC_hg19_v1_chr1_-_111217553 AK314009	58990	-	AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_005549|KCNA10|3744|potassium voltage-gated channel, shaker-related subfamily, member 10##AY358683|PROK1|84432|prokineticin 1##AF333024|PROK1|84432|prokineticin 1##NM_032414|PROK1|84432|prokineticin 1##AY029225|PROK1|84432|prokineticin 1##BC025399|PROK1|84432|prokineticin 1##DQ891570|PROK1|84432|prokineticin 1##DQ894763|PROK1|84432|prokineticin 1##BC043564|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_001204269|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3	0.421356	CTCF.p2:9:0.421
chr8	12357394	12357528	reg1003761.p1	14.420	+	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-63557	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-63618	-	DQ012022 NM_001037804 NM_001195257	-181637	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	255543	-	AK296010 NM_020844	445705	+	AB040889 NM_001099677	512311	+	BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456	0.998481	CTCF.p2:-8:0.998
chr22	36866392	36866529	reg1003670.p1	14.419	+	TSC_hg19_v1_chr22_-_36784062 NM_002473	-82402	-	TSC_hg19_v1_chr22_-_36784013 AK304840 AK291609 AB191263	-82452	-	AK131080 TSC_hg19_v1_chr22_-_36783982 BC049849	-82481	-	TSC_hg19_v1_chr22_-_36877665 BC013726 BC050610 AF480262 NM_012473 CR456601	11219	-	TSC_hg19_v1_chr22_-_36903081 BC027716 BC015726	36598	-	AK025714 AK225347 TSC_hg19_v1_chr22_-_36903088 AK315555 NM_024955 BC040351 NM_001102371	36657	-	NM_002473|MYH9|4627|myosin, heavy chain 9, non-muscle##AK304840|MYH9|4627|myosin, heavy chain 9, non-muscle##AK291609|MYH9|4627|myosin, heavy chain 9, non-muscle##AB191263|MYH9|4627|myosin, heavy chain 9, non-muscle##AK131080|MYH9|4627|myosin, heavy chain 9, non-muscle##BC049849|MYH9|4627|myosin, heavy chain 9, non-muscle##BC013726|TXN2|25828|thioredoxin 2##BC050610|TXN2|25828|thioredoxin 2##AF480262|TXN2|25828|thioredoxin 2##NM_012473|TXN2|25828|thioredoxin 2##CR456601|TXN2|25828|thioredoxin 2##BC027716|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC015726|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	0.999159	CTCF.p2:14:0.999
chr11	26671456	26671581	reg1002497.p2	14.418	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	-77778	-	NM_031418 AK302659	-317788	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-2152869	+	BC049207 NM_178498	72041	-	NM_203371 TSC_hg19_v1_chr11_+_27015658	344124	+	TSC_hg19_v1_chr11_+_27015673 AK310616	344152	+	AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)	0.999459	CTCF.p2:0:0.999
chr16	75419567	75419692	reg1003633.p1	14.418	+	AK124815 NM_001170715	-117679	-	AK295809 NM_001170716	-118937	-	TSC_hg19_v1_chr16_-_75299906 AK302617 NM_001170720 AK027608 AK293808 NM_001170714 NM_001170718	-119804	-	BT009819 CR542111 AB463545 CU674490 DQ890998 EU176574 AK313948 TSC_hg19_v1_chr16_-_75467369 AB009285 D85939 BC000991 NM_006324 AK226031	47696	-	TSC_hg19_v1_chr16_-_75498315 AK094930	78668	-	AM392693 AM393662 AY302139 CU676164 TSC_hg19_v1_chr16_-_75498577	78909	-	AK124815|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170715|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK295809|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170716|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK302617|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170720|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK027608|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK293808|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170714|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170718|BCAR1|9564|breast cancer anti-estrogen resistance 1##BT009819|CFDP1|10428|craniofacial development protein 1##CR542111|CFDP1|10428|craniofacial development protein 1##DQ890998|CFDP1|10428|craniofacial development protein 1##EU176574|CFDP1|10428|craniofacial development protein 1##AK313948|CFDP1|10428|craniofacial development protein 1##AB009285|CFDP1|10428|craniofacial development protein 1##D85939|CFDP1|10428|craniofacial development protein 1##BC000991|CFDP1|10428|craniofacial development protein 1##NM_006324|CFDP1|10428|craniofacial development protein 1##AK226031|CFDP1|10428|craniofacial development protein 1##AK094930|TMEM170A|124491|transmembrane protein 170A##AY302139|TMEM170A|124491|transmembrane protein 170A	0.979413	CTCF.p2:-2:0.979
chr2	95689010	95689126	reg1002384.p3	14.418	+	AK097438 BC021716 NM_144705 AK296678 CU692394	-151818	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3841065	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-5477350	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	2414	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	98474	-	AB049940 TSC_hg19_v1_chr2_-_95787749 BC014172 NM_031902	98644	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5##AB049940|MRPS5|64969|mitochondrial ribosomal protein S5##BC014172|MRPS5|64969|mitochondrial ribosomal protein S5##NM_031902|MRPS5|64969|mitochondrial ribosomal protein S5	0.75088	CTCF.p2:-8:0.751
chr18	20711810	20711949	reg1004106.p1	14.417	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-198064	+	TSC_hg19_v1_chr18_+_20513319 NM_002894 U72066 AK292481	-198531	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	-714054	-	EF028204 NM_001100619	3847	+	BC037218 NM_138375	23909	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	305992	-	BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##NM_002894|RBBP8|5932|retinoblastoma binding protein 8##U72066|RBBP8|5932|retinoblastoma binding protein 8##AK292481|RBBP8|5932|retinoblastoma binding protein 8##HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241	0.999049	CTCF.p2:-13:0.999
chr7	104524240	104524379	reg1003791.p1	14.417	+	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-555091	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-675878	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-894313	-	TSC_hg19_v1_chr7_-_104567089 BC050337	42781	-	TSC_hg19_v1_chr7_-_104653491 AK124046	129173	-	TSC_hg19_v1_chr7_-_104654062 AK094372	129765	-	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##BC050337|LOC723809|723809|uncharacterized LOC723809##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545	0.999879	CTCF.p2:-12:1.000
chr1	172059500	172059639	reg1003276.p1	14.416	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-248866	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-308731	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-308755	+	AL035295 NM_139240 BC038410	330259	+	TSC_hg19_v1_chr1_-_172413202 BC006539	353619	-	TSC_hg19_v1_chr1_-_172413207 AK308201	353638	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.179237	
chr13	96033066	96033191	reg1002644.p2	14.416	+	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	-79416	-	X65666 X71136 AB464716 NM_007084	-668810	-	TSC_hg19_v1_chr13_+_95254110 NM_180989 BC033906 BC052243 AK126794	-779026	+	NM_001160100 NM_182848 AK055855	52726	+	TSC_hg19_v1_chr13_+_96204946 NM_006984 BC010920 U89916 AK315737 DQ892831 DQ896077 CR456845	171846	+	AB385415 AF272347 AF272348 TSC_hg19_v1_chr13_-_96294398	261215	-	AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##NM_180989|GPR180|160897|G protein-coupled receptor 180##BC033906|GPR180|160897|G protein-coupled receptor 180##BC052243|GPR180|160897|G protein-coupled receptor 180##AK126794|GPR180|160897|G protein-coupled receptor 180##NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10##NM_006984|CLDN10|9071|claudin 10##BC010920|CLDN10|9071|claudin 10##U89916|CLDN10|9071|claudin 10##AK315737|CLDN10|9071|claudin 10##DQ892831|CLDN10|9071|claudin 10##DQ896077|CLDN10|9071|claudin 10##CR456845|CLDN10|9071|claudin 10##AF272347|DZIP1|22873|DAZ interacting protein 1##AF272348|DZIP1|22873|DAZ interacting protein 1	0.998714	CTCF.p2:8:0.999
chr18	12237325	12237450	reg1003328.p1	14.415	+	TSC_hg19_v1_chr18_+_11981575 BC017176 AF200432 BT007061	-255777	+	TSC_hg19_v1_chr18_+_11981502 BC031560	-255888	+	TSC_hg19_v1_chr18_+_11981424 AF014398 NM_014214	-255958	+	NM_001279 AK122762 AF041378 AY364639	16962	+	TSC_hg19_v1_chr18_+_12308239 AK001295 AK092677 AK311364	70851	+	TSC_hg19_v1_chr18_+_12308246 AK022340 AK098440 AK304616 BC002654 NM_032525 AK298196 BC039717 AB590145 DQ893486 DQ896394	70878	+	BC017176|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##AF200432|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BT007061|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BC031560|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##AF014398|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##NM_014214|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##NM_001279|CIDEA|1149|cell death-inducing DFFA-like effector a##AK122762|CIDEA|1149|cell death-inducing DFFA-like effector a##AF041378|CIDEA|1149|cell death-inducing DFFA-like effector a##AY364639|CIDEA|1149|cell death-inducing DFFA-like effector a##AK001295|TUBB6|84617|tubulin, beta 6 class V##AK092677|TUBB6|84617|tubulin, beta 6 class V##AK311364|TUBB6|84617|tubulin, beta 6 class V##AK022340|TUBB6|84617|tubulin, beta 6 class V##AK098440|TUBB6|84617|tubulin, beta 6 class V##AK304616|TUBB6|84617|tubulin, beta 6 class V##BC002654|TUBB6|84617|tubulin, beta 6 class V##NM_032525|TUBB6|84617|tubulin, beta 6 class V##AK298196|TUBB6|84617|tubulin, beta 6 class V##DQ893486|TUBB6|84617|tubulin, beta 6 class V##DQ896394|TUBB6|84617|tubulin, beta 6 class V	0.999328	CTCF.p2:-2:0.999
chr4	74439558	74439679	reg1001838.p1	14.415	+	AK290556 NM_001133 BC109020 BC109021 L35486	-92148	+	NM_001134 V01514 AK297669 TSC_hg19_v1_chr4_+_74301937 AK297674 AK314817 BC027881 DQ890942 DQ894103 CU693306	-137663	+	X51365 X51363 X51364 TSC_hg19_v1_chr4_+_74286879	-152756	+	AY217664 BC058835 NM_177532 AY217665 CR749283 AK126346 NM_201431	46601	-	NM_000584 Y00787 AK131067 AK311874 M17017 M26383 BC013615 AF043337 AB590232 DQ890564 DQ893727 BT007067 CR542151 Z11686	166680	+	NM_002993 AK311981 U81234 BC013744 DQ891500 DQ894692 AB463491	262751	+	AK290556|AFM|173|afamin##NM_001133|AFM|173|afamin##BC109020|AFM|173|afamin##BC109021|AFM|173|afamin##L35486|AFM|173|afamin##NM_001134|AFP|174|alpha-fetoprotein##V01514|AFP|174|alpha-fetoprotein##AK297669|AFP|174|alpha-fetoprotein##AK297674|AFP|174|alpha-fetoprotein##AK314817|AFP|174|alpha-fetoprotein##BC027881|AFP|174|alpha-fetoprotein##DQ890942|AFP|174|alpha-fetoprotein##DQ894103|AFP|174|alpha-fetoprotein##X51365|ALB|213|albumin##X51363|ALB|213|albumin##X51364|ALB|213|albumin##AY217664|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##BC058835|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_177532|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AY217665|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##CR749283|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK126346|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_201431|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_000584|IL8|3576|interleukin 8##Y00787|IL8|3576|interleukin 8##AK131067|IL8|3576|interleukin 8##AK311874|IL8|3576|interleukin 8##M17017|IL8|3576|interleukin 8##M26383|IL8|3576|interleukin 8##BC013615|IL8|3576|interleukin 8##DQ890564|IL8|3576|interleukin 8##DQ893727|IL8|3576|interleukin 8##BT007067|IL8|3576|interleukin 8##CR542151|IL8|3576|interleukin 8##Z11686|IL8|3576|interleukin 8##NM_002993|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##AK311981|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##U81234|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##BC013744|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ891500|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ894692|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)	0.990071	CTCF.p2:-15:0.990
chr10	125341787	125341903	reg1002543.p1	14.413	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-427489	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-427899	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-427947	+	AJ505757 NM_153442 BC112011 BC113462	84032	+	BC137492 BC146862 AY358565 NM_198148	309651	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	510054	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.17684	
chr1	160921292	160921410	reg1003613.p1	14.412	+	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	-66393	-	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	-88773	-	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	-155353	+	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	3208	-	BT020103 CR533512 DQ892228 DQ895428 EU831648 EU831732 AB528601 AF207907 AK304412 TSC_hg19_v1_chr1_-_160990931 BC001533 AY358896 AK026665 AF154005 AK075152 AL136649	69547	-	TSC_hg19_v1_chr1_-_160990981 NM_016946	69700	-	AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2##BT020103|F11R|50848|F11 receptor##CR533512|F11R|50848|F11 receptor##DQ892228|F11R|50848|F11 receptor##DQ895428|F11R|50848|F11 receptor##EU831648|F11R|50848|F11 receptor##EU831732|F11R|50848|F11 receptor##AF207907|F11R|50848|F11 receptor##AK304412|F11R|50848|F11 receptor##BC001533|F11R|50848|F11 receptor##AY358896|F11R|50848|F11 receptor##AK026665|F11R|50848|F11 receptor##AF154005|F11R|50848|F11 receptor##AK075152|F11R|50848|F11 receptor##AL136649|F11R|50848|F11 receptor##NM_016946|F11R|50848|F11 receptor	0.982454	CTCF.p2:0:0.962
chr15	51455188	51455318	reg1004001.p1	14.412	+	AY517501 NM_207381	-57781	-	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	-68403	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	-254326	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	175511	-	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	178541	+	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	459720	-	AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2	0.997819	CTCF.p2:-10:0.998
chr5	156739561	156739677	reg1003542.p1	14.412	+	BC011762 BC021008 NM_014376	-43263	+	TSC_hg19_v1_chr5_+_156693105 AL136549 NM_001037333 AK294220 AK295865 AK297401 AK303702 AB032994 AF160973 NM_001037332	-46367	+	BC094701 AB209622 D13720 NM_005546 BC109077 BC109078 AK312846 AK303609 AB590549	-131702	+	AK289701 BC022570 NM_001001343	33081	-	TSC_hg19_v1_chr5_+_156820161 AK172724	80569	+	AK296972 NM_001099287 NM_001172292	147407	+	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB209622|ITK|3702|IL2-inducible T-cell kinase##D13720|ITK|3702|IL2-inducible T-cell kinase##NM_005546|ITK|3702|IL2-inducible T-cell kinase##BC109077|ITK|3702|IL2-inducible T-cell kinase##BC109078|ITK|3702|IL2-inducible T-cell kinase##AK312846|ITK|3702|IL2-inducible T-cell kinase##AK303609|ITK|3702|IL2-inducible T-cell kinase##AK289701|FNDC9|408263|fibronectin type III domain containing 9##BC022570|FNDC9|408263|fibronectin type III domain containing 9##NM_001001343|FNDC9|408263|fibronectin type III domain containing 9##AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK296972|NIPAL4|348938|NIPA-like domain containing 4##NM_001099287|NIPAL4|348938|NIPA-like domain containing 4##NM_001172292|NIPAL4|348938|NIPA-like domain containing 4	0.708874	CTCF.p2:-6:0.709
chr20	52029787	52029909	reg1003048.p1	14.411	+	AK302570 NM_001193421	-228027	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	-440070	+	BX640770 NM_173485	-440903	+	AF041259 NM_006526	169787	-	TSC_hg19_v1_chr20_-_52210810 AK290350	180951	-	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	657214	-	AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK290350|ZNF217|7764|zinc finger protein 217##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1	0.232832	CTCF.p2:4:0.233
chr14	105556946	105557068	reg1003893.p1	14.409	+	TSC_hg19_v1_chr14_-_105531768 AB465599 AB465600 AK292142 AK303654 AX775935 AX775841	-25234	-	TSC_hg19_v1_chr14_-_105531756 AF083955 AX775937 NM_013345 EU543705	-25259	-	TSC_hg19_v1_chr14_-_105487428 NM_017955 NM_145701	-69583	-	Y14330 AF003521 AF020201 TSC_hg19_v1_chr14_-_105634835 BC032053	77784	-	TSC_hg19_v1_chr14_-_105635114 AF029778 AF029779 NM_002226 NM_145159	78130	-	TSC_hg19_v1_chr14_-_105647650 AB087802 HQ257983 BC041584 AK128196 AK310449 NM_177533	90587	-	AB465599|GPR132|29933|G protein-coupled receptor 132##AB465600|GPR132|29933|G protein-coupled receptor 132##AK292142|GPR132|29933|G protein-coupled receptor 132##AK303654|GPR132|29933|G protein-coupled receptor 132##AX775935|GPR132|29933|G protein-coupled receptor 132##AX775841|GPR132|29933|G protein-coupled receptor 132##AF083955|GPR132|29933|G protein-coupled receptor 132##NM_013345|GPR132|29933|G protein-coupled receptor 132##EU543705|GPR132|29933|G protein-coupled receptor 132##NM_017955|CDCA4|55038|cell division cycle associated 4##NM_145701|CDCA4|55038|cell division cycle associated 4##Y14330|JAG2|3714|jagged 2##AF003521|JAG2|3714|jagged 2##AF020201|JAG2|3714|jagged 2##BC032053|JAG2|3714|jagged 2##AF029778|JAG2|3714|jagged 2##AF029779|JAG2|3714|jagged 2##NM_002226|JAG2|3714|jagged 2##NM_145159|JAG2|3714|jagged 2##AB087802|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##HQ257983|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##BC041584|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AK128196|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##NM_177533|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14	0.997768	CTCF.p2:-3:0.998
chr17	19022160	19022290	reg1003199.p1	14.408	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-71939	-	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-114146	-	AK057946 NM_001042450 NM_152351 AK298345 BC062617 BC034380	-166721	+	BC157869 NM_001129778	8556	+	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	118483	+	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	243744	-	BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##AK057946|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001042450|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_152351|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##AK298345|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC062617|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC034380|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1	0.426422	CTCF.p2:-20:0.426
chr22	20445114	20445230	reg1002716.p1	14.408	+	BC072398 TSC_hg19_v1_chr22_-_20427830	-17342	-	NM_001242313	-67504	+	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	-137603	-	NM_015672	16613	-	TSC_hg19_v1_chr22_+_20748463 BC056902 X92715 AK291358 AK299569 NM_003426 BC048295 BC013741	303273	+	AB052951 TSC_hg19_v1_chr22_-_20792077	346890	-	BC072398|PI4KAP1|728233|phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1##NM_001242313|TMEM191B|728229|transmembrane protein 191B##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_015672|RIMBP3|85376|RIMS binding protein 3##BC056902|ZNF74|7625|zinc finger protein 74##X92715|ZNF74|7625|zinc finger protein 74##AK291358|ZNF74|7625|zinc finger protein 74##AK299569|ZNF74|7625|zinc finger protein 74##NM_003426|ZNF74|7625|zinc finger protein 74##BC048295|ZNF74|7625|zinc finger protein 74##BC013741|ZNF74|7625|zinc finger protein 74##AB052951|SCARF2|91179|scavenger receptor class F, member 2	0.997382	CTCF.p2:2:0.997
chr2	102857384	102857524	reg1002552.p2	14.407	+	AF284434 NM_003854 U49065 BC107064	-54006	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	-87034	+	TSC_hg19_v1_chr2_+_102759205 X16896	-98222	+	AB012701 NM_016232 AK313967 AK303389	70537	+	BC012580 BC030975 NM_003856 AK291578 AB029084	96277	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	121654	+	AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##X16896|IL1R1|3554|interleukin 1 receptor, type I##AB012701|IL1RL1|9173|interleukin 1 receptor-like 1##NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1##AK313967|IL18R1|8809|interleukin 18 receptor 1##AK303389|IL1RL1|9173|interleukin 1 receptor-like 1##BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1	0.998517	CTCF.p2:13:0.999
chr11	120173857	120173984	reg1002533.p1	14.404	+	AK291993 NM_014352 AF162278 BC101649 BC143593 BC143594 BC143595 AF133895 AJ012214 EU446698	-62943	+	AK302212 NM_001244682	-66572	+	TSC_hg19_v1_chr11_+_120081739 BC047726 NM_178507 BC008339	-92207	+	AK128040 NM_001198670 NM_001198671 NM_001198672 NM_001198673 NM_001198674 NM_001198675 NM_174926	21917	+	AK096207 AK304086 TSC_hg19_v1_chr11_+_120196007 AK289680 AK294713 BC015232	22098	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	33184	+	AK291993|POU2F3|25833|POU class 2 homeobox 3##NM_014352|POU2F3|25833|POU class 2 homeobox 3##AF162278|POU2F3|25833|POU class 2 homeobox 3##BC101649|POU2F3|25833|POU class 2 homeobox 3##BC143593|POU2F3|25833|POU class 2 homeobox 3##BC143594|POU2F3|25833|POU class 2 homeobox 3##BC143595|POU2F3|25833|POU class 2 homeobox 3##AF133895|POU2F3|25833|POU class 2 homeobox 3##AJ012214|POU2F3|25833|POU class 2 homeobox 3##EU446698|POU2F3|25833|POU class 2 homeobox 3##AK302212|POU2F3|25833|POU class 2 homeobox 3##NM_001244682|POU2F3|25833|POU class 2 homeobox 3##BC047726|OAF|220323|OAF homolog (Drosophila)##NM_178507|OAF|220323|OAF homolog (Drosophila)##BC008339|OAF|220323|OAF homolog (Drosophila)##AK128040|TMEM136|219902|transmembrane protein 136##NM_001198670|TMEM136|219902|transmembrane protein 136##NM_001198671|TMEM136|219902|transmembrane protein 136##NM_001198672|TMEM136|219902|transmembrane protein 136##NM_001198673|TMEM136|219902|transmembrane protein 136##NM_001198674|TMEM136|219902|transmembrane protein 136##NM_001198675|TMEM136|219902|transmembrane protein 136##NM_174926|TMEM136|219902|transmembrane protein 136##AK096207|TMEM136|219902|transmembrane protein 136##AK304086|TMEM136|219902|transmembrane protein 136##AK289680|TMEM136|219902|transmembrane protein 136##AK294713|TMEM136|219902|transmembrane protein 136##BC015232|TMEM136|219902|transmembrane protein 136##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12	1.229294	CTCF.p2:-2:0.922	CTCF.p2:46:0.288
chr4	112563365	112563494	reg1003135.p1	14.404	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1000151	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1005260	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-1019154	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	503185	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	589655	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	643572	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	1.787704	CTCF.p2:-25:0.792	CTCF.p2:58:0.995
chr4	83995296	83995429	reg1004413.p1	14.403	+	NM_016129 AK001148 TSC_hg19_v1_chr4_+_83956368 AK024005 BC093007 AK223178 BC004302 BC009292 AB587420 AF100757 AK001210	-39038	+	TSC_hg19_v1_chr4_-_83934095 AK292769 NM_001115007	-61334	-	AB111889 BX640657 TSC_hg19_v1_chr4_-_83931982 BX640966 NM_001115008 NM_194282	-63368	-	BC012205 NM_001130716	35641	-	AF208846 EU570985 EU570986 TSC_hg19_v1_chr4_-_84035890 AJ422147	40529	-	TSC_hg19_v1_chr4_-_84035912 AK000140 NM_001130715 NM_016619	40565	-	NM_016129|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK001148|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK024005|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC093007|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK223178|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC004302|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC009292|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AF100757|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK001210|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK292769|LIN54|132660|lin-54 homolog (C. elegans)##NM_001115007|LIN54|132660|lin-54 homolog (C. elegans)##AB111889|LIN54|132660|lin-54 homolog (C. elegans)##BX640657|LIN54|132660|lin-54 homolog (C. elegans)##BX640966|LIN54|132660|lin-54 homolog (C. elegans)##NM_001115008|LIN54|132660|lin-54 homolog (C. elegans)##NM_194282|LIN54|132660|lin-54 homolog (C. elegans)##BC012205|PLAC8|51316|placenta-specific 8##NM_001130716|PLAC8|51316|placenta-specific 8##AF208846|PLAC8|51316|placenta-specific 8##EU570985|PLAC8|51316|placenta-specific 8##EU570986|PLAC8|51316|placenta-specific 8##AJ422147|PLAC8|51316|placenta-specific 8##AK000140|PLAC8|51316|placenta-specific 8##NM_001130715|PLAC8|51316|placenta-specific 8##NM_016619|PLAC8|51316|placenta-specific 8	0.996656	CTCF.p2:-12:0.997
chr19	247195	247375	reg1002231.p2	14.402	+	AY972818 AY972819 BC136848 BC136867 BC136907 BC136908 NM_001005240	-136634	+	TSC_hg19_v1_chr19_-_70955 AK308635	-176326	-	None	None	None	NM_177543	43883	-	BT007021 CU678210 AF035959 AF047760 AF056083 BC002806 TSC_hg19_v1_chr19_-_291402 NM_003712 NM_177526	44099	-	TSC_hg19_v1_chr19_-_344795 BC028203 NM_017550	97502	-	AY972818|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AY972819|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136848|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136867|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136907|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136908|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##NM_001005240|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AK308635|WASH5P|375690|WAS protein family homolog 5 pseudogene##NM_177543|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BT007021|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF035959|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF047760|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF056083|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BC002806|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_003712|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_177526|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BC028203|MIER2|54531|mesoderm induction early response 1, family member 2##NM_017550|MIER2|54531|mesoderm induction early response 1, family member 2	2.521154	CTCF.p2:-13:0.556	CTCF.p2:47:0.990	CTCF.p2:-73:0.975	CTCF.p2:108:0.632
chr4	7803956	7804098	reg1003811.p1	14.402	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	-367371	-	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-609632	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-734226	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	137361	-	TSC_hg19_v1_chr4_-_8073714 AK094798	269689	-	TSC_hg19_v1_chr4_-_8129388 AK301060	325358	-	BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2	0.978955	CTCF.p2:18:0.979
chr19	17371795	17371906	reg1002386.p2	14.401	+	AB307712 AB463945 AK298764 HQ692851 TSC_hg19_v1_chr19_-_17356214 BC063018 BC084544 BC002669 NM_005234 AK314961	-15710	-	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	-34816	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	-45645	+	AB026290 AB040046 AK300617 AK096028 BC027910 NM_031941 AK315239 AK292031	3697	-	TSC_hg19_v1_chr19_+_17378251 AK308590 AK299493 NM_001033549 NM_014173 AF161491 AK025970 AK301193 BC006244 AL136692 AK225047	6355	+	TSC_hg19_v1_chr19_+_17378266 AK000578 BC091491 BC000788	6444	+	AB307712|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AK298764|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##HQ692851|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC063018|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC084544|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC002669|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##NM_005234|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AK314961|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1##AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1##AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1##AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1##BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1##NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1##AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1##AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1##AK308590|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK299493|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_001033549|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_014173|BABAM1|29086|BRISC and BRCA1 A complex member 1##AF161491|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK025970|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK301193|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC006244|BABAM1|29086|BRISC and BRCA1 A complex member 1##AL136692|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK225047|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK000578|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC091491|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC000788|BABAM1|29086|BRISC and BRCA1 A complex member 1	0.99664	CTCF.p2:0:0.997
chr9	74654010	74654118	reg1002656.p1	14.401	+	TSC_hg19_v1_chr9_+_74526557 AK311206 BC028019 BC052375 AK307186 CU690912	-127476	+	TSC_hg19_v1_chr9_+_74526393 NM_182505 BC010179	-127663	+	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	-127908	-	BC044620 BC053956 BC036255 NM_001128618	21445	-	AK300418 NM_001242507	75446	+	NM_001242505 NM_001242506 NM_004293 TSC_hg19_v1_chr9_+_74764283 BC053584	110215	+	AK311206|C9orf85|138241|chromosome 9 open reading frame 85##BC028019|C9orf85|138241|chromosome 9 open reading frame 85##BC052375|C9orf85|138241|chromosome 9 open reading frame 85##AK307186|C9orf85|138241|chromosome 9 open reading frame 85##NM_182505|C9orf85|138241|chromosome 9 open reading frame 85##BC010179|C9orf85|138241|chromosome 9 open reading frame 85##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1##BC044620|C9orf57|138240|chromosome 9 open reading frame 57##BC053956|C9orf57|138240|chromosome 9 open reading frame 57##BC036255|C9orf57|138240|chromosome 9 open reading frame 57##NM_001128618|C9orf57|138240|chromosome 9 open reading frame 57##AK300418|GDA|9615|guanine deaminase##NM_001242507|GDA|9615|guanine deaminase##NM_001242505|GDA|9615|guanine deaminase##NM_001242506|GDA|9615|guanine deaminase##NM_004293|GDA|9615|guanine deaminase##BC053584|GDA|9615|guanine deaminase	0.999861	CTCF.p2:-6:1.000
chr2	220360223	220360364	reg1003285.p1	14.400	+	NM_001173476	-34760	+	AY603755 TSC_hg19_v1_chr2_+_220309394	-50910	+	AK289531 TSC_hg19_v1_chr2_+_220306806	-53504	+	TSC_hg19_v1_chr2_+_220363622 NM_013335 AK000999 NM_205847 AK290671 AK022578 AK222951 AK296193 BC007456	3488	+	BC031812 NM_018674 NM_182847 AK308804 BC010439 DQ892104 CU679713 AK309373	18715	+	AK302124 NM_001195731	47525	-	NM_001173476|SPEG|10290|SPEG complex locus##AY603755|SPEG|10290|SPEG complex locus##AK289531|SPEG|10290|SPEG complex locus##NM_013335|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK000999|GMPPA|29926|GDP-mannose pyrophosphorylase A##NM_205847|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK290671|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK022578|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK222951|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK296193|GMPPA|29926|GDP-mannose pyrophosphorylase A##BC007456|GMPPA|29926|GDP-mannose pyrophosphorylase A##BC031812|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_018674|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_182847|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK308804|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##BC010439|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##DQ892104|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK309373|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK302124|CHPF|79586|chondroitin polymerizing factor##NM_001195731|CHPF|79586|chondroitin polymerizing factor	0.992952	CTCF.p2:-15:0.993
chrX	47691332	47691441	reg1003440.p1	14.399	+	TSC_hg19_v1_chrX_-_47518553 AF083241 AK312072 AF092737 NM_004182 NM_153477	-172822	-	TSC_hg19_v1_chrX_-_47518534 AF083242 AK223320	-172875	-	TSC_hg19_v1_chrX_-_47510001 NM_001114123 NM_005229	-181378	-	TSC_hg19_v1_chrX_+_47696313 AK126949 NM_007137	4911	+	TSC_hg19_v1_chrX_+_47696322 BC039609	4957	+	TSC_hg19_v1_chrX_-_47863389 BC114216 AK299325 AK122874 NM_001007088 NM_006962 NM_001178099	171967	-	AF083241|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AK312072|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AF092737|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##NM_004182|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##NM_153477|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AF083242|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AK223320|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##NM_001114123|ELK1|2002|ELK1, member of ETS oncogene family##NM_005229|ELK1|2002|ELK1, member of ETS oncogene family##AK126949|ZNF81|347344|zinc finger protein 81##NM_007137|ZNF81|347344|zinc finger protein 81##BC039609|ZNF81|347344|zinc finger protein 81##BC114216|ZNF182|7569|zinc finger protein 182##AK299325|ZNF182|7569|zinc finger protein 182##AK122874|ZNF182|7569|zinc finger protein 182##NM_001007088|ZNF182|7569|zinc finger protein 182##NM_006962|ZNF182|7569|zinc finger protein 182##NM_001178099|ZNF182|7569|zinc finger protein 182	0.750152	CTCF.p2:0:0.750
chr3	17274957	17275089	reg1002322.p2	14.397	+	BC036392 NM_015184	-300442	+	AB029015 NM_001144382	-348572	+	U65918 U66726 U66078 BC027595 NM_001351	-628057	-	AK310539 NM_001134381	466488	-	D86965 NM_014744	507375	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	509144	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.077063	
chr10	97190255	97190396	reg1004179.p1	14.394	+	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	-139543	-	AK126134 NM_207321	-236369	+	M21942 M21941 DQ891400 DQ894579 M17397 M17398 AK303813 Y00498 AK292753 AK293327 AK293328 AK298401 AK315823 BC020596 NM_000770 NM_001198853 NM_001198854 NM_001198855	-361162	-	AM393082 NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_006434	10590	-	TSC_hg19_v1_chr10_-_97321129 AB037717 BC152463 AK022468 AK300407 AK304753 AL117472 AM260536 NM_015385 NM_024991	130814	-	TSC_hg19_v1_chr10_-_97416472 U68758 U76542 BC106054 AK225455 AK225465 AK226032 AK295487 X94453 AK299557 AK312271 BC117240 BC117242 BC143930	226112	-	AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1##AK126134|C10orf129|142827|chromosome 10 open reading frame 129##NM_207321|C10orf129|142827|chromosome 10 open reading frame 129##M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AM393082|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1##NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1##AB037717|SORBS1|10580|sorbin and SH3 domain containing 1##BC152463|SORBS1|10580|sorbin and SH3 domain containing 1##AK022468|SORBS1|10580|sorbin and SH3 domain containing 1##AK300407|SORBS1|10580|sorbin and SH3 domain containing 1##AK304753|SORBS1|10580|sorbin and SH3 domain containing 1##AL117472|SORBS1|10580|sorbin and SH3 domain containing 1##AM260536|SORBS1|10580|sorbin and SH3 domain containing 1##NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1##NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1##U68758|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##U76542|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC106054|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK225455|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK225465|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK226032|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK295487|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##X94453|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK299557|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK312271|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC117240|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC117242|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC143930|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1	0.986041	CTCF.p2:-6:0.986
chr1	241790912	241791053	reg1004380.p1	14.394	+	NM_003679 AK310937 BC005297 AK291558 AF056032 Y13153 CU675097	-95395	+	AK312415 TSC_hg19_v1_chr1_-_241683076 NM_000143	-107902	-	TSC_hg19_v1_chr1_-_241683023 BT009839 AB590519 EU176358 BC017444 BC003108 U48857 U59309	-107950	-	BC117360 NM_001821 X64728	8184	-	TSC_hg19_v1_chr1_-_241803669 BC051900 AF140242 BC073872 BC062622 AF303588 BC036773 BC026242 NM_014322	12493	-	AK122927 NM_144625	24597	+	NM_003679|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AK310937|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##BC005297|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AK291558|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AF056032|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##Y13153|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AK312415|FH|2271|fumarate hydratase##NM_000143|FH|2271|fumarate hydratase##BT009839|FH|2271|fumarate hydratase##EU176358|FH|2271|fumarate hydratase##BC017444|FH|2271|fumarate hydratase##BC003108|FH|2271|fumarate hydratase##U48857|FH|2271|fumarate hydratase##U59309|FH|2271|fumarate hydratase##BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)##NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)##X64728|CHML|1122|choroideremia-like (Rab escort protein 2)##BC051900|OPN3|23596|opsin 3##AF140242|OPN3|23596|opsin 3##BC073872|OPN3|23596|opsin 3##BC062622|OPN3|23596|opsin 3##AF303588|OPN3|23596|opsin 3##BC036773|OPN3|23596|opsin 3##NM_014322|OPN3|23596|opsin 3##AK122927|WDR64|128025|WD repeat domain 64##NM_144625|WDR64|128025|WD repeat domain 64	0.97683	CTCF.p2:2:0.977
chr15	31942662	31942799	reg1003924.p1	14.394	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-323392	+	NM_001243538	-419681	-	GQ502181 HM135791 NM_001252020	-489302	-	AJ430383 NM_130901	4811	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	220099	-	TSC_hg19_v1_chr15_-_32162898 AK126002	220213	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.997441	CTCF.p2:-9:0.997
chr1	9065297	9065422	reg1002941.p1	14.394	+	NM_001215 AK300652 BC034350 M57892 AB102863 AB103091	-59426	+	AK309177 NM_001428	-126209	-	TSC_hg19_v1_chr1_-_8938746 AK223192 BX537400 AK309291 AK315417	-126597	-	AB527336 AY571960 NM_207420	21044	-	TSC_hg19_v1_chr1_-_9117554 AF451839 AF479408	52219	-	TSC_hg19_v1_chr1_-_9129605 DQ892291 DQ895491 CU674838 AK300091	64240	-	NM_001215|CA6|765|carbonic anhydrase VI##AK300652|CA6|765|carbonic anhydrase VI##BC034350|CA6|765|carbonic anhydrase VI##M57892|CA6|765|carbonic anhydrase VI##AB102863|CA6|765|carbonic anhydrase VI##AB103091|CA6|765|carbonic anhydrase VI##AK309177|ENO1|2023|enolase 1, (alpha)##NM_001428|ENO1|2023|enolase 1, (alpha)##AK223192|ENO1|2023|enolase 1, (alpha)##BX537400|ENO1|2023|enolase 1, (alpha)##AK309291|ENO1|2023|enolase 1, (alpha)##AK315417|ENO1|2023|enolase 1, (alpha)##AY571960|SLC2A7|155184|solute carrier family 2 (facilitated glucose transporter), member 7##NM_207420|SLC2A7|155184|solute carrier family 2 (facilitated glucose transporter), member 7##AF451839|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AF479408|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892291|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ895491|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK300091|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5	0.102581	
chr19	47343878	47343988	reg1002235.p2	14.393	+	AF105230 TSC_hg19_v1_chr19_-_47291850 AB209738 AF105423 NM_005628 U53347 AK292690	-52211	-	AF334818 GQ919058 AB527629 CU674018 DQ892148 DQ895345 AF102826 TSC_hg19_v1_chr19_-_47291260 BC000062 AK125222	-52660	-	AK293433 AK301661 NM_001145144	-53391	-	BC006337 TSC_hg19_v1_chr19_-_47354069 AK312003 NM_004069 NM_021575	10198	-	AB051509 AF159851 BC131565 BC150257 NM_004491	77999	+	TSC_hg19_v1_chr19_+_47523068 BC039016	179143	+	AF105230|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AB209738|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF105423|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_005628|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##U53347|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK292690|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF334818|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##GQ919058|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ892148|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ895345|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF102826|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC000062|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK125222|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK293433|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK301661|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145144|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC006337|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##AK312003|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##NM_004069|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##NM_021575|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##AB051509|ARHGAP35|2909|Rho GTPase activating protein 35##AF159851|ARHGAP35|2909|Rho GTPase activating protein 35##BC131565|ARHGAP35|2909|Rho GTPase activating protein 35##BC150257|ARHGAP35|2909|Rho GTPase activating protein 35##NM_004491|ARHGAP35|2909|Rho GTPase activating protein 35##BC039016|NPAS1|4861|neuronal PAS domain protein 1	0.958578	CTCF.p2:7:0.959
chr6	149269140	149269260	reg1002822.p2	14.393	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-200991	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-605009	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-605210	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	369903	+	AK315038 NM_015093 AK307650	370241	+	AY340238 NM_001002255 BC130305 HQ258040	452308	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.96184	CTCF.p2:1:0.962
chr19	10683139	10683267	reg1004261.p1	14.392	+	TSC_hg19_v1_chr19_-_10679653 NM_001800 BC001822 NM_079421	-3565	-	CR542158 CU674892 U20498 DQ892872 DQ892951 DQ896120 AB464505 U49399 U40343 TSC_hg19_v1_chr19_-_10679530	-3774	-	TSC_hg19_v1_chr19_-_10676697 AK093879 AX748348 NM_023008 AK300850	-6506	-	CU678450 CU678534 CU678860 BC003612 BC003387 AF020797 AK222946 AK315689 AK023863 BC005021 NM_005498	14745	-	TSC_hg19_v1_chr19_+_10713140 NM_001145056 AK309801 AK027519	29930	+	TSC_hg19_v1_chr19_+_10736228 FN668568 NM_020428 AK314582 BC040556 BC042692	53016	+	NM_001800|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##BC001822|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##NM_079421|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##CR542158|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U20498|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892872|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892951|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ896120|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U49399|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U40343|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##AK093879|KRI1|65095|KRI1 homolog (S. cerevisiae)##NM_023008|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK300850|KRI1|65095|KRI1 homolog (S. cerevisiae)##BC003612|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##BC003387|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AF020797|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK222946|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK315689|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK023863|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##BC005021|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##NM_005498|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##NM_001145056|SLC44A2|57153|solute carrier family 44, member 2##AK309801|SLC44A2|57153|solute carrier family 44, member 2##AK027519|SLC44A2|57153|solute carrier family 44, member 2##FN668568|SLC44A2|57153|solute carrier family 44, member 2##NM_020428|SLC44A2|57153|solute carrier family 44, member 2##AK314582|SLC44A2|57153|solute carrier family 44, member 2##BC040556|SLC44A2|57153|solute carrier family 44, member 2##BC042692|SLC44A2|57153|solute carrier family 44, member 2	0.70484	CTCF.p2:-13:0.705
chr17	80111864	80111970	reg1002289.p1	14.391	+	TSC_hg19_v1_chr17_-_80056105 BC063242 NM_004104	-55813	-	TSC_hg19_v1_chr17_-_80056081 AB209988 U29344	-55850	-	TSC_hg19_v1_chr17_-_80054282 AY451392 U26644 AB384663	-57645	-	TSC_hg19_v1_chr17_-_80170705 BC040264 BC110997 NM_198082	58818	-	NM_001042422 NM_001206950 TSC_hg19_v1_chr17_+_80186285	74432	+	NM_004207 TSC_hg19_v1_chr17_+_80186920 AK127090 AK223040 U81800	74999	+	BC063242|FASN|2194|fatty acid synthase##NM_004104|FASN|2194|fatty acid synthase##AB209988|FASN|2194|fatty acid synthase##U29344|FASN|2194|fatty acid synthase##AY451392|FASN|2194|fatty acid synthase##U26644|FASN|2194|fatty acid synthase##BC040264|CCDC57|284001|coiled-coil domain containing 57##BC110997|CCDC57|284001|coiled-coil domain containing 57##NM_198082|CCDC57|284001|coiled-coil domain containing 57##NM_001042422|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_001206950|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_004207|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##AK223040|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##U81800|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)	0.924403	CTCF.p2:17:0.924
chr10	26624142	26624263	reg1001914.p1	14.389	+	M74826 BC029517 M81882 TSC_hg19_v1_chr10_+_26505702 BC126327 BC126329 AB527954 HQ258311	-118537	+	NM_000818 NM_001134366	-118967	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	-401022	+	TSC_hg19_v1_chr10_+_26727269 NM_019043	103069	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	103115	+	TSC_hg19_v1_chr10_+_26727679 BC054516	103466	+	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##HQ258311|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA##NM_019043|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	0.430402	CTCF.p2:-13:0.430
chr3	160638943	160639064	reg1003020.p1	14.387	+	AY337264 NM_139245	-165008	+	TSC_hg19_v1_chr3_+_160473386 BC110801	-165663	+	AK026248 NM_025047 BC034354	-244048	+	AB050856 NM_033169 TSC_hg19_v1_chr3_-_160823138 AY359049 BC047618 AK223439 BC028571 AF154848 AK022491 AK095917 NM_001038628 NM_003781 NM_033167 NM_033168	183934	-	AK225664 TSC_hg19_v1_chr3_+_160939097	300093	+	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	300118	+	AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##BC110801|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AK026248|ARL14|80117|ADP-ribosylation factor-like 14##NM_025047|ARL14|80117|ADP-ribosylation factor-like 14##BC034354|ARL14|80117|ADP-ribosylation factor-like 14##AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK225664|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)	0.0	
chr3	48586288	48586417	reg1002632.p2	14.387	+	AK124652 TSC_hg19_v1_chr3_-_48541588 AB527510 AK075441 AF520698 NM_016479	-44778	-	TSC_hg19_v1_chr3_-_48514495 AB097007 BC020279 AL117413 AK310083 AL832568 AF151051 BC001463 AK027728 AK298799	-71821	-	TSC_hg19_v1_chr3_+_48507641 AK315196 BC023630	-78706	+	DQ891635 DQ894825 BC010269 NM_004567 AF108765 D49818 TSC_hg19_v1_chr3_-_48594237 AK299097 AK312623 AY707863 AY714243 AY756062 AY756063 AY756064	7913	-	TSC_hg19_v1_chr3_-_48598563 AK298732	12205	-	BC002647 BC022096 NM_033199 TSC_hg19_v1_chr3_-_48601218	14858	-	AK124652|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK075441|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF520698|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##NM_016479|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AB097007|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC020279|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL117413|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL832568|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF151051|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC001463|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK298799|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK315196|TREX1|11277|three prime repair exonuclease 1##BC023630|TREX1|11277|three prime repair exonuclease 1##DQ891635|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##DQ894825|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##BC010269|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##NM_004567|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AF108765|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##D49818|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK299097|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK312623|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY707863|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY714243|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756062|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756063|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756064|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK298732|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##BC002647|UCN2|90226|urocortin 2##BC022096|UCN2|90226|urocortin 2##NM_033199|UCN2|90226|urocortin 2	0.999779	CTCF.p2:0:1.000
chr12	50360878	50361020	reg1002723.p1	14.386	+	NM_001651	-5671	+	AK225940 NM_000486 BC042496 S73196 S73197 CR542024	-16381	+	CU674012 AB463040 TSC_hg19_v1_chr12_-_50297671 AB023167 BC000051 AK290031 AF190461 NM_012306	-63282	-	NM_001652 U48408	5670	+	BC024144 AB030251 TSC_hg19_v1_chr12_-_50419242 AK000733 AL136794 BC032754 AK315785 NM_001126103 NM_001126104 NM_013277	58284	-	NM_001095 NM_020039 U78180 U78181 BC028722 AK290010	90612	+	NM_001651|AQP5|362|aquaporin 5##AK225940|AQP2|359|aquaporin 2 (collecting duct)##NM_000486|AQP2|359|aquaporin 2 (collecting duct)##BC042496|AQP2|359|aquaporin 2 (collecting duct)##S73196|AQP2|359|aquaporin 2 (collecting duct)##S73197|AQP2|359|aquaporin 2 (collecting duct)##CR542024|AQP2|359|aquaporin 2 (collecting duct)##AB023167|FAIM2|23017|Fas apoptotic inhibitory molecule 2##BC000051|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AK290031|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AF190461|FAIM2|23017|Fas apoptotic inhibitory molecule 2##NM_012306|FAIM2|23017|Fas apoptotic inhibitory molecule 2##NM_001652|AQP6|363|aquaporin 6, kidney specific##U48408|AQP6|363|aquaporin 6, kidney specific##BC024144|RACGAP1|29127|Rac GTPase activating protein 1##AB030251|RACGAP1|29127|Rac GTPase activating protein 1##AK000733|RACGAP1|29127|Rac GTPase activating protein 1##AL136794|RACGAP1|29127|Rac GTPase activating protein 1##BC032754|RACGAP1|29127|Rac GTPase activating protein 1##AK315785|RACGAP1|29127|Rac GTPase activating protein 1##NM_001126103|RACGAP1|29127|Rac GTPase activating protein 1##NM_001126104|RACGAP1|29127|Rac GTPase activating protein 1##NM_013277|RACGAP1|29127|Rac GTPase activating protein 1##NM_001095|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##NM_020039|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78180|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78181|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##BC028722|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##AK290010|ACCN2|41|amiloride-sensitive cation channel 2, neuronal	1.152895	CTCF.p2:-15:0.999
chr10	23277912	23278033	reg1002725.p1	14.385	+	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	-60991	+	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	-274482	-	AK294817 TSC_hg19_v1_chr10_-_23003038	-274935	-	BC117471 BC130380 NM_012228 BC018030 TSC_hg19_v1_chr10_+_23384507 AF151889 BC066305 AF122004 EU446941	106511	+	AB463998 NM_178161	203486	+	BC035732 NM_153714	355799	-	NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC117471|MSRB2|22921|methionine sulfoxide reductase B2##BC130380|MSRB2|22921|methionine sulfoxide reductase B2##NM_012228|MSRB2|22921|methionine sulfoxide reductase B2##BC018030|MSRB2|22921|methionine sulfoxide reductase B2##AF151889|MSRB2|22921|methionine sulfoxide reductase B2##BC066305|MSRB2|22921|methionine sulfoxide reductase B2##AF122004|MSRB2|22921|methionine sulfoxide reductase B2##EU446941|MSRB2|22921|methionine sulfoxide reductase B2##NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67	0.995552	CTCF.p2:20:0.996
chr3	197237108	197237259	reg1004317.p1	14.385	+	BC140841 BC144651 TSC_hg19_v1_chr3_-_197025506 AK304280 NM_001098424 NM_001204386 NM_004087 U13896 U13897 AK310596	-211709	-	TSC_hg19_v1_chr3_-_197024987 BC015560 BC028486 AK310893	-212250	-	AK294855 NM_001204387 NM_001204388	-326182	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	45659	-	NM_203315 TSC_hg19_v1_chr3_-_197300209	63018	-	TSC_hg19_v1_chr3_-_197354756 BC067856 AK309924 BC094848 AK299863 BC080518 AK311713	117570	-	BC140841|DLG1|1739|discs, large homolog 1 (Drosophila)##BC144651|DLG1|1739|discs, large homolog 1 (Drosophila)##AK304280|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001098424|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204386|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_004087|DLG1|1739|discs, large homolog 1 (Drosophila)##U13896|DLG1|1739|discs, large homolog 1 (Drosophila)##U13897|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310596|DLG1|1739|discs, large homolog 1 (Drosophila)##BC015560|DLG1|1739|discs, large homolog 1 (Drosophila)##BC028486|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310893|DLG1|1739|discs, large homolog 1 (Drosophila)##AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203315|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC067856|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK309924|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC094848|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK299863|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC080518|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK311713|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene	1.229488	CTCF.p2:10:0.991	CTCF.p2:99:0.239
chr5	74977208	74977325	reg1003110.p2	14.384	+	NM_001130105	-169461	-	AF163570 NM_016218 TSC_hg19_v1_chr5_+_74807715 AK091659 AK314610 AK026316 AF194973 AF315601 AF318313	-169530	+	TSC_hg19_v1_chr5_-_74807448 AK091851 AK292087 AX747221 NM_005713 NM_031361	-169797	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	30996	-	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	35994	-	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	402005	+	NM_001130105|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AF163570|POLK|51426|polymerase (DNA directed) kappa##NM_016218|POLK|51426|polymerase (DNA directed) kappa##AK091659|POLK|51426|polymerase (DNA directed) kappa##AK314610|POLK|51426|polymerase (DNA directed) kappa##AK026316|POLK|51426|polymerase (DNA directed) kappa##AF194973|POLK|51426|polymerase (DNA directed) kappa##AF318313|POLK|51426|polymerase (DNA directed) kappa##AK091851|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AK292087|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##NM_005713|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##NM_031361|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C	0.369768	CTCF.p2:7:0.370
chr8	53408847	53408964	reg1002697.p1	14.384	+	BC026316 AB011107 AK311188 BC031075 NM_014682 BC025662	-86585	-	AK299452 TSC_hg19_v1_chr8_+_52812239	-596682	+	TSC_hg19_v1_chr8_-_52811724 NM_052937	-597178	-	BC130641 BC130643 BC144534 AY358213 NM_207413	69088	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	218081	-	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	218108	-	AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC130641|FAM150A|389658|family with sequence similarity 150, member A##BC130643|FAM150A|389658|family with sequence similarity 150, member A##BC144534|FAM150A|389658|family with sequence similarity 150, member A##AY358213|FAM150A|389658|family with sequence similarity 150, member A##NM_207413|FAM150A|389658|family with sequence similarity 150, member A##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1	0.962072	CTCF.p2:2:0.962
chr9	77388933	77389058	reg1003979.p1	14.384	+	NM_006914 BC051830 Y08639	-276721	+	TSC_hg19_v1_chr9_+_75766797 BC001275	-1622192	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	-1622217	+	AY333284 NM_001177311	113267	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	113739	-	AF350881 AK057748 NM_017662	114014	-	NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B##BC001275|ANXA1|301|annexin A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##AY333284|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177311|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF350881|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AK057748|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_017662|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	0.9891	CTCF.p2:-2:0.989
chr1	151969413	151969534	reg1003890.p1	14.382	+	NM_002966	-2760	-	BC015973 AK291073 TSC_hg19_v1_chr1_-_151966307 D28387	-3155	-	M81457 TSC_hg19_v1_chr1_-_151966289 BC105786 M38591	-3186	-	D50374 TSC_hg19_v1_chr1_-_152009438	39949	-	TSC_hg19_v1_chr1_-_152009451 AK312184 BC014354	39977	-	X80201 TSC_hg19_v1_chr1_-_152009481 BC001410 D49355	40001	-	NM_002966|S100A10|6281|S100 calcium binding protein A10##BC015973|S100A10|6281|S100 calcium binding protein A10##AK291073|S100A10|6281|S100 calcium binding protein A10##D28387|S100A10|6281|S100 calcium binding protein A10##M81457|S100A10|6281|S100 calcium binding protein A10##BC105786|S100A10|6281|S100 calcium binding protein A10##M38591|S100A10|6281|S100 calcium binding protein A10##D50374|S100A11|6282|S100 calcium binding protein A11##AK312184|S100A11|6282|S100 calcium binding protein A11##BC014354|S100A11|6282|S100 calcium binding protein A11##X80201|S100A11|6282|S100 calcium binding protein A11##BC001410|S100A11|6282|S100 calcium binding protein A11##D49355|S100A11|6282|S100 calcium binding protein A11	0.0	
chr15	82760503	82760632	reg1004096.p1	14.382	+	NM_198181 CR936812	-38351	+	TSC_hg19_v1_chr15_+_82647308 BC066934	-113236	+	NM_001164465	-118862	-	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	64326	-	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	184225	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	184323	+	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like	1.760578	CTCF.p2:-7:0.999	CTCF.p2:-100:0.762
chr7	44605218	44605349	reg1003720.p1	14.382	+	AY437865 AY515256 FJ481111 TSC_hg19_v1_chr7_-_44580901 BC117178 BC143731 BC143756 AF192522 AF192523 NM_001101648 NM_013389	-24398	-	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	-75002	-	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	-239992	-	TSC_hg19_v1_chr7_-_44613508 CR457213 DQ891215 DQ894398 AB385026 AL136700 AK022774 AK309276 BC001235 AK222662 AK315363 AF247666 AJ131712	8248	-	NM_019082	8853	-	TSC_hg19_v1_chr7_-_44621814 AY191223 AB590072 BC025705 AM393201 AM393715 BX647965 BC035467	16517	-	AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3##AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##CR457213|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##DQ891215|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##DQ894398|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AL136700|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK022774|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK309276|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##BC001235|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK222662|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK315363|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AF247666|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AJ131712|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##NM_019082|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AY191223|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BC025705|TMED4|222068|transmembrane emp24 protein transport domain containing 4##AM393201|TMED4|222068|transmembrane emp24 protein transport domain containing 4##AM393715|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BX647965|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BC035467|TMED4|222068|transmembrane emp24 protein transport domain containing 4	0.95108	CTCF.p2:-1:0.951
chr17	47257792	47257940	reg1003749.p1	14.381	+	AF510036 AJ517770 NM_153446 BC113675 BC113677 HQ258321 HQ258467	-47509	+	TSC_hg19_v1_chr17_+_47210130 NM_001159387 AJ517771	-47766	+	AK302876 NM_001159388	-48045	+	BC008663 NM_031498 AK312839 NM_001198755 NM_001198756	28885	-	AB037886 NM_001135186 NM_016428	29722	+	NM_001198754	30069	-	AF510036|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517770|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_153446|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113675|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113677|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258321|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258467|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159387|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517771|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AK302876|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159388|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC008663|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##NM_031498|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AK312839|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##NM_001198755|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##NM_001198756|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AB037886|ABI3|51225|ABI family, member 3##NM_001135186|ABI3|51225|ABI family, member 3##NM_016428|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2	0.996686	CTCF.p2:-24:0.997
chr7	73021439	73021586	reg1004443.p1	14.381	+	TSC_hg19_v1_chr7_-_72993012 NM_012453	-28487	-	TSC_hg19_v1_chr7_-_72992936 BC047354 AL080162	-28550	-	BC006308 TSC_hg19_v1_chr7_-_72992919 AY358518 AK302277	-28588	-	TSC_hg19_v1_chr7_-_73038853 AF245470 AF245471 AF245472 AF245473 AF245474 AB527610 BC012925 AF156603 NM_032951 NM_032952 NM_032953 NM_032954	17358	-	TSC_hg19_v1_chr7_+_73082160 AY081952 BC029730 NM_001077621	60702	+	TSC_hg19_v1_chr7_+_73082320 BC064621	60811	+	NM_012453|TBL2|26608|transducin (beta)-like 2##BC047354|TBL2|26608|transducin (beta)-like 2##AL080162|TBL2|26608|transducin (beta)-like 2##BC006308|TBL2|26608|transducin (beta)-like 2##AY358518|TBL2|26608|transducin (beta)-like 2##AK302277|TBL2|26608|transducin (beta)-like 2##AF245470|MLXIPL|51085|MLX interacting protein-like##AF245471|MLXIPL|51085|MLX interacting protein-like##AF245472|MLXIPL|51085|MLX interacting protein-like##AF245473|MLXIPL|51085|MLX interacting protein-like##AF245474|MLXIPL|51085|MLX interacting protein-like##BC012925|MLXIPL|51085|MLX interacting protein-like##AF156603|MLXIPL|51085|MLX interacting protein-like##NM_032951|MLXIPL|51085|MLX interacting protein-like##NM_032952|MLXIPL|51085|MLX interacting protein-like##NM_032953|MLXIPL|51085|MLX interacting protein-like##NM_032954|MLXIPL|51085|MLX interacting protein-like##AY081952|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##BC029730|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##NM_001077621|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##BC064621|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)	0.74492	CTCF.p2:-1:0.745
chr4	9661447	9661587	reg1004487.p1	14.380	+	AF529414 NM_001040448	-215258	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-296664	+	AF544012 BC100991 NM_001105662	-301409	+	NM_000798	121740	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	361607	-	AK310895 BC018897 NM_001001290 AK096819	380405	-	AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF544012|USP17|391627|ubiquitin specific peptidase 17##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_000798|DRD5|1816|dopamine receptor D5##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.995288	CTCF.p2:11:0.995
chr17	17794466	17794595	reg1003576.p1	14.379	+	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	-54206	-	TSC_hg19_v1_chr17_-_17740301 U00968 BC063281	-54235	-	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	-67626	-	TSC_hg19_v1_chr17_-_17875715 AK124331 AK295111 AK301944 AK303305 AK299872 AF467441 BC051650 AK294846 NM_001033551 NM_001082968	81211	-	NM_001130090 NM_001130091 NM_001130092 NM_031294 TSC_hg19_v1_chr17_+_17876186 BC047873 AL136926 AK293011 BC040276 BC050419 BC050665 AK093317 AX748051	81670	+	AM393241 CU678578 CU689282 AB528073 AF070584 BC032126 AF052185 AY203943 TSC_hg19_v1_chr17_-_17942481 BC004114 NM_145691 AK290257 AK294487 AK296382	147873	-	BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1##U00968|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC063281|SREBF1|6720|sterol regulatory element binding transcription factor 1##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK124331|TOM1L2|146691|target of myb1-like 2 (chicken)##AK295111|TOM1L2|146691|target of myb1-like 2 (chicken)##AK301944|TOM1L2|146691|target of myb1-like 2 (chicken)##AK303305|TOM1L2|146691|target of myb1-like 2 (chicken)##AK299872|TOM1L2|146691|target of myb1-like 2 (chicken)##AF467441|TOM1L2|146691|target of myb1-like 2 (chicken)##BC051650|TOM1L2|146691|target of myb1-like 2 (chicken)##AK294846|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001033551|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001082968|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001130090|LRRC48|83450|leucine rich repeat containing 48##NM_001130091|LRRC48|83450|leucine rich repeat containing 48##NM_001130092|LRRC48|83450|leucine rich repeat containing 48##NM_031294|LRRC48|83450|leucine rich repeat containing 48##BC047873|LRRC48|83450|leucine rich repeat containing 48##AL136926|LRRC48|83450|leucine rich repeat containing 48##AK293011|LRRC48|83450|leucine rich repeat containing 48##BC040276|LRRC48|83450|leucine rich repeat containing 48##BC050419|LRRC48|83450|leucine rich repeat containing 48##BC050665|LRRC48|83450|leucine rich repeat containing 48##AK093317|LRRC48|83450|leucine rich repeat containing 48##AM393241|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF070584|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC032126|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF052185|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AY203943|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC004114|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_145691|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK290257|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK294487|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2	0.969756	CTCF.p2:-16:0.970
chr21	43537630	43537768	reg1003722.p1	14.379	+	AB096965 AY771619 AY771620 NM_001004416 NM_173568	-46274	+	AB051810 AB051811 NM_001199527 NM_001199528	-54632	+	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	-107228	-	AF323660 NM_207627 AF323661 NM_207628	82160	+	AF323662 NM_207629	98487	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	101594	+	AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323662|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207629|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	0.993414	CTCF.p2:29:0.993
chr12	57607193	57607320	reg1003923.p1	14.378	+	TSC_hg19_v1_chr12_+_57522452 BC045107	-84793	+	TSC_hg19_v1_chr12_+_57522265 BC052593 BC072015 NM_002332 X13916	-84974	+	TSC_hg19_v1_chr12_-_57505177 NM_001178078 NM_001178080 NM_001178081 NM_003153	-102059	-	AY358614 NM_007224 TSC_hg19_v1_chr12_+_57610601 BC036679 AK094231 AK290949 BC053581 CU690992	3408	+	NM_001166356 NM_005412 TSC_hg19_v1_chr12_+_57623504 AK055053 AK223555 AK298231 AK301339 AK303827 BC032584 BC044211 AK295941 BC008066 BC012833 BC011911 BC091501 CU680112 CU689432 AB527799 BT006866 DQ891309 DQ894430	16202	+	NM_001166358 BX647711 AK301443 TSC_hg19_v1_chr12_+_57623972 BX648847 NM_001166359 NM_001166357 BC004189 BC004215 BC008711 AK296183 AK297173 AK315916	16732	+	BC045107|LRP1|4035|low density lipoprotein receptor-related protein 1##BC052593|LRP1|4035|low density lipoprotein receptor-related protein 1##BC072015|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_002332|LRP1|4035|low density lipoprotein receptor-related protein 1##X13916|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_001178078|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178080|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178081|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_003153|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AY358614|NXPH4|11247|neurexophilin 4##NM_007224|NXPH4|11247|neurexophilin 4##BC036679|NXPH4|11247|neurexophilin 4##AK094231|NXPH4|11247|neurexophilin 4##AK290949|NXPH4|11247|neurexophilin 4##BC053581|NXPH4|11247|neurexophilin 4##NM_001166356|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_005412|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK055053|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK223555|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK298231|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301339|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK303827|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC032584|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC044211|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK295941|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008066|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC011911|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC091501|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BT006866|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ891309|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ894430|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166358|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX647711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301443|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX648847|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166359|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166357|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK296183|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK297173|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK315916|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)	0.984029	CTCF.p2:-12:0.984
chr20	4066011	4066135	reg1003995.p1	14.378	+	AL096778 NM_007219 BC039584 TSC_hg19_v1_chr20_-_3996221 BC000213 BC003141 NM_001134337 NM_001134338 BC032738	-69908	-	NM_153640 BC107724 BC065019	-195584	+	TSC_hg19_v1_chr20_+_3870042 AK310190 AK097796 BC142976 BC009421	-196017	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	63362	+	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	63450	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	163517	-	AL096778|RNF24|11237|ring finger protein 24##NM_007219|RNF24|11237|ring finger protein 24##BC039584|RNF24|11237|ring finger protein 24##BC000213|RNF24|11237|ring finger protein 24##NM_001134337|RNF24|11237|ring finger protein 24##NM_001134338|RNF24|11237|ring finger protein 24##NM_153640|PANK2|80025|pantothenate kinase 2##BC107724|PANK2|80025|pantothenate kinase 2##BC065019|PANK2|80025|pantothenate kinase 2##AK310190|PANK2|80025|pantothenate kinase 2##AK097796|PANK2|80025|pantothenate kinase 2##BC142976|PANK2|80025|pantothenate kinase 2##BC009421|PANK2|80025|pantothenate kinase 2##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor	0.998522	CTCF.p2:1:0.999
chr12	15737506	15737609	reg1002450.p2	14.377	+	TSC_hg19_v1_chr12_+_15699551 AK290982	-37980	+	NM_030668 NM_030669 NM_030670 NM_030671 AF152378 AF187042 AF187043 AF187044	-38276	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	-262006	+	TSC_hg19_v1_chr12_-_15815073 AK316134	77583	-	TSC_hg19_v1_chr12_-_15865848 AK292931	128307	-	TSC_hg19_v1_chr12_-_15942323 U12535 BC005836 AK291777 BC030010	204675	-	AK290982|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK316134|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK292931|EPS8|2059|epidermal growth factor receptor pathway substrate 8##U12535|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC005836|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK291777|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC030010|EPS8|2059|epidermal growth factor receptor pathway substrate 8	0.980983	CTCF.p2:15:0.981
chr16	67701894	67702028	reg1003881.p1	14.377	+	TSC_hg19_v1_chr16_+_67700716 NM_001012984 AK123796 BC032064 BC041612 BC064498 BC082249	-1240	+	TSC_hg19_v1_chr16_-_67700634 BC008284 AL136786 NM_032140	-1346	-	TSC_hg19_v1_chr16_+_67694862 NM_001037281 NM_016948 AB043634 BC015626 AF265565 AB041642 AJ277095 DQ893477 DQ896347 AB528401	-7086	+	TSC_hg19_v1_chr16_-_67753220 AK074382 BC107585 BC000757 AK307280 AK225997 NM_001243650 NM_030819	51268	-	TSC_hg19_v1_chr16_-_67840456 AB384605 AB040897 AK055727 AK298806 AK304030 BC099917 AK295171 AK295530	138443	-	TSC_hg19_v1_chr16_-_67840464 BC121176 BC121177 AY337313 NM_020850	138548	-	NM_001012984|C16orf86|388284|chromosome 16 open reading frame 86##AK123796|C16orf86|388284|chromosome 16 open reading frame 86##BC032064|C16orf86|388284|chromosome 16 open reading frame 86##BC041612|C16orf86|388284|chromosome 16 open reading frame 86##BC064498|C16orf86|388284|chromosome 16 open reading frame 86##BC082249|C16orf86|388284|chromosome 16 open reading frame 86##BC008284|C16orf48|84080|chromosome 16 open reading frame 48##AL136786|C16orf48|84080|chromosome 16 open reading frame 48##NM_032140|C16orf48|84080|chromosome 16 open reading frame 48##NM_001037281|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##NM_016948|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##AB043634|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##BC015626|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##AF265565|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##AB041642|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##AJ277095|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##DQ893477|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##DQ896347|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##AK074382|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##BC107585|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##BC000757|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##AK307280|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##AK225997|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##NM_001243650|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##NM_030819|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##AB040897|RANBP10|57610|RAN binding protein 10##AK055727|RANBP10|57610|RAN binding protein 10##AK298806|RANBP10|57610|RAN binding protein 10##AK304030|RANBP10|57610|RAN binding protein 10##BC099917|RANBP10|57610|RAN binding protein 10##AK295171|RANBP10|57610|RAN binding protein 10##AK295530|RANBP10|57610|RAN binding protein 10##BC121176|RANBP10|57610|RAN binding protein 10##BC121177|RANBP10|57610|RAN binding protein 10##AY337313|RANBP10|57610|RAN binding protein 10##NM_020850|RANBP10|57610|RAN binding protein 10	0.0	
chr3	42289121	42289264	reg1003724.p1	14.377	+	TSC_hg19_v1_chr3_+_42201684 BX647199 NM_014965 BC015922 AK000754 AM392573 AM393596 CU677507 EU446989	-87437	+	AL713787 TSC_hg19_v1_chr3_+_42190865	-98345	+	TSC_hg19_v1_chr3_+_42190749 AK294221	-98444	+	BC008283 NM_001174138	16246	-	BC111026 NM_000729	18469	-	AF326749 BC016747 NM_144634	162851	-	BX647199|TRAK1|22906|trafficking protein, kinesin binding 1##NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1##BC015922|TRAK1|22906|trafficking protein, kinesin binding 1##AK000754|TRAK1|22906|trafficking protein, kinesin binding 1##AM392573|TRAK1|22906|trafficking protein, kinesin binding 1##AM393596|TRAK1|22906|trafficking protein, kinesin binding 1##EU446989|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##BC008283|CCK|885|cholecystokinin##NM_001174138|CCK|885|cholecystokinin##BC111026|CCK|885|cholecystokinin##NM_000729|CCK|885|cholecystokinin##AF326749|LYZL4|131375|lysozyme-like 4##BC016747|LYZL4|131375|lysozyme-like 4##NM_144634|LYZL4|131375|lysozyme-like 4	0.956729	CTCF.p2:-25:0.957
chr21	35975451	35975568	reg1003580.p1	14.375	+	CR542065 AK299444 TSC_hg19_v1_chr21_-_35899121 AK293293 U85267 NM_203418	-76356	-	TSC_hg19_v1_chr21_-_35884509 AK095442 BC046224	-90972	-	AK304336 NM_000219 BC069055	-91857	-	NM_203417 U85265	11235	-	BT007363 CU678256 AF303449 U85266 TSC_hg19_v1_chr21_-_35987486 BC002864 AK092184 AX747397 NM_004414 AY325903	11837	-	AF448438 AF448439 NM_053277	66178	+	CR542065|RCAN1|1827|regulator of calcineurin 1##AK299444|RCAN1|1827|regulator of calcineurin 1##AK293293|RCAN1|1827|regulator of calcineurin 1##U85267|RCAN1|1827|regulator of calcineurin 1##NM_203418|RCAN1|1827|regulator of calcineurin 1##AK095442|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC046224|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK304336|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_000219|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC069055|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_203417|RCAN1|1827|regulator of calcineurin 1##U85265|RCAN1|1827|regulator of calcineurin 1##BT007363|RCAN1|1827|regulator of calcineurin 1##AF303449|RCAN1|1827|regulator of calcineurin 1##U85266|RCAN1|1827|regulator of calcineurin 1##BC002864|RCAN1|1827|regulator of calcineurin 1##AK092184|RCAN1|1827|regulator of calcineurin 1##NM_004414|RCAN1|1827|regulator of calcineurin 1##AY325903|RCAN1|1827|regulator of calcineurin 1##AF448438|CLIC6|54102|chloride intracellular channel 6##AF448439|CLIC6|54102|chloride intracellular channel 6##NM_053277|CLIC6|54102|chloride intracellular channel 6	0.957652	CTCF.p2:13:0.958
chr16	58790434	58790548	reg1003118.p1	14.374	+	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-22294	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-71835	-	TSC_hg19_v1_chr16_-_58663742 BC040523 AL833549 NM_016284 NM_206999	-126746	-	AK124734 NM_001796	3280247	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	6365411	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	6365477	-	DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.988099	CTCF.p2:12:0.988
chr2	192029961	192030094	reg1004457.p1	14.373	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-13720	-	TSC_hg19_v1_chr2_-_192015965 NM_003151	-14068	-	L78440 TSC_hg19_v1_chr2_-_192015772 AK301172	-14258	-	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	80071	+	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	512835	+	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	681711	-	BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##NM_003151|STAT4|6775|signal transducer and activator of transcription 4##L78440|STAT4|6775|signal transducer and activator of transcription 4##AK301172|STAT4|6775|signal transducer and activator of transcription 4##NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response	0.83427	CTCF.p2:-7:0.834
chrX	152773094	152773228	reg1003953.p1	14.373	+	DQ891898 DQ895084 AB463441 AM392603 AM393683 CU678628 BT007323 AK298756 TSC_hg19_v1_chrX_+_152770289	-2975	+	TSC_hg19_v1_chrX_+_152760466 BC002416 BC004244 J04599 AK223302	-12700	+	NM_001711 TSC_hg19_v1_chrX_+_152760437 AK293289 AK293268 AK222484 AK291955 AK297966 AK092954 AX747825 AK093023 AX747863	-12765	+	NM_001001344 NM_021949 U57971 U60414 BC130009	28451	+	BC071851 AB528134 TSC_hg19_v1_chrX_-_152864584 BC001909 BC007232 BC032121	91349	-	TSC_hg19_v1_chrX_-_152864639 NM_001130997 NM_152274	91474	-	DQ891898|BGN|633|biglycan##DQ895084|BGN|633|biglycan##AM392603|BGN|633|biglycan##AM393683|BGN|633|biglycan##BT007323|BGN|633|biglycan##AK298756|BGN|633|biglycan##BC002416|BGN|633|biglycan##BC004244|BGN|633|biglycan##J04599|BGN|633|biglycan##AK223302|BGN|633|biglycan##NM_001711|BGN|633|biglycan##AK293289|BGN|633|biglycan##AK293268|BGN|633|biglycan##AK222484|BGN|633|biglycan##AK291955|BGN|633|biglycan##AK297966|BGN|633|biglycan##AK092954|BGN|633|biglycan##AK093023|BGN|633|biglycan##NM_001001344|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##NM_021949|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##U57971|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##U60414|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##BC130009|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##BC071851|FAM58A|92002|family with sequence similarity 58, member A##BC001909|FAM58A|92002|family with sequence similarity 58, member A##BC007232|FAM58A|92002|family with sequence similarity 58, member A##BC032121|FAM58A|92002|family with sequence similarity 58, member A##NM_001130997|FAM58A|92002|family with sequence similarity 58, member A##NM_152274|FAM58A|92002|family with sequence similarity 58, member A	0.999303	CTCF.p2:13:0.999
chr17	10130299	10130432	reg1001612.p1	14.372	+	TSC_hg19_v1_chr17_-_10101924 AY327406 NM_201433	-28459	-	TSC_hg19_v1_chr17_-_9940004 AK057761 BC006454 NM_201432	-190332	-	TSC_hg19_v1_chr17_-_9939883 AK292987	-190487	-	AF111782 NM_003802	145956	-	AK303395 NM_002472	194901	-	AF111783 NM_017533	242510	-	AY327406|GAS7|8522|growth arrest-specific 7##NM_201433|GAS7|8522|growth arrest-specific 7##AK057761|GAS7|8522|growth arrest-specific 7##BC006454|GAS7|8522|growth arrest-specific 7##NM_201432|GAS7|8522|growth arrest-specific 7##AK292987|GAS7|8522|growth arrest-specific 7##AF111782|MYH13|8735|myosin, heavy chain 13, skeletal muscle##NM_003802|MYH13|8735|myosin, heavy chain 13, skeletal muscle##AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle	0.995602	CTCF.p2:-2:0.996
chr15	89448094	89448218	reg1003765.p1	14.370	+	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	-9358	-	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	-101470	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	-265970	+	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	8404	-	BC003610 AK095908 AK222735 AK223182 AK304627 AK310357 AK312640 U58516 AY141974 TSC_hg19_v1_chr15_-_89456611 NM_001114614 NM_005928	8483	-	NM_007011 NM_152924	183224	+	AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan##BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein##BC003610|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK095908|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK222735|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK223182|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK304627|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK310357|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK312640|MFGE8|4240|milk fat globule-EGF factor 8 protein##U58516|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY141974|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_001114614|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_005928|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_007011|ABHD2|11057|abhydrolase domain containing 2##NM_152924|ABHD2|11057|abhydrolase domain containing 2	0.99818	CTCF.p2:5:0.998
chr17	7816380	7816510	reg1003906.p1	14.369	+	TSC_hg19_v1_chr17_+_7812703 AK096555	-3685	+	TSC_hg19_v1_chr17_+_7792039 AF006515 NM_001005273 NM_005852 U91543	-24344	+	TSC_hg19_v1_chr17_+_7788113 NM_001005271	-28334	+	AF016411 BC096232 BC096233 BC096234 BC099634 NM_004732	16307	-	AB528455 DQ890860 DQ894015 BC025413 TSC_hg19_v1_chr17_-_7835265 BC032717 AK314038 NM_021210 NM_001166621	18815	-	NM_001037144 NM_053051 AY160226 AY160227 TSC_hg19_v1_chr17_+_7835522 AK293076 AF331638 BC021134 AL833907	19084	+	AK096555|CHD3|1107|chromodomain helicase DNA binding protein 3##NM_001005273|CHD3|1107|chromodomain helicase DNA binding protein 3##NM_005852|CHD3|1107|chromodomain helicase DNA binding protein 3##U91543|CHD3|1107|chromodomain helicase DNA binding protein 3##NM_001005271|CHD3|1107|chromodomain helicase DNA binding protein 3##AF016411|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096232|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096233|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096234|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC099634|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_004732|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##DQ890860|TRAPPC1|58485|trafficking protein particle complex 1##DQ894015|TRAPPC1|58485|trafficking protein particle complex 1##BC025413|TRAPPC1|58485|trafficking protein particle complex 1##BC032717|TRAPPC1|58485|trafficking protein particle complex 1##AK314038|TRAPPC1|58485|trafficking protein particle complex 1##NM_021210|TRAPPC1|58485|trafficking protein particle complex 1##NM_001166621|TRAPPC1|58485|trafficking protein particle complex 1##NM_001037144|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##NM_053051|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160226|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160227|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AK293076|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AF331638|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##BC021134|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AL833907|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein	0.368991	CTCF.p2:-9:0.369
chr6	43097678	43097783	reg1002666.p2	14.368	+	TSC_hg19_v1_chr6_+_43044048 NM_002821 NM_152880 NM_152881 NM_152882 U33635 BC071557 BC002377 BC014626 AK292589 AF531868 AF531869 AF531870 AF531871 AF531872 U40271 AB209350 AK291016	-53653	+	NM_201522 AK127894	-69492	+	AK094102 NM_201523 AK055293 BX640717	-70100	+	NM_003131 TSC_hg19_v1_chr6_+_43139027 BC052572 J03161	41323	+	TSC_hg19_v1_chr6_+_43139192 BC048211	41463	+	TSC_hg19_v1_chr6_+_43139204 AB209128 AB464198	41563	+	NM_002821|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152880|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152881|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152882|PTK7|5754|PTK7 protein tyrosine kinase 7##U33635|PTK7|5754|PTK7 protein tyrosine kinase 7##BC071557|PTK7|5754|PTK7 protein tyrosine kinase 7##BC002377|PTK7|5754|PTK7 protein tyrosine kinase 7##BC014626|PTK7|5754|PTK7 protein tyrosine kinase 7##AK292589|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531868|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531869|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531870|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531871|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531872|PTK7|5754|PTK7 protein tyrosine kinase 7##U40271|PTK7|5754|PTK7 protein tyrosine kinase 7##AB209350|PTK7|5754|PTK7 protein tyrosine kinase 7##AK291016|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_201522|KLC4|89953|kinesin light chain 4##AK127894|KLC4|89953|kinesin light chain 4##AK094102|KLC4|89953|kinesin light chain 4##NM_201523|KLC4|89953|kinesin light chain 4##AK055293|KLC4|89953|kinesin light chain 4##BX640717|KLC4|89953|kinesin light chain 4##NM_003131|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC052572|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##J03161|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC048211|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##AB209128|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)	0.948498	CTCF.p2:5:0.948
chr9	70859582	70859713	reg1003821.p1	14.368	+	NM_201453 AK293173 AY344633 AK297912 BC069006 BC082271 AF265442 CU688346	-2755	+	TSC_hg19_v1_chr9_-_70490188 NM_001024916 NM_201453	-369471	-	BC141856 TSC_hg19_v1_chr9_-_70490153 BC067803 AK292585	-369497	-	AY344641 AY344642 NM_199135 BC137365 BC137366 EU446685 BC103887	58177	+	BC033073 NM_021965	112167	+	DQ890797 DQ893952 BC029780 NM_153237 TSC_hg19_v1_chr9_-_71155800	296118	-	NM_201453|CBWD3|445571|COBW domain containing 3##AK293173|CBWD6|644019|COBW domain containing 6##AY344633|CBWD3|445571|COBW domain containing 3##AK297912|CBWD3|445571|COBW domain containing 3##BC069006|CBWD6|644019|COBW domain containing 6##BC082271|CBWD5|220869|COBW domain containing 5##AF265442|CBWD5|220869|COBW domain containing 5##NM_001024916|CBWD5|220869|COBW domain containing 5##NM_201453|CBWD3|445571|COBW domain containing 3##BC141856|CBWD5|220869|COBW domain containing 5##BC067803|CBWD5|220869|COBW domain containing 5##AK292585|CBWD5|220869|COBW domain containing 5##AY344641|FOXD4L3|286380|forkhead box D4-like 3##AY344642|FOXD4L3|286380|forkhead box D4-like 3##NM_199135|FOXD4L3|286380|forkhead box D4-like 3##BC137365|FOXD4L6|653404|forkhead box D4-like 6##BC137366|FOXD4L6|653404|forkhead box D4-like 6##EU446685|FOXD4L6|653404|forkhead box D4-like 6##BC103887|FOXD4L6|653404|forkhead box D4-like 6##BC033073|PGM5|5239|phosphoglucomutase 5##NM_021965|PGM5|5239|phosphoglucomutase 5##DQ890797|C9orf71|169693|chromosome 9 open reading frame 71##DQ893952|C9orf71|169693|chromosome 9 open reading frame 71##BC029780|C9orf71|169693|chromosome 9 open reading frame 71##NM_153237|C9orf71|169693|chromosome 9 open reading frame 71	0.584332	CTCF.p2:11:0.584
chr15	82979245	82979372	reg1004067.p1	14.366	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-34418	+	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	-34516	+	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	-154415	-	CR936602 NM_001164465	38870	-	NM_198181 CR936812	119433	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	229928	-	BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17	1.760578	CTCF.p2:7:0.999	CTCF.p2:100:0.762
chr3	57023008	57023157	reg1003427.p1	14.366	+	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	-187171	-	AK293864 AB209661 NM_001128616	-213413	-	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-305875	-	AY221117 NM_181727 BC126274 BC136498	71421	+	AF433662 AK302493 NM_001128615	90231	-	AF458067 TSC_hg19_v1_chr3_-_57199347	176251	-	AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12##AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF458067|IL17RD|54756|interleukin 17 receptor D	1.111887	CTCF.p2:28:1.000
chr6	135466226	135466366	reg1002293.p1	14.366	+	TSC_hg19_v1_chr6_-_135375958 AK024258 AK295545 AF161394 U87791 AJ459826 AJ459827 NM_001145158 NM_001145207 NM_006620	-90302	-	CU674720 EU831981 EU832074 TSC_hg19_v1_chr6_-_135375948 BC040849 AJ420551 BC001465	-90408	-	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	-195064	-	TSC_hg19_v1_chr6_+_135502445 AJ606317 AJ606318 AJ606319 AJ606320 AJ606321 AJ606322 AJ606323 AJ606324 NM_001130172 NM_001130173 NM_001161656 NM_001161657 NM_001161658 NM_001161659 NM_001161660 NM_005375 X52125	36152	+	TSC_hg19_v1_chr6_+_135502507 BC064955	36199	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	36290	+	AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)##AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)##AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)##U87791|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)##EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)##EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)##BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)##BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	0.0	
chr11	19333031	19333149	reg1002406.p1	14.365	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-69889	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-70615	-	U20324 U72899 U49837 BC057221 NM_001127656 TSC_hg19_v1_chr11_-_19223531 AK313289 NM_003476 AF121260	-109532	-	AB063115 NM_001111018 AJ488205	39225	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	401776	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	711298	+	AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##U20324|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U72899|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U49837|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##BC057221|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_001127656|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AK313289|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_003476|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AF121260|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2	0.424371	CTCF.p2:-20:0.424
chr11	3430089	3430216	reg1003552.p1	14.365	+	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	-29773	-	AK293940 NM_001039165	-176537	-	AB529240 AY255583 NM_001164377	-190110	-	NM_053017 NM_001079536 Y16835	233362	-	BC017828 BC069102 NM_004314 S74683 BC111729	236218	+	AB528800 AJ278118 AJ295237 BC136250 BC143303 AF199235 NM_020402	262426	-	BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195##AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##NM_053017|ART5|116969|ADP-ribosyltransferase 5##NM_001079536|ART5|116969|ADP-ribosyltransferase 5##Y16835|ART5|116969|ADP-ribosyltransferase 5##BC017828|ART1|417|ADP-ribosyltransferase 1##BC069102|ART1|417|ADP-ribosyltransferase 1##NM_004314|ART1|417|ADP-ribosyltransferase 1##S74683|ART1|417|ADP-ribosyltransferase 1##BC111729|ART1|417|ADP-ribosyltransferase 1##AJ278118|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AJ295237|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC136250|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC143303|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AF199235|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##NM_020402|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10	1.56925	CTCF.p2:-9:0.581	CTCF.p2:28:0.988
chr19	8082836	8082933	reg1002912.p1	14.365	+	TSC_hg19_v1_chr19_-_8070526 U38175 BC003376 NM_001419	-12359	-	TSC_hg19_v1_chr19_-_8008615 AK289634 NM_006351	-74228	-	AF026030 BC000679 AB590328 CU689670 BC033628 TSC_hg19_v1_chr19_-_8008548 DQ891301 DQ894486 AK223062 AK309415 AF041254	-74332	-	AK292662 NM_001201359 NM_005624	34761	+	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	35063	+	AB384635 AB053450 BC153882 NM_032447	129491	-	U38175|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##BC003376|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##NM_001419|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##AK289634|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##NM_006351|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AF026030|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##BC033628|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##DQ891301|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##DQ894486|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK223062|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK309415|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AF041254|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK292662|CCL25|6370|chemokine (C-C motif) ligand 25##NM_001201359|CCL25|6370|chemokine (C-C motif) ligand 25##NM_005624|CCL25|6370|chemokine (C-C motif) ligand 25##BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25##AB053450|FBN3|84467|fibrillin 3##BC153882|FBN3|84467|fibrillin 3##NM_032447|FBN3|84467|fibrillin 3	0.0	
chr6	143896630	143896752	reg1002955.p1	14.365	+	CU678350 AK296485 BC003060 AK075458 TSC_hg19_v1_chr6_-_143832841 AY358551 BC051268 AK315475 NM_032020	-63797	-	TSC_hg19_v1_chr6_+_143771941 NM_003630 BC014551 BC015506 AB035307 AK025644 AK300907 AJ001625 AJ131389 AY277600 CR542062 CU677325	-124691	+	TSC_hg19_v1_chr6_-_143771811 BC037955 NM_182503	-124862	-	NM_001100166 NM_014721 AK300221 AB014580 BC152416 BC150630	32671	+	TSC_hg19_v1_chr6_+_143999112 AK298263 NM_001100164 NM_001100165 CR749345 AK297799	102486	+	TSC_hg19_v1_chr6_+_144164476 AK095269 BC009855 NM_032860	267798	+	AK296485|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC003060|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK075458|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AY358551|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC051268|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK315475|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_032020|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_003630|PEX3|8504|peroxisomal biogenesis factor 3##BC014551|PEX3|8504|peroxisomal biogenesis factor 3##BC015506|PEX3|8504|peroxisomal biogenesis factor 3##AB035307|PEX3|8504|peroxisomal biogenesis factor 3##AK025644|PEX3|8504|peroxisomal biogenesis factor 3##AK300907|PEX3|8504|peroxisomal biogenesis factor 3##AJ001625|PEX3|8504|peroxisomal biogenesis factor 3##AJ131389|PEX3|8504|peroxisomal biogenesis factor 3##AY277600|PEX3|8504|peroxisomal biogenesis factor 3##CR542062|PEX3|8504|peroxisomal biogenesis factor 3##BC037955|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_182503|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_001100166|PHACTR2|9749|phosphatase and actin regulator 2##NM_014721|PHACTR2|9749|phosphatase and actin regulator 2##AK300221|PHACTR2|9749|phosphatase and actin regulator 2##AB014580|PHACTR2|9749|phosphatase and actin regulator 2##BC152416|PHACTR2|9749|phosphatase and actin regulator 2##BC150630|PHACTR2|9749|phosphatase and actin regulator 2##AK298263|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100164|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100165|PHACTR2|9749|phosphatase and actin regulator 2##CR749345|PHACTR2|9749|phosphatase and actin regulator 2##AK297799|PHACTR2|9749|phosphatase and actin regulator 2##BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)##NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)	0.83404	CTCF.p2:-14:0.834
chr1	167503143	167503285	reg1004515.p1	14.364	+	AB590419 CU693020 DQ893778 EU176191 X55510 X55511 X55512 BC025703 AK128376 AK313946 J04132 AK223325 NM_000734 NM_198053	-15441	-	TSC_hg19_v1_chr1_+_167298389 AY113189 BC001664 BC003571	-204775	+	NM_001198783 TSC_hg19_v1_chr1_+_167298306	-204916	+	DQ891131 DQ894310 AB463481 AY359071 BC006786 BC008628 TSC_hg19_v1_chr1_-_167523000 AK130006 AK315497 AK075375 AK095456 AF084523	19777	-	TSC_hg19_v1_chr1_-_167523043 NM_003851	19849	-	AF545852 TSC_hg19_v1_chr1_+_167599495 NM_052862 AK130798	96199	+	DQ893778|CD247|919|CD247 molecule##EU176191|CD247|919|CD247 molecule##X55510|CD247|919|CD247 molecule##X55511|CD247|919|CD247 molecule##X55512|CD247|919|CD247 molecule##BC025703|CD247|919|CD247 molecule##AK128376|CD247|919|CD247 molecule##AK313946|CD247|919|CD247 molecule##J04132|CD247|919|CD247 molecule##AK223325|CD247|919|CD247 molecule##NM_000734|CD247|919|CD247 molecule##NM_198053|CD247|919|CD247 molecule##AY113189|POU2F1|5451|POU class 2 homeobox 1##BC001664|POU2F1|5451|POU class 2 homeobox 1##BC003571|POU2F1|5451|POU class 2 homeobox 1##NM_001198783|POU2F1|5451|POU class 2 homeobox 1##DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1##NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AF545852|RCSD1|92241|RCSD domain containing 1##NM_052862|RCSD1|92241|RCSD domain containing 1	0.022422	
chr7	50485846	50485981	reg1003714.p1	14.364	+	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	-137594	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	-141560	+	NM_001161834	-350232	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	32141	-	AJ310724 BC000485 BC008366 M76180 AK298321 NM_000790 NM_001242886 NM_001242887 NM_001242888 NM_001242889 NM_001242890 TSC_hg19_v1_chr7_-_50628769	142846	-	M88700 TSC_hg19_v1_chr7_-_50633103 AK298392 NM_001082971	147184	-	AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1##AJ310724|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC000485|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC008366|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##M76180|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298321|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_000790|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242886|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242887|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242888|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242889|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242890|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##M88700|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298392|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001082971|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	1.472172	CTCF.p2:-4:0.909	CTCF.p2:81:0.564
chr1	95271499	95271622	reg1002820.p1	14.362	+	AF497569 AF497570 BT019808 CR541792 AB528376 AF487337 DQ892755 M16553 TSC_hg19_v1_chr1_-_95007316 M27436 J02931 AK312638 AK310918 AY940729 BC011029 NM_001178096 NM_001993	-264285	-	AK296791 TSC_hg19_v1_chr1_+_94883971 AK302714 AK308159 BC068509 BC009712 X58528 AB529219 CU679455 BT006644 M81182	-387559	+	TSC_hg19_v1_chr1_+_94883966 NM_001122674 NM_002858	-387612	+	NM_001114106 AK303906 TSC_hg19_v1_chr1_+_95285935 BC033858 AX721168 AK301288 AK316123 AK313574	14394	+	NM_152369 TSC_hg19_v1_chr1_+_95286156 BC053877	14582	+	TSC_hg19_v1_chr1_+_95286194 AK300193	14639	+	AF497569|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF497570|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BT019808|F3|2152|coagulation factor III (thromboplastin, tissue factor)##CR541792|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF487337|F3|2152|coagulation factor III (thromboplastin, tissue factor)##DQ892755|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M16553|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M27436|F3|2152|coagulation factor III (thromboplastin, tissue factor)##J02931|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK312638|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK310918|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AY940729|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BC011029|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001178096|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001993|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK296791|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK302714|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK308159|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC068509|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC009712|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##X58528|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BT006644|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##M81182|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_001122674|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_002858|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_001114106|SLC44A3|126969|solute carrier family 44, member 3##AK303906|SLC44A3|126969|solute carrier family 44, member 3##BC033858|SLC44A3|126969|solute carrier family 44, member 3##AK301288|SLC44A3|126969|solute carrier family 44, member 3##AK316123|SLC44A3|126969|solute carrier family 44, member 3##AK313574|SLC44A3|126969|solute carrier family 44, member 3##NM_152369|SLC44A3|126969|solute carrier family 44, member 3##BC053877|SLC44A3|126969|solute carrier family 44, member 3##AK300193|SLC44A3|126969|solute carrier family 44, member 3	0.98532	CTCF.p2:5:0.985
chr10	74097009	74097150	reg1003902.p1	14.361	+	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-63255	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-120968	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-121291	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	17599	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	17847	-	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	186640	-	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1	0.99862	CTCF.p2:15:0.999
chr8	61325205	61325337	reg1003745.p1	14.360	+	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	-131350	-	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	-1293599	-	NM_003580 TSC_hg19_v1_chr8_-_59572413	-1752860	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	104169	+	AK297576 TSC_hg19_v1_chr8_+_61429494	104223	+	TSC_hg19_v1_chr8_+_61429545 AK312344	104275	+	BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family##AK297576|RAB2A|5862|RAB2A, member RAS oncogene family##AK312344|RAB2A|5862|RAB2A, member RAS oncogene family	0.99916	CTCF.p2:-8:0.999
chr8	41287731	41287866	reg1003792.p1	14.358	+	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	-120768	-	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	-532461	-	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	-1276780	+	TSC_hg19_v1_chr8_+_41348077 NM_001174124 NM_016099	60275	+	TSC_hg19_v1_chr8_+_41348100 AK026613	60301	+	TSC_hg19_v1_chr8_+_41348114 AB104615 BC001227 AF125102	60314	+	BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1##BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##NM_001174124|GOLGA7|51125|golgin A7##NM_016099|GOLGA7|51125|golgin A7##AK026613|GOLGA7|51125|golgin A7##AB104615|GOLGA7|51125|golgin A7##BC001227|GOLGA7|51125|golgin A7##AF125102|GOLGA7|51125|golgin A7	0.999243	CTCF.p2:-10:0.999
chr1	90270347	90270475	reg1003182.p1	14.356	+	TSC_hg19_v1_chr1_+_90098707 AK127881 AB081509 BC103929 BC113973	-171647	+	NM_032270 TSC_hg19_v1_chr1_+_90098643	-171766	+	TSC_hg19_v1_chr1_+_90098630 BC036122	-171778	+	TSC_hg19_v1_chr1_+_90286586 NM_001134479	16116	+	TSC_hg19_v1_chr1_+_90286603 AK092238 AX747423	16188	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	17047	+	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C##AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_001134479|LRRC8D|55144|leucine rich repeat containing 8 family, member D##AK092238|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D	0.990797	CTCF.p2:-14:0.991
chr20	58358237	58358343	reg1002539.p2	14.354	+	AB098521 AB098522 NM_183244 NM_183246	-62026	+	AJ617581 NM_001199506 AK316047	-106574	+	BC108303 AJ311122 NM_080672 TSC_hg19_v1_chr20_+_58179660 BC117362 BC117364	-178636	+	BC132864 BC132870 NM_014258	148900	-	BX648091 BX649108 BC146798 TSC_hg19_v1_chr20_-_58508726	150417	-	AK125073 NM_001190826	150528	+	AB098521|PHACTR3|116154|phosphatase and actin regulator 3##AB098522|PHACTR3|116154|phosphatase and actin regulator 3##NM_183244|PHACTR3|116154|phosphatase and actin regulator 3##NM_183246|PHACTR3|116154|phosphatase and actin regulator 3##AJ617581|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199506|PHACTR3|116154|phosphatase and actin regulator 3##AK316047|PHACTR3|116154|phosphatase and actin regulator 3##BC108303|PHACTR3|116154|phosphatase and actin regulator 3##AJ311122|PHACTR3|116154|phosphatase and actin regulator 3##NM_080672|PHACTR3|116154|phosphatase and actin regulator 3##BC117362|PHACTR3|116154|phosphatase and actin regulator 3##BC117364|PHACTR3|116154|phosphatase and actin regulator 3##BC132864|SYCP2|10388|synaptonemal complex protein 2##BC132870|SYCP2|10388|synaptonemal complex protein 2##NM_014258|SYCP2|10388|synaptonemal complex protein 2##BX648091|SYCP2|10388|synaptonemal complex protein 2##BX649108|SYCP2|10388|synaptonemal complex protein 2##BC146798|SYCP2|10388|synaptonemal complex protein 2##AK125073|C20orf177|63939|chromosome 20 open reading frame 177##NM_001190826|C20orf177|63939|chromosome 20 open reading frame 177	0.994798	CTCF.p2:2:0.995
chr3	14302786	14302909	reg1003279.p1	14.354	+	TSC_hg19_v1_chr3_+_14220355 AJ238095 AB463841 CR457185	-82496	+	TSC_hg19_v1_chr3_+_14220336 AF182418 AF182289 BC007055 AK312189	-82513	+	NM_014463 TSC_hg19_v1_chr3_+_14220319	-82573	+	TSC_hg19_v1_chr3_+_14444072 AK303649	141222	+	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	141269	+	NM_001080423	280740	-	AJ238095|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##CR457185|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182418|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182289|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC007055|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312189|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_014463|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2	0.999733	CTCF.p2:-19:1.000
chr5	154191540	154191671	reg1003769.p1	14.353	+	TSC_hg19_v1_chr5_+_154135038 AK091465 AX747001	-56524	+	TSC_hg19_v1_chr5_+_154134891 AB018274	-56710	+	BC001460 NM_015315 CU674716	-99132	+	TSC_hg19_v1_chr5_-_154230148 AK300938	38543	-	TSC_hg19_v1_chr5_-_154230158 AK023820 AK295546	38562	-	BC007216 NM_032385 TSC_hg19_v1_chr5_-_154230224	38613	-	AK091465|LARP1|23367|La ribonucleoprotein domain family, member 1##AB018274|LARP1|23367|La ribonucleoprotein domain family, member 1##BC001460|LARP1|23367|La ribonucleoprotein domain family, member 1##NM_015315|LARP1|23367|La ribonucleoprotein domain family, member 1##AK300938|C5orf4|10826|chromosome 5 open reading frame 4##AK023820|C5orf4|10826|chromosome 5 open reading frame 4##AK295546|C5orf4|10826|chromosome 5 open reading frame 4##BC007216|C5orf4|10826|chromosome 5 open reading frame 4##NM_032385|C5orf4|10826|chromosome 5 open reading frame 4	0.389304	CTCF.p2:16:0.389
chr3	168565183	168565321	reg1004349.p1	14.351	+	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	-751821	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	-752137	-	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-1111763	+	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	298827	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	299110	-	BX640908 NM_001164000	300269	-	AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus	0.665673	CTCF.p2:21:0.666
chr1	6408128	6408249	reg1002517.p1	14.350	+	BC068275 NM_207370 TSC_hg19_v1_chr1_-_6321125	-87105	-	NM_001024598	-103937	+	TSC_hg19_v1_chr1_-_6296121 NM_012405	-112080	-	AB074419 AK291583 NM_181866	10796	-	AB074418 AK292202 NM_181865 AK304465	12554	-	AK290097 AB074417 NM_181864	37621	-	BC068275|GPR153|387509|G protein-coupled receptor 153##NM_207370|GPR153|387509|G protein-coupled receptor 153##NM_001024598|HES3|390992|hairy and enhancer of split 3 (Drosophila)##NM_012405|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##AB074419|ACOT7|11332|acyl-CoA thioesterase 7##AK291583|ACOT7|11332|acyl-CoA thioesterase 7##NM_181866|ACOT7|11332|acyl-CoA thioesterase 7##AB074418|ACOT7|11332|acyl-CoA thioesterase 7##AK292202|ACOT7|11332|acyl-CoA thioesterase 7##NM_181865|ACOT7|11332|acyl-CoA thioesterase 7##AK290097|ACOT7|11332|acyl-CoA thioesterase 7##AB074417|ACOT7|11332|acyl-CoA thioesterase 7##NM_181864|ACOT7|11332|acyl-CoA thioesterase 7	0.995034	CTCF.p2:-12:0.995
chr2	112493996	112494123	reg1003913.p1	14.350	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-615572	+	AK300513 NM_001142807 BC022268	-1003880	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-1058237	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	147567	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	147702	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	162126	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.999571	CTCF.p2:12:1.000
chr2	64276956	64277095	reg1002667.p1	14.350	+	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	-30520	-	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	-30763	-	BX647825 NM_006759 AK314263 TSC_hg19_v1_chr2_+_64069029 BC047004 BC000173	-207999	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	94499	-	TSC_hg19_v1_chr2_+_64681295 NM_014181	404275	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	404623	+	AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BX647825|UGP2|7360|UDP-glucose pyrophosphorylase 2##NM_006759|UGP2|7360|UDP-glucose pyrophosphorylase 2##AK314263|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC047004|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC000173|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like	0.986912	CTCF.p2:-3:0.987
chr2	219166128	219166270	reg1003773.p1	14.348	+	TSC_hg19_v1_chr2_-_219157237 AF193045 BC007980 AK095270 AK300597 AK298123 BC026348 AK130713 AK298500 BC026693 AK130380 BC013428 NM_022152	-8944	-	AF318057 AF417001 NM_001077399 NM_015488 AK289867 TSC_hg19_v1_chr2_+_219135241 BC036457 AY039043 BC021118 AL080092 CU676836 EU831585 EU831670 AB033010	-31006	+	AK131047 TSC_hg19_v1_chr2_-_219134886 NM_001087	-31319	-	TSC_hg19_v1_chr2_+_219187970 NM_022572	21716	+	TSC_hg19_v1_chr2_+_219188021 AY358753 CU678300 AM393075 AM393168 BC002937 AK309308	21838	+	BC052750 NM_198559 CU690932	55392	+	AF193045|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC007980|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK300597|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK298123|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC026348|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK130713|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK298500|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC026693|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK130380|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC013428|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##NM_022152|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AF318057|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AF417001|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##NM_001077399|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##NM_015488|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK289867|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC036457|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AY039043|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC021118|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AL080092|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##EU831585|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##EU831670|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AB033010|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK131047|AAMP|14|angio-associated, migratory cell protein##NM_001087|AAMP|14|angio-associated, migratory cell protein##NM_022572|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AY358753|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AM393075|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AM393168|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC002937|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK309308|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC052750|C2orf62|375307|chromosome 2 open reading frame 62##NM_198559|C2orf62|375307|chromosome 2 open reading frame 62	0.999223	CTCF.p2:-16:0.999
chr4	3986653	3986790	reg1004414.p1	14.348	+	BC044637 TSC_hg19_v1_chr4_-_3957162	-29566	-	J03853 NM_000683	-218426	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-218603	+	BC130430 BC130432 NM_177998	241896	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	263227	-	TSC_hg19_v1_chr4_-_4291782 AL136750 NM_001145725	305046	-	BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128##AL136750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_001145725|LYAR|55646|Ly1 antibody reactive homolog (mouse)	0.995288	CTCF.p2:-13:0.995
chr2	234620187	234620307	reg1003752.p1	14.347	+	NM_001072 BC011409 BC019861 DQ364250 AY435141	-18667	+	NM_205862 AK124100	-19914	+	AB527235 AY435142 NM_019077 U89507	-29664	+	AY435140 NM_019078	1390	+	AK313623 M57951 NM_007120 BC139784 AY435139 BC121036 DQ364249 BC131623	7201	+	AY435138 NM_019093	17525	+	NM_001072|UGT1A6|54578|UDP glucuronosyltransferase 1 family, polypeptide A6##BC011409|UGT1A6|54578|UDP glucuronosyltransferase 1 family, polypeptide A6##BC019861|UGT1A6|54578|UDP glucuronosyltransferase 1 family, polypeptide A6##DQ364250|UGT1A6|54578|UDP glucuronosyltransferase 1 family, polypeptide A6##AY435141|UGT1A6|54578|UDP glucuronosyltransferase 1 family, polypeptide A6##NM_205862|UGT1A6|54578|UDP glucuronosyltransferase 1 family, polypeptide A6##AY435142|UGT1A7|54577|UDP glucuronosyltransferase 1 family, polypeptide A7##NM_019077|UGT1A7|54577|UDP glucuronosyltransferase 1 family, polypeptide A7##U89507|UGT1A7|54577|UDP glucuronosyltransferase 1 family, polypeptide A7##AY435140|UGT1A5|54579|UDP glucuronosyltransferase 1 family, polypeptide A5##NM_019078|UGT1A5|54579|UDP glucuronosyltransferase 1 family, polypeptide A5##AK313623|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4##M57951|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4##NM_007120|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4##BC139784|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4##AY435139|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4##BC121036|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4##BC131623|UGT1A4|54657|UDP glucuronosyltransferase 1 family, polypeptide A4##AY435138|UGT1A3|54659|UDP glucuronosyltransferase 1 family, polypeptide A3##NM_019093|UGT1A3|54659|UDP glucuronosyltransferase 1 family, polypeptide A3	0.998859	CTCF.p2:6:0.999
chr12	5193532	5193656	reg1003856.p1	14.346	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	-40475	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	-174534	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	-275179	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	347682	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	409744	+	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	860880	-	M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2	0.207753	CTCF.p2:6:0.208
chr9	20941197	20941341	reg1003790.p1	14.346	+	AK056522 AY139834 NM_017794	-282962	+	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	-318773	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	-318821	-	BC114215 TSC_hg19_v1_chr9_-_21031636 BX648779 NM_001010915	90362	-	AB451491 AB451323 AB451452 BC069314 BC096150 BC096151 BC096152 BC096153 V00547 AB587428 V00546 M25460 M28622 NM_002176	136604	-	NM_002177	200874	-	AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC114215|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##BX648779|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##NM_001010915|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##AB451323|IFNB1|3456|interferon, beta 1, fibroblast##AB451452|IFNB1|3456|interferon, beta 1, fibroblast##BC069314|IFNB1|3456|interferon, beta 1, fibroblast##BC096150|IFNB1|3456|interferon, beta 1, fibroblast##BC096151|IFNB1|3456|interferon, beta 1, fibroblast##BC096152|IFNB1|3456|interferon, beta 1, fibroblast##BC096153|IFNB1|3456|interferon, beta 1, fibroblast##V00547|IFNB1|3456|interferon, beta 1, fibroblast##V00546|IFNB1|3456|interferon, beta 1, fibroblast##M25460|IFNB1|3456|interferon, beta 1, fibroblast##M28622|IFNB1|3456|interferon, beta 1, fibroblast##NM_002176|IFNB1|3456|interferon, beta 1, fibroblast##NM_002177|IFNW1|3467|interferon, omega 1	0.999554	CTCF.p2:1:1.000
chr20	57663009	57663132	reg1002901.p1	14.345	+	TSC_hg19_v1_chr20_-_57617873 AK314449 AK002157 BC010649 BC013969 AF151865 AK298135 NM_016045	-45202	-	BT007293 TSC_hg19_v1_chr20_-_57607361 BC003671 BC001690 AK315493 AK026556 AF077045 AF052955 BC105811 NM_006886	-55707	-	AJ292757 NM_030773	-68762	+	NM_178457	103004	+	BC008876 TSC_hg19_v1_chr20_+_57875490 BC053866 NM_000114 NM_207032 NM_207033 NM_207034	212419	+	TSC_hg19_v1_chr20_+_57875665 J05081 X52001 AB590897 CU679163 BT007085 DQ096281	212687	+	AK314449|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK002157|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC010649|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC013969|SLMO2|51012|slowmo homolog 2 (Drosophila)##AF151865|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK298135|SLMO2|51012|slowmo homolog 2 (Drosophila)##NM_016045|SLMO2|51012|slowmo homolog 2 (Drosophila)##BT007293|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC003671|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC001690|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK315493|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK026556|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF077045|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF052955|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC105811|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##NM_006886|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AJ292757|TUBB1|81027|tubulin, beta 1 class VI##NM_030773|TUBB1|81027|tubulin, beta 1 class VI##NM_178457|ZNF831|128611|zinc finger protein 831##BC008876|EDN3|1908|endothelin 3##BC053866|EDN3|1908|endothelin 3##NM_000114|EDN3|1908|endothelin 3##NM_207032|EDN3|1908|endothelin 3##NM_207033|EDN3|1908|endothelin 3##NM_207034|EDN3|1908|endothelin 3##J05081|EDN3|1908|endothelin 3##X52001|EDN3|1908|endothelin 3##BT007085|EDN3|1908|endothelin 3##DQ096281|EDN3|1908|endothelin 3	0.993339	CTCF.p2:6:0.993
chr2	97466832	97466959	reg1001878.p1	14.344	+	AK293915 TSC_hg19_v1_chr2_+_97454352	-12558	+	TSC_hg19_v1_chr2_+_97426638 BC063295 NM_020184 AF202777 AB046812	-40146	+	AK304515 AK075347 AK295463 AK299740 AK301077 AK308085 AK316331 AL136617 TSC_hg19_v1_chr2_-_97405802 AK312249 NM_001142292 NM_030805 AK310100	-61082	-	TSC_hg19_v1_chr2_+_97482006 BC037272 AK126847 NM_017623 NM_199078 BC007199 AF216965 AK000025 CU675553	15587	+	AF492401 AY196212 BC107056 AK057011 AK092564 AX747600 NM_144994	42850	-	TSC_hg19_v1_chr2_-_97523744 AB528054 CU689148 AF151034 BC031303 AB209367 AK312193 NM_016466	56847	-	AK293915|CNNM4|26504|cyclin M4##BC063295|CNNM4|26504|cyclin M4##NM_020184|CNNM4|26504|cyclin M4##AF202777|CNNM4|26504|cyclin M4##AB046812|CNNM4|26504|cyclin M4##AK304515|LMAN2L|81562|lectin, mannose-binding 2-like##AK075347|LMAN2L|81562|lectin, mannose-binding 2-like##AK295463|LMAN2L|81562|lectin, mannose-binding 2-like##AK299740|LMAN2L|81562|lectin, mannose-binding 2-like##AK301077|LMAN2L|81562|lectin, mannose-binding 2-like##AK308085|LMAN2L|81562|lectin, mannose-binding 2-like##AK316331|LMAN2L|81562|lectin, mannose-binding 2-like##AL136617|LMAN2L|81562|lectin, mannose-binding 2-like##AK312249|LMAN2L|81562|lectin, mannose-binding 2-like##NM_001142292|LMAN2L|81562|lectin, mannose-binding 2-like##NM_030805|LMAN2L|81562|lectin, mannose-binding 2-like##AK310100|LMAN2L|81562|lectin, mannose-binding 2-like##BC037272|CNNM3|26505|cyclin M3##AK126847|CNNM3|26505|cyclin M3##NM_017623|CNNM3|26505|cyclin M3##NM_199078|CNNM3|26505|cyclin M3##BC007199|CNNM3|26505|cyclin M3##AF216965|CNNM3|26505|cyclin M3##AK000025|CNNM3|26505|cyclin M3##AF492401|ANKRD23|200539|ankyrin repeat domain 23##AY196212|ANKRD23|200539|ankyrin repeat domain 23##BC107056|ANKRD23|200539|ankyrin repeat domain 23##AK057011|ANKRD23|200539|ankyrin repeat domain 23##AK092564|ANKRD23|200539|ankyrin repeat domain 23##NM_144994|ANKRD23|200539|ankyrin repeat domain 23##AF151034|ANKRD39|51239|ankyrin repeat domain 39##BC031303|ANKRD39|51239|ankyrin repeat domain 39##AK312193|ANKRD39|51239|ankyrin repeat domain 39##NM_016466|ANKRD39|51239|ankyrin repeat domain 39	0.877084	CTCF.p2:10:0.877
chr10	105245562	105245679	reg1003816.p1	14.339	+	BC043367 NM_001129742	-6624	-	BC036193 BC036208 NM_001001412	-26975	-	TSC_hg19_v1_chr10_-_105212166 AK022195 NM_015916	-33457	-	NM_004210 U87864	8114	+	AK299620 TSC_hg19_v1_chr10_+_105344798	99147	+	AB385330 TSC_hg19_v1_chr10_-_105420936	175288	-	BC043367|CALHM3|119395|calcium homeostasis modulator 3##NM_001129742|CALHM3|119395|calcium homeostasis modulator 3##BC036193|CALHM1|255022|calcium homeostasis modulator 1##BC036208|CALHM1|255022|calcium homeostasis modulator 1##NM_001001412|CALHM1|255022|calcium homeostasis modulator 1##AK022195|CALHM2|51063|calcium homeostasis modulator 2##NM_015916|CALHM2|51063|calcium homeostasis modulator 2##NM_004210|NEURL|9148|neuralized homolog (Drosophila)##U87864|NEURL|9148|neuralized homolog (Drosophila)##AK299620|NEURL|9148|neuralized homolog (Drosophila)	0.804492	CTCF.p2:4:0.804
chr6	3279911	3280048	reg1002631.p1	14.337	+	TSC_hg19_v1_chr6_-_3272352 BC090851 BC022217	-7549	-	TSC_hg19_v1_chr6_+_3259232 AK126623 AK095683	-20740	+	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	-20821	+	BC128580 BC128581 BC038748 NM_021945	165228	-	TSC_hg19_v1_chr6_-_3456513 AL110245	176535	-	BC040876 NM_015482	176784	-	BC090851|SLC22A23|63027|solute carrier family 22, member 23##BC022217|SLC22A23|63027|solute carrier family 22, member 23##AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##BC128580|SLC22A23|63027|solute carrier family 22, member 23##BC128581|SLC22A23|63027|solute carrier family 22, member 23##BC038748|SLC22A23|63027|solute carrier family 22, member 23##NM_021945|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23	0.996762	CTCF.p2:-9:0.997
chr6	160284426	160284563	reg1002675.p1	14.335	+	TSC_hg19_v1_chr6_+_160221313 AK097559 NM_173516 AK093139 AX747947 BC112246	-63151	+	TSC_hg19_v1_chr6_+_160211500 NM_014161 AF161556 BC001623 AL136633 AK292647 AB528185 AM393775 CR533491	-72944	+	TSC_hg19_v1_chr6_+_160210978 AK311391	-73491	+	BC069142 BC069581 BC110454 NM_002377 CU686912 CR542261	43485	+	TSC_hg19_v1_chr6_+_160390137 NM_000876 Y00285 J03528	105639	+	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	258420	+	AK097559|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_173516|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##AK093139|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##BC112246|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_014161|MRPL18|29074|mitochondrial ribosomal protein L18##AF161556|MRPL18|29074|mitochondrial ribosomal protein L18##BC001623|MRPL18|29074|mitochondrial ribosomal protein L18##AL136633|MRPL18|29074|mitochondrial ribosomal protein L18##AM393775|MRPL18|29074|mitochondrial ribosomal protein L18##CR533491|MRPL18|29074|mitochondrial ribosomal protein L18##AK311391|MRPL18|29074|mitochondrial ribosomal protein L18##BC069142|MAS1|4142|MAS1 oncogene##BC069581|MAS1|4142|MAS1 oncogene##BC110454|MAS1|4142|MAS1 oncogene##NM_002377|MAS1|4142|MAS1 oncogene##CR542261|MAS1|4142|MAS1 oncogene##NM_000876|IGF2R|3482|insulin-like growth factor 2 receptor##Y00285|IGF2R|3482|insulin-like growth factor 2 receptor##J03528|IGF2R|3482|insulin-like growth factor 2 receptor##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1	0.981808	CTCF.p2:-14:0.982
chr2	113642614	113642735	reg1002549.p2	14.334	+	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	-48330	-	NM_000575 BC035169	-99702	-	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	-120452	-	AF167368 AF200496 NM_014439 NM_173202 NM_173203 NM_173204 BC020637 AB451333 AB451478 AB590279 AF251119 AF251120 AY071840 AY071841 CU676594 DQ891388	27894	+	AF201832 NM_173205	30095	+	AY359111 AF200492 NM_019618 AF206696	92927	+	X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##AF167368|IL37|27178|interleukin 37##AF200496|IL37|27178|interleukin 37##NM_014439|IL37|27178|interleukin 37##NM_173202|IL37|27178|interleukin 37##NM_173203|IL37|27178|interleukin 37##NM_173204|IL37|27178|interleukin 37##BC020637|IL37|27178|interleukin 37##AB451333|IL37|27178|interleukin 37##AB451478|IL37|27178|interleukin 37##AF251119|IL37|27178|interleukin 37##AF251120|IL37|27178|interleukin 37##AY071840|IL37|27178|interleukin 37##AY071841|IL37|27178|interleukin 37##DQ891388|IL37|27178|interleukin 37##AF201832|IL37|27178|interleukin 37##NM_173205|IL37|27178|interleukin 37##AY359111|IL36G|56300|interleukin 36, gamma##AF200492|IL36G|56300|interleukin 36, gamma##NM_019618|IL36G|56300|interleukin 36, gamma##AF206696|IL36G|56300|interleukin 36, gamma	0.997698	CTCF.p2:2:0.998
chr7	17570762	17570878	reg1002854.p1	14.333	+	TSC_hg19_v1_chr7_+_17382906 BC021696	-187914	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	-232551	+	AY359065 BC058284 NM_176813	-649216	-	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	409229	-	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	409307	-	BC062797 BC005309 M57423 NM_175886	496645	-	BC021696|AHR|196|aryl hydrocarbon receptor##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13##AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1	0.675924	CTCF.p2:11:0.676
chrX	24414012	24414135	reg1003820.p1	14.333	+	NM_001136234	-33196	+	NM_001136233	-82642	-	X59739 X59740 TSC_hg19_v1_chrX_+_24167864	-246201	+	NM_001142386 NM_005391 AK301965 TSC_hg19_v1_chrX_+_24483405 BC015948 L42452 CU677533	69384	+	AF148464 AF052510 TSC_hg19_v1_chrX_-_24665422	251252	-	AK315323 NM_001163265 NM_004845 TSC_hg19_v1_chrX_-_24665465	251386	-	NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1##NM_001136233|FAM48B2|170067|family with sequence similarity 48, member B2##X59739|ZFX|7543|zinc finger protein, X-linked##X59740|ZFX|7543|zinc finger protein, X-linked##NM_001142386|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_005391|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AK301965|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##BC015948|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##L42452|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	0.195673	
chr1	153590205	153590344	reg1003267.p1	14.332	+	AY007220 TSC_hg19_v1_chr1_-_153588799 NM_020672	-1476	-	TSC_hg19_v1_chr1_-_153585546 BC010541 NM_080388 AY221961 BC019099 AY762098	-4710	-	BC095462 U92985 TSC_hg19_v1_chr1_-_153581484 AK290804	-8809	-	NM_001024213	9249	-	NM_001024212	9469	-	X99920 TSC_hg19_v1_chr1_-_153599982 NM_001024211	9768	-	AY007220|S100A14|57402|S100 calcium binding protein A14##NM_020672|S100A14|57402|S100 calcium binding protein A14##BC010541|S100A16|140576|S100 calcium binding protein A16##NM_080388|S100A16|140576|S100 calcium binding protein A16##AY221961|S100A16|140576|S100 calcium binding protein A16##BC019099|S100A16|140576|S100 calcium binding protein A16##AY762098|S100A16|140576|S100 calcium binding protein A16##BC095462|S100A16|140576|S100 calcium binding protein A16##U92985|S100A16|140576|S100 calcium binding protein A16##AK290804|S100A16|140576|S100 calcium binding protein A16##NM_001024213|S100A13|6284|S100 calcium binding protein A13##NM_001024212|S100A13|6284|S100 calcium binding protein A13##X99920|S100A13|6284|S100 calcium binding protein A13##NM_001024211|S100A13|6284|S100 calcium binding protein A13	0.965132	CTCF.p2:-16:0.965
chr12	42418106	42418244	reg1002966.p1	14.332	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	-586588	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	-835967	+	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	-1331893	+	TSC_hg19_v1_chr12_-_42538503 AK125141 NM_001099650 NM_173601 BC030023	120404	-	CU691510 EU446625 EU446756 AB527838 TSC_hg19_v1_chr12_-_42632024 BC037777 AK127531 AK291355 AK296191 AK294260 NM_001190977	213860	-	NM_001190979 NM_001190980 NM_005748 TSC_hg19_v1_chr12_-_42632167	213996	-	AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##AK125141|GXYLT1|283464|glucoside xylosyltransferase 1##NM_001099650|GXYLT1|283464|glucoside xylosyltransferase 1##NM_173601|GXYLT1|283464|glucoside xylosyltransferase 1##BC030023|GXYLT1|283464|glucoside xylosyltransferase 1##EU446625|YAF2|10138|YY1 associated factor 2##EU446756|YAF2|10138|YY1 associated factor 2##BC037777|YAF2|10138|YY1 associated factor 2##AK127531|YAF2|10138|YY1 associated factor 2##AK291355|YAF2|10138|YY1 associated factor 2##AK296191|YAF2|10138|YY1 associated factor 2##AK294260|YAF2|10138|YY1 associated factor 2##NM_001190977|YAF2|10138|YY1 associated factor 2##NM_001190979|YAF2|10138|YY1 associated factor 2##NM_001190980|YAF2|10138|YY1 associated factor 2##NM_005748|YAF2|10138|YY1 associated factor 2	0.995211	CTCF.p2:16:0.995
chr21	36262426	36262566	reg1004149.p2	14.332	+	TSC_hg19_v1_chr21_-_36260987 BC050363 X79549 D43967 D43968 NM_001001890 NM_001122607	-1515	-	L34598 D10570 TSC_hg19_v1_chr21_-_36260304	-2299	-	AF312386 AF312387 AY004251 TSC_hg19_v1_chr21_-_36259416 S60998	-3084	-	AB384992 AF419247 U19601 BC110828 TSC_hg19_v1_chr21_-_36421376 AK226159	158790	-	BC136380 BC136381 BC144053 TSC_hg19_v1_chr21_-_36421490	158982	-	TSC_hg19_v1_chr21_-_36421575 X90979	159071	-	BC050363|RUNX1|861|runt-related transcription factor 1##X79549|RUNX1|861|runt-related transcription factor 1##D43967|RUNX1|861|runt-related transcription factor 1##D43968|RUNX1|861|runt-related transcription factor 1##NM_001001890|RUNX1|861|runt-related transcription factor 1##NM_001122607|RUNX1|861|runt-related transcription factor 1##L34598|RUNX1|861|runt-related transcription factor 1##D10570|RUNX1|861|runt-related transcription factor 1##S60998|RUNX1|861|runt-related transcription factor 1##U19601|RUNX1|861|runt-related transcription factor 1##BC110828|RUNX1|861|runt-related transcription factor 1##AK226159|RUNX1|861|runt-related transcription factor 1##BC136380|RUNX1|861|runt-related transcription factor 1##BC136381|RUNX1|861|runt-related transcription factor 1##BC144053|RUNX1|861|runt-related transcription factor 1##X90979|RUNX1|861|runt-related transcription factor 1	0.986958	CTCF.p2:10:0.987
chrX	64801951	64802091	reg1003776.p1	14.332	+	TSC_hg19_v1_chrX_-_64754668 AK074087 BC014545 NM_001170649 NM_001170650 NM_031206	-47357	-	CU677041 TSC_hg19_v1_chrX_-_64754635 AK225059 AF116730 BC019302 BC018610 AK022587 AK097383 AK295591	-47406	-	BC140767 BC171781 NM_001010888 BX647241	-93362	+	NM_002444 TSC_hg19_v1_chrX_+_64887520	85496	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	85526	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	85627	+	AK074087|LAS1L|81887|LAS1-like (S. cerevisiae)##BC014545|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_001170649|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_001170650|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_031206|LAS1L|81887|LAS1-like (S. cerevisiae)##AK225059|LAS1L|81887|LAS1-like (S. cerevisiae)##AF116730|LAS1L|81887|LAS1-like (S. cerevisiae)##BC019302|LAS1L|81887|LAS1-like (S. cerevisiae)##BC018610|LAS1L|81887|LAS1-like (S. cerevisiae)##AK022587|LAS1L|81887|LAS1-like (S. cerevisiae)##AK097383|LAS1L|81887|LAS1-like (S. cerevisiae)##AK295591|LAS1L|81887|LAS1-like (S. cerevisiae)##BC140767|ZC3H12B|340554|zinc finger CCCH-type containing 12B##BC171781|ZC3H12B|340554|zinc finger CCCH-type containing 12B##NM_001010888|ZC3H12B|340554|zinc finger CCCH-type containing 12B##BX647241|ZC3H12B|340554|zinc finger CCCH-type containing 12B##NM_002444|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin	0.826351	CTCF.p2:-21:0.814
chr6	167785421	167785547	reg1003847.p1	14.328	+	AK093039 AK225984 AX747876 NM_031949 BC030650 AK301755 BC047411 AK314450 AY026506 CU688966 CU690408	-46867	+	AK091987 AX747293 NM_001143947 NM_018974 AJ422141 AJ508812 BC098248 BC099718 BC105635	-80608	+	NM_001145121	-201404	+	BC068592 U03399 BC063451 BC033909 BC034995 NM_004610	12473	-	AB016901 BC027853 TSC_hg19_v1_chr6_-_168197551	412056	-	TSC_hg19_v1_chr6_+_168227559 NM_001040000 NM_001207008 U02478 AB209420	442182	+	AK093039|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK225984|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##NM_031949|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC030650|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK301755|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC047411|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK314450|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AY026506|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK091987|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_001143947|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_018974|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ422141|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ508812|UNC93A|54346|unc-93 homolog A (C. elegans)##BC098248|UNC93A|54346|unc-93 homolog A (C. elegans)##BC099718|UNC93A|54346|unc-93 homolog A (C. elegans)##BC105635|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_001145121|TCP10L2|401285|t-complex 10-like 2 (mouse)##BC068592|TCP10|6953|t-complex 10 homolog (mouse)##U03399|TCP10|6953|t-complex 10 homolog (mouse)##BC063451|TCP10|6953|t-complex 10 homolog (mouse)##NM_004610|TCP10|6953|t-complex 10 homolog (mouse)##AB016901|C6orf123|26238|chromosome 6 open reading frame 123##BC027853|C6orf123|26238|chromosome 6 open reading frame 123##NM_001040000|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##NM_001207008|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##U02478|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##AB209420|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4	0.998602	CTCF.p2:5:0.999
chr3	47462655	47462776	reg1002770.p1	14.327	+	AB040904 NM_015466 TSC_hg19_v1_chr3_+_47422510 AK055157 AK299906 AK295888 AK289502 AB025194 AF290614 AK295877 BC089042	-40183	+	NM_025010 TSC_hg19_v1_chr3_+_47324433 AK023765 AK291477 AK295292 BX537953 BC015962 AB527175 AM393269 AM393767 BC032620	-138287	+	BC015311 NM_001134878 NM_022342 NM_182902	-138420	-	TSC_hg19_v1_chr3_-_47517349 AK300311	54622	-	TSC_hg19_v1_chr3_-_47517417 AK291484 D83782 NM_012235	54717	-	DQ787088 BC000623 BC014204 TSC_hg19_v1_chr3_-_47555203 AK225721 AK000218 AK298202 NM_001031703	92427	-	AB040904|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_015466|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK055157|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK299906|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295888|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK289502|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AB025194|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AF290614|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295877|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##BC089042|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)##AK023765|KLHL18|23276|kelch-like 18 (Drosophila)##AK291477|KLHL18|23276|kelch-like 18 (Drosophila)##AK295292|KLHL18|23276|kelch-like 18 (Drosophila)##BX537953|KLHL18|23276|kelch-like 18 (Drosophila)##BC015962|KLHL18|23276|kelch-like 18 (Drosophila)##AM393269|KLHL18|23276|kelch-like 18 (Drosophila)##AM393767|KLHL18|23276|kelch-like 18 (Drosophila)##BC032620|KLHL18|23276|kelch-like 18 (Drosophila)##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9##AK300311|SCAP|22937|SREBF chaperone##AK291484|SCAP|22937|SREBF chaperone##D83782|SCAP|22937|SREBF chaperone##NM_012235|SCAP|22937|SREBF chaperone##DQ787088|C3orf75|54859|chromosome 3 open reading frame 75##BC000623|C3orf75|54859|chromosome 3 open reading frame 75##BC014204|C3orf75|54859|chromosome 3 open reading frame 75##AK225721|C3orf75|54859|chromosome 3 open reading frame 75##AK000218|C3orf75|54859|chromosome 3 open reading frame 75##AK298202|C3orf75|54859|chromosome 3 open reading frame 75##NM_001031703|C3orf75|54859|chromosome 3 open reading frame 75	1.08549	CTCF.p2:-9:0.999
chr7	101186223	101186347	reg1003873.p1	14.327	+	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	-180068	+	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	-221247	-	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-290719	-	BC002778 NM_138403	86290	-	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	272924	+	M74099 NM_181552	274596	+	NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1	1.01081	CTCF.p2:-11:0.941
chr2	225222229	225222346	reg1002629.p1	14.326	+	TSC_hg19_v1_chr2_-_224904004 BC015663 AK225823 AK297588 AK312499 NM_001136528 NM_006216	-318117	-	AK295564 NM_001136530	-318947	-	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	-355659	-	BC025754 NM_001122779 NM_024785 AK026399	44443	-	AF052147 BC031844 TSC_hg19_v1_chr2_-_225370764	148441	-	U58089 TSC_hg19_v1_chr2_-_225378353	156049	-	BC015663|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK225823|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK297588|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK312499|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136528|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_006216|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##BC025754|FAM124B|79843|family with sequence similarity 124B##NM_001122779|FAM124B|79843|family with sequence similarity 124B##NM_024785|FAM124B|79843|family with sequence similarity 124B##AK026399|FAM124B|79843|family with sequence similarity 124B##AF052147|CUL3|8452|cullin 3##BC031844|CUL3|8452|cullin 3##U58089|CUL3|8452|cullin 3	0.237975	CTCF.p2:-15:0.238
chr4	114468824	114468949	reg1002564.p1	14.326	+	TSC_hg19_v1_chr4_+_114214102 AK294720	-254767	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	-498052	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-729585	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	213395	-	TSC_hg19_v1_chr4_-_114682341 AK294517	213470	-	BC022558 TSC_hg19_v1_chr4_-_114682567	213680	-	AK294720|ANK2|287|ankyrin 2, neuronal##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK294517|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC022558|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.17354	
chr8	58333242	58333364	reg1002310.p1	14.325	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-426877	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-426901	-	TSC_hg19_v1_chr8_-_57906381 BC017797	-426925	-	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	573854	+	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	990582	+	X56088 M93133 BC101777 BC112184 NM_000780	1079404	-	AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	0.996008	CTCF.p2:-20:0.996
chr10	73468074	73468217	reg1004599.p1	14.324	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	-311407	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-389099	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-389120	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	11447	-	AK074172 NM_001168390	29435	-	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	65161	-	BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54	0.979463	CTCF.p2:2:0.979
chrX	101323070	101323218	reg1004470.p1	14.324	+	TSC_hg19_v1_chrX_-_101187001 AK094141 AK296520 NM_001011657	-136128	-	AJ277654 AJ277655 AJ277656 AJ277657 AJ277658 NM_032946	-210596	-	BC052628 AB011084 BC012541 BX648494 TSC_hg19_v1_chrX_-_100914836 AK291342 NM_014782 NM_177949	-408305	-	NM_080390 AK312138 AF325115	57542	+	BC071675 NM_001006938 TSC_hg19_v1_chrX_-_101397444	74263	-	NM_001159560 BC092450 AY833564 BC042818 BC106955 NM_001012978	87729	-	AK094141|ZMAT1|84460|zinc finger, matrin-type 1##AK296520|ZMAT1|84460|zinc finger, matrin-type 1##NM_001011657|ZMAT1|84460|zinc finger, matrin-type 1##AJ277654|NXF5|55998|nuclear RNA export factor 5##AJ277655|NXF5|55998|nuclear RNA export factor 5##AJ277656|NXF5|55998|nuclear RNA export factor 5##AJ277657|NXF5|55998|nuclear RNA export factor 5##AJ277658|NXF5|55998|nuclear RNA export factor 5##NM_032946|NXF5|55998|nuclear RNA export factor 5##BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2##AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2##BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2##BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2##AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2##NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2##NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2##NM_080390|TCEAL2|140597|transcription elongation factor A (SII)-like 2##AK312138|TCEAL2|140597|transcription elongation factor A (SII)-like 2##AF325115|TCEAL2|140597|transcription elongation factor A (SII)-like 2##BC071675|TCEAL6|158931|transcription elongation factor A (SII)-like 6##NM_001006938|TCEAL6|158931|transcription elongation factor A (SII)-like 6##NM_001159560|BEX5|340542|brain expressed, X-linked 5##BC092450|BEX5|340542|brain expressed, X-linked 5##AY833564|BEX5|340542|brain expressed, X-linked 5##BC042818|BEX5|340542|brain expressed, X-linked 5##BC106955|BEX5|340542|brain expressed, X-linked 5##NM_001012978|BEX5|340542|brain expressed, X-linked 5	0.986444	CTCF.p2:4:0.986
chr12	130396121	130396238	reg1002978.p1	14.323	+	BC114626 BC114936 NM_133448 AB061814	-7968	-	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	-1058092	+	BC043528 TSC_hg19_v1_chr12_+_129337985	-1058195	+	AK056047 TSC_hg19_v1_chr12_-_130646911	250677	-	TSC_hg19_v1_chr12_+_130647008 BC070037 NM_007197	250831	+	NM_001190971 NM_004764	426253	+	BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056047|FLJ31485|440119|uncharacterized LOC440119##BC070037|FZD10|11211|frizzled family receptor 10##NM_007197|FZD10|11211|frizzled family receptor 10##NM_001190971|PIWIL1|9271|piwi-like 1 (Drosophila)##NM_004764|PIWIL1|9271|piwi-like 1 (Drosophila)	0.088935	
chr6	36997163	36997283	reg1003935.p1	14.323	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-23722	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-42953	-	AK022783 TSC_hg19_v1_chr6_-_36953950 AF176006 AF192559 BC125055 BC153873 NM_014341 BC110914	-43246	-	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	140899	+	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	228163	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	228376	+	BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##AK022783|MTCH1|23787|mitochondrial carrier 1##AF176006|MTCH1|23787|mitochondrial carrier 1##AF192559|MTCH1|23787|mitochondrial carrier 1##BC125055|MTCH1|23787|mitochondrial carrier 1##BC153873|MTCH1|23787|mitochondrial carrier 1##NM_014341|MTCH1|23787|mitochondrial carrier 1##BC110914|MTCH1|23787|mitochondrial carrier 1##NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B	0.990039	CTCF.p2:-6:0.990
chr12	118312780	118312907	reg1002988.p1	14.322	+	AK294435 AF446135 EU753241 U17327 AK307481 NM_000620 NM_001204218	-513335	-	AF446136 TSC_hg19_v1_chr12_-_117799037	-513822	-	NM_001204214	-565629	-	NM_173598	93184	-	NM_001130112 NM_001206801 NM_007370 NM_181578 TSC_hg19_v1_chr12_+_118454507 AK291107 AK094575 AK290685 BC001866 BC013961 AB208992 BC020440 L07540 AB464140 CU674898 CR407651	141725	+	AK310892 TSC_hg19_v1_chr12_-_118498977 BC015887 AK298513 AF229181 NM_018639	186092	-	AK294435|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446135|NOS1|4842|nitric oxide synthase 1 (neuronal)##EU753241|NOS1|4842|nitric oxide synthase 1 (neuronal)##U17327|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK307481|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_000620|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204218|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446136|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_173598|KSR2|283455|kinase suppressor of ras 2##NM_001130112|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_001206801|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_007370|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_181578|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK291107|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK094575|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK290685|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC001866|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC013961|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AB208992|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC020440|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##L07540|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##CR407651|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK310892|WSB2|55884|WD repeat and SOCS box containing 2##BC015887|WSB2|55884|WD repeat and SOCS box containing 2##AK298513|WSB2|55884|WD repeat and SOCS box containing 2##AF229181|WSB2|55884|WD repeat and SOCS box containing 2##NM_018639|WSB2|55884|WD repeat and SOCS box containing 2	0.972956	CTCF.p2:-15:0.973
chr2	73312883	73312991	reg1003391.p1	14.322	+	TSC_hg19_v1_chr2_-_73298842 AL833454 AK314770 AK289731 AY044437 BC101311 BC101312 BC101313 NM_144579	-14048	-	TSC_hg19_v1_chr2_-_73298414 AK024193	-14501	-	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	-168284	+	AK023823 TSC_hg19_v1_chr2_-_73316784	3846	-	DQ890991 DQ894168 TSC_hg19_v1_chr2_-_73339998 BC099902	27047	-	TSC_hg19_v1_chr2_-_73340066 BC035013	27127	-	AL833454|SFXN5|94097|sideroflexin 5##AK314770|SFXN5|94097|sideroflexin 5##AK289731|SFXN5|94097|sideroflexin 5##AY044437|SFXN5|94097|sideroflexin 5##BC101311|SFXN5|94097|sideroflexin 5##BC101312|SFXN5|94097|sideroflexin 5##BC101313|SFXN5|94097|sideroflexin 5##NM_144579|SFXN5|94097|sideroflexin 5##AK024193|SFXN5|94097|sideroflexin 5##BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1##AK023823|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##DQ890991|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##DQ894168|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##BC099902|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##BC035013|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)	0.729636	CTCF.p2:2:0.730
chr7	105292926	105293049	reg1004359.p1	14.320	+	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	-71052	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	-120341	+	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	-130326	-	AK300338 NM_138495	26621	-	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	223998	-	TSC_hg19_v1_chr7_+_105517250 AK125261	224277	+	BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##AK125261|CDHR3|222256|cadherin-related family member 3	0.80597	CTCF.p2:-1:0.806
chr16	11626134	11626240	reg1002802.p1	14.317	+	TSC_hg19_v1_chr16_+_11439315 BC013040	-186869	+	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	-186893	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-251045	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	54000	-	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	54602	-	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	136111	+	BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin	0.999614	CTCF.p2:-13:1.000
chr3	120136141	120136270	reg1002877.p1	14.317	+	TSC_hg19_v1_chr3_-_120068162 AB528173 AM393236 BC013757 NM_001099678	-68064	-	NM_001168271 NM_153002	-173064	-	TSC_hg19_v1_chr3_+_119813618 BC035247	-322535	+	TSC_hg19_v1_chr3_-_120169846 AB527652 D89937 BC000055 U06863 AK300356 AK289388 AK291138 AK311050 AK300436 BX647421 AK312261 NM_007085	33632	-	NM_001168331 NM_004547 BC000855 BC146885 BC146887 BC146927 BC146932 TSC_hg19_v1_chr3_+_120315168	178942	+	TSC_hg19_v1_chr3_+_120315182 BC070285 AF044957 DQ891096 DQ894273 DQ894278 BC034579	178987	+	AM393236|LRRC58|116064|leucine rich repeat containing 58##BC013757|LRRC58|116064|leucine rich repeat containing 58##NM_001099678|LRRC58|116064|leucine rich repeat containing 58##NM_001168271|GPR156|165829|G protein-coupled receptor 156##NM_153002|GPR156|165829|G protein-coupled receptor 156##BC000055|FSTL1|11167|follistatin-like 1##U06863|FSTL1|11167|follistatin-like 1##AK300356|FSTL1|11167|follistatin-like 1##AK289388|FSTL1|11167|follistatin-like 1##AK291138|FSTL1|11167|follistatin-like 1##AK311050|FSTL1|11167|follistatin-like 1##AK300436|FSTL1|11167|follistatin-like 1##BX647421|FSTL1|11167|follistatin-like 1##AK312261|FSTL1|11167|follistatin-like 1##NM_007085|FSTL1|11167|follistatin-like 1##NM_001168331|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##NM_004547|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC000855|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146885|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146887|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146927|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146932|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC070285|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##AF044957|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ891096|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ894273|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ894278|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC034579|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa	0.828878	CTCF.p2:0:0.829
chr7	35956720	35956825	reg1002917.p1	14.317	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	-115920	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	-115939	+	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	-116062	+	TSC_hg19_v1_chr7_+_36192789 NM_030636	236033	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	236111	+	TSC_hg19_v1_chr7_+_36193025 AB051493	236283	+	DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##NM_030636|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1	0.99973	CTCF.p2:1:1.000
chr17	19105900	19105992	reg1002240.p1	14.316	+	BC157869 NM_001129778	-75165	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-155660	-	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-197867	-	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	34762	+	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	160023	-	TSC_hg19_v1_chr17_+_19281077 NM_139032 NM_139033 BC007404 BC007992 U29725 AK295376	175244	+	BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1##NM_139032|MAPK7|5598|mitogen-activated protein kinase 7##NM_139033|MAPK7|5598|mitogen-activated protein kinase 7##BC007404|MAPK7|5598|mitogen-activated protein kinase 7##BC007992|MAPK7|5598|mitogen-activated protein kinase 7##U29725|MAPK7|5598|mitogen-activated protein kinase 7##AK295376|MAPK7|5598|mitogen-activated protein kinase 7	1.011271	CTCF.p2:6:1.000
chr11	20631774	20631899	reg1003651.p1	14.315	+	NM_004211 AF085412	-10889	+	BC047226 TSC_hg19_v1_chr11_+_20409261 AK301449 AK298185 AK300591 BC037544 AB590779 EU831425 EU831518	-222576	+	NM_001145166 NM_001145167 NM_005788 TSC_hg19_v1_chr11_+_20409136 BC064831 BC019339 AK129984	-222720	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	59356	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	1582811	+	AB032435 NM_020346	1727830	+	NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##BC047226|PRMT3|10196|protein arginine methyltransferase 3##AK301449|PRMT3|10196|protein arginine methyltransferase 3##AK298185|PRMT3|10196|protein arginine methyltransferase 3##AK300591|PRMT3|10196|protein arginine methyltransferase 3##BC037544|PRMT3|10196|protein arginine methyltransferase 3##EU831425|PRMT3|10196|protein arginine methyltransferase 3##EU831518|PRMT3|10196|protein arginine methyltransferase 3##NM_001145166|PRMT3|10196|protein arginine methyltransferase 3##NM_001145167|PRMT3|10196|protein arginine methyltransferase 3##NM_005788|PRMT3|10196|protein arginine methyltransferase 3##BC064831|PRMT3|10196|protein arginine methyltransferase 3##BC019339|PRMT3|10196|protein arginine methyltransferase 3##AK129984|PRMT3|10196|protein arginine methyltransferase 3##AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	0.041978	
chr10	4698892	4699026	reg1004223.p1	14.313	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-871450	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-871648	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-1483954	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	169459	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	306555	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	306664	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.974257	CTCF.p2:10:0.974
chr12	111325936	111326039	reg1002665.p2	14.311	+	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-41184	+	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	-145231	-	TSC_hg19_v1_chr12_-_111180641 X74008 BC014073	-145331	-	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	32391	-	BC151245 NM_015267 AB006631 AF271236	145885	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	480859	-	AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##X74008|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC014073|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A	0.12903	
chr1	204472379	204472524	reg1003016.p1	14.310	+	TSC_hg19_v1_chr1_-_204463934 BC094741	-8686	-	BC132876 BC136645 BC144342 NM_002646 AK308153	-12953	-	TSC_hg19_v1_chr1_-_204380946 BC065280 AK222877 NM_032833 AK027650 AK303535 AK316092	-91511	-	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	13051	+	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	13159	+	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	182140	-	BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC132876|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC136645|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC144342|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_002646|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AK308153|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC065280|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK222877|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_032833|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK027650|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK303535|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2	0.990232	CTCF.p2:18:0.990
chr1	37920577	37920706	reg1002153.p1	14.310	+	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	-420866	-	NM_000760 NM_156039 NM_172313	-971727	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-972157	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	19456	+	TSC_hg19_v1_chr1_+_37940140 AK026884	19509	+	FJ695517 TSC_hg19_v1_chr1_+_37940180 AK093343 AX748065 BC005001	19546	+	AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A##FJ695517|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK093343|ZC3H12A|80149|zinc finger CCCH-type containing 12A##BC005001|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.999751	CTCF.p2:-20:1.000
chr2	26800813	26800926	reg1000550.p2	14.310	+	TSC_hg19_v1_chr2_+_26785463 NM_001105519	-15401	+	AF183185 NM_194248	-19304	-	AF107403 AF183186 AF183187 NM_004802 NM_194322 NM_194323	-99960	-	BC140923 NM_001029881 BC127685 BC127684	63353	-	TSC_hg19_v1_chr2_+_26915710 BC140701 NM_002246 AF006823 AF065163	114774	+	TSC_hg19_v1_chr2_+_26987155 AK000562 NM_017877 BC028081 BC035519 BX647807 AK075164 AK296996 BC011013 AK299598 AY358820 AK222929 BX648017 CU688388 CR457243	186300	+	NM_001105519|C2orf70|339778|chromosome 2 open reading frame 70##AF183185|OTOF|9381|otoferlin##NM_194248|OTOF|9381|otoferlin##AF107403|OTOF|9381|otoferlin##AF183186|OTOF|9381|otoferlin##AF183187|OTOF|9381|otoferlin##NM_004802|OTOF|9381|otoferlin##NM_194322|OTOF|9381|otoferlin##NM_194323|OTOF|9381|otoferlin##BC140923|CIB4|130106|calcium and integrin binding family member 4##NM_001029881|CIB4|130106|calcium and integrin binding family member 4##BC127685|CIB4|130106|calcium and integrin binding family member 4##BC127684|CIB4|130106|calcium and integrin binding family member 4##BC140701|KCNK3|3777|potassium channel, subfamily K, member 3##NM_002246|KCNK3|3777|potassium channel, subfamily K, member 3##AF006823|KCNK3|3777|potassium channel, subfamily K, member 3##AF065163|KCNK3|3777|potassium channel, subfamily K, member 3##AK000562|C2orf18|54978|chromosome 2 open reading frame 18##NM_017877|C2orf18|54978|chromosome 2 open reading frame 18##BC028081|C2orf18|54978|chromosome 2 open reading frame 18##BC035519|C2orf18|54978|chromosome 2 open reading frame 18##BX647807|C2orf18|54978|chromosome 2 open reading frame 18##AK075164|C2orf18|54978|chromosome 2 open reading frame 18##AK296996|C2orf18|54978|chromosome 2 open reading frame 18##BC011013|CENPA|1058|centromere protein A##AK299598|C2orf18|54978|chromosome 2 open reading frame 18##AY358820|C2orf18|54978|chromosome 2 open reading frame 18##AK222929|C2orf18|54978|chromosome 2 open reading frame 18##BX648017|C2orf18|54978|chromosome 2 open reading frame 18##CR457243|C2orf18|54978|chromosome 2 open reading frame 18	0.999726	CTCF.p2:3:1.000
chr10	82615249	82615380	reg1003719.p1	14.309	+	AK123978 NM_001145719	-314740	+	AK123885 NM_207372	-317657	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-401210	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	1019768	+	DQ857894 NM_001165973	1022128	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3283943	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.997644	CTCF.p2:5:0.998
chr8	10948530	10948651	reg1003582.p1	14.309	+	TSC_hg19_v1_chr8_-_10697386 AF205718 AF418553 AJ344104	-251181	-	AY238941 AY523566 BC093762 BC143382 NM_017884 TSC_hg19_v1_chr8_-_10697379 AY029161 AK313715 BC015479 AK296724	-251256	-	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	-360606	-	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	110275	-	TSC_hg19_v1_chr8_+_11141999 BC034990 NM_015458	193422	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	193765	+	AF205718|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF418553|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ344104|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY238941|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY523566|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC093762|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC143382|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##NM_017884|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AK313715|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC015479|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7##AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##BC034990|MTMR9|66036|myotubularin related protein 9##NM_015458|MTMR9|66036|myotubularin related protein 9##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9	0.999262	CTCF.p2:2:0.999
chr1	29111716	29111842	reg1002653.p1	14.308	+	TSC_hg19_v1_chr1_+_29063503 AK303833 NM_001172828 AF432214 AF155095 AF192968 DQ892157 DQ895352 CU678040 AB451335 AB451484	-48242	+	NM_001173128 NM_016258 BC002559 AK292581 TSC_hg19_v1_chr1_+_29063435	-48496	+	BC001473 AK315195 AK315436 AF173868 AF203694 AK023126 TSC_hg19_v1_chr1_+_28995361	-116451	+	NM_000911 U07882	26874	+	TSC_hg19_v1_chr1_+_29213611 AB209649 NM_001166005 NM_001166007 NM_004437 NM_203342 NM_203343	101812	+	TSC_hg19_v1_chr1_+_29213624 M14993 M61733 J03796	101878	+	AK303833|YTHDF2|51441|YTH domain family, member 2##NM_001172828|YTHDF2|51441|YTH domain family, member 2##AF432214|YTHDF2|51441|YTH domain family, member 2##AF155095|YTHDF2|51441|YTH domain family, member 2##AF192968|YTHDF2|51441|YTH domain family, member 2##DQ892157|YTHDF2|51441|YTH domain family, member 2##DQ895352|YTHDF2|51441|YTH domain family, member 2##AB451335|YTHDF2|51441|YTH domain family, member 2##AB451484|YTHDF2|51441|YTH domain family, member 2##NM_001173128|YTHDF2|51441|YTH domain family, member 2##NM_016258|YTHDF2|51441|YTH domain family, member 2##BC002559|YTHDF2|51441|YTH domain family, member 2##AK292581|YTHDF2|51441|YTH domain family, member 2##BC001473|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK315195|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK315436|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AF173868|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AF203694|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK023126|GMEB1|10691|glucocorticoid modulatory element binding protein 1##NM_000911|OPRD1|4985|opioid receptor, delta 1##U07882|OPRD1|4985|opioid receptor, delta 1##AB209649|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166005|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166007|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_004437|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203342|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203343|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M14993|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M61733|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##J03796|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	0.996879	CTCF.p2:7:0.997
chr20	52486439	52486578	reg1003977.p1	14.308	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-275709	-	AF041259 NM_006526	-286873	-	AK302570 NM_001193421	-684687	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	200554	-	AK315220 NM_003657	200795	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	304012	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.062673	
chr14	93250272	93250412	reg1003296.p1	14.307	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	-35383	-	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	-131519	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	-131706	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	10344	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	139102	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	139255	+	Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)	0.360557	CTCF.p2:19:0.361
chr20	47237138	47237266	reg1001850.p1	14.307	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-821884	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-822450	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1106518	+	AB037836 TSC_hg19_v1_chr20_-_47444291	207084	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	207237	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	301116	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.999674	CTCF.p2:-2:1.000
chr2	74814908	74815036	reg1003683.p1	14.307	+	AK222883 TSC_hg19_v1_chr2_+_74781875 BC111055 U70987 BC114440 AK127127 AK127656 AK314678 BC114497 AK296154 AB587402 AF180527 AK300097	-33109	+	NM_001381	-33461	+	AF311313 NM_032603 AF284815 AF282619 AK309474	-33898	-	BC025997 NM_138804	60191	-	TSC_hg19_v1_chr2_+_74881437 AK095587 AK312728 AL136552 NM_004263 AK075384 AK304358 AK291023 BC018361 BC038411 AK308166 AB021292 AB022317 AB463247 AM393735 CU676238 CU691566 DQ895677	66456	+	AF086198 NM_000189	244809	+	AK222883|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC111055|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##U70987|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC114440|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK127127|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK127656|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK314678|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC114497|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK296154|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF180527|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK300097|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##NM_001381|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF311313|LOXL3|84695|lysyl oxidase-like 3##NM_032603|LOXL3|84695|lysyl oxidase-like 3##AF284815|LOXL3|84695|lysyl oxidase-like 3##AF282619|LOXL3|84695|lysyl oxidase-like 3##AK309474|LOXL3|84695|lysyl oxidase-like 3##BC025997|C2orf65|130951|chromosome 2 open reading frame 65##NM_138804|C2orf65|130951|chromosome 2 open reading frame 65##AK312728|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AL136552|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##NM_004263|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK075384|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK304358|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK291023|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC018361|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC038411|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK308166|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AB021292|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AB022317|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AM393735|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##DQ895677|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AF086198|HK2|3099|hexokinase 2##NM_000189|HK2|3099|hexokinase 2	0.456765	CTCF.p2:14:0.457
chr6	36591335	36591473	reg1003553.p1	14.307	+	TSC_hg19_v1_chr6_+_36562140 AK304097 D28423 BC000914 BC069018 AF107405	-29224	+	TSC_hg19_v1_chr6_+_36562138 AK312553	-29268	+	NM_003017 TSC_hg19_v1_chr6_+_36562093	-29313	+	NM_001220777 NM_078467	52847	+	NM_000389 TSC_hg19_v1_chr6_+_36646486 AK309512 NM_001220778 U09579	55067	+	TSC_hg19_v1_chr6_+_36646490 BC013967 AB209881 BC001935 BC000312 L25610 L26165 U03106 S67388 BC000275 L47232 L47233 AY008263	55121	+	AK304097|SRSF3|6428|serine/arginine-rich splicing factor 3##BC000914|SRSF3|6428|serine/arginine-rich splicing factor 3##BC069018|SRSF3|6428|serine/arginine-rich splicing factor 3##AF107405|SRSF3|6428|serine/arginine-rich splicing factor 3##AK312553|SRSF3|6428|serine/arginine-rich splicing factor 3##NM_003017|SRSF3|6428|serine/arginine-rich splicing factor 3##NM_001220777|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_078467|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_000389|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK309512|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_001220778|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U09579|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC013967|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AB209881|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC001935|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000312|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L25610|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L26165|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U03106|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##S67388|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000275|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47232|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47233|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)	0.884219	CTCF.p2:-12:0.884
chr7	129882511	129882645	reg1004222.p1	14.307	+	BC017587 NM_145268 AK097635	-34870	+	TSC_hg19_v1_chr7_-_129845244 AK027678 BC057784 AK027709 BC045618 AK074732 NM_032842	-37302	-	TSC_hg19_v1_chr7_+_129710580 BC009977	-171979	+	BC007009 NM_001869 BC014571 BC015140 AK293378 U19977 DQ893811 CU675491 BT007403	24136	+	AK290993 NM_001163446 NM_016352 BC052289 AK310933 AK298553 AK298550 AK299023 AY358699 AF095719 AB590729 CU690898 HQ448429	50418	+	NM_001127441 NM_001127442 NM_080385 AK093288 AK315256 AX748034 BC039362 AY155230 BC053681 BC042996 AK131191 AY155229	102086	+	BC017587|C7orf45|136263|chromosome 7 open reading frame 45##NM_145268|C7orf45|136263|chromosome 7 open reading frame 45##AK097635|C7orf45|136263|chromosome 7 open reading frame 45##AK027678|TMEM209|84928|transmembrane protein 209##BC057784|TMEM209|84928|transmembrane protein 209##AK027709|TMEM209|84928|transmembrane protein 209##BC045618|TMEM209|84928|transmembrane protein 209##AK074732|TMEM209|84928|transmembrane protein 209##NM_032842|TMEM209|84928|transmembrane protein 209##BC009977|KLHDC10|23008|kelch domain containing 10##BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)##AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)##U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)##DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)##BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)##AK290993|CPA4|51200|carboxypeptidase A4##NM_001163446|CPA4|51200|carboxypeptidase A4##NM_016352|CPA4|51200|carboxypeptidase A4##BC052289|CPA4|51200|carboxypeptidase A4##AK310933|CPA4|51200|carboxypeptidase A4##AK298553|CPA4|51200|carboxypeptidase A4##AK298550|CPA4|51200|carboxypeptidase A4##AK299023|CPA4|51200|carboxypeptidase A4##AY358699|CPA4|51200|carboxypeptidase A4##AF095719|CPA4|51200|carboxypeptidase A4##HQ448429|CPA4|51200|carboxypeptidase A4##NM_001127441|CPA5|93979|carboxypeptidase A5##NM_001127442|CPA5|93979|carboxypeptidase A5##NM_080385|CPA5|93979|carboxypeptidase A5##AK093288|CPA5|93979|carboxypeptidase A5##AK315256|CPA5|93979|carboxypeptidase A5##BC039362|CPA5|93979|carboxypeptidase A5##AY155230|CPA5|93979|carboxypeptidase A5##BC053681|CPA5|93979|carboxypeptidase A5##BC042996|CPA5|93979|carboxypeptidase A5##AK131191|CPA5|93979|carboxypeptidase A5##AY155229|CPA5|93979|carboxypeptidase A5	0.446841	CTCF.p2:-7:0.379
chr17	75426275	75426397	reg1002690.p2	14.306	+	AB023208 NM_001113494 AJ312322	-54167	+	TSC_hg19_v1_chr17_+_75369418 AK304143	-56911	+	TSC_hg19_v1_chr17_+_75369236 AJ312319 NM_001113493	-57083	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	20309	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	20446	+	AK299828 TSC_hg19_v1_chr17_+_75447450	21053	+	AB023208|SEPT9|10801|septin 9##NM_001113494|SEPT9|10801|septin 9##AJ312322|SEPT9|10801|septin 9##AK304143|SEPT9|10801|septin 9##AJ312319|SEPT9|10801|septin 9##NM_001113493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9	0.981784	CTCF.p2:-1:0.982
chr2	224858460	224858601	reg1004373.p1	14.306	+	TSC_hg19_v1_chr2_+_224822174 NM_022915 AK022763 BC012058 AK024052 CR457293 CU680184	-36377	+	TSC_hg19_v1_chr2_-_224810053 BC065934 NM_020830 AJ310568	-48465	-	TSC_hg19_v1_chr2_-_224810031 BC021065	-48498	-	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	8098	-	AK295564 NM_001136530	44810	-	TSC_hg19_v1_chr2_-_224904004 BC015663 AK225823 AK297588 AK312499 NM_001136528 NM_006216	45640	-	NM_022915|MRPL44|65080|mitochondrial ribosomal protein L44##AK022763|MRPL44|65080|mitochondrial ribosomal protein L44##BC012058|MRPL44|65080|mitochondrial ribosomal protein L44##AK024052|MRPL44|65080|mitochondrial ribosomal protein L44##CR457293|MRPL44|65080|mitochondrial ribosomal protein L44##BC065934|WDFY1|57590|WD repeat and FYVE domain containing 1##NM_020830|WDFY1|57590|WD repeat and FYVE domain containing 1##AJ310568|WDFY1|57590|WD repeat and FYVE domain containing 1##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##BC015663|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK225823|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK297588|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK312499|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136528|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_006216|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	0.998915	CTCF.p2:0:0.999
chr4	55084073	55084209	reg1003866.p1	14.305	+	AB028838 EU596451 NM_133267	-117919	+	TSC_hg19_v1_chr4_-_54930773 AK312427 NM_012110	-153344	-	TSC_hg19_v1_chr4_-_54930764 AF159423 BC034691	-153406	-	NM_006206 TSC_hg19_v1_chr4_+_55095296	11139	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	11323	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	439993	+	AB028838|GSX2|170825|GS homeobox 2##EU596451|GSX2|170825|GS homeobox 2##NM_133267|GSX2|170825|GS homeobox 2##AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2##AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2##BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	0.880943	CTCF.p2:11:0.881
chr11	67723280	67723406	reg1004111.p1	14.304	+	TSC_hg19_v1_chr11_-_67572800 BC063712 BC110365	-150591	-	TSC_hg19_v1_chr11_-_67450557 AB055770	-272797	-	BC007685 NM_001031615	-274659	-	TSC_hg19_v1_chr11_-_67771527 BC101568 BC105104 BC025669 AJ422142 AJ271326 BC092472 BC033623 NM_030930	48224	-	TSC_hg19_v1_chr11_+_67776039 EF411198 NM_001161473	52688	+	TSC_hg19_v1_chr11_+_67777790 NM_000694 NM_001030010 BC002553 AK291505	54447	+	BC063712|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC110365|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##AB055770|RPL37|6167|ribosomal protein L37##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC101568|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC105104|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC025669|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ422142|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ271326|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC092472|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC033623|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##NM_030930|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##EF411198|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001161473|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_000694|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001030010|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##BC002553|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##AK291505|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1	0.999894	CTCF.p2:-7:1.000
chr12	103163467	103163590	reg1002958.p2	14.303	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-289146	-	M11568 TSC_hg19_v1_chr12_-_102874344	-289186	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-289206	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	147438	-	TSC_hg19_v1_chr12_-_103311062 BC026251	147535	-	L47726 NM_000277 U49897	147852	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.783759	CTCF.p2:5:0.784
chr1	25729576	25729698	reg1003735.p1	14.303	+	TSC_hg19_v1_chr1_+_25664821 NM_014313 AK311092 AF087880 AL136627 AK299180 AK311355 AK312588 AY358650 AY071927 BC007341 BC066908 AF081282	-64803	+	AK297151 NM_001127691 NM_016124 X63094 BC139922 AF510069 AF510070 AF312679 Z97026 DQ451878 X63097 AB018966 AB018967 AB018968 AB018969 AB037270 AB046420 AB049754 AF037626 AF177938 AF187846 AJ704215 AM183924 AY449381 AY449382 AY449383 AY449384 AY449385 AY751491 AY751492 AY751493 AY751494 AY751495 AY751496 FR745438 FR745439 FR745440 FR745441 JF436967 L08429 S57971 S70174 S73913 S78509 S82449 EU557240 EU557241 EU661905 EU661906	-130645	+	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	-155664	-	AB018644 AB018645 AB030388 AB049753 AF056965 AF177938 AM295498 AM295506 DQ178642 DQ266353 DQ266400 DQ322275 FR691748 FR691750 GU474431 GU563377 GU810838 HE572747 JF436968 S57967 X63096 X63095 AY603478 X63098 Z97026 BC075081 M34015 AF510065 AF510066 AF510067 AF510068 X54534 NM_020485 NM_138616 NM_138617 NM_138618 BC139905	17703	-	TSC_hg19_v1_chr1_+_25757387 AK311472 NM_018202 AY845015 BC007687 AK001609 AY845035 AY845036 BC032427 BC020801	27848	+	TSC_hg19_v1_chr1_+_25870097 AK091219 NM_015627	140454	+	NM_014313|TMEM50A|23585|transmembrane protein 50A##AK311092|TMEM50A|23585|transmembrane protein 50A##AF087880|TMEM50A|23585|transmembrane protein 50A##AL136627|TMEM50A|23585|transmembrane protein 50A##AK299180|TMEM50A|23585|transmembrane protein 50A##AK311355|TMEM50A|23585|transmembrane protein 50A##AK312588|TMEM50A|23585|transmembrane protein 50A##AY358650|TMEM50A|23585|transmembrane protein 50A##AY071927|TMEM50A|23585|transmembrane protein 50A##BC007341|TMEM50A|23585|transmembrane protein 50A##BC066908|TMEM50A|23585|transmembrane protein 50A##AF081282|TMEM50A|23585|transmembrane protein 50A##AK297151|RHD|6007|Rh blood group, D antigen##NM_001127691|RHD|6007|Rh blood group, D antigen##NM_016124|RHD|6007|Rh blood group, D antigen##X63094|RHD|6007|Rh blood group, D antigen##BC139922|RHD|6007|Rh blood group, D antigen##AF510069|RHD|6007|Rh blood group, D antigen##AF510070|RHD|6007|Rh blood group, D antigen##AF312679|RHD|6007|Rh blood group, D antigen##Z97026|RHD|6007|Rh blood group, D antigen##DQ451878|RHD|6007|Rh blood group, D antigen##X63097|RHD|6007|Rh blood group, D antigen##AB018966|RHD|6007|Rh blood group, D antigen##AB018967|RHD|6007|Rh blood group, D antigen##AB018968|RHD|6007|Rh blood group, D antigen##AB018969|RHD|6007|Rh blood group, D antigen##AB037270|RHD|6007|Rh blood group, D antigen##AB046420|RHD|6007|Rh blood group, D antigen##AB049754|RHD|6007|Rh blood group, D antigen##AF037626|RHD|6007|Rh blood group, D antigen##AF177938|RHD|6007|Rh blood group, D antigen##AF187846|RHD|6007|Rh blood group, D antigen##AJ704215|RHD|6007|Rh blood group, D antigen##AM183924|RHD|6007|Rh blood group, D antigen##AY449381|RHD|6007|Rh blood group, D antigen##AY449382|RHD|6007|Rh blood group, D antigen##AY449383|RHD|6007|Rh blood group, D antigen##AY449384|RHD|6007|Rh blood group, D antigen##AY449385|RHD|6007|Rh blood group, D antigen##AY751491|RHD|6007|Rh blood group, D antigen##AY751492|RHD|6007|Rh blood group, D antigen##AY751493|RHD|6007|Rh blood group, D antigen##AY751494|RHD|6007|Rh blood group, D antigen##AY751495|RHD|6007|Rh blood group, D antigen##AY751496|RHD|6007|Rh blood group, D antigen##FR745438|RHD|6007|Rh blood group, D antigen##FR745439|RHD|6007|Rh blood group, D antigen##FR745440|RHD|6007|Rh blood group, D antigen##FR745441|RHD|6007|Rh blood group, D antigen##L08429|RHD|6007|Rh blood group, D antigen##S57971|RHD|6007|Rh blood group, D antigen##S70174|RHD|6007|Rh blood group, D antigen##S73913|RHD|6007|Rh blood group, D antigen##S78509|RHD|6007|Rh blood group, D antigen##S82449|RHD|6007|Rh blood group, D antigen##EU557240|RHD|6007|Rh blood group, D antigen##EU557241|RHD|6007|Rh blood group, D antigen##EU661905|RHD|6007|Rh blood group, D antigen##EU661906|RHD|6007|Rh blood group, D antigen##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63##AB018644|RHCE|6006|Rh blood group, CcEe antigens##AB018645|RHCE|6006|Rh blood group, CcEe antigens##AB030388|RHCE|6006|Rh blood group, CcEe antigens##AB049753|RHCE|6006|Rh blood group, CcEe antigens##AF056965|RHCE|6006|Rh blood group, CcEe antigens##AF177938|RHD|6007|Rh blood group, D antigen##AM295498|RHCE|6006|Rh blood group, CcEe antigens##AM295506|RHCE|6006|Rh blood group, CcEe antigens##DQ178642|RHCE|6006|Rh blood group, CcEe antigens##DQ266353|RHCE|6006|Rh blood group, CcEe antigens##DQ266400|RHCE|6006|Rh blood group, CcEe antigens##DQ322275|RHCE|6006|Rh blood group, CcEe antigens##FR691748|RHCE|6006|Rh blood group, CcEe antigens##FR691750|RHCE|6006|Rh blood group, CcEe antigens##GU474431|RHCE|6006|Rh blood group, CcEe antigens##GU563377|RHCE|6006|Rh blood group, CcEe antigens##GU810838|RHCE|6006|Rh blood group, CcEe antigens##S57967|RHCE|6006|Rh blood group, CcEe antigens##X63096|RHCE|6006|Rh blood group, CcEe antigens##X63095|RHCE|6006|Rh blood group, CcEe antigens##AY603478|RHCE|6006|Rh blood group, CcEe antigens##X63098|RHCE|6006|Rh blood group, CcEe antigens##Z97026|RHD|6007|Rh blood group, D antigen##BC075081|RHCE|6006|Rh blood group, CcEe antigens##M34015|RHCE|6006|Rh blood group, CcEe antigens##AF510065|RHCE|6006|Rh blood group, CcEe antigens##AF510066|RHCE|6006|Rh blood group, CcEe antigens##AF510067|RHCE|6006|Rh blood group, CcEe antigens##AF510068|RHCE|6006|Rh blood group, CcEe antigens##X54534|RHCE|6006|Rh blood group, CcEe antigens##NM_020485|RHCE|6006|Rh blood group, CcEe antigens##NM_138616|RHCE|6006|Rh blood group, CcEe antigens##NM_138617|RHCE|6006|Rh blood group, CcEe antigens##NM_138618|RHCE|6006|Rh blood group, CcEe antigens##BC139905|RHCE|6006|Rh blood group, CcEe antigens##AK311472|TMEM57|55219|transmembrane protein 57##NM_018202|TMEM57|55219|transmembrane protein 57##AY845015|TMEM57|55219|transmembrane protein 57##BC007687|TMEM57|55219|transmembrane protein 57##AK001609|TMEM57|55219|transmembrane protein 57##AY845035|TMEM57|55219|transmembrane protein 57##AY845036|TMEM57|55219|transmembrane protein 57##BC032427|TMEM57|55219|transmembrane protein 57##BC020801|TMEM57|55219|transmembrane protein 57##AK091219|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##NM_015627|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1	0.53354	CTCF.p2:-15:0.534
chr2	178199818	178199950	reg1002333.p1	14.303	+	AK314816 NM_006164	-70026	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	-70508	-	AK311688 NM_001145412 NM_001145413	-71313	-	TSC_hg19_v1_chr2_-_178257411 BC093095 AL833088 AK126517	57523	-	AK309714 TSC_hg19_v1_chr2_+_178257487 NM_003659	57545	+	TSC_hg19_v1_chr2_+_178257497 AK225439 AK314259 Y09443 BC141820 AY544121 AK296239 AK316240	57745	+	AK314816|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_006164|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##AL833088|LOC100130691|100130691|uncharacterized LOC100130691##AK126517|LOC100130691|100130691|uncharacterized LOC100130691##AK309714|AGPS|8540|alkylglycerone phosphate synthase##NM_003659|AGPS|8540|alkylglycerone phosphate synthase##AK314259|AGPS|8540|alkylglycerone phosphate synthase##Y09443|AGPS|8540|alkylglycerone phosphate synthase##BC141820|AGPS|8540|alkylglycerone phosphate synthase##AY544121|AGPS|8540|alkylglycerone phosphate synthase##AK296239|AGPS|8540|alkylglycerone phosphate synthase##AK316240|AGPS|8540|alkylglycerone phosphate synthase	0.999524	CTCF.p2:-12:1.000
chr11	44578373	44578493	reg1000854.p1	14.302	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-246757	-	NM_000401 BX648142	-460674	+	BC068545 TSC_hg19_v1_chr11_+_44117272 U72263 BC013050	-461162	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	8732	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	8794	+	NM_130783	207542	+	AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_000401|EXT2|2132|exostosin 2##BX648142|EXT2|2132|exostosin 2##BC068545|EXT2|2132|exostosin 2##U72263|EXT2|2132|exostosin 2##BC013050|EXT2|2132|exostosin 2##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_130783|TSPAN18|90139|tetraspanin 18	0.995154	CTCF.p2:-52:0.995
chr20	52556544	52556679	reg1002424.p2	14.300	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-345812	-	AF041259 NM_006526	-356976	-	AK302570 NM_001193421	-754790	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	130451	-	AK315220 NM_003657	130692	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	233909	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.125607	
chr3	126398208	126398331	reg1004091.p1	14.300	+	TSC_hg19_v1_chr3_-_126373968 NM_001173513 NM_052883	-24293	-	TSC_hg19_v1_chr3_-_126373947 AK299502 BC030028 BC050032	-24355	-	AB113648 NM_001039783	-70872	-	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	24808	+	AB385178 NM_032242 X87832	309171	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	513725	+	NM_001173513|TXNRD3|114112|thioredoxin reductase 3##NM_052883|TXNRD3|114112|thioredoxin reductase 3##AK299502|TXNRD3|114112|thioredoxin reductase 3##BC030028|TXNRD3|114112|thioredoxin reductase 3##BC050032|TXNRD3|114112|thioredoxin reductase 3##AB113648|TXNRD3NB|645840|thioredoxin reductase 3 neighbor##NM_001039783|TXNRD3NB|645840|thioredoxin reductase 3 neighbor##AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56	0.965547	CTCF.p2:-7:0.966
chr3	17882840	17882959	reg1002977.p1	14.300	+	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-98732	-	D86965 NM_014744	-100501	-	AK310539 NM_001134381	-141388	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	583898	-	BC001744 NM_001131010	597334	-	AK295633 AY053503 NM_144633 AB209053 AK309034	1307105	+	NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	0.204721	CTCF.p2:10:0.205
chr16	70404109	70404250	reg1004546.p1	14.299	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-23351	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-71031	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-71103	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	68802	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	84320	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	98661	+	AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##AK096727|FUK|197258|fucokinase	0.977983	CTCF.p2:0:0.978
chr5	137404573	137404697	reg1004102.p1	14.299	+	TSC_hg19_v1_chr5_-_137368794 NM_001101800 NM_001101801 NM_016603	-35845	-	TSC_hg19_v1_chr5_-_137368776 AK314224	-35859	-	TSC_hg19_v1_chr5_-_137368770 BC041335 BC048965	-35864	-	BC144497 AY009402 BC144001 AB057725 NM_058244 AB590697	15044	+	U90450 AK312181 AF067724 BC026182 NM_003551	70468	-	BC008039 BC008076 AB384833 AB209079 TSC_hg19_v1_chr5_-_137514319 AK310380 AK289951 AK293621 AK297756 AK299694 AK312333 AK225928 AL136823 NM_001164326 NM_006696 NM_139199	109698	-	NM_001101800|FAM13B|51306|family with sequence similarity 13, member B##NM_001101801|FAM13B|51306|family with sequence similarity 13, member B##NM_016603|FAM13B|51306|family with sequence similarity 13, member B##AK314224|FAM13B|51306|family with sequence similarity 13, member B##BC041335|FAM13B|51306|family with sequence similarity 13, member B##BC048965|FAM13B|51306|family with sequence similarity 13, member B##BC144497|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AY009402|WNT8A|7478|wingless-type MMTV integration site family, member 8A##BC144001|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AB057725|WNT8A|7478|wingless-type MMTV integration site family, member 8A##NM_058244|WNT8A|7478|wingless-type MMTV integration site family, member 8A##U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC008039|BRD8|10902|bromodomain containing 8##BC008076|BRD8|10902|bromodomain containing 8##AB209079|BRD8|10902|bromodomain containing 8##AK310380|BRD8|10902|bromodomain containing 8##AK289951|BRD8|10902|bromodomain containing 8##AK293621|BRD8|10902|bromodomain containing 8##AK297756|BRD8|10902|bromodomain containing 8##AK312333|BRD8|10902|bromodomain containing 8##AK225928|BRD8|10902|bromodomain containing 8##AL136823|BRD8|10902|bromodomain containing 8##NM_001164326|BRD8|10902|bromodomain containing 8##NM_006696|BRD8|10902|bromodomain containing 8##NM_139199|BRD8|10902|bromodomain containing 8	0.953244	CTCF.p2:9:0.953
chr20	19186705	19186828	reg1003942.p1	14.298	+	NM_001242671	-375928	-	AF418568 AF418570 AX721297 NM_178483 AK130970 AY248902 BC105121 BC112024	-392368	+	TSC_hg19_v1_chr20_+_18568661 NM_080820 BC045167 AK074304 BC100923 BC100924 BC100925 BC100926 AK291440 AF332356 CU692252	-618116	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	6519	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	6687	+	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	680377	+	NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AF418568|C20orf79|140856|chromosome 20 open reading frame 79##AF418570|C20orf79|140856|chromosome 20 open reading frame 79##NM_178483|C20orf79|140856|chromosome 20 open reading frame 79##AK130970|C20orf79|140856|chromosome 20 open reading frame 79##AY248902|C20orf79|140856|chromosome 20 open reading frame 79##BC105121|C20orf79|140856|chromosome 20 open reading frame 79##BC112024|C20orf79|140856|chromosome 20 open reading frame 79##NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2	0.999046	CTCF.p2:-2:0.999
chr2	97778117	97778274	reg1002946.p1	14.298	+	TSC_hg19_v1_chr2_-_97760578 AK295056 BC064511 NM_199336	-17604	-	NM_001122646	-125895	-	BC038583 BC051379 NM_016490	-214346	-	AY358571 NM_001164315 BX647769 TSC_hg19_v1_chr2_+_97779310 AK304740 AK316541 AK307629 BC046186 BC128262 BC128517 CU692324	1158	+	CU687166 TSC_hg19_v1_chr2_-_98206176	427967	-	BC071771 BC017427 TSC_hg19_v1_chr2_-_98206339 AK074570 NM_025190	428145	-	AK295056|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##BC064511|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##NM_199336|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##NM_001122646|FAM178B|51252|family with sequence similarity 178, member B##BC038583|FAM178B|51252|family with sequence similarity 178, member B##BC051379|FAM178B|51252|family with sequence similarity 178, member B##NM_016490|FAM178B|51252|family with sequence similarity 178, member B##AY358571|ANKRD36|375248|ankyrin repeat domain 36##NM_001164315|ANKRD36|375248|ankyrin repeat domain 36##BX647769|ANKRD36|375248|ankyrin repeat domain 36##AK304740|ANKRD36|375248|ankyrin repeat domain 36##AK316541|ANKRD36|375248|ankyrin repeat domain 36##AK307629|ANKRD36|375248|ankyrin repeat domain 36##BC046186|ANKRD36|375248|ankyrin repeat domain 36##BC128262|ANKRD36|375248|ankyrin repeat domain 36##BC128517|ANKRD36|375248|ankyrin repeat domain 36##BC071771|ANKRD36B|57730|ankyrin repeat domain 36B##BC017427|ANKRD36B|57730|ankyrin repeat domain 36B##AK074570|ANKRD36B|57730|ankyrin repeat domain 36B##NM_025190|ANKRD36B|57730|ankyrin repeat domain 36B	1.620937	CTCF.p2:-24:0.990	CTCF.p2:43:0.631
chr18	19536136	19536259	reg1003955.p1	14.297	+	CR749635 TSC_hg19_v1_chr18_+_19353654	-182550	+	AY149908 BC110581 BC110582 NM_020774	-214653	+	TSC_hg19_v1_chr18_+_19321288 AY147849	-214914	+	AK123079 TSC_hg19_v1_chr18_-_19749029	212789	-	X95701 BC027891 NM_005257 TSC_hg19_v1_chr18_+_19749549	213279	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	461628	-	CR749635|MIB1|57534|mindbomb homolog 1 (Drosophila)##AY149908|MIB1|57534|mindbomb homolog 1 (Drosophila)##BC110581|MIB1|57534|mindbomb homolog 1 (Drosophila)##BC110582|MIB1|57534|mindbomb homolog 1 (Drosophila)##NM_020774|MIB1|57534|mindbomb homolog 1 (Drosophila)##AY147849|MIB1|57534|mindbomb homolog 1 (Drosophila)##AK123079|LOC100128893|100128893|uncharacterized LOC100128893##X95701|GATA6|2627|GATA binding protein 6##BC027891|GATA6|2627|GATA binding protein 6##NM_005257|GATA6|2627|GATA binding protein 6##HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	0.999502	CTCF.p2:-2:1.000
chr4	178171384	178171507	reg1003283.p1	14.297	+	AK313879 BC035212 U58111 X94216 U43142 BC063685 NM_005429 TSC_hg19_v1_chr4_-_177713956	-457635	-	TSC_hg19_v1_chr4_-_177241652 AK096223	-929814	-	TSC_hg19_v1_chr4_+_177241122 AK026302 AL136660 AY359044 BC043490 BC053883 BC047290 CU690386 EU831652 EU831735	-930277	+	TSC_hg19_v1_chr4_+_178231006 NM_018248	59548	+	TSC_hg19_v1_chr4_+_178231027 AK001720 BC025954 AK307692 AB079071	59615	+	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	192096	-	AK313879|VEGFC|7424|vascular endothelial growth factor C##BC035212|VEGFC|7424|vascular endothelial growth factor C##U58111|VEGFC|7424|vascular endothelial growth factor C##X94216|VEGFC|7424|vascular endothelial growth factor C##U43142|VEGFC|7424|vascular endothelial growth factor C##BC063685|VEGFC|7424|vascular endothelial growth factor C##NM_005429|VEGFC|7424|vascular endothelial growth factor C##AK026302|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AL136660|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AY359044|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC043490|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC053883|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC047290|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831652|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831735|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##NM_018248|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK001720|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##BC025954|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK307692|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AB079071|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase	0.0	
chr6	41431178	41431307	reg1003868.p1	14.297	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-127676	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-176818	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-235174	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	82917	+	TSC_hg19_v1_chr6_+_41514342 BC052803	83095	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	174980	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	0.273638	CTCF.p2:-15:0.274
chrX	150849452	150849582	reg1004451.p1	14.297	+	NM_173493 AK097552 BC040301 AY270020	-117414	+	TSC_hg19_v1_chrX_+_150565705 BC103701 BC103702 BC105693 BC105694 AL833596 BC110800 AM392666 AB528749	-283782	+	TSC_hg19_v1_chrX_+_150565686 AK096835	-283837	+	NM_024082	14212	+	BC022064 AF249872 NM_033085 AK057369 AB528542 AM393498 CU692478 DQ892418 DQ895632	35031	+	AK128186 NM_005140 BC126302 BC126304	53765	+	NM_173493|PASD1|139135|PAS domain containing 1##AK097552|PASD1|139135|PAS domain containing 1##BC040301|PASD1|139135|PAS domain containing 1##AY270020|PASD1|139135|PAS domain containing 1##BC103701|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC103702|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC105693|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC105694|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AL833596|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC110800|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AM392666|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AK096835|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)##BC022064|FATE1|89885|fetal and adult testis expressed 1##AF249872|FATE1|89885|fetal and adult testis expressed 1##NM_033085|FATE1|89885|fetal and adult testis expressed 1##AM393498|FATE1|89885|fetal and adult testis expressed 1##DQ892418|FATE1|89885|fetal and adult testis expressed 1##DQ895632|FATE1|89885|fetal and adult testis expressed 1##AK128186|CNGA2|1260|cyclic nucleotide gated channel alpha 2##NM_005140|CNGA2|1260|cyclic nucleotide gated channel alpha 2##BC126302|CNGA2|1260|cyclic nucleotide gated channel alpha 2##BC126304|CNGA2|1260|cyclic nucleotide gated channel alpha 2	0.146074	
chr1	147843745	147843897	reg1004023.p1	14.296	+	AL832622 TSC_hg19_v1_chr1_-_147624600	-219221	-	TSC_hg19_v1_chr1_-_147624593 BC136292 NM_183372	-219305	-	BX648497 TSC_hg19_v1_chr1_-_147624379	-219476	-	BC099898 BC071624 AK097058 AK310056 TSC_hg19_v1_chr1_-_147931936 AK310186 AK309393	88107	-	BC130376 BC130378 AB084917 NM_001143883 NM_178230	111576	-	AL117237 NM_015383 BC094705	182033	-	AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##BX648497|NBPF11|200030|neuroblastoma breakpoint family, member 11##BC071624|FLJ39739|388685|uncharacterized FLJ39739##AK097058|FLJ39739|388685|uncharacterized FLJ39739##AK310056|FLJ39739|388685|uncharacterized FLJ39739##AK310186|FLJ39739|388685|uncharacterized FLJ39739##AK309393|FLJ39739|388685|uncharacterized FLJ39739##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##AL117237|NBPF14|25832|neuroblastoma breakpoint family, member 14##NM_015383|NBPF14|25832|neuroblastoma breakpoint family, member 14##BC094705|NBPF1|55672|neuroblastoma breakpoint family, member 1	0.751704	CTCF.p2:-15:0.752
chr5	154029880	154030001	reg1003587.p1	14.296	+	TSC_hg19_v1_chr5_-_153857823 AF061756 NM_004821	-172118	-	TSC_hg19_v1_chr5_-_153857790 BC021190	-172152	-	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	-204330	+	BC001460 NM_015315 CU674716	62533	+	TSC_hg19_v1_chr5_+_154134891 AB018274	104955	+	TSC_hg19_v1_chr5_+_154135038 AK091465 AX747001	105141	+	AF061756|HAND1|9421|heart and neural crest derivatives expressed 1##NM_004821|HAND1|9421|heart and neural crest derivatives expressed 1##BC021190|HAND1|9421|heart and neural crest derivatives expressed 1##AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like##BC001460|LARP1|23367|La ribonucleoprotein domain family, member 1##NM_015315|LARP1|23367|La ribonucleoprotein domain family, member 1##AB018274|LARP1|23367|La ribonucleoprotein domain family, member 1##AK091465|LARP1|23367|La ribonucleoprotein domain family, member 1	0.999751	CTCF.p2:-8:1.000
chr9	140013283	140013388	reg1001763.p1	14.296	+	NM_013379 TSC_hg19_v1_chr9_-_140009194	-4141	-	AK292112 TSC_hg19_v1_chr9_-_140009178	-4160	-	BC011907 BC016961 DQ891460 DQ894637 TSC_hg19_v1_chr9_-_140009169	-4166	-	TSC_hg19_v1_chr9_-_140024189 BC018639	10900	-	TSC_hg19_v1_chr9_+_140032795 L13266	19472	+	TSC_hg19_v1_chr9_+_140033607 NM_000832 NM_001185090 NM_001185091 NM_007327 NM_021569 AB208999 D13515 AB208918 L05666 AB590080 L13268	20443	+	NM_013379|DPP7|29952|dipeptidyl-peptidase 7##AK292112|DPP7|29952|dipeptidyl-peptidase 7##BC011907|DPP7|29952|dipeptidyl-peptidase 7##BC016961|DPP7|29952|dipeptidyl-peptidase 7##DQ891460|DPP7|29952|dipeptidyl-peptidase 7##DQ894637|DPP7|29952|dipeptidyl-peptidase 7##L13266|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_000832|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_001185090|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_001185091|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_007327|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_021569|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##AB208999|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##D13515|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##AB208918|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##L05666|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##L13268|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1	0.830065	CTCF.p2:-24:0.830
chr19	2156130	2156248	reg1002403.p1	14.294	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-4636	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	-4647	-	CU679595 AB384738 BC005142 TSC_hg19_v1_chr19_-_2151519	-4764	-	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	7949	+	BC021037 TSC_hg19_v1_chr19_+_2222534	66285	+	BC032803 TSC_hg19_v1_chr19_+_2232168	75932	+	NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC005142|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	0.900406	CTCF.p2:-27:0.900
chr21	40510192	40510309	reg1003331.p1	14.294	+	TSC_hg19_v1_chr21_+_40177852 NM_005239 BC042954 AK315563 BC017040	-332373	+	J04102 TSC_hg19_v1_chr21_+_40177830	-332453	+	AY204740 AY204741 AY204742 AY204743 NM_001243432 TSC_hg19_v1_chr21_-_40033677 AK297807 NM_001136154 NM_004449	-476590	-	CU678538 AB451468 AF417108 AY463963 CR541821 CR541852 DQ892311 DQ895511 TSC_hg19_v1_chr21_-_40555337	45072	-	TSC_hg19_v1_chr21_-_40555341 AK315406	45090	-	TSC_hg19_v1_chr21_-_40555343 BC010424 BC003619 BC011755 BC012809 AJ006291 AK001455 AK308614 NM_003720 NM_203433	45151	-	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##J04102|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AY204740|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204741|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204742|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204743|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243432|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK297807|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136154|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_004449|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AB451468|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AF417108|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AY463963|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541821|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541852|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ892311|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ895511|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AK315406|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC010424|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC003619|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC011755|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC012809|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AJ006291|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AK001455|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AK308614|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##NM_003720|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##NM_203433|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1	0.497579	CTCF.p2:11:0.498
chr3	56736662	56736780	reg1002669.p1	14.291	+	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-19514	-	BC029354 NM_015224	-38648	-	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	-145475	+	AK293864 AB209661 NM_001128616	72948	-	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	99190	-	AY221117 NM_181727 BC126274 BC136498	357782	+	BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##BC029354|FAM208A|23272|family with sequence similarity 208, member A##NM_015224|FAM208A|23272|family with sequence similarity 208, member A##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12	0.998399	CTCF.p2:-2:0.998
chr12	111736773	111736886	reg1002848.p1	14.290	+	BC151245 NM_015267 AB006631 AF271236	-264957	+	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	-378451	-	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-452026	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	70017	-	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	70081	-	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	106920	+	BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3	0.999638	CTCF.p2:-8:1.000
chr18	47883714	47883845	reg1002971.p3	14.289	+	BX647189 NM_001101654 NM_014593	-69088	-	AB031069 AF149758 AK314886 TSC_hg19_v1_chr18_-_47814205 AK294645	-69572	-	TSC_hg19_v1_chr18_-_47814047 BC002504 BC014940	-69743	-	TSC_hg19_v1_chr18_+_47901415 NM_001039535 NM_145060 BC015706 AK313968 AK303464	17618	+	TSC_hg19_v1_chr18_+_48086463 BC050299 NM_002747 AK293818 BC040493 AK295058	202718	+	AB042647 AK054702 AK295666 NM_001127175 NM_001127176 NM_031939	462586	-	BX647189|CXXC1|30827|CXXC finger protein 1##NM_001101654|CXXC1|30827|CXXC finger protein 1##NM_014593|CXXC1|30827|CXXC finger protein 1##AB031069|CXXC1|30827|CXXC finger protein 1##AF149758|CXXC1|30827|CXXC finger protein 1##AK314886|CXXC1|30827|CXXC finger protein 1##AK294645|CXXC1|30827|CXXC finger protein 1##BC002504|CXXC1|30827|CXXC finger protein 1##BC014940|CXXC1|30827|CXXC finger protein 1##NM_001039535|SKA1|220134|spindle and kinetochore associated complex subunit 1##NM_145060|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC015706|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK313968|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK303464|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC050299|MAPK4|5596|mitogen-activated protein kinase 4##NM_002747|MAPK4|5596|mitogen-activated protein kinase 4##AK293818|MAPK4|5596|mitogen-activated protein kinase 4##BC040493|MAPK4|5596|mitogen-activated protein kinase 4##AK295058|MAPK4|5596|mitogen-activated protein kinase 4##AB042647|MRO|83876|maestro##AK054702|MRO|83876|maestro##AK295666|MRO|83876|maestro##NM_001127175|MRO|83876|maestro##NM_001127176|MRO|83876|maestro##NM_031939|MRO|83876|maestro	0.997998	CTCF.p2:19:0.998
chrX	49680367	49680478	reg1003172.p1	14.288	+	NM_001145073	-35953	+	NM_007003 AK312039 AF275258 AJ005894 AK092503 AX747575	-86495	+	BC004861 AF058989 NM_003785	-219841	-	TSC_hg19_v1_chrX_+_49687274 AK092049 NM_001127898 NM_001127899 AK056560	6824	+	NM_000084 AK308089 TSC_hg19_v1_chrX_+_49832243 AK290940	151823	+	NM_139289 BC033007 BC070150 TSC_hg19_v1_chrX_-_49965024	284591	-	NM_001145073|USP27X|389856|ubiquitin specific peptidase 27, X-linked##NM_007003|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK312039|PAGE4|9506|P antigen family, member 4 (prostate associated)##AF275258|PAGE4|9506|P antigen family, member 4 (prostate associated)##AJ005894|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK092503|PAGE4|9506|P antigen family, member 4 (prostate associated)##BC004861|PAGE1|8712|P antigen family, member 1 (prostate associated)##AF058989|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_003785|PAGE1|8712|P antigen family, member 1 (prostate associated)##AK092049|CLCN5|1184|chloride channel 5##NM_001127898|CLCN5|1184|chloride channel 5##NM_001127899|CLCN5|1184|chloride channel 5##AK056560|CLCN5|1184|chloride channel 5##NM_000084|CLCN5|1184|chloride channel 5##AK308089|CLCN5|1184|chloride channel 5##AK290940|CLCN5|1184|chloride channel 5##NM_139289|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC033007|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC070150|AKAP4|8852|A kinase (PRKA) anchor protein 4	0.99264	CTCF.p2:3:0.993
chr22	30881489	30881608	reg1002657.p2	14.287	+	AY158086 BC069641 BC101001 BC101002 BC101003 BC101004 AK298079 AK131358 AY240872 NM_174975	-13560	-	NM_001003704 NM_016498 AF151076 AF060924 BC030989 AK026104 BC009300 TSC_hg19_v1_chr22_+_30821776 BC001608 BC014446 CR456345 BC046132 AB528187 CU013056 CU013344	-59809	+	NM_001204204 NM_012429 NM_033382 AL096881 TSC_hg19_v1_chr22_+_30793006 AK223587 BC048337 AK314390 AK091402 BC058915 AB033012 CR456571 AK303751 AK296540 CU013170 CU013458	-88533	+	AY158085 FJ824055 BC139912 BC136358 BC136359 AK093448 AK092002 AK093418 AX747303 AX748114 NM_001161368 NM_174977	20099	-	NM_001193336	61120	-	D88667 NM_004861	79327	-	AY158086|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC069641|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101001|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101002|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101003|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101004|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AK298079|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AK131358|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AY240872|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##NM_174975|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##NM_001003704|MTFP1|51537|mitochondrial fission process 1##NM_016498|MTFP1|51537|mitochondrial fission process 1##AF151076|MTFP1|51537|mitochondrial fission process 1##AF060924|MTFP1|51537|mitochondrial fission process 1##BC030989|MTFP1|51537|mitochondrial fission process 1##AK026104|MTFP1|51537|mitochondrial fission process 1##BC009300|MTFP1|51537|mitochondrial fission process 1##BC001608|MTFP1|51537|mitochondrial fission process 1##BC014446|MTFP1|51537|mitochondrial fission process 1##CR456345|MTFP1|51537|mitochondrial fission process 1##BC046132|MTFP1|51537|mitochondrial fission process 1##NM_001204204|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_012429|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_033382|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AL096881|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK223587|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##BC048337|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK314390|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK091402|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##BC058915|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AB033012|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CR456571|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK303751|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK296540|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CU013170|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CU013458|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AY158085|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##FJ824055|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##BC139912|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##BC136358|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##BC136359|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##AK093448|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##AK092002|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##AK093418|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##NM_001161368|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##NM_174977|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##NM_001193336|SEC14L6|730005|SEC14-like 6 (S. cerevisiae)##D88667|GAL3ST1|9514|galactose-3-O-sulfotransferase 1##NM_004861|GAL3ST1|9514|galactose-3-O-sulfotransferase 1	0.999781	CTCF.p2:4:1.000
chr1	16335642	16335765	reg1002816.p1	14.286	+	AK127425 BC017946 NM_178840 CU676116	-4940	+	TSC_hg19_v1_chr1_-_16302597 BC126163 BC143965 BC143968 Y09723 AK302610 AK301896 AK309081 AK311083 AK315201 AK303823 AK299820 AK223618 AK294796 NM_001242884 NM_003443	-33233	-	TSC_hg19_v1_chr1_+_16259065 BC172907	-76592	+	TSC_hg19_v1_chr1_-_16344539 DQ892716 DQ895966 EU176383 EU831930 EU832025 AL832181 AF155908 AJ243191 CR749298 BX537990 AK075151 AK095911 CR749419	8810	-	AK057295 NM_014424	9581	-	BC053869 NM_001042704 NM_004070 AK298285 AK225550 AK290814 S80315	12750	+	AK127425|C1orf64|149563|chromosome 1 open reading frame 64##BC017946|C1orf64|149563|chromosome 1 open reading frame 64##NM_178840|C1orf64|149563|chromosome 1 open reading frame 64##BC126163|ZBTB17|7709|zinc finger and BTB domain containing 17##BC143965|ZBTB17|7709|zinc finger and BTB domain containing 17##BC143968|ZBTB17|7709|zinc finger and BTB domain containing 17##Y09723|ZBTB17|7709|zinc finger and BTB domain containing 17##AK302610|ZBTB17|7709|zinc finger and BTB domain containing 17##AK301896|ZBTB17|7709|zinc finger and BTB domain containing 17##AK309081|ZBTB17|7709|zinc finger and BTB domain containing 17##AK311083|ZBTB17|7709|zinc finger and BTB domain containing 17##AK315201|ZBTB17|7709|zinc finger and BTB domain containing 17##AK303823|ZBTB17|7709|zinc finger and BTB domain containing 17##AK299820|ZBTB17|7709|zinc finger and BTB domain containing 17##AK223618|ZBTB17|7709|zinc finger and BTB domain containing 17##AK294796|ZBTB17|7709|zinc finger and BTB domain containing 17##NM_001242884|ZBTB17|7709|zinc finger and BTB domain containing 17##NM_003443|ZBTB17|7709|zinc finger and BTB domain containing 17##DQ892716|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##DQ895966|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU176383|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU831930|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU832025|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AL832181|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AF155908|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AJ243191|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##CR749298|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##BX537990|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK075151|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK095911|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##CR749419|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK057295|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##NM_014424|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##BC053869|CLCNKA|1187|chloride channel Ka##NM_001042704|CLCNKA|1187|chloride channel Ka##NM_004070|CLCNKA|1187|chloride channel Ka##AK298285|CLCNKA|1187|chloride channel Ka##AK225550|CLCNKA|1187|chloride channel Ka##AK290814|CLCNKA|1187|chloride channel Ka##S80315|CLCNKB|1188|chloride channel Kb	0.966582	CTCF.p2:-11:0.967
chr3	44240262	44240374	reg1002610.p2	14.284	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-507897	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-576805	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-576880	-	AK093476 AX748152 NM_001145030	43059	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	139312	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	139629	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.975362	CTCF.p2:2:0.975
chr9	91193516	91193643	reg1003994.p1	14.284	+	NM_001161625 NM_145283 BC022521	-43562	+	TSC_hg19_v1_chr9_+_91003988 AK315854	-189581	+	TSC_hg19_v1_chr9_+_91003366 NM_006717 BC013571 AL136719 AK092017 AX747313 AF087864 AF106682 AK290009	-190246	+	BC101432 BC101439 BC101440 BC101442 AK098532 NM_001100111	73460	-	AK094842 NM_001001938 NM_001142413 AK127854 BC144432 BC136895 AY333281	412264	+	TSC_hg19_v1_chr9_+_91606382 AK312798 BC060827 NM_005226	412791	+	NM_001161625|NXNL2|158046|nucleoredoxin-like 2##NM_145283|NXNL2|158046|nucleoredoxin-like 2##BC022521|NXNL2|158046|nucleoredoxin-like 2##AK315854|SPIN1|10927|spindlin 1##NM_006717|SPIN1|10927|spindlin 1##BC013571|SPIN1|10927|spindlin 1##AL136719|SPIN1|10927|spindlin 1##AK092017|SPIN1|10927|spindlin 1##AF087864|SPIN1|10927|spindlin 1##AF106682|SPIN1|10927|spindlin 1##AK290009|SPIN1|10927|spindlin 1##BC101432|LOC286238|286238|uncharacterized LOC286238##BC101439|LOC286238|286238|uncharacterized LOC286238##BC101440|LOC286238|286238|uncharacterized LOC286238##BC101442|LOC286238|286238|uncharacterized LOC286238##AK098532|LOC286238|286238|uncharacterized LOC286238##NM_001100111|LOC286238|286238|uncharacterized LOC286238##AK094842|C9orf47|286223|chromosome 9 open reading frame 47##NM_001001938|C9orf47|286223|chromosome 9 open reading frame 47##NM_001142413|C9orf47|286223|chromosome 9 open reading frame 47##AK127854|C9orf47|286223|chromosome 9 open reading frame 47##BC144432|C9orf47|286223|chromosome 9 open reading frame 47##BC136895|C9orf47|286223|chromosome 9 open reading frame 47##AY333281|C9orf47|286223|chromosome 9 open reading frame 47##AK312798|S1PR3|1903|sphingosine-1-phosphate receptor 3##BC060827|S1PR3|1903|sphingosine-1-phosphate receptor 3##NM_005226|S1PR3|1903|sphingosine-1-phosphate receptor 3	0.997732	CTCF.p2:1:0.998
chr1	6546647	6546763	reg1002620.p1	14.282	+	AB097001 NM_001042665 TSC_hg19_v1_chr1_-_6546016	-691	-	TSC_hg19_v1_chr1_-_6545530 AK299523	-1180	-	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	-20503	-	BC015231 NM_001042664	3929	-	AK024676 NM_020631	5054	-	TSC_hg19_v1_chr1_-_6557448 AK125550	10746	-	AB097001|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_001042665|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##AK299523|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC015231|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_001042664|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##AK024676|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_020631|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##AK125550|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	0.992495	CTCF.p2:0:0.992
chr19	42077101	42077220	reg1002937.p2	14.282	+	NM_001130514	-128098	+	TSC_hg19_v1_chr19_-_41945831 AK298197 NM_001167869 NM_001167870 NM_001167871 NM_018035	-131327	-	TSC_hg19_v1_chr19_-_41945814 BC013323 AK316313	-131346	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	5417	+	D90276 AK298701 NM_001817	56274	-	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	114992	-	NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##AK298197|ATP5SL|55101|ATP5S-like##NM_001167869|ATP5SL|55101|ATP5S-like##NM_001167870|ATP5SL|55101|ATP5S-like##NM_001167871|ATP5SL|55101|ATP5S-like##NM_018035|ATP5SL|55101|ATP5S-like##BC013323|ATP5SL|55101|ATP5S-like##AK316313|ATP5SL|55101|ATP5S-like##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7	0.997103	CTCF.p2:5:0.997
chr15	65197826	65197961	reg1004051.p1	14.281	+	AK311036 NM_001195059 NM_025201 TSC_hg19_v1_chr15_+_65134113 AK096203 BC008744 AF494534	-63786	+	BC137503 BC137504 TSC_hg19_v1_chr15_-_65117814 BC018978 AK026345 EU084033 NM_025049 AB185926 AB185927	-80058	-	BC131612 BC148208 AY369207 NM_194272 TSC_hg19_v1_chr15_-_65067789 AK127873	-130147	-	TSC_hg19_v1_chr15_+_65204100 AK098736 NM_182703 AK075298 BC110610 AK307698	6196	+	TSC_hg19_v1_chr15_-_65281780 AF212231 NM_001127889	83916	-	TSC_hg19_v1_chr15_-_65282170 AK172849 AK225527 AK312943 BC000244	84241	-	NM_001195059|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##NM_025201|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK096203|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC008744|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AF494534|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC137503|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC137504|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC018978|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AK026345|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##EU084033|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_025049|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185926|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185927|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC131612|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC148208|RBPMS2|348093|RNA binding protein with multiple splicing 2##AY369207|RBPMS2|348093|RNA binding protein with multiple splicing 2##NM_194272|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK127873|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK098736|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##NM_182703|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK075298|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##BC110610|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK307698|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	0.0	
chr5	39218011	39218141	reg1003733.p1	14.281	+	AF198052 U93049 AF001862 TSC_hg19_v1_chr5_-_39203164	-14959	-	TSC_hg19_v1_chr5_-_39074499 AY515854 BC029608 BC137163 BC137164 BC144509 NM_152756	-143579	-	CU688716 DQ891672 DQ894858 TSC_hg19_v1_chr5_-_39074493 AK128358 CR749280	-143591	-	BC117449 BC143645 BC015933 BX647195 BX647196 TSC_hg19_v1_chr5_-_39219666 AK130159 AK290403 NM_001465 NM_199335	1553	-	TSC_hg19_v1_chr5_-_39270745 AK297077 NM_001243093	52663	-	K02766 AB590412 DQ891410 CU676664 X02176 AK308045 BC020721 NM_001737	146532	-	AF198052|FYB|2533|FYN binding protein##U93049|FYB|2533|FYN binding protein##AF001862|FYB|2533|FYN binding protein##AY515854|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC029608|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137163|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137164|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC144509|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##NM_152756|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##DQ891672|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##DQ894858|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AK128358|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##CR749280|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC117449|FYB|2533|FYN binding protein##BC143645|FYB|2533|FYN binding protein##BC015933|FYB|2533|FYN binding protein##BX647195|FYB|2533|FYN binding protein##BX647196|FYB|2533|FYN binding protein##AK130159|FYB|2533|FYN binding protein##AK290403|FYB|2533|FYN binding protein##NM_001465|FYB|2533|FYN binding protein##NM_199335|FYB|2533|FYN binding protein##AK297077|FYB|2533|FYN binding protein##NM_001243093|FYB|2533|FYN binding protein##K02766|C9|735|complement component 9##DQ891410|C9|735|complement component 9##X02176|C9|735|complement component 9##AK308045|C9|735|complement component 9##BC020721|C9|735|complement component 9##NM_001737|C9|735|complement component 9	0.93025	CTCF.p2:-9:0.930
chr10	93058115	93058262	reg1003785.p1	14.280	+	TSC_hg19_v1_chr10_+_92980539 AL832496	-77654	+	TSC_hg19_v1_chr10_+_92980445 NM_032373	-77780	+	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	-135426	+	BC071762 TSC_hg19_v1_chr10_+_93170064	111870	+	TSC_hg19_v1_chr10_+_93170100 NM_173497 NM_182765 AK295723 AK094625 BC040187 EU832472 EU832551 BX537856	111993	+	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	334573	-	AL832496|PCGF5|84333|polycomb group ring finger 5##NM_032373|PCGF5|84333|polycomb group ring finger 5##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5##NM_173497|HECTD2|143279|HECT domain containing 2##NM_182765|HECTD2|143279|HECT domain containing 2##AK295723|HECTD2|143279|HECT domain containing 2##AK094625|HECTD2|143279|HECT domain containing 2##BC040187|HECTD2|143279|HECT domain containing 2##EU832472|HECTD2|143279|HECT domain containing 2##EU832551|HECTD2|143279|HECT domain containing 2##BX537856|HECTD2|143279|HECT domain containing 2##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C	0.999282	CTCF.p2:-2:0.999
chr11	10229725	10229869	reg1004549.p1	14.279	+	AK098060 TSC_hg19_v1_chr11_+_9779882	-449935	+	TSC_hg19_v1_chr11_+_9685669 AB014540 BC000134 CU674300 AF210818 AK304104	-544091	+	BC000616 TSC_hg19_v1_chr11_+_9685651 AF134894	-544146	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	85969	-	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	96832	+	AK295046 NM_001172431	242070	+	AK098060|LOC283104|283104|uncharacterized LOC283104##AB014540|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000134|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF210818|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AK304104|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000616|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF134894|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3	0.970715	CTCF.p2:1:0.971
chr4	8178676	8178803	reg1004653.p1	14.278	+	DQ413176 AJ748600 AJ748601 TSC_hg19_v1_chr4_-_8160541 BC122567 AK130044 AK094754 BC067214 NM_001130083 NM_001130084 NM_001130085 NM_001130086 NM_001130087 NM_001130088 NM_032432	-18205	-	TSC_hg19_v1_chr4_-_8129388 AK301060	-49354	-	TSC_hg19_v1_chr4_-_8073714 AK094798	-105023	-	TSC_hg19_v1_chr4_+_8201038 BC030283 AK074093 NM_018986 BC068094 AK074402 AK126165 BC131785	22293	+	TSC_hg19_v1_chr4_+_8271480 NM_053044 AY040094 BC034390 BC035717 AY280665 AY280666 AB528940 DQ891188 DQ894371	92836	+	TSC_hg19_v1_chr4_-_8430196 AK313242	251462	-	DQ413176|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748600|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748601|ABLIM2|84448|actin binding LIM protein family, member 2##BC122567|ABLIM2|84448|actin binding LIM protein family, member 2##AK130044|ABLIM2|84448|actin binding LIM protein family, member 2##AK094754|ABLIM2|84448|actin binding LIM protein family, member 2##BC067214|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130083|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130084|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130085|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130086|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130087|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130088|ABLIM2|84448|actin binding LIM protein family, member 2##NM_032432|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##BC030283|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074093|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##NM_018986|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC068094|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074402|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK126165|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC131785|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##NM_053044|HTRA3|94031|HtrA serine peptidase 3##AY040094|HTRA3|94031|HtrA serine peptidase 3##BC034390|HTRA3|94031|HtrA serine peptidase 3##BC035717|HTRA3|94031|HtrA serine peptidase 3##AY280665|HTRA3|94031|HtrA serine peptidase 3##AY280666|HTRA3|94031|HtrA serine peptidase 3##DQ891188|HTRA3|94031|HtrA serine peptidase 3##DQ894371|HTRA3|94031|HtrA serine peptidase 3##AK313242|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl	0.209434	
chr5	42057477	42057602	reg1004046.p1	14.278	+	AK024075 NM_012176 NM_033484 BC048098 AK001003 BC040011 AF129534 AF176703	-132153	+	TSC_hg19_v1_chr5_+_41904459 BC131721 NM_175921 BX648350	-153062	+	TSC_hg19_v1_chr5_-_41870706 NM_000436	-186793	-	AK000840 TSC_hg19_v1_chr5_-_42175357	117817	-	TSC_hg19_v1_chr5_+_42423913 NM_000163 X06562	366379	+	AF230801 NM_001242399 NM_001242400 AF230800	367026	+	AK024075|FBXO4|26272|F-box protein 4##NM_012176|FBXO4|26272|F-box protein 4##NM_033484|FBXO4|26272|F-box protein 4##BC048098|FBXO4|26272|F-box protein 4##AK001003|FBXO4|26272|F-box protein 4##BC040011|FBXO4|26272|F-box protein 4##AF129534|FBXO4|26272|F-box protein 4##AF176703|FBXO4|26272|F-box protein 4##BC131721|C5orf51|285636|chromosome 5 open reading frame 51##NM_175921|C5orf51|285636|chromosome 5 open reading frame 51##BX648350|C5orf51|285636|chromosome 5 open reading frame 51##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1##NM_000163|GHR|2690|growth hormone receptor##X06562|GHR|2690|growth hormone receptor##AF230801|GHR|2690|growth hormone receptor##NM_001242399|GHR|2690|growth hormone receptor##NM_001242400|GHR|2690|growth hormone receptor##AF230800|GHR|2690|growth hormone receptor	0.990305	CTCF.p2:-4:0.990
chr6	91189144	91189286	reg1003878.p1	14.277	+	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-182603	-	AJ271878 TSC_hg19_v1_chr6_-_91006556 NM_021813	-182704	-	AB527151 AF296766 NM_032602	-585029	+	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	107468	-	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	107623	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	2939968	-	AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##AF296766|GJA10|84694|gap junction protein, alpha 10, 62kDa##NM_032602|GJA10|84694|gap junction protein, alpha 10, 62kDa##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7	0.997885	CTCF.p2:17:0.998
chr9	100836790	100836934	reg1003303.p1	14.277	+	TSC_hg19_v1_chr9_+_100819020 NM_018946 AK316608 BC000008 AK001659 BC019315 AF257466 CU676426 DQ892167 DQ895361	-17847	+	TSC_hg19_v1_chr9_+_100745672 Y07569	-91135	+	TSC_hg19_v1_chr9_+_100745652 BC019658 Y07570 BC013003	-91210	+	TSC_hg19_v1_chr9_-_100881503 AB529155 DQ893293 DQ896623 AF220130 AF220131 D50919 NM_014788 NM_033219 BC006333 NM_033220 AK292825	44623	-	TSC_hg19_v1_chr9_-_100881526 AK055833	44682	-	NM_003389	98311	-	NM_018946|NANS|54187|N-acetylneuraminic acid synthase##AK316608|NANS|54187|N-acetylneuraminic acid synthase##BC000008|NANS|54187|N-acetylneuraminic acid synthase##AK001659|NANS|54187|N-acetylneuraminic acid synthase##BC019315|NANS|54187|N-acetylneuraminic acid synthase##AF257466|NANS|54187|N-acetylneuraminic acid synthase##DQ892167|NANS|54187|N-acetylneuraminic acid synthase##DQ895361|NANS|54187|N-acetylneuraminic acid synthase##Y07569|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##BC019658|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##Y07570|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##BC013003|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##DQ893293|TRIM14|9830|tripartite motif containing 14##DQ896623|TRIM14|9830|tripartite motif containing 14##AF220130|TRIM14|9830|tripartite motif containing 14##AF220131|TRIM14|9830|tripartite motif containing 14##D50919|TRIM14|9830|tripartite motif containing 14##NM_014788|TRIM14|9830|tripartite motif containing 14##NM_033219|TRIM14|9830|tripartite motif containing 14##BC006333|TRIM14|9830|tripartite motif containing 14##NM_033220|TRIM14|9830|tripartite motif containing 14##AK292825|TRIM14|9830|tripartite motif containing 14##AK055833|TRIM14|9830|tripartite motif containing 14##NM_003389|CORO2A|7464|coronin, actin binding protein, 2A	0.97343	CTCF.p2:-13:0.973
chr10	124892623	124892756	reg1002640.p1	14.276	+	TSC_hg19_v1_chr10_+_124768521 BC013756 U12778 AK314241 AB527625 CU680672 AL831821	-124161	+	TSC_hg19_v1_chr10_+_124768471 NM_001609 AK298638	-124241	+	CR749800 TSC_hg19_v1_chr10_-_124768312 AK226143 AK026626 NM_022466 BX647958 BC022564	-124418	-	NM_001105574 TSC_hg19_v1_chr10_+_124895620	2904	+	NM_005519	14948	+	NM_001007793 NM_004725 TSC_hg19_v1_chr10_+_124913846	21116	+	BC013756|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##U12778|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK314241|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AL831821|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##NM_001609|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK298638|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##CR749800|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##AK226143|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##AK026626|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##NM_022466|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##BX647958|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##BC022564|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##NM_001105574|HMX3|340784|H6 family homeobox 3##NM_005519|HMX2|3167|H6 family homeobox 2##NM_001007793|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##NM_004725|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)	0.07077	
chr15	65611298	65611420	reg1002749.p2	14.276	+	BC006389 NM_017851 TSC_hg19_v1_chr15_-_65579223 AK000516	-32199	-	BC035776 AF035408 AY358904 AK225652 AK225926 AK313352 TSC_hg19_v1_chr15_-_65503811 NM_003613	-107547	-	TSC_hg19_v1_chr15_-_65477676 AL136922 AK308133 AK292316 AK310614	-133673	-	BC042054 TSC_hg19_v1_chr15_-_65670341 BC067107 NM_004884	58992	-	TSC_hg19_v1_chr15_-_65715258 AB529157	103886	-	TSC_hg19_v1_chr15_-_65715412 AB052622 NM_020962	104042	-	BC006389|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##NM_017851|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##AK000516|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##BC035776|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AF035408|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AY358904|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225652|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225926|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK313352|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##NM_003613|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AL136922|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK308133|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK292316|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK310614|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##AB052622|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##NM_020962|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4	0.885826	CTCF.p2:-9:0.886
chr4	77101111	77101248	reg1003717.p1	14.276	+	TSC_hg19_v1_chr4_-_77069551 AB527805 DQ895978 EU176395 AK315160 AK001517 AK299442 AK300036 AK223352 AF157322 AK222752 AK307571 BC012559 BX538002 BC034226 NM_017426	-31587	-	AY543660 BC008397 BC017913 NM_001130016 NM_001179 AK295305 AK308810 AY543655	-105310	+	BT006787 AB590165 CU675091 DQ895703 EU176355 Y15220 U59286 U66096 BC005292 AF002985 AF030514 BC110986 AF352781 BC012532 NM_005409	-143935	-	TSC_hg19_v1_chr4_-_77134713 AB384843 BT006939 CU692412 DQ893535 DQ893757 BC021892	33529	-	TSC_hg19_v1_chr4_-_77134757 AK296519 AK313016	33610	-	D12676 TSC_hg19_v1_chr4_-_77134978	33786	-	DQ895978|NUP54|53371|nucleoporin 54kDa##EU176395|NUP54|53371|nucleoporin 54kDa##AK315160|NUP54|53371|nucleoporin 54kDa##AK001517|NUP54|53371|nucleoporin 54kDa##AK299442|NUP54|53371|nucleoporin 54kDa##AK300036|NUP54|53371|nucleoporin 54kDa##AK223352|NUP54|53371|nucleoporin 54kDa##AF157322|NUP54|53371|nucleoporin 54kDa##AK222752|NUP54|53371|nucleoporin 54kDa##AK307571|NUP54|53371|nucleoporin 54kDa##BC012559|NUP54|53371|nucleoporin 54kDa##BX538002|NUP54|53371|nucleoporin 54kDa##BC034226|NUP54|53371|nucleoporin 54kDa##NM_017426|NUP54|53371|nucleoporin 54kDa##AY543660|ART3|419|ADP-ribosyltransferase 3##BC008397|ART3|419|ADP-ribosyltransferase 3##BC017913|ART3|419|ADP-ribosyltransferase 3##NM_001130016|ART3|419|ADP-ribosyltransferase 3##NM_001179|ART3|419|ADP-ribosyltransferase 3##AK295305|ART3|419|ADP-ribosyltransferase 3##AK308810|ART3|419|ADP-ribosyltransferase 3##AY543655|ART3|419|ADP-ribosyltransferase 3##BT006787|CXCL11|6373|chemokine (C-X-C motif) ligand 11##DQ895703|CXCL11|6373|chemokine (C-X-C motif) ligand 11##EU176355|CXCL11|6373|chemokine (C-X-C motif) ligand 11##Y15220|CXCL11|6373|chemokine (C-X-C motif) ligand 11##U59286|CXCL11|6373|chemokine (C-X-C motif) ligand 11##U66096|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BC005292|CXCL11|6373|chemokine (C-X-C motif) ligand 11##AF002985|CXCL11|6373|chemokine (C-X-C motif) ligand 11##AF030514|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BC110986|CXCL11|6373|chemokine (C-X-C motif) ligand 11##AF352781|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BC012532|CXCL11|6373|chemokine (C-X-C motif) ligand 11##NM_005409|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BT006939|SCARB2|950|scavenger receptor class B, member 2##DQ893535|SCARB2|950|scavenger receptor class B, member 2##DQ893757|SCARB2|950|scavenger receptor class B, member 2##BC021892|SCARB2|950|scavenger receptor class B, member 2##AK296519|SCARB2|950|scavenger receptor class B, member 2##AK313016|SCARB2|950|scavenger receptor class B, member 2##D12676|SCARB2|950|scavenger receptor class B, member 2	0.999823	CTCF.p2:-13:1.000
chr14	103384294	103384437	reg1003159.p4	14.275	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	-140465	+	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	-140546	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-325204	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	4633	+	TSC_hg19_v1_chr14_-_103430941 BX248752	46593	-	AB384568 TSC_hg19_v1_chr14_-_103523568	139176	-	AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AF155595|RCOR1|23186|REST corepressor 1##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)##BX248752|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)	0.640213	CTCF.p2:20:0.640
chr1	212838705	212838818	reg1002301.p1	14.274	+	AK301981 NM_153606 BC035007	-40960	+	NM_001206486 AB066566 AB078026 AB078027 AB528347 AY313926 AY313927 BT006996 CR450334 DQ892723 DQ895972 AB209032	-50354	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	-56654	+	AB463432 HQ258061 TSC_hg19_v1_chr1_-_212873132	34359	-	TSC_hg19_v1_chr1_-_212873221 BC117489 BC117491	34469	-	TSC_hg19_v1_chr1_-_212873317 AF255346 NM_018664	34559	-	AK301981|FAM71A|149647|family with sequence similarity 71, member A##NM_153606|FAM71A|149647|family with sequence similarity 71, member A##BC035007|FAM71A|149647|family with sequence similarity 71, member A##NM_001206486|ATF3|467|activating transcription factor 3##AB066566|ATF3|467|activating transcription factor 3##AB078026|ATF3|467|activating transcription factor 3##AB078027|ATF3|467|activating transcription factor 3##AY313926|ATF3|467|activating transcription factor 3##AY313927|ATF3|467|activating transcription factor 3##BT006996|ATF3|467|activating transcription factor 3##CR450334|ATF3|467|activating transcription factor 3##DQ892723|ATF3|467|activating transcription factor 3##DQ895972|ATF3|467|activating transcription factor 3##AB209032|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3##HQ258061|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117489|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117491|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##AF255346|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##NM_018664|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3	0.989337	CTCF.p2:-6:0.989
chr1	209364108	209364215	reg1003112.p1	14.271	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-946512	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-1279604	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-1279778	-	AK091113 AX746785 NM_001104548	238004	+	NM_020439 AK095713 AK289675 AF428261 BC032787	392899	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	460518	-	NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3	0.896004	CTCF.p2:8:0.896
chr15	83137091	83137216	reg1004191.p1	14.270	+	NM_198181 CR936812	-38412	+	CR936602 NM_001164465	-118975	-	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-192263	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	72083	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	103382	-	CU690752 BC050629 NM_030594	179521	-	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	1.760578	CTCF.p2:-7:0.999	CTCF.p2:-100:0.762
chr1	155064045	155064155	reg1003660.p1	14.269	+	TSC_hg19_v1_chr1_+_155051392 BC017722 NM_004952 BC110406 U14187 AK296030 AK316248 L37360 DQ891668 DQ894854	-12760	+	TSC_hg19_v1_chr1_+_155036206 NM_005227 NM_182689 NM_182690 BC107483 AK301966 AJ006352 AJ006353 U14188 CR533569	-27850	+	TSC_hg19_v1_chr1_+_155023819 AK308172 AK295614 AK296925 AK297468 U41767 EU176173 AB590397 AY518542 BT009764 U46005	-40264	+	AK057845 TSC_hg19_v1_chr1_+_155099946	35841	+	AK313117 NM_004428 NM_182685 TSC_hg19_v1_chr1_+_155100351 AK289589 AK308965 AL833641 AK311677 BC032698 BC095432 M57730 CR457416 DQ890722 DQ893900	36278	+	TSC_hg19_v1_chr1_+_155108327 AK289551 NM_001122837 NM_001122839 NM_018845 AF126023 BC009621 AF126024 BC012378	44209	+	BC017722|EFNA3|1944|ephrin-A3##NM_004952|EFNA3|1944|ephrin-A3##BC110406|EFNA3|1944|ephrin-A3##U14187|EFNA3|1944|ephrin-A3##AK296030|EFNA3|1944|ephrin-A3##AK316248|EFNA3|1944|ephrin-A3##L37360|EFNA3|1944|ephrin-A3##DQ891668|EFNA3|1944|ephrin-A3##DQ894854|EFNA3|1944|ephrin-A3##NM_005227|EFNA4|1945|ephrin-A4##NM_182689|EFNA4|1945|ephrin-A4##NM_182690|EFNA4|1945|ephrin-A4##BC107483|EFNA4|1945|ephrin-A4##AJ006352|EFNA4|1945|ephrin-A4##AJ006353|EFNA4|1945|ephrin-A4##U14188|EFNA4|1945|ephrin-A4##CR533569|EFNA4|1945|ephrin-A4##AK308172|ADAM15|8751|ADAM metallopeptidase domain 15##AK295614|ADAM15|8751|ADAM metallopeptidase domain 15##AK296925|ADAM15|8751|ADAM metallopeptidase domain 15##AK297468|ADAM15|8751|ADAM metallopeptidase domain 15##U41767|ADAM15|8751|ADAM metallopeptidase domain 15##EU176173|ADAM15|8751|ADAM metallopeptidase domain 15##AY518542|ADAM15|8751|ADAM metallopeptidase domain 15##BT009764|ADAM15|8751|ADAM metallopeptidase domain 15##U46005|ADAM15|8751|ADAM metallopeptidase domain 15##AK057845|EFNA1|1942|ephrin-A1##AK313117|EFNA1|1942|ephrin-A1##NM_004428|EFNA1|1942|ephrin-A1##NM_182685|EFNA1|1942|ephrin-A1##AK289589|EFNA1|1942|ephrin-A1##AL833641|EFNA1|1942|ephrin-A1##BC032698|EFNA1|1942|ephrin-A1##BC095432|EFNA1|1942|ephrin-A1##M57730|EFNA1|1942|ephrin-A1##CR457416|EFNA1|1942|ephrin-A1##DQ890722|EFNA1|1942|ephrin-A1##DQ893900|EFNA1|1942|ephrin-A1##AK289551|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122837|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122839|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_018845|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126023|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC009621|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126024|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC012378|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	0.997181	CTCF.p2:-4:0.997
chr11	73336870	73336973	reg1002574.p1	14.268	+	D87470 TSC_hg19_v1_chr11_-_73309158 AK292054 EF197985 BC052341 EF363480 NM_015159	-27723	-	TSC_hg19_v1_chr11_+_73087683 AF319553 NM_032871	-249230	+	TSC_hg19_v1_chr11_+_73087471 AK027899 NM_152222 BC051810 BC017279	-249484	+	AF101054 NM_001130033 NM_021200 U89715	20301	+	NM_001130034 NM_001130035 BC008075 AB209716 AK289620 TSC_hg19_v1_chr11_+_73358695 AK296033 AK301299 AF093249 AF100612 AK289909 AK311158	21742	+	AK290109 NM_001130036	22813	+	D87470|FAM168A|23201|family with sequence similarity 168, member A##AK292054|FAM168A|23201|family with sequence similarity 168, member A##EF197985|FAM168A|23201|family with sequence similarity 168, member A##BC052341|FAM168A|23201|family with sequence similarity 168, member A##EF363480|FAM168A|23201|family with sequence similarity 168, member A##NM_015159|FAM168A|23201|family with sequence similarity 168, member A##AF319553|RELT|84957|RELT tumor necrosis factor receptor##NM_032871|RELT|84957|RELT tumor necrosis factor receptor##AK027899|RELT|84957|RELT tumor necrosis factor receptor##NM_152222|RELT|84957|RELT tumor necrosis factor receptor##BC051810|RELT|84957|RELT tumor necrosis factor receptor##BC017279|RELT|84957|RELT tumor necrosis factor receptor##AF101054|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_021200|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##U89715|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130034|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130035|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##BC008075|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AB209716|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289620|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK296033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK301299|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF093249|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF100612|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289909|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK311158|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK290109|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130036|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1	0.997993	CTCF.p2:1:0.998
chr14	21966828	21966972	reg1004655.p1	14.268	+	TSC_hg19_v1_chr14_+_21945382 AK299807 AK298555 BC020727 BC013689 BC020292 AB018280	-21495	+	TSC_hg19_v1_chr14_+_21945364 AK295913	-21539	+	TSC_hg19_v1_chr14_+_21945341 NM_014828 BC035050	-21558	+	EU446825 TSC_hg19_v1_chr14_-_21979476 BC052244 AK000222 BC001650 BC003031 BC014427 NM_019852 AK300289 AK304251 AK304570	12535	-	AK294051 BC024245 AK296414 BC090958 AK289358 TSC_hg19_v1_chr14_-_21994473	27512	-	AK293574 AK001276 BC136528 BC136529 AK299931 X98834 AB002358 NM_005407	38285	-	AK299807|TOX4|9878|TOX high mobility group box family member 4##AK298555|TOX4|9878|TOX high mobility group box family member 4##BC020727|TOX4|9878|TOX high mobility group box family member 4##BC013689|TOX4|9878|TOX high mobility group box family member 4##BC020292|TOX4|9878|TOX high mobility group box family member 4##AB018280|TOX4|9878|TOX high mobility group box family member 4##AK295913|TOX4|9878|TOX high mobility group box family member 4##NM_014828|TOX4|9878|TOX high mobility group box family member 4##BC035050|TOX4|9878|TOX high mobility group box family member 4##EU446825|METTL3|56339|methyltransferase like 3##BC052244|METTL3|56339|methyltransferase like 3##AK000222|METTL3|56339|methyltransferase like 3##BC001650|METTL3|56339|methyltransferase like 3##BC003031|METTL3|56339|methyltransferase like 3##BC014427|METTL3|56339|methyltransferase like 3##NM_019852|METTL3|56339|methyltransferase like 3##AK300289|METTL3|56339|methyltransferase like 3##AK304251|METTL3|56339|methyltransferase like 3##AK304570|METTL3|56339|methyltransferase like 3##AK294051|SALL2|6297|sal-like 2 (Drosophila)##BC024245|SALL2|6297|sal-like 2 (Drosophila)##AK296414|SALL2|6297|sal-like 2 (Drosophila)##BC090958|SALL2|6297|sal-like 2 (Drosophila)##AK289358|SALL2|6297|sal-like 2 (Drosophila)##AK293574|SALL2|6297|sal-like 2 (Drosophila)##AK001276|SALL2|6297|sal-like 2 (Drosophila)##BC136528|SALL2|6297|sal-like 2 (Drosophila)##BC136529|SALL2|6297|sal-like 2 (Drosophila)##AK299931|SALL2|6297|sal-like 2 (Drosophila)##X98834|SALL2|6297|sal-like 2 (Drosophila)##AB002358|SALL2|6297|sal-like 2 (Drosophila)##NM_005407|SALL2|6297|sal-like 2 (Drosophila)	0.988423	CTCF.p2:-14:0.988
chr19	13075862	13075989	reg1002309.p1	14.268	+	TSC_hg19_v1_chr19_-_13068038 AF479749 NM_052850	-7880	-	AJ295986 BC004944 BC013027 BC013039 AF412816 AF475095 AJ429498 CU686712 BC069200 TSC_hg19_v1_chr19_-_13068030	-7906	-	TSC_hg19_v1_chr19_+_13056675 AK289908 BC088364 BC014026 AB209713 D21235 AB463210 L37720	-19194	+	AK095926 NM_152654 BC101800 BC113476 AB070695 HQ258091	4527	+	TSC_hg19_v1_chr19_+_13106288 BC052801 NM_002501 AB385580 BT019732	30477	+	TSC_hg19_v1_chr19_+_13134807 AK297261 U18759	58879	+	AF479749|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##NM_052850|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AJ295986|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC004944|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC013027|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC013039|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AF412816|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AF475095|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AJ429498|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC069200|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AK289908|RAD23A|5886|RAD23 homolog A (S. cerevisiae)##BC088364|RAD23A|5886|RAD23 homolog A (S. cerevisiae)##BC014026|RAD23A|5886|RAD23 homolog A (S. cerevisiae)##AB209713|RAD23A|5886|RAD23 homolog A (S. cerevisiae)##D21235|RAD23A|5886|RAD23 homolog A (S. cerevisiae)##AK095926|DAND5|199699|DAN domain family, member 5##NM_152654|DAND5|199699|DAN domain family, member 5##BC101800|DAND5|199699|DAN domain family, member 5##BC113476|DAND5|199699|DAN domain family, member 5##AB070695|DAND5|199699|DAN domain family, member 5##HQ258091|DAND5|199699|DAN domain family, member 5##NM_002501|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BT019732|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK297261|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U18759|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	0.018332	
chr1	159167892	159168022	reg1004048.p1	14.266	+	AK289541 NM_021189 TSC_hg19_v1_chr1_+_159141404 AK308915 NM_001127173 AF363367 AY358332 AF062733 BC033819 AY046418 AF529206 DQ890848 DQ894002	-26492	+	AK292042 BC010940 AF024714 NM_004833	-121357	-	NM_001206567 NM_005531 TSC_hg19_v1_chr1_+_158979716 AF208043 M63838 AB208989 BC017059 AF086545 AK296228 AK307957	-188167	+	AK291593 NM_002036	5845	+	NM_001122951 U01839	7091	+	NM_002001 X06948	91546	+	AK289541|CADM3|57863|cell adhesion molecule 3##NM_021189|CADM3|57863|cell adhesion molecule 3##AK308915|CADM3|57863|cell adhesion molecule 3##NM_001127173|CADM3|57863|cell adhesion molecule 3##AF363367|CADM3|57863|cell adhesion molecule 3##AY358332|CADM3|57863|cell adhesion molecule 3##AF062733|CADM3|57863|cell adhesion molecule 3##BC033819|CADM3|57863|cell adhesion molecule 3##AY046418|CADM3|57863|cell adhesion molecule 3##AF529206|CADM3|57863|cell adhesion molecule 3##DQ890848|CADM3|57863|cell adhesion molecule 3##DQ894002|CADM3|57863|cell adhesion molecule 3##AK292042|AIM2|9447|absent in melanoma 2##BC010940|AIM2|9447|absent in melanoma 2##AF024714|AIM2|9447|absent in melanoma 2##NM_004833|AIM2|9447|absent in melanoma 2##NM_001206567|IFI16|3428|interferon, gamma-inducible protein 16##NM_005531|IFI16|3428|interferon, gamma-inducible protein 16##AF208043|IFI16|3428|interferon, gamma-inducible protein 16##M63838|IFI16|3428|interferon, gamma-inducible protein 16##AB208989|IFI16|3428|interferon, gamma-inducible protein 16##BC017059|IFI16|3428|interferon, gamma-inducible protein 16##AF086545|IFI16|3428|interferon, gamma-inducible protein 16##AK296228|IFI16|3428|interferon, gamma-inducible protein 16##AK307957|IFI16|3428|interferon, gamma-inducible protein 16##AK291593|DARC|2532|Duffy blood group, chemokine receptor##NM_002036|DARC|2532|Duffy blood group, chemokine receptor##NM_001122951|DARC|2532|Duffy blood group, chemokine receptor##U01839|DARC|2532|Duffy blood group, chemokine receptor##NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide##X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide	0.354151	CTCF.p2:0:0.354
chr14	102904470	102904605	reg1002903.p1	14.264	+	TSC_hg19_v1_chr14_+_102829428 BC030791 AK296395 AK299690 BC142667 BC142715 AK127721	-75112	+	BC151230 AB002327 NM_001172631 NM_014844 TSC_hg19_v1_chr14_+_102829304	-75225	+	NM_001177611 AF228148 TSC_hg19_v1_chr14_-_102829228 AF228149 BC000600 AK056112 NM_001177612 NM_032630	-75385	-	AK291868 TSC_hg19_v1_chr14_-_102976070	71496	-	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	71577	-	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	154461	+	BC030791|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK296395|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK299690|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142667|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142715|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK127721|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC151230|TECPR2|9895|tectonin beta-propeller repeat containing 2##AB002327|TECPR2|9895|tectonin beta-propeller repeat containing 2##NM_001172631|TECPR2|9895|tectonin beta-propeller repeat containing 2##NM_014844|TECPR2|9895|tectonin beta-propeller repeat containing 2##NM_001177611|CINP|51550|cyclin-dependent kinase 2 interacting protein##AF228148|CINP|51550|cyclin-dependent kinase 2 interacting protein##AF228149|CINP|51550|cyclin-dependent kinase 2 interacting protein##BC000600|CINP|51550|cyclin-dependent kinase 2 interacting protein##AK056112|CINP|51550|cyclin-dependent kinase 2 interacting protein##NM_001177612|CINP|51550|cyclin-dependent kinase 2 interacting protein##NM_032630|CINP|51550|cyclin-dependent kinase 2 interacting protein##AK291868|ANKRD9|122416|ankyrin repeat domain 9##BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1	0.999491	CTCF.p2:-14:0.999
chr17	55935417	55935543	reg1003437.p1	14.263	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	-8076	-	AK093888 AX748353 NM_170721	-601107	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-601507	+	AK000746 NM_017949	45269	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	97196	-	TSC_hg19_v1_chr17_+_56065413 AB593183	129994	+	AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.999861	CTCF.p2:-13:1.000
chr19	3076068	3076205	reg1003119.p1	14.263	+	TSC_hg19_v1_chr19_-_3062919 AB527754 HQ258149 BC113735 BC113737 NM_198969 AK094591	-13129	-	X73357 TSC_hg19_v1_chr19_-_3062347 U04241 AF072902 AK314713 NM_001130 NM_198970	-13854	-	X73358 TSC_hg19_v1_chr19_-_3061344	-14839	-	TSC_hg19_v1_chr19_+_3094359 BC089041 NM_002067	18222	+	TSC_hg19_v1_chr19_+_3094528 BC096225 BC096226 BC096227 AB463701 AF011497 AF493900 CR457004 AB209435	18455	+	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	46257	+	HQ258149|AES|166|amino-terminal enhancer of split##BC113735|AES|166|amino-terminal enhancer of split##BC113737|AES|166|amino-terminal enhancer of split##NM_198969|AES|166|amino-terminal enhancer of split##AK094591|AES|166|amino-terminal enhancer of split##X73357|AES|166|amino-terminal enhancer of split##U04241|AES|166|amino-terminal enhancer of split##AF072902|AES|166|amino-terminal enhancer of split##AK314713|AES|166|amino-terminal enhancer of split##NM_001130|AES|166|amino-terminal enhancer of split##NM_198970|AES|166|amino-terminal enhancer of split##X73358|AES|166|amino-terminal enhancer of split##BC089041|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##NM_002067|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096225|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096226|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096227|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF011497|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF493900|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##CR457004|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AB209435|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)	0.408809	CTCF.p2:5:0.409
chr5	39283540	39283670	reg1004236.p1	14.262	+	TSC_hg19_v1_chr5_-_39270745 AK297077 NM_001243093	-12866	-	BC117449 BC143645 BC015933 BX647195 BX647196 TSC_hg19_v1_chr5_-_39219666 AK130159 AK290403 NM_001465 NM_199335	-63976	-	AF198052 U93049 AF001862 TSC_hg19_v1_chr5_-_39203164	-80488	-	K02766 AB590412 DQ891410 CU676664 X02176 AK308045 BC020721 NM_001737	81003	-	DQ891872 EU176643 AB590149 CU678354 AF188298 TSC_hg19_v1_chr5_-_39394510 U39050	110866	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	141346	-	AK297077|FYB|2533|FYN binding protein##NM_001243093|FYB|2533|FYN binding protein##BC117449|FYB|2533|FYN binding protein##BC143645|FYB|2533|FYN binding protein##BC015933|FYB|2533|FYN binding protein##BX647195|FYB|2533|FYN binding protein##BX647196|FYB|2533|FYN binding protein##AK130159|FYB|2533|FYN binding protein##AK290403|FYB|2533|FYN binding protein##NM_001465|FYB|2533|FYN binding protein##NM_199335|FYB|2533|FYN binding protein##AF198052|FYB|2533|FYN binding protein##U93049|FYB|2533|FYN binding protein##AF001862|FYB|2533|FYN binding protein##K02766|C9|735|complement component 9##DQ891410|C9|735|complement component 9##X02176|C9|735|complement component 9##AK308045|C9|735|complement component 9##BC020721|C9|735|complement component 9##NM_001737|C9|735|complement component 9##DQ891872|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##EU176643|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AF188298|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U39050|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	0.826556	CTCF.p2:12:0.827
chr14	106467355	106467532	reg1002200.p6	14.261	+	TSC_hg19_v1_chr14_-_106453169 X17117 AK129517 AK130825 BC065733 X59702	-14273	-	U32200 U32268 U32334 U32335 U32336 U32488 U32490 U32599 U32608 U32609 U32947 U32948 U32950 U32963 U33799 U33801 AF028098 AF028106 AF028107 AF028114 AF028118 AY155550 AY155551 DQ454559 AF460797 AF460726 AF460724 AF460827 DQ454629 DQ454614 DQ454962 GQ232822 DQ454705 DQ523871 DQ454580 DQ523917 DQ523919 AY003767 DQ454466 DQ454560 DQ454565 DQ454682 EU099268 GU552685 AY003808 AY003836 DQ454469 DQ454795 DQ454971 DQ454985 DQ454452 DQ454571 DQ454944 DQ454960 DQ523896 EF583670 DQ454558 DQ454677 DQ454859 DQ454868 DQ455000 DQ523852 DQ523901 DQ454442 DQ523848 HQ704012 DQ100720 DQ454840 DQ454949 FJ840328 FJ873931 HM116191 GQ232887 AJ487491 AJ487492 AJ487493 AJ487498 AJ487506 AY003837 JF810257 AF069907 EF091912 EF175411 EF175427 EF583661 EU350413 EU433868 EU433869 EU433881 EU667601 EU667602 FJ694875 GQ232782 GQ232813 GQ232814 GQ232841 GQ232875 GQ232936 GQ232966 GQ232996 JF810256 GQ232768 EF441747 EF583659 AF103205 AF103114 EF566909 U86787 AF484410 HQ392886 JF894284 AM279467 AM279468 AM279469 AM279470 AM279471 AM279552 AM279555 AM279588 AM279641 AF308558 EU099276 GQ232957 AF408722 HM774202 EU099163 HM774025 HM774888 HM775065 JN110525 JN110528 JN111117 L04330 L04332 L04340 FJ385388 FJ385429 GQ504861 HM774080 HM774150 HM774407 HM774529 HM774561 HM774885 HQ704005 HQ704037 S73138 AF103263 AF082193 AJ008249 AY099261 AY206987 AY998750 DQ097896 EU099144 EU099173 EU099285 AF402947 X94432 AM183993 AY393351 EU099152 EU099269 EU099281 AF306372 AJ236544 AJ271548 AY193806 AY376076 AY376077 AY376090 AY393002 AY393003 AY393011 AY393020 AY393107 AY393113 AY393114 AY393116 AY393122 AY393139 AY393140 AY393227 AY393228 AY393241 AY393250 AY393254 AY393257 AY393259 AY393354 AY393357 AY393363 AY393377 AY393497 AY393500 AY393506 AY393509 AY393511 AY393533 AY393613 AY393616 AY393617 AY393633 AY393637 AY393653 AY393671 AY393676 EU099082 EU099119 EU099146 JF894280 HM995126 JN159306 HM995172 HM995197 HM995672 AY941929 DQ100708 DQ100722 DQ523939 DQ523940 DQ524004 DQ524046 DQ524048 DQ524070 DQ524135 HM994894 HM995065 HM995066 HM995070 HM995071 HM995072 HM995073 HM995088 HM995175 HM995192 HM995193 HM995194 HM995195 HM995196 HM995198 HM995281 HM995297 HM995349 HM995351 HM995538 HM995541 HM995542 HM995586 HM995587 HM995589 HM995591 HM995593 HM995610 HM995612 HM995613 HM996403 HM996541 AY971055 DQ926099 AB063667 AB063719 AB063917 AB066970 AB066981 AB067004 AB067009 AB067029 AB067072 AB067119 AB067126 AB067131 AB067253 AB363079 AB363093 AB363142 AB363149 AB363155 AF035019 AF035020 AF209860 AJ239337 AJ308447 AY033279 AY033280 AY376105 AY866614 AY941843 AY941858 AY941885 AY941903 AY941937 AY944702 AY944720 DQ065631 DQ065643 DQ065667 DQ065682 DQ065683 DQ065690 DQ065691 DQ926090 DQ926220 DQ926223 DQ926495 DQ926527 EF178106 EU549725 EU549730 FJ385284 FJ385396 HQ378330 JF894278 JF894282 JF894286 U07988 AB063662 AB063801 AB063829 AB063919 AB066925 AB066926 AB066963 AB067152 AB067166 AB067301 AB067307 AB067308 AB067329 AB067390 AB067393 AB363083 AB363143 AB363151 AB363161 AF006523 AF021941 AF021969 AF022007 AF035786 AF062092 AF062194 AF062195 AF062197 AF115113 AF115129 AF174043 AF174084 AF174094 AF174099 AF174107 AF174114 AF174125 AF174127 AF302820 AF455545 AF455547 AJ239344 AJ239371 AJ308466 AJ389196 AJ414005 AJ414014 AJ617573 AY033238 AY055487 AY345921 AY553642 AY553645 AY577308 AY577310 AY640563 AY866611 AY941911 AY941936 AY941945 AY971057 AY971071 DQ100662 DQ100680 DQ100786 DQ100789 DQ100800 DQ100816 DQ100914 DQ100919 DQ225091 DQ926031 DQ926058 DQ926059 DQ926135 DQ926486 DQ926543 FJ385320 FJ385387 GU570212 GU570215 GU570217 GU570269 HQ689739 JF806453 JF806454 JN158766 JN158852 JN159083 JN159282 JN159291 JN159293 JN159302 JN159305 JN159446 L14456 L23558 S73506 U00499 U00505 U00539 U00554 U00562 U00568 U00586 U71104 U85231 U85241 U86522 Z18846 Z34893 Z92888 AF035803 AY686906 AY686915 AY944693 AY944713 AY944721 DQ535285 DQ535302 DQ535348 DQ535375 DQ535476 EF177970 EF178023 EF178112 EF178115 EF178119 EF178135 HM995869 HM995871 AY957509 AY957510 FJ039793 AF062143 AF062151 AF062178 AF062179 AF062226 AF062256 AF062257 AF062262 AF062267 AF062271 AF067121 AF174005 AF174006 AF174009 AF174016 AF174031 AJ009732 M29468 U43758 U43762 Z14213 Z36889 Z46348 Z47223 Z80852 L23559 M24668 AJ010445 TSC_hg19_v1_chr14_-_106453155 BC080557 M18512	-14518	-	AF064915 AF267793 DQ454464 FN563613 FN563615 FN563617 FN563618 FN563619 FN563620 FN563733 FN563734 AF460793 AY393595 DQ523938 FN563493 FN563497 FN563498 FN563499 FN563500 FN563501 FN563502 FN563503 FN563504 FN563505 FN563506 FN563508 FN563532 FN563533 FN563534 FN563535 FN563536 FN563537 FN563539 FN563541 FN563542 FN563543 FN563544 FN563545 FN563546 FN563547 FN563548 FN563549 FN563550 FN563551 FN563552 FN563553 FN563554 FN563555 FN563556 FN563557 FN563558 FN563559 FN563560 FN563561 FN563562 FN563563 FN563564 FN563565 FN563566 FN563568 FN563569 FN563570 FN563601 FN563604 FN563605 FN563606 FN563607 FN563608 FN563610 FN563638 FN563639 FN563640 FN563641 FN563642 FN563643 FN563644 FN563645 FN563646 FN563647 FN563648 FN563649 FN563650 FN563651 FN563652 FN563653 FN563654 FN563655 FN563656 FN563657 FN563658 FN563659 FN563660 FN563661 FN563674 FN563675 FN563676 FN563677 FN563678 FN563679 FN563680 FN563681 FN563682 FN563683 FN563684 FN563685 FN563686 FN563687 FN563688 FN563689 FN563690 FN563691 FN563692 FN563693 FN563694 FN563695 FN563696 FN563697 FN563698 FN563727 FN563728 FN563729 FN563730 FN563731 FN563732 FN563741 FN563742 FN563743 FN563744 FN563745 FN563746 FN563747 FN563748 FN563749 FN563750 FN563751 FN563752 DQ454919 DQ454917 DQ454897 M71234 DQ454581 DQ454690 DQ454896 DQ454978 DQ454888 DQ454959 DQ454895 AF017457 M71225 M71226 DQ523915 L04771 AJ008198 AJ008199 DQ454824 S75894 EU099248 EF407841 JF810281 L21746 AF459631 S76902 AF343422 AF343424 M99372 L21747 DQ454899 AY393584 AY393323 AY393326 AY393327 AY393332 AY393473 AY393474 AY393476 AY393477 AY393479 AY393484 AY393486 AY393487 AY393488 AY393489 AY393490 AY393492 AY393574 AY393575 AY393576 AY393577 AY393578 AY393579 AY393580 AY393581 AY393582 AY393583 AY393585 AY393586 AY393587 AY393588 AY393589 AY393590 AY393591 AY393592 AY393593 AY393594 EU099263 L21734 X65920 DQ524023 AF103096 AF035040 DQ523994 L21733 L21738 L21729 AF015136 AF015137 AF015139 AF015140 AF015141 AF015144 AF015145 AF015146 JN110879 JN110884 JN110895 JN110931 L04333 L04338 L04341 L04762 L04763 L04768 L04769 L04770 L04772 L21726 L21727 L21730 L21731 L21732 L21735 L21736 L21737 L21739 L21740 L21741 L21742 L21744 L21745 L21748 M71217 M71219 M71223 M71227 M71228 M71229 M71230 M71233 U13195 U13196 U13197 U13198 U13199 U13200 U13201 U13202 FJ385406 AF082200 AF103769 AF361061 AF361062 AF361063 AF361064 AF361065 AF361066 AF361067 AF361068 AF361069 AF361070 AF361071 AF361072 U21271 DQ524163 AF166264 L38894 U21250 U21251 U21263 U21264 U21265 AJ239381 AJ007440 DQ523936 DQ523948 DQ523949 DQ523956 DQ523961 DQ523963 DQ523978 DQ523981 DQ523982 DQ523983 DQ523996 DQ523998 DQ524010 DQ524016 DQ524025 DQ524056 DQ524063 DQ524064 DQ524066 DQ524067 DQ524069 DQ524071 DQ524073 DQ524075 DQ524076 DQ524078 DQ524081 DQ524082 DQ524083 DQ524084 DQ524085 DQ524086 DQ524091 DQ524093 DQ524094 DQ524095 DQ524097 DQ524098 DQ524101 DQ524103 DQ524105 DQ524106 DQ524107 DQ524109 DQ524112 DQ524113 DQ524116 DQ524119 DQ524121 DQ524122 DQ524123 DQ524128 DQ524129 DQ524139 DQ524145 DQ524156 DQ524157 DQ926041 HM996448 AF129749 U00535 AB063677 AB063678 AB063679 AB063680 AB063686 AB063687 AB063697 AB063724 AB063750 AB063809 AB063891 AB063907 AB063912 AB063922 AB066943 AB066951 AB066952 AB067336 AB067338 AB067339 AB067340 AB067341 AB067342 AB067343 AB067344 AB067347 AB067349 AB067351 AB067353 AB067355 AB067357 AB067358 AB067361 AB067363 AB067364 AB067365 AB067366 AB067368 AB067369 AB067370 AB067373 AB067374 AB067376 AF013615 AF021985 AF035039 AF062123 AF062213 AF062284 AF078942 AF110149 AF174044 AJ308465 AM279625 AM279626 AM279627 AY033244 AY033245 AY033248 AY033249 AY033259 AY033260 AY033261 AY033269 AY033277 AY033278 AY270187 AY270188 AY270189 AY685266 AY941880 AY941881 AY941882 AY941890 AY941918 AY941924 AY941925 AY971140 DQ005277 DQ005294 DQ100886 DQ100891 DQ100997 DQ205179 DQ212525 DQ212526 DQ535278 DQ535313 DQ535323 DQ926075 DQ926092 DQ926147 DQ926280 DQ926430 DQ926455 DQ926581 DQ926593 EF178076 FJ385286 FJ490201 HQ378327 S71250 U00548 U00558 X67879 X67880 X67881 X67882 X67883 X67884 X67885 X67886 X67887 X67888 X67889 X67890 X67891 X67892 X67893 X67894 X67895 X67896 X67897 X67898 X67900 Z15110 M18510 Z14210 Z14207 Z14209 AY392985 AY392987 AY392988 AY392989 AY392990 AY392991 AY392992 AY392993 AY392994 AY392995 AY392997 AY392998 AY393098 AY393099 AY393100 AY393101 AY393102 AY393103 AY393104 AY393205 AY393206 AY393207 AY393208 AF062114 AF062137 AF062165 AF062219 AF062254 AF062273 AY452136 AY452137 L21957 X65916 X65917 X65918 Z14158 Z14159 Z14160 Z14161 Z14162 Z14163 Z14164 Z14184 Z14185 Z14186 Z14187 Z14188 Z14208 Z14211 Z14223 Z47236 BC089412 AY510105 M34029 BX648616 TSC_hg19_v1_chr14_-_106406109	-61572	-	GQ232825 GU552779 GU552687 GU552689 AY003848 FJ873924 FJ873955 GQ232946 HM116167 EF407847 EU350414 GQ232973 HM774711 EF407839 EF441752 U86801 AF211930 AM279559 HM774196 EU099286 EU146322 L04328 L04336 L04337 L33037 AY062319 FJ385375 FJ385408 FJ385414 FJ385418 FJ385419 HM774332 HM774418 HM774599 HM774606 AF103282 EU099067 EU099203 EU099287 EU146373 EU146380 FJ385394 EU099221 EU099283 AF306375 AF306376 AM259139 AY062320 AY392849 AY393007 AY393013 AY393111 AY393223 AY393232 AY393255 AY393368 AY393531 AY393610 AY393666 DQ100814 EU099253 HM996275 AY033262 AY033283 EF177964 FJ385299 AB022655 AB067168 AB067394 AF022000 AJ239360 AJ414006 AY553644 AY553647 AY885171 DQ926345 FJ039788 HM152522 M17750 M17751 U00569 U00580 AY686877 AY944696 DQ535282 DQ535443 DQ535465 DQ535484 EF178053 EF178130 FJ195468 FJ195471 HM152519 AF062134 AF062139 AF062140 AF062142 AF062221 L01278 X65883 X65885 X65887 X65888 X65891 X65892 X65893 Z47274 Z47275 Z47276 Z47277 Z80847 BC075840 TSC_hg19_v1_chr14_-_106471733 BX640724 AK097348 AK126543 AK304469 BX640847 S42403	4214	-	U49664 U32269 U32952 AY312398 AY312399 DQ454445 DQ454564 DQ454725 DQ524089 DQ454727 DQ454701 AF460719 AF460723 AF460756 AF460759 AF460771 AF460834 AF460823 AF460829 AF069906 DQ454534 DQ454674 DQ454797 DQ454818 GQ232799 DQ454530 DQ454764 Z30560 DQ454570 DQ454557 DQ454637 GU552723 GQ232831 Z30574 DQ454608 DQ454707 DQ454862 DQ454866 DQ454867 DQ454932 DQ523879 GQ232818 Z30544 Z30556 Z30563 Z30597 Z30672 DQ454537 DQ454600 Z30594 DQ454991 Z30548 DQ454533 DQ454966 DQ523863 DQ454575 DQ454591 DQ454675 DQ454975 DQ454989 HM116173 AY003860 DQ454688 EF091927 JF810280 EU099245 AY393163 EU099075 EU099102 AY393165 EU099215 AM183979 AY393166 AY393171 AY393177 AY393179 AY393180 AY393181 AY393183 AY393184 S74500 EU620003 AF103363 AF400158 AJ240597 JN110684 S74642 Z46847 FJ385345 FJ385356 FJ385426 GQ504882 AY062307 AF103159 AB274406 AB274412 AY422526 HM995333 L38895 Z92893 AY671484 AY671502 HM996309 DQ524158 DQ524152 AF398957 DQ523937 DQ523942 DQ523974 DQ523976 DQ524014 DQ524020 DQ524029 DQ524039 DQ524045 DQ524146 HM996397 AM233760 AM233767 AM233773 DQ926107 AF453266 AY376082 EF177971 HM995388 HM995482 HM995628 HM995630 HM995662 HM995740 HM995924 HM996182 HM996322 HM996354 HM996496 HM996514 HM996515 AB066901 AB066907 AB067286 AB067291 AB084084 AB453233 AF174055 AF174064 AF174066 AF174090 AF174108 AF174113 AF262203 AF262207 AJ244952 AJ244989 AJ245004 AJ245022 AJ245025 AJ245048 AJ245053 AJ245233 AJ245239 AJ245242 AJ389195 AJ556756 AJ556762 AJ576037 AJ579119 AJ579123 AJ579127 AJ579128 AJ579137 AJ579254 AJ579295 AJ579298 AJ579299 AY640493 AY640507 AY640551 AY670735 AY670737 AY670748 AY670776 AY670778 AY670786 AY670793 AY670807 AY670829 AY670832 AY670848 AY670852 AY670854 AY670861 AY670868 AY670869 AY670876 AY670877 AY670880 AY670887 AY670888 AY670889 AY670891 AY670901 AY670906 AY670908 AY670909 AY670917 AY670922 AY670927 AY670934 AY670936 AY670937 AY670938 AY670939 AY670941 AY670945 AY670955 AY670956 AY670957 AY670964 AY670968 AY670971 AY670979 AY670996 AY671042 AY671084 AY671098 AY671112 AY671127 AY671131 AY671137 AY671138 AY671237 AY671320 AY671325 AY671331 AY671336 AY671344 AY671367 AY671381 AY671385 AY671396 AY671397 AY671404 AY671405 AY671407 AY671408 AY671417 AY671437 AY671440 AY671442 AY671448 AY671463 AY671465 AY671467 AY671469 AY671493 AY671501 AY671506 AY671509 AY671516 AY671522 AY671524 AY671526 AY671542 AY671546 AY671547 AY671550 AY671554 AY671558 AY671559 AY671569 AY671571 AY671584 AY671588 AY671590 AY671594 AY671604 AY671607 AY671608 AY671609 AY671610 AY671611 AY671613 AY671615 AY671616 AY671621 AY671622 AY671628 AY671633 AY671636 AY671643 AY671646 AY671647 AY671649 AY671655 AY671657 AY671662 AY671667 AY671669 AY671679 AY671680 AY671683 AY671687 AY671695 AY671747 AY671768 AY671777 AY671778 AY685295 AY685305 AY685312 AY781854 AY781863 AY971061 AY971111 AY971119 DQ005266 DQ005272 DQ005280 DQ100845 DQ100896 DQ205163 DQ926078 FJ039782 FJ385308 FJ385314 FJ385395 GU570393 GU570394 HM152486 L12191 L12196 L25294 S55101 S67077 U85239 Z18320 Z70635 Z70659 AY686879 DQ535276 DQ535307 DQ535328 EF177962 FJ195498 FJ195512 HM996178 X67910 AY392946 AY392947 AY392948 AY392956 AY671265 AY671019 AY671039 AY671041 AY671259 AY671249 AY671147 AY671154 AY671178 AY671210 AY671260 AY671261 AF013620 AF062200 AF062203 AF062207 AF062220 AF062245 AF062258 AF062264 AF062272 AF174013 AF174036 AF381602 AF381610 AM233776 AM233818 AY670746 AY671066 AY671181 AY671188 AY671211 AY671693 AY671738 M26997 M99609 X52110 Z11958 Z47221 Z75400 Z75402 BC073766 J00231 BC063384 BC011857 CU680082 CU687682 Z14196 Z14194 TSC_hg19_v1_chr14_-_106478575 Z14182	10910	-	AF267814 AF267818 AY393025 M34025 DQ454568 FJ874017 FJ840306 FJ840308 FJ840341 FJ840342 FJ840347 FJ840348 FJ840351 FJ840353 FJ840354 FJ840356 FJ840361 FJ840364 FJ840365 FJ840368 FJ840373 FJ840378 FJ840401 FJ840402 FJ840404 FJ873822 FJ873825 FJ873827 FJ873829 FJ873831 FJ873832 FJ873834 FJ873841 FJ873843 FJ873845 FJ873851 FJ873852 FJ873854 FJ873856 FJ873879 FJ873880 FJ873882 FJ873889 FJ873891 FJ873893 FJ873896 FJ873900 FJ873905 FJ873906 FJ873907 FJ873908 FJ873917 FJ873919 FJ873920 FJ873927 FJ873937 FJ873944 FJ873960 FJ873973 FJ873980 FJ873983 FJ874001 FJ874004 FJ874006 FJ874007 FJ874011 FJ874012 FJ874016 FJ874021 FJ874022 FJ874032 FJ874033 FJ874035 FJ874041 FJ874060 FJ874071 FJ874092 HM116099 HM116103 HM116104 HM116108 HM116110 HM116111 HM116112 HM116124 HM116125 HM116126 HM116127 HM116132 HM116134 HM116142 HM116150 HM116151 HM116156 HM116157 HM116164 HM116171 HM116176 HM116183 HM116185 HM116186 HM116188 HM116194 HM116200 HM116203 HM116204 HM116207 HM116210 HM116211 HM116212 HM116215 HM116218 HM116224 GU552693 GQ232960 GQ232962 GQ232978 AJ008188 S75886 AJ487496 AY003819 AY994082 EU090242 EU667603 JF810259 AY393312 AY392883 AY392887 AY392891 AY392897 AY392900 AY392903 AY393023 AY393026 AY393027 AY393028 AY393029 AY393030 AY393031 AY393032 AY393033 AY393034 AY393035 AY393036 AY393037 AY393038 AY393040 AY393041 AY393042 AY393043 AY393044 AY393045 AY393046 AY393048 AY393049 AY393050 AY393051 AY393276 AY393277 AY393278 AY393283 AY393285 AY393288 AY393289 AY393290 AY393292 AY393294 AY393298 AY393299 AY393303 AY393304 AY393307 AY393310 AY393311 AY393382 AY393386 AY393390 AY393391 AY393392 AY393393 AY393406 AY393413 AY393416 AY393417 AY393418 AY393419 AY393421 AY393423 AY393435 AY393440 AY393452 AY393554 AY393555 AY393557 AY393558 AY393559 AY393564 AY393565 EU099064 EU099181 EU099246 DQ100785 JN110964 AY955064 JN110468 JN110515 JN110517 JN110539 JN110572 JN110594 JN110907 JN110984 JN110994 JN111158 JN111166 JN111205 AY062324 AM279571 AY866601 AY866658 AM279525 AM279573 AY866680 DQ100676 DQ100927 DQ100946 AM279595 AM279596 AM279599 AM279600 DQ100868 DQ926119 DQ926440 DQ926554 DQ926566 HM995527 HM995209 HM995210 HM995212 HM995214 HM995215 HM995376 HM995377 HM995380 HM995398 HM995401 HM995473 HM995528 HM995531 HM995597 HM995599 HM995814 HM995819 AB063834 AB066852 AB066861 AB066862 AB066864 AB066865 AB066866 AB066868 AB066869 AB066870 AB066871 AB066873 AB066874 AB066878 AB067185 AB067189 AB067221 AB067222 AB067223 AB067226 AB067228 AB067229 AB067231 AB067232 AB363096 AB363107 AB374193 AB374196 AB374197 AB374204 AF035018 AF062155 AF062255 AF129754 AF174046 AF174061 AF174070 AF174071 AF455551 AF460966 AY055482 AY345923 AY866550 AY866584 AY866603 AY866625 AY866961 AY941941 DQ205143 DQ490734 DQ490735 DQ490736 DQ923046 DQ926138 DQ926180 DQ926226 DQ926362 DQ926376 DQ926412 DQ926456 DQ926482 DQ926490 DQ926499 DQ926558 DQ926576 DQ926582 DQ926586 DQ926588 DQ926592 DQ926605 DQ926606 DQ926610 DQ926650 FR820874 GU570276 GU570278 GU570279 GU570280 HM152514 HQ378331 HQ378364 HQ378373 S73953 U00545 U00552 U00555 X64147 M90808 AY393141 AY393143 AY393144 AY393146 AY393147 AY393149 AY393150 X69861 AF062130 AF062268 AF062282 AY172958 S67984 X81695 Z47235 Z47237 Z47243 AK301335 TSC_hg19_v1_chr14_-_106494595 AK057617 BC092449	26939	-	AK129517|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC080557|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089412|IGHM|3507|immunoglobulin heavy constant mu##BC075840|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640724|IGHM|3507|immunoglobulin heavy constant mu##AK097348|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK126543|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640847|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073766|IGHV4-31|28396|immunoglobulin heavy variable 4-31##J00231|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC063384|IGHD|3495|immunoglobulin heavy constant delta##BC011857|IGHM|3507|immunoglobulin heavy constant mu##AK301335|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC092449|IGHA1|3493|immunoglobulin heavy constant alpha 1	4.047461	CTCF.p2:2:0.920	CTCF.p2:-36:0.911	CTCF.p2:41:0.576	CTCF.p2:60:0.334	CTCF.p2:80:0.989	CTCF.p2:-94:0.248
chr16	27983895	27984029	reg1004506.p1	14.261	+	BC016460 NM_144675	-84485	-	TSC_hg19_v1_chr16_+_27561464 NM_015202 AB011128 BC150276 BC131508	-422498	+	TSC_hg19_v1_chr16_-_27561248 NM_001520 U02619	-422693	-	TSC_hg19_v1_chr16_-_28074776 AY358206 NM_001109763	90840	-	AY026388 BC130304 BC144189 TSC_hg19_v1_chr16_-_28222816 AK123846	238823	-	TSC_hg19_v1_chr16_-_28223181 AB002368 NM_015171	239213	-	BC016460|GSG1L|146395|GSG1-like##NM_144675|GSG1L|146395|GSG1-like##NM_015202|KIAA0556|23247|KIAA0556##AB011128|KIAA0556|23247|KIAA0556##BC150276|KIAA0556|23247|KIAA0556##BC131508|KIAA0556|23247|KIAA0556##NM_001520|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##U02619|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##AY358206|GSG1L|146395|GSG1-like##NM_001109763|GSG1L|146395|GSG1-like##AY026388|XPO6|23214|exportin 6##BC130304|XPO6|23214|exportin 6##BC144189|XPO6|23214|exportin 6##AK123846|XPO6|23214|exportin 6##AB002368|XPO6|23214|exportin 6##NM_015171|XPO6|23214|exportin 6	0.994686	CTCF.p2:-6:0.753	CTCF.p2:-7:0.242
chr20	55125814	55125930	reg1003222.p1	14.261	+	BC014951 NM_001013646	-17589	+	AK131203 NM_080615	-24892	-	NM_001012971 BC029411 BC105792 BC107704 BC070179	-26069	+	TSC_hg19_v1_chr20_+_55204361 BC051829 NM_003222 AK314272 BC035664 U85658 X95693	78558	+	EU679366 AK094784 CU678997 DQ891494 DQ894685 EU176612 AB528364 CU678634 BC008584 M60316 AK312419 AK291186 TSC_hg19_v1_chr20_-_55841286 X51801	715323	-	TSC_hg19_v1_chr20_-_55841684 BC004248 NM_001719	715816	-	BC014951|FAM209B|388799|family with sequence similarity 209, member B##NM_001013646|FAM209B|388799|family with sequence similarity 209, member B##AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##NM_001012971|FAM209A|200232|family with sequence similarity 209, member A##BC029411|FAM209A|200232|family with sequence similarity 209, member A##BC105792|FAM209B|388799|family with sequence similarity 209, member B##BC107704|FAM209A|200232|family with sequence similarity 209, member A##BC070179|FAM209A|200232|family with sequence similarity 209, member A##BC051829|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##NM_003222|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##AK314272|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##BC035664|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##U85658|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##X95693|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##EU679366|BMP7|655|bone morphogenetic protein 7##AK094784|BMP7|655|bone morphogenetic protein 7##DQ891494|BMP7|655|bone morphogenetic protein 7##DQ894685|BMP7|655|bone morphogenetic protein 7##EU176612|BMP7|655|bone morphogenetic protein 7##BC008584|BMP7|655|bone morphogenetic protein 7##M60316|BMP7|655|bone morphogenetic protein 7##AK312419|BMP7|655|bone morphogenetic protein 7##AK291186|BMP7|655|bone morphogenetic protein 7##X51801|BMP7|655|bone morphogenetic protein 7##BC004248|BMP7|655|bone morphogenetic protein 7##NM_001719|BMP7|655|bone morphogenetic protein 7	0.911045	CTCF.p2:-14:0.911
chr1	155057280	155057404	reg1002975.p3	14.260	+	TSC_hg19_v1_chr1_+_155051392 BC017722 NM_004952 BC110406 U14187 AK296030 AK316248 L37360 DQ891668 DQ894854	-6002	+	TSC_hg19_v1_chr1_+_155036206 NM_005227 NM_182689 NM_182690 BC107483 AK301966 AJ006352 AJ006353 U14188 CR533569	-21092	+	TSC_hg19_v1_chr1_+_155023819 AK308172 AK295614 AK296925 AK297468 U41767 EU176173 AB590397 AY518542 BT009764 U46005	-33506	+	AK057845 TSC_hg19_v1_chr1_+_155099946	42599	+	AK313117 NM_004428 NM_182685 TSC_hg19_v1_chr1_+_155100351 AK289589 AK308965 AL833641 AK311677 BC032698 BC095432 M57730 CR457416 DQ890722 DQ893900	43036	+	TSC_hg19_v1_chr1_+_155108327 AK289551 NM_001122837 NM_001122839 NM_018845 AF126023 BC009621 AF126024 BC012378	50967	+	BC017722|EFNA3|1944|ephrin-A3##NM_004952|EFNA3|1944|ephrin-A3##BC110406|EFNA3|1944|ephrin-A3##U14187|EFNA3|1944|ephrin-A3##AK296030|EFNA3|1944|ephrin-A3##AK316248|EFNA3|1944|ephrin-A3##L37360|EFNA3|1944|ephrin-A3##DQ891668|EFNA3|1944|ephrin-A3##DQ894854|EFNA3|1944|ephrin-A3##NM_005227|EFNA4|1945|ephrin-A4##NM_182689|EFNA4|1945|ephrin-A4##NM_182690|EFNA4|1945|ephrin-A4##BC107483|EFNA4|1945|ephrin-A4##AJ006352|EFNA4|1945|ephrin-A4##AJ006353|EFNA4|1945|ephrin-A4##U14188|EFNA4|1945|ephrin-A4##CR533569|EFNA4|1945|ephrin-A4##AK308172|ADAM15|8751|ADAM metallopeptidase domain 15##AK295614|ADAM15|8751|ADAM metallopeptidase domain 15##AK296925|ADAM15|8751|ADAM metallopeptidase domain 15##AK297468|ADAM15|8751|ADAM metallopeptidase domain 15##U41767|ADAM15|8751|ADAM metallopeptidase domain 15##EU176173|ADAM15|8751|ADAM metallopeptidase domain 15##AY518542|ADAM15|8751|ADAM metallopeptidase domain 15##BT009764|ADAM15|8751|ADAM metallopeptidase domain 15##U46005|ADAM15|8751|ADAM metallopeptidase domain 15##AK057845|EFNA1|1942|ephrin-A1##AK313117|EFNA1|1942|ephrin-A1##NM_004428|EFNA1|1942|ephrin-A1##NM_182685|EFNA1|1942|ephrin-A1##AK289589|EFNA1|1942|ephrin-A1##AL833641|EFNA1|1942|ephrin-A1##BC032698|EFNA1|1942|ephrin-A1##BC095432|EFNA1|1942|ephrin-A1##M57730|EFNA1|1942|ephrin-A1##CR457416|EFNA1|1942|ephrin-A1##DQ890722|EFNA1|1942|ephrin-A1##DQ893900|EFNA1|1942|ephrin-A1##AK289551|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122837|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122839|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_018845|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126023|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC009621|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126024|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC012378|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	0.999632	CTCF.p2:-2:1.000
chr1	160163015	160163122	reg1002248.p1	14.260	+	NM_001231 AK300713 AK313250 BC022289 S73775	-2722	+	BC028297 NM_001001734	-15868	+	NM_144699 AF506797 BC068570 BC036052 BX647234 AL833335 AK308286 BC094801	-41693	+	TSC_hg19_v1_chr1_+_160175124 NM_003768 BC022554	12061	+	TSC_hg19_v1_chr1_+_160175173 AK311762 AK095879 X86809 BC002426 Y13736	12129	+	BC111063 BC013107 TSC_hg19_v1_chr1_-_160232242 AK026481 AK312690 CR749801	69160	-	NM_001231|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##AK300713|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##AK313250|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##BC022289|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##S73775|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##BC028297|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##NM_001001734|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##NM_144699|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AF506797|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC068570|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC036052|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BX647234|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AL833335|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AK308286|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC094801|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##NM_003768|PEA15|8682|phosphoprotein enriched in astrocytes 15##BC022554|PEA15|8682|phosphoprotein enriched in astrocytes 15##AK311762|PEA15|8682|phosphoprotein enriched in astrocytes 15##AK095879|PEA15|8682|phosphoprotein enriched in astrocytes 15##X86809|PEA15|8682|phosphoprotein enriched in astrocytes 15##BC002426|PEA15|8682|phosphoprotein enriched in astrocytes 15##Y13736|PEA15|8682|phosphoprotein enriched in astrocytes 15##BC111063|DCAF8|50717|DDB1 and CUL4 associated factor 8##BC013107|DCAF8|50717|DDB1 and CUL4 associated factor 8##AK026481|DCAF8|50717|DDB1 and CUL4 associated factor 8##AK312690|DCAF8|50717|DDB1 and CUL4 associated factor 8##CR749801|DCAF8|50717|DDB1 and CUL4 associated factor 8	0.999739	CTCF.p2:-10:1.000
chr2	153492303	153492418	reg1003584.p1	14.260	+	BC113878 BC114438 TSC_hg19_v1_chr2_+_153191857 AB067489 BC167159 AB385514	-300387	+	TSC_hg19_v1_chr2_+_153191687 NM_052905	-300690	+	TSC_hg19_v1_chr2_-_153032266 AB463258 AM393419 CU688564 DQ892427 DQ895641 AK292265 AK292847 AK310863 AF042273 AF042274 AL133600 BC022277 BC028740 NM_005843	-460010	-	TSC_hg19_v1_chr2_-_153573924 U70667 AF049524 AF049528 BC000273 BC073138 BC011788 AF049523 AK298547 AK024810 BC029414 NM_017892	81560	-	TSC_hg19_v1_chr2_+_153574392 NM_152522 AK023109	82088	+	TSC_hg19_v1_chr2_+_153575123 AK315657	82755	+	BC113878|FMNL2|114793|formin-like 2##BC114438|FMNL2|114793|formin-like 2##AB067489|FMNL2|114793|formin-like 2##BC167159|FMNL2|114793|formin-like 2##NM_052905|FMNL2|114793|formin-like 2##AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_152522|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK023109|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK315657|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6	0.998941	CTCF.p2:11:0.999
chr12	108851112	108851268	reg1004136.p1	14.258	+	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	-118106	-	NM_001142345	-136752	-	BC110330 AB018332 NM_014653	-327703	+	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	57892	+	AB385287 D63879 TSC_hg19_v1_chr12_-_108954936 BC103706 BC093784 BC111983 BC143253 BC004547 BC024279 AB020880 AF387506 BC032601	103744	-	TSC_hg19_v1_chr12_-_108954945 AK225174 AK304834	103756	-	U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing##D63879|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC103706|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC093784|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC111983|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC143253|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC004547|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC024279|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AB020880|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AF387506|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC032601|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK225174|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK304834|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3	0.582957	CTCF.p2:22:0.583
chr19	49291532	49291645	reg1003431.p1	14.258	+	AY359086 NM_019113 AB021975 AB590410 DQ891786 DQ894970	-32170	+	D87935 D87936 D87937 NM_000148	-32942	-	AB195682 BC034769 NM_182575 AK301750	-41493	-	AK310243 U68418 CU674922 DQ892350 DQ895554 AF268047 AF268048 TSC_hg19_v1_chr19_-_49314287 BC001900 AK093627 AK309428 AK223522 AK310101 AK314548 NM_001164773 NM_001190	22660	-	AB528622 CU675337 TSC_hg19_v1_chr19_-_49339769 BC006283 BC006294 AK307437 AF126781	48186	-	TSC_hg19_v1_chr19_-_49339923 NM_016246	48335	-	AY359086|FGF21|26291|fibroblast growth factor 21##NM_019113|FGF21|26291|fibroblast growth factor 21##AB021975|FGF21|26291|fibroblast growth factor 21##DQ891786|FGF21|26291|fibroblast growth factor 21##DQ894970|FGF21|26291|fibroblast growth factor 21##D87935|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##D87936|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##D87937|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##NM_000148|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##AB195682|IZUMO1|284359|izumo sperm-egg fusion 1##BC034769|IZUMO1|284359|izumo sperm-egg fusion 1##NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1##AK301750|IZUMO1|284359|izumo sperm-egg fusion 1##AK310243|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##U68418|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##DQ892350|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##DQ895554|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AF268047|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AF268048|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##BC001900|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK093627|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK309428|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK223522|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK310101|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK314548|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##NM_001164773|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##NM_001190|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##BC006283|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##BC006294|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AK307437|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AF126781|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##NM_016246|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14	0.997288	CTCF.p2:-16:0.997
chr4	185185421	185185573	reg1002743.p2	14.258	+	BC035035 AY358676 AK057370 NM_153343	-46432	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-357586	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-357677	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	210184	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	385104	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	385336	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.997761	CTCF.p2:-17:0.998
chr22	46710301	46710405	reg1002388.p2	14.257	+	NM_016426 BC075828 AK303087 AK025563 AK222806 AK315550 TSC_hg19_v1_chr22_+_46692850	-17598	+	TSC_hg19_v1_chr22_+_46663916 AK000706 BC018918 CU676334	-46438	+	TSC_hg19_v1_chr22_+_46663880 NM_017931 AK300606	-46495	+	NM_018006 AY062123 DQ309998 DQ309999 DQ310000	20956	+	TSC_hg19_v1_chr22_+_46731615 AB178028 AK001002 AK295173 AK290712 BC066593 BC080631 CR456445 BC027991 BC012076 AB463324 CU013043 CU013331	21276	+	TSC_hg19_v1_chr22_+_46731810 AK303020	21457	+	NM_016426|GTSE1|51512|G-2 and S-phase expressed 1##BC075828|GTSE1|51512|G-2 and S-phase expressed 1##AK303087|GTSE1|51512|G-2 and S-phase expressed 1##AK025563|GTSE1|51512|G-2 and S-phase expressed 1##AK222806|GTSE1|51512|G-2 and S-phase expressed 1##AK315550|GTSE1|51512|G-2 and S-phase expressed 1##AK000706|TTC38|55020|tetratricopeptide repeat domain 38##BC018918|TTC38|55020|tetratricopeptide repeat domain 38##NM_017931|TTC38|55020|tetratricopeptide repeat domain 38##AK300606|TTC38|55020|tetratricopeptide repeat domain 38##NM_018006|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AY062123|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ309998|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ309999|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ310000|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AB178028|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK001002|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK295173|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK290712|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC066593|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC080631|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456445|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC027991|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC012076|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013043|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013331|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK303020|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	0.991957	CTCF.p2:5:0.992
chr2	88969279	88969404	reg1003640.p1	14.257	+	AF110146 BC126354 BC126356 AK128659 TSC_hg19_v1_chr2_-_88926983 AK315287 AF193339 NM_004836	-42363	-	AK058098 NM_152670 BC029522	-145157	+	NM_001135649	-217289	-	TSC_hg19_v1_chr2_+_88991190 NM_144563 AY050633 BC015529	21874	+	BX648045 TSC_hg19_v1_chr2_+_89065391 AL137717 BC031698	96060	+	S49006 TSC_hg19_v1_chr2_-_89165772	196371	-	AF110146|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126354|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126356|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK128659|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK315287|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AF193339|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##NM_004836|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK058098|C2orf51|200523|chromosome 2 open reading frame 51##NM_152670|C2orf51|200523|chromosome 2 open reading frame 51##BC029522|C2orf51|200523|chromosome 2 open reading frame 51##NM_001135649|FOXI3|344167|forkhead box I3##NM_144563|RPIA|22934|ribose 5-phosphate isomerase A##AY050633|RPIA|22934|ribose 5-phosphate isomerase A##BC015529|RPIA|22934|ribose 5-phosphate isomerase A##BX648045|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AL137717|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##BC031698|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2	0.826575	CTCF.p2:6:0.812
chr1	166879759	166879884	reg1003723.p1	14.256	+	TSC_hg19_v1_chr1_-_166845533 AK291922 NM_053053	-34228	-	AB590621 EU446601 AK290964 TSC_hg19_v1_chr1_-_166845502 BC015401 AK309250	-34323	-	TSC_hg19_v1_chr1_+_166808734 AB040946 NM_017542 AK056711 BC131624	-71076	+	AB527117 AF503509 NM_199351 TSC_hg19_v1_chr1_-_166944658	64861	-	TSC_hg19_v1_chr1_+_166944753 GU383114	64963	+	TSC_hg19_v1_chr1_+_166958503 AK302253 AK131066 DQ076156 GU383113 AK027810 NM_032858 BC028595 AB590622 CU688524	78721	+	AK291922|TADA1|117143|transcriptional adaptor 1##NM_053053|TADA1|117143|transcriptional adaptor 1##EU446601|TADA1|117143|transcriptional adaptor 1##AK290964|TADA1|117143|transcriptional adaptor 1##BC015401|TADA1|117143|transcriptional adaptor 1##AK309250|TADA1|117143|transcriptional adaptor 1##AB040946|POGK|57645|pogo transposable element with KRAB domain##NM_017542|POGK|57645|pogo transposable element with KRAB domain##AK056711|POGK|57645|pogo transposable element with KRAB domain##BC131624|POGK|57645|pogo transposable element with KRAB domain##AF503509|ILDR2|387597|immunoglobulin-like domain containing receptor 2##NM_199351|ILDR2|387597|immunoglobulin-like domain containing receptor 2##GU383114|MAEL|84944|maelstrom homolog (Drosophila)##AK302253|MAEL|84944|maelstrom homolog (Drosophila)##AK131066|MAEL|84944|maelstrom homolog (Drosophila)##DQ076156|MAEL|84944|maelstrom homolog (Drosophila)##GU383113|MAEL|84944|maelstrom homolog (Drosophila)##AK027810|MAEL|84944|maelstrom homolog (Drosophila)##NM_032858|MAEL|84944|maelstrom homolog (Drosophila)##BC028595|MAEL|84944|maelstrom homolog (Drosophila)	0.311845	CTCF.p2:-20:0.312
chr6	132621622	132621747	reg1003193.p1	14.255	+	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	-349270	-	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-492423	+	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	-492523	+	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	100932	-	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	212566	-	BC069083 NM_175057 AY183469	237743	+	BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7##BC069083|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##NM_175057|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183469|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)	0.974984	CTCF.p2:-21:0.975
chr10	106065438	106065560	reg1003694.p1	14.253	+	BC046194 NM_001191014 NM_001191015 BC023583 AK297522	-30595	+	AK300508 AK296266 TSC_hg19_v1_chr10_+_106034669 CU691188 AY191318	-30837	+	TSC_hg19_v1_chr10_+_106028947 AY209189 AY350731 AK291886	-36558	+	BC070108 NM_033397	28163	-	AB051541 TSC_hg19_v1_chr10_-_106098200 AK129877	32690	-	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	48042	+	BC046194|GSTO2|119391|glutathione S-transferase omega 2##NM_001191014|GSTO2|119391|glutathione S-transferase omega 2##NM_001191015|GSTO2|119391|glutathione S-transferase omega 2##BC023583|GSTO2|119391|glutathione S-transferase omega 2##AK297522|GSTO2|119391|glutathione S-transferase omega 2##AK300508|GSTO2|119391|glutathione S-transferase omega 2##AK296266|GSTO2|119391|glutathione S-transferase omega 2##AY191318|GSTO2|119391|glutathione S-transferase omega 2##AY209189|GSTO2|119391|glutathione S-transferase omega 2##AY350731|GSTO2|119391|glutathione S-transferase omega 2##AK291886|GSTO2|119391|glutathione S-transferase omega 2##BC070108|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##NM_033397|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##AB051541|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147	0.40764	CTCF.p2:0:0.408
chr3	124620286	124620398	reg1002660.p1	14.251	+	TSC_hg19_v1_chr3_-_124606213 BC006541 NM_002213 X53002	-14131	-	TSC_hg19_v1_chr3_-_124605863 AB587397 DQ892778 DQ896025 M35011 AK315429 J05633	-14476	-	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	-171026	+	AF286113 AB035807 AY358831 TSC_hg19_v1_chr3_-_124653596 NM_033049	33241	-	BC067235 TSC_hg19_v1_chr3_-_124732404	112050	-	AB384586 NM_020733 TSC_hg19_v1_chr3_-_124774842	154458	-	BC006541|ITGB5|3693|integrin, beta 5##NM_002213|ITGB5|3693|integrin, beta 5##X53002|ITGB5|3693|integrin, beta 5##DQ892778|ITGB5|3693|integrin, beta 5##DQ896025|ITGB5|3693|integrin, beta 5##M35011|ITGB5|3693|integrin, beta 5##AK315429|ITGB5|3693|integrin, beta 5##J05633|ITGB5|3693|integrin, beta 5##AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase##AF286113|MUC13|56667|mucin 13, cell surface associated##AB035807|MUC13|56667|mucin 13, cell surface associated##AY358831|MUC13|56667|mucin 13, cell surface associated##NM_033049|MUC13|56667|mucin 13, cell surface associated##BC067235|HEG1|57493|HEG homolog 1 (zebrafish)##NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)	0.982676	CTCF.p2:3:0.983
chr6	11575878	11576006	reg1003768.p1	14.251	+	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-37444	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-193402	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-343032	-	NM_001143948 NM_032744	203337	-	NM_002114	436781	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	714651	+	NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.986578	CTCF.p2:10:0.987
chr5	113785680	113785816	reg1003678.p1	14.249	+	BC015371 NM_170775 BC040722	-16499	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	-87287	+	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	-87699	+	TSC_hg19_v1_chr5_-_114505606 AK316422 AK296389	719856	-	AB196558 AJ272269 BC130334 AK125426 BC045164 BC046096 NM_001017397 NM_001017398 NM_018700	730239	-	AY780790 AB590094 TSC_hg19_v1_chr5_-_114598563 NM_005023	812818	-	BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK316422|TRIM36|55521|tripartite motif containing 36##AK296389|TRIM36|55521|tripartite motif containing 36##AB196558|TRIM36|55521|tripartite motif containing 36##AJ272269|TRIM36|55521|tripartite motif containing 36##BC130334|TRIM36|55521|tripartite motif containing 36##AK125426|TRIM36|55521|tripartite motif containing 36##BC045164|TRIM36|55521|tripartite motif containing 36##BC046096|TRIM36|55521|tripartite motif containing 36##NM_001017397|TRIM36|55521|tripartite motif containing 36##NM_001017398|TRIM36|55521|tripartite motif containing 36##NM_018700|TRIM36|55521|tripartite motif containing 36##AY780790|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##NM_005023|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit	0.981915	CTCF.p2:26:0.982
chr17	40580556	40580683	reg1003658.p1	14.248	+	AB464659 TSC_hg19_v1_chr17_-_40575275 BC008849 AK298072 AK074512 AK092406 AK298563 AK314389 AX747528 BC066123 NM_012232	-5392	-	TSC_hg19_v1_chr17_-_40540580 AK291933	-40027	-	TSC_hg19_v1_chr17_-_40540493 L29277 NM_003150 NM_139276 AK301200 AK316139	-40087	-	TSC_hg19_v1_chr17_+_40610864 L78933 NM_001130020 NM_001130021 NM_005177 Z71460	30244	+	BC017826 TSC_hg19_v1_chr17_+_40610895 AK223554 AK299784	30266	+	AK316305 TSC_hg19_v1_chr17_+_40610897	30278	+	BC008849|PTRF|284119|polymerase I and transcript release factor##AK298072|PTRF|284119|polymerase I and transcript release factor##AK074512|PTRF|284119|polymerase I and transcript release factor##AK092406|PTRF|284119|polymerase I and transcript release factor##AK298563|PTRF|284119|polymerase I and transcript release factor##AK314389|PTRF|284119|polymerase I and transcript release factor##BC066123|PTRF|284119|polymerase I and transcript release factor##NM_012232|PTRF|284119|polymerase I and transcript release factor##AK291933|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##L29277|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_003150|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_139276|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK301200|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK316139|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##L78933|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_001130020|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_001130021|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_005177|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##Z71460|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##BC017826|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK223554|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK299784|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK316305|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1	0.09058	
chr2	88890680	88890817	reg1003910.p1	14.248	+	AK058098 NM_152670 BC029522	-66564	+	NM_001135649	-138696	-	NM_018271 BC050699 BC035315 AK001778	-417992	+	AF110146 BC126354 BC126356 AK128659 TSC_hg19_v1_chr2_-_88926983 AK315287 AF193339 NM_004836	36230	-	TSC_hg19_v1_chr2_+_88991190 NM_144563 AY050633 BC015529	100467	+	BX648045 TSC_hg19_v1_chr2_+_89065391 AL137717 BC031698	174653	+	AK058098|C2orf51|200523|chromosome 2 open reading frame 51##NM_152670|C2orf51|200523|chromosome 2 open reading frame 51##BC029522|C2orf51|200523|chromosome 2 open reading frame 51##NM_001135649|FOXI3|344167|forkhead box I3##NM_018271|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC050699|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC035315|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK001778|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AF110146|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126354|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126356|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK128659|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK315287|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AF193339|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##NM_004836|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##NM_144563|RPIA|22934|ribose 5-phosphate isomerase A##AY050633|RPIA|22934|ribose 5-phosphate isomerase A##BC015529|RPIA|22934|ribose 5-phosphate isomerase A##BX648045|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AL137717|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##BC031698|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2	0.311111	CTCF.p2:-16:0.311
chr17	48217355	48217483	reg1004476.p1	14.247	+	TSC_hg19_v1_chr17_-_48207145 BC142728 BC136485 AY148482 NM_174920 AK291482 AK094209 AK225767 BC141822	-10270	-	TSC_hg19_v1_chr17_+_48172739 NM_001199900 NM_002611 AK297089 BC040478 BC063137 AK290522 AK293600 BC005811 L42451 NM_001199899	-44609	+	AK055119 NM_001199898	-45319	+	AJ401189 NM_032595 TSC_hg19_v1_chr17_-_48227977	10507	-	AK300710 TSC_hg19_v1_chr17_+_48243372 L34355 L35853 L46810 NM_000023 NM_001135697 AK293614 AK290622 BC025702 U08895 AB464188 DQ893777 CU693018	25963	+	TSC_hg19_v1_chr17_+_48262817 CU691369	45420	+	BC142728|SAMD14|201191|sterile alpha motif domain containing 14##BC136485|SAMD14|201191|sterile alpha motif domain containing 14##AY148482|SAMD14|201191|sterile alpha motif domain containing 14##NM_174920|SAMD14|201191|sterile alpha motif domain containing 14##AK291482|SAMD14|201191|sterile alpha motif domain containing 14##AK094209|SAMD14|201191|sterile alpha motif domain containing 14##AK225767|SAMD14|201191|sterile alpha motif domain containing 14##BC141822|SAMD14|201191|sterile alpha motif domain containing 14##NM_001199900|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_002611|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK297089|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC040478|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC063137|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK290522|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK293600|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC005811|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##L42451|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199899|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK055119|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199898|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AJ401189|PPP1R9B|84687|protein phosphatase 1, regulatory subunit 9B##NM_032595|PPP1R9B|84687|protein phosphatase 1, regulatory subunit 9B##AK300710|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L34355|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L35853|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L46810|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##NM_000023|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##NM_001135697|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##AK290622|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##BC025702|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##U08895|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##DQ893777|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)	0.998047	CTCF.p2:0:0.998
chr6	26097623	26097757	reg1003102.p2	14.246	+	U60319 AJ249335 AJ249336 AJ249337 AJ249338 AJ250635 NM_000410 NM_139003 NM_139004 NM_139006 NM_139007 NM_139008 NM_139009 NM_139010 NM_139011 AF144242 AF144243 AF144244 AF144245 BC074721 AF149804 AF150664 TSC_hg19_v1_chr6_+_26087639 AF079407 AF079408 AF079409 BC117201 BC117203 BC143887 AK293393 AK316502 AF115265 AF115264 AK300933 HQ258197 JN375754	-10113	+	TSC_hg19_v1_chr6_-_26056699 AB451259 AB451385 EU446960 EU832089 EU832181 AB590706 CU678090 BC002649 AK290947 D28457 NM_005319	-41014	-	BC058834 TSC_hg19_v1_chr6_+_26045611 BC127610 NM_003531	-52062	+	BC130558 BC130560 TSC_hg19_v1_chr6_+_26104160 AB590707 EU446977 HQ258693 NM_003542	6449	+	EU446962 HQ258096 BC130350 BC069517 CU686878 NM_005323 TSC_hg19_v1_chr6_-_26108364	10652	-	BC106899 EU446968 NM_003526 TSC_hg19_v1_chr6_-_26124155 BC009612 BC105595 AK312096	26459	-	U60319|HFE|3077|hemochromatosis##AJ249335|HFE|3077|hemochromatosis##AJ249336|HFE|3077|hemochromatosis##AJ249337|HFE|3077|hemochromatosis##AJ249338|HFE|3077|hemochromatosis##AJ250635|HFE|3077|hemochromatosis##NM_000410|HFE|3077|hemochromatosis##NM_139003|HFE|3077|hemochromatosis##NM_139004|HFE|3077|hemochromatosis##NM_139006|HFE|3077|hemochromatosis##NM_139007|HFE|3077|hemochromatosis##NM_139008|HFE|3077|hemochromatosis##NM_139009|HFE|3077|hemochromatosis##NM_139010|HFE|3077|hemochromatosis##NM_139011|HFE|3077|hemochromatosis##AF144242|HFE|3077|hemochromatosis##AF144243|HFE|3077|hemochromatosis##AF144244|HFE|3077|hemochromatosis##AF144245|HFE|3077|hemochromatosis##BC074721|HFE|3077|hemochromatosis##AF149804|HFE|3077|hemochromatosis##AF150664|HFE|3077|hemochromatosis##AF079407|HFE|3077|hemochromatosis##AF079408|HFE|3077|hemochromatosis##AF079409|HFE|3077|hemochromatosis##BC117201|HFE|3077|hemochromatosis##BC117203|HFE|3077|hemochromatosis##BC143887|HFE|3077|hemochromatosis##AK293393|HFE|3077|hemochromatosis##AK316502|HFE|3077|hemochromatosis##AF115265|HFE|3077|hemochromatosis##AF115264|HFE|3077|hemochromatosis##AK300933|HFE|3077|hemochromatosis##HQ258197|HFE|3077|hemochromatosis##JN375754|HFE|3077|hemochromatosis##AB451259|HIST1H1C|3006|histone cluster 1, H1c##AB451385|HIST1H1C|3006|histone cluster 1, H1c##EU446960|HIST1H1C|3006|histone cluster 1, H1c##EU832089|HIST1H1C|3006|histone cluster 1, H1c##EU832181|HIST1H1C|3006|histone cluster 1, H1c##BC002649|HIST1H1C|3006|histone cluster 1, H1c##AK290947|HIST1H1C|3006|histone cluster 1, H1c##NM_005319|HIST1H1C|3006|histone cluster 1, H1c##BC058834|HIST1H3C|8352|histone cluster 1, H3c##BC127610|HIST1H3C|8352|histone cluster 1, H3c##NM_003531|HIST1H3C|8352|histone cluster 1, H3c##BC130558|HIST1H4C|8364|histone cluster 1, H4c##BC130560|HIST1H4C|8364|histone cluster 1, H4c##EU446977|HIST1H4C|8364|histone cluster 1, H4c##HQ258693|HIST2H4B|554313|histone cluster 2, H4b##NM_003542|HIST1H4C|8364|histone cluster 1, H4c##EU446962|HIST1H1T|3010|histone cluster 1, H1t##HQ258096|HIST1H1T|3010|histone cluster 1, H1t##BC130350|HIST1H1T|3010|histone cluster 1, H1t##BC069517|HIST1H1T|3010|histone cluster 1, H1t##NM_005323|HIST1H1T|3010|histone cluster 1, H1t##BC106899|HIST1H2BC|8347|histone cluster 1, H2bc##EU446968|HIST1H2BG|8339|histone cluster 1, H2bg##NM_003526|HIST1H2BC|8347|histone cluster 1, H2bc##BC009612|HIST1H2BC|8347|histone cluster 1, H2bc##BC105595|HIST1H2BC|8347|histone cluster 1, H2bc	0.996154	CTCF.p2:7:0.996
chr8	8023185	8023306	reg1003802.p1	14.246	+	AK292586 NM_001193630	-239387	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-271041	+	AF295370 AJ237673 NM_018661 AB037972 AB590071 AF217245 AF516673	-284320	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	62897	+	TSC_hg19_v1_chr8_-_8175862 AF075060	152643	-	AK122582 NM_001080826	215977	-	AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF295370|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2	0.998481	CTCF.p2:0:0.998
chr16	18771331	18771474	reg1004523.p1	14.245	+	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	-198011	-	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	-1206597	-	TSC_hg19_v1_chr16_+_16326508 AB463143	-2444872	+	TSC_hg19_v1_chr16_-_18798077 AK127316	26694	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	30253	-	AK301636 CU679669 TSC_hg19_v1_chr16_-_18812870 BC010281 D31885 NM_015161 AK291137 AK308092 BX648446 AK300825 AK300869 AK307315	41380	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a##AK301636|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BC010281|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##D31885|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##NM_015161|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK291137|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK308092|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BX648446|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK300825|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK300869|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK307315|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1	0.756009	CTCF.p2:3:0.756
chr17	56394891	56395012	reg1002734.p1	14.244	+	J02694 X04876 M19507 NM_000250 TSC_hg19_v1_chr17_-_56358297	-36652	-	TSC_hg19_v1_chr17_-_56358164 BC130476	-36786	-	HQ258645 S56200 TSC_hg19_v1_chr17_-_56358145	-36819	-	AB014512 BC150279 NM_004758 NM_024418	11184	-	TSC_hg19_v1_chr17_+_56406294 AK311311 AK311208	11383	+	AX721088 TSC_hg19_v1_chr17_-_56409882	14926	-	J02694|MPO|4353|myeloperoxidase##X04876|MPO|4353|myeloperoxidase##M19507|MPO|4353|myeloperoxidase##NM_000250|MPO|4353|myeloperoxidase##BC130476|MPO|4353|myeloperoxidase##HQ258645|MPO|4353|myeloperoxidase##S56200|MPO|4353|myeloperoxidase##AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##AK311311|LOC100506779|100506779|uncharacterized LOC100506779##AK311208|LOC100506779|100506779|uncharacterized LOC100506779	0.978033	CTCF.p2:-22:0.792
chr16	77618254	77618382	reg1003982.p1	14.243	+	AK293831 BC063283 NM_199355	-149348	-	NM_001129979 TSC_hg19_v1_chr16_+_77233375	-384957	+	AF442486 AB463127 TSC_hg19_v1_chr16_+_77225481	-392893	+	NM_001105663 NM_001243657 NM_001243660 NM_001243661 TSC_hg19_v1_chr16_+_77756410 AK296963 EU981826	138115	+	TSC_hg19_v1_chr16_+_77822482 AK290153 BC033537 NM_020927 AB046796 CU689646	204171	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	438132	+	AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like##AF442486|MON1B|22879|MON1 homolog B (yeast)##NM_001105663|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243657|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243660|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243661|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK296963|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##EU981826|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK290153|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##BC033537|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_020927|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AB046796|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A	0.989424	CTCF.p2:7:0.989
chr22	30484994	30485144	reg1003026.p1	14.243	+	BC030013 NM_152510	-8617	+	BC142713 TSC_hg19_v1_chr22_+_30279201 AB002369 BC152455	-205808	+	TSC_hg19_v1_chr22_+_30279167 BC151217 AK289581 NM_021090 NM_153050 NM_153051	-205940	+	AB527710 X13967 BC093733 BC093735 BC143305 BC069540 TSC_hg19_v1_chr22_-_30642749 AK315310 NM_002309	157670	-	CR541703 AB463155 CU013134 CU013422 DQ892537 DQ895748 CR456534 BC011589 NM_020530 TSC_hg19_v1_chr22_-_30662841	177746	-	CU013000 CU013288 CU692418 AB528172 BC021927 AK309436 AK055587 TSC_hg19_v1_chr22_-_30685566 CR456449 AK310246 NM_001037666	200481	-	BC030013|HORMAD2|150280|HORMA domain containing 2##NM_152510|HORMAD2|150280|HORMA domain containing 2##BC142713|MTMR3|8897|myotubularin related protein 3##AB002369|MTMR3|8897|myotubularin related protein 3##BC152455|MTMR3|8897|myotubularin related protein 3##BC151217|MTMR3|8897|myotubularin related protein 3##AK289581|MTMR3|8897|myotubularin related protein 3##NM_021090|MTMR3|8897|myotubularin related protein 3##NM_153050|MTMR3|8897|myotubularin related protein 3##NM_153051|MTMR3|8897|myotubularin related protein 3##X13967|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093733|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093735|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC143305|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC069540|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AK315310|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##NM_002309|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##CR541703|OSM|5008|oncostatin M##CU013134|OSM|5008|oncostatin M##CU013422|OSM|5008|oncostatin M##DQ892537|OSM|5008|oncostatin M##DQ895748|OSM|5008|oncostatin M##CR456534|OSM|5008|oncostatin M##BC011589|OSM|5008|oncostatin M##NM_020530|OSM|5008|oncostatin M##CU013000|GATSL3|652968|GATS protein-like 3##CU013288|GATSL3|652968|GATS protein-like 3##BC021927|GATSL3|652968|GATS protein-like 3##AK309436|GATSL3|652968|GATS protein-like 3##AK055587|GATSL3|652968|GATS protein-like 3##CR456449|GATSL3|652968|GATS protein-like 3##AK310246|GATSL3|652968|GATS protein-like 3##NM_001037666|GATSL3|652968|GATS protein-like 3	1.001836	CTCF.p2:41:0.945
chr14	21482972	21483104	reg1004274.p1	14.242	+	NM_014579 AK314974 AF186081 D83039 BC096723 BC098254 BC098274 BC110057 AB527985	-15529	+	TSC_hg19_v1_chr14_+_21458138 AF321002 AK024512 AK303484 AK304180 AK315999 BC005053 AB590821 CU674975	-24892	+	NM_001029991 NM_022734	-25074	+	AK096999 TSC_hg19_v1_chr14_-_21493221 CR749252 BX647748 AF087872 AK024521 AK090657 AK130029 AX746561 AK057843 AK057847 NM_201538 NM_201539 NM_201540 NM_201541	10158	-	AF159092 AB033074 TSC_hg19_v1_chr14_-_21493869 BC010458 BC011240	10838	-	BC093038 TSC_hg19_v1_chr14_-_21493912 AF304051 NM_016250 NM_201535 NM_201536 NM_201537	10884	-	NM_014579|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##AK314974|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##AF186081|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##D83039|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##BC096723|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##BC098254|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##BC098274|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##BC110057|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##AF321002|METTL17|64745|methyltransferase like 17##AK024512|METTL17|64745|methyltransferase like 17##AK303484|METTL17|64745|methyltransferase like 17##AK304180|METTL17|64745|methyltransferase like 17##AK315999|METTL17|64745|methyltransferase like 17##BC005053|METTL17|64745|methyltransferase like 17##NM_001029991|METTL17|64745|methyltransferase like 17##NM_022734|METTL17|64745|methyltransferase like 17##AK096999|NDRG2|57447|NDRG family member 2##CR749252|NDRG2|57447|NDRG family member 2##BX647748|NDRG2|57447|NDRG family member 2##AF087872|NDRG2|57447|NDRG family member 2##AK024521|NDRG2|57447|NDRG family member 2##AK090657|NDRG2|57447|NDRG family member 2##AK130029|NDRG2|57447|NDRG family member 2##AK057843|NDRG2|57447|NDRG family member 2##AK057847|NDRG2|57447|NDRG family member 2##NM_201538|NDRG2|57447|NDRG family member 2##NM_201539|NDRG2|57447|NDRG family member 2##NM_201540|NDRG2|57447|NDRG family member 2##NM_201541|NDRG2|57447|NDRG family member 2##AF159092|NDRG2|57447|NDRG family member 2##AB033074|NDRG2|57447|NDRG family member 2##BC010458|NDRG2|57447|NDRG family member 2##BC011240|NDRG2|57447|NDRG family member 2##BC093038|NDRG2|57447|NDRG family member 2##AF304051|NDRG2|57447|NDRG family member 2##NM_016250|NDRG2|57447|NDRG family member 2##NM_201535|NDRG2|57447|NDRG family member 2##NM_201536|NDRG2|57447|NDRG family member 2##NM_201537|NDRG2|57447|NDRG family member 2	0.998328	CTCF.p2:-9:0.998
chr5	33436124	33436238	reg1003472.p1	14.241	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	-724376	+	AK290870 NM_000908 NM_001204375 M59305	-724693	+	NM_001204376 AK300094 AK308301	-725431	+	AK292346 TSC_hg19_v1_chr5_+_33440874 NM_152295	4675	+	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	4958	+	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	455864	-	BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK292346|TARS|6897|threonyl-tRNA synthetase##NM_152295|TARS|6897|threonyl-tRNA synthetase##AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	0.992976	CTCF.p2:-10:0.993
chr1	32059718	32059847	reg1004255.p1	14.240	+	AK027839 TSC_hg19_v1_chr1_+_32050592	-9228	+	NM_001204415 TSC_hg19_v1_chr1_+_32043786	-16015	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	-17640	+	BC035686 AK290521 NM_001525	23511	+	CR542139 CU678186 CU680360 BC002773 AK301226 TSC_hg19_v1_chr1_-_32110478 AB018357 AB026628 BC012561 AY359011 AK001420	50693	-	NM_012392	51055	-	AK027839|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_001204415|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC035686|HCRTR1|3061|hypocretin (orexin) receptor 1##AK290521|HCRTR1|3061|hypocretin (orexin) receptor 1##NM_001525|HCRTR1|3061|hypocretin (orexin) receptor 1##CR542139|PEF1|553115|penta-EF-hand domain containing 1##BC002773|PEF1|553115|penta-EF-hand domain containing 1##AK301226|PEF1|553115|penta-EF-hand domain containing 1##AB018357|PEF1|553115|penta-EF-hand domain containing 1##AB026628|PEF1|553115|penta-EF-hand domain containing 1##BC012561|PEF1|553115|penta-EF-hand domain containing 1##AY359011|PEF1|553115|penta-EF-hand domain containing 1##AK001420|PEF1|553115|penta-EF-hand domain containing 1##NM_012392|PEF1|553115|penta-EF-hand domain containing 1	1.052129	CTCF.p2:-7:0.999
chr3	55754767	55754882	reg1003528.p1	14.240	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-233206	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-233492	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-239416	-	BC111550 BC112391 AB002376 NM_015576	747553	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	836378	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	836422	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.0	
chr11	12069049	12069187	reg1003978.p1	14.237	+	TSC_hg19_v1_chr11_-_12030884 AB057591 NM_013253	-38216	-	TSC_hg19_v1_chr11_-_12030877 AY358378	-38260	-	AK289897 TSC_hg19_v1_chr11_-_12030788	-38339	-	TSC_hg19_v1_chr11_+_12132122 BC044577 NM_014632 BC015755 AB018293	63012	+	AK123671 NM_032867	239328	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	329991	+	AB057591|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_013253|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AY358378|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK289897|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##BC044577|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_014632|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##BC015755|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB018293|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha	1.006401	CTCF.p2:-19:0.991
chr15	32160188	32160302	reg1003543.p1	14.236	+	AJ430383 NM_130901	-212704	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-540907	+	NM_001243538	-637196	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	2584	-	TSC_hg19_v1_chr15_-_32162898 AK126002	2698	-	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	162498	+	AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A##AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7	0.93854	CTCF.p2:-12:0.939
chr7	105650034	105650177	reg1004025.p1	14.236	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	-46407	+	TSC_hg19_v1_chr7_+_105517250 AK125261	-132841	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	-133120	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	102576	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	102639	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	102910	-	NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3##AK125261|CDHR3|222256|cadherin-related family member 3##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##X61382|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1	0.999079	CTCF.p2:4:0.946
chr3	156227602	156227757	reg1004027.p1	14.234	+	NM_172159 BC043166 AK127240	-218869	+	NM_003471 AK292999 L39833 U16953 U17968	-366817	+	NM_172160 L47665 AK292693 AK303287	-389328	+	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	45202	-	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	45264	-	NM_015508	164525	+	NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_003471|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292999|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L39833|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U16953|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U17968|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_172160|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L47665|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292693|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK303287|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	0.986176	CTCF.p2:9:0.986
chr5	122946922	122947040	reg1003704.p1	14.233	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-99099	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-187837	-	NM_001136239 AK297992 AF272898 AF272899	-522137	+	BC131507 AB033107 BC151226 NM_020747	1133807	-	NM_001146319 AK316288 AK300154	2748833	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	2811862	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.926024	CTCF.p2:11:0.926
chr5	87986874	87987026	reg1004540.p1	14.233	+	TSC_hg19_v1_chr5_-_87980643 AK125167	-6243	-	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	-17805	-	BC047059 TSC_hg19_v1_chr5_+_87564842	-422101	+	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	132723	-	TSC_hg19_v1_chr5_-_88179002 AK312472 L08895 AK307883 BC026341	192056	-	TSC_hg19_v1_chr5_-_88179279 NM_001193350 NM_002397	192335	-	AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##BC047059|LOC100505894|100505894|uncharacterized LOC100505894##EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C##AK312472|MEF2C|4208|myocyte enhancer factor 2C##L08895|MEF2C|4208|myocyte enhancer factor 2C##AK307883|MEF2C|4208|myocyte enhancer factor 2C##BC026341|MEF2C|4208|myocyte enhancer factor 2C##NM_001193350|MEF2C|4208|myocyte enhancer factor 2C##NM_002397|MEF2C|4208|myocyte enhancer factor 2C	0.982569	CTCF.p2:7:0.983
chr1	206982085	206982212	reg1003911.p1	14.232	+	AY040367 NM_153758 AB463800	-9922	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-36269	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-123677	+	AF453946 NM_013371	20073	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	57027	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	88652	+	AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24	0.0	
chr19	33726291	33726427	reg1002488.p1	14.232	+	CU690138 AK316594 TSC_hg19_v1_chr19_-_33716685 BC035627 AK307527 AB037670 AJ277731 BC022457 NM_019849	-9677	-	TSC_hg19_v1_chr19_+_33697959 AF085860	-28363	+	AB009462 NM_002333 BC007408 TSC_hg19_v1_chr19_+_33685676 EU176387 AK296536	-40756	+	AB590467 TSC_hg19_v1_chr19_-_33793398	67004	-	BC027902 BC063874 NM_004364 TSC_hg19_v1_chr19_-_33793437	67074	-	TSC_hg19_v1_chr19_-_33793441 Y11525	67096	-	AK316594|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##BC035627|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##AK307527|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##AB037670|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##AJ277731|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##BC022457|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##NM_019849|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##AF085860|LRP3|4037|low density lipoprotein receptor-related protein 3##AB009462|LRP3|4037|low density lipoprotein receptor-related protein 3##NM_002333|LRP3|4037|low density lipoprotein receptor-related protein 3##BC007408|LRP3|4037|low density lipoprotein receptor-related protein 3##EU176387|LRP3|4037|low density lipoprotein receptor-related protein 3##AK296536|LRP3|4037|low density lipoprotein receptor-related protein 3##BC027902|CEBPA|1050|CCAAT/enhancer binding protein (C/EBP), alpha##BC063874|CEBPA|1050|CCAAT/enhancer binding protein (C/EBP), alpha##NM_004364|CEBPA|1050|CCAAT/enhancer binding protein (C/EBP), alpha##Y11525|CEBPA|1050|CCAAT/enhancer binding protein (C/EBP), alpha	0.999231	CTCF.p2:-21:0.999
chr6	155249605	155249752	reg1004005.p1	14.232	+	TSC_hg19_v1_chr6_+_155054812 AB029039	-194853	+	AK295651 AK303001 AK307815 TSC_hg19_v1_chr6_+_155054549 BC032728	-195124	+	BC070071 NM_014892 TSC_hg19_v1_chr6_+_155054540 AK302969	-195153	+	NM_012454	161744	+	NM_001010927 AK299723 BC066979 AF120324 BC022469	288450	+	BC020838 NM_001001346	335468	+	AB029039|SCAF8|22828|SR-related CTD-associated factor 8##AK295651|SCAF8|22828|SR-related CTD-associated factor 8##AK303001|SCAF8|22828|SR-related CTD-associated factor 8##AK307815|SCAF8|22828|SR-related CTD-associated factor 8##BC032728|SCAF8|22828|SR-related CTD-associated factor 8##BC070071|SCAF8|22828|SR-related CTD-associated factor 8##NM_014892|SCAF8|22828|SR-related CTD-associated factor 8##AK302969|SCAF8|22828|SR-related CTD-associated factor 8##NM_012454|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC020838|CLDN20|49861|claudin 20##NM_001001346|CLDN20|49861|claudin 20	0.977885	CTCF.p2:-17:0.978
chrX	84366490	84366624	reg1005248.p1	14.232	+	NM_001012980	-2584	-	AK130506 NM_198450 AY358193 BC107095 BC107096 CR749250	-107690	+	BC101720 BC101722 BC143522 BX538112 AK055240 AK290050 BX649166 NM_001177478 NM_001177479 NM_144657	-609115	-	TSC_hg19_v1_chrX_+_84498996 NM_021998	132440	+	BC006349 TSC_hg19_v1_chrX_+_84499121 AK308097	132529	+	TSC_hg19_v1_chrX_-_84634396 DQ892227	267870	-	NM_001012980|SATL1|340562|spermidine/spermine N1-acetyl transferase-like 1##AK130506|APOOL|139322|apolipoprotein O-like##NM_198450|APOOL|139322|apolipoprotein O-like##AY358193|APOOL|139322|apolipoprotein O-like##BC107095|APOOL|139322|apolipoprotein O-like##BC107096|APOOL|139322|apolipoprotein O-like##CR749250|APOOL|139322|apolipoprotein O-like##BC101720|HDX|139324|highly divergent homeobox##BC101722|HDX|139324|highly divergent homeobox##BC143522|HDX|139324|highly divergent homeobox##BX538112|HDX|139324|highly divergent homeobox##AK055240|HDX|139324|highly divergent homeobox##AK290050|HDX|139324|highly divergent homeobox##BX649166|HDX|139324|highly divergent homeobox##NM_001177478|HDX|139324|highly divergent homeobox##NM_001177479|HDX|139324|highly divergent homeobox##NM_144657|HDX|139324|highly divergent homeobox##NM_021998|ZNF711|7552|zinc finger protein 711##BC006349|ZNF711|7552|zinc finger protein 711##AK308097|ZNF711|7552|zinc finger protein 711##DQ892227|POF1B|79983|premature ovarian failure, 1B	0.917189	CTCF.p2:-6:0.917
chr16	24021914	24022041	reg1003411.p1	14.231	+	AB587511 EU832791 GQ129253 TSC_hg19_v1_chr16_+_23847512	-174471	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	-174582	+	TSC_hg19_v1_chr16_+_23847321 BC036472	-174645	+	BC037899 NM_006539 AK095553	244897	+	AK055453 TSC_hg19_v1_chr16_+_24267474	245497	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	245721	+	EU832791|PRKCB|5579|protein kinase C, beta##GQ129253|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	0.99431	CTCF.p2:1:0.994
chr17	4812505	4812634	reg1004014.p1	14.229	+	NM_000080 X66403	-6201	-	AK309386 AK128415 NM_001145536	-9663	+	TSC_hg19_v1_chr17_+_4736660 NM_001024937 NM_015716 NM_153827 NM_170663 BC034673 AB209450 AB041926 BC094686 DQ891158 DQ894339 AB035698 AY775058	-75824	+	BC027955 NM_000173 J02940	23038	+	CR456834 CU677597 DQ891152 DQ894331 AK290376 TSC_hg19_v1_chr17_-_4843342 BC016294 AF070548 AK313010 BC006508 BC006519 BC017170 BC016473 NM_001165417 NM_001165418 NM_003562	30763	-	TSC_hg19_v1_chr17_+_4843617 AK025329 NM_015528	31043	+	NM_000080|CHRNE|1145|cholinergic receptor, nicotinic, epsilon##X66403|CHRNE|1145|cholinergic receptor, nicotinic, epsilon##AK309386|C17orf107|100130311|chromosome 17 open reading frame 107##AK128415|C17orf107|100130311|chromosome 17 open reading frame 107##NM_001145536|C17orf107|100130311|chromosome 17 open reading frame 107##NM_001024937|MINK1|50488|misshapen-like kinase 1##NM_015716|MINK1|50488|misshapen-like kinase 1##NM_153827|MINK1|50488|misshapen-like kinase 1##NM_170663|MINK1|50488|misshapen-like kinase 1##BC034673|MINK1|50488|misshapen-like kinase 1##AB209450|MINK1|50488|misshapen-like kinase 1##AB041926|MINK1|50488|misshapen-like kinase 1##BC094686|MINK1|50488|misshapen-like kinase 1##DQ891158|MINK1|50488|misshapen-like kinase 1##DQ894339|MINK1|50488|misshapen-like kinase 1##AB035698|MINK1|50488|misshapen-like kinase 1##AY775058|MINK1|50488|misshapen-like kinase 1##BC027955|GP1BA|2811|glycoprotein Ib (platelet), alpha polypeptide##NM_000173|GP1BA|2811|glycoprotein Ib (platelet), alpha polypeptide##J02940|GP1BA|2811|glycoprotein Ib (platelet), alpha polypeptide##CR456834|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##DQ891152|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##DQ894331|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##AK290376|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##BC016294|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##AF070548|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##AK313010|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##BC006508|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##BC006519|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##BC017170|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##BC016473|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##NM_001165417|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##NM_001165418|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##NM_003562|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##AK025329|RNF167|26001|ring finger protein 167##NM_015528|RNF167|26001|ring finger protein 167	0.127183	
chr8	82147591	82147719	reg1003599.p1	14.229	+	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	-123341	-	AK131274 NM_001033723	-360640	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-749171	+	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	45118	+	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	212014	-	AB528797 NM_001080526	226102	-	AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2##NM_001080526|FABP9|646480|fatty acid binding protein 9, testis	0.330377	CTCF.p2:24:0.330
chr1	41418260	41418402	reg1004321.p1	14.227	+	BC035496 TSC_hg19_v1_chr1_-_41328020	-90311	-	TSC_hg19_v1_chr1_-_41328006 BC052559 NM_133467	-90322	-	TSC_hg19_v1_chr1_+_41284599 AK074957	-133714	+	TSC_hg19_v1_chr1_+_41444968 NM_001905	26656	+	TSC_hg19_v1_chr1_+_41445365 BC009408	27031	+	AK297386 TSC_hg19_v1_chr1_+_41445376	27049	+	BC035496|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##BC052559|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##NM_133467|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##AK074957|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_001905|CTPS|1503|CTP synthase##BC009408|CTPS|1503|CTP synthase##AK297386|CTPS|1503|CTP synthase	0.965227	CTCF.p2:12:0.965
chr4	89945346	89945461	reg1002767.p1	14.227	+	AB385402 AB020721 TSC_hg19_v1_chr4_-_89744384 AK027138 BC033006 BC086875 BC058029 AK296932 NM_001015045 AK091787 AX747185	-201122	-	BC104883 TSC_hg19_v1_chr4_-_89618996 AL834329 AK054689 BC022544 NM_153757	-326428	-	AK296379 TSC_hg19_v1_chr4_+_89513611 AK289990 BC038960 D25215 NM_014606	-431782	+	CU687656 BC063126 BC041029 BC053569 BX647410 NM_014883	32816	-	AK091881 AX747234 TSC_hg19_v1_chr4_-_90032571	87156	-	AK027653 NM_145715	88564	+	AB020721|FAM13A|10144|family with sequence similarity 13, member A##AK027138|FAM13A|10144|family with sequence similarity 13, member A##BC033006|FAM13A|10144|family with sequence similarity 13, member A##BC086875|FAM13A|10144|family with sequence similarity 13, member A##BC058029|FAM13A|10144|family with sequence similarity 13, member A##AK296932|FAM13A|10144|family with sequence similarity 13, member A##NM_001015045|FAM13A|10144|family with sequence similarity 13, member A##AK091787|FAM13A|10144|family with sequence similarity 13, member A##BC104883|NAP1L5|266812|nucleosome assembly protein 1-like 5##AL834329|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK054689|NAP1L5|266812|nucleosome assembly protein 1-like 5##BC022544|NAP1L5|266812|nucleosome assembly protein 1-like 5##NM_153757|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK296379|HERC3|8916|hect domain and RLD 3##AK289990|HERC3|8916|hect domain and RLD 3##BC038960|HERC3|8916|hect domain and RLD 3##D25215|HERC3|8916|hect domain and RLD 3##NM_014606|HERC3|8916|hect domain and RLD 3##BC063126|FAM13A|10144|family with sequence similarity 13, member A##BC041029|FAM13A|10144|family with sequence similarity 13, member A##BC053569|FAM13A|10144|family with sequence similarity 13, member A##BX647410|FAM13A|10144|family with sequence similarity 13, member A##NM_014883|FAM13A|10144|family with sequence similarity 13, member A##AK091881|FAM13A|10144|family with sequence similarity 13, member A##AK027653|TIGD2|166815|tigger transposable element derived 2##NM_145715|TIGD2|166815|tigger transposable element derived 2	0.968608	CTCF.p2:7:0.969
chr1	3537836	3537961	reg1003107.p1	14.226	+	AB231860 NM_001409	-9840	-	TSC_hg19_v1_chr1_-_3447976 AB011539	-89906	-	AK310408 TSC_hg19_v1_chr1_+_3388187 AK296150	-149714	+	TSC_hg19_v1_chr1_+_3541565 NM_182752 AK096427	3666	+	AK298343 TSC_hg19_v1_chr1_+_3541608 AK289919 BC019034	3711	+	CU678066 AB034912 AK000437 AK225525 BC002611 BC086311 TSC_hg19_v1_chr1_-_3566668 AK302397 NM_017818	28718	-	AB231860|MEGF6|1953|multiple EGF-like-domains 6##NM_001409|MEGF6|1953|multiple EGF-like-domains 6##AB011539|MEGF6|1953|multiple EGF-like-domains 6##AK310408|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK296150|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##NM_182752|TPRG1L|127262|tumor protein p63 regulated 1-like##AK096427|TPRG1L|127262|tumor protein p63 regulated 1-like##AK298343|TPRG1L|127262|tumor protein p63 regulated 1-like##AK289919|TPRG1L|127262|tumor protein p63 regulated 1-like##BC019034|TPRG1L|127262|tumor protein p63 regulated 1-like##AB034912|WRAP73|49856|WD repeat containing, antisense to TP73##AK000437|WRAP73|49856|WD repeat containing, antisense to TP73##AK225525|WRAP73|49856|WD repeat containing, antisense to TP73##BC002611|WRAP73|49856|WD repeat containing, antisense to TP73##BC086311|WRAP73|49856|WD repeat containing, antisense to TP73##AK302397|WRAP73|49856|WD repeat containing, antisense to TP73##NM_017818|WRAP73|49856|WD repeat containing, antisense to TP73	0.830069	CTCF.p2:6:0.830
chr16	68273966	68274106	reg1003264.p2	14.225	+	CU688826 BC030146 BC052309 TSC_hg19_v1_chr16_-_68270026 AK025571 NM_024939	-3995	-	TSC_hg19_v1_chr16_+_68119350 L41067	-154667	+	TSC_hg19_v1_chr16_+_68119335 AB209824	-154698	+	AK300596 AK074828 NM_012320 TSC_hg19_v1_chr16_+_68279275 AK296263 AK298494 AL110209 BC062605 AK001705 AK222790	5214	+	AB017494 TSC_hg19_v1_chr16_+_68279299 AY358425 EU832326	5275	+	TSC_hg19_v1_chr16_+_68298430 NM_001076785 NM_003983 CR749291 CR749475 AK310866 BC028216	24414	+	BC030146|ESRP2|80004|epithelial splicing regulatory protein 2##BC052309|ESRP2|80004|epithelial splicing regulatory protein 2##AK025571|ESRP2|80004|epithelial splicing regulatory protein 2##NM_024939|ESRP2|80004|epithelial splicing regulatory protein 2##L41067|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##AB209824|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##AK300596|PLA2G15|23659|phospholipase A2, group XV##AK074828|PLA2G15|23659|phospholipase A2, group XV##NM_012320|PLA2G15|23659|phospholipase A2, group XV##AK296263|PLA2G15|23659|phospholipase A2, group XV##AK298494|PLA2G15|23659|phospholipase A2, group XV##AL110209|PLA2G15|23659|phospholipase A2, group XV##BC062605|PLA2G15|23659|phospholipase A2, group XV##AK001705|PLA2G15|23659|phospholipase A2, group XV##AK222790|PLA2G15|23659|phospholipase A2, group XV##AB017494|PLA2G15|23659|phospholipase A2, group XV##AY358425|PLA2G15|23659|phospholipase A2, group XV##EU832326|PLA2G15|23659|phospholipase A2, group XV##NM_001076785|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##NM_003983|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749291|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749475|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK310866|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC028216|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6	0.829195	CTCF.p2:-8:0.809
chr10	80955321	80955418	reg1001980.p1	14.224	+	TSC_hg19_v1_chr10_+_80899458 AK025812	-55885	+	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	-126581	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-1161738	+	TSC_hg19_v1_chr10_+_81003207 AB033050	47761	+	AK299728 TSC_hg19_v1_chr10_+_81065901	110519	+	TSC_hg19_v1_chr10_+_81070578 BC025342 BC068072	115275	+	AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK299728|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC025342|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC068072|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.992947	CTCF.p2:9:0.993
chr17	74001771	74001914	reg1004120.p1	14.224	+	NM_001258 TSC_hg19_v1_chr17_+_73997033	-4833	+	TSC_hg19_v1_chr17_-_73975509 NM_001185039 NM_004035 NM_007292	-26315	-	BC008767 TSC_hg19_v1_chr17_-_73975478	-26376	-	BC126103 BC126105 BC143813 BC143814 U53786 TSC_hg19_v1_chr17_-_74023388	21508	-	TSC_hg19_v1_chr17_-_74023511 NM_001988 AK290333	21672	-	AL512708 TSC_hg19_v1_chr17_-_74068571 AF195951	66706	-	NM_001258|CDK3|1018|cyclin-dependent kinase 3##NM_001185039|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##NM_004035|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##NM_007292|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##BC008767|ACOX1|51|acyl-CoA oxidase 1, palmitoyl##BC126103|EVPL|2125|envoplakin##BC126105|EVPL|2125|envoplakin##BC143813|EVPL|2125|envoplakin##BC143814|EVPL|2125|envoplakin##U53786|EVPL|2125|envoplakin##NM_001988|EVPL|2125|envoplakin##AK290333|EVPL|2125|envoplakin##AL512708|SRP68|6730|signal recognition particle 68kDa##AF195951|SRP68|6730|signal recognition particle 68kDa	0.998695	CTCF.p2:18:0.999
chr1	8909072	8909186	reg1003341.p1	14.224	+	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	-31537	-	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	-425112	-	NM_001080397	-524740	+	GU170215 NM_001201483	22505	-	BC001810 TSC_hg19_v1_chr1_-_8938710 AK098420 M14328 BC011130	29578	-	BC015641 BC027725 TSC_hg19_v1_chr1_-_8938743 BC004458 BC009912 AK222517 BC022545 D28437	29606	-	BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##GU170215|ENO1|2023|enolase 1, (alpha)##NM_001201483|ENO1|2023|enolase 1, (alpha)##BC001810|ENO1|2023|enolase 1, (alpha)##AK098420|ENO1|2023|enolase 1, (alpha)##M14328|ENO1|2023|enolase 1, (alpha)##BC011130|ENO1|2023|enolase 1, (alpha)##BC015641|ENO1|2023|enolase 1, (alpha)##BC027725|ENO1|2023|enolase 1, (alpha)##BC004458|ENO1|2023|enolase 1, (alpha)##BC009912|ENO1|2023|enolase 1, (alpha)##AK222517|ENO1|2023|enolase 1, (alpha)##BC022545|ENO1|2023|enolase 1, (alpha)##D28437|ENO1|2023|enolase 1, (alpha)	0.985674	CTCF.p2:15:0.986
chr1	55410886	55411021	reg1004174.p1	14.223	+	NM_014762 TSC_hg19_v1_chr1_-_55352925	-58021	-	TSC_hg19_v1_chr1_-_55352904 D13643	-58055	-	TSC_hg19_v1_chr1_-_55352884 AF261758	-58068	-	BC029775 NM_182532	35511	+	AK129999 AY034632 NM_057176 BC103898 BC103899 BC103900	53668	+	NM_174936 TSC_hg19_v1_chr1_+_55505192	94217	+	NM_014762|DHCR24|1718|24-dehydrocholesterol reductase##D13643|DHCR24|1718|24-dehydrocholesterol reductase##AF261758|DHCR24|1718|24-dehydrocholesterol reductase##BC029775|TMEM61|199964|transmembrane protein 61##NM_182532|TMEM61|199964|transmembrane protein 61##AK129999|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##AY034632|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_057176|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103898|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103899|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103900|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_174936|PCSK9|255738|proprotein convertase subtilisin/kexin type 9	0.998995	CTCF.p2:-1:0.999
chr2	27165591	27165708	reg1003849.p1	14.221	+	AF264015 NM_020134 TSC_hg19_v1_chr2_+_27070999 BC002874 NM_001253723 NM_001253724	-94523	+	TSC_hg19_v1_chr2_+_27008924 U14518 BC000881 BC002703 CU674442 BT007246	-156661	+	NM_001809 NM_001042426 TSC_hg19_v1_chr2_+_27008894	-156757	+	TSC_hg19_v1_chr2_+_27193529 AK312342 AB025186 NM_012326 BC011557 Y11174	27901	+	TSC_hg19_v1_chr2_+_27255814 NM_001083590 NM_017727 BC068479	90134	+	TSC_hg19_v1_chr2_+_27255832 AK297150	90180	+	AF264015|DPYSL5|56896|dihydropyrimidinase-like 5##NM_020134|DPYSL5|56896|dihydropyrimidinase-like 5##BC002874|DPYSL5|56896|dihydropyrimidinase-like 5##NM_001253723|DPYSL5|56896|dihydropyrimidinase-like 5##NM_001253724|DPYSL5|56896|dihydropyrimidinase-like 5##U14518|CENPA|1058|centromere protein A##BC000881|CENPA|1058|centromere protein A##BC002703|CENPA|1058|centromere protein A##BT007246|CENPA|1058|centromere protein A##NM_001809|CENPA|1058|centromere protein A##NM_001042426|CENPA|1058|centromere protein A##AK312342|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##AB025186|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##NM_012326|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##BC011557|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##Y11174|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##NM_001083590|TMEM214|54867|transmembrane protein 214##NM_017727|TMEM214|54867|transmembrane protein 214##BC068479|TMEM214|54867|transmembrane protein 214##AK297150|TMEM214|54867|transmembrane protein 214	0.988606	CTCF.p2:10:0.989
chr9	70487304	70487431	reg1004497.p1	14.220	+	NM_001099279 NM_199244	-57637	-	NM_001126334	-308553	-	AL136793 NM_001098805	-1105387	+	CU688346 TSC_hg19_v1_chr9_-_70490092	2714	-	AF265442 TSC_hg19_v1_chr9_-_70490099	2731	-	BC082271 BC069006 AK297912 TSC_hg19_v1_chr9_-_70490116	2745	-	NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC082271|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK297912|CBWD3|445571|COBW domain containing 3	0.584332	CTCF.p2:-17:0.584
chr19	9316316	9316429	reg1003805.p1	14.218	+	AK095468 NM_175883	-20103	+	BC001685 TSC_hg19_v1_chr19_+_9271396	-44991	+	TSC_hg19_v1_chr19_+_9251103 NM_001190791 NM_020933 AF148135 AF275255 AK056570 AK314560 BC078154 BC009367 AL834126 AK304871 AK304151	-65279	+	BC137147 BC137162 NM_001005191	9174	-	BC146920 NM_001079935	45290	+	BC109267 BC109268 NM_198535 EU446770	99422	-	AK095468|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2##NM_175883|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2##NM_001190791|ZNF317|57693|zinc finger protein 317##NM_020933|ZNF317|57693|zinc finger protein 317##AF148135|ZNF317|57693|zinc finger protein 317##AF275255|ZNF317|57693|zinc finger protein 317##AK056570|ZNF317|57693|zinc finger protein 317##AK314560|ZNF317|57693|zinc finger protein 317##BC078154|ZNF317|57693|zinc finger protein 317##BC009367|ZNF317|57693|zinc finger protein 317##AL834126|ZNF317|57693|zinc finger protein 317##AK304871|ZNF317|57693|zinc finger protein 317##AK304151|ZNF317|57693|zinc finger protein 317##BC137147|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4##BC137162|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4##NM_001005191|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4##BC146920|OR7E24|26648|olfactory receptor, family 7, subfamily E, member 24##NM_001079935|OR7E24|26648|olfactory receptor, family 7, subfamily E, member 24##BC109267|ZNF699|374879|zinc finger protein 699##BC109268|ZNF699|374879|zinc finger protein 699##NM_198535|ZNF699|374879|zinc finger protein 699##EU446770|ZNF266|10781|zinc finger protein 266	0.980626	CTCF.p2:-10:0.981
chr17	77038569	77038689	reg1004162.p1	14.217	+	AF329840 NM_198593 BC021553	-8107	+	TSC_hg19_v1_chr17_+_77020308 AK055541	-18319	+	TSC_hg19_v1_chr17_+_77020250 NM_030968 NM_198594	-18387	+	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	32401	+	NM_001082575	439933	-	AY230663 BC041453 NM_178543 AY358622	666260	+	AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_030968|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198594|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7	0.516748	CTCF.p2:0:0.517
chr6	110712146	110712273	reg1003087.p1	14.217	+	NM_001123364	-32735	-	TSC_hg19_v1_chr6_+_110501629 AF038392 NM_015891 BC117145 BC126114 AK314601 AK222721 BC018059 AK295055 AB528038 HQ258473 AB208903 AF061241 AF015044	-210586	+	TSC_hg19_v1_chr6_-_110501166 NM_001024934 NM_001024935 NM_001024936 NM_003931	-211024	-	TSC_hg19_v1_chr6_-_110736760 BC032786 NM_003649 NM_004032 AK293029	24555	-	BC012014 AF268892 AY145502 BC037247 TSC_hg19_v1_chr6_-_110797794	85579	-	TSC_hg19_v1_chr6_-_110797817 AK304546	85609	-	NM_001123364|C6orf186|728464|chromosome 6 open reading frame 186##AF038392|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##NM_015891|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC117145|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC126114|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK314601|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK222721|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK295055|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##HQ258473|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AB208903|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AF061241|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AF015044|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##NM_001024934|WASF1|8936|WAS protein family, member 1##NM_001024935|WASF1|8936|WAS protein family, member 1##NM_001024936|WASF1|8936|WAS protein family, member 1##NM_003931|WASF1|8936|WAS protein family, member 1##BC032786|DDO|8528|D-aspartate oxidase##NM_003649|DDO|8528|D-aspartate oxidase##NM_004032|DDO|8528|D-aspartate oxidase##AK293029|DDO|8528|D-aspartate oxidase##BC012014|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AF268892|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AY145502|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC037247|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304546|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16	0.995253	CTCF.p2:25:0.995
chrX	73770267	73770409	reg1004093.p1	14.217	+	NM_006517 TSC_hg19_v1_chrX_+_73641331 U05315 AB085789	-129092	+	BC021176 NM_203303 TSC_hg19_v1_chrX_+_73524041 EU446947 EU831786 EU831864 CU676854	-246276	+	TSC_hg19_v1_chrX_-_73513379 AK311345	-256964	-	AF155109 TSC_hg19_v1_chrX_-_73834424 BC013357	64079	-	BC002451 TSC_hg19_v1_chrX_-_73834428	64090	-	TSC_hg19_v1_chrX_-_73834444 AK001334	64101	-	NM_006517|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##U05315|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##AB085789|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##BC021176|ZCCHC13|389874|zinc finger, CCHC domain containing 13##NM_203303|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU446947|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831786|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831864|ZCCHC13|389874|zinc finger, CCHC domain containing 13##AK311345|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##AF155109|RLIM|51132|ring finger protein, LIM domain interacting##BC013357|RLIM|51132|ring finger protein, LIM domain interacting##AK001334|RLIM|51132|ring finger protein, LIM domain interacting	1.944463	CTCF.p2:-28:0.999	CTCF.p2:36:0.945
chr11	3602485	3602604	reg1004200.p1	14.215	+	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	-202165	-	AK293940 NM_001039165	-348929	-	AB529240 AY255583 NM_001164377	-362502	-	NM_053017 NM_001079536 Y16835	60970	-	BC017828 BC069102 NM_004314 S74683 BC111729	63826	+	AB528800 AJ278118 AJ295237 BC136250 BC143303 AF199235 NM_020402	90034	-	BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195##AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##NM_053017|ART5|116969|ADP-ribosyltransferase 5##NM_001079536|ART5|116969|ADP-ribosyltransferase 5##Y16835|ART5|116969|ADP-ribosyltransferase 5##BC017828|ART1|417|ADP-ribosyltransferase 1##BC069102|ART1|417|ADP-ribosyltransferase 1##NM_004314|ART1|417|ADP-ribosyltransferase 1##S74683|ART1|417|ADP-ribosyltransferase 1##BC111729|ART1|417|ADP-ribosyltransferase 1##AJ278118|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AJ295237|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC136250|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC143303|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AF199235|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##NM_020402|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10	0.999894	CTCF.p2:-5:1.000
chr18	55803147	55803266	reg1003801.p1	14.215	+	AF385931 NM_001144964	-88749	+	TSC_hg19_v1_chr18_+_55712924 AY243322	-90299	+	DQ890913 DQ893350 AY312514 TSC_hg19_v1_chr18_+_55711911	-91300	+	TSC_hg19_v1_chr18_+_55816551 AY112983 AY112984 DQ181796 NM_001144965 NM_001144968 NM_001144969 NM_001144971 AY112985	13351	+	TSC_hg19_v1_chr18_+_55862636 NM_001144970 AK294963 AY243318 AB007899	59524	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	85556	+	AF385931|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144964|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243322|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112983|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112984|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ181796|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144965|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144968|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144969|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144971|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112985|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.975315	CTCF.p2:0:0.975
chr3	149526118	149526257	reg1004819.p1	14.215	+	BC171805 NM_001144960	-15578	-	TSC_hg19_v1_chr3_-_149470277 AF059618 BC001228 BC022206 AF125096 BC093077 NM_016094	-55917	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	-55948	-	TSC_hg19_v1_chr3_+_149530500 NM_007282 NM_183381 AK090638	4290	+	TSC_hg19_v1_chr3_+_149530987 AK313304	4799	+	BC009781 BC009803 TSC_hg19_v1_chr3_+_149531012 AF037204 AF070558 BC017878	4843	+	BC171805|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1##NM_001144960|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1##AF059618|COMMD2|51122|COMM domain containing 2##BC001228|COMMD2|51122|COMM domain containing 2##BC022206|COMMD2|51122|COMM domain containing 2##AF125096|COMMD2|51122|COMM domain containing 2##BC093077|COMMD2|51122|COMM domain containing 2##NM_016094|COMMD2|51122|COMM domain containing 2##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2##NM_007282|RNF13|11342|ring finger protein 13##NM_183381|RNF13|11342|ring finger protein 13##AK090638|RNF13|11342|ring finger protein 13##AK313304|RNF13|11342|ring finger protein 13##BC009781|RNF13|11342|ring finger protein 13##BC009803|RNF13|11342|ring finger protein 13##AF037204|RNF13|11342|ring finger protein 13##AF070558|RNF13|11342|ring finger protein 13##BC017878|RNF13|11342|ring finger protein 13	0.992086	CTCF.p2:18:0.992
chr7	120446087	120446230	reg1004505.p1	14.214	+	AK307139 AB028967 NM_012281	-532454	+	NM_019644 AK302407	-2581424	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-2621987	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	51862	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	52002	-	AK000096 NM_019071 NM_198267 TSC_hg19_v1_chr7_+_120590832 AF161419 BC009777 BC093091 AY007790 AK291905 AF074968 BC073865 AF180298 BC062634 BC093689 BC101609 BC143316 BC009776 BC010851 BC146417 BC153171 AB463778	144723	+	AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12##AK000096|ING3|54556|inhibitor of growth family, member 3##NM_019071|ING3|54556|inhibitor of growth family, member 3##NM_198267|ING3|54556|inhibitor of growth family, member 3##AF161419|ING3|54556|inhibitor of growth family, member 3##BC009777|ING3|54556|inhibitor of growth family, member 3##BC093091|ING3|54556|inhibitor of growth family, member 3##AY007790|ING3|54556|inhibitor of growth family, member 3##AK291905|ING3|54556|inhibitor of growth family, member 3##AF074968|ING3|54556|inhibitor of growth family, member 3##BC073865|ING3|54556|inhibitor of growth family, member 3##AF180298|ING3|54556|inhibitor of growth family, member 3##BC062634|ING3|54556|inhibitor of growth family, member 3##BC093689|ING3|54556|inhibitor of growth family, member 3##BC101609|ING3|54556|inhibitor of growth family, member 3##BC143316|ING3|54556|inhibitor of growth family, member 3##BC009776|ING3|54556|inhibitor of growth family, member 3##BC010851|ING3|54556|inhibitor of growth family, member 3##BC146417|ING3|54556|inhibitor of growth family, member 3##BC153171|ING3|54556|inhibitor of growth family, member 3	0.996121	CTCF.p2:-15:0.996
chr7	4650612	4650735	reg1004015.p1	14.214	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	-1309674	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	-1567211	-	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-1766865	-	TSC_hg19_v1_chr7_+_4721925 NM_001037165	71165	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	71578	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	164588	+	AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_001037165|FOXK1|221937|forkhead box K1##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415	0.999479	CTCF.p2:-11:0.999
chr10	98590415	98590553	reg1003964.p1	14.213	+	BX648550 TSC_hg19_v1_chr10_-_98480272 AK125635 NM_152309	-110243	-	TSC_hg19_v1_chr10_-_98346798 AF269150 BC136788 BC136789 BC144412 NM_020123	-243661	-	TSC_hg19_v1_chr10_-_98346770 AK314348	-243706	-	TSC_hg19_v1_chr10_+_98592020 NM_001170765 NM_001170766 AL832106 AK308356 BC053359	1569	+	TSC_hg19_v1_chr10_-_98592186 AB593180	1716	-	TSC_hg19_v1_chr10_+_98592758 NM_032440 AL834245 AB058698	2244	+	BX648550|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AK125635|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_152309|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3##BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3##AK314348|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor##AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor##BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor##AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor##AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor	0.145693	
chr16	18980711	18980856	reg1004496.p1	14.213	+	TSC_hg19_v1_chr16_-_18937724 NM_015092 AB061371	-43052	-	AK301636 CU679669 TSC_hg19_v1_chr16_-_18812870 BC010281 D31885 NM_015161 AK291137 AK308092 BX648446 AK300825 AK300869 AK307315	-168001	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	-179128	-	AK094664 NM_024847 TSC_hg19_v1_chr16_+_18995296 AY236498 BC047719 AY263165 BC036205 AK293874 CU690480	14536	+	TSC_hg19_v1_chr16_+_18995511 CR933669 NM_001160364	14775	+	AK315470 NM_016138 TSC_hg19_v1_chr16_+_19078935 BC003185 AK024291	98147	+	NM_015092|SMG1|23049|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)##AB061371|SMG1|23049|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)##AK301636|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BC010281|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##D31885|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##NM_015161|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK291137|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK308092|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BX648446|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK300825|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK300869|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK307315|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a##AK094664|TMC7|79905|transmembrane channel-like 7##NM_024847|TMC7|79905|transmembrane channel-like 7##AY236498|TMC7|79905|transmembrane channel-like 7##BC047719|TMC7|79905|transmembrane channel-like 7##AY263165|TMC7|79905|transmembrane channel-like 7##BC036205|TMC7|79905|transmembrane channel-like 7##AK293874|TMC7|79905|transmembrane channel-like 7##CR933669|TMC7|79905|transmembrane channel-like 7##NM_001160364|TMC7|79905|transmembrane channel-like 7##AK315470|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_016138|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC003185|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK024291|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)	0.999476	CTCF.p2:7:0.999
chr2	9282984	9283129	reg1002842.p2	14.213	+	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	-139235	-	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	-305337	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-460853	+	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	63836	+	TSC_hg19_v1_chr2_+_9346940 BC063308	63903	+	TSC_hg19_v1_chr2_-_9563308 AK093179	280286	-	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##BC063308|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AK093179|ITGB1BP1|9270|integrin beta 1 binding protein 1	0.998249	CTCF.p2:-27:0.998
chr18	72160973	72161106	reg1003495.p1	14.211	+	TSC_hg19_v1_chr18_-_72124545 NM_001044369	-36510	-	CR749350 NM_001174123	-177930	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	-201860	-	TSC_hg19_v1_chr18_+_72163567 NM_018235	2419	+	TSC_hg19_v1_chr18_+_72163611 AK001692 AK300904 AK298309 BC001375	2576	+	TSC_hg19_v1_chr18_+_72166580 AK097155	5556	+	NM_001044369|FAM69C|125704|family with sequence similarity 69, member C##CR749350|C18orf63|644041|chromosome 18 open reading frame 63##NM_001174123|C18orf63|644041|chromosome 18 open reading frame 63##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_018235|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK001692|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK300904|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK298309|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##BC001375|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK097155|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)	0.910452	CTCF.p2:12:0.910
chr19	14590960	14591107	reg1005015.p1	14.211	+	TSC_hg19_v1_chr19_-_14586167 BC051286 NM_000955	-4865	-	BC039034 TSC_hg19_v1_chr19_-_14586139 L22647 BC029768	-4891	-	TSC_hg19_v1_chr19_+_14551088 AK292130 AB527818	-39876	+	TSC_hg19_v1_chr19_-_14606928 AF089816 AK290252 AK290948 BC000410 BC012810 BC016169	15882	-	TSC_hg19_v1_chr19_-_14606940 NM_005716 NM_202467 NM_202468 NM_202469 NM_202470 NM_202494	15910	-	CR536485 CR541677 AB463573 CU676466 BC019827 BC002352 BC013157 D49547 NM_006145 TSC_hg19_v1_chr19_-_14629210 X62421	38160	-	BC051286|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##NM_000955|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##BC039034|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##L22647|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##BC029768|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##AK292130|PKN1|5585|protein kinase N1##AF089816|GIPC1|10755|GIPC PDZ domain containing family, member 1##AK290252|GIPC1|10755|GIPC PDZ domain containing family, member 1##AK290948|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC000410|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC012810|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC016169|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_005716|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202467|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202468|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202469|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202470|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202494|GIPC1|10755|GIPC PDZ domain containing family, member 1##CR536485|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##CR541677|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##BC019827|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##BC002352|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##BC013157|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##D49547|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##NM_006145|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##X62421|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	0.999717	CTCF.p2:6:1.000
chr1	27424014	27424137	reg1002606.p2	14.210	+	TSC_hg19_v1_chr1_-_27339448 AK122816	-84621	-	BC012790 BC014160 NM_052943 TSC_hg19_v1_chr1_-_27339338	-84741	-	TSC_hg19_v1_chr1_+_27320182 NM_001013642 BC069216	-103882	+	M96066 S68616 NM_003047 TSC_hg19_v1_chr1_-_27481521	57386	-	NM_015023 TSC_hg19_v1_chr1_+_27561056	136959	+	TSC_hg19_v1_chr1_+_27561124 AK315564	137052	+	AK122816|FAM46B|115572|family with sequence similarity 46, member B##BC012790|FAM46B|115572|family with sequence similarity 46, member B##BC014160|FAM46B|115572|family with sequence similarity 46, member B##NM_052943|FAM46B|115572|family with sequence similarity 46, member B##NM_001013642|TRNP1|388610|TMF1-regulated nuclear protein 1##BC069216|TRNP1|388610|TMF1-regulated nuclear protein 1##M96066|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##S68616|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_003047|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1	0.99938	CTCF.p2:-4:0.999
chr17	26083883	26084011	reg1004746.p1	14.209	+	TSC_hg19_v1_chr17_+_25958264 AB003517 AB008492	-125675	+	TSC_hg19_v1_chr17_+_25958246 BC105942 BC105944	-125699	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	-125719	+	U31511 TSC_hg19_v1_chr17_-_26127402	43451	-	BC130283 BC144126 U05810 L09210 X73029 AF068236 AK304252 NM_000625 TSC_hg19_v1_chr17_-_26127556	43568	-	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	136444	-	AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC105942|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC105944|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9##U31511|NOS2|4843|nitric oxide synthase 2, inducible##BC130283|NOS2|4843|nitric oxide synthase 2, inducible##BC144126|NOS2|4843|nitric oxide synthase 2, inducible##U05810|NOS2|4843|nitric oxide synthase 2, inducible##L09210|NOS2|4843|nitric oxide synthase 2, inducible##X73029|NOS2|4843|nitric oxide synthase 2, inducible##AF068236|NOS2|4843|nitric oxide synthase 2, inducible##AK304252|NOS2|4843|nitric oxide synthase 2, inducible##NM_000625|NOS2|4843|nitric oxide synthase 2, inducible##AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108	0.939844	CTCF.p2:11:0.940
chr22	43627373	43627495	reg1003346.p1	14.206	+	TSC_hg19_v1_chr22_-_43583141 NM_015140	-44278	-	D63487 AL590888 CT841516 TSC_hg19_v1_chr22_-_43583100 BC001070	-44340	-	TSC_hg19_v1_chr22_+_43547578 BC001110 M36035	-79858	+	AB528481 AF525689 BC127263 BC047916 TSC_hg19_v1_chr22_-_43739356 AK127719 NM_173050	111904	-	TSC_hg19_v1_chr22_+_43808019 AK290541 AK297276 AK299516 AK299531 NM_001044370	180583	+	TSC_hg19_v1_chr22_+_43808109 AK289774	180683	+	NM_015140|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##D63487|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##AL590888|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##CT841516|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##BC001070|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##BC001110|TSPO|706|translocator protein (18kDa)##M36035|TSPO|706|translocator protein (18kDa)##AF525689|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC127263|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC047916|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##AK127719|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##NM_173050|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##AK290541|MPPED1|758|metallophosphoesterase domain containing 1##AK297276|MPPED1|758|metallophosphoesterase domain containing 1##AK299516|MPPED1|758|metallophosphoesterase domain containing 1##AK299531|MPPED1|758|metallophosphoesterase domain containing 1##NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1##AK289774|MPPED1|758|metallophosphoesterase domain containing 1	0.977453	CTCF.p2:-9:0.977
chr8	22530623	22530746	reg1002681.p1	14.206	+	TSC_hg19_v1_chr8_-_22526609 BC009824 AK023980 AF271732 AK001289 AK222470 NM_018688	-4064	-	TSC_hg19_v1_chr8_+_22462537 NM_021174 AL834162 AL834351 AL834352	-68143	+	BC065495 TSC_hg19_v1_chr8_+_22462287 AK095712	-68374	+	AK295134 NM_001199880	19217	-	AK294968 AK295834 NM_001199881	19390	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	19821	-	BC009824|BIN3|55909|bridging integrator 3##AK023980|BIN3|55909|bridging integrator 3##AF271732|BIN3|55909|bridging integrator 3##AK001289|BIN3|55909|bridging integrator 3##AK222470|BIN3|55909|bridging integrator 3##NM_018688|BIN3|55909|bridging integrator 3##NM_021174|KIAA1967|57805|KIAA1967##AL834162|KIAA1967|57805|KIAA1967##AL834351|KIAA1967|57805|KIAA1967##AL834352|KIAA1967|57805|KIAA1967##BC065495|KIAA1967|57805|KIAA1967##AK095712|KIAA1967|57805|KIAA1967##AK295134|EGR3|1960|early growth response 3##NM_001199880|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3	0.999559	CTCF.p2:-10:1.000
chr19	47032968	47033084	reg1002501.p1	14.205	+	TSC_hg19_v1_chr19_-_46999149 AK124720 NM_020709	-33865	-	TSC_hg19_v1_chr19_-_46974789 BC032508 NM_001103149 NM_018215	-58221	-	AL834344 TSC_hg19_v1_chr19_-_46974751 AK290218 BC051688	-58304	-	TSC_hg19_v1_chr19_+_47104390 BC006182	71371	+	AK094504 NM_001205281	71430	-	TSC_hg19_v1_chr19_+_47104543 NM_005184	71494	+	AK124720|PNMAL2|57469|PNMA-like 2##NM_020709|PNMAL2|57469|PNMA-like 2##BC032508|PNMAL1|55228|PNMA-like 1##NM_001103149|PNMAL1|55228|PNMA-like 1##NM_018215|PNMAL1|55228|PNMA-like 1##AL834344|PNMAL1|55228|PNMA-like 1##AK290218|PNMAL1|55228|PNMA-like 1##BC051688|PNMAL1|55228|PNMA-like 1##BC006182|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##AK094504|LOC100506012|100506012|serine/threonine-protein phosphatase 5-like##NM_001205281|LOC100506012|100506012|serine/threonine-protein phosphatase 5-like##NM_005184|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)	0.999059	CTCF.p2:-32:0.999
chr4	8919825	8919965	reg1003853.p1	14.205	+	AB593128 M99587 NM_018942	-46398	-	U83411 TSC_hg19_v1_chr4_+_8594521	-325372	+	AK056317 NM_001014447 NM_001014448 NM_003652 BC080539 BC006393 BC018913 TSC_hg19_v1_chr4_+_8594489	-325456	+	NM_001040071	31581	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	297234	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	325708	+	M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##AK056317|CPZ|8532|carboxypeptidase Z##NM_001014447|CPZ|8532|carboxypeptidase Z##NM_001014448|CPZ|8532|carboxypeptidase Z##NM_003652|CPZ|8532|carboxypeptidase Z##BC080539|CPZ|8532|carboxypeptidase Z##BC006393|CPZ|8532|carboxypeptidase Z##BC018913|CPZ|8532|carboxypeptidase Z##NM_001040071|LOC650293|650293|seven transmembrane helix receptor##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.996397	CTCF.p2:3:0.996
chr6	86064899	86065031	reg1002513.p1	14.204	+	HQ258462 NM_001080508 BC157841 BC132715	-591040	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	-591795	-	TSC_hg19_v1_chr6_-_85472330 AJ010278	-592640	-	NM_001204813 NM_002526 TSC_hg19_v1_chr6_+_86159433	94407	+	TSC_hg19_v1_chr6_+_86159827 AK314661 AX772810 X55740 BC015940 AK075008 BC065937 DQ186653	94850	+	BC046520 AY044865 CU686683 TSC_hg19_v1_chr6_-_86303440 BC095419	238428	-	HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18##AJ010278|TBX18|9096|T-box 18##NM_001204813|NT5E|4907|5'-nucleotidase, ecto (CD73)##NM_002526|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK314661|NT5E|4907|5'-nucleotidase, ecto (CD73)##X55740|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC015940|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK075008|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC065937|NT5E|4907|5'-nucleotidase, ecto (CD73)##DQ186653|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC046520|SNX14|57231|sorting nexin 14##AY044865|SNX14|57231|sorting nexin 14##BC095419|SNX14|57231|sorting nexin 14	0.998735	CTCF.p2:-25:0.999
chr8	57006345	57006476	reg1004798.p1	14.204	+	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	-19324	-	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-213890	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	-214015	+	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	20130	-	TSC_hg19_v1_chr8_-_57123833 U65002	117425	-	AK296933 AK313663 NM_001114634 NM_001114635 NM_002655 TSC_hg19_v1_chr8_-_57123860	117451	-	BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1##AK296933|PLAG1|5324|pleiomorphic adenoma gene 1##AK313663|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001114634|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001114635|PLAG1|5324|pleiomorphic adenoma gene 1##NM_002655|PLAG1|5324|pleiomorphic adenoma gene 1	0.227609	CTCF.p2:6:0.228
chr12	55466979	55467091	reg1002846.p4	14.203	+	NM_021191 AK314136	-53265	+	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	-88533	-	BC132732 BC132734 NM_001098815	-91414	-	BC136988 NM_001005243	56473	+	AB529271 NM_001005280	147773	+	BC140754 NM_001005490	173991	+	NM_021191|NEUROD4|58158|neurogenic differentiation 4##AK314136|NEUROD4|58158|neurogenic differentiation 4##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7##BC140754|OR6C74|254783|olfactory receptor, family 6, subfamily C, member 74##NM_001005490|OR6C74|254783|olfactory receptor, family 6, subfamily C, member 74	0.986874	CTCF.p2:0:0.987
chr1	66708475	66708609	reg1003839.p1	14.202	+	AB209081 NM_001037340 AK290006	-250139	+	AK289969 NM_002600 L20966	-449683	+	NM_001037341 CR749667 BC071607 BC036108	-450347	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	89311	+	TSC_hg19_v1_chr1_+_66798096 AK294441	89553	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	291342	+	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK289969|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_002600|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L20966|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037341|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##CR749667|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC071607|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC036108|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	1.55521	CTCF.p2:13:0.999	CTCF.p2:-45:0.556
chr6	8219713	8219842	reg1002932.p1	14.202	+	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-116987	-	TSC_hg19_v1_chr6_-_8064644 AK301142 AF426434 NM_001199322 NM_001199323 NM_201280	-155117	-	TSC_hg19_v1_chr6_-_8064623 BC052310 AK025442 BC032438 CR749569 BX647336 BC119645 BC119644	-155176	-	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	215931	-	TSC_hg19_v1_chr6_+_8435870 BC040612	216111	+	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	2192839	-	AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AK301142|MUTED|63915|muted homolog (mouse)##AF426434|MUTED|63915|muted homolog (mouse)##NM_001199322|MUTED|63915|muted homolog (mouse)##NM_001199323|MUTED|63915|muted homolog (mouse)##NM_201280|MUTED|63915|muted homolog (mouse)##BC052310|MUTED-TXNDC5|100526836|MUTED-TXNDC5 readthrough (non-protein coding)##AK025442|MUTED|63915|muted homolog (mouse)##BC032438|MUTED|63915|muted homolog (mouse)##CR749569|MUTED|63915|muted homolog (mouse)##BX647336|MUTED|63915|muted homolog (mouse)##BC119645|MUTED|63915|muted homolog (mouse)##BC119644|MUTED|63915|muted homolog (mouse)##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.993672	CTCF.p2:7:0.994
chr10	47599908	47600025	reg1002404.p1	14.201	+	BC171820 BC171845 BC171847 NM_001190810	-386341	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	-418282	-	AB590156 CU687256 DQ893430 DQ896775 M81844 AK296573 AK300139 AK300158 BC021910 BC004376 NM_001098845 AK296976 Z36830 BC073755 NM_001040084 AK298761	-425947	-	NM_001630 BC008813 BC073755 AK096715 AK313626 X16662 BC029890 AK300191 AK223149 AK307182 CU679125 CU687256	147049	+	NM_018232	294056	+	BC171820 BC171845 BC171847 NM_001190810	615757	+	BC171845|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171847|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##NM_001190810|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##DQ893430|ANXA8L2|244|annexin A8-like 2##DQ896775|ANXA8|653145|annexin A8##M81844|ANXA8|653145|annexin A8##AK296573|ANXA8|653145|annexin A8##AK300139|ANXA8|653145|annexin A8##AK300158|ANXA8|653145|annexin A8##BC004376|ANXA8|653145|annexin A8##NM_001098845|ANXA8L1|728113|annexin A8-like 1##Z36830|ANXA8|653145|annexin A8##BC073755|ANXA8|653145|annexin A8##NM_001040084|ANXA8|653145|annexin A8##AK298761|ANXA8|653145|annexin A8##NM_001630|ANXA8L2|244|annexin A8-like 2##BC008813|ANXA8L2|244|annexin A8-like 2##BC073755|ANXA8|653145|annexin A8##AK313626|ANXA8L2|244|annexin A8-like 2##X16662|ANXA8L2|244|annexin A8-like 2##AK300191|ANXA8L2|244|annexin A8-like 2##AK223149|ANXA8L2|244|annexin A8-like 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##BC171845|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171847|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##NM_001190810|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9	0.0	
chr14	62593698	62593831	reg1004009.p1	14.201	+	TSC_hg19_v1_chr14_+_62584125 BX248751	-9606	+	AJ617628 NM_031914 BC117363 BC143598 HQ258344 AB102949	-131126	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	-364645	+	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	918165	-	AK074484 NM_172376	974819	-	NM_020663 AF087862 AK027351 AK027278 BC062575 AB209218 AF309563	1077417	+	BX248751|FLJ43390|646113|uncharacterized LOC646113##AJ617628|SYT16|83851|synaptotagmin XVI##NM_031914|SYT16|83851|synaptotagmin XVI##BC117363|SYT16|83851|synaptotagmin XVI##BC143598|SYT16|83851|synaptotagmin XVI##HQ258344|SYT16|83851|synaptotagmin XVI##AB102949|SYT16|83851|synaptotagmin XVI##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AK074484|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172376|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_020663|RHOJ|57381|ras homolog gene family, member J##AF087862|RHOJ|57381|ras homolog gene family, member J##AK027351|RHOJ|57381|ras homolog gene family, member J##AK027278|RHOJ|57381|ras homolog gene family, member J##BC062575|RHOJ|57381|ras homolog gene family, member J##AB209218|RHOJ|57381|ras homolog gene family, member J##AF309563|RHOJ|57381|ras homolog gene family, member J	0.907681	CTCF.p2:12:0.908
chr12	32518528	32518650	reg1003886.p1	14.200	+	AK313430 AK290188 NM_001003398 NM_001714 U90028 BC136372 TSC_hg19_v1_chr12_+_32260263	-258416	+	TSC_hg19_v1_chr12_+_32259750 BC010091	-258875	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	-406195	+	BC039708 BC063403 NM_139241 BC096746 AK057294 BC045552	136450	+	TSC_hg19_v1_chr12_+_32687260 AK303334	168674	+	TSC_hg19_v1_chr12_+_32832187 AK302565 NM_005690 NM_012062 NM_012063 AK311606	313568	+	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)##U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK303334|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK302565|DNM1L|10059|dynamin 1-like##NM_005690|DNM1L|10059|dynamin 1-like##NM_012062|DNM1L|10059|dynamin 1-like##NM_012063|DNM1L|10059|dynamin 1-like##AK311606|DNM1L|10059|dynamin 1-like	0.10863	
chr19	50964587	50964701	reg1003619.p1	14.200	+	BC094690 NM_004533 BC130536 BC136389 X73113 HQ258536	-28460	+	AK225720 NM_001243998 NM_001243999 NM_001244000 NM_003121 TSC_hg19_v1_chr19_+_50922194 AK225225 AK292644 AK300639 EU446656 X66079 X96998 BC007921	-42440	+	NM_002691 TSC_hg19_v1_chr19_+_50887592 M80397 M81735 BC008800	-77040	+	AK131032 BC004941 TSC_hg19_v1_chr19_-_50979494 BC012203 AK125745	14865	-	BC062607 TSC_hg19_v1_chr19_+_50979762 NM_175063 NM_206538 AY761095 AY761097	15065	+	TSC_hg19_v1_chr19_+_50979781 AY358710	15132	+	NM_004533|MYBPC2|4606|myosin binding protein C, fast type##BC130536|MYBPC2|4606|myosin binding protein C, fast type##BC136389|MYBPC2|4606|myosin binding protein C, fast type##X73113|MYBPC2|4606|myosin binding protein C, fast type##HQ258536|MYBPC2|4606|myosin binding protein C, fast type##AK225720|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_001243998|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_001243999|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_001244000|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_003121|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##AK225225|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##AK292644|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##AK300639|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##EU446656|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##X66079|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##X96998|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##BC007921|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_002691|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##M80397|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##M81735|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##BC008800|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##AK131032|FAM71E1|112703|family with sequence similarity 71, member E1##BC004941|FAM71E1|112703|family with sequence similarity 71, member E1##BC012203|FAM71E1|112703|family with sequence similarity 71, member E1##AK125745|FAM71E1|112703|family with sequence similarity 71, member E1##BC062607|C19orf63|284361|chromosome 19 open reading frame 63##NM_175063|C19orf63|284361|chromosome 19 open reading frame 63##NM_206538|C19orf63|284361|chromosome 19 open reading frame 63##AY761095|C19orf63|284361|chromosome 19 open reading frame 63##AY761097|C19orf63|284361|chromosome 19 open reading frame 63##AY358710|C19orf63|284361|chromosome 19 open reading frame 63	0.959227	CTCF.p2:7:0.959
chrX	9956949	9957066	reg1002860.p1	14.199	+	NM_001195081	-21610	+	BC140866 TSC_hg19_v1_chrX_+_9754543	-202464	+	TSC_hg19_v1_chrX_+_9754468 NM_001649 X83543	-202527	+	BC098455 NM_015691	26786	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	168047	+	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	578552	-	NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##BC140866|SHROOM2|357|shroom family member 2##NM_001649|SHROOM2|357|shroom family member 2##X83543|SHROOM2|357|shroom family member 2##BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)	0.889352	CTCF.p2:-7:0.889
chr16	23445754	23445887	reg1004217.p1	14.198	+	NM_000336 BC036352 X87159 AK313192	-132193	+	U48936 BC059391 NM_001039 TSC_hg19_v1_chr16_+_23194066	-251768	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	-285271	-	TSC_hg19_v1_chr16_-_23464487 BC000549 BC037563 NM_153603	18675	-	TSC_hg19_v1_chr16_-_23521748 AB384559 CU674130 DQ892534 DQ895745 BC050620 AF165531	75915	-	AF190863 AF323754 AF233522 TSC_hg19_v1_chr16_-_23521769	75942	-	NM_000336|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC036352|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##X87159|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##AK313192|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##U48936|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##BC059391|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_001039|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31##BC000549|COG7|91949|component of oligomeric golgi complex 7##BC037563|COG7|91949|component of oligomeric golgi complex 7##NM_153603|COG7|91949|component of oligomeric golgi complex 7##DQ892534|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##DQ895745|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##BC050620|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF165531|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF190863|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF323754|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF233522|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	0.99212	CTCF.p2:-3:0.992
chr6	17815699	17815809	reg1002911.p2	14.198	+	Z25535 AB384675 AK295644 BC052965 NM_005124 TSC_hg19_v1_chr6_-_17707139 AB210024	-108852	-	TSC_hg19_v1_chr6_+_17600620 NM_016255 AK296393 AK312814 AF097027 BC047881	-215155	+	AK312362 NM_006366 TSC_hg19_v1_chr6_+_17393918 AL832154 AK295600 AK294215 AK293134 AK297538 AK308461 BC008481	-421972	+	AJ291578 AJ291579 BC127115 BC127116 AY014403 AY014404 TSC_hg19_v1_chr6_-_17987786	172006	-	TSC_hg19_v1_chr6_-_17987867 BC062673 NM_001105566 NM_001105567 NM_001105568 NM_001243423 NM_022113	172112	-	AY324850 BC103888 BC103889 BC103890 NM_198586	307096	-	Z25535|NUP153|9972|nucleoporin 153kDa##AK295644|NUP153|9972|nucleoporin 153kDa##BC052965|NUP153|9972|nucleoporin 153kDa##NM_005124|NUP153|9972|nucleoporin 153kDa##AB210024|NUP153|9972|nucleoporin 153kDa##NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1##AK296393|FAM8A1|51439|family with sequence similarity 8, member A1##AK312814|FAM8A1|51439|family with sequence similarity 8, member A1##AF097027|FAM8A1|51439|family with sequence similarity 8, member A1##BC047881|FAM8A1|51439|family with sequence similarity 8, member A1##AK312362|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##NM_006366|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AL832154|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK295600|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK294215|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK293134|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK297538|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK308461|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##BC008481|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AJ291578|KIF13A|63971|kinesin family member 13A##AJ291579|KIF13A|63971|kinesin family member 13A##BC127115|KIF13A|63971|kinesin family member 13A##BC127116|KIF13A|63971|kinesin family member 13A##AY014403|KIF13A|63971|kinesin family member 13A##AY014404|KIF13A|63971|kinesin family member 13A##BC062673|KIF13A|63971|kinesin family member 13A##NM_001105566|KIF13A|63971|kinesin family member 13A##NM_001105567|KIF13A|63971|kinesin family member 13A##NM_001105568|KIF13A|63971|kinesin family member 13A##NM_001243423|KIF13A|63971|kinesin family member 13A##NM_022113|KIF13A|63971|kinesin family member 13A##AY324850|NHLRC1|378884|NHL repeat containing 1##BC103888|NHLRC1|378884|NHL repeat containing 1##BC103889|NHLRC1|378884|NHL repeat containing 1##BC103890|NHLRC1|378884|NHL repeat containing 1##NM_198586|NHLRC1|378884|NHL repeat containing 1	0.957154	CTCF.p2:5:0.957
chr11	117688561	117688674	reg1002956.p2	14.197	+	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	-20658	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	-20764	-	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-489786	+	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	6817	-	BT006721 BC005302 NM_021603	10149	-	AL136699 TSC_hg19_v1_chr11_-_117747374 AY358976 BC018652 BC093040 AK311736 AL832811 AK290757	58772	-	AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2##BT006721|FXYD2|486|FXYD domain containing ion transport regulator 2##BC005302|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_021603|FXYD2|486|FXYD domain containing ion transport regulator 2##AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6##AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6	0.987272	CTCF.p2:7:0.987
chr10	109169429	109169568	reg1004432.p1	14.196	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-245122	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-710439	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-2768453	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	2513711	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	2513779	-	NM_019903 AB209810 BC057285	2596283	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.228052	CTCF.p2:-18:0.228
chr19	33732667	33732828	reg1003164.p1	14.196	+	CU690138 AK316594 TSC_hg19_v1_chr19_-_33716685 BC035627 AK307527 AB037670 AJ277731 BC022457 NM_019849	-16065	-	TSC_hg19_v1_chr19_+_33697959 AF085860	-34751	+	AB009462 NM_002333 BC007408 TSC_hg19_v1_chr19_+_33685676 EU176387 AK296536	-47144	+	AB590467 TSC_hg19_v1_chr19_-_33793398	60616	-	BC027902 BC063874 NM_004364 TSC_hg19_v1_chr19_-_33793437	60686	-	TSC_hg19_v1_chr19_-_33793441 Y11525	60708	-	AK316594|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##BC035627|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##AK307527|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##AB037670|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##AJ277731|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##BC022457|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##NM_019849|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##AF085860|LRP3|4037|low density lipoprotein receptor-related protein 3##AB009462|LRP3|4037|low density lipoprotein receptor-related protein 3##NM_002333|LRP3|4037|low density lipoprotein receptor-related protein 3##BC007408|LRP3|4037|low density lipoprotein receptor-related protein 3##EU176387|LRP3|4037|low density lipoprotein receptor-related protein 3##AK296536|LRP3|4037|low density lipoprotein receptor-related protein 3##BC027902|CEBPA|1050|CCAAT/enhancer binding protein (C/EBP), alpha##BC063874|CEBPA|1050|CCAAT/enhancer binding protein (C/EBP), alpha##NM_004364|CEBPA|1050|CCAAT/enhancer binding protein (C/EBP), alpha##Y11525|CEBPA|1050|CCAAT/enhancer binding protein (C/EBP), alpha	0.989261	CTCF.p2:-18:0.989
chr4	89436919	89437035	reg1002757.p2	14.196	+	TSC_hg19_v1_chr4_+_89378269 AY337518 NM_016323 AB027289 BC140716	-58655	+	TSC_hg19_v1_chr4_+_89300147 AK092403 AX747525 BX647121	-136811	+	AK295832 TSC_hg19_v1_chr4_+_89300006 BC042047	-136980	+	TSC_hg19_v1_chr4_-_89444916 AB206972 BC007876 AK312082	7944	-	TSC_hg19_v1_chr4_-_89444931 NM_001042616 NM_032906	7975	-	AK296379 TSC_hg19_v1_chr4_+_89513611 AK289990 BC038960 D25215 NM_014606	76644	+	AY337518|HERC5|51191|hect domain and RLD 5##NM_016323|HERC5|51191|hect domain and RLD 5##AB027289|HERC5|51191|hect domain and RLD 5##BC140716|HERC5|51191|hect domain and RLD 5##AK092403|HERC6|55008|hect domain and RLD 6##BX647121|HERC6|55008|hect domain and RLD 6##AK295832|HERC6|55008|hect domain and RLD 6##BC042047|HERC6|55008|hect domain and RLD 6##AB206972|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##BC007876|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AK312082|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_001042616|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_032906|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AK296379|HERC3|8916|hect domain and RLD 3##AK289990|HERC3|8916|hect domain and RLD 3##BC038960|HERC3|8916|hect domain and RLD 3##D25215|HERC3|8916|hect domain and RLD 3##NM_014606|HERC3|8916|hect domain and RLD 3	0.997452	CTCF.p2:9:0.997
chr17	25928846	25928990	reg1004010.p1	14.194	+	BC035488 BC042106 NM_014238	-129889	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-307637	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-307796	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	29250	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	29285	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	29310	+	BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.999898	CTCF.p2:8:1.000
chr1	113683258	113683383	reg1003727.p1	14.193	+	TSC_hg19_v1_chr1_+_113615865 BC117368 BC117370 AB527394	-67374	+	TSC_hg19_v1_chr1_+_113615809 AK291031 CR936669 AB018349 NM_014813 AL161998	-67505	+	TSC_hg19_v1_chr1_+_113499054 BC023568 BC047723 BC062295 BX648855	-184287	+	BC130409 BC144144 NM_001142782 NM_152900	250154	+	TSC_hg19_v1_chr1_-_114301772 NM_006608	618451	-	TSC_hg19_v1_chr1_-_114302096 BC002447	618820	-	BC117368|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC117370|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AK291031|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##CR936669|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AB018349|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##NM_014813|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AL161998|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC062295|LOC100506392|100506392|uncharacterized LOC100506392##BX648855|LOC100506392|100506392|uncharacterized LOC100506392##BC130409|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##BC144144|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_001142782|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_152900|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_006608|PHTF1|10745|putative homeodomain transcription factor 1##BC002447|PHTF1|10745|putative homeodomain transcription factor 1	0.836715	CTCF.p2:-6:0.837
chr12	24931973	24932079	reg1003239.p2	14.193	+	BC104436 BC104437 TSC_hg19_v1_chr12_-_24737100 AK057456	-194933	-	TSC_hg19_v1_chr12_-_24715349 AB081588 NM_152989 BC060773	-216661	-	BC014929 TSC_hg19_v1_chr12_-_24103967 AK303970	-828065	-	TSC_hg19_v1_chr12_-_25055230 CR749308 BC033864 NM_001178094	123248	-	TSC_hg19_v1_chr12_-_25055966 AK294879 NM_001178093	123961	-	TSC_hg19_v1_chr12_-_25101988 AK299088	169930	-	BC104436|LINC00477|144360|long intergenic non-protein coding RNA 477##BC104437|LINC00477|144360|long intergenic non-protein coding RNA 477##AK057456|LINC00477|144360|long intergenic non-protein coding RNA 477##AB081588|SOX5|6660|SRY (sex determining region Y)-box 5##NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5##BC060773|SOX5|6660|SRY (sex determining region Y)-box 5##BC014929|SOX5|6660|SRY (sex determining region Y)-box 5##AK303970|SOX5|6660|SRY (sex determining region Y)-box 5##CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK294879|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178093|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK299088|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	0.109351	
chr16	46963747	46963878	reg1004287.p1	14.193	+	NM_001142466 AK094971	-44710	+	TSC_hg19_v1_chr16_+_46918291 AY029173 NM_133443 BC062555	-45531	+	TSC_hg19_v1_chr16_-_46865090 CU691166 BC056676 BX647945 NM_001001436	-98724	-	TSC_hg19_v1_chr16_-_47005340 Y13350	41536	-	CU677459 AF011793 AJ001309 TSC_hg19_v1_chr16_-_47007561	43710	-	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	43783	-	NM_001142466|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##AK094971|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##AY029173|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##NM_133443|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##BC062555|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##BC056676|C16orf87|388272|chromosome 16 open reading frame 87##BX647945|C16orf87|388272|chromosome 16 open reading frame 87##NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87##Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AJ001309|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2	0.998338	CTCF.p2:-3:0.998
chr13	32884366	32884491	reg1002835.p1	14.192	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	-278987	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-463526	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-570715	+	BC146956 BC146965 NM_001136571	1661	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	5189	+	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	117930	-	AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1	0.722364	CTCF.p2:0:0.722
chr1	37953090	37953223	reg1004044.p1	14.192	+	FJ695517 TSC_hg19_v1_chr1_+_37940180 AK093343 AX748065 BC005001	-12969	+	TSC_hg19_v1_chr1_+_37940140 AK026884	-13006	+	TSC_hg19_v1_chr1_+_37940118 NM_025079	-13059	+	AY211926 AY007166 DQ099384 TSC_hg19_v1_chr1_-_37980356 AB463504 CU677607 EU831681 EU832519 EU832600 AK021792 AK225434 AK225598 AK308118 BX538212 BX640719 NM_022756 BC016328 BC056406 AK309663	27211	-	CU693250 AB464215 AY081909 TSC_hg19_v1_chr1_-_38019895 AK297176 AK300796 AK027622 AK022615 BC027040 NM_024700 AK293229 AK315574	66735	-	TSC_hg19_v1_chr1_+_38022531 BX647913 NM_003462 BC039074 AF006386 AK225935 AK299918 BC046117 AK290502 AK295199	69404	+	FJ695517|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK093343|ZC3H12A|80149|zinc finger CCCH-type containing 12A##BC005001|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AY211926|MEAF6|64769|MYST/Esa1-associated factor 6##AY007166|MEAF6|64769|MYST/Esa1-associated factor 6##DQ099384|MEAF6|64769|MYST/Esa1-associated factor 6##EU831681|MEAF6|64769|MYST/Esa1-associated factor 6##EU832519|MEAF6|64769|MYST/Esa1-associated factor 6##EU832600|MEAF6|64769|MYST/Esa1-associated factor 6##AK021792|MEAF6|64769|MYST/Esa1-associated factor 6##AK225434|MEAF6|64769|MYST/Esa1-associated factor 6##AK225598|MEAF6|64769|MYST/Esa1-associated factor 6##AK308118|MEAF6|64769|MYST/Esa1-associated factor 6##BX538212|MEAF6|64769|MYST/Esa1-associated factor 6##BX640719|MEAF6|64769|MYST/Esa1-associated factor 6##NM_022756|MEAF6|64769|MYST/Esa1-associated factor 6##BC016328|MEAF6|64769|MYST/Esa1-associated factor 6##BC056406|MEAF6|64769|MYST/Esa1-associated factor 6##AK309663|MEAF6|64769|MYST/Esa1-associated factor 6##AY081909|SNIP1|79753|Smad nuclear interacting protein 1##AK297176|SNIP1|79753|Smad nuclear interacting protein 1##AK300796|SNIP1|79753|Smad nuclear interacting protein 1##AK027622|SNIP1|79753|Smad nuclear interacting protein 1##AK022615|SNIP1|79753|Smad nuclear interacting protein 1##BC027040|SNIP1|79753|Smad nuclear interacting protein 1##NM_024700|SNIP1|79753|Smad nuclear interacting protein 1##AK293229|SNIP1|79753|Smad nuclear interacting protein 1##AK315574|SNIP1|79753|Smad nuclear interacting protein 1##BX647913|DNALI1|7802|dynein, axonemal, light intermediate chain 1##NM_003462|DNALI1|7802|dynein, axonemal, light intermediate chain 1##BC039074|DNALI1|7802|dynein, axonemal, light intermediate chain 1##AF006386|DNALI1|7802|dynein, axonemal, light intermediate chain 1##AK225935|DNALI1|7802|dynein, axonemal, light intermediate chain 1##AK299918|DNALI1|7802|dynein, axonemal, light intermediate chain 1##BC046117|DNALI1|7802|dynein, axonemal, light intermediate chain 1##AK290502|DNALI1|7802|dynein, axonemal, light intermediate chain 1##AK295199|DNALI1|7802|dynein, axonemal, light intermediate chain 1	0.803484	CTCF.p2:0:0.803
chr3	66327252	66327386	reg1003862.p1	14.191	+	NM_001164796	-56152	+	AK092495 AX747571 NM_173471	-208035	+	BC062367 NM_001033057 NM_004742 NM_015520 TSC_hg19_v1_chr3_-_66024518	-302806	-	TSC_hg19_v1_chr3_+_66444897 AB075504	117640	+	AF381545 BC140907 NM_015541 AY730707	223533	-	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	224145	-	NM_001164796|SLC25A26|115286|solute carrier family 25, member 26##AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1	0.047675	
chr22	18268142	18268265	reg1002608.p1	14.190	+	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-10869	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-10980	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	-10996	-	TSC_hg19_v1_chr22_-_18484268 AK127487	216025	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	239058	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	292485	+	BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26	0.99148	CTCF.p2:-33:0.991
chr10	49760027	49760159	reg1003100.p1	14.188	+	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	-150421	+	TSC_hg19_v1_chr10_+_49514722 AK292523	-245307	+	CR749241 NM_001018071	-277167	-	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	52994	-	TSC_hg19_v1_chr10_-_49864302 AK055937	104212	-	TSC_hg19_v1_chr10_+_49892917 BC034937	132797	+	BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##AK292523|MAPK8|5599|mitogen-activated protein kinase 8##CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22##AK055937|ARHGAP22|58504|Rho GTPase activating protein 22##BC034937|WDFY4|57705|WDFY family member 4	0.998258	CTCF.p2:-13:0.998
chr13	28404201	28404338	reg1004603.p1	14.188	+	AB044157 NM_145657 AB463700	-37468	+	AK000623 TSC_hg19_v1_chr13_+_28196032 AB464657 AB527907 CU677257	-208195	+	TSC_hg19_v1_chr13_+_28196028 AF077044 AK097973 AK311833	-208243	+	TSC_hg19_v1_chr13_+_28494136 NM_000209 X99894 U30329 U35632 AB464648	89935	+	CU677005 AB463470 DQ893626 EU176674 U51096 TSC_hg19_v1_chr13_-_28543282	138943	-	TSC_hg19_v1_chr13_-_28543325 BC014461 NM_001265	139039	-	AB044157|GSX1|219409|GS homeobox 1##NM_145657|GSX1|219409|GS homeobox 1##AK000623|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AF077044|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK097973|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK311833|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##NM_000209|PDX1|3651|pancreatic and duodenal homeobox 1##X99894|PDX1|3651|pancreatic and duodenal homeobox 1##U30329|PDX1|3651|pancreatic and duodenal homeobox 1##U35632|PDX1|3651|pancreatic and duodenal homeobox 1##DQ893626|CDX2|1045|caudal type homeobox 2##EU176674|CDX2|1045|caudal type homeobox 2##U51096|CDX2|1045|caudal type homeobox 2##BC014461|CDX2|1045|caudal type homeobox 2##NM_001265|CDX2|1045|caudal type homeobox 2	1.01192	CTCF.p2:-5:0.993
chr15	63385897	63386022	reg1003904.p1	14.188	+	TSC_hg19_v1_chr15_+_63340667 AB209041 NM_001018008 BC053545 BC050473 AK301319 AK298625 AB385207 CU690980 DQ424903 EU832801 GQ129381 L02922 AF474156	-45270	+	M19715 TSC_hg19_v1_chr15_+_63336282	-49681	+	L02923 TSC_hg19_v1_chr15_+_63335956	-50001	+	NM_032857 NM_171846 BC067288 TSC_hg19_v1_chr15_+_63414026 AK027808	28057	+	TSC_hg19_v1_chr15_+_63414037 AY358709 BC037198	28094	+	BC031307 TSC_hg19_v1_chr15_-_63449677 AF070668 BC003667 BC047648 AK024591 NM_015920	63650	-	AB209041|TPM1|7168|tropomyosin 1 (alpha)##NM_001018008|TPM1|7168|tropomyosin 1 (alpha)##BC053545|TPM1|7168|tropomyosin 1 (alpha)##BC050473|TPM1|7168|tropomyosin 1 (alpha)##AK301319|TPM1|7168|tropomyosin 1 (alpha)##AK298625|TPM1|7168|tropomyosin 1 (alpha)##DQ424903|TPM1|7168|tropomyosin 1 (alpha)##EU832801|TPM1|7168|tropomyosin 1 (alpha)##GQ129381|TPM1|7168|tropomyosin 1 (alpha)##L02922|TPM1|7168|tropomyosin 1 (alpha)##AF474156|TPM1|7168|tropomyosin 1 (alpha)##M19715|TPM1|7168|tropomyosin 1 (alpha)##L02923|TPM1|7168|tropomyosin 1 (alpha)##NM_032857|LACTB|114294|lactamase, beta##NM_171846|LACTB|114294|lactamase, beta##BC067288|LACTB|114294|lactamase, beta##AK027808|LACTB|114294|lactamase, beta##AY358709|LACTB|114294|lactamase, beta##BC037198|LACTB|114294|lactamase, beta##BC031307|RPS27L|51065|ribosomal protein S27-like##AF070668|RPS27L|51065|ribosomal protein S27-like##BC003667|RPS27L|51065|ribosomal protein S27-like##BC047648|RPS27L|51065|ribosomal protein S27-like##AK024591|RPS27L|51065|ribosomal protein S27-like##NM_015920|RPS27L|51065|ribosomal protein S27-like	0.997892	CTCF.p2:10:0.998
chr11	66095905	66096025	reg1002783.p1	14.187	+	BC051340 AF279142 TSC_hg19_v1_chr11_-_66084516 AJ295846 BC098158 BC104484 BC105633 NM_020404	-11453	-	TSC_hg19_v1_chr11_+_66059364 NM_153266	-36591	+	TSC_hg19_v1_chr11_+_66059337 BC033898	-36627	+	DQ893675 DQ895838 AB590240 AK297757 TSC_hg19_v1_chr11_-_66103914 BC014417 L36463 NM_004292	7971	-	BC009834 TSC_hg19_v1_chr11_-_66112576 AF159141 AK310991 NM_001024957 NM_015399	16595	-	CU692428 DQ892706 DQ895957 AK075354 AK098779 AK225182 TSC_hg19_v1_chr11_-_66115101 AK294604 BC021965 AK293715 AF029893 AK098389 NM_006876	19126	-	BC051340|CD248|57124|CD248 molecule, endosialin##AF279142|CD248|57124|CD248 molecule, endosialin##AJ295846|CD248|57124|CD248 molecule, endosialin##BC104484|CD248|57124|CD248 molecule, endosialin##BC105633|CD248|57124|CD248 molecule, endosialin##NM_020404|CD248|57124|CD248 molecule, endosialin##NM_153266|TMEM151A|256472|transmembrane protein 151A##BC033898|TMEM151A|256472|transmembrane protein 151A##DQ893675|RIN1|9610|Ras and Rab interactor 1##DQ895838|RIN1|9610|Ras and Rab interactor 1##AK297757|RIN1|9610|Ras and Rab interactor 1##BC014417|RIN1|9610|Ras and Rab interactor 1##L36463|RIN1|9610|Ras and Rab interactor 1##NM_004292|RIN1|9610|Ras and Rab interactor 1##BC009834|BRMS1|25855|breast cancer metastasis suppressor 1##AF159141|BRMS1|25855|breast cancer metastasis suppressor 1##AK310991|BRMS1|25855|breast cancer metastasis suppressor 1##NM_001024957|BRMS1|25855|breast cancer metastasis suppressor 1##NM_015399|BRMS1|25855|breast cancer metastasis suppressor 1##DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1	1.018346	CTCF.p2:2:0.999
chr10	105176747	105176855	reg1003152.p2	14.185	+	TSC_hg19_v1_chr10_+_105156433 BC111040 D80007	-20357	+	TSC_hg19_v1_chr10_+_105156421 BC064486 BC080560	-20383	+	AK293772 AK294971 TSC_hg19_v1_chr10_+_105156399 AK307418 BC049838 NM_014976	-20404	+	AF131810 TSC_hg19_v1_chr10_-_105212068 BC000039	35263	-	TSC_hg19_v1_chr10_-_105212166 AK022195 NM_015916	35362	-	BC036193 BC036208 NM_001001412	41844	-	BC111040|PDCD11|22984|programmed cell death 11##D80007|PDCD11|22984|programmed cell death 11##BC064486|PDCD11|22984|programmed cell death 11##BC080560|PDCD11|22984|programmed cell death 11##AK294971|PDCD11|22984|programmed cell death 11##AK307418|PDCD11|22984|programmed cell death 11##BC049838|PDCD11|22984|programmed cell death 11##NM_014976|PDCD11|22984|programmed cell death 11##AF131810|CALHM2|51063|calcium homeostasis modulator 2##BC000039|CALHM2|51063|calcium homeostasis modulator 2##AK022195|CALHM2|51063|calcium homeostasis modulator 2##NM_015916|CALHM2|51063|calcium homeostasis modulator 2##BC036193|CALHM1|255022|calcium homeostasis modulator 1##BC036208|CALHM1|255022|calcium homeostasis modulator 1##NM_001001412|CALHM1|255022|calcium homeostasis modulator 1	0.943257	CTCF.p2:-1:0.943
chr1	182564909	182565041	reg1004423.p1	14.182	+	AK315231 BC090934 TSC_hg19_v1_chr1_-_182558392 CR627369 NM_021133	-6592	-	NM_001137669 AK302768 BC142944 AL136902	-145702	+	AJ515384 NM_172000	-195225	-	CU675308 TSC_hg19_v1_chr1_+_182569465	4471	+	AF493937 BT006638 CU675307 AB528682 U94829 U70426 BC006243 TSC_hg19_v1_chr1_-_182573525 AK301261 AK311880 NM_002928	8495	-	BC069677 BC069718 BC103865 BC103866 BC103867 AF297015 NM_001102450 NM_033345	77066	-	AK315231|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##BC090934|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##CR627369|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##NM_021133|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##NM_001137669|RGSL1|353299|regulator of G-protein signaling like 1##AK302768|RGSL1|353299|regulator of G-protein signaling like 1##BC142944|RGSL1|353299|regulator of G-protein signaling like 1##AL136902|RGSL1|353299|regulator of G-protein signaling like 1##AJ515384|TEDDM1|127670|transmembrane epididymal protein 1##NM_172000|TEDDM1|127670|transmembrane epididymal protein 1##AF493937|RGS16|6004|regulator of G-protein signaling 16##BT006638|RGS16|6004|regulator of G-protein signaling 16##U94829|RGS16|6004|regulator of G-protein signaling 16##U70426|RGS16|6004|regulator of G-protein signaling 16##BC006243|RGS16|6004|regulator of G-protein signaling 16##AK301261|RGS16|6004|regulator of G-protein signaling 16##AK311880|RGS16|6004|regulator of G-protein signaling 16##NM_002928|RGS16|6004|regulator of G-protein signaling 16##BC069677|RGS8|85397|regulator of G-protein signaling 8##BC069718|RGS8|85397|regulator of G-protein signaling 8##BC103865|RGS8|85397|regulator of G-protein signaling 8##BC103866|RGS8|85397|regulator of G-protein signaling 8##BC103867|RGS8|85397|regulator of G-protein signaling 8##AF297015|RGS8|85397|regulator of G-protein signaling 8##NM_001102450|RGS8|85397|regulator of G-protein signaling 8##NM_033345|RGS8|85397|regulator of G-protein signaling 8	0.0	
chr17	10231006	10231142	reg1004129.p1	14.182	+	TSC_hg19_v1_chr17_-_10101924 AY327406 NM_201433	-129168	-	TSC_hg19_v1_chr17_-_9940004 AK057761 BC006454 NM_201432	-291041	-	TSC_hg19_v1_chr17_-_9939883 AK292987	-291196	-	AF111782 NM_003802	45247	-	AK303395 NM_002472	94192	-	AF111783 NM_017533	141801	-	AY327406|GAS7|8522|growth arrest-specific 7##NM_201433|GAS7|8522|growth arrest-specific 7##AK057761|GAS7|8522|growth arrest-specific 7##BC006454|GAS7|8522|growth arrest-specific 7##NM_201432|GAS7|8522|growth arrest-specific 7##AK292987|GAS7|8522|growth arrest-specific 7##AF111782|MYH13|8735|myosin, heavy chain 13, skeletal muscle##NM_003802|MYH13|8735|myosin, heavy chain 13, skeletal muscle##AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle	1.73327	CTCF.p2:0:0.993	CTCF.p2:31:0.740
chr2	137136431	137136570	reg1003615.p1	14.182	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-260824	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-262702	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-393284	-	TSC_hg19_v1_chr2_+_137523114 AK299929	386616	+	NM_001080427	611961	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1585434	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.998877	CTCF.p2:26:0.999
chr9	135111881	135111993	reg1002522.p1	14.182	+	AB058760 NM_032536 TSC_hg19_v1_chr9_+_135037469	-74534	+	TSC_hg19_v1_chr9_+_135037083 AY358165	-74846	+	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	-156687	-	TSC_hg19_v1_chr9_-_135230312 AK125448	118293	-	TSC_hg19_v1_chr9_-_135230352 AK307608 BX537849	118411	-	TSC_hg19_v1_chr9_-_135230374 BX538166 NM_015046	118470	-	AB058760|NTNG2|84628|netrin G2##NM_032536|NTNG2|84628|netrin G2##AY358165|NTNG2|84628|netrin G2##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AK125448|SETX|23064|senataxin##AK307608|SETX|23064|senataxin##BX537849|SETX|23064|senataxin##BX538166|SETX|23064|senataxin##NM_015046|SETX|23064|senataxin	0.99892	CTCF.p2:16:0.999
chr8	125050117	125050251	reg1004741.p3	14.181	+	AB196633 NM_001039112	-185958	+	TSC_hg19_v1_chr8_+_124780758 DQ228141 NM_144963 BC144630	-269371	+	TSC_hg19_v1_chr8_+_124780681 AK300603 BC030520	-269494	+	BC101502 BC101506 AK057332 TSC_hg19_v1_chr8_-_125183771	133554	-	TSC_hg19_v1_chr8_-_125384925 BC041379 NM_194291	334768	-	TSC_hg19_v1_chr8_+_125463060 NM_017956 AK225083 AK000779 AK222727 BC011713 BC003057	412888	+	AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)##DQ228141|FAM91A1|157769|family with sequence similarity 91, member A1##NM_144963|FAM91A1|157769|family with sequence similarity 91, member A1##BC144630|FAM91A1|157769|family with sequence similarity 91, member A1##AK300603|FAM91A1|157769|family with sequence similarity 91, member A1##BC030520|FAM91A1|157769|family with sequence similarity 91, member A1##BC101502|C8orf78|157376|chromosome 8 open reading frame 78##BC101506|C8orf78|157376|chromosome 8 open reading frame 78##AK057332|C8orf78|157376|chromosome 8 open reading frame 78##BC041379|TMEM65|157378|transmembrane protein 65##NM_194291|TMEM65|157378|transmembrane protein 65##NM_017956|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK225083|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK000779|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK222727|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC011713|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC003057|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)	0.0	
chr17	32473599	32473710	reg1003606.p1	14.180	+	AL834182 NM_183377	-853649	-	AF216311 NM_173847 BC100886 BC100887	-1154752	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-1218451	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	10033	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	108677	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	123619	+	AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7	1.004882	CTCF.p2:7:0.958
chr12	94528114	94528249	reg1004923.p1	14.178	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-456998	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-562580	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-563361	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	14323	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	325350	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	325461	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.613138	CTCF.p2:-11:0.613
chr2	120460547	120460666	reg1002992.p2	14.178	+	TSC_hg19_v1_chr2_+_120436776 AK057313 AK308503 AK311734	-23825	+	TSC_hg19_v1_chr2_+_120436745 AK130088 NM_001105198 NM_001105199 NM_030577 AK096890 AK299078 BC004404	-23872	+	AK293665 NM_001029996 TSC_hg19_v1_chr2_+_120302024 BC036530 AK304416	-158564	+	M68941 NM_002830 TSC_hg19_v1_chr2_+_120517497 AK314836 BC010674	56794	+	TSC_hg19_v1_chr2_+_120770604 NM_001184937 NM_001184939 NM_020909	309997	+	TSC_hg19_v1_chr2_+_120770652 AK023019 BC054508 AK290895 BC032822 NM_001184938	310127	+	AK057313|LOC100125918|100125918|uncharacterized LOC100125918##AK308503|TMEM177|80775|transmembrane protein 177##AK130088|TMEM177|80775|transmembrane protein 177##NM_001105198|TMEM177|80775|transmembrane protein 177##NM_001105199|TMEM177|80775|transmembrane protein 177##NM_030577|TMEM177|80775|transmembrane protein 177##AK096890|TMEM177|80775|transmembrane protein 177##AK299078|TMEM177|80775|transmembrane protein 177##BC004404|TMEM177|80775|transmembrane protein 177##AK293665|PCDP1|200373|primary ciliary dyskinesia protein 1##NM_001029996|PCDP1|200373|primary ciliary dyskinesia protein 1##BC036530|PCDP1|200373|primary ciliary dyskinesia protein 1##AK304416|PCDP1|200373|primary ciliary dyskinesia protein 1##M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_001184937|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184939|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_020909|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK023019|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC054508|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK290895|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC032822|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184938|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5	0.995573	CTCF.p2:-10:0.996
chr13	33802825	33802954	reg1002769.p1	14.176	+	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-22725	-	AY082590 BC046563 NM_001243466 NM_178007	-42674	-	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-212366	+	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	56978	-	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	121879	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	448046	-	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.182468	
chr2	220507332	220507465	reg1003257.p1	14.176	+	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-15044	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-44809	+	M13981 NM_002191 BC039076 BC006391 TSC_hg19_v1_chr2_+_220437031 BT006954 CU675381 DQ890602 DQ893773 M13144	-70352	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	1929612	-	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	2651622	-	AK057009 NM_153038 BC109388	2655514	+	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##M13981|INHA|3623|inhibin, alpha##NM_002191|INHA|3623|inhibin, alpha##BC039076|INHA|3623|inhibin, alpha##BC006391|INHA|3623|inhibin, alpha##BT006954|INHA|3623|inhibin, alpha##DQ890602|INHA|3623|inhibin, alpha##DQ893773|INHA|3623|inhibin, alpha##M13144|INHA|3623|inhibin, alpha##BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140	1.964632	CTCF.p2:9:0.997	CTCF.p2:-51:0.968
chr3	50651615	50651725	reg1002949.p1	14.174	+	NM_001243926 BC068497	-2355	+	TSC_hg19_v1_chr3_-_50649206 AF035947 D83532 BC031590 AF132297 AK313850 NM_013324 NM_145071	-2453	-	CU689192 AB528903 BC064354 TSC_hg19_v1_chr3_-_50649104	-2578	-	TSC_hg19_v1_chr3_+_50654561 NM_001243925 NM_004635	2891	+	TSC_hg19_v1_chr3_+_50654595 AK290969	2922	+	BC001662 BC010407 TSC_hg19_v1_chr3_+_50654611 BC007591 U09578	2957	+	NM_001243926|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC068497|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AF035947|CISH|1154|cytokine inducible SH2-containing protein##D83532|CISH|1154|cytokine inducible SH2-containing protein##BC031590|CISH|1154|cytokine inducible SH2-containing protein##AF132297|CISH|1154|cytokine inducible SH2-containing protein##AK313850|CISH|1154|cytokine inducible SH2-containing protein##NM_013324|CISH|1154|cytokine inducible SH2-containing protein##NM_145071|CISH|1154|cytokine inducible SH2-containing protein##BC064354|CISH|1154|cytokine inducible SH2-containing protein##NM_001243925|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##NM_004635|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AK290969|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC001662|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC010407|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC007591|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U09578|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3	0.960424	CTCF.p2:23:0.960
chr20	799777	799855	reg1002085.p1	14.173	+	AK074650 BC009750 AK291706 NM_033409	-50639	-	AY129025 NM_033129	-142994	-	AK125343 TSC_hg19_v1_chr20_-_656445	-143371	-	AK314165 NM_001042353 TSC_hg19_v1_chr20_+_814388	14568	+	BC004222 NM_207121	16894	+	NM_031424 BC022238 AB196290 DQ431181	25549	+	AK074650|C20orf54|113278|chromosome 20 open reading frame 54##BC009750|C20orf54|113278|chromosome 20 open reading frame 54##AK291706|C20orf54|113278|chromosome 20 open reading frame 54##NM_033409|C20orf54|113278|chromosome 20 open reading frame 54##AY129025|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)##NM_033129|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)##AK314165|FAM110A|83541|family with sequence similarity 110, member A##NM_001042353|FAM110A|83541|family with sequence similarity 110, member A##BC004222|FAM110A|83541|family with sequence similarity 110, member A##NM_207121|FAM110A|83541|family with sequence similarity 110, member A##NM_031424|FAM110A|83541|family with sequence similarity 110, member A##BC022238|FAM110A|83541|family with sequence similarity 110, member A##AB196290|FAM110A|83541|family with sequence similarity 110, member A##DQ431181|FAM110A|83541|family with sequence similarity 110, member A	0.81418	CTCF.p2:-2:0.814
chr16	84706029	84706159	reg1004148.p1	14.171	+	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	-23960	+	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	-54434	-	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	-54518	-	NM_005153 TSC_hg19_v1_chr16_+_84733587 BC000263	27480	+	TSC_hg19_v1_chr16_+_84733603 AK315570 CR749515	27506	+	TSC_hg19_v1_chr16_+_84733609 AK293304 AK299618	27513	+	BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)##L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_005153|USP10|9100|ubiquitin specific peptidase 10##BC000263|USP10|9100|ubiquitin specific peptidase 10##AK315570|USP10|9100|ubiquitin specific peptidase 10##CR749515|USP10|9100|ubiquitin specific peptidase 10##AK293304|USP10|9100|ubiquitin specific peptidase 10##AK299618|USP10|9100|ubiquitin specific peptidase 10	0.927078	CTCF.p2:9:0.927
chr21	43565756	43565877	reg1002896.p1	14.171	+	AB096965 AY771619 AY771620 NM_001004416 NM_173568	-74391	+	AB051810 AB051811 NM_001199527 NM_001199528	-82749	+	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	-135345	-	AF323660 NM_207627 AF323661 NM_207628	54043	+	AF323662 NM_207629	70370	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	73477	+	AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323662|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207629|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	0.999009	CTCF.p2:-20:0.999
chr5	126625750	126625866	reg1002921.p2	14.171	+	AK126569 NM_001164478 NM_001164479	-216631	-	NM_178450	-259369	-	BC146948 BC146964 AF055007 TSC_hg19_v1_chr5_-_126366251 BC047569 AK290129	-259633	-	NM_032446 CR749437 AK307919 BC020198 AB058676 BC152478	726	+	NM_130809 TSC_hg19_v1_chr5_+_126853331 AL831963 AL832056 AL832600 AJ427339 AJ441110 AJ496322 AJ515158 AJ515428 AJ515429 AK057437 BC017066	227543	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	233386	+	AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63##NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146948|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146964|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AF055007|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC047569|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK290129|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##NM_032446|MEGF10|84466|multiple EGF-like-domains 10##CR749437|MEGF10|84466|multiple EGF-like-domains 10##AK307919|MEGF10|84466|multiple EGF-like-domains 10##BC020198|MEGF10|84466|multiple EGF-like-domains 10##AB058676|MEGF10|84466|multiple EGF-like-domains 10##BC152478|MEGF10|84466|multiple EGF-like-domains 10##NM_130809|PRRC1|133619|proline-rich coiled-coil 1##AL831963|PRRC1|133619|proline-rich coiled-coil 1##AL832056|PRRC1|133619|proline-rich coiled-coil 1##AL832600|PRRC1|133619|proline-rich coiled-coil 1##AJ427339|PRRC1|133619|proline-rich coiled-coil 1##AJ441110|PRRC1|133619|proline-rich coiled-coil 1##AJ496322|PRRC1|133619|proline-rich coiled-coil 1##AJ515158|PRRC1|133619|proline-rich coiled-coil 1##AJ515428|PRRC1|133619|proline-rich coiled-coil 1##AJ515429|PRRC1|133619|proline-rich coiled-coil 1##AK057437|PRRC1|133619|proline-rich coiled-coil 1##BC017066|PRRC1|133619|proline-rich coiled-coil 1##AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1	0.128695	
chr1	119551400	119551536	reg1003300.p1	14.168	+	AK127536 NM_152380	-19290	-	AB527095 AK091816 AX747199 AY555274 BX648110 NM_206996	-823655	-	TSC_hg19_v1_chr1_+_118472364 NM_006784 AK292438 AF083217 BC128385 BC128454 BC148244	-1079090	+	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	131558	+	TSC_hg19_v1_chr1_-_119683274 BC021722 CU692202 BC039889 AK223197 AJ242739 AK296799 BC044575 AK313740 AK300295 NM_015836 NM_201263	131801	-	TSC_hg19_v1_chr1_+_119911431 AK298289 NM_001005783 NM_016527 BC020863 AF231917 AF203975 AY513277	359976	+	AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15##AK091816|SPAG17|200162|sperm associated antigen 17##AY555274|SPAG17|200162|sperm associated antigen 17##BX648110|SPAG17|200162|sperm associated antigen 17##NM_206996|SPAG17|200162|sperm associated antigen 17##NM_006784|WDR3|10885|WD repeat domain 3##AK292438|WDR3|10885|WD repeat domain 3##AF083217|WDR3|10885|WD repeat domain 3##BC021722|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC039889|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK223197|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AJ242739|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK296799|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC044575|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK313740|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK300295|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_015836|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_201263|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)##BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)	0.573243	CTCF.p2:22:0.573
chr11	62791668	62791777	reg1003109.p1	14.168	+	AK307850 AK298341 AB042505 AK298351 AK313187 BC022387 NM_001184732 NM_001184733 NM_001184736 NM_004254	-8424	-	AK298374 AF057039 AF104038 AF124373 AB009698 AB009697 AK091879 BC033682 AK055764 NM_004790 NM_153276 NM_153277 NM_153278	-39290	-	BC022984 NM_000738 AJ006520 TSC_hg19_v1_chr11_-_62689135	-102649	-	BC034394 NM_001136506	119970	-	AK127610 BC101315 BC101314 AY437532 BC101316 BC101317 NM_199352	205338	-	AK298430 AB075876 NM_001039752	265678	+	AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298374|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF057039|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF104038|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF124373|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009698|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009697|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK091879|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##BC033682|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK055764|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_004790|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153276|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153277|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153278|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1##NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1##AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1##BC034394|SLC22A24|283238|solute carrier family 22, member 24##NM_001136506|SLC22A24|283238|solute carrier family 22, member 24##AK127610|SLC22A25|387601|solute carrier family 22, member 25##BC101315|SLC22A25|387601|solute carrier family 22, member 25##BC101314|SLC22A25|387601|solute carrier family 22, member 25##AY437532|SLC22A25|387601|solute carrier family 22, member 25##BC101316|SLC22A25|387601|solute carrier family 22, member 25##BC101317|SLC22A25|387601|solute carrier family 22, member 25##NM_199352|SLC22A25|387601|solute carrier family 22, member 25##AK298430|SLC22A10|387775|solute carrier family 22, member 10##AB075876|SLC22A10|387775|solute carrier family 22, member 10##NM_001039752|SLC22A10|387775|solute carrier family 22, member 10	0.987813	CTCF.p2:6:0.988
chr17	72350310	72350430	reg1004347.p1	14.168	+	NM_153209 TSC_hg19_v1_chr17_+_72322355 BC067749 BC026362 BC110989 AK094619 BC143327 BC093631 BC104852	-27963	+	BC039582 NM_001172810 NM_023036 BC033013 AF250288	-79964	+	BX647912 NM_052869	-105866	+	NM_001080466	7587	-	BC143807 AB196530 AB528868 AY288421 NM_181790	13224	+	BC110848 BC004925 BC069202 NM_022036 BC125080 BC125081	77234	+	NM_153209|KIF19|124602|kinesin family member 19##BC067749|KIF19|124602|kinesin family member 19##BC026362|KIF19|124602|kinesin family member 19##BC110989|KIF19|124602|kinesin family member 19##AK094619|KIF19|124602|kinesin family member 19##BC143327|KIF19|124602|kinesin family member 19##BC093631|KIF19|124602|kinesin family member 19##BC104852|KIF19|124602|kinesin family member 19##BC039582|DNAI2|64446|dynein, axonemal, intermediate chain 2##NM_001172810|DNAI2|64446|dynein, axonemal, intermediate chain 2##NM_023036|DNAI2|64446|dynein, axonemal, intermediate chain 2##BC033013|DNAI2|64446|dynein, axonemal, intermediate chain 2##AF250288|DNAI2|64446|dynein, axonemal, intermediate chain 2##BX647912|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_052869|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_001080466|BTBD17|388419|BTB (POZ) domain containing 17##BC143807|GPR142|350383|G protein-coupled receptor 142##AB196530|GPR142|350383|G protein-coupled receptor 142##AY288421|GPR142|350383|G protein-coupled receptor 142##NM_181790|GPR142|350383|G protein-coupled receptor 142##BC110848|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC004925|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC069202|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_022036|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125080|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125081|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	0.934742	CTCF.p2:20:0.935
chr16	67189363	67189484	reg1004108.p1	14.167	+	AY358485 TSC_hg19_v1_chr16_-_67184866 BC012191 NM_033309	-4557	-	TSC_hg19_v1_chr16_+_67143927 CU678768	-45421	+	TSC_hg19_v1_chr16_+_67143864 AF176088 BC004556 NM_025187	-45569	+	TSC_hg19_v1_chr16_-_67193791 L41690 BC004491 AK301593	4359	-	TSC_hg19_v1_chr16_-_67193813 NM_003789	4395	-	TSC_hg19_v1_chr16_+_67193861 AK002140 BC014414 NM_018378	4444	+	AY358485|B3GNT9|84752|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9##BC012191|B3GNT9|84752|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9##NM_033309|B3GNT9|84752|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9##AF176088|C16orf70|80262|chromosome 16 open reading frame 70##BC004556|C16orf70|80262|chromosome 16 open reading frame 70##NM_025187|C16orf70|80262|chromosome 16 open reading frame 70##L41690|TRADD|8717|TNFRSF1A-associated via death domain##BC004491|TRADD|8717|TNFRSF1A-associated via death domain##AK301593|TRADD|8717|TNFRSF1A-associated via death domain##NM_003789|TRADD|8717|TNFRSF1A-associated via death domain##AK002140|FBXL8|55336|F-box and leucine-rich repeat protein 8##BC014414|FBXL8|55336|F-box and leucine-rich repeat protein 8##NM_018378|FBXL8|55336|F-box and leucine-rich repeat protein 8	0.867591	CTCF.p2:10:0.868
chr17	13498207	13498341	reg1004145.p1	14.165	+	TSC_hg19_v1_chr17_-_12921332 AK001392 NM_001165962 NM_018127 NM_173717	-576918	-	TSC_hg19_v1_chr17_-_12921325 AK298397 AK094687 BC001939 BC004158	-576955	-	TSC_hg19_v1_chr17_-_12921295 AK300011 AF304370 CR457261 CU674942	-576998	-	AY358838 TSC_hg19_v1_chr17_-_13505228 AF105376 NM_006042 AK292047	6963	-	TSC_hg19_v1_chr17_-_13972756 AK123100	474488	-	NM_001303 TSC_hg19_v1_chr17_+_13972839 AK312718	474505	+	AK001392|ELAC2|60528|elaC homolog 2 (E. coli)##NM_001165962|ELAC2|60528|elaC homolog 2 (E. coli)##NM_018127|ELAC2|60528|elaC homolog 2 (E. coli)##NM_173717|ELAC2|60528|elaC homolog 2 (E. coli)##AK298397|ELAC2|60528|elaC homolog 2 (E. coli)##AK094687|ELAC2|60528|elaC homolog 2 (E. coli)##BC001939|ELAC2|60528|elaC homolog 2 (E. coli)##BC004158|ELAC2|60528|elaC homolog 2 (E. coli)##AK300011|ELAC2|60528|elaC homolog 2 (E. coli)##AF304370|ELAC2|60528|elaC homolog 2 (E. coli)##CR457261|ELAC2|60528|elaC homolog 2 (E. coli)##AY358838|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AF105376|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_006042|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AK292047|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_001303|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK312718|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	0.997616	CTCF.p2:-2:0.998
chr12	103942522	103942635	reg1002633.p3	14.163	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	-52832	-	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-590486	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-591057	+	AY311388 AJ295695 NM_017564 AB052958	38483	+	AB032773 TSC_hg19_v1_chr12_-_104234857	292246	-	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	292401	-	AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3	0.990958	CTCF.p2:16:0.991
chr13	20737640	20737765	reg1003533.p1	14.162	+	NM_021954	-2520	-	TSC_hg19_v1_chr13_+_20532911 AJ224901 BX647944 NM_001190965	-204737	+	TSC_hg19_v1_chr13_+_20532881 AK226118 AK289741	-204818	+	BC017048 BC071703 TSC_hg19_v1_chr13_-_20767078 AK225966	29356	-	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	29409	-	NM_006783	67669	-	NM_021954|GJA3|2700|gap junction protein, alpha 3, 46kDa##AJ224901|ZMYM2|7750|zinc finger, MYM-type 2##BX647944|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190965|ZMYM2|7750|zinc finger, MYM-type 2##AK226118|ZMYM2|7750|zinc finger, MYM-type 2##AK289741|ZMYM2|7750|zinc finger, MYM-type 2##BC017048|GJB2|2706|gap junction protein, beta 2, 26kDa##BC071703|GJB2|2706|gap junction protein, beta 2, 26kDa##AK225966|GJB2|2706|gap junction protein, beta 2, 26kDa##AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa	0.270887	CTCF.p2:9:0.271
chr15	101629115	101629233	reg1003006.p1	14.162	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-169662	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-169700	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-209103	+	AB071402 TSC_hg19_v1_chr15_-_101791795	162562	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	162961	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	188489	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.166706	
chr10	73144112	73144214	reg1002187.p1	14.161	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-65117	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-65138	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-171783	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	12575	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	335429	-	AK074172 NM_001168390	353417	-	BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105	0.997239	CTCF.p2:-9:0.997
chr6	10801600	10801727	reg1004084.p1	14.161	+	AK311340 TSC_hg19_v1_chr6_+_10748043 NM_001127711 NM_030969 AK294018 BC013913 AK291883 AK294152 BC007080 BC001033 BC071660	-53623	+	NM_001165258 NM_016462 TSC_hg19_v1_chr6_+_10723398 AF151028 BC010086 AK310191 AK309591 AF164962 BC002496 AK223462	-78365	+	TSC_hg19_v1_chr6_+_10695204 BC010907 NM_017906 AB527917 DQ892798 DQ896045	-106477	+	AK314408 AB593146 AK097831 AK310329 TSC_hg19_v1_chr6_-_10838761 BC033002 NM_001242385 NM_001242957 NM_005906	37086	-	AF091149 BC069603 AF079550 BC117316 BC117318 NM_004752	80416	-	AK128130 NM_001040274	85400	+	AK311340|TMEM14B|81853|transmembrane protein 14B##NM_001127711|TMEM14B|81853|transmembrane protein 14B##NM_030969|TMEM14B|81853|transmembrane protein 14B##BC013913|TMEM14B|81853|transmembrane protein 14B##AK291883|TMEM14B|81853|transmembrane protein 14B##AK294152|TMEM14B|81853|transmembrane protein 14B##BC007080|TMEM14B|81853|transmembrane protein 14B##BC001033|TMEM14B|81853|transmembrane protein 14B##BC071660|TMEM14B|81853|transmembrane protein 14B##NM_001165258|TMEM14C|51522|transmembrane protein 14C##NM_016462|TMEM14C|51522|transmembrane protein 14C##AF151028|TMEM14C|51522|transmembrane protein 14C##BC010086|TMEM14C|51522|transmembrane protein 14C##AK310191|TMEM14C|51522|transmembrane protein 14C##AK309591|TMEM14C|51522|transmembrane protein 14C##AF164962|TMEM14C|51522|transmembrane protein 14C##BC002496|TMEM14C|51522|transmembrane protein 14C##AK223462|TMEM14C|51522|transmembrane protein 14C##BC010907|PAK1IP1|55003|PAK1 interacting protein 1##NM_017906|PAK1IP1|55003|PAK1 interacting protein 1##DQ892798|PAK1IP1|55003|PAK1 interacting protein 1##DQ896045|PAK1IP1|55003|PAK1 interacting protein 1##AK314408|MAK|4117|male germ cell-associated kinase##AB593146|MAK|4117|male germ cell-associated kinase##AK097831|MAK|4117|male germ cell-associated kinase##AK310329|MAK|4117|male germ cell-associated kinase##BC033002|MAK|4117|male germ cell-associated kinase##NM_001242385|MAK|4117|male germ cell-associated kinase##NM_001242957|MAK|4117|male germ cell-associated kinase##NM_005906|MAK|4117|male germ cell-associated kinase##AF091149|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC069603|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AF079550|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117316|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117318|GCM2|9247|glial cells missing homolog 2 (Drosophila)##NM_004752|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AK128130|SYCP2L|221711|synaptonemal complex protein 2-like##NM_001040274|SYCP2L|221711|synaptonemal complex protein 2-like	0.99955	CTCF.p2:-2:1.000
chr11	9883789	9883919	reg1003504.p1	14.160	+	AK098060 TSC_hg19_v1_chr11_+_9779882	-103992	+	TSC_hg19_v1_chr11_+_9685669 AB014540 BC000134 CU674300 AF210818 AK304104	-198148	+	BC000616 TSC_hg19_v1_chr11_+_9685651 AF134894	-198203	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	431912	-	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	442775	+	AK295046 NM_001172431	588013	+	AK098060|LOC283104|283104|uncharacterized LOC283104##AB014540|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000134|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF210818|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AK304104|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000616|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF134894|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3	0.999599	CTCF.p2:8:1.000
chr18	72020563	72020679	reg1002032.p1	14.160	+	CR749350 NM_001174123	-37512	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	-61442	-	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	-204827	+	TSC_hg19_v1_chr18_-_72124545 NM_001044369	103908	-	TSC_hg19_v1_chr18_+_72163567 NM_018235	142837	+	TSC_hg19_v1_chr18_+_72163611 AK001692 AK300904 AK298309 BC001375	142994	+	CR749350|C18orf63|644041|chromosome 18 open reading frame 63##NM_001174123|C18orf63|644041|chromosome 18 open reading frame 63##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##NM_001044369|FAM69C|125704|family with sequence similarity 69, member C##NM_018235|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK001692|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK300904|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK298309|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##BC001375|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)	0.632753	CTCF.p2:-11:0.633
chr19	35911363	35911509	reg1003680.p1	14.160	+	AK290710 NM_005304 BC035657	-61942	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	-68986	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	-91345	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	29181	+	AM392574 AM392667 AM392672 AM392738 AM392847 AM392851 AM393397 AM393477 AY359007 HQ258707 BC130501 NM_001244847 NM_207392	69952	-	AY622964 AY789707 AF086315 AL832080 NM_001035516	81369	-	AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule##AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2##AM392574|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392667|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392672|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392738|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392847|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392851|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393397|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393477|KRTDAP|388533|keratinocyte differentiation-associated protein##AY359007|KRTDAP|388533|keratinocyte differentiation-associated protein##HQ258707|KRTDAP|388533|keratinocyte differentiation-associated protein##BC130501|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_001244847|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_207392|KRTDAP|388533|keratinocyte differentiation-associated protein##AY622964|DMKN|93099|dermokine##AY789707|DMKN|93099|dermokine##AF086315|DMKN|93099|dermokine##AL832080|DMKN|93099|dermokine##NM_001035516|DMKN|93099|dermokine	0.182512	
chr1	165687286	165687401	reg1002942.p1	14.158	+	TSC_hg19_v1_chr1_-_165667837 BC151140 BC151141 NM_000696	-19476	-	AF172093 TSC_hg19_v1_chr1_-_165667800 BC011410 AK301767 AK302654 AK312751 BC070030 AK293520	-19565	-	TSC_hg19_v1_chr1_-_165667539 AK302191 AK302183 X75425 U50203	-19755	-	CU674038 AF274935 TSC_hg19_v1_chr1_-_165738097 BC000104 AY763589 AK316080 AY359027 AK316610	50702	-	TSC_hg19_v1_chr1_-_165738106 AF070626 AB020980 AK298614 NM_019026	50777	-	AK124964 BC009228 TSC_hg19_v1_chr1_+_165738255 BC071770	50878	+	BC151140|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##BC151141|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##NM_000696|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AF172093|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##BC011410|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK301767|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK302654|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK312751|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##BC070030|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK293520|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK302191|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK302183|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##X75425|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##U50203|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AF274935|TMCO1|54499|transmembrane and coiled-coil domains 1##BC000104|TMCO1|54499|transmembrane and coiled-coil domains 1##AY763589|TMCO1|54499|transmembrane and coiled-coil domains 1##AK316080|TMCO1|54499|transmembrane and coiled-coil domains 1##AY359027|TMCO1|54499|transmembrane and coiled-coil domains 1##AK316610|TMCO1|54499|transmembrane and coiled-coil domains 1##AF070626|TMCO1|54499|transmembrane and coiled-coil domains 1##AB020980|TMCO1|54499|transmembrane and coiled-coil domains 1##AK298614|TMCO1|54499|transmembrane and coiled-coil domains 1##NM_019026|TMCO1|54499|transmembrane and coiled-coil domains 1##AK124964|LOC100147773|100147773|uncharacterized LOC100147773##BC009228|LOC100147773|100147773|uncharacterized LOC100147773##BC071770|LOC100147773|100147773|uncharacterized LOC100147773	0.535639	CTCF.p2:-20:0.536
chr11	76309701	76309827	reg1002808.p2	14.158	+	TSC_hg19_v1_chr11_+_76156061 AK304043 BC033404 NM_020193 AK309621 BC021688 AK125114	-153661	+	TSC_hg19_v1_chr11_-_76155721 AK054718	-154039	-	TSC_hg19_v1_chr11_+_76092383 AK125821 BC040665 AK095089	-217341	+	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	71204	-	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	72045	-	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	184513	+	AK304043|C11orf30|56946|chromosome 11 open reading frame 30##BC033404|C11orf30|56946|chromosome 11 open reading frame 30##NM_020193|C11orf30|56946|chromosome 11 open reading frame 30##AK309621|C11orf30|56946|chromosome 11 open reading frame 30##BC021688|C11orf30|56946|chromosome 11 open reading frame 30##AK125114|C11orf30|56946|chromosome 11 open reading frame 30##AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)	0.0	
chr15	61209215	61209356	reg1003912.p1	14.158	+	U04899 U04898 NM_002943 NM_134260	-289600	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	-324606	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-438011	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	312139	-	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	312212	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	1143329	-	U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	0.997166	CTCF.p2:17:0.997
chr2	113017137	113017265	reg1003892.p1	14.158	+	BC032001 AK315329 AF334161 NM_032494	-4569	-	TSC_hg19_v1_chr2_+_112896040 BC126986 BC126987	-121102	+	TSC_hg19_v1_chr2_+_112895958 AK094759 NM_001128165 NM_153214 BC035784	-121212	+	TSC_hg19_v1_chr2_+_113033173 NM_198581	15960	+	TSC_hg19_v1_chr2_+_113033193 AK131416	16001	+	NM_005054 U64675 NM_001164463	173962	-	BC032001|ZC3H8|84524|zinc finger CCCH-type containing 8##AK315329|ZC3H8|84524|zinc finger CCCH-type containing 8##AF334161|ZC3H8|84524|zinc finger CCCH-type containing 8##NM_032494|ZC3H8|84524|zinc finger CCCH-type containing 8##BC126986|FBLN7|129804|fibulin 7##BC126987|FBLN7|129804|fibulin 7##AK094759|FBLN7|129804|fibulin 7##NM_001128165|FBLN7|129804|fibulin 7##NM_153214|FBLN7|129804|fibulin 7##BC035784|FBLN7|129804|fibulin 7##NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6##AK131416|ZC3H6|376940|zinc finger CCCH-type containing 6##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001164463|RGPD8|727851|RANBP2-like and GRIP domain containing 8	0.877471	CTCF.p2:-6:0.877
chr11	131543942	131544075	reg1003503.p1	14.157	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-303539	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-757620	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-757663	-	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	236616	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	237331	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	1269006	-	NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.327154	CTCF.p2:31:0.327
chr3	118347703	118347823	reg1003505.p1	14.156	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-2183390	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-2183432	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-3005344	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	405770	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	405920	-	AK097667 NM_152538 AK292387	517134	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.0	
chr12	121937833	121937932	reg1002577.p1	14.155	+	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	-32808	-	AF306709 TSC_hg19_v1_chr12_+_121837931 NM_025126 NM_194271 AK025439 AK225285 AK304366 BC007826 BC039029 BC046174 BC029038	-99918	+	AK025614 NM_001137559	-145871	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	80377	-	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	81032	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	126761	+	BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##AF306709|RNF34|80196|ring finger protein 34##NM_025126|RNF34|80196|ring finger protein 34##NM_194271|RNF34|80196|ring finger protein 34##AK025439|RNF34|80196|ring finger protein 34##AK225285|RNF34|80196|ring finger protein 34##BC007826|RNF34|80196|ring finger protein 34##BC039029|RNF34|80196|ring finger protein 34##BC046174|RNF34|80196|ring finger protein 34##AK025614|ANAPC5|51433|anaphase promoting complex subunit 5##NM_001137559|ANAPC5|51433|anaphase promoting complex subunit 5##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1	0.999864	CTCF.p2:-7:1.000
chr3	128964695	128964832	reg1002826.p2	14.155	+	AK054592 TSC_hg19_v1_chr3_-_128902766 BC000288 NM_001127192 NM_001127193 NM_001127194 NM_001127195 NM_001127196 NM_003418	-61945	-	TSC_hg19_v1_chr3_-_128902740 M28372 BC093058 AK314380 BC014911 DQ091187 DQ092366 DQ092367 AK292119 AK298154	-62051	-	TSC_hg19_v1_chr3_-_128890551 BT019613 CU674132 AB463471	-74187	-	TSC_hg19_v1_chr3_+_128968448 AK291693 NM_016128	3684	+	TSC_hg19_v1_chr3_+_128968474 AK001724 AK123939 AK309821 AF100756 BC066650 AB047846 AB527280	3748	+	TSC_hg19_v1_chr3_+_128997674 AF201934 NM_020187 BC088363 AK297501 AK309891 AK225264	32899	+	AK054592|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##BC000288|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##NM_001127192|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##NM_001127193|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##NM_001127194|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##NM_001127195|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##NM_001127196|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##NM_003418|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##M28372|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##BC093058|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##AK314380|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##BC014911|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##DQ091187|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##DQ092366|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##DQ092367|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##AK292119|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##AK298154|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##BT019613|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##AK291693|COPG|22820|coatomer protein complex, subunit gamma##NM_016128|COPG|22820|coatomer protein complex, subunit gamma##AK001724|COPG|22820|coatomer protein complex, subunit gamma##AK123939|COPG|22820|coatomer protein complex, subunit gamma##AK309821|COPG|22820|coatomer protein complex, subunit gamma##AF100756|COPG|22820|coatomer protein complex, subunit gamma##BC066650|COPG|22820|coatomer protein complex, subunit gamma##AB047846|COPG|22820|coatomer protein complex, subunit gamma##AF201934|C3orf37|56941|chromosome 3 open reading frame 37##NM_020187|C3orf37|56941|chromosome 3 open reading frame 37##BC088363|C3orf37|56941|chromosome 3 open reading frame 37##AK297501|C3orf37|56941|chromosome 3 open reading frame 37##AK309891|C3orf37|56941|chromosome 3 open reading frame 37##AK225264|C3orf37|56941|chromosome 3 open reading frame 37	1.008218	CTCF.p2:39:0.995
chr15	42349350	42349487	reg1003865.p1	14.154	+	NM_001206670	-6518	-	AK074621 AK292634 TSC_hg19_v1_chr15_-_42264753 AK024902 NM_139265	-84665	-	TSC_hg19_v1_chr15_-_42264741 CU690850 DQ892745 DQ895991 BC077716 AF454953 BC006287 AF307137 AF323924 BC051823	-84702	-	AB527201 AB090876 NM_178034	37286	-	BC111481 BC035335 AK122623 BC142682 BC146648 BC131531 AK304368 AK172836 NM_213600	99385	-	TSC_hg19_v1_chr15_-_42500479 AF280814 CU686671 AM392538 AM393769 AB018313	150989	-	NM_001206670|PLA2G4E|123745|phospholipase A2, group IVE##AK074621|EHD4|30844|EH-domain containing 4##AK292634|EHD4|30844|EH-domain containing 4##AK024902|EHD4|30844|EH-domain containing 4##NM_139265|EHD4|30844|EH-domain containing 4##DQ892745|EHD4|30844|EH-domain containing 4##DQ895991|EHD4|30844|EH-domain containing 4##BC077716|EHD4|30844|EH-domain containing 4##AF454953|EHD4|30844|EH-domain containing 4##BC006287|EHD4|30844|EH-domain containing 4##AF307137|EHD4|30844|EH-domain containing 4##AF323924|EHD4|30844|EH-domain containing 4##BC051823|EHD4|30844|EH-domain containing 4##AB090876|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##NM_178034|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##BC111481|PLA2G4F|255189|phospholipase A2, group IVF##BC035335|PLA2G4F|255189|phospholipase A2, group IVF##AK122623|PLA2G4F|255189|phospholipase A2, group IVF##BC142682|PLA2G4F|255189|phospholipase A2, group IVF##BC146648|PLA2G4F|255189|phospholipase A2, group IVF##BC131531|PLA2G4F|255189|phospholipase A2, group IVF##AK304368|PLA2G4F|255189|phospholipase A2, group IVF##AK172836|PLA2G4F|255189|phospholipase A2, group IVF##NM_213600|PLA2G4F|255189|phospholipase A2, group IVF##AF280814|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AM392538|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AM393769|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AB018313|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)	0.014227	
chr10	35507519	35507637	reg1003976.p1	14.153	+	AK289379 NM_182721 NM_182722 NM_182723 NM_182724 NM_182725 AK291566	-22748	+	D14826 NM_182717 NM_182718 NM_182719 NM_182720 AK290612 AF069065 U44836	-23493	+	NM_182769 NM_182770 AF417233 AY292864 BC090051 AK301906	-43047	+	AF429969 AK057280 NM_181698	28374	+	TSC_hg19_v1_chr10_+_35625400 AK314666	117878	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	118216	+	AK289379|CREM|1390|cAMP responsive element modulator##NM_182721|CREM|1390|cAMP responsive element modulator##NM_182722|CREM|1390|cAMP responsive element modulator##NM_182723|CREM|1390|cAMP responsive element modulator##NM_182724|CREM|1390|cAMP responsive element modulator##NM_182725|CREM|1390|cAMP responsive element modulator##AK291566|CREM|1390|cAMP responsive element modulator##D14826|CREM|1390|cAMP responsive element modulator##NM_182717|CREM|1390|cAMP responsive element modulator##NM_182718|CREM|1390|cAMP responsive element modulator##NM_182719|CREM|1390|cAMP responsive element modulator##NM_182720|CREM|1390|cAMP responsive element modulator##AK290612|CREM|1390|cAMP responsive element modulator##AF069065|CREM|1390|cAMP responsive element modulator##U44836|CREM|1390|cAMP responsive element modulator##NM_182769|CREM|1390|cAMP responsive element modulator##NM_182770|CREM|1390|cAMP responsive element modulator##AF417233|CREM|1390|cAMP responsive element modulator##AY292864|CREM|1390|cAMP responsive element modulator##BC090051|CREM|1390|cAMP responsive element modulator##AK301906|CREM|1390|cAMP responsive element modulator##AF429969|CCNY|219771|cyclin Y##AK057280|CCNY|219771|cyclin Y##NM_181698|CCNY|219771|cyclin Y##AK314666|CCNY|219771|cyclin Y##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y	0.951117	CTCF.p2:6:0.951
chr1	89823961	89824103	reg1003096.p1	14.152	+	AY358953 AK090479 AF328727 AF430643 TSC_hg19_v1_chr1_-_89738544 BC031639 AF430642 NM_001134486 NM_052942	-85518	-	AK304245 AB527149 AF288814 AK131094 AL832576 BC070055 BC017889 AK312417 BC008421 NM_052941	-159461	-	AK096141 NM_207398	-182310	-	NM_198460 AK131356	5412	+	NM_001134476 TSC_hg19_v1_chr1_+_89990414	166383	+	TSC_hg19_v1_chr1_+_89990454 BC060782 BC030607	166444	+	AY358953|GBP5|115362|guanylate binding protein 5##AK090479|GBP5|115362|guanylate binding protein 5##AF328727|GBP5|115362|guanylate binding protein 5##AF430643|GBP5|115362|guanylate binding protein 5##BC031639|GBP5|115362|guanylate binding protein 5##AF430642|GBP5|115362|guanylate binding protein 5##NM_001134486|GBP5|115362|guanylate binding protein 5##NM_052942|GBP5|115362|guanylate binding protein 5##AK304245|GBP4|115361|guanylate binding protein 4##AF288814|GBP4|115361|guanylate binding protein 4##AK131094|GBP4|115361|guanylate binding protein 4##AL832576|GBP4|115361|guanylate binding protein 4##BC070055|GBP4|115361|guanylate binding protein 4##BC017889|GBP4|115361|guanylate binding protein 4##AK312417|GBP4|115361|guanylate binding protein 4##BC008421|GBP4|115361|guanylate binding protein 4##NM_052941|GBP4|115361|guanylate binding protein 4##AK096141|GBP7|388646|guanylate binding protein 7##NM_207398|GBP7|388646|guanylate binding protein 7##NM_198460|GBP6|163351|guanylate binding protein family, member 6##AK131356|GBP6|163351|guanylate binding protein family, member 6##NM_001134476|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC060782|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC030607|LRRC8B|23507|leucine rich repeat containing 8 family, member B	0.871556	CTCF.p2:9:0.872
chr12	131617076	131617215	reg1004056.p1	14.151	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-178692	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-260434	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-260520	+	TSC_hg19_v1_chr12_+_132195623 BC142980	578468	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	578511	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	695821	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.999686	CTCF.p2:-9:1.000
chr4	11425786	11425891	reg1002841.p2	14.151	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-739437	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-966828	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-1307302	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	4694	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2060113	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2060137	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.94927	CTCF.p2:2:0.949
chr1	161011404	161011508	reg1003269.p1	14.150	+	AF111713 TSC_hg19_v1_chr1_-_161008767 NM_001113205 NM_001113206 NM_001113207 AK299487	-2698	-	AF191495 TSC_hg19_v1_chr1_-_161008713 BC001699 BC038219	-2742	-	TSC_hg19_v1_chr1_-_160990981 NM_016946	-20405	-	AK314876 BC035505 TSC_hg19_v1_chr1_-_161015745	4261	-	TSC_hg19_v1_chr1_-_161015769 NM_007122 NM_207005	4311	-	TSC_hg19_v1_chr1_-_161039466 AB463226 BC053688 BC025732	28011	-	NM_001113205|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##NM_001113206|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##NM_001113207|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##AK299487|F11R|50848|F11 receptor##BC001699|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##BC038219|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##NM_016946|F11R|50848|F11 receptor##AK314876|USF1|7391|upstream transcription factor 1##BC035505|USF1|7391|upstream transcription factor 1##NM_007122|USF1|7391|upstream transcription factor 1##NM_207005|USF1|7391|upstream transcription factor 1##BC053688|ARHGAP30|257106|Rho GTPase activating protein 30##BC025732|ARHGAP30|257106|Rho GTPase activating protein 30	0.068852	
chr2	198992486	198992604	reg1002863.p1	14.150	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	-323175	+	NM_197970 AK302817	-341559	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-342505	-	TSC_hg19_v1_chr2_-_200213802 AK025127	1221305	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	1328257	-	TSC_hg19_v1_chr2_-_200322238 AJ438951	1329705	-	AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2##AJ438951|SATB2|23314|SATB homeobox 2	0.966963	CTCF.p2:24:0.967
chr3	36742566	36742697	reg1004117.p1	14.149	+	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	-320579	+	BC017805 NM_198399 BC066651 BC036548	-1020172	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	-1021435	+	NM_033403	38720	-	TSC_hg19_v1_chr3_-_36986546 NM_014831	243939	-	AB385383 CU687938 TSC_hg19_v1_chr3_-_37034574	291940	-	AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain##BC017805|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_198399|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC066651|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC036548|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_033403|DCLK3|85443|doublecortin-like kinase 3##NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1	0.598224	CTCF.p2:15:0.598
chr3	127174524	127174629	reg1002253.p2	14.146	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	-262582	+	AB385178 NM_032242 X87832	-467136	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-751499	+	AB037108 NM_016372	124703	-	TSC_hg19_v1_chr3_-_127309338 BC017058	134768	-	BC050711 NM_001136053 AF289568 TSC_hg19_v1_chr3_-_127309565 NM_001142646	134957	-	AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC017058|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC050711|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001136053|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##AF289568|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001142646|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	0.377821	CTCF.p2:-5:0.378
chr10	4891968	4892110	reg1004574.p1	14.145	+	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	-23621	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-1064530	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-1064728	-	NM_001353 TSC_hg19_v1_chr10_+_5005576	113475	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	113584	+	D26124 TSC_hg19_v1_chr10_+_5005695	113651	+	BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##D26124|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	1.76062	CTCF.p2:-17:1.000	CTCF.p2:35:0.761
chr9	117053380	117053506	reg1003901.p1	14.145	+	TSC_hg19_v1_chr9_+_116930778 AB058773	-122611	+	AY149237 NM_032888	-135213	+	TSC_hg19_v1_chr9_+_116917816 BC035728	-135632	+	NM_000607 X02544 AK316207 AK312035 BC026238 BC007032 BC104818 BC104820 BC143313 BC143314 M13692 AB463987 BT019790 CU693168	31914	+	NM_000608 AK312226 BC015964 BC056239 AK303760 CR456930 CU677539	38683	+	BC042202 TSC_hg19_v1_chr9_-_117111294	57846	-	AB058773|COL27A1|85301|collagen, type XXVII, alpha 1##AY149237|COL27A1|85301|collagen, type XXVII, alpha 1##NM_032888|COL27A1|85301|collagen, type XXVII, alpha 1##BC035728|COL27A1|85301|collagen, type XXVII, alpha 1##NM_000607|ORM1|5004|orosomucoid 1##X02544|ORM1|5004|orosomucoid 1##AK316207|ORM1|5004|orosomucoid 1##AK312035|ORM1|5004|orosomucoid 1##BC026238|ORM1|5004|orosomucoid 1##BC007032|ORM1|5004|orosomucoid 1##BC104818|ORM1|5004|orosomucoid 1##BC104820|ORM1|5004|orosomucoid 1##BC143313|ORM1|5004|orosomucoid 1##BC143314|ORM1|5004|orosomucoid 1##M13692|ORM1|5004|orosomucoid 1##BT019790|ORM1|5004|orosomucoid 1##NM_000608|ORM2|5005|orosomucoid 2##AK312226|ORM2|5005|orosomucoid 2##BC015964|ORM2|5005|orosomucoid 2##BC056239|ORM2|5005|orosomucoid 2##AK303760|ORM2|5005|orosomucoid 2##CR456930|ORM2|5005|orosomucoid 2##BC042202|AKNA|80709|AT-hook transcription factor	0.992881	CTCF.p2:20:0.993
chr20	55664810	55664925	reg1003544.p1	14.144	+	TSC_hg19_v1_chr20_+_55204361 BC051829 NM_003222 AK314272 BC035664 U85658 X95693	-460437	+	BC014951 NM_001013646	-556584	+	AK131203 NM_080615	-563887	-	EU679366 AK094784 CU678997 DQ891494 DQ894685 EU176612 AB528364 CU678634 BC008584 M60316 AK312419 AK291186 TSC_hg19_v1_chr20_-_55841286 X51801	176328	-	TSC_hg19_v1_chr20_-_55841684 BC004248 NM_001719	176821	-	AF169385 NM_012444 NM_198265 BC033591 AF149310	239985	+	BC051829|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##NM_003222|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##AK314272|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##BC035664|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##U85658|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##X95693|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##BC014951|FAM209B|388799|family with sequence similarity 209, member B##NM_001013646|FAM209B|388799|family with sequence similarity 209, member B##AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##EU679366|BMP7|655|bone morphogenetic protein 7##AK094784|BMP7|655|bone morphogenetic protein 7##DQ891494|BMP7|655|bone morphogenetic protein 7##DQ894685|BMP7|655|bone morphogenetic protein 7##EU176612|BMP7|655|bone morphogenetic protein 7##BC008584|BMP7|655|bone morphogenetic protein 7##M60316|BMP7|655|bone morphogenetic protein 7##AK312419|BMP7|655|bone morphogenetic protein 7##AK291186|BMP7|655|bone morphogenetic protein 7##X51801|BMP7|655|bone morphogenetic protein 7##BC004248|BMP7|655|bone morphogenetic protein 7##NM_001719|BMP7|655|bone morphogenetic protein 7##AF169385|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_012444|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_198265|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##BC033591|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##AF149310|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	0.999913	CTCF.p2:-6:1.000
chr1	175121307	175121442	reg1002361.p1	14.143	+	AK127044 NM_022093	-84381	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-128803	-	TSC_hg19_v1_chr1_+_174969165 BC005865 AK294042 AF314752 BC022352 AL035305 AF057356 BC067823 BC078151 AF275803 AY423723	-152164	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	40656	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	591336	-	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	1054791	-	AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK294042|CACYBP|27101|calcyclin binding protein##AF314752|CACYBP|27101|calcyclin binding protein##BC022352|CACYBP|27101|calcyclin binding protein##AL035305|CACYBP|27101|calcyclin binding protein##AF057356|CACYBP|27101|calcyclin binding protein##BC067823|CACYBP|27101|calcyclin binding protein##BC078151|CACYBP|27101|calcyclin binding protein##AF275803|CACYBP|27101|calcyclin binding protein##AY423723|CACYBP|27101|calcyclin binding protein##D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2	0.996201	CTCF.p2:-28:0.996
chr3	155868404	155868519	reg1003905.p1	14.143	+	NM_003471 AK292999 L39833 U16953 U17968	-7599	+	NM_172160 L47665 AK292693 AK303287	-30110	+	TSC_hg19_v1_chr3_+_155588481 AK315832 U10860 DQ896621 EU176462	-279892	+	NM_172159 BC043166 AK127240	140349	+	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	404420	-	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	404482	-	NM_003471|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292999|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L39833|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U16953|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U17968|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_172160|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L47665|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292693|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK303287|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK315832|GMPS|8833|guanine monphosphate synthetase##U10860|GMPS|8833|guanine monphosphate synthetase##DQ896621|GMPS|8833|guanine monphosphate synthetase##EU176462|GMPS|8833|guanine monphosphate synthetase##NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	0.0	
chr12	70970925	70971060	reg1004415.p1	14.142	+	TSC_hg19_v1_chr12_+_70861858 BC031864	-109124	+	TSC_hg19_v1_chr12_+_70760230 NM_014505 AF160967 BC042446 BC050621 AF215891 AF207992	-210726	+	AK307479 NM_001199303 AK095789	-333481	+	BC101679 BC113463 BC143356 BC143360 NM_001206971 NM_001206972 NM_002837 X54131	32630	-	AB587339 TSC_hg19_v1_chr12_-_71031179 AK128562 BC051329 BX647238 CR749546 BX648245 AK126121 NM_001109754	60204	-	BC119777 BC122866 BC110900 TSC_hg19_v1_chr12_-_71148231	177157	-	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AK307479|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##NM_001199303|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK095789|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206971|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206972|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##AK128562|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC051329|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX647238|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##CR749546|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX648245|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##AK126121|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001109754|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	0.998312	CTCF.p2:2:0.998
chr10	44525741	44525863	reg1002843.p1	14.141	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-381496	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-381597	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-423905	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	354697	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	880916	+	AK056518 TSC_hg19_v1_chr10_-_45455156	929345	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.0	
chr21	32470989	32471148	reg1004375.p1	14.141	+	AB096964 NM_001099219	-60274	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	-217210	-	AJ457063 AB096962 NM_181606	-269080	-	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	460290	-	TSC_hg19_v1_chr21_+_33032005 NM_000454 AK312116 BC001034 X02317 EF151142 AB464254 AY049787 AY450286 BT006676 CR450355 CR541742 CU674512 EF143990	560939	+	AB032998 AK025748 AL117417 TSC_hg19_v1_chr21_-_33074136	603050	-	AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##NM_000454|SOD1|6647|superoxide dismutase 1, soluble##AK312116|SOD1|6647|superoxide dismutase 1, soluble##BC001034|SOD1|6647|superoxide dismutase 1, soluble##X02317|SOD1|6647|superoxide dismutase 1, soluble##EF151142|SOD1|6647|superoxide dismutase 1, soluble##AY049787|SOD1|6647|superoxide dismutase 1, soluble##AY450286|SOD1|6647|superoxide dismutase 1, soluble##BT006676|SOD1|6647|superoxide dismutase 1, soluble##CR450355|SOD1|6647|superoxide dismutase 1, soluble##CR541742|SOD1|6647|superoxide dismutase 1, soluble##EF143990|SOD1|6647|superoxide dismutase 1, soluble##AB032998|SCAF4|57466|SR-related CTD-associated factor 4##AK025748|SCAF4|57466|SR-related CTD-associated factor 4##AL117417|SCAF4|57466|SR-related CTD-associated factor 4	0.932033	CTCF.p2:-20:0.932
chr2	99029440	99029586	reg1004732.p1	14.139	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-66608	+	DQ426863 NM_001079878 NM_001298 DQ067460	-66880	+	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	-325867	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	31845	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	195429	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	195537	+	DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B##AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)	0.999667	CTCF.p2:-14:1.000
chr8	27449859	27449973	reg1003514.p1	14.137	+	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	-101258	+	AK314787 U62431 NM_000742	-113145	-	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-266839	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	22289	-	AB527877 TSC_hg19_v1_chr8_-_27472317 NM_001831	22396	-	BC060811 TSC_hg19_v1_chr8_+_27491395	41473	+	AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin##NM_001831|CLU|1191|clusterin##BC060811|SCARA3|51435|scavenger receptor class A, member 3	0.999773	CTCF.p2:0:1.000
chr3	50263608	50263747	reg1004635.p1	14.136	+	TSC_hg19_v1_chr3_+_50242705 NM_006841 AK299677 BX537382 AK293801 AK313461 BC042875 U49082 AF244548	-20971	+	DQ426874 NM_000172 NM_144499 X15088 BC095505 AF493908	-34587	+	BC042914 NM_004186 U33920	-70771	+	TSC_hg19_v1_chr3_+_50273632 BC012138	9926	+	AK055574 TSC_hg19_v1_chr3_+_50273635	9960	+	TSC_hg19_v1_chr3_+_50273646 NM_002070	9968	+	NM_006841|SLC38A3|10991|solute carrier family 38, member 3##AK299677|SLC38A3|10991|solute carrier family 38, member 3##BX537382|SLC38A3|10991|solute carrier family 38, member 3##AK293801|SLC38A3|10991|solute carrier family 38, member 3##AK313461|SLC38A3|10991|solute carrier family 38, member 3##BC042875|SLC38A3|10991|solute carrier family 38, member 3##U49082|SLC38A3|10991|solute carrier family 38, member 3##AF244548|SLC38A3|10991|solute carrier family 38, member 3##NM_000172|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##NM_144499|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##X15088|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##BC095505|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##AF493908|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##BC042914|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##NM_004186|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##U33920|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##BC012138|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AK055574|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##NM_002070|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	0.965475	CTCF.p2:5:0.965
chr15	72093605	72093722	reg1003126.p1	14.135	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	-254083	+	NM_024817 BC140868	-659853	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-685792	-	AF121129 NM_014249 NM_016346 AF148128	9249	+	AK097557 NM_001166340	312935	+	NM_001172109 NM_001172110	315555	+	AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172109|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172110|SENP8|123228|SUMO/sentrin specific peptidase family member 8	0.958224	CTCF.p2:16:0.958
chr3	164903628	164903751	reg1003031.p1	14.135	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	-107411	-	NM_001080440	-3689094	+	AF458592 BC037817 NM_001040100	-3813881	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	10816	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	651504	-	NM_000055 TSC_hg19_v1_chr3_-_165555283	651578	-	BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##NM_000055|BCHE|590|butyrylcholinesterase	0.929625	CTCF.p2:9:0.930
chr7	76239283	76239405	reg1003460.p1	14.134	+	TSC_hg19_v1_chr7_+_76178675 BC078169	-60669	+	TSC_hg19_v1_chr7_+_76178647 BC090058	-60712	+	NM_030570 NM_182684 AK290096 AY233462 BC004304 AK056760 CU678662	-99488	+	TSC_hg19_v1_chr7_-_76256148 BC017101	16859	-	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	17203	-	BC036053 NM_020879 BX649000 AK292491 HM370402	512602	+	BC078169|LOC100133091|100133091|uncharacterized LOC100133091##BC090058|LOC100133091|100133091|uncharacterized LOC100133091##NM_030570|UPK3B|80761|uroplakin 3B##NM_182684|UPK3B|80761|uroplakin 3B##AK290096|UPK3B|80761|uroplakin 3B##AY233462|UPK3B|80761|uroplakin 3B##BC004304|UPK3B|80761|uroplakin 3B##AK056760|UPK3B|80761|uroplakin 3B##BC017101|POMZP3|22932|POM121 and ZP3 fusion##BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146	0.170045	
chr8	72887573	72887708	reg1003595.p1	14.133	+	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-130932	-	AF060154 TSC_hg19_v1_chr8_-_72756646	-131012	-	TSC_hg19_v1_chr8_-_72756449 AF087036 AB463900 BT007169	-131201	-	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	100194	-	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	562003	+	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	1033472	+	AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##AF060154|MSC|9242|musculin##AF087036|MSC|9242|musculin##BT007169|MSC|9242|musculin##NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1	0.273641	CTCF.p2:2:0.274
chr14	59495414	59495557	reg1002598.p1	14.132	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-390739	+	AK302579 NM_001244193 AK310356 AK302718	-589059	+	NM_014749 BC066647	-600754	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	159919	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	436437	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	436571	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.893108	CTCF.p2:-3:0.893
chr4	184393513	184393648	reg1003404.p1	14.132	+	TSC_hg19_v1_chr4_+_184365846 AF246705 AK096180 BC022270 AK225848 EU446516 CU692522	-27711	+	TSC_hg19_v1_chr4_+_184365788 AK000043 NM_017632	-27794	+	NM_001185149	-150002	-	TSC_hg19_v1_chr4_-_184425612 BC038563	32058	-	TSC_hg19_v1_chr4_+_184426172 AK314000 NM_001564 BC030128 AB012853 AF053537 AB464592 AJ006851 CU688818	32667	+	TSC_hg19_v1_chr4_+_184427252 AK294310 AB196793	33711	+	AF246705|CDKN2AIP|55602|CDKN2A interacting protein##AK096180|CDKN2AIP|55602|CDKN2A interacting protein##BC022270|CDKN2AIP|55602|CDKN2A interacting protein##AK225848|CDKN2AIP|55602|CDKN2A interacting protein##EU446516|CDKN2AIP|55602|CDKN2A interacting protein##AK000043|CDKN2AIP|55602|CDKN2A interacting protein##NM_017632|CDKN2AIP|55602|CDKN2A interacting protein##NM_001185149|CLDN24|100132463|claudin 24##BC038563|LOC389247|389247|uncharacterized LOC389247##AK314000|ING2|3622|inhibitor of growth family, member 2##NM_001564|ING2|3622|inhibitor of growth family, member 2##BC030128|ING2|3622|inhibitor of growth family, member 2##AB012853|ING2|3622|inhibitor of growth family, member 2##AF053537|ING2|3622|inhibitor of growth family, member 2##AJ006851|ING2|3622|inhibitor of growth family, member 2##AK294310|ING2|3622|inhibitor of growth family, member 2##AB196793|ING2|3622|inhibitor of growth family, member 2	0.999931	CTCF.p2:-10:1.000
chr1	160054010	160054115	reg1003035.p2	14.130	+	TSC_hg19_v1_chr1_+_160051343 NM_004983 U52152 BC117516 BC117517 BC117518 BC117519	-2700	+	BC131627 BC034036 AK312383 TSC_hg19_v1_chr1_-_160040009 U52155 NM_002241	-14064	-	AB028127 TSC_hg19_v1_chr1_-_160001781 BC019865 AK074655 BC011395 NM_145167	-52308	-	AB590475 TSC_hg19_v1_chr1_-_160068277 AY157579 AF311906 AY044845	14235	-	TSC_hg19_v1_chr1_-_160068411 AF407274 AK055843 BC053881 NM_052868	14353	-	AK308115 NM_001206665 TSC_hg19_v1_chr1_-_160068754	14626	-	NM_004983|KCNJ9|3765|potassium inwardly-rectifying channel, subfamily J, member 9##U52152|KCNJ9|3765|potassium inwardly-rectifying channel, subfamily J, member 9##BC131627|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##BC034036|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##AK312383|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##U52155|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##NM_002241|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##AB028127|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC019865|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AK074655|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC011395|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##NM_145167|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AY157579|IGSF8|93185|immunoglobulin superfamily, member 8##AF311906|IGSF8|93185|immunoglobulin superfamily, member 8##AY044845|IGSF8|93185|immunoglobulin superfamily, member 8##AF407274|IGSF8|93185|immunoglobulin superfamily, member 8##AK055843|IGSF8|93185|immunoglobulin superfamily, member 8##BC053881|IGSF8|93185|immunoglobulin superfamily, member 8##NM_052868|IGSF8|93185|immunoglobulin superfamily, member 8##AK308115|IGSF8|93185|immunoglobulin superfamily, member 8##NM_001206665|IGSF8|93185|immunoglobulin superfamily, member 8	0.999588	CTCF.p2:-7:1.000
chr17	5152966	5153098	reg1004307.p1	14.130	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	-14931	-	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-57652	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-57859	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	32634	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	169893	-	AY775314 AY775315 AY775316 AY775317 AY775318 AY775319 AY775320 AY775321 AY775323 NM_001033002 NM_001160243 NM_001160244 NM_001160246 NM_001160266 NM_001160267	169928	+	DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa##AY775314|RPAIN|84268|RPA interacting protein##AY775315|RPAIN|84268|RPA interacting protein##AY775316|RPAIN|84268|RPA interacting protein##AY775317|RPAIN|84268|RPA interacting protein##AY775318|RPAIN|84268|RPA interacting protein##AY775319|RPAIN|84268|RPA interacting protein##AY775320|RPAIN|84268|RPA interacting protein##AY775321|RPAIN|84268|RPA interacting protein##AY775323|RPAIN|84268|RPA interacting protein##NM_001033002|RPAIN|84268|RPA interacting protein##NM_001160243|RPAIN|84268|RPA interacting protein##NM_001160244|RPAIN|84268|RPA interacting protein##NM_001160246|RPAIN|84268|RPA interacting protein##NM_001160266|RPAIN|84268|RPA interacting protein##NM_001160267|RPAIN|84268|RPA interacting protein	0.999366	CTCF.p2:1:0.999
chr5	158122656	158122810	reg1004275.p1	14.129	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-836643	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-938353	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-951993	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	403724	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	404009	-	AK304228 NM_001199382	511915	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.997027	CTCF.p2:-18:0.997
chr9	132998540	132998672	reg1002878.p2	14.129	+	NM_001128826	-35735	+	TSC_hg19_v1_chr9_+_132934685 BC004856 NM_014286 AF134479 AF186409 X84048 AB463656	-63793	+	AK024651 TSC_hg19_v1_chr9_+_132897386	-101242	+	NM_000050 NM_054012	321487	+	TSC_hg19_v1_chr9_+_133320348 BC009243 AK304625 AK293114 AK315093 AK027126 BC021676 BC013224	321696	+	TSC_hg19_v1_chr9_-_133454851 AK056037	456243	-	NM_001128826|NCS1|23413|neuronal calcium sensor 1##BC004856|NCS1|23413|neuronal calcium sensor 1##NM_014286|NCS1|23413|neuronal calcium sensor 1##AF134479|NCS1|23413|neuronal calcium sensor 1##AF186409|NCS1|23413|neuronal calcium sensor 1##X84048|NCS1|23413|neuronal calcium sensor 1##AK024651|GPR107|57720|G protein-coupled receptor 107##NM_000050|ASS1|445|argininosuccinate synthase 1##NM_054012|ASS1|445|argininosuccinate synthase 1##BC009243|ASS1|445|argininosuccinate synthase 1##AK304625|ASS1|445|argininosuccinate synthase 1##AK293114|ASS1|445|argininosuccinate synthase 1##AK315093|ASS1|445|argininosuccinate synthase 1##AK027126|ASS1|445|argininosuccinate synthase 1##BC021676|ASS1|445|argininosuccinate synthase 1##BC013224|ASS1|445|argininosuccinate synthase 1##AK056037|LOC100272217|100272217|uncharacterized LOC100272217	0.996208	CTCF.p2:0:0.996
chr11	74413553	74413673	reg1004556.p1	14.128	+	AK302677 AK316370 D26018 NM_006591 TSC_hg19_v1_chr11_+_74303654 BC092454 AK316301 BC108908 BC108909 BC032636 BC058840 BC041703 AB383722	-109950	+	TSC_hg19_v1_chr11_-_74204756 NM_001144869	-208863	-	CR936625 DQ192291 NM_005472	-235017	-	NM_015424 AK304519 AY358522 AY279090 AY279091	28592	-	BC142623 TSC_hg19_v1_chr11_-_74442472	28840	-	TSC_hg19_v1_chr11_+_74459915 AB082522 NM_001098638	46295	+	AK302677|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316370|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##D26018|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_006591|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC092454|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316301|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108908|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108909|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC032636|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC058840|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC041703|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_001144869|LIPT2|387787|lipoyl(octanoyl) transferase 2 (putative)##CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_015424|CHRDL2|25884|chordin-like 2##AK304519|CHRDL2|25884|chordin-like 2##AY358522|CHRDL2|25884|chordin-like 2##AY279090|CHRDL2|25884|chordin-like 2##AY279091|CHRDL2|25884|chordin-like 2##BC142623|CHRDL2|25884|chordin-like 2##AB082522|RNF169|254225|ring finger protein 169##NM_001098638|RNF169|254225|ring finger protein 169	0.102757	
chr17	27438973	27439089	reg1004336.p1	14.128	+	AK054958 NM_004740	-36405	-	TSC_hg19_v1_chr17_-_27401793 BC131561 BC047669	-37173	-	BC058075 TSC_hg19_v1_chr17_-_27401707	-37382	-	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	28380	-	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	68319	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	134846	+	AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC131561|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC047669|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC058075|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1	0.896903	CTCF.p2:5:0.897
chr6	97507446	97507593	reg1004150.p1	14.128	+	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	-134896	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-161755	-	TSC_hg19_v1_chr6_-_97345751 BC018802 AF161474	-161767	-	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	223571	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	1775061	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	1775153	+	NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC018802|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF161474|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2	0.996844	CTCF.p2:6:0.997
chr3	150439212	150439342	reg1002931.p1	14.127	+	AK093375 AX748085 BC036239 BC029577 NM_152394	-17548	-	NM_016275 TSC_hg19_v1_chr3_+_150321107 BC006012 AK300315 BC026350 AK075006 AY358095 AF195141 BC008411 BC009611 AY358096 AF131856 BC071699 BC036738 BC009556 CU679417 CU693228 CU691400	-118122	+	BC039424 AK125413 TSC_hg19_v1_chr3_-_150321004	-118301	-	TSC_hg19_v1_chr3_-_150480902 AK223565	41622	-	TSC_hg19_v1_chr3_-_150480936 BC013082	41653	-	TSC_hg19_v1_chr3_-_150481278 U76248 NM_005067	41845	-	AK093375|FAM194A|131831|family with sequence similarity 194, member A##BC036239|FAM194A|131831|family with sequence similarity 194, member A##BC029577|FAM194A|131831|family with sequence similarity 194, member A##NM_152394|FAM194A|131831|family with sequence similarity 194, member A##NM_016275|SELT|51714|selenoprotein T##BC006012|SELT|51714|selenoprotein T##AK300315|SELT|51714|selenoprotein T##BC026350|SELT|51714|selenoprotein T##AK075006|SELT|51714|selenoprotein T##AY358095|SELT|51714|selenoprotein T##AF195141|SELT|51714|selenoprotein T##BC008411|SELT|51714|selenoprotein T##BC009611|SELT|51714|selenoprotein T##AY358096|SELT|51714|selenoprotein T##AF131856|SELT|51714|selenoprotein T##BC071699|SELT|51714|selenoprotein T##BC036738|SELT|51714|selenoprotein T##BC009556|SELT|51714|selenoprotein T##AK125413|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AK223565|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##BC013082|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##U76248|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##NM_005067|SIAH2|6478|seven in absentia homolog 2 (Drosophila)	0.934169	CTCF.p2:-2:0.934
chr6	46057986	46058117	reg1003969.p1	14.127	+	AY032602 AK097048 NM_001114086	-10020	-	DQ892643 DQ895881 CU690236 AF176920 AK314416 AK075163 TSC_hg19_v1_chr6_-_45983598 AK075144 AF216941 AK222544 BC035968 DQ679794 AK223130 NM_016929	-74574	-	TSC_hg19_v1_chr6_+_45390379 L40992	-667639	+	NM_014936 TSC_hg19_v1_chr6_+_46097726 BC018054	39663	+	TSC_hg19_v1_chr6_+_46097818 AK291276 AB020686	39813	+	AK312790 TSC_hg19_v1_chr6_-_46138695 BC027615 AY358514 AK292842 AK295192 BX647968 NM_021572	80615	-	AY032602|CLIC5|53405|chloride intracellular channel 5##AK097048|CLIC5|53405|chloride intracellular channel 5##NM_001114086|CLIC5|53405|chloride intracellular channel 5##DQ892643|CLIC5|53405|chloride intracellular channel 5##DQ895881|CLIC5|53405|chloride intracellular channel 5##AF176920|CLIC5|53405|chloride intracellular channel 5##AK314416|CLIC5|53405|chloride intracellular channel 5##AK075163|CLIC5|53405|chloride intracellular channel 5##AK075144|CLIC5|53405|chloride intracellular channel 5##AF216941|CLIC5|53405|chloride intracellular channel 5##AK222544|CLIC5|53405|chloride intracellular channel 5##BC035968|CLIC5|53405|chloride intracellular channel 5##DQ679794|CLIC5|53405|chloride intracellular channel 5##AK223130|CLIC5|53405|chloride intracellular channel 5##NM_016929|CLIC5|53405|chloride intracellular channel 5##L40992|RUNX2|860|runt-related transcription factor 2##NM_014936|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##BC018054|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##AK291276|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##AB020686|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##AK312790|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##BC027615|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##AY358514|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##AK292842|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##AK295192|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##BX647968|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##NM_021572|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)	0.997336	CTCF.p2:-14:0.997
chr21	35724168	35724297	reg1004089.p1	14.126	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	-278303	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	-278391	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-436140	-	AF302095 DQ192290 NM_172201 BC112087 BC093892	12114	+	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	23593	+	AY789480 NM_001127670 EU008570	103840	-	AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1	0.0	
chr9	86552930	86553084	reg1004017.p1	14.124	+	TSC_hg19_v1_chr9_-_86536400 AK297689 BC140788 AY237536 AY237537 AY237538 NM_017576	-16618	-	AB033131 AB033132 BC014476 NM_001135953 NM_025211	-120359	-	AK074535 TSC_hg19_v1_chr9_-_86323127 NM_013438 NM_053067	-229865	-	BC137461 BC137462 TSC_hg19_v1_chr9_-_86571611	18568	-	BC004407 TSC_hg19_v1_chr9_-_86571631	18632	-	TSC_hg19_v1_chr9_-_86571658 NM_032307	18652	-	AK297689|KIF27|55582|kinesin family member 27##BC140788|KIF27|55582|kinesin family member 27##AY237536|KIF27|55582|kinesin family member 27##AY237537|KIF27|55582|kinesin family member 27##AY237538|KIF27|55582|kinesin family member 27##NM_017576|KIF27|55582|kinesin family member 27##AB033131|GKAP1|80318|G kinase anchoring protein 1##AB033132|GKAP1|80318|G kinase anchoring protein 1##BC014476|GKAP1|80318|G kinase anchoring protein 1##NM_001135953|GKAP1|80318|G kinase anchoring protein 1##NM_025211|GKAP1|80318|G kinase anchoring protein 1##AK074535|UBQLN1|29979|ubiquilin 1##NM_013438|UBQLN1|29979|ubiquilin 1##NM_053067|UBQLN1|29979|ubiquilin 1##BC137461|C9orf64|84267|chromosome 9 open reading frame 64##BC137462|C9orf64|84267|chromosome 9 open reading frame 64##BC004407|C9orf64|84267|chromosome 9 open reading frame 64##NM_032307|C9orf64|84267|chromosome 9 open reading frame 64	0.999667	CTCF.p2:-25:1.000
chr11	77939560	77939686	reg1003179.p2	14.123	+	AK056231 NM_020798 AK301048 AK307875 TSC_hg19_v1_chr11_+_77899953	-39698	+	TSC_hg19_v1_chr11_-_77899673 AK300320 BC036058 NM_001029859 AK095233	-39967	-	TSC_hg19_v1_chr11_+_77850827 AK124949	-88763	+	AB011143 BC152459 NM_012296	113302	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	189183	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	189253	-	AK056231|USP35|57558|ubiquitin specific peptidase 35##NM_020798|USP35|57558|ubiquitin specific peptidase 35##AK301048|USP35|57558|ubiquitin specific peptidase 35##AK307875|USP35|57558|ubiquitin specific peptidase 35##AK300320|KCTD21|283219|potassium channel tetramerisation domain containing 21##BC036058|KCTD21|283219|potassium channel tetramerisation domain containing 21##NM_001029859|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK095233|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK124949|LOC100289388|100289388|uncharacterized LOC100289388##AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##NM_080491|GAB2|9846|GRB2-associated binding protein 2	0.9882	CTCF.p2:-6:0.988
chr13	59965894	59966024	reg1004539.p1	14.122	+	TSC_hg19_v1_chr13_+_58207858 AK307545	-1758063	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	-1760012	+	NM_001040429	-1760171	+	BC041395 TSC_hg19_v1_chr13_-_60325215	359185	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	621361	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	772022	-	AK307545|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##NM_001040429|PCDH17|27253|protocadherin 17##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	0.996618	CTCF.p2:-12:0.997
chr4	154006449	154006572	reg1003885.p1	14.119	+	NM_033393 AB051514	-142320	+	TSC_hg19_v1_chr4_+_153701117 AK290472 U52521 BC103759 BC105114 BC105116 BC143675 BC143676 AK096509	-305383	+	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	-305489	+	BC011052 NM_001130067	67759	+	TSC_hg19_v1_chr4_+_154125594 AK308731 NM_015271 AB011089 AF220018	119095	+	TSC_hg19_v1_chr4_+_154178530 BC025417	172029	+	NM_033393|FHDC1|85462|FH2 domain containing 1##AB051514|FHDC1|85462|FH2 domain containing 1##AK290472|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##U52521|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC103759|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105114|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105116|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143675|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143676|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK096509|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC011052|TRIM2|23321|tripartite motif containing 2##NM_001130067|TRIM2|23321|tripartite motif containing 2##AK308731|TRIM2|23321|tripartite motif containing 2##NM_015271|TRIM2|23321|tripartite motif containing 2##AB011089|TRIM2|23321|tripartite motif containing 2##AF220018|TRIM2|23321|tripartite motif containing 2##BC025417|TRIM2|23321|tripartite motif containing 2	0.996325	CTCF.p2:-7:0.996
chr5	135280788	135280916	reg1004928.p1	14.119	+	TSC_hg19_v1_chr5_+_135266044 NM_012159 BC044938	-14812	+	CU688130 BC066283 BC066284 BC066285 BC066286 BC066287 M30134 NM_000590 S63356 X17543	-49343	-	AK126812 NM_145282 BC025747	-110463	+	AB590696 BC093670 BC101579 AK314092 D63521 NM_002302	9769	-	NM_000358 TSC_hg19_v1_chr5_+_135364679 AK094581 AK094055 AK222833 AK298603 AK093916 AK303643 BC026352 BC000097 BC004972 M77349	83792	+	TSC_hg19_v1_chr5_+_135364731 AB590111 DQ892178 EU176690 CU678832 BT009820	83882	+	NM_012159|FBXL21|26223|F-box and leucine-rich repeat protein 21 (gene/pseudogene)##BC044938|FBXL21|26223|F-box and leucine-rich repeat protein 21 (gene/pseudogene)##BC066283|IL9|3578|interleukin 9##BC066284|IL9|3578|interleukin 9##BC066285|IL9|3578|interleukin 9##BC066286|IL9|3578|interleukin 9##BC066287|IL9|3578|interleukin 9##M30134|IL9|3578|interleukin 9##NM_000590|IL9|3578|interleukin 9##S63356|IL9|3578|interleukin 9##X17543|IL9|3578|interleukin 9##AK126812|SLC25A48|153328|solute carrier family 25, member 48##NM_145282|SLC25A48|153328|solute carrier family 25, member 48##BC025747|SLC25A48|153328|solute carrier family 25, member 48##BC093670|LECT2|3950|leukocyte cell-derived chemotaxin 2##BC101579|LECT2|3950|leukocyte cell-derived chemotaxin 2##AK314092|LECT2|3950|leukocyte cell-derived chemotaxin 2##D63521|LECT2|3950|leukocyte cell-derived chemotaxin 2##NM_002302|LECT2|3950|leukocyte cell-derived chemotaxin 2##NM_000358|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK094581|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK094055|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK222833|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK298603|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK093916|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK303643|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC026352|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC000097|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC004972|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##M77349|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##DQ892178|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##EU176690|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BT009820|TGFBI|7045|transforming growth factor, beta-induced, 68kDa	0.521871	CTCF.p2:-5:0.522
chr7	101331713	101331853	reg1004277.p1	14.118	+	BC002778 NM_138403	-59208	-	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	-325566	+	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	-366745	-	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	127426	+	M74099 NM_181552	129098	+	TSC_hg19_v1_chr7_+_101928390 NM_020979	596614	+	BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_020979|SH2B2|10603|SH2B adaptor protein 2	1.026944	CTCF.p2:-4:0.971
chr8	98608168	98608306	reg1002918.p1	14.118	+	TSC_hg19_v1_chr8_-_98290193 AK091445 AX746987	-318018	-	TSC_hg19_v1_chr8_-_98290171 BC045630 NM_033512	-318064	-	CU692280 AB384285 AB051537 TSC_hg19_v1_chr8_-_98290135	-318129	-	TSC_hg19_v1_chr8_+_98656416 BC045642 NM_178812 BC001815	48140	+	TSC_hg19_v1_chr8_+_98656437 BC014977 AF501310	48222	+	BC022825 TSC_hg19_v1_chr8_+_98656510 BC009324 AF411226 AY082966 AY974040	48376	+	AK091445|TSPYL5|85453|TSPY-like 5##BC045630|TSPYL5|85453|TSPY-like 5##NM_033512|TSPYL5|85453|TSPY-like 5##AB051537|TSPYL5|85453|TSPY-like 5##BC045642|MTDH|92140|metadherin##NM_178812|MTDH|92140|metadherin##BC001815|MTDH|92140|metadherin##BC014977|MTDH|92140|metadherin##AF501310|MTDH|92140|metadherin##BC022825|MTDH|92140|metadherin##BC009324|MTDH|92140|metadherin##AF411226|MTDH|92140|metadherin##AY082966|MTDH|92140|metadherin##AY974040|MTDH|92140|metadherin	0.999412	CTCF.p2:-16:0.999
chr10	6056242	6056373	reg1003127.p1	14.117	+	AF035279 BC107777 BC065506 NM_001243539	-36293	-	CR542023 HQ401283 AB590464 BC121140 AK304211 BC074726 BC121141 U31628 NM_002189 NM_172200	-36794	-	AF380349 NM_032807	-119959	+	AB528862 AK223313 K03122 X01057 AK313847 NM_000417	47915	-	TSC_hg19_v1_chr10_+_6130954 NM_032905	74642	+	TSC_hg19_v1_chr10_+_6131024 AF542550 AK314952	74692	+	AF035279|IL15RA|3601|interleukin 15 receptor, alpha##BC107777|IL15RA|3601|interleukin 15 receptor, alpha##BC065506|IL15RA|3601|interleukin 15 receptor, alpha##NM_001243539|IL15RA|3601|interleukin 15 receptor, alpha##CR542023|IL15RA|3601|interleukin 15 receptor, alpha##HQ401283|IL15RA|3601|interleukin 15 receptor, alpha##BC121140|IL15RA|3601|interleukin 15 receptor, alpha##AK304211|IL15RA|3601|interleukin 15 receptor, alpha##BC074726|IL15RA|3601|interleukin 15 receptor, alpha##BC121141|IL15RA|3601|interleukin 15 receptor, alpha##U31628|IL15RA|3601|interleukin 15 receptor, alpha##NM_002189|IL15RA|3601|interleukin 15 receptor, alpha##NM_172200|IL15RA|3601|interleukin 15 receptor, alpha##AF380349|FBXO18|84893|F-box protein, helicase, 18##NM_032807|FBXO18|84893|F-box protein, helicase, 18##AK223313|IL2RA|3559|interleukin 2 receptor, alpha##K03122|IL2RA|3559|interleukin 2 receptor, alpha##X01057|IL2RA|3559|interleukin 2 receptor, alpha##AK313847|IL2RA|3559|interleukin 2 receptor, alpha##NM_000417|IL2RA|3559|interleukin 2 receptor, alpha##NM_032905|RBM17|84991|RNA binding motif protein 17##AF542550|RBM17|84991|RNA binding motif protein 17##AK314952|RBM17|84991|RNA binding motif protein 17	0.999767	CTCF.p2:-2:1.000
chr12	12487435	12487570	reg1004362.p1	14.117	+	BC117136 BC126405 BC143725 AF074264 NM_002336 TSC_hg19_v1_chr12_-_12419947	-67660	-	AK074543 TSC_hg19_v1_chr12_-_12291395	-196118	-	AF281254 AF281255 NM_030766 NM_138722	-263101	+	AY358563 TSC_hg19_v1_chr12_-_12503210 AK023622 NM_018050 AK001160 BC032998	15670	-	TSC_hg19_v1_chr12_+_12510051 NM_058169 AK075028 BC013668 AY037865 AY037866 DQ891778 DQ894962 CU680646	22663	+	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	227898	-	BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6##BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6##BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6##AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6##NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AY358563|MANSC1|54682|MANSC domain containing 1##AK023622|MANSC1|54682|MANSC domain containing 1##NM_018050|MANSC1|54682|MANSC domain containing 1##AK001160|MANSC1|54682|MANSC domain containing 1##BC032998|MANSC1|54682|MANSC domain containing 1##NM_058169|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AK075028|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##BC013668|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037865|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037866|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ891778|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ894962|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16	0.994381	CTCF.p2:10:0.994
chr13	99305771	99305908	reg1004435.p1	14.117	+	TSC_hg19_v1_chr13_-_99229363 BC035578 BC065378 NM_001032296	-76528	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	-76717	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	-76785	-	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	99066	-	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	324451	-	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	432852	-	BC035578|STK24|8428|serine/threonine kinase 24##BC065378|STK24|8428|serine/threonine kinase 24##NM_001032296|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9	0.998558	CTCF.p2:6:0.999
chr9	127536802	127536926	reg1003808.p1	14.117	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	-3354	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	-116160	+	TSC_hg19_v1_chr9_-_127269711 BC032501 NM_004959	-267160	-	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	2636	+	BC150645 BC171828 BC171830 BC171837 BC127949 TSC_hg19_v1_chr9_+_127615749 NM_001045476	78860	+	TSC_hg19_v1_chr9_-_127624226 BC071915 U12465 BC000348 AK291072 BC010919 D28448 NM_007209	87353	-	HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A##BC150645|WDR38|401551|WD repeat domain 38##BC171828|WDR38|401551|WD repeat domain 38##BC171830|WDR38|401551|WD repeat domain 38##BC171837|WDR38|401551|WD repeat domain 38##BC127949|WDR38|401551|WD repeat domain 38##NM_001045476|WDR38|401551|WD repeat domain 38##BC071915|RPL35|11224|ribosomal protein L35##U12465|RPL35|11224|ribosomal protein L35##BC000348|RPL35|11224|ribosomal protein L35##AK291072|RPL35|11224|ribosomal protein L35##BC010919|RPL35|11224|ribosomal protein L35##D28448|RPL35|11224|ribosomal protein L35##NM_007209|RPL35|11224|ribosomal protein L35	1.015026	CTCF.p2:-10:0.998
chr20	52532398	52532564	reg1003157.p4	14.116	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-321682	-	AF041259 NM_006526	-332846	-	AK302570 NM_001193421	-730660	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	154581	-	AK315220 NM_003657	154822	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	258039	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.857399	CTCF.p2:-5:0.857
chr4	162241653	162241783	reg1003008.p1	14.116	+	AK294459 NM_014247	-2052721	+	AK058100 NM_152543	-2285386	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-2551433	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	843433	-	TSC_hg19_v1_chr4_-_164088002 AK097352	1846274	-	TSC_hg19_v1_chr4_-_164088043 AK308601	1846319	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	1.070306	CTCF.p2:9:0.993
chr5	127549086	127549234	reg1004657.p1	14.116	+	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	-129687	+	AK090949 AX746698 TSC_hg19_v1_chr5_-_127419417	-129801	-	TSC_hg19_v1_chr5_-_127418765 AF088062 BX648677 BC036629	-130397	-	TSC_hg19_v1_chr5_-_127873553 AK300440	324357	-	NM_001999 TSC_hg19_v1_chr5_-_127873939 AF193046	324681	-	TSC_hg19_v1_chr5_+_128300789 BC041945	751643	+	AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##AK090949|FLJ33630|644873|uncharacterized LOC644873##AF088062|FLJ33630|644873|uncharacterized LOC644873##BX648677|FLJ33630|644873|uncharacterized LOC644873##BC036629|FLJ33630|644873|uncharacterized LOC644873##AK300440|FBN2|2201|fibrillin 2##NM_001999|FBN2|2201|fibrillin 2##AF193046|FBN2|2201|fibrillin 2##BC041945|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6	0.519682	CTCF.p2:-17:0.520
chr16	11808561	11808681	reg1003908.p1	14.115	+	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	-46323	+	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	-127832	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	-128434	-	TSC_hg19_v1_chr16_-_11836686 AK297094 BX648407 AK027646 NM_015914 BC002856 BC018635	28035	-	BC046363 BC036857 TSC_hg19_v1_chr16_-_11891096 AK091803 AX747194	82430	-	TSC_hg19_v1_chr16_-_11891103 NM_014153	82494	-	NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##AK297094|TXNDC11|51061|thioredoxin domain containing 11##BX648407|TXNDC11|51061|thioredoxin domain containing 11##AK027646|TXNDC11|51061|thioredoxin domain containing 11##NM_015914|TXNDC11|51061|thioredoxin domain containing 11##BC002856|TXNDC11|51061|thioredoxin domain containing 11##BC018635|TXNDC11|51061|thioredoxin domain containing 11##BC046363|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC036857|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK091803|ZC3H7A|29066|zinc finger CCCH-type containing 7A##NM_014153|ZC3H7A|29066|zinc finger CCCH-type containing 7A	0.541467	CTCF.p2:3:0.541
chr17	74394206	74394334	reg1004363.p1	14.114	+	TSC_hg19_v1_chr17_+_74381419 AF266756	-12829	+	CU676993 CU688902 NM_001142602 TSC_hg19_v1_chr17_+_74381358 AK292614 AK023393	-12975	+	TSC_hg19_v1_chr17_+_74380953 AK292294	-13316	+	BC007822 TSC_hg19_v1_chr17_-_74449235	54973	-	TSC_hg19_v1_chr17_-_74449273 AB051521 NM_022066	55018	-	BC092430 NM_001166579	55162	+	AF266756|SPHK1|8877|sphingosine kinase 1##NM_001142602|SPHK1|8877|sphingosine kinase 1##AK292614|SPHK1|8877|sphingosine kinase 1##AK023393|SPHK1|8877|sphingosine kinase 1##AK292294|SPHK1|8877|sphingosine kinase 1##BC007822|UBE2O|63893|ubiquitin-conjugating enzyme E2O##AB051521|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_022066|UBE2O|63893|ubiquitin-conjugating enzyme E2O##BC092430|AANAT|15|aralkylamine N-acetyltransferase##NM_001166579|AANAT|15|aralkylamine N-acetyltransferase	0.994947	CTCF.p2:-9:0.812
chr1	9202413	9202547	reg1004160.p1	14.113	+	DQ892804 DQ896051 TSC_hg19_v1_chr1_-_9189169 AK022194 AK292888 AK304154 AY768808 NM_024980 BC094733 BC018691	-13259	-	TSC_hg19_v1_chr1_-_9129695 M55531 AK290398 AK294368 NM_001135585 NM_003039	-72704	-	TSC_hg19_v1_chr1_-_9129644 AK289849 BC001692 BC001820 AK295785 BC035878	-72839	-	TSC_hg19_v1_chr1_+_9294832 BC081559	92335	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	92437	+	CR749282 TSC_hg19_v1_chr1_+_9299950	97458	+	DQ892804|GPR157|80045|G protein-coupled receptor 157##DQ896051|GPR157|80045|G protein-coupled receptor 157##AK022194|GPR157|80045|G protein-coupled receptor 157##AK292888|GPR157|80045|G protein-coupled receptor 157##AK304154|GPR157|80045|G protein-coupled receptor 157##AY768808|GPR157|80045|G protein-coupled receptor 157##NM_024980|GPR157|80045|G protein-coupled receptor 157##BC018691|GPR157|80045|G protein-coupled receptor 157##M55531|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK290398|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK294368|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_001135585|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_003039|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK289849|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001692|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001820|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK295785|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC035878|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##CR749282|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	0.977907	CTCF.p2:7:0.978
chr4	138741141	138741264	reg1004085.p1	14.113	+	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-287560	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-287610	-	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-3618284	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	422162	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	1195791	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	1264201	-	AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.184413	
chr3	141170985	141171111	reg1003082.p2	14.112	+	AK311479 TSC_hg19_v1_chr3_+_141105293	-65760	+	TSC_hg19_v1_chr3_+_141087345 AK311501	-83691	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	-127992	+	TSC_hg19_v1_chr3_+_141205882 AK292016 AK301015 AF115573 D78155 D82880 NM_006506	34823	+	TSC_hg19_v1_chr3_+_141457045 NM_001201370 NM_014245 NM_183237	286021	+	TSC_hg19_v1_chr3_+_141457129 AK311982	286072	+	AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK292016|RASA2|5922|RAS p21 protein activator 2##AK301015|RASA2|5922|RAS p21 protein activator 2##AF115573|RASA2|5922|RAS p21 protein activator 2##D78155|RASA2|5922|RAS p21 protein activator 2##D82880|RASA2|5922|RAS p21 protein activator 2##NM_006506|RASA2|5922|RAS p21 protein activator 2##NM_001201370|RNF7|9616|ring finger protein 7##NM_014245|RNF7|9616|ring finger protein 7##NM_183237|RNF7|9616|ring finger protein 7##AK311982|RNF7|9616|ring finger protein 7	0.0	
chr5	158560266	158560394	reg1002765.p2	14.111	+	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	-33588	-	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	-33873	-	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1274240	-	AK304228 NM_001199382	74318	-	AK056513 NM_144726	74503	-	AK311433 AK304435 NM_001199381	74779	-	BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145##AK056513|RNF145|153830|ring finger protein 145##NM_144726|RNF145|153830|ring finger protein 145##AK311433|RNF145|153830|ring finger protein 145##AK304435|RNF145|153830|ring finger protein 145##NM_001199381|RNF145|153830|ring finger protein 145	0.884502	CTCF.p2:27:0.885
chr8	27283793	27283919	reg1003726.p1	14.108	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-100779	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-100804	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-100839	+	AK314787 U62431 NM_000742	52915	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	64802	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	188349	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	0.873179	CTCF.p2:49:0.873
chr21	45230756	45230897	reg1004394.p1	14.104	+	TSC_hg19_v1_chr21_+_45209457 AK223185 AK303000 AK223215 AK313116 BC000380 U79775 CU674182 DQ891391 DQ894567 BC014787	-21341	+	TSC_hg19_v1_chr21_+_45209429 NM_003683	-21411	+	TSC_hg19_v1_chr21_-_45196227 BC010532 L03558 NM_000100	-34597	-	TSC_hg19_v1_chr21_+_45285029 AY358704	54234	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	54297	+	AK300562 NM_001037553	114452	+	AK223185|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK303000|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK223215|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK313116|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC000380|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##U79775|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ891391|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ894567|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC014787|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##NM_003683|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC010532|CSTB|1476|cystatin B (stefin B)##L03558|CSTB|1476|cystatin B (stefin B)##NM_000100|CSTB|1476|cystatin B (stefin B)##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3	0.216282	CTCF.p2:-8:0.216
chr9	132372893	132373048	reg1002968.p2	14.102	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	-121529	+	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	-121616	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-289675	+	BC112353 AK093122 AX747938 NM_199350	10067	-	TSC_hg19_v1_chr9_+_132388441 NM_014064 AK290957 AK292332 AK298840 AK307056 AK313829	15455	+	TSC_hg19_v1_chr9_+_132388461 BC001396 BC033234 AF110776	15500	+	BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50##NM_014064|METTL11A|28989|methyltransferase like 11A##AK290957|METTL11A|28989|methyltransferase like 11A##AK292332|METTL11A|28989|methyltransferase like 11A##AK298840|METTL11A|28989|methyltransferase like 11A##AK307056|METTL11A|28989|methyltransferase like 11A##AK313829|METTL11A|28989|methyltransferase like 11A##BC001396|METTL11A|28989|methyltransferase like 11A##BC033234|METTL11A|28989|methyltransferase like 11A##AF110776|METTL11A|28989|methyltransferase like 11A	0.067875	
chr1	10007	10187	reg1021305.p2	14.101	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	19308	-	NM_001005484	58993	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	357551	+	AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16	0.0	
chr4	13550647	13550786	reg1003626.p1	14.101	+	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-1302	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-4641	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	-64741	-	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	78601	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	1452993	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	1453279	-	BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009	0.981728	CTCF.p2:16:0.982
chr1	40609808	40609950	reg1004585.p1	14.100	+	NM_000310 NM_001142604	-46738	-	AK302232 AK310799 TSC_hg19_v1_chr1_-_40562925	-46952	-	TSC_hg19_v1_chr1_-_40562918 BC008426	-46960	-	TSC_hg19_v1_chr1_+_40627044 BC113666 NM_012421	17160	+	TSC_hg19_v1_chr1_+_40627058 AK307662 U22377 X58480	17178	+	TSC_hg19_v1_chr1_+_40627068 HQ258544	17197	+	NM_000310|PPT1|5538|palmitoyl-protein thioesterase 1##NM_001142604|PPT1|5538|palmitoyl-protein thioesterase 1##AK302232|PPT1|5538|palmitoyl-protein thioesterase 1##AK310799|PPT1|5538|palmitoyl-protein thioesterase 1##BC008426|PPT1|5538|palmitoyl-protein thioesterase 1##BC113666|RLF|6018|rearranged L-myc fusion##NM_012421|RLF|6018|rearranged L-myc fusion##AK307662|RLF|6018|rearranged L-myc fusion##U22377|RLF|6018|rearranged L-myc fusion##HQ258544|RLF|6018|rearranged L-myc fusion	0.979659	CTCF.p2:-20:0.980
chr6	2846679	2846800	reg1002133.p1	14.100	+	TSC_hg19_v1_chr6_-_2842202 AK304641 AK309765	-4542	-	TSC_hg19_v1_chr6_-_2842095 BC009015 NM_030666 M93056 AK298044 AK312973 AK223370 AK291327	-4657	-	TSC_hg19_v1_chr6_-_2840686 BT006928 AB590702	-5987	-	TSC_hg19_v1_chr6_-_2903544 BC002538 AB060690 L40378 AK314842 NM_004155	56769	-	AK098566 TSC_hg19_v1_chr6_-_2971511	124675	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	125072	-	AK304641|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK309765|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BT006928|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC002538|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AB060690|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##L40378|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK314842|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##NM_004155|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK098566|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6	0.982593	CTCF.p2:-13:0.983
chr7	99577491	99577645	reg1005243.p1	14.100	+	D90427 M76707 BC014470 AB463407 CU689768 X59766 BC005306 TSC_hg19_v1_chr7_-_99573655 BC005908 BC033830 NM_001185	-3883	-	AB528858 AF503615 AY297109 NM_181538	-50326	-	TSC_hg19_v1_chr7_-_99517154 AF220023 AF220024 AK092892 AX747794 NM_033017 NM_033091	-60373	-	TSC_hg19_v1_chr7_+_99613225 AL833578 NM_003439 AF454940 AK054676 AY260738 BC022378 BX640646 AK091471 AX747005 AK074116	35657	+	BC112224 BC113697 CU692588 EU446909 HQ258578 TSC_hg19_v1_chr7_+_99621246	43597	+	TSC_hg19_v1_chr7_+_99627917 U09848	50370	+	D90427|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##M76707|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC014470|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##X59766|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC005306|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC005908|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC033830|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##NM_001185|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##AF503615|GJC3|349149|gap junction protein, gamma 3, 30.2kDa##AY297109|GJC3|349149|gap junction protein, gamma 3, 30.2kDa##NM_181538|GJC3|349149|gap junction protein, gamma 3, 30.2kDa##AF220023|TRIM4|89122|tripartite motif containing 4##AF220024|TRIM4|89122|tripartite motif containing 4##AK092892|TRIM4|89122|tripartite motif containing 4##NM_033017|TRIM4|89122|tripartite motif containing 4##NM_033091|TRIM4|89122|tripartite motif containing 4##AL833578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##NM_003439|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AF454940|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK054676|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AY260738|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC022378|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BX640646|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK091471|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK074116|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC112224|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC113697|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##EU446909|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##HQ258578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##U09848|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1	0.999863	CTCF.p2:-1:1.000
chr8	86132975	86133103	reg1003185.p2	14.098	+	TSC_hg19_v1_chr8_+_86132857 AK093753	-248	+	BC032347 TSC_hg19_v1_chr8_-_86132612 BC146983 BC146988 BC157825 BC171873 AK000414 BC055092 BC062221 NM_001099670 NM_001099671 NM_001099672 NM_001099673	-435	-	NM_001083589	-33130	+	TSC_hg19_v1_chr8_+_86157708 NM_198584	24668	+	TSC_hg19_v1_chr8_+_86157743 BC052602	24704	+	TSC_hg19_v1_chr8_+_86158005 AK095314	24966	+	BC032347|C8orf59|401466|chromosome 8 open reading frame 59##BC146983|C8orf59|401466|chromosome 8 open reading frame 59##BC146988|C8orf59|401466|chromosome 8 open reading frame 59##BC157825|C8orf59|401466|chromosome 8 open reading frame 59##BC171873|C8orf59|401466|chromosome 8 open reading frame 59##BC055092|C8orf59|401466|chromosome 8 open reading frame 59##BC062221|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099670|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099671|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099672|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099673|C8orf59|401466|chromosome 8 open reading frame 59##NM_001083589|E2F5|1875|E2F transcription factor 5, p130-binding##NM_198584|CA13|377677|carbonic anhydrase XIII##BC052602|CA13|377677|carbonic anhydrase XIII##AK095314|CA13|377677|carbonic anhydrase XIII	0.203135	CTCF.p2:-10:0.203
chr2	24605377	24605484	reg1003156.p1	14.097	+	TSC_hg19_v1_chr2_-_24583385 AB033082 BC146779 AF182198 AF182199 BC038963 NM_006277 NM_019595 NM_147152	-21950	-	BC050462 NM_001040710	-207459	+	TSC_hg19_v1_chr2_+_24346339 NM_001145710	-259071	+	NM_003743 NM_147223 NM_147233 AJ000881 AJ000882 U59302	201947	+	TSC_hg19_v1_chr2_-_25016225 CU687260 BC073803 NM_001013663	410808	-	NM_001199803 AK027859 TSC_hg19_v1_chr2_+_25016332 NM_024322 BC002870 AK315483	410841	+	AB033082|ITSN2|50618|intersectin 2##BC146779|ITSN2|50618|intersectin 2##AF182198|ITSN2|50618|intersectin 2##AF182199|ITSN2|50618|intersectin 2##BC038963|ITSN2|50618|intersectin 2##NM_006277|ITSN2|50618|intersectin 2##NM_019595|ITSN2|50618|intersectin 2##NM_147152|ITSN2|50618|intersectin 2##BC050462|C2orf84|653140|chromosome 2 open reading frame 84##NM_001040710|C2orf84|653140|chromosome 2 open reading frame 84##NM_001145710|LOC375190|375190|UPF0638 protein B##NM_003743|NCOA1|8648|nuclear receptor coactivator 1##NM_147223|NCOA1|8648|nuclear receptor coactivator 1##NM_147233|NCOA1|8648|nuclear receptor coactivator 1##AJ000881|NCOA1|8648|nuclear receptor coactivator 1##AJ000882|NCOA1|8648|nuclear receptor coactivator 1##U59302|NCOA1|8648|nuclear receptor coactivator 1##BC073803|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001013663|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001199803|CENPO|79172|centromere protein O##AK027859|CENPO|79172|centromere protein O##NM_024322|CENPO|79172|centromere protein O##BC002870|CENPO|79172|centromere protein O##AK315483|CENPO|79172|centromere protein O	0.576201	CTCF.p2:33:0.576
chr4	8194543	8194653	reg1003029.p1	14.097	+	DQ413176 AJ748600 AJ748601 TSC_hg19_v1_chr4_-_8160541 BC122567 AK130044 AK094754 BC067214 NM_001130083 NM_001130084 NM_001130085 NM_001130086 NM_001130087 NM_001130088 NM_032432	-34064	-	TSC_hg19_v1_chr4_-_8129388 AK301060	-65213	-	TSC_hg19_v1_chr4_-_8073714 AK094798	-120882	-	TSC_hg19_v1_chr4_+_8201038 BC030283 AK074093 NM_018986 BC068094 AK074402 AK126165 BC131785	6434	+	TSC_hg19_v1_chr4_+_8271480 NM_053044 AY040094 BC034390 BC035717 AY280665 AY280666 AB528940 DQ891188 DQ894371	76977	+	TSC_hg19_v1_chr4_-_8430196 AK313242	235603	-	DQ413176|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748600|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748601|ABLIM2|84448|actin binding LIM protein family, member 2##BC122567|ABLIM2|84448|actin binding LIM protein family, member 2##AK130044|ABLIM2|84448|actin binding LIM protein family, member 2##AK094754|ABLIM2|84448|actin binding LIM protein family, member 2##BC067214|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130083|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130084|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130085|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130086|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130087|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130088|ABLIM2|84448|actin binding LIM protein family, member 2##NM_032432|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##BC030283|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074093|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##NM_018986|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC068094|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074402|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK126165|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC131785|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##NM_053044|HTRA3|94031|HtrA serine peptidase 3##AY040094|HTRA3|94031|HtrA serine peptidase 3##BC034390|HTRA3|94031|HtrA serine peptidase 3##BC035717|HTRA3|94031|HtrA serine peptidase 3##AY280665|HTRA3|94031|HtrA serine peptidase 3##AY280666|HTRA3|94031|HtrA serine peptidase 3##DQ891188|HTRA3|94031|HtrA serine peptidase 3##DQ894371|HTRA3|94031|HtrA serine peptidase 3##AK313242|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl	0.906812	CTCF.p2:-20:0.907
chr9	75722562	75722672	reg1000883.p1	14.096	+	NM_000689	-154385	-	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	-154672	-	AF417578 NM_138691	-585901	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	44161	+	TSC_hg19_v1_chr9_+_75766797 BC001275	44186	+	NM_006914 BC051830 Y08639	1389657	+	NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##BC001275|ANXA1|301|annexin A1##NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B	0.960674	CTCF.p2:4:0.961
chr16	29482573	29482672	reg1002012.p1	14.093	+	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	-11396	+	BC022832 NM_001031827 NM_001039182	-16338	-	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	-16771	+	CU687812 AK304513 TSC_hg19_v1_chr16_-_29606405	123723	-	TSC_hg19_v1_chr16_-_29606667 AK316536	124051	-	AB040413 AB055226 TSC_hg19_v1_chr16_-_29625045	142420	-	AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK304513|LOC440354|440354|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene	0.830069	CTCF.p2:-6:0.830
chr18	43861273	43861383	reg1003221.p1	14.093	+	TSC_hg19_v1_chr18_+_43754065 AK289738	-107246	+	TSC_hg19_v1_chr18_+_43754007 BC084579	-107313	+	TSC_hg19_v1_chr18_+_43754002 NM_001008239 NM_145055 AK292981	-107334	+	TSC_hg19_v1_chr18_+_43913942 AK055997	52604	+	AK091537 AK122819 AK127467 AX747044 NM_152470	52858	+	AK057232 BC047720 NM_001145473 NM_001173129	237712	-	AK289738|C18orf25|147339|chromosome 18 open reading frame 25##BC084579|C18orf25|147339|chromosome 18 open reading frame 25##NM_001008239|C18orf25|147339|chromosome 18 open reading frame 25##NM_145055|C18orf25|147339|chromosome 18 open reading frame 25##AK292981|C18orf25|147339|chromosome 18 open reading frame 25##AK055997|RNF165|494470|ring finger protein 165##AK091537|RNF165-IT1|147341|RNF165 intronic transcript 1 (non-protein coding)##AK122819|RNF165|494470|ring finger protein 165##AK127467|RNF165|494470|ring finger protein 165##NM_152470|RNF165|494470|ring finger protein 165##AK057232|LOXHD1|125336|lipoxygenase homology domains 1##BC047720|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145473|LOXHD1|125336|lipoxygenase homology domains 1##NM_001173129|LOXHD1|125336|lipoxygenase homology domains 1	0.533021	CTCF.p2:-16:0.533
chr8	143553376	143553498	reg1003548.p1	14.093	+	AB005297 NM_001702	-8061	+	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	-68900	-	BC144560 AK125848 AK131461 NM_207414	-1036120	-	AF193421 D87468 BC075802 BC012321 NM_015193 TSC_hg19_v1_chr8_-_143695839	142389	-	TSC_hg19_v1_chr8_-_143751386 BC071862	197917	-	TSC_hg19_v1_chr8_-_143751397 AK127631 NM_001077527 NM_003724 BX640755	197964	-	AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein##AF193421|ARC|23237|activity-regulated cytoskeleton-associated protein##D87468|ARC|23237|activity-regulated cytoskeleton-associated protein##BC075802|ARC|23237|activity-regulated cytoskeleton-associated protein##BC012321|ARC|23237|activity-regulated cytoskeleton-associated protein##NM_015193|ARC|23237|activity-regulated cytoskeleton-associated protein##BC071862|JRK|8629|jerky homolog (mouse)##AK127631|JRK|8629|jerky homolog (mouse)##NM_001077527|JRK|8629|jerky homolog (mouse)##NM_003724|JRK|8629|jerky homolog (mouse)##BX640755|JRK|8629|jerky homolog (mouse)	0.61953	CTCF.p2:10:0.620
chr9	87758069	87758190	reg1004337.p1	14.093	+	U12140 TSC_hg19_v1_chr9_+_87285349	-472797	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-473377	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-473433	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	598742	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	797945	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	798049	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.0	
chr14	55556398	55556513	reg1003338.p1	14.092	+	AK025580 TSC_hg19_v1_chr14_+_55518408 BC015621	-38024	+	TSC_hg19_v1_chr14_+_55518382 AL834285	-38078	+	TSC_hg19_v1_chr14_+_55518364 NM_144578 AK315501	-38115	+	TSC_hg19_v1_chr14_+_55595963 NM_001177388 NM_002306 AK314929	39493	+	TSC_hg19_v1_chr14_+_55595969 AB006780 BC053667 BC068068 M36682 BC001120 M35368 M57710	39530	+	TSC_hg19_v1_chr14_-_55650349 BT007344	93951	-	AK025580|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##BC015621|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##AL834285|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##NM_144578|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##AK315501|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##NM_001177388|LGALS3|3958|lectin, galactoside-binding, soluble, 3##NM_002306|LGALS3|3958|lectin, galactoside-binding, soluble, 3##AK314929|LGALS3|3958|lectin, galactoside-binding, soluble, 3##AB006780|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC053667|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC068068|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M36682|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC001120|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M35368|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M57710|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5	0.999661	CTCF.p2:12:1.000
chr1	6780178	6780299	reg1002870.p1	14.092	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-18307	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-18356	-	AL833841 BC008772 TSC_hg19_v1_chr1_-_6761875 CU675235 CU680804 BC006086 AK294539 AF306694 AK001599 BC014145 AY336749	-18381	-	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	65253	+	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	1051138	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	1064171	+	NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AL833841|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC008772|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC006086|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AK294539|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306694|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AK001599|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC014145|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AY336749|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)	0.998074	CTCF.p2:-4:0.998
chrX	62470259	62470397	reg1003973.p1	14.092	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-4533369	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-4851868	+	NM_007157	-4852060	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	100871	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	177939	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	310539	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.0	
chr19	49009522	49009645	reg1002618.p1	14.090	+	TSC_hg19_v1_chr19_+_48972625 AB209573 BC038713 AK292405 U70728 AK299590 BC004361 AB528907 DQ892565 DQ896856 X99753	-36914	+	NM_004228 NM_017457 TSC_hg19_v1_chr19_+_48972572	-37065	+	BC035918 NM_170720	-45078	+	AB384647 TSC_hg19_v1_chr19_-_49014849	5257	-	AB067470 NM_001080434	6848	-	TSC_hg19_v1_chr19_+_49055432 NM_177973 U92315 BC034694 CU689942	45881	+	AB209573|CYTH2|9266|cytohesin 2##BC038713|CYTH2|9266|cytohesin 2##AK292405|CYTH2|9266|cytohesin 2##U70728|CYTH2|9266|cytohesin 2##AK299590|CYTH2|9266|cytohesin 2##BC004361|CYTH2|9266|cytohesin 2##DQ892565|CYTH2|9266|cytohesin 2##DQ896856|CYTH2|9266|cytohesin 2##X99753|CYTH2|9266|cytohesin 2##NM_004228|CYTH2|9266|cytohesin 2##NM_017457|CYTH2|9266|cytohesin 2##BC035918|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##NM_170720|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##AB067470|LMTK3|114783|lemur tyrosine kinase 3##NM_001080434|LMTK3|114783|lemur tyrosine kinase 3##NM_177973|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##U92315|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##BC034694|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1	0.593021	CTCF.p2:-19:0.593
chr7	50535847	50535979	reg1004316.p1	14.090	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	-17859	-	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	-187594	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	-191560	+	AJ310724 BC000485 BC008366 M76180 AK298321 NM_000790 NM_001242886 NM_001242887 NM_001242888 NM_001242889 NM_001242890 TSC_hg19_v1_chr7_-_50628769	92846	-	M88700 TSC_hg19_v1_chr7_-_50633103 AK298392 NM_001082971	97184	-	NM_001001550 U66065 U69276	237084	-	BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1##AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AJ310724|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC000485|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC008366|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##M76180|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298321|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_000790|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242886|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242887|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242888|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242889|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242890|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##M88700|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298392|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001082971|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001001550|GRB10|2887|growth factor receptor-bound protein 10##U66065|GRB10|2887|growth factor receptor-bound protein 10##U69276|GRB10|2887|growth factor receptor-bound protein 10	0.739997	CTCF.p2:-10:0.740
chr9	69259721	69259840	reg1003003.p1	14.090	+	NM_001085476	-57577	-	TSC_hg19_v1_chr9_+_69065493 AK311167	-194242	+	TSC_hg19_v1_chr9_+_68726468 AK311167	-533278	+	AF265442 BC069006 AK293173 NM_001085457	2774	-	AL136793 NM_001098805	122200	+	NM_001126334	919034	-	NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5	0.584332	CTCF.p2:-1:0.584
chr6	137397807	137397933	reg1004243.p1	14.088	+	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	-31625	-	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	-32032	-	AK316095 BC087842 NM_001008783 AK295424	-154417	+	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	96881	-	TSC_hg19_v1_chr6_-_137540496 BT006814 AB527981 CU675119 AF056979 AK294252	142598	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	142642	-	AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2##BT006814|IFNGR1|3459|interferon gamma receptor 1##AF056979|IFNGR1|3459|interferon gamma receptor 1##AK294252|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1	0.46272	CTCF.p2:-15:0.463
chr8	42029266	42029419	reg1003161.p1	14.087	+	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	-18809	+	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	-119843	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-275032	-	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	35746	-	AK289387 AK290575 NM_000930 NM_033011 TSC_hg19_v1_chr8_-_42065195	35852	-	TSC_hg19_v1_chr8_+_42128819 NM_001190720 NM_001242778 NM_001556	99466	+	NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue##AK289387|PLAT|5327|plasminogen activator, tissue##AK290575|PLAT|5327|plasminogen activator, tissue##NM_000930|PLAT|5327|plasminogen activator, tissue##NM_033011|PLAT|5327|plasminogen activator, tissue##NM_001190720|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001242778|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001556|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	0.018111	
chr6	166511512	166511634	reg1003950.p1	14.085	+	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	-110039	-	TSC_hg19_v1_chr6_-_166401424 AK289375	-110140	-	AY203946 TSC_hg19_v1_chr6_-_166076051	-435521	-	BC098425 NM_003181	70556	-	BC034775 NM_175922 TSC_hg19_v1_chr6_-_166721880	210303	-	BC018969 NM_145169 TSC_hg19_v1_chr6_-_166756020	244434	-	BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##AK289375|LINC00473|90632|long intergenic non-protein coding RNA 473##AY203946|LOC100132188|100132188|LP7097##BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)##BC034775|PRR18|285800|proline rich 18##NM_175922|PRR18|285800|proline rich 18##BC018969|SFT2D1|113402|SFT2 domain containing 1##NM_145169|SFT2D1|113402|SFT2 domain containing 1	0.922138	CTCF.p2:-4:0.922
chr7	140193022	140193111	reg1002470.p2	14.083	+	TSC_hg19_v1_chr7_-_140179348 NM_001145125 NM_013446	-13716	-	TSC_hg19_v1_chr7_-_140179306 AF192784 AL136812 AF117233 BC025955	-13796	-	TSC_hg19_v1_chr7_-_140179165 AB209298 AB527778 DQ892404 EU176516 BC064838 AM236048 BC037400 BC051821 BC012398 AK297361 AK315552	-13904	-	BC132875 BC144190 NM_015689	109260	-	AB033103 TSC_hg19_v1_chr7_-_140340614	147544	-	TSC_hg19_v1_chr7_+_140372910 AF131745 AY302592 NM_052853 BC014107	179872	+	NM_001145125|MKRN1|23608|makorin ring finger protein 1##NM_013446|MKRN1|23608|makorin ring finger protein 1##AF192784|MKRN1|23608|makorin ring finger protein 1##AL136812|MKRN1|23608|makorin ring finger protein 1##AF117233|MKRN1|23608|makorin ring finger protein 1##BC025955|MKRN1|23608|makorin ring finger protein 1##AB209298|MKRN1|23608|makorin ring finger protein 1##DQ892404|MKRN1|23608|makorin ring finger protein 1##EU176516|MKRN1|23608|makorin ring finger protein 1##BC064838|MKRN1|23608|makorin ring finger protein 1##AM236048|MKRN1|23608|makorin ring finger protein 1##BC037400|MKRN1|23608|makorin ring finger protein 1##BC051821|MKRN1|23608|makorin ring finger protein 1##BC012398|MKRN1|23608|makorin ring finger protein 1##AK297361|MKRN1|23608|makorin ring finger protein 1##AK315552|MKRN1|23608|makorin ring finger protein 1##BC132875|DENND2A|27147|DENN/MADD domain containing 2A##BC144190|DENND2A|27147|DENN/MADD domain containing 2A##NM_015689|DENND2A|27147|DENN/MADD domain containing 2A##AB033103|DENND2A|27147|DENN/MADD domain containing 2A##AF131745|ADCK2|90956|aarF domain containing kinase 2##AY302592|ADCK2|90956|aarF domain containing kinase 2##NM_052853|ADCK2|90956|aarF domain containing kinase 2##BC014107|ADCK2|90956|aarF domain containing kinase 2	0.4028	CTCF.p2:7:0.403
chr12	54137500	54137635	reg1004259.p1	14.082	+	AB040969 TSC_hg19_v1_chr12_-_54121231 AF370415 AY563137 BC003177 AY358397 AL136895 AK122773 AK222646 AK092788 AX747731 AK294424 AK296497 AK309199 AK027881 AK315578 NM_001143682 NM_020898	-16313	-	NM_001002031	-67056	-	NM_005176	-67459	-	AF255676 NM_017410 BC090850 AF263466 BC002754 BT009908	195065	+	TSC_hg19_v1_chr12_+_54348683 AB464579 NM_173860	211131	+	NM_014212 AK291946 BC001543 AJ000041 CU674756	229400	+	AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1##BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001002031|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##NM_005176|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##AF255676|HOXC13|3229|homeobox C13##NM_017410|HOXC13|3229|homeobox C13##BC090850|HOXC13|3229|homeobox C13##AF263466|HOXC13|3229|homeobox C13##BC002754|HOXC13|3229|homeobox C13##BT009908|HOXC13|3229|homeobox C13##NM_173860|HOXC12|3228|homeobox C12##NM_014212|HOXC11|3227|homeobox C11##AK291946|HOXC11|3227|homeobox C11##BC001543|HOXC11|3227|homeobox C11##AJ000041|HOXC11|3227|homeobox C11	1.209593	CTCF.p2:4:0.999	CTCF.p2:-84:0.211
chr14	45737867	45737999	reg1004866.p1	14.081	+	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-15287	-	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	-15566	-	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-132744	+	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	1383050	-	BC028193 NM_182830	2074482	-	AK309211 NM_001113498	2406223	-	AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	0.994198	CTCF.p2:5:0.994
chr2	11878764	11878884	reg1003051.p1	14.081	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-68533	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-195981	+	TSC_hg19_v1_chr2_+_11682798 BC071853	-196023	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	7951	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	978429	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	979092	+	AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.668851	CTCF.p2:-18:0.669
chr10	86024475	86024608	reg1004201.p1	14.080	+	BX641033 NM_001012720 NM_001012722 NM_002921 U14910 BC011349 BC008094 BC042536 CU675929 DQ892074 DQ895267	-19714	+	AB463829 AB031547 NM_015613 DQ426882 DQ426881	-23274	-	BX648524 NM_001017924 BC140765 BC144475	-39228	-	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	63853	+	AB032954 TSC_hg19_v1_chr10_+_86131668	107077	+	TSC_hg19_v1_chr10_+_86184685 AK294321	160154	+	BX641033|RGR|5995|retinal G protein coupled receptor##NM_001012720|RGR|5995|retinal G protein coupled receptor##NM_001012722|RGR|5995|retinal G protein coupled receptor##NM_002921|RGR|5995|retinal G protein coupled receptor##U14910|RGR|5995|retinal G protein coupled receptor##BC011349|RGR|5995|retinal G protein coupled receptor##BC008094|RGR|5995|retinal G protein coupled receptor##BC042536|RGR|5995|retinal G protein coupled receptor##DQ892074|RGR|5995|retinal G protein coupled receptor##DQ895267|RGR|5995|retinal G protein coupled receptor##AB031547|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##NM_015613|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##BX648524|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##NM_001017924|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC140765|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC144475|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##AK294321|FAM190B|54462|family with sequence similarity 190, member B	0.995391	CTCF.p2:-14:0.995
chr12	54585445	54585569	reg1002799.p2	14.080	+	BC088352 BC000417 TSC_hg19_v1_chr12_-_54582755 AK091468 AX747003 NM_001243789 NM_001243790 BC105607 AK001789 AK001235 AK222473 AK290274 NM_001243787 NM_001243788 NM_001243791 NM_014311	-2821	-	BC030212 TSC_hg19_v1_chr12_-_54541132	-44426	-	TSC_hg19_v1_chr12_+_54519846 BC009385	-65649	+	BC006821 NM_001127322 TSC_hg19_v1_chr12_-_54653330	67817	-	NM_001127321 TSC_hg19_v1_chr12_-_54653370	67864	-	TSC_hg19_v1_chr12_-_54673880 L07515 S62077	88375	-	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC009385|LOC400043|400043|uncharacterized LOC400043##BC006821|CBX5|23468|chromobox homolog 5##NM_001127322|CBX5|23468|chromobox homolog 5##NM_001127321|CBX5|23468|chromobox homolog 5##L07515|CBX5|23468|chromobox homolog 5##S62077|CBX5|23468|chromobox homolog 5	0.421834	CTCF.p2:18:0.422
chr16	85004267	85004393	reg1004119.p1	14.080	+	TSC_hg19_v1_chr16_+_84853586 NM_031476 AY358790 AK303887 AK308396 AY358413 BC063012 BC007689 AL136861 AK027395	-150727	+	TSC_hg19_v1_chr16_+_84733611 AL162049 BX537402 D80012	-270700	+	TSC_hg19_v1_chr16_+_84733609 AK293304 AK299618	-270723	+	TSC_hg19_v1_chr16_-_85045098 AK225768	40763	-	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	40799	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	57040	+	NM_031476|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AY358790|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK303887|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK308396|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC063012|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC007689|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AL136861|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK027395|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AL162049|USP10|9100|ubiquitin specific peptidase 10##BX537402|USP10|9100|ubiquitin specific peptidase 10##D80012|USP10|9100|ubiquitin specific peptidase 10##AK293304|USP10|9100|ubiquitin specific peptidase 10##AK299618|USP10|9100|ubiquitin specific peptidase 10##AK225768|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513	0.99994	CTCF.p2:-4:1.000
chr6	131019197	131019336	reg1002805.p2	14.079	+	AB052099 NM_052913	-261005	+	AK091882 AX747235 NM_001017373	-475168	-	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	-482811	-	BC113027 NM_001195597 AK091900 AX747243 BC101422 BC101423 BC101424 BC101425 BC113026 TSC_hg19_v1_chr6_+_131148577	129296	+	TSC_hg19_v1_chr6_-_131291480 AK307764 NM_001199389	272285	-	CR749262 CR936793 NM_001252660	302621	-	AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A##AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##BC113027|LOC100507203|100507203|uncharacterized LOC100507203##NM_001195597|LOC100507203|100507203|uncharacterized LOC100507203##AK091900|LOC100507203|100507203|uncharacterized LOC100507203##BC101422|LOC100507203|100507203|uncharacterized LOC100507203##BC101423|LOC100507203|100507203|uncharacterized LOC100507203##BC101424|LOC100507203|100507203|uncharacterized LOC100507203##BC101425|LOC100507203|100507203|uncharacterized LOC100507203##BC113026|LOC100507203|100507203|uncharacterized LOC100507203##AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	1.172834	CTCF.p2:3:0.996
chr6	166689294	166689428	reg1003524.p1	14.079	+	BC098425 NM_003181	-107232	-	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	-287827	-	TSC_hg19_v1_chr6_-_166401424 AK289375	-287928	-	BC034775 NM_175922 TSC_hg19_v1_chr6_-_166721880	32515	-	BC018969 NM_145169 TSC_hg19_v1_chr6_-_166756020	66646	-	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	66673	-	BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)##BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##AK289375|LINC00473|90632|long intergenic non-protein coding RNA 473##BC034775|PRR18|285800|proline rich 18##NM_175922|PRR18|285800|proline rich 18##BC018969|SFT2D1|113402|SFT2 domain containing 1##NM_145169|SFT2D1|113402|SFT2 domain containing 1##AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1	0.323174	CTCF.p2:-4:0.323
chr8	11623088	11623221	reg1003015.p1	14.079	+	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	-61434	+	S76617 NM_001715 BC018703 BC004473 BC038555	-271561	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-298925	-	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	4114	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	37030	+	TSC_hg19_v1_chr8_+_11660249 AK296043 AK315993 AK311246 X69141 AK301617	37084	+	NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##AK296043|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##AK315993|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##AK311246|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##X69141|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##AK301617|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.0	
chr14	65290071	65290198	reg1003284.p1	14.078	+	AB384944 BC136284 BC136285 NM_000347 NM_001024858	-296	-	TSC_hg19_v1_chr14_+_65171243 BC129952 BC129953	-118856	+	TSC_hg19_v1_chr14_+_65171178 BX248779 NM_015549	-118962	+	J05500 AB209415 TSC_hg19_v1_chr14_-_65346722	56509	-	NM_001202558 NM_001202559 NM_001204063 NM_001204064 NM_145165 BC020550 TSC_hg19_v1_chr14_+_65381175 AK315905 AF060510 AK057626	90993	+	TSC_hg19_v1_chr14_+_65381184 AK296141 AK303739 AK296850	91060	+	BC136284|SPTB|6710|spectrin, beta, erythrocytic##BC136285|SPTB|6710|spectrin, beta, erythrocytic##NM_000347|SPTB|6710|spectrin, beta, erythrocytic##NM_001024858|SPTB|6710|spectrin, beta, erythrocytic##BC129952|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BC129953|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BX248779|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##NM_015549|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##J05500|SPTB|6710|spectrin, beta, erythrocytic##AB209415|SPTB|6710|spectrin, beta, erythrocytic##NM_001202558|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##NM_001202559|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##NM_001204063|CHURC1|91612|churchill domain containing 1##NM_001204064|CHURC1|91612|churchill domain containing 1##NM_145165|CHURC1|91612|churchill domain containing 1##BC020550|CHURC1|91612|churchill domain containing 1##AK315905|CHURC1|91612|churchill domain containing 1##AF060510|CHURC1|91612|churchill domain containing 1##AK057626|CHURC1|91612|churchill domain containing 1##AK296141|CHURC1|91612|churchill domain containing 1##AK303739|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##AK296850|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough	0.972977	CTCF.p2:-15:0.973
chr10	90313048	90313169	reg1003585.p1	14.076	+	TSC_hg19_v1_chr10_+_89623420 U96180	-689681	+	TSC_hg19_v1_chr10_+_89623380 BC005821	-689719	+	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	-689882	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	29906	-	BC042900 BC031219 NM_001010939	33405	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	111072	+	U96180|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric	0.221842	CTCF.p2:10:0.222
chr12	53553289	53553414	reg1002026.p2	14.076	+	TSC_hg19_v1_chr12_+_53497289 AF059203 BC096090 BC096091 BC096092 BC099626 AF099031	-56027	+	NM_003578 TSC_hg19_v1_chr12_+_53497278	-56076	+	M62402 TSC_hg19_v1_chr12_+_53491450 AK313158 BC003507 BC011708 BC005007 DQ892995 DQ896243 AB528507 CR541791 M69054	-61874	+	AB044561 NM_001244706	4925	-	AF116545 AF116546 AF116547 AF116548 BC018042 AK315265 BC047466 NM_015989	21053	-	TSC_hg19_v1_chr12_+_53574505 AK292744	21140	+	AF059203|SOAT2|8435|sterol O-acyltransferase 2##BC096090|SOAT2|8435|sterol O-acyltransferase 2##BC096091|SOAT2|8435|sterol O-acyltransferase 2##BC096092|SOAT2|8435|sterol O-acyltransferase 2##BC099626|SOAT2|8435|sterol O-acyltransferase 2##AF099031|SOAT2|8435|sterol O-acyltransferase 2##NM_003578|SOAT2|8435|sterol O-acyltransferase 2##M62402|IGFBP6|3489|insulin-like growth factor binding protein 6##AK313158|IGFBP6|3489|insulin-like growth factor binding protein 6##BC003507|IGFBP6|3489|insulin-like growth factor binding protein 6##BC011708|IGFBP6|3489|insulin-like growth factor binding protein 6##BC005007|IGFBP6|3489|insulin-like growth factor binding protein 6##DQ892995|IGFBP6|3489|insulin-like growth factor binding protein 6##DQ896243|IGFBP6|3489|insulin-like growth factor binding protein 6##CR541791|IGFBP6|3489|insulin-like growth factor binding protein 6##M69054|IGFBP6|3489|insulin-like growth factor binding protein 6##AB044561|CSAD|51380|cysteine sulfinic acid decarboxylase##NM_001244706|CSAD|51380|cysteine sulfinic acid decarboxylase##AF116545|CSAD|51380|cysteine sulfinic acid decarboxylase##AF116546|CSAD|51380|cysteine sulfinic acid decarboxylase##AF116547|CSAD|51380|cysteine sulfinic acid decarboxylase##AF116548|CSAD|51380|cysteine sulfinic acid decarboxylase##BC018042|CSAD|51380|cysteine sulfinic acid decarboxylase##AK315265|CSAD|51380|cysteine sulfinic acid decarboxylase##BC047466|CSAD|51380|cysteine sulfinic acid decarboxylase##NM_015989|CSAD|51380|cysteine sulfinic acid decarboxylase##AK292744|ZNF740|283337|zinc finger protein 740	0.951341	CTCF.p2:-10:0.951
chr19	46320515	46320647	reg1003174.p2	14.075	+	BC057785 AB587490 AM393487 BC146683 BC136351 BC136352 BC144018 AK098837 AK223347 AL136761 NM_030785	-2063	-	TSC_hg19_v1_chr19_-_46296053 NM_004943	-24650	-	L19267 TSC_hg19_v1_chr19_-_46295709	-24903	-	AF049526 TSC_hg19_v1_chr19_-_46366406 Y10931 AB210010 BC030214 AK300252 BX649165 AK130602 NM_004819	45863	-	BC016024 NM_004497 TSC_hg19_v1_chr19_+_46367583 AK223473 AB464526 BT006720 CU677549 L12141	47034	+	AK223622 TSC_hg19_v1_chr19_-_46389398 AK315060 BC038222 NM_015649 AY278022 BC039002	68781	-	BC057785|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AM393487|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC146683|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC136351|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC136352|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC144018|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AK098837|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AK223347|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AL136761|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##NM_030785|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##NM_004943|DMWD|1762|dystrophia myotonica, WD repeat containing##L19267|DMWD|1762|dystrophia myotonica, WD repeat containing##AF049526|SYMPK|8189|symplekin##Y10931|SYMPK|8189|symplekin##AB210010|SYMPK|8189|symplekin##BC030214|SYMPK|8189|symplekin##AK300252|SYMPK|8189|symplekin##BX649165|SYMPK|8189|symplekin##AK130602|SYMPK|8189|symplekin##NM_004819|SYMPK|8189|symplekin##BC016024|FOXA3|3171|forkhead box A3##NM_004497|FOXA3|3171|forkhead box A3##AK223473|FOXA3|3171|forkhead box A3##BT006720|FOXA3|3171|forkhead box A3##L12141|FOXA3|3171|forkhead box A3##AK223622|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##AK315060|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##BC038222|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##NM_015649|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##AY278022|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##BC039002|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1	1.942832	CTCF.p2:-37:0.955	CTCF.p2:53:0.988
chr14	92116390	92116527	reg1004557.p1	14.074	+	TSC_hg19_v1_chr14_-_91976823 AK000714 BC038932 BC022778	-139651	-	TSC_hg19_v1_chr14_-_91976644 NM_032560	-139821	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	-139958	-	BC126214 BC126216 AK126034 NM_024764	81939	-	TSC_hg19_v1_chr14_-_92302762 BC040503 BX647828 AK126359 NM_001128595 NM_152332	186334	-	AK093876 AX748346 NM_001128596 TSC_hg19_v1_chr14_-_92333881	217410	-	AK000714|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##BC038932|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##BC022778|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##NM_032560|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##BC126214|CATSPERB|79820|cation channel, sperm-associated, beta##BC126216|CATSPERB|79820|cation channel, sperm-associated, beta##AK126034|CATSPERB|79820|cation channel, sperm-associated, beta##NM_024764|CATSPERB|79820|cation channel, sperm-associated, beta##BC040503|TC2N|123036|tandem C2 domains, nuclear##BX647828|TC2N|123036|tandem C2 domains, nuclear##AK126359|TC2N|123036|tandem C2 domains, nuclear##NM_001128595|TC2N|123036|tandem C2 domains, nuclear##NM_152332|TC2N|123036|tandem C2 domains, nuclear##AK093876|TC2N|123036|tandem C2 domains, nuclear##NM_001128596|TC2N|123036|tandem C2 domains, nuclear	0.348452	CTCF.p2:-8:0.348
chr17	38597360	38597467	reg1003098.p2	14.073	+	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	-23289	-	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	-76467	-	NM_001024809	-99143	+	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	2406	+	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	60433	-	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	124305	-	AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_001024809|RARA|5914|retinoic acid receptor, alpha##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7	0.514271	CTCF.p2:-1:0.514
chr22	42093216	42093355	reg1004807.p1	14.073	+	BC035403 NM_001142964 AK131457	-6727	+	AK124020 TSC_hg19_v1_chr22_-_42084824 BC005358 AF155235 NM_001003796	-8420	-	TSC_hg19_v1_chr22_-_42078457 CR456531 BC095439 AK311800 D50420 NM_005008	-14815	-	BC025400 NM_152513 BC035720 BC144638	2227	+	TSC_hg19_v1_chr22_+_42196682 NM_024821 AK026002 AK299311 BC017693 CR456484	103387	+	NM_004599 TSC_hg19_v1_chr22_+_42229105	135820	+	BC035403|C22orf46|79640|chromosome 22 open reading frame 46##NM_001142964|C22orf46|79640|chromosome 22 open reading frame 46##AK131457|C22orf46|79640|chromosome 22 open reading frame 46##BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##CR456531|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##BC095439|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##AK311800|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##D50420|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_005008|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##BC025400|MEI1|150365|meiosis inhibitor 1##NM_152513|MEI1|150365|meiosis inhibitor 1##BC035720|MEI1|150365|meiosis inhibitor 1##BC144638|MEI1|150365|meiosis inhibitor 1##NM_024821|CCDC134|79879|coiled-coil domain containing 134##AK026002|CCDC134|79879|coiled-coil domain containing 134##AK299311|CCDC134|79879|coiled-coil domain containing 134##BC017693|CCDC134|79879|coiled-coil domain containing 134##CR456484|CCDC134|79879|coiled-coil domain containing 134##NM_004599|SREBF2|6721|sterol regulatory element binding transcription factor 2	0.999743	CTCF.p2:-1:1.000
chr3	14715395	14715498	reg1003121.p1	14.071	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	-22163	+	TSC_hg19_v1_chr3_+_14693268 NM_016474 AK091158 AX746816 BC005199 BC033897 BC013999	-22188	+	NM_001080423	-131859	-	NM_001184957 NM_001184958 NM_032137 AK131481 BC030599 AL834386 AL136781 BC038406	1199	+	NM_152536	145022	+	TSC_hg19_v1_chr3_-_14988966 BC014104 BC063441 BC039246	273510	-	AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19##NM_016474|C3orf19|51244|chromosome 3 open reading frame 19##AK091158|C3orf19|51244|chromosome 3 open reading frame 19##BC005199|C3orf19|51244|chromosome 3 open reading frame 19##BC033897|C3orf19|51244|chromosome 3 open reading frame 19##BC013999|C3orf19|51244|chromosome 3 open reading frame 19##NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2##NM_001184957|C3orf20|84077|chromosome 3 open reading frame 20##NM_001184958|C3orf20|84077|chromosome 3 open reading frame 20##NM_032137|C3orf20|84077|chromosome 3 open reading frame 20##AK131481|C3orf20|84077|chromosome 3 open reading frame 20##BC030599|C3orf20|84077|chromosome 3 open reading frame 20##AL834386|C3orf20|84077|chromosome 3 open reading frame 20##AL136781|C3orf20|84077|chromosome 3 open reading frame 20##BC038406|C3orf20|84077|chromosome 3 open reading frame 20##NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5##BC014104|LOC100505641|100505641|uncharacterized LOC100505641##BC063441|LOC100505641|100505641|uncharacterized LOC100505641##BC039246|LOC100505641|100505641|uncharacterized LOC100505641	0.990542	CTCF.p2:8:0.991
chr11	94356421	94356560	reg1004302.p1	14.068	+	NM_152431 AB079366 AK093475 AX748151 BC031060 DQ891240 DQ894425 AB590313 CU689100	-55912	+	TSC_hg19_v1_chr11_+_94277605 M58596	-78891	+	AK293616 NM_002033 TSC_hg19_v1_chr11_+_94277086 M58597 BC136373 BC136374	-79411	+	TSC_hg19_v1_chr11_+_94501528 BX648729 NM_130847 AK093699 AX748266 AF453742 BC037539 AK074084 AM393663	145099	+	TSC_hg19_v1_chr11_-_94706721 AK309042 AF110775 AF161497 AK225956 AK314900 BC032629 AJ250393 BC040946 BC006975	350232	-	TSC_hg19_v1_chr11_-_94706742 NM_016403	350267	-	NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)##AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)##AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)##BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##AK293616|PIWIL4|143689|piwi-like 4 (Drosophila)##NM_002033|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58597|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136373|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136374|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BX648729|AMOTL1|154810|angiomotin like 1##NM_130847|AMOTL1|154810|angiomotin like 1##AK093699|AMOTL1|154810|angiomotin like 1##AF453742|AMOTL1|154810|angiomotin like 1##BC037539|AMOTL1|154810|angiomotin like 1##AK074084|AMOTL1|154810|angiomotin like 1##AM393663|AMOTL1|154810|angiomotin like 1##AK309042|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AF110775|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AF161497|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AK225956|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AK314900|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC032629|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AJ250393|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC040946|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC006975|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##NM_016403|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)	0.976884	CTCF.p2:-13:0.977
chr3	54887974	54888120	reg1004790.p1	14.067	+	TSC_hg19_v1_chr3_+_54156691 AF516696 NM_018398	-731356	+	BC137502 BC137505 TSC_hg19_v1_chr3_+_54156614	-731448	+	TSC_hg19_v1_chr3_-_53925897 AF537132 AK289594 BC013162 AK123406 AF085359 AF161415 NM_021237	-962118	-	BC074741 AF225421 NM_020678	73969	-	TSC_hg19_v1_chr3_-_55514935 CU687936 AB590996 BC074783	626897	-	TSC_hg19_v1_chr3_-_55515377 L20861	627328	-	AF516696|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##NM_018398|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137502|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137505|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##AF537132|SELK|58515|selenoprotein K##AK289594|SELK|58515|selenoprotein K##BC013162|SELK|58515|selenoprotein K##AK123406|SELK|58515|selenoprotein K##AF085359|SELK|58515|selenoprotein K##AF161415|SELK|58515|selenoprotein K##NM_021237|SELK|58515|selenoprotein K##BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A##L20861|WNT5A|7474|wingless-type MMTV integration site family, member 5A	0.991116	CTCF.p2:-18:0.991
chr10	75404018	75404153	reg1003793.p1	14.066	+	TSC_hg19_v1_chr10_-_75401524 AJ278124 BC025753 NM_021245	-2561	-	TSC_hg19_v1_chr10_-_75401273 AL359210 AF240633 AY013297 AK300683 AK308200	-2837	-	AJ583820 NM_152586	-68662	-	BC142635 BC131776 AK022983 NM_024875 TSC_hg19_v1_chr10_-_75410798	6703	-	AK295873 TSC_hg19_v1_chr10_-_75415805 AK095931 AB188489 NM_001114133	11727	-	NM_001144000	53468	-	AJ278124|MYOZ1|58529|myozenin 1##BC025753|MYOZ1|58529|myozenin 1##NM_021245|MYOZ1|58529|myozenin 1##AL359210|MYOZ1|58529|myozenin 1##AF240633|MYOZ1|58529|myozenin 1##AY013297|MYOZ1|58529|myozenin 1##AK300683|MYOZ1|58529|myozenin 1##AK308200|MYOZ1|58529|myozenin 1##AJ583820|USP54|159195|ubiquitin specific peptidase 54##NM_152586|USP54|159195|ubiquitin specific peptidase 54##BC142635|SYNPO2L|79933|synaptopodin 2-like##BC131776|SYNPO2L|79933|synaptopodin 2-like##AK022983|SYNPO2L|79933|synaptopodin 2-like##NM_024875|SYNPO2L|79933|synaptopodin 2-like##AK295873|SYNPO2L|79933|synaptopodin 2-like##AK095931|SYNPO2L|79933|synaptopodin 2-like##AB188489|SYNPO2L|79933|synaptopodin 2-like##NM_001114133|SYNPO2L|79933|synaptopodin 2-like##NM_001144000|AGAP5|729092|ArfGAP with GTPase domain, ankyrin repeat and PH domain 5	0.989655	CTCF.p2:12:0.990
chr8	7468770	7468906	reg1004422.p1	14.066	+	NM_001136572	-28664	-	NM_001136572	-51605	-	DQ119826 NM_001037668 NM_001040705 BC137510 BC137513 AF540979 AY122467	-115421	+	NM_001164452 NM_001164456	104126	+	NM_001164449 NM_001164451	111774	+	NM_001164450	127070	+	NM_001136572|FAM90A7|441317|family with sequence similarity 90, member A7##NM_001136572|FAM90A7|441317|family with sequence similarity 90, member A7##DQ119826|DEFB107A|245910|defensin, beta 107A##NM_001037668|DEFB107A|245910|defensin, beta 107A##NM_001040705|DEFB107B|503614|defensin, beta 107B##BC137510|DEFB107A|245910|defensin, beta 107A##BC137513|DEFB107A|245910|defensin, beta 107A##AF540979|DEFB107A|245910|defensin, beta 107A##AY122467|DEFB107A|245910|defensin, beta 107A##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164449|FAM90A19|728753|family with sequence similarity 90, member A19##NM_001164451|FAM90A18|441326|family with sequence similarity 90, member A18##NM_001164450|FAM90A8|441324|family with sequence similarity 90, member A8	0.999491	CTCF.p2:-15:0.999
chr7	24330000	24330140	reg1003138.p2	14.065	+	BC029497 NM_000905 AK312156 K01911 M15789	-6227	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-580154	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	-610247	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	283018	+	TSC_hg19_v1_chr7_-_24797042 BC099911	466967	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	466997	-	BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5	0.864296	CTCF.p2:-5:0.864
chr1	152158173	152158282	reg1003604.p1	14.062	+	AY396742 NM_001122965	-26524	-	NM_007113	-71672	-	BC137493 AY456639 NM_001008536	-96693	-	CR933683 TSC_hg19_v1_chr1_+_152161805	3568	+	AB180729 NM_001009931 AY396741	38442	-	L01090 NM_002016	139451	-	AY396742|RPTN|126638|repetin##NM_001122965|RPTN|126638|repetin##NM_007113|TCHH|7062|trichohyalin##BC137493|TCHHL1|126637|trichohyalin-like 1##AY456639|TCHHL1|126637|trichohyalin-like 1##NM_001008536|TCHHL1|126637|trichohyalin-like 1##AB180729|HRNR|388697|hornerin##NM_001009931|HRNR|388697|hornerin##AY396741|HRNR|388697|hornerin##L01090|FLG|2312|filaggrin##NM_002016|FLG|2312|filaggrin	0.455708	CTCF.p2:9:0.220	CTCF.p2:10:0.235
chr11	65652249	65652358	reg1003293.p2	14.062	+	BC048255 NM_001335 BC035637 AF013611	-4999	+	TSC_hg19_v1_chr11_-_65640272 AY358899 AK075453 AK315181 AB030655 AF109121 AK000980 AK292079 BC010456 BC018871 NM_016938	-12002	-	BC109225 TSC_hg19_v1_chr11_-_65638766	-13584	-	TSC_hg19_v1_chr11_-_65655968 AF171944 AF171945 AF171946 AF250391 CR456749 EU176427 EU176765 AF010187 BC017448 AK293882 AK315976 AK223438 AK289562 AK296571 AK299159 AK309974 BC014388 NM_004214 NM_198897	3635	-	NM_006848	5571	+	TSC_hg19_v1_chr11_+_65658143 BC008796 AK312109 U63825 AB464503 CU679113	5874	+	BC048255|CTSW|1521|cathepsin W##NM_001335|CTSW|1521|cathepsin W##BC035637|CTSW|1521|cathepsin W##AF013611|CTSW|1521|cathepsin W##AY358899|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AK075453|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AK315181|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AB030655|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AF109121|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AK000980|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AK292079|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##BC010456|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##BC018871|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##NM_016938|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##BC109225|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AF171944|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF171945|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF171946|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF250391|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##CR456749|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##EU176427|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##EU176765|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF010187|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##BC017448|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK293882|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK315976|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK223438|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK289562|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK296571|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK299159|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK309974|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##BC014388|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##NM_004214|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##NM_198897|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##NM_006848|CCDC85B|11007|coiled-coil domain containing 85B##BC008796|CCDC85B|11007|coiled-coil domain containing 85B##AK312109|CCDC85B|11007|coiled-coil domain containing 85B##U63825|CCDC85B|11007|coiled-coil domain containing 85B	1.991049	CTCF.p2:5:0.999	CTCF.p2:-14:0.992
chr12	13365133	13365259	reg1004595.p1	14.062	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-15467	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-15479	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-15558	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	767790	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	1153439	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	1173076	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.835764	CTCF.p2:6:0.836
chr21	34572211	34572336	reg1002621.p1	14.062	+	TSC_hg19_v1_chr21_+_34444006 BC011252	-128228	+	TSC_hg19_v1_chr21_+_34442554 AB463154 DQ896828 BC026989	-129712	+	TSC_hg19_v1_chr21_+_34442446 BC033290 NM_138983 AL834450 AB209791	-129821	+	BC002793 NM_000874 NM_207584 NM_207585 TSC_hg19_v1_chr21_+_34602236	29947	+	TSC_hg19_v1_chr21_+_34602281 L41942 L41944	30006	+	TSC_hg19_v1_chr21_+_34602305 BC013156 X77722 X89814 U29584	30129	+	BC011252|OLIG1|116448|oligodendrocyte transcription factor 1##DQ896828|OLIG1|116448|oligodendrocyte transcription factor 1##BC026989|OLIG1|116448|oligodendrocyte transcription factor 1##BC033290|OLIG1|116448|oligodendrocyte transcription factor 1##NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1##AL834450|OLIG1|116448|oligodendrocyte transcription factor 1##AB209791|OLIG1|116448|oligodendrocyte transcription factor 1##BC002793|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_000874|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207585|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41942|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41944|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##BC013156|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X77722|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X89814|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##U29584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2	0.852798	CTCF.p2:-14:0.853
chr10	49571704	49571845	reg1004766.p1	14.061	+	TSC_hg19_v1_chr10_+_49514722 AK292523	-56988	+	CR749241 NM_001018071	-88848	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	-363953	-	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	37898	+	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	241313	-	TSC_hg19_v1_chr10_-_49864302 AK055937	292531	-	AK292523|MAPK8|5599|mitogen-activated protein kinase 8##CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22##AK055937|ARHGAP22|58504|Rho GTPase activating protein 22	0.707913	CTCF.p2:-24:0.708
chr11	60542973	60543116	reg1002010.p1	14.061	+	NM_001098835 NM_152717 AK300233 BC031610 AK091846 AX747218 AY584608 AY584609	-18635	+	AF237905 NM_031457 AK310969 AK310884 AK315901 BC022895 AK308413 AF350504 AK310872	-75912	+	AY324188 AY324189 AY324190 NM_001012417 NM_001100909 BC140799 BC171746	-260096	+	AK122633 NM_206893 BC137259 BC137263	9801	+	NM_024098 TSC_hg19_v1_chr11_+_60609543 AK025974 AK302329 AK123775 BC001378 DQ892603 DQ895844 DQ501251	66477	+	AF144308 AK291371 AK313849 TSC_hg19_v1_chr11_-_60623424 AB008535 NM_004778	80388	-	NM_001098835|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##NM_152717|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK300233|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##BC031610|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK091846|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584608|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584609|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AF237905|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_031457|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310969|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310884|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK315901|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##BC022895|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK308413|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AF350504|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310872|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AY324188|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324189|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324190|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001012417|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001100909|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC140799|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC171746|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AK122633|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_206893|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137259|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137263|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_024098|CCDC86|79080|coiled-coil domain containing 86##AK025974|CCDC86|79080|coiled-coil domain containing 86##AK302329|CCDC86|79080|coiled-coil domain containing 86##AK123775|CCDC86|79080|coiled-coil domain containing 86##BC001378|CCDC86|79080|coiled-coil domain containing 86##DQ892603|CCDC86|79080|coiled-coil domain containing 86##DQ895844|CCDC86|79080|coiled-coil domain containing 86##DQ501251|CCDC86|79080|coiled-coil domain containing 86##AF144308|PTGDR2|11251|prostaglandin D2 receptor 2##AK291371|PTGDR2|11251|prostaglandin D2 receptor 2##AK313849|PTGDR2|11251|prostaglandin D2 receptor 2##AB008535|PTGDR2|11251|prostaglandin D2 receptor 2##NM_004778|PTGDR2|11251|prostaglandin D2 receptor 2	0.998129	CTCF.p2:-37:0.998
chr10	30880239	30880377	reg1004868.p1	14.059	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-157187	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-157369	+	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	-242075	-	AF139543 BC066294 NM_183058	38327	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	408144	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	440513	-	AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438	0.998233	CTCF.p2:8:0.998
chr10	70764701	70764834	reg1003746.p1	14.059	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-16232	+	BC104671 NM_004728 TSC_hg19_v1_chr10_+_70715925 BC009432 U41387 AK315585 BC008071 BC004182 BC017228 AB527408 CU675917	-48835	+	TSC_hg19_v1_chr10_+_70661097 CU674120 DQ892547 DQ895758	-103650	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	83069	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	83117	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	119124	+	NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##BC104671|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##NM_004728|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC009432|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##U41387|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##AK315585|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC008071|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC004182|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC017228|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##DQ892547|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##DQ895758|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##NM_002727|SRGN|5552|serglycin##D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.946459	CTCF.p2:-25:0.946
chr1	40781061	40781209	reg1003718.p1	14.059	+	TSC_hg19_v1_chr1_+_40735749 AK027874	-45372	+	TSC_hg19_v1_chr1_+_40723926 EU176257 EU176564	-57198	+	TSC_hg19_v1_chr1_+_40723907 Y13834	-57227	+	M95610 AB590601 TSC_hg19_v1_chr1_-_40782905	1730	-	TSC_hg19_v1_chr1_-_40782958 BC136326 BC136327 NM_001852	1808	-	TSC_hg19_v1_chr1_-_40782992 BC041479	1885	-	AK027874|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##EU176257|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##EU176564|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##Y13834|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##M95610|COL9A2|1298|collagen, type IX, alpha 2##BC136326|COL9A2|1298|collagen, type IX, alpha 2##BC136327|COL9A2|1298|collagen, type IX, alpha 2##NM_001852|COL9A2|1298|collagen, type IX, alpha 2##BC041479|COL9A2|1298|collagen, type IX, alpha 2	0.129679	
chr3	55519272	55519369	reg1000857.p1	14.059	+	AK290869 TSC_hg19_v1_chr3_-_55515412	-3912	-	TSC_hg19_v1_chr3_-_55515377 L20861	-3945	-	TSC_hg19_v1_chr3_-_55514935 CU687936 AB590996 BC074783	-4376	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	2012	-	TSC_hg19_v1_chr3_-_55521567 AK090582	2298	-	BC111550 BC112391 AB002376 NM_015576	983057	-	AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##L20861|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2	0.991541	CTCF.p2:-27:0.992
chr5	153990011	153990122	reg1002131.p1	14.059	+	TSC_hg19_v1_chr5_-_153857823 AF061756 NM_004821	-132244	-	TSC_hg19_v1_chr5_-_153857790 BC021190	-132278	-	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	-164456	+	BC001460 NM_015315 CU674716	102407	+	TSC_hg19_v1_chr5_+_154134891 AB018274	144829	+	TSC_hg19_v1_chr5_+_154135038 AK091465 AX747001	145015	+	AF061756|HAND1|9421|heart and neural crest derivatives expressed 1##NM_004821|HAND1|9421|heart and neural crest derivatives expressed 1##BC021190|HAND1|9421|heart and neural crest derivatives expressed 1##AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like##BC001460|LARP1|23367|La ribonucleoprotein domain family, member 1##NM_015315|LARP1|23367|La ribonucleoprotein domain family, member 1##AB018274|LARP1|23367|La ribonucleoprotein domain family, member 1##AK091465|LARP1|23367|La ribonucleoprotein domain family, member 1	0.685054	CTCF.p2:15:0.685
chr7	73226151	73226279	reg1004391.p1	14.059	+	TSC_hg19_v1_chr7_-_73184607 AB000714 BC009083 BC016056 AK313276 NM_001306	-41644	-	TSC_hg19_v1_chr7_-_73153173 BC008251 AF412030 AF412031 AF412032 AY053499 AY053500 NM_001145364 NM_148912 NM_148913	-73034	-	AF217971 BC011712 TSC_hg19_v1_chr7_-_73153133 BC067750	-73093	-	NM_001305 TSC_hg19_v1_chr7_+_73245327 AK026651 AK124076 BC000671 AB000712	19056	+	TSC_hg19_v1_chr7_-_73256847 AK301597 AF534110 NM_152559 AY354928	30647	-	AY372053 BC030643 NM_182504 GQ129394 GQ129395 AY372054	49309	+	AB000714|CLDN3|1365|claudin 3##BC009083|CLDN3|1365|claudin 3##BC016056|CLDN3|1365|claudin 3##AK313276|CLDN3|1365|claudin 3##NM_001306|CLDN3|1365|claudin 3##BC008251|ABHD11|83451|abhydrolase domain containing 11##AF412030|ABHD11|83451|abhydrolase domain containing 11##AF412031|ABHD11|83451|abhydrolase domain containing 11##AF412032|ABHD11|83451|abhydrolase domain containing 11##AY053499|ABHD11|83451|abhydrolase domain containing 11##AY053500|ABHD11|83451|abhydrolase domain containing 11##NM_001145364|ABHD11|83451|abhydrolase domain containing 11##NM_148912|ABHD11|83451|abhydrolase domain containing 11##NM_148913|ABHD11|83451|abhydrolase domain containing 11##AF217971|ABHD11|83451|abhydrolase domain containing 11##BC011712|ABHD11|83451|abhydrolase domain containing 11##BC067750|ABHD11|83451|abhydrolase domain containing 11##NM_001305|CLDN4|1364|claudin 4##AK026651|CLDN4|1364|claudin 4##AK124076|CLDN4|1364|claudin 4##BC000671|CLDN4|1364|claudin 4##AB000712|CLDN4|1364|claudin 4##AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AY372053|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##BC030643|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##NM_182504|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129394|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129395|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##AY372054|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28	0.0	
chr11	65479326	65479457	reg1003275.p1	14.058	+	TSC_hg19_v1_chr11_-_65430567 U88316	-48834	-	TSC_hg19_v1_chr11_-_65430427 NM_001145138 NM_001243984 NM_001243985 NM_021975	-48950	-	TSC_hg19_v1_chr11_-_65430388 BC033522 BC011603 BC110830 BC014095 M62399 BC069248 AK308020 AK308478 AK303262	-49077	-	NM_001206833 NM_006388 NM_182709 NM_182710 AK313297 U74667 AK225100 AK226002	106	+	BC117167 BC143290 BC143296 BC093032 TSC_hg19_v1_chr11_+_65479722 AK304664 BC064912 U67734 AB463743 HQ258620 BC013211 BC000166 U40989	384	+	TSC_hg19_v1_chr11_-_65487976 L08647	8578	-	NM_001145138|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##NM_001243984|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##NM_001243985|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##NM_021975|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##BC033522|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##BC011603|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##BC110830|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##BC014095|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##M62399|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##BC069248|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##AK308020|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##AK308478|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##AK303262|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##NM_001206833|KAT5|10524|K(lysine) acetyltransferase 5##NM_006388|KAT5|10524|K(lysine) acetyltransferase 5##NM_182709|KAT5|10524|K(lysine) acetyltransferase 5##NM_182710|KAT5|10524|K(lysine) acetyltransferase 5##AK313297|KAT5|10524|K(lysine) acetyltransferase 5##U74667|KAT5|10524|K(lysine) acetyltransferase 5##AK225100|KAT5|10524|K(lysine) acetyltransferase 5##AK226002|KAT5|10524|K(lysine) acetyltransferase 5##BC117167|KAT5|10524|K(lysine) acetyltransferase 5##BC143290|KAT5|10524|K(lysine) acetyltransferase 5##BC143296|KAT5|10524|K(lysine) acetyltransferase 5##BC093032|KAT5|10524|K(lysine) acetyltransferase 5##AK304664|KAT5|10524|K(lysine) acetyltransferase 5##BC064912|KAT5|10524|K(lysine) acetyltransferase 5##U67734|KAT5|10524|K(lysine) acetyltransferase 5##HQ258620|KAT5|10524|K(lysine) acetyltransferase 5##BC013211|KAT5|10524|K(lysine) acetyltransferase 5##BC000166|KAT5|10524|K(lysine) acetyltransferase 5##U40989|KAT5|10524|K(lysine) acetyltransferase 5##L08647|RNASEH2C|84153|ribonuclease H2, subunit C	0.015387	
chr7	56072646	56072766	reg1004180.p1	14.058	+	TSC_hg19_v1_chr7_+_56032277 NM_001202469 NM_001483 AK097049 AK315648 BC030821 AF029786 BC000732 BC001837 AJ001259 AB528140 AM392838 BT007112 CR407612 CU674374 DQ892309 DQ895508	-40289	+	TSC_hg19_v1_chr7_+_56019577 AK026553 BC047445 AF077035 NM_015969 BC054031	-53125	+	AK097282 NM_182633 AB464411	-92358	+	TSC_hg19_v1_chr7_-_56101850 AK315235	29145	-	BC063614 BX537439 TSC_hg19_v1_chr7_-_56119246 AK054677 NM_004577 BC052958	46503	-	NM_001009186 NM_001762 TSC_hg19_v1_chr7_+_56119432 AB063318	46700	+	NM_001202469|GBAS|2631|glioblastoma amplified sequence##NM_001483|GBAS|2631|glioblastoma amplified sequence##AK097049|GBAS|2631|glioblastoma amplified sequence##AK315648|GBAS|2631|glioblastoma amplified sequence##BC030821|GBAS|2631|glioblastoma amplified sequence##AF029786|GBAS|2631|glioblastoma amplified sequence##BC000732|GBAS|2631|glioblastoma amplified sequence##BC001837|GBAS|2631|glioblastoma amplified sequence##AJ001259|GBAS|2631|glioblastoma amplified sequence##AM392838|GBAS|2631|glioblastoma amplified sequence##BT007112|GBAS|2631|glioblastoma amplified sequence##CR407612|GBAS|2631|glioblastoma amplified sequence##DQ892309|GBAS|2631|glioblastoma amplified sequence##DQ895508|GBAS|2631|glioblastoma amplified sequence##AK026553|MRPS17|51373|mitochondrial ribosomal protein S17##BC047445|MRPS17|51373|mitochondrial ribosomal protein S17##AF077035|MRPS17|51373|mitochondrial ribosomal protein S17##NM_015969|MRPS17|51373|mitochondrial ribosomal protein S17##BC054031|MRPS17|51373|mitochondrial ribosomal protein S17##AK097282|ZNF713|349075|zinc finger protein 713##NM_182633|ZNF713|349075|zinc finger protein 713##AK315235|PSPH|5723|phosphoserine phosphatase##BC063614|PSPH|5723|phosphoserine phosphatase##BX537439|PSPH|5723|phosphoserine phosphatase##AK054677|PSPH|5723|phosphoserine phosphatase##NM_004577|PSPH|5723|phosphoserine phosphatase##BC052958|PSPH|5723|phosphoserine phosphatase##NM_001009186|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)##NM_001762|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)##AB063318|CCT6A|908|chaperonin containing TCP1, subunit 6A (zeta 1)	0.999435	CTCF.p2:4:0.999
chr4	16003117	16003244	reg1004109.p1	14.057	+	AF361936 CU693032 DQ892062 DQ895256 AB529223 BC025720 AB021123 AY358978 NM_031950	-38376	-	NM_005130	-62818	-	BC003628 M60047 BC008910 BC018852 AK291307 TSC_hg19_v1_chr4_-_15939972	-63220	-	NM_001145849 NM_001145850 NM_001145851 NM_001145852 NM_006017	74560	-	TSC_hg19_v1_chr4_-_16085325 AF117225	82151	-	NM_001145847 AK075411 BC012089 NM_001145848 TSC_hg19_v1_chr4_-_16085647 AK027420 AK226033	82444	-	AF361936|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ892062|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ895256|FGFBP2|83888|fibroblast growth factor binding protein 2##BC025720|FGFBP2|83888|fibroblast growth factor binding protein 2##AB021123|FGFBP2|83888|fibroblast growth factor binding protein 2##AY358978|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_031950|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_005130|FGFBP1|9982|fibroblast growth factor binding protein 1##BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1##M60047|FGFBP1|9982|fibroblast growth factor binding protein 1##BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1##BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1##AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1##NM_001145849|PROM1|8842|prominin 1##NM_001145850|PROM1|8842|prominin 1##NM_001145851|PROM1|8842|prominin 1##NM_001145852|PROM1|8842|prominin 1##NM_006017|PROM1|8842|prominin 1##AF117225|PROM1|8842|prominin 1##NM_001145847|PROM1|8842|prominin 1##AK075411|PROM1|8842|prominin 1##BC012089|PROM1|8842|prominin 1##NM_001145848|PROM1|8842|prominin 1##AK027420|PROM1|8842|prominin 1##AK226033|PROM1|8842|prominin 1	0.46037	CTCF.p2:18:0.460
chr10	79606511	79606647	reg1004769.p1	14.054	+	BC009695 AK098326 TSC_hg19_v1_chr10_-_79397567 BC062659 BC024965 NM_001014797 NM_001161352 NM_001161353 NM_002247	-209016	-	U13913 BC137115 BC137137 BC144496 CR627384 TSC_hg19_v1_chr10_-_79397499	-209093	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	-209173	-	TSC_hg19_v1_chr10_-_79628871 BC117695	22330	-	AB384502 NM_004747 AB011155 BC146794 TSC_hg19_v1_chr10_-_79686514	79823	-	AF021351 AY091459 AB384941 TSC_hg19_v1_chr10_-_79789272 BC041089 AK300329	182642	-	BC009695|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC062659|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC024965|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001014797|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161352|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161353|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_002247|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)##NM_004747|DLG5|9231|discs, large homolog 5 (Drosophila)##AB011155|DLG5|9231|discs, large homolog 5 (Drosophila)##BC146794|DLG5|9231|discs, large homolog 5 (Drosophila)##AF021351|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AY091459|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC041089|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AK300329|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa	0.993947	CTCF.p2:5:0.994
chr22	38039412	38039537	reg1003088.p1	14.053	+	TSC_hg19_v1_chr22_+_38035718 CR456576 AB463257 CU013175 CU013463	-3715	+	TSC_hg19_v1_chr22_+_38035696 AK301163	-3770	+	NM_018957 TSC_hg19_v1_chr22_+_38035684	-3790	+	TSC_hg19_v1_chr22_+_38054751 BC064922 NM_020315 BC000320 BC018844 AY125047	15271	+	CR456511 NM_002305 EU363770 AK312161 BC020675 TSC_hg19_v1_chr22_+_38071644 AL832117 D28452 BC001693 AB097036 J04456 X15256 X14829	32183	+	TSC_hg19_v1_chr22_+_38082360 NM_024313 AK057139 AK294700 AK316443 BC002808 AK310084 AL160132 CR456463 AB528193 CU012996 CU013284 DQ278603	42901	+	CR456576|SH3BP1|23616|SH3-domain binding protein 1##CU013175|SH3BP1|23616|SH3-domain binding protein 1##CU013463|SH3BP1|23616|SH3-domain binding protein 1##AK301163|SH3BP1|23616|SH3-domain binding protein 1##NM_018957|SH3BP1|23616|SH3-domain binding protein 1##BC064922|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##NM_020315|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##BC000320|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##BC018844|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##AY125047|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##CR456511|LGALS1|3956|lectin, galactoside-binding, soluble, 1##NM_002305|LGALS1|3956|lectin, galactoside-binding, soluble, 1##EU363770|LGALS1|3956|lectin, galactoside-binding, soluble, 1##AK312161|LGALS1|3956|lectin, galactoside-binding, soluble, 1##BC020675|LGALS1|3956|lectin, galactoside-binding, soluble, 1##AL832117|LGALS1|3956|lectin, galactoside-binding, soluble, 1##D28452|LGALS1|3956|lectin, galactoside-binding, soluble, 1##BC001693|LGALS1|3956|lectin, galactoside-binding, soluble, 1##AB097036|LGALS1|3956|lectin, galactoside-binding, soluble, 1##J04456|LGALS1|3956|lectin, galactoside-binding, soluble, 1##X15256|LGALS1|3956|lectin, galactoside-binding, soluble, 1##X14829|LGALS1|3956|lectin, galactoside-binding, soluble, 1##NM_024313|NOL12|79159|nucleolar protein 12##AK057139|NOL12|79159|nucleolar protein 12##AK294700|NOL12|79159|nucleolar protein 12##AK316443|NOL12|79159|nucleolar protein 12##BC002808|NOL12|79159|nucleolar protein 12##AL160132|NOL12|79159|nucleolar protein 12##CR456463|NOL12|79159|nucleolar protein 12	0.998875	CTCF.p2:3:0.999
chr6	83299582	83299727	reg1004873.p1	14.053	+	TSC_hg19_v1_chr6_+_83073996 AK074790 NM_001166392	-225677	+	TSC_hg19_v1_chr6_+_83073565 BC037161 AK074786	-226121	+	AK291170 NM_006670	-226732	+	TSC_hg19_v1_chr6_-_83775541 BC101512 BC101538 BC143617 BC036049 AB126062 NM_198920 BC053645 AK298205 BC057845	475871	-	TSC_hg19_v1_chr6_+_83777389 BX648667 NM_001199942 NM_015018 AK094766	477743	+	AF102265 AB032081 AF180371 TSC_hg19_v1_chr6_-_83902977 AK314512 AK225363 AK001365 AK023432 BC001258 NM_001199918 NM_001199919 NM_015599	603318	-	AK074790|TPBG|7162|trophoblast glycoprotein##NM_001166392|TPBG|7162|trophoblast glycoprotein##BC037161|TPBG|7162|trophoblast glycoprotein##AK074786|TPBG|7162|trophoblast glycoprotein##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein##BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BX648667|DOPEY1|23033|dopey family member 1##NM_001199942|DOPEY1|23033|dopey family member 1##NM_015018|DOPEY1|23033|dopey family member 1##AK094766|DOPEY1|23033|dopey family member 1##AF102265|PGM3|5238|phosphoglucomutase 3##AB032081|PGM3|5238|phosphoglucomutase 3##AF180371|PGM3|5238|phosphoglucomutase 3##AK314512|PGM3|5238|phosphoglucomutase 3##AK225363|PGM3|5238|phosphoglucomutase 3##AK001365|PGM3|5238|phosphoglucomutase 3##AK023432|PGM3|5238|phosphoglucomutase 3##BC001258|PGM3|5238|phosphoglucomutase 3##NM_001199918|PGM3|5238|phosphoglucomutase 3##NM_001199919|PGM3|5238|phosphoglucomutase 3##NM_015599|PGM3|5238|phosphoglucomutase 3	0.843763	CTCF.p2:19:0.844
chr20	62417737	62417849	reg1003261.p2	14.052	+	TSC_hg19_v1_chr20_+_62372460 AK298304 BC017446	-45273	+	TSC_hg19_v1_chr20_+_62371761 AB044786 BC001402	-46040	+	TSC_hg19_v1_chr20_+_62371629 AB044777	-46155	+	AK131482 NM_025224	19062	-	TSC_hg19_v1_chr20_-_62462618 BC052269 BC073800	44804	-	NM_080622	74772	+	AK298304|SLC2A4RG|56731|SLC2A4 regulator##BC017446|SLC2A4RG|56731|SLC2A4 regulator##AB044786|SLC2A4RG|56731|SLC2A4 regulator##BC001402|SLC2A4RG|56731|SLC2A4 regulator##AB044777|SLC2A4RG|56731|SLC2A4 regulator##AK131482|ZBTB46|140685|zinc finger and BTB domain containing 46##NM_025224|ZBTB46|140685|zinc finger and BTB domain containing 46##BC052269|ZBTB46|140685|zinc finger and BTB domain containing 46##BC073800|ZBTB46|140685|zinc finger and BTB domain containing 46##NM_080622|ABHD16B|140701|abhydrolase domain containing 16B	0.0	
chr10	121176512	121176635	reg1003347.p1	14.051	+	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-209312	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-238226	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-238270	-	NM_002925	119471	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	125617	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	179535	-	BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.97967	CTCF.p2:8:0.980
chr9	34985427	34985561	reg1004770.p1	14.050	+	AB028968 TSC_hg19_v1_chr9_+_34958324	-27171	+	TSC_hg19_v1_chr9_+_34958175 BC041169 NM_015297	-27313	+	AK301951 AK302320 NM_001141917	-255996	-	NM_001135004 NM_012266 TSC_hg19_v1_chr9_+_34989739 AK023253 BC012115 AK314671 AF087870	4223	+	AK299647 NM_001135005 TSC_hg19_v1_chr9_+_34990289	4784	+	AF088982 TSC_hg19_v1_chr9_+_34990719	5224	+	AB028968|KIAA1045|23349|KIAA1045##BC041169|KIAA1045|23349|KIAA1045##NM_015297|KIAA1045|23349|KIAA1045##AK302320|FAM205A|259308|family with sequence similarity 205, member A##NM_001141917|FAM205A|259308|family with sequence similarity 205, member A##NM_001135004|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##NM_012266|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK023253|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK314671|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AF087870|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK299647|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##NM_001135005|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AF088982|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5	0.970326	CTCF.p2:3:0.970
chr19	3545215	3545327	reg1003755.p1	14.049	+	NM_001135580	-6117	+	AB033068 NM_001136197 NM_001136198 DQ890739 AF080397 CU680596 AB013462 AB013463 AF433157 BT007115	-22301	+	TSC_hg19_v1_chr19_+_3506308 NM_016263 BC013413 AF102507 AF083810	-38956	+	DQ892284 DQ895484 CU691388 TSC_hg19_v1_chr19_-_3557547	12204	-	TSC_hg19_v1_chr19_-_3557559 BC036706	12284	-	BC094804 BC068439 NM_001042680 NM_021731 NM_174983 TSC_hg19_v1_chr19_-_3557583	12303	-	NM_001135580|C19orf71|100128569|chromosome 19 open reading frame 71##AB033068|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##NM_001136197|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##NM_001136198|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##DQ890739|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AF080397|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AB013462|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AB013463|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AF433157|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##BT007115|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##NM_016263|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##BC013413|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AF102507|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AF083810|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##DQ892284|MFSD12|126321|major facilitator superfamily domain containing 12##DQ895484|MFSD12|126321|major facilitator superfamily domain containing 12##BC036706|MFSD12|126321|major facilitator superfamily domain containing 12##BC068439|MFSD12|126321|major facilitator superfamily domain containing 12##NM_001042680|MFSD12|126321|major facilitator superfamily domain containing 12##NM_021731|MFSD12|126321|major facilitator superfamily domain containing 12##NM_174983|MFSD12|126321|major facilitator superfamily domain containing 12	0.870513	CTCF.p2:-8:0.871
chr10	81322009	81322125	reg1003962.p1	14.048	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	-1916	-	BC070048 NM_001099692	-49711	+	TSC_hg19_v1_chr10_-_81205381 AK308876 AK075279 BC053564 BC039249 BC028617 NM_153367	-116807	-	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	48637	+	BC022318 NM_003019	386793	-	TSC_hg19_v1_chr10_+_81838420 AK222536 AK023325 BC022252 NM_025125 CR457310	516369	+	BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##AK308876|ZCCHC24|219654|zinc finger, CCHC domain containing 24##AK075279|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC053564|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC039249|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC028617|ZCCHC24|219654|zinc finger, CCHC domain containing 24##NM_153367|ZCCHC24|219654|zinc finger, CCHC domain containing 24##AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1##BC022318|SFTPD|6441|surfactant protein D##NM_003019|SFTPD|6441|surfactant protein D##AK222536|FAM213A|80195|family with sequence similarity 213, member A##AK023325|FAM213A|80195|family with sequence similarity 213, member A##BC022252|FAM213A|80195|family with sequence similarity 213, member A##NM_025125|FAM213A|80195|family with sequence similarity 213, member A##CR457310|FAM213A|80195|family with sequence similarity 213, member A	1.836199	CTCF.p2:-1:0.976	CTCF.p2:77:0.860
chr13	74861176	74861300	reg1004620.p1	14.047	+	TSC_hg19_v1_chr13_-_74708425 AK291397	-152842	-	AF161471 AF113122 NM_007249	-153249	-	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-1228034	+	CR749622 TSC_hg19_v1_chr13_-_75901948	1040684	-	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	1195100	-	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	1250740	-	AK291397|KLF12|11278|Kruppel-like factor 12##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##CR749622|TBC1D4|9882|TBC1 domain family, member 4##AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6	0.978235	CTCF.p2:0:0.978
chr5	139624179	139624299	reg1003147.p1	14.047	+	TSC_hg19_v1_chr5_+_139554722 BC023982 BC013643 AK225992 AK311640 AK312045 AJ245877	-69468	+	TSC_hg19_v1_chr5_+_139554672 NM_032412	-69585	+	BC041380 NM_001007189	-118720	+	AB464063 TSC_hg19_v1_chr5_-_139682672	58425	-	AK315353 TSC_hg19_v1_chr5_-_139682676	58436	-	TSC_hg19_v1_chr5_-_139682680 BC011869 BC003620 BC006202 AK223394 NM_002622	58445	-	BC023982|C5orf32|84418|chromosome 5 open reading frame 32##BC013643|C5orf32|84418|chromosome 5 open reading frame 32##AK225992|C5orf32|84418|chromosome 5 open reading frame 32##AK312045|C5orf32|84418|chromosome 5 open reading frame 32##AJ245877|C5orf32|84418|chromosome 5 open reading frame 32##NM_032412|C5orf32|84418|chromosome 5 open reading frame 32##BC041380|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##NM_001007189|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##AK315353|PFDN1|5201|prefoldin subunit 1##BC011869|PFDN1|5201|prefoldin subunit 1##BC003620|PFDN1|5201|prefoldin subunit 1##BC006202|PFDN1|5201|prefoldin subunit 1##AK223394|PFDN1|5201|prefoldin subunit 1##NM_002622|PFDN1|5201|prefoldin subunit 1	1.325869	CTCF.p2:-11:0.990	CTCF.p2:33:0.336
chr10	103540971	103541085	reg1003253.p2	14.046	+	NM_001206389	-903	-	AB014615 U36223 U46211 U46212 U46213 U56978 BC069106 BC128235 BC128236 NM_006119 NM_033163 NM_033164 NM_033165	-5321	-	TSC_hg19_v1_chr10_-_103454921 AF281859	-86066	-	CU691104 BC041067 TSC_hg19_v1_chr10_-_103543153 BC054868	2122	-	TSC_hg19_v1_chr10_-_103543157 AF081280 AY049737 NM_006993	2143	-	AB014579 TSC_hg19_v1_chr10_-_103577919	36837	-	NM_001206389|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##AB014615|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U36223|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46211|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46212|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46213|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U56978|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC069106|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC128235|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC128236|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_006119|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033163|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033164|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033165|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##AF281859|FBXW4|6468|F-box and WD repeat domain containing 4##BC041067|NPM3|10360|nucleophosmin/nucleoplasmin 3##BC054868|NPM3|10360|nucleophosmin/nucleoplasmin 3##AF081280|NPM3|10360|nucleophosmin/nucleoplasmin 3##AY049737|NPM3|10360|nucleophosmin/nucleoplasmin 3##NM_006993|NPM3|10360|nucleophosmin/nucleoplasmin 3##AB014579|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)	0.99309	CTCF.p2:1:0.993
chr9	112006948	112007061	reg1004071.p1	14.046	+	TSC_hg19_v1_chr9_-_111929489 AF155065 NM_014334	-77475	-	TSC_hg19_v1_chr9_-_111882212 BC142984 AF153415 NM_032012	-124784	-	TSC_hg19_v1_chr9_-_111882206 AK299952	-124799	-	TSC_hg19_v1_chr9_-_112083007 AF153416 AF153418 NM_018424 NM_019114	76008	-	TSC_hg19_v1_chr9_-_112083330 AB032179	76286	-	AK296265 AK296388 AK316118 NM_001145371 NM_001145372	184209	-	AF155065|C9orf4|23732|chromosome 9 open reading frame 4##NM_014334|C9orf4|23732|chromosome 9 open reading frame 4##AF153415|C9orf5|23731|chromosome 9 open reading frame 5##NM_032012|C9orf5|23731|chromosome 9 open reading frame 5##AK299952|C9orf5|23731|chromosome 9 open reading frame 5##AF153416|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF153418|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_018424|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_019114|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AB032179|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	0.998793	CTCF.p2:-3:0.999
chr2	38501866	38502012	reg1004099.p1	14.045	+	TSC_hg19_v1_chr2_-_38303315 AK312686 NM_000104	-198619	-	U03688 BC012049 TSC_hg19_v1_chr2_-_38303294 AK297039 AK303862	-198657	-	NM_001170793 NM_144713 AK057516 AF435956	-324339	+	AK316179 TSC_hg19_v1_chr2_-_38525609	23630	-	TSC_hg19_v1_chr2_-_38604411 BC053508 AK026946 AK225190 AK303985 AK308894	102465	-	TSC_hg19_v1_chr2_-_38604430 NM_001135673 NM_022374	102492	-	AK312686|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_000104|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##U03688|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##BC012049|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK303862|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1##AK316179|ATL2|64225|atlastin GTPase 2##BC053508|ATL2|64225|atlastin GTPase 2##AK026946|ATL2|64225|atlastin GTPase 2##AK225190|ATL2|64225|atlastin GTPase 2##AK303985|ATL2|64225|atlastin GTPase 2##AK308894|ATL2|64225|atlastin GTPase 2##NM_001135673|ATL2|64225|atlastin GTPase 2##NM_022374|ATL2|64225|atlastin GTPase 2	0.420209	CTCF.p2:20:0.420
chr1	204131738	204131867	reg1004816.p1	14.044	+	TSC_hg19_v1_chr1_-_204121144 NM_018208	-10577	-	AB073608 AK302145 CU679603 AK293426 AK001623 TSC_hg19_v1_chr1_-_204121116 BC010082	-10783	-	TSC_hg19_v1_chr1_+_204042242 BC106038 AK304801 BC040649 NM_005686	-89541	+	CR536498 AB464139 CU690486 BC033474 BC047752 NM_000537	3640	-	AF218017 BC022819 AK291695 NM_002256 TSC_hg19_v1_chr1_-_204165620	33779	-	CU691306 TSC_hg19_v1_chr1_-_204183117 AB075871 BC058832 AK124645 NM_198447	51325	-	NM_018208|ETNK2|55224|ethanolamine kinase 2##AB073608|ETNK2|55224|ethanolamine kinase 2##AK302145|ETNK2|55224|ethanolamine kinase 2##AK293426|ETNK2|55224|ethanolamine kinase 2##AK001623|ETNK2|55224|ethanolamine kinase 2##BC010082|ETNK2|55224|ethanolamine kinase 2##BC106038|SOX13|9580|SRY (sex determining region Y)-box 13##AK304801|SOX13|9580|SRY (sex determining region Y)-box 13##BC040649|SOX13|9580|SRY (sex determining region Y)-box 13##NM_005686|SOX13|9580|SRY (sex determining region Y)-box 13##CR536498|REN|5972|renin##BC033474|REN|5972|renin##BC047752|REN|5972|renin##NM_000537|REN|5972|renin##AF218017|KISS1|3814|KiSS-1 metastasis-suppressor##BC022819|KISS1|3814|KiSS-1 metastasis-suppressor##AK291695|KISS1|3814|KiSS-1 metastasis-suppressor##NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor##AB075871|GOLT1A|127845|golgi transport 1A##BC058832|GOLT1A|127845|golgi transport 1A##AK124645|GOLT1A|127845|golgi transport 1A##NM_198447|GOLT1A|127845|golgi transport 1A	0.993829	CTCF.p2:0:0.994
chr14	36843369	36843491	reg1003826.p1	14.043	+	AB463855 CU677729 BX248287 TSC_hg19_v1_chr14_-_36789806 AF208857 BC016821 AK293473 BC005197 AB038523 AK315290 NM_001144891 NM_016586	-53586	-	TSC_hg19_v1_chr14_+_36295599 NM_032352 AY827074 BC006250 AK297106 AK310359 AK315424	-547827	+	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	-565035	-	TSC_hg19_v1_chr14_-_36982983 BC042093 NM_001101341	139552	-	NM_003317 U33749	145472	-	BT009773 DQ892964 DQ896211 D50740 BC006221 U43203 NM_001079668	145951	-	BX248287|MBIP|51562|MAP3K12 binding inhibitory protein 1##AF208857|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC016821|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK293473|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC005197|MBIP|51562|MAP3K12 binding inhibitory protein 1##AB038523|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK315290|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_001144891|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_016586|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC042093|SFTA3|253970|surfactant associated 3##NM_001101341|SFTA3|253970|surfactant associated 3##NM_003317|NKX2-1|7080|NK2 homeobox 1##U33749|NKX2-1|7080|NK2 homeobox 1##BT009773|NKX2-1|7080|NK2 homeobox 1##DQ892964|NKX2-1|7080|NK2 homeobox 1##DQ896211|NKX2-1|7080|NK2 homeobox 1##D50740|NKX2-1|7080|NK2 homeobox 1##BC006221|NKX2-1|7080|NK2 homeobox 1##U43203|NKX2-1|7080|NK2 homeobox 1##NM_001079668|NKX2-1|7080|NK2 homeobox 1	0.999703	CTCF.p2:0:1.000
chr2	190277222	190277324	reg1002945.p2	14.043	+	AB384824 J04478 Y14690 AB209045 BC086874 AK297936 TSC_hg19_v1_chr2_-_190044488 AK300146 M31365 NM_000393	-232806	-	TSC_hg19_v1_chr2_+_189839133 AB384877 X07240	-438100	+	X14420 BX649097 TSC_hg19_v1_chr2_+_189839117	-438155	+	BC040567 NM_032168 TSC_hg19_v1_chr2_+_190306177	28897	+	TSC_hg19_v1_chr2_+_190306204 AK022607 AK290445 CR749440 AK022581 AK091546 AX747050	28936	+	AF171087 AF215636 AF226614 AF231121 AL136944 BC035893 TSC_hg19_v1_chr2_-_190445510 AK223236 AK292146 AK314827	168216	-	J04478|COL5A2|1290|collagen, type V, alpha 2##Y14690|COL5A2|1290|collagen, type V, alpha 2##AB209045|COL5A2|1290|collagen, type V, alpha 2##BC086874|COL5A2|1290|collagen, type V, alpha 2##AK297936|COL5A2|1290|collagen, type V, alpha 2##AK300146|COL5A2|1290|collagen, type V, alpha 2##M31365|COL5A2|1290|collagen, type V, alpha 2##NM_000393|COL5A2|1290|collagen, type V, alpha 2##X07240|COL3A1|1281|collagen, type III, alpha 1##X14420|COL3A1|1281|collagen, type III, alpha 1##BC040567|WDR75|84128|WD repeat domain 75##NM_032168|WDR75|84128|WD repeat domain 75##AK022607|WDR75|84128|WD repeat domain 75##AK290445|WDR75|84128|WD repeat domain 75##CR749440|WDR75|84128|WD repeat domain 75##AK022581|WDR75|84128|WD repeat domain 75##AK091546|WDR75|84128|WD repeat domain 75##AF171087|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF215636|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF226614|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF231121|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AL136944|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##BC035893|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK223236|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK292146|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK314827|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1	0.878782	CTCF.p2:1:0.879
chr8	37637490	37637617	reg1004061.p1	14.043	+	TSC_hg19_v1_chr8_+_37620162 AK291135 CR533532 EU831636 EU831720	-17377	+	TSC_hg19_v1_chr8_+_37620124 AL136616	-17431	+	NM_007198 TSC_hg19_v1_chr8_+_37620111 BC012334 AK021923	-17444	+	TSC_hg19_v1_chr8_+_37654400 AK027296 NM_032777	16846	+	TSC_hg19_v1_chr8_+_37654406 AB040964 BC146774 AY090637	16872	+	TSC_hg19_v1_chr8_+_37654778 AF378755 AB385479 AY181242	17229	+	AK291135|PROSC|11212|proline synthetase co-transcribed homolog (bacterial)##CR533532|PROSC|11212|proline synthetase co-transcribed homolog (bacterial)##EU831636|PROSC|11212|proline synthetase co-transcribed homolog (bacterial)##EU831720|PROSC|11212|proline synthetase co-transcribed homolog (bacterial)##AL136616|PROSC|11212|proline synthetase co-transcribed homolog (bacterial)##NM_007198|PROSC|11212|proline synthetase co-transcribed homolog (bacterial)##BC012334|PROSC|11212|proline synthetase co-transcribed homolog (bacterial)##AK021923|PROSC|11212|proline synthetase co-transcribed homolog (bacterial)##AK027296|GPR124|25960|G protein-coupled receptor 124##NM_032777|GPR124|25960|G protein-coupled receptor 124##AB040964|GPR124|25960|G protein-coupled receptor 124##BC146774|GPR124|25960|G protein-coupled receptor 124##AY090637|GPR124|25960|G protein-coupled receptor 124##AF378755|GPR124|25960|G protein-coupled receptor 124##AY181242|GPR124|25960|G protein-coupled receptor 124	0.986058	CTCF.p2:-26:0.986
chr19	12252081	12252195	reg1002628.p3	14.040	+	AL080125 AK023094 BC036714 TSC_hg19_v1_chr19_-_12251166 NM_001203250 NM_021143	-982	-	AK128700 TSC_hg19_v1_chr19_+_12203111 AK124155	-49025	+	AK299732 AL832297 AK098117 NM_001136501 BC125185 BC125186 TSC_hg19_v1_chr19_+_12175767	-76498	+	BC007868 AK096560 AK292455 NM_145233 TSC_hg19_v1_chr19_-_12267555	15408	-	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	21771	+	AK023304 TSC_hg19_v1_chr19_+_12305836	53695	+	AL080125|ZNF20|7568|zinc finger protein 20##AK023094|ZNF20|7568|zinc finger protein 20##BC036714|ZNF20|7568|zinc finger protein 20##NM_001203250|ZNF20|7568|zinc finger protein 20##NM_021143|ZNF20|7568|zinc finger protein 20##AK128700|ZNF788|388507|zinc finger family member 788##AK299732|ZNF844|284391|zinc finger protein 844##AL832297|ZNF844|284391|zinc finger protein 844##AK098117|ZNF844|284391|zinc finger protein 844##NM_001136501|ZNF844|284391|zinc finger protein 844##BC125185|ZNF844|284391|zinc finger protein 844##BC125186|ZNF844|284391|zinc finger protein 844##BC007868|ZNF625|90589|zinc finger protein 625##AK096560|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##AK292455|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##NM_145233|ZNF625|90589|zinc finger protein 625##NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136##AK023304|LOC100289333|100289333|uncharacterized LOC100289333	0.997605	CTCF.p2:7:0.998
chr20	3034636	3034745	reg1003677.p1	14.040	+	TSC_hg19_v1_chr20_+_3026675 NM_030811 BC013018 AF308301	-7996	+	AF036330 NM_001501 NM_178331 NM_178332 BC069362 BC115399 BC115400	-10423	+	TSC_hg19_v1_chr20_+_2944935 CU693258 DQ891155 DQ894334	-89764	+	BC069144 NM_000915 BC101841 BC101843 M25650 AB463993 M62611	17629	+	X03173 TSC_hg19_v1_chr20_+_3052956	18207	+	AF031476 M25647 X03172 BC126196 BC126224 BC018062 NM_000490	30662	-	NM_030811|MRPS26|64949|mitochondrial ribosomal protein S26##BC013018|MRPS26|64949|mitochondrial ribosomal protein S26##AF308301|MRPS26|64949|mitochondrial ribosomal protein S26##AF036330|GNRH2|2797|gonadotropin-releasing hormone 2##NM_001501|GNRH2|2797|gonadotropin-releasing hormone 2##NM_178331|GNRH2|2797|gonadotropin-releasing hormone 2##NM_178332|GNRH2|2797|gonadotropin-releasing hormone 2##BC069362|GNRH2|2797|gonadotropin-releasing hormone 2##BC115399|GNRH2|2797|gonadotropin-releasing hormone 2##BC115400|GNRH2|2797|gonadotropin-releasing hormone 2##DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BC069144|OXT|5020|oxytocin, prepropeptide##NM_000915|OXT|5020|oxytocin, prepropeptide##BC101841|OXT|5020|oxytocin, prepropeptide##BC101843|OXT|5020|oxytocin, prepropeptide##M25650|OXT|5020|oxytocin, prepropeptide##M62611|OXT|5020|oxytocin, prepropeptide##X03173|OXT|5020|oxytocin, prepropeptide##AF031476|AVP|551|arginine vasopressin##M25647|AVP|551|arginine vasopressin##X03172|AVP|551|arginine vasopressin##BC126196|AVP|551|arginine vasopressin##BC126224|AVP|551|arginine vasopressin##BC018062|AVP|551|arginine vasopressin##NM_000490|AVP|551|arginine vasopressin	0.9966	CTCF.p2:0:0.997
chr22	45974020	45974142	reg1004080.p1	14.040	+	TSC_hg19_v1_chr22_+_45898762 NM_001996 NM_006485 NM_006486 NM_006487 AK075566 AK075460 AK300806 AK316291 BC022497 AF217999 AF126110 U01244 X53741 X53742 X53743 AB528743 DQ894047	-75305	+	TSC_hg19_v1_chr22_+_45809599 BC003024 BC009904 AL442116	-164453	+	TSC_hg19_v1_chr22_+_45809579 AK098586 NM_015653 AK225722	-164512	+	NM_001167621 NM_013236 AK294348 TSC_hg19_v1_chr22_+_46067713	93614	+	TSC_hg19_v1_chr22_+_46067733 AF086923 AL050282	93648	+	AK025734 TSC_hg19_v1_chr22_+_46067746 AF119662 BC007508	93675	+	NM_001996|FBLN1|2192|fibulin 1##NM_006485|FBLN1|2192|fibulin 1##NM_006486|FBLN1|2192|fibulin 1##NM_006487|FBLN1|2192|fibulin 1##AK075566|FBLN1|2192|fibulin 1##AK075460|FBLN1|2192|fibulin 1##AK300806|FBLN1|2192|fibulin 1##AK316291|FBLN1|2192|fibulin 1##BC022497|FBLN1|2192|fibulin 1##AF217999|FBLN1|2192|fibulin 1##AF126110|FBLN1|2192|fibulin 1##U01244|FBLN1|2192|fibulin 1##X53741|FBLN1|2192|fibulin 1##X53742|FBLN1|2192|fibulin 1##X53743|FBLN1|2192|fibulin 1##DQ894047|FBLN1|2192|fibulin 1##BC003024|RIBC2|26150|RIB43A domain with coiled-coils 2##BC009904|RIBC2|26150|RIB43A domain with coiled-coils 2##AL442116|RIBC2|26150|RIB43A domain with coiled-coils 2##AK098586|RIBC2|26150|RIB43A domain with coiled-coils 2##NM_015653|RIBC2|26150|RIB43A domain with coiled-coils 2##AK225722|RIBC2|26150|RIB43A domain with coiled-coils 2##NM_001167621|ATXN10|25814|ataxin 10##NM_013236|ATXN10|25814|ataxin 10##AK294348|ATXN10|25814|ataxin 10##AF086923|ATXN10|25814|ataxin 10##AL050282|ATXN10|25814|ataxin 10##AK025734|ATXN10|25814|ataxin 10##AF119662|ATXN10|25814|ataxin 10##BC007508|ATXN10|25814|ataxin 10	0.998913	CTCF.p2:-16:0.999
chr16	31870817	31870951	reg1003664.p1	14.039	+	TSC_hg19_v1_chr16_+_31724584 AK299345 AK128671 BC018134 AX721120	-146283	+	TSC_hg19_v1_chr16_+_31724564 AL832197	-146319	+	TSC_hg19_v1_chr16_+_31724557 NM_001130913 BC055408	-146338	+	TSC_hg19_v1_chr16_+_31885098 NM_003414	14203	+	TSC_hg19_v1_chr16_+_31885114 AK096390	14232	+	AF220492 TSC_hg19_v1_chr16_+_31885131	14248	+	AK128671|ZNF720|124411|zinc finger protein 720##BC018134|ZNF720|124411|zinc finger protein 720##AL832197|ZNF720|124411|zinc finger protein 720##NM_001130913|ZNF720|124411|zinc finger protein 720##BC055408|ZNF720|124411|zinc finger protein 720##NM_003414|ZNF267|10308|zinc finger protein 267##AK096390|ZNF267|10308|zinc finger protein 267##AF220492|ZNF267|10308|zinc finger protein 267	0.694154	CTCF.p2:-11:0.694
chr22	23520777	23520886	reg1002713.p1	14.039	+	AB023061 NM_004914 BC104989 BC104991 CR456553 AF133588 AB527204 AY336745 CU013153 CU013441 AK296052 TSC_hg19_v1_chr22_+_23487674	-33227	+	BC008986 AF133587 NM_014433 AK299530 AK310327	-36588	-	AK312519 TSC_hg19_v1_chr22_+_23412728 AK293653	-108102	+	NM_004327 NM_021574 Y00661 TSC_hg19_v1_chr22_+_23522690	1789	+	TSC_hg19_v1_chr22_+_23522713 BC066122	1882	+	TSC_hg19_v1_chr22_+_23522745 AB209991	1969	+	AB023061|RAB36|9609|RAB36, member RAS oncogene family##NM_004914|RAB36|9609|RAB36, member RAS oncogene family##BC104989|RAB36|9609|RAB36, member RAS oncogene family##BC104991|RAB36|9609|RAB36, member RAS oncogene family##CR456553|RAB36|9609|RAB36, member RAS oncogene family##AF133588|RAB36|9609|RAB36, member RAS oncogene family##AY336745|RAB36|9609|RAB36, member RAS oncogene family##CU013153|RAB36|9609|RAB36, member RAS oncogene family##CU013441|RAB36|9609|RAB36, member RAS oncogene family##AK296052|RAB36|9609|RAB36, member RAS oncogene family##BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1##AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1##NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK312519|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK293653|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##NM_004327|BCR|613|breakpoint cluster region##NM_021574|BCR|613|breakpoint cluster region##Y00661|BCR|613|breakpoint cluster region##BC066122|BCR|613|breakpoint cluster region##AB209991|BCR|613|breakpoint cluster region	0.996925	CTCF.p2:-22:0.997
chr1	225039298	225039418	reg1002853.p1	14.038	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-235179	+	AB209887 NM_001115113 NM_025160	-417358	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-417598	-	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	78007	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	576371	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	576443	-	AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor	1.014068	CTCF.p2:13:1.000
chr13	51375592	51375720	reg1002894.p2	14.038	+	AJ412041 AJ412042 AJ412043 TSC_hg19_v1_chr13_+_50760088	-615603	+	TSC_hg19_v1_chr13_-_50699781 AF380424	-675841	-	AJ412023 AJ412024 AJ412025 AJ412026 AJ412038 AJ412039 AJ412054 AJ412055 AJ412056 AJ412057 AJ412058 AJ412059 AJ412060 AJ412061 AJ412062 Y15227 TSC_hg19_v1_chr13_+_50656364 BC004131 AK312167 BC020692 AK095311	-719311	+	AY357595 BC104892 BC112009 NM_198989 AK303567 AK126830	42296	-	NM_001142279 NM_024570 TSC_hg19_v1_chr13_+_51483898	108200	+	TSC_hg19_v1_chr13_+_51483905 AY764036	108248	+	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AJ412023|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412024|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412061|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412062|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##Y15227|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC020692|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AK095311|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7##AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_001142279|RNASEH2B|79621|ribonuclease H2, subunit B##NM_024570|RNASEH2B|79621|ribonuclease H2, subunit B##AY764036|RNASEH2B|79621|ribonuclease H2, subunit B	0.151698	
chr3	123371343	123371462	reg1003186.p2	14.038	+	TSC_hg19_v1_chr3_-_123339426 NM_053031 NM_053032	-31926	-	BC113458 BC113456 BC100761 BC100762 BC100763 AF096773 AF096774 AF096775 AK314412 TSC_hg19_v1_chr3_-_123339352 BC017811 BC107783 Y09530 BC064420 AK314443	-32118	-	TSC_hg19_v1_chr3_-_123303927 CU687458 AK289983 NM_198402 AK125375 BC060839 AY191814 BC049369	-67469	-	TSC_hg19_v1_chr3_-_123411207 AK300610	39815	-	TSC_hg19_v1_chr3_-_123603158 BC064695 NM_053025 NM_053026 NM_053027 NM_053028	231769	-	TSC_hg19_v1_chr3_-_123680077 AK123060 AK307847 AK294979 BC040285	308684	-	NM_053031|MYLK|4638|myosin light chain kinase##NM_053032|MYLK|4638|myosin light chain kinase##BC113458|MYLK|4638|myosin light chain kinase##BC113456|MYLK|4638|myosin light chain kinase##BC100761|MYLK|4638|myosin light chain kinase##BC100762|MYLK|4638|myosin light chain kinase##BC100763|MYLK|4638|myosin light chain kinase##AF096773|MYLK|4638|myosin light chain kinase##AF096774|MYLK|4638|myosin light chain kinase##AF096775|MYLK|4638|myosin light chain kinase##AK314412|MYLK|4638|myosin light chain kinase##BC017811|MYLK|4638|myosin light chain kinase##BC107783|MYLK|4638|myosin light chain kinase##Y09530|MYLK|4638|myosin light chain kinase##BC064420|MYLK|4638|myosin light chain kinase##AK314443|MYLK|4638|myosin light chain kinase##AK289983|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##NM_198402|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC060839|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AY191814|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC049369|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AK300610|MYLK|4638|myosin light chain kinase##BC064695|MYLK|4638|myosin light chain kinase##NM_053025|MYLK|4638|myosin light chain kinase##NM_053026|MYLK|4638|myosin light chain kinase##NM_053027|MYLK|4638|myosin light chain kinase##NM_053028|MYLK|4638|myosin light chain kinase##AK123060|CCDC14|64770|coiled-coil domain containing 14##AK307847|CCDC14|64770|coiled-coil domain containing 14##AK294979|CCDC14|64770|coiled-coil domain containing 14##BC040285|CCDC14|64770|coiled-coil domain containing 14	0.971923	CTCF.p2:-22:0.972
chr8	139948539	139948657	reg1003863.p1	14.038	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	-22354	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-439492	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-3478397	+	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	766684	-	AB067469 TSC_hg19_v1_chr8_-_141467841	1519227	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	1519260	-	AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9	0.083856	
chr17	71425646	71425772	reg1004228.p1	14.036	+	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-117569	-	BC157870 NM_001129885	-167691	-	BC005005 TSC_hg19_v1_chr17_+_71229423	-196319	+	NM_001144952	214517	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	774106	+	TSC_hg19_v1_chr17_+_72199849 BC000603	774144	+	BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##BC005005|C17orf80|55028|chromosome 17 open reading frame 80##NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38	0.999887	CTCF.p2:-7:1.000
chr17	73197938	73198052	reg1003521.p1	14.032	+	TSC_hg19_v1_chr17_-_73179099 NM_001005849 NM_006937	-18887	-	TSC_hg19_v1_chr17_-_73179069 BC070159 BC016775	-18915	-	TSC_hg19_v1_chr17_-_73179055 BC071646 AK311837 BC022340 BC068465 BC008450	-18947	-	TSC_hg19_v1_chr17_+_73201533 NM_024844	3567	+	TSC_hg19_v1_chr17_+_73201801 AK302426 AF514995 BC000697 AK297574 AK295694 AK022611 AK298519 AL833893 CU674344 AF498261	3809	+	TSC_hg19_v1_chr17_-_73257685 AK302423 AK304692 AK291685 AK296843 AF190864 D63876 AF219138 AF219139 AL833603 BC070044	59674	-	NM_001005849|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##NM_006937|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC070159|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC016775|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC071646|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##AK311837|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC022340|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC068465|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC008450|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##NM_024844|NUP85|79902|nucleoporin 85kDa##AK302426|NUP85|79902|nucleoporin 85kDa##AF514995|NUP85|79902|nucleoporin 85kDa##BC000697|NUP85|79902|nucleoporin 85kDa##AK297574|NUP85|79902|nucleoporin 85kDa##AK295694|NUP85|79902|nucleoporin 85kDa##AK022611|NUP85|79902|nucleoporin 85kDa##AK298519|NUP85|79902|nucleoporin 85kDa##AL833893|NUP85|79902|nucleoporin 85kDa##AF498261|NUP85|79902|nucleoporin 85kDa##AK302423|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK304692|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK291685|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK296843|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AF190864|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##D63876|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AF219138|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AF219139|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AL833603|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##BC070044|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	1.342223	CTCF.p2:-8:0.952	CTCF.p2:56:0.390
chr3	122075408	122075528	reg1003169.p1	14.032	+	NM_005213 AK291308 BC010379 X05978 CR456914	-31394	+	NM_001178065 U20760	-172288	+	NM_000388 U20759	-172939	+	BC019231 BC109378 TSC_hg19_v1_chr3_-_122102079 BC054051 BC062725 NM_001017928	26609	-	NM_014367 AK026030 BC010896 BC015060 AF201944 AF107495 AF250321 TSC_hg19_v1_chr3_+_122103076 AK293994 AF191020	27600	+	BC025762 NM_019069 TSC_hg19_v1_chr3_-_122134925	59449	-	NM_005213|CSTA|1475|cystatin A (stefin A)##AK291308|CSTA|1475|cystatin A (stefin A)##BC010379|CSTA|1475|cystatin A (stefin A)##X05978|CSTA|1475|cystatin A (stefin A)##CR456914|CSTA|1475|cystatin A (stefin A)##NM_001178065|CASR|846|calcium-sensing receptor##U20760|CASR|846|calcium-sensing receptor##NM_000388|CASR|846|calcium-sensing receptor##U20759|CASR|846|calcium-sensing receptor##BC109378|CCDC58|131076|coiled-coil domain containing 58##BC054051|CCDC58|131076|coiled-coil domain containing 58##BC062725|CCDC58|131076|coiled-coil domain containing 58##NM_001017928|CCDC58|131076|coiled-coil domain containing 58##NM_014367|FAM162A|26355|family with sequence similarity 162, member A##AK026030|FAM162A|26355|family with sequence similarity 162, member A##BC010896|FAM162A|26355|family with sequence similarity 162, member A##BC015060|FAM162A|26355|family with sequence similarity 162, member A##AF201944|FAM162A|26355|family with sequence similarity 162, member A##AF107495|FAM162A|26355|family with sequence similarity 162, member A##AF250321|FAM162A|26355|family with sequence similarity 162, member A##AK293994|FAM162A|26355|family with sequence similarity 162, member A##AF191020|FAM162A|26355|family with sequence similarity 162, member A##BC025762|WDR5B|54554|WD repeat domain 5B##NM_019069|WDR5B|54554|WD repeat domain 5B	0.994815	CTCF.p2:9:0.995
chr1	234445814	234445956	reg1004997.p1	14.031	+	TSC_hg19_v1_chr1_+_234350005 BC037878	-95879	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-405273	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-695966	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	63487	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	168975	-	TSC_hg19_v1_chr1_-_234743489 BC020516	297641	-	BC037878|SLC35F3|148641|solute carrier family 35, member F3##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2	0.996013	CTCF.p2:-10:0.996
chr5	137114794	137114924	reg1004393.p1	14.031	+	TSC_hg19_v1_chr5_-_137090053 AK311328	-24787	-	BC012980 BC018949 TSC_hg19_v1_chr5_-_137090040 BC028976 BC030249 NM_006805	-24820	-	TSC_hg19_v1_chr5_-_137090036 BC018800	-24825	-	NM_001135940 NM_006790 AK300088 TSC_hg19_v1_chr5_+_137203548	88687	+	AF133820 AK300076 AK307620 AK312733 BC005376 TSC_hg19_v1_chr5_+_137203565 AF144477	88707	+	NM_014386 BC044581 AK301924 BC038714 AF182034 AF118125 CU692208	110292	+	BC012980|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC018949|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC028976|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC030249|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##NM_006805|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC018800|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##NM_001135940|MYOT|9499|myotilin##NM_006790|MYOT|9499|myotilin##AK300088|MYOT|9499|myotilin##AF133820|MYOT|9499|myotilin##AK300076|MYOT|9499|myotilin##AK307620|MYOT|9499|myotilin##AK312733|MYOT|9499|myotilin##BC005376|MYOT|9499|myotilin##AF144477|MYOT|9499|myotilin##NM_014386|PKD2L2|27039|polycystic kidney disease 2-like 2##BC044581|PKD2L2|27039|polycystic kidney disease 2-like 2##AK301924|PKD2L2|27039|polycystic kidney disease 2-like 2##BC038714|PKD2L2|27039|polycystic kidney disease 2-like 2##AF182034|PKD2L2|27039|polycystic kidney disease 2-like 2##AF118125|PKD2L2|27039|polycystic kidney disease 2-like 2	1.017043	CTCF.p2:-1:0.999
chr5	41270641	41270773	reg1004171.p1	14.031	+	BC035723 NM_001115131	-9168	-	J05024 J04506 AK292509 TSC_hg19_v1_chr5_-_41213635 J05064 AK313673 NM_000065	-57118	-	BC052962 BC034600 NM_173489	-199284	-	AB464014 TSC_hg19_v1_chr5_-_41510701 AK127142 BX648329 NM_001005473	239971	-	AB528366 CR457049 CU679223 DQ891805 DQ894989 TSC_hg19_v1_chr5_-_41870488 AK312327	599767	-	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	599876	-	BC035723|C6|729|complement component 6##NM_001115131|C6|729|complement component 6##J05024|C6|729|complement component 6##J04506|C6|729|complement component 6##AK292509|C6|729|complement component 6##J05064|C6|729|complement component 6##AK313673|C6|729|complement component 6##NM_000065|C6|729|complement component 6##BC052962|HEATR7B2|133558|HEAT repeat family member 7B2##BC034600|HEATR7B2|133558|HEAT repeat family member 7B2##NM_173489|HEATR7B2|133558|HEAT repeat family member 7B2##AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##CR457049|OXCT1|5019|3-oxoacid CoA transferase 1##DQ891805|OXCT1|5019|3-oxoacid CoA transferase 1##DQ894989|OXCT1|5019|3-oxoacid CoA transferase 1##AK312327|OXCT1|5019|3-oxoacid CoA transferase 1##BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1	0.908794	CTCF.p2:0:0.909
chr10	64577799	64577934	reg1001906.p2	14.030	+	TSC_hg19_v1_chr10_-_64576127 NM_000399 NM_001136177 NM_001136179	-1719	-	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	-1769	-	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	-13209	+	AK312813 NM_001136178	1060	-	TSC_hg19_v1_chr10_+_64893044 NM_030759 AK054957 AL136656	315165	+	TSC_hg19_v1_chr10_+_64893098 AF267866 AK301656 AK225257 AK225256 AY267839 AY267840 BC011707 AB590768 EU832288 EU832373	315280	+	NM_000399|EGR2|1959|early growth response 2##NM_001136177|EGR2|1959|early growth response 2##NM_001136179|EGR2|1959|early growth response 2##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK312813|EGR2|1959|early growth response 2##NM_001136178|EGR2|1959|early growth response 2##NM_030759|NRBF2|29982|nuclear receptor binding factor 2##AK054957|NRBF2|29982|nuclear receptor binding factor 2##AL136656|NRBF2|29982|nuclear receptor binding factor 2##AF267866|NRBF2|29982|nuclear receptor binding factor 2##AK301656|NRBF2|29982|nuclear receptor binding factor 2##AK225257|NRBF2|29982|nuclear receptor binding factor 2##AK225256|NRBF2|29982|nuclear receptor binding factor 2##AY267839|NRBF2|29982|nuclear receptor binding factor 2##AY267840|NRBF2|29982|nuclear receptor binding factor 2##BC011707|NRBF2|29982|nuclear receptor binding factor 2##EU832288|NRBF2|29982|nuclear receptor binding factor 2##EU832373|NRBF2|29982|nuclear receptor binding factor 2	0.0	
chr1	51762582	51762729	reg1002900.p1	14.029	+	TSC_hg19_v1_chr1_+_51702013 AK313140 AB024703 AF151881 BC020964 AB385089	-60441	+	BC036670 TSC_hg19_v1_chr1_+_51701971 BC047654	-60681	+	TSC_hg19_v1_chr1_+_51701944 NM_014372	-60706	+	BC028374 NM_001080494	25254	-	TSC_hg19_v1_chr1_-_51796233 AK301587 AK000220	33577	-	AF007170 NM_001144832	48083	-	AK313140|RNF11|26994|ring finger protein 11##AB024703|RNF11|26994|ring finger protein 11##AF151881|RNF11|26994|ring finger protein 11##BC020964|RNF11|26994|ring finger protein 11##BC036670|RNF11|26994|ring finger protein 11##BC047654|RNF11|26994|ring finger protein 11##NM_014372|RNF11|26994|ring finger protein 11##BC028374|TTC39A|22996|tetratricopeptide repeat domain 39A##NM_001080494|TTC39A|22996|tetratricopeptide repeat domain 39A##AK301587|TTC39A|22996|tetratricopeptide repeat domain 39A##AK000220|TTC39A|22996|tetratricopeptide repeat domain 39A##AF007170|TTC39A|22996|tetratricopeptide repeat domain 39A##NM_001144832|TTC39A|22996|tetratricopeptide repeat domain 39A	0.996568	CTCF.p2:3:0.997
chr1	89464527	89464658	reg1004842.p1	14.029	+	NM_001008661 NM_001008662 NM_001162536 NM_019610	-5950	-	TSC_hg19_v1_chr1_-_89458288 AL833593 BC012942 CR627392 AK301326 AK315917 AK057176 AY028624	-6233	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	-107319	-	JF927951 BC140837 BC144650 BC063819 CR936758 AK001823 BC017992 AK309096 AL136680 CR936755 NM_018284	23888	-	AK291783 M55542 AK298032 AK303893 AB208912 BC002666 NM_002053	66374	-	M55543 AK226018 BC073163 AK057968 AK314325 BC022272 NM_004120	127149	-	NM_001008661|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001008662|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001162536|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##NM_019610|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##AL833593|CCBL2|56267|cysteine conjugate-beta lyase 2##BC012942|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##CR627392|CCBL2|56267|cysteine conjugate-beta lyase 2##AK301326|CCBL2|56267|cysteine conjugate-beta lyase 2##AK315917|CCBL2|56267|cysteine conjugate-beta lyase 2##AK057176|CCBL2|56267|cysteine conjugate-beta lyase 2##AY028624|CCBL2|56267|cysteine conjugate-beta lyase 2##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB##JF927951|GBP3|2635|guanylate binding protein 3##BC140837|GBP3|2635|guanylate binding protein 3##BC144650|GBP3|2635|guanylate binding protein 3##BC063819|GBP3|2635|guanylate binding protein 3##CR936758|GBP3|2635|guanylate binding protein 3##AK001823|GBP3|2635|guanylate binding protein 3##BC017992|GBP3|2635|guanylate binding protein 3##AK309096|GBP3|2635|guanylate binding protein 3##AL136680|GBP3|2635|guanylate binding protein 3##CR936755|GBP3|2635|guanylate binding protein 3##NM_018284|GBP3|2635|guanylate binding protein 3##AK291783|GBP1|2633|guanylate binding protein 1, interferon-inducible##M55542|GBP1|2633|guanylate binding protein 1, interferon-inducible##AK298032|GBP1|2633|guanylate binding protein 1, interferon-inducible##AK303893|GBP1|2633|guanylate binding protein 1, interferon-inducible##AB208912|GBP1|2633|guanylate binding protein 1, interferon-inducible##BC002666|GBP1|2633|guanylate binding protein 1, interferon-inducible##NM_002053|GBP1|2633|guanylate binding protein 1, interferon-inducible##M55543|GBP2|2634|guanylate binding protein 2, interferon-inducible##AK226018|GBP2|2634|guanylate binding protein 2, interferon-inducible##BC073163|GBP2|2634|guanylate binding protein 2, interferon-inducible##AK057968|GBP2|2634|guanylate binding protein 2, interferon-inducible##AK314325|GBP2|2634|guanylate binding protein 2, interferon-inducible##BC022272|GBP2|2634|guanylate binding protein 2, interferon-inducible##NM_004120|GBP2|2634|guanylate binding protein 2, interferon-inducible	0.996191	CTCF.p2:-27:0.996
chrX	150320273	150320397	reg1004187.p1	14.029	+	TSC_hg19_v1_chrX_+_150151807 BX537505 NM_005342 Y10043 BC070482	-168528	+	TSC_hg19_v1_chrX_-_150067149 BC030536 AY358837 AL136580 NM_001184808 NM_001242614 NM_031462 NM_134445 NM_134446	-253128	-	AM393605 AM393786 DQ891322 DQ894506 AK290200 TSC_hg19_v1_chrX_-_150067096 AK293244 AY078165 AY078166 AY078167 AK125020 AK291375 BC025729 AK295217	-253242	-	NM_004224 U52219 BC103696 BC105683 BC105684 EU432118 AY114101 AY114102	24864	+	TSC_hg19_v1_chrX_+_150565667 NM_001017980	245327	+	TSC_hg19_v1_chrX_+_150565686 AK096835	245345	+	BX537505|HMGB3|3149|high mobility group box 3##NM_005342|HMGB3|3149|high mobility group box 3##Y10043|HMGB3|3149|high mobility group box 3##BC070482|HMGB3|3149|high mobility group box 3##BC030536|CD99L2|83692|CD99 molecule-like 2##AY358837|CD99L2|83692|CD99 molecule-like 2##AL136580|CD99L2|83692|CD99 molecule-like 2##NM_001184808|CD99L2|83692|CD99 molecule-like 2##NM_001242614|CD99L2|83692|CD99 molecule-like 2##NM_031462|CD99L2|83692|CD99 molecule-like 2##NM_134445|CD99L2|83692|CD99 molecule-like 2##NM_134446|CD99L2|83692|CD99 molecule-like 2##AM393605|CD99L2|83692|CD99 molecule-like 2##AM393786|CD99L2|83692|CD99 molecule-like 2##DQ891322|CD99L2|83692|CD99 molecule-like 2##DQ894506|CD99L2|83692|CD99 molecule-like 2##AK290200|CD99L2|83692|CD99 molecule-like 2##AK293244|CD99L2|83692|CD99 molecule-like 2##AY078165|CD99L2|83692|CD99 molecule-like 2##AY078166|CD99L2|83692|CD99 molecule-like 2##AY078167|CD99L2|83692|CD99 molecule-like 2##AK125020|CD99L2|83692|CD99 molecule-like 2##AK291375|CD99L2|83692|CD99 molecule-like 2##BC025729|CD99L2|83692|CD99 molecule-like 2##AK295217|CD99L2|83692|CD99 molecule-like 2##NM_004224|GPR50|9248|G protein-coupled receptor 50##U52219|GPR50|9248|G protein-coupled receptor 50##BC103696|GPR50|9248|G protein-coupled receptor 50##BC105683|GPR50|9248|G protein-coupled receptor 50##BC105684|GPR50|9248|G protein-coupled receptor 50##EU432118|GPR50|9248|G protein-coupled receptor 50##AY114101|GPR50|9248|G protein-coupled receptor 50##AY114102|GPR50|9248|G protein-coupled receptor 50##NM_001017980|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AK096835|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	0.994131	CTCF.p2:-8:0.994
chr7	74493513	74493635	reg1003877.p1	14.028	+	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	-3882	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	-3936	-	AB463349 AF410455 AM392683 DQ893169 TSC_hg19_v1_chr7_-_74489627 AL136804 AK309117 BC007823 BC019008	-3972	-	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	14800	+	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	373946	-	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	494996	+	BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AF410455|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AM392683|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##DQ893169|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AL136804|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK309117|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC007823|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC019008|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3	0.423911	CTCF.p2:-10:0.424
chr15	74927620	74927750	reg1004366.p1	14.027	+	AK293769 TSC_hg19_v1_chr15_+_74908195 BC019881 CR933693 AK291983 AK301689 BC002555 AK225680 BC006103	-19464	+	AK091692 AX747131 NM_001130028	-20351	+	L29217 L29220 NM_003992	-26973	+	AK024781 AK225099 TSC_hg19_v1_chr15_-_74988340 AF193058	60647	-	TSC_hg19_v1_chr15_-_74988360 BC011534 BC021271 AK056339 NM_001142443 NM_001142444 NM_025083	60678	-	AK310810 AM233517 AM233518 AM233519 AM233520 AM236046 AM236047 BC023019 AY871801 K03191 AK223108 AK223113 AK313880 NM_000499	90108	-	AK293769|CLK3|1198|CDC-like kinase 3##BC019881|CLK3|1198|CDC-like kinase 3##CR933693|CLK3|1198|CDC-like kinase 3##AK291983|CLK3|1198|CDC-like kinase 3##AK301689|CLK3|1198|CDC-like kinase 3##BC002555|CLK3|1198|CDC-like kinase 3##AK225680|CLK3|1198|CDC-like kinase 3##BC006103|CLK3|1198|CDC-like kinase 3##AK091692|CLK3|1198|CDC-like kinase 3##NM_001130028|CLK3|1198|CDC-like kinase 3##L29217|CLK3|1198|CDC-like kinase 3##L29220|CLK3|1198|CDC-like kinase 3##NM_003992|CLK3|1198|CDC-like kinase 3##AK024781|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK225099|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AF193058|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC011534|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC021271|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK056339|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142443|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142444|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_025083|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK310810|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233517|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233518|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233519|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233520|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236046|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236047|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC023019|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AY871801|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##K03191|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223108|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223113|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK313880|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##NM_000499|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1	0.476418	CTCF.p2:-7:0.476
chr2	218933632	218933753	reg1004033.p1	14.027	+	TSC_hg19_v1_chr2_-_218867719 AK309785	-65969	-	AK001785 TSC_hg19_v1_chr2_-_218843551	-90146	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	-124911	-	NM_198483	45	+	U11872 NM_001168298	56312	+	NM_001557 U11874 L19593 U11875 BC037961 AK290906 AK312664	57097	+	AK309785|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##NM_198483|RUFY4|285180|RUN and FYVE domain containing 4##U11872|CXCR2|3579|chemokine (C-X-C motif) receptor 2##NM_001168298|CXCR2|3579|chemokine (C-X-C motif) receptor 2##NM_001557|CXCR2|3579|chemokine (C-X-C motif) receptor 2##U11874|CXCR2|3579|chemokine (C-X-C motif) receptor 2##L19593|CXCR2|3579|chemokine (C-X-C motif) receptor 2##U11875|CXCR2|3579|chemokine (C-X-C motif) receptor 2##BC037961|CXCR2|3579|chemokine (C-X-C motif) receptor 2##AK290906|CXCR2|3579|chemokine (C-X-C motif) receptor 2##AK312664|CXCR2|3579|chemokine (C-X-C motif) receptor 2	1.013611	CTCF.p2:3:0.999
chr22	17980821	17980951	reg1004299.p1	14.025	+	TSC_hg19_v1_chr22_-_17747522 AF277398	-233315	-	AK314321 TSC_hg19_v1_chr22_-_17700267 AK295174 AK292689	-280523	-	AF190746 NM_017424	-290108	-	TSC_hg19_v1_chr22_+_18043149 AJ428203 AY008285 NM_031481 BC031644 AK308974 AK095706 AK309110	62333	+	BT007128 CU012943 CU013231 EU831478 EU831565 AB528072 CR456385 X71491 TSC_hg19_v1_chr22_-_18111488 X76228 BC004443	130559	-	TSC_hg19_v1_chr22_-_18111509 AK312394	130620	-	AF277398|CECR3|27442|cat eye syndrome chromosome region, candidate 3 (non-protein coding)##AK314321|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK295174|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK292689|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF190746|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_017424|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AJ428203|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AY008285|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##NM_031481|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BC031644|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK308974|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK095706|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK309110|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BT007128|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU012943|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU013231|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831478|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831565|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CR456385|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X71491|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X76228|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##BC004443|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##AK312394|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1	0.993633	CTCF.p2:22:0.994
chr3	10780680	10780814	reg1005159.p1	14.025	+	L20977 TSC_hg19_v1_chr3_-_10749723	-31025	-	AB210008 TSC_hg19_v1_chr3_-_10547352	-233401	-	AK308898 NM_001001331 NM_001683 TSC_hg19_v1_chr3_-_10547271	-233478	-	TSC_hg19_v1_chr3_+_10857912 AK312719 BC036083 NM_014229 S75989 AB527355	77160	+	NM_003042 TSC_hg19_v1_chr3_+_11034421	253674	+	TSC_hg19_v1_chr3_+_11034439 BC057291 BC033904	253715	+	L20977|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC057291|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC033904|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1	0.99939	CTCF.p2:4:0.999
chr9	86527195	86527341	reg1004818.p1	14.025	+	AB033131 AB033132 BC014476 NM_001135953 NM_025211	-94620	-	AK074535 TSC_hg19_v1_chr9_-_86323127 NM_013438 NM_053067	-204126	-	TSC_hg19_v1_chr9_-_86322874 AL136643	-204396	-	TSC_hg19_v1_chr9_-_86536400 AK297689 BC140788 AY237536 AY237537 AY237538 NM_017576	9121	-	BC137461 BC137462 TSC_hg19_v1_chr9_-_86571611	44307	-	BC004407 TSC_hg19_v1_chr9_-_86571631	44371	-	AB033131|GKAP1|80318|G kinase anchoring protein 1##AB033132|GKAP1|80318|G kinase anchoring protein 1##BC014476|GKAP1|80318|G kinase anchoring protein 1##NM_001135953|GKAP1|80318|G kinase anchoring protein 1##NM_025211|GKAP1|80318|G kinase anchoring protein 1##AK074535|UBQLN1|29979|ubiquilin 1##NM_013438|UBQLN1|29979|ubiquilin 1##NM_053067|UBQLN1|29979|ubiquilin 1##AL136643|UBQLN1|29979|ubiquilin 1##AK297689|KIF27|55582|kinesin family member 27##BC140788|KIF27|55582|kinesin family member 27##AY237536|KIF27|55582|kinesin family member 27##AY237537|KIF27|55582|kinesin family member 27##AY237538|KIF27|55582|kinesin family member 27##NM_017576|KIF27|55582|kinesin family member 27##BC137461|C9orf64|84267|chromosome 9 open reading frame 64##BC137462|C9orf64|84267|chromosome 9 open reading frame 64##BC004407|C9orf64|84267|chromosome 9 open reading frame 64	0.950318	CTCF.p2:22:0.950
chr1	27136652	27136757	reg1003464.p1	14.024	+	AK000484 AK225521 AK301626 NM_001202554 AK056539	-22023	+	TSC_hg19_v1_chr1_+_27114455 NM_017837 BC013568	-22248	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	-35416	+	TSC_hg19_v1_chr1_+_27153178 BC066776 NM_032283	16493	+	BC023552 AF029082 NM_006142 TSC_hg19_v1_chr1_+_27189639 BC001550 BC000329 BC002995 BC000995 AB464718 M93010 DQ894162 CU674492 CR541905 CR541926	52961	+	CU675813 AY364261 TSC_hg19_v1_chr1_-_27216757 BC007815 BC008634 BC020272	79971	-	AK000484|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK225521|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK301626|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_001202554|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK056539|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_017837|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##BC013568|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##BC066776|ZDHHC18|84243|zinc finger, DHHC-type containing 18##NM_032283|ZDHHC18|84243|zinc finger, DHHC-type containing 18##BC023552|SFN|2810|stratifin##AF029082|SFN|2810|stratifin##NM_006142|SFN|2810|stratifin##BC001550|SFN|2810|stratifin##BC000329|SFN|2810|stratifin##BC002995|SFN|2810|stratifin##BC000995|SFN|2810|stratifin##M93010|SFN|2810|stratifin##DQ894162|SFN|2810|stratifin##CR541905|SFN|2810|stratifin##CR541926|SFN|2810|stratifin##AY364261|GPN2|54707|GPN-loop GTPase 2##BC007815|GPN2|54707|GPN-loop GTPase 2##BC008634|GPN2|54707|GPN-loop GTPase 2##BC020272|GPN2|54707|GPN-loop GTPase 2	0.978954	CTCF.p2:14:0.979
chr2	101601429	101601556	reg1003795.p1	14.024	+	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	-164726	+	TSC_hg19_v1_chr2_+_101179454 NM_024065 BC001021 AK300827 AF110511 AF267853	-422056	+	AB164464 NM_001011717	-514549	+	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	17230	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	166291	-	TSC_hg19_v1_chr2_+_101869347 NM_017546	267845	+	NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_024065|PDCL3|79031|phosducin-like 3##BC001021|PDCL3|79031|phosducin-like 3##AK300827|PDCL3|79031|phosducin-like 3##AF110511|PDCL3|79031|phosducin-like 3##AF267853|PDCL3|79031|phosducin-like 3##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S##NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_017546|C2orf29|55571|chromosome 2 open reading frame 29	0.995966	CTCF.p2:12:0.996
chr3	45252173	45252300	reg1004265.p1	14.024	+	TSC_hg19_v1_chr3_-_45187900 BC021099 NM_022842 NM_178181	-64322	-	TSC_hg19_v1_chr3_-_45187871 BC069254 AY167484 AY358779 AK314441 AF468010 AK026622	-64361	-	TSC_hg19_v1_chr3_-_45187849 AY375452 AY026461	-64385	-	AL080235 TSC_hg19_v1_chr3_-_45267132	14864	-	AB078417 AF438313 TSC_hg19_v1_chr3_-_45267780 BC057390	15472	-	TSC_hg19_v1_chr3_-_45267804 NM_015444	15589	-	BC021099|CDCP1|64866|CUB domain containing protein 1##NM_022842|CDCP1|64866|CUB domain containing protein 1##NM_178181|CDCP1|64866|CUB domain containing protein 1##BC069254|CDCP1|64866|CUB domain containing protein 1##AY167484|CDCP1|64866|CUB domain containing protein 1##AY358779|CDCP1|64866|CUB domain containing protein 1##AK314441|CDCP1|64866|CUB domain containing protein 1##AF468010|CDCP1|64866|CUB domain containing protein 1##AK026622|CDCP1|64866|CUB domain containing protein 1##AY375452|CDCP1|64866|CUB domain containing protein 1##AY026461|CDCP1|64866|CUB domain containing protein 1##AL080235|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	0.983739	CTCF.p2:-5:0.984
chr9	73900181	73900326	reg1004396.p1	14.024	+	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	-163717	-	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	-416293	-	D31716 S72504 NM_001206	-870698	-	AL136545 TSC_hg19_v1_chr9_-_74061901	161630	-	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	483325	-	AF151825 TSC_hg19_v1_chr9_-_74525994	625672	-	AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##D31716|KLF9|687|Kruppel-like factor 9##S72504|KLF9|687|Kruppel-like factor 9##NM_001206|KLF9|687|Kruppel-like factor 9##AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2##AF151825|FAM108B1|51104|family with sequence similarity 108, member B1	0.275197	CTCF.p2:-7:0.275
chr9	116354066	116354193	reg1003669.p1	14.023	+	U27655 AK125094 TSC_hg19_v1_chr9_+_116343207	-10941	+	AF006609 NM_021106	-11190	+	TSC_hg19_v1_chr9_+_116327336 AK289666 AK301515 AK310705 NM_134427	-26797	+	AF490838 NM_144489 AK054584	2081	+	TSC_hg19_v1_chr9_+_116356408 BC018072 BC019039 CU676160	2352	+	TSC_hg19_v1_chr9_+_116638585 BC036039 NM_133374 BC136287 BC143826 AK126896 BC053892	284470	+	U27655|RGS3|5998|regulator of G-protein signaling 3##AK125094|RGS3|5998|regulator of G-protein signaling 3##AF006609|RGS3|5998|regulator of G-protein signaling 3##NM_021106|RGS3|5998|regulator of G-protein signaling 3##AK289666|RGS3|5998|regulator of G-protein signaling 3##AK301515|RGS3|5998|regulator of G-protein signaling 3##AK310705|RGS3|5998|regulator of G-protein signaling 3##NM_134427|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3##BC018072|RGS3|5998|regulator of G-protein signaling 3##BC019039|RGS3|5998|regulator of G-protein signaling 3##BC036039|ZNF618|114991|zinc finger protein 618##NM_133374|ZNF618|114991|zinc finger protein 618##BC136287|ZNF618|114991|zinc finger protein 618##BC143826|ZNF618|114991|zinc finger protein 618##AK126896|ZNF618|114991|zinc finger protein 618##BC053892|ZNF618|114991|zinc finger protein 618	0.995792	CTCF.p2:-15:0.996
chr6	110360742	110360879	reg1003005.p1	14.022	+	BC126301 BC117298 BC043414 NM_005284 HQ258210 HQ258216 HQ709190 HQ709191	-60554	+	TSC_hg19_v1_chr6_+_110012521 AK222732	-348286	+	TSC_hg19_v1_chr6_+_110012514 AK291671 AK293422 D87464	-348302	+	TSC_hg19_v1_chr6_-_110500864 BC019019 BC021022 BC044591 AK097838 BC068546	140033	-	TSC_hg19_v1_chr6_-_110501166 NM_001024934 NM_001024935 NM_001024936 NM_003931	140375	-	TSC_hg19_v1_chr6_+_110501629 AF038392 NM_015891 BC117145 BC126114 AK314601 AK222721 BC018059 AK295055 AB528038 HQ258473 AB208903 AF061241 AF015044	140813	+	BC126301|GPR6|2830|G protein-coupled receptor 6##BC117298|GPR6|2830|G protein-coupled receptor 6##BC043414|GPR6|2830|G protein-coupled receptor 6##NM_005284|GPR6|2830|G protein-coupled receptor 6##HQ258210|GPR6|2830|G protein-coupled receptor 6##HQ258216|GPR6|2830|G protein-coupled receptor 6##HQ709190|GPR6|2830|G protein-coupled receptor 6##AK222732|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK291671|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK293422|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##D87464|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##BC044591|WASF1|8936|WAS protein family, member 1##AK097838|WASF1|8936|WAS protein family, member 1##BC068546|WASF1|8936|WAS protein family, member 1##NM_001024934|WASF1|8936|WAS protein family, member 1##NM_001024935|WASF1|8936|WAS protein family, member 1##NM_001024936|WASF1|8936|WAS protein family, member 1##NM_003931|WASF1|8936|WAS protein family, member 1##AF038392|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##NM_015891|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC117145|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC126114|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK314601|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK222721|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK295055|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##HQ258473|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AB208903|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AF061241|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AF015044|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	0.993064	CTCF.p2:2:0.993
chr9	137590495	137590622	reg1004875.p1	14.019	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	-56748	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	-56911	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-372158	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	182102	+	D83920 DQ891426 DQ894436 CR749452 BC020635 AK314867 NM_002003	219199	-	NM_014279 NM_006334 TSC_hg19_v1_chr9_+_137967133	376557	+	D90279|COL5A1|1289|collagen, type V, alpha 1##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D83920|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ891426|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ894436|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##CR749452|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##BC020635|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##AK314867|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_002003|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_014279|OLFM1|10439|olfactomedin 1##NM_006334|OLFM1|10439|olfactomedin 1	0.99626	CTCF.p2:-13:0.996
chr17	77387986	77388094	reg1002959.p1	14.018	+	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-317010	+	AF329840 NM_198593 BC021553	-357518	+	TSC_hg19_v1_chr17_+_77020308 AK055541	-367730	+	NM_001082575	90522	-	AY230663 BC041453 NM_178543 AY358622	316849	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	363941	+	AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2	0.941694	CTCF.p2:3:0.942
chr22	22990586	22990722	reg1004804.p1	14.017	+	NM_199127 X98922 CU686896 BC069534	-1856	+	BC014074 NM_206955 NM_206956 AK304593 TSC_hg19_v1_chr22_-_22901678 BC039731 U65011 NM_006115 NM_206953 NM_206954 BC022008	-89060	-	BC053901 AK093108 NM_080740	-116050	-	TSC_hg19_v1_chr22_+_23010757 L29162	20106	+	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	38549	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	49864	+	NM_199127|GGTLC2|91227|gamma-glutamyltransferase light chain 2##X98922|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC069534|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC014074|PRAME|23532|preferentially expressed antigen in melanoma##NM_206955|PRAME|23532|preferentially expressed antigen in melanoma##NM_206956|PRAME|23532|preferentially expressed antigen in melanoma##AK304593|PRAME|23532|preferentially expressed antigen in melanoma##BC039731|PRAME|23532|preferentially expressed antigen in melanoma##U65011|PRAME|23532|preferentially expressed antigen in melanoma##NM_006115|PRAME|23532|preferentially expressed antigen in melanoma##NM_206953|PRAME|23532|preferentially expressed antigen in melanoma##NM_206954|PRAME|23532|preferentially expressed antigen in melanoma##BC022008|PRAME|23532|preferentially expressed antigen in melanoma##BC053901|ZNF280A|129025|zinc finger protein 280A##AK093108|ZNF280A|129025|zinc finger protein 280A##NM_080740|ZNF280A|129025|zinc finger protein 280A##BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25##DQ896079|IGL@|3535|immunoglobulin lambda locus	1.011847	CTCF.p2:-17:0.998
chr10	124408384	124408487	reg1002011.p2	14.016	+	AF159456 AJ000342 AJ243212 AJ243224 NM_004406 NM_007329 NM_017579 BC153299 AJ297935 AK304149 TSC_hg19_v1_chr10_+_124320269 AK304128	-88209	+	TSC_hg19_v1_chr10_+_124221068 AK091944 AX747270 NM_002775 AK092476 AK290089 BC011352 D87258 BC031082 Y07921 AB590567	-187359	+	BC066349 NM_001099667 BC090924	-194256	+	BC140922 BC065903 NM_001010912	50898	-	AY260047 AY260048 AY260049 AY260050 NM_022034	197255	-	BC031343 AK300849 NM_001204364 NM_152644	230681	-	AF159456|DMBT1|1755|deleted in malignant brain tumors 1##AJ000342|DMBT1|1755|deleted in malignant brain tumors 1##AJ243212|DMBT1|1755|deleted in malignant brain tumors 1##AJ243224|DMBT1|1755|deleted in malignant brain tumors 1##NM_004406|DMBT1|1755|deleted in malignant brain tumors 1##NM_007329|DMBT1|1755|deleted in malignant brain tumors 1##NM_017579|DMBT1|1755|deleted in malignant brain tumors 1##BC153299|DMBT1|1755|deleted in malignant brain tumors 1##AJ297935|DMBT1|1755|deleted in malignant brain tumors 1##AK304149|DMBT1|1755|deleted in malignant brain tumors 1##AK304128|DMBT1|1755|deleted in malignant brain tumors 1##AK091944|HTRA1|5654|HtrA serine peptidase 1##NM_002775|HTRA1|5654|HtrA serine peptidase 1##AK092476|HTRA1|5654|HtrA serine peptidase 1##AK290089|HTRA1|5654|HtrA serine peptidase 1##BC011352|HTRA1|5654|HtrA serine peptidase 1##D87258|HTRA1|5654|HtrA serine peptidase 1##BC031082|HTRA1|5654|HtrA serine peptidase 1##Y07921|HTRA1|5654|HtrA serine peptidase 1##BC066349|ARMS2|387715|age-related maculopathy susceptibility 2##NM_001099667|ARMS2|387715|age-related maculopathy susceptibility 2##BC090924|ARMS2|387715|age-related maculopathy susceptibility 2##BC140922|C10orf120|399814|chromosome 10 open reading frame 120##BC065903|C10orf120|399814|chromosome 10 open reading frame 120##NM_001010912|C10orf120|399814|chromosome 10 open reading frame 120##AY260047|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260048|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260049|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260050|CUZD1|50624|CUB and zona pellucida-like domains 1##NM_022034|CUZD1|50624|CUB and zona pellucida-like domains 1##BC031343|FAM24B|196792|family with sequence similarity 24, member B##AK300849|FAM24B-CUZD1|100533195|FAM24B-CUZD1 readthrough##NM_001204364|FAM24B|196792|family with sequence similarity 24, member B##NM_152644|FAM24B|196792|family with sequence similarity 24, member B	0.0	
chr1	40282615	40282737	reg1002397.p2	14.016	+	TSC_hg19_v1_chr1_-_40254528 AY303955 NM_001720	-28150	-	TSC_hg19_v1_chr1_-_40254516 BC108678	-28161	-	BC023526 TSC_hg19_v1_chr1_-_40254233	-28487	-	AY702933 AY702934 AY702935 AY702936 AY702937 AY702938 AY702939 AY702940 AY702941 AY702942 AY702943 AY702944 AY702945 AY702946 AY702947 TSC_hg19_v1_chr1_-_40349138 AY052768 BC010741	66448	-	AK296453 AK307910 TSC_hg19_v1_chr1_-_40349167	66491	-	TSC_hg19_v1_chr1_-_40349179 AK223478 AK304759 AY303390 BC128155 BC128156 NM_017646 BC107569	66498	-	AY303955|BMP8B|656|bone morphogenetic protein 8b##NM_001720|BMP8B|656|bone morphogenetic protein 8b##BC108678|BMP8B|656|bone morphogenetic protein 8b##BC023526|BMP8B|656|bone morphogenetic protein 8b##AY702933|TRIT1|54802|tRNA isopentenyltransferase 1##AY702934|TRIT1|54802|tRNA isopentenyltransferase 1##AY702935|TRIT1|54802|tRNA isopentenyltransferase 1##AY702936|TRIT1|54802|tRNA isopentenyltransferase 1##AY702937|TRIT1|54802|tRNA isopentenyltransferase 1##AY702938|TRIT1|54802|tRNA isopentenyltransferase 1##AY702939|TRIT1|54802|tRNA isopentenyltransferase 1##AY702940|TRIT1|54802|tRNA isopentenyltransferase 1##AY702941|TRIT1|54802|tRNA isopentenyltransferase 1##AY702942|TRIT1|54802|tRNA isopentenyltransferase 1##AY702943|TRIT1|54802|tRNA isopentenyltransferase 1##AY702944|TRIT1|54802|tRNA isopentenyltransferase 1##AY702945|TRIT1|54802|tRNA isopentenyltransferase 1##AY702946|TRIT1|54802|tRNA isopentenyltransferase 1##AY702947|TRIT1|54802|tRNA isopentenyltransferase 1##AY052768|TRIT1|54802|tRNA isopentenyltransferase 1##BC010741|TRIT1|54802|tRNA isopentenyltransferase 1##AK296453|TRIT1|54802|tRNA isopentenyltransferase 1##AK307910|TRIT1|54802|tRNA isopentenyltransferase 1##AK223478|TRIT1|54802|tRNA isopentenyltransferase 1##AK304759|TRIT1|54802|tRNA isopentenyltransferase 1##AY303390|TRIT1|54802|tRNA isopentenyltransferase 1##BC128155|TRIT1|54802|tRNA isopentenyltransferase 1##BC128156|TRIT1|54802|tRNA isopentenyltransferase 1##NM_017646|TRIT1|54802|tRNA isopentenyltransferase 1##BC107569|TRIT1|54802|tRNA isopentenyltransferase 1	0.999364	CTCF.p2:-15:0.999
chr5	132155917	132156056	reg1003921.p1	14.016	+	TSC_hg19_v1_chr5_+_132149022 NM_175873	-6959	+	AF440763 NM_001098813 TSC_hg19_v1_chr5_-_132113705	-42399	-	TSC_hg19_v1_chr5_-_132112954 BC140759 BC171779 AK057797 AF179995 AF440761 AF440762 D86957 NM_001098811 NM_001098812 NM_015146	-42982	-	BC104914 BC104916 BC143494 AF314142 NM_133456	5946	-	DQ655971 TSC_hg19_v1_chr5_-_132166340 BC040980	10318	-	AB075840 NM_001172700	10603	-	NM_175873|ANKRD43|134548|ankyrin repeat domain 43##AF440763|SEPT8|23176|septin 8##NM_001098813|SEPT8|23176|septin 8##BC140759|SEPT8|23176|septin 8##BC171779|SEPT8|23176|septin 8##AK057797|SEPT8|23176|septin 8##AF179995|SEPT8|23176|septin 8##AF440761|SEPT8|23176|septin 8##AF440762|SEPT8|23176|septin 8##D86957|SEPT8|23176|septin 8##NM_001098811|SEPT8|23176|septin 8##NM_001098812|SEPT8|23176|septin 8##NM_015146|SEPT8|23176|septin 8##BC104914|SHROOM1|134549|shroom family member 1##BC104916|SHROOM1|134549|shroom family member 1##BC143494|SHROOM1|134549|shroom family member 1##AF314142|SHROOM1|134549|shroom family member 1##NM_133456|SHROOM1|134549|shroom family member 1##AB075840|SHROOM1|134549|shroom family member 1##NM_001172700|SHROOM1|134549|shroom family member 1	0.99968	CTCF.p2:15:1.000
chr12	122135128	122135284	reg1003373.p1	14.015	+	BC057760 NM_173855	-27647	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	-70563	+	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	-116292	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	15538	+	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	96368	-	TSC_hg19_v1_chr12_-_122240852 AK311480	105651	-	BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B##AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)	0.9996	CTCF.p2:-11:1.000
chr4	122405825	122405946	reg1002151.p1	14.015	+	TSC_hg19_v1_chr4_-_122302115 NM_198179 AK309337	-103723	-	AK303192 NM_001244764	-257265	-	AK301058 NM_001128843	-268104	-	BC012804 BC012822 TSC_hg19_v1_chr4_-_122618109 BC004993 X12454 D00172 M21731	212227	-	TSC_hg19_v1_chr4_-_122618136 AK297909 M19384 BC018671 BC032093	212248	-	TSC_hg19_v1_chr4_-_122618148 J03745 AK312644 NM_001154	212271	-	NM_198179|QRFPR|84109|pyroglutamylated RFamide peptide receptor##AK309337|QRFPR|84109|pyroglutamylated RFamide peptide receptor##AK303192|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3##AK301058|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3##BC012804|ANXA5|308|annexin A5##BC012822|ANXA5|308|annexin A5##BC004993|ANXA5|308|annexin A5##X12454|ANXA5|308|annexin A5##D00172|ANXA5|308|annexin A5##M21731|ANXA5|308|annexin A5##AK297909|ANXA5|308|annexin A5##M19384|ANXA5|308|annexin A5##BC018671|ANXA5|308|annexin A5##BC032093|ANXA5|308|annexin A5##J03745|ANXA5|308|annexin A5##AK312644|ANXA5|308|annexin A5##NM_001154|ANXA5|308|annexin A5	0.211367	CTCF.p2:2:0.211
chr7	100609542	100609640	reg1003701.p3	14.015	+	BC105060 BC105062 BC143469 AK291321 TSC_hg19_v1_chr7_-_100493509 BC001541 AK223443 AF334270 BC026315 BC036813 NM_000665 NM_015831	-116080	-	BC017456 BC067904 AK292467 NM_001015072	-122286	-	TSC_hg19_v1_chr7_+_100472809 BC109116	-136765	+	AK130455 TSC_hg19_v1_chr7_+_100612694	3102	+	NM_001164462	3312	+	TSC_hg19_v1_chr7_+_100663360 AJ606307 AJ606308 NM_001040105	53774	+	BC105060|ACHE|43|acetylcholinesterase##BC105062|ACHE|43|acetylcholinesterase##BC143469|ACHE|43|acetylcholinesterase##AK291321|ACHE|43|acetylcholinesterase##BC001541|ACHE|43|acetylcholinesterase##AK223443|ACHE|43|acetylcholinesterase##AF334270|ACHE|43|acetylcholinesterase##BC026315|ACHE|43|acetylcholinesterase##BC036813|ACHE|43|acetylcholinesterase##NM_000665|ACHE|43|acetylcholinesterase##NM_015831|ACHE|43|acetylcholinesterase##BC017456|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##BC067904|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##AK292467|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##NM_001015072|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##BC109116|SRRT|51593|serrate RNA effector molecule homolog (Arabidopsis)##NM_001164462|MUC12|10071|mucin 12, cell surface associated##AJ606307|MUC17|140453|mucin 17, cell surface associated##AJ606308|MUC17|140453|mucin 17, cell surface associated##NM_001040105|MUC17|140453|mucin 17, cell surface associated	0.949341	CTCF.p2:8:0.949
chr12	52976924	52977043	reg1004395.p1	14.013	+	AJ508777 NM_175053	-9375	-	AJ308601 EU832765 GQ129308 AJ308600 BC103917 BC103918 AJ308599 AK122795 NM_033448	-30151	-	CU687194 AB463816 DQ892846 DQ896092 BC071906 BC024292 BC042132 AK296823 AK093720 AK303972 AK310827 AX748277 TSC_hg19_v1_chr12_-_52914179 NM_000424	-62822	-	AK302016 AK093060 AX747893 HQ258454 BC113686 AY033495 AK293645 NM_001146225 NM_001146226 NM_080747	18285	-	BC109212 BC109213 AJ508776 NM_175068	35354	-	BC096294 BC099643 BC099644 M99061 NM_000423	68969	-	AJ508777|KRT74|121391|keratin 74##NM_175053|KRT74|121391|keratin 74##AJ308601|KRT71|112802|keratin 71##EU832765|KRT71|112802|keratin 71##GQ129308|KRT71|112802|keratin 71##AJ308600|KRT71|112802|keratin 71##BC103917|KRT71|112802|keratin 71##BC103918|KRT71|112802|keratin 71##AJ308599|KRT71|112802|keratin 71##AK122795|KRT71|112802|keratin 71##NM_033448|KRT71|112802|keratin 71##DQ892846|KRT5|3852|keratin 5##DQ896092|KRT5|3852|keratin 5##BC071906|KRT5|3852|keratin 5##BC024292|KRT5|3852|keratin 5##BC042132|KRT5|3852|keratin 5##AK296823|KRT5|3852|keratin 5##AK093720|KRT5|3852|keratin 5##AK303972|KRT5|3852|keratin 5##AK310827|KRT5|3852|keratin 5##NM_000424|KRT5|3852|keratin 5##AK302016|KRT72|140807|keratin 72##AK093060|KRT72|140807|keratin 72##HQ258454|KRT72|140807|keratin 72##BC113686|KRT72|140807|keratin 72##AY033495|KRT72|140807|keratin 72##AK293645|KRT72|140807|keratin 72##NM_001146225|KRT72|140807|keratin 72##NM_001146226|KRT72|140807|keratin 72##NM_080747|KRT72|140807|keratin 72##BC109212|KRT73|319101|keratin 73##AJ508776|KRT73|319101|keratin 73##NM_175068|KRT73|319101|keratin 73##BC096294|KRT2|3849|keratin 2##BC099643|KRT2|3849|keratin 2##BC099644|KRT2|3849|keratin 2##M99061|KRT2|3849|keratin 2##NM_000423|KRT2|3849|keratin 2	0.013608	
chr15	65678067	65678170	reg1002399.p3	14.013	+	BC042054 TSC_hg19_v1_chr15_-_65670341 BC067107 NM_004884	-7767	-	BC006389 NM_017851 TSC_hg19_v1_chr15_-_65579223 AK000516	-98958	-	BC035776 AF035408 AY358904 AK225652 AK225926 AK313352 TSC_hg19_v1_chr15_-_65503811 NM_003613	-174306	-	TSC_hg19_v1_chr15_-_65715258 AB529157	37127	-	TSC_hg19_v1_chr15_-_65715412 AB052622 NM_020962	37283	-	AY354202 BC040203 NM_197960 AK302638	131489	-	BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC006389|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##NM_017851|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##AK000516|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##BC035776|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AF035408|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AY358904|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225652|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225926|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK313352|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##NM_003613|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AB052622|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##NM_020962|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##AY354202|DPP8|54878|dipeptidyl-peptidase 8##BC040203|DPP8|54878|dipeptidyl-peptidase 8##NM_197960|DPP8|54878|dipeptidyl-peptidase 8##AK302638|DPP8|54878|dipeptidyl-peptidase 8	0.975606	CTCF.p2:4:0.976
chr12	121443252	121443371	reg1003841.p2	14.012	+	HM449088 HM449089 M57732 NM_000545 BC104908 BC104910 BC143483 TSC_hg19_v1_chr12_+_121416562 AB527468 EU446660	-26753	+	TSC_hg19_v1_chr12_+_121416378 X71346 HM116541 HM116542 HM116543 HM116544 HM116545 HM116546 HM116547 HM116548 HM116549 HM116550 HM116551 X71347 HM116552 HM116557 HM116558 HM116559 HM116560 HM116561 HM116562 HM116563 AK298422	-26914	+	TSC_hg19_v1_chr12_-_121342070 AK223590 NM_139015	-101177	-	TSC_hg19_v1_chr12_-_121454230 BC014661	10933	-	TSC_hg19_v1_chr12_-_121454291 AK222630 AK299170 AK301566 AK022510 AK225162 NM_022895 AK307971	10983	-	TSC_hg19_v1_chr12_-_121476781 HQ258301 AJ225089 AK314419 NM_003733 NM_198213 AK023956 BC117408 BC117410	33472	-	HM449088|HNF1A|6927|HNF1 homeobox A##HM449089|HNF1A|6927|HNF1 homeobox A##M57732|HNF1A|6927|HNF1 homeobox A##NM_000545|HNF1A|6927|HNF1 homeobox A##BC104908|HNF1A|6927|HNF1 homeobox A##BC104910|HNF1A|6927|HNF1 homeobox A##BC143483|HNF1A|6927|HNF1 homeobox A##EU446660|HNF1A|6927|HNF1 homeobox A##X71346|HNF1A|6927|HNF1 homeobox A##HM116541|HNF1A|6927|HNF1 homeobox A##HM116542|HNF1A|6927|HNF1 homeobox A##HM116543|HNF1A|6927|HNF1 homeobox A##HM116544|HNF1A|6927|HNF1 homeobox A##HM116545|HNF1A|6927|HNF1 homeobox A##HM116546|HNF1A|6927|HNF1 homeobox A##HM116547|HNF1A|6927|HNF1 homeobox A##HM116548|HNF1A|6927|HNF1 homeobox A##HM116549|HNF1A|6927|HNF1 homeobox A##X71347|HNF1A|6927|HNF1 homeobox A##HM116552|HNF1A|6927|HNF1 homeobox A##HM116557|HNF1A|6927|HNF1 homeobox A##HM116558|HNF1A|6927|HNF1 homeobox A##HM116559|HNF1A|6927|HNF1 homeobox A##HM116560|HNF1A|6927|HNF1 homeobox A##HM116561|HNF1A|6927|HNF1 homeobox A##HM116563|HNF1A|6927|HNF1 homeobox A##AK298422|HNF1A|6927|HNF1 homeobox A##AK223590|SPPL3|121665|signal peptide peptidase-like 3##NM_139015|SPPL3|121665|signal peptide peptidase-like 3##BC014661|C12orf43|64897|chromosome 12 open reading frame 43##AK222630|C12orf43|64897|chromosome 12 open reading frame 43##AK299170|C12orf43|64897|chromosome 12 open reading frame 43##AK301566|C12orf43|64897|chromosome 12 open reading frame 43##AK022510|C12orf43|64897|chromosome 12 open reading frame 43##AK225162|C12orf43|64897|chromosome 12 open reading frame 43##NM_022895|C12orf43|64897|chromosome 12 open reading frame 43##AK307971|C12orf43|64897|chromosome 12 open reading frame 43##HQ258301|OASL|8638|2'-5'-oligoadenylate synthetase-like##AJ225089|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK314419|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_003733|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_198213|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK023956|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117408|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117410|OASL|8638|2'-5'-oligoadenylate synthetase-like	0.450378	CTCF.p2:-7:0.450
chr11	109810031	109810168	reg1003413.p1	14.011	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-517200	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-517256	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-1274285	+	AK095101 TSC_hg19_v1_chr11_+_109963524	153429	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	154031	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	357214	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.640315	CTCF.p2:13:0.640
chr13	36204941	36205073	reg1005586.p1	14.011	+	AK294737 NM_001204197 TSC_hg19_v1_chr13_+_36050945 AK315939	-154082	+	BC028170 AB593021 TSC_hg19_v1_chr13_-_36050827 AB593022 AK313185 AB073388 NM_005584	-154211	-	TSC_hg19_v1_chr13_+_35516429 NM_015678 AF467288	-688549	+	AK299059 AK311183 AK295777 TSC_hg19_v1_chr13_-_36429805 CR627093 AK308925 AK311434 AK311438 AK311195 NM_001195415 NM_001195416 NM_001195430	224890	-	TSC_hg19_v1_chr13_-_36705434 AB002367 BC152456	500430	-	AK295102 TSC_hg19_v1_chr13_-_36705468	500466	-	AK294737|NBEA|26960|neurobeachin##NM_001204197|NBEA|26960|neurobeachin##AK315939|NBEA|26960|neurobeachin##BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_015678|NBEA|26960|neurobeachin##AF467288|NBEA|26960|neurobeachin##AK299059|DCLK1|9201|doublecortin-like kinase 1##AK311183|DCLK1|9201|doublecortin-like kinase 1##AK295777|DCLK1|9201|doublecortin-like kinase 1##CR627093|DCLK1|9201|doublecortin-like kinase 1##AK308925|DCLK1|9201|doublecortin-like kinase 1##AK311434|DCLK1|9201|doublecortin-like kinase 1##AK311438|DCLK1|9201|doublecortin-like kinase 1##AK311195|DCLK1|9201|doublecortin-like kinase 1##NM_001195415|DCLK1|9201|doublecortin-like kinase 1##NM_001195416|DCLK1|9201|doublecortin-like kinase 1##NM_001195430|DCLK1|9201|doublecortin-like kinase 1##AB002367|DCLK1|9201|doublecortin-like kinase 1##BC152456|DCLK1|9201|doublecortin-like kinase 1##AK295102|DCLK1|9201|doublecortin-like kinase 1	0.24821	CTCF.p2:-4:0.248
chr4	115580675	115580796	reg1003760.p1	14.011	+	NM_003360 U30930	-37213	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-61152	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-679896	-	BC113075 BC012326 AK289670 AB036429 NM_022569	454246	-	AK074617 BC030831 NM_152402	2425998	-	TSC_hg19_v1_chr4_+_118954764 AY358852	3374036	+	NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.996111	CTCF.p2:10:0.996
chr7	31784037	31784149	reg1001945.p1	14.011	+	NM_001145123 NM_006658	-57463	+	AK128026 NM_194300	-227116	+	AK055238 AF248954 NM_022728	-403571	-	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	326412	-	AK094180 NM_001191059 U40371 NM_005020	326918	-	NM_001191058	554289	-	NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129##AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191058|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	0.990605	CTCF.p2:-4:0.991
chr10	61385914	61386038	reg1004211.p1	14.010	+	AK299924 NM_001143773	-263316	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-263691	-	AL365474 NM_001143774 AM393181	-448688	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	83748	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	280225	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	280348	-	AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6	1.828116	CTCF.p2:16:0.886	CTCF.p2:-22:0.942
chr6	134418373	134418507	reg1004791.p1	14.009	+	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	-44737	-	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	-144095	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	-145076	+	CU674630 Y10032 AF153609 BC001263 FM205710 TSC_hg19_v1_chr6_-_134496003 AK098509 AK295422 BX649005	77534	-	TSC_hg19_v1_chr6_-_134496010 NM_005627	77579	-	FM205707 TSC_hg19_v1_chr6_-_134496850	78421	-	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1##Y10032|SGK1|6446|serum/glucocorticoid regulated kinase 1##AF153609|SGK1|6446|serum/glucocorticoid regulated kinase 1##BC001263|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205710|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK098509|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK295422|SGK1|6446|serum/glucocorticoid regulated kinase 1##BX649005|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_005627|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205707|SGK1|6446|serum/glucocorticoid regulated kinase 1	0.996998	CTCF.p2:18:0.997
chr6	44205748	44205897	reg1004251.p1	14.007	+	TSC_hg19_v1_chr6_+_44195011 DQ892133 DQ895327 CU679195	-10794	+	TSC_hg19_v1_chr6_+_44191517 AK090615 AB490709	-14244	+	TSC_hg19_v1_chr6_+_44191331 NM_001078175 NM_001078176 BC001382 AK293558 BC008954 NM_001078177	-14479	+	TSC_hg19_v1_chr6_+_44214837 BC068474 AK312255 AY359878 BC016753 AK294643 AK297367 D28342 BX649079 BC004928 BC012807 M16660 NM_007355	8995	+	BC014485 TSC_hg19_v1_chr6_+_44214855 BC007327 AL136543	9051	+	AK307572 AY491520 DQ893314 DQ896628 DQ896632 EU176354 AB106538 TSC_hg19_v1_chr6_-_44225250 AK075456 AB097021 AB097039 AK123749 AK293344 BC024288 AK293251 NM_178148	19343	-	DQ892133|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##DQ895327|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK090615|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AB490709|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078175|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078176|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC001382|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK293558|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC008954|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078177|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC068474|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK312255|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AY359878|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC016753|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK294643|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK297367|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BX649079|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC004928|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC012807|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##M16660|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##NM_007355|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC014485|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC007327|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AL136543|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK307572|SLC35B2|347734|solute carrier family 35, member B2##AY491520|SLC35B2|347734|solute carrier family 35, member B2##DQ893314|SLC35B2|347734|solute carrier family 35, member B2##DQ896628|SLC35B2|347734|solute carrier family 35, member B2##DQ896632|SLC35B2|347734|solute carrier family 35, member B2##EU176354|SLC35B2|347734|solute carrier family 35, member B2##AB106538|SLC35B2|347734|solute carrier family 35, member B2##AK075456|SLC35B2|347734|solute carrier family 35, member B2##AB097021|SLC35B2|347734|solute carrier family 35, member B2##AB097039|SLC35B2|347734|solute carrier family 35, member B2##AK123749|SLC35B2|347734|solute carrier family 35, member B2##AK293344|SLC35B2|347734|solute carrier family 35, member B2##BC024288|SLC35B2|347734|solute carrier family 35, member B2##AK293251|SLC35B2|347734|solute carrier family 35, member B2##NM_178148|SLC35B2|347734|solute carrier family 35, member B2	0.928464	CTCF.p2:11:0.928
chr18	3666384	3666521	reg1004140.p1	14.006	+	TSC_hg19_v1_chr18_+_3594077 AK093095 AX747919 BC137437	-72310	+	NM_173211	-212681	+	TSC_hg19_v1_chr18_+_3451599 NM_170695 NM_173210 AK307230 BC031268	-214821	+	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	178878	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	207832	-	AK294777 AK294717 NM_001242762 NM_001242763	208275	-	AK093095|FLJ35776|649446|uncharacterized LOC649446##BC137437|FLJ35776|649446|uncharacterized LOC649446##NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1##NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1##BC031268|TGIF1|7050|TGFB-induced factor homeobox 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	0.573825	CTCF.p2:4:0.574
chr21	37792348	37792474	reg1004257.p1	14.006	+	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	-34721	+	TSC_hg19_v1_chr21_+_37692548 BC058002 NM_015358 AK295133 BC007311 D50926 BC094779 BC132731 BC144116 AK292957 AB489143	-99892	+	AJ237839 NM_005128	-255573	+	BC012126 NM_012130 AY355349	46320	-	AF314090 AY355348 NM_001146079 NM_144492	59976	-	AJ566765 NM_001146078	122486	-	NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC058002|MORC3|23515|MORC family CW-type zinc finger 3##NM_015358|MORC3|23515|MORC family CW-type zinc finger 3##AK295133|MORC3|23515|MORC family CW-type zinc finger 3##BC007311|MORC3|23515|MORC family CW-type zinc finger 3##D50926|MORC3|23515|MORC family CW-type zinc finger 3##BC094779|MORC3|23515|MORC family CW-type zinc finger 3##BC132731|MORC3|23515|MORC family CW-type zinc finger 3##BC144116|MORC3|23515|MORC family CW-type zinc finger 3##AK292957|MORC3|23515|MORC family CW-type zinc finger 3##AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14##AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14##AJ566765|CLDN14|23562|claudin 14##NM_001146078|CLDN14|23562|claudin 14	0.802858	CTCF.p2:-7:0.803
chr9	130497673	130497788	reg1002728.p3	14.006	+	TSC_hg19_v1_chr9_-_130497669 NM_001085347 NM_001134430 NM_001134431 NM_001252018 NM_001252021 NM_001252023 NM_130459	-70	-	TSC_hg19_v1_chr9_-_130497605 BC080527 AK027677 BC100907 BC100908 BC100909 BC100910 AK075520 AK055034 AK092388 AX747514 AY358180 BC062340	-152	-	AK294862 BC031281 AK057342 AK302422 AK302737 NM_144965	-19381	+	AK291393 TSC_hg19_v1_chr9_-_130517562 NM_001142534 AK056068 NM_001142533	19837	-	AK311510 NM_001142532 AK294386 NM_001142531	26977	-	CU693348 BC027962 AY358440 AF124251 AK292041 BX647905 NM_001252334 NM_005489	35848	-	NM_001085347|TOR2A|27433|torsin family 2, member A##NM_001134430|TOR2A|27433|torsin family 2, member A##NM_001134431|TOR2A|27433|torsin family 2, member A##NM_001252018|TOR2A|27433|torsin family 2, member A##NM_001252021|TOR2A|27433|torsin family 2, member A##NM_001252023|TOR2A|27433|torsin family 2, member A##NM_130459|TOR2A|27433|torsin family 2, member A##BC080527|TOR2A|27433|torsin family 2, member A##AK027677|TOR2A|27433|torsin family 2, member A##BC100907|TOR2A|27433|torsin family 2, member A##BC100908|TOR2A|27433|torsin family 2, member A##BC100909|TOR2A|27433|torsin family 2, member A##BC100910|TOR2A|27433|torsin family 2, member A##AK075520|TOR2A|27433|torsin family 2, member A##AK055034|TOR2A|27433|torsin family 2, member A##AK092388|TOR2A|27433|torsin family 2, member A##AY358180|TOR2A|27433|torsin family 2, member A##BC062340|TOR2A|27433|torsin family 2, member A##AK294862|TTC16|158248|tetratricopeptide repeat domain 16##BC031281|TTC16|158248|tetratricopeptide repeat domain 16##AK057342|TTC16|158248|tetratricopeptide repeat domain 16##AK302422|TTC16|158248|tetratricopeptide repeat domain 16##AK302737|TTC16|158248|tetratricopeptide repeat domain 16##NM_144965|TTC16|158248|tetratricopeptide repeat domain 16##AK291393|SH2D3C|10044|SH2 domain containing 3C##NM_001142534|SH2D3C|10044|SH2 domain containing 3C##AK056068|SH2D3C|10044|SH2 domain containing 3C##NM_001142533|SH2D3C|10044|SH2 domain containing 3C##AK311510|SH2D3C|10044|SH2 domain containing 3C##NM_001142532|SH2D3C|10044|SH2 domain containing 3C##AK294386|SH2D3C|10044|SH2 domain containing 3C##NM_001142531|SH2D3C|10044|SH2 domain containing 3C##BC027962|SH2D3C|10044|SH2 domain containing 3C##AY358440|SH2D3C|10044|SH2 domain containing 3C##AF124251|SH2D3C|10044|SH2 domain containing 3C##AK292041|SH2D3C|10044|SH2 domain containing 3C##BX647905|SH2D3C|10044|SH2 domain containing 3C##NM_001252334|SH2D3C|10044|SH2 domain containing 3C##NM_005489|SH2D3C|10044|SH2 domain containing 3C	0.989457	CTCF.p2:-6:0.989
chr14	88635021	88635139	reg1003581.p1	14.005	+	BC029479 TSC_hg19_v1_chr14_+_88490954	-144157	+	NM_003608 TSC_hg19_v1_chr14_+_88471478 AK313797 BC035633 BC071715	-163580	+	NM_001201402	-175072	-	EU978940 EU978941 BC075022 BC075021 AF385399 NM_138318 TSC_hg19_v1_chr14_-_88737268	102136	-	AK290518 TSC_hg19_v1_chr14_-_88789574 AK313499 NM_138317	154494	-	AK315263 TSC_hg19_v1_chr14_-_88793059 EU978938	157923	-	BC029479|LOC283587|283587|uncharacterized LOC283587##NM_003608|GPR65|8477|G protein-coupled receptor 65##AK313797|GPR65|8477|G protein-coupled receptor 65##BC035633|GPR65|8477|G protein-coupled receptor 65##BC071715|GPR65|8477|G protein-coupled receptor 65##NM_001201402|GALC|2581|galactosylceramidase##EU978940|KCNK10|54207|potassium channel, subfamily K, member 10##EU978941|KCNK10|54207|potassium channel, subfamily K, member 10##BC075022|KCNK10|54207|potassium channel, subfamily K, member 10##BC075021|KCNK10|54207|potassium channel, subfamily K, member 10##AF385399|KCNK10|54207|potassium channel, subfamily K, member 10##NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10##AK290518|KCNK10|54207|potassium channel, subfamily K, member 10##AK313499|KCNK10|54207|potassium channel, subfamily K, member 10##NM_138317|KCNK10|54207|potassium channel, subfamily K, member 10##AK315263|KCNK10|54207|potassium channel, subfamily K, member 10##EU978938|KCNK10|54207|potassium channel, subfamily K, member 10	1.021101	CTCF.p2:-1:0.999
chr22	29791088	29791200	reg1004166.p1	14.004	+	TSC_hg19_v1_chr22_-_29784570 BC046242 NM_001127 NM_001166019 NM_145730	-6552	-	L13939 TSC_hg19_v1_chr22_-_29784436	-6707	-	TSC_hg19_v1_chr22_-_29711687 BC058077 BC050739 BC022473 NM_001007279 NM_006477	-79446	-	AJ010228 AJ010229 NM_021026	43427	+	AK302660 NM_021076 TSC_hg19_v1_chr22_+_29876208 BC073969 AF203032	85071	+	NM_001002878 NM_001002879 BC003615 TSC_hg19_v1_chr22_-_29949699 AK025385 AB023200 AK225752 NM_001002877 NM_003678	158553	-	BC046242|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_001127|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_001166019|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_145730|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##L13939|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##BC058077|RASL10A|10633|RAS-like, family 10, member A##BC050739|RASL10A|10633|RAS-like, family 10, member A##BC022473|RASL10A|10633|RAS-like, family 10, member A##NM_001007279|RASL10A|10633|RAS-like, family 10, member A##NM_006477|RASL10A|10633|RAS-like, family 10, member A##AJ010228|RFPL1|5988|ret finger protein-like 1##AJ010229|RFPL1|5988|ret finger protein-like 1##NM_021026|RFPL1|5988|ret finger protein-like 1##AK302660|NEFH|4744|neurofilament, heavy polypeptide##NM_021076|NEFH|4744|neurofilament, heavy polypeptide##BC073969|NEFH|4744|neurofilament, heavy polypeptide##AF203032|NEFH|4744|neurofilament, heavy polypeptide##NM_001002878|THOC5|8563|THO complex 5##NM_001002879|THOC5|8563|THO complex 5##BC003615|THOC5|8563|THO complex 5##AK025385|THOC5|8563|THO complex 5##AB023200|THOC5|8563|THO complex 5##AK225752|THOC5|8563|THO complex 5##NM_001002877|THOC5|8563|THO complex 5##NM_003678|THOC5|8563|THO complex 5	0.111181	
chr7	45894011	45894105	reg1002991.p1	14.004	+	TSC_hg19_v1_chr7_-_45808577 AL832059 BC092503	-85468	-	AB209496 TSC_hg19_v1_chr7_+_45614187	-279859	+	TSC_hg19_v1_chr7_+_45614105 AF497515 NM_021116	-279956	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	34047	+	AF042356 TSC_hg19_v1_chr7_+_45933167	39076	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	66748	-	AL832059|SEPT7P2|641977|septin 7 pseudogene 2##BC092503|SEPT7P2|641977|septin 7 pseudogene 2##AB209496|ADCY1|107|adenylate cyclase 1 (brain)##AF497515|ADCY1|107|adenylate cyclase 1 (brain)##NM_021116|ADCY1|107|adenylate cyclase 1 (brain)##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3	0.999703	CTCF.p2:8:1.000
chr14	105175097	105175202	reg1003566.p1	14.003	+	TSC_hg19_v1_chr14_+_105173955 DQ395338 DQ395339 DQ395340	-1052	+	TSC_hg19_v1_chr14_+_105155954 NM_001031714 NM_022489 NM_032714 AK290083 BC006173 BX248757	-19265	+	TSC_hg19_v1_chr14_+_105147469 BC035345	-27687	+	BC047904 NM_152328 AK095921 AY037159 TSC_hg19_v1_chr14_+_105190565 BX248286 CU690530	15420	+	BC032039 NM_199165 AK096720	21078	+	TSC_hg19_v1_chr14_+_105219483 NM_006427 NM_021709 AK223332 AK316550 BC034562	44339	+	DQ395338|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395339|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395340|INF2|64423|inverted formin, FH2 and WH2 domain containing##NM_001031714|INF2|64423|inverted formin, FH2 and WH2 domain containing##NM_022489|INF2|64423|inverted formin, FH2 and WH2 domain containing##NM_032714|INF2|64423|inverted formin, FH2 and WH2 domain containing##AK290083|INF2|64423|inverted formin, FH2 and WH2 domain containing##BC006173|INF2|64423|inverted formin, FH2 and WH2 domain containing##BX248757|INF2|64423|inverted formin, FH2 and WH2 domain containing##BC047904|ADSSL1|122622|adenylosuccinate synthase like 1##NM_152328|ADSSL1|122622|adenylosuccinate synthase like 1##AK095921|ADSSL1|122622|adenylosuccinate synthase like 1##AY037159|ADSSL1|122622|adenylosuccinate synthase like 1##BX248286|ADSSL1|122622|adenylosuccinate synthase like 1##BC032039|ADSSL1|122622|adenylosuccinate synthase like 1##NM_199165|ADSSL1|122622|adenylosuccinate synthase like 1##AK096720|ADSSL1|122622|adenylosuccinate synthase like 1##NM_006427|SIVA1|10572|SIVA1, apoptosis-inducing factor##NM_021709|SIVA1|10572|SIVA1, apoptosis-inducing factor##AK223332|SIVA1|10572|SIVA1, apoptosis-inducing factor##AK316550|SIVA1|10572|SIVA1, apoptosis-inducing factor##BC034562|SIVA1|10572|SIVA1, apoptosis-inducing factor	0.998528	CTCF.p2:4:0.999
chr2	85956196	85956322	reg1002986.p1	14.003	+	NM_006433 NM_012483 X54101 AK310057 AK311537 AK311012 AK311657 BC063245 AK304728 TSC_hg19_v1_chr2_+_85921514 DQ892267 DQ895468 BC023576 CR541859 X05044	-34779	+	NM_000542 NM_198843	-60396	-	TSC_hg19_v1_chr2_-_85888519 AB439563 AB439564 AB439565 AB439566	-67684	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	24746	+	AY152815 NM_001042437	138533	-	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	159827	-	NM_006433|GNLY|10578|granulysin##NM_012483|GNLY|10578|granulysin##X54101|GNLY|10578|granulysin##AK310057|GNLY|10578|granulysin##AK311537|GNLY|10578|granulysin##AK311012|GNLY|10578|granulysin##AK311657|GNLY|10578|granulysin##BC063245|GNLY|10578|granulysin##AK304728|GNLY|10578|granulysin##DQ892267|GNLY|10578|granulysin##DQ895468|GNLY|10578|granulysin##BC023576|GNLY|10578|granulysin##CR541859|GNLY|10578|granulysin##X05044|GNLY|10578|granulysin##NM_000542|SFTPB|6439|surfactant protein B##NM_198843|SFTPB|6439|surfactant protein B##AB439563|SFTPB|6439|surfactant protein B##AB439565|SFTPB|6439|surfactant protein B##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	0.9937	CTCF.p2:6:0.994
chr6	44201986	44202113	reg1004765.p1	14.003	+	TSC_hg19_v1_chr6_+_44195011 DQ892133 DQ895327 CU679195	-7021	+	TSC_hg19_v1_chr6_+_44191517 AK090615 AB490709	-10471	+	TSC_hg19_v1_chr6_+_44191331 NM_001078175 NM_001078176 BC001382 AK293558 BC008954 NM_001078177	-10706	+	TSC_hg19_v1_chr6_+_44214837 BC068474 AK312255 AY359878 BC016753 AK294643 AK297367 D28342 BX649079 BC004928 BC012807 M16660 NM_007355	12768	+	BC014485 TSC_hg19_v1_chr6_+_44214855 BC007327 AL136543	12824	+	AK307572 AY491520 DQ893314 DQ896628 DQ896632 EU176354 AB106538 TSC_hg19_v1_chr6_-_44225250 AK075456 AB097021 AB097039 AK123749 AK293344 BC024288 AK293251 NM_178148	23116	-	DQ892133|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##DQ895327|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK090615|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AB490709|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078175|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078176|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC001382|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK293558|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC008954|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078177|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC068474|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK312255|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AY359878|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC016753|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK294643|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK297367|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BX649079|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC004928|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC012807|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##M16660|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##NM_007355|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC014485|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC007327|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AL136543|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK307572|SLC35B2|347734|solute carrier family 35, member B2##AY491520|SLC35B2|347734|solute carrier family 35, member B2##DQ893314|SLC35B2|347734|solute carrier family 35, member B2##DQ896628|SLC35B2|347734|solute carrier family 35, member B2##DQ896632|SLC35B2|347734|solute carrier family 35, member B2##EU176354|SLC35B2|347734|solute carrier family 35, member B2##AB106538|SLC35B2|347734|solute carrier family 35, member B2##AK075456|SLC35B2|347734|solute carrier family 35, member B2##AB097021|SLC35B2|347734|solute carrier family 35, member B2##AB097039|SLC35B2|347734|solute carrier family 35, member B2##AK123749|SLC35B2|347734|solute carrier family 35, member B2##AK293344|SLC35B2|347734|solute carrier family 35, member B2##BC024288|SLC35B2|347734|solute carrier family 35, member B2##AK293251|SLC35B2|347734|solute carrier family 35, member B2##NM_178148|SLC35B2|347734|solute carrier family 35, member B2	0.8971	CTCF.p2:8:0.897
chr13	113597151	113597277	reg1004296.p1	14.002	+	TSC_hg19_v1_chr13_+_113344493 NM_015205 NM_032189	-252635	+	TSC_hg19_v1_chr13_-_113344130 AK057085	-253108	-	AK129953 NM_207440	-295857	+	TSC_hg19_v1_chr13_+_113622764 AB002360	25571	+	TSC_hg19_v1_chr13_+_113623680 AK315969 NM_001112732 AK295670	26381	+	TSC_hg19_v1_chr13_+_113633625 AK307867	36425	+	NM_015205|ATP11A|23250|ATPase, class VI, type 11A##NM_032189|ATP11A|23250|ATPase, class VI, type 11A##AK057085|LOC440149|440149|uncharacterized LOC440149##AK129953|C13orf35|400165|chromosome 13 open reading frame 35##NM_207440|C13orf35|400165|chromosome 13 open reading frame 35##AB002360|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK315969|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##NM_001112732|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK295670|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK307867|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	0.982146	CTCF.p2:-6:0.982
chr19	42048482	42048610	reg1004461.p1	14.002	+	NM_001130514	-99484	+	TSC_hg19_v1_chr19_-_41945831 AK298197 NM_001167869 NM_001167870 NM_001167871 NM_018035	-102713	-	TSC_hg19_v1_chr19_-_41945814 BC013323 AK316313	-102732	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	34031	+	D90276 AK298701 NM_001817	84888	-	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	143606	-	NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##AK298197|ATP5SL|55101|ATP5S-like##NM_001167869|ATP5SL|55101|ATP5S-like##NM_001167870|ATP5SL|55101|ATP5S-like##NM_001167871|ATP5SL|55101|ATP5S-like##NM_018035|ATP5SL|55101|ATP5S-like##BC013323|ATP5SL|55101|ATP5S-like##AK316313|ATP5SL|55101|ATP5S-like##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7	0.959742	CTCF.p2:-7:0.960
chr6	43742601	43742731	reg1005153.p1	14.002	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-3796	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-4132	+	TSC_hg19_v1_chr6_+_43738284 AF022375	-4419	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	225708	+	CR627460 TSC_hg19_v1_chr6_+_44094741	352032	+	TSC_hg19_v1_chr6_-_44095161 AK312086	352494	-	M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##AF022375|VEGFA|7422|vascular endothelial growth factor A##BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14	0.74057	CTCF.p2:3:0.741
chr7	75081837	75081962	reg1003177.p1	14.002	+	AB354586 TSC_hg19_v1_chr7_-_75072021	-9888	-	AK126486 TSC_hg19_v1_chr7_+_75039644 BC044928 BC103750	-42245	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	-56934	+	TSC_hg19_v1_chr7_-_75115568 BC082993 NM_001099415	33670	-	NM_001099435	42399	+	BC101598 BC143635 BC087844 BC022886 BC007683 BC014421 BC029646 TSC_hg19_v1_chr7_-_75157432 BC046153	75286	-	AB354586|POM121C|100101267|POM121 membrane glycoprotein C##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC044928|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC103750|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73##BC082993|POM121C|100101267|POM121 membrane glycoprotein C##NM_001099415|POM121C|100101267|POM121 membrane glycoprotein C##NM_001099435|SPDYE5|442590|speedy homolog E5 (Xenopus laevis)##BC101598|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC143635|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC087844|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC007683|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC014421|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC046153|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3	0.999541	CTCF.p2:-1:1.000
chr6	41570920	41571054	reg1004711.p1	14.001	+	TSC_hg19_v1_chr6_+_41514342 BC052803	-56650	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	-56828	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-267421	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	35235	+	AJ608793 AJ608794 AJ608792 TSC_hg19_v1_chr6_-_41673723	102714	-	TSC_hg19_v1_chr6_-_41702787 AJ608787 BC032448 NM_007162	131778	-	BC052803|FOXP4|116113|forkhead box P4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor##AJ608793|TFEB|7942|transcription factor EB##AJ608794|TFEB|7942|transcription factor EB##AJ608792|TFEB|7942|transcription factor EB##AJ608787|TFEB|7942|transcription factor EB##BC032448|TFEB|7942|transcription factor EB##NM_007162|TFEB|7942|transcription factor EB	0.96626	CTCF.p2:-7:0.966
chr14	21159289	21159423	reg1002895.p2	14.000	+	TSC_hg19_v1_chr14_+_21156940 NM_001097577 NM_194431 BC062698 BC020704	-2424	+	TSC_hg19_v1_chr14_+_21152776 AK313989 BC015520 BC054880 BX248010	-6580	+	FJ236304 NM_001145 AK092422 NM_002937	-7003	+	NM_006683 X76383 BC096698 BC096731 BC069407	54756	+	AY358865 NM_022360 BC128030	77247	+	BC020848 NM_005615 AK313580	89862	+	NM_001097577|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_194431|RNASE4|6038|ribonuclease, RNase A family, 4##BC062698|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC020704|ANG|283|angiogenin, ribonuclease, RNase A family, 5##AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC015520|RNASE4|6038|ribonuclease, RNase A family, 4##BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BX248010|RNASE4|6038|ribonuclease, RNase A family, 4##FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5##AK092422|RNASE4|6038|ribonuclease, RNase A family, 4##NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4##NM_006683|EDDM3A|10876|epididymal protein 3A##X76383|EDDM3A|10876|epididymal protein 3A##BC096698|EDDM3A|10876|epididymal protein 3A##BC096731|EDDM3A|10876|epididymal protein 3A##BC069407|EDDM3A|10876|epididymal protein 3A##AY358865|EDDM3B|64184|epididymal protein 3B##NM_022360|EDDM3B|64184|epididymal protein 3B##BC128030|EDDM3B|64184|epididymal protein 3B##BC020848|RNASE6|6039|ribonuclease, RNase A family, k6##NM_005615|RNASE6|6039|ribonuclease, RNase A family, k6##AK313580|RNASE6|6039|ribonuclease, RNase A family, k6	0.0	
chr5	35925115	35925241	reg1004301.p1	14.000	+	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	-68145	+	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	-307169	+	NM_000949	-694356	-	NM_001042625 BC017586 NM_144647	13630	-	CU686633 BC068446 AK308046 AK290809 AK057066 AK303770 AK315851 AK296136 NM_152404	66260	-	BC035012 NM_001171873	75949	-	BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##NM_000949|PRLR|5618|prolactin receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like##BC068446|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK308046|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK290809|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK057066|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK303770|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK315851|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK296136|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_152404|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	0.039931	
chr10	45960546	45960690	reg1003354.p1	13.999	+	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	-90921	+	TSC_hg19_v1_chr10_+_45869638 AB208946 NM_000698 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223	-90981	+	AK131555 NM_001004297	-149563	-	AK313340 BC025394 NM_001002266 AK307667	70201	-	TSC_hg19_v1_chr10_-_46090318 BC066988 NM_001002265 NM_145021	129676	-	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	207596	-	BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase##AB208946|ALOX5|240|arachidonate 5-lipoxygenase##NM_000698|ALOX5|240|arachidonate 5-lipoxygenase##AK225603|ALOX5|240|arachidonate 5-lipoxygenase##BC130332|ALOX5|240|arachidonate 5-lipoxygenase##BC132677|ALOX5|240|arachidonate 5-lipoxygenase##BC143985|ALOX5|240|arachidonate 5-lipoxygenase##BC143986|ALOX5|240|arachidonate 5-lipoxygenase##AK315223|ALOX5|240|arachidonate 5-lipoxygenase##AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##AK313340|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC025394|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002266|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK307667|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC066988|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002265|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_145021|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4	0.414225	CTCF.p2:-10:0.414
chr16	16687411	16687545	reg1003142.p1	13.998	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-360948	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-360990	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-360996	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	877327	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1885913	-	TSC_hg19_v1_chr16_-_18798077 AK127316	2110618	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.756009	CTCF.p2:-1:0.756
chr7	128544836	128544945	reg1003021.p1	13.998	+	TSC_hg19_v1_chr7_-_128543406 AK095464	-1489	-	NM_001195150	-38427	+	TSC_hg19_v1_chr7_+_128502927 CR456896	-41948	+	TSC_hg19_v1_chr7_-_128550763 AK122706 NM_001135914 NM_199349	5876	-	AK293654 AY693665 AY693668 NM_001098629 NM_001098630 NM_001242452 DQ995492 U51127 AK297083 AY504947 AY693666 AY693667 EU258896	33146	+	DQ995493 AY693669 BC004139 BC004201 DQ277633 NM_032643	33368	+	AK095464|KCP|375616|kielin/chordin-like protein##NM_001195150|LOC100130705|100130705|uncharacterized LOC100130705##CR456896|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##AK122706|KCP|375616|kielin/chordin-like protein##NM_001135914|KCP|375616|kielin/chordin-like protein##NM_199349|KCP|375616|kielin/chordin-like protein##AK293654|IRF5|3663|interferon regulatory factor 5##AY693665|IRF5|3663|interferon regulatory factor 5##AY693668|IRF5|3663|interferon regulatory factor 5##NM_001098629|IRF5|3663|interferon regulatory factor 5##NM_001098630|IRF5|3663|interferon regulatory factor 5##NM_001242452|IRF5|3663|interferon regulatory factor 5##DQ995492|IRF5|3663|interferon regulatory factor 5##U51127|IRF5|3663|interferon regulatory factor 5##AK297083|IRF5|3663|interferon regulatory factor 5##AY504947|IRF5|3663|interferon regulatory factor 5##AY693666|IRF5|3663|interferon regulatory factor 5##AY693667|IRF5|3663|interferon regulatory factor 5##EU258896|IRF5|3663|interferon regulatory factor 5##AY693669|IRF5|3663|interferon regulatory factor 5##BC004139|IRF5|3663|interferon regulatory factor 5##BC004201|IRF5|3663|interferon regulatory factor 5##DQ277633|IRF5|3663|interferon regulatory factor 5##NM_032643|IRF5|3663|interferon regulatory factor 5	1.171415	CTCF.p2:-8:1.000
chr10	134166258	134166366	reg1003429.p2	13.996	+	TSC_hg19_v1_chr10_+_134145696 AK098652 BC050097 AK295953 AB051461 BC029902 NM_001143757 AK097418	-20602	+	TSC_hg19_v1_chr10_+_134145617 NM_001143758 NM_001143759 NM_030626	-20698	+	TSC_hg19_v1_chr10_-_134145360 AK098366 AK308956 BC042566	-20966	-	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	44397	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	92371	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	185000	+	AK098652|LRRC27|80313|leucine rich repeat containing 27##BC050097|LRRC27|80313|leucine rich repeat containing 27##AK295953|LRRC27|80313|leucine rich repeat containing 27##AB051461|LRRC27|80313|leucine rich repeat containing 27##BC029902|LRRC27|80313|leucine rich repeat containing 27##NM_001143757|LRRC27|80313|leucine rich repeat containing 27##AK097418|LRRC27|80313|leucine rich repeat containing 27##NM_001143758|LRRC27|80313|leucine rich repeat containing 27##NM_001143759|LRRC27|80313|leucine rich repeat containing 27##NM_030626|LRRC27|80313|leucine rich repeat containing 27##AK098366|STK32C|282974|serine/threonine kinase 32C##AK308956|STK32C|282974|serine/threonine kinase 32C##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa	0.916967	CTCF.p2:-6:0.917
chr6	168299497	168299624	reg1004845.p1	13.996	+	TSC_hg19_v1_chr6_+_168227559 NM_001040000 NM_001207008 U02478 AB209420	-71894	+	AB016901 BC027853 TSC_hg19_v1_chr6_-_168197551	-102020	-	BC068592 U03399 BC063451 BC033909 BC034995 NM_004610	-501603	-	AB016902 NM_001129895	78058	-	AB012722 NM_005355 NM_030615 BC130489	119006	+	NM_001122841 AK097579	176978	-	NM_001040000|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##NM_001207008|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##U02478|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##AB209420|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##AB016901|C6orf123|26238|chromosome 6 open reading frame 123##BC027853|C6orf123|26238|chromosome 6 open reading frame 123##BC068592|TCP10|6953|t-complex 10 homolog (mouse)##U03399|TCP10|6953|t-complex 10 homolog (mouse)##BC063451|TCP10|6953|t-complex 10 homolog (mouse)##NM_004610|TCP10|6953|t-complex 10 homolog (mouse)##AB016902|HGC6.3|100128124|uncharacterized LOC100128124##NM_001129895|HGC6.3|100128124|uncharacterized LOC100128124##AB012722|KIF25|3834|kinesin family member 25##NM_005355|KIF25|3834|kinesin family member 25##NM_030615|KIF25|3834|kinesin family member 25##BC130489|KIF25|3834|kinesin family member 25##NM_001122841|FRMD1|79981|FERM domain containing 1##AK097579|FRMD1|79981|FERM domain containing 1	0.081719	
chr1	160576990	160577123	reg1003741.p1	13.995	+	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	-27768	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	-27809	-	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	-84027	-	AK314244 NM_003037 BC012602	40007	-	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	104530	-	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	132008	+	AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7	0.911183	CTCF.p2:32:0.911
chr16	68295585	68295695	reg1003306.p1	13.995	+	AB017494 TSC_hg19_v1_chr16_+_68279299 AY358425 EU832326	-16329	+	AK300596 AK074828 NM_012320 TSC_hg19_v1_chr16_+_68279275 AK296263 AK298494 AL110209 BC062605 AK001705 AK222790	-16390	+	CU688826 BC030146 BC052309 TSC_hg19_v1_chr16_-_68270026 AK025571 NM_024939	-25599	-	TSC_hg19_v1_chr16_+_68298430 NM_001076785 NM_003983 CR749291 CR749475 AK310866 BC028216	2810	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	49186	-	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	49319	+	AB017494|PLA2G15|23659|phospholipase A2, group XV##AY358425|PLA2G15|23659|phospholipase A2, group XV##EU832326|PLA2G15|23659|phospholipase A2, group XV##AK300596|PLA2G15|23659|phospholipase A2, group XV##AK074828|PLA2G15|23659|phospholipase A2, group XV##NM_012320|PLA2G15|23659|phospholipase A2, group XV##AK296263|PLA2G15|23659|phospholipase A2, group XV##AK298494|PLA2G15|23659|phospholipase A2, group XV##AL110209|PLA2G15|23659|phospholipase A2, group XV##BC062605|PLA2G15|23659|phospholipase A2, group XV##AK001705|PLA2G15|23659|phospholipase A2, group XV##AK222790|PLA2G15|23659|phospholipase A2, group XV##BC030146|ESRP2|80004|epithelial splicing regulatory protein 2##BC052309|ESRP2|80004|epithelial splicing regulatory protein 2##AK025571|ESRP2|80004|epithelial splicing regulatory protein 2##NM_024939|ESRP2|80004|epithelial splicing regulatory protein 2##NM_001076785|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##NM_003983|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749291|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749475|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK310866|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC028216|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7	0.997867	CTCF.p2:-1:0.998
chr5	140971743	140971849	reg1003070.p1	13.995	+	AL050086 TSC_hg19_v1_chr5_-_140895550	-76314	-	TSC_hg19_v1_chr5_+_140868721 BC112081 BC112083 AF152339 AF152526 NM_018929 NM_032407	-103032	+	TSC_hg19_v1_chr5_+_140864626 BC042650 AF152338 AF152525 BC101035 BC101037 BC101038 NM_018928 NM_032406 BC101036	-107112	+	AF051782 AY363395 AB384958 DQ067453 TSC_hg19_v1_chr5_-_140998497 BC117257 BC143413 BC143414	26702	-	TSC_hg19_v1_chr5_-_140998562 AB209482	26765	-	TSC_hg19_v1_chr5_-_140998564 AK304291	26768	-	AL050086|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC112081|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC112083|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152339|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152526|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_018929|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_032407|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF051782|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AY363395|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##DQ067453|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC117257|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143413|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143414|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AB209482|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AK304291|DIAPH1|1729|diaphanous homolog 1 (Drosophila)	0.960954	CTCF.p2:-18:0.961
chrX	48803131	48803266	reg1003268.p2	13.994	+	U77735 BC018111 AK312745 TSC_hg19_v1_chrX_-_48776302 AK290931 NM_006875	-26851	-	D84454 NM_001042498	-33964	-	CR450287 D88146 NM_005660 AK225508 AK290284 AK293415 AK293419 AK298484 AK299748 TSC_hg19_v1_chrX_-_48768926 BC035747 NM_001032289 AK292816	-34267	-	TSC_hg19_v1_chrX_-_48814831 BC028225	11607	-	TSC_hg19_v1_chrX_-_48814870 BC009917 NM_001136157 NM_001136158 NM_017602	11676	-	TSC_hg19_v1_chrX_-_48815168 BC098440	11933	-	U77735|PIM2|11040|pim-2 oncogene##BC018111|PIM2|11040|pim-2 oncogene##AK312745|PIM2|11040|pim-2 oncogene##AK290931|PIM2|11040|pim-2 oncogene##NM_006875|PIM2|11040|pim-2 oncogene##D84454|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001042498|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##CR450287|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##D88146|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_005660|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK225508|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK290284|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293415|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293419|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK298484|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK299748|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC035747|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001032289|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK292816|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC028225|OTUD5|55593|OTU domain containing 5##BC009917|OTUD5|55593|OTU domain containing 5##NM_001136157|OTUD5|55593|OTU domain containing 5##NM_001136158|OTUD5|55593|OTU domain containing 5##NM_017602|OTUD5|55593|OTU domain containing 5##BC098440|OTUD5|55593|OTU domain containing 5	0.980152	CTCF.p2:8:0.980
chr1	181053524	181053673	reg1004844.p1	13.993	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-50448	+	AF010446 AJ249778 BC012485 U22963 TSC_hg19_v1_chr1_+_181003139	-50459	+	AK304645 AK290374 TSC_hg19_v1_chr1_+_181003128 AK222910	-50497	+	NM_016545	4039	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	4267	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	399102	+	AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##AF010446|MR1|3140|major histocompatibility complex, class I-related##AJ249778|MR1|3140|major histocompatibility complex, class I-related##BC012485|MR1|3140|major histocompatibility complex, class I-related##U22963|MR1|3140|major histocompatibility complex, class I-related##AK304645|MR1|3140|major histocompatibility complex, class I-related##AK290374|MR1|3140|major histocompatibility complex, class I-related##AK222910|MR1|3140|major histocompatibility complex, class I-related##NM_016545|IER5|51278|immediate early response 5##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	0.066561	
chr1	41078071	41078205	reg1004992.p1	13.993	+	TSC_hg19_v1_chr1_+_40997324 BC091518	-80826	+	AK094072 NM_152373 TSC_hg19_v1_chr1_+_40997288	-80878	+	TSC_hg19_v1_chr1_+_40974438 AK021507 AK024797 AK094092 NM_022774 BC021969 AK023245	-103693	+	TSC_hg19_v1_chr1_-_41131126 BC003103	52996	-	D87074 NM_014747 TSC_hg19_v1_chr1_-_41131355	53205	-	NM_001142587 NM_001142588 NM_001142589 NM_014223 TSC_hg19_v1_chr1_+_41157288	79134	+	BC091518|ZNF684|127396|zinc finger protein 684##AK094072|ZNF684|127396|zinc finger protein 684##NM_152373|ZNF684|127396|zinc finger protein 684##AK021507|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##AK024797|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##AK094092|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##NM_022774|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##BC021969|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##AK023245|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##BC003103|RIMS3|9783|regulating synaptic membrane exocytosis 3##D87074|RIMS3|9783|regulating synaptic membrane exocytosis 3##NM_014747|RIMS3|9783|regulating synaptic membrane exocytosis 3##NM_001142587|NFYC|4802|nuclear transcription factor Y, gamma##NM_001142588|NFYC|4802|nuclear transcription factor Y, gamma##NM_001142589|NFYC|4802|nuclear transcription factor Y, gamma##NM_014223|NFYC|4802|nuclear transcription factor Y, gamma	0.987003	CTCF.p2:-9:0.987
chr2	110551749	110551882	reg1004965.p1	13.991	+	AL136868 NM_001037866 NM_001123363 NM_032260	-1481	+	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	-179870	+	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	-180090	-	NM_005054 U64675	150	+	BC094740 NM_001205288 NM_033514	104193	+	U17077 AB590150 DQ892870 DQ896118 TSC_hg19_v1_chr2_-_110873397 BC003179	321590	-	AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##U17077|MALL|7851|mal, T-cell differentiation protein-like##DQ892870|MALL|7851|mal, T-cell differentiation protein-like##DQ896118|MALL|7851|mal, T-cell differentiation protein-like##BC003179|MALL|7851|mal, T-cell differentiation protein-like	0.033659	
chr6	170190350	170190469	reg1004103.p1	13.989	+	TSC_hg19_v1_chr6_+_170151717 AK002014 AK294090 NM_018341 BC044812	-38687	+	TSC_hg19_v1_chr6_-_170151640 AF519569 NM_174910 AK023627 BC063455 BC053352	-38749	-	HQ258741 BC113639 TSC_hg19_v1_chr6_-_170151619 BC043594	-38821	-	AK314234 NM_005618 BC028096	409265	-	AK294415 TSC_hg19_v1_chr6_+_170599933	409452	+	AK311474 TSC_hg19_v1_chr6_-_170600250	409799	-	AK002014|C6orf70|55780|chromosome 6 open reading frame 70##AK294090|C6orf70|55780|chromosome 6 open reading frame 70##NM_018341|C6orf70|55780|chromosome 6 open reading frame 70##BC044812|C6orf70|55780|chromosome 6 open reading frame 70##AF519569|TCTE3|6991|t-complex-associated-testis-expressed 3##NM_174910|TCTE3|6991|t-complex-associated-testis-expressed 3##HQ258741|TCTE3|6991|t-complex-associated-testis-expressed 3##BC113639|TCTE3|6991|t-complex-associated-testis-expressed 3##AK314234|DLL1|28514|delta-like 1 (Drosophila)##NM_005618|DLL1|28514|delta-like 1 (Drosophila)##BC028096|DLL1|28514|delta-like 1 (Drosophila)##AK294415|FAM120B|84498|family with sequence similarity 120B	0.014617	
chr19	8645768	8645900	reg1003471.p1	13.988	+	TSC_hg19_v1_chr19_-_8642338 AB290178	-3436	-	TSC_hg19_v1_chr19_-_8642317 AK301166 AK310058 AB210037 AK131106 NM_012335	-3512	-	TSC_hg19_v1_chr19_-_8642306 BC028071	-3533	-	TSC_hg19_v1_chr19_-_8675585 AB209515 NM_030957	29758	-	AY248901 AK292258 BC024028 TSC_hg19_v1_chr19_-_8809146 BC045752 NM_178525	163278	-	BC137046 BC151149 NM_001004699	195518	+	AB290178|MYO1F|4542|myosin IF##AK301166|MYO1F|4542|myosin IF##AB210037|MYO1F|4542|myosin IF##AK131106|MYO1F|4542|myosin IF##NM_012335|MYO1F|4542|myosin IF##BC028071|MYO1F|4542|myosin IF##AB209515|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##NM_030957|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##AY248901|ACTL9|284382|actin-like 9##AK292258|ACTL9|284382|actin-like 9##BC024028|ACTL9|284382|actin-like 9##BC045752|ACTL9|284382|actin-like 9##NM_178525|ACTL9|284382|actin-like 9##BC137046|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##BC151149|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##NM_001004699|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1	1.987999	CTCF.p2:17:0.989	CTCF.p2:-55:0.999
chr10	92671468	92671589	reg1003291.p1	13.986	+	TSC_hg19_v1_chr10_+_92631730 NM_001104546 NM_006413 AL833628 AK296196 U77665 AK312900 AK225532 DQ893181 DQ896488	-39806	+	TSC_hg19_v1_chr10_+_92631241 BC006991	-40271	+	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	-53795	-	AB528537 DQ892852 DQ896099 AY903446 BC005191 AK290960 BC018667 TSC_hg19_v1_chr10_-_92680845	9288	-	X83703 NM_014391	9500	-	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	251234	+	NM_001104546|RPP30|10556|ribonuclease P/MRP 30kDa subunit##NM_006413|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AL833628|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK296196|RPP30|10556|ribonuclease P/MRP 30kDa subunit##U77665|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK312900|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK225532|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ893181|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ896488|RPP30|10556|ribonuclease P/MRP 30kDa subunit##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5	0.189197	
chrX	106903097	106903211	reg1003937.p1	13.986	+	AK307748 AK312706 AK316467 TSC_hg19_v1_chrX_+_106871744 AK297968 BC001605 X15331 AK223169 DQ895833 EU176362 AB464022 CU674782	-31356	+	NM_001204402 NM_002764 TSC_hg19_v1_chrX_+_106871719 D00860	-31459	+	BC033510 NM_001169154 NM_173494	-453293	+	BC018148 Z50781 NM_001015881	56499	-	CR533450 EU831656 EU831739 TSC_hg19_v1_chrX_-_106960193 AK311834 AY007119 AK127938	56975	-	AF153603 AF228339 AB025432 AF183393 BC072446 TSC_hg19_v1_chrX_-_106960293 AL110191 NM_004089 CR933650	57127	-	AK307748|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK312706|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK316467|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK297968|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC001605|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##X15331|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK223169|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##DQ895833|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##EU176362|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##NM_001204402|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##NM_002764|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##D00860|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC033510|CXorf41|139212|chromosome X open reading frame 41##NM_001169154|CXorf41|139212|chromosome X open reading frame 41##NM_173494|CXorf41|139212|chromosome X open reading frame 41##BC018148|TSC22D3|1831|TSC22 domain family, member 3##Z50781|TSC22D3|1831|TSC22 domain family, member 3##NM_001015881|TSC22D3|1831|TSC22 domain family, member 3##CR533450|TSC22D3|1831|TSC22 domain family, member 3##EU831656|TSC22D3|1831|TSC22 domain family, member 3##EU831739|TSC22D3|1831|TSC22 domain family, member 3##AK311834|TSC22D3|1831|TSC22 domain family, member 3##AY007119|TSC22D3|1831|TSC22 domain family, member 3##AK127938|TSC22D3|1831|TSC22 domain family, member 3##AF153603|TSC22D3|1831|TSC22 domain family, member 3##AF228339|TSC22D3|1831|TSC22 domain family, member 3##AB025432|TSC22D3|1831|TSC22 domain family, member 3##AF183393|TSC22D3|1831|TSC22 domain family, member 3##BC072446|TSC22D3|1831|TSC22 domain family, member 3##AL110191|TSC22D3|1831|TSC22 domain family, member 3##NM_004089|TSC22D3|1831|TSC22 domain family, member 3##CR933650|TSC22D3|1831|TSC22 domain family, member 3	0.052276	
chr10	49866439	49866558	reg1003884.p1	13.985	+	TSC_hg19_v1_chr10_-_49864302 AK055937	-2193	-	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	-53411	-	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	-256826	+	TSC_hg19_v1_chr10_+_49892917 BC034937	26392	+	AK127650 NM_020945	27017	+	NM_001006939 BC036722	255782	-	AK055937|ARHGAP22|58504|Rho GTPase activating protein 22##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22##BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##BC034937|WDFY4|57705|WDFY family member 4##AK127650|WDFY4|57705|WDFY family member 4##NM_020945|WDFY4|57705|WDFY family member 4##NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18	0.960039	CTCF.p2:-4:0.960
chr19	50009954	50010067	reg1002682.p1	13.985	+	TSC_hg19_v1_chr19_+_49999690 X06617 BC016378 BC070224 DQ893225 DQ896555	-10301	+	TSC_hg19_v1_chr19_+_49999686 AK311809 D28407	-10326	+	NM_001015 TSC_hg19_v1_chr19_+_49999653	-10363	+	NM_001136019 BC091487	5567	+	TSC_hg19_v1_chr19_+_50015917 AK075532 BX647163	5884	+	NM_004107 TSC_hg19_v1_chr19_+_50016469 AK074734	6442	+	X06617|RPS11|6205|ribosomal protein S11##BC016378|RPS11|6205|ribosomal protein S11##BC070224|RPS11|6205|ribosomal protein S11##DQ893225|RPS11|6205|ribosomal protein S11##DQ896555|RPS11|6205|ribosomal protein S11##AK311809|RPS11|6205|ribosomal protein S11##NM_001015|RPS11|6205|ribosomal protein S11##NM_001136019|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BC091487|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##AK075532|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BX647163|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##NM_004107|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##AK074734|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha	0.983307	CTCF.p2:1:0.983
chr20	30434480	30434595	reg1004248.p1	13.985	+	AF042831 BT009768 AB464535 DQ896105 EU176391 BC013408 NM_004118	-1168	-	AJ272502 BC092413 NM_033118 BX647635	-27353	+	NM_012112 TSC_hg19_v1_chr20_+_30327092 AK312549 AB024704 AF098158 AF287265 BC020207 BC004136	-107500	+	NM_001012644	23263	-	NM_177991 AK091960 CU691186	23538	-	BC056911 AK097430 NM_080611	23878	-	AF042831|FOXS1|2307|forkhead box S1##BT009768|FOXS1|2307|forkhead box S1##DQ896105|FOXS1|2307|forkhead box S1##EU176391|FOXS1|2307|forkhead box S1##BC013408|FOXS1|2307|forkhead box S1##NM_004118|FOXS1|2307|forkhead box S1##AJ272502|MYLK2|85366|myosin light chain kinase 2##BC092413|MYLK2|85366|myosin light chain kinase 2##NM_033118|MYLK2|85366|myosin light chain kinase 2##BX647635|MYLK2|85366|myosin light chain kinase 2##NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##NM_001012644|DUSP15|128853|dual specificity phosphatase 15##NM_177991|DUSP15|128853|dual specificity phosphatase 15##AK091960|DUSP15|128853|dual specificity phosphatase 15##BC056911|DUSP15|128853|dual specificity phosphatase 15##AK097430|C20orf57|83747|chromosome 20 open reading frame 57##NM_080611|DUSP15|128853|dual specificity phosphatase 15	0.915822	CTCF.p2:-1:0.916
chr22	39369696	39369859	reg1004858.p1	13.985	+	NM_001193289 NM_145699 U03891 BC126416 BC144146 CR456393 AB528063 CU012950 CU013238 HQ258100	-16167	+	TSC_hg19_v1_chr22_-_39268255 AK094829 NM_014292	-101473	-	TSC_hg19_v1_chr22_-_39268222 BC012111 AK293035	-101556	-	AK024854 NM_004900 U61084 CT841510 AB527109 AB528064 AB528855 CU012951 CU012954 CU013239 CU013242 CU691044 AY743217 EU527884	8654	+	TSC_hg19_v1_chr22_+_39410261 AK313272 AF165520 BC011739 NM_014508 BC021080	40474	+	CR456394 TSC_hg19_v1_chr22_+_39410295 AB208979 AB590057 CU012952 CU013240	40549	+	NM_001193289|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##NM_145699|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##U03891|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC126416|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC144146|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CR456393|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU012950|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU013238|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##HQ258100|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##AK094829|CBX6|23466|chromobox homolog 6##NM_014292|CBX6|23466|chromobox homolog 6##BC012111|CBX6|23466|chromobox homolog 6##AK293035|CBX6|23466|chromobox homolog 6##AK024854|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##NM_004900|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##U61084|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CT841510|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012951|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012954|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##CU013239|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU013242|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AY743217|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##EU527884|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AK313272|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AF165520|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC011739|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##NM_014508|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC021080|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	0.295613	CTCF.p2:-12:0.249
chr5	139731430	139731567	reg1004755.p1	13.985	+	M60278 BC033097 TSC_hg19_v1_chr5_-_139726189 AK222688 AK307310 AK313202 NM_001945	-5315	-	TSC_hg19_v1_chr5_-_139725861 EU832647 EU832724	-5610	-	TSC_hg19_v1_chr5_-_139682680 BC011869 BC003620 BC006202 AK223394 NM_002622	-48814	-	AF332961 NM_031467 AF336237 BC136262 BC143602 AF313465 AB032762	8308	+	TSC_hg19_v1_chr5_-_139780719 BC079833	49219	-	TSC_hg19_v1_chr5_-_139781027 BC030152	49543	-	M60278|HBEGF|1839|heparin-binding EGF-like growth factor##BC033097|HBEGF|1839|heparin-binding EGF-like growth factor##AK222688|HBEGF|1839|heparin-binding EGF-like growth factor##AK307310|HBEGF|1839|heparin-binding EGF-like growth factor##AK313202|HBEGF|1839|heparin-binding EGF-like growth factor##NM_001945|HBEGF|1839|heparin-binding EGF-like growth factor##EU832647|HBEGF|1839|heparin-binding EGF-like growth factor##EU832724|HBEGF|1839|heparin-binding EGF-like growth factor##BC011869|PFDN1|5201|prefoldin subunit 1##BC003620|PFDN1|5201|prefoldin subunit 1##BC006202|PFDN1|5201|prefoldin subunit 1##AK223394|PFDN1|5201|prefoldin subunit 1##NM_002622|PFDN1|5201|prefoldin subunit 1##AF332961|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##NM_031467|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AF336237|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##BC136262|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##BC143602|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AF313465|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AB032762|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9	0.952522	CTCF.p2:3:0.953
chr7	5598610	5598741	reg1004612.p2	13.985	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-28466	-	TSC_hg19_v1_chr7_-_5569235 BC012854 CU680416 EF095209 BC008633 DQ471327 AB385102 DQ890960 DQ894128 K00790	-29429	-	BC113036 TSC_hg19_v1_chr7_-_5568855	-29834	-	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	33763	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	33835	+	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	222547	-	X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##BC012854|ACTB|60|actin, beta##EF095209|ACTB|60|actin, beta##BC008633|ACTB|60|actin, beta##DQ471327|ACTB|60|actin, beta##DQ890960|ACTB|60|actin, beta##DQ894128|ACTB|60|actin, beta##K00790|ACTB|60|actin, beta##BC113036|ACTB|60|actin, beta##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216	0.998099	CTCF.p2:7:0.998
chr17	62398523	62398660	reg1004727.p1	13.984	+	BC040522 NM_018469 TSC_hg19_v1_chr17_-_62340654	-57937	-	TSC_hg19_v1_chr17_-_62340645 BC036672	-57944	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	-58005	-	AF177201 CU679261 TSC_hg19_v1_chr17_-_62493178 AK307801 BC009194 NM_007215	94546	-	AB451257 AB451382 BT006943 DQ890687 DQ893774 AB384902 TSC_hg19_v1_chr17_-_62502320	103692	-	TSC_hg19_v1_chr17_-_62502393 BC016027 AB209919	103791	-	BC040522|TEX2|55852|testis expressed 2##NM_018469|TEX2|55852|testis expressed 2##BC036672|TEX2|55852|testis expressed 2##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2##AF177201|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##AK307801|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##BC009194|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##NM_007215|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##AB451257|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AB451382|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##BT006943|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##DQ890687|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##DQ893774|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##BC016027|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AB209919|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	1.082613	CTCF.p2:3:0.927
chr20	39318770	39318872	reg1002939.p2	13.984	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-944	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-1727832	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-1763753	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	338673	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	338843	+	TSC_hg19_v1_chr20_+_39765861 AB210028	447041	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.353133	CTCF.p2:4:0.353
chr15	90762908	90763042	reg1004906.p1	13.983	+	TSC_hg19_v1_chr15_+_90744561 AY445887 NM_198925 AB051532 BC126438 BC144141 BC110853 AB385501 HQ258520 AK026108	-18285	+	TSC_hg19_v1_chr15_+_90728151 NM_020210 AK289991 AY358392	-34779	+	TSC_hg19_v1_chr15_-_90645713 AK312627	-117248	-	TSC_hg19_v1_chr15_-_90777138 AB451276 AB451406 AB463454 CR456955 DQ891196 DQ894379	14153	-	TSC_hg19_v1_chr15_-_90777174 BC000846 U85611 U82226	14190	-	TSC_hg19_v1_chr15_-_90777199 NM_006384	14259	-	AY445887|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_198925|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB051532|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC126438|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC144141|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC110853|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##HQ258520|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK026108|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_020210|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK289991|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY358392|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AB451276|CIB1|10519|calcium and integrin binding 1 (calmyrin)##AB451406|CIB1|10519|calcium and integrin binding 1 (calmyrin)##CR456955|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ891196|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ894379|CIB1|10519|calcium and integrin binding 1 (calmyrin)##BC000846|CIB1|10519|calcium and integrin binding 1 (calmyrin)##U85611|CIB1|10519|calcium and integrin binding 1 (calmyrin)##U82226|CIB1|10519|calcium and integrin binding 1 (calmyrin)##NM_006384|CIB1|10519|calcium and integrin binding 1 (calmyrin)	0.999373	CTCF.p2:-1:0.999
chr18	46201745	46201878	reg1004984.p1	13.983	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-136038	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-266102	-	AM988836 AK296709 NM_001039360 EF120357	-538112	-	AK131394 NM_001190823	267336	-	AK301535 NM_001190822	273891	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	274956	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.998742	CTCF.p2:-21:0.999
chr2	208937129	208937251	reg1004326.p1	13.983	+	TSC_hg19_v1_chr2_-_208890252 BX648983 NM_001080475	-46926	-	U43318 AB043702 NM_003468	-303094	-	TSC_hg19_v1_chr2_+_208576466 BC067253	-360690	+	HQ258094 U66583 BC117338 BC117340 NM_006891	52006	-	AB590655 U66582 BC074954 BC074955 NM_020989	57290	-	BC074944 BC074945 BC117384 BC117388 NM_005210	73686	-	BX648983|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##NM_001080475|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##U43318|FZD5|7855|frizzled family receptor 5##AB043702|FZD5|7855|frizzled family receptor 5##NM_003468|FZD5|7855|frizzled family receptor 5##BC067253|CCNYL1|151195|cyclin Y-like 1##HQ258094|CRYGD|1421|crystallin, gamma D##U66583|CRYGD|1421|crystallin, gamma D##BC117338|CRYGD|1421|crystallin, gamma D##BC117340|CRYGD|1421|crystallin, gamma D##NM_006891|CRYGD|1421|crystallin, gamma D##U66582|CRYGC|1420|crystallin, gamma C##BC074954|CRYGC|1420|crystallin, gamma C##BC074955|CRYGC|1420|crystallin, gamma C##NM_020989|CRYGC|1420|crystallin, gamma C##BC074944|CRYGB|1419|crystallin, gamma B##BC074945|CRYGB|1419|crystallin, gamma B##BC117384|CRYGB|1419|crystallin, gamma B##BC117388|CRYGB|1419|crystallin, gamma B##NM_005210|CRYGB|1419|crystallin, gamma B	0.989376	CTCF.p2:10:0.989
chr17	73500505	73500615	reg1003037.p2	13.982	+	AK316060 TSC_hg19_v1_chr17_+_73472617 AK294526 CR936809	-27958	+	NM_014738 TSC_hg19_v1_chr17_+_73452737 AK308160 BC042942 AK304819 D83779 BC045540	-47822	+	NM_002086 NM_203506 TSC_hg19_v1_chr17_-_73401791	-98757	-	AK300354 NM_001142643 AK315936	5381	-	TSC_hg19_v1_chr17_-_73511556 AF451976 BC032359	10975	-	BC066643 NM_020753 TSC_hg19_v1_chr17_-_73511632	11079	-	AK316060|KIAA0195|9772|KIAA0195##AK294526|KIAA0195|9772|KIAA0195##CR936809|KIAA0195|9772|KIAA0195##NM_014738|KIAA0195|9772|KIAA0195##AK308160|KIAA0195|9772|KIAA0195##BC042942|KIAA0195|9772|KIAA0195##AK304819|KIAA0195|9772|KIAA0195##D83779|KIAA0195|9772|KIAA0195##BC045540|KIAA0195|9772|KIAA0195##NM_002086|GRB2|2885|growth factor receptor-bound protein 2##NM_203506|GRB2|2885|growth factor receptor-bound protein 2##AK300354|CASKIN2|57513|CASK interacting protein 2##NM_001142643|CASKIN2|57513|CASK interacting protein 2##AK315936|CASKIN2|57513|CASK interacting protein 2##AF451976|CASKIN2|57513|CASK interacting protein 2##BC032359|CASKIN2|57513|CASK interacting protein 2##BC066643|CASKIN2|57513|CASK interacting protein 2##NM_020753|CASKIN2|57513|CASK interacting protein 2	0.999094	CTCF.p2:-9:0.999
chr10	104489127	104489255	reg1002454.p1	13.980	+	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	-14846	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	-15094	-	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	-84907	+	TSC_hg19_v1_chr10_+_104503704 AK300871	14479	+	TSC_hg19_v1_chr10_+_104503723 AK308843 AK316452	14526	+	TSC_hg19_v1_chr10_+_104503724 NM_001083913	14534	+	BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##AK300871|C10orf26|54838|chromosome 10 open reading frame 26##AK308843|C10orf26|54838|chromosome 10 open reading frame 26##AK316452|C10orf26|54838|chromosome 10 open reading frame 26##NM_001083913|C10orf26|54838|chromosome 10 open reading frame 26	0.601737	CTCF.p2:-2:0.602
chr4	40327551	40327679	reg1003636.p1	13.980	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-128974	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-269083	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-348022	-	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	9830	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	188969	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	190343	-	NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47	0.533502	CTCF.p2:10:0.534
chr3	4039967	4040107	reg1004748.p1	13.979	+	TSC_hg19_v1_chr3_+_3841114 NM_020873	-198938	+	TSC_hg19_v1_chr3_-_3221401 NM_001173482 NM_016302	-818636	-	TSC_hg19_v1_chr3_-_3221386 AK301423	-818651	-	AK307537 NM_001243723 NM_006515 TSC_hg19_v1_chr3_+_4345015	304971	+	TSC_hg19_v1_chr3_+_4345048 AK222734 AK297865 AK302296 AB590082 AF054989 BC011635 BC008931 U80776 AY952295 CU679994	305026	+	AY208752 AY323910 AK057983 TSC_hg19_v1_chr3_-_4508936 AK302018 AB448737 BC110862	468895	-	NM_020873|LRRN1|57633|leucine rich repeat neuronal 1##NM_001173482|CRBN|51185|cereblon##NM_016302|CRBN|51185|cereblon##AK301423|CRBN|51185|cereblon##AK307537|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_001243723|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_006515|SETMAR|6419|SET domain and mariner transposase fusion gene##AK222734|SETMAR|6419|SET domain and mariner transposase fusion gene##AK297865|SETMAR|6419|SET domain and mariner transposase fusion gene##AK302296|SETMAR|6419|SET domain and mariner transposase fusion gene##AF054989|SETMAR|6419|SET domain and mariner transposase fusion gene##BC011635|SETMAR|6419|SET domain and mariner transposase fusion gene##BC008931|SETMAR|6419|SET domain and mariner transposase fusion gene##U80776|SETMAR|6419|SET domain and mariner transposase fusion gene##AY952295|SETMAR|6419|SET domain and mariner transposase fusion gene##AY208752|SUMF1|285362|sulfatase modifying factor 1##AY323910|SUMF1|285362|sulfatase modifying factor 1##AK057983|SUMF1|285362|sulfatase modifying factor 1##AK302018|SUMF1|285362|sulfatase modifying factor 1##AB448737|SUMF1|285362|sulfatase modifying factor 1##BC110862|SUMF1|285362|sulfatase modifying factor 1	0.991288	CTCF.p2:1:0.991
chr9	79062544	79062664	reg1002542.p1	13.979	+	AY196293 NM_001097634	-6023	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	-53213	-	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	-556969	+	NM_001097633 NM_001490 TSC_hg19_v1_chr9_+_79074142 AY196294 AY196295 AL832647	11512	+	AY196296 NM_001097635	30652	+	AY196297 NM_001097636	52944	+	AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_001097633|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001490|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196294|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196295|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AL832647|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196297|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097636|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.564103	CTCF.p2:-24:0.564
chr20	33461964	33462094	reg1004839.p1	13.978	+	TSC_hg19_v1_chr20_-_33460644 AY138815 BC040030 AK124788 AK098355 BC101371 BC141843 BC101370 BC101372 AK299494 BC033745 NM_178026	-1404	-	TSC_hg19_v1_chr20_-_33413434 BC069829 BC035676 NM_001242539 NM_014071 BC047886	-48615	-	AL122050 TSC_hg19_v1_chr20_+_33299806	-162236	+	NM_001242393 TSC_hg19_v1_chr20_+_33462793 AK000162	773	+	NM_001076552 NM_018677 TSC_hg19_v1_chr20_+_33464382 AK000188 AK025990 AK098026 AK293634	2332	+	BC012172 TSC_hg19_v1_chr20_+_33464414 AK092281 AF263614 BC073846	2454	+	AY138815|GGT7|2686|gamma-glutamyltransferase 7##BC040030|GGT7|2686|gamma-glutamyltransferase 7##AK124788|GGT7|2686|gamma-glutamyltransferase 7##BC101371|GGT7|2686|gamma-glutamyltransferase 7##BC141843|GGT7|2686|gamma-glutamyltransferase 7##BC101370|GGT7|2686|gamma-glutamyltransferase 7##BC101372|GGT7|2686|gamma-glutamyltransferase 7##AK299494|GGT7|2686|gamma-glutamyltransferase 7##BC033745|GGT7|2686|gamma-glutamyltransferase 7##NM_178026|GGT7|2686|gamma-glutamyltransferase 7##BC069829|NCOA6|23054|nuclear receptor coactivator 6##BC035676|NCOA6|23054|nuclear receptor coactivator 6##NM_001242539|NCOA6|23054|nuclear receptor coactivator 6##NM_014071|NCOA6|23054|nuclear receptor coactivator 6##BC047886|NCOA6|23054|nuclear receptor coactivator 6##AL122050|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##NM_001242393|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK000162|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##NM_001076552|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##NM_018677|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK000188|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK025990|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK098026|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK293634|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##BC012172|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK092281|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AF263614|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##BC073846|ACSS2|55902|acyl-CoA synthetase short-chain family member 2	0.490917	CTCF.p2:-6:0.491
chr8	42243065	42243192	reg1003188.p1	13.977	+	AB017788 BC107046 BC107047 AF177397 NM_014420 AK311714 AK301609	-8476	-	NM_002690 AK223537 TSC_hg19_v1_chr8_+_42196014 BC100288 AK294025 AK314976 D29013 M13140 BC106909 AB464039 CR536503 CR541802 L11607	-47071	+	BC090865 TSC_hg19_v1_chr8_+_42128868 AF080158 AK298241 AB209090 BC108694 AK290952 BC144080 BX648165	-114213	+	NM_001135694 NM_005662 TSC_hg19_v1_chr8_+_42249355	6190	+	TSC_hg19_v1_chr8_+_42249386 AF038962	6259	+	TSC_hg19_v1_chr8_+_42249394 AK307224 AK058201 AK308760 BC056870 BC002456	6283	+	AB017788|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##BC107046|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##BC107047|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##AF177397|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##NM_014420|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##AK301609|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##NM_002690|POLB|5423|polymerase (DNA directed), beta##AK223537|POLB|5423|polymerase (DNA directed), beta##BC100288|POLB|5423|polymerase (DNA directed), beta##AK294025|POLB|5423|polymerase (DNA directed), beta##AK314976|POLB|5423|polymerase (DNA directed), beta##D29013|POLB|5423|polymerase (DNA directed), beta##M13140|POLB|5423|polymerase (DNA directed), beta##BC106909|POLB|5423|polymerase (DNA directed), beta##CR536503|POLB|5423|polymerase (DNA directed), beta##CR541802|POLB|5423|polymerase (DNA directed), beta##L11607|POLB|5423|polymerase (DNA directed), beta##BC090865|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AF080158|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK298241|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AB209090|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC108694|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK290952|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC144080|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BX648165|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001135694|VDAC3|7419|voltage-dependent anion channel 3##NM_005662|VDAC3|7419|voltage-dependent anion channel 3##AF038962|VDAC3|7419|voltage-dependent anion channel 3##AK307224|VDAC3|7419|voltage-dependent anion channel 3##AK058201|VDAC3|7419|voltage-dependent anion channel 3##AK308760|VDAC3|7419|voltage-dependent anion channel 3##BC056870|VDAC3|7419|voltage-dependent anion channel 3	0.984283	CTCF.p2:18:0.984
chr3	45079312	45079451	reg1003506.p1	13.976	+	AK312093 NM_003278 X64559 TSC_hg19_v1_chr3_+_45067794 BC011024 CU679874 CR541981 CR542009	-11579	+	TSC_hg19_v1_chr3_+_45017751 BC012831 AB384439 D29958	-61621	+	TSC_hg19_v1_chr3_+_45017742 AK315741 NM_015004 AK295779	-61644	+	AB527383 CU676820 TSC_hg19_v1_chr3_-_45187791	108405	-	TSC_hg19_v1_chr3_-_45187849 AY375452 AY026461	108470	-	TSC_hg19_v1_chr3_-_45187871 BC069254 AY167484 AY358779 AK314441 AF468010 AK026622	108494	-	AK312093|CLEC3B|7123|C-type lectin domain family 3, member B##NM_003278|CLEC3B|7123|C-type lectin domain family 3, member B##X64559|CLEC3B|7123|C-type lectin domain family 3, member B##BC011024|CLEC3B|7123|C-type lectin domain family 3, member B##CR541981|CLEC3B|7123|C-type lectin domain family 3, member B##CR542009|CLEC3B|7123|C-type lectin domain family 3, member B##BC012831|EXOSC7|23016|exosome component 7##D29958|EXOSC7|23016|exosome component 7##AK315741|EXOSC7|23016|exosome component 7##NM_015004|EXOSC7|23016|exosome component 7##AK295779|EXOSC7|23016|exosome component 7##AY375452|CDCP1|64866|CUB domain containing protein 1##AY026461|CDCP1|64866|CUB domain containing protein 1##BC069254|CDCP1|64866|CUB domain containing protein 1##AY167484|CDCP1|64866|CUB domain containing protein 1##AY358779|CDCP1|64866|CUB domain containing protein 1##AK314441|CDCP1|64866|CUB domain containing protein 1##AF468010|CDCP1|64866|CUB domain containing protein 1##AK026622|CDCP1|64866|CUB domain containing protein 1	1.904105	CTCF.p2:34:0.907	CTCF.p2:-60:0.998
chr2	133929104	133929232	reg1004793.p1	13.974	+	AK124659 TSC_hg19_v1_chr2_-_133539761	-389474	-	NM_001077427 AK309668	-500058	-	NM_144586	-500688	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	250186	-	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	396870	-	NM_002410 D17716 AF113921	1082717	+	AK124659|NCKAP5|344148|NCK-associated protein 5##NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1##AK309668|LYPD1|116372|LY6/PLAUR domain containing 1##NM_144586|LYPD1|116372|LY6/PLAUR domain containing 1##AK092189|NCKAP5|344148|NCK-associated protein 5##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase	0.966021	CTCF.p2:5:0.966
chr11	45676922	45677033	reg1003601.p1	13.973	+	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	-369227	-	AF275818 NM_020229	-561414	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	-704560	-	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	10207	-	NM_001145265 NM_001145266	148645	+	TSC_hg19_v1_chr11_+_45825944 AK225428 AK002182 AK091245	148937	+	AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1##AK225428|SLC35C1|55343|solute carrier family 35, member C1##AK002182|SLC35C1|55343|solute carrier family 35, member C1##AK091245|SLC35C1|55343|solute carrier family 35, member C1	0.998131	CTCF.p2:7:0.998
chr1	151906608	151906746	reg1004822.p1	13.973	+	AK289494 NM_053055	-24317	-	TSC_hg19_v1_chr1_-_151881988 BC065277	-24676	-	TSC_hg19_v1_chr1_-_151881935 AK314852 AJ313515 BC017339	-24750	-	M81457 TSC_hg19_v1_chr1_-_151966289 BC105786 M38591	59610	-	BC015973 AK291073 TSC_hg19_v1_chr1_-_151966307 D28387	59641	-	NM_002966	60036	-	AK289494|THEM4|117145|thioesterase superfamily member 4##NM_053055|THEM4|117145|thioesterase superfamily member 4##BC065277|THEM4|117145|thioesterase superfamily member 4##AK314852|THEM4|117145|thioesterase superfamily member 4##AJ313515|THEM4|117145|thioesterase superfamily member 4##BC017339|THEM4|117145|thioesterase superfamily member 4##M81457|S100A10|6281|S100 calcium binding protein A10##BC105786|S100A10|6281|S100 calcium binding protein A10##M38591|S100A10|6281|S100 calcium binding protein A10##BC015973|S100A10|6281|S100 calcium binding protein A10##AK291073|S100A10|6281|S100 calcium binding protein A10##D28387|S100A10|6281|S100 calcium binding protein A10##NM_002966|S100A10|6281|S100 calcium binding protein A10	0.826471	CTCF.p2:-13:0.826
chr14	78328668	78328797	reg1005192.p1	13.973	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-62282	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-101223	-	NM_001173978 NM_174943 BC107147 BC113929 BC113986	-101488	+	AB018286 BC152457 NM_004796	541360	+	NM_001105250 NM_138970 AK056530 BC059368 BC068469	1416972	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	2349172	-	NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001173978|C14orf178|283579|chromosome 14 open reading frame 178##NM_174943|C14orf178|283579|chromosome 14 open reading frame 178##BC107147|C14orf178|283579|chromosome 14 open reading frame 178##BC113929|C14orf178|283579|chromosome 14 open reading frame 178##BC113986|C14orf178|283579|chromosome 14 open reading frame 178##AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II	0.998392	CTCF.p2:-4:0.998
chr18	71863739	71863870	reg1002194.p2	13.973	+	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	-48010	+	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	-48777	-	AF448838 BC050329 NM_001201465 NM_138966	-1328995	-	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	95375	-	CR749350 NM_001174123	119305	+	TSC_hg19_v1_chr18_-_72124545 NM_001044369	260725	-	NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15##AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)##CR749350|C18orf63|644041|chromosome 18 open reading frame 63##NM_001174123|C18orf63|644041|chromosome 18 open reading frame 63##NM_001044369|FAM69C|125704|family with sequence similarity 69, member C	1.473063	CTCF.p2:0:0.999	CTCF.p2:-98:0.474
chr7	30315858	30315990	reg1004083.p1	13.973	+	TSC_hg19_v1_chr7_+_30174621 NM_152793 AK096533 AL834391 AK098769 AB528783 AK294982	-141342	+	TSC_hg19_v1_chr7_+_30068250 BC002838 AF308300 AF380162 DQ893498 DQ896458 CU678236	-247633	+	TSC_hg19_v1_chr7_+_30068010 NM_001197026 NM_001197027 NM_032639 AK294857 BC053990 AK023180	-247923	+	AF513707 NM_147128	7998	+	TSC_hg19_v1_chr7_+_30324515 AF527533	8625	+	TSC_hg19_v1_chr7_+_30324634 AY054122	8732	+	NM_152793|C7orf41|222166|chromosome 7 open reading frame 41##AK096533|C7orf41|222166|chromosome 7 open reading frame 41##AL834391|C7orf41|222166|chromosome 7 open reading frame 41##AK098769|C7orf41|222166|chromosome 7 open reading frame 41##AK294982|C7orf41|222166|chromosome 7 open reading frame 41##BC002838|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF308300|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF380162|PLEKHA8P1|51054|pleckstrin homology domain containing, family A member 8 pseudogene 1##DQ893498|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##DQ896458|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197026|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197027|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_032639|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK294857|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##BC053990|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK023180|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF513707|ZNRF2|223082|zinc and ring finger 2##NM_147128|ZNRF2|223082|zinc and ring finger 2##AF527533|ZNRF2|223082|zinc and ring finger 2##AY054122|ZNRF2|223082|zinc and ring finger 2	0.246458	CTCF.p2:-8:0.246
chr17	62384359	62384499	reg1004977.p1	13.972	+	BC040522 NM_018469 TSC_hg19_v1_chr17_-_62340654	-43775	-	TSC_hg19_v1_chr17_-_62340645 BC036672	-43782	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	-43843	-	AF177201 CU679261 TSC_hg19_v1_chr17_-_62493178 AK307801 BC009194 NM_007215	108708	-	AB451257 AB451382 BT006943 DQ890687 DQ893774 AB384902 TSC_hg19_v1_chr17_-_62502320	117854	-	TSC_hg19_v1_chr17_-_62502393 BC016027 AB209919	117953	-	BC040522|TEX2|55852|testis expressed 2##NM_018469|TEX2|55852|testis expressed 2##BC036672|TEX2|55852|testis expressed 2##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2##AF177201|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##AK307801|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##BC009194|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##NM_007215|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##AB451257|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AB451382|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##BT006943|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##DQ890687|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##DQ893774|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##BC016027|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AB209919|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	0.998898	CTCF.p2:-6:0.951
chr2	120022846	120022978	reg1002987.p1	13.972	+	TSC_hg19_v1_chr2_+_119981409 AF423424 AK001691 AY029585 AY214461 BX538047 AK291608 AF238864 AF262322 AY082673 BC095421 BC042150	-41485	+	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	-41527	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	-106508	-	BC126395 BC126397 BC144012 BC144014 BC171737 NM_001017927 TSC_hg19_v1_chr2_-_120124372 BC047365 BC105805	101426	-	NM_001079862 TSC_hg19_v1_chr2_+_120124552 FM213122 FM213123 FM213124 FM213125 FM213126 FM213128 NM_001178041 NM_001178042 NM_001178043 NM_020548	101617	+	TSC_hg19_v1_chr2_+_120124566 M15887 BC006466	101672	+	AF423424|STEAP3|55240|STEAP family member 3, metalloreductase##AK001691|STEAP3|55240|STEAP family member 3, metalloreductase##AY029585|STEAP3|55240|STEAP family member 3, metalloreductase##AY214461|STEAP3|55240|STEAP family member 3, metalloreductase##BX538047|STEAP3|55240|STEAP family member 3, metalloreductase##AK291608|STEAP3|55240|STEAP family member 3, metalloreductase##AF238864|STEAP3|55240|STEAP family member 3, metalloreductase##AF262322|STEAP3|55240|STEAP family member 3, metalloreductase##AY082673|STEAP3|55240|STEAP family member 3, metalloreductase##BC095421|STEAP3|55240|STEAP family member 3, metalloreductase##BC042150|STEAP3|55240|STEAP family member 3, metalloreductase##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##BC126395|C2orf76|130355|chromosome 2 open reading frame 76##BC126397|C2orf76|130355|chromosome 2 open reading frame 76##BC144012|C2orf76|130355|chromosome 2 open reading frame 76##BC144014|C2orf76|130355|chromosome 2 open reading frame 76##BC171737|C2orf76|130355|chromosome 2 open reading frame 76##NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76##BC047365|C2orf76|130355|chromosome 2 open reading frame 76##BC105805|C2orf76|130355|chromosome 2 open reading frame 76##NM_001079862|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213122|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213123|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213124|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213125|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213126|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213128|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178041|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178042|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178043|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_020548|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##M15887|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##BC006466|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)	0.996562	CTCF.p2:11:0.997
chrX	134320119	134320247	reg1003401.p2	13.972	+	AF520814 AY352211 NM_001031705 NM_017863	-14433	-	AK123302 TSC_hg19_v1_chrX_-_134232743	-87448	-	BC008096 TSC_hg19_v1_chrX_-_134186208 BC071991 AL117556 BC000393 BC019300 NM_001078172 NM_001134321	-134054	-	AK091687 AX747129 NM_001185063 NM_007131 AK290215	109789	-	TSC_hg19_v1_chrX_-_134478038 AL831984 BC029787	157820	-	AY927530 NM_152695 TSC_hg19_v1_chrX_+_134478720 AK314344 AK074194 AL833407 AY280801 BC060768 BC065938 AL833109	158541	+	AF520814|CXorf48|54967|chromosome X open reading frame 48##AY352211|CXorf48|54967|chromosome X open reading frame 48##NM_001031705|CXorf48|54967|chromosome X open reading frame 48##NM_017863|CXorf48|54967|chromosome X open reading frame 48##AK123302|LINC00087|644596|long intergenic non-protein coding RNA 87##BC008096|FAM127B|26071|family with sequence similarity 127, member B##BC071991|FAM127B|26071|family with sequence similarity 127, member B##AL117556|FAM127B|26071|family with sequence similarity 127, member B##BC000393|FAM127B|26071|family with sequence similarity 127, member B##BC019300|FAM127B|26071|family with sequence similarity 127, member B##NM_001078172|FAM127B|26071|family with sequence similarity 127, member B##NM_001134321|FAM127B|26071|family with sequence similarity 127, member B##AK091687|ZNF75D|7626|zinc finger protein 75D##NM_001185063|ZNF75D|7626|zinc finger protein 75D##NM_007131|ZNF75D|7626|zinc finger protein 75D##AK290215|ZNF75D|7626|zinc finger protein 75D##AL831984|ZNF75D|7626|zinc finger protein 75D##BC029787|ZNF75D|7626|zinc finger protein 75D##AY927530|ZNF449|203523|zinc finger protein 449##NM_152695|ZNF449|203523|zinc finger protein 449##AK314344|ZNF449|203523|zinc finger protein 449##AK074194|ZNF449|203523|zinc finger protein 449##AL833407|ZNF449|203523|zinc finger protein 449##AY280801|ZNF449|203523|zinc finger protein 449##BC060768|ZNF449|203523|zinc finger protein 449##BC065938|ZNF449|203523|zinc finger protein 449##AL833109|ZNF449|203523|zinc finger protein 449	0.0	
chr16	4598882	4598999	reg1004208.p1	13.971	+	TSC_hg19_v1_chr16_-_4588775 BC002882 AK292036 AK302297 AL136698 AK294257 DQ167023 NM_001199055 NM_001199056 NM_013399 AK307067 AK308532	-10148	-	TSC_hg19_v1_chr16_-_4588442 AF195661 AL833853 NM_001199054	-10503	-	AK311295 BC007604 TSC_hg19_v1_chr16_-_4563123	-35889	-	NM_001145011	7550	+	TSC_hg19_v1_chr16_-_4664870 CU687554 AF370434 BC012018 AK055785 BC025327 BC008681	65894	-	TSC_hg19_v1_chr16_-_4664901 BC062534 NM_145253	65993	-	BC002882|C16orf5|29965|chromosome 16 open reading frame 5##AK292036|C16orf5|29965|chromosome 16 open reading frame 5##AK302297|C16orf5|29965|chromosome 16 open reading frame 5##AL136698|C16orf5|29965|chromosome 16 open reading frame 5##AK294257|C16orf5|29965|chromosome 16 open reading frame 5##DQ167023|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199055|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199056|C16orf5|29965|chromosome 16 open reading frame 5##NM_013399|C16orf5|29965|chromosome 16 open reading frame 5##AK307067|C16orf5|29965|chromosome 16 open reading frame 5##AK308532|C16orf5|29965|chromosome 16 open reading frame 5##AF195661|C16orf5|29965|chromosome 16 open reading frame 5##AL833853|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199054|C16orf5|29965|chromosome 16 open reading frame 5##AK311295|C16orf5|29965|chromosome 16 open reading frame 5##BC007604|C16orf5|29965|chromosome 16 open reading frame 5##NM_001145011|C16orf96|342346|chromosome 16 open reading frame 96##AF370434|FAM100A|124402|family with sequence similarity 100, member A##BC012018|FAM100A|124402|family with sequence similarity 100, member A##AK055785|FAM100A|124402|family with sequence similarity 100, member A##BC025327|FAM100A|124402|family with sequence similarity 100, member A##BC008681|FAM100A|124402|family with sequence similarity 100, member A##BC062534|FAM100A|124402|family with sequence similarity 100, member A##NM_145253|FAM100A|124402|family with sequence similarity 100, member A	0.999822	CTCF.p2:-4:1.000
chr20	5081522	5081632	reg1003158.p2	13.970	+	BC013112 AF164142 NM_203327	-90652	-	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	-99417	-	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	-277383	-	TSC_hg19_v1_chr20_-_5093685 AY359115 BC015113 AK055700 BC110408 BC011990 BC009768 BC009770 AF161392 BC009769 AK315606 BC066317 AK309823 BC070212 NM_001009923 NM_001009924 NM_001009925 NM_014145	12038	-	CR536501 CR541799 AB464071 DQ891403 DQ894581 M15796 TSC_hg19_v1_chr20_-_5100605 BC000491 BC062439 D28458 AK313286 M29310 NM_182649	18978	-	AK300558 AK311014 NM_002592	25649	-	BC013112|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AF164142|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_203327|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY359115|C20orf30|29058|chromosome 20 open reading frame 30##BC015113|C20orf30|29058|chromosome 20 open reading frame 30##AK055700|C20orf30|29058|chromosome 20 open reading frame 30##BC110408|C20orf30|29058|chromosome 20 open reading frame 30##BC011990|C20orf30|29058|chromosome 20 open reading frame 30##BC009768|C20orf30|29058|chromosome 20 open reading frame 30##BC009770|C20orf30|29058|chromosome 20 open reading frame 30##AF161392|C20orf30|29058|chromosome 20 open reading frame 30##BC009769|C20orf30|29058|chromosome 20 open reading frame 30##AK315606|C20orf30|29058|chromosome 20 open reading frame 30##BC066317|C20orf30|29058|chromosome 20 open reading frame 30##AK309823|C20orf30|29058|chromosome 20 open reading frame 30##BC070212|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009923|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009924|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009925|C20orf30|29058|chromosome 20 open reading frame 30##NM_014145|C20orf30|29058|chromosome 20 open reading frame 30##CR536501|PCNA|5111|proliferating cell nuclear antigen##CR541799|PCNA|5111|proliferating cell nuclear antigen##DQ891403|PCNA|5111|proliferating cell nuclear antigen##DQ894581|PCNA|5111|proliferating cell nuclear antigen##M15796|PCNA|5111|proliferating cell nuclear antigen##BC000491|PCNA|5111|proliferating cell nuclear antigen##BC062439|PCNA|5111|proliferating cell nuclear antigen##D28458|PCNA|5111|proliferating cell nuclear antigen##AK313286|PCNA|5111|proliferating cell nuclear antigen##NM_182649|PCNA|5111|proliferating cell nuclear antigen##AK300558|PCNA|5111|proliferating cell nuclear antigen##NM_002592|PCNA|5111|proliferating cell nuclear antigen	0.999241	CTCF.p2:1:0.999
chr22	46751434	46751546	reg1003030.p1	13.970	+	TSC_hg19_v1_chr22_+_46731810 AK303020	-19680	+	TSC_hg19_v1_chr22_+_46731615 AB178028 AK001002 AK295173 AK290712 BC066593 BC080631 CR456445 BC027991 BC012076 AB463324 CU013043 CU013331	-19861	+	NM_018006 AY062123 DQ309998 DQ309999 DQ310000	-20181	+	AF231024 NM_014246 TSC_hg19_v1_chr22_-_46933142	181624	-	CR456470 NM_015124 BC129837 AB463563 CU013020 CU013308	271186	+	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	382589	-	AK303020|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AB178028|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK001002|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK295173|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK290712|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC066593|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC080631|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456445|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC027991|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC012076|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013043|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013331|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##NM_018006|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AY062123|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ309998|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ309999|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ310000|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AF231024|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##NM_014246|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##CR456470|GRAMD4|23151|GRAM domain containing 4##NM_015124|GRAMD4|23151|GRAM domain containing 4##BC129837|GRAMD4|23151|GRAM domain containing 4##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase	0.999858	CTCF.p2:-15:1.000
chr14	55737896	55738050	reg1004273.p1	13.969	+	TSC_hg19_v1_chr14_-_55658298 BX248255 D13633 AK291847 AK299338 BC010658 AK297480 AB076695 NM_001146015 NM_014750	-79673	-	TSC_hg19_v1_chr14_-_55650349 BT007344	-87567	-	TSC_hg19_v1_chr14_+_55595969 AB006780 BC053667 BC068068 M36682 BC001120 M35368 M57710	-141988	+	NM_017943 AK092879 AX747787 TSC_hg19_v1_chr14_+_55738097 BC109120 BC109121	86	+	TSC_hg19_v1_chr14_+_55738114 BX248268 BC095482	185	+	NM_152231	898	+	BX248255|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##D13633|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK291847|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK299338|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##BC010658|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK297480|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AB076695|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_001146015|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_014750|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AB006780|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC053667|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC068068|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M36682|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC001120|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M35368|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M57710|LGALS3|3958|lectin, galactoside-binding, soluble, 3##NM_017943|FBXO34|55030|F-box protein 34##AK092879|FBXO34|55030|F-box protein 34##BC109120|FBXO34|55030|F-box protein 34##BC109121|FBXO34|55030|F-box protein 34##BX248268|FBXO34|55030|F-box protein 34##BC095482|FBXO34|55030|F-box protein 34##NM_152231|FBXO34|55030|F-box protein 34	1.210934	CTCF.p2:28:0.995	CTCF.p2:-38:0.215
chr2	169203281	169203402	reg1003074.p1	13.969	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	-99268	-	NM_020981	-528160	+	EF119711 EF119717 NM_001199144 NM_001199145	-1159549	+	TSC_hg19_v1_chr2_+_169312764 AK172775	109418	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	109534	+	AK093444 AX748130 NM_001171631	439707	+	BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##AK172775|CERS6|253782|ceramide synthase 6##NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6##AK093444|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171631|NOSTRIN|115677|nitric oxide synthase trafficker	0.575253	CTCF.p2:-20:0.575
chrX	39673780	39673910	reg1005099.p1	13.969	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-1010305	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-1010385	+	BC008908 NM_021242	-1010773	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	282847	-	BC114220 NM_001123383 NM_001123384	362736	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	766341	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.989247	CTCF.p2:1:0.989
chr10	2970583	2970716	reg1004167.p1	13.967	+	AF034837 NM_018702	-1190980	-	TSC_hg19_v1_chr10_+_1102822 AK292591	-1867823	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-1867880	+	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	139098	+	AK092597 AX747622 NM_001242339	140169	+	BC021698 TSC_hg19_v1_chr10_+_3151628	180963	+	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet##BC021698|PFKP|5214|phosphofructokinase, platelet	0.992095	CTCF.p2:-14:0.992
chr3	78708683	78708826	reg1004258.p1	13.967	+	TSC_hg19_v1_chr3_-_78666943 AK025535	-41769	-	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-1619474	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-2874052	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	359833	-	NM_002941	1108304	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	3101943	-	AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK123776|ZNF717|100131827|zinc finger protein 717##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.99936	CTCF.p2:-21:0.999
chr5	150544475	150544599	reg1003187.p2	13.967	+	TSC_hg19_v1_chr5_-_150537341 NM_001155	-7149	-	TSC_hg19_v1_chr5_-_150537327 AK126836 AK290672 AK130077 Y00097 AK298582	-7218	-	J03578 BC017046 TSC_hg19_v1_chr5_-_150537299	-7256	-	TSC_hg19_v1_chr5_-_150603648 AK225826	59094	-	TSC_hg19_v1_chr5_-_150603654 AK292841 AK298063 AL713742 NM_015621	59143	-	NM_000405 NM_001167607 TSC_hg19_v1_chr5_+_150632745 AK225978 L01439 M76477 AK312494 X62078 AK298867 BC009273 X61095 CU679281 DQ891914 DQ895098 X16087	88178	+	NM_001155|ANXA6|309|annexin A6##AK126836|ANXA6|309|annexin A6##AK290672|ANXA6|309|annexin A6##AK130077|ANXA6|309|annexin A6##Y00097|ANXA6|309|annexin A6##AK298582|ANXA6|309|annexin A6##J03578|ANXA6|309|annexin A6##BC017046|ANXA6|309|annexin A6##AK225826|CCDC69|26112|coiled-coil domain containing 69##AK292841|CCDC69|26112|coiled-coil domain containing 69##AK298063|CCDC69|26112|coiled-coil domain containing 69##AL713742|CCDC69|26112|coiled-coil domain containing 69##NM_015621|CCDC69|26112|coiled-coil domain containing 69##NM_000405|GM2A|2760|GM2 ganglioside activator##NM_001167607|GM2A|2760|GM2 ganglioside activator##L01439|GM2A|2760|GM2 ganglioside activator##M76477|GM2A|2760|GM2 ganglioside activator##AK312494|GM2A|2760|GM2 ganglioside activator##X62078|GM2A|2760|GM2 ganglioside activator##AK298867|GM2A|2760|GM2 ganglioside activator##BC009273|GM2A|2760|GM2 ganglioside activator##X61095|GM2A|2760|GM2 ganglioside activator##DQ891914|GM2A|2760|GM2 ganglioside activator##DQ895098|GM2A|2760|GM2 ganglioside activator##X16087|GM2A|2760|GM2 ganglioside activator	0.999222	CTCF.p2:2:0.999
chr12	111038184	111038340	reg1004602.p1	13.965	+	AK124744 TSC_hg19_v1_chr12_-_111021124	-17136	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	-17192	-	TSC_hg19_v1_chr12_-_111020755 AY357944	-17469	-	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	13663	+	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	88696	-	AK293543 NM_001040107	89337	-	AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AY357944|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1	0.466888	CTCF.p2:27:0.467
chr17	42852314	42852386	reg1001868.p1	13.965	+	BC144550 AB462930 AB009675 NM_002390 TSC_hg19_v1_chr17_+_42836567 AK296512	-15731	+	CU677579 AK295296 BC026999 TSC_hg19_v1_chr17_+_42786269	-66113	+	TSC_hg19_v1_chr17_+_42786060 BC033660	-66288	+	NM_005497 TSC_hg19_v1_chr17_-_42907633	55290	-	NM_001080383	55828	-	BC020667 NM_016438	72928	+	BC144550|ADAM11|4185|ADAM metallopeptidase domain 11##AB009675|ADAM11|4185|ADAM metallopeptidase domain 11##NM_002390|ADAM11|4185|ADAM metallopeptidase domain 11##AK296512|ADAM11|4185|ADAM metallopeptidase domain 11##AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##NM_005497|GJC1|10052|gap junction protein, gamma 1, 45kDa##NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa##BC020667|HIGD1B|51751|HIG1 hypoxia inducible domain family, member 1B##NM_016438|HIGD1B|51751|HIG1 hypoxia inducible domain family, member 1B	0.0	
chr3	10266693	10266838	reg1004680.p1	13.964	+	NM_001570 BC125184 AK299033 AK312841 TSC_hg19_v1_chr3_+_10206602 AF026273 AB587544 AJ496794	-60165	+	TSC_hg19_v1_chr3_+_10183517 AB528056	-83227	+	AK304002 TSC_hg19_v1_chr3_+_10183487	-83267	+	TSC_hg19_v1_chr3_+_10290182 NM_014760	23410	+	TSC_hg19_v1_chr3_+_10290210 D86972	23497	+	TSC_hg19_v1_chr3_+_10290370 AK289794 BC090935 BC101776 BC101770	23757	+	NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2##BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK304002|VHL|7428|von Hippel-Lindau tumor suppressor##NM_014760|TATDN2|9797|TatD DNase domain containing 2##D86972|TATDN2|9797|TatD DNase domain containing 2##AK289794|TATDN2|9797|TatD DNase domain containing 2##BC090935|TATDN2|9797|TatD DNase domain containing 2##BC101776|TATDN2|9797|TatD DNase domain containing 2##BC101770|TATDN2|9797|TatD DNase domain containing 2	0.779123	CTCF.p2:22:0.618
chr6	157735874	157735994	reg1003216.p1	13.964	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-636059	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-636650	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-636709	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	8650	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	9283	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	66605	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	1.466307	CTCF.p2:27:0.849	CTCF.p2:-38:0.618
chr11	116147416	116147536	reg1002648.p2	13.963	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-772296	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-1058828	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1598228	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	496222	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	511239	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	511262	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.996716	CTCF.p2:12:0.997
chr7	75807575	75807696	reg1003583.p1	13.963	+	BC001917 TSC_hg19_v1_chr7_+_75677453 AK316587 DQ893080 DQ896341 AK293460 CR536548	-130170	+	AK095803 AK290779 TSC_hg19_v1_chr7_+_75677402	-130233	+	TSC_hg19_v1_chr7_+_75677368 AF047470 NM_005918	-130257	+	TSC_hg19_v1_chr7_+_75831199 NM_001110199 BC029292	23570	+	TSC_hg19_v1_chr7_+_75931989 NM_001540 U90906 BC000510 BC012292 AF086135 X54079 AK296890	124274	+	AK311894 TSC_hg19_v1_chr7_+_75931991 BC012768 BC073768 AB020027 AL050380 DQ891304 DQ893349 DQ894489 DQ896669 AB528488 BT019888 CR407614 CR536489 BC014920	124395	+	BC001917|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK316587|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ893080|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ896341|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK293460|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##CR536548|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK095803|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK290779|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AF047470|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##NM_005918|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##NM_001110199|SRRM3|222183|serine/arginine repetitive matrix 3##BC029292|SRRM3|222183|serine/arginine repetitive matrix 3##NM_001540|HSPB1|3315|heat shock 27kDa protein 1##U90906|HSPB1|3315|heat shock 27kDa protein 1##BC000510|HSPB1|3315|heat shock 27kDa protein 1##BC012292|HSPB1|3315|heat shock 27kDa protein 1##X54079|HSPB1|3315|heat shock 27kDa protein 1##AK296890|HSPB1|3315|heat shock 27kDa protein 1##AK311894|HSPB1|3315|heat shock 27kDa protein 1##BC012768|HSPB1|3315|heat shock 27kDa protein 1##BC073768|HSPB1|3315|heat shock 27kDa protein 1##AB020027|HSPB1|3315|heat shock 27kDa protein 1##AL050380|HSPB1|3315|heat shock 27kDa protein 1##DQ891304|HSPB1|3315|heat shock 27kDa protein 1##DQ893349|HSPB1|3315|heat shock 27kDa protein 1##DQ894489|HSPB1|3315|heat shock 27kDa protein 1##DQ896669|HSPB1|3315|heat shock 27kDa protein 1##BT019888|HSPB1|3315|heat shock 27kDa protein 1##CR407614|HSPB1|3315|heat shock 27kDa protein 1##CR536489|HSPB1|3315|heat shock 27kDa protein 1##BC014920|HSPB1|3315|heat shock 27kDa protein 1	0.968061	CTCF.p2:-18:0.968
chr2	105986367	105986509	reg1004249.p1	13.962	+	TSC_hg19_v1_chr2_+_105954010 AK127661 BC001310 NM_024093 DQ891212 DQ894395	-32414	+	AK304268 TSC_hg19_v1_chr2_+_105953980 AK307891	-32528	+	TSC_hg19_v1_chr2_-_105946156 BC020548 BC010093 NM_001142621 NM_004257	-40286	-	TSC_hg19_v1_chr2_-_106015453 BC093049 CR936799 BC036085 BC021049 AK313841 L42176 NM_001039492 BC012742 BC014397 DQ266432 NM_001450 NM_201555	29113	-	NM_201557	68791	-	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	375105	+	AK127661|C2orf49|79074|chromosome 2 open reading frame 49##BC001310|C2orf49|79074|chromosome 2 open reading frame 49##NM_024093|C2orf49|79074|chromosome 2 open reading frame 49##DQ891212|C2orf49|79074|chromosome 2 open reading frame 49##DQ894395|C2orf49|79074|chromosome 2 open reading frame 49##AK304268|C2orf49|79074|chromosome 2 open reading frame 49##AK307891|C2orf49|79074|chromosome 2 open reading frame 49##BC020548|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_001142621|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_004257|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##BC093049|FHL2|2274|four and a half LIM domains 2##CR936799|FHL2|2274|four and a half LIM domains 2##BC036085|FHL2|2274|four and a half LIM domains 2##AK313841|FHL2|2274|four and a half LIM domains 2##L42176|FHL2|2274|four and a half LIM domains 2##NM_001039492|FHL2|2274|four and a half LIM domains 2##BC012742|FHL2|2274|four and a half LIM domains 2##BC014397|FHL2|2274|four and a half LIM domains 2##DQ266432|FHL2|2274|four and a half LIM domains 2##NM_001450|FHL2|2274|four and a half LIM domains 2##NM_201555|FHL2|2274|four and a half LIM domains 2##NM_201557|FHL2|2274|four and a half LIM domains 2##NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2	0.917732	CTCF.p2:-5:0.918
chr16	56611073	56611206	reg1003531.p1	13.961	+	BC113442 BC113444 NM_032935	-12179	+	TSC_hg19_v1_chr16_-_56553962 AB208905 NM_031885	-57154	-	AB527821 DQ892680 DQ895923 TSC_hg19_v1_chr16_-_56553937 AK289604 BC014140 AK309068 AK027635	-57275	-	NM_005954	12127	+	NM_005953 TSC_hg19_v1_chr16_+_56642498 BC007034 BC062435 D28442 BC070289 V00594 AY077636 M26637 AB463881 BT007315 S52379 X97260	31383	+	NM_175617 TSC_hg19_v1_chr16_+_56659593	48449	+	BC113442|MT4|84560|metallothionein 4##BC113444|MT4|84560|metallothionein 4##NM_032935|MT4|84560|metallothionein 4##AB208905|BBS2|583|Bardet-Biedl syndrome 2##NM_031885|BBS2|583|Bardet-Biedl syndrome 2##DQ892680|BBS2|583|Bardet-Biedl syndrome 2##DQ895923|BBS2|583|Bardet-Biedl syndrome 2##AK289604|BBS2|583|Bardet-Biedl syndrome 2##BC014140|BBS2|583|Bardet-Biedl syndrome 2##AK309068|BBS2|583|Bardet-Biedl syndrome 2##AK027635|BBS2|583|Bardet-Biedl syndrome 2##NM_005954|MT3|4504|metallothionein 3##NM_005953|MT2A|4502|metallothionein 2A##BC007034|MT2A|4502|metallothionein 2A##D28442|MT2A|4502|metallothionein 2A##BC070289|MT2A|4502|metallothionein 2A##V00594|MT2A|4502|metallothionein 2A##M26637|MT2A|4502|metallothionein 2A##BT007315|MT2A|4502|metallothionein 2A##S52379|MT2A|4502|metallothionein 2A##X97260|MT2A|4502|metallothionein 2A##NM_175617|MT1E|4493|metallothionein 1E	0.756905	CTCF.p2:-11:0.592
chr7	37392601	37392736	reg1004614.p1	13.961	+	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	-366948	-	BC064635 NM_001039459	-367978	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-628592	-	AK291784 NM_001206482	603	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	95800	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	95887	-	D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1	0.726743	CTCF.p2:0:0.696
chr12	10484403	10484516	reg1002818.p1	13.960	+	NM_002262 NM_007334 AF498040 AF498041 AY327501 U30610 BC028009 AB009597 AJ000001	-23927	+	AK291506 AY227806 NM_001114396	-27413	+	AF287012 TSC_hg19_v1_chr12_+_10365506 AF087847 AK303581 AK315418 AK074195 BC028315 NM_031412 BC009309 AL136676 BX648781 BC008891	-118983	+	BC039836 AK226161 AK292059 NM_007360	58175	-	TSC_hg19_v1_chr12_-_10562143 AK292020 AK310717 AB590270 AF350018 AF350019 CU676066 DQ891978 DQ895169 BC017784 U96845 AJ001683 NM_013431	77789	-	AF461811 NM_001199805	78285	-	NM_002262|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_007334|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AF498040|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AF498041|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AY327501|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##U30610|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##BC028009|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AB009597|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AJ000001|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AK291506|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AY227806|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_001114396|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AF287012|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AF087847|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK303581|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK315418|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK074195|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC028315|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##NM_031412|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC009309|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AL136676|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BX648781|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC008891|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC039836|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AK226161|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AK292059|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##NM_007360|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AK292020|KLRC4-KLRK1|100528032|KLRC4-KLRK1 readthrough##AK310717|KLRC4-KLRK1|100528032|KLRC4-KLRK1 readthrough##AF350018|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##AF350019|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##DQ891978|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##DQ895169|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##BC017784|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##U96845|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##AJ001683|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##NM_013431|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##AF461811|KLRC4-KLRK1|100528032|KLRC4-KLRK1 readthrough##NM_001199805|KLRC4-KLRK1|100528032|KLRC4-KLRK1 readthrough	0.623314	CTCF.p2:-8:0.623
chr3	133103423	133103559	reg1003465.p1	13.960	+	TSC_hg19_v1_chr3_+_132757234 AY358381 BC000568	-346257	+	NM_001136469 NM_023943 TSC_hg19_v1_chr3_+_132757202	-346304	+	AB082531 NM_153240 TSC_hg19_v1_chr3_-_132441315	-662183	-	NM_003571 BC113518 BC113520 HQ258421 U48224	15367	+	TSC_hg19_v1_chr3_+_133292443 NM_001134422 NM_017548	188985	+	TSC_hg19_v1_chr3_+_133292588 AF103803	189081	+	AY358381|TMEM108|66000|transmembrane protein 108##BC000568|TMEM108|66000|transmembrane protein 108##NM_001136469|TMEM108|66000|transmembrane protein 108##NM_023943|TMEM108|66000|transmembrane protein 108##AB082531|NPHP3-ACAD11|100532724|NPHP3-ACAD11 readthrough##NM_153240|NPHP3|27031|nephronophthisis 3 (adolescent)##NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin##HQ258421|BFSP2|8419|beaded filament structural protein 2, phakinin##U48224|BFSP2|8419|beaded filament structural protein 2, phakinin##NM_001134422|CDV3|55573|CDV3 homolog (mouse)##NM_017548|CDV3|55573|CDV3 homolog (mouse)##AF103803|CDV3|55573|CDV3 homolog (mouse)	0.508194	CTCF.p2:4:0.508
chr9	95922345	95922474	reg1004672.p1	13.960	+	BT007164 CU690562 U72661 U91512 BC019336 BC004440 BC000298 TSC_hg19_v1_chr9_-_95896534 BC048212 NM_004148	-25867	-	BC091476 TSC_hg19_v1_chr9_+_95858566	-63830	+	NM_032310 TSC_hg19_v1_chr9_+_95858498 AK057716 AK091611 AX747094 BC042201 BC038856 BC004500	-63929	+	AJ242724 NM_006648 AB051547 AB463351	24823	+	NM_001098808 TSC_hg19_v1_chr9_-_96108726	186301	-	BC080634 TSC_hg19_v1_chr9_-_96213799 BC037551 BC063650 BC038803	291379	-	BT007164|NINJ1|4814|ninjurin 1##U72661|NINJ1|4814|ninjurin 1##U91512|NINJ1|4814|ninjurin 1##BC019336|NINJ1|4814|ninjurin 1##BC004440|NINJ1|4814|ninjurin 1##BC000298|NINJ1|4814|ninjurin 1##BC048212|NINJ1|4814|ninjurin 1##NM_004148|NINJ1|4814|ninjurin 1##BC091476|C9orf89|84270|chromosome 9 open reading frame 89##NM_032310|C9orf89|84270|chromosome 9 open reading frame 89##AK057716|C9orf89|84270|chromosome 9 open reading frame 89##AK091611|C9orf89|84270|chromosome 9 open reading frame 89##BC042201|C9orf89|84270|chromosome 9 open reading frame 89##BC038856|C9orf89|84270|chromosome 9 open reading frame 89##BC004500|C9orf89|84270|chromosome 9 open reading frame 89##AJ242724|WNK2|65268|WNK lysine deficient protein kinase 2##NM_006648|WNK2|65268|WNK lysine deficient protein kinase 2##AB051547|WNK2|65268|WNK lysine deficient protein kinase 2##NM_001098808|C9orf129|445577|chromosome 9 open reading frame 129##BC080634|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC037551|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC063650|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC038803|FAM120AOS|158293|family with sequence similarity 120A opposite strand	0.783328	CTCF.p2:-1:0.767
chr7	34470099	34470200	reg1002832.p2	13.959	+	AK289963 NM_133468 AK096150 BC060868	-525007	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-1301068	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-1321172	-	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	227770	+	DQ287932 NM_015283	607503	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	755643	-	AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)	0.772013	CTCF.p2:0:0.772
chr16	67462154	67462289	reg1005191.p1	13.958	+	TSC_hg19_v1_chr16_-_67450360 NM_013304 U90653 BC021908	-11924	-	TSC_hg19_v1_chr16_-_67427402 AF132972 AF078846 BC000691 NM_015964 NM_016140	-34842	-	AK311487 NM_001161575 AK297329 AK309897 AK001866 AK292311 AY313780 AK301766	-80943	+	TSC_hg19_v1_chr16_+_67465023 U26726 BC036780 BC064536 NM_000196 U14631	2809	+	CU679153 DQ893270 DQ896601 X71490 TSC_hg19_v1_chr16_-_67515051 AK300570 AK313035 AK125522 BC008861 NM_004691	52823	-	NM_001138 U88063	55494	-	NM_013304|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U90653|ZDHHC1|29800|zinc finger, DHHC-type containing 1##BC021908|ZDHHC1|29800|zinc finger, DHHC-type containing 1##AF132972|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AF078846|TPPP3|51673|tubulin polymerization-promoting protein family member 3##BC000691|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_015964|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_016140|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AK311487|LRRC36|55282|leucine rich repeat containing 36##NM_001161575|LRRC36|55282|leucine rich repeat containing 36##AK297329|LRRC36|55282|leucine rich repeat containing 36##AK309897|LRRC36|55282|leucine rich repeat containing 36##AK001866|LRRC36|55282|leucine rich repeat containing 36##AK292311|LRRC36|55282|leucine rich repeat containing 36##AY313780|LRRC36|55282|leucine rich repeat containing 36##AK301766|LRRC36|55282|leucine rich repeat containing 36##U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##DQ893270|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##DQ896601|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##X71490|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK300570|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK313035|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK125522|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##BC008861|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_004691|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_001138|AGRP|181|agouti related protein homolog (mouse)##U88063|AGRP|181|agouti related protein homolog (mouse)	1.844734	CTCF.p2:-10:0.999	CTCF.p2:-107:0.846
chr20	35515714	35515832	reg1002505.p2	13.958	+	TSC_hg19_v1_chr20_+_35504544 BC127688 BC130646 BC130648 AK123544 NM_080628 HQ258755	-11224	+	TSC_hg19_v1_chr20_-_35492072 NM_080627	-23639	-	AK126630 NM_199181	-27498	-	AB013847 CU690348 TSC_hg19_v1_chr20_-_35580085 BC036450 AK304187 AB208944	64299	-	TSC_hg19_v1_chr20_-_35580112 AK304795 AL050267	64340	-	AF228421 AK315169 TSC_hg19_v1_chr20_-_35580179	64404	-	BC127688|C20orf118|140711|chromosome 20 open reading frame 118##BC130646|C20orf118|140711|chromosome 20 open reading frame 118##BC130648|C20orf118|140711|chromosome 20 open reading frame 118##AK123544|C20orf118|140711|chromosome 20 open reading frame 118##NM_080628|C20orf118|140711|chromosome 20 open reading frame 118##HQ258755|C20orf118|140711|chromosome 20 open reading frame 118##NM_080627|KIAA0889|140710|KIAA0889##AK126630|KIAA0889|140710|KIAA0889##NM_199181|KIAA0889|140710|KIAA0889##AB013847|SAMHD1|25939|SAM domain and HD domain 1##BC036450|SAMHD1|25939|SAM domain and HD domain 1##AK304187|SAMHD1|25939|SAM domain and HD domain 1##AB208944|SAMHD1|25939|SAM domain and HD domain 1##AK304795|SAMHD1|25939|SAM domain and HD domain 1##AL050267|SAMHD1|25939|SAM domain and HD domain 1##AF228421|SAMHD1|25939|SAM domain and HD domain 1##AK315169|SAMHD1|25939|SAM domain and HD domain 1	0.802844	CTCF.p2:9:0.803
chr2	25745070	25745220	reg1004172.p1	13.958	+	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	-179683	-	TSC_hg19_v1_chr2_-_25565353 AB208833	-179782	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	-179817	-	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	151256	-	AB385496 TSC_hg19_v1_chr2_-_26101159	355984	-	TSC_hg19_v1_chr2_-_26101174 AB084279	356028	-	BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)	0.666506	CTCF.p2:21:0.667
chr17	75092702	75092817	reg1004402.p1	13.957	+	NM_001204410 FM995496 AF130050	-7491	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	-7962	+	AB114297 NM_198955 BC144361	-223999	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	44275	+	TSC_hg19_v1_chr17_+_75137104 AK290913 BC142979 BC136523 BC136525	44376	+	AK293206 NM_001144001	88535	+	NM_001204410|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995496|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AF130050|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338##AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AK290913|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC142979|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136523|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136525|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AK293206|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001144001|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)	0.0	
chr19	40811367	40811508	reg1004579.p1	13.957	+	BC063421 TSC_hg19_v1_chr19_-_40791292 NM_001243027 NM_001243028 NM_001626	-20114	-	TSC_hg19_v1_chr19_-_40791273 BC022779 BC040028	-20160	-	AK294453 AK308906 TSC_hg19_v1_chr19_-_40791253	-20181	-	BC027935 TSC_hg19_v1_chr19_-_40854291 AL834131 NM_178830	42850	-	NM_001031696 NM_012268	42894	+	TSC_hg19_v1_chr19_-_40854423 EU831761 EU831839 AK094207 CR936760	42995	-	BC063421|AKT2|208|v-akt murine thymoma viral oncogene homolog 2##NM_001243027|AKT2|208|v-akt murine thymoma viral oncogene homolog 2##NM_001243028|AKT2|208|v-akt murine thymoma viral oncogene homolog 2##NM_001626|AKT2|208|v-akt murine thymoma viral oncogene homolog 2##BC022779|AKT2|208|v-akt murine thymoma viral oncogene homolog 2##BC040028|AKT2|208|v-akt murine thymoma viral oncogene homolog 2##AK294453|AKT2|208|v-akt murine thymoma viral oncogene homolog 2##AK308906|AKT2|208|v-akt murine thymoma viral oncogene homolog 2##BC027935|C19orf47|126526|chromosome 19 open reading frame 47##AL834131|C19orf47|126526|chromosome 19 open reading frame 47##NM_178830|C19orf47|126526|chromosome 19 open reading frame 47##NM_001031696|PLD3|23646|phospholipase D family, member 3##NM_012268|PLD3|23646|phospholipase D family, member 3##EU831761|C19orf47|126526|chromosome 19 open reading frame 47##EU831839|C19orf47|126526|chromosome 19 open reading frame 47##AK094207|C19orf47|126526|chromosome 19 open reading frame 47##CR936760|C19orf47|126526|chromosome 19 open reading frame 47	0.999459	CTCF.p2:-23:0.999
chr10	102503453	102503584	reg1004789.p1	13.956	+	TSC_hg19_v1_chr10_+_102295705 AF395830 BC007719 AB528628 DQ892767 DQ896013	-207760	+	TSC_hg19_v1_chr10_+_102295696 AK295353 NM_017902 AK000622	-207883	+	AF077028 AK293081 AK304277 TSC_hg19_v1_chr10_-_102289637 AF115968 AL080056 NM_005004 AK295867	-213882	-	TSC_hg19_v1_chr10_+_102505338 L25597 M89470 NM_000278 NM_003987 NM_003988 NM_003989 NM_003990	1884	+	AF460991 AF460992 NM_001136123 NM_001243770 NM_018121	168807	+	TSC_hg19_v1_chr10_+_102672719 AK292565 AL832343 AL833126 BC015131 BC047715 BC030565 BC064526 BC020915 BC073832 AL832383 AB385255	169257	+	AF395830|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##BC007719|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ892767|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ896013|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK295353|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##NM_017902|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK000622|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AF077028|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF115968|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AL080056|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##NM_005004|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##L25597|PAX2|5076|paired box 2##M89470|PAX2|5076|paired box 2##NM_000278|PAX2|5076|paired box 2##NM_003987|PAX2|5076|paired box 2##NM_003988|PAX2|5076|paired box 2##NM_003989|PAX2|5076|paired box 2##NM_003990|PAX2|5076|paired box 2##AF460991|FAM178A|55719|family with sequence similarity 178, member A##AF460992|FAM178A|55719|family with sequence similarity 178, member A##NM_001136123|FAM178A|55719|family with sequence similarity 178, member A##NM_001243770|FAM178A|55719|family with sequence similarity 178, member A##NM_018121|FAM178A|55719|family with sequence similarity 178, member A##AK292565|FAM178A|55719|family with sequence similarity 178, member A##AL832343|FAM178A|55719|family with sequence similarity 178, member A##AL833126|FAM178A|55719|family with sequence similarity 178, member A##BC015131|FAM178A|55719|family with sequence similarity 178, member A##BC047715|FAM178A|55719|family with sequence similarity 178, member A##BC030565|FAM178A|55719|family with sequence similarity 178, member A##BC064526|FAM178A|55719|family with sequence similarity 178, member A##BC020915|FAM178A|55719|family with sequence similarity 178, member A##BC073832|FAM178A|55719|family with sequence similarity 178, member A##AL832383|FAM178A|55719|family with sequence similarity 178, member A	0.98979	CTCF.p2:9:0.990
chr12	48231492	48231619	reg1003282.p1	13.955	+	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	-17891	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-64521	+	AK092448 NM_001098531	-78681	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	67246	-	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	125783	+	TSC_hg19_v1_chr12_+_48357387 AK310035 AK313698 AK299154 BC107792	125865	+	AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C##AK310035|TMEM106C|79022|transmembrane protein 106C##AK313698|TMEM106C|79022|transmembrane protein 106C##AK299154|TMEM106C|79022|transmembrane protein 106C##BC107792|TMEM106C|79022|transmembrane protein 106C	0.995088	CTCF.p2:10:0.995
chr16	84220663	84220808	reg1004034.p1	13.954	+	TSC_hg19_v1_chr16_-_84220644 AK304739 L39059 AB209594 AK299060 AK097031 AK299347 BC028131 AK304261 AK315982 NM_001243156 NM_001243157 NM_001243158 NM_001243159 NM_001243160 NM_005679 NM_139353	-111	-	NM_178452 TSC_hg19_v1_chr16_+_84178912 BX648657 AL833327 AL833328 AL833336 AK057238 AK310961 BC024009	-41843	+	TSC_hg19_v1_chr16_-_84178781 AK074878 AK299798 BC018084 NM_001146051 NM_031463	-41975	-	NM_001145400 NM_139174 AK093046 AX747882 AF447586 BC033491 AK315171 CU689630	4043	+	BC109203 BC008969 NM_172347	52594	-	AF302109 NM_021197 AF169631 TSC_hg19_v1_chr16_+_84328440 AK075061 BC029159 DQ893365 DQ896682	107753	+	AK304739|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##L39059|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AB209594|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK299060|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK097031|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK299347|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##BC028131|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK304261|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK315982|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243156|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243157|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243158|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243159|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243160|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_005679|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_139353|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_178452|DNAAF1|123872|dynein, axonemal, assembly factor 1##BX648657|DNAAF1|123872|dynein, axonemal, assembly factor 1##AL833327|DNAAF1|123872|dynein, axonemal, assembly factor 1##AL833328|DNAAF1|123872|dynein, axonemal, assembly factor 1##AL833336|DNAAF1|123872|dynein, axonemal, assembly factor 1##AK057238|DNAAF1|123872|dynein, axonemal, assembly factor 1##AK310961|DNAAF1|123872|dynein, axonemal, assembly factor 1##BC024009|DNAAF1|123872|dynein, axonemal, assembly factor 1##AK074878|HSDL1|83693|hydroxysteroid dehydrogenase like 1##AK299798|HSDL1|83693|hydroxysteroid dehydrogenase like 1##BC018084|HSDL1|83693|hydroxysteroid dehydrogenase like 1##NM_001146051|HSDL1|83693|hydroxysteroid dehydrogenase like 1##NM_031463|HSDL1|83693|hydroxysteroid dehydrogenase like 1##NM_001145400|ADAD2|161931|adenosine deaminase domain containing 2##NM_139174|ADAD2|161931|adenosine deaminase domain containing 2##AK093046|ADAD2|161931|adenosine deaminase domain containing 2##AF447586|ADAD2|161931|adenosine deaminase domain containing 2##BC033491|ADAD2|161931|adenosine deaminase domain containing 2##AK315171|ADAD2|161931|adenosine deaminase domain containing 2##BC109203|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##BC008969|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##NM_172347|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##AF302109|WFDC1|58189|WAP four-disulfide core domain 1##NM_021197|WFDC1|58189|WAP four-disulfide core domain 1##AF169631|WFDC1|58189|WAP four-disulfide core domain 1##AK075061|WFDC1|58189|WAP four-disulfide core domain 1##BC029159|WFDC1|58189|WAP four-disulfide core domain 1##DQ893365|WFDC1|58189|WAP four-disulfide core domain 1##DQ896682|WFDC1|58189|WAP four-disulfide core domain 1	0.121238	
chr17	26132594	26132732	reg1002943.p1	13.952	+	BC130283 BC144126 U05810 L09210 X73029 AF068236 AK304252 NM_000625 TSC_hg19_v1_chr17_-_26127556	-5148	-	U31511 TSC_hg19_v1_chr17_-_26127402	-5265	-	TSC_hg19_v1_chr17_+_25958264 AB003517 AB008492	-174391	+	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	87728	-	TSC_hg19_v1_chr17_+_26369661 AK315315 AF197898 NM_016231 AF180819	236990	+	AB384832 AK024686 TSC_hg19_v1_chr17_+_26370066	237338	+	BC130283|NOS2|4843|nitric oxide synthase 2, inducible##BC144126|NOS2|4843|nitric oxide synthase 2, inducible##U05810|NOS2|4843|nitric oxide synthase 2, inducible##L09210|NOS2|4843|nitric oxide synthase 2, inducible##X73029|NOS2|4843|nitric oxide synthase 2, inducible##AF068236|NOS2|4843|nitric oxide synthase 2, inducible##AK304252|NOS2|4843|nitric oxide synthase 2, inducible##NM_000625|NOS2|4843|nitric oxide synthase 2, inducible##U31511|NOS2|4843|nitric oxide synthase 2, inducible##AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108##AK315315|NLK|51701|nemo-like kinase##AF197898|NLK|51701|nemo-like kinase##NM_016231|NLK|51701|nemo-like kinase##AF180819|NLK|51701|nemo-like kinase##AK024686|NLK|51701|nemo-like kinase	0.520048	CTCF.p2:-15:0.520
chr20	4936971	4937097	reg1004568.p1	13.951	+	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	-132840	-	AY154472 NM_170774	-141266	-	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	-234500	+	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	45126	-	BC013112 AF164142 NM_203327	53891	-	TSC_hg19_v1_chr20_-_5093685 AY359115 BC015113 AK055700 BC110408 BC011990 BC009768 BC009770 AF161392 BC009769 AK315606 BC066317 AK309823 BC070212 NM_001009923 NM_001009924 NM_001009925 NM_014145	156581	-	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##BC013112|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AF164142|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_203327|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AY359115|C20orf30|29058|chromosome 20 open reading frame 30##BC015113|C20orf30|29058|chromosome 20 open reading frame 30##AK055700|C20orf30|29058|chromosome 20 open reading frame 30##BC110408|C20orf30|29058|chromosome 20 open reading frame 30##BC011990|C20orf30|29058|chromosome 20 open reading frame 30##BC009768|C20orf30|29058|chromosome 20 open reading frame 30##BC009770|C20orf30|29058|chromosome 20 open reading frame 30##AF161392|C20orf30|29058|chromosome 20 open reading frame 30##BC009769|C20orf30|29058|chromosome 20 open reading frame 30##AK315606|C20orf30|29058|chromosome 20 open reading frame 30##BC066317|C20orf30|29058|chromosome 20 open reading frame 30##AK309823|C20orf30|29058|chromosome 20 open reading frame 30##BC070212|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009923|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009924|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009925|C20orf30|29058|chromosome 20 open reading frame 30##NM_014145|C20orf30|29058|chromosome 20 open reading frame 30	0.574062	CTCF.p2:13:0.574
chrX	70318304	70318436	reg1003612.p1	13.951	+	TSC_hg19_v1_chrX_+_70316026 NM_001170931 NM_005938 AK300142 X93996 BC106761 AB463650 AF384029	-2363	+	BT007203 TSC_hg19_v1_chrX_-_70288224 BC080535 AF171229 BC103847 BC103848 BC020559 NM_013346 AK312977	-30170	-	AF320612 BC033816 AX721169 BC021242 AK074865 AK075014 NM_001048164 NM_032803	-167421	-	NM_001025265	8267	-	AB102794 AB102797 AB102793 AB102795 CU677147 DQ895451 EU176337 TSC_hg19_v1_chrX_-_70331422 AB463801 BC014972 BC071710 D11086 AK314932 AK298656 NM_000206	13018	-	TSC_hg19_v1_chrX_+_70338445 AK302543 NM_005120 AF071309	20134	+	NM_001170931|FOXO4|4303|forkhead box O4##NM_005938|FOXO4|4303|forkhead box O4##X93996|FOXO4|4303|forkhead box O4##BC106761|FOXO4|4303|forkhead box O4##AF384029|FOXO4|4303|forkhead box O4##BT007203|SNX12|29934|sorting nexin 12##BC080535|SNX12|29934|sorting nexin 12##AF171229|SNX12|29934|sorting nexin 12##BC103847|SNX12|29934|sorting nexin 12##BC103848|SNX12|29934|sorting nexin 12##BC020559|SNX12|29934|sorting nexin 12##NM_013346|SNX12|29934|sorting nexin 12##AK312977|SNX12|29934|sorting nexin 12##AF320612|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##BC033816|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK074865|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK075014|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_001048164|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_032803|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_001025265|CXorf65|158830|chromosome X open reading frame 65##AB102794|IL2RG|3561|interleukin 2 receptor, gamma##AB102797|IL2RG|3561|interleukin 2 receptor, gamma##AB102793|IL2RG|3561|interleukin 2 receptor, gamma##AB102795|IL2RG|3561|interleukin 2 receptor, gamma##DQ895451|IL2RG|3561|interleukin 2 receptor, gamma##EU176337|IL2RG|3561|interleukin 2 receptor, gamma##BC014972|IL2RG|3561|interleukin 2 receptor, gamma##BC071710|IL2RG|3561|interleukin 2 receptor, gamma##D11086|IL2RG|3561|interleukin 2 receptor, gamma##AK314932|IL2RG|3561|interleukin 2 receptor, gamma##AK298656|IL2RG|3561|interleukin 2 receptor, gamma##NM_000206|IL2RG|3561|interleukin 2 receptor, gamma##AK302543|MED12|9968|mediator complex subunit 12##NM_005120|MED12|9968|mediator complex subunit 12##AF071309|MED12|9968|mediator complex subunit 12	0.995177	CTCF.p2:-8:0.995
chr9	95871562	95871682	reg1003867.p1	13.949	+	BC091476 TSC_hg19_v1_chr9_+_95858566	-13043	+	NM_032310 TSC_hg19_v1_chr9_+_95858498 AK057716 AK091611 AX747094 BC042201 BC038856 BC004500	-13142	+	TSC_hg19_v1_chr9_+_95821007 CU677063 DQ894024 EU176188 AY358190	-50598	+	BT007164 CU690562 U72661 U91512 BC019336 BC004440 BC000298 TSC_hg19_v1_chr9_-_95896534 BC048212 NM_004148	24920	-	AJ242724 NM_006648 AB051547 AB463351	75610	+	NM_001098808 TSC_hg19_v1_chr9_-_96108726	237088	-	BC091476|C9orf89|84270|chromosome 9 open reading frame 89##NM_032310|C9orf89|84270|chromosome 9 open reading frame 89##AK057716|C9orf89|84270|chromosome 9 open reading frame 89##AK091611|C9orf89|84270|chromosome 9 open reading frame 89##BC042201|C9orf89|84270|chromosome 9 open reading frame 89##BC038856|C9orf89|84270|chromosome 9 open reading frame 89##BC004500|C9orf89|84270|chromosome 9 open reading frame 89##DQ894024|SUSD3|203328|sushi domain containing 3##EU176188|SUSD3|203328|sushi domain containing 3##AY358190|SUSD3|203328|sushi domain containing 3##BT007164|NINJ1|4814|ninjurin 1##U72661|NINJ1|4814|ninjurin 1##U91512|NINJ1|4814|ninjurin 1##BC019336|NINJ1|4814|ninjurin 1##BC004440|NINJ1|4814|ninjurin 1##BC000298|NINJ1|4814|ninjurin 1##BC048212|NINJ1|4814|ninjurin 1##NM_004148|NINJ1|4814|ninjurin 1##AJ242724|WNK2|65268|WNK lysine deficient protein kinase 2##NM_006648|WNK2|65268|WNK lysine deficient protein kinase 2##AB051547|WNK2|65268|WNK lysine deficient protein kinase 2##NM_001098808|C9orf129|445577|chromosome 9 open reading frame 129	0.999891	CTCF.p2:11:0.983
chrX	5939521	5939640	reg1003452.p1	13.949	+	TSC_hg19_v1_chrX_-_3631668 NM_005044	-2307862	-	TSC_hg19_v1_chrX_-_3631645 X85545	-2307935	-	TSC_hg19_v1_chrX_-_3631619 BC041073	-2308038	-	AB033086 AF376803 AX773938 NM_020742	206307	-	AK055471 BC034018 NM_181332	207100	-	AF167078 AF167079 NM_016379	513578	-	NM_005044|PRKX|5613|protein kinase, X-linked##X85545|PRKX|5613|protein kinase, X-linked##BC041073|PRKX|5613|protein kinase, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A	0.812046	CTCF.p2:-15:0.812
chr22	37178199	37178311	reg1002952.p2	13.948	+	AL022729 TSC_hg19_v1_chr22_-_37172162 AK307105 AK307382 BC000566 AB209424 NM_001177701 NM_006860	-6100	-	NM_001177702	-14182	-	AB528094 AF096322 CU012974 CU013262 CU686936 HQ258186 CR456414 BC112297 BC112299 BC069612 NM_006078	-79601	-	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	37264	-	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	78853	+	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	131403	+	AL022729|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307105|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307382|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC000566|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AB209424|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177701|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_006860|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177702|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AF096322|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CU012974|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CU013262|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##HQ258186|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CR456414|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC112297|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC112299|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC069612|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##NM_006078|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)	0.996568	CTCF.p2:-4:0.997
chr11	122666987	122667094	reg1003022.p1	13.947	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	-140493	+	BC130361 BC130363 AF303179 NM_001001786	-680179	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-1205942	+	BC070266 AK313578 AF001622 NM_019604	42189	+	AK097534 BC068507 NM_024806 NM_199124	86391	+	AB231738 NM_001098169	185316	-	NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63##AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox	0.490165	CTCF.p2:-4:0.490
chr12	93043843	93043990	reg1004878.p1	13.947	+	AJ845168 NM_001025232	-221993	-	AJ845165 AJ845166 NM_001025233	-226182	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-504273	-	NM_001037671 NM_001178097	52702	+	NM_001004330 AK128530	86371	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	279022	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.728446	CTCF.p2:8:0.728
chr16	835707	835839	reg1005523.p1	13.945	+	NM_001025190	-2848	-	TSC_hg19_v1_chr16_+_811049 NM_013404 U40434 D49441	-24699	+	AY743922 NM_005823 BC009272 NM_001177355 BC003512	-25008	+	TSC_hg19_v1_chr16_-_838380 NM_058192	2606	-	TSC_hg19_v1_chr16_+_838619 AK128869 NM_022092 AK293846 AK309804	2844	+	AK024476 TSC_hg19_v1_chr16_+_838639	2865	+	NM_001025190|MSLNL|401827|mesothelin-like##NM_013404|MSLN|10232|mesothelin##U40434|MSLN|10232|mesothelin##D49441|MSLN|10232|mesothelin##AY743922|MSLN|10232|mesothelin##NM_005823|MSLN|10232|mesothelin##BC009272|MSLN|10232|mesothelin##NM_001177355|MSLN|10232|mesothelin##BC003512|MSLN|10232|mesothelin##NM_058192|RPUSD1|113000|RNA pseudouridylate synthase domain containing 1##AK128869|CHTF18|63922|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)##NM_022092|CHTF18|63922|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)##AK293846|CHTF18|63922|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)##AK309804|CHTF18|63922|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)##AK024476|CHTF18|63922|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)	0.996414	CTCF.p2:10:0.996
chr12	110793004	110793138	reg1005676.p1	13.944	+	TSC_hg19_v1_chr12_+_110719528 M23114 BC035588 M23115 CU690124	-73703	+	TSC_hg19_v1_chr12_+_110719041 NM_001681 NM_170665	-74036	+	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	-230850	+	TSC_hg19_v1_chr12_-_110841470 BC098264 BC098295 BC098362 BC099732 BC111798 AF191340 BC148236 BC040130	48368	-	TSC_hg19_v1_chr12_-_110841526 BC141848 AK021809 NM_001137664 NM_016238	48440	-	TSC_hg19_v1_chr12_-_110888079 AF006086	95014	-	M23114|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC035588|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23115|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_001681|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_170665|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC098264|ANAPC7|51434|anaphase promoting complex subunit 7##BC098295|ANAPC7|51434|anaphase promoting complex subunit 7##BC098362|ANAPC7|51434|anaphase promoting complex subunit 7##BC099732|ANAPC7|51434|anaphase promoting complex subunit 7##BC111798|ANAPC7|51434|anaphase promoting complex subunit 7##AF191340|ANAPC7|51434|anaphase promoting complex subunit 7##BC148236|ANAPC7|51434|anaphase promoting complex subunit 7##BC040130|ANAPC7|51434|anaphase promoting complex subunit 7##BC141848|ANAPC7|51434|anaphase promoting complex subunit 7##AK021809|ANAPC7|51434|anaphase promoting complex subunit 7##NM_001137664|ANAPC7|51434|anaphase promoting complex subunit 7##NM_016238|ANAPC7|51434|anaphase promoting complex subunit 7##AF006086|ARPC3|10094|actin related protein 2/3 complex, subunit 3, 21kDa	0.0	
chr15	85587625	85587741	reg1003137.p1	13.944	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-62357	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-62446	+	TSC_hg19_v1_chr15_+_85523735 BC060762 AK074280 NM_001243137	-63981	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	78635	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	336208	+	AF127481 NM_144767	632584	+	BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##BC060762|PDE8A|5151|phosphodiesterase 8A##AK074280|PDE8A|5151|phosphodiesterase 8A##NM_001243137|PDE8A|5151|phosphodiesterase 8A##AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13	0.992444	CTCF.p2:9:0.992
chr5	55497035	55497188	reg1004498.p1	13.944	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-206348	-	NM_001242636 NM_001242639	-347962	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-349842	+	AK123389 NM_024669	32074	-	NM_005921	613788	+	TSC_hg19_v1_chr5_+_56111375 AK307828	614253	+	BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.816069	CTCF.p2:25:0.816
chr13	113295201	113295312	reg1002864.p1	13.943	+	TSC_hg19_v1_chr13_-_113260770 AK125472	-34489	-	TSC_hg19_v1_chr13_-_113242484 AK314785	-52765	-	TSC_hg19_v1_chr13_-_113242468 BC046634 NM_006322	-52783	-	AK129953 NM_207440	6101	+	TSC_hg19_v1_chr13_-_113344130 AK057085	48850	-	TSC_hg19_v1_chr13_+_113344493 NM_015205 NM_032189	49323	+	AK314785|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC046634|TUBGCP3|10426|tubulin, gamma complex associated protein 3##NM_006322|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK129953|C13orf35|400165|chromosome 13 open reading frame 35##NM_207440|C13orf35|400165|chromosome 13 open reading frame 35##AK057085|LOC440149|440149|uncharacterized LOC440149##NM_015205|ATP11A|23250|ATPase, class VI, type 11A##NM_032189|ATP11A|23250|ATPase, class VI, type 11A	0.954843	CTCF.p2:-4:0.624	CTCF.p2:-5:0.331
chr13	60254692	60254820	reg1003446.p1	13.943	+	TSC_hg19_v1_chr13_+_58207858 AK307545	-2046860	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	-2048809	+	NM_001040429	-2048968	+	BC041395 TSC_hg19_v1_chr13_-_60325215	70388	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	332564	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	483225	-	AK307545|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##NM_001040429|PCDH17|27253|protocadherin 17##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	0.925609	CTCF.p2:-1:0.926
chr16	21768462	21768591	reg1004733.p1	13.943	+	AK093062 AX747895 NM_170664 BC040551 AK302733	-52209	+	AK125840 NM_001161683	-72777	+	BC129993 NM_144672 BC129992	-78691	+	BC009198 BC068999 TSC_hg19_v1_chr16_-_21831777 BC070157	63234	-	AK316459 AK296301 AK303500 AK301703 AK294452 TSC_hg19_v1_chr16_-_21854901	86302	-	NM_003366 AK307535 TSC_hg19_v1_chr16_+_21964618	196102	+	AK093062|OTOA|146183|otoancorin##NM_170664|OTOA|146183|otoancorin##BC040551|OTOA|146183|otoancorin##AK302733|OTOA|146183|otoancorin##AK125840|OTOA|146183|otoancorin##NM_001161683|OTOA|146183|otoancorin##BC129993|OTOA|146183|otoancorin##NM_144672|OTOA|146183|otoancorin##BC129992|OTOA|146183|otoancorin##BC009198|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC068999|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC070157|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##AK316459|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296301|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AK303500|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK301703|LOC613037|613037|nuclear pore complex interacting protein pseudogene##AK294452|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_003366|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##AK307535|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II	0.346922	CTCF.p2:-9:0.347
chr20	56172117	56172248	reg1004693.p1	13.943	+	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	-36025	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	-71981	-	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-205725	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	23356	-	TSC_hg19_v1_chr20_-_56285017 AF305616 AX775889 NM_020182	112807	-	TSC_hg19_v1_chr20_+_56285236 AK056098	113043	+	NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1##AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	1.197044	CTCF.p2:5:1.000
chr9	101762860	101762982	reg1002105.p1	13.943	+	TSC_hg19_v1_chr9_+_101706027 AK308438 NM_001855 AK095885 L25286 D21230	-56938	+	TSC_hg19_v1_chr9_+_101569953 AB527376 AB040673 AB078146 AJ132365 NM_024642	-192931	+	CR749467 TSC_hg19_v1_chr9_-_101558801 NM_173551	-204270	-	TSC_hg19_v1_chr9_+_101867370 AK302059	104450	+	BC071181 TSC_hg19_v1_chr9_+_101867394	104472	+	TSC_hg19_v1_chr9_+_101867401 AJ619019 L11695 NM_001130916 NM_004612	104487	+	AK308438|COL15A1|1306|collagen, type XV, alpha 1##NM_001855|COL15A1|1306|collagen, type XV, alpha 1##AK095885|COL15A1|1306|collagen, type XV, alpha 1##L25286|COL15A1|1306|collagen, type XV, alpha 1##D21230|COL15A1|1306|collagen, type XV, alpha 1##AB040673|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AB078146|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AJ132365|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##NM_024642|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##CR749467|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##NM_173551|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##AK302059|TGFBR1|7046|transforming growth factor, beta receptor 1##BC071181|TGFBR1|7046|transforming growth factor, beta receptor 1##AJ619019|TGFBR1|7046|transforming growth factor, beta receptor 1##L11695|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_001130916|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_004612|TGFBR1|7046|transforming growth factor, beta receptor 1	0.977621	CTCF.p2:5:0.978
chr12	562489	562669	reg1000665.p2	13.941	+	NM_001130146 NM_032358 AK293165 TSC_hg19_v1_chr12_+_510809 AK027638	-51798	+	TSC_hg19_v1_chr12_-_498451 AK301150 AK301273 AB209999 BC048307 BC053893 NM_001042603 BC092417	-63977	-	AK316029 NM_001130147 NM_001130148 AK308216	-64043	+	AB089940 NM_173593	6963	+	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	189599	+	TSC_hg19_v1_chr12_-_752800 AK298043	190240	-	NM_001130146|CCDC77|84318|coiled-coil domain containing 77##NM_032358|CCDC77|84318|coiled-coil domain containing 77##AK293165|CCDC77|84318|coiled-coil domain containing 77##AK027638|CCDC77|84318|coiled-coil domain containing 77##AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A##AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A##AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A##BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A##BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A##NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A##BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A##AK316029|CCDC77|84318|coiled-coil domain containing 77##NM_001130147|CCDC77|84318|coiled-coil domain containing 77##NM_001130148|CCDC77|84318|coiled-coil domain containing 77##AK308216|CCDC77|84318|coiled-coil domain containing 77##AB089940|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_173593|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##BC033133|LOC100049716|100049716|uncharacterized LOC100049716	2.685232	CTCF.p2:23:0.895	CTCF.p2:-47:0.895	CTCF.p2:94:0.895
chr8	11759859	11759981	reg1003687.p1	13.941	+	TSC_hg19_v1_chr8_-_11725628 NM_001908 NM_147780 NM_147781 NM_147782 NM_147783	-34222	-	TSC_hg19_v1_chr8_-_11725624 AK075393	-34296	-	AK092070 AK130184 AK290239 AK297687 BC095408 TSC_hg19_v1_chr8_-_11725597 AK296845 BX647952	-34323	-	AY621333 DQ012026 NM_001033018	72187	-	AY621332 DQ012025 NM_001033017	79909	+	AY621331 DQ012024 NM_001033019 BC130461 BC130463	93869	-	NM_001908|CTSB|1508|cathepsin B##NM_147780|CTSB|1508|cathepsin B##NM_147781|CTSB|1508|cathepsin B##NM_147782|CTSB|1508|cathepsin B##NM_147783|CTSB|1508|cathepsin B##AK075393|CTSB|1508|cathepsin B##AK092070|CTSB|1508|cathepsin B##AK130184|CTSB|1508|cathepsin B##AK290239|CTSB|1508|cathepsin B##AK297687|CTSB|1508|cathepsin B##BC095408|CTSB|1508|cathepsin B##AK296845|CTSB|1508|cathepsin B##BX647952|CTSB|1508|cathepsin B##AY621333|DEFB136|613210|defensin, beta 136##DQ012026|DEFB136|613210|defensin, beta 136##NM_001033018|DEFB136|613210|defensin, beta 136##AY621332|DEFB135|613209|defensin, beta 135##DQ012025|DEFB135|613209|defensin, beta 135##NM_001033017|DEFB135|613209|defensin, beta 135##AY621331|DEFB134|613211|defensin, beta 134##DQ012024|DEFB134|613211|defensin, beta 134##NM_001033019|DEFB134|613211|defensin, beta 134##BC130461|DEFB134|613211|defensin, beta 134##BC130463|DEFB134|613211|defensin, beta 134	0.462506	CTCF.p2:16:0.463
chr8	29580617	29580770	reg1003258.p2	13.941	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-372623	-	AL137704 NM_057158	-374372	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-460079	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	359781	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	359879	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	372250	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.998512	CTCF.p2:7:0.999
chr17	36714475	36714593	reg1004441.p1	13.940	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	-129829	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	-206671	+	AY584611 NM_001004334	-214842	-	TSC_hg19_v1_chr17_-_36729122 AK295027	14588	-	BC029278 TSC_hg19_v1_chr17_-_36760969	46404	-	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	47662	-	NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1	0.665862	CTCF.p2:-9:0.666
chr5	177707082	177707217	reg1004998.p1	13.940	+	TSC_hg19_v1_chr5_-_177659803 NM_153373	-47331	-	TSC_hg19_v1_chr5_-_177659788 BC039012 BC028002 BC067745 AK292061 BC037567 BC008009 BC088800 BC037238 BC110335	-47375	-	CU691508 TSC_hg19_v1_chr5_-_177659566 AK024076	-47567	-	AY158895 AY898961 NM_173465	310406	-	BC136261 BC143538 BC143547 TSC_hg19_v1_chr5_-_178054030 CR749504 BC065732 AK310427 BC063116 AK294921 BC015942 NM_020666 AK304614 AK311485	346880	-	TSC_hg19_v1_chr5_-_178054072 AK308879 AK309215 BC151233 AK308578	346931	-	NM_153373|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC039012|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC028002|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC067745|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AK292061|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC037567|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC008009|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC088800|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC037238|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC110335|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AK024076|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AY158895|COL23A1|91522|collagen, type XXIII, alpha 1##AY898961|COL23A1|91522|collagen, type XXIII, alpha 1##NM_173465|COL23A1|91522|collagen, type XXIII, alpha 1##BC136261|CLK4|57396|CDC-like kinase 4##BC143538|CLK4|57396|CDC-like kinase 4##BC143547|CLK4|57396|CDC-like kinase 4##CR749504|CLK4|57396|CDC-like kinase 4##BC065732|CLK4|57396|CDC-like kinase 4##AK310427|CLK4|57396|CDC-like kinase 4##BC063116|CLK4|57396|CDC-like kinase 4##BC015942|CLK4|57396|CDC-like kinase 4##NM_020666|CLK4|57396|CDC-like kinase 4##AK304614|CLK4|57396|CDC-like kinase 4##AK311485|CLK4|57396|CDC-like kinase 4##AK308879|CLK4|57396|CDC-like kinase 4##BC151233|CLK4|57396|CDC-like kinase 4	0.834476	CTCF.p2:-7:0.834
chr20	335251	335367	reg1003637.p1	13.939	+	TSC_hg19_v1_chr20_+_327754 AK026982	-7560	+	TSC_hg19_v1_chr20_+_327371 NM_024958 AK290527	-7904	+	TSC_hg19_v1_chr20_+_306226 BC067361 NM_006943 U35612 BC028103	-29073	+	AY247738 NM_021158 TSC_hg19_v1_chr20_+_361483 AJ697936 AK026945 AK222837 BC027484	26104	+	TSC_hg19_v1_chr20_+_361708 BC019363	26399	+	AJ697940 TSC_hg19_v1_chr20_+_361938 AK297546 AJ697937 AJ697938 AJ697939	26653	+	AK026982|NRSN2|80023|neurensin 2##NM_024958|NRSN2|80023|neurensin 2##AK290527|NRSN2|80023|neurensin 2##BC067361|SOX12|6666|SRY (sex determining region Y)-box 12##NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12##U35612|SOX12|6666|SRY (sex determining region Y)-box 12##BC028103|SOX12|6666|SRY (sex determining region Y)-box 12##AY247738|TRIB3|57761|tribbles homolog 3 (Drosophila)##NM_021158|TRIB3|57761|tribbles homolog 3 (Drosophila)##AJ697936|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK026945|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK222837|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC027484|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC019363|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK297546|TRIB3|57761|tribbles homolog 3 (Drosophila)	0.962298	CTCF.p2:-17:0.962
chr1	117360305	117360459	reg1004986.p1	13.938	+	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	-63275	+	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	-149999	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	-246705	-	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	92260	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	184023	+	AK291017 TSC_hg19_v1_chr1_+_117602939	242542	+	AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule##AK291017|TTF2|8458|transcription termination factor, RNA polymerase II	1.889019	CTCF.p2:2:0.999	CTCF.p2:94:0.890
chr2	178029444	178029564	reg1003352.p1	13.938	+	BC013438 TSC_hg19_v1_chr2_-_177502718	-526816	-	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-895265	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-976088	+	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	47970	+	AK311688 NM_001145412 NM_001145413	99067	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	99872	-	BC013438|LOC375295|375295|uncharacterized LOC375295##NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.738117	CTCF.p2:-22:0.738
chr3	16642886	16643021	reg1004466.p1	13.938	+	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	-87729	-	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	-87935	-	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-336245	+	BX648638 AK303026 NM_001190811	3317	-	U65918 U66726 U66078 BC027595 NM_001351	4013	-	AB029015 NM_001144382	283498	+	D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2	0.999352	CTCF.p2:-6:0.999
chr8	121096929	121097065	reg1002814.p1	13.938	+	NM_022783 TSC_hg19_v1_chr8_+_120885965 AK315175 AK225168 AK297822 AL136678 AK225675 BC024746 AK022490 BC012040 AM392576 AM393333 AB527130 AK023916	-210993	+	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	-228883	-	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	-251920	-	TSC_hg19_v1_chr8_+_121137341 NM_021110 Y11709 AK293080 AK307716 AK311498	40358	+	CU692406 DQ893117 DQ893487 DQ896395 AK307322 TSC_hg19_v1_chr8_-_121457370 AB049640 AF112214 BC009190	360358	-	TSC_hg19_v1_chr8_-_121457391 AK311924	360396	-	NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_021110|COL14A1|7373|collagen, type XIV, alpha 1##Y11709|COL14A1|7373|collagen, type XIV, alpha 1##AK293080|COL14A1|7373|collagen, type XIV, alpha 1##AK307716|COL14A1|7373|collagen, type XIV, alpha 1##AK311498|COL14A1|7373|collagen, type XIV, alpha 1##DQ893117|MRPL13|28998|mitochondrial ribosomal protein L13##DQ893487|MRPL13|28998|mitochondrial ribosomal protein L13##DQ896395|MRPL13|28998|mitochondrial ribosomal protein L13##AK307322|MRPL13|28998|mitochondrial ribosomal protein L13##AB049640|MRPL13|28998|mitochondrial ribosomal protein L13##AF112214|MRPL13|28998|mitochondrial ribosomal protein L13##BC009190|MRPL13|28998|mitochondrial ribosomal protein L13##AK311924|MRPL13|28998|mitochondrial ribosomal protein L13	0.928788	CTCF.p2:23:0.929
chr15	80285842	80285976	reg1003214.p1	13.937	+	AB464467 BT007103 CR541937 CR541962 DQ891109 DQ894290 AY234180 U27467 AL110097 BC016281 AK304026 TSC_hg19_v1_chr15_-_80263526 U29680 Y09397 NM_001114735 NM_004049	-22358	-	TSC_hg19_v1_chr15_-_80216042 AF249277	-69871	-	NM_001100880 NM_001199757	-70246	-	NM_001242911 NM_001242912 NM_001242917 NM_001242918 NM_019006 TSC_hg19_v1_chr15_+_80351970 AF061739	66033	+	TSC_hg19_v1_chr15_+_80352031 BC005283 AK312646	66120	+	TSC_hg19_v1_chr15_+_80352046 AL136598	66158	+	BT007103|BCL2A1|597|BCL2-related protein A1##CR541937|BCL2A1|597|BCL2-related protein A1##CR541962|BCL2A1|597|BCL2-related protein A1##DQ891109|BCL2A1|597|BCL2-related protein A1##DQ894290|BCL2A1|597|BCL2-related protein A1##AY234180|BCL2A1|597|BCL2-related protein A1##U27467|BCL2A1|597|BCL2-related protein A1##AL110097|BCL2A1|597|BCL2-related protein A1##BC016281|BCL2A1|597|BCL2-related protein A1##U29680|BCL2A1|597|BCL2-related protein A1##Y09397|BCL2A1|597|BCL2-related protein A1##NM_001114735|BCL2A1|597|BCL2-related protein A1##NM_004049|BCL2A1|597|BCL2-related protein A1##AF249277|ST20|400410|suppressor of tumorigenicity 20##NM_001100880|ST20|400410|suppressor of tumorigenicity 20##NM_001199757|ST20|400410|suppressor of tumorigenicity 20##NM_001242911|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242912|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242917|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242918|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_019006|ZFAND6|54469|zinc finger, AN1-type domain 6##AF061739|ZFAND6|54469|zinc finger, AN1-type domain 6##BC005283|ZFAND6|54469|zinc finger, AN1-type domain 6##AK312646|ZFAND6|54469|zinc finger, AN1-type domain 6##AL136598|ZFAND6|54469|zinc finger, AN1-type domain 6	0.618047	CTCF.p2:7:0.618
chr15	91846196	91846333	reg1003556.p1	13.935	+	AB018278 TSC_hg19_v1_chr15_+_91769341 CR457086 DQ891614 EU176590	-76853	+	TSC_hg19_v1_chr15_+_91643558 AF052188	-202705	+	TSC_hg19_v1_chr15_+_91643505 NM_014848 BC030011	-202778	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	550679	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	550833	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	551303	+	AB018278|SV2B|9899|synaptic vesicle glycoprotein 2B##CR457086|SV2B|9899|synaptic vesicle glycoprotein 2B##DQ891614|SV2B|9899|synaptic vesicle glycoprotein 2B##EU176590|SV2B|9899|synaptic vesicle glycoprotein 2B##AF052188|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_014848|SV2B|9899|synaptic vesicle glycoprotein 2B##BC030011|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	0.994481	CTCF.p2:-15:0.994
chr3	25689678	25689825	reg1004894.p1	13.934	+	AB208879 TSC_hg19_v1_chr3_-_25683850	-5913	-	TSC_hg19_v1_chr3_-_25679768 M27504	-10037	-	TSC_hg19_v1_chr3_+_25470068 BC060794 AK292032 AB590663 CU687428 AB307688 HQ692864	-219607	+	TSC_hg19_v1_chr3_-_25706085 NM_001068 X68060 Z15111	16224	-	TSC_hg19_v1_chr3_-_25706395 AK296510 AK307450	16642	-	TSC_hg19_v1_chr3_-_25824906 BC000963 AK022471 DQ893509 DQ896501 AK310473	135136	-	AB208879|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##M27504|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##BC060794|RARB|5915|retinoic acid receptor, beta##AK292032|RARB|5915|retinoic acid receptor, beta##AB307688|RARB|5915|retinoic acid receptor, beta##HQ692864|RARB|5915|retinoic acid receptor, beta##NM_001068|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##X68060|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##Z15111|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##AK296510|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##AK307450|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##BC000963|NGLY1|55768|N-glycanase 1##AK022471|NGLY1|55768|N-glycanase 1##DQ893509|NGLY1|55768|N-glycanase 1##DQ896501|NGLY1|55768|N-glycanase 1##AK310473|NGLY1|55768|N-glycanase 1	0.697292	CTCF.p2:-15:0.587
chr9	127379897	127380013	reg1003201.p1	13.933	+	TSC_hg19_v1_chr9_-_127269711 BC032501 NM_004959	-110251	-	AY278562 NM_001161808	-166533	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	-202235	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	40749	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	153555	-	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	159545	+	BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144##BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A	0.999639	CTCF.p2:-3:1.000
chr1	10488206	10488350	reg1004606.p1	13.932	+	NM_002631 TSC_hg19_v1_chr1_+_10459125 AK300952 AK290404 AK296889 AK303898 AK304423 BC000368 U30255 AB463169 AK298830	-29149	+	TSC_hg19_v1_chr1_+_10270680 AK308121 NM_015074 NM_183416 AF257176 AY139835	-217507	+	AB014584 TSC_hg19_v1_chr1_+_10093218	-395065	+	AF521016 NM_198544 NM_199006 NM_199294	1880	+	TSC_hg19_v1_chr1_+_10490434 AF516753 BC029430	2215	+	TSC_hg19_v1_chr1_+_10490829 NM_001243768	2539	+	NM_002631|PGD|5226|phosphogluconate dehydrogenase##AK300952|PGD|5226|phosphogluconate dehydrogenase##AK290404|PGD|5226|phosphogluconate dehydrogenase##AK296889|PGD|5226|phosphogluconate dehydrogenase##AK303898|PGD|5226|phosphogluconate dehydrogenase##AK304423|PGD|5226|phosphogluconate dehydrogenase##BC000368|PGD|5226|phosphogluconate dehydrogenase##U30255|PGD|5226|phosphogluconate dehydrogenase##AK298830|PGD|5226|phosphogluconate dehydrogenase##AK308121|KIF1B|23095|kinesin family member 1B##NM_015074|KIF1B|23095|kinesin family member 1B##NM_183416|KIF1B|23095|kinesin family member 1B##AF257176|KIF1B|23095|kinesin family member 1B##AY139835|KIF1B|23095|kinesin family member 1B##AB014584|UBE4B|10277|ubiquitination factor E4B##AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1##AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough##BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1##NM_001243768|APITD1-CORT|100526739|APITD1-CORT readthrough	0.989907	CTCF.p2:25:0.990
chr4	89739959	89740079	reg1003376.p2	13.932	+	BC104883 TSC_hg19_v1_chr4_-_89618996 AL834329 AK054689 BC022544 NM_153757	-121044	-	AK296379 TSC_hg19_v1_chr4_+_89513611 AK289990 BC038960 D25215 NM_014606	-226398	+	TSC_hg19_v1_chr4_-_89444931 NM_001042616 NM_032906	-295067	-	AB385402 AB020721 TSC_hg19_v1_chr4_-_89744384 AK027138 BC033006 BC086875 BC058029 AK296932 NM_001015045 AK091787 AX747185	4262	-	CU687656 BC063126 BC041029 BC053569 BX647410 NM_014883	238200	-	AK091881 AX747234 TSC_hg19_v1_chr4_-_90032571	292540	-	BC104883|NAP1L5|266812|nucleosome assembly protein 1-like 5##AL834329|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK054689|NAP1L5|266812|nucleosome assembly protein 1-like 5##BC022544|NAP1L5|266812|nucleosome assembly protein 1-like 5##NM_153757|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK296379|HERC3|8916|hect domain and RLD 3##AK289990|HERC3|8916|hect domain and RLD 3##BC038960|HERC3|8916|hect domain and RLD 3##D25215|HERC3|8916|hect domain and RLD 3##NM_014606|HERC3|8916|hect domain and RLD 3##NM_001042616|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_032906|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AB020721|FAM13A|10144|family with sequence similarity 13, member A##AK027138|FAM13A|10144|family with sequence similarity 13, member A##BC033006|FAM13A|10144|family with sequence similarity 13, member A##BC086875|FAM13A|10144|family with sequence similarity 13, member A##BC058029|FAM13A|10144|family with sequence similarity 13, member A##AK296932|FAM13A|10144|family with sequence similarity 13, member A##NM_001015045|FAM13A|10144|family with sequence similarity 13, member A##AK091787|FAM13A|10144|family with sequence similarity 13, member A##BC063126|FAM13A|10144|family with sequence similarity 13, member A##BC041029|FAM13A|10144|family with sequence similarity 13, member A##BC053569|FAM13A|10144|family with sequence similarity 13, member A##BX647410|FAM13A|10144|family with sequence similarity 13, member A##NM_014883|FAM13A|10144|family with sequence similarity 13, member A##AK091881|FAM13A|10144|family with sequence similarity 13, member A	0.157307	
chr5	176817625	176817744	reg1002792.p4	13.932	+	AK096088 NM_001167579 NM_003052 TSC_hg19_v1_chr5_+_176811434 AK298299 BC053349 BC035294 BC050385 L13258	-6242	+	TSC_hg19_v1_chr5_+_176794314 AK098150	-23371	+	TSC_hg19_v1_chr5_+_176784947 AB590533	-32699	+	BC132952 BC132954 NM_001029886	9952	-	TSC_hg19_v1_chr5_-_176831183 BT007350	13541	-	BC012390 TSC_hg19_v1_chr5_-_176831506	13776	-	AK096088|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_001167579|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_003052|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK298299|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC053349|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC035294|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC050385|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##L13258|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK098150|RGS14|10636|regulator of G-protein signaling 14##BC132952|PFN3|345456|profilin 3##BC132954|PFN3|345456|profilin 3##NM_001029886|PFN3|345456|profilin 3##BT007350|F12|2161|coagulation factor XII (Hageman factor)##BC012390|F12|2161|coagulation factor XII (Hageman factor)	0.996181	CTCF.p2:-4:0.996
chr3	141998951	141999075	reg1004116.p1	13.931	+	TSC_hg19_v1_chr3_-_141944444 NM_001039547	-54559	-	DQ891607 DQ894800 TSC_hg19_v1_chr3_-_141944428 AK313792 BX648681 BC032470 AK127641 BX648359 AK310761	-54648	-	TSC_hg19_v1_chr3_-_141868338 AK314786 BC013993 U35117 NM_001178138 NM_001178139	-130689	-	TSC_hg19_v1_chr3_-_142166860 AY137776 AB527239 BC048104 BC078146 CR749518 BC039314 BX640905 NM_001042604 NM_019001 AK304312 CR627396	167808	-	TSC_hg19_v1_chr3_-_142166862 AK096177	167889	-	TSC_hg19_v1_chr3_-_142297595 U76308 Y09077 AK307402	298586	-	NM_001039547|GK5|256356|glycerol kinase 5 (putative)##DQ891607|GK5|256356|glycerol kinase 5 (putative)##DQ894800|GK5|256356|glycerol kinase 5 (putative)##AK313792|GK5|256356|glycerol kinase 5 (putative)##BX648681|GK5|256356|glycerol kinase 5 (putative)##BC032470|GK5|256356|glycerol kinase 5 (putative)##AK127641|GK5|256356|glycerol kinase 5 (putative)##BX648359|GK5|256356|glycerol kinase 5 (putative)##AK310761|GK5|256356|glycerol kinase 5 (putative)##AK314786|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC013993|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U35117|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178138|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178139|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AY137776|XRN1|54464|5'-3' exoribonuclease 1##BC048104|XRN1|54464|5'-3' exoribonuclease 1##BC078146|XRN1|54464|5'-3' exoribonuclease 1##CR749518|XRN1|54464|5'-3' exoribonuclease 1##BC039314|XRN1|54464|5'-3' exoribonuclease 1##BX640905|XRN1|54464|5'-3' exoribonuclease 1##NM_001042604|XRN1|54464|5'-3' exoribonuclease 1##NM_019001|XRN1|54464|5'-3' exoribonuclease 1##AK304312|XRN1|54464|5'-3' exoribonuclease 1##CR627396|XRN1|54464|5'-3' exoribonuclease 1##AK096177|XRN1|54464|5'-3' exoribonuclease 1##U76308|ATR|545|ataxia telangiectasia and Rad3 related##Y09077|ATR|545|ataxia telangiectasia and Rad3 related##AK307402|ATR|545|ataxia telangiectasia and Rad3 related	0.77136	CTCF.p2:17:0.771
chr3	128327315	128327441	reg1002205.p2	13.929	+	AF008192 NM_007354	-32450	-	BC051342 BC002557 NM_032638 BX647499 TSC_hg19_v1_chr3_-_128212044	-115342	-	TSC_hg19_v1_chr3_-_128207374 AK314826 NM_001145661	-120008	-	BC007995 TSC_hg19_v1_chr3_-_128369648 CR456742 AB527671 CU679817	42208	-	TSC_hg19_v1_chr3_-_128369662 AK297941 AK312369 AK296905 CR749284 BC010839 AK223595	42304	-	TSC_hg19_v1_chr3_-_128369724 NM_002950	42360	-	AF008192|C3orf27|23434|chromosome 3 open reading frame 27##NM_007354|C3orf27|23434|chromosome 3 open reading frame 27##BC051342|GATA2|2624|GATA binding protein 2##BC002557|GATA2|2624|GATA binding protein 2##NM_032638|GATA2|2624|GATA binding protein 2##BX647499|GATA2|2624|GATA binding protein 2##AK314826|GATA2|2624|GATA binding protein 2##NM_001145661|GATA2|2624|GATA binding protein 2##BC007995|RPN1|6184|ribophorin I##CR456742|RPN1|6184|ribophorin I##AK297941|RPN1|6184|ribophorin I##AK312369|RPN1|6184|ribophorin I##AK296905|RPN1|6184|ribophorin I##CR749284|RPN1|6184|ribophorin I##BC010839|RPN1|6184|ribophorin I##AK223595|RPN1|6184|ribophorin I##NM_002950|RPN1|6184|ribophorin I	0.997936	CTCF.p2:-4:0.998
chr2	73119968	73120087	reg1004412.p1	13.928	+	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	-5497	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	-66923	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	-745085	-	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	24626	+	TSC_hg19_v1_chr2_-_73298414 AK024193	178409	-	TSC_hg19_v1_chr2_-_73298842 AL833454 AK314770 AK289731 AY044437 BC101311 BC101312 BC101313 NM_144579	178862	-	NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1##AK024193|SFXN5|94097|sideroflexin 5##AL833454|SFXN5|94097|sideroflexin 5##AK314770|SFXN5|94097|sideroflexin 5##AK289731|SFXN5|94097|sideroflexin 5##AY044437|SFXN5|94097|sideroflexin 5##BC101311|SFXN5|94097|sideroflexin 5##BC101312|SFXN5|94097|sideroflexin 5##BC101313|SFXN5|94097|sideroflexin 5##NM_144579|SFXN5|94097|sideroflexin 5	0.505326	CTCF.p2:-11:0.505
chr3	170128363	170128483	reg1003713.p1	13.928	+	NM_001145097 NM_001248008 U70730 X15217 X15219	-51013	+	AK300053 TSC_hg19_v1_chr3_+_170075522 BC053554	-52867	+	TSC_hg19_v1_chr3_+_170075508 BC059386	-52917	+	NM_005602 TSC_hg19_v1_chr3_+_170136652 AK294108 AK312923 BC013577	8235	+	AK098766 NM_001185056 AK294087	10618	+	TSC_hg19_v1_chr3_-_170303774 AK122655 NM_020949	175395	-	NM_001145097|SKIL|6498|SKI-like oncogene##NM_001248008|SKIL|6498|SKI-like oncogene##U70730|SKIL|6498|SKI-like oncogene##X15217|SKIL|6498|SKI-like oncogene##X15219|SKIL|6498|SKI-like oncogene##AK300053|SKIL|6498|SKI-like oncogene##BC059386|SKIL|6498|SKI-like oncogene##NM_005602|CLDN11|5010|claudin 11##AK312923|CLDN11|5010|claudin 11##BC013577|CLDN11|5010|claudin 11##NM_001185056|CLDN11|5010|claudin 11##AK294087|CLDN11|5010|claudin 11##AK122655|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_020949|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14	0.206248	CTCF.p2:-2:0.206
chr6	82715987	82716103	reg1001624.p1	13.927	+	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	-253634	-	AY740520 FJ211061 CU674334 CU675631 TSC_hg19_v1_chr6_-_82461975	-254124	-	TSC_hg19_v1_chr6_+_80816397 AK289977 BC040139 M55575 AB529112 BT020063 X52446	-1899608	+	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	241368	-	TSC_hg19_v1_chr6_-_82957441 NM_015525 DQ005633 DQ005634	241423	-	AK291170 NM_006670	356877	+	AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##AY740520|FAM46A|55603|family with sequence similarity 46, member A##AK289977|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC040139|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##M55575|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BT020063|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##X52446|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##NM_015525|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005633|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005634|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein	0.979407	CTCF.p2:0:0.979
chr18	74421866	74421982	reg1003190.p1	13.926	+	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	-214769	-	BC108287 TSC_hg19_v1_chr18_-_74092260	-329674	-	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-1282302	-	TSC_hg19_v1_chr18_-_74534239 BC032908	112315	-	TSC_hg19_v1_chr18_+_74534512 BX648028	112586	+	AF085243 AF085244 NM_007345	114191	+	D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC108287|ZNF516|9658|zinc finger protein 516##BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##BC032908|LOC100131655|100131655|uncharacterized LOC100131655##BX648028|ZNF236|7776|zinc finger protein 236##AF085243|ZNF236|7776|zinc finger protein 236##AF085244|ZNF236|7776|zinc finger protein 236##NM_007345|ZNF236|7776|zinc finger protein 236	0.999627	CTCF.p2:7:1.000
chr19	20070127	20070247	reg1003115.p2	13.926	+	TSC_hg19_v1_chr19_+_20011754 NM_031218 BC020837 BC070372 BC107581 AK096342 BC058821 BC038096 BC136718 BC136719	-58403	+	TSC_hg19_v1_chr19_+_19976658 BC053607 BC014148 NM_021047 BC065572 AK074757 BC125063 BC125064	-93503	+	TSC_hg19_v1_chr19_-_19932557 AL136548 BC018100 BC034920 AK122848 AK095575 NM_001099269 NM_001145404	-137635	-	AK098164 NM_001077349	79851	-	AK027845 TSC_hg19_v1_chr19_-_20150315 AK096571 NM_033196	80110	-	TSC_hg19_v1_chr19_+_20188813 NM_007138 AK298173 M61870 BC137211	118650	+	NM_031218|ZNF93|81931|zinc finger protein 93##BC020837|ZNF93|81931|zinc finger protein 93##BC070372|ZNF93|81931|zinc finger protein 93##BC107581|ZNF93|81931|zinc finger protein 93##AK096342|ZNF93|81931|zinc finger protein 93##BC058821|ZNF93|81931|zinc finger protein 93##BC038096|ZNF93|81931|zinc finger protein 93##BC136718|ZNF93|81931|zinc finger protein 93##BC136719|ZNF93|81931|zinc finger protein 93##BC053607|ZNF253|56242|zinc finger protein 253##BC014148|ZNF253|56242|zinc finger protein 253##NM_021047|ZNF253|56242|zinc finger protein 253##BC065572|ZNF253|56242|zinc finger protein 253##AK074757|ZNF253|56242|zinc finger protein 253##BC125063|ZNF253|56242|zinc finger protein 253##BC125064|ZNF253|56242|zinc finger protein 253##AL136548|ZNF506|440515|zinc finger protein 506##BC018100|ZNF506|440515|zinc finger protein 506##BC034920|ZNF506|440515|zinc finger protein 506##AK122848|ZNF506|440515|zinc finger protein 506##AK095575|ZNF506|440515|zinc finger protein 506##NM_001099269|ZNF506|440515|zinc finger protein 506##NM_001145404|ZNF506|440515|zinc finger protein 506##AK098164|ZNF682|91120|zinc finger protein 682##NM_001077349|ZNF682|91120|zinc finger protein 682##AK027845|ZNF682|91120|zinc finger protein 682##AK096571|ZNF682|91120|zinc finger protein 682##NM_033196|ZNF682|91120|zinc finger protein 682##NM_007138|ZNF90|7643|zinc finger protein 90##AK298173|ZNF90|7643|zinc finger protein 90##M61870|ZNF90|7643|zinc finger protein 90##BC137211|ZNF90|7643|zinc finger protein 90	0.80299	CTCF.p2:12:0.803
chr19	52160298	52160428	reg1004327.p1	13.926	+	AY358369 AY854038 AK298284 NM_001098612	-10294	-	DQ892433 AF170484 BC029896 AK225753 U71383 NM_003830	-26706	-	NM_007147 BC007778 AK292687 BC052997 D50419	-85816	+	NM_001523 U59269 BC035837 AM904814	66869	-	M60626 S49810 M60627 BC005315 NM_001193306 NM_002029 AK314935	94767	-	NM_001005738 M88107 D10922 AK290557	104095	+	AY854038|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##AK298284|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##NM_001098612|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##DQ892433|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AF170484|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##BC029896|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AK225753|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##U71383|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_003830|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_007147|ZNF175|7728|zinc finger protein 175##BC007778|ZNF175|7728|zinc finger protein 175##AK292687|ZNF175|7728|zinc finger protein 175##BC052997|ZNF175|7728|zinc finger protein 175##D50419|ZNF175|7728|zinc finger protein 175##NM_001523|HAS1|3036|hyaluronan synthase 1##U59269|HAS1|3036|hyaluronan synthase 1##BC035837|HAS1|3036|hyaluronan synthase 1##AM904814|HAS1|3036|hyaluronan synthase 1##M60626|FPR1|2357|formyl peptide receptor 1##S49810|FPR1|2357|formyl peptide receptor 1##M60627|FPR1|2357|formyl peptide receptor 1##BC005315|FPR1|2357|formyl peptide receptor 1##NM_001193306|FPR1|2357|formyl peptide receptor 1##NM_002029|FPR1|2357|formyl peptide receptor 1##AK314935|FPR1|2357|formyl peptide receptor 1##NM_001005738|FPR2|2358|formyl peptide receptor 2##M88107|FPR2|2358|formyl peptide receptor 2##D10922|FPR2|2358|formyl peptide receptor 2##AK290557|FPR2|2358|formyl peptide receptor 2	0.994615	CTCF.p2:25:0.969
chr11	33384027	33384182	reg1004974.p1	13.925	+	TSC_hg19_v1_chr11_+_33363104 AK304063	-20960	+	TSC_hg19_v1_chr11_+_33350077 AY425958	-33994	+	TSC_hg19_v1_chr11_+_33279873 AK293009	-104235	+	TSC_hg19_v1_chr11_+_33563772 AK124395 NM_012194	179720	+	NM_001166692	338181	-	AK309894 NM_001127223 NM_001127225 NM_001127226	360168	-	AK304063|HIPK3|10114|homeodomain interacting protein kinase 3##AY425958|HIPK3|10114|homeodomain interacting protein kinase 3##AK293009|HIPK3|10114|homeodomain interacting protein kinase 3##AK124395|C11orf41|25758|chromosome 11 open reading frame 41##NM_012194|C11orf41|25758|chromosome 11 open reading frame 41##NM_001166692|C11orf91|100131378|chromosome 11 open reading frame 91##AK309894|CD59|966|CD59 molecule, complement regulatory protein##NM_001127223|CD59|966|CD59 molecule, complement regulatory protein##NM_001127225|CD59|966|CD59 molecule, complement regulatory protein##NM_001127226|CD59|966|CD59 molecule, complement regulatory protein	0.690799	CTCF.p2:-7:0.691
chr12	9860894	9861019	reg1004483.p1	13.924	+	BC063128 NM_001197318 NM_013269 AK310150 NM_001004419 AK310554 AK313554 BC019883 AF133299 AF285087 CU676474 FN813349 FN813350 FN813351 NM_001197317 NM_001197319	-38689	+	TSC_hg19_v1_chr12_+_9800760 AK096274	-60060	+	BC027885 BC113997 BC114516 U11276 NM_002258 AK292022	-100460	-	AF518873 BC093857 BC093859 NM_001253748 NM_001253750 NM_172004	24920	-	AY238518 CU675505 DQ893175 DQ896474 L07555 AK291869 AK303174 AK303383 BC007037 NM_001781 Z22576	52499	-	AF175206 AF175207 AF267244 AF267245 NM_016523 AJ305370 BC096734 BC098166 BC098257 BC098354	119140	+	BC063128|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D##NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D##AK310150|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D##AK310554|CLEC2D|29121|C-type lectin domain family 2, member D##AK313554|CLEC2D|29121|C-type lectin domain family 2, member D##BC019883|CLEC2D|29121|C-type lectin domain family 2, member D##AF133299|CLEC2D|29121|C-type lectin domain family 2, member D##AF285087|CLEC2D|29121|C-type lectin domain family 2, member D##FN813349|CLEC2D|29121|C-type lectin domain family 2, member D##FN813350|CLEC2D|29121|C-type lectin domain family 2, member D##FN813351|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D##AK096274|LOC374443|374443|CLR pseudogene##BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AF518873|CLECL1|160365|C-type lectin-like 1##BC093857|CLECL1|160365|C-type lectin-like 1##BC093859|CLECL1|160365|C-type lectin-like 1##NM_001253748|CLECL1|160365|C-type lectin-like 1##NM_001253750|CLECL1|160365|C-type lectin-like 1##NM_172004|CLECL1|160365|C-type lectin-like 1##AY238518|CD69|969|CD69 molecule##DQ893175|CD69|969|CD69 molecule##DQ896474|CD69|969|CD69 molecule##L07555|CD69|969|CD69 molecule##AK291869|CD69|969|CD69 molecule##AK303174|CD69|969|CD69 molecule##AK303383|CD69|969|CD69 molecule##BC007037|CD69|969|CD69 molecule##NM_001781|CD69|969|CD69 molecule##Z22576|CD69|969|CD69 molecule##AF175206|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF175207|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267244|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267245|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##NM_016523|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AJ305370|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC096734|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098166|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098257|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098354|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1	0.167475	
chr10	23603831	23603955	reg1003900.p1	13.923	+	AB463998 NM_178161	-122435	+	BC117471 BC130380 NM_012228 BC018030 TSC_hg19_v1_chr10_+_23384507 AF151889 BC066305 AF122004 EU446941	-219410	+	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	-386912	+	BC035732 NM_153714	29878	-	AB188491 NM_001145373 TSC_hg19_v1_chr10_+_23728216	124317	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	379784	+	NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a##BC117471|MSRB2|22921|methionine sulfoxide reductase B2##BC130380|MSRB2|22921|methionine sulfoxide reductase B2##NM_012228|MSRB2|22921|methionine sulfoxide reductase B2##BC018030|MSRB2|22921|methionine sulfoxide reductase B2##AF151889|MSRB2|22921|methionine sulfoxide reductase B2##BC066305|MSRB2|22921|methionine sulfoxide reductase B2##AF122004|MSRB2|22921|methionine sulfoxide reductase B2##EU446941|MSRB2|22921|methionine sulfoxide reductase B2##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67##AB188491|OTUD1|220213|OTU domain containing 1##NM_001145373|OTUD1|220213|OTU domain containing 1##AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217	0.98788	CTCF.p2:5:0.988
chr3	187036730	187036872	reg1004377.p1	13.923	+	BC106945 BC106946 TSC_hg19_v1_chr3_-_187009489 AK291686 AK129893 AK304334 AK300663 BX647237 AK291157 CR749615 BC039724 NM_001031849 NM_001879 NM_139125	-27162	-	BC065202 NM_153708 BC034744 DQ890807 DQ893962 AY562235	-121459	+	TSC_hg19_v1_chr3_-_186857285 L05096 AB063610 BC012328 NM_052969	-179545	-	BC013161 NM_022147 AJ251832 AY562238 DQ891046 DQ894225	49397	+	BC032625 AK312177 TSC_hg19_v1_chr3_-_187388181 NM_001048	351351	-	BC068081 NM_001004312	383543	-	BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1##NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1##BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1##AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1##L05096|RPL39L|116832|ribosomal protein L39-like##AB063610|RPL39L|116832|ribosomal protein L39-like##BC012328|RPL39L|116832|ribosomal protein L39-like##NM_052969|RPL39L|116832|ribosomal protein L39-like##BC013161|RTP4|64108|receptor (chemosensory) transporter protein 4##NM_022147|RTP4|64108|receptor (chemosensory) transporter protein 4##AJ251832|RTP4|64108|receptor (chemosensory) transporter protein 4##AY562238|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ891046|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ894225|RTP4|64108|receptor (chemosensory) transporter protein 4##BC032625|SST|6750|somatostatin##AK312177|SST|6750|somatostatin##NM_001048|SST|6750|somatostatin##BC068081|RTP2|344892|receptor (chemosensory) transporter protein 2##NM_001004312|RTP2|344892|receptor (chemosensory) transporter protein 2	0.952512	CTCF.p2:-14:0.953
chr12	125391420	125391551	reg1004382.p1	13.922	+	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	-43012	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	-43108	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	-43180	-	AY732488 AY819759 BC008955 BC080583 AB209782 BC000449 AK056939 AK098827 AK129749 AK291539 BC039193 BC093445 AB009010 TSC_hg19_v1_chr12_-_125399197 AK026846	7688	-	NM_021009	8101	-	TSC_hg19_v1_chr12_-_125473644 BC037964 NM_032656	82159	-	NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AY732488|UBC|7316|ubiquitin C##AY819759|UBC|7316|ubiquitin C##BC008955|UBC|7316|ubiquitin C##BC080583|UBC|7316|ubiquitin C##AB209782|UBC|7316|ubiquitin C##BC000449|UBC|7316|ubiquitin C##AK056939|UBC|7316|ubiquitin C##AK098827|UBC|7316|ubiquitin C##AK129749|UBC|7316|ubiquitin C##AK291539|UBC|7316|ubiquitin C##BC039193|UBC|7316|ubiquitin C##BC093445|UBC|7316|ubiquitin C##AB009010|UBC|7316|ubiquitin C##AK026846|UBC|7316|ubiquitin C##NM_021009|UBC|7316|ubiquitin C##BC037964|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37##NM_032656|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37	0.211547	CTCF.p2:23:0.212
chr1	32986141	32986264	reg1004157.p1	13.922	+	TSC_hg19_v1_chr1_+_32930659 AK092326 AX747483 NM_001145720	-55550	+	CR457252 TSC_hg19_v1_chr1_-_32860030 BC010573 CR749228 BX641056 AK300231 BC026322 AK297604 AK300306 AK001138 AK225717 AK293454 BC028381 AK021440 AK297352 AK225026 AK304477 AK316172 NM_001143888 NM_001143889 NM_001143890 NM_018045	-126165	-	NM_001167676	-158359	-	NM_001040441	18569	+	TSC_hg19_v1_chr1_+_33005058 AK074546 AY157873 BC015239	18842	+	AY099494 TSC_hg19_v1_chr1_-_33116147 BC058843 AY158005 AY099493 AY151084 AY151085 NM_178547	129935	-	NM_001145720|ZBTB8B|728116|zinc finger and BTB domain containing 8B##CR457252|BSDC1|55108|BSD domain containing 1##BC010573|BSDC1|55108|BSD domain containing 1##CR749228|BSDC1|55108|BSD domain containing 1##BX641056|BSDC1|55108|BSD domain containing 1##AK300231|BSDC1|55108|BSD domain containing 1##BC026322|BSDC1|55108|BSD domain containing 1##AK297604|BSDC1|55108|BSD domain containing 1##AK300306|BSDC1|55108|BSD domain containing 1##AK001138|BSDC1|55108|BSD domain containing 1##AK225717|BSDC1|55108|BSD domain containing 1##AK293454|BSDC1|55108|BSD domain containing 1##BC028381|BSDC1|55108|BSD domain containing 1##AK021440|BSDC1|55108|BSD domain containing 1##AK297352|BSDC1|55108|BSD domain containing 1##AK225026|BSDC1|55108|BSD domain containing 1##AK304477|BSDC1|55108|BSD domain containing 1##AK316172|BSDC1|55108|BSD domain containing 1##NM_001143888|BSDC1|55108|BSD domain containing 1##NM_001143889|BSDC1|55108|BSD domain containing 1##NM_001143890|BSDC1|55108|BSD domain containing 1##NM_018045|BSDC1|55108|BSD domain containing 1##NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071##NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A##AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A##AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A##BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A##AY099494|ZBTB8OS|339487|zinc finger and BTB domain containing 8 opposite strand##BC058843|ZBTB8OS|339487|zinc finger and BTB domain containing 8 opposite strand##AY158005|ZBTB8OS|339487|zinc finger and BTB domain containing 8 opposite strand##AY099493|ZBTB8OS|339487|zinc finger and BTB domain containing 8 opposite strand##AY151084|ZBTB8OS|339487|zinc finger and BTB domain containing 8 opposite strand##AY151085|ZBTB8OS|339487|zinc finger and BTB domain containing 8 opposite strand##NM_178547|ZBTB8OS|339487|zinc finger and BTB domain containing 8 opposite strand	0.584361	CTCF.p2:1:0.584
chr3	157583279	157583399	reg1002616.p1	13.922	+	NM_001099777 NM_001130001 NM_001130002 NM_001243729 BC126187 BC126189 BC144066 BC029129 BC010062	-322157	+	BC078142 BC057999 NM_001167915 NM_001167916	-361951	-	BC111017 AB051479 NM_001167911 NM_001167912	-362208	-	TSC_hg19_v1_chr3_-_157823531 AK309293	240200	-	HQ258019 AJ002367 TSC_hg19_v1_chr3_-_157823847 BC008829 NM_001163678 NM_003030 NM_006884	240544	-	TSC_hg19_v1_chr3_+_157827910 AK290334 BC006982 NM_016625 AF208853 BC010357	244552	+	NM_001099777|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130001|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130002|C3orf55|152078|chromosome 3 open reading frame 55##NM_001243729|C3orf55|152078|chromosome 3 open reading frame 55##BC126187|C3orf55|152078|chromosome 3 open reading frame 55##BC126189|C3orf55|152078|chromosome 3 open reading frame 55##BC144066|C3orf55|152078|chromosome 3 open reading frame 55##BC029129|C3orf55|152078|chromosome 3 open reading frame 55##BC010062|C3orf55|152078|chromosome 3 open reading frame 55##BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##HQ258019|SHOX2|6474|short stature homeobox 2##AJ002367|SHOX2|6474|short stature homeobox 2##BC008829|SHOX2|6474|short stature homeobox 2##NM_001163678|SHOX2|6474|short stature homeobox 2##NM_003030|SHOX2|6474|short stature homeobox 2##NM_006884|SHOX2|6474|short stature homeobox 2##AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1##NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1##AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1	0.88365	CTCF.p2:-17:0.884
chr10	32545703	32545855	reg1004814.p1	13.921	+	TSC_hg19_v1_chr10_-_32345341 NM_004521	-200419	-	TSC_hg19_v1_chr10_-_32345335 BC080604 BC010885 BC111042 AK289413 AK299542 BC065267 AK307502	-200465	-	BC126279 BC126281 TSC_hg19_v1_chr10_-_32345152 X65873	-200611	-	CU691366 TSC_hg19_v1_chr10_-_32636082 AK092304 AX747467 AK309822	90183	-	TSC_hg19_v1_chr10_-_32636116 AF277374 FJ230887 NM_025209	90329	-	TSC_hg19_v1_chr10_-_32636137 BC036529 CR749375	90370	-	NM_004521|KIF5B|3799|kinesin family member 5B##BC080604|KIF5B|3799|kinesin family member 5B##BC010885|KIF5B|3799|kinesin family member 5B##BC111042|KIF5B|3799|kinesin family member 5B##AK289413|KIF5B|3799|kinesin family member 5B##AK299542|KIF5B|3799|kinesin family member 5B##BC065267|KIF5B|3799|kinesin family member 5B##AK307502|KIF5B|3799|kinesin family member 5B##BC126279|KIF5B|3799|kinesin family member 5B##BC126281|KIF5B|3799|kinesin family member 5B##X65873|KIF5B|3799|kinesin family member 5B##AK092304|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AK309822|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AF277374|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##NM_025209|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##BC036529|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##CR749375|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	0.977011	CTCF.p2:-7:0.977
chr11	8359709	8359852	reg1004824.p1	13.921	+	BC069752 BC069793 M26682 NM_002315	-74428	-	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	-169217	-	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-256981	+	AK093251 AX748014 BC031231 NM_030906	255677	-	AK293193 TSC_hg19_v1_chr11_-_8615705	255923	-	TSC_hg19_v1_chr11_-_8615752 AK092720 AX747689 AK310754	255995	-	BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33##AK293193|STK33|65975|serine/threonine kinase 33##AK092720|STK33|65975|serine/threonine kinase 33##AK310754|STK33|65975|serine/threonine kinase 33	0.997425	CTCF.p2:7:0.997
chr1	153650307	153650413	reg1002330.p1	13.919	+	TSC_hg19_v1_chr1_-_153643490 NM_004515	-6870	-	TSC_hg19_v1_chr1_-_153643464 AK313364 AK310615	-6897	-	TSC_hg19_v1_chr1_-_153643449 U10323 AK302214	-6917	-	TSC_hg19_v1_chr1_+_153651222 BC063304 AK025024 NM_000906 X15357	936	+	TSC_hg19_v1_chr1_+_153700548 BX640950 CR749376 CR627233 BC116458 AK290025 CR749212 BX640786 NM_023015	50193	+	BC003041 BC009916 NM_024330 AK075377 TSC_hg19_v1_chr1_+_153747897 AK123997 AY358409 AK074134 DQ893429 DQ895951 AK027499 BC029792	97506	+	NM_004515|ILF2|3608|interleukin enhancer binding factor 2, 45kDa##AK313364|ILF2|3608|interleukin enhancer binding factor 2, 45kDa##AK310615|ILF2|3608|interleukin enhancer binding factor 2, 45kDa##U10323|ILF2|3608|interleukin enhancer binding factor 2, 45kDa##AK302214|ILF2|3608|interleukin enhancer binding factor 2, 45kDa##BC063304|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##AK025024|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##NM_000906|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##X15357|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##BX640950|INTS3|65123|integrator complex subunit 3##CR749376|INTS3|65123|integrator complex subunit 3##CR627233|INTS3|65123|integrator complex subunit 3##BC116458|INTS3|65123|integrator complex subunit 3##AK290025|INTS3|65123|integrator complex subunit 3##CR749212|INTS3|65123|integrator complex subunit 3##BX640786|INTS3|65123|integrator complex subunit 3##NM_023015|INTS3|65123|integrator complex subunit 3##BC003041|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC009916|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##NM_024330|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK075377|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK123997|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AY358409|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK074134|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ893429|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ895951|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK027499|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC029792|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3	0.829714	CTCF.p2:-17:0.830
chr18	29321245	29321386	reg1004922.p1	13.919	+	AB024742 BC074835 BC074884 BC069620 BC069642 AF069054 AK314860 AF097159 NM_004775	-56776	-	NM_000371 TSC_hg19_v1_chr18_+_29171839 AK312051 BC005310 BC020791 D00096 GU727633 K02091 M10605 X59498 AF162690 BT007189 CR456908 DQ778081 DQ839490 U19780	-149518	+	NM_001943 TSC_hg19_v1_chr18_+_29078205 BC099655 BC099656 BC099657 Z26317 AK308408	-243172	+	BC103999 BC104000 BC104001 AK302337 NM_001034172	19455	-	BC127109 BC127110 TSC_hg19_v1_chr18_-_29523061	201709	-	TSC_hg19_v1_chr18_-_29523064 BC059380 AK292537	201752	-	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##NM_000371|TTR|7276|transthyretin##AK312051|TTR|7276|transthyretin##BC005310|TTR|7276|transthyretin##BC020791|TTR|7276|transthyretin##D00096|TTR|7276|transthyretin##GU727633|TTR|7276|transthyretin##K02091|TTR|7276|transthyretin##M10605|TTR|7276|transthyretin##X59498|TTR|7276|transthyretin##AF162690|TTR|7276|transthyretin##BT007189|TTR|7276|transthyretin##CR456908|TTR|7276|transthyretin##DQ839490|TTR|7276|transthyretin##U19780|TTR|7276|transthyretin##NM_001943|DSG2|1829|desmoglein 2##BC099655|DSG2|1829|desmoglein 2##BC099656|DSG2|1829|desmoglein 2##BC099657|DSG2|1829|desmoglein 2##Z26317|DSG2|1829|desmoglein 2##AK308408|DSG2|1829|desmoglein 2##BC103999|MCART2|147407|mitochondrial carrier triple repeat 2##BC104000|MCART2|147407|mitochondrial carrier triple repeat 2##BC104001|MCART2|147407|mitochondrial carrier triple repeat 2##AK302337|MCART2|147407|mitochondrial carrier triple repeat 2##NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2##BC127109|TRAPPC8|22878|trafficking protein particle complex 8##BC127110|TRAPPC8|22878|trafficking protein particle complex 8##BC059380|TRAPPC8|22878|trafficking protein particle complex 8##AK292537|TRAPPC8|22878|trafficking protein particle complex 8	0.997374	CTCF.p2:-8:0.997
chr1	199653933	199654051	reg1004168.p1	13.918	+	TSC_hg19_v1_chr1_-_198906559 EF413001	-747445	-	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-1045662	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-1045767	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	342877	+	AK316513 TSC_hg19_v1_chr1_+_200011716	357732	+	NM_001105517	528663	+	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene	0.931054	CTCF.p2:-6:0.931
chr19	16177480	16177619	reg1004368.p1	13.917	+	BC031284 TSC_hg19_v1_chr19_+_16145007	-32581	+	NM_001004465	-117732	+	TSC_hg19_v1_chr19_-_16045678 BC016853 NM_001128932 NM_021187	-131876	-	TSC_hg19_v1_chr19_+_16178347 NM_001145160 AK023385	711	+	TSC_hg19_v1_chr19_+_16187132 NM_003290	9551	+	TSC_hg19_v1_chr19_+_16187304 BC037576 AK300136 AK307538 AK301285	9736	+	BC031284|FLJ25328|148231|uncharacterized LOC148231##NM_001004465|OR10H4|126541|olfactory receptor, family 10, subfamily H, member 4##BC016853|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_001128932|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_021187|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_001145160|TPM4|7171|tropomyosin 4##AK023385|TPM4|7171|tropomyosin 4##NM_003290|TPM4|7171|tropomyosin 4##BC037576|TPM4|7171|tropomyosin 4##AK300136|TPM4|7171|tropomyosin 4##AK307538|TPM4|7171|tropomyosin 4##AK301285|TPM4|7171|tropomyosin 4	0.712336	CTCF.p2:-16:0.712
chr1	145542982	145543128	reg1005392.p1	13.915	+	AK314255 TSC_hg19_v1_chr1_+_145525041 AF074015	-18010	+	AF112345 NM_003637 BC140831 BC144637 TSC_hg19_v1_chr1_+_145525029 AK304155 AK304183	-18044	+	NM_001184795 AK301983	-26476	+	NM_144698 AK294308 AK091120 AK296861 AX746788 BC101618 BC101620	6179	+	TSC_hg19_v1_chr1_+_145562305 AK057853	19254	+	TSC_hg19_v1_chr1_+_145575289 AK304039	32191	+	AK314255|ITGA10|8515|integrin, alpha 10##AF074015|ITGA10|8515|integrin, alpha 10##AF112345|ITGA10|8515|integrin, alpha 10##NM_003637|ITGA10|8515|integrin, alpha 10##BC140831|ITGA10|8515|integrin, alpha 10##BC144637|ITGA10|8515|integrin, alpha 10##AK304155|ITGA10|8515|integrin, alpha 10##AK304183|ITGA10|8515|integrin, alpha 10##NM_001184795|PEX11B|8799|peroxisomal biogenesis factor 11 beta##AK301983|PEX11B|8799|peroxisomal biogenesis factor 11 beta##NM_144698|ANKRD35|148741|ankyrin repeat domain 35##AK294308|ANKRD35|148741|ankyrin repeat domain 35##AK091120|ANKRD35|148741|ankyrin repeat domain 35##AK296861|ANKRD35|148741|ankyrin repeat domain 35##BC101618|ANKRD35|148741|ankyrin repeat domain 35##BC101620|ANKRD35|148741|ankyrin repeat domain 35##AK057853|ANKRD35|148741|ankyrin repeat domain 35##AK304039|PIAS3|10401|protein inhibitor of activated STAT, 3	0.061378	
chr1	235416624	235416765	reg1004751.p1	13.914	+	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	-92131	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	-124463	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	-124605	-	AB210032 NM_001206794	74107	-	BC130418 BC143719 TSC_hg19_v1_chr1_-_235491484 BC062536 BX648820	74773	-	TSC_hg19_v1_chr1_-_235491491 BC048959	74797	-	D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AB210032|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##NM_001206794|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##BC130418|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##BC143719|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##BC062536|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##BX648820|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##BC048959|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)	0.908228	CTCF.p2:-13:0.908
chr16	87883685	87883835	reg1004817.p1	13.914	+	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	-84190	-	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	-84245	-	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	-247050	+	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	19315	-	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	86387	-	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	101408	+	BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##BC001044|KLHDC4|54758|kelch domain containing 4##DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3##DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein	1.299222	CTCF.p2:-1:1.000	CTCF.p2:-91:0.299
chr16	81907590	81907723	reg1004750.p1	13.913	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-94726	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-94754	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	-94759	+	BC019670 AK315652 AK026740 NM_145168	137412	-	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	161205	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	161276	+	BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.973574	CTCF.p2:13:0.974
chr5	140998747	140998882	reg1004239.p1	13.913	+	TSC_hg19_v1_chr5_-_140998568 NM_001079812 NM_005219	-211	-	TSC_hg19_v1_chr5_-_140998564 AK304291	-250	-	TSC_hg19_v1_chr5_-_140998562 AB209482	-253	-	AY429537 AY429538 CU674298 AB463738 DQ891916 DQ895101 U66914 AF039703 TSC_hg19_v1_chr5_-_141016417 U75697 BC000614 NM_003883	17573	-	AK054889 NM_001130029 NM_173828 TSC_hg19_v1_chr5_+_141016548	17723	+	TSC_hg19_v1_chr5_+_141016567 BC027919 AY358163	17765	+	NM_001079812|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##NM_005219|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AK304291|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AB209482|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AY429537|HDAC3|8841|histone deacetylase 3##AY429538|HDAC3|8841|histone deacetylase 3##DQ891916|HDAC3|8841|histone deacetylase 3##DQ895101|HDAC3|8841|histone deacetylase 3##U66914|HDAC3|8841|histone deacetylase 3##AF039703|HDAC3|8841|histone deacetylase 3##U75697|HDAC3|8841|histone deacetylase 3##BC000614|HDAC3|8841|histone deacetylase 3##NM_003883|HDAC3|8841|histone deacetylase 3##AK054889|RELL2|285613|RELT-like 2##NM_001130029|RELL2|285613|RELT-like 2##NM_173828|RELL2|285613|RELT-like 2##BC027919|RELL2|285613|RELT-like 2##AY358163|RELL2|285613|RELT-like 2	0.989827	CTCF.p2:14:0.990
chr11	62462293	62462409	reg1002635.p2	13.912	+	NM_203422	-4981	-	AK291334 TSC_hg19_v1_chr11_-_62457003 AY358354 BC053902 AL834319	-5251	-	AK054832 AK300542 AK303471 TSC_hg19_v1_chr11_-_62446546 BC040129 AK297856	-15791	-	TSC_hg19_v1_chr11_-_62472904 CU678804 CU680238 CU692014	10591	-	TSC_hg19_v1_chr11_-_62473729 BC041640 BC012140 BC004911 AK075317 AK225029 AK027524 NM_001130702 NM_032667	11345	-	CU679517 DQ893483 EU176769 TSC_hg19_v1_chr11_-_62474716 BC093048	12345	-	NM_203422|LRRN4CL|221091|LRRN4 C-terminal like##AK291334|LRRN4CL|221091|LRRN4 C-terminal like##AY358354|LRRN4CL|221091|LRRN4 C-terminal like##BC053902|LRRN4CL|221091|LRRN4 C-terminal like##AL834319|LRRN4CL|221091|LRRN4 C-terminal like##AK054832|UBXN1|51035|UBX domain protein 1##AK300542|UBXN1|51035|UBX domain protein 1##AK303471|UBXN1|51035|UBX domain protein 1##BC040129|UBXN1|51035|UBX domain protein 1##AK297856|UBXN1|51035|UBX domain protein 1##BC041640|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##BC012140|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##BC004911|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK075317|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK225029|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK027524|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##NM_001130702|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##NM_032667|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##DQ893483|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##EU176769|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##BC093048|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	0.997489	CTCF.p2:0:0.997
chr13	48701159	48701289	reg1002850.p1	13.911	+	TSC_hg19_v1_chr13_-_48669241 AK001934 AK222713 NM_014166 AK301835 BC005189	-31955	-	AK223017 TSC_hg19_v1_chr13_-_48669236 AF161475	-31990	-	AF230381 AF300618 CR457276 CR541830 DQ893076 DQ896333 TSC_hg19_v1_chr13_-_48669222	-32003	-	TSC_hg19_v1_chr13_+_48807293 NM_021999 BC018053 AF092128 AF136973	106054	+	TSC_hg19_v1_chr13_+_48807341 AF152462 AF246221 BC016148 AK000503 AK027411 AK130048 BC000554 AF086918	106120	+	AB527639 DQ890591 DQ893759 CU674270 BT006863 TSC_hg19_v1_chr13_+_48807572	106309	+	AK001934|MED4|29079|mediator complex subunit 4##AK222713|MED4|29079|mediator complex subunit 4##NM_014166|MED4|29079|mediator complex subunit 4##AK301835|MED4|29079|mediator complex subunit 4##BC005189|MED4|29079|mediator complex subunit 4##AK223017|MED4|29079|mediator complex subunit 4##AF161475|MED4|29079|mediator complex subunit 4##AF230381|MED4|29079|mediator complex subunit 4##AF300618|MED4|29079|mediator complex subunit 4##CR457276|MED4|29079|mediator complex subunit 4##CR541830|MED4|29079|mediator complex subunit 4##DQ893076|MED4|29079|mediator complex subunit 4##DQ896333|MED4|29079|mediator complex subunit 4##NM_021999|ITM2B|9445|integral membrane protein 2B##BC018053|ITM2B|9445|integral membrane protein 2B##AF092128|ITM2B|9445|integral membrane protein 2B##AF136973|ITM2B|9445|integral membrane protein 2B##AF152462|ITM2B|9445|integral membrane protein 2B##AF246221|ITM2B|9445|integral membrane protein 2B##BC016148|ITM2B|9445|integral membrane protein 2B##AK000503|ITM2B|9445|integral membrane protein 2B##AK027411|ITM2B|9445|integral membrane protein 2B##AK130048|ITM2B|9445|integral membrane protein 2B##BC000554|ITM2B|9445|integral membrane protein 2B##AF086918|ITM2B|9445|integral membrane protein 2B##DQ890591|ITM2B|9445|integral membrane protein 2B##DQ893759|ITM2B|9445|integral membrane protein 2B##BT006863|ITM2B|9445|integral membrane protein 2B	0.949618	CTCF.p2:-16:0.950
chr1	172413221	172413353	reg1003944.p1	13.910	+	TSC_hg19_v1_chr1_-_172413210 AL035301 BC063473 NM_002642 NM_153747	-59	-	TSC_hg19_v1_chr1_-_172413207 AK308201	-80	-	TSC_hg19_v1_chr1_-_172413202 BC006539	-99	-	TSC_hg19_v1_chr1_+_172502152 AK302949 AJ250075 NM_014283	88855	+	TSC_hg19_v1_chr1_+_172502291 NM_016227 AK302509 AL035291 BC137125 BC144487	89094	+	D38122 AK314874 NM_000639 X89102 BC017502 U08137 AF288573 U11821 AB528416 DQ893466 DQ896147 CU675998 AY225406 AY858799	214962	+	AL035301|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##BC063473|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##NM_002642|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##NM_153747|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK302949|C1orf9|51430|chromosome 1 open reading frame 9##AJ250075|C1orf9|51430|chromosome 1 open reading frame 9##NM_014283|C1orf9|51430|chromosome 1 open reading frame 9##NM_016227|C1orf9|51430|chromosome 1 open reading frame 9##AK302509|C1orf9|51430|chromosome 1 open reading frame 9##AL035291|C1orf9|51430|chromosome 1 open reading frame 9##BC137125|C1orf9|51430|chromosome 1 open reading frame 9##BC144487|C1orf9|51430|chromosome 1 open reading frame 9##D38122|FASLG|356|Fas ligand (TNF superfamily, member 6)##AK314874|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_000639|FASLG|356|Fas ligand (TNF superfamily, member 6)##X89102|FASLG|356|Fas ligand (TNF superfamily, member 6)##BC017502|FASLG|356|Fas ligand (TNF superfamily, member 6)##U08137|FASLG|356|Fas ligand (TNF superfamily, member 6)##AF288573|FASLG|356|Fas ligand (TNF superfamily, member 6)##U11821|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ893466|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ896147|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY225406|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY858799|FASLG|356|Fas ligand (TNF superfamily, member 6)	0.994502	CTCF.p2:9:0.995
chr3	14822545	14822674	reg1003998.p1	13.909	+	NM_001184957 NM_001184958 NM_032137 AK131481 BC030599 AL834386 AL136781 BC038406	-105964	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	-129326	+	TSC_hg19_v1_chr3_+_14693268 NM_016474 AK091158 AX746816 BC005199 BC033897 BC013999	-129351	+	NM_152536	37859	+	TSC_hg19_v1_chr3_-_14988966 BC014104 BC063441 BC039246	166347	-	TSC_hg19_v1_chr3_-_14989000 AK055924	166428	-	NM_001184957|C3orf20|84077|chromosome 3 open reading frame 20##NM_001184958|C3orf20|84077|chromosome 3 open reading frame 20##NM_032137|C3orf20|84077|chromosome 3 open reading frame 20##AK131481|C3orf20|84077|chromosome 3 open reading frame 20##BC030599|C3orf20|84077|chromosome 3 open reading frame 20##AL834386|C3orf20|84077|chromosome 3 open reading frame 20##AL136781|C3orf20|84077|chromosome 3 open reading frame 20##BC038406|C3orf20|84077|chromosome 3 open reading frame 20##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19##NM_016474|C3orf19|51244|chromosome 3 open reading frame 19##AK091158|C3orf19|51244|chromosome 3 open reading frame 19##BC005199|C3orf19|51244|chromosome 3 open reading frame 19##BC033897|C3orf19|51244|chromosome 3 open reading frame 19##BC013999|C3orf19|51244|chromosome 3 open reading frame 19##NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5##BC014104|LOC100505641|100505641|uncharacterized LOC100505641##BC063441|LOC100505641|100505641|uncharacterized LOC100505641##BC039246|LOC100505641|100505641|uncharacterized LOC100505641##AK055924|LOC100505641|100505641|uncharacterized LOC100505641	0.189744	
chr3	195586315	195586437	reg1002654.p1	13.908	+	EF091824 AJ242549 AJ242550 AJ276359 AJ277412 AJ277505 AJ400633 AJ400849 AJ400850 AJ400851 AJ400852 AJ400853 AJ400854 AJ400855 AJ400856 AJ400857 AJ400858 TSC_hg19_v1_chr3_-_195538801 AK307054 NM_004532 NM_018406 NM_138297	-47605	-	NM_001098516	-135279	+	TSC_hg19_v1_chr3_+_195447848 AY358449 AK075138 BC029267 AK027314 BC044243 CU688620 CU692194	-138532	+	BC008884 AK225786 BC020389 TSC_hg19_v1_chr3_-_195619679	33189	-	AK131539 NM_001010938	36055	-	NM_005781 L13738	49540	-	EF091824|MUC4|4585|mucin 4, cell surface associated##AJ242549|MUC4|4585|mucin 4, cell surface associated##AJ242550|MUC4|4585|mucin 4, cell surface associated##AJ276359|MUC4|4585|mucin 4, cell surface associated##AJ277412|MUC4|4585|mucin 4, cell surface associated##AJ277505|MUC4|4585|mucin 4, cell surface associated##AJ400633|MUC4|4585|mucin 4, cell surface associated##AJ400849|MUC4|4585|mucin 4, cell surface associated##AJ400850|MUC4|4585|mucin 4, cell surface associated##AJ400851|MUC4|4585|mucin 4, cell surface associated##AJ400852|MUC4|4585|mucin 4, cell surface associated##AJ400853|MUC4|4585|mucin 4, cell surface associated##AJ400854|MUC4|4585|mucin 4, cell surface associated##AJ400855|MUC4|4585|mucin 4, cell surface associated##AJ400856|MUC4|4585|mucin 4, cell surface associated##AJ400857|MUC4|4585|mucin 4, cell surface associated##AJ400858|MUC4|4585|mucin 4, cell surface associated##AK307054|MUC4|4585|mucin 4, cell surface associated##NM_004532|MUC4|4585|mucin 4, cell surface associated##NM_018406|MUC4|4585|mucin 4, cell surface associated##NM_138297|MUC4|4585|mucin 4, cell surface associated##NM_001098516|MUC20|200958|mucin 20, cell surface associated##AY358449|MUC20|200958|mucin 20, cell surface associated##AK075138|MUC20|200958|mucin 20, cell surface associated##BC029267|MUC20|200958|mucin 20, cell surface associated##AK027314|MUC20|200958|mucin 20, cell surface associated##BC044243|MUC20|200958|mucin 20, cell surface associated##BC008884|TNK2|10188|tyrosine kinase, non-receptor, 2##AK225786|TNK2|10188|tyrosine kinase, non-receptor, 2##BC020389|TNK2|10188|tyrosine kinase, non-receptor, 2##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_005781|TNK2|10188|tyrosine kinase, non-receptor, 2##L13738|TNK2|10188|tyrosine kinase, non-receptor, 2	0.889715	CTCF.p2:-6:0.890
chr3	24279626	24279772	reg1005498.p1	13.908	+	TSC_hg19_v1_chr3_+_23987516 AK301925 NM_001145425	-292137	+	TSC_hg19_v1_chr3_+_23986776 NM_005126 D16815 AK313464 BC045613 BC070035	-292884	+	NM_001253380 AY347528 L25899 AB529129 BT019672 CU677095 CU687134	-320427	+	GQ456948 GQ456949 GQ869479 GQ919288 AY286469 AY286468 AY286465 AY286471 TSC_hg19_v1_chr3_-_24536294 AY286467 AY286466 AK096628 M26747 NM_000461 NM_001128176 NM_001128177 NM_001252634 X04707	256545	-	AY286470 TSC_hg19_v1_chr3_-_24536493	256778	-	TSC_hg19_v1_chr3_+_25469751 AF157483 NM_016152	1190060	+	AK301925|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001145425|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001253380|RPL15|6138|ribosomal protein L15##AY347528|RPL15|6138|ribosomal protein L15##L25899|RPL15|6138|ribosomal protein L15##BT019672|RPL15|6138|ribosomal protein L15##GQ456948|THRB|7068|thyroid hormone receptor, beta##GQ456949|THRB|7068|thyroid hormone receptor, beta##GQ869479|THRB|7068|thyroid hormone receptor, beta##GQ919288|THRB|7068|thyroid hormone receptor, beta##AY286469|THRB|7068|thyroid hormone receptor, beta##AY286468|THRB|7068|thyroid hormone receptor, beta##AY286465|THRB|7068|thyroid hormone receptor, beta##AY286471|THRB|7068|thyroid hormone receptor, beta##AY286467|THRB|7068|thyroid hormone receptor, beta##AY286466|THRB|7068|thyroid hormone receptor, beta##AK096628|THRB|7068|thyroid hormone receptor, beta##M26747|THRB|7068|thyroid hormone receptor, beta##NM_000461|THRB|7068|thyroid hormone receptor, beta##NM_001128176|THRB|7068|thyroid hormone receptor, beta##NM_001128177|THRB|7068|thyroid hormone receptor, beta##NM_001252634|THRB|7068|thyroid hormone receptor, beta##X04707|THRB|7068|thyroid hormone receptor, beta##AY286470|THRB|7068|thyroid hormone receptor, beta##AF157483|RARB|5915|retinoic acid receptor, beta##NM_016152|RARB|5915|retinoic acid receptor, beta	0.98221	CTCF.p2:7:0.982
chr15	75335306	75335472	reg1002775.p1	13.907	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-19408	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-19461	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-47482	+	AK128205 TSC_hg19_v1_chr15_+_75491259	155857	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	158823	+	BC110367 TSC_hg19_v1_chr15_+_75494233	158844	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.99657	CTCF.p2:-40:0.997
chr1	70953692	70953804	reg1003574.p1	13.907	+	TSC_hg19_v1_chr1_+_70876950 NM_001190463 NM_001902 NM_153742 AK310269 AK303946 AK223376 BC015807 S52028 S52784 EU832313 EU832398 BT006882	-76768	+	TSC_hg19_v1_chr1_+_70820493 NM_001031693 NM_001036645 NM_001036646 AF126164 BC010922 AF126163	-133171	+	TSC_hg19_v1_chr1_-_70820406 BC016937 BC028840 AL136717 NM_030816	-133343	-	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	559631	-	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	592959	-	NM_005455 NM_203350	593223	-	NM_001190463|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001902|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_153742|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK310269|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK303946|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK223376|CTH|1491|cystathionase (cystathionine gamma-lyase)##BC015807|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52028|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52784|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832313|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832398|CTH|1491|cystathionase (cystathionine gamma-lyase)##BT006882|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001031693|HHLA3|11147|HERV-H LTR-associating 3##NM_001036645|HHLA3|11147|HERV-H LTR-associating 3##NM_001036646|HHLA3|11147|HERV-H LTR-associating 3##AF126164|HHLA3|11147|HERV-H LTR-associating 3##BC010922|HHLA3|11147|HERV-H LTR-associating 3##AF126163|HHLA3|11147|HERV-H LTR-associating 3##BC016937|ANKRD13C|81573|ankyrin repeat domain 13C##BC028840|ANKRD13C|81573|ankyrin repeat domain 13C##AL136717|ANKRD13C|81573|ankyrin repeat domain 13C##NM_030816|ANKRD13C|81573|ankyrin repeat domain 13C##AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2	0.0	
chr5	180586406	180586537	reg1003466.p2	13.907	+	NM_206880	-4529	+	AK298113 TSC_hg19_v1_chr5_+_180467271 BC062459	-119156	+	NM_152547 TSC_hg19_v1_chr5_+_180467233 AK057097 AY358358	-119234	+	AF396655 NM_203297	41458	-	AF396652 AF396653 NM_203294 NM_203295 NM_203296	44868	-	DQ892585 DQ895803 BC080553 BC011567 AK314872 AF396651 AX776005 BC132863 BC132867 NM_033342 NM_203293 TSC_hg19_v1_chr5_-_180632192 AF220032	45730	-	NM_206880|OR2V2|285659|olfactory receptor, family 2, subfamily V, member 2##AK298113|BTNL9|153579|butyrophilin-like 9##BC062459|BTNL9|153579|butyrophilin-like 9##NM_152547|BTNL9|153579|butyrophilin-like 9##AK057097|BTNL9|153579|butyrophilin-like 9##AY358358|BTNL9|153579|butyrophilin-like 9##AF396655|TRIM7|81786|tripartite motif containing 7##NM_203297|TRIM7|81786|tripartite motif containing 7##AF396652|TRIM7|81786|tripartite motif containing 7##AF396653|TRIM7|81786|tripartite motif containing 7##NM_203294|TRIM7|81786|tripartite motif containing 7##NM_203295|TRIM7|81786|tripartite motif containing 7##NM_203296|TRIM7|81786|tripartite motif containing 7##DQ892585|TRIM7|81786|tripartite motif containing 7##DQ895803|TRIM7|81786|tripartite motif containing 7##BC080553|TRIM7|81786|tripartite motif containing 7##BC011567|TRIM7|81786|tripartite motif containing 7##AK314872|TRIM7|81786|tripartite motif containing 7##AF396651|TRIM7|81786|tripartite motif containing 7##BC132863|TRIM7|81786|tripartite motif containing 7##BC132867|TRIM7|81786|tripartite motif containing 7##NM_033342|TRIM7|81786|tripartite motif containing 7##NM_203293|TRIM7|81786|tripartite motif containing 7##AF220032|TRIM7|81786|tripartite motif containing 7	0.986977	CTCF.p2:1:0.987
chr6	108169560	108169693	reg1004252.p1	13.907	+	AK303562 AK074125 TSC_hg19_v1_chr6_-_108145518 AK093571 AX748208 NM_198081	-24110	-	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	-358198	+	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	-388896	-	AF100141 CU690382 CU690568 BC001153 TSC_hg19_v1_chr6_-_108279282 AK074835	109631	-	TSC_hg19_v1_chr6_-_108279316 AJ011779	109686	-	TSC_hg19_v1_chr6_-_108279346 BC048287 AK001465 BC047221	109707	-	AK303562|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK074125|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK093571|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_198081|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)##AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC048287|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK001465|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC047221|SEC63|11231|SEC63 homolog (S. cerevisiae)	0.999793	CTCF.p2:-12:1.000
chr1	202569388	202569508	reg1004692.p1	13.904	+	AB588820 NM_001197131 TSC_hg19_v1_chr1_+_202509319	-60168	+	AB050641 AB050642 NM_032103 NM_032104	-137578	+	TSC_hg19_v1_chr1_+_202317826 AK307591 NM_001167857 NM_001167858 NM_002481 AB003062 AF324888 BC144699 BC110907 BC034430 BC071166	-251575	+	AK094430 NM_001136504	43132	-	BC100814 BC100815 BC100816 BC100817 AK090672 NM_177402 TSC_hg19_v1_chr1_-_202679575	110051	-	TSC_hg19_v1_chr1_-_202776401 AK122752	206996	-	AB588820|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001197131|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050641|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050642|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032103|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032104|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AK307591|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167857|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167858|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_002481|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB003062|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AF324888|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC144699|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC110907|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC034430|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC071166|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AK094430|SYT2|127833|synaptotagmin II##NM_001136504|SYT2|127833|synaptotagmin II##BC100814|SYT2|127833|synaptotagmin II##BC100815|SYT2|127833|synaptotagmin II##BC100816|SYT2|127833|synaptotagmin II##BC100817|SYT2|127833|synaptotagmin II##AK090672|SYT2|127833|synaptotagmin II##NM_177402|SYT2|127833|synaptotagmin II##AK122752|KDM5B|10765|lysine (K)-specific demethylase 5B	0.29503	CTCF.p2:9:0.295
chr8	23153774	23153881	reg1003617.p2	13.904	+	TSC_hg19_v1_chr8_+_23145630 AL050297 BC032421	-8149	+	TSC_hg19_v1_chr8_+_23145620 NM_001136108 AK293465	-8230	+	TSC_hg19_v1_chr8_+_23104153 AK092500 AX747573 AL833843 BC019110 AK296592 CU676386 BC004344	-49585	+	AK098436 TSC_hg19_v1_chr8_-_23177535	23681	-	BC000594 TSC_hg19_v1_chr8_-_23261609	107774	-	TSC_hg19_v1_chr8_-_23261631 U89942	107801	-	AL050297|R3HCC1|203069|R3H domain and coiled-coil containing 1##BC032421|R3HCC1|203069|R3H domain and coiled-coil containing 1##NM_001136108|R3HCC1|203069|R3H domain and coiled-coil containing 1##AK293465|R3HCC1|203069|R3H domain and coiled-coil containing 1##AK092500|CHMP7|91782|charged multivesicular body protein 7##AL833843|CHMP7|91782|charged multivesicular body protein 7##BC019110|CHMP7|91782|charged multivesicular body protein 7##AK296592|CHMP7|91782|charged multivesicular body protein 7##BC004344|CHMP7|91782|charged multivesicular body protein 7##AK098436|LOXL2|4017|lysyl oxidase-like 2##BC000594|LOXL2|4017|lysyl oxidase-like 2##U89942|LOXL2|4017|lysyl oxidase-like 2	0.482358	CTCF.p2:-2:0.448
chr19	50486994	50487127	reg1004830.p1	13.903	+	AK301031 BC030222 TSC_hg19_v1_chr19_+_50472920 BC039008 EU330985	-14159	+	AY358135 AB072038 TSC_hg19_v1_chr19_-_50464341 AF337818 NM_001135163 NM_052884	-22693	-	TSC_hg19_v1_chr19_-_50433002 NM_016553	-54057	-	AB031052 BC023556 TSC_hg19_v1_chr19_-_50528626 AK292918 AK294802 AK311220 AK303529	41541	-	TSC_hg19_v1_chr19_-_50528630 AK225154 AF514788 BC095449 BC003546 AK303010	41582	-	TSC_hg19_v1_chr19_-_50528683 NM_001025778 NM_016440	41683	-	BC030222|SIGLEC16|400709|sialic acid binding Ig-like lectin 16 (gene/pseudogene)##BC039008|SIGLEC16|400709|sialic acid binding Ig-like lectin 16 (gene/pseudogene)##AY358135|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##AB072038|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##AF337818|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##NM_001135163|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##NM_052884|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##NM_016553|NUP62|23636|nucleoporin 62kDa##AB031052|VRK3|51231|vaccinia related kinase 3##BC023556|VRK3|51231|vaccinia related kinase 3##AK292918|VRK3|51231|vaccinia related kinase 3##AK294802|VRK3|51231|vaccinia related kinase 3##AK311220|VRK3|51231|vaccinia related kinase 3##AK303529|VRK3|51231|vaccinia related kinase 3##AK225154|VRK3|51231|vaccinia related kinase 3##AF514788|VRK3|51231|vaccinia related kinase 3##BC095449|VRK3|51231|vaccinia related kinase 3##BC003546|VRK3|51231|vaccinia related kinase 3##AK303010|VRK3|51231|vaccinia related kinase 3##NM_001025778|VRK3|51231|vaccinia related kinase 3##NM_016440|VRK3|51231|vaccinia related kinase 3	0.9827	CTCF.p2:15:0.983
chr3	5099593	5099711	reg1002604.p2	13.903	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-78298	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	-78471	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	-78536	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	64303	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	64439	+	TSC_hg19_v1_chr3_+_5229344 AK298511	129675	+	AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	0.67943	CTCF.p2:10:0.679
chr14	22568599	22568741	reg1004699.p1	13.902	+	AB463964 NM_001001912 AY726598	-435348	+	NM_001005466 AB529274 BC137371 BC137382	-465624	-	AB528817 NM_001005465	-529796	-	X58763 TSC_hg19_v1_chr14_+_22989364	420679	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	489416	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	489464	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	1.882693	CTCF.p2:-13:0.992	CTCF.p2:40:0.891
chr3	106328676	106328792	reg1002913.p2	13.902	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-740927	-	CR749655 TSC_hg19_v1_chr3_-_105421064	-907680	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-1242912	+	TSC_hg19_v1_chr3_-_106959482 BC036229	630745	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	630858	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	767576	+	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54	0.988352	CTCF.p2:12:0.988
chr11	36328571	36328700	reg1004135.p1	13.901	+	NM_001160167 AK055042	-10855	+	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	-17649	-	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	-17682	-	NM_001160168 NM_024841 BX640959 AK024275	68925	+	NM_001160169	93911	+	TSC_hg19_v1_chr11_-_36531820 U78798 BC031052 AK292978 NM_004620 NM_145803	203179	-	NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##NM_001160168|PRR5L|79899|proline rich 5 like##NM_024841|PRR5L|79899|proline rich 5 like##BX640959|PRR5L|79899|proline rich 5 like##AK024275|PRR5L|79899|proline rich 5 like##NM_001160169|PRR5L|79899|proline rich 5 like##U78798|TRAF6|7189|TNF receptor-associated factor 6##BC031052|TRAF6|7189|TNF receptor-associated factor 6##AK292978|TRAF6|7189|TNF receptor-associated factor 6##NM_004620|TRAF6|7189|TNF receptor-associated factor 6##NM_145803|TRAF6|7189|TNF receptor-associated factor 6	0.010778	
chr5	80802904	80803036	reg1004418.p1	13.901	+	BC075011 BC075010 AK122960 AB078619 BC089437 NM_130767 TSC_hg19_v1_chr5_-_80690052	-112968	-	NM_001131035 NM_001131036 NM_032280 AL512712 TSC_hg19_v1_chr5_+_80597439 BC032736 AK314160 BC022799 BC014841	-205531	+	AK092460 TSC_hg19_v1_chr5_-_80597373 AK096680	-205598	-	TSC_hg19_v1_chr5_-_81046929 AB528651 CU677799 DQ891620 DQ894812 EU176592 EU831646 EU831730 AK293544 AK074537 AK294864 AK297494 AF161465 AF077048 AK299858 AK312337 CR936787 AL080076 BC017020	243929	-	TSC_hg19_v1_chr5_-_81046990 NM_012446	244138	-	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	464875	+	BC075011|ACOT12|134526|acyl-CoA thioesterase 12##BC075010|ACOT12|134526|acyl-CoA thioesterase 12##AK122960|ACOT12|134526|acyl-CoA thioesterase 12##AB078619|ACOT12|134526|acyl-CoA thioesterase 12##BC089437|ACOT12|134526|acyl-CoA thioesterase 12##NM_130767|ACOT12|134526|acyl-CoA thioesterase 12##NM_001131035|ZCCHC9|84240|zinc finger, CCHC domain containing 9##NM_001131036|ZCCHC9|84240|zinc finger, CCHC domain containing 9##NM_032280|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AL512712|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC032736|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AK314160|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC022799|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC014841|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AK092460|LOC100131067|100131067|uncharacterized LOC100131067##AK096680|LOC100131067|100131067|uncharacterized LOC100131067##DQ891620|SSBP2|23635|single-stranded DNA binding protein 2##DQ894812|SSBP2|23635|single-stranded DNA binding protein 2##EU176592|SSBP2|23635|single-stranded DNA binding protein 2##EU831646|SSBP2|23635|single-stranded DNA binding protein 2##EU831730|SSBP2|23635|single-stranded DNA binding protein 2##AK293544|SSBP2|23635|single-stranded DNA binding protein 2##AK074537|SSBP2|23635|single-stranded DNA binding protein 2##AK294864|SSBP2|23635|single-stranded DNA binding protein 2##AK297494|SSBP2|23635|single-stranded DNA binding protein 2##AF161465|SSBP2|23635|single-stranded DNA binding protein 2##AF077048|SSBP2|23635|single-stranded DNA binding protein 2##AK299858|SSBP2|23635|single-stranded DNA binding protein 2##AK312337|SSBP2|23635|single-stranded DNA binding protein 2##CR936787|SSBP2|23635|single-stranded DNA binding protein 2##AL080076|SSBP2|23635|single-stranded DNA binding protein 2##BC017020|SSBP2|23635|single-stranded DNA binding protein 2##NM_012446|SSBP2|23635|single-stranded DNA binding protein 2##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)	0.965029	CTCF.p2:8:0.965
chr1	204733049	204733180	reg1004241.p1	13.899	+	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	-78523	-	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	-247504	+	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	-247612	+	TSC_hg19_v1_chr1_+_204797779 BC040674 NM_001005388 NM_001005389 NM_001160332 NM_001160333 NM_015090 AK295291 AK299262 AK090639 AX746553	64698	+	TSC_hg19_v1_chr1_+_204839989 AK308686	106869	+	NM_001160331 BC137013 BC144454 BC144455 AB384522	180284	+	AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2##AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC040674|NFASC|23114|neurofascin##NM_001005388|NFASC|23114|neurofascin##NM_001005389|NFASC|23114|neurofascin##NM_001160332|NFASC|23114|neurofascin##NM_001160333|NFASC|23114|neurofascin##NM_015090|NFASC|23114|neurofascin##AK295291|NFASC|23114|neurofascin##AK299262|NFASC|23114|neurofascin##AK090639|NFASC|23114|neurofascin##AK308686|NFASC|23114|neurofascin##NM_001160331|NFASC|23114|neurofascin##BC137013|NFASC|23114|neurofascin##BC144454|NFASC|23114|neurofascin##BC144455|NFASC|23114|neurofascin	0.623608	CTCF.p2:15:0.624
chr22	33698148	33698259	reg1002773.p1	13.899	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-243848	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-295477	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-500451	+	AJ007583 AB011181 NM_004737 NM_133642	618167	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1763946	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1955273	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.98001	CTCF.p2:-15:0.980
chr8	80935939	80936069	reg1004398.p1	13.899	+	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	-256007	-	AK292737 TSC_hg19_v1_chr8_+_80523376 BC006302 S82024 AB528346 BT020034 CR456833 DQ892719 DQ895968 CU675343	-412601	+	TSC_hg19_v1_chr8_+_80523354 AK297594 AK308557 AK297485	-412645	+	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	6498	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	57025	-	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	147766	-	AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK292737|STMN2|11075|stathmin-like 2##BC006302|STMN2|11075|stathmin-like 2##S82024|STMN2|11075|stathmin-like 2##BT020034|STMN2|11075|stathmin-like 2##CR456833|STMN2|11075|stathmin-like 2##DQ892719|STMN2|11075|stathmin-like 2##DQ895968|STMN2|11075|stathmin-like 2##AK297594|STMN2|11075|stathmin-like 2##AK308557|STMN2|11075|stathmin-like 2##AK297485|STMN2|11075|stathmin-like 2##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52	1.322926	CTCF.p2:20:0.997	CTCF.p2:-34:0.326
chr1	161179734	161179867	reg1002595.p2	13.897	+	BC001456 TSC_hg19_v1_chr1_+_161172183 DQ894087	-7621	+	AK314807 TSC_hg19_v1_chr1_+_161172170 BC000170 AF013160 AF050640 AK222618 AK309871	-7632	+	TSC_hg19_v1_chr1_+_161172161 AK301641 AK315977	-7657	+	AK307102 TSC_hg19_v1_chr1_+_161185076	5271	+	TSC_hg19_v1_chr1_+_161185087 M33195 NM_004106 BC033872 AB590329 DQ890782 EU176502	5297	+	BT006786 AB590164 DQ892493 DQ895705 AB106565 M29882 X00955 TSC_hg19_v1_chr1_-_161193333	13463	-	BC001456|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##DQ894087|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AK314807|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##BC000170|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AF013160|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AF050640|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AK222618|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AK309871|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AK301641|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AK315977|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AK307102|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##M33195|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##NM_004106|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##BC033872|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##DQ890782|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##EU176502|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##BT006786|APOA2|336|apolipoprotein A-II##DQ892493|APOA2|336|apolipoprotein A-II##DQ895705|APOA2|336|apolipoprotein A-II##AB106565|APOA2|336|apolipoprotein A-II##M29882|APOA2|336|apolipoprotein A-II##X00955|APOA2|336|apolipoprotein A-II	0.994173	CTCF.p2:-17:0.994
chr2	197141871	197142002	reg1004811.p1	13.897	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-105618	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-105657	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-208441	-	BC117194 BC117198 AB037722 NM_020760	315356	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	362421	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	522477	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.0	
chr7	75272317	75272442	reg1004622.p1	13.897	+	BC101598 BC143635 BC087844 BC022886 BC007683 BC014421 BC029646 TSC_hg19_v1_chr7_-_75157432 BC046153	-115194	-	NM_001099435	-148081	+	TSC_hg19_v1_chr7_-_75115568 BC082993 NM_001099415	-156810	-	AF365404 AB385224 TSC_hg19_v1_chr7_-_75368255 AK094866 AK304738 BC110545	95861	-	TSC_hg19_v1_chr7_-_75368305 AF486833 NM_001243198 NM_005338	95931	-	NM_006072 AY358893	146759	-	BC101598|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC143635|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC087844|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC007683|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC014421|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC046153|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##NM_001099435|SPDYE5|442590|speedy homolog E5 (Xenopus laevis)##BC082993|POM121C|100101267|POM121 membrane glycoprotein C##NM_001099415|POM121C|100101267|POM121 membrane glycoprotein C##AF365404|HIP1|3092|huntingtin interacting protein 1##AK094866|HIP1|3092|huntingtin interacting protein 1##AK304738|HIP1|3092|huntingtin interacting protein 1##BC110545|HIP1|3092|huntingtin interacting protein 1##AF486833|HIP1|3092|huntingtin interacting protein 1##NM_001243198|HIP1|3092|huntingtin interacting protein 1##NM_005338|HIP1|3092|huntingtin interacting protein 1##NM_006072|CCL26|10344|chemokine (C-C motif) ligand 26##AY358893|CCL26|10344|chemokine (C-C motif) ligand 26	0.919468	CTCF.p2:12:0.919
chr13	28898470	28898598	reg1003217.p2	13.896	+	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	-185868	+	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	-223847	-	NM_001105577	-335761	-	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	170710	-	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	334674	+	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	334760	+	AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##NM_001105577|PRHOXNB|646625|parahox cluster neighbor##BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein	0.992046	CTCF.p2:-6:0.992
chr16	8617801	8617915	reg1002278.p1	13.895	+	AF094849 AF109106 AF229057 NM_145891 NM_145892 NM_145893	-1235108	+	AK001027 NM_001142334	-1794049	+	TSC_hg19_v1_chr16_+_6533765 BC033885	-2084083	+	TSC_hg19_v1_chr16_+_8715563 NM_024109 AK315383 BC001908 AK022495	97682	+	TSC_hg19_v1_chr16_+_8768473 NM_020686 BX537362 AK096146 BC031413 BC015628	150604	+	NM_000663 TSC_hg19_v1_chr16_+_8806841 BC013965	188977	+	AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_024109|METTL22|79091|methyltransferase like 22##AK315383|METTL22|79091|methyltransferase like 22##BC001908|METTL22|79091|methyltransferase like 22##AK022495|METTL22|79091|methyltransferase like 22##NM_020686|ABAT|18|4-aminobutyrate aminotransferase##BX537362|ABAT|18|4-aminobutyrate aminotransferase##AK096146|ABAT|18|4-aminobutyrate aminotransferase##BC031413|ABAT|18|4-aminobutyrate aminotransferase##BC015628|ABAT|18|4-aminobutyrate aminotransferase##NM_000663|ABAT|18|4-aminobutyrate aminotransferase##BC013965|ABAT|18|4-aminobutyrate aminotransferase	0.996907	CTCF.p2:-37:0.997
chr14	102094867	102095001	reg1004406.p1	13.893	+	BX161470 NM_001362 S79854 TSC_hg19_v1_chr14_+_102027831 AK292310 BC017717	-67171	+	BC150617 NM_001134888	-743751	-	AK092707 TSC_hg19_v1_chr14_+_101300861	-794099	+	NM_001161725 NM_001161726 TSC_hg19_v1_chr14_+_102228166 AL834350 BC051442 AK131391 AK302470	133252	+	TSC_hg19_v1_chr14_+_102276171 NM_002719 NM_178586 NM_178587 AK295449 AK315072 Z69030 U37352 BC016183	181249	+	AB451341 CU677587 D26445 AB463199 L42375 TSC_hg19_v1_chr14_+_102276338	181375	+	BX161470|DIO3|1735|deiodinase, iodothyronine, type III##NM_001362|DIO3|1735|deiodinase, iodothyronine, type III##S79854|DIO3|1735|deiodinase, iodothyronine, type III##BC017717|DIO3|1735|deiodinase, iodothyronine, type III##BC150617|RTL1|388015|retrotransposon-like 1##NM_001134888|RTL1|388015|retrotransposon-like 1##AK092707|MEG3|55384|maternally expressed 3 (non-protein coding)##NM_001161725|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_001161726|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AL834350|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC051442|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK131391|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK302470|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_002719|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178586|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178587|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK315072|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##Z69030|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##U37352|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC016183|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AB451341|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##D26445|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##L42375|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	0.993539	CTCF.p2:15:0.994
chr3	134027344	134027461	reg1003002.p2	13.893	+	TSC_hg19_v1_chr3_-_133969650 NM_001005861 NM_002958 X69970 X96588	-57776	-	TSC_hg19_v1_chr3_-_133969397 AB527382	-57938	-	BC051347 TSC_hg19_v1_chr3_-_133748836 NM_005630	-278529	-	TSC_hg19_v1_chr3_-_134093290 AK223598 AK001343 AB023206 AK291616 NM_016201	65963	-	AK290761 TSC_hg19_v1_chr3_-_134204548	177128	-	TSC_hg19_v1_chr3_+_134204601 NM_001042383 NM_001042384 BC014050 AK023738	177192	+	NM_001005861|RYK|6259|RYK receptor-like tyrosine kinase##NM_002958|RYK|6259|RYK receptor-like tyrosine kinase##X69970|RYK|6259|RYK receptor-like tyrosine kinase##X96588|RYK|6259|RYK receptor-like tyrosine kinase##BC051347|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##NM_005630|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK223598|AMOTL2|51421|angiomotin like 2##AK001343|AMOTL2|51421|angiomotin like 2##AB023206|AMOTL2|51421|angiomotin like 2##AK291616|AMOTL2|51421|angiomotin like 2##NM_016201|AMOTL2|51421|angiomotin like 2##AK290761|ANAPC13|25847|anaphase promoting complex subunit 13##NM_001042383|CEP63|80254|centrosomal protein 63kDa##NM_001042384|CEP63|80254|centrosomal protein 63kDa##BC014050|CEP63|80254|centrosomal protein 63kDa##AK023738|CEP63|80254|centrosomal protein 63kDa	0.883642	CTCF.p2:-2:0.884
chr9	89951912	89952062	reg1003623.p2	13.892	+	AK127445 NM_001001709 BC132741 BC136791 HQ258059	-188386	+	L13698 NM_002048	-389884	-	TSC_hg19_v1_chr9_-_88969326 AL832193 CR936608 AK055546 CR933644 AL832026 BX641077 CR933643 BC111003 NM_001185059 NM_001185074 NM_024617	-982614	-	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	160599	+	TSC_hg19_v1_chr9_+_90112781 NM_004938 X76104 BC003614 AK295119	160881	+	NM_001912 NM_145918 TSC_hg19_v1_chr9_+_90341001	389006	+	AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##L13698|GAS1|2619|growth arrest-specific 1##NM_002048|GAS1|2619|growth arrest-specific 1##AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1##NM_004938|DAPK1|1612|death-associated protein kinase 1##X76104|DAPK1|1612|death-associated protein kinase 1##AK295119|DAPK1|1612|death-associated protein kinase 1##NM_001912|CTSL1|1514|cathepsin L1##NM_145918|CTSL1|1514|cathepsin L1	0.917807	CTCF.p2:-36:0.918
chr16	78269220	78269323	reg1003647.p1	13.891	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-135816	+	NM_001244755	-206286	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	-212821	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	1365344	-	AF125108 NM_130897 BC054892 BC035232	2305617	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	2568776	-	NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2	0.676358	CTCF.p2:11:0.676
chr7	86941726	86941838	reg1003367.p1	13.891	+	BT006973 TSC_hg19_v1_chr7_-_86849049 BC002837 NM_024315 AK313794	-92841	-	NM_021145 TSC_hg19_v1_chr7_+_86781946 BC070064	-159845	+	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	-160069	+	BT009845 CR542141 BC061927 TSC_hg19_v1_chr7_-_86974833 BC103631 AB007457 AB007458 BC002709 AK292782 AB007455 AB007456 BC068535	32990	-	TSC_hg19_v1_chr7_+_86975006 NM_001143935 NM_001243745 NM_021151 AK127901 AK313487 BC051874 BC039004 BC012483 BC019226 AF073770 AF168793	33212	+	M23234 NM_000443 NM_018849 NM_018850 BC042531	163232	-	BT006973|C7orf23|79161|chromosome 7 open reading frame 23##BC002837|C7orf23|79161|chromosome 7 open reading frame 23##NM_024315|C7orf23|79161|chromosome 7 open reading frame 23##AK313794|C7orf23|79161|chromosome 7 open reading frame 23##NM_021145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BC070064|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BT009845|TP53TG1|11257|TP53 target 1 (non-protein coding)##CR542141|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC061927|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC103631|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007457|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007458|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC002709|TP53TG1|11257|TP53 target 1 (non-protein coding)##AK292782|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007455|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007456|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC068535|TP53TG1|11257|TP53 target 1 (non-protein coding)##NM_001143935|CROT|54677|carnitine O-octanoyltransferase##NM_001243745|CROT|54677|carnitine O-octanoyltransferase##NM_021151|CROT|54677|carnitine O-octanoyltransferase##AK127901|CROT|54677|carnitine O-octanoyltransferase##AK313487|CROT|54677|carnitine O-octanoyltransferase##BC051874|CROT|54677|carnitine O-octanoyltransferase##BC039004|CROT|54677|carnitine O-octanoyltransferase##BC012483|CROT|54677|carnitine O-octanoyltransferase##BC019226|CROT|54677|carnitine O-octanoyltransferase##AF073770|CROT|54677|carnitine O-octanoyltransferase##AF168793|CROT|54677|carnitine O-octanoyltransferase##M23234|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_000443|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018849|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018850|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##BC042531|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4	0.783072	CTCF.p2:-6:0.783
chrX	129326350	129326486	reg1005473.p1	13.890	+	TSC_hg19_v1_chrX_+_129305943 BC001157 BC001704 BC009996 NM_004794 AF498959 BT007038 AK094927	-20569	+	BC111065 TSC_hg19_v1_chrX_-_129299819 NM_001130847 NM_004208 NM_145812 NM_145813	-26587	-	TSC_hg19_v1_chrX_-_129299743 AK000775 AL049703 BC139738	-26696	-	TSC_hg19_v1_chrX_-_129402874 AK000102 AL834333 AL133204 AK290373 BC051728 NM_017666	76428	-	TSC_hg19_v1_chrX_+_129473927 AK304649 AK297499 AK309433 AK296155 NM_003951 NM_022810 BC119666 BC119667 AF155809 AF155810 AF155811 AY358099	147614	+	AY288416 BC101166 BC101167 BC101168 AB529244 HQ258187 BC095502 BC126179 BC126181 NM_178471	193047	-	BC001157|RAB33A|9363|RAB33A, member RAS oncogene family##BC001704|RAB33A|9363|RAB33A, member RAS oncogene family##BC009996|RAB33A|9363|RAB33A, member RAS oncogene family##NM_004794|RAB33A|9363|RAB33A, member RAS oncogene family##AF498959|RAB33A|9363|RAB33A, member RAS oncogene family##BT007038|RAB33A|9363|RAB33A, member RAS oncogene family##AK094927|RAB33A|9363|RAB33A, member RAS oncogene family##BC111065|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_001130847|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_004208|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_145812|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_145813|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AK000775|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AL049703|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##BC139738|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AK000102|ZNF280C|55609|zinc finger protein 280C##AL834333|ZNF280C|55609|zinc finger protein 280C##AL133204|ZNF280C|55609|zinc finger protein 280C##AK290373|ZNF280C|55609|zinc finger protein 280C##BC051728|ZNF280C|55609|zinc finger protein 280C##NM_017666|ZNF280C|55609|zinc finger protein 280C##AK297499|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AK309433|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AK296155|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##NM_003951|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##NM_022810|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##BC119666|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##BC119667|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155809|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155810|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155811|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AY358099|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AY288416|GPR119|139760|G protein-coupled receptor 119##BC101166|GPR119|139760|G protein-coupled receptor 119##BC101167|GPR119|139760|G protein-coupled receptor 119##BC101168|GPR119|139760|G protein-coupled receptor 119##HQ258187|GPR119|139760|G protein-coupled receptor 119##BC095502|GPR119|139760|G protein-coupled receptor 119##BC126179|GPR119|139760|G protein-coupled receptor 119##BC126181|GPR119|139760|G protein-coupled receptor 119##NM_178471|GPR119|139760|G protein-coupled receptor 119	0.789016	CTCF.p2:11:0.789
chr11	36500379	36500501	reg1004571.p1	13.889	+	NM_001160169	-77894	+	NM_001160168 NM_024841 BX640959 AK024275	-102880	+	NM_001160167 AK055042	-182660	+	TSC_hg19_v1_chr11_-_36531820 U78798 BC031052 AK292978 NM_004620 NM_145803	31374	-	NM_000448 M29474	89128	+	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	115664	+	NM_001160169|PRR5L|79899|proline rich 5 like##NM_001160168|PRR5L|79899|proline rich 5 like##NM_024841|PRR5L|79899|proline rich 5 like##BX640959|PRR5L|79899|proline rich 5 like##AK024275|PRR5L|79899|proline rich 5 like##NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like##U78798|TRAF6|7189|TNF receptor-associated factor 6##BC031052|TRAF6|7189|TNF receptor-associated factor 6##AK292978|TRAF6|7189|TNF receptor-associated factor 6##NM_004620|TRAF6|7189|TNF receptor-associated factor 6##NM_145803|TRAF6|7189|TNF receptor-associated factor 6##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74	0.799275	CTCF.p2:16:0.799
chr13	52389369	52389500	reg1003242.p1	13.888	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	-11159	-	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-230699	+	TSC_hg19_v1_chr13_+_52158639 BC014004	-230793	+	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	46760	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	196116	-	TSC_hg19_v1_chr13_+_52586546 NM_001004127 BC142998 AK296747 AK092428 AX747540 BC108677 BC111022 AK025456 BC143059 BC150316	197101	+	BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##BC014004|WDFY2|115825|WD repeat and FYVE domain containing 2##AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	0.998526	CTCF.p2:0:0.999
chr5	59105918	59106062	reg1003410.p2	13.888	+	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	-41535	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	-41642	-	U50159 NM_006203 L20970	-223691	-	NM_001104631	83630	-	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	677914	-	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	678050	+	NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)	0.998807	CTCF.p2:-20:0.999
chr17	32965415	32965482	reg1006599.p2	13.887	+	NM_207313	-57681	+	BC133004 BC136710 BC142651 AK126768 NM_207454	-59096	-	AB528767 BC105073 BC105075 M57502 AK312183 NM_002981	-275233	-	CU693272 AK301773 TSC_hg19_v1_chr17_-_33288425 AK225729 BC026125 AK225728 D78333	322987	-	TSC_hg19_v1_chr17_-_33288480 AK302344 BC027591 NM_001193529 NM_001193530 NM_006584	323054	-	TSC_hg19_v1_chr17_+_33288558 AK315671 NM_052857 AK055707 AB590460 BC002913 BC011584 DQ892326 DQ895528	323141	+	NM_207313|TMEM132E|124842|transmembrane protein 132E##BC133004|C17orf102|400591|chromosome 17 open reading frame 102##BC136710|C17orf102|400591|chromosome 17 open reading frame 102##BC142651|C17orf102|400591|chromosome 17 open reading frame 102##AK126768|C17orf102|400591|chromosome 17 open reading frame 102##NM_207454|C17orf102|400591|chromosome 17 open reading frame 102##BC105073|CCL1|6346|chemokine (C-C motif) ligand 1##BC105075|CCL1|6346|chemokine (C-C motif) ligand 1##M57502|CCL1|6346|chemokine (C-C motif) ligand 1##AK312183|CCL1|6346|chemokine (C-C motif) ligand 1##NM_002981|CCL1|6346|chemokine (C-C motif) ligand 1##AK301773|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225729|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC026125|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225728|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##D78333|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK302344|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC027591|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193529|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193530|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_006584|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK315671|ZNF830|91603|zinc finger protein 830##NM_052857|ZNF830|91603|zinc finger protein 830##AK055707|ZNF830|91603|zinc finger protein 830##BC002913|ZNF830|91603|zinc finger protein 830##BC011584|ZNF830|91603|zinc finger protein 830##DQ892326|ZNF830|91603|zinc finger protein 830##DQ895528|ZNF830|91603|zinc finger protein 830	0.984559	CTCF.p2:6:0.985
chr7	155531472	155531610	reg1003721.p2	13.887	+	TSC_hg19_v1_chr7_+_155437354 AK307515	-94173	+	TSC_hg19_v1_chr7_+_155437182 NM_053043	-94333	+	TSC_hg19_v1_chr7_+_155437147 BC011923	-94390	+	AY927450 AY927452 AY927453 AY927454 AY927455 TSC_hg19_v1_chr7_-_155601833	70257	-	AB464234 TSC_hg19_v1_chr7_-_155604951 L38518 NM_000193	73349	-	AF063598 TSC_hg19_v1_chr7_-_156433234 BC050364 BC058889 BC031037 BC070228 AK056371 AF439977	901690	-	AK307515|RBM33|155435|RNA binding motif protein 33##NM_053043|RBM33|155435|RNA binding motif protein 33##BC011923|RBM33|155435|RNA binding motif protein 33##AY927450|SHH|6469|sonic hedgehog##L38518|SHH|6469|sonic hedgehog##NM_000193|SHH|6469|sonic hedgehog##AF063598|C7orf13|129790|chromosome 7 open reading frame 13##BC050364|C7orf13|129790|chromosome 7 open reading frame 13##BC031037|C7orf13|129790|chromosome 7 open reading frame 13##BC070228|C7orf13|129790|chromosome 7 open reading frame 13##AK056371|C7orf13|129790|chromosome 7 open reading frame 13##AF439977|C7orf13|129790|chromosome 7 open reading frame 13	0.923372	CTCF.p2:0:0.923
chr7	31162339	31162466	reg1004801.p1	13.887	+	TSC_hg19_v1_chr7_+_31092073 NM_001118 NM_001199635 NM_001199636 NM_001199637 AK290046 AK226138	-70298	+	L01406 L09237 NM_000823 AY557192	-158743	+	AK309608 NM_001185060 AK309691 AK309688 NM_001185061 NM_001185062	-201386	+	AK055238 AF248954 NM_022728	218120	-	AK128026 NM_194300	394575	+	NM_001145123 NM_006658	564228	+	NM_001118|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199635|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199636|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199637|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK290046|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK226138|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##L01406|GHRHR|2692|growth hormone releasing hormone receptor##L09237|GHRHR|2692|growth hormone releasing hormone receptor##NM_000823|GHRHR|2692|growth hormone releasing hormone receptor##AY557192|GHRHR|2692|growth hormone releasing hormone receptor##AK309608|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185060|AQP1|358|aquaporin 1 (Colton blood group)##AK309691|AQP1|358|aquaporin 1 (Colton blood group)##AK309688|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185061|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185062|AQP1|358|aquaporin 1 (Colton blood group)##AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129##NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17	0.999249	CTCF.p2:-1:0.999
chr11	57568256	57568398	reg1005272.p1	13.886	+	NM_001085458 NM_001085459 NM_001085460 NM_001085461 NM_001085462 NM_001085463 NM_001085464 NM_001085465 NM_001085466 NM_001085467 NM_001085468 NM_001085469 NM_001206883 NM_001206884 NM_001206885 NM_001206886 NM_001206887 NM_001206888 NM_001206889 NM_001206890 NM_001206891 NM_001331 TSC_hg19_v1_chr11_+_57529331 AF062317 AF062318 AF062319 AF062320 AF062321 AF062322 AF062323 AF062324 AF062325 AF062326 AF062327 AF062328 AF062329 AF062330 AF062331 AF062332 AF062333 AF062334 AF062335 AF062336 AF062337 AF062338 AF062339 AF062340 AF062341 AF062342 AF062343 AF062344 BC075795	-38988	+	NM_001145101	-49075	-	TSC_hg19_v1_chr11_+_57508992 BC021122	-59327	+	BC110819 NM_001005212	223025	+	BC151146 BC151147 NM_001005186	230085	+	NM_001005211	318588	-	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206883|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206884|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206885|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206886|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206887|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206888|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206889|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206890|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206891|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1##BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001145101|BTBD18|643376|BTB (POZ) domain containing 18##BC021122|C11orf31|280636|chromosome 11 open reading frame 31##BC110819|OR9Q1|219956|olfactory receptor, family 9, subfamily Q, member 1##NM_001005212|OR9Q1|219956|olfactory receptor, family 9, subfamily Q, member 1##BC151146|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##BC151147|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##NM_001005186|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##NM_001005211|OR9I1|219954|olfactory receptor, family 9, subfamily I, member 1	0.098811	
chr3	195980589	195980706	reg1003482.p1	13.886	+	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	-37253	+	BC034801 BC022078 NM_001039617 AK122907	-42366	-	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-171631	-	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	33888	-	BC046355 NM_005017 TSC_hg19_v1_chr3_-_196014591 AK304534 AK309073	33971	-	TSC_hg19_v1_chr3_-_196045112 BC015348 BC021177 NM_152773	64466	-	AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##BC046355|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##NM_005017|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK304534|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309073|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##BC015348|TCTEX1D2|255758|Tctex1 domain containing 2##BC021177|TCTEX1D2|255758|Tctex1 domain containing 2##NM_152773|TCTEX1D2|255758|Tctex1 domain containing 2	0.970719	CTCF.p2:0:0.971
chr6	56767832	56767933	reg1003057.p1	13.886	+	AK299898 TSC_hg19_v1_chr6_-_56716715	-51168	-	AK294830 TSC_hg19_v1_chr6_-_56716493	-51430	-	TSC_hg19_v1_chr6_-_56708446 U31850	-59410	-	TSC_hg19_v1_chr6_+_56819725 NM_152731	51857	+	BC036119 TSC_hg19_v1_chr6_+_56819931 AK054724	52124	+	TSC_hg19_v1_chr6_+_56911328 BC041125 NM_020931	143464	+	AK299898|DST|667|dystonin##AK294830|DST|667|dystonin##U31850|DST|667|dystonin##NM_152731|BEND6|221336|BEN domain containing 6##BC036119|BEND6|221336|BEN domain containing 6##AK054724|BEND6|221336|BEN domain containing 6##BC041125|KIAA1586|57691|KIAA1586##NM_020931|KIAA1586|57691|KIAA1586	0.997599	CTCF.p2:-21:0.998
chr8	99370444	99370564	reg1004492.p1	13.881	+	BC132687 BC144055 TSC_hg19_v1_chr8_-_99306600 AK024017 NM_024759	-63905	-	BC011529 NM_015029	-240437	+	TSC_hg19_v1_chr8_+_99129543 NM_001145860 NM_001145861 X99302 AK291434	-240966	+	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	68842	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	467343	-	NM_001142462 NM_053001 TSC_hg19_v1_chr8_+_99956669 AK074518 AK291491 AK310994 BC016936 AY038073	586153	+	BC132687|NIPAL2|79815|NIPA-like domain containing 2##BC144055|NIPAL2|79815|NIPA-like domain containing 2##AK024017|NIPAL2|79815|NIPA-like domain containing 2##NM_024759|NIPAL2|79815|NIPA-like domain containing 2##BC011529|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015029|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001145860|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001145861|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##X99302|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##AK291434|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3##NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)##NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)##AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)##AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)##AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)##BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)##AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)	0.980648	CTCF.p2:-1:0.981
chr9	128320845	128320970	reg1004342.p1	13.881	+	TSC_hg19_v1_chr9_+_128024122 AK056493 NM_015635 AB040954 BC114937 BC114962	-296758	+	TSC_hg19_v1_chr9_+_128024104 BC110990	-296803	+	TSC_hg19_v1_chr9_+_128024097 AK296381	-296809	+	TSC_hg19_v1_chr9_-_128469297 M37191	148403	-	TSC_hg19_v1_chr9_-_128469466 AK290060	148560	-	AL833042 TSC_hg19_v1_chr9_-_128469485 AY633624 AY633625 AY633626 BC002326 BC003044	148572	-	AK056493|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##NM_015635|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AB040954|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114937|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114962|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC110990|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AK296381|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##M37191|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AK290060|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AL833042|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633624|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633625|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633626|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC002326|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC003044|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1	0.926784	CTCF.p2:-1:0.927
chr10	5915536	5915665	reg1003496.p1	13.879	+	TSC_hg19_v1_chr10_-_5855394 Y13286 AK297177 AK297554 AK312485 NM_001115156 NM_001494	-60165	-	BX648038 AB451295 AB451429 BT006868 CR457073 D13988 DQ890573 DQ893733 BC005145 TSC_hg19_v1_chr10_-_5855330 AK309360	-60334	-	TSC_hg19_v1_chr10_+_5772610 AB095927	-142928	+	TSC_hg19_v1_chr10_-_5931834 BC067892 NM_001009941 NM_001009943 NM_019046	16256	-	TSC_hg19_v1_chr10_+_5932205 AK095343	16599	+	TSC_hg19_v1_chr10_+_5932214 NM_178150	16611	+	Y13286|GDI2|2665|GDP dissociation inhibitor 2##AK297177|GDI2|2665|GDP dissociation inhibitor 2##AK297554|GDI2|2665|GDP dissociation inhibitor 2##AK312485|GDI2|2665|GDP dissociation inhibitor 2##NM_001115156|GDI2|2665|GDP dissociation inhibitor 2##NM_001494|GDI2|2665|GDP dissociation inhibitor 2##BX648038|GDI2|2665|GDP dissociation inhibitor 2##AB451295|GDI2|2665|GDP dissociation inhibitor 2##AB451429|GDI2|2665|GDP dissociation inhibitor 2##BT006868|GDI2|2665|GDP dissociation inhibitor 2##CR457073|GDI2|2665|GDP dissociation inhibitor 2##D13988|GDI2|2665|GDP dissociation inhibitor 2##DQ890573|GDI2|2665|GDP dissociation inhibitor 2##DQ893733|GDI2|2665|GDP dissociation inhibitor 2##BC005145|GDI2|2665|GDP dissociation inhibitor 2##AK309360|GDI2|2665|GDP dissociation inhibitor 2##AB095927|FAM208B|54906|family with sequence similarity 208, member B##BC067892|ANKRD16|54522|ankyrin repeat domain 16##NM_001009941|ANKRD16|54522|ankyrin repeat domain 16##NM_001009943|ANKRD16|54522|ankyrin repeat domain 16##NM_019046|ANKRD16|54522|ankyrin repeat domain 16##AK095343|FBXO18|84893|F-box protein, helicase, 18##NM_178150|FBXO18|84893|F-box protein, helicase, 18	0.996382	CTCF.p2:0:0.996
chr15	93064897	93065035	reg1004262.p1	13.879	+	AK057393 NM_153040	-50060	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	-127767	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-667399	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	133913	-	BC110328 TSC_hg19_v1_chr15_-_93277463	212423	-	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	378520	+	AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##BC110328|FAM174B|400451|family with sequence similarity 174, member B##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2	0.186461	
chr19	52741147	52741267	reg1003368.p1	13.879	+	TSC_hg19_v1_chr19_+_52693337 AB384756 CR450340 DQ892756 DQ896000	-47866	+	TSC_hg19_v1_chr19_+_52693329 AK293493	-47878	+	TSC_hg19_v1_chr19_+_52693304 AK290593 AK291932 AK091387 AK130000 AK293174 AX746952 BC026733 AK299012 AK303934 AK307743 BC001537	-47921	+	BX648899 NM_001010851 TSC_hg19_v1_chr19_+_52772839 BC136833 BC136834 AK024074	31627	+	TSC_hg19_v1_chr19_+_52772847 BX538183 EU832461 EU832543	31649	+	BC007056 BC054018 NM_144684 AK096559 AK096442 AK303271 AX721138 AL832560 BC065503 AY512662 BC018783	59230	+	CR450340|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##DQ892756|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##DQ896000|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK293493|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK290593|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK291932|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK091387|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK130000|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK293174|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##BC026733|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK299012|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK303934|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK307743|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##BC001537|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##BX648899|ZNF766|90321|zinc finger protein 766##NM_001010851|ZNF766|90321|zinc finger protein 766##BC136833|ZNF766|90321|zinc finger protein 766##BC136834|ZNF766|90321|zinc finger protein 766##AK024074|ZNF766|90321|zinc finger protein 766##BX538183|ZNF766|90321|zinc finger protein 766##EU832461|ZNF766|90321|zinc finger protein 766##EU832543|ZNF766|90321|zinc finger protein 766##BC007056|ZNF480|147657|zinc finger protein 480##BC054018|ZNF480|147657|zinc finger protein 480##NM_144684|ZNF480|147657|zinc finger protein 480##AK096559|ZNF480|147657|zinc finger protein 480##AK096442|ZNF480|147657|zinc finger protein 480##AK303271|ZNF480|147657|zinc finger protein 480##AL832560|ZNF480|147657|zinc finger protein 480##BC065503|ZNF480|147657|zinc finger protein 480##AY512662|ZNF480|147657|zinc finger protein 480##BC018783|ZNF480|147657|zinc finger protein 480	0.933699	CTCF.p2:16:0.934
chr19	46532264	46532402	reg1004775.p1	13.878	+	NM_005091	-5778	-	TSC_hg19_v1_chr19_+_46498724 GQ375050	-33606	+	NM_001080402	-33995	+	AY672114 NM_001002923	11940	-	HQ258051 BC130593 BC130597 AY358434 AY672113 NM_207393	95588	-	AY672112 NM_001002915	118705	+	NM_005091|PGLYRP1|8993|peptidoglycan recognition protein 1##GQ375050|CCDC61|729440|coiled-coil domain containing 61##NM_001080402|CCDC61|729440|coiled-coil domain containing 61##AY672114|IGFL4|444882|IGF-like family member 4##NM_001002923|IGFL4|444882|IGF-like family member 4##HQ258051|IGFL3|388555|IGF-like family member 3##BC130593|IGFL3|388555|IGF-like family member 3##BC130597|IGFL3|388555|IGF-like family member 3##AY358434|IGFL3|388555|IGF-like family member 3##AY672113|IGFL3|388555|IGF-like family member 3##NM_207393|IGFL3|388555|IGF-like family member 3##AY672112|IGFL2|147920|IGF-like family member 2##NM_001002915|IGFL2|147920|IGF-like family member 2	0.997709	CTCF.p2:-7:0.998
chr17	56665132	56665265	reg1004078.p1	13.877	+	AK097440 BC022189 NM_001038704	-43491	-	AK301914 AK302146 NM_001198713	-47020	-	BC018056 U88870 AK295527 AK315396 TSC_hg19_v1_chr17_-_56609427 AF176379 AK308957 NM_080415 NM_080416	-55780	-	AK308299 BC040526 AK125896 BC045647 AL834143 NM_001201457 NM_031272 NM_198393	104197	-	TSC_hg19_v1_chr17_+_56769933 BC107753	104737	+	TSC_hg19_v1_chr17_+_56769962 AF029669 AK290487 BC073161 NM_002876 NM_058216 BC064578 BC093930 BC101485 BC143259 BC000667 AF029670 AB528656 BT007339 AK129738 AK303363	104803	+	AK097440|C17orf47|284083|chromosome 17 open reading frame 47##BC022189|C17orf47|284083|chromosome 17 open reading frame 47##NM_001038704|C17orf47|284083|chromosome 17 open reading frame 47##AK301914|SEPT4|5414|septin 4##AK302146|SEPT4|5414|septin 4##NM_001198713|SEPT4|5414|septin 4##BC018056|SEPT4|5414|septin 4##U88870|SEPT4|5414|septin 4##AK295527|SEPT4|5414|septin 4##AK315396|SEPT4|5414|septin 4##AF176379|SEPT4|5414|septin 4##AK308957|SEPT4|5414|septin 4##NM_080415|SEPT4|5414|septin 4##NM_080416|SEPT4|5414|septin 4##AK308299|TEX14|56155|testis expressed 14##BC040526|TEX14|56155|testis expressed 14##AK125896|TEX14|56155|testis expressed 14##BC045647|TEX14|56155|testis expressed 14##AL834143|TEX14|56155|testis expressed 14##NM_001201457|TEX14|56155|testis expressed 14##NM_031272|TEX14|56155|testis expressed 14##NM_198393|TEX14|56155|testis expressed 14##BC107753|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	0.984227	CTCF.p2:-6:0.984
chr10	69972619	69972761	reg1005221.p1	13.876	+	NM_032578 TSC_hg19_v1_chr10_+_69869249 AK027343 BX647637 AL832002 AL834247 BC142609 BC144333 BC144334	-103352	+	TSC_hg19_v1_chr10_-_69835055 NM_015601 NM_022079	-137583	-	BC039600 TSC_hg19_v1_chr10_-_69835041 AK026808 AY221963 AY650032 AY650033 AY650034	-137664	-	BC032621 NM_145178 AB593108 AB593109	19171	-	AK312275 AB528615 TSC_hg19_v1_chr10_-_70066624 AK092826 AX747753	93924	-	NM_012207 NM_021644 AK223441 AK291547 TSC_hg19_v1_chr10_+_70091820 BC039824 AX810704 AK295316 AF132361	119132	+	NM_032578|MYPN|84665|myopalladin##AK027343|MYPN|84665|myopalladin##BX647637|MYPN|84665|myopalladin##AL832002|MYPN|84665|myopalladin##AL834247|MYPN|84665|myopalladin##BC142609|MYPN|84665|myopalladin##BC144333|MYPN|84665|myopalladin##BC144334|MYPN|84665|myopalladin##NM_015601|HERC4|26091|hect domain and RLD 4##NM_022079|HERC4|26091|hect domain and RLD 4##BC039600|HERC4|26091|hect domain and RLD 4##AK026808|HERC4|26091|hect domain and RLD 4##AY221963|HERC4|26091|hect domain and RLD 4##AY650032|HERC4|26091|hect domain and RLD 4##AY650033|HERC4|26091|hect domain and RLD 4##AY650034|HERC4|26091|hect domain and RLD 4##BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)##NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)##AB593108|ATOH7|220202|atonal homolog 7 (Drosophila)##AB593109|ATOH7|220202|atonal homolog 7 (Drosophila)##AK312275|PBLD|64081|phenazine biosynthesis-like protein domain containing##AK092826|PBLD|64081|phenazine biosynthesis-like protein domain containing##NM_012207|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##NM_021644|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK223441|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK291547|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##BC039824|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK295316|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AF132361|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)	0.258668	CTCF.p2:-10:0.259
chr11	94887778	94887897	reg1004072.p1	13.876	+	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-64825	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-87429	+	TSC_hg19_v1_chr11_+_94800329 BC057783 BC006181	-87493	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	76467	-	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	634814	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	634896	-	AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8##BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B	0.875298	CTCF.p2:-5:0.875
chr1	24243403	24243535	reg1003219.p2	13.876	+	BC069722 NM_001841 X74328 FJ357036	-3665	-	CU675950 TSC_hg19_v1_chr1_-_24194781 M29877 AB074175 AK092914 AK095443 AK095455 AK225468 AK301302 AK310143 AK314649 AX747804 BC017338 AK295535 NM_000147	-48660	-	TSC_hg19_v1_chr1_-_24151934 NM_000191 NM_001166059	-91521	-	NM_017761 TSC_hg19_v1_chr1_+_24286310	42836	+	TSC_hg19_v1_chr1_+_24286317 AF151042 AK300522 BC068475 AK311305 BC001959 BC085018 BC078177 AF374386	42877	+	TSC_hg19_v1_chr1_-_24306818 AF449427 CU674556 AB528881 AY150180 AY150181 AF047448 AF067730 AY007101 BC010074 BC005039 AK001286 AK001656 BC071575 AF419331	63314	-	BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)##NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)##X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)##M29877|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AB074175|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK092914|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095443|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095455|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK225468|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK301302|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK310143|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK314649|FUCA1|2517|fucosidase, alpha-L- 1, tissue##BC017338|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK295535|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000147|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000191|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_001166059|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF449427|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150180|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150181|SRSF10|10772|serine/arginine-rich splicing factor 10##AF047448|SRSF10|10772|serine/arginine-rich splicing factor 10##AF067730|SRSF10|10772|serine/arginine-rich splicing factor 10##AY007101|SRSF10|10772|serine/arginine-rich splicing factor 10##BC010074|SRSF10|10772|serine/arginine-rich splicing factor 10##BC005039|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001286|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001656|SRSF10|10772|serine/arginine-rich splicing factor 10##BC071575|SRSF10|10772|serine/arginine-rich splicing factor 10##AF419331|SRSF10|10772|serine/arginine-rich splicing factor 10	0.960274	CTCF.p2:13:0.960
chr3	59561274	59561401	reg1004464.p1	13.876	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-525577	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-525596	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-525629	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	1675753	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	1985874	+	BC047734 TSC_hg19_v1_chr3_+_61547294	1985949	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.99967	CTCF.p2:-1:1.000
chr1	159768743	159768868	reg1003252.p1	13.875	+	TSC_hg19_v1_chr1_+_159750758 AK000449 NM_017823 BC001140 AB164404 AF086553	-17931	+	M35163 BC125135 X56214 X56692 AK289443 AK313624 BC020766 BC070257 NM_000567	-84479	-	BC007039 BC007058 BC070178 NM_001639 X04608 TSC_hg19_v1_chr1_+_159557615 AB587585 BT006750 CR450313 CU675509 M10944	-211142	+	NM_001004310 AY212514 AY654627 AY654628 AY513661	3388	+	NM_020125 TSC_hg19_v1_chr1_+_159796486	27678	+	TSC_hg19_v1_chr1_+_159796539 AK074669 AF146761	27773	+	AK000449|DUSP23|54935|dual specificity phosphatase 23##NM_017823|DUSP23|54935|dual specificity phosphatase 23##BC001140|DUSP23|54935|dual specificity phosphatase 23##AB164404|DUSP23|54935|dual specificity phosphatase 23##AF086553|DUSP23|54935|dual specificity phosphatase 23##M35163|CRP|1401|C-reactive protein, pentraxin-related##BC125135|CRP|1401|C-reactive protein, pentraxin-related##X56214|CRP|1401|C-reactive protein, pentraxin-related##X56692|CRP|1401|C-reactive protein, pentraxin-related##AK289443|CRP|1401|C-reactive protein, pentraxin-related##AK313624|CRP|1401|C-reactive protein, pentraxin-related##BC020766|CRP|1401|C-reactive protein, pentraxin-related##BC070257|CRP|1401|C-reactive protein, pentraxin-related##NM_000567|CRP|1401|C-reactive protein, pentraxin-related##BC007039|APCS|325|amyloid P component, serum##BC007058|APCS|325|amyloid P component, serum##BC070178|APCS|325|amyloid P component, serum##NM_001639|APCS|325|amyloid P component, serum##X04608|APCS|325|amyloid P component, serum##BT006750|APCS|325|amyloid P component, serum##CR450313|APCS|325|amyloid P component, serum##M10944|APCS|325|amyloid P component, serum##NM_001004310|FCRL6|343413|Fc receptor-like 6##AY212514|FCRL6|343413|Fc receptor-like 6##AY654627|FCRL6|343413|Fc receptor-like 6##AY654628|FCRL6|343413|Fc receptor-like 6##AY513661|FCRL6|343413|Fc receptor-like 6##NM_020125|SLAMF8|56833|SLAM family member 8##AK074669|SLAMF8|56833|SLAM family member 8##AF146761|SLAMF8|56833|SLAM family member 8	0.981014	CTCF.p2:-17:0.981
chr11	84275771	84275897	reg1004527.p1	13.874	+	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	-247453	-	AK294375 AK126776 AK295624 NM_001142700	-291558	-	AK299778 CR933674 NM_001142702	-882383	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	358398	-	U32376 AB209252 AK295094 NM_001364	358616	-	CR749820 NM_001142699	1062479	-	AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)##U32376|DLG2|1740|discs, large homolog 2 (Drosophila)##AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)##CR749820|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142699|DLG2|1740|discs, large homolog 2 (Drosophila)	0.997509	CTCF.p2:-1:0.998
chr3	112453706	112453843	reg1004566.p1	13.874	+	AY548106 AY548107 TSC_hg19_v1_chr3_-_112359991 BC110842 AY526612 NM_199511 NM_199512 AK304561	-93797	-	BX647117 TSC_hg19_v1_chr3_-_112359888 BC116178 BC116179 AY333429 AF506819	-93891	-	TSC_hg19_v1_chr3_-_112359660 AK292881	-94108	-	BC144504 BC144507 AY284976 AY552790 NM_001008784 NM_001199215	111018	-	AF283760 BC069661 BC069721 BC069743 AF495380 AF497548 AF497549 AF497550 BC093890 BC143393 AK304426 AK293071 AY284975 AK126349 NM_138806 NM_138939 NM_138940 NM_170780 AY358910	240061	-	TSC_hg19_v1_chr3_+_112709777 AK292651	256004	+	AY548106|CCDC80|151887|coiled-coil domain containing 80##AY548107|CCDC80|151887|coiled-coil domain containing 80##BC110842|CCDC80|151887|coiled-coil domain containing 80##AY526612|CCDC80|151887|coiled-coil domain containing 80##NM_199511|CCDC80|151887|coiled-coil domain containing 80##NM_199512|CCDC80|151887|coiled-coil domain containing 80##AK304561|CCDC80|151887|coiled-coil domain containing 80##BX647117|CCDC80|151887|coiled-coil domain containing 80##BC116178|CCDC80|151887|coiled-coil domain containing 80##BC116179|CCDC80|151887|coiled-coil domain containing 80##AY333429|CCDC80|151887|coiled-coil domain containing 80##AF506819|CCDC80|151887|coiled-coil domain containing 80##AK292881|CCDC80|151887|coiled-coil domain containing 80##BC144504|CD200R1L|344807|CD200 receptor 1-like##BC144507|CD200R1L|344807|CD200 receptor 1-like##AY284976|CD200R1L|344807|CD200 receptor 1-like##AY552790|CD200R1L|344807|CD200 receptor 1-like##NM_001008784|CD200R1L|344807|CD200 receptor 1-like##NM_001199215|CD200R1L|344807|CD200 receptor 1-like##AF283760|CD200R1|131450|CD200 receptor 1##BC069661|CD200R1|131450|CD200 receptor 1##BC069721|CD200R1|131450|CD200 receptor 1##BC069743|CD200R1|131450|CD200 receptor 1##AF495380|CD200R1|131450|CD200 receptor 1##AF497548|CD200R1|131450|CD200 receptor 1##AF497549|CD200R1|131450|CD200 receptor 1##AF497550|CD200R1|131450|CD200 receptor 1##BC093890|CD200R1|131450|CD200 receptor 1##BC143393|CD200R1|131450|CD200 receptor 1##AK304426|CD200R1|131450|CD200 receptor 1##AK293071|CD200R1|131450|CD200 receptor 1##AY284975|CD200R1|131450|CD200 receptor 1##AK126349|CD200R1|131450|CD200 receptor 1##NM_138806|CD200R1|131450|CD200 receptor 1##NM_138939|CD200R1|131450|CD200 receptor 1##NM_138940|CD200R1|131450|CD200 receptor 1##NM_170780|CD200R1|131450|CD200 receptor 1##AY358910|CD200R1|131450|CD200 receptor 1##AK292651|GTPBP8|29083|GTP-binding protein 8 (putative)	0.976039	CTCF.p2:-17:0.976
chr9	3240811	3240940	reg1004519.p1	13.872	+	AK127804 TSC_hg19_v1_chr9_-_3223066	-17839	-	TSC_hg19_v1_chr9_-_2844102 AK315531 NM_014878	-396762	-	TSC_hg19_v1_chr9_-_2844084 AL832245 AK225953 AL832239	-396786	-	TSC_hg19_v1_chr9_-_3525889 AK310956 AK289540	284964	-	TSC_hg19_v1_chr9_-_3525983 BC022191 NM_002919 NM_134428	285129	-	TSC_hg19_v1_chr9_+_3526079 AK125504	285213	+	AK315531|KIAA0020|9933|KIAA0020##NM_014878|KIAA0020|9933|KIAA0020##AL832245|KIAA0020|9933|KIAA0020##AK225953|KIAA0020|9933|KIAA0020##AL832239|KIAA0020|9933|KIAA0020##AK310956|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK289540|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##BC022191|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_002919|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_134428|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)	0.999785	CTCF.p2:-9:1.000
chr12	54601692	54601800	reg1003861.p1	13.871	+	BC088352 BC000417 TSC_hg19_v1_chr12_-_54582755 AK091468 AX747003 NM_001243789 NM_001243790 BC105607 AK001789 AK001235 AK222473 AK290274 NM_001243787 NM_001243788 NM_001243791 NM_014311	-19060	-	BC030212 TSC_hg19_v1_chr12_-_54541132	-60665	-	TSC_hg19_v1_chr12_+_54519846 BC009385	-81888	+	BC006821 NM_001127322 TSC_hg19_v1_chr12_-_54653330	51578	-	NM_001127321 TSC_hg19_v1_chr12_-_54653370	51625	-	TSC_hg19_v1_chr12_-_54673880 L07515 S62077	72136	-	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC009385|LOC400043|400043|uncharacterized LOC400043##BC006821|CBX5|23468|chromobox homolog 5##NM_001127322|CBX5|23468|chromobox homolog 5##NM_001127321|CBX5|23468|chromobox homolog 5##L07515|CBX5|23468|chromobox homolog 5##S62077|CBX5|23468|chromobox homolog 5	0.998927	CTCF.p2:14:0.999
chr4	736544	736662	reg1005539.p1	13.871	+	TSC_hg19_v1_chr4_+_699570 AK225892 NM_006315 AK057124 AK300290 AK125801	-36973	+	TSC_hg19_v1_chr4_-_683107 AK292010	-53487	-	TSC_hg19_v1_chr4_-_682967 BC030246 NM_032219 AK025922	-53578	-	TSC_hg19_v1_chr4_-_775606 BC040652 AK055583	39019	-	AK126578 TSC_hg19_v1_chr4_-_819894 AK311921 AB593095 BC002471 NM_006651	83322	-	TSC_hg19_v1_chr4_-_925898 BT007015 D88435	189318	-	AK225892|PCGF3|10336|polycomb group ring finger 3##NM_006315|PCGF3|10336|polycomb group ring finger 3##AK057124|PCGF3|10336|polycomb group ring finger 3##AK300290|PCGF3|10336|polycomb group ring finger 3##AK125801|PCGF3|10336|polycomb group ring finger 3##AK292010|MFSD7|84179|major facilitator superfamily domain containing 7##BC030246|MFSD7|84179|major facilitator superfamily domain containing 7##NM_032219|MFSD7|84179|major facilitator superfamily domain containing 7##AK025922|MFSD7|84179|major facilitator superfamily domain containing 7##BC040652|LOC100129917|100129917|uncharacterized LOC100129917##AK055583|LOC100129917|100129917|uncharacterized LOC100129917##AK126578|CPLX1|10815|complexin 1##AK311921|CPLX1|10815|complexin 1##AB593095|CPLX1|10815|complexin 1##BC002471|CPLX1|10815|complexin 1##NM_006651|CPLX1|10815|complexin 1##BT007015|GAK|2580|cyclin G associated kinase##D88435|GAK|2580|cyclin G associated kinase	0.993293	CTCF.p2:-9:0.993
chr1	161041739	161041843	reg1003758.p1	13.870	+	TSC_hg19_v1_chr1_-_161039761 AK126116 AK126163 NM_001025598 NM_181720	-2032	-	TSC_hg19_v1_chr1_-_161039720 AK160366	-2071	-	TSC_hg19_v1_chr1_-_161039656 BX537846	-2134	-	AF426163 CU679709 DQ893504 DQ896483 AF160477 TSC_hg19_v1_chr1_-_161059349 BC010423 AK027753	17427	-	TSC_hg19_v1_chr1_-_161059357 NM_030916	17577	-	TSC_hg19_v1_chr1_+_161068152 BC032482 NM_001007255 NM_152366 AY601914 BC022077 BC066896 AK093268 AX748022	26379	+	AK126116|ARHGAP30|257106|Rho GTPase activating protein 30##AK126163|ARHGAP30|257106|Rho GTPase activating protein 30##NM_001025598|ARHGAP30|257106|Rho GTPase activating protein 30##NM_181720|ARHGAP30|257106|Rho GTPase activating protein 30##AK160366|ARHGAP30|257106|Rho GTPase activating protein 30##BX537846|ARHGAP30|257106|Rho GTPase activating protein 30##AF426163|PVRL4|81607|poliovirus receptor-related 4##DQ893504|PVRL4|81607|poliovirus receptor-related 4##DQ896483|PVRL4|81607|poliovirus receptor-related 4##AF160477|PVRL4|81607|poliovirus receptor-related 4##BC010423|PVRL4|81607|poliovirus receptor-related 4##AK027753|PVRL4|81607|poliovirus receptor-related 4##NM_030916|PVRL4|81607|poliovirus receptor-related 4##BC032482|KLHDC9|126823|kelch domain containing 9##NM_001007255|KLHDC9|126823|kelch domain containing 9##NM_152366|KLHDC9|126823|kelch domain containing 9##AY601914|KLHDC9|126823|kelch domain containing 9##BC022077|KLHDC9|126823|kelch domain containing 9##BC066896|KLHDC9|126823|kelch domain containing 9##AK093268|KLHDC9|126823|kelch domain containing 9	0.998725	CTCF.p2:5:0.999
chr17	37401116	37401235	reg1003655.p2	13.870	+	BC109231 AJ608762 AK131500 NM_198993	-19196	-	TSC_hg19_v1_chr17_+_37356579 BC000530 S56985 BC013016	-44594	+	TSC_hg19_v1_chr17_+_37356573 AK223082 BC062709 BX537435	-44603	+	TSC_hg19_v1_chr17_-_37557855 BC007557 DQ223959 AK312612 AK291844 AK123048 NM_001184906 NM_032875	156725	-	CU687400 BC131783 AF055994 BC006517 Y13467 BC060758 TSC_hg19_v1_chr17_-_37607519 AK299789 AK314185 NM_004774	206246	-	TSC_hg19_v1_chr17_+_37617760 NM_015083 NM_016507 AK302645	216577	+	BC109231|STAC2|342667|SH3 and cysteine rich domain 2##AJ608762|STAC2|342667|SH3 and cysteine rich domain 2##AK131500|STAC2|342667|SH3 and cysteine rich domain 2##NM_198993|STAC2|342667|SH3 and cysteine rich domain 2##BC000530|RPL19|6143|ribosomal protein L19##S56985|RPL19|6143|ribosomal protein L19##BC013016|RPL19|6143|ribosomal protein L19##AK223082|RPL19|6143|ribosomal protein L19##BC062709|RPL19|6143|ribosomal protein L19##BX537435|RPL19|6143|ribosomal protein L19##BC007557|FBXL20|84961|F-box and leucine-rich repeat protein 20##DQ223959|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK312612|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK291844|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK123048|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_001184906|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_032875|FBXL20|84961|F-box and leucine-rich repeat protein 20##BC131783|MED1|5469|mediator complex subunit 1##AF055994|MED1|5469|mediator complex subunit 1##BC006517|MED1|5469|mediator complex subunit 1##Y13467|MED1|5469|mediator complex subunit 1##BC060758|MED1|5469|mediator complex subunit 1##AK299789|MED1|5469|mediator complex subunit 1##AK314185|MED1|5469|mediator complex subunit 1##NM_004774|MED1|5469|mediator complex subunit 1##NM_015083|CDK12|51755|cyclin-dependent kinase 12##NM_016507|CDK12|51755|cyclin-dependent kinase 12##AK302645|CDK12|51755|cyclin-dependent kinase 12	0.999582	CTCF.p2:2:1.000
chr2	181923449	181923578	reg1002190.p1	13.869	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-77686	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-77870	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-78143	+	NM_000885	398105	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	398537	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	398809	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.996969	CTCF.p2:34:0.997
chr10	18393312	18393449	reg1005207.p1	13.868	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	-152551	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	-294987	+	NM_001098844 BC157856	-352159	+	NM_201593 NM_201596 NM_201597 S60415 BC136409 AF137376 AF423191 AY393860 AY675091 AK296471 AK311694 AK307526 NM_001167945 NM_201571 NM_201572 AK293837	36327	+	NM_000724 AB208917 U95019	156260	+	AK310943 NM_201590	236233	+	NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK310943|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201590|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	1.030477	CTCF.p2:11:0.999
chr2	201770574	201770693	reg1004246.p1	13.868	+	AY251943 AY251944 BC007654 NM_001142356 CU675739 DQ896612 AB463931 AL834430	-13914	+	NM_001136039 NM_001142355 TSC_hg19_v1_chr2_+_201754095 AF060513 AF283538 AK314709 NM_021824 AK225905 AB038949 AK023378 AF182416	-16515	+	TSC_hg19_v1_chr2_-_201753860 AF146799 AK297804 AF271652 AF251049 NM_032472 NM_130906 AF414127 AK027315 AY257468 BC007693	-16746	-	TSC_hg19_v1_chr2_-_201828407 AK316433 U40268 U27459 BC014834 AK302614 NM_006190	57686	-	AL832234 TSC_hg19_v1_chr2_-_201936363	165725	-	TSC_hg19_v1_chr2_-_201936368 AL833403	165743	-	AY251943|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AY251944|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##BC007654|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_001142356|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##DQ896612|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AL834430|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_001136039|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_001142355|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF060513|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF283538|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AK314709|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_021824|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AK225905|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AB038949|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AK023378|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF182416|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF146799|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AK297804|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AF271652|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AF251049|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##NM_032472|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##NM_130906|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AF414127|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AY257468|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##BC007693|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AK316433|ORC2|4999|origin recognition complex, subunit 2##U40268|ORC2|4999|origin recognition complex, subunit 2##U27459|ORC2|4999|origin recognition complex, subunit 2##BC014834|ORC2|4999|origin recognition complex, subunit 2##AK302614|ORC2|4999|origin recognition complex, subunit 2##NM_006190|ORC2|4999|origin recognition complex, subunit 2##AL832234|FAM126B|285172|family with sequence similarity 126, member B##AL833403|FAM126B|285172|family with sequence similarity 126, member B	0.998035	CTCF.p2:-14:0.998
chr11	65042607	65042725	reg1004425.p1	13.867	+	TSC_hg19_v1_chr11_+_65029432 AK309284 BC001347 BC002990 BC018813 BC018814 NM_002689 AK297842 AK307831 AK025315	-13260	+	AK131327 NM_001004326 BC146850	-61352	+	TSC_hg19_v1_chr11_+_64949413 BC017200	-93227	+	NM_006779 TSC_hg19_v1_chr11_+_65082336 AF001436 AF163840 AK315444 BC075834	39671	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	58618	+	TSC_hg19_v1_chr11_+_65101347 BC014889 AK291944 U94585 AB463002 BT006718 DQ892397 DQ895612	58685	+	AK309284|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC001347|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC002990|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018813|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018814|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_002689|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK297842|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK307831|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK025315|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK131327|SLC22A20|440044|solute carrier family 22, member 20##NM_001004326|SLC22A20|440044|solute carrier family 22, member 20##BC146850|SLC22A20|440044|solute carrier family 22, member 20##BC017200|CAPN1|823|calpain 1, (mu/I) large subunit##NM_006779|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF001436|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF163840|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AK315444|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##BC075834|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2##BC014889|DPF2|5977|D4, zinc and double PHD fingers family 2##AK291944|DPF2|5977|D4, zinc and double PHD fingers family 2##U94585|DPF2|5977|D4, zinc and double PHD fingers family 2##BT006718|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ892397|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ895612|DPF2|5977|D4, zinc and double PHD fingers family 2	0.069154	
chr1	180502774	180502907	reg1004677.p1	13.867	+	TSC_hg19_v1_chr1_-_180471976 AK314112 NM_032360	-30876	-	NM_033343 AF179849	-303404	+	TSC_hg19_v1_chr1_+_180124047 AB384905	-378784	+	TSC_hg19_v1_chr1_+_180601151 BC028576 NM_001135669 NM_004736	98297	+	AK309750 TSC_hg19_v1_chr1_+_180601157	98319	+	TSC_hg19_v1_chr1_+_180601171 BC041142 AF089744	98328	+	AK314112|ACBD6|84320|acyl-CoA binding domain containing 6##NM_032360|ACBD6|84320|acyl-CoA binding domain containing 6##NM_033343|LHX4|89884|LIM homeobox 4##AF179849|LHX4|89884|LIM homeobox 4##BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AK309750|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##BC041142|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF089744|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	0.98264	CTCF.p2:-19:0.983
chr15	68852072	68852190	reg1003648.p1	13.867	+	TSC_hg19_v1_chr15_-_68724505 AF109681 AF137378 NM_001004439 AK292445 AK304778 AK095863	-127633	-	TSC_hg19_v1_chr15_+_68570434 AK290167	-281707	+	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	-282038	+	TSC_hg19_v1_chr15_+_68871402 NM_006091	19212	+	NM_001190456	56747	+	AK289678 NM_001190457	72195	+	AF109681|ITGA11|22801|integrin, alpha 11##AF137378|ITGA11|22801|integrin, alpha 11##NM_001004439|ITGA11|22801|integrin, alpha 11##AK292445|ITGA11|22801|integrin, alpha 11##AK304778|ITGA11|22801|integrin, alpha 11##AK095863|ITGA11|22801|integrin, alpha 11##AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B##AK289678|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190457|CORO2B|10391|coronin, actin binding protein, 2B	0.997338	CTCF.p2:-11:0.997
chr3	111436521	111436662	reg1005093.p1	13.867	+	AK056141 NM_001185106 NM_153268 TSC_hg19_v1_chr3_+_111393527	-43066	+	NM_024508	-122410	-	AK290719 AK315237 TSC_hg19_v1_chr3_+_111261063 AL833681 CU676690	-175524	+	AK296841 NM_001134437 TSC_hg19_v1_chr3_+_111451348 CR749654 AK307491	14754	+	NM_001134438 NM_145753 AK096151 TSC_hg19_v1_chr3_+_111578114 AK315050	141480	+	TSC_hg19_v1_chr3_+_111578136 BC069194	141546	+	AK056141|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_001185106|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_153268|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_024508|ZBED2|79413|zinc finger, BED-type containing 2##AK290719|CD96|10225|CD96 molecule##AK315237|CD96|10225|CD96 molecule##AL833681|CD96|10225|CD96 molecule##AK296841|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001134437|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##CR749654|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK307491|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001134438|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_145753|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK096151|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK315050|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##BC069194|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	0.997527	CTCF.p2:-22:0.998
chr22	24643637	24643765	reg1004920.p1	13.865	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	-2722	-	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	-66257	+	TSC_hg19_v1_chr22_+_24577424 AK026431	-66274	+	TSC_hg19_v1_chr22_+_24666804 NM_001145468 NM_015330 AK097129 AK301482 AB209022 AL832425 BC005093 BC136471	23139	+	TSC_hg19_v1_chr22_+_24819870 EU036694	176179	+	NM_000675 AK123058 EU036693 AK301420 BC013780	179864	+	CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##AK026431|SUSD2|56241|sushi domain containing 2##NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##EU036694|ADORA2A|135|adenosine A2a receptor##NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor	1.133235	CTCF.p2:11:0.978
chr10	7163316	7163442	reg1003292.p1	13.862	+	TSC_hg19_v1_chr10_+_6622460 AY007155	-540899	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	-541118	-	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-918503	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	287871	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	290055	-	AK027849 TSC_hg19_v1_chr10_-_7659249	495838	-	AY007155|LOC439949|439949|uncharacterized LOC439949##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.981328	CTCF.p2:-10:0.981
chr1	231726452	231726576	reg1003305.p2	13.862	+	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	-62083	+	AF229245 NM_022051	-165725	-	TSC_hg19_v1_chr1_+_231473794 BC015740	-252727	+	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	36041	+	BC006013 NM_020808 AY168879	924755	-	TSC_hg19_v1_chr1_-_232878472 AK093200	1151943	-	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)##NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)##BC015740|C1orf124|83932|chromosome 1 open reading frame 124##AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1##BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	0.456942	CTCF.p2:7:0.457
chr20	57445475	57445604	reg1003382.p1	13.862	+	NM_001077490 NM_080425	-17504	+	AJ251759 TSC_hg19_v1_chr20_-_57425958	-19582	-	AF105253 NM_016592 TSC_hg19_v1_chr20_+_57414802	-30741	+	TSC_hg19_v1_chr20_+_57464205 X56009	18655	+	TSC_hg19_v1_chr20_+_57466445 NM_000516 NM_001077488 NM_001077489 NM_080426 AK026564 AK225818 BC008855 BC089157	20818	+	TSC_hg19_v1_chr20_+_57466632 BC108315 BC002722 BC104928 X04408	21075	+	NM_001077490|GNAS|2778|GNAS complex locus##NM_080425|GNAS|2778|GNAS complex locus##AJ251759|GNAS-AS1|149775|GNAS antisense RNA 1 (non-protein coding)##AF105253|GNAS|2778|GNAS complex locus##NM_016592|GNAS|2778|GNAS complex locus##X56009|GNAS|2778|GNAS complex locus##NM_000516|GNAS|2778|GNAS complex locus##NM_001077488|GNAS|2778|GNAS complex locus##NM_001077489|GNAS|2778|GNAS complex locus##NM_080426|GNAS|2778|GNAS complex locus##AK026564|GNAS|2778|GNAS complex locus##AK225818|GNAS|2778|GNAS complex locus##BC008855|GNAS|2778|GNAS complex locus##BC089157|GNAS|2778|GNAS complex locus##BC108315|GNAS|2778|GNAS complex locus##BC002722|GNAS|2778|GNAS complex locus##BC104928|GNAS|2778|GNAS complex locus##X04408|GNAS|2778|GNAS complex locus	0.965676	CTCF.p2:-21:0.966
chr8	110463282	110463411	reg1005496.p1	13.862	+	AY219181 NM_177531 BC093096 AK128617	-88617	+	TSC_hg19_v1_chr8_+_110346575 NM_001193557 NM_020189 AK095651 AK316560 AK000487 AK290752 BC051878 BC007870	-116753	+	AK301278 TSC_hg19_v1_chr8_-_110346317 BC000967 AK027897 BC043406 AK315006 BC031258 NM_032869 AF283301	-116975	-	TSC_hg19_v1_chr8_+_110551942 NM_198120 AK290651 BC017729	88639	+	NM_004215 BC005249 BC022506 AK308950 AB007619 AF006265 AY515724	89064	+	AK297182 TSC_hg19_v1_chr8_-_110620232	156880	-	AY219181|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##NM_177531|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##BC093096|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK301278|NUDCD1|84955|NudC domain containing 1##BC000967|NUDCD1|84955|NudC domain containing 1##AK027897|NUDCD1|84955|NudC domain containing 1##BC043406|NUDCD1|84955|NudC domain containing 1##AK315006|NUDCD1|84955|NudC domain containing 1##BC031258|NUDCD1|84955|NudC domain containing 1##NM_032869|NUDCD1|84955|NudC domain containing 1##AF283301|NUDCD1|84955|NudC domain containing 1##NM_198120|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK290651|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC017729|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##NM_004215|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC005249|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC022506|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK308950|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AB007619|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AF006265|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AY515724|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK297182|SYBU|55638|syntabulin (syntaxin-interacting)	0.980808	CTCF.p2:-5:0.981
chr8	77280183	77280304	reg1004065.p1	13.860	+	BX571750 NM_004133 EU832451 HQ692842	-828029	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	-960055	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-1383334	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	313267	+	AB083343 TSC_hg19_v1_chr8_+_77593533	313285	+	AK131399 TSC_hg19_v1_chr8_+_77765961	485646	+	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4##AB083343|ZFHX4|79776|zinc finger homeobox 4##AK131399|ZFHX4|79776|zinc finger homeobox 4	0.99958	CTCF.p2:-20:1.000
chr1	175450362	175450522	reg1003560.p1	13.859	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-288412	-	AK127044 NM_022093	-413449	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-457871	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	262268	-	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	725723	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	725876	-	D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2	0.061897	
chr6_cox_hap2	3853751	3853866	reg1004350.p1	13.859	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.430659	CTCF.p2:4:0.431
chr1	205030827	205030976	reg1004045.p1	13.858	+	X67734 X68274 TSC_hg19_v1_chr1_+_205012450	-18463	+	TSC_hg19_v1_chr1_+_205012339 NM_005076	-18563	+	TSC_hg19_v1_chr1_+_204938044 BC008124	-92839	+	BC061592 AY359081 NM_203376 AK303432	22686	-	AB527310 CU691040 DQ891205 DQ894388 BC075059 BC075060 AK290137 BC037284 AK296978 TSC_hg19_v1_chr1_-_205091104 X85134 BC053856	60166	-	TSC_hg19_v1_chr1_-_205091144 NM_001193272 NM_001193273 NM_005057	60246	-	X67734|CNTN2|6900|contactin 2 (axonal)##X68274|CNTN2|6900|contactin 2 (axonal)##NM_005076|CNTN2|6900|contactin 2 (axonal)##BC008124|NFASC|23114|neurofascin##BC061592|TMEM81|388730|transmembrane protein 81##AY359081|TMEM81|388730|transmembrane protein 81##NM_203376|TMEM81|388730|transmembrane protein 81##AK303432|TMEM81|388730|transmembrane protein 81##DQ891205|RBBP5|5929|retinoblastoma binding protein 5##DQ894388|RBBP5|5929|retinoblastoma binding protein 5##BC075059|RBBP5|5929|retinoblastoma binding protein 5##BC075060|RBBP5|5929|retinoblastoma binding protein 5##AK290137|RBBP5|5929|retinoblastoma binding protein 5##BC037284|RBBP5|5929|retinoblastoma binding protein 5##AK296978|RBBP5|5929|retinoblastoma binding protein 5##X85134|RBBP5|5929|retinoblastoma binding protein 5##BC053856|RBBP5|5929|retinoblastoma binding protein 5##NM_001193272|RBBP5|5929|retinoblastoma binding protein 5##NM_001193273|RBBP5|5929|retinoblastoma binding protein 5##NM_005057|RBBP5|5929|retinoblastoma binding protein 5	1.024717	CTCF.p2:-10:0.992
chr22	35979215	35979337	reg1003287.p2	13.858	+	BC013419 NM_014310 CR456477	-41883	+	TSC_hg19_v1_chr22_+_35936902 AX721069	-42374	+	TSC_hg19_v1_chr22_+_35796295 AB463121 CU013117 CU013405 CU674060 CU678562	-182914	+	CR541949 CU013116 CU013404 DQ893679 DQ896050 AB528844 CR456516 TSC_hg19_v1_chr22_-_36013480 AK300657 BC014547 NM_005368 AK314057 NM_203378	34152	-	TSC_hg19_v1_chr22_-_36019368 NM_203377	40105	-	TSC_hg19_v1_chr22_+_36044432 AY014879 NM_030641 BC047864 AX775805 AL834420 AK095881	65160	+	BC013419|RASD2|23551|RASD family, member 2##NM_014310|RASD2|23551|RASD family, member 2##CR456477|RASD2|23551|RASD family, member 2##CU013117|MCM5|4174|minichromosome maintenance complex component 5##CU013405|MCM5|4174|minichromosome maintenance complex component 5##CR541949|MB|4151|myoglobin##CU013116|MB|4151|myoglobin##CU013404|MB|4151|myoglobin##DQ893679|MB|4151|myoglobin##DQ896050|MB|4151|myoglobin##CR456516|MB|4151|myoglobin##AK300657|MB|4151|myoglobin##BC014547|MB|4151|myoglobin##NM_005368|MB|4151|myoglobin##AK314057|MB|4151|myoglobin##NM_203378|MB|4151|myoglobin##NM_203377|MB|4151|myoglobin##AY014879|APOL6|80830|apolipoprotein L, 6##NM_030641|APOL6|80830|apolipoprotein L, 6##BC047864|APOL6|80830|apolipoprotein L, 6##AL834420|APOL6|80830|apolipoprotein L, 6##AK095881|APOL6|80830|apolipoprotein L, 6	1.013271	CTCF.p2:14:1.000
chr2	208337980	208338101	reg1003254.p1	13.857	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-306415	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-307384	-	BC112076 BC112078 NM_173077 AJ422118	-533740	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	56603	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	56681	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	56741	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.040171	
chr11	75099882	75100012	reg1004544.p1	13.856	+	AF084040 AF084940 FJ348262 CU678548 AB462955 TSC_hg19_v1_chr11_-_75062708 AK289718 BC003636 NM_004041 NM_020251	-37131	-	NM_001195528	-147998	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	-229106	+	TSC_hg19_v1_chr11_+_75110562 D28344 AK130960 BC034149 NM_001005 AK129794 AK313051 BC013231 BC100284 X55715 BC071917 AK223048 BC003137 BC071669 S42658 AB464166 CU678394 DQ892888 DQ896136 U14990 U14991 U14992 BC003577 BC013196 AB062288	10628	+	HQ258227 BC132708 BC132710 TSC_hg19_v1_chr11_-_75141083 AK091109 AX746783	41113	-	TSC_hg19_v1_chr11_-_75141247 BC042952 BC057763	41284	-	AF084040|ARRB1|408|arrestin, beta 1##AF084940|ARRB1|408|arrestin, beta 1##FJ348262|ARRB1|408|arrestin, beta 1##AK289718|ARRB1|408|arrestin, beta 1##BC003636|ARRB1|408|arrestin, beta 1##NM_004041|ARRB1|408|arrestin, beta 1##NM_020251|ARRB1|408|arrestin, beta 1##NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##D28344|RPS3|6188|ribosomal protein S3##AK130960|RPS3|6188|ribosomal protein S3##BC034149|RPS3|6188|ribosomal protein S3##NM_001005|RPS3|6188|ribosomal protein S3##AK129794|RPS3|6188|ribosomal protein S3##AK313051|RPS3|6188|ribosomal protein S3##BC013231|RPS3|6188|ribosomal protein S3##BC100284|RPS3|6188|ribosomal protein S3##X55715|RPS3|6188|ribosomal protein S3##BC071917|RPS3|6188|ribosomal protein S3##AK223048|RPS3|6188|ribosomal protein S3##BC003137|RPS3|6188|ribosomal protein S3##BC071669|RPS3|6188|ribosomal protein S3##S42658|RPS3|6188|ribosomal protein S3##DQ892888|RPS3|6188|ribosomal protein S3##DQ896136|RPS3|6188|ribosomal protein S3##U14990|RPS3|6188|ribosomal protein S3##U14991|RPS3|6188|ribosomal protein S3##U14992|RPS3|6188|ribosomal protein S3##BC003577|RPS3|6188|ribosomal protein S3##BC013196|RPS3|6188|ribosomal protein S3##AB062288|RPS3|6188|ribosomal protein S3##HQ258227|KLHL35|283212|kelch-like 35 (Drosophila)##BC132708|KLHL35|283212|kelch-like 35 (Drosophila)##BC132710|KLHL35|283212|kelch-like 35 (Drosophila)##AK091109|KLHL35|283212|kelch-like 35 (Drosophila)##BC042952|KLHL35|283212|kelch-like 35 (Drosophila)##BC057763|KLHL35|283212|kelch-like 35 (Drosophila)	0.678275	CTCF.p2:-8:0.678
chr16	88227780	88227900	reg1004471.p1	13.856	+	AK094158 NM_001173543	-224217	+	AK315535 NM_001173542	-234364	+	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	-242672	+	NM_001127464	266038	+	TSC_hg19_v1_chr16_+_88519687 AF488691	291865	+	TSC_hg19_v1_chr16_+_88519921 NM_153813	292125	+	AK094158|BANP|54971|BTG3 associated nuclear protein##NM_001173543|BANP|54971|BTG3 associated nuclear protein##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein##NM_001127464|ZNF469|84627|zinc finger protein 469##AF488691|ZFPM1|161882|zinc finger protein, multitype 1##NM_153813|ZFPM1|161882|zinc finger protein, multitype 1	1.527171	CTCF.p2:-9:0.998	CTCF.p2:-43:0.529
chr3	59843591	59843709	reg1003682.p1	13.856	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-807890	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-807909	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-807942	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	1393440	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	1703561	+	BC047734 TSC_hg19_v1_chr3_+_61547294	1703636	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.998571	CTCF.p2:16:0.999
chr5	111482728	111482868	reg1003162.p2	13.856	+	AK298779 NM_001142474 NM_001142475	-170224	-	NM_001142477 TSC_hg19_v1_chr5_-_111093886 NM_001142476	-388945	-	NM_001142479 NM_001142480 BC011050 TSC_hg19_v1_chr5_-_111093377 NM_001142478	-389440	-	TSC_hg19_v1_chr5_+_111496560 AB002437	13771	+	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	272075	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	560413	+	AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13##BC011050|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13##AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli	0.999024	CTCF.p2:20:0.999
chr22	20772553	20772690	reg1004110.p1	13.855	+	TSC_hg19_v1_chr22_+_20748463 BC056902 X92715 AK291358 AK299569 NM_003426 BC048295 BC013741	-24176	+	NM_015672	-310836	-	BC072398 TSC_hg19_v1_chr22_-_20427830	-344791	-	AB052951 TSC_hg19_v1_chr22_-_20792077	19441	-	TSC_hg19_v1_chr22_-_20792108 AB024433 AF522196 NM_153334 NM_182895	19505	-	AK222850 TSC_hg19_v1_chr22_-_20850077 AK290669 AK294682 AK027266 BC015923 NM_032775	77501	-	BC056902|ZNF74|7625|zinc finger protein 74##X92715|ZNF74|7625|zinc finger protein 74##AK291358|ZNF74|7625|zinc finger protein 74##AK299569|ZNF74|7625|zinc finger protein 74##NM_003426|ZNF74|7625|zinc finger protein 74##BC048295|ZNF74|7625|zinc finger protein 74##BC013741|ZNF74|7625|zinc finger protein 74##NM_015672|RIMBP3|85376|RIMS binding protein 3##BC072398|PI4KAP1|728233|phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1##AB052951|SCARF2|91179|scavenger receptor class F, member 2##AB024433|SCARF2|91179|scavenger receptor class F, member 2##AF522196|SCARF2|91179|scavenger receptor class F, member 2##NM_153334|SCARF2|91179|scavenger receptor class F, member 2##NM_182895|SCARF2|91179|scavenger receptor class F, member 2##AK222850|KLHL22|84861|kelch-like 22 (Drosophila)##AK290669|KLHL22|84861|kelch-like 22 (Drosophila)##AK294682|KLHL22|84861|kelch-like 22 (Drosophila)##AK027266|KLHL22|84861|kelch-like 22 (Drosophila)##BC015923|KLHL22|84861|kelch-like 22 (Drosophila)##NM_032775|KLHL22|84861|kelch-like 22 (Drosophila)	0.996493	CTCF.p2:-19:0.996
chr22	22590122	22590261	reg1005174.p1	13.855	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	-20927	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	-40013	+	X02422 TSC_hg19_v1_chr22_+_22550141	-40062	+	BC017922 NM_007128 CR456609 CU013205 CU013493 AB590106	9020	+	TSC_hg19_v1_chr22_+_22652513 BC033148 AK090629 AX746545 BX641141	62328	+	TSC_hg19_v1_chr22_+_22676817 X64134 BC072392 X01147 X14583 AF026921 M99594 X52109 Z34915 M23164 M25909 X57806 HM996126 HM996151 HM996396 AY686894 FJ385568 HM996502 AJ430768 AJ430769 S77011 AB063974 AB063975 AB063986 AB063989 AB064002 AB064006 AB064009 AB064015 AB064025 AB064029 AB064033 AB064034 AB064035 AB114462 AB363340 AB363378 AB363388 AB363391 AB363396 AB363397 AF107243 AF107248 AF115349 AF115350 AF115351 AF124169 AF212992 AF462682 AJ238329 AJ238331 AJ298040 AJ399840 AJ399841 AJ399842 AJ399844 AJ399846 AJ399850 AJ399851 AJ399853 AJ399854 AJ399858 AJ399859 AJ399860 AJ399861 AJ399864 AJ399865 AM181147 AY043113 AY043142 AY515013 AY626661 AY626662 AY942003 AY942034 AY942047 AY942062 AY942072 AY942089 AY942103 AY942110 AY942122 AY942123 DQ098732 DQ098756 DQ109965 DQ109969 DQ187592 DQ187611 DQ187713 DQ187716 DQ187726 DQ322770 DQ322811 DQ322812 DQ322941 DQ322976 DQ322977 DQ490727 DQ840921 DQ840926 DQ840927 DQ840929 DQ840934 DQ840936 DQ840964 DQ840965 DQ840966 DQ840967 DQ840968 DQ840974 DQ841004 DQ841007 DQ841066 DQ841091 DQ841096 EF589418 EF589522 EF589535 EF589539 EF589563 EF589567 EU599335 FJ385464 JF740070 JF806463 JF806464 JF806465 JF806466 JF806467 L14452 L25298 L33985 L43120 M28078 U36536 U36537 U36538 U36539 U36540 U36541 U38335 U38336 U38337 U38338 U38339 U38340 U38341 U38342 U38343 U38344 U38345 U38346 U38347 X61641 X77018 X77473 Y09391 Z35495 Z46618 Z74662 Z74673 Z74675 Z74676 Z74677 Z74678 Z74679 Z74680 Z74691 DQ098729 DQ098733 DQ098760 AY050701 AJ399862 AJ633627 AY950790 U09886 U09906 AY062363 DQ322978 AF044479 AF044480 AF165108 AF165110 AJ233720 AJ241352 AJ241358 AJ241364 AJ241370 AJ241372 AJ241373 AJ241374 AM259149 AY960869 X79782 AJ233725 AJ233731 AM259147 L19909 L38567 U27188 U27190 AF103609 AF103652 S79247 AF103678 AF103599 AF103672 AF103707 Y17942 AF103603 AF103607 AF103688 AF103627 AF103666 AY134496 AY145444 AF103699 DQ187717 AY998676	86769	+	BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57##BC017922|VPREB1|7441|pre-B lymphocyte 1##NM_007128|VPREB1|7441|pre-B lymphocyte 1##CR456609|VPREB1|7441|pre-B lymphocyte 1##CU013205|VPREB1|7441|pre-B lymphocyte 1##CU013493|VPREB1|7441|pre-B lymphocyte 1##BC033148|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##AK090629|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##BX641141|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene	0.978536	CTCF.p2:10:0.979
chr8	20898728	20898850	reg1004388.p1	13.855	+	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	-786043	-	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	-843867	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	-843896	+	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	747003	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	747577	-	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	872376	-	AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa	0.999656	CTCF.p2:-13:1.000
chr9	79425408	79425539	reg1004781.p1	13.855	+	AY196297 NM_001097636	-309925	+	AY196296 NM_001097635	-332217	+	NM_001097633 NM_001490 TSC_hg19_v1_chr9_+_79074142 AY196294 AY196295 AL832647	-351357	+	AB535152 FJ808772 FJ808773 BC019095 NM_015225 TSC_hg19_v1_chr9_-_79521026	95479	-	NM_001013735	209097	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	366866	+	AY196297|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097636|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097633|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001490|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196294|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196295|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AL832647|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AB535152|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808772|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808773|PRUNE2|158471|prune homolog 2 (Drosophila)##BC019095|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_015225|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_001013735|FOXB2|442425|forkhead box B2##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)	0.02134	
chr12	89936849	89936981	reg1003432.p1	13.854	+	AK297677 NM_001199781 NM_001199782 NM_172240	-16877	-	CU693124 TSC_hg19_v1_chr12_-_89919778 BX647258 AK074772 AK295596 BC026080 EF011619	-17155	-	TSC_hg19_v1_chr12_-_89919208 AK123106 NM_001199777	-17653	-	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	112936	-	TSC_hg19_v1_chr12_+_90102640 BC040326	165772	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	166630	+	AK297677|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199781|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199782|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_172240|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BX647258|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##AK074772|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK295596|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BC026080|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##EF011619|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK123106|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##NM_001199777|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC040326|LOC338758|338758|uncharacterized LOC338758##BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758	0.643741	CTCF.p2:-17:0.644
chr9	124449279	124449383	reg1003894.p1	13.853	+	NM_032552	-119933	+	AF378121 AF378122 AF378123 TSC_hg19_v1_chr9_-_124262101 BC045756	-187242	-	BC010703 TSC_hg19_v1_chr9_-_124132529 AK307999 AK304449 AK304518 AK302977 NM_004099 NM_198194	-316789	-	TSC_hg19_v1_chr9_+_124461442 AF367051	12175	+	AY032952 NM_138709	55732	+	TSC_hg19_v1_chr9_-_124855560 AK125178	406257	-	NM_032552|DAB2IP|153090|DAB2 interacting protein##AF378121|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378122|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378123|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC045756|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC010703|STOM|2040|stomatin##AK307999|STOM|2040|stomatin##AK304449|STOM|2040|stomatin##AK304518|STOM|2040|stomatin##AK302977|STOM|2040|stomatin##NM_004099|STOM|2040|stomatin##NM_198194|STOM|2040|stomatin##AF367051|DAB2IP|153090|DAB2 interacting protein##AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11	0.979287	CTCF.p2:-3:0.954
chr11	131087319	131087421	reg1002582.p2	13.851	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-300982	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-301025	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-768708	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	153099	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	693254	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	693969	+	NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin	0.952157	CTCF.p2:0:0.952
chr14	45382995	45383102	reg1006987.p2	13.851	+	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	-16550	+	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	-406573	-	NM_152447 AK096627	-3306281	+	BC121009 BC121010 TSC_hg19_v1_chr14_-_45431102	48048	-	TSC_hg19_v1_chr14_-_45431142 AK289855 NM_017658	48102	-	TSC_hg19_v1_chr14_+_45431421 AK295185 AB007883 CR749557 NM_015091 BC057255 AK096934 AK311034 AK307722 BX648723	48360	+	NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##BC121009|KLHL28|54813|kelch-like 28 (Drosophila)##BC121010|KLHL28|54813|kelch-like 28 (Drosophila)##AK289855|KLHL28|54813|kelch-like 28 (Drosophila)##NM_017658|KLHL28|54813|kelch-like 28 (Drosophila)##AK295185|FAM179B|23116|family with sequence similarity 179, member B##AB007883|FAM179B|23116|family with sequence similarity 179, member B##CR749557|FAM179B|23116|family with sequence similarity 179, member B##NM_015091|FAM179B|23116|family with sequence similarity 179, member B##BC057255|FAM179B|23116|family with sequence similarity 179, member B##AK096934|FAM179B|23116|family with sequence similarity 179, member B##AK311034|FAM179B|23116|family with sequence similarity 179, member B##BX648723|FAM179B|23116|family with sequence similarity 179, member B	0.30842	CTCF.p2:-5:0.308
chr17	54669970	54670086	reg1004024.p1	13.851	+	NM_153228 AK095654	-439192	+	TSC_hg19_v1_chr17_+_53828441 AF114430 NM_001102402 AK058120 BC005112	-841428	+	AK024667 AK314509 TSC_hg19_v1_chr17_+_53828413 BC012084	-841607	+	AK314080 NM_005450 TSC_hg19_v1_chr17_+_54671080	1041	+	BC093905 BC093907 NM_001085430	223221	-	BC041467 TSC_hg19_v1_chr17_-_54911271	241245	-	NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AF114430|PCTP|58488|phosphatidylcholine transfer protein##NM_001102402|PCTP|58488|phosphatidylcholine transfer protein##AK058120|PCTP|58488|phosphatidylcholine transfer protein##BC005112|PCTP|58488|phosphatidylcholine transfer protein##AK024667|PCTP|58488|phosphatidylcholine transfer protein##AK314509|PCTP|58488|phosphatidylcholine transfer protein##BC012084|PCTP|58488|phosphatidylcholine transfer protein##AK314080|NOG|9241|noggin##NM_005450|NOG|9241|noggin##BC093905|C17orf67|339210|chromosome 17 open reading frame 67##BC093907|C17orf67|339210|chromosome 17 open reading frame 67##NM_001085430|C17orf67|339210|chromosome 17 open reading frame 67##BC041467|C17orf67|339210|chromosome 17 open reading frame 67	0.994708	CTCF.p2:-4:0.995
chr19	45192568	45192713	reg1004115.p1	13.851	+	BC083499 NM_001127893 NM_020219	-17917	+	TSC_hg19_v1_chr19_+_45147209 AK300349 AK094177 BC015542	-45424	+	TSC_hg19_v1_chr19_+_45147180 AK290946	-45459	+	BC144608 NM_001039213	9780	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	59341	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	88516	+	BC083499|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_001127893|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_020219|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##AK300349|PVR|5817|poliovirus receptor##AK094177|PVR|5817|poliovirus receptor##BC015542|PVR|5817|poliovirus receptor##AK290946|PVR|5817|poliovirus receptor##BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	0.999467	CTCF.p2:-17:0.999
chr2	8825996	8826129	reg1004379.p3	13.851	+	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-3859	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1768475	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1808199	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	151657	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	317759	-	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	520830	+	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	0.999743	CTCF.p2:1:1.000
chr10	92511307	92511427	reg1004237.p1	13.850	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-1012600	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-1049992	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-1106043	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	106079	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	106366	-	TSC_hg19_v1_chr10_+_92631241 BC006991	119890	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.99268	CTCF.p2:-15:0.993
chr11	62078751	62078855	reg1002643.p2	13.850	+	HQ258026 AY236538 BC130639 BC130645 AY359052 NM_206998	-12294	-	BC067220 NM_002411 U33147 BC128252 BC128402 AY217100	-41145	+	NM_006551 BC069290 BC104840 BC104838	-69063	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	26022	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	26145	+	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	107733	+	HQ258026|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY236538|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130639|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130645|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY359052|SCGB1D4|404552|secretoglobin, family 1D, member 4##NM_206998|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC067220|SCGB2A2|4250|secretoglobin, family 2A, member 2##NM_002411|SCGB2A2|4250|secretoglobin, family 2A, member 2##U33147|SCGB2A2|4250|secretoglobin, family 2A, member 2##BC128252|SCGB2A2|4250|secretoglobin, family 2A, member 2##BC128402|SCGB2A2|4250|secretoglobin, family 2A, member 2##AY217100|SCGB2A2|4250|secretoglobin, family 2A, member 2##NM_006551|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC069290|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104840|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104838|SCGB1D2|10647|secretoglobin, family 1D, member 2##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	0.996122	CTCF.p2:5:0.996
chr17	48703621	48703724	reg1002858.p1	13.850	+	TSC_hg19_v1_chr17_+_48638339 BC110995 AF124351 NM_018896 NM_198376 NM_198377 NM_198378 NM_198379 NM_198380 NM_198382 NM_198383 NM_198384 NM_198385 NM_198386 NM_198387 NM_198388 NM_198396 NM_198397	-65279	+	AK092731 TSC_hg19_v1_chr17_+_48624553 BC111029 AK025000 AK225189 AK291805 BC025255 NM_022827 BC065526 AK308616	-79114	+	TSC_hg19_v1_chr17_+_48610095 AK000785 AK291658 AK292977 AK295730 AK296346 AK300642 BC001038 BC051365 BC077722	-93569	+	TSC_hg19_v1_chr17_+_48712188 BC046126 NM_001144070 NM_003786 AF009670 Y17151 BC058907 AF085690 AF085691 AF085692 BC104952 BC137347 BC137348 AB208954 AF083552 AB010887 BC050370 AF104943 AB384796	8537	+	AK314010 CR627413 TSC_hg19_v1_chr17_-_48785180 BC012978 EU164539 NM_052855	81471	-	TSC_hg19_v1_chr17_+_48796963 NM_006107 NM_016424 AK290540 AK225980 AK023672 BC047043 BC056409 BC002925 AK295983 DQ013876 AK001925	93321	+	BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##AK092731|SPATA20|64847|spermatogenesis associated 20##BC111029|SPATA20|64847|spermatogenesis associated 20##AK025000|SPATA20|64847|spermatogenesis associated 20##AK225189|SPATA20|64847|spermatogenesis associated 20##AK291805|SPATA20|64847|spermatogenesis associated 20##BC025255|SPATA20|64847|spermatogenesis associated 20##NM_022827|SPATA20|64847|spermatogenesis associated 20##BC065526|SPATA20|64847|spermatogenesis associated 20##AK308616|SPATA20|64847|spermatogenesis associated 20##AK000785|EPN3|55040|epsin 3##AK291658|EPN3|55040|epsin 3##AK292977|EPN3|55040|epsin 3##AK295730|EPN3|55040|epsin 3##AK296346|EPN3|55040|epsin 3##AK300642|EPN3|55040|epsin 3##BC001038|EPN3|55040|epsin 3##BC051365|EPN3|55040|epsin 3##BC077722|EPN3|55040|epsin 3##BC046126|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_001144070|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_003786|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF009670|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##Y17151|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC058907|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085690|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085691|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085692|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC104952|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137347|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137348|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB208954|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF083552|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB010887|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC050370|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF104943|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AK314010|ANKRD40|91369|ankyrin repeat domain 40##CR627413|ANKRD40|91369|ankyrin repeat domain 40##BC012978|ANKRD40|91369|ankyrin repeat domain 40##EU164539|ANKRD40|91369|ankyrin repeat domain 40##NM_052855|ANKRD40|91369|ankyrin repeat domain 40##NM_006107|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_016424|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK290540|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK225980|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK023672|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC047043|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC056409|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC002925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK295983|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##DQ013876|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK001925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)	0.996975	CTCF.p2:-1:0.997
chr10	63798508	63798665	reg1003366.p1	13.849	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-137155	+	NM_032199	-137574	+	BC041932 NM_173554	-375868	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	10510	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	229953	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	335457	+	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365	0.949166	CTCF.p2:10:0.949
chr14	65450552	65450678	reg1004561.p1	13.849	+	CU691918 BC040679 AB672631 AB672632 AB678453 AB678452 NM_198686 TSC_hg19_v1_chr14_-_65439010	-11592	-	BC022820 TSC_hg19_v1_chr14_-_65409460 AK225871 BC005277 BC067221 BC016756 X68314 X53463 BC039850 BC046164 NM_002083	-41100	-	TSC_hg19_v1_chr14_+_65381184 AK296141 AK303739 AK296850	-69421	+	AK315714 NM_002028 TSC_hg19_v1_chr14_+_65453591	2904	+	TSC_hg19_v1_chr14_+_65453605 BC013574 AK225917 L00635 BC020232 BX248269 DQ892128 DQ895321	3022	+	BC035148 BC052775 TSC_hg19_v1_chr14_+_65453967	3351	+	BC040679|RAB15|376267|RAB15, member RAS onocogene family##AB678452|RAB15|376267|RAB15, member RAS onocogene family##NM_198686|RAB15|376267|RAB15, member RAS onocogene family##BC022820|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##AK225871|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC005277|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC067221|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC016756|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##X68314|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##X53463|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC039850|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC046164|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##NM_002083|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##AK296141|CHURC1|91612|churchill domain containing 1##AK303739|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##AK296850|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##AK315714|FNTB|2342|farnesyltransferase, CAAX box, beta##NM_002028|FNTB|2342|farnesyltransferase, CAAX box, beta##BC013574|FNTB|2342|farnesyltransferase, CAAX box, beta##AK225917|FNTB|2342|farnesyltransferase, CAAX box, beta##L00635|FNTB|2342|farnesyltransferase, CAAX box, beta##BC020232|FNTB|2342|farnesyltransferase, CAAX box, beta##BX248269|FNTB|2342|farnesyltransferase, CAAX box, beta##DQ892128|FNTB|2342|farnesyltransferase, CAAX box, beta##DQ895321|FNTB|2342|farnesyltransferase, CAAX box, beta	0.0	
chrX	135777086	135777204	reg1002553.p2	13.849	+	AK129909 TSC_hg19_v1_chrX_-_135749484	-27679	-	BC071754 NM_000074 AK292637 X68550 X67878 L07414 BC074950 X96710 Z15017 FN298241 CU687160 AB590912 AF529195 AY197739	-46774	+	BC000045 NM_016267 AK309912 BC003362 AF137387	-162778	+	AK294929 TSC_hg19_v1_chrX_-_135849503 AK295709 AK299861	72362	-	D25304 TSC_hg19_v1_chrX_-_135863046 AK291742	85908	-	TSC_hg19_v1_chrX_-_135863105 BX537390	85964	-	AK129909|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##BC071754|CD40LG|959|CD40 ligand##NM_000074|CD40LG|959|CD40 ligand##AK292637|CD40LG|959|CD40 ligand##X68550|CD40LG|959|CD40 ligand##X67878|CD40LG|959|CD40 ligand##L07414|CD40LG|959|CD40 ligand##BC074950|CD40LG|959|CD40 ligand##Z15017|CD40LG|959|CD40 ligand##FN298241|CD40LG|959|CD40 ligand##AF529195|CD40LG|959|CD40 ligand##AY197739|CD40LG|959|CD40 ligand##BC000045|VGLL1|51442|vestigial like 1 (Drosophila)##NM_016267|VGLL1|51442|vestigial like 1 (Drosophila)##AK309912|VGLL1|51442|vestigial like 1 (Drosophila)##BC003362|VGLL1|51442|vestigial like 1 (Drosophila)##AF137387|VGLL1|51442|vestigial like 1 (Drosophila)##AK294929|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK295709|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK299861|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##D25304|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK291742|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##BX537390|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	0.369021	CTCF.p2:14:0.369
chr10	93672689	93672833	reg1003454.p1	13.848	+	AK315427 BC025966 AK075410 NM_152429	-3541	-	TSC_hg19_v1_chr10_-_93668642 AB464522 DQ503576	-4085	-	TSC_hg19_v1_chr10_+_93558308 AF329696 AF264912 AF342982	-114397	+	TSC_hg19_v1_chr10_+_93683526 AK308399	10755	+	TSC_hg19_v1_chr10_+_93683569 AF038362 NM_003972 BC112201 AJ001017	10931	+	AB023157 NM_001178137 TSC_hg19_v1_chr10_-_94003035	330258	-	AK315427|FGFBP3|143282|fibroblast growth factor binding protein 3##BC025966|FGFBP3|143282|fibroblast growth factor binding protein 3##AK075410|FGFBP3|143282|fibroblast growth factor binding protein 3##NM_152429|FGFBP3|143282|fibroblast growth factor binding protein 3##DQ503576|FGFBP3|143282|fibroblast growth factor binding protein 3##AF329696|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF264912|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF342982|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AK308399|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AF038362|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##NM_003972|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##BC112201|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AJ001017|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3	0.226251	CTCF.p2:22:0.226
chr17	54897147	54897272	reg1003456.p1	13.848	+	BC093905 BC093907 NM_001085430	-3960	-	AK314080 NM_005450 TSC_hg19_v1_chr17_+_54671080	-226140	+	NM_153228 AK095654	-666373	+	BC041467 TSC_hg19_v1_chr17_-_54911271	14064	-	TSC_hg19_v1_chr17_+_54911515 NM_003647 BC022297 AK310668 AK293039 U49379	14295	+	AB384815 TSC_hg19_v1_chr17_-_54991388 D21205 AB208994 BC016924 BC042541	94163	-	BC093905|C17orf67|339210|chromosome 17 open reading frame 67##BC093907|C17orf67|339210|chromosome 17 open reading frame 67##NM_001085430|C17orf67|339210|chromosome 17 open reading frame 67##AK314080|NOG|9241|noggin##NM_005450|NOG|9241|noggin##NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##BC041467|C17orf67|339210|chromosome 17 open reading frame 67##NM_003647|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##BC022297|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##AK310668|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##AK293039|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##U49379|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##D21205|TRIM25|7706|tripartite motif containing 25##AB208994|TRIM25|7706|tripartite motif containing 25##BC016924|TRIM25|7706|tripartite motif containing 25##BC042541|TRIM25|7706|tripartite motif containing 25	0.936488	CTCF.p2:-1:0.936
chr17	8798360	8798501	reg1004118.p1	13.848	+	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-27446	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-95878	-	BC146949 BC146966 BC171861 NM_001128076	-136554	-	AY725853 AF128881 NM_014308	17386	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	70551	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	126537	+	BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##BC146949|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC146966|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC171861|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##NM_001128076|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1	0.971401	CTCF.p2:10:0.971
chr7	96734103	96734223	reg1003265.p1	13.848	+	BC006226 TSC_hg19_v1_chr7_-_96654144 AK023493 NM_005221 AK297614	-79969	-	NM_005222	-98874	+	TSC_hg19_v1_chr7_-_96633611 AK091367 AX746939 BC101445 BC101446 BC101447 BC101985 BC113049	-100552	-	BC028409 NM_020186	11741	+	TSC_hg19_v1_chr7_+_96747012 BC022858 AF201933 BC020621	12867	+	NM_003182 NM_013996 NM_013997 NM_013998 U37529 AK222957 BC018047 X54469	627189	+	BC006226|DLX5|1749|distal-less homeobox 5##AK023493|DLX5|1749|distal-less homeobox 5##NM_005221|DLX5|1749|distal-less homeobox 5##AK297614|DLX5|1749|distal-less homeobox 5##NM_005222|DLX6|1750|distal-less homeobox 6##AK091367|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101445|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101446|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101447|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101985|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC113049|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC022858|ACN9|57001|ACN9 homolog (S. cerevisiae)##AF201933|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC020621|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_003182|TAC1|6863|tachykinin, precursor 1##NM_013996|TAC1|6863|tachykinin, precursor 1##NM_013997|TAC1|6863|tachykinin, precursor 1##NM_013998|TAC1|6863|tachykinin, precursor 1##U37529|TAC1|6863|tachykinin, precursor 1##AK222957|TAC1|6863|tachykinin, precursor 1##BC018047|TAC1|6863|tachykinin, precursor 1##X54469|TAC1|6863|tachykinin, precursor 1	0.510004	CTCF.p2:-22:0.510
chr3	27753685	27753803	reg1003434.p1	13.847	+	TSC_hg19_v1_chr3_-_27525893 AK309734	-227814	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	-227919	-	AF047033 AF089726 NM_003615	-255500	-	AB031038 BC131712 NM_005442 AB463608 BC037568	10049	-	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	10457	-	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	529354	+	AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)	0.997497	CTCF.p2:-15:0.997
chr9	93677317	93677438	reg1003211.p1	13.847	+	NM_001174167 X73568	-87644	+	TSC_hg19_v1_chr9_+_93564206 NM_001174168 BC011399	-113162	+	TSC_hg19_v1_chr9_+_93564100 AK290927	-113262	+	TSC_hg19_v1_chr9_-_94124185 AB528075 AM393420 CU676666 DQ892036 DQ895227 X79888 AK302453	446793	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	446822	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	508667	-	NM_001174167|SYK|6850|spleen tyrosine kinase##X73568|SYK|6850|spleen tyrosine kinase##NM_001174168|SYK|6850|spleen tyrosine kinase##BC011399|SYK|6850|spleen tyrosine kinase##AK290927|SYK|6850|spleen tyrosine kinase##AM393420|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ892036|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ895227|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##X79888|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK302453|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated	0.998654	CTCF.p2:-13:0.999
chr10	135143365	135143490	reg1003926.p1	13.846	+	TSC_hg19_v1_chr10_+_135122914 EU937518	-20512	+	AK223586 NM_006659	-20831	-	TSC_hg19_v1_chr10_+_135122444 BC015139 BC019897 NM_145806 AK091711 AX747142 AK292380	-21018	+	TSC_hg19_v1_chr10_-_135150429 BC038978 AF225903	6975	-	NM_015722 TSC_hg19_v1_chr10_-_135150480	7050	-	NM_001145201 NM_145202 AY358908 BC093853 BC101743 BC143590 BC143591 BC143592 TSC_hg19_v1_chr10_+_135160889 AF421885 GU727628 BC061643 BC071872	17449	+	AK223586|TUBGCP2|10844|tubulin, gamma complex associated protein 2##NM_006659|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC015139|ZNF511|118472|zinc finger protein 511##BC019897|ZNF511|118472|zinc finger protein 511##NM_145806|ZNF511|118472|zinc finger protein 511##AK091711|ZNF511|118472|zinc finger protein 511##AK292380|ZNF511|118472|zinc finger protein 511##BC038978|CALY|50632|calcyon neuron-specific vesicular protein##AF225903|CALY|50632|calcyon neuron-specific vesicular protein##NM_015722|CALY|50632|calcyon neuron-specific vesicular protein##NM_001145201|PRAP1|118471|proline-rich acidic protein 1##NM_145202|PRAP1|118471|proline-rich acidic protein 1##AY358908|PRAP1|118471|proline-rich acidic protein 1##BC093853|PRAP1|118471|proline-rich acidic protein 1##BC101743|PRAP1|118471|proline-rich acidic protein 1##BC143590|PRAP1|118471|proline-rich acidic protein 1##BC143591|PRAP1|118471|proline-rich acidic protein 1##BC143592|PRAP1|118471|proline-rich acidic protein 1##AF421885|PRAP1|118471|proline-rich acidic protein 1##BC061643|PRAP1|118471|proline-rich acidic protein 1##BC071872|PRAP1|118471|proline-rich acidic protein 1	0.999465	CTCF.p2:-8:0.999
chr16	88803861	88803992	reg1003703.p1	13.845	+	TSC_hg19_v1_chr16_+_88772910 BC121805 BC125269 NM_001012759 NM_001012762 BC157881 AK299521 BC108659 BC021056 BC063512 BC080540	-31003	+	TSC_hg19_v1_chr16_-_88772809 NM_178841	-31104	-	CU680704 HQ258016 TSC_hg19_v1_chr16_-_88772797 BC013948 AK290920 BC017226 NM_001171815	-31158	-	NM_001142864 AB384448 TSC_hg19_v1_chr16_-_88851456	47492	-	AB053172 NM_030928 TSC_hg19_v1_chr16_+_88870207	66271	+	TSC_hg19_v1_chr16_+_88870215 AF321125 BC000137 BC009410 BC008860 BC008676	66354	+	BC121805|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC125269|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_001012759|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_001012762|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC157881|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##AK299521|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC108659|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC021056|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC063512|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC080540|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_178841|RNF166|115992|ring finger protein 166##HQ258016|RNF166|115992|ring finger protein 166##BC013948|RNF166|115992|ring finger protein 166##AK290920|RNF166|115992|ring finger protein 166##BC017226|RNF166|115992|ring finger protein 166##NM_001171815|RNF166|115992|ring finger protein 166##NM_001142864|PIEZO1|9780|piezo-type mechanosensitive ion channel component 1##AB384448|PIEZO1|9780|piezo-type mechanosensitive ion channel component 1##AB053172|CDT1|81620|chromatin licensing and DNA replication factor 1##NM_030928|CDT1|81620|chromatin licensing and DNA replication factor 1##AF321125|CDT1|81620|chromatin licensing and DNA replication factor 1##BC000137|CDT1|81620|chromatin licensing and DNA replication factor 1##BC009410|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008860|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008676|CDT1|81620|chromatin licensing and DNA replication factor 1	1.099911	CTCF.p2:-25:1.000
chr19	55187845	55187945	reg1001376.p1	13.845	+	TSC_hg19_v1_chr19_+_55174436 AF283988 EU915607 BC026309 AF025532 DQ892089 DQ895282 CU693206 CR542048 U82979	-13440	+	TSC_hg19_v1_chr19_+_55174417 AK292082 AK309227 AK314783	-13482	+	NM_001081438 NM_006847	-13772	+	BC136283 BC143802 NM_153443 AJ938052 AJ938053 AJ938054 AJ938055 AJ938056 AJ938057 AJ938058 AJ938059 AJ938060 AJ938061 AJ938062 AJ938063 AJ938064 AJ938065 AJ938066 AF022048	48081	+	L41268 NM_015868 BC050730 U24074 U73395 BC110613 BC032422 L76662 L76663 U50546 DQ890622 DQ893791 AY789057 FN395076 FN552550	62105	+	U24078 AY366240 NM_014218 AY366241 AF285431 AY789055 AY366237 L41267 AY366239 AY388471 BC069344 U24076 AF022045 CU686761 AY789056 AY366238 AJ417554 AJ417555 BC125147	93397	+	AF283988|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##EU915607|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##BC026309|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AF025532|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##DQ892089|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##DQ895282|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##CR542048|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##U82979|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK292082|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK309227|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK314783|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##NM_001081438|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##NM_006847|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##BC136283|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##BC143802|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##NM_153443|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938052|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938053|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938054|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938055|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938056|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938057|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938058|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938059|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938060|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938061|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938062|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938063|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938064|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938065|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938066|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AF022048|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##L41268|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##NM_015868|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##BC050730|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##U24074|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##U73395|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##BC110613|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##BC032422|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##L76662|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##L76663|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##U50546|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##DQ890622|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##DQ893791|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##AY789057|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##U24078|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY366240|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##NM_014218|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY366241|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AF285431|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY789055|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY366237|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##L41267|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY366239|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY388471|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##BC069344|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##U24076|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AF022045|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY789056|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY366238|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AJ417554|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AJ417555|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##BC125147|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4	0.881043	CTCF.p2:13:0.881
chr8	37010838	37010974	reg1004376.p1	13.845	+	NM_001031836 AK302391 BC028701	-369036	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-1917919	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-3553411	-	TSC_hg19_v1_chr8_-_37457377 AK025743	446462	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	542411	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	583200	+	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2	0.999915	CTCF.p2:10:1.000
chr19	7149265	7149389	reg1004450.p1	13.844	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-49776	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-79612	+	AK315405 NM_001044387 NM_001044388 NM_024341	-79865	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	144633	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	310680	+	TSC_hg19_v1_chr19_+_7460061 AB011093	310750	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.994439	CTCF.p2:-16:0.994
chrX	152805057	152805156	reg1003450.p1	13.844	+	NM_001001344 NM_021949 U57971 U60414 BC130009	-3494	+	DQ891898 DQ895084 AB463441 AM392603 AM393683 CU678628 BT007323 AK298756 TSC_hg19_v1_chrX_+_152770289	-34920	+	TSC_hg19_v1_chrX_+_152760466 BC002416 BC004244 J04599 AK223302	-44645	+	BC071851 AB528134 TSC_hg19_v1_chrX_-_152864584 BC001909 BC007232 BC032121	59404	-	TSC_hg19_v1_chrX_-_152864639 NM_001130997 NM_152274	59529	-	TSC_hg19_v1_chrX_+_152907894 AK314250 NM_001395 Y08302	102833	+	NM_001001344|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##NM_021949|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##U57971|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##U60414|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##BC130009|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##DQ891898|BGN|633|biglycan##DQ895084|BGN|633|biglycan##AM392603|BGN|633|biglycan##AM393683|BGN|633|biglycan##BT007323|BGN|633|biglycan##AK298756|BGN|633|biglycan##BC002416|BGN|633|biglycan##BC004244|BGN|633|biglycan##J04599|BGN|633|biglycan##AK223302|BGN|633|biglycan##BC071851|FAM58A|92002|family with sequence similarity 58, member A##BC001909|FAM58A|92002|family with sequence similarity 58, member A##BC007232|FAM58A|92002|family with sequence similarity 58, member A##BC032121|FAM58A|92002|family with sequence similarity 58, member A##NM_001130997|FAM58A|92002|family with sequence similarity 58, member A##NM_152274|FAM58A|92002|family with sequence similarity 58, member A##AK314250|DUSP9|1852|dual specificity phosphatase 9##NM_001395|DUSP9|1852|dual specificity phosphatase 9##Y08302|DUSP9|1852|dual specificity phosphatase 9	1.171605	CTCF.p2:19:0.987
chr12	105446957	105447071	reg1002936.p2	13.843	+	TSC_hg19_v1_chr12_+_105380115 BC032326 CU689336 DQ891649 DQ894838	-66893	+	TSC_hg19_v1_chr12_+_105380107 NM_152318	-66924	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	-124751	-	TSC_hg19_v1_chr12_-_105478356 EU832777 GQ129303 AK095827 AK300373 BC103934 BC103935 NM_001034173	31301	-	BC032033 TSC_hg19_v1_chr12_-_105501422	54402	-	TSC_hg19_v1_chr12_+_105501508 AK001657 NM_015275 AB028956 AK001728	54473	+	BC032326|C12orf45|121053|chromosome 12 open reading frame 45##DQ891649|C12orf45|121053|chromosome 12 open reading frame 45##DQ894838|C12orf45|121053|chromosome 12 open reading frame 45##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##EU832777|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##GQ129303|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##AK095827|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##AK300373|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##BC103934|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##BC103935|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##NM_001034173|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##BC032033|LOC414300|414300|uncharacterized LOC414300##AK001657|KIAA1033|23325|KIAA1033##NM_015275|KIAA1033|23325|KIAA1033##AB028956|KIAA1033|23325|KIAA1033##AK001728|KIAA1033|23325|KIAA1033	0.991904	CTCF.p2:2:0.992
chr10	81247484	81247588	reg1002834.p2	13.842	+	TSC_hg19_v1_chr10_-_81205381 AK308876 AK075279 BC053564 BC039249 BC028617 NM_153367	-42276	-	TSC_hg19_v1_chr10_+_81107279 AB529152 CU678858 EU831447	-140249	+	BC013204 BC110299 TSC_hg19_v1_chr10_+_81107252	-140287	+	BC070048 NM_001099692	24820	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	72615	-	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	123168	+	AK308876|ZCCHC24|219654|zinc finger, CCHC domain containing 24##AK075279|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC053564|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC039249|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC028617|ZCCHC24|219654|zinc finger, CCHC domain containing 24##NM_153367|ZCCHC24|219654|zinc finger, CCHC domain containing 24##EU831447|PPIF|10105|peptidylprolyl isomerase F##BC013204|PPIF|10105|peptidylprolyl isomerase F##BC110299|PPIF|10105|peptidylprolyl isomerase F##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1	0.644535	CTCF.p2:0:0.645
chr12	46466041	46466179	reg1005001.p1	13.842	+	TSC_hg19_v1_chr12_-_46385857 AK026473	-80235	-	TSC_hg19_v1_chr12_-_46384378 NM_004719	-81685	-	AK096682 TSC_hg19_v1_chr12_-_46384348 AF030234	-81763	-	AK074851 CU679761 DQ891017 EU176550 AK074949 AK313731 TSC_hg19_v1_chr12_-_46633674	167503	-	TSC_hg19_v1_chr12_-_46662567 AF247166	196456	-	TSC_hg19_v1_chr12_-_46662776 BC010620 BX648676	196633	-	AK026473|SCAF11|9169|SR-related CTD-associated factor 11##NM_004719|SCAF11|9169|SR-related CTD-associated factor 11##AK096682|SCAF11|9169|SR-related CTD-associated factor 11##AF030234|SCAF11|9169|SR-related CTD-associated factor 11##AK074851|SLC38A1|81539|solute carrier family 38, member 1##DQ891017|SLC38A1|81539|solute carrier family 38, member 1##EU176550|SLC38A1|81539|solute carrier family 38, member 1##AK074949|SLC38A1|81539|solute carrier family 38, member 1##AK313731|SLC38A1|81539|solute carrier family 38, member 1##AF247166|SLC38A1|81539|solute carrier family 38, member 1##BC010620|SLC38A1|81539|solute carrier family 38, member 1##BX648676|SLC38A1|81539|solute carrier family 38, member 1	0.668449	CTCF.p2:-14:0.668
chr13	29937271	29937389	reg1004333.p1	13.842	+	BC150245 AB018317 NM_001033602 AB384524	-338555	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	-644275	-	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	-704036	+	BC032481 NM_015233 AK293970 BC119654 BC119655 BC129985	65480	+	AK301633 TSC_hg19_v1_chr13_+_30070532	133177	+	X59155 X57303 TSC_hg19_v1_chr13_-_30169595 AK312818 BC063303	232291	-	BC150245|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AB018317|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_001033602|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK301633|MTUS2|23281|microtubule associated tumor suppressor candidate 2##X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	0.284629	CTCF.p2:0:0.285
chr2	65267912	65268041	reg1003398.p2	13.842	+	TSC_hg19_v1_chr2_+_65216532 AK223486 AK313052 BC072423 BC026216 L14595 L19444 AB026689 DQ891127 DQ894306	-51326	+	TSC_hg19_v1_chr2_+_65216485 AK298472 AK315986 NM_003038	-51485	+	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	-52376	+	TSC_hg19_v1_chr2_+_65283579 AB011154 NM_015147 AK093846 AK000856 AK299373 AK304110 AK301173 AK098786 BX648774 BC030534 BC002982 BC004873	15584	+	AF498929 BT019528 BT019529 CR533479 CR536488 AB464118 AB590355 AM392684 CU674450 DQ894084 EU831590 EU831675 TSC_hg19_v1_chr2_-_65357083 M28209	89099	-	TSC_hg19_v1_chr2_-_65357236 BC000905 BX571747 AL050268 AK303678 AK055927 AK315495	89243	-	AK223486|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK313052|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC072423|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC026216|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L14595|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L19444|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AB026689|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ891127|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ894306|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AB011154|CEP68|23177|centrosomal protein 68kDa##NM_015147|CEP68|23177|centrosomal protein 68kDa##AK093846|CEP68|23177|centrosomal protein 68kDa##AK000856|CEP68|23177|centrosomal protein 68kDa##AK299373|CEP68|23177|centrosomal protein 68kDa##AK304110|CEP68|23177|centrosomal protein 68kDa##AK301173|CEP68|23177|centrosomal protein 68kDa##AK098786|CEP68|23177|centrosomal protein 68kDa##BX648774|CEP68|23177|centrosomal protein 68kDa##BC030534|CEP68|23177|centrosomal protein 68kDa##BC002982|CEP68|23177|centrosomal protein 68kDa##BC004873|CEP68|23177|centrosomal protein 68kDa##AF498929|RAB1A|5861|RAB1A, member RAS oncogene family##BT019528|RAB1A|5861|RAB1A, member RAS oncogene family##BT019529|RAB1A|5861|RAB1A, member RAS oncogene family##CR533479|RAB1A|5861|RAB1A, member RAS oncogene family##CR536488|RAB1A|5861|RAB1A, member RAS oncogene family##AM392684|RAB1A|5861|RAB1A, member RAS oncogene family##DQ894084|RAB1A|5861|RAB1A, member RAS oncogene family##EU831590|RAB1A|5861|RAB1A, member RAS oncogene family##EU831675|RAB1A|5861|RAB1A, member RAS oncogene family##M28209|RAB1A|5861|RAB1A, member RAS oncogene family##BC000905|RAB1A|5861|RAB1A, member RAS oncogene family##BX571747|RAB1A|5861|RAB1A, member RAS oncogene family##AL050268|RAB1A|5861|RAB1A, member RAS oncogene family##AK303678|RAB1A|5861|RAB1A, member RAS oncogene family##AK055927|RAB1A|5861|RAB1A, member RAS oncogene family##AK315495|RAB1A|5861|RAB1A, member RAS oncogene family	0.774044	CTCF.p2:5:0.774
chr5	38193319	38193444	reg1004039.p1	13.842	+	AF053748 NM_000514	-353600	-	AJ001897 AJ001898 NM_001190468 NM_001190469	-357453	-	AJ001899 NM_199231	-357789	-	NM_001205301 NM_152403 AK096474 TSC_hg19_v1_chr5_+_38258532	65142	+	BX647551 TSC_hg19_v1_chr5_+_38258660 BC063822 AK291602	65285	+	CU687828 TSC_hg19_v1_chr5_+_38258922	65508	+	AF053748|GDNF|2668|glial cell derived neurotrophic factor##NM_000514|GDNF|2668|glial cell derived neurotrophic factor##AJ001897|GDNF|2668|glial cell derived neurotrophic factor##AJ001898|GDNF|2668|glial cell derived neurotrophic factor##NM_001190468|GDNF|2668|glial cell derived neurotrophic factor##NM_001190469|GDNF|2668|glial cell derived neurotrophic factor##AJ001899|GDNF|2668|glial cell derived neurotrophic factor##NM_199231|GDNF|2668|glial cell derived neurotrophic factor##NM_001205301|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_152403|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK096474|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BX647551|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC063822|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK291602|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains	0.997804	CTCF.p2:20:0.998
chr1	213094385	213094522	reg1003697.p2	13.841	+	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	-62773	+	TSC_hg19_v1_chr1_-_213031441 AY030238 AY030239 AK092887	-62989	-	AY640234 BC035742 NM_001024601	-73485	-	TSC_hg19_v1_chr1_+_213123945 AK290973 NM_001136474 NM_001136475 NM_024749 AK022567 AK096605 BC053836 BC051856 BC028194	29464	+	AK302675 TSC_hg19_v1_chr1_+_213124038	29570	+	TSC_hg19_v1_chr1_-_213188830 AK299208	94358	-	AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AY030238|FLVCR1-AS1|642946|FLVCR1 antisense RNA 1 (non-protein coding)##AY030239|FLVCR1-AS1|642946|FLVCR1 antisense RNA 1 (non-protein coding)##AY640234|C1orf227|149643|chromosome 1 open reading frame 227##BC035742|C1orf227|149643|chromosome 1 open reading frame 227##NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227##AK290973|VASH2|79805|vasohibin 2##NM_001136474|VASH2|79805|vasohibin 2##NM_001136475|VASH2|79805|vasohibin 2##NM_024749|VASH2|79805|vasohibin 2##AK022567|VASH2|79805|vasohibin 2##AK096605|VASH2|79805|vasohibin 2##BC053836|VASH2|79805|vasohibin 2##BC051856|VASH2|79805|vasohibin 2##BC028194|VASH2|79805|vasohibin 2##AK302675|VASH2|79805|vasohibin 2##AK299208|ANGEL2|90806|angel homolog 2 (Drosophila)	0.410759	CTCF.p2:1:0.411
chr3	44574443	44574566	reg1004784.p1	13.841	+	TSC_hg19_v1_chr3_-_44552121 AK296954	-22381	-	TSC_hg19_v1_chr3_-_44552109 BC014381	-22408	-	TSC_hg19_v1_chr3_-_44519163 AY295873 NM_181489	-55345	-	TSC_hg19_v1_chr3_+_44596684 AK291285 AY280798 NM_018651 NM_025169 BC063020 AK022800 BC010555	22168	+	TSC_hg19_v1_chr3_+_44626458 AK094189 NM_173658	51952	+	TSC_hg19_v1_chr3_+_44666527 AY279353 NM_001024855 NM_006991 AK314196 AY074878 BC031209	92039	+	AK296954|ZNF852|285346|zinc finger protein 852##BC014381|ZNF852|285346|zinc finger protein 852##AY295873|ZNF445|353274|zinc finger protein 445##NM_181489|ZNF445|353274|zinc finger protein 445##AK291285|ZNF167|55888|zinc finger protein 167##AY280798|ZNF167|55888|zinc finger protein 167##NM_018651|ZNF167|55888|zinc finger protein 167##NM_025169|ZNF167|55888|zinc finger protein 167##BC063020|ZNF167|55888|zinc finger protein 167##AK022800|ZNF167|55888|zinc finger protein 167##BC010555|ZNF167|55888|zinc finger protein 167##AK094189|ZNF660|285349|zinc finger protein 660##NM_173658|ZNF660|285349|zinc finger protein 660##AY279353|ZNF197|10168|zinc finger protein 197##NM_001024855|ZNF197|10168|zinc finger protein 197##NM_006991|ZNF197|10168|zinc finger protein 197##AK314196|ZNF197|10168|zinc finger protein 197##AY074878|ZNF197|10168|zinc finger protein 197##BC031209|ZNF197|10168|zinc finger protein 197	0.957243	CTCF.p2:-36:0.957
chr16	21595458	21595574	reg1003810.p1	13.840	+	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	-63764	-	BC036263 NM_130464	-158859	-	BX648477 NM_001014444 NM_001888	-281129	-	TSC_hg19_v1_chr16_+_21610912 NM_001077180 NM_016025 AJ278577 AJ278578 AK074529 BC000195 AK313077 AK075022 AK075237	15374	+	AF151839 TSC_hg19_v1_chr16_+_21611174	15638	+	TSC_hg19_v1_chr16_-_21663930 DQ892013 DQ895202 EU176227 EU176324 AK313860 AK223286 AK290910 AK293703 BC017844	68404	-	BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BX648477|CRYM|1428|crystallin, mu##NM_001014444|CRYM|1428|crystallin, mu##NM_001888|CRYM|1428|crystallin, mu##NM_001077180|METTL9|51108|methyltransferase like 9##NM_016025|METTL9|51108|methyltransferase like 9##AJ278577|METTL9|51108|methyltransferase like 9##AJ278578|METTL9|51108|methyltransferase like 9##AK074529|METTL9|51108|methyltransferase like 9##BC000195|METTL9|51108|methyltransferase like 9##AK313077|METTL9|51108|methyltransferase like 9##AK075022|METTL9|51108|methyltransferase like 9##AK075237|METTL9|51108|methyltransferase like 9##AF151839|METTL9|51108|methyltransferase like 9##DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6##DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6##EU176227|IGSF6|10261|immunoglobulin superfamily, member 6##EU176324|IGSF6|10261|immunoglobulin superfamily, member 6##AK313860|IGSF6|10261|immunoglobulin superfamily, member 6##AK223286|IGSF6|10261|immunoglobulin superfamily, member 6##AK290910|IGSF6|10261|immunoglobulin superfamily, member 6##AK293703|IGSF6|10261|immunoglobulin superfamily, member 6##BC017844|IGSF6|10261|immunoglobulin superfamily, member 6	0.613875	CTCF.p2:-30:0.614
chr12	102167490	102167615	reg1003392.p1	13.839	+	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	-34333	-	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	-75930	+	AK296681 NM_002465 NM_206819 NM_206820 NM_206821 AK056587 AK292976 AK295727 AK303401 BC015187 BC030980 BC065720 TSC_hg19_v1_chr12_+_101988748 BC092418 X66276 X73114 AL831993 AL832000 AL832332 AL832350 AL832354 AL832456 BC117217 BC143495 BC143502 BC143503 BC143504 AL834249 BX649073 AB385254 AM392734 EU831907 EU832001	-178756	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	57034	-	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	103566	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	103906	+	AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##AK296681|MYBPC1|4604|myosin binding protein C, slow type##NM_002465|MYBPC1|4604|myosin binding protein C, slow type##NM_206819|MYBPC1|4604|myosin binding protein C, slow type##NM_206820|MYBPC1|4604|myosin binding protein C, slow type##NM_206821|MYBPC1|4604|myosin binding protein C, slow type##AK056587|MYBPC1|4604|myosin binding protein C, slow type##AK292976|MYBPC1|4604|myosin binding protein C, slow type##AK295727|MYBPC1|4604|myosin binding protein C, slow type##AK303401|MYBPC1|4604|myosin binding protein C, slow type##BC015187|MYBPC1|4604|myosin binding protein C, slow type##BC030980|MYBPC1|4604|myosin binding protein C, slow type##BC065720|MYBPC1|4604|myosin binding protein C, slow type##BC092418|MYBPC1|4604|myosin binding protein C, slow type##X66276|MYBPC1|4604|myosin binding protein C, slow type##X73114|MYBPC1|4604|myosin binding protein C, slow type##AL831993|MYBPC1|4604|myosin binding protein C, slow type##AL832000|MYBPC1|4604|myosin binding protein C, slow type##AL832332|MYBPC1|4604|myosin binding protein C, slow type##AL832350|MYBPC1|4604|myosin binding protein C, slow type##AL832354|MYBPC1|4604|myosin binding protein C, slow type##AL832456|MYBPC1|4604|myosin binding protein C, slow type##BC117217|MYBPC1|4604|myosin binding protein C, slow type##BC143495|MYBPC1|4604|myosin binding protein C, slow type##BC143502|MYBPC1|4604|myosin binding protein C, slow type##BC143503|MYBPC1|4604|myosin binding protein C, slow type##BC143504|MYBPC1|4604|myosin binding protein C, slow type##AL834249|MYBPC1|4604|myosin binding protein C, slow type##BX649073|MYBPC1|4604|myosin binding protein C, slow type##AM392734|MYBPC1|4604|myosin binding protein C, slow type##EU831907|MYBPC1|4604|myosin binding protein C, slow type##EU832001|MYBPC1|4604|myosin binding protein C, slow type##AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1	0.999222	CTCF.p2:-10:0.999
chr1	45766040	45766191	reg1003872.p1	13.839	+	TSC_hg19_v1_chr1_-_45672278 AB040944 NM_020883	-93864	-	TSC_hg19_v1_chr1_+_45478442 AK293702	-287664	+	TSC_hg19_v1_chr1_+_45477917 AF104421 AF104422 AF104423 AF104424 AF104425 AF104426 AF104427 AF104428 AF104429 AF104430 AF104431 AF104432 AF104433 AF104434 AF104435 AF104436 AF104437 AF104438 AF104439 AF104440 AK295284 M14016 BX647308 AK225053 AK308996 DQ890688 DQ893870 AB529048 BT006737 CR456976 CR542057	-288189	+	TSC_hg19_v1_chr1_+_45769564 BC035497	3460	+	NM_032756 BC007293	26445	+	AY169960 NM_025077 TSC_hg19_v1_chr1_+_45805393	39270	+	AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5##NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5##AK293702|UROD|7389|uroporphyrinogen decarboxylase##AF104421|UROD|7389|uroporphyrinogen decarboxylase##AF104422|UROD|7389|uroporphyrinogen decarboxylase##AF104423|UROD|7389|uroporphyrinogen decarboxylase##AF104424|UROD|7389|uroporphyrinogen decarboxylase##AF104425|UROD|7389|uroporphyrinogen decarboxylase##AF104426|UROD|7389|uroporphyrinogen decarboxylase##AF104427|UROD|7389|uroporphyrinogen decarboxylase##AF104428|UROD|7389|uroporphyrinogen decarboxylase##AF104429|UROD|7389|uroporphyrinogen decarboxylase##AF104430|UROD|7389|uroporphyrinogen decarboxylase##AF104431|UROD|7389|uroporphyrinogen decarboxylase##AF104432|UROD|7389|uroporphyrinogen decarboxylase##AF104433|UROD|7389|uroporphyrinogen decarboxylase##AF104434|UROD|7389|uroporphyrinogen decarboxylase##AF104435|UROD|7389|uroporphyrinogen decarboxylase##AF104436|UROD|7389|uroporphyrinogen decarboxylase##AF104437|UROD|7389|uroporphyrinogen decarboxylase##AF104438|UROD|7389|uroporphyrinogen decarboxylase##AF104439|UROD|7389|uroporphyrinogen decarboxylase##AF104440|UROD|7389|uroporphyrinogen decarboxylase##AK295284|UROD|7389|uroporphyrinogen decarboxylase##M14016|UROD|7389|uroporphyrinogen decarboxylase##BX647308|UROD|7389|uroporphyrinogen decarboxylase##AK225053|UROD|7389|uroporphyrinogen decarboxylase##AK308996|UROD|7389|uroporphyrinogen decarboxylase##DQ890688|UROD|7389|uroporphyrinogen decarboxylase##DQ893870|UROD|7389|uroporphyrinogen decarboxylase##BT006737|UROD|7389|uroporphyrinogen decarboxylase##CR456976|UROD|7389|uroporphyrinogen decarboxylase##CR542057|UROD|7389|uroporphyrinogen decarboxylase##BC035497|LOC400752|400752|uncharacterized LOC400752##NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##AY169960|TOE1|114034|target of EGR1, member 1 (nuclear)##NM_025077|TOE1|114034|target of EGR1, member 1 (nuclear)	0.280383	CTCF.p2:5:0.280
chr17	5140904	5141085	reg1003522.p2	13.839	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	-2893	-	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-45614	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-45821	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	44672	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	181931	-	AY775314 AY775315 AY775316 AY775317 AY775318 AY775319 AY775320 AY775321 AY775323 NM_001033002 NM_001160243 NM_001160244 NM_001160246 NM_001160266 NM_001160267	181966	+	DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa##AY775314|RPAIN|84268|RPA interacting protein##AY775315|RPAIN|84268|RPA interacting protein##AY775316|RPAIN|84268|RPA interacting protein##AY775317|RPAIN|84268|RPA interacting protein##AY775318|RPAIN|84268|RPA interacting protein##AY775319|RPAIN|84268|RPA interacting protein##AY775320|RPAIN|84268|RPA interacting protein##AY775321|RPAIN|84268|RPA interacting protein##AY775323|RPAIN|84268|RPA interacting protein##NM_001033002|RPAIN|84268|RPA interacting protein##NM_001160243|RPAIN|84268|RPA interacting protein##NM_001160244|RPAIN|84268|RPA interacting protein##NM_001160246|RPAIN|84268|RPA interacting protein##NM_001160266|RPAIN|84268|RPA interacting protein##NM_001160267|RPAIN|84268|RPA interacting protein	1.765469	CTCF.p2:31:0.996	CTCF.p2:-55:0.770
chr19	921827	921972	reg1002486.p1	13.839	+	TSC_hg19_v1_chr19_+_917306 BC141812 NM_032551 AY253982 BC140825 AB051065 AF343725 AJ309020 AY029541 AY253981 BC111094 EU883577	-4506	+	NM_138774 TSC_hg19_v1_chr19_-_913224	-8675	-	TSC_hg19_v1_chr19_-_913199 BC012775	-8702	-	TSC_hg19_v1_chr19_+_926038 AY845638 BC060828 NM_005224	4112	+	TSC_hg19_v1_chr19_+_984344 NM_024100 BC000040 BC001648 CU674808	62435	+	TSC_hg19_v1_chr19_+_1000312 AY507106 AY507107 NM_138690	78466	+	BC141812|KISS1R|84634|KISS1 receptor##NM_032551|KISS1R|84634|KISS1 receptor##AY253982|KISS1R|84634|KISS1 receptor##BC140825|KISS1R|84634|KISS1 receptor##AB051065|KISS1R|84634|KISS1 receptor##AF343725|KISS1R|84634|KISS1 receptor##AJ309020|KISS1R|84634|KISS1 receptor##AY029541|KISS1R|84634|KISS1 receptor##AY253981|KISS1R|84634|KISS1 receptor##EU883577|KISS1R|84634|KISS1 receptor##NM_138774|R3HDM4|91300|R3H domain containing 4##BC012775|R3HDM4|91300|R3H domain containing 4##AY845638|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC060828|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_005224|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_024100|WDR18|57418|WD repeat domain 18##BC000040|WDR18|57418|WD repeat domain 18##BC001648|WDR18|57418|WD repeat domain 18##AY507106|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##AY507107|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_138690|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B	1.924709	CTCF.p2:-14:0.929	CTCF.p2:-97:0.996
chr19	15667310	15667433	reg1003672.p2	13.838	+	NM_173483 AK096820	-48036	+	BC136551 BC136552 BC144238 AF384856 AY358156 TSC_hg19_v1_chr19_-_15590313 AK289415 AB073610 AK055882 NM_052890	-77112	-	AK024488 TSC_hg19_v1_chr19_-_15575356 AK122587 NM_022904	-92004	-	AK300530 AK300539 NM_007253 AK300478 AK096809 AK314685	58658	+	AB002454 AK296761 AK296802 AK298675 AK316136 NM_000896 NM_001199208 NM_001199209 AK304200 BC136299 D12620 D12621	84352	+	NM_023944 AK304138 TSC_hg19_v1_chr19_+_15783896 AK304389 AK075435 AL832171 BC035350 AY358977 AB035130 AB035131	116501	+	NM_173483|CYP4F22|126410|cytochrome P450, family 4, subfamily F, polypeptide 22##AK096820|CYP4F22|126410|cytochrome P450, family 4, subfamily F, polypeptide 22##BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2##BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2##BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2##AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2##AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2##AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2##AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2##AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2##NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2##AK024488|RASAL3|64926|RAS protein activator like 3##AK122587|RASAL3|64926|RAS protein activator like 3##NM_022904|RASAL3|64926|RAS protein activator like 3##AK300530|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK300539|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##NM_007253|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK300478|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK096809|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK314685|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AB002454|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK296761|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK296802|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK298675|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK316136|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_000896|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_001199208|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_001199209|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK304200|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##BC136299|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##D12620|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##D12621|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_023944|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK304138|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK304389|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK075435|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AL832171|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##BC035350|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AY358977|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AB035130|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AB035131|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12	0.713898	CTCF.p2:11:0.714
chr12	118025611	118025725	reg1004903.p1	13.837	+	AK294435 AF446135 EU753241 U17327 AK307481 NM_000620 NM_001204218	-226160	-	AF446136 TSC_hg19_v1_chr12_-_117799037	-226647	-	NM_001204214	-278454	-	NM_173598	380359	-	NM_001130112 NM_001206801 NM_007370 NM_181578 TSC_hg19_v1_chr12_+_118454507 AK291107 AK094575 AK290685 BC001866 BC013961 AB208992 BC020440 L07540 AB464140 CU674898 CR407651	428900	+	AK310892 TSC_hg19_v1_chr12_-_118498977 BC015887 AK298513 AF229181 NM_018639	473267	-	AK294435|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446135|NOS1|4842|nitric oxide synthase 1 (neuronal)##EU753241|NOS1|4842|nitric oxide synthase 1 (neuronal)##U17327|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK307481|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_000620|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204218|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446136|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_173598|KSR2|283455|kinase suppressor of ras 2##NM_001130112|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_001206801|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_007370|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_181578|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK291107|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK094575|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK290685|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC001866|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC013961|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AB208992|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC020440|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##L07540|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##CR407651|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK310892|WSB2|55884|WD repeat and SOCS box containing 2##BC015887|WSB2|55884|WD repeat and SOCS box containing 2##AK298513|WSB2|55884|WD repeat and SOCS box containing 2##AF229181|WSB2|55884|WD repeat and SOCS box containing 2##NM_018639|WSB2|55884|WD repeat and SOCS box containing 2	0.950339	CTCF.p2:5:0.950
chr15	91191433	91191548	reg1002828.p1	13.837	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-118294	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-259951	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-259984	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	69124	+	NM_002569 X17094	220394	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	236211	+	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene	0.94811	CTCF.p2:-18:0.948
chr18	11995511	11995629	reg1002500.p1	13.837	+	TSC_hg19_v1_chr18_+_11981575 BC017176 AF200432 BT007061	-13960	+	TSC_hg19_v1_chr18_+_11981502 BC031560	-14071	+	TSC_hg19_v1_chr18_+_11981424 AF014398 NM_014214	-14141	+	NM_001279 AK122762 AF041378 AY364639	258779	+	TSC_hg19_v1_chr18_+_12308239 AK001295 AK092677 AK311364	312668	+	TSC_hg19_v1_chr18_+_12308246 AK022340 AK098440 AK304616 BC002654 NM_032525 AK298196 BC039717 AB590145 DQ893486 DQ896394	312695	+	BC017176|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##AF200432|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BT007061|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BC031560|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##AF014398|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##NM_014214|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##NM_001279|CIDEA|1149|cell death-inducing DFFA-like effector a##AK122762|CIDEA|1149|cell death-inducing DFFA-like effector a##AF041378|CIDEA|1149|cell death-inducing DFFA-like effector a##AY364639|CIDEA|1149|cell death-inducing DFFA-like effector a##AK001295|TUBB6|84617|tubulin, beta 6 class V##AK092677|TUBB6|84617|tubulin, beta 6 class V##AK311364|TUBB6|84617|tubulin, beta 6 class V##AK022340|TUBB6|84617|tubulin, beta 6 class V##AK098440|TUBB6|84617|tubulin, beta 6 class V##AK304616|TUBB6|84617|tubulin, beta 6 class V##BC002654|TUBB6|84617|tubulin, beta 6 class V##NM_032525|TUBB6|84617|tubulin, beta 6 class V##AK298196|TUBB6|84617|tubulin, beta 6 class V##DQ893486|TUBB6|84617|tubulin, beta 6 class V##DQ896394|TUBB6|84617|tubulin, beta 6 class V	0.021485	
chr16	2551292	2551431	reg1005644.p1	13.836	+	TSC_hg19_v1_chr16_+_2525149 BC112389 NM_001199107 NM_020705 AB032997	-26230	+	NM_006181 U86759	-29862	+	AK128408 TSC_hg19_v1_chr16_+_2510099 NM_025108 AK093788 AK301929 AX748307 BC018719 AK023971	-41249	+	TSC_hg19_v1_chr16_+_2563709 NM_001198569 M62762 NM_001694	12423	+	TSC_hg19_v1_chr16_+_2563952 BC009290	12584	+	TSC_hg19_v1_chr16_+_2563977 BC007389 BC004537	12620	+	BC112389|TBC1D24|57465|TBC1 domain family, member 24##NM_001199107|TBC1D24|57465|TBC1 domain family, member 24##NM_020705|TBC1D24|57465|TBC1 domain family, member 24##AB032997|TBC1D24|57465|TBC1 domain family, member 24##NM_006181|NTN3|4917|netrin 3##U86759|NTN3|4917|netrin 3##AK128408|C16orf59|80178|chromosome 16 open reading frame 59##NM_025108|C16orf59|80178|chromosome 16 open reading frame 59##AK093788|C16orf59|80178|chromosome 16 open reading frame 59##AK301929|C16orf59|80178|chromosome 16 open reading frame 59##BC018719|C16orf59|80178|chromosome 16 open reading frame 59##AK023971|C16orf59|80178|chromosome 16 open reading frame 59##NM_001198569|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##M62762|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##NM_001694|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##BC009290|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##BC007389|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##BC004537|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	0.999108	CTCF.p2:14:0.999
chr6	13332125	13332273	reg1005340.p1	13.836	+	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	-3499	-	AK091836 AX747210 NM_001242698	-36382	-	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-615156	+	AK027010 NM_001242630	76169	-	AK055131 AF264036 NM_001242628	154199	-	TSC_hg19_v1_chr6_-_13487051 BC148295 BC119005 BC124557	154898	-	AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AK055131|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF264036|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242628|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC148295|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC119005|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC124557|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.998348	CTCF.p2:4:0.998
chr1	156659405	156659541	reg1004588.p2	13.835	+	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	-12328	-	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	-47519	+	TSC_hg19_v1_chr1_+_156611723 AY358372 NM_021948 NM_198427	-47744	+	BT019827 CR450357 DQ892265 DQ896851 M68867 BC001109 AB593017 AK312007 TSC_hg19_v1_chr1_-_156675376 NM_001878 NM_001199723	15949	-	AY391837 AK022733 NM_030980	38195	-	TSC_hg19_v1_chr1_-_156698238 BC000575 AK095697	38754	-	BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##AY358372|BCAN|63827|brevican##NM_021948|BCAN|63827|brevican##NM_198427|BCAN|63827|brevican##BT019827|CRABP2|1382|cellular retinoic acid binding protein 2##CR450357|CRABP2|1382|cellular retinoic acid binding protein 2##DQ892265|CRABP2|1382|cellular retinoic acid binding protein 2##DQ896851|CRABP2|1382|cellular retinoic acid binding protein 2##M68867|CRABP2|1382|cellular retinoic acid binding protein 2##BC001109|CRABP2|1382|cellular retinoic acid binding protein 2##AB593017|CRABP2|1382|cellular retinoic acid binding protein 2##AK312007|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001878|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001199723|CRABP2|1382|cellular retinoic acid binding protein 2##AY391837|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK022733|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_030980|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##BC000575|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK095697|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2	0.975286	CTCF.p2:-4:0.975
chr8	134215261	134215382	reg1003208.p2	13.834	+	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-11991	+	NM_001045556 NM_001045557	-100012	-	AJ238591 TSC_hg19_v1_chr8_-_134087273 AK310108 AK310115	-128049	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	94176	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	368776	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1493473	-	AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##AJ238591|SLA|6503|Src-like-adaptor##AK310108|SLA|6503|Src-like-adaptor##AK310115|SLA|6503|Src-like-adaptor##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.986625	CTCF.p2:0:0.987
chr1	180221882	180222017	reg1004941.p1	13.833	+	NM_033343 AF179849	-22513	+	TSC_hg19_v1_chr1_+_180124047 AB384905	-97893	+	AF361868 TSC_hg19_v1_chr1_+_180124032 L42379	-97917	+	TSC_hg19_v1_chr1_-_180471976 AK314112 NM_032360	250015	-	TSC_hg19_v1_chr1_+_180601151 BC028576 NM_001135669 NM_004736	379188	+	AK309750 TSC_hg19_v1_chr1_+_180601157	379210	+	NM_033343|LHX4|89884|LIM homeobox 4##AF179849|LHX4|89884|LIM homeobox 4##AF361868|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##L42379|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##AK314112|ACBD6|84320|acyl-CoA binding domain containing 6##NM_032360|ACBD6|84320|acyl-CoA binding domain containing 6##BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AK309750|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	0.676221	CTCF.p2:0:0.652
chr1	115681655	115681781	reg1003197.p1	13.832	+	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	-49602	-	NM_000549	-109304	+	NM_003176 BC026162 AK315268 AF273043 BC105299 BC126266 BC144019 BC144020 BC065190 X95654	-284206	+	BC032517 NM_002506 X52599	199135	-	NM_001172411 NM_138959 BC065272 AF481859	502874	+	AB057596 NM_001172412	503531	+	AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##NM_000549|TSHB|7252|thyroid stimulating hormone, beta##NM_003176|SYCP1|6847|synaptonemal complex protein 1##BC026162|SYCP1|6847|synaptonemal complex protein 1##AK315268|SYCP1|6847|synaptonemal complex protein 1##AF273043|SYCP1|6847|synaptonemal complex protein 1##BC105299|SYCP1|6847|synaptonemal complex protein 1##BC126266|SYCP1|6847|synaptonemal complex protein 1##BC144019|SYCP1|6847|synaptonemal complex protein 1##BC144020|SYCP1|6847|synaptonemal complex protein 1##BC065190|SYCP1|6847|synaptonemal complex protein 1##X95654|SYCP1|6847|synaptonemal complex protein 1##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)	0.936571	CTCF.p2:-20:0.937
chr5	93860689	93860824	reg1004682.p1	13.832	+	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	-413436	-	CU688688 EU446850 BC029532 AB527965 AK098546 NM_153216	-783504	-	AK309742 TSC_hg19_v1_chr5_-_92957232	-903545	-	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	93501	-	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	93617	+	AK025997 TSC_hg19_v1_chr5_-_94224607	363850	-	AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##EU446850|POU5F2|134187|POU domain class 5, transcription factor 2##BC029532|POU5F2|134187|POU domain class 5, transcription factor 2##AK098546|POU5F2|134187|POU domain class 5, transcription factor 2##NM_153216|POU5F2|134187|POU domain class 5, transcription factor 2##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1	1.461345	CTCF.p2:-2:0.945	CTCF.p2:-39:0.474
chr19	49346075	49346208	reg1005196.p1	13.831	+	TSC_hg19_v1_chr19_-_49339923 NM_016246	-6218	-	AB528622 CU675337 TSC_hg19_v1_chr19_-_49339769 BC006283 BC006294 AK307437 AF126781	-6367	-	AK310243 U68418 CU674922 DQ892350 DQ895554 AF268047 AF268048 TSC_hg19_v1_chr19_-_49314287 BC001900 AK093627 AK309428 AK223522 AK310101 AK314548 NM_001164773 NM_001190	-31893	-	BC064601 AB208908 BC025259 AY007233 BC024157 NM_001161354 NM_020904	25655	-	TSC_hg19_v1_chr19_+_49375674 NM_014330	29515	+	AK001361 AK225632 AK296668 AK297615 AK298765 AK311366 TSC_hg19_v1_chr19_+_49375677	29536	+	NM_016246|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##BC006283|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##BC006294|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AK307437|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AF126781|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AK310243|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##U68418|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##DQ892350|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##DQ895554|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AF268047|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AF268048|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##BC001900|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK093627|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK309428|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK223522|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK310101|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK314548|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##NM_001164773|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##NM_001190|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##BC064601|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##AB208908|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##BC025259|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##AY007233|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##BC024157|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##NM_001161354|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##NM_020904|PLEKHA4|57664|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4##NM_014330|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK001361|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK225632|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK296668|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK297615|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK298765|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A	1.030114	CTCF.p2:5:1.000
chr20	30311762	30311895	reg1004353.p1	13.831	+	TSC_hg19_v1_chr20_-_30311772 BX647525	-88	-	TSC_hg19_v1_chr20_-_30310672 AY263336 BC019307 NM_001191 NM_138578 AK290968 AY263335 CR936637	-1162	-	BC032024 TSC_hg19_v1_chr20_-_30288101	-23731	-	NM_012112 TSC_hg19_v1_chr20_+_30327092 AK312549 AB024704 AF098158 AF287265 BC020207 BC004136	15209	+	AJ272502 BC092413 NM_033118 BX647635	95356	+	AF042831 BT009768 AB464535 DQ896105 EU176391 BC013408 NM_004118	121541	-	BX647525|BCL2L1|598|BCL2-like 1##AY263336|BCL2L1|598|BCL2-like 1##BC019307|BCL2L1|598|BCL2-like 1##NM_001191|BCL2L1|598|BCL2-like 1##NM_138578|BCL2L1|598|BCL2-like 1##AK290968|BCL2L1|598|BCL2-like 1##AY263335|BCL2L1|598|BCL2-like 1##CR936637|BCL2L1|598|BCL2-like 1##NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AJ272502|MYLK2|85366|myosin light chain kinase 2##BC092413|MYLK2|85366|myosin light chain kinase 2##NM_033118|MYLK2|85366|myosin light chain kinase 2##BX647635|MYLK2|85366|myosin light chain kinase 2##AF042831|FOXS1|2307|forkhead box S1##BT009768|FOXS1|2307|forkhead box S1##DQ896105|FOXS1|2307|forkhead box S1##EU176391|FOXS1|2307|forkhead box S1##BC013408|FOXS1|2307|forkhead box S1##NM_004118|FOXS1|2307|forkhead box S1	0.527878	CTCF.p2:15:0.528
chr9	129467664	129467787	reg1004681.p1	13.831	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	-90964	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-378558	+	AK309713 NM_001134778	-957248	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	99585	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	155219	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	209379	+	NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	0.886259	CTCF.p2:-9:0.886
chr11	123382074	123382212	reg1004944.p1	13.829	+	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	-316138	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	-316241	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	-449264	-	TSC_hg19_v1_chr11_+_123396366 AK127457	14212	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	14361	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	48830	+	AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AK127457|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B	0.396976	CTCF.p2:-12:0.397
chr21	44596846	44596968	reg1002503.p1	13.829	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-7733	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-69223	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-69282	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	249082	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	250088	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	482455	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.999847	CTCF.p2:-11:1.000
chr2	85618501	85618620	reg1004062.p1	13.828	+	TSC_hg19_v1_chr2_+_85581891 NM_001135021 NM_001135022 NM_001135023 NM_032213 BC054504 BC112324 AK307252 BC010991 BC001942 BC018666	-36663	+	TSC_hg19_v1_chr2_-_85581652 EU831583 EU831668 AL833237 AY358568 BC068517 AK296522 AK075261 NM_017750	-36869	-	TSC_hg19_v1_chr2_-_85555373 BX640868 NM_001206840 NM_001206841 NM_001206844 NM_006464	-63172	-	BC000728 M94345 TSC_hg19_v1_chr2_-_85637473 BC014549	18917	-	TSC_hg19_v1_chr2_-_85637490 AK225374 AK225378 NM_001747 AK130130	19092	-	TSC_hg19_v1_chr2_-_85641140 AK313898 AK300507	22576	-	NM_001135021|ELMOD3|84173|ELMO/CED-12 domain containing 3##NM_001135022|ELMOD3|84173|ELMO/CED-12 domain containing 3##NM_001135023|ELMOD3|84173|ELMO/CED-12 domain containing 3##NM_032213|ELMOD3|84173|ELMO/CED-12 domain containing 3##BC054504|ELMOD3|84173|ELMO/CED-12 domain containing 3##BC112324|ELMOD3|84173|ELMO/CED-12 domain containing 3##AK307252|ELMOD3|84173|ELMO/CED-12 domain containing 3##BC010991|ELMOD3|84173|ELMO/CED-12 domain containing 3##BC001942|ELMOD3|84173|ELMO/CED-12 domain containing 3##BC018666|ELMOD3|84173|ELMO/CED-12 domain containing 3##EU831583|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##EU831668|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##AL833237|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##AY358568|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##BC068517|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##AK296522|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##AK075261|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##NM_017750|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##BX640868|TGOLN2|10618|trans-golgi network protein 2##NM_001206840|TGOLN2|10618|trans-golgi network protein 2##NM_001206841|TGOLN2|10618|trans-golgi network protein 2##NM_001206844|TGOLN2|10618|trans-golgi network protein 2##NM_006464|TGOLN2|10618|trans-golgi network protein 2##BC000728|CAPG|822|capping protein (actin filament), gelsolin-like##M94345|CAPG|822|capping protein (actin filament), gelsolin-like##BC014549|CAPG|822|capping protein (actin filament), gelsolin-like##AK225374|CAPG|822|capping protein (actin filament), gelsolin-like##AK225378|CAPG|822|capping protein (actin filament), gelsolin-like##NM_001747|CAPG|822|capping protein (actin filament), gelsolin-like##AK130130|CAPG|822|capping protein (actin filament), gelsolin-like##AK313898|CAPG|822|capping protein (actin filament), gelsolin-like##AK300507|CAPG|822|capping protein (actin filament), gelsolin-like	0.875638	CTCF.p2:-10:0.876
chr5	52391879	52392008	reg1005013.p1	13.828	+	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	-106823	+	AK025729 BC007650 TSC_hg19_v1_chr5_+_52095991 BC005889 BC007249 AF132951 AK312633 AF139828 BC022789	-295957	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	-307954	+	BC046097 AF155659 NM_004531	13362	-	TSC_hg19_v1_chr5_-_52405588 BC029287 AF091871 AF117815 AK312887 NM_176806 BC095417	13653	-	NM_006350 NM_013409 TSC_hg19_v1_chr5_+_52776278	384334	+	NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK025729|PELO|53918|pelota homolog (Drosophila)##BC007650|PELO|53918|pelota homolog (Drosophila)##BC005889|PELO|53918|pelota homolog (Drosophila)##BC007249|PELO|53918|pelota homolog (Drosophila)##AF132951|PELO|53918|pelota homolog (Drosophila)##AK312633|PELO|53918|pelota homolog (Drosophila)##AF139828|PELO|53918|pelota homolog (Drosophila)##BC022789|PELO|53918|pelota homolog (Drosophila)##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1##BC046097|MOCS2|4338|molybdenum cofactor synthesis 2##AF155659|MOCS2|4338|molybdenum cofactor synthesis 2##NM_004531|MOCS2|4338|molybdenum cofactor synthesis 2##BC029287|MOCS2|4338|molybdenum cofactor synthesis 2##AF091871|MOCS2|4338|molybdenum cofactor synthesis 2##AF117815|MOCS2|4338|molybdenum cofactor synthesis 2##AK312887|MOCS2|4338|molybdenum cofactor synthesis 2##NM_176806|MOCS2|4338|molybdenum cofactor synthesis 2##BC095417|MOCS2|4338|molybdenum cofactor synthesis 2##NM_006350|FST|10468|follistatin##NM_013409|FST|10468|follistatin	0.99936	CTCF.p2:11:0.999
chr13	98011831	98011970	reg1004569.p1	13.827	+	TSC_hg19_v1_chr13_+_97999294 AF339832	-12606	+	AY101770 AK304699 EU446757 TSC_hg19_v1_chr13_+_97928510	-83434	+	BC020430 TSC_hg19_v1_chr13_+_97928308	-83648	+	TSC_hg19_v1_chr13_+_98086350 AK315139 NM_021033 BC041333	74537	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	74802	+	NM_002271 BC045640	594037	+	AY101770|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK304699|MBNL2|10150|muscleblind-like 2 (Drosophila)##EU446757|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC020430|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK315139|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_021033|RAP2A|5911|RAP2A, member of RAS oncogene family##BC041333|RAP2A|5911|RAP2A, member of RAS oncogene family##AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_002271|IPO5|3843|importin 5##BC045640|IPO5|3843|importin 5	0.991968	CTCF.p2:7:0.992
chr20	37522545	37522656	reg1002353.p4	13.827	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	-88246	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	-145488	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-169441	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	32389	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	32468	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	68389	+	AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35	0.998542	CTCF.p2:29:0.999
chr9	86930303	86930450	reg1002923.p2	13.827	+	NM_024945 TSC_hg19_v1_chr9_+_86595689 BC039999 BC020606 AK022950 BC044571 BC053549 BC032494	-334667	+	TSC_hg19_v1_chr9_-_86595531 BC014980 AK291336 X72727 NM_002140 NM_031262	-334837	-	TSC_hg19_v1_chr9_-_86595168 NM_031263	-335201	-	BC093821 BC093823 AK310861 AK304406 AK314039 AK292849 NM_001199633	25258	-	AF305210 NM_022127	53036	-	TSC_hg19_v1_chr9_+_87283453 BC075804 NM_001018064 NM_006180 AB209118	353085	+	NM_024945|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC039999|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC020606|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##AK022950|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC044571|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC053549|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC032494|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC014980|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##AK291336|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##X72727|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_002140|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_031262|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_031263|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##BC093821|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093823|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK310861|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK304406|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK314039|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK292849|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_001199633|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AF305210|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_022127|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC075804|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018064|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_006180|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB209118|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	0.999131	CTCF.p2:0:0.982
chrX	4465388	4465528	reg1003468.p1	13.827	+	TSC_hg19_v1_chrX_-_3631668 NM_005044	-833740	-	TSC_hg19_v1_chrX_-_3631645 X85545	-833813	-	TSC_hg19_v1_chrX_-_3631619 BC041073	-833916	-	AB033086 AF376803 AX773938 NM_020742	1680429	-	AK055471 BC034018 NM_181332	1681222	-	AF167078 AF167079 NM_016379	1987700	-	NM_005044|PRKX|5613|protein kinase, X-linked##X85545|PRKX|5613|protein kinase, X-linked##BC041073|PRKX|5613|protein kinase, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A	1.011497	CTCF.p2:13:0.999
chr2	111334766	111334892	reg1004329.p1	13.826	+	NM_005054 U64675	-152	-	BC094740 NM_001205288 NM_033514	-104178	-	TSC_hg19_v1_chr2_-_110970123 BC031315	-364708	-	AL136868 NM_001037866 NM_001123363 NM_032260	1479	-	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	100814	-	TSC_hg19_v1_chr2_+_111435820 BC040607	100993	+	NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##BC031315|LINC00116|205251|long intergenic non-protein coding RNA 116##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)	0.033659	
chr9	94896320	94896446	reg1003650.p2	13.826	+	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	-18719	-	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	-183994	-	TSC_hg19_v1_chr9_-_94711095 BC033697	-185255	-	TSC_hg19_v1_chr9_-_95055945 AB209234 D28473 AK293014	159555	-	U04953 TSC_hg19_v1_chr9_-_95055976 BX647236 AK308202 BX647430 NM_013417 BX537417 BX537429 BX538109 BX647071 BX648567	159592	-	TSC_hg19_v1_chr9_-_95055986 AK301272	159603	-	AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##AB209234|IARS|3376|isoleucyl-tRNA synthetase##D28473|IARS|3376|isoleucyl-tRNA synthetase##AK293014|IARS|3376|isoleucyl-tRNA synthetase##U04953|IARS|3376|isoleucyl-tRNA synthetase##BX647236|IARS|3376|isoleucyl-tRNA synthetase##AK308202|IARS|3376|isoleucyl-tRNA synthetase##BX647430|IARS|3376|isoleucyl-tRNA synthetase##NM_013417|IARS|3376|isoleucyl-tRNA synthetase##BX537417|IARS|3376|isoleucyl-tRNA synthetase##BX537429|IARS|3376|isoleucyl-tRNA synthetase##BX538109|IARS|3376|isoleucyl-tRNA synthetase##BX647071|IARS|3376|isoleucyl-tRNA synthetase##BX648567|IARS|3376|isoleucyl-tRNA synthetase##AK301272|IARS|3376|isoleucyl-tRNA synthetase	0.997798	CTCF.p2:-1:0.998
chr12	66501283	66501444	reg1003734.p2	13.825	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	-282350	+	TSC_hg19_v1_chr12_+_66218605 AK311399	-282756	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	-283156	+	TSC_hg19_v1_chr12_-_66524536 BC070232 BC006002 BC107780 AK091568 AX747065 NM_032338	23162	-	AB464309 TSC_hg19_v1_chr12_-_66563773 AF182414 AF161526 BC020613 AF113127 AK301359 AF182041 AK075069 AK225158 BC070366 BC052273 BC094852	62391	-	TSC_hg19_v1_chr12_-_66563806 BC004401 NM_016056	62439	-	AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##BC070232|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC006002|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC107780|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AK091568|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##NM_032338|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AF182414|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF161526|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC020613|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF113127|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF182041|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK075069|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK225158|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC070366|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC052273|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC094852|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC004401|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##NM_016056|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4	0.999698	CTCF.p2:5:1.000
chr22	38448426	38448556	reg1002436.p1	13.824	+	TSC_hg19_v1_chr22_+_38382170 AK098727	-66319	+	BC007595 NM_006941 TSC_hg19_v1_chr22_-_38380551 AK310896 AK300945	-67938	-	CR456584 TSC_hg19_v1_chr22_-_38379898 BC002824	-68592	-	AK092818 AX747747 NM_001039583 NM_001039584 NM_012407 AK308792 TSC_hg19_v1_chr22_+_38453410 AK299684 AK310629 AK000875 AK222640 AL049654 BC017561 AB026491	4868	+	TSC_hg19_v1_chr22_+_38453478 CR456550	5020	+	AF132610 NM_013356	30667	-	AK098727|LOC100131530|100131530|uncharacterized LOC100131530##BC007595|SOX10|6663|SRY (sex determining region Y)-box 10##NM_006941|SOX10|6663|SRY (sex determining region Y)-box 10##AK300945|SOX10|6663|SRY (sex determining region Y)-box 10##CR456584|SOX10|6663|SRY (sex determining region Y)-box 10##BC002824|SOX10|6663|SRY (sex determining region Y)-box 10##AK092818|PICK1|9463|protein interacting with PRKCA 1##NM_001039583|PICK1|9463|protein interacting with PRKCA 1##NM_001039584|PICK1|9463|protein interacting with PRKCA 1##NM_012407|PICK1|9463|protein interacting with PRKCA 1##AK308792|PICK1|9463|protein interacting with PRKCA 1##AK299684|PICK1|9463|protein interacting with PRKCA 1##AK310629|PICK1|9463|protein interacting with PRKCA 1##AK000875|PICK1|9463|protein interacting with PRKCA 1##AK222640|PICK1|9463|protein interacting with PRKCA 1##AL049654|PICK1|9463|protein interacting with PRKCA 1##BC017561|PICK1|9463|protein interacting with PRKCA 1##AB026491|PICK1|9463|protein interacting with PRKCA 1##CR456550|PICK1|9463|protein interacting with PRKCA 1##AF132610|SLC16A8|23539|solute carrier family 16, member 8 (monocarboxylic acid transporter 3)##NM_013356|SLC16A8|23539|solute carrier family 16, member 8 (monocarboxylic acid transporter 3)	1.852057	CTCF.p2:10:0.998	CTCF.p2:-73:0.854
chr20	626247	626390	reg1005042.p1	13.823	+	NM_004609 U08336 TSC_hg19_v1_chr20_-_590953 BC067836	-35380	-	TSC_hg19_v1_chr20_-_524377 DQ354583 BC011668 M55265 BC002615 J02853 S53149 BC050036 AK302583 AK312535 AY735339 NM_001895 NM_177559 NM_177560	-101910	-	TSC_hg19_v1_chr20_-_443178 AK095110 NM_144628 AK127062	-183103	-	BC017001 TSC_hg19_v1_chr20_-_633843 AM393140 AM393844 BC047707 BC032604 AK312054	7507	-	TSC_hg19_v1_chr20_-_633845 AK127435 AL833944 NM_080725	7548	-	AK125343 TSC_hg19_v1_chr20_-_656445	30127	-	NM_004609|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##U08336|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##BC067836|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##DQ354583|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##BC011668|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##M55265|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##BC002615|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##J02853|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##S53149|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##BC050036|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AK302583|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AK312535|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AY735339|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_001895|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_177559|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_177560|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AK095110|TBC1D20|128637|TBC1 domain family, member 20##NM_144628|TBC1D20|128637|TBC1 domain family, member 20##AK127062|TBC1D20|128637|TBC1 domain family, member 20##BC017001|SRXN1|140809|sulfiredoxin 1##AM393140|SRXN1|140809|sulfiredoxin 1##AM393844|SRXN1|140809|sulfiredoxin 1##BC047707|SRXN1|140809|sulfiredoxin 1##BC032604|SRXN1|140809|sulfiredoxin 1##AK312054|SRXN1|140809|sulfiredoxin 1##AK127435|SRXN1|140809|sulfiredoxin 1##AL833944|SRXN1|140809|sulfiredoxin 1##NM_080725|SRXN1|140809|sulfiredoxin 1	0.559726	CTCF.p2:4:0.560
chr8	144594887	144594989	reg1002583.p1	13.823	+	NM_201589	-82337	-	TSC_hg19_v1_chr8_+_144451016 NM_052924 BC012135 BC025767 AB528055 AY082588 CU693058 AB067516	-143848	+	AF349017 NM_052963 TSC_hg19_v1_chr8_-_144417051	-177883	-	D63484 TSC_hg19_v1_chr8_-_144623602 BC038670	28653	-	TSC_hg19_v1_chr8_-_144623640 NM_015117	28694	-	AK291817 NM_001166237	40618	+	NM_201589|MAFA|389692|v-maf musculoaponeurotic fibrosarcoma oncogene homolog A (avian)##NM_052924|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC012135|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC025767|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AY082588|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AB067516|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AF349017|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_052963|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##D63484|ZC3H3|23144|zinc finger CCCH-type containing 3##BC038670|ZC3H3|23144|zinc finger CCCH-type containing 3##NM_015117|ZC3H3|23144|zinc finger CCCH-type containing 3##AK291817|GSDMD|79792|gasdermin D##NM_001166237|GSDMD|79792|gasdermin D	0.988132	CTCF.p2:2:0.988
chr19	51842099	51842235	reg1004768.p1	13.822	+	TSC_hg19_v1_chr19_+_51815095 NM_001101372	-27069	+	AK097554 NM_173635	-81204	+	BC028152 AK304810 TSC_hg19_v1_chr19_+_51728370 AB590304 DQ891726 DQ894903	-113796	+	BC131493 NM_001163922	3210	-	TSC_hg19_v1_chr19_-_51858044 AF370381 AK055285 NM_001014763	15901	-	CR456827 TSC_hg19_v1_chr19_-_51869602 AK291881 BC093963 BC093961 X71129	27433	-	NM_001101372|IGLON5|402665|IgLON family member 5##AK097554|C19orf75|284369|chromosome 19 open reading frame 75##NM_173635|C19orf75|284369|chromosome 19 open reading frame 75##BC028152|CD33|945|CD33 molecule##AK304810|CD33|945|CD33 molecule##DQ891726|CD33|945|CD33 molecule##DQ894903|CD33|945|CD33 molecule##BC131493|VSIG10L|147645|V-set and immunoglobulin domain containing 10 like##NM_001163922|VSIG10L|147645|V-set and immunoglobulin domain containing 10 like##AF370381|ETFB|2109|electron-transfer-flavoprotein, beta polypeptide##AK055285|ETFB|2109|electron-transfer-flavoprotein, beta polypeptide##NM_001014763|ETFB|2109|electron-transfer-flavoprotein, beta polypeptide##CR456827|ETFB|2109|electron-transfer-flavoprotein, beta polypeptide##AK291881|ETFB|2109|electron-transfer-flavoprotein, beta polypeptide##BC093963|ETFB|2109|electron-transfer-flavoprotein, beta polypeptide##BC093961|ETFB|2109|electron-transfer-flavoprotein, beta polypeptide##X71129|ETFB|2109|electron-transfer-flavoprotein, beta polypeptide	0.995421	CTCF.p2:8:0.995
chr2	232466464	232466587	reg1004477.p1	13.822	+	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	-8908	+	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	-71371	-	BC033054 TSC_hg19_v1_chr2_-_232379076	-87443	-	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	106709	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	106807	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	179400	-	NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta	0.992027	CTCF.p2:2:0.992
chr18	60251681	60251812	reg1004935.p1	13.819	+	NM_017742 TSC_hg19_v1_chr18_+_60190696 BC006340	-60992	+	AB209762 AF018253 NM_003839 AB527346	-259196	+	TSC_hg19_v1_chr18_+_59855176 AB384606	-396536	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	130918	+	TSC_hg19_v1_chr18_+_60383911 AB011178	132180	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	132562	+	NM_017742|ZCCHC2|54877|zinc finger, CCHC domain containing 2##BC006340|ZCCHC2|54877|zinc finger, CCHC domain containing 2##AB209762|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##AF018253|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_003839|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1	0.969222	CTCF.p2:11:0.969
chr2	68589251	68589374	reg1003656.p1	13.819	+	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	-42212	-	TSC_hg19_v1_chr2_-_68479665 AK307136 AK314893 BC027913 NM_000945	-109717	-	TSC_hg19_v1_chr2_+_68384999 BC008304 NM_020143 AK291715 AF349314 AF164799 AK313204 AK223118 L48692 AK225641 BC018152	-204215	+	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	3060	+	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	3145	+	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	105098	-	NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC008304|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_020143|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK291715|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF349314|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF164799|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK313204|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK223118|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK225641|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##BC018152|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin##DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48	0.989271	CTCF.p2:-8:0.989
chr1	62973977	62974105	reg1005245.p1	13.818	+	TSC_hg19_v1_chr1_+_62902747 BC032364 AB208893 AF117386 AB014458	-71154	+	TSC_hg19_v1_chr1_+_62902719 AK312423 BC011881	-71322	+	TSC_hg19_v1_chr1_+_62902702 BC050525	-71363	+	NM_014495 AK315304 TSC_hg19_v1_chr1_+_63063190 AK289426 BC007059 BC058287 AY358273 AF152562 AB590604 CU691298	89170	+	DQ341187 TSC_hg19_v1_chr1_-_63154045 AK055401 NM_033407 AK292640	180086	-	TSC_hg19_v1_chr1_+_63249807 NM_032852 NM_178221 AK027773 BC018678 BC033024 BC008395	275772	+	BC032364|USP1|7398|ubiquitin specific peptidase 1##AB208893|USP1|7398|ubiquitin specific peptidase 1##AF117386|USP1|7398|ubiquitin specific peptidase 1##AB014458|USP1|7398|ubiquitin specific peptidase 1##AK312423|USP1|7398|ubiquitin specific peptidase 1##BC011881|USP1|7398|ubiquitin specific peptidase 1##BC050525|USP1|7398|ubiquitin specific peptidase 1##NM_014495|ANGPTL3|27329|angiopoietin-like 3##AK315304|ANGPTL3|27329|angiopoietin-like 3##AK289426|ANGPTL3|27329|angiopoietin-like 3##BC007059|ANGPTL3|27329|angiopoietin-like 3##BC058287|ANGPTL3|27329|angiopoietin-like 3##AY358273|ANGPTL3|27329|angiopoietin-like 3##AF152562|ANGPTL3|27329|angiopoietin-like 3##DQ341187|DOCK7|85440|dedicator of cytokinesis 7##AK055401|DOCK7|85440|dedicator of cytokinesis 7##NM_033407|DOCK7|85440|dedicator of cytokinesis 7##AK292640|DOCK7|85440|dedicator of cytokinesis 7##NM_032852|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_178221|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##AK027773|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC018678|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC033024|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC008395|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)	0.934774	CTCF.p2:-9:0.935
chr21	44923402	44923509	reg1002487.p1	13.818	+	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	-76460	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	-77466	-	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-334281	+	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	155907	-	TSC_hg19_v1_chr21_+_45079444 BC028386 NM_015056 BC014005 AK056263 D80001 AB385292	156003	+	TSC_hg19_v1_chr21_+_45138985 BC005825 NM_003681	215524	+	AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein##BC028386|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##NM_015056|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##BC014005|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##AK056263|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##D80001|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##BC005825|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase##NM_003681|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase	0.202299	CTCF.p2:16:0.202
chr12	58026955	58027072	reg1003809.p1	13.817	+	TSC_hg19_v1_chr12_-_58026955 AB209460 AK289690 BC029828 NM_001478 AK299845	-69	-	M83651 TSC_hg19_v1_chr12_-_58026719	-348	-	AK293432 TSC_hg19_v1_chr12_-_58026433 AK302503	-568	-	NM_001017956 NM_001017957 NM_001017958 NM_006812 AK303291 AK291374 TSC_hg19_v1_chr12_+_58087929 AB002806 AK129781 AK293435 AK294870 AK130733 AK296770 AK298532 AK303858 AK304533 BC000532 BC007254 BC023513 AB590116 CR456791 CU674262 CU675585 DQ892759 DQ896004	60827	+	TSC_hg19_v1_chr12_+_58120054 AK301303 BC069024 BC098453 BC039697 BC019026	93055	+	AY128689 NM_001122772	105015	-	AB209460|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK289690|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##BC029828|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##NM_001478|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK299845|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##M83651|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK293432|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK302503|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##NM_001017956|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##NM_001017957|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##NM_001017958|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##NM_006812|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK303291|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK291374|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AB002806|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK129781|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK293435|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK294870|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK130733|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK296770|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK298532|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK303858|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK304533|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##BC000532|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##BC007254|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##BC023513|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##CR456791|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##DQ892759|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##DQ896004|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK301303|LOC100130776|100130776|uncharacterized LOC100130776##BC069024|LOC100130776|100130776|uncharacterized LOC100130776##BC039697|LOC100130776|100130776|uncharacterized LOC100130776##BC019026|LOC100130776|100130776|uncharacterized LOC100130776##AY128689|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##NM_001122772|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	0.86359	CTCF.p2:-10:0.864
chr19	38393371	38393504	reg1003396.p1	13.817	+	TSC_hg19_v1_chr19_+_38308124 AK092337	-85298	+	TSC_hg19_v1_chr19_+_38307973 AK309685	-85428	+	BC064962 AK074539 NM_001172689 NM_001172690 NM_001172691 NM_001172692 NM_152360	-123223	-	AK302913 AY026504 AK128826 NM_031951	3837	-	TSC_hg19_v1_chr19_+_38397847 NM_015073	4420	+	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	4475	+	AK092337|LOC644554|644554|uncharacterized LOC644554##AK309685|LOC644554|644554|uncharacterized LOC644554##BC064962|ZNF573|126231|zinc finger protein 573##AK074539|ZNF573|126231|zinc finger protein 573##NM_001172689|ZNF573|126231|zinc finger protein 573##NM_001172690|ZNF573|126231|zinc finger protein 573##NM_001172691|ZNF573|126231|zinc finger protein 573##NM_001172692|ZNF573|126231|zinc finger protein 573##NM_152360|ZNF573|126231|zinc finger protein 573##AK302913|WDR87|83889|WD repeat domain 87##AY026504|WDR87|83889|WD repeat domain 87##AK128826|WDR87|83889|WD repeat domain 87##NM_031951|WDR87|83889|WD repeat domain 87##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	0.955205	CTCF.p2:-19:0.955
chr2	103059821	103059949	reg1002680.p2	13.815	+	AK300026 AF077346 NM_003853	-24685	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	-80777	+	BC012580 BC030975 NM_003856 AK291578 AB029084	-106154	+	CR627411 NM_001011552	29876	+	BC136377 BC136378 BC035787 NM_003048 AF073299	176298	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	293448	-	AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein##AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein##NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1##BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##CR627411|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##NM_001011552|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##BC136377|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC136378|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC035787|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##NM_003048|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AF073299|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9	0.0	
chr17	43313146	43313264	reg1004306.p1	13.814	+	TSC_hg19_v1_chr17_+_43299284 AY278319 NM_005892 BC111564	-13845	+	AK056946 NM_144608	-74942	+	TSC_hg19_v1_chr17_+_43225936 BC006460	-87270	+	AK096807 TSC_hg19_v1_chr17_-_43319268	5991	-	TSC_hg19_v1_chr17_+_43325300 AK311429	12099	+	BC028124 AF433663 AK302184 AK058143 NM_152343	26250	-	AY278319|FMNL1|752|formin-like 1##NM_005892|FMNL1|752|formin-like 1##BC111564|FMNL1|752|formin-like 1##AK056946|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##NM_144608|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##BC006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK311429|LOC100133991|100133991|uncharacterized LOC100133991##BC028124|C17orf46|124783|chromosome 17 open reading frame 46##AF433663|C17orf46|124783|chromosome 17 open reading frame 46##AK302184|C17orf46|124783|chromosome 17 open reading frame 46##AK058143|C17orf46|124783|chromosome 17 open reading frame 46##NM_152343|C17orf46|124783|chromosome 17 open reading frame 46	0.997974	CTCF.p2:12:0.998
chr22	25631922	25632057	reg1004697.p1	13.814	+	NM_000496	-16378	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	-36145	+	TSC_hg19_v1_chr22_+_25591072 AK025418	-40860	+	AL137651 NM_182492	126534	-	BC139736 NM_001135772	145554	-	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	212087	+	NM_000496|CRYBB2|1415|crystallin, beta B2##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##AK025418|KIAA1671|85379|KIAA1671##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1	0.990018	CTCF.p2:-16:0.990
chr7	101245812	101245937	reg1004921.p1	13.813	+	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	-239657	+	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	-280836	-	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-350308	-	BC002778 NM_138403	26701	-	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	213335	+	M74099 NM_181552	215007	+	NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1	0.975143	CTCF.p2:-7:0.975
chr7	88176177	88176309	reg1004917.p1	13.813	+	BC020600 AF423422 AF423423 AK026806 AK307644 TSC_hg19_v1_chr7_-_87936207 NM_001205315 NM_001205316 NM_024636	-240029	-	TSC_hg19_v1_chr7_-_87856292 AK296601 NM_198901	-319949	-	TSC_hg19_v1_chr7_-_87849391 AK129770 AK310366 NM_003130	-326838	-	BC140826 BC140829 AK056672 AY295769 NM_181646	212473	+	BC028365 NM_152706	248787	-	NM_012449 TSC_hg19_v1_chr7_+_89783782 AK308452 BC011802	1607494	+	BC020600|STEAP4|79689|STEAP family member 4##AF423422|STEAP4|79689|STEAP family member 4##AF423423|STEAP4|79689|STEAP family member 4##AK026806|STEAP4|79689|STEAP family member 4##AK307644|STEAP4|79689|STEAP family member 4##NM_001205315|STEAP4|79689|STEAP family member 4##NM_001205316|STEAP4|79689|STEAP family member 4##NM_024636|STEAP4|79689|STEAP family member 4##AK296601|SRI|6717|sorcin##NM_198901|SRI|6717|sorcin##AK129770|SRI|6717|sorcin##AK310366|SRI|6717|sorcin##NM_003130|SRI|6717|sorcin##BC140826|ZNF804B|219578|zinc finger protein 804B##BC140829|ZNF804B|219578|zinc finger protein 804B##AK056672|ZNF804B|219578|zinc finger protein 804B##AY295769|ZNF804B|219578|zinc finger protein 804B##NM_181646|ZNF804B|219578|zinc finger protein 804B##BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62##NM_012449|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK308452|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC011802|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1	0.939688	CTCF.p2:-13:0.940
chr1	232771631	232771762	reg1005372.p1	13.811	+	BC006013 NM_020808 AY168879	-120427	-	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	-1009141	+	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	-1107265	+	TSC_hg19_v1_chr1_-_232878472 AK093200	106761	-	NM_019090 BC109122	169008	+	AK290216 TSC_hg19_v1_chr1_+_232941173 BC036663 AB037804	169455	+	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1##FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##NM_019090|KIAA1383|54627|KIAA1383##BC109122|KIAA1383|54627|KIAA1383##AK290216|KIAA1383|54627|KIAA1383##BC036663|KIAA1383|54627|KIAA1383##AB037804|KIAA1383|54627|KIAA1383	0.487832	CTCF.p2:0:0.488
chr11	87749742	87749855	reg1003622.p1	13.809	+	AK024853 TSC_hg19_v1_chr11_+_87032449	-717356	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	-1000820	+	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	-1083410	-	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	158794	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	321069	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	321104	-	AK024853|TMEM135|65084|transmembrane protein 135##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C	0.812146	CTCF.p2:-19:0.812
chr1	206807756	206807875	reg1004378.p1	13.809	+	TSC_hg19_v1_chr1_-_206785905 NM_001201478 NM_006893	-21932	-	DQ891590 DQ894784 TSC_hg19_v1_chr1_-_206785812 BC039134 BC058905 AK225259 BC001585 AF220417 AF262403 AK294536 AK001852	-22060	-	TSC_hg19_v1_chr1_+_206730897 CU692112 EU831661	-76918	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	1029	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	1295	+	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	50656	+	NM_001201478|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_006893|EIF2D|1939|eukaryotic translation initiation factor 2D##DQ891590|EIF2D|1939|eukaryotic translation initiation factor 2D##DQ894784|EIF2D|1939|eukaryotic translation initiation factor 2D##BC039134|EIF2D|1939|eukaryotic translation initiation factor 2D##BC058905|EIF2D|1939|eukaryotic translation initiation factor 2D##AK225259|EIF2D|1939|eukaryotic translation initiation factor 2D##BC001585|EIF2D|1939|eukaryotic translation initiation factor 2D##AF220417|EIF2D|1939|eukaryotic translation initiation factor 2D##AF262403|EIF2D|1939|eukaryotic translation initiation factor 2D##AK294536|EIF2D|1939|eukaryotic translation initiation factor 2D##AK001852|EIF2D|1939|eukaryotic translation initiation factor 2D##EU831661|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2	0.992596	CTCF.p2:-6:0.993
chr13	40186309	40186416	reg1004225.p1	13.808	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-9000	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-9035	-	AF098807 BC017824 TSC_hg19_v1_chr13_-_40177268	-9118	-	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	43499	+	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	1054350	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	1158930	-	NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##AF098807|LHFP|10186|lipoma HMGIC fusion partner##BC017824|LHFP|10186|lipoma HMGIC fusion partner##AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31	0.721876	CTCF.p2:2:0.722
chr17	37778326	37778424	reg1003225.p1	13.808	+	TSC_hg19_v1_chr17_-_37764168 BC022481 NM_006160	-14202	-	TSC_hg19_v1_chr17_+_37618267 AF227198 BC140854 AB462974	-160089	+	TSC_hg19_v1_chr17_+_37617760 NM_015083 NM_016507 AK302645	-160623	+	NM_032192 AF464196 TSC_hg19_v1_chr17_+_37783188	4809	+	TSC_hg19_v1_chr17_+_37783204 AK123112 AK127542 AK129537 AF435972	4834	+	AY070271 NM_001242464 NM_181505 AF435973 AF435974 AK024593 AK225058 BC001519	6386	+	BC022481|NEUROD2|4761|neurogenic differentiation 2##NM_006160|NEUROD2|4761|neurogenic differentiation 2##AF227198|CDK12|51755|cyclin-dependent kinase 12##BC140854|CDK12|51755|cyclin-dependent kinase 12##NM_015083|CDK12|51755|cyclin-dependent kinase 12##NM_016507|CDK12|51755|cyclin-dependent kinase 12##AK302645|CDK12|51755|cyclin-dependent kinase 12##NM_032192|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF464196|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK123112|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK127542|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK129537|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435972|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AY070271|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##NM_001242464|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##NM_181505|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435973|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435974|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK024593|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK225058|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##BC001519|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	1.959812	CTCF.p2:9:0.999	CTCF.p2:-37:0.960
chr6	24583772	24583905	reg1004504.p1	13.805	+	AK310289 NM_001252328	-384	-	TSC_hg19_v1_chr6_+_24495196 AK314357 BC034321 NM_001080 NM_170740 DQ891671 DQ894857 AJ427355 Y11192	-88643	+	TSC_hg19_v1_chr6_+_24495080 AK290800 AK294699 AK315380	-88760	+	AK296310 AK295008 AK307503 AK296426 BC140821 BC144628 NM_001168375 NM_001168376 TSC_hg19_v1_chr6_-_24646374 AB002317 BC152460 NM_001168374 NM_001168377 NM_014809	62330	-	AJ420495 TSC_hg19_v1_chr6_-_24667106 AK296623 AB587417 AK002168 EU446614 BC110375 AF223469 AJ269473 AF201687 BC017553 NM_016614 AK308836	83132	-	TSC_hg19_v1_chr6_-_24667128 AK298699	83384	-	AK310289|KIAA0319|9856|KIAA0319##NM_001252328|KIAA0319|9856|KIAA0319##AK314357|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##BC034321|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_001080|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_170740|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ891671|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ894857|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AJ427355|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##Y11192|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK290800|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK294699|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK315380|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK296310|KIAA0319|9856|KIAA0319##AK295008|KIAA0319|9856|KIAA0319##AK307503|KIAA0319|9856|KIAA0319##AK296426|KIAA0319|9856|KIAA0319##BC140821|KIAA0319|9856|KIAA0319##BC144628|KIAA0319|9856|KIAA0319##NM_001168375|KIAA0319|9856|KIAA0319##NM_001168376|KIAA0319|9856|KIAA0319##AB002317|KIAA0319|9856|KIAA0319##BC152460|KIAA0319|9856|KIAA0319##NM_001168374|KIAA0319|9856|KIAA0319##NM_001168377|KIAA0319|9856|KIAA0319##NM_014809|KIAA0319|9856|KIAA0319##AJ420495|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK296623|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK002168|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##EU446614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC110375|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF223469|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AJ269473|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF201687|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC017553|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##NM_016614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK308836|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK298699|TDP2|51567|tyrosyl-DNA phosphodiesterase 2	0.720732	CTCF.p2:-1:0.721
chr17_ctg5_hap1	78125	78249	reg1003438.p1	13.803	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999644	CTCF.p2:30:1.000
chr17	33446858	33447005	reg1005026.p1	13.802	+	TSC_hg19_v1_chr17_-_33446880 NM_001142571 NM_002878 NM_133629	-56	-	AB464124 DQ892318 DQ895520 BC002723 AB013341 AB016223 AB016224 AB016225 Y15572 AF034956 BC014422 TSC_hg19_v1_chr17_-_33446836 AK296241 BX647297 AK301249	-186	-	TSC_hg19_v1_chr17_-_33416298 AK093112 AX747930 BC028424	-30620	-	AK313775 NM_017559 BC024002 AK225743 AL133054 EU831600 EU831687	1723	+	AB209111 BC002884 TSC_hg19_v1_chr17_-_33469323 BC012075 AK303253 AK001320 AK304508 NM_001014445 NM_018096	22389	-	AK095929 BX647642 NM_001033576 NM_173167 AL832355 AL833281	27916	+	NM_001142571|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_002878|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_133629|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##DQ892318|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##DQ895520|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC002723|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB013341|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016223|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016224|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016225|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##Y15572|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AF034956|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC014422|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK296241|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BX647297|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK301249|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK093112|RFFL|117584|ring finger and FYVE-like domain containing 1##BC028424|RFFL|117584|ring finger and FYVE-like domain containing 1##AK313775|FNDC8|54752|fibronectin type III domain containing 8##NM_017559|FNDC8|54752|fibronectin type III domain containing 8##BC024002|FNDC8|54752|fibronectin type III domain containing 8##AK225743|FNDC8|54752|fibronectin type III domain containing 8##AL133054|FNDC8|54752|fibronectin type III domain containing 8##EU831600|FNDC8|54752|fibronectin type III domain containing 8##EU831687|FNDC8|54752|fibronectin type III domain containing 8##AB209111|NLE1|54475|notchless homolog 1 (Drosophila)##BC002884|NLE1|54475|notchless homolog 1 (Drosophila)##BC012075|NLE1|54475|notchless homolog 1 (Drosophila)##AK303253|NLE1|54475|notchless homolog 1 (Drosophila)##AK001320|NLE1|54475|notchless homolog 1 (Drosophila)##AK304508|NLE1|54475|notchless homolog 1 (Drosophila)##NM_001014445|NLE1|54475|notchless homolog 1 (Drosophila)##NM_018096|NLE1|54475|notchless homolog 1 (Drosophila)##AK095929|UNC45B|146862|unc-45 homolog B (C. elegans)##BX647642|UNC45B|146862|unc-45 homolog B (C. elegans)##NM_001033576|UNC45B|146862|unc-45 homolog B (C. elegans)##NM_173167|UNC45B|146862|unc-45 homolog B (C. elegans)##AL832355|UNC45B|146862|unc-45 homolog B (C. elegans)##AL833281|UNC45B|146862|unc-45 homolog B (C. elegans)	0.935755	CTCF.p2:-5:0.936
chr9	119499464	119499599	reg1004462.p1	13.801	+	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	-49925	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	-50069	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	-583461	+	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	677782	-	TSC_hg19_v1_chr9_-_120177336 BX649176	677803	-	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	966933	+	NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2##BX649176|ASTN2|23245|astrotactin 2##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4	0.99962	CTCF.p2:-16:1.000
chr12	6934867	6934972	reg1003824.p1	13.800	+	TSC_hg19_v1_chr12_+_6931000 AK316512 BC002353 NM_014449 NM_019858 U47925 U47928 BC080585 AK315938 BC007918 AK296359	-4052	+	TSC_hg19_v1_chr12_+_6898717 AK300052 AK308344 BC025782	-36172	+	TSC_hg19_v1_chr12_+_6898701 AK310652 AK310750 AK311495 AK315898 AK312828 AK316462 AK310687	-36218	+	TSC_hg19_v1_chr12_+_6937571 NM_014262 AK025976	2653	+	BC080630 TSC_hg19_v1_chr12_+_6937783 BC067251 BC017217	2961	+	NM_002075 U47930	14455	+	AK316512|GPR162|27239|G protein-coupled receptor 162##BC002353|GPR162|27239|G protein-coupled receptor 162##NM_014449|GPR162|27239|G protein-coupled receptor 162##NM_019858|GPR162|27239|G protein-coupled receptor 162##U47925|GPR162|27239|G protein-coupled receptor 162##U47928|GPR162|27239|G protein-coupled receptor 162##BC080585|GPR162|27239|G protein-coupled receptor 162##AK315938|GPR162|27239|G protein-coupled receptor 162##BC007918|GPR162|27239|G protein-coupled receptor 162##AK296359|GPR162|27239|G protein-coupled receptor 162##AK300052|CD4|920|CD4 molecule##AK308344|CD4|920|CD4 molecule##BC025782|CD4|920|CD4 molecule##AK310652|CD4|920|CD4 molecule##AK310750|CD4|920|CD4 molecule##AK311495|CD4|920|CD4 molecule##AK315898|CD4|920|CD4 molecule##AK312828|CD4|920|CD4 molecule##AK316462|CD4|920|CD4 molecule##AK310687|CD4|920|CD4 molecule##NM_014262|LEPREL2|10536|leprecan-like 2##AK025976|LEPREL2|10536|leprecan-like 2##BC080630|LEPREL2|10536|leprecan-like 2##BC067251|LEPREL2|10536|leprecan-like 2##BC017217|LEPREL2|10536|leprecan-like 2##NM_002075|GNB3|2784|guanine nucleotide binding protein (G protein), beta polypeptide 3##U47930|GNB3|2784|guanine nucleotide binding protein (G protein), beta polypeptide 3	0.99924	CTCF.p2:19:0.999
chr16	83990489	83990623	reg1004703.p1	13.800	+	NM_182981 TSC_hg19_v1_chr16_+_83986844 AK290383 AY258068 AY037158 BC020434 BC032476 BC093687 BC113417	-3672	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	-57787	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	-148900	+	TSC_hg19_v1_chr16_+_84002230 AY299331 NM_019065 BC131615 AK127376	11656	+	NM_001080442	85205	-	TSC_hg19_v1_chr16_-_84150441 AK291773 BC114555 BC114961 AK299067	159856	-	NM_182981|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK290383|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY258068|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY037158|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC020434|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC032476|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC093687|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC113417|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##AY299331|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_019065|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##BC131615|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##AK127376|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_001080442|SLC38A8|146167|solute carrier family 38, member 8##AK291773|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114555|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114961|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##AK299067|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1	0.998772	CTCF.p2:-18:0.999
chr7	151145873	151145995	reg1003961.p1	13.799	+	BC100878 BC100879 BC100880 BC100881 AF445455 NM_144727	-8839	-	TSC_hg19_v1_chr7_-_151107122 NM_198285	-38813	-	AK056624 TSC_hg19_v1_chr7_-_151071775	-74198	-	AB528681 AF493921 BT006958 CU688134 D78132 Z29677 TSC_hg19_v1_chr7_-_151216661	70695	-	TSC_hg19_v1_chr7_-_151216740 AK289370 AF148645	70784	-	TSC_hg19_v1_chr7_-_151216769 BC066307	70835	-	BC100878|CRYGN|155051|crystallin, gamma N##BC100879|CRYGN|155051|crystallin, gamma N##BC100880|CRYGN|155051|crystallin, gamma N##BC100881|CRYGN|155051|crystallin, gamma N##AF445455|CRYGN|155051|crystallin, gamma N##NM_144727|CRYGN|155051|crystallin, gamma N##NM_198285|WDR86|349136|WD repeat domain 86##AF493921|RHEB|6009|Ras homolog enriched in brain##BT006958|RHEB|6009|Ras homolog enriched in brain##D78132|RHEB|6009|Ras homolog enriched in brain##Z29677|RHEB|6009|Ras homolog enriched in brain##AK289370|RHEB|6009|Ras homolog enriched in brain##AF148645|RHEB|6009|Ras homolog enriched in brain##BC066307|RHEB|6009|Ras homolog enriched in brain	0.156925	
chr20	17517719	17517844	reg1003405.p1	13.798	+	AF039655 Y16717 TSC_hg19_v1_chr20_-_17512006 NM_001195	-5789	-	TSC_hg19_v1_chr20_+_17207684 BC005815 AK294200 AK312341 J05252 AB528512 DQ892675 DQ895917	-309966	+	BC001905 TSC_hg19_v1_chr20_+_17207673	-310110	+	AK316247 BC041483 NM_001161705	21761	-	NM_001011546 NM_006870 TSC_hg19_v1_chr20_+_17550756 AK315994 BC009477 AK312645 BX647319 S65738 AK302338	32958	+	TSC_hg19_v1_chr20_-_17641123 AB287347 AB384598	123355	-	AF039655|BFSP1|631|beaded filament structural protein 1, filensin##Y16717|BFSP1|631|beaded filament structural protein 1, filensin##NM_001195|BFSP1|631|beaded filament structural protein 1, filensin##BC005815|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK294200|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK312341|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##J05252|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##DQ892675|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##DQ895917|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK316247|BFSP1|631|beaded filament structural protein 1, filensin##BC041483|BFSP1|631|beaded filament structural protein 1, filensin##NM_001161705|BFSP1|631|beaded filament structural protein 1, filensin##NM_001011546|DSTN|11034|destrin (actin depolymerizing factor)##NM_006870|DSTN|11034|destrin (actin depolymerizing factor)##AK315994|DSTN|11034|destrin (actin depolymerizing factor)##BC009477|DSTN|11034|destrin (actin depolymerizing factor)##AK312645|DSTN|11034|destrin (actin depolymerizing factor)##BX647319|DSTN|11034|destrin (actin depolymerizing factor)##S65738|DSTN|11034|destrin (actin depolymerizing factor)##AK302338|DSTN|11034|destrin (actin depolymerizing factor)##AB287347|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)	0.471705	CTCF.p2:-14:0.443
chr10	72968924	72969059	reg1004671.p1	13.797	+	NM_000281	-320451	-	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	-320689	-	TSC_hg19_v1_chr10_+_72575751 AB033078 AJ011304	-393236	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	3389	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	110034	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	110055	+	NM_000281|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AB033078|SGPL1|8879|sphingosine-1-phosphate lyase 1##AJ011304|SGPL1|8879|sphingosine-1-phosphate lyase 1##AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3	0.529353	CTCF.p2:7:0.478
chr21	30536804	30536949	reg1005434.p1	13.797	+	TSC_hg19_v1_chr21_+_30517918 AK309998 EF219160	-18966	+	AY171599 NM_020152	-84004	+	AK308063 TSC_hg19_v1_chr21_-_30445995 AK298801 BC072001 BC005220 NM_006585	-90887	-	TSC_hg19_v1_chr21_+_30671158 AK291021 AB002803	134288	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	134344	+	TSC_hg19_v1_chr21_+_30671242 AK313791 BC063307	134365	+	AK309998|C21orf7|56911|chromosome 21 open reading frame 7##EF219160|C21orf7|56911|chromosome 21 open reading frame 7##AY171599|C21orf7|56911|chromosome 21 open reading frame 7##NM_020152|C21orf7|56911|chromosome 21 open reading frame 7##AK308063|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK298801|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC072001|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC005220|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##NM_006585|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK291021|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AB002803|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AK313791|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC063307|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	0.0	
chr8	49891640	49891766	reg1003078.p1	13.796	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-57793	-	AK021829 BC025676 BC029586 AK316037 AK299659 AK307101 NM_001142857 NM_024593	-243910	-	TSC_hg19_v1_chr8_+_48920990 BC016332 BC016710 BC007051 AK313447 U62136 AF049140 BC028673 BC062418 NM_003350	-970722	+	NM_001007176 BC017981 AJ276240	93206	+	AJ003030 NM_018967	932893	+	EU170240 AY877349 NM_144651	2830250	-	EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##AK021829|EFCAB1|79645|EF-hand calcium binding domain 1##BC025676|EFCAB1|79645|EF-hand calcium binding domain 1##BC029586|EFCAB1|79645|EF-hand calcium binding domain 1##AK316037|EFCAB1|79645|EF-hand calcium binding domain 1##AK299659|EFCAB1|79645|EF-hand calcium binding domain 1##AK307101|EFCAB1|79645|EF-hand calcium binding domain 1##NM_001142857|EFCAB1|79645|EF-hand calcium binding domain 1##NM_024593|EFCAB1|79645|EF-hand calcium binding domain 1##BC016332|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC016710|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC007051|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AK313447|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##U62136|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AF049140|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC028673|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC062418|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##NM_003350|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like	0.996624	CTCF.p2:0:0.997
chr14	22860395	22860544	reg1004198.p1	13.795	+	AB463964 NM_001001912 AY726598	-727147	+	NM_001005466 AB529274 BC137371 BC137382	-757423	-	AB528817 NM_001005465	-821595	-	X58763 TSC_hg19_v1_chr14_+_22989364	128880	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	197617	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	197665	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.445855	CTCF.p2:-40:0.446
chr14	23764325	23764437	reg1002735.p1	13.795	+	NM_020834 TSC_hg19_v1_chr14_-_23755308	-9056	-	AB037864 AF463523 TSC_hg19_v1_chr14_-_23755306 AK296927	-9112	-	TSC_hg19_v1_chr14_-_23652870 AL365342 NM_012244 Y18483 AL365346 AK223610	-111509	-	NM_001199864 NM_004050 AK289519 TSC_hg19_v1_chr14_+_23776072 BC104789 BC113522 D87461 BC011637 NM_001199839	11663	+	NM_004643	25015	+	TSC_hg19_v1_chr14_+_23790671 BX247976 BC010939	26293	+	NM_020834|HOMEZ|57594|homeobox and leucine zipper encoding##AB037864|HOMEZ|57594|homeobox and leucine zipper encoding##AF463523|HOMEZ|57594|homeobox and leucine zipper encoding##AK296927|HOMEZ|57594|homeobox and leucine zipper encoding##AL365342|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##NM_012244|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##Y18483|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AL365346|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AK223610|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##NM_001199864|BCL2L2-PABPN1|100529063|BCL2L2-PABPN1 readthrough##NM_004050|BCL2L2|599|BCL2-like 2##AK289519|BCL2L2|599|BCL2-like 2##BC104789|BCL2L2|599|BCL2-like 2##BC113522|BCL2L2|599|BCL2-like 2##D87461|BCL2L2|599|BCL2-like 2##BC011637|BCL2L2-PABPN1|100529063|BCL2L2-PABPN1 readthrough##NM_001199839|BCL2L2|599|BCL2-like 2##NM_004643|PABPN1|8106|poly(A) binding protein, nuclear 1##BX247976|PABPN1|8106|poly(A) binding protein, nuclear 1##BC010939|PABPN1|8106|poly(A) binding protein, nuclear 1	0.97949	CTCF.p2:8:0.979
chr7	110730004	110730132	reg1005741.p1	13.794	+	NM_001024607	-2205432	-	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-2519694	+	TSC_hg19_v1_chr7_+_108210292 AK092204	-2519770	+	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	1055	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	472416	-	TSC_hg19_v1_chr7_-_111428948 AK294820	698943	-	NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AK092204|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK294820|DOCK4|9732|dedicator of cytokinesis 4	0.928554	CTCF.p2:-3:0.929
chr20	23870485	23870602	reg1003426.p1	13.793	+	AB590893 CU686872 HQ447459 BC069514 X70377 BC062678 NM_001900	-10197	-	CU687582 NM_001322 BC062679	-63211	-	J03870 BC021225 NM_001898	-138978	-	L20492 L20491 NM_178312	96928	-	BC040904 NM_178311	98872	-	AK024282 NM_024893	579291	+	HQ447459|CST5|1473|cystatin D##BC069514|CST5|1473|cystatin D##X70377|CST5|1473|cystatin D##BC062678|CST5|1473|cystatin D##NM_001900|CST5|1473|cystatin D##NM_001322|CST2|1470|cystatin SA##BC062679|CST2|1470|cystatin SA##J03870|CST1|1469|cystatin SN##BC021225|CST1|1469|cystatin SN##NM_001898|CST1|1469|cystatin SN##L20492|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20491|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178312|GGTLC1|92086|gamma-glutamyltransferase light chain 1##BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1	0.999062	CTCF.p2:-20:0.999
chr17	43463001	43463122	reg1003295.p2	13.791	+	TSC_hg19_v1_chr17_-_43394387 BC035576 BC022296 AK290203 AK313085 NM_003954	-68686	-	BC028124 AF433663 AK302184 AK058143 NM_152343	-123606	-	TSC_hg19_v1_chr17_+_43325300 AK311429	-137757	+	TSC_hg19_v1_chr17_-_43487753 AK092891 AX747793 AK300880	24689	-	TSC_hg19_v1_chr17_-_43503000 AK125535 NM_199282	39940	-	TSC_hg19_v1_chr17_-_43510237 AK290650	47166	-	BC035576|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC022296|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK290203|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK313085|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##NM_003954|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC028124|C17orf46|124783|chromosome 17 open reading frame 46##AF433663|C17orf46|124783|chromosome 17 open reading frame 46##AK302184|C17orf46|124783|chromosome 17 open reading frame 46##AK058143|C17orf46|124783|chromosome 17 open reading frame 46##NM_152343|C17orf46|124783|chromosome 17 open reading frame 46##AK311429|LOC100133991|100133991|uncharacterized LOC100133991##AK092891|ARHGAP27|201176|Rho GTPase activating protein 27##AK300880|ARHGAP27|201176|Rho GTPase activating protein 27##AK125535|ARHGAP27|201176|Rho GTPase activating protein 27##NM_199282|ARHGAP27|201176|Rho GTPase activating protein 27##AK290650|ARHGAP27|201176|Rho GTPase activating protein 27	0.999644	CTCF.p2:19:1.000
chr10	11800030	11800142	reg1002983.p1	13.790	+	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	-15688	+	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	-146450	-	NM_001080491	-225813	-	TSC_hg19_v1_chr10_+_11865354 BC017269 BC048800 NM_153256	65272	+	AK056703 TSC_hg19_v1_chr10_-_11936707	136616	-	TSC_hg19_v1_chr10_-_12084777 BC054011 AK310925 BC114964 BC115737 BC090919 NM_015542 AF318574 AF301013 AK096191	284722	-	NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_001080491|USP6NL|9712|USP6 N-terminal like##BC017269|C10orf47|254427|chromosome 10 open reading frame 47##BC048800|C10orf47|254427|chromosome 10 open reading frame 47##NM_153256|C10orf47|254427|chromosome 10 open reading frame 47##AK056703|LOC219731|219731|uncharacterized LOC219731##AK310925|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC114964|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC115737|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC090919|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##NM_015542|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AF318574|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AF301013|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AK096191|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)	0.998131	CTCF.p2:19:0.998
chr17	57082344	57082475	reg1003311.p1	13.790	+	AB028995 AF260269 BC151228 NM_014906 TSC_hg19_v1_chr17_+_56833235 BC136290 BC143845 AF520614	-249115	+	TSC_hg19_v1_chr17_+_56833220 AK289966	-249192	+	TSC_hg19_v1_chr17_+_56769962 AF029669 AK290487 BC073161 NM_002876 NM_058216 BC064578 BC093930 BC101485 BC143259 BC000667 AF029670 AB528656 BT007339 AK129738 AK303363	-312408	+	TSC_hg19_v1_chr17_-_57184098 AF213365 AK289674 BX537955	101664	-	BC036012 TSC_hg19_v1_chr17_-_57184114	101705	-	TSC_hg19_v1_chr17_-_57184116 AK292459	101730	-	AB028995|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AF260269|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##BC151228|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##NM_014906|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##BC136290|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##BC143845|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AF520614|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AK289966|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF213365|TRIM37|4591|tripartite motif containing 37##AK289674|TRIM37|4591|tripartite motif containing 37##BX537955|TRIM37|4591|tripartite motif containing 37##BC036012|TRIM37|4591|tripartite motif containing 37##AK292459|TRIM37|4591|tripartite motif containing 37	0.968468	CTCF.p2:15:0.968
chr2	47615553	47615650	reg1003342.p2	13.790	+	TSC_hg19_v1_chr2_+_47596449 AK026585 BC014785 M26481 M32325 X14758 M33011 M32306 DQ891338 DQ894520 CR542259 CR542283	-19056	+	NM_002354 TSC_hg19_v1_chr2_+_47596376	-19259	+	TSC_hg19_v1_chr2_-_47403685 NM_001743	-211892	-	TSC_hg19_v1_chr2_+_47630218 AK304496	14603	+	TSC_hg19_v1_chr2_+_47630289 BC012599 NM_000251 U04045 AK222860 L47574 L47575 L47576 L47577 L47578 L47579 L47580 L47581 L47582 L47583	14667	+	TSC_hg19_v1_chr2_+_47630294 AK223284 AK296831 AK297763 BX649122 BC021566 AK311330 DQ892558 DQ895772 AB489153 BC001122 U03911 CU692370 DQ648894	14716	+	AK026585|EPCAM|4072|epithelial cell adhesion molecule##BC014785|EPCAM|4072|epithelial cell adhesion molecule##M26481|EPCAM|4072|epithelial cell adhesion molecule##M32325|EPCAM|4072|epithelial cell adhesion molecule##X14758|EPCAM|4072|epithelial cell adhesion molecule##M33011|EPCAM|4072|epithelial cell adhesion molecule##M32306|EPCAM|4072|epithelial cell adhesion molecule##DQ891338|EPCAM|4072|epithelial cell adhesion molecule##DQ894520|EPCAM|4072|epithelial cell adhesion molecule##CR542259|EPCAM|4072|epithelial cell adhesion molecule##CR542283|EPCAM|4072|epithelial cell adhesion molecule##NM_002354|EPCAM|4072|epithelial cell adhesion molecule##NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC012599|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##NM_000251|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U04045|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK222860|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47574|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47575|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47576|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47577|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47578|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47579|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47580|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47581|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47582|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47583|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK223284|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK296831|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK297763|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BX649122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC021566|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK311330|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ892558|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ895772|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC001122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U03911|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ648894|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.94626	CTCF.p2:4:0.946
chr2	69786951	69787095	reg1004610.p1	13.789	+	BC113692 BC113694 AY335194 NM_001002755 NM_001002756 NM_001002757 NM_015700 TSC_hg19_v1_chr2_-_69664788	-122264	-	TSC_hg19_v1_chr2_-_69664606 AY286306 AY286307 BX538347	-122409	-	AJ132584 AF132967 AB528729 HQ258750 TSC_hg19_v1_chr2_-_69664568 AK300700 AK308567	-122450	-	TSC_hg19_v1_chr2_-_69870783 AK310951 AK056043	83745	-	TSC_hg19_v1_chr2_-_69870872 AB028971	83834	-	NM_014911 TSC_hg19_v1_chr2_-_69871063 BC090950	84069	-	BC113692|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BC113694|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY335194|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_001002755|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_001002756|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_001002757|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_015700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286306|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286307|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BX538347|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AJ132584|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AF132967|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##HQ258750|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK300700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK308567|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK310951|AAK1|22848|AP2 associated kinase 1##AK056043|AAK1|22848|AP2 associated kinase 1##AB028971|AAK1|22848|AP2 associated kinase 1##NM_014911|AAK1|22848|AP2 associated kinase 1##BC090950|AAK1|22848|AP2 associated kinase 1	0.963961	CTCF.p2:-12:0.964
chr11	19092838	19092972	reg1005184.p1	13.788	+	BC063450 NM_054030	-10678	-	BC096835 NM_147199	-136359	-	AK294374 BC064807 AK316270 AK294673 BC039897 AK295604 AK090923 AX746685 AL832541 NM_001039970 NM_006906 NM_032781 TSC_hg19_v1_chr11_-_18813404	-279640	-	TSC_hg19_v1_chr11_+_19138714 BC050690 BC056152 NM_001001483 NM_019028 AB097014 AB097027 AK001714 BX648156 BC036020 AK291348 AB024495 CU691124	45812	+	U20324 U72899 U49837 BC057221 NM_001127656 TSC_hg19_v1_chr11_-_19223531 AK313289 NM_003476 AF121260	130653	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	169570	-	BC063450|MRGPRX2|117194|MAS-related GPR, member X2##NM_054030|MRGPRX2|117194|MAS-related GPR, member X2##BC096835|MRGPRX1|259249|MAS-related GPR, member X1##NM_147199|MRGPRX1|259249|MAS-related GPR, member X1##AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC050690|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BC056152|ZDHHC13|54503|zinc finger, DHHC-type containing 13##NM_001001483|ZDHHC13|54503|zinc finger, DHHC-type containing 13##NM_019028|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB097014|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB097027|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AK001714|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BX648156|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BC036020|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AK291348|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB024495|ZDHHC13|54503|zinc finger, DHHC-type containing 13##U20324|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U72899|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U49837|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##BC057221|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_001127656|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AK313289|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_003476|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AF121260|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8	1.074993	CTCF.p2:-23:0.559	CTCF.p2:33:0.516
chr5	169695017	169695138	reg1002481.p1	13.788	+	BC030767 NM_001102609 BC092511	-35081	+	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	-162106	+	AK055998 NM_001129891	-287334	-	BT007273 FN432830 DQ890681 DQ893863 AB527802 TSC_hg19_v1_chr5_-_169724688	29574	-	TSC_hg19_v1_chr5_-_169724734 BC016618 AK310369	29678	-	AK292890 TSC_hg19_v1_chr5_-_169724784 AK300000	29721	-	BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##BT007273|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##FN432830|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ890681|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ893863|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK292890|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK300000|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	1.136103	CTCF.p2:-23:0.998
chr1	109806325	109806444	reg1003060.p1	13.786	+	AF234887 NM_001408	-13744	+	TSC_hg19_v1_chr1_+_109756589 BC000716 D49914 AB528307 CU679341 DQ892144 DQ895339	-49785	+	TSC_hg19_v1_chr1_+_109756577 BC009390	-49813	+	TSC_hg19_v1_chr1_-_109825736 AK126567 AK289593 BX649139	19328	-	TSC_hg19_v1_chr1_-_109825755 BC017190	19370	-	TSC_hg19_v1_chr1_-_109825768 AF223000 NM_001005290 NM_001032291 NM_032636 BC056909	19403	-	AF234887|CELSR2|1952|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)##NM_001408|CELSR2|1952|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)##BC000716|SARS|6301|seryl-tRNA synthetase##D49914|SARS|6301|seryl-tRNA synthetase##DQ892144|SARS|6301|seryl-tRNA synthetase##DQ895339|SARS|6301|seryl-tRNA synthetase##BC009390|SARS|6301|seryl-tRNA synthetase##AK126567|PSRC1|84722|proline/serine-rich coiled-coil 1##AK289593|PSRC1|84722|proline/serine-rich coiled-coil 1##BX649139|PSRC1|84722|proline/serine-rich coiled-coil 1##AF223000|PSRC1|84722|proline/serine-rich coiled-coil 1##NM_001005290|PSRC1|84722|proline/serine-rich coiled-coil 1##NM_001032291|PSRC1|84722|proline/serine-rich coiled-coil 1##NM_032636|PSRC1|84722|proline/serine-rich coiled-coil 1##BC056909|PSRC1|84722|proline/serine-rich coiled-coil 1	0.947962	CTCF.p2:-10:0.948
chr6	131520947	131521081	reg1004678.p1	13.785	+	NM_016377 TSC_hg19_v1_chr6_+_131456855 AK300587	-64167	+	TSC_hg19_v1_chr6_-_131384387 AK295124 NM_001135554 NM_001135555 NM_001199388 NM_001431	-136590	-	AF027299 TSC_hg19_v1_chr6_-_131384381 BC034718 AB209522	-136663	-	NM_004842 NM_138633	50284	+	NM_000045 NM_001244438 AY074488 BC005321 TSC_hg19_v1_chr6_+_131894365 M14502 BC020653 CU676606 AB590280 DQ892039 DQ895230 BT006741	373368	+	AB385438 AF135022 AM393572 EU832308 EU832392 EU392526 EU392528 EU392529 EU392530 EU392531 AK315030 AF105332 EU392520 EU392522 EU392527 EU392532 BC060759 TSC_hg19_v1_chr6_-_131949372 AF104255 AL136776 AB033042 BC007088 NM_004830 NM_015979	428273	-	NM_016377|AKAP7|9465|A kinase (PRKA) anchor protein 7##AK300587|AKAP7|9465|A kinase (PRKA) anchor protein 7##AK295124|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001135554|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001135555|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199388|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001431|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AF027299|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##BC034718|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AB209522|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_000045|ARG1|383|arginase, liver##NM_001244438|ARG1|383|arginase, liver##AY074488|ARG1|383|arginase, liver##BC005321|ARG1|383|arginase, liver##M14502|ARG1|383|arginase, liver##BC020653|ARG1|383|arginase, liver##DQ892039|ARG1|383|arginase, liver##DQ895230|ARG1|383|arginase, liver##BT006741|ARG1|383|arginase, liver##AF135022|MED23|9439|mediator complex subunit 23##AM393572|MED23|9439|mediator complex subunit 23##EU832308|MED23|9439|mediator complex subunit 23##EU832392|MED23|9439|mediator complex subunit 23##EU392526|MED23|9439|mediator complex subunit 23##EU392528|MED23|9439|mediator complex subunit 23##EU392529|MED23|9439|mediator complex subunit 23##EU392530|MED23|9439|mediator complex subunit 23##EU392531|MED23|9439|mediator complex subunit 23##AK315030|MED23|9439|mediator complex subunit 23##AF105332|MED23|9439|mediator complex subunit 23##EU392520|MED23|9439|mediator complex subunit 23##EU392522|MED23|9439|mediator complex subunit 23##EU392527|MED23|9439|mediator complex subunit 23##EU392532|MED23|9439|mediator complex subunit 23##BC060759|MED23|9439|mediator complex subunit 23##AF104255|MED23|9439|mediator complex subunit 23##AL136776|MED23|9439|mediator complex subunit 23##AB033042|MED23|9439|mediator complex subunit 23##BC007088|MED23|9439|mediator complex subunit 23##NM_004830|MED23|9439|mediator complex subunit 23##NM_015979|MED23|9439|mediator complex subunit 23	0.329432	CTCF.p2:-15:0.316
chr11	87063912	87064043	reg1003329.p1	13.784	+	AK024853 TSC_hg19_v1_chr11_+_87032449	-31535	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	-314999	+	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	-397589	-	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	844615	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	1006890	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	1006925	-	AK024853|TMEM135|65084|transmembrane protein 135##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C	0.999789	CTCF.p2:-5:1.000
chr15	68155866	68156006	reg1004701.p1	13.784	+	NM_001031807	-37996	+	AK293459 NM_001206804	-314595	+	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	-320914	+	AF167160 NM_016166 BC118587 BC121797 TSC_hg19_v1_chr15_+_68346652 AK314515 BC104646	190676	+	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	190725	+	TSC_hg19_v1_chr15_-_68497633 BX640702 BC009516 AK092628 AK296804 AX747637	341701	-	NM_001031807|SKOR1|390598|SKI family transcriptional corepressor 1##AK293459|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_001206804|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5##AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1##NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1##BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1##BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1##AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1##BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1##BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1##BX640702|CALML4|91860|calmodulin-like 4##BC009516|CALML4|91860|calmodulin-like 4##AK092628|CALML4|91860|calmodulin-like 4##AK296804|CALML4|91860|calmodulin-like 4	0.999653	CTCF.p2:-10:1.000
chr4	148629447	148629580	reg1004389.p1	13.784	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	-24249	-	TSC_hg19_v1_chr4_+_148538568 AK001708	-90907	+	TSC_hg19_v1_chr4_+_148538547 BC046128 NM_018241	-90980	+	TSC_hg19_v1_chr4_+_148653238 AK123785	23738	+	AB050785 BC128055 NM_024605 BC126899 BC109029 BC109030	23944	+	TSC_hg19_v1_chr4_-_149357955 AB587357	728469	-	BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK001708|TMEM184C|55751|transmembrane protein 184C##BC046128|TMEM184C|55751|transmembrane protein 184C##NM_018241|TMEM184C|55751|transmembrane protein 184C##AK123785|ARHGAP10|79658|Rho GTPase activating protein 10##AB050785|ARHGAP10|79658|Rho GTPase activating protein 10##BC128055|ARHGAP10|79658|Rho GTPase activating protein 10##NM_024605|ARHGAP10|79658|Rho GTPase activating protein 10##BC126899|ARHGAP10|79658|Rho GTPase activating protein 10##BC109029|ARHGAP10|79658|Rho GTPase activating protein 10##BC109030|ARHGAP10|79658|Rho GTPase activating protein 10	0.0	
chr2	75867793	75867909	reg1004862.p1	13.783	+	AK023453 NM_032181	-71004	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	-79761	-	BC016157 TSC_hg19_v1_chr2_-_75788066	-79804	-	TSC_hg19_v1_chr2_+_75873908 NM_014763 AK295578 AK291250 BC030144 CU688824 AB463123 BC021051 D14660 DQ892303 DQ895502	6087	+	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	69868	-	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	70200	-	AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_014763|MRPL19|9801|mitochondrial ribosomal protein L19##AK295578|MRPL19|9801|mitochondrial ribosomal protein L19##AK291250|MRPL19|9801|mitochondrial ribosomal protein L19##BC030144|MRPL19|9801|mitochondrial ribosomal protein L19##BC021051|MRPL19|9801|mitochondrial ribosomal protein L19##D14660|MRPL19|9801|mitochondrial ribosomal protein L19##DQ892303|MRPL19|9801|mitochondrial ribosomal protein L19##DQ895502|MRPL19|9801|mitochondrial ribosomal protein L19##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2	0.96862	CTCF.p2:-9:0.969
chr1	226099143	226099264	reg1003271.p1	13.782	+	CU693310 AB590421 DQ896626 AY358873 BC027883 AF081512 AK309263 TSC_hg19_v1_chr1_-_226076847 AK129605 AK222714 AK313115 NM_020997	-22395	-	NM_014698	-28784	-	TSC_hg19_v1_chr1_-_226070033 AB018335 AK222934 AK222944 BC030245 AK022502	-29153	-	TSC_hg19_v1_chr1_-_226111850 CU676554 AF151351	12624	-	TSC_hg19_v1_chr1_-_226111873 AK291913	12666	-	BC014868 TSC_hg19_v1_chr1_-_226111970 AF087859 BC020553 NM_013328	12748	-	DQ896626|LEFTY1|10637|left-right determination factor 1##AY358873|LEFTY1|10637|left-right determination factor 1##BC027883|LEFTY1|10637|left-right determination factor 1##AF081512|LEFTY1|10637|left-right determination factor 1##AK309263|LEFTY1|10637|left-right determination factor 1##AK129605|LEFTY1|10637|left-right determination factor 1##AK222714|LEFTY1|10637|left-right determination factor 1##AK313115|LEFTY1|10637|left-right determination factor 1##NM_020997|LEFTY1|10637|left-right determination factor 1##NM_014698|TMEM63A|9725|transmembrane protein 63A##AB018335|TMEM63A|9725|transmembrane protein 63A##AK222934|TMEM63A|9725|transmembrane protein 63A##AK222944|TMEM63A|9725|transmembrane protein 63A##BC030245|TMEM63A|9725|transmembrane protein 63A##AK022502|TMEM63A|9725|transmembrane protein 63A##AF151351|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##AK291913|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC014868|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##AF087859|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC020553|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##NM_013328|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2	0.991823	CTCF.p2:9:0.992
chr12	57846798	57846925	reg1004607.p1	13.781	+	TSC_hg19_v1_chr12_+_57828511 AK314849 BC020693 NM_005538 X82540 BC130324 BC130326 AB590801	-18298	+	AB023219 AX775761 AX775763 TSC_hg19_v1_chr12_-_57824797	-22049	-	NM_014925	-142616	-	TSC_hg19_v1_chr12_+_57849089 NM_031479 AK075285 BC005161 AF412024	2237	+	AK297899 NM_001160045 NM_001167609 NM_005269 X07384 AB239135 AB239136	7081	+	AK301095 AK057573 AB030239 NM_001080156	24818	-	AK314849|INHBC|3626|inhibin, beta C##BC020693|INHBC|3626|inhibin, beta C##NM_005538|INHBC|3626|inhibin, beta C##BC130324|INHBC|3626|inhibin, beta C##BC130326|INHBC|3626|inhibin, beta C##AB023219|R3HDM2|22864|R3H domain containing 2##AX775761|R3HDM2|22864|R3H domain containing 2##AX775763|R3HDM2|22864|R3H domain containing 2##NM_014925|R3HDM2|22864|R3H domain containing 2##NM_031479|INHBE|83729|inhibin, beta E##AK075285|INHBE|83729|inhibin, beta E##BC005161|INHBE|83729|inhibin, beta E##AF412024|INHBE|83729|inhibin, beta E##AK297899|GLI1|2735|GLI family zinc finger 1##NM_001160045|GLI1|2735|GLI family zinc finger 1##NM_001167609|GLI1|2735|GLI family zinc finger 1##NM_005269|GLI1|2735|GLI family zinc finger 1##X07384|GLI1|2735|GLI family zinc finger 1##AB239135|GLI1|2735|GLI family zinc finger 1##AB239136|GLI1|2735|GLI family zinc finger 1##AK301095|ARHGAP9|64333|Rho GTPase activating protein 9##AK057573|ARHGAP9|64333|Rho GTPase activating protein 9##AB030239|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080156|ARHGAP9|64333|Rho GTPase activating protein 9	0.837284	CTCF.p2:12:0.837
chr11	88285698	88285836	reg1004696.p1	13.780	+	TSC_hg19_v1_chr11_-_88070905 BX537913 NM_001114173 NM_001814 NM_148170	-214836	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	-214865	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	-214900	-	AY608336 D28538 D28539 NM_001143831	495372	-	AK291362 NM_000842	511048	-	NM_000372 BC027179 M74314 Y00819 U01873 J03581	625313	+	BX537913|CTSC|1075|cathepsin C##NM_001114173|CTSC|1075|cathepsin C##NM_001814|CTSC|1075|cathepsin C##NM_148170|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AY608336|GRM5|2915|glutamate receptor, metabotropic 5##D28538|GRM5|2915|glutamate receptor, metabotropic 5##D28539|GRM5|2915|glutamate receptor, metabotropic 5##NM_001143831|GRM5|2915|glutamate receptor, metabotropic 5##AK291362|GRM5|2915|glutamate receptor, metabotropic 5##NM_000842|GRM5|2915|glutamate receptor, metabotropic 5##NM_000372|TYR|7299|tyrosinase (oculocutaneous albinism IA)##BC027179|TYR|7299|tyrosinase (oculocutaneous albinism IA)##M74314|TYR|7299|tyrosinase (oculocutaneous albinism IA)##Y00819|TYR|7299|tyrosinase (oculocutaneous albinism IA)##U01873|TYR|7299|tyrosinase (oculocutaneous albinism IA)##J03581|TYR|7299|tyrosinase (oculocutaneous albinism IA)	0.99774	CTCF.p2:12:0.998
chr10	82204572	82204703	reg1004627.p1	13.778	+	NM_001243778 NM_001243782 TSC_hg19_v1_chr10_+_82173588 AK126292 AK225387 BC005871 BC071938	-31044	+	TSC_hg19_v1_chr10_+_82168316 NM_001243780 NM_001243781 NM_032333 AK075447 AK074643 AK315440 AY359059	-36334	+	NM_001243779	-37053	+	TSC_hg19_v1_chr10_+_82214037 BC093016 NM_001128309 NM_030927	9338	+	AK074558 AK295321 AL136638 TSC_hg19_v1_chr10_+_82214066	9431	+	TSC_hg19_v1_chr10_+_82214071 AF311903	9434	+	NM_001243778|C10orf58|84293|chromosome 10 open reading frame 58##NM_001243782|C10orf58|84293|chromosome 10 open reading frame 58##AK126292|C10orf58|84293|chromosome 10 open reading frame 58##AK225387|C10orf58|84293|chromosome 10 open reading frame 58##BC005871|C10orf58|84293|chromosome 10 open reading frame 58##BC071938|C10orf58|84293|chromosome 10 open reading frame 58##NM_001243780|C10orf58|84293|chromosome 10 open reading frame 58##NM_001243781|C10orf58|84293|chromosome 10 open reading frame 58##NM_032333|C10orf58|84293|chromosome 10 open reading frame 58##AK075447|C10orf58|84293|chromosome 10 open reading frame 58##AK074643|C10orf58|84293|chromosome 10 open reading frame 58##AK315440|C10orf58|84293|chromosome 10 open reading frame 58##AY359059|C10orf58|84293|chromosome 10 open reading frame 58##NM_001243779|C10orf58|84293|chromosome 10 open reading frame 58##BC093016|TSPAN14|81619|tetraspanin 14##NM_001128309|TSPAN14|81619|tetraspanin 14##NM_030927|TSPAN14|81619|tetraspanin 14##AK074558|TSPAN14|81619|tetraspanin 14##AK295321|TSPAN14|81619|tetraspanin 14##AL136638|TSPAN14|81619|tetraspanin 14##AF311903|TSPAN14|81619|tetraspanin 14	0.99557	CTCF.p2:-18:0.996
chr21	26268598	26268706	reg1002887.p1	13.778	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-467584	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-3897879	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-3897962	+	TSC_hg19_v1_chr21_+_26934442 AF402776	665820	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	711163	-	NM_021219 TSC_hg19_v1_chr21_+_27011719	743001	+	AK124194|FLJ42200|400860|FLJ42200 protein##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##NM_021219|JAM2|58494|junctional adhesion molecule 2	0.911884	CTCF.p2:-16:0.912
chr8	99953304	99953437	reg1003837.p3	13.778	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	-115523	-	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	-514024	+	BC132687 BC144055 TSC_hg19_v1_chr8_-_99306600 AK024017 NM_024759	-646771	-	NM_001142462 NM_053001 TSC_hg19_v1_chr8_+_99956669 AK074518 AK291491 AK310994 BC016936 AY038073	3287	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	72125	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	72142	+	U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3##BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC132687|NIPAL2|79815|NIPA-like domain containing 2##BC144055|NIPAL2|79815|NIPA-like domain containing 2##AK024017|NIPAL2|79815|NIPA-like domain containing 2##NM_024759|NIPAL2|79815|NIPA-like domain containing 2##NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)##NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)##AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)##AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)##AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)##BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)##AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)	0.994712	CTCF.p2:-19:0.995
chr1	55487842	55487977	reg1003178.p1	13.777	+	AK129999 AY034632 NM_057176 BC103898 BC103899 BC103900	-23288	+	BC029775 NM_182532	-41445	+	NM_014762 TSC_hg19_v1_chr1_-_55352925	-134977	-	NM_174936 TSC_hg19_v1_chr1_+_55505192	17261	+	TSC_hg19_v1_chr1_+_55505220 AK075365	17315	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	193127	-	AK129999|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##AY034632|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_057176|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103898|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103899|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103900|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC029775|TMEM61|199964|transmembrane protein 61##NM_182532|TMEM61|199964|transmembrane protein 61##NM_014762|DHCR24|1718|24-dehydrocholesterol reductase##NM_174936|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##NM_015306|USP24|23358|ubiquitin specific peptidase 24	0.999416	CTCF.p2:18:0.999
chr8	99483440	99483568	reg1004855.p1	13.776	+	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	-44158	+	BC132687 BC144055 TSC_hg19_v1_chr8_-_99306600 AK024017 NM_024759	-176905	-	BC011529 NM_015029	-353437	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	354343	-	NM_001142462 NM_053001 TSC_hg19_v1_chr8_+_99956669 AK074518 AK291491 AK310994 BC016936 AY038073	473153	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	541991	+	BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC132687|NIPAL2|79815|NIPA-like domain containing 2##BC144055|NIPAL2|79815|NIPA-like domain containing 2##AK024017|NIPAL2|79815|NIPA-like domain containing 2##NM_024759|NIPAL2|79815|NIPA-like domain containing 2##BC011529|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015029|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3##NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)##NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)##AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)##AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)##AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)##BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)##AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)	0.999163	CTCF.p2:12:0.999
chr11	102158800	102158940	reg1005280.p1	13.774	+	NM_001195045 AK316116	-175663	+	TSC_hg19_v1_chr11_+_101981177 AK300414 NM_001130145 NM_001195044 NM_006106 BC038235 AB528588 AB567720 AB567721 AY316529	-177668	+	NM_001195005 NM_032930 AK094851 BC054869 TSC_hg19_v1_chr11_+_101918188 BC006128	-240687	+	NM_001165 NM_182962 TSC_hg19_v1_chr11_+_102188214 AF070674	29332	+	TSC_hg19_v1_chr11_+_102217944 AK303197	59059	+	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	59158	+	NM_001195045|YAP1|10413|Yes-associated protein 1##AK316116|YAP1|10413|Yes-associated protein 1##AK300414|YAP1|10413|Yes-associated protein 1##NM_001130145|YAP1|10413|Yes-associated protein 1##NM_001195044|YAP1|10413|Yes-associated protein 1##NM_006106|YAP1|10413|Yes-associated protein 1##BC038235|YAP1|10413|Yes-associated protein 1##AB567720|YAP1|10413|Yes-associated protein 1##AB567721|YAP1|10413|Yes-associated protein 1##AY316529|YAP1|10413|Yes-associated protein 1##NM_001195005|C11orf70|85016|chromosome 11 open reading frame 70##NM_032930|C11orf70|85016|chromosome 11 open reading frame 70##AK094851|C11orf70|85016|chromosome 11 open reading frame 70##BC054869|C11orf70|85016|chromosome 11 open reading frame 70##BC006128|C11orf70|85016|chromosome 11 open reading frame 70##NM_001165|BIRC3|330|baculoviral IAP repeat containing 3##NM_182962|BIRC3|330|baculoviral IAP repeat containing 3##AF070674|BIRC3|330|baculoviral IAP repeat containing 3##AK303197|BIRC2|329|baculoviral IAP repeat containing 2##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2	0.999761	CTCF.p2:-6:1.000
chr2	24632930	24633052	reg1003402.p1	13.774	+	TSC_hg19_v1_chr2_-_24583385 AB033082 BC146779 AF182198 AF182199 BC038963 NM_006277 NM_019595 NM_147152	-49511	-	BC050462 NM_001040710	-235020	+	TSC_hg19_v1_chr2_+_24346339 NM_001145710	-286632	+	NM_003743 NM_147223 NM_147233 AJ000881 AJ000882 U59302	174386	+	TSC_hg19_v1_chr2_-_25016225 CU687260 BC073803 NM_001013663	383247	-	NM_001199803 AK027859 TSC_hg19_v1_chr2_+_25016332 NM_024322 BC002870 AK315483	383280	+	AB033082|ITSN2|50618|intersectin 2##BC146779|ITSN2|50618|intersectin 2##AF182198|ITSN2|50618|intersectin 2##AF182199|ITSN2|50618|intersectin 2##BC038963|ITSN2|50618|intersectin 2##NM_006277|ITSN2|50618|intersectin 2##NM_019595|ITSN2|50618|intersectin 2##NM_147152|ITSN2|50618|intersectin 2##BC050462|C2orf84|653140|chromosome 2 open reading frame 84##NM_001040710|C2orf84|653140|chromosome 2 open reading frame 84##NM_001145710|LOC375190|375190|UPF0638 protein B##NM_003743|NCOA1|8648|nuclear receptor coactivator 1##NM_147223|NCOA1|8648|nuclear receptor coactivator 1##NM_147233|NCOA1|8648|nuclear receptor coactivator 1##AJ000881|NCOA1|8648|nuclear receptor coactivator 1##AJ000882|NCOA1|8648|nuclear receptor coactivator 1##U59302|NCOA1|8648|nuclear receptor coactivator 1##BC073803|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001013663|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001199803|CENPO|79172|centromere protein O##AK027859|CENPO|79172|centromere protein O##NM_024322|CENPO|79172|centromere protein O##BC002870|CENPO|79172|centromere protein O##AK315483|CENPO|79172|centromere protein O	0.936175	CTCF.p2:0:0.936
chr14	22940631	22940756	reg1004436.p1	13.773	+	AB463964 NM_001001912 AY726598	-807371	+	NM_001005466 AB529274 BC137371 BC137382	-837647	-	AB528817 NM_001005465	-901819	-	X58763 TSC_hg19_v1_chr14_+_22989364	48656	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	117393	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	117441	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.497904	CTCF.p2:0:0.488
chr19	35626399	35626543	reg1005482.p1	13.773	+	TSC_hg19_v1_chr19_-_35625994 AJ487519 BC140008 NM_139284	-388	-	AJ487959 BC136694 BC136697 BC087848 AY358121 AF467954 TSC_hg19_v1_chr19_-_35625958	-685	-	X93036 TSC_hg19_v1_chr19_+_35607221 BC005238 AK311689	-19250	+	AK289811 TSC_hg19_v1_chr19_+_35629727 NM_021902	3258	+	NM_005031	3920	+	BC029943 TSC_hg19_v1_chr19_-_35633495	6954	-	AJ487519|LGI4|163175|leucine-rich repeat LGI family, member 4##BC140008|LGI4|163175|leucine-rich repeat LGI family, member 4##NM_139284|LGI4|163175|leucine-rich repeat LGI family, member 4##AJ487959|LGI4|163175|leucine-rich repeat LGI family, member 4##BC136694|LGI4|163175|leucine-rich repeat LGI family, member 4##BC136697|LGI4|163175|leucine-rich repeat LGI family, member 4##BC087848|LGI4|163175|leucine-rich repeat LGI family, member 4##AY358121|LGI4|163175|leucine-rich repeat LGI family, member 4##AF467954|LGI4|163175|leucine-rich repeat LGI family, member 4##X93036|FXYD3|5349|FXYD domain containing ion transport regulator 3##BC005238|FXYD3|5349|FXYD domain containing ion transport regulator 3##AK311689|FXYD3|5349|FXYD domain containing ion transport regulator 3##AK289811|FXYD1|5348|FXYD domain containing ion transport regulator 1##NM_021902|FXYD1|5348|FXYD domain containing ion transport regulator 1##NM_005031|FXYD1|5348|FXYD domain containing ion transport regulator 1##BC029943|LGI4|163175|leucine-rich repeat LGI family, member 4	1.06081	CTCF.p2:-5:0.992
chr1	202284846	202284965	reg1003679.p1	13.772	+	AF190501 NM_001017404	-101623	+	AY358119 BC038795 NM_021636 BC047905	-112013	+	NM_001017403 AB049405	-121731	+	AK000504 AF160215 BC004152 BC019284 TSC_hg19_v1_chr1_-_202311065	26151	-	TSC_hg19_v1_chr1_-_202311082 AF161499 NM_014176	26181	-	TSC_hg19_v1_chr1_+_202317826 AK307591 NM_001167857 NM_001167858 NM_002481 AB003062 AF324888 BC144699 BC110907 BC034430 BC071166	32968	+	AF190501|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_001017404|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AY358119|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC038795|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_021636|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC047905|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_001017403|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AB049405|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AK000504|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AF160215|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##BC004152|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##BC019284|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AF161499|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##NM_014176|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AK307591|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167857|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167858|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_002481|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB003062|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AF324888|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC144699|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC110907|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC034430|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC071166|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B	0.084439	
chr7	28060068	28060211	reg1004021.p1	13.772	+	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-280320	+	BC001764 TSC_hg19_v1_chr7_+_27779809	-280330	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	-280364	+	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	160062	-	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	160267	-	L05913 NM_182899	278800	+	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5	0.955957	CTCF.p2:4:0.956
chr11	10427824	10427932	reg1002714.p1	13.771	+	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	-101249	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	-112112	-	AK098060 TSC_hg19_v1_chr11_+_9779882	-648016	+	AK295046 NM_001172431	43989	+	NM_000480 BC126118 TSC_hg19_v1_chr11_+_10472246 AK311436 M84720 AK289998 AK294444 AK313039 HQ258646	44517	+	NM_001025389 D12775 AK308181 M84721 AK299113 TSC_hg19_v1_chr11_+_10476953	48941	+	AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK098060|LOC283104|283104|uncharacterized LOC283104##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3##NM_000480|AMPD3|272|adenosine monophosphate deaminase 3##BC126118|AMPD3|272|adenosine monophosphate deaminase 3##AK311436|AMPD3|272|adenosine monophosphate deaminase 3##M84720|AMPD3|272|adenosine monophosphate deaminase 3##AK289998|AMPD3|272|adenosine monophosphate deaminase 3##AK294444|AMPD3|272|adenosine monophosphate deaminase 3##AK313039|AMPD3|272|adenosine monophosphate deaminase 3##HQ258646|AMPD3|272|adenosine monophosphate deaminase 3##NM_001025389|AMPD3|272|adenosine monophosphate deaminase 3##D12775|AMPD3|272|adenosine monophosphate deaminase 3##AK308181|AMPD3|272|adenosine monophosphate deaminase 3##M84721|AMPD3|272|adenosine monophosphate deaminase 3##AK299113|AMPD3|272|adenosine monophosphate deaminase 3	0.964918	CTCF.p2:-20:0.965
chr12	14607169	14607291	reg1004121.p1	13.771	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	-68958	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	-88595	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-474244	-	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	113379	-	NM_024829 TSC_hg19_v1_chr12_-_14720806	113574	-	BC136544 BC136545 M73489 TSC_hg19_v1_chr12_-_14849534 S57551 AK310034 NM_004963	242255	-	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1##NM_024829|PLBD1|79887|phospholipase B domain containing 1##BC136544|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##BC136545|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##M73489|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##S57551|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##AK310034|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##NM_004963|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)	0.0	
chr17	8313685	8313837	reg1005476.p1	13.771	+	NM_001146684	-12618	-	TSC_hg19_v1_chr17_-_8286512 BC071664 AK311804 BC066316 D28413 NM_000987	-27257	-	TSC_hg19_v1_chr17_-_8280023 BC024723	-33727	-	TSC_hg19_v1_chr17_+_8339211 AK299559 AF217798 AK056014 NM_001025579 NM_030808 BC026101 AF182078 AY004871	25429	+	BC008968 TSC_hg19_v1_chr17_-_8424250	110475	-	TSC_hg19_v1_chr17_-_8534040 M69181 AB210026 BC144668 BC150634 NM_005964 U34304 AB621820	220285	-	NM_001146684|RNF222|643904|ring finger protein 222##BC071664|RPL26|6154|ribosomal protein L26##AK311804|RPL26|6154|ribosomal protein L26##BC066316|RPL26|6154|ribosomal protein L26##NM_000987|RPL26|6154|ribosomal protein L26##BC024723|KRBA2|124751|KRAB-A domain containing 2##AK299559|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AF217798|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AK056014|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##NM_001025579|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##NM_030808|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##BC026101|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AF182078|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AY004871|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##BC008968|MYH10|4628|myosin, heavy chain 10, non-muscle##M69181|MYH10|4628|myosin, heavy chain 10, non-muscle##AB210026|MYH10|4628|myosin, heavy chain 10, non-muscle##BC144668|MYH10|4628|myosin, heavy chain 10, non-muscle##BC150634|MYH10|4628|myosin, heavy chain 10, non-muscle##NM_005964|MYH10|4628|myosin, heavy chain 10, non-muscle##U34304|MYH10|4628|myosin, heavy chain 10, non-muscle	0.99974	CTCF.p2:4:1.000
chr1	200479366	200479486	reg1003140.p1	13.770	+	BC060820 NM_012482 TSC_hg19_v1_chr1_-_200379187 AK027284	-100232	-	TSC_hg19_v1_chr1_-_200379155 AK297233 AK022916 AK094701	-100309	-	AB384788 CU687444 AF125158 BC051905 TSC_hg19_v1_chr1_-_200378976	-100517	-	TSC_hg19_v1_chr1_-_200589869 D26361 NM_014875	110453	-	AK299219 BC020201 TSC_hg19_v1_chr1_-_200639024 AL136611 BC014183 AK307569	159603	-	TSC_hg19_v1_chr1_-_200639091 BC041801 NM_001031725	159682	-	BC060820|ZNF281|23528|zinc finger protein 281##NM_012482|ZNF281|23528|zinc finger protein 281##AK027284|ZNF281|23528|zinc finger protein 281##AK297233|ZNF281|23528|zinc finger protein 281##AK022916|ZNF281|23528|zinc finger protein 281##AK094701|ZNF281|23528|zinc finger protein 281##AF125158|ZNF281|23528|zinc finger protein 281##BC051905|ZNF281|23528|zinc finger protein 281##D26361|KIF14|9928|kinesin family member 14##NM_014875|KIF14|9928|kinesin family member 14##AK299219|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC020201|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AL136611|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC014183|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK307569|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC041801|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_001031725|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	0.999863	CTCF.p2:20:1.000
chr17	63290429	63290560	reg1004892.p1	13.770	+	TSC_hg19_v1_chr17_+_63133501 AK309061 AK290535 BC022504 AK301719 AF071476 AK289876 AF493933 AY585191	-156915	+	NM_001081955 NM_001165933 NM_003835 TSC_hg19_v1_chr17_+_63133479	-157024	+	TSC_hg19_v1_chr17_-_63052903 AK301699 NM_006572	-237593	-	BC006295 TSC_hg19_v1_chr17_-_63556453	265981	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	267185	-	CR933657 TSC_hg19_v1_chr17_-_63557767	267274	-	AK309061|RGS9|8787|regulator of G-protein signaling 9##AK290535|RGS9|8787|regulator of G-protein signaling 9##BC022504|RGS9|8787|regulator of G-protein signaling 9##AK301719|RGS9|8787|regulator of G-protein signaling 9##AF071476|RGS9|8787|regulator of G-protein signaling 9##AK289876|RGS9|8787|regulator of G-protein signaling 9##AF493933|RGS9|8787|regulator of G-protein signaling 9##AY585191|RGS9|8787|regulator of G-protein signaling 9##NM_001081955|RGS9|8787|regulator of G-protein signaling 9##NM_001165933|RGS9|8787|regulator of G-protein signaling 9##NM_003835|RGS9|8787|regulator of G-protein signaling 9##AK301699|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_006572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC006295|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##CR933657|AXIN2|8313|axin 2	0.343908	CTCF.p2:-9:0.344
chr4	27012114	27012218	reg1003515.p1	13.769	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-149626	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-426486	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-520181	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3709833	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3710028	+	TSC_hg19_v1_chr4_+_30722465 AB006756	3710293	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.572327	CTCF.p2:-5:0.572
chr9	27726296	27726414	reg1003780.p1	13.769	+	AK057806 JN681271 NM_145005	-152514	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-152884	-	TSC_hg19_v1_chr9_-_27529809 AL832572 BC033027 AK023266 NM_024761	-196705	-	AK056372 NM_152570	992947	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	4658235	+	TSC_hg19_v1_chr9_+_32384622 AK057904	4658272	+	AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##AL832572|MOB3B|79817|MOB kinase activator 3B##BC033027|MOB3B|79817|MOB kinase activator 3B##AK023266|MOB3B|79817|MOB kinase activator 3B##NM_024761|MOB3B|79817|MOB kinase activator 3B##AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble	0.907448	CTCF.p2:-20:0.907
chr12	10715014	10715159	reg1005094.p1	13.768	+	BC012550 NM_213657 NM_213658 AK310992	-107838	-	X54867 X54868 AF461812 NM_002259 NM_007328	-109133	-	BC106069 AK295525 AF260134 AF350017 NM_002260 X54869 Y13055 AF461157 BC093644 BC112039	-126507	-	AB528590 TSC_hg19_v1_chr12_-_10766200 BC010905 AK022720 AK001154 BC000928 AK096106 AF165518 NM_018048	51083	-	AF251059 NM_018423	111804	-	TSC_hg19_v1_chr12_-_10875782 AB463536 DQ892686 DQ895930	160656	-	BC012550|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_213657|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_213658|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##AK310992|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##X54867|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##X54868|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##AF461812|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_002259|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_007328|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##BC010905|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK022720|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK001154|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK096106|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AF165518|MAGOHB|55110|mago-nashi homolog B (Drosophila)##NM_018048|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AF251059|STYK1|55359|serine/threonine/tyrosine kinase 1##NM_018423|STYK1|55359|serine/threonine/tyrosine kinase 1##DQ892686|CSDA|8531|cold shock domain protein A##DQ895930|CSDA|8531|cold shock domain protein A	0.996156	CTCF.p2:21:0.996
chr17	4792457	4792607	reg1003571.p1	13.768	+	TSC_hg19_v1_chr17_+_4736660 NM_001024937 NM_015716 NM_153827 NM_170663 BC034673 AB209450 AB041926 BC094686 DQ891158 DQ894339 AB035698 AY775058	-55787	+	NM_001243108 NM_002663 TSC_hg19_v1_chr17_+_4710443 BC015033 AK304246 AK314797 BC056871	-82086	+	TSC_hg19_v1_chr17_+_4699478 AK311768 D29012 AB464088 BT009809 CR457065 DQ891216 DQ894399	-93051	+	AK309386 AK128415 NM_001145536	10374	+	NM_000080 X66403	13836	-	BC027955 NM_000173 J02940	43075	+	NM_001024937|MINK1|50488|misshapen-like kinase 1##NM_015716|MINK1|50488|misshapen-like kinase 1##NM_153827|MINK1|50488|misshapen-like kinase 1##NM_170663|MINK1|50488|misshapen-like kinase 1##BC034673|MINK1|50488|misshapen-like kinase 1##AB209450|MINK1|50488|misshapen-like kinase 1##AB041926|MINK1|50488|misshapen-like kinase 1##BC094686|MINK1|50488|misshapen-like kinase 1##DQ891158|MINK1|50488|misshapen-like kinase 1##DQ894339|MINK1|50488|misshapen-like kinase 1##AB035698|MINK1|50488|misshapen-like kinase 1##AY775058|MINK1|50488|misshapen-like kinase 1##NM_001243108|PLD2|5338|phospholipase D2##NM_002663|PLD2|5338|phospholipase D2##BC015033|PLD2|5338|phospholipase D2##AK304246|PLD2|5338|phospholipase D2##AK314797|PLD2|5338|phospholipase D2##BC056871|PLD2|5338|phospholipase D2##AK311768|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##D29012|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##BT009809|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##CR457065|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##DQ891216|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##DQ894399|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##AK309386|C17orf107|100130311|chromosome 17 open reading frame 107##AK128415|C17orf107|100130311|chromosome 17 open reading frame 107##NM_001145536|C17orf107|100130311|chromosome 17 open reading frame 107##NM_000080|CHRNE|1145|cholinergic receptor, nicotinic, epsilon##X66403|CHRNE|1145|cholinergic receptor, nicotinic, epsilon##BC027955|GP1BA|2811|glycoprotein Ib (platelet), alpha polypeptide##NM_000173|GP1BA|2811|glycoprotein Ib (platelet), alpha polypeptide##J02940|GP1BA|2811|glycoprotein Ib (platelet), alpha polypeptide	0.999878	CTCF.p2:18:1.000
chr11	113160414	113160542	reg1005004.p1	13.767	+	TSC_hg19_v1_chr11_+_112832281 U63041 AK292453	-328172	+	X16841 TSC_hg19_v1_chr11_+_112832212	-328272	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	-328347	+	NM_017868 AK023921 TSC_hg19_v1_chr11_+_113185315 AK292331 AK091887 BC011546 BC019086 BC032355	24812	+	AJ541797 NM_178510 AF487542	98081	+	S69899 BC021195 NM_000795 NM_016574 M30625	185497	-	U63041|NCAM1|4684|neural cell adhesion molecule 1##AK292453|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##NM_017868|TTC12|54970|tetratricopeptide repeat domain 12##AK023921|TTC12|54970|tetratricopeptide repeat domain 12##AK292331|TTC12|54970|tetratricopeptide repeat domain 12##AK091887|TTC12|54970|tetratricopeptide repeat domain 12##BC011546|TTC12|54970|tetratricopeptide repeat domain 12##BC019086|TTC12|54970|tetratricopeptide repeat domain 12##BC032355|TTC12|54970|tetratricopeptide repeat domain 12##AJ541797|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_178510|ANKK1|255239|ankyrin repeat and kinase domain containing 1##AF487542|ANKK1|255239|ankyrin repeat and kinase domain containing 1##S69899|DRD2|1813|dopamine receptor D2##BC021195|DRD2|1813|dopamine receptor D2##NM_000795|DRD2|1813|dopamine receptor D2##NM_016574|DRD2|1813|dopamine receptor D2##M30625|DRD2|1813|dopamine receptor D2	0.983516	CTCF.p2:17:0.984
chr1	155035274	155035371	reg1002851.p1	13.767	+	TSC_hg19_v1_chr1_+_155023819 AK308172 AK295614 AK296925 AK297468 U41767 EU176173 AB590397 AY518542 BT009764 U46005	-11486	+	BC014566 TSC_hg19_v1_chr1_+_155023791 AK075498	-11530	+	TSC_hg19_v1_chr1_+_155023771 AK000667 AY560593 AY560594 AY560595 AY560596 AY560597 AY560598 AY560599 AY560600 AY560601 AY576417 NM_003815 NM_207191 NM_207194 NM_207195 NM_207196 NM_207197	-11563	+	TSC_hg19_v1_chr1_+_155036206 NM_005227 NM_182689 NM_182690 BC107483 AK301966 AJ006352 AJ006353 U14188 CR533569	928	+	TSC_hg19_v1_chr1_+_155051392 BC017722 NM_004952 BC110406 U14187 AK296030 AK316248 L37360 DQ891668 DQ894854	16018	+	AK057845 TSC_hg19_v1_chr1_+_155099946	64619	+	AK308172|ADAM15|8751|ADAM metallopeptidase domain 15##AK295614|ADAM15|8751|ADAM metallopeptidase domain 15##AK296925|ADAM15|8751|ADAM metallopeptidase domain 15##AK297468|ADAM15|8751|ADAM metallopeptidase domain 15##U41767|ADAM15|8751|ADAM metallopeptidase domain 15##EU176173|ADAM15|8751|ADAM metallopeptidase domain 15##AY518542|ADAM15|8751|ADAM metallopeptidase domain 15##BT009764|ADAM15|8751|ADAM metallopeptidase domain 15##U46005|ADAM15|8751|ADAM metallopeptidase domain 15##BC014566|ADAM15|8751|ADAM metallopeptidase domain 15##AK075498|ADAM15|8751|ADAM metallopeptidase domain 15##AK000667|ADAM15|8751|ADAM metallopeptidase domain 15##AY560593|ADAM15|8751|ADAM metallopeptidase domain 15##AY560594|ADAM15|8751|ADAM metallopeptidase domain 15##AY560595|ADAM15|8751|ADAM metallopeptidase domain 15##AY560596|ADAM15|8751|ADAM metallopeptidase domain 15##AY560597|ADAM15|8751|ADAM metallopeptidase domain 15##AY560598|ADAM15|8751|ADAM metallopeptidase domain 15##AY560599|ADAM15|8751|ADAM metallopeptidase domain 15##AY560600|ADAM15|8751|ADAM metallopeptidase domain 15##AY560601|ADAM15|8751|ADAM metallopeptidase domain 15##AY576417|ADAM15|8751|ADAM metallopeptidase domain 15##NM_003815|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207191|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207194|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207195|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207196|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207197|ADAM15|8751|ADAM metallopeptidase domain 15##NM_005227|EFNA4|1945|ephrin-A4##NM_182689|EFNA4|1945|ephrin-A4##NM_182690|EFNA4|1945|ephrin-A4##BC107483|EFNA4|1945|ephrin-A4##AJ006352|EFNA4|1945|ephrin-A4##AJ006353|EFNA4|1945|ephrin-A4##U14188|EFNA4|1945|ephrin-A4##CR533569|EFNA4|1945|ephrin-A4##BC017722|EFNA3|1944|ephrin-A3##NM_004952|EFNA3|1944|ephrin-A3##BC110406|EFNA3|1944|ephrin-A3##U14187|EFNA3|1944|ephrin-A3##AK296030|EFNA3|1944|ephrin-A3##AK316248|EFNA3|1944|ephrin-A3##L37360|EFNA3|1944|ephrin-A3##DQ891668|EFNA3|1944|ephrin-A3##DQ894854|EFNA3|1944|ephrin-A3##AK057845|EFNA1|1942|ephrin-A1	0.029957	
chr17	62024243	62024347	reg1001599.p2	13.767	+	S52229 S79249 X83539 M80461 BC032651 BC002975 BC030210 AX775815 AX775817 AK222954 AK313583 AK223210 NM_000626 NM_001039933 NM_021602 M89957	-14629	-	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	-28129	-	BC119747 BC029365 NM_001318 NM_022579 NM_022580 NM_022581 AX772828	-35638	-	AY212253 M81758 NM_000334	25943	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	51467	+	NM_000873 TSC_hg19_v1_chr17_-_62084314	60010	-	S52229|CD79B|974|CD79b molecule, immunoglobulin-associated beta##S79249|CD79B|974|CD79b molecule, immunoglobulin-associated beta##X83539|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M80461|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC032651|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC002975|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC030210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775815|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775817|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK222954|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK313583|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK223210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_000626|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_001039933|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_021602|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M89957|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1##BC119747|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BC029365|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_001318|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022579|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022580|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022581|CSHL1|1444|chorionic somatomammotropin hormone-like 1##AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##NM_000873|ICAM2|3384|intercellular adhesion molecule 2	0.995886	CTCF.p2:12:0.996
chr5	180889930	180890063	reg1004904.p1	13.766	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-95719	+	TSC_hg19_v1_chr5_+_180688213 BC016291	-201769	+	AK054802 TSC_hg19_v1_chr5_-_180688115 BC007372 NM_032765 AB209243	-201871	-	None	None	None	None	None	None	None	None	None	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##AK054802|TRIM52|84851|tripartite motif containing 52##BC007372|TRIM52|84851|tripartite motif containing 52##NM_032765|TRIM52|84851|tripartite motif containing 52##AB209243|TRIM52|84851|tripartite motif containing 52	0.899243	CTCF.p2:8:0.883
chr4	139602289	139602395	reg1003381.p2	13.765	+	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	-438978	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-1148700	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-1148750	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	334651	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	403061	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	403269	-	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.999919	CTCF.p2:7:1.000
chr14	59522278	59522386	reg1003480.p1	13.764	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-417586	+	AK302579 NM_001244193 AK310356 AK302718	-615906	+	NM_014749 BC066647	-627601	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	133072	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	409590	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	409724	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.981676	CTCF.p2:13:0.982
chr21	27254232	27254353	reg1004725.p1	13.764	+	S41242 S41243 TSC_hg19_v1_chr21_-_27253245	-1069	-	TSC_hg19_v1_chr21_-_27107965 NM_001003696 NM_001003697 NM_001003701 NM_001003703 NM_001685 BC001178	-146321	-	U13044 TSC_hg19_v1_chr21_+_27107734	-146526	+	TSC_hg19_v1_chr21_-_27372469 X06981 X06982	118187	-	TSC_hg19_v1_chr21_-_27423435 BC018937	169151	-	AK295621 NM_001136016 AK311717	258430	-	S41243|APP|351|amyloid beta (A4) precursor protein##NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa##X06981|APP|351|amyloid beta (A4) precursor protein##X06982|APP|351|amyloid beta (A4) precursor protein##AK295621|APP|351|amyloid beta (A4) precursor protein##NM_001136016|APP|351|amyloid beta (A4) precursor protein##AK311717|APP|351|amyloid beta (A4) precursor protein	0.999682	CTCF.p2:-3:1.000
chr12	15685454	15685592	reg1005175.p1	13.763	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	-209972	+	NM_002848 NM_030667 TSC_hg19_v1_chr12_+_15475264 AB209729	-210263	+	AK311016 BC007997 AK295343 AK313881 NM_001190726 NM_032918	-311173	-	NM_030668 NM_030669 NM_030670 NM_030671 AF152378 AF187042 AF187043 AF187044	13758	+	TSC_hg19_v1_chr12_+_15699551 AK290982	14054	+	TSC_hg19_v1_chr12_-_15815073 AK316134	129617	-	AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AB209729|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK311016|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##BC007997|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK295343|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK313881|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_001190726|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_032918|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK290982|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK316134|EPS8|2059|epidermal growth factor receptor pathway substrate 8	1.023195	CTCF.p2:-14:0.962
chr16	29859946	29860077	reg1003638.p1	13.763	+	TSC_hg19_v1_chr16_+_29831782 AK301130 AK310168 AK298238 AJ291366 AJ291367 AK293302 AK302052 BC015623	-28231	+	NM_005115 NM_017458 TSC_hg19_v1_chr16_+_29831736	-28286	+	TSC_hg19_v1_chr16_+_29827809 BC003640 EF195235 CU678552	-32235	+	AK094468 TSC_hg19_v1_chr16_-_29874513 BC001444 AK222676 AK290632 AF014807 AK300805 AK131349 AK314544 NM_006319	14463	-	CU674276 EU176661 BC000567 AJ245820 AJ245821 AJ245822 AK293675 TSC_hg19_v1_chr16_-_29910597 AY358404 AK299103 NM_001114099 NM_001114100 NM_001243332 NM_001243333 NM_012410 NM_201575	50463	-	NM_181718 BC126319 BC126321 BC144152 HQ258402 BC085011 BC009033	52271	+	AK301130|MVP|9961|major vault protein##AK310168|MVP|9961|major vault protein##AK298238|MVP|9961|major vault protein##AJ291366|MVP|9961|major vault protein##AJ291367|MVP|9961|major vault protein##AK293302|MVP|9961|major vault protein##AK302052|MVP|9961|major vault protein##BC015623|MVP|9961|major vault protein##NM_005115|MVP|9961|major vault protein##NM_017458|MVP|9961|major vault protein##BC003640|C16orf53|79447|chromosome 16 open reading frame 53##EF195235|C16orf53|79447|chromosome 16 open reading frame 53##AK094468|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##BC001444|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AK222676|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AK290632|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AF014807|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AK300805|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AK131349|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AK314544|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##NM_006319|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##EU176661|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##BC000567|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##AJ245820|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##AJ245821|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##AJ245822|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##AK293675|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##AY358404|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##AK299103|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_001114099|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_001114100|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_001243332|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_001243333|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_012410|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_201575|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_181718|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##BC126319|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##BC126321|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##BC144152|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##HQ258402|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##BC085011|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##BC009033|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1	0.995639	CTCF.p2:4:0.996
chr22	48888295	48888417	reg1004288.p1	13.763	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	-3076	+	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	-860853	+	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	-1729756	+	AK125256 NM_015381 AK123443 AY358847	83805	+	AK124962 TSC_hg19_v1_chr22_-_50051168 BC033837 BC048207	1162777	-	AF005067 NM_014577	1330095	-	NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK093107|LOC284930|284930|uncharacterized LOC284930##NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK124962|C22orf34|348645|chromosome 22 open reading frame 34##BC048207|C22orf34|348645|chromosome 22 open reading frame 34##AF005067|BRD1|23774|bromodomain containing 1##NM_014577|BRD1|23774|bromodomain containing 1	0.035374	
chr6	44119707	44119834	reg1004063.p1	13.763	+	TSC_hg19_v1_chr6_+_44095393 AK093629 AX748232 NM_018426 AK309791	-24364	+	TSC_hg19_v1_chr6_-_44095190 NM_032111	-24572	-	TSC_hg19_v1_chr6_-_44095161 AK312086	-24610	-	NM_007058 AK314054 BC033733	6791	+	NM_001078174 NM_004955 TSC_hg19_v1_chr6_+_44187322 BC095398 AK090491 AK304285 AX746476 AB490708 AX775997 U81375 AF079117	67586	+	TSC_hg19_v1_chr6_+_44191331 NM_001078175 NM_001078176 BC001382 AK293558 BC008954 NM_001078177	71573	+	AK093629|TMEM63B|55362|transmembrane protein 63B##NM_018426|TMEM63B|55362|transmembrane protein 63B##AK309791|TMEM63B|55362|transmembrane protein 63B##NM_032111|MRPL14|64928|mitochondrial ribosomal protein L14##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14##NM_007058|CAPN11|11131|calpain 11##AK314054|CAPN11|11131|calpain 11##BC033733|CAPN11|11131|calpain 11##NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AX775997|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078175|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078176|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC001382|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK293558|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC008954|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078177|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	0.999742	CTCF.p2:16:1.000
chr12	656197	656336	reg1004250.p1	13.761	+	AB089940 NM_173593	-86724	+	NM_001130146 NM_032358 AK293165 TSC_hg19_v1_chr12_+_510809 AK027638	-145485	+	TSC_hg19_v1_chr12_-_498451 AK301150 AK301273 AB209999 BC048307 BC053893 NM_001042603 BC092417	-157664	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	95912	+	TSC_hg19_v1_chr12_-_752800 AK298043	96553	-	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	116449	-	AB089940|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_173593|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_001130146|CCDC77|84318|coiled-coil domain containing 77##NM_032358|CCDC77|84318|coiled-coil domain containing 77##AK293165|CCDC77|84318|coiled-coil domain containing 77##AK027638|CCDC77|84318|coiled-coil domain containing 77##AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A##AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A##AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A##BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A##BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A##NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A##BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2	0.999691	CTCF.p2:19:1.000
chr6	134385083	134385218	reg1004651.p1	13.761	+	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	-11447	-	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	-110805	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	-111786	+	CU674630 Y10032 AF153609 BC001263 FM205710 TSC_hg19_v1_chr6_-_134496003 AK098509 AK295422 BX649005	110824	-	TSC_hg19_v1_chr6_-_134496010 NM_005627	110869	-	FM205707 TSC_hg19_v1_chr6_-_134496850	111711	-	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1##Y10032|SGK1|6446|serum/glucocorticoid regulated kinase 1##AF153609|SGK1|6446|serum/glucocorticoid regulated kinase 1##BC001263|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205710|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK098509|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK295422|SGK1|6446|serum/glucocorticoid regulated kinase 1##BX649005|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_005627|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205707|SGK1|6446|serum/glucocorticoid regulated kinase 1	0.725425	CTCF.p2:6:0.406	CTCF.p2:53:0.319
chr5	150505816	150505945	reg1003577.p1	13.760	+	AK290999 NM_001252390	-38660	-	BC014008 AB252970 AB252971 AB252974 AB252982 AJ011895 AJ011896 AK298685 NM_001252391 NM_001252392	-39159	-	TSC_hg19_v1_chr5_-_150460599 AB252972 AB252973 AB252975 NM_001252385 NM_001252386 NM_001252393 NM_006058 AY012155	-45257	-	AK303078 NM_001193544	15327	-	J03578 BC017046 TSC_hg19_v1_chr5_-_150537299	31401	-	TSC_hg19_v1_chr5_-_150537327 AK126836 AK290672 AK130077 Y00097 AK298582	31439	-	AK290999|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252390|TNIP1|10318|TNFAIP3 interacting protein 1##BC014008|TNIP1|10318|TNFAIP3 interacting protein 1##AB252970|TNIP1|10318|TNFAIP3 interacting protein 1##AB252971|TNIP1|10318|TNFAIP3 interacting protein 1##AB252982|TNIP1|10318|TNFAIP3 interacting protein 1##AJ011895|TNIP1|10318|TNFAIP3 interacting protein 1##AJ011896|TNIP1|10318|TNFAIP3 interacting protein 1##AK298685|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252391|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252392|TNIP1|10318|TNFAIP3 interacting protein 1##AB252972|TNIP1|10318|TNFAIP3 interacting protein 1##AB252973|TNIP1|10318|TNFAIP3 interacting protein 1##AB252975|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252385|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252386|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252393|TNIP1|10318|TNFAIP3 interacting protein 1##NM_006058|TNIP1|10318|TNFAIP3 interacting protein 1##AY012155|TNIP1|10318|TNFAIP3 interacting protein 1##AK303078|ANXA6|309|annexin A6##NM_001193544|ANXA6|309|annexin A6##J03578|ANXA6|309|annexin A6##BC017046|ANXA6|309|annexin A6##AK126836|ANXA6|309|annexin A6##AK290672|ANXA6|309|annexin A6##AK130077|ANXA6|309|annexin A6##Y00097|ANXA6|309|annexin A6##AK298582|ANXA6|309|annexin A6	0.992388	CTCF.p2:-8:0.992
chr17	76247113	76247233	reg1003090.p1	13.759	+	BC042066 NM_001204210 NM_001204211 NM_001204212 BC148207	-19710	+	TSC_hg19_v1_chr17_+_76210353 AK223428 BC000784 BC034148 AY927772 BC002388 BC008718 HM625836 AB028869 AF077350 AK311917 BC065497 AB590059 AM393128 AB154416 AY830084 CR541740 DQ227257 DQ310375 DQ310376 DQ310377 DQ310378 DQ310379 DQ508249 DQ508245 DQ508246 DQ508247 DQ508248	-36776	+	NM_001012270 NM_001012271 NM_001168 TSC_hg19_v1_chr17_+_76210320 AK301793	-36874	+	TSC_hg19_v1_chr17_-_76356159 AK309756 AK314212 BC060858 NM_003955	108984	-	TSC_hg19_v1_chr17_+_76374729 AK316147 AK307874 AK296882 AK024529 AK225030 AK316405 BC108732 NM_024419 BC035662 AK297156 BC008903 BC015570 BC025951	127557	+	NM_173628	326302	-	BC042066|TMEM235|283999|transmembrane protein 235##NM_001204210|TMEM235|283999|transmembrane protein 235##NM_001204211|TMEM235|283999|transmembrane protein 235##NM_001204212|TMEM235|283999|transmembrane protein 235##BC148207|TMEM235|283999|transmembrane protein 235##AK223428|BIRC5|332|baculoviral IAP repeat containing 5##BC000784|BIRC5|332|baculoviral IAP repeat containing 5##BC034148|BIRC5|332|baculoviral IAP repeat containing 5##AY927772|BIRC5|332|baculoviral IAP repeat containing 5##BC008718|BIRC5|332|baculoviral IAP repeat containing 5##HM625836|BIRC5|332|baculoviral IAP repeat containing 5##AB028869|BIRC5|332|baculoviral IAP repeat containing 5##AF077350|BIRC5|332|baculoviral IAP repeat containing 5##AK311917|BIRC5|332|baculoviral IAP repeat containing 5##BC065497|BIRC5|332|baculoviral IAP repeat containing 5##AM393128|BIRC5|332|baculoviral IAP repeat containing 5##AB154416|BIRC5|332|baculoviral IAP repeat containing 5##AY830084|BIRC5|332|baculoviral IAP repeat containing 5##CR541740|BIRC5|332|baculoviral IAP repeat containing 5##DQ227257|BIRC5|332|baculoviral IAP repeat containing 5##DQ310375|BIRC5|332|baculoviral IAP repeat containing 5##DQ310376|BIRC5|332|baculoviral IAP repeat containing 5##DQ310377|BIRC5|332|baculoviral IAP repeat containing 5##DQ310378|BIRC5|332|baculoviral IAP repeat containing 5##DQ310379|BIRC5|332|baculoviral IAP repeat containing 5##DQ508249|BIRC5|332|baculoviral IAP repeat containing 5##DQ508245|BIRC5|332|baculoviral IAP repeat containing 5##DQ508246|BIRC5|332|baculoviral IAP repeat containing 5##DQ508247|BIRC5|332|baculoviral IAP repeat containing 5##DQ508248|BIRC5|332|baculoviral IAP repeat containing 5##NM_001012270|BIRC5|332|baculoviral IAP repeat containing 5##NM_001012271|BIRC5|332|baculoviral IAP repeat containing 5##NM_001168|BIRC5|332|baculoviral IAP repeat containing 5##AK301793|BIRC5|332|baculoviral IAP repeat containing 5##AK309756|SOCS3|9021|suppressor of cytokine signaling 3##AK314212|SOCS3|9021|suppressor of cytokine signaling 3##BC060858|SOCS3|9021|suppressor of cytokine signaling 3##NM_003955|SOCS3|9021|suppressor of cytokine signaling 3##AK316147|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK307874|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK296882|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK024529|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK225030|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK316405|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC108732|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_024419|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC035662|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK297156|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC008903|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC015570|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC025951|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17	1.920027	CTCF.p2:31:0.920	CTCF.p2:-44:1.000
chr11	27318073	27318208	reg1004729.p1	13.758	+	NM_003986	-255632	+	TSC_hg19_v1_chr11_+_27015837 BC026873	-302296	+	TSC_hg19_v1_chr11_+_27015673 AK310616	-302470	+	AF382034 TSC_hg19_v1_chr11_-_27384763 AY598334 CU678989 AK313358 BC008496 AK308494 NM_030771 NM_080654	66626	-	TSC_hg19_v1_chr11_-_27494323 AB209743 AF257182 BC033039 NM_018490	176164	-	AB385247 BC053907 TSC_hg19_v1_chr11_-_27528315 BC009774 AK223156 AL833601 AK002077 NM_018362	210172	-	NM_003986|BBOX1|8424|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1##BC026873|FIBIN|387758|fin bud initiation factor homolog (zebrafish)##AF382034|CCDC34|91057|coiled-coil domain containing 34##AY598334|CCDC34|91057|coiled-coil domain containing 34##AK313358|CCDC34|91057|coiled-coil domain containing 34##BC008496|CCDC34|91057|coiled-coil domain containing 34##AK308494|CCDC34|91057|coiled-coil domain containing 34##NM_030771|CCDC34|91057|coiled-coil domain containing 34##NM_080654|CCDC34|91057|coiled-coil domain containing 34##AB209743|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF257182|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC033039|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##NM_018490|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)##BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)##AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)##AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)##AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)##NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)	0.564664	CTCF.p2:2:0.565
chr1	17933469	17933575	reg1003215.p2	13.758	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	-26507	+	TSC_hg19_v1_chr1_+_17866365 AB046846 NM_018125 AK311076	-67162	+	TSC_hg19_v1_chr1_+_17846826 AK129959	-86699	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	11343	+	AK057339 NM_030812 BC028909 U20582	148324	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	500755	+	NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AB046846|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_018125|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK311076|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK129959|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21	0.992627	CTCF.p2:4:0.993
chr7	20638248	20638388	reg1004424.p1	13.758	+	BC002630 NM_002214 M73780	-267584	+	AK295044 TSC_hg19_v1_chr7_+_20370337	-267981	+	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	-381338	-	AB353947 NM_001163941 AY230001	16979	+	AY851364 BC110370 NM_001163942 NM_001163993 NM_178559 BC044248 AY090613 AY234788 AY851365 BC104894 BC104920	48773	+	TSC_hg19_v1_chr7_-_20825382 AB464710	187064	-	BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8##AK295044|ITGB8|3696|integrin, beta 8##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##AB353947|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163941|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY230001|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY851364|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC110370|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163942|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163993|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_178559|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC044248|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY090613|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY234788|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY851365|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC104894|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC104920|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	0.618356	CTCF.p2:29:0.618
chr11	128729857	128729976	reg1004173.p1	13.757	+	BC136360 BC136361 BC074752 NM_000220 U12541 AK314267 AK290797	-17538	-	TSC_hg19_v1_chr11_+_128564132 AB385119 AY029368 CU674822 DQ892582 DQ896858	-165774	+	TSC_hg19_v1_chr11_+_128563997 X67001 S45205 BC010115 BC001670	-165861	+	U12544 U12545 AK308032 U12543 U03884 AK308033 BC063109 NM_153764 NM_153765 NM_153766 NM_153767 U12542	7283	-	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	31424	+	DQ891644 DQ894833 TSC_hg19_v1_chr11_-_128774571	44613	-	BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AY029368|FLI1|2313|Friend leukemia virus integration 1##DQ892582|FLI1|2313|Friend leukemia virus integration 1##DQ896858|FLI1|2313|Friend leukemia virus integration 1##X67001|FLI1|2313|Friend leukemia virus integration 1##S45205|FLI1|2313|Friend leukemia virus integration 1##BC010115|FLI1|2313|Friend leukemia virus integration 1##BC001670|FLI1|2313|Friend leukemia virus integration 1##U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##DQ891644|C11orf45|219833|chromosome 11 open reading frame 45##DQ894833|C11orf45|219833|chromosome 11 open reading frame 45	0.51908	CTCF.p2:10:0.468
chr2	42890392	42890519	reg1004560.p1	13.754	+	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-94558	+	TSC_hg19_v1_chr2_+_42795781 BC053631 NM_020744 BC004227	-94734	+	TSC_hg19_v1_chr2_+_42721701 AK127245	-168753	+	AY158687 AB528920 AB083055 BC063549 NM_148962	100845	-	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	129296	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	562890	-	AK027304|MTA3|57504|metastasis associated 1 family, member 3##BC053631|MTA3|57504|metastasis associated 1 family, member 3##NM_020744|MTA3|57504|metastasis associated 1 family, member 3##BC004227|MTA3|57504|metastasis associated 1 family, member 3##AK127245|MTA3|57504|metastasis associated 1 family, member 3##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.392867	CTCF.p2:10:0.393
chr1	157550108	157550251	reg1005362.p1	13.753	+	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	-27949	-	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-441896	-	TSC_hg19_v1_chr1_-_157108158 L16464	-442029	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	17622	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	120348	-	CU686705 AK301113 AY043465 AF459633 AY358130 AK303549 BC069185 NM_030764	196713	-	AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3##AK301113|FCRL2|79368|Fc receptor-like 2##AY043465|FCRL2|79368|Fc receptor-like 2##AF459633|FCRL2|79368|Fc receptor-like 2##AY358130|FCRL2|79368|Fc receptor-like 2##AK303549|FCRL2|79368|Fc receptor-like 2##BC069185|FCRL2|79368|Fc receptor-like 2##NM_030764|FCRL2|79368|Fc receptor-like 2	0.915257	CTCF.p2:-5:0.915
chr13	103109804	103109941	reg1005543.p1	13.753	+	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	-55797	-	NM_004115 U66200	-540878	-	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	-1004877	+	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	139464	+	HQ258371 NM_001010977 BC132748 BC132750	236986	-	NM_001146197	301549	-	BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_004115|FGF14|2259|fibroblast growth factor 14##U66200|FGF14|2259|fibroblast growth factor 14##AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II##HQ258371|METTL21C|196541|methyltransferase like 21C##NM_001010977|METTL21C|196541|methyltransferase like 21C##BC132748|METTL21C|196541|methyltransferase like 21C##BC132750|METTL21C|196541|methyltransferase like 21C##NM_001146197|CCDC168|643677|coiled-coil domain containing 168	0.36735	CTCF.p2:-8:0.258
chr17	58111932	58112077	reg1004870.p1	13.753	+	BC006971 TSC_hg19_v1_chr17_-_58042099 AK294806 AK296197 NM_016125	-69897	-	TSC_hg19_v1_chr17_-_58042085 AK295162 BC088365	-69926	-	TSC_hg19_v1_chr17_+_57970492 AK300202 AK312875 BC053365 M60724 AB384946 CU690966 AK297147	-141462	+	TSC_hg19_v1_chr17_-_58156283 AK127708 AK314655 BC119771 BC119813 BX640819 BX640831 CR627418 NM_022070 AF349752	44350	-	TSC_hg19_v1_chr17_-_58213006 AK311448	101007	-	TSC_hg19_v1_chr17_+_58227302 BC057792 NM_000717 AK289715 AK298710	115286	+	BC006971|RNFT1|51136|ring finger protein, transmembrane 1##AK294806|RNFT1|51136|ring finger protein, transmembrane 1##AK296197|RNFT1|51136|ring finger protein, transmembrane 1##NM_016125|RNFT1|51136|ring finger protein, transmembrane 1##AK295162|RNFT1|51136|ring finger protein, transmembrane 1##BC088365|RNFT1|51136|ring finger protein, transmembrane 1##AK300202|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK312875|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC053365|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##M60724|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK297147|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK127708|HEATR6|63897|HEAT repeat containing 6##AK314655|HEATR6|63897|HEAT repeat containing 6##BC119771|HEATR6|63897|HEAT repeat containing 6##BC119813|HEATR6|63897|HEAT repeat containing 6##BX640819|HEATR6|63897|HEAT repeat containing 6##BX640831|HEATR6|63897|HEAT repeat containing 6##CR627418|HEATR6|63897|HEAT repeat containing 6##NM_022070|HEATR6|63897|HEAT repeat containing 6##AF349752|HEATR6|63897|HEAT repeat containing 6##BC057792|CA4|762|carbonic anhydrase IV##NM_000717|CA4|762|carbonic anhydrase IV##AK289715|CA4|762|carbonic anhydrase IV##AK298710|CA4|762|carbonic anhydrase IV	0.989419	CTCF.p2:12:0.989
chr1	107819718	107819849	reg1005367.p1	13.752	+	AB023193 TSC_hg19_v1_chr1_+_107683657	-136179	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-137041	+	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	-220418	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	411341	-	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	687817	-	AJ619961 NM_213651 AK292567	915613	-	AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.877557	CTCF.p2:-10:0.878
chr1	113351959	113352082	reg1003286.p2	13.752	+	NM_001004440 NM_182759 BC112268 BC117479 BC143949 BC144042 BC144043 AY325116 AY325119	-88827	+	BC011803 BC064628 AL133644 AB527803 EU832164 EU832258 AK093270 AX748024 BC073828 NM_005167	-94109	-	TSC_hg19_v1_chr1_-_113250031 NM_001042678 NM_175744	-101994	-	BC045664 AK094064 NM_001166496 AF239919 AL162079 TSC_hg19_v1_chr1_-_113498818 AK296688 AK312500 BC026317	146697	-	TSC_hg19_v1_chr1_-_113498861 AK303603 AJ438943 NM_003051	146881	-	TSC_hg19_v1_chr1_+_113499054 BC023568 BC047723 BC062295 BX648855	147013	+	NM_001004440|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##NM_182759|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC112268|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC117479|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC143949|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144042|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144043|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325116|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325119|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC011803|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC064628|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AL133644|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832164|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832258|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AK093270|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC073828|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_005167|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_001042678|RHOC|389|ras homolog gene family, member C##NM_175744|RHOC|389|ras homolog gene family, member C##BC045664|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK094064|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_001166496|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AF239919|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AL162079|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK296688|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK312500|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC026317|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK303603|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AJ438943|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_003051|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC062295|LOC100506392|100506392|uncharacterized LOC100506392##BX648855|LOC100506392|100506392|uncharacterized LOC100506392	0.227628	CTCF.p2:-5:0.228
chr12	55387143	55387283	reg1003728.p1	13.752	+	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	-8711	-	BC132732 BC132734 NM_001098815	-11592	-	NM_058173 AF414087 AY359062 BC111421 AY651259	-138881	+	NM_021191 AK314136	26557	+	BC136988 NM_001005243	136295	+	AB529271 NM_001005280	227595	+	AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1##NM_021191|NEUROD4|58158|neurogenic differentiation 4##AK314136|NEUROD4|58158|neurogenic differentiation 4##BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7	0.999849	CTCF.p2:-7:1.000
chr13	24594591	24594708	reg1003160.p1	13.752	+	TSC_hg19_v1_chr13_+_24553943 BX648244 BC043582	-40716	+	BX648445 TSC_hg19_v1_chr13_+_24553892	-40784	+	NM_001007537 CU691876 BC137004 BC137006 BC144450	-123491	-	TSC_hg19_v1_chr13_+_24734858 AK092754 AX747708 NM_001166271 NM_153023 AK055770	140246	+	AK299981 AK301149 TSC_hg19_v1_chr13_+_24825840	231186	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	250249	+	BX648244|SPATA13|221178|spermatogenesis associated 13##NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##AK092754|SPATA13|221178|spermatogenesis associated 13##NM_001166271|SPATA13|221178|spermatogenesis associated 13##NM_153023|SPATA13|221178|spermatogenesis associated 13##AK055770|SPATA13|221178|spermatogenesis associated 13##AK299981|SPATA13|221178|spermatogenesis associated 13##AK301149|SPATA13|221178|spermatogenesis associated 13##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13	0.0	
chr7	144028715	144028853	reg1004437.p1	13.752	+	NM_001001802 NM_001005287	-13567	+	CR749203 TSC_hg19_v1_chr7_-_143991278	-37517	-	AK292236 NM_198495	-62399	-	AK160365 TSC_hg19_v1_chr7_+_144052469 NM_005435 CR749203 BC136661	23719	+	NM_001080413 AB528776	78535	-	TSC_hg19_v1_chr7_-_144533086 AK091736	504305	-	NM_001001802|OR2A42|402317|olfactory receptor, family 2, subfamily A, member 42##NM_001005287|OR2A1|346528|olfactory receptor, family 2, subfamily A, member 1##CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##AK292236|CTAGE8|100142659|CTAGE family, member 8##NM_198495|CTAGE4|100128553|CTAGE family, member 4##AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##AK091736|TPK1|27010|thiamin pyrophosphokinase 1	0.984222	CTCF.p2:-11:0.984
chrX	25162280	25162430	reg1005864.p1	13.752	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-128282	-	BC169334 TSC_hg19_v1_chrX_-_25031209	-131162	-	NM_016937 X06745 TSC_hg19_v1_chrX_+_24712066	-450290	+	NM_173699 BC029525 AK057361	994131	+	AK097561 BC067286 NM_173523	1048201	+	BC157859 NM_001136533	2602570	+	NM_139058|ARX|170302|aristaless related homeobox##BC169334|ARX|170302|aristaless related homeobox##NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2	0.998556	CTCF.p2:-3:0.999
chr2	70369902	70370031	reg1004294.p1	13.751	+	TSC_hg19_v1_chr2_+_70314983 BC013020	-54968	+	AK130439 TSC_hg19_v1_chr2_+_70314932	-55049	+	TSC_hg19_v1_chr2_+_70314854 Z29505 X78137 AB464656 CU691762	-55139	+	TSC_hg19_v1_chr2_-_70418137 BC002825 BC005079 AK000565 NM_017880	48155	-	CU677529 AB528896 BC015944 M77142 TSC_hg19_v1_chr2_-_70475711 NM_022037 NM_022173 AK303345	105753	-	TSC_hg19_v1_chr2_+_70485278 NM_016297 AF181490 BC051891 AY359063 BC033815 AK314453 AK225302 AK303043 BC022259 AB020715 DQ890801 DQ893956 CU689758	115284	+	AK130439|PCBP1|5093|poly(rC) binding protein 1##Z29505|PCBP1|5093|poly(rC) binding protein 1##X78137|PCBP1|5093|poly(rC) binding protein 1##BC002825|C2orf42|54980|chromosome 2 open reading frame 42##BC005079|C2orf42|54980|chromosome 2 open reading frame 42##AK000565|C2orf42|54980|chromosome 2 open reading frame 42##NM_017880|C2orf42|54980|chromosome 2 open reading frame 42##BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_016297|PCYOX1|51449|prenylcysteine oxidase 1##AF181490|PCYOX1|51449|prenylcysteine oxidase 1##BC051891|PCYOX1|51449|prenylcysteine oxidase 1##AY359063|PCYOX1|51449|prenylcysteine oxidase 1##BC033815|PCYOX1|51449|prenylcysteine oxidase 1##AK314453|PCYOX1|51449|prenylcysteine oxidase 1##AK225302|PCYOX1|51449|prenylcysteine oxidase 1##AK303043|PCYOX1|51449|prenylcysteine oxidase 1##BC022259|PCYOX1|51449|prenylcysteine oxidase 1##AB020715|PCYOX1|51449|prenylcysteine oxidase 1##DQ890801|PCYOX1|51449|prenylcysteine oxidase 1##DQ893956|PCYOX1|51449|prenylcysteine oxidase 1	0.866882	CTCF.p2:0:0.844
chr4	48965184	48965331	reg1003846.p2	13.750	+	TSC_hg19_v1_chr4_-_48908795 CR749310 BC032808 AK298305 NM_001014446 NM_152398	-56478	-	TSC_hg19_v1_chr4_+_48833104 NM_001079840 NM_001079841 NM_017830 AK297864 AF323665 AF324350 AK000462 BC003409 NM_001079839 NM_001079842 NM_001168254 BC088361	-132006	+	TSC_hg19_v1_chr4_-_48782286 BC040987 BC050336 NM_015030	-182959	-	AK025164 NM_025087 BC137387 BC137388	23015	+	AK124346 NM_001040402 NM_015115 TSC_hg19_v1_chr4_+_52709318 BC053897 AK294896 BX537944 AK027051 D87466 BC041702 AM392554 AM392637 AM392729 AM393240	3744029	+	CR749811 NM_001024611	3918528	-	CR749310|OCIAD2|132299|OCIA domain containing 2##BC032808|OCIAD2|132299|OCIA domain containing 2##AK298305|OCIAD2|132299|OCIA domain containing 2##NM_001014446|OCIAD2|132299|OCIA domain containing 2##NM_152398|OCIAD2|132299|OCIA domain containing 2##NM_001079840|OCIAD1|54940|OCIA domain containing 1##NM_001079841|OCIAD1|54940|OCIA domain containing 1##NM_017830|OCIAD1|54940|OCIA domain containing 1##AK297864|OCIAD1|54940|OCIA domain containing 1##AF323665|OCIAD1|54940|OCIA domain containing 1##AF324350|OCIAD1|54940|OCIA domain containing 1##AK000462|OCIAD1|54940|OCIA domain containing 1##BC003409|OCIAD1|54940|OCIA domain containing 1##NM_001079839|OCIAD1|54940|OCIA domain containing 1##NM_001079842|OCIAD1|54940|OCIA domain containing 1##NM_001168254|OCIAD1|54940|OCIA domain containing 1##BC088361|OCIAD1|54940|OCIA domain containing 1##BC040987|FRYL|285527|FRY-like##BC050336|FRYL|285527|FRY-like##NM_015030|FRYL|285527|FRY-like##AK025164|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##NM_025087|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137387|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137388|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##CR749811|LRRC66|339977|leucine rich repeat containing 66##NM_001024611|LRRC66|339977|leucine rich repeat containing 66	1.062816	CTCF.p2:-21:1.000
chr16	19514076	19514210	reg1004031.p1	13.749	+	AY236494 NM_024780 BC038118 AK097718 BC027602 AK131202	-46339	+	BC070101 NM_001105248 NM_001105249	-92087	+	TSC_hg19_v1_chr16_+_19179561 NM_016524 BC004518 AF220560 AB527504 CU678742	-334392	+	AY463154 BC014981 TSC_hg19_v1_chr16_-_19533421 AF306698 BC025273 BC001538 AF212862 BC012153 AK312912 NM_016641	19233	-	NM_001199022 NM_014711 TSC_hg19_v1_chr16_+_19535277 BC036654 AK300426 AB007879 CR749255 BC030223	21088	+	AK294885 NM_020314	52593	+	AY236494|TMC5|79838|transmembrane channel-like 5##NM_024780|TMC5|79838|transmembrane channel-like 5##BC038118|TMC5|79838|transmembrane channel-like 5##AK097718|TMC5|79838|transmembrane channel-like 5##BC027602|TMC5|79838|transmembrane channel-like 5##AK131202|TMC5|79838|transmembrane channel-like 5##BC070101|TMC5|79838|transmembrane channel-like 5##NM_001105248|TMC5|79838|transmembrane channel-like 5##NM_001105249|TMC5|79838|transmembrane channel-like 5##NM_016524|SYT17|51760|synaptotagmin XVII##BC004518|SYT17|51760|synaptotagmin XVII##AF220560|SYT17|51760|synaptotagmin XVII##AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1##NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1##NM_001199022|CCP110|9738|centriolar coiled coil protein 110kDa##NM_014711|CCP110|9738|centriolar coiled coil protein 110kDa##BC036654|CCP110|9738|centriolar coiled coil protein 110kDa##AK300426|CCP110|9738|centriolar coiled coil protein 110kDa##AB007879|CCP110|9738|centriolar coiled coil protein 110kDa##CR749255|CCP110|9738|centriolar coiled coil protein 110kDa##BC030223|CCP110|9738|centriolar coiled coil protein 110kDa##AK294885|C16orf62|57020|chromosome 16 open reading frame 62##NM_020314|C16orf62|57020|chromosome 16 open reading frame 62	0.992513	CTCF.p2:13:0.993
chr5	148414960	148415083	reg1004975.p1	13.748	+	NM_000024 TSC_hg19_v1_chr5_+_148206185 AK313151 BC012481 AK223025 BC073856 BC063486 X04827	-208835	+	AK308471 TSC_hg19_v1_chr5_-_148034091	-380931	-	AJ131724 TSC_hg19_v1_chr5_-_148033739 NM_000870	-381294	-	AB075865 AL832651 AK300420 TSC_hg19_v1_chr5_-_148442626 BC113879 BC114486 AY341075 AB070620 NM_024577	27650	-	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	106169	+	TSC_hg19_v1_chr5_+_148651421 NM_001146337 NM_152406 BC040723	236393	+	NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface##X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131724|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000870|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3##NM_001146337|AFAP1L1|134265|actin filament associated protein 1-like 1##NM_152406|AFAP1L1|134265|actin filament associated protein 1-like 1##BC040723|AFAP1L1|134265|actin filament associated protein 1-like 1	0.66416	CTCF.p2:15:0.664
chr7	142937805	142937931	reg1005156.p1	13.748	+	BC101795 BC101797 NM_176882	-18718	+	BC100947 BC100948 BC114952 NM_176881	-57357	+	BC010950 AK312227 BC010951 NM_002652 Y10179 J03460	-108692	+	TSC_hg19_v1_chr7_+_142960563 NM_001143679 NM_001143680 NM_001143681 NM_015917 AK295592 AL136938 AF087849 AY520571 AF070657 AK000640 BC001231 AK095263 AK289580	22676	+	AK289570 TSC_hg19_v1_chr7_+_142960593 BC063425 AM393732 BC050715 AK299968 AB528144 CR533445	22733	+	NM_001242773 NM_001242774 NM_001242775 NM_001242776 NM_001242777 NM_153345 AK315170 AK075067 AK027352 AK172816 BC035517	44182	+	BC101795|TAS2R40|259286|taste receptor, type 2, member 40##BC101797|TAS2R40|259286|taste receptor, type 2, member 40##NM_176882|TAS2R40|259286|taste receptor, type 2, member 40##BC100947|TAS2R39|259285|taste receptor, type 2, member 39##BC100948|TAS2R39|259285|taste receptor, type 2, member 39##BC114952|TAS2R39|259285|taste receptor, type 2, member 39##NM_176881|TAS2R39|259285|taste receptor, type 2, member 39##BC010950|PIP|5304|prolactin-induced protein##AK312227|PIP|5304|prolactin-induced protein##BC010951|PIP|5304|prolactin-induced protein##NM_002652|PIP|5304|prolactin-induced protein##Y10179|PIP|5304|prolactin-induced protein##J03460|PIP|5304|prolactin-induced protein##NM_001143679|GSTK1|373156|glutathione S-transferase kappa 1##NM_001143680|GSTK1|373156|glutathione S-transferase kappa 1##NM_001143681|GSTK1|373156|glutathione S-transferase kappa 1##NM_015917|GSTK1|373156|glutathione S-transferase kappa 1##AK295592|GSTK1|373156|glutathione S-transferase kappa 1##AL136938|GSTK1|373156|glutathione S-transferase kappa 1##AF087849|GSTK1|373156|glutathione S-transferase kappa 1##AY520571|GSTK1|373156|glutathione S-transferase kappa 1##AF070657|GSTK1|373156|glutathione S-transferase kappa 1##AK000640|GSTK1|373156|glutathione S-transferase kappa 1##BC001231|GSTK1|373156|glutathione S-transferase kappa 1##AK095263|GSTK1|373156|glutathione S-transferase kappa 1##AK289580|GSTK1|373156|glutathione S-transferase kappa 1##AK289570|GSTK1|373156|glutathione S-transferase kappa 1##BC063425|GSTK1|373156|glutathione S-transferase kappa 1##AM393732|GSTK1|373156|glutathione S-transferase kappa 1##BC050715|GSTK1|373156|glutathione S-transferase kappa 1##AK299968|GSTK1|373156|glutathione S-transferase kappa 1##CR533445|GSTK1|373156|glutathione S-transferase kappa 1##NM_001242773|TMEM139|135932|transmembrane protein 139##NM_001242774|TMEM139|135932|transmembrane protein 139##NM_001242775|TMEM139|135932|transmembrane protein 139##NM_001242776|TMEM139|135932|transmembrane protein 139##NM_001242777|TMEM139|135932|transmembrane protein 139##NM_153345|TMEM139|135932|transmembrane protein 139##AK315170|TMEM139|135932|transmembrane protein 139##AK075067|TMEM139|135932|transmembrane protein 139##AK172816|TMEM139|135932|transmembrane protein 139##BC035517|TMEM139|135932|transmembrane protein 139	0.978806	CTCF.p2:-8:0.979
chrX	151801056	151801199	reg1006156.p1	13.748	+	S62908 TSC_hg19_v1_chrX_-_151619798 BC028629 NM_000808	-181378	-	AY522506 BC004105 AK314161 NM_001011543 NM_001204811 NM_001251828 NM_021048	-494123	-	BC109187 NM_021049	-514717	-	AF189259 BC109210 BC109211 NM_018558 AF144648	5526	+	NM_005363 NM_175868 AK289437 BC067731 BC041599 BC109188 BX640600	66144	+	NM_001129826 BC119734 BC119735 AF080246 AF136715 NM_001080848 NM_001129828 NM_004909	76580	-	S62908|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3##BC028629|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3##NM_000808|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3##BC004105|MAGEA10|4109|melanoma antigen family A, 10##AK314161|MAGEA10|4109|melanoma antigen family A, 10##NM_001011543|MAGEA10|4109|melanoma antigen family A, 10##NM_001204811|MAGEA10-MAGEA5|100533997|MAGEA10-MAGEA5 readthrough##NM_001251828|MAGEA10|4109|melanoma antigen family A, 10##NM_021048|MAGEA10|4109|melanoma antigen family A, 10##BC109187|MAGEA5|4104|melanoma antigen family A, 5##NM_021049|MAGEA5|4104|melanoma antigen family A, 5##AF189259|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##BC109210|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##BC109211|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##NM_018558|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##AF144648|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##NM_005363|MAGEA6|4105|melanoma antigen family A, 6##NM_175868|MAGEA6|4105|melanoma antigen family A, 6##AK289437|MAGEA6|4105|melanoma antigen family A, 6##BC067731|MAGEA6|4105|melanoma antigen family A, 6##BC041599|MAGEA6|4105|melanoma antigen family A, 6##BC109188|MAGEA2|4101|melanoma antigen family A, 2##BX640600|MAGEA6|4105|melanoma antigen family A, 6##NM_001129826|CSAG3|389903|CSAG family, member 3##BC119734|CSAG3|389903|CSAG family, member 3##BC119735|CSAG3|389903|CSAG family, member 3##AF080246|CSAG3|389903|CSAG family, member 3##AF136715|CSAG3|389903|CSAG family, member 3##NM_001080848|CSAG2|728461|CSAG family, member 2##NM_001129828|CSAG3|389903|CSAG family, member 3##NM_004909|CSAG2|728461|CSAG family, member 2	0.227912	CTCF.p2:0:0.228
chr17	81176892	81177018	reg1005182.p1	13.747	+	TSC_hg19_v1_chr17_+_81037508 BC082252 NM_001004431 BC118558 BC118638	-139413	+	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	-167286	-	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	-170485	-	None	None	None	None	None	None	None	None	None	BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like##NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1	0.899243	CTCF.p2:2:0.883
chr17	7184008	7184135	reg1004230.p1	13.744	+	TSC_hg19_v1_chr17_-_7166506 AJ011497 NM_001185022	-17547	-	NM_001185023 NM_001307	-17808	-	BC001055 AK313958 TSC_hg19_v1_chr17_-_7165798	-18278	-	TSC_hg19_v1_chr17_+_7185036 AK313372 BC034387 NM_001042 M20747 BC069615 BC069621 BC113592 BC126164 AB527885 CU686940 HQ258267	1044	+	TSC_hg19_v1_chr17_-_7197854 BC033800 BC047760 AK315035	13764	-	TSC_hg19_v1_chr17_-_7197866 AF096834 NM_015982	13808	-	AJ011497|CLDN7|1366|claudin 7##NM_001185022|CLDN7|1366|claudin 7##NM_001185023|CLDN7|1366|claudin 7##NM_001307|CLDN7|1366|claudin 7##BC001055|CLDN7|1366|claudin 7##AK313958|CLDN7|1366|claudin 7##AK313372|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##BC034387|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##NM_001042|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##M20747|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##BC069615|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##BC069621|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##BC113592|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##BC126164|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##HQ258267|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##BC033800|YBX2|51087|Y box binding protein 2##BC047760|YBX2|51087|Y box binding protein 2##AK315035|YBX2|51087|Y box binding protein 2##AF096834|YBX2|51087|Y box binding protein 2##NM_015982|YBX2|51087|Y box binding protein 2	0.995775	CTCF.p2:-25:0.996
chr13	26637120	26637230	reg1003516.p2	13.743	+	BC132898 BC137092 AY358775 NM_001007538	-11995	-	AK302980 TSC_hg19_v1_chr13_+_26042965	-594210	+	TSC_hg19_v1_chr13_+_26042926 AK126031	-594246	+	AL133621 TSC_hg19_v1_chr13_-_26789203	151960	-	TSC_hg19_v1_chr13_-_26795853 AY009109 NM_183044	158682	-	BC034688 TSC_hg19_v1_chr13_-_26795942 AK293272 AJ010347 NM_183043	158802	-	BC132898|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##BC137092|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AY358775|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##NM_001007538|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AK302980|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK126031|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AL133621|RNF6|6049|ring finger protein (C3H2C3 type) 6##AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6##BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6##AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6##AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6	0.388147	CTCF.p2:0:0.388
chr18	77139108	77139237	reg1003783.p1	13.743	+	TSC_hg19_v1_chr18_+_76856487 CU690988	-282673	+	TSC_hg19_v1_chr18_+_76829420 BC053561	-309723	+	BC036473 TSC_hg19_v1_chr18_+_76829395 AK308291 BC022535 BC125219 BC125220 NM_198531 AK093704 AX748269 AK295981	-309773	+	TSC_hg19_v1_chr18_+_77155750 NM_006162 NM_172388 NM_172390 U80917	16641	+	TSC_hg19_v1_chr18_+_77155929 AK292641	16761	+	U80919 TSC_hg19_v1_chr18_+_77155946	16774	+	BC053561|ATP9B|374868|ATPase, class II, type 9B##BC036473|ATP9B|374868|ATPase, class II, type 9B##AK308291|ATP9B|374868|ATPase, class II, type 9B##BC022535|ATP9B|374868|ATPase, class II, type 9B##BC125219|ATP9B|374868|ATPase, class II, type 9B##BC125220|ATP9B|374868|ATPase, class II, type 9B##NM_198531|ATP9B|374868|ATPase, class II, type 9B##AK093704|ATP9B|374868|ATPase, class II, type 9B##AK295981|ATP9B|374868|ATPase, class II, type 9B##NM_006162|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172388|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172390|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80917|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK292641|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80919|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	0.717143	CTCF.p2:-19:0.717
chr5	76164055	76164167	reg1003105.p1	13.743	+	BC022320 NM_130772	-18286	+	TSC_hg19_v1_chr5_+_76114883 BC012453 AY336105 BT009856 CU676194 CU680330 DQ890966 DQ894139	-49167	+	NM_005242 BC018130 TSC_hg19_v1_chr5_+_76114854 U34038	-49259	+	NM_001882 AK223457 AK307729 BC018038 AK311052 X58022 CU676144 CR541666	84708	+	TSC_hg19_v1_chr5_+_76326231 NM_018046 BC032844	162115	+	TSC_hg19_v1_chr5_+_76326341 BC002828 U84971 AY500994 BC073864 CU689558	162423	+	BC022320|S100Z|170591|S100 calcium binding protein Z##NM_130772|S100Z|170591|S100 calcium binding protein Z##BC012453|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##AY336105|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BT009856|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ890966|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ894139|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##NM_005242|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC018130|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##U34038|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##NM_001882|CRHBP|1393|corticotropin releasing hormone binding protein##AK223457|CRHBP|1393|corticotropin releasing hormone binding protein##AK307729|CRHBP|1393|corticotropin releasing hormone binding protein##BC018038|CRHBP|1393|corticotropin releasing hormone binding protein##AK311052|CRHBP|1393|corticotropin releasing hormone binding protein##X58022|CRHBP|1393|corticotropin releasing hormone binding protein##CR541666|CRHBP|1393|corticotropin releasing hormone binding protein##NM_018046|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##BC032844|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##BC002828|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##U84971|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##AY500994|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##BC073864|AGGF1|55109|angiogenic factor with G patch and FHA domains 1	0.371488	CTCF.p2:1:0.371
chr12	23358246	23358372	reg1004786.p1	13.742	+	TSC_hg19_v1_chr12_+_22778130 CU688188 BC006111 AL137750 AK074425	-580162	+	AF207600 TSC_hg19_v1_chr12_+_22778077 BC066907 NM_001039481 NM_018638	-580266	+	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	-660843	-	NM_178010 AK098610 AK223536	379217	-	AK074317 TSC_hg19_v1_chr12_-_24102605 BC065532 AB081589 NM_006940	744293	-	TSC_hg19_v1_chr12_-_24103855 AK299607 AK096569	745545	-	BC006111|ETNK1|55500|ethanolamine kinase 1##AL137750|ETNK1|55500|ethanolamine kinase 1##AK074425|ETNK1|55500|ethanolamine kinase 1##AF207600|ETNK1|55500|ethanolamine kinase 1##BC066907|ETNK1|55500|ethanolamine kinase 1##NM_001039481|ETNK1|55500|ethanolamine kinase 1##NM_018638|ETNK1|55500|ethanolamine kinase 1##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528##NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5##AK098610|SOX5|6660|SRY (sex determining region Y)-box 5##AK223536|SOX5|6660|SRY (sex determining region Y)-box 5##AK074317|SOX5|6660|SRY (sex determining region Y)-box 5##BC065532|SOX5|6660|SRY (sex determining region Y)-box 5##AB081589|SOX5|6660|SRY (sex determining region Y)-box 5##NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5##AK299607|SOX5|6660|SRY (sex determining region Y)-box 5##AK096569|SOX5|6660|SRY (sex determining region Y)-box 5	0.986724	CTCF.p2:7:0.987
chr1	9804	9936	reg1021305.p1	13.742	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	19535	-	NM_001005484	59220	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	357778	+	AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16	0.0	
chr6	46387420	46387547	reg1004886.p1	13.740	+	NM_005822	-93855	-	D83407 TSC_hg19_v1_chr6_-_46293410 BC038509	-94076	-	CU691584 DQ891658 DQ894845 AK312392 TSC_hg19_v1_chr6_-_46293389	-94180	-	TSC_hg19_v1_chr6_-_46459031 AY034086 AK090990 AX746721 NM_001251974	71551	-	AY034085 NM_001251973	72273	-	AK307986 CU679677 DQ892889 EU176719 AF237982 AK301604 BC034323 BC012548 AK292263 BC010358 NM_016593	232892	-	NM_005822|RCAN2|10231|regulator of calcineurin 2##D83407|RCAN2|10231|regulator of calcineurin 2##BC038509|RCAN2|10231|regulator of calcineurin 2##DQ891658|RCAN2|10231|regulator of calcineurin 2##DQ894845|RCAN2|10231|regulator of calcineurin 2##AK312392|RCAN2|10231|regulator of calcineurin 2##AY034086|RCAN2|10231|regulator of calcineurin 2##AK090990|RCAN2|10231|regulator of calcineurin 2##NM_001251974|RCAN2|10231|regulator of calcineurin 2##AY034085|RCAN2|10231|regulator of calcineurin 2##NM_001251973|RCAN2|10231|regulator of calcineurin 2##AK307986|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##DQ892889|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##EU176719|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##AF237982|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##AK301604|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##BC034323|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##BC012548|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##AK292263|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##BC010358|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##NM_016593|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1	0.999311	CTCF.p2:-5:0.999
chr7	130667047	130667178	reg1005458.p1	13.739	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-248185	-	AF294347 AF431815 BC038415 NM_052933	-295757	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-313517	-	TSC_hg19_v1_chr7_-_130792857 BC047367	125747	-	AK294384 NM_001145354	127742	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	345494	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.348715	CTCF.p2:-8:0.349
chr22	39707001	39707141	reg1003487.p2	13.738	+	NM_002608 X02811 TSC_hg19_v1_chr22_-_39640988 M12783	-66064	-	CR541807 CU013138 CU013426 AB590092 TSC_hg19_v1_chr22_-_39639984 CR456538 X02744	-67046	-	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	-70162	-	BC014017 BC013674 BC013861 BC015032 BC015767 BC088373 BC063662 BC071666 CR456566 BC006483 BC012146 BC012786 TSC_hg19_v1_chr22_-_39715629 AK092695 AK297711 AK315693 AX747675 BC008492 BC107711 D28415 NM_000967 NM_001033853	8568	-	TSC_hg19_v1_chr22_+_39745981 NM_004711 NM_145731 BC000731 AK295863 CR456590 AK289507 AB209372 CU013190 CU013478 AB587338 AJ002304 AJ002305 BT007135 CU674372	38834	+	AJ002303 NM_145738	53103	+	NM_002608|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02811|PDGFB|5155|platelet-derived growth factor beta polypeptide##M12783|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR541807|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013138|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013426|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR456538|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02744|PDGFB|5155|platelet-derived growth factor beta polypeptide##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide##BC014017|RPL3|6122|ribosomal protein L3##BC013674|RPL3|6122|ribosomal protein L3##BC013861|RPL3|6122|ribosomal protein L3##BC015032|RPL3|6122|ribosomal protein L3##BC015767|RPL3|6122|ribosomal protein L3##BC088373|RPL3|6122|ribosomal protein L3##BC063662|RPL3|6122|ribosomal protein L3##BC071666|RPL3|6122|ribosomal protein L3##CR456566|RPL3|6122|ribosomal protein L3##BC006483|RPL3|6122|ribosomal protein L3##BC012146|RPL3|6122|ribosomal protein L3##BC012786|RPL3|6122|ribosomal protein L3##AK092695|RPL3|6122|ribosomal protein L3##AK297711|RPL3|6122|ribosomal protein L3##AK315693|RPL3|6122|ribosomal protein L3##BC008492|RPL3|6122|ribosomal protein L3##BC107711|RPL3|6122|ribosomal protein L3##NM_000967|RPL3|6122|ribosomal protein L3##NM_001033853|RPL3|6122|ribosomal protein L3##NM_004711|SYNGR1|9145|synaptogyrin 1##NM_145731|SYNGR1|9145|synaptogyrin 1##BC000731|SYNGR1|9145|synaptogyrin 1##AK295863|SYNGR1|9145|synaptogyrin 1##CR456590|SYNGR1|9145|synaptogyrin 1##AK289507|SYNGR1|9145|synaptogyrin 1##CU013190|SYNGR1|9145|synaptogyrin 1##CU013478|SYNGR1|9145|synaptogyrin 1##AJ002304|SYNGR1|9145|synaptogyrin 1##AJ002305|SYNGR1|9145|synaptogyrin 1##BT007135|SYNGR1|9145|synaptogyrin 1##AJ002303|SYNGR1|9145|synaptogyrin 1##NM_145738|SYNGR1|9145|synaptogyrin 1	0.148768	
chr6	7276274	7276416	reg1005833.p1	13.738	+	BX647723 TSC_hg19_v1_chr6_+_7108910	-167442	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	-168122	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	-168310	+	BT007387 CR456961 AB464204 DQ892751 EU176743 TSC_hg19_v1_chr6_-_7313433 Z12830 AK075562 AK222762 AK222809 AK291550 AK312653 CR936719 BC007710 NM_003144	37101	-	AF414185 NM_001170692 NM_001170693 NM_205864 TSC_hg19_v1_chr6_-_7389974	113622	-	TSC_hg19_v1_chr6_+_7390042 AY094356 AK314467 BC006104 NM_031480 AK054568	113753	+	BX647723|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##BT007387|SSR1|6745|signal sequence receptor, alpha##CR456961|SSR1|6745|signal sequence receptor, alpha##DQ892751|SSR1|6745|signal sequence receptor, alpha##EU176743|SSR1|6745|signal sequence receptor, alpha##Z12830|SSR1|6745|signal sequence receptor, alpha##AK075562|SSR1|6745|signal sequence receptor, alpha##AK222762|SSR1|6745|signal sequence receptor, alpha##AK222809|SSR1|6745|signal sequence receptor, alpha##AK291550|SSR1|6745|signal sequence receptor, alpha##AK312653|SSR1|6745|signal sequence receptor, alpha##CR936719|SSR1|6745|signal sequence receptor, alpha##BC007710|SSR1|6745|signal sequence receptor, alpha##NM_003144|SSR1|6745|signal sequence receptor, alpha##AF414185|CAGE1|285782|cancer antigen 1##NM_001170692|CAGE1|285782|cancer antigen 1##NM_001170693|CAGE1|285782|cancer antigen 1##NM_205864|CAGE1|285782|cancer antigen 1##AY094356|RIOK1|83732|RIO kinase 1 (yeast)##AK314467|RIOK1|83732|RIO kinase 1 (yeast)##BC006104|RIOK1|83732|RIO kinase 1 (yeast)##NM_031480|RIOK1|83732|RIO kinase 1 (yeast)##AK054568|RIOK1|83732|RIO kinase 1 (yeast)	0.752991	CTCF.p2:1:0.753
chr12	51735309	51735421	reg1002778.p2	13.737	+	TSC_hg19_v1_chr12_-_51717961 BC047686 AK314304	-17385	-	TSC_hg19_v1_chr12_-_51717911 AK093638 AB032698 AK000783 AK225911 NM_016293	-17444	-	TSC_hg19_v1_chr12_-_51717901 CU690454 AF146531	-17497	-	AB463599 BC075091 AF120493 BC069454 NM_001971	5077	-	AK295315 AB018282 TSC_hg19_v1_chr12_+_51785241 DQ975204 DQ996398 DQ996537	49825	+	BC035822 NM_007210	49830	-	BC047686|BIN2|51411|bridging integrator 2##AK314304|BIN2|51411|bridging integrator 2##AK093638|BIN2|51411|bridging integrator 2##AB032698|BIN2|51411|bridging integrator 2##AK000783|BIN2|51411|bridging integrator 2##AK225911|BIN2|51411|bridging integrator 2##NM_016293|BIN2|51411|bridging integrator 2##AF146531|BIN2|51411|bridging integrator 2##BC075091|CELA1|1990|chymotrypsin-like elastase family, member 1##AF120493|CELA1|1990|chymotrypsin-like elastase family, member 1##BC069454|CELA1|1990|chymotrypsin-like elastase family, member 1##NM_001971|CELA1|1990|chymotrypsin-like elastase family, member 1##AK295315|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AB018282|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ975204|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ996398|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ996537|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##BC035822|GALNT6|11226|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)##NM_007210|GALNT6|11226|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)	0.226552	CTCF.p2:1:0.227
chr16	48664431	48664544	reg1003643.p1	13.737	+	BC051897 TSC_hg19_v1_chr16_-_48644092 AB014515 BC152472 NM_153029	-20371	-	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	-245235	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	-264696	-	AB527638 TSC_hg19_v1_chr16_-_49315397	650906	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	651013	-	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	651247	-	BC051897|N4BP1|9683|NEDD4 binding protein 1##AB014515|N4BP1|9683|NEDD4 binding protein 1##BC152472|N4BP1|9683|NEDD4 binding protein 1##NM_153029|N4BP1|9683|NEDD4 binding protein 1##BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor	0.999116	CTCF.p2:21:0.999
chr6	155851485	155851611	reg1004354.p1	13.735	+	AF190122 NM_015718	-74512	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-215925	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-215963	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	1247515	+	TSC_hg19_v1_chr6_+_157099206 AB587572	1247677	+	TSC_hg19_v1_chr6_+_157099283 AF521671	1247736	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.858091	CTCF.p2:14:0.858
chr3	100309514	100309637	reg1003767.p1	13.732	+	BC040355 TSC_hg19_v1_chr3_+_100238088	-71500	+	TSC_hg19_v1_chr3_+_100211558 AK129789	-97992	+	TSC_hg19_v1_chr3_+_100211440 AK000996 AY450392 NM_018004	-98122	+	NM_032787 AK027360	18863	+	NM_001007565 NM_001195479 NM_006070 TSC_hg19_v1_chr3_+_100428337 AK093456 BC009241	118670	+	TSC_hg19_v1_chr3_+_100428385 BC001483 NM_001195478	118798	+	BC040355|TMEM45A|55076|transmembrane protein 45A##AK129789|TMEM45A|55076|transmembrane protein 45A##AK000996|TMEM45A|55076|transmembrane protein 45A##AY450392|TMEM45A|55076|transmembrane protein 45A##NM_018004|TMEM45A|55076|transmembrane protein 45A##NM_032787|GPR128|84873|G protein-coupled receptor 128##AK027360|GPR128|84873|G protein-coupled receptor 128##NM_001007565|TFG|10342|TRK-fused gene##NM_001195479|TFG|10342|TRK-fused gene##NM_006070|TFG|10342|TRK-fused gene##AK093456|TFG|10342|TRK-fused gene##BC009241|TFG|10342|TRK-fused gene##BC001483|TFG|10342|TRK-fused gene##NM_001195478|TFG|10342|TRK-fused gene	0.999816	CTCF.p2:12:1.000
chr3	70169663	70169771	reg1003488.p1	13.730	+	TSC_hg19_v1_chr3_+_70048883 BC015590	-120829	+	NM_000248 NM_001184968 NM_198158 NM_198178 Z29678 BC012503 BC065243 BC026961 GU355676	-183906	+	NM_198177 AB006989 AK297858	-254316	+	TSC_hg19_v1_chr3_-_71114076 AK074569 NM_001244813	944479	-	TSC_hg19_v1_chr3_-_71179732 AK027264	1010006	-	AK297649 TSC_hg19_v1_chr3_-_71179738 BX647682	1010023	-	NM_000248|MITF|4286|microphthalmia-associated transcription factor##NM_001184968|MITF|4286|microphthalmia-associated transcription factor##NM_198158|MITF|4286|microphthalmia-associated transcription factor##NM_198178|MITF|4286|microphthalmia-associated transcription factor##Z29678|MITF|4286|microphthalmia-associated transcription factor##BC012503|MITF|4286|microphthalmia-associated transcription factor##BC065243|MITF|4286|microphthalmia-associated transcription factor##BC026961|MITF|4286|microphthalmia-associated transcription factor##GU355676|MITF|4286|microphthalmia-associated transcription factor##NM_198177|MITF|4286|microphthalmia-associated transcription factor##AB006989|MITF|4286|microphthalmia-associated transcription factor##AK297858|MITF|4286|microphthalmia-associated transcription factor##AK074569|FOXP1|27086|forkhead box P1##NM_001244813|FOXP1|27086|forkhead box P1##AK027264|FOXP1|27086|forkhead box P1##AK297649|FOXP1|27086|forkhead box P1##BX647682|FOXP1|27086|forkhead box P1	0.693464	CTCF.p2:0:0.693
chr19	42462042	42462153	reg1003038.p2	13.729	+	NM_199002 TSC_hg19_v1_chr19_+_42388510 BC034013 BC067262	-73611	+	TSC_hg19_v1_chr19_+_42387309 U64105	-74779	+	BC064996 TSC_hg19_v1_chr19_+_42387266 NM_004706 NM_198977 BC011726	-74820	+	AF112996 BT019964 CR457214 CR542116 AB590878 AF112202 AJ133534 BC008950 TSC_hg19_v1_chr19_-_42463499	1371	-	TSC_hg19_v1_chr19_-_42463500 NM_006423	1423	-	AK295833 TSC_hg19_v1_chr19_-_42498254	36140	-	NM_199002|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC034013|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC067262|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##U64105|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC064996|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_004706|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_198977|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC011726|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)##BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)##CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)##CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)##AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)##AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)##BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)##NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)##AK295833|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide	0.255953	CTCF.p2:-2:0.256
chr7	123505675	123505824	reg1005109.p1	13.729	+	AF009010 NM_012269	-20527	+	TSC_hg19_v1_chr7_-_123389069 AM295156 CU690940 AB587496 BC013776 AK289795 D88460 CR749438 BC028602 BC052955 NM_003941	-116775	-	NM_207163 AK299434 AK299389 AK300698 AK309449 BC017911 BC062765 AK309496 AB591033	-209812	+	NM_001174044 NM_003117 NM_153189 AY920278 AY920279 S67798 BC026163	59577	+	AK292229 NM_001174045 NM_001174046 AY920280 AY920281	60171	+	TSC_hg19_v1_chr7_-_123673486 NM_001136002	167755	-	AF009010|HYAL4|23553|hyaluronoglucosaminidase 4##NM_012269|HYAL4|23553|hyaluronoglucosaminidase 4##AM295156|WASL|8976|Wiskott-Aldrich syndrome-like##BC013776|WASL|8976|Wiskott-Aldrich syndrome-like##AK289795|WASL|8976|Wiskott-Aldrich syndrome-like##D88460|WASL|8976|Wiskott-Aldrich syndrome-like##CR749438|WASL|8976|Wiskott-Aldrich syndrome-like##BC028602|WASL|8976|Wiskott-Aldrich syndrome-like##BC052955|WASL|8976|Wiskott-Aldrich syndrome-like##NM_003941|WASL|8976|Wiskott-Aldrich syndrome-like##NM_207163|LMOD2|442721|leiomodin 2 (cardiac)##AK299434|LMOD2|442721|leiomodin 2 (cardiac)##AK299389|LMOD2|442721|leiomodin 2 (cardiac)##AK300698|LMOD2|442721|leiomodin 2 (cardiac)##BC017911|LMOD2|442721|leiomodin 2 (cardiac)##BC062765|LMOD2|442721|leiomodin 2 (cardiac)##NM_001174044|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_003117|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_153189|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920278|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920279|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##S67798|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##BC026163|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AK292229|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174045|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174046|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920280|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920281|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001136002|TMEM229A|730130|transmembrane protein 229A	0.988905	CTCF.p2:17:0.989
chr10	28952922	28953033	reg1003794.p1	13.728	+	TSC_hg19_v1_chr10_+_28878692 BC010356	-74271	+	AB590052 AK297460 TSC_hg19_v1_chr10_+_28822585	-130431	+	AK290174 TSC_hg19_v1_chr10_+_28822429 AK223600 BC004258	-130544	+	TSC_hg19_v1_chr10_+_28966451 NM_012342 AK290639 BC019252 AK223065 U23070	13470	+	NM_032517 BC021730 AY358694	625039	+	TSC_hg19_v1_chr10_+_29698475 BC066966 BC050354	745492	+	BC010356|WAC|51322|WW domain containing adaptor with coiled-coil##AK297460|WAC|51322|WW domain containing adaptor with coiled-coil##AK290174|WAC|51322|WW domain containing adaptor with coiled-coil##AK223600|WAC|51322|WW domain containing adaptor with coiled-coil##BC004258|WAC|51322|WW domain containing adaptor with coiled-coil##NM_012342|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK290639|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC019252|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK223065|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##U23070|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##NM_032517|LYZL1|84569|lysozyme-like 1##BC021730|LYZL1|84569|lysozyme-like 1##AY358694|LYZL1|84569|lysozyme-like 1##BC066966|LOC387647|387647|patched domain containing 3 pseudogene##BC050354|LOC387647|387647|patched domain containing 3 pseudogene	0.955117	CTCF.p2:-14:0.955
chr11	60019069	60019194	reg1004524.p1	13.728	+	AK291870 NM_001247999 NM_152852	-66993	-	AK301387 TSC_hg19_v1_chr11_-_59950526 AB013104 AF350502 AF350503 AF142409 BC022854 BC108728 AK026454 AF212240 AF237908 AF253977 AF261136 AF354930 AK300725 NM_022349 NM_152851	-68481	-	AK304487 AK310142 NM_000139 D10583 BC074800 BC074843 AB590499 JF411082	-162944	+	NM_001243266 NM_024021 NM_148975 AK292089 AK075081 TSC_hg19_v1_chr11_+_60048138 BC020648 CU676600 DQ891395 DQ894573 AB022821 AK314033 AB013102	28962	+	BC101783 AF333758 AF354931 BC069322 NM_139249 GQ129453 GQ129454 AF354933 BC034588 AF354932	83251	+	AK075106 NM_021201 NM_206938 NM_206939 NM_206940 AK297027 TSC_hg19_v1_chr11_+_60146004 BC043485 AF309653 AK309884	126856	+	AK291870|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001247999|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK301387|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AB013104|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF350502|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF350503|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF142409|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC022854|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC108728|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK026454|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF212240|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF237908|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF253977|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF261136|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF354930|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK300725|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_022349|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152851|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK304487|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##AK310142|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##NM_000139|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##D10583|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##BC074800|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##BC074843|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##JF411082|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##NM_001243266|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_024021|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_148975|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK292089|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK075081|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC020648|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ891395|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ894573|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB022821|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK314033|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB013102|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC101783|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF333758|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354931|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC069322|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_139249|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129453|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129454|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354933|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC034588|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354932|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AK075106|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_021201|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206938|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206939|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206940|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK297027|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF309653|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK309884|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7	0.999304	CTCF.p2:22:0.999
chr6	44064586	44064704	reg1004488.p1	13.728	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	-96271	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-325775	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-326111	+	CR627460 TSC_hg19_v1_chr6_+_44094741	30053	+	TSC_hg19_v1_chr6_-_44095161 AK312086	30515	-	TSC_hg19_v1_chr6_-_44095190 NM_032111	30553	-	BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14##NM_032111|MRPL14|64928|mitochondrial ribosomal protein L14	0.998152	CTCF.p2:-11:0.998
chr16	85644219	85644356	reg1005062.p1	13.727	+	BC093665 BC111944 AK126284 NM_198491	-498233	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-582917	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-599158	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	734	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	2666	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	78255	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.854281	CTCF.p2:4:0.854
chr2	182579878	182580022	reg1004381.p1	13.727	+	BC009046 TSC_hg19_v1_chr2_-_182545243 AB593068 AB593070 AB593071 AK313799 AB593069 D82347 HQ426678 JF290420 NM_002500	-34649	-	AJ697855 AJ697856 AY357073 AY690329 AY690330 AY690331 AY690332 AY690333 AJ640141 AJ697858 BC137498 BC137499 AK293844 NM_001030311 NM_001030312 NM_001030313 NM_001160277 NM_201548 TSC_hg19_v1_chr2_-_182521833 HQ426666 HQ426667 HQ426668 HQ426669 HQ426670	-58159	-	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	-257628	+	TSC_hg19_v1_chr2_+_182756494 NM_001130445 NM_006751 AK093143 AX747951 AB067514	176581	+	TSC_hg19_v1_chr2_+_182756689 BC052581 BC064499 BC028706 AK291745 BX647257 AB116937 AB385517 BX647967 AK304238 BX648888	176843	+	NM_001080545 AK129898 AF494535 BX647581 BC017943	270699	+	BC009046|NEUROD1|4760|neurogenic differentiation 1##AB593068|NEUROD1|4760|neurogenic differentiation 1##AB593070|NEUROD1|4760|neurogenic differentiation 1##AB593071|NEUROD1|4760|neurogenic differentiation 1##AK313799|NEUROD1|4760|neurogenic differentiation 1##AB593069|NEUROD1|4760|neurogenic differentiation 1##D82347|NEUROD1|4760|neurogenic differentiation 1##HQ426678|CERKL|375298|ceramide kinase-like##JF290420|CERKL|375298|ceramide kinase-like##NM_002500|NEUROD1|4760|neurogenic differentiation 1##AJ697855|CERKL|375298|ceramide kinase-like##AJ697856|CERKL|375298|ceramide kinase-like##AY357073|CERKL|375298|ceramide kinase-like##AY690329|CERKL|375298|ceramide kinase-like##AY690330|CERKL|375298|ceramide kinase-like##AY690331|CERKL|375298|ceramide kinase-like##AY690332|CERKL|375298|ceramide kinase-like##AY690333|CERKL|375298|ceramide kinase-like##AJ640141|CERKL|375298|ceramide kinase-like##AJ697858|CERKL|375298|ceramide kinase-like##BC137498|CERKL|375298|ceramide kinase-like##BC137499|CERKL|375298|ceramide kinase-like##AK293844|CERKL|375298|ceramide kinase-like##NM_001030311|CERKL|375298|ceramide kinase-like##NM_001030312|CERKL|375298|ceramide kinase-like##NM_001030313|CERKL|375298|ceramide kinase-like##NM_001160277|CERKL|375298|ceramide kinase-like##NM_201548|CERKL|375298|ceramide kinase-like##HQ426667|CERKL|375298|ceramide kinase-like##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##NM_001130445|SSFA2|6744|sperm specific antigen 2##NM_006751|SSFA2|6744|sperm specific antigen 2##AB067514|SSFA2|6744|sperm specific antigen 2##BC052581|SSFA2|6744|sperm specific antigen 2##BC064499|SSFA2|6744|sperm specific antigen 2##BC028706|SSFA2|6744|sperm specific antigen 2##AK291745|SSFA2|6744|sperm specific antigen 2##BX647257|SSFA2|6744|sperm specific antigen 2##AB116937|SSFA2|6744|sperm specific antigen 2##BX647967|SSFA2|6744|sperm specific antigen 2##AK304238|SSFA2|6744|sperm specific antigen 2##BX648888|SSFA2|6744|sperm specific antigen 2##NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	0.982972	CTCF.p2:4:0.983
chr4	86669145	86669288	reg1004702.p1	13.727	+	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	-272873	+	NM_014991	-781673	-	NM_001263 U65887	-1165123	+	TSC_hg19_v1_chr4_+_86699850 NM_001042669	30632	+	BC098580 TSC_hg19_v1_chr4_+_86699865 AK098193	30682	+	AK307423 TSC_hg19_v1_chr4_+_86749064	79838	+	NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24##BC098580|ARHGAP24|83478|Rho GTPase activating protein 24##AK098193|ARHGAP24|83478|Rho GTPase activating protein 24##AK307423|ARHGAP24|83478|Rho GTPase activating protein 24	0.97507	CTCF.p2:11:0.975
chr6	52099134	52099247	reg1003458.p2	13.726	+	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	-47984	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	-146795	-	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-1312655	+	AF384857 JF305974 AB590713 BC070124 NM_052872	10071	-	AB528319 DQ893654 DQ895840 TSC_hg19_v1_chr6_-_52149506 AK312928 AK300754 X62153 AY032603	50301	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	50330	-	NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F##DQ893654|MCM3|4172|minichromosome maintenance complex component 3##DQ895840|MCM3|4172|minichromosome maintenance complex component 3##AK312928|MCM3|4172|minichromosome maintenance complex component 3##AK300754|MCM3|4172|minichromosome maintenance complex component 3##X62153|MCM3|4172|minichromosome maintenance complex component 3##AY032603|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3	0.236227	CTCF.p2:1:0.236
chrX	19244175	19244290	reg1004558.p1	13.726	+	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	-103565	-	TSC_hg19_v1_chrX_-_19002476 NM_000292	-241770	-	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	-535188	+	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	117850	+	NM_001001671	289146	-	TSC_hg19_v1_chrX_-_19689029 AK293237 NM_001184960	444824	-	BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001001671|MAP3K15|389840|mitogen-activated protein kinase kinase kinase 15##AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1	0.015235	
chr10	102902119	102902248	reg1003318.p1	13.725	+	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-11005	+	BC019674 NM_001085398	-11281	-	TSC_hg19_v1_chr10_+_102821745 BC007758 AY359087 AK225949 AK172862	-80524	+	BC136321 BC069156 NM_006562 X90828	86519	-	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	211689	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	445746	-	BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##BC007758|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AY359087|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK225949|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172862|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda	0.912509	CTCF.p2:-2:0.913
chr12	104595114	104595252	reg1005053.p1	13.725	+	TSC_hg19_v1_chr12_-_104531875 X59710 BC007035 AK291934 BC005316 BC005317 AK311706 NM_006166	-63226	-	NM_013320 TSC_hg19_v1_chr12_+_104458317 AK313466 AK223342 BC006558 AF117210 BC033799 EU446491	-136897	+	BC022343 NM_031302 TSC_hg19_v1_chr12_-_104443943	-151254	-	TSC_hg19_v1_chr12_+_104609556 NM_001093771 AK304241 AY057105	14357	+	TSC_hg19_v1_chr12_+_104659047 D28393	63865	+	TSC_hg19_v1_chr12_+_104680799 NM_003330 NM_182729 NM_182742 NM_182743 AK226071 AY344087 AK308881 AY344090 AY344091 AY344076 AY344075 AY344073 AY344074 AY344072 AY344081 AY344082 AY344097 AK293322 AK312262 AK296495 AY344088 AY344089 AY344674 AY344077 AY344092 AY344084 AY344086 AY344673 S79851 X91247 AY344085 AY344080 BC018122 AY344093 AY344669 AY344071 AY344676 AY344070 AY344675	85631	+	X59710|NFYB|4801|nuclear transcription factor Y, beta##BC007035|NFYB|4801|nuclear transcription factor Y, beta##AK291934|NFYB|4801|nuclear transcription factor Y, beta##BC005316|NFYB|4801|nuclear transcription factor Y, beta##BC005317|NFYB|4801|nuclear transcription factor Y, beta##AK311706|NFYB|4801|nuclear transcription factor Y, beta##NM_006166|NFYB|4801|nuclear transcription factor Y, beta##NM_013320|HCFC2|29915|host cell factor C2##AK313466|HCFC2|29915|host cell factor C2##AK223342|HCFC2|29915|host cell factor C2##BC006558|HCFC2|29915|host cell factor C2##AF117210|HCFC2|29915|host cell factor C2##BC033799|HCFC2|29915|host cell factor C2##EU446491|HCFC2|29915|host cell factor C2##BC022343|GLT8D2|83468|glycosyltransferase 8 domain containing 2##NM_031302|GLT8D2|83468|glycosyltransferase 8 domain containing 2##NM_001093771|TXNRD1|7296|thioredoxin reductase 1##AK304241|TXNRD1|7296|thioredoxin reductase 1##AY057105|TXNRD1|7296|thioredoxin reductase 1##D28393|RPL18A|6142|ribosomal protein L18a##NM_003330|TXNRD1|7296|thioredoxin reductase 1##NM_182729|TXNRD1|7296|thioredoxin reductase 1##NM_182742|TXNRD1|7296|thioredoxin reductase 1##NM_182743|TXNRD1|7296|thioredoxin reductase 1##AK226071|TXNRD1|7296|thioredoxin reductase 1##AY344087|TXNRD1|7296|thioredoxin reductase 1##AK308881|TXNRD1|7296|thioredoxin reductase 1##AY344074|TXNRD1|7296|thioredoxin reductase 1##AY344081|TXNRD1|7296|thioredoxin reductase 1##AK293322|TXNRD1|7296|thioredoxin reductase 1##AK312262|TXNRD1|7296|thioredoxin reductase 1##AK296495|TXNRD1|7296|thioredoxin reductase 1##AY344089|TXNRD1|7296|thioredoxin reductase 1##AY344077|TXNRD1|7296|thioredoxin reductase 1##AY344092|TXNRD1|7296|thioredoxin reductase 1##AY344084|TXNRD1|7296|thioredoxin reductase 1##AY344086|TXNRD1|7296|thioredoxin reductase 1##AY344673|TXNRD1|7296|thioredoxin reductase 1##S79851|TXNRD1|7296|thioredoxin reductase 1##X91247|TXNRD1|7296|thioredoxin reductase 1##BC018122|TXNRD1|7296|thioredoxin reductase 1##AY344093|TXNRD1|7296|thioredoxin reductase 1##AY344675|TXNRD1|7296|thioredoxin reductase 1	0.96805	CTCF.p2:-16:0.968
chr16	8622984	8623106	reg1003511.p2	13.725	+	AF094849 AF109106 AF229057 NM_145891 NM_145892 NM_145893	-1240295	+	AK001027 NM_001142334	-1799236	+	TSC_hg19_v1_chr16_+_6533765 BC033885	-2089270	+	TSC_hg19_v1_chr16_+_8715563 NM_024109 AK315383 BC001908 AK022495	92495	+	TSC_hg19_v1_chr16_+_8768473 NM_020686 BX537362 AK096146 BC031413 BC015628	145417	+	NM_000663 TSC_hg19_v1_chr16_+_8806841 BC013965	183790	+	AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_024109|METTL22|79091|methyltransferase like 22##AK315383|METTL22|79091|methyltransferase like 22##BC001908|METTL22|79091|methyltransferase like 22##AK022495|METTL22|79091|methyltransferase like 22##NM_020686|ABAT|18|4-aminobutyrate aminotransferase##BX537362|ABAT|18|4-aminobutyrate aminotransferase##AK096146|ABAT|18|4-aminobutyrate aminotransferase##BC031413|ABAT|18|4-aminobutyrate aminotransferase##BC015628|ABAT|18|4-aminobutyrate aminotransferase##NM_000663|ABAT|18|4-aminobutyrate aminotransferase##BC013965|ABAT|18|4-aminobutyrate aminotransferase	0.040731	
chr17	73110265	73110386	reg1003537.p1	13.725	+	TSC_hg19_v1_chr17_+_73106069 AK300997 AK310697 BC011728 NM_024585	-4271	+	TSC_hg19_v1_chr17_+_73084056 BC009684 NM_004695	-26270	+	TSC_hg19_v1_chr17_+_73043325 D79998	-66992	+	TSC_hg19_v1_chr17_-_73127869 CU692564 BC002516 BC022334 BC008183 BC047763 BC017454 AF154829 AK000419 NM_001252377 NM_014595	17532	-	DQ891909 DQ895094 DQ896835 EU176653 CU674698 AF177862 BC001420 TSC_hg19_v1_chr17_-_73150608 AF266846 AK223321 AK312613	40227	-	AY322169 AY322170 NM_001002032 NM_001002033 NM_016185 AF086910	40448	-	AK300997|ARMC7|79637|armadillo repeat containing 7##BC011728|ARMC7|79637|armadillo repeat containing 7##NM_024585|ARMC7|79637|armadillo repeat containing 7##BC009684|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##NM_004695|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##D79998|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic##AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic##DQ891909|HN1|51155|hematological and neurological expressed 1##DQ895094|HN1|51155|hematological and neurological expressed 1##DQ896835|HN1|51155|hematological and neurological expressed 1##EU176653|HN1|51155|hematological and neurological expressed 1##AF177862|HN1|51155|hematological and neurological expressed 1##BC001420|HN1|51155|hematological and neurological expressed 1##AF266846|HN1|51155|hematological and neurological expressed 1##AK223321|HN1|51155|hematological and neurological expressed 1##AK312613|HN1|51155|hematological and neurological expressed 1##AY322169|HN1|51155|hematological and neurological expressed 1##AY322170|HN1|51155|hematological and neurological expressed 1##NM_001002032|HN1|51155|hematological and neurological expressed 1##NM_001002033|HN1|51155|hematological and neurological expressed 1##NM_016185|HN1|51155|hematological and neurological expressed 1##AF086910|HN1|51155|hematological and neurological expressed 1	0.998228	CTCF.p2:-1:0.998
chr22	24298862	24298986	reg1003589.p2	13.724	+	TSC_hg19_v1_chr22_+_24236595 BC007676 BC008914 M25639 BC053376 BC051440 CR456520 CU013120 CU013408 DQ892195 DQ895390 AB463103 AF469046 BT007148 CR407644 CR541651 Z23063 EF492869 M95775	-62283	+	L10612 TSC_hg19_v1_chr22_+_24236591	-62335	+	BC007376 TSC_hg19_v1_chr22_+_24236579 BC000447	-62344	+	CR456929 L38503 CU013079 CU013097 CU013367 CU013385 DQ890742 AB528145 CR456500 BC071700 CR456374 BC146929 BC146936 NM_001080843 BC002415 AK312043 NM_000854 BC146940 BC146943	4463	-	NM_001084393 AK296110 AK296189 AK298326	10130	+	BT006970 CU012991 CU013279 DQ891571 DQ894765 U84143 AK298326 AK292044 CR456431 BC005971 AK296189 AK304122 AK315943 BC015508 NM_001084392	17716	-	BC007676|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC008914|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##M25639|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC053376|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC051440|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CR456520|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CU013120|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CU013408|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##DQ892195|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##DQ895390|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##AF469046|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BT007148|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CR407644|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CR541651|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##Z23063|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##M95775|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##L10612|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC007376|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC000447|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CR456929|GSTT2|2953|glutathione S-transferase theta 2##L38503|GSTT2|2953|glutathione S-transferase theta 2##CU013079|GSTT2|2953|glutathione S-transferase theta 2##CU013097|GSTT2|2953|glutathione S-transferase theta 2##CU013367|GSTT2|2953|glutathione S-transferase theta 2##CU013385|GSTT2|2953|glutathione S-transferase theta 2##DQ890742|GSTT2|2953|glutathione S-transferase theta 2##CR456500|GSTT2|2953|glutathione S-transferase theta 2##BC071700|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##CR456374|GSTT2|2953|glutathione S-transferase theta 2##BC146929|GSTT2|2953|glutathione S-transferase theta 2##BC146936|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##NM_001080843|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##BC002415|GSTT2|2953|glutathione S-transferase theta 2##AK312043|GSTT2|2953|glutathione S-transferase theta 2##NM_000854|GSTT2|2953|glutathione S-transferase theta 2##BC146940|GSTT2|2953|glutathione S-transferase theta 2##BC146943|GSTT2|2953|glutathione S-transferase theta 2##NM_001084393|DDTL|100037417|D-dopachrome tautomerase-like##AK296110|DDTL|100037417|D-dopachrome tautomerase-like##BT006970|DDT|1652|D-dopachrome tautomerase##CU012991|DDT|1652|D-dopachrome tautomerase##CU013279|DDT|1652|D-dopachrome tautomerase##DQ891571|DDT|1652|D-dopachrome tautomerase##DQ894765|DDT|1652|D-dopachrome tautomerase##U84143|DDT|1652|D-dopachrome tautomerase##AK292044|DDT|1652|D-dopachrome tautomerase##CR456431|DDT|1652|D-dopachrome tautomerase##BC005971|DDT|1652|D-dopachrome tautomerase##BC015508|DDT|1652|D-dopachrome tautomerase##NM_001084392|DDT|1652|D-dopachrome tautomerase	0.368716	CTCF.p2:11:0.369
chr3	9029754	9029864	reg1004293.p1	13.724	+	AB528316 DQ891197 DQ894380 TSC_hg19_v1_chr3_-_9005128 AY004333 BC001302 AK222771 AF169796 AK023075 NM_020165	-24679	-	TSC_hg19_v1_chr3_-_8811300 NM_000916	-218525	-	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	-218723	-	AB007871 AB384477 AK094355 AF427144 TSC_hg19_v1_chr3_-_9290871 AF464189	260935	-	TSC_hg19_v1_chr3_-_9291320 NM_001033117 NM_014850 BC140004 AK054831	261509	-	TSC_hg19_v1_chr3_+_9404750 NM_001114092 NM_015453 AK023263 BC001622 AK001680 BC010421	374966	+	DQ891197|RAD18|56852|RAD18 homolog (S. cerevisiae)##DQ894380|RAD18|56852|RAD18 homolog (S. cerevisiae)##AY004333|RAD18|56852|RAD18 homolog (S. cerevisiae)##BC001302|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK222771|RAD18|56852|RAD18 homolog (S. cerevisiae)##AF169796|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK023075|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_020165|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_000916|OXTR|5021|oxytocin receptor##X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor##AB007871|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK094355|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF427144|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF464189|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_001114092|THUMPD3|25917|THUMP domain containing 3##NM_015453|THUMPD3|25917|THUMP domain containing 3##AK023263|THUMPD3|25917|THUMP domain containing 3##BC001622|THUMPD3|25917|THUMP domain containing 3##AK001680|THUMPD3|25917|THUMP domain containing 3##BC010421|THUMPD3|25917|THUMP domain containing 3	0.026999	
chr7	112190650	112190772	reg1004689.p1	13.724	+	NM_001134468 BC031976 AK096894 NM_182597	-69725	+	NM_001197079	-98599	+	TSC_hg19_v1_chr7_+_112090514 NM_001550 AK225222 BC001272 Y10313 AK297509 AB527574 BT019889 BT019890 CU674634	-100108	+	AK293311 TSC_hg19_v1_chr7_-_112430447 AK314460 AL136626 AK025482 NM_022484	239732	-	AL834437 AK299901 TSC_hg19_v1_chr7_-_112579931 BC114615 AK056380 NM_152556	389119	-	AK297464 AK312587 NM_001146266 AL161959 NM_001146267 TSC_hg19_v1_chr7_-_112726667	535784	-	NM_001134468|C7orf53|286006|chromosome 7 open reading frame 53##BC031976|C7orf53|286006|chromosome 7 open reading frame 53##AK096894|C7orf53|286006|chromosome 7 open reading frame 53##NM_182597|C7orf53|286006|chromosome 7 open reading frame 53##NM_001197079|IFRD1|3475|interferon-related developmental regulator 1##NM_001550|IFRD1|3475|interferon-related developmental regulator 1##AK225222|IFRD1|3475|interferon-related developmental regulator 1##BC001272|IFRD1|3475|interferon-related developmental regulator 1##AK297509|IFRD1|3475|interferon-related developmental regulator 1##BT019889|IFRD1|3475|interferon-related developmental regulator 1##BT019890|IFRD1|3475|interferon-related developmental regulator 1##AK293311|TMEM168|64418|transmembrane protein 168##AK314460|TMEM168|64418|transmembrane protein 168##AL136626|TMEM168|64418|transmembrane protein 168##AK025482|TMEM168|64418|transmembrane protein 168##NM_022484|TMEM168|64418|transmembrane protein 168##AL834437|C7orf60|154743|chromosome 7 open reading frame 60##AK299901|C7orf60|154743|chromosome 7 open reading frame 60##BC114615|C7orf60|154743|chromosome 7 open reading frame 60##AK056380|C7orf60|154743|chromosome 7 open reading frame 60##NM_152556|C7orf60|154743|chromosome 7 open reading frame 60##AK297464|GPR85|54329|G protein-coupled receptor 85##AK312587|GPR85|54329|G protein-coupled receptor 85##NM_001146266|GPR85|54329|G protein-coupled receptor 85##AL161959|GPR85|54329|G protein-coupled receptor 85##NM_001146267|GPR85|54329|G protein-coupled receptor 85	0.996083	CTCF.p2:-15:0.996
chr13	95844139	95844244	reg1003095.p1	13.722	+	X65666 X71136 AB464716 NM_007084	-479873	-	TSC_hg19_v1_chr13_+_95254110 NM_180989 BC033906 BC052243 AK126794	-590089	+	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	-595695	-	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	109521	-	NM_001160100 NM_182848 AK055855	241663	+	TSC_hg19_v1_chr13_+_96204946 NM_006984 BC010920 U89916 AK315737 DQ892831 DQ896077 CR456845	360783	+	X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##NM_180989|GPR180|160897|G protein-coupled receptor 180##BC033906|GPR180|160897|G protein-coupled receptor 180##BC052243|GPR180|160897|G protein-coupled receptor 180##AK126794|GPR180|160897|G protein-coupled receptor 180##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10##NM_006984|CLDN10|9071|claudin 10##BC010920|CLDN10|9071|claudin 10##U89916|CLDN10|9071|claudin 10##AK315737|CLDN10|9071|claudin 10##DQ892831|CLDN10|9071|claudin 10##DQ896077|CLDN10|9071|claudin 10##CR456845|CLDN10|9071|claudin 10	0.998979	CTCF.p2:-1:0.999
chr3	120514019	120514132	reg1004042.p1	13.721	+	NM_005513 TSC_hg19_v1_chr3_+_120461590 AK223401 BC005917 S67859	-52493	+	BC020832 TSC_hg19_v1_chr3_-_120461364 AK293085 BX647664 BX647559 BX647593 NM_173825	-52698	-	TSC_hg19_v1_chr3_-_120461353 AB464115	-52724	-	TSC_hg19_v1_chr3_+_120627071 NM_014980 AK296544 BC022029 AB023223	112990	+	AB209867 TSC_hg19_v1_chr3_-_121264836 CR936627 AY338826 NM_199420	750743	-	NM_001012659	772702	+	NM_005513|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa##AK223401|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa##BC005917|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa##S67859|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa##BC020832|RABL3|285282|RAB, member of RAS oncogene family-like 3##AK293085|RABL3|285282|RAB, member of RAS oncogene family-like 3##BX647664|RABL3|285282|RAB, member of RAS oncogene family-like 3##BX647559|RABL3|285282|RAB, member of RAS oncogene family-like 3##BX647593|RABL3|285282|RAB, member of RAS oncogene family-like 3##NM_173825|RABL3|285282|RAB, member of RAS oncogene family-like 3##NM_014980|STXBP5L|9515|syntaxin binding protein 5-like##AK296544|STXBP5L|9515|syntaxin binding protein 5-like##BC022029|STXBP5L|9515|syntaxin binding protein 5-like##AB023223|STXBP5L|9515|syntaxin binding protein 5-like##AB209867|POLQ|10721|polymerase (DNA directed), theta##CR936627|POLQ|10721|polymerase (DNA directed), theta##AY338826|POLQ|10721|polymerase (DNA directed), theta##NM_199420|POLQ|10721|polymerase (DNA directed), theta##NM_001012659|ARGFX|503582|arginine-fifty homeobox	0.986266	CTCF.p2:11:0.986
chr3	44155779	44155897	reg1004927.p1	13.721	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-423417	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-492325	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-492400	-	AK093476 AX748152 NM_001145030	127539	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	223792	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	224109	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.287079	CTCF.p2:0:0.287
chr8	25946278	25946433	reg1001412.p1	13.721	+	BC137106 BC137107 NM_022659 TSC_hg19_v1_chr8_-_25902675 AK001144	-43689	-	TSC_hg19_v1_chr8_+_25316748 AK299278 AL833627 BC015691 BC104450 BC104451	-629521	+	AK292505 TSC_hg19_v1_chr8_+_25316724	-629633	+	TSC_hg19_v1_chr8_+_26149035 NM_002717	202666	+	AK314823 TSC_hg19_v1_chr8_+_26149043 BC041071	202694	+	TSC_hg19_v1_chr8_+_26149092 M64929 AY189686	202839	+	BC137106|EBF2|64641|early B-cell factor 2##BC137107|EBF2|64641|early B-cell factor 2##NM_022659|EBF2|64641|early B-cell factor 2##AK001144|EBF2|64641|early B-cell factor 2##AK299278|CDCA2|157313|cell division cycle associated 2##AL833627|CDCA2|157313|cell division cycle associated 2##BC015691|CDCA2|157313|cell division cycle associated 2##BC104450|CDCA2|157313|cell division cycle associated 2##BC104451|CDCA2|157313|cell division cycle associated 2##AK292505|CDCA2|157313|cell division cycle associated 2##NM_002717|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AK314823|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##BC041071|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##M64929|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AY189686|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha	0.999757	CTCF.p2:-9:1.000
chr14	76853627	76853741	reg1004164.p1	13.720	+	NM_004452	-15995	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-235378	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-235407	+	TSC_hg19_v1_chr14_+_77227817 AK094330	374116	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	374771	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	375368	+	NM_004452|ESRRB|2103|estrogen-related receptor beta##AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1	0.67375	CTCF.p2:10:0.674
chr7	81585970	81586089	reg1003294.p2	13.719	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-186655	-	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-1037355	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-1037595	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	486817	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	487051	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	1205840	-	FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)	0.742507	CTCF.p2:17:0.743
chr8	10682950	10683094	reg1005294.p1	13.719	+	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	-95038	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	-152863	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	-170382	-	AY238941 AY523566 BC093762 BC143382 NM_017884 TSC_hg19_v1_chr8_-_10697379 AY029161 AK313715 BC015479 AK296724	14312	-	TSC_hg19_v1_chr8_-_10697386 AF205718 AF418553 AJ344104	14387	-	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	375843	-	AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##AY238941|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY523566|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC093762|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC143382|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##NM_017884|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AK313715|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC015479|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF205718|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF418553|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ344104|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6	0.993872	CTCF.p2:2:0.994
chr11	130301314	130301427	reg1002096.p1	13.717	+	TSC_hg19_v1_chr11_-_130298505 NM_007037	-2850	-	BC113874 TSC_hg19_v1_chr11_-_130298419 BC089435	-3008	-	TSC_hg19_v1_chr11_-_130184509 AK314701 BC030580 BC049375 BC071729 NM_014155	-116838	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	17292	+	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	484975	-	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	485018	-	NM_007037|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC113874|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC089435|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##AK314701|ZBTB44|29068|zinc finger and BTB domain containing 44##BC030580|ZBTB44|29068|zinc finger and BTB domain containing 44##BC049375|ZBTB44|29068|zinc finger and BTB domain containing 44##BC071729|ZBTB44|29068|zinc finger and BTB domain containing 44##NM_014155|ZBTB44|29068|zinc finger and BTB domain containing 44##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19	0.477788	CTCF.p2:-31:0.478
chr18	56197115	56197254	reg1003409.p1	13.717	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-308334	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-308381	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-308422	+	BX647796 NM_052947	99004	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	141457	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	141544	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.107738	
chr11	75863324	75863444	reg1003838.p1	13.716	+	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	-337106	+	NM_003369 TSC_hg19_v1_chr11_+_75526233 AK291011	-337162	+	TSC_hg19_v1_chr11_+_75479822 AB048286 AY780646 AY358532 AL834287 AF384161 CU677247 AY780647	-383461	+	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	54128	-	TSC_hg19_v1_chr11_-_75921806 AK075540	58420	-	TSC_hg19_v1_chr11_-_76091995 AB590785 AF007393 AF081567 HQ258648 NM_004705 AK291843 BC117138 BC117140 BC110304	228624	-	BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##NM_003369|UVRAG|7405|UV radiation resistance associated gene##AK291011|UVRAG|7405|UV radiation resistance associated gene##AB048286|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY358532|DGAT2|84649|diacylglycerol O-acyltransferase 2##AL834287|DGAT2|84649|diacylglycerol O-acyltransferase 2##AF384161|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY780647|DGAT2|84649|diacylglycerol O-acyltransferase 2##BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11##AK075540|WNT11|7481|wingless-type MMTV integration site family, member 11##AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	0.148859	
chr9	114875387	114875517	reg1004263.p1	13.716	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-215985	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-216338	+	AL833535 NM_173521	-329677	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	62068	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	219835	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	220397	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.095376	
chr6	24767035	24767163	reg1005107.p1	13.714	+	AK022681 AB075502 AL136632 NM_030939	-47755	-	NM_001160094 NM_018473 TSC_hg19_v1_chr6_+_24667281 AF155649 AF220186 AK000508 AF274952 AK309738 BC000894	-99763	+	TSC_hg19_v1_chr6_-_24667128 AK298699	-99877	-	TSC_hg19_v1_chr6_+_24775164 AK021685 NM_001251989 NM_001251990 NM_015895 AK315743 BC005389 BC005185	8095	+	NM_001251991	8541	+	U49187 AK300138 BC001232 NM_015864	110418	-	AK022681|C6orf62|81688|chromosome 6 open reading frame 62##AB075502|C6orf62|81688|chromosome 6 open reading frame 62##AL136632|C6orf62|81688|chromosome 6 open reading frame 62##NM_030939|C6orf62|81688|chromosome 6 open reading frame 62##NM_001160094|ACOT13|55856|acyl-CoA thioesterase 13##NM_018473|ACOT13|55856|acyl-CoA thioesterase 13##AF155649|ACOT13|55856|acyl-CoA thioesterase 13##AF220186|ACOT13|55856|acyl-CoA thioesterase 13##AK000508|ACOT13|55856|acyl-CoA thioesterase 13##AF274952|ACOT13|55856|acyl-CoA thioesterase 13##AK309738|ACOT13|55856|acyl-CoA thioesterase 13##BC000894|ACOT13|55856|acyl-CoA thioesterase 13##AK298699|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK021685|GMNN|51053|geminin, DNA replication inhibitor##NM_001251989|GMNN|51053|geminin, DNA replication inhibitor##NM_001251990|GMNN|51053|geminin, DNA replication inhibitor##NM_015895|GMNN|51053|geminin, DNA replication inhibitor##AK315743|GMNN|51053|geminin, DNA replication inhibitor##BC005389|GMNN|51053|geminin, DNA replication inhibitor##BC005185|GMNN|51053|geminin, DNA replication inhibitor##NM_001251991|GMNN|51053|geminin, DNA replication inhibitor##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B	0.979061	CTCF.p2:18:0.979
chr1	114447822	114447937	reg1004256.p1	13.713	+	TSC_hg19_v1_chr1_-_114447651 AK314641 AF092094 NM_006594	-188	-	AB385090 CU680806 BC014146 AK093740 AX748284 AB209817 TSC_hg19_v1_chr1_-_114447534 AK298037 AK300204	-418	-	NM_001010922 TSC_hg19_v1_chr1_-_114430204 AK289439	-17693	-	TSC_hg19_v1_chr1_+_114447947 NM_022836 AF306693 CR936679 AK024060	75	+	TSC_hg19_v1_chr1_+_114448038 AF306691 BC029687	165	+	BC033012 NM_152696 NM_198268 AK122662	24117	+	AK314641|AP4B1|10717|adaptor-related protein complex 4, beta 1 subunit##AF092094|AP4B1|10717|adaptor-related protein complex 4, beta 1 subunit##NM_006594|AP4B1|10717|adaptor-related protein complex 4, beta 1 subunit##BC014146|AP4B1|10717|adaptor-related protein complex 4, beta 1 subunit##AK093740|AP4B1|10717|adaptor-related protein complex 4, beta 1 subunit##AB209817|AP4B1|10717|adaptor-related protein complex 4, beta 1 subunit##AK298037|AP4B1|10717|adaptor-related protein complex 4, beta 1 subunit##AK300204|AP4B1|10717|adaptor-related protein complex 4, beta 1 subunit##NM_001010922|BCL2L15|440603|BCL2-like 15##AK289439|BCL2L15|440603|BCL2-like 15##NM_022836|DCLRE1B|64858|DNA cross-link repair 1B##AF306693|DCLRE1B|64858|DNA cross-link repair 1B##CR936679|DCLRE1B|64858|DNA cross-link repair 1B##AK024060|DCLRE1B|64858|DNA cross-link repair 1B##AF306691|DCLRE1B|64858|DNA cross-link repair 1B##BC029687|DCLRE1B|64858|DNA cross-link repair 1B##BC033012|HIPK1|204851|homeodomain interacting protein kinase 1##NM_152696|HIPK1|204851|homeodomain interacting protein kinase 1##NM_198268|HIPK1|204851|homeodomain interacting protein kinase 1##AK122662|HIPK1|204851|homeodomain interacting protein kinase 1	0.955584	CTCF.p2:4:0.956
chr2	87035598	87035724	reg1003788.p1	13.713	+	AK124156 NM_001145873	-143	-	AK300089 NM_001768 NM_171827	-16842	-	TSC_hg19_v1_chr2_-_87018118 AY039664	-17540	-	X13452 AK303360 M36712 Y00805 BC100911 BC100912 BC100913 BC100914 X13444 X13445 X13446 NM_001178100 NM_004931 NM_172101 NM_172102 NM_172213	53358	-	TSC_hg19_v1_chr2_+_87140905 AK302429 NM_001078170	105258	+	CR749330 NM_001024457	109076	+	AK124156|CD8A|925|CD8a molecule##NM_001145873|CD8A|925|CD8a molecule##AK300089|CD8A|925|CD8a molecule##NM_001768|CD8A|925|CD8a molecule##NM_171827|CD8A|925|CD8a molecule##AY039664|CD8A|925|CD8a molecule##X13452|CD8B|926|CD8b molecule##AK303360|CD8B|926|CD8b molecule##M36712|CD8B|926|CD8b molecule##Y00805|CD8B|926|CD8b molecule##BC100911|CD8B|926|CD8b molecule##BC100912|CD8B|926|CD8b molecule##BC100913|CD8B|926|CD8b molecule##BC100914|CD8B|926|CD8b molecule##X13444|CD8B|926|CD8b molecule##X13445|CD8B|926|CD8b molecule##X13446|CD8B|926|CD8b molecule##NM_001178100|CD8B|926|CD8b molecule##NM_004931|CD8B|926|CD8b molecule##NM_172101|CD8B|926|CD8b molecule##NM_172102|CD8B|926|CD8b molecule##NM_172213|CD8B|926|CD8b molecule##AK302429|RGPD2|729857|RANBP2-like and GRIP domain containing 2##NM_001078170|RGPD2|729857|RANBP2-like and GRIP domain containing 2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1	0.995556	CTCF.p2:-4:0.996
chr4	152283977	152284102	reg1004664.p1	13.713	+	BC121109 BC121110 NM_183375	-85715	+	TSC_hg19_v1_chr4_-_152149045 AK294476 NM_001243349	-134928	-	BC032404 BX647422 NM_001009555 NM_001128923	-136450	-	TSC_hg19_v1_chr4_+_152330327 NM_001109977	46322	+	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	398102	-	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	989857	-	BC121109|PRSS48|345062|protease, serine, 48##BC121110|PRSS48|345062|protease, serine, 48##NM_183375|PRSS48|345062|protease, serine, 48##AK294476|SH3D19|152503|SH3 domain containing 19##NM_001243349|SH3D19|152503|SH3 domain containing 19##BC032404|SH3D19|152503|SH3 domain containing 19##BX647422|SH3D19|152503|SH3 domain containing 19##NM_001009555|SH3D19|152503|SH3 domain containing 19##NM_001128923|SH3D19|152503|SH3 domain containing 19##NM_001109977|FAM160A1|729830|family with sequence similarity 160, member A1##AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7	0.0649	
chr16	22332694	22332820	reg1003681.p1	13.712	+	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	-24009	+	TSC_hg19_v1_chr16_+_22217630 NM_013302 AK308757 BC032665	-115084	+	AK098260 AK128606 AK307544 NM_173615	-228896	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	53038	-	NM_001135865 BC036263 AK296338 CU690320	192225	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	492745	+	AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase##BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK098260|VWA3A|146177|von Willebrand factor A domain containing 3A##AK128606|VWA3A|146177|von Willebrand factor A domain containing 3A##AK307544|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_173615|VWA3A|146177|von Willebrand factor A domain containing 3A##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001135865|LOC100132247|100132247|nuclear pore complex interacting protein related gene##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296338|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2	0.999606	CTCF.p2:-30:0.977
chr2	204349107	204349240	reg1005256.p1	13.711	+	TSC_hg19_v1_chr2_+_204193004 NM_005759 AK311427 AK302853 AK294429 AK299824 AK316000 BC001439 AB590360 AF260261 BT009920 CU674706 DQ890735 DQ893907	-156038	+	TSC_hg19_v1_chr2_+_204103740 AF183412 AK297082 BC093022 BC033752 BC020616 AL832998 AY359068 AK307931 DQ890918 DQ894068 DQ894069 CU676580	-245452	+	NM_177538	-246010	+	TSC_hg19_v1_chr2_-_204399987 BC032486 AK096270 AB053311 AJ584699 AY494951 AY523977 AY523978 NM_203365 NM_213589	50973	-	NM_001243077 NM_001243078 NM_006139 AJ517504 AK313313 J02988 TSC_hg19_v1_chr2_+_204571361 AK303421	222107	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	222226	+	NM_005759|ABI2|10152|abl-interactor 2##AK302853|ABI2|10152|abl-interactor 2##AK294429|ABI2|10152|abl-interactor 2##AK299824|ABI2|10152|abl-interactor 2##AK316000|ABI2|10152|abl-interactor 2##BC001439|ABI2|10152|abl-interactor 2##AF260261|ABI2|10152|abl-interactor 2##BT009920|ABI2|10152|abl-interactor 2##DQ890735|ABI2|10152|abl-interactor 2##DQ893907|ABI2|10152|abl-interactor 2##AF183412|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK297082|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC093022|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC033752|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC020616|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AL832998|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AY359068|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK307931|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ890918|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ894068|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ894069|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##NM_177538|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK096270|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AB053311|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AJ584699|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY494951|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523977|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523978|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_203365|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_213589|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_001243077|CD28|940|CD28 molecule##NM_001243078|CD28|940|CD28 molecule##NM_006139|CD28|940|CD28 molecule##AJ517504|CD28|940|CD28 molecule##AK313313|CD28|940|CD28 molecule##J02988|CD28|940|CD28 molecule##AK303421|CD28|940|CD28 molecule##BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule	0.740427	CTCF.p2:-11:0.740
chr14	75762922	75763040	reg1003018.p2	13.710	+	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	-17399	+	TSC_hg19_v1_chr14_-_75643341 NM_006827	-119629	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	-119648	-	NM_001135047 TSC_hg19_v1_chr14_+_75894724	131660	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	132032	+	BC051303 NM_001135049	135855	+	NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##NM_006827|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2	0.752863	CTCF.p2:-4:0.735
chr15	42065071	42065193	reg1003909.p1	13.710	+	AB011090 TSC_hg19_v1_chr15_+_42052630	-12529	+	TSC_hg19_v1_chr15_+_41952661 AK055203	-112480	+	TSC_hg19_v1_chr15_+_41952628 NM_001080541 NM_001164273	-112527	+	BC036660 NM_001128608 NM_014994 TSC_hg19_v1_chr15_+_42066666 BX648786	1526	+	AK302482 TSC_hg19_v1_chr15_+_42066879 AL833267 AB011168 BC113983 BC114493 AK091616 AK292414	1706	+	TSC_hg19_v1_chr15_+_42120310 AK289833 NM_001114632 NM_001198588 NM_005090 AB209150 AK000814 BC139899 AK000663 AK225503 AK000550 BC067834 AF065215 AK290051 DQ523799 DQ523800 AF121908 BC110415 BC025290 CU692962	55126	+	AB011090|MGA|23269|MAX gene associated##AK055203|MGA|23269|MAX gene associated##NM_001080541|MGA|23269|MAX gene associated##NM_001164273|MGA|23269|MAX gene associated##BC036660|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##NM_001128608|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##NM_014994|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BX648786|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK302482|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AL833267|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AB011168|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BC113983|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BC114493|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK091616|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK292414|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK289833|JMJD7|100137047|jumonji domain containing 7##NM_001114632|JMJD7|100137047|jumonji domain containing 7##NM_001198588|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##NM_005090|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AB209150|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AK000814|JMJD7|100137047|jumonji domain containing 7##BC139899|JMJD7|100137047|jumonji domain containing 7##AK000663|JMJD7|100137047|jumonji domain containing 7##AK225503|JMJD7|100137047|jumonji domain containing 7##AK000550|JMJD7|100137047|jumonji domain containing 7##BC067834|JMJD7|100137047|jumonji domain containing 7##AF065215|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AK290051|JMJD7|100137047|jumonji domain containing 7##DQ523799|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##DQ523800|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AF121908|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##BC110415|JMJD7|100137047|jumonji domain containing 7##BC025290|JMJD7|100137047|jumonji domain containing 7	0.989644	CTCF.p2:-13:0.990
chr2	228749246	228749375	reg1005520.p1	13.710	+	AK097409 NM_178821 BC036377 AK098821 AK301861	-12958	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	-70719	+	AF271633 BC032014 AK301490 AF283317 AK312464 NM_025243	-166589	-	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	297052	-	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	1386695	-	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	1829938	-	AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AF271633|SLC19A3|80704|solute carrier family 19, member 3##BC032014|SLC19A3|80704|solute carrier family 19, member 3##AK301490|SLC19A3|80704|solute carrier family 19, member 3##AF283317|SLC19A3|80704|solute carrier family 19, member 3##AK312464|SLC19A3|80704|solute carrier family 19, member 3##NM_025243|SLC19A3|80704|solute carrier family 19, member 3##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing	0.990251	CTCF.p2:8:0.990
chr22	41042347	41042479	reg1003476.p2	13.710	+	TSC_hg19_v1_chr22_-_41032716 BC115039 NM_020831 AF448806 AB037859 BC064620 AJ297258	-9709	-	TSC_hg19_v1_chr22_-_41032681 AF368061	-9760	-	TSC_hg19_v1_chr22_-_40859427 AJ297257	-182983	-	AK314857 AF490537 NM_005297 BC001736 BC021146 AY745811 AY747629 CR456497 AB063174 CU013094 CU013382 AB463112 AY562945 BT006725 DQ893603 DQ895065	32808	+	AB528234 CU013178 CU013466 CU675207 DQ893138 DQ896422 AK298215 AK300553 CR456577 BC012998 BX647991 AK292924 BC005957 BC024741 TSC_hg19_v1_chr22_-_41215380 BC039064 Y12860 NM_006358	172914	-	CU013186 CU013474 BC107120 BC101206 BC101207 BC101208 BC107148 BC139724 AK316155 AY513286 BC071629 BC121107 BC121108 U17714 U28918 AY826824 AY826825 TSC_hg19_v1_chr22_-_41252629 AK312399 BC052982	210176	-	BC115039|MKL1|57591|megakaryoblastic leukemia (translocation) 1##NM_020831|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF448806|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AB037859|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC064620|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AJ297258|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF368061|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AJ297257|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AK314857|MCHR1|2847|melanin-concentrating hormone receptor 1##AF490537|MCHR1|2847|melanin-concentrating hormone receptor 1##NM_005297|MCHR1|2847|melanin-concentrating hormone receptor 1##BC001736|MCHR1|2847|melanin-concentrating hormone receptor 1##BC021146|MCHR1|2847|melanin-concentrating hormone receptor 1##AY745811|MCHR1|2847|melanin-concentrating hormone receptor 1##AY747629|MCHR1|2847|melanin-concentrating hormone receptor 1##CR456497|MCHR1|2847|melanin-concentrating hormone receptor 1##AB063174|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013094|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013382|MCHR1|2847|melanin-concentrating hormone receptor 1##AY562945|MCHR1|2847|melanin-concentrating hormone receptor 1##BT006725|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ893603|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ895065|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013178|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##CU013466|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##DQ893138|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##DQ896422|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##AK298215|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##AK300553|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##CR456577|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BC012998|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BX647991|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##AK292924|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BC005957|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BC024741|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BC039064|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##Y12860|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##NM_006358|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##CU013186|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##CU013474|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC101206|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC101207|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC101208|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC107148|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC139724|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AK316155|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AY513286|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC071629|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC121107|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC121108|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##U17714|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##U28918|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AY826824|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AY826825|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AK312399|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC052982|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)	1.448135	CTCF.p2:7:0.995	CTCF.p2:42:0.398
chr8	143864035	143864155	reg1004901.p1	13.710	+	NM_023946 NM_177457	-4457	-	TSC_hg19_v1_chr8_-_143859244 AF321824 BC032306	-4848	-	NM_177476 BC014560 TSC_hg19_v1_chr8_-_143858644 NM_177477	-5506	-	CU689150 BC022806 X82693 AK298639 AK312164 BC031330 NM_003695	3874	-	D84290 NM_002066 BC126336 BC126338	52126	+	X55764 AF478474 BC096285 BC096286 BC096287 NM_000497 NM_001026213	97138	-	NM_023946|LYNX1|66004|Ly6/neurotoxin 1##NM_177457|LYNX1|66004|Ly6/neurotoxin 1##AF321824|LYNX1|66004|Ly6/neurotoxin 1##NM_177476|LYNX1|66004|Ly6/neurotoxin 1##BC014560|LYNX1|66004|Ly6/neurotoxin 1##NM_177477|LYNX1|66004|Ly6/neurotoxin 1##BC022806|LY6D|8581|lymphocyte antigen 6 complex, locus D##X82693|LY6D|8581|lymphocyte antigen 6 complex, locus D##AK312164|LY6D|8581|lymphocyte antigen 6 complex, locus D##BC031330|LY6D|8581|lymphocyte antigen 6 complex, locus D##NM_003695|LY6D|8581|lymphocyte antigen 6 complex, locus D##D84290|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##NM_002066|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126336|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126338|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##X55764|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##AF478474|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096285|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096286|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096287|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_000497|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_001026213|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1	0.999921	CTCF.p2:-8:1.000
chr8	23267990	23268110	reg1003320.p2	13.710	+	TSC_hg19_v1_chr8_-_23261684 NM_002318	-6352	-	AK222477 AK312266 TSC_hg19_v1_chr8_-_23261634 BC020481 AK293292	-6401	-	TSC_hg19_v1_chr8_-_23261631 U89942	-6422	-	AJ131358 TSC_hg19_v1_chr8_-_23315161 AK300464 AF016032	47104	-	TSC_hg19_v1_chr8_-_23315197 BC034477 NM_001128930 NM_004901	47163	-	NM_016612 TSC_hg19_v1_chr8_+_23386375	118320	+	NM_002318|LOXL2|4017|lysyl oxidase-like 2##AK222477|LOXL2|4017|lysyl oxidase-like 2##AK312266|LOXL2|4017|lysyl oxidase-like 2##BC020481|LOXL2|4017|lysyl oxidase-like 2##AK293292|LOXL2|4017|lysyl oxidase-like 2##U89942|LOXL2|4017|lysyl oxidase-like 2##AJ131358|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AK300464|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AF016032|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##BC034477|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_001128930|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_004901|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_016612|SLC25A37|51312|solute carrier family 25, member 37	0.407665	CTCF.p2:8:0.408
chr1	68808550	68808663	reg1001516.p1	13.709	+	TSC_hg19_v1_chr1_-_68698207 BC137109 BC137113 BC110826 AB097018 AK074984 AK301613 BX648748 BX538320 NM_001002292 NM_001193334 AK074583 AK309779 DQ323735 AY359035 NM_024911	-110449	-	BC005362 U96750 NM_004675	-292221	-	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	-509496	-	AK289925 BC075035 BC075036 NM_000329 U18991	107030	-	CU688044 BC065304 BC011743 BC035506 BC041580 TSC_hg19_v1_chr1_-_68962723	154095	-	TSC_hg19_v1_chr1_-_68962766 AK225735 BC003511 AB281187 AB281274 AK000361 AK299324 NM_001114120 NM_017779	154175	-	BC137109|WLS|79971|wntless homolog (Drosophila)##BC137113|WLS|79971|wntless homolog (Drosophila)##BC110826|WLS|79971|wntless homolog (Drosophila)##AB097018|WLS|79971|wntless homolog (Drosophila)##AK074984|WLS|79971|wntless homolog (Drosophila)##AK301613|WLS|79971|wntless homolog (Drosophila)##BX648748|WLS|79971|wntless homolog (Drosophila)##BX538320|WLS|79971|wntless homolog (Drosophila)##NM_001002292|WLS|79971|wntless homolog (Drosophila)##NM_001193334|WLS|79971|wntless homolog (Drosophila)##AK074583|WLS|79971|wntless homolog (Drosophila)##AK309779|WLS|79971|wntless homolog (Drosophila)##DQ323735|WLS|79971|wntless homolog (Drosophila)##AY359035|WLS|79971|wntless homolog (Drosophila)##NM_024911|WLS|79971|wntless homolog (Drosophila)##BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC065304|DEPDC1|55635|DEP domain containing 1##BC011743|DEPDC1|55635|DEP domain containing 1##BC035506|DEPDC1|55635|DEP domain containing 1##BC041580|DEPDC1|55635|DEP domain containing 1##AK225735|DEPDC1|55635|DEP domain containing 1##BC003511|DEPDC1|55635|DEP domain containing 1##AB281187|DEPDC1|55635|DEP domain containing 1##AB281274|DEPDC1|55635|DEP domain containing 1##AK000361|DEPDC1|55635|DEP domain containing 1##AK299324|DEPDC1|55635|DEP domain containing 1##NM_001114120|DEPDC1|55635|DEP domain containing 1##NM_017779|DEPDC1|55635|DEP domain containing 1	0.805227	CTCF.p2:11:0.805
chr10	98841516	98841623	reg1003492.p1	13.708	+	AK126886 BC024315 NM_015652 CU692918	-100502	+	TSC_hg19_v1_chr10_+_98592758 NM_032440 AL834245 AB058698	-248841	+	TSC_hg19_v1_chr10_-_98592186 AB593180	-249369	-	AY029183 AB383997 TSC_hg19_v1_chr10_-_98945570	103905	-	TSC_hg19_v1_chr10_-_98945606 BC146851	104026	-	AB017167 TSC_hg19_v1_chr10_-_98945702 BC028105 AB011537 BC146761 NM_003061 BC139909	104116	-	AK126886|C10orf12|26148|chromosome 10 open reading frame 12##BC024315|C10orf12|26148|chromosome 10 open reading frame 12##NM_015652|C10orf12|26148|chromosome 10 open reading frame 12##NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor##AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor##AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor##AY029183|SLIT1|6585|slit homolog 1 (Drosophila)##BC146851|SLIT1|6585|slit homolog 1 (Drosophila)##AB017167|SLIT1|6585|slit homolog 1 (Drosophila)##BC028105|SLIT1|6585|slit homolog 1 (Drosophila)##AB011537|SLIT1|6585|slit homolog 1 (Drosophila)##BC146761|SLIT1|6585|slit homolog 1 (Drosophila)##NM_003061|SLIT1|6585|slit homolog 1 (Drosophila)##BC139909|SLIT1|6585|slit homolog 1 (Drosophila)	0.032109	
chr11	122451323	122451449	reg1004003.p1	13.708	+	BC130361 BC130363 AF303179 NM_001001786	-464525	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-990288	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-1128211	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	75161	+	BC070266 AK313578 AF001622 NM_019604	257843	+	AK097534 BC068507 NM_024806 NM_199124	302045	+	BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63	1.009759	CTCF.p2:-10:0.999
chr14	55627823	55627963	reg1004891.p1	13.708	+	TSC_hg19_v1_chr14_+_55595969 AB006780 BC053667 BC068068 M36682 BC001120 M35368 M57710	-31908	+	TSC_hg19_v1_chr14_+_55595963 NM_001177388 NM_002306 AK314929	-31945	+	AK025580 TSC_hg19_v1_chr14_+_55518408 BC015621	-109462	+	TSC_hg19_v1_chr14_-_55650349 BT007344	22513	-	TSC_hg19_v1_chr14_-_55658298 BX248255 D13633 AK291847 AK299338 BC010658 AK297480 AB076695 NM_001146015 NM_014750	30407	-	NM_017943 AK092879 AX747787 TSC_hg19_v1_chr14_+_55738097 BC109120 BC109121	110166	+	AB006780|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC053667|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC068068|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M36682|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC001120|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M35368|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M57710|LGALS3|3958|lectin, galactoside-binding, soluble, 3##NM_001177388|LGALS3|3958|lectin, galactoside-binding, soluble, 3##NM_002306|LGALS3|3958|lectin, galactoside-binding, soluble, 3##AK314929|LGALS3|3958|lectin, galactoside-binding, soluble, 3##AK025580|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##BC015621|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##BX248255|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##D13633|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK291847|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK299338|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##BC010658|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK297480|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AB076695|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_001146015|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_014750|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_017943|FBXO34|55030|F-box protein 34##AK092879|FBXO34|55030|F-box protein 34##BC109120|FBXO34|55030|F-box protein 34##BC109121|FBXO34|55030|F-box protein 34	0.044792	
chr17	1812149	1812266	reg1004125.p1	13.707	+	TSC_hg19_v1_chr17_+_1733335 M63488 AB209732 BC018126 AB385027 HQ258560	-78858	+	TSC_hg19_v1_chr17_+_1733284 NM_002945 AK289704	-78923	+	TSC_hg19_v1_chr17_-_1733157 BC035077 AK095369 NM_052928	-79069	-	BC128608 NM_178568	115970	-	TSC_hg19_v1_chr17_+_1933446 S81752 U34880 AF321876 NM_001383 AK314015 BC096086 BC096087 BC096088 BC096089 BC003099	121214	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	133101	+	M63488|RPA1|6117|replication protein A1, 70kDa##AB209732|RPA1|6117|replication protein A1, 70kDa##BC018126|RPA1|6117|replication protein A1, 70kDa##HQ258560|RPA1|6117|replication protein A1, 70kDa##NM_002945|RPA1|6117|replication protein A1, 70kDa##AK289704|RPA1|6117|replication protein A1, 70kDa##BC035077|SMYD4|114826|SET and MYND domain containing 4##AK095369|SMYD4|114826|SET and MYND domain containing 4##NM_052928|SMYD4|114826|SET and MYND domain containing 4##BC128608|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_178568|RTN4RL1|146760|reticulon 4 receptor-like 1##S81752|DPH1|1801|DPH1 homolog (S. cerevisiae)##U34880|DPH1|1801|DPH1 homolog (S. cerevisiae)##AF321876|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_001383|DPH1|1801|DPH1 homolog (S. cerevisiae)##AK314015|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096086|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096087|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096088|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096089|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC003099|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2	0.985205	CTCF.p2:-1:0.985
chr2	219717705	219717828	reg1005239.p1	13.706	+	AJ249977 BC098102 BC098255 BC098277 BC098306 NM_017431 AK300078 AK300687 AK309865	-21248	-	X59812 TSC_hg19_v1_chr2_+_219646869 AK290418 M62401 BC040430 BC051851 AK310782 CU690866 AY178622	-70875	+	TSC_hg19_v1_chr2_+_219646471 AK226039 NM_000784 BC017044	-71292	+	AY009401 NM_006522 AK075522 AB059570 DQ890770 BC004329 AB590154 BT007456	6886	+	BC052234 AK024363 NM_025216 BC040026	27497	+	TSC_hg19_v1_chr2_+_219824381 BC041771 NM_003936 U34051	106643	+	AJ249977|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098102|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098255|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098277|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098306|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##NM_017431|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300078|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300687|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK309865|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AY009401|WNT6|7475|wingless-type MMTV integration site family, member 6##NM_006522|WNT6|7475|wingless-type MMTV integration site family, member 6##AK075522|WNT6|7475|wingless-type MMTV integration site family, member 6##AB059570|WNT6|7475|wingless-type MMTV integration site family, member 6##DQ890770|WNT6|7475|wingless-type MMTV integration site family, member 6##BC004329|WNT6|7475|wingless-type MMTV integration site family, member 6##BT007456|WNT6|7475|wingless-type MMTV integration site family, member 6##BC052234|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AK024363|WNT10A|80326|wingless-type MMTV integration site family, member 10A##NM_025216|WNT10A|80326|wingless-type MMTV integration site family, member 10A##BC040026|WNT10A|80326|wingless-type MMTV integration site family, member 10A##BC041771|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##NM_003936|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##U34051|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)	0.970632	CTCF.p2:-22:0.971
chr6	34122642	34122751	reg1003143.p1	13.706	+	AB385221 EU432124 HQ258665 HQ258669 U92457 BC130526 BC130528 BC144057 NM_000841 X80818 AK308669	-21294	-	BC112314 BC143981 Y00695 BC069675 NM_001040109 NM_001184698 NM_002418	-350922	-	BC039864 NM_181336 TSC_hg19_v1_chr6_-_33756906	-365786	-	NM_002131 NM_145899 NM_145903 TSC_hg19_v1_chr6_+_34204617	81915	+	TSC_hg19_v1_chr6_+_34204649 AK096863 M23616 M23617 NM_145901 NM_145902 AK301434	81954	+	TSC_hg19_v1_chr6_+_34204678 X14957 X14958 AK308245	81975	+	EU432124|GRM4|2914|glutamate receptor, metabotropic 4##HQ258665|GRM4|2914|glutamate receptor, metabotropic 4##HQ258669|GRM4|2914|glutamate receptor, metabotropic 4##U92457|GRM4|2914|glutamate receptor, metabotropic 4##BC130526|GRM4|2914|glutamate receptor, metabotropic 4##BC130528|GRM4|2914|glutamate receptor, metabotropic 4##BC144057|GRM4|2914|glutamate receptor, metabotropic 4##NM_000841|GRM4|2914|glutamate receptor, metabotropic 4##X80818|GRM4|2914|glutamate receptor, metabotropic 4##BC112314|MLN|4295|motilin##BC143981|MLN|4295|motilin##Y00695|MLN|4295|motilin##BC069675|MLN|4295|motilin##NM_001040109|MLN|4295|motilin##NM_001184698|MLN|4295|motilin##NM_002418|MLN|4295|motilin##BC039864|LEMD2|221496|LEM domain containing 2##NM_181336|LEMD2|221496|LEM domain containing 2##NM_002131|HMGA1|3159|high mobility group AT-hook 1##NM_145899|HMGA1|3159|high mobility group AT-hook 1##NM_145903|HMGA1|3159|high mobility group AT-hook 1##AK096863|HMGA1|3159|high mobility group AT-hook 1##M23616|HMGA1|3159|high mobility group AT-hook 1##M23617|HMGA1|3159|high mobility group AT-hook 1##NM_145901|HMGA1|3159|high mobility group AT-hook 1##NM_145902|HMGA1|3159|high mobility group AT-hook 1##AK301434|HMGA1|3159|high mobility group AT-hook 1##X14957|HMGA1|3159|high mobility group AT-hook 1##X14958|HMGA1|3159|high mobility group AT-hook 1##AK308245|HMGA1|3159|high mobility group AT-hook 1	0.432901	CTCF.p2:11:0.433
chr7	73864364	73864528	reg1003789.p2	13.706	+	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	-160659	+	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	-195710	-	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	-195735	-	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	3718	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	3862	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	3989	+	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1	0.997537	CTCF.p2:-3:0.998
chr6	36583079	36583212	reg1003630.p1	13.705	+	TSC_hg19_v1_chr6_+_36562140 AK304097 D28423 BC000914 BC069018 AF107405	-20965	+	TSC_hg19_v1_chr6_+_36562138 AK312553	-21009	+	NM_003017 TSC_hg19_v1_chr6_+_36562093	-21054	+	NM_001220777 NM_078467	61106	+	NM_000389 TSC_hg19_v1_chr6_+_36646486 AK309512 NM_001220778 U09579	63326	+	TSC_hg19_v1_chr6_+_36646490 BC013967 AB209881 BC001935 BC000312 L25610 L26165 U03106 S67388 BC000275 L47232 L47233 AY008263	63380	+	AK304097|SRSF3|6428|serine/arginine-rich splicing factor 3##BC000914|SRSF3|6428|serine/arginine-rich splicing factor 3##BC069018|SRSF3|6428|serine/arginine-rich splicing factor 3##AF107405|SRSF3|6428|serine/arginine-rich splicing factor 3##AK312553|SRSF3|6428|serine/arginine-rich splicing factor 3##NM_003017|SRSF3|6428|serine/arginine-rich splicing factor 3##NM_001220777|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_078467|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_000389|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK309512|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_001220778|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U09579|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC013967|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AB209881|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC001935|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000312|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L25610|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L26165|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U03106|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##S67388|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000275|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47232|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47233|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)	0.897258	CTCF.p2:-34:0.897
chr13	34651353	34651533	reg1004124.p2	13.704	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	-259159	+	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	-259216	+	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	-400508	-	TSC_hg19_v1_chr13_+_35516429 NM_015678 AF467288	865015	+	BC028170 AB593021 TSC_hg19_v1_chr13_-_36050827 AB593022 AK313185 AB073388 NM_005584	1399353	-	AK294737 NM_001204197 TSC_hg19_v1_chr13_+_36050945 AK315939	1399482	+	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_015678|NBEA|26960|neurobeachin##AF467288|NBEA|26960|neurobeachin##BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK294737|NBEA|26960|neurobeachin##NM_001204197|NBEA|26960|neurobeachin##AK315939|NBEA|26960|neurobeachin	0.994693	CTCF.p2:4:0.995
chr19	13991022	13991168	reg1001657.p1	13.704	+	BC101209 BC101210 NM_001098622	-3033	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	-43993	-	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-84850	+	AK097431 NM_024323	25813	-	NM_017721 TSC_hg19_v1_chr19_+_14017006	25885	+	TSC_hg19_v1_chr19_+_14017013 AB097002	25915	+	BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57##NM_017721|CC2D1A|54862|coiled-coil and C2 domain containing 1A##AB097002|CC2D1A|54862|coiled-coil and C2 domain containing 1A	1.129173	CTCF.p2:-64:0.999
chr15	90686484	90686620	reg1005087.p1	13.703	+	TSC_hg19_v1_chr15_-_90645713 AK312627	-40825	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	-40847	-	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	-40890	-	TSC_hg19_v1_chr15_+_90728151 NM_020210 AK289991 AY358392	41644	+	TSC_hg19_v1_chr15_+_90744561 AY445887 NM_198925 AB051532 BC126438 BC144141 BC110853 AB385501 HQ258520 AK026108	58138	+	TSC_hg19_v1_chr15_-_90777138 AB451276 AB451406 AB463454 CR456955 DQ891196 DQ894379	90576	-	AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_020210|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK289991|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY358392|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY445887|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_198925|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB051532|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC126438|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC144141|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC110853|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##HQ258520|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK026108|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB451276|CIB1|10519|calcium and integrin binding 1 (calmyrin)##AB451406|CIB1|10519|calcium and integrin binding 1 (calmyrin)##CR456955|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ891196|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ894379|CIB1|10519|calcium and integrin binding 1 (calmyrin)	0.997679	CTCF.p2:5:0.998
chr8	41386390	41386550	reg1004069.p1	13.702	+	AF068291 TSC_hg19_v1_chr8_+_41348140 BC012032 NM_001002296	-38321	+	TSC_hg19_v1_chr8_+_41348114 AB104615 BC001227 AF125102	-38358	+	TSC_hg19_v1_chr8_+_41348100 AK026613	-38371	+	NM_032336 AK299207 BC027454 TSC_hg19_v1_chr8_+_41386745 BC005995	267	+	TSC_hg19_v1_chr8_+_41386779 AK095334 AK313373	302	+	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	49224	+	AF068291|GOLGA7|51125|golgin A7##BC012032|GOLGA7|51125|golgin A7##NM_001002296|GOLGA7|51125|golgin A7##AB104615|GOLGA7|51125|golgin A7##BC001227|GOLGA7|51125|golgin A7##AF125102|GOLGA7|51125|golgin A7##AK026613|GOLGA7|51125|golgin A7##NM_032336|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK299207|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC027454|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC005995|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK095334|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK313373|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)	0.076557	
chrX	109693444	109693553	reg1003249.p1	13.702	+	AK091430 NM_001171689	-10040	-	AB037739 AY121804 NM_020769	-31214	+	TSC_hg19_v1_chrX_-_109561428 AJ007014	-132052	-	BC002909 AK293106 AK297563 AK312270 NM_145234	345535	-	NM_001143981 NM_001143982 NM_001143983	345787	-	AK290504 NM_001128166 NM_001128167 TSC_hg19_v1_chrX_+_110187624 AK315284	494049	+	AK091430|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001171689|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AB037739|RGAG1|57529|retrotransposon gag domain containing 1##AY121804|RGAG1|57529|retrotransposon gag domain containing 1##NM_020769|RGAG1|57529|retrotransposon gag domain containing 1##AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC002909|CHRDL1|91851|chordin-like 1##AK293106|CHRDL1|91851|chordin-like 1##AK297563|CHRDL1|91851|chordin-like 1##AK312270|CHRDL1|91851|chordin-like 1##NM_145234|CHRDL1|91851|chordin-like 1##NM_001143981|CHRDL1|91851|chordin-like 1##NM_001143982|CHRDL1|91851|chordin-like 1##NM_001143983|CHRDL1|91851|chordin-like 1##AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	0.993013	CTCF.p2:-5:0.993
chr16	48560526	48560652	reg1004947.p1	13.701	+	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	-141337	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	-160798	-	BC042550 TSC_hg19_v1_chr16_-_48399765	-160829	-	BC051897 TSC_hg19_v1_chr16_-_48644092 AB014515 BC152472 NM_153029	83527	-	AB527638 TSC_hg19_v1_chr16_-_49315397	754804	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	754911	-	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC042550|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC051897|N4BP1|9683|NEDD4 binding protein 1##AB014515|N4BP1|9683|NEDD4 binding protein 1##BC152472|N4BP1|9683|NEDD4 binding protein 1##NM_153029|N4BP1|9683|NEDD4 binding protein 1##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor	0.83552	CTCF.p2:12:0.836
chr2	171830017	171830173	reg1002317.p2	13.701	+	TSC_hg19_v1_chr2_+_171785781 AK298020 BC007770 BC001408 AK296698 AK027349 AB528359 DQ892715 DQ895965 CU675801	-44281	+	TSC_hg19_v1_chr2_+_171785776 AK315508 AK023201 AK225810 AK293640 AK023082	-44394	+	NM_001201428 AL117430 AK125761 NM_015530	-45104	+	AK301857 NM_001136555	93387	-	TSC_hg19_v1_chr2_-_172017240 DQ890904 DQ894057 BC032657 D50927 AK292508 AF162666 AB004885	187001	-	TSC_hg19_v1_chr2_-_172017431 AK091975 NM_012290	187404	-	AK298020|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC007770|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC001408|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK296698|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK027349|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ892715|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ895965|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK315508|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023201|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK225810|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK293640|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023082|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##NM_001201428|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AL117430|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK125761|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##NM_015530|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK301857|TLK1|9874|tousled-like kinase 1##NM_001136555|TLK1|9874|tousled-like kinase 1##DQ890904|TLK1|9874|tousled-like kinase 1##DQ894057|TLK1|9874|tousled-like kinase 1##BC032657|TLK1|9874|tousled-like kinase 1##D50927|TLK1|9874|tousled-like kinase 1##AK292508|TLK1|9874|tousled-like kinase 1##AF162666|TLK1|9874|tousled-like kinase 1##AB004885|TLK1|9874|tousled-like kinase 1##AK091975|TLK1|9874|tousled-like kinase 1##NM_012290|TLK1|9874|tousled-like kinase 1	0.999466	CTCF.p2:14:0.999
chr4	18368763	18368875	reg1004411.p1	13.701	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-345353	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-556208	+	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	-556546	-	AB017168 NM_004787 BC117190 BC143978 AF133270	1886517	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	2333248	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	2616810	-	AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16##AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4	0.948556	CTCF.p2:2:0.949
chr11	11809422	11809543	reg1004799.p1	13.700	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	-165904	-	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-929696	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-929964	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	53534	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	54009	+	TSC_hg19_v1_chr11_+_11863521 BC071559 AK027362 AK092290 AX747455	54086	+	AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47##BC071559|USP47|55031|ubiquitin specific peptidase 47##AK027362|USP47|55031|ubiquitin specific peptidase 47##AK092290|USP47|55031|ubiquitin specific peptidase 47	0.999755	CTCF.p2:12:1.000
chr11	64122634	64122765	reg1003335.p1	13.700	+	TSC_hg19_v1_chr11_+_64120348 AK126728	-2340	+	TSC_hg19_v1_chr11_+_64107692 BC151218 BC151222 NM_032251 AK090436 BC140822 BC140824 BC141866	-14997	+	TSC_hg19_v1_chr11_+_64085676 AF124993 AF110731 BC113723 BC113725 BC143849 BC171733 AF112212 AF242525 AF231705 CR457203 HQ258129 AJ249483	-36977	+	TSC_hg19_v1_chr11_+_64126642 AK223561 NM_001006944 NM_003942 AJ010119 AK292163 AK313567 BC047896 AK298507 BC028079 CU690526 AF074715	4032	+	AK290791 BC034384 NM_018484 AK129930	200426	+	AB050269 NM_144585 NM_153378	235582	+	AK126728|CCDC88B|283234|coiled-coil domain containing 88B##BC151218|CCDC88B|283234|coiled-coil domain containing 88B##BC151222|CCDC88B|283234|coiled-coil domain containing 88B##NM_032251|CCDC88B|283234|coiled-coil domain containing 88B##AK090436|CCDC88B|283234|coiled-coil domain containing 88B##BC140822|CCDC88B|283234|coiled-coil domain containing 88B##BC140824|CCDC88B|283234|coiled-coil domain containing 88B##BC141866|CCDC88B|283234|coiled-coil domain containing 88B##AF124993|PRDX5|25824|peroxiredoxin 5##AF110731|PRDX5|25824|peroxiredoxin 5##BC113723|PRDX5|25824|peroxiredoxin 5##BC113725|PRDX5|25824|peroxiredoxin 5##BC143849|PRDX5|25824|peroxiredoxin 5##BC171733|PRDX5|25824|peroxiredoxin 5##AF112212|PRDX5|25824|peroxiredoxin 5##AF242525|PRDX5|25824|peroxiredoxin 5##AF231705|PRDX5|25824|peroxiredoxin 5##CR457203|PRDX5|25824|peroxiredoxin 5##HQ258129|PRDX5|25824|peroxiredoxin 5##AJ249483|PRDX5|25824|peroxiredoxin 5##AK223561|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_001006944|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_003942|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AJ010119|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK292163|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK313567|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC047896|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK298507|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC028079|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AF074715|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK290791|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##BC034384|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##NM_018484|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AK129930|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AB050269|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_144585|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_153378|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12	0.0	
chr15	99202572	99202680	reg1003227.p1	13.700	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-9870	+	TSC_hg19_v1_chr15_+_99191767 AB425196	-10655	+	AK097062 AK097062 NM_182562	-145016	-	BC104743 BC104744 BC105686 NM_001102612	346211	-	AK058162 NM_001167902	348397	-	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	442614	+	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein	0.950658	CTCF.p2:9:0.951
chr4	40151632	40151751	reg1002561.p1	13.699	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-93159	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-172098	-	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	-172353	-	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	46950	+	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	185754	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	364893	-	AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47	0.999838	CTCF.p2:-7:1.000
chr19	39902553	39902698	reg1003919.p1	13.698	+	TSC_hg19_v1_chr19_+_39899749 AJ227917	-2832	+	TSC_hg19_v1_chr19_+_39897486 AK314042 M92843 NM_003407 BC009693 M63625 EU446714 EU832179 EU832272 CU679443	-4851	+	TSC_hg19_v1_chr19_+_39882046 AL137304 AK000411 AK298014 BC019015 AK092909 AX747802 AK124629 AK316010 AK090877 AK297772 AX746660 AK294667	-20587	+	AK024429 NM_022835	1124	+	CU678668 CU687136 DQ893449 DQ896219 TSC_hg19_v1_chr19_-_39926589 BC024970 BC007977 BC071674 M60854 BC095429 BC004324 AK055869 AK315498 D28392 NM_001020	23951	-	NM_001111020 NM_001130824 NM_001130825 TSC_hg19_v1_chr19_+_39936212 AB000516	33573	+	AK314042|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##M92843|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##NM_003407|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##BC009693|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##M63625|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU446714|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU832179|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU832272|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##AL137304|MED29|55588|mediator complex subunit 29##AK000411|MED29|55588|mediator complex subunit 29##AK298014|MED29|55588|mediator complex subunit 29##BC019015|MED29|55588|mediator complex subunit 29##AK092909|MED29|55588|mediator complex subunit 29##AK124629|MED29|55588|mediator complex subunit 29##AK316010|MED29|55588|mediator complex subunit 29##AK090877|MED29|55588|mediator complex subunit 29##AK297772|MED29|55588|mediator complex subunit 29##AK294667|MED29|55588|mediator complex subunit 29##AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2##NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2##DQ893449|RPS16|6217|ribosomal protein S16##DQ896219|RPS16|6217|ribosomal protein S16##BC024970|RPS16|6217|ribosomal protein S16##BC007977|RPS16|6217|ribosomal protein S16##BC071674|RPS16|6217|ribosomal protein S16##M60854|RPS16|6217|ribosomal protein S16##BC095429|RPS16|6217|ribosomal protein S16##BC004324|RPS16|6217|ribosomal protein S16##AK055869|RPS16|6217|ribosomal protein S16##AK315498|RPS16|6217|ribosomal protein S16##D28392|RPS16|6217|ribosomal protein S16##NM_001020|RPS16|6217|ribosomal protein S16##NM_001111020|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##NM_001130824|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##NM_001130825|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##AB000516|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)	0.954603	CTCF.p2:-3:0.955
chr19	5048405	5048532	reg1003807.p1	13.697	+	TSC_hg19_v1_chr19_+_5032899 CU687848	-15569	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-79295	+	NM_015015 TSC_hg19_v1_chr19_+_4969124	-79344	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	292326	-	AK098722 NM_181710 AK292251 BC017592	406958	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	574290	-	AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##NM_015015|KDM4B|23030|lysine (K)-specific demethylase 4B##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2	0.986908	CTCF.p2:-5:0.987
chr8	52438712	52438867	reg1003299.p2	13.697	+	AJ003030 NM_018967	-1614193	+	NM_001007176 BC017981 AJ276240	-2453880	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-2604879	-	EU170240 AY877349 NM_144651	283164	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	372813	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	372938	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.96885	CTCF.p2:13:0.969
chr14	96565204	96565313	reg1003470.p1	13.696	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	-59612	+	AK023027 TSC_hg19_v1_chr14_+_96342762	-222513	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-384791	-	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	105819	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	105938	+	AK291970 AK309528 NM_000710 TSC_hg19_v1_chr14_+_96722546 U30271 AJ238044	157296	+	NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##AK023027|LOC100507043|100507043|uncharacterized LOC100507043##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2##AK291970|BDKRB1|623|bradykinin receptor B1##AK309528|BDKRB1|623|bradykinin receptor B1##NM_000710|BDKRB1|623|bradykinin receptor B1##U30271|BDKRB1|623|bradykinin receptor B1##AJ238044|BDKRB1|623|bradykinin receptor B1	1.534865	CTCF.p2:11:0.834	CTCF.p2:-87:0.701
chrX	114565275	114565399	reg1003206.p1	13.692	+	NM_016383 AK093369 AX748081 AK314765 AF124430 BC128134 BC128135	-41032	+	AB587552 TSC_hg19_v1_chrX_-_114468623 BC125223 BC125224 BX647193 NM_001243963 NM_020871	-96718	-	NM_001145346 AK301904	-141362	+	NM_005032	229839	+	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	230269	+	TSC_hg19_v1_chrX_-_114797027 AK127380	231705	-	NM_016383|LUZP4|51213|leucine zipper protein 4##AK093369|LUZP4|51213|leucine zipper protein 4##AK314765|LUZP4|51213|leucine zipper protein 4##AF124430|LUZP4|51213|leucine zipper protein 4##BC128134|LUZP4|51213|leucine zipper protein 4##BC128135|LUZP4|51213|leucine zipper protein 4##BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_001243963|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_001145346|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##AK301904|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##NM_005032|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3	0.999674	CTCF.p2:-19:1.000
chr2	102035673	102035790	reg1004036.p1	13.691	+	TSC_hg19_v1_chr2_-_102003966 BC032949 BC047514 NM_153836 AB046109	-31742	-	TSC_hg19_v1_chr2_-_102003859 AK094970	-31868	-	AM392566 AB463234 TSC_hg19_v1_chr2_-_101925153 BC019355 BC032328 AK074985 AK075141 AY450390 BC045743 AK129799 NM_173647	-110589	-	AK131289 AK298610 NM_001145664 TSC_hg19_v1_chr2_-_102091212	55462	-	TSC_hg19_v1_chr2_+_102314168 NM_001242560 NM_004834 NM_145686 BC064691 AK296396 AF096300 NM_001242559 NM_145687 AB384511 AY212247 AY834276	278621	+	TSC_hg19_v1_chr2_+_102508334 BC045694	472611	+	BC032949|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC047514|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_153836|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AB046109|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AK094970|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AM392566|RNF149|284996|ring finger protein 149##BC019355|RNF149|284996|ring finger protein 149##BC032328|RNF149|284996|ring finger protein 149##AK074985|RNF149|284996|ring finger protein 149##AK075141|RNF149|284996|ring finger protein 149##AY450390|RNF149|284996|ring finger protein 149##BC045743|RNF149|284996|ring finger protein 149##AK129799|RNF149|284996|ring finger protein 149##NM_173647|RNF149|284996|ring finger protein 149##AK131289|RFX8|731220|regulatory factor X, 8##AK298610|RFX8|731220|regulatory factor X, 8##NM_001145664|RFX8|731220|regulatory factor X, 8##NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	0.980875	CTCF.p2:-29:0.981
chr11	17526240	17526363	reg1003941.p1	13.689	+	TSC_hg19_v1_chr11_-_17498427 NM_000352	-27865	-	U63421 HM635782 TSC_hg19_v1_chr11_-_17498355 AK297560 AF087138 L78207 AB209084	-27958	-	BC040617 AK301550 NM_001166290 TSC_hg19_v1_chr11_-_17410958	-115391	-	CU677569 TSC_hg19_v1_chr11_-_17565964 AK290788 AK300936 AB018687 BC016057 AF039699 AF039700 AK225614 NM_005709 NM_153676	39616	-	NM_002478 AK314968 TSC_hg19_v1_chr11_+_17741117 BC000353 X56677 BC064493 AB463907 BT007157	214918	+	NM_001112741 NM_004976 AB529092	231218	+	NM_000352|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##U63421|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##HM635782|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AK297560|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AF087138|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##L78207|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AB209084|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##BC040617|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##AK301550|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##NM_001166290|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##AK290788|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK300936|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AB018687|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##BC016057|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039699|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039700|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK225614|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_005709|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_153676|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_002478|MYOD1|4654|myogenic differentiation 1##AK314968|MYOD1|4654|myogenic differentiation 1##X56677|MYOD1|4654|myogenic differentiation 1##BC064493|MYOD1|4654|myogenic differentiation 1##BT007157|MYOD1|4654|myogenic differentiation 1##NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1	0.938083	CTCF.p2:5:0.938
chr2	163077625	163077745	reg1004468.p1	13.689	+	NM_002054	-68772	-	BC065265 NM_001935 TSC_hg19_v1_chr2_-_162931062	-146629	-	TSC_hg19_v1_chr2_-_162930636 AK314798	-147053	-	BC026250 AF007822 U76833 AK315448 AK309260 AK297118 NM_004460 U09278	22275	-	CU692330 BC111750 AY017378 AF095844 NM_022168 BC078180 TSC_hg19_v1_chr2_-_163175195 BC046208 AK292941 AK314611	97398	-	NM_012198 TSC_hg19_v1_chr2_+_163200610	122913	+	NM_002054|GCG|2641|glucagon##BC065265|DPP4|1803|dipeptidyl-peptidase 4##NM_001935|DPP4|1803|dipeptidyl-peptidase 4##AK314798|DPP4|1803|dipeptidyl-peptidase 4##BC026250|FAP|2191|fibroblast activation protein, alpha##AF007822|FAP|2191|fibroblast activation protein, alpha##U76833|FAP|2191|fibroblast activation protein, alpha##AK315448|FAP|2191|fibroblast activation protein, alpha##AK309260|FAP|2191|fibroblast activation protein, alpha##AK297118|FAP|2191|fibroblast activation protein, alpha##NM_004460|FAP|2191|fibroblast activation protein, alpha##U09278|FAP|2191|fibroblast activation protein, alpha##BC111750|IFIH1|64135|interferon induced with helicase C domain 1##AY017378|IFIH1|64135|interferon induced with helicase C domain 1##AF095844|IFIH1|64135|interferon induced with helicase C domain 1##NM_022168|IFIH1|64135|interferon induced with helicase C domain 1##BC078180|IFIH1|64135|interferon induced with helicase C domain 1##BC046208|IFIH1|64135|interferon induced with helicase C domain 1##AK292941|IFIH1|64135|interferon induced with helicase C domain 1##AK314611|IFIH1|64135|interferon induced with helicase C domain 1##NM_012198|GCA|25801|grancalcin, EF-hand calcium binding protein	0.999492	CTCF.p2:-1:0.999
chr19	44023744	44023878	reg1005407.p1	13.688	+	BC029299 NM_198850 BC070094	-14776	-	CU691666 AY359006 BC041061 BC039167 AJ223603 AK075464 AK290905 AK314773 AF082889 NM_014400	-54035	-	NM_001130011 AY014285 AY359077	-104761	+	TSC_hg19_v1_chr19_-_44031351 AM392804 AB463613 AK309880 BC008250 AK315346 D83198 NM_014297	7550	-	TSC_hg19_v1_chr19_+_44037567 BC043611 NM_174945 AK301820	13701	+	CR456728 AB384718 BC023593 TSC_hg19_v1_chr19_-_44079680 AB208781	55837	-	BC029299|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##NM_198850|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##BC070094|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##AY359006|LYPD3|27076|LY6/PLAUR domain containing 3##BC041061|LYPD3|27076|LY6/PLAUR domain containing 3##BC039167|LYPD3|27076|LY6/PLAUR domain containing 3##AJ223603|LYPD3|27076|LY6/PLAUR domain containing 3##AK075464|LYPD3|27076|LY6/PLAUR domain containing 3##AK290905|LYPD3|27076|LY6/PLAUR domain containing 3##AK314773|LYPD3|27076|LY6/PLAUR domain containing 3##AF082889|LYPD3|27076|LY6/PLAUR domain containing 3##NM_014400|LYPD3|27076|LY6/PLAUR domain containing 3##NM_001130011|TEX101|83639|testis expressed 101##AY014285|TEX101|83639|testis expressed 101##AY359077|TEX101|83639|testis expressed 101##AM392804|ETHE1|23474|ethylmalonic encephalopathy 1##AK309880|ETHE1|23474|ethylmalonic encephalopathy 1##BC008250|ETHE1|23474|ethylmalonic encephalopathy 1##AK315346|ETHE1|23474|ethylmalonic encephalopathy 1##D83198|ETHE1|23474|ethylmalonic encephalopathy 1##NM_014297|ETHE1|23474|ethylmalonic encephalopathy 1##BC043611|ZNF575|284346|zinc finger protein 575##NM_174945|ZNF575|284346|zinc finger protein 575##AK301820|ZNF575|284346|zinc finger protein 575##CR456728|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##BC023593|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##AB208781|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1	0.999891	CTCF.p2:16:1.000
chr9	112945633	112945769	reg1004512.p1	13.687	+	NM_001136562 AK300427	-57909	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	-134738	+	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	-134792	+	NM_001012993	24711	-	AF065241 AF276919 CR407665 AF313911 AY004872 AF085844 BC003377 J04026 BC054866 TSC_hg19_v1_chr9_-_113018788 X77584	73051	-	TSC_hg19_v1_chr9_-_113018817 BX647247 D28376 AK289508	73124	-	NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001012993|C9orf152|401546|chromosome 9 open reading frame 152##AF065241|TXN|7295|thioredoxin##AF276919|TXN|7295|thioredoxin##CR407665|TXN|7295|thioredoxin##AF313911|TXN|7295|thioredoxin##AY004872|TXN|7295|thioredoxin##AF085844|TXN|7295|thioredoxin##BC003377|TXN|7295|thioredoxin##J04026|TXN|7295|thioredoxin##BC054866|TXN|7295|thioredoxin##X77584|TXN|7295|thioredoxin##BX647247|TXN|7295|thioredoxin##D28376|TXN|7295|thioredoxin##AK289508|TXN|7295|thioredoxin	0.995248	CTCF.p2:-16:0.995
chr14	103544736	103544841	reg1003610.p1	13.686	+	BC047871 BC048261 TSC_hg19_v1_chr14_-_103523736 AB032950 BC155541 NM_006035 BC078666 AF128625	-21051	-	AB384568 TSC_hg19_v1_chr14_-_103523568	-21247	-	TSC_hg19_v1_chr14_-_103430941 BX248752	-113830	-	BC113655 BC117375 NM_001077594 HQ258590	21730	+	TSC_hg19_v1_chr14_+_103589771 BC017818	44957	+	M92357 NM_006291 BC128449 BC128450 TSC_hg19_v1_chr14_+_103592873	47980	+	BC047871|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC048261|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AB032950|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC155541|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##NM_006035|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AF128625|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BX248752|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC113655|EXOC3L4|91828|exocyst complex component 3-like 4##BC117375|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001077594|EXOC3L4|91828|exocyst complex component 3-like 4##HQ258590|EXOC3L4|91828|exocyst complex component 3-like 4##BC017818|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	0.994653	CTCF.p2:0:0.995
chr3	101528166	101528278	reg1002824.p1	13.685	+	AK289689 NM_001134456	-29937	+	TSC_hg19_v1_chr3_+_101498080 BC009431	-30134	+	NM_145037 TSC_hg19_v1_chr3_+_101498054	-30174	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	18738	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	40152	+	AY090780 NM_175056 BC143817	625645	+	AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##BC009431|FAM55C|91775|family with sequence similarity 55, member C##NM_145037|FAM55C|91775|family with sequence similarity 55, member C##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1	0.986814	CTCF.p2:4:0.987
chr4	76837261	76837396	reg1005254.p1	13.684	+	BX648754 AF023456 NM_006239	-13701	-	TSC_hg19_v1_chr4_+_76649846 D86326 NM_003715 BC032654 AB590104 AM392946 AM393489 CU689466 DQ894066 EU176195	-187414	+	TSC_hg19_v1_chr4_+_76649814 AK314289	-187513	+	TSC_hg19_v1_chr4_-_76862135 AB161353 AK309271 BC006388 BC011854 NM_001042402 NM_014435	24801	-	TSC_hg19_v1_chr4_-_76878561 AF132198	41233	-	TSC_hg19_v1_chr4_-_76912093 BC054040 BC063797 AK300074 CR749574 BC107895 AK307540 NM_018115	74756	-	BX648754|PPEF2|5470|protein phosphatase, EF-hand calcium binding domain 2##AF023456|PPEF2|5470|protein phosphatase, EF-hand calcium binding domain 2##NM_006239|PPEF2|5470|protein phosphatase, EF-hand calcium binding domain 2##D86326|USO1|8615|USO1 vesicle docking protein homolog (yeast)##NM_003715|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC032654|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AM392946|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AM393489|USO1|8615|USO1 vesicle docking protein homolog (yeast)##DQ894066|USO1|8615|USO1 vesicle docking protein homolog (yeast)##EU176195|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AB161353|NAAA|27163|N-acylethanolamine acid amidase##AK309271|NAAA|27163|N-acylethanolamine acid amidase##BC006388|NAAA|27163|N-acylethanolamine acid amidase##BC011854|NAAA|27163|N-acylethanolamine acid amidase##NM_001042402|NAAA|27163|N-acylethanolamine acid amidase##NM_014435|NAAA|27163|N-acylethanolamine acid amidase##AF132198|SDAD1|55153|SDA1 domain containing 1##BC054040|SDAD1|55153|SDA1 domain containing 1##BC063797|SDAD1|55153|SDA1 domain containing 1##AK300074|SDAD1|55153|SDA1 domain containing 1##CR749574|SDAD1|55153|SDA1 domain containing 1##BC107895|SDAD1|55153|SDA1 domain containing 1##AK307540|SDAD1|55153|SDA1 domain containing 1##NM_018115|SDAD1|55153|SDA1 domain containing 1	0.0	
chr8	30085249	30085389	reg1005940.p1	13.684	+	D84145 NM_006571 TSC_hg19_v1_chr8_+_30013882 AK314128 BC013175 CR456851	-71464	+	NM_001100916 EU518495	-83119	-	TSC_hg19_v1_chr8_+_29952989 AK075363 AF161461 DQ891897 DQ895083 CR541735 CR541760	-132320	+	Z36874 TSC_hg19_v1_chr8_+_30209759	124418	+	NM_001008710 NM_001008711 NM_001008712 NM_006867 AK304858 D84107 D84108 D84109 D84110 TSC_hg19_v1_chr8_+_30242056 BC003608	156690	+	NM_001206847	410797	+	D84145|DCTN6|10671|dynactin 6##NM_006571|DCTN6|10671|dynactin 6##AK314128|DCTN6|10671|dynactin 6##BC013175|DCTN6|10671|dynactin 6##CR456851|DCTN6|10671|dynactin 6##NM_001100916|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##EU518495|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing##NM_006867|RBPMS|11030|RNA binding protein with multiple splicing##AK304858|RBPMS|11030|RNA binding protein with multiple splicing##D84107|RBPMS|11030|RNA binding protein with multiple splicing##D84108|RBPMS|11030|RNA binding protein with multiple splicing##D84109|RBPMS|11030|RNA binding protein with multiple splicing##D84110|RBPMS|11030|RNA binding protein with multiple splicing##BC003608|RBPMS|11030|RNA binding protein with multiple splicing##NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341	0.990396	CTCF.p2:7:0.990
chr12	52557818	52557955	reg1004981.p1	13.683	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	-94088	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	-94132	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	-112670	+	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	27858	-	BC117348 BC126393 BC038743 NM_001242696	46677	-	NM_005556 TSC_hg19_v1_chr12_+_52626966	69076	+	BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80##BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##NM_005556|KRT7|3855|keratin 7	0.999381	CTCF.p2:0:0.999
chr15	73928902	73929038	reg1003652.p1	13.683	+	TSC_hg19_v1_chr15_-_73925720 BC105979 AK129908 AF109126 AF109127 AB209812 BC067828 NM_001161363 NM_001161364 NM_012428 NM_017455	-3244	-	HQ258139 TSC_hg19_v1_chr15_-_73925588 BC117462 BC143880 BC143881 AK313441 AK314248 BC030773 CR936779 AK304478 AK297184	-3384	-	NM_001042367 AK131030 BC055412	-193461	+	TSC_hg19_v1_chr15_+_73976549 AJ583696	47578	+	BC062581 NM_001024736 NM_025240 TSC_hg19_v1_chr15_+_73976629	47664	+	TSC_hg19_v1_chr15_+_73976696 AY358343	47727	+	BC105979|NPTN|27020|neuroplastin##AK129908|NPTN|27020|neuroplastin##AF109126|NPTN|27020|neuroplastin##AF109127|NPTN|27020|neuroplastin##AB209812|NPTN|27020|neuroplastin##BC067828|NPTN|27020|neuroplastin##NM_001161363|NPTN|27020|neuroplastin##NM_001161364|NPTN|27020|neuroplastin##NM_012428|NPTN|27020|neuroplastin##NM_017455|NPTN|27020|neuroplastin##HQ258139|NPTN|27020|neuroplastin##BC117462|NPTN|27020|neuroplastin##BC143880|NPTN|27020|neuroplastin##BC143881|NPTN|27020|neuroplastin##AK313441|NPTN|27020|neuroplastin##AK314248|NPTN|27020|neuroplastin##BC030773|NPTN|27020|neuroplastin##CR936779|NPTN|27020|neuroplastin##AK304478|NPTN|27020|neuroplastin##AK297184|NPTN|27020|neuroplastin##NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60##AK131030|C15orf60|283677|chromosome 15 open reading frame 60##BC055412|C15orf60|283677|chromosome 15 open reading frame 60##BC062581|CD276|80381|CD276 molecule##NM_001024736|CD276|80381|CD276 molecule##NM_025240|CD276|80381|CD276 molecule##AY358343|CD276|80381|CD276 molecule	1.015486	CTCF.p2:30:0.998
chr1	68027460	68027570	reg1003751.p1	13.683	+	TSC_hg19_v1_chr1_-_67896101 NM_001018067 NM_001018068 NM_001018069 NM_015640	-131398	-	BX647139 TSC_hg19_v1_chr1_-_67896097	-131418	-	TSC_hg19_v1_chr1_-_67896086 AK312256	-131430	-	TSC_hg19_v1_chr1_+_68150883 AK314991 NM_001199741 NM_001199742 NM_001924 M60974 BC011757 DQ008445 EF581092 EF614238	123395	+	TSC_hg19_v1_chr1_+_68151094 AB463698 AM393439 DQ893229 DQ896558	123619	+	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	270473	+	NM_001018067|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018068|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018069|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_015640|SERBP1|26135|SERPINE1 mRNA binding protein 1##BX647139|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK312256|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AM393439|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ893229|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ896558|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AK124028|LOC100289178|100289178|uncharacterized LOC100289178	0.141596	
chr17	47645345	47645464	reg1003339.p1	13.683	+	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	-72716	+	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	-153156	-	BC095460 TSC_hg19_v1_chr17_-_47492215	-153189	-	TSC_hg19_v1_chr17_+_47653192 AL834282 NM_007225	7832	+	TSC_hg19_v1_chr17_+_47653475 BC022541 AK308928 AY358526 AB385434	8123	+	TSC_hg19_v1_chr17_-_47755471 BC003385 AK222589 AK312691 AJ000644 AK303268 AK316366 BC001269 AK293587 AK300616 NM_001007226 NM_001007227 NM_001007228 NM_001007229 NM_001007230 NM_003563	110028	-	AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##BC095460|PHB|5245|prohibitin##AL834282|NXPH3|11248|neurexophilin 3##NM_007225|NXPH3|11248|neurexophilin 3##BC022541|NXPH3|11248|neurexophilin 3##AK308928|NXPH3|11248|neurexophilin 3##AY358526|NXPH3|11248|neurexophilin 3##BC003385|SPOP|8405|speckle-type POZ protein##AK222589|SPOP|8405|speckle-type POZ protein##AK312691|SPOP|8405|speckle-type POZ protein##AJ000644|SPOP|8405|speckle-type POZ protein##AK303268|SPOP|8405|speckle-type POZ protein##AK316366|SPOP|8405|speckle-type POZ protein##BC001269|SPOP|8405|speckle-type POZ protein##AK293587|SPOP|8405|speckle-type POZ protein##AK300616|SPOP|8405|speckle-type POZ protein##NM_001007226|SPOP|8405|speckle-type POZ protein##NM_001007227|SPOP|8405|speckle-type POZ protein##NM_001007228|SPOP|8405|speckle-type POZ protein##NM_001007229|SPOP|8405|speckle-type POZ protein##NM_001007230|SPOP|8405|speckle-type POZ protein##NM_003563|SPOP|8405|speckle-type POZ protein	0.027167	
chr8	27930394	27930512	reg1003772.p1	13.681	+	NM_173833	-80085	-	TSC_hg19_v1_chr8_-_27695574 AK301836	-234894	-	TSC_hg19_v1_chr8_-_27695325 AF189722 AB027250 AK027291 AF237709 BC015191 AB027249 NM_018492	-235106	-	AB075870 NM_001010906	10934	-	NM_018091 TSC_hg19_v1_chr8_+_27950679 AK302140 AK296475 AK022626 AK295574 AK001284 AK293424 AK315985 AK316053 AK298265 BC001240 AL834273 AB463602 AM392633	20204	+	NM_006228 U48263 TSC_hg19_v1_chr8_+_28174784 AK289633 AY335948 BC034758	244272	+	NM_173833|SCARA5|286133|scavenger receptor class A, member 5 (putative)##AK301836|PBK|55872|PDZ binding kinase##AF189722|PBK|55872|PDZ binding kinase##AB027250|PBK|55872|PDZ binding kinase##AK027291|PBK|55872|PDZ binding kinase##AF237709|PBK|55872|PDZ binding kinase##BC015191|PBK|55872|PDZ binding kinase##AB027249|PBK|55872|PDZ binding kinase##NM_018492|PBK|55872|PDZ binding kinase##AB075870|C8orf80|389643|chromosome 8 open reading frame 80##NM_001010906|C8orf80|389643|chromosome 8 open reading frame 80##NM_018091|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK302140|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK296475|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK022626|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK295574|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK001284|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK293424|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK315985|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK316053|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK298265|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##BC001240|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AL834273|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AM392633|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##NM_006228|PNOC|5368|prepronociceptin##U48263|PNOC|5368|prepronociceptin##AK289633|PNOC|5368|prepronociceptin##AY335948|PNOC|5368|prepronociceptin##BC034758|PNOC|5368|prepronociceptin	0.640772	CTCF.p2:0:0.641
chr11	32197871	32197983	reg1004421.p1	13.680	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	-85228	+	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	-85450	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-358449	-	AK093168 BC032861 NM_001198551 NM_001198552	254433	-	TSC_hg19_v1_chr11_-_32456950 BC046461	259012	-	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	259142	-	BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1##BC046461|WT1|7490|Wilms tumor 1##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1	0.998578	CTCF.p2:11:0.999
chr16	48721502	48721619	reg1003649.p1	13.680	+	BC051897 TSC_hg19_v1_chr16_-_48644092 AB014515 BC152472 NM_153029	-77444	-	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	-302308	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	-321769	-	AB527638 TSC_hg19_v1_chr16_-_49315397	593833	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	593940	-	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	594174	-	BC051897|N4BP1|9683|NEDD4 binding protein 1##AB014515|N4BP1|9683|NEDD4 binding protein 1##BC152472|N4BP1|9683|NEDD4 binding protein 1##NM_153029|N4BP1|9683|NEDD4 binding protein 1##BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor	0.0	
chr1	120688490	120688599	reg1003593.p2	13.679	+	TSC_hg19_v1_chr1_-_120612318 NM_001200001 NM_024408	-76229	-	TSC_hg19_v1_chr1_-_120612272 BC071562	-76278	-	TSC_hg19_v1_chr1_-_120612211 AK307843	-76338	-	NM_001100910	150460	+	L03419 L03420 TSC_hg19_v1_chr1_-_120935918 BC110416 AK308886	247365	-	AK291502 AK307244 AK311502 NM_001004340 NM_001017986 NM_001244910 TSC_hg19_v1_chr1_-_120935945	247408	-	NM_001200001|NOTCH2|4853|notch 2##NM_024408|NOTCH2|4853|notch 2##BC071562|NOTCH2|4853|notch 2##AK307843|NOTCH2|4853|notch 2##NM_001100910|FAM72B|653820|family with sequence similarity 72, member B##L03419|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##L03420|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##BC110416|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK308886|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK291502|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK307244|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK311502|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001004340|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001017986|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001244910|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)	0.997212	CTCF.p2:9:0.997
chr19	47016832	47016960	reg1005961.p1	13.679	+	TSC_hg19_v1_chr19_-_46999149 AK124720 NM_020709	-17735	-	TSC_hg19_v1_chr19_-_46974789 BC032508 NM_001103149 NM_018215	-42091	-	AL834344 TSC_hg19_v1_chr19_-_46974751 AK290218 BC051688	-42174	-	TSC_hg19_v1_chr19_+_47104390 BC006182	87501	+	AK094504 NM_001205281	87560	-	TSC_hg19_v1_chr19_+_47104543 NM_005184	87624	+	AK124720|PNMAL2|57469|PNMA-like 2##NM_020709|PNMAL2|57469|PNMA-like 2##BC032508|PNMAL1|55228|PNMA-like 1##NM_001103149|PNMAL1|55228|PNMA-like 1##NM_018215|PNMAL1|55228|PNMA-like 1##AL834344|PNMAL1|55228|PNMA-like 1##AK290218|PNMAL1|55228|PNMA-like 1##BC051688|PNMAL1|55228|PNMA-like 1##BC006182|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##AK094504|LOC100506012|100506012|serine/threonine-protein phosphatase 5-like##NM_001205281|LOC100506012|100506012|serine/threonine-protein phosphatase 5-like##NM_005184|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)	0.999091	CTCF.p2:6:0.999
chr6	44047015	44047120	reg1003136.p2	13.679	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	-78693	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-308197	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-308533	+	CR627460 TSC_hg19_v1_chr6_+_44094741	47631	+	TSC_hg19_v1_chr6_-_44095161 AK312086	48093	-	TSC_hg19_v1_chr6_-_44095190 NM_032111	48131	-	BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14##NM_032111|MRPL14|64928|mitochondrial ribosomal protein L14	0.923093	CTCF.p2:6:0.799
chr19	3104256	3104397	reg1000752.p2	13.678	+	TSC_hg19_v1_chr19_+_3094528 BC096225 BC096226 BC096227 AB463701 AF011497 AF493900 CR457004 AB209435	-9735	+	TSC_hg19_v1_chr19_+_3094359 BC089041 NM_002067	-9968	+	TSC_hg19_v1_chr19_-_3062919 AB527754 HQ258149 BC113735 BC113737 NM_198969 AK094591	-41319	-	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	18067	+	TSC_hg19_v1_chr19_+_3122573 BC051315 CU674752	18279	+	TSC_hg19_v1_chr19_+_3136030 GU727645 NM_002068 M63904 AK300481 AK291329 BC013585 GU727637	31818	+	BC096225|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096226|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096227|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF011497|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF493900|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##CR457004|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AB209435|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC089041|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##NM_002067|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##HQ258149|AES|166|amino-terminal enhancer of split##BC113735|AES|166|amino-terminal enhancer of split##BC113737|AES|166|amino-terminal enhancer of split##NM_198969|AES|166|amino-terminal enhancer of split##AK094591|AES|166|amino-terminal enhancer of split##BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##GU727645|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_002068|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##M63904|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK300481|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK291329|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC013585|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##GU727637|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)	0.108339	
chr5	90397738	90397875	reg1004459.p1	13.675	+	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	-543192	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-572440	-	NM_006467 AK295434 U93868	-627104	+	AK091866 TSC_hg19_v1_chr5_-_90610220	212439	-	TSC_hg19_v1_chr5_+_90676181 BC043415	278356	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	281326	-	AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3	0.999848	CTCF.p2:-21:0.963
chr6	84594310	84594461	reg1005987.p1	13.675	+	TSC_hg19_v1_chr6_+_84569438 AB527313 AM393033	-24921	+	TSC_hg19_v1_chr6_+_84569407 AK313146 BC025380 AL832113	-24983	+	TSC_hg19_v1_chr6_+_84569385 NM_016230	-25007	+	TSC_hg19_v1_chr6_+_84743459 AK090775 AX746611 NM_138409 BC010003 AK307078 AK292736 BC039855	149021	+	AB023226 AK308190 BC063632 NM_014895 TSC_hg19_v1_chr6_-_84937334	342939	-	TSC_hg19_v1_chr6_-_85472330 AJ010278	877940	-	AM393033|CYB5R4|51167|cytochrome b5 reductase 4##AK313146|CYB5R4|51167|cytochrome b5 reductase 4##BC025380|CYB5R4|51167|cytochrome b5 reductase 4##AL832113|CYB5R4|51167|cytochrome b5 reductase 4##NM_016230|CYB5R4|51167|cytochrome b5 reductase 4##AK090775|MRAP2|112609|melanocortin 2 receptor accessory protein 2##NM_138409|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC010003|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK307078|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK292736|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC039855|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AB023226|KIAA1009|22832|KIAA1009##AK308190|KIAA1009|22832|KIAA1009##BC063632|KIAA1009|22832|KIAA1009##NM_014895|KIAA1009|22832|KIAA1009##AJ010278|TBX18|9096|T-box 18	0.70233	CTCF.p2:-21:0.702
chr7	101880078	101880206	reg1005276.p1	13.675	+	M74099 NM_181552	-419261	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-420933	+	BC002778 NM_138403	-607567	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	48255	+	TSC_hg19_v1_chr7_+_101928431 AB000520	48301	+	NM_001146210	116746	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.897934	CTCF.p2:12:0.898
chr1	211496917	211497046	reg1005377.p1	13.674	+	TSC_hg19_v1_chr1_+_211433306 NM_018254 AK001738 AB037764 AB463216	-63610	+	BC031608 TSC_hg19_v1_chr1_+_211432894 CU689198	-64103	+	TSC_hg19_v1_chr1_+_211432740 AK300942 AK302664	-64228	+	BC032830 NM_004619	2975	+	NM_001033910 TSC_hg19_v1_chr1_+_211500158	3172	+	TSC_hg19_v1_chr1_+_211500174 AK295766 AK303286 AB000509	3206	+	NM_018254|RCOR3|55758|REST corepressor 3##AK001738|RCOR3|55758|REST corepressor 3##AB037764|RCOR3|55758|REST corepressor 3##BC031608|RCOR3|55758|REST corepressor 3##AK300942|RCOR3|55758|REST corepressor 3##AK302664|RCOR3|55758|REST corepressor 3##BC032830|TRAF5|7188|TNF receptor-associated factor 5##NM_004619|TRAF5|7188|TNF receptor-associated factor 5##NM_001033910|TRAF5|7188|TNF receptor-associated factor 5##AK295766|TRAF5|7188|TNF receptor-associated factor 5##AK303286|TRAF5|7188|TNF receptor-associated factor 5##AB000509|TRAF5|7188|TNF receptor-associated factor 5	0.02515	
chr12	93896934	93897074	reg1005016.p1	13.673	+	NM_014050 NM_172177 TSC_hg19_v1_chr12_+_93861292 AF135160 AF078860 AL136659 AK000285 AF151038 CR749344	-35725	+	TSC_hg19_v1_chr12_-_93836008 NM_003348	-60980	-	TSC_hg19_v1_chr12_-_93835724 BC000396	-61266	-	NM_003877	66593	+	TSC_hg19_v1_chr12_-_93964654 AK123812	67659	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	67816	+	NM_014050|MRPL42|28977|mitochondrial ribosomal protein L42##NM_172177|MRPL42|28977|mitochondrial ribosomal protein L42##AF135160|MRPL42|28977|mitochondrial ribosomal protein L42##AF078860|MRPL42|28977|mitochondrial ribosomal protein L42##AL136659|MRPL42|28977|mitochondrial ribosomal protein L42##AK000285|MRPL42|28977|mitochondrial ribosomal protein L42##AF151038|MRPL42|28977|mitochondrial ribosomal protein L42##CR749344|MRPL42|28977|mitochondrial ribosomal protein L42##NM_003348|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC000396|UBE2N|7334|ubiquitin-conjugating enzyme E2N##NM_003877|SOCS2|8835|suppressor of cytokine signaling 2##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2	0.998299	CTCF.p2:-18:0.998
chr16	1979792	1979925	reg1005575.p1	13.673	+	NM_001009606	-11628	-	TSC_hg19_v1_chr16_-_1922166 NM_001163560	-57689	-	TSC_hg19_v1_chr16_-_1922086 NM_152764	-57768	-	BC003127 TSC_hg19_v1_chr16_-_1993197	13336	-	TSC_hg19_v1_chr16_-_1993216 AF187272 AF166124 AF161388 AK026128	13379	-	TSC_hg19_v1_chr16_-_1993267 NM_016332	13422	-	NM_001009606|HS3ST6|64711|heparan sulfate (glucosamine) 3-O-sulfotransferase 6##NM_001163560|C16orf73|254528|chromosome 16 open reading frame 73##NM_152764|C16orf73|254528|chromosome 16 open reading frame 73##BC003127|SEPX1|51734|selenoprotein X, 1##AF187272|SEPX1|51734|selenoprotein X, 1##AF166124|SEPX1|51734|selenoprotein X, 1##AF161388|SEPX1|51734|selenoprotein X, 1##AK026128|SEPX1|51734|selenoprotein X, 1##NM_016332|SEPX1|51734|selenoprotein X, 1	0.998665	CTCF.p2:13:0.999
chrX	20085407	20085544	reg1004994.p1	13.672	+	AY092822 TSC_hg19_v1_chrX_-_20009180	-76367	-	NM_198279	-97094	-	TSC_hg19_v1_chrX_-_19905675 AK313308 AF230904 AY423734 NM_031892	-179771	-	AK294788 NM_001168467	49277	-	AK027409 TSC_hg19_v1_chrX_-_20135017 AK303019 AK316117 AK296319 BC136379 BC089400 NM_001168465 NM_001168466 NM_152780	49589	-	BT007064 EU831819 EU831896 TSC_hg19_v1_chrX_-_20159957 BC000793 BC110421 AK312320 BC067851 L18960 NM_001412	74401	-	AY092822|LOC729609|729609|uncharacterized LOC729609##NM_198279|CXorf23|256643|chromosome X open reading frame 23##AK313308|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF230904|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY423734|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_031892|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK294788|MAP7D2|256714|MAP7 domain containing 2##NM_001168467|MAP7D2|256714|MAP7 domain containing 2##AK027409|MAP7D2|256714|MAP7 domain containing 2##AK303019|MAP7D2|256714|MAP7 domain containing 2##AK316117|MAP7D2|256714|MAP7 domain containing 2##AK296319|MAP7D2|256714|MAP7 domain containing 2##BC136379|MAP7D2|256714|MAP7 domain containing 2##BC089400|MAP7D2|256714|MAP7 domain containing 2##NM_001168465|MAP7D2|256714|MAP7 domain containing 2##NM_001168466|MAP7D2|256714|MAP7 domain containing 2##NM_152780|MAP7D2|256714|MAP7 domain containing 2##BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	0.441435	CTCF.p2:11:0.441
chr10	48398540	48398675	reg1006222.p1	13.670	+	J03912 CU691778 BC039844 AB593121 M22453 NM_002900 DQ426897	-7672	-	TSC_hg19_v1_chr10_+_48355056 AK056666 BC051323 NM_153034 BC026895	-43556	+	AK298761 NM_001040084 BC073755 AK096715 Z36830 AK296976 BC004376 NM_001098845 X16662 BC029890 AK300158 AK223149 AK296573 AK300139 M81844 AB590156 CU687256 DQ893430 DQ896775	-143282	+	EU446620 EU446952 BC074921 BC069643 TSC_hg19_v1_chr10_-_48416877 AF188285 NM_016204 AK314956	18179	-	D49492 AK315322 AK310360 BC028237 NM_004962 TSC_hg19_v1_chr10_-_48439183	40472	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	408316	-	J03912|RBP3|5949|retinol binding protein 3, interstitial##BC039844|RBP3|5949|retinol binding protein 3, interstitial##AB593121|RBP3|5949|retinol binding protein 3, interstitial##M22453|RBP3|5949|retinol binding protein 3, interstitial##NM_002900|RBP3|5949|retinol binding protein 3, interstitial##AK056666|ZNF488|118738|zinc finger protein 488##BC051323|ZNF488|118738|zinc finger protein 488##NM_153034|ZNF488|118738|zinc finger protein 488##BC026895|ZNF488|118738|zinc finger protein 488##AK298761|ANXA8|653145|annexin A8##NM_001040084|ANXA8|653145|annexin A8##BC073755|ANXA8|653145|annexin A8##Z36830|ANXA8|653145|annexin A8##BC004376|ANXA8|653145|annexin A8##NM_001098845|ANXA8L1|728113|annexin A8-like 1##X16662|ANXA8L2|244|annexin A8-like 2##AK300158|ANXA8|653145|annexin A8##AK223149|ANXA8L2|244|annexin A8-like 2##AK296573|ANXA8|653145|annexin A8##AK300139|ANXA8|653145|annexin A8##M81844|ANXA8|653145|annexin A8##DQ893430|ANXA8L2|244|annexin A8-like 2##DQ896775|ANXA8|653145|annexin A8##EU446620|GDF2|2658|growth differentiation factor 2##EU446952|GDF2|2658|growth differentiation factor 2##BC074921|GDF2|2658|growth differentiation factor 2##BC069643|GDF2|2658|growth differentiation factor 2##AF188285|GDF2|2658|growth differentiation factor 2##NM_016204|GDF2|2658|growth differentiation factor 2##AK314956|GDF2|2658|growth differentiation factor 2##D49492|GDF10|2662|growth differentiation factor 10##AK315322|GDF10|2662|growth differentiation factor 10##AK310360|GDF10|2662|growth differentiation factor 10##BC028237|GDF10|2662|growth differentiation factor 10##NM_004962|GDF10|2662|growth differentiation factor 10##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A	0.975281	CTCF.p2:-3:0.975
chr2	20611316	20611431	reg1005021.p1	13.670	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-60954	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-84240	-	AF272350 TSC_hg19_v1_chr2_-_20512079	-99324	-	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	35459	+	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	239475	-	AF522369 NM_182828	255050	+	AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)##AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7	0.015305	
chr22	26794757	26794874	reg1004968.p1	13.670	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	-229152	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	-229318	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	-229378	+	TSC_hg19_v1_chr22_+_26825246 NM_020437 BC036753 AK315112	30509	+	AK097886 BC035614 AK054717 AL365512 NM_152841	80648	-	TSC_hg19_v1_chr22_-_26879750 AK057648 AK290211	84927	-	CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4##BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4##AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4##AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4##NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4##AK057648|HPS4|89781|Hermansky-Pudlak syndrome 4##AK290211|HPS4|89781|Hermansky-Pudlak syndrome 4	0.957794	CTCF.p2:-4:0.958
chr2	80553484	80553632	reg1004281.p1	13.670	+	TSC_hg19_v1_chr2_-_80531838 AK225779	-21715	-	TSC_hg19_v1_chr2_-_80531719 AK290512	-21833	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	-22033	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	4132812	-	AK296741 TSC_hg19_v1_chr2_-_84686396	4132837	-	NM_003849	4133027	-	AK225779|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit	0.893043	CTCF.p2:-31:0.893
chr16	53088817	53088948	reg1002515.p1	13.667	+	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	-1	+	AK299202 NM_001146188	-507169	-	NM_001080430	-508077	-	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	44217	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	76178	+	NM_001207030	316158	-	AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_001207030|LOC643802|643802|u3 small nucleolar ribonucleoprotein protein MPP10-like	0.972749	CTCF.p2:-3:0.973
chr3	49486632	49486782	reg1005548.p1	13.667	+	TSC_hg19_v1_chr3_-_49466744 AK313073 NM_032316 AK301846	-19955	-	TSC_hg19_v1_chr3_-_49466731 BC005050 AK094248 AF538150 AJ299740 BC050653	-20004	-	NM_000481 NM_001164710 NM_001164711 NM_001164712 TSC_hg19_v1_chr3_-_49460121	-26591	-	TSC_hg19_v1_chr3_+_49506079 NM_001177643	19400	+	TSC_hg19_v1_chr3_+_49507721 NM_001165928 NM_001177634 NM_001177635 NM_001177636 NM_001177637 NM_001177638 NM_001177639 NM_001177640 NM_001177641 NM_001177642 NM_001177644 NM_004393 L19711 BC012740 BC014616 AK291692	21084	+	TSC_hg19_v1_chr3_+_49547870 DQ893491 DQ896435	61210	+	AK313073|NICN1|84276|nicolin 1##NM_032316|NICN1|84276|nicolin 1##AK301846|NICN1|84276|nicolin 1##BC005050|NICN1|84276|nicolin 1##AK094248|NICN1|84276|nicolin 1##AF538150|NICN1|84276|nicolin 1##AJ299740|NICN1|84276|nicolin 1##BC050653|NICN1|84276|nicolin 1##NM_000481|AMT|275|aminomethyltransferase##NM_001164710|AMT|275|aminomethyltransferase##NM_001164711|AMT|275|aminomethyltransferase##NM_001164712|AMT|275|aminomethyltransferase##NM_001177643|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001165928|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177634|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177635|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177636|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177637|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177638|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177639|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177640|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177641|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177642|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177644|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_004393|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##L19711|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##BC012740|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##BC014616|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##AK291692|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##DQ893491|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##DQ896435|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)	0.99935	CTCF.p2:15:0.999
chr4	7072606	7072725	reg1004777.p1	13.667	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-2864	-	AF298592 DQ891523 DQ894713 TSC_hg19_v1_chr4_-_7069792 AK098475 AK301695 AK312882 BC024242 NM_025196	-2888	-	TSC_hg19_v1_chr4_+_7045222 AK093974 AX748390 AB590997	-27401	+	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	121730	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	363991	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	868723	-	AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AF298592|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ891523|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ894713|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK098475|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK301695|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK312882|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##BC024242|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##NM_025196|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK093974|TADA2B|93624|transcriptional adaptor 2B##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1	1.007022	CTCF.p2:9:0.987
chr1	18629441	18629577	reg1003448.p2	13.664	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	-195232	+	AK057339 NM_030812 BC028909 U20582	-547663	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	-684644	+	NM_152375	177914	+	NM_001135254 NM_002584 NM_013945 X96743	327990	+	NM_152232 AB527225	556646	-	AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_152375|KLHDC7A|127707|kelch domain containing 7A##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2	0.98279	CTCF.p2:-4:0.983
chr6	52528542	52528683	reg1003833.p2	13.664	+	AK095117 TSC_hg19_v1_chr6_+_52442225	-86438	+	TSC_hg19_v1_chr6_-_52441859 AK291751 AB621814 BC028121 NM_012288	-86761	-	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	-86854	-	TSC_hg19_v1_chr6_+_52529228 AK091117	616	+	TSC_hg19_v1_chr6_+_52535913 NM_014051 AF239771 AK312063 BC015097 BC019328	7311	+	AK292602 AK313601 M16594 BC002895 NM_000846	99704	-	AK095117|FLJ37798|401264|uncharacterized LOC401264##AK291751|TRAM2|9697|translocation associated membrane protein 2##BC028121|TRAM2|9697|translocation associated membrane protein 2##NM_012288|TRAM2|9697|translocation associated membrane protein 2##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2##AK091117|LOC730101|730101|uncharacterized LOC730101##NM_014051|TMEM14A|28978|transmembrane protein 14A##AF239771|TMEM14A|28978|transmembrane protein 14A##AK312063|TMEM14A|28978|transmembrane protein 14A##BC015097|TMEM14A|28978|transmembrane protein 14A##BC019328|TMEM14A|28978|transmembrane protein 14A##AK292602|GSTA2|2939|glutathione S-transferase alpha 2##AK313601|GSTA2|2939|glutathione S-transferase alpha 2##M16594|GSTA2|2939|glutathione S-transferase alpha 2##BC002895|GSTA2|2939|glutathione S-transferase alpha 2##NM_000846|GSTA2|2939|glutathione S-transferase alpha 2	0.946548	CTCF.p2:20:0.947
chr19	35130539	35130647	reg1004331.p1	13.662	+	BC093909 BC093935 NM_001025591	-45104	-	TSC_hg19_v1_chr19_+_34972869 NM_001080436	-157721	+	TSC_hg19_v1_chr19_+_34919329 DQ893423 EU176757 CU678406 AF110957 BT009781 CR456756	-211252	+	TSC_hg19_v1_chr19_+_35168582 AL834318 NM_001012320 NM_018443 AK074901 AF155656 AK315241 AF190157 AK297551 AK131278 BC024176 AF265236 AF326206	38056	+	TSC_hg19_v1_chr19_+_35225102 BC043228	94505	+	TSC_hg19_v1_chr19_+_35225150 AK295492	94563	+	BC093909|SCGBL|284402|secretoglobin-like##BC093935|SCGBL|284402|secretoglobin-like##NM_001025591|SCGBL|284402|secretoglobin-like##NM_001080436|WTIP|126374|Wilms tumor 1 interacting protein##DQ893423|UBA2|10054|ubiquitin-like modifier activating enzyme 2##EU176757|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AF110957|UBA2|10054|ubiquitin-like modifier activating enzyme 2##BT009781|UBA2|10054|ubiquitin-like modifier activating enzyme 2##CR456756|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AL834318|ZNF302|55900|zinc finger protein 302##NM_001012320|ZNF302|55900|zinc finger protein 302##NM_018443|ZNF302|55900|zinc finger protein 302##AK074901|ZNF302|55900|zinc finger protein 302##AF155656|ZNF302|55900|zinc finger protein 302##AK315241|ZNF302|55900|zinc finger protein 302##AF190157|ZNF302|55900|zinc finger protein 302##AK131278|ZNF302|55900|zinc finger protein 302##BC024176|ZNF302|55900|zinc finger protein 302##AF265236|ZNF302|55900|zinc finger protein 302##AF326206|ZNF302|55900|zinc finger protein 302##BC043228|ZNF181|339318|zinc finger protein 181##AK295492|ZNF181|339318|zinc finger protein 181	0.861842	CTCF.p2:-7:0.862
chr5	139536827	139536950	reg1003319.p2	13.662	+	BC041380 NM_001007189	-31369	+	TSC_hg19_v1_chr5_+_139493703 M96684 NM_005859 BC110574 BC110594 BC036087 AB464679 BT019388	-43161	+	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	-114043	-	TSC_hg19_v1_chr5_+_139554672 NM_032412	17766	+	TSC_hg19_v1_chr5_+_139554722 BC023982 BC013643 AK225992 AK311640 AK312045 AJ245877	17883	+	AB464063 TSC_hg19_v1_chr5_-_139682672	145776	-	BC041380|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##NM_001007189|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##M96684|PURA|5813|purine-rich element binding protein A##NM_005859|PURA|5813|purine-rich element binding protein A##BC110574|PURA|5813|purine-rich element binding protein A##BC110594|PURA|5813|purine-rich element binding protein A##BC036087|PURA|5813|purine-rich element binding protein A##BT019388|PURA|5813|purine-rich element binding protein A##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2##NM_032412|C5orf32|84418|chromosome 5 open reading frame 32##BC023982|C5orf32|84418|chromosome 5 open reading frame 32##BC013643|C5orf32|84418|chromosome 5 open reading frame 32##AK225992|C5orf32|84418|chromosome 5 open reading frame 32##AK312045|C5orf32|84418|chromosome 5 open reading frame 32##AJ245877|C5orf32|84418|chromosome 5 open reading frame 32	0.994793	CTCF.p2:5:0.995
chr7	55347783	55347906	reg1004752.p1	13.662	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-260898	+	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	-261099	+	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	-520923	-	AK095857 NM_018697	85296	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	85728	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	292196	-	AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor##AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	0.986969	CTCF.p2:-27:0.987
chr1	27179713	27179815	reg1003646.p1	13.661	+	TSC_hg19_v1_chr1_+_27153178 BC066776 NM_032283	-26567	+	AK000484 AK225521 AK301626 NM_001202554 AK056539	-65083	+	TSC_hg19_v1_chr1_+_27114455 NM_017837 BC013568	-65308	+	BC023552 AF029082 NM_006142 TSC_hg19_v1_chr1_+_27189639 BC001550 BC000329 BC002995 BC000995 AB464718 M93010 DQ894162 CU674492 CR541905 CR541926	9901	+	CU675813 AY364261 TSC_hg19_v1_chr1_-_27216757 BC007815 BC008634 BC020272	36911	-	TSC_hg19_v1_chr1_-_27216775 AK022535 AY358864	37008	-	BC066776|ZDHHC18|84243|zinc finger, DHHC-type containing 18##NM_032283|ZDHHC18|84243|zinc finger, DHHC-type containing 18##AK000484|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK225521|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK301626|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_001202554|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK056539|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_017837|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##BC013568|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##BC023552|SFN|2810|stratifin##AF029082|SFN|2810|stratifin##NM_006142|SFN|2810|stratifin##BC001550|SFN|2810|stratifin##BC000329|SFN|2810|stratifin##BC002995|SFN|2810|stratifin##BC000995|SFN|2810|stratifin##M93010|SFN|2810|stratifin##DQ894162|SFN|2810|stratifin##CR541905|SFN|2810|stratifin##CR541926|SFN|2810|stratifin##AY364261|GPN2|54707|GPN-loop GTPase 2##BC007815|GPN2|54707|GPN-loop GTPase 2##BC008634|GPN2|54707|GPN-loop GTPase 2##BC020272|GPN2|54707|GPN-loop GTPase 2##AK022535|GPN2|54707|GPN-loop GTPase 2##AY358864|GPN2|54707|GPN-loop GTPase 2	0.99801	CTCF.p2:0:0.998
chr12	91372090	91372210	reg1005168.p1	13.661	+	BC026075 BC024183 BC027600 BC034491 NM_152638	-23199	-	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-1268605	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-1269463	+	U59111 TSC_hg19_v1_chr12_-_91398750	26597	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	26629	-	NM_007035	79980	-	BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan##NM_007035|KERA|11081|keratocan	0.830993	CTCF.p2:-12:0.831
chr19	14185999	14186139	reg1005584.p1	13.661	+	NM_001145028	-16099	-	TSC_hg19_v1_chr19_+_14142622 BC028003 DQ891051 DQ894230 CU688366	-43422	+	AF265242 AY358876 TSC_hg19_v1_chr19_+_14142572	-43484	+	TSC_hg19_v1_chr19_-_14201272 AY453840 NM_138352	15207	-	TSC_hg19_v1_chr19_-_14224999 AF208004 AF224718 NM_207518 AK292284 AF239744	38985	-	AB528630 X07767 TSC_hg19_v1_chr19_-_14228549 BC039846 BC108259 NM_002730	42391	-	NM_001145028|PALM3|342979|paralemmin 3##BC028003|IL27RA|9466|interleukin 27 receptor, alpha##DQ891051|IL27RA|9466|interleukin 27 receptor, alpha##DQ894230|IL27RA|9466|interleukin 27 receptor, alpha##AF265242|IL27RA|9466|interleukin 27 receptor, alpha##AY358876|IL27RA|9466|interleukin 27 receptor, alpha##AY453840|SAMD1|90378|sterile alpha motif domain containing 1##NM_138352|SAMD1|90378|sterile alpha motif domain containing 1##AF208004|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF224718|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##NM_207518|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AK292284|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF239744|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##X07767|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##BC039846|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##BC108259|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##NM_002730|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha	0.997041	CTCF.p2:-3:0.997
chr4	154671464	154671615	reg1005127.p1	13.661	+	TSC_hg19_v1_chr4_+_154605441 BC033756	-66075	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	-66109	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	-66141	+	CU689874 TSC_hg19_v1_chr4_-_154681121	9532	-	TSC_hg19_v1_chr4_-_154681150 AK091509 AX747029	9617	-	BC034385 NM_173662	9847	-	BC033756|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##AF424049|TLR2|7097|toll-like receptor 2##AK091509|RNF175|285533|ring finger protein 175##BC034385|RNF175|285533|ring finger protein 175##NM_173662|RNF175|285533|ring finger protein 175	0.999537	CTCF.p2:23:1.000
chr12	127593284	127593395	reg1003729.p1	13.660	+	NM_052907	-1782178	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-2043271	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-2043398	+	NM_001136103	1158608	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	1715104	-	BC043528 TSC_hg19_v1_chr12_+_129337985	1744645	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.998197	CTCF.p2:-3:0.998
chr13	96486559	96486677	reg1004757.p1	13.660	+	TSC_hg19_v1_chr13_+_96329409 BC047936 BC020215 BC033823 AB384852 CU690538	-157160	+	TSC_hg19_v1_chr13_+_96329401 AK312861	-157217	+	AK292947 NM_006260 TSC_hg19_v1_chr13_+_96329392	-157224	+	CU688350 TSC_hg19_v1_chr13_-_96705666 BC125233 BC125234 AF227906 BC017759 BC067807 BC111021 AK001735 BC032302 NM_020121	219032	-	AF539426 NM_153456	256474	+	AK122639 NM_080818 AK313684	1159994	-	BC047936|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##BC033823|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##AK312861|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##AK292947|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##NM_006260|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##BC125233|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC125234|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF227906|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC017759|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC067807|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC111021|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AK001735|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC032302|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##NM_020121|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##AK122639|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##NM_080818|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AK313684|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1	0.999662	CTCF.p2:8:1.000
chr1	9935062	9935184	reg1003828.p1	13.660	+	AF438482 NM_001009566 NM_014944 AB020718	-50557	-	TSC_hg19_v1_chr1_-_9884024 BC033902	-51079	-	TSC_hg19_v1_chr1_-_9884023 AK304813	-51102	-	TSC_hg19_v1_chr1_-_9970314 AB021262 BC035794 BC014300 NM_001012329 NM_020248	35186	-	BC063443 NM_032368	67702	-	TSC_hg19_v1_chr1_-_10003358 AB060688 BC007240 AK304348 AK312550	68250	-	AF438482|CLSTN1|22883|calsyntenin 1##NM_001009566|CLSTN1|22883|calsyntenin 1##NM_014944|CLSTN1|22883|calsyntenin 1##AB020718|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1##AB021262|CTNNBIP1|56998|catenin, beta interacting protein 1##BC014300|CTNNBIP1|56998|catenin, beta interacting protein 1##NM_001012329|CTNNBIP1|56998|catenin, beta interacting protein 1##NM_020248|CTNNBIP1|56998|catenin, beta interacting protein 1##BC063443|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##NM_032368|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AB060688|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##BC007240|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK304348|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK312550|LZIC|84328|leucine zipper and CTNNBIP1 domain containing	0.993583	CTCF.p2:-16:0.994
chr4	171296072	171296196	reg1003831.p1	13.660	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-284720	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-284936	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-348629	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	1438510	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	2793818	+	BC043556 TSC_hg19_v1_chr4_-_174090314	2794176	-	BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.500403	CTCF.p2:17:0.487
chr20	52816274	52816420	reg1003690.p1	13.659	+	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	-25827	-	AK315220 NM_003657	-129044	-	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	-129285	-	TSC_hg19_v1_chr20_+_52824396 NM_002623	8100	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	8290	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	275867	+	L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##NM_002623|PFDN4|5203|prefoldin subunit 4##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5	0.986892	CTCF.p2:21:0.987
chr6	119097827	119097957	reg1002002.p1	13.659	+	BC110835 BC064835 NM_001178035	-66659	-	BC048977 BC052778 NM_001042475 NM_206921 BC036553	-124856	-	NM_002667 M63603 AK311799 BC005269	-228427	+	NM_014034 AK025738 AL050261 BC010878 AB028628 AF279306 CU679835 CR457347	117516	+	DQ892465 DQ895678 NM_017696	155002	-	TSC_hg19_v1_chr6_-_119256163 AK122665	158281	-	BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##DQ892465|MCM9|254394|minichromosome maintenance complex component 9##DQ895678|MCM9|254394|minichromosome maintenance complex component 9##NM_017696|MCM9|254394|minichromosome maintenance complex component 9##AK122665|MCM9|254394|minichromosome maintenance complex component 9	0.995085	CTCF.p2:0:0.995
chr9	123698908	123699041	reg1005038.p1	13.659	+	TSC_hg19_v1_chr9_-_123691445 NM_001190945 AK315476	-7514	-	AK090468 NM_005658	-9802	-	AB590501 BT019408 CU692854 TSC_hg19_v1_chr9_-_123688443 U19261 BC024145	-10571	-	M57729 BC113738 BC113740 AK310774 AK310780 BC022299 NM_001735	113570	-	TSC_hg19_v1_chr9_+_123837236 AK307387 BC089415	138288	+	TSC_hg19_v1_chr9_-_123837410 AB209031	138456	-	NM_001190945|TRAF1|7185|TNF receptor-associated factor 1##AK315476|TRAF1|7185|TNF receptor-associated factor 1##AK090468|TRAF1|7185|TNF receptor-associated factor 1##NM_005658|TRAF1|7185|TNF receptor-associated factor 1##BT019408|TRAF1|7185|TNF receptor-associated factor 1##U19261|TRAF1|7185|TNF receptor-associated factor 1##BC024145|TRAF1|7185|TNF receptor-associated factor 1##M57729|C5|727|complement component 5##BC113738|C5|727|complement component 5##BC113740|C5|727|complement component 5##AK310774|C5|727|complement component 5##AK310780|C5|727|complement component 5##BC022299|C5|727|complement component 5##NM_001735|C5|727|complement component 5##AK307387|CNTRL|11064|centriolin##BC089415|CNTRL|11064|centriolin##AB209031|C5|727|complement component 5	0.988368	CTCF.p2:2:0.988
chr1	210580701	210580829	reg1003462.p1	13.658	+	NM_001170580 BC051191	-78124	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	-78500	+	NM_001122834 NM_001170564 AK297193	-79169	+	AF078741 AF078742 BC113709 BC143599 TSC_hg19_v1_chr1_-_211307437 AJ001366 NM_002238 NM_172362	726620	-	TSC_hg19_v1_chr1_+_211432710 NM_001136223 NM_001136224 NM_001136225	851943	+	TSC_hg19_v1_chr1_+_211432726 AK131312	851962	+	NM_001170580|HHAT|55733|hedgehog acyltransferase##BC051191|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase##NM_001122834|HHAT|55733|hedgehog acyltransferase##NM_001170564|HHAT|55733|hedgehog acyltransferase##AK297193|HHAT|55733|hedgehog acyltransferase##AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_001136223|RCOR3|55758|REST corepressor 3##NM_001136224|RCOR3|55758|REST corepressor 3##NM_001136225|RCOR3|55758|REST corepressor 3##AK131312|RCOR3|55758|REST corepressor 3	0.998944	CTCF.p2:-17:0.999
chr8	94973300	94973402	reg1002492.p1	13.658	+	NM_001161778 AB590483 TSC_hg19_v1_chr8_+_94930074 AK302651	-43316	+	NM_018444 TSC_hg19_v1_chr8_+_94929171 BC047619 NM_001161780 AK057079 NM_001161779 BC064978 AF155661 NM_001161781	-44171	+	AK308071 NM_001142301 NM_153704 AK092244 AX747428 TSC_hg19_v1_chr8_+_94767121 AK308735 BX648768 BC031220 BC017974 BC054338 AK094935 BC032835	-206237	+	U07969 BC112013 BC113464 TSC_hg19_v1_chr8_-_95220784 X83228 AK301001 NM_004063	247443	-	AK312873 NM_001144663	256179	-	U10550 TSC_hg19_v1_chr8_-_95274525	301171	-	NM_001161778|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK302651|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_018444|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC047619|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161780|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK057079|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161779|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC064978|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AF155661|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161781|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK308071|TMEM67|91147|transmembrane protein 67##NM_001142301|TMEM67|91147|transmembrane protein 67##NM_153704|TMEM67|91147|transmembrane protein 67##AK092244|TMEM67|91147|transmembrane protein 67##AK308735|TMEM67|91147|transmembrane protein 67##BX648768|TMEM67|91147|transmembrane protein 67##BC031220|TMEM67|91147|transmembrane protein 67##BC017974|TMEM67|91147|transmembrane protein 67##BC054338|TMEM67|91147|transmembrane protein 67##AK094935|TMEM67|91147|transmembrane protein 67##BC032835|TMEM67|91147|transmembrane protein 67##U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle	0.047165	
chr11	103553161	103553264	reg1003390.p1	13.656	+	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	-573013	+	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	-590289	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	-590471	-	NM_001001711 AF429971 AK093336 AX748060 BC022018 BC022017 BC021710 BC021172	354126	+	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	481582	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	481828	-	AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_001001711|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AF429971|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK093336|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022018|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022017|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021710|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021172|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D	0.562014	CTCF.p2:-3:0.562
chr15	38288054	38288171	reg1004619.p1	13.656	+	BC029221 NM_152453	-60656	+	TSC_hg19_v1_chr15_-_37393466 BC050431 NM_001220482 NM_002399 BC001516 BC001844 BC007202 AK300247	-894670	-	TSC_hg19_v1_chr15_-_37392751 AK056216 NM_170674 NM_170675 NM_170676 NM_170677	-895556	-	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	256283	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	256910	+	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	458233	+	BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##BC050431|MEIS2|4212|Meis homeobox 2##NM_001220482|MEIS2|4212|Meis homeobox 2##NM_002399|MEIS2|4212|Meis homeobox 2##BC001516|MEIS2|4212|Meis homeobox 2##BC001844|MEIS2|4212|Meis homeobox 2##BC007202|MEIS2|4212|Meis homeobox 2##AK300247|MEIS2|4212|Meis homeobox 2##AK056216|MEIS2|4212|Meis homeobox 2##NM_170674|MEIS2|4212|Meis homeobox 2##NM_170675|MEIS2|4212|Meis homeobox 2##NM_170676|MEIS2|4212|Meis homeobox 2##NM_170677|MEIS2|4212|Meis homeobox 2##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B	0.044808	
chr8	68934511	68934640	reg1004623.p1	13.656	+	AK294299 TSC_hg19_v1_chr8_+_68864738	-69845	+	TSC_hg19_v1_chr8_+_68864614 AY570973	-69942	+	TSC_hg19_v1_chr8_+_68864598 AY508996 AY508997 NM_024870 NM_025170	-69980	+	BC041961 NM_001195639 NM_052958	308381	+	AK095341 NM_001128204 NM_015170 TSC_hg19_v1_chr8_+_70378858 AF545571	1444290	+	TSC_hg19_v1_chr8_+_70379077 AK307951	1444505	+	AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY508996|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY508997|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##NM_024870|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##NM_025170|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##BC041961|C8orf34|116328|chromosome 8 open reading frame 34##NM_001195639|C8orf34|116328|chromosome 8 open reading frame 34##NM_052958|C8orf34|116328|chromosome 8 open reading frame 34##AK095341|SULF1|23213|sulfatase 1##NM_001128204|SULF1|23213|sulfatase 1##NM_015170|SULF1|23213|sulfatase 1##AF545571|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1	0.913035	CTCF.p2:1:0.913
chr15	90418340	90418458	reg1004545.p1	13.655	+	TSC_hg19_v1_chr15_-_90358085 AB209918 NM_001150 AK298242	-60327	-	AB462940 X13276 TSC_hg19_v1_chr15_-_90349860 BC058928 M22324	-68523	-	AK298339 TSC_hg19_v1_chr15_-_90347590	-70829	-	TSC_hg19_v1_chr15_-_90437227 DQ892982 DQ896230 BC002785 AL110108 BC007773 AK222698 AK294712 X99459 BC010020 AK312467	18818	-	NM_005829	19217	-	AK093274 AX748027 CU691000 TSC_hg19_v1_chr15_-_90456145 AK000495 BC053602 NM_001199058 NM_182616	37706	-	AB209918|ANPEP|290|alanyl (membrane) aminopeptidase##NM_001150|ANPEP|290|alanyl (membrane) aminopeptidase##AK298242|ANPEP|290|alanyl (membrane) aminopeptidase##X13276|ANPEP|290|alanyl (membrane) aminopeptidase##BC058928|ANPEP|290|alanyl (membrane) aminopeptidase##M22324|ANPEP|290|alanyl (membrane) aminopeptidase##AK298339|ANPEP|290|alanyl (membrane) aminopeptidase##DQ892982|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ896230|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC002785|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AL110108|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC007773|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK222698|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK294712|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##X99459|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC010020|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK312467|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##NM_005829|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK093274|C15orf38|348110|chromosome 15 open reading frame 38##AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##BC053602|C15orf38|348110|chromosome 15 open reading frame 38##NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##NM_182616|C15orf38|348110|chromosome 15 open reading frame 38	0.888311	CTCF.p2:-3:0.888
chr19	3618653	3618795	reg1005538.p1	13.655	+	TSC_hg19_v1_chr19_-_3606860 BC028027 NM_001060 NM_201636	-11869	-	U27325 TSC_hg19_v1_chr19_-_3606618 U11271	-12113	-	TSC_hg19_v1_chr19_-_3600582 AY429110 BC121148 BC121149 BC074749 BC074750	-18101	-	TSC_hg19_v1_chr19_-_3626774 AK299963	8057	-	TSC_hg19_v1_chr19_-_3626795 AY917150 NM_001080543 NM_021231	8077	-	BC004149 TSC_hg19_v1_chr19_-_3632587	13792	-	BC028027|TBXA2R|6915|thromboxane A2 receptor##NM_001060|TBXA2R|6915|thromboxane A2 receptor##NM_201636|TBXA2R|6915|thromboxane A2 receptor##U27325|TBXA2R|6915|thromboxane A2 receptor##U11271|TBXA2R|6915|thromboxane A2 receptor##AY429110|TBXA2R|6915|thromboxane A2 receptor##BC121148|TBXA2R|6915|thromboxane A2 receptor##BC121149|TBXA2R|6915|thromboxane A2 receptor##BC074749|TBXA2R|6915|thromboxane A2 receptor##BC074750|TBXA2R|6915|thromboxane A2 receptor##AK299963|C19orf29|58509|chromosome 19 open reading frame 29##AY917150|C19orf29|58509|chromosome 19 open reading frame 29##NM_001080543|C19orf29|58509|chromosome 19 open reading frame 29##NM_021231|C19orf29|58509|chromosome 19 open reading frame 29##BC004149|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma	1.335609	CTCF.p2:2:1.000	CTCF.p2:54:0.336
chr5	32613304	32613431	reg1004809.p1	13.654	+	NM_006713 TSC_hg19_v1_chr5_+_32585676 AK294124 AK311754 BC022339 AK307268 BC009610 BC018189 BC071655 BC063402 BC010537 BC105972 AB209285	-27711	+	TSC_hg19_v1_chr5_-_32444845 AK292214 AK309638 BC017879 NM_016107	-168431	-	TSC_hg19_v1_chr5_-_32444820 BC107417 AJ314790 BC030540 BC137084 BC137085	-168589	-	NM_001204376 AK300094 AK308301	97383	+	AK290870 NM_000908 NM_001204375 M59305	98121	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	98438	+	NM_006713|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK294124|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK311754|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC022339|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK307268|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC009610|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC018189|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC071655|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC063402|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC010537|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC105972|SUB1|10923|SUB1 homolog (S. cerevisiae)##AB209285|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK292214|ZFR|51663|zinc finger RNA binding protein##AK309638|ZFR|51663|zinc finger RNA binding protein##BC017879|ZFR|51663|zinc finger RNA binding protein##NM_016107|ZFR|51663|zinc finger RNA binding protein##BC107417|ZFR|51663|zinc finger RNA binding protein##AJ314790|ZFR|51663|zinc finger RNA binding protein##BC030540|ZFR|51663|zinc finger RNA binding protein##BC137084|ZFR|51663|zinc finger RNA binding protein##BC137085|ZFR|51663|zinc finger RNA binding protein##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)	0.995707	CTCF.p2:10:0.996
chr16	84545072	84545196	reg1004501.p1	13.653	+	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	-6843	-	TSC_hg19_v1_chr16_+_84402143 AK300526 AY791884 BX648333 NM_014861 AK316128 CR749829	-142992	+	AF302109 NM_021197 AF169631 TSC_hg19_v1_chr16_+_84328440 AK075061 BC029159 DQ893365 DQ896682	-216646	+	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	106442	-	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	106526	-	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	137000	+	BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##AK300526|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AY791884|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BX648333|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##NM_014861|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AK316128|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##CR749829|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AF302109|WFDC1|58189|WAP four-disulfide core domain 1##NM_021197|WFDC1|58189|WAP four-disulfide core domain 1##AF169631|WFDC1|58189|WAP four-disulfide core domain 1##AK075061|WFDC1|58189|WAP four-disulfide core domain 1##BC029159|WFDC1|58189|WAP four-disulfide core domain 1##DQ893365|WFDC1|58189|WAP four-disulfide core domain 1##DQ896682|WFDC1|58189|WAP four-disulfide core domain 1##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)	0.999701	CTCF.p2:-6:1.000
chr20	62169384	62169509	reg1003757.p1	13.653	+	TSC_hg19_v1_chr20_-_62168681 AB527573 X78549 AK301691 AK315232 BC035843 NM_005975 AK301364	-742	-	TSC_hg19_v1_chr20_+_62152117 BC002531 NM_024299 AK024699 AK311318	-17313	+	TSC_hg19_v1_chr20_-_62130437 X70940 AK307536 NM_001958 BC110409	-38933	-	AB527384 NM_080823	9389	-	BC000912 NM_024059	14926	+	AB051556 BC150283 NM_033405	29660	-	X78549|PTK6|5753|PTK6 protein tyrosine kinase 6##AK301691|PTK6|5753|PTK6 protein tyrosine kinase 6##AK315232|PTK6|5753|PTK6 protein tyrosine kinase 6##BC035843|PTK6|5753|PTK6 protein tyrosine kinase 6##NM_005975|PTK6|5753|PTK6 protein tyrosine kinase 6##AK301364|PTK6|5753|PTK6 protein tyrosine kinase 6##BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##X70940|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##AK307536|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##NM_001958|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC110409|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##NM_080823|SRMS|6725|src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites##BC000912|C20orf195|79025|chromosome 20 open reading frame 195##NM_024059|C20orf195|79025|chromosome 20 open reading frame 195##AB051556|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC150283|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##NM_033405|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285	0.897638	CTCF.p2:-9:0.845
chr4	113525871	113525994	reg1003899.p1	13.653	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	-88600	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	-307405	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	-318931	-	TSC_hg19_v1_chr4_-_113558057 BC044799 BC028584 AK002193	32114	-	NM_016648	32187	+	TSC_hg19_v1_chr4_-_113558120 AK302613 AK299831 NM_018392	32203	-	BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC044799|C4orf21|55345|chromosome 4 open reading frame 21##BC028584|C4orf21|55345|chromosome 4 open reading frame 21##AK002193|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7##AK302613|C4orf21|55345|chromosome 4 open reading frame 21##AK299831|C4orf21|55345|chromosome 4 open reading frame 21##NM_018392|C4orf21|55345|chromosome 4 open reading frame 21	0.968682	CTCF.p2:16:0.969
chr17	43275278	43275410	reg1005199.p1	13.652	+	AK056946 NM_144608	-37081	+	TSC_hg19_v1_chr17_+_43225936 BC006460	-49409	+	TSC_hg19_v1_chr17_+_43225841 AK023624 AB021179	-49493	+	TSC_hg19_v1_chr17_+_43299284 AY278319 NM_005892 BC111564	24016	+	AK096807 TSC_hg19_v1_chr17_-_43319268	43852	-	TSC_hg19_v1_chr17_+_43325300 AK311429	49960	+	AK056946|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##NM_144608|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##BC006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK023624|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AB021179|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AY278319|FMNL1|752|formin-like 1##NM_005892|FMNL1|752|formin-like 1##BC111564|FMNL1|752|formin-like 1##AK311429|LOC100133991|100133991|uncharacterized LOC100133991	0.343286	CTCF.p2:-1:0.343
chr9	135978689	135978823	reg1005398.p1	13.652	+	NM_001807 S79774 M85201 BC042510 AK299965	-41381	+	TSC_hg19_v1_chr9_+_135906386 AK000194 AK097295 AK293980 BC006409 AY007123 DQ892071 DQ895265 AJ420443 BC030157	-72368	+	NM_001122823 NM_012087 TSC_hg19_v1_chr9_+_135906094 AK225761 AK311481 AK055092 AF133124 BC011355 BC017337	-72657	+	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	17743	-	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	45930	-	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	60541	-	NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_001122823|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_012087|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK225761|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK311481|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK055092|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF133124|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC011355|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC017337|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1	0.997829	CTCF.p2:-14:0.998
chr19	18279093	18279206	reg1001927.p1	13.651	+	TSC_hg19_v1_chr19_+_18264004 BC070082 NM_005027 BC090249	-15117	+	BC063240 TSC_hg19_v1_chr19_+_18263972	-15168	+	TSC_hg19_v1_chr19_+_18208608 AB527184 NM_015016 AB011133	-70540	+	NM_006332 TSC_hg19_v1_chr19_+_18284600 AB049659 AK291551	5442	+	TSC_hg19_v1_chr19_+_18284622 BC021136 BC031020 AF097362	5472	+	TSC_hg19_v1_chr19_+_18284633 AB590284 CU676848 CU689078 DQ884410 DQ892016 DQ895206	5492	+	BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_015016|MAST3|23031|microtubule associated serine/threonine kinase 3##AB011133|MAST3|23031|microtubule associated serine/threonine kinase 3##NM_006332|IFI30|10437|interferon, gamma-inducible protein 30##AB049659|IFI30|10437|interferon, gamma-inducible protein 30##AK291551|IFI30|10437|interferon, gamma-inducible protein 30##BC021136|IFI30|10437|interferon, gamma-inducible protein 30##BC031020|IFI30|10437|interferon, gamma-inducible protein 30##DQ884410|IFI30|10437|interferon, gamma-inducible protein 30##DQ892016|IFI30|10437|interferon, gamma-inducible protein 30##DQ895206|IFI30|10437|interferon, gamma-inducible protein 30	0.998176	CTCF.p2:5:0.998
chr20	42320713	42320844	reg1005328.p1	13.650	+	TSC_hg19_v1_chr20_+_42295753 AK303249 AK314791 BC053555 X13293 AB528519 AK223482 DQ893522 DQ895945	-24943	+	NM_002466 TSC_hg19_v1_chr20_+_42295720 BC007585	-25057	+	TSC_hg19_v1_chr20_+_42219576 NM_016004 BC021086 BC039831 AK301915 AF151811 AK001436	-101166	+	BC040049 AK058060 NM_001008901 NM_176791	34825	-	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	222709	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	224015	+	AK303249|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK314791|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC053555|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##X13293|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK223482|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ893522|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ895945|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_002466|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC007585|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_016004|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##BC039831|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##AK301915|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##AF151811|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##AK001436|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##BC040049|GTSF1L|149699|gametocyte specific factor 1-like##AK058060|GTSF1L|149699|gametocyte specific factor 1-like##NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like##NM_176791|GTSF1L|149699|gametocyte specific factor 1-like##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2	0.997991	CTCF.p2:13:0.998
chr3	186868547	186868657	reg1004190.p1	13.650	+	TSC_hg19_v1_chr3_-_186857285 L05096 AB063610 BC012328 NM_052969	-11346	-	AK292879 BC040009 NM_003032 X62822 BC031476 L11720 X54363	-128930	+	U67847 TSC_hg19_v1_chr3_+_186714361	-154254	+	BC065202 NM_153708 BC034744 DQ890807 DQ893962 AY562235	46740	+	BC106945 BC106946 TSC_hg19_v1_chr3_-_187009489 AK291686 AK129893 AK304334 AK300663 BX647237 AK291157 CR749615 BC039724 NM_001031849 NM_001879 NM_139125	141037	-	BC013161 NM_022147 AJ251832 AY562238 DQ891046 DQ894225	217596	+	L05096|RPL39L|116832|ribosomal protein L39-like##AB063610|RPL39L|116832|ribosomal protein L39-like##BC012328|RPL39L|116832|ribosomal protein L39-like##NM_052969|RPL39L|116832|ribosomal protein L39-like##AK292879|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC040009|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_003032|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X62822|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC031476|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##L11720|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X54363|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1##NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1##BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1##AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1##BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC013161|RTP4|64108|receptor (chemosensory) transporter protein 4##NM_022147|RTP4|64108|receptor (chemosensory) transporter protein 4##AJ251832|RTP4|64108|receptor (chemosensory) transporter protein 4##AY562238|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ891046|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ894225|RTP4|64108|receptor (chemosensory) transporter protein 4	0.869245	CTCF.p2:-3:0.869
chr17	159247	159412	reg1002462.p1	13.649	+	TSC_hg19_v1_chr17_-_31442 NM_003585 D70830	-127818	-	TSC_hg19_v1_chr17_-_31242 AB590049	-128073	-	None	None	None	NM_001242780 AK054983 BC027928	21692	+	TSC_hg19_v1_chr17_-_202589 AK000469 AK291950	43251	-	TSC_hg19_v1_chr17_-_202619 NM_001190411 NM_001190412 NM_001190413 NM_006987	43295	-	NM_003585|DOC2B|8447|double C2-like domains, beta##D70830|DOC2B|8447|double C2-like domains, beta##NM_001242780|LOC100506388|100506388|uncharacterized LOC100506388##AK054983|LOC100506388|100506388|uncharacterized LOC100506388##BC027928|LOC100506388|100506388|uncharacterized LOC100506388##AK000469|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AK291950|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190411|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190412|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190413|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_006987|RPH3AL|9501|rabphilin 3A-like (without C2 domains)	0.0	
chr19	11671482	11671640	reg1005171.p1	13.648	+	TSC_hg19_v1_chr19_-_11670046 AK097850 NM_032377	-1528	-	BC022015 NM_001299 AK316406 BC036307 D17408 U37019 TSC_hg19_v1_chr19_+_11649667 AK223234 AK301888 AK313255 S80560 CU692454	-21902	+	BC005119 BC000193 AK131241 TSC_hg19_v1_chr19_-_11639952 BC008279 NM_001142464 NM_001142465 NM_016581	-31604	-	X14618 TSC_hg19_v1_chr19_-_11688461	16890	-	TSC_hg19_v1_chr19_-_11688497 BC025414 J04430	16929	-	TSC_hg19_v1_chr19_-_11688516 AK290717 NM_001611	16969	-	AK097850|ELOF1|84337|elongation factor 1 homolog (S. cerevisiae)##NM_032377|ELOF1|84337|elongation factor 1 homolog (S. cerevisiae)##BC022015|CNN1|1264|calponin 1, basic, smooth muscle##NM_001299|CNN1|1264|calponin 1, basic, smooth muscle##AK316406|CNN1|1264|calponin 1, basic, smooth muscle##BC036307|CNN1|1264|calponin 1, basic, smooth muscle##D17408|CNN1|1264|calponin 1, basic, smooth muscle##U37019|CNN1|1264|calponin 1, basic, smooth muscle##AK223234|CNN1|1264|calponin 1, basic, smooth muscle##AK301888|CNN1|1264|calponin 1, basic, smooth muscle##AK313255|CNN1|1264|calponin 1, basic, smooth muscle##S80560|CNN1|1264|calponin 1, basic, smooth muscle##BC005119|ECSIT|51295|ECSIT homolog (Drosophila)##BC000193|ECSIT|51295|ECSIT homolog (Drosophila)##BC008279|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001142464|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001142465|ECSIT|51295|ECSIT homolog (Drosophila)##NM_016581|ECSIT|51295|ECSIT homolog (Drosophila)##X14618|ACP5|54|acid phosphatase 5, tartrate resistant##BC025414|ACP5|54|acid phosphatase 5, tartrate resistant##J04430|ACP5|54|acid phosphatase 5, tartrate resistant##AK290717|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001611|ACP5|54|acid phosphatase 5, tartrate resistant	0.964663	CTCF.p2:-22:0.794
chr3	50226856	50226967	reg1004134.p1	13.648	+	BC042914 NM_004186 U33920	-34005	+	TSC_hg19_v1_chr3_+_50192514 AB209259	-34414	+	TSC_hg19_v1_chr3_+_50126425 U23946	-100476	+	DQ426874 NM_000172 NM_144499 X15088 BC095505 AF493908	2179	+	TSC_hg19_v1_chr3_+_50242705 NM_006841 AK299677 BX537382 AK293801 AK313461 BC042875 U49082 AF244548	15795	+	TSC_hg19_v1_chr3_+_50273632 BC012138	46692	+	BC042914|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##NM_004186|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##U33920|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##AB209259|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##U23946|RBM5|10181|RNA binding motif protein 5##NM_000172|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##NM_144499|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##X15088|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##BC095505|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##AF493908|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##NM_006841|SLC38A3|10991|solute carrier family 38, member 3##AK299677|SLC38A3|10991|solute carrier family 38, member 3##BX537382|SLC38A3|10991|solute carrier family 38, member 3##AK293801|SLC38A3|10991|solute carrier family 38, member 3##AK313461|SLC38A3|10991|solute carrier family 38, member 3##BC042875|SLC38A3|10991|solute carrier family 38, member 3##U49082|SLC38A3|10991|solute carrier family 38, member 3##AF244548|SLC38A3|10991|solute carrier family 38, member 3##BC012138|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	0.958974	CTCF.p2:8:0.959
chr5	121851977	121852091	reg1003736.p1	13.648	+	BC029465 TSC_hg19_v1_chr5_-_121814783	-37251	-	TSC_hg19_v1_chr5_+_121647890 DQ227317 NM_001242935 NM_005460 BC094759 BC040552 AK304646 AK310835 AF076929 BC033743	-204176	+	AK299687 TSC_hg19_v1_chr5_+_121647434	-204622	+	TSC_hg19_v1_chr5_+_122110737 AK023716 NM_003100	258710	+	AK023581 TSC_hg19_v1_chr5_+_122110776 BC003382 AF065482 AK222968	258735	+	TSC_hg19_v1_chr5_+_122110786 AY272044 AK002170 AB464236 BT009841 DQ890933 DQ894096 AF043453	258778	+	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein##NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein##NM_005460|SNCAIP|9627|synuclein, alpha interacting protein##BC094759|SNCAIP|9627|synuclein, alpha interacting protein##BC040552|SNCAIP|9627|synuclein, alpha interacting protein##AK304646|SNCAIP|9627|synuclein, alpha interacting protein##AK310835|SNCAIP|9627|synuclein, alpha interacting protein##AF076929|SNCAIP|9627|synuclein, alpha interacting protein##BC033743|SNCAIP|9627|synuclein, alpha interacting protein##AK299687|SNCAIP|9627|synuclein, alpha interacting protein##AK023716|SNX2|6643|sorting nexin 2##NM_003100|SNX2|6643|sorting nexin 2##AK023581|SNX2|6643|sorting nexin 2##BC003382|SNX2|6643|sorting nexin 2##AF065482|SNX2|6643|sorting nexin 2##AK222968|SNX2|6643|sorting nexin 2##AY272044|SNX2|6643|sorting nexin 2##AK002170|SNX2|6643|sorting nexin 2##BT009841|SNX2|6643|sorting nexin 2##DQ890933|SNX2|6643|sorting nexin 2##DQ894096|SNX2|6643|sorting nexin 2##AF043453|SNX2|6643|sorting nexin 2	0.435612	CTCF.p2:-17:0.436
chr3	79081977	79082109	reg1005098.p1	13.646	+	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-13456	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-415058	-	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-1992763	+	NM_002941	735015	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	2728654	-	TSC_hg19_v1_chr3_-_81810798 AK312245	2728755	-	NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.998161	CTCF.p2:14:0.998
chr7	44627822	44627960	reg1005344.p1	13.645	+	TSC_hg19_v1_chr7_-_44621839 AK290125	-6053	-	TSC_hg19_v1_chr7_-_44621821 AK294122 BC052641 BC053583 NM_182547 AK074557 BC057851	-6064	-	TSC_hg19_v1_chr7_-_44621814 AY191223 AB590072 BC025705 AM393201 AM393715 BX647965 BC035467	-6091	-	NM_001003941 NM_001165036 NM_002541 TSC_hg19_v1_chr7_+_44646167	18252	+	TSC_hg19_v1_chr7_+_44646177 AK296400	18282	+	TSC_hg19_v1_chr7_+_44646188 BC009580	18293	+	AK290125|TMED4|222068|transmembrane emp24 protein transport domain containing 4##AK294122|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BC052641|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BC053583|TMED4|222068|transmembrane emp24 protein transport domain containing 4##NM_182547|TMED4|222068|transmembrane emp24 protein transport domain containing 4##AK074557|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BC057851|TMED4|222068|transmembrane emp24 protein transport domain containing 4##AY191223|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BC025705|TMED4|222068|transmembrane emp24 protein transport domain containing 4##AM393201|TMED4|222068|transmembrane emp24 protein transport domain containing 4##AM393715|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BX647965|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BC035467|TMED4|222068|transmembrane emp24 protein transport domain containing 4##NM_001003941|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##NM_001165036|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##NM_002541|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##AK296400|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC009580|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)	0.26915	CTCF.p2:-11:0.269
chr18	57504875	57505028	reg1004840.p1	13.643	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-140301	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	-140360	-	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	-478465	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	62278	+	AK314130 NM_005912	535049	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1652823	+	NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2	0.99843	CTCF.p2:-14:0.998
chr8	215879	215982	reg1003952.p2	13.643	+	NM_173539 AK093442 AX748129 TSC_hg19_v1_chr8_+_182396 AK313454 NM_001042415 NM_001042416 BC026190	-33588	+	AK127000 TSC_hg19_v1_chr8_-_182246 BC064938 BC052779	-33658	-	NM_001005504	-98907	-	AF419858 NM_012173 NM_183420 NM_183421 TSC_hg19_v1_chr8_+_356923	140935	+	TSC_hg19_v1_chr8_+_356957 BC050393	141054	+	TSC_hg19_v1_chr8_-_494835 AY194292 FJ381685 BC136248 BC136249	278985	-	NM_173539|ZNF596|169270|zinc finger protein 596##AK313454|ZNF596|169270|zinc finger protein 596##NM_001042415|ZNF596|169270|zinc finger protein 596##NM_001042416|ZNF596|169270|zinc finger protein 596##BC026190|ZNF596|169270|zinc finger protein 596##AK127000|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC064938|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC052779|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21##AF419858|FBXO25|26260|F-box protein 25##NM_012173|FBXO25|26260|F-box protein 25##NM_183420|FBXO25|26260|F-box protein 25##NM_183421|FBXO25|26260|F-box protein 25##BC050393|FBXO25|26260|F-box protein 25##AY194292|C8orf42|157695|chromosome 8 open reading frame 42##BC136248|C8orf42|157695|chromosome 8 open reading frame 42##BC136249|C8orf42|157695|chromosome 8 open reading frame 42	0.941903	CTCF.p2:1:0.942
chr16	4635551	4635681	reg1004203.p1	13.642	+	NM_001145011	-29126	+	TSC_hg19_v1_chr16_-_4588775 BC002882 AK292036 AK302297 AL136698 AK294257 DQ167023 NM_001199055 NM_001199056 NM_013399 AK307067 AK308532	-46824	-	TSC_hg19_v1_chr16_-_4588442 AF195661 AL833853 NM_001199054	-47179	-	TSC_hg19_v1_chr16_-_4664870 CU687554 AF370434 BC012018 AK055785 BC025327 BC008681	29218	-	TSC_hg19_v1_chr16_-_4664901 BC062534 NM_145253	29317	-	BC040160 TSC_hg19_v1_chr16_-_4665044	29412	-	NM_001145011|C16orf96|342346|chromosome 16 open reading frame 96##BC002882|C16orf5|29965|chromosome 16 open reading frame 5##AK292036|C16orf5|29965|chromosome 16 open reading frame 5##AK302297|C16orf5|29965|chromosome 16 open reading frame 5##AL136698|C16orf5|29965|chromosome 16 open reading frame 5##AK294257|C16orf5|29965|chromosome 16 open reading frame 5##DQ167023|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199055|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199056|C16orf5|29965|chromosome 16 open reading frame 5##NM_013399|C16orf5|29965|chromosome 16 open reading frame 5##AK307067|C16orf5|29965|chromosome 16 open reading frame 5##AK308532|C16orf5|29965|chromosome 16 open reading frame 5##AF195661|C16orf5|29965|chromosome 16 open reading frame 5##AL833853|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199054|C16orf5|29965|chromosome 16 open reading frame 5##AF370434|FAM100A|124402|family with sequence similarity 100, member A##BC012018|FAM100A|124402|family with sequence similarity 100, member A##AK055785|FAM100A|124402|family with sequence similarity 100, member A##BC025327|FAM100A|124402|family with sequence similarity 100, member A##BC008681|FAM100A|124402|family with sequence similarity 100, member A##BC062534|FAM100A|124402|family with sequence similarity 100, member A##NM_145253|FAM100A|124402|family with sequence similarity 100, member A##BC040160|FAM100A|124402|family with sequence similarity 100, member A	0.997467	CTCF.p2:10:0.997
chr17	4785395	4785532	reg1005636.p1	13.642	+	TSC_hg19_v1_chr17_+_4736660 NM_001024937 NM_015716 NM_153827 NM_170663 BC034673 AB209450 AB041926 BC094686 DQ891158 DQ894339 AB035698 AY775058	-48718	+	NM_001243108 NM_002663 TSC_hg19_v1_chr17_+_4710443 BC015033 AK304246 AK314797 BC056871	-75017	+	TSC_hg19_v1_chr17_+_4699478 AK311768 D29012 AB464088 BT009809 CR457065 DQ891216 DQ894399	-85982	+	AK309386 AK128415 NM_001145536	17443	+	NM_000080 X66403	20905	-	BC027955 NM_000173 J02940	50144	+	NM_001024937|MINK1|50488|misshapen-like kinase 1##NM_015716|MINK1|50488|misshapen-like kinase 1##NM_153827|MINK1|50488|misshapen-like kinase 1##NM_170663|MINK1|50488|misshapen-like kinase 1##BC034673|MINK1|50488|misshapen-like kinase 1##AB209450|MINK1|50488|misshapen-like kinase 1##AB041926|MINK1|50488|misshapen-like kinase 1##BC094686|MINK1|50488|misshapen-like kinase 1##DQ891158|MINK1|50488|misshapen-like kinase 1##DQ894339|MINK1|50488|misshapen-like kinase 1##AB035698|MINK1|50488|misshapen-like kinase 1##AY775058|MINK1|50488|misshapen-like kinase 1##NM_001243108|PLD2|5338|phospholipase D2##NM_002663|PLD2|5338|phospholipase D2##BC015033|PLD2|5338|phospholipase D2##AK304246|PLD2|5338|phospholipase D2##AK314797|PLD2|5338|phospholipase D2##BC056871|PLD2|5338|phospholipase D2##AK311768|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##D29012|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##BT009809|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##CR457065|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##DQ891216|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##DQ894399|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##AK309386|C17orf107|100130311|chromosome 17 open reading frame 107##AK128415|C17orf107|100130311|chromosome 17 open reading frame 107##NM_001145536|C17orf107|100130311|chromosome 17 open reading frame 107##NM_000080|CHRNE|1145|cholinergic receptor, nicotinic, epsilon##X66403|CHRNE|1145|cholinergic receptor, nicotinic, epsilon##BC027955|GP1BA|2811|glycoprotein Ib (platelet), alpha polypeptide##NM_000173|GP1BA|2811|glycoprotein Ib (platelet), alpha polypeptide##J02940|GP1BA|2811|glycoprotein Ib (platelet), alpha polypeptide	0.990905	CTCF.p2:4:0.991
chr2	132431652	132431784	reg1004567.p1	13.642	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-146212	+	AK304811 TSC_hg19_v1_chr2_+_132250648 AK293811 AK300337 AK303293 AK308371 BC093080	-181133	+	TSC_hg19_v1_chr2_-_132250072 NM_001085365	-181657	-	AF038169 NM_013310	48345	+	BC043584 NM_214461	127515	-	AK122643 NM_001508	742428	+	BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK304811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK293811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK300337|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK303293|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK308371|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC093080|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39	0.141857	
chr10	112039262	112039383	reg1003290.p2	13.641	+	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-53501	+	BC012907 NM_001008541	-69334	+	TSC_hg19_v1_chr10_+_111967381 BC035128 NM_130439	-71963	+	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	25271	-	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	25378	-	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	218429	+	AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##BC012907|MXI1|4601|MAX interactor 1##NM_001008541|MXI1|4601|MAX interactor 1##BC035128|MXI1|4601|MAX interactor 1##NM_130439|MXI1|4601|MAX interactor 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5	0.999144	CTCF.p2:2:0.999
chr6	99600067	99600192	reg1005858.p1	13.641	+	TSC_hg19_v1_chr6_-_99395817 AK313076 BC055010 BC039819 NM_012160	-204302	-	TSC_hg19_v1_chr6_-_99395800 BC091484 BC032641	-204340	-	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	-317457	+	BC004869 BC011583 NM_032511	197401	-	AF193016 BC015634 BC001534 BC063463 CU687730 AB590714 AF351615 AK056955 AL136726 NM_017421	241924	-	AF314185 TSC_hg19_v1_chr6_-_99849313 AL080186	249162	-	AK313076|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC055010|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC039819|FBXL4|26235|F-box and leucine-rich repeat protein 4##NM_012160|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC091484|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC032641|FBXL4|26235|F-box and leucine-rich repeat protein 4##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2##BC004869|C6orf168|84553|chromosome 6 open reading frame 168##BC011583|C6orf168|84553|chromosome 6 open reading frame 168##NM_032511|C6orf168|84553|chromosome 6 open reading frame 168##AF193016|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC015634|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC001534|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC063463|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AF351615|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AK056955|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AL136726|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##NM_017421|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AF314185|PNISR|25957|PNN-interacting serine/arginine-rich protein##AL080186|PNISR|25957|PNN-interacting serine/arginine-rich protein	0.959647	CTCF.p2:-4:0.960
chr15	85743574	85743697	reg1005619.p1	13.640	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-77317	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-218309	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-218398	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	180256	+	AF127481 NM_144767	476632	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	594462	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	1.760569	CTCF.p2:-13:0.999	CTCF.p2:-106:0.762
chr10	89495109	89495248	reg1005229.p1	13.638	+	TSC_hg19_v1_chr10_+_89419623 NM_001015880 NM_004670 BC009894 AK312556 AF091242 AF150754 AF074331 AF173365 DQ893625 DQ895430 AF313907	-75633	+	AK309176 NM_001178118	-227589	+	NM_001178117 NM_004897 TSC_hg19_v1_chr10_+_89264649 AK304624 AK312937 AL050356 AF084943 AB209819 AF084944 AY358938 BC032504 AF046914 CU689404	-230703	+	TSC_hg19_v1_chr10_-_89577921 AK075223 NM_032810	82724	-	EU552092 NM_001126049	128015	-	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	128048	+	NM_001015880|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##NM_004670|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##BC009894|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK312556|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF091242|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF150754|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF074331|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF173365|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ893625|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ895430|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF313907|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK309176|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178118|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178117|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_004897|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK304624|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK312937|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AL050356|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF084943|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AB209819|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF084944|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AY358938|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##BC032504|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF046914|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK075223|ATAD1|84896|ATPase family, AAA domain containing 1##NM_032810|ATAD1|84896|ATPase family, AAA domain containing 1##EU552092|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_001126049|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog	0.0	
chr15	81262477	81262612	reg1004967.p1	13.638	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	-190823	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	-274535	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	-274882	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	19656	-	TSC_hg19_v1_chr15_+_81293344 NM_022566	30800	+	AK302120 BC062471 NM_173528 AK307565	164083	+	AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##NM_022566|MESDC1|59274|mesoderm development candidate 1##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26	0.998886	CTCF.p2:27:0.999
chr3	33414457	33414591	reg1005270.p1	13.638	+	TSC_hg19_v1_chr3_+_33318965 AK001271 NM_012157 AK302218 NM_001171713 AK303764 AK299665 AK294209 AF174589 AK316229 AK001438 AK298967 AK297534 AF186273 BC031556	-95574	+	AB011099 NM_015551	-153818	-	TSC_hg19_v1_chr3_+_33155562 AJ006470 CU679079 DQ893221 DQ896550	-258951	+	AK023274 AF198487 TSC_hg19_v1_chr3_-_33481564	67012	-	TSC_hg19_v1_chr3_-_33481868 BC047235 NM_001128160 NM_014517	67341	-	TSC_hg19_v1_chr3_-_33481898 AK293100 NM_001128161	67376	-	AK001271|FBXL2|25827|F-box and leucine-rich repeat protein 2##NM_012157|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK302218|FBXL2|25827|F-box and leucine-rich repeat protein 2##NM_001171713|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK303764|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK299665|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK294209|FBXL2|25827|F-box and leucine-rich repeat protein 2##AF174589|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK316229|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK001438|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK298967|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK297534|FBXL2|25827|F-box and leucine-rich repeat protein 2##AF186273|FBXL2|25827|F-box and leucine-rich repeat protein 2##BC031556|FBXL2|25827|F-box and leucine-rich repeat protein 2##AB011099|SUSD5|26032|sushi domain containing 5##NM_015551|SUSD5|26032|sushi domain containing 5##AJ006470|CRTAP|10491|cartilage associated protein##DQ893221|CRTAP|10491|cartilage associated protein##DQ896550|CRTAP|10491|cartilage associated protein##AK023274|UBP1|7342|upstream binding protein 1 (LBP-1a)##AF198487|UBP1|7342|upstream binding protein 1 (LBP-1a)##BC047235|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_001128160|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_014517|UBP1|7342|upstream binding protein 1 (LBP-1a)##AK293100|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_001128161|UBP1|7342|upstream binding protein 1 (LBP-1a)	0.671681	CTCF.p2:7:0.672
chr19	48201458	48201589	reg1004295.p1	13.637	+	TSC_hg19_v1_chr19_+_48111441 BC032065 NM_015711	-90079	+	NM_001101419	-142411	-	TSC_hg19_v1_chr19_-_48018321 BC028234 AK098401 NM_003827	-183108	-	NM_014601 TSC_hg19_v1_chr19_+_48216678 AK315548 AK074701 AK097126 AK097228 AK296907 AK298067 BC014445	15127	+	NM_015710 TSC_hg19_v1_chr19_+_48248797	47271	+	TSC_hg19_v1_chr19_+_48248802 AK303180 AK297877 AK303918 AK309788 AK301117 AF182076 BC006311 BC013203 AY535000 CU679611 DQ892724 DQ895973 AK024486 BC013235 BC013307 BC014009 BC039869 BC007248 BC004229 AF296124 AL359336 AL359335	47312	+	BC032065|GLTSCR1|29998|glioma tumor suppressor candidate region gene 1##NM_015711|GLTSCR1|29998|glioma tumor suppressor candidate region gene 1##NM_001101419|ZNF541|84215|zinc finger protein 541##BC028234|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##AK098401|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##NM_003827|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##NM_014601|EHD2|30846|EH-domain containing 2##AK315548|EHD2|30846|EH-domain containing 2##AK074701|EHD2|30846|EH-domain containing 2##AK097126|EHD2|30846|EH-domain containing 2##AK097228|EHD2|30846|EH-domain containing 2##AK296907|EHD2|30846|EH-domain containing 2##AK298067|EHD2|30846|EH-domain containing 2##BC014445|EHD2|30846|EH-domain containing 2##NM_015710|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK297877|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK303918|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK309788|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK301117|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF182076|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC006311|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013203|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AY535000|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ892724|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ895973|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK024486|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013235|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013307|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC014009|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC039869|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC007248|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC004229|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF296124|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359336|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359335|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2	0.347553	CTCF.p2:27:0.335
chr4	140572883	140572988	reg1003611.p2	13.637	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-95502	-	AL136904 NM_031296	-197975	+	TSC_hg19_v1_chr4_-_140374867 AK097885	-198061	-	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	14055	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	14199	+	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	501403	-	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AL136904|RAB33B|83452|RAB33B, member RAS oncogene family##NM_031296|RAB33B|83452|RAB33B, member RAS oncogene family##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)	0.994854	CTCF.p2:2:0.995
chr15	93574012	93574140	reg1005173.p1	13.635	+	AK295909 TSC_hg19_v1_chr15_+_93447798	-126316	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	-130496	+	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	-130590	+	AL390083 TSC_hg19_v1_chr15_-_93616347	42252	-	TSC_hg19_v1_chr15_-_93616364 AK074966 BC015886 NM_001166286	42297	-	AK309814 AK125204 NM_001166288 NM_001166289	42838	-	AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##AL390083|RGMA|56963|RGM domain family, member A##AK074966|RGMA|56963|RGM domain family, member A##BC015886|RGMA|56963|RGM domain family, member A##NM_001166286|RGMA|56963|RGM domain family, member A##AK309814|RGMA|56963|RGM domain family, member A##AK125204|RGMA|56963|RGM domain family, member A##NM_001166288|RGMA|56963|RGM domain family, member A##NM_001166289|RGMA|56963|RGM domain family, member A	0.989258	CTCF.p2:-13:0.989
chr16	3109363	3109483	reg1004049.p2	13.635	+	BC026114 BC045731 TSC_hg19_v1_chr16_-_3109353	-66	-	AJ272137 NM_022468 AJ239053 AB042328 AF145442 AF185270	-12636	+	BC128602 NM_001103175	-23882	-	BC009401 NM_001012631 NM_001012633 NM_001012718 NM_004221 AY495331 AY495332 AY495333 AK307158 TSC_hg19_v1_chr16_+_3115358 FJ985780	5923	+	NM_001012635 TSC_hg19_v1_chr16_+_3115631	6198	+	NM_001012634 TSC_hg19_v1_chr16_+_3115638	6215	+	BC026114|LOC100507419|100507419|uncharacterized LOC100507419##BC045731|LOC100507419|100507419|uncharacterized LOC100507419##AJ272137|MMP25|64386|matrix metallopeptidase 25##NM_022468|MMP25|64386|matrix metallopeptidase 25##AJ239053|MMP25|64386|matrix metallopeptidase 25##AB042328|MMP25|64386|matrix metallopeptidase 25##AF145442|MMP25|64386|matrix metallopeptidase 25##AF185270|MMP25|64386|matrix metallopeptidase 25##BC128602|CCDC64B|146439|coiled-coil domain containing 64B##NM_001103175|CCDC64B|146439|coiled-coil domain containing 64B##BC009401|IL32|9235|interleukin 32##NM_001012631|IL32|9235|interleukin 32##NM_001012633|IL32|9235|interleukin 32##NM_001012718|IL32|9235|interleukin 32##NM_004221|IL32|9235|interleukin 32##AY495331|IL32|9235|interleukin 32##AY495332|IL32|9235|interleukin 32##AY495333|IL32|9235|interleukin 32##AK307158|IL32|9235|interleukin 32##FJ985780|IL32|9235|interleukin 32##NM_001012635|IL32|9235|interleukin 32##NM_001012634|IL32|9235|interleukin 32	0.996775	CTCF.p2:-13:0.997
chr8	10786070	10786184	reg1003814.p1	13.635	+	TSC_hg19_v1_chr8_-_10697386 AF205718 AF418553 AJ344104	-88718	-	AY238941 AY523566 BC093762 BC143382 NM_017884 TSC_hg19_v1_chr8_-_10697379 AY029161 AK313715 BC015479 AK296724	-88793	-	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	-198143	-	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	272738	-	TSC_hg19_v1_chr8_+_11141999 BC034990 NM_015458	355885	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	356228	+	AF205718|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF418553|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ344104|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY238941|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY523566|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC093762|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC143382|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##NM_017884|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AK313715|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC015479|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7##AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##BC034990|MTMR9|66036|myotubularin related protein 9##NM_015458|MTMR9|66036|myotubularin related protein 9##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9	0.963715	CTCF.p2:-7:0.743	CTCF.p2:66:0.221
chrX	117941488	117941607	reg1004762.p1	13.635	+	TSC_hg19_v1_chrX_+_117861562 BC015768 NM_001560 Y10659 U81379 U81380 AK313467 Y09328 BC009960 AB528371 DQ893454 DQ896296 AB209849	-79980	+	AY692226 NM_144658 TSC_hg19_v1_chrX_+_117629874	-311675	+	TSC_hg19_v1_chrX_+_117526665 AL834210	-414860	+	TSC_hg19_v1_chrX_+_117957786 AK122676 BC036572 BC031241 BC057841 NM_173798 BC018066	16275	+	TSC_hg19_v1_chrX_+_118108580 AK091777 AK290198 AX747177	167033	+	TSC_hg19_v1_chrX_+_118108607 BC098283 BC099847 BC100671 BC103491 NM_001031855 NM_024778	167106	+	BC015768|IL13RA1|3597|interleukin 13 receptor, alpha 1##NM_001560|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y10659|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81379|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81380|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK313467|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y09328|IL13RA1|3597|interleukin 13 receptor, alpha 1##BC009960|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ893454|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ896296|IL13RA1|3597|interleukin 13 receptor, alpha 1##AB209849|IL13RA1|3597|interleukin 13 receptor, alpha 1##AY692226|DOCK11|139818|dedicator of cytokinesis 11##NM_144658|DOCK11|139818|dedicator of cytokinesis 11##AL834210|WDR44|54521|WD repeat domain 44##AK122676|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC036572|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC031241|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC057841|ZCCHC12|170261|zinc finger, CCHC domain containing 12##NM_173798|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC018066|ZCCHC12|170261|zinc finger, CCHC domain containing 12##AK091777|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK290198|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC098283|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC099847|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC100671|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC103491|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_001031855|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_024778|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3	0.946727	CTCF.p2:6:0.947
chr4	167087123	167087259	reg1004756.p1	13.634	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-292737	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-787034	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-838336	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	1068420	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	1068513	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	1068549	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.327532	CTCF.p2:-23:0.328
chr4	6976249	6976376	reg1003455.p2	13.633	+	TSC_hg19_v1_chr4_+_6911552 BC041167	-64746	+	TSC_hg19_v1_chr4_+_6911497 NM_020773	-64836	+	TSC_hg19_v1_chr4_-_6911379 BC032036	-64907	-	BC042376 TSC_hg19_v1_chr4_-_6988764 BC035129	12454	-	NM_001113363 TSC_hg19_v1_chr4_+_6988958	12641	+	HQ258308 AK075056 TSC_hg19_v1_chr4_-_7044729 BC105055 BC112274 NM_153376	68391	-	BC041167|TBC1D14|57533|TBC1 domain family, member 14##NM_020773|TBC1D14|57533|TBC1 domain family, member 14##BC042376|LOC100134937|100134937|uncharacterized LOC100134937##BC035129|LOC100134937|100134937|uncharacterized LOC100134937##NM_001113363|TBC1D14|57533|TBC1 domain family, member 14##HQ258308|CCDC96|257236|coiled-coil domain containing 96##AK075056|CCDC96|257236|coiled-coil domain containing 96##BC105055|CCDC96|257236|coiled-coil domain containing 96##BC112274|CCDC96|257236|coiled-coil domain containing 96##NM_153376|CCDC96|257236|coiled-coil domain containing 96	0.555615	CTCF.p2:-11:0.556
chr16	84655846	84655992	reg1005312.p1	13.632	+	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	-4259	-	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	-4343	-	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	-117628	-	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	26215	+	NM_005153 TSC_hg19_v1_chr16_+_84733587 BC000263	77655	+	TSC_hg19_v1_chr16_+_84733603 AK315570 CR749515	77681	+	L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)##NM_005153|USP10|9100|ubiquitin specific peptidase 10##BC000263|USP10|9100|ubiquitin specific peptidase 10##AK315570|USP10|9100|ubiquitin specific peptidase 10##CR749515|USP10|9100|ubiquitin specific peptidase 10	0.962348	CTCF.p2:9:0.962
chr19	2579534	2579671	reg1004562.p1	13.632	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-103364	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-122642	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-122666	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	123093	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	123140	-	AK124445 TSC_hg19_v1_chr19_-_2717420	137747	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.582855	CTCF.p2:14:0.583
chr1	97991217	97991352	reg1004933.p1	13.632	+	BC030757 TSC_hg19_v1_chr1_+_97260652	-730701	+	NM_021190 TSC_hg19_v1_chr1_+_97187343 AK092216 AB051232 AK299755 AK299922 AB209266 AF530580 AF530581 AF176085 AK299897 BC016582 AB051233	-804000	+	AB055763 TSC_hg19_v1_chr1_-_97145197	-846088	-	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	395205	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	395275	-	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	395322	-	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2##AK092216|PTBP2|58155|polypyrimidine tract binding protein 2##AB051232|PTBP2|58155|polypyrimidine tract binding protein 2##AK299755|PTBP2|58155|polypyrimidine tract binding protein 2##AK299922|PTBP2|58155|polypyrimidine tract binding protein 2##AB209266|PTBP2|58155|polypyrimidine tract binding protein 2##AF530580|PTBP2|58155|polypyrimidine tract binding protein 2##AF530581|PTBP2|58155|polypyrimidine tract binding protein 2##AF176085|PTBP2|58155|polypyrimidine tract binding protein 2##AK299897|PTBP2|58155|polypyrimidine tract binding protein 2##BC016582|PTBP2|58155|polypyrimidine tract binding protein 2##AB051233|PTBP2|58155|polypyrimidine tract binding protein 2##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase	0.37068	CTCF.p2:-3:0.371
chr10	102827734	102827857	reg1004853.p1	13.630	+	TSC_hg19_v1_chr10_+_102821745 BC007758 AY359087 AK225949 AK172862	-6136	+	TSC_hg19_v1_chr10_+_102820998 AK172864 NM_030929	-6817	+	TSC_hg19_v1_chr10_+_102792167 AK299405 BC000124	-35606	+	BC019674 NM_001085398	63107	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	63383	+	BC136321 BC069156 NM_006562 X90828	160907	-	BC007758|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AY359087|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK225949|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172862|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172864|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##NM_030929|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK299405|SFXN3|81855|sideroflexin 3##BC000124|SFXN3|81855|sideroflexin 3##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1	0.996723	CTCF.p2:-3:0.997
chr9	117167969	117168098	reg1005358.p1	13.630	+	AY703039 AK126136 TSC_hg19_v1_chr9_-_117160753	-7282	-	AY703040 BC055285 NM_030767	-11349	-	AY703041 AY703042 AK131082 AK160382 TSC_hg19_v1_chr9_-_117150263 AB075848	-17743	-	AL110228 NM_001083885	97440	-	BC142684 TSC_hg19_v1_chr9_-_117267731 AK056190 BC142614 NM_001173425 NM_015404	99697	-	NM_004888 TSC_hg19_v1_chr9_+_117350048 BC003564 AF038954 BC008452	182005	+	AY703039|AKNA|80709|AT-hook transcription factor##AK126136|AKNA|80709|AT-hook transcription factor##AY703040|AKNA|80709|AT-hook transcription factor##BC055285|AKNA|80709|AT-hook transcription factor##NM_030767|AKNA|80709|AT-hook transcription factor##AY703041|AKNA|80709|AT-hook transcription factor##AY703042|AKNA|80709|AT-hook transcription factor##AK131082|AKNA|80709|AT-hook transcription factor##AK160382|AKNA|80709|AT-hook transcription factor##AB075848|AKNA|80709|AT-hook transcription factor##AL110228|DFNB31|25861|deafness, autosomal recessive 31##NM_001083885|DFNB31|25861|deafness, autosomal recessive 31##BC142684|DFNB31|25861|deafness, autosomal recessive 31##AK056190|DFNB31|25861|deafness, autosomal recessive 31##BC142614|DFNB31|25861|deafness, autosomal recessive 31##NM_001173425|DFNB31|25861|deafness, autosomal recessive 31##NM_015404|DFNB31|25861|deafness, autosomal recessive 31##NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	0.992738	CTCF.p2:-2:0.993
chr3	24040550	24040685	reg1005336.p1	13.629	+	TSC_hg19_v1_chr3_+_23987516 AK301925 NM_001145425	-53055	+	TSC_hg19_v1_chr3_+_23986776 NM_005126 D16815 AK313464 BC045613 BC070035	-53802	+	NM_001253380 AY347528 L25899 AB529129 BT019672 CU677095 CU687134	-81345	+	GQ456948 GQ456949 GQ869479 GQ919288 AY286469 AY286468 AY286465 AY286471 TSC_hg19_v1_chr3_-_24536294 AY286467 AY286466 AK096628 M26747 NM_000461 NM_001128176 NM_001128177 NM_001252634 X04707	495627	-	AY286470 TSC_hg19_v1_chr3_-_24536493	495860	-	TSC_hg19_v1_chr3_+_25469751 AF157483 NM_016152	1429142	+	AK301925|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001145425|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001253380|RPL15|6138|ribosomal protein L15##AY347528|RPL15|6138|ribosomal protein L15##L25899|RPL15|6138|ribosomal protein L15##BT019672|RPL15|6138|ribosomal protein L15##GQ456948|THRB|7068|thyroid hormone receptor, beta##GQ456949|THRB|7068|thyroid hormone receptor, beta##GQ869479|THRB|7068|thyroid hormone receptor, beta##GQ919288|THRB|7068|thyroid hormone receptor, beta##AY286469|THRB|7068|thyroid hormone receptor, beta##AY286468|THRB|7068|thyroid hormone receptor, beta##AY286465|THRB|7068|thyroid hormone receptor, beta##AY286471|THRB|7068|thyroid hormone receptor, beta##AY286467|THRB|7068|thyroid hormone receptor, beta##AY286466|THRB|7068|thyroid hormone receptor, beta##AK096628|THRB|7068|thyroid hormone receptor, beta##M26747|THRB|7068|thyroid hormone receptor, beta##NM_000461|THRB|7068|thyroid hormone receptor, beta##NM_001128176|THRB|7068|thyroid hormone receptor, beta##NM_001128177|THRB|7068|thyroid hormone receptor, beta##NM_001252634|THRB|7068|thyroid hormone receptor, beta##X04707|THRB|7068|thyroid hormone receptor, beta##AY286470|THRB|7068|thyroid hormone receptor, beta##AF157483|RARB|5915|retinoic acid receptor, beta##NM_016152|RARB|5915|retinoic acid receptor, beta	0.06894	
chr4	100733059	100733194	reg1003642.p1	13.629	+	TSC_hg19_v1_chr4_+_100495977 AK225328 BC062696 X59657 AK290793 BC125110 BC125111 X75500 X91148	-237119	+	AK302602 NM_000253	-247887	+	AK000332 AK313548 NM_001134665 NM_001134666	-247946	-	NM_014395 AF186022 AF163254 AF161551 AK301355 AF178987 BC012924 AB528911 DQ893576 DQ894665	4899	+	AF130115 TSC_hg19_v1_chr4_-_100815585 AK311755 BC110402 BC005340 AK223311 AF201947 BC026245	82449	-	TSC_hg19_v1_chr4_-_100815667 NM_001243736 NM_021970	82558	-	AK225328|MTTP|4547|microsomal triglyceride transfer protein##BC062696|MTTP|4547|microsomal triglyceride transfer protein##X59657|MTTP|4547|microsomal triglyceride transfer protein##AK290793|MTTP|4547|microsomal triglyceride transfer protein##BC125110|MTTP|4547|microsomal triglyceride transfer protein##BC125111|MTTP|4547|microsomal triglyceride transfer protein##X75500|MTTP|4547|microsomal triglyceride transfer protein##X91148|MTTP|4547|microsomal triglyceride transfer protein##AK302602|MTTP|4547|microsomal triglyceride transfer protein##NM_000253|MTTP|4547|microsomal triglyceride transfer protein##AK000332|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##AK313548|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##NM_001134665|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##NM_001134666|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##NM_014395|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF186022|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF163254|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF161551|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AK301355|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF178987|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##BC012924|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##DQ893576|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##DQ894665|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF130115|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##AK311755|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC110402|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC005340|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##AK223311|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##AF201947|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC026245|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##NM_001243736|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##NM_021970|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	0.396375	CTCF.p2:-7:0.396
chr14	82456756	82456860	reg1003213.p1	13.627	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-456581	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-456660	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-591982	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	3539665	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	3539733	+	TSC_hg19_v1_chr14_+_85999692 AK297248	3542777	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.995158	CTCF.p2:-5:0.995
chr20	4153242	4153352	reg1002059.p1	13.627	+	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	-23774	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	-23862	+	AL096778 NM_007219 BC039584 TSC_hg19_v1_chr20_-_3996221 BC000213 BC003141 NM_001134337 NM_001134338 BC032738	-157132	-	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	76293	-	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	513679	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	549237	+	AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##AL096778|RNF24|11237|ring finger protein 24##NM_007219|RNF24|11237|ring finger protein 24##BC039584|RNF24|11237|ring finger protein 24##BC000213|RNF24|11237|ring finger protein 24##NM_001134337|RNF24|11237|ring finger protein 24##NM_001134338|RNF24|11237|ring finger protein 24##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)	0.977463	CTCF.p2:61:0.977
chr11	96076456	96076588	reg1003691.p2	13.626	+	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	-119	-	BC052990 BC012086 TSC_hg19_v1_chr11_-_95657272 BC034474 BX647997 NM_001243571 NM_016156 NM_201278 NM_201281 AB028996	-419166	-	AK293243 TSC_hg19_v1_chr11_-_95657092 AK302940 BC040432 AK291277	-419471	-	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	46520	-	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	46652	+	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	2815227	+	AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##BC052990|MTMR2|8898|myotubularin related protein 2##BC012086|MTMR2|8898|myotubularin related protein 2##BC034474|MTMR2|8898|myotubularin related protein 2##BX647997|MTMR2|8898|myotubularin related protein 2##NM_001243571|MTMR2|8898|myotubularin related protein 2##NM_016156|MTMR2|8898|myotubularin related protein 2##NM_201278|MTMR2|8898|myotubularin related protein 2##NM_201281|MTMR2|8898|myotubularin related protein 2##AB028996|MTMR2|8898|myotubularin related protein 2##AK293243|MTMR2|8898|myotubularin related protein 2##AK302940|MTMR2|8898|myotubularin related protein 2##BC040432|MTMR2|8898|myotubularin related protein 2##AK291277|MTMR2|8898|myotubularin related protein 2##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5	0.0	
chr11	107611800	107611932	reg1004983.p1	13.625	+	BC104185 BC113930 BC113987 BC104150 BC094685 AK312097 BC005261 U96094 NM_003063	-29107	-	TSC_hg19_v1_chr11_+_107462073 BC028725	-149790	+	TSC_hg19_v1_chr11_+_107461998 AK303689 AK054794	-149881	+	CU691672 TSC_hg19_v1_chr11_-_107729514 AK023080 BC048302	117639	-	AK300582 TSC_hg19_v1_chr11_-_107729530 BC039195	117722	-	NM_017515	118047	-	BC104185|SLN|6588|sarcolipin##BC113930|SLN|6588|sarcolipin##BC113987|SLN|6588|sarcolipin##BC104150|SLN|6588|sarcolipin##BC094685|SLN|6588|sarcolipin##AK312097|SLN|6588|sarcolipin##BC005261|SLN|6588|sarcolipin##U96094|SLN|6588|sarcolipin##NM_003063|SLN|6588|sarcolipin##BC028725|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK303689|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK054794|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK023080|SLC35F2|54733|solute carrier family 35, member F2##BC048302|SLC35F2|54733|solute carrier family 35, member F2##AK300582|SLC35F2|54733|solute carrier family 35, member F2##BC039195|SLC35F2|54733|solute carrier family 35, member F2##NM_017515|SLC35F2|54733|solute carrier family 35, member F2	0.095851	
chr14	53290431	53290579	reg1004445.p1	13.625	+	TSC_hg19_v1_chr14_-_53258376 NM_198066	-32120	-	TSC_hg19_v1_chr14_-_53258326 BC012179 AK090577	-32269	-	TSC_hg19_v1_chr14_+_53196923 BX647636 BC020265 BC146995 BC146998	-93548	+	TSC_hg19_v1_chr14_-_53417272 EU979385 CU675940 EU831994 EU832087	126774	-	Z24725 AF443279 TSC_hg19_v1_chr14_-_53417769 BX161467 AK291738	127215	-	TSC_hg19_v1_chr14_-_53417903 BC017327 NM_001134999 NM_001135000 NM_006832	127362	-	NM_198066|GNPNAT1|64841|glucosamine-phosphate N-acetyltransferase 1##BC012179|GNPNAT1|64841|glucosamine-phosphate N-acetyltransferase 1##AK090577|GNPNAT1|64841|glucosamine-phosphate N-acetyltransferase 1##BX647636|STYX|6815|serine/threonine/tyrosine interacting protein##BC020265|STYX|6815|serine/threonine/tyrosine interacting protein##BC146995|STYX|6815|serine/threonine/tyrosine interacting protein##BC146998|STYX|6815|serine/threonine/tyrosine interacting protein##EU979385|FERMT2|10979|fermitin family member 2##EU831994|FERMT2|10979|fermitin family member 2##EU832087|FERMT2|10979|fermitin family member 2##Z24725|FERMT2|10979|fermitin family member 2##AF443279|FERMT2|10979|fermitin family member 2##BX161467|FERMT2|10979|fermitin family member 2##AK291738|FERMT2|10979|fermitin family member 2##BC017327|FERMT2|10979|fermitin family member 2##NM_001134999|FERMT2|10979|fermitin family member 2##NM_001135000|FERMT2|10979|fermitin family member 2##NM_006832|FERMT2|10979|fermitin family member 2	0.936574	CTCF.p2:-35:0.937
chr17	28420643	28420771	reg1004980.p1	13.622	+	NM_198529 BX648689 BC137519	-152003	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	-163574	-	AK302745 AK303060 NM_001145053 AK299608	-163811	+	TSC_hg19_v1_chr17_+_28443846 AK297102 AL136806 NM_032141 AK094552 BC062425 AK313963 BC105044 BC105046 BC143417 BC143539 BC046116 BC040118 AF161358 BC016313 AB462988 AM392705 AM392719 CR533555	23134	+	NM_001045	142246	-	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	198252	-	NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AK297102|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AL136806|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_032141|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK094552|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC062425|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK313963|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105044|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105046|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143417|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143539|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC046116|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC040118|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AF161358|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC016313|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392705|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392719|NSRP1|84081|nuclear speckle splicing regulatory protein 1##CR533555|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_001045|SLC6A4|6532|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase	0.99977	CTCF.p2:5:1.000
chr2	243102225	243102337	reg1002506.p1	13.622	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	-71422	+	AK090909 AX746675 BC113517 BC113519 NM_173821	-290399	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	-301257	-	None	None	None	None	None	None	None	None	None	AK298283|LOC728323|728323|uncharacterized LOC728323##AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1	0.899243	CTCF.p2:22:0.883
chr1	186575007	186575135	reg1003538.p1	13.621	+	M33478 NM_002597	-144844	-	AF076464 NM_022576	-157216	-	BC069096 NM_022375	-205368	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	74419	-	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	223017	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	3871664	-	M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AF076464|PDC|5132|phosducin##NM_022576|PDC|5132|phosducin##BC069096|OCLM|10896|oculomedin##NM_022375|OCLM|10896|oculomedin##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C	0.430361	CTCF.p2:0:0.430
chr16	52225570	52225709	reg1005158.p1	13.621	+	NM_001242473	-117793	-	BC113881 BC113906 BC131548 Y18265 TSC_hg19_v1_chr16_-_51185251 AK295103 NM_002968	-1040227	-	AK307835 NM_001127892	-1041132	-	NM_001080430	355166	-	AK299202 NM_001146188	356074	-	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	863242	+	NM_001242473|LOC388276|388276|hCG2045437##BC113881|SALL1|6299|sal-like 1 (Drosophila)##BC113906|SALL1|6299|sal-like 1 (Drosophila)##BC131548|SALL1|6299|sal-like 1 (Drosophila)##Y18265|SALL1|6299|sal-like 1 (Drosophila)##AK295103|SALL1|6299|sal-like 1 (Drosophila)##NM_002968|SALL1|6299|sal-like 1 (Drosophila)##AK307835|SALL1|6299|sal-like 1 (Drosophila)##NM_001127892|SALL1|6299|sal-like 1 (Drosophila)##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9	0.998526	CTCF.p2:3:0.999
chr7	64772787	64772925	reg1005915.p1	13.621	+	TSC_hg19_v1_chr7_+_64601445 AK057766	-171336	+	TSC_hg19_v1_chr7_+_64498727 BX649060 BC071617	-274150	+	TSC_hg19_v1_chr7_-_64467066 AK295189 AK097499 NM_001007253	-305792	-	TSC_hg19_v1_chr7_+_64838761 BX647875 NM_007139 NM_152626 BC040594	65894	+	TSC_hg19_v1_chr7_+_64838793 AK091618 AX747097 BC036439 M61872	65951	+	TSC_hg19_v1_chr7_-_65215912 BX647963	443062	-	AK057766|INTS4L1|285905|integrator complex subunit 4-like 1##BX649060|CCT6P3|643180|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 3##BC071617|CCT6P3|643180|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 3##AK295189|ERV3-1|2086|endogenous retrovirus group 3, member 1##NM_001007253|ERV3-1|2086|endogenous retrovirus group 3, member 1##BX647875|ZNF92|168374|zinc finger protein 92##NM_007139|ZNF92|168374|zinc finger protein 92##NM_152626|ZNF92|168374|zinc finger protein 92##BC040594|ZNF92|168374|zinc finger protein 92##AK091618|ZNF92|168374|zinc finger protein 92##BC036439|ZNF92|168374|zinc finger protein 92##M61872|ZNF92|168374|zinc finger protein 92	0.998068	CTCF.p2:4:0.998
chr1	236135140	236135270	reg1003568.p1	13.619	+	NM_000081 U67615 TSC_hg19_v1_chr1_-_236030233	-104961	-	TSC_hg19_v1_chr1_-_236030193 BC020793	-105022	-	BC022485 NM_001098721 NM_004485	-321152	-	TSC_hg19_v1_chr1_-_236228375 AB209448 CU692272	93172	-	TSC_hg19_v1_chr1_-_236228393 BC045606 M30269	93220	-	TSC_hg19_v1_chr1_-_236228477 NM_002508	93273	-	NM_000081|LYST|1130|lysosomal trafficking regulator##U67615|LYST|1130|lysosomal trafficking regulator##BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##AB209448|NID1|4811|nidogen 1##BC045606|NID1|4811|nidogen 1##M30269|NID1|4811|nidogen 1##NM_002508|NID1|4811|nidogen 1	0.830676	CTCF.p2:13:0.831
chr6	151063059	151063178	reg1004609.p1	13.618	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	-142098	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	-372960	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-598877	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	123714	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	123803	+	TSC_hg19_v1_chr6_+_151187064 AL117452	123983	+	NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AL117452|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.984064	CTCF.p2:8:0.984
chr10	69615498	69615607	reg1002537.p1	13.617	+	CR457184 AF176013 BC017018 AK289537 AF176012 NM_021800 NM_201262	-17700	-	AF091606 AK313882 NM_013266	-159615	-	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	-190156	-	TSC_hg19_v1_chr10_+_69644413 AF083106 NM_012238 AF235040	28855	+	AL136741 BC012499 TSC_hg19_v1_chr10_+_69644874	29240	+	AK289743 NM_001142498 TSC_hg19_v1_chr10_+_69644954	29397	+	CR457184|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176013|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##BC017018|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AK289537|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176012|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_021800|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_201262|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF083106|SIRT1|23411|sirtuin 1##NM_012238|SIRT1|23411|sirtuin 1##AF235040|SIRT1|23411|sirtuin 1##AL136741|SIRT1|23411|sirtuin 1##BC012499|SIRT1|23411|sirtuin 1##AK289743|SIRT1|23411|sirtuin 1##NM_001142498|SIRT1|23411|sirtuin 1	0.0	
chr1	41315757	41315889	reg1002110.p1	13.617	+	TSC_hg19_v1_chr1_+_41284599 AK074957	-31206	+	TSC_hg19_v1_chr1_+_41249485 AF105202 NM_004700 NM_172163	-66242	+	AF191744 AB385526 BT020081 U62296 TSC_hg19_v1_chr1_+_41204591	-111273	+	TSC_hg19_v1_chr1_-_41328006 BC052559 NM_133467	12186	-	BC035496 TSC_hg19_v1_chr1_-_41328020	12197	-	TSC_hg19_v1_chr1_+_41444968 NM_001905	129164	+	AK074957|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##AF105202|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_004700|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_172163|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##AF191744|NFYC|4802|nuclear transcription factor Y, gamma##BT020081|NFYC|4802|nuclear transcription factor Y, gamma##U62296|NFYC|4802|nuclear transcription factor Y, gamma##BC052559|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##NM_133467|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##BC035496|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##NM_001905|CTPS|1503|CTP synthase	0.805973	CTCF.p2:37:0.806
chr16	77709756	77709890	reg1004865.p1	13.617	+	AK293831 BC063283 NM_199355	-240853	-	NM_001129979 TSC_hg19_v1_chr16_+_77233375	-476462	+	AF442486 AB463127 TSC_hg19_v1_chr16_+_77225481	-484398	+	NM_001105663 NM_001243657 NM_001243660 NM_001243661 TSC_hg19_v1_chr16_+_77756410 AK296963 EU981826	46610	+	TSC_hg19_v1_chr16_+_77822482 AK290153 BC033537 NM_020927 AB046796 CU689646	112666	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	346627	+	AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like##AF442486|MON1B|22879|MON1 homolog B (yeast)##NM_001105663|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243657|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243660|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243661|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK296963|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##EU981826|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK290153|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##BC033537|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_020927|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AB046796|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A	0.996506	CTCF.p2:-12:0.997
chr15	72448475	72448598	reg1002944.p2	13.616	+	AF308450 TSC_hg19_v1_chr15_+_72410743 BC031411	-37788	+	AK292298 NM_001172111 NM_145204 TSC_hg19_v1_chr15_+_72410636 AY008293	-37889	+	TSC_hg19_v1_chr15_-_72410432 BC150294 BC060886 NM_006901	-38141	-	BC038451 AK095072 NM_001012642 TSC_hg19_v1_chr15_-_72490157	41599	-	Z36786 TSC_hg19_v1_chr15_-_72501152 BC019265	52588	-	AK309781 NM_001206799	73526	-	AF308450|SENP8|123228|SUMO/sentrin specific peptidase family member 8##BC031411|SENP8|123228|SUMO/sentrin specific peptidase family member 8##AK292298|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172111|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_145204|SENP8|123228|SUMO/sentrin specific peptidase family member 8##AY008293|SENP8|123228|SUMO/sentrin specific peptidase family member 8##BC150294|MYO9A|4649|myosin IXA##BC060886|MYO9A|4649|myosin IXA##NM_006901|MYO9A|4649|myosin IXA##BC038451|GRAMD2|196996|GRAM domain containing 2##AK095072|GRAMD2|196996|GRAM domain containing 2##NM_001012642|GRAMD2|196996|GRAM domain containing 2##BC019265|PKM2|5315|pyruvate kinase, muscle##AK309781|PKM2|5315|pyruvate kinase, muscle##NM_001206799|PKM2|5315|pyruvate kinase, muscle	0.847733	CTCF.p2:14:0.848
chr7	95106397	95106542	reg1004851.p1	13.616	+	TSC_hg19_v1_chr7_-_95064341 AB102891 CU692318 AB591009 L48513 BC040010 AF001602 AF001601 BC073739 AK296029 BC093006 BC046160 AK291103 AK308065 AK315209 AK296636 BC009728 NM_000305 NM_001018161 AK301313	-42108	-	L48516 AF320003 AF329433 CU687094 TSC_hg19_v1_chr7_-_95025687 AK301772 BC070374 AK304282 NM_000940	-80813	-	TSC_hg19_v1_chr7_-_94953845 D84371 U53784 Z70723 NM_000446	-152614	-	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	8824	+	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	119394	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	295439	+	AB102891|PON2|5445|paraoxonase 2##L48513|PON2|5445|paraoxonase 2##BC040010|PON2|5445|paraoxonase 2##AF001602|PON2|5445|paraoxonase 2##AF001601|PON2|5445|paraoxonase 2##AK296029|PON2|5445|paraoxonase 2##BC093006|PON2|5445|paraoxonase 2##BC046160|PON2|5445|paraoxonase 2##AK291103|PON2|5445|paraoxonase 2##AK308065|PON2|5445|paraoxonase 2##AK315209|PON2|5445|paraoxonase 2##AK296636|PON2|5445|paraoxonase 2##BC009728|PON2|5445|paraoxonase 2##NM_000305|PON2|5445|paraoxonase 2##NM_001018161|PON2|5445|paraoxonase 2##AK301313|PON2|5445|paraoxonase 2##L48516|PON3|5446|paraoxonase 3##AF320003|PON3|5446|paraoxonase 3##AF329433|PON3|5446|paraoxonase 3##BC070374|PON3|5446|paraoxonase 3##AK304282|PON3|5446|paraoxonase 3##NM_000940|PON3|5446|paraoxonase 3##D84371|PON1|5444|paraoxonase 1##U53784|PON1|5444|paraoxonase 1##Z70723|PON1|5444|paraoxonase 1##NM_000446|PON1|5444|paraoxonase 1##BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1	0.872764	CTCF.p2:15:0.873
chr1	234201703	234201829	reg1004717.p1	13.615	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-161154	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-451847	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	-451943	+	TSC_hg19_v1_chr1_+_234350005 BC037878	148240	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	307606	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	413094	-	AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##BC037878|SLC35F3|148641|solute carrier family 35, member F3##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1	0.996016	CTCF.p2:8:0.996
chr14	24578145	24578282	reg1003624.p2	13.615	+	TSC_hg19_v1_chr14_+_24563519 NM_001018073 NM_004563 AK311710 AK316206 AK129934 AK307913 X92720 BC001454 BX248272 CU674712 CR456913	-14722	+	M95925 M81840 NM_006177 BC012395 AB593104 AB593106 AB593102	-24383	-	AK314182 BC018046 AB009288 NM_006032 TSC_hg19_v1_chr14_+_24540770 AK294460 AK222675 AL137688	-37444	+	NM_001163484 TSC_hg19_v1_chr14_+_24583976	5728	+	TSC_hg19_v1_chr14_+_24583985 NM_025230 AB209073	5779	+	TSC_hg19_v1_chr14_+_24584020 AK074296 AK307849 BC067132	5814	+	NM_001018073|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##NM_004563|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK311710|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK316206|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK129934|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK307913|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##X92720|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##BC001454|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##BX248272|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##CR456913|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##M95925|NRL|4901|neural retina leucine zipper##M81840|NRL|4901|neural retina leucine zipper##NM_006177|NRL|4901|neural retina leucine zipper##BC012395|NRL|4901|neural retina leucine zipper##AB593104|NRL|4901|neural retina leucine zipper##AB593106|NRL|4901|neural retina leucine zipper##AB593102|NRL|4901|neural retina leucine zipper##AK314182|CPNE6|9362|copine VI (neuronal)##BC018046|CPNE6|9362|copine VI (neuronal)##AB009288|CPNE6|9362|copine VI (neuronal)##NM_006032|CPNE6|9362|copine VI (neuronal)##AK294460|CPNE6|9362|copine VI (neuronal)##AK222675|CPNE6|9362|copine VI (neuronal)##AL137688|CPNE6|9362|copine VI (neuronal)##NM_001163484|DCAF11|80344|DDB1 and CUL4 associated factor 11##NM_025230|DCAF11|80344|DDB1 and CUL4 associated factor 11##AB209073|DCAF11|80344|DDB1 and CUL4 associated factor 11##AK074296|DCAF11|80344|DDB1 and CUL4 associated factor 11##AK307849|DCAF11|80344|DDB1 and CUL4 associated factor 11##BC067132|DCAF11|80344|DDB1 and CUL4 associated factor 11	0.992625	CTCF.p2:-8:0.993
chr20	30440637	30440741	reg1004417.p1	13.615	+	AF042831 BT009768 AB464535 DQ896105 EU176391 BC013408 NM_004118	-7320	-	AJ272502 BC092413 NM_033118 BX647635	-33505	+	NM_012112 TSC_hg19_v1_chr20_+_30327092 AK312549 AB024704 AF098158 AF287265 BC020207 BC004136	-113652	+	NM_001012644	17111	-	NM_177991 AK091960 CU691186	17386	-	BC056911 AK097430 NM_080611	17726	-	AF042831|FOXS1|2307|forkhead box S1##BT009768|FOXS1|2307|forkhead box S1##DQ896105|FOXS1|2307|forkhead box S1##EU176391|FOXS1|2307|forkhead box S1##BC013408|FOXS1|2307|forkhead box S1##NM_004118|FOXS1|2307|forkhead box S1##AJ272502|MYLK2|85366|myosin light chain kinase 2##BC092413|MYLK2|85366|myosin light chain kinase 2##NM_033118|MYLK2|85366|myosin light chain kinase 2##BX647635|MYLK2|85366|myosin light chain kinase 2##NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##NM_001012644|DUSP15|128853|dual specificity phosphatase 15##NM_177991|DUSP15|128853|dual specificity phosphatase 15##AK091960|DUSP15|128853|dual specificity phosphatase 15##BC056911|DUSP15|128853|dual specificity phosphatase 15##AK097430|C20orf57|83747|chromosome 20 open reading frame 57##NM_080611|DUSP15|128853|dual specificity phosphatase 15	0.964676	CTCF.p2:-13:0.965
chr2	25419411	25419537	reg1005059.p1	13.614	+	NM_000939 NM_001035256	-27916	-	TSC_hg19_v1_chr2_+_25264954 NM_014971 AB023170	-154497	+	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	-224607	-	TSC_hg19_v1_chr2_-_25466801 BC018214	47334	-	TSC_hg19_v1_chr2_-_25467080 BC023612	47661	-	TSC_hg19_v1_chr2_-_25468920 AK025230	49504	-	NM_000939|POMC|5443|proopiomelanocortin##NM_001035256|POMC|5443|proopiomelanocortin##NM_014971|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AB023170|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC018214|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.999643	CTCF.p2:6:1.000
chr2	46877777	46877918	reg1004723.p1	13.614	+	TSC_hg19_v1_chr2_+_46844353 NM_014171 AK291298 AF161488 BC018653 BC006980 BC006979	-33494	+	TSC_hg19_v1_chr2_-_46844187 BC021725 BC029408 AK291108 NM_002643 NM_173074	-33630	-	BC010864 D13435 TSC_hg19_v1_chr2_-_46844167 BC039303	-33685	-	TSC_hg19_v1_chr2_+_46926049 AK290194 AK296796 AB014571 AL136896 NM_014011	48226	+	TSC_hg19_v1_chr2_+_46926340 BC032862 AF073958 NM_144949	48554	+	TSC_hg19_v1_chr2_-_47134945 M23161	257164	-	NM_014171|CRIPT|9419|cysteine-rich PDZ-binding protein##AK291298|CRIPT|9419|cysteine-rich PDZ-binding protein##AF161488|CRIPT|9419|cysteine-rich PDZ-binding protein##BC018653|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006980|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006979|CRIPT|9419|cysteine-rich PDZ-binding protein##BC021725|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##BC029408|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##AK291108|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##NM_002643|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##NM_173074|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##D13435|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##AK290194|SOCS5|9655|suppressor of cytokine signaling 5##AB014571|SOCS5|9655|suppressor of cytokine signaling 5##AL136896|SOCS5|9655|suppressor of cytokine signaling 5##NM_014011|SOCS5|9655|suppressor of cytokine signaling 5##BC032862|SOCS5|9655|suppressor of cytokine signaling 5##AF073958|SOCS5|9655|suppressor of cytokine signaling 5##NM_144949|SOCS5|9655|suppressor of cytokine signaling 5##M23161|MCFD2|90411|multiple coagulation factor deficiency 2	0.996593	CTCF.p2:13:0.997
chr8	95369438	95369559	reg1003963.p1	13.613	+	TSC_hg19_v1_chr8_-_95274548 AK314017 BC022010 NM_005261 NM_181702	-94950	-	U10550 TSC_hg19_v1_chr8_-_95274525	-94976	-	AK312873 NM_001144663	-139968	-	AF007866 NM_001205263	79657	-	BC001965 AF112481 BC020668 AK290437 TSC_hg19_v1_chr8_-_95487344 NM_001205262 NM_012415	117821	-	AB037850 AF116724 HQ258534 TSC_hg19_v1_chr8_-_95565696 AL832487 BC112288 BC113380 NM_015496 NM_183009	196209	-	AK314017|GEM|2669|GTP binding protein overexpressed in skeletal muscle##BC022010|GEM|2669|GTP binding protein overexpressed in skeletal muscle##NM_005261|GEM|2669|GTP binding protein overexpressed in skeletal muscle##NM_181702|GEM|2669|GTP binding protein overexpressed in skeletal muscle##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205262|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AB037850|KIAA1429|25962|KIAA1429##AF116724|KIAA1429|25962|KIAA1429##AL832487|KIAA1429|25962|KIAA1429##BC112288|KIAA1429|25962|KIAA1429##BC113380|KIAA1429|25962|KIAA1429##NM_015496|KIAA1429|25962|KIAA1429##NM_183009|KIAA1429|25962|KIAA1429	0.954874	CTCF.p2:2:0.955
chr1	114825559	114825663	reg1003501.p2	13.612	+	BC044948 NM_001253772	-129140	-	AK056448 NM_205848	-130550	-	AY358954 NM_020190 AY464015 AK092766 AX747716 AK075369 TSC_hg19_v1_chr1_+_114522099 AK297902 AF201945 AK223221 BC009920 AK222471 AK075479 AK075353 AK075544 AB590196 DQ892781 DQ896028 CU679529	-303528	+	TSC_hg19_v1_chr1_-_115053724 AB384564 AB029036	228099	-	TSC_hg19_v1_chr1_-_115053767 AF119043 AF220136 AF220137 NM_015906 NM_033020	228167	-	AB451245 AB451369 AB528339 AF081788 BT019390 CR542037 CU675083 DQ892529 EU176700 EU832613 EU832684 TSC_hg19_v1_chr1_-_115124237 BC005285 BC012623 BC039238 AK222637 AK313141 BC022880 AB020623 NM_005872	298632	-	BC044948|SYT6|148281|synaptotagmin VI##NM_001253772|SYT6|148281|synaptotagmin VI##AK056448|SYT6|148281|synaptotagmin VI##NM_205848|SYT6|148281|synaptotagmin VI##AY358954|OLFML3|56944|olfactomedin-like 3##NM_020190|OLFML3|56944|olfactomedin-like 3##AY464015|OLFML3|56944|olfactomedin-like 3##AK092766|OLFML3|56944|olfactomedin-like 3##AK075369|OLFML3|56944|olfactomedin-like 3##AK297902|OLFML3|56944|olfactomedin-like 3##AF201945|OLFML3|56944|olfactomedin-like 3##AK223221|OLFML3|56944|olfactomedin-like 3##BC009920|OLFML3|56944|olfactomedin-like 3##AK222471|OLFML3|56944|olfactomedin-like 3##AK075479|OLFML3|56944|olfactomedin-like 3##AK075353|OLFML3|56944|olfactomedin-like 3##AK075544|OLFML3|56944|olfactomedin-like 3##DQ892781|OLFML3|56944|olfactomedin-like 3##DQ896028|OLFML3|56944|olfactomedin-like 3##AB029036|TRIM33|51592|tripartite motif containing 33##AF119043|TRIM33|51592|tripartite motif containing 33##AF220136|TRIM33|51592|tripartite motif containing 33##AF220137|TRIM33|51592|tripartite motif containing 33##NM_015906|TRIM33|51592|tripartite motif containing 33##NM_033020|TRIM33|51592|tripartite motif containing 33##AB451245|BCAS2|10286|breast carcinoma amplified sequence 2##AB451369|BCAS2|10286|breast carcinoma amplified sequence 2##AF081788|BCAS2|10286|breast carcinoma amplified sequence 2##BT019390|BCAS2|10286|breast carcinoma amplified sequence 2##CR542037|BCAS2|10286|breast carcinoma amplified sequence 2##DQ892529|BCAS2|10286|breast carcinoma amplified sequence 2##EU176700|BCAS2|10286|breast carcinoma amplified sequence 2##EU832613|BCAS2|10286|breast carcinoma amplified sequence 2##EU832684|BCAS2|10286|breast carcinoma amplified sequence 2##BC005285|BCAS2|10286|breast carcinoma amplified sequence 2##BC012623|BCAS2|10286|breast carcinoma amplified sequence 2##BC039238|BCAS2|10286|breast carcinoma amplified sequence 2##AK222637|BCAS2|10286|breast carcinoma amplified sequence 2##AK313141|BCAS2|10286|breast carcinoma amplified sequence 2##BC022880|BCAS2|10286|breast carcinoma amplified sequence 2##AB020623|BCAS2|10286|breast carcinoma amplified sequence 2##NM_005872|BCAS2|10286|breast carcinoma amplified sequence 2	0.947315	CTCF.p2:9:0.947
chr12	57576858	57577007	reg1005568.p1	13.612	+	TSC_hg19_v1_chr12_+_57522452 BC045107	-54469	+	TSC_hg19_v1_chr12_+_57522265 BC052593 BC072015 NM_002332 X13916	-54650	+	TSC_hg19_v1_chr12_-_57505177 NM_001178078 NM_001178080 NM_001178081 NM_003153	-71735	-	AY358614 NM_007224 TSC_hg19_v1_chr12_+_57610601 BC036679 AK094231 AK290949 BC053581 CU690992	33732	+	NM_001166356 NM_005412 TSC_hg19_v1_chr12_+_57623504 AK055053 AK223555 AK298231 AK301339 AK303827 BC032584 BC044211 AK295941 BC008066 BC012833 BC011911 BC091501 CU680112 CU689432 AB527799 BT006866 DQ891309 DQ894430	46526	+	NM_001166358 BX647711 AK301443 TSC_hg19_v1_chr12_+_57623972 BX648847 NM_001166359 NM_001166357 BC004189 BC004215 BC008711 AK296183 AK297173 AK315916	47056	+	BC045107|LRP1|4035|low density lipoprotein receptor-related protein 1##BC052593|LRP1|4035|low density lipoprotein receptor-related protein 1##BC072015|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_002332|LRP1|4035|low density lipoprotein receptor-related protein 1##X13916|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_001178078|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178080|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178081|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_003153|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AY358614|NXPH4|11247|neurexophilin 4##NM_007224|NXPH4|11247|neurexophilin 4##BC036679|NXPH4|11247|neurexophilin 4##AK094231|NXPH4|11247|neurexophilin 4##AK290949|NXPH4|11247|neurexophilin 4##BC053581|NXPH4|11247|neurexophilin 4##NM_001166356|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_005412|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK055053|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK223555|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK298231|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301339|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK303827|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC032584|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC044211|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK295941|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008066|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC011911|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC091501|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BT006866|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ891309|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ894430|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166358|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX647711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301443|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX648847|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166359|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166357|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK296183|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK297173|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK315916|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)	0.470659	CTCF.p2:-1:0.418
chr15	38856321	38856468	reg1004322.p1	13.612	+	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-110049	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	-311372	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	-311999	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	537	-	AK093014 AX747856 BC119016 BC119810 NM_207444	132404	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	686531	+	NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54	0.998327	CTCF.p2:0:0.998
chr21	35955216	35955338	reg1004032.p2	13.612	+	CR542065 AK299444 TSC_hg19_v1_chr21_-_35899121 AK293293 U85267 NM_203418	-56124	-	TSC_hg19_v1_chr21_-_35884509 AK095442 BC046224	-70740	-	AK304336 NM_000219 BC069055	-71625	-	NM_203417 U85265	31467	-	BT007363 CU678256 AF303449 U85266 TSC_hg19_v1_chr21_-_35987486 BC002864 AK092184 AX747397 NM_004414 AY325903	32069	-	AF448438 AF448439 NM_053277	86410	+	CR542065|RCAN1|1827|regulator of calcineurin 1##AK299444|RCAN1|1827|regulator of calcineurin 1##AK293293|RCAN1|1827|regulator of calcineurin 1##U85267|RCAN1|1827|regulator of calcineurin 1##NM_203418|RCAN1|1827|regulator of calcineurin 1##AK095442|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC046224|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK304336|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_000219|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC069055|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_203417|RCAN1|1827|regulator of calcineurin 1##U85265|RCAN1|1827|regulator of calcineurin 1##BT007363|RCAN1|1827|regulator of calcineurin 1##AF303449|RCAN1|1827|regulator of calcineurin 1##U85266|RCAN1|1827|regulator of calcineurin 1##BC002864|RCAN1|1827|regulator of calcineurin 1##AK092184|RCAN1|1827|regulator of calcineurin 1##NM_004414|RCAN1|1827|regulator of calcineurin 1##AY325903|RCAN1|1827|regulator of calcineurin 1##AF448438|CLIC6|54102|chloride intracellular channel 6##AF448439|CLIC6|54102|chloride intracellular channel 6##NM_053277|CLIC6|54102|chloride intracellular channel 6	0.0	
chr3	47040143	47040277	reg1005142.p1	13.610	+	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	-10740	+	TSC_hg19_v1_chr3_+_47021155 NM_015175 AK131104 AB384492	-18963	+	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	-21965	-	TSC_hg19_v1_chr3_-_47098906 AK026837	58733	-	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	165229	-	BC015311 NM_001134878 NM_022342 NM_182902	284085	-	AK092871|NBEAL2|23218|neurobeachin-like 2##NM_015175|NBEAL2|23218|neurobeachin-like 2##AK131104|NBEAL2|23218|neurobeachin-like 2##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12##AK026837|SETD2|29072|SET domain containing 2##AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9	0.198189	
chr6	41743753	41743876	reg1004885.p1	13.610	+	J04443 BC042578 BC073740 U75272 TSC_hg19_v1_chr6_-_41715136 AK223274 AK301298 AK301325 NM_001166424 NM_002630	-28697	-	TSC_hg19_v1_chr6_-_41703962 AK298390 AJ608786 NM_001167827	-39842	-	M33782 TSC_hg19_v1_chr6_-_41703347	-40468	-	TSC_hg19_v1_chr6_-_41747644 NM_006653	3875	-	AL137721 NM_013397 TSC_hg19_v1_chr6_+_41748522 BC027896 AK057184	4771	+	TSC_hg19_v1_chr6_+_41754422 AJ420506	10635	+	J04443|PGC|5225|progastricsin (pepsinogen C)##BC042578|PGC|5225|progastricsin (pepsinogen C)##BC073740|PGC|5225|progastricsin (pepsinogen C)##U75272|PGC|5225|progastricsin (pepsinogen C)##AK223274|PGC|5225|progastricsin (pepsinogen C)##AK301298|PGC|5225|progastricsin (pepsinogen C)##AK301325|PGC|5225|progastricsin (pepsinogen C)##NM_001166424|PGC|5225|progastricsin (pepsinogen C)##NM_002630|PGC|5225|progastricsin (pepsinogen C)##AK298390|TFEB|7942|transcription factor EB##AJ608786|TFEB|7942|transcription factor EB##NM_001167827|TFEB|7942|transcription factor EB##M33782|TFEB|7942|transcription factor EB##NM_006653|FRS3|10817|fibroblast growth factor receptor substrate 3##NM_013397|PRICKLE4|29964|prickle homolog 4 (Drosophila)##AJ420506|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)	0.896791	CTCF.p2:5:0.897
chr17	1533385	1533521	reg1005283.p3	13.609	+	TSC_hg19_v1_chr17_-_1532115 BC027923 NM_152346 BC071859	-1309	-	AF289592 TSC_hg19_v1_chr17_-_1531711 AB120364	-1813	-	BC082976 TSC_hg19_v1_chr17_-_1466077 BC027177 D30036 M73704 BC045108 BC068538 NM_006224	-67371	-	D63483 AK310174 AB052950 AB052949 AB052947 D86864 TSC_hg19_v1_chr17_-_1549050 AK291810 AB052948 BC039735 NM_003693 NM_145350 NM_145352 AK298737	15584	-	DQ892467 DQ895680 TSC_hg19_v1_chr17_-_1553162 BC031621 AF370391 AJ404317 AK055755 AK314767 AJ278711 NM_031430	19792	-	TSC_hg19_v1_chr17_-_1588115 AB007510 AF092565	54655	-	BC027923|SLC43A2|124935|solute carrier family 43, member 2##NM_152346|SLC43A2|124935|solute carrier family 43, member 2##BC071859|SLC43A2|124935|solute carrier family 43, member 2##AF289592|SLC43A2|124935|solute carrier family 43, member 2##AB120364|SLC43A2|124935|solute carrier family 43, member 2##BC082976|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC027177|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D30036|PITPNA|5306|phosphatidylinositol transfer protein, alpha##M73704|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC045108|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC068538|PITPNA|5306|phosphatidylinositol transfer protein, alpha##NM_006224|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D63483|SCARF1|8578|scavenger receptor class F, member 1##AK310174|SCARF1|8578|scavenger receptor class F, member 1##AB052950|SCARF1|8578|scavenger receptor class F, member 1##AB052949|SCARF1|8578|scavenger receptor class F, member 1##AB052947|SCARF1|8578|scavenger receptor class F, member 1##D86864|SCARF1|8578|scavenger receptor class F, member 1##AK291810|SCARF1|8578|scavenger receptor class F, member 1##AB052948|SCARF1|8578|scavenger receptor class F, member 1##BC039735|SCARF1|8578|scavenger receptor class F, member 1##NM_003693|SCARF1|8578|scavenger receptor class F, member 1##NM_145350|SCARF1|8578|scavenger receptor class F, member 1##NM_145352|SCARF1|8578|scavenger receptor class F, member 1##AK298737|SCARF1|8578|scavenger receptor class F, member 1##DQ892467|RILP|83547|Rab interacting lysosomal protein##DQ895680|RILP|83547|Rab interacting lysosomal protein##BC031621|RILP|83547|Rab interacting lysosomal protein##AF370391|RILP|83547|Rab interacting lysosomal protein##AJ404317|RILP|83547|Rab interacting lysosomal protein##AK055755|RILP|83547|Rab interacting lysosomal protein##AK314767|RILP|83547|Rab interacting lysosomal protein##AJ278711|RILP|83547|Rab interacting lysosomal protein##NM_031430|RILP|83547|Rab interacting lysosomal protein##AB007510|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##AF092565|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	0.949741	CTCF.p2:13:0.950
chr2	143868554	143868688	reg1005029.p1	13.609	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-233381	+	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	-233415	+	AF176832 NM_018557	-979352	-	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	18309	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	18370	+	NM_024659	1126284	-	BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1	0.998006	CTCF.p2:-13:0.998
chr3	14443818	14443908	reg1008664.p1	13.609	+	TSC_hg19_v1_chr3_+_14220355 AJ238095 AB463841 CR457185	-223512	+	TSC_hg19_v1_chr3_+_14220336 AF182418 AF182289 BC007055 AK312189	-223529	+	NM_014463 TSC_hg19_v1_chr3_+_14220319	-223589	+	TSC_hg19_v1_chr3_+_14444072 AK303649	206	+	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	253	+	NM_001080423	139724	-	AJ238095|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##CR457185|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182418|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182289|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC007055|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312189|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_014463|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2	0.0	
chr3	40626169	40626290	reg1004143.p1	13.609	+	TSC_hg19_v1_chr3_+_40566471 BC101619 BC113415 CR749268	-59729	+	TSC_hg19_v1_chr3_+_40566380 AK127181 NM_001098414 NM_198484 AX721066 AK074366	-59827	+	AK131232 AX721156 NM_175888 AK093599 AX748220 TSC_hg19_v1_chr3_+_40547598	-78645	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	614720	+	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	614795	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	1377330	-	BC101619|ZNF621|285268|zinc finger protein 621##BC113415|ZNF621|285268|zinc finger protein 621##CR749268|ZNF621|285268|zinc finger protein 621##AK127181|ZNF621|285268|zinc finger protein 621##NM_001098414|ZNF621|285268|zinc finger protein 621##NM_198484|ZNF621|285268|zinc finger protein 621##AK074366|ZNF621|285268|zinc finger protein 621##AK131232|ZNF620|253639|zinc finger protein 620##NM_175888|ZNF620|253639|zinc finger protein 620##AK093599|ZNF620|253639|zinc finger protein 620##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)	0.999524	CTCF.p2:-15:1.000
chr4	82388687	82388797	reg1003555.p1	13.609	+	AB528214 D70899 NM_006259 X94612	-262535	-	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	-436600	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-1131845	+	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	4241	-	TSC_hg19_v1_chr4_-_82393062 AK291459 BC036784 AK303625 AK056257 NM_152545	4318	-	D55671 TSC_hg19_v1_chr4_-_83294725	905933	-	D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B##AK291459|RASGEF1B|153020|RasGEF domain family, member 1B##BC036784|RASGEF1B|153020|RasGEF domain family, member 1B##AK303625|RASGEF1B|153020|RasGEF domain family, member 1B##AK056257|RASGEF1B|153020|RasGEF domain family, member 1B##NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B##D55671|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	0.102702	
chr1	66153484	66153598	reg1003231.p2	13.608	+	TSC_hg19_v1_chr1_+_65991390 U52912 U52913 U52914	-162134	+	TSC_hg19_v1_chr1_+_65991358 BC031086 NM_001198687 NM_001198688 NM_001198689	-162171	+	TSC_hg19_v1_chr1_+_65886400 NM_001003679 NM_001003680 NM_002303 U43168 U66495 U66496 Y12670 AK074841 AK290208 BC056250 AK094801 AK309370 NM_001198681 BC131779 EU832353 EU832438 CR541647 CR541737 U66497	-267179	+	NM_001037341 CR749667 BC071607 BC036108	104654	+	AK289969 NM_002600 L20966	105318	+	AB209081 NM_001037340 AK290006	304862	+	U52912|LEPR|3953|leptin receptor##U52913|LEPR|3953|leptin receptor##U52914|LEPR|3953|leptin receptor##BC031086|LEPR|3953|leptin receptor##NM_001198687|LEPR|3953|leptin receptor##NM_001198688|LEPR|3953|leptin receptor##NM_001198689|LEPR|3953|leptin receptor##NM_001003679|LEPR|3953|leptin receptor##NM_001003680|LEPR|3953|leptin receptor##NM_002303|LEPR|3953|leptin receptor##U43168|LEPR|3953|leptin receptor##U66495|LEPR|3953|leptin receptor##U66496|LEPR|3953|leptin receptor##Y12670|LEPROT|54741|leptin receptor overlapping transcript##AK074841|LEPROT|54741|leptin receptor overlapping transcript##AK290208|LEPR|3953|leptin receptor##BC056250|LEPROT|54741|leptin receptor overlapping transcript##AK094801|LEPROT|54741|leptin receptor overlapping transcript##AK309370|LEPROT|54741|leptin receptor overlapping transcript##NM_001198681|LEPROT|54741|leptin receptor overlapping transcript##BC131779|LEPR|3953|leptin receptor##EU832353|LEPROT|54741|leptin receptor overlapping transcript##EU832438|LEPROT|54741|leptin receptor overlapping transcript##CR541647|LEPROT|54741|leptin receptor overlapping transcript##CR541737|LEPROT|54741|leptin receptor overlapping transcript##U66497|LEPR|3953|leptin receptor##NM_001037341|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##CR749667|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC071607|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC036108|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK289969|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_002600|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L20966|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	0.999894	CTCF.p2:6:1.000
chr2	230873018	230873156	reg1004066.p1	13.608	+	TSC_hg19_v1_chr2_+_230787218 BC017869 BC022538 NM_174899 BC033935 AK289655 AK309702	-85870	+	TSC_hg19_v1_chr2_-_230786712 AK310971	-86338	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	-86426	-	BC065524 BC034382 AK055356 TSC_hg19_v1_chr2_-_230933641 NM_152527	60579	-	AL832300 BC012447 AK026488 AF280094 AF280095 BC019059 NM_004509 NM_004510 NM_080424 TSC_hg19_v1_chr2_-_231084830	211628	-	AK301097 NM_001185015	217356	-	BC017869|FBXO36|130888|F-box protein 36##BC022538|FBXO36|130888|F-box protein 36##NM_174899|FBXO36|130888|F-box protein 36##BC033935|FBXO36|130888|F-box protein 36##AK289655|FBXO36|130888|F-box protein 36##AK309702|FBXO36|130888|F-box protein 36##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12##BC065524|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##BC034382|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##AK055356|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##NM_152527|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##AL832300|SP110|3431|SP110 nuclear body protein##BC012447|SP110|3431|SP110 nuclear body protein##AK026488|SP110|3431|SP110 nuclear body protein##AF280094|SP110|3431|SP110 nuclear body protein##AF280095|SP110|3431|SP110 nuclear body protein##BC019059|SP110|3431|SP110 nuclear body protein##NM_004509|SP110|3431|SP110 nuclear body protein##NM_004510|SP110|3431|SP110 nuclear body protein##NM_080424|SP110|3431|SP110 nuclear body protein##AK301097|SP110|3431|SP110 nuclear body protein##NM_001185015|SP110|3431|SP110 nuclear body protein	0.987419	CTCF.p2:-10:0.987
chr1	148527267	148527404	reg1005662.p1	13.607	+	NM_001164261 NM_001164262	-324800	-	TSC_hg19_v1_chr1_-_148176396 BC110832	-350939	-	AL117237 NM_015383 BC094705	-501481	-	NM_001170755 AK097180	30892	+	NM_173638 BC023087	33582	+	NM_001102663 AK290302 AY894566	50081	+	NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##AL117237|NBPF14|25832|neuroblastoma breakpoint family, member 14##NM_015383|NBPF14|25832|neuroblastoma breakpoint family, member 14##BC094705|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15##AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_173638|NBPF15|284565|neuroblastoma breakpoint family, member 15##BC023087|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15	0.031854	
chr1	22743188	22743325	reg1005216.p1	13.606	+	AY009398 BT020125 AB590593 AB061675 AY358947 AF316543 NM_030761 BC057781	-273745	-	TSC_hg19_v1_chr1_+_22379812 AL121737	-363451	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	-364086	+	AK091019 AK095273 AX746732 NM_001083621 NM_014870 TSC_hg19_v1_chr1_+_22778343	35088	+	TSC_hg19_v1_chr1_+_22778350 AB007947 BC114607	35170	+	TSC_hg19_v1_chr1_+_22889990 BC072417 NM_001006943 NM_020526 BC038796 AB527136	146800	+	AY009398|WNT4|54361|wingless-type MMTV integration site family, member 4##BT020125|WNT4|54361|wingless-type MMTV integration site family, member 4##AB061675|WNT4|54361|wingless-type MMTV integration site family, member 4##AY358947|WNT4|54361|wingless-type MMTV integration site family, member 4##AF316543|WNT4|54361|wingless-type MMTV integration site family, member 4##NM_030761|WNT4|54361|wingless-type MMTV integration site family, member 4##BC057781|WNT4|54361|wingless-type MMTV integration site family, member 4##AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40##AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40##AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40##BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40##BC072417|EPHA8|2046|EPH receptor A8##NM_001006943|EPHA8|2046|EPH receptor A8##NM_020526|EPHA8|2046|EPH receptor A8##BC038796|EPHA8|2046|EPH receptor A8	0.960016	CTCF.p2:6:0.960
chr14	61736413	61736551	reg1005249.p1	13.606	+	TSC_hg19_v1_chr14_+_61447962 BX648332 BC110378 BC064429 BX248072 AF070578 AK303839	-288427	+	TSC_hg19_v1_chr14_+_61447932 BC050349	-288546	+	NM_001172702 NM_153811 AF543422 TSC_hg19_v1_chr14_+_61447920	-288605	+	AB464738 TSC_hg19_v1_chr14_-_61747887	11395	-	BC101726 BC113559 TSC_hg19_v1_chr14_-_61747937	11443	-	TSC_hg19_v1_chr14_-_61747957 AK091169 AX746825	11483	-	BX648332|SLC38A6|145389|solute carrier family 38, member 6##BC110378|SLC38A6|145389|solute carrier family 38, member 6##BC064429|SLC38A6|145389|solute carrier family 38, member 6##BX248072|SLC38A6|145389|solute carrier family 38, member 6##AF070578|SLC38A6|145389|solute carrier family 38, member 6##AK303839|SLC38A6|145389|solute carrier family 38, member 6##BC050349|SLC38A6|145389|solute carrier family 38, member 6##NM_001172702|SLC38A6|145389|solute carrier family 38, member 6##NM_153811|SLC38A6|145389|solute carrier family 38, member 6##AF543422|SLC38A6|145389|solute carrier family 38, member 6##BC101726|TMEM30B|161291|transmembrane protein 30B##BC113559|TMEM30B|161291|transmembrane protein 30B##AK091169|TMEM30B|161291|transmembrane protein 30B	0.991955	CTCF.p2:-7:0.992
chr7	122794424	122794553	reg1004929.p1	13.605	+	BC095524 NM_016945	-158735	-	TSC_hg19_v1_chr7_-_122526793 NM_001009571 NM_001167940 NM_017954	-267692	-	AY264289 TSC_hg19_v1_chr7_-_122526515 AF401638 BC054339 BC136601 BC144278 BC144279 AK098170 AK126518	-267990	-	AB528233 AK026413 AK314537 AF260824 BC111775 NM_022444	45523	-	BC091520 BC128181 BC128182 AK093153 AX747958 BC032838 BC068607 NM_178827	380156	-	CR933664 BT006695 TSC_hg19_v1_chr7_-_123197862 AK022209 BC020821 BC070236 BC070237 U64028 AK315458 U53468 BC000813 NM_005000	403402	-	BC095524|TAS2R16|50833|taste receptor, type 2, member 16##NM_016945|TAS2R16|50833|taste receptor, type 2, member 16##NM_001009571|CADPS2|93664|Ca++-dependent secretion activator 2##NM_001167940|CADPS2|93664|Ca++-dependent secretion activator 2##NM_017954|CADPS2|93664|Ca++-dependent secretion activator 2##AY264289|CADPS2|93664|Ca++-dependent secretion activator 2##AF401638|CADPS2|93664|Ca++-dependent secretion activator 2##BC054339|CADPS2|93664|Ca++-dependent secretion activator 2##BC136601|CADPS2|93664|Ca++-dependent secretion activator 2##BC144278|CADPS2|93664|Ca++-dependent secretion activator 2##BC144279|CADPS2|93664|Ca++-dependent secretion activator 2##AK126518|CADPS2|93664|Ca++-dependent secretion activator 2##AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##BC091520|IQUB|154865|IQ motif and ubiquitin domain containing##BC128181|IQUB|154865|IQ motif and ubiquitin domain containing##BC128182|IQUB|154865|IQ motif and ubiquitin domain containing##AK093153|IQUB|154865|IQ motif and ubiquitin domain containing##BC032838|IQUB|154865|IQ motif and ubiquitin domain containing##BC068607|IQUB|154865|IQ motif and ubiquitin domain containing##NM_178827|IQUB|154865|IQ motif and ubiquitin domain containing##CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	0.991231	CTCF.p2:15:0.991
chr1	152933273	152933386	reg1003457.p1	13.603	+	AK300492 AK301649 NM_005547	-52299	+	AK312020 BC014593 NM_030663 BC016744 X89960	-82521	+	DQ991251 NM_001128600	-118000	+	NM_173080 BC112170 BC112172 BC069445 BC069549	9804	+	BC105081 BC105083 BC143782 NM_001199828 NM_005987	23234	+	NM_001097589 NM_005416 AK309626 AK311823 BC017802 EF553525 AJ243667 AY118269	40905	+	AK300492|IVL|3713|involucrin##NM_005547|IVL|3713|involucrin##AK312020|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##BC014593|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##NM_030663|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##BC016744|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##X89960|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##DQ991251|LCE6A|448835|late cornified envelope 6A##NM_001128600|LCE6A|448835|late cornified envelope 6A##NM_173080|SPRR4|163778|small proline-rich protein 4##BC112170|SPRR4|163778|small proline-rich protein 4##BC112172|SPRR4|163778|small proline-rich protein 4##BC069445|SPRR4|163778|small proline-rich protein 4##BC069549|SPRR4|163778|small proline-rich protein 4##BC105081|SPRR1A|6698|small proline-rich protein 1A##BC105083|SPRR1A|6698|small proline-rich protein 1A##NM_001199828|SPRR1A|6698|small proline-rich protein 1A##NM_005987|SPRR1A|6698|small proline-rich protein 1A##NM_001097589|SPRR3|6707|small proline-rich protein 3##NM_005416|SPRR3|6707|small proline-rich protein 3##AK311823|SPRR3|6707|small proline-rich protein 3##BC017802|SPRR3|6707|small proline-rich protein 3##EF553525|SPRR3|6707|small proline-rich protein 3##AJ243667|SPRR3|6707|small proline-rich protein 3##AY118269|SPRR3|6707|small proline-rich protein 3	0.518155	CTCF.p2:-5:0.518
chr11	57409097	57409221	reg1004212.p2	13.603	+	TSC_hg19_v1_chr11_+_57365695 GU727623 NM_001032295 BC011171 AB590526 AY732485 AY732486 BT006966 DQ891799 DQ894982	-43487	+	NM_000062 TSC_hg19_v1_chr11_+_57365157 AK303809 AK312626 AK293054 AK303840 AB209826 M13656 M13690	-44042	+	AK093462 TSC_hg19_v1_chr11_-_57335794 NM_198183	-73380	-	TSC_hg19_v1_chr11_-_57414981 BC111012	5854	-	BC029228 BC104781 BC112119 BC064995 AB098738 AK054775 AK124577 NM_145008	8172	-	NM_001142597 NM_006831 TSC_hg19_v1_chr11_+_57425244 AK313007 AK300232 BC000446	16071	+	GU727623|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##NM_001032295|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##BC011171|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AY732485|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AY732486|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##BT006966|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##DQ891799|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##DQ894982|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##NM_000062|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK303809|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK312626|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK293054|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK303840|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AB209826|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##M13656|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##M13690|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK093462|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##NM_198183|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##BC111012|YPEL4|219539|yippee-like 4 (Drosophila)##BC029228|YPEL4|219539|yippee-like 4 (Drosophila)##BC104781|YPEL4|219539|yippee-like 4 (Drosophila)##BC112119|YPEL4|219539|yippee-like 4 (Drosophila)##BC064995|YPEL4|219539|yippee-like 4 (Drosophila)##AB098738|YPEL4|219539|yippee-like 4 (Drosophila)##AK054775|YPEL4|219539|yippee-like 4 (Drosophila)##AK124577|YPEL4|219539|yippee-like 4 (Drosophila)##NM_145008|YPEL4|219539|yippee-like 4 (Drosophila)##NM_001142597|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##NM_006831|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##AK313007|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##AK300232|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##BC000446|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	0.989706	CTCF.p2:12:0.990
chr20	25159936	25160055	reg1004591.p1	13.603	+	BC126228 BC136497 AF251033 AF251034 DQ854807 DQ854808 DQ854809 DQ854810 DQ854811 DQ854812 NM_014588 NM_199425	-97234	-	AL832939 BC114612 AK314440 TSC_hg19_v1_chr20_-_25038780 BC044588 BC055008 AK127566 BC039261 NM_001252675 NM_001252677 NM_032501	-121316	-	AK125058 AK296306 NM_001252676	-146671	-	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	16375	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	16485	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	68763	+	BC126228|VSX1|30813|visual system homeobox 1##BC136497|VSX1|30813|visual system homeobox 1##AF251033|VSX1|30813|visual system homeobox 1##AF251034|VSX1|30813|visual system homeobox 1##DQ854807|VSX1|30813|visual system homeobox 1##DQ854808|VSX1|30813|visual system homeobox 1##DQ854809|VSX1|30813|visual system homeobox 1##DQ854810|VSX1|30813|visual system homeobox 1##DQ854811|VSX1|30813|visual system homeobox 1##DQ854812|VSX1|30813|visual system homeobox 1##NM_014588|VSX1|30813|visual system homeobox 1##NM_199425|VSX1|30813|visual system homeobox 1##AL832939|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC114612|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK314440|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC044588|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC055008|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK127566|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC039261|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252675|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252677|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_032501|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK125058|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK296306|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252676|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain	0.0	
chr8	58136089	58136194	reg1002979.p1	13.602	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-229715	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-229739	-	TSC_hg19_v1_chr8_-_57906381 BC017797	-229763	-	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	771016	+	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	1187744	+	X56088 M93133 BC101777 BC112184 NM_000780	1276566	-	AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	0.0	
chr10	103362630	103362791	reg1002455.p2	13.601	+	TSC_hg19_v1_chr10_+_103348081 BC031695 BC001082 NM_015448 AK290154 AB527777 EU832466 EU832547 AY532267	-14640	+	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	-14701	-	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	-14781	-	AK314735 TSC_hg19_v1_chr10_-_103454693 NM_022039	92004	-	TSC_hg19_v1_chr10_-_103454921 AF281859	92252	-	AB014615 U36223 U46211 U46212 U46213 U56978 BC069106 BC128235 BC128236 NM_006119 NM_033163 NM_033164 NM_033165	172997	-	BC031695|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##BC001082|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##NM_015448|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AK290154|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832466|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832547|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AY532267|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK314735|FBXW4|6468|F-box and WD repeat domain containing 4##NM_022039|FBXW4|6468|F-box and WD repeat domain containing 4##AF281859|FBXW4|6468|F-box and WD repeat domain containing 4##AB014615|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U36223|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46211|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46212|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46213|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U56978|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC069106|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC128235|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC128236|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_006119|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033163|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033164|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033165|FGF8|2253|fibroblast growth factor 8 (androgen-induced)	0.0	
chr11	58939021	58939135	reg1002198.p1	13.601	+	NM_022074 NM_198847 AK291453 BC071759 AK092061 AX747338	-26799	+	TSC_hg19_v1_chr11_+_58910331 AK092237 AX747422 NM_001142519 NM_001142520 NM_001142521	-28768	+	TSC_hg19_v1_chr11_-_58910222 AK124475 BC028022	-28835	-	TSC_hg19_v1_chr11_+_58939648 NM_015177	607	+	TSC_hg19_v1_chr11_+_58940008 AB023154 AB385405	951	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	41329	-	NM_022074|FAM111A|63901|family with sequence similarity 111, member A##NM_198847|FAM111A|63901|family with sequence similarity 111, member A##AK291453|FAM111A|63901|family with sequence similarity 111, member A##BC071759|FAM111A|63901|family with sequence similarity 111, member A##AK092061|FAM111A|63901|family with sequence similarity 111, member A##AK092237|FAM111A|63901|family with sequence similarity 111, member A##NM_001142519|FAM111A|63901|family with sequence similarity 111, member A##NM_001142520|FAM111A|63901|family with sequence similarity 111, member A##NM_001142521|FAM111A|63901|family with sequence similarity 111, member A##NM_015177|DTX4|23220|deltex homolog 4 (Drosophila)##AB023154|DTX4|23220|deltex homolog 4 (Drosophila)##BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1	0.959069	CTCF.p2:-5:0.959
chr19	41312892	41313009	reg1003546.p1	13.600	+	NM_053046 BC036051 AK098182	-7559	+	TSC_hg19_v1_chr19_+_41305105 AK074408 BC001723	-7827	+	TSC_hg19_v1_chr19_+_41305091 NM_080732 AL832506	-7884	+	X13929 X13897 AF182275 M33318 X13930 BC096253 BC096254 BC096255 BC096256 AK309594 TSC_hg19_v1_chr19_-_41356353 AK307740 AK312964 NM_000762	43324	-	NM_000764 NM_030589	75706	-	AK307933 AK310944 TSC_hg19_v1_chr19_+_41430151 BC041174 M29873 DQ198366 DQ198367	117200	+	NM_053046|EGLN2|112398|egl nine homolog 2 (C. elegans)##BC036051|EGLN2|112398|egl nine homolog 2 (C. elegans)##AK098182|EGLN2|112398|egl nine homolog 2 (C. elegans)##AK074408|EGLN2|112398|egl nine homolog 2 (C. elegans)##BC001723|EGLN2|112398|egl nine homolog 2 (C. elegans)##NM_080732|EGLN2|112398|egl nine homolog 2 (C. elegans)##AL832506|EGLN2|112398|egl nine homolog 2 (C. elegans)##X13929|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##X13897|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AF182275|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##M33318|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096253|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096254|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096255|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096256|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK309594|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK307740|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK312964|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##NM_000762|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##NM_000764|CYP2A7|1549|cytochrome P450, family 2, subfamily A, polypeptide 7##NM_030589|CYP2A7|1549|cytochrome P450, family 2, subfamily A, polypeptide 7##AK307933|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##AK310944|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##BC041174|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##M29873|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##DQ198366|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##DQ198367|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	0.362491	CTCF.p2:14:0.362
chr8	144614377	144614512	reg1005532.p1	13.600	+	NM_201589	-101843	-	TSC_hg19_v1_chr8_+_144451016 NM_052924 BC012135 BC025767 AB528055 AY082588 CU693058 AB067516	-163354	+	AF349017 NM_052963 TSC_hg19_v1_chr8_-_144417051	-197389	-	D63484 TSC_hg19_v1_chr8_-_144623602 BC038670	9147	-	TSC_hg19_v1_chr8_-_144623640 NM_015117	9188	-	AK291817 NM_001166237	21112	+	NM_201589|MAFA|389692|v-maf musculoaponeurotic fibrosarcoma oncogene homolog A (avian)##NM_052924|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC012135|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC025767|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AY082588|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AB067516|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AF349017|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_052963|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##D63484|ZC3H3|23144|zinc finger CCCH-type containing 3##BC038670|ZC3H3|23144|zinc finger CCCH-type containing 3##NM_015117|ZC3H3|23144|zinc finger CCCH-type containing 3##AK291817|GSDMD|79792|gasdermin D##NM_001166237|GSDMD|79792|gasdermin D	0.987778	CTCF.p2:5:0.988
chr12	1900403	1900519	reg1003716.p1	13.599	+	TSC_hg19_v1_chr12_+_1800235 AK128511 AK127111 BC051858 NM_024551	-100244	+	AK127196 TSC_hg19_v1_chr12_+_1800187	-100295	+	BC001749 NM_032642	-162050	+	BC048288 TSC_hg19_v1_chr12_-_1920907 AK301234	20463	-	NM_001039029 NM_001163925 NM_001163926	28971	+	TSC_hg19_v1_chr12_+_1929658 AK125402 AK095610 BC146894 BC146910 AK124687	29298	+	AK128511|ADIPOR2|79602|adiponectin receptor 2##BC051858|ADIPOR2|79602|adiponectin receptor 2##NM_024551|ADIPOR2|79602|adiponectin receptor 2##AK127196|ADIPOR2|79602|adiponectin receptor 2##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC048288|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##AK301234|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##NM_001039029|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##NM_001163925|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##NM_001163926|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK125402|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK095610|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##BC146894|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##BC146910|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK124687|LRTM2|654429|leucine-rich repeats and transmembrane domains 2	0.985059	CTCF.p2:11:0.985
chr16	89859639	89859760	reg1005014.p1	13.599	+	TSC_hg19_v1_chr16_-_89831446 AK301168	-28245	-	NM_001113525 AK026482	-71734	+	TSC_hg19_v1_chr16_+_89787441 NM_152287 AK056405 BC105959 BC107603 BC111408	-72224	+	BT007366 TSC_hg19_v1_chr16_-_89883059 AK299282 X99226 BC022498 BC008979 BC120979 BC127633 BC064540 BC120978 BC141971 BC141972 NM_000135 NM_001018112	23346	-	TSC_hg19_v1_chr16_+_89894882 BC111030 NM_032451 AJ422077 BC011119	35206	+	TSC_hg19_v1_chr16_+_89940003 NM_014972 AK301053	80304	+	AK301168|FANCA|2175|Fanconi anemia, complementation group A##NM_001113525|ZNF276|92822|zinc finger protein 276##AK026482|ZNF276|92822|zinc finger protein 276##NM_152287|ZNF276|92822|zinc finger protein 276##AK056405|ZNF276|92822|zinc finger protein 276##BC105959|ZNF276|92822|zinc finger protein 276##BC107603|ZNF276|92822|zinc finger protein 276##BC111408|ZNF276|92822|zinc finger protein 276##BT007366|FANCA|2175|Fanconi anemia, complementation group A##AK299282|FANCA|2175|Fanconi anemia, complementation group A##X99226|FANCA|2175|Fanconi anemia, complementation group A##BC022498|FANCA|2175|Fanconi anemia, complementation group A##BC008979|FANCA|2175|Fanconi anemia, complementation group A##BC120979|FANCA|2175|Fanconi anemia, complementation group A##BC127633|FANCA|2175|Fanconi anemia, complementation group A##BC064540|FANCA|2175|Fanconi anemia, complementation group A##BC120978|FANCA|2175|Fanconi anemia, complementation group A##BC141971|FANCA|2175|Fanconi anemia, complementation group A##BC141972|FANCA|2175|Fanconi anemia, complementation group A##NM_000135|FANCA|2175|Fanconi anemia, complementation group A##NM_001018112|FANCA|2175|Fanconi anemia, complementation group A##BC111030|SPIRE2|84501|spire homolog 2 (Drosophila)##NM_032451|SPIRE2|84501|spire homolog 2 (Drosophila)##AJ422077|SPIRE2|84501|spire homolog 2 (Drosophila)##BC011119|SPIRE2|84501|spire homolog 2 (Drosophila)##NM_014972|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##AK301053|TCF25|22980|transcription factor 25 (basic helix-loop-helix)	0.830069	CTCF.p2:7:0.830
chr17	41561036	41561174	reg1004835.p1	13.597	+	TSC_hg19_v1_chr17_+_41476360 NM_001661 AK314951 BC000043 AB060692 L38490	-84738	+	AL832479 TSC_hg19_v1_chr17_-_41465694 AK123585 AK311685	-95415	-	TSC_hg19_v1_chr17_+_41363905 AK056132 AK290387 AK299974 AK301571 NM_145041	-197226	+	AK294046 TSC_hg19_v1_chr17_+_41561351 BC020697 AK303319 D50487 NM_004941 AK291664	192	+	TSC_hg19_v1_chr17_+_41561383 BC047327 BC044586 AB384688 CU692214	290	+	D12765 TSC_hg19_v1_chr17_-_41622738 DQ396626	61635	-	NM_001661|ARL4D|379|ADP-ribosylation factor-like 4D##AK314951|ARL4D|379|ADP-ribosylation factor-like 4D##BC000043|ARL4D|379|ADP-ribosylation factor-like 4D##AB060692|ARL4D|379|ADP-ribosylation factor-like 4D##L38490|ARL4D|379|ADP-ribosylation factor-like 4D##AL832479|LOC100130581|100130581|uncharacterized LOC100130581##AK123585|LOC100130581|100130581|uncharacterized LOC100130581##AK311685|LOC100130581|100130581|uncharacterized LOC100130581##AK056132|TMEM106A|113277|transmembrane protein 106A##AK290387|TMEM106A|113277|transmembrane protein 106A##AK299974|TMEM106A|113277|transmembrane protein 106A##AK301571|TMEM106A|113277|transmembrane protein 106A##NM_145041|TMEM106A|113277|transmembrane protein 106A##AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC047327|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC044586|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##D12765|ETV4|2118|ets variant 4##DQ396626|ETV4|2118|ets variant 4	1.346241	CTCF.p2:0:0.378	CTCF.p2:74:0.968
chrX	118913795	118913929	reg1004267.p1	13.597	+	TSC_hg19_v1_chrX_+_118892553 NM_001105576	-21281	+	AY034177 AF403058 AF403059 AF403060 AF403061 AF403062 AY679521 NM_015129 NM_145799 NM_145800 NM_145802 TSC_hg19_v1_chrX_-_118827360 AK290977	-86511	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	-86683	-	U57846 AK098280 BC001019 D79205 TSC_hg19_v1_chrX_-_118925592 BC070205 D28397 NM_001000	11722	-	TSC_hg19_v1_chrX_-_118986969 AF318576 AK093728 AX748280 BC121017 BC121018 AY013251 BC008494 NM_023010 NM_080632	73089	-	AB464688 BT007175 CU676558 BC000832 TSC_hg19_v1_chrX_-_119005683 BC128440 BC020556 AK314778 X98253 NM_006978	91820	-	NM_001105576|ANKRD58|347454|ankyrin repeat domain 58##AY034177|SEPT6|23157|septin 6##AF403058|SEPT6|23157|septin 6##AF403059|SEPT6|23157|septin 6##AF403060|SEPT6|23157|septin 6##AF403061|SEPT6|23157|septin 6##AF403062|SEPT6|23157|septin 6##AY679521|SEPT6|23157|septin 6##NM_015129|SEPT6|23157|septin 6##NM_145799|SEPT6|23157|septin 6##NM_145800|SEPT6|23157|septin 6##NM_145802|SEPT6|23157|septin 6##AK290977|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6##U57846|RPL39|6170|ribosomal protein L39##BC001019|RPL39|6170|ribosomal protein L39##D79205|RPL39|6170|ribosomal protein L39##BC070205|RPL39|6170|ribosomal protein L39##D28397|RPL39|6170|ribosomal protein L39##NM_001000|RPL39|6170|ribosomal protein L39##AF318576|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##AK093728|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC121017|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC121018|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##AY013251|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC008494|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##NM_023010|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##NM_080632|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BT007175|RNF113A|7737|ring finger protein 113A##BC000832|RNF113A|7737|ring finger protein 113A##BC020556|RNF113A|7737|ring finger protein 113A##AK314778|RNF113A|7737|ring finger protein 113A##X98253|RNF113A|7737|ring finger protein 113A##NM_006978|RNF113A|7737|ring finger protein 113A	0.0	
chr11	62192318	62192433	reg1003763.p1	13.595	+	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	-5839	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	-87427	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	-87550	+	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	121861	-	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	121939	-	DQ185040 BT006677 CR407625 BC006509 BC006520 CU674184 CU677463 CU680700 BC000384 DQ891103 DQ894284 Z11531 AB527934 BC009865 BC015813 BC018857 BC018853 BC028179 TSC_hg19_v1_chr11_-_62341334 BC013918 AK092787 AK299876 AY542307 BC067738 AK129569 AK129618 AK300729 X63526 AK130026 AK300686 BC031012	148949	-	AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein##DQ185040|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BT006677|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##CR407625|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006509|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006520|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC000384|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ891103|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ894284|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##Z11531|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC009865|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC015813|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018857|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018853|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC028179|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC013918|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK092787|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK299876|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AY542307|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC067738|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129569|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129618|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300729|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##X63526|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK130026|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300686|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC031012|EEF1G|1937|eukaryotic translation elongation factor 1 gamma	1.291003	CTCF.p2:-5:1.000	CTCF.p2:-106:0.291
chr16	47071806	47071921	reg1003673.p2	13.595	+	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	-64268	-	CU677459 AF011793 AJ001309 TSC_hg19_v1_chr16_-_47007561	-64341	-	TSC_hg19_v1_chr16_-_47005340 Y13350	-66515	-	AY358718 BC108727 TSC_hg19_v1_chr16_-_47177852 BC098380	105983	-	TSC_hg19_v1_chr16_-_47177902 AK074937 NM_001201477 NM_018092	106059	-	TSC_hg19_v1_chr16_-_47494975 BC006321 DQ893514 DQ896493 AF503339 AK027596	423002	-	AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AJ001309|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AY358718|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC108727|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC098380|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##AK074937|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_001201477|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_018092|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC006321|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ893514|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ896493|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF503339|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK027596|ITFG1|81533|integrin alpha FG-GAP repeat containing 1	0.948254	CTCF.p2:-6:0.948
chr10	88159673	88159816	reg1004942.p1	13.594	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	-33481	-	TSC_hg19_v1_chr10_+_86184685 AK294321	-1975049	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-2028126	+	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	121750	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	121786	-	DQ426884 NM_001030015 NM_033282 BC029291 BC113558 BC143688	254650	+	AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_001030015|OPN4|94233|opsin 4##NM_033282|OPN4|94233|opsin 4##BC029291|OPN4|94233|opsin 4##BC113558|OPN4|94233|opsin 4##BC143688|OPN4|94233|opsin 4	0.805975	CTCF.p2:-10:0.806
chr19	3821998	3822124	reg1003408.p1	13.594	+	AK055395 NM_002378	-20252	-	TSC_hg19_v1_chr19_-_3786423 BC000114 BC003109 NM_139354 NM_139355	-35650	-	L18974 TSC_hg19_v1_chr19_-_3786289 AL137754 AK315646 AB593100	-35764	-	AL365406 TSC_hg19_v1_chr19_-_3869037 AK295037 NM_001145640 NM_015174 BC034005	46978	-	NM_033064 TSC_hg19_v1_chr19_+_3880650	58574	+	TSC_hg19_v1_chr19_+_3880670 AB058775	58604	+	AK055395|MATK|4145|megakaryocyte-associated tyrosine kinase##NM_002378|MATK|4145|megakaryocyte-associated tyrosine kinase##BC000114|MATK|4145|megakaryocyte-associated tyrosine kinase##BC003109|MATK|4145|megakaryocyte-associated tyrosine kinase##NM_139354|MATK|4145|megakaryocyte-associated tyrosine kinase##NM_139355|MATK|4145|megakaryocyte-associated tyrosine kinase##L18974|MATK|4145|megakaryocyte-associated tyrosine kinase##AL137754|MATK|4145|megakaryocyte-associated tyrosine kinase##AK315646|MATK|4145|megakaryocyte-associated tyrosine kinase##AB593100|MATK|4145|megakaryocyte-associated tyrosine kinase##AL365406|ZFR2|23217|zinc finger RNA binding protein 2##AK295037|ZFR2|23217|zinc finger RNA binding protein 2##NM_001145640|ZFR2|23217|zinc finger RNA binding protein 2##NM_015174|ZFR2|23217|zinc finger RNA binding protein 2##BC034005|ZFR2|23217|zinc finger RNA binding protein 2##NM_033064|ATCAY|85300|ataxia, cerebellar, Cayman type##AB058775|ATCAY|85300|ataxia, cerebellar, Cayman type	0.989522	CTCF.p2:5:0.990
chr9	108604445	108604591	reg1005682.p1	13.594	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-147600	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	-147665	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	-179761	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	1020846	+	TSC_hg19_v1_chr9_+_109686439 CR749850	1081951	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	1441014	+	AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##CR749850|ZNF462|58499|zinc finger protein 462##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.99245	CTCF.p2:-5:0.992
chr2	43456775	43456896	reg1003744.p2	13.593	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-3093	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-3105	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-3490	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	366313	-	TSC_hg19_v1_chr2_+_43864411 BC063310	407578	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	407604	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.997699	CTCF.p2:10:0.998
chr13	29370940	29371039	reg1003914.p1	13.592	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	-77934	-	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	-137695	+	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	-137781	+	BC150245 AB018317 NM_001033602 AB384524	227786	+	BC032481 NM_015233 AK293970 BC119654 BC119655 BC129985	631821	+	AK301633 TSC_hg19_v1_chr13_+_30070532	699518	+	BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##BC150245|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AB018317|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_001033602|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK301633|MTUS2|23281|microtubule associated tumor suppressor candidate 2	0.998038	CTCF.p2:-11:0.998
chr3	115411849	115411978	reg1003929.p1	13.592	+	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-69494	+	NM_001130064 NM_002045	-69763	+	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	-545799	-	AK315286 TSC_hg19_v1_chr3_-_116164338	752418	-	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	752460	-	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	3341620	-	AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43##BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315286|LSAMP|4045|limbic system-associated membrane protein##BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11	0.995977	CTCF.p2:25:0.996
chr5	40688359	40688490	reg1004513.p1	13.592	+	TSC_hg19_v1_chr5_+_40680042 L25124	-8380	+	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	-8397	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-1263107	-	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	67616	-	AF100763 CU691476 TSC_hg19_v1_chr5_-_40798280 BC012622 AK312947 AK307546 BC037303 AB022017 CU690594 NM_006251 NM_206907	109855	-	BC048980 TSC_hg19_v1_chr5_-_40798478	110078	-	L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33##AF100763|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##BC012622|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##AK312947|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##AK307546|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##BC037303|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##AB022017|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##NM_006251|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##NM_206907|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##BC048980|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	0.986052	CTCF.p2:12:0.986
chr20	9388848	9388976	reg1004753.p1	13.590	+	NM_000933 AB384821	-100459	+	NM_182797 BC117458 BC143868	-190854	+	AK307482 TSC_hg19_v1_chr20_+_9049806	-339114	+	TSC_hg19_v1_chr20_+_9458460 AK057634	69601	+	TSC_hg19_v1_chr20_+_9494997 AK295336 AK316114 NM_001199897 NM_012261	106087	+	AL121740 BC050727 TSC_hg19_v1_chr20_+_9495326	106400	+	NM_000933|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##AK057634|PLCB4|5332|phospholipase C, beta 4##AK295336|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AK316114|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_001199897|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_012261|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AL121740|LAMP5|24141|lysosomal-associated membrane protein family, member 5##BC050727|LAMP5|24141|lysosomal-associated membrane protein family, member 5	0.979484	CTCF.p2:-6:0.979
chr10	121447653	121447767	reg1003572.p1	13.589	+	TSC_hg19_v1_chr10_+_121411086 BC001445 AK291333 BC014656 DQ893416 DQ896772 CU675397 AB385565	-36574	+	TSC_hg19_v1_chr10_+_121411079 BC107786	-36635	+	TSC_hg19_v1_chr10_+_121411053 AL137582	-36657	+	TSC_hg19_v1_chr10_+_121485568 NM_001243195 NM_014937 AK307758	37828	+	TSC_hg19_v1_chr10_+_121485596 BC067820 AB023183	37904	+	TSC_hg19_v1_chr10_+_121485653 BC111493 BC052367 BC082755 AB385409	37995	+	AK291333|BAG3|9531|BCL2-associated athanogene 3##BC014656|BAG3|9531|BCL2-associated athanogene 3##DQ893416|BAG3|9531|BCL2-associated athanogene 3##DQ896772|BAG3|9531|BCL2-associated athanogene 3##BC107786|BAG3|9531|BCL2-associated athanogene 3##AL137582|BAG3|9531|BCL2-associated athanogene 3##NM_001243195|INPP5F|22876|inositol polyphosphate-5-phosphatase F##NM_014937|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK307758|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC067820|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AB023183|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC111493|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC052367|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC082755|INPP5F|22876|inositol polyphosphate-5-phosphatase F	0.185389	
chr15	45906539	45906675	reg1004176.p1	13.589	+	TSC_hg19_v1_chr15_+_45879759 AK128626	-26834	+	TSC_hg19_v1_chr15_+_45879576 AK057545 BC004819 AK315581 AB527698	-27000	+	AF080470 NM_012388 TSC_hg19_v1_chr15_+_45879539 AK091740	-27121	+	TSC_hg19_v1_chr15_+_45927245 AK222463 AF042284 NM_021199 AF151802 AK313111 BC016836	20642	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	1569780	+	TSC_hg19_v1_chr15_+_48009541 AK290032	2102981	+	AK128626|PLDN|26258|pallidin homolog (mouse)##AK057545|PLDN|26258|pallidin homolog (mouse)##BC004819|PLDN|26258|pallidin homolog (mouse)##AK315581|PLDN|26258|pallidin homolog (mouse)##AF080470|PLDN|26258|pallidin homolog (mouse)##NM_012388|PLDN|26258|pallidin homolog (mouse)##AK222463|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF042284|SQRDL|58472|sulfide quinone reductase-like (yeast)##NM_021199|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF151802|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK313111|SQRDL|58472|sulfide quinone reductase-like (yeast)##BC016836|SQRDL|58472|sulfide quinone reductase-like (yeast)##AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	0.996437	CTCF.p2:9:0.996
chr7	98434542	98434664	reg1003500.p1	13.589	+	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	-187867	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-404170	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-404309	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	32927	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	33024	-	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	33073	-	NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130	0.970401	CTCF.p2:27:0.970
chr9	35116947	35117068	reg1004538.p1	13.589	+	TSC_hg19_v1_chr9_-_35115860 AK022837 AK021622 BC004406 NM_025182 AK307682	-1130	-	TSC_hg19_v1_chr9_-_35111546 AB040972	-5455	-	TSC_hg19_v1_chr9_-_35103148 AF190167 NM_013442	-13857	-	TSC_hg19_v1_chr9_+_35161986 NM_006377 AB209998 AK296836 AF020202	44995	+	TSC_hg19_v1_chr9_+_35162109 BC111781 BC111800	45102	+	TSC_hg19_v1_chr9_+_35489994 NM_014806	372990	+	AK022837|FAM214B|80256|family with sequence similarity 214, member B##AK021622|FAM214B|80256|family with sequence similarity 214, member B##BC004406|FAM214B|80256|family with sequence similarity 214, member B##NM_025182|FAM214B|80256|family with sequence similarity 214, member B##AK307682|FAM214B|80256|family with sequence similarity 214, member B##AB040972|FAM214B|80256|family with sequence similarity 214, member B##AF190167|STOML2|30968|stomatin (EPB72)-like 2##NM_013442|STOML2|30968|stomatin (EPB72)-like 2##NM_006377|UNC13B|10497|unc-13 homolog B (C. elegans)##AB209998|UNC13B|10497|unc-13 homolog B (C. elegans)##AK296836|UNC13B|10497|unc-13 homolog B (C. elegans)##AF020202|UNC13B|10497|unc-13 homolog B (C. elegans)##BC111781|UNC13B|10497|unc-13 homolog B (C. elegans)##BC111800|UNC13B|10497|unc-13 homolog B (C. elegans)##NM_014806|RUSC2|9853|RUN and SH3 domain containing 2	0.951532	CTCF.p2:-1:0.952
chr4	144695266	144695380	reg1004094.p1	13.588	+	NM_001168235	-73496	-	TSC_hg19_v1_chr4_+_144480613 AX721285 AX721289 BC025996	-214707	+	AB384709 TSC_hg19_v1_chr4_+_144435139	-260209	+	EU176664 BC064396 BC017864 M29610 NM_002102 NM_198682	131364	-	AY509882 AY509883 AY950609 AY950610 AY950611 AY950612 U05255 J02982 BC121077 BC121078 EU338223 EU338224 EU338225 EU338226 EU338227 EU338228 EU338229 EU338230 EU338235 EU338236 EU338237 EU338238 BC069310 X08055 NM_002100	245144	-	AY950614 DQ893046 L07251 L07253 S77893 U00177 U00178 U00179 X57023 M12857 M36281 X51798 BC013328 EU338231 EU338232 EU338233 EU338234 L31860 X08054 BC005319 AK290561 NM_002099	366522	-	NM_001168235|FREM3|166752|FRAS1 related extracellular matrix 3##BC025996|GUSBP5|441046|glucuronidase, beta pseudogene 5##EU176664|GYPE|2996|glycophorin E (MNS blood group)##BC064396|GYPE|2996|glycophorin E (MNS blood group)##BC017864|GYPE|2996|glycophorin E (MNS blood group)##M29610|GYPE|2996|glycophorin E (MNS blood group)##NM_002102|GYPE|2996|glycophorin E (MNS blood group)##NM_198682|GYPE|2996|glycophorin E (MNS blood group)##AY509882|GYPB|2994|glycophorin B (MNS blood group)##AY509883|GYPB|2994|glycophorin B (MNS blood group)##AY950609|GYPB|2994|glycophorin B (MNS blood group)##AY950610|GYPB|2994|glycophorin B (MNS blood group)##AY950611|GYPB|2994|glycophorin B (MNS blood group)##U05255|GYPB|2994|glycophorin B (MNS blood group)##J02982|GYPB|2994|glycophorin B (MNS blood group)##BC121077|GYPB|2994|glycophorin B (MNS blood group)##BC121078|GYPB|2994|glycophorin B (MNS blood group)##EU338223|GYPB|2994|glycophorin B (MNS blood group)##EU338224|GYPB|2994|glycophorin B (MNS blood group)##EU338225|GYPB|2994|glycophorin B (MNS blood group)##EU338226|GYPB|2994|glycophorin B (MNS blood group)##EU338227|GYPB|2994|glycophorin B (MNS blood group)##EU338228|GYPB|2994|glycophorin B (MNS blood group)##EU338229|GYPB|2994|glycophorin B (MNS blood group)##EU338230|GYPB|2994|glycophorin B (MNS blood group)##EU338235|GYPB|2994|glycophorin B (MNS blood group)##EU338236|GYPB|2994|glycophorin B (MNS blood group)##EU338237|GYPB|2994|glycophorin B (MNS blood group)##EU338238|GYPB|2994|glycophorin B (MNS blood group)##BC069310|GYPB|2994|glycophorin B (MNS blood group)##X08055|GYPB|2994|glycophorin B (MNS blood group)##NM_002100|GYPB|2994|glycophorin B (MNS blood group)##AY950614|GYPA|2993|glycophorin A (MNS blood group)##DQ893046|GYPA|2993|glycophorin A (MNS blood group)##L07251|GYPA|2993|glycophorin A (MNS blood group)##L07253|GYPA|2993|glycophorin A (MNS blood group)##U00177|GYPA|2993|glycophorin A (MNS blood group)##U00178|GYPA|2993|glycophorin A (MNS blood group)##U00179|GYPA|2993|glycophorin A (MNS blood group)##X57023|GYPA|2993|glycophorin A (MNS blood group)##M12857|GYPA|2993|glycophorin A (MNS blood group)##M36281|GYPA|2993|glycophorin A (MNS blood group)##X51798|GYPA|2993|glycophorin A (MNS blood group)##BC013328|GYPA|2993|glycophorin A (MNS blood group)##EU338231|GYPA|2993|glycophorin A (MNS blood group)##EU338232|GYPA|2993|glycophorin A (MNS blood group)##EU338233|GYPA|2993|glycophorin A (MNS blood group)##EU338234|GYPA|2993|glycophorin A (MNS blood group)##L31860|GYPA|2993|glycophorin A (MNS blood group)##X08054|GYPA|2993|glycophorin A (MNS blood group)##BC005319|GYPA|2993|glycophorin A (MNS blood group)##AK290561|GYPA|2993|glycophorin A (MNS blood group)##NM_002099|GYPA|2993|glycophorin A (MNS blood group)	0.87325	CTCF.p2:-6:0.873
chr5	132759607	132759746	reg1004371.p2	13.588	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-326785	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-331273	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-353573	+	TSC_hg19_v1_chr5_-_132948202 AK055684	188523	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	188562	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	544699	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.983701	CTCF.p2:7:0.984
chr13	99325399	99325520	reg1003525.p2	13.587	+	TSC_hg19_v1_chr13_-_99229363 BC035578 BC065378 NM_001032296	-96148	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	-96337	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	-96405	-	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	79446	-	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	304831	-	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	413232	-	BC035578|STK24|8428|serine/threonine kinase 24##BC065378|STK24|8428|serine/threonine kinase 24##NM_001032296|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9	0.998927	CTCF.p2:6:0.999
chr17	6817314	6817434	reg1003001.p1	13.586	+	AF357879 AK292818 AK304345 BC014599 NM_053285	-82341	-	NM_153230 BC034782	-137813	+	BC073156 TSC_hg19_v1_chr17_+_6659364 AK292710 AK292848 BC032776 BC058017 EF028165 EF028166 X99699	-157996	+	M62982 NM_000697 M35418 M58704 BC069557 AB590844	82033	+	NM_001004333	98361	+	AK289930 TSC_hg19_v1_chr17_+_6915955 BC036317 BC051802 BC062705 BC095436 AM746459	98586	+	AF357879|TEKT1|83659|tektin 1##AK292818|TEKT1|83659|tektin 1##AK304345|TEKT1|83659|tektin 1##BC014599|TEKT1|83659|tektin 1##NM_053285|TEKT1|83659|tektin 1##NM_153230|FBXO39|162517|F-box protein 39##BC034782|FBXO39|162517|F-box protein 39##BC073156|XAF1|54739|XIAP associated factor 1##AK292710|XAF1|54739|XIAP associated factor 1##AK292848|XAF1|54739|XIAP associated factor 1##BC032776|XAF1|54739|XIAP associated factor 1##BC058017|XAF1|54739|XIAP associated factor 1##EF028165|XAF1|54739|XIAP associated factor 1##EF028166|XAF1|54739|XIAP associated factor 1##X99699|XAF1|54739|XIAP associated factor 1##M62982|ALOX12|239|arachidonate 12-lipoxygenase##NM_000697|ALOX12|239|arachidonate 12-lipoxygenase##M35418|ALOX12|239|arachidonate 12-lipoxygenase##M58704|ALOX12|239|arachidonate 12-lipoxygenase##BC069557|ALOX12|239|arachidonate 12-lipoxygenase##NM_001004333|RNASEK|440400|ribonuclease, RNase K##AK289930|RNASEK|440400|ribonuclease, RNase K##BC036317|RNASEK|440400|ribonuclease, RNase K##BC051802|RNASEK|440400|ribonuclease, RNase K##BC062705|RNASEK|440400|ribonuclease, RNase K##BC095436|RNASEK|440400|ribonuclease, RNase K##AM746459|RNASEK|440400|ribonuclease, RNase K	0.219062	CTCF.p2:-30:0.219
chr15	35736915	35737032	reg1004004.p1	13.585	+	NM_014106 TSC_hg19_v1_chr15_-_35280498	-456461	-	TSC_hg19_v1_chr15_-_35280489 BC071603 AK291438	-456519	-	AB384497 AK291615 BC127111 BC127112 TSC_hg19_v1_chr15_-_35261899 AB011132 AK315815 BX647820 EF553519 NM_014691	-475046	-	CU688170 TSC_hg19_v1_chr15_-_35838365 BC066652 AK094007 AL833427 AX748407 AK125017 NM_001141972 NM_080650	101413	-	TSC_hg19_v1_chr15_+_36871914 NM_001130010 AK026504 BC006254	1134926	+	NM_032499	1195832	+	NM_014106|ZNF770|54989|zinc finger protein 770##BC071603|ZNF770|54989|zinc finger protein 770##AK291438|ZNF770|54989|zinc finger protein 770##AK291615|AQR|9716|aquarius homolog (mouse)##BC127111|AQR|9716|aquarius homolog (mouse)##BC127112|AQR|9716|aquarius homolog (mouse)##AB011132|AQR|9716|aquarius homolog (mouse)##AK315815|AQR|9716|aquarius homolog (mouse)##BX647820|AQR|9716|aquarius homolog (mouse)##EF553519|AQR|9716|aquarius homolog (mouse)##NM_014691|AQR|9716|aquarius homolog (mouse)##BC066652|ATPBD4|89978|ATP binding domain 4##AK094007|ATPBD4|89978|ATP binding domain 4##AL833427|ATPBD4|89978|ATP binding domain 4##AK125017|ATPBD4|89978|ATP binding domain 4##NM_001141972|ATPBD4|89978|ATP binding domain 4##NM_080650|ATPBD4|89978|ATP binding domain 4##NM_001130010|C15orf41|84529|chromosome 15 open reading frame 41##AK026504|C15orf41|84529|chromosome 15 open reading frame 41##BC006254|C15orf41|84529|chromosome 15 open reading frame 41##NM_032499|C15orf41|84529|chromosome 15 open reading frame 41	0.574135	CTCF.p2:14:0.574
chr15	99322954	99323080	reg1003559.p2	13.585	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-130261	+	TSC_hg19_v1_chr15_+_99191767 AB425196	-131046	+	AK097062 AK097062 NM_182562	-265407	-	BC104743 BC104744 BC105686 NM_001102612	225820	-	AK058162 NM_001167902	228006	-	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	322223	+	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein	0.98486	CTCF.p2:-3:0.985
chr17	64251292	64251416	reg1003702.p1	13.585	+	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	-25829	-	BC131805 TSC_hg19_v1_chr17_-_64188195 BC037991 NM_145036 AK299075 AK096929 NM_001199165	-63173	-	BC029524 NM_001037325	-428694	-	TSC_hg19_v1_chr17_+_64298733 BC053321	47396	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	47573	+	AK290171 TSC_hg19_v1_chr17_+_64831234	579881	+	DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC131805|CEP112|201134|centrosomal protein 112kDa##BC037991|CEP112|201134|centrosomal protein 112kDa##NM_145036|CEP112|201134|centrosomal protein 112kDa##AK299075|CEP112|201134|centrosomal protein 112kDa##AK096929|CEP112|201134|centrosomal protein 112kDa##NM_001199165|CEP112|201134|centrosomal protein 112kDa##BC029524|CEP112|201134|centrosomal protein 112kDa##NM_001037325|CEP112|201134|centrosomal protein 112kDa##BC053321|PRKCA|5578|protein kinase C, alpha##NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5	0.968767	CTCF.p2:-9:0.969
chr11	79204721	79204842	reg1005081.p1	13.584	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-53057	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-918886	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-918989	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	3240117	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	3406736	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	3407993	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.957305	CTCF.p2:3:0.957
chr1	38455771	38455921	reg1004060.p2	13.584	+	AB464245 CU677944 DQ891120 EU176559 U08815 AK222554 AK301424 TSC_hg19_v1_chr1_-_38455660 AK291181 BC002395 AK292116 BC011523 NM_006802	-148	-	TSC_hg19_v1_chr1_-_38412726 NM_005540	-43117	-	TSC_hg19_v1_chr1_-_38412723 M74161	-43125	-	TSC_hg19_v1_chr1_-_38471187 BC014501 BC001351 BC011697 AK309179 AK290641 NM_001243878 NM_004468	15387	-	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	22539	+	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	22584	+	DQ891120|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##EU176559|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##U08815|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##AK222554|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##AK301424|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##AK291181|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##BC002395|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##AK292116|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##BC011523|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##NM_006802|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##NM_005540|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##M74161|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##BC014501|FHL3|2275|four and a half LIM domains 3##BC001351|FHL3|2275|four and a half LIM domains 3##BC011697|FHL3|2275|four and a half LIM domains 3##AK309179|FHL3|2275|four and a half LIM domains 3##AK290641|FHL3|2275|four and a half LIM domains 3##NM_001243878|FHL3|2275|four and a half LIM domains 3##NM_004468|FHL3|2275|four and a half LIM domains 3##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	1.720428	CTCF.p2:-8:0.999	CTCF.p2:43:0.721
chr9	139842575	139842710	reg1005526.p1	13.583	+	NM_000606 M17999 X06465 BC113624 BC113626 M17263 HQ258743 AB590759	-2909	+	BC014130 TSC_hg19_v1_chr9_-_139839140 BC035355 BC031100 NM_018998	-3506	-	BC014297 TSC_hg19_v1_chr9_-_139839082 AK315738	-3558	-	BC041168 NM_178536 AY301272	4131	+	TSC_hg19_v1_chr9_+_139871955 NM_000954 AK075333 M61900 AK312817	29319	+	TSC_hg19_v1_chr9_+_139872014 BC005939 AB464076 AY026356 BT019921 BT019922	29380	+	NM_000606|C8G|733|complement component 8, gamma polypeptide##M17999|C8G|733|complement component 8, gamma polypeptide##X06465|C8G|733|complement component 8, gamma polypeptide##BC113624|C8G|733|complement component 8, gamma polypeptide##BC113626|C8G|733|complement component 8, gamma polypeptide##M17263|C8G|733|complement component 8, gamma polypeptide##HQ258743|C8G|733|complement component 8, gamma polypeptide##BC014130|FBXW5|54461|F-box and WD repeat domain containing 5##BC035355|FBXW5|54461|F-box and WD repeat domain containing 5##BC031100|FBXW5|54461|F-box and WD repeat domain containing 5##NM_018998|FBXW5|54461|F-box and WD repeat domain containing 5##BC014297|FBXW5|54461|F-box and WD repeat domain containing 5##AK315738|FBXW5|54461|F-box and WD repeat domain containing 5##BC041168|LCN12|286256|lipocalin 12##NM_178536|LCN12|286256|lipocalin 12##AY301272|LCN12|286256|lipocalin 12##NM_000954|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##AK075333|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##M61900|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##AK312817|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##BC005939|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##AY026356|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##BT019921|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##BT019922|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)	0.0	
chr2	131678120	131678250	reg1005117.p1	13.582	+	AF249745 NM_015320 NM_032995	-3962	+	TSC_hg19_v1_chr2_+_131513793 NM_001105194 NM_001105195	-164363	+	AK289525 NM_152698 AK095696 AK291424 BC113445 BC113447 BC143806 NM_001105193	-165070	+	TSC_hg19_v1_chr2_-_131851008 BC066347 BC110642 NM_001009993	172813	-	AK126289 NM_001100623 NM_017958	184234	+	TSC_hg19_v1_chr2_+_131862874 AK302770	184686	+	AF249745|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##NM_015320|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##NM_032995|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##NM_001105194|FAM123C|205147|family with sequence similarity 123C##NM_001105195|FAM123C|205147|family with sequence similarity 123C##AK289525|FAM123C|205147|family with sequence similarity 123C##NM_152698|FAM123C|205147|family with sequence similarity 123C##AK095696|FAM123C|205147|family with sequence similarity 123C##AK291424|FAM123C|205147|family with sequence similarity 123C##BC113445|FAM123C|205147|family with sequence similarity 123C##BC113447|FAM123C|205147|family with sequence similarity 123C##BC143806|FAM123C|205147|family with sequence similarity 123C##NM_001105193|FAM123C|205147|family with sequence similarity 123C##BC066347|FAM168B|130074|family with sequence similarity 168, member B##BC110642|FAM168B|130074|family with sequence similarity 168, member B##NM_001009993|FAM168B|130074|family with sequence similarity 168, member B##AK126289|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_001100623|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_017958|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK302770|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2	0.988558	CTCF.p2:7:0.989
chr7	46392061	46392199	reg1005403.p1	13.582	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-431324	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-458996	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-464025	+	TSC_hg19_v1_chr7_-_47579207 BC071791	1187079	-	TSC_hg19_v1_chr7_-_47621681 CR749644	1229533	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	1229653	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.790118	CTCF.p2:25:0.790
chr9	100377886	100378014	reg1004401.p1	13.582	+	TSC_hg19_v1_chr9_+_100263947 BC002660 NM_003275	-114012	+	NM_001166116 AK314533	-114488	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	-203571	+	TSC_hg19_v1_chr9_-_100395642 AK094043 AK291199 AX748426 BC035604 BX648493 BX538308 AK128615	17679	-	NM_002486 AK312807 TSC_hg19_v1_chr9_+_100395897 D32002	17876	+	NM_139246	18011	-	BC002660|TMOD1|7111|tropomodulin 1##NM_003275|TMOD1|7111|tropomodulin 1##NM_001166116|TMOD1|7111|tropomodulin 1##AK314533|TMOD1|7111|tropomodulin 1##AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7##AK094043|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK291199|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BC035604|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX648493|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX538308|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK128615|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##NM_002486|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##AK312807|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##D32002|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##NM_139246|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2	0.997056	CTCF.p2:16:0.997
chr15	52274579	52274730	reg1005165.p1	13.581	+	TSC_hg19_v1_chr15_-_52263976 BC018147 NM_138792 AK055762 AK297972 AY302186	-10692	-	TSC_hg19_v1_chr15_+_52201590 AK025704	-73044	+	TSC_hg19_v1_chr15_+_52121876 BX647277 AF177171 BC020542	-152635	+	TSC_hg19_v1_chr15_+_52311425 NM_002748	36765	+	TSC_hg19_v1_chr15_+_52311432 CR749401	36780	+	TSC_hg19_v1_chr15_+_52311442 BC035492	36807	+	BC018147|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##NM_138792|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK055762|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK297972|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AY302186|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)##BX647277|TMOD3|29766|tropomodulin 3 (ubiquitous)##AF177171|TMOD3|29766|tropomodulin 3 (ubiquitous)##BC020542|TMOD3|29766|tropomodulin 3 (ubiquitous)##NM_002748|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##BC035492|MAPK6|5597|mitogen-activated protein kinase 6	0.818414	CTCF.p2:-15:0.818
chr7	35749207	35749335	reg1003972.p1	13.579	+	TSC_hg19_v1_chr7_-_35734795 NM_022373	-14493	-	BC020264 TSC_hg19_v1_chr7_-_35734751 AK055708	-14532	-	TSC_hg19_v1_chr7_-_35734533 BC005091	-14675	-	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	91439	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	91562	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	91581	+	NM_022373|HERPUD2|64224|HERPUD family member 2##BC020264|HERPUD2|64224|HERPUD family member 2##AK055708|HERPUD2|64224|HERPUD family member 2##BC005091|HERPUD2|64224|HERPUD family member 2##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7	0.028159	
chr5	75552189	75552332	reg1004007.p1	13.578	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-172989	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-539000	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	-543998	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	146856	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	366885	-	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	459696	+	AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor	0.444059	CTCF.p2:26:0.444
chr1	42612645	42612768	reg1005122.p1	13.577	+	TSC_hg19_v1_chr1_-_42501606 BC046120	-111077	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	-228333	-	TSC_hg19_v1_chr1_-_42384357 BC040942	-228364	-	NM_007102 U34279 BC093781 Z50753 BC093779 BC069301	6390	+	M95174 M97496 NM_033553	17684	-	TSC_hg19_v1_chr1_-_42776761 AB463045	164055	-	BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_007102|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##U34279|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC093781|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##Z50753|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC093779|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC069301|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##M95174|GUCA2A|2980|guanylate cyclase activator 2A (guanylin)##M97496|GUCA2A|2980|guanylate cyclase activator 2A (guanylin)##NM_033553|GUCA2A|2980|guanylate cyclase activator 2A (guanylin)	0.985945	CTCF.p2:4:0.986
chr16	30640176	30640323	reg1004018.p1	13.577	+	AK310459 AB065282 BC014000 NM_138447 TSC_hg19_v1_chr16_-_30621684	-18593	-	TSC_hg19_v1_chr16_-_30597103 AK309511 EU446576 AK292465 BC040642 AK298848 AK056692 NM_152458	-43274	-	NM_001024683 NM_145271	-56522	-	TSC_hg19_v1_chr16_+_30662098 CR936781 AK125716	21851	+	TSC_hg19_v1_chr16_+_30662286 BC010232 BC050677 NM_024031 BC011573 BC000119 AK074783	22016	+	NM_001105079	35528	+	AK310459|ZNF689|115509|zinc finger protein 689##AB065282|ZNF689|115509|zinc finger protein 689##BC014000|ZNF689|115509|zinc finger protein 689##NM_138447|ZNF689|115509|zinc finger protein 689##AK309511|ZNF785|146540|zinc finger protein 785##EU446576|ZNF785|146540|zinc finger protein 785##AK292465|ZNF785|146540|zinc finger protein 785##BC040642|ZNF785|146540|zinc finger protein 785##AK298848|ZNF785|146540|zinc finger protein 785##AK056692|ZNF785|146540|zinc finger protein 785##NM_152458|ZNF785|146540|zinc finger protein 785##NM_001024683|ZNF688|146542|zinc finger protein 688##NM_145271|ZNF688|146542|zinc finger protein 688##CR936781|PRR14|78994|proline rich 14##AK125716|PRR14|78994|proline rich 14##BC010232|PRR14|78994|proline rich 14##BC050677|PRR14|78994|proline rich 14##NM_024031|PRR14|78994|proline rich 14##BC011573|PRR14|78994|proline rich 14##BC000119|PRR14|78994|proline rich 14##AK074783|PRR14|78994|proline rich 14##NM_001105079|FBRS|64319|fibrosin	0.969959	CTCF.p2:11:0.970
chr1	205457361	205457490	reg1005633.p1	13.576	+	AB084764 AB084765 AB085610 AB096677 AB096678 AB096679 AB096680 AB096681 AB096682 BC036636 AK302392 NM_001001552 NM_001199050 NM_001199051 NM_001199052	-66229	-	AK299227 AK001610 NM_018203 AK096590	-131385	-	BC036076 TSC_hg19_v1_chr1_-_205313311	-144115	-	NM_002596 NM_212502 NM_212503 TSC_hg19_v1_chr1_+_205473688 AK293756 AK296320 AK295654	16280	+	AY353237 AY353240 TSC_hg19_v1_chr1_+_205473802 AY353238 BC011526 AY353239	16397	+	AK293816 NM_181644 TSC_hg19_v1_chr1_+_205538141	80702	+	AB084764|LEMD1|93273|LEM domain containing 1##AB084765|LEMD1|93273|LEM domain containing 1##AB085610|LEMD1|93273|LEM domain containing 1##AB096677|LEMD1|93273|LEM domain containing 1##AB096678|LEMD1|93273|LEM domain containing 1##AB096679|LEMD1|93273|LEM domain containing 1##AB096680|LEMD1|93273|LEM domain containing 1##AB096681|LEMD1|93273|LEM domain containing 1##AB096682|LEMD1|93273|LEM domain containing 1##BC036636|LEMD1|93273|LEM domain containing 1##AK302392|LEMD1|93273|LEM domain containing 1##NM_001001552|LEMD1|93273|LEM domain containing 1##NM_001199050|LEMD1|93273|LEM domain containing 1##NM_001199051|LEMD1|93273|LEM domain containing 1##NM_001199052|LEMD1|93273|LEM domain containing 1##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A##BC036076|KLHDC8A|55220|kelch domain containing 8A##NM_002596|CDK18|5129|cyclin-dependent kinase 18##NM_212502|CDK18|5129|cyclin-dependent kinase 18##NM_212503|CDK18|5129|cyclin-dependent kinase 18##AK293756|CDK18|5129|cyclin-dependent kinase 18##AK296320|CDK18|5129|cyclin-dependent kinase 18##AK295654|CDK18|5129|cyclin-dependent kinase 18##AY353237|CDK18|5129|cyclin-dependent kinase 18##AY353240|CDK18|5129|cyclin-dependent kinase 18##AY353238|CDK18|5129|cyclin-dependent kinase 18##BC011526|CDK18|5129|cyclin-dependent kinase 18##AY353239|CDK18|5129|cyclin-dependent kinase 18##AK293816|MFSD4|148808|major facilitator superfamily domain containing 4##NM_181644|MFSD4|148808|major facilitator superfamily domain containing 4	0.998623	CTCF.p2:-6:0.999
chr21	32977032	32977166	reg1004356.p1	13.576	+	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	-45741	-	AB096964 NM_001099219	-566305	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	-723241	-	TSC_hg19_v1_chr21_+_33032005 NM_000454 AK312116 BC001034 X02317 EF151142 AB464254 AY049787 AY450286 BT006676 CR450355 CR541742 CU674512 EF143990	54908	+	AB032998 AK025748 AL117417 TSC_hg19_v1_chr21_-_33074136	97019	-	AL834304 BC052286 BC064990 TSC_hg19_v1_chr21_-_33104271 AK057840 AK308406	127173	-	NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##NM_000454|SOD1|6647|superoxide dismutase 1, soluble##AK312116|SOD1|6647|superoxide dismutase 1, soluble##BC001034|SOD1|6647|superoxide dismutase 1, soluble##X02317|SOD1|6647|superoxide dismutase 1, soluble##EF151142|SOD1|6647|superoxide dismutase 1, soluble##AY049787|SOD1|6647|superoxide dismutase 1, soluble##AY450286|SOD1|6647|superoxide dismutase 1, soluble##BT006676|SOD1|6647|superoxide dismutase 1, soluble##CR450355|SOD1|6647|superoxide dismutase 1, soluble##CR541742|SOD1|6647|superoxide dismutase 1, soluble##EF143990|SOD1|6647|superoxide dismutase 1, soluble##AB032998|SCAF4|57466|SR-related CTD-associated factor 4##AK025748|SCAF4|57466|SR-related CTD-associated factor 4##AL117417|SCAF4|57466|SR-related CTD-associated factor 4##AL834304|SCAF4|57466|SR-related CTD-associated factor 4##BC052286|SCAF4|57466|SR-related CTD-associated factor 4##BC064990|SCAF4|57466|SR-related CTD-associated factor 4##AK057840|SCAF4|57466|SR-related CTD-associated factor 4##AK308406|SCAF4|57466|SR-related CTD-associated factor 4	0.999869	CTCF.p2:6:1.000
chr2	143980095	143980236	reg1004949.p1	13.576	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	-93174	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	-93235	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-344925	+	NM_024659	1014740	-	AY281366 NM_001006636	1071894	-	BC017741 AK291357 TSC_hg19_v1_chr2_-_145090037 BC061699	1109867	-	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1##AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1##BC017741|GTDC1|79712|glycosyltransferase-like domain containing 1##AK291357|GTDC1|79712|glycosyltransferase-like domain containing 1##BC061699|GTDC1|79712|glycosyltransferase-like domain containing 1	0.960672	CTCF.p2:20:0.961
chr14	104544432	104544563	reg1003707.p2	13.575	+	TSC_hg19_v1_chr14_+_104394792 NM_153046	-149714	+	AK310120 TSC_hg19_v1_chr14_-_104387867 AK309355 AK312099 AF054175 AK309499 DQ426862 NM_001127393 NM_004894	-156618	-	BX161388 TSC_hg19_v1_chr14_-_104387847 BC047289 BC063419 BC000429 BC001944	-156652	-	AX781433 BX247999 NM_001080464 AX721044 BC035836 BC136637 AX781428 AX781429 AX781430 AX781431 AX781435	7564	+	NM_015656	60562	+	TSC_hg19_v1_chr14_+_104605441 AB033062	60955	+	NM_153046|TDRD9|122402|tudor domain containing 9##AK310120|C14orf2|9556|chromosome 14 open reading frame 2##AK309355|C14orf2|9556|chromosome 14 open reading frame 2##AK312099|C14orf2|9556|chromosome 14 open reading frame 2##AF054175|C14orf2|9556|chromosome 14 open reading frame 2##AK309499|C14orf2|9556|chromosome 14 open reading frame 2##DQ426862|C14orf2|9556|chromosome 14 open reading frame 2##NM_001127393|C14orf2|9556|chromosome 14 open reading frame 2##NM_004894|C14orf2|9556|chromosome 14 open reading frame 2##BX161388|C14orf2|9556|chromosome 14 open reading frame 2##BC047289|C14orf2|9556|chromosome 14 open reading frame 2##BC063419|C14orf2|9556|chromosome 14 open reading frame 2##BC000429|C14orf2|9556|chromosome 14 open reading frame 2##BC001944|C14orf2|9556|chromosome 14 open reading frame 2##AX781433|ASPG|374569|asparaginase homolog (S. cerevisiae)##BX247999|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_001080464|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC035836|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC136637|ASPG|374569|asparaginase homolog (S. cerevisiae)##AX781435|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_015656|KIF26A|26153|kinesin family member 26A##AB033062|KIF26A|26153|kinesin family member 26A	1.463977	CTCF.p2:31:0.466	CTCF.p2:-37:0.998
chr2	113896096	113896222	reg1005394.p1	13.575	+	TSC_hg19_v1_chr2_+_113885174 AK290926 X52015 X53296 AB529162	-10955	+	NM_173842 TSC_hg19_v1_chr2_+_113885141	-11020	+	AF043143 NM_000577 NM_173841 NM_173843 M55646 AK290898 X84348 BC009745	-20642	+	AK290045 TSC_hg19_v1_chr2_+_113931556 AB208798 NM_012455	35395	+	TSC_hg19_v1_chr2_+_113931576 BC035307 BC073151	35422	+	TSC_hg19_v1_chr2_+_113993123 AK056052 AK307781 BX537688 AK056355 AK130275	97111	+	AK290926|IL1RN|3557|interleukin 1 receptor antagonist##X52015|IL1RN|3557|interleukin 1 receptor antagonist##X53296|IL1RN|3557|interleukin 1 receptor antagonist##NM_173842|IL1RN|3557|interleukin 1 receptor antagonist##AF043143|IL1RN|3557|interleukin 1 receptor antagonist##NM_000577|IL1RN|3557|interleukin 1 receptor antagonist##NM_173841|IL1RN|3557|interleukin 1 receptor antagonist##NM_173843|IL1RN|3557|interleukin 1 receptor antagonist##M55646|IL1RN|3557|interleukin 1 receptor antagonist##AK290898|IL1RN|3557|interleukin 1 receptor antagonist##X84348|IL1RN|3557|interleukin 1 receptor antagonist##BC009745|IL1RN|3557|interleukin 1 receptor antagonist##AK290045|PSD4|23550|pleckstrin and Sec7 domain containing 4##AB208798|PSD4|23550|pleckstrin and Sec7 domain containing 4##NM_012455|PSD4|23550|pleckstrin and Sec7 domain containing 4##BC035307|PSD4|23550|pleckstrin and Sec7 domain containing 4##BC073151|PSD4|23550|pleckstrin and Sec7 domain containing 4##AK056052|LOC654433|654433|uncharacterized LOC654433##AK307781|LOC654433|654433|uncharacterized LOC654433##BX537688|LOC654433|654433|uncharacterized LOC654433##AK056355|LOC654433|654433|uncharacterized LOC654433##AK130275|LOC654433|654433|uncharacterized LOC654433	0.987535	CTCF.p2:-5:0.988
chr3	197669967	197670101	reg1005732.p1	13.575	+	TSC_hg19_v1_chr3_+_197518134 AK300466 AK303521 BC007504 NM_032773 CU675675 DQ893268 DQ896598	-151895	+	TSC_hg19_v1_chr3_+_197518124 AK293745	-151937	+	TSC_hg19_v1_chr3_+_197477223 AK302546	-192793	+	BC068973 TSC_hg19_v1_chr3_-_197676768 AK027224 NM_001134435	6741	-	BC010949 TSC_hg19_v1_chr3_+_197677063 AY871273 NM_000996 AB055768 X52966 AK026542 BC001037 BC061890 BC017093	7042	+	BC016156 TSC_hg19_v1_chr3_-_197686873 AK095094 AL136889 NM_032263	16830	-	AK300466|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##AK303521|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##BC007504|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##NM_032773|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##DQ893268|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##DQ896598|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##AK293745|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##AK302546|FYTTD1|84248|forty-two-three domain containing 1##BC068973|IQCG|84223|IQ motif containing G##AK027224|IQCG|84223|IQ motif containing G##NM_001134435|IQCG|84223|IQ motif containing G##BC010949|RPL35A|6165|ribosomal protein L35a##AY871273|RPL35A|6165|ribosomal protein L35a##NM_000996|RPL35A|6165|ribosomal protein L35a##AB055768|RPL35A|6165|ribosomal protein L35a##X52966|RPL35A|6165|ribosomal protein L35a##AK026542|RPL35A|6165|ribosomal protein L35a##BC001037|RPL35A|6165|ribosomal protein L35a##BC061890|RPL35A|6165|ribosomal protein L35a##BC017093|RPL35A|6165|ribosomal protein L35a##BC016156|IQCG|84223|IQ motif containing G##AK095094|IQCG|84223|IQ motif containing G##AL136889|IQCG|84223|IQ motif containing G##NM_032263|IQCG|84223|IQ motif containing G	0.807099	CTCF.p2:1:0.807
chr19	7445561	7445690	reg1004810.p1	13.574	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	-151665	-	TSC_hg19_v1_chr19_-_7099547 AK127494	-346074	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-375910	+	TSC_hg19_v1_chr19_+_7460030 NM_015318	14382	+	TSC_hg19_v1_chr19_+_7460061 AB011093	14452	+	AK127045 NM_001130955	58948	+	BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.99977	CTCF.p2:13:1.000
chr2	187727713	187727858	reg1005226.p1	13.574	+	AK128006 BC031094 NM_182521	-13889	-	TSC_hg19_v1_chr2_+_187558788 AK091423 AK289737 AX746973 BC060872 NM_177454 AF361495 CU687488	-169009	+	AK302990 NM_001144999	-262854	+	DQ280491 U17473 L76380 AK291630 AK292998 DQ280490 NM_005795	585161	-	J03225 AF021834 TSC_hg19_v1_chr2_-_188419163 AK313562 BC015514 BC014332	691325	-	TSC_hg19_v1_chr2_-_188419185 NM_001032281 NM_006287	691416	-	AK128006|ZSWIM2|151112|zinc finger, SWIM-type containing 2##BC031094|ZSWIM2|151112|zinc finger, SWIM-type containing 2##NM_182521|ZSWIM2|151112|zinc finger, SWIM-type containing 2##AK091423|FAM171B|165215|family with sequence similarity 171, member B##AK289737|FAM171B|165215|family with sequence similarity 171, member B##BC060872|FAM171B|165215|family with sequence similarity 171, member B##NM_177454|FAM171B|165215|family with sequence similarity 171, member B##AF361495|FAM171B|165215|family with sequence similarity 171, member B##AK302990|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##NM_001144999|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##DQ280491|CALCRL|10203|calcitonin receptor-like##U17473|CALCRL|10203|calcitonin receptor-like##L76380|CALCRL|10203|calcitonin receptor-like##AK291630|CALCRL|10203|calcitonin receptor-like##AK292998|CALCRL|10203|calcitonin receptor-like##NM_005795|CALCRL|10203|calcitonin receptor-like##J03225|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AF021834|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK313562|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC015514|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC014332|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)	0.894257	CTCF.p2:-26:0.894
chr13	99918239	99918345	reg1002258.p1	13.573	+	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-7678	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-65173	+	TSC_hg19_v1_chr13_-_99852951 BC043515 AK097488	-65325	-	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	41406	-	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	235408	+	TSC_hg19_v1_chr13_+_100153777 BC130293	235490	+	AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.862493	CTCF.p2:24:0.862
chr16	67548385	67548520	reg1005275.p1	13.573	+	NM_001138 U88063	-30737	-	CU679153 DQ893270 DQ896601 X71490 TSC_hg19_v1_chr16_-_67515051 AK300570 AK313035 AK125522 BC008861 NM_004691	-33408	-	TSC_hg19_v1_chr16_+_67465023 U26726 BC036780 BC064536 NM_000196 U14631	-83422	+	TSC_hg19_v1_chr16_+_67562734 NM_024519 AK127792 NM_001193522 AK307467 BC012730	14289	+	NM_001193523 AK293748	15132	+	TSC_hg19_v1_chr16_+_67571364 NM_001193524 BC021284 AK295677	22935	+	NM_001138|AGRP|181|agouti related protein homolog (mouse)##U88063|AGRP|181|agouti related protein homolog (mouse)##DQ893270|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##DQ896601|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##X71490|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK300570|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK313035|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK125522|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##BC008861|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_004691|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_024519|FAM65A|79567|family with sequence similarity 65, member A##AK127792|FAM65A|79567|family with sequence similarity 65, member A##NM_001193522|FAM65A|79567|family with sequence similarity 65, member A##AK307467|FAM65A|79567|family with sequence similarity 65, member A##NM_001193523|FAM65A|79567|family with sequence similarity 65, member A##AK293748|FAM65A|79567|family with sequence similarity 65, member A##NM_001193524|FAM65A|79567|family with sequence similarity 65, member A##AK295677|FAM65A|79567|family with sequence similarity 65, member A	0.405061	CTCF.p2:0:0.405
chr22	22385015	22385150	reg1002960.p2	13.573	+	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	-47896	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	-47935	-	TSC_hg19_v1_chr22_-_22307213 AK291628 NM_014634	-77851	-	TSC_hg19_v1_chr22_+_22385369 AF026922	283	+	X02422 TSC_hg19_v1_chr22_+_22550141	165047	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	165096	+	AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##AK291628|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##NM_014634|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57	0.151117	
chr11	110247542	110247687	reg1005796.p1	13.572	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	-80301	-	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	-283484	+	AK095101 TSC_hg19_v1_chr11_+_109963524	-284086	+	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	53102	+	AY496266 TSC_hg19_v1_chr11_-_110582834	335189	-	TSC_hg19_v1_chr11_-_110582887 AB037812	335311	-	BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20##AB037812|ARHGAP20|57569|Rho GTPase activating protein 20	0.981499	CTCF.p2:5:0.981
chr5	114645588	114645725	reg1003486.p1	13.572	+	AB587510 AJ580807 NM_001040440	-13308	-	BC031242 AK307327 NM_152549	-13681	-	AY780790 AB590094 TSC_hg19_v1_chr5_-_114598563 NM_005023	-47090	-	TSC_hg19_v1_chr5_-_114880370 AL365415 AK315803 BC098385	234701	-	TSC_hg19_v1_chr5_-_114880540 BC028369 NM_020177	234907	-	BC109265 BC109266 NM_021649	292461	-	AJ580807|CCDC112|153733|coiled-coil domain containing 112##NM_001040440|CCDC112|153733|coiled-coil domain containing 112##BC031242|CCDC112|153733|coiled-coil domain containing 112##NM_152549|CCDC112|153733|coiled-coil domain containing 112##AY780790|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##NM_005023|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##AL365415|FEM1C|56929|fem-1 homolog c (C. elegans)##AK315803|FEM1C|56929|fem-1 homolog c (C. elegans)##BC098385|FEM1C|56929|fem-1 homolog c (C. elegans)##BC028369|FEM1C|56929|fem-1 homolog c (C. elegans)##NM_020177|FEM1C|56929|fem-1 homolog c (C. elegans)##BC109265|TICAM2|353376|toll-like receptor adaptor molecule 2##BC109266|TICAM2|353376|toll-like receptor adaptor molecule 2##NM_021649|TICAM2|353376|toll-like receptor adaptor molecule 2	0.745841	CTCF.p2:-3:0.746
chr7	31023348	31023439	reg1003171.p1	13.572	+	L01406 L09237 NM_000823 AY557192	-19734	+	AK309608 NM_001185060 AK309691 AK309688 NM_001185061 NM_001185062	-62377	+	NM_198098 TSC_hg19_v1_chr7_+_30951467 AK298091 AK298313 AK300995 AK304684 AK312656 AK301351 BC022486 M77829 S73482 U41517 DQ892366 DQ895575 CU692648 AB463415 AB451275 AB451402	-71924	+	TSC_hg19_v1_chr7_+_31092073 NM_001118 NM_001199635 NM_001199636 NM_001199637 AK290046 AK226138	68711	+	AK055238 AF248954 NM_022728	357129	-	AK128026 NM_194300	533584	+	L01406|GHRHR|2692|growth hormone releasing hormone receptor##L09237|GHRHR|2692|growth hormone releasing hormone receptor##NM_000823|GHRHR|2692|growth hormone releasing hormone receptor##AY557192|GHRHR|2692|growth hormone releasing hormone receptor##AK309608|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185060|AQP1|358|aquaporin 1 (Colton blood group)##AK309691|AQP1|358|aquaporin 1 (Colton blood group)##AK309688|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185061|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185062|AQP1|358|aquaporin 1 (Colton blood group)##NM_198098|AQP1|358|aquaporin 1 (Colton blood group)##AK298091|AQP1|358|aquaporin 1 (Colton blood group)##AK298313|AQP1|358|aquaporin 1 (Colton blood group)##AK300995|AQP1|358|aquaporin 1 (Colton blood group)##AK304684|AQP1|358|aquaporin 1 (Colton blood group)##AK312656|AQP1|358|aquaporin 1 (Colton blood group)##AK301351|AQP1|358|aquaporin 1 (Colton blood group)##BC022486|AQP1|358|aquaporin 1 (Colton blood group)##M77829|AQP1|358|aquaporin 1 (Colton blood group)##S73482|AQP1|358|aquaporin 1 (Colton blood group)##U41517|AQP1|358|aquaporin 1 (Colton blood group)##DQ892366|AQP1|358|aquaporin 1 (Colton blood group)##DQ895575|AQP1|358|aquaporin 1 (Colton blood group)##AB451275|AQP1|358|aquaporin 1 (Colton blood group)##AB451402|AQP1|358|aquaporin 1 (Colton blood group)##NM_001118|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199635|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199636|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199637|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK290046|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK226138|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129	0.9999	CTCF.p2:-2:1.000
chr1	207155586	207155706	reg1003662.p2	13.571	+	AK298394 NM_001122979 NM_001170631 NM_032029	-11690	-	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	-35885	-	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	-60359	-	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	50402	-	TSC_hg19_v1_chr1_-_207224335 AL833081 BC137166 BC137167 NM_018566	68713	-	AK292883 TSC_hg19_v1_chr1_+_207226619 NM_001018053 NM_006212 AJ005578 AF470623 AB044805 BC112103 BC112105 BC069350 BC069385 BC069583 BC069586 BC069600 BC075075 BC075076	70991	+	AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116##AL833081|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137166|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137167|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##NM_018566|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##AK292883|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_001018053|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_006212|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AJ005578|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AF470623|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AB044805|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112103|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112105|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069350|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069385|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069583|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069586|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069600|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075075|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075076|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	0.887564	CTCF.p2:7:0.888
chr14	100448930	100449039	reg1004070.p1	13.571	+	TSC_hg19_v1_chr14_+_100438137 AK289720 BC023997	-10830	+	TSC_hg19_v1_chr14_+_100259749 AK126980 BX247979 NM_001008707 NM_004434 BC033043 U97018 BC032541 CU689414 DQ891556 DQ894743	-189280	+	AK299812 TSC_hg19_v1_chr14_+_100240040	-208993	+	AK295919 TSC_hg19_v1_chr14_+_100485800	36775	+	TSC_hg19_v1_chr14_+_100531758 NM_016337 AK301379	82768	+	TSC_hg19_v1_chr14_+_100531768 AF087843 BC032358 AF052504	82811	+	AK289720|EVL|51466|Enah/Vasp-like##BC023997|EVL|51466|Enah/Vasp-like##AK126980|EML1|2009|echinoderm microtubule associated protein like 1##BX247979|EML1|2009|echinoderm microtubule associated protein like 1##NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1##NM_004434|EML1|2009|echinoderm microtubule associated protein like 1##BC033043|EML1|2009|echinoderm microtubule associated protein like 1##U97018|EML1|2009|echinoderm microtubule associated protein like 1##BC032541|EML1|2009|echinoderm microtubule associated protein like 1##DQ891556|EML1|2009|echinoderm microtubule associated protein like 1##DQ894743|EML1|2009|echinoderm microtubule associated protein like 1##AK299812|EML1|2009|echinoderm microtubule associated protein like 1##AK295919|EVL|51466|Enah/Vasp-like##NM_016337|EVL|51466|Enah/Vasp-like##AK301379|EVL|51466|Enah/Vasp-like##AF087843|EVL|51466|Enah/Vasp-like##BC032358|EVL|51466|Enah/Vasp-like##AF052504|EVL|51466|Enah/Vasp-like	0.052552	
chr2	7567548	7567708	reg1003706.p1	13.571	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-510041	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-549765	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-560925	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1254575	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1410091	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1576193	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.995478	CTCF.p2:-13:0.995
chr1	155561708	155561856	reg1004161.p1	13.570	+	TSC_hg19_v1_chr1_+_155533036 BC104640 BC065229 BC009847	-28748	+	TSC_hg19_v1_chr1_-_155532562 AK307595	-29201	-	AB037841 AB209068 NM_018489 TSC_hg19_v1_chr1_-_155532387	-29415	-	AK295146 AK290610 NM_018116 BX537684 BC002535 AK001366 AK056128 AK092950 AK297140 AX747823 AK222863 CR749791 AB587518 AK309573 AM393003 CU678024 EU832296 EU832380 AF272833	18248	+	TSC_hg19_v1_chr1_-_155649249 CU674814	87484	-	AK303386 NM_001198899	87826	-	BC104640|LOC645676|645676|uncharacterized LOC645676##BC065229|LOC645676|645676|uncharacterized LOC645676##BC009847|LOC645676|645676|uncharacterized LOC645676##AK307595|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)##AB037841|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)##AB209068|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)##NM_018489|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)##AK295146|MSTO1|55154|misato homolog 1 (Drosophila)##AK290610|MSTO1|55154|misato homolog 1 (Drosophila)##NM_018116|MSTO1|55154|misato homolog 1 (Drosophila)##BX537684|MSTO1|55154|misato homolog 1 (Drosophila)##BC002535|MSTO1|55154|misato homolog 1 (Drosophila)##AK001366|MSTO1|55154|misato homolog 1 (Drosophila)##AK056128|MSTO1|55154|misato homolog 1 (Drosophila)##AK092950|MSTO1|55154|misato homolog 1 (Drosophila)##AK297140|MSTO1|55154|misato homolog 1 (Drosophila)##AK222863|MSTO1|55154|misato homolog 1 (Drosophila)##CR749791|MSTO1|55154|misato homolog 1 (Drosophila)##AK309573|MSTO1|55154|misato homolog 1 (Drosophila)##AM393003|MSTO1|55154|misato homolog 1 (Drosophila)##EU832296|MSTO1|55154|misato homolog 1 (Drosophila)##EU832380|MSTO1|55154|misato homolog 1 (Drosophila)##AF272833|MSTO1|55154|misato homolog 1 (Drosophila)##AK303386|YY1AP1|55249|YY1 associated protein 1##NM_001198899|YY1AP1|55249|YY1 associated protein 1	0.987756	CTCF.p2:5:0.988
chr10	116636948	116637072	reg1003858.p2	13.568	+	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	-55461	+	TSC_hg19_v1_chr10_-_116528049 AK057834	-109002	-	TSC_hg19_v1_chr10_-_116444374 NM_001003407 NM_001003408	-192617	-	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	60953	+	TSC_hg19_v1_chr10_+_116853123 BC029592 BC035157 NM_207303 BC139916 BC139923 BC047716	216138	+	AB590245 DQ892210 DQ895406 AF042080 U95847 U97144 BC014962 NM_145793	1394670	-	BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##AK057834|ABLIM1|3983|actin binding LIM protein 1##NM_001003407|ABLIM1|3983|actin binding LIM protein 1##NM_001003408|ABLIM1|3983|actin binding LIM protein 1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC029592|ATRNL1|26033|attractin-like 1##BC035157|ATRNL1|26033|attractin-like 1##NM_207303|ATRNL1|26033|attractin-like 1##BC139916|ATRNL1|26033|attractin-like 1##BC139923|ATRNL1|26033|attractin-like 1##BC047716|ATRNL1|26033|attractin-like 1##DQ892210|GFRA1|2674|GDNF family receptor alpha 1##DQ895406|GFRA1|2674|GDNF family receptor alpha 1##AF042080|GFRA1|2674|GDNF family receptor alpha 1##U95847|GFRA1|2674|GDNF family receptor alpha 1##U97144|GFRA1|2674|GDNF family receptor alpha 1##BC014962|GFRA1|2674|GDNF family receptor alpha 1##NM_145793|GFRA1|2674|GDNF family receptor alpha 1	0.186634	
chr19	13094512	13094621	reg1003403.p1	13.568	+	AK095926 NM_152654 BC101800 BC113476 AB070695 HQ258091	-14114	+	TSC_hg19_v1_chr19_-_13068038 AF479749 NM_052850	-26521	-	AJ295986 BC004944 BC013027 BC013039 AF412816 AF475095 AJ429498 CU686712 BC069200 TSC_hg19_v1_chr19_-_13068030	-26547	-	TSC_hg19_v1_chr19_+_13106288 BC052801 NM_002501 AB385580 BT019732	11836	+	TSC_hg19_v1_chr19_+_13134807 AK297261 U18759	40238	+	TSC_hg19_v1_chr19_+_13135426 BX537794 AK295290	40831	+	AK095926|DAND5|199699|DAN domain family, member 5##NM_152654|DAND5|199699|DAN domain family, member 5##BC101800|DAND5|199699|DAN domain family, member 5##BC113476|DAND5|199699|DAN domain family, member 5##AB070695|DAND5|199699|DAN domain family, member 5##HQ258091|DAND5|199699|DAN domain family, member 5##AF479749|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##NM_052850|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AJ295986|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC004944|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC013027|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC013039|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AF412816|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AF475095|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AJ429498|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC069200|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##NM_002501|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BT019732|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK297261|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U18759|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	0.994334	CTCF.p2:0:0.994
chr2	129494275	129494427	reg1006085.p1	13.568	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-418051	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-566304	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-645490	+	NM_032144 AL136727	1242884	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	1392507	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	1408260	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.996845	CTCF.p2:3:0.997
chr5	151120308	151120454	reg1005925.p1	13.568	+	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	-53873	-	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	-53920	-	AF231022 NM_001447	-171877	-	TSC_hg19_v1_chr5_-_151138170 AK091843 AX747215 NM_004045 AK293063 BC112248 BC112250	17834	-	TSC_hg19_v1_chr5_-_151150991 AB593120	30592	-	TSC_hg19_v1_chr5_+_151151479 BX648012 NM_005754 NM_198395	31091	+	AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##AK091843|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##NM_004045|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AK293063|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112248|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112250|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AB593120|LOC100652758|100652758|uncharacterized LOC100652758##BX648012|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_005754|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_198395|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1	0.999883	CTCF.p2:4:1.000
chr18	46303566	46303691	reg1003596.p1	13.567	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-237855	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-367919	-	AM988836 AK296709 NM_001039360 EF120357	-639929	-	AK131394 NM_001190823	165519	-	AK301535 NM_001190822	172074	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	173139	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	1.067622	CTCF.p2:-4:0.999
chr20	22664763	22664869	reg1001488.p2	13.567	+	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	-98714	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	-99741	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	-99900	-	TSC_hg19_v1_chr20_+_23015949 BC117270 BC117272 NM_001052 BC069063	351218	+	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	365422	-	TSC_hg19_v1_chr20_-_23062805 AK056764	397996	-	AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##BC117270|SSTR4|6754|somatostatin receptor 4##BC117272|SSTR4|6754|somatostatin receptor 4##NM_001052|SSTR4|6754|somatostatin receptor 4##BC069063|SSTR4|6754|somatostatin receptor 4##BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##AK056764|CD93|22918|CD93 molecule	0.683468	CTCF.p2:16:0.683
chr2	220324243	220324365	reg1004037.p2	13.567	+	AY603755 TSC_hg19_v1_chr2_+_220309394	-14921	+	AK289531 TSC_hg19_v1_chr2_+_220306806	-17515	+	NM_005876 DQ395348 TSC_hg19_v1_chr2_+_220299862	-24524	+	NM_001173476	1229	+	TSC_hg19_v1_chr2_+_220363622 NM_013335 AK000999 NM_205847 AK290671 AK022578 AK222951 AK296193 BC007456	39477	+	BC031812 NM_018674 NM_182847 AK308804 BC010439 DQ892104 CU679713 AK309373	54704	+	AY603755|SPEG|10290|SPEG complex locus##AK289531|SPEG|10290|SPEG complex locus##NM_005876|SPEG|10290|SPEG complex locus##DQ395348|SPEG|10290|SPEG complex locus##NM_001173476|SPEG|10290|SPEG complex locus##NM_013335|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK000999|GMPPA|29926|GDP-mannose pyrophosphorylase A##NM_205847|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK290671|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK022578|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK222951|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK296193|GMPPA|29926|GDP-mannose pyrophosphorylase A##BC007456|GMPPA|29926|GDP-mannose pyrophosphorylase A##BC031812|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_018674|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_182847|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK308804|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##BC010439|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##DQ892104|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK309373|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary	0.229339	CTCF.p2:3:0.229
chr1	228800266	228800381	reg1005363.p1	13.564	+	AK055963 TSC_hg19_v1_chr1_+_228783500	-16892	+	TSC_hg19_v1_chr1_+_228675088 NM_001010858 BC012758	-125248	+	AK091220 NM_175055 BC100855 BC100856 BC100857 BC100858 BC137467 BC137468	-154516	+	TSC_hg19_v1_chr1_+_228870806 NM_021205 AF211836	70521	+	TSC_hg19_v1_chr1_+_228871199 AB209511 AK289971 BC040076 AF282258 AB074878 AB051826 AF378087	70976	+	AK313807 TSC_hg19_v1_chr1_+_229406857 BC004309 NM_004578 AY585832	606562	+	AK055963|DUSP5P|574029|dual specificity phosphatase 5 pseudogene##NM_001010858|RNF187|149603|ring finger protein 187##BC012758|RNF187|149603|ring finger protein 187##AK091220|HIST3H2BB|128312|histone cluster 3, H2bb##NM_175055|HIST3H2BB|128312|histone cluster 3, H2bb##BC100855|HIST3H2BB|128312|histone cluster 3, H2bb##BC100856|HIST3H2BB|128312|histone cluster 3, H2bb##BC100857|HIST3H2BB|128312|histone cluster 3, H2bb##BC100858|HIST3H2BB|128312|histone cluster 3, H2bb##BC137467|HIST3H2BB|128312|histone cluster 3, H2bb##BC137468|HIST3H2BB|128312|histone cluster 3, H2bb##NM_021205|RHOU|58480|ras homolog gene family, member U##AF211836|RHOU|58480|ras homolog gene family, member U##AB209511|RHOU|58480|ras homolog gene family, member U##AK289971|RHOU|58480|ras homolog gene family, member U##BC040076|RHOU|58480|ras homolog gene family, member U##AF282258|RHOU|58480|ras homolog gene family, member U##AB074878|RHOU|58480|ras homolog gene family, member U##AB051826|RHOU|58480|ras homolog gene family, member U##AF378087|RHOU|58480|ras homolog gene family, member U##AK313807|RAB4A|5867|RAB4A, member RAS oncogene family##BC004309|RAB4A|5867|RAB4A, member RAS oncogene family##NM_004578|RAB4A|5867|RAB4A, member RAS oncogene family##AY585832|RAB4A|5867|RAB4A, member RAS oncogene family	0.99802	CTCF.p2:-1:0.998
chr16	70429395	70429528	reg1003627.p1	13.563	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-48633	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-96313	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-96385	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	43520	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	59038	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	73379	+	AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##AK096727|FUK|197258|fucokinase	0.780574	CTCF.p2:-7:0.781
chr7	100397200	100397314	reg1005497.p1	13.562	+	AF332975 AF332976 AF332977 AF332978 AF332979 AF332980 NM_003386 NM_173059	-66009	+	NM_000799 X02157 BC093628 BC111937 BC143225 AB463610 JN849371	-78745	+	TSC_hg19_v1_chr7_+_100303755 NM_005837 BC001430 U94316	-93537	+	TSC_hg19_v1_chr7_-_100425146 NM_004444	27835	-	TSC_hg19_v1_chr7_+_100450340 AK301411	53083	+	NM_020246 BC000154 TSC_hg19_v1_chr7_+_100450361	53107	+	AF332975|ZAN|7455|zonadhesin##AF332976|ZAN|7455|zonadhesin##AF332977|ZAN|7455|zonadhesin##AF332978|ZAN|7455|zonadhesin##AF332979|ZAN|7455|zonadhesin##AF332980|ZAN|7455|zonadhesin##NM_003386|ZAN|7455|zonadhesin##NM_173059|ZAN|7455|zonadhesin##NM_000799|EPO|2056|erythropoietin##X02157|EPO|2056|erythropoietin##BC093628|EPO|2056|erythropoietin##BC111937|EPO|2056|erythropoietin##BC143225|EPO|2056|erythropoietin##JN849371|EPO|2056|erythropoietin##NM_005837|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##BC001430|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##U94316|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##NM_004444|EPHB4|2050|EPH receptor B4##AK301411|SLC12A9|56996|solute carrier family 12 (potassium/chloride transporters), member 9##NM_020246|SLC12A9|56996|solute carrier family 12 (potassium/chloride transporters), member 9##BC000154|SLC12A9|56996|solute carrier family 12 (potassium/chloride transporters), member 9	0.408799	CTCF.p2:-101:0.409
chr7	106183040	106183181	reg1004320.p1	13.561	+	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	-257587	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	-257748	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	-430095	-	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	118393	-	TSC_hg19_v1_chr7_+_106505701 AK292684	322603	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	322664	+	BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1##AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74##AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	0.722464	CTCF.p2:-10:0.722
chr5	171906100	171906225	reg1004744.p1	13.560	+	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	-24659	-	AB430862 DQ109556 BC038561 TSC_hg19_v1_chr5_-_171881387	-24791	-	NM_152277 TSC_hg19_v1_chr5_-_171710808	-195347	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	162091	+	AF275799 TSC_hg19_v1_chr5_-_172083715	177481	-	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	292049	-	AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##AB430862|SH3PXD2B|285590|SH3 and PX domains 2B##DQ109556|SH3PXD2B|285590|SH3 and PX domains 2B##BC038561|SH3PXD2B|285590|SH3 and PX domains 2B##NM_152277|UBTD2|92181|ubiquitin domain containing 2##GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1	1.739731	CTCF.p2:26:0.823	CTCF.p2:-46:0.916
chr10	72300342	72300473	reg1005231.p1	13.559	+	TSC_hg19_v1_chr10_+_72238575 NM_014431 AB033100 BC136375 BC136376	-61792	+	TSC_hg19_v1_chr10_-_72201438 BC104976 NM_018055 BC112025	-98956	-	BC033585 TSC_hg19_v1_chr10_-_72201372	-99041	-	BC047695 TSC_hg19_v1_chr10_-_72362497 AK312754	62062	-	BC063043 TSC_hg19_v1_chr10_-_72362518 FJ555237 NM_001083116 NM_005041	62119	-	AB462932 AF358666 AJ345098 NM_080722 NM_139155	132150	+	NM_014431|KIAA1274|27143|KIAA1274##AB033100|KIAA1274|27143|KIAA1274##BC136375|KIAA1274|27143|KIAA1274##BC136376|KIAA1274|27143|KIAA1274##BC104976|NODAL|4838|nodal homolog (mouse)##NM_018055|NODAL|4838|nodal homolog (mouse)##BC112025|NODAL|4838|nodal homolog (mouse)##BC033585|NODAL|4838|nodal homolog (mouse)##BC047695|PRF1|5551|perforin 1 (pore forming protein)##AK312754|PRF1|5551|perforin 1 (pore forming protein)##BC063043|PRF1|5551|perforin 1 (pore forming protein)##FJ555237|PRF1|5551|perforin 1 (pore forming protein)##NM_001083116|PRF1|5551|perforin 1 (pore forming protein)##NM_005041|PRF1|5551|perforin 1 (pore forming protein)##AF358666|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##AJ345098|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_080722|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_139155|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14	0.986447	CTCF.p2:14:0.986
chr13	110874691	110874796	reg1003234.p1	13.559	+	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	-72008	-	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	-435835	-	AB290159 AK127806 NM_001198950	-1593174	+	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	84766	-	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	84878	+	BX648393 TSC_hg19_v1_chr13_+_111134980	260215	+	M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2##BX648393|COL4A2|1284|collagen, type IV, alpha 2	0.99087	CTCF.p2:15:0.991
chr3	101414742	101414879	reg1003925.p1	13.558	+	CR456729 TSC_hg19_v1_chr3_-_101405541 BC070193 BC000690 M94314 AK311992 NM_000986	-9328	-	TSC_hg19_v1_chr3_-_101395977 BC111700 U69274 BC028062 AK312859 NM_014415	-18990	-	TSC_hg19_v1_chr3_+_101395318 BC016930	-19499	+	AK309806 AL833269 BC041085 NM_024548 AK294784	28657	+	NM_145037 TSC_hg19_v1_chr3_+_101498054	83238	+	TSC_hg19_v1_chr3_+_101498080 BC009431	83278	+	CR456729|RPL24|6152|ribosomal protein L24##BC070193|RPL24|6152|ribosomal protein L24##BC000690|RPL24|6152|ribosomal protein L24##M94314|RPL24|6152|ribosomal protein L24##AK311992|RPL24|6152|ribosomal protein L24##NM_000986|RPL24|6152|ribosomal protein L24##BC111700|ZBTB11|27107|zinc finger and BTB domain containing 11##U69274|ZBTB11|27107|zinc finger and BTB domain containing 11##BC028062|ZBTB11|27107|zinc finger and BTB domain containing 11##AK312859|ZBTB11|27107|zinc finger and BTB domain containing 11##NM_014415|ZBTB11|27107|zinc finger and BTB domain containing 11##BC016930|LOC100009676|100009676|uncharacterized LOC100009676##AK309806|CEP97|79598|centrosomal protein 97kDa##AL833269|CEP97|79598|centrosomal protein 97kDa##BC041085|CEP97|79598|centrosomal protein 97kDa##NM_024548|CEP97|79598|centrosomal protein 97kDa##AK294784|CEP97|79598|centrosomal protein 97kDa##NM_145037|FAM55C|91775|family with sequence similarity 55, member C##BC009431|FAM55C|91775|family with sequence similarity 55, member C	0.010535	
chr8	23329983	23330109	reg1005220.p1	13.555	+	TSC_hg19_v1_chr8_-_23315197 BC034477 NM_001128930 NM_004901	-14833	-	AJ131358 TSC_hg19_v1_chr8_-_23315161 AK300464 AF016032	-14892	-	TSC_hg19_v1_chr8_-_23261684 NM_002318	-68348	-	NM_016612 TSC_hg19_v1_chr8_+_23386375	56324	+	TSC_hg19_v1_chr8_+_23386395 BC132799 BC132801	56368	+	AK074708 AK223194 AF223466 AY032628 BC015013 TSC_hg19_v1_chr8_+_23386513 HQ258387 AK075313 AL833186	56477	+	BC034477|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_001128930|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_004901|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AJ131358|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AK300464|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AF016032|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_002318|LOXL2|4017|lysyl oxidase-like 2##NM_016612|SLC25A37|51312|solute carrier family 25, member 37##BC132799|SLC25A37|51312|solute carrier family 25, member 37##BC132801|SLC25A37|51312|solute carrier family 25, member 37##AK074708|SLC25A37|51312|solute carrier family 25, member 37##AK223194|SLC25A37|51312|solute carrier family 25, member 37##AF223466|SLC25A37|51312|solute carrier family 25, member 37##AY032628|SLC25A37|51312|solute carrier family 25, member 37##BC015013|SLC25A37|51312|solute carrier family 25, member 37##HQ258387|SLC25A37|51312|solute carrier family 25, member 37##AK075313|SLC25A37|51312|solute carrier family 25, member 37##AL833186|SLC25A37|51312|solute carrier family 25, member 37	1.037423	CTCF.p2:-12:0.972
chr10	86297289	86297428	reg1003625.p2	13.553	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-112663	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-165740	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-208964	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	1828905	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	1984136	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	1984172	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	1.016924	CTCF.p2:9:1.000
chr1	112312293	112312410	reg1004340.p1	13.551	+	TSC_hg19_v1_chr1_+_112298524 AK301697 AK001506 BC031062 BC011556 AF106019 AF155803 AK314312 DQ892249 DQ895449 CU679958	-13802	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	-13916	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	-14132	+	AY863198 AF120491 NM_004980 NM_172198	219371	-	NM_018704 TSC_hg19_v1_chr1_+_112938844 AK023340	626475	+	TSC_hg19_v1_chr1_+_112938871 BC016029 AK022544 AK092791 AX747733	626517	+	AK301697|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK001506|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC031062|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC011556|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF106019|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF155803|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK314312|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ892249|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ895449|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF120491|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_004980|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_172198|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like##BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK092791|LOC100129406|100129406|uncharacterized LOC100129406	0.840812	CTCF.p2:13:0.841
chr3	184592964	184593087	reg1004433.p1	13.550	+	TSC_hg19_v1_chr3_+_184529983 BC140768	-63030	+	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	-63102	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	-163262	-	TSC_hg19_v1_chr3_-_184870632 BC137178 BC137179 BC150565	277628	-	TSC_hg19_v1_chr3_-_184870849 AK091454 AX746993 NM_001025266	277773	-	BC038948 BC110460 L07077 AK301521 TSC_hg19_v1_chr3_-_184971838 AK223460 AK291798 BC011030 BC030982 NM_001166415 NM_001966	378825	-	BC140768|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##BC137178|C3orf70|285382|chromosome 3 open reading frame 70##BC137179|C3orf70|285382|chromosome 3 open reading frame 70##BC150565|C3orf70|285382|chromosome 3 open reading frame 70##NM_001025266|C3orf70|285382|chromosome 3 open reading frame 70##BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	0.996609	CTCF.p2:-13:0.997
chr15	58520055	58520184	reg1005264.p1	13.549	+	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	-89633	+	NM_001206897 NM_003888 NM_170696	-161999	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	-162241	-	NM_000236 X07228 AK293324 AK309448 TSC_hg19_v1_chr15_+_58724189 D83548 BC132825 BC136495 J03895 J03540 AB528021 HQ258274	204083	+	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	521670	-	TSC_hg19_v1_chr15_-_59041833 AK300472	521703	-	AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_000236|LIPC|3990|lipase, hepatic##X07228|LIPC|3990|lipase, hepatic##AK293324|LIPC|3990|lipase, hepatic##AK309448|LIPC|3990|lipase, hepatic##D83548|LIPC|3990|lipase, hepatic##BC132825|LIPC|3990|lipase, hepatic##BC136495|LIPC|3990|lipase, hepatic##J03895|LIPC|3990|lipase, hepatic##J03540|LIPC|3990|lipase, hepatic##HQ258274|LIPC|3990|lipase, hepatic##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10##AK300472|ADAM10|102|ADAM metallopeptidase domain 10	0.997638	CTCF.p2:-16:0.951
chr1	37900007	37900119	reg1003441.p1	13.547	+	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	-400288	-	NM_000760 NM_156039 NM_172313	-951149	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-951579	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	40034	+	TSC_hg19_v1_chr1_+_37940140 AK026884	40087	+	FJ695517 TSC_hg19_v1_chr1_+_37940180 AK093343 AX748065 BC005001	40124	+	AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A##FJ695517|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK093343|ZC3H12A|80149|zinc finger CCCH-type containing 12A##BC005001|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.999577	CTCF.p2:12:1.000
chr2	110628831	110628940	reg1003423.p1	13.547	+	NM_005054 U64675	-76920	+	AL136868 NM_001037866 NM_001123363 NM_032260	-78551	+	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	-256940	+	BC094740 NM_001205288 NM_033514	27123	+	U17077 AB590150 DQ892870 DQ896118 TSC_hg19_v1_chr2_-_110873397 BC003179	244520	-	TSC_hg19_v1_chr2_-_110873536 AK311353	244680	-	NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##U17077|MALL|7851|mal, T-cell differentiation protein-like##DQ892870|MALL|7851|mal, T-cell differentiation protein-like##DQ896118|MALL|7851|mal, T-cell differentiation protein-like##BC003179|MALL|7851|mal, T-cell differentiation protein-like##AK311353|MALL|7851|mal, T-cell differentiation protein-like	0.222094	CTCF.p2:-2:0.222
chr12	52721403	52721521	reg1005293.p1	13.546	+	BC126935 BC128063 BC069546 X99141 AK314904 NM_002282	-6302	-	NM_002284 BC069585 CU686916 X99142	-25784	+	AB527612 HQ258431 BC117465 BC117467 NM_002281	-36189	-	X99140 NM_002283	39819	-	AJ628420 BC069647 NM_033045 AK314030	57936	-	AB527176 AJ628419 NM_033033	78657	-	BC126935|KRT83|3889|keratin 83##BC128063|KRT83|3889|keratin 83##BC069546|KRT83|3889|keratin 83##X99141|KRT83|3889|keratin 83##AK314904|KRT83|3889|keratin 83##NM_002282|KRT83|3889|keratin 83##NM_002284|KRT86|3892|keratin 86##BC069585|KRT86|3892|keratin 86##X99142|KRT86|3892|keratin 86##HQ258431|KRT81|3887|keratin 81##BC117465|KRT81|3887|keratin 81##BC117467|KRT81|3887|keratin 81##NM_002281|KRT81|3887|keratin 81##X99140|KRT85|3891|keratin 85##NM_002283|KRT85|3891|keratin 85##AJ628420|KRT84|3890|keratin 84##BC069647|KRT84|3890|keratin 84##NM_033045|KRT84|3890|keratin 84##AK314030|KRT84|3890|keratin 84##AJ628419|KRT82|3888|keratin 82##NM_033033|KRT82|3888|keratin 82	0.999247	CTCF.p2:10:0.999
chr7	116570609	116570735	reg1003433.p1	13.545	+	TSC_hg19_v1_chr7_+_116502640 BC005338 AK293405 AK294409 AK315915 AK222989 AK223004 U03269 BC015963 BT006735 CU675123 U03851	-68040	+	AK314808 TSC_hg19_v1_chr7_+_116502591	-68081	+	TSC_hg19_v1_chr7_+_116502581 NM_006136	-68115	+	TSC_hg19_v1_chr7_+_116593397 BC075855 NM_018412 NM_021908 AF234882 AF234883	22713	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	22901	+	TSC_hg19_v1_chr7_+_116660271 AK093212	89595	+	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BC075855|ST7|7982|suppression of tumorigenicity 7##NM_018412|ST7|7982|suppression of tumorigenicity 7##NM_021908|ST7|7982|suppression of tumorigenicity 7##AF234882|ST7|7982|suppression of tumorigenicity 7##AF234883|ST7|7982|suppression of tumorigenicity 7##AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##AK093212|ST7|7982|suppression of tumorigenicity 7	0.998887	CTCF.p2:-6:0.999
chr11	44307980	44308118	reg1005699.p1	13.544	+	NM_000401 BX648142	-190290	+	BC068545 TSC_hg19_v1_chr11_+_44117272 U72263 BC013050	-190778	+	NM_001178083 NM_207122 U62740 TSC_hg19_v1_chr11_+_44117224 AK312375 BC010058 AK296713	-190875	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	23627	-	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	279116	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	279178	+	NM_000401|EXT2|2132|exostosin 2##BX648142|EXT2|2132|exostosin 2##BC068545|EXT2|2132|exostosin 2##U72263|EXT2|2132|exostosin 2##BC013050|EXT2|2132|exostosin 2##NM_001178083|EXT2|2132|exostosin 2##NM_207122|EXT2|2132|exostosin 2##U62740|EXT2|2132|exostosin 2##AK312375|EXT2|2132|exostosin 2##BC010058|EXT2|2132|exostosin 2##AK296713|EXT2|2132|exostosin 2##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule	0.995136	CTCF.p2:-7:0.995
chr15	81448093	81448217	reg1005306.p1	13.544	+	AK302120 BC062471 NM_173528 AK307565	-21528	+	TSC_hg19_v1_chr15_+_81293344 NM_022566	-154811	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	-165955	-	AK124725 NM_001172128 AK124565 AK131530	41063	+	NM_172217 AY324389	69534	+	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	141149	+	AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26##NM_022566|MESDC1|59274|mesoderm development candidate 1##D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##AK124725|IL16|3603|interleukin 16##NM_001172128|IL16|3603|interleukin 16##AK124565|IL16|3603|interleukin 16##AK131530|IL16|3603|interleukin 16##NM_172217|IL16|3603|interleukin 16##AY324389|IL16|3603|interleukin 16##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16	0.624333	CTCF.p2:6:0.624
chr7	35464612	35464735	reg1005236.p1	13.544	+	TSC_hg19_v1_chr7_-_35293701 NM_001077653 NM_001166220 DQ986374	-170943	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	-238881	-	DQ287932 NM_015283	-387021	-	TSC_hg19_v1_chr7_-_35734533 BC005091	269923	-	BC020264 TSC_hg19_v1_chr7_-_35734751 AK055708	270066	-	TSC_hg19_v1_chr7_-_35734795 NM_022373	270105	-	NM_001077653|TBX20|57057|T-box 20##NM_001166220|TBX20|57057|T-box 20##DQ986374|TBX20|57057|T-box 20##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC005091|HERPUD2|64224|HERPUD family member 2##BC020264|HERPUD2|64224|HERPUD family member 2##AK055708|HERPUD2|64224|HERPUD family member 2##NM_022373|HERPUD2|64224|HERPUD family member 2	0.996318	CTCF.p2:-3:0.996
chr15	99753525	99753645	reg1003968.p1	13.543	+	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	-108345	+	AK058162 NM_001167902	-202562	-	BC104743 BC104744 BC105686 NM_001102612	-204748	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	36121	-	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	37831	-	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	38057	+	BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein##AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28	0.997257	CTCF.p2:10:0.997
chr11	34607897	34608055	reg1004837.p1	13.540	+	AK075197 AK290808 TSC_hg19_v1_chr11_-_34535310 AK074633 AF115403 AF049703 BC029743 AK312537 NM_001243080 NM_001422 DQ123839	-72650	-	AB528439 AK290817 AF115402 NM_001243081 NM_198381	-74745	-	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	-147427	+	NM_001206615 NM_012153 TSC_hg19_v1_chr11_+_34642639	34637	+	TSC_hg19_v1_chr11_+_34642661 AF212848 AF203977 AF170583 AF124438 AF124439	34690	+	AK310867 NM_001206616	46034	+	AK075197|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK290808|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK074633|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115403|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF049703|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##BC029743|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK312537|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243080|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001422|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##DQ123839|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK290817|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115402|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243081|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_198381|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase##NM_001206615|EHF|26298|ets homologous factor##NM_012153|EHF|26298|ets homologous factor##AF212848|EHF|26298|ets homologous factor##AF203977|EHF|26298|ets homologous factor##AF170583|EHF|26298|ets homologous factor##AF124438|EHF|26298|ets homologous factor##AF124439|EHF|26298|ets homologous factor##AK310867|EHF|26298|ets homologous factor##NM_001206616|EHF|26298|ets homologous factor	0.995816	CTCF.p2:-17:0.996
chr17	74404783	74404910	reg1004530.p1	13.538	+	TSC_hg19_v1_chr17_+_74381419 AF266756	-23405	+	CU676993 CU688902 NM_001142602 TSC_hg19_v1_chr17_+_74381358 AK292614 AK023393	-23551	+	TSC_hg19_v1_chr17_+_74380953 AK292294	-23892	+	BC007822 TSC_hg19_v1_chr17_-_74449235	44397	-	TSC_hg19_v1_chr17_-_74449273 AB051521 NM_022066	44442	-	BC092430 NM_001166579	44586	+	AF266756|SPHK1|8877|sphingosine kinase 1##NM_001142602|SPHK1|8877|sphingosine kinase 1##AK292614|SPHK1|8877|sphingosine kinase 1##AK023393|SPHK1|8877|sphingosine kinase 1##AK292294|SPHK1|8877|sphingosine kinase 1##BC007822|UBE2O|63893|ubiquitin-conjugating enzyme E2O##AB051521|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_022066|UBE2O|63893|ubiquitin-conjugating enzyme E2O##BC092430|AANAT|15|aralkylamine N-acetyltransferase##NM_001166579|AANAT|15|aralkylamine N-acetyltransferase	0.996201	CTCF.p2:-14:0.996
chr1	203410113	203410216	reg1003155.p1	13.537	+	TSC_hg19_v1_chr1_-_203320290 NM_002023	-89876	-	AK172740 TSC_hg19_v1_chr1_-_203320256	-89903	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	-89955	-	NM_002725 NM_201348 TSC_hg19_v1_chr1_+_203444937	34745	+	U29089 BC032498 TSC_hg19_v1_chr1_+_203444965	34796	+	AJ133790 AY077681 NM_014359 AF161702	53117	+	NM_002023|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin##NM_002725|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_201348|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##U29089|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##BC032498|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin	0.078581	
chr1	461873	461998	reg1004982.p1	13.537	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-94287	+	NM_001005484	-392845	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-432530	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	160107	-	TSC_hg19_v1_chr1_-_714015 BC006361	252082	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	300960	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	0.899243	CTCF.p2:12:0.883
chr11	123511782	123511921	reg1005037.p1	13.536	+	AB033027 TSC_hg19_v1_chr11_+_123431038	-80814	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	-80878	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	-115347	+	AJ243396 AB032984 TSC_hg19_v1_chr11_-_123525042	13110	-	TSC_hg19_v1_chr11_-_123525303 AK314513 AL136589 NM_001040151 NM_018400	13456	-	AK023751 TSC_hg19_v1_chr11_-_123612326 BC013382 NM_003455	100494	-	AB033027|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AK314513|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AL136589|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_001040151|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_018400|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AK023751|ZNF202|7753|zinc finger protein 202##BC013382|ZNF202|7753|zinc finger protein 202##NM_003455|ZNF202|7753|zinc finger protein 202	1.017216	CTCF.p2:-7:0.997
chr1	153959287	153959440	reg1005506.p1	13.535	+	BC009227 AF498948 BT019700 BT019701 AY423722 CU674404 AB464116 TSC_hg19_v1_chr1_-_153958723 AM392651 AM393152 AM393265 AM393465 AM393739 AM393810 AK128675 BC073168 AK291580 BC000799 NM_002870 X75593 BC094846	-589	-	NM_006694	-8913	-	TSC_hg19_v1_chr1_-_153950145 AF115850 AB016488 BC000499	-9208	-	AK312070 BC070219 TSC_hg19_v1_chr1_+_153963237 D28454 NM_001030 L19739 BC002658 U57847	3885	+	AK128000 NM_001159484 NM_207308	168228	-	AF474157 AB529194 TSC_hg19_v1_chr1_-_154155632 AY004867 AK125367	196250	-	BC009227|RAB13|5872|RAB13, member RAS oncogene family##AF498948|RAB13|5872|RAB13, member RAS oncogene family##BT019700|RAB13|5872|RAB13, member RAS oncogene family##BT019701|RAB13|5872|RAB13, member RAS oncogene family##AY423722|RAB13|5872|RAB13, member RAS oncogene family##AM392651|RAB13|5872|RAB13, member RAS oncogene family##AM393152|RAB13|5872|RAB13, member RAS oncogene family##AM393265|RAB13|5872|RAB13, member RAS oncogene family##AM393465|RAB13|5872|RAB13, member RAS oncogene family##AM393739|RAB13|5872|RAB13, member RAS oncogene family##AM393810|RAB13|5872|RAB13, member RAS oncogene family##AK128675|RAB13|5872|RAB13, member RAS oncogene family##BC073168|RAB13|5872|RAB13, member RAS oncogene family##AK291580|RAB13|5872|RAB13, member RAS oncogene family##BC000799|RAB13|5872|RAB13, member RAS oncogene family##NM_002870|RAB13|5872|RAB13, member RAS oncogene family##X75593|RAB13|5872|RAB13, member RAS oncogene family##BC094846|RAB13|5872|RAB13, member RAS oncogene family##NM_006694|JTB|10899|jumping translocation breakpoint##AF115850|JTB|10899|jumping translocation breakpoint##AB016488|JTB|10899|jumping translocation breakpoint##BC000499|JTB|10899|jumping translocation breakpoint##AK312070|RPS27|6232|ribosomal protein S27##BC070219|RPS27|6232|ribosomal protein S27##D28454|RPS27|6232|ribosomal protein S27##NM_001030|RPS27|6232|ribosomal protein S27##L19739|RPS27|6232|ribosomal protein S27##BC002658|RPS27|6232|ribosomal protein S27##U57847|RPS27|6232|ribosomal protein S27##AK128000|NUP210L|91181|nucleoporin 210kDa-like##NM_001159484|NUP210L|91181|nucleoporin 210kDa-like##NM_207308|NUP210L|91181|nucleoporin 210kDa-like##AF474157|TPM3|7170|tropomyosin 3##AY004867|TPM3|7170|tropomyosin 3##AK125367|TPM3|7170|tropomyosin 3	0.994203	CTCF.p2:22:0.994
chr1	35252194	35252301	reg1004000.p2	13.534	+	TSC_hg19_v1_chr1_+_35247838 NM_001005752 BC012918	-4368	+	AK026139 NM_024009 TSC_hg19_v1_chr1_+_35246807	-5441	+	AK057628 NM_153212	-26906	+	NM_002060 AK291563 AK313477 BC072389 BC027889 M96789	6362	+	NM_001164824 BC034598	72410	-	BX648912 BC107421 NM_001164825 TSC_hg19_v1_chr1_-_35325339 BC011880 BC073851 AK074853 BC064320 NM_138428	73128	-	NM_001005752|GJB3|2707|gap junction protein, beta 3, 31kDa##BC012918|GJB3|2707|gap junction protein, beta 3, 31kDa##AK026139|GJB3|2707|gap junction protein, beta 3, 31kDa##NM_024009|GJB3|2707|gap junction protein, beta 3, 31kDa##AK057628|GJB4|127534|gap junction protein, beta 4, 30.3kDa##NM_153212|GJB4|127534|gap junction protein, beta 4, 30.3kDa##NM_002060|GJA4|2701|gap junction protein, alpha 4, 37kDa##AK291563|GJA4|2701|gap junction protein, alpha 4, 37kDa##BC072389|GJA4|2701|gap junction protein, alpha 4, 37kDa##BC027889|GJA4|2701|gap junction protein, alpha 4, 37kDa##M96789|GJA4|2701|gap junction protein, alpha 4, 37kDa##NM_001164824|C1orf212|113444|chromosome 1 open reading frame 212##BC034598|C1orf212|113444|chromosome 1 open reading frame 212##BX648912|C1orf212|113444|chromosome 1 open reading frame 212##BC107421|C1orf212|113444|chromosome 1 open reading frame 212##NM_001164825|C1orf212|113444|chromosome 1 open reading frame 212##BC011880|C1orf212|113444|chromosome 1 open reading frame 212##BC073851|C1orf212|113444|chromosome 1 open reading frame 212##AK074853|C1orf212|113444|chromosome 1 open reading frame 212##BC064320|C1orf212|113444|chromosome 1 open reading frame 212##NM_138428|C1orf212|113444|chromosome 1 open reading frame 212	0.768812	CTCF.p2:-11:0.769
chr15	64183317	64183440	reg1002693.p1	13.534	+	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-57238	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-57258	-	TSC_hg19_v1_chr15_-_64126081 U50078	-57294	-	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	155232	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	202719	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	204762	+	AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1	0.999548	CTCF.p2:1:1.000
chr7	5179761	5179879	reg1004360.p1	13.534	+	AK293069 NM_001204456 NM_001204513 TSC_hg19_v1_chr7_+_5085490 AF226869 NM_021163	-94319	+	TSC_hg19_v1_chr7_+_5013663 BC068459 AK309798 AK308526 AK311517 BX538059 AK303831 BC026736	-166134	+	AY424288 BC037881 BC048346 TSC_hg19_v1_chr7_-_4998841 AK094524 BC067905 NM_001100600 NM_198403	-181021	-	TSC_hg19_v1_chr7_+_5229863 AL080155 NM_001033518 NM_001033519 NM_015610 NM_016003 AK024279 BC007596 AK023041	50009	+	TSC_hg19_v1_chr7_+_5229890 AK315468 BC004116 BC021200	50077	+	TSC_hg19_v1_chr7_+_5229917 BC021012 BC021068	50095	+	AK293069|RBAK|57786|RB-associated KRAB zinc finger##NM_001204456|RBAK|57786|RB-associated KRAB zinc finger##NM_001204513|RBAK-LOC389458|100533952|RBAK-LOC389458 readthrough##NM_021163|RBAK|57786|RB-associated KRAB zinc finger##BC068459|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK309798|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK308526|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK311517|RNF216P1|441191|ring finger protein 216 pseudogene 1##BX538059|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK303831|RNF216P1|441191|ring finger protein 216 pseudogene 1##BC026736|RNF216P1|441191|ring finger protein 216 pseudogene 1##AY424288|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC037881|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC048346|MMD2|221938|monocyte to macrophage differentiation-associated 2##AK094524|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC067905|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_001100600|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_198403|MMD2|221938|monocyte to macrophage differentiation-associated 2##AL080155|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033518|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033519|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_015610|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_016003|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK024279|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC007596|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK023041|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK315468|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC004116|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021200|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021012|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021068|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	1.863342	CTCF.p2:-5:0.987	CTCF.p2:101:0.876
chr17	77389474	77389595	reg1003992.p1	13.533	+	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-318504	+	AF329840 NM_198593 BC021553	-359012	+	TSC_hg19_v1_chr17_+_77020308 AK055541	-369224	+	NM_001082575	89028	-	AY230663 BC041453 NM_178543 AY358622	315355	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	362447	+	AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2	0.839296	CTCF.p2:10:0.839
chr11	58903481	58903616	reg1005469.p1	13.532	+	TSC_hg19_v1_chr11_+_58874641 BC062456 NM_001142703 NM_001142704 NM_198947 BC005998 AK304258 AY457926 AK303520	-28886	+	AK091965 AX747281 DQ084381 NM_001220496 NM_080661 AK055818	-192796	+	NM_001220494 AK300479 BC008353	-208411	+	TSC_hg19_v1_chr11_-_58910222 AK124475 BC028022	6695	-	TSC_hg19_v1_chr11_+_58910331 AK092237 AX747422 NM_001142519 NM_001142520 NM_001142521	6762	+	NM_022074 NM_198847 AK291453 BC071759 AK092061 AX747338	8731	+	BC062456|FAM111B|374393|family with sequence similarity 111, member B##NM_001142703|FAM111B|374393|family with sequence similarity 111, member B##NM_001142704|FAM111B|374393|family with sequence similarity 111, member B##NM_198947|FAM111B|374393|family with sequence similarity 111, member B##BC005998|FAM111B|374393|family with sequence similarity 111, member B##AK304258|FAM111B|374393|family with sequence similarity 111, member B##AY457926|FAM111B|374393|family with sequence similarity 111, member B##AK303520|FAM111B|374393|family with sequence similarity 111, member B##AK091965|GLYATL1|92292|glycine-N-acyltransferase-like 1##DQ084381|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220496|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_080661|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK055818|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK092237|FAM111A|63901|family with sequence similarity 111, member A##NM_001142519|FAM111A|63901|family with sequence similarity 111, member A##NM_001142520|FAM111A|63901|family with sequence similarity 111, member A##NM_001142521|FAM111A|63901|family with sequence similarity 111, member A##NM_022074|FAM111A|63901|family with sequence similarity 111, member A##NM_198847|FAM111A|63901|family with sequence similarity 111, member A##AK291453|FAM111A|63901|family with sequence similarity 111, member A##BC071759|FAM111A|63901|family with sequence similarity 111, member A##AK092061|FAM111A|63901|family with sequence similarity 111, member A	0.998287	CTCF.p2:14:0.998
chr5	151205069	151205187	reg1004372.p1	13.532	+	TSC_hg19_v1_chr5_+_151151662 X78262	-53464	+	TSC_hg19_v1_chr5_+_151151516 U32519 BC108278	-53599	+	AK130003 AK222606 AK300098 BX647869 TSC_hg19_v1_chr5_+_151151514	-53614	+	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	99234	-	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	579623	-	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	1665137	+	X78262|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##U32519|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##BC108278|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##AK130003|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##AK222606|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##AK300098|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##BX647869|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1	0.991432	CTCF.p2:-16:0.991
chr5	172143917	172144036	reg1003699.p1	13.532	+	AF275799 TSC_hg19_v1_chr5_-_172083715	-60333	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-75723	+	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	-262473	-	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	54235	-	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	117342	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	242472	+	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1	0.97162	CTCF.p2:-1:0.972
chr14	75555364	75555503	reg1004175.p1	13.531	+	NM_001042430 NM_024643 AK223359 AK303882 TSC_hg19_v1_chr14_+_75536343 AK026746 BC004259	-19090	+	TSC_hg19_v1_chr14_-_75530719 BC035568 NM_001107 NM_203488 AK312101	-24699	-	AF195657 BC012544 TSC_hg19_v1_chr14_-_75518171 NM_001040108 NM_014381	-37250	-	AY048580 AB463142 AY080896 TSC_hg19_v1_chr14_-_75593718 BC093881 BC112101	38237	-	TSC_hg19_v1_chr14_-_75593752 AB082526 AK128693 NM_033116	38319	-	AK023615 TSC_hg19_v1_chr14_-_75600130	44687	-	NM_001042430|FAM164C|79696|family with sequence similarity 164, member C##NM_024643|FAM164C|79696|family with sequence similarity 164, member C##AK223359|FAM164C|79696|family with sequence similarity 164, member C##AK303882|FAM164C|79696|family with sequence similarity 164, member C##AK026746|FAM164C|79696|family with sequence similarity 164, member C##BC004259|FAM164C|79696|family with sequence similarity 164, member C##BC035568|ACYP1|97|acylphosphatase 1, erythrocyte (common) type##NM_001107|ACYP1|97|acylphosphatase 1, erythrocyte (common) type##NM_203488|ACYP1|97|acylphosphatase 1, erythrocyte (common) type##AK312101|ACYP1|97|acylphosphatase 1, erythrocyte (common) type##AF195657|MLH3|27030|mutL homolog 3 (E. coli)##BC012544|MLH3|27030|mutL homolog 3 (E. coli)##NM_001040108|MLH3|27030|mutL homolog 3 (E. coli)##NM_014381|MLH3|27030|mutL homolog 3 (E. coli)##AY048580|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##AY080896|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##BC093881|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##BC112101|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##AB082526|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##AK128693|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##NM_033116|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##AK023615|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)	0.988626	CTCF.p2:18:0.989
chr10	11312655	11312794	reg1005271.p1	13.530	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-105232	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-105278	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-105299	+	NM_001080491	261549	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	340912	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	471674	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.72901	CTCF.p2:15:0.562
chr19	4872751	4872858	reg1004029.p1	13.530	+	AK223054 AK312740 TSC_hg19_v1_chr19_-_4867712 AK291104 NM_001164189 NM_001164194 NM_005817	-5062	-	AF055574 TSC_hg19_v1_chr19_-_4867668 AK226088 AK225400 AK122671 BC005818 BC007566 BC019278 AF057140	-5139	-	TSC_hg19_v1_chr19_-_4867650 AK225045 BC001590	-5159	-	NM_001080523	30074	-	TSC_hg19_v1_chr19_+_4909512 AK307239 AK303361 NM_001048201 AK074377 AK314579	36695	+	TSC_hg19_v1_chr19_+_4910185 AK289389	37374	+	AK223054|PLIN3|10226|perilipin 3##AK312740|PLIN3|10226|perilipin 3##AK291104|PLIN3|10226|perilipin 3##NM_001164189|PLIN3|10226|perilipin 3##NM_001164194|PLIN3|10226|perilipin 3##NM_005817|PLIN3|10226|perilipin 3##AF055574|PLIN3|10226|perilipin 3##AK226088|PLIN3|10226|perilipin 3##AK225400|PLIN3|10226|perilipin 3##AK122671|PLIN3|10226|perilipin 3##BC005818|PLIN3|10226|perilipin 3##BC007566|PLIN3|10226|perilipin 3##BC019278|PLIN3|10226|perilipin 3##AF057140|PLIN3|10226|perilipin 3##AK225045|PLIN3|10226|perilipin 3##BC001590|PLIN3|10226|perilipin 3##NM_001080523|ARRDC5|645432|arrestin domain containing 5##AK307239|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##AK303361|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##NM_001048201|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##AK074377|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##AK314579|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##AK289389|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1	0.999116	CTCF.p2:-8:0.999
chr6	6057814	6057953	reg1004888.p1	13.530	+	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-50186	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	-50742	-	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-796193	+	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	263002	-	TSC_hg19_v1_chr6_-_6320897 NM_000129	263027	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	531067	+	BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86	0.993512	CTCF.p2:-5:0.994
chr16	2924974	2925101	reg1004925.p1	13.529	+	CU679465 AB010779 AF321182 BC009726 AY358396 NM_022119	-16900	-	NM_145252 AY359021 JN411265 BC009722 AB528168 AM392915 AM393869 EF067313 AK311810	-44799	+	BC074999 BC075000 TSC_hg19_v1_chr16_+_2867242 AY359034 AF058300 AB031329 AB031330	-57791	+	NM_001142499 NM_001142500 NM_138439 TSC_hg19_v1_chr16_+_2933215 BC014089	8219	+	TSC_hg19_v1_chr16_+_2961983 BC028572 NM_020912 NM_032296	36927	+	TSC_hg19_v1_chr16_+_2961994 AB046772	36960	+	AB010779|PRSS22|64063|protease, serine, 22##AF321182|PRSS22|64063|protease, serine, 22##BC009726|PRSS22|64063|protease, serine, 22##AY358396|PRSS22|64063|protease, serine, 22##NM_022119|PRSS22|64063|protease, serine, 22##NM_145252|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AY359021|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##JN411265|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC009722|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM392915|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM393869|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##EF067313|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AK311810|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC074999|PRSS21|10942|protease, serine, 21 (testisin)##BC075000|PRSS21|10942|protease, serine, 21 (testisin)##AY359034|PRSS21|10942|protease, serine, 21 (testisin)##AF058300|PRSS21|10942|protease, serine, 21 (testisin)##AB031329|PRSS21|10942|protease, serine, 21 (testisin)##AB031330|PRSS21|10942|protease, serine, 21 (testisin)##NM_001142499|FLYWCH2|114984|FLYWCH family member 2##NM_001142500|FLYWCH2|114984|FLYWCH family member 2##NM_138439|FLYWCH2|114984|FLYWCH family member 2##BC014089|FLYWCH2|114984|FLYWCH family member 2##BC028572|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_020912|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_032296|FLYWCH1|84256|FLYWCH-type zinc finger 1##AB046772|FLYWCH1|84256|FLYWCH-type zinc finger 1	0.963292	CTCF.p2:-5:0.963
chr17	49034251	49034394	reg1002126.p1	13.529	+	AK313904 NM_001243877	-88984	-	TSC_hg19_v1_chr17_-_48943716 BC070493 BC098415 NM_001243885 NM_005749	-90626	-	NM_175575	-121718	+	TSC_hg19_v1_chr17_-_49124138 BC007524 BC059946 AK299553 AK307793 AK295098 AK309214 AK024068 NM_001251971	89906	-	TSC_hg19_v1_chr17_-_49198227 AF327452 BC106048 AK302789 AY850123 AB011088 BC146755 BC153878 AK091921 AX747254 NM_001130527 NM_001130528 NM_003971	163833	-	NM_001018136 TSC_hg19_v1_chr17_+_49230927 AK291105 NM_000269 NM_198175	196589	+	AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1##BC070493|TOB1|10140|transducer of ERBB2, 1##BC098415|TOB1|10140|transducer of ERBB2, 1##NM_001243885|TOB1|10140|transducer of ERBB2, 1##NM_005749|TOB1|10140|transducer of ERBB2, 1##NM_175575|WFIKKN2|124857|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2##BC007524|SPAG9|9043|sperm associated antigen 9##BC059946|SPAG9|9043|sperm associated antigen 9##AK299553|SPAG9|9043|sperm associated antigen 9##AK307793|SPAG9|9043|sperm associated antigen 9##AK295098|SPAG9|9043|sperm associated antigen 9##AK309214|SPAG9|9043|sperm associated antigen 9##AK024068|SPAG9|9043|sperm associated antigen 9##NM_001251971|SPAG9|9043|sperm associated antigen 9##AF327452|SPAG9|9043|sperm associated antigen 9##AK302789|SPAG9|9043|sperm associated antigen 9##AY850123|SPAG9|9043|sperm associated antigen 9##AB011088|SPAG9|9043|sperm associated antigen 9##BC146755|SPAG9|9043|sperm associated antigen 9##BC153878|SPAG9|9043|sperm associated antigen 9##AK091921|SPAG9|9043|sperm associated antigen 9##NM_001130527|SPAG9|9043|sperm associated antigen 9##NM_001130528|SPAG9|9043|sperm associated antigen 9##NM_003971|SPAG9|9043|sperm associated antigen 9##NM_001018136|NME1-NME2|654364|NME1-NME2 readthrough##AK291105|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_000269|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_198175|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in	0.133282	
chr20	37709931	37710050	reg1005406.p1	13.529	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-119001	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-154922	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-155001	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1607887	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1947504	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1947674	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.81569	CTCF.p2:3:0.816
chr2	3466120	3466252	reg1004114.p2	13.529	+	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	-82681	+	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	-84630	-	TSC_hg19_v1_chr2_-_2335085 AK307797	-1131102	-	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	57112	-	TSC_hg19_v1_chr2_-_3523345 NM_018269	57165	-	AJ224117 BT019670 CR541820 DQ892597 DQ895824 TSC_hg19_v1_chr2_-_3605880 AF048994 AK096913 AF048995 AK075490	139693	-	AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK307797|MYT1L|23040|myelin transcription factor 1-like##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1##NM_018269|ADI1|55256|acireductone dioxygenase 1##AJ224117|RNASEH1|246243|ribonuclease H1##BT019670|RNASEH1|246243|ribonuclease H1##CR541820|RNASEH1|246243|ribonuclease H1##DQ892597|RNASEH1|246243|ribonuclease H1##DQ895824|RNASEH1|246243|ribonuclease H1##AF048994|RNASEH1|246243|ribonuclease H1##AK096913|RNASEH1|246243|ribonuclease H1##AF048995|RNASEH1|246243|ribonuclease H1##AK075490|RNASEH1|246243|ribonuclease H1	0.603085	CTCF.p2:15:0.603
chr12	10305936	10306076	reg1006081.p1	13.528	+	AF400595 AF400596 AF400597 AF400598 AF400599 AF400600 AF400601 AF400602 AY026769 AY026770 AY026771 CU687154 AF313469 BC013385 AY009090 AK297028 BC093829 BC093831 BC071746 AK298679 AK298724 AK313247 CR749536 AK295108 AF313468 AJ312372 AJ312373 AY359002 AK294111 NM_022570 NM_197947 NM_197948 NM_197949 NM_197950 NM_197954	-23233	-	CU691652 DQ892440 DQ895651 AK300979 AK291584 BC039072 AK313589 AK075114 BC067746 AF200949 NM_016511 AK091989 AX747295 AY358587	-54415	-	AY358265 NM_207345 AK307335	-122731	+	AB102861 AB590414 CU692540 DQ891409 DQ894585 AF035776 AK292124 AK295409 AK298040 BC022295 BC055085 AB010710 AK308009 NM_001172632 NM_001172633 NM_002543	18726	-	NM_153022 AY358845 AK055728	25587	+	AF287012 TSC_hg19_v1_chr12_+_10365506 AF087847 AK303581 AK315418 AK074195 BC028315 NM_031412 BC009309 AL136676 BX648781 BC008891	59470	+	AF400595|CLEC7A|64581|C-type lectin domain family 7, member A##AF400596|CLEC7A|64581|C-type lectin domain family 7, member A##AF400597|CLEC7A|64581|C-type lectin domain family 7, member A##AF400598|CLEC7A|64581|C-type lectin domain family 7, member A##AF400599|CLEC7A|64581|C-type lectin domain family 7, member A##AF400600|CLEC7A|64581|C-type lectin domain family 7, member A##AF400601|CLEC7A|64581|C-type lectin domain family 7, member A##AF400602|CLEC7A|64581|C-type lectin domain family 7, member A##AY026769|CLEC7A|64581|C-type lectin domain family 7, member A##AY026770|CLEC7A|64581|C-type lectin domain family 7, member A##AY026771|CLEC7A|64581|C-type lectin domain family 7, member A##AF313469|CLEC7A|64581|C-type lectin domain family 7, member A##BC013385|CLEC7A|64581|C-type lectin domain family 7, member A##AY009090|CLEC7A|64581|C-type lectin domain family 7, member A##AK297028|CLEC7A|64581|C-type lectin domain family 7, member A##BC093829|CLEC7A|64581|C-type lectin domain family 7, member A##BC093831|CLEC7A|64581|C-type lectin domain family 7, member A##BC071746|CLEC7A|64581|C-type lectin domain family 7, member A##AK298679|CLEC7A|64581|C-type lectin domain family 7, member A##AK298724|CLEC7A|64581|C-type lectin domain family 7, member A##AK313247|CLEC7A|64581|C-type lectin domain family 7, member A##CR749536|CLEC7A|64581|C-type lectin domain family 7, member A##AK295108|CLEC7A|64581|C-type lectin domain family 7, member A##AF313468|CLEC7A|64581|C-type lectin domain family 7, member A##AJ312372|CLEC7A|64581|C-type lectin domain family 7, member A##AJ312373|CLEC7A|64581|C-type lectin domain family 7, member A##AY359002|CLEC7A|64581|C-type lectin domain family 7, member A##AK294111|CLEC7A|64581|C-type lectin domain family 7, member A##NM_022570|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197947|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197948|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197949|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197950|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197954|CLEC7A|64581|C-type lectin domain family 7, member A##DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A##DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A##AK300979|CLEC1A|51267|C-type lectin domain family 1, member A##AK291584|CLEC1A|51267|C-type lectin domain family 1, member A##BC039072|CLEC1A|51267|C-type lectin domain family 1, member A##AK313589|CLEC1A|51267|C-type lectin domain family 1, member A##AK075114|CLEC1A|51267|C-type lectin domain family 1, member A##BC067746|CLEC1A|51267|C-type lectin domain family 1, member A##AF200949|CLEC1A|51267|C-type lectin domain family 1, member A##NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A##AK091989|CLEC1A|51267|C-type lectin domain family 1, member A##AY358587|CLEC1A|51267|C-type lectin domain family 1, member A##AY358265|CLEC9A|283420|C-type lectin domain family 9, member A##NM_207345|CLEC9A|283420|C-type lectin domain family 9, member A##AK307335|CLEC9A|283420|C-type lectin domain family 9, member A##AB102861|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##DQ891409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##DQ894585|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AF035776|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK292124|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK295409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK298040|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##BC022295|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##BC055085|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AB010710|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK308009|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_001172632|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_001172633|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_002543|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_153022|C12orf59|120939|chromosome 12 open reading frame 59##AY358845|C12orf59|120939|chromosome 12 open reading frame 59##AK055728|C12orf59|120939|chromosome 12 open reading frame 59##AF287012|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AF087847|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK303581|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK315418|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK074195|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC028315|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##NM_031412|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC009309|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AL136676|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BX648781|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC008891|GABARAPL1|23710|GABA(A) receptor-associated protein like 1	0.913567	CTCF.p2:-6:0.914
chr1	32029772	32029916	reg1006205.p1	13.528	+	AK093784 AK316357 AX748305 NM_001199039 NM_018565 AK296118	-143157	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	-143778	+	NM_001199037 AK298512	-146811	+	NM_001204414 NM_022164 TSC_hg19_v1_chr1_+_32042115 AK292770 AK075398 AK296322 AK298382	12259	+	TSC_hg19_v1_chr1_+_32042122 AY358421	12278	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	12298	+	AK093784|SERINC2|347735|serine incorporator 2##AK316357|SERINC2|347735|serine incorporator 2##NM_001199039|SERINC2|347735|serine incorporator 2##NM_018565|SERINC2|347735|serine incorporator 2##AK296118|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##NM_001204414|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_022164|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK292770|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK075398|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK296322|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298382|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AY358421|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1	0.459394	CTCF.p2:-3:0.459
chr7	83040452	83040586	reg1004456.p1	13.528	+	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	-248283	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	-248650	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	-967439	-	AK303925 NM_001178129	230227	-	NM_012431	237959	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	783803	-	NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	0.997645	CTCF.p2:-21:0.998
chr12	6149294	6149415	reg1004384.p1	13.527	+	AJ272204 NM_020373	-93957	-	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	-94880	-	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	-546016	+	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	84405	-	TSC_hg19_v1_chr12_+_6309565 NM_001769 AK315219 AK308700 AK296332 AK309527 AY966455 X60111 AK296894 AK298431 BC011988 M38690 AY423720 DQ891314 DQ894498 AB590218 CU680148 L34068	160216	+	AK001527 NM_018173 BC104751 BC105961 BC109095	270279	+	AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor##NM_001769|CD9|928|CD9 molecule##AK315219|CD9|928|CD9 molecule##AK308700|CD9|928|CD9 molecule##AK296332|CD9|928|CD9 molecule##AK309527|CD9|928|CD9 molecule##AY966455|CD9|928|CD9 molecule##X60111|CD9|928|CD9 molecule##AK296894|CD9|928|CD9 molecule##AK298431|CD9|928|CD9 molecule##BC011988|CD9|928|CD9 molecule##M38690|CD9|928|CD9 molecule##AY423720|CD9|928|CD9 molecule##DQ891314|CD9|928|CD9 molecule##DQ894498|CD9|928|CD9 molecule##L34068|CD9|928|CD9 molecule##AK001527|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_018173|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC104751|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC105961|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC109095|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6	0.774105	CTCF.p2:14:0.774
chr4	48580532	48580650	reg1005124.p1	13.526	+	TSC_hg19_v1_chr4_+_48492278 BC136265 AY191416 NM_175619	-88310	+	TSC_hg19_v1_chr4_+_48485353 AK126542 NM_152679 BC019066 BC012048 DQ892628 EU176704 AY704414	-95164	+	TSC_hg19_v1_chr4_+_48343571 BC006139 BC007701 BC012067 NM_020846 AB040891	-236978	+	TSC_hg19_v1_chr4_-_48782266 AL833444	201678	-	TSC_hg19_v1_chr4_-_48782286 BC040987 BC050336 NM_015030	201707	-	TSC_hg19_v1_chr4_+_48833104 NM_001079840 NM_001079841 NM_017830 AK297864 AF323665 AF324350 AK000462 BC003409 NM_001079839 NM_001079842 NM_001168254 BC088361	252660	+	BC136265|ZAR1|326340|zygote arrest 1##AY191416|ZAR1|326340|zygote arrest 1##NM_175619|ZAR1|326340|zygote arrest 1##AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC006139|SLAIN2|57606|SLAIN motif family, member 2##BC007701|SLAIN2|57606|SLAIN motif family, member 2##BC012067|SLAIN2|57606|SLAIN motif family, member 2##NM_020846|SLAIN2|57606|SLAIN motif family, member 2##AB040891|SLAIN2|57606|SLAIN motif family, member 2##AL833444|FRYL|285527|FRY-like##BC040987|FRYL|285527|FRY-like##BC050336|FRYL|285527|FRY-like##NM_015030|FRYL|285527|FRY-like##NM_001079840|OCIAD1|54940|OCIA domain containing 1##NM_001079841|OCIAD1|54940|OCIA domain containing 1##NM_017830|OCIAD1|54940|OCIA domain containing 1##AK297864|OCIAD1|54940|OCIA domain containing 1##AF323665|OCIAD1|54940|OCIA domain containing 1##AF324350|OCIAD1|54940|OCIA domain containing 1##AK000462|OCIAD1|54940|OCIA domain containing 1##BC003409|OCIAD1|54940|OCIA domain containing 1##NM_001079839|OCIAD1|54940|OCIA domain containing 1##NM_001079842|OCIAD1|54940|OCIA domain containing 1##NM_001168254|OCIAD1|54940|OCIA domain containing 1##BC088361|OCIAD1|54940|OCIA domain containing 1	0.317443	CTCF.p2:-13:0.288
chr8	41852888	41853040	reg1004141.p1	13.526	+	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-98654	-	AK026601 TSC_hg19_v1_chr8_+_41685847	-167139	+	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	-197824	-	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	56535	-	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	157569	+	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	212124	-	AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic##U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue	0.99475	CTCF.p2:-4:0.995
chr10	121204975	121205118	reg1005610.p1	13.525	+	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-237785	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-266699	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-266743	-	NM_002925	90998	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	97144	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	151062	-	BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.999911	CTCF.p2:-8:1.000
chr22	43017636	43017782	reg1005825.p1	13.525	+	TSC_hg19_v1_chr22_-_43010942 BC095411 NM_032311 NM_178136	-6758	-	TSC_hg19_v1_chr22_-_43010902 AK024626 AK299751 BC019643	-6796	-	CR456456 TSC_hg19_v1_chr22_-_43010893	-6817	-	TSC_hg19_v1_chr22_-_43027436 AY421735	9736	-	AF092923 NM_001165877	18897	-	TSC_hg19_v1_chr22_-_43040633 AK302204 NM_001171660	22927	-	BC095411|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##NM_032311|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##NM_178136|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK024626|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK299751|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##BC019643|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CR456456|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AF092923|ATP5L2|267020|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2##NM_001165877|ATP5L2|267020|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2##AK302204|CYB5R3|1727|cytochrome b5 reductase 3##NM_001171660|CYB5R3|1727|cytochrome b5 reductase 3	0.997528	CTCF.p2:0:0.998
chr5	13988093	13988208	reg1002719.p1	13.525	+	AX800026 AY045575 NM_001369	-43562	-	TSC_hg19_v1_chr5_-_11904184 AK296232	-2083966	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	-2084114	-	AY050643 TSC_hg19_v1_chr5_-_14011873	23720	-	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	155522	+	TSC_hg19_v1_chr5_+_14488527 AK131423	500389	+	AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)	0.035871	
chr17	46696038	46696156	reg1004426.p1	13.524	+	AK096222 NM_024016	-3797	-	TSC_hg19_v1_chr17_-_46688363 AK223249 M16937 NM_004502	-7725	-	CU677273 BC015345 AK290653 TSC_hg19_v1_chr17_-_46688350	-7783	-	AK056123 AB464577 AK315480 BC015565 AK056414 NM_024017 TSC_hg19_v1_chr17_-_46703952	7691	-	BC030950 AF331165 NM_032391	103783	-	BT007410 AB464574 DQ893517 DQ896496 U57052 BC007092 BC070233 AK313266 AK225234 NM_006361 AY937237	109939	-	AK096222|HOXB8|3218|homeobox B8##NM_024016|HOXB8|3218|homeobox B8##AK223249|HOXB7|3217|homeobox B7##M16937|HOXB7|3217|homeobox B7##NM_004502|HOXB7|3217|homeobox B7##BC015345|HOXB7|3217|homeobox B7##AK290653|HOXB7|3217|homeobox B7##AK056123|HOXB9|3219|homeobox B9##AK315480|HOXB9|3219|homeobox B9##BC015565|HOXB9|3219|homeobox B9##AK056414|HOXB9|3219|homeobox B9##NM_024017|HOXB9|3219|homeobox B9##BC030950|PRAC|84366|prostate cancer susceptibility candidate##AF331165|PRAC|84366|prostate cancer susceptibility candidate##NM_032391|PRAC|84366|prostate cancer susceptibility candidate##BT007410|HOXB13|10481|homeobox B13##DQ893517|HOXB13|10481|homeobox B13##DQ896496|HOXB13|10481|homeobox B13##U57052|HOXB13|10481|homeobox B13##BC007092|HOXB13|10481|homeobox B13##BC070233|HOXB13|10481|homeobox B13##AK313266|HOXB13|10481|homeobox B13##AK225234|HOXB13|10481|homeobox B13##NM_006361|HOXB13|10481|homeobox B13##AY937237|HOXB13|10481|homeobox B13	0.98822	CTCF.p2:17:0.988
chr1	187897572	187897698	reg1005075.p1	13.523	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-1099547	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-1248145	-	M33478 NM_002597	-1467408	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	2549100	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	4229968	+	AY643711 NM_001039152	4388486	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.029586	
chr1	205888218	205888350	reg1005713.p1	13.523	+	BC039170 BC063477 AK057131 AK290786 TSC_hg19_v1_chr1_-_205819261 NM_152491	-69025	-	TSC_hg19_v1_chr1_+_205782474 AK097788	-105783	+	TSC_hg19_v1_chr1_-_205782160 AL831974 AL832001 AL832362 BX641054 NM_173854 BX648979	-106117	-	BC151208 BC136538 BC144233 AF331525 NM_052934 NM_134325	24282	-	TSC_hg19_v1_chr1_-_206137445 AK124556	249164	-	BC035696 NM_001123168 BC137545 BC137546	250632	+	BC039170|PM20D1|148811|peptidase M20 domain containing 1##BC063477|PM20D1|148811|peptidase M20 domain containing 1##AK057131|PM20D1|148811|peptidase M20 domain containing 1##AK290786|PM20D1|148811|peptidase M20 domain containing 1##NM_152491|PM20D1|148811|peptidase M20 domain containing 1##AL831974|SLC41A1|254428|solute carrier family 41, member 1##AL832001|SLC41A1|254428|solute carrier family 41, member 1##AL832362|SLC41A1|254428|solute carrier family 41, member 1##BX641054|SLC41A1|254428|solute carrier family 41, member 1##NM_173854|SLC41A1|254428|solute carrier family 41, member 1##BX648979|SLC41A1|254428|solute carrier family 41, member 1##BC151208|SLC26A9|115019|solute carrier family 26, member 9##BC136538|SLC26A9|115019|solute carrier family 26, member 9##BC144233|SLC26A9|115019|solute carrier family 26, member 9##AF331525|SLC26A9|115019|solute carrier family 26, member 9##NM_052934|SLC26A9|115019|solute carrier family 26, member 9##NM_134325|SLC26A9|115019|solute carrier family 26, member 9##AK124556|LOC100132966|100132966|uncharacterized LOC100132966##BC035696|FAM72A|729533|family with sequence similarity 72, member A##NM_001123168|FAM72A|729533|family with sequence similarity 72, member A##BC137545|FAM72A|729533|family with sequence similarity 72, member A##BC137546|FAM72B|653820|family with sequence similarity 72, member B	0.92723	CTCF.p2:-2:0.927
chr4	6875812	6875926	reg1003996.p2	13.523	+	TSC_hg19_v1_chr4_+_6784518 AK124715 EF553521	-91341	+	TSC_hg19_v1_chr4_+_6784467 BC150286 D86985	-91395	+	TSC_hg19_v1_chr4_+_6784458 NM_001100590 NM_014743	-91414	+	TSC_hg19_v1_chr4_+_6911192 NM_001113361	35283	+	TSC_hg19_v1_chr4_-_6911379 BC032036	35536	-	TSC_hg19_v1_chr4_+_6911497 NM_020773	35607	+	AK124715|KIAA0232|9778|KIAA0232##EF553521|KIAA0232|9778|KIAA0232##BC150286|KIAA0232|9778|KIAA0232##D86985|KIAA0232|9778|KIAA0232##NM_001100590|KIAA0232|9778|KIAA0232##NM_014743|KIAA0232|9778|KIAA0232##NM_001113361|TBC1D14|57533|TBC1 domain family, member 14##NM_020773|TBC1D14|57533|TBC1 domain family, member 14	0.997814	CTCF.p2:2:0.998
chr9	134053808	134053922	reg1003424.p1	13.521	+	TSC_hg19_v1_chr9_+_134001016 D14689 AB159230	-52815	+	TSC_hg19_v1_chr9_+_134000975 BC105998 AK307573 NM_005085 AL832609 X64228 BC045620 BC012500	-52891	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	-81907	+	BC049388 NM_033387 AK095423	98054	-	TSC_hg19_v1_chr9_+_134165108 AK075207 NM_032728 BC006362 AK027568 AK315502 AB385550	111363	+	TSC_hg19_v1_chr9_+_134269515 BC002872	215701	+	D14689|NUP214|8021|nucleoporin 214kDa##AB159230|NUP214|8021|nucleoporin 214kDa##BC105998|NUP214|8021|nucleoporin 214kDa##AK307573|NUP214|8021|nucleoporin 214kDa##NM_005085|NUP214|8021|nucleoporin 214kDa##AL832609|NUP214|8021|nucleoporin 214kDa##X64228|NUP214|8021|nucleoporin 214kDa##BC045620|NUP214|8021|nucleoporin 214kDa##BC012500|NUP214|8021|nucleoporin 214kDa##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like##BC049388|FAM78A|286336|family with sequence similarity 78, member A##NM_033387|FAM78A|286336|family with sequence similarity 78, member A##AK095423|FAM78A|286336|family with sequence similarity 78, member A##AK075207|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##NM_032728|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC006362|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK027568|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK315502|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC002872|PRRC2B|84726|proline-rich coiled-coil 2B	0.494626	CTCF.p2:-2:0.495
chr1	231493701	231493814	reg1003659.p1	13.520	+	TSC_hg19_v1_chr1_+_231473794 BC015740	-19970	+	NM_001010984 NM_032018 BC068478 TSC_hg19_v1_chr1_+_231473753	-20039	+	CU690194 AB587600 BC035763 TSC_hg19_v1_chr1_-_231473577 NM_175876 AK096460	-20203	-	AF229245 NM_022051	67032	-	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	170674	+	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	268798	+	BC015740|C1orf124|83932|chromosome 1 open reading frame 124##NM_001010984|C1orf124|83932|chromosome 1 open reading frame 124##NM_032018|C1orf124|83932|chromosome 1 open reading frame 124##BC068478|C1orf124|83932|chromosome 1 open reading frame 124##BC035763|EXOC8|149371|exocyst complex component 8##NM_175876|EXOC8|149371|exocyst complex component 8##AK096460|EXOC8|149371|exocyst complex component 8##AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)##NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)##FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1	0.91324	CTCF.p2:-6:0.913
chr5	171467303	171467426	reg1003534.p2	13.520	+	BC026213 NM_012300 NM_033644 NM_033645	-33488	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	-33720	-	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	-33836	-	AB015718 TSC_hg19_v1_chr5_-_171615170	147774	-	AK307943 TSC_hg19_v1_chr5_-_171615203	147839	-	TSC_hg19_v1_chr5_-_171615241 BC070077 AK313350	147909	-	BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB015718|STK10|6793|serine/threonine kinase 10##AK307943|STK10|6793|serine/threonine kinase 10##BC070077|STK10|6793|serine/threonine kinase 10##AK313350|STK10|6793|serine/threonine kinase 10	0.998533	CTCF.p2:0:0.999
chr7	150869750	150869890	reg1005010.p1	13.520	+	NM_001098834	-4954	-	TSC_hg19_v1_chr7_+_150811722 BC044644 EU831441 EU831533	-58033	+	TSC_hg19_v1_chr7_+_150783865 AF359283 NM_001042535 NM_031946 BC069236 AF413079 AB209781	-85901	+	AF417920 NM_001142459 NM_001142460	14657	-	AK125565 NM_080871	15098	-	TSC_hg19_v1_chr7_-_150924279 BC001661 AF261092 AF261091 NM_005692 NM_007189	54455	-	NM_001098834|GBX1|2636|gastrulation brain homeobox 1##BC044644|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##EU831441|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##EU831533|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AF359283|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##NM_001042535|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##NM_031946|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##BC069236|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AF413079|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AB209781|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AF417920|ASB10|136371|ankyrin repeat and SOCS box containing 10##NM_001142459|ASB10|136371|ankyrin repeat and SOCS box containing 10##NM_001142460|ASB10|136371|ankyrin repeat and SOCS box containing 10##AK125565|ASB10|136371|ankyrin repeat and SOCS box containing 10##NM_080871|ASB10|136371|ankyrin repeat and SOCS box containing 10##BC001661|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2##AF261092|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2##AF261091|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2##NM_005692|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2##NM_007189|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2	1.935059	CTCF.p2:-27:1.000	CTCF.p2:34:0.935
chr8	68402650	68402750	reg1003654.p2	13.520	+	BC030256 TSC_hg19_v1_chr8_+_68256207	-146545	+	NM_006421 TSC_hg19_v1_chr8_-_68256017	-146735	-	TSC_hg19_v1_chr8_+_67976626 AM156947 BX649147 NM_024790 BC029445 AK096205 AB527449 AK127108	-426064	+	AF221594 AY044833 BC033684 NM_020361	255898	-	TSC_hg19_v1_chr8_+_68864347 BC068571 BC036055 AJ437636	461652	+	TSC_hg19_v1_chr8_+_68864598 AY508996 AY508997 NM_024870 NM_025170	461895	+	NM_006421|ARFGEF1|10565|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)##AM156947|CSPP1|79848|centrosome and spindle pole associated protein 1##BX649147|CSPP1|79848|centrosome and spindle pole associated protein 1##NM_024790|CSPP1|79848|centrosome and spindle pole associated protein 1##BC029445|CSPP1|79848|centrosome and spindle pole associated protein 1##AK096205|CSPP1|79848|centrosome and spindle pole associated protein 1##AK127108|CSPP1|79848|centrosome and spindle pole associated protein 1##AF221594|CPA6|57094|carboxypeptidase A6##AY044833|CPA6|57094|carboxypeptidase A6##BC033684|CPA6|57094|carboxypeptidase A6##NM_020361|CPA6|57094|carboxypeptidase A6##AJ437636|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY508996|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY508997|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##NM_024870|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##NM_025170|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	0.0	
chr2	4007025	4007156	reg1005265.p1	13.519	+	AK302299 NM_018436 BC029652	-301293	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-364521	+	X74803 TSC_hg19_v1_chr2_+_3627765	-379345	+	U23752 AB028641 NM_003108 BC025789 AB464713	1825725	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	2998810	-	TSC_hg19_v1_chr2_-_7006650 AK308509	2999613	-	AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##X74803|RPS7|6201|ribosomal protein S7##U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	0.628715	CTCF.p2:-7:0.629
chr7	81129086	81129217	reg1005202.p1	13.519	+	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-580477	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-580717	-	HM217020 HM217021 HM217022 HM217023 HM217024 HM217025 HM217026 AB590184 CU678951 DQ893062 DQ896314 TSC_hg19_v1_chr7_+_80276126	-853104	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	270223	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	943695	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	943929	-	AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##HM217020|CD36|948|CD36 molecule (thrombospondin receptor)##HM217021|CD36|948|CD36 molecule (thrombospondin receptor)##HM217022|CD36|948|CD36 molecule (thrombospondin receptor)##HM217023|CD36|948|CD36 molecule (thrombospondin receptor)##HM217024|CD36|948|CD36 molecule (thrombospondin receptor)##HM217025|CD36|948|CD36 molecule (thrombospondin receptor)##HM217026|CD36|948|CD36 molecule (thrombospondin receptor)##DQ893062|CD36|948|CD36 molecule (thrombospondin receptor)##DQ896314|CD36|948|CD36 molecule (thrombospondin receptor)##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1	0.998995	CTCF.p2:-3:0.999
chr17	16894823	16894951	reg1004666.p1	13.517	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	-19483	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-301283	+	AK131401 NM_020787	-337726	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	51077	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	214726	-	TSC_hg19_v1_chr17_-_17109636 BC031263 AK295282 NM_178836	214770	-	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6##BC031263|PLD6|201164|phospholipase D family, member 6##AK295282|PLD6|201164|phospholipase D family, member 6##NM_178836|PLD6|201164|phospholipase D family, member 6	0.500778	CTCF.p2:6:0.501
chr8	23331900	23332045	reg1003852.p1	13.517	+	TSC_hg19_v1_chr8_-_23315197 BC034477 NM_001128930 NM_004901	-16759	-	AJ131358 TSC_hg19_v1_chr8_-_23315161 AK300464 AF016032	-16818	-	TSC_hg19_v1_chr8_-_23261684 NM_002318	-70274	-	NM_016612 TSC_hg19_v1_chr8_+_23386375	54398	+	TSC_hg19_v1_chr8_+_23386395 BC132799 BC132801	54442	+	AK074708 AK223194 AF223466 AY032628 BC015013 TSC_hg19_v1_chr8_+_23386513 HQ258387 AK075313 AL833186	54551	+	BC034477|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_001128930|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_004901|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AJ131358|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AK300464|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AF016032|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_002318|LOXL2|4017|lysyl oxidase-like 2##NM_016612|SLC25A37|51312|solute carrier family 25, member 37##BC132799|SLC25A37|51312|solute carrier family 25, member 37##BC132801|SLC25A37|51312|solute carrier family 25, member 37##AK074708|SLC25A37|51312|solute carrier family 25, member 37##AK223194|SLC25A37|51312|solute carrier family 25, member 37##AF223466|SLC25A37|51312|solute carrier family 25, member 37##AY032628|SLC25A37|51312|solute carrier family 25, member 37##BC015013|SLC25A37|51312|solute carrier family 25, member 37##HQ258387|SLC25A37|51312|solute carrier family 25, member 37##AK075313|SLC25A37|51312|solute carrier family 25, member 37##AL833186|SLC25A37|51312|solute carrier family 25, member 37	0.607753	CTCF.p2:-10:0.608
chr16	27166475	27166587	reg1003922.p2	13.516	+	NM_001145545 BC031257 AK311574	-88284	+	AF105378 NM_006040	-1463185	+	TSC_hg19_v1_chr16_-_25269141 AK303472	-1897326	-	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	48296	+	AK297166 NM_001145348	48764	+	TSC_hg19_v1_chr16_-_27280055 AK315674	113521	-	NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5##AK315674|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)	0.973841	CTCF.p2:-3:0.974
chr16	85454420	85454580	reg1003960.p1	13.516	+	BC093665 BC111944 AK126284 NM_198491	-308446	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-393130	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-409371	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	190521	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	192453	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	268042	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	1.138704	CTCF.p2:43:0.967
chr7	102179875	102179999	reg1003800.p1	13.516	+	DQ893151 DQ896446 TSC_hg19_v1_chr7_-_102119367 X98433 BC040116 BC024165 BC141830 BC139902 BC065711 L37127 X82385 AK290515 NM_006234	-60594	-	TSC_hg19_v1_chr7_+_102105459 AB209379 CU688900	-74445	+	TSC_hg19_v1_chr7_+_102105430 AL133057 BC030547 NM_152892 AK290967 AK313771	-74529	+	AK302217 NM_001031618 NM_001166339	11741	+	AJ277739 AJ277740 AJ277741 AB384935 BC056864 BC071870 TSC_hg19_v1_chr7_-_102212997 BC044209 BC050598	33050	-	AF468111 BC110985 TSC_hg19_v1_chr7_-_102213031 AB209398 BC141857 AK309487 NM_001097615	33103	-	DQ893151|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##DQ896446|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X98433|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC040116|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC024165|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC141830|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC139902|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC065711|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##L37127|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X82385|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AK290515|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##NM_006234|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AB209379|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AL133057|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##BC030547|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##NM_152892|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK290967|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK313771|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##AJ277739|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AJ277740|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277741|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AF468111|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AB209398|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_001097615|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3	0.987588	CTCF.p2:-12:0.988
chr14	51086400	51086523	reg1004932.p1	13.514	+	AK312518 TSC_hg19_v1_chr14_+_51026862 AB385220 CU679803	-59544	+	NM_015915 NM_181598 AY032844 TSC_hg19_v1_chr14_+_51026833 AK223436 AK290185 BC010708	-59671	+	NM_001127713	-86662	+	AJ292969 AK023071 TSC_hg19_v1_chr14_-_51135016 AK290883	48479	-	BC020537 TSC_hg19_v1_chr14_-_51135025 BC006385 NM_021818 AK021500	48565	-	TSC_hg19_v1_chr14_-_51135048 AK225896 AK095903	48607	-	AK312518|ATL1|51062|atlastin GTPase 1##NM_015915|ATL1|51062|atlastin GTPase 1##NM_181598|ATL1|51062|atlastin GTPase 1##AY032844|ATL1|51062|atlastin GTPase 1##AK223436|ATL1|51062|atlastin GTPase 1##AK290185|ATL1|51062|atlastin GTPase 1##BC010708|ATL1|51062|atlastin GTPase 1##NM_001127713|ATL1|51062|atlastin GTPase 1##AJ292969|SAV1|60485|salvador homolog 1 (Drosophila)##AK023071|SAV1|60485|salvador homolog 1 (Drosophila)##AK290883|SAV1|60485|salvador homolog 1 (Drosophila)##BC020537|SAV1|60485|salvador homolog 1 (Drosophila)##BC006385|SAV1|60485|salvador homolog 1 (Drosophila)##NM_021818|SAV1|60485|salvador homolog 1 (Drosophila)##AK021500|SAV1|60485|salvador homolog 1 (Drosophila)##AK225896|SAV1|60485|salvador homolog 1 (Drosophila)##AK095903|SAV1|60485|salvador homolog 1 (Drosophila)	0.022843	
chr1	84588605	84588724	reg1004311.p1	13.514	+	TSC_hg19_v1_chr1_+_84543744 AK074904 BC037304 BC035058 NM_002731 NM_207578 AK314550 BC016285 M34181 AB463197 AM392526 AM393233 AM393317 AM393497 CU677593 EU832783 GQ129404 AB451239 AB451364	-44828	+	AK126792 BC048970 BC032829 TSC_hg19_v1_chr1_-_84464848 BC060878 BC028350 NM_024686	-123868	-	TSC_hg19_v1_chr1_-_84326677 BC036594	-261988	-	TSC_hg19_v1_chr1_+_84609953 NM_182948 BX537705 BX641026	21293	+	TSC_hg19_v1_chr1_+_84609995 AY927364 AK304322 EU832837 GQ129233	21351	+	AY927365 AK296482 AK304375 CR936631 NM_001242857 NM_001242858 NM_001242859	41375	+	AK074904|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BC035058|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_002731|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_207578|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK314550|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BC016285|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##M34181|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM392526|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM393233|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM393317|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM393497|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##EU832783|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##GQ129404|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AB451239|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AB451364|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##NM_182948|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BX537705|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BX641026|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AY927364|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK304322|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##EU832837|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##GQ129233|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK296482|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK304375|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##CR936631|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_001242857|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_001242858|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_001242859|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	0.995432	CTCF.p2:9:0.995
chr5	112093386	112093527	reg1004186.p1	13.514	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	-19883	+	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	-50245	+	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	-338583	-	NM_001204193 NM_001204194 NM_001204196 NM_001204199 NM_003135 TSC_hg19_v1_chr5_+_112196975	103473	+	TSC_hg19_v1_chr5_+_112196983 AK311803 BC000186 X12791 AK313576 BC017830 BC010947 BC018669 AB587423	103568	+	CU688102 AY562243 BC065926 TSC_hg19_v1_chr5_-_112257925 BC000232 M74090 AK295436 AK298268 AK299902 AK300048 AK312522 M73547 AX775929 BX648005 NM_005669	164531	-	NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_001204193|SRP19|6728|signal recognition particle 19kDa##NM_001204194|SRP19|6728|signal recognition particle 19kDa##NM_001204196|SRP19|6728|signal recognition particle 19kDa##NM_001204199|SRP19|6728|signal recognition particle 19kDa##NM_003135|SRP19|6728|signal recognition particle 19kDa##AK311803|SRP19|6728|signal recognition particle 19kDa##BC000186|SRP19|6728|signal recognition particle 19kDa##X12791|SRP19|6728|signal recognition particle 19kDa##BC017830|SRP19|6728|signal recognition particle 19kDa##BC010947|SRP19|6728|signal recognition particle 19kDa##BC018669|SRP19|6728|signal recognition particle 19kDa##AY562243|REEP5|7905|receptor accessory protein 5##BC065926|REEP5|7905|receptor accessory protein 5##BC000232|REEP5|7905|receptor accessory protein 5##M74090|REEP5|7905|receptor accessory protein 5##AK295436|REEP5|7905|receptor accessory protein 5##AK298268|REEP5|7905|receptor accessory protein 5##AK299902|REEP5|7905|receptor accessory protein 5##AK312522|REEP5|7905|receptor accessory protein 5##BX648005|REEP5|7905|receptor accessory protein 5##NM_005669|REEP5|7905|receptor accessory protein 5	0.998498	CTCF.p2:21:0.998
chr12	28093842	28093968	reg1004631.p1	13.513	+	TSC_hg19_v1_chr12_+_27933193 AK095405 NM_020782 BC137116 BC137117 BC108669 AB528162 AB587405 EU446834	-160694	+	NM_001146221	-169697	-	TSC_hg19_v1_chr12_+_27863764 BC015862 AK075378 AK075515 BC109372 BC063515 BC028346	-230131	+	M26958 J03802 NM_198964 NM_198966 AK313476 M26960 BC005961 M26959	29060	-	NM_002820 NM_198965	31010	-	TSC_hg19_v1_chr12_+_28343404 BC035168	249506	+	AK095405|KLHDC5|57542|kelch domain containing 5##NM_020782|KLHDC5|57542|kelch domain containing 5##BC137116|KLHDC5|57542|kelch domain containing 5##BC137117|KLHDC5|57542|kelch domain containing 5##BC108669|KLHDC5|57542|kelch domain containing 5##EU446834|KLHDC5|57542|kelch domain containing 5##NM_001146221|MANSC4|100287284|MANSC domain containing 4##BC015862|MRPS35|60488|mitochondrial ribosomal protein S35##AK075378|MRPS35|60488|mitochondrial ribosomal protein S35##AK075515|MRPS35|60488|mitochondrial ribosomal protein S35##BC109372|MRPS35|60488|mitochondrial ribosomal protein S35##BC063515|MRPS35|60488|mitochondrial ribosomal protein S35##BC028346|MRPS35|60488|mitochondrial ribosomal protein S35##M26958|PTHLH|5744|parathyroid hormone-like hormone##J03802|PTHLH|5744|parathyroid hormone-like hormone##NM_198964|PTHLH|5744|parathyroid hormone-like hormone##NM_198966|PTHLH|5744|parathyroid hormone-like hormone##AK313476|PTHLH|5744|parathyroid hormone-like hormone##M26960|PTHLH|5744|parathyroid hormone-like hormone##BC005961|PTHLH|5744|parathyroid hormone-like hormone##M26959|PTHLH|5744|parathyroid hormone-like hormone##NM_002820|PTHLH|5744|parathyroid hormone-like hormone##NM_198965|PTHLH|5744|parathyroid hormone-like hormone	0.998282	CTCF.p2:15:0.998
chr14	21226250	21226403	reg1006119.p1	13.513	+	NM_006683 X76383 BC096698 BC096731 BC069407	-12214	+	TSC_hg19_v1_chr14_+_21156940 NM_001097577 NM_194431 BC062698 BC020704	-69394	+	TSC_hg19_v1_chr14_+_21152776 AK313989 BC015520 BC054880 BX248010	-73550	+	AY358865 NM_022360 BC128030	10277	+	BC020848 NM_005615 AK313580	22892	+	AK098375 NM_198232	44221	-	NM_006683|EDDM3A|10876|epididymal protein 3A##X76383|EDDM3A|10876|epididymal protein 3A##BC096698|EDDM3A|10876|epididymal protein 3A##BC096731|EDDM3A|10876|epididymal protein 3A##BC069407|EDDM3A|10876|epididymal protein 3A##NM_001097577|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_194431|RNASE4|6038|ribonuclease, RNase A family, 4##BC062698|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC020704|ANG|283|angiogenin, ribonuclease, RNase A family, 5##AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC015520|RNASE4|6038|ribonuclease, RNase A family, 4##BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BX248010|RNASE4|6038|ribonuclease, RNase A family, 4##AY358865|EDDM3B|64184|epididymal protein 3B##NM_022360|EDDM3B|64184|epididymal protein 3B##BC128030|EDDM3B|64184|epididymal protein 3B##BC020848|RNASE6|6039|ribonuclease, RNase A family, k6##NM_005615|RNASE6|6039|ribonuclease, RNase A family, k6##AK313580|RNASE6|6039|ribonuclease, RNase A family, k6##AK098375|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198232|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)	0.509051	CTCF.p2:-8:0.509
chr21	45066646	45066772	reg1003898.p2	13.512	+	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	-219714	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	-220720	-	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-477535	+	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	12653	-	TSC_hg19_v1_chr21_+_45079444 BC028386 NM_015056 BC014005 AK056263 D80001 AB385292	12749	+	TSC_hg19_v1_chr21_+_45138985 BC005825 NM_003681	72270	+	AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein##BC028386|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##NM_015056|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##BC014005|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##AK056263|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##D80001|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##BC005825|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase##NM_003681|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase	0.999303	CTCF.p2:11:0.999
chr4	173934771	173934886	reg1003526.p1	13.511	+	NM_001034845 BC047551 BC144036 BC144037 BC063015	-1200184	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-2923414	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-2923630	-	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	155124	+	BC043556 TSC_hg19_v1_chr4_-_174090314	155482	-	BC040577 TSC_hg19_v1_chr4_-_174090813	155979	-	NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.99913	CTCF.p2:-43:0.999
chr12	68710962	68711089	reg1003879.p1	13.509	+	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	-63721	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	-91473	-	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	-157603	-	TSC_hg19_v1_chr12_-_68726142 BC010622 AK297311 BC034945 BC022042 AF267851 BC028355 AK314461 NM_001205028 NM_001205029 NM_017440 NM_020128	15081	-	TSC_hg19_v1_chr12_+_69004678 NM_001010942 NM_001251917 NM_001251918 NM_001251921 NM_001251922 NM_015646	293621	+	TSC_hg19_v1_chr12_+_69004704 AK312371 BC078173 AK316447 AJ420497 AK298818 AK316543	293670	+	BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC010622|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK297311|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC034945|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC022042|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AF267851|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC028355|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK314461|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205028|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205029|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_017440|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_020128|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001010942|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251917|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251918|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251921|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251922|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_015646|RAP1B|5908|RAP1B, member of RAS oncogene family##AK312371|RAP1B|5908|RAP1B, member of RAS oncogene family##BC078173|RAP1B|5908|RAP1B, member of RAS oncogene family##AK316447|RAP1B|5908|RAP1B, member of RAS oncogene family##AJ420497|RAP1B|5908|RAP1B, member of RAS oncogene family##AK298818|RAP1B|5908|RAP1B, member of RAS oncogene family##AK316543|RAP1B|5908|RAP1B, member of RAS oncogene family	0.999153	CTCF.p2:3:0.999
chr1	1227342	1227464	reg1005454.p1	13.508	+	NM_001130413 BC040882 AK127357	-11512	+	TSC_hg19_v1_chr1_+_1209415 DQ898177	-18003	+	TSC_hg19_v1_chr1_-_1209229 BC094777 NM_058167 NM_194315 NM_194457 NM_194458	-18173	-	TSC_hg19_v1_chr1_-_1243285 BC051194 NM_030649	15988	-	TSC_hg19_v1_chr1_+_1243987 AK075292 BC034304 NM_153339 AK298218	16595	+	AB463529 AM393218 CR533557 AK056652 AK022675 TSC_hg19_v1_chr1_-_1260041 BC042444 AK092190 AK297350 BC008041 BC020199 BC007978 AK291387 AK021939 AK058018 AL136813 NM_017871 AK023356 AK027767	32621	-	NM_001130413|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##BC040882|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##AK127357|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##BC094777|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_058167|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194315|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194457|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194458|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##BC051194|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3##NM_030649|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3##AK075292|PUSL1|126789|pseudouridylate synthase-like 1##BC034304|PUSL1|126789|pseudouridylate synthase-like 1##NM_153339|PUSL1|126789|pseudouridylate synthase-like 1##AK298218|PUSL1|126789|pseudouridylate synthase-like 1##AM393218|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##CR533557|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK056652|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK022675|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC042444|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK092190|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK297350|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC008041|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC020199|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC007978|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK291387|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK021939|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK058018|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AL136813|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##NM_017871|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK023356|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK027767|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like	0.791113	CTCF.p2:4:0.791
chr12	54613981	54614091	reg1003489.p1	13.508	+	BC088352 BC000417 TSC_hg19_v1_chr12_-_54582755 AK091468 AX747003 NM_001243789 NM_001243790 BC105607 AK001789 AK001235 AK222473 AK290274 NM_001243787 NM_001243788 NM_001243791 NM_014311	-31350	-	BC030212 TSC_hg19_v1_chr12_-_54541132	-72955	-	TSC_hg19_v1_chr12_+_54519846 BC009385	-94178	+	BC006821 NM_001127322 TSC_hg19_v1_chr12_-_54653330	39288	-	NM_001127321 TSC_hg19_v1_chr12_-_54653370	39335	-	TSC_hg19_v1_chr12_-_54673880 L07515 S62077	59846	-	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC009385|LOC400043|400043|uncharacterized LOC400043##BC006821|CBX5|23468|chromobox homolog 5##NM_001127322|CBX5|23468|chromobox homolog 5##NM_001127321|CBX5|23468|chromobox homolog 5##L07515|CBX5|23468|chromobox homolog 5##S62077|CBX5|23468|chromobox homolog 5	0.989455	CTCF.p2:-15:0.989
chr4	124486055	124486165	reg1003927.p1	13.508	+	AK026960 BC063856 NM_005841	-165437	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-168154	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-641858	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	1147704	-	NM_024582	1751456	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	4068029	+	AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	0.351537	CTCF.p2:9:0.281
chr1	182753839	182753956	reg1004082.p1	13.507	+	BC069677 BC069718 BC103865 BC103866 BC103867 AF297015 NM_001102450 NM_033345	-111856	-	AF493937 BT006638 CU675307 AB528682 U94829 U70426 BC006243 TSC_hg19_v1_chr1_-_182573525 AK301261 AK311880 NM_002928	-180427	-	CU675308 TSC_hg19_v1_chr1_+_182569465	-184451	+	NM_001200050 NM_001200051 NM_001200052 NM_001200056 NM_030769 BC042003	4687	+	BC034966 AK313225 BC058003 TSC_hg19_v1_chr1_+_182758907 AK297017 AK301068 AY336748	4994	+	TSC_hg19_v1_chr1_+_182808450 NM_001357 AK226102	54560	+	BC069677|RGS8|85397|regulator of G-protein signaling 8##BC069718|RGS8|85397|regulator of G-protein signaling 8##BC103865|RGS8|85397|regulator of G-protein signaling 8##BC103866|RGS8|85397|regulator of G-protein signaling 8##BC103867|RGS8|85397|regulator of G-protein signaling 8##AF297015|RGS8|85397|regulator of G-protein signaling 8##NM_001102450|RGS8|85397|regulator of G-protein signaling 8##NM_033345|RGS8|85397|regulator of G-protein signaling 8##AF493937|RGS16|6004|regulator of G-protein signaling 16##BT006638|RGS16|6004|regulator of G-protein signaling 16##U94829|RGS16|6004|regulator of G-protein signaling 16##U70426|RGS16|6004|regulator of G-protein signaling 16##BC006243|RGS16|6004|regulator of G-protein signaling 16##AK301261|RGS16|6004|regulator of G-protein signaling 16##AK311880|RGS16|6004|regulator of G-protein signaling 16##NM_002928|RGS16|6004|regulator of G-protein signaling 16##NM_001200050|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200051|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200052|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200056|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_030769|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC042003|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC034966|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK313225|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC058003|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK297017|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK301068|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AY336748|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	0.084239	
chr15	91499866	91500012	reg1005595.p1	13.507	+	TSC_hg19_v1_chr15_+_91498113 NM_001017919 NM_033544 BC140708 BC140709 BC094739	-1848	+	TSC_hg19_v1_chr15_+_91478539 AK000905 AK293538 BC037992 DQ892953 DQ896200 CU691534	-21385	+	TSC_hg19_v1_chr15_+_91478521 AB014729 AB014736 BC006214	-21412	+	BC064606 BC113826 TSC_hg19_v1_chr15_+_91499981	36	+	AF044588 BC003138 TSC_hg19_v1_chr15_-_91537766 AK297117 AK304094 BC005140 AK312600 NM_003981 NM_199413 NM_199414	37827	-	CU677627 TSC_hg19_v1_chr15_-_91565525	65563	-	NM_001017919|RCCD1|91433|RCC1 domain containing 1##NM_033544|RCCD1|91433|RCC1 domain containing 1##BC140708|RCCD1|91433|RCC1 domain containing 1##BC140709|RCCD1|91433|RCC1 domain containing 1##BC094739|RCCD1|91433|RCC1 domain containing 1##AK000905|UNC45A|55898|unc-45 homolog A (C. elegans)##AK293538|UNC45A|55898|unc-45 homolog A (C. elegans)##BC037992|UNC45A|55898|unc-45 homolog A (C. elegans)##DQ892953|UNC45A|55898|unc-45 homolog A (C. elegans)##DQ896200|UNC45A|55898|unc-45 homolog A (C. elegans)##AB014729|UNC45A|55898|unc-45 homolog A (C. elegans)##AB014736|UNC45A|55898|unc-45 homolog A (C. elegans)##BC006214|UNC45A|55898|unc-45 homolog A (C. elegans)##BC064606|RCCD1|91433|RCC1 domain containing 1##BC113826|RCCD1|91433|RCC1 domain containing 1##AF044588|PRC1|9055|protein regulator of cytokinesis 1##BC003138|PRC1|9055|protein regulator of cytokinesis 1##AK297117|PRC1|9055|protein regulator of cytokinesis 1##AK304094|PRC1|9055|protein regulator of cytokinesis 1##BC005140|PRC1|9055|protein regulator of cytokinesis 1##AK312600|PRC1|9055|protein regulator of cytokinesis 1##NM_003981|PRC1|9055|protein regulator of cytokinesis 1##NM_199413|PRC1|9055|protein regulator of cytokinesis 1##NM_199414|PRC1|9055|protein regulator of cytokinesis 1	0.997473	CTCF.p2:8:0.997
chr10	124325315	124325449	reg1006047.p1	13.506	+	AF159456 AJ000342 AJ243212 AJ243224 NM_004406 NM_007329 NM_017579 BC153299 AJ297935 AK304149 TSC_hg19_v1_chr10_+_124320269 AK304128	-5156	+	TSC_hg19_v1_chr10_+_124221068 AK091944 AX747270 NM_002775 AK092476 AK290089 BC011352 D87258 BC031082 Y07921 AB590567	-104306	+	BC066349 NM_001099667 BC090924	-111203	+	BC140922 BC065903 NM_001010912	133951	-	AY260047 AY260048 AY260049 AY260050 NM_022034	280308	-	BC031343 AK300849 NM_001204364 NM_152644	313734	-	AF159456|DMBT1|1755|deleted in malignant brain tumors 1##AJ000342|DMBT1|1755|deleted in malignant brain tumors 1##AJ243212|DMBT1|1755|deleted in malignant brain tumors 1##AJ243224|DMBT1|1755|deleted in malignant brain tumors 1##NM_004406|DMBT1|1755|deleted in malignant brain tumors 1##NM_007329|DMBT1|1755|deleted in malignant brain tumors 1##NM_017579|DMBT1|1755|deleted in malignant brain tumors 1##BC153299|DMBT1|1755|deleted in malignant brain tumors 1##AJ297935|DMBT1|1755|deleted in malignant brain tumors 1##AK304149|DMBT1|1755|deleted in malignant brain tumors 1##AK304128|DMBT1|1755|deleted in malignant brain tumors 1##AK091944|HTRA1|5654|HtrA serine peptidase 1##NM_002775|HTRA1|5654|HtrA serine peptidase 1##AK092476|HTRA1|5654|HtrA serine peptidase 1##AK290089|HTRA1|5654|HtrA serine peptidase 1##BC011352|HTRA1|5654|HtrA serine peptidase 1##D87258|HTRA1|5654|HtrA serine peptidase 1##BC031082|HTRA1|5654|HtrA serine peptidase 1##Y07921|HTRA1|5654|HtrA serine peptidase 1##BC066349|ARMS2|387715|age-related maculopathy susceptibility 2##NM_001099667|ARMS2|387715|age-related maculopathy susceptibility 2##BC090924|ARMS2|387715|age-related maculopathy susceptibility 2##BC140922|C10orf120|399814|chromosome 10 open reading frame 120##BC065903|C10orf120|399814|chromosome 10 open reading frame 120##NM_001010912|C10orf120|399814|chromosome 10 open reading frame 120##AY260047|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260048|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260049|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260050|CUZD1|50624|CUB and zona pellucida-like domains 1##NM_022034|CUZD1|50624|CUB and zona pellucida-like domains 1##BC031343|FAM24B|196792|family with sequence similarity 24, member B##AK300849|FAM24B-CUZD1|100533195|FAM24B-CUZD1 readthrough##NM_001204364|FAM24B|196792|family with sequence similarity 24, member B##NM_152644|FAM24B|196792|family with sequence similarity 24, member B	0.917937	CTCF.p2:4:0.918
chr1	17036412	17036536	reg1004279.p1	13.505	+	AK123337 TSC_hg19_v1_chr1_-_16971178	-65297	-	TSC_hg19_v1_chr1_-_16971175 AK090414	-65308	-	TSC_hg19_v1_chr1_-_16940046 AK123260 AY894575 NM_017940 BC066930 BC010124 BC082236 BC110431 AK055895 BC093404	-96578	-	TSC_hg19_v1_chr1_+_17248425 NM_014675	211960	+	TSC_hg19_v1_chr1_-_17307116 BC028033 AK222751 BC015039 NM_001135248 NM_002403	270675	-	AK301655 NM_001135247 NM_017459	271602	-	AK123337|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK123260|NBPF1|55672|neuroblastoma breakpoint family, member 1##AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_017940|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC066930|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC010124|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC110431|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK055895|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC093404|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_014675|CROCC|9696|ciliary rootlet coiled-coil, rootletin##BC028033|MFAP2|4237|microfibrillar-associated protein 2##AK222751|MFAP2|4237|microfibrillar-associated protein 2##BC015039|MFAP2|4237|microfibrillar-associated protein 2##NM_001135248|MFAP2|4237|microfibrillar-associated protein 2##NM_002403|MFAP2|4237|microfibrillar-associated protein 2##AK301655|MFAP2|4237|microfibrillar-associated protein 2##NM_001135247|MFAP2|4237|microfibrillar-associated protein 2##NM_017459|MFAP2|4237|microfibrillar-associated protein 2	0.837746	CTCF.p2:-13:0.838
chr14	74100245	74100387	reg1003851.p2	13.505	+	DQ082756 NM_001037162	-16769	+	BC090945 NM_152331	-41907	+	TSC_hg19_v1_chr14_+_74035979 DQ893488 DQ896406 BC004436 BC006500 L40401 AY005822 CU678722	-64319	+	NM_001201366 NM_031427 AF542071 BC005343 AL833654 AK315392	11337	+	CR457112 BC039577 AK290980 TSC_hg19_v1_chr14_-_74181085 AF320308 BC007712 NM_006029	80445	-	BC015668 TSC_hg19_v1_chr14_-_74226640	126322	-	DQ082756|ACOT6|641372|acyl-CoA thioesterase 6##NM_001037162|ACOT6|641372|acyl-CoA thioesterase 6##BC090945|ACOT4|122970|acyl-CoA thioesterase 4##NM_152331|ACOT4|122970|acyl-CoA thioesterase 4##DQ893488|ACOT2|10965|acyl-CoA thioesterase 2##DQ896406|ACOT2|10965|acyl-CoA thioesterase 2##BC004436|ACOT2|10965|acyl-CoA thioesterase 2##BC006500|ACOT2|10965|acyl-CoA thioesterase 2##L40401|ACOT2|10965|acyl-CoA thioesterase 2##AY005822|ACOT2|10965|acyl-CoA thioesterase 2##NM_001201366|DNAL1|83544|dynein, axonemal, light chain 1##NM_031427|DNAL1|83544|dynein, axonemal, light chain 1##AF542071|DNAL1|83544|dynein, axonemal, light chain 1##BC005343|DNAL1|83544|dynein, axonemal, light chain 1##AL833654|DNAL1|83544|dynein, axonemal, light chain 1##AK315392|DNAL1|83544|dynein, axonemal, light chain 1##CR457112|PNMA1|9240|paraneoplastic antigen MA1##BC039577|PNMA1|9240|paraneoplastic antigen MA1##AK290980|PNMA1|9240|paraneoplastic antigen MA1##AF320308|PNMA1|9240|paraneoplastic antigen MA1##BC007712|PNMA1|9240|paraneoplastic antigen MA1##NM_006029|PNMA1|9240|paraneoplastic antigen MA1##BC015668|C14orf43|91748|chromosome 14 open reading frame 43	0.989142	CTCF.p2:1:0.989
chr11	130934419	130934555	reg1003517.p1	13.504	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-148099	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-148142	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-615825	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	305982	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	846137	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	846852	+	NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin	0.18053	
chr1	151809040	151809146	reg1003629.p2	13.504	+	AK298460 TSC_hg19_v1_chr1_-_151804275 AB307696 CR457436 DQ890805 DQ893960 BC031554 AK223137 AK315662 BC110571 U16997 NM_005060	-4807	-	AL834219 NM_001001523 AK097994	-10534	-	BC137220 BC137221 AY358115 NM_001004432	-31282	-	AK293673 NM_001136003	3939	-	HQ258137 BC101610 BC112239 AK095283 NM_182578	17014	-	TSC_hg19_v1_chr1_-_151881935 AK314852 AJ313515 BC017339	72834	-	AK298460|RORC|6097|RAR-related orphan receptor C##AB307696|RORC|6097|RAR-related orphan receptor C##CR457436|RORC|6097|RAR-related orphan receptor C##DQ890805|RORC|6097|RAR-related orphan receptor C##DQ893960|RORC|6097|RAR-related orphan receptor C##BC031554|RORC|6097|RAR-related orphan receptor C##AK223137|RORC|6097|RAR-related orphan receptor C##AK315662|RORC|6097|RAR-related orphan receptor C##BC110571|RORC|6097|RAR-related orphan receptor C##U16997|RORC|6097|RAR-related orphan receptor C##NM_005060|RORC|6097|RAR-related orphan receptor C##AL834219|RORC|6097|RAR-related orphan receptor C##NM_001001523|RORC|6097|RAR-related orphan receptor C##AK097994|RORC|6097|RAR-related orphan receptor C##BC137220|LINGO4|339398|leucine rich repeat and Ig domain containing 4##BC137221|LINGO4|339398|leucine rich repeat and Ig domain containing 4##AY358115|LINGO4|339398|leucine rich repeat and Ig domain containing 4##NM_001004432|LINGO4|339398|leucine rich repeat and Ig domain containing 4##AK293673|C2CD4D|100191040|C2 calcium-dependent domain containing 4D##NM_001136003|C2CD4D|100191040|C2 calcium-dependent domain containing 4D##HQ258137|THEM5|284486|thioesterase superfamily member 5##BC101610|THEM5|284486|thioesterase superfamily member 5##BC112239|THEM5|284486|thioesterase superfamily member 5##AK095283|THEM5|284486|thioesterase superfamily member 5##NM_182578|THEM5|284486|thioesterase superfamily member 5##AK314852|THEM4|117145|thioesterase superfamily member 4##AJ313515|THEM4|117145|thioesterase superfamily member 4##BC017339|THEM4|117145|thioesterase superfamily member 4	0.997825	CTCF.p2:5:0.998
chr12	92963984	92964165	reg1001984.p1	13.504	+	AJ845168 NM_001025232	-142151	-	AJ845165 AJ845166 NM_001025233	-146340	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-424431	-	NM_001037671 NM_001178097	132544	+	NM_001004330 AK128530	166213	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	358864	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr16	10350795	10350908	reg1003798.p1	13.504	+	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	-74174	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	-74663	-	BC143273 U09002 NM_001134408	-75018	-	AK093414 AX748112 TSC_hg19_v1_chr16_+_10479917 AK296565 AK299040 BC033891 BC041882	129066	+	NM_024997 BC137079 BC144468	171889	+	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	323639	-	NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2	0.983442	CTCF.p2:-8:0.983
chr17	57830951	57831078	reg1004641.p1	13.504	+	TSC_hg19_v1_chr17_+_57785080 AK293664	-45941	+	AK294854 TSC_hg19_v1_chr17_+_57785025 AF214006 AX775965	-45979	+	BC009758 TSC_hg19_v1_chr17_+_57785014 AK024969	-45998	+	TSC_hg19_v1_chr17_+_57915291 AK310806	84292	+	AK024096 AK298492 AK301312 BC000258 AK022771 AK315172 NM_001193609 NM_001193610 NM_001193611 NM_001193612 NM_001193613 NM_016261	139177	-	NM_003161 BC036033 TSC_hg19_v1_chr17_+_57970481 AK293247	139448	+	AK293664|VMP1|81671|vacuole membrane protein 1##AK294854|VMP1|81671|vacuole membrane protein 1##AF214006|VMP1|81671|vacuole membrane protein 1##AX775965|VMP1|81671|vacuole membrane protein 1##BC009758|VMP1|81671|vacuole membrane protein 1##AK024969|VMP1|81671|vacuole membrane protein 1##AK024096|TUBD1|51174|tubulin, delta 1##AK298492|TUBD1|51174|tubulin, delta 1##AK301312|TUBD1|51174|tubulin, delta 1##BC000258|TUBD1|51174|tubulin, delta 1##AK022771|TUBD1|51174|tubulin, delta 1##AK315172|TUBD1|51174|tubulin, delta 1##NM_001193609|TUBD1|51174|tubulin, delta 1##NM_001193610|TUBD1|51174|tubulin, delta 1##NM_001193611|TUBD1|51174|tubulin, delta 1##NM_001193612|TUBD1|51174|tubulin, delta 1##NM_001193613|TUBD1|51174|tubulin, delta 1##NM_016261|TUBD1|51174|tubulin, delta 1##NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	0.738424	CTCF.p2:-22:0.738
chr2	46592133	46592277	reg1005821.p1	13.504	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	-67230	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	-67614	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-713131	+	NM_001145051	114498	+	BC034808 NM_080653	154890	-	TSC_hg19_v1_chr2_+_46769874 NM_012249 AK095329	177644	+	U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375##BC034808|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_080653|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_012249|RHOQ|23433|ras homolog gene family, member Q##AK095329|RHOQ|23433|ras homolog gene family, member Q	0.99268	CTCF.p2:4:0.993
chrX	135014179	135014295	reg1005061.p1	13.504	+	AJ278111 NM_018666 AK310412 BC144260	-38403	+	BC140913 BC144429 BC144430 BC140735 BC140926 BC144437 AK098689 AY743714 NM_001017438	-43045	-	BC144527 BC144528 AY743713 NM_001007551 NM_001172288	-60292	-	AB528252 AM393753 TSC_hg19_v1_chrX_-_135055928	41648	-	AL157477 BC033588 NM_173470 TSC_hg19_v1_chrX_-_135056148 AK312409 AK295829	41922	-	TSC_hg19_v1_chrX_+_135067627 NM_001177651 NM_001042537 NM_006359 AK300475 AK316255 AK314562 AF030409 BC035029	53365	+	AJ278111|SAGE1|55511|sarcoma antigen 1##NM_018666|SAGE1|55511|sarcoma antigen 1##AK310412|SAGE1|55511|sarcoma antigen 1##BC144260|SAGE1|55511|sarcoma antigen 1##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1##BC144429|CT45A5|441521|cancer/testis antigen family 45, member A5##BC144430|CT45A5|441521|cancer/testis antigen family 45, member A5##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##AK098689|CT45A4|441520|cancer/testis antigen family 45, member A4##AY743714|CT45A6|541465|cancer/testis antigen family 45, member A6##NM_001017438|CT45A6|541465|cancer/testis antigen family 45, member A6##BC144527|CT45A5|441521|cancer/testis antigen family 45, member A5##BC144528|CT45A5|441521|cancer/testis antigen family 45, member A5##AY743713|CT45A5|441521|cancer/testis antigen family 45, member A5##NM_001007551|CT45A5|441521|cancer/testis antigen family 45, member A5##NM_001172288|CT45A5|441521|cancer/testis antigen family 45, member A5##AM393753|MMGT1|93380|membrane magnesium transporter 1##AL157477|MMGT1|93380|membrane magnesium transporter 1##BC033588|MMGT1|93380|membrane magnesium transporter 1##NM_173470|MMGT1|93380|membrane magnesium transporter 1##AK312409|MMGT1|93380|membrane magnesium transporter 1##AK295829|MMGT1|93380|membrane magnesium transporter 1##NM_001177651|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##NM_001042537|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##NM_006359|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##AK300475|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##AK316255|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##AK314562|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##AF030409|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##BC035029|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6	0.957154	CTCF.p2:3:0.957
chr5	149509638	149509753	reg1003416.p1	13.503	+	NM_005211 X03663	-16761	-	TSC_hg19_v1_chr5_-_149466188 BC047521 AK304491 M25786	-43462	-	TSC_hg19_v1_chr5_-_149466131 AB208819	-43549	-	M21616 TSC_hg19_v1_chr5_-_149535251 AK293093	25509	-	J03278 M30493 TSC_hg19_v1_chr5_-_149535344	25640	-	BC032224 AB209657 NM_002609 TSC_hg19_v1_chr5_-_149535428	25729	-	NM_005211|CSF1R|1436|colony stimulating factor 1 receptor##X03663|CSF1R|1436|colony stimulating factor 1 receptor##BC047521|CSF1R|1436|colony stimulating factor 1 receptor##AK304491|CSF1R|1436|colony stimulating factor 1 receptor##M25786|CSF1R|1436|colony stimulating factor 1 receptor##AB208819|CSF1R|1436|colony stimulating factor 1 receptor##M21616|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AK293093|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##J03278|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##M30493|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##BC032224|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AB209657|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##NM_002609|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide	0.976102	CTCF.p2:-5:0.438	CTCF.p2:-17:0.538
chr17	48074067	48074186	reg1002817.p2	13.502	+	BC012361 BC028970 AK075167 TSC_hg19_v1_chr17_-_48072589 AK313257 NM_005220	-1548	-	NM_001934 U73328	-23997	+	U31762 TSC_hg19_v1_chr17_+_48049688	-24443	+	AK293323 AK303384 NM_002204 NM_005501 TSC_hg19_v1_chr17_+_48133350	59215	+	TSC_hg19_v1_chr17_+_48133357 AB209658 BC150190 BC015344	59320	+	AK055119 NM_001199898	97974	+	BC012361|DLX3|1747|distal-less homeobox 3##BC028970|DLX3|1747|distal-less homeobox 3##AK075167|DLX3|1747|distal-less homeobox 3##AK313257|DLX3|1747|distal-less homeobox 3##NM_005220|DLX3|1747|distal-less homeobox 3##NM_001934|DLX4|1748|distal-less homeobox 4##U73328|DLX4|1748|distal-less homeobox 4##U31762|DLX4|1748|distal-less homeobox 4##AK293323|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AK303384|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##NM_002204|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##NM_005501|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AB209658|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC150190|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC015344|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AK055119|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199898|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2	0.720273	CTCF.p2:-5:0.720
chr6	137962755	137962882	reg1003304.p2	13.501	+	BC051352 AK096362 NM_175747	-147293	-	TSC_hg19_v1_chr6_-_137540556 NM_000416	-422260	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-422273	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	225719	+	TSC_hg19_v1_chr6_-_138189314 AK124173	226532	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	465750	-	BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector	0.987316	CTCF.p2:9:0.987
chr1	205760843	205760963	reg1005230.p1	13.500	+	BC002585 BX647960 AK308359 TSC_hg19_v1_chr1_-_205744591 AK311085 AK313000 NM_001135662 NM_001135663 NM_001135664 NM_003929	-16325	-	TSC_hg19_v1_chr1_-_205719342 NM_022731	-41548	-	AK311186 TSC_hg19_v1_chr1_-_205719311	-41591	-	TSC_hg19_v1_chr1_-_205782160 AL831974 AL832001 AL832362 BX641054 NM_173854 BX648979	21264	-	TSC_hg19_v1_chr1_+_205782474 AK097788	21598	+	BC039170 BC063477 AK057131 AK290786 TSC_hg19_v1_chr1_-_205819261 NM_152491	58356	-	BC002585|RAB7L1|8934|RAB7, member RAS oncogene family-like 1##BX647960|RAB7L1|8934|RAB7, member RAS oncogene family-like 1##AK308359|RAB7L1|8934|RAB7, member RAS oncogene family-like 1##AK311085|RAB7L1|8934|RAB7, member RAS oncogene family-like 1##AK313000|RAB7L1|8934|RAB7, member RAS oncogene family-like 1##NM_001135662|RAB7L1|8934|RAB7, member RAS oncogene family-like 1##NM_001135663|RAB7L1|8934|RAB7, member RAS oncogene family-like 1##NM_001135664|RAB7L1|8934|RAB7, member RAS oncogene family-like 1##NM_003929|RAB7L1|8934|RAB7, member RAS oncogene family-like 1##NM_022731|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1##AL831974|SLC41A1|254428|solute carrier family 41, member 1##AL832001|SLC41A1|254428|solute carrier family 41, member 1##AL832362|SLC41A1|254428|solute carrier family 41, member 1##BX641054|SLC41A1|254428|solute carrier family 41, member 1##NM_173854|SLC41A1|254428|solute carrier family 41, member 1##BX648979|SLC41A1|254428|solute carrier family 41, member 1##BC039170|PM20D1|148811|peptidase M20 domain containing 1##BC063477|PM20D1|148811|peptidase M20 domain containing 1##AK057131|PM20D1|148811|peptidase M20 domain containing 1##AK290786|PM20D1|148811|peptidase M20 domain containing 1##NM_152491|PM20D1|148811|peptidase M20 domain containing 1	0.237293	CTCF.p2:-11:0.237
chr12	55582879	55583010	reg1005408.p1	13.500	+	BC136988 NM_001005243	-59436	+	NM_021191 AK314136	-169174	+	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	-204442	-	AB529271 NM_001005280	31864	+	BC140754 NM_001005490	58082	+	NM_001005493	106071	-	BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_021191|NEUROD4|58158|neurogenic differentiation 4##AK314136|NEUROD4|58158|neurogenic differentiation 4##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748##NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7##BC140754|OR6C74|254783|olfactory receptor, family 6, subfamily C, member 74##NM_001005490|OR6C74|254783|olfactory receptor, family 6, subfamily C, member 74##NM_001005493|OR6C6|283365|olfactory receptor, family 6, subfamily C, member 6	0.999323	CTCF.p2:-7:0.999
chr16	3216049	3216166	reg1004058.p1	13.500	+	CU675598 TSC_hg19_v1_chr16_-_3191371	-24748	-	TSC_hg19_v1_chr16_+_3185119 NM_001134655 BC007287 BC116445 AK291789 AK055337 AK289834	-30948	+	TSC_hg19_v1_chr16_+_3185058 NM_004220	-31055	+	BC069335 NM_012360 Y14442	38139	+	AK315036 BC032575 AF060866 TSC_hg19_v1_chr16_-_3285159 BC025293 BC012909 AK056010 NM_001145447 NM_003454	69021	-	Y14443 BC054005 NM_001145448 NM_198088 NM_001145446 NM_198087	69300	-	NM_001134655|ZNF213|7760|zinc finger protein 213##BC007287|ZNF213|7760|zinc finger protein 213##AK291789|ZNF213|7760|zinc finger protein 213##AK055337|ZNF213|7760|zinc finger protein 213##AK289834|ZNF213|7760|zinc finger protein 213##NM_004220|ZNF213|7760|zinc finger protein 213##BC069335|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##NM_012360|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##Y14442|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##AK315036|ZNF200|7752|zinc finger protein 200##BC032575|ZNF200|7752|zinc finger protein 200##AF060866|ZNF200|7752|zinc finger protein 200##BC025293|ZNF200|7752|zinc finger protein 200##BC012909|ZNF200|7752|zinc finger protein 200##AK056010|ZNF200|7752|zinc finger protein 200##NM_001145447|ZNF200|7752|zinc finger protein 200##NM_003454|ZNF200|7752|zinc finger protein 200##Y14443|ZNF200|7752|zinc finger protein 200##BC054005|ZNF200|7752|zinc finger protein 200##NM_001145448|ZNF200|7752|zinc finger protein 200##NM_198088|ZNF200|7752|zinc finger protein 200##NM_001145446|ZNF200|7752|zinc finger protein 200##NM_198087|ZNF200|7752|zinc finger protein 200	0.830068	CTCF.p2:21:0.830
chr5	140943872	140944016	reg1003705.p1	13.498	+	AL050086 TSC_hg19_v1_chr5_-_140895550	-48462	-	TSC_hg19_v1_chr5_+_140868721 BC112081 BC112083 AF152339 AF152526 NM_018929 NM_032407	-75180	+	TSC_hg19_v1_chr5_+_140864626 BC042650 AF152338 AF152525 BC101035 BC101037 BC101038 NM_018928 NM_032406 BC101036	-79260	+	AF051782 AY363395 AB384958 DQ067453 TSC_hg19_v1_chr5_-_140998497 BC117257 BC143413 BC143414	54554	-	TSC_hg19_v1_chr5_-_140998562 AB209482	54617	-	TSC_hg19_v1_chr5_-_140998564 AK304291	54620	-	AL050086|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC112081|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC112083|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152339|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152526|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_018929|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_032407|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF051782|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AY363395|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##DQ067453|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC117257|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143413|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143414|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AB209482|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AK304291|DIAPH1|1729|diaphanous homolog 1 (Drosophila)	1.232359	CTCF.p2:24:0.987	CTCF.p2:-97:0.246
chr7	36527495	36527618	reg1005206.p1	13.498	+	BC028678 NM_001100425	-97842	-	TSC_hg19_v1_chr7_+_36429470 BC070066 NM_018685 AK299803 AK291254 AF273437	-98116	+	TSC_hg19_v1_chr7_-_36406811 BC056191 AB384038 BC136362 BC144032 AB020702 BC110422 NM_001199707 AK293912 AK294686 AK302559 NM_001199706 NM_015314 NM_001199708	-120884	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	236520	-	BC064635 NM_001039459	497134	-	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	498164	-	BC028678|KIAA0895|23366|KIAA0895##NM_001100425|KIAA0895|23366|KIAA0895##BC070066|ANLN|54443|anillin, actin binding protein##NM_018685|ANLN|54443|anillin, actin binding protein##AK299803|ANLN|54443|anillin, actin binding protein##AK291254|ANLN|54443|anillin, actin binding protein##AF273437|ANLN|54443|anillin, actin binding protein##BC056191|KIAA0895|23366|KIAA0895##BC136362|KIAA0895|23366|KIAA0895##BC144032|KIAA0895|23366|KIAA0895##AB020702|KIAA0895|23366|KIAA0895##BC110422|KIAA0895|23366|KIAA0895##NM_001199707|KIAA0895|23366|KIAA0895##AK293912|KIAA0895|23366|KIAA0895##AK294686|KIAA0895|23366|KIAA0895##AK302559|KIAA0895|23366|KIAA0895##NM_001199706|KIAA0895|23366|KIAA0895##NM_015314|KIAA0895|23366|KIAA0895##NM_001199708|KIAA0895|23366|KIAA0895##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1	0.191312	
chrX	12965027	12965155	reg1003829.p1	13.498	+	AK314240 NM_138636 AF246971 AY358296 BC101074 BC101075 BC101076 BC101077 AF245703	-40334	+	AK313858 BC033651 NM_016562 AF240467 AF245702	-79893	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	-155523	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	28149	+	TSC_hg19_v1_chrX_+_12994293 BC104464 BC104465 BT007090 X02493	29252	+	BX647580 AK313776 AF494345 BX648111 BX648919 NM_174901	97727	-	AK314240|TLR8|51311|toll-like receptor 8##NM_138636|TLR8|51311|toll-like receptor 8##AF246971|TLR8|51311|toll-like receptor 8##AY358296|TLR8|51311|toll-like receptor 8##BC101074|TLR8|51311|toll-like receptor 8##BC101075|TLR8|51311|toll-like receptor 8##BC101076|TLR8|51311|toll-like receptor 8##BC101077|TLR8|51311|toll-like receptor 8##AF245703|TLR8|51311|toll-like receptor 8##AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked##BC104464|TMSB4X|7114|thymosin beta 4, X-linked##BC104465|TMSB4X|7114|thymosin beta 4, X-linked##BT007090|TMSB4X|7114|thymosin beta 4, X-linked##X02493|TMSB4X|7114|thymosin beta 4, X-linked##BX647580|FAM9C|171484|family with sequence similarity 9, member C##AK313776|FAM9C|171484|family with sequence similarity 9, member C##AF494345|FAM9C|171484|family with sequence similarity 9, member C##BX648111|FAM9C|171484|family with sequence similarity 9, member C##BX648919|FAM9C|171484|family with sequence similarity 9, member C##NM_174901|FAM9C|171484|family with sequence similarity 9, member C	1.456721	CTCF.p2:4:0.986	CTCF.p2:-42:0.471
chr1	60225239	60225356	reg1003967.p2	13.497	+	NM_001244714 AK054842	-449544	+	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	-462685	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-975562	-	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	55355	+	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	167088	-	BC032594 TSC_hg19_v1_chr1_-_60392478	167172	-	NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2	0.982426	CTCF.p2:16:0.982
chr1	244960238	244960379	reg1005419.p1	13.496	+	TSC_hg19_v1_chr1_+_244816472 AF151904 AF229834	-143787	+	TSC_hg19_v1_chr1_+_244816428 BC004485 BC020640	-143900	+	AK314664 TSC_hg19_v1_chr1_+_244816381	-143927	+	TSC_hg19_v1_chr1_+_244998628 AK125259 NM_198076	38401	+	TSC_hg19_v1_chr1_+_244998959 AK130498 BC062419 BC018519	38632	+	TSC_hg19_v1_chr1_+_244998992 AK000866 BC095486 AK300760 BC064399 AF086182	38678	+	AF151904|PPPDE1|51029|PPPDE peptidase domain containing 1##AF229834|PPPDE1|51029|PPPDE peptidase domain containing 1##BC004485|PPPDE1|51029|PPPDE peptidase domain containing 1##BC020640|PPPDE1|51029|PPPDE peptidase domain containing 1##AK314664|PPPDE1|51029|PPPDE peptidase domain containing 1##AK125259|FAM36A|116228|family with sequence similarity 36, member A##NM_198076|FAM36A|116228|family with sequence similarity 36, member A##AK130498|FAM36A|116228|family with sequence similarity 36, member A##BC062419|FAM36A|116228|family with sequence similarity 36, member A##BC018519|FAM36A|116228|family with sequence similarity 36, member A##AK000866|FAM36A|116228|family with sequence similarity 36, member A##BC095486|FAM36A|116228|family with sequence similarity 36, member A##AK300760|FAM36A|116228|family with sequence similarity 36, member A##BC064399|FAM36A|116228|family with sequence similarity 36, member A##AF086182|FAM36A|116228|family with sequence similarity 36, member A	0.983114	CTCF.p2:0:0.983
chr13	75793981	75794121	reg1003255.p2	13.496	+	TSC_hg19_v1_chr13_-_74708425 AK291397	-1085655	-	AF161471 AF113122 NM_007249	-1086062	-	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-2160847	+	CR749622 TSC_hg19_v1_chr13_-_75901948	107871	-	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	262287	-	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	317927	-	AK291397|KLF12|11278|Kruppel-like factor 12##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##CR749622|TBC1D4|9882|TBC1 domain family, member 4##AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6	0.998209	CTCF.p2:-1:0.998
chr3	18600999	18601122	reg1005562.p1	13.496	+	BC001744 NM_001131010	-120827	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	-134263	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-816893	-	AK295633 AY053503 NM_144633 AB209053 AK309034	588944	+	BC028198 AK097644 NM_144715	1374628	-	TSC_hg19_v1_chr3_+_19988586 NM_004162	1387629	+	BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##BC028198|EFHB|151651|EF-hand domain family, member B##AK097644|EFHB|151651|EF-hand domain family, member B##NM_144715|EFHB|151651|EF-hand domain family, member B##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family	0.499535	CTCF.p2:4:0.500
chr9	69770646	69770764	reg1005311.p1	13.496	+	AL136793 NM_001098805	-388725	+	AF265442 BC069006 AK293173 NM_001085457	-508151	-	NM_001085476	-568502	-	NM_001126334	408109	-	NM_001099279 NM_199244	659025	-	CU688346 TSC_hg19_v1_chr9_-_70490092	719376	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.228611	CTCF.p2:-2:0.229
chr17	77944631	77944741	reg1004189.p1	13.495	+	BC044939 TSC_hg19_v1_chr17_+_77893233	-51487	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	-131544	-	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-173779	-	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	64916	-	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	65762	+	TSC_hg19_v1_chr17_+_78075349 NM_000152 NM_001079803 NM_001079804	130640	+	AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40##NM_000152|GAA|2548|glucosidase, alpha; acid##NM_001079803|GAA|2548|glucosidase, alpha; acid##NM_001079804|GAA|2548|glucosidase, alpha; acid	0.855728	CTCF.p2:15:0.856
chr12	48191381	48191500	reg1004079.p1	13.494	+	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-24406	+	AK092448 NM_001098531	-38566	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	-39031	-	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	22224	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	107361	-	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	165898	+	NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C	0.918406	CTCF.p2:-12:0.918
chr7	25299400	25299519	reg1003508.p1	13.494	+	AB040290 AF330057 AF440392 NM_022150	-31379	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-79588	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-134519	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	892474	+	TSC_hg19_v1_chr7_-_26232151 BX538099	932692	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	940882	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.407578	CTCF.p2:-7:0.408
chr9	134466694	134466808	reg1004133.p1	13.494	+	AK057848 TSC_hg19_v1_chr9_-_134406625 BC091495 BC015547 AK022317 NM_001135954 NM_031432	-60101	-	TSC_hg19_v1_chr9_-_134406578 AF254133 CR457281 CU677347 AF237290 AF125106 AK295471 AK307475	-60204	-	AK315218 TSC_hg19_v1_chr9_+_134378402 AK293529 BC022877	-88316	+	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	118451	-	D21239 NM_005312	146173	-	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	148539	-	AK057848|UCK1|83549|uridine-cytidine kinase 1##BC091495|UCK1|83549|uridine-cytidine kinase 1##BC015547|UCK1|83549|uridine-cytidine kinase 1##AK022317|UCK1|83549|uridine-cytidine kinase 1##NM_001135954|UCK1|83549|uridine-cytidine kinase 1##NM_031432|UCK1|83549|uridine-cytidine kinase 1##AF254133|UCK1|83549|uridine-cytidine kinase 1##CR457281|UCK1|83549|uridine-cytidine kinase 1##AF237290|UCK1|83549|uridine-cytidine kinase 1##AF125106|UCK1|83549|uridine-cytidine kinase 1##AK295471|UCK1|83549|uridine-cytidine kinase 1##AK307475|UCK1|83549|uridine-cytidine kinase 1##AK315218|POMT1|10585|protein-O-mannosyltransferase 1##AK293529|POMT1|10585|protein-O-mannosyltransferase 1##BC022877|POMT1|10585|protein-O-mannosyltransferase 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1	1.028309	CTCF.p2:-13:0.999
chr11	34009648	34009774	reg1005720.p1	13.493	+	NM_005574 X61118	-95876	-	TSC_hg19_v1_chr11_-_33891485 NM_001142315	-118215	-	BC042426 TSC_hg19_v1_chr11_-_33891402 BC034041 NM_001142316	-118320	-	TSC_hg19_v1_chr11_+_34073238 BC001731 NM_005898 NM_203364	63502	+	TSC_hg19_v1_chr11_+_34073889 AK299720	64193	+	TSC_hg19_v1_chr11_+_34073950 Z48042	64226	+	NM_005574|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##X61118|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142315|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC042426|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC034041|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142316|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC001731|CAPRIN1|4076|cell cycle associated protein 1##NM_005898|CAPRIN1|4076|cell cycle associated protein 1##NM_203364|CAPRIN1|4076|cell cycle associated protein 1##AK299720|CAPRIN1|4076|cell cycle associated protein 1##Z48042|CAPRIN1|4076|cell cycle associated protein 1	0.047673	
chr14	52766550	52766663	reg1003784.p1	13.492	+	BC040968 NM_000953 AB464671 EF577397	-32125	+	NM_007361 TSC_hg19_v1_chr14_-_52536023	-230621	-	BC035608 TSC_hg19_v1_chr14_-_52535777 AK291652	-230832	-	TSC_hg19_v1_chr14_+_52781029 NM_000956 U19487 BC093927 BC093929 AY275471 X83868	14529	+	TSC_hg19_v1_chr14_-_53019222 AK097748 BC137081 BC137082 BC144469 AB037765 BC152428 BC150205 BC142650 NM_001160047 NM_020784	252566	-	NM_001099652 AY255590 AK123953 AL834372	253329	+	BC040968|PTGDR|5729|prostaglandin D2 receptor (DP)##NM_000953|PTGDR|5729|prostaglandin D2 receptor (DP)##EF577397|PTGDR|5729|prostaglandin D2 receptor (DP)##NM_007361|NID2|22795|nidogen 2 (osteonidogen)##BC035608|NID2|22795|nidogen 2 (osteonidogen)##AK291652|NID2|22795|nidogen 2 (osteonidogen)##NM_000956|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##U19487|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##BC093927|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##BC093929|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##AY275471|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##X83868|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##AK097748|TXNDC16|57544|thioredoxin domain containing 16##BC137081|TXNDC16|57544|thioredoxin domain containing 16##BC137082|TXNDC16|57544|thioredoxin domain containing 16##BC144469|TXNDC16|57544|thioredoxin domain containing 16##AB037765|TXNDC16|57544|thioredoxin domain containing 16##BC152428|TXNDC16|57544|thioredoxin domain containing 16##BC150205|TXNDC16|57544|thioredoxin domain containing 16##BC142650|TXNDC16|57544|thioredoxin domain containing 16##NM_001160047|TXNDC16|57544|thioredoxin domain containing 16##NM_020784|TXNDC16|57544|thioredoxin domain containing 16##NM_001099652|GPR137C|283554|G protein-coupled receptor 137C##AY255590|GPR137C|283554|G protein-coupled receptor 137C##AK123953|GPR137C|283554|G protein-coupled receptor 137C##AL834372|GPR137C|283554|G protein-coupled receptor 137C	0.184907	
chr5	1654117	1654245	reg1003747.p2	13.492	+	TSC_hg19_v1_chr5_-_1634100 BC019918 BC045555 AK311210 AK311251	-20063	-	TSC_hg19_v1_chr5_-_1634097 BC020552 BC053586 BC044220 AK308990 AK315872 BC067863 BC014604 AK307076	-20112	-	TSC_hg19_v1_chr5_-_1594617 BC150558	-59550	-	TSC_hg19_v1_chr5_-_1799926 AB049654 AF151109 AF155653 BC020642	145742	-	TSC_hg19_v1_chr5_-_1799952 AK312001 BC104652 EF036487 NM_032479	145791	-	TSC_hg19_v1_chr5_+_1801520 NM_004553 AK022503 BC038664 AF044959 BC046155 CR456880 HQ257915	147331	+	BC019918|LOC728613|728613|programmed cell death 6 pseudogene##BC045555|LOC728613|728613|programmed cell death 6 pseudogene##AK311210|LOC728613|728613|programmed cell death 6 pseudogene##BC020552|LOC728613|728613|programmed cell death 6 pseudogene##BC053586|LOC728613|728613|programmed cell death 6 pseudogene##BC044220|LOC728613|728613|programmed cell death 6 pseudogene##AK308990|LOC728613|728613|programmed cell death 6 pseudogene##BC067863|LOC728613|728613|programmed cell death 6 pseudogene##BC014604|LOC728613|728613|programmed cell death 6 pseudogene##AK307076|LOC728613|728613|programmed cell death 6 pseudogene##BC150558|SDHAP3|728609|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3##AB049654|MRPL36|64979|mitochondrial ribosomal protein L36##AF151109|MRPL36|64979|mitochondrial ribosomal protein L36##AF155653|MRPL36|64979|mitochondrial ribosomal protein L36##BC020642|MRPL36|64979|mitochondrial ribosomal protein L36##AK312001|MRPL36|64979|mitochondrial ribosomal protein L36##BC104652|MRPL36|64979|mitochondrial ribosomal protein L36##EF036487|MRPL36|64979|mitochondrial ribosomal protein L36##NM_032479|MRPL36|64979|mitochondrial ribosomal protein L36##NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	0.841806	CTCF.p2:15:0.842
chr11	116603557	116603680	reg1005938.p1	13.491	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-1228438	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-1514970	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-2054370	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	40080	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	55097	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	55120	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.924786	CTCF.p2:-2:0.925
chr13	47067196	47067336	reg1004663.p1	13.491	+	AK125950 TSC_hg19_v1_chr13_-_47012386	-54906	-	NM_025113	-105632	-	TSC_hg19_v1_chr13_-_46961379 AK025215 AK293034	-105882	-	NM_001164211 NM_001164213 NM_015116 TSC_hg19_v1_chr13_+_47127304 AY050631 AY050632 AK309937	60036	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	60057	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	60154	+	AK125950|KIAA0226L|80183|KIAA0226-like##NM_025113|KIAA0226L|80183|KIAA0226-like##AK025215|KIAA0226L|80183|KIAA0226-like##AK293034|KIAA0226L|80183|KIAA0226-like##NM_001164211|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##NM_001164213|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##NM_015116|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AY050631|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AY050632|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK309937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1	1.046853	CTCF.p2:-3:0.999
chr7	39785909	39786025	reg1003916.p2	13.491	+	TSC_hg19_v1_chr7_+_39773192 BC038571	-12735	+	TSC_hg19_v1_chr7_+_39663298 AK308109	-122659	+	TSC_hg19_v1_chr7_+_39663204 BC039858	-122756	+	TSC_hg19_v1_chr7_+_39989642 BC080601	203659	+	BC064414 TSC_hg19_v1_chr7_+_39989879	203917	+	TSC_hg19_v1_chr7_+_39989958 AK092534 NM_003718 NM_031267	203992	+	BC038571|LINC00265|349114|long intergenic non-protein coding RNA 265##AK308109|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##BC080601|CDK13|8621|cyclin-dependent kinase 13##AK092534|CDK13|8621|cyclin-dependent kinase 13##NM_003718|CDK13|8621|cyclin-dependent kinase 13##NM_031267|CDK13|8621|cyclin-dependent kinase 13	0.933404	CTCF.p2:0:0.933
chr16	58054715	58054846	reg1005090.p1	13.489	+	TSC_hg19_v1_chr16_+_58035310 AK293220 AK298473 AK303121 BC010099 AK301494 BC004415 BC007774 BC006291 BC021554	-19448	+	NM_001195302 NM_001204911 NM_024598 TSC_hg19_v1_chr16_+_58035304 AK023216	-19489	+	AB037809 NM_020807	-21019	-	NM_002428	4501	+	BC036495 BC055428 TSC_hg19_v1_chr16_+_58059491	4702	+	TSC_hg19_v1_chr16_-_58163283 AK027099 AK297819 BC005152 AF087845 AF093680	108452	-	AK293220|C16orf57|79650|chromosome 16 open reading frame 57##AK298473|C16orf57|79650|chromosome 16 open reading frame 57##AK303121|C16orf57|79650|chromosome 16 open reading frame 57##BC010099|C16orf57|79650|chromosome 16 open reading frame 57##AK301494|C16orf57|79650|chromosome 16 open reading frame 57##BC004415|C16orf57|79650|chromosome 16 open reading frame 57##BC007774|C16orf57|79650|chromosome 16 open reading frame 57##BC006291|C16orf57|79650|chromosome 16 open reading frame 57##BC021554|C16orf57|79650|chromosome 16 open reading frame 57##NM_001195302|C16orf57|79650|chromosome 16 open reading frame 57##NM_001204911|C16orf57|79650|chromosome 16 open reading frame 57##NM_024598|C16orf57|79650|chromosome 16 open reading frame 57##AK023216|C16orf57|79650|chromosome 16 open reading frame 57##AB037809|ZNF319|57567|zinc finger protein 319##NM_020807|ZNF319|57567|zinc finger protein 319##NM_002428|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##BC036495|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##BC055428|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##AK027099|C16orf80|29105|chromosome 16 open reading frame 80##AK297819|C16orf80|29105|chromosome 16 open reading frame 80##BC005152|C16orf80|29105|chromosome 16 open reading frame 80##AF087845|C16orf80|29105|chromosome 16 open reading frame 80##AF093680|C16orf80|29105|chromosome 16 open reading frame 80	0.999266	CTCF.p2:-25:0.999
chr19	41168795	41168910	reg1001637.p1	13.489	+	AK304612 TSC_hg19_v1_chr19_+_41120049	-48794	+	TSC_hg19_v1_chr19_+_41119819 AF054501	-49004	+	TSC_hg19_v1_chr19_+_41119492 AK074499	-49363	+	BC016160 BC144583 TSC_hg19_v1_chr19_-_41196558 AK289398 NM_004756	27641	-	BC027473 TSC_hg19_v1_chr19_-_41220989	52131	-	TSC_hg19_v1_chr19_-_41220999 NM_001142555	52163	-	AK304612|LTBP4|8425|latent transforming growth factor beta binding protein 4##AF054501|LTBP4|8425|latent transforming growth factor beta binding protein 4##AK074499|LTBP4|8425|latent transforming growth factor beta binding protein 4##BC016160|NUMBL|9253|numb homolog (Drosophila)-like##BC144583|NUMBL|9253|numb homolog (Drosophila)-like##AK289398|NUMBL|9253|numb homolog (Drosophila)-like##NM_004756|NUMBL|9253|numb homolog (Drosophila)-like##BC027473|ADCK4|79934|aarF domain containing kinase 4##NM_001142555|ADCK4|79934|aarF domain containing kinase 4	0.984094	CTCF.p2:-17:0.984
chr2	55395824	55395936	reg1004142.p1	13.489	+	TSC_hg19_v1_chr2_-_55277709 AY123246 NM_020532 NM_153828 NM_207520	-118165	-	TSC_hg19_v1_chr2_-_55277672 AB040462 AB040463 AY102277 AY102278 AY102279 BC016165 BC068991 BC150182 BC152555	-118198	-	TSC_hg19_v1_chr2_-_55277661 AK075039	-118218	-	NM_001135592	63158	+	AK315683 TSC_hg19_v1_chr2_-_55459408 AK056000 BC029502 NM_152385	63547	-	NM_002954	63660	+	AY123246|RTN4|57142|reticulon 4##NM_020532|RTN4|57142|reticulon 4##NM_153828|RTN4|57142|reticulon 4##NM_207520|RTN4|57142|reticulon 4##AB040462|RTN4|57142|reticulon 4##AB040463|RTN4|57142|reticulon 4##AY102277|RTN4|57142|reticulon 4##AY102278|RTN4|57142|reticulon 4##AY102279|RTN4|57142|reticulon 4##BC016165|RTN4|57142|reticulon 4##BC068991|RTN4|57142|reticulon 4##BC150182|RTN4|57142|reticulon 4##BC152555|RTN4|57142|reticulon 4##AK075039|RTN4|57142|reticulon 4##NM_001135592|RPS27A|6233|ribosomal protein S27a##AK315683|C2orf63|130162|chromosome 2 open reading frame 63##AK056000|C2orf63|130162|chromosome 2 open reading frame 63##BC029502|C2orf63|130162|chromosome 2 open reading frame 63##NM_152385|C2orf63|130162|chromosome 2 open reading frame 63##NM_002954|RPS27A|6233|ribosomal protein S27a	0.696312	CTCF.p2:15:0.696
chr4	108951642	108951761	reg1004068.p1	13.489	+	TSC_hg19_v1_chr4_+_108911045 BC000306 AM392952 AM393255 DQ891419 DQ894593 AB528829 AF001902	-40628	+	AK314444 TSC_hg19_v1_chr4_+_108911011	-40689	+	AF001903 NM_001184705 NM_005327 TSC_hg19_v1_chr4_+_108910984 X96752	-40765	+	AK303272 NM_001166119	136213	-	TSC_hg19_v1_chr4_+_109088684 BC020624	136983	+	TSC_hg19_v1_chr4_-_109090113 AF288571 AK225772 NM_001130713 NM_001130714 NM_016269	138098	-	BC000306|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ891419|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ894593|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001902|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK314444|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001903|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_001184705|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_005327|HADH|3033|hydroxyacyl-CoA dehydrogenase##X96752|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK303272|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1##BC020624|LOC641518|641518|uncharacterized LOC641518##AF288571|LEF1|51176|lymphoid enhancer-binding factor 1##AK225772|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1##NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1	0.0	
chr7	126540197	126540320	reg1004931.p1	13.489	+	NM_001042594 NM_015450	-1970222	-	BC130600 BC130604 NM_001024603	-2109456	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	-2134462	-	NM_000845	343310	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	352107	-	TSC_hg19_v1_chr7_-_126893165 AK290197	352894	-	NM_001042594|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_015450|POT1|25913|protection of telomeres 1 homolog (S. pombe)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##AK290197|GRM8|2918|glutamate receptor, metabotropic 8	0.999924	CTCF.p2:2:1.000
chr8	142185122	142185242	reg1003693.p1	13.487	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-46445	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-173926	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-539558	-	AK128212 NM_001080431	53490	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	79008	-	NM_005293	192182	-	NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.902239	CTCF.p2:7:0.902
chrX	14050621	14050760	reg1004478.p1	13.487	+	BC003607 AK000521 BC014324 BC020785 NM_001042479 NM_001042480 NM_017856	-2694	-	TSC_hg19_v1_chrX_-_13956758 AB209525 U45955 NM_001001994	-93862	-	TSC_hg19_v1_chrX_-_13956533 AK294314	-94159	-	AK312591 NM_001118885 NM_001118886 NM_001171942 NM_002063 AK297304	496760	+	TSC_hg19_v1_chrX_-_14891182 BC136558 BC136560 BC043596 BC055411 NM_001018113 NM_152633 AK091383 AX746948	840485	-	NM_152581 TSC_hg19_v1_chrX_+_14891582 BC030641 AL832230 AK315781	840866	+	BC003607|GEMIN8|54960|gem (nuclear organelle) associated protein 8##AK000521|GEMIN8|54960|gem (nuclear organelle) associated protein 8##BC014324|GEMIN8|54960|gem (nuclear organelle) associated protein 8##BC020785|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_001042479|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_001042480|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_017856|GEMIN8|54960|gem (nuclear organelle) associated protein 8##AB209525|GPM6B|2824|glycoprotein M6B##U45955|GPM6B|2824|glycoprotein M6B##NM_001001994|GPM6B|2824|glycoprotein M6B##AK294314|GPM6B|2824|glycoprotein M6B##AK312591|GLRA2|2742|glycine receptor, alpha 2##NM_001118885|GLRA2|2742|glycine receptor, alpha 2##NM_001118886|GLRA2|2742|glycine receptor, alpha 2##NM_001171942|GLRA2|2742|glycine receptor, alpha 2##NM_002063|GLRA2|2742|glycine receptor, alpha 2##AK297304|GLRA2|2742|glycine receptor, alpha 2##BC136558|FANCB|2187|Fanconi anemia, complementation group B##BC136560|FANCB|2187|Fanconi anemia, complementation group B##BC043596|FANCB|2187|Fanconi anemia, complementation group B##BC055411|FANCB|2187|Fanconi anemia, complementation group B##NM_001018113|FANCB|2187|Fanconi anemia, complementation group B##NM_152633|FANCB|2187|Fanconi anemia, complementation group B##AK091383|FANCB|2187|Fanconi anemia, complementation group B##NM_152581|MOSPD2|158747|motile sperm domain containing 2##BC030641|MOSPD2|158747|motile sperm domain containing 2##AL832230|MOSPD2|158747|motile sperm domain containing 2##AK315781|MOSPD2|158747|motile sperm domain containing 2	0.999746	CTCF.p2:27:1.000
chr16	30609592	30609707	reg1004358.p1	13.486	+	TSC_hg19_v1_chr16_-_30597103 AK309511 EU446576 AK292465 BC040642 AK298848 AK056692 NM_152458	-12674	-	NM_001024683 NM_145271	-25922	-	EU446577 TSC_hg19_v1_chr16_-_30583034 BC018997	-26627	-	AK310459 AB065282 BC014000 NM_138447 TSC_hg19_v1_chr16_-_30621684	12007	-	TSC_hg19_v1_chr16_+_30662098 CR936781 AK125716	52451	+	TSC_hg19_v1_chr16_+_30662286 BC010232 BC050677 NM_024031 BC011573 BC000119 AK074783	52616	+	AK309511|ZNF785|146540|zinc finger protein 785##EU446576|ZNF785|146540|zinc finger protein 785##AK292465|ZNF785|146540|zinc finger protein 785##BC040642|ZNF785|146540|zinc finger protein 785##AK298848|ZNF785|146540|zinc finger protein 785##AK056692|ZNF785|146540|zinc finger protein 785##NM_152458|ZNF785|146540|zinc finger protein 785##NM_001024683|ZNF688|146542|zinc finger protein 688##NM_145271|ZNF688|146542|zinc finger protein 688##EU446577|ZNF688|146542|zinc finger protein 688##BC018997|ZNF688|146542|zinc finger protein 688##AK310459|ZNF689|115509|zinc finger protein 689##AB065282|ZNF689|115509|zinc finger protein 689##BC014000|ZNF689|115509|zinc finger protein 689##NM_138447|ZNF689|115509|zinc finger protein 689##CR936781|PRR14|78994|proline rich 14##AK125716|PRR14|78994|proline rich 14##BC010232|PRR14|78994|proline rich 14##BC050677|PRR14|78994|proline rich 14##NM_024031|PRR14|78994|proline rich 14##BC011573|PRR14|78994|proline rich 14##BC000119|PRR14|78994|proline rich 14##AK074783|PRR14|78994|proline rich 14	0.881516	CTCF.p2:11:0.882
chr2	228631134	228631264	reg1003173.p1	13.486	+	AF271633 BC032014 AK301490 AF283317 AK312464 NM_025243	-48478	-	AM393148 AM393273 BC131618 AL359944 CR749679 AK055355 NM_001162483 NM_020161	-133281	-	TSC_hg19_v1_chr2_+_228356287 AK295030	-274908	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	47392	+	AK097409 NM_178821 BC036377 AK098821 AK301861	105153	+	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	415163	-	AF271633|SLC19A3|80704|solute carrier family 19, member 3##BC032014|SLC19A3|80704|solute carrier family 19, member 3##AK301490|SLC19A3|80704|solute carrier family 19, member 3##AF283317|SLC19A3|80704|solute carrier family 19, member 3##AK312464|SLC19A3|80704|solute carrier family 19, member 3##NM_025243|SLC19A3|80704|solute carrier family 19, member 3##AM393148|C2orf83|56918|chromosome 2 open reading frame 83##AM393273|C2orf83|56918|chromosome 2 open reading frame 83##BC131618|C2orf83|56918|chromosome 2 open reading frame 83##AL359944|C2orf83|56918|chromosome 2 open reading frame 83##CR749679|C2orf83|56918|chromosome 2 open reading frame 83##AK055355|C2orf83|56918|chromosome 2 open reading frame 83##NM_001162483|C2orf83|56918|chromosome 2 open reading frame 83##NM_020161|C2orf83|56918|chromosome 2 open reading frame 83##AK295030|AGFG1|3267|ArfGAP with FG repeats 1##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing	0.999207	CTCF.p2:8:0.999
chr1	143656238	143656390	reg1004022.p1	13.485	+	TSC_hg19_v1_chr1_-_143467618 BC070106	-188689	-	CR936796 TSC_hg19_v1_chr1_+_142618815 AK056396 AF277188	-1037468	+	AK291502 AK307244 AK311502 NM_001004340 NM_001017986 NM_001244910 TSC_hg19_v1_chr1_-_120935945	-22720362	-	BC071624 BC132962 AK097058 AK310056 TSC_hg19_v1_chr1_-_143744413 AK310186 AK309393	88091	-	HQ258079 BC130376 BC130378 NM_001123068	111550	-	AK307197 TSC_hg19_v1_chr1_-_143913122 AB096683 NM_207418	256816	-	AK291502|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK307244|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK311502|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001004340|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001017986|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001244910|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##BC071624|FLJ39739|388685|uncharacterized FLJ39739##BC132962|LOC100286793|100286793|uncharacterized LOC100286793##AK097058|FLJ39739|388685|uncharacterized FLJ39739##AK310056|FLJ39739|388685|uncharacterized FLJ39739##AK310186|FLJ39739|388685|uncharacterized FLJ39739##AK309393|FLJ39739|388685|uncharacterized FLJ39739##HQ258079|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##NM_001123068|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##AK307197|FAM72D|728833|family with sequence similarity 72, member D##AB096683|FAM72D|728833|family with sequence similarity 72, member D##NM_207418|FAM72D|728833|family with sequence similarity 72, member D	0.751704	CTCF.p2:-8:0.752
chr14	64237039	64237155	reg1004130.p1	13.485	+	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	-42348	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	-128535	-	BX248008 NM_001008726	-128973	-	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	82598	+	NM_182913 AY061758 AK297874	443780	+	NM_182910	445574	+	AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##BX248008|WDR89|112840|WD repeat domain 89##NM_001008726|WDR89|112840|WD repeat domain 89##NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2	0.989275	CTCF.p2:8:0.989
chr8	142357119	142357257	reg1005809.p1	13.484	+	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	-92998	-	AK128212 NM_001080431	-118516	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-218451	+	NM_005293	20176	-	TSC_hg19_v1_chr8_+_142402120 AK311257	44946	+	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	74873	+	BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##NM_005293|GPR20|2843|G protein-coupled receptor 20##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3	0.999858	CTCF.p2:16:1.000
chrX	37604758	37604864	reg1003575.p1	13.484	+	AY534238 TSC_hg19_v1_chrX_+_37545043 BC036019 NM_021083 Z32684	-59741	+	TSC_hg19_v1_chrX_+_37431024 BC093667 BC093669 BC143528	-173780	+	AK124915 NM_001170331 NM_198511 TSC_hg19_v1_chrX_+_37430917	-173941	+	TSC_hg19_v1_chrX_+_37639284 NM_000397 AK289753 BC032720	34459	+	TSC_hg19_v1_chrX_+_37639311 AK304033 AK301491 AK312929 AK301476 X04011 DQ890878 DQ894032	34504	+	CR450320 CR542213 TSC_hg19_v1_chrX_-_37706781 GQ129368 GQ129369	101965	-	AY534238|XK|7504|X-linked Kx blood group (McLeod syndrome)##BC036019|XK|7504|X-linked Kx blood group (McLeod syndrome)##NM_021083|XK|7504|X-linked Kx blood group (McLeod syndrome)##Z32684|XK|7504|X-linked Kx blood group (McLeod syndrome)##BC093667|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##BC093669|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##BC143528|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##AK124915|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_001170331|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_198511|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_000397|CYBB|1536|cytochrome b-245, beta polypeptide##AK289753|CYBB|1536|cytochrome b-245, beta polypeptide##BC032720|CYBB|1536|cytochrome b-245, beta polypeptide##AK304033|CYBB|1536|cytochrome b-245, beta polypeptide##AK301491|CYBB|1536|cytochrome b-245, beta polypeptide##AK312929|CYBB|1536|cytochrome b-245, beta polypeptide##AK301476|CYBB|1536|cytochrome b-245, beta polypeptide##X04011|CYBB|1536|cytochrome b-245, beta polypeptide##DQ890878|CYBB|1536|cytochrome b-245, beta polypeptide##DQ894032|CYBB|1536|cytochrome b-245, beta polypeptide##CR450320|DYNLT3|6990|dynein, light chain, Tctex-type 3##CR542213|DYNLT3|6990|dynein, light chain, Tctex-type 3##GQ129368|DYNLT3|6990|dynein, light chain, Tctex-type 3##GQ129369|DYNLT3|6990|dynein, light chain, Tctex-type 3	0.999909	CTCF.p2:-8:1.000
chr10	62194309	62194432	reg1003945.p1	13.483	+	U13616 NM_020987	-44810	-	AK292927 AK092527 NM_001149	-293654	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-528046	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	138320	-	EU832293 EU832377 AK172736 BX537917 TSC_hg19_v1_chr10_-_62493273 BX648574	298807	-	TSC_hg19_v1_chr10_-_62493282 NM_001204403	298914	-	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832293|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832377|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX537917|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX648574|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204403|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.689589	CTCF.p2:15:0.690
chr16	49526222	49526349	reg1005023.p1	13.483	+	BC021181 BC021718 NM_144602 CU676858	-118457	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-210551	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	-210785	-	NM_015069	334632	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	532855	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	573608	+	BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##NM_015069|ZNF423|23090|zinc finger protein 423##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3	0.985845	CTCF.p2:10:0.955
chr2	128991204	128991334	reg1005143.p1	13.483	+	AK074376 TSC_hg19_v1_chr2_+_128928049	-63222	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-142408	+	TSC_hg19_v1_chr2_+_128848785 NM_020120 AK293066 AK309101 BC041098	-142501	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	85031	-	NM_032144 AL136727	1745966	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	1895589	-	AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_020120|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AK293066|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AK309101|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##BC041098|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F	0.990014	CTCF.p2:3:0.990
chr6	16965234	16965368	reg1005572.p1	13.483	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	-203604	-	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-726450	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-821991	+	NM_001190766	137187	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	316553	+	NM_001143941	316993	+	BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24##NM_001143941|RBM24|221662|RNA binding motif protein 24	0.601452	CTCF.p2:4:0.601
chr9	34702240	34702360	reg1004953.p1	13.483	+	CR456868 U77180 AB590424 DQ895236 EU176240 U88321 BC027968 AK311945 AX772806 AB000887 NM_006274	-11096	-	AF082393 BC148263 AJ243542 AB010445 NM_006664	-39642	-	TSC_hg19_v1_chr9_+_34653922 AK075530 AK292073 BC003110 NM_004512 NM_147162 U32324	-48377	+	AF001979 CR450326 AB463486 DQ892048 DQ895242 AY358887 U88320 BC027918 AB002409 AK311901 TSC_hg19_v1_chr9_-_34710134 NM_002989	7804	-	AK301951 AK302320 NM_001141917	27198	-	TSC_hg19_v1_chr9_+_34958175 BC041169 NM_015297	255881	+	CR456868|CCL19|6363|chemokine (C-C motif) ligand 19##U77180|CCL19|6363|chemokine (C-C motif) ligand 19##DQ895236|CCL19|6363|chemokine (C-C motif) ligand 19##EU176240|CCL19|6363|chemokine (C-C motif) ligand 19##U88321|CCL19|6363|chemokine (C-C motif) ligand 19##BC027968|CCL19|6363|chemokine (C-C motif) ligand 19##AK311945|CCL19|6363|chemokine (C-C motif) ligand 19##AX772806|CCL19|6363|chemokine (C-C motif) ligand 19##AB000887|CCL19|6363|chemokine (C-C motif) ligand 19##NM_006274|CCL19|6363|chemokine (C-C motif) ligand 19##AF082393|CCL27|10850|chemokine (C-C motif) ligand 27##BC148263|CCL27|10850|chemokine (C-C motif) ligand 27##AJ243542|CCL27|10850|chemokine (C-C motif) ligand 27##AB010445|CCL27|10850|chemokine (C-C motif) ligand 27##NM_006664|CCL27|10850|chemokine (C-C motif) ligand 27##AK075530|IL11RA|3590|interleukin 11 receptor, alpha##AK292073|IL11RA|3590|interleukin 11 receptor, alpha##BC003110|IL11RA|3590|interleukin 11 receptor, alpha##NM_004512|IL11RA|3590|interleukin 11 receptor, alpha##NM_147162|IL11RA|3590|interleukin 11 receptor, alpha##U32324|IL11RA|3590|interleukin 11 receptor, alpha##AF001979|CCL21|6366|chemokine (C-C motif) ligand 21##CR450326|CCL21|6366|chemokine (C-C motif) ligand 21##DQ892048|CCL21|6366|chemokine (C-C motif) ligand 21##DQ895242|CCL21|6366|chemokine (C-C motif) ligand 21##AY358887|CCL21|6366|chemokine (C-C motif) ligand 21##U88320|CCL21|6366|chemokine (C-C motif) ligand 21##BC027918|CCL21|6366|chemokine (C-C motif) ligand 21##AB002409|CCL21|6366|chemokine (C-C motif) ligand 21##AK311901|CCL21|6366|chemokine (C-C motif) ligand 21##NM_002989|CCL21|6366|chemokine (C-C motif) ligand 21##AK302320|FAM205A|259308|family with sequence similarity 205, member A##NM_001141917|FAM205A|259308|family with sequence similarity 205, member A##BC041169|KIAA1045|23349|KIAA1045##NM_015297|KIAA1045|23349|KIAA1045	0.99621	CTCF.p2:0:0.996
chr19	40645849	40645981	reg1005114.p1	13.482	+	TSC_hg19_v1_chr19_-_40596843 AK091274 AX746890 NM_001010880 AK131328 BC021982 NM_001142577 NM_001142578 NM_001142579	-49103	-	TSC_hg19_v1_chr19_-_40562138 AK127063 NM_001005851	-83789	-	NM_178544 AK122968 AK292528 BC045649	-142930	+	TSC_hg19_v1_chr19_+_40697520 NM_002446 X90846 Z48615	51731	+	TSC_hg19_v1_chr19_-_40724275 AK054935 AK289550 BC029539 NM_152479	78373	-	AK023327 AK301833 NM_024877	86664	-	AK091274|ZNF780A|284323|zinc finger protein 780A##NM_001010880|ZNF780A|284323|zinc finger protein 780A##AK131328|ZNF780A|284323|zinc finger protein 780A##BC021982|ZNF780A|284323|zinc finger protein 780A##NM_001142577|ZNF780A|284323|zinc finger protein 780A##NM_001142578|ZNF780A|284323|zinc finger protein 780A##NM_001142579|ZNF780A|284323|zinc finger protein 780A##AK127063|ZNF780B|163131|zinc finger protein 780B##NM_001005851|ZNF780B|163131|zinc finger protein 780B##NM_178544|ZNF546|339327|zinc finger protein 546##AK122968|ZNF546|339327|zinc finger protein 546##AK292528|ZNF546|339327|zinc finger protein 546##BC045649|ZNF546|339327|zinc finger protein 546##NM_002446|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##X90846|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##Z48615|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##AK054935|TTC9B|148014|tetratricopeptide repeat domain 9B##AK289550|TTC9B|148014|tetratricopeptide repeat domain 9B##BC029539|TTC9B|148014|tetratricopeptide repeat domain 9B##NM_152479|TTC9B|148014|tetratricopeptide repeat domain 9B##AK023327|CNTD2|79935|cyclin N-terminal domain containing 2##AK301833|CNTD2|79935|cyclin N-terminal domain containing 2##NM_024877|CNTD2|79935|cyclin N-terminal domain containing 2	0.877768	CTCF.p2:-21:0.878
chr19	6633337	6633456	reg1003874.p1	13.482	+	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	-42238	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	-42290	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	-42364	-	TSC_hg19_v1_chr19_-_6670094 CR541854 CR541871 AB528780 AF036581 AY028261 AY358812 BC018058 AK292037	36728	-	AF064090 NM_003807 NM_172014	37202	-	TSC_hg19_v1_chr19_-_6720662 BC063852 BC150179 BC150200 K02765 AK304071 BC150299 NM_000064 AK299114	87260	-	S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##BT007211|CD70|970|CD70 molecule##CR541854|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541871|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF036581|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY028261|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY358812|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC018058|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AK292037|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF064090|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_003807|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_172014|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC063852|C3|718|complement component 3##BC150179|C3|718|complement component 3##BC150200|C3|718|complement component 3##K02765|C3|718|complement component 3##AK304071|C3|718|complement component 3##BC150299|C3|718|complement component 3##NM_000064|C3|718|complement component 3	0.694155	CTCF.p2:24:0.694
chr2	38953254	38953352	reg1003236.p2	13.481	+	BC019263 TSC_hg19_v1_chr2_+_38893258 AK291489 U11036 BC014916	-60048	+	NM_138801 TSC_hg19_v1_chr2_+_38893054	-60251	+	AK000155 TSC_hg19_v1_chr2_-_38830104 AK292259 NM_001142650 NM_138394	-123162	-	AB445102 BT006745 AB527733 AK091425 AX746975 AY513287 AF055270 BC000997 BC017369 BC017908 BC022328 TSC_hg19_v1_chr2_-_38978504 AK225141 AK293667 AK297161 L22253 AY166860 NM_001031684 NM_001195446	25213	-	NM_024775 AK315627 TSC_hg19_v1_chr2_+_39005351 AK027112 BC018195	52052	+	BC131534 BC060778 NM_198963 AK307514 AK296739 BC153875	149725	-	BC019263|GALM|130589|galactose mutarotase (aldose 1-epimerase)##AK291489|GALM|130589|galactose mutarotase (aldose 1-epimerase)##U11036|GALM|130589|galactose mutarotase (aldose 1-epimerase)##BC014916|GALM|130589|galactose mutarotase (aldose 1-epimerase)##NM_138801|GALM|130589|galactose mutarotase (aldose 1-epimerase)##AK000155|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AK292259|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##NM_001142650|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##NM_138394|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AB445102|SRSF7|6432|serine/arginine-rich splicing factor 7##BT006745|SRSF7|6432|serine/arginine-rich splicing factor 7##AK091425|SRSF7|6432|serine/arginine-rich splicing factor 7##AY513287|SRSF7|6432|serine/arginine-rich splicing factor 7##AF055270|SRSF7|6432|serine/arginine-rich splicing factor 7##BC000997|SRSF7|6432|serine/arginine-rich splicing factor 7##BC017369|SRSF7|6432|serine/arginine-rich splicing factor 7##BC017908|SRSF7|6432|serine/arginine-rich splicing factor 7##BC022328|SRSF7|6432|serine/arginine-rich splicing factor 7##AK225141|SRSF7|6432|serine/arginine-rich splicing factor 7##AK293667|SRSF7|6432|serine/arginine-rich splicing factor 7##AK297161|SRSF7|6432|serine/arginine-rich splicing factor 7##L22253|SRSF7|6432|serine/arginine-rich splicing factor 7##AY166860|SRSF7|6432|serine/arginine-rich splicing factor 7##NM_001031684|SRSF7|6432|serine/arginine-rich splicing factor 7##NM_001195446|SRSF7|6432|serine/arginine-rich splicing factor 7##NM_024775|GEMIN6|79833|gem (nuclear organelle) associated protein 6##AK315627|GEMIN6|79833|gem (nuclear organelle) associated protein 6##AK027112|GEMIN6|79833|gem (nuclear organelle) associated protein 6##BC018195|GEMIN6|79833|gem (nuclear organelle) associated protein 6##BC131534|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##BC060778|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##NM_198963|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##AK307514|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##AK296739|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##BC153875|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	0.97836	CTCF.p2:32:0.978
chr7	86866282	86866417	reg1004300.p1	13.481	+	BT006973 TSC_hg19_v1_chr7_-_86849049 BC002837 NM_024315 AK313794	-17408	-	NM_021145 TSC_hg19_v1_chr7_+_86781946 BC070064	-84412	+	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	-84636	+	BT009845 CR542141 BC061927 TSC_hg19_v1_chr7_-_86974833 BC103631 AB007457 AB007458 BC002709 AK292782 AB007455 AB007456 BC068535	108423	-	TSC_hg19_v1_chr7_+_86975006 NM_001143935 NM_001243745 NM_021151 AK127901 AK313487 BC051874 BC039004 BC012483 BC019226 AF073770 AF168793	108645	+	M23234 NM_000443 NM_018849 NM_018850 BC042531	238665	-	BT006973|C7orf23|79161|chromosome 7 open reading frame 23##BC002837|C7orf23|79161|chromosome 7 open reading frame 23##NM_024315|C7orf23|79161|chromosome 7 open reading frame 23##AK313794|C7orf23|79161|chromosome 7 open reading frame 23##NM_021145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BC070064|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BT009845|TP53TG1|11257|TP53 target 1 (non-protein coding)##CR542141|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC061927|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC103631|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007457|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007458|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC002709|TP53TG1|11257|TP53 target 1 (non-protein coding)##AK292782|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007455|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007456|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC068535|TP53TG1|11257|TP53 target 1 (non-protein coding)##NM_001143935|CROT|54677|carnitine O-octanoyltransferase##NM_001243745|CROT|54677|carnitine O-octanoyltransferase##NM_021151|CROT|54677|carnitine O-octanoyltransferase##AK127901|CROT|54677|carnitine O-octanoyltransferase##AK313487|CROT|54677|carnitine O-octanoyltransferase##BC051874|CROT|54677|carnitine O-octanoyltransferase##BC039004|CROT|54677|carnitine O-octanoyltransferase##BC012483|CROT|54677|carnitine O-octanoyltransferase##BC019226|CROT|54677|carnitine O-octanoyltransferase##AF073770|CROT|54677|carnitine O-octanoyltransferase##AF168793|CROT|54677|carnitine O-octanoyltransferase##M23234|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_000443|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018849|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018850|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##BC042531|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4	0.997658	CTCF.p2:22:0.998
chr7	87046134	87046256	reg1003989.p2	13.481	+	TSC_hg19_v1_chr7_+_86975006 NM_001143935 NM_001243745 NM_021151 AK127901 AK313487 BC051874 BC039004 BC012483 BC019226 AF073770 AF168793	-71201	+	BT009845 CR542141 BC061927 TSC_hg19_v1_chr7_-_86974833 BC103631 AB007457 AB007458 BC002709 AK292782 AB007455 AB007456 BC068535	-71423	-	BT006973 TSC_hg19_v1_chr7_-_86849049 BC002837 NM_024315 AK313794	-197254	-	M23234 NM_000443 NM_018849 NM_018850 BC042531	58819	-	TSC_hg19_v1_chr7_-_87230197 AF016535 BC130424	184084	-	TSC_hg19_v1_chr7_+_87257708 AK055233 NM_001134405 NM_001134406 NM_138290 BC022520 AK293607 AK294039	211622	+	NM_001143935|CROT|54677|carnitine O-octanoyltransferase##NM_001243745|CROT|54677|carnitine O-octanoyltransferase##NM_021151|CROT|54677|carnitine O-octanoyltransferase##AK127901|CROT|54677|carnitine O-octanoyltransferase##AK313487|CROT|54677|carnitine O-octanoyltransferase##BC051874|CROT|54677|carnitine O-octanoyltransferase##BC039004|CROT|54677|carnitine O-octanoyltransferase##BC012483|CROT|54677|carnitine O-octanoyltransferase##BC019226|CROT|54677|carnitine O-octanoyltransferase##AF073770|CROT|54677|carnitine O-octanoyltransferase##AF168793|CROT|54677|carnitine O-octanoyltransferase##BT009845|TP53TG1|11257|TP53 target 1 (non-protein coding)##CR542141|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC061927|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC103631|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007457|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007458|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC002709|TP53TG1|11257|TP53 target 1 (non-protein coding)##AK292782|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007455|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007456|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC068535|TP53TG1|11257|TP53 target 1 (non-protein coding)##BT006973|C7orf23|79161|chromosome 7 open reading frame 23##BC002837|C7orf23|79161|chromosome 7 open reading frame 23##NM_024315|C7orf23|79161|chromosome 7 open reading frame 23##AK313794|C7orf23|79161|chromosome 7 open reading frame 23##M23234|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_000443|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018849|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018850|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##BC042531|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##AF016535|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##BC130424|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK055233|RUNDC3B|154661|RUN domain containing 3B##NM_001134405|RUNDC3B|154661|RUN domain containing 3B##NM_001134406|RUNDC3B|154661|RUN domain containing 3B##NM_138290|RUNDC3B|154661|RUN domain containing 3B##BC022520|RUNDC3B|154661|RUN domain containing 3B##AK293607|RUNDC3B|154661|RUN domain containing 3B##AK294039|RUNDC3B|154661|RUN domain containing 3B	0.99982	CTCF.p2:4:1.000
chr1	1376396	1376519	reg1004284.p1	13.479	+	NM_022834 NM_199121 TSC_hg19_v1_chr1_+_1371095 AK075366 AK096773 AK291557 BC059409	-5420	+	NM_001146685 TSC_hg19_v1_chr1_+_1361524	-14941	+	BC094869 NM_001145210 NM_001243535 NM_001243536	-19634	-	AK091918 AX747252 NM_001039211	8611	+	TSC_hg19_v1_chr1_+_1407144 AK290586	30677	+	AK097309 TSC_hg19_v1_chr1_+_1407157	30700	+	NM_022834|VWA1|64856|von Willebrand factor A domain containing 1##NM_199121|VWA1|64856|von Willebrand factor A domain containing 1##AK075366|VWA1|64856|von Willebrand factor A domain containing 1##AK096773|VWA1|64856|von Willebrand factor A domain containing 1##AK291557|VWA1|64856|von Willebrand factor A domain containing 1##BC059409|VWA1|64856|von Willebrand factor A domain containing 1##NM_001146685|TMEM88B|643965|transmembrane protein 88B##BC094869|ANKRD65|441869|ankyrin repeat domain 65##NM_001145210|ANKRD65|441869|ankyrin repeat domain 65##NM_001243535|ANKRD65|441869|ankyrin repeat domain 65##NM_001243536|ANKRD65|441869|ankyrin repeat domain 65##AK091918|ATAD3C|219293|ATPase family, AAA domain containing 3C##NM_001039211|ATAD3C|219293|ATPase family, AAA domain containing 3C##AK290586|ATAD3B|83858|ATPase family, AAA domain containing 3B	0.996425	CTCF.p2:0:0.996
chr1	201978783	201978889	reg1003034.p1	13.479	+	TSC_hg19_v1_chr1_+_201951788 BC012166 AJ242586 DQ896012 EU176398 AJ296161	-27044	+	TSC_hg19_v1_chr1_+_201951775 NM_020216 AK097372 BC001064	-27070	+	NM_006335 BC015098 TSC_hg19_v1_chr1_+_201924640 AK315602 BC009784 BC007106 BC020833 X97544 AF106622 BC000294 BC004439 BC013823	-54198	+	NM_001114309 NM_004433 TSC_hg19_v1_chr1_+_201979714 AK309265 AK312273 U97156 BC003569 U73843 U73844 AF016295	872	+	U66894 TSC_hg19_v1_chr1_+_201979752 AK225446 AF517841	948	+	AK295576 AK313044 TSC_hg19_v1_chr1_+_202092044 BC050334 NM_004767 AK222639 Y16280	113181	+	BC012166|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AJ242586|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##DQ896012|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##EU176398|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AJ296161|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##NM_020216|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AK097372|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##BC001064|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##NM_006335|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC015098|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##AK315602|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC009784|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC007106|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC020833|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##X97544|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##AF106622|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC000294|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC004439|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC013823|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##NM_001114309|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##NM_004433|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK309265|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK312273|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U97156|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##BC003569|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73843|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73844|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF016295|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U66894|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK225446|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF517841|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK295576|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK313044|GPR37L1|9283|G protein-coupled receptor 37 like 1##BC050334|GPR37L1|9283|G protein-coupled receptor 37 like 1##NM_004767|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK222639|GPR37L1|9283|G protein-coupled receptor 37 like 1##Y16280|GPR37L1|9283|G protein-coupled receptor 37 like 1	0.999839	CTCF.p2:11:1.000
chr1	211828659	211828779	reg1004184.p1	13.479	+	TSC_hg19_v1_chr1_-_211752056 BC121015 BC121016 NM_021194	-76631	-	AB451467 TSC_hg19_v1_chr1_-_211752048	-76719	-	AF364518 TSC_hg19_v1_chr1_-_211751805	-76957	-	BT019729 CU688108 AB527570 AY045701 Z29066 AK223353 AK225522 AK303092 TSC_hg19_v1_chr1_-_211848968 U11050 BC043502 BC065932 BC052807 NM_001204182 NM_001204183 NM_002497	20189	-	BC034621 TSC_hg19_v1_chr1_-_212003681	175029	-	D86960 NM_014873 TSC_hg19_v1_chr1_-_212004119	175411	-	BC121015|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121016|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##NM_021194|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AF364518|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BT019729|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AY045701|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##Z29066|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK223353|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK225522|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK303092|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##U11050|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC043502|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC065932|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC052807|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204182|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204183|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_002497|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC034621|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	0.933515	CTCF.p2:13:0.934
chr4	78306662	78306786	reg1005909.p1	13.479	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-227231	+	TSC_hg19_v1_chr4_+_78078398 U47414	-228264	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	-228363	+	AF044197 NM_006419	126181	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	433820	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	477190	+	L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1	0.999786	CTCF.p2:-3:1.000
chr3	99472358	99472473	reg1003889.p2	13.476	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	-114965	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-851923	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-1020828	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	64330	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	122576	-	BC017987 NM_001042459 NM_182909 AF329092 AX776292	360937	-	AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like	0.402854	CTCF.p2:7:0.403
chr5	137915087	137915215	reg1004604.p1	13.476	+	NM_004134	-3834	-	AK222758 TSC_hg19_v1_chr5_-_137911101 BC000478 BC024034 AK297897 AK293990 L11066 AK315177	-4063	-	BC030634 CU674234 TSC_hg19_v1_chr5_-_137911029 AB463063 EU446981 AK297795 L15189	-4132	-	TSC_hg19_v1_chr5_+_138089107 NM_001903 AK296708 AK300439 D14705	173943	+	TSC_hg19_v1_chr5_+_138089137 AK094151 D13866 BC000385 AK304267	173980	+	AK309790 TSC_hg19_v1_chr5_-_138211025 AB007876 BC028172 AK291064 AK297332	295862	-	NM_004134|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK222758|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC000478|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC024034|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK297897|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK293990|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##L11066|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK315177|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC030634|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##EU446981|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK297795|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##L15189|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	0.547554	CTCF.p2:-9:0.548
chr9	139958632	139958765	reg1005521.p1	13.476	+	AF144748 EF495152 CU690182 DQ892410 DQ895623 U91510 BC035738 NM_001246 NM_203468	-10223	-	TSC_hg19_v1_chr9_-_139940630 AF327349 AK074793 AF285836 NM_015392	-18059	-	TSC_hg19_v1_chr9_-_139940559 BC004217	-18136	-	TSC_hg19_v1_chr9_-_139965024 BC048267 NM_178448 DQ150361	6335	-	TSC_hg19_v1_chr9_+_139971968 NM_207309	13255	+	AL832421 TSC_hg19_v1_chr9_+_139972236 AK095393 BC106035	13542	+	AF144748|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##EF495152|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##DQ892410|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##DQ895623|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##U91510|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##BC035738|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##NM_001246|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##NM_203468|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##AF327349|NPDC1|56654|neural proliferation, differentiation and control, 1##AK074793|NPDC1|56654|neural proliferation, differentiation and control, 1##AF285836|NPDC1|56654|neural proliferation, differentiation and control, 1##NM_015392|NPDC1|56654|neural proliferation, differentiation and control, 1##BC004217|NPDC1|56654|neural proliferation, differentiation and control, 1##BC048267|C9orf140|89958|chromosome 9 open reading frame 140##NM_178448|C9orf140|89958|chromosome 9 open reading frame 140##DQ150361|C9orf140|89958|chromosome 9 open reading frame 140##NM_207309|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1##AL832421|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1##AK095393|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1##BC106035|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	0.831238	CTCF.p2:12:0.755
chr11	47395583	47395689	reg1003539.p1	13.475	+	BC136543 BC136546 X84075 BC142685 BC151211 AK291569 AK297843 EF560722 EU747718 EU747719 NM_000256 TSC_hg19_v1_chr11_-_47374254	-21399	-	TSC_hg19_v1_chr11_+_47291683 NM_001135943 NM_130475 NM_130476 BC040484 AB002356 U44953	-103918	+	TSC_hg19_v1_chr11_+_47291234 NM_001135944 NM_003682 NM_130471 NM_130472 NM_130473 NM_130474 AF440100 AF440101 AF440102 AF440103 AF440434 AK292442	-104423	+	AB464244 TSC_hg19_v1_chr11_-_47399956	4306	-	TSC_hg19_v1_chr11_-_47400039 AK310065	4379	-	TSC_hg19_v1_chr11_-_47400097 X52056 NM_001080547 NM_003120	4475	-	BC136543|MYBPC3|4607|myosin binding protein C, cardiac##BC136546|MYBPC3|4607|myosin binding protein C, cardiac##X84075|MYBPC3|4607|myosin binding protein C, cardiac##BC142685|MYBPC3|4607|myosin binding protein C, cardiac##BC151211|MYBPC3|4607|myosin binding protein C, cardiac##AK291569|MYBPC3|4607|myosin binding protein C, cardiac##AK297843|MYBPC3|4607|myosin binding protein C, cardiac##EF560722|MYBPC3|4607|myosin binding protein C, cardiac##EU747718|MYBPC3|4607|myosin binding protein C, cardiac##EU747719|MYBPC3|4607|myosin binding protein C, cardiac##NM_000256|MYBPC3|4607|myosin binding protein C, cardiac##NM_001135943|MADD|8567|MAP-kinase activating death domain##NM_130475|MADD|8567|MAP-kinase activating death domain##NM_130476|MADD|8567|MAP-kinase activating death domain##BC040484|MADD|8567|MAP-kinase activating death domain##AB002356|MADD|8567|MAP-kinase activating death domain##U44953|MADD|8567|MAP-kinase activating death domain##NM_001135944|MADD|8567|MAP-kinase activating death domain##NM_003682|MADD|8567|MAP-kinase activating death domain##NM_130471|MADD|8567|MAP-kinase activating death domain##NM_130472|MADD|8567|MAP-kinase activating death domain##NM_130473|MADD|8567|MAP-kinase activating death domain##NM_130474|MADD|8567|MAP-kinase activating death domain##AF440100|MADD|8567|MAP-kinase activating death domain##AF440101|MADD|8567|MAP-kinase activating death domain##AF440102|MADD|8567|MAP-kinase activating death domain##AF440103|MADD|8567|MAP-kinase activating death domain##AF440434|MADD|8567|MAP-kinase activating death domain##AK292442|MADD|8567|MAP-kinase activating death domain##AK310065|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##X52056|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##NM_001080547|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##NM_003120|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1	0.986992	CTCF.p2:6:0.987
chr6	139137329	139137476	reg1004318.p1	13.474	+	NM_001077706 NM_001195037	-20155	+	AK092592 AX747618 NM_001242740	-42601	-	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	-42612	+	BC021211 TSC_hg19_v1_chr6_-_139309122 AB209143	171675	-	TSC_hg19_v1_chr6_-_139309357 BC035286 AK312938	171946	-	TSC_hg19_v1_chr6_-_139309391 BC012764 NM_001128617 NM_031922	172008	-	NM_001077706|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##NM_001195037|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##AK092592|LOC100507462|100507462|uncharacterized LOC100507462##NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A##BC021211|REPS1|85021|RALBP1 associated Eps domain containing 1##AB209143|REPS1|85021|RALBP1 associated Eps domain containing 1##BC035286|REPS1|85021|RALBP1 associated Eps domain containing 1##AK312938|REPS1|85021|RALBP1 associated Eps domain containing 1##BC012764|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_001128617|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_031922|REPS1|85021|RALBP1 associated Eps domain containing 1	0.173423	
chr1	183287739	183287873	reg1005005.p1	13.473	+	BC020998 NM_170706	-13798	-	TSC_hg19_v1_chr1_+_183155398 AK296944 X73902 BC112286 BC113378 BC143653	-132387	+	AK307945 Z15008 Z15009 TSC_hg19_v1_chr1_+_183155386	-132433	+	AB383893 TSC_hg19_v1_chr1_-_183387486	99643	-	AB007948 TSC_hg19_v1_chr1_-_183387507 AK291390 NM_015039 AF288395	99812	-	AL050020 TSC_hg19_v1_chr1_-_183441513	153652	-	BC020998|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##NM_170706|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AK296944|LAMC2|3918|laminin, gamma 2##X73902|LAMC2|3918|laminin, gamma 2##BC112286|LAMC2|3918|laminin, gamma 2##BC113378|LAMC2|3918|laminin, gamma 2##BC143653|LAMC2|3918|laminin, gamma 2##AK307945|LAMC2|3918|laminin, gamma 2##Z15008|LAMC2|3918|laminin, gamma 2##Z15009|LAMC2|3918|laminin, gamma 2##AB007948|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AK291390|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##NM_015039|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AF288395|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AL050020|DKFZP564C196|284649|uncharacterized LOC284649	0.363543	CTCF.p2:24:0.364
chr1	211649694	211649801	reg1003710.p2	13.473	+	TSC_hg19_v1_chr1_+_211556168 BC005997	-93579	+	TSC_hg19_v1_chr1_+_211556144 AK130858	-93600	+	BC029600 NM_145759	-130042	+	AY191519 NM_001164688 NM_183059	16511	-	AF364518 TSC_hg19_v1_chr1_-_211751805	102015	-	AB451467 TSC_hg19_v1_chr1_-_211752048	102253	-	BC005997|LINC00467|84791|long intergenic non-protein coding RNA 467##AK130858|LINC00467|84791|long intergenic non-protein coding RNA 467##BC029600|TRAF5|7188|TNF receptor-associated factor 5##NM_145759|TRAF5|7188|TNF receptor-associated factor 5##AY191519|RD3|343035|retinal degeneration 3##NM_001164688|RD3|343035|retinal degeneration 3##NM_183059|RD3|343035|retinal degeneration 3##AF364518|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1	0.936778	CTCF.p2:-4:0.937
chr1	11097791	11097920	reg1004525.p1	13.472	+	NM_007375 TSC_hg19_v1_chr1_+_11072715 AK299454 AK312416 BC001487 BC095435 BC071657 AL050265 AK222754 AK295920	-25145	+	NM_001170754	-55762	-	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	-241150	-	Y18282 TSC_hg19_v1_chr1_-_11107270 Y18283 X98400 Y09926 BC052299 BC067359 BC080556 Y18281 Y18284 AB008047	9364	-	AK290823 NM_006610 NM_139208 TSC_hg19_v1_chr1_-_11107299	9456	-	EU831469 EU831556 TSC_hg19_v1_chr1_-_11120040 BC033106	22168	-	NM_007375|TARDBP|23435|TAR DNA binding protein##AK299454|TARDBP|23435|TAR DNA binding protein##AK312416|TARDBP|23435|TAR DNA binding protein##BC001487|TARDBP|23435|TAR DNA binding protein##BC095435|TARDBP|23435|TAR DNA binding protein##BC071657|TARDBP|23435|TAR DNA binding protein##AL050265|TARDBP|23435|TAR DNA binding protein##AK222754|TARDBP|23435|TAR DNA binding protein##AK295920|TARDBP|23435|TAR DNA binding protein##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127##DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##Y18282|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18283|MASP2|10747|mannan-binding lectin serine peptidase 2##X98400|MASP2|10747|mannan-binding lectin serine peptidase 2##Y09926|MASP2|10747|mannan-binding lectin serine peptidase 2##BC052299|MASP2|10747|mannan-binding lectin serine peptidase 2##BC067359|MASP2|10747|mannan-binding lectin serine peptidase 2##BC080556|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18281|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18284|MASP2|10747|mannan-binding lectin serine peptidase 2##AB008047|MASP2|10747|mannan-binding lectin serine peptidase 2##AK290823|MASP2|10747|mannan-binding lectin serine peptidase 2##NM_006610|MASP2|10747|mannan-binding lectin serine peptidase 2##NM_139208|MASP2|10747|mannan-binding lectin serine peptidase 2##EU831469|SRM|6723|spermidine synthase##EU831556|SRM|6723|spermidine synthase##BC033106|SRM|6723|spermidine synthase	0.979662	CTCF.p2:-17:0.980
chr11	57224924	57225038	reg1003075.p1	13.469	+	NM_017611	-29929	-	TSC_hg19_v1_chr11_-_57194592 AK075552 AK298028 AK315839 NM_199329	-30389	-	TSC_hg19_v1_chr11_-_57194589 AK311401	-30394	-	TSC_hg19_v1_chr11_+_57228149 BC113673 BC117276 BC143818 AF532858 AX751514 AY250221 DQ864979 NM_178570	3251	+	AF045584 TSC_hg19_v1_chr11_-_57282334 BC001639 NM_001198810	57355	-	TSC_hg19_v1_chr11_-_57283184 AB103033 NM_003627	58191	-	NM_017611|SLC43A3|29015|solute carrier family 43, member 3##AK075552|SLC43A3|29015|solute carrier family 43, member 3##AK298028|SLC43A3|29015|solute carrier family 43, member 3##AK315839|SLC43A3|29015|solute carrier family 43, member 3##NM_199329|SLC43A3|29015|solute carrier family 43, member 3##AK311401|SLC43A3|29015|solute carrier family 43, member 3##BC113673|RTN4RL2|349667|reticulon 4 receptor-like 2##BC117276|RTN4RL2|349667|reticulon 4 receptor-like 2##BC143818|RTN4RL2|349667|reticulon 4 receptor-like 2##AF532858|RTN4RL2|349667|reticulon 4 receptor-like 2##AX751514|RTN4RL2|349667|reticulon 4 receptor-like 2##AY250221|RTN4RL2|349667|reticulon 4 receptor-like 2##DQ864979|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_178570|RTN4RL2|349667|reticulon 4 receptor-like 2##AF045584|SLC43A1|8501|solute carrier family 43, member 1##BC001639|SLC43A1|8501|solute carrier family 43, member 1##NM_001198810|SLC43A1|8501|solute carrier family 43, member 1##AB103033|SLC43A1|8501|solute carrier family 43, member 1##NM_003627|SLC43A1|8501|solute carrier family 43, member 1	0.992394	CTCF.p2:0:0.992
chr12	105673381	105673511	reg1005557.p1	13.469	+	CU689714 AB527678 DQ892107 DQ895301 TSC_hg19_v1_chr12_-_105629989 AK001521 AK290562 AK297100 BC033731 BC028008 AY113704 NM_001251904 NM_018171	-43536	-	NM_001251905	-46264	-	TSC_hg19_v1_chr12_+_105501556 AB385420	-171879	+	TSC_hg19_v1_chr12_+_105724468 BC013920 NM_001145199 BC067897 BC045812 BC061920 AK056999 AJ311377	51025	+	AJ311378 TSC_hg19_v1_chr12_+_105724640	51193	+	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	859236	-	DQ892107|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##DQ895301|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK001521|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK290562|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK297100|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC033731|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC028008|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AY113704|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251904|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_018171|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251905|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC013920|C12orf75|387882|chromosome 12 open reading frame 75##NM_001145199|C12orf75|387882|chromosome 12 open reading frame 75##BC067897|C12orf75|387882|chromosome 12 open reading frame 75##BC045812|C12orf75|387882|chromosome 12 open reading frame 75##BC061920|C12orf75|387882|chromosome 12 open reading frame 75##AK056999|C12orf75|387882|chromosome 12 open reading frame 75##AJ311377|C12orf75|387882|chromosome 12 open reading frame 75##AJ311378|C12orf75|387882|chromosome 12 open reading frame 75##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1	0.997954	CTCF.p2:-13:0.998
chr16	81771706	81771838	reg1003692.p1	13.469	+	AY172689 NM_030629	-242819	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-292939	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-423122	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	41125	+	TSC_hg19_v1_chr16_+_81812901 AB208914	41130	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	41158	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.983568	CTCF.p2:14:0.913
chr2	231024984	231025116	reg1003869.p1	13.468	+	BC065524 BC034382 AK055356 TSC_hg19_v1_chr2_-_230933641 NM_152527	-91384	-	TSC_hg19_v1_chr2_+_230787218 BC017869 BC022538 NM_174899 BC033935 AK289655 AK309702	-237833	+	TSC_hg19_v1_chr2_-_230786712 AK310971	-238301	-	AL832300 BC012447 AK026488 AF280094 AF280095 BC019059 NM_004509 NM_004510 NM_080424 TSC_hg19_v1_chr2_-_231084830	59665	-	AK301097 NM_001185015	65393	-	AK301317 AK301267 NM_001005176 NM_007237 U36499 U36500 U63420 BC105744 BC105960 BC105743 BC054890 BC070160 BC038091	65413	+	BC065524|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##BC034382|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##AK055356|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##NM_152527|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##BC017869|FBXO36|130888|F-box protein 36##BC022538|FBXO36|130888|F-box protein 36##NM_174899|FBXO36|130888|F-box protein 36##BC033935|FBXO36|130888|F-box protein 36##AK289655|FBXO36|130888|F-box protein 36##AK309702|FBXO36|130888|F-box protein 36##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12##AL832300|SP110|3431|SP110 nuclear body protein##BC012447|SP110|3431|SP110 nuclear body protein##AK026488|SP110|3431|SP110 nuclear body protein##AF280094|SP110|3431|SP110 nuclear body protein##AF280095|SP110|3431|SP110 nuclear body protein##BC019059|SP110|3431|SP110 nuclear body protein##NM_004509|SP110|3431|SP110 nuclear body protein##NM_004510|SP110|3431|SP110 nuclear body protein##NM_080424|SP110|3431|SP110 nuclear body protein##AK301097|SP110|3431|SP110 nuclear body protein##NM_001185015|SP110|3431|SP110 nuclear body protein##AK301317|SP140|11262|SP140 nuclear body protein##AK301267|SP140|11262|SP140 nuclear body protein##NM_001005176|SP140|11262|SP140 nuclear body protein##NM_007237|SP140|11262|SP140 nuclear body protein##U36499|SP140|11262|SP140 nuclear body protein##U36500|SP140|11262|SP140 nuclear body protein##U63420|SP140|11262|SP140 nuclear body protein##BC105744|SP140|11262|SP140 nuclear body protein##BC105960|SP140|11262|SP140 nuclear body protein##BC105743|SP140|11262|SP140 nuclear body protein##BC054890|SP140|11262|SP140 nuclear body protein##BC070160|SP140|11262|SP140 nuclear body protein##BC038091|SP140|11262|SP140 nuclear body protein	0.999609	CTCF.p2:15:1.000
chr3	88052410	88052555	reg1005509.p1	13.468	+	NM_000866	-20757	+	AB587506 L18781 X72215 X62429 D10216 NM_000306 NM_001122757	-726809	-	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	-775947	+	BC052980 TSC_hg19_v1_chr3_-_88108150 AL117392 NM_001008390 NM_003663	55661	-	AF543494 NM_018293	135779	+	NM_001195308 BC005222	146542	-	NM_000866|HTR1F|3355|5-hydroxytryptamine (serotonin) receptor 1F##L18781|POU1F1|5449|POU class 1 homeobox 1##X72215|POU1F1|5449|POU class 1 homeobox 1##X62429|POU1F1|5449|POU class 1 homeobox 1##D10216|POU1F1|5449|POU class 1 homeobox 1##NM_000306|POU1F1|5449|POU class 1 homeobox 1##NM_001122757|POU1F1|5449|POU class 1 homeobox 1##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B##BC052980|CGGBP1|8545|CGG triplet repeat binding protein 1##AL117392|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_001008390|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_003663|CGGBP1|8545|CGG triplet repeat binding protein 1##AF543494|ZNF654|55279|zinc finger protein 654##NM_018293|ZNF654|55279|zinc finger protein 654##NM_001195308|CGGBP1|8545|CGG triplet repeat binding protein 1##BC005222|CGGBP1|8545|CGG triplet repeat binding protein 1	0.99779	CTCF.p2:15:0.998
chr1	85086446	85086610	reg1001739.p1	13.466	+	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-46422	-	TSC_hg19_v1_chr1_-_84972262 NM_005274	-114259	-	TSC_hg19_v1_chr1_-_84971888 AK312111	-114604	-	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	69548	-	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	272358	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	376180	-	M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##NM_005274|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AK312111|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2	0.981225	CTCF.p2:9:0.981
chr11	36644454	36644572	reg1004285.p1	13.465	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-24711	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-28409	+	NM_000448 M29474	-54945	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	3670081	-	AB046800 NM_020929	3671150	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	6689005	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.836799	CTCF.p2:-2:0.837
chr1	39568350	39568482	reg1003479.p1	13.465	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-21328	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	-76408	+	TSC_hg19_v1_chr1_+_39456956 NM_001136275 NM_024595 AK022728 AK092624 AX747634 AK124799 AK126262 AK223276 AK298890 AK303098 BC001498 BC119745 BC119746 AY326465	-111354	+	NM_015038	306759	+	TSC_hg19_v1_chr1_+_39922264 AK023821	353903	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	388929	+	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_001136275|AKIRIN1|79647|akirin 1##NM_024595|AKIRIN1|79647|akirin 1##AK022728|AKIRIN1|79647|akirin 1##AK092624|AKIRIN1|79647|akirin 1##AK124799|AKIRIN1|79647|akirin 1##AK126262|AKIRIN1|79647|akirin 1##AK223276|AKIRIN1|79647|akirin 1##AK298890|AKIRIN1|79647|akirin 1##AK303098|AKIRIN1|79647|akirin 1##BC001498|AKIRIN1|79647|akirin 1##BC119745|AKIRIN1|79647|akirin 1##BC119746|AKIRIN1|79647|akirin 1##AY326465|AKIRIN1|79647|akirin 1##NM_015038|KIAA0754|643314|KIAA0754##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a	0.0	
chr3	108633983	108634104	reg1003355.p1	13.465	+	AK291991 AJ240085 AF161547 NM_016388 BC025713 AJ224878	-92449	+	HQ258043 AM050721 BC113502 BC113528 BC069318 AF290873 AF323084 AY358655 NM_032579 TSC_hg19_v1_chr3_-_108476258	-157898	-	AK023389 TSC_hg19_v1_chr3_+_108308549 AY227654 AK023138 BC056674 AK297451 BC063882 BC039018 AY227651	-325484	+	AF110003 EU832759 GQ129299 AF110002 BC103993 BC103994 AB593147 NM_005459	38568	-	CU690636 BC050307 AK302642 AF084946 BC028680 NM_014429	202907	-	AK026416 TSC_hg19_v1_chr3_+_108855566	221520	+	AK291991|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ240085|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AF161547|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##NM_016388|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##BC025713|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ224878|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##HQ258043|RETNLB|84666|resistin like beta##AM050721|RETNLB|84666|resistin like beta##BC113502|RETNLB|84666|resistin like beta##BC113528|RETNLB|84666|resistin like beta##BC069318|RETNLB|84666|resistin like beta##AF290873|RETNLB|84666|resistin like beta##AF323084|RETNLB|84666|resistin like beta##AY358655|RETNLB|84666|resistin like beta##NM_032579|RETNLB|84666|resistin like beta##AK023389|DZIP3|9666|DAZ interacting protein 3, zinc finger##AY227654|DZIP3|9666|DAZ interacting protein 3, zinc finger##AK023138|DZIP3|9666|DAZ interacting protein 3, zinc finger##BC056674|DZIP3|9666|DAZ interacting protein 3, zinc finger##AK297451|DZIP3|9666|DAZ interacting protein 3, zinc finger##BC063882|DZIP3|9666|DAZ interacting protein 3, zinc finger##BC039018|DZIP3|9666|DAZ interacting protein 3, zinc finger##AY227651|DZIP3|9666|DAZ interacting protein 3, zinc finger##AF110003|GUCA1C|9626|guanylate cyclase activator 1C##EU832759|GUCA1C|9626|guanylate cyclase activator 1C##GQ129299|GUCA1C|9626|guanylate cyclase activator 1C##AF110002|GUCA1C|9626|guanylate cyclase activator 1C##BC103993|GUCA1C|9626|guanylate cyclase activator 1C##BC103994|GUCA1C|9626|guanylate cyclase activator 1C##AB593147|GUCA1C|9626|guanylate cyclase activator 1C##NM_005459|GUCA1C|9626|guanylate cyclase activator 1C##BC050307|MORC1|27136|MORC family CW-type zinc finger 1##AK302642|MORC1|27136|MORC family CW-type zinc finger 1##AF084946|MORC1|27136|MORC family CW-type zinc finger 1##BC028680|MORC1|27136|MORC family CW-type zinc finger 1##NM_014429|MORC1|27136|MORC family CW-type zinc finger 1##AK026416|FLJ22763|401081|uncharacterized LOC401081	0.997321	CTCF.p2:20:0.997
chr8	2672126	2672242	reg1003822.p1	13.465	+	AK128880 TSC_hg19_v1_chr8_-_2585966	-86202	-	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-678982	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-719276	+	AY017307 TSC_hg19_v1_chr8_-_4852228	2180041	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	2180110	-	TSC_hg19_v1_chr8_-_6264053 BC036625	3591873	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.989319	CTCF.p2:15:0.989
chr1	150141290	150141412	reg1003639.p1	13.464	+	TSC_hg19_v1_chr1_+_150122415 AB464030 AK222921 CU679641 DQ893381 DQ896780 AF073836	-18913	+	TSC_hg19_v1_chr1_+_150122268 AF217956 AF168676 BC010149	-19047	+	TSC_hg19_v1_chr1_+_150122120 AK302255 AF192912 AF291105 NM_016274	-19219	+	AK095228 NM_001136479	65674	-	AB528764 AM393076 AL833660 TSC_hg19_v1_chr1_-_150208332 AK303333 BC003380 AL832664 AK303392 AK223469	66916	-	AY057381 TSC_hg19_v1_chr1_-_150208461 AK092672 AX747663	67100	-	AK222921|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ893381|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ896780|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF073836|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF217956|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF168676|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##BC010149|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AK302255|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF192912|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF291105|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##NM_016274|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AK095228|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##NM_001136479|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AM393076|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL833660|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303333|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##BC003380|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL832664|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303392|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK223469|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AY057381|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK092672|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	0.998647	CTCF.p2:12:0.999
chr1	40071981	40072086	reg1003259.p2	13.464	+	TSC_hg19_v1_chr1_-_40042519 NM_001135653 NM_001135654 NM_003819	-29514	-	BC094755 TSC_hg19_v1_chr1_-_40042463	-29557	-	U75686 BC065540 TSC_hg19_v1_chr1_-_40042460 BC071591	-29596	-	TSC_hg19_v1_chr1_-_40098640 AK300463	26622	-	AF311885 EU446871 TSC_hg19_v1_chr1_-_40105307 AB463718 AJ272215 BC006087	33283	-	TSC_hg19_v1_chr1_-_40105343 NM_014571	33312	-	NM_001135653|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##NM_001135654|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##NM_003819|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC094755|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##U75686|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC065540|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC071591|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##AK300463|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AF311885|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##EU446871|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AJ272215|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##BC006087|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##NM_014571|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like	0.999854	CTCF.p2:1:1.000
chr5	78195768	78195915	reg1004194.p1	13.464	+	TSC_hg19_v1_chr5_-_77944584 NM_005779	-251275	-	CR936660 TSC_hg19_v1_chr5_-_77845052	-350818	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-389645	-	J05225 TSC_hg19_v1_chr5_-_78281101	85247	-	AK290865 TSC_hg19_v1_chr5_-_78281134	85292	-	TSC_hg19_v1_chr5_-_78281142 AK314903	85305	-	NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B##AK314903|ARSB|411|arylsulfatase B	0.638251	CTCF.p2:-5:0.638
chr6	167702257	167702393	reg1005551.p1	13.464	+	NM_001145121	-118245	+	BC095537 NM_005299	-131009	-	NM_031409 U68031 U68030	-166076	+	AK091987 AX747293 NM_001143947 NM_018974 AJ422141 AJ508812 BC098248 BC099718 BC105635	2551	+	AK093039 AK225984 AX747876 NM_031949 BC030650 AK301755 BC047411 AK314450 AY026506 CU688966 CU690408	36292	+	BC068592 U03399 BC063451 BC033909 BC034995 NM_004610	95632	-	NM_001145121|TCP10L2|401285|t-complex 10-like 2 (mouse)##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##AK091987|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_001143947|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_018974|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ422141|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ508812|UNC93A|54346|unc-93 homolog A (C. elegans)##BC098248|UNC93A|54346|unc-93 homolog A (C. elegans)##BC099718|UNC93A|54346|unc-93 homolog A (C. elegans)##BC105635|UNC93A|54346|unc-93 homolog A (C. elegans)##AK093039|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK225984|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##NM_031949|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC030650|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK301755|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC047411|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK314450|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AY026506|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC068592|TCP10|6953|t-complex 10 homolog (mouse)##U03399|TCP10|6953|t-complex 10 homolog (mouse)##BC063451|TCP10|6953|t-complex 10 homolog (mouse)##NM_004610|TCP10|6953|t-complex 10 homolog (mouse)	0.99905	CTCF.p2:1:0.999
chr20	20549354	20549476	reg1004758.p1	13.462	+	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	-200661	+	NM_001167816 AL117439	-512095	+	BC144222 AF255443 AF318303 AF318304 AF318305 NM_016652	-512728	-	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	143813	-	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	557249	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	557312	+	M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1##BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1	0.656576	CTCF.p2:24:0.657
chr4	10015506	10015610	reg1003453.p2	13.462	+	NM_000798	-232301	+	AF529414 NM_001040448	-569299	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-650705	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	7566	-	AK310895 BC018897 NM_001001290 AK096819	26364	-	TSC_hg19_v1_chr4_-_10118286 AB385044 CU674086 CU677992	102729	-	NM_000798|DRD5|1816|dopamine receptor D5##AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.997183	CTCF.p2:2:0.997
chr17	21219976	21220083	reg1004247.p2	13.461	+	NM_002756	-28682	+	BC032478 TSC_hg19_v1_chr17_+_21188087 AK093838 AK223490 D87116 CU689390 DQ894188 AB451226 AB451349 CR536514 CR541793 GQ225578	-31897	+	TSC_hg19_v1_chr17_+_21188022 AK315505	-32005	+	TSC_hg19_v1_chr17_+_21279667 BC027982 NM_021012	59653	+	FJ434338 NM_001194958	88418	+	TSC_hg19_v1_chr17_-_21454933 AK056436 BC132738 BC136630 BC019938 BC010612 BC052777 BC053952 NM_001113434	234894	-	NM_002756|MAP2K3|5606|mitogen-activated protein kinase kinase 3##BC032478|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK093838|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK223490|MAP2K3|5606|mitogen-activated protein kinase kinase 3##D87116|MAP2K3|5606|mitogen-activated protein kinase kinase 3##DQ894188|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AB451226|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AB451349|MAP2K3|5606|mitogen-activated protein kinase kinase 3##CR536514|MAP2K3|5606|mitogen-activated protein kinase kinase 3##CR541793|MAP2K3|5606|mitogen-activated protein kinase kinase 3##GQ225578|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK315505|MAP2K3|5606|mitogen-activated protein kinase kinase 3##BC027982|KCNJ12|3768|potassium inwardly-rectifying channel, subfamily J, member 12##NM_021012|KCNJ12|3768|potassium inwardly-rectifying channel, subfamily J, member 12##FJ434338|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##NM_001194958|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##AK056436|C17orf51|339263|chromosome 17 open reading frame 51##BC132738|C17orf51|339263|chromosome 17 open reading frame 51##BC136630|C17orf51|339263|chromosome 17 open reading frame 51##BC019938|C17orf51|339263|chromosome 17 open reading frame 51##BC010612|C17orf51|339263|chromosome 17 open reading frame 51##BC052777|C17orf51|339263|chromosome 17 open reading frame 51##BC053952|C17orf51|339263|chromosome 17 open reading frame 51##NM_001113434|C17orf51|339263|chromosome 17 open reading frame 51	0.998714	CTCF.p2:0:0.999
chr17	62103251	62103396	reg1005536.p1	13.460	+	TSC_hg19_v1_chr17_-_62097985 AK295382 AK309953 NM_001099786 NM_001099787 NM_001099788 NM_001099789	-5341	-	NM_000873 TSC_hg19_v1_chr17_-_62084314	-19018	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	-27561	+	TSC_hg19_v1_chr17_-_62207401 AB385116 BC130405 BC130407	104075	-	AF059198 AB209869 TSC_hg19_v1_chr17_-_62207502 NM_001433 AK292403	104193	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	237263	-	AK295382|ICAM2|3384|intercellular adhesion molecule 2##NM_001099786|ICAM2|3384|intercellular adhesion molecule 2##NM_001099787|ICAM2|3384|intercellular adhesion molecule 2##NM_001099788|ICAM2|3384|intercellular adhesion molecule 2##NM_001099789|ICAM2|3384|intercellular adhesion molecule 2##NM_000873|ICAM2|3384|intercellular adhesion molecule 2##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##BC130405|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130407|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AF059198|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AB209869|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##NM_001433|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK292403|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2	0.99868	CTCF.p2:8:0.999
chr11	75578945	75579084	reg1005080.p1	13.459	+	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	-52736	+	NM_003369 TSC_hg19_v1_chr11_+_75526233 AK291011	-52792	+	TSC_hg19_v1_chr11_+_75479822 AB048286 AY780646 AY358532 AL834287 AF384161 CU677247 AY780647	-99091	+	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	338498	-	TSC_hg19_v1_chr11_-_75921806 AK075540	342790	-	TSC_hg19_v1_chr11_-_76091995 AB590785 AF007393 AF081567 HQ258648 NM_004705 AK291843 BC117138 BC117140 BC110304	512994	-	BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##NM_003369|UVRAG|7405|UV radiation resistance associated gene##AK291011|UVRAG|7405|UV radiation resistance associated gene##AB048286|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY358532|DGAT2|84649|diacylglycerol O-acyltransferase 2##AL834287|DGAT2|84649|diacylglycerol O-acyltransferase 2##AF384161|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY780647|DGAT2|84649|diacylglycerol O-acyltransferase 2##BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11##AK075540|WNT11|7481|wingless-type MMTV integration site family, member 11##AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	0.999874	CTCF.p2:2:1.000
chr11	116750664	116750801	reg1005529.p1	13.458	+	X00566 TSC_hg19_v1_chr11_-_116708339 AX752114 AX752116 BC005380 NM_000039 AK292231 BC110286	-42377	-	TSC_hg19_v1_chr11_+_116700622 BC121081 BC134419 NM_000040 BC027977	-50108	+	HQ258218 HQ258399 BC113594 BC113596 BC074764 X13629 M13654 NM_000482 TSC_hg19_v1_chr11_-_116694025	-56766	-	BC128511 BC128510 NM_025164 BC121188 TSC_hg19_v1_chr11_-_116969081	218301	-	TSC_hg19_v1_chr11_+_117015002 NM_001184746 NM_001184747 NM_001184748 NM_002572 AK292973 AK307366 BC000398 BC019301 BC039721 D63390 BC001774 DQ836738 DQ836739 DQ836740 DQ836741 DQ836742 DQ836743	264301	+	TSC_hg19_v1_chr11_+_117049458 AK292501	298825	+	X00566|APOA1|335|apolipoprotein A-I##BC005380|APOA1|335|apolipoprotein A-I##NM_000039|APOA1|335|apolipoprotein A-I##AK292231|APOA1|335|apolipoprotein A-I##BC110286|APOA1|335|apolipoprotein A-I##BC121081|APOC3|345|apolipoprotein C-III##BC134419|APOC3|345|apolipoprotein C-III##NM_000040|APOC3|345|apolipoprotein C-III##BC027977|APOC3|345|apolipoprotein C-III##HQ258218|APOA4|337|apolipoprotein A-IV##HQ258399|APOA4|337|apolipoprotein A-IV##BC113594|APOA4|337|apolipoprotein A-IV##BC113596|APOA4|337|apolipoprotein A-IV##BC074764|APOA4|337|apolipoprotein A-IV##X13629|APOA4|337|apolipoprotein A-IV##M13654|APOA4|337|apolipoprotein A-IV##NM_000482|APOA4|337|apolipoprotein A-IV##BC128511|SIK3|23387|SIK family kinase 3##BC128510|SIK3|23387|SIK family kinase 3##NM_025164|SIK3|23387|SIK family kinase 3##BC121188|SIK3|23387|SIK family kinase 3##NM_001184746|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184747|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184748|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_002572|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292973|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK307366|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC000398|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC019301|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC039721|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##D63390|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC001774|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836738|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836739|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836740|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836741|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836742|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836743|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292501|SIDT2|51092|SID1 transmembrane family, member 2	0.989813	CTCF.p2:-3:0.990
chr12	122211248	122211358	reg1004008.p1	13.458	+	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	-60559	+	BC057760 NM_173855	-103744	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	-146660	+	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	20271	-	TSC_hg19_v1_chr12_-_122240852 AK311480	29554	-	TSC_hg19_v1_chr12_+_122242580 NM_015048 JF813787	31308	+	AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_015048|SETD1B|23067|SET domain containing 1B##JF813787|SETD1B|23067|SET domain containing 1B	0.731347	CTCF.p2:18:0.714
chr6	35490742	35490884	reg1003782.p1	13.458	+	CU689498 EU446712 BC065261 NM_003322 BC032714 BC001761 BC021268 AB593124 AB593123 DQ426893	-10139	-	BC010053 BC027877 BC091488 AF142482 TSC_hg19_v1_chr6_-_35464854 NM_003214	-26001	-	AB082926 BC006791 U12404 TSC_hg19_v1_chr6_+_35436204 BC011366	-54610	+	TSC_hg19_v1_chr6_-_35656616 HM245391 AB209893	165807	-	TSC_hg19_v1_chr6_-_35656693 BC111050 AK222807 AK302704 AK303356 AK312422 BX647390 NM_001145776 AF194172 U71321 NM_001145777 NM_004117	165893	-	BC042605 NM_001145775	205546	-	EU446712|TULP1|7287|tubby like protein 1##BC065261|TULP1|7287|tubby like protein 1##NM_003322|TULP1|7287|tubby like protein 1##BC032714|TULP1|7287|tubby like protein 1##AB593124|TULP1|7287|tubby like protein 1##AB593123|TULP1|7287|tubby like protein 1##DQ426893|TULP1|7287|tubby like protein 1##BC010053|TEAD3|7005|TEA domain family member 3##BC027877|TEAD3|7005|TEA domain family member 3##BC091488|TEAD3|7005|TEA domain family member 3##AF142482|TEAD3|7005|TEA domain family member 3##NM_003214|TEAD3|7005|TEA domain family member 3##AB082926|RPL10A|4736|ribosomal protein L10a##BC006791|RPL10A|4736|ribosomal protein L10a##U12404|RPL10A|4736|ribosomal protein L10a##BC011366|RPL10A|4736|ribosomal protein L10a##HM245391|FKBP5|2289|FK506 binding protein 5##AB209893|FKBP5|2289|FK506 binding protein 5##BC111050|FKBP5|2289|FK506 binding protein 5##AK222807|FKBP5|2289|FK506 binding protein 5##AK302704|FKBP5|2289|FK506 binding protein 5##AK303356|FKBP5|2289|FK506 binding protein 5##AK312422|FKBP5|2289|FK506 binding protein 5##BX647390|FKBP5|2289|FK506 binding protein 5##NM_001145776|FKBP5|2289|FK506 binding protein 5##AF194172|FKBP5|2289|FK506 binding protein 5##U71321|FKBP5|2289|FK506 binding protein 5##NM_001145777|FKBP5|2289|FK506 binding protein 5##NM_004117|FKBP5|2289|FK506 binding protein 5##BC042605|FKBP5|2289|FK506 binding protein 5##NM_001145775|FKBP5|2289|FK506 binding protein 5	0.998433	CTCF.p2:-35:0.998
chr19	39378228	39378348	reg1003685.p1	13.457	+	TSC_hg19_v1_chr19_-_39368901 AK127808 AK126119 AK298327 NM_001195833 NM_198445	-9378	-	TSC_hg19_v1_chr19_-_39342988 AK292115 NM_001005335 AK301062	-35312	-	AB587509 TSC_hg19_v1_chr19_-_39340622 AB044547 NM_001533	-37663	-	TSC_hg19_v1_chr19_+_39390332 NM_001243116 AB362577	12013	+	TSC_hg19_v1_chr19_-_39390229 AK314492 AB009274 AF160214 AY030277 AF095714 AK025876 AK225824 AK054642 AK094810 BC003012 BC003547 AF083107 NM_012237 NM_001193286 NM_030593	12046	-	TSC_hg19_v1_chr19_+_39390569 NM_002503	12280	+	AK127808|RINL|126432|Ras and Rab interactor-like##AK126119|RINL|126432|Ras and Rab interactor-like##AK298327|RINL|126432|Ras and Rab interactor-like##NM_001195833|RINL|126432|Ras and Rab interactor-like##NM_198445|RINL|126432|Ras and Rab interactor-like##AK292115|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##NM_001005335|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AK301062|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AB044547|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##NM_001533|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##NM_001243116|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##AK314492|SIRT2|22933|sirtuin 2##AB009274|SIRT2|22933|sirtuin 2##AF160214|SIRT2|22933|sirtuin 2##AY030277|SIRT2|22933|sirtuin 2##AF095714|SIRT2|22933|sirtuin 2##AK025876|SIRT2|22933|sirtuin 2##AK225824|SIRT2|22933|sirtuin 2##AK054642|SIRT2|22933|sirtuin 2##AK094810|SIRT2|22933|sirtuin 2##BC003012|SIRT2|22933|sirtuin 2##BC003547|SIRT2|22933|sirtuin 2##AF083107|SIRT2|22933|sirtuin 2##NM_012237|SIRT2|22933|sirtuin 2##NM_001193286|SIRT2|22933|sirtuin 2##NM_030593|SIRT2|22933|sirtuin 2##NM_002503|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta	0.866583	CTCF.p2:11:0.848
chr2	85512705	85512841	reg1005731.p1	13.455	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	-152114	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	-314282	+	TSC_hg19_v1_chr2_+_85198299 NM_020122	-314489	+	TSC_hg19_v1_chr2_-_85555100 CU678967 EU176441 EU176775 X94333 BC028219	42299	-	AK223063 TSC_hg19_v1_chr2_-_85555113 AK126465 AK222829 BX640733 AK312479 BC008461 AF027515 AF027516 U62390	42357	-	TSC_hg19_v1_chr2_-_85555373 BX640868 NM_001206840 NM_001206841 NM_001206844 NM_006464	42615	-	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##EU176441|TGOLN2|10618|trans-golgi network protein 2##EU176775|TGOLN2|10618|trans-golgi network protein 2##X94333|TGOLN2|10618|trans-golgi network protein 2##BC028219|TGOLN2|10618|trans-golgi network protein 2##AK223063|TGOLN2|10618|trans-golgi network protein 2##AK126465|TGOLN2|10618|trans-golgi network protein 2##AK222829|TGOLN2|10618|trans-golgi network protein 2##BX640733|TGOLN2|10618|trans-golgi network protein 2##AK312479|TGOLN2|10618|trans-golgi network protein 2##BC008461|TGOLN2|10618|trans-golgi network protein 2##AF027515|TGOLN2|10618|trans-golgi network protein 2##AF027516|TGOLN2|10618|trans-golgi network protein 2##U62390|TGOLN2|10618|trans-golgi network protein 2##BX640868|TGOLN2|10618|trans-golgi network protein 2##NM_001206840|TGOLN2|10618|trans-golgi network protein 2##NM_001206841|TGOLN2|10618|trans-golgi network protein 2##NM_001206844|TGOLN2|10618|trans-golgi network protein 2##NM_006464|TGOLN2|10618|trans-golgi network protein 2	0.996967	CTCF.p2:0:0.997
chrX	53346806	53346919	reg1005468.p1	13.455	+	TSC_hg19_v1_chrX_-_53310765 BC038213 BC108674 FJ154891 FJ154890 AK095232 NM_001243197 NM_015075	-36063	-	L25270 NM_001146702 NM_004187 TSC_hg19_v1_chrX_-_53254729	-92196	-	BC054499 BC047751 TSC_hg19_v1_chrX_-_53254393 AK308077 AK304732	-92475	-	AB011094 NM_001111125 TSC_hg19_v1_chrX_-_53350549	3687	-	BX640922 TSC_hg19_v1_chrX_-_53449153	102281	-	D80000 AB385291 HQ258690 AF176781 S78271 TSC_hg19_v1_chrX_-_53449604 BC046147 AK301266 BC064368	102715	-	BC038213|IQSEC2|23096|IQ motif and Sec7 domain 2##BC108674|IQSEC2|23096|IQ motif and Sec7 domain 2##FJ154891|IQSEC2|23096|IQ motif and Sec7 domain 2##FJ154890|IQSEC2|23096|IQ motif and Sec7 domain 2##AK095232|IQSEC2|23096|IQ motif and Sec7 domain 2##NM_001243197|IQSEC2|23096|IQ motif and Sec7 domain 2##NM_015075|IQSEC2|23096|IQ motif and Sec7 domain 2##L25270|KDM5C|8242|lysine (K)-specific demethylase 5C##NM_001146702|KDM5C|8242|lysine (K)-specific demethylase 5C##NM_004187|KDM5C|8242|lysine (K)-specific demethylase 5C##BC054499|KDM5C|8242|lysine (K)-specific demethylase 5C##BC047751|KDM5C|8242|lysine (K)-specific demethylase 5C##AK308077|KDM5C|8242|lysine (K)-specific demethylase 5C##AK304732|KDM5C|8242|lysine (K)-specific demethylase 5C##AB011094|IQSEC2|23096|IQ motif and Sec7 domain 2##NM_001111125|IQSEC2|23096|IQ motif and Sec7 domain 2##BX640922|SMC1A|8243|structural maintenance of chromosomes 1A##D80000|SMC1A|8243|structural maintenance of chromosomes 1A##HQ258690|SMC1A|8243|structural maintenance of chromosomes 1A##AF176781|SMC1A|8243|structural maintenance of chromosomes 1A##S78271|SMC1A|8243|structural maintenance of chromosomes 1A##AK301266|SMC1A|8243|structural maintenance of chromosomes 1A##BC064368|SMC1A|8243|structural maintenance of chromosomes 1A	0.860915	CTCF.p2:-2:0.861
chr11	111648138	111648249	reg1003936.p2	13.453	+	AB384965 DQ890606 DQ894107 EU176538 AK292275 AK293388 AK294716 TSC_hg19_v1_chr11_-_111637114 BC027596 AK296455 AK301705 AF087438 AF163473 NM_001177562 NM_001177563 NM_002716 NM_181699 NM_181700	-11067	-	M65254 TSC_hg19_v1_chr11_-_111637059	-11163	-	TSC_hg19_v1_chr11_+_111473176 NM_015191 AK291233 AL136764 AB018324 AB096248 AK000396 BC113459 BC117183 AB084424	-174960	+	TSC_hg19_v1_chr11_-_111742001 NM_001077691 NM_001077692	93825	-	TSC_hg19_v1_chr11_-_111742285 DQ892761 DQ896006 AM393011 AM393178 AB527104 CU679277 AL136927 BC009255 AF395532 AK308025 AK225261 AK298811 AK025498 NM_001077690 NM_024740	94062	-	AK300795 BC006136 TSC_hg19_v1_chr11_-_111749888 BC127680	101665	-	DQ890606|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##DQ894107|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##EU176538|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK292275|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK293388|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK294716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##BC027596|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK296455|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK301705|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF087438|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF163473|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177562|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177563|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_002716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181699|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181700|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##M65254|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_015191|SIK2|23235|salt-inducible kinase 2##AK291233|SIK2|23235|salt-inducible kinase 2##AL136764|SIK2|23235|salt-inducible kinase 2##AB018324|SIK2|23235|salt-inducible kinase 2##AB096248|SIK2|23235|salt-inducible kinase 2##AK000396|SIK2|23235|salt-inducible kinase 2##BC113459|SIK2|23235|salt-inducible kinase 2##BC117183|SIK2|23235|salt-inducible kinase 2##AB084424|SIK2|23235|salt-inducible kinase 2##NM_001077691|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_001077692|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##DQ892761|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##DQ896006|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AM393011|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AM393178|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AL136927|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##BC009255|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AF395532|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK308025|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK225261|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK298811|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK025498|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_001077690|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_024740|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK300795|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1##BC006136|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1##BC127680|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	0.993501	CTCF.p2:3:0.994
chr14	102173782	102173891	reg1002875.p1	13.453	+	BX161470 NM_001362 S79854 TSC_hg19_v1_chr14_+_102027831 AK292310 BC017717	-146073	+	BC150617 NM_001134888	-822653	-	AK092707 TSC_hg19_v1_chr14_+_101300861	-873001	+	NM_001161725 NM_001161726 TSC_hg19_v1_chr14_+_102228166 AL834350 BC051442 AK131391 AK302470	54350	+	TSC_hg19_v1_chr14_+_102276171 NM_002719 NM_178586 NM_178587 AK295449 AK315072 Z69030 U37352 BC016183	102347	+	AB451341 CU677587 D26445 AB463199 L42375 TSC_hg19_v1_chr14_+_102276338	102473	+	BX161470|DIO3|1735|deiodinase, iodothyronine, type III##NM_001362|DIO3|1735|deiodinase, iodothyronine, type III##S79854|DIO3|1735|deiodinase, iodothyronine, type III##BC017717|DIO3|1735|deiodinase, iodothyronine, type III##BC150617|RTL1|388015|retrotransposon-like 1##NM_001134888|RTL1|388015|retrotransposon-like 1##AK092707|MEG3|55384|maternally expressed 3 (non-protein coding)##NM_001161725|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_001161726|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AL834350|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC051442|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK131391|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK302470|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_002719|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178586|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178587|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK315072|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##Z69030|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##U37352|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC016183|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AB451341|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##D26445|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##L42375|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	0.997994	CTCF.p2:-22:0.998
chr17	47633800	47633927	reg1003985.p2	13.453	+	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	-61175	+	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	-141615	-	BC095460 TSC_hg19_v1_chr17_-_47492215	-141648	-	TSC_hg19_v1_chr17_+_47653192 AL834282 NM_007225	19373	+	TSC_hg19_v1_chr17_+_47653475 BC022541 AK308928 AY358526 AB385434	19664	+	TSC_hg19_v1_chr17_-_47755471 BC003385 AK222589 AK312691 AJ000644 AK303268 AK316366 BC001269 AK293587 AK300616 NM_001007226 NM_001007227 NM_001007228 NM_001007229 NM_001007230 NM_003563	121569	-	AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##BC095460|PHB|5245|prohibitin##AL834282|NXPH3|11248|neurexophilin 3##NM_007225|NXPH3|11248|neurexophilin 3##BC022541|NXPH3|11248|neurexophilin 3##AK308928|NXPH3|11248|neurexophilin 3##AY358526|NXPH3|11248|neurexophilin 3##BC003385|SPOP|8405|speckle-type POZ protein##AK222589|SPOP|8405|speckle-type POZ protein##AK312691|SPOP|8405|speckle-type POZ protein##AJ000644|SPOP|8405|speckle-type POZ protein##AK303268|SPOP|8405|speckle-type POZ protein##AK316366|SPOP|8405|speckle-type POZ protein##BC001269|SPOP|8405|speckle-type POZ protein##AK293587|SPOP|8405|speckle-type POZ protein##AK300616|SPOP|8405|speckle-type POZ protein##NM_001007226|SPOP|8405|speckle-type POZ protein##NM_001007227|SPOP|8405|speckle-type POZ protein##NM_001007228|SPOP|8405|speckle-type POZ protein##NM_001007229|SPOP|8405|speckle-type POZ protein##NM_001007230|SPOP|8405|speckle-type POZ protein##NM_003563|SPOP|8405|speckle-type POZ protein	0.993369	CTCF.p2:8:0.993
chr20	56070381	56070515	reg1005638.p1	13.453	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-103991	+	NM_001190472	-135571	-	AK292247 AY349350 NM_001015885	-143847	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	29753	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	65709	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	125090	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.971934	CTCF.p2:17:0.972
chr2	138668235	138668388	reg1003823.p1	13.452	+	NM_001080427	-919850	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-1145195	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-1792635	-	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	53623	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	591082	+	TSC_hg19_v1_chr2_+_139259500 AK021919	591179	+	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like	0.67052	CTCF.p2:-5:0.671
chr13	48348397	48348531	reg1005493.p1	13.450	+	AK314132 BX647777 AK302787 NM_000621 NM_001165947	-877397	-	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	-977149	-	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-1220957	+	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	226987	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	263350	+	TSC_hg19_v1_chr13_-_48612129 AK316271	263644	-	AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##AK316271|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.015638	
chr9	116917659	116917768	reg1004469.p1	13.450	+	BC036824 TSC_hg19_v1_chr9_-_116861573	-56171	-	BC010626 NM_138424	-56377	-	TSC_hg19_v1_chr9_-_116840705 AK310776 BC041593 NM_001633	-76999	-	TSC_hg19_v1_chr9_+_116917816 BC035728	98	+	AY149237 NM_032888	517	+	TSC_hg19_v1_chr9_+_116930778 AB058773	13119	+	BC036824|KIF12|113220|kinesin family member 12##BC010626|KIF12|113220|kinesin family member 12##NM_138424|KIF12|113220|kinesin family member 12##AK310776|AMBP|259|alpha-1-microglobulin/bikunin precursor##BC041593|AMBP|259|alpha-1-microglobulin/bikunin precursor##NM_001633|AMBP|259|alpha-1-microglobulin/bikunin precursor##BC035728|COL27A1|85301|collagen, type XXVII, alpha 1##AY149237|COL27A1|85301|collagen, type XXVII, alpha 1##NM_032888|COL27A1|85301|collagen, type XXVII, alpha 1##AB058773|COL27A1|85301|collagen, type XXVII, alpha 1	1.829752	CTCF.p2:-2:0.995	CTCF.p2:17:0.835
chr17	71706417	71706554	reg1005596.p1	13.449	+	NM_001144952	-66259	-	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-398345	-	BC157870 NM_001129885	-448467	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	493330	+	TSC_hg19_v1_chr17_+_72199849 BC000603	493368	+	TSC_hg19_v1_chr17_+_72209709 NM_032646 BC107492 BC107602 AK315163 AF319952 BC005168	503184	+	NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38##NM_032646|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107492|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107602|TTYH2|94015|tweety homolog 2 (Drosophila)##AK315163|TTYH2|94015|tweety homolog 2 (Drosophila)##AF319952|TTYH2|94015|tweety homolog 2 (Drosophila)##BC005168|TTYH2|94015|tweety homolog 2 (Drosophila)	0.984665	CTCF.p2:1:0.985
chr5	1641824	1641952	reg1004494.p1	13.449	+	TSC_hg19_v1_chr5_-_1634100 BC019918 BC045555 AK311210 AK311251	-7770	-	TSC_hg19_v1_chr5_-_1634097 BC020552 BC053586 BC044220 AK308990 AK315872 BC067863 BC014604 AK307076	-7819	-	TSC_hg19_v1_chr5_-_1594617 BC150558	-47257	-	TSC_hg19_v1_chr5_-_1799926 AB049654 AF151109 AF155653 BC020642	158035	-	TSC_hg19_v1_chr5_-_1799952 AK312001 BC104652 EF036487 NM_032479	158084	-	TSC_hg19_v1_chr5_+_1801520 NM_004553 AK022503 BC038664 AF044959 BC046155 CR456880 HQ257915	159624	+	BC019918|LOC728613|728613|programmed cell death 6 pseudogene##BC045555|LOC728613|728613|programmed cell death 6 pseudogene##AK311210|LOC728613|728613|programmed cell death 6 pseudogene##BC020552|LOC728613|728613|programmed cell death 6 pseudogene##BC053586|LOC728613|728613|programmed cell death 6 pseudogene##BC044220|LOC728613|728613|programmed cell death 6 pseudogene##AK308990|LOC728613|728613|programmed cell death 6 pseudogene##BC067863|LOC728613|728613|programmed cell death 6 pseudogene##BC014604|LOC728613|728613|programmed cell death 6 pseudogene##AK307076|LOC728613|728613|programmed cell death 6 pseudogene##BC150558|SDHAP3|728609|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3##AB049654|MRPL36|64979|mitochondrial ribosomal protein L36##AF151109|MRPL36|64979|mitochondrial ribosomal protein L36##AF155653|MRPL36|64979|mitochondrial ribosomal protein L36##BC020642|MRPL36|64979|mitochondrial ribosomal protein L36##AK312001|MRPL36|64979|mitochondrial ribosomal protein L36##BC104652|MRPL36|64979|mitochondrial ribosomal protein L36##EF036487|MRPL36|64979|mitochondrial ribosomal protein L36##NM_032479|MRPL36|64979|mitochondrial ribosomal protein L36##NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	0.202977	CTCF.p2:20:0.203
chr5	176087930	176088043	reg1003915.p1	13.448	+	TSC_hg19_v1_chr5_+_176074497 AK024427 BC067105 BC010405 AF174603 CU679699 CU688248	-13434	+	NM_001006616 NM_012171 NM_130465 TSC_hg19_v1_chr5_+_176074470 AY037146	-13556	+	NM_001099408	-30304	+	TSC_hg19_v1_chr5_+_176237521 AK131380 NM_133369 BC157824	149569	+	U51333 BC028129 NM_002115	238337	-	AK304794 BX537376 NM_016290 AK023044 BC032561 BC006078 BC014069 AF349313 NM_001199297 NM_001199298 TSC_hg19_v1_chr5_-_176433806	345602	-	AK024427|TSPAN17|26262|tetraspanin 17##BC067105|TSPAN17|26262|tetraspanin 17##BC010405|TSPAN17|26262|tetraspanin 17##AF174603|TSPAN17|26262|tetraspanin 17##NM_001006616|TSPAN17|26262|tetraspanin 17##NM_012171|TSPAN17|26262|tetraspanin 17##NM_130465|TSPAN17|26262|tetraspanin 17##AY037146|TSPAN17|26262|tetraspanin 17##NM_001099408|EIF4E1B|253314|eukaryotic translation initiation factor 4E family member 1B##AK131380|UNC5A|90249|unc-5 homolog A (C. elegans)##NM_133369|UNC5A|90249|unc-5 homolog A (C. elegans)##BC157824|UNC5A|90249|unc-5 homolog A (C. elegans)##U51333|HK3|3101|hexokinase 3 (white cell)##BC028129|HK3|3101|hexokinase 3 (white cell)##NM_002115|HK3|3101|hexokinase 3 (white cell)##AK304794|UIMC1|51720|ubiquitin interaction motif containing 1##BX537376|UIMC1|51720|ubiquitin interaction motif containing 1##NM_016290|UIMC1|51720|ubiquitin interaction motif containing 1##AK023044|UIMC1|51720|ubiquitin interaction motif containing 1##BC032561|UIMC1|51720|ubiquitin interaction motif containing 1##BC006078|UIMC1|51720|ubiquitin interaction motif containing 1##AF349313|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199297|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199298|UIMC1|51720|ubiquitin interaction motif containing 1	0.99988	CTCF.p2:-6:1.000
chr7	149439374	149439494	reg1003502.p1	13.447	+	TSC_hg19_v1_chr7_+_149412043 BC142722 BC146667 AB058765 BC150330 BC152409 NM_032534	-27347	+	TSC_hg19_v1_chr7_-_149321856 BC047675	-117580	-	AB590454 AK295771 TSC_hg19_v1_chr7_-_149321793 AK022762	-117692	-	BC052625 NM_207336 BC038972	30866	-	NM_198455	33696	+	BC092506 TSC_hg19_v1_chr7_+_149535500 AK054924	96056	+	BC142722|KRBA1|84626|KRAB-A domain containing 1##BC146667|KRBA1|84626|KRAB-A domain containing 1##AB058765|KRBA1|84626|KRAB-A domain containing 1##BC150330|KRBA1|84626|KRAB-A domain containing 1##BC152409|KRBA1|84626|KRAB-A domain containing 1##NM_032534|KRBA1|84626|KRAB-A domain containing 1##BC047675|ZNF767|79970|zinc finger family member 767##AK295771|ZNF767|79970|zinc finger family member 767##AK022762|ZNF767|79970|zinc finger family member 767##BC052625|ZNF467|168544|zinc finger protein 467##NM_207336|ZNF467|168544|zinc finger protein 467##BC038972|ZNF467|168544|zinc finger protein 467##NM_198455|SSPO|23145|SCO-spondin homolog (Bos taurus)##BC092506|ZNF862|643641|zinc finger protein 862##AK054924|ZNF862|643641|zinc finger protein 862	0.998387	CTCF.p2:4:0.998
chr9	79273603	79273735	reg1005138.p1	13.447	+	AY196297 NM_001097636	-158121	+	AY196296 NM_001097635	-180413	+	NM_001097633 NM_001490 TSC_hg19_v1_chr9_+_79074142 AY196294 AY196295 AL832647	-199553	+	AB535152 FJ808772 FJ808773 BC019095 NM_015225 TSC_hg19_v1_chr9_-_79521026	247283	-	NM_001013735	360901	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	518670	+	AY196297|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097636|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097633|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001490|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196294|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196295|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AL832647|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AB535152|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808772|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808773|PRUNE2|158471|prune homolog 2 (Drosophila)##BC019095|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_015225|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_001013735|FOXB2|442425|forkhead box B2##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)	0.321922	CTCF.p2:17:0.322
chr1	8621249	8621378	reg1004951.p1	13.446	+	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	-137296	-	NM_001080397	-236924	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-534915	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	256279	-	GU170215 NM_001201483	310321	-	BC001810 TSC_hg19_v1_chr1_-_8938710 AK098420 M14328 BC011130	317394	-	AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##GU170215|ENO1|2023|enolase 1, (alpha)##NM_001201483|ENO1|2023|enolase 1, (alpha)##BC001810|ENO1|2023|enolase 1, (alpha)##AK098420|ENO1|2023|enolase 1, (alpha)##M14328|ENO1|2023|enolase 1, (alpha)##BC011130|ENO1|2023|enolase 1, (alpha)	0.0	
chr9	4549237	4549340	reg1003597.p2	13.446	+	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	-58851	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-249257	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-249325	-	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	113023	+	AK295831 NM_001039395	117381	-	TSC_hg19_v1_chr9_+_4679596 AK000497 NM_017913 AK000646 AK225510 BC014133 CU680796	130373	+	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68##AK000497|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##NM_017913|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK000646|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK225510|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##BC014133|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1	0.335251	CTCF.p2:-1:0.335
chr17	62067870	62067991	reg1003971.p3	13.443	+	AY212253 M81758 NM_000334	-17692	-	S52229 S79249 X83539 M80461 BC032651 BC002975 BC030210 AX775815 AX775817 AK222954 AK313583 AK223210 NM_000626 NM_001039933 NM_021602 M89957	-58264	-	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	-71764	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	7832	+	NM_000873 TSC_hg19_v1_chr17_-_62084314	16375	-	TSC_hg19_v1_chr17_-_62097985 AK295382 AK309953 NM_001099786 NM_001099787 NM_001099788 NM_001099789	30052	-	AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##S52229|CD79B|974|CD79b molecule, immunoglobulin-associated beta##S79249|CD79B|974|CD79b molecule, immunoglobulin-associated beta##X83539|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M80461|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC032651|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC002975|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC030210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775815|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775817|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK222954|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK313583|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK223210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_000626|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_001039933|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_021602|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M89957|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##NM_000873|ICAM2|3384|intercellular adhesion molecule 2##AK295382|ICAM2|3384|intercellular adhesion molecule 2##NM_001099786|ICAM2|3384|intercellular adhesion molecule 2##NM_001099787|ICAM2|3384|intercellular adhesion molecule 2##NM_001099788|ICAM2|3384|intercellular adhesion molecule 2##NM_001099789|ICAM2|3384|intercellular adhesion molecule 2	1.053309	CTCF.p2:2:0.952
chr3	141363823	141363930	reg1004484.p1	13.443	+	TSC_hg19_v1_chr3_+_141205882 AK292016 AK301015 AF115573 D78155 D82880 NM_006506	-158005	+	AK311479 TSC_hg19_v1_chr3_+_141105293	-258588	+	TSC_hg19_v1_chr3_+_141087345 AK311501	-276519	+	TSC_hg19_v1_chr3_+_141457045 NM_001201370 NM_014245 NM_183237	93193	+	TSC_hg19_v1_chr3_+_141457129 AK311982	93244	+	TSC_hg19_v1_chr3_+_141457160 BC008627 BC005966 DQ891759 DQ894943 AB590187 AF092878 AF142060 AF312226 AK289894 BT007348	93284	+	AK292016|RASA2|5922|RAS p21 protein activator 2##AK301015|RASA2|5922|RAS p21 protein activator 2##AF115573|RASA2|5922|RAS p21 protein activator 2##D78155|RASA2|5922|RAS p21 protein activator 2##D82880|RASA2|5922|RAS p21 protein activator 2##NM_006506|RASA2|5922|RAS p21 protein activator 2##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001201370|RNF7|9616|ring finger protein 7##NM_014245|RNF7|9616|ring finger protein 7##NM_183237|RNF7|9616|ring finger protein 7##AK311982|RNF7|9616|ring finger protein 7##BC008627|RNF7|9616|ring finger protein 7##BC005966|RNF7|9616|ring finger protein 7##DQ891759|RNF7|9616|ring finger protein 7##DQ894943|RNF7|9616|ring finger protein 7##AF092878|RNF7|9616|ring finger protein 7##AF142060|RNF7|9616|ring finger protein 7##AF312226|RNF7|9616|ring finger protein 7##BT007348|RNF7|9616|ring finger protein 7	0.036769	
chr7	102278973	102279091	reg1003787.p1	13.443	+	TSC_hg19_v1_chr7_-_102257205 AK026441 AK310176 NM_001079877 NM_006989 AY029206	-21808	-	HQ258652 BC110873 TSC_hg19_v1_chr7_-_102257170 AB011110 BC113663 BC143584 BC143585 AK308653	-21875	-	AF468111 BC110985 TSC_hg19_v1_chr7_-_102213031 AB209398 BC141857 AK309487 NM_001097615	-65992	-	EU341824 NM_001114403 AK296589	4244	-	AK302217 NM_001031618 NM_001166339	11739	+	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	33088	-	AK026441|RASA4|10156|RAS p21 protein activator 4##AK310176|RASA4|10156|RAS p21 protein activator 4##NM_001079877|RASA4|10156|RAS p21 protein activator 4##NM_006989|RASA4|10156|RAS p21 protein activator 4##HQ258652|RASA4|10156|RAS p21 protein activator 4##BC110873|RASA4|10156|RAS p21 protein activator 4##AB011110|RASA4|10156|RAS p21 protein activator 4##BC113663|RASA4|10156|RAS p21 protein activator 4##BC143584|RASA4|10156|RAS p21 protein activator 4##BC143585|RASA4|10156|RAS p21 protein activator 4##AK308653|RASA4|10156|RAS p21 protein activator 4##AF468111|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AB209398|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_001097615|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##EU341824|UPK3BL|100134938|uroplakin 3B-like##NM_001114403|UPK3BL|100134938|uroplakin 3B-like##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2	0.987588	CTCF.p2:0:0.988
chr12	8543215	8543315	reg1003425.p2	13.442	+	BC042608 AK001270 NM_018088	-163062	-	TSC_hg19_v1_chr12_+_8332811 AK096301 BC048994 AK311411 BC034777	-210439	+	NM_001004328	-218116	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	65337	+	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	122966	+	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	150209	-	BC042608|FAM90A1|55138|family with sequence similarity 90, member A1##AK001270|FAM90A1|55138|family with sequence similarity 90, member A1##NM_018088|FAM90A1|55138|family with sequence similarity 90, member A1##AK096301|FAM66C|440078|family with sequence similarity 66, member C##BC048994|FAM66C|440078|family with sequence similarity 66, member C##BC034777|FAM66C|440078|family with sequence similarity 66, member C##NM_001004328|ZNF705A|440077|zinc finger protein 705A##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E	0.999894	CTCF.p2:-7:1.000
chr15	52371198	52371335	reg1004260.p2	13.442	+	TSC_hg19_v1_chr15_+_52311442 BC035492	-59805	+	TSC_hg19_v1_chr15_+_52311432 CR749401	-59832	+	TSC_hg19_v1_chr15_+_52311425 NM_002748	-59847	+	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	33680	-	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	100875	-	TSC_hg19_v1_chr15_+_52472257 AF007131	101069	+	BC035492|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##NM_002748|MAPK6|5597|mitogen-activated protein kinase 6##AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973	0.968753	CTCF.p2:0:0.969
chr11	5145398	5145540	reg1005525.p1	13.440	+	NM_001005164	-64613	-	NM_001001916	-77714	+	AB463974 NM_001004755	-125257	+	AY726590 NM_001005160 AB463976	8370	-	AB463975 BC111691 BC111722 NM_012375	28129	-	NM_001004760 AB528808	76460	-	NM_001005164|OR52E2|119678|olfactory receptor, family 52, subfamily E, member 2##NM_001001916|OR52J3|119679|olfactory receptor, family 52, subfamily J, member 3##NM_001004755|OR51L1|119682|olfactory receptor, family 51, subfamily L, member 1##AY726590|OR52A5|390054|olfactory receptor, family 52, subfamily A, member 5##NM_001005160|OR52A5|390054|olfactory receptor, family 52, subfamily A, member 5##BC111691|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1##BC111722|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1##NM_012375|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1##NM_001004760|OR51V1|283111|olfactory receptor, family 51, subfamily V, member 1	0.997096	CTCF.p2:9:0.997
chr6	2912044	2912170	reg1004278.p2	13.440	+	TSC_hg19_v1_chr6_-_2903544 BC002538 AB060690 L40378 AK314842 NM_004155	-8599	-	TSC_hg19_v1_chr6_-_2842202 AK304641 AK309765	-69910	-	TSC_hg19_v1_chr6_-_2842095 BC009015 NM_030666 M93056 AK298044 AK312973 AK223370 AK291327	-70025	-	AK098566 TSC_hg19_v1_chr6_-_2971511	59307	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	59704	-	TSC_hg19_v1_chr6_-_2971981 AK314578	59942	-	BC002538|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AB060690|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##L40378|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK314842|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##NM_004155|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK304641|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK309765|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK098566|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314578|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6	0.991854	CTCF.p2:11:0.992
chr17	74299333	74299466	reg1005846.p1	13.439	+	TSC_hg19_v1_chr17_+_74261431 BC035511 EU176314	-37892	+	TSC_hg19_v1_chr17_+_74261282 BC060859 NM_182565	-38115	+	AK091467 AX747002 AB067504 NM_052916 TSC_hg19_v1_chr17_-_74236615	-62951	-	EU832276 EU832361 BC131559 AL136774 NM_032134	4271	-	TSC_hg19_v1_chr17_-_74349591 CU679229 BC009012	50250	-	TSC_hg19_v1_chr17_-_74349948 D61391 AK312637	50530	-	BC035511|FAM100B|283991|family with sequence similarity 100, member B##EU176314|FAM100B|283991|family with sequence similarity 100, member B##BC060859|FAM100B|283991|family with sequence similarity 100, member B##NM_182565|FAM100B|283991|family with sequence similarity 100, member B##AK091467|RNF157|114804|ring finger protein 157##AB067504|RNF157|114804|ring finger protein 157##NM_052916|RNF157|114804|ring finger protein 157##EU832276|QRICH2|84074|glutamine rich 2##EU832361|QRICH2|84074|glutamine rich 2##BC131559|QRICH2|84074|glutamine rich 2##AL136774|QRICH2|84074|glutamine rich 2##NM_032134|QRICH2|84074|glutamine rich 2##BC009012|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1##D61391|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1##AK312637|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1	0.994548	CTCF.p2:-9:0.995
chr1	181135818	181135942	reg1004038.p1	13.438	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-78015	+	NM_016545	-78243	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-132730	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	316820	+	BC137223 BC137224 AK128654 NM_001009992	894917	-	TSC_hg19_v1_chr1_-_182354649 AK301600	1218802	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.881186	CTCF.p2:23:0.881
chr17	46882360	46882483	reg1005319.p1	13.438	+	CU689652 BC033563 NM_173623 AK310321	-10776	-	BT007410 AB464574 DQ893517 DQ896496 U57052 BC007092 BC070233 AK313266 AK225234 NM_006361 AY937237	-76385	-	BC030950 AF331165 NM_032391	-82541	-	AK097392 AK302952 BC041368 AL834151 NM_001130918	12003	-	NM_005831 AK293329 TSC_hg19_v1_chr17_+_46908406 AK293137 AK303313 AK304024 AK310648 AK314796 U22897 AK222666 AK223227 AK298177 BC004130	25969	+	AK095669 TSC_hg19_v1_chr17_+_46970178 NM_001002027 NM_005175 AL080089 AK311848 D13118	87764	+	BC033563|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_173623|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK310321|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BT007410|HOXB13|10481|homeobox B13##DQ893517|HOXB13|10481|homeobox B13##DQ896496|HOXB13|10481|homeobox B13##U57052|HOXB13|10481|homeobox B13##BC007092|HOXB13|10481|homeobox B13##BC070233|HOXB13|10481|homeobox B13##AK313266|HOXB13|10481|homeobox B13##AK225234|HOXB13|10481|homeobox B13##NM_006361|HOXB13|10481|homeobox B13##AY937237|HOXB13|10481|homeobox B13##BC030950|PRAC|84366|prostate cancer susceptibility candidate##AF331165|PRAC|84366|prostate cancer susceptibility candidate##NM_032391|PRAC|84366|prostate cancer susceptibility candidate##AK097392|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK302952|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC041368|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AL834151|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_001130918|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_005831|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293329|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293137|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK303313|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK304024|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK314796|CALCOCO2|10241|calcium binding and coiled-coil domain 2##U22897|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK222666|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK223227|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK298177|CALCOCO2|10241|calcium binding and coiled-coil domain 2##BC004130|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK095669|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_001002027|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_005175|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AL080089|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AK311848|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##D13118|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)	0.063256	
chr3	16219956	16220078	reg1003766.p2	13.438	+	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-3823	+	AB002377 NM_015199 TSC_hg19_v1_chr3_-_15901096	-319005	-	TSC_hg19_v1_chr3_-_15839678 AK293770 NM_001195098	-380335	-	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	86372	-	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	86691	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	335001	-	AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AB002377|ANKRD28|23243|ankyrin repeat domain 28##NM_015199|ANKRD28|23243|ankyrin repeat domain 28##AK293770|ANKRD28|23243|ankyrin repeat domain 28##NM_001195098|ANKRD28|23243|ankyrin repeat domain 28##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1	0.99949	CTCF.p2:7:0.999
chr4	129784740	129784900	reg1004233.p4	13.437	+	TSC_hg19_v1_chr4_+_129732427 BC032376	-52367	+	TSC_hg19_v1_chr4_+_129730875 NM_024900 NM_199320 AK027620 AF520952 AK304815 AK127326	-53950	+	AK131272 NM_006320	-574837	-	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	229770	-	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	230047	+	NM_001099783	232461	+	BC032376|PHF17|79960|PHD finger protein 17##NM_024900|PHF17|79960|PHD finger protein 17##NM_199320|PHF17|79960|PHD finger protein 17##AK027620|PHF17|79960|PHD finger protein 17##AF520952|PHF17|79960|PHD finger protein 17##AK304815|PHF17|79960|PHD finger protein 17##AK127326|PHF17|79960|PHD finger protein 17##AK131272|PGRMC2|10424|progesterone receptor membrane component 2##NM_006320|PGRMC2|10424|progesterone receptor membrane component 2##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33	0.745761	CTCF.p2:6:0.746
chr1	161197273	161197405	reg1005147.p1	13.436	+	NM_032174 TSC_hg19_v1_chr1_+_161195849 AK022832 AK027704 AK297848 BX537951 AK297831	-1482	+	TSC_hg19_v1_chr1_-_161193419 AK312034 BC005282 NM_001643	-3941	-	BT006786 AB590164 DQ892493 DQ895705 AB106565 M29882 X00955 TSC_hg19_v1_chr1_-_161193333	-4076	-	AK310773 AY572806 AY572807 AY572808 AY572809 AY572810 AY572811 AY572812 AY572813 AY572814 AY572815 AY572816 AY572817 AY572818 AY572819 AY572820 AY572821 AY572822 AY572823 AY572824 AY572825 AY572826 AY572827 BC121120 BC121121 BC030972 BC069626 BC069651 AK316208 AK303757 NM_001077469 NM_001077470 NM_001077471 NM_001077472 NM_001077473 NM_001077474 NM_001077475 NM_001077476 NM_001077477 NM_001077478 NM_001077479 NM_001077480 NM_001077481 NM_001077482 NM_005122 AK303796	10617	-	BC028905 NM_001102566 TSC_hg19_v1_chr1_+_161228534 BC067884 BC147003 BC147004	31226	+	BT006765 DQ895885 EU176378 S66705 D10537 BC006491 AK313555 TSC_hg19_v1_chr1_-_161279760 NM_000530	82403	-	NM_032174|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK022832|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK027704|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK297848|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##BX537951|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK297831|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK312034|APOA2|336|apolipoprotein A-II##BC005282|APOA2|336|apolipoprotein A-II##NM_001643|APOA2|336|apolipoprotein A-II##BT006786|APOA2|336|apolipoprotein A-II##DQ892493|APOA2|336|apolipoprotein A-II##DQ895705|APOA2|336|apolipoprotein A-II##AB106565|APOA2|336|apolipoprotein A-II##M29882|APOA2|336|apolipoprotein A-II##X00955|APOA2|336|apolipoprotein A-II##AK310773|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572806|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572807|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572808|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572809|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572810|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572811|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572812|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572813|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572814|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572815|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572816|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572817|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572818|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572819|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572820|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572821|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572822|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572823|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572824|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572825|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572826|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572827|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC121120|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC121121|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC030972|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC069626|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC069651|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK316208|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK303757|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077469|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077470|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077471|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077472|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077473|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077474|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077475|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077476|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077477|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077478|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077479|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077480|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077481|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077482|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_005122|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK303796|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC028905|PCP4L1|654790|Purkinje cell protein 4 like 1##NM_001102566|PCP4L1|654790|Purkinje cell protein 4 like 1##BC067884|PCP4L1|654790|Purkinje cell protein 4 like 1##BC147003|PCP4L1|654790|Purkinje cell protein 4 like 1##BC147004|PCP4L1|654790|Purkinje cell protein 4 like 1##BT006765|MPZ|4359|myelin protein zero##DQ895885|MPZ|4359|myelin protein zero##EU176378|MPZ|4359|myelin protein zero##S66705|MPZ|4359|myelin protein zero##D10537|MPZ|4359|myelin protein zero##BC006491|MPZ|4359|myelin protein zero##AK313555|MPZ|4359|myelin protein zero##NM_000530|MPZ|4359|myelin protein zero	0.997255	CTCF.p2:-8:0.997
chr12	48136117	48136250	reg1005111.p1	13.436	+	AK314688 BC069715 BC069698 BC074763 AX772808 AK300169 AK075446 BC111782 M32402 M36109 NM_001172439 NM_001172440 NM_006025	-16894	-	TSC_hg19_v1_chr12_-_48099819 NM_001146075 NM_001146076 NM_024604	-36352	-	TSC_hg19_v1_chr12_-_48099814 BC003680	-36369	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	16226	-	AK092448 NM_001098531	16691	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	30851	+	AK314688|ENDOU|8909|endonuclease, polyU-specific##BC069715|ENDOU|8909|endonuclease, polyU-specific##BC069698|ENDOU|8909|endonuclease, polyU-specific##BC074763|ENDOU|8909|endonuclease, polyU-specific##AX772808|ENDOU|8909|endonuclease, polyU-specific##AK300169|ENDOU|8909|endonuclease, polyU-specific##AK075446|ENDOU|8909|endonuclease, polyU-specific##BC111782|ENDOU|8909|endonuclease, polyU-specific##M32402|ENDOU|8909|endonuclease, polyU-specific##M36109|ENDOU|8909|endonuclease, polyU-specific##NM_001172439|ENDOU|8909|endonuclease, polyU-specific##NM_001172440|ENDOU|8909|endonuclease, polyU-specific##NM_006025|ENDOU|8909|endonuclease, polyU-specific##NM_001146075|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146076|RPAP3|79657|RNA polymerase II associated protein 3##NM_024604|RPAP3|79657|RNA polymerase II associated protein 3##BC003680|RPAP3|79657|RNA polymerase II associated protein 3##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1	0.999914	CTCF.p2:8:1.000
chr18	20284411	20284542	reg1005590.p1	13.436	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	-286651	-	X95701 BC027891 NM_005257 TSC_hg19_v1_chr18_+_19749549	-535000	+	AK123079 TSC_hg19_v1_chr18_-_19749029	-535490	-	TSC_hg19_v1_chr18_+_20513319 NM_002894 U72066 AK292481	228872	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	229339	+	EF028204 NM_001100619	431250	+	HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##X95701|GATA6|2627|GATA binding protein 6##BC027891|GATA6|2627|GATA binding protein 6##NM_005257|GATA6|2627|GATA binding protein 6##AK123079|LOC100128893|100128893|uncharacterized LOC100128893##NM_002894|RBBP8|5932|retinoblastoma binding protein 8##U72066|RBBP8|5932|retinoblastoma binding protein 8##AK292481|RBBP8|5932|retinoblastoma binding protein 8##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	0.999541	CTCF.p2:1:1.000
chr6	41747743	41747857	reg1004419.p1	13.436	+	TSC_hg19_v1_chr6_-_41747644 NM_006653	-111	-	J04443 BC042578 BC073740 U75272 TSC_hg19_v1_chr6_-_41715136 AK223274 AK301298 AK301325 NM_001166424 NM_002630	-32683	-	TSC_hg19_v1_chr6_-_41703962 AK298390 AJ608786 NM_001167827	-43828	-	AL137721 NM_013397 TSC_hg19_v1_chr6_+_41748522 BC027896 AK057184	785	+	TSC_hg19_v1_chr6_+_41754422 AJ420506	6649	+	NM_001134493	7380	+	NM_006653|FRS3|10817|fibroblast growth factor receptor substrate 3##J04443|PGC|5225|progastricsin (pepsinogen C)##BC042578|PGC|5225|progastricsin (pepsinogen C)##BC073740|PGC|5225|progastricsin (pepsinogen C)##U75272|PGC|5225|progastricsin (pepsinogen C)##AK223274|PGC|5225|progastricsin (pepsinogen C)##AK301298|PGC|5225|progastricsin (pepsinogen C)##AK301325|PGC|5225|progastricsin (pepsinogen C)##NM_001166424|PGC|5225|progastricsin (pepsinogen C)##NM_002630|PGC|5225|progastricsin (pepsinogen C)##AK298390|TFEB|7942|transcription factor EB##AJ608786|TFEB|7942|transcription factor EB##NM_001167827|TFEB|7942|transcription factor EB##NM_013397|PRICKLE4|29964|prickle homolog 4 (Drosophila)##AJ420506|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##NM_001134493|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)	0.906279	CTCF.p2:-4:0.906
chr12	103342767	103342908	reg1005032.p1	13.435	+	L47726 NM_000277 U49897	-31457	-	TSC_hg19_v1_chr12_-_103311062 BC026251	-31774	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	-31871	-	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	8684	+	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	9255	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	546909	-	L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42	0.77075	CTCF.p2:-26:0.771
chr12	53937363	53937485	reg1003774.p1	13.435	+	BC104234 BC104235 AF005271 NM_003717	-36028	-	NM_134324	-42048	+	TSC_hg19_v1_chr12_+_53895135 AK309569 U08998 AK290737 AK293728 AB464283 BT007140 DQ893549 DQ893931	-42296	+	AB463398 X57197 NM_001130059	57369	-	TSC_hg19_v1_chr12_-_54019764 BC042363 NM_001206683	82311	-	TSC_hg19_v1_chr12_-_54020167 BC136302 X52943 AK298853 AK313507 BC032433 BC140006 NM_001130060 NM_001206682 NM_006856	82729	-	BC104234|NPFF|8620|neuropeptide FF-amide peptide precursor##BC104235|NPFF|8620|neuropeptide FF-amide peptide precursor##AF005271|NPFF|8620|neuropeptide FF-amide peptide precursor##NM_003717|NPFF|8620|neuropeptide FF-amide peptide precursor##NM_134324|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##AK309569|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##U08998|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##AK290737|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##BT007140|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##DQ893549|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##DQ893931|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##X57197|ATF7|11016|activating transcription factor 7##NM_001130059|ATF7|11016|activating transcription factor 7##BC042363|ATF7|11016|activating transcription factor 7##NM_001206683|ATF7|11016|activating transcription factor 7##BC136302|ATF7|11016|activating transcription factor 7##X52943|ATF7|11016|activating transcription factor 7##AK298853|ATF7|11016|activating transcription factor 7##AK313507|ATF7|11016|activating transcription factor 7##BC032433|ATF7|11016|activating transcription factor 7##BC140006|ATF7|11016|activating transcription factor 7##NM_001130060|ATF7|11016|activating transcription factor 7##NM_001206682|ATF7|11016|activating transcription factor 7##NM_006856|ATF7|11016|activating transcription factor 7	1.371712	CTCF.p2:-17:0.463	CTCF.p2:17:0.909
chr16	29711938	29712072	reg1005578.p1	13.435	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-21523	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-21611	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-36991	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	45296	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	77581	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	90046	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.99995	CTCF.p2:-24:1.000
chr20	37554724	37554852	reg1003957.p1	13.435	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	-120434	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	-177676	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-201629	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	201	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	280	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	36201	+	AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35	0.967936	CTCF.p2:-7:0.968
chr12	7074362	7074480	reg1003880.p2	13.434	+	TSC_hg19_v1_chr12_+_7060554 AK309037 M74903 AF178946	-13819	+	TSC_hg19_v1_chr12_+_7060550 AK290421	-13873	+	AK223629 TSC_hg19_v1_chr12_+_7060538	-13883	+	TSC_hg19_v1_chr12_-_7079814 AB528395 DQ891808 EU176626 BC014766 BC013228 AF178980 AF150962	5300	-	TSC_hg19_v1_chr12_-_7079828 AK298217 AK301316 AF126021 NM_007273 BC110322 NM_001144831	5454	-	NM_006331 BC055314 TSC_hg19_v1_chr12_+_7080072 AK298207	5588	+	M74903|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AF178946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK290421|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK223629|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ891808|PHB2|11331|prohibitin 2##EU176626|PHB2|11331|prohibitin 2##BC014766|PHB2|11331|prohibitin 2##BC013228|PHB2|11331|prohibitin 2##AF178980|PHB2|11331|prohibitin 2##AF150962|PHB2|11331|prohibitin 2##AK298217|PHB2|11331|prohibitin 2##AK301316|PHB2|11331|prohibitin 2##AF126021|PHB2|11331|prohibitin 2##NM_007273|PHB2|11331|prohibitin 2##BC110322|PHB2|11331|prohibitin 2##NM_001144831|PHB2|11331|prohibitin 2##NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	0.998445	CTCF.p2:-1:0.998
chr2	30146119	30146233	reg1005342.p1	13.434	+	EU788003 EU788004 EU788005 EU788006 EU788007 EU788008 EU788009 EU788010 FJ838786 FJ838787 U62540 TSC_hg19_v1_chr2_-_30144453 AK296218 NM_004304	-1722	-	TSC_hg19_v1_chr2_+_29338370 BC013862 NM_024692 AL834443	-807821	+	NM_001029883	-849050	-	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	223594	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	223657	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	223700	+	EU788003|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788004|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788005|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788006|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788007|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788008|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788009|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788010|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838786|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838787|ALK|238|anaplastic lymphoma receptor tyrosine kinase##U62540|ALK|238|anaplastic lymphoma receptor tyrosine kinase##AK296218|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_004304|ALK|238|anaplastic lymphoma receptor tyrosine kinase##BC013862|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_024692|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##AL834443|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)	0.995998	CTCF.p2:1:0.996
chr2	17827475	17827601	reg1004872.p1	13.433	+	TSC_hg19_v1_chr2_+_17721989 AF039555 U14747 AB001104	-105518	+	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	-105651	+	DQ860102 NM_001099218	-127833	-	TSC_hg19_v1_chr2_-_17935047 BC032675	107490	-	TSC_hg19_v1_chr2_-_17935077 AL832979 AL136544	107528	-	BC039828 TSC_hg19_v1_chr2_-_17935086 NM_001142286 NM_024624	107557	-	AF039555|VSNL1|7447|visinin-like 1##U14747|VSNL1|7447|visinin-like 1##AB001104|VSNL1|7447|visinin-like 1##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##BC032675|SMC6|79677|structural maintenance of chromosomes 6##AL832979|SMC6|79677|structural maintenance of chromosomes 6##AL136544|SMC6|79677|structural maintenance of chromosomes 6##BC039828|SMC6|79677|structural maintenance of chromosomes 6##NM_001142286|SMC6|79677|structural maintenance of chromosomes 6##NM_024624|SMC6|79677|structural maintenance of chromosomes 6	0.973065	CTCF.p2:-14:0.973
chr3	123735513	123735652	reg1006325.p1	13.433	+	AF303889 NM_017578	-25384	-	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	-55327	-	TSC_hg19_v1_chr3_-_123680077 AK123060 AK307847 AK294979 BC040285	-55496	-	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	78023	+	TSC_hg19_v1_chr3_+_124103674 AK131379	368041	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	567946	+	AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14##AK123060|CCDC14|64770|coiled-coil domain containing 14##AK307847|CCDC14|64770|coiled-coil domain containing 14##AK294979|CCDC14|64770|coiled-coil domain containing 14##BC040285|CCDC14|64770|coiled-coil domain containing 14##AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AK131379|KALRN|8997|kalirin, RhoGEF kinase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase	0.809313	CTCF.p2:-11:0.809
chr4	8609473	8609607	reg1004055.p2	13.431	+	U83411 TSC_hg19_v1_chr4_+_8594521	-15017	+	AK056317 NM_001014447 NM_001014448 NM_003652 BC080539 BC006393 BC018913 TSC_hg19_v1_chr4_+_8594489	-15101	+	AK128807 NM_080819 BC057778 AY359107	-27225	+	AB593128 M99587 NM_018942	263957	-	NM_001040071	341936	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	607589	+	U83411|CPZ|8532|carboxypeptidase Z##AK056317|CPZ|8532|carboxypeptidase Z##NM_001014447|CPZ|8532|carboxypeptidase Z##NM_001014448|CPZ|8532|carboxypeptidase Z##NM_003652|CPZ|8532|carboxypeptidase Z##BC080539|CPZ|8532|carboxypeptidase Z##BC006393|CPZ|8532|carboxypeptidase Z##BC018913|CPZ|8532|carboxypeptidase Z##AK128807|GPR78|27201|G protein-coupled receptor 78##NM_080819|GPR78|27201|G protein-coupled receptor 78##BC057778|GPR78|27201|G protein-coupled receptor 78##AY359107|GPR78|27201|G protein-coupled receptor 78##M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##NM_001040071|LOC650293|650293|seven transmembrane helix receptor##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.98597	CTCF.p2:-13:0.986
chr11	59197526	59197638	reg1003129.p2	13.429	+	NM_001001954 BC136991	-7146	-	BC140917 NM_001004729	-65675	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	-217175	-	BC137060 BC137061 NM_001004728	13046	+	BC137028 BC137029 NM_001004708	26839	+	BC136893 BC136894 NM_001004705	47291	+	NM_001001954|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC136991|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1##BC137060|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1##BC137061|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1##NM_001004728|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1##BC137028|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6##BC137029|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6##NM_001004708|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6##BC136893|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##BC136894|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##NM_001004705|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10	0.999562	CTCF.p2:7:1.000
chr12	50030816	50030949	reg1004369.p1	13.429	+	BC067364 NM_001031698	-6556	+	TSC_hg19_v1_chr12_+_50017344 AK123353 BC050398 AL834216 NM_012272	-13511	+	AM393365 AL136748 BC035621 AK302702 AK093242 AX748009 NM_032130	-31537	-	AB384661 TSC_hg19_v1_chr12_-_50101046	70128	-	TSC_hg19_v1_chr12_-_50101189 AK128195	70276	-	TSC_hg19_v1_chr12_-_50101206 AB095934 BC159100 NM_175736 NM_198900	70330	-	BC067364|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_001031698|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AK123353|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##BC050398|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AL834216|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_012272|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AM393365|FAM186B|84070|family with sequence similarity 186, member B##AL136748|FAM186B|84070|family with sequence similarity 186, member B##BC035621|FAM186B|84070|family with sequence similarity 186, member B##AK302702|FAM186B|84070|family with sequence similarity 186, member B##AK093242|FAM186B|84070|family with sequence similarity 186, member B##NM_032130|FAM186B|84070|family with sequence similarity 186, member B##AK128195|FMNL3|91010|formin-like 3##AB095934|FMNL3|91010|formin-like 3##BC159100|FMNL3|91010|formin-like 3##NM_175736|FMNL3|91010|formin-like 3##NM_198900|FMNL3|91010|formin-like 3	0.679834	CTCF.p2:-18:0.680
chr1	45825596	45825725	reg1003428.p1	13.429	+	TSC_hg19_v1_chr1_+_45805883 AK298162 AK093320 BC009364 CU679325 CR457320	-19760	+	AB032924 AB032925 AB032926 AB025227 NM_001048174 AB032927 AB032928 AB032929 NM_001048172 NM_001048173 CU678424 AB590565 AB032920 AB032921 AB032922 AB032923 BC003178 AK293830 NM_001048171 NM_001128425 NM_012222	-19787	-	TSC_hg19_v1_chr1_+_45805845 AK024011	-19831	+	TSC_hg19_v1_chr1_-_45956836 BX648441 AK027573 AK294172 BC022194 AB057597 AJ132545 AK299269 NM_007170 AK302494	131173	-	AK098537 NM_015506 TSC_hg19_v1_chr1_+_45965990 AL080062 BC006122	140279	+	X67951 L19184 TSC_hg19_v1_chr1_-_45987557 AK311898 BC007063 AK131049 BC021683 NM_002574 NM_181696 NM_181697	161918	-	AK298162|TOE1|114034|target of EGR1, member 1 (nuclear)##AK093320|TOE1|114034|target of EGR1, member 1 (nuclear)##BC009364|TOE1|114034|target of EGR1, member 1 (nuclear)##CR457320|TOE1|114034|target of EGR1, member 1 (nuclear)##AB032924|MUTYH|4595|mutY homolog (E. coli)##AB032925|MUTYH|4595|mutY homolog (E. coli)##AB032926|MUTYH|4595|mutY homolog (E. coli)##AB025227|MUTYH|4595|mutY homolog (E. coli)##NM_001048174|MUTYH|4595|mutY homolog (E. coli)##AB032927|MUTYH|4595|mutY homolog (E. coli)##AB032928|MUTYH|4595|mutY homolog (E. coli)##AB032929|MUTYH|4595|mutY homolog (E. coli)##NM_001048172|MUTYH|4595|mutY homolog (E. coli)##NM_001048173|MUTYH|4595|mutY homolog (E. coli)##AB032920|MUTYH|4595|mutY homolog (E. coli)##AB032921|MUTYH|4595|mutY homolog (E. coli)##AB032922|MUTYH|4595|mutY homolog (E. coli)##AB032923|MUTYH|4595|mutY homolog (E. coli)##BC003178|MUTYH|4595|mutY homolog (E. coli)##AK293830|MUTYH|4595|mutY homolog (E. coli)##NM_001048171|MUTYH|4595|mutY homolog (E. coli)##NM_001128425|MUTYH|4595|mutY homolog (E. coli)##NM_012222|MUTYH|4595|mutY homolog (E. coli)##AK024011|TOE1|114034|target of EGR1, member 1 (nuclear)##BX648441|TESK2|10420|testis-specific kinase 2##AK027573|TESK2|10420|testis-specific kinase 2##AK294172|TESK2|10420|testis-specific kinase 2##BC022194|TESK2|10420|testis-specific kinase 2##AB057597|TESK2|10420|testis-specific kinase 2##AJ132545|TESK2|10420|testis-specific kinase 2##AK299269|TESK2|10420|testis-specific kinase 2##NM_007170|TESK2|10420|testis-specific kinase 2##AK302494|TESK2|10420|testis-specific kinase 2##AK098537|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##NM_015506|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##AL080062|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BC006122|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##X67951|PRDX1|5052|peroxiredoxin 1##L19184|PRDX1|5052|peroxiredoxin 1##AK311898|PRDX1|5052|peroxiredoxin 1##BC007063|PRDX1|5052|peroxiredoxin 1##AK131049|PRDX1|5052|peroxiredoxin 1##BC021683|PRDX1|5052|peroxiredoxin 1##NM_002574|PRDX1|5052|peroxiredoxin 1##NM_181696|PRDX1|5052|peroxiredoxin 1##NM_181697|PRDX1|5052|peroxiredoxin 1	0.882937	CTCF.p2:-19:0.883
chr17	38269498	38269610	reg1004019.p2	13.429	+	TSC_hg19_v1_chr17_-_38256983 M24898 NM_021724	-12580	-	M34339 X72631 TSC_hg19_v1_chr17_-_38256833 BC047875 AK315270 AK300155 BC056148	-12832	-	TSC_hg19_v1_chr17_-_38252967 AY429554	-16573	-	CR749360 TSC_hg19_v1_chr17_+_38278225	8668	+	NM_001012241 BC118997 BC122543	9273	+	EU831932 EU832027 TSC_hg19_v1_chr17_+_38279490	9925	+	M24898|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##NM_021724|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AY429554|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##CR749360|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##NM_001012241|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##BC118997|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##BC122543|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##EU831932|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##EU832027|MSL1|339287|male-specific lethal 1 homolog (Drosophila)	0.441539	CTCF.p2:-14:0.442
chr2	73086999	73087129	reg1004778.p1	13.429	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	-33960	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	-712122	-	AK295683 TSC_hg19_v1_chr2_-_72371202	-715865	-	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	27466	+	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	57589	+	TSC_hg19_v1_chr2_-_73298414 AK024193	211372	-	AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1##AK024193|SFXN5|94097|sideroflexin 5	0.998583	CTCF.p2:9:0.999
chr3	193290285	193290408	reg1005807.p1	13.429	+	AY823162 BC101496 AK095277 NM_032279	-17705	-	AY823163 NM_198505 AK122613	-193774	-	TSC_hg19_v1_chr3_+_192959112 AB030816	-331236	+	TSC_hg19_v1_chr3_+_193310928 NM_015560 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837	20609	+	TSC_hg19_v1_chr3_+_193311006 BC043443 BC075805 AB011139	20721	+	TSC_hg19_v1_chr3_+_193311166 AB385350	20819	+	AY823162|ATP13A4|84239|ATPase type 13A4##BC101496|ATP13A4|84239|ATPase type 13A4##AK095277|ATP13A4|84239|ATPase type 13A4##NM_032279|ATP13A4|84239|ATPase type 13A4##AY823163|ATP13A5|344905|ATPase type 13A5##NM_198505|ATP13A5|344905|ATPase type 13A5##AK122613|ATP13A5|344905|ATPase type 13A5##AB030816|HRASLS|57110|HRAS-like suppressor##NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)##BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)##BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)##AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)	0.891463	CTCF.p2:12:0.891
chr1	173171618	173171745	reg1004196.p1	13.427	+	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	-151625	-	D38122 AK314874 NM_000639 X89102 BC017502 U08137 AF288573 U11821 AB528416 DQ893466 DQ896147 CU675998 AY225406 AY858799	-543432	+	TSC_hg19_v1_chr1_+_172502291 NM_016227 AK302509 AL035291 BC137125 BC144487	-669300	+	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	2972	-	CR542033 D90224 X79929 NM_003326	4711	-	TSC_hg19_v1_chr1_-_173446300 AK127238	274627	-	AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##D38122|FASLG|356|Fas ligand (TNF superfamily, member 6)##AK314874|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_000639|FASLG|356|Fas ligand (TNF superfamily, member 6)##X89102|FASLG|356|Fas ligand (TNF superfamily, member 6)##BC017502|FASLG|356|Fas ligand (TNF superfamily, member 6)##U08137|FASLG|356|Fas ligand (TNF superfamily, member 6)##AF288573|FASLG|356|Fas ligand (TNF superfamily, member 6)##U11821|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ893466|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ896147|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY225406|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY858799|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_016227|C1orf9|51430|chromosome 1 open reading frame 9##AK302509|C1orf9|51430|chromosome 1 open reading frame 9##AL035291|C1orf9|51430|chromosome 1 open reading frame 9##BC137125|C1orf9|51430|chromosome 1 open reading frame 9##BC144487|C1orf9|51430|chromosome 1 open reading frame 9##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AK127238|LOC100506023|100506023|uncharacterized LOC100506023	0.724517	CTCF.p2:15:0.725
chr19	2611289	2611404	reg1003485.p2	13.427	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-135108	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-154386	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-154410	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	91349	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	91396	-	AK124445 TSC_hg19_v1_chr19_-_2717420	106003	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.999894	CTCF.p2:21:1.000
chr5	55232069	55232193	reg1004131.p1	13.427	+	NM_001242636 NM_001242639	-82982	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-84862	+	NM_001166534 AK093439 AX748127	-169406	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	58632	-	AK123389 NM_024669	297054	-	NM_005921	878768	+	NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##NM_001166534|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##AK093439|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	1.082388	CTCF.p2:-6:0.987
chr18	29399710	29399830	reg1005528.p1	13.425	+	BC103999 BC104000 BC104001 AK302337 NM_001034172	-59000	-	AB024742 BC074835 BC074884 BC069620 BC069642 AF069054 AK314860 AF097159 NM_004775	-135231	-	NM_000371 TSC_hg19_v1_chr18_+_29171839 AK312051 BC005310 BC020791 D00096 GU727633 K02091 M10605 X59498 AF162690 BT007189 CR456908 DQ778081 DQ839490 U19780	-227973	+	BC127109 BC127110 TSC_hg19_v1_chr18_-_29523061	123254	-	TSC_hg19_v1_chr18_-_29523064 BC059380 AK292537	123297	-	TSC_hg19_v1_chr18_-_29523092 NM_014939 AL136749	123338	-	BC103999|MCART2|147407|mitochondrial carrier triple repeat 2##BC104000|MCART2|147407|mitochondrial carrier triple repeat 2##BC104001|MCART2|147407|mitochondrial carrier triple repeat 2##AK302337|MCART2|147407|mitochondrial carrier triple repeat 2##NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2##AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##NM_000371|TTR|7276|transthyretin##AK312051|TTR|7276|transthyretin##BC005310|TTR|7276|transthyretin##BC020791|TTR|7276|transthyretin##D00096|TTR|7276|transthyretin##GU727633|TTR|7276|transthyretin##K02091|TTR|7276|transthyretin##M10605|TTR|7276|transthyretin##X59498|TTR|7276|transthyretin##AF162690|TTR|7276|transthyretin##BT007189|TTR|7276|transthyretin##CR456908|TTR|7276|transthyretin##DQ839490|TTR|7276|transthyretin##U19780|TTR|7276|transthyretin##BC127109|TRAPPC8|22878|trafficking protein particle complex 8##BC127110|TRAPPC8|22878|trafficking protein particle complex 8##BC059380|TRAPPC8|22878|trafficking protein particle complex 8##AK292537|TRAPPC8|22878|trafficking protein particle complex 8##NM_014939|TRAPPC8|22878|trafficking protein particle complex 8##AL136749|TRAPPC8|22878|trafficking protein particle complex 8	0.999508	CTCF.p2:10:1.000
chr21	39542454	39542568	reg1004962.p1	13.424	+	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	-49110	-	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	-253800	-	NM_130438 NM_001396 U52373 D85759 U58496	-749891	+	BC013327 NM_002243	86152	+	D87291 NM_170736 AK292812	86418	+	NM_170737	101917	+	HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170737|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.02047	
chr12	14017142	14017266	reg1005597.p1	13.423	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-667475	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-667487	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-667566	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	115782	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	501431	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	521068	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.872978	CTCF.p2:3:0.873
chr20	42378518	42378644	reg1003920.p2	13.423	+	BC040049 AK058060 NM_001008901 NM_176791	-22978	-	TSC_hg19_v1_chr20_+_42295753 AK303249 AK314791 BC053555 X13293 AB528519 AK223482 DQ893522 DQ895945	-82746	+	NM_002466 TSC_hg19_v1_chr20_+_42295720 BC007585	-82860	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	164906	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	166212	+	NM_001098798	195954	+	BC040049|GTSF1L|149699|gametocyte specific factor 1-like##AK058060|GTSF1L|149699|gametocyte specific factor 1-like##NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like##NM_176791|GTSF1L|149699|gametocyte specific factor 1-like##AK303249|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK314791|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC053555|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##X13293|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK223482|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ893522|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ895945|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_002466|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC007585|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098798|TOX2|84969|TOX high mobility group box family member 2	0.999379	CTCF.p2:-13:0.999
chr7	90663905	90664035	reg1004914.p1	13.423	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	-324810	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	-325187	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	-438161	+	BC017719 TSC_hg19_v1_chr7_+_90893724	229731	+	TSC_hg19_v1_chr7_+_90893747 AB017363 NM_003505 AF072872 BC051271 AK314996	229906	+	TSC_hg19_v1_chr7_-_91509979 BC108648 AL832861 AK298469 AK313641 NM_006980 Y09615 AK222730 AK311568	846045	-	AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##BC017719|FZD1|8321|frizzled family receptor 1##AB017363|FZD1|8321|frizzled family receptor 1##NM_003505|FZD1|8321|frizzled family receptor 1##AF072872|FZD1|8321|frizzled family receptor 1##BC051271|FZD1|8321|frizzled family receptor 1##AK314996|FZD1|8321|frizzled family receptor 1##BC108648|MTERF|7978|mitochondrial transcription termination factor##AL832861|MTERF|7978|mitochondrial transcription termination factor##AK298469|MTERF|7978|mitochondrial transcription termination factor##AK313641|MTERF|7978|mitochondrial transcription termination factor##NM_006980|MTERF|7978|mitochondrial transcription termination factor##Y09615|MTERF|7978|mitochondrial transcription termination factor##AK222730|MTERF|7978|mitochondrial transcription termination factor	0.778248	CTCF.p2:16:0.778
chr10	125755448	125755582	reg1000354.p3	13.422	+	BC137492 BC146862 AY358565 NM_198148	-104019	-	AJ505757 NM_153442 BC112011 BC113462	-329638	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-841159	+	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	96384	-	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	97638	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	351958	-	BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase	0.942506	CTCF.p2:18:0.943
chr1	208305649	208305778	reg1005589.p1	13.422	+	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-221156	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-221330	-	BX640941 TSC_hg19_v1_chr1_-_208059392	-246390	-	TSC_hg19_v1_chr1_-_208417635 NM_025179	111936	-	AK091113 AX746785 NM_001104548	1296452	+	NM_020439 AK095713 AK289675 AF428261 BC032787	1451347	+	BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_025179|PLXNA2|5362|plexin A2##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	0.211358	CTCF.p2:-2:0.211
chr17	76356964	76357082	reg1003635.p2	13.422	+	TSC_hg19_v1_chr17_-_76356159 AK309756 AK314212 BC060858 NM_003955	-866	-	BC042066 NM_001204210 NM_001204211 NM_001204212 BC148207	-129560	+	TSC_hg19_v1_chr17_+_76210353 AK223428 BC000784 BC034148 AY927772 BC002388 BC008718 HM625836 AB028869 AF077350 AK311917 BC065497 AB590059 AM393128 AB154416 AY830084 CR541740 DQ227257 DQ310375 DQ310376 DQ310377 DQ310378 DQ310379 DQ508249 DQ508245 DQ508246 DQ508247 DQ508248	-146626	+	TSC_hg19_v1_chr17_+_76374729 AK316147 AK307874 AK296882 AK024529 AK225030 AK316405 BC108732 NM_024419 BC035662 AK297156 BC008903 BC015570 BC025951	17707	+	NM_173628	216452	-	AK316277 TSC_hg19_v1_chr17_-_76719649	362624	-	AK309756|SOCS3|9021|suppressor of cytokine signaling 3##AK314212|SOCS3|9021|suppressor of cytokine signaling 3##BC060858|SOCS3|9021|suppressor of cytokine signaling 3##NM_003955|SOCS3|9021|suppressor of cytokine signaling 3##BC042066|TMEM235|283999|transmembrane protein 235##NM_001204210|TMEM235|283999|transmembrane protein 235##NM_001204211|TMEM235|283999|transmembrane protein 235##NM_001204212|TMEM235|283999|transmembrane protein 235##BC148207|TMEM235|283999|transmembrane protein 235##AK223428|BIRC5|332|baculoviral IAP repeat containing 5##BC000784|BIRC5|332|baculoviral IAP repeat containing 5##BC034148|BIRC5|332|baculoviral IAP repeat containing 5##AY927772|BIRC5|332|baculoviral IAP repeat containing 5##BC008718|BIRC5|332|baculoviral IAP repeat containing 5##HM625836|BIRC5|332|baculoviral IAP repeat containing 5##AB028869|BIRC5|332|baculoviral IAP repeat containing 5##AF077350|BIRC5|332|baculoviral IAP repeat containing 5##AK311917|BIRC5|332|baculoviral IAP repeat containing 5##BC065497|BIRC5|332|baculoviral IAP repeat containing 5##AM393128|BIRC5|332|baculoviral IAP repeat containing 5##AB154416|BIRC5|332|baculoviral IAP repeat containing 5##AY830084|BIRC5|332|baculoviral IAP repeat containing 5##CR541740|BIRC5|332|baculoviral IAP repeat containing 5##DQ227257|BIRC5|332|baculoviral IAP repeat containing 5##DQ310375|BIRC5|332|baculoviral IAP repeat containing 5##DQ310376|BIRC5|332|baculoviral IAP repeat containing 5##DQ310377|BIRC5|332|baculoviral IAP repeat containing 5##DQ310378|BIRC5|332|baculoviral IAP repeat containing 5##DQ310379|BIRC5|332|baculoviral IAP repeat containing 5##DQ508249|BIRC5|332|baculoviral IAP repeat containing 5##DQ508245|BIRC5|332|baculoviral IAP repeat containing 5##DQ508246|BIRC5|332|baculoviral IAP repeat containing 5##DQ508247|BIRC5|332|baculoviral IAP repeat containing 5##DQ508248|BIRC5|332|baculoviral IAP repeat containing 5##AK316147|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK307874|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK296882|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK024529|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK225030|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK316405|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC108732|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_024419|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC035662|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK297156|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC008903|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC015570|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC025951|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17##AK316277|CYTH1|9267|cytohesin 1	0.993374	CTCF.p2:9:0.993
chr8	102658632	102658757	reg1003327.p1	13.422	+	TSC_hg19_v1_chr8_+_102504840 AK023844 AK292853 BC069618 BC069633 BC069638 BC129822 BC129823	-153784	+	TSC_hg19_v1_chr8_+_102504667 NM_024915 AK296817 AK310221	-154029	+	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	-440740	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	144489	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	144506	-	NM_032041	144744	-	AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##NM_032041|NCALD|83988|neurocalcin delta	0.505096	CTCF.p2:-10:0.505
chr15	86397694	86397838	reg1004163.p1	13.420	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-59571	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-59669	-	AF127481 NM_144767	-177499	+	NM_152336	287475	+	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	2402200	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	2612862	-	NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46	0.996983	CTCF.p2:0:0.997
chr3	37000323	37000441	reg1004735.p1	13.420	+	TSC_hg19_v1_chr3_-_36986546 NM_014831	-13812	-	NM_033403	-219031	-	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	-578330	+	AB385383 CU687938 TSC_hg19_v1_chr3_-_37034574	34189	-	TSC_hg19_v1_chr3_-_37034623 BC064696 AF059751 BC012624 AB018309 AY178832 NM_014805	34319	-	NM_000249 TSC_hg19_v1_chr3_+_37034977	34527	+	NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1##NM_033403|DCLK3|85443|doublecortin-like kinase 3##AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain##BC064696|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AF059751|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##BC012624|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AB018309|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AY178832|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##NM_014805|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##NM_000249|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)	0.030911	
chr4	184761517	184761643	reg1004705.p1	13.420	+	TSC_hg19_v1_chr4_+_184580539 BC139745	-181069	+	NM_021942 NM_199053 TSC_hg19_v1_chr4_+_184580445 AL833571 AK096345 BX648499 BX647127 BX538044 BC040530 BC051724	-181131	+	CU688324 BC107432 TSC_hg19_v1_chr4_-_184580305 AK021702 AK293274 AK315515 BC017472 BC067752 NM_152682	-181338	-	TSC_hg19_v1_chr4_+_184826513 AB037813 BC146754 NM_020225	64926	+	TSC_hg19_v1_chr4_+_184827807 AK289840	66240	+	TSC_hg19_v1_chr4_+_184827885 AB384196	66331	+	BC139745|C4orf41|60684|chromosome 4 open reading frame 41##NM_021942|C4orf41|60684|chromosome 4 open reading frame 41##NM_199053|C4orf41|60684|chromosome 4 open reading frame 41##AL833571|C4orf41|60684|chromosome 4 open reading frame 41##AK096345|C4orf41|60684|chromosome 4 open reading frame 41##BX648499|C4orf41|60684|chromosome 4 open reading frame 41##BX647127|C4orf41|60684|chromosome 4 open reading frame 41##BX538044|C4orf41|60684|chromosome 4 open reading frame 41##BC040530|C4orf41|60684|chromosome 4 open reading frame 41##BC051724|C4orf41|60684|chromosome 4 open reading frame 41##BC107432|RWDD4|201965|RWD domain containing 4##AK021702|RWDD4|201965|RWD domain containing 4##AK293274|RWDD4|201965|RWD domain containing 4##AK315515|RWDD4|201965|RWD domain containing 4##BC017472|RWDD4|201965|RWD domain containing 4##BC067752|RWDD4|201965|RWD domain containing 4##NM_152682|RWDD4|201965|RWD domain containing 4##AB037813|STOX2|56977|storkhead box 2##BC146754|STOX2|56977|storkhead box 2##NM_020225|STOX2|56977|storkhead box 2##AK289840|STOX2|56977|storkhead box 2	0.997775	CTCF.p2:-5:0.998
chr15	96370174	96370291	reg1014521.p1	13.419	+	TSC_hg19_v1_chr15_-_95870310 BC040875	-499913	-	NM_001159644 BC025708 BC111024 AK002037	-1470923	+	NM_001159643 NM_018349 AY656717 BC131527	-1528771	+	BC106083 NM_001145155 FM208183	498929	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	503745	+	AK316086 NM_001145156	505561	+	BC040875|LOC400456|400456|uncharacterized LOC400456##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.221661	CTCF.p2:7:0.222
chr11	73000616	73000759	reg1004158.p2	13.418	+	BC009391 NM_004154 BC000571 AF218005 X97058 AK311529 U52464	-17348	+	AF007892 AX775903 NM_176798	-19749	+	NM_176796 NM_176797 AF007891	-25111	+	TSC_hg19_v1_chr11_+_73019337 AK074500	18717	+	BC137228 NM_014786 AF378754	18978	+	TSC_hg19_v1_chr11_-_73020422 AK300095	19736	-	BC009391|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_004154|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##BC000571|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF218005|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##X97058|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##U52464|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007892|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AX775903|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176798|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176796|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176797|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007891|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK300095|LOC100287837|100287837|uncharacterized LOC100287837	0.565728	CTCF.p2:10:0.566
chr1	36600425	36600553	reg1003778.p1	13.415	+	AK074129 BC096295 BC096296 BC096297 BC099645 NM_005202	-34640	-	NM_017825 AF212236 TSC_hg19_v1_chr1_+_36554492 AJ427295 AK000453 AK295283 BC014169 AK316349 AK223037 CR457237	-46011	+	TSC_hg19_v1_chr1_+_36549714 BC035620 AK313610	-50766	+	AJ224335 TSC_hg19_v1_chr1_-_36615058 AY007139	14547	-	BC007662 NM_014408 AF041432 TSC_hg19_v1_chr1_-_36615078 AK315610	14601	-	TSC_hg19_v1_chr1_+_36621723 AB033013	21113	+	AK074129|COL8A2|1296|collagen, type VIII, alpha 2##BC096295|COL8A2|1296|collagen, type VIII, alpha 2##BC096296|COL8A2|1296|collagen, type VIII, alpha 2##BC096297|COL8A2|1296|collagen, type VIII, alpha 2##BC099645|COL8A2|1296|collagen, type VIII, alpha 2##NM_005202|COL8A2|1296|collagen, type VIII, alpha 2##NM_017825|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AF212236|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AJ427295|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK000453|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK295283|ADPRHL2|54936|ADP-ribosylhydrolase like 2##BC014169|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK316349|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK223037|ADPRHL2|54936|ADP-ribosylhydrolase like 2##CR457237|ADPRHL2|54936|ADP-ribosylhydrolase like 2##BC035620|TEKT2|27285|tektin 2 (testicular)##AK313610|TEKT2|27285|tektin 2 (testicular)##AJ224335|TRAPPC3|27095|trafficking protein particle complex 3##AY007139|TRAPPC3|27095|trafficking protein particle complex 3##BC007662|TRAPPC3|27095|trafficking protein particle complex 3##NM_014408|TRAPPC3|27095|trafficking protein particle complex 3##AF041432|TRAPPC3|27095|trafficking protein particle complex 3##AK315610|TRAPPC3|27095|trafficking protein particle complex 3##AB033013|MAP7D1|55700|MAP7 domain containing 1	0.926573	CTCF.p2:20:0.927
chr14	90381729	90381854	reg1005178.p1	13.414	+	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	-296196	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	-498381	-	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-503015	-	BC001787 BX247991 AK298930 AK094740 NM_145231	39269	-	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	40455	+	TSC_hg19_v1_chr14_+_90422278 AK001952 BC015474 AK315549 BX161451	40488	+	AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK001952|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC015474|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK315549|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BX161451|TDP1|55775|tyrosyl-DNA phosphodiesterase 1	0.674709	CTCF.p2:11:0.675
chr2	100879451	100879579	reg1003845.p2	13.414	+	BC036895 TSC_hg19_v1_chr2_-_100759026 NM_002285	-120512	-	TSC_hg19_v1_chr2_-_100722359 AK297407 AK092327 AX747484	-157057	-	TSC_hg19_v1_chr2_-_100722267 AK308645	-157247	-	DQ020495 NM_198461	59679	-	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	154582	-	AB164464 NM_001011717	207428	+	BC036895|AFF3|3899|AF4/FMR2 family, member 3##NM_002285|AFF3|3899|AF4/FMR2 family, member 3##AK297407|AFF3|3899|AF4/FMR2 family, member 3##AK092327|AFF3|3899|AF4/FMR2 family, member 3##AK308645|AFF3|3899|AF4/FMR2 family, member 3##DQ020495|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##NM_198461|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S	0.999134	CTCF.p2:-8:0.999
chr11	33737889	33738030	reg1005487.p1	13.413	+	NM_001166692	-15674	-	TSC_hg19_v1_chr11_+_33563772 AK124395 NM_012194	-174135	+	TSC_hg19_v1_chr11_+_33363104 AK304063	-374815	+	AK309894 NM_001127223 NM_001127225 NM_001127226	6313	-	NM_001127227	6538	-	TSC_hg19_v1_chr11_-_33757970 M27909 AK311778 X16447 X17198 NM_000611 NM_203329 NM_203330 NM_203331	19989	-	NM_001166692|C11orf91|100131378|chromosome 11 open reading frame 91##AK124395|C11orf41|25758|chromosome 11 open reading frame 41##NM_012194|C11orf41|25758|chromosome 11 open reading frame 41##AK304063|HIPK3|10114|homeodomain interacting protein kinase 3##AK309894|CD59|966|CD59 molecule, complement regulatory protein##NM_001127223|CD59|966|CD59 molecule, complement regulatory protein##NM_001127225|CD59|966|CD59 molecule, complement regulatory protein##NM_001127226|CD59|966|CD59 molecule, complement regulatory protein##NM_001127227|CD59|966|CD59 molecule, complement regulatory protein##M27909|CD59|966|CD59 molecule, complement regulatory protein##AK311778|CD59|966|CD59 molecule, complement regulatory protein##X16447|CD59|966|CD59 molecule, complement regulatory protein##X17198|CD59|966|CD59 molecule, complement regulatory protein##NM_000611|CD59|966|CD59 molecule, complement regulatory protein##NM_203329|CD59|966|CD59 molecule, complement regulatory protein##NM_203330|CD59|966|CD59 molecule, complement regulatory protein##NM_203331|CD59|966|CD59 molecule, complement regulatory protein	0.213929	CTCF.p2:-12:0.214
chr7	155137700	155137830	reg1004289.p2	13.413	+	AK291675 TSC_hg19_v1_chr7_+_155089667	-48121	+	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	-48243	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	-275188	+	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	112999	+	BC105732 BC105733 BC105734 BC107598 NM_001103176 AK094445	188782	-	TSC_hg19_v1_chr7_-_155437101 AK091942 AX747269	299325	-	AK291675|INSIG1|3638|insulin induced gene 1##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2##BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)##BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)##NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)##AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)	0.999194	CTCF.p2:-9:0.999
chr14	23455903	23456031	reg1005356.p1	13.411	+	TSC_hg19_v1_chr14_-_23451806 BC034968 NM_032876	-4192	-	AK096128 NM_198086	-9536	-	AK025567 TSC_hg19_v1_chr14_-_23445979	-10032	-	BC014299 BX161507 BX161383 BX161417 AK023026 AK022216 NM_001130706 NM_001130708 NM_021944	23376	-	BT006777 S74378 D29011 BC004146 BX248299 AB528985 CU691272 TSC_hg19_v1_chr14_-_23504095 AK300714 BX538001 BC107720 BC057840 AK311895 AK225888	48055	-	NM_001144932 NM_002797 NM_001130725	48423	-	BC034968|AJUBA|84962|ajuba LIM protein##NM_032876|AJUBA|84962|ajuba LIM protein##AK096128|AJUBA|84962|ajuba LIM protein##NM_198086|AJUBA|84962|ajuba LIM protein##AK025567|AJUBA|84962|ajuba LIM protein##BC014299|C14orf93|60686|chromosome 14 open reading frame 93##BX161507|C14orf93|60686|chromosome 14 open reading frame 93##BX161383|C14orf93|60686|chromosome 14 open reading frame 93##BX161417|C14orf93|60686|chromosome 14 open reading frame 93##AK023026|C14orf93|60686|chromosome 14 open reading frame 93##AK022216|C14orf93|60686|chromosome 14 open reading frame 93##NM_001130706|C14orf93|60686|chromosome 14 open reading frame 93##NM_001130708|C14orf93|60686|chromosome 14 open reading frame 93##NM_021944|C14orf93|60686|chromosome 14 open reading frame 93##BT006777|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##S74378|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BX248299|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK300714|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BX538001|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BC107720|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BC057840|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK311895|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK225888|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_001144932|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_002797|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_001130725|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5	0.9996	CTCF.p2:-7:1.000
chr10	46504175	46504307	reg1006190.p1	13.410	+	BC171820 BC171833 AF411132 NM_133446	-161328	-	NM_001169106 NM_001169107 NM_015262 TSC_hg19_v1_chr10_+_46222703 AK291430 AB011164 BC150611 AK303048 AK293929 BC053887	-281534	+	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	-336027	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	115755	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	136447	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	136780	-	BC171833|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##AF411132|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##NM_133446|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##NM_001169106|FAM21C|253725|family with sequence similarity 21, member C##NM_001169107|FAM21C|253725|family with sequence similarity 21, member C##NM_015262|FAM21C|253725|family with sequence similarity 21, member C##AK291430|FAM21C|253725|family with sequence similarity 21, member C##AB011164|FAM21C|253725|family with sequence similarity 21, member C##BC150611|FAM21C|253725|family with sequence similarity 21, member C##AK303048|FAM21C|253725|family with sequence similarity 21, member C##AK293929|FAM21C|253725|family with sequence similarity 21, member C##BC053887|FAM21C|253725|family with sequence similarity 21, member C##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	0.999906	CTCF.p2:6:1.000
chr6	154475664	154475796	reg1003930.p1	13.410	+	EU360599 EU362990 NM_001145287	-68089	+	L29301 NM_000914 NM_001008503 NM_001008504 NM_001008505 NM_001145282 NM_001145283 NM_001145284 NM_001145285 NM_001145286 L25119 U12569 AB590577 AK309655 AK313901 AY225404 AY364230 AY036622 AY036623 AY309001 AY309005 AY309006 AY309007 AY309008 AY309009 BC074927 AY521028	-115170	+	DQ680044 NM_001145279 NM_001145280 EU340241 EU340242 EU340243 NM_001145281	-144098	+	BX647254 NM_001130699	175484	-	AK289917 AJ310566 NM_001130700 NM_015553 TSC_hg19_v1_chr6_-_154677938	202185	-	TSC_hg19_v1_chr6_-_154831690 BC060761	355941	-	EU360599|OPRM1|4988|opioid receptor, mu 1##EU362990|OPRM1|4988|opioid receptor, mu 1##NM_001145287|OPRM1|4988|opioid receptor, mu 1##L29301|OPRM1|4988|opioid receptor, mu 1##NM_000914|OPRM1|4988|opioid receptor, mu 1##NM_001008503|OPRM1|4988|opioid receptor, mu 1##NM_001008504|OPRM1|4988|opioid receptor, mu 1##NM_001008505|OPRM1|4988|opioid receptor, mu 1##NM_001145282|OPRM1|4988|opioid receptor, mu 1##NM_001145283|OPRM1|4988|opioid receptor, mu 1##NM_001145284|OPRM1|4988|opioid receptor, mu 1##NM_001145285|OPRM1|4988|opioid receptor, mu 1##NM_001145286|OPRM1|4988|opioid receptor, mu 1##L25119|OPRM1|4988|opioid receptor, mu 1##U12569|OPRM1|4988|opioid receptor, mu 1##AK313901|OPRM1|4988|opioid receptor, mu 1##AY225404|OPRM1|4988|opioid receptor, mu 1##AY364230|OPRM1|4988|opioid receptor, mu 1##AY036622|OPRM1|4988|opioid receptor, mu 1##AY036623|OPRM1|4988|opioid receptor, mu 1##AY309001|OPRM1|4988|opioid receptor, mu 1##AY309005|OPRM1|4988|opioid receptor, mu 1##AY309006|OPRM1|4988|opioid receptor, mu 1##AY309007|OPRM1|4988|opioid receptor, mu 1##AY309008|OPRM1|4988|opioid receptor, mu 1##AY309009|OPRM1|4988|opioid receptor, mu 1##BC074927|OPRM1|4988|opioid receptor, mu 1##AY521028|OPRM1|4988|opioid receptor, mu 1##DQ680044|OPRM1|4988|opioid receptor, mu 1##NM_001145279|OPRM1|4988|opioid receptor, mu 1##NM_001145280|OPRM1|4988|opioid receptor, mu 1##EU340241|OPRM1|4988|opioid receptor, mu 1##EU340242|OPRM1|4988|opioid receptor, mu 1##EU340243|OPRM1|4988|opioid receptor, mu 1##NM_001145281|OPRM1|4988|opioid receptor, mu 1##BX647254|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130699|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##AK289917|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##AJ310566|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130700|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_015553|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##BC060761|CNKSR3|154043|CNKSR family member 3	0.999851	CTCF.p2:-27:1.000
chr11	57294716	57294866	reg1005359.p1	13.409	+	TSC_hg19_v1_chr11_-_57283184 AB103033 NM_003627	-11619	-	AF045584 TSC_hg19_v1_chr11_-_57282334 BC001639 NM_001198810	-12455	-	TSC_hg19_v1_chr11_+_57228149 BC113673 BC117276 BC143818 AF532858 AX751514 AY250221 DQ864979 NM_178570	-66559	+	AK289751 BC032133 TSC_hg19_v1_chr11_-_57298210 AF150089 NM_012456	3414	-	NM_001105565	15322	+	AF031141 CR457126 CU689396 DQ891291 DQ894475 TSC_hg19_v1_chr11_-_57335144 AK315755 AK129621 AF061736 BC032491 NM_004223	40339	-	AB103033|SLC43A1|8501|solute carrier family 43, member 1##NM_003627|SLC43A1|8501|solute carrier family 43, member 1##AF045584|SLC43A1|8501|solute carrier family 43, member 1##BC001639|SLC43A1|8501|solute carrier family 43, member 1##NM_001198810|SLC43A1|8501|solute carrier family 43, member 1##BC113673|RTN4RL2|349667|reticulon 4 receptor-like 2##BC117276|RTN4RL2|349667|reticulon 4 receptor-like 2##BC143818|RTN4RL2|349667|reticulon 4 receptor-like 2##AF532858|RTN4RL2|349667|reticulon 4 receptor-like 2##AX751514|RTN4RL2|349667|reticulon 4 receptor-like 2##AY250221|RTN4RL2|349667|reticulon 4 receptor-like 2##DQ864979|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_178570|RTN4RL2|349667|reticulon 4 receptor-like 2##AK289751|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##BC032133|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##AF150089|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##NM_012456|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##NM_001105565|SMTNL1|219537|smoothelin-like 1##AF031141|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##CR457126|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##DQ891291|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##DQ894475|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##AK315755|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##AK129621|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##AF061736|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##BC032491|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##NM_004223|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6	0.856886	CTCF.p2:24:0.857
chr6	134495211	134495342	reg1005448.p1	13.409	+	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	-121573	-	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	-220931	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	-221912	+	CU674630 Y10032 AF153609 BC001263 FM205710 TSC_hg19_v1_chr6_-_134496003 AK098509 AK295422 BX649005	698	-	TSC_hg19_v1_chr6_-_134496010 NM_005627	743	-	FM205707 TSC_hg19_v1_chr6_-_134496850	1585	-	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1##Y10032|SGK1|6446|serum/glucocorticoid regulated kinase 1##AF153609|SGK1|6446|serum/glucocorticoid regulated kinase 1##BC001263|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205710|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK098509|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK295422|SGK1|6446|serum/glucocorticoid regulated kinase 1##BX649005|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_005627|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205707|SGK1|6446|serum/glucocorticoid regulated kinase 1	0.998485	CTCF.p2:-13:0.998
chr11	67085128	67085271	reg1003007.p1	13.408	+	TSC_hg19_v1_chr11_+_67071027 AK074432 AK001790 AK094226 BC007709 AB527672 AB072360 AB099291	-14158	+	NM_017857 TSC_hg19_v1_chr11_+_67070955 AK000522	-14258	+	TSC_hg19_v1_chr11_+_67056815 AK124721 AK096277 AK126438	-28356	+	AK096155 TSC_hg19_v1_chr11_+_67085309	115	+	AF179890 BC001334 TSC_hg19_v1_chr11_-_67121006 BC070250 AB209274 NM_021173	35805	-	DQ891525 DQ894715 AB528390 AY049779 BC066229 BC066230 BC066231 AF172854 BC012939 AF176911 NM_013246	55907	-	AK074432|SSH3|54961|slingshot homolog 3 (Drosophila)##AK001790|SSH3|54961|slingshot homolog 3 (Drosophila)##AK094226|SSH3|54961|slingshot homolog 3 (Drosophila)##BC007709|SSH3|54961|slingshot homolog 3 (Drosophila)##AB072360|SSH3|54961|slingshot homolog 3 (Drosophila)##AB099291|SSH3|54961|slingshot homolog 3 (Drosophila)##NM_017857|SSH3|54961|slingshot homolog 3 (Drosophila)##AK000522|SSH3|54961|slingshot homolog 3 (Drosophila)##AK124721|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK096277|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK126438|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK096155|LOC100130987|100130987|uncharacterized LOC100130987##AF179890|POLD4|57804|polymerase (DNA-directed), delta 4##BC001334|POLD4|57804|polymerase (DNA-directed), delta 4##BC070250|POLD4|57804|polymerase (DNA-directed), delta 4##AB209274|POLD4|57804|polymerase (DNA-directed), delta 4##NM_021173|POLD4|57804|polymerase (DNA-directed), delta 4##DQ891525|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ894715|CLCF1|23529|cardiotrophin-like cytokine factor 1##AY049779|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066229|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066230|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066231|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF172854|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC012939|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF176911|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_013246|CLCF1|23529|cardiotrophin-like cytokine factor 1	0.944745	CTCF.p2:18:0.945
chr9	133816587	133816713	reg1003754.p1	13.408	+	AK300287 NM_001145106 TSC_hg19_v1_chr9_-_133814549	-2159	-	BC032953 NM_032843 TSC_hg19_v1_chr9_-_133814253	-2406	-	BC112892 AY358311 AK292489 TSC_hg19_v1_chr9_-_133814106	-2599	-	AF041835 NM_006059 TSC_hg19_v1_chr9_+_133884573 AK075536	67900	+	NM_001185095 NM_001185096 NM_031426 TSC_hg19_v1_chr9_+_133971890	155228	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	155308	+	AK300287|FIBCD1|84929|fibrinogen C domain containing 1##NM_001145106|FIBCD1|84929|fibrinogen C domain containing 1##BC032953|FIBCD1|84929|fibrinogen C domain containing 1##NM_032843|FIBCD1|84929|fibrinogen C domain containing 1##BC112892|FIBCD1|84929|fibrinogen C domain containing 1##AY358311|FIBCD1|84929|fibrinogen C domain containing 1##AK292489|FIBCD1|84929|fibrinogen C domain containing 1##AF041835|LAMC3|10319|laminin, gamma 3##NM_006059|LAMC3|10319|laminin, gamma 3##AK075536|LAMC3|10319|laminin, gamma 3##NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like##NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like##NM_031426|AIF1L|83543|allograft inflammatory factor 1-like##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like	0.183284	
chr6	18324546	18324694	reg1005747.p1	13.407	+	X64229 TSC_hg19_v1_chr6_-_18264759 BC012442 AK312616 AK298089 AK294079 BC035259 AK297749 NM_001134709 NM_003472	-59899	-	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	-168965	+	S62904 AK310420 TSC_hg19_v1_chr6_-_18155309 U12387 BC005339 BC009596 NM_000367	-169292	-	AK096832 NM_182757 AB076367 BC063311 AL832329	63047	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	1513015	+	TSC_hg19_v1_chr6_+_19838612 AF085889	1514063	+	X64229|DEK|7913|DEK oncogene##BC012442|DEK|7913|DEK oncogene##AK312616|DEK|7913|DEK oncogene##AK298089|DEK|7913|DEK oncogene##AK294079|DEK|7913|DEK oncogene##BC035259|DEK|7913|DEK oncogene##AK297749|DEK|7913|DEK oncogene##NM_001134709|DEK|7913|DEK oncogene##NM_003472|DEK|7913|DEK oncogene##BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B##S62904|TPMT|7172|thiopurine S-methyltransferase##AK310420|TPMT|7172|thiopurine S-methyltransferase##U12387|TPMT|7172|thiopurine S-methyltransferase##BC005339|TPMT|7172|thiopurine S-methyltransferase##BC009596|TPMT|7172|thiopurine S-methyltransferase##NM_000367|TPMT|7172|thiopurine S-methyltransferase##AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein	0.773252	CTCF.p2:-16:0.773
chr12	54608629	54608757	reg1003590.p1	13.406	+	BC088352 BC000417 TSC_hg19_v1_chr12_-_54582755 AK091468 AX747003 NM_001243789 NM_001243790 BC105607 AK001789 AK001235 AK222473 AK290274 NM_001243787 NM_001243788 NM_001243791 NM_014311	-26007	-	BC030212 TSC_hg19_v1_chr12_-_54541132	-67612	-	TSC_hg19_v1_chr12_+_54519846 BC009385	-88835	+	BC006821 NM_001127322 TSC_hg19_v1_chr12_-_54653330	44631	-	NM_001127321 TSC_hg19_v1_chr12_-_54653370	44678	-	TSC_hg19_v1_chr12_-_54673880 L07515 S62077	65189	-	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC009385|LOC400043|400043|uncharacterized LOC400043##BC006821|CBX5|23468|chromobox homolog 5##NM_001127322|CBX5|23468|chromobox homolog 5##NM_001127321|CBX5|23468|chromobox homolog 5##L07515|CBX5|23468|chromobox homolog 5##S62077|CBX5|23468|chromobox homolog 5	1.983244	CTCF.p2:-28:1.000	CTCF.p2:44:0.983
chr9	118286876	118286997	reg1003753.p2	13.406	+	AB022761 NM_017418	-382840	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-406463	-	AK313619 NM_001244 NM_001252290	-594062	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	629134	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	1162526	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	1162670	+	AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32	0.770403	CTCF.p2:5:0.770
chr10	112114179	112114313	reg1005635.p1	13.405	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-49546	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-49653	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-128425	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	143505	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	213246	+	AF067163 TSC_hg19_v1_chr10_+_112344155	229869	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.913418	CTCF.p2:2:0.913
chr2	198243246	198243373	reg1004632.p1	13.405	+	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	-67790	-	TSC_hg19_v1_chr2_-_198175459 BC063622	-67836	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	-67927	-	AF054284 TSC_hg19_v1_chr2_-_198299735 BC039020 AF086296 BC064335	56420	-	BC046140 BC107883 TSC_hg19_v1_chr2_-_198299753 AK290470 BC029418 BC015530	56442	-	BC056155 AK308122 TSC_hg19_v1_chr2_-_198299772 NM_001005526 NM_012433 AK294851	56476	-	BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##AK124039|ANKRD44|91526|ankyrin repeat domain 44##AF054284|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC039020|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AF086296|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC064335|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC046140|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC107883|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AK290470|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC029418|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC015530|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC056155|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AK308122|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##NM_001005526|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##NM_012433|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AK294851|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	0.0	
chr7	72866233	72866367	reg1006053.p1	13.405	+	NM_003508 BC026333	-18190	+	NM_001135211 AK302121 NM_003602 AK310255 BC036817 AF038847 CU691432 EU176233 EU176537 GQ129339 GQ129340	-124008	+	AK057366 AY081948 AY081949 NM_178125	-124216	-	BC136520 BC065029 TSC_hg19_v1_chr7_-_72936492	70183	-	TSC_hg19_v1_chr7_-_72936538 AF084479	70249	-	TSC_hg19_v1_chr7_-_72936624 AB032253 AF072810 NM_032408	70315	-	NM_003508|FZD9|8326|frizzled family receptor 9##BC026333|FZD9|8326|frizzled family receptor 9##NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa##AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa##NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa##AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa##BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa##AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50##BC136520|BAZ1B|9031|bromodomain adjacent to zinc finger domain, 1B##BC065029|BAZ1B|9031|bromodomain adjacent to zinc finger domain, 1B##AF084479|BAZ1B|9031|bromodomain adjacent to zinc finger domain, 1B##AB032253|BAZ1B|9031|bromodomain adjacent to zinc finger domain, 1B##AF072810|BAZ1B|9031|bromodomain adjacent to zinc finger domain, 1B##NM_032408|BAZ1B|9031|bromodomain adjacent to zinc finger domain, 1B	0.909642	CTCF.p2:11:0.910
chr6	166264049	166264160	reg1003993.p1	13.404	+	AY203946 TSC_hg19_v1_chr6_-_166076051	-188052	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	-188408	-	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	-541012	-	TSC_hg19_v1_chr6_-_166401424 AK289375	137329	-	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	137430	-	BC098425 NM_003181	318025	-	AY203946|LOC100132188|100132188|LP7097##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AK289375|LINC00473|90632|long intergenic non-protein coding RNA 473##BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)	0.999867	CTCF.p2:14:1.000
chr2	164917763	164917897	reg1004926.p1	13.403	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	-325313	-	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-1222583	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-1222706	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	507174	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	560063	-	TSC_hg19_v1_chr2_-_165477987 AK307744 AK313153	560163	-	BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14##AK307744|GRB14|2888|growth factor receptor-bound protein 14##AK313153|GRB14|2888|growth factor receptor-bound protein 14	0.400048	CTCF.p2:10:0.400
chr11	64877887	64878010	reg1005668.p1	13.399	+	BC010872 TSC_hg19_v1_chr11_+_64863712 BC007198 BC017438	-14234	+	TSC_hg19_v1_chr11_+_64863710 BC010540	-14243	+	TSC_hg19_v1_chr11_+_64863684 AF024631 NM_013265	-14303	+	TSC_hg19_v1_chr11_+_64879343 NM_003273 AK290935 AK296441 BC038353 BC009052 AF096304 AF023676 BC012857 CU679239 CU680420	1442	+	AK223333 BC041076 AK027081 BC057799 BC029825 BC038089 AF119497 NM_014205 BC052240 AK223358	7203	-	TSC_hg19_v1_chr11_-_64889607 BC051834 BC033877 D28403 X65923 AK026639 NM_001997	11678	-	BC010872|C11orf2|738|chromosome 11 open reading frame 2##BC007198|C11orf2|738|chromosome 11 open reading frame 2##BC017438|C11orf2|738|chromosome 11 open reading frame 2##BC010540|C11orf2|738|chromosome 11 open reading frame 2##AF024631|C11orf2|738|chromosome 11 open reading frame 2##NM_013265|C11orf2|738|chromosome 11 open reading frame 2##NM_003273|TM7SF2|7108|transmembrane 7 superfamily member 2##AK290935|TM7SF2|7108|transmembrane 7 superfamily member 2##AK296441|TM7SF2|7108|transmembrane 7 superfamily member 2##BC038353|TM7SF2|7108|transmembrane 7 superfamily member 2##BC009052|TM7SF2|7108|transmembrane 7 superfamily member 2##AF096304|TM7SF2|7108|transmembrane 7 superfamily member 2##AF023676|TM7SF2|7108|transmembrane 7 superfamily member 2##BC012857|TM7SF2|7108|transmembrane 7 superfamily member 2##AK223333|ZNHIT2|741|zinc finger, HIT-type containing 2##AK027081|ZNHIT2|741|zinc finger, HIT-type containing 2##BC057799|ZNHIT2|741|zinc finger, HIT-type containing 2##BC029825|ZNHIT2|741|zinc finger, HIT-type containing 2##BC038089|ZNHIT2|741|zinc finger, HIT-type containing 2##AF119497|ZNHIT2|741|zinc finger, HIT-type containing 2##NM_014205|ZNHIT2|741|zinc finger, HIT-type containing 2##BC052240|ZNHIT2|741|zinc finger, HIT-type containing 2##AK223358|ZNHIT2|741|zinc finger, HIT-type containing 2##BC051834|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##BC033877|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##D28403|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##X65923|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##AK026639|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##NM_001997|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed	0.957469	CTCF.p2:4:0.957
chr1	224701553	224701685	reg1004452.p1	13.397	+	AB209887 NM_001115113 NM_025160	-79619	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-79859	-	BC000573 TSC_hg19_v1_chr1_+_224544609 AK222634 BX649076 AM392966 AM393151 AM393502 DQ891901 DQ895087	-157008	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	102560	+	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	415746	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	914110	-	AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##BC000573|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK222634|CNIH4|29097|cornichon homolog 4 (Drosophila)##BX649076|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM392966|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM393151|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM393502|CNIH4|29097|cornichon homolog 4 (Drosophila)##DQ891901|CNIH4|29097|cornichon homolog 4 (Drosophila)##DQ895087|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor	1.036323	CTCF.p2:-23:1.000
chr2	111257718	111257831	reg1003759.p2	13.397	+	BC094740 NM_001205288 NM_033514	-27123	-	TSC_hg19_v1_chr2_-_110970123 BC031315	-287653	-	AJ001815 BC032939 TSC_hg19_v1_chr2_-_110962582 BX571745 NM_000272 NM_001128178 NM_001128179 NM_207181	-295167	-	NM_005054 U64675	76903	-	AL136868 NM_001037866 NM_001123363 NM_032260	78534	-	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	177869	-	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##BC031315|LINC00116|205251|long intergenic non-protein coding RNA 116##AJ001815|NPHP1|4867|nephronophthisis 1 (juvenile)##BC032939|NPHP1|4867|nephronophthisis 1 (juvenile)##BX571745|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_000272|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128178|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128179|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_207181|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)	0.222094	CTCF.p2:4:0.222
chr7	102313266	102313383	reg1005483.p1	13.397	+	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	-1204	-	AK302217 NM_001031618 NM_001166339	-22553	+	EU341824 NM_001114403 AK296589	-30048	-	TSC_hg19_v1_chr7_+_102389473 NM_001145268 NM_001145269 BC029175 AK297455 AK298753 AK054745 DQ893359 DQ896678	76166	+	NM_001031692 NM_005824 TSC_hg19_v1_chr7_+_102553446 AK226021 AK225701 U32907 AK290305 BC027903 AY358889	240108	+	AK097537 NM_145032	401690	-	BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##EU341824|UPK3BL|100134938|uroplakin 3B-like##NM_001114403|UPK3BL|100134938|uroplakin 3B-like##NM_001145268|FAM185A|222234|family with sequence similarity 185, member A##NM_001145269|FAM185A|222234|family with sequence similarity 185, member A##BC029175|FAM185A|222234|family with sequence similarity 185, member A##AK297455|FAM185A|222234|family with sequence similarity 185, member A##AK298753|FAM185A|222234|family with sequence similarity 185, member A##AK054745|FAM185A|222234|family with sequence similarity 185, member A##DQ893359|FAM185A|222234|family with sequence similarity 185, member A##DQ896678|FAM185A|222234|family with sequence similarity 185, member A##NM_001031692|LRRC17|10234|leucine rich repeat containing 17##NM_005824|LRRC17|10234|leucine rich repeat containing 17##AK226021|LRRC17|10234|leucine rich repeat containing 17##AK225701|LRRC17|10234|leucine rich repeat containing 17##U32907|LRRC17|10234|leucine rich repeat containing 17##AK290305|LRRC17|10234|leucine rich repeat containing 17##BC027903|LRRC17|10234|leucine rich repeat containing 17##AY358889|LRRC17|10234|leucine rich repeat containing 17##AK097537|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_145032|FBXL13|222235|F-box and leucine-rich repeat protein 13	0.830069	CTCF.p2:-12:0.830
chr4	183994837	183994976	reg1004643.p1	13.395	+	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	-156272	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	-156376	-	NM_001080477 HE578284 HE578285	-749752	+	TSC_hg19_v1_chr4_+_184020431 NM_024949	25572	+	NM_001111319	247020	-	NM_001185149	248672	-	NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_024949|WWC2|80014|WW and C2 domain containing 2##NM_001111319|CLDN22|53842|claudin 22##NM_001185149|CLDN24|100132463|claudin 24	0.999706	CTCF.p2:-13:1.000
chr17	7892155	7892276	reg1005048.p1	13.394	+	NM_001037144 NM_053051 AY160226 AY160227 TSC_hg19_v1_chr17_+_7835522 AK293076 AF331638 BC021134 AL833907	-56686	+	AB528455 DQ890860 DQ894015 BC025413 TSC_hg19_v1_chr17_-_7835265 BC032717 AK314038 NM_021210 NM_001166621	-56955	-	AF016411 BC096232 BC096233 BC096234 BC099634 NM_004732	-59463	-	DQ426876 NM_000180 M92432	13736	+	AK298095 NM_001039130 NM_001039131 NM_001141 AK292779 AK300554 BC063647 U78294 BC035217 BC033294 AB590334 DQ891345 EU176579 AF468051 AF468052 AF468053 AF468054	50197	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	67987	+	NM_001037144|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##NM_053051|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160226|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160227|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AK293076|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AF331638|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##BC021134|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AL833907|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##DQ890860|TRAPPC1|58485|trafficking protein particle complex 1##DQ894015|TRAPPC1|58485|trafficking protein particle complex 1##BC025413|TRAPPC1|58485|trafficking protein particle complex 1##BC032717|TRAPPC1|58485|trafficking protein particle complex 1##AK314038|TRAPPC1|58485|trafficking protein particle complex 1##NM_021210|TRAPPC1|58485|trafficking protein particle complex 1##NM_001166621|TRAPPC1|58485|trafficking protein particle complex 1##AF016411|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096232|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096233|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096234|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC099634|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_004732|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_000180|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##M92432|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##AK298095|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039130|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039131|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001141|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK292779|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK300554|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC063647|ALOX15B|247|arachidonate 15-lipoxygenase, type B##U78294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC035217|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC033294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##DQ891345|ALOX15B|247|arachidonate 15-lipoxygenase, type B##EU176579|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468051|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468052|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468053|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468054|ALOX15B|247|arachidonate 15-lipoxygenase, type B	0.995072	CTCF.p2:1:0.995
chr19	46302389	46302546	reg1005684.p1	13.394	+	TSC_hg19_v1_chr19_-_46296053 NM_004943	-6536	-	L19267 TSC_hg19_v1_chr19_-_46295709	-6789	-	TSC_hg19_v1_chr19_-_46285763 BC026328 NM_001081560 NM_001081562 NM_004409	-16684	-	BC057785 AB587490 AM393487 BC146683 BC136351 BC136352 BC144018 AK098837 AK223347 AL136761 NM_030785	16051	-	AF049526 TSC_hg19_v1_chr19_-_46366406 Y10931 AB210010 BC030214 AK300252 BX649165 AK130602 NM_004819	63977	-	BC016024 NM_004497 TSC_hg19_v1_chr19_+_46367583 AK223473 AB464526 BT006720 CU677549 L12141	65148	+	NM_004943|DMWD|1762|dystrophia myotonica, WD repeat containing##L19267|DMWD|1762|dystrophia myotonica, WD repeat containing##BC026328|DMPK|1760|dystrophia myotonica-protein kinase##NM_001081560|DMPK|1760|dystrophia myotonica-protein kinase##NM_001081562|DMPK|1760|dystrophia myotonica-protein kinase##NM_004409|DMPK|1760|dystrophia myotonica-protein kinase##BC057785|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AM393487|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC146683|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC136351|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC136352|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC144018|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AK098837|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AK223347|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AL136761|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##NM_030785|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AF049526|SYMPK|8189|symplekin##Y10931|SYMPK|8189|symplekin##AB210010|SYMPK|8189|symplekin##BC030214|SYMPK|8189|symplekin##AK300252|SYMPK|8189|symplekin##BX649165|SYMPK|8189|symplekin##AK130602|SYMPK|8189|symplekin##NM_004819|SYMPK|8189|symplekin##BC016024|FOXA3|3171|forkhead box A3##NM_004497|FOXA3|3171|forkhead box A3##AK223473|FOXA3|3171|forkhead box A3##BT006720|FOXA3|3171|forkhead box A3##L12141|FOXA3|3171|forkhead box A3	0.987057	CTCF.p2:0:0.987
chr10	87755678	87755808	reg1006273.p1	13.391	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-1571048	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-1624125	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-1667349	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	370520	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	525751	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	525787	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.961128	CTCF.p2:0:0.961
chr16	8885879	8886003	reg1004324.p1	13.391	+	TSC_hg19_v1_chr16_+_8814575 AK290501 NM_001127448 AK310771	-71361	+	TSC_hg19_v1_chr16_+_8807457 AK293983	-78493	+	TSC_hg19_v1_chr16_+_8807190 AK054834	-78739	+	TSC_hg19_v1_chr16_-_8891497 BC015912 AK225638 AL080088 AK314404 NM_015421 AK093383	5604	-	NM_000303 TSC_hg19_v1_chr16_+_8891675 AK296123 U85773 AK300785 AK291537 AK299979 AK311035 AK312532 AK304320 AK296630 BC008310	5757	+	NM_001042476 BC001333	76311	-	AK290501|ABAT|18|4-aminobutyrate aminotransferase##NM_001127448|ABAT|18|4-aminobutyrate aminotransferase##AK310771|ABAT|18|4-aminobutyrate aminotransferase##AK293983|ABAT|18|4-aminobutyrate aminotransferase##AK054834|ABAT|18|4-aminobutyrate aminotransferase##BC015912|TMEM186|25880|transmembrane protein 186##AK225638|TMEM186|25880|transmembrane protein 186##AL080088|TMEM186|25880|transmembrane protein 186##AK314404|TMEM186|25880|transmembrane protein 186##NM_015421|TMEM186|25880|transmembrane protein 186##AK093383|TMEM186|25880|transmembrane protein 186##NM_000303|PMM2|5373|phosphomannomutase 2##U85773|PMM2|5373|phosphomannomutase 2##AK300785|PMM2|5373|phosphomannomutase 2##AK291537|PMM2|5373|phosphomannomutase 2##AK299979|PMM2|5373|phosphomannomutase 2##AK311035|PMM2|5373|phosphomannomutase 2##AK312532|PMM2|5373|phosphomannomutase 2##AK304320|PMM2|5373|phosphomannomutase 2##AK296630|PMM2|5373|phosphomannomutase 2##BC008310|PMM2|5373|phosphomannomutase 2##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa	0.994124	CTCF.p2:-1:0.994
chr1	90452885	90453009	reg1003949.p2	13.390	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-165383	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-165489	+	TSC_hg19_v1_chr1_+_90286603 AK092238 AX747423	-166348	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	7769	+	BC126439 BC126441 AY338397 NM_020063	729838	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	1034091	-	BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##AK092238|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644	0.99473	CTCF.p2:9:0.995
chr2	55127128	55127239	reg1003459.p2	13.390	+	NM_001039753	-175035	+	TSC_hg19_v1_chr2_+_54785519 AF327441 NM_178313 BC137282 BC137283	-341618	+	TSC_hg19_v1_chr2_+_54684338 BC032061	-442816	+	TSC_hg19_v1_chr2_-_55199899 BC131571	72725	-	AJ251385 AM392753 AM393122 AM393280 AM393537 BC139928 DQ778739 AF087901 BC014366 TSC_hg19_v1_chr2_-_55237387 BC007109 AF177332 AF132048 BC001035 AF077050 AF125103 NM_007008 AY102276	110189	-	AK302741 AF333336 NM_207521 AY123248	149127	-	NM_001039753|EML6|400954|echinoderm microtubule associated protein like 6##AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AJ251385|RTN4|57142|reticulon 4##AM392753|RTN4|57142|reticulon 4##AM393122|RTN4|57142|reticulon 4##AM393280|RTN4|57142|reticulon 4##AM393537|RTN4|57142|reticulon 4##BC139928|RTN4|57142|reticulon 4##DQ778739|RTN4|57142|reticulon 4##AF087901|RTN4|57142|reticulon 4##BC014366|RTN4|57142|reticulon 4##BC007109|RTN4|57142|reticulon 4##AF177332|RTN4|57142|reticulon 4##AF132048|RTN4|57142|reticulon 4##BC001035|RTN4|57142|reticulon 4##AF077050|RTN4|57142|reticulon 4##AF125103|RTN4|57142|reticulon 4##NM_007008|RTN4|57142|reticulon 4##AY102276|RTN4|57142|reticulon 4##AK302741|RTN4|57142|reticulon 4##AF333336|RTN4|57142|reticulon 4##NM_207521|RTN4|57142|reticulon 4##AY123248|RTN4|57142|reticulon 4	0.984096	CTCF.p2:-17:0.984
chr19	42297177	42297282	reg1004183.p2	13.389	+	NM_002483 TSC_hg19_v1_chr19_+_42259437 AK312542 M29541 M18728 M18216 BC005008 BT009774	-37758	+	M16234 TSC_hg19_v1_chr19_+_42221424	-75811	+	TSC_hg19_v1_chr19_+_42212619 CR749337 DQ890840 DQ896753 CU689928 M15042 X16455	-84593	+	AK298694 NM_001815 D90277 D90278 L00692 L00693 BC106728	3323	+	AY358726 NM_173506	51278	-	AK057404 AK301822 NM_001040283 BC039266 BC029202	51842	+	NM_002483|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##AK312542|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M29541|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18728|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18216|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BC005008|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BT009774|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M16234|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##CR749337|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ890840|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ896753|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M15042|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##X16455|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##NM_001815|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90277|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90278|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00692|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00693|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##BC106728|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##AY358726|LYPD4|147719|LY6/PLAUR domain containing 4##NM_173506|LYPD4|147719|LY6/PLAUR domain containing 4##AK057404|DMRTC2|63946|DMRT-like family C2##AK301822|DMRTC2|63946|DMRT-like family C2##NM_001040283|DMRTC2|63946|DMRT-like family C2##BC039266|DMRTC2|63946|DMRT-like family C2##BC029202|DMRTC2|63946|DMRT-like family C2	0.695389	CTCF.p2:-3:0.695
chr8	38824119	38824233	reg1003564.p2	13.389	+	AK098787 NM_021623 TSC_hg19_v1_chr8_+_38758793 AK296068 AK291842 AF286164	-65365	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	-179408	+	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	-179454	+	NM_153692 AK075205 BC057765 AK300197	7533	+	AL834224 BC004878 BC109050 BC109049 AF353991 AK075027 TSC_hg19_v1_chr8_-_38854016 AK225093	29836	-	TSC_hg19_v1_chr8_-_38854029 AK314703 AK075155 NM_001024380 NM_001024381 NM_031940 NM_078473	29856	-	AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_153692|HTRA4|203100|HtrA serine peptidase 4##AK075205|HTRA4|203100|HtrA serine peptidase 4##BC057765|HTRA4|203100|HtrA serine peptidase 4##AK300197|HTRA4|203100|HtrA serine peptidase 4##AL834224|TM2D2|83877|TM2 domain containing 2##BC004878|TM2D2|83877|TM2 domain containing 2##BC109050|TM2D2|83877|TM2 domain containing 2##BC109049|TM2D2|83877|TM2 domain containing 2##AF353991|TM2D2|83877|TM2 domain containing 2##AK075027|TM2D2|83877|TM2 domain containing 2##AK225093|TM2D2|83877|TM2 domain containing 2##AK314703|TM2D2|83877|TM2 domain containing 2##AK075155|TM2D2|83877|TM2 domain containing 2##NM_001024380|TM2D2|83877|TM2 domain containing 2##NM_001024381|TM2D2|83877|TM2 domain containing 2##NM_031940|TM2D2|83877|TM2 domain containing 2##NM_078473|TM2D2|83877|TM2 domain containing 2	0.97949	CTCF.p2:-2:0.979
chr3	194033545	194033668	reg1003493.p1	13.388	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	-179651	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	-179673	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-722441	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	38468	-	BC101064 BC101065 TSC_hg19_v1_chr3_-_194090471 AK125112 NM_001135057 NM_130830	56861	-	NM_004488	86388	-	AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2##BC101064|LRRC15|131578|leucine rich repeat containing 15##BC101065|LRRC15|131578|leucine rich repeat containing 15##AK125112|LRRC15|131578|leucine rich repeat containing 15##NM_001135057|LRRC15|131578|leucine rich repeat containing 15##NM_130830|LRRC15|131578|leucine rich repeat containing 15##NM_004488|GP5|2814|glycoprotein V (platelet)	0.824534	CTCF.p2:29:0.825
chr14	23464043	23464173	reg1006507.p1	13.387	+	TSC_hg19_v1_chr14_-_23451806 BC034968 NM_032876	-12333	-	AK096128 NM_198086	-17677	-	AK025567 TSC_hg19_v1_chr14_-_23445979	-18173	-	BC014299 BX161507 BX161383 BX161417 AK023026 AK022216 NM_001130706 NM_001130708 NM_021944	15235	-	BT006777 S74378 D29011 BC004146 BX248299 AB528985 CU691272 TSC_hg19_v1_chr14_-_23504095 AK300714 BX538001 BC107720 BC057840 AK311895 AK225888	39914	-	NM_001144932 NM_002797 NM_001130725	40282	-	BC034968|AJUBA|84962|ajuba LIM protein##NM_032876|AJUBA|84962|ajuba LIM protein##AK096128|AJUBA|84962|ajuba LIM protein##NM_198086|AJUBA|84962|ajuba LIM protein##AK025567|AJUBA|84962|ajuba LIM protein##BC014299|C14orf93|60686|chromosome 14 open reading frame 93##BX161507|C14orf93|60686|chromosome 14 open reading frame 93##BX161383|C14orf93|60686|chromosome 14 open reading frame 93##BX161417|C14orf93|60686|chromosome 14 open reading frame 93##AK023026|C14orf93|60686|chromosome 14 open reading frame 93##AK022216|C14orf93|60686|chromosome 14 open reading frame 93##NM_001130706|C14orf93|60686|chromosome 14 open reading frame 93##NM_001130708|C14orf93|60686|chromosome 14 open reading frame 93##NM_021944|C14orf93|60686|chromosome 14 open reading frame 93##BT006777|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##S74378|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BX248299|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK300714|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BX538001|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BC107720|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BC057840|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK311895|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK225888|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_001144932|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_002797|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_001130725|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5	0.880659	CTCF.p2:0:0.881
chr6	27740327	27740460	reg1005834.p1	13.387	+	TSC_hg19_v1_chr6_-_27440879 BC022992 AK123011 AK312804 NM_007149	-299692	-	TSC_hg19_v1_chr6_+_27356537 NM_001076781 AK092633 AK294965 AX747641 BC132797	-383838	+	AF352327 AF336874 BC107050 NM_032030	-447835	+	EU446971 TSC_hg19_v1_chr6_-_27775708 NM_003519 AK312114 BC093759 BC093761	35330	-	BC112254 BC112256 TSC_hg19_v1_chr6_+_27775950 AK311766 BC062305 NM_003509 HQ258047	35548	+	BC007518 TSC_hg19_v1_chr6_+_27777828 AK311991 NM_003536 EU446975 BC096128 BC096129 BC096130 BC143046 BC148243 BC148250	37389	+	BC022992|ZNF184|7738|zinc finger protein 184##AK123011|ZNF184|7738|zinc finger protein 184##AK312804|ZNF184|7738|zinc finger protein 184##NM_007149|ZNF184|7738|zinc finger protein 184##NM_001076781|ZNF391|346157|zinc finger protein 391##AK092633|ZNF391|346157|zinc finger protein 391##AK294965|ZNF391|346157|zinc finger protein 391##BC132797|ZNF391|346157|zinc finger protein 391##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83##EU446971|HIST1H2BL|8340|histone cluster 1, H2bl##NM_003519|HIST1H2BL|8340|histone cluster 1, H2bl##AK312114|HIST1H2BL|8340|histone cluster 1, H2bl##BC093759|HIST1H2BL|8340|histone cluster 1, H2bl##BC093761|HIST1H2BL|8340|histone cluster 1, H2bl##BC112254|HIST1H2AI|8329|histone cluster 1, H2ai##BC112256|HIST1H2AI|8329|histone cluster 1, H2ai##AK311766|HIST1H2AI|8329|histone cluster 1, H2ai##BC062305|HIST1H3F|8968|histone cluster 1, H3f##NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai##HQ258047|HIST1H2AM|8336|histone cluster 1, H2am##BC007518|HIST1H3H|8357|histone cluster 1, H3h##AK311991|HIST1H3H|8357|histone cluster 1, H3h##NM_003536|HIST1H3H|8357|histone cluster 1, H3h##EU446975|HIST1H3H|8357|histone cluster 1, H3h##BC096128|HIST1H3H|8357|histone cluster 1, H3h##BC096129|HIST1H3H|8357|histone cluster 1, H3h##BC096130|HIST1H3H|8357|histone cluster 1, H3h##BC143046|HIST1H3H|8357|histone cluster 1, H3h##BC148243|HIST1H3H|8357|histone cluster 1, H3h##BC148250|HIST1H3H|8357|histone cluster 1, H3h	0.513154	CTCF.p2:10:0.513
chr9	25964316	25964439	reg1005646.p1	13.386	+	NM_001004125	-285522	-	BC017510 TSC_hg19_v1_chr9_-_25678278 BC046919 AY168647 BC110824	-286044	-	AB209294 NM_004432	-2138315	-	AK131322 NM_001004352	102295	+	AB590748 CU687198 BC071953 TSC_hg19_v1_chr9_-_26892779 AK023719 BC014658 NM_001167575 NM_024828	928392	-	EU176453 EU176795 AB385043 TSC_hg19_v1_chr9_-_26947158 BC032551 AK022761	982727	-	NM_001004125|TUSC1|286319|tumor suppressor candidate 1##BC017510|TUSC1|286319|tumor suppressor candidate 1##BC046919|TUSC1|286319|tumor suppressor candidate 1##AY168647|TUSC1|286319|tumor suppressor candidate 1##BC110824|TUSC1|286319|tumor suppressor candidate 1##AB209294|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_004432|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##AK131322|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004352|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##BC071953|C9orf82|79886|chromosome 9 open reading frame 82##AK023719|C9orf82|79886|chromosome 9 open reading frame 82##BC014658|C9orf82|79886|chromosome 9 open reading frame 82##NM_001167575|C9orf82|79886|chromosome 9 open reading frame 82##NM_024828|C9orf82|79886|chromosome 9 open reading frame 82##EU176453|PLAA|9373|phospholipase A2-activating protein##EU176795|PLAA|9373|phospholipase A2-activating protein##BC032551|PLAA|9373|phospholipase A2-activating protein##AK022761|PLAA|9373|phospholipase A2-activating protein	0.939688	CTCF.p2:-24:0.940
chr4	99977324	99977440	reg1004210.p1	13.385	+	TSC_hg19_v1_chr4_+_99916874 D42084 AB385277	-60494	+	TSC_hg19_v1_chr4_+_99916871 AK304239	-60523	+	NM_015143 TSC_hg19_v1_chr4_+_99916843	-60567	+	AB462942 BC014665 M30471 TSC_hg19_v1_chr4_-_100009858	32473	-	TSC_hg19_v1_chr4_-_100009865 AK129570 BC070491 AK312367 M29872	32501	-	TSC_hg19_v1_chr4_-_100009912 NM_000671	32539	-	D42084|METAP1|23173|methionyl aminopeptidase 1##AK304239|METAP1|23173|methionyl aminopeptidase 1##NM_015143|METAP1|23173|methionyl aminopeptidase 1##BC014665|ADH5|128|alcohol dehydrogenase 5 (class III), chi polypeptide##M30471|ADH5|128|alcohol dehydrogenase 5 (class III), chi polypeptide##AK129570|ADH5|128|alcohol dehydrogenase 5 (class III), chi polypeptide##BC070491|ADH5|128|alcohol dehydrogenase 5 (class III), chi polypeptide##AK312367|ADH5|128|alcohol dehydrogenase 5 (class III), chi polypeptide##M29872|ADH5|128|alcohol dehydrogenase 5 (class III), chi polypeptide##NM_000671|ADH5|128|alcohol dehydrogenase 5 (class III), chi polypeptide	0.219622	CTCF.p2:-1:0.220
chr14	68171291	68171424	reg1004499.p1	13.384	+	AK315462 NM_152443	-2755	+	CR457180 CU680026 CU691474 CU693194 BC011727 BC000112 TSC_hg19_v1_chr14_-_68162477 AK289427 BC026274 DQ426886 AK057195 AK293355 BC051291 AF151840 AF167438 AF395068 AK307500 AK314465 BC037302 AK074749 NM_001252650 NM_016026	-8893	-	TSC_hg19_v1_chr14_-_68141331 AK291689 AK316572 BC003142 BC001598 AF060902 NM_006370	-29893	-	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	111942	-	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	115163	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	1088363	-	AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##CR457180|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##BC011727|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##BC000112|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK289427|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##BC026274|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##DQ426886|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK057195|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK293355|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##BC051291|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AF151840|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AF167438|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AF395068|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK307500|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK314465|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##BC037302|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK074749|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##NM_001252650|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##NM_016026|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK291689|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##AK316572|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##BC003142|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##AF060902|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##NM_006370|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.025025	
chr15	78192781	78192922	reg1004773.p2	13.384	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-268071	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-268152	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-479589	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	177102	-	NM_001101404	192075	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	230911	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.956848	CTCF.p2:15:0.858
chr19	48269273	48269369	reg1002185.p1	13.384	+	TSC_hg19_v1_chr19_+_48248802 AK303180 AK297877 AK303918 AK309788 AK301117 AF182076 BC006311 BC013203 AY535000 CU679611 DQ892724 DQ895973 AK024486 BC013235 BC013307 BC014009 BC039869 BC007248 BC004229 AF296124 AL359336 AL359335	-20486	+	NM_015710 TSC_hg19_v1_chr19_+_48248797	-20527	+	NM_014601 TSC_hg19_v1_chr19_+_48216678 AK315548 AK074701 AK097126 AK097228 AK296907 AK298067 BC014445	-52671	+	NM_003009 TSC_hg19_v1_chr19_+_48281965 BC039597 BC032546 BC047893 BC000581 U67171 AF015283	12605	+	BC137501 BC141863 BC144673 AK097640 NM_198479	37516	-	NM_000554 DQ426868 BC016664 DQ426867 BC053672	55834	+	AK297877|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK303918|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK309788|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK301117|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF182076|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC006311|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013203|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AY535000|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ892724|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ895973|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK024486|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013235|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013307|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC014009|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC039869|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC007248|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC004229|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF296124|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359336|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359335|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##NM_015710|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##NM_014601|EHD2|30846|EH-domain containing 2##AK315548|EHD2|30846|EH-domain containing 2##AK074701|EHD2|30846|EH-domain containing 2##AK097126|EHD2|30846|EH-domain containing 2##AK097228|EHD2|30846|EH-domain containing 2##AK296907|EHD2|30846|EH-domain containing 2##AK298067|EHD2|30846|EH-domain containing 2##BC014445|EHD2|30846|EH-domain containing 2##NM_003009|SEPW1|6415|selenoprotein W, 1##BC039597|SEPW1|6415|selenoprotein W, 1##BC032546|SEPW1|6415|selenoprotein W, 1##BC047893|SEPW1|6415|selenoprotein W, 1##BC000581|SEPW1|6415|selenoprotein W, 1##U67171|SEPW1|6415|selenoprotein W, 1##AF015283|SEPW1|6415|selenoprotein W, 1##BC137501|TPRX1|284355|tetra-peptide repeat homeobox 1##BC141863|TPRX1|284355|tetra-peptide repeat homeobox 1##BC144673|TPRX1|284355|tetra-peptide repeat homeobox 1##AK097640|TPRX1|284355|tetra-peptide repeat homeobox 1##NM_198479|TPRX1|284355|tetra-peptide repeat homeobox 1##NM_000554|CRX|1406|cone-rod homeobox##DQ426868|CRX|1406|cone-rod homeobox##BC016664|CRX|1406|cone-rod homeobox##DQ426867|CRX|1406|cone-rod homeobox##BC053672|CRX|1406|cone-rod homeobox	0.554909	CTCF.p2:-3:0.530
chr2	71098750	71098891	reg1006237.p1	13.384	+	CU692528 DQ891964 DQ895154 AK314927 BC022278 AJ242859 NM_015717	-35892	-	BC139723 BC144652 AK096429 AK301242 NM_173535	-51116	-	BC039536 AB463644 AY541030 NM_001004311	-81068	-	TSC_hg19_v1_chr2_+_71127705 AB593145	28883	+	TSC_hg19_v1_chr2_+_71127724 NM_012476 Y17791	28899	+	TSC_hg19_v1_chr2_+_71127738 BC006336 AB527952 BT007035	28918	+	DQ891964|CD207|50489|CD207 molecule, langerin##DQ895154|CD207|50489|CD207 molecule, langerin##AK314927|CD207|50489|CD207 molecule, langerin##BC022278|CD207|50489|CD207 molecule, langerin##AJ242859|CD207|50489|CD207 molecule, langerin##NM_015717|CD207|50489|CD207 molecule, langerin##BC139723|CLEC4F|165530|C-type lectin domain family 4, member F##BC144652|CLEC4F|165530|C-type lectin domain family 4, member F##AK096429|CLEC4F|165530|C-type lectin domain family 4, member F##AK301242|CLEC4F|165530|C-type lectin domain family 4, member F##NM_173535|CLEC4F|165530|C-type lectin domain family 4, member F##BC039536|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##AY541030|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##NM_001004311|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##AB593145|VAX2|25806|ventral anterior homeobox 2##NM_012476|VAX2|25806|ventral anterior homeobox 2##Y17791|VAX2|25806|ventral anterior homeobox 2##BC006336|VAX2|25806|ventral anterior homeobox 2##BT007035|VAX2|25806|ventral anterior homeobox 2	0.999841	CTCF.p2:-15:1.000
chr5	174378314	174378432	reg1004938.p1	13.384	+	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	-226761	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-905621	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	-905662	+	NM_000794	492789	-	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	527189	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	706665	+	NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##NM_000794|DRD1|1812|dopamine receptor D1##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2	0.99813	CTCF.p2:-13:0.998
chr18	21202335	21202452	reg1005878.p1	13.383	+	TSC_hg19_v1_chr18_-_21166458 AK295715 NM_000271	-35883	-	TSC_hg19_v1_chr18_-_21166428 BC063302 AF002020	-35985	-	TSC_hg19_v1_chr18_+_21083474 NM_013326 AK057192 AK295246 AK296230 AK294169 BC008305 BC002950	-118919	+	TSC_hg19_v1_chr18_-_21242592 CU688952 AK313667 AK057782 BC030622 NM_173505	40327	-	TSC_hg19_v1_chr18_+_21269416 AK096422	67021	+	TSC_hg19_v1_chr18_+_21269563 BC093406 NM_001127717 NM_198129 AY327115 AY327116	67194	+	AK295715|NPC1|4864|Niemann-Pick disease, type C1##NM_000271|NPC1|4864|Niemann-Pick disease, type C1##BC063302|NPC1|4864|Niemann-Pick disease, type C1##AF002020|NPC1|4864|Niemann-Pick disease, type C1##NM_013326|C18orf8|29919|chromosome 18 open reading frame 8##AK057192|C18orf8|29919|chromosome 18 open reading frame 8##AK295246|C18orf8|29919|chromosome 18 open reading frame 8##AK296230|C18orf8|29919|chromosome 18 open reading frame 8##AK294169|C18orf8|29919|chromosome 18 open reading frame 8##BC008305|C18orf8|29919|chromosome 18 open reading frame 8##BC002950|C18orf8|29919|chromosome 18 open reading frame 8##AK313667|ANKRD29|147463|ankyrin repeat domain 29##AK057782|ANKRD29|147463|ankyrin repeat domain 29##BC030622|ANKRD29|147463|ankyrin repeat domain 29##NM_173505|ANKRD29|147463|ankyrin repeat domain 29##AK096422|LAMA3|3909|laminin, alpha 3##BC093406|LAMA3|3909|laminin, alpha 3##NM_001127717|LAMA3|3909|laminin, alpha 3##NM_198129|LAMA3|3909|laminin, alpha 3##AY327115|LAMA3|3909|laminin, alpha 3##AY327116|LAMA3|3909|laminin, alpha 3	0.993943	CTCF.p2:-8:0.994
chr9	134637993	134638108	reg1003984.p1	13.383	+	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	-22760	-	D21239 NM_005312	-25126	-	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	-52848	-	Z36848 AF104252 AF230382 DQ099387 AB527898 EU446747 TSC_hg19_v1_chr9_-_134955238 BC064608 BC070331	317099	-	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	317200	-	TSC_hg19_v1_chr9_+_135037083 AY358165	399041	+	EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##Z36848|MED27|9442|mediator complex subunit 27##AF104252|MED27|9442|mediator complex subunit 27##AF230382|MED27|9442|mediator complex subunit 27##DQ099387|MED27|9442|mediator complex subunit 27##EU446747|MED27|9442|mediator complex subunit 27##BC064608|MED27|9442|mediator complex subunit 27##BC070331|MED27|9442|mediator complex subunit 27##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AY358165|NTNG2|84628|netrin G2	1.15174	CTCF.p2:-28:1.000
chr12	679022	679185	reg1004312.p1	13.382	+	AB089940 NM_173593	-109561	+	NM_001130146 NM_032358 AK293165 TSC_hg19_v1_chr12_+_510809 AK027638	-168322	+	TSC_hg19_v1_chr12_-_498451 AK301150 AK301273 AB209999 BC048307 BC053893 NM_001042603 BC092417	-180501	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	73075	+	TSC_hg19_v1_chr12_-_752800 AK298043	73716	-	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	93612	-	AB089940|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_173593|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_001130146|CCDC77|84318|coiled-coil domain containing 77##NM_032358|CCDC77|84318|coiled-coil domain containing 77##AK293165|CCDC77|84318|coiled-coil domain containing 77##AK027638|CCDC77|84318|coiled-coil domain containing 77##AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A##AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A##AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A##BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A##BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A##NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A##BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2	0.102133	
chr17	46208703	46208830	reg1004245.p2	13.382	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-23614	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-23781	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-29945	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	298772	-	TSC_hg19_v1_chr17_-_46507604 BC039040	298851	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	399505	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.9981	CTCF.p2:4:0.998
chr22	17539202	17539324	reg1005072.p1	13.382	+	AB076978 NM_001037814	-50152	-	BC137521 BC137522 BC144679 AY989815 AK098608 AY534240 BC045548 NM_175878	-236694	-	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	-465694	-	TSC_hg19_v1_chr22_+_17565850 NM_014339	26588	+	TSC_hg19_v1_chr22_+_17565906 BC011624	26639	+	TSC_hg19_v1_chr22_+_17565921 CT841520 BC012071 U58917 AB527163 CU013105 CU013393 DQ891962 DQ895152 JF305973	26687	+	AB076978|GAB4|128954|GRB2-associated binding protein family, member 4##NM_001037814|GAB4|128954|GRB2-associated binding protein family, member 4##BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014339|IL17RA|23765|interleukin 17 receptor A##BC011624|IL17RA|23765|interleukin 17 receptor A##CT841520|IL17RA|23765|interleukin 17 receptor A##BC012071|IL17RA|23765|interleukin 17 receptor A##U58917|IL17RA|23765|interleukin 17 receptor A##DQ891962|IL17RA|23765|interleukin 17 receptor A##DQ895152|IL17RA|23765|interleukin 17 receptor A##JF305973|IL17RA|23765|interleukin 17 receptor A	0.997785	CTCF.p2:8:0.998
chr22	47154834	47154950	reg1004582.p1	13.382	+	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	-20737	-	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	-20813	-	CR456470 NM_015124 BC129837 AB463563 CU013020 CU013308	-132216	+	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	3708	+	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	872611	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	1730388	+	NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##CR456470|GRAMD4|23151|GRAM domain containing 4##NM_015124|GRAMD4|23151|GRAM domain containing 4##BC129837|GRAMD4|23151|GRAM domain containing 4##NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A##AK093107|LOC284930|284930|uncharacterized LOC284930##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	0.993199	CTCF.p2:-7:0.993
chr6	169295252	169295364	reg1003940.p1	13.380	+	TSC_hg19_v1_chr6_+_168841879 AK056700 AL832303 AB014730 AB014737	-453357	+	TSC_hg19_v1_chr6_+_168841866 BC047583 AJ420521 AK314613	-453446	+	TSC_hg19_v1_chr6_+_168841832 BC028420 NM_001166412 NM_022138	-453473	+	TSC_hg19_v1_chr6_-_169650910 AB384955	355594	-	BC146676 BC150175 TSC_hg19_v1_chr6_-_169653942	358625	-	TSC_hg19_v1_chr6_-_169654117 L12350 NM_003247 AK292429	358806	-	AK056700|SMOC2|64094|SPARC related modular calcium binding 2##AL832303|SMOC2|64094|SPARC related modular calcium binding 2##AB014730|SMOC2|64094|SPARC related modular calcium binding 2##AB014737|SMOC2|64094|SPARC related modular calcium binding 2##BC047583|SMOC2|64094|SPARC related modular calcium binding 2##AJ420521|SMOC2|64094|SPARC related modular calcium binding 2##AK314613|SMOC2|64094|SPARC related modular calcium binding 2##BC028420|SMOC2|64094|SPARC related modular calcium binding 2##NM_001166412|SMOC2|64094|SPARC related modular calcium binding 2##NM_022138|SMOC2|64094|SPARC related modular calcium binding 2##BC146676|THBS2|7058|thrombospondin 2##BC150175|THBS2|7058|thrombospondin 2##L12350|THBS2|7058|thrombospondin 2##NM_003247|THBS2|7058|thrombospondin 2##AK292429|THBS2|7058|thrombospondin 2	0.988077	CTCF.p2:-6:0.988
chr13	105854893	105855038	reg1006815.p1	13.379	+	NM_000452 U10417	-2135770	-	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-2356479	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-2356711	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	263339	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	263626	+	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	1332384	-	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2	0.536119	CTCF.p2:-4:0.536
chr2	223768463	223768583	reg1004455.p2	13.378	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	-42776	+	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	-232114	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	-247729	-	NM_080671 TSC_hg19_v1_chr2_+_223916907 DQ192293 AK313203 BC014429 AY065987	148374	+	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	698543	-	TSC_hg19_v1_chr2_-_224467100 BC022509	698584	-	NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_080671|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##DQ192293|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AK313203|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##BC014429|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AY065987|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II##BC022509|SCG2|7857|secretogranin II	0.995929	CTCF.p2:17:0.996
chr2	26828436	26828577	reg1005795.p1	13.378	+	TSC_hg19_v1_chr2_+_26785463 NM_001105519	-43038	+	AF183185 NM_194248	-46941	-	AF107403 AF183186 AF183187 NM_004802 NM_194322 NM_194323	-127597	-	BC140923 NM_001029881 BC127685 BC127684	35716	-	TSC_hg19_v1_chr2_+_26915710 BC140701 NM_002246 AF006823 AF065163	87137	+	TSC_hg19_v1_chr2_+_26987155 AK000562 NM_017877 BC028081 BC035519 BX647807 AK075164 AK296996 BC011013 AK299598 AY358820 AK222929 BX648017 CU688388 CR457243	158663	+	NM_001105519|C2orf70|339778|chromosome 2 open reading frame 70##AF183185|OTOF|9381|otoferlin##NM_194248|OTOF|9381|otoferlin##AF107403|OTOF|9381|otoferlin##AF183186|OTOF|9381|otoferlin##AF183187|OTOF|9381|otoferlin##NM_004802|OTOF|9381|otoferlin##NM_194322|OTOF|9381|otoferlin##NM_194323|OTOF|9381|otoferlin##BC140923|CIB4|130106|calcium and integrin binding family member 4##NM_001029881|CIB4|130106|calcium and integrin binding family member 4##BC127685|CIB4|130106|calcium and integrin binding family member 4##BC127684|CIB4|130106|calcium and integrin binding family member 4##BC140701|KCNK3|3777|potassium channel, subfamily K, member 3##NM_002246|KCNK3|3777|potassium channel, subfamily K, member 3##AF006823|KCNK3|3777|potassium channel, subfamily K, member 3##AF065163|KCNK3|3777|potassium channel, subfamily K, member 3##AK000562|C2orf18|54978|chromosome 2 open reading frame 18##NM_017877|C2orf18|54978|chromosome 2 open reading frame 18##BC028081|C2orf18|54978|chromosome 2 open reading frame 18##BC035519|C2orf18|54978|chromosome 2 open reading frame 18##BX647807|C2orf18|54978|chromosome 2 open reading frame 18##AK075164|C2orf18|54978|chromosome 2 open reading frame 18##AK296996|C2orf18|54978|chromosome 2 open reading frame 18##BC011013|CENPA|1058|centromere protein A##AK299598|C2orf18|54978|chromosome 2 open reading frame 18##AY358820|C2orf18|54978|chromosome 2 open reading frame 18##AK222929|C2orf18|54978|chromosome 2 open reading frame 18##BX648017|C2orf18|54978|chromosome 2 open reading frame 18##CR457243|C2orf18|54978|chromosome 2 open reading frame 18	1.045187	CTCF.p2:-7:0.998
chr5	127834673	127834816	reg1004440.p1	13.378	+	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	-415271	+	AK090949 AX746698 TSC_hg19_v1_chr5_-_127419417	-415385	-	TSC_hg19_v1_chr5_-_127418765 AF088062 BX648677 BC036629	-415981	-	TSC_hg19_v1_chr5_-_127873553 AK300440	38773	-	NM_001999 TSC_hg19_v1_chr5_-_127873939 AF193046	39097	-	TSC_hg19_v1_chr5_+_128300789 BC041945	466059	+	AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##AK090949|FLJ33630|644873|uncharacterized LOC644873##AF088062|FLJ33630|644873|uncharacterized LOC644873##BX648677|FLJ33630|644873|uncharacterized LOC644873##BC036629|FLJ33630|644873|uncharacterized LOC644873##AK300440|FBN2|2201|fibrillin 2##NM_001999|FBN2|2201|fibrillin 2##AF193046|FBN2|2201|fibrillin 2##BC041945|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6	0.806526	CTCF.p2:7:0.807
chr6	7992323	7992451	reg1004518.p1	13.377	+	TSC_hg19_v1_chr6_-_7911022 BC001199 AJ440721 AL833008 AY326464 AK075291 AK098089 AY358646 NM_030810	-81345	-	TSC_hg19_v1_chr6_-_7910300 AK315598 NM_001145549	-82058	-	NM_001718 M60315 BC096084 BC096085 BC099624 BC099625 BC111763 BC112352 BC113018 BC113019 BC128031	-265337	+	TSC_hg19_v1_chr6_-_8064623 BC052310 AK025442 BC032438 CR749569 BX647336 BC119645 BC119644	72214	-	TSC_hg19_v1_chr6_-_8064644 AK301142 AF426434 NM_001199322 NM_001199323 NM_201280	72273	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	110403	-	BC001199|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AJ440721|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AL833008|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AY326464|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AK075291|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AK098089|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AY358646|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##NM_030810|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AK315598|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##NM_001145549|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##NM_001718|BMP6|654|bone morphogenetic protein 6##M60315|BMP6|654|bone morphogenetic protein 6##BC096084|BMP6|654|bone morphogenetic protein 6##BC096085|BMP6|654|bone morphogenetic protein 6##BC099624|BMP6|654|bone morphogenetic protein 6##BC099625|BMP6|654|bone morphogenetic protein 6##BC111763|BMP6|654|bone morphogenetic protein 6##BC112352|BMP6|654|bone morphogenetic protein 6##BC113018|BMP6|654|bone morphogenetic protein 6##BC113019|BMP6|654|bone morphogenetic protein 6##BC128031|BMP6|654|bone morphogenetic protein 6##BC052310|MUTED-TXNDC5|100526836|MUTED-TXNDC5 readthrough (non-protein coding)##AK025442|MUTED|63915|muted homolog (mouse)##BC032438|MUTED|63915|muted homolog (mouse)##CR749569|MUTED|63915|muted homolog (mouse)##BX647336|MUTED|63915|muted homolog (mouse)##BC119645|MUTED|63915|muted homolog (mouse)##BC119644|MUTED|63915|muted homolog (mouse)##AK301142|MUTED|63915|muted homolog (mouse)##AF426434|MUTED|63915|muted homolog (mouse)##NM_001199322|MUTED|63915|muted homolog (mouse)##NM_001199323|MUTED|63915|muted homolog (mouse)##NM_201280|MUTED|63915|muted homolog (mouse)##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1	0.945402	CTCF.p2:21:0.945
chr17	54793349	54793493	reg1006286.p1	13.376	+	AK314080 NM_005450 TSC_hg19_v1_chr17_+_54671080	-122352	+	NM_153228 AK095654	-562585	+	TSC_hg19_v1_chr17_+_53828441 AF114430 NM_001102402 AK058120 BC005112	-964821	+	BC093905 BC093907 NM_001085430	99828	-	BC041467 TSC_hg19_v1_chr17_-_54911271	117852	-	TSC_hg19_v1_chr17_+_54911515 NM_003647 BC022297 AK310668 AK293039 U49379	118083	+	AK314080|NOG|9241|noggin##NM_005450|NOG|9241|noggin##NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AF114430|PCTP|58488|phosphatidylcholine transfer protein##NM_001102402|PCTP|58488|phosphatidylcholine transfer protein##AK058120|PCTP|58488|phosphatidylcholine transfer protein##BC005112|PCTP|58488|phosphatidylcholine transfer protein##BC093905|C17orf67|339210|chromosome 17 open reading frame 67##BC093907|C17orf67|339210|chromosome 17 open reading frame 67##NM_001085430|C17orf67|339210|chromosome 17 open reading frame 67##BC041467|C17orf67|339210|chromosome 17 open reading frame 67##NM_003647|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##BC022297|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##AK310668|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##AK293039|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##U49379|DGKE|8526|diacylglycerol kinase, epsilon 64kDa	0.997573	CTCF.p2:8:0.998
chr4	156708383	156708515	reg1006315.p1	13.376	+	TSC_hg19_v1_chr4_+_156680603 AK299916	-27843	+	NM_000857 TSC_hg19_v1_chr4_+_156680190 AK315944 AK300296 AK315199 AK296680 AK307838 BC026332 BC060835 BC047620 X66533 AF020340	-28245	+	TSC_hg19_v1_chr4_+_156588813 NM_001130684 BC028384	-119632	+	AB528059 AJ252011 NM_017419	78951	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	116428	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	166599	-	AK299916|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##NM_001130684|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC028384|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O	0.233656	CTCF.p2:11:0.234
chr5	72832766	72832896	reg1006152.p1	13.375	+	TSC_hg19_v1_chr5_+_72794276 BC061913 AB062126 BC008062 X74070 X53280 AB463433	-38449	+	TSC_hg19_v1_chr5_+_72794266 NM_001037637 NM_001207 AK310919 AK225964 AK291125	-38572	+	NM_004472 U59832 TSC_hg19_v1_chr5_-_72744463	-88422	-	TSC_hg19_v1_chr5_-_72861256 AK022876	28401	-	BC012917 TSC_hg19_v1_chr5_-_72861465 AF251051 NM_023039	28628	-	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	28751	+	BC061913|BTF3|689|basic transcription factor 3##AB062126|BTF3|689|basic transcription factor 3##BC008062|BTF3|689|basic transcription factor 3##X74070|BTF3|689|basic transcription factor 3##X53280|BTF3|689|basic transcription factor 3##NM_001037637|BTF3|689|basic transcription factor 3##NM_001207|BTF3|689|basic transcription factor 3##AK310919|BTF3|689|basic transcription factor 3##AK225964|BTF3|689|basic transcription factor 3##AK291125|BTF3|689|basic transcription factor 3##NM_004472|FOXD1|2297|forkhead box D1##U59832|FOXD1|2297|forkhead box D1##AK022876|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##BC012917|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AF251051|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##NM_023039|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)	0.995651	CTCF.p2:-11:0.996
chr9	111328161	111328279	reg1003857.p1	13.375	+	TSC_hg19_v1_chr9_-_110252048 NM_004235	-1076174	-	AF105036 AF022184 TSC_hg19_v1_chr9_-_110251847 U70663	-1076380	-	HM026463 CU688792 CU689020 DQ891793 DQ894975 AB385001 TSC_hg19_v1_chr9_-_110251402 BC030811 BC029923 AK313489	-1076772	-	CU689742 TSC_hg19_v1_chr9_-_111618267 BC033789 AK313871 NM_006686	290021	-	BC014610 AK314981 NM_006687	296353	+	BC033094 TSC_hg19_v1_chr9_-_111696232 CR749385 AK304742	368021	-	NM_004235|KLF4|9314|Kruppel-like factor 4 (gut)##AF105036|KLF4|9314|Kruppel-like factor 4 (gut)##AF022184|KLF4|9314|Kruppel-like factor 4 (gut)##U70663|KLF4|9314|Kruppel-like factor 4 (gut)##HM026463|KLF4|9314|Kruppel-like factor 4 (gut)##DQ891793|KLF4|9314|Kruppel-like factor 4 (gut)##DQ894975|KLF4|9314|Kruppel-like factor 4 (gut)##BC030811|KLF4|9314|Kruppel-like factor 4 (gut)##BC029923|KLF4|9314|Kruppel-like factor 4 (gut)##AK313489|KLF4|9314|Kruppel-like factor 4 (gut)##BC033789|ACTL7B|10880|actin-like 7B##AK313871|ACTL7B|10880|actin-like 7B##NM_006686|ACTL7B|10880|actin-like 7B##BC014610|ACTL7A|10881|actin-like 7A##AK314981|ACTL7A|10881|actin-like 7A##NM_006687|ACTL7A|10881|actin-like 7A##BC033094|IKBKAP|8518|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein##CR749385|IKBKAP|8518|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein##AK304742|IKBKAP|8518|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein	0.998663	CTCF.p2:15:0.999
chr1	168515307	168515433	reg1005445.p1	13.373	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	-2153	-	AJ010277 NM_005149 BC093664 BC093666 EU446671	-265068	+	TSC_hg19_v1_chr1_+_168195262 BC068098 CU686619	-320077	+	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	30422	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	183059	-	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	560599	+	BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##AJ010277|TBX19|9095|T-box 19##NM_005149|TBX19|9095|T-box 19##BC093664|TBX19|9095|T-box 19##BC093666|TBX19|9095|T-box 19##EU446671|TBX19|9095|T-box 19##BC068098|SFT2D2|375035|SFT2 domain containing 2##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide	0.986147	CTCF.p2:-4:0.986
chr3	63979416	63979534	reg1005681.p1	13.372	+	NM_001128149 AK310745 AK304062	-26018	+	NM_001177387	-95401	+	TSC_hg19_v1_chr3_+_63850212 AF032104 AF032105 NM_000333 AJ000517	-129267	+	AF530062 AB463196 TSC_hg19_v1_chr3_-_64009149 BC000630 AK095059 AY568086 D14663 NM_014814 BC012369 BC000904 AK290205 BX647742 AF215935	29675	-	BC119002 AL833539 NM_198859	231645	-	AK057923 TSC_hg19_v1_chr3_+_64670789 BC040632	691316	+	NM_001128149|ATXN7|6314|ataxin 7##AK310745|ATXN7|6314|ataxin 7##AK304062|ATXN7|6314|ataxin 7##NM_001177387|ATXN7|6314|ataxin 7##AF032104|ATXN7|6314|ataxin 7##AF032105|ATXN7|6314|ataxin 7##NM_000333|ATXN7|6314|ataxin 7##AJ000517|ATXN7|6314|ataxin 7##AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)##NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AK057923|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##BC040632|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)	0.971634	CTCF.p2:0:0.972
chr6	127786133	127786250	reg1004570.p1	13.372	+	NM_014702	-5657	-	TSC_hg19_v1_chr6_-_127664710 AL834469 BC003549 AF220192 NM_001002030 NM_001105544 NM_001105545 NM_018479	-121469	-	TSC_hg19_v1_chr6_+_127664573 AK055024	-121630	+	NM_001012279	54308	-	AK303850 BC062712 NM_001010905	112127	+	AK292046 AK097903 BC144034 BC130516 NM_001010923 NM_001164685	436009	-	NM_014702|KIAA0408|9729|KIAA0408##AL834469|ECHDC1|55862|enoyl CoA hydratase domain containing 1##BC003549|ECHDC1|55862|enoyl CoA hydratase domain containing 1##AF220192|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001002030|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001105544|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001105545|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_018479|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174##AK303850|C6orf58|352999|chromosome 6 open reading frame 58##BC062712|C6orf58|352999|chromosome 6 open reading frame 58##NM_001010905|C6orf58|352999|chromosome 6 open reading frame 58##AK292046|THEMIS|387357|thymocyte selection associated##AK097903|THEMIS|387357|thymocyte selection associated##BC144034|THEMIS|387357|thymocyte selection associated##BC130516|THEMIS|387357|thymocyte selection associated##NM_001010923|THEMIS|387357|thymocyte selection associated##NM_001164685|THEMIS|387357|thymocyte selection associated	0.231151	CTCF.p2:11:0.231
chr1	6423242	6423357	reg1005181.p1	13.371	+	AB074418 AK292202 NM_181865 AK304465	-2557	-	AB074419 AK291583 NM_181866	-4315	-	BC068275 NM_207370 TSC_hg19_v1_chr1_-_6321125	-102216	-	AK290097 AB074417 NM_181864	22510	-	BT006888 TSC_hg19_v1_chr1_-_6453439 AB074415 AB074416 D88894 AK289572 AK300831	30112	-	BC017365 AK057168 NM_007274	30500	-	AB074418|ACOT7|11332|acyl-CoA thioesterase 7##AK292202|ACOT7|11332|acyl-CoA thioesterase 7##NM_181865|ACOT7|11332|acyl-CoA thioesterase 7##AB074419|ACOT7|11332|acyl-CoA thioesterase 7##AK291583|ACOT7|11332|acyl-CoA thioesterase 7##NM_181866|ACOT7|11332|acyl-CoA thioesterase 7##BC068275|GPR153|387509|G protein-coupled receptor 153##NM_207370|GPR153|387509|G protein-coupled receptor 153##AK290097|ACOT7|11332|acyl-CoA thioesterase 7##AB074417|ACOT7|11332|acyl-CoA thioesterase 7##NM_181864|ACOT7|11332|acyl-CoA thioesterase 7##BT006888|ACOT7|11332|acyl-CoA thioesterase 7##AB074415|ACOT7|11332|acyl-CoA thioesterase 7##AB074416|ACOT7|11332|acyl-CoA thioesterase 7##D88894|ACOT7|11332|acyl-CoA thioesterase 7##AK289572|ACOT7|11332|acyl-CoA thioesterase 7##AK300831|ACOT7|11332|acyl-CoA thioesterase 7##BC017365|ACOT7|11332|acyl-CoA thioesterase 7##AK057168|ACOT7|11332|acyl-CoA thioesterase 7##NM_007274|ACOT7|11332|acyl-CoA thioesterase 7	0.830069	CTCF.p2:-9:0.830
chr5	102475109	102475224	reg1004537.p1	13.371	+	BC024591 NM_015216 AB463068	-9892	+	TSC_hg19_v1_chr5_+_102456089 AK294787	-19108	+	AK310544 AB007893 TSC_hg19_v1_chr5_+_102456004	-19185	+	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	119291	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	423315	-	AK308672 NM_001962 U26403	4531424	-	BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK294787|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AB007893|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5	0.918655	CTCF.p2:7:0.878
chr7	21296055	21296182	reg1004508.p1	13.371	+	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	-469584	-	TSC_hg19_v1_chr7_-_20826429 AK299947	-469690	-	TSC_hg19_v1_chr7_-_20825382 AB464710	-470736	-	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	171701	+	AB591008 TSC_hg19_v1_chr7_+_21468356	172206	+	AJ320497 NM_003777	286714	+	AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor##AK299947|SP8|221833|Sp8 transcription factor##AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11	0.996692	CTCF.p2:-24:0.997
chr20	50240897	50241024	reg1006145.p1	13.370	+	AK304147 AK226146 EU887575 EU887579 TSC_hg19_v1_chr20_-_50179379	-61576	-	EU887574 EU887577 NM_001136021	-61793	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	-81685	-	BC110591 BC110592 BC063701 TSC_hg19_v1_chr20_-_50314160	73118	-	TSC_hg19_v1_chr20_-_50384875 AB385363 AB014511 AK299064	143918	-	TSC_hg19_v1_chr20_-_50384925 NM_006045	143968	-	AK304147|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##AK226146|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887575|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887579|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC110591|ATP9A|10079|ATPase, class II, type 9A##BC110592|ATP9A|10079|ATPase, class II, type 9A##BC063701|ATP9A|10079|ATPase, class II, type 9A##AB014511|ATP9A|10079|ATPase, class II, type 9A##AK299064|ATP9A|10079|ATPase, class II, type 9A##NM_006045|ATP9A|10079|ATPase, class II, type 9A	0.961591	CTCF.p2:4:0.962
chr2	18701912	18702033	reg1005008.p1	13.369	+	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	-642018	+	NM_001105569	-704187	+	TSC_hg19_v1_chr2_+_17935407 CR936783 NM_001130009 AK093631 AX748233	-766561	+	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	39944	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	68838	-	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	856407	-	AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_001105569|MSGN1|343930|mesogenin 1##CR936783|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##NM_001130009|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK093631|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)	0.999347	CTCF.p2:2:0.999
chr2	223555432	223555551	reg1003771.p1	13.369	+	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	-19082	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	-34697	-	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	-266184	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	170256	+	NM_080671 TSC_hg19_v1_chr2_+_223916907 DQ192293 AK313203 BC014429 AY065987	361406	+	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	911575	-	AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_080671|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##DQ192293|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AK313203|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##BC014429|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AY065987|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II	1.599451	CTCF.p2:23:0.912	CTCF.p2:-28:0.687
chr20	17412523	17412641	reg1004090.p2	13.368	+	TSC_hg19_v1_chr20_+_17207684 BC005815 AK294200 AK312341 J05252 AB528512 DQ892675 DQ895917	-204767	+	BC001905 TSC_hg19_v1_chr20_+_17207673	-204911	+	NM_001201529 NM_002594 TSC_hg19_v1_chr20_+_17207617	-204972	+	AF039655 Y16717 TSC_hg19_v1_chr20_-_17512006 NM_001195	99410	-	AK316247 BC041483 NM_001161705	126960	-	NM_001011546 NM_006870 TSC_hg19_v1_chr20_+_17550756 AK315994 BC009477 AK312645 BX647319 S65738 AK302338	138157	+	BC005815|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK294200|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK312341|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##J05252|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##DQ892675|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##DQ895917|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201529|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AF039655|BFSP1|631|beaded filament structural protein 1, filensin##Y16717|BFSP1|631|beaded filament structural protein 1, filensin##NM_001195|BFSP1|631|beaded filament structural protein 1, filensin##AK316247|BFSP1|631|beaded filament structural protein 1, filensin##BC041483|BFSP1|631|beaded filament structural protein 1, filensin##NM_001161705|BFSP1|631|beaded filament structural protein 1, filensin##NM_001011546|DSTN|11034|destrin (actin depolymerizing factor)##NM_006870|DSTN|11034|destrin (actin depolymerizing factor)##AK315994|DSTN|11034|destrin (actin depolymerizing factor)##BC009477|DSTN|11034|destrin (actin depolymerizing factor)##AK312645|DSTN|11034|destrin (actin depolymerizing factor)##BX647319|DSTN|11034|destrin (actin depolymerizing factor)##S65738|DSTN|11034|destrin (actin depolymerizing factor)##AK302338|DSTN|11034|destrin (actin depolymerizing factor)	0.999172	CTCF.p2:1:0.999
chr2	75147019	75147126	reg1003273.p1	13.368	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-84821	-	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	-85812	+	AF086198 NM_000189	-87291	+	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	38713	+	AK289765 NM_001058 NM_015727	279556	-	BC016157 TSC_hg19_v1_chr2_-_75788066	640975	-	AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2##AF086198|HK2|3099|hexokinase 2##NM_000189|HK2|3099|hexokinase 2##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##BC016157|FAM176A|84141|family with sequence similarity 176, member A	0.986883	CTCF.p2:-16:0.987
chr15	40636879	40637008	reg1006304.p1	13.366	+	TSC_hg19_v1_chr15_-_40633122 AK125329 NM_207380	-3799	-	TSC_hg19_v1_chr15_-_40630272 BC140897 BC140902 AK126035	-6641	-	TSC_hg19_v1_chr15_-_40600137 AK291657 NM_004573	-36798	-	TSC_hg19_v1_chr15_+_40643233 NM_001145643 BC061640	6292	+	TSC_hg19_v1_chr15_+_40650431 NM_033510 AB051529 BC151833	13479	+	AK125765 AK301887 NM_001142761 NM_001142762 NM_033286 BC118559 BC118639 AY652615 TSC_hg19_v1_chr15_+_40675159 BC045739 BC107802 U81002 AK027408	38107	+	AK125329|C15orf52|388115|chromosome 15 open reading frame 52##NM_207380|C15orf52|388115|chromosome 15 open reading frame 52##BC140897|C15orf52|388115|chromosome 15 open reading frame 52##BC140902|C15orf52|388115|chromosome 15 open reading frame 52##AK126035|C15orf52|388115|chromosome 15 open reading frame 52##AK291657|PLCB2|5330|phospholipase C, beta 2##NM_004573|PLCB2|5330|phospholipase C, beta 2##NM_001145643|PHGR1|644844|proline/histidine/glycine-rich 1##BC061640|PHGR1|644844|proline/histidine/glycine-rich 1##NM_033510|DISP2|85455|dispatched homolog 2 (Drosophila)##AB051529|DISP2|85455|dispatched homolog 2 (Drosophila)##BC151833|DISP2|85455|dispatched homolog 2 (Drosophila)##AK125765|C15orf23|90417|chromosome 15 open reading frame 23##AK301887|C15orf23|90417|chromosome 15 open reading frame 23##NM_001142761|C15orf23|90417|chromosome 15 open reading frame 23##NM_001142762|C15orf23|90417|chromosome 15 open reading frame 23##NM_033286|C15orf23|90417|chromosome 15 open reading frame 23##BC118559|C15orf23|90417|chromosome 15 open reading frame 23##BC118639|C15orf23|90417|chromosome 15 open reading frame 23##AY652615|C15orf23|90417|chromosome 15 open reading frame 23##BC045739|C15orf23|90417|chromosome 15 open reading frame 23##BC107802|C15orf23|90417|chromosome 15 open reading frame 23##U81002|C15orf23|90417|chromosome 15 open reading frame 23##AK027408|C15orf23|90417|chromosome 15 open reading frame 23	0.890501	CTCF.p2:-10:0.891
chr16	74847123	74847260	reg1004088.p1	13.365	+	BC017049 TSC_hg19_v1_chr16_-_74808722 AK058016 AK303878 NM_024306	-38467	-	TSC_hg19_v1_chr16_-_74808693 AK315512 BC002679 BC004263	-38606	-	BC028141 AK091708 AX747141 NM_001142497 NM_152649	-112454	-	CU678744 TSC_hg19_v1_chr16_-_75018978 BC004519	171768	-	TSC_hg19_v1_chr16_-_75019011 NM_030581	171834	-	TSC_hg19_v1_chr16_+_75032911 NM_032268	185703	+	BC017049|FA2H|79152|fatty acid 2-hydroxylase##AK058016|FA2H|79152|fatty acid 2-hydroxylase##AK303878|FA2H|79152|fatty acid 2-hydroxylase##NM_024306|FA2H|79152|fatty acid 2-hydroxylase##AK315512|FA2H|79152|fatty acid 2-hydroxylase##BC002679|FA2H|79152|fatty acid 2-hydroxylase##BC004263|FA2H|79152|fatty acid 2-hydroxylase##BC028141|MLKL|197259|mixed lineage kinase domain-like##AK091708|MLKL|197259|mixed lineage kinase domain-like##NM_001142497|MLKL|197259|mixed lineage kinase domain-like##NM_152649|MLKL|197259|mixed lineage kinase domain-like##BC004519|WDR59|79726|WD repeat domain 59##NM_030581|WDR59|79726|WD repeat domain 59##NM_032268|ZNRF1|84937|zinc and ring finger 1	1.530111	CTCF.p2:-23:0.953	CTCF.p2:78:0.577
chr1	22968630	22968746	reg1004895.p1	13.363	+	TSC_hg19_v1_chr1_+_22963170 NM_015991 BC030153 AK311980 BC071986	-5549	+	TSC_hg19_v1_chr1_+_22889990 BC072417 NM_001006943 NM_020526 BC038796 AB527136	-78632	+	TSC_hg19_v1_chr1_+_22778350 AB007947 BC114607	-190262	+	NM_001114101 NM_172369 AK057792 TSC_hg19_v1_chr1_+_22970125 AF087892 AK226152 BC009016 AK130613	1499	+	NM_000491 TSC_hg19_v1_chr1_+_22979728 BC008983	11035	+	TSC_hg19_v1_chr1_+_23037331 NM_004442 NM_017449 AK299701 BC067861 AB210018 AF025304 CU686595 L36643	68735	+	NM_015991|C1QA|712|complement component 1, q subcomponent, A chain##BC030153|C1QA|712|complement component 1, q subcomponent, A chain##AK311980|C1QA|712|complement component 1, q subcomponent, A chain##BC071986|C1QA|712|complement component 1, q subcomponent, A chain##BC072417|EPHA8|2046|EPH receptor A8##NM_001006943|EPHA8|2046|EPH receptor A8##NM_020526|EPHA8|2046|EPH receptor A8##BC038796|EPHA8|2046|EPH receptor A8##AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40##BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_001114101|C1QC|714|complement component 1, q subcomponent, C chain##NM_172369|C1QC|714|complement component 1, q subcomponent, C chain##AK057792|C1QC|714|complement component 1, q subcomponent, C chain##AF087892|C1QC|714|complement component 1, q subcomponent, C chain##AK226152|C1QC|714|complement component 1, q subcomponent, C chain##BC009016|C1QC|714|complement component 1, q subcomponent, C chain##AK130613|C1QC|714|complement component 1, q subcomponent, C chain##NM_000491|C1QB|713|complement component 1, q subcomponent, B chain##BC008983|C1QB|713|complement component 1, q subcomponent, B chain##NM_004442|EPHB2|2048|EPH receptor B2##NM_017449|EPHB2|2048|EPH receptor B2##AK299701|EPHB2|2048|EPH receptor B2##BC067861|EPHB2|2048|EPH receptor B2##AB210018|EPHB2|2048|EPH receptor B2##AF025304|EPHB2|2048|EPH receptor B2##L36643|EPHB2|2048|EPH receptor B2	0.999615	CTCF.p2:12:1.000
chr1	67813498	67813633	reg1004309.p1	13.363	+	AK294494 TSC_hg19_v1_chr1_+_67773565 AK316525	-40002	+	NM_001559 U64198 TSC_hg19_v1_chr1_+_67773087	-40484	+	AF461422 NM_144701	-181397	+	CR457383 AB527591 CU675982 CU676556 CU677990 CU693242 EU831446 EU831638 EU831722 EU832650 EU832728 TSC_hg19_v1_chr1_-_67896065 BC003049 AK130606 BC002488 BC008045 BC017449 BC020555 BC026916 BC019273 AL080119 AF151813	82458	-	TSC_hg19_v1_chr1_-_67896070 AK074970 AK222955 AK223138	82507	-	TSC_hg19_v1_chr1_-_67896086 AK312256	82520	-	AK294494|IL12RB2|3595|interleukin 12 receptor, beta 2##AK316525|IL12RB2|3595|interleukin 12 receptor, beta 2##NM_001559|IL12RB2|3595|interleukin 12 receptor, beta 2##U64198|IL12RB2|3595|interleukin 12 receptor, beta 2##AF461422|IL23R|149233|interleukin 23 receptor##NM_144701|IL23R|149233|interleukin 23 receptor##CR457383|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831446|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831638|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831722|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832650|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832728|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC003049|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK130606|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC002488|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC008045|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC017449|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC020555|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC026916|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC019273|SERBP1|26135|SERPINE1 mRNA binding protein 1##AL080119|SERBP1|26135|SERPINE1 mRNA binding protein 1##AF151813|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK074970|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK222955|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK223138|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK312256|SERBP1|26135|SERPINE1 mRNA binding protein 1	0.999091	CTCF.p2:-8:0.999
chr14	106172418	106172530	reg1004489.p1	13.361	+	TSC_hg19_v1_chr14_-_106111114 AJ294731	-61358	-	BC040042 TSC_hg19_v1_chr14_-_106110945	-61551	-	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	-80138	-	TSC_hg19_v1_chr14_-_106174914 BC113815 AJ294729	2479	-	TSC_hg19_v1_chr14_-_106208542 AF487336	36075	-	AF150959 TSC_hg19_v1_chr14_-_106208714 S76144	36236	-	AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AJ294729|IGHA1|3493|immunoglobulin heavy constant alpha 1	1.007041	CTCF.p2:11:0.995
chr16	30420895	30421029	reg1004112.p1	13.361	+	TSC_hg19_v1_chr16_+_30419371 AF242768	-1543	+	TSC_hg19_v1_chr16_+_30418926 BC026192 AK311157 AK001405 BC011870	-1921	+	TSC_hg19_v1_chr16_+_30418616 AK313930 NM_001142305 NM_016643	-2307	+	CR457335 TSC_hg19_v1_chr16_-_30441339 AK024843 AF212242 AF210430 AY453409 BC001344 NM_024096	20377	-	BC016643 BC002381 U43286 TSC_hg19_v1_chr16_-_30457196 AK092003 AK303275 AX747304	36220	-	TSC_hg19_v1_chr16_-_30457197 AK093889 AX748354 NM_012248	36267	-	AF242768|ZNF771|51333|zinc finger protein 771##BC026192|ZNF771|51333|zinc finger protein 771##BC011870|ZNF771|51333|zinc finger protein 771##AK313930|ZNF771|51333|zinc finger protein 771##NM_001142305|ZNF771|51333|zinc finger protein 771##NM_016643|ZNF771|51333|zinc finger protein 771##CR457335|DCTPP1|79077|dCTP pyrophosphatase 1##AK024843|DCTPP1|79077|dCTP pyrophosphatase 1##AF212242|DCTPP1|79077|dCTP pyrophosphatase 1##AF210430|DCTPP1|79077|dCTP pyrophosphatase 1##AY453409|DCTPP1|79077|dCTP pyrophosphatase 1##BC001344|DCTPP1|79077|dCTP pyrophosphatase 1##NM_024096|DCTPP1|79077|dCTP pyrophosphatase 1##BC016643|SEPHS2|22928|selenophosphate synthetase 2##BC002381|SEPHS2|22928|selenophosphate synthetase 2##U43286|SEPHS2|22928|selenophosphate synthetase 2##AK092003|SEPHS2|22928|selenophosphate synthetase 2##AK303275|SEPHS2|22928|selenophosphate synthetase 2##AK093889|SEPHS2|22928|selenophosphate synthetase 2##NM_012248|SEPHS2|22928|selenophosphate synthetase 2	1.38115	CTCF.p2:9:0.998	CTCF.p2:-88:0.383
chr9	112820744	112820870	reg1004075.p2	13.361	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	-9844	+	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	-9898	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	-278192	+	NM_001136562 AK300427	66985	+	NM_001012993	149605	-	AF065241 AF276919 CR407665 AF313911 AY004872 AF085844 BC003377 J04026 BC054866 TSC_hg19_v1_chr9_-_113018788 X77584	197945	-	AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001012993|C9orf152|401546|chromosome 9 open reading frame 152##AF065241|TXN|7295|thioredoxin##AF276919|TXN|7295|thioredoxin##CR407665|TXN|7295|thioredoxin##AF313911|TXN|7295|thioredoxin##AY004872|TXN|7295|thioredoxin##AF085844|TXN|7295|thioredoxin##BC003377|TXN|7295|thioredoxin##J04026|TXN|7295|thioredoxin##BC054866|TXN|7295|thioredoxin##X77584|TXN|7295|thioredoxin	0.99158	CTCF.p2:14:0.992
chr10	116308615	116308733	reg1003834.p2	13.359	+	TSC_hg19_v1_chr10_-_116286673 CR749819 NM_006720 AK098277	-21995	-	TSC_hg19_v1_chr10_-_116286631 AK298709 BC002448	-22072	-	CU677968 TSC_hg19_v1_chr10_-_116251632	-57067	-	AK297344 TSC_hg19_v1_chr10_-_116392101	83426	-	AF005654 NM_002313	109382	-	AB462929 TSC_hg19_v1_chr10_-_116444183 D31883	135489	-	CR749819|ABLIM1|3983|actin binding LIM protein 1##NM_006720|ABLIM1|3983|actin binding LIM protein 1##AK098277|ABLIM1|3983|actin binding LIM protein 1##AK298709|ABLIM1|3983|actin binding LIM protein 1##BC002448|ABLIM1|3983|actin binding LIM protein 1##AK297344|ABLIM1|3983|actin binding LIM protein 1##AF005654|ABLIM1|3983|actin binding LIM protein 1##NM_002313|ABLIM1|3983|actin binding LIM protein 1##D31883|ABLIM1|3983|actin binding LIM protein 1	0.021249	
chr1	113250010	113250170	reg1004298.p1	13.359	+	TSC_hg19_v1_chr1_-_113250031 NM_001042678 NM_175744	-64	-	TSC_hg19_v1_chr1_-_113249750 AK094474	-342	-	NM_001042679 TSC_hg19_v1_chr1_-_113249723 BC052808 BC007245 BC009177 BX648784	-390	-	BC011803 BC064628 AL133644 AB527803 EU832164 EU832258 AK093270 AX748024 BC073828 NM_005167	7821	-	NM_001004440 NM_182759 BC112268 BC117479 BC143949 BC144042 BC144043 AY325116 AY325119	13103	+	BC045664 AK094064 NM_001166496 AF239919 AL162079 TSC_hg19_v1_chr1_-_113498818 AK296688 AK312500 BC026317	248627	-	NM_001042678|RHOC|389|ras homolog gene family, member C##NM_175744|RHOC|389|ras homolog gene family, member C##AK094474|RHOC|389|ras homolog gene family, member C##NM_001042679|RHOC|389|ras homolog gene family, member C##BC052808|RHOC|389|ras homolog gene family, member C##BC007245|RHOC|389|ras homolog gene family, member C##BC009177|RHOC|389|ras homolog gene family, member C##BX648784|RHOC|389|ras homolog gene family, member C##BC011803|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC064628|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AL133644|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832164|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832258|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AK093270|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC073828|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_005167|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_001004440|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##NM_182759|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC112268|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC117479|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC143949|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144042|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144043|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325116|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325119|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC045664|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK094064|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_001166496|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AF239919|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AL162079|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK296688|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK312500|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC026317|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)	0.993233	CTCF.p2:10:0.993
chr20	60876985	60877101	reg1003708.p1	13.359	+	TSC_hg19_v1_chr20_+_60813616 AB018315 AY028168 BC000296 BC004455 BC018812	-63422	+	TSC_hg19_v1_chr20_+_60813579 AF392447 AK000230 AK296595 AK315576 NM_014835 NM_144498	-63463	+	AK291851 TSC_hg19_v1_chr20_+_60813576	-63467	+	TSC_hg19_v1_chr20_+_60878021 AK307459	937	+	TSC_hg19_v1_chr20_+_60878032 NM_007002 NM_175573	992	+	TSC_hg19_v1_chr20_+_60878052 BC017245 BC093021 BC003059 AK297567 D64154	1017	+	AB018315|OSBPL2|9885|oxysterol binding protein-like 2##AY028168|OSBPL2|9885|oxysterol binding protein-like 2##BC000296|OSBPL2|9885|oxysterol binding protein-like 2##BC004455|OSBPL2|9885|oxysterol binding protein-like 2##BC018812|OSBPL2|9885|oxysterol binding protein-like 2##AF392447|OSBPL2|9885|oxysterol binding protein-like 2##AK000230|OSBPL2|9885|oxysterol binding protein-like 2##AK296595|OSBPL2|9885|oxysterol binding protein-like 2##AK315576|OSBPL2|9885|oxysterol binding protein-like 2##NM_014835|OSBPL2|9885|oxysterol binding protein-like 2##NM_144498|OSBPL2|9885|oxysterol binding protein-like 2##AK291851|OSBPL2|9885|oxysterol binding protein-like 2##AK307459|ADRM1|11047|adhesion regulating molecule 1##NM_007002|ADRM1|11047|adhesion regulating molecule 1##NM_175573|ADRM1|11047|adhesion regulating molecule 1##BC017245|ADRM1|11047|adhesion regulating molecule 1##BC093021|ADRM1|11047|adhesion regulating molecule 1##BC003059|ADRM1|11047|adhesion regulating molecule 1##AK297567|ADRM1|11047|adhesion regulating molecule 1##D64154|ADRM1|11047|adhesion regulating molecule 1	0.0	
chr1	18427091	18427228	reg1006181.p1	13.358	+	AK057339 NM_030812 BC028909 U20582	-345313	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	-482294	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	-520144	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	7118	+	NM_152375	380264	+	NM_001135254 NM_002584 NM_013945 X96743	530340	+	AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##NM_152375|KLHDC7A|127707|kelch domain containing 7A##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7	0.893635	CTCF.p2:5:0.894
chr18	39878841	39878967	reg1005083.p1	13.357	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-343671	+	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	-343705	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-2498636	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	816665	-	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	978525	-	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	2381210	+	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK090603|LOC647946|647946|uncharacterized LOC647946##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1	0.998724	CTCF.p2:0:0.999
chr5	75897435	75897549	reg1003848.p2	13.357	+	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	-198376	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-518221	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-884232	-	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	21653	-	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	114464	+	NM_005242 BC018130 TSC_hg19_v1_chr5_+_76114854 U34038	217360	+	AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor##NM_005242|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC018130|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##U34038|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1	0.966434	CTCF.p2:-7:0.966
chr15	70021630	70021768	reg1003715.p1	13.356	+	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-276478	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-314337	-	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	-314953	+	BC015421 TSC_hg19_v1_chr15_-_70341948	320210	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	368528	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	368544	-	NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.991029	CTCF.p2:-10:0.991
chr12	14817498	14817605	reg1004153.p2	13.354	+	NM_024829 TSC_hg19_v1_chr12_-_14720806	-96747	-	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	-96942	-	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	-279279	+	BC136544 BC136545 M73489 TSC_hg19_v1_chr12_-_14849534 S57551 AK310034 NM_004963	31934	-	AB527963 TSC_hg19_v1_chr12_-_14924064 AK311916 BC020884 NM_175054	106490	-	NM_177925 TSC_hg19_v1_chr12_+_14927302	109734	+	NM_024829|PLBD1|79887|phospholipase B domain containing 1##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##BC136544|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##BC136545|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##M73489|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##S57551|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##AK310034|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##NM_004963|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##BC020884|HIST4H4|121504|histone cluster 4, H4##NM_175054|HIST4H4|121504|histone cluster 4, H4##NM_177925|H2AFJ|55766|H2A histone family, member J	0.987392	CTCF.p2:3:0.987
chr1	246917306	246917451	reg1004991.p1	13.354	+	TSC_hg19_v1_chr1_+_246887713 AK075178 BC026185 CU693152 AF151807	-29721	+	NM_016002	-30001	+	TSC_hg19_v1_chr1_+_246729853 BX647629 AK074142	-187532	+	TSC_hg19_v1_chr1_-_247054277 AL833491	136917	-	AK057394 AY157619 AB059277 NM_015446	177314	-	BC023527 AF242519 TSC_hg19_v1_chr1_-_247171319	253934	-	AK075178|SCCPDH|51097|saccharopine dehydrogenase (putative)##BC026185|SCCPDH|51097|saccharopine dehydrogenase (putative)##AF151807|SCCPDH|51097|saccharopine dehydrogenase (putative)##NM_016002|SCCPDH|51097|saccharopine dehydrogenase (putative)##BX647629|CNST|163882|consortin, connexin sorting protein##AK074142|CNST|163882|consortin, connexin sorting protein##AL833491|AHCTF1|25909|AT hook containing transcription factor 1##AK057394|AHCTF1P1|285116|AT hook containing transcription factor 1 pseudogene 1##AY157619|AHCTF1|25909|AT hook containing transcription factor 1##AB059277|AHCTF1|25909|AT hook containing transcription factor 1##NM_015446|AHCTF1|25909|AT hook containing transcription factor 1##BC023527|ZNF695|57116|zinc finger protein 695	0.868423	CTCF.p2:26:0.868
chr15	85833078	85833207	reg1005121.p1	13.354	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-166824	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-307816	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-307905	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	90749	+	AF127481 NM_144767	387125	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	504955	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	0.040859	
chr4	110926762	110926883	reg1004199.p1	13.354	+	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-92775	+	AK126648 NM_198506	-154337	+	NM_006583 BC128120 BC128121 BC128401	-177669	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	192963	-	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	470551	+	AK313987 TSC_hg19_v1_chr4_-_111543909	617088	-	AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK126648|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_198506|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313987|PITX2|5308|paired-like homeodomain 2	0.978457	CTCF.p2:-18:0.978
chr3	124000685	124000818	reg1006402.p1	13.353	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-187146	+	AF303889 NM_017578	-290553	-	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	-320496	-	TSC_hg19_v1_chr3_+_124103674 AK131379	102872	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	302777	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	448488	+	AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14##AK131379|KALRN|8997|kalirin, RhoGEF kinase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase	0.178791	
chr3	129209163	129209290	reg1005652.p1	13.353	+	TSC_hg19_v1_chr3_+_129159160 AK298526 AK299903 CU678342 EU832629 EU832704	-50064	+	BC028353 TSC_hg19_v1_chr3_+_129159138	-50088	+	TSC_hg19_v1_chr3_+_129159089 AF302154	-50114	+	NM_000539 BX537381 BC112104 BC112106 AB464154 AM392780	38301	+	AY158091 NM_153833	52830	+	TSC_hg19_v1_chr3_-_129325518 NM_015103 AB014520 AY116661 BC150280	116213	-	AK298526|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)##AK299903|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)##EU832629|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)##EU832704|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)##BC028353|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)##AF302154|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)##NM_000539|RHO|6010|rhodopsin##BX537381|RHO|6010|rhodopsin##BC112104|RHO|6010|rhodopsin##BC112106|RHO|6010|rhodopsin##AM392780|RHO|6010|rhodopsin##AY158091|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_153833|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_015103|PLXND1|23129|plexin D1##AB014520|PLXND1|23129|plexin D1##AY116661|PLXND1|23129|plexin D1##BC150280|PLXND1|23129|plexin D1	1.315537	CTCF.p2:-10:0.989	CTCF.p2:68:0.326
chr9	32251574	32251687	reg1004357.p1	13.353	+	AK056372 NM_152570	-3532328	-	AK057806 JN681271 NM_145005	-4677789	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-4678159	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	132960	+	TSC_hg19_v1_chr9_+_32384622 AK057904	132997	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	133019	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.996821	CTCF.p2:2:0.997
chr15	64359840	64359960	reg1003781.p1	13.352	+	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	-21290	-	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-233760	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-233780	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	26197	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	28240	+	TSC_hg19_v1_chr15_+_64388200 AK310618 BC000357 AK222793 AB528736 AF065483 AF065484 BT006983 DQ890751 DQ893918	28306	+	AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1##AK310618|SNX1|6642|sorting nexin 1##BC000357|SNX1|6642|sorting nexin 1##AK222793|SNX1|6642|sorting nexin 1##AF065483|SNX1|6642|sorting nexin 1##AF065484|SNX1|6642|sorting nexin 1##BT006983|SNX1|6642|sorting nexin 1##DQ890751|SNX1|6642|sorting nexin 1##DQ893918|SNX1|6642|sorting nexin 1	0.991525	CTCF.p2:13:0.992
chr3	194193153	194193278	reg1005700.p1	13.351	+	NM_024524	-4248	-	NM_004488	-73221	-	BC101064 BC101065 TSC_hg19_v1_chr3_-_194090471 AK125112 NM_001135057 NM_130830	-102748	-	TSC_hg19_v1_chr3_+_194207865 AK091527	14587	+	TSC_hg19_v1_chr3_+_194304750 AK124168	111518	+	BX647418 TSC_hg19_v1_chr3_-_194353941 HQ258241	160711	-	NM_024524|ATP13A3|79572|ATPase type 13A3##NM_004488|GP5|2814|glycoprotein V (platelet)##BC101064|LRRC15|131578|leucine rich repeat containing 15##BC101065|LRRC15|131578|leucine rich repeat containing 15##AK125112|LRRC15|131578|leucine rich repeat containing 15##NM_001135057|LRRC15|131578|leucine rich repeat containing 15##NM_130830|LRRC15|131578|leucine rich repeat containing 15##AK091527|FLJ34208|401106|uncharacterized LOC401106##BX647418|TMEM44|93109|transmembrane protein 44##HQ258241|TMEM44|93109|transmembrane protein 44	0.012944	
chr9	94902694	94902832	reg1006260.p1	13.351	+	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	-25099	-	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	-190374	-	TSC_hg19_v1_chr9_-_94711095 BC033697	-191635	-	TSC_hg19_v1_chr9_-_95055945 AB209234 D28473 AK293014	153175	-	U04953 TSC_hg19_v1_chr9_-_95055976 BX647236 AK308202 BX647430 NM_013417 BX537417 BX537429 BX538109 BX647071 BX648567	153212	-	TSC_hg19_v1_chr9_-_95055986 AK301272	153223	-	AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##AB209234|IARS|3376|isoleucyl-tRNA synthetase##D28473|IARS|3376|isoleucyl-tRNA synthetase##AK293014|IARS|3376|isoleucyl-tRNA synthetase##U04953|IARS|3376|isoleucyl-tRNA synthetase##BX647236|IARS|3376|isoleucyl-tRNA synthetase##AK308202|IARS|3376|isoleucyl-tRNA synthetase##BX647430|IARS|3376|isoleucyl-tRNA synthetase##NM_013417|IARS|3376|isoleucyl-tRNA synthetase##BX537417|IARS|3376|isoleucyl-tRNA synthetase##BX537429|IARS|3376|isoleucyl-tRNA synthetase##BX538109|IARS|3376|isoleucyl-tRNA synthetase##BX647071|IARS|3376|isoleucyl-tRNA synthetase##BX648567|IARS|3376|isoleucyl-tRNA synthetase##AK301272|IARS|3376|isoleucyl-tRNA synthetase	0.998898	CTCF.p2:-15:0.999
chr16	66512712	66512852	reg1006879.p1	13.350	+	NM_001136106 NM_001178020 NM_001197224 NM_001197225 TSC_hg19_v1_chr16_+_66460907	-51921	+	AK300461 TSC_hg19_v1_chr16_+_66400593 X59796 AK300299 AB209908 AB035304 BC096363 BC096364 BC096365 BC117520	-112180	+	TSC_hg19_v1_chr16_+_66400559 U84722	-112222	+	AB472397 TSC_hg19_v1_chr16_-_66551118	38329	-	TSC_hg19_v1_chr16_-_66583778 U80628 AK302976	70901	-	TSC_hg19_v1_chr16_-_66584026 AK294627 AK295808 AK316226	71210	-	NM_001136106|BEAN1|146227|brain expressed, associated with NEDD4, 1##NM_001178020|BEAN1|146227|brain expressed, associated with NEDD4, 1##NM_001197224|BEAN1|146227|brain expressed, associated with NEDD4, 1##NM_001197225|BEAN1|146227|brain expressed, associated with NEDD4, 1##AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB472397|TK2|7084|thymidine kinase 2, mitochondrial##U80628|TK2|7084|thymidine kinase 2, mitochondrial##AK302976|TK2|7084|thymidine kinase 2, mitochondrial##AK294627|TK2|7084|thymidine kinase 2, mitochondrial##AK295808|TK2|7084|thymidine kinase 2, mitochondrial##AK316226|TK2|7084|thymidine kinase 2, mitochondrial	0.999412	CTCF.p2:8:0.999
chr1	210033774	210033882	reg1004292.p1	13.349	+	BX648514 CU692760 TSC_hg19_v1_chr1_+_210001421	-32418	+	TSC_hg19_v1_chr1_+_210001363 CR749825	-32459	+	BC022964 TSC_hg19_v1_chr1_+_210001361	-32472	+	NM_001146261 NM_001146262 NM_001146264 NM_153262 TSC_hg19_v1_chr1_+_210111559	77722	+	AJ617623 TSC_hg19_v1_chr1_+_210111595 AK091517 AX747035 BC130323 BC144154 BC144155 BC144157 AJ617625	77761	+	BC012083 NM_019605 AK096381	372383	+	BX648514|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##CR749825|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##BC022964|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##NM_001146261|SYT14|255928|synaptotagmin XIV##NM_001146262|SYT14|255928|synaptotagmin XIV##NM_001146264|SYT14|255928|synaptotagmin XIV##NM_153262|SYT14|255928|synaptotagmin XIV##AJ617623|SYT14|255928|synaptotagmin XIV##AK091517|SYT14|255928|synaptotagmin XIV##BC130323|SYT14|255928|synaptotagmin XIV##BC144154|SYT14|255928|synaptotagmin XIV##BC144155|SYT14|255928|synaptotagmin XIV##BC144157|SYT14|255928|synaptotagmin XIV##AJ617625|SYT14|255928|synaptotagmin XIV##BC012083|SERTAD4|56256|SERTA domain containing 4##NM_019605|SERTAD4|56256|SERTA domain containing 4##AK096381|SERTAD4|56256|SERTA domain containing 4	0.986595	CTCF.p2:4:0.987
chr12	51925817	51925919	reg1003850.p1	13.349	+	TSC_hg19_v1_chr12_+_51818698 BC025994 AF069512 AF107099 CU693092 AL831915	-107084	+	AK299545 TSC_hg19_v1_chr12_+_51818596 NM_001039960 NM_004858 DQ063579	-107270	+	TSC_hg19_v1_chr12_+_51785519 AK128321	-140347	+	TSC_hg19_v1_chr12_+_51985016 AB027567 NM_014191	59149	+	NM_001177984 AF225988 FJ611941	130706	+	AK129980 NM_001013690	299832	-	BC025994|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AF069512|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AF107099|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AL831915|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AK299545|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##NM_001039960|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##NM_004858|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ063579|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AK128321|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AB027567|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##NM_014191|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##AK129980|FIGNL2|401720|fidgetin-like 2##NM_001013690|FIGNL2|401720|fidgetin-like 2	0.99128	CTCF.p2:11:0.991
chr3	149902065	149902179	reg1003407.p1	13.349	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-213042	+	TSC_hg19_v1_chr3_-_149688960 BC043646	-213193	-	TSC_hg19_v1_chr3_-_149688683 AB464068 AF228738 EU832616 EU832688 AK311782 L10678 BC002964 BC095444 AK307227 AK311780 BC018049 AK297915 NM_002628 NM_053024	-213426	-	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	223950	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	224641	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	361848	-	BC012363|LOC646903|646903|uncharacterized LOC646903##BC043646|PFN2|5217|profilin 2##AF228738|PFN2|5217|profilin 2##EU832616|PFN2|5217|profilin 2##EU832688|PFN2|5217|profilin 2##AK311782|PFN2|5217|profilin 2##L10678|PFN2|5217|profilin 2##BC002964|PFN2|5217|profilin 2##BC095444|PFN2|5217|profilin 2##AK307227|PFN2|5217|profilin 2##AK311780|PFN2|5217|profilin 2##BC018049|PFN2|5217|profilin 2##AK297915|PFN2|5217|profilin 2##NM_002628|PFN2|5217|profilin 2##NM_053024|PFN2|5217|profilin 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.036088	
chr7	150808269	150808378	reg1003959.p2	13.349	+	TSC_hg19_v1_chr7_+_150783865 AF359283 NM_001042535 NM_031946 BC069236 AF413079 AB209781	-24404	+	TSC_hg19_v1_chr7_+_150782953 AK055393	-25382	+	TSC_hg19_v1_chr7_-_150780616 AY037155 BC000936 NM_001136044	-27719	-	TSC_hg19_v1_chr7_+_150811722 BC044644 EU831441 EU831533	3464	+	NM_001098834	56543	-	AF417920 NM_001142459 NM_001142460	76154	-	AF359283|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##NM_001042535|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##NM_031946|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##BC069236|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AF413079|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AB209781|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AK055393|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AY037155|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1##BC000936|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1##NM_001136044|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1##BC044644|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##EU831441|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##EU831533|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##NM_001098834|GBX1|2636|gastrulation brain homeobox 1##AF417920|ASB10|136371|ankyrin repeat and SOCS box containing 10##NM_001142459|ASB10|136371|ankyrin repeat and SOCS box containing 10##NM_001142460|ASB10|136371|ankyrin repeat and SOCS box containing 10	0.998928	CTCF.p2:0:0.999
chr12	12480856	12480985	reg1005569.p1	13.348	+	BC117136 BC126405 BC143725 AF074264 NM_002336 TSC_hg19_v1_chr12_-_12419947	-61078	-	AK074543 TSC_hg19_v1_chr12_-_12291395	-189536	-	AF281254 AF281255 NM_030766 NM_138722	-256519	+	AY358563 TSC_hg19_v1_chr12_-_12503210 AK023622 NM_018050 AK001160 BC032998	22252	-	TSC_hg19_v1_chr12_+_12510051 NM_058169 AK075028 BC013668 AY037865 AY037866 DQ891778 DQ894962 CU680646	29245	+	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	234480	-	BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6##BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6##BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6##AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6##NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AY358563|MANSC1|54682|MANSC domain containing 1##AK023622|MANSC1|54682|MANSC domain containing 1##NM_018050|MANSC1|54682|MANSC domain containing 1##AK001160|MANSC1|54682|MANSC domain containing 1##BC032998|MANSC1|54682|MANSC domain containing 1##NM_058169|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AK075028|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##BC013668|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037865|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037866|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ891778|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ894962|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16	0.971383	CTCF.p2:11:0.971
chr13	113929748	113929870	reg1003928.p2	13.348	+	TSC_hg19_v1_chr13_+_113863926 BC008308 NM_001008895 AB590820 AB178950 AY365124	-65875	+	TSC_hg19_v1_chr13_+_113863089 AL833355 NM_003589 AF077188	-66708	+	TSC_hg19_v1_chr13_-_113862984 CU677649 AK001302 BC031246 AK309321 AF183426 BC016614 AK023313 AK002167 AK289462 AK001185 AK000888 NM_001127202 NM_001127203 NM_018386	-66823	-	TSC_hg19_v1_chr13_+_113951509 NM_005561	21678	+	TSC_hg19_v1_chr13_+_113951553 AK092398 BC025335	21737	+	TSC_hg19_v1_chr13_+_113951612 BC093044 BC021288 AK301584 AB463850 DQ892614 DQ895854	21879	+	BC008308|CUL4A|8451|cullin 4A##NM_001008895|CUL4A|8451|cullin 4A##AB178950|CUL4A|8451|cullin 4A##AY365124|CUL4A|8451|cullin 4A##AL833355|CUL4A|8451|cullin 4A##NM_003589|CUL4A|8451|cullin 4A##AF077188|CUL4A|8451|cullin 4A##AK001302|PCID2|55795|PCI domain containing 2##BC031246|PCID2|55795|PCI domain containing 2##AK309321|PCID2|55795|PCI domain containing 2##AF183426|PCID2|55795|PCI domain containing 2##BC016614|PCID2|55795|PCI domain containing 2##AK023313|PCID2|55795|PCI domain containing 2##AK002167|PCID2|55795|PCI domain containing 2##AK289462|PCID2|55795|PCI domain containing 2##AK001185|PCID2|55795|PCI domain containing 2##AK000888|PCID2|55795|PCI domain containing 2##NM_001127202|PCID2|55795|PCI domain containing 2##NM_001127203|PCID2|55795|PCI domain containing 2##NM_018386|PCID2|55795|PCI domain containing 2##NM_005561|LAMP1|3916|lysosomal-associated membrane protein 1##AK092398|LAMP1|3916|lysosomal-associated membrane protein 1##BC025335|LAMP1|3916|lysosomal-associated membrane protein 1##BC093044|LAMP1|3916|lysosomal-associated membrane protein 1##BC021288|LAMP1|3916|lysosomal-associated membrane protein 1##AK301584|LAMP1|3916|lysosomal-associated membrane protein 1##DQ892614|LAMP1|3916|lysosomal-associated membrane protein 1##DQ895854|LAMP1|3916|lysosomal-associated membrane protein 1	0.973885	CTCF.p2:-10:0.974
chr13	26646673	26646793	reg1004960.p1	13.348	+	BC132898 BC137092 AY358775 NM_001007538	-21553	-	AK302980 TSC_hg19_v1_chr13_+_26042965	-603768	+	TSC_hg19_v1_chr13_+_26042926 AK126031	-603804	+	AL133621 TSC_hg19_v1_chr13_-_26789203	142402	-	TSC_hg19_v1_chr13_-_26795853 AY009109 NM_183044	149124	-	BC034688 TSC_hg19_v1_chr13_-_26795942 AK293272 AJ010347 NM_183043	149244	-	BC132898|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##BC137092|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AY358775|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##NM_001007538|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AK302980|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK126031|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AL133621|RNF6|6049|ring finger protein (C3H2C3 type) 6##AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6##BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6##AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6##AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6	0.789327	CTCF.p2:-6:0.789
chr18	56435796	56435921	reg1005339.p1	13.348	+	TSC_hg19_v1_chr18_+_56338830 AB528440 DQ892319 DQ895521	-97013	+	TSC_hg19_v1_chr18_+_56338790 AB026118	-97061	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	-97130	+	NM_018181 AF295077 BC130618 BC130620	94261	+	TSC_hg19_v1_chr18_+_56530714 AB046849	94997	+	TSC_hg19_v1_chr18_+_56531281 BC036366	95491	+	DQ892319|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##DQ895521|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AB026118|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_018181|ZNF532|55205|zinc finger protein 532##AF295077|ZNF532|55205|zinc finger protein 532##BC130618|ZNF532|55205|zinc finger protein 532##BC130620|ZNF532|55205|zinc finger protein 532##AB046849|ZNF532|55205|zinc finger protein 532##BC036366|ZNF532|55205|zinc finger protein 532	0.999074	CTCF.p2:-21:0.999
chr5	76440499	76440621	reg1004718.p1	13.346	+	AK098256 TSC_hg19_v1_chr5_+_76435100	-5474	+	TSC_hg19_v1_chr5_-_76383029 BC007239 NM_032367 AK223624	-57517	-	TSC_hg19_v1_chr5_+_76382539 AK311179	-58036	+	AF079529 AY129948 AY129949 NM_001029851 NM_001029852 NM_001029853 NM_001029854 NM_003719 AB085824 AB085825 AB085826 AB085827 AL831924	66230	+	TSC_hg19_v1_chr5_-_76788048 AK293316 AK295249 CU691838 AK304329 AK023977 AF115511 BC040241	347506	-	AK296423 AK300058 TSC_hg19_v1_chr5_-_76788142 AK021855	347585	-	BC007239|ZBED3|84327|zinc finger, BED-type containing 3##NM_032367|ZBED3|84327|zinc finger, BED-type containing 3##AK223624|ZBED3|84327|zinc finger, BED-type containing 3##AK311179|LOC728723|728723|uncharacterized LOC728723##AF079529|PDE8B|8622|phosphodiesterase 8B##AY129948|PDE8B|8622|phosphodiesterase 8B##AY129949|PDE8B|8622|phosphodiesterase 8B##NM_001029851|PDE8B|8622|phosphodiesterase 8B##NM_001029852|PDE8B|8622|phosphodiesterase 8B##NM_001029853|PDE8B|8622|phosphodiesterase 8B##NM_001029854|PDE8B|8622|phosphodiesterase 8B##NM_003719|PDE8B|8622|phosphodiesterase 8B##AB085824|PDE8B|8622|phosphodiesterase 8B##AB085825|PDE8B|8622|phosphodiesterase 8B##AB085826|PDE8B|8622|phosphodiesterase 8B##AB085827|PDE8B|8622|phosphodiesterase 8B##AL831924|PDE8B|8622|phosphodiesterase 8B##AK293316|WDR41|55255|WD repeat domain 41##AK295249|WDR41|55255|WD repeat domain 41##AK304329|WDR41|55255|WD repeat domain 41##AK023977|WDR41|55255|WD repeat domain 41##AF115511|WDR41|55255|WD repeat domain 41##BC040241|WDR41|55255|WD repeat domain 41##AK296423|WDR41|55255|WD repeat domain 41##AK300058|WDR41|55255|WD repeat domain 41##AK021855|WDR41|55255|WD repeat domain 41	0.537882	CTCF.p2:-20:0.538
chr7	5744202	5744340	reg1006167.p1	13.346	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	-111761	+	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	-111833	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-174062	-	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	76951	-	BC004947 TSC_hg19_v1_chr7_-_5821284 AK297231 BC063825 AK092767 AX747717 AK297416 BX537406 NM_207111 NM_207116 AK292396	77038	-	TSC_hg19_v1_chr7_+_5862791 AK291169 AK096288	118514	+	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216##BC004947|RNF216|54476|ring finger protein 216##AK297231|RNF216|54476|ring finger protein 216##BC063825|RNF216|54476|ring finger protein 216##AK092767|RNF216|54476|ring finger protein 216##AK297416|RNF216|54476|ring finger protein 216##BX537406|RNF216|54476|ring finger protein 216##NM_207111|RNF216|54476|ring finger protein 216##NM_207116|RNF216|54476|ring finger protein 216##AK292396|RNF216|54476|ring finger protein 216##AK291169|ZNF815|401303|zinc finger protein 815##AK096288|ZNF815|401303|zinc finger protein 815	0.999121	CTCF.p2:14:0.999
chr1	55416468	55416592	reg1004328.p2	13.345	+	NM_014762 TSC_hg19_v1_chr1_-_55352925	-63598	-	TSC_hg19_v1_chr1_-_55352904 D13643	-63632	-	TSC_hg19_v1_chr1_-_55352884 AF261758	-63645	-	BC029775 NM_182532	29934	+	AK129999 AY034632 NM_057176 BC103898 BC103899 BC103900	48091	+	NM_174936 TSC_hg19_v1_chr1_+_55505192	88640	+	NM_014762|DHCR24|1718|24-dehydrocholesterol reductase##D13643|DHCR24|1718|24-dehydrocholesterol reductase##AF261758|DHCR24|1718|24-dehydrocholesterol reductase##BC029775|TMEM61|199964|transmembrane protein 61##NM_182532|TMEM61|199964|transmembrane protein 61##AK129999|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##AY034632|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_057176|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103898|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103899|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103900|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_174936|PCSK9|255738|proprotein convertase subtilisin/kexin type 9	0.967409	CTCF.p2:-9:0.967
chr8	18422537	18422658	reg1005530.p1	13.344	+	D90042 NM_000015 BC067218 BC015878 D90040 AJ581144	-173809	+	AJ581141 NM_001160174	-343421	+	AJ581152 NM_000662 NM_001160170 NM_001160171 NM_001160172 NM_001160173 NM_001160175 NM_001160176 BC047666 BX647521 BC013732 AJ581135 TSC_hg19_v1_chr8_+_18067655	-354963	+	EU832144 EU832237 AK296546 BX647320 BX647406 TSC_hg19_v1_chr8_-_18541614	118935	-	AB463178 BC045112 AB023159 NM_206909	243752	-	GU727648 TSC_hg19_v1_chr8_-_18871128	448515	-	D90042|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##NM_000015|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC067218|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC015878|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##D90040|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##AJ581144|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##AJ581141|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160174|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##AJ581152|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_000662|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160170|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160171|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160172|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160173|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160175|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160176|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BC047666|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BX647521|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BC013732|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##AJ581135|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3##EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3##AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3##BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3##AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3##GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3	0.729114	CTCF.p2:6:0.729
chr17	57598964	57599107	reg1005861.p1	13.341	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	-190017	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	-301137	+	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	-311638	+	AF461690 NM_001166301 NM_024612 TSC_hg19_v1_chr17_+_57642970 BC024187 AK299151 AK095681 AF260270 AK226048 AB384723 DQ890909 DQ894060	43952	+	TSC_hg19_v1_chr17_+_57697037 NM_004859	98010	+	TSC_hg19_v1_chr17_+_57697265 BC054489 BX640615	98235	+	NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)##NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_004859|CLTC|1213|clathrin, heavy chain (Hc)##BC054489|CLTC|1213|clathrin, heavy chain (Hc)##BX640615|CLTC|1213|clathrin, heavy chain (Hc)	0.983933	CTCF.p2:0:0.984
chr6	10954882	10955000	reg1002969.p1	13.341	+	AK128130 NM_001040274	-67878	+	AF091149 BC069603 AF079550 BC117316 BC117318 NM_004752	-72862	-	AK314408 AB593146 AK097831 AK310329 TSC_hg19_v1_chr6_-_10838761 BC033002 NM_001242385 NM_001242957 NM_005906	-116192	-	TSC_hg19_v1_chr6_-_11044539 AK000341 BC060809 BC050278 NM_017770	89639	-	TSC_hg19_v1_chr6_+_11094066 AK058186	139116	+	BC032356 NM_001135575 TSC_hg19_v1_chr6_+_11094342	139362	+	AK128130|SYCP2L|221711|synaptonemal complex protein 2-like##NM_001040274|SYCP2L|221711|synaptonemal complex protein 2-like##AF091149|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC069603|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AF079550|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117316|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117318|GCM2|9247|glial cells missing homolog 2 (Drosophila)##NM_004752|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AK314408|MAK|4117|male germ cell-associated kinase##AB593146|MAK|4117|male germ cell-associated kinase##AK097831|MAK|4117|male germ cell-associated kinase##AK310329|MAK|4117|male germ cell-associated kinase##BC033002|MAK|4117|male germ cell-associated kinase##NM_001242385|MAK|4117|male germ cell-associated kinase##NM_001242957|MAK|4117|male germ cell-associated kinase##NM_005906|MAK|4117|male germ cell-associated kinase##AK000341|ELOVL2|54898|ELOVL fatty acid elongase 2##BC060809|ELOVL2|54898|ELOVL fatty acid elongase 2##BC050278|ELOVL2|54898|ELOVL fatty acid elongase 2##NM_017770|ELOVL2|54898|ELOVL fatty acid elongase 2##AK058186|C6orf228|221710|chromosome 6 open reading frame 228##BC032356|C6orf228|221710|chromosome 6 open reading frame 228##NM_001135575|C6orf228|221710|chromosome 6 open reading frame 228	0.994973	CTCF.p2:5:0.995
chr19	6738584	6738712	reg1004503.p2	13.339	+	TSC_hg19_v1_chr19_-_6737615 BC146909 AX775899 NM_001080452	-1030	-	TSC_hg19_v1_chr19_-_6737592 AK291968	-1053	-	AL365404 TSC_hg19_v1_chr19_-_6737583	-1073	-	TSC_hg19_v1_chr19_+_6739712 NM_004240 AK313296 AB007845 AB072596 AK223109 AF502289 AJ000414 AY081141 BC013002 CU680464 DQ892747 DQ895993 AF380114 BT006698 BT020167 BT020171 CR536513	1086	+	TSC_hg19_v1_chr19_-_6767447 AK225386 AK292781 AK299406 AK310659 BC006281 AF124249 AY358406 NM_005490 AK290293	28859	-	TSC_hg19_v1_chr19_+_6772718 NM_005428 AK225710 AK313307	34076	+	BC146909|GPR108|56927|G protein-coupled receptor 108##AX775899|GPR108|56927|G protein-coupled receptor 108##NM_001080452|GPR108|56927|G protein-coupled receptor 108##AK291968|GPR108|56927|G protein-coupled receptor 108##AL365404|GPR108|56927|G protein-coupled receptor 108##NM_004240|TRIP10|9322|thyroid hormone receptor interactor 10##AK313296|TRIP10|9322|thyroid hormone receptor interactor 10##AB007845|TRIP10|9322|thyroid hormone receptor interactor 10##AB072596|TRIP10|9322|thyroid hormone receptor interactor 10##AK223109|TRIP10|9322|thyroid hormone receptor interactor 10##AF502289|TRIP10|9322|thyroid hormone receptor interactor 10##AJ000414|TRIP10|9322|thyroid hormone receptor interactor 10##AY081141|TRIP10|9322|thyroid hormone receptor interactor 10##BC013002|TRIP10|9322|thyroid hormone receptor interactor 10##DQ892747|TRIP10|9322|thyroid hormone receptor interactor 10##DQ895993|TRIP10|9322|thyroid hormone receptor interactor 10##AF380114|TRIP10|9322|thyroid hormone receptor interactor 10##BT006698|TRIP10|9322|thyroid hormone receptor interactor 10##BT020167|TRIP10|9322|thyroid hormone receptor interactor 10##BT020171|TRIP10|9322|thyroid hormone receptor interactor 10##CR536513|TRIP10|9322|thyroid hormone receptor interactor 10##AK225386|SH2D3A|10045|SH2 domain containing 3A##AK292781|SH2D3A|10045|SH2 domain containing 3A##AK299406|SH2D3A|10045|SH2 domain containing 3A##AK310659|SH2D3A|10045|SH2 domain containing 3A##BC006281|SH2D3A|10045|SH2 domain containing 3A##AF124249|SH2D3A|10045|SH2 domain containing 3A##AY358406|SH2D3A|10045|SH2 domain containing 3A##NM_005490|SH2D3A|10045|SH2 domain containing 3A##AK290293|SH2D3A|10045|SH2 domain containing 3A##NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor	0.91411	CTCF.p2:0:0.914
chr22	23152589	23152726	reg1005836.p1	13.336	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	-17551	+	TSC_hg19_v1_chr22_+_23063107 M18645 X53070 BC073786 X57805 X57813 AF026926 L35916 L35917 L35918 L35920 U43769 X64165 X64166 X54442	-89526	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	-97775	+	TSC_hg19_v1_chr22_+_23154240 L29158 L29159 L29160 L29161 L29164 BC032452 BC089414 AY190827 X57810 L26902	1618	+	X62125 TSC_hg19_v1_chr22_+_23165276 AK129603 BC071804 BC033102 CU689610 L03633 HM996064 HM996172 AF124174 AF194540 AF194541 AF194542 AF194543 AF194544 AF194545 AF194546 AF194547 AF194548 AF194549 AF194550 AF194551 AF194552 AF194553 AF194554 AF194555 AF194556 AF194557 AF194558 AF194559 AF194560 AF194561 AF194562 AF194563 AF194564 AF194565 AF194566 AF194567 AF194568 AF194569 AF194570 AF194571 AF194572 AF194573 AF194574 AF194575 AF194576 AF194577 AJ388658 AJ697911 AM181371 AM183998 AM184000 AM184018 AY685383 AY942038 DQ098709 DQ098711 DQ098766 DQ098772 DQ098775 DQ098778 DQ098782 DQ322816 DQ322984 DQ322992 EF589387 EF589498 EF589544 GU086862 L26532 Y09387 AM184068 DQ098712 DQ098779 AJ399866 AY050712 DQ322899 DQ322900 DQ322979 L21956 S67988 AY950800 U09888 U09892 Y08149 AF103683 AF044486 AY962389 AF092503 AJ408283 DQ098753 Z46858 DQ098738 DQ098739 DQ098762 L38428 DQ098710 AF103704 AF103701 AF103718 AF490954 AF490947 AF103709 AF103640 AF103644 AF103645 AF103647 AF103697 AF103698 AF103700 U87151	12738	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	61036	+	L35918|IGLJ3|28831|immunoglobulin lambda joining 3##BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3##BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3	0.78932	CTCF.p2:-7:0.789
chr8	28451600	28451720	reg1005331.p1	13.335	+	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	-99895	+	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	-103881	-	AK002050 AK023418 NM_018660 AB057659 AB073627	-207699	-	TSC_hg19_v1_chr8_+_28559032 AB011091	107415	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	107490	+	TSC_hg19_v1_chr8_-_28747454 BC016687 AK225072 AK304525 AK298468 NM_001172562 BC025267 AK300593 AK295977 AK001733 AK225530	295800	-	NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##AB011091|EXTL3|2137|exostoses (multiple)-like 3##AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3##BC016687|INTS9|55756|integrator complex subunit 9##AK225072|INTS9|55756|integrator complex subunit 9##AK304525|INTS9|55756|integrator complex subunit 9##AK298468|INTS9|55756|integrator complex subunit 9##NM_001172562|INTS9|55756|integrator complex subunit 9##BC025267|INTS9|55756|integrator complex subunit 9##AK300593|INTS9|55756|integrator complex subunit 9##AK295977|INTS9|55756|integrator complex subunit 9##AK001733|INTS9|55756|integrator complex subunit 9##AK225530|INTS9|55756|integrator complex subunit 9	0.116906	
chr13	77047803	77047936	reg1006261.p1	13.334	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-713029	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-837399	+	AF330045 NM_005358	-853300	+	BC013764 TSC_hg19_v1_chr13_-_77460431	412531	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	412738	-	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	518300	+	NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5	0.999912	CTCF.p2:4:1.000
chr22	22785952	22786083	reg1005877.p1	13.334	+	TSC_hg19_v1_chr22_+_22764097 M97923 M97922 BC020233 BC022098 X80306 BC012876 BC073769 BC073770 X57811 AF490938 AJ131057 JF806287 U96044 L26900 L26908 L26901 HM996154 HM996200 HM996261 HM996384 HM996406 HM996445 AB064022 AY686890 HM996105 AB027448 AB063983 AB064005 AB114461 AB114463 AB114465 AB114467 AB114468 AB114470 AB114471 AB114472 AB363370 AB363380 AB363386 AB363387 AB363389 AB363390 AB363392 AB363393 AB363394 AF058065 AF058066 AF058067 AF060124 AF060127 AF063768 AF064495 AF064499 AF320834 AF320844 AF362765 AF394198 AJ238330 AJ276100 AJ298041 AJ399845 AJ399849 AJ399852 AJ399856 AJ399867 AJ399868 AJ399869 AM040515 AM040578 AM181362 AM181366 AY028996 AY942050 AY942088 AY942095 AY942098 AY942100 AY942127 DQ098691 DQ098693 DQ098745 DQ098749 DQ098786 DQ187499 DQ187503 DQ187571 DQ187623 DQ187624 DQ187625 DQ187626 DQ187694 DQ187719 DQ187722 DQ187723 DQ322742 DQ322810 DQ322821 DQ322822 DQ322823 DQ322874 DQ323004 DQ490721 DQ490722 DQ490723 DQ840923 DQ840924 DQ840925 DQ840930 DQ840933 DQ840937 DQ841069 DQ841085 DQ841092 DQ841094 DQ841095 DQ841098 DQ841102 DQ841104 DQ841105 DQ841106 DQ841107 DQ841108 DQ841109 DQ841110 DQ841111 DQ841112 DQ841114 DQ841115 DQ841116 DQ841117 EF589403 EF589431 EF589450 EF589512 EF589542 EF589558 EF710775 EF710776 EF710777 EF710778 EF710779 EF710780 EF710781 EF710782 EF711006 EF711007 EF711008 EF711009 EU599322 FJ385471 S73120 X91132 Z18835 DQ098692 X91133 DQ098695 HM996447 U09885 AF044481 AF044482 AF044483 AJ580928 X83712 X83713 AB114466 AY942023 AY062351 AY998675 DQ098694 DQ098812 DQ098765 AJ241371 X92997 X93002 X93004 AJ298616 U70235 AY062352 AY998672 AF103597 AF103703 AF103635 FJ385549 AF032355 AF103626 AF103705 AF103676 AF043584 AF103615 AF103648 AF103650 AF103714 AF043585 AF043587 AF043588 AF052823 AF043583 AY180392 AF043592 S42404 AF043589 AF043591	-21773	+	TSC_hg19_v1_chr22_+_22758538 GU179344	-27453	+	TSC_hg19_v1_chr22_+_22735207 BC073784 BC073795 X57815 AY204758 S63730 X57819 X57817	-50787	+	TSC_hg19_v1_chr22_+_22786291 L22588	272	+	TSC_hg19_v1_chr22_-_22863061 BC040020	77064	-	AK097608 NM_080764	77487	-	X57817|IGLJ3|28831|immunoglobulin lambda joining 3##BC040020|ZNF280B|140883|zinc finger protein 280B##AK097608|ZNF280B|140883|zinc finger protein 280B##NM_080764|ZNF280B|140883|zinc finger protein 280B	0.923503	CTCF.p2:-4:0.924
chr6	125635387	125635509	reg1005495.p1	13.334	+	TSC_hg19_v1_chr6_-_125623231 BC001671 NM_016063	-12201	-	TSC_hg19_v1_chr6_-_125623123 AF529363 BC066332 BC061520 BC003357 AF151888	-12343	-	AK124817 NM_001003395	-160072	+	TSC_hg19_v1_chr6_+_126070724 NM_012259	435279	+	TSC_hg19_v1_chr6_+_126070775 AF173901	435318	+	AK289943 AF232238 AB044755 BC007707 TSC_hg19_v1_chr6_+_126070853 AF237949 AJ249545	435394	+	BC001671|HDDC2|51020|HD domain containing 2##NM_016063|HDDC2|51020|HD domain containing 2##AF529363|HDDC2|51020|HD domain containing 2##BC066332|HDDC2|51020|HD domain containing 2##BC061520|HDDC2|51020|HD domain containing 2##BC003357|HDDC2|51020|HD domain containing 2##AF151888|HDDC2|51020|HD domain containing 2##AK124817|TPD52L1|7164|tumor protein D52-like 1##NM_001003395|TPD52L1|7164|tumor protein D52-like 1##NM_012259|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF173901|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AK289943|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF232238|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AB044755|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##BC007707|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF237949|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AJ249545|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	0.0	
chr9	129728225	129728368	reg1005810.p1	13.334	+	AF221098 NM_001190728 AB385313 CU689706	-3761	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	-51192	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	-105352	+	AK075026 TSC_hg19_v1_chr9_-_129870392	142056	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	156612	-	TSC_hg19_v1_chr9_-_129884962 AK312876	156666	-	AF221098|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190728|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AK075026|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2	0.267976	CTCF.p2:-14:0.268
chr10	21567793	21567914	reg1004165.p1	13.333	+	TSC_hg19_v1_chr10_-_21463021 BC126132 BC126134 BC144201 AJ580772 NM_001173484 NM_213569	-104786	-	AB209311 TSC_hg19_v1_chr10_-_21462987	-104866	-	BC140744 BC144447 NM_001010896 NM_001177483	-132366	-	BC130594 BC132974 TSC_hg19_v1_chr10_-_21785960	218079	-	TSC_hg19_v1_chr10_-_21786190 BC040880	218338	-	TSC_hg19_v1_chr10_-_21786207 NM_001010911	218372	-	BC126132|NEBL|10529|nebulette##BC126134|NEBL|10529|nebulette##BC144201|NEBL|10529|nebulette##AJ580772|NEBL|10529|nebulette##NM_001173484|NEBL|10529|nebulette##NM_213569|NEBL|10529|nebulette##AB209311|NEBL|10529|nebulette##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113##BC130594|C10orf114|399726|chromosome 10 open reading frame 114##BC132974|C10orf114|399726|chromosome 10 open reading frame 114##BC040880|C10orf114|399726|chromosome 10 open reading frame 114##NM_001010911|C10orf114|399726|chromosome 10 open reading frame 114	0.99942	CTCF.p2:-23:0.999
chr11	65133863	65133961	reg1003445.p1	13.333	+	NM_145719	-11631	+	TSC_hg19_v1_chr11_+_65101347 BC014889 AK291944 U94585 AB463002 BT006718 DQ892397 DQ895612	-32561	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	-32628	+	BC036869 BX648573 NM_001077241 NM_182556	16212	-	NM_031904 TSC_hg19_v1_chr11_+_65154083 BC021094	20152	+	TSC_hg19_v1_chr11_+_65154127 AK074850 BC033851 AK056778 BC044658 AK291678 AK304363 BC051695	20199	+	NM_145719|TIGD3|220359|tigger transposable element derived 3##BC014889|DPF2|5977|D4, zinc and double PHD fingers family 2##AK291944|DPF2|5977|D4, zinc and double PHD fingers family 2##U94585|DPF2|5977|D4, zinc and double PHD fingers family 2##BT006718|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ892397|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ895612|DPF2|5977|D4, zinc and double PHD fingers family 2##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2##BC036869|SLC25A45|283130|solute carrier family 25, member 45##BX648573|SLC25A45|283130|solute carrier family 25, member 45##NM_001077241|SLC25A45|283130|solute carrier family 25, member 45##NM_182556|SLC25A45|283130|solute carrier family 25, member 45##NM_031904|FRMD8|83786|FERM domain containing 8##AK074850|FRMD8|83786|FERM domain containing 8##BC033851|FRMD8|83786|FERM domain containing 8##AK056778|FRMD8|83786|FERM domain containing 8##BC044658|FRMD8|83786|FERM domain containing 8##AK291678|FRMD8|83786|FERM domain containing 8##AK304363|FRMD8|83786|FERM domain containing 8##BC051695|FRMD8|83786|FERM domain containing 8	0.045146	
chr19	2474661	2474794	reg1003887.p1	13.333	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-17767	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-17791	-	BT007441 EU832653 EU832731 TSC_hg19_v1_chr19_-_2456904	-17837	-	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	1511	+	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	227968	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	228015	-	NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BT007441|LMNB2|84823|lamin B2##EU832653|LMNB2|84823|lamin B2##EU832731|LMNB2|84823|lamin B2##NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7	0.999913	CTCF.p2:-10:1.000
chr9	35477356	35477458	reg1002554.p1	13.333	+	TSC_hg19_v1_chr9_+_35162109 BC111781 BC111800	-315298	+	TSC_hg19_v1_chr9_+_35161986 NM_006377 AB209998 AK296836 AF020202	-315405	+	TSC_hg19_v1_chr9_-_35115860 AK022837 AK021622 BC004406 NM_025182 AK307682	-361530	-	TSC_hg19_v1_chr9_+_35489994 NM_014806	12590	+	TSC_hg19_v1_chr9_+_35490107 BC150211 AB002373 BC042915	12677	+	NM_001135999	61221	+	BC111781|UNC13B|10497|unc-13 homolog B (C. elegans)##BC111800|UNC13B|10497|unc-13 homolog B (C. elegans)##NM_006377|UNC13B|10497|unc-13 homolog B (C. elegans)##AB209998|UNC13B|10497|unc-13 homolog B (C. elegans)##AK296836|UNC13B|10497|unc-13 homolog B (C. elegans)##AF020202|UNC13B|10497|unc-13 homolog B (C. elegans)##AK022837|FAM214B|80256|family with sequence similarity 214, member B##AK021622|FAM214B|80256|family with sequence similarity 214, member B##BC004406|FAM214B|80256|family with sequence similarity 214, member B##NM_025182|FAM214B|80256|family with sequence similarity 214, member B##AK307682|FAM214B|80256|family with sequence similarity 214, member B##NM_014806|RUSC2|9853|RUN and SH3 domain containing 2##BC150211|RUSC2|9853|RUN and SH3 domain containing 2##AB002373|RUSC2|9853|RUN and SH3 domain containing 2##NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2	0.981395	CTCF.p2:23:0.981
chr11	10434950	10435059	reg1004390.p1	13.332	+	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	-108375	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	-119238	-	AK098060 TSC_hg19_v1_chr11_+_9779882	-655142	+	AK295046 NM_001172431	36863	+	NM_000480 BC126118 TSC_hg19_v1_chr11_+_10472246 AK311436 M84720 AK289998 AK294444 AK313039 HQ258646	37391	+	NM_001025389 D12775 AK308181 M84721 AK299113 TSC_hg19_v1_chr11_+_10476953	41815	+	AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK098060|LOC283104|283104|uncharacterized LOC283104##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3##NM_000480|AMPD3|272|adenosine monophosphate deaminase 3##BC126118|AMPD3|272|adenosine monophosphate deaminase 3##AK311436|AMPD3|272|adenosine monophosphate deaminase 3##M84720|AMPD3|272|adenosine monophosphate deaminase 3##AK289998|AMPD3|272|adenosine monophosphate deaminase 3##AK294444|AMPD3|272|adenosine monophosphate deaminase 3##AK313039|AMPD3|272|adenosine monophosphate deaminase 3##HQ258646|AMPD3|272|adenosine monophosphate deaminase 3##NM_001025389|AMPD3|272|adenosine monophosphate deaminase 3##D12775|AMPD3|272|adenosine monophosphate deaminase 3##AK308181|AMPD3|272|adenosine monophosphate deaminase 3##M84721|AMPD3|272|adenosine monophosphate deaminase 3##AK299113|AMPD3|272|adenosine monophosphate deaminase 3	0.223017	CTCF.p2:0:0.223
chr14	68715239	68715420	reg1004559.p1	13.331	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-428809	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-432030	-	AK315462 NM_152443	-546727	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	544391	-	NM_001244698 NM_004926	545301	-	NM_001244701 AB528867	547655	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.924623	CTCF.p2:-35:0.925
chr1	55803895	55804033	reg1006023.p1	13.331	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-122880	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-122928	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-298740	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	1241055	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	1241166	-	AK312439 TSC_hg19_v1_chr1_-_57045216	1241253	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.996083	CTCF.p2:13:0.996
chr3	176590646	176590761	reg1003871.p1	13.331	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	-2013613	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	-2431983	+	BC032555 NM_014932	-3474460	+	TSC_hg19_v1_chr3_-_176914267 BX648935	323547	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	324248	-	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	324356	-	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.12542	
chr11	70601747	70601873	reg1005754.p1	13.329	+	BC093885 BC112097 BC143389 TSC_hg19_v1_chr11_-_70507947	-93860	-	TSC_hg19_v1_chr11_-_70507919 AB208027 NM_133266	-93892	-	AF141901 BC114484 BC113876 TSC_hg19_v1_chr11_-_70507895	-93943	-	AB208026 TSC_hg19_v1_chr11_-_70672714	70869	-	AK095088 TSC_hg19_v1_chr11_-_70672870	71056	-	TSC_hg19_v1_chr11_-_70858244 DQ152234	256496	-	BC093885|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC112097|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC143389|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AB208027|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##NM_133266|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AF141901|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC114484|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC113876|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AB208026|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AK095088|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##DQ152234|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2	1.862675	CTCF.p2:-2:1.000	CTCF.p2:62:0.863
chr7	124425363	124425485	reg1004016.p1	13.329	+	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	-19628	-	AF502281 CU691802 AB464545 AF017262 TSC_hg19_v1_chr7_-_124405121	-20349	-	TSC_hg19_v1_chr7_-_123673486 NM_001136002	-751920	-	BC130600 BC130604 NM_001024603	5378	-	NM_001042594 NM_015450	144612	-	NM_000845	2458144	-	BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##AF502281|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##AF017262|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_001136002|TMEM229A|730130|transmembrane protein 229A##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872##NM_001042594|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_015450|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8	0.0	
chr12	15148878	15149008	reg1004073.p2	13.328	+	NM_006205 DQ980604 D45399	-22977	+	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	-34395	-	CU688844 BC030218 AY358536 NM_152321 AK056677	-57482	-	AK311016 BC007997 AK295343 AK313881 NM_001190726 NM_032918	225407	-	NM_002848 NM_030667 TSC_hg19_v1_chr12_+_15475264 AB209729	326317	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	326608	+	NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##BC030218|ERP27|121506|endoplasmic reticulum protein 27##AY358536|ERP27|121506|endoplasmic reticulum protein 27##NM_152321|ERP27|121506|endoplasmic reticulum protein 27##AK056677|ERP27|121506|endoplasmic reticulum protein 27##AK311016|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##BC007997|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK295343|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK313881|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_001190726|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_032918|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AB209729|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	0.996439	CTCF.p2:4:0.996
chr15	48280230	48280359	reg1005576.p1	13.328	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	-269609	+	TSC_hg19_v1_chr15_+_48009541 AK290032	-270706	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	-803907	+	AF348468 NM_205850 BC110836 BC113628 BC113630 BC143950 DQ665306 DQ665307 HQ258279	132910	+	AF190159 TSC_hg19_v1_chr15_-_48470320 AF106685	190035	-	TSC_hg19_v1_chr15_-_48470503 AB037762 BC152420 BC152451 BC068523 AK023133 NM_016132	190223	-	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF348468|SLC24A5|283652|solute carrier family 24, member 5##NM_205850|SLC24A5|283652|solute carrier family 24, member 5##BC113628|SLC24A5|283652|solute carrier family 24, member 5##BC113630|SLC24A5|283652|solute carrier family 24, member 5##BC143950|SLC24A5|283652|solute carrier family 24, member 5##DQ665306|SLC24A5|283652|solute carrier family 24, member 5##DQ665307|SLC24A5|283652|solute carrier family 24, member 5##HQ258279|SLC24A5|283652|solute carrier family 24, member 5##AF190159|MYEF2|50804|myelin expression factor 2##AF106685|MYEF2|50804|myelin expression factor 2##AB037762|MYEF2|50804|myelin expression factor 2##BC152420|MYEF2|50804|myelin expression factor 2##BC152451|MYEF2|50804|myelin expression factor 2##BC068523|MYEF2|50804|myelin expression factor 2##AK023133|MYEF2|50804|myelin expression factor 2##NM_016132|MYEF2|50804|myelin expression factor 2	0.979764	CTCF.p2:19:0.980
chr8	39749663	39749775	reg1004159.p1	13.328	+	X99374 CU687896 CU689996 DQ891615 DQ894807 AJ133005 U52370 BC034957 BC064547 AK301734 U38805 NM_001464	-53979	-	NM_001190956 NM_014237 AK313961 AY358321 BC070279 BC034624 CU687082 AJ133004 BC121045 BC121046 AK225744	-307602	+	NM_145004 AK300148 AY172952 AY358739 AK313864 BC026169 BC030698 BC034975 AK122608 BC028702 BC030014 BC026085 DQ890910 DQ894061 CU693126	-784549	+	NM_002164 AK313259 BC027882 X17668 AY221100 CU693308 JF772862	21665	+	AK128691 NM_194294	42754	+	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	261299	+	X99374|ADAM2|2515|ADAM metallopeptidase domain 2##DQ891615|ADAM2|2515|ADAM metallopeptidase domain 2##DQ894807|ADAM2|2515|ADAM metallopeptidase domain 2##AJ133005|ADAM2|2515|ADAM metallopeptidase domain 2##U52370|ADAM2|2515|ADAM metallopeptidase domain 2##BC034957|ADAM2|2515|ADAM metallopeptidase domain 2##BC064547|ADAM2|2515|ADAM metallopeptidase domain 2##AK301734|ADAM2|2515|ADAM metallopeptidase domain 2##U38805|ADAM2|2515|ADAM metallopeptidase domain 2##NM_001464|ADAM2|2515|ADAM metallopeptidase domain 2##NM_001190956|ADAM18|8749|ADAM metallopeptidase domain 18##NM_014237|ADAM18|8749|ADAM metallopeptidase domain 18##AK313961|ADAM18|8749|ADAM metallopeptidase domain 18##AY358321|ADAM18|8749|ADAM metallopeptidase domain 18##BC070279|ADAM18|8749|ADAM metallopeptidase domain 18##BC034624|ADAM18|8749|ADAM metallopeptidase domain 18##AJ133004|ADAM18|8749|ADAM metallopeptidase domain 18##BC121045|ADAM18|8749|ADAM metallopeptidase domain 18##BC121046|ADAM18|8749|ADAM metallopeptidase domain 18##AK225744|ADAM18|8749|ADAM metallopeptidase domain 18##NM_145004|ADAM32|203102|ADAM metallopeptidase domain 32##AK300148|ADAM32|203102|ADAM metallopeptidase domain 32##AY172952|ADAM32|203102|ADAM metallopeptidase domain 32##AY358739|ADAM32|203102|ADAM metallopeptidase domain 32##AK313864|ADAM32|203102|ADAM metallopeptidase domain 32##BC026169|ADAM32|203102|ADAM metallopeptidase domain 32##BC030698|ADAM32|203102|ADAM metallopeptidase domain 32##BC034975|ADAM32|203102|ADAM metallopeptidase domain 32##AK122608|ADAM32|203102|ADAM metallopeptidase domain 32##BC028702|ADAM32|203102|ADAM metallopeptidase domain 32##BC030014|ADAM32|203102|ADAM metallopeptidase domain 32##BC026085|ADAM32|203102|ADAM metallopeptidase domain 32##DQ890910|ADAM32|203102|ADAM metallopeptidase domain 32##DQ894061|ADAM32|203102|ADAM metallopeptidase domain 32##NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1##AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1##X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1##AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1##JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1##AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4	0.800004	CTCF.p2:-5:0.800
chr10	54404561	54404695	reg1006437.p1	13.327	+	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-330513	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-945281	-	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-1570337	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	126798	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2156370	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	2954146	+	NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5	0.997212	CTCF.p2:-10:0.997
chr10	9251288	9251400	reg1004053.p1	13.327	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-1153861	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-1154569	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-1154695	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	1795913	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	1795941	+	AK299548 TSC_hg19_v1_chr10_+_11047339	1795996	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.889792	CTCF.p2:6:0.890
chr17	16905225	16905347	reg1004226.p2	13.327	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	-29882	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-311682	+	AK131401 NM_020787	-348125	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	40678	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	204327	-	TSC_hg19_v1_chr17_-_17109636 BC031263 AK295282 NM_178836	204371	-	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6##BC031263|PLD6|201164|phospholipase D family, member 6##AK295282|PLD6|201164|phospholipase D family, member 6##NM_178836|PLD6|201164|phospholipase D family, member 6	0.999379	CTCF.p2:-10:0.999
chr7	30485552	30485703	reg1005247.p1	13.327	+	TSC_hg19_v1_chr7_+_30324634 AY054122	-160971	+	TSC_hg19_v1_chr7_+_30324515 AF527533	-161078	+	AF513707 NM_147128	-161705	+	AY128682 AY128683 AY128684 AY128685 AY128686 AF113925 BC040339 AK300367 AK023969 NM_006092	32694	-	CU674304 TSC_hg19_v1_chr7_-_30544445 BC013937 BC005356 AK315608 BC019243 BC000625 NM_001199815 NM_001199816 NM_001199817 NM_024051	58774	-	NM_002047	148553	+	AY054122|ZNRF2|223082|zinc and ring finger 2##AF527533|ZNRF2|223082|zinc and ring finger 2##AF513707|ZNRF2|223082|zinc and ring finger 2##NM_147128|ZNRF2|223082|zinc and ring finger 2##AY128682|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128683|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128684|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128685|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128686|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AF113925|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC040339|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK300367|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK023969|NOD1|10392|nucleotide-binding oligomerization domain containing 1##NM_006092|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC013937|GGCT|79017|gamma-glutamylcyclotransferase##BC005356|GGCT|79017|gamma-glutamylcyclotransferase##AK315608|GGCT|79017|gamma-glutamylcyclotransferase##BC019243|GGCT|79017|gamma-glutamylcyclotransferase##BC000625|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199815|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199816|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199817|GGCT|79017|gamma-glutamylcyclotransferase##NM_024051|GGCT|79017|gamma-glutamylcyclotransferase##NM_002047|GARS|2617|glycyl-tRNA synthetase	0.0	
chr10	16587261	16587402	reg1005541.p1	13.326	+	NM_001010908	-23328	-	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	-108346	+	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	-684840	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	272028	-	TSC_hg19_v1_chr10_-_16859397 AK225681 AK312520	272063	-	TSC_hg19_v1_chr10_-_16859451 BC015644 BC005993 BC107898 BX647733 NM_012425 NM_152724	272104	-	NM_001010908|C1QL3|389941|complement component 1, q subcomponent-like 3##AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1##AK225681|RSU1|6251|Ras suppressor protein 1##AK312520|RSU1|6251|Ras suppressor protein 1##BC015644|RSU1|6251|Ras suppressor protein 1##BC005993|RSU1|6251|Ras suppressor protein 1##BC107898|RSU1|6251|Ras suppressor protein 1##BX647733|RSU1|6251|Ras suppressor protein 1##NM_012425|RSU1|6251|Ras suppressor protein 1##NM_152724|RSU1|6251|Ras suppressor protein 1	0.897535	CTCF.p2:4:0.858
chr6	161188524	161188648	reg1004303.p1	13.326	+	NM_000301 NM_001168338 AK308036 AK312966 AK298338 X05199 M74220 BC060513	-65325	+	NM_005577	-101180	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	-419192	+	TSC_hg19_v1_chr6_+_161412797 BC146770 D86968	224156	+	TSC_hg19_v1_chr6_+_161412815 AF002715 NM_005922 NM_006724	224228	+	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	224272	+	NM_000301|PLG|5340|plasminogen##NM_001168338|PLG|5340|plasminogen##AK308036|PLG|5340|plasminogen##AK312966|PLG|5340|plasminogen##AK298338|PLG|5340|plasminogen##X05199|PLG|5340|plasminogen##M74220|PLG|5340|plasminogen##BC060513|PLG|5340|plasminogen##NM_005577|LPA|4018|lipoprotein, Lp(a)##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##BC146770|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##D86968|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AF002715|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_005922|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_006724|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4	1.032519	CTCF.p2:19:0.983
chr18	29135983	29136120	reg1004495.p1	13.325	+	NM_001943 TSC_hg19_v1_chr18_+_29078205 BC099655 BC099656 BC099657 Z26317 AK308408	-57908	+	AK290367 NM_001944 M76482	-108307	+	AY177664 NM_001134453 NM_177986 AY168788 AY228236 BC132907 BC132909 AY227350	-179245	+	NM_000371 TSC_hg19_v1_chr18_+_29171839 AK312051 BC005310 BC020791 D00096 GU727633 K02091 M10605 X59498 AF162690 BT007189 CR456908 DQ778081 DQ839490 U19780	35746	+	AB024742 BC074835 BC074884 BC069620 BC069642 AF069054 AK314860 AF097159 NM_004775	128488	-	BC103999 BC104000 BC104001 AK302337 NM_001034172	204719	-	NM_001943|DSG2|1829|desmoglein 2##BC099655|DSG2|1829|desmoglein 2##BC099656|DSG2|1829|desmoglein 2##BC099657|DSG2|1829|desmoglein 2##Z26317|DSG2|1829|desmoglein 2##AK308408|DSG2|1829|desmoglein 2##AK290367|DSG3|1830|desmoglein 3##NM_001944|DSG3|1830|desmoglein 3##M76482|DSG3|1830|desmoglein 3##AY177664|DSG4|147409|desmoglein 4##NM_001134453|DSG4|147409|desmoglein 4##NM_177986|DSG4|147409|desmoglein 4##AY168788|DSG4|147409|desmoglein 4##AY228236|DSG4|147409|desmoglein 4##BC132907|DSG4|147409|desmoglein 4##BC132909|DSG4|147409|desmoglein 4##AY227350|DSG4|147409|desmoglein 4##NM_000371|TTR|7276|transthyretin##AK312051|TTR|7276|transthyretin##BC005310|TTR|7276|transthyretin##BC020791|TTR|7276|transthyretin##D00096|TTR|7276|transthyretin##GU727633|TTR|7276|transthyretin##K02091|TTR|7276|transthyretin##M10605|TTR|7276|transthyretin##X59498|TTR|7276|transthyretin##AF162690|TTR|7276|transthyretin##BT007189|TTR|7276|transthyretin##CR456908|TTR|7276|transthyretin##DQ839490|TTR|7276|transthyretin##U19780|TTR|7276|transthyretin##AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC103999|MCART2|147407|mitochondrial carrier triple repeat 2##BC104000|MCART2|147407|mitochondrial carrier triple repeat 2##BC104001|MCART2|147407|mitochondrial carrier triple repeat 2##AK302337|MCART2|147407|mitochondrial carrier triple repeat 2##NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2	0.999838	CTCF.p2:-13:1.000
chr17	15732169	15732273	reg1003870.p1	13.324	+	NM_178571 AK292544 AK315847 BC028414 BC047400	-96628	+	AK315062 BC015730 BC025260 AK092259 AB058777 TSC_hg19_v1_chr17_+_15603063	-129166	+	NM_001130842 NM_020652 AK296547 TSC_hg19_v1_chr17_+_15603030	-129258	+	NM_000676 X68487	116009	+	TSC_hg19_v1_chr17_+_15848443 M97759 BC025722 AB464451 DQ891714 DQ894891 CU693036 AY136748	116271	+	BC105128 BC112107 NM_017775 TSC_hg19_v1_chr17_+_15902780 AK056878	170544	+	NM_178571|TBC1D26|353149|TBC1 domain family, member 26##AK292544|TBC1D28|254272|TBC1 domain family, member 28##AK315847|TBC1D26|353149|TBC1 domain family, member 26##BC028414|TBC1D26|353149|TBC1 domain family, member 26##BC047400|TBC1D26|353149|TBC1 domain family, member 26##AK315062|ZNF286A|57335|zinc finger protein 286A##BC015730|ZNF286A|57335|zinc finger protein 286A##BC025260|ZNF286A|57335|zinc finger protein 286A##AK092259|ZNF286A|57335|zinc finger protein 286A##NM_001130842|ZNF286A|57335|zinc finger protein 286A##NM_020652|ZNF286A|57335|zinc finger protein 286A##NM_000676|ADORA2B|136|adenosine A2b receptor##X68487|ADORA2B|136|adenosine A2b receptor##M97759|ADORA2B|136|adenosine A2b receptor##BC025722|ADORA2B|136|adenosine A2b receptor##DQ891714|ADORA2B|136|adenosine A2b receptor##DQ894891|ADORA2B|136|adenosine A2b receptor##AY136748|ADORA2B|136|adenosine A2b receptor##BC105128|TTC19|54902|tetratricopeptide repeat domain 19##BC112107|TTC19|54902|tetratricopeptide repeat domain 19##NM_017775|TTC19|54902|tetratricopeptide repeat domain 19##AK056878|TTC19|54902|tetratricopeptide repeat domain 19	0.912227	CTCF.p2:1:0.912
chr18	60093045	60093178	reg1006188.p1	13.324	+	AB209762 AF018253 NM_003839 AB527346	-100561	+	TSC_hg19_v1_chr18_+_59855176 AB384606	-237901	+	TSC_hg19_v1_chr18_+_59854540 BX648481	-238523	+	NM_017742 TSC_hg19_v1_chr18_+_60190696 BC006340	97643	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	289553	+	TSC_hg19_v1_chr18_+_60383911 AB011178	290815	+	AB209762|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##AF018253|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_003839|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##BX648481|KIAA1468|57614|KIAA1468##NM_017742|ZCCHC2|54877|zinc finger, CCHC domain containing 2##BC006340|ZCCHC2|54877|zinc finger, CCHC domain containing 2##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1	0.79822	CTCF.p2:-7:0.798
chr2	178128297	178128445	reg1004939.p1	13.324	+	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	-50897	+	BC013438 TSC_hg19_v1_chr2_-_177502718	-625683	-	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-994132	+	AK311688 NM_001145412 NM_001145413	200	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	1005	-	AK314816 NM_006164	1487	-	NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC013438|LOC375295|375295|uncharacterized LOC375295##NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##AK314816|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_006164|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.999378	CTCF.p2:14:0.999
chr20	23918097	23918215	reg1005842.p1	13.323	+	AB590893 CU686872 HQ447459 BC069514 X70377 BC062678 NM_001900	-57810	-	CU687582 NM_001322 BC062679	-110824	-	J03870 BC021225 NM_001898	-186591	-	L20492 L20491 NM_178312	49315	-	BC040904 NM_178311	51259	-	AK024282 NM_024893	531678	+	HQ447459|CST5|1473|cystatin D##BC069514|CST5|1473|cystatin D##X70377|CST5|1473|cystatin D##BC062678|CST5|1473|cystatin D##NM_001900|CST5|1473|cystatin D##NM_001322|CST2|1470|cystatin SA##BC062679|CST2|1470|cystatin SA##J03870|CST1|1469|cystatin SN##BC021225|CST1|1469|cystatin SN##NM_001898|CST1|1469|cystatin SN##L20492|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20491|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178312|GGTLC1|92086|gamma-glutamyltransferase light chain 1##BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1	0.998373	CTCF.p2:-14:0.998
chr6	171022015	171022163	reg1001530.p1	13.323	+	AY948416 AY948417 AB587415 DQ893475 DQ896345 TSC_hg19_v1_chr6_-_170893696 S78085 BC082978 AK297343 BC008378 NM_001199462 NM_001199463 NM_001199464 BC067759 NM_001199461 NM_002598 NM_144781	-128360	-	NM_001172085 NM_003194 AK304648 TSC_hg19_v1_chr6_+_170863459 AK315222 BC110341 Z22828 AK298272 M55654 BC109054 BC109053	-158625	+	TSC_hg19_v1_chr6_-_170862392 AK058050 NM_002793	-159692	-	None	None	None	None	None	None	None	None	None	AY948416|PDCD2|5134|programmed cell death 2##AY948417|PDCD2|5134|programmed cell death 2##DQ893475|PDCD2|5134|programmed cell death 2##DQ896345|PDCD2|5134|programmed cell death 2##S78085|PDCD2|5134|programmed cell death 2##AK297343|PDCD2|5134|programmed cell death 2##BC008378|PDCD2|5134|programmed cell death 2##NM_001199462|PDCD2|5134|programmed cell death 2##NM_001199463|PDCD2|5134|programmed cell death 2##NM_001199464|PDCD2|5134|programmed cell death 2##BC067759|PDCD2|5134|programmed cell death 2##NM_001199461|PDCD2|5134|programmed cell death 2##NM_002598|PDCD2|5134|programmed cell death 2##NM_144781|PDCD2|5134|programmed cell death 2##NM_001172085|TBP|6908|TATA box binding protein##NM_003194|TBP|6908|TATA box binding protein##AK304648|TBP|6908|TATA box binding protein##AK315222|TBP|6908|TATA box binding protein##BC110341|TBP|6908|TATA box binding protein##Z22828|TBP|6908|TATA box binding protein##AK298272|TBP|6908|TATA box binding protein##M55654|TBP|6908|TATA box binding protein##BC109054|TBP|6908|TATA box binding protein##BC109053|TBP|6908|TATA box binding protein##AK058050|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##NM_002793|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1	2.931006	CTCF.p2:-27:0.977	CTCF.p2:40:0.977	CTCF.p2:-95:0.977	CTCF.p2:108:0.977
chr1	160738229	160738348	reg1004531.p2	13.321	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-29224	+	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	-56702	-	AK314244 NM_003037 BC012602	-121225	-	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	27710	+	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	94290	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	116670	-	AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)	0.045836	
chr12	47055279	47055406	reg1004213.p1	13.321	+	TSC_hg19_v1_chr12_-_46766619 NM_018976	-288739	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-289053	-	NM_001077484 NM_030674	-392135	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	164414	-	TSC_hg19_v1_chr12_+_47473404 BC072670	418055	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	418241	-	NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2	0.878616	CTCF.p2:17:0.879
chr13	43543839	43543976	reg1005534.p1	13.321	+	NM_182508 AK310859 AK098238 BC093659 BC112237	-188183	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	-395573	+	BC040889 NM_033012	-407036	+	CU692822 DQ892268 DQ895469 TSC_hg19_v1_chr13_-_43566378 AL831953 AF396928 BC023660 AK313877 AK292461 NM_001002264 NM_033255	22463	-	AF126743 AY248898 NM_013238	53442	+	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	53795	+	NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##DQ892268|EPSTI1|94240|epithelial stromal interaction 1 (breast)##DQ895469|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AL831953|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AF396928|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC023660|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK313877|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK292461|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_001002264|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_033255|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AF126743|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY248898|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_013238|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15	0.979935	CTCF.p2:-7:0.980
chr1	44400532	44400661	reg1004137.p2	13.321	+	AF120274 NM_001136215 NM_057090 NM_057091	-1605	+	AK301829 AY051143 NM_006279 NM_174963 NM_174964 NM_174965 NM_174966 NM_174967 NM_174968 NM_174969 NM_174970 NM_174971 TSC_hg19_v1_chr1_+_44173217 BC050380	-227378	+	TSC_hg19_v1_chr1_-_44173037 BC094867	-227573	-	TSC_hg19_v1_chr1_+_44412483 NM_014652	11865	+	TSC_hg19_v1_chr1_+_44412625 AB018267	12014	+	TSC_hg19_v1_chr1_+_44412640 BC008194	12066	+	AF120274|ARTN|9048|artemin##NM_001136215|ARTN|9048|artemin##NM_057090|ARTN|9048|artemin##NM_057091|ARTN|9048|artemin##AK301829|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##AY051143|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_006279|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174963|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174964|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174965|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174966|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174967|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174968|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174969|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174970|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174971|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC050380|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC094867|LOC100132774|100132774|uncharacterized LOC100132774##NM_014652|IPO13|9670|importin 13##AB018267|IPO13|9670|importin 13##BC008194|IPO13|9670|importin 13	0.999058	CTCF.p2:0:0.999
chr19	14459364	14459502	reg1003832.p1	13.321	+	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	-142385	-	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	-198633	-	TSC_hg19_v1_chr19_+_14247979 BX537706	-211442	+	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	32616	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	32822	+	TSC_hg19_v1_chr19_-_14529877 AK301847	70456	-	AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule##AK301847|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A	0.098194	
chr3	109450860	109450990	reg1005991.p1	13.321	+	AK058092 NM_001145553	-322089	+	TSC_hg19_v1_chr3_-_109056388 BC032846 AK290992 NM_018189	-394522	-	DQ891225 DQ894410 AK001575 AK299290 AB528636 AK298623 TSC_hg19_v1_chr3_-_109056370 AK022698	-394572	-	TSC_hg19_v1_chr3_+_110790623 NM_001243286 NM_015480	1339622	+	TSC_hg19_v1_chr3_+_110790671 BC067808	1339776	+	TSC_hg19_v1_chr3_+_110790825 AF282874 AK075105 NM_001243288	1339969	+	AK058092|FLJ25363|401082|uncharacterized LOC401082##NM_001145553|FLJ25363|401082|uncharacterized LOC401082##BC032846|DPPA4|55211|developmental pluripotency associated 4##AK290992|DPPA4|55211|developmental pluripotency associated 4##NM_018189|DPPA4|55211|developmental pluripotency associated 4##DQ891225|DPPA4|55211|developmental pluripotency associated 4##DQ894410|DPPA4|55211|developmental pluripotency associated 4##AK001575|DPPA4|55211|developmental pluripotency associated 4##AK299290|DPPA4|55211|developmental pluripotency associated 4##AK298623|DPPA4|55211|developmental pluripotency associated 4##AK022698|DPPA4|55211|developmental pluripotency associated 4##NM_001243286|PVRL3|25945|poliovirus receptor-related 3##NM_015480|PVRL3|25945|poliovirus receptor-related 3##BC067808|PVRL3|25945|poliovirus receptor-related 3##AF282874|PVRL3|25945|poliovirus receptor-related 3##AK075105|PVRL3|25945|poliovirus receptor-related 3##NM_001243288|PVRL3|25945|poliovirus receptor-related 3	0.839789	CTCF.p2:7:0.840
chr7	105683346	105683481	reg1005570.p1	13.321	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	-79715	+	TSC_hg19_v1_chr7_+_105517250 AK125261	-166149	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	-166428	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	69268	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	69331	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	69602	-	NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3##AK125261|CDHR3|222256|cadherin-related family member 3##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##X61382|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1	0.916798	CTCF.p2:14:0.917
chr10	557085	557191	reg1003419.p1	13.320	+	BC012586 X86098 NM_001202467 NM_001202468 AB385196 DQ335452 DQ335453 DQ335454 DQ335455 AK296427	-331192	+	TSC_hg19_v1_chr10_+_181412 BC091489 NM_001202464	-375718	+	NM_006624 NM_001202465 NM_001202466 NM_212479 TSC_hg19_v1_chr10_+_180423	-376725	+	AK096000 BC144473 AK296168 TSC_hg19_v1_chr10_+_696010 AK096013	138813	+	TSC_hg19_v1_chr10_-_735609 AB023151 BC063313 NM_014974	178553	-	BC131630 BC152443 D86971 NM_015155	374559	-	BC012586|ZMYND11|10771|zinc finger, MYND-type containing 11##X86098|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202467|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202468|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335452|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335453|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335454|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335455|ZMYND11|10771|zinc finger, MYND-type containing 11##AK296427|ZMYND11|10771|zinc finger, MYND-type containing 11##BC091489|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202464|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202465|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202466|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11##AK096000|C10orf108|414235|chromosome 10 open reading frame 108##AK296168|C10orf108|414235|chromosome 10 open reading frame 108##AK096013|C10orf108|414235|chromosome 10 open reading frame 108##AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##BC131630|LARP4B|23185|La ribonucleoprotein domain family, member 4B##BC152443|LARP4B|23185|La ribonucleoprotein domain family, member 4B##D86971|LARP4B|23185|La ribonucleoprotein domain family, member 4B##NM_015155|LARP4B|23185|La ribonucleoprotein domain family, member 4B	1.029188	CTCF.p2:-3:0.998
chr3	125156755	125156893	reg1006259.p1	13.320	+	AF039019 AL833616 AF432210 AJ236885 L04282 BC035591 BC018971 AK314203 TSC_hg19_v1_chr3_-_125094153 BC050260 NM_021964	-62724	-	AK123001 TSC_hg19_v1_chr3_-_124931591 AX721165 AK131070 NM_024628	-225239	-	AF345197 HQ258349 BC126158 BC126160 AF390442 NM_001195483	-226607	-	AF065485 TSC_hg19_v1_chr3_-_125239047 CU676320 DQ892131 DQ895325 AB528425 AK001835 AK298972 BC018762 BC021002	82207	-	TSC_hg19_v1_chr3_-_125239050 NM_003794	82229	-	TSC_hg19_v1_chr3_-_125314371 NM_022776	157549	-	AF039019|ZNF148|7707|zinc finger protein 148##AL833616|ZNF148|7707|zinc finger protein 148##AF432210|ZNF148|7707|zinc finger protein 148##AJ236885|ZNF148|7707|zinc finger protein 148##L04282|ZNF148|7707|zinc finger protein 148##BC035591|ZNF148|7707|zinc finger protein 148##BC018971|ZNF148|7707|zinc finger protein 148##AK314203|ZNF148|7707|zinc finger protein 148##BC050260|ZNF148|7707|zinc finger protein 148##NM_021964|ZNF148|7707|zinc finger protein 148##AK123001|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_024628|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF065485|SNX4|8723|sorting nexin 4##DQ892131|SNX4|8723|sorting nexin 4##DQ895325|SNX4|8723|sorting nexin 4##AK001835|SNX4|8723|sorting nexin 4##AK298972|SNX4|8723|sorting nexin 4##BC018762|SNX4|8723|sorting nexin 4##NM_003794|SNX4|8723|sorting nexin 4##NM_022776|OSBPL11|114885|oxysterol binding protein-like 11	0.99975	CTCF.p2:11:1.000
chr1	168409125	168409260	reg1005385.p1	13.319	+	AJ010277 NM_005149 BC093664 BC093666 EU446671	-158890	+	TSC_hg19_v1_chr1_+_168195262 BC068098 CU686619	-213899	+	TSC_hg19_v1_chr1_+_168195254 AK290325 NM_199344	-213941	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	104025	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	136600	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	289237	-	AJ010277|TBX19|9095|T-box 19##NM_005149|TBX19|9095|T-box 19##BC093664|TBX19|9095|T-box 19##BC093666|TBX19|9095|T-box 19##EU446671|TBX19|9095|T-box 19##BC068098|SFT2D2|375035|SFT2 domain containing 2##AK290325|SFT2D2|375035|SFT2 domain containing 2##NM_199344|SFT2D2|375035|SFT2 domain containing 2##BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin	0.497294	CTCF.p2:-10:0.497
chr2	108966597	108966728	reg1003827.p1	13.319	+	AF186252 AF186255 NM_001056 NM_176825 AF186251 AF186254 AK297086 AK313193 AK298306 U66036 AF186253 AF186256 AB008164 AF026303 BC005353	-61377	+	AB528243 NM_001008743	-103012	+	AK315280 AB084377 AK300801 AB043997 NM_021815 BC111525 BC111524	-363660	+	BC058861 NM_006588 AK298755 AF055584 AK297851 BC125043	27841	+	NM_181453 BC037774 TSC_hg19_v1_chr2_+_109065661	98958	+	TSC_hg19_v1_chr2_+_109065677 AF432211 AB002334 BC146789	99023	+	AF186252|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186255|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001056|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_176825|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186251|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186254|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK297086|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK313193|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK298306|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##U66036|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186253|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186256|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AB008164|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF026303|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC005353|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3##AK315280|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB084377|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AK300801|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB043997|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_021815|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111525|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111524|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC058861|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##NM_006588|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK298755|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK297851|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##BC125043|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##NM_181453|GCC2|9648|GRIP and coiled-coil domain containing 2##BC037774|GCC2|9648|GRIP and coiled-coil domain containing 2##AF432211|GCC2|9648|GRIP and coiled-coil domain containing 2##AB002334|GCC2|9648|GRIP and coiled-coil domain containing 2##BC146789|GCC2|9648|GRIP and coiled-coil domain containing 2	0.625318	CTCF.p2:-6:0.625
chr6	64308590	64308739	reg1005691.p1	13.319	+	TSC_hg19_v1_chr6_+_64286554 U48296 AB385532 CU692824 DQ890715 DQ893895 EU831599 EU831686 AB451314 AB451444	-22054	+	TSC_hg19_v1_chr6_+_64282463 BC023975	-26121	+	TSC_hg19_v1_chr6_+_64282432 AK312526	-26229	+	TSC_hg19_v1_chr6_+_64345706 AK055678	37026	+	TSC_hg19_v1_chr6_+_64345719 AK307869	37052	+	TSC_hg19_v1_chr6_+_64345729 AK315868 AK298580	37159	+	U48296|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##DQ890715|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##DQ893895|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##EU831599|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##EU831686|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AB451314|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AB451444|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##BC023975|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AK312526|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AK055678|PHF3|23469|PHD finger protein 3##AK307869|PHF3|23469|PHD finger protein 3##AK315868|PHF3|23469|PHD finger protein 3##AK298580|PHF3|23469|PHD finger protein 3	0.932145	CTCF.p2:-10:0.932
chr1	151273486	151273600	reg1003988.p2	13.318	+	TSC_hg19_v1_chr1_+_151254774 AB037862 BC032463 NM_020832	-18770	+	TSC_hg19_v1_chr1_+_151254004 CR749307	-19501	+	TSC_hg19_v1_chr1_+_151227240 AB033605 BC002365 AB527552	-46296	+	TSC_hg19_v1_chr1_-_151299858 BC000029 AK294606	26307	-	AK311292 NM_001198773 NM_001198775 NM_002651 TSC_hg19_v1_chr1_-_151300134	26606	-	TSC_hg19_v1_chr1_-_151300176 BC040300 NM_001198774	26639	-	AB037862|ZNF687|57592|zinc finger protein 687##BC032463|ZNF687|57592|zinc finger protein 687##NM_020832|ZNF687|57592|zinc finger protein 687##CR749307|ZNF687|57592|zinc finger protein 687##AB033605|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##BC002365|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##BC000029|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##AK294606|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##AK311292|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##NM_001198773|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##NM_001198775|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##NM_002651|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##BC040300|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##NM_001198774|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta	0.045369	
chr7	43878597	43878737	reg1004355.p2	13.318	+	TSC_hg19_v1_chr7_+_43798283 AK291862 X93086 U34877	-80351	+	TSC_hg19_v1_chr7_+_43798278 NM_000712 NM_001253823 BC005902 BC008456	-80400	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	-109573	-	AF161453 CU680250 BC012167 TSC_hg19_v1_chr7_-_43909107 AK054982 BC054865 NM_032014	30449	-	AB040940 TSC_hg19_v1_chr7_-_43946044	67310	-	TSC_hg19_v1_chr7_-_43946196 AB384612 AY078404 BC018426 BX640797 BX648505 AK314339	67520	-	AK291862|BLVRA|644|biliverdin reductase A##X93086|BLVRA|644|biliverdin reductase A##U34877|BLVRA|644|biliverdin reductase A##NM_000712|BLVRA|644|biliverdin reductase A##NM_001253823|BLVRA|644|biliverdin reductase A##BC005902|BLVRA|644|biliverdin reductase A##BC008456|BLVRA|644|biliverdin reductase A##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44##AF161453|MRPS24|64951|mitochondrial ribosomal protein S24##BC012167|MRPS24|64951|mitochondrial ribosomal protein S24##BC054865|MRPS24|64951|mitochondrial ribosomal protein S24##NM_032014|MRPS24|64951|mitochondrial ribosomal protein S24##AB040940|URGCP|55665|upregulator of cell proliferation##AY078404|URGCP|55665|upregulator of cell proliferation##BC018426|URGCP|55665|upregulator of cell proliferation##BX640797|URGCP|55665|upregulator of cell proliferation##BX648505|URGCP|55665|upregulator of cell proliferation##AK314339|URGCP|55665|upregulator of cell proliferation	1.908273	CTCF.p2:-34:0.973	CTCF.p2:34:0.935
chr8	27323262	27323363	reg1003563.p1	13.318	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-140235	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-140260	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-140295	+	AK314787 U62431 NM_000742	13459	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	25346	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	148893	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	1.013883	CTCF.p2:-16:0.999
chr10	43957424	43957568	reg1005952.p1	13.317	+	AK302442 TSC_hg19_v1_chr10_+_43932667	-24876	+	TSC_hg19_v1_chr10_-_43904631 BC015580 BC004254 AK296696 NM_004966 NM_001098204	-52850	-	TSC_hg19_v1_chr10_-_43904306 AK001364 NM_001098205	-53178	-	NM_005674 X82125	106410	-	BC026030 X82128 AK292013 NM_001099282 NM_001099283 NM_001099284	112540	-	AK074679 AK299707 NM_145312 TSC_hg19_v1_chr10_+_44101877 BC014161	144370	+	AK302442|ZNF487P|642819|zinc finger protein 487, pseudogene##BC015580|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##BC004254|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##AK296696|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_004966|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_001098204|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##AK001364|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_001098205|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_005674|ZNF239|8187|zinc finger protein 239##X82125|ZNF239|8187|zinc finger protein 239##BC026030|ZNF239|8187|zinc finger protein 239##X82128|ZNF239|8187|zinc finger protein 239##AK292013|ZNF239|8187|zinc finger protein 239##NM_001099282|ZNF239|8187|zinc finger protein 239##NM_001099283|ZNF239|8187|zinc finger protein 239##NM_001099284|ZNF239|8187|zinc finger protein 239##AK074679|ZNF485|220992|zinc finger protein 485##AK299707|ZNF485|220992|zinc finger protein 485##NM_145312|ZNF485|220992|zinc finger protein 485##BC014161|ZNF485|220992|zinc finger protein 485	0.978037	CTCF.p2:32:0.978
chr14	32721392	32721533	reg1005352.p1	13.317	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-174956	+	TSC_hg19_v1_chr14_+_32546223 BC075799	-175217	+	TSC_hg19_v1_chr14_+_32546174 BC050059	-175283	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	77074	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	687028	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	1698687	-	NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##BC050059|ARHGAP5|394|Rho GTPase activating protein 5##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)	0.394061	CTCF.p2:18:0.394
chr19	49578250	49578354	reg1004429.p1	13.316	+	TSC_hg19_v1_chr19_-_49576120 AJ310479 NM_031886	-2144	-	AF315818 TSC_hg19_v1_chr19_-_49575943 BC140906	-2368	-	NM_006179 BC012421	-11179	-	TSC_hg19_v1_chr19_+_49588418 NM_003089	10150	+	TSC_hg19_v1_chr19_+_49588682 AK293120	10369	+	TSC_hg19_v1_chr19_+_49588707 X06817 AK096783	10394	+	AJ310479|KCNA7|3743|potassium voltage-gated channel, shaker-related subfamily, member 7##NM_031886|KCNA7|3743|potassium voltage-gated channel, shaker-related subfamily, member 7##AF315818|KCNA7|3743|potassium voltage-gated channel, shaker-related subfamily, member 7##BC140906|KCNA7|3743|potassium voltage-gated channel, shaker-related subfamily, member 7##NM_006179|NTF4|4909|neurotrophin 4##BC012421|NTF4|4909|neurotrophin 4##NM_003089|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##AK293120|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##X06817|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##AK096783|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)	0.830069	CTCF.p2:-6:0.830
chr13	59892594	59892694	reg1004204.p1	13.315	+	TSC_hg19_v1_chr13_+_58207858 AK307545	-1684748	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	-1686697	+	NM_001040429	-1686856	+	BC041395 TSC_hg19_v1_chr13_-_60325215	432500	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	694676	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	845337	-	AK307545|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##NM_001040429|PCDH17|27253|protocadherin 17##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	0.953808	CTCF.p2:9:0.954
chr1	99947076	99947188	reg1003951.p1	13.315	+	TSC_hg19_v1_chr1_+_99730067 AF357013 AK300361	-217047	+	AF541281 NM_001166252 NM_014839 AB007924 AK056665 AY304518 AB384482 BC042963 TSC_hg19_v1_chr1_+_99730047 AK291369 AK297417	-217182	+	BC040174 AK295688 BC140086 BC143086 AY634620 BC136350 BC144000 AY574039 FJ472844 NM_001010861 NM_001037317	-476820	-	NM_017734 AF262379 AL390971 AJ312214 BC012570 AK000278 AL390973	164435	+	AK131302 NM_001013660	284216	-	TSC_hg19_v1_chr1_+_100315653 NM_000642 U84007	368511	+	AF357013|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK300361|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##BC040174|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AK295688|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC140086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC143086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY634620|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC136350|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC144000|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY574039|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##FJ472844|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001010861|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001037317|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_017734|PALMD|54873|palmdelphin##AF262379|PALMD|54873|palmdelphin##AL390971|PALMD|54873|palmdelphin##AJ312214|PALMD|54873|palmdelphin##BC012570|PALMD|54873|palmdelphin##AK000278|PALMD|54873|palmdelphin##AL390973|PALMD|54873|palmdelphin##AK131302|FRRS1|391059|ferric-chelate reductase 1##NM_001013660|FRRS1|391059|ferric-chelate reductase 1##NM_000642|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##U84007|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	0.992455	CTCF.p2:11:0.992
chr3	129817258	129817383	reg1005997.p1	13.315	+	NM_001136152 BC127755	-16582	+	NM_007117 TSC_hg19_v1_chr3_+_129693145	-124191	+	TSC_hg19_v1_chr3_+_129612705 AK127796	-204602	+	TSC_hg19_v1_chr3_-_129830276 BC083497	12975	-	TSC_hg19_v1_chr3_-_129830331 BC071676	13029	-	EU085556 NM_153264 AM906078	247098	+	NM_001136152|ALG1L2|644974|asparagine-linked glycosylation 1-like 2##NM_007117|TRH|7200|thyrotropin-releasing hormone##AK127796|LOC100507032|100507032|uncharacterized LOC100507032##EU085556|COL6A5|256076|collagen, type VI, alpha 5##NM_153264|COL6A5|256076|collagen, type VI, alpha 5##AM906078|COL6A5|256076|collagen, type VI, alpha 5	1.568177	CTCF.p2:-17:0.581	CTCF.p2:20:0.987
chr17	16819417	16819552	reg1005841.p1	13.314	+	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-225880	+	AK131401 NM_020787	-262323	-	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-346988	-	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	55920	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	126480	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	290129	-	EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6	0.870653	CTCF.p2:-1:0.871
chr16	8754946	8755054	reg1004403.p1	13.312	+	TSC_hg19_v1_chr16_+_8715563 NM_024109 AK315383 BC001908 AK022495	-39460	+	AF094849 AF109106 AF229057 NM_145891 NM_145892 NM_145893	-1372250	+	AK001027 NM_001142334	-1931191	+	TSC_hg19_v1_chr16_+_8768473 NM_020686 BX537362 AK096146 BC031413 BC015628	13462	+	NM_000663 TSC_hg19_v1_chr16_+_8806841 BC013965	51835	+	TSC_hg19_v1_chr16_+_8807190 AK054834	52202	+	NM_024109|METTL22|79091|methyltransferase like 22##AK315383|METTL22|79091|methyltransferase like 22##BC001908|METTL22|79091|methyltransferase like 22##AK022495|METTL22|79091|methyltransferase like 22##AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_020686|ABAT|18|4-aminobutyrate aminotransferase##BX537362|ABAT|18|4-aminobutyrate aminotransferase##AK096146|ABAT|18|4-aminobutyrate aminotransferase##BC031413|ABAT|18|4-aminobutyrate aminotransferase##BC015628|ABAT|18|4-aminobutyrate aminotransferase##NM_000663|ABAT|18|4-aminobutyrate aminotransferase##BC013965|ABAT|18|4-aminobutyrate aminotransferase##AK054834|ABAT|18|4-aminobutyrate aminotransferase	0.96331	CTCF.p2:-8:0.963
chr6	70545714	70545868	reg1006611.p1	13.312	+	TSC_hg19_v1_chr6_-_70506885 BC047073 NM_018368	-38846	-	AF113224 TSC_hg19_v1_chr6_-_70506799 BC010360 AK225537 AK002102 AK225187	-39004	-	TSC_hg19_v1_chr6_-_70506524 AK290069	-39263	-	D38163 NM_001858 AK310621 BC070177 BC113362 BC113364	30672	+	AK309023 TSC_hg19_v1_chr6_+_70577418	31571	+	X54413 BC008620 BC063646 NM_078485	447041	-	BC047073|LMBRD1|55788|LMBR1 domain containing 1##NM_018368|LMBRD1|55788|LMBR1 domain containing 1##AF113224|LMBRD1|55788|LMBR1 domain containing 1##BC010360|LMBRD1|55788|LMBR1 domain containing 1##AK225537|LMBRD1|55788|LMBR1 domain containing 1##AK002102|LMBRD1|55788|LMBR1 domain containing 1##AK225187|LMBRD1|55788|LMBR1 domain containing 1##AK290069|LMBRD1|55788|LMBR1 domain containing 1##D38163|COL19A1|1310|collagen, type XIX, alpha 1##NM_001858|COL19A1|1310|collagen, type XIX, alpha 1##AK310621|COL19A1|1310|collagen, type XIX, alpha 1##BC070177|COL19A1|1310|collagen, type XIX, alpha 1##BC113362|COL19A1|1310|collagen, type XIX, alpha 1##BC113364|COL19A1|1310|collagen, type XIX, alpha 1##X54413|COL9A1|1297|collagen, type IX, alpha 1##BC008620|COL9A1|1297|collagen, type IX, alpha 1##BC063646|COL9A1|1297|collagen, type IX, alpha 1##NM_078485|COL9A1|1297|collagen, type IX, alpha 1	0.94966	CTCF.p2:-64:0.950
chr1	110075022	110075155	reg1004676.p1	13.311	+	TSC_hg19_v1_chr1_-_110052350 BC040879 AK295678 NM_020703	-22754	-	NM_001134402 AK126707 NM_001134400 NM_001134403 NM_001134404 NM_182580 TSC_hg19_v1_chr1_+_110036712 AK299086 BX647509 AK096354 AK303546 BC093683 BC111999 BC143308 AK294992 AK128798	-38392	+	TSC_hg19_v1_chr1_+_110026580 BC036849 NM_153340	-48542	+	AK290027 NM_031936 AF258342	7412	+	NM_006496 TSC_hg19_v1_chr1_+_110091203	16112	+	TSC_hg19_v1_chr1_+_110091227 BC025285	16137	+	BC040879|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK295678|AMIGO1|57463|adhesion molecule with Ig-like domain 1##NM_020703|AMIGO1|57463|adhesion molecule with Ig-like domain 1##NM_001134402|CYB561D1|284613|cytochrome b-561 domain containing 1##AK126707|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134400|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134403|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134404|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_182580|CYB561D1|284613|cytochrome b-561 domain containing 1##AK299086|CYB561D1|284613|cytochrome b-561 domain containing 1##BX647509|CYB561D1|284613|cytochrome b-561 domain containing 1##AK096354|CYB561D1|284613|cytochrome b-561 domain containing 1##AK303546|CYB561D1|284613|cytochrome b-561 domain containing 1##BC093683|CYB561D1|284613|cytochrome b-561 domain containing 1##BC111999|CYB561D1|284613|cytochrome b-561 domain containing 1##BC143308|CYB561D1|284613|cytochrome b-561 domain containing 1##AK294992|CYB561D1|284613|cytochrome b-561 domain containing 1##AK128798|CYB561D1|284613|cytochrome b-561 domain containing 1##BC036849|ATXN7L2|127002|ataxin 7-like 2##NM_153340|ATXN7L2|127002|ataxin 7-like 2##AK290027|GPR61|83873|G protein-coupled receptor 61##NM_031936|GPR61|83873|G protein-coupled receptor 61##AF258342|GPR61|83873|G protein-coupled receptor 61##NM_006496|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##BC025285|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3	0.997976	CTCF.p2:5:0.998
chr14	91643819	91643957	reg1006473.p1	13.311	+	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-62861	+	AK123532 TSC_hg19_v1_chr14_+_91580717 BC065558 BX248782 AK091394 AK022564	-63139	+	TSC_hg19_v1_chr14_+_91580472 AK023200	-63376	+	BC128536 NM_001177676	66963	-	BC098567 NM_003485	76306	-	TSC_hg19_v1_chr14_-_91884159 AF070587	240260	-	NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AK123532|C14orf159|80017|chromosome 14 open reading frame 159##BC065558|C14orf159|80017|chromosome 14 open reading frame 159##BX248782|C14orf159|80017|chromosome 14 open reading frame 159##AK091394|C14orf159|80017|chromosome 14 open reading frame 159##AK022564|C14orf159|80017|chromosome 14 open reading frame 159##AK023200|C14orf159|80017|chromosome 14 open reading frame 159##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##AF070587|CCDC88C|440193|coiled-coil domain containing 88C	0.0	
chr11	69703434	69703571	reg1005931.p1	13.310	+	NM_005247	-69311	-	M17446 NM_002007	-113332	-	AF110400 AY358302 NM_005117	-184397	-	AY728143 NM_018043 TSC_hg19_v1_chr11_+_69924473	220938	+	NM_003824 TSC_hg19_v1_chr11_+_70049420 AK291005 AK293320 BC000334 X84709 U24231 BC025733 EU176185 AB587588 AY423721 BT006927 CR456738	345914	+	TSC_hg19_v1_chr11_+_70116795 NM_003626 NM_177423	413302	+	NM_005247|FGF3|2248|fibroblast growth factor 3##M17446|FGF4|2249|fibroblast growth factor 4##NM_002007|FGF4|2249|fibroblast growth factor 4##AF110400|FGF19|9965|fibroblast growth factor 19##AY358302|FGF19|9965|fibroblast growth factor 19##NM_005117|FGF19|9965|fibroblast growth factor 19##AY728143|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_018043|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_003824|FADD|8772|Fas (TNFRSF6)-associated via death domain##AK291005|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC000334|FADD|8772|Fas (TNFRSF6)-associated via death domain##X84709|FADD|8772|Fas (TNFRSF6)-associated via death domain##U24231|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC025733|FADD|8772|Fas (TNFRSF6)-associated via death domain##EU176185|FADD|8772|Fas (TNFRSF6)-associated via death domain##AY423721|FADD|8772|Fas (TNFRSF6)-associated via death domain##BT006927|FADD|8772|Fas (TNFRSF6)-associated via death domain##CR456738|FADD|8772|Fas (TNFRSF6)-associated via death domain##NM_003626|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##NM_177423|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1	0.996687	CTCF.p2:1:0.997
chr11	127215871	127215987	reg1005624.p1	13.309	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-342624	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-345204	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-345269	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	1176034	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	1176205	-	BX640634 NM_001143820	1241523	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.998731	CTCF.p2:10:0.999
chr3	194294626	194294759	reg1004867.p1	13.309	+	TSC_hg19_v1_chr3_+_194207865 AK091527	-86890	+	NM_024524	-105725	-	NM_004488	-174698	-	TSC_hg19_v1_chr3_+_194304750 AK124168	10041	+	BX647418 TSC_hg19_v1_chr3_-_194353941 HQ258241	59234	-	BC014883 TSC_hg19_v1_chr3_-_194354101 BC130297 BC144158 BC144159 BC111485 NM_001011655 NM_001166305 NM_001166306 NM_138399	59416	-	AK091527|FLJ34208|401106|uncharacterized LOC401106##NM_024524|ATP13A3|79572|ATPase type 13A3##NM_004488|GP5|2814|glycoprotein V (platelet)##BX647418|TMEM44|93109|transmembrane protein 44##HQ258241|TMEM44|93109|transmembrane protein 44##BC014883|TMEM44|93109|transmembrane protein 44##BC130297|TMEM44|93109|transmembrane protein 44##BC144158|TMEM44|93109|transmembrane protein 44##BC144159|TMEM44|93109|transmembrane protein 44##BC111485|TMEM44|93109|transmembrane protein 44##NM_001011655|TMEM44|93109|transmembrane protein 44##NM_001166305|TMEM44|93109|transmembrane protein 44##NM_001166306|TMEM44|93109|transmembrane protein 44##NM_138399|TMEM44|93109|transmembrane protein 44	0.048428	
chr4	58293084	58293215	reg1004500.p1	13.309	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-316581	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-316617	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-316750	-	TSC_hg19_v1_chr4_+_62066948 AK309793	3773826	+	NM_015236	4069689	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	6981947	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.996841	CTCF.p2:-5:0.997
chr16	68479498	68479619	reg1005302.p1	13.308	+	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	-134599	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	-134732	-	TSC_hg19_v1_chr16_+_68298430 NM_001076785 NM_003983 CR749291 CR749475 AK310866 BC028216	-181108	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	2923	-	TSC_hg19_v1_chr16_+_68564035 BC040871	84475	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	93640	+	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_001076785|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##NM_003983|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749291|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749475|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK310866|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC028216|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)	0.961864	CTCF.p2:-10:0.962
chr22	26727084	26727200	reg1004485.p1	13.308	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	-161479	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	-161645	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	-161705	+	TSC_hg19_v1_chr22_+_26825246 NM_020437 BC036753 AK315112	98182	+	AK097886 BC035614 AK054717 AL365512 NM_152841	148321	-	TSC_hg19_v1_chr22_-_26879750 AK057648 AK290211	152600	-	CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4##BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4##AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4##AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4##NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4##AK057648|HPS4|89781|Hermansky-Pudlak syndrome 4##AK290211|HPS4|89781|Hermansky-Pudlak syndrome 4	0.994487	CTCF.p2:16:0.994
chr16	31454452	31454562	reg1003337.p2	13.306	+	AK096248 NM_001136509	-161	-	DQ890561 DQ893723 M83308 BC029818 NM_005205	-14808	-	AK097160 AB208945 NM_005353 AK301028 AB384792 U37028	-49869	+	TSC_hg19_v1_chr16_+_31469624 AK295790	15050	+	TSC_hg19_v1_chr16_+_31470117 AK294897 AY217348 NM_001105247 NM_024742 BC014945	15748	+	TSC_hg19_v1_chr16_+_31470830 AK024430	16319	+	AK096248|ZNF843|283933|zinc finger protein 843##NM_001136509|ZNF843|283933|zinc finger protein 843##DQ890561|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##DQ893723|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##M83308|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##BC029818|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##NM_005205|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##AK097160|ITGAD|3681|integrin, alpha D##AB208945|ITGAD|3681|integrin, alpha D##NM_005353|ITGAD|3681|integrin, alpha D##AK301028|ITGAD|3681|integrin, alpha D##U37028|ITGAD|3681|integrin, alpha D##AK295790|ARMC5|79798|armadillo repeat containing 5##AK294897|ARMC5|79798|armadillo repeat containing 5##AY217348|ARMC5|79798|armadillo repeat containing 5##NM_001105247|ARMC5|79798|armadillo repeat containing 5##NM_024742|ARMC5|79798|armadillo repeat containing 5##BC014945|ARMC5|79798|armadillo repeat containing 5##AK024430|ARMC5|79798|armadillo repeat containing 5	0.079373	
chr2	97136422	97136542	reg1005436.p1	13.306	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-134946	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-135006	+	NM_178495 NM_001163524 BC034503	-144534	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	66003	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	167537	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	167585	-	BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_178495|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163524|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC034503|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	1.052829	CTCF.p2:-9:0.991
chr6	34131725	34131827	reg1004202.p1	13.306	+	AB385221 EU432124 HQ258665 HQ258669 U92457 BC130526 BC130528 BC144057 NM_000841 X80818 AK308669	-30374	-	BC112314 BC143981 Y00695 BC069675 NM_001040109 NM_001184698 NM_002418	-360002	-	BC039864 NM_181336 TSC_hg19_v1_chr6_-_33756906	-374866	-	NM_002131 NM_145899 NM_145903 TSC_hg19_v1_chr6_+_34204617	72835	+	TSC_hg19_v1_chr6_+_34204649 AK096863 M23616 M23617 NM_145901 NM_145902 AK301434	72874	+	TSC_hg19_v1_chr6_+_34204678 X14957 X14958 AK308245	72895	+	EU432124|GRM4|2914|glutamate receptor, metabotropic 4##HQ258665|GRM4|2914|glutamate receptor, metabotropic 4##HQ258669|GRM4|2914|glutamate receptor, metabotropic 4##U92457|GRM4|2914|glutamate receptor, metabotropic 4##BC130526|GRM4|2914|glutamate receptor, metabotropic 4##BC130528|GRM4|2914|glutamate receptor, metabotropic 4##BC144057|GRM4|2914|glutamate receptor, metabotropic 4##NM_000841|GRM4|2914|glutamate receptor, metabotropic 4##X80818|GRM4|2914|glutamate receptor, metabotropic 4##BC112314|MLN|4295|motilin##BC143981|MLN|4295|motilin##Y00695|MLN|4295|motilin##BC069675|MLN|4295|motilin##NM_001040109|MLN|4295|motilin##NM_001184698|MLN|4295|motilin##NM_002418|MLN|4295|motilin##BC039864|LEMD2|221496|LEM domain containing 2##NM_181336|LEMD2|221496|LEM domain containing 2##NM_002131|HMGA1|3159|high mobility group AT-hook 1##NM_145899|HMGA1|3159|high mobility group AT-hook 1##NM_145903|HMGA1|3159|high mobility group AT-hook 1##AK096863|HMGA1|3159|high mobility group AT-hook 1##M23616|HMGA1|3159|high mobility group AT-hook 1##M23617|HMGA1|3159|high mobility group AT-hook 1##NM_145901|HMGA1|3159|high mobility group AT-hook 1##NM_145902|HMGA1|3159|high mobility group AT-hook 1##AK301434|HMGA1|3159|high mobility group AT-hook 1##X14957|HMGA1|3159|high mobility group AT-hook 1##X14958|HMGA1|3159|high mobility group AT-hook 1##AK308245|HMGA1|3159|high mobility group AT-hook 1	0.999878	CTCF.p2:0:1.000
chr1	156627355	156627489	reg1005865.p1	13.305	+	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	-15468	+	TSC_hg19_v1_chr1_+_156611723 AY358372 NM_021948 NM_198427	-15693	+	AB049054 NM_021817 AK294131 AK310758 AK308805 AK090712 AK308980 AK293797 BC029864	-38236	+	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	19723	-	BT019827 CR450357 DQ892265 DQ896851 M68867 BC001109 AB593017 AK312007 TSC_hg19_v1_chr1_-_156675376 NM_001878 NM_001199723	48000	-	AY391837 AK022733 NM_030980	70246	-	AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##AY358372|BCAN|63827|brevican##NM_021948|BCAN|63827|brevican##NM_198427|BCAN|63827|brevican##AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin##BT019827|CRABP2|1382|cellular retinoic acid binding protein 2##CR450357|CRABP2|1382|cellular retinoic acid binding protein 2##DQ892265|CRABP2|1382|cellular retinoic acid binding protein 2##DQ896851|CRABP2|1382|cellular retinoic acid binding protein 2##M68867|CRABP2|1382|cellular retinoic acid binding protein 2##BC001109|CRABP2|1382|cellular retinoic acid binding protein 2##AB593017|CRABP2|1382|cellular retinoic acid binding protein 2##AK312007|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001878|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001199723|CRABP2|1382|cellular retinoic acid binding protein 2##AY391837|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK022733|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_030980|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2	1.012293	CTCF.p2:5:0.999
chr2	216319295	216319417	reg1005918.p1	13.305	+	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-18574	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-18836	-	AF312399 TSC_hg19_v1_chr2_-_216290008	-29384	-	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	558980	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	627188	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	627336	+	BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##AF312399|FN1|2335|fibronectin 1##AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169	0.0	
chr4	75055103	75055229	reg1004346.p1	13.305	+	TSC_hg19_v1_chr4_+_75023834 AX794782 BC037529 NM_001144978 BC041943 AX794779	-31301	+	NM_002089 TSC_hg19_v1_chr4_-_74965027	-90144	-	CR542171 CU677427 AB590957 X53799 M57731 BC015753 BC053653 TSC_hg19_v1_chr4_-_74964913 AK308504 M36820 AK311304 BC005276	-90291	-	AK289455 BC127938 BC127939 DQ235269 AY358920 NM_001013442 DQ235264 DQ235265 DQ235266 DQ235267 DQ235268	119053	+	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	175774	+	BC009799 M30704 NM_001657	255686	+	BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_002089|CXCL2|2920|chemokine (C-X-C motif) ligand 2##CR542171|CXCL2|2920|chemokine (C-X-C motif) ligand 2##X53799|CXCL2|2920|chemokine (C-X-C motif) ligand 2##M57731|CXCL2|2920|chemokine (C-X-C motif) ligand 2##BC015753|CXCL2|2920|chemokine (C-X-C motif) ligand 2##BC053653|CXCL2|2920|chemokine (C-X-C motif) ligand 2##M36820|CXCL2|2920|chemokine (C-X-C motif) ligand 2##AK289455|EPGN|255324|epithelial mitogen homolog (mouse)##BC127938|EPGN|255324|epithelial mitogen homolog (mouse)##BC127939|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235269|EPGN|255324|epithelial mitogen homolog (mouse)##AY358920|EPGN|255324|epithelial mitogen homolog (mouse)##NM_001013442|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235264|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235265|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235266|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235267|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235268|EPGN|255324|epithelial mitogen homolog (mouse)##AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin	0.951794	CTCF.p2:2:0.952
chr6	25266044	25266170	reg1005474.p1	13.305	+	TSC_hg19_v1_chr6_-_24936189 AK299047	-329924	-	AB002384 NM_014722	-354913	-	U49187 AK300138 BC001232 NM_015864	-388590	-	TSC_hg19_v1_chr6_+_25279316 BC040903	13211	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	13551	+	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	13787	+	AK299047|FAM65B|9750|family with sequence similarity 65, member B##AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A	0.999811	CTCF.p2:-10:1.000
chr16	85751601	85751709	reg1003238.p1	13.304	+	BC003186 NM_016095 TSC_hg19_v1_chr16_-_85722590	-29056	-	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	-29113	-	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	-104702	+	TSC_hg19_v1_chr16_-_85784703 NM_206967	33033	-	BT007132 CU675661 AF005888 TSC_hg19_v1_chr16_-_85833151 BC007445 BC001472 BC005886 BC020250 AK313977 NM_001142288 NM_006067	81386	-	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	81578	+	BC003186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_016095|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##NM_206967|C16orf74|404550|chromosome 16 open reading frame 74##BT007132|COX4NB|10328|COX4 neighbor##AF005888|COX4NB|10328|COX4 neighbor##BC007445|COX4NB|10328|COX4 neighbor##BC001472|COX4NB|10328|COX4 neighbor##BC005886|COX4NB|10328|COX4 neighbor##BC020250|COX4NB|10328|COX4 neighbor##AK313977|COX4NB|10328|COX4 neighbor##NM_001142288|COX4NB|10328|COX4 neighbor##NM_006067|COX4NB|10328|COX4 neighbor##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1	0.087111	
chr16	28229555	28229671	reg1006312.p1	13.303	+	TSC_hg19_v1_chr16_-_28223181 AB002368 NM_015171	-6438	-	AY026388 BC130304 BC144189 TSC_hg19_v1_chr16_-_28222816 AK123846	-6828	-	TSC_hg19_v1_chr16_-_28074776 AY358206 NM_001109763	-154811	-	TSC_hg19_v1_chr16_-_28303389 AK091456 AX746995	73765	-	TSC_hg19_v1_chr16_+_28303845 AY874862 NM_001024401	74168	+	DQ891632 DQ894822 AB527254 BC157849 BC071705 AK000739 AK293264 AY762099 TSC_hg19_v1_chr16_-_28415133 BC000533 BC001571	185428	-	AB002368|XPO6|23214|exportin 6##NM_015171|XPO6|23214|exportin 6##AY026388|XPO6|23214|exportin 6##BC130304|XPO6|23214|exportin 6##BC144189|XPO6|23214|exportin 6##AK123846|XPO6|23214|exportin 6##AY358206|GSG1L|146395|GSG1-like##NM_001109763|GSG1L|146395|GSG1-like##AY874862|SBK1|388228|SH3-binding domain kinase 1##NM_001024401|SBK1|388228|SH3-binding domain kinase 1##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C	0.343938	CTCF.p2:6:0.344
chr16	58545926	58546062	reg1005531.p1	13.303	+	AK055038 AB044944 AB044945 AK131248 AK296415 AK299949 AK316089 NM_001242833 NM_001242834 NM_001242835 NM_001242836 TSC_hg19_v1_chr16_+_58534048 BC011795 AB033006 AL136584 BC001527 AB385436 AM393094 AM393323	-11896	+	NM_022910	-47269	+	TSC_hg19_v1_chr16_+_58498222 AK126574 CR936733	-47732	+	NM_001160305 NM_024860 TSC_hg19_v1_chr16_+_58549420 AK127136 BC110433 AK304822 AK290495 AK309468 BC022451 AK024801 AK297288 AB590837 CU692624	3417	+	TSC_hg19_v1_chr16_-_58663731 BX647815	117735	-	AK300281 AK056927 BX537840 TSC_hg19_v1_chr16_-_58663736 EF553522 AL832769	117742	-	AK055038|NDRG4|65009|NDRG family member 4##AB044944|NDRG4|65009|NDRG family member 4##AB044945|NDRG4|65009|NDRG family member 4##AK131248|NDRG4|65009|NDRG family member 4##AK296415|NDRG4|65009|NDRG family member 4##AK299949|NDRG4|65009|NDRG family member 4##AK316089|NDRG4|65009|NDRG family member 4##NM_001242833|NDRG4|65009|NDRG family member 4##NM_001242834|NDRG4|65009|NDRG family member 4##NM_001242835|NDRG4|65009|NDRG family member 4##NM_001242836|NDRG4|65009|NDRG family member 4##BC011795|NDRG4|65009|NDRG family member 4##AB033006|NDRG4|65009|NDRG family member 4##AL136584|NDRG4|65009|NDRG family member 4##BC001527|NDRG4|65009|NDRG family member 4##AM393094|NDRG4|65009|NDRG family member 4##AM393323|NDRG4|65009|NDRG family member 4##NM_022910|NDRG4|65009|NDRG family member 4##AK126574|NDRG4|65009|NDRG family member 4##CR936733|NDRG4|65009|NDRG family member 4##NM_001160305|SETD6|79918|SET domain containing 6##NM_024860|SETD6|79918|SET domain containing 6##AK127136|SETD6|79918|SET domain containing 6##BC110433|SETD6|79918|SET domain containing 6##AK304822|SETD6|79918|SET domain containing 6##AK290495|SETD6|79918|SET domain containing 6##AK309468|SETD6|79918|SET domain containing 6##BC022451|SETD6|79918|SET domain containing 6##AK024801|SETD6|79918|SET domain containing 6##AK297288|SETD6|79918|SET domain containing 6##BX647815|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK300281|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK056927|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##BX537840|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##EF553522|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL832769|CNOT1|23019|CCR4-NOT transcription complex, subunit 1	0.998375	CTCF.p2:-9:0.998
chr16	68562660	68562783	reg1003876.p1	13.303	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	-80240	-	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	-217762	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	-217895	-	TSC_hg19_v1_chr16_+_68564035 BC040871	1312	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	10477	+	NM_133458	10939	+	AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)##NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)	0.810803	CTCF.p2:-15:0.811
chr18	43245206	43245317	reg1003607.p1	13.303	+	AF349446 NM_007163	-50496	+	NM_001242692 AK292422	-452309	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-984393	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	58843	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	58896	+	NM_001146037	61656	+	AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.841405	CTCF.p2:1:0.841
chr2	56410799	56410921	reg1005044.p1	13.303	+	AK293058 NM_001039348 NM_001039349	-259575	-	TSC_hg19_v1_chr2_-_56150918 AK301531 BC014410 BC098561 AK301402 AK312639 AK092854 AK290599 AX747769	-259945	-	TSC_hg19_v1_chr2_-_55920980 BC053660 BC009057 AK027437 AY027528 AK307589 AJ458465 NM_033109	-489882	-	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	345	+	AB384323 TSC_hg19_v1_chr2_+_56411776	906	+	AK311113 TSC_hg19_v1_chr2_-_56412914	2049	-	AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301531|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC014410|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC098561|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301402|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK312639|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK092854|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK290599|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC053660|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##BC009057|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AY027528|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AK307589|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AJ458465|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##NM_033109|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK311113|LOC100129434|100129434|uncharacterized LOC100129434	0.083694	
chr12	68337194	68337338	reg1006111.p1	13.302	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	-294643	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-673836	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-674094	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	216156	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	282286	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	310038	-	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22	0.831464	CTCF.p2:9:0.831
chr9	42758717	42758834	reg1005634.p1	13.300	+	NM_001099279 NM_199244	-41542	+	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	-390417	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-803861	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	374712	-	NM_001145196	871954	-	TSC_hg19_v1_chr9_+_43684876 NM_001201380	926068	+	NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B	0.228611	CTCF.p2:2:0.229
chr1	8978298	8978390	reg1003956.p1	13.299	+	AK309177 NM_001428	-39194	-	TSC_hg19_v1_chr1_-_8938746 AK223192 BX537400 AK309291 AK315417	-39582	-	BC015641 BC027725 TSC_hg19_v1_chr1_-_8938743 BC004458 BC009912 AK222517 BC022545 D28437	-39609	-	NM_001215 AK300652 BC034350 M57892 AB102863 AB103091	27589	+	AB527336 AY571960 NM_207420	108059	-	TSC_hg19_v1_chr1_-_9117554 AF451839 AF479408	139234	-	AK309177|ENO1|2023|enolase 1, (alpha)##NM_001428|ENO1|2023|enolase 1, (alpha)##AK223192|ENO1|2023|enolase 1, (alpha)##BX537400|ENO1|2023|enolase 1, (alpha)##AK309291|ENO1|2023|enolase 1, (alpha)##AK315417|ENO1|2023|enolase 1, (alpha)##BC015641|ENO1|2023|enolase 1, (alpha)##BC027725|ENO1|2023|enolase 1, (alpha)##BC004458|ENO1|2023|enolase 1, (alpha)##BC009912|ENO1|2023|enolase 1, (alpha)##AK222517|ENO1|2023|enolase 1, (alpha)##BC022545|ENO1|2023|enolase 1, (alpha)##D28437|ENO1|2023|enolase 1, (alpha)##NM_001215|CA6|765|carbonic anhydrase VI##AK300652|CA6|765|carbonic anhydrase VI##BC034350|CA6|765|carbonic anhydrase VI##M57892|CA6|765|carbonic anhydrase VI##AB102863|CA6|765|carbonic anhydrase VI##AB103091|CA6|765|carbonic anhydrase VI##AY571960|SLC2A7|155184|solute carrier family 2 (facilitated glucose transporter), member 7##NM_207420|SLC2A7|155184|solute carrier family 2 (facilitated glucose transporter), member 7##AF451839|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AF479408|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5	0.01812	
chr9	70387800	70387913	reg1005263.p1	13.299	+	NM_001126334	-209042	-	AL136793 NM_001098805	-1005876	+	AF265442 BC069006 AK293173 NM_001085457	-1125302	-	NM_001099279 NM_199244	41874	-	CU688346 TSC_hg19_v1_chr9_-_70490092	102225	-	AF265442 TSC_hg19_v1_chr9_-_70490099	102242	-	NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AF265442|CBWD5|220869|COBW domain containing 5	0.228611	CTCF.p2:-2:0.229
chr1	79142179	79142299	reg1004310.p2	13.297	+	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-26741	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	-56108	+	NM_000959 NM_001039585 AK292845 AK312816 AY485530 L24470 BC112965 AF004021	-185455	+	BC025721 AY358360 AK292894 AK313738 NM_022159	330188	-	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	2629688	+	AF104266 AF104938 AF104939 NM_012302	3123842	+	NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##NM_000959|PTGFR|5737|prostaglandin F receptor (FP)##NM_001039585|PTGFR|5737|prostaglandin F receptor (FP)##AK292845|PTGFR|5737|prostaglandin F receptor (FP)##AK312816|PTGFR|5737|prostaglandin F receptor (FP)##AY485530|PTGFR|5737|prostaglandin F receptor (FP)##L24470|PTGFR|5737|prostaglandin F receptor (FP)##BC112965|PTGFR|5737|prostaglandin F receptor (FP)##AF004021|PTGFR|5737|prostaglandin F receptor (FP)##BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.999156	CTCF.p2:-2:0.999
chr10	104343692	104343809	reg1004254.p2	13.295	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	-79931	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	-80031	+	CU674342 AM393135 DQ892689 DQ895934 AB462953 BC026016 TSC_hg19_v1_chr10_-_104262470 BC000693 Z14978 X82206 AK302072 AK312506 AK297362 AK297620 NM_005736	-81293	-	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	60534	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	130347	-	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	130595	+	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2	0.999225	CTCF.p2:0:0.999
chr14	106626954	106627119	reg1003578.p1	13.288	+	AF028103 AF028108 Z11951 FJ840130 AF460713 AF460734 DQ454527 DQ454388 DQ454699 GQ232866 DQ454529 GQ232862 GQ232892 GU552777 EF407836 AY003841 DQ454714 GU552715 GU552744 DQ454664 DQ454668 DQ454679 DQ454889 DQ523850 AF209741 FJ385398 FJ873853 GU552716 GU552740 FJ840399 FJ840405 FJ873982 FJ840136 FJ840137 FJ840146 FJ873844 FJ873859 FJ873968 AJ008185 AJ008243 DQ454505 AY003713 AY003823 AY003842 EU433861 AF103214 EF441758 AF209733 AF209739 M18511 EU099088 EU099091 EU099108 EU099125 EU099214 DQ100874 AF103360 AF103031 AF103055 AF103172 AF103027 AY062317 HM773987 JN110484 JN110743 JN110870 JN110880 JN110904 JN111065 FJ385409 FJ385427 GQ504866 HM774017 HM774087 HM774308 HM774638 HM774746 HM774912 HM774921 AF032354 AF103227 AF103255 AF082194 EU146316 EU146375 EU146379 EU146381 EU146388 EU146390 EU146391 AJ271553 AJ300806 DQ926562 L38566 AB066857 HM995144 AF035789 AF035799 AF035798 L26034 AF062296 AF062303 AF471268 DQ454900 DQ524054 HM995097 HM995098 HM995245 HM995265 HM995270 HM995272 HM995274 HM995569 HM995686 HM995688 HM995689 HM995690 HM995691 HM995692 HM995930 HM995937 HM995946 HM996125 HM996208 HM996383 HM996458 DQ322777 DQ840774 DQ840820 DQ840842 DQ840897 AJ278771 AY686927 AY866567 AY998725 DQ100923 DQ100931 DQ926186 DQ926328 DQ926496 EF178079 FJ195531 FJ195532 FJ385300 FJ385301 FJ385374 FJ385399 HM995143 L39128 X79165 AB021509 AB021517 AB021528 AB021540 AB063657 AB063800 AB063845 AB066984 AB067025 AB067128 AB363162 AB363202 AB363206 AB373605 AB373606 AB373610 AB373616 AB373630 AB373634 AF021972 AF035026 AF174091 AF471269 AF471270 AF471271 AF471274 AF471276 AF471277 AF471278 AF471279 AJ249632 AJ401163 AJ401164 AJ556720 AJ579094 AJ579101 AJ579115 AJ579140 AJ579160 AJ579180 AJ579219 AJ579227 AJ579235 AJ579263 AJ579275 AJ579285 AJ627238 AY055479 AY376081 AY971142 D83688 D83689 DQ065634 DQ535287 DQ535290 DQ535292 DQ535322 DQ535337 DQ535365 DQ535372 DQ535396 DQ535403 DQ535404 DQ926160 DQ926428 DQ926446 DQ926474 DQ926484 DQ926537 DQ926556 EF028218 EF178024 FJ195520 FJ195538 FJ385323 GU570304 HM152485 HQ689757 U97245 X62954 X62960 X87453 X99364 Y12699 Z18319 Z18322 Z18323 Z75557 Z98737 Z98738 Z98739 Z98740 AJ401161 M34023 L14818 X56523 X56524 AF431053 AF431055 Z14169 AY505570 X81723 X81743 Z14216 Z80843 L29153 L29154 Z14960 M34032 BC065820 BC014667 TSC_hg19_v1_chr14_-_106610847 AK123981 AK301228 AK130434 AK289373	-16441	-	GU552766 DQ454945 DQ454680 DQ454800 DQ100736 HQ392877 AY062313 JN110910 JN111168 L03821 L04324 FJ385334 FJ385335 HM774019 HM774079 HM774175 HM774429 HM774436 HM774460 HM774566 HM774691 HM774780 HM774984 AF165105 AY062308 DQ100831 AJ300807 AB063700 AY423173 AY062309 DQ100870 GU570344 HM994897 HM994907 HM994915 HM995019 HM995419 HM995424 HM995733 HM995761 HM995921 HM995935 HM995953 HM996087 HM996247 HM996409 DQ840731 DQ840896 AB374202 AM279603 AY866783 DQ431491 EF178033 FJ385392 GU570335 AB021538 AB063673 AB066975 AB067002 AB067017 AB067076 AB067261 AB363102 AB363150 AF062210 AF098364 AF174056 AF174100 AF174120 AF301484 AF455549 AF471257 AF471259 AF471261 AF471262 AF471264 AF471363 AF471478 AF471487 AF471497 AJ007956 AJ389180 AJ399809 AJ413989 AJ555276 AJ556639 AJ579273 AM040537 AY268370 AY466509 AY685302 AY685304 AY921574 AY921575 AY927662 AY941906 D83675 DQ065617 DQ065728 DQ535267 DQ535281 DQ535298 DQ535334 DQ535408 DQ535485 DQ926436 DQ926504 DQ926507 DQ926513 DQ926550 EF178020 GU570303 GU570338 GU570343 GU570348 L33984 S65535 Z33898 AY670714 HM995884 AF062141 L03683 L38431 X65894 X81740 M18515 BC053984 TSC_hg19_v1_chr14_-_106586668	-40535	-	DQ454787 U64487 AF460704 AF460740 AF460807 DQ454554 AL389978 FJ385400 DQ454728 DQ454993 DQ454902 GQ232943 GU552699 AY003824 AY003849 DQ454431 EF566904 AY003777 DQ454493 DQ454848 GU552714 GU552717 DQ454498 DQ454515 DQ454965 DQ523862 EF407823 DQ454754 DQ454849 DQ454990 FJ840311 FJ840313 FJ840317 FJ840329 FJ840349 FJ873842 FJ873857 FJ873909 FJ873912 FJ873925 FJ874051 FJ874081 FJ874083 FJ874089 HM116118 AY003786 EU433870 EF175391 EF175399 EF175431 EF175439 EF441746 EU433865 EU667604 EU099143 EU099237 EU099244 EU099063 EU099194 EU099113 EU099200 AM183985 AM183986 EU099292 HQ392870 AF103124 DQ100718 AF103028 AF103040 AF103322 HM774410 L07309 L07310 L07312 JN110741 L03824 L03825 L04325 HM774027 HM774097 HM774142 HM774318 HM774446 HM774453 HM774557 HM774576 HM774604 HM774628 HM774645 HM774671 HM774698 HM774809 HM774847 HM774858 HM775011 HM775058 AF165102 HM775038 HM775039 HM775042 AF082199 EU146392 EU146393 EU146395 AY376083 AY376084 AF103217 AY485363 DQ100667 DQ926397 DQ926487 AF062294 DQ187521 DQ187649 DQ523968 DQ523986 DQ524059 DQ926170 DQ926613 GU570296 GU570301 HM995316 HM995318 HM995367 HM995592 HM995658 HM995661 HM995663 HM995671 HM995696 HM995697 HM995699 HM995792 HM995793 HM995795 HM995911 HM995912 HM995913 HM995914 HM995915 HM995916 HM995917 HM995918 HM996161 HM996278 DQ187668 DQ322752 DQ322795 DQ322799 DQ322834 DQ322835 DQ322836 DQ322837 DQ322838 DQ322839 DQ322840 DQ322841 DQ322842 DQ322843 DQ322847 DQ322848 DQ322849 DQ322850 DQ322851 DQ322852 DQ322853 DQ322854 DQ322907 DQ322908 DQ322924 DQ322985 DQ322986 DQ322987 DQ840668 DQ840696 DQ840724 DQ840738 DQ840869 DQ840885 DQ840898 DQ840902 DQ926246 DQ926249 DQ926313 DQ926315 AB063717 AB063810 AB066882 AB066982 AB067264 AB067265 AB363130 AB363133 AB363178 AB363229 AB363239 AF234248 AJ306671 AY033239 AY033240 AY376073 AY376086 AY376088 AY422530 AY530313 AY640532 AY846271 AY971070 AY971132 AY986395 AY986402 DQ065641 DQ065715 DQ100950 DQ926227 DQ926469 DQ926491 DQ926596 EF178046 EU549734 FJ195526 GU570302 HQ378386 Z46761 AB021522 AB063668 AB363134 AB363177 AB363231 AF021996 AF035794 AF115122 AF119800 AF119801 AF119802 AF119803 AF119804 AF151704 AF174095 AF471243 AF471244 AF471245 AF471248 AF471251 AF471252 AF471253 AJ389186 AJ414018 AJ555260 AJ579155 AJ579190 AJ579223 AJ579232 AJ579237 AJ627246 AY530315 AY685254 AY971117 DQ065650 DQ100894 DQ100911 DQ205140 DQ205152 DQ212511 DQ431495 DQ535391 DQ535412 DQ535423 DQ535428 DQ840729 DQ840811 DQ926123 DQ926333 DQ926625 EF178050 EF633766 EF633767 EF633768 EF633798 FJ492898 GU570300 GU570349 S77136 U64493 U64507 U85230 U96395 X62972 X63081 X64241 X99352 X99366 Z96969 Z96970 Z97036 HM995655 HM995787 HM995788 HM995789 HM995870 L33033 X67907 AY392930 AY393153 AY393157 AY393162 L08089 AF062269 L06912 S72664 X65897 X81736 X81744 X81754 Z11959 BC090940 X61013 X61014 BC073758 AK097320 AK125582 AK130539 AK130586 AK130844 AK301403 TSC_hg19_v1_chr14_-_106573761	-53481	-	U32483 U32956 AF028093 AF028101 AF028111 FN562934 FN562935 FN562936 FN562938 FN562940 FN562941 FN562942 FN562943 FN562969 FN562970 FN562971 FN562972 FN562973 FN562974 FN562976 FN562977 FN562978 FN562979 FN562980 FN562981 FN562982 FN562983 FN564030 AY393108 GU552686 DQ926435 GU552684 GU552688 GU552757 GU552781 GU552690 AY003829 DQ454593 DQ454964 GU552735 FJ839984 FJ873855 FJ873870 FJ873978 FJ874013 HM116198 HM116220 AY003773 AY466515 EF091911 EF175403 EU667600 GQ232801 GQ232810 GQ232870 GQ232884 GQ232937 GQ232940 GU358677 DQ454763 L33029 AB063742 AB063753 AF209885 AJ007326 AY998724 EU099272 AF343408 AM279479 AM279486 AM279587 AM279589 AF103137 AF103300 AF103139 AY640542 HM774290 HM774693 HQ704036 JN111131 JN111139 JN111144 JN111184 JN111186 JN111187 JN111191 JN111197 JN111211 GQ504857 GQ504898 HM774123 HM774196 HM774674 JN110995 AY515008 HM774096 HM774295 HM774432 HM774654 HM774929 JN110663 JN110917 JN110945 JN110948 JN111032 JN111172 L04345 EF177943 FJ385330 FJ385333 FJ385428 HM774077 HM774081 HM774160 HM774325 HM774354 HM774361 HM774528 HM774594 HM774651 HM774665 HM774673 HM774683 HM774694 HM774869 HM774922 HQ704035 AF103230 AF103158 AF103095 AF103101 AF103237 AF103326 DQ926493 DQ097894 DQ097898 EF624133 EF624134 EF624137 EF624139 EU099193 EU146334 EU146384 AF103118 FJ385354 AY393014 EU099058 EU099190 HM995112 AY393019 L12067 L12070 AY393221 AY393225 AY393230 AY393244 AY393245 AY393246 AY393253 AY393261 AY393265 AY393272 AY393339 AY393362 AY393364 AY393494 AY393498 AY393507 AY393512 AY393521 AY393526 AY393527 AY393537 AY393658 AY393663 AY393681 EF177942 EF178122 AY640486 AF022009 AF062293 AF062306 AY685298 AY866751 AY941910 AY941960 DQ100669 DQ100695 DQ100823 DQ101000 DQ523958 GU570214 GU570234 GU570240 GU570244 HM994961 HM995031 HM995113 HM995115 HM995117 HM995118 HM995409 HM995411 HM995412 HM995413 HM995414 HM995415 HM995428 HM995461 HM995728 HM996035 HM996132 HM996228 HM996503 HM996531 HM996549 HQ378367 U64480 AB066989 AB067026 AB363145 AB363159 AY033251 AY033263 AY033264 AY941851 AY941917 DQ065675 DQ065679 DQ065695 DQ926155 DQ926171 DQ926203 DQ926402 DQ926411 DQ926472 DQ926480 DQ926481 DQ926483 DQ926540 DQ926542 DQ926549 EF177954 EF178002 EF178074 EF178082 EU794408 EU794435 FJ195464 FJ195469 FJ195474 FJ385305 FJ385319 FJ385363 FJ385390 FM160411 HQ378352 Z92891 AB063681 AB063682 AB063683 AB063684 AB063688 AB063689 AB063692 AB063693 AB063694 AB063695 AB063696 AB063702 AB063710 AB063718 AB063722 AB063725 AB063737 AB063738 AB063739 AB063746 AB063748 AB063786 AB063788 AB063795 AB063814 AB063816 AB063817 AB063819 AB063820 AB063821 AB063823 AB063825 AB063870 AB063904 AB063923 AB066999 AB067155 AB067156 AB067160 AB067163 AB067165 AB067171 AB067179 AB067302 AB067303 AB067332 AB067397 AF021967 AF021968 AF062199 AF062246 AF115131 AF115132 AF115133 AF115134 AF174092 AF174102 AF174123 AJ239345 AJ293739 AJ293740 AJ413994 AJ414022 AY530314 AY530319 AY971114 DQ065688 DQ100806 DQ926283 DQ926285 DQ926517 GU570230 GU570235 GU570236 GU570237 GU570238 GU570242 HM995881 HQ689758 JN158093 U00500 U00503 U00542 U00589 U64484 U77375 X61647 X91804 Z18832 Z18851 Z46855 DQ535265 DQ535277 DQ535295 DQ535369 DQ535473 EF177949 EF178045 EF178047 EF178059 EF178069 HM995648 HM995649 HM995876 AF026930 AF062147 AF062150 AF062212 AF062265 AF174028 L38435 M28136 X15611 X60504 Z14963 BC073789 BC051319 BC051328 TSC_hg19_v1_chr14_-_106642052 AK301327 AK301389 BC005951 BX640625 BX640626	14784	-	AY885219 X61021 Z14181 S55735 AY003795 DQ454455 DQ454409 AF460804 AF460662 AF460801 DQ454397 DQ100714 DQ523908 GQ232944 GQ232956 GQ232797 DQ840786 GQ232980 DQ454544 AY003853 DQ454479 DQ454535 DQ454792 DQ454854 DQ523849 DQ523895 GQ232770 GQ232955 DQ454396 DQ454585 DQ454631 DQ454654 DQ454956 DQ523905 GQ232836 AY003731 AY003716 AY003784 DQ454389 DQ454410 DQ454413 DQ454468 DQ454520 DQ454542 DQ454636 DQ454958 DQ454970 DQ523897 GQ232858 DQ454415 DQ454603 DQ454652 DQ454660 DQ454905 DQ454967 DQ454973 DQ523880 FJ694878 GQ232876 EF407825 EF407842 FJ840131 Z11947 FJ840333 FJ840335 FJ873821 FJ873823 FJ873828 FJ873833 FJ873836 FJ873860 FJ873862 FJ873874 FJ873877 FJ873883 FJ873914 FJ873942 FJ873962 FJ873970 FJ873987 FJ873990 FJ873992 FJ874005 FJ874027 FJ874036 FJ874038 FJ874063 FJ874086 AJ008226 DQ001066 AJ487489 EF091900 EF091901 EF091902 EF175385 EF407838 EF407845 EU814964 FJ694872 JF810262 JF810268 AY393066 AF209735 EU099104 EU099065 EU099101 EU099149 EU099151 EU099184 HM774293 EU099140 EU099070 EU099084 AF158380 EU099130 EU099206 EU099239 EU099243 EU099258 DQ118258 EU090051 DQ524167 EU099262 AF343414 DQ097900 EF555587 EU619977 AF103077 AF103170 AM279610 HM774182 U63212 HM995125 AF035793 AF103329 AF103330 AF103112 AF103182 AJ239379 EF555588 TSC_hg19_v1_chr14_-_106691939 HM774712 HM774761 JN110464 JN110738 JN110826 JN110827 JN110839 JN110903 JN110961 JN110967 JN111019 JN111020 JN111030 JN111035 JN111063 JN111100 JN111115 JN111156 L04329 GQ504855 GQ504939 GQ504944 GQ504967 HM774165 HM774369 HM774525 HM774602 HM774676 HM774690 HM774752 HM774770 HM774773 HM774906 HM775035 HM775044 HQ703986 HQ703987 HQ703995 HQ704026 L26905 L33025 AF103232 JN110697 AF032350 AF032352 AF103105 AJ239387 HM774240 Y14934 Y14935 Y14942 AF103145 EF624220 EU146314 EU146319 EU146378 AB266092 HM996466 DQ100899 AY423192 EF633794 EF633821 HM996470 HM996128 HM995111 AB027443 AF471507 DQ100917 DQ431609 U00572 DQ100693 DQ100840 DQ187606 DQ431612 DQ431613 DQ454842 DQ523995 DQ523997 DQ524047 DQ524062 EF633795 EF633796 HM995012 HM995014 HM995015 HM995084 HM995085 HM995086 HM995089 HM995091 HM995099 HM995100 HM995101 HM995102 HM995103 HM995104 HM995105 HM995106 HM995107 HM995108 HM995109 HM995110 HM995146 HM995147 HM995181 HM995188 HM995201 HM995278 HM995279 HM995280 HM995282 HM995284 HM995285 HM995292 HM995392 HM995530 HM995634 HM995888 HM995892 HM996033 HM996054 HM996072 HM996116 HM996119 HM996127 HM996149 HM996152 HM996173 HM996175 HM996181 HM996217 HM996257 HM996264 HM996267 HM996277 HM996341 HM996536 HM996544 DQ187628 DQ322746 DQ322747 DQ322768 DQ323029 DQ323030 DQ840720 DQ840783 DQ840784 DQ840785 DQ840787 DQ840788 DQ840789 DQ840790 DQ840792 DQ840793 DQ840794 DQ840795 DQ840796 DQ840797 DQ840817 DQ840822 DQ840837 AB453230 AJ245260 AY781807 AY866546 AY866968 AY941949 DQ005279 DQ100697 DQ100798 DQ100815 DQ100893 DQ100898 DQ100901 DQ100925 DQ100947 DQ926257 DQ926305 DQ926590 HQ378339 L19904 U21270 AB063691 AB063759 AB063908 AB066881 AB066972 AB066974 AB066976 AB066979 AB067033 AB363081 AB453231 AF044445 AF052523 AF062162 AF408719 AF455550 AF460967 AF471211 AJ001171 AJ243108 AJ271554 AJ389178 AJ389193 AJ519292 AJ555251 AJ555252 AY033254 AY033285 AY055481 AY466506 AY553643 AY553648 AY577302 AY685252 AY685253 AY846272 AY866763 AY866786 D83686 DQ005290 DQ065626 DQ065630 DQ065668 DQ065694 DQ065704 DQ212512 DQ431611 DQ535452 DQ840743 DQ840747 DQ840748 DQ840749 DQ840750 DQ840751 DQ840752 DQ840812 DQ926167 EF177948 EF177958 EF177959 EF633763 EF633764 EF633797 FJ039786 FJ039789 FJ385383 FJ481087 FJ492943 GU570307 HM152488 HM152500 HM152517 HM152520 HQ689728 S73912 U00508 U06787 U64497 U77372 X99354 Z18317 Z18324 L26898 AJ519295 HM995778 HM995962 AJ519313 HM995777 HM995779 HM995832 HM995882 HM995893 HM995902 HM995903 HM995904 HM995905	64802	-	AY392910 AY392920 AY392921 AY392925 AY392927 AJ309825 AF062121 AF062163 AF062202 Z14212 AY510104 X61023 X61235 AK098108 BC024289 TSC_hg19_v1_chr14_-_106692204 BX640874 AK027379 AK097359 AK127415 AK128635 AK129812 AK130453 BX640622 L29155	65120	-	BC065820|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC014667|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130434|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AL389978|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BC090940|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073758|IGHM|3507|immunoglobulin heavy constant mu##AK097320|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125582|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130539|IGHM|3507|immunoglobulin heavy constant mu##AK130586|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130844|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301403|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC073789|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC051328|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK301327|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301389|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC005951|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640625|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BX640626|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK098108|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK027379|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097359|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128635|IGHD|3495|immunoglobulin heavy constant delta##AK129812|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130453|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640622|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	3.965903	CTCF.p2:-23:0.973	CTCF.p2:53:0.995	CTCF.p2:-61:0.998	CTCF.p2:92:0.944
chr2	158348832	158348957	reg1005268.p1	13.288	+	L06633 AB528875 CU690346 AF068836 BC036449 TSC_hg19_v1_chr2_-_158300602 AK312753 NM_004288	-48330	-	NM_001009959 AK296477	-164738	-	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	-166610	-	TSC_hg19_v1_chr2_-_158454049 AF525679 NM_001111031	105181	-	AB590288 CU692676 DQ895570 EU176205 AF525680 AF525681 AY127050 TSC_hg19_v1_chr2_-_158485239	136304	-	BC022530 NM_001111032 NM_001111033 NM_145259 TSC_hg19_v1_chr2_-_158485400	136503	-	L06633|CYTIP|9595|cytohesin 1 interacting protein##AF068836|CYTIP|9595|cytohesin 1 interacting protein##BC036449|CYTIP|9595|cytohesin 1 interacting protein##AK312753|CYTIP|9595|cytohesin 1 interacting protein##NM_004288|CYTIP|9595|cytohesin 1 interacting protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##AF525679|ACVR1C|130399|activin A receptor, type IC##NM_001111031|ACVR1C|130399|activin A receptor, type IC##DQ895570|ACVR1C|130399|activin A receptor, type IC##EU176205|ACVR1C|130399|activin A receptor, type IC##AF525680|ACVR1C|130399|activin A receptor, type IC##AF525681|ACVR1C|130399|activin A receptor, type IC##AY127050|ACVR1C|130399|activin A receptor, type IC##BC022530|ACVR1C|130399|activin A receptor, type IC##NM_001111032|ACVR1C|130399|activin A receptor, type IC##NM_001111033|ACVR1C|130399|activin A receptor, type IC##NM_145259|ACVR1C|130399|activin A receptor, type IC	0.984718	CTCF.p2:1:0.985
chr4	99388815	99388941	reg1005097.p1	13.288	+	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	-206284	+	CU691442 BC036870 NM_174952	-324533	-	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	-2627620	+	TSC_hg19_v1_chr4_-_99579781 BC009704 AF065389 AK315723 NM_005723	190881	-	AK300982 NM_001130678 AB528981 DQ890728 DQ893903 TSC_hg19_v1_chr4_-_99850278 BC012611 BC107715 AK295083	461382	-	M15353 TSC_hg19_v1_chr4_-_99850288	461413	-	NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC009704|TSPAN5|10098|tetraspanin 5##AF065389|TSPAN5|10098|tetraspanin 5##AK315723|TSPAN5|10098|tetraspanin 5##NM_005723|TSPAN5|10098|tetraspanin 5##AK300982|EIF4E|1977|eukaryotic translation initiation factor 4E##NM_001130678|EIF4E|1977|eukaryotic translation initiation factor 4E##DQ890728|EIF4E|1977|eukaryotic translation initiation factor 4E##DQ893903|EIF4E|1977|eukaryotic translation initiation factor 4E##BC012611|EIF4E|1977|eukaryotic translation initiation factor 4E##BC107715|EIF4E|1977|eukaryotic translation initiation factor 4E##M15353|EIF4E|1977|eukaryotic translation initiation factor 4E	0.95631	CTCF.p2:-13:0.956
chr11	59052102	59052231	reg1005310.p1	13.287	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	-71759	-	TSC_hg19_v1_chr11_+_58940008 AB023154 AB385405	-112137	+	TSC_hg19_v1_chr11_+_58939648 NM_015177	-112481	+	BC140917 NM_001004729	79741	+	NM_001001954 BC136991	138270	-	BC137060 BC137061 NM_001004728	158462	+	BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1##AB023154|DTX4|23220|deltex homolog 4 (Drosophila)##NM_015177|DTX4|23220|deltex homolog 4 (Drosophila)##BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001001954|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC136991|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC137060|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1##BC137061|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1##NM_001004728|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1	0.980536	CTCF.p2:24:0.981
chr4	144404052	144404172	reg1005550.p1	13.287	+	NM_002039 NM_207123 AK289767 BC064848	-146097	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	-297987	+	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	-298048	+	TSC_hg19_v1_chr4_+_144434860 NM_003601 AK316444 AK302841 BC023144 AB010882 AK308424	30616	+	AB384709 TSC_hg19_v1_chr4_+_144435139	31002	+	TSC_hg19_v1_chr4_+_144480613 AX721285 AX721289 BC025996	76504	+	NM_002039|GAB1|2549|GRB2-associated binding protein 1##NM_207123|GAB1|2549|GRB2-associated binding protein 1##AK289767|GAB1|2549|GRB2-associated binding protein 1##BC064848|GAB1|2549|GRB2-associated binding protein 1##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##BC025996|GUSBP5|441046|glucuronidase, beta pseudogene 5	0.061026	
chr12	48936224	48936353	reg1006043.p1	13.286	+	NM_001005203	-16874	+	NM_152319	-60003	+	BC069122 NM_012404	-69841	+	AB590798 CR541987 CR542017 HQ258062 J00270 BC112316 BC112318 BC069103 NM_002289	27527	-	TSC_hg19_v1_chr12_-_49075997 AK000443 BC009746 AK094528 NM_017822	139730	-	AF045161 EF688064 TSC_hg19_v1_chr12_-_49110514 AF048730 AK290990 NM_001240	174330	-	NM_001005203|OR8S1|341568|olfactory receptor, family 8, subfamily S, member 1##NM_152319|C12orf54|121273|chromosome 12 open reading frame 54##BC069122|ANP32D|23519|acidic (leucine-rich) nuclear phosphoprotein 32 family, member D##NM_012404|ANP32D|23519|acidic (leucine-rich) nuclear phosphoprotein 32 family, member D##CR541987|LALBA|3906|lactalbumin, alpha-##CR542017|LALBA|3906|lactalbumin, alpha-##HQ258062|LALBA|3906|lactalbumin, alpha-##J00270|LALBA|3906|lactalbumin, alpha-##BC112316|LALBA|3906|lactalbumin, alpha-##BC112318|LALBA|3906|lactalbumin, alpha-##BC069103|LALBA|3906|lactalbumin, alpha-##NM_002289|LALBA|3906|lactalbumin, alpha-##AK000443|KANSL2|54934|KAT8 regulatory NSL complex subunit 2##BC009746|KANSL2|54934|KAT8 regulatory NSL complex subunit 2##AK094528|KANSL2|54934|KAT8 regulatory NSL complex subunit 2##NM_017822|KANSL2|54934|KAT8 regulatory NSL complex subunit 2##AF045161|CCNT1|904|cyclin T1##EF688064|CCNT1|904|cyclin T1##AF048730|CCNT1|904|cyclin T1##AK290990|CCNT1|904|cyclin T1##NM_001240|CCNT1|904|cyclin T1	0.483576	CTCF.p2:-4:0.484
chr12	4964745	4964859	reg1005082.p1	13.286	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	-46387	+	AJ271385 NM_017417 BC140888 BC140889	-135034	+	TSC_hg19_v1_chr12_+_4758272 NM_005002 BC015837 AF050641 AK308588 BC009311 AK291067 BC111546 L04490	-206524	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	54258	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	188317	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	576474	+	NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_005002|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC015837|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AF050641|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK308588|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC009311|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK291067|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC111546|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##L04490|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3	0.908121	CTCF.p2:0:0.908
chr12	52477314	52477432	reg1005035.p1	13.285	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	-13575	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	-13619	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	-32157	+	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	108371	-	BC117348 BC126393 BC038743 NM_001242696	127190	-	NM_005556 TSC_hg19_v1_chr12_+_52626966	149589	+	BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80##BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##NM_005556|KRT7|3855|keratin 7	0.98044	CTCF.p2:5:0.980
chr19	33634922	33635058	reg1005885.p1	13.284	+	BC031227 NM_173479 AB527326	-11954	+	BC006108 NM_018025	-63205	+	AF423421 AJ347750 DQ892111 DQ895305 TSC_hg19_v1_chr19_-_33555795 AF268032 AK098246 AK300775 AK315105 BC036447 NM_033103	-79200	-	TSC_hg19_v1_chr19_+_33685155 AK129963	50178	+	AB009462 NM_002333 BC007408 TSC_hg19_v1_chr19_+_33685676 EU176387 AK296536	50613	+	TSC_hg19_v1_chr19_+_33697959 AF085860	63006	+	BC031227|WDR88|126248|WD repeat domain 88##NM_173479|WDR88|126248|WD repeat domain 88##BC006108|GPATCH1|55094|G patch domain containing 1##NM_018025|GPATCH1|55094|G patch domain containing 1##AF423421|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AJ347750|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ892111|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ895305|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AF268032|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK098246|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK300775|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK315105|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##BC036447|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##NM_033103|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK129963|LRP3|4037|low density lipoprotein receptor-related protein 3##AB009462|LRP3|4037|low density lipoprotein receptor-related protein 3##NM_002333|LRP3|4037|low density lipoprotein receptor-related protein 3##BC007408|LRP3|4037|low density lipoprotein receptor-related protein 3##EU176387|LRP3|4037|low density lipoprotein receptor-related protein 3##AK296536|LRP3|4037|low density lipoprotein receptor-related protein 3##AF085860|LRP3|4037|low density lipoprotein receptor-related protein 3	1.196862	CTCF.p2:-7:0.753	CTCF.p2:56:0.444
chr4	57167771	57167891	reg1004427.p2	13.284	+	AK126014 NM_020722	-131471	+	AK023683 NM_025009 TSC_hg19_v1_chr4_+_56815093 BC136535 BC136536	-352740	+	TSC_hg19_v1_chr4_+_56719840 BC094751 NM_001024924 NM_018261 NM_178237 AK001755 AK027413	-447966	+	AF516672 AY422212 BC142709 TSC_hg19_v1_chr4_-_57253644 AF161436 AK303733 BC141824 AK294332 AY314787 BC015096 NM_181806 AK316296 AK304309 BX648853	85796	-	AB590152 CU678610 DQ893484 DQ896410 TSC_hg19_v1_chr4_-_57301775 AK290942 BC004200 U00238 AK222759 D13757 AK312297 NM_002703	133925	-	TSC_hg19_v1_chr4_+_57301910 NM_006452 AK294821 BC010273	134088	+	AK126014|KIAA1211|57482|KIAA1211##NM_020722|KIAA1211|57482|KIAA1211##AK023683|CEP135|9662|centrosomal protein 135kDa##NM_025009|CEP135|9662|centrosomal protein 135kDa##BC136535|CEP135|9662|centrosomal protein 135kDa##BC136536|CEP135|9662|centrosomal protein 135kDa##BC094751|EXOC1|55763|exocyst complex component 1##NM_001024924|EXOC1|55763|exocyst complex component 1##NM_018261|EXOC1|55763|exocyst complex component 1##NM_178237|EXOC1|55763|exocyst complex component 1##AK001755|EXOC1|55763|exocyst complex component 1##AK027413|EXOC1|55763|exocyst complex component 1##AF516672|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AY422212|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC142709|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AF161436|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK303733|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC141824|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK294332|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AY314787|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC015096|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##NM_181806|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK316296|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK304309|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BX648853|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##DQ893484|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##DQ896410|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##AK290942|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##BC004200|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##U00238|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##AK222759|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##D13757|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##AK312297|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##NM_002703|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##NM_006452|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase##AK294821|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase##BC010273|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase	0.838814	CTCF.p2:7:0.839
chr8	2338185	2338312	reg1006202.p1	13.284	+	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-345046	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-385340	+	TSC_hg19_v1_chr8_+_1950340 BC169332	-387896	+	AK128880 TSC_hg19_v1_chr8_-_2585966	247734	-	AY017307 TSC_hg19_v1_chr8_-_4852228	2513977	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	2514046	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##BC169332|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.998546	CTCF.p2:12:0.999
chr11	74734070	74734204	reg1005190.p1	13.283	+	TSC_hg19_v1_chr11_+_74699955 NM_006656 AK022450 AK290442 AK303540	-34173	+	TSC_hg19_v1_chr11_+_74660321 BC064957 BC106066 AB587348 CU687980 D14658	-73797	+	TSC_hg19_v1_chr11_+_74660317 BC067821	-73819	+	NM_001005285 BC136958 BC136959	66640	-	NM_001145212 NM_007256 FM209050 TSC_hg19_v1_chr11_+_74862151 AK304783 AK302492 AK290234 AK300134 AB020687 BC127254 BC041095 AB026256 AL117465	128007	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	136704	+	NM_006656|NEU3|10825|sialidase 3 (membrane sialidase)##AK022450|NEU3|10825|sialidase 3 (membrane sialidase)##AK290442|NEU3|10825|sialidase 3 (membrane sialidase)##AK303540|NEU3|10825|sialidase 3 (membrane sialidase)##BC064957|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##BC106066|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##D14658|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##BC067821|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##NM_001005285|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##BC136958|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##BC136959|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##NM_001145212|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_007256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209050|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK304783|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK302492|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK290234|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK300134|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB020687|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC127254|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC041095|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB026256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AL117465|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1	0.999195	CTCF.p2:-16:0.999
chr3	45802755	45802881	reg1005503.p1	13.283	+	TSC_hg19_v1_chr3_+_45730926 BC016559 AL136831 AK296421 AM393061 CU677647	-71883	+	TSC_hg19_v1_chr3_+_45730887 AB020658 AK301248	-71929	+	TSC_hg19_v1_chr3_+_45730846 AK291142	-71961	+	AF075260 HQ258580 AJ276207 AJ276208 BC126197 BC136431 BC144087 TSC_hg19_v1_chr3_-_45838004	35140	-	BC036073 TSC_hg19_v1_chr3_-_45838029 NM_020208 NM_022405	35212	-	TSC_hg19_v1_chr3_-_45838112 AF125107	35330	-	BC016559|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AL136831|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK296421|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AM393061|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AB020658|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK301248|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK291142|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AF075260|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##HQ258580|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##AJ276207|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##AJ276208|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC126197|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC136431|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC144087|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC036073|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_020208|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_022405|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20	0.994288	CTCF.p2:-18:0.994
chr4	76917073	76917172	reg1002232.p1	13.282	+	TSC_hg19_v1_chr4_-_76912093 BC054040 BC063797 AK300074 CR749574 BC107895 AK307540 NM_018115	-5038	-	TSC_hg19_v1_chr4_-_76878561 AF132198	-38561	-	TSC_hg19_v1_chr4_-_76862135 AB161353 AK309271 BC006388 BC011854 NM_001042402 NM_014435	-54993	-	AB590958 CU687652 BC042178 NM_002416 X72755 BC025745 AK311852 BC063122 BC095396	11509	-	NM_001130017 AK225860 AY543657 AY543658 AY543659 AY543656 U47054	15272	+	AB529178 DQ892786 DQ896033 BC010954 X02530 NM_001565	27514	-	BC054040|SDAD1|55153|SDA1 domain containing 1##BC063797|SDAD1|55153|SDA1 domain containing 1##AK300074|SDAD1|55153|SDA1 domain containing 1##CR749574|SDAD1|55153|SDA1 domain containing 1##BC107895|SDAD1|55153|SDA1 domain containing 1##AK307540|SDAD1|55153|SDA1 domain containing 1##NM_018115|SDAD1|55153|SDA1 domain containing 1##AF132198|SDAD1|55153|SDA1 domain containing 1##AB161353|NAAA|27163|N-acylethanolamine acid amidase##AK309271|NAAA|27163|N-acylethanolamine acid amidase##BC006388|NAAA|27163|N-acylethanolamine acid amidase##BC011854|NAAA|27163|N-acylethanolamine acid amidase##NM_001042402|NAAA|27163|N-acylethanolamine acid amidase##NM_014435|NAAA|27163|N-acylethanolamine acid amidase##BC042178|CXCL9|4283|chemokine (C-X-C motif) ligand 9##NM_002416|CXCL9|4283|chemokine (C-X-C motif) ligand 9##X72755|CXCL9|4283|chemokine (C-X-C motif) ligand 9##BC025745|CXCL9|4283|chemokine (C-X-C motif) ligand 9##AK311852|CXCL9|4283|chemokine (C-X-C motif) ligand 9##BC063122|CXCL9|4283|chemokine (C-X-C motif) ligand 9##BC095396|CXCL9|4283|chemokine (C-X-C motif) ligand 9##NM_001130017|ART3|419|ADP-ribosyltransferase 3##AK225860|ART3|419|ADP-ribosyltransferase 3##AY543657|ART3|419|ADP-ribosyltransferase 3##AY543658|ART3|419|ADP-ribosyltransferase 3##AY543659|ART3|419|ADP-ribosyltransferase 3##AY543656|ART3|419|ADP-ribosyltransferase 3##U47054|ART3|419|ADP-ribosyltransferase 3##DQ892786|CXCL10|3627|chemokine (C-X-C motif) ligand 10##DQ896033|CXCL10|3627|chemokine (C-X-C motif) ligand 10##BC010954|CXCL10|3627|chemokine (C-X-C motif) ligand 10##X02530|CXCL10|3627|chemokine (C-X-C motif) ligand 10##NM_001565|CXCL10|3627|chemokine (C-X-C motif) ligand 10	0.993041	CTCF.p2:-14:0.993
chr6	41286680	41286808	reg1004860.p1	13.282	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-32320	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-90676	+	AF534824 AK023755 BC125078 BC125079 AY358171 NM_024807	-117821	-	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	16822	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	227415	+	TSC_hg19_v1_chr6_+_41514342 BC052803	227593	+	DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##AF534824|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AK023755|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125078|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125079|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AY358171|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_024807|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4	1.012153	CTCF.p2:15:0.999
chr10	48691520	48691649	reg1006598.p1	13.281	+	D49492 AK315322 AK310360 BC028237 NM_004962 TSC_hg19_v1_chr10_-_48439183	-252505	-	EU446620 EU446952 BC074921 BC069643 TSC_hg19_v1_chr10_-_48416877 AF188285 NM_016204 AK314956	-274798	-	J03912 CU691778 BC039844 AB593121 M22453 NM_002900 DQ426897	-300649	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	115339	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	136025	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	136358	-	D49492|GDF10|2662|growth differentiation factor 10##AK315322|GDF10|2662|growth differentiation factor 10##AK310360|GDF10|2662|growth differentiation factor 10##BC028237|GDF10|2662|growth differentiation factor 10##NM_004962|GDF10|2662|growth differentiation factor 10##EU446620|GDF2|2658|growth differentiation factor 2##EU446952|GDF2|2658|growth differentiation factor 2##BC074921|GDF2|2658|growth differentiation factor 2##BC069643|GDF2|2658|growth differentiation factor 2##AF188285|GDF2|2658|growth differentiation factor 2##NM_016204|GDF2|2658|growth differentiation factor 2##AK314956|GDF2|2658|growth differentiation factor 2##J03912|RBP3|5949|retinol binding protein 3, interstitial##BC039844|RBP3|5949|retinol binding protein 3, interstitial##AB593121|RBP3|5949|retinol binding protein 3, interstitial##M22453|RBP3|5949|retinol binding protein 3, interstitial##NM_002900|RBP3|5949|retinol binding protein 3, interstitial##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	0.999906	CTCF.p2:6:1.000
chr10	7729358	7729487	reg1004113.p1	13.281	+	AL833203 AY238437 AB384652 TSC_hg19_v1_chr10_-_7708928 AK027375 BC142961 AY358426 AK075381 BC136439 NM_001001851 NM_030569	-20523	-	AK027831 AB075833 TSC_hg19_v1_chr10_-_7682819	-46642	-	BC004282 NM_032817	-67798	-	TSC_hg19_v1_chr10_+_7745278 NM_002216	15833	+	TSC_hg19_v1_chr10_+_7745319 AK291379	15880	+	TSC_hg19_v1_chr10_+_7745330 AK225329 AK297334 X07173	15910	+	AL833203|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AY238437|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK027375|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC142961|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AY358426|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK075381|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC136439|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_001001851|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_030569|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK027831|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AB075833|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC004282|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_032817|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_002216|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##AK291379|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##AK225329|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##AK297334|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##X07173|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2	1.036095	CTCF.p2:-6:0.626	CTCF.p2:24:0.410
chr7	106102931	106103089	reg1004193.p2	13.281	+	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	-177487	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	-177648	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	-349995	-	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	198493	-	TSC_hg19_v1_chr7_+_106505701 AK292684	402703	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	402764	+	BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1##AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74##AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	0.706649	CTCF.p2:18:0.707
chr22	46374540	46374692	reg1005284.p1	13.279	+	AF416743 NM_058238 TSC_hg19_v1_chr22_-_46373045	-1587	-	CR456568 TSC_hg19_v1_chr22_+_46067931 AK095309 CR457381 DQ893240 DQ896570	-306699	+	AK025734 TSC_hg19_v1_chr22_+_46067746 AF119662 BC007508	-306860	+	TSC_hg19_v1_chr22_+_46449736 BC036832	75108	+	AB528792 AK001807 NM_018280 TSC_hg19_v1_chr22_-_46450052	75396	-	NM_001001928 NM_005036 AY258330 TSC_hg19_v1_chr22_+_46546555 AY258328	171914	+	AF416743|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_058238|WNT7B|7477|wingless-type MMTV integration site family, member 7B##CR456568|ATXN10|25814|ataxin 10##AK095309|ATXN10|25814|ataxin 10##CR457381|ATXN10|25814|ataxin 10##DQ893240|ATXN10|25814|ataxin 10##DQ896570|ATXN10|25814|ataxin 10##AK025734|ATXN10|25814|ataxin 10##AF119662|ATXN10|25814|ataxin 10##BC007508|ATXN10|25814|ataxin 10##AK001807|C22orf26|55267|chromosome 22 open reading frame 26##NM_018280|C22orf26|55267|chromosome 22 open reading frame 26##NM_001001928|PPARA|5465|peroxisome proliferator-activated receptor alpha##NM_005036|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258330|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258328|PPARA|5465|peroxisome proliferator-activated receptor alpha	0.896451	CTCF.p2:-3:0.896
chr1	52762052	52762184	reg1006852.p1	13.278	+	AF130419 AF130420 NM_004799 NM_007323 NM_007324	-154073	+	AK027582 TSC_hg19_v1_chr1_+_52521975 BC022371 BC021004	-240120	+	BC070378 AK027750 TSC_hg19_v1_chr1_+_52521972	-240149	+	TSC_hg19_v1_chr1_-_52831829 BC039308 AK130874 NM_032449	69728	-	BC011539 AK303420 U43416 AK291909 U40152 TSC_hg19_v1_chr1_-_52870133 NM_001190818 NM_001190819 NM_004153	107982	-	TSC_hg19_v1_chr1_+_52870235 NM_032864 AK092038 AK315621 AX747327	108106	+	AF130419|ZFYVE9|9372|zinc finger, FYVE domain containing 9##AF130420|ZFYVE9|9372|zinc finger, FYVE domain containing 9##NM_004799|ZFYVE9|9372|zinc finger, FYVE domain containing 9##NM_007323|ZFYVE9|9372|zinc finger, FYVE domain containing 9##NM_007324|ZFYVE9|9372|zinc finger, FYVE domain containing 9##AK027582|BTF3L4|91408|basic transcription factor 3-like 4##BC022371|BTF3L4|91408|basic transcription factor 3-like 4##BC021004|BTF3L4|91408|basic transcription factor 3-like 4##BC070378|BTF3L4|91408|basic transcription factor 3-like 4##AK027750|BTF3L4|91408|basic transcription factor 3-like 4##BC039308|CC2D1B|200014|coiled-coil and C2 domain containing 1B##AK130874|CC2D1B|200014|coiled-coil and C2 domain containing 1B##NM_032449|CC2D1B|200014|coiled-coil and C2 domain containing 1B##BC011539|ORC1|4998|origin recognition complex, subunit 1##AK303420|ORC1|4998|origin recognition complex, subunit 1##U43416|ORC1|4998|origin recognition complex, subunit 1##AK291909|ORC1|4998|origin recognition complex, subunit 1##U40152|ORC1|4998|origin recognition complex, subunit 1##NM_001190818|ORC1|4998|origin recognition complex, subunit 1##NM_001190819|ORC1|4998|origin recognition complex, subunit 1##NM_004153|ORC1|4998|origin recognition complex, subunit 1##NM_032864|PRPF38A|84950|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A##AK092038|PRPF38A|84950|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A##AK315621|PRPF38A|84950|PRP38 pre-mRNA processing factor 38 (yeast) domain containing A	0.990761	CTCF.p2:6:0.991
chr17	57824336	57824471	reg1006238.p1	13.277	+	TSC_hg19_v1_chr17_+_57785080 AK293664	-39330	+	AK294854 TSC_hg19_v1_chr17_+_57785025 AF214006 AX775965	-39368	+	BC009758 TSC_hg19_v1_chr17_+_57785014 AK024969	-39387	+	TSC_hg19_v1_chr17_+_57915291 AK310806	90903	+	AK024096 AK298492 AK301312 BC000258 AK022771 AK315172 NM_001193609 NM_001193610 NM_001193611 NM_001193612 NM_001193613 NM_016261	145788	-	NM_003161 BC036033 TSC_hg19_v1_chr17_+_57970481 AK293247	146059	+	AK293664|VMP1|81671|vacuole membrane protein 1##AK294854|VMP1|81671|vacuole membrane protein 1##AF214006|VMP1|81671|vacuole membrane protein 1##AX775965|VMP1|81671|vacuole membrane protein 1##BC009758|VMP1|81671|vacuole membrane protein 1##AK024969|VMP1|81671|vacuole membrane protein 1##AK024096|TUBD1|51174|tubulin, delta 1##AK298492|TUBD1|51174|tubulin, delta 1##AK301312|TUBD1|51174|tubulin, delta 1##BC000258|TUBD1|51174|tubulin, delta 1##AK022771|TUBD1|51174|tubulin, delta 1##AK315172|TUBD1|51174|tubulin, delta 1##NM_001193609|TUBD1|51174|tubulin, delta 1##NM_001193610|TUBD1|51174|tubulin, delta 1##NM_001193611|TUBD1|51174|tubulin, delta 1##NM_001193612|TUBD1|51174|tubulin, delta 1##NM_001193613|TUBD1|51174|tubulin, delta 1##NM_016261|TUBD1|51174|tubulin, delta 1##NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	0.992399	CTCF.p2:-11:0.992
chr2	201567991	201568131	reg1006610.p1	13.277	+	AK297930 AK307738 TSC_hg19_v1_chr2_+_201474048	-94064	+	AB046692 NM_001159 TSC_hg19_v1_chr2_+_201450748 BC117179 BC117181	-117277	+	TSC_hg19_v1_chr2_+_201450590 AK301052	-117474	+	TSC_hg19_v1_chr2_+_201676291 NM_001207067 NM_014670 AL833518	108225	+	TSC_hg19_v1_chr2_+_201676632 Z70221 AK096489	108553	+	D13630 TSC_hg19_v1_chr2_+_201676645 BC001804	108585	+	AK297930|AOX1|316|aldehyde oxidase 1##AK307738|AOX1|316|aldehyde oxidase 1##AB046692|AOX1|316|aldehyde oxidase 1##NM_001159|AOX1|316|aldehyde oxidase 1##BC117179|AOX1|316|aldehyde oxidase 1##BC117181|AOX1|316|aldehyde oxidase 1##AK301052|AOX1|316|aldehyde oxidase 1##NM_001207067|BZW1|9689|basic leucine zipper and W2 domains 1##NM_014670|BZW1|9689|basic leucine zipper and W2 domains 1##AL833518|BZW1|9689|basic leucine zipper and W2 domains 1##Z70221|BZW1|9689|basic leucine zipper and W2 domains 1##AK096489|BZW1|9689|basic leucine zipper and W2 domains 1##D13630|BZW1|9689|basic leucine zipper and W2 domains 1##BC001804|BZW1|9689|basic leucine zipper and W2 domains 1	0.362736	CTCF.p2:9:0.363
chr7	24358075	24358197	reg1005133.p1	13.277	+	BC029497 NM_000905 AK312156 K01911 M15789	-34293	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-608220	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	-638313	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	254952	+	TSC_hg19_v1_chr7_-_24797042 BC099911	438901	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	438931	-	BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5	0.012394	
chr8	100370895	100371019	reg1005296.p1	13.277	+	TSC_hg19_v1_chr8_+_100025537 BC094749	-345367	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	-345445	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	-345462	+	TSC_hg19_v1_chr8_-_100905892 X13238	534922	-	TSC_hg19_v1_chr8_-_100905910 AK311791	534964	-	NM_004374	535284	-	BC094749|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##X13238|COX6C|1345|cytochrome c oxidase subunit VIc##AK311791|COX6C|1345|cytochrome c oxidase subunit VIc##NM_004374|COX6C|1345|cytochrome c oxidase subunit VIc	0.936209	CTCF.p2:5:0.936
chr8	2186166	2186292	reg1006120.p1	13.277	+	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-193027	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-233321	+	TSC_hg19_v1_chr8_+_1950340 BC169332	-235877	+	AK128880 TSC_hg19_v1_chr8_-_2585966	399753	-	AY017307 TSC_hg19_v1_chr8_-_4852228	2665996	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	2666065	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##BC169332|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.998546	CTCF.p2:-12:0.999
chr6	120063472	120063595	reg1004286.p1	13.276	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-392612	-	BX538186 AK091682 AX747126 NM_001100411	-593187	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-663625	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	1592110	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	1693292	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	2657162	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.864836	CTCF.p2:-8:0.865
chr17	65370855	65371003	reg1005193.p1	13.275	+	TSC_hg19_v1_chr17_-_65362694 BC019062 AB003103 AK308883 AK307821 AK091198 AX746843 NM_002816 NM_174871	-8224	-	CU676364 AB384721 DQ892821 DQ896067 TSC_hg19_v1_chr17_-_65362658 AK222679 BC065826	-8281	-	TSC_hg19_v1_chr17_-_65241313 NM_014877	-129617	-	TSC_hg19_v1_chr17_+_65373455 BC037261	2480	+	AK290838 TSC_hg19_v1_chr17_+_65373587	2659	+	BC007905 NM_012417 NM_181671	2994	+	BC019062|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AB003103|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK308883|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK307821|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK091198|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##NM_002816|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##NM_174871|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##DQ892821|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##DQ896067|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK222679|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##BC065826|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##NM_014877|HELZ|9931|helicase with zinc finger##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1	0.997855	CTCF.p2:-1:0.998
chr2	111874715	111874834	reg1004473.p4	13.275	+	AK300513 NM_001142807 BC022268	-384595	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-438952	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-439131	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	3713	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	766852	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	766987	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.689119	CTCF.p2:-2:0.672
chr4	78124876	78124990	reg1004011.p1	13.275	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-45440	+	TSC_hg19_v1_chr4_+_78078398 U47414	-46473	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	-46572	+	AF044197 NM_006419	307972	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	615611	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	658981	+	L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1	0.091716	
chr6	138026589	138026721	reg1005581.p1	13.275	+	BC051352 AK096362 NM_175747	-211130	-	TSC_hg19_v1_chr6_-_137540556 NM_000416	-486097	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-486110	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	161882	+	TSC_hg19_v1_chr6_-_138189314 AK124173	162695	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	401913	-	BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector	0.026808	
chr6	143014128	143014245	reg1003512.p1	13.275	+	TSC_hg19_v1_chr6_+_142623443 BX640873	-390780	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-391117	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-503557	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	252142	-	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	367809	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	367850	+	BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1	0.050394	
chr3	138830789	138830922	reg1005815.p1	13.274	+	AK128089 NM_001134657	-67122	-	BC137146 BC137145 AK127998 NM_001013650	-91097	-	NM_001134659	-105746	-	TSC_hg19_v1_chr3_+_139062861 AF226045 NM_020191 AF063603 AK292852 BC009296 AK075436 AB208981	232035	+	TSC_hg19_v1_chr3_-_139108462 AK304219 X70476 BC000326	277589	-	TSC_hg19_v1_chr3_-_139108486 AK128561	277642	-	AK128089|PRR23C|389152|proline rich 23C##NM_001134657|PRR23C|389152|proline rich 23C##BC137146|PRR23B|389151|proline rich 23B##BC137145|PRR23B|389151|proline rich 23B##AK127998|PRR23B|389151|proline rich 23B##NM_001013650|PRR23B|389151|proline rich 23B##NM_001134659|PRR23A|729627|proline rich 23A##AF226045|MRPS22|56945|mitochondrial ribosomal protein S22##NM_020191|MRPS22|56945|mitochondrial ribosomal protein S22##AF063603|MRPS22|56945|mitochondrial ribosomal protein S22##AK292852|MRPS22|56945|mitochondrial ribosomal protein S22##BC009296|MRPS22|56945|mitochondrial ribosomal protein S22##AK075436|MRPS22|56945|mitochondrial ribosomal protein S22##AB208981|MRPS22|56945|mitochondrial ribosomal protein S22##AK304219|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##X70476|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##BC000326|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)	0.997148	CTCF.p2:4:0.997
chr10	43601037	43601191	reg1004516.p2	13.273	+	TSC_hg19_v1_chr10_+_43572516 NM_020630 NM_020975 BC003072 BC004257 X15262 AK291807 AB384817 CU678360 CU678648 Y12528	-28511	+	TSC_hg19_v1_chr10_+_43278248 AK308420 BC043345	-322864	+	NM_014753	-323161	+	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	32828	+	BC022548 NM_145313	161252	-	BC054876 AY358584 NM_001184963 NM_173160	265976	+	NM_020630|RET|5979|ret proto-oncogene##NM_020975|RET|5979|ret proto-oncogene##BC003072|RET|5979|ret proto-oncogene##BC004257|RET|5979|ret proto-oncogene##X15262|RET|5979|ret proto-oncogene##AK291807|RET|5979|ret proto-oncogene##Y12528|RET|5979|ret proto-oncogene##AK308420|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC043345|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##NM_014753|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC022548|RASGEF1A|221002|RasGEF domain family, member 1A##NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A##BC054876|FXYD4|53828|FXYD domain containing ion transport regulator 4##AY358584|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001184963|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_173160|FXYD4|53828|FXYD domain containing ion transport regulator 4	1.004983	CTCF.p2:-7:0.995
chr6	25071124	25071244	reg1004064.p2	13.273	+	TSC_hg19_v1_chr6_-_24936189 AK299047	-135001	-	AB002384 NM_014722	-159990	-	U49187 AK300138 BC001232 NM_015864	-193667	-	TSC_hg19_v1_chr6_+_25279316 BC040903	208134	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	208474	+	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	208710	+	AK299047|FAM65B|9750|family with sequence similarity 65, member B##AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A	0.094428	
chr8	145597531	145597665	reg1005134.p1	13.273	+	TSC_hg19_v1_chr8_+_145582272 NM_024531 BC002917	-15303	+	TSC_hg19_v1_chr8_+_145582251 NM_001253816 AK027888 AK021918 AK291581 NM_001253815	-15366	+	TSC_hg19_v1_chr8_-_145582133 AK026541 AK223088 NM_012162 NM_024555 BC033066	-15428	-	TSC_hg19_v1_chr8_+_145597730 NM_174922 BC032402 AK092773 AX747720	132	+	TSC_hg19_v1_chr8_+_145597750 BC101659 BC143322 BC143326	162	+	CU677871 DQ893479 DQ896356 AB590264 AK293601 TSC_hg19_v1_chr8_-_145634711 BC028197 BC017232 U37012	37031	-	NM_024531|GPR172A|79581|G protein-coupled receptor 172A##BC002917|GPR172A|79581|G protein-coupled receptor 172A##NM_001253816|GPR172A|79581|G protein-coupled receptor 172A##AK027888|GPR172A|79581|G protein-coupled receptor 172A##AK021918|GPR172A|79581|G protein-coupled receptor 172A##AK291581|GPR172A|79581|G protein-coupled receptor 172A##NM_001253815|GPR172A|79581|G protein-coupled receptor 172A##AK026541|FBXL6|26233|F-box and leucine-rich repeat protein 6##AK223088|FBXL6|26233|F-box and leucine-rich repeat protein 6##NM_012162|FBXL6|26233|F-box and leucine-rich repeat protein 6##NM_024555|FBXL6|26233|F-box and leucine-rich repeat protein 6##BC033066|FBXL6|26233|F-box and leucine-rich repeat protein 6##NM_174922|ADCK5|203054|aarF domain containing kinase 5##BC032402|ADCK5|203054|aarF domain containing kinase 5##AK092773|ADCK5|203054|aarF domain containing kinase 5##BC101659|ADCK5|203054|aarF domain containing kinase 5##BC143322|ADCK5|203054|aarF domain containing kinase 5##BC143326|ADCK5|203054|aarF domain containing kinase 5##DQ893479|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa##DQ896356|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa##AK293601|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa##BC028197|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa##BC017232|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa##U37012|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa	0.354281	CTCF.p2:4:0.354
chr11	17752691	17752814	reg1004460.p2	13.271	+	NM_002478 AK314968 TSC_hg19_v1_chr11_+_17741117 BC000353 X56677 BC064493 AB463907 BT007157	-11533	+	CU677569 TSC_hg19_v1_chr11_-_17565964 AK290788 AK300936 AB018687 BC016057 AF039699 AF039700 AK225614 NM_005709 NM_153676	-186835	-	TSC_hg19_v1_chr11_-_17498427 NM_000352	-254316	-	NM_001112741 NM_004976 AB529092	4767	+	TSC_hg19_v1_chr11_-_18034463 AK294022	281698	-	TSC_hg19_v1_chr11_-_18034595 AJ243950 AJ243951 BC000707 NM_012139	281811	-	NM_002478|MYOD1|4654|myogenic differentiation 1##AK314968|MYOD1|4654|myogenic differentiation 1##X56677|MYOD1|4654|myogenic differentiation 1##BC064493|MYOD1|4654|myogenic differentiation 1##BT007157|MYOD1|4654|myogenic differentiation 1##AK290788|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK300936|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AB018687|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##BC016057|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039699|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039700|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK225614|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_005709|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_153676|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_000352|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##AK294022|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243950|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243951|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC000707|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##NM_012139|SERGEF|26297|secretion regulating guanine nucleotide exchange factor	0.9996	CTCF.p2:2:1.000
chr3	138634908	138635025	reg1003333.p3	13.271	+	AB384841 BC114432 NM_006219 S67334	-156782	-	AK001444 NM_018147	-307048	+	NM_001033030 NM_001033031 NM_001033032 TSC_hg19_v1_chr3_+_138327638 BC012478	-307350	+	BC062549 NM_023067	31015	-	AK125319 NM_001040061	31109	+	NM_001134659	90143	-	BC114432|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##NM_006219|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##S67334|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##AK001444|FAIM|55179|Fas apoptotic inhibitory molecule##NM_018147|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033030|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033031|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033032|FAIM|55179|Fas apoptotic inhibitory molecule##BC012478|FAIM|55179|Fas apoptotic inhibitory molecule##BC062549|FOXL2|668|forkhead box L2##NM_023067|FOXL2|668|forkhead box L2##AK125319|C3orf72|401089|chromosome 3 open reading frame 72##NM_001040061|C3orf72|401089|chromosome 3 open reading frame 72##NM_001134659|PRR23A|729627|proline rich 23A	0.997574	CTCF.p2:14:0.998
chr6	46378196	46378328	reg1006064.p1	13.271	+	NM_005822	-84634	-	D83407 TSC_hg19_v1_chr6_-_46293410 BC038509	-84855	-	CU691584 DQ891658 DQ894845 AK312392 TSC_hg19_v1_chr6_-_46293389	-84959	-	TSC_hg19_v1_chr6_-_46459031 AY034086 AK090990 AX746721 NM_001251974	80772	-	AY034085 NM_001251973	81494	-	AK307986 CU679677 DQ892889 EU176719 AF237982 AK301604 BC034323 BC012548 AK292263 BC010358 NM_016593	242113	-	NM_005822|RCAN2|10231|regulator of calcineurin 2##D83407|RCAN2|10231|regulator of calcineurin 2##BC038509|RCAN2|10231|regulator of calcineurin 2##DQ891658|RCAN2|10231|regulator of calcineurin 2##DQ894845|RCAN2|10231|regulator of calcineurin 2##AK312392|RCAN2|10231|regulator of calcineurin 2##AY034086|RCAN2|10231|regulator of calcineurin 2##AK090990|RCAN2|10231|regulator of calcineurin 2##NM_001251974|RCAN2|10231|regulator of calcineurin 2##AY034085|RCAN2|10231|regulator of calcineurin 2##NM_001251973|RCAN2|10231|regulator of calcineurin 2##AK307986|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##DQ892889|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##EU176719|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##AF237982|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##AK301604|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##BC034323|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##BC012548|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##AK292263|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##BC010358|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##NM_016593|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1	0.869107	CTCF.p2:8:0.869
chr7	45013474	45013607	reg1005935.p1	13.271	+	AB464680 TSC_hg19_v1_chr7_-_44924953 AY039216 NM_033224 BC101735 BC101737	-88571	-	TSC_hg19_v1_chr7_-_44887698 NM_012412 NM_138635 NM_201436 NM_201516 NM_201517	-125814	-	TSC_hg19_v1_chr7_-_44887667 AK023973	-125871	-	AB463131 TSC_hg19_v1_chr7_-_45018615 AK074050	5047	-	BC113544 BC117241 TSC_hg19_v1_chr7_-_45018675 AB290179 AL832302	5122	-	BC063854 TSC_hg19_v1_chr7_-_45018705 AK097912 NM_033054	5157	-	AY039216|PURB|5814|purine-rich element binding protein B##NM_033224|PURB|5814|purine-rich element binding protein B##BC101735|PURB|5814|purine-rich element binding protein B##BC101737|PURB|5814|purine-rich element binding protein B##NM_012412|H2AFV|94239|H2A histone family, member V##NM_138635|H2AFV|94239|H2A histone family, member V##NM_201436|H2AFV|94239|H2A histone family, member V##NM_201516|H2AFV|94239|H2A histone family, member V##NM_201517|H2AFV|94239|H2A histone family, member V##AK023973|H2AFV|94239|H2A histone family, member V##AK074050|MYO1G|64005|myosin IG##BC113544|MYO1G|64005|myosin IG##BC117241|MYO1G|64005|myosin IG##AB290179|MYO1G|64005|myosin IG##AL832302|MYO1G|64005|myosin IG##BC063854|MYO1G|64005|myosin IG##AK097912|MYO1G|64005|myosin IG##NM_033054|MYO1G|64005|myosin IG	0.777326	CTCF.p2:-2:0.777
chr6	36063065	36063178	reg1004847.p1	13.270	+	TSC_hg19_v1_chr6_+_35995587 BC000092 BC031574 L35264	-67465	+	AK303414 TSC_hg19_v1_chr6_+_35995584	-67538	+	TSC_hg19_v1_chr6_+_35995536 AK291709 L35263	-67576	+	NM_002754 TSC_hg19_v1_chr6_+_36098292 AK308018 BC085196 AF004709 BC000433 BC001641 BC004428 Y10488 AF092535 U93232 AF100546 AB451221 AB451344 AB463892 BT007221 CR536490 CR541687 DQ891372 DQ894551 EU832156 EU832250 AK222922	35193	+	TSC_hg19_v1_chr6_+_36164569 AB033112 NM_015695	101439	+	TSC_hg19_v1_chr6_-_36164979 BC042825	101863	-	BC000092|MAPK14|1432|mitogen-activated protein kinase 14##BC031574|MAPK14|1432|mitogen-activated protein kinase 14##L35264|MAPK14|1432|mitogen-activated protein kinase 14##AK303414|MAPK14|1432|mitogen-activated protein kinase 14##AK291709|MAPK14|1432|mitogen-activated protein kinase 14##L35263|MAPK14|1432|mitogen-activated protein kinase 14##NM_002754|MAPK13|5603|mitogen-activated protein kinase 13##AK308018|MAPK13|5603|mitogen-activated protein kinase 13##BC085196|MAPK13|5603|mitogen-activated protein kinase 13##AF004709|MAPK13|5603|mitogen-activated protein kinase 13##BC000433|MAPK13|5603|mitogen-activated protein kinase 13##BC001641|MAPK13|5603|mitogen-activated protein kinase 13##BC004428|MAPK13|5603|mitogen-activated protein kinase 13##Y10488|MAPK13|5603|mitogen-activated protein kinase 13##AF092535|MAPK13|5603|mitogen-activated protein kinase 13##U93232|MAPK13|5603|mitogen-activated protein kinase 13##AF100546|MAPK13|5603|mitogen-activated protein kinase 13##AB451221|MAPK13|5603|mitogen-activated protein kinase 13##AB451344|MAPK13|5603|mitogen-activated protein kinase 13##BT007221|MAPK13|5603|mitogen-activated protein kinase 13##CR536490|MAPK13|5603|mitogen-activated protein kinase 13##CR541687|MAPK13|5603|mitogen-activated protein kinase 13##DQ891372|MAPK13|5603|mitogen-activated protein kinase 13##DQ894551|MAPK13|5603|mitogen-activated protein kinase 13##EU832156|MAPK13|5603|mitogen-activated protein kinase 13##EU832250|MAPK13|5603|mitogen-activated protein kinase 13##AK222922|MAPK13|5603|mitogen-activated protein kinase 13##AB033112|BRPF3|27154|bromodomain and PHD finger containing, 3##NM_015695|BRPF3|27154|bromodomain and PHD finger containing, 3	0.999685	CTCF.p2:13:1.000
chr6	42866734	42866859	reg1004458.p2	13.270	+	HQ257974 TSC_hg19_v1_chr6_-_42858560 BC060325 BC051007 BC073804 BC094854 NM_001008739	-8235	-	TSC_hg19_v1_chr6_+_42847644 AK291310 AK299816 AK021904 AK091341 AK291949 AK297324 BC058020 BC073890 NM_198486 CU687268 EU832458 EU832540	-19144	+	TSC_hg19_v1_chr6_+_42847388 BC064519 S81578 BC036861	-19399	+	NM_001243168 NM_001243169 NM_001243170 NM_138296 U36759 BC069336 BC100771 BC100772 BC100773 BC100774 BC153829 AK130819 AK312223 AK303523 AF101436 AF165312 U38996	16987	+	NM_006586 BC004423 U80744 BC011767 AY358960	30124	+	TSC_hg19_v1_chr6_+_42897217 BC008133	30413	+	HQ257974|C6orf226|441150|chromosome 6 open reading frame 226##BC060325|C6orf226|441150|chromosome 6 open reading frame 226##BC051007|C6orf226|441150|chromosome 6 open reading frame 226##BC073804|C6orf226|441150|chromosome 6 open reading frame 226##BC094854|C6orf226|441150|chromosome 6 open reading frame 226##NM_001008739|C6orf226|441150|chromosome 6 open reading frame 226##AK291310|RPL7L1|285855|ribosomal protein L7-like 1##AK299816|RPL7L1|285855|ribosomal protein L7-like 1##AK021904|RPL7L1|285855|ribosomal protein L7-like 1##AK291949|RPL7L1|285855|ribosomal protein L7-like 1##BC058020|RPL7L1|285855|ribosomal protein L7-like 1##BC073890|RPL7L1|285855|ribosomal protein L7-like 1##NM_198486|RPL7L1|285855|ribosomal protein L7-like 1##EU832458|RPL7L1|285855|ribosomal protein L7-like 1##EU832540|RPL7L1|285855|ribosomal protein L7-like 1##BC064519|RPL7L1|285855|ribosomal protein L7-like 1##BC036861|RPL7L1|285855|ribosomal protein L7-like 1##NM_001243168|PTCRA|171558|pre T-cell antigen receptor alpha##NM_001243169|PTCRA|171558|pre T-cell antigen receptor alpha##NM_001243170|PTCRA|171558|pre T-cell antigen receptor alpha##NM_138296|PTCRA|171558|pre T-cell antigen receptor alpha##U36759|PTCRA|171558|pre T-cell antigen receptor alpha##BC069336|PTCRA|171558|pre T-cell antigen receptor alpha##BC100771|PTCRA|171558|pre T-cell antigen receptor alpha##BC100772|PTCRA|171558|pre T-cell antigen receptor alpha##BC100773|PTCRA|171558|pre T-cell antigen receptor alpha##BC100774|PTCRA|171558|pre T-cell antigen receptor alpha##BC153829|PTCRA|171558|pre T-cell antigen receptor alpha##AK130819|PTCRA|171558|pre T-cell antigen receptor alpha##AK312223|PTCRA|171558|pre T-cell antigen receptor alpha##AF101436|PTCRA|171558|pre T-cell antigen receptor alpha##AF165312|PTCRA|171558|pre T-cell antigen receptor alpha##U38996|PTCRA|171558|pre T-cell antigen receptor alpha##NM_006586|CNPY3|10695|canopy 3 homolog (zebrafish)##BC004423|CNPY3|10695|canopy 3 homolog (zebrafish)##U80744|CNPY3|10695|canopy 3 homolog (zebrafish)##BC011767|CNPY3|10695|canopy 3 homolog (zebrafish)##AY358960|CNPY3|10695|canopy 3 homolog (zebrafish)##BC008133|CNPY3|10695|canopy 3 homolog (zebrafish)	0.115652	
chr1	36615254	36615396	reg1005054.p1	13.269	+	BC007662 NM_014408 AF041432 TSC_hg19_v1_chr1_-_36615078 AK315610	-235	-	AJ224335 TSC_hg19_v1_chr1_-_36615058 AY007139	-289	-	AK074129 BC096295 BC096296 BC096297 BC099645 NM_005202	-49476	-	TSC_hg19_v1_chr1_+_36621723 AB033013	6277	+	TSC_hg19_v1_chr1_+_36621782 BC057293 AF064852 AK096341 BC106053 NM_018067	6487	+	TSC_hg19_v1_chr1_+_36636693 AF218002 BC111428	21451	+	BC007662|TRAPPC3|27095|trafficking protein particle complex 3##NM_014408|TRAPPC3|27095|trafficking protein particle complex 3##AF041432|TRAPPC3|27095|trafficking protein particle complex 3##AK315610|TRAPPC3|27095|trafficking protein particle complex 3##AJ224335|TRAPPC3|27095|trafficking protein particle complex 3##AY007139|TRAPPC3|27095|trafficking protein particle complex 3##AK074129|COL8A2|1296|collagen, type VIII, alpha 2##BC096295|COL8A2|1296|collagen, type VIII, alpha 2##BC096296|COL8A2|1296|collagen, type VIII, alpha 2##BC096297|COL8A2|1296|collagen, type VIII, alpha 2##BC099645|COL8A2|1296|collagen, type VIII, alpha 2##NM_005202|COL8A2|1296|collagen, type VIII, alpha 2##AB033013|MAP7D1|55700|MAP7 domain containing 1##BC057293|MAP7D1|55700|MAP7 domain containing 1##AF064852|MAP7D1|55700|MAP7 domain containing 1##AK096341|MAP7D1|55700|MAP7 domain containing 1##BC106053|MAP7D1|55700|MAP7 domain containing 1##NM_018067|MAP7D1|55700|MAP7 domain containing 1##AF218002|MAP7D1|55700|MAP7 domain containing 1##BC111428|MAP7D1|55700|MAP7 domain containing 1	0.202228	CTCF.p2:-22:0.202
chr15	84403477	84403598	reg1004550.p1	13.269	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-80710	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-287309	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-287477	+	NM_001243531	437704	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	740744	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	793935	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.430563	CTCF.p2:-6:0.431
chr8	53854283	53854390	reg1004688.p2	13.268	+	BC069117 BC107101 NM_005285	-1869	+	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	-227323	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	-227350	-	BC099912 AK310407 AY168006 NM_000912 AY466378	309876	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	901343	-	AK022345 TSC_hg19_v1_chr8_-_54755834	901491	-	BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1##BC099912|OPRK1|4986|opioid receptor, kappa 1##AK310407|OPRK1|4986|opioid receptor, kappa 1##AY168006|OPRK1|4986|opioid receptor, kappa 1##NM_000912|OPRK1|4986|opioid receptor, kappa 1##AY466378|OPRK1|4986|opioid receptor, kappa 1##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H	0.973729	CTCF.p2:5:0.974
chr1	201083382	201083473	reg1003321.p1	13.267	+	L33798 NM_000069	-1734	-	TSC_hg19_v1_chr1_+_200993085 AK022893 BC037533 BC016656	-90340	+	TSC_hg19_v1_chr1_-_200992826 AB007918 NM_001252100 NM_001252102 NM_001252103 NM_017596	-90596	-	TSC_hg19_v1_chr1_-_201123569 AK091726	40144	-	AK075335 AY138587 AK296307 TSC_hg19_v1_chr1_-_201123603 BC001106 AL136600 AK054883 AK303843 NM_016456	40185	-	BC033185 NM_001164586	76525	+	L33798|CACNA1S|779|calcium channel, voltage-dependent, L type, alpha 1S subunit##NM_000069|CACNA1S|779|calcium channel, voltage-dependent, L type, alpha 1S subunit##AB007918|KIF21B|23046|kinesin family member 21B##NM_001252100|KIF21B|23046|kinesin family member 21B##NM_001252102|KIF21B|23046|kinesin family member 21B##NM_001252103|KIF21B|23046|kinesin family member 21B##NM_017596|KIF21B|23046|kinesin family member 21B##AK091726|TMEM9|252839|transmembrane protein 9##AK075335|TMEM9|252839|transmembrane protein 9##AY138587|TMEM9|252839|transmembrane protein 9##AK296307|TMEM9|252839|transmembrane protein 9##BC001106|TMEM9|252839|transmembrane protein 9##AL136600|TMEM9|252839|transmembrane protein 9##AK054883|TMEM9|252839|transmembrane protein 9##AK303843|TMEM9|252839|transmembrane protein 9##NM_016456|TMEM9|252839|transmembrane protein 9##BC033185|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##NM_001164586|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1	0.378433	CTCF.p2:6:0.378
chr16	88810326	88810430	reg1004205.p2	13.267	+	TSC_hg19_v1_chr16_+_88772910 BC121805 BC125269 NM_001012759 NM_001012762 BC157881 AK299521 BC108659 BC021056 BC063512 BC080540	-37455	+	TSC_hg19_v1_chr16_-_88772809 NM_178841	-37556	-	CU680704 HQ258016 TSC_hg19_v1_chr16_-_88772797 BC013948 AK290920 BC017226 NM_001171815	-37610	-	NM_001142864 AB384448 TSC_hg19_v1_chr16_-_88851456	41040	-	AB053172 NM_030928 TSC_hg19_v1_chr16_+_88870207	59819	+	TSC_hg19_v1_chr16_+_88870215 AF321125 BC000137 BC009410 BC008860 BC008676	59902	+	BC121805|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC125269|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_001012759|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_001012762|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC157881|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##AK299521|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC108659|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC021056|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC063512|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC080540|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_178841|RNF166|115992|ring finger protein 166##HQ258016|RNF166|115992|ring finger protein 166##BC013948|RNF166|115992|ring finger protein 166##AK290920|RNF166|115992|ring finger protein 166##BC017226|RNF166|115992|ring finger protein 166##NM_001171815|RNF166|115992|ring finger protein 166##NM_001142864|PIEZO1|9780|piezo-type mechanosensitive ion channel component 1##AB384448|PIEZO1|9780|piezo-type mechanosensitive ion channel component 1##AB053172|CDT1|81620|chromatin licensing and DNA replication factor 1##NM_030928|CDT1|81620|chromatin licensing and DNA replication factor 1##AF321125|CDT1|81620|chromatin licensing and DNA replication factor 1##BC000137|CDT1|81620|chromatin licensing and DNA replication factor 1##BC009410|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008860|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008676|CDT1|81620|chromatin licensing and DNA replication factor 1	0.993818	CTCF.p2:-3:0.994
chr4	140020663	140020793	reg1005366.p1	13.267	+	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	-15117	-	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	-15325	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	-83735	+	U43188 NM_201999	39875	-	TSC_hg19_v1_chr4_-_140098351 AK311505	77609	-	BC037987 BC104173 BC104174 AF329088 AF484960 NM_032623	180687	-	U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##U43188|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_201999|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC037987|C4orf49|84709|chromosome 4 open reading frame 49##BC104173|C4orf49|84709|chromosome 4 open reading frame 49##BC104174|C4orf49|84709|chromosome 4 open reading frame 49##AF329088|C4orf49|84709|chromosome 4 open reading frame 49##AF484960|C4orf49|84709|chromosome 4 open reading frame 49##NM_032623|C4orf49|84709|chromosome 4 open reading frame 49	0.999776	CTCF.p2:0:1.000
chr2	175411756	175411879	reg1005535.p1	13.265	+	BC036681 AK091200 AK315125 AX746845 BC028730 AL834154 TSC_hg19_v1_chr2_-_175351812 AK307896 BX537947 NM_001033045 NM_152529 BC035037	-60020	-	BC119684 BC119685 BC119685 TSC_hg19_v1_chr2_+_175260519	-151259	+	TSC_hg19_v1_chr2_+_175260466 NM_001193528 NM_024583 AK296558 AK295357 AK295357 AK057912 AK057912 BC007344	-151340	+	TSC_hg19_v1_chr2_-_175462533 BC002914 X86019	50664	-	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	87480	-	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	135937	-	BC036681|GPR155|151556|G protein-coupled receptor 155##AK091200|GPR155|151556|G protein-coupled receptor 155##AK315125|GPR155|151556|G protein-coupled receptor 155##BC028730|GPR155|151556|G protein-coupled receptor 155##AL834154|GPR155|151556|G protein-coupled receptor 155##AK307896|GPR155|151556|G protein-coupled receptor 155##BX537947|GPR155|151556|G protein-coupled receptor 155##NM_001033045|GPR155|151556|G protein-coupled receptor 155##NM_152529|GPR155|151556|G protein-coupled receptor 155##BC035037|GPR155|151556|G protein-coupled receptor 155##BC119684|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##NM_001193528|SCRN3|79634|secernin 3##NM_024583|SCRN3|79634|secernin 3##AK296558|SCRN3|79634|secernin 3##AK295357|SCRN3|79634|secernin 3##AK295357|SCRN3|79634|secernin 3##AK057912|SCRN3|79634|secernin 3##AK057912|SCRN3|79634|secernin 3##BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1##X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1##AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1	0.366911	CTCF.p2:-99:0.308
chr3	161141822	161141964	reg1005838.p1	13.265	+	AF458592 BC037817 NM_001040100	-52085	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-202772	+	AK225664 TSC_hg19_v1_chr3_+_160939097	-202797	+	NM_001080440	72702	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	3654385	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	3772612	-	AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK225664|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_001080440|OTOL1|131149|otolin 1##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3	0.998982	CTCF.p2:9:0.999
chr1	43693057	43693174	reg1003562.p1	13.264	+	TSC_hg19_v1_chr1_-_43637988 AK299476 AK295006 NM_006824 AB590504 NM_001159936	-55011	-	NM_001167965 NM_001195831 NM_152498 AK056562 TSC_hg19_v1_chr1_+_43638044 BC117280 BC117306 BC143804	-55069	+	TSC_hg19_v1_chr1_-_43637958 AK223455	-55153	-	NM_144626 BC072393	42564	+	TSC_hg19_v1_chr1_-_43736601 BC073924	43488	-	BC041633 NM_182517 NM_001164829	58147	-	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2##AK295006|EBNA1BP2|10969|EBNA1 binding protein 2##NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2##NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2##NM_001167965|WDR65|149465|WD repeat domain 65##NM_001195831|WDR65|149465|WD repeat domain 65##NM_152498|WDR65|149465|WD repeat domain 65##AK056562|WDR65|149465|WD repeat domain 65##BC117280|WDR65|149465|WD repeat domain 65##BC117306|WDR65|149465|WD repeat domain 65##BC143804|WDR65|149465|WD repeat domain 65##AK223455|EBNA1BP2|10969|EBNA1 binding protein 2##NM_144626|TMEM125|128218|transmembrane protein 125##BC072393|TMEM125|128218|transmembrane protein 125##BC073924|EBNA1BP2|10969|EBNA1 binding protein 2##BC041633|C1orf210|149466|chromosome 1 open reading frame 210##NM_182517|C1orf210|149466|chromosome 1 open reading frame 210##NM_001164829|C1orf210|149466|chromosome 1 open reading frame 210	0.999951	CTCF.p2:-1:1.000
chr21	31222154	31222269	reg1004214.p2	13.264	+	AF026199 NM_206866	-550475	+	TSC_hg19_v1_chr21_+_30671242 AK313791 BC063307	-550970	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	-550991	+	L19058 NM_000830 NM_175611 AK296404 BC028238	90078	-	BC101503 BC101505 NM_012131 AY358094	316795	-	AB590283 CU676754 DQ892002 DQ895192 BC058004 AY358707 BC020866 AK223512 AK022269 NM_199328	366144	-	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AK313791|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC063307|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##L19058|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_000830|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_175611|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##AK296404|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC028238|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC101503|CLDN17|26285|claudin 17##BC101505|CLDN17|26285|claudin 17##NM_012131|CLDN17|26285|claudin 17##AY358094|CLDN17|26285|claudin 17##DQ892002|CLDN8|9073|claudin 8##DQ895192|CLDN8|9073|claudin 8##BC058004|CLDN8|9073|claudin 8##AY358707|CLDN8|9073|claudin 8##BC020866|CLDN8|9073|claudin 8##AK223512|CLDN8|9073|claudin 8##AK022269|CLDN8|9073|claudin 8##NM_199328|CLDN8|9073|claudin 8	0.911674	CTCF.p2:1:0.895
chr1	32681350	32681459	reg1003603.p1	13.263	+	BC128073 NM_001099434 BC041458	-6709	+	NM_001160042 NM_018134 TSC_hg19_v1_chr1_+_32671269 AK223272 AK001409 AK299235 AK307853 BC098250 BC098260 BC098317 BC098366	-10137	+	AK092702 NM_024296 AK225113 BC002462 BC022848	-15178	+	TSC_hg19_v1_chr1_-_32687936 CU691608 BC004885 NM_019118 BC001256	6479	-	TSC_hg19_v1_chr1_-_32687939 AY358586	6537	-	TSC_hg19_v1_chr1_-_32687949 AK312046 AF258548 BC038842 AK295232	6557	-	BC128073|DCDC2B|149069|doublecortin domain containing 2B##NM_001099434|DCDC2B|149069|doublecortin domain containing 2B##BC041458|DCDC2B|149069|doublecortin domain containing 2B##NM_001160042|IQCC|55721|IQ motif containing C##NM_018134|IQCC|55721|IQ motif containing C##AK223272|IQCC|55721|IQ motif containing C##AK001409|IQCC|55721|IQ motif containing C##AK299235|IQCC|55721|IQ motif containing C##AK307853|IQCC|55721|IQ motif containing C##BC098250|IQCC|55721|IQ motif containing C##BC098260|IQCC|55721|IQ motif containing C##BC098317|IQCC|55721|IQ motif containing C##BC098366|IQCC|55721|IQ motif containing C##AK092702|CCDC28B|79140|coiled-coil domain containing 28B##NM_024296|CCDC28B|79140|coiled-coil domain containing 28B##AK225113|CCDC28B|79140|coiled-coil domain containing 28B##BC002462|CCDC28B|79140|coiled-coil domain containing 28B##BC022848|CCDC28B|79140|coiled-coil domain containing 28B##BC004885|TMEM234|56063|transmembrane protein 234##NM_019118|TMEM234|56063|transmembrane protein 234##BC001256|TMEM234|56063|transmembrane protein 234##AY358586|TMEM234|56063|transmembrane protein 234##AK312046|TMEM234|56063|transmembrane protein 234##AF258548|TMEM234|56063|transmembrane protein 234##BC038842|TMEM234|56063|transmembrane protein 234##AK295232|TMEM234|56063|transmembrane protein 234	1.066104	CTCF.p2:-2:0.992
chr6	109509154	109509266	reg1003671.p1	13.263	+	BC033448 NM_173830	-58704	+	TSC_hg19_v1_chr6_+_109416697 AK092723 AX747690 AK289910	-92493	+	NM_001083535 BC064365	-92853	+	AK310854 TSC_hg19_v1_chr6_-_109702904	193694	-	TSC_hg19_v1_chr6_-_109703588 AF106518 AF263279 AF299341 DQ891034 DQ894213	194365	-	TSC_hg19_v1_chr6_-_109703614 AK315908 AK298684 AK303525	194398	-	BC033448|CEP57L1|285753|centrosomal protein 57kDa-like 1##NM_173830|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK092723|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK289910|CEP57L1|285753|centrosomal protein 57kDa-like 1##NM_001083535|CEP57L1|285753|centrosomal protein 57kDa-like 1##BC064365|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK310854|CD164|8763|CD164 molecule, sialomucin##AF106518|CD164|8763|CD164 molecule, sialomucin##AF263279|CD164|8763|CD164 molecule, sialomucin##AF299341|CD164|8763|CD164 molecule, sialomucin##DQ891034|CD164|8763|CD164 molecule, sialomucin##DQ894213|CD164|8763|CD164 molecule, sialomucin##AK315908|CD164|8763|CD164 molecule, sialomucin##AK298684|CD164|8763|CD164 molecule, sialomucin##AK303525|CD164|8763|CD164 molecule, sialomucin	0.01522	
chr1	31181065	31181181	reg1005475.p1	13.260	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-1618075	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-1623676	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-1623743	-	TSC_hg19_v1_chr1_+_31191648 AK057725	10508	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	15309	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	49509	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	0.98838	CTCF.p2:15:0.988
chr22	27041361	27041499	reg1006200.p1	13.260	+	BC069404 CR456424 NM_001886 U59057 AB528112 CU012985 CU013273 BC096171 BC096172 BC096173 BC096174	-23499	+	BC036790 TSC_hg19_v1_chr22_-_27014064	-27368	-	CR456425 NM_001887 U35340 TSC_hg19_v1_chr22_-_27013992	-27447	-	TSC_hg19_v1_chr22_+_27053392 AB263414 AB263415 AB263416 AB263417 AK098833	12042	+	TSC_hg19_v1_chr22_+_27068725 AK026502	27310	+	TSC_hg19_v1_chr22_-_28197481 NM_002430 X82209	1156047	-	BC069404|CRYBA4|1413|crystallin, beta A4##CR456424|CRYBA4|1413|crystallin, beta A4##NM_001886|CRYBA4|1413|crystallin, beta A4##U59057|CRYBA4|1413|crystallin, beta A4##CU012985|CRYBA4|1413|crystallin, beta A4##CU013273|CRYBA4|1413|crystallin, beta A4##BC096171|CRYBA4|1413|crystallin, beta A4##BC096172|CRYBA4|1413|crystallin, beta A4##BC096173|CRYBA4|1413|crystallin, beta A4##BC096174|CRYBA4|1413|crystallin, beta A4##BC036790|CRYBB1|1414|crystallin, beta B1##CR456425|CRYBB1|1414|crystallin, beta B1##NM_001887|CRYBB1|1414|crystallin, beta B1##U35340|CRYBB1|1414|crystallin, beta B1##AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AK026502|LOC100507637|100507637|uncharacterized LOC100507637##NM_002430|MN1|4330|meningioma (disrupted in balanced translocation) 1##X82209|MN1|4330|meningioma (disrupted in balanced translocation) 1	0.999658	CTCF.p2:2:1.000
chr8	144513055	144513182	reg1004618.p1	13.260	+	NM_201589	-517	-	TSC_hg19_v1_chr8_+_144451016 NM_052924 BC012135 BC025767 AB528055 AY082588 CU693058 AB067516	-62028	+	AF349017 NM_052963 TSC_hg19_v1_chr8_-_144417051	-96063	-	D63484 TSC_hg19_v1_chr8_-_144623602 BC038670	110473	-	TSC_hg19_v1_chr8_-_144623640 NM_015117	110514	-	AK291817 NM_001166237	122438	+	NM_201589|MAFA|389692|v-maf musculoaponeurotic fibrosarcoma oncogene homolog A (avian)##NM_052924|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC012135|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC025767|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AY082588|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AB067516|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AF349017|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_052963|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##D63484|ZC3H3|23144|zinc finger CCCH-type containing 3##BC038670|ZC3H3|23144|zinc finger CCCH-type containing 3##NM_015117|ZC3H3|23144|zinc finger CCCH-type containing 3##AK291817|GSDMD|79792|gasdermin D##NM_001166237|GSDMD|79792|gasdermin D	0.988688	CTCF.p2:1:0.989
chr22	23285027	23285157	reg1003696.p1	13.259	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	-55009	+	TSC_hg19_v1_chr22_+_23222900 AK127411 S77601 X57802 X57803 X57816 X57818 AB369252 AF026919 AF026925 AY190825 L26400 AF490955 AF490961	-62163	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	-71399	+	TSC_hg19_v1_chr22_+_23412527 BC037333 BC026342 NM_002073	127424	+	AK312519 TSC_hg19_v1_chr22_+_23412728 AK293653	127637	+	BC008986 AF133587 NM_014433 AK299530 AK310327	199151	-	AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AB369252|CYAT1|100290481|immunoglobulin lambda light chain-like##BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3##BC037333|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC026342|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##NM_002073|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK312519|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK293653|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1##AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1##NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1	0.999925	CTCF.p2:23:1.000
chr9	14616521	14616625	reg1002836.p1	13.258	+	AK131233 NM_001190738	-217592	-	TSC_hg19_v1_chr9_-_14314141 BX648845 NM_001190737 NM_005596	-302483	-	TSC_hg19_v1_chr9_-_14313945 U70862	-302621	-	AF161360 TSC_hg19_v1_chr9_-_14693311 AK292960	76747	-	TSC_hg19_v1_chr9_-_14693475 BC042558 NM_178566	76896	-	AF400435 BC069371 BC069405 BC069491 BC069503 BC103976 BC103977 CU686794 CU686860 NM_005454	106118	-	AK131233|NFIB|4781|nuclear factor I/B##NM_001190738|NFIB|4781|nuclear factor I/B##BX648845|NFIB|4781|nuclear factor I/B##NM_001190737|NFIB|4781|nuclear factor I/B##NM_005596|NFIB|4781|nuclear factor I/B##U70862|NFIB|4781|nuclear factor I/B##AF161360|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AK292960|ZDHHC21|340481|zinc finger, DHHC-type containing 21##BC042558|ZDHHC21|340481|zinc finger, DHHC-type containing 21##NM_178566|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AF400435|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069371|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069405|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069491|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069503|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC103976|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC103977|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##NM_005454|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)	0.799912	CTCF.p2:-4:0.800
chr10	64251906	64252022	reg1003490.p1	13.257	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-117921	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-223425	-	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	-442868	+	AJ505150 NM_199452	28242	+	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	312578	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	312693	+	NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase	0.992893	CTCF.p2:-4:0.993
chr6	35995260	35995380	reg1004385.p1	13.257	+	BC025408 NM_138718 AK122928 NM_001193476 TSC_hg19_v1_chr6_-_35992359 AF331522 NM_052961	-2980	-	TSC_hg19_v1_chr6_-_35888942 NM_003137	-106373	-	TSC_hg19_v1_chr6_-_35888914 AK292277 AK299591 BC038292	-106410	-	NM_001315 NM_139012 NM_139013 NM_139014 TSC_hg19_v1_chr6_+_35995482	153	+	TSC_hg19_v1_chr6_+_35995536 AK291709 L35263	225	+	AK303414 TSC_hg19_v1_chr6_+_35995584	263	+	BC025408|SLC26A8|116369|solute carrier family 26, member 8##NM_138718|SLC26A8|116369|solute carrier family 26, member 8##AK122928|SLC26A8|116369|solute carrier family 26, member 8##NM_001193476|SLC26A8|116369|solute carrier family 26, member 8##AF331522|SLC26A8|116369|solute carrier family 26, member 8##NM_052961|SLC26A8|116369|solute carrier family 26, member 8##NM_003137|SRPK1|6732|SRSF protein kinase 1##AK292277|SRPK1|6732|SRSF protein kinase 1##AK299591|SRPK1|6732|SRSF protein kinase 1##BC038292|SRPK1|6732|SRSF protein kinase 1##NM_001315|MAPK14|1432|mitogen-activated protein kinase 14##NM_139012|MAPK14|1432|mitogen-activated protein kinase 14##NM_139013|MAPK14|1432|mitogen-activated protein kinase 14##NM_139014|MAPK14|1432|mitogen-activated protein kinase 14##AK291709|MAPK14|1432|mitogen-activated protein kinase 14##L35263|MAPK14|1432|mitogen-activated protein kinase 14##AK303414|MAPK14|1432|mitogen-activated protein kinase 14	0.0	
chr7	2249232	2249352	reg1004197.p1	13.257	+	TSC_hg19_v1_chr7_-_1980177 BC018870	-269129	-	NM_001128636	-500495	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-639471	+	AK310481 TSC_hg19_v1_chr7_-_2272542	23243	-	TSC_hg19_v1_chr7_-_2272559 AF083811	23268	-	TSC_hg19_v1_chr7_-_2272581 AK090959 AK310831 AK314227 AX746704 NM_001013836 NM_001013837 NM_003550	23288	-	BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AF083811|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK090959|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310831|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK314227|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013836|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013837|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_003550|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.991163	CTCF.p2:2:0.991
chr12	89413474	89413600	reg1005707.p1	13.256	+	BC074725 AK293002 AF119835 AF400437 BC126166 BC143899 BC069797 BC069733 BC069783 TSC_hg19_v1_chr12_-_88974249 AF400436 M59964 AK290319 NM_000899 NM_003994	-439365	-	TSC_hg19_v1_chr12_+_88536083 AK290436 AK302755 AK310375 AK310393 NM_181783 CR749309 BX538169 CR749244 CR933632 AJ697717 BC117177 BC117175	-877389	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	-877668	-	TSC_hg19_v1_chr12_+_89744716 AK124265	331215	+	TSC_hg19_v1_chr12_-_89745782 AB451265 AB451393 BT006895 CU678402 AB463588 DQ892490 DQ895701	332248	-	TSC_hg19_v1_chr12_-_89746181 BC003143 BC003562 AB013382 AB013602 X93920 AK222882	332554	-	BC074725|KITLG|4254|KIT ligand##AK293002|KITLG|4254|KIT ligand##AF119835|KITLG|4254|KIT ligand##AF400437|KITLG|4254|KIT ligand##BC126166|KITLG|4254|KIT ligand##BC143899|KITLG|4254|KIT ligand##BC069797|KITLG|4254|KIT ligand##BC069733|KITLG|4254|KIT ligand##BC069783|KITLG|4254|KIT ligand##AF400436|KITLG|4254|KIT ligand##M59964|KITLG|4254|KIT ligand##AK290319|KITLG|4254|KIT ligand##NM_000899|KITLG|4254|KIT ligand##NM_003994|KITLG|4254|KIT ligand##AK290436|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK302755|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310375|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310393|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##NM_181783|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749309|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BX538169|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749244|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR933632|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AJ697717|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117177|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117175|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa##AK124265|LOC100131490|100131490|uncharacterized LOC100131490##AB451265|DUSP6|1848|dual specificity phosphatase 6##AB451393|DUSP6|1848|dual specificity phosphatase 6##BT006895|DUSP6|1848|dual specificity phosphatase 6##DQ892490|DUSP6|1848|dual specificity phosphatase 6##DQ895701|DUSP6|1848|dual specificity phosphatase 6##BC003143|DUSP6|1848|dual specificity phosphatase 6##BC003562|DUSP6|1848|dual specificity phosphatase 6##AB013382|DUSP6|1848|dual specificity phosphatase 6##AB013602|DUSP6|1848|dual specificity phosphatase 6##X93920|DUSP6|1848|dual specificity phosphatase 6##AK222882|DUSP6|1848|dual specificity phosphatase 6	0.985524	CTCF.p2:-4:0.986
chr2	44271442	44271585	reg1004339.p1	13.256	+	TSC_hg19_v1_chr2_-_44223145 BC130285 AY289212 NM_133259	-48374	-	BC026034 TSC_hg19_v1_chr2_-_44223116	-48395	-	AK299869 TSC_hg19_v1_chr2_-_44223114 AK125781 AK290016 AK308348	-48400	-	TSC_hg19_v1_chr2_+_44396013 NM_001033556 NM_001033557 NM_002706 NM_177968 NM_177969 AK056009 AK291214 DQ023508 DQ023509 DQ023510 DQ023511 BC064381 AJ271832 AJ271835 BC012002	124502	+	TSC_hg19_v1_chr2_+_44396066 AL833035	124597	+	NM_000341 BC022386 AK309145 AK313157 AB033549 AK091932 AK289636 L11696 M95548 AK223146 BC093624 BC093626 D82326 CU692594 DQ892031 DQ895222 DQ023513 DQ023515 DQ023516 DQ023517	231122	+	BC130285|LRPPRC|10128|leucine-rich PPR-motif containing##AY289212|LRPPRC|10128|leucine-rich PPR-motif containing##NM_133259|LRPPRC|10128|leucine-rich PPR-motif containing##BC026034|LRPPRC|10128|leucine-rich PPR-motif containing##AK299869|LRPPRC|10128|leucine-rich PPR-motif containing##AK125781|LRPPRC|10128|leucine-rich PPR-motif containing##AK290016|LRPPRC|10128|leucine-rich PPR-motif containing##AK308348|LRPPRC|10128|leucine-rich PPR-motif containing##NM_001033556|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_001033557|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_002706|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177968|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177969|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK056009|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK291214|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023508|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023509|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023510|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023511|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC064381|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271832|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271835|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC012002|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AL833035|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	1.11219	CTCF.p2:-12:0.410	CTCF.p2:64:0.666
chr3	141079814	141079946	reg1004006.p1	13.256	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	-36824	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	-129194	+	AF403029 BC008324 NM_080862 AK056367	-309123	+	TSC_hg19_v1_chr3_+_141087345 AK311501	7477	+	AK311479 TSC_hg19_v1_chr3_+_141105293	25408	+	TSC_hg19_v1_chr3_+_141205882 AK292016 AK301015 AF115573 D78155 D82880 NM_006506	125991	+	BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38##AK292016|RASA2|5922|RAS p21 protein activator 2##AK301015|RASA2|5922|RAS p21 protein activator 2##AF115573|RASA2|5922|RAS p21 protein activator 2##D78155|RASA2|5922|RAS p21 protein activator 2##D82880|RASA2|5922|RAS p21 protein activator 2##NM_006506|RASA2|5922|RAS p21 protein activator 2	0.470662	CTCF.p2:-5:0.471
chr14	22942115	22942242	reg1003698.p1	13.255	+	AB463964 NM_001001912 AY726598	-808856	+	NM_001005466 AB529274 BC137371 BC137382	-839132	-	AB528817 NM_001005465	-903304	-	X58763 TSC_hg19_v1_chr14_+_22989364	47171	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	115908	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	115956	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.815927	CTCF.p2:-15:0.816
chr20	43204975	43205119	reg1006656.p1	13.253	+	NM_007066 NM_181804 NM_181805 BC104256 BC104257 TSC_hg19_v1_chr20_+_43160482 AK312048 AF182032	-44531	+	AK295120 AK309993 TSC_hg19_v1_chr20_-_43150704 NM_006811 NM_198941	-54340	-	TSC_hg19_v1_chr20_-_43150683 AF153979 U49188 AK222923	-54369	-	AK309209 TSC_hg19_v1_chr20_+_43211227	6176	+	AB528992 DQ892681 DQ895924 TSC_hg19_v1_chr20_-_43280341 X02994 AK223397	75251	-	BC007678 TSC_hg19_v1_chr20_-_43280372 BC040226 NM_000022	75328	-	NM_007066|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_181804|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_181805|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##BC104256|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##BC104257|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AK312048|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AF182032|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AK295120|SERINC3|10955|serine incorporator 3##AK309993|SERINC3|10955|serine incorporator 3##NM_006811|SERINC3|10955|serine incorporator 3##NM_198941|SERINC3|10955|serine incorporator 3##AF153979|SERINC3|10955|serine incorporator 3##U49188|SERINC3|10955|serine incorporator 3##AK222923|SERINC3|10955|serine incorporator 3##AK309209|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##DQ892681|ADA|100|adenosine deaminase##DQ895924|ADA|100|adenosine deaminase##X02994|ADA|100|adenosine deaminase##AK223397|ADA|100|adenosine deaminase##BC007678|ADA|100|adenosine deaminase##BC040226|ADA|100|adenosine deaminase##NM_000022|ADA|100|adenosine deaminase	0.713776	CTCF.p2:-3:0.714
chr7	33972603	33972722	reg1005942.p1	13.253	+	AK289963 NM_133468 AK096150 BC060868	-27520	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-803581	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-823685	-	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	725257	+	DQ287932 NM_015283	1104990	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	1253130	-	AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)	0.997108	CTCF.p2:2:0.997
chr17	4965816	4965921	reg1003632.p1	13.252	+	AB362534 AK023570 AB362533 BC060810 NM_001104577 NM_017986	-27156	-	TSC_hg19_v1_chr17_+_4901226 NM_006612 AB014606 BC034993 AK307401	-64558	+	AY601906 AY601907 NM_001167985 NM_001167986 NM_001167987 NM_213726	-64964	-	TSC_hg19_v1_chr17_+_4981751 AK055288 NM_153018	15869	+	TSC_hg19_v1_chr17_+_4981774 AK290549 BC142962 BX647638	15917	+	NM_014519 AK316369 TSC_hg19_v1_chr17_-_5026412	60536	-	AB362534|GPR172B|55065|G protein-coupled receptor 172B##AK023570|GPR172B|55065|G protein-coupled receptor 172B##AB362533|GPR172B|55065|G protein-coupled receptor 172B##BC060810|GPR172B|55065|G protein-coupled receptor 172B##NM_001104577|GPR172B|55065|G protein-coupled receptor 172B##NM_017986|GPR172B|55065|G protein-coupled receptor 172B##NM_006612|KIF1C|10749|kinesin family member 1C##AB014606|KIF1C|10749|kinesin family member 1C##BC034993|KIF1C|10749|kinesin family member 1C##AK307401|KIF1C|10749|kinesin family member 1C##AY601906|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##AY601907|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167985|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167986|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167987|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_213726|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##AK055288|ZFP3|124961|zinc finger protein 3 homolog (mouse)##NM_153018|ZFP3|124961|zinc finger protein 3 homolog (mouse)##AK290549|ZFP3|124961|zinc finger protein 3 homolog (mouse)##BC142962|ZFP3|124961|zinc finger protein 3 homolog (mouse)##BX647638|ZFP3|124961|zinc finger protein 3 homolog (mouse)##NM_014519|ZNF232|7775|zinc finger protein 232##AK316369|ZNF232|7775|zinc finger protein 232	0.230645	CTCF.p2:18:0.231
chr9	108177782	108177900	reg1003210.p1	13.251	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	-170774	+	TSC_hg19_v1_chr9_+_108006937 AJ272365	-170890	+	TSC_hg19_v1_chr9_+_108006931 NM_080546	-170928	+	AK309817 TSC_hg19_v1_chr9_+_108210342 NM_001145313 NM_031919 NM_207647 AF088031 AK299350 AK296433 AK299491 AF316830	32422	+	TSC_hg19_v1_chr9_+_108320420 NM_001079802 NM_001198963 NM_006731 AK300840 AK304460 BC058842 AB008226 AB609007	142582	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	246916	+	AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1##AJ272365|SLC44A1|23446|solute carrier family 44, member 1##NM_080546|SLC44A1|23446|solute carrier family 44, member 1##AK309817|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001145313|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_031919|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_207647|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF088031|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299350|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK296433|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299491|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF316830|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001079802|FKTN|2218|fukutin##NM_001198963|FKTN|2218|fukutin##NM_006731|FKTN|2218|fukutin##AK300840|FKTN|2218|fukutin##AK304460|FKTN|2218|fukutin##BC058842|FKTN|2218|fukutin##AB008226|FKTN|2218|fukutin##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2	1.017795	CTCF.p2:28:0.974
chr1	151566751	151566872	reg1004800.p1	13.250	+	TSC_hg19_v1_chr1_+_151512784 AF254260 NM_001126337 NM_020127 AK075001 AK299263 AK223161 AK298066 AK299925 AK315414 AL136917 AY358610 BC008301 BC002933 AB528295 AM393256 CU678909 DQ893190 DQ893683 DQ896805	-54010	+	NM_020770 AF263462 TSC_hg19_v1_chr1_+_151483892 AB037740 AK290007 BC152445 BC146657	-82915	+	TSC_hg19_v1_chr1_-_151431954 AJ242979 BX537838 NM_001194937 NM_001194938 NM_015100 NM_145796	-134880	-	TSC_hg19_v1_chr1_+_151584550 BC012184 BC101822 BC101824 BC100998 BC101000 NM_030918	17777	+	BC100999 TSC_hg19_v1_chr1_+_151584664	17852	+	TSC_hg19_v1_chr1_+_151584672 AB007957	17887	+	AF254260|TUFT1|7286|tuftelin 1##NM_001126337|TUFT1|7286|tuftelin 1##NM_020127|TUFT1|7286|tuftelin 1##AK075001|TUFT1|7286|tuftelin 1##AK299263|TUFT1|7286|tuftelin 1##AK223161|TUFT1|7286|tuftelin 1##AK298066|TUFT1|7286|tuftelin 1##AK299925|TUFT1|7286|tuftelin 1##AK315414|TUFT1|7286|tuftelin 1##AL136917|TUFT1|7286|tuftelin 1##AY358610|TUFT1|7286|tuftelin 1##BC008301|TUFT1|7286|tuftelin 1##BC002933|TUFT1|7286|tuftelin 1##AM393256|TUFT1|7286|tuftelin 1##DQ893190|TUFT1|7286|tuftelin 1##DQ893683|TUFT1|7286|tuftelin 1##DQ896805|TUFT1|7286|tuftelin 1##NM_020770|CGN|57530|cingulin##AF263462|CGN|57530|cingulin##AB037740|CGN|57530|cingulin##AK290007|CGN|57530|cingulin##BC152445|CGN|57530|cingulin##BC146657|CGN|57530|cingulin##AJ242979|POGZ|23126|pogo transposable element with ZNF domain##BX537838|POGZ|23126|pogo transposable element with ZNF domain##NM_001194937|POGZ|23126|pogo transposable element with ZNF domain##NM_001194938|POGZ|23126|pogo transposable element with ZNF domain##NM_015100|POGZ|23126|pogo transposable element with ZNF domain##NM_145796|POGZ|23126|pogo transposable element with ZNF domain##BC012184|SNX27|81609|sorting nexin family member 27##BC101822|SNX27|81609|sorting nexin family member 27##BC101824|SNX27|81609|sorting nexin family member 27##BC100998|SNX27|81609|sorting nexin family member 27##BC101000|SNX27|81609|sorting nexin family member 27##NM_030918|SNX27|81609|sorting nexin family member 27##BC100999|SNX27|81609|sorting nexin family member 27##AB007957|SNX27|81609|sorting nexin family member 27	0.999679	CTCF.p2:0:1.000
chr4	177262211	177262346	reg1005607.p1	13.249	+	TSC_hg19_v1_chr4_-_177241652 AK096223	-20647	-	TSC_hg19_v1_chr4_+_177241122 AK026302 AL136660 AY359044 BC043490 BC053883 BC047290 CU690386 EU831652 EU831735	-21110	+	TSC_hg19_v1_chr4_+_177241098 NM_021928	-21225	+	AK313879 BC035212 U58111 X94216 U43142 BC063685 NM_005429 TSC_hg19_v1_chr4_-_177713956	451532	-	TSC_hg19_v1_chr4_+_178231006 NM_018248	968715	+	TSC_hg19_v1_chr4_+_178231027 AK001720 BC025954 AK307692 AB079071	968782	+	AK026302|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AL136660|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AY359044|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC043490|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC053883|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC047290|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831652|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831735|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##NM_021928|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AK313879|VEGFC|7424|vascular endothelial growth factor C##BC035212|VEGFC|7424|vascular endothelial growth factor C##U58111|VEGFC|7424|vascular endothelial growth factor C##X94216|VEGFC|7424|vascular endothelial growth factor C##U43142|VEGFC|7424|vascular endothelial growth factor C##BC063685|VEGFC|7424|vascular endothelial growth factor C##NM_005429|VEGFC|7424|vascular endothelial growth factor C##NM_018248|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK001720|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##BC025954|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK307692|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AB079071|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)	1.112043	CTCF.p2:22:0.989
chrX	46838121	46838243	reg1005322.p1	13.249	+	TSC_hg19_v1_chrX_+_46771855 AK291220 NM_001077445 D86969 NM_014735 BC113880 BC114487 AF127774	-66247	+	TSC_hg19_v1_chrX_+_46696479 AK312555 CU692158	-141678	+	BC043348 BC053530 TSC_hg19_v1_chrX_+_46696426	-141756	+	TSC_hg19_v1_chrX_+_46937753 AK223360 NM_004683 NM_152869	99577	+	TSC_hg19_v1_chrX_+_46937812 BC050371 BC058880 AK290136	99655	+	TSC_hg19_v1_chrX_+_46937889 BC073173 AB032064	99748	+	AK291220|PHF16|9767|PHD finger protein 16##NM_001077445|PHF16|9767|PHD finger protein 16##D86969|PHF16|9767|PHD finger protein 16##NM_014735|PHF16|9767|PHD finger protein 16##BC113880|PHF16|9767|PHD finger protein 16##BC114487|PHF16|9767|PHD finger protein 16##AF127774|PHF16|9767|PHD finger protein 16##AK312555|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC043348|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC053530|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AK223360|RGN|9104|regucalcin (senescence marker protein-30)##NM_004683|RGN|9104|regucalcin (senescence marker protein-30)##NM_152869|RGN|9104|regucalcin (senescence marker protein-30)##BC050371|RGN|9104|regucalcin (senescence marker protein-30)##BC058880|RGN|9104|regucalcin (senescence marker protein-30)##AK290136|RGN|9104|regucalcin (senescence marker protein-30)##BC073173|RGN|9104|regucalcin (senescence marker protein-30)##AB032064|RGN|9104|regucalcin (senescence marker protein-30)	0.999943	CTCF.p2:-2:1.000
chr12	58225306	58225453	reg1002855.p1	13.246	+	BC111730 AF041449 NM_006576	-15534	-	NM_001172695 NM_001172696 NM_001172697 NM_005726 TSC_hg19_v1_chr12_+_58176558 AK304621 AK313453 BC022862 AK295323 AK308981 BC093068 AF110399	-48820	+	TSC_hg19_v1_chr12_+_58166438 AK024983 AK292276 AL050100 AB528834 AM393242 AM393762 CU677623	-58908	+	AB385539 AY279531 CU688100 TSC_hg19_v1_chr12_-_58240364	14914	-	TSC_hg19_v1_chr12_-_58240463 BC065920 AF022231	15076	-	TSC_hg19_v1_chr12_-_58240486 BC018922 AK310183	15100	-	BC111730|AVIL|10677|advillin##AF041449|AVIL|10677|advillin##NM_006576|AVIL|10677|advillin##NM_001172695|TSFM|10102|Ts translation elongation factor, mitochondrial##NM_001172696|TSFM|10102|Ts translation elongation factor, mitochondrial##NM_001172697|TSFM|10102|Ts translation elongation factor, mitochondrial##NM_005726|TSFM|10102|Ts translation elongation factor, mitochondrial##AK304621|TSFM|10102|Ts translation elongation factor, mitochondrial##AK313453|TSFM|10102|Ts translation elongation factor, mitochondrial##BC022862|TSFM|10102|Ts translation elongation factor, mitochondrial##AK295323|TSFM|10102|Ts translation elongation factor, mitochondrial##AK308981|TSFM|10102|Ts translation elongation factor, mitochondrial##BC093068|TSFM|10102|Ts translation elongation factor, mitochondrial##AF110399|TSFM|10102|Ts translation elongation factor, mitochondrial##AK024983|METTL21B|25895|methyltransferase like 21B##AK292276|METTL21B|25895|methyltransferase like 21B##AL050100|METTL21B|25895|methyltransferase like 21B##AM393242|METTL21B|25895|methyltransferase like 21B##AM393762|METTL21B|25895|methyltransferase like 21B##AY279531|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##BC065920|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##AF022231|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##BC018922|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##AK310183|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	0.997635	CTCF.p2:-40:0.998
chr14	61719614	61719732	reg1004813.p1	13.246	+	TSC_hg19_v1_chr14_+_61447962 BX648332 BC110378 BC064429 BX248072 AF070578 AK303839	-271618	+	TSC_hg19_v1_chr14_+_61447932 BC050349	-271737	+	NM_001172702 NM_153811 AF543422 TSC_hg19_v1_chr14_+_61447920	-271796	+	AB464738 TSC_hg19_v1_chr14_-_61747887	28204	-	BC101726 BC113559 TSC_hg19_v1_chr14_-_61747937	28252	-	TSC_hg19_v1_chr14_-_61747957 AK091169 AX746825	28292	-	BX648332|SLC38A6|145389|solute carrier family 38, member 6##BC110378|SLC38A6|145389|solute carrier family 38, member 6##BC064429|SLC38A6|145389|solute carrier family 38, member 6##BX248072|SLC38A6|145389|solute carrier family 38, member 6##AF070578|SLC38A6|145389|solute carrier family 38, member 6##AK303839|SLC38A6|145389|solute carrier family 38, member 6##BC050349|SLC38A6|145389|solute carrier family 38, member 6##NM_001172702|SLC38A6|145389|solute carrier family 38, member 6##NM_153811|SLC38A6|145389|solute carrier family 38, member 6##AF543422|SLC38A6|145389|solute carrier family 38, member 6##BC101726|TMEM30B|161291|transmembrane protein 30B##BC113559|TMEM30B|161291|transmembrane protein 30B##AK091169|TMEM30B|161291|transmembrane protein 30B	0.179116	
chr16	71446751	71446874	reg1004074.p2	13.246	+	TSC_hg19_v1_chr16_+_71392648 BC015484 X56667	-54168	+	NM_001740 NM_007088 AK222495 AK222648 AK291096 TSC_hg19_v1_chr16_+_71392625	-54191	+	BC034468 TSC_hg19_v1_chr16_-_71323306 AK226169 BX648660 AK315056 NM_001099642 AK123343 AF458590 NM_018348 BC035005	-123511	-	TSC_hg19_v1_chr16_-_71496127 AF507946 BC007256 NM_145911 BC048974 AK091039 AX746746 AK297130	49309	-	AK123826 TSC_hg19_v1_chr16_+_71496196	49376	+	AK292260 BC030658 AK057330 BC047091 NM_006961	76403	-	BC015484|CALB2|794|calbindin 2##X56667|CALB2|794|calbindin 2##NM_001740|CALB2|794|calbindin 2##NM_007088|CALB2|794|calbindin 2##AK222495|CALB2|794|calbindin 2##AK222648|CALB2|794|calbindin 2##AK291096|CALB2|794|calbindin 2##BC034468|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK226169|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BX648660|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK315056|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_001099642|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AF458590|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_018348|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BC035005|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AF507946|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC007256|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_145911|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC048974|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK091039|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK297130|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19	0.999758	CTCF.p2:-4:1.000
chr22	28990838	28990954	reg1003360.p2	13.246	+	TSC_hg19_v1_chr22_-_28315245 BC018704 D30037 AK313064 CR456541 NM_012399	-675632	-	TSC_hg19_v1_chr22_-_28315203 BC031427	-675689	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	-675722	-	TSC_hg19_v1_chr22_-_29075801 NM_001145418	84897	-	BC004207 AK289360 CR456418 NM_001005735 NM_007194 NM_145862 AK290754 AB164374	146921	-	BC000004 TSC_hg19_v1_chr22_+_29138056 NM_172002 BC065569 CR456462 AY191719 AB528150 CU013013 CU013301	147165	+	BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta##D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta##CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_001145418|TTC28|23331|tetratricopeptide repeat domain 28##BC004207|CHEK2|11200|checkpoint kinase 2##AK289360|CHEK2|11200|checkpoint kinase 2##CR456418|CHEK2|11200|checkpoint kinase 2##NM_001005735|CHEK2|11200|checkpoint kinase 2##NM_007194|CHEK2|11200|checkpoint kinase 2##NM_145862|CHEK2|11200|checkpoint kinase 2##AK290754|CHEK2|11200|checkpoint kinase 2##NM_172002|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##BC065569|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##CR456462|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##AY191719|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)	0.243556	CTCF.p2:11:0.244
chr1	55743328	55743459	reg1004726.p2	13.244	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-62309	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-62357	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-238169	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	1301626	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	1301737	-	AK312439 TSC_hg19_v1_chr1_-_57045216	1301824	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.999174	CTCF.p2:2:0.999
chr11	3870592	3870729	reg1006399.p1	13.243	+	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	-8461	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	-8505	-	NM_014489 AF159615	-40886	+	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	6269	+	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	245329	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	245406	+	X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##NM_014489|PGAP2|27315|post-GPI attachment to proteins 2##AF159615|PGAP2|27315|post-GPI attachment to proteins 2##NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1	0.717456	CTCF.p2:-4:0.717
chr20	55921573	55921696	reg1004956.p1	13.243	+	AF169385 NM_012444 NM_198265 BC033591 AF149310	-16782	+	TSC_hg19_v1_chr20_-_55841684 BC004248 NM_001719	-79946	-	EU679366 AK094784 CU678997 DQ891494 DQ894685 EU176612 AB528364 CU678634 BC008584 M60316 AK312419 AK291186 TSC_hg19_v1_chr20_-_55841286 X51801	-80439	-	NM_003610 TSC_hg19_v1_chr20_+_55926294 AK307966	4585	+	TSC_hg19_v1_chr20_+_55926310 BC103754 AK309743 AK309069 U84720 BC106923 BC106924	4688	+	AK292247 AY349350 NM_001015885	4967	+	AF169385|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_012444|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_198265|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##BC033591|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##AF149310|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##BC004248|BMP7|655|bone morphogenetic protein 7##NM_001719|BMP7|655|bone morphogenetic protein 7##EU679366|BMP7|655|bone morphogenetic protein 7##AK094784|BMP7|655|bone morphogenetic protein 7##DQ891494|BMP7|655|bone morphogenetic protein 7##DQ894685|BMP7|655|bone morphogenetic protein 7##EU176612|BMP7|655|bone morphogenetic protein 7##BC008584|BMP7|655|bone morphogenetic protein 7##M60316|BMP7|655|bone morphogenetic protein 7##AK312419|BMP7|655|bone morphogenetic protein 7##AK291186|BMP7|655|bone morphogenetic protein 7##X51801|BMP7|655|bone morphogenetic protein 7##NM_003610|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AK307966|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC103754|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AK309743|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AK309069|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##U84720|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC106923|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC106924|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)	0.998474	CTCF.p2:3:0.998
chr3	97512416	97512552	reg1004945.p1	13.243	+	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	-28884	+	AK302040 AK310249 BC031881 BC067287 AK302080 AL133666 NM_173655	-354013	+	NM_001080448 TSC_hg19_v1_chr3_+_96533435 AK092565 AX747601	-979054	+	TSC_hg19_v1_chr3_+_97540854 AK296966	28386	+	TSC_hg19_v1_chr3_-_97691261 NM_001042533 NM_032778 AK027299 DQ453796 AB083192 NM_153182	178793	-	CR749263 NM_001105580	241663	-	BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6##AK302040|EPHA6|285220|EPH receptor A6##AK310249|EPHA6|285220|EPH receptor A6##BC031881|EPHA6|285220|EPH receptor A6##BC067287|EPHA6|285220|EPH receptor A6##AK302080|EPHA6|285220|EPH receptor A6##AL133666|EPHA6|285220|EPH receptor A6##NM_173655|EPHA6|285220|EPH receptor A6##NM_001080448|EPHA6|285220|EPH receptor A6##AK092565|EPHA6|285220|EPH receptor A6##AK296966|CRYBG3|131544|beta-gamma crystallin domain containing 3##NM_001042533|MINA|84864|MYC induced nuclear antigen##NM_032778|MINA|84864|MYC induced nuclear antigen##AK027299|MINA|84864|MYC induced nuclear antigen##DQ453796|MINA|84864|MYC induced nuclear antigen##AB083192|MINA|84864|MYC induced nuclear antigen##NM_153182|MINA|84864|MYC induced nuclear antigen##CR749263|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3##NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3	0.990897	CTCF.p2:-24:0.991
chr2	158184169	158184303	reg1004047.p1	13.241	+	NM_001009959 AK296477	-80	-	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	-1952	-	BC142676 BC142703 AY277591 NM_014568 AK292154 BC144211	-69943	+	L06633 AB528875 CU690346 AF068836 BC036449 TSC_hg19_v1_chr2_-_158300602 AK312753 NM_004288	116328	-	TSC_hg19_v1_chr2_-_158454049 AF525679 NM_001111031	269839	-	AB590288 CU692676 DQ895570 EU176205 AF525680 AF525681 AY127050 TSC_hg19_v1_chr2_-_158485239	300962	-	NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##L06633|CYTIP|9595|cytohesin 1 interacting protein##AF068836|CYTIP|9595|cytohesin 1 interacting protein##BC036449|CYTIP|9595|cytohesin 1 interacting protein##AK312753|CYTIP|9595|cytohesin 1 interacting protein##NM_004288|CYTIP|9595|cytohesin 1 interacting protein##AF525679|ACVR1C|130399|activin A receptor, type IC##NM_001111031|ACVR1C|130399|activin A receptor, type IC##DQ895570|ACVR1C|130399|activin A receptor, type IC##EU176205|ACVR1C|130399|activin A receptor, type IC##AF525680|ACVR1C|130399|activin A receptor, type IC##AF525681|ACVR1C|130399|activin A receptor, type IC##AY127050|ACVR1C|130399|activin A receptor, type IC	0.998723	CTCF.p2:-3:0.999
chr4	103546858	103546959	reg1003954.p1	13.241	+	TSC_hg19_v1_chr4_+_103422822 AK291450	-124085	+	TSC_hg19_v1_chr4_+_103422737 M55643	-124146	+	TSC_hg19_v1_chr4_+_103422554 M58603	-124353	+	EU009130 TSC_hg19_v1_chr4_-_103682110 AK300015 AB209846 AK312827	135178	-	TSC_hg19_v1_chr4_-_103682126 U60337 AK291598 BC015743	135227	-	NM_005908 TSC_hg19_v1_chr4_-_103682152	135256	-	AK291450|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##M55643|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##M58603|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##EU009130|MANBA|4126|mannosidase, beta A, lysosomal##AK300015|MANBA|4126|mannosidase, beta A, lysosomal##AB209846|MANBA|4126|mannosidase, beta A, lysosomal##AK312827|MANBA|4126|mannosidase, beta A, lysosomal##U60337|MANBA|4126|mannosidase, beta A, lysosomal##AK291598|MANBA|4126|mannosidase, beta A, lysosomal##BC015743|MANBA|4126|mannosidase, beta A, lysosomal##NM_005908|MANBA|4126|mannosidase, beta A, lysosomal	0.010021	
chr5	159866259	159866394	reg1005510.p2	13.241	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-17423	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-17472	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-20221	-	AK025130 TSC_hg19_v1_chr5_-_160112393	246013	-	AB018258 AK295081 AK090832 AX746642 NM_025153	412805	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	1108800	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.999667	CTCF.p2:-8:1.000
chr19	3163399	3163514	reg1004224.p1	13.240	+	TSC_hg19_v1_chr19_+_3136030 GU727645 NM_002068 M63904 AK300481 AK291329 BC013585 GU727637	-27312	+	TSC_hg19_v1_chr19_+_3122573 BC051315 CU674752	-40851	+	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	-41063	+	NM_003775 TSC_hg19_v1_chr19_+_3178766 BC014970 AJ000479	15296	+	TSC_hg19_v1_chr19_+_3185896 NM_020170	22422	+	AK172848 TSC_hg19_v1_chr19_+_3185938 AK314044 BC010064 BC019091 BC025926	22488	+	GU727645|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_002068|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##M63904|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK300481|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK291329|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC013585|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##GU727637|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##NM_003775|S1PR4|8698|sphingosine-1-phosphate receptor 4##BC014970|S1PR4|8698|sphingosine-1-phosphate receptor 4##AJ000479|S1PR4|8698|sphingosine-1-phosphate receptor 4##NM_020170|NCLN|56926|nicalin##AK172848|NCLN|56926|nicalin##AK314044|NCLN|56926|nicalin##BC010064|NCLN|56926|nicalin##BC019091|NCLN|56926|nicalin##BC025926|NCLN|56926|nicalin	0.764119	CTCF.p2:4:0.751
chr19	58666535	58666648	reg1007014.p1	13.240	+	BC047501 NM_024620 AK095349 AK096542	-4443	-	AK096238 AK294376 NM_001145542	-36814	-	TSC_hg19_v1_chr19_-_58609613 AK022957 AY280799 NM_001145543 NM_001145544 NM_023926	-56924	-	TSC_hg19_v1_chr19_+_58694439 AB029149 NM_016324 NM_016325 NM_133502 AK222855 AK222878 AK316429	27821	+	TSC_hg19_v1_chr19_+_58694465 AB029150 AK295036	27880	+	AF275680 TSC_hg19_v1_chr19_+_58694787 AK022328 AK297466 AK296929	28141	+	BC047501|ZNF329|79673|zinc finger protein 329##NM_024620|ZNF329|79673|zinc finger protein 329##AK095349|ZNF329|79673|zinc finger protein 329##AK096542|ZNF329|79673|zinc finger protein 329##AK096238|ZSCAN18|65982|zinc finger and SCAN domain containing 18##AK294376|ZSCAN18|65982|zinc finger and SCAN domain containing 18##NM_001145542|ZSCAN18|65982|zinc finger and SCAN domain containing 18##AK022957|ZSCAN18|65982|zinc finger and SCAN domain containing 18##AY280799|ZSCAN18|65982|zinc finger and SCAN domain containing 18##NM_001145543|ZSCAN18|65982|zinc finger and SCAN domain containing 18##NM_001145544|ZSCAN18|65982|zinc finger and SCAN domain containing 18##NM_023926|ZSCAN18|65982|zinc finger and SCAN domain containing 18##AB029149|ZNF274|10782|zinc finger protein 274##NM_016324|ZNF274|10782|zinc finger protein 274##NM_016325|ZNF274|10782|zinc finger protein 274##NM_133502|ZNF274|10782|zinc finger protein 274##AK222855|ZNF274|10782|zinc finger protein 274##AK222878|ZNF274|10782|zinc finger protein 274##AK316429|ZNF274|10782|zinc finger protein 274##AB029150|ZNF274|10782|zinc finger protein 274##AK295036|ZNF274|10782|zinc finger protein 274##AF275680|ZNF274|10782|zinc finger protein 274##AK022328|ZNF274|10782|zinc finger protein 274##AK297466|ZNF274|10782|zinc finger protein 274##AK296929|ZNF274|10782|zinc finger protein 274	0.98882	CTCF.p2:16:0.989
chr17	34074600	34074723	reg1006281.p1	13.239	+	AK122652 NM_033315 TSC_hg19_v1_chr17_+_34058691 BC041133	-15944	+	TSC_hg19_v1_chr17_+_33914357 BC006201 CR749392 AK292531	-160197	+	TSC_hg19_v1_chr17_+_33914353 AK301522 AY341427 AK289528	-160324	+	AF508784 AF508785 NM_139285	5235	-	NM_145272 BC021727 AB528807 AY557347	13276	+	AF219624 BC011774 AY358987 TSC_hg19_v1_chr17_-_34122596 BC002631 AF330002 NM_001032278 NM_024302 AK122604	47967	-	AK122652|RASL10B|91608|RAS-like, family 10, member B##NM_033315|RASL10B|91608|RAS-like, family 10, member B##BC041133|RASL10B|91608|RAS-like, family 10, member B##BC006201|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##CR749392|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AK292531|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AK301522|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AY341427|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AK289528|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AF508784|GAS2L2|246176|growth arrest-specific 2 like 2##AF508785|GAS2L2|246176|growth arrest-specific 2 like 2##NM_139285|GAS2L2|246176|growth arrest-specific 2 like 2##NM_145272|C17orf50|146853|chromosome 17 open reading frame 50##BC021727|C17orf50|146853|chromosome 17 open reading frame 50##AY557347|C17orf50|146853|chromosome 17 open reading frame 50##AF219624|MMP28|79148|matrix metallopeptidase 28##BC011774|MMP28|79148|matrix metallopeptidase 28##AY358987|MMP28|79148|matrix metallopeptidase 28##BC002631|MMP28|79148|matrix metallopeptidase 28##AF330002|MMP28|79148|matrix metallopeptidase 28##NM_001032278|MMP28|79148|matrix metallopeptidase 28##NM_024302|MMP28|79148|matrix metallopeptidase 28##AK122604|MMP28|79148|matrix metallopeptidase 28	0.991026	CTCF.p2:17:0.991
chr4	3108437	3108569	reg1004101.p1	13.238	+	L12392 TSC_hg19_v1_chr4_+_3076416 AB016794 NM_002111	-32176	+	TSC_hg19_v1_chr4_+_2965297 AK292390 AK223581 NM_001004056 NM_001004057 NM_182982 BC110825 BC027597 BC039732 BC117320 U33054 U33055 U33056 AK293569 X97879 X97880 X97881 X98118 HQ258463 X75897	-142968	+	TSC_hg19_v1_chr4_-_2965155 AK292939	-143309	-	AK126094 NM_001042690	142263	+	TSC_hg19_v1_chr4_+_3294763 AK310999 BC028154	186257	+	AF030111 NM_002926 NM_198229	207370	+	L12392|HTT|3064|huntingtin##AB016794|HTT|3064|huntingtin##NM_002111|HTT|3064|huntingtin##AK292390|GRK4|2868|G protein-coupled receptor kinase 4##AK223581|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004056|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004057|GRK4|2868|G protein-coupled receptor kinase 4##NM_182982|GRK4|2868|G protein-coupled receptor kinase 4##BC027597|GRK4|2868|G protein-coupled receptor kinase 4##BC117320|GRK4|2868|G protein-coupled receptor kinase 4##U33054|GRK4|2868|G protein-coupled receptor kinase 4##U33055|GRK4|2868|G protein-coupled receptor kinase 4##U33056|GRK4|2868|G protein-coupled receptor kinase 4##X97879|GRK4|2868|G protein-coupled receptor kinase 4##X97880|GRK4|2868|G protein-coupled receptor kinase 4##X97881|GRK4|2868|G protein-coupled receptor kinase 4##X98118|GRK4|2868|G protein-coupled receptor kinase 4##HQ258463|GRK4|2868|G protein-coupled receptor kinase 4##X75897|GRK4|2868|G protein-coupled receptor kinase 4##AK292939|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##AK126094|C4orf44|345222|chromosome 4 open reading frame 44##NM_001042690|C4orf44|345222|chromosome 4 open reading frame 44##AK310999|RGS12|6002|regulator of G-protein signaling 12##BC028154|RGS12|6002|regulator of G-protein signaling 12##AF030111|RGS12|6002|regulator of G-protein signaling 12##NM_002926|RGS12|6002|regulator of G-protein signaling 12##NM_198229|RGS12|6002|regulator of G-protein signaling 12	0.997883	CTCF.p2:7:0.998
chr3	98531750	98531888	reg1006014.p1	13.236	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-80232	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-80574	+	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	-219400	-	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	88673	-	AK311449 NM_001850 NM_020351 AF170702 BC013581	825631	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	1004926	+	AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26	0.979799	CTCF.p2:15:0.980
chr4	75397707	75397851	reg1006499.p1	13.236	+	BC009799 M30704 NM_001657	-86927	+	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	-166839	+	AK289455 BC127938 BC127939 DQ235269 AY358920 NM_001013442 DQ235264 DQ235265 DQ235266 DQ235267 DQ235268	-223560	+	BC009799 M30704 NM_001657	82849	+	BC011618 S55606 AB109441 NM_001729	322004	-	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	460593	+	BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin##AK289455|EPGN|255324|epithelial mitogen homolog (mouse)##BC127938|EPGN|255324|epithelial mitogen homolog (mouse)##BC127939|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235269|EPGN|255324|epithelial mitogen homolog (mouse)##AY358920|EPGN|255324|epithelial mitogen homolog (mouse)##NM_001013442|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235264|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235265|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235266|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235267|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235268|EPGN|255324|epithelial mitogen homolog (mouse)##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1	0.576399	CTCF.p2:3:0.576
chr7	1472216	1472322	reg1003498.p1	13.236	+	TSC_hg19_v1_chr7_+_1272552 NM_001080461	-199667	+	TSC_hg19_v1_chr7_+_1200097 AK090593	-272156	+	TSC_hg19_v1_chr7_-_1199853 NM_182491	-272430	-	CU691530 EU832111 EU832205 AK074068 BC037988 TSC_hg19_v1_chr7_-_1499102	26764	-	TSC_hg19_v1_chr7_-_1499107 AK027124 NM_182924	26838	-	TSC_hg19_v1_chr7_-_1544019 AK093809 AX748318 NM_001080453	71764	-	NM_001080461|UNCX|340260|UNC homeobox##NM_182491|ZFAND2A|90637|zinc finger, AN1-type domain 2A##EU832111|MICALL2|79778|MICAL-like 2##EU832205|MICALL2|79778|MICAL-like 2##AK074068|MICALL2|79778|MICAL-like 2##BC037988|MICALL2|79778|MICAL-like 2##AK027124|MICALL2|79778|MICAL-like 2##NM_182924|MICALL2|79778|MICAL-like 2##NM_001080453|INTS1|26173|integrator complex subunit 1	1.008784	CTCF.p2:17:0.997
chr20	48737505	48737622	reg1004463.p1	13.235	+	TSC_hg19_v1_chr20_-_48732483 AK314754 NM_022442 BC005215 NM_021988 NM_199144	-5075	-	BT007382 CU674232 HQ448675 TSC_hg19_v1_chr20_-_48729684 BC000468 BX647511 BX648147 NM_001032288	-7873	-	TSC_hg19_v1_chr20_+_48599515 NM_005985 AK313228 BC012910 AF125377 DQ891599 DQ894793 AB464226 AF131208 CU680444	-138010	+	TSC_hg19_v1_chr20_-_48770209 BC140089 BC143091 AB587452	32627	-	TSC_hg19_v1_chr20_-_48770251 AB044550 BC018893 BC142966	32676	-	TSC_hg19_v1_chr20_-_48770261 AK023028 AF155120	32713	-	AK314754|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_022442|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BC005215|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_021988|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_199144|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BT007382|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##HQ448675|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BC000468|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BX647511|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BX648147|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_001032288|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_005985|SNAI1|6615|snail homolog 1 (Drosophila)##AK313228|SNAI1|6615|snail homolog 1 (Drosophila)##BC012910|SNAI1|6615|snail homolog 1 (Drosophila)##AF125377|SNAI1|6615|snail homolog 1 (Drosophila)##DQ891599|SNAI1|6615|snail homolog 1 (Drosophila)##DQ894793|SNAI1|6615|snail homolog 1 (Drosophila)##AF131208|SNAI1|6615|snail homolog 1 (Drosophila)##BC140089|TMEM189|387521|transmembrane protein 189##BC143091|TMEM189|387521|transmembrane protein 189##AB044550|TMEM189|387521|transmembrane protein 189##BC018893|TMEM189|387521|transmembrane protein 189##BC142966|TMEM189|387521|transmembrane protein 189##AK023028|TMEM189|387521|transmembrane protein 189##AF155120|TMEM189|387521|transmembrane protein 189	0.02226	
chr22	30504760	30504908	reg1006597.p1	13.235	+	BC030013 NM_152510	-28382	+	BC142713 TSC_hg19_v1_chr22_+_30279201 AB002369 BC152455	-225573	+	TSC_hg19_v1_chr22_+_30279167 BC151217 AK289581 NM_021090 NM_153050 NM_153051	-225705	+	AB527710 X13967 BC093733 BC093735 BC143305 BC069540 TSC_hg19_v1_chr22_-_30642749 AK315310 NM_002309	137905	-	CR541703 AB463155 CU013134 CU013422 DQ892537 DQ895748 CR456534 BC011589 NM_020530 TSC_hg19_v1_chr22_-_30662841	157981	-	CU013000 CU013288 CU692418 AB528172 BC021927 AK309436 AK055587 TSC_hg19_v1_chr22_-_30685566 CR456449 AK310246 NM_001037666	180716	-	BC030013|HORMAD2|150280|HORMA domain containing 2##NM_152510|HORMAD2|150280|HORMA domain containing 2##BC142713|MTMR3|8897|myotubularin related protein 3##AB002369|MTMR3|8897|myotubularin related protein 3##BC152455|MTMR3|8897|myotubularin related protein 3##BC151217|MTMR3|8897|myotubularin related protein 3##AK289581|MTMR3|8897|myotubularin related protein 3##NM_021090|MTMR3|8897|myotubularin related protein 3##NM_153050|MTMR3|8897|myotubularin related protein 3##NM_153051|MTMR3|8897|myotubularin related protein 3##X13967|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093733|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093735|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC143305|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC069540|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AK315310|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##NM_002309|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##CR541703|OSM|5008|oncostatin M##CU013134|OSM|5008|oncostatin M##CU013422|OSM|5008|oncostatin M##DQ892537|OSM|5008|oncostatin M##DQ895748|OSM|5008|oncostatin M##CR456534|OSM|5008|oncostatin M##BC011589|OSM|5008|oncostatin M##NM_020530|OSM|5008|oncostatin M##CU013000|GATSL3|652968|GATS protein-like 3##CU013288|GATSL3|652968|GATS protein-like 3##BC021927|GATSL3|652968|GATS protein-like 3##AK309436|GATSL3|652968|GATS protein-like 3##AK055587|GATSL3|652968|GATS protein-like 3##CR456449|GATSL3|652968|GATS protein-like 3##AK310246|GATSL3|652968|GATS protein-like 3##NM_001037666|GATSL3|652968|GATS protein-like 3	0.0	
chr7	40644566	40644670	reg1004449.p1	13.235	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-470009	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-470087	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	-470487	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	1098067	-	NM_000168	1631999	-	TSC_hg19_v1_chr7_-_42276797 AK308429	1632177	-	AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3	0.996581	CTCF.p2:7:0.997
chr15	49714213	49714364	reg1005969.p1	13.234	+	TSC_hg19_v1_chr15_+_49462423 NM_002044 AK301361 BC005141 AK098049 AK316440 M84443 BT006901 CU675015 DQ890583 DQ893742	-251825	+	TSC_hg19_v1_chr15_+_49447990 AF461816 AL832745 NM_001001556	-266297	+	AF120268 L40388 TSC_hg19_v1_chr15_-_49447811 AB462991 CR542063 CU680378 EU446744 EU831466 EU831553 AK222590 AB209799 AF100762 AF212227 AF084260 BC012629 AK312643 AK295598 NM_001143887 NM_004236	-266479	-	NM_002009 BC010956 AK313160 M60828 S81661	1128	+	BC048125 BC048139 AK057362 NM_152647	198795	-	TSC_hg19_v1_chr15_+_49913254 NM_001144955 NM_020234 BC018028 AF168717 AK290184 BC093073 BC032535	198961	+	NM_002044|GALK2|2585|galactokinase 2##AK301361|GALK2|2585|galactokinase 2##BC005141|GALK2|2585|galactokinase 2##AK098049|GALK2|2585|galactokinase 2##AK316440|GALK2|2585|galactokinase 2##M84443|GALK2|2585|galactokinase 2##BT006901|GALK2|2585|galactokinase 2##DQ890583|GALK2|2585|galactokinase 2##DQ893742|GALK2|2585|galactokinase 2##AF461816|GALK2|2585|galactokinase 2##AL832745|GALK2|2585|galactokinase 2##NM_001001556|GALK2|2585|galactokinase 2##AF120268|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##L40388|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##CR542063|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU446744|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831466|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831553|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK222590|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AB209799|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF100762|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF212227|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF084260|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##BC012629|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK312643|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK295598|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_001143887|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_004236|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_002009|FGF7|2252|fibroblast growth factor 7##BC010956|FGF7|2252|fibroblast growth factor 7##AK313160|FGF7|2252|fibroblast growth factor 7##M60828|FGF7|2252|fibroblast growth factor 7##S81661|FGF7|2252|fibroblast growth factor 7##BC048125|C15orf33|196951|chromosome 15 open reading frame 33##BC048139|C15orf33|196951|chromosome 15 open reading frame 33##AK057362|C15orf33|196951|chromosome 15 open reading frame 33##NM_152647|C15orf33|196951|chromosome 15 open reading frame 33##NM_001144955|DTWD1|56986|DTW domain containing 1##NM_020234|DTWD1|56986|DTW domain containing 1##BC018028|DTWD1|56986|DTW domain containing 1##AF168717|DTWD1|56986|DTW domain containing 1##AK290184|DTWD1|56986|DTW domain containing 1##BC093073|DTWD1|56986|DTW domain containing 1##BC032535|DTWD1|56986|DTW domain containing 1	0.871517	CTCF.p2:3:0.872
chr2	73200850	73200974	reg1004684.p1	13.234	+	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	-56259	+	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	-86382	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	-147808	-	TSC_hg19_v1_chr2_-_73298414 AK024193	97524	-	TSC_hg19_v1_chr2_-_73298842 AL833454 AK314770 AK289731 AY044437 BC101311 BC101312 BC101313 NM_144579	97977	-	AK023823 TSC_hg19_v1_chr2_-_73316784	115871	-	BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1##NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##AK024193|SFXN5|94097|sideroflexin 5##AL833454|SFXN5|94097|sideroflexin 5##AK314770|SFXN5|94097|sideroflexin 5##AK289731|SFXN5|94097|sideroflexin 5##AY044437|SFXN5|94097|sideroflexin 5##BC101311|SFXN5|94097|sideroflexin 5##BC101312|SFXN5|94097|sideroflexin 5##BC101313|SFXN5|94097|sideroflexin 5##NM_144579|SFXN5|94097|sideroflexin 5##AK023823|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)	0.512908	CTCF.p2:7:0.513
chr5	75633883	75634008	reg1006096.p1	13.234	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-254674	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-620685	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	-625683	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	65171	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	285200	-	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	378011	+	AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor	0.287445	CTCF.p2:-4:0.287
chr11	102785621	102785767	reg1006100.p1	13.233	+	AB590529 HQ258263 L23808 AK313959 BC112301 BC143773 NM_002426	-39980	-	DQ399598 CU686970 J03209 X05232 BC074815 BC074869 BC105954 BC107490 BC107491 AK313310 AK223283 AK223291 TSC_hg19_v1_chr11_-_102714339 BC069676 BC069716 NM_002422	-71398	-	TSC_hg19_v1_chr11_-_102668892 NM_001145938 NM_002421	-116766	-	AY256443 AY256444 HQ258010 X75308 BC067522 BC067523 BC074807 BC074808 AK315341 X81334 AK222748 AK292211 NM_002427	40753	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	177047	-	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	177229	-	HQ258263|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##L23808|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##AK313959|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##BC112301|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##BC143773|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##NM_002426|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##DQ399598|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##J03209|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##X05232|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074815|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074869|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC105954|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107490|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107491|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK313310|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223283|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223291|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069676|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069716|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##NM_002422|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##NM_001145938|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##NM_002421|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AY256443|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AY256444|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##HQ258010|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##X75308|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC067522|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC067523|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC074807|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC074808|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK315341|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##X81334|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK222748|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK292211|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##NM_002427|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	0.814809	CTCF.p2:-6:0.815
chrX	110487595	110487733	reg1006657.p1	13.233	+	NM_001128168 NM_001128172 NM_001128173 AB102659 AF068864 AM943850 AM943851 AM943852	-121347	+	NM_002578 TSC_hg19_v1_chrX_+_110339395	-148263	+	AK290504 NM_001128166 NM_001128167 TSC_hg19_v1_chrX_+_110187624 AK315284	-300117	+	TSC_hg19_v1_chrX_-_110513712 AF029232 AK312701	26040	-	AJ000388 TSC_hg19_v1_chrX_-_110513775 NM_014289	26099	-	AJ003112 NM_000555	166709	-	NM_001128168|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128172|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128173|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AB102659|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AF068864|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943850|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943851|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943852|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AF029232|CAPN6|827|calpain 6##AK312701|CAPN6|827|calpain 6##AJ000388|CAPN6|827|calpain 6##NM_014289|CAPN6|827|calpain 6##AJ003112|DCX|1641|doublecortin##NM_000555|DCX|1641|doublecortin	0.999048	CTCF.p2:2:0.999
chr10	27945646	27945774	reg1005912.p1	13.231	+	TSC_hg19_v1_chr10_+_27793232 AY574034 AK295443 AK297629 AK299457 BC029350 AF087860 BC015014 NM_021252 AL136734 AK223153 AB464117 AF137372 AF498950 AK001555 AM393142 BT009840 CR533455 CU677165	-152481	+	JF332167 BC107139 AK126025 NM_001034842	-242473	-	TSC_hg19_v1_chr10_-_27531041 AK057469 AF505653 NM_001042473	-414628	-	BC036207 TSC_hg19_v1_chr10_-_28034752 AK125339 NM_001242702 NM_173576	89051	-	AK292521 TSC_hg19_v1_chr10_-_28287879 AK001679 NM_018076 BC085611	342174	-	BC038105 AK057360 NM_173496	625330	-	AY574034|RAB18|22931|RAB18, member RAS oncogene family##AK295443|RAB18|22931|RAB18, member RAS oncogene family##AK297629|RAB18|22931|RAB18, member RAS oncogene family##AK299457|RAB18|22931|RAB18, member RAS oncogene family##BC029350|RAB18|22931|RAB18, member RAS oncogene family##AF087860|RAB18|22931|RAB18, member RAS oncogene family##BC015014|RAB18|22931|RAB18, member RAS oncogene family##NM_021252|RAB18|22931|RAB18, member RAS oncogene family##AL136734|RAB18|22931|RAB18, member RAS oncogene family##AK223153|RAB18|22931|RAB18, member RAS oncogene family##AF137372|RAB18|22931|RAB18, member RAS oncogene family##AF498950|RAB18|22931|RAB18, member RAS oncogene family##AK001555|RAB18|22931|RAB18, member RAS oncogene family##AM393142|RAB18|22931|RAB18, member RAS oncogene family##BT009840|RAB18|22931|RAB18, member RAS oncogene family##CR533455|RAB18|22931|RAB18, member RAS oncogene family##JF332167|PTCHD3|374308|patched domain containing 3##BC107139|PTCHD3|374308|patched domain containing 3##AK126025|PTCHD3|374308|patched domain containing 3##NM_001034842|PTCHD3|374308|patched domain containing 3##AK057469|ACBD5|91452|acyl-CoA binding domain containing 5##AF505653|ACBD5|91452|acyl-CoA binding domain containing 5##NM_001042473|ACBD5|91452|acyl-CoA binding domain containing 5##BC036207|MKX|283078|mohawk homeobox##AK125339|MKX|283078|mohawk homeobox##NM_001242702|MKX|283078|mohawk homeobox##NM_173576|MKX|283078|mohawk homeobox##AK292521|ARMC4|55130|armadillo repeat containing 4##AK001679|ARMC4|55130|armadillo repeat containing 4##NM_018076|ARMC4|55130|armadillo repeat containing 4##BC085611|ARMC4|55130|armadillo repeat containing 4##BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	0.98884	CTCF.p2:14:0.580	CTCF.p2:15:0.409
chr1	202088200	202088333	reg1004679.p2	13.231	+	U66894 TSC_hg19_v1_chr1_+_201979752 AK225446 AF517841	-108482	+	NM_001114309 NM_004433 TSC_hg19_v1_chr1_+_201979714 AK309265 AK312273 U97156 BC003569 U73843 U73844 AF016295	-108558	+	TSC_hg19_v1_chr1_+_201951788 BC012166 AJ242586 DQ896012 EU176398 AJ296161	-136474	+	AK295576 AK313044 TSC_hg19_v1_chr1_+_202092044 BC050334 NM_004767 AK222639 Y16280	3751	+	CU677299 AB118752 TSC_hg19_v1_chr1_-_202113832 BC015408 AK127138 AK313122	25508	-	TSC_hg19_v1_chr1_-_202113866 NM_138795	25594	-	U66894|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK225446|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF517841|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##NM_001114309|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##NM_004433|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK309265|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK312273|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U97156|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##BC003569|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73843|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73844|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF016295|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##BC012166|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AJ242586|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##DQ896012|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##EU176398|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AJ296161|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AK295576|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK313044|GPR37L1|9283|G protein-coupled receptor 37 like 1##BC050334|GPR37L1|9283|G protein-coupled receptor 37 like 1##NM_004767|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK222639|GPR37L1|9283|G protein-coupled receptor 37 like 1##Y16280|GPR37L1|9283|G protein-coupled receptor 37 like 1##AB118752|ARL8A|127829|ADP-ribosylation factor-like 8A##BC015408|ARL8A|127829|ADP-ribosylation factor-like 8A##AK127138|ARL8A|127829|ADP-ribosylation factor-like 8A##AK313122|ARL8A|127829|ADP-ribosylation factor-like 8A##NM_138795|ARL8A|127829|ADP-ribosylation factor-like 8A	1.144616	CTCF.p2:2:0.993
chr2	45721931	45722083	reg1006387.p1	13.231	+	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	-485457	-	AJ012611 NM_005413 AL162671	-552961	+	NM_024766 TSC_hg19_v1_chr2_+_44589085 BC029359 AK027104 BC053733	-1132915	+	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	73121	-	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	116400	-	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	157067	+	BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AJ012611|SIX3|6496|SIX homeobox 3##NM_005413|SIX3|6496|SIX homeobox 3##AL162671|SIX3|6496|SIX homeobox 3##NM_024766|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC029359|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK027104|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC053733|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon	0.992336	CTCF.p2:12:0.992
chr19	41325782	41325903	reg1006461.p1	13.229	+	NM_053046 BC036051 AK098182	-20451	+	TSC_hg19_v1_chr19_+_41305105 AK074408 BC001723	-20719	+	TSC_hg19_v1_chr19_+_41305091 NM_080732 AL832506	-20776	+	X13929 X13897 AF182275 M33318 X13930 BC096253 BC096254 BC096255 BC096256 AK309594 TSC_hg19_v1_chr19_-_41356353 AK307740 AK312964 NM_000762	30432	-	NM_000764 NM_030589	62814	-	AK307933 AK310944 TSC_hg19_v1_chr19_+_41430151 BC041174 M29873 DQ198366 DQ198367	104308	+	NM_053046|EGLN2|112398|egl nine homolog 2 (C. elegans)##BC036051|EGLN2|112398|egl nine homolog 2 (C. elegans)##AK098182|EGLN2|112398|egl nine homolog 2 (C. elegans)##AK074408|EGLN2|112398|egl nine homolog 2 (C. elegans)##BC001723|EGLN2|112398|egl nine homolog 2 (C. elegans)##NM_080732|EGLN2|112398|egl nine homolog 2 (C. elegans)##AL832506|EGLN2|112398|egl nine homolog 2 (C. elegans)##X13929|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##X13897|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AF182275|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##M33318|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096253|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096254|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096255|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096256|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK309594|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK307740|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK312964|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##NM_000762|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##NM_000764|CYP2A7|1549|cytochrome P450, family 2, subfamily A, polypeptide 7##NM_030589|CYP2A7|1549|cytochrome P450, family 2, subfamily A, polypeptide 7##AK307933|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##AK310944|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##BC041174|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##M29873|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##DQ198366|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##DQ198367|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	0.731139	CTCF.p2:5:0.731
chr2	33808421	33808560	reg1005773.p1	13.229	+	AB020653 NM_015376	-69549	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-106794	+	NM_001139488	-107170	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	15855	-	TSC_hg19_v1_chr2_+_36582920 AY358371	2774472	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	2774912	+	AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_001139488|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	0.095762	
chr6	2196434	2196558	reg1005627.p1	13.229	+	AF040260 NM_001253846	-20272	-	TSC_hg19_v1_chr6_+_1611545 BC169307	-584922	+	BC134421 NM_001453	-585816	+	CR541929 CR541947 DQ892789 DQ896036 AF042377 TSC_hg19_v1_chr6_-_2245809 AK130651 AK313953 BC000117 NM_001500	49302	-	TSC_hg19_v1_chr6_+_2245995 AK023629	49517	+	NM_152554	438801	-	AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase##BC169307|FOXC1|2296|forkhead box C1##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##CR541929|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541947|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ892789|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ896036|GMDS|2762|GDP-mannose 4,6-dehydratase##AF042377|GMDS|2762|GDP-mannose 4,6-dehydratase##AK130651|GMDS|2762|GDP-mannose 4,6-dehydratase##AK313953|GMDS|2762|GDP-mannose 4,6-dehydratase##BC000117|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001500|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_152554|C6orf195|154386|chromosome 6 open reading frame 195	0.817844	CTCF.p2:1:0.818
chr7	4869853	4869992	reg1004605.p1	13.229	+	TSC_hg19_v1_chr7_+_4815296 AB007875	-54636	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	-54661	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	-147671	+	DQ891226 DQ894411 AF218840 BC036653 NM_020144 TSC_hg19_v1_chr7_-_4901662 AK312788	31627	-	TSC_hg19_v1_chr7_-_4923339 AK302549 AB058752 AK294745 NM_018059	53370	-	AY424288 BC037881 BC048346 TSC_hg19_v1_chr7_-_4998841 AK094524 BC067905 NM_001100600 NM_198403	128877	-	AB007875|KIAA0415|9907|KIAA0415##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##DQ891226|PAPOLB|56903|poly(A) polymerase beta (testis specific)##DQ894411|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AF218840|PAPOLB|56903|poly(A) polymerase beta (testis specific)##BC036653|PAPOLB|56903|poly(A) polymerase beta (testis specific)##NM_020144|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AK312788|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AK302549|RADIL|55698|Ras association and DIL domains##AB058752|RADIL|55698|Ras association and DIL domains##AK294745|RADIL|55698|Ras association and DIL domains##NM_018059|RADIL|55698|Ras association and DIL domains##AY424288|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC037881|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC048346|MMD2|221938|monocyte to macrophage differentiation-associated 2##AK094524|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC067905|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_001100600|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_198403|MMD2|221938|monocyte to macrophage differentiation-associated 2	0.81223	CTCF.p2:18:0.263	CTCF.p2:-37:0.332	CTCF.p2:-38:0.217
chr5	176538951	176539095	reg1005499.p1	13.228	+	NM_022963 X57205 AF202063 EU826602 AF359241 AB590389 DQ893458 DQ896348 EU826603 JN007471 JN007472 JN007473 JN007474 JN007475 JN007476 JN007477 JN007478 JN007479 JN007480 JN007481 JN007482	-22447	+	TSC_hg19_v1_chr5_+_176513910 BC011847 AK301169 AK225280 AK225909 NM_002011 NM_213647 L03840	-25141	+	AK297448 AK297584 NM_012279 TSC_hg19_v1_chr5_+_176449708 AK295549 AF083340 AK026627 AK300065 BC007775 AL359576 CR749692 AK131469 AK300738 AB463365 AM392799 AM393768	-89304	+	TSC_hg19_v1_chr5_+_176560037 AK126591	21007	+	TSC_hg19_v1_chr5_+_176560056 NM_172349	21044	+	TSC_hg19_v1_chr5_+_176560773 BC021961 NM_022455	21719	+	NM_022963|FGFR4|2264|fibroblast growth factor receptor 4##X57205|FGFR4|2264|fibroblast growth factor receptor 4##AF202063|FGFR4|2264|fibroblast growth factor receptor 4##EU826602|FGFR4|2264|fibroblast growth factor receptor 4##AF359241|FGFR4|2264|fibroblast growth factor receptor 4##DQ893458|FGFR4|2264|fibroblast growth factor receptor 4##DQ896348|FGFR4|2264|fibroblast growth factor receptor 4##EU826603|FGFR4|2264|fibroblast growth factor receptor 4##BC011847|FGFR4|2264|fibroblast growth factor receptor 4##AK301169|FGFR4|2264|fibroblast growth factor receptor 4##AK225280|FGFR4|2264|fibroblast growth factor receptor 4##AK225909|FGFR4|2264|fibroblast growth factor receptor 4##NM_002011|FGFR4|2264|fibroblast growth factor receptor 4##NM_213647|FGFR4|2264|fibroblast growth factor receptor 4##L03840|FGFR4|2264|fibroblast growth factor receptor 4##AK297448|ZNF346|23567|zinc finger protein 346##NM_012279|ZNF346|23567|zinc finger protein 346##AK295549|ZNF346|23567|zinc finger protein 346##AF083340|ZNF346|23567|zinc finger protein 346##AK026627|ZNF346|23567|zinc finger protein 346##AK300065|ZNF346|23567|zinc finger protein 346##BC007775|ZNF346|23567|zinc finger protein 346##AL359576|ZNF346|23567|zinc finger protein 346##CR749692|ZNF346|23567|zinc finger protein 346##AK131469|ZNF346|23567|zinc finger protein 346##AK300738|ZNF346|23567|zinc finger protein 346##AM392799|ZNF346|23567|zinc finger protein 346##AM393768|ZNF346|23567|zinc finger protein 346##AK126591|NSD1|64324|nuclear receptor binding SET domain protein 1##NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1##BC021961|NSD1|64324|nuclear receptor binding SET domain protein 1##NM_022455|NSD1|64324|nuclear receptor binding SET domain protein 1	0.998588	CTCF.p2:17:0.999
chr10	104661315	104661421	reg1004522.p1	13.227	+	NM_020682 AK057833 AK225972 AF226730 AK309737 BC119637 BC119638	-32111	+	NM_001136200 NM_144591 AL832477 TSC_hg19_v1_chr10_+_104614015 AK098071 BC015994 BC040069 AK311742	-47367	+	AK308466 BT020000 CU687686 BC062997 BC063388 BC032843 M14564 TSC_hg19_v1_chr10_-_104597171 AK289898 AK094106 AK312235 NM_000102	-64184	-	TSC_hg19_v1_chr10_+_104678078 BC021222 AK023479 NM_017649 NM_199076 NM_199077	16689	+	BX648078 TSC_hg19_v1_chr10_-_104953030 BC001595 AK127670 AK291667 AK312517 D38524 NM_001134373 NM_012229	291679	-	BC157875 BC171885 NM_001143909 BC137242 BC137243 BC157829 BC171806	344305	+	NM_020682|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK057833|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK225972|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AF226730|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK309737|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119637|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119638|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32##NM_144591|C10orf32|119032|chromosome 10 open reading frame 32##AL832477|C10orf32|119032|chromosome 10 open reading frame 32##AK098071|C10orf32|119032|chromosome 10 open reading frame 32##BC015994|C10orf32|119032|chromosome 10 open reading frame 32##BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT readthrough##AK311742|C10orf32|119032|chromosome 10 open reading frame 32##AK308466|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BT020000|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC062997|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC063388|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC032843|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##M14564|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK289898|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK094106|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK312235|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##NM_000102|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC021222|CNNM2|54805|cyclin M2##AK023479|CNNM2|54805|cyclin M2##NM_017649|CNNM2|54805|cyclin M2##NM_199076|CNNM2|54805|cyclin M2##NM_199077|CNNM2|54805|cyclin M2##BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II##BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II##AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II##AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II##AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II##D38524|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II##BC157875|LOC729020|729020|rcRPE##BC171885|LOC729020|729020|rcRPE##NM_001143909|LOC729020|729020|rcRPE##BC137242|LOC729020|729020|rcRPE##BC137243|LOC729020|729020|rcRPE##BC157829|LOC729020|729020|rcRPE##BC171806|LOC729020|729020|rcRPE	0.859536	CTCF.p2:-16:0.860
chr12	58837475	58837590	reg1005409.p1	13.227	+	BC012776 NM_033276 BC115381 BC115382 TSC_hg19_v1_chr12_+_58335454	-502072	+	TSC_hg19_v1_chr12_+_58335326 BC033881 AF078164	-502196	+	NM_005730	-596786	-	AK301162 AY358295 NM_001136051	475783	-	AY505340 BC126169 BC126171 BC143960 AY358288 NM_153377 TSC_hg19_v1_chr12_-_59314272	476645	-	AK292857 TSC_hg19_v1_chr12_-_59314301	476770	-	BC012776|XRCC6BP1|91419|XRCC6 binding protein 1##NM_033276|XRCC6BP1|91419|XRCC6 binding protein 1##BC115381|XRCC6BP1|91419|XRCC6 binding protein 1##BC115382|XRCC6BP1|91419|XRCC6 binding protein 1##BC033881|XRCC6BP1|91419|XRCC6 binding protein 1##AF078164|XRCC6BP1|91419|XRCC6 binding protein 1##NM_005730|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	0.48827	CTCF.p2:4:0.488
chr1	33342354	33342470	reg1004900.p1	13.227	+	BC062297 NM_001171941	-4331	-	BX537781 AK092102 AX747354 NM_001171940 NM_153756 TSC_hg19_v1_chr1_-_33336539	-5992	-	NM_003680 AK125213	-58720	-	TSC_hg19_v1_chr1_+_33352097 DQ426877 AK313907 BC001777 NM_002143	9672	+	AY359883 TSC_hg19_v1_chr1_-_33366959 AY027543 BC020497 BC001418 BC013953 NM_033504 BC023260	24522	-	NM_001127361 NM_153341 TSC_hg19_v1_chr1_-_33430415 AK131439	87984	-	BC062297|FNDC5|252995|fibronectin type III domain containing 5##NM_001171941|FNDC5|252995|fibronectin type III domain containing 5##BX537781|FNDC5|252995|fibronectin type III domain containing 5##AK092102|FNDC5|252995|fibronectin type III domain containing 5##NM_001171940|FNDC5|252995|fibronectin type III domain containing 5##NM_153756|FNDC5|252995|fibronectin type III domain containing 5##NM_003680|YARS|8565|tyrosyl-tRNA synthetase##AK125213|YARS|8565|tyrosyl-tRNA synthetase##DQ426877|HPCA|3208|hippocalcin##AK313907|HPCA|3208|hippocalcin##BC001777|HPCA|3208|hippocalcin##NM_002143|HPCA|3208|hippocalcin##AY359883|TMEM54|113452|transmembrane protein 54##AY027543|TMEM54|113452|transmembrane protein 54##BC020497|TMEM54|113452|transmembrane protein 54##BC001418|TMEM54|113452|transmembrane protein 54##BC013953|TMEM54|113452|transmembrane protein 54##NM_033504|TMEM54|113452|transmembrane protein 54##BC023260|TMEM54|113452|transmembrane protein 54##NM_001127361|RNF19B|127544|ring finger protein 19B##NM_153341|RNF19B|127544|ring finger protein 19B##AK131439|RNF19B|127544|ring finger protein 19B	0.999707	CTCF.p2:13:1.000
chr16	49626944	49627058	reg1004624.p2	13.227	+	BC021181 BC021718 NM_144602 CU676858	-219173	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-311267	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	-311501	-	NM_015069	233916	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	432139	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	472892	+	BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##NM_015069|ZNF423|23090|zinc finger protein 423##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3	0.260128	CTCF.p2:0:0.260
chr19	18977422	18977564	reg1006358.p1	13.226	+	TSC_hg19_v1_chr19_+_18942822 U65533 AF074016 D86988 U59323	-34680	+	TSC_hg19_v1_chr19_+_18942742 NM_002911 BC039817	-34748	+	AB086984 BC033676 BC110847 L32137 BC125092 TSC_hg19_v1_chr19_-_18902115 AK074508 AK223216 AK290595 AK296586 AK297798 AK297814 NM_000095	-75396	-	BC032615 TSC_hg19_v1_chr19_-_19006935 M62302 BC022450 NM_001492 NM_021267 NM_198207	29458	-	TSC_hg19_v1_chr19_-_19007395 BC084582 AK293463	29972	-	AB528108 AM393761 CR456886 DQ893417 DQ896735 TSC_hg19_v1_chr19_-_19030164 BC017285 BC003155 AJ249366 AL136928 BC007250	52672	-	U65533|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##AF074016|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##D86988|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##U59323|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##NM_002911|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##BC039817|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##AB086984|COMP|1311|cartilage oligomeric matrix protein##BC033676|COMP|1311|cartilage oligomeric matrix protein##BC110847|COMP|1311|cartilage oligomeric matrix protein##L32137|COMP|1311|cartilage oligomeric matrix protein##BC125092|COMP|1311|cartilage oligomeric matrix protein##AK074508|COMP|1311|cartilage oligomeric matrix protein##AK223216|COMP|1311|cartilage oligomeric matrix protein##AK290595|COMP|1311|cartilage oligomeric matrix protein##AK296586|COMP|1311|cartilage oligomeric matrix protein##AK297798|COMP|1311|cartilage oligomeric matrix protein##AK297814|COMP|1311|cartilage oligomeric matrix protein##NM_000095|COMP|1311|cartilage oligomeric matrix protein##BC032615|CERS1|10715|ceramide synthase 1##M62302|GDF1|2657|growth differentiation factor 1##NM_001492|GDF1|2657|growth differentiation factor 1##NM_021267|CERS1|10715|ceramide synthase 1##NM_198207|CERS1|10715|ceramide synthase 1##BC084582|CERS1|10715|ceramide synthase 1##AM393761|COPE|11316|coatomer protein complex, subunit epsilon##CR456886|COPE|11316|coatomer protein complex, subunit epsilon##DQ893417|COPE|11316|coatomer protein complex, subunit epsilon##DQ896735|COPE|11316|coatomer protein complex, subunit epsilon##BC017285|COPE|11316|coatomer protein complex, subunit epsilon##BC003155|COPE|11316|coatomer protein complex, subunit epsilon##AJ249366|COPE|11316|coatomer protein complex, subunit epsilon##AL136928|COPE|11316|coatomer protein complex, subunit epsilon##BC007250|COPE|11316|coatomer protein complex, subunit epsilon	1.405812	CTCF.p2:9:0.999	CTCF.p2:78:0.393
chr15	89901938	89902075	reg1003170.p1	13.225	+	TSC_hg19_v1_chr15_-_89878042 AK291281	-23963	-	BC050559 BC042571 NM_001126131 NM_002693 X98093 TSC_hg19_v1_chr15_-_89878036	-23985	-	TSC_hg19_v1_chr15_+_89787255 AK055176 BC140769 BC144483 BC004277	-114756	+	CU689056 AY257182 AF193809 NM_016321 BC015461 AK298252 AK298641 AF081497 AK301640 AK313238 BC030965 AK290899 AK310222	137789	-	TSC_hg19_v1_chr15_+_90118742 GQ227787 NM_152259	216772	+	TSC_hg19_v1_chr15_-_90198681 BC042063 NM_198525	296614	-	AK291281|POLG|5428|polymerase (DNA directed), gamma##BC050559|POLG|5428|polymerase (DNA directed), gamma##BC042571|POLG|5428|polymerase (DNA directed), gamma##NM_001126131|POLG|5428|polymerase (DNA directed), gamma##NM_002693|POLG|5428|polymerase (DNA directed), gamma##X98093|POLG|5428|polymerase (DNA directed), gamma##AK055176|FANCI|55215|Fanconi anemia, complementation group I##BC140769|FANCI|55215|Fanconi anemia, complementation group I##BC144483|FANCI|55215|Fanconi anemia, complementation group I##BC004277|FANCI|55215|Fanconi anemia, complementation group I##AY257182|RHCG|51458|Rh family, C glycoprotein##AF193809|RHCG|51458|Rh family, C glycoprotein##NM_016321|RHCG|51458|Rh family, C glycoprotein##BC015461|RHCG|51458|Rh family, C glycoprotein##AK298252|RHCG|51458|Rh family, C glycoprotein##AK298641|RHCG|51458|Rh family, C glycoprotein##AF081497|RHCG|51458|Rh family, C glycoprotein##AK301640|RHCG|51458|Rh family, C glycoprotein##AK313238|RHCG|51458|Rh family, C glycoprotein##BC030965|RHCG|51458|Rh family, C glycoprotein##AK290899|RHCG|51458|Rh family, C glycoprotein##AK310222|RHCG|51458|Rh family, C glycoprotein##GQ227787|C15orf42|90381|chromosome 15 open reading frame 42##NM_152259|C15orf42|90381|chromosome 15 open reading frame 42##BC042063|KIF7|374654|kinesin family member 7##NM_198525|KIF7|374654|kinesin family member 7	0.999214	CTCF.p2:-4:0.999
chr13	110768478	110768612	reg1006297.p1	13.224	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	-329637	-	AB290159 AK127806 NM_001198950	-1486976	+	AB020672 BC146791 NM_015011 AL834447	-1520031	+	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	34190	-	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	190964	-	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	191076	+	NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2	0.994186	CTCF.p2:13:0.994
chr21	32458882	32459021	reg1006290.p1	13.224	+	AB096964 NM_001099219	-48157	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	-205093	-	AJ457063 AB096962 NM_181606	-256963	-	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	472407	-	TSC_hg19_v1_chr21_+_33032005 NM_000454 AK312116 BC001034 X02317 EF151142 AB464254 AY049787 AY450286 BT006676 CR450355 CR541742 CU674512 EF143990	573056	+	AB032998 AK025748 AL117417 TSC_hg19_v1_chr21_-_33074136	615167	-	AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##NM_000454|SOD1|6647|superoxide dismutase 1, soluble##AK312116|SOD1|6647|superoxide dismutase 1, soluble##BC001034|SOD1|6647|superoxide dismutase 1, soluble##X02317|SOD1|6647|superoxide dismutase 1, soluble##EF151142|SOD1|6647|superoxide dismutase 1, soluble##AY049787|SOD1|6647|superoxide dismutase 1, soluble##AY450286|SOD1|6647|superoxide dismutase 1, soluble##BT006676|SOD1|6647|superoxide dismutase 1, soluble##CR450355|SOD1|6647|superoxide dismutase 1, soluble##CR541742|SOD1|6647|superoxide dismutase 1, soluble##EF143990|SOD1|6647|superoxide dismutase 1, soluble##AB032998|SCAF4|57466|SR-related CTD-associated factor 4##AK025748|SCAF4|57466|SR-related CTD-associated factor 4##AL117417|SCAF4|57466|SR-related CTD-associated factor 4	0.10686	
chr2	136467578	136467703	reg1003855.p2	13.222	+	TSC_hg19_v1_chr2_+_136289050 BC001217 D21852 BC041093 NM_015361	-178580	+	AK095362 BC089429 NM_032143	-178854	-	NM_001172435 NM_012233 TSC_hg19_v1_chr2_+_135809861 AK022494 BC146809 BC071602 D31886 AB385272 AB449877 BC030992	-657724	+	TSC_hg19_v1_chr2_+_136499328 NM_014607 AK311058	31597	+	TSC_hg19_v1_chr2_+_136499437 BC035594 EF199840 BX647662 AK304096 D87684 BC020806	31757	+	TSC_hg19_v1_chr2_+_136499492 AK292829 AB527369 AM392761 AM393478 CU690126 DQ891123 DQ894302	31853	+	BC001217|R3HDM1|23518|R3H domain containing 1##D21852|R3HDM1|23518|R3H domain containing 1##BC041093|R3HDM1|23518|R3H domain containing 1##NM_015361|R3HDM1|23518|R3H domain containing 1##AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##NM_001172435|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##NM_012233|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AK022494|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC146809|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC071602|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##D31886|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AB449877|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC030992|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##NM_014607|UBXN4|23190|UBX domain protein 4##AK311058|UBXN4|23190|UBX domain protein 4##BC035594|UBXN4|23190|UBX domain protein 4##EF199840|UBXN4|23190|UBX domain protein 4##BX647662|UBXN4|23190|UBX domain protein 4##AK304096|UBXN4|23190|UBX domain protein 4##D87684|UBXN4|23190|UBX domain protein 4##BC020806|UBXN4|23190|UBX domain protein 4##AK292829|UBXN4|23190|UBX domain protein 4##AM392761|UBXN4|23190|UBX domain protein 4##AM393478|UBXN4|23190|UBX domain protein 4##DQ891123|UBXN4|23190|UBX domain protein 4##DQ894302|UBXN4|23190|UBX domain protein 4	0.99641	CTCF.p2:7:0.996
chr1	207085965	207086063	reg1002214.p1	13.221	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	-15214	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	-46839	+	AF453946 NM_013371	-83793	+	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	9273	-	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	33747	-	AK298394 NM_001122979 NM_001170631 NM_032029	57942	-	NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	0.999817	CTCF.p2:19:1.000
chr1	93284036	93284154	reg1005334.p1	13.219	+	AB449875 AB587441 AF008915 AF042345 NM_005665	-26140	-	U67369 NM_005263 TSC_hg19_v1_chr1_-_92952458	-331645	-	BC032751 TSC_hg19_v1_chr1_-_92951630 NM_001127216	-332480	-	TSC_hg19_v1_chr1_+_93297596 NM_000969 AK092963 AK095815 AK314720 AB055762	13469	+	TSC_hg19_v1_chr1_+_93297612 BC109370	13510	+	AF113210 TSC_hg19_v1_chr1_+_93297627 BC132970 BC132972 BC001882 AK222604 U14966 AB208980	13542	+	AB449875|EVI5|7813|ecotropic viral integration site 5##AF008915|EVI5|7813|ecotropic viral integration site 5##NM_005665|EVI5|7813|ecotropic viral integration site 5##U67369|GFI1|2672|growth factor independent 1 transcription repressor##NM_005263|GFI1|2672|growth factor independent 1 transcription repressor##BC032751|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127216|GFI1|2672|growth factor independent 1 transcription repressor##NM_000969|RPL5|6125|ribosomal protein L5##AK092963|RPL5|6125|ribosomal protein L5##AK095815|RPL5|6125|ribosomal protein L5##AK314720|RPL5|6125|ribosomal protein L5##AB055762|RPL5|6125|ribosomal protein L5##BC109370|RPL5|6125|ribosomal protein L5##AF113210|RPL5|6125|ribosomal protein L5##BC132970|RPL5|6125|ribosomal protein L5##BC132972|RPL5|6125|ribosomal protein L5##BC001882|RPL5|6125|ribosomal protein L5##AK222604|RPL5|6125|ribosomal protein L5##U14966|RPL5|6125|ribosomal protein L5##AB208980|RPL5|6125|ribosomal protein L5	0.060803	
chr3	49577217	49577323	reg1003965.p1	13.219	+	AK297802 TSC_hg19_v1_chr3_+_49568448	-8861	+	TSC_hg19_v1_chr3_+_49547870 DQ893491 DQ896435	-29353	+	TSC_hg19_v1_chr3_+_49507721 NM_001165928 NM_001177634 NM_001177635 NM_001177636 NM_001177637 NM_001177638 NM_001177639 NM_001177640 NM_001177641 NM_001177642 NM_001177644 NM_004393 L19711 BC012740 BC014616 AK291692	-69479	+	TSC_hg19_v1_chr3_+_49591913 AF052224 NM_003458	14646	+	BC000362 BC001499 BC001826 NM_001640	134164	+	TSC_hg19_v1_chr3_+_49711791 AK314962	134505	+	AK297802|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##DQ893491|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##DQ896435|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001165928|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177634|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177635|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177636|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177637|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177638|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177639|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177640|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177641|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177642|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177644|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_004393|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##L19711|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##BC012740|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##BC014616|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##AK291692|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##AF052224|BSN|8927|bassoon (presynaptic cytomatrix protein)##NM_003458|BSN|8927|bassoon (presynaptic cytomatrix protein)##BC000362|APEH|327|N-acylaminoacyl-peptide hydrolase##BC001499|APEH|327|N-acylaminoacyl-peptide hydrolase##BC001826|APEH|327|N-acylaminoacyl-peptide hydrolase##NM_001640|APEH|327|N-acylaminoacyl-peptide hydrolase##AK314962|APEH|327|N-acylaminoacyl-peptide hydrolase	1.003355	CTCF.p2:-6:0.952
chr5	110614648	110614784	reg1006227.p1	13.219	+	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	-54767	+	AF385437 NM_139281 BC133025 BC136517 AK095312 TSC_hg19_v1_chr5_+_110428045 AL832494	-186757	+	AY037115 NM_033035	-207327	+	AK054566 NM_139164 TSC_hg19_v1_chr5_-_110848234 AK290312 AK310848 BC019632 AK125317 AK308851 AK315863 AK315869	233486	-	BC042956 TSC_hg19_v1_chr5_-_110848300	233578	-	NM_001142483	477231	-	L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AF385437|WDR36|134430|WD repeat domain 36##NM_139281|WDR36|134430|WD repeat domain 36##BC133025|WDR36|134430|WD repeat domain 36##BC136517|WDR36|134430|WD repeat domain 36##AK095312|WDR36|134430|WD repeat domain 36##AL832494|WDR36|134430|WD repeat domain 36##AY037115|TSLP|85480|thymic stromal lymphopoietin##NM_033035|TSLP|85480|thymic stromal lymphopoietin##AK054566|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_139164|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK290312|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK310848|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC019632|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK125317|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK308851|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315863|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315869|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC042956|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13	0.381639	CTCF.p2:13:0.382
chr16	10831029	10831180	reg1005974.p1	13.218	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-42339	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	-156614	-	NM_024997 BC137079 BC144468	-308364	+	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	6600	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	81444	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	140008	+	HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator	0.96059	CTCF.p2:2:0.961
chr19	16882477	16882614	reg1006220.p1	13.218	+	BX648940 NM_001007525 CR749794	-51757	+	TSC_hg19_v1_chr19_+_16771949 AK025981 NM_024074 AK292764 BC001195	-110579	+	TSC_hg19_v1_chr19_-_16770956 NM_024104	-111583	-	TSC_hg19_v1_chr19_+_16940221 NM_015260 AB014600 AY706204 BC063531 BC110821 AB463259 BC025026	57657	+	TSC_hg19_v1_chr19_+_16999830 AF055917 NM_003950	117280	+	TSC_hg19_v1_chr19_+_16999929 BC074782 AF080214 AY431102	117390	+	BX648940|NWD1|284434|NACHT and WD repeat domain containing 1##NM_001007525|NWD1|284434|NACHT and WD repeat domain containing 1##CR749794|NWD1|284434|NACHT and WD repeat domain containing 1##AK025981|TMEM38A|79041|transmembrane protein 38A##NM_024074|TMEM38A|79041|transmembrane protein 38A##AK292764|TMEM38A|79041|transmembrane protein 38A##BC001195|TMEM38A|79041|transmembrane protein 38A##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42##NM_015260|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##AB014600|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##AY706204|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BC063531|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BC110821|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BC025026|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##AF055917|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##NM_003950|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##BC074782|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AF080214|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AY431102|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3	0.994152	CTCF.p2:-7:0.994
chr10	103832770	103832898	reg1006022.p1	13.216	+	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	-7692	+	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	-16922	-	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	-229227	-	AK300588 TSC_hg19_v1_chr10_-_103874641	41785	-	TSC_hg19_v1_chr10_-_103874760 BC000482 BC009246 NM_003893	41894	-	TSC_hg19_v1_chr10_-_103879963 NM_001113407	47309	-	NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6##BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##AK300588|LDB1|8861|LIM domain binding 1##BC000482|LDB1|8861|LIM domain binding 1##BC009246|LDB1|8861|LIM domain binding 1##NM_003893|LDB1|8861|LIM domain binding 1##NM_001113407|LDB1|8861|LIM domain binding 1	0.940526	CTCF.p2:5:0.941
chr13	31998391	31998519	reg1005628.p1	13.216	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-224245	+	TSC_hg19_v1_chr13_+_31774111 NM_194318	-224352	+	AB003333 TSC_hg19_v1_chr13_-_31736042 BC037553 AB003334 D86956 BC018124 AK314576 AK293955 NM_006644 AK302294 AK303029 AK311464 AK307597	-262352	-	NM_001166058 NM_130806 AF453828 AB527208 AY899851	315258	+	TSC_hg19_v1_chr13_+_32420857 BC021729	422447	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	606986	+	AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB003333|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC037553|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AB003334|HSPH1|10808|heat shock 105kDa/110kDa protein 1##D86956|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC018124|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK314576|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK293955|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_006644|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK302294|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK303029|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK311464|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK307597|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)	0.995577	CTCF.p2:4:0.996
chr15	79888499	79888669	reg1004838.p2	13.216	+	AB028947 NM_015206 BC152466	-163725	+	TSC_hg19_v1_chr15_+_79603557 AJ132270 CR457384	-285017	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	-285081	+	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	300796	-	NM_001199758	301042	-	AL109714 NM_001100879	319013	-	AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##AJ132270|TMED3|23423|transmembrane emp24 protein transport domain containing 3##CR457384|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL109714|ST20|400410|suppressor of tumorigenicity 20##NM_001100879|ST20|400410|suppressor of tumorigenicity 20	0.938834	CTCF.p2:-51:0.875
chr16	12161821	12161964	reg1003523.p1	13.216	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-91319	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-102808	+	NM_001130007	-151374	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	735759	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	735827	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	833576	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.990835	CTCF.p2:19:0.991
chr12	11639633	11639781	reg1005770.p1	13.215	+	BC044827 NM_006248	-91216	-	BC044827 K03205 K03206 BC141917 K03204 NM_005039 NM_199353 NM_199354 AX772842	-131191	-	BC130386 BC035362 K03207 NM_002723 BC128191	-176347	-	TSC_hg19_v1_chr12_+_11802659 AK289441	162966	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	163067	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	163279	+	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2##BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##K03205|PRB1|5542|proline-rich protein BstNI subfamily 1##K03206|PRB1|5542|proline-rich protein BstNI subfamily 1##BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1##K03204|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1##BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4##BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4##K03207|PRB4|5545|proline-rich protein BstNI subfamily 4##NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4##BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4##AK289441|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6	1.29312	CTCF.p2:-18:0.981	CTCF.p2:53:0.312
chr6	158294883	158295017	reg1004722.p1	13.214	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	-50576	+	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	-50661	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-492411	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	107937	+	TSC_hg19_v1_chr6_+_158402923 AF318616	107969	+	TSC_hg19_v1_chr6_+_158402928 AY152396 AB384465	108059	+	AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2##AF318616|SYNJ2|8871|synaptojanin 2##AY152396|SYNJ2|8871|synaptojanin 2	0.99952	CTCF.p2:7:1.000
chr17	77763794	77763919	reg1003896.p2	13.213	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	-11875	+	AY230663 BC041453 NM_178543 AY358622	-58967	+	NM_001082575	-285294	-	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	7051	-	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	49286	-	BC044939 TSC_hg19_v1_chr17_+_77893233	129343	+	NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4	0.935444	CTCF.p2:-15:0.887
chr22	23190679	23190804	reg1004050.p1	13.213	+	X62125 TSC_hg19_v1_chr22_+_23165276 AK129603 BC071804 BC033102 CU689610 L03633 HM996064 HM996172 AF124174 AF194540 AF194541 AF194542 AF194543 AF194544 AF194545 AF194546 AF194547 AF194548 AF194549 AF194550 AF194551 AF194552 AF194553 AF194554 AF194555 AF194556 AF194557 AF194558 AF194559 AF194560 AF194561 AF194562 AF194563 AF194564 AF194565 AF194566 AF194567 AF194568 AF194569 AF194570 AF194571 AF194572 AF194573 AF194574 AF194575 AF194576 AF194577 AJ388658 AJ697911 AM181371 AM183998 AM184000 AM184018 AY685383 AY942038 DQ098709 DQ098711 DQ098766 DQ098772 DQ098775 DQ098778 DQ098782 DQ322816 DQ322984 DQ322992 EF589387 EF589498 EF589544 GU086862 L26532 Y09387 AM184068 DQ098712 DQ098779 AJ399866 AY050712 DQ322899 DQ322900 DQ322979 L21956 S67988 AY950800 U09888 U09892 Y08149 AF103683 AF044486 AY962389 AF092503 AJ408283 DQ098753 Z46858 DQ098738 DQ098739 DQ098762 L38428 DQ098710 AF103704 AF103701 AF103718 AF490954 AF490947 AF103709 AF103640 AF103644 AF103645 AF103647 AF103697 AF103698 AF103700 U87151	-25346	+	TSC_hg19_v1_chr22_+_23154240 L29158 L29159 L29160 L29161 L29164 BC032452 BC089414 AY190827 X57810 L26902	-36466	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	-55635	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	22952	+	TSC_hg19_v1_chr22_+_23222900 AK127411 S77601 X57802 X57803 X57816 X57818 AB369252 AF026919 AF026925 AY190825 L26400 AF490955 AF490961	32188	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	39342	+	BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3##AB369252|CYAT1|100290481|immunoglobulin lambda light chain-like##AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5	0.999639	CTCF.p2:-2:1.000
chr4	26460964	26461075	reg1004242.p1	13.213	+	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	-138337	+	TSC_hg19_v1_chr4_+_26322635 AK302230	-138383	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	-138710	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	30966	-	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	124661	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	401521	+	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2	0.999681	CTCF.p2:-16:1.000
chr8	156988	157169	reg1003175.p2	13.213	+	NM_001005504	-40055	-	None	None	None	None	None	None	AK127000 TSC_hg19_v1_chr8_-_182246 BC064938 BC052779	25194	-	NM_173539 AK093442 AX748129 TSC_hg19_v1_chr8_+_182396 AK313454 NM_001042415 NM_001042416 BC026190	25264	+	AF419858 NM_012173 NM_183420 NM_183421 TSC_hg19_v1_chr8_+_356923	199787	+	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21##AK127000|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC064938|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC052779|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##NM_173539|ZNF596|169270|zinc finger protein 596##AK313454|ZNF596|169270|zinc finger protein 596##NM_001042415|ZNF596|169270|zinc finger protein 596##NM_001042416|ZNF596|169270|zinc finger protein 596##BC026190|ZNF596|169270|zinc finger protein 596##AF419858|FBXO25|26260|F-box protein 25##NM_012173|FBXO25|26260|F-box protein 25##NM_183420|FBXO25|26260|F-box protein 25##NM_183421|FBXO25|26260|F-box protein 25	2.521154	CTCF.p2:-12:0.556	CTCF.p2:48:0.990	CTCF.p2:-72:0.975
chr12	7791372	7791504	reg1004728.p1	13.211	+	DQ058615 TSC_hg19_v1_chr12_-_7656374 BC051281 AK226017 Z22968 Z22969 Z22970 Z22971 NM_004244 NM_203416	-135088	-	GQ397482 AY358856 AK303372 AF264014 NM_174941 BC104962 BC104964	-194701	-	NM_001080454	-334511	+	U72890 L25877 U72891 BC101405 BC101404 BC101972 BC096158 BC096159 BC096160 BC096161 BC101973 BC144708 NM_001644	27046	-	CU689052 DQ892661 DQ895901 AF110641 AF263538 NM_020634 BC030959 AY358875	56918	-	AY317075 NM_199286 BC125145	72635	+	DQ058615|CD163|9332|CD163 molecule##BC051281|CD163|9332|CD163 molecule##AK226017|CD163|9332|CD163 molecule##Z22968|CD163|9332|CD163 molecule##Z22969|CD163|9332|CD163 molecule##Z22970|CD163|9332|CD163 molecule##Z22971|CD163|9332|CD163 molecule##NM_004244|CD163|9332|CD163 molecule##NM_203416|CD163|9332|CD163 molecule##GQ397482|CD163L1|283316|CD163 molecule-like 1##AK303372|CD163L1|283316|CD163 molecule-like 1##AF264014|CD163L1|283316|CD163 molecule-like 1##NM_174941|CD163L1|283316|CD163 molecule-like 1##BC104962|CD163L1|283316|CD163 molecule-like 1##BC104964|CD163L1|283316|CD163 molecule-like 1##NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4##U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##DQ892661|GDF3|9573|growth differentiation factor 3##DQ895901|GDF3|9573|growth differentiation factor 3##AF110641|GDF3|9573|growth differentiation factor 3##AF263538|GDF3|9573|growth differentiation factor 3##NM_020634|GDF3|9573|growth differentiation factor 3##BC030959|GDF3|9573|growth differentiation factor 3##AY358875|GDF3|9573|growth differentiation factor 3##AY317075|DPPA3|359787|developmental pluripotency associated 3##NM_199286|DPPA3|359787|developmental pluripotency associated 3##BC125145|STELLAR|400206|developmental pluripotency associated 3 pseudogene	0.998364	CTCF.p2:19:0.998
chr15	69022897	69023029	reg1005251.p1	13.210	+	AK289678 NM_001190457	-98637	+	NM_001190456	-114085	+	TSC_hg19_v1_chr15_+_68871402 NM_006091	-151620	+	AB463390 AY349171 BC106719 BC125143 BT007436 DQ893294 DQ896729 U60823 TSC_hg19_v1_chr15_-_69113208 U73477 X75090 AK223280	90186	-	TSC_hg19_v1_chr15_-_69113235 BC007200 BC000608 AF025684 AK312703	90264	-	TSC_hg19_v1_chr15_-_69113264 NM_006305	90297	-	AK289678|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190457|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##AY349171|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC106719|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC125143|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BT007436|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ893294|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ896729|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U60823|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U73477|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##X75090|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK223280|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC007200|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC000608|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AF025684|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK312703|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##NM_006305|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	0.970005	CTCF.p2:-19:0.970
chr22	45371606	45371736	reg1004272.p1	13.210	+	AK001306 NM_001017526 NM_001198726 NM_181335 BC059382 BC067824 BC048280	-223210	+	AK291564 TSC_hg19_v1_chr22_+_45098246 AF177331 AL355192 NM_181334	-273418	+	TSC_hg19_v1_chr22_+_45098090 NM_181333	-273603	+	TSC_hg19_v1_chr22_-_45404785 AK299836 AK297317 AK091480 AX747013 NM_001242450	33158	-	AB489146 CU012999 CU013287 CU680262 CR456448 BC012187 NM_138415	33833	-	TSC_hg19_v1_chr22_-_45405781 AK092243 AX747427 NM_001135862	34123	-	AK001306|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001017526|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001198726|ARHGAP8|23779|Rho GTPase activating protein 8##NM_181335|ARHGAP8|23779|Rho GTPase activating protein 8##BC059382|ARHGAP8|23779|Rho GTPase activating protein 8##BC067824|ARHGAP8|23779|Rho GTPase activating protein 8##BC048280|ARHGAP8|23779|Rho GTPase activating protein 8##AK291564|PRR5|55615|proline rich 5 (renal)##AF177331|PRR5|55615|proline rich 5 (renal)##AL355192|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181334|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181333|PRR5|55615|proline rich 5 (renal)##AK299836|PHF21B|112885|PHD finger protein 21B##AK297317|PHF21B|112885|PHD finger protein 21B##AK091480|PHF21B|112885|PHD finger protein 21B##NM_001242450|PHF21B|112885|PHD finger protein 21B##CU012999|PHF21B|112885|PHD finger protein 21B##CU013287|PHF21B|112885|PHD finger protein 21B##CR456448|PHF21B|112885|PHD finger protein 21B##BC012187|PHF21B|112885|PHD finger protein 21B##NM_138415|PHF21B|112885|PHD finger protein 21B##AK092243|PHF21B|112885|PHD finger protein 21B##NM_001135862|PHF21B|112885|PHD finger protein 21B	0.971311	CTCF.p2:20:0.971
chr8	41470412	41470523	reg1004030.p2	13.210	+	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	-34773	+	TSC_hg19_v1_chr8_+_41386779 AK095334 AK313373	-83695	+	NM_032336 AK299207 BC027454 TSC_hg19_v1_chr8_+_41386745 BC005995	-83730	+	AB587362 AK057898 NM_152568	34408	-	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	52296	-	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	184673	-	NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AK095334|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK313373|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##NM_032336|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK299207|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC027454|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC005995|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic##M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic	0.998272	CTCF.p2:0:0.998
chr14	33180409	33180561	reg1006506.p1	13.208	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-381949	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-633979	+	TSC_hg19_v1_chr14_+_32546223 BC075799	-634240	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	228005	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	1239664	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	1751002	-	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A	0.58745	CTCF.p2:-7:0.286	CTCF.p2:-8:0.302
chr12	44276483	44276612	reg1005467.p1	13.206	+	TSC_hg19_v1_chr12_+_44229883 BC042192 BC060798 AK057287 BC030284 AL136855 NM_032256	-46641	+	AK127868 BT019691 CR541736 CR541761 AB209302 AB384914 TSC_hg19_v1_chr12_-_44200120 AK291223 BC022491 BC022344 U02680 BC068548 EU832120 EU832214 AK297206 BC043148 NM_001242397 NM_002822	-76435	-	TSC_hg19_v1_chr12_+_44152777 BC013316 AY340962 AY340963 AY340964 AY340965 AY340966 AY340967 AF155118 AK000528	-123768	+	D89629 AK315960 AK299277 NM_001145109	992844	-	BC020544 TSC_hg19_v1_chr12_-_45269991	993430	-	TSC_hg19_v1_chr12_-_45270099 AK056082 AK297521 AK309825 D83018	993558	-	BC042192|TMEM117|84216|transmembrane protein 117##BC060798|TMEM117|84216|transmembrane protein 117##AK057287|TMEM117|84216|transmembrane protein 117##BC030284|TMEM117|84216|transmembrane protein 117##AL136855|TMEM117|84216|transmembrane protein 117##NM_032256|TMEM117|84216|transmembrane protein 117##AK127868|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BT019691|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541736|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541761|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AB209302|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK291223|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022491|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022344|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##U02680|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC068548|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832120|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832214|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK297206|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC043148|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_001242397|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_002822|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC013316|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340962|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340963|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340964|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340965|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340966|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340967|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AF155118|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK000528|IRAK4|51135|interleukin-1 receptor-associated kinase 4##D89629|NELL2|4753|NEL-like 2 (chicken)##AK315960|NELL2|4753|NEL-like 2 (chicken)##AK299277|NELL2|4753|NEL-like 2 (chicken)##NM_001145109|NELL2|4753|NEL-like 2 (chicken)##BC020544|NELL2|4753|NEL-like 2 (chicken)##AK056082|NELL2|4753|NEL-like 2 (chicken)##AK297521|NELL2|4753|NEL-like 2 (chicken)##AK309825|NELL2|4753|NEL-like 2 (chicken)##D83018|NELL2|4753|NEL-like 2 (chicken)	0.382832	CTCF.p2:18:0.383
chr20	48806950	48807064	reg1004448.p1	13.206	+	TSC_hg19_v1_chr20_-_48770302 BC144612 NM_001162505 NM_199129 NM_199203	-36689	-	TSC_hg19_v1_chr20_-_48770261 AK023028 AF155120	-36731	-	TSC_hg19_v1_chr20_-_48770251 AB044550 BC018893 BC142966	-36768	-	NM_005194 TSC_hg19_v1_chr20_+_48807197	186	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	374	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	623	+	BC144612|TMEM189|387521|transmembrane protein 189##NM_001162505|TMEM189|387521|transmembrane protein 189##NM_199129|TMEM189|387521|transmembrane protein 189##NM_199203|TMEM189-UBE2V1|387522|TMEM189-UBE2V1 readthrough##AK023028|TMEM189|387521|transmembrane protein 189##AF155120|TMEM189|387521|transmembrane protein 189##AB044550|TMEM189|387521|transmembrane protein 189##BC018893|TMEM189|387521|transmembrane protein 189##BC142966|TMEM189|387521|transmembrane protein 189##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta	0.989494	CTCF.p2:-18:0.989
chr1	110739648	110739763	reg1005588.p1	13.204	+	NM_001010898 AK289982 TSC_hg19_v1_chr1_+_110693135	-46571	+	AK098556 NM_203412 BC058929	-84630	+	AF008203 BC112007 BC113428 NM_006492	-126428	-	TSC_hg19_v1_chr1_+_110753347 NM_001039574 NM_004978	13639	+	AK310193 M64676 TSC_hg19_v1_chr1_+_110754079 BC101769	14292	+	AF368062 AF368063 AF368064 NM_001201545 NM_022768 BC098140 BC103493 BC103507 BC103660 TSC_hg19_v1_chr1_+_110882045	142289	+	NM_001010898|SLC6A17|388662|solute carrier family 6, member 17##AK289982|SLC6A17|388662|solute carrier family 6, member 17##AK098556|UBL4B|164153|ubiquitin-like 4B##NM_203412|UBL4B|164153|ubiquitin-like 4B##BC058929|UBL4B|164153|ubiquitin-like 4B##AF008203|ALX3|257|ALX homeobox 3##BC112007|ALX3|257|ALX homeobox 3##BC113428|ALX3|257|ALX homeobox 3##NM_006492|ALX3|257|ALX homeobox 3##NM_001039574|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_004978|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##AK310193|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##M64676|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##BC101769|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##AF368062|RBM15|64783|RNA binding motif protein 15##AF368063|RBM15|64783|RNA binding motif protein 15##AF368064|RBM15|64783|RNA binding motif protein 15##NM_001201545|RBM15|64783|RNA binding motif protein 15##NM_022768|RBM15|64783|RNA binding motif protein 15##BC098140|RBM15|64783|RNA binding motif protein 15##BC103493|RBM15|64783|RNA binding motif protein 15##BC103507|RBM15|64783|RNA binding motif protein 15##BC103660|RBM15|64783|RNA binding motif protein 15	0.907479	CTCF.p2:7:0.907
chr11	107560453	107560579	reg1005779.p1	13.203	+	TSC_hg19_v1_chr11_+_107462073 BC028725	-98440	+	TSC_hg19_v1_chr11_+_107461998 AK303689 AK054794	-98531	+	TSC_hg19_v1_chr11_+_107461813 AK297351 NM_001130037 NM_018712	-98705	+	BC104185 BC113930 BC113987 BC104150 BC094685 AK312097 BC005261 U96094 NM_003063	22243	-	CU691672 TSC_hg19_v1_chr11_-_107729514 AK023080 BC048302	168989	-	AK300582 TSC_hg19_v1_chr11_-_107729530 BC039195	169072	-	BC028725|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK303689|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK054794|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1##BC104185|SLN|6588|sarcolipin##BC113930|SLN|6588|sarcolipin##BC113987|SLN|6588|sarcolipin##BC104150|SLN|6588|sarcolipin##BC094685|SLN|6588|sarcolipin##AK312097|SLN|6588|sarcolipin##BC005261|SLN|6588|sarcolipin##U96094|SLN|6588|sarcolipin##NM_003063|SLN|6588|sarcolipin##AK023080|SLC35F2|54733|solute carrier family 35, member F2##BC048302|SLC35F2|54733|solute carrier family 35, member F2##AK300582|SLC35F2|54733|solute carrier family 35, member F2##BC039195|SLC35F2|54733|solute carrier family 35, member F2	0.951344	CTCF.p2:9:0.951
chr11	14322391	14322526	reg1004308.p1	13.203	+	TSC_hg19_v1_chr11_+_13984277 NM_006108 AK291780 AK074803 BC136513 BC136563 BC006262 AB051390	-338175	+	AY423606 BC017377 TSC_hg19_v1_chr11_+_13690267 AY600449	-632191	+	TSC_hg19_v1_chr11_+_13690255 AK315527 AK026381	-632205	+	AK309550 AK309683 NM_001177315 NM_001102669	57593	-	TSC_hg19_v1_chr11_-_14380730 BC013106 AK299606 AK313976 NM_012250	58219	-	AK300103 NM_001177314	63593	-	NM_006108|SPON1|10418|spondin 1, extracellular matrix protein##AK291780|SPON1|10418|spondin 1, extracellular matrix protein##AK074803|SPON1|10418|spondin 1, extracellular matrix protein##BC136513|SPON1|10418|spondin 1, extracellular matrix protein##BC136563|SPON1|10418|spondin 1, extracellular matrix protein##AB051390|SPON1|10418|spondin 1, extracellular matrix protein##AY423606|FAR1|84188|fatty acyl CoA reductase 1##BC017377|FAR1|84188|fatty acyl CoA reductase 1##AY600449|FAR1|84188|fatty acyl CoA reductase 1##AK315527|FAR1|84188|fatty acyl CoA reductase 1##AK026381|FAR1|84188|fatty acyl CoA reductase 1##AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##BC013106|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK299606|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK313976|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_012250|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	0.0	
chr1	235247122	235247255	reg1004319.p3	13.203	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-351414	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-501942	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-503330	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	44901	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	45043	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	77375	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.347332	CTCF.p2:21:0.347
chr20	56169478	56169610	reg1003903.p2	13.203	+	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	-33387	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	-69343	-	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-203087	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	25994	-	TSC_hg19_v1_chr20_-_56285017 AF305616 AX775889 NM_020182	115445	-	TSC_hg19_v1_chr20_+_56285236 AK056098	115681	+	NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1##AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	0.999631	CTCF.p2:-7:1.000
chr22	29436778	29436911	reg1005622.p1	13.203	+	AK096397 NM_032173	-123468	+	TSC_hg19_v1_chr22_+_29279579 NM_001206998 AB051436 CR456397	-157067	+	TSC_hg19_v1_chr22_+_29196668 AF086143	-240161	+	TSC_hg19_v1_chr22_+_29449893 BC042614	13081	+	CR456405 BC074758 BC126262 BC126264 AL035364 NM_015370	21005	-	TSC_hg19_v1_chr22_+_29469035 BC063787 NM_001039570 NM_032045 AK056425 AB059618	32178	+	AK096397|ZNRF3|84133|zinc and ring finger 3##NM_032173|ZNRF3|84133|zinc and ring finger 3##NM_001206998|ZNRF3|84133|zinc and ring finger 3##AB051436|ZNRF3|84133|zinc and ring finger 3##CR456397|ZNRF3|84133|zinc and ring finger 3##BC042614|ZNRF3|84133|zinc and ring finger 3##CR456405|C22orf31|25770|chromosome 22 open reading frame 31##BC074758|C22orf31|25770|chromosome 22 open reading frame 31##BC126262|C22orf31|25770|chromosome 22 open reading frame 31##BC126264|C22orf31|25770|chromosome 22 open reading frame 31##AL035364|C22orf31|25770|chromosome 22 open reading frame 31##NM_015370|C22orf31|25770|chromosome 22 open reading frame 31##BC063787|KREMEN1|83999|kringle containing transmembrane protein 1##NM_001039570|KREMEN1|83999|kringle containing transmembrane protein 1##NM_032045|KREMEN1|83999|kringle containing transmembrane protein 1##AK056425|KREMEN1|83999|kringle containing transmembrane protein 1##AB059618|KREMEN1|83999|kringle containing transmembrane protein 1	0.99589	CTCF.p2:12:0.996
chr3	82182271	82182395	reg1005378.p1	13.202	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-147031	+	TSC_hg19_v1_chr3_-_81810971 NM_000158	-371391	-	TSC_hg19_v1_chr3_-_81810866 AB209731 BC012098	-371485	-	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	2825796	+	AF538973 NM_153184	3593298	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	4857918	-	NM_000158|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB209731|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##BC012098|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)	0.817776	CTCF.p2:9:0.818
chr10	61569253	61569399	reg1006594.p1	13.200	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-99602	-	AK299924 NM_001143773	-446666	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-447041	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	96875	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	96998	-	AK292927 AK092527 NM_001149	331390	-	AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	1.009956	CTCF.p2:-12:0.999
chr12	53902442	53902573	reg1006117.p1	13.199	+	BC104234 BC104235 AF005271 NM_003717	-1111	-	NM_134324	-7131	+	TSC_hg19_v1_chr12_+_53895135 AK309569 U08998 AK290737 AK293728 AB464283 BT007140 DQ893549 DQ893931	-7379	+	AB463398 X57197 NM_001130059	92286	-	TSC_hg19_v1_chr12_-_54019764 BC042363 NM_001206683	117228	-	TSC_hg19_v1_chr12_-_54020167 BC136302 X52943 AK298853 AK313507 BC032433 BC140006 NM_001130060 NM_001206682 NM_006856	117646	-	BC104234|NPFF|8620|neuropeptide FF-amide peptide precursor##BC104235|NPFF|8620|neuropeptide FF-amide peptide precursor##AF005271|NPFF|8620|neuropeptide FF-amide peptide precursor##NM_003717|NPFF|8620|neuropeptide FF-amide peptide precursor##NM_134324|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##AK309569|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##U08998|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##AK290737|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##BT007140|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##DQ893549|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##DQ893931|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##X57197|ATF7|11016|activating transcription factor 7##NM_001130059|ATF7|11016|activating transcription factor 7##BC042363|ATF7|11016|activating transcription factor 7##NM_001206683|ATF7|11016|activating transcription factor 7##BC136302|ATF7|11016|activating transcription factor 7##X52943|ATF7|11016|activating transcription factor 7##AK298853|ATF7|11016|activating transcription factor 7##AK313507|ATF7|11016|activating transcription factor 7##BC032433|ATF7|11016|activating transcription factor 7##BC140006|ATF7|11016|activating transcription factor 7##NM_001130060|ATF7|11016|activating transcription factor 7##NM_001206682|ATF7|11016|activating transcription factor 7##NM_006856|ATF7|11016|activating transcription factor 7	1.01148	CTCF.p2:11:0.984
chr16	57118261	57118411	reg1006230.p1	13.199	+	AF389420 EF452236 TSC_hg19_v1_chr16_+_57054697	-63676	+	AK074182 NM_032206	-67351	+	TSC_hg19_v1_chr16_+_57023474 AK097030	-94876	+	TSC_hg19_v1_chr16_+_57126462 NM_152727	8129	+	TSC_hg19_v1_chr16_+_57126513 AF492484 BC053658	8172	+	TSC_hg19_v1_chr16_+_57126530 AK315394	8237	+	AF389420|NLRC5|84166|NLR family, CARD domain containing 5##EF452236|NLRC5|84166|NLR family, CARD domain containing 5##AK074182|NLRC5|84166|NLR family, CARD domain containing 5##NM_032206|NLRC5|84166|NLR family, CARD domain containing 5##AK097030|NLRC5|84166|NLR family, CARD domain containing 5##NM_152727|CPNE2|221184|copine II##AF492484|CPNE2|221184|copine II##BC053658|CPNE2|221184|copine II##AK315394|CPNE2|221184|copine II	0.49077	CTCF.p2:0:0.491
chr3	159724437	159724557	reg1005012.p1	13.198	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	-17765	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	-166638	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	-166804	+	TSC_hg19_v1_chr3_+_159943306 NM_001168214	218840	+	BC031660 TSC_hg19_v1_chr3_+_159943777	219206	+	AB037795 NM_001190242	377001	-	NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80##BC031660|C3orf80|401097|chromosome 3 open reading frame 80##AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	0.971405	CTCF.p2:20:0.971
chr12	3244743	3244865	reg1003812.p1	13.196	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-58242	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-175743	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-176210	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	355637	+	AK125333 TSC_hg19_v1_chr12_-_3601984	357181	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	617464	-	NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B	0.999855	CTCF.p2:6:1.000
chr14	34568021	34568146	reg1004059.p2	13.196	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	-147934	-	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1159593	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1769547	+	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	363404	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	440802	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	531272	-	BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6	0.992917	CTCF.p2:4:0.993
chr9	136023016	136023147	reg1006702.p1	13.195	+	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	-26582	-	NM_001807 S79774 M85201 BC042510 AK299965	-85706	+	TSC_hg19_v1_chr9_+_135906386 AK000194 AK097295 AK293980 BC006409 AY007123 DQ892071 DQ895265 AJ420443 BC030157	-116693	+	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	1605	-	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	16216	-	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	61539	-	AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B	0.998559	CTCF.p2:-6:0.999
chr1	160346424	160346544	reg1004490.p1	13.193	+	M96739 AK313700 NM_005598 BC013789	-9620	+	NM_001098398 NM_004371 U24105	-33081	-	TSC_hg19_v1_chr1_+_160313175 AK299142 AY359120 BC100024 D87442	-33304	+	NM_020335 TSC_hg19_v1_chr1_+_160370394	23895	+	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	146545	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	202763	-	M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##NM_001098398|COPA|1314|coatomer protein complex, subunit alpha##NM_004371|COPA|1314|coatomer protein complex, subunit alpha##U24105|COPA|1314|coatomer protein complex, subunit alpha##AK299142|NCSTN|23385|nicastrin##AY359120|NCSTN|23385|nicastrin##BC100024|NCSTN|23385|nicastrin##D87442|NCSTN|23385|nicastrin##NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule	0.911059	CTCF.p2:11:0.911
chr11	4208910	4209025	reg1005017.p2	13.192	+	TSC_hg19_v1_chr11_+_4116085 AK297988 BC006498 CU675435 DQ893028 DQ896272	-92808	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	-92901	+	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	-92978	+	BC140928 NM_001005161	180648	-	TSC_hg19_v1_chr11_-_4414904 BC010861 M62800 AK225564 NM_003141	205939	-	BC137247 BC137248 NM_001005172	261557	+	AK297988|RRM1|6240|ribonucleotide reductase M1##BC006498|RRM1|6240|ribonucleotide reductase M1##DQ893028|RRM1|6240|ribonucleotide reductase M1##DQ896272|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##BC140928|OR52B4|143496|olfactory receptor, family 52, subfamily B, member 4##NM_001005161|OR52B4|143496|olfactory receptor, family 52, subfamily B, member 4##BC010861|TRIM21|6737|tripartite motif containing 21##M62800|TRIM21|6737|tripartite motif containing 21##AK225564|TRIM21|6737|tripartite motif containing 21##NM_003141|TRIM21|6737|tripartite motif containing 21##BC137247|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##BC137248|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##NM_001005172|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2	0.134606	
chr1	179675616	179675745	reg1004195.p1	13.192	+	AK092142 AX747378 NM_001199092	-100319	+	NM_001199089 AK127370 BC130532 BC144058	-114674	+	AK126889 NM_001199091 NM_001199085 NM_173533	-114929	+	AY902195 BC009382 NM_173509 TSC_hg19_v1_chr1_+_179712397	36671	+	TSC_hg19_v1_chr1_+_179712425 AK310711	36744	+	AK313887 TSC_hg19_v1_chr1_+_179712524	36836	+	AK092142|TDRD5|163589|tudor domain containing 5##NM_001199092|TDRD5|163589|tudor domain containing 5##NM_001199089|TDRD5|163589|tudor domain containing 5##AK127370|TDRD5|163589|tudor domain containing 5##BC130532|TDRD5|163589|tudor domain containing 5##BC144058|TDRD5|163589|tudor domain containing 5##AK126889|TDRD5|163589|tudor domain containing 5##NM_001199091|TDRD5|163589|tudor domain containing 5##NM_001199085|TDRD5|163589|tudor domain containing 5##NM_173533|TDRD5|163589|tudor domain containing 5##AY902195|FAM163A|148753|family with sequence similarity 163, member A##BC009382|FAM163A|148753|family with sequence similarity 163, member A##NM_173509|FAM163A|148753|family with sequence similarity 163, member A##AK310711|FAM163A|148753|family with sequence similarity 163, member A##AK313887|FAM163A|148753|family with sequence similarity 163, member A	0.294853	CTCF.p2:-19:0.295
chr10	134266724	134266870	reg1006084.p1	13.191	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-8114	+	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	-56088	+	TSC_hg19_v1_chr10_+_134145696 AK098652 BC050097 AK295953 AB051461 BC029902 NM_001143757 AK097418	-121087	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	84515	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	332709	-	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	489241	-	BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##AK098652|LRRC27|80313|leucine rich repeat containing 27##BC050097|LRRC27|80313|leucine rich repeat containing 27##AK295953|LRRC27|80313|leucine rich repeat containing 27##AB051461|LRRC27|80313|leucine rich repeat containing 27##BC029902|LRRC27|80313|leucine rich repeat containing 27##NM_001143757|LRRC27|80313|leucine rich repeat containing 27##AK097418|LRRC27|80313|leucine rich repeat containing 27##BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40	0.936446	CTCF.p2:18:0.750
chr19	3108823	3108944	reg1005369.p1	13.191	+	TSC_hg19_v1_chr19_+_3094528 BC096225 BC096226 BC096227 AB463701 AF011497 AF493900 CR457004 AB209435	-14292	+	TSC_hg19_v1_chr19_+_3094359 BC089041 NM_002067	-14525	+	TSC_hg19_v1_chr19_-_3062919 AB527754 HQ258149 BC113735 BC113737 NM_198969 AK094591	-45876	-	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	13510	+	TSC_hg19_v1_chr19_+_3122573 BC051315 CU674752	13722	+	TSC_hg19_v1_chr19_+_3136030 GU727645 NM_002068 M63904 AK300481 AK291329 BC013585 GU727637	27261	+	BC096225|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096226|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096227|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF011497|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF493900|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##CR457004|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AB209435|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC089041|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##NM_002067|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##HQ258149|AES|166|amino-terminal enhancer of split##BC113735|AES|166|amino-terminal enhancer of split##BC113737|AES|166|amino-terminal enhancer of split##NM_198969|AES|166|amino-terminal enhancer of split##AK094591|AES|166|amino-terminal enhancer of split##BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##GU727645|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_002068|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##M63904|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK300481|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK291329|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC013585|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##GU727637|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)	0.993504	CTCF.p2:-13:0.994
chr11	36313990	36314128	reg1005680.p1	13.189	+	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	-3073	-	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	-3106	-	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	-348448	+	NM_001160167 AK055042	3721	+	NM_001160168 NM_024841 BX640959 AK024275	83501	+	NM_001160169	108487	+	AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like##NM_001160168|PRR5L|79899|proline rich 5 like##NM_024841|PRR5L|79899|proline rich 5 like##BX640959|PRR5L|79899|proline rich 5 like##AK024275|PRR5L|79899|proline rich 5 like##NM_001160169|PRR5L|79899|proline rich 5 like	0.669331	CTCF.p2:-29:0.669
chr6	42869340	42869469	reg1004573.p1	13.189	+	HQ257974 TSC_hg19_v1_chr6_-_42858560 BC060325 BC051007 BC073804 BC094854 NM_001008739	-10843	-	TSC_hg19_v1_chr6_+_42847644 AK291310 AK299816 AK021904 AK091341 AK291949 AK297324 BC058020 BC073890 NM_198486 CU687268 EU832458 EU832540	-21752	+	TSC_hg19_v1_chr6_+_42847388 BC064519 S81578 BC036861	-22007	+	NM_001243168 NM_001243169 NM_001243170 NM_138296 U36759 BC069336 BC100771 BC100772 BC100773 BC100774 BC153829 AK130819 AK312223 AK303523 AF101436 AF165312 U38996	14379	+	NM_006586 BC004423 U80744 BC011767 AY358960	27516	+	TSC_hg19_v1_chr6_+_42897217 BC008133	27805	+	HQ257974|C6orf226|441150|chromosome 6 open reading frame 226##BC060325|C6orf226|441150|chromosome 6 open reading frame 226##BC051007|C6orf226|441150|chromosome 6 open reading frame 226##BC073804|C6orf226|441150|chromosome 6 open reading frame 226##BC094854|C6orf226|441150|chromosome 6 open reading frame 226##NM_001008739|C6orf226|441150|chromosome 6 open reading frame 226##AK291310|RPL7L1|285855|ribosomal protein L7-like 1##AK299816|RPL7L1|285855|ribosomal protein L7-like 1##AK021904|RPL7L1|285855|ribosomal protein L7-like 1##AK291949|RPL7L1|285855|ribosomal protein L7-like 1##BC058020|RPL7L1|285855|ribosomal protein L7-like 1##BC073890|RPL7L1|285855|ribosomal protein L7-like 1##NM_198486|RPL7L1|285855|ribosomal protein L7-like 1##EU832458|RPL7L1|285855|ribosomal protein L7-like 1##EU832540|RPL7L1|285855|ribosomal protein L7-like 1##BC064519|RPL7L1|285855|ribosomal protein L7-like 1##BC036861|RPL7L1|285855|ribosomal protein L7-like 1##NM_001243168|PTCRA|171558|pre T-cell antigen receptor alpha##NM_001243169|PTCRA|171558|pre T-cell antigen receptor alpha##NM_001243170|PTCRA|171558|pre T-cell antigen receptor alpha##NM_138296|PTCRA|171558|pre T-cell antigen receptor alpha##U36759|PTCRA|171558|pre T-cell antigen receptor alpha##BC069336|PTCRA|171558|pre T-cell antigen receptor alpha##BC100771|PTCRA|171558|pre T-cell antigen receptor alpha##BC100772|PTCRA|171558|pre T-cell antigen receptor alpha##BC100773|PTCRA|171558|pre T-cell antigen receptor alpha##BC100774|PTCRA|171558|pre T-cell antigen receptor alpha##BC153829|PTCRA|171558|pre T-cell antigen receptor alpha##AK130819|PTCRA|171558|pre T-cell antigen receptor alpha##AK312223|PTCRA|171558|pre T-cell antigen receptor alpha##AF101436|PTCRA|171558|pre T-cell antigen receptor alpha##AF165312|PTCRA|171558|pre T-cell antigen receptor alpha##U38996|PTCRA|171558|pre T-cell antigen receptor alpha##NM_006586|CNPY3|10695|canopy 3 homolog (zebrafish)##BC004423|CNPY3|10695|canopy 3 homolog (zebrafish)##U80744|CNPY3|10695|canopy 3 homolog (zebrafish)##BC011767|CNPY3|10695|canopy 3 homolog (zebrafish)##AY358960|CNPY3|10695|canopy 3 homolog (zebrafish)##BC008133|CNPY3|10695|canopy 3 homolog (zebrafish)	0.959213	CTCF.p2:-25:0.959
chr7	150118240	150118394	reg1005930.p1	13.189	+	BC143767 TSC_hg19_v1_chr7_+_150102384	-15922	+	NM_173680 BC038111	-41890	+	AK226081 AJ245553 NM_014374 BC000363 BC001760 AB529137 CU674178 CU674872 EU446796	-50026	+	BC052099 TSC_hg19_v1_chr7_+_150130817 AK097158 BC109387	12501	+	TSC_hg19_v1_chr7_+_150147882 AK314426	29567	+	TSC_hg19_v1_chr7_+_150147936 NM_175571	29631	+	NM_173680|ZNF775|285971|zinc finger protein 775##BC038111|ZNF775|285971|zinc finger protein 775##AK226081|REPIN1|29803|replication initiator 1##AJ245553|REPIN1|29803|replication initiator 1##NM_014374|REPIN1|29803|replication initiator 1##BC000363|REPIN1|29803|replication initiator 1##BC001760|REPIN1|29803|replication initiator 1##EU446796|REPIN1|29803|replication initiator 1##BC052099|LOC285972|285972|uncharacterized LOC285972##AK097158|LOC285972|285972|uncharacterized LOC285972##BC109387|LOC285972|285972|uncharacterized LOC285972##AK314426|GIMAP8|155038|GTPase, IMAP family member 8##NM_175571|GIMAP8|155038|GTPase, IMAP family member 8	0.883833	CTCF.p2:7:0.884
chr7	45957308	45957422	reg1004185.p1	13.189	+	AF042356 TSC_hg19_v1_chr7_+_45933167	-24231	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-29260	+	TSC_hg19_v1_chr7_-_45808577 AL832059 BC092503	-148775	-	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	3441	-	TSC_hg19_v1_chr7_-_47579207 BC071791	1621844	-	TSC_hg19_v1_chr7_-_47621681 CR749644	1664298	-	NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##AL832059|SEPT7P2|641977|septin 7 pseudogene 2##BC092503|SEPT7P2|641977|septin 7 pseudogene 2##DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3	0.963499	CTCF.p2:-3:0.963
chr1	172714243	172714381	reg1005711.p1	13.188	+	D38122 AK314874 NM_000639 X89102 BC017502 U08137 AF288573 U11821 AB528416 DQ893466 DQ896147 CU675998 AY225406 AY858799	-86063	+	TSC_hg19_v1_chr1_+_172502291 NM_016227 AK302509 AL035291 BC137125 BC144487	-211931	+	TSC_hg19_v1_chr1_+_172502152 AK302949 AJ250075 NM_014283	-212170	+	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	305744	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	460341	-	CR542033 D90224 X79929 NM_003326	462080	-	D38122|FASLG|356|Fas ligand (TNF superfamily, member 6)##AK314874|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_000639|FASLG|356|Fas ligand (TNF superfamily, member 6)##X89102|FASLG|356|Fas ligand (TNF superfamily, member 6)##BC017502|FASLG|356|Fas ligand (TNF superfamily, member 6)##U08137|FASLG|356|Fas ligand (TNF superfamily, member 6)##AF288573|FASLG|356|Fas ligand (TNF superfamily, member 6)##U11821|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ893466|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ896147|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY225406|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY858799|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_016227|C1orf9|51430|chromosome 1 open reading frame 9##AK302509|C1orf9|51430|chromosome 1 open reading frame 9##AL035291|C1orf9|51430|chromosome 1 open reading frame 9##BC137125|C1orf9|51430|chromosome 1 open reading frame 9##BC144487|C1orf9|51430|chromosome 1 open reading frame 9##AK302949|C1orf9|51430|chromosome 1 open reading frame 9##AJ250075|C1orf9|51430|chromosome 1 open reading frame 9##NM_014283|C1orf9|51430|chromosome 1 open reading frame 9##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	0.963444	CTCF.p2:-26:0.963
chr1	228187186	228187331	reg1005585.p1	13.187	+	AB590917 HQ258230 AB060283 AK131041 TSC_hg19_v1_chr1_-_228135634 BC111960 BC113431 NM_003395	-51627	-	BC130400 HQ258179 NM_183062	-183877	+	CU676318 TSC_hg19_v1_chr1_+_227923140 BX648570 AK054633 BC011145 BC007786	-264126	+	NM_033131 AK056278 BC103921 BC103922 BC103923 AB060284	7515	+	AK000620 NM_001024226 NM_001658 TSC_hg19_v1_chr1_+_228270371	83113	+	TSC_hg19_v1_chr1_+_228270422 BC011358 AK293553 AK297792 AK057875 AF052179	83152	+	HQ258230|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AB060283|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AK131041|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC111960|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC113431|WNT9A|7483|wingless-type MMTV integration site family, member 9A##NM_003395|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC130400|PRSS38|339501|protease, serine, 38##HQ258179|PRSS38|339501|protease, serine, 38##NM_183062|PRSS38|339501|protease, serine, 38##BX648570|SNAP47|116841|synaptosomal-associated protein, 47kDa##AK054633|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC011145|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC007786|SNAP47|116841|synaptosomal-associated protein, 47kDa##NM_033131|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK056278|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103921|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103922|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103923|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AB060284|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK000620|ARF1|375|ADP-ribosylation factor 1##NM_001024226|ARF1|375|ADP-ribosylation factor 1##NM_001658|ARF1|375|ADP-ribosylation factor 1##BC011358|ARF1|375|ADP-ribosylation factor 1##AK293553|ARF1|375|ADP-ribosylation factor 1##AK297792|ARF1|375|ADP-ribosylation factor 1##AK057875|ARF1|375|ADP-ribosylation factor 1##AF052179|ARF1|375|ADP-ribosylation factor 1	0.972125	CTCF.p2:-11:0.808
chr15	75061307	75061433	reg1006194.p1	13.187	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-20178	+	AK310810 AM233517 AM233518 AM233519 AM233520 AM236046 AM236047 BC023019 AY871801 K03191 AK223108 AK223113 AK313880 NM_000499	-43577	-	TSC_hg19_v1_chr15_-_74988360 BC011534 BC021271 AK056339 NM_001142443 NM_001142444 NM_025083	-73007	-	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	13055	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	13486	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	43802	+	NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK310810|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233517|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233518|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233519|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233520|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236046|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236047|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC023019|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AY871801|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##K03191|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223108|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223113|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK313880|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##NM_000499|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC011534|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC021271|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK056339|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142443|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142444|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_025083|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like	0.985733	CTCF.p2:3:0.986
chr19	9697505	9697649	reg1005980.p1	13.186	+	AK025435 TSC_hg19_v1_chr19_-_9695178 AK297919 NM_001008727	-2388	-	TSC_hg19_v1_chr19_-_9649291 AB209837 BC001791 NM_024106	-48279	-	BC101039 BC101040 BC101041 BC101042 AK056548 NM_152476	-88317	-	AK122974 BC032668 AK293004 AK304383 NM_152289	34322	-	TSC_hg19_v1_chr19_+_9732192 NM_001242812 BC036632 AK097685 BC143540	34599	+	TSC_hg19_v1_chr19_-_9785743 AK000086	88153	-	AK297919|ZNF121|7675|zinc finger protein 121##NM_001008727|ZNF121|7675|zinc finger protein 121##AB209837|ZNF426|79088|zinc finger protein 426##BC001791|ZNF426|79088|zinc finger protein 426##NM_024106|ZNF426|79088|zinc finger protein 426##BC101039|ZNF560|147741|zinc finger protein 560##BC101040|ZNF560|147741|zinc finger protein 560##BC101041|ZNF560|147741|zinc finger protein 560##BC101042|ZNF560|147741|zinc finger protein 560##AK056548|ZNF560|147741|zinc finger protein 560##NM_152476|ZNF560|147741|zinc finger protein 560##AK122974|ZNF561|93134|zinc finger protein 561##BC032668|ZNF561|93134|zinc finger protein 561##AK293004|ZNF561|93134|zinc finger protein 561##AK304383|ZNF561|93134|zinc finger protein 561##NM_152289|ZNF561|93134|zinc finger protein 561##NM_001242812|LOC284385|284385|uncharacterized LOC284385##AK097685|LOC284385|284385|uncharacterized LOC284385##BC143540|LOC284385|284385|uncharacterized LOC284385##AK000086|ZNF562|54811|zinc finger protein 562	0.947375	CTCF.p2:-9:0.947
chr6	112501439	112501564	reg1005919.p1	13.186	+	NM_001033564 TSC_hg19_v1_chr6_+_112408818 BC044912 AL049461	-92720	+	AF201334 CU689114 CU692994 DQ891503 DQ894695 BC025405 TSC_hg19_v1_chr6_-_112408705 BC031101 AK026242 NM_016262	-92796	-	BC012028 NM_003880 BC035250 NM_198239 BC105940 BC105941 AY358349 AF100781 AY358350 AB075040	-126084	+	TSC_hg19_v1_chr6_-_112575345 AB384677 BT006690 CR407622	73847	-	S78569 TSC_hg19_v1_chr6_-_112575748 BC004241 AK304401 BC026237	74228	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	74304	-	NM_001033564|C6orf225|619208|chromosome 6 open reading frame 225##BC044912|C6orf225|619208|chromosome 6 open reading frame 225##AL049461|C6orf225|619208|chromosome 6 open reading frame 225##AF201334|TUBE1|51175|tubulin, epsilon 1##DQ891503|TUBE1|51175|tubulin, epsilon 1##DQ894695|TUBE1|51175|tubulin, epsilon 1##BC025405|TUBE1|51175|tubulin, epsilon 1##BC031101|TUBE1|51175|tubulin, epsilon 1##AK026242|TUBE1|51175|tubulin, epsilon 1##NM_016262|TUBE1|51175|tubulin, epsilon 1##BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3##AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3##BT006690|LAMA4|3910|laminin, alpha 4##CR407622|LAMA4|3910|laminin, alpha 4##S78569|LAMA4|3910|laminin, alpha 4##BC004241|LAMA4|3910|laminin, alpha 4##AK304401|LAMA4|3910|laminin, alpha 4##BC026237|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4	0.922775	CTCF.p2:-9:0.923
chr14	35882570	35882698	reg1005522.p1	13.185	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	-8710	-	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	-120991	+	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	-121063	+	AF260323 NM_032594 BC130377 BC130379 TSC_hg19_v1_chr14_+_36003369 AB037912 AK096639	120675	+	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	395513	-	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	395761	-	BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AF260323|INSM2|84684|insulinoma-associated 2##NM_032594|INSM2|84684|insulinoma-associated 2##BC130377|INSM2|84684|insulinoma-associated 2##BC130379|INSM2|84684|insulinoma-associated 2##AB037912|INSM2|84684|insulinoma-associated 2##AK096639|INSM2|84684|insulinoma-associated 2##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)	0.97542	CTCF.p2:18:0.975
chr19	11052819	11052955	reg1005335.p1	13.184	+	TSC_hg19_v1_chr19_+_11039470 BC011833 NM_138358 BC007244 BC005075	-13430	+	CU680474 AB463355 AM392632 TSC_hg19_v1_chr19_-_11039312 BC000056 BC013014 NM_024029	-13648	-	TSC_hg19_v1_chr19_+_10982381 AL833242	-70451	+	TSC_hg19_v1_chr19_+_11071705 NM_001128844 NM_003072 AK290033 BC150298 BC139917 BC139924	18759	+	TSC_hg19_v1_chr19_+_11071717 BC007302	18828	+	TSC_hg19_v1_chr19_+_11071720 BC035916	18863	+	BC011833|C19orf52|90580|chromosome 19 open reading frame 52##NM_138358|C19orf52|90580|chromosome 19 open reading frame 52##BC007244|C19orf52|90580|chromosome 19 open reading frame 52##BC005075|C19orf52|90580|chromosome 19 open reading frame 52##AM392632|YIPF2|78992|Yip1 domain family, member 2##BC000056|YIPF2|78992|Yip1 domain family, member 2##BC013014|YIPF2|78992|Yip1 domain family, member 2##NM_024029|YIPF2|78992|Yip1 domain family, member 2##AL833242|CARM1|10498|coactivator-associated arginine methyltransferase 1##NM_001128844|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_003072|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##AK290033|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC150298|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC139917|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC139924|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.843525	CTCF.p2:-6:0.844
chr10	96892808	96892960	reg1007271.p1	13.183	+	M21942 M21941 DQ891400 DQ894579 M17397 M17398 AK303813 Y00498 AK292753 AK293327 AK293328 AK298401 AK315823 BC020596 NM_000770 NM_001198853 NM_001198854 NM_001198855	-63721	-	TSC_hg19_v1_chr10_+_96698414 AK289420 AK298458 BC020754 NM_000771 BC070317 M61855 M61857 BC125054 D00173 M21939 M15331 S46963	-194442	+	M61854 AB463557 NM_000769	-370425	+	AK126134 NM_207321	61072	+	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	157898	-	AM393082 NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_006434	308031	-	M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61854|CYP2C19|1557|cytochrome P450, family 2, subfamily C, polypeptide 19##NM_000769|CYP2C19|1557|cytochrome P450, family 2, subfamily C, polypeptide 19##AK126134|C10orf129|142827|chromosome 10 open reading frame 129##NM_207321|C10orf129|142827|chromosome 10 open reading frame 129##AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1##AM393082|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1##NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1	0.985301	CTCF.p2:-17:0.985
chr9	115607085	115607202	reg1004910.p1	13.183	+	TSC_hg19_v1_chr9_+_115513056 NM_001012994	-94052	+	TSC_hg19_v1_chr9_-_115480398 BC065210 AK310007 BC014881 NM_021218 AK000637	-126755	-	AF161411 TSC_hg19_v1_chr9_-_115480339 AF161409	-126805	-	TSC_hg19_v1_chr9_+_115631819 AK129991	24722	+	CU690566 BC048285 AK314414 AK055571 AF242557 NM_033051	45933	-	AK095843 NM_001101338	167328	-	NM_001012994|SNX30|401548|sorting nexin family member 30##BC065210|C9orf80|58493|chromosome 9 open reading frame 80##AK310007|C9orf80|58493|chromosome 9 open reading frame 80##BC014881|C9orf80|58493|chromosome 9 open reading frame 80##NM_021218|C9orf80|58493|chromosome 9 open reading frame 80##AK000637|C9orf80|58493|chromosome 9 open reading frame 80##AF161411|C9orf80|58493|chromosome 9 open reading frame 80##AF161409|C9orf80|58493|chromosome 9 open reading frame 80##AK129991|SNX30|401548|sorting nexin family member 30##BC048285|SLC46A2|57864|solute carrier family 46, member 2##AK314414|SLC46A2|57864|solute carrier family 46, member 2##AK055571|SLC46A2|57864|solute carrier family 46, member 2##AF242557|SLC46A2|57864|solute carrier family 46, member 2##NM_033051|SLC46A2|57864|solute carrier family 46, member 2##AK095843|ZNF883|169834|zinc finger protein 883##NM_001101338|ZNF883|169834|zinc finger protein 883	0.998971	CTCF.p2:0:0.999
chr15	89721097	89721221	reg1006432.p1	13.182	+	TSC_hg19_v1_chr15_+_89631738 X12433	-89422	+	TSC_hg19_v1_chr15_+_89631708 AL110291 AK222841 AK290340 AK223083 AK296827	-89456	+	TSC_hg19_v1_chr15_+_89631652 BC090052 AF546700 BC019248	-89511	+	AL109729 TSC_hg19_v1_chr15_+_89739320	18119	+	AK312457 BC004199 NM_000326 DQ980611	43747	-	TSC_hg19_v1_chr15_+_89787197 NM_001113378 NM_018193 BC146804	66034	+	X12433|ABHD2|11057|abhydrolase domain containing 2##AL110291|ABHD2|11057|abhydrolase domain containing 2##AK222841|ABHD2|11057|abhydrolase domain containing 2##AK290340|ABHD2|11057|abhydrolase domain containing 2##AK223083|ABHD2|11057|abhydrolase domain containing 2##AK296827|ABHD2|11057|abhydrolase domain containing 2##BC090052|ABHD2|11057|abhydrolase domain containing 2##AF546700|ABHD2|11057|abhydrolase domain containing 2##BC019248|ABHD2|11057|abhydrolase domain containing 2##AL109729|ABHD2|11057|abhydrolase domain containing 2##AK312457|RLBP1|6017|retinaldehyde binding protein 1##BC004199|RLBP1|6017|retinaldehyde binding protein 1##NM_000326|RLBP1|6017|retinaldehyde binding protein 1##DQ980611|RLBP1|6017|retinaldehyde binding protein 1##NM_001113378|FANCI|55215|Fanconi anemia, complementation group I##NM_018193|FANCI|55215|Fanconi anemia, complementation group I##BC146804|FANCI|55215|Fanconi anemia, complementation group I	0.995608	CTCF.p2:0:0.996
chr17	47392964	47393097	reg1004716.p1	13.182	+	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	-84887	-	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-104953	+	NM_001198754	-105095	-	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	46550	-	BC095460 TSC_hg19_v1_chr17_-_47492215	99185	-	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	99218	-	BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC095460|PHB|5245|prohibitin##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin	0.032195	
chr5	177489137	177489245	reg1004219.p1	13.182	+	TSC_hg19_v1_chr5_+_177482580 AB055766	-6613	+	AF076215 NM_006261	-65949	-	AB018295 NM_173663	-281707	-	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	51437	+	TSC_hg19_v1_chr5_+_177558014 AK093481 AK094065 AX748156 AX748436 AK125337	68820	+	TSC_hg19_v1_chr5_+_177558026 BC009911 DQ494789 NM_022762	68841	+	AB055766|RPL19|6143|ribosomal protein L19##AF076215|PROP1|5626|PROP paired-like homeobox 1##NM_006261|PROP1|5626|PROP paired-like homeobox 1##AB018295|FAM153A|285596|family with sequence similarity 153, member A##NM_173663|FAM153A|285596|family with sequence similarity 153, member A##BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3##AK093481|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK094065|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK125337|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##BC009911|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##DQ494789|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##NM_022762|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)	0.817006	CTCF.p2:-22:0.817
chr6	52281477	52281589	reg1004253.p1	13.182	+	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	-54576	+	TSC_hg19_v1_chr6_-_52149551 D38073 AK299566 NM_002388 AK301704	-131954	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	-132013	-	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	3545	+	AK297632 NM_001172420	4271	+	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	160225	-	NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##D38073|MCM3|4172|minichromosome maintenance complex component 3##AK299566|MCM3|4172|minichromosome maintenance complex component 3##NM_002388|MCM3|4172|minichromosome maintenance complex component 3##AK301704|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3##NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2	0.986247	CTCF.p2:-10:0.986
chr8	11271332	11271469	reg1006174.p1	13.181	+	BC038546 TSC_hg19_v1_chr8_-_11205010	-66396	-	AJ291677 NM_054028 BC131696	-82890	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	-129045	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	52829	-	S76617 NM_001715 BC018703 BC004473 BC038555	80193	+	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	290320	+	BC038546|LOC100129129|100129129|uncharacterized LOC100129129##AJ291677|SLC35G5|83650|solute carrier family 35, member G5##NM_054028|SLC35G5|83650|solute carrier family 35, member G5##BC131696|SLC35G5|83650|solute carrier family 35, member G5##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4	0.010694	
chr10	129809719	129809841	reg1005317.p1	13.180	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-104325	+	TSC_hg19_v1_chr10_+_129705334 BC031078 NM_006504	-104458	+	TSC_hg19_v1_chr10_-_129691206 BC029478 NM_152311	-118573	-	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	36074	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	114748	-	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	1455691	+	AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC031078|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_006504|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC029478|CLRN3|119467|clarin 3##NM_152311|CLRN3|119467|clarin 3##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase	0.999124	CTCF.p2:0:0.999
chr17	60498899	60499019	reg1005420.p1	13.180	+	AK098684 NM_173503 BC101752 BC101778	-41033	+	NM_001144933	-51381	+	TSC_hg19_v1_chr17_-_60142600 BC140891 AF117754 NM_005121	-356332	-	TSC_hg19_v1_chr17_+_60501257 NM_181725 BC006985 AB590991 AF161384 AK022822 AF161385	2304	+	TSC_hg19_v1_chr17_+_60556483 NM_001112707 NM_006852 BC044925 AF162667 AX775745 AX775747	57636	+	TSC_hg19_v1_chr17_+_60704751 AB014609 BC153884 NM_006039	205798	+	AK098684|EFCAB3|146779|EF-hand calcium binding domain 3##NM_173503|EFCAB3|146779|EF-hand calcium binding domain 3##BC101752|EFCAB3|146779|EF-hand calcium binding domain 3##BC101778|EFCAB3|146779|EF-hand calcium binding domain 3##NM_001144933|EFCAB3|146779|EF-hand calcium binding domain 3##BC140891|MED13|9969|mediator complex subunit 13##AF117754|MED13|9969|mediator complex subunit 13##NM_005121|MED13|9969|mediator complex subunit 13##NM_181725|METTL2A|339175|methyltransferase like 2A##BC006985|METTL2A|339175|methyltransferase like 2A##AF161384|METTL2A|339175|methyltransferase like 2A##AK022822|METTL2A|339175|methyltransferase like 2A##AF161385|METTL2A|339175|methyltransferase like 2A##NM_001112707|TLK2|11011|tousled-like kinase 2##NM_006852|TLK2|11011|tousled-like kinase 2##BC044925|TLK2|11011|tousled-like kinase 2##AF162667|TLK2|11011|tousled-like kinase 2##AB014609|MRC2|9902|mannose receptor, C type 2##BC153884|MRC2|9902|mannose receptor, C type 2##NM_006039|MRC2|9902|mannose receptor, C type 2	0.098446	
chr8	12724487	12724624	reg1005956.p1	13.180	+	TSC_hg19_v1_chr8_-_12612974 NM_152271	-111551	-	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-430651	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-430712	-	AK296010 NM_020844	78611	+	AB040889 NM_001099677	145217	+	AK299049 NM_001164271	249197	-	NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456##AK299049|DLC1|10395|deleted in liver cancer 1##NM_001164271|DLC1|10395|deleted in liver cancer 1	0.972334	CTCF.p2:-20:0.972
chr12	923483	923588	reg1004188.p1	13.179	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	-60779	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	-61379	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-150820	-	BC013629 TSC_hg19_v1_chr12_+_1017145	93547	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	135291	-	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	176917	+	AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	0.769873	CTCF.p2:9:0.770
chr3	149070368	149070501	reg1006203.p1	13.179	+	NM_001184723 AK313400 BC014339 AL833134 NM_138786	-19032	-	BC070304 NM_000096	-130627	-	AY033141 NM_032383 TSC_hg19_v1_chr3_+_148847453 AK291631 AK055245 BC040359 AK298478 CU691866 DQ891178 DQ894360	-222994	+	TSC_hg19_v1_chr3_-_149086887 X75684	16485	-	CR456953 CU679647 BC010166 TSC_hg19_v1_chr3_-_149095398	24932	-	TSC_hg19_v1_chr3_-_149095436 BC008442	24998	-	NM_001184723|TM4SF18|116441|transmembrane 4 L six family member 18##AK313400|TM4SF18|116441|transmembrane 4 L six family member 18##BC014339|TM4SF18|116441|transmembrane 4 L six family member 18##AL833134|TM4SF18|116441|transmembrane 4 L six family member 18##NM_138786|TM4SF18|116441|transmembrane 4 L six family member 18##BC070304|CP|1356|ceruloplasmin (ferroxidase)##NM_000096|CP|1356|ceruloplasmin (ferroxidase)##AY033141|HPS3|84343|Hermansky-Pudlak syndrome 3##NM_032383|HPS3|84343|Hermansky-Pudlak syndrome 3##AK291631|HPS3|84343|Hermansky-Pudlak syndrome 3##AK055245|HPS3|84343|Hermansky-Pudlak syndrome 3##BC040359|HPS3|84343|Hermansky-Pudlak syndrome 3##AK298478|HPS3|84343|Hermansky-Pudlak syndrome 3##DQ891178|HPS3|84343|Hermansky-Pudlak syndrome 3##DQ894360|HPS3|84343|Hermansky-Pudlak syndrome 3##X75684|TM4SF1|4071|transmembrane 4 L six family member 1##CR456953|TM4SF1|4071|transmembrane 4 L six family member 1##BC010166|TM4SF1|4071|transmembrane 4 L six family member 1##BC008442|TM4SF1|4071|transmembrane 4 L six family member 1	0.0	
chr1	221651518	221651651	reg1005492.p1	13.178	+	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	-598485	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	-598670	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	-598823	+	NM_144728	259217	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	263824	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	263846	-	DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##NM_144728|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10	0.416496	CTCF.p2:-17:0.416
chr16	22584601	22584730	reg1006235.p1	13.178	+	NM_001135865 BC036263 AK296338 CU690320	-59683	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	-198870	-	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	-275917	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	240837	+	AB209794 AF105374 AF105375 NM_006043 BC093734 BC093736	241186	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	575884	-	NM_001135865|LOC100132247|100132247|nuclear pore complex interacting protein related gene##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296338|LOC100132247|100132247|nuclear pore complex interacting protein related gene##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AB209794|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105374|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105375|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_006043|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093734|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093736|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31	0.346922	CTCF.p2:-8:0.347
chr4	169844958	169845107	reg1006389.p1	13.178	+	TSC_hg19_v1_chr4_+_169753245 NM_001166110 AB023209	-91855	+	TSC_hg19_v1_chr4_+_169552755 NM_001166109 AK095512	-292236	+	TSC_hg19_v1_chr4_+_169418204 AF464873 NM_001166108 NM_016081 BC140850 BC144666	-426812	+	BC021973 BC033650 TSC_hg19_v1_chr4_-_169931407 AK027337 AK291756 AK299847 AL833393 NM_032783	86426	-	BC041023 TSC_hg19_v1_chr4_-_170077830	232787	-	TSC_hg19_v1_chr4_-_170192099 BC053671	347015	-	NM_001166110|PALLD|23022|palladin, cytoskeletal associated protein##AB023209|PALLD|23022|palladin, cytoskeletal associated protein##NM_001166109|PALLD|23022|palladin, cytoskeletal associated protein##AK095512|PALLD|23022|palladin, cytoskeletal associated protein##AF464873|PALLD|23022|palladin, cytoskeletal associated protein##NM_001166108|PALLD|23022|palladin, cytoskeletal associated protein##NM_016081|PALLD|23022|palladin, cytoskeletal associated protein##BC140850|PALLD|23022|palladin, cytoskeletal associated protein##BC144666|PALLD|23022|palladin, cytoskeletal associated protein##BC021973|CBR4|84869|carbonyl reductase 4##BC033650|CBR4|84869|carbonyl reductase 4##AK027337|CBR4|84869|carbonyl reductase 4##AK291756|CBR4|84869|carbonyl reductase 4##AL833393|CBR4|84869|carbonyl reductase 4##NM_032783|CBR4|84869|carbonyl reductase 4##BC041023|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1	0.998403	CTCF.p2:2:0.998
chr5	149541305	149541421	reg1004695.p2	13.178	+	BC032224 AB209657 NM_002609 TSC_hg19_v1_chr5_-_149535428	-5939	-	J03278 M30493 TSC_hg19_v1_chr5_-_149535344	-6028	-	M21616 TSC_hg19_v1_chr5_-_149535251 AK293093	-6159	-	TSC_hg19_v1_chr5_+_149546340 NM_001804 AF239666 U51095 BC096249 BC096250 BC096251 BC096252 BC127122 AB463469	5025	+	AK096607 NM_014228 TSC_hg19_v1_chr5_+_149569631 AK312309 AK308895	28221	+	TSC_hg19_v1_chr5_+_149569812 BC093785 BC113425 BC069631 HQ258340 S80071	28487	+	BC032224|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AB209657|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##NM_002609|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##J03278|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##M30493|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##M21616|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AK293093|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##NM_001804|CDX1|1044|caudal type homeobox 1##AF239666|CDX1|1044|caudal type homeobox 1##U51095|CDX1|1044|caudal type homeobox 1##BC096249|CDX1|1044|caudal type homeobox 1##BC096250|CDX1|1044|caudal type homeobox 1##BC096251|CDX1|1044|caudal type homeobox 1##BC096252|CDX1|1044|caudal type homeobox 1##BC127122|CDX1|1044|caudal type homeobox 1##AK096607|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##NM_014228|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK312309|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK308895|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##BC093785|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##BC113425|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##BC069631|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##HQ258340|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##S80071|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	0.998341	CTCF.p2:-3:0.998
chr5	66462078	66462202	reg1005514.p1	13.178	+	AY830839 BC018692 NM_015183	-337537	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-569932	+	BC067770 NM_139168	-1021478	+	BC109069 BC109070 D83597 NM_005582 AK313177	30460	-	TSC_hg19_v1_chr5_+_67511583 NM_181523	1049440	+	TSC_hg19_v1_chr5_+_67511602 BC094795	1049467	+	AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC067770|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_139168|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.985044	CTCF.p2:13:0.985
chr6	188886	189066	reg1004783.p1	13.178	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	103109	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	103521	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	202788	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.614855	CTCF.p2:15:0.373	CTCF.p2:-102:0.242
chr11	119345535	119345665	reg1005808.p1	13.177	+	BC037832 NM_006288	-51357	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-51691	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	-93201	-	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	253782	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	653946	-	AK299472 TSC_hg19_v1_chr11_-_120008323	662672	-	BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29	0.518287	CTCF.p2:5:0.518
chr1	85575213	85575316	reg1004774.p1	13.177	+	NM_145172 AY049724 AK292603 AK054629 BC040265	-47255	+	TSC_hg19_v1_chr1_-_85514184 BX647497 AK314354 NM_001253693 NM_018298	-61066	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	-61119	-	NM_032184 TSC_hg19_v1_chr1_-_85666752	91476	-	AF387611 AF387612 AY486331 AY486332 BC029538 TSC_hg19_v1_chr1_-_85725338 AK126929 NM_198077	150075	-	AK098790 AF105066 AF127386 CU691004 AB527491 EF189176 BC053617 TSC_hg19_v1_chr1_-_85742229 BX647306 AK291346 AF100338 AF057700 AF134395	166871	-	NM_145172|WDR63|126820|WD repeat domain 63##AY049724|WDR63|126820|WD repeat domain 63##AK292603|WDR63|126820|WD repeat domain 63##AK054629|WDR63|126820|WD repeat domain 63##BC040265|WDR63|126820|WD repeat domain 63##BX647497|MCOLN3|55283|mucolipin 3##AK314354|MCOLN3|55283|mucolipin 3##NM_001253693|MCOLN3|55283|mucolipin 3##NM_018298|MCOLN3|55283|mucolipin 3##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3##NM_032184|SYDE2|84144|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)##AF387611|C1orf52|148423|chromosome 1 open reading frame 52##AF387612|C1orf52|148423|chromosome 1 open reading frame 52##AY486331|C1orf52|148423|chromosome 1 open reading frame 52##AY486332|C1orf52|148423|chromosome 1 open reading frame 52##BC029538|C1orf52|148423|chromosome 1 open reading frame 52##AK126929|C1orf52|148423|chromosome 1 open reading frame 52##NM_198077|C1orf52|148423|chromosome 1 open reading frame 52##AF105066|BCL10|8915|B-cell CLL/lymphoma 10##AF127386|BCL10|8915|B-cell CLL/lymphoma 10##EF189176|BCL10|8915|B-cell CLL/lymphoma 10##BC053617|BCL10|8915|B-cell CLL/lymphoma 10##BX647306|BCL10|8915|B-cell CLL/lymphoma 10##AK291346|BCL10|8915|B-cell CLL/lymphoma 10##AF100338|BCL10|8915|B-cell CLL/lymphoma 10##AF057700|BCL10|8915|B-cell CLL/lymphoma 10##AF134395|BCL10|8915|B-cell CLL/lymphoma 10	0.038726	
chr2	11724491	11724628	reg1004534.p2	13.175	+	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-41716	+	TSC_hg19_v1_chr2_+_11682798 BC071853	-41758	+	AF245390 NM_148903 TSC_hg19_v1_chr2_+_11680117	-44456	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	85732	-	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	162216	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	1132694	+	AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1##AF245390|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_148903|GREB1|9687|growth regulation by estrogen in breast cancer 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.762099	CTCF.p2:7:0.762
chr2	150454198	150454324	reg1005040.p1	13.174	+	TSC_hg19_v1_chr2_-_150444290 NM_015702	-9954	-	TSC_hg19_v1_chr2_-_150444250 BC023995 BC010894 AK310001 AF161510 BC022859 BC000932	-10004	-	AF131802 TSC_hg19_v1_chr2_-_150444230 AK313284	-10036	-	X97758 BC012513 TSC_hg19_v1_chr2_-_151344182 AK298007 AK311312 NM_005168 AK313224	889903	-	TSC_hg19_v1_chr2_-_152118378 BC136410 BC136411 AK127552 NM_198557	1664072	-	TSC_hg19_v1_chr2_-_152146171 BC001268	1691891	-	NM_015702|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC023995|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC010894|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK310001|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF161510|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC022859|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC000932|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF131802|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK313284|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##X97758|RND3|390|Rho family GTPase 3##BC012513|RND3|390|Rho family GTPase 3##AK298007|RND3|390|Rho family GTPase 3##NM_005168|RND3|390|Rho family GTPase 3##AK313224|RND3|390|Rho family GTPase 3##BC136410|RBM43|375287|RNA binding motif protein 43##BC136411|RBM43|375287|RNA binding motif protein 43##AK127552|RBM43|375287|RNA binding motif protein 43##NM_198557|RBM43|375287|RNA binding motif protein 43##BC001268|NMI|9111|N-myc (and STAT) interactor	0.91263	CTCF.p2:-15:0.913
chr1	209750195	209750318	reg1005203.p1	13.173	+	AK091113 AX746785 NM_001104548	-148091	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-1332607	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-1665699	-	NM_020439 AK095713 AK289675 AF428261 BC032787	6804	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	74423	-	L25541 NM_001127641 D37766 TSC_hg19_v1_chr1_-_209825771 AK296851 AK309524	75468	-	NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3##L25541|LAMB3|3914|laminin, beta 3##NM_001127641|LAMB3|3914|laminin, beta 3##D37766|LAMB3|3914|laminin, beta 3##AK296851|LAMB3|3914|laminin, beta 3##AK309524|LAMB3|3914|laminin, beta 3	1.045583	CTCF.p2:-7:0.990
chr6	149403515	149403652	reg1004841.p1	13.173	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-335374	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-739392	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-739593	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	235520	+	AK315038 NM_015093 AK307650	235858	+	AY340238 NM_001002255 BC130305 HQ258040	317925	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.528364	CTCF.p2:-4:0.528
chr17	36833437	36833550	reg1004323.p1	13.171	+	TSC_hg19_v1_chr17_-_36831211 NM_001130677	-2308	-	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	-71297	-	BC029278 TSC_hg19_v1_chr17_-_36760969	-72555	-	TSC_hg19_v1_chr17_+_36861421 BC064612	28106	+	TSC_hg19_v1_chr17_+_36861879 AK310435 AK310437 NM_005937 AB384930 CU687922 U07932 AB209633	28397	+	TSC_hg19_v1_chr17_+_36886574 NM_001136498 AK097047 BC062294	53139	+	NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96##AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC064612|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##NM_001136498|CISD3|284106|CDGSH iron sulfur domain 3##AK097047|CISD3|284106|CDGSH iron sulfur domain 3##BC062294|CISD3|284106|CDGSH iron sulfur domain 3	0.057399	
chr1	12178793	12178898	reg1003412.p2	13.170	+	M83554 NM_001243 BC136400 BC171762 S75768	-55301	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-99275	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-99311	+	D86042 BC063482 NM_152942 BC073839 BC141804	7171	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	48216	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	48266	+	M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.999874	CTCF.p2:7:1.000
chr7	38358542	38358666	reg1004276.p1	13.170	+	BC062761 BC105589 AF151103 NM_001003799 NM_001003806	-45365	-	TSC_hg19_v1_chr7_+_38217932 AK091579 AX747072 AJ492267 AY358645 BC005959	-140646	+	NM_032016 AK315404 TSC_hg19_v1_chr7_+_38217846	-140776	+	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	16600	-	Y00482 TSC_hg19_v1_chr7_-_38389512	30872	-	TSC_hg19_v1_chr7_-_38389583 BC035592	30985	-	BC062761|TRGV9|6983|T cell receptor gamma variable 9##BC105589|TARP|445347|TCR gamma alternate reading frame protein##AF151103|TARP|445347|TCR gamma alternate reading frame protein##NM_001003799|TARP|445347|TCR gamma alternate reading frame protein##NM_001003806|TARP|445347|TCR gamma alternate reading frame protein##AK091579|STARD3NL|83930|STARD3 N-terminal like##AJ492267|STARD3NL|83930|STARD3 N-terminal like##AY358645|STARD3NL|83930|STARD3 N-terminal like##BC005959|STARD3NL|83930|STARD3 N-terminal like##NM_032016|STARD3NL|83930|STARD3 N-terminal like##AK315404|STARD3NL|83930|STARD3 N-terminal like##BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)##BC035592|TRGV5|6978|T cell receptor gamma variable 5	0.020022	
chr10	76025906	76026022	reg1005305.p1	13.167	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-89377	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-89434	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-89482	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	560390	+	AY686755 NM_001003892 BC137321 BC137322	792341	-	AB027004 AB103375 NM_016364	833283	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.275706	CTCF.p2:-6:0.276
chr15	75801423	75801536	reg1004854.p1	13.167	+	AL832463 NM_001145357	-53356	-	TSC_hg19_v1_chr15_-_75744032 AK096477 NM_001145358	-57422	-	BC137098 BC137099 AF418569 AK027559 NM_015477 BC066364 TSC_hg19_v1_chr15_-_75744028 BX649162	-57577	-	CU687108 TSC_hg19_v1_chr15_-_75871151 BT007405 CU679831 DQ890986 BC010863	69640	-	TSC_hg19_v1_chr15_-_75871604 M83738 NM_002833	70087	-	TSC_hg19_v1_chr15_-_75871631 BC071574	70153	-	AL832463|SIN3A|25942|SIN3 transcription regulator homolog A (yeast)##NM_001145357|SIN3A|25942|SIN3 transcription regulator homolog A (yeast)##AK096477|SIN3A|25942|SIN3 transcription regulator homolog A (yeast)##NM_001145358|SIN3A|25942|SIN3 transcription regulator homolog A (yeast)##BC137098|SIN3A|25942|SIN3 transcription regulator homolog A (yeast)##BC137099|SIN3A|25942|SIN3 transcription regulator homolog A (yeast)##AF418569|SIN3A|25942|SIN3 transcription regulator homolog A (yeast)##AK027559|SIN3A|25942|SIN3 transcription regulator homolog A (yeast)##NM_015477|SIN3A|25942|SIN3 transcription regulator homolog A (yeast)##BC066364|SIN3A|25942|SIN3 transcription regulator homolog A (yeast)##BX649162|SIN3A|25942|SIN3 transcription regulator homolog A (yeast)##BT007405|PTPN9|5780|protein tyrosine phosphatase, non-receptor type 9##DQ890986|PTPN9|5780|protein tyrosine phosphatase, non-receptor type 9##BC010863|PTPN9|5780|protein tyrosine phosphatase, non-receptor type 9##M83738|PTPN9|5780|protein tyrosine phosphatase, non-receptor type 9##NM_002833|PTPN9|5780|protein tyrosine phosphatase, non-receptor type 9##BC071574|PTPN9|5780|protein tyrosine phosphatase, non-receptor type 9	0.128343	
chr10	105472798	105472928	reg1005052.p1	13.166	+	TSC_hg19_v1_chr10_-_105452931 AK294736 AK295314 AK315983 AK295660	-19913	-	TSC_hg19_v1_chr10_-_105437934 AK304828	-34942	-	TSC_hg19_v1_chr10_-_105421464 AK294454	-51414	-	TSC_hg19_v1_chr10_-_105615306 NM_014631	142407	-	TSC_hg19_v1_chr10_-_105677943 BC017400	205066	-	TSC_hg19_v1_chr10_-_105677986 NM_024928	205152	-	AK294736|SH3PXD2A|9644|SH3 and PX domains 2A##AK295314|SH3PXD2A|9644|SH3 and PX domains 2A##AK315983|SH3PXD2A|9644|SH3 and PX domains 2A##AK295660|SH3PXD2A|9644|SH3 and PX domains 2A##AK304828|SH3PXD2A|9644|SH3 and PX domains 2A##AK294454|SH3PXD2A|9644|SH3 and PX domains 2A##NM_014631|SH3PXD2A|9644|SH3 and PX domains 2A##BC017400|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1##NM_024928|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1	0.0	
chr2	188317895	188318039	reg1006391.p1	13.166	+	DQ280491 U17473 L76380 AK291630 AK292998 DQ280490 NM_005795	-5021	-	AK128006 BC031094 NM_182521	-604071	-	TSC_hg19_v1_chr2_+_187558788 AK091423 AK289737 AX746973 BC060872 NM_177454 AF361495 CU687488	-759191	+	J03225 AF021834 TSC_hg19_v1_chr2_-_188419163 AK313562 BC015514 BC014332	101143	-	TSC_hg19_v1_chr2_-_188419185 NM_001032281 NM_006287	101234	-	AK055718 NM_001252668 NM_001252669 NM_016315 TSC_hg19_v1_chr2_+_189156445	838458	+	DQ280491|CALCRL|10203|calcitonin receptor-like##U17473|CALCRL|10203|calcitonin receptor-like##L76380|CALCRL|10203|calcitonin receptor-like##AK291630|CALCRL|10203|calcitonin receptor-like##AK292998|CALCRL|10203|calcitonin receptor-like##NM_005795|CALCRL|10203|calcitonin receptor-like##AK128006|ZSWIM2|151112|zinc finger, SWIM-type containing 2##BC031094|ZSWIM2|151112|zinc finger, SWIM-type containing 2##NM_182521|ZSWIM2|151112|zinc finger, SWIM-type containing 2##AK091423|FAM171B|165215|family with sequence similarity 171, member B##AK289737|FAM171B|165215|family with sequence similarity 171, member B##BC060872|FAM171B|165215|family with sequence similarity 171, member B##NM_177454|FAM171B|165215|family with sequence similarity 171, member B##AF361495|FAM171B|165215|family with sequence similarity 171, member B##J03225|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AF021834|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK313562|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC015514|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC014332|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK055718|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252668|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252669|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_016315|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	0.949162	CTCF.p2:23:0.949
chr2	243175788	243175916	reg1006533.p1	13.166	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	-144993	+	AK090909 AX746675 BC113517 BC113519 NM_173821	-363970	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	-374828	-	None	None	None	None	None	None	None	None	None	AK298283|LOC728323|728323|uncharacterized LOC728323##AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1	0.925753	CTCF.p2:-4:0.914
chr19	39360581	39360683	reg1004713.p1	13.165	+	TSC_hg19_v1_chr19_-_39342988 AK292115 NM_001005335 AK301062	-17656	-	AB587509 TSC_hg19_v1_chr19_-_39340622 AB044547 NM_001533	-20007	-	AK298384 TSC_hg19_v1_chr19_-_39340578	-20056	-	TSC_hg19_v1_chr19_-_39368901 AK127808 AK126119 AK298327 NM_001195833 NM_198445	8278	-	TSC_hg19_v1_chr19_+_39390332 NM_001243116 AB362577	29669	+	TSC_hg19_v1_chr19_-_39390229 AK314492 AB009274 AF160214 AY030277 AF095714 AK025876 AK225824 AK054642 AK094810 BC003012 BC003547 AF083107 NM_012237 NM_001193286 NM_030593	29702	-	AK292115|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##NM_001005335|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AK301062|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AB044547|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##NM_001533|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AK298384|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AK127808|RINL|126432|Ras and Rab interactor-like##AK126119|RINL|126432|Ras and Rab interactor-like##AK298327|RINL|126432|Ras and Rab interactor-like##NM_001195833|RINL|126432|Ras and Rab interactor-like##NM_198445|RINL|126432|Ras and Rab interactor-like##NM_001243116|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##AK314492|SIRT2|22933|sirtuin 2##AB009274|SIRT2|22933|sirtuin 2##AF160214|SIRT2|22933|sirtuin 2##AY030277|SIRT2|22933|sirtuin 2##AF095714|SIRT2|22933|sirtuin 2##AK025876|SIRT2|22933|sirtuin 2##AK225824|SIRT2|22933|sirtuin 2##AK054642|SIRT2|22933|sirtuin 2##AK094810|SIRT2|22933|sirtuin 2##BC003012|SIRT2|22933|sirtuin 2##BC003547|SIRT2|22933|sirtuin 2##AF083107|SIRT2|22933|sirtuin 2##NM_012237|SIRT2|22933|sirtuin 2##NM_001193286|SIRT2|22933|sirtuin 2##NM_030593|SIRT2|22933|sirtuin 2	0.912247	CTCF.p2:15:0.912
chr17	10517985	10518121	reg1006469.p1	13.160	+	NM_001100112 BC093082 AK299440 AK300702 AK308102 BX510904 NM_017534	-65076	-	AK310004 NM_005963	-96195	-	AF111783 NM_017533	-145178	-	NM_002470 TSC_hg19_v1_chr17_-_10560627	42574	-	TSC_hg19_v1_chr17_-_10600869 DQ891605 DQ894798 AF026852 AF183424 BC015504 AK098826 AK315595 AK074588 NM_004589	82800	-	NM_020233 BC070155 AB073393 AK292629 BC001294	82895	+	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult##NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult##AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_002470|MYH3|4621|myosin, heavy chain 3, skeletal muscle, embryonic##DQ891605|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##DQ894798|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF026852|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF183424|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##BC015504|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK098826|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK315595|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK074588|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_004589|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_020233|C17orf48|56985|chromosome 17 open reading frame 48##BC070155|C17orf48|56985|chromosome 17 open reading frame 48##AB073393|C17orf48|56985|chromosome 17 open reading frame 48##AK292629|C17orf48|56985|chromosome 17 open reading frame 48##BC001294|C17orf48|56985|chromosome 17 open reading frame 48	0.947027	CTCF.p2:5:0.947
chr2	233305395	233305511	reg1004105.p1	13.160	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	-33877	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	-62070	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-479093	+	AK313163 NM_001631 BC132678 M31008 M15694	15417	+	AB030579 Y16187 AY358923 NM_004826 BC050453	47080	-	NM_001195129	79719	+	NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal##AB030579|ECEL1|9427|endothelin converting enzyme-like 1##Y16187|ECEL1|9427|endothelin converting enzyme-like 1##AY358923|ECEL1|9427|endothelin converting enzyme-like 1##NM_004826|ECEL1|9427|endothelin converting enzyme-like 1##BC050453|ECEL1|9427|endothelin converting enzyme-like 1##NM_001195129|PRSS56|646960|protease, serine, 56	0.999942	CTCF.p2:-7:1.000
chr13	46292321	46292439	reg1004821.p2	13.159	+	AK093129 AX747942 NM_152719	-15935	+	BC131494 AK057244 NM_182542	-102515	-	TSC_hg19_v1_chr13_+_46039081 NM_031431 AF349676 AF332595 AK026305 AK225466 AK225952 BX648211 AK294959 AK304248 AK314387 BC038953 CU691622	-253283	+	AK096522 AB463764 BC041372 NM_198849	133420	-	BC019000 TSC_hg19_v1_chr13_-_46626864 AK056422 AY283618 NM_015070	334503	-	TSC_hg19_v1_chr13_+_46626953 AK095119 AK124928	334591	+	AK093129|SPERT|220082|spermatid associated##NM_152719|SPERT|220082|spermatid associated##BC131494|FAM194B|220081|family with sequence similarity 194, member B##AK057244|FAM194B|220081|family with sequence similarity 194, member B##NM_182542|FAM194B|220081|family with sequence similarity 194, member B##NM_031431|COG3|83548|component of oligomeric golgi complex 3##AF349676|COG3|83548|component of oligomeric golgi complex 3##AF332595|COG3|83548|component of oligomeric golgi complex 3##AK026305|COG3|83548|component of oligomeric golgi complex 3##AK225466|COG3|83548|component of oligomeric golgi complex 3##AK225952|COG3|83548|component of oligomeric golgi complex 3##BX648211|COG3|83548|component of oligomeric golgi complex 3##AK294959|COG3|83548|component of oligomeric golgi complex 3##AK304248|COG3|83548|component of oligomeric golgi complex 3##AK314387|COG3|83548|component of oligomeric golgi complex 3##BC038953|COG3|83548|component of oligomeric golgi complex 3##BC041372|SIAH3|283514|seven in absentia homolog 3 (Drosophila)##NM_198849|SIAH3|283514|seven in absentia homolog 3 (Drosophila)##BC019000|ZC3H13|23091|zinc finger CCCH-type containing 13##AK056422|ZC3H13|23091|zinc finger CCCH-type containing 13##AY283618|ZC3H13|23091|zinc finger CCCH-type containing 13##NM_015070|ZC3H13|23091|zinc finger CCCH-type containing 13##AK095119|LOC100509894|100509894|uncharacterized LOC100509894##AK124928|LOC100509894|100509894|uncharacterized LOC100509894	0.694392	CTCF.p2:15:0.694
chr19	46184867	46185000	reg1006274.p1	13.159	+	NM_000164 U39231 BC093723 BC101673 BC143300 BC143302 S79852	-13426	+	AK308580 AK296258 AK294668 NM_001193268 BC029304	-36210	-	AK295905 NM_001193269	-37949	-	BC000486 TSC_hg19_v1_chr19_-_46195193 U15008 AK291912	10263	-	NM_004597 NM_177542	10509	-	NM_001163377 NM_017659	10807	+	NM_000164|GIPR|2696|gastric inhibitory polypeptide receptor##U39231|GIPR|2696|gastric inhibitory polypeptide receptor##BC093723|GIPR|2696|gastric inhibitory polypeptide receptor##BC101673|GIPR|2696|gastric inhibitory polypeptide receptor##BC143300|GIPR|2696|gastric inhibitory polypeptide receptor##BC143302|GIPR|2696|gastric inhibitory polypeptide receptor##S79852|GIPR|2696|gastric inhibitory polypeptide receptor##AK296258|EML2|24139|echinoderm microtubule associated protein like 2##AK294668|EML2|24139|echinoderm microtubule associated protein like 2##NM_001193268|EML2|24139|echinoderm microtubule associated protein like 2##BC029304|EML2|24139|echinoderm microtubule associated protein like 2##AK295905|EML2|24139|echinoderm microtubule associated protein like 2##NM_001193269|EML2|24139|echinoderm microtubule associated protein like 2##BC000486|SNRPD2|6633|small nuclear ribonucleoprotein D2 polypeptide 16.5kDa##U15008|SNRPD2|6633|small nuclear ribonucleoprotein D2 polypeptide 16.5kDa##AK291912|SNRPD2|6633|small nuclear ribonucleoprotein D2 polypeptide 16.5kDa##NM_004597|SNRPD2|6633|small nuclear ribonucleoprotein D2 polypeptide 16.5kDa##NM_177542|SNRPD2|6633|small nuclear ribonucleoprotein D2 polypeptide 16.5kDa##NM_001163377|QPCTL|54814|glutaminyl-peptide cyclotransferase-like##NM_017659|QPCTL|54814|glutaminyl-peptide cyclotransferase-like	0.9803	CTCF.p2:3:0.980
chr9	125572726	125572844	reg1004654.p2	13.158	+	BC137033 BC137034 AB529306 NM_080859	-10400	+	BC136700 BC136701 NM_001001923	-21605	+	AB529307 NM_001004453	-60713	+	BC017227 TSC_hg19_v1_chr9_-_125590868 AL117602 AF031463 AK313429 NM_005388	18086	-	BC044642 AL833177 TSC_hg19_v1_chr9_-_125667584 NM_001100588 NM_018835	94759	-	X82018 AK292401 BC037282 NM_006626	102804	-	BC137033|OR1K1|392392|olfactory receptor, family 1, subfamily K, member 1##BC137034|OR1K1|392392|olfactory receptor, family 1, subfamily K, member 1##NM_080859|OR1K1|392392|olfactory receptor, family 1, subfamily K, member 1##BC136700|OR5C1|392391|olfactory receptor, family 5, subfamily C, member 1##BC136701|OR5C1|392391|olfactory receptor, family 5, subfamily C, member 1##NM_001001923|OR5C1|392391|olfactory receptor, family 5, subfamily C, member 1##NM_001004453|OR1L6|392390|olfactory receptor, family 1, subfamily L, member 6##BC017227|PDCL|5082|phosducin-like##AL117602|PDCL|5082|phosducin-like##AF031463|PDCL|5082|phosducin-like##AK313429|PDCL|5082|phosducin-like##NM_005388|PDCL|5082|phosducin-like##BC044642|RC3H2|54542|ring finger and CCCH-type domains 2##AL833177|RC3H2|54542|ring finger and CCCH-type domains 2##NM_001100588|RC3H2|54542|ring finger and CCCH-type domains 2##NM_018835|RC3H2|54542|ring finger and CCCH-type domains 2##X82018|ZBTB6|10773|zinc finger and BTB domain containing 6##AK292401|ZBTB6|10773|zinc finger and BTB domain containing 6##BC037282|ZBTB6|10773|zinc finger and BTB domain containing 6##NM_006626|ZBTB6|10773|zinc finger and BTB domain containing 6	0.534915	CTCF.p2:9:0.535
chr11	33709562	33709683	reg1003444.p2	13.157	+	TSC_hg19_v1_chr11_+_33563772 AK124395 NM_012194	-145798	+	TSC_hg19_v1_chr11_+_33363104 AK304063	-346478	+	TSC_hg19_v1_chr11_+_33350077 AY425958	-359512	+	NM_001166692	12663	-	AK309894 NM_001127223 NM_001127225 NM_001127226	34650	-	NM_001127227	34875	-	AK124395|C11orf41|25758|chromosome 11 open reading frame 41##NM_012194|C11orf41|25758|chromosome 11 open reading frame 41##AK304063|HIPK3|10114|homeodomain interacting protein kinase 3##AY425958|HIPK3|10114|homeodomain interacting protein kinase 3##NM_001166692|C11orf91|100131378|chromosome 11 open reading frame 91##AK309894|CD59|966|CD59 molecule, complement regulatory protein##NM_001127223|CD59|966|CD59 molecule, complement regulatory protein##NM_001127225|CD59|966|CD59 molecule, complement regulatory protein##NM_001127226|CD59|966|CD59 molecule, complement regulatory protein##NM_001127227|CD59|966|CD59 molecule, complement regulatory protein	0.998339	CTCF.p2:6:0.998
chr6	5215145	5215259	reg1004536.p1	13.157	+	NM_001145115	-129483	+	TSC_hg19_v1_chr6_+_5030223 BC042032 BC133670	-184969	+	TSC_hg19_v1_chr6_-_5004262 BC017871 NM_006638	-210932	-	AF088060 EU831799 EU831876 TSC_hg19_v1_chr6_-_5260976 AK309661 AK291158 BC067762 AF170070 AF285118 BC009552	45795	-	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	45964	-	TSC_hg19_v1_chr6_+_5261294 AK312454	46060	+	NM_001145115|PPP1R3G|648791|protein phosphatase 1, regulatory subunit 3G##BC042032|LOC100129461|100129461|uncharacterized LOC100129461##BC133670|LOC100129461|100129461|uncharacterized LOC100129461##BC017871|RPP40|10799|ribonuclease P/MRP 40kDa subunit##NM_006638|RPP40|10799|ribonuclease P/MRP 40kDa subunit##AF088060|LYRM4|57128|LYR motif containing 4##EU831799|LYRM4|57128|LYR motif containing 4##EU831876|LYRM4|57128|LYR motif containing 4##AK309661|LYRM4|57128|LYR motif containing 4##AK291158|LYRM4|57128|LYR motif containing 4##BC067762|LYRM4|57128|LYR motif containing 4##AF170070|LYRM4|57128|LYR motif containing 4##AF285118|LYRM4|57128|LYR motif containing 4##BC009552|LYRM4|57128|LYR motif containing 4##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial	0.054419	
chr2	74710406	74710537	reg1005391.p1	13.156	+	NM_032779	-115	-	TSC_hg19_v1_chr2_+_74710207 BC060805 NM_022492 BC045536 AK090520 AX746494 AK022850 AK225626 AK303105 AK303245 BC096709 BC098114 BC098365 BC099729 AK223355 AK301585 BC036017 BX648131 BC047084	-264	+	HQ258495 TSC_hg19_v1_chr2_-_74710051 BC117269 BC143398 BC143399 AK075543	-411	-	AB464605 BC150517 TSC_hg19_v1_chr2_-_74726719 AY203953	16282	-	TSC_hg19_v1_chr2_+_74729717 AK125271	19278	+	TSC_hg19_v1_chr2_+_74730272 BC009264 AK096725	19812	+	NM_032779|CCDC142|84865|coiled-coil domain containing 142##BC060805|TTC31|64427|tetratricopeptide repeat domain 31##NM_022492|TTC31|64427|tetratricopeptide repeat domain 31##BC045536|TTC31|64427|tetratricopeptide repeat domain 31##AK090520|TTC31|64427|tetratricopeptide repeat domain 31##AK022850|TTC31|64427|tetratricopeptide repeat domain 31##AK225626|TTC31|64427|tetratricopeptide repeat domain 31##AK303105|TTC31|64427|tetratricopeptide repeat domain 31##AK303245|TTC31|64427|tetratricopeptide repeat domain 31##BC096709|TTC31|64427|tetratricopeptide repeat domain 31##BC098114|TTC31|64427|tetratricopeptide repeat domain 31##BC098365|TTC31|64427|tetratricopeptide repeat domain 31##BC099729|TTC31|64427|tetratricopeptide repeat domain 31##AK223355|TTC31|64427|tetratricopeptide repeat domain 31##AK301585|TTC31|64427|tetratricopeptide repeat domain 31##BC036017|TTC31|64427|tetratricopeptide repeat domain 31##BX648131|TTC31|64427|tetratricopeptide repeat domain 31##BC047084|TTC31|64427|tetratricopeptide repeat domain 31##HQ258495|CCDC142|84865|coiled-coil domain containing 142##BC117269|CCDC142|84865|coiled-coil domain containing 142##BC143398|CCDC142|84865|coiled-coil domain containing 142##BC143399|CCDC142|84865|coiled-coil domain containing 142##AK075543|CCDC142|84865|coiled-coil domain containing 142##BC150517|LBX2|85474|ladybird homeobox 2##AY203953|LBX2|85474|ladybird homeobox 2##AK125271|LOC151534|151534|uncharacterized LOC151534##BC009264|LOC151534|151534|uncharacterized LOC151534##AK096725|LOC151534|151534|uncharacterized LOC151534	0.283384	CTCF.p2:6:0.217
chr12	117141144	117141251	reg1003712.p1	13.155	+	NM_001085481	-144012	+	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	-169968	+	TSC_hg19_v1_chr12_-_116715263 AY338463	-426037	-	TSC_hg19_v1_chr12_-_117175822 AK309652 BC019843 AK025068 NM_024738	34541	-	TSC_hg19_v1_chr12_-_117175868 AK222983 AK298857	34672	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	34922	+	NM_001085481|MAP1LC3B2|643246|microtubule-associated protein 1 light chain 3 beta 2##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173##AY338463|MED13L|23389|mediator complex subunit 13-like##AK309652|C12orf49|79794|chromosome 12 open reading frame 49##BC019843|C12orf49|79794|chromosome 12 open reading frame 49##AK025068|C12orf49|79794|chromosome 12 open reading frame 49##NM_024738|C12orf49|79794|chromosome 12 open reading frame 49##AK222983|C12orf49|79794|chromosome 12 open reading frame 49##AK298857|C12orf49|79794|chromosome 12 open reading frame 49##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2	0.998328	CTCF.p2:-3:0.998
chr19	13895876	13896001	reg1005655.p1	13.154	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-10654	+	TSC_hg19_v1_chr19_+_13885269 NM_014047	-10673	+	TSC_hg19_v1_chr19_+_13875374 AY358176 BC001703 EU832338 EU832423 AM392616 AM393224 AB528180	-20547	+	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	10307	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	51164	-	BC101209 BC101210 NM_001098622	92124	+	BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##NM_014047|C19orf53|28974|chromosome 19 open reading frame 53##AY358176|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)##BC001703|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)##EU832338|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)##EU832423|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)##AM392616|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)##AM393224|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)##AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)	0.461972	CTCF.p2:-9:0.462
chr10	69457544	69457666	reg1005653.p1	13.153	+	AF091606 AK313882 NM_013266	-1668	-	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	-32209	-	NM_178011 BX640611 AY358315 BC111492	-771790	+	CR457184 AF176013 BC017018 AK289537 AF176012 NM_021800 NM_201262	140247	-	TSC_hg19_v1_chr10_+_69644413 AF083106 NM_012238 AF235040	186802	+	AL136741 BC012499 TSC_hg19_v1_chr10_+_69644874	187187	+	AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##CR457184|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176013|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##BC017018|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AK289537|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176012|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_021800|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_201262|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF083106|SIRT1|23411|sirtuin 1##NM_012238|SIRT1|23411|sirtuin 1##AF235040|SIRT1|23411|sirtuin 1##AL136741|SIRT1|23411|sirtuin 1##BC012499|SIRT1|23411|sirtuin 1	0.011024	
chr17	17258329	17258464	reg1004126.p1	13.153	+	TSC_hg19_v1_chr17_+_17206686 AF210652 NM_020201 BC035838	-51731	+	TSC_hg19_v1_chr17_-_17184612 BC001891 NM_003653	-73791	-	AB529019 CU674916 AK297706 AF031647 TSC_hg19_v1_chr17_-_17184588 AF098109 AK312476	-73852	-	NM_001243312	64261	+	TSC_hg19_v1_chr17_+_17380313 AK001055 NM_018019 BC000647 BC010906 BC104988 BC112029 AB463869	121919	+	TSC_hg19_v1_chr17_+_17398334 CU676147	139990	+	AF210652|NT5M|56953|5',3'-nucleotidase, mitochondrial##NM_020201|NT5M|56953|5',3'-nucleotidase, mitochondrial##BC035838|NT5M|56953|5',3'-nucleotidase, mitochondrial##BC001891|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##NM_003653|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AK297706|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AF031647|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AF098109|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AK312476|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##NM_001243312|SMCR9|140776|Smith-Magenis syndrome chromosome region, candidate 9##AK001055|MED9|55090|mediator complex subunit 9##NM_018019|MED9|55090|mediator complex subunit 9##BC000647|MED9|55090|mediator complex subunit 9##BC010906|MED9|55090|mediator complex subunit 9##BC104988|MED9|55090|mediator complex subunit 9##BC112029|MED9|55090|mediator complex subunit 9	0.999959	CTCF.p2:8:1.000
chr12	66803181	66803321	reg1006142.p1	13.152	+	TSC_hg19_v1_chr12_+_66696305 NM_033647 BC143409 BC143411 AK290894 AK024464 AB527324 AF319995	-106922	+	BC069388 AK298645 TSC_hg19_v1_chr12_+_66583064 AB590803 CU691242	-220198	+	TSC_hg19_v1_chr12_+_66583004 AF113136	-220241	+	BC115393 BC115394 TSC_hg19_v1_chr12_-_67072757 AK307576	269505	-	TSC_hg19_v1_chr12_-_67072881 AK095519 NM_001178074 NM_021150	269651	-	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	859851	+	NM_033647|HELB|92797|helicase (DNA) B##BC143409|HELB|92797|helicase (DNA) B##BC143411|HELB|92797|helicase (DNA) B##AK290894|HELB|92797|helicase (DNA) B##AF319995|HELB|92797|helicase (DNA) B##BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC115393|GRIP1|23426|glutamate receptor interacting protein 1##BC115394|GRIP1|23426|glutamate receptor interacting protein 1##AK307576|GRIP1|23426|glutamate receptor interacting protein 1##AK095519|GRIP1|23426|glutamate receptor interacting protein 1##NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1##NM_021150|GRIP1|23426|glutamate receptor interacting protein 1##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1	0.823201	CTCF.p2:10:0.823
chr5	148696873	148697009	reg1006578.p1	13.152	+	TSC_hg19_v1_chr5_+_148651443 AK095980 AK074185 BC125093 BC125094	-45479	+	TSC_hg19_v1_chr5_+_148651421 NM_001146337 NM_152406 BC040723	-45527	+	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	-175751	+	NM_152407 TSC_hg19_v1_chr5_+_148725061 BC036678 AK294005 BC070090 AL832325 AK074293 CU687032	28097	+	TSC_hg19_v1_chr5_+_148731227 AK091237 AX746868	34340	+	NM_024028 TSC_hg19_v1_chr5_+_148737608 AK075414	40649	+	AK095980|AFAP1L1|134265|actin filament associated protein 1-like 1##AK074185|AFAP1L1|134265|actin filament associated protein 1-like 1##BC125093|AFAP1L1|134265|actin filament associated protein 1-like 1##BC125094|AFAP1L1|134265|actin filament associated protein 1-like 1##NM_001146337|AFAP1L1|134265|actin filament associated protein 1-like 1##NM_152406|AFAP1L1|134265|actin filament associated protein 1-like 1##BC040723|AFAP1L1|134265|actin filament associated protein 1-like 1##NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3##NM_152407|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##BC036678|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##AK294005|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##BC070090|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##AL832325|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##AK074293|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##AK091237|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##NM_024028|PCYOX1L|78991|prenylcysteine oxidase 1 like##AK075414|PCYOX1L|78991|prenylcysteine oxidase 1 like	0.616199	CTCF.p2:-2:0.616
chr12	50708607	50708723	reg1004446.p1	13.150	+	BC136763 BC144402 BC144403 TSC_hg19_v1_chr12_-_50677266 AK000372 AK314447 AF198454 AL136911 AK222971 AB209512 BC110815 NM_001113546 NM_016357	-31370	-	AF198455 AK297766 TSC_hg19_v1_chr12_-_50616438 NM_001113547	-92209	-	AK023649 AF157325 NM_001243775	-113356	-	BC054024 AL833333 NM_001145475	81732	-	NM_001170803 NM_001170804 NM_001170808 NM_052879 NM_199188 NM_199190 TSC_hg19_v1_chr12_+_50794671 AL832198 CR936626 AL833272 BC022377 BC063479 AF370416 AK291746 AY004310 AK055521 BX647457 CU687740 EU831655 EU831738 EU831909 EU832003	86027	+	TSC_hg19_v1_chr12_+_50869532 AF131755	160922	+	BC136763|LIMA1|51474|LIM domain and actin binding 1##BC144402|LIMA1|51474|LIM domain and actin binding 1##BC144403|LIMA1|51474|LIM domain and actin binding 1##AK000372|LIMA1|51474|LIM domain and actin binding 1##AK314447|LIMA1|51474|LIM domain and actin binding 1##AF198454|LIMA1|51474|LIM domain and actin binding 1##AL136911|LIMA1|51474|LIM domain and actin binding 1##AK222971|LIMA1|51474|LIM domain and actin binding 1##AB209512|LIMA1|51474|LIM domain and actin binding 1##BC110815|LIMA1|51474|LIM domain and actin binding 1##NM_001113546|LIMA1|51474|LIM domain and actin binding 1##NM_016357|LIMA1|51474|LIM domain and actin binding 1##AF198455|LIMA1|51474|LIM domain and actin binding 1##AK297766|LIMA1|51474|LIM domain and actin binding 1##NM_001113547|LIMA1|51474|LIM domain and actin binding 1##AK023649|LIMA1|51474|LIM domain and actin binding 1##AF157325|LIMA1|51474|LIM domain and actin binding 1##NM_001243775|LIMA1|51474|LIM domain and actin binding 1##BC054024|FAM186A|121006|family with sequence similarity 186, member A##AL833333|FAM186A|121006|family with sequence similarity 186, member A##NM_001145475|FAM186A|121006|family with sequence similarity 186, member A##NM_001170803|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_001170804|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_001170808|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_052879|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_199188|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_199190|LARP4|113251|La ribonucleoprotein domain family, member 4##AL832198|LARP4|113251|La ribonucleoprotein domain family, member 4##CR936626|LARP4|113251|La ribonucleoprotein domain family, member 4##AL833272|LARP4|113251|La ribonucleoprotein domain family, member 4##BC022377|LARP4|113251|La ribonucleoprotein domain family, member 4##BC063479|LARP4|113251|La ribonucleoprotein domain family, member 4##AF370416|LARP4|113251|La ribonucleoprotein domain family, member 4##AK291746|LARP4|113251|La ribonucleoprotein domain family, member 4##AY004310|LARP4|113251|La ribonucleoprotein domain family, member 4##AK055521|LARP4|113251|La ribonucleoprotein domain family, member 4##BX647457|LARP4|113251|La ribonucleoprotein domain family, member 4##EU831655|LARP4|113251|La ribonucleoprotein domain family, member 4##EU831738|LARP4|113251|La ribonucleoprotein domain family, member 4##EU831909|LARP4|113251|La ribonucleoprotein domain family, member 4##EU832003|LARP4|113251|La ribonucleoprotein domain family, member 4##AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4	0.033875	
chr3	50653494	50653607	reg1004850.p1	13.149	+	NM_001243926 BC068497	-4235	+	TSC_hg19_v1_chr3_-_50649206 AF035947 D83532 BC031590 AF132297 AK313850 NM_013324 NM_145071	-4333	-	CU689192 AB528903 BC064354 TSC_hg19_v1_chr3_-_50649104	-4458	-	TSC_hg19_v1_chr3_+_50654561 NM_001243925 NM_004635	1011	+	TSC_hg19_v1_chr3_+_50654595 AK290969	1042	+	BC001662 BC010407 TSC_hg19_v1_chr3_+_50654611 BC007591 U09578	1077	+	NM_001243926|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC068497|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AF035947|CISH|1154|cytokine inducible SH2-containing protein##D83532|CISH|1154|cytokine inducible SH2-containing protein##BC031590|CISH|1154|cytokine inducible SH2-containing protein##AF132297|CISH|1154|cytokine inducible SH2-containing protein##AK313850|CISH|1154|cytokine inducible SH2-containing protein##NM_013324|CISH|1154|cytokine inducible SH2-containing protein##NM_145071|CISH|1154|cytokine inducible SH2-containing protein##BC064354|CISH|1154|cytokine inducible SH2-containing protein##NM_001243925|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##NM_004635|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AK290969|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC001662|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC010407|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC007591|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U09578|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3	0.589414	CTCF.p2:-10:0.589
chr19	10223795	10223927	reg1004392.p1	13.148	+	NM_002566 BC073827	-1657	+	BC171852 NM_001040664 NM_001198690 NM_020230 BC033202 TSC_hg19_v1_chr19_+_10217035 BC009833 AJ292529 CU679511 AJ300588	-6872	+	AY358276 BC142632 AB054064 NM_031917 AF230330	-10461	-	AB528489 BT006889 CR457134 CU678971 DQ890616 DQ896801 AF020833 U96074 TSC_hg19_v1_chr19_-_10230579 AK293374 AF094850 AK309944 AK316040 AK291320 BC000733 BC008469 AK316335 AK315896 AK296377 AK311624 NM_003755	6705	-	AF290894 TSC_hg19_v1_chr19_-_10291113 AB384943	67223	-	AB209413 TSC_hg19_v1_chr19_-_10305579	81696	-	NM_002566|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BC073827|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BC171852|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001040664|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001198690|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_020230|PPAN|56342|peter pan homolog (Drosophila)##BC033202|PPAN|56342|peter pan homolog (Drosophila)##BC009833|PPAN|56342|peter pan homolog (Drosophila)##AJ292529|PPAN|56342|peter pan homolog (Drosophila)##AJ300588|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##AY358276|ANGPTL6|83854|angiopoietin-like 6##BC142632|ANGPTL6|83854|angiopoietin-like 6##AB054064|ANGPTL6|83854|angiopoietin-like 6##NM_031917|ANGPTL6|83854|angiopoietin-like 6##AF230330|ANGPTL6|83854|angiopoietin-like 6##BT006889|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##CR457134|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##DQ890616|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##DQ896801|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AF020833|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##U96074|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK293374|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AF094850|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK309944|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK316040|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK291320|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##BC000733|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##BC008469|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK316335|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK315896|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK296377|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##NM_003755|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AB209413|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1	0.957098	CTCF.p2:6:0.957
chr5	149924399	149924542	reg1005412.p1	13.148	+	AK292448 NM_001543 U36600	-36757	+	TSC_hg19_v1_chr5_+_149865341 AB209107	-59031	+	TSC_hg19_v1_chr5_-_149829301 BC003401 BC001126 BC006784 BC110792 AK312179 BC091474 NM_001025070 NM_001025071 NM_005617	-95179	-	TSC_hg19_v1_chr5_+_149980641 AL831818 NM_001166208	56172	+	AK127049 NM_001166209	72735	+	TSC_hg19_v1_chr5_+_150020221 NM_001109974 NM_007286 AK290178 BC042624 BC146665 AB028952 BC152538 BC142683 AF499136 AF499137	95823	+	AK292448|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##NM_001543|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##U36600|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##BC003401|RPS14|6208|ribosomal protein S14##BC001126|RPS14|6208|ribosomal protein S14##BC006784|RPS14|6208|ribosomal protein S14##BC110792|RPS14|6208|ribosomal protein S14##AK312179|RPS14|6208|ribosomal protein S14##BC091474|RPS14|6208|ribosomal protein S14##NM_001025070|RPS14|6208|ribosomal protein S14##NM_001025071|RPS14|6208|ribosomal protein S14##NM_005617|RPS14|6208|ribosomal protein S14##AL831818|SYNPO|11346|synaptopodin##NM_001166208|SYNPO|11346|synaptopodin##AK127049|SYNPO|11346|synaptopodin##NM_001166209|SYNPO|11346|synaptopodin##NM_001109974|SYNPO|11346|synaptopodin##NM_007286|SYNPO|11346|synaptopodin##AK290178|SYNPO|11346|synaptopodin##BC042624|SYNPO|11346|synaptopodin##BC146665|SYNPO|11346|synaptopodin##AB028952|SYNPO|11346|synaptopodin##BC152538|SYNPO|11346|synaptopodin##BC142683|SYNPO|11346|synaptopodin##AF499136|SYNPO|11346|synaptopodin##AF499137|SYNPO|11346|synaptopodin	1.806739	CTCF.p2:34:0.825	CTCF.p2:-38:0.982
chr17	72364525	72364650	reg1006207.p1	13.147	+	BC143807 AB196530 AB528868 AY288421 NM_181790	-993	+	NM_001080466	-6630	-	NM_153209 TSC_hg19_v1_chr17_+_72322355 BC067749 BC026362 BC110989 AK094619 BC143327 BC093631 BC104852	-42180	+	BC110848 BC004925 BC069202 NM_022036 BC125080 BC125081	63017	+	AK075397 AF207989 AK222909 TSC_hg19_v1_chr17_+_72428254 AK000249	63668	+	AJ276102 NM_018653	65248	+	BC143807|GPR142|350383|G protein-coupled receptor 142##AB196530|GPR142|350383|G protein-coupled receptor 142##AY288421|GPR142|350383|G protein-coupled receptor 142##NM_181790|GPR142|350383|G protein-coupled receptor 142##NM_001080466|BTBD17|388419|BTB (POZ) domain containing 17##NM_153209|KIF19|124602|kinesin family member 19##BC067749|KIF19|124602|kinesin family member 19##BC026362|KIF19|124602|kinesin family member 19##BC110989|KIF19|124602|kinesin family member 19##AK094619|KIF19|124602|kinesin family member 19##BC143327|KIF19|124602|kinesin family member 19##BC093631|KIF19|124602|kinesin family member 19##BC104852|KIF19|124602|kinesin family member 19##BC110848|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC004925|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC069202|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_022036|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125080|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125081|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AJ276102|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_018653|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	0.999972	CTCF.p2:-2:1.000
chr21	36002971	36003087	reg1004400.p2	13.147	+	BT007363 CU678256 AF303449 U85266 TSC_hg19_v1_chr21_-_35987486 BC002864 AK092184 AX747397 NM_004414 AY325903	-15683	-	NM_203417 U85265	-16285	-	CR542065 AK299444 TSC_hg19_v1_chr21_-_35899121 AK293293 U85267 NM_203418	-103876	-	AF448438 AF448439 NM_053277	38658	+	S76350 GU070939 TSC_hg19_v1_chr21_-_36231874	228807	-	S76345 S76346 GU070941 TSC_hg19_v1_chr21_-_36252995	249907	-	BT007363|RCAN1|1827|regulator of calcineurin 1##AF303449|RCAN1|1827|regulator of calcineurin 1##U85266|RCAN1|1827|regulator of calcineurin 1##BC002864|RCAN1|1827|regulator of calcineurin 1##AK092184|RCAN1|1827|regulator of calcineurin 1##NM_004414|RCAN1|1827|regulator of calcineurin 1##AY325903|RCAN1|1827|regulator of calcineurin 1##NM_203417|RCAN1|1827|regulator of calcineurin 1##U85265|RCAN1|1827|regulator of calcineurin 1##CR542065|RCAN1|1827|regulator of calcineurin 1##AK299444|RCAN1|1827|regulator of calcineurin 1##AK293293|RCAN1|1827|regulator of calcineurin 1##U85267|RCAN1|1827|regulator of calcineurin 1##NM_203418|RCAN1|1827|regulator of calcineurin 1##AF448438|CLIC6|54102|chloride intracellular channel 6##AF448439|CLIC6|54102|chloride intracellular channel 6##NM_053277|CLIC6|54102|chloride intracellular channel 6##S76350|RUNX1|861|runt-related transcription factor 1##S76345|RUNX1|861|runt-related transcription factor 1##S76346|RUNX1|861|runt-related transcription factor 1	0.991057	CTCF.p2:12:0.991
chr3	123698742	123698877	reg1006990.p1	13.146	+	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	-18554	-	TSC_hg19_v1_chr3_-_123680077 AK123060 AK307847 AK294979 BC040285	-18723	-	TSC_hg19_v1_chr3_-_123603158 BC064695 NM_053025 NM_053026 NM_053027 NM_053028	-95638	-	AF303889 NM_017578	11389	-	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	114796	+	TSC_hg19_v1_chr3_+_124103674 AK131379	404814	+	AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14##AK123060|CCDC14|64770|coiled-coil domain containing 14##AK307847|CCDC14|64770|coiled-coil domain containing 14##AK294979|CCDC14|64770|coiled-coil domain containing 14##BC040285|CCDC14|64770|coiled-coil domain containing 14##BC064695|MYLK|4638|myosin light chain kinase##NM_053025|MYLK|4638|myosin light chain kinase##NM_053026|MYLK|4638|myosin light chain kinase##NM_053027|MYLK|4638|myosin light chain kinase##NM_053028|MYLK|4638|myosin light chain kinase##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AK131379|KALRN|8997|kalirin, RhoGEF kinase	0.999476	CTCF.p2:2:0.999
chr7	106788045	106788155	reg1004206.p1	13.146	+	TSC_hg19_v1_chr7_+_106685154 BC075800 M31158 NM_002736 AK128639 AK291441 AB384742 AM392728 AM392771 AM393258 AM393700 CU687290	-102897	+	TSC_hg19_v1_chr7_+_106505893 NM_002649 X83368	-282171	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	-282326	+	AK295910 NM_001244262 TSC_hg19_v1_chr7_+_106809447 AK298504 BC017069 NM_012257	21339	+	NM_005295 AK122621 AK307393	322402	+	TSC_hg19_v1_chr7_-_107204366 HQ258000 AF058718	416310	-	BC075800|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##M31158|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##NM_002736|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK128639|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK291441|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392728|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392771|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393258|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393700|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK295910|HBP1|26959|HMG-box transcription factor 1##NM_001244262|HBP1|26959|HMG-box transcription factor 1##AK298504|HBP1|26959|HMG-box transcription factor 1##BC017069|HBP1|26959|HMG-box transcription factor 1##NM_012257|HBP1|26959|HMG-box transcription factor 1##NM_005295|GPR22|2845|G protein-coupled receptor 22##AK122621|GPR22|2845|G protein-coupled receptor 22##AK307393|GPR22|2845|G protein-coupled receptor 22##HQ258000|COG5|10466|component of oligomeric golgi complex 5##AF058718|COG5|10466|component of oligomeric golgi complex 5	0.969032	CTCF.p2:-2:0.969
chr12	65950625	65950753	reg1005516.p1	13.145	+	TSC_hg19_v1_chr12_+_65672705 NM_001193461	-277965	+	NM_001031679 NM_001193460 NM_198080 TSC_hg19_v1_chr12_+_65672483 AK316365 AK293084 AK299065 AY358229 BX648776 AL833622 BC040053	-278164	+	TSC_hg19_v1_chr12_+_65563362 AK312473 NM_001167614 NM_014319 AK304317 AF112299	-387335	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	267518	+	TSC_hg19_v1_chr12_+_66218605 AK311399	267918	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	268324	+	NM_001193461|MSRB3|253827|methionine sulfoxide reductase B3##NM_001031679|MSRB3|253827|methionine sulfoxide reductase B3##NM_001193460|MSRB3|253827|methionine sulfoxide reductase B3##NM_198080|MSRB3|253827|methionine sulfoxide reductase B3##AK316365|MSRB3|253827|methionine sulfoxide reductase B3##AK293084|MSRB3|253827|methionine sulfoxide reductase B3##AK299065|MSRB3|253827|methionine sulfoxide reductase B3##AY358229|MSRB3|253827|methionine sulfoxide reductase B3##BX648776|MSRB3|253827|methionine sulfoxide reductase B3##AL833622|MSRB3|253827|methionine sulfoxide reductase B3##BC040053|MSRB3|253827|methionine sulfoxide reductase B3##AK312473|LEMD3|23592|LEM domain containing 3##NM_001167614|LEMD3|23592|LEM domain containing 3##NM_014319|LEMD3|23592|LEM domain containing 3##AK304317|LEMD3|23592|LEM domain containing 3##AF112299|LEMD3|23592|LEM domain containing 3##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2	0.940873	CTCF.p2:-7:0.941
chr7	77287213	77287340	reg1004734.p1	13.145	+	AK303602 NM_001131008 NM_001131009 AK296764	-119908	+	TSC_hg19_v1_chr7_+_77166764 NM_002835 AB209524 AK314236 AK289573 M93425 D13380 AB384966	-120470	+	TSC_hg19_v1_chr7_+_77166392 BC050008	-120898	+	TSC_hg19_v1_chr7_-_77325573 BC037783	38285	-	TSC_hg19_v1_chr7_+_77325775 NM_198467 BC059402 BC046353	38481	+	BC012192 TSC_hg19_v1_chr7_-_77427680 BC065930	140392	-	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_002835|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AB209524|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK314236|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK289573|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##M93425|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##D13380|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##BC050008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_198467|RSBN1L|222194|round spermatid basic protein 1-like##BC059402|RSBN1L|222194|round spermatid basic protein 1-like##BC046353|RSBN1L|222194|round spermatid basic protein 1-like##BC012192|TMEM60|85025|transmembrane protein 60##BC065930|TMEM60|85025|transmembrane protein 60	0.011528	
chr6	164377772	164377898	reg1005661.p1	13.144	+	AL050218 TSC_hg19_v1_chr6_+_163984651	-393222	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	-541603	+	TSC_hg19_v1_chr6_+_163835795 AF272349	-542045	+	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	1345257	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	1697861	-	AY203946 TSC_hg19_v1_chr6_-_166076051	1698217	-	AL050218|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##AY203946|LOC100132188|100132188|LP7097	0.955727	CTCF.p2:15:0.956
chr14	66962341	66962450	reg1003558.p1	13.143	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-1082670	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-1082907	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-1083069	-	AB037806 AF272663 NM_001024218 NM_020806	11729	+	TSC_hg19_v1_chr14_+_66974859 AK025169	12458	+	TSC_hg19_v1_chr14_+_66974870 AK315569	12474	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.99594	CTCF.p2:-8:0.996
chr8	128746293	128746431	reg1004782.p2	13.142	+	DQ486513 NM_001159542	-318506	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-1175638	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-1175807	-	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	1963	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	2128	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	60421	+	DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)	1.015555	CTCF.p2:-1:0.997
chr8	135898771	135898895	reg1005547.p1	13.141	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-173559	-	TSC_hg19_v1_chr8_-_135725053 AB463359	-173754	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	-190039	-	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	570825	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	571368	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	3610273	-	BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B	0.988594	CTCF.p2:4:0.989
chr10	82939704	82939818	reg1004169.p1	13.138	+	AK123978 NM_001145719	-639187	+	AK123885 NM_207372	-642104	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-725657	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	695321	+	DQ857894 NM_001165973	697681	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	2959496	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.992263	CTCF.p2:10:0.992
chr5	81937323	81937456	reg1004491.p1	13.137	+	BC093982 BC112191 NM_001017971	-336224	+	TSC_hg19_v1_chr5_-_81574219 NM_001025	-363170	-	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	-363218	-	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	435808	-	TSC_hg19_v1_chr5_-_82373255 NM_174909	435873	-	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	435994	+	BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001025|RPS23|6228|ribosomal protein S23##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##NM_174909|TMEM167A|153339|transmembrane protein 167A##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4	0.694256	CTCF.p2:-7:0.694
chr1	218344793	218344902	reg1004002.p2	13.135	+	AY963797 AK310291 AK098591 BC014608 NM_138796 TSC_hg19_v1_chr1_+_217804714 EU832110 EU832204	-540154	+	AB527654 CU687736 BC042193 TSC_hg19_v1_chr1_-_217804402 BC063474 AK001114 AK291238 NM_018040 BC027719	-540465	-	CR749497 BX647076 NM_001134285	-1033752	-	NM_016052 TSC_hg19_v1_chr1_+_218458635	113785	+	AK290066 BC003668 TSC_hg19_v1_chr1_+_218458652 BC020641 AF151873	113822	+	NM_001135599 NM_003238 TSC_hg19_v1_chr1_+_218518677 AB209842	173864	+	AY963797|SPATA17|128153|spermatogenesis associated 17##AK310291|SPATA17|128153|spermatogenesis associated 17##AK098591|SPATA17|128153|spermatogenesis associated 17##BC014608|SPATA17|128153|spermatogenesis associated 17##NM_138796|SPATA17|128153|spermatogenesis associated 17##EU832110|SPATA17|128153|spermatogenesis associated 17##EU832204|SPATA17|128153|spermatogenesis associated 17##BC042193|GPATCH2|55105|G patch domain containing 2##BC063474|GPATCH2|55105|G patch domain containing 2##AK001114|GPATCH2|55105|G patch domain containing 2##AK291238|GPATCH2|55105|G patch domain containing 2##NM_018040|GPATCH2|55105|G patch domain containing 2##BC027719|GPATCH2|55105|G patch domain containing 2##CR749497|ESRRG|2104|estrogen-related receptor gamma##BX647076|ESRRG|2104|estrogen-related receptor gamma##NM_001134285|ESRRG|2104|estrogen-related receptor gamma##NM_016052|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AK290066|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC003668|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC020641|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AF151873|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##NM_001135599|TGFB2|7042|transforming growth factor, beta 2##NM_003238|TGFB2|7042|transforming growth factor, beta 2##AB209842|TGFB2|7042|transforming growth factor, beta 2	0.958975	CTCF.p2:10:0.959
chr16	69320970	69321088	reg1004667.p2	13.135	+	TSC_hg19_v1_chr16_+_69221066 BC031058 AF243385 NM_006750 U40572 BC048215 EU831451 EU831538	-100001	+	TSC_hg19_v1_chr16_+_69166551 AK027634 AK027675 AK310104 AB075868 BC009348	-154476	+	TSC_hg19_v1_chr16_+_69166532 BX647265 AK074795	-154502	+	TSC_hg19_v1_chr16_+_69345258 AK315026 AF132747 AF159063 AF255952 NM_013245 BC047932 AF112215 CU690536 EU831747	24303	+	TSC_hg19_v1_chr16_-_69364492 AF322879 BC019912 AF239156 NM_022341	43463	-	TSC_hg19_v1_chr16_-_69373468 BC063831	52408	-	BC031058|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##AF243385|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##NM_006750|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##U40572|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##BC048215|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##EU831451|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##EU831538|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##AK027634|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK027675|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK310104|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AB075868|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##BC009348|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##BX647265|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK074795|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK315026|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF132747|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF159063|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF255952|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##NM_013245|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##BC047932|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF112215|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##EU831747|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF322879|PDF|64146|peptide deformylase (mitochondrial)##BC019912|PDF|64146|peptide deformylase (mitochondrial)##AF239156|PDF|64146|peptide deformylase (mitochondrial)##NM_022341|PDF|64146|peptide deformylase (mitochondrial)##BC063831|COG8|84342|component of oligomeric golgi complex 8	0.976132	CTCF.p2:10:0.976
chr17	70723935	70724092	reg1005103.p4	13.135	+	AK000477 TSC_hg19_v1_chr17_-_70588944	-135070	-	TSC_hg19_v1_chr17_+_70117187 BC007951	-606773	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-606843	+	AF331643 TSC_hg19_v1_chr17_-_71088816	364803	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	364810	-	BC035631 TSC_hg19_v1_chr17_-_71088831	364818	-	AK000477|LOC100499467|100499467|uncharacterized LOC100499467##BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.99661	CTCF.p2:-7:0.997
chr3	189666349	189666485	reg1004474.p1	13.133	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	-158899	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-317158	+	AK125682 NM_198485 BC101550 BC101552	-776606	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	172278	-	NM_018192	172490	-	NM_001134418	173808	-	AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##NM_001134418|LEPREL1|55214|leprecan-like 1	0.952458	CTCF.p2:19:0.952
chr9	133336703	133336816	reg1003981.p1	13.132	+	TSC_hg19_v1_chr9_+_133320348 BC009243 AK304625 AK293114 AK315093 AK027126 BC021676 BC013224	-16457	+	NM_000050 NM_054012	-16666	+	NM_001128826	-373888	+	TSC_hg19_v1_chr9_-_133454851 AK056037	118090	-	TSC_hg19_v1_chr9_+_133454974 AK295155 NM_003934 BC137338 BC137340	118203	+	TSC_hg19_v1_chr9_+_133454991 U69127	118237	+	BC009243|ASS1|445|argininosuccinate synthase 1##AK304625|ASS1|445|argininosuccinate synthase 1##AK293114|ASS1|445|argininosuccinate synthase 1##AK315093|ASS1|445|argininosuccinate synthase 1##AK027126|ASS1|445|argininosuccinate synthase 1##BC021676|ASS1|445|argininosuccinate synthase 1##BC013224|ASS1|445|argininosuccinate synthase 1##NM_000050|ASS1|445|argininosuccinate synthase 1##NM_054012|ASS1|445|argininosuccinate synthase 1##NM_001128826|NCS1|23413|neuronal calcium sensor 1##AK056037|LOC100272217|100272217|uncharacterized LOC100272217##AK295155|FUBP3|8939|far upstream element (FUSE) binding protein 3##NM_003934|FUBP3|8939|far upstream element (FUSE) binding protein 3##BC137338|FUBP3|8939|far upstream element (FUSE) binding protein 3##BC137340|FUBP3|8939|far upstream element (FUSE) binding protein 3##U69127|FUBP3|8939|far upstream element (FUSE) binding protein 3	0.999962	CTCF.p2:-25:1.000
chr19	4204701	4204827	reg1005073.p2	13.131	+	NM_133475	-21414	+	TSC_hg19_v1_chr19_-_4182561 DQ896358 EU176413 AB528632 CR457200 CU678868 BC005026 BC000090 BC004218 AK299420 BC028220 AK293348 AK315048 AK301247 AK074810 AK225567 AF233396 NM_001193285 NM_016539	-22219	-	TSC_hg19_v1_chr19_+_4153636 AK313099 AB050902 AK172839 NM_032607 AB073612 BC101504 BC143609 BC143610 BC101508 EU446882	-51097	+	BC015364 L08187 NM_005755 BC046112 AB528398 DQ891589 EU176581 CU677281	24756	+	TSC_hg19_v1_chr19_+_4247086 AK001236 BC000561 AK023988 NM_018074 AF091080	42326	+	AK056268 NM_020209	73833	+	NM_133475|ANKRD24|170961|ankyrin repeat domain 24##DQ896358|SIRT6|51548|sirtuin 6##EU176413|SIRT6|51548|sirtuin 6##CR457200|SIRT6|51548|sirtuin 6##BC005026|SIRT6|51548|sirtuin 6##BC004218|SIRT6|51548|sirtuin 6##AK299420|SIRT6|51548|sirtuin 6##BC028220|SIRT6|51548|sirtuin 6##AK293348|SIRT6|51548|sirtuin 6##AK315048|SIRT6|51548|sirtuin 6##AK301247|SIRT6|51548|sirtuin 6##AK074810|SIRT6|51548|sirtuin 6##AK225567|SIRT6|51548|sirtuin 6##AF233396|SIRT6|51548|sirtuin 6##NM_001193285|SIRT6|51548|sirtuin 6##NM_016539|SIRT6|51548|sirtuin 6##AK313099|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB050902|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AK172839|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##NM_032607|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB073612|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101504|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143609|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143610|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101508|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##EU446882|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC015364|EBI3|10148|Epstein-Barr virus induced 3##L08187|EBI3|10148|Epstein-Barr virus induced 3##NM_005755|EBI3|10148|Epstein-Barr virus induced 3##BC046112|EBI3|10148|Epstein-Barr virus induced 3##DQ891589|EBI3|10148|Epstein-Barr virus induced 3##EU176581|EBI3|10148|Epstein-Barr virus induced 3##AK001236|CCDC94|55702|coiled-coil domain containing 94##BC000561|CCDC94|55702|coiled-coil domain containing 94##AK023988|CCDC94|55702|coiled-coil domain containing 94##NM_018074|CCDC94|55702|coiled-coil domain containing 94##AF091080|CCDC94|55702|coiled-coil domain containing 94##AK056268|SHD|56961|Src homology 2 domain containing transforming protein D##NM_020209|SHD|56961|Src homology 2 domain containing transforming protein D	0.999608	CTCF.p2:17:1.000
chr2	26968718	26968833	reg1004724.p1	13.131	+	TSC_hg19_v1_chr2_+_26915710 BC140701 NM_002246 AF006823 AF065163	-53132	+	BC140923 NM_001029881 BC127685 BC127684	-104553	-	TSC_hg19_v1_chr2_+_26785463 NM_001105519	-183307	+	TSC_hg19_v1_chr2_+_26987155 AK000562 NM_017877 BC028081 BC035519 BX647807 AK075164 AK296996 BC011013 AK299598 AY358820 AK222929 BX648017 CU688388 CR457243	18394	+	NM_001809 NM_001042426 TSC_hg19_v1_chr2_+_27008894	40117	+	TSC_hg19_v1_chr2_+_27008924 U14518 BC000881 BC002703 CU674442 BT007246	40213	+	BC140701|KCNK3|3777|potassium channel, subfamily K, member 3##NM_002246|KCNK3|3777|potassium channel, subfamily K, member 3##AF006823|KCNK3|3777|potassium channel, subfamily K, member 3##AF065163|KCNK3|3777|potassium channel, subfamily K, member 3##BC140923|CIB4|130106|calcium and integrin binding family member 4##NM_001029881|CIB4|130106|calcium and integrin binding family member 4##BC127685|CIB4|130106|calcium and integrin binding family member 4##BC127684|CIB4|130106|calcium and integrin binding family member 4##NM_001105519|C2orf70|339778|chromosome 2 open reading frame 70##AK000562|C2orf18|54978|chromosome 2 open reading frame 18##NM_017877|C2orf18|54978|chromosome 2 open reading frame 18##BC028081|C2orf18|54978|chromosome 2 open reading frame 18##BC035519|C2orf18|54978|chromosome 2 open reading frame 18##BX647807|C2orf18|54978|chromosome 2 open reading frame 18##AK075164|C2orf18|54978|chromosome 2 open reading frame 18##AK296996|C2orf18|54978|chromosome 2 open reading frame 18##BC011013|CENPA|1058|centromere protein A##AK299598|C2orf18|54978|chromosome 2 open reading frame 18##AY358820|C2orf18|54978|chromosome 2 open reading frame 18##AK222929|C2orf18|54978|chromosome 2 open reading frame 18##BX648017|C2orf18|54978|chromosome 2 open reading frame 18##CR457243|C2orf18|54978|chromosome 2 open reading frame 18##NM_001809|CENPA|1058|centromere protein A##NM_001042426|CENPA|1058|centromere protein A##U14518|CENPA|1058|centromere protein A##BC000881|CENPA|1058|centromere protein A##BC002703|CENPA|1058|centromere protein A##BT007246|CENPA|1058|centromere protein A	0.9995	CTCF.p2:13:1.000
chr20	32450548	32450681	reg1001175.p1	13.129	+	TSC_hg19_v1_chr20_+_32399155 AB100261 BC033859 AY726594 AY329085	-51394	+	TSC_hg19_v1_chr20_+_32399127 NM_176812	-51528	+	BC132873 BC144188 BC157823 BC146811 BC094738 NM_032819 BC063492 BC040440 AB587355 HQ258664	-130818	+	TSC_hg19_v1_chr20_+_32581531 NM_007367 NM_016732	130865	+	TSC_hg19_v1_chr20_+_32581567 AK226085	130973	+	TSC_hg19_v1_chr20_+_32581716 BC103753 AK299766	131090	+	AB100261|CHMP4B|128866|charged multivesicular body protein 4B##BC033859|CHMP4B|128866|charged multivesicular body protein 4B##AY726594|CHMP4B|128866|charged multivesicular body protein 4B##AY329085|CHMP4B|128866|charged multivesicular body protein 4B##NM_176812|CHMP4B|128866|charged multivesicular body protein 4B##BC132873|ZNF341|84905|zinc finger protein 341##BC144188|ZNF341|84905|zinc finger protein 341##BC157823|ZNF341|84905|zinc finger protein 341##BC146811|ZNF341|84905|zinc finger protein 341##BC094738|ZNF341|84905|zinc finger protein 341##NM_032819|ZNF341|84905|zinc finger protein 341##BC063492|ZNF341|84905|zinc finger protein 341##BC040440|ZNF341|84905|zinc finger protein 341##HQ258664|ZNF341|84905|zinc finger protein 341##NM_007367|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##NM_016732|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK226085|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC103753|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK299766|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))	0.996305	CTCF.p2:0:0.996
chr5	130207319	130207449	reg1005672.p1	13.129	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	-966897	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-1411331	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-1776959	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	293547	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	293606	-	TSC_hg19_v1_chr5_-_130501019 NM_005340	293659	-	BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1##NM_005340|HINT1|3094|histidine triad nucleotide binding protein 1	0.490934	CTCF.p2:0:0.491
chr17	76172735	76172868	reg1006206.p1	13.128	+	TSC_hg19_v1_chr17_+_76164661 AJ002308 AY358916 NM_004710 BC000407 BC105992 BC029755 DQ891832 DQ895019	-8141	+	AY358510 NM_001163075	-30368	+	BC023597 NM_007267 TSC_hg19_v1_chr17_-_76128499	-44301	-	AB451268 AB451395 BT006941 AB591021 BC007872 BC007986 BC006484 AK314950 K02581 TSC_hg19_v1_chr17_-_76183133 NM_003258	10378	-	BC132824 NM_001010982 NM_001145526 TSC_hg19_v1_chr17_+_76183442 BC020920 BC142973 BX647783 BX648442 EU832465 EU832546 HQ258157	10622	+	NM_001012270 NM_001012271 NM_001168 TSC_hg19_v1_chr17_+_76210320 AK301793	37498	+	AJ002308|SYNGR2|9144|synaptogyrin 2##AY358916|SYNGR2|9144|synaptogyrin 2##NM_004710|SYNGR2|9144|synaptogyrin 2##BC000407|SYNGR2|9144|synaptogyrin 2##BC105992|SYNGR2|9144|synaptogyrin 2##BC029755|SYNGR2|9144|synaptogyrin 2##DQ891832|SYNGR2|9144|synaptogyrin 2##DQ895019|SYNGR2|9144|synaptogyrin 2##AY358510|C17orf99|100141515|chromosome 17 open reading frame 99##NM_001163075|C17orf99|100141515|chromosome 17 open reading frame 99##BC023597|TMC6|11322|transmembrane channel-like 6##NM_007267|TMC6|11322|transmembrane channel-like 6##AB451268|TK1|7083|thymidine kinase 1, soluble##AB451395|TK1|7083|thymidine kinase 1, soluble##BT006941|TK1|7083|thymidine kinase 1, soluble##BC007872|TK1|7083|thymidine kinase 1, soluble##BC007986|TK1|7083|thymidine kinase 1, soluble##BC006484|TK1|7083|thymidine kinase 1, soluble##AK314950|TK1|7083|thymidine kinase 1, soluble##K02581|TK1|7083|thymidine kinase 1, soluble##NM_003258|TK1|7083|thymidine kinase 1, soluble##BC132824|AFMID|125061|arylformamidase##NM_001010982|AFMID|125061|arylformamidase##NM_001145526|AFMID|125061|arylformamidase##BC020920|AFMID|125061|arylformamidase##BC142973|AFMID|125061|arylformamidase##BX648442|AFMID|125061|arylformamidase##EU832465|AFMID|125061|arylformamidase##EU832546|AFMID|125061|arylformamidase##HQ258157|AFMID|125061|arylformamidase##NM_001012270|BIRC5|332|baculoviral IAP repeat containing 5##NM_001012271|BIRC5|332|baculoviral IAP repeat containing 5##NM_001168|BIRC5|332|baculoviral IAP repeat containing 5##AK301793|BIRC5|332|baculoviral IAP repeat containing 5	0.79281	CTCF.p2:11:0.793
chr3	120280206	120280337	reg1005911.p1	13.128	+	TSC_hg19_v1_chr3_-_120169846 AB527652 D89937 BC000055 U06863 AK300356 AK289388 AK291138 AK311050 AK300436 BX647421 AK312261 NM_007085	-110434	-	TSC_hg19_v1_chr3_-_120068162 AB528173 AM393236 BC013757 NM_001099678	-212130	-	NM_001168271 NM_153002	-317130	-	NM_001168331 NM_004547 BC000855 BC146885 BC146887 BC146927 BC146932 TSC_hg19_v1_chr3_+_120315168	34876	+	TSC_hg19_v1_chr3_+_120315182 BC070285 AF044957 DQ891096 DQ894273 DQ894278 BC034579	34921	+	CU687162 EU831603 EU831690 TSC_hg19_v1_chr3_-_120401087 BC071757 Z75048 U63008 AK290782 BC020792 AF045167	120772	-	BC000055|FSTL1|11167|follistatin-like 1##U06863|FSTL1|11167|follistatin-like 1##AK300356|FSTL1|11167|follistatin-like 1##AK289388|FSTL1|11167|follistatin-like 1##AK291138|FSTL1|11167|follistatin-like 1##AK311050|FSTL1|11167|follistatin-like 1##AK300436|FSTL1|11167|follistatin-like 1##BX647421|FSTL1|11167|follistatin-like 1##AK312261|FSTL1|11167|follistatin-like 1##NM_007085|FSTL1|11167|follistatin-like 1##AM393236|LRRC58|116064|leucine rich repeat containing 58##BC013757|LRRC58|116064|leucine rich repeat containing 58##NM_001099678|LRRC58|116064|leucine rich repeat containing 58##NM_001168271|GPR156|165829|G protein-coupled receptor 156##NM_153002|GPR156|165829|G protein-coupled receptor 156##NM_001168331|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##NM_004547|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC000855|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146885|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146887|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146927|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146932|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC070285|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##AF044957|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ891096|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ894273|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ894278|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC034579|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##EU831603|HGD|3081|homogentisate 1,2-dioxygenase##EU831690|HGD|3081|homogentisate 1,2-dioxygenase##BC071757|HGD|3081|homogentisate 1,2-dioxygenase##Z75048|HGD|3081|homogentisate 1,2-dioxygenase##U63008|HGD|3081|homogentisate 1,2-dioxygenase##AK290782|HGD|3081|homogentisate 1,2-dioxygenase##BC020792|HGD|3081|homogentisate 1,2-dioxygenase##AF045167|HGD|3081|homogentisate 1,2-dioxygenase	0.999227	CTCF.p2:-5:0.999
chr22	22936642	22936762	reg1004076.p1	13.127	+	BC014074 NM_206955 NM_206956 AK304593 TSC_hg19_v1_chr22_-_22901678 BC039731 U65011 NM_006115 NM_206953 NM_206954 BC022008	-35108	-	BC053901 AK093108 NM_080740	-62098	-	AK097608 NM_080764	-73198	-	NM_199127 X98922 CU686896 BC069534	52096	+	TSC_hg19_v1_chr22_+_23010757 L29162	74058	+	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	92501	+	BC014074|PRAME|23532|preferentially expressed antigen in melanoma##NM_206955|PRAME|23532|preferentially expressed antigen in melanoma##NM_206956|PRAME|23532|preferentially expressed antigen in melanoma##AK304593|PRAME|23532|preferentially expressed antigen in melanoma##BC039731|PRAME|23532|preferentially expressed antigen in melanoma##U65011|PRAME|23532|preferentially expressed antigen in melanoma##NM_006115|PRAME|23532|preferentially expressed antigen in melanoma##NM_206953|PRAME|23532|preferentially expressed antigen in melanoma##NM_206954|PRAME|23532|preferentially expressed antigen in melanoma##BC022008|PRAME|23532|preferentially expressed antigen in melanoma##BC053901|ZNF280A|129025|zinc finger protein 280A##AK093108|ZNF280A|129025|zinc finger protein 280A##NM_080740|ZNF280A|129025|zinc finger protein 280A##AK097608|ZNF280B|140883|zinc finger protein 280B##NM_080764|ZNF280B|140883|zinc finger protein 280B##NM_199127|GGTLC2|91227|gamma-glutamyltransferase light chain 2##X98922|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC069534|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25	0.988619	CTCF.p2:-24:0.989
chr11	66050052	66050187	reg1005978.p1	13.126	+	TSC_hg19_v1_chr11_+_66045696 BC047953 NM_182553	-4443	+	AL136635 BC028331 TSC_hg19_v1_chr11_+_66036109 BC071169 AF092437 AB464119 AM393195 CU687104 AJ245875 CR533462	-13992	+	TSC_hg19_v1_chr11_+_66036087 NM_030981 AK292086 AK315333	-14055	+	CR456710 TSC_hg19_v1_chr11_-_66056606 AK311173 AK310521 AF004876 BC001299	6411	-	AK308988 TSC_hg19_v1_chr11_-_66056607 AK226003 AK291124 NM_020470	6505	-	TSC_hg19_v1_chr11_+_66059337 BC033898	9219	+	BC047953|CNIH2|254263|cornichon homolog 2 (Drosophila)##NM_182553|CNIH2|254263|cornichon homolog 2 (Drosophila)##AL136635|RAB1B|81876|RAB1B, member RAS oncogene family##BC028331|RAB1B|81876|RAB1B, member RAS oncogene family##BC071169|RAB1B|81876|RAB1B, member RAS oncogene family##AF092437|RAB1B|81876|RAB1B, member RAS oncogene family##AM393195|RAB1B|81876|RAB1B, member RAS oncogene family##AJ245875|RAB1B|81876|RAB1B, member RAS oncogene family##CR533462|RAB1B|81876|RAB1B, member RAS oncogene family##NM_030981|RAB1B|81876|RAB1B, member RAS oncogene family##AK292086|RAB1B|81876|RAB1B, member RAS oncogene family##AK315333|RAB1B|81876|RAB1B, member RAS oncogene family##CR456710|YIF1A|10897|Yip1 interacting factor homolog A (S. cerevisiae)##AK310521|YIF1A|10897|Yip1 interacting factor homolog A (S. cerevisiae)##AF004876|YIF1A|10897|Yip1 interacting factor homolog A (S. cerevisiae)##BC001299|YIF1A|10897|Yip1 interacting factor homolog A (S. cerevisiae)##AK308988|YIF1A|10897|Yip1 interacting factor homolog A (S. cerevisiae)##AK226003|YIF1A|10897|Yip1 interacting factor homolog A (S. cerevisiae)##AK291124|YIF1A|10897|Yip1 interacting factor homolog A (S. cerevisiae)##NM_020470|YIF1A|10897|Yip1 interacting factor homolog A (S. cerevisiae)##BC033898|TMEM151A|256472|transmembrane protein 151A	0.999535	CTCF.p2:0:1.000
chr20	30679801	30679912	reg1005337.p1	13.126	+	TSC_hg19_v1_chr20_+_30640055 NM_001172129 NM_001172130 NM_001172131 NM_001172132 NM_001172133 NM_002110 AK289896 AK225819 AK290928 AK298726 AK026432 BC108930 BC108931 BC113854 BC114463 AK314335 BC073748 BC094847 BC014435	-39810	+	NM_080625 AK057090 BC030254	-81608	+	AY534245 NM_001011718 TSC_hg19_v1_chr20_+_30555960	-123967	+	TSC_hg19_v1_chr20_+_30697308 NM_014742	17513	+	TSC_hg19_v1_chr20_+_30697532 AK126534 AK294980 AK296500 AK302439 BC021107 D87444	17685	+	TSC_hg19_v1_chr20_-_30795547 AK292450 BC000197 D83784 AF006005 BC023655 NM_002657	115619	-	NM_001172129|HCK|3055|hemopoietic cell kinase##NM_001172130|HCK|3055|hemopoietic cell kinase##NM_001172131|HCK|3055|hemopoietic cell kinase##NM_001172132|HCK|3055|hemopoietic cell kinase##NM_001172133|HCK|3055|hemopoietic cell kinase##NM_002110|HCK|3055|hemopoietic cell kinase##AK289896|HCK|3055|hemopoietic cell kinase##AK225819|HCK|3055|hemopoietic cell kinase##AK290928|HCK|3055|hemopoietic cell kinase##AK298726|HCK|3055|hemopoietic cell kinase##AK026432|HCK|3055|hemopoietic cell kinase##BC108930|HCK|3055|hemopoietic cell kinase##BC108931|HCK|3055|hemopoietic cell kinase##BC113854|HCK|3055|hemopoietic cell kinase##BC114463|HCK|3055|hemopoietic cell kinase##AK314335|HCK|3055|hemopoietic cell kinase##BC073748|HCK|3055|hemopoietic cell kinase##BC094847|HCK|3055|hemopoietic cell kinase##BC014435|HCK|3055|hemopoietic cell kinase##NM_080625|C20orf160|140706|chromosome 20 open reading frame 160##AK057090|C20orf160|140706|chromosome 20 open reading frame 160##BC030254|C20orf160|140706|chromosome 20 open reading frame 160##AY534245|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_001011718|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4##BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4##D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK292450|PLAGL2|5326|pleiomorphic adenoma gene-like 2##D83784|PLAGL2|5326|pleiomorphic adenoma gene-like 2##AF006005|PLAGL2|5326|pleiomorphic adenoma gene-like 2##BC023655|PLAGL2|5326|pleiomorphic adenoma gene-like 2##NM_002657|PLAGL2|5326|pleiomorphic adenoma gene-like 2	0.998193	CTCF.p2:0:0.998
chr5	65603626	65603762	reg1006447.p1	13.126	+	BC067770 NM_139168	-163032	+	TSC_hg19_v1_chr5_+_65440162 AK308287 BC017000 AK091758 AX747166 BC047322	-163525	+	TSC_hg19_v1_chr5_+_65440053 NM_001077199	-163634	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	288514	+	AY830839 BC018692 NM_015183	520909	+	BC109069 BC109070 D83597 NM_005582 AK313177	888906	-	BC067770|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_139168|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK308287|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC017000|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK091758|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC047322|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_001077199|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule	0.970714	CTCF.p2:-16:0.971
chr6	17804542	17804658	reg1005086.p1	13.126	+	Z25535 AB384675 AK295644 BC052965 NM_005124 TSC_hg19_v1_chr6_-_17707139 AB210024	-97698	-	TSC_hg19_v1_chr6_+_17600620 NM_016255 AK296393 AK312814 AF097027 BC047881	-204001	+	AK312362 NM_006366 TSC_hg19_v1_chr6_+_17393918 AL832154 AK295600 AK294215 AK293134 AK297538 AK308461 BC008481	-410818	+	AJ291578 AJ291579 BC127115 BC127116 AY014403 AY014404 TSC_hg19_v1_chr6_-_17987786	183160	-	TSC_hg19_v1_chr6_-_17987867 BC062673 NM_001105566 NM_001105567 NM_001105568 NM_001243423 NM_022113	183266	-	AY324850 BC103888 BC103889 BC103890 NM_198586	318250	-	Z25535|NUP153|9972|nucleoporin 153kDa##AK295644|NUP153|9972|nucleoporin 153kDa##BC052965|NUP153|9972|nucleoporin 153kDa##NM_005124|NUP153|9972|nucleoporin 153kDa##AB210024|NUP153|9972|nucleoporin 153kDa##NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1##AK296393|FAM8A1|51439|family with sequence similarity 8, member A1##AK312814|FAM8A1|51439|family with sequence similarity 8, member A1##AF097027|FAM8A1|51439|family with sequence similarity 8, member A1##BC047881|FAM8A1|51439|family with sequence similarity 8, member A1##AK312362|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##NM_006366|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AL832154|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK295600|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK294215|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK293134|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK297538|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK308461|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##BC008481|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AJ291578|KIF13A|63971|kinesin family member 13A##AJ291579|KIF13A|63971|kinesin family member 13A##BC127115|KIF13A|63971|kinesin family member 13A##BC127116|KIF13A|63971|kinesin family member 13A##AY014403|KIF13A|63971|kinesin family member 13A##AY014404|KIF13A|63971|kinesin family member 13A##BC062673|KIF13A|63971|kinesin family member 13A##NM_001105566|KIF13A|63971|kinesin family member 13A##NM_001105567|KIF13A|63971|kinesin family member 13A##NM_001105568|KIF13A|63971|kinesin family member 13A##NM_001243423|KIF13A|63971|kinesin family member 13A##NM_022113|KIF13A|63971|kinesin family member 13A##AY324850|NHLRC1|378884|NHL repeat containing 1##BC103888|NHLRC1|378884|NHL repeat containing 1##BC103889|NHLRC1|378884|NHL repeat containing 1##BC103890|NHLRC1|378884|NHL repeat containing 1##NM_198586|NHLRC1|378884|NHL repeat containing 1	0.996044	CTCF.p2:-1:0.996
chr9	130706097	130706224	reg1004586.p4	13.126	+	BC015233 NM_003863	-5398	-	TSC_hg19_v1_chr9_-_130700134 AF061729 BC107863 AB013361 AK312121	-6017	-	TSC_hg19_v1_chr9_-_130700118 BC015374	-6053	-	BC137087 BC137088 BC047949 NM_203305 BC142952	6771	-	TSC_hg19_v1_chr9_-_130742813 AK058004 NM_001035254	36649	-	AK122729 NM_197956	123438	-	BC015233|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##NM_003863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AF061729|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##BC107863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AB013361|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK312121|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##BC015374|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##BC137087|FAM102A|399665|family with sequence similarity 102, member A##BC137088|FAM102A|399665|family with sequence similarity 102, member A##BC047949|FAM102A|399665|family with sequence similarity 102, member A##NM_203305|FAM102A|399665|family with sequence similarity 102, member A##BC142952|FAM102A|399665|family with sequence similarity 102, member A##AK058004|FAM102A|399665|family with sequence similarity 102, member A##NM_001035254|FAM102A|399665|family with sequence similarity 102, member A##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1	0.8371	CTCF.p2:-5:0.837
chr10	49497803	49497916	reg1004107.p1	13.125	+	CR749241 NM_001018071	-14933	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	-290038	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-669917	-	TSC_hg19_v1_chr10_+_49514722 AK292523	16927	+	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	111813	+	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	315228	-	CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AK292523|MAPK8|5599|mitogen-activated protein kinase 8##BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22	0.148039	
chr15	84107567	84107702	reg1006840.p1	13.125	+	L03427 NM_001717 TSC_hg19_v1_chr15_-_83953480	-154156	-	TSC_hg19_v1_chr15_-_83952207 AK302992	-155432	-	BC040554 TSC_hg19_v1_chr15_-_83876823	-230838	-	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	8426	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	8594	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	215193	+	L03427|BNC1|646|basonuclin 1##NM_001717|BNC1|646|basonuclin 1##AK302992|BNC1|646|basonuclin 1##BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3	0.998594	CTCF.p2:-9:0.999
chr7	135800140	135800252	reg1005022.p2	13.124	+	BC013989 TSC_hg19_v1_chr7_-_135662202 NM_001128619 NM_145808	-137994	-	TSC_hg19_v1_chr7_-_135662107 AF106075 AL834231 BC028093 AK309816 AK056225	-138106	-	AB489167 AM393216 AM393266 TSC_hg19_v1_chr7_-_135661945	-138300	-	AY034603 AY219704 NM_001006627 NM_001006630 AK290236 AL832585	753210	+	AK125233 AY034604 AY456125 AY456126 AY456127 NM_000739 NM_001006631 NM_001006632 AY219705 NM_001006626 AY219703 NM_001006629 AY034605 NM_001006628 TSC_hg19_v1_chr7_+_136554002	753721	+	TSC_hg19_v1_chr7_-_137028305 D90226	1228107	-	NM_001128619|LUZP6|767558|leucine zipper protein 6##NM_145808|MTPN|136319|myotrophin##AF106075|MTPN|136319|myotrophin##AL834231|MTPN|136319|myotrophin##BC028093|MTPN|136319|myotrophin##AK309816|MTPN|136319|myotrophin##AK056225|MTPN|136319|myotrophin##AM393216|MTPN|136319|myotrophin##AM393266|MTPN|136319|myotrophin##AY034603|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219704|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006627|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006630|CHRM2|1129|cholinergic receptor, muscarinic 2##AK290236|CHRM2|1129|cholinergic receptor, muscarinic 2##AL832585|CHRM2|1129|cholinergic receptor, muscarinic 2##AK125233|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034604|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456125|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456126|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456127|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_000739|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006631|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006632|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219705|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006626|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219703|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006629|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034605|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006628|CHRM2|1129|cholinergic receptor, muscarinic 2##D90226|PTN|5764|pleiotrophin	0.99468	CTCF.p2:-6:0.995
chrUn_gl000227	114987	115168	reg1005435.p1	13.124	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.614855	CTCF.p2:13:0.373	CTCF.p2:-104:0.242
chr1	156553955	156554070	reg1004646.p1	13.123	+	NM_001105669	-4494	+	AY253300 TSC_hg19_v1_chr1_-_156542352 AB105103 BC131536 BC033549 NM_178229	-11650	-	AK310187 TSC_hg19_v1_chr1_-_156470568	-83444	-	TSC_hg19_v1_chr1_+_156561567 AK294835 AK298222 BC056917 NM_144772 AJ315849 BC100931 BC100932 BC100933 BC100934	7543	+	TSC_hg19_v1_chr1_+_156561594 AK316083	7590	+	AB528795 BC032436 TSC_hg19_v1_chr1_-_156571275 BC040147 AK125763 BC056904 AK000256 AK293026 AK301232 NM_015590 NM_182679	17245	-	NM_001105669|TTC24|164118|tetratricopeptide repeat domain 24##AY253300|IQGAP3|128239|IQ motif containing GTPase activating protein 3##AB105103|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC131536|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC033549|IQGAP3|128239|IQ motif containing GTPase activating protein 3##NM_178229|IQGAP3|128239|IQ motif containing GTPase activating protein 3##AK310187|MEF2D|4209|myocyte enhancer factor 2D##AK294835|APOA1BP|128240|apolipoprotein A-I binding protein##AK298222|APOA1BP|128240|apolipoprotein A-I binding protein##BC056917|APOA1BP|128240|apolipoprotein A-I binding protein##NM_144772|APOA1BP|128240|apolipoprotein A-I binding protein##AJ315849|APOA1BP|128240|apolipoprotein A-I binding protein##BC100931|APOA1BP|128240|apolipoprotein A-I binding protein##BC100932|APOA1BP|128240|apolipoprotein A-I binding protein##BC100933|APOA1BP|128240|apolipoprotein A-I binding protein##BC100934|APOA1BP|128240|apolipoprotein A-I binding protein##BC032436|GPATCH4|54865|G patch domain containing 4##BC040147|GPATCH4|54865|G patch domain containing 4##AK125763|GPATCH4|54865|G patch domain containing 4##BC056904|GPATCH4|54865|G patch domain containing 4##AK000256|GPATCH4|54865|G patch domain containing 4##AK293026|GPATCH4|54865|G patch domain containing 4##AK301232|GPATCH4|54865|G patch domain containing 4##NM_015590|GPATCH4|54865|G patch domain containing 4##NM_182679|GPATCH4|54865|G patch domain containing 4	0.289059	CTCF.p2:-4:0.289
chr1	94801514	94801677	reg1004829.p2	13.123	+	TSC_hg19_v1_chr1_-_94703252 BC067839 NM_004815	-98316	-	TSC_hg19_v1_chr1_-_94703141 BC093767 U90920 AK307733 BC022483	-98531	-	AF001945 U88667 AK295818 AF000148 AB210040 DQ426859 NM_000350	-214904	-	TSC_hg19_v1_chr1_+_94883966 NM_001122674 NM_002858	82353	+	AK296791 TSC_hg19_v1_chr1_+_94883971 AK302714 AK308159 BC068509 BC009712 X58528 AB529219 CU679455 BT006644 M81182	82406	+	AF497569 AF497570 BT019808 CR541792 AB528376 AF487337 DQ892755 M16553 TSC_hg19_v1_chr1_-_95007316 M27436 J02931 AK312638 AK310918 AY940729 BC011029 NM_001178096 NM_001993	205680	-	BC067839|ARHGAP29|9411|Rho GTPase activating protein 29##NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29##BC093767|ARHGAP29|9411|Rho GTPase activating protein 29##U90920|ARHGAP29|9411|Rho GTPase activating protein 29##AK307733|ARHGAP29|9411|Rho GTPase activating protein 29##BC022483|ARHGAP29|9411|Rho GTPase activating protein 29##AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##NM_001122674|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_002858|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK296791|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK302714|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK308159|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC068509|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC009712|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##X58528|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BT006644|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##M81182|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AF497569|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF497570|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BT019808|F3|2152|coagulation factor III (thromboplastin, tissue factor)##CR541792|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF487337|F3|2152|coagulation factor III (thromboplastin, tissue factor)##DQ892755|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M16553|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M27436|F3|2152|coagulation factor III (thromboplastin, tissue factor)##J02931|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK312638|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK310918|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AY940729|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BC011029|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001178096|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001993|F3|2152|coagulation factor III (thromboplastin, tissue factor)	1.297931	CTCF.p2:37:0.480	CTCF.p2:-47:0.818
chr2	85092394	85092531	reg1006359.p1	13.123	+	TSC_hg19_v1_chr2_+_84743576 AK094676 NM_001370	-348885	+	NM_003849	-405877	-	AK296741 TSC_hg19_v1_chr2_-_84686396	-406067	-	TSC_hg19_v1_chr2_-_85108209 AK296608 AK309615	15745	-	TSC_hg19_v1_chr2_-_85108241 NM_001080824 BC051789	15841	-	NM_021103 AK130949 D28363 TSC_hg19_v1_chr2_+_85132779 AK311952 BC016731 BC107889 S54005 BC016025 M20259 AY453400	40333	+	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296608|C2orf89|129293|chromosome 2 open reading frame 89##AK309615|C2orf89|129293|chromosome 2 open reading frame 89##NM_001080824|C2orf89|129293|chromosome 2 open reading frame 89##BC051789|C2orf89|129293|chromosome 2 open reading frame 89##NM_021103|TMSB10|9168|thymosin beta 10##AK130949|TMSB10|9168|thymosin beta 10##AK311952|TMSB10|9168|thymosin beta 10##BC016731|TMSB10|9168|thymosin beta 10##BC107889|TMSB10|9168|thymosin beta 10##S54005|TMSB10|9168|thymosin beta 10##BC016025|TMSB10|9168|thymosin beta 10##M20259|TMSB10|9168|thymosin beta 10##AY453400|TMSB10|9168|thymosin beta 10	0.987329	CTCF.p2:11:0.987
chr11	15962833	15962956	reg1005439.p1	13.122	+	AB236158 NM_001042536	-826411	+	AB236159 NM_001031853	-828925	+	BC008428 AK291188 BC092468 NM_000728	-867768	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	461507	-	BC037866 NM_001145811	467533	-	AF309034 NM_033326	535031	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	0.944518	CTCF.p2:0:0.945
chr12	9901404	9901529	reg1006180.p1	13.122	+	AF518873 BC093857 BC093859 NM_001253748 NM_001253750 NM_172004	-15590	-	BC063128 NM_001197318 NM_013269 AK310150 NM_001004419 AK310554 AK313554 BC019883 AF133299 AF285087 CU676474 FN813349 FN813350 FN813351 NM_001197317 NM_001197319	-79199	+	TSC_hg19_v1_chr12_+_9800760 AK096274	-100570	+	AY238518 CU675505 DQ893175 DQ896474 L07555 AK291869 AK303174 AK303383 BC007037 NM_001781 Z22576	11989	-	AF175206 AF175207 AF267244 AF267245 NM_016523 AJ305370 BC096734 BC098166 BC098257 BC098354	78630	+	X96719 AY142147 AB015628 BC005254 AK311232 TSC_hg19_v1_chr12_-_10021954 AK313916 AK307334	120492	-	AF518873|CLECL1|160365|C-type lectin-like 1##BC093857|CLECL1|160365|C-type lectin-like 1##BC093859|CLECL1|160365|C-type lectin-like 1##NM_001253748|CLECL1|160365|C-type lectin-like 1##NM_001253750|CLECL1|160365|C-type lectin-like 1##NM_172004|CLECL1|160365|C-type lectin-like 1##BC063128|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D##NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D##AK310150|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D##AK310554|CLEC2D|29121|C-type lectin domain family 2, member D##AK313554|CLEC2D|29121|C-type lectin domain family 2, member D##BC019883|CLEC2D|29121|C-type lectin domain family 2, member D##AF133299|CLEC2D|29121|C-type lectin domain family 2, member D##AF285087|CLEC2D|29121|C-type lectin domain family 2, member D##FN813349|CLEC2D|29121|C-type lectin domain family 2, member D##FN813350|CLEC2D|29121|C-type lectin domain family 2, member D##FN813351|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D##AK096274|LOC374443|374443|CLR pseudogene##AY238518|CD69|969|CD69 molecule##DQ893175|CD69|969|CD69 molecule##DQ896474|CD69|969|CD69 molecule##L07555|CD69|969|CD69 molecule##AK291869|CD69|969|CD69 molecule##AK303174|CD69|969|CD69 molecule##AK303383|CD69|969|CD69 molecule##BC007037|CD69|969|CD69 molecule##NM_001781|CD69|969|CD69 molecule##Z22576|CD69|969|CD69 molecule##AF175206|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF175207|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267244|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267245|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##NM_016523|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AJ305370|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC096734|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098166|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098257|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098354|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##X96719|CLEC2B|9976|C-type lectin domain family 2, member B##AY142147|CLEC2B|9976|C-type lectin domain family 2, member B##AB015628|CLEC2B|9976|C-type lectin domain family 2, member B##BC005254|CLEC2B|9976|C-type lectin domain family 2, member B##AK311232|CLEC2B|9976|C-type lectin domain family 2, member B##AK313916|CLEC2B|9976|C-type lectin domain family 2, member B##AK307334|CLEC2B|9976|C-type lectin domain family 2, member B	0.981605	CTCF.p2:-19:0.982
chr12	56858202	56858313	reg1004416.p1	13.121	+	HQ258134 BC074913 BC117474 NM_012064	-9841	-	TSC_hg19_v1_chr12_-_56843191 BC031514 AF098162 AK296869 BC039842 NM_003920	-15064	-	CU693184 L27050 AK314892 BC026257 NM_001638 CR936663	-101691	-	NM_207344 TSC_hg19_v1_chr12_+_56862350 AF451989 AK300594 AL832247 BC020844 AK291920 BX647957 AK074733 AF289571	4095	+	AK289471 BC025661 BC036929 AK000467 AF110330 AK303772 AF223944 AK294822 BC119767 BC119768 BC059370 BC048344 NM_013267	23783	-	TSC_hg19_v1_chr12_+_56915603 NM_002898 BC072679 AK308885 AK293315 AK304540 D28483 AK299580 BC027863 CU693300	57440	+	HQ258134|MIP|4284|major intrinsic protein of lens fiber##BC074913|MIP|4284|major intrinsic protein of lens fiber##BC117474|MIP|4284|major intrinsic protein of lens fiber##NM_012064|MIP|4284|major intrinsic protein of lens fiber##BC031514|TIMELESS|8914|timeless homolog (Drosophila)##AF098162|TIMELESS|8914|timeless homolog (Drosophila)##AK296869|TIMELESS|8914|timeless homolog (Drosophila)##BC039842|TIMELESS|8914|timeless homolog (Drosophila)##NM_003920|TIMELESS|8914|timeless homolog (Drosophila)##L27050|APOF|319|apolipoprotein F##AK314892|APOF|319|apolipoprotein F##BC026257|APOF|319|apolipoprotein F##NM_001638|APOF|319|apolipoprotein F##CR936663|APOF|319|apolipoprotein F##NM_207344|SPRYD4|283377|SPRY domain containing 4##AF451989|SPRYD4|283377|SPRY domain containing 4##AK300594|SPRYD4|283377|SPRY domain containing 4##AL832247|SPRYD4|283377|SPRY domain containing 4##BC020844|SPRYD4|283377|SPRY domain containing 4##AK291920|SPRYD4|283377|SPRY domain containing 4##BX647957|SPRYD4|283377|SPRY domain containing 4##AK074733|SPRYD4|283377|SPRY domain containing 4##AF289571|SPRYD4|283377|SPRY domain containing 4##AK289471|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC025661|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC036929|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK000467|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF110330|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK303772|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF223944|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK294822|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119767|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119768|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC059370|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC048344|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_013267|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_002898|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC072679|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK308885|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK293315|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK304540|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##D28483|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK299580|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC027863|RBMS2|5939|RNA binding motif, single stranded interacting protein 2	0.988642	CTCF.p2:20:0.989
chr14	77339282	77339412	reg1004719.p1	13.121	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-46552	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-60085	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-60137	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	155337	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	155713	-	AK124327 TSC_hg19_v1_chr14_-_77542533	203186	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.141045	
chr14	96460799	96460911	reg1003277.p2	13.121	+	AK023027 TSC_hg19_v1_chr14_+_96342762	-118110	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-280388	-	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	-308077	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	44791	+	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	210222	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	210341	+	AK023027|LOC100507043|100507043|uncharacterized LOC100507043##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2	0.988385	CTCF.p2:3:0.988
chr11	40315738	40315863	reg1004645.p1	13.120	+	AB046800 NM_020929	-137	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-1206	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-3695998	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	3017718	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	3017764	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	3017840	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.996523	CTCF.p2:17:0.997
chr14	75773757	75773888	reg1001292.p1	13.120	+	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	-28240	+	TSC_hg19_v1_chr14_-_75643341 NM_006827	-130470	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	-130489	-	NM_001135047 TSC_hg19_v1_chr14_+_75894724	120819	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	121191	+	BC051303 NM_001135049	125014	+	NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##NM_006827|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2	0.048476	
chrX	19352349	19352492	reg1003024.p1	13.120	+	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	-211753	-	TSC_hg19_v1_chrX_-_19002476 NM_000292	-349958	-	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	-643376	+	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	9662	+	NM_001001671	180958	-	TSC_hg19_v1_chrX_-_19689029 AK293237 NM_001184960	336636	-	BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001001671|MAP3K15|389840|mitogen-activated protein kinase kinase kinase 15##AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1	0.0	
chr1	46645316	46645431	reg1004662.p1	13.119	+	NM_005727 AK313774	-4620	+	TSC_hg19_v1_chr1_-_46598298 CR749649 BC021622 NM_003629 EU832448 EU832531 BX537388 BC094768 AK313726 NM_001114172	-46895	-	TSC_hg19_v1_chr1_+_46379267 AK027123 AK309510	-266111	+	TSC_hg19_v1_chr1_+_46646203 BC007290 BC000695 BC013404 AF065388 AF133425	837	+	AB057356 TSC_hg19_v1_chr1_-_46664095 AY358592 AK000284 AK225033	18702	-	TSC_hg19_v1_chr1_-_46664112 BC001471 NM_017739	18752	-	NM_005727|TSPAN1|10103|tetraspanin 1##AK313774|TSPAN1|10103|tetraspanin 1##CR749649|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BC021622|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_003629|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##EU832448|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##EU832531|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BX537388|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BC094768|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##AK313726|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_001114172|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##AK027123|MAST2|23139|microtubule associated serine/threonine kinase 2##AK309510|MAST2|23139|microtubule associated serine/threonine kinase 2##BC007290|TSPAN1|10103|tetraspanin 1##BC000695|TSPAN1|10103|tetraspanin 1##BC013404|TSPAN1|10103|tetraspanin 1##AF065388|TSPAN1|10103|tetraspanin 1##AF133425|TSPAN1|10103|tetraspanin 1##AB057356|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##AY358592|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##AK000284|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##AK225033|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##BC001471|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##NM_017739|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase	0.999686	CTCF.p2:22:1.000
chr5	132623342	132623446	reg1004052.p1	13.119	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-190503	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-194991	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-217291	+	TSC_hg19_v1_chr5_-_132948202 AK055684	324805	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	324844	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	680981	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.247555	CTCF.p2:0:0.248
chr6	5471317	5471461	reg1006080.p1	13.119	+	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-209699	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-210127	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-210223	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	535752	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	536308	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	849496	-	NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide	0.386452	CTCF.p2:-7:0.386
chr16	46707434	46707568	reg1006070.p1	13.118	+	TSC_hg19_v1_chr16_-_46655304 NM_024745	-52195	-	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	-52229	-	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-13445368	+	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	15561	-	TSC_hg19_v1_chr16_-_46723112 NM_018206	15626	-	BC050725 NM_014321 AK024019 TSC_hg19_v1_chr16_+_46723570 AK024077	16064	+	NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##NM_018206|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC050725|ORC6|23594|origin recognition complex, subunit 6##NM_014321|ORC6|23594|origin recognition complex, subunit 6##AK024019|ORC6|23594|origin recognition complex, subunit 6##AK024077|ORC6|23594|origin recognition complex, subunit 6	0.963305	CTCF.p2:-7:0.963
chr7	102386059	102386184	reg1005748.p1	13.118	+	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	-74001	-	AK302217 NM_001031618 NM_001166339	-95350	+	EU341824 NM_001114403 AK296589	-102845	-	TSC_hg19_v1_chr7_+_102389473 NM_001145268 NM_001145269 BC029175 AK297455 AK298753 AK054745 DQ893359 DQ896678	3369	+	NM_001031692 NM_005824 TSC_hg19_v1_chr7_+_102553446 AK226021 AK225701 U32907 AK290305 BC027903 AY358889	167311	+	AK097537 NM_145032	328893	-	BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##EU341824|UPK3BL|100134938|uroplakin 3B-like##NM_001114403|UPK3BL|100134938|uroplakin 3B-like##NM_001145268|FAM185A|222234|family with sequence similarity 185, member A##NM_001145269|FAM185A|222234|family with sequence similarity 185, member A##BC029175|FAM185A|222234|family with sequence similarity 185, member A##AK297455|FAM185A|222234|family with sequence similarity 185, member A##AK298753|FAM185A|222234|family with sequence similarity 185, member A##AK054745|FAM185A|222234|family with sequence similarity 185, member A##DQ893359|FAM185A|222234|family with sequence similarity 185, member A##DQ896678|FAM185A|222234|family with sequence similarity 185, member A##NM_001031692|LRRC17|10234|leucine rich repeat containing 17##NM_005824|LRRC17|10234|leucine rich repeat containing 17##AK226021|LRRC17|10234|leucine rich repeat containing 17##AK225701|LRRC17|10234|leucine rich repeat containing 17##U32907|LRRC17|10234|leucine rich repeat containing 17##AK290305|LRRC17|10234|leucine rich repeat containing 17##BC027903|LRRC17|10234|leucine rich repeat containing 17##AY358889|LRRC17|10234|leucine rich repeat containing 17##AK097537|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_145032|FBXL13|222235|F-box and leucine-rich repeat protein 13	0.224979	CTCF.p2:11:0.225
chr17	16356662	16356788	reg1005200.p1	13.117	+	TSC_hg19_v1_chr17_+_16342350 AK098643 AK307982 AK308482 AK309961 BX538291 AK311247 BC027986 BC040159	-14365	+	TSC_hg19_v1_chr17_+_16319096 AF103906	-37620	+	TSC_hg19_v1_chr17_+_16318917 AK001896	-37807	+	TSC_hg19_v1_chr17_-_16395091 AK093015 AX747857 BC144381	38428	-	NM_001113567 NM_207387 TSC_hg19_v1_chr17_-_16395510	38782	-	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	115771	-	AK098643|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK307982|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK308482|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK309961|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##BX538291|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK311247|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##BC027986|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##BC040159|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AF103906|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AK001896|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AK093015|FAM211A|388341|family with sequence similarity 211, member A##BC144381|FAM211A|388341|family with sequence similarity 211, member A##NM_001113567|FAM211A|388341|family with sequence similarity 211, member A##NM_207387|FAM211A|388341|family with sequence similarity 211, member A##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287	0.99948	CTCF.p2:-1:0.999
chr17	31264071	31264188	reg1005970.p1	13.117	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-8926	+	NM_001033504 NM_015544	-9202	+	TSC_hg19_v1_chr17_-_31204196 BC030602	-59916	-	AF216311 NM_173847 BC100886 BC100887	54773	+	AL834182 NM_183377	355876	-	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	1219558	-	AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##NM_001033504|TMEM98|26022|transmembrane protein 98##NM_015544|TMEM98|26022|transmembrane protein 98##BC030602|MYO1D|4642|myosin ID##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal	0.999766	CTCF.p2:-1:1.000
chr1	85773959	85774071	reg1004510.p1	13.117	+	NM_003921	-31429	-	AK098790 AF105066 AF127386 CU691004 AB527491 EF189176 BC053617 TSC_hg19_v1_chr1_-_85742229 BX647306 AK291346 AF100338 AF057700 AF134395	-31880	-	AF387611 AF387612 AY486331 AY486332 BC029538 TSC_hg19_v1_chr1_-_85725338 AK126929 NM_198077	-48676	-	BC043235 TSC_hg19_v1_chr1_-_85930637	156610	-	TSC_hg19_v1_chr1_-_85930843 BC033680 AK312432 NM_012137	156925	-	BX648145 NM_001134445 AK304876	269975	-	NM_003921|BCL10|8915|B-cell CLL/lymphoma 10##AF105066|BCL10|8915|B-cell CLL/lymphoma 10##AF127386|BCL10|8915|B-cell CLL/lymphoma 10##EF189176|BCL10|8915|B-cell CLL/lymphoma 10##BC053617|BCL10|8915|B-cell CLL/lymphoma 10##BX647306|BCL10|8915|B-cell CLL/lymphoma 10##AK291346|BCL10|8915|B-cell CLL/lymphoma 10##AF100338|BCL10|8915|B-cell CLL/lymphoma 10##AF057700|BCL10|8915|B-cell CLL/lymphoma 10##AF134395|BCL10|8915|B-cell CLL/lymphoma 10##AF387611|C1orf52|148423|chromosome 1 open reading frame 52##AF387612|C1orf52|148423|chromosome 1 open reading frame 52##AY486331|C1orf52|148423|chromosome 1 open reading frame 52##AY486332|C1orf52|148423|chromosome 1 open reading frame 52##BC029538|C1orf52|148423|chromosome 1 open reading frame 52##AK126929|C1orf52|148423|chromosome 1 open reading frame 52##NM_198077|C1orf52|148423|chromosome 1 open reading frame 52##BC043235|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##BC033680|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##AK312432|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##NM_012137|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	1.020697	CTCF.p2:-24:0.998
chr19	14429819	14429956	reg1007757.p1	13.117	+	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	-112839	-	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	-169087	-	TSC_hg19_v1_chr19_+_14247979 BX537706	-181896	+	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	62162	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	62368	+	TSC_hg19_v1_chr19_-_14529877 AK301847	100002	-	AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule##AK301847|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A	0.021239	
chr20	61810747	61810852	reg1004240.p2	13.115	+	BC137288 BC137308 NM_080606	-172413	-	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-226674	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-226769	+	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	36724	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	56542	+	TSC_hg19_v1_chr20_-_61884664 AK308958	73934	-	BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7##AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4	1.121777	CTCF.p2:12:0.960
chr15	68598657	68598773	reg1001717.p1	13.114	+	TSC_hg19_v1_chr15_+_68570434 AK290167	-28291	+	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	-28622	+	CR457244 DQ891480 EU176598 BC013130 BC010849 TSC_hg19_v1_chr15_-_68522011 AK291175 AK293155 AK000568 AK027604 NM_017882	-76709	-	TSC_hg19_v1_chr15_-_68724505 AF109681 AF137378 NM_001004439 AK292445 AK304778 AK095863	125783	-	TSC_hg19_v1_chr15_+_68871402 NM_006091	272628	+	NM_001190456	310163	+	AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##CR457244|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##DQ891480|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##EU176598|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC013130|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC010849|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK291175|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK293155|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK000568|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK027604|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##NM_017882|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AF109681|ITGA11|22801|integrin, alpha 11##AF137378|ITGA11|22801|integrin, alpha 11##NM_001004439|ITGA11|22801|integrin, alpha 11##AK292445|ITGA11|22801|integrin, alpha 11##AK304778|ITGA11|22801|integrin, alpha 11##AK095863|ITGA11|22801|integrin, alpha 11##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B	0.026012	
chr3	73135275	73135399	reg1006079.p1	13.114	+	BC051316 BC064501 NM_018029	-24528	+	TSC_hg19_v1_chr3_+_73046081 AF327345 NM_174907 BC128136 BC128137	-89217	+	TSC_hg19_v1_chr3_+_73045984 BC110889	-89346	+	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	538701	-	AB384611 BC150608 NM_020872	1434965	-	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	2348812	-	BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene	0.993209	CTCF.p2:6:0.993
chr8	94706451	94706581	reg1005267.p1	13.114	+	BC089453 NM_001242668	-527438	-	NM_001191035 TSC_hg19_v1_chr8_-_93978373 BC031029 AK097956 BC110326 DQ351291 NM_001171795 NM_001171796 NM_001171797 NM_001171798 NM_001171799	-728194	-	AK096398 NM_001191036	-728751	-	BC037909 TSC_hg19_v1_chr8_-_94712710	6170	-	BC014598 TSC_hg19_v1_chr8_+_94712788 BC108707 NM_145269 CR627475 DQ327715 DQ327716 AK096298 CU677061	6288	+	BC039260 TSC_hg19_v1_chr8_-_94753192	46675	-	BC089453|LOC389676|389676|uncharacterized LOC389676##NM_001242668|LOC389676|389676|uncharacterized LOC389676##NM_001191035|C8orf83|286144|chromosome 8 open reading frame 83##BC031029|C8orf83|286144|chromosome 8 open reading frame 83##AK097956|C8orf83|286144|chromosome 8 open reading frame 83##BC110326|C8orf83|286144|chromosome 8 open reading frame 83##DQ351291|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171795|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171796|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171797|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171798|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171799|C8orf83|286144|chromosome 8 open reading frame 83##AK096398|C8orf83|286144|chromosome 8 open reading frame 83##NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83##BC037909|LOC642924|642924|uncharacterized LOC642924##BC014598|FAM92A1|137392|family with sequence similarity 92, member A1##BC108707|FAM92A1|137392|family with sequence similarity 92, member A1##NM_145269|FAM92A1|137392|family with sequence similarity 92, member A1##CR627475|FAM92A1|137392|family with sequence similarity 92, member A1##DQ327715|FAM92A1|137392|family with sequence similarity 92, member A1##DQ327716|FAM92A1|137392|family with sequence similarity 92, member A1##AK096298|FAM92A1|137392|family with sequence similarity 92, member A1##BC039260|RBM12B|389677|RNA binding motif protein 12B	0.293088	CTCF.p2:-14:0.293
chr11	133920498	133920616	reg1004887.p2	13.113	+	NM_014987 TSC_hg19_v1_chr11_-_133826886	-93675	-	AF521713 AK098717 NM_174927 BC058039	-205176	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	-518243	-	AJ416101 NM_001205329 NM_032801 AY358335 TSC_hg19_v1_chr11_+_133938938 AK074769 AF448478	18324	+	AK075309 AK125071 AK225666 TSC_hg19_v1_chr11_+_133938965 BC057284 AJ344431 AF356518 BC012147 BC010690	18415	+	TSC_hg19_v1_chr11_-_134093862 D29954	173289	-	NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AJ416101|JAM3|83700|junctional adhesion molecule 3##NM_001205329|JAM3|83700|junctional adhesion molecule 3##NM_032801|JAM3|83700|junctional adhesion molecule 3##AY358335|JAM3|83700|junctional adhesion molecule 3##AK074769|JAM3|83700|junctional adhesion molecule 3##AF448478|JAM3|83700|junctional adhesion molecule 3##AK075309|JAM3|83700|junctional adhesion molecule 3##AK125071|JAM3|83700|junctional adhesion molecule 3##AK225666|JAM3|83700|junctional adhesion molecule 3##BC057284|JAM3|83700|junctional adhesion molecule 3##AJ344431|JAM3|83700|junctional adhesion molecule 3##AF356518|JAM3|83700|junctional adhesion molecule 3##BC012147|JAM3|83700|junctional adhesion molecule 3##BC010690|JAM3|83700|junctional adhesion molecule 3##D29954|NCAPD3|23310|non-SMC condensin II complex, subunit D3	0.252077	
chr12	63187880	63187992	reg1004266.p2	13.113	+	BC136288 AK098456 NM_175895	-190726	-	AK022671 TSC_hg19_v1_chr12_+_62954346	-233625	+	BC042679 AB017814 AB384555 TSC_hg19_v1_chr12_+_62861012	-327021	+	TSC_hg19_v1_chr12_-_63328666 NM_020700 BC157843	140769	-	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	140989	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	356735	-	BC136288|C12orf61|283416|chromosome 12 open reading frame 61##AK098456|C12orf61|283416|chromosome 12 open reading frame 61##NM_175895|C12orf61|283416|chromosome 12 open reading frame 61##AK022671|MON2|23041|MON2 homolog (S. cerevisiae)##AB017814|MON2|23041|MON2 homolog (S. cerevisiae)##NM_020700|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC157843|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A	0.977823	CTCF.p2:6:0.978
chr15	32954952	32955089	reg1006083.p1	13.113	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	-21106	+	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	-47258	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-632277	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	55237	+	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	56146	-	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	405215	-	NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1	0.999371	CTCF.p2:-11:0.999
chr7	87427265	87427394	reg1005950.p1	13.113	+	AF345623 AF345624 AY425005 AY425006 M14758 AF345625 AK290159 NM_000927 AY425007 AY452673	-84682	-	TSC_hg19_v1_chr7_+_87257708 AK055233 NM_001134405 NM_001134406 NM_138290 BC022520 AK293607 AK294039	-169512	+	TSC_hg19_v1_chr7_-_87230197 AF016535 BC130424	-197050	-	TSC_hg19_v1_chr7_-_87505468 AK290848	78136	-	AB028069 AB028070 NM_006716	78214	+	TSC_hg19_v1_chr7_-_87505642 AK223020	78315	-	AY425005|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AY425006|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##M14758|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AF345625|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK290159|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##NM_000927|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AY425007|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK055233|RUNDC3B|154661|RUN domain containing 3B##NM_001134405|RUNDC3B|154661|RUN domain containing 3B##NM_001134406|RUNDC3B|154661|RUN domain containing 3B##NM_138290|RUNDC3B|154661|RUN domain containing 3B##BC022520|RUNDC3B|154661|RUN domain containing 3B##AK293607|RUNDC3B|154661|RUN domain containing 3B##AK294039|RUNDC3B|154661|RUN domain containing 3B##AF016535|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##BC130424|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK290848|SLC25A40|55972|solute carrier family 25, member 40##AB028069|DBF4|10926|DBF4 homolog (S. cerevisiae)##AB028070|DBF4|10926|DBF4 homolog (S. cerevisiae)##NM_006716|DBF4|10926|DBF4 homolog (S. cerevisiae)##AK223020|SLC25A40|55972|solute carrier family 25, member 40	0.512159	CTCF.p2:-15:0.512
chr2	122476419	122476538	reg1004796.p1	13.112	+	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-68833	+	TSC_hg19_v1_chr2_-_122407024 BC112940 AK091140 AX746802 BC132723 BC144107 AK299331 AJ288057 NM_001142273 NM_001142274 NM_001207051 NM_015282	-69456	-	AK297259 TSC_hg19_v1_chr2_-_122247924	-228559	-	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	17987	-	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	36759	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	2306386	+	BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##BC112940|CLASP1|23332|cytoplasmic linker associated protein 1##AK091140|CLASP1|23332|cytoplasmic linker associated protein 1##BC132723|CLASP1|23332|cytoplasmic linker associated protein 1##BC144107|CLASP1|23332|cytoplasmic linker associated protein 1##AK299331|CLASP1|23332|cytoplasmic linker associated protein 1##AJ288057|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142273|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142274|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001207051|CLASP1|23332|cytoplasmic linker associated protein 1##NM_015282|CLASP1|23332|cytoplasmic linker associated protein 1##AK297259|CLASP1|23332|cytoplasmic linker associated protein 1##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5	0.323172	CTCF.p2:16:0.323
chr12	77015411	77015521	reg1004739.p1	13.111	+	TSC_hg19_v1_chr12_-_76953586 AF323730 AF392452 NM_001003712 NM_020841	-61858	-	TSC_hg19_v1_chr12_-_76953526 BC082235	-61935	-	BC111728 TSC_hg19_v1_chr12_-_76953484	-61983	-	TSC_hg19_v1_chr12_+_77157882 NM_015336 BC030990	142396	+	TSC_hg19_v1_chr12_+_77157894 BC050324 AB023163	142438	+	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	142560	+	AF323730|OSBPL8|114882|oxysterol binding protein-like 8##AF392452|OSBPL8|114882|oxysterol binding protein-like 8##NM_001003712|OSBPL8|114882|oxysterol binding protein-like 8##NM_020841|OSBPL8|114882|oxysterol binding protein-like 8##BC082235|OSBPL8|114882|oxysterol binding protein-like 8##BC111728|OSBPL8|114882|oxysterol binding protein-like 8##NM_015336|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC030990|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC050324|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB023163|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17	0.998076	CTCF.p2:-12:0.998
chr3	12909584	12909698	reg1004909.p1	13.110	+	BC011514 BC070209 X03342 D28385 AK311909 TSC_hg19_v1_chr3_-_12883042 NM_000994 NM_001007073	-26598	-	NM_001007074	-27693	-	GU727621 NM_001162499 NM_012298 BC136592 AB014567	-71435	+	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	31967	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	99467	-	TSC_hg19_v1_chr3_-_13057189 BC071805	147577	-	BC011514|RPL32|6161|ribosomal protein L32##BC070209|RPL32|6161|ribosomal protein L32##X03342|RPL32|6161|ribosomal protein L32##D28385|RPL32|6161|ribosomal protein L32##AK311909|RPL32|6161|ribosomal protein L32##NM_000994|RPL32|6161|ribosomal protein L32##NM_001007073|RPL32|6161|ribosomal protein L32##NM_001007074|RPL32|6161|ribosomal protein L32##GU727621|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_001162499|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_012298|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##BC136592|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##AB014567|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1##AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1	0.987086	CTCF.p2:-16:0.924
chr4	6548463	6548580	reg1005471.p1	13.110	+	AF145027 TSC_hg19_v1_chr4_-_6474250	-74310	-	AF086924 TSC_hg19_v1_chr4_-_6474082	-74476	-	BC032954 NM_001206996	-125677	-	AK316003 NM_001206995	8883	-	AK296474 NM_001206994	16805	-	TSC_hg19_v1_chr4_+_6576906 BC094773 NM_015274	28385	+	AF145027|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##AF086924|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##BC032954|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##NM_001206996|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##AK316003|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##NM_001206995|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##AK296474|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##NM_001206994|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##BC094773|MAN2B2|23324|mannosidase, alpha, class 2B, member 2##NM_015274|MAN2B2|23324|mannosidase, alpha, class 2B, member 2	1.033955	CTCF.p2:16:1.000
chr12	121409645	121409787	reg1006383.p1	13.109	+	TSC_hg19_v1_chr12_-_121342070 AK223590 NM_139015	-67582	-	AY169313 TSC_hg19_v1_chr12_-_121341927 BC073910 AK291161	-67752	-	AK074916 TSC_hg19_v1_chr12_-_121248688	-161033	-	TSC_hg19_v1_chr12_+_121416378 X71346 HM116541 HM116542 HM116543 HM116544 HM116545 HM116546 HM116547 HM116548 HM116549 HM116550 HM116551 X71347 HM116552 HM116557 HM116558 HM116559 HM116560 HM116561 HM116562 HM116563 AK298422	6681	+	HM449088 HM449089 M57732 NM_000545 BC104908 BC104910 BC143483 TSC_hg19_v1_chr12_+_121416562 AB527468 EU446660	6842	+	TSC_hg19_v1_chr12_-_121454230 BC014661	44528	-	AK223590|SPPL3|121665|signal peptide peptidase-like 3##NM_139015|SPPL3|121665|signal peptide peptidase-like 3##AY169313|SPPL3|121665|signal peptide peptidase-like 3##BC073910|SPPL3|121665|signal peptide peptidase-like 3##AK291161|SPPL3|121665|signal peptide peptidase-like 3##AK074916|SPPL3|121665|signal peptide peptidase-like 3##X71346|HNF1A|6927|HNF1 homeobox A##HM116541|HNF1A|6927|HNF1 homeobox A##HM116542|HNF1A|6927|HNF1 homeobox A##HM116543|HNF1A|6927|HNF1 homeobox A##HM116544|HNF1A|6927|HNF1 homeobox A##HM116545|HNF1A|6927|HNF1 homeobox A##HM116546|HNF1A|6927|HNF1 homeobox A##HM116547|HNF1A|6927|HNF1 homeobox A##HM116548|HNF1A|6927|HNF1 homeobox A##HM116549|HNF1A|6927|HNF1 homeobox A##X71347|HNF1A|6927|HNF1 homeobox A##HM116552|HNF1A|6927|HNF1 homeobox A##HM116557|HNF1A|6927|HNF1 homeobox A##HM116558|HNF1A|6927|HNF1 homeobox A##HM116559|HNF1A|6927|HNF1 homeobox A##HM116560|HNF1A|6927|HNF1 homeobox A##HM116561|HNF1A|6927|HNF1 homeobox A##HM116563|HNF1A|6927|HNF1 homeobox A##AK298422|HNF1A|6927|HNF1 homeobox A##HM449088|HNF1A|6927|HNF1 homeobox A##HM449089|HNF1A|6927|HNF1 homeobox A##M57732|HNF1A|6927|HNF1 homeobox A##NM_000545|HNF1A|6927|HNF1 homeobox A##BC104908|HNF1A|6927|HNF1 homeobox A##BC104910|HNF1A|6927|HNF1 homeobox A##BC143483|HNF1A|6927|HNF1 homeobox A##EU446660|HNF1A|6927|HNF1 homeobox A##BC014661|C12orf43|64897|chromosome 12 open reading frame 43	0.548405	CTCF.p2:9:0.548
chr12	52397981	52398105	reg1004972.p1	13.109	+	AK299496 NM_020327	-50880	+	TSC_hg19_v1_chr12_+_52345493 AK299120 L10125 BC000254 AB384957 BT007072 CU674106 EU831986 EU832079 L10126 U14722 Z22536	-52546	+	TSC_hg19_v1_chr12_+_52345437 BC040531 NM_004302 NM_020328	-52598	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	2698	+	AK297526 NM_001202233	18572	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	47173	+	AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB##AK299120|ACVR1B|91|activin A receptor, type IB##L10125|ACVR1B|91|activin A receptor, type IB##BC000254|ACVR1B|91|activin A receptor, type IB##BT007072|ACVR1B|91|activin A receptor, type IB##EU831986|ACVR1B|91|activin A receptor, type IB##EU832079|ACVR1B|91|activin A receptor, type IB##L10126|ACVR1B|91|activin A receptor, type IB##U14722|ACVR1B|91|activin A receptor, type IB##Z22536|ACVR1B|91|activin A receptor, type IB##BC040531|ACVR1B|91|activin A receptor, type IB##NM_004302|ACVR1B|91|activin A receptor, type IB##NM_020328|ACVR1B|91|activin A receptor, type IB##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1	0.997896	CTCF.p2:-20:0.998
chr7	77388745	77388862	reg1004834.p2	13.109	+	TSC_hg19_v1_chr7_+_77325775 NM_198467 BC059402 BC046353	-63046	+	TSC_hg19_v1_chr7_-_77325573 BC037783	-63242	-	AK303602 NM_001131008 NM_001131009 AK296764	-221435	+	BC012192 TSC_hg19_v1_chr7_-_77427680 BC065930	38865	-	TSC_hg19_v1_chr7_-_77427744 AF260336 NM_032936	38944	-	TSC_hg19_v1_chr7_+_77428194 NM_001127358 NM_001127360 AK225854 AK090643 AX746556 AK308289	39338	+	NM_198467|RSBN1L|222194|round spermatid basic protein 1-like##BC059402|RSBN1L|222194|round spermatid basic protein 1-like##BC046353|RSBN1L|222194|round spermatid basic protein 1-like##AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##BC012192|TMEM60|85025|transmembrane protein 60##BC065930|TMEM60|85025|transmembrane protein 60##AF260336|TMEM60|85025|transmembrane protein 60##NM_032936|TMEM60|85025|transmembrane protein 60##NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2##AK225854|PHTF2|57157|putative homeodomain transcription factor 2##AK090643|PHTF2|57157|putative homeodomain transcription factor 2##AK308289|PHTF2|57157|putative homeodomain transcription factor 2	0.97993	CTCF.p2:0:0.980
chr9	27529778	27529903	reg1004325.p3	13.109	+	TSC_hg19_v1_chr9_-_27529809 AL832572 BC033027 AK023266 NM_024761	-190	-	AF146759 AF315688 NM_020124 AY358855 AB463795	-5518	+	BC137351 BC137352 BC144602 BC014307 AJ278482 NM_001161585 NM_020641	-232719	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	43631	-	AK057806 JN681271 NM_145005	44001	-	AK056372 NM_152570	1189462	-	AL832572|MOB3B|79817|MOB kinase activator 3B##BC033027|MOB3B|79817|MOB kinase activator 3B##AK023266|MOB3B|79817|MOB kinase activator 3B##NM_024761|MOB3B|79817|MOB kinase activator 3B##AF146759|IFNK|56832|interferon, kappa##AF315688|IFNK|56832|interferon, kappa##NM_020124|IFNK|56832|interferon, kappa##AY358855|IFNK|56832|interferon, kappa##BC137351|C9orf11|54586|chromosome 9 open reading frame 11##BC137352|C9orf11|54586|chromosome 9 open reading frame 11##BC144602|C9orf11|54586|chromosome 9 open reading frame 11##BC014307|C9orf11|54586|chromosome 9 open reading frame 11##AJ278482|C9orf11|54586|chromosome 9 open reading frame 11##NM_001161585|C9orf11|54586|chromosome 9 open reading frame 11##NM_020641|C9orf11|54586|chromosome 9 open reading frame 11##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2	0.07427	
chr17	3586409	3586521	reg1001550.p1	13.108	+	NM_001014764 NM_031298 TSC_hg19_v1_chr17_+_3572105 BC001409	-14363	+	TSC_hg19_v1_chr17_-_3571905 AF028823 NM_001204698 NM_014604	-14527	-	AB590842 CU692828 TSC_hg19_v1_chr17_-_3571873 AF277318 BC035653 U90913 AF234997 AK001327 AK315408 BC023980	-14617	-	DQ234349 CU691640 AB528606 TSC_hg19_v1_chr17_-_3599311 AF070573 AF016709 U49395 U49396	12847	-	BC006220 BC028084 TSC_hg19_v1_chr17_-_3599406 BC039015	12939	-	AB209623 BC016917 AK307959 TSC_hg19_v1_chr17_-_3599535 BC008319 AK290889 NM_001204519 NM_001204520 NM_002561 NM_175080	13127	-	NM_001014764|TMEM93|83460|transmembrane protein 93##NM_031298|TMEM93|83460|transmembrane protein 93##BC001409|TMEM93|83460|transmembrane protein 93##AF028823|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##NM_001204698|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##NM_014604|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##DQ234349|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AF070573|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AF016709|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##U49395|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##U49396|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC006220|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC028084|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC039015|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AB209623|P2RX5-TAX1BP3|100533970|P2RX5-TAX1BP3 readthrough##BC016917|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK307959|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC008319|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK290889|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204519|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204520|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_002561|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_175080|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5	0.328944	CTCF.p2:-13:0.329
chr16	2390935	2391088	reg1004472.p2	13.107	+	TSC_hg19_v1_chr16_-_2390785 AB210044 NM_001089	-245	-	TSC_hg19_v1_chr16_-_2390730 BC151840	-289	-	AK310864 U78735 TSC_hg19_v1_chr16_-_2390699	-364	-	TSC_hg19_v1_chr16_+_2479392 NM_001761	88380	+	TSC_hg19_v1_chr16_+_2479464 Z36714 AK313371 U17105 BC012349 AB208829 DQ890775	88438	+	AK128408 TSC_hg19_v1_chr16_+_2510099 NM_025108 AK093788 AK301929 AX748307 BC018719 AK023971	119101	+	AB210044|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##NM_001089|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##BC151840|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##AK310864|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##U78735|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##NM_001761|CCNF|899|cyclin F##Z36714|CCNF|899|cyclin F##AK313371|CCNF|899|cyclin F##U17105|CCNF|899|cyclin F##BC012349|CCNF|899|cyclin F##AB208829|CCNF|899|cyclin F##DQ890775|CCNF|899|cyclin F##AK128408|C16orf59|80178|chromosome 16 open reading frame 59##NM_025108|C16orf59|80178|chromosome 16 open reading frame 59##AK093788|C16orf59|80178|chromosome 16 open reading frame 59##AK301929|C16orf59|80178|chromosome 16 open reading frame 59##BC018719|C16orf59|80178|chromosome 16 open reading frame 59##AK023971|C16orf59|80178|chromosome 16 open reading frame 59	0.997583	CTCF.p2:0:0.998
chr1	32914043	32914174	reg1005960.p1	13.106	+	CR457252 TSC_hg19_v1_chr1_-_32860030 BC010573 CR749228 BX641056 AK300231 BC026322 AK297604 AK300306 AK001138 AK225717 AK293454 BC028381 AK021440 AK297352 AK225026 AK304477 AK316172 NM_001143888 NM_001143889 NM_001143890 NM_018045	-54071	-	NM_001167676	-86265	-	BC035354 NM_052841	-86279	+	TSC_hg19_v1_chr1_+_32930659 AK092326 AX747483 NM_001145720	16544	+	NM_001040441	90663	+	TSC_hg19_v1_chr1_+_33005058 AK074546 AY157873 BC015239	90936	+	CR457252|BSDC1|55108|BSD domain containing 1##BC010573|BSDC1|55108|BSD domain containing 1##CR749228|BSDC1|55108|BSD domain containing 1##BX641056|BSDC1|55108|BSD domain containing 1##AK300231|BSDC1|55108|BSD domain containing 1##BC026322|BSDC1|55108|BSD domain containing 1##AK297604|BSDC1|55108|BSD domain containing 1##AK300306|BSDC1|55108|BSD domain containing 1##AK001138|BSDC1|55108|BSD domain containing 1##AK225717|BSDC1|55108|BSD domain containing 1##AK293454|BSDC1|55108|BSD domain containing 1##BC028381|BSDC1|55108|BSD domain containing 1##AK021440|BSDC1|55108|BSD domain containing 1##AK297352|BSDC1|55108|BSD domain containing 1##AK225026|BSDC1|55108|BSD domain containing 1##AK304477|BSDC1|55108|BSD domain containing 1##AK316172|BSDC1|55108|BSD domain containing 1##NM_001143888|BSDC1|55108|BSD domain containing 1##NM_001143889|BSDC1|55108|BSD domain containing 1##NM_001143890|BSDC1|55108|BSD domain containing 1##NM_018045|BSDC1|55108|BSD domain containing 1##NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##NM_001145720|ZBTB8B|728116|zinc finger and BTB domain containing 8B##NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A##AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A##AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A##BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A	0.694154	CTCF.p2:-11:0.694
chr14	93055703	93055848	reg1006329.p1	13.106	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-75816	+	NM_153646 AF520704 AF520705 BC069653	-265599	+	AK295059 NM_153647	-266239	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	62861	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	63048	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	159184	-	AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain	0.99897	CTCF.p2:-7:0.999
chr1	86967928	86968059	reg1006385.p1	13.106	+	NM_001285 TSC_hg19_v1_chr1_+_86934607 AK314375 AK291999 AK097057 AF127036	-33406	+	NM_006536 AF043977 AK296719 AK290348 AK307937 BC041096 AB026833 AF127980	-78144	+	BC091490 TSC_hg19_v1_chr1_-_86862004 AB033055 BC047368 BC009779 BC012579 AK308351 AK302792 BC026105 AK303209 NM_001007022 NM_001184765 NM_001184766 NM_020729	-106018	-	NM_012128 AK000072 AK314430 BC113687 BC113689 AF127035 AY358470 HQ258531 AK307785 AK307898 AK293766	44848	+	TSC_hg19_v1_chr1_+_87170254 NM_001206651 NM_001206652 NM_001206653 NM_016009	202258	+	TSC_hg19_v1_chr1_+_87170289 AK303710 AB007960 AK225864 AK001954	202385	+	NM_001285|CLCA1|1179|chloride channel accessory 1##AK314375|CLCA1|1179|chloride channel accessory 1##AK291999|CLCA1|1179|chloride channel accessory 1##AK097057|CLCA1|1179|chloride channel accessory 1##AF127036|CLCA1|1179|chloride channel accessory 1##NM_006536|CLCA2|9635|chloride channel accessory 2##AF043977|CLCA2|9635|chloride channel accessory 2##AK290348|CLCA2|9635|chloride channel accessory 2##AK307937|CLCA2|9635|chloride channel accessory 2##BC041096|CLCA2|9635|chloride channel accessory 2##AB026833|CLCA2|9635|chloride channel accessory 2##AF127980|CLCA2|9635|chloride channel accessory 2##BC091490|ODF2L|57489|outer dense fiber of sperm tails 2-like##AB033055|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC047368|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC009779|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC012579|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK308351|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK302792|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC026105|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK303209|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001007022|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184765|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184766|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_020729|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_012128|CLCA4|22802|chloride channel accessory 4##AK000072|CLCA4|22802|chloride channel accessory 4##AK314430|CLCA4|22802|chloride channel accessory 4##BC113687|CLCA4|22802|chloride channel accessory 4##BC113689|CLCA4|22802|chloride channel accessory 4##AF127035|CLCA4|22802|chloride channel accessory 4##AY358470|CLCA4|22802|chloride channel accessory 4##HQ258531|CLCA4|22802|chloride channel accessory 4##AK307785|CLCA4|22802|chloride channel accessory 4##AK307898|CLCA4|22802|chloride channel accessory 4##AK293766|CLCA4|22802|chloride channel accessory 4##NM_001206651|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_001206652|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_001206653|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK303710|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AB007960|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK225864|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK001954|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	0.0	
chr20	51833735	51833883	reg1005867.p1	13.106	+	AK302570 NM_001193421	-31988	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	-244031	+	BX640770 NM_173485	-244864	+	AF041259 NM_006526	365826	-	TSC_hg19_v1_chr20_-_52210810 AK290350	376990	-	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	853253	-	AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK290350|ZNF217|7764|zinc finger protein 217##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1	0.999557	CTCF.p2:2:1.000
chr21	34499756	34499880	reg1003420.p2	13.106	+	TSC_hg19_v1_chr21_+_34444006 BC011252	-55773	+	TSC_hg19_v1_chr21_+_34442554 AB463154 DQ896828 BC026989	-57257	+	TSC_hg19_v1_chr21_+_34442446 BC033290 NM_138983 AL834450 AB209791	-57366	+	BC002793 NM_000874 NM_207584 NM_207585 TSC_hg19_v1_chr21_+_34602236	102402	+	TSC_hg19_v1_chr21_+_34602281 L41942 L41944	102461	+	TSC_hg19_v1_chr21_+_34602305 BC013156 X77722 X89814 U29584	102584	+	BC011252|OLIG1|116448|oligodendrocyte transcription factor 1##DQ896828|OLIG1|116448|oligodendrocyte transcription factor 1##BC026989|OLIG1|116448|oligodendrocyte transcription factor 1##BC033290|OLIG1|116448|oligodendrocyte transcription factor 1##NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1##AL834450|OLIG1|116448|oligodendrocyte transcription factor 1##AB209791|OLIG1|116448|oligodendrocyte transcription factor 1##BC002793|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_000874|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207585|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41942|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41944|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##BC013156|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X77722|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X89814|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##U29584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2	0.820235	CTCF.p2:-2:0.820
chr11	62554096	62554210	reg1005212.p1	13.105	+	NM_006473 TSC_hg19_v1_chr11_+_62538867 AK289499 AK310054 AK301145 BC008785 AK314330	-15320	+	TSC_hg19_v1_chr11_+_62529051 AK312131 BC112162 BC112164 U20659 AB464043	-25069	+	NM_002696 TSC_hg19_v1_chr11_+_62529028	-25125	+	AK001998 TSC_hg19_v1_chr11_-_62554819	654	-	TSC_hg19_v1_chr11_+_62554875 NM_199337 BC051355	712	+	BC042801 TSC_hg19_v1_chr11_-_62559478 BC008643 BC094837 BC035565 BC020914 NM_001080501 BC127679	5304	-	NM_006473|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK289499|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK310054|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK301145|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##BC008785|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK314330|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK312131|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##BC112162|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##BC112164|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##U20659|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##NM_002696|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##NM_199337|TMEM179B|374395|transmembrane protein 179B##BC051355|TMEM179B|374395|transmembrane protein 179B##BC042801|TMEM223|79064|transmembrane protein 223##BC008643|TMEM223|79064|transmembrane protein 223##BC094837|TMEM223|79064|transmembrane protein 223##BC035565|TMEM223|79064|transmembrane protein 223##BC020914|TMEM223|79064|transmembrane protein 223##NM_001080501|TMEM223|79064|transmembrane protein 223##BC127679|TMEM223|79064|transmembrane protein 223	1.121801	CTCF.p2:15:0.984
chr3	135794204	135794335	reg1005461.p1	13.105	+	NM_181897 AK316258 L12146	-52651	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	-109649	+	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	-109738	+	AK302491 NM_001145417	119023	-	TSC_hg19_v1_chr3_-_135914658 AK091956 NM_018133	120412	-	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	174895	+	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK302491|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_001145417|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##AK091956|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_018133|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide	0.987996	CTCF.p2:-20:0.988
chr15	60209847	60209995	reg1006845.p1	13.104	+	BC002461 TSC_hg19_v1_chr15_-_59981517 AK308237 NM_004330	-228342	-	TSC_hg19_v1_chr15_-_59981511 U15173	-228447	-	TSC_hg19_v1_chr15_-_59949715 X81713 U21242 U14193 BC000287 BC001919 AK312015 NM_004492	-260271	-	AK290944 NM_012182 TSC_hg19_v1_chr15_+_60296425	86507	+	EF565104 TSC_hg19_v1_chr15_+_60296453	86528	+	TSC_hg19_v1_chr15_+_60296509 AK314075	86628	+	BC002461|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##AK308237|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##NM_004330|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##U15173|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##X81713|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##U21242|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##U14193|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##BC000287|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##BC001919|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##AK312015|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##NM_004492|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##AK290944|FOXB1|27023|forkhead box B1##NM_012182|FOXB1|27023|forkhead box B1##AK314075|FOXB1|27023|forkhead box B1	0.995179	CTCF.p2:-10:0.995
chr17	48246771	48246909	reg1006015.p1	13.104	+	AK300710 TSC_hg19_v1_chr17_+_48243372 L34355 L35853 L46810 NM_000023 NM_001135697 AK293614 AK290622 BC025702 U08895 AB464188 DQ893777 CU693018	-3458	+	AJ401189 NM_032595 TSC_hg19_v1_chr17_-_48227977	-18914	-	TSC_hg19_v1_chr17_-_48207145 BC142728 BC136485 AY148482 NM_174920 AK291482 AK094209 AK225767 BC141822	-39691	-	TSC_hg19_v1_chr17_+_48262817 CU691369	15999	+	J00113 TSC_hg19_v1_chr17_-_48262921 M32790 M32798	16079	-	TSC_hg19_v1_chr17_-_48264068 X06269 S64596	17321	-	AK300710|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L34355|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L35853|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L46810|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##NM_000023|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##NM_001135697|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##AK290622|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##BC025702|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##U08895|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##DQ893777|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##AJ401189|PPP1R9B|84687|protein phosphatase 1, regulatory subunit 9B##NM_032595|PPP1R9B|84687|protein phosphatase 1, regulatory subunit 9B##BC142728|SAMD14|201191|sterile alpha motif domain containing 14##BC136485|SAMD14|201191|sterile alpha motif domain containing 14##AY148482|SAMD14|201191|sterile alpha motif domain containing 14##NM_174920|SAMD14|201191|sterile alpha motif domain containing 14##AK291482|SAMD14|201191|sterile alpha motif domain containing 14##AK094209|SAMD14|201191|sterile alpha motif domain containing 14##AK225767|SAMD14|201191|sterile alpha motif domain containing 14##BC141822|SAMD14|201191|sterile alpha motif domain containing 14##J00113|COL1A1|1277|collagen, type I, alpha 1##M32798|COL1A1|1277|collagen, type I, alpha 1##X06269|COL1A1|1277|collagen, type I, alpha 1##S64596|COL1A1|1277|collagen, type I, alpha 1	0.974819	CTCF.p2:-4:0.975
chr19	7431973	7432127	reg1006501.p1	13.104	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	-138090	-	TSC_hg19_v1_chr19_-_7099547 AK127494	-332499	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-362335	+	TSC_hg19_v1_chr19_+_7460030 NM_015318	27957	+	TSC_hg19_v1_chr19_+_7460061 AB011093	28027	+	AK127045 NM_001130955	72523	+	BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.555204	CTCF.p2:0:0.555
chr9	70137325	70137439	reg1005629.p1	13.103	+	AL136793 NM_001098805	-755402	+	AF265442 BC069006 AK293173 NM_001085457	-874828	-	NM_001085476	-935179	-	NM_001126334	41432	-	NM_001099279 NM_199244	292348	-	CU688346 TSC_hg19_v1_chr9_-_70490092	352699	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.228611	CTCF.p2:-2:0.229
chr5	107978137	107978259	reg1004431.p2	13.102	+	BC063316 NM_001163315	-260400	-	TSC_hg19_v1_chr5_-_107717106 AK126722	-261068	-	AK308672 NM_001962 U26403	-971608	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	85782	-	AK293376 J03358 NM_005246 AK296874	105364	+	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	106474	+	BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AB593118|HP07349|100652853|uncharacterized protein HP07349##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase	0.975189	CTCF.p2:-11:0.975
chr9	114860149	114860278	reg1006115.p1	13.102	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-200746	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-201099	+	AL833535 NM_173521	-314438	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	77307	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	235074	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	235636	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.931436	CTCF.p2:-8:0.841
chr10	125785376	125785487	reg1004123.p1	13.100	+	BC137492 BC146862 AY358565 NM_198148	-133935	-	AJ505757 NM_153442 BC112011 BC113462	-359554	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-871075	+	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	66468	-	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	67722	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	322042	-	BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase	0.997749	CTCF.p2:-8:0.998
chr13	32842123	32842242	reg1005478.p1	13.100	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	-236741	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-421280	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-528469	+	BC146956 BC146965 NM_001136571	43907	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	47435	+	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	160176	-	AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1	0.041313	
chr10	63510822	63510934	reg1004365.p1	13.099	+	BC041932 NM_173554	-88160	+	CR749606 NM_178505	-297671	-	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	-297919	-	NM_032199	150134	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	150553	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	298218	+	BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##CR749606|TMEM26|219623|transmembrane protein 26##NM_178505|TMEM26|219623|transmembrane protein 26##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	0.836738	CTCF.p2:7:0.837
chr2	127729696	127729810	reg1004615.p2	13.099	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-315961	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-316046	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2946889	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	134988	-	BC039307 NM_001001665	233589	-	AK131190 TSC_hg19_v1_chr2_-_127977781	247964	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.569008	CTCF.p2:4:0.361	CTCF.p2:64:0.208
chr6	6547412	6547526	reg1004332.p3	13.099	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-226559	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-226584	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-539772	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	41481	+	BC039678 TSC_hg19_v1_chr6_+_6725205	177692	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	560357	+	NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1	0.999565	CTCF.p2:3:1.000
chr12	105777242	105777368	reg1004077.p2	13.098	+	AJ311378 TSC_hg19_v1_chr12_+_105724640	-52666	+	TSC_hg19_v1_chr12_+_105724468 BC013920 NM_001145199 BC067897 BC045812 BC061920 AK056999 AJ311377	-52834	+	CU689714 AB527678 DQ892107 DQ895301 TSC_hg19_v1_chr12_-_105629989 AK001521 AK290562 AK297100 BC033731 BC028008 AY113704 NM_001251904 NM_018171	-147395	-	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	755377	-	AB011109 BC152462 NM_014840	756505	-	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	864542	-	AJ311378|C12orf75|387882|chromosome 12 open reading frame 75##BC013920|C12orf75|387882|chromosome 12 open reading frame 75##NM_001145199|C12orf75|387882|chromosome 12 open reading frame 75##BC067897|C12orf75|387882|chromosome 12 open reading frame 75##BC045812|C12orf75|387882|chromosome 12 open reading frame 75##BC061920|C12orf75|387882|chromosome 12 open reading frame 75##AK056999|C12orf75|387882|chromosome 12 open reading frame 75##AJ311377|C12orf75|387882|chromosome 12 open reading frame 75##DQ892107|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##DQ895301|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK001521|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK290562|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK297100|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC033731|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC028008|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AY113704|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251904|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_018171|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4	0.992206	CTCF.p2:6:0.992
chr18	43271357	43271493	reg1006140.p1	13.098	+	AF349446 NM_007163	-76660	+	NM_001242692 AK292422	-478473	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-1010557	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	32679	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	32732	+	NM_001146037	35492	+	AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.99482	CTCF.p2:-8:0.995
chr5	9208081	9208198	reg1004547.p2	13.098	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-1338829	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-1338880	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-1339007	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	338055	-	BC095521 NM_019599	422323	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	1041845	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.990901	CTCF.p2:-5:0.991
chr6	108434796	108434897	reg1004216.p1	13.098	+	TSC_hg19_v1_chr6_-_108395940 BC016376 NM_014028	-38907	-	TSC_hg19_v1_chr6_-_108395924 AF533891 AY358795 BC059412 AK129854	-38916	-	TSC_hg19_v1_chr6_-_108395920 BC068581	-38926	-	NM_003269 AF220532	52391	+	BT007114 CR456898 CU677753 EU831975 EU832068 TSC_hg19_v1_chr6_-_108582163 AF062483 AB047360 AF034546	147297	-	TSC_hg19_v1_chr6_-_108582217 BC008444	147348	-	BC016376|OSTM1|28962|osteopetrosis associated transmembrane protein 1##NM_014028|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AF533891|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AY358795|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC059412|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AK129854|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC068581|OSTM1|28962|osteopetrosis associated transmembrane protein 1##NM_003269|NR2E1|7101|nuclear receptor subfamily 2, group E, member 1##AF220532|NR2E1|7101|nuclear receptor subfamily 2, group E, member 1##BT007114|SNX3|8724|sorting nexin 3##CR456898|SNX3|8724|sorting nexin 3##EU831975|SNX3|8724|sorting nexin 3##EU832068|SNX3|8724|sorting nexin 3##AF062483|SNX3|8724|sorting nexin 3##AB047360|SNX3|8724|sorting nexin 3##AF034546|SNX3|8724|sorting nexin 3##BC008444|SNX3|8724|sorting nexin 3	0.723941	CTCF.p2:-4:0.724
chr9	129976821	129976929	reg1003804.p1	13.098	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-91845	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-91913	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-91967	-	NM_032293 AK293732 AK095679	49932	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	182571	+	TSC_hg19_v1_chr9_-_130186602 AK124330	209691	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.376638	CTCF.p2:-1:0.377
chr1	163041737	163041830	reg1003895.p1	13.097	+	EF054877 NM_001113380	-89	+	DQ346663 NM_001113381 AK093959 AK300832 DQ346662 AK312250 AK096204 BC051869 U27768 BC000737 AB528687 AF493928 BT007025	-2679	+	DQ346664 AK295540 NM_005613	-3120	+	TSC_hg19_v1_chr1_-_163113134 AL157502	71371	-	AK026775 AF113212 AF176919 AF172821 TSC_hg19_v1_chr1_-_163114163	72271	-	AB528222 AF493929 AJ891044 AM393870 DQ892138 DQ895332 NM_001195303 CU688814 AF159570 BC030059 TSC_hg19_v1_chr1_-_163172703 AF030108 AB008109 AK315357 BX537427	130882	-	EF054877|RGS4|5999|regulator of G-protein signaling 4##NM_001113380|RGS4|5999|regulator of G-protein signaling 4##DQ346663|RGS4|5999|regulator of G-protein signaling 4##NM_001113381|RGS4|5999|regulator of G-protein signaling 4##AK093959|RGS4|5999|regulator of G-protein signaling 4##AK300832|RGS4|5999|regulator of G-protein signaling 4##DQ346662|RGS4|5999|regulator of G-protein signaling 4##AK312250|RGS4|5999|regulator of G-protein signaling 4##AK096204|RGS4|5999|regulator of G-protein signaling 4##BC051869|RGS4|5999|regulator of G-protein signaling 4##U27768|RGS4|5999|regulator of G-protein signaling 4##BC000737|RGS4|5999|regulator of G-protein signaling 4##AF493928|RGS4|5999|regulator of G-protein signaling 4##BT007025|RGS4|5999|regulator of G-protein signaling 4##DQ346664|RGS4|5999|regulator of G-protein signaling 4##AK295540|RGS4|5999|regulator of G-protein signaling 4##NM_005613|RGS4|5999|regulator of G-protein signaling 4##AL157502|RGS5|8490|regulator of G-protein signaling 5##AK026775|RGS5|8490|regulator of G-protein signaling 5##AF113212|RGS5|8490|regulator of G-protein signaling 5##AF176919|RGS5|8490|regulator of G-protein signaling 5##AF172821|RGS5|8490|regulator of G-protein signaling 5##AF493929|RGS5|8490|regulator of G-protein signaling 5##AJ891044|RGS5|8490|regulator of G-protein signaling 5##AM393870|RGS5|8490|regulator of G-protein signaling 5##DQ892138|RGS5|8490|regulator of G-protein signaling 5##DQ895332|RGS5|8490|regulator of G-protein signaling 5##NM_001195303|RGS5|8490|regulator of G-protein signaling 5##AF159570|RGS5|8490|regulator of G-protein signaling 5##BC030059|RGS5|8490|regulator of G-protein signaling 5##AF030108|RGS5|8490|regulator of G-protein signaling 5##AB008109|RGS5|8490|regulator of G-protein signaling 5##AK315357|RGS5|8490|regulator of G-protein signaling 5##BX537427|RGS5|8490|regulator of G-protein signaling 5	0.76301	CTCF.p2:-15:0.728
chr15	77316762	77316874	reg1004408.p1	13.097	+	TSC_hg19_v1_chr15_+_77287743 AK310072 AB451310 AB451440 AF038602 AF038603 DQ891779 DQ894963 AB528365	-28991	+	AK304052 U94778 AK316220 TSC_hg19_v1_chr15_+_77287720 AK298733	-29112	+	TSC_hg19_v1_chr15_+_77287465 AK309856 NM_003978 AK310126 BC008602	-29328	+	TSC_hg19_v1_chr15_-_77363389 AF054840 CU674348 AB529127 AF133423 AK293677 AK001310 AK001305 BC004280 BC009248 AK075336 AK075482 AK095520 AK298157	46468	-	TSC_hg19_v1_chr15_-_77363454 BC011206 BC000704 AK001326	46665	-	TSC_hg19_v1_chr15_-_77363522 NM_001168412 NM_005724 NM_198902	46726	-	AK310072|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451310|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451440|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038603|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ891779|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ894963|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF054840|TSPAN3|10099|tetraspanin 3##AF133423|TSPAN3|10099|tetraspanin 3##AK293677|TSPAN3|10099|tetraspanin 3##AK001310|TSPAN3|10099|tetraspanin 3##AK001305|TSPAN3|10099|tetraspanin 3##BC004280|TSPAN3|10099|tetraspanin 3##BC009248|TSPAN3|10099|tetraspanin 3##AK075336|TSPAN3|10099|tetraspanin 3##AK075482|TSPAN3|10099|tetraspanin 3##AK298157|TSPAN3|10099|tetraspanin 3##BC011206|TSPAN3|10099|tetraspanin 3##BC000704|TSPAN3|10099|tetraspanin 3##AK001326|TSPAN3|10099|tetraspanin 3##NM_001168412|TSPAN3|10099|tetraspanin 3##NM_005724|TSPAN3|10099|tetraspanin 3##NM_198902|TSPAN3|10099|tetraspanin 3	0.999141	CTCF.p2:-9:0.999
chr1	95550286	95550389	reg1004447.p1	13.097	+	TSC_hg19_v1_chr1_-_95538474 BC011706 AK289395 NM_144988	-11851	-	TSC_hg19_v1_chr1_-_95392690 S80562 BC025372 AK312370 AK298145 NM_001839	-157697	-	CR541848 CU692978 DQ893013 DQ896258 TSC_hg19_v1_chr1_-_95392498	-157864	-	BC108263 NM_001199679	7735	+	TSC_hg19_v1_chr1_+_95582939 NM_152487 AK056404 BC137457 BC137458 BC139737	32623	+	BC063464 NM_001199691	33141	+	BC011706|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##AK289395|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##NM_144988|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##S80562|CNN3|1266|calponin 3, acidic##BC025372|CNN3|1266|calponin 3, acidic##AK312370|CNN3|1266|calponin 3, acidic##AK298145|CNN3|1266|calponin 3, acidic##NM_001839|CNN3|1266|calponin 3, acidic##CR541848|CNN3|1266|calponin 3, acidic##DQ893013|CNN3|1266|calponin 3, acidic##DQ896258|CNN3|1266|calponin 3, acidic##BC108263|TMEM56|148534|transmembrane protein 56##NM_001199679|TMEM56|148534|transmembrane protein 56##NM_152487|TMEM56|148534|transmembrane protein 56##AK056404|TMEM56|148534|transmembrane protein 56##BC137457|TMEM56|148534|transmembrane protein 56##BC137458|TMEM56|148534|transmembrane protein 56##BC139737|TMEM56|148534|transmembrane protein 56##BC063464|TMEM56-RWDD3|100527978|TMEM56-RWDD3 readthrough##NM_001199691|TMEM56-RWDD3|100527978|TMEM56-RWDD3 readthrough	0.947297	CTCF.p2:-6:0.947
chr19	35558128	35558268	reg1004915.p2	13.096	+	TSC_hg19_v1_chr19_+_35550794 X07002	-7388	+	TSC_hg19_v1_chr19_+_35532642 AK315655	-25542	+	TSC_hg19_v1_chr19_+_35532623 BC025716	-25572	+	NM_001136007 NM_001136008 NM_001136009 NM_001136010 NM_001136011 NM_001136012 NM_005971 NM_021910 BC090044 U28249	48566	+	X93036 TSC_hg19_v1_chr19_+_35607221 BC005238 AK311689	49023	+	AJ487959 BC136694 BC136697 BC087848 AY358121 AF467954 TSC_hg19_v1_chr19_-_35625958	67588	-	X07002|HPN|3249|hepsin##AK315655|HPN|3249|hepsin##BC025716|HPN|3249|hepsin##NM_001136007|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136008|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136009|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136010|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136011|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136012|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_005971|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_021910|FXYD3|5349|FXYD domain containing ion transport regulator 3##BC090044|FXYD3|5349|FXYD domain containing ion transport regulator 3##U28249|FXYD3|5349|FXYD domain containing ion transport regulator 3##X93036|FXYD3|5349|FXYD domain containing ion transport regulator 3##BC005238|FXYD3|5349|FXYD domain containing ion transport regulator 3##AK311689|FXYD3|5349|FXYD domain containing ion transport regulator 3##AJ487959|LGI4|163175|leucine-rich repeat LGI family, member 4##BC136694|LGI4|163175|leucine-rich repeat LGI family, member 4##BC136697|LGI4|163175|leucine-rich repeat LGI family, member 4##BC087848|LGI4|163175|leucine-rich repeat LGI family, member 4##AY358121|LGI4|163175|leucine-rich repeat LGI family, member 4##AF467954|LGI4|163175|leucine-rich repeat LGI family, member 4	0.999956	CTCF.p2:-1:1.000
chr22	23657912	23658048	reg1004234.p1	13.096	+	TSC_hg19_v1_chr22_+_23540316 X14677 X14675	-117575	+	TSC_hg19_v1_chr22_+_23523013 X06418 EU216058 EU216059 EU216061 EU216062 EU216063 EU216064 EU216065 EU216067 EU216068 EU216069 EU216070 EU216072	-134931	+	TSC_hg19_v1_chr22_+_23522745 AB209991	-135180	+	TSC_hg19_v1_chr22_-_23744738 AK056130 AK092581 AX747609 AK092530 AX747585	86763	-	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	264455	-	BC056888 AL080197 BC063390 AK310349 NM_016449	316516	-	X06418|BCR|613|breakpoint cluster region##EU216058|BCR|613|breakpoint cluster region##EU216059|BCR|613|breakpoint cluster region##EU216061|BCR|613|breakpoint cluster region##EU216062|BCR|613|breakpoint cluster region##EU216063|BCR|613|breakpoint cluster region##EU216064|BCR|613|breakpoint cluster region##EU216067|BCR|613|breakpoint cluster region##EU216069|BCR|613|breakpoint cluster region##EU216070|BCR|613|breakpoint cluster region##AB209991|BCR|613|breakpoint cluster region##AK056130|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092581|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092530|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43	0.99512	CTCF.p2:-40:0.995
chr17	47772915	47773044	reg1004736.p1	13.095	+	TSC_hg19_v1_chr17_-_47755471 BC003385 AK222589 AK312691 AJ000644 AK303268 AK316366 BC001269 AK293587 AK300616 NM_001007226 NM_001007227 NM_001007228 NM_001007229 NM_001007230 NM_003563	-17547	-	TSC_hg19_v1_chr17_+_47653475 BC022541 AK308928 AY358526 AB385434	-119452	+	TSC_hg19_v1_chr17_+_47653192 AL834282 NM_007225	-119743	+	AK098056 CU680094 DQ893425 EU176812 TSC_hg19_v1_chr17_-_47785254	12214	-	TSC_hg19_v1_chr17_-_47785283 AK296073 D87989 NM_005827 BC011888 AK293563	12319	-	BX641166 TSC_hg19_v1_chr17_-_47785555	12571	-	BC003385|SPOP|8405|speckle-type POZ protein##AK222589|SPOP|8405|speckle-type POZ protein##AK312691|SPOP|8405|speckle-type POZ protein##AJ000644|SPOP|8405|speckle-type POZ protein##AK303268|SPOP|8405|speckle-type POZ protein##AK316366|SPOP|8405|speckle-type POZ protein##BC001269|SPOP|8405|speckle-type POZ protein##AK293587|SPOP|8405|speckle-type POZ protein##AK300616|SPOP|8405|speckle-type POZ protein##NM_001007226|SPOP|8405|speckle-type POZ protein##NM_001007227|SPOP|8405|speckle-type POZ protein##NM_001007228|SPOP|8405|speckle-type POZ protein##NM_001007229|SPOP|8405|speckle-type POZ protein##NM_001007230|SPOP|8405|speckle-type POZ protein##NM_003563|SPOP|8405|speckle-type POZ protein##BC022541|NXPH3|11248|neurexophilin 3##AK308928|NXPH3|11248|neurexophilin 3##AY358526|NXPH3|11248|neurexophilin 3##AL834282|NXPH3|11248|neurexophilin 3##NM_007225|NXPH3|11248|neurexophilin 3##AK098056|SLC35B1|10237|solute carrier family 35, member B1##DQ893425|SLC35B1|10237|solute carrier family 35, member B1##EU176812|SLC35B1|10237|solute carrier family 35, member B1##AK296073|SLC35B1|10237|solute carrier family 35, member B1##D87989|SLC35B1|10237|solute carrier family 35, member B1##NM_005827|SLC35B1|10237|solute carrier family 35, member B1##BC011888|SLC35B1|10237|solute carrier family 35, member B1##AK293563|SLC35B1|10237|solute carrier family 35, member B1##BX641166|SLC35B1|10237|solute carrier family 35, member B1	0.997179	CTCF.p2:10:0.997
chr13	97996905	97997040	reg1004344.p1	13.094	+	AY101770 AK304699 EU446757 TSC_hg19_v1_chr13_+_97928510	-68506	+	BC020430 TSC_hg19_v1_chr13_+_97928308	-68720	+	TSC_hg19_v1_chr13_+_97874708 BC020418	-122258	+	TSC_hg19_v1_chr13_+_97999294 AF339832	2322	+	TSC_hg19_v1_chr13_+_98086350 AK315139 NM_021033 BC041333	89465	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	89730	+	AY101770|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK304699|MBNL2|10150|muscleblind-like 2 (Drosophila)##EU446757|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC020430|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC020418|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK315139|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_021033|RAP2A|5911|RAP2A, member of RAS oncogene family##BC041333|RAP2A|5911|RAP2A, member of RAS oncogene family##AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family	0.959895	CTCF.p2:8:0.960
chr2	190953719	190953862	reg1006177.p1	13.094	+	AF019627 AB527883 EU446953 BC074757 AK291524 AF104922 NM_005259	-26403	-	BC036376 TSC_hg19_v1_chr2_+_190649225 BC008410 AK295602 AK308311 BC084548 AY540751 AK297440 BC096330 BC096331 BC096332 AK316215 AK304634	-304590	+	TSC_hg19_v1_chr2_-_190649075 AK074756 NM_001128150 NM_016467	-304692	-	NM_001042521	48695	+	NM_001042520	61181	+	NM_001042519 BC005083 NM_032321 AK313395	91850	+	AF019627|MSTN|2660|myostatin##EU446953|MSTN|2660|myostatin##BC074757|MSTN|2660|myostatin##AK291524|MSTN|2660|myostatin##AF104922|MSTN|2660|myostatin##NM_005259|MSTN|2660|myostatin##BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_001042521|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042519|C2orf88|84281|chromosome 2 open reading frame 88##BC005083|C2orf88|84281|chromosome 2 open reading frame 88##NM_032321|C2orf88|84281|chromosome 2 open reading frame 88##AK313395|C2orf88|84281|chromosome 2 open reading frame 88	0.931	CTCF.p2:-27:0.931
chr12	121084851	121084979	reg1006199.p1	13.093	+	BC030201 NM_001033677	-6494	+	AK223206 TSC_hg19_v1_chr12_-_121019185 AK303144 AF070660 AF117232 AJ306296 BC012505 NM_015918 NM_198202	-65727	-	AK094011 AK097807 TSC_hg19_v1_chr12_+_120972158 AK126274 AK301608 AB027196 BC016622 BC031596 BC101709 BC101715 BC143493 BT006974 CU677651 D87451 DQ890634 DQ893805	-112415	+	AF169148 AF169149 NM_004276 NM_031205	3455	+	TSC_hg19_v1_chr12_+_121124951 NM_014730	40023	+	TSC_hg19_v1_chr12_+_121124973 D63486 BC016297 BC000371	40124	+	BC030201|CABP1|9478|calcium binding protein 1##NM_001033677|CABP1|9478|calcium binding protein 1##AK223206|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK303144|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF070660|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF117232|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AJ306296|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##BC012505|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015918|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_198202|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK094011|RNF10|9921|ring finger protein 10##AK097807|RNF10|9921|ring finger protein 10##AK126274|RNF10|9921|ring finger protein 10##AK301608|RNF10|9921|ring finger protein 10##AB027196|RNF10|9921|ring finger protein 10##BC016622|RNF10|9921|ring finger protein 10##BC031596|RNF10|9921|ring finger protein 10##BC101709|RNF10|9921|ring finger protein 10##BC101715|RNF10|9921|ring finger protein 10##BC143493|RNF10|9921|ring finger protein 10##BT006974|RNF10|9921|ring finger protein 10##D87451|RNF10|9921|ring finger protein 10##DQ890634|RNF10|9921|ring finger protein 10##DQ893805|RNF10|9921|ring finger protein 10##AF169148|CABP1|9478|calcium binding protein 1##AF169149|CABP1|9478|calcium binding protein 1##NM_004276|CABP1|9478|calcium binding protein 1##NM_031205|CABP1|9478|calcium binding protein 1##NM_014730|MLEC|9761|malectin##D63486|MLEC|9761|malectin##BC016297|MLEC|9761|malectin##BC000371|MLEC|9761|malectin	0.996206	CTCF.p2:0:0.996
chr17	33639870	33639977	reg1003478.p1	13.093	+	TSC_hg19_v1_chr17_+_33570090 NM_144975 AK303632 BX647942 AK054668 AK303299 BC021238	-69830	+	AK097473 BC136422 BC140700 NM_152462	-118530	-	AK095929 BX647642 NM_001033576 NM_173167 AL832355 AL833281	-165076	+	AL831964 BC052586 AK092241 AX747425 TSC_hg19_v1_chr17_-_33700641 NM_001104587 NM_001104588 NM_001104589 NM_001104590 NM_152270	60746	-	AK001122 BC035605 NM_018042	119607	-	TSC_hg19_v1_chr17_-_33775787 CR749630 AK056514 AL832726 AK122750 NM_144682	135888	-	NM_144975|SLFN5|162394|schlafen family member 5##AK303632|SLFN5|162394|schlafen family member 5##BX647942|SLFN5|162394|schlafen family member 5##AK054668|SLFN5|162394|schlafen family member 5##AK303299|SLFN5|162394|schlafen family member 5##BC021238|SLFN5|162394|schlafen family member 5##AK097473|SLC35G3|146861|solute carrier family 35, member G3##BC136422|SLC35G3|146861|solute carrier family 35, member G3##BC140700|SLC35G3|146861|solute carrier family 35, member G3##NM_152462|SLC35G3|146861|solute carrier family 35, member G3##AK095929|UNC45B|146862|unc-45 homolog B (C. elegans)##BX647642|UNC45B|146862|unc-45 homolog B (C. elegans)##NM_001033576|UNC45B|146862|unc-45 homolog B (C. elegans)##NM_173167|UNC45B|146862|unc-45 homolog B (C. elegans)##AL832355|UNC45B|146862|unc-45 homolog B (C. elegans)##AL833281|UNC45B|146862|unc-45 homolog B (C. elegans)##AL831964|SLFN11|91607|schlafen family member 11##BC052586|SLFN11|91607|schlafen family member 11##AK092241|SLFN11|91607|schlafen family member 11##NM_001104587|SLFN11|91607|schlafen family member 11##NM_001104588|SLFN11|91607|schlafen family member 11##NM_001104589|SLFN11|91607|schlafen family member 11##NM_001104590|SLFN11|91607|schlafen family member 11##NM_152270|SLFN11|91607|schlafen family member 11##AK001122|SLFN12|55106|schlafen family member 12##BC035605|SLFN12|55106|schlafen family member 12##NM_018042|SLFN12|55106|schlafen family member 12##CR749630|SLFN13|146857|schlafen family member 13##AK056514|SLFN13|146857|schlafen family member 13##AL832726|SLFN13|146857|schlafen family member 13##AK122750|SLFN13|146857|schlafen family member 13##NM_144682|SLFN13|146857|schlafen family member 13	0.974104	CTCF.p2:-18:0.974
chr7	98375168	98375273	reg1005675.p1	13.092	+	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	-128484	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-344787	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-344926	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	92310	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	92407	-	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	92456	-	NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130	0.99777	CTCF.p2:-2:0.998
chr19	55020622	55020777	reg1006257.p1	13.091	+	NM_002288 NM_021270 BC057790 AF013250 BC069366 CU686777 HQ448404 EF174570	-6626	+	BC065910 TSC_hg19_v1_chr19_-_54984370 BC024327 NM_145057	-36318	-	BC015921 NM_198988	-45806	-	AK310088 TSC_hg19_v1_chr19_+_55084486	63786	+	TSC_hg19_v1_chr19_+_55085256 NM_001130917 NM_006866 U82275 AK130170	64553	+	TSC_hg19_v1_chr19_+_55085279 U70665 BC017412 AK222651 AF025531 U82276 BC027916 EU915609 EU915610 CU675976 AF041034 U82277 U82278	64610	+	NM_002288|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##NM_021270|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##BC057790|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##AF013250|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##BC069366|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##HQ448404|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##EF174570|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##BC065910|CDC42EP5|148170|CDC42 effector protein (Rho GTPase binding) 5##BC024327|CDC42EP5|148170|CDC42 effector protein (Rho GTPase binding) 5##NM_145057|CDC42EP5|148170|CDC42 effector protein (Rho GTPase binding) 5##BC015921|LENG9|94059|leukocyte receptor cluster (LRC) member 9##NM_198988|LENG9|94059|leukocyte receptor cluster (LRC) member 9##AK310088|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_001130917|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_006866|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82275|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AK130170|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U70665|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC017412|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AK222651|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AF025531|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82276|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC027916|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##EU915609|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##EU915610|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82277|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82278|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2	0.997013	CTCF.p2:8:0.997
chr3	33116062	33116190	reg1004745.p1	13.091	+	BC071751 NM_005508 AK292674	-123026	+	DQ232881 NM_001039111	-256617	+	TSC_hg19_v1_chr3_+_32726700 AK023227 AK022952 NM_015442 AK309670 BC006382 BC002931 BC002928 AK297085 AK298693 CU678296 CU678298 DQ892895 DQ896143 EU831494 EU831581	-389321	+	TSC_hg19_v1_chr3_-_33138279 AK300021 AK126979 AK128242 NM_001039770 NM_001136238	22144	-	NM_001079811 TSC_hg19_v1_chr3_-_33138315	22207	-	BT007147 CU675671 DQ890689 DQ893871 TSC_hg19_v1_chr3_-_33138590	22457	-	BC071751|CCR4|1233|chemokine (C-C motif) receptor 4##NM_005508|CCR4|1233|chemokine (C-C motif) receptor 4##AK292674|CCR4|1233|chemokine (C-C motif) receptor 4##DQ232881|TRIM71|131405|tripartite motif containing 71##NM_001039111|TRIM71|131405|tripartite motif containing 71##AK023227|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK022952|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##NM_015442|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK309670|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC006382|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002931|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002928|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK297085|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK298693|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ892895|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ896143|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831494|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831581|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK300021|GLB1|2720|galactosidase, beta 1##AK126979|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##AK128242|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001039770|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001136238|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001079811|GLB1|2720|galactosidase, beta 1##BT007147|GLB1|2720|galactosidase, beta 1##DQ890689|GLB1|2720|galactosidase, beta 1##DQ893871|GLB1|2720|galactosidase, beta 1	0.999569	CTCF.p2:15:1.000
chr2	31085046	31085149	reg1004675.p1	13.090	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	-54804	-	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	-414949	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-630595	+	AK122747 NM_001253827	267400	-	AY358758 AK225808 TSC_hg19_v1_chr2_-_31361308	276201	-	TSC_hg19_v1_chr2_-_31361366 AK024039	276269	-	BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AY358758|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AK225808|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.520412	CTCF.p2:0:0.326
chr3	152242451	152242581	reg1004694.p2	13.090	+	AY358260 NM_001123228	-183738	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-225323	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	-255171	-	NM_002563 Z49205	310219	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	637510	+	TSC_hg19_v1_chr3_+_152880058 BC012362	637532	+	AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family	0.287349	CTCF.p2:11:0.287
chr10	58583768	58583897	reg1004104.p2	13.089	+	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	-462806	-	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	-462818	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	-1225058	+	TSC_hg19_v1_chr10_-_60027655 BC016612 BC065709 NM_152230	1443829	-	BC005962 TSC_hg19_v1_chr10_+_60028929 NM_018464 BC059168 AF220049 BC008474 BC007043 AY960578 AK312017	1445114	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	1511004	+	AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##BC016612|IPMK|253430|inositol polyphosphate multikinase##BC065709|IPMK|253430|inositol polyphosphate multikinase##NM_152230|IPMK|253430|inositol polyphosphate multikinase##BC005962|CISD1|55847|CDGSH iron sulfur domain 1##NM_018464|CISD1|55847|CDGSH iron sulfur domain 1##BC059168|CISD1|55847|CDGSH iron sulfur domain 1##AF220049|CISD1|55847|CDGSH iron sulfur domain 1##BC008474|CISD1|55847|CDGSH iron sulfur domain 1##BC007043|CISD1|55847|CDGSH iron sulfur domain 1##AY960578|CISD1|55847|CDGSH iron sulfur domain 1##AK312017|CISD1|55847|CDGSH iron sulfur domain 1##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	0.721574	CTCF.p2:9:0.722
chr17	79988459	79988584	reg1005694.p1	13.089	+	TSC_hg19_v1_chr17_+_79981196 BC014109 NM_144999	-7288	+	TSC_hg19_v1_chr17_-_79980755 BC011610 U95006 U95007 BC009571 NM_144998	-7790	-	TSC_hg19_v1_chr17_+_79935513 AF324219 AK290624 AK057851 BC018722 CU676290 DQ892522 DQ895734 AK226086	-52999	+	TSC_hg19_v1_chr17_+_79989582 BC009605 BC015197 NM_005052 AF008591 AB528368 DQ893123 DQ896400 CU679415 AF498966 BT019443	1040	+	BC003018 AB013846 AF515623 AF515624 AF515625 BT006881 BC001470 AF113123 AF139841 AK226040 NM_001195218 NM_016286 TSC_hg19_v1_chr17_-_79995574	7048	-	AK094016 AX748413 TSC_hg19_v1_chr17_-_80009293	20746	-	BC014109|LRRC45|201255|leucine rich repeat containing 45##NM_144999|LRRC45|201255|leucine rich repeat containing 45##BC011610|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##U95006|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##U95007|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##BC009571|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##NM_144998|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##AF324219|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK290624|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK057851|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##BC018722|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##DQ892522|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##DQ895734|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK226086|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##BC009605|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##BC015197|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##NM_005052|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##AF008591|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##DQ893123|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##DQ896400|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##AF498966|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##BT019443|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##BC003018|DCXR|51181|dicarbonyl/L-xylulose reductase##AB013846|DCXR|51181|dicarbonyl/L-xylulose reductase##AF515623|DCXR|51181|dicarbonyl/L-xylulose reductase##AF515624|DCXR|51181|dicarbonyl/L-xylulose reductase##AF515625|DCXR|51181|dicarbonyl/L-xylulose reductase##BT006881|DCXR|51181|dicarbonyl/L-xylulose reductase##BC001470|DCXR|51181|dicarbonyl/L-xylulose reductase##AF113123|DCXR|51181|dicarbonyl/L-xylulose reductase##AF139841|DCXR|51181|dicarbonyl/L-xylulose reductase##AK226040|DCXR|51181|dicarbonyl/L-xylulose reductase##NM_001195218|DCXR|51181|dicarbonyl/L-xylulose reductase##NM_016286|DCXR|51181|dicarbonyl/L-xylulose reductase##AK094016|RFNG|5986|RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	0.0	
chr1	115522055	115522186	reg1005856.p1	13.088	+	NM_003176 BC026162 AK315268 AF273043 BC105299 BC126266 BC144019 BC144020 BC065190 X95654	-124608	+	TSC_hg19_v1_chr1_-_115323268 BC005934 AK024821 AK225734 CR749219 CR936771 AK126316 NM_001102396 NM_025073	-198825	-	AB590611 EU832701 TSC_hg19_v1_chr1_-_115323253	-198879	-	NM_000549	50294	+	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	109996	-	BC032517 NM_002506 X52599	358733	-	NM_003176|SYCP1|6847|synaptonemal complex protein 1##BC026162|SYCP1|6847|synaptonemal complex protein 1##AK315268|SYCP1|6847|synaptonemal complex protein 1##AF273043|SYCP1|6847|synaptonemal complex protein 1##BC105299|SYCP1|6847|synaptonemal complex protein 1##BC126266|SYCP1|6847|synaptonemal complex protein 1##BC144019|SYCP1|6847|synaptonemal complex protein 1##BC144020|SYCP1|6847|synaptonemal complex protein 1##BC065190|SYCP1|6847|synaptonemal complex protein 1##X95654|SYCP1|6847|synaptonemal complex protein 1##BC005934|SIKE1|80143|suppressor of IKBKE 1##AK024821|SIKE1|80143|suppressor of IKBKE 1##AK225734|SIKE1|80143|suppressor of IKBKE 1##CR749219|SIKE1|80143|suppressor of IKBKE 1##CR936771|SIKE1|80143|suppressor of IKBKE 1##AK126316|SIKE1|80143|suppressor of IKBKE 1##NM_001102396|SIKE1|80143|suppressor of IKBKE 1##NM_025073|SIKE1|80143|suppressor of IKBKE 1##EU832701|SIKE1|80143|suppressor of IKBKE 1##NM_000549|TSHB|7252|thyroid stimulating hormone, beta##AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)	0.980438	CTCF.p2:-8:0.980
chr3	149939151	149939287	reg1006339.p1	13.087	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-250139	+	TSC_hg19_v1_chr3_-_149688960 BC043646	-250290	-	TSC_hg19_v1_chr3_-_149688683 AB464068 AF228738 EU832616 EU832688 AK311782 L10678 BC002964 BC095444 AK307227 AK311780 BC018049 AK297915 NM_002628 NM_053024	-250523	-	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	186853	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	187544	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	324751	-	BC012363|LOC646903|646903|uncharacterized LOC646903##BC043646|PFN2|5217|profilin 2##AF228738|PFN2|5217|profilin 2##EU832616|PFN2|5217|profilin 2##EU832688|PFN2|5217|profilin 2##AK311782|PFN2|5217|profilin 2##L10678|PFN2|5217|profilin 2##BC002964|PFN2|5217|profilin 2##BC095444|PFN2|5217|profilin 2##AK307227|PFN2|5217|profilin 2##AK311780|PFN2|5217|profilin 2##BC018049|PFN2|5217|profilin 2##AK297915|PFN2|5217|profilin 2##NM_002628|PFN2|5217|profilin 2##NM_053024|PFN2|5217|profilin 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.961534	CTCF.p2:8:0.962
chr10	64843773	64843905	reg1005794.p1	13.085	+	AK312813 NM_001136178	-264913	-	TSC_hg19_v1_chr10_-_64576127 NM_000399 NM_001136177 NM_001136179	-267692	-	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	-267742	-	TSC_hg19_v1_chr10_+_64893044 NM_030759 AK054957 AL136656	49192	+	TSC_hg19_v1_chr10_+_64893098 AF267866 AK301656 AK225257 AK225256 AY267839 AY267840 BC011707 AB590768 EU832288 EU832373	49307	+	BC126403 BC143722 TSC_hg19_v1_chr10_-_65029004 BX537954 NM_004241 BC108649	185076	-	AK312813|EGR2|1959|early growth response 2##NM_001136178|EGR2|1959|early growth response 2##NM_000399|EGR2|1959|early growth response 2##NM_001136177|EGR2|1959|early growth response 2##NM_001136179|EGR2|1959|early growth response 2##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2##NM_030759|NRBF2|29982|nuclear receptor binding factor 2##AK054957|NRBF2|29982|nuclear receptor binding factor 2##AL136656|NRBF2|29982|nuclear receptor binding factor 2##AF267866|NRBF2|29982|nuclear receptor binding factor 2##AK301656|NRBF2|29982|nuclear receptor binding factor 2##AK225257|NRBF2|29982|nuclear receptor binding factor 2##AK225256|NRBF2|29982|nuclear receptor binding factor 2##AY267839|NRBF2|29982|nuclear receptor binding factor 2##AY267840|NRBF2|29982|nuclear receptor binding factor 2##BC011707|NRBF2|29982|nuclear receptor binding factor 2##EU832288|NRBF2|29982|nuclear receptor binding factor 2##EU832373|NRBF2|29982|nuclear receptor binding factor 2##BC126403|JMJD1C|221037|jumonji domain containing 1C##BC143722|JMJD1C|221037|jumonji domain containing 1C##BX537954|JMJD1C|221037|jumonji domain containing 1C##NM_004241|JMJD1C|221037|jumonji domain containing 1C##BC108649|JMJD1C|221037|jumonji domain containing 1C	0.0	
chr20	61075370	61075488	reg1004937.p1	13.085	+	BC047790 NM_080473 TSC_hg19_v1_chr20_-_61051052	-24391	-	AK074919 TSC_hg19_v1_chr20_-_61002592 AK290299 NM_080833	-72821	-	TSC_hg19_v1_chr20_-_60982342 NM_031215	-93085	-	AK056985 NM_178463	72230	+	TSC_hg19_v1_chr20_+_61147924 BC110595	72525	+	TSC_hg19_v1_chr20_+_61273818 NM_016354	198374	+	BC047790|GATA5|140628|GATA binding protein 5##NM_080473|GATA5|140628|GATA binding protein 5##AK074919|C20orf151|140893|chromosome 20 open reading frame 151##AK290299|C20orf151|140893|chromosome 20 open reading frame 151##NM_080833|C20orf151|140893|chromosome 20 open reading frame 151##NM_031215|CABLES2|81928|Cdk5 and Abl enzyme substrate 2##AK056985|C20orf166|128826|chromosome 20 open reading frame 166##NM_178463|C20orf166|128826|chromosome 20 open reading frame 166##BC110595|C20orf166|128826|chromosome 20 open reading frame 166##NM_016354|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1	0.90453	CTCF.p2:-22:0.905
chr17	49027781	49027944	reg1007161.p1	13.084	+	AK313904 NM_001243877	-82524	-	TSC_hg19_v1_chr17_-_48943716 BC070493 BC098415 NM_001243885 NM_005749	-84166	-	NM_175575	-115258	+	TSC_hg19_v1_chr17_-_49124138 BC007524 BC059946 AK299553 AK307793 AK295098 AK309214 AK024068 NM_001251971	96366	-	TSC_hg19_v1_chr17_-_49198227 AF327452 BC106048 AK302789 AY850123 AB011088 BC146755 BC153878 AK091921 AX747254 NM_001130527 NM_001130528 NM_003971	170293	-	NM_001018136 TSC_hg19_v1_chr17_+_49230927 AK291105 NM_000269 NM_198175	203049	+	AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1##BC070493|TOB1|10140|transducer of ERBB2, 1##BC098415|TOB1|10140|transducer of ERBB2, 1##NM_001243885|TOB1|10140|transducer of ERBB2, 1##NM_005749|TOB1|10140|transducer of ERBB2, 1##NM_175575|WFIKKN2|124857|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2##BC007524|SPAG9|9043|sperm associated antigen 9##BC059946|SPAG9|9043|sperm associated antigen 9##AK299553|SPAG9|9043|sperm associated antigen 9##AK307793|SPAG9|9043|sperm associated antigen 9##AK295098|SPAG9|9043|sperm associated antigen 9##AK309214|SPAG9|9043|sperm associated antigen 9##AK024068|SPAG9|9043|sperm associated antigen 9##NM_001251971|SPAG9|9043|sperm associated antigen 9##AF327452|SPAG9|9043|sperm associated antigen 9##AK302789|SPAG9|9043|sperm associated antigen 9##AY850123|SPAG9|9043|sperm associated antigen 9##AB011088|SPAG9|9043|sperm associated antigen 9##BC146755|SPAG9|9043|sperm associated antigen 9##BC153878|SPAG9|9043|sperm associated antigen 9##AK091921|SPAG9|9043|sperm associated antigen 9##NM_001130527|SPAG9|9043|sperm associated antigen 9##NM_001130528|SPAG9|9043|sperm associated antigen 9##NM_003971|SPAG9|9043|sperm associated antigen 9##NM_001018136|NME1-NME2|654364|NME1-NME2 readthrough##AK291105|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_000269|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_198175|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in	0.608244	CTCF.p2:9:0.608
chr10	84556406	84556528	reg1006091.p1	13.082	+	DQ857894 NM_001165973	-919025	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-921385	+	AK123978 NM_001145719	-2255893	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	1342790	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	1375325	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	1377092	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.078272	
chr2	96688589	96688709	reg1005949.p1	13.081	+	TSC_hg19_v1_chr2_+_96676311 BC015216	-12325	+	TSC_hg19_v1_chr2_-_96657677 AK302433	-31027	-	TSC_hg19_v1_chr2_-_96482383 BC117383 BC126153 AK057596	-206204	-	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	12045	-	NM_000682 AB527942 BC133021 BC136537	93286	-	BC107126 AJ537600 BC107127 NM_001002036	115524	-	AK302433|ANKRD36C|400986|ankyrin repeat domain 36C##AK057596|LINC00342|150759|long intergenic non-protein coding RNA 342##BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)	0.997992	CTCF.p2:-7:0.998
chr9	95766109	95766255	reg1007167.p1	13.081	+	NM_033086 BX647829 BC111054 AY211386	-29433	+	NM_001083536	-56582	+	AK299274 TSC_hg19_v1_chr9_-_95640325 AK091203 AX746846 NM_001007101 AL833202 NM_031486 AK292997 AK309617	-125905	-	TSC_hg19_v1_chr9_+_95820982 BC014601 NM_145006	54794	+	TSC_hg19_v1_chr9_+_95821007 CU677063 DQ894024 EU176188 AY358190	54842	+	NM_032310 TSC_hg19_v1_chr9_+_95858498 AK057716 AK091611 AX747094 BC042201 BC038856 BC004500	92298	+	NM_033086|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BX647829|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BC111054|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AY211386|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##NM_001083536|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AK299274|ZNF484|83744|zinc finger protein 484##AK091203|ZNF484|83744|zinc finger protein 484##NM_001007101|ZNF484|83744|zinc finger protein 484##AL833202|ZNF484|83744|zinc finger protein 484##NM_031486|ZNF484|83744|zinc finger protein 484##AK292997|ZNF484|83744|zinc finger protein 484##AK309617|ZNF484|83744|zinc finger protein 484##BC014601|SUSD3|203328|sushi domain containing 3##NM_145006|SUSD3|203328|sushi domain containing 3##DQ894024|SUSD3|203328|sushi domain containing 3##EU176188|SUSD3|203328|sushi domain containing 3##AY358190|SUSD3|203328|sushi domain containing 3##NM_032310|C9orf89|84270|chromosome 9 open reading frame 89##AK057716|C9orf89|84270|chromosome 9 open reading frame 89##AK091611|C9orf89|84270|chromosome 9 open reading frame 89##BC042201|C9orf89|84270|chromosome 9 open reading frame 89##BC038856|C9orf89|84270|chromosome 9 open reading frame 89##BC004500|C9orf89|84270|chromosome 9 open reading frame 89	0.908541	CTCF.p2:-8:0.909
chr1	17029766	17029904	reg1007136.p1	13.080	+	AK123337 TSC_hg19_v1_chr1_-_16971178	-58658	-	TSC_hg19_v1_chr1_-_16971175 AK090414	-58669	-	TSC_hg19_v1_chr1_-_16940046 AK123260 AY894575 NM_017940 BC066930 BC010124 BC082236 BC110431 AK055895 BC093404	-89939	-	TSC_hg19_v1_chr1_+_17248425 NM_014675	218599	+	TSC_hg19_v1_chr1_-_17307116 BC028033 AK222751 BC015039 NM_001135248 NM_002403	277314	-	AK301655 NM_001135247 NM_017459	278241	-	AK123337|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK123260|NBPF1|55672|neuroblastoma breakpoint family, member 1##AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_017940|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC066930|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC010124|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC110431|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK055895|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC093404|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_014675|CROCC|9696|ciliary rootlet coiled-coil, rootletin##BC028033|MFAP2|4237|microfibrillar-associated protein 2##AK222751|MFAP2|4237|microfibrillar-associated protein 2##BC015039|MFAP2|4237|microfibrillar-associated protein 2##NM_001135248|MFAP2|4237|microfibrillar-associated protein 2##NM_002403|MFAP2|4237|microfibrillar-associated protein 2##AK301655|MFAP2|4237|microfibrillar-associated protein 2##NM_001135247|MFAP2|4237|microfibrillar-associated protein 2##NM_017459|MFAP2|4237|microfibrillar-associated protein 2	0.969921	CTCF.p2:-9:0.970
chr17	45920543	45920663	reg1004271.p1	13.079	+	TSC_hg19_v1_chr17_-_45918640 BC002980 AK303835 NM_001145023 NM_138355	-1934	-	TSC_hg19_v1_chr17_-_45918622 AK290646 BC017317 BC010408 AK308989	-2008	-	AK315665 NM_033413 AK292765 AK027206 BC010412	-11558	+	TSC_hg19_v1_chr17_-_45928530 AK127707	7941	-	BC103951 BC103952 BC103953 BC103954 AK127850 NM_199262	12585	-	TSC_hg19_v1_chr17_-_45973143 AK127217	52547	-	BC002980|SCRN2|90507|secernin 2##AK303835|SCRN2|90507|secernin 2##NM_001145023|SCRN2|90507|secernin 2##NM_138355|SCRN2|90507|secernin 2##AK290646|SCRN2|90507|secernin 2##BC017317|SCRN2|90507|secernin 2##BC010408|SCRN2|90507|secernin 2##AK308989|SCRN2|90507|secernin 2##AK315665|LRRC46|90506|leucine rich repeat containing 46##NM_033413|LRRC46|90506|leucine rich repeat containing 46##AK292765|LRRC46|90506|leucine rich repeat containing 46##AK027206|LRRC46|90506|leucine rich repeat containing 46##BC010412|LRRC46|90506|leucine rich repeat containing 46##AK127707|SP6|80320|Sp6 transcription factor##BC103951|SP6|80320|Sp6 transcription factor##BC103952|SP6|80320|Sp6 transcription factor##BC103953|SP6|80320|Sp6 transcription factor##BC103954|SP6|80320|Sp6 transcription factor##AK127850|SP6|80320|Sp6 transcription factor##NM_199262|SP6|80320|Sp6 transcription factor	0.0	
chr18	60798462	60798600	reg1003938.p1	13.079	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-2596	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-414223	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-414605	+	BC027258 NM_000633 NM_000657	188029	-	TSC_hg19_v1_chr18_-_60986977 X06487	188462	-	TSC_hg19_v1_chr18_-_60987309 M13994	188755	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.983224	CTCF.p2:2:0.983
chr3	50690305	50690433	reg1004864.p2	13.079	+	TSC_hg19_v1_chr3_+_50654932 AK313565 U43784 AB528893 EU832627 EU832702 CU675717 AB451303 AB451434	-35437	+	BC001662 BC010407 TSC_hg19_v1_chr3_+_50654611 BC007591 U09578	-35742	+	TSC_hg19_v1_chr3_+_50654595 AK290969	-35777	+	AY254099 NM_004947 AY145303	22313	+	NM_006010 TSC_hg19_v1_chr3_+_51422691	732322	+	TSC_hg19_v1_chr3_+_51422721 BC113588 BC113590 AK292243 BC007282 BT007110 EU832655 EU832733 BC033055	732412	+	AK313565|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U43784|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832627|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832702|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451303|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451434|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC001662|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC010407|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC007591|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U09578|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AK290969|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AY254099|DOCK3|1795|dedicator of cytokinesis 3##NM_004947|DOCK3|1795|dedicator of cytokinesis 3##AY145303|DOCK3|1795|dedicator of cytokinesis 3##NM_006010|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113588|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113590|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AK292243|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC007282|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BT007110|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832655|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832733|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC033055|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor	1.125787	CTCF.p2:11:0.980
chr8	146095198	146095300	reg1004720.p1	13.079	+	TSC_hg19_v1_chr8_-_146078881 NM_001081003	-16348	-	TSC_hg19_v1_chr8_-_146078452 NM_001081004 NM_014066	-16799	-	TSC_hg19_v1_chr8_-_146078434 AK001477 BC002672	-16821	-	TSC_hg19_v1_chr8_-_146126839 AK294282 BX648173 AK095705 AB208810 BC017091 AK054888 NM_001109689 NM_021061 BC107579	31570	-	TSC_hg19_v1_chr8_-_146176267 BC010996 AK226016 AK096815 AK127625 DQ117529 NM_001029976 NM_006958	80998	-	AK128723 TSC_hg19_v1_chr8_-_146202735	107483	-	NM_001081003|COMMD5|28991|COMM domain containing 5##NM_001081004|COMMD5|28991|COMM domain containing 5##NM_014066|COMMD5|28991|COMM domain containing 5##AK001477|COMMD5|28991|COMM domain containing 5##BC002672|COMMD5|28991|COMM domain containing 5##AK294282|ZNF250|58500|zinc finger protein 250##BX648173|ZNF250|58500|zinc finger protein 250##AK095705|ZNF250|58500|zinc finger protein 250##AB208810|ZNF250|58500|zinc finger protein 250##BC017091|ZNF250|58500|zinc finger protein 250##AK054888|ZNF250|58500|zinc finger protein 250##NM_001109689|ZNF250|58500|zinc finger protein 250##NM_021061|ZNF250|58500|zinc finger protein 250##BC107579|ZNF250|58500|zinc finger protein 250##BC010996|ZNF16|7564|zinc finger protein 16##AK226016|ZNF16|7564|zinc finger protein 16##AK096815|ZNF16|7564|zinc finger protein 16##AK127625|ZNF16|7564|zinc finger protein 16##DQ117529|ZNF16|7564|zinc finger protein 16##NM_001029976|ZNF16|7564|zinc finger protein 16##NM_006958|ZNF16|7564|zinc finger protein 16##AK128723|ZNF252|286101|zinc finger protein 252	0.830068	CTCF.p2:-12:0.830
chr17	40669588	40669735	reg1006624.p1	13.078	+	TSC_hg19_v1_chr17_+_40610941 AK295682	-58710	+	TSC_hg19_v1_chr17_+_40610920 CR627443 BC032398	-58735	+	AK294512 TSC_hg19_v1_chr17_+_40610908	-58753	+	NM_000263	18289	+	U40846 TSC_hg19_v1_chr17_+_40688258	18563	+	TSC_hg19_v1_chr17_+_40688278 BC053991 L78464 U43573	18616	+	AK295682|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##CR627443|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##BC032398|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK294512|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_000263|NAGLU|4669|N-acetylglucosaminidase, alpha##U40846|NAGLU|4669|N-acetylglucosaminidase, alpha##BC053991|NAGLU|4669|N-acetylglucosaminidase, alpha##L78464|NAGLU|4669|N-acetylglucosaminidase, alpha##U43573|NAGLU|4669|N-acetylglucosaminidase, alpha	0.981469	CTCF.p2:-4:0.981
chr2	38693012	38693138	reg1005753.p1	13.078	+	TSC_hg19_v1_chr2_-_38604430 NM_001135673 NM_022374	-88644	-	TSC_hg19_v1_chr2_-_38604411 BC053508 AK026946 AK225190 AK303985 AK308894	-88671	-	AK316179 TSC_hg19_v1_chr2_-_38525609	-167506	-	TSC_hg19_v1_chr2_-_38829619 CU675994	136616	-	TSC_hg19_v1_chr2_-_38830012 AY236962	136917	-	TSC_hg19_v1_chr2_-_38830065 AY236963 BC017480 AK291462	136965	-	NM_001135673|ATL2|64225|atlastin GTPase 2##NM_022374|ATL2|64225|atlastin GTPase 2##BC053508|ATL2|64225|atlastin GTPase 2##AK026946|ATL2|64225|atlastin GTPase 2##AK225190|ATL2|64225|atlastin GTPase 2##AK303985|ATL2|64225|atlastin GTPase 2##AK308894|ATL2|64225|atlastin GTPase 2##AK316179|ATL2|64225|atlastin GTPase 2##AY236962|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	0.928746	CTCF.p2:16:0.929
chr5	108017129	108017257	reg1004139.p1	13.078	+	BC063316 NM_001163315	-299395	-	TSC_hg19_v1_chr5_-_107717106 AK126722	-300063	-	AK308672 NM_001962 U26403	-1010603	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	46787	-	AK293376 J03358 NM_005246 AK296874	66369	+	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	67479	+	BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AB593118|HP07349|100652853|uncharacterized protein HP07349##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase	0.0	
chr6	73890861	73890993	reg1006266.p1	13.078	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	-558866	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	-559038	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	-559357	+	BC004267 NM_001126063	44247	-	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	81939	-	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	82046	+	AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC004267|KHDC1L|100129128|KH homology domain containing 1-like##NM_001126063|KHDC1L|100129128|KH homology domain containing 1-like##BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1	0.447427	CTCF.p2:11:0.447
chr1	159181454	159181569	reg1004280.p2	13.077	+	NM_001122951 U01839	-6463	+	AK291593 NM_002036	-7709	+	AK289541 NM_021189 TSC_hg19_v1_chr1_+_159141404 AK308915 NM_001127173 AF363367 AY358332 AF062733 BC033819 AY046418 AF529206 DQ890848 DQ894002	-40046	+	NM_002001 X06948	77992	+	AB529279 NM_001004467	102937	-	BC112290 BC112292 NM_012351 BC069150	228018	+	NM_001122951|DARC|2532|Duffy blood group, chemokine receptor##U01839|DARC|2532|Duffy blood group, chemokine receptor##AK291593|DARC|2532|Duffy blood group, chemokine receptor##NM_002036|DARC|2532|Duffy blood group, chemokine receptor##AK289541|CADM3|57863|cell adhesion molecule 3##NM_021189|CADM3|57863|cell adhesion molecule 3##AK308915|CADM3|57863|cell adhesion molecule 3##NM_001127173|CADM3|57863|cell adhesion molecule 3##AF363367|CADM3|57863|cell adhesion molecule 3##AY358332|CADM3|57863|cell adhesion molecule 3##AF062733|CADM3|57863|cell adhesion molecule 3##BC033819|CADM3|57863|cell adhesion molecule 3##AY046418|CADM3|57863|cell adhesion molecule 3##AF529206|CADM3|57863|cell adhesion molecule 3##DQ890848|CADM3|57863|cell adhesion molecule 3##DQ894002|CADM3|57863|cell adhesion molecule 3##NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide##X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide##NM_001004467|OR10J3|441911|olfactory receptor, family 10, subfamily J, member 3##BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	0.908138	CTCF.p2:2:0.908
chr1	152025170	152025272	reg1003806.p1	13.076	+	TSC_hg19_v1_chr1_-_152009493 D38583 NM_005620	-15721	-	X80201 TSC_hg19_v1_chr1_-_152009481 BC001410 D49355	-15747	-	TSC_hg19_v1_chr1_-_152009451 AK312184 BC014354	-15771	-	BC137493 AY456639 NM_001008536	36313	-	NM_007113	61334	-	AY396742 NM_001122965	106482	-	D38583|S100A11|6282|S100 calcium binding protein A11##NM_005620|S100A11|6282|S100 calcium binding protein A11##X80201|S100A11|6282|S100 calcium binding protein A11##BC001410|S100A11|6282|S100 calcium binding protein A11##D49355|S100A11|6282|S100 calcium binding protein A11##AK312184|S100A11|6282|S100 calcium binding protein A11##BC014354|S100A11|6282|S100 calcium binding protein A11##BC137493|TCHHL1|126637|trichohyalin-like 1##AY456639|TCHHL1|126637|trichohyalin-like 1##NM_001008536|TCHHL1|126637|trichohyalin-like 1##NM_007113|TCHH|7062|trichohyalin##AY396742|RPTN|126638|repetin##NM_001122965|RPTN|126638|repetin	0.998228	CTCF.p2:-2:0.998
chr16	22200010	22200154	reg1003883.p1	13.076	+	AK098260 AK128606 AK307544 NM_173615	-96221	+	TSC_hg19_v1_chr16_+_22019464 NM_001164579 BC027604 BC053950	-180594	+	BC039562 BC021724 BC028605 NM_173806	-187654	-	TSC_hg19_v1_chr16_+_22217630 NM_013302 AK308757 BC032665	17591	+	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	108666	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	185713	-	AK098260|VWA3A|146177|von Willebrand factor A domain containing 3A##AK128606|VWA3A|146177|von Willebrand factor A domain containing 3A##AK307544|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_173615|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_001164579|C16orf52|730094|chromosome 16 open reading frame 52##BC027604|C16orf52|730094|chromosome 16 open reading frame 52##BC053950|C16orf52|730094|chromosome 16 open reading frame 52##BC039562|PDZD9|255762|PDZ domain containing 9##BC021724|PDZD9|255762|PDZ domain containing 9##BC028605|PDZD9|255762|PDZ domain containing 9##NM_173806|PDZD9|255762|PDZ domain containing 9##NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase##BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	0.997781	CTCF.p2:7:0.998
chr4	185667045	185667174	reg1006173.p1	13.076	+	DQ907910 DQ907911 TSC_hg19_v1_chr4_-_185655244 BC067802 AK292297 BC141854 AF469667 BC131556 NM_024629	-11856	-	TSC_hg19_v1_chr4_+_185570923 BC064600 AK307317	-96180	+	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	-96276	+	TSC_hg19_v1_chr4_-_185726866 AK296826	59794	-	TSC_hg19_v1_chr4_-_185747123 L09229 AK292798	79992	-	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	80125	-	DQ907910|MLF1IP|79682|MLF1 interacting protein##DQ907911|MLF1IP|79682|MLF1 interacting protein##BC067802|MLF1IP|79682|MLF1 interacting protein##AK292297|MLF1IP|79682|MLF1 interacting protein##BC141854|MLF1IP|79682|MLF1 interacting protein##AF469667|MLF1IP|79682|MLF1 interacting protein##BC131556|MLF1IP|79682|MLF1 interacting protein##NM_024629|MLF1IP|79682|MLF1 interacting protein##BC064600|CCDC111|201973|coiled-coil domain containing 111##AK307317|CCDC111|201973|coiled-coil domain containing 111##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111##AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##L09229|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK292798|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1	0.96501	CTCF.p2:-11:0.965
chr5	71662320	71662456	reg1004747.p1	13.076	+	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-46166	+	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	-46186	+	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	-46308	-	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	140795	-	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	450102	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	481553	+	BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1	0.32812	CTCF.p2:-1:0.328
chr2	203438702	203438809	reg1004776.p2	13.073	+	TSC_hg19_v1_chr2_+_203241049 NM_001204	-197709	+	TSC_hg19_v1_chr2_+_203130493 BC018805 BC009306 BC032592 NM_015934 DQ890868 EU176490 AB528451 CU689436 AF123534 AF263608	-308183	+	TSC_hg19_v1_chr2_+_203130458 AK300844 AK307396 AL117554 BC001707	-308299	+	TSC_hg19_v1_chr2_+_203499703 AK096090	60934	+	TSC_hg19_v1_chr2_+_203499820 NM_173511	61104	+	AB053315 TSC_hg19_v1_chr2_+_203500263	61482	+	NM_001204|BMPR2|659|bone morphogenetic protein receptor, type II (serine/threonine kinase)##BC018805|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC009306|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC032592|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##NM_015934|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##DQ890868|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##EU176490|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AF123534|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AF263608|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK300844|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK307396|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AL117554|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC001707|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK096090|FAM117B|150864|family with sequence similarity 117, member B##NM_173511|FAM117B|150864|family with sequence similarity 117, member B##AB053315|FAM117B|150864|family with sequence similarity 117, member B	0.983707	CTCF.p2:-2:0.984
chr1	179090377	179090496	reg1005281.p1	13.072	+	TSC_hg19_v1_chr1_+_179051236 BC011746 AK316530 AK299966 CU675711 CU676228 CR457354	-39188	+	BC088368 BC001085 TSC_hg19_v1_chr1_+_179051232 BC018292 AJ299403 AJ299441 BC007571 AK025998	-39211	+	NM_022371 TSC_hg19_v1_chr1_+_179051147	-39302	+	FJ542283 BC065912 AK225255 TSC_hg19_v1_chr1_-_179112210 AK309549 NM_001136000 NM_001168239 NM_005158	21764	-	M35296 TSC_hg19_v1_chr1_-_179198813	108338	-	TSC_hg19_v1_chr1_-_179198815 AK311045 NM_001136001 NM_001168236 NM_001168237 NM_001168238 NM_007314	108383	-	BC011746|TOR3A|64222|torsin family 3, member A##AK316530|TOR3A|64222|torsin family 3, member A##AK299966|TOR3A|64222|torsin family 3, member A##CR457354|TOR3A|64222|torsin family 3, member A##BC088368|TOR3A|64222|torsin family 3, member A##BC001085|TOR3A|64222|torsin family 3, member A##BC018292|TOR3A|64222|torsin family 3, member A##AJ299403|TOR3A|64222|torsin family 3, member A##AJ299441|TOR3A|64222|torsin family 3, member A##BC007571|TOR3A|64222|torsin family 3, member A##AK025998|TOR3A|64222|torsin family 3, member A##NM_022371|TOR3A|64222|torsin family 3, member A##FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##M35296|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK311045|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001136001|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168236|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168237|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168238|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_007314|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	0.672423	CTCF.p2:-21:0.672
chr19	54770043	54770177	reg1005905.p1	13.072	+	DQ894102 AK090399 AF025534 AK057072 BC025704 AK223296 AK301112 AK096122 AK301338 AK092867 AK290845 NM_001081442 NM_001081443 NM_006840	-8999	-	AF000575 EU814627 EU814628 AF009632 AF009633 AF009634 AF009635 AF009636 AF009637 AF009638 AF009639 AF009640 AF009641 AF009642 AF009643 AF009644 AF031553 AF031554 AF031555 AF031556 BC028153 AB463830 BC041708 BC104993 BC112198 EU915603 EU915604 EU915605 U91928 AK223265 AF025533 NM_024318	-23449	-	AK290917 NM_001081450 NM_006864	-43168	-	BC036827 AF283986 AF025528 BC025766 TSC_hg19_v1_chr19_-_54784966 AK297071 AK226015 AK297041 NM_001080978 NM_005874	14867	-	AF014923 AF014924 AF041262 CU688428 DQ891075 DQ894258 AB590305 NM_001172654 U91926 BC028208 AF025527 NM_006865 TSC_hg19_v1_chr19_-_54804279	34127	-	AF499917 EU915611 EU915612 AF499916 AF499919 AF499918 AF324830 NM_021250 NM_181879 NM_181985 NM_181986	54265	-	DQ894102|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK090399|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AF025534|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK057072|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##BC025704|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK223296|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK301112|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK096122|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK301338|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK092867|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK290845|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##NM_001081442|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##NM_001081443|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##NM_006840|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AF000575|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##EU814627|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##EU814628|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009632|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009633|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009634|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009635|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009636|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009637|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009638|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009639|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009640|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009641|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009642|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009643|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF009644|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF031553|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF031554|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF031555|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF031556|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##BC028153|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##BC041708|LILRA6|79168|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6##BC104993|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##BC112198|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##EU915603|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##EU915604|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##EU915605|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##U91928|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AK223265|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##AF025533|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##NM_024318|LILRA6|79168|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6##AK290917|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##NM_001081450|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##NM_006864|LILRB3|11025|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3##BC036827|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AF283986|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AF025528|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##BC025766|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK297071|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK226015|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK297041|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##NM_001080978|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##NM_005874|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AF014923|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF014924|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF041262|LILRA6|79168|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6##DQ891075|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##DQ894258|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##NM_001172654|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##U91926|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##BC028208|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF025527|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##NM_006865|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF499917|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##EU915611|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##EU915612|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499916|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499919|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499918|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF324830|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_021250|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181879|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181985|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181986|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	0.970072	CTCF.p2:-3:0.970
chr3	49025393	49025503	reg1004583.p1	13.071	+	AK097724 NM_001123040	-68631	-	TSC_hg19_v1_chr3_+_48956280 NM_006321 BC000422	-69165	+	TSC_hg19_v1_chr3_+_48956261 AK223550	-69192	+	TSC_hg19_v1_chr3_+_49027682 BC047566 NM_177938 NM_177939 AL713728 BC011710 AY198406 BC018731	2053	+	BC060321 TSC_hg19_v1_chr3_+_49027877 CU680020 AK000269	2412	+	AK295145 NM_018031 TSC_hg19_v1_chr3_+_49044739	19168	+	AK097724|C3orf71|646450|chromosome 3 open reading frame 71##NM_001123040|C3orf71|646450|chromosome 3 open reading frame 71##NM_006321|ARIH2|10425|ariadne homolog 2 (Drosophila)##BC000422|ARIH2|10425|ariadne homolog 2 (Drosophila)##AK223550|ARIH2|10425|ariadne homolog 2 (Drosophila)##BC047566|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##NM_177938|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##NM_177939|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AL713728|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC011710|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AY198406|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC018731|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC060321|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AK000269|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AK295145|WDR6|11180|WD repeat domain 6##NM_018031|WDR6|11180|WD repeat domain 6	0.662325	CTCF.p2:-2:0.662
chr6	25490426	25490557	reg1005463.p1	13.071	+	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	-210597	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	-210833	+	TSC_hg19_v1_chr6_+_25279316 BC040903	-211173	+	TSC_hg19_v1_chr6_-_25571218 Y10205	80767	-	AK289477 NM_006998 BC000336 BC003036 Y16752	161932	+	CU687518 BC062211 NM_170745	236280	-	BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK289477|SCGN|10590|secretagogin, EF-hand calcium binding protein##NM_006998|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC000336|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC003036|SCGN|10590|secretagogin, EF-hand calcium binding protein##Y16752|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC062211|HIST1H2AA|221613|histone cluster 1, H2aa##NM_170745|HIST1H2AA|221613|histone cluster 1, H2aa	0.626523	CTCF.p2:1:0.627
chr7	137341152	137341269	reg1004767.p1	13.069	+	BC005916 TSC_hg19_v1_chr7_-_137028543 NM_002825 M57399	-312655	-	X52946 TSC_hg19_v1_chr7_-_137028443 AK313424	-312769	-	TSC_hg19_v1_chr7_-_137028371 AK290488	-312837	-	TSC_hg19_v1_chr7_-_137531587 NM_004717	190386	-	TSC_hg19_v1_chr7_+_137531690 BC047556	190522	+	TSC_hg19_v1_chr7_-_137620668 BC015585	279452	-	BC005916|PTN|5764|pleiotrophin##NM_002825|PTN|5764|pleiotrophin##M57399|PTN|5764|pleiotrophin##X52946|PTN|5764|pleiotrophin##AK313424|PTN|5764|pleiotrophin##AK290488|PTN|5764|pleiotrophin##NM_004717|DGKI|9162|diacylglycerol kinase, iota##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.097287	
chr20	30157448	30157587	reg1006345.p1	13.068	+	TSC_hg19_v1_chr20_+_30135200 BC053868	-22283	+	TSC_hg19_v1_chr20_+_30102316 AJ420895 DQ896206 CU687568 AF515663	-55184	+	AF172086 BC062595 TSC_hg19_v1_chr20_+_30102287 AF483215 AJ345029 AK074686	-55236	+	TSC_hg19_v1_chr20_+_30193091 NM_002165 NM_181353 AK313786 BC012420 BC000613 S78986 X77956 AK291152 D13889 D13890 S78825 AB463776 CU680316 DQ891293 DQ893342 DQ894477 DQ896657 EU176458 EU176468 EU176808 BT007443	35619	+	AF257180 NM_032609 BC057779	68185	+	BC032024 TSC_hg19_v1_chr20_-_30288101	130580	-	AJ420895|HM13|81502|histocompatibility (minor) 13##DQ896206|HM13|81502|histocompatibility (minor) 13##AF515663|HM13|81502|histocompatibility (minor) 13##AF172086|HM13|81502|histocompatibility (minor) 13##BC062595|HM13|81502|histocompatibility (minor) 13##AF483215|HM13|81502|histocompatibility (minor) 13##AJ345029|HM13|81502|histocompatibility (minor) 13##AK074686|HM13|81502|histocompatibility (minor) 13##NM_002165|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##NM_181353|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK313786|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC012420|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC000613|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78986|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##X77956|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK291152|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13889|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13890|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78825|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ891293|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ893342|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ894477|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ896657|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176458|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176468|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176808|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BT007443|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AF257180|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_032609|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##BC057779|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)	0.89232	CTCF.p2:-2:0.892
chr3	124070678	124070803	reg1005697.p1	13.068	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-257135	+	AF303889 NM_017578	-360542	-	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	-390485	-	TSC_hg19_v1_chr3_+_124103674 AK131379	32883	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	232788	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	378499	+	AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14##AK131379|KALRN|8997|kalirin, RhoGEF kinase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase	0.981688	CTCF.p2:-17:0.982
chr5	172140154	172140296	reg1006733.p1	13.068	+	AF275799 TSC_hg19_v1_chr5_-_172083715	-56582	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-71972	+	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	-258722	-	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	57986	-	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	121093	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	246223	+	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1	0.998754	CTCF.p2:-15:0.999
chr11	122982236	122982361	reg1005908.p1	13.067	+	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	-49419	-	AB034951 BC016179 BC016660 BC019816 AF352832 TSC_hg19_v1_chr11_-_122932842 AK222628 AK222785 AK096100 AK129885 AK303935	-49474	-	AB231738 NM_001098169	-129942	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	83604	-	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	83707	-	TSC_hg19_v1_chr11_+_123396366 AK127457	414057	+	NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AB034951|HSPA8|3312|heat shock 70kDa protein 8##BC016179|HSPA8|3312|heat shock 70kDa protein 8##BC016660|HSPA8|3312|heat shock 70kDa protein 8##BC019816|HSPA8|3312|heat shock 70kDa protein 8##AF352832|HSPA8|3312|heat shock 70kDa protein 8##AK222628|HSPA8|3312|heat shock 70kDa protein 8##AK222785|HSPA8|3312|heat shock 70kDa protein 8##AK096100|HSPA8|3312|heat shock 70kDa protein 8##AK129885|HSPA8|3312|heat shock 70kDa protein 8##AK303935|HSPA8|3312|heat shock 70kDa protein 8##AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein##AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AK127457|GRAMD1B|57476|GRAM domain containing 1B	0.977282	CTCF.p2:-12:0.977
chr1	153769827	153769943	reg1004481.p2	13.065	+	BC003041 BC009916 NM_024330 AK075377 TSC_hg19_v1_chr1_+_153747897 AK123997 AY358409 AK074134 DQ893429 DQ895951 AK027499 BC029792	-22019	+	TSC_hg19_v1_chr1_+_153700548 BX640950 CR749376 CR627233 BC116458 AK290025 CR749212 BX640786 NM_023015	-69332	+	TSC_hg19_v1_chr1_+_153651222 BC063304 AK025024 NM_000906 X15357	-118589	+	AK094665 NM_020699 TSC_hg19_v1_chr1_-_153895452	125566	-	TSC_hg19_v1_chr1_-_153919148 AB007945 NM_014856	149261	-	AY726597 AK096382 BC053562 TSC_hg19_v1_chr1_-_153931074 AF289574	161108	-	BC003041|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC009916|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##NM_024330|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK075377|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK123997|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AY358409|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK074134|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ893429|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ895951|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK027499|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC029792|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BX640950|INTS3|65123|integrator complex subunit 3##CR749376|INTS3|65123|integrator complex subunit 3##CR627233|INTS3|65123|integrator complex subunit 3##BC116458|INTS3|65123|integrator complex subunit 3##AK290025|INTS3|65123|integrator complex subunit 3##CR749212|INTS3|65123|integrator complex subunit 3##BX640786|INTS3|65123|integrator complex subunit 3##NM_023015|INTS3|65123|integrator complex subunit 3##BC063304|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##AK025024|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##NM_000906|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##X15357|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B##NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B##AB007945|DENND4B|9909|DENN/MADD domain containing 4B##NM_014856|DENND4B|9909|DENN/MADD domain containing 4B##AY726597|CRTC2|200186|CREB regulated transcription coactivator 2##AK096382|CRTC2|200186|CREB regulated transcription coactivator 2##BC053562|CRTC2|200186|CREB regulated transcription coactivator 2##AF289574|CRTC2|200186|CREB regulated transcription coactivator 2	0.984239	CTCF.p2:-9:0.984
chr19	30364537	30364631	reg1003645.p2	13.064	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	-61683	+	TSC_hg19_v1_chr19_-_30206402 NM_031448	-158162	-	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	-158492	-	BC026184 NM_001252641	49966	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	68698	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	498796	+	AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536	0.999771	CTCF.p2:1:1.000
chr21	35815966	35816090	reg1005656.p1	13.064	+	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	-68203	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	-79682	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	-370099	+	AY789480 NM_001127670 EU008570	12044	-	AK311384 AY789479 EU008568 EU008569 AK313543 BC036452 NM_001127668 NM_001127669	15850	-	AK304336 NM_000219 BC069055	67624	-	NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK311384|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AY789479|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008568|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008569|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK313543|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC036452|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127668|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127669|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK304336|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_000219|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC069055|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1	0.999949	CTCF.p2:-14:1.000
chr12	121881147	121881257	reg1005057.p2	13.063	+	AF306709 TSC_hg19_v1_chr12_+_121837931 NM_025126 NM_194271 AK025439 AK225285 AK304366 BC007826 BC039029 BC046174 BC029038	-43238	+	AK025614 NM_001137559	-89191	-	TSC_hg19_v1_chr12_-_121790244 NM_016237	-90936	-	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	23872	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	137057	-	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	137712	-	AF306709|RNF34|80196|ring finger protein 34##NM_025126|RNF34|80196|ring finger protein 34##NM_194271|RNF34|80196|ring finger protein 34##AK025439|RNF34|80196|ring finger protein 34##AK225285|RNF34|80196|ring finger protein 34##BC007826|RNF34|80196|ring finger protein 34##BC039029|RNF34|80196|ring finger protein 34##BC046174|RNF34|80196|ring finger protein 34##AK025614|ANAPC5|51433|anaphase promoting complex subunit 5##NM_001137559|ANAPC5|51433|anaphase promoting complex subunit 5##NM_016237|ANAPC5|51433|anaphase promoting complex subunit 5##BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B	0.998654	CTCF.p2:4:0.999
chr8	36716544	36716666	reg1003418.p1	13.063	+	NM_001031836 AK302391 BC028701	-74735	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-1623618	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-3259110	-	TSC_hg19_v1_chr8_-_37457377 AK025743	740763	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	836712	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	877501	+	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2	0.972855	CTCF.p2:-17:0.973
chr1	160924138	160924253	reg1004988.p2	13.062	+	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	-69237	-	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	-91617	-	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	-158197	+	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	364	-	BT020103 CR533512 DQ892228 DQ895428 EU831648 EU831732 AB528601 AF207907 AK304412 TSC_hg19_v1_chr1_-_160990931 BC001533 AY358896 AK026665 AF154005 AK075152 AL136649	66703	-	TSC_hg19_v1_chr1_-_160990981 NM_016946	66856	-	AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2##BT020103|F11R|50848|F11 receptor##CR533512|F11R|50848|F11 receptor##DQ892228|F11R|50848|F11 receptor##DQ895428|F11R|50848|F11 receptor##EU831648|F11R|50848|F11 receptor##EU831732|F11R|50848|F11 receptor##AF207907|F11R|50848|F11 receptor##AK304412|F11R|50848|F11 receptor##BC001533|F11R|50848|F11 receptor##AY358896|F11R|50848|F11 receptor##AK026665|F11R|50848|F11 receptor##AF154005|F11R|50848|F11 receptor##AK075152|F11R|50848|F11 receptor##AL136649|F11R|50848|F11 receptor##NM_016946|F11R|50848|F11 receptor	0.619109	CTCF.p2:-3:0.384	CTCF.p2:-65:0.235
chr5	31581740	31581861	reg1004434.p1	13.062	+	NM_018356 TSC_hg19_v1_chr5_+_31532398 BC032845 AK299156 AK002055 BC021215 AB527598	-49365	+	TSC_hg19_v1_chr5_-_31532201 AK308093 AF189011 BC054003 BX647724 NM_001100412 NM_013235	-49578	-	TSC_hg19_v1_chr5_+_31193875 BC000019 AK024238	-387923	+	TSC_hg19_v1_chr5_+_31639424 AB002298	57670	+	NM_178140	217230	+	TSC_hg19_v1_chr5_+_32173523 AK055939	591716	+	NM_018356|C5orf22|55322|chromosome 5 open reading frame 22##BC032845|C5orf22|55322|chromosome 5 open reading frame 22##AK299156|C5orf22|55322|chromosome 5 open reading frame 22##AK002055|C5orf22|55322|chromosome 5 open reading frame 22##BC021215|C5orf22|55322|chromosome 5 open reading frame 22##AK308093|DROSHA|29102|drosha, ribonuclease type III##AF189011|DROSHA|29102|drosha, ribonuclease type III##BC054003|DROSHA|29102|drosha, ribonuclease type III##BX647724|DROSHA|29102|drosha, ribonuclease type III##NM_001100412|DROSHA|29102|drosha, ribonuclease type III##NM_013235|DROSHA|29102|drosha, ribonuclease type III##BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AB002298|PDZD2|23037|PDZ domain containing 2##NM_178140|PDZD2|23037|PDZ domain containing 2##AK055939|LOC153546|153546|uncharacterized LOC153546	0.896666	CTCF.p2:-14:0.897
chr15	22461272	22461437	reg1000586.p2	13.061	+	BC136597 BC136598 NM_001005241 DQ786223	-78909	+	BC136985 NM_001004719	-92877	+	NM_207355 BC066981	-378216	-	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	11868	-	AK097517 NM_001001413	274891	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	372116	+	BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5	4.904702	CTCF.p2:16:0.998	CTCF.p2:-21:0.978	CTCF.p2:-42:0.933	CTCF.p2:75:0.998
chr1	6950060	6950181	reg1005715.p1	13.061	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-104629	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-188189	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-188238	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	881256	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	894289	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	894705	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.999804	CTCF.p2:9:1.000
chr8	145181473	145181609	reg1006057.p2	13.060	+	TSC_hg19_v1_chr8_+_145159398 BC031273 BC018714 BC014082 AL136937	-22128	+	NM_032272 TSC_hg19_v1_chr8_+_145159381	-22197	+	TSC_hg19_v1_chr8_-_145159154 AK075518 AB052764 AB052765 BC025244 NM_030974	-22390	-	BC003035 BC009915 NM_016458 AK098226 BC015471	11154	+	AK295740 NM_001099280 NM_001099281 NM_032450 AK093563 AX748203 BC057824 BC067855 BC092486	21387	+	AX721087 NM_001008271 NM_001080514	139948	+	BC031273|MAF1|84232|MAF1 homolog (S. cerevisiae)##BC018714|MAF1|84232|MAF1 homolog (S. cerevisiae)##BC014082|MAF1|84232|MAF1 homolog (S. cerevisiae)##AL136937|MAF1|84232|MAF1 homolog (S. cerevisiae)##NM_032272|MAF1|84232|MAF1 homolog (S. cerevisiae)##AK075518|SHARPIN|81858|SHANK-associated RH domain interactor##AB052764|SHARPIN|81858|SHANK-associated RH domain interactor##AB052765|SHARPIN|81858|SHANK-associated RH domain interactor##BC025244|SHARPIN|81858|SHANK-associated RH domain interactor##NM_030974|SHARPIN|81858|SHANK-associated RH domain interactor##BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##AK295740|HEATR7A|727957|HEAT repeat containing 7A##NM_001099280|HEATR7A|727957|HEAT repeat containing 7A##NM_001099281|HEATR7A|727957|HEAT repeat containing 7A##NM_032450|HEATR7A|727957|HEAT repeat containing 7A##AK093563|HEATR7A|727957|HEAT repeat containing 7A##BC057824|HEATR7A|727957|HEAT repeat containing 7A##BC067855|HEATR7A|727957|HEAT repeat containing 7A##BC092486|HEATR7A|727957|HEAT repeat containing 7A##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)	0.990703	CTCF.p2:-7:0.991
chr13	42908350	42908465	reg1003684.p1	13.059	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	-62122	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	-196197	+	NM_152910 NM_178009 AB078967 AB078968	-285542	+	BC040889 NM_033012	228464	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	239927	+	NM_182508 AK310859 AK098238 BC093659 BC112237	447317	+	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30	0.320781	CTCF.p2:-21:0.321
chr16	3740567	3740682	reg1004220.p1	13.059	+	NM_005223	-37685	+	TSC_hg19_v1_chr16_-_3661587 NM_032444 AK122775	-79041	-	TSC_hg19_v1_chr16_-_3627397 AY601811 NM_178844 AK090431 AK090476	-113225	-	TSC_hg19_v1_chr16_-_3767521 U12595 BC001455 AF043254 AB528744 CU676340 DQ893476 DQ896346 BC000406 BC002994 AF154108 AK299127 BC018950 AK223049 AK223076 AK223205 BC023585 AK093344 NM_016292	26911	-	TSC_hg19_v1_chr16_-_3843474 AK304771	102902	-	AB210043 NM_001079846 NM_004380	189496	-	NM_005223|DNASE1|1773|deoxyribonuclease I##NM_032444|SLX4|84464|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)##AK122775|SLX4|84464|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)##AY601811|NLRC3|197358|NLR family, CARD domain containing 3##NM_178844|NLRC3|197358|NLR family, CARD domain containing 3##AK090431|NLRC3|197358|NLR family, CARD domain containing 3##AK090476|NLRC3|197358|NLR family, CARD domain containing 3##U12595|TRAP1|10131|TNF receptor-associated protein 1##BC001455|TRAP1|10131|TNF receptor-associated protein 1##AF043254|TRAP1|10131|TNF receptor-associated protein 1##DQ893476|TRAP1|10131|TNF receptor-associated protein 1##DQ896346|TRAP1|10131|TNF receptor-associated protein 1##BC000406|TRAP1|10131|TNF receptor-associated protein 1##BC002994|TRAP1|10131|TNF receptor-associated protein 1##AF154108|TRAP1|10131|TNF receptor-associated protein 1##AK299127|TRAP1|10131|TNF receptor-associated protein 1##BC018950|TRAP1|10131|TNF receptor-associated protein 1##AK223049|TRAP1|10131|TNF receptor-associated protein 1##AK223076|TRAP1|10131|TNF receptor-associated protein 1##AK223205|TRAP1|10131|TNF receptor-associated protein 1##BC023585|TRAP1|10131|TNF receptor-associated protein 1##AK093344|TRAP1|10131|TNF receptor-associated protein 1##NM_016292|TRAP1|10131|TNF receptor-associated protein 1##AK304771|CREBBP|1387|CREB binding protein##AB210043|CREBBP|1387|CREB binding protein##NM_001079846|CREBBP|1387|CREB binding protein##NM_004380|CREBBP|1387|CREB binding protein	0.977157	CTCF.p2:0:0.977
chr18	12893938	12894039	reg1004364.p2	13.059	+	CU678897 AB590517 BC008244 TSC_hg19_v1_chr18_-_12884237 M25393 AK225706 AK290649 AK292570 BC016727 NM_001207013 NM_002828 NM_080422 NM_080423	-9752	-	TSC_hg19_v1_chr18_+_12703040 NM_020232 AK225882 AF168712 AK057005 BC013356 CU680576	-190952	+	TSC_hg19_v1_chr18_-_12702776 AK298223	-191224	-	TSC_hg19_v1_chr18_+_12947986 NM_001013437 NM_031216	53997	+	TSC_hg19_v1_chr18_+_12948009 AK314403	54018	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	54076	+	BC008244|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##M25393|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK225706|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK290649|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK292570|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##BC016727|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_001207013|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_002828|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_080422|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_080423|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_020232|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK225882|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AF168712|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK057005|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##BC013356|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK298223|CEP76|79959|centrosomal protein 76kDa##NM_001013437|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_031216|SEH1L|81929|SEH1-like (S. cerevisiae)##AK314403|SEH1L|81929|SEH1-like (S. cerevisiae)##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)	0.026138	
chr1	213168952	213169080	reg1003750.p2	13.058	+	AK302675 TSC_hg19_v1_chr1_+_213124038	-44993	+	TSC_hg19_v1_chr1_+_213123945 AK290973 NM_001136474 NM_001136475 NM_024749 AK022567 AK096605 BC053836 BC051856 BC028194	-45099	+	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	-137336	+	TSC_hg19_v1_chr1_-_213188830 AK299208	19795	-	TSC_hg19_v1_chr1_-_213189125 AK294479 AK311276 AK299365 BC047469 AK295116 AF510741 AL079275 NM_144567	20111	-	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	55571	+	AK302675|VASH2|79805|vasohibin 2##AK290973|VASH2|79805|vasohibin 2##NM_001136474|VASH2|79805|vasohibin 2##NM_001136475|VASH2|79805|vasohibin 2##NM_024749|VASH2|79805|vasohibin 2##AK022567|VASH2|79805|vasohibin 2##AK096605|VASH2|79805|vasohibin 2##BC053836|VASH2|79805|vasohibin 2##BC051856|VASH2|79805|vasohibin 2##BC028194|VASH2|79805|vasohibin 2##AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK299208|ANGEL2|90806|angel homolog 2 (Drosophila)##AK294479|ANGEL2|90806|angel homolog 2 (Drosophila)##AK311276|ANGEL2|90806|angel homolog 2 (Drosophila)##AK299365|ANGEL2|90806|angel homolog 2 (Drosophila)##BC047469|ANGEL2|90806|angel homolog 2 (Drosophila)##AK295116|ANGEL2|90806|angel homolog 2 (Drosophila)##AF510741|ANGEL2|90806|angel homolog 2 (Drosophila)##AL079275|ANGEL2|90806|angel homolog 2 (Drosophila)##NM_144567|ANGEL2|90806|angel homolog 2 (Drosophila)##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1	0.065157	
chr1	85410739	85410902	reg1003415.p2	13.058	+	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	-51934	-	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-254744	-	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-370714	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	51888	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	103325	-	TSC_hg19_v1_chr1_-_85514184 BX647497 AK314354 NM_001253693 NM_018298	103378	-	AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3##BX647497|MCOLN3|55283|mucolipin 3##AK314354|MCOLN3|55283|mucolipin 3##NM_001253693|MCOLN3|55283|mucolipin 3##NM_018298|MCOLN3|55283|mucolipin 3	0.443852	CTCF.p2:-9:0.444
chr17	75538903	75539035	reg1006446.p1	13.057	+	AK056495 NM_001113495	-67645	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-91580	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-92187	+	TSC_hg19_v1_chr17_+_75543021 AK096234	4051	+	BC039479 NM_001142640 NM_018996	461313	+	TSC_hg19_v1_chr17_-_76124768 AK074065	585803	-	AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK074065|TMC6|11322|transmembrane channel-like 6	0.027292	
chrX	20460851	20460975	reg1004897.p2	13.057	+	TSC_hg19_v1_chrX_-_20285141 AK294373	-175749	-	TSC_hg19_v1_chrX_-_20285001 AB208933	-175956	-	AB102662 L07599 AB384785 BC096301 BC096302 BC096303 NM_004586 U08316 AK313932	-176183	-	TSC_hg19_v1_chrX_+_21392535 NM_001168647 NM_001168648 NM_001168649 NM_014927 AB020709 AK294728	931595	+	BC109031 AK092279 AX747450 NM_153270	1215518	-	BC005948 AF129505 AJ250584 NM_014332 AK312134	1315304	-	AK294373|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AB208933|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AB102662|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##L07599|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096301|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096302|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096303|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##NM_004586|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##U08316|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AK313932|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##NM_001168647|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168648|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168649|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_014927|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AB020709|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AK294728|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##BC109031|KLHL34|257240|kelch-like 34 (Drosophila)##AK092279|KLHL34|257240|kelch-like 34 (Drosophila)##NM_153270|KLHL34|257240|kelch-like 34 (Drosophila)##BC005948|SMPX|23676|small muscle protein, X-linked##AF129505|SMPX|23676|small muscle protein, X-linked##AJ250584|SMPX|23676|small muscle protein, X-linked##NM_014332|SMPX|23676|small muscle protein, X-linked##AK312134|SMPX|23676|small muscle protein, X-linked	0.969937	CTCF.p2:8:0.970
chr5	125874970	125875102	reg1004338.p2	13.055	+	NM_001146322 AK303857	-74220	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	-115849	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	-116193	+	TSC_hg19_v1_chr5_-_125930891 AB489160 EU831757 EU831835 S74728 BC073174 BC071712 AK295526 BC002515 AK312459 AK297365 NM_001182 NM_001201377 NM_001202404	55820	-	AK023255 NM_032177 TSC_hg19_v1_chr5_+_125936641 BC021161 AK024065 AK298497 AK225464 CR457305 DQ893213 DQ896542	61596	+	BC130495 BC130497 AK131015 NM_207408 HQ258080	92379	+	NM_001146322|GRAMD3|65983|GRAM domain containing 3##AK303857|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##EU831757|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##EU831835|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##S74728|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC073174|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC071712|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK295526|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC002515|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK312459|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK297365|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001182|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001201377|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001202404|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK023255|PHAX|51808|phosphorylated adaptor for RNA export##NM_032177|PHAX|51808|phosphorylated adaptor for RNA export##BC021161|PHAX|51808|phosphorylated adaptor for RNA export##AK024065|PHAX|51808|phosphorylated adaptor for RNA export##AK298497|PHAX|51808|phosphorylated adaptor for RNA export##AK225464|PHAX|51808|phosphorylated adaptor for RNA export##CR457305|PHAX|51808|phosphorylated adaptor for RNA export##DQ893213|PHAX|51808|phosphorylated adaptor for RNA export##DQ896542|PHAX|51808|phosphorylated adaptor for RNA export##BC130495|C5orf48|389320|chromosome 5 open reading frame 48##BC130497|C5orf48|389320|chromosome 5 open reading frame 48##AK131015|C5orf48|389320|chromosome 5 open reading frame 48##NM_207408|C5orf48|389320|chromosome 5 open reading frame 48##HQ258080|C5orf48|389320|chromosome 5 open reading frame 48	0.846365	CTCF.p2:6:0.846
chr8	75000482	75000603	reg1005002.p1	13.055	+	NM_001195797 NM_015364 BC020690 AF168121 AB590737 AB446498	-96922	+	NM_001040613 NM_017866 TSC_hg19_v1_chr8_+_74888429 BC002748	-112125	+	TSC_hg19_v1_chr8_-_74884503 BC093065 AL832244 NM_001204857 NM_001204858 NM_001204859 NM_001204860 NM_001204863 NM_001204864 NM_005648	-116031	-	BX537756 BC139832 BC098299 BC098314 BC099736 BC113856 BC114464 NM_020647 BC140875 BC140876	232986	-	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	262148	+	CR749657 NM_015886	736229	+	NM_001195797|LY96|23643|lymphocyte antigen 96##NM_015364|LY96|23643|lymphocyte antigen 96##BC020690|LY96|23643|lymphocyte antigen 96##AF168121|LY96|23643|lymphocyte antigen 96##AB446498|LY96|23643|lymphocyte antigen 96##NM_001040613|TMEM70|54968|transmembrane protein 70##NM_017866|TMEM70|54968|transmembrane protein 70##BC002748|TMEM70|54968|transmembrane protein 70##BC093065|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##AL832244|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204857|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204858|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204859|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204860|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204863|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204864|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_005648|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##BX537756|JPH1|56704|junctophilin 1##BC139832|JPH1|56704|junctophilin 1##BC098299|JPH1|56704|junctophilin 1##BC098314|JPH1|56704|junctophilin 1##BC099736|JPH1|56704|junctophilin 1##BC113856|JPH1|56704|junctophilin 1##BC114464|JPH1|56704|junctophilin 1##NM_020647|JPH1|56704|junctophilin 1##BC140875|JPH1|56704|junctophilin 1##BC140876|JPH1|56704|junctophilin 1##AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15	0.999585	CTCF.p2:-7:1.000
chr3	48545160	48545286	reg1006032.p1	13.054	+	AK124652 TSC_hg19_v1_chr3_-_48541588 AB527510 AK075441 AF520698 NM_016479	-3649	-	TSC_hg19_v1_chr3_-_48514495 AB097007 BC020279 AL117413 AK310083 AL832568 AF151051 BC001463 AK027728 AK298799	-30692	-	TSC_hg19_v1_chr3_+_48507641 AK315196 BC023630	-37577	+	DQ891635 DQ894825 BC010269 NM_004567 AF108765 D49818 TSC_hg19_v1_chr3_-_48594237 AK299097 AK312623 AY707863 AY714243 AY756062 AY756063 AY756064	49042	-	TSC_hg19_v1_chr3_-_48598563 AK298732	53334	-	BC002647 BC022096 NM_033199 TSC_hg19_v1_chr3_-_48601218	55987	-	AK124652|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK075441|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF520698|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##NM_016479|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AB097007|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC020279|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL117413|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL832568|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF151051|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC001463|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK298799|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK315196|TREX1|11277|three prime repair exonuclease 1##BC023630|TREX1|11277|three prime repair exonuclease 1##DQ891635|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##DQ894825|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##BC010269|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##NM_004567|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AF108765|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##D49818|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK299097|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK312623|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY707863|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY714243|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756062|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756063|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756064|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK298732|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##BC002647|UCN2|90226|urocortin 2##BC022096|UCN2|90226|urocortin 2##NM_033199|UCN2|90226|urocortin 2	0.954772	CTCF.p2:12:0.955
chr2	177005322	177005455	reg1003520.p1	13.053	+	NM_001199747 NM_001199746 NM_019558 BC038709 BC090853	-10858	+	BC044855 NM_014213 TSC_hg19_v1_chr2_+_176987450 X59372 AB463755	-17919	+	NM_002148 AK309451 BC069619 BC074760 X59373 AB464584 EU446483	-23862	+	NM_014621 X04706 AK313885 BC016763 TSC_hg19_v1_chr2_+_177016297 BC074797	10825	+	TSC_hg19_v1_chr2_+_177016337 AB464586	10961	+	BC005124 NM_006898	23416	+	NM_001199747|HOXD8|3234|homeobox D8##NM_001199746|HOXD8|3234|homeobox D8##NM_019558|HOXD8|3234|homeobox D8##BC038709|HOXD8|3234|homeobox D8##BC090853|HOXD8|3234|homeobox D8##BC044855|HOXD9|3235|homeobox D9##NM_014213|HOXD9|3235|homeobox D9##X59372|HOXD9|3235|homeobox D9##NM_002148|HOXD10|3236|homeobox D10##BC069619|HOXD10|3236|homeobox D10##BC074760|HOXD10|3236|homeobox D10##X59373|HOXD10|3236|homeobox D10##EU446483|HOXD10|3236|homeobox D10##NM_014621|HOXD4|3233|homeobox D4##X04706|HOXD4|3233|homeobox D4##AK313885|HOXD4|3233|homeobox D4##BC016763|HOXD4|3233|homeobox D4##BC074797|HOXD4|3233|homeobox D4##BC005124|HOXD3|3232|homeobox D3##NM_006898|HOXD3|3232|homeobox D3	0.493975	CTCF.p2:-9:0.483
chr1	67461851	67461999	reg1006475.p1	13.052	+	TSC_hg19_v1_chr1_+_67395952 AF515446 AY124188 AY124191 AY124194 NM_001077701 NM_001077704 BC017423	-65958	+	AK302061 NM_001077700 NM_001077702 NM_001077703 NM_001146110 NM_001146111 NM_001146112 NM_001146113 NM_020948 TSC_hg19_v1_chr1_+_67390672 AL831987 AF515447 AF515448 AY124186 AY124187 AY124189 AY124190 AY124192 AY124193 BC066898 AK307717 BC108726 CR627441 AB590466	-71266	+	TSC_hg19_v1_chr1_-_67390540 BC032406 HQ258529 AK292830 BC126379 BC126381 AK091603 BX648840 NM_024763 NM_207014	-71396	-	AB385301 BC093786 BC112031 AB044343 TSC_hg19_v1_chr1_-_67519828 D87449	57851	-	TSC_hg19_v1_chr1_-_67520070 AK289800 NM_015139	58128	-	NM_001013674	132294	-	AF515446|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124188|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124191|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124194|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077701|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077704|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##BC017423|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AK302061|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077700|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077702|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077703|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001146110|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001146111|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001146112|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001146113|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_020948|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AL831987|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AF515447|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AF515448|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124186|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124187|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124189|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124190|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124192|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124193|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##BC066898|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AK307717|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##BC108726|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##CR627441|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##BC032406|WDR78|79819|WD repeat domain 78##HQ258529|WDR78|79819|WD repeat domain 78##AK292830|WDR78|79819|WD repeat domain 78##BC126379|WDR78|79819|WD repeat domain 78##BC126381|WDR78|79819|WD repeat domain 78##AK091603|WDR78|79819|WD repeat domain 78##BX648840|WDR78|79819|WD repeat domain 78##NM_024763|WDR78|79819|WD repeat domain 78##NM_207014|WDR78|79819|WD repeat domain 78##BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##AK289800|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_015139|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_001013674|C1orf141|400757|chromosome 1 open reading frame 141	0.995256	CTCF.p2:-1:0.995
chr3	43920786	43920928	reg1007083.p1	13.051	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-188436	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-257344	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-257419	-	AK093476 AX748152 NM_001145030	362520	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	458773	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	459090	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.472026	CTCF.p2:-6:0.472
chr3	58400457	58400579	reg1006093.p1	13.051	+	TSC_hg19_v1_chr3_+_58318663 BC008943 AB209688 AK131385 AY437879 AK296215 BC014479 AY847220 AY847221 AY847222 AF399753 CU677017 DQ124707 DQ124708	-81844	+	TSC_hg19_v1_chr3_+_58318618 AY274811 NM_017771 AK000342 AK295542	-81905	+	AK311396 TSC_hg19_v1_chr3_+_58292265 AK311969	-108257	+	M34056 M19123 BC004115 AB528205 AM392999 AM393278 CR541911 CU674222 DQ891366 DQ894546 M34479 M34055 M54788 AB209241 AL117618 AK293153 BC000439 BC001924 TSC_hg19_v1_chr3_-_58419557 AK225569 AK311514 AK313022 J03576 X57778 AK225621 NM_000925 NM_001173468	18964	-	TSC_hg19_v1_chr3_+_58477822 NM_001128214 AK075297	77320	+	AK074934 NM_153331	83573	+	BC008943|PXK|54899|PX domain containing serine/threonine kinase##AB209688|PXK|54899|PX domain containing serine/threonine kinase##AK131385|PXK|54899|PX domain containing serine/threonine kinase##AY437879|PXK|54899|PX domain containing serine/threonine kinase##AK296215|PXK|54899|PX domain containing serine/threonine kinase##BC014479|PXK|54899|PX domain containing serine/threonine kinase##AY847220|PXK|54899|PX domain containing serine/threonine kinase##AY847221|PXK|54899|PX domain containing serine/threonine kinase##AY847222|PXK|54899|PX domain containing serine/threonine kinase##AF399753|PXK|54899|PX domain containing serine/threonine kinase##DQ124707|PXK|54899|PX domain containing serine/threonine kinase##DQ124708|PXK|54899|PX domain containing serine/threonine kinase##AY274811|PXK|54899|PX domain containing serine/threonine kinase##NM_017771|PXK|54899|PX domain containing serine/threonine kinase##AK000342|PXK|54899|PX domain containing serine/threonine kinase##AK295542|PXK|54899|PX domain containing serine/threonine kinase##AK311396|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AK311969|RPP14|11102|ribonuclease P/MRP 14kDa subunit##M34056|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M19123|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC004115|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM392999|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM393278|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##CR541911|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ891366|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ894546|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34479|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34055|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M54788|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AB209241|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AL117618|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK293153|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC000439|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC001924|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225569|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK311514|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK313022|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##J03576|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##X57778|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225621|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_000925|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_001173468|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_001128214|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK075297|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK074934|KCTD6|200845|potassium channel tetramerisation domain containing 6##NM_153331|KCTD6|200845|potassium channel tetramerisation domain containing 6	0.406861	CTCF.p2:-1:0.407
chr3	9012806	9012928	reg1005718.p1	13.051	+	AB528316 DQ891197 DQ894380 TSC_hg19_v1_chr3_-_9005128 AY004333 BC001302 AK222771 AF169796 AK023075 NM_020165	-7737	-	TSC_hg19_v1_chr3_-_8811300 NM_000916	-201583	-	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	-201781	-	AB007871 AB384477 AK094355 AF427144 TSC_hg19_v1_chr3_-_9290871 AF464189	277877	-	TSC_hg19_v1_chr3_-_9291320 NM_001033117 NM_014850 BC140004 AK054831	278451	-	TSC_hg19_v1_chr3_+_9404750 NM_001114092 NM_015453 AK023263 BC001622 AK001680 BC010421	391908	+	DQ891197|RAD18|56852|RAD18 homolog (S. cerevisiae)##DQ894380|RAD18|56852|RAD18 homolog (S. cerevisiae)##AY004333|RAD18|56852|RAD18 homolog (S. cerevisiae)##BC001302|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK222771|RAD18|56852|RAD18 homolog (S. cerevisiae)##AF169796|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK023075|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_020165|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_000916|OXTR|5021|oxytocin receptor##X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor##AB007871|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK094355|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF427144|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF464189|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_001114092|THUMPD3|25917|THUMP domain containing 3##NM_015453|THUMPD3|25917|THUMP domain containing 3##AK023263|THUMPD3|25917|THUMP domain containing 3##BC001622|THUMPD3|25917|THUMP domain containing 3##AK001680|THUMPD3|25917|THUMP domain containing 3##BC010421|THUMPD3|25917|THUMP domain containing 3	0.984767	CTCF.p2:-14:0.985
chr7	137846381	137846499	reg1004565.p1	13.051	+	AK298421 NM_001190906 NM_001190907 NM_005989 Z28339 AK298428 BC130625 BC130627 AK289425 HQ258384	-85222	+	TSC_hg19_v1_chr7_-_137686833 NM_001253775 NM_194071	-159588	-	AK131517 TSC_hg19_v1_chr7_-_137686812	-159628	-	TSC_hg19_v1_chr7_+_138145003 AK312610 AK075306 NM_003852 NM_015905 AK302679	298552	+	AF119042 BC028689 TSC_hg19_v1_chr7_+_138145183 AB528587 AF009353	298796	+	BC036796 NM_174959	502528	-	AK298421|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190906|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190907|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_005989|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##Z28339|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK298428|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130625|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130627|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK289425|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##HQ258384|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001253775|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_194071|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK131517|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK312610|TRIM24|8805|tripartite motif containing 24##AK075306|TRIM24|8805|tripartite motif containing 24##NM_003852|TRIM24|8805|tripartite motif containing 24##NM_015905|TRIM24|8805|tripartite motif containing 24##AK302679|TRIM24|8805|tripartite motif containing 24##AF119042|TRIM24|8805|tripartite motif containing 24##BC028689|TRIM24|8805|tripartite motif containing 24##AF009353|TRIM24|8805|tripartite motif containing 24##BC036796|SVOPL|136306|SVOP-like##NM_174959|SVOPL|136306|SVOP-like	0.07899	
chr2	6913369	6913500	reg1005658.p1	13.050	+	U23752 AB028641 NM_003108 BC025789 AB464713	-1080619	+	AK302299 NM_018436 BC029652	-3207637	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-3270865	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	92466	-	TSC_hg19_v1_chr2_-_7006650 AK308509	93269	-	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	104429	+	U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2	0.985182	CTCF.p2:25:0.985
chr11	130002263	130002382	reg1004227.p2	13.049	+	TSC_hg19_v1_chr11_+_129991591 L23113	-10694	+	L23114 TSC_hg19_v1_chr11_+_129979349	-22983	+	AK128162 NM_001243299	-61860	+	TSC_hg19_v1_chr11_+_130029676 NM_021978	27355	+	AK314173 TSC_hg19_v1_chr11_+_130029706	27382	+	TSC_hg19_v1_chr11_+_130029713 BC030532	27419	+	L23113|APLP2|334|amyloid beta (A4) precursor-like protein 2##L23114|APLP2|334|amyloid beta (A4) precursor-like protein 2##AK128162|APLP2|334|amyloid beta (A4) precursor-like protein 2##NM_001243299|APLP2|334|amyloid beta (A4) precursor-like protein 2##NM_021978|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##AK314173|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##BC030532|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)	0.054094	
chr20	45310125	45310231	reg1005446.p1	13.048	+	DQ892655 DQ895894 AF154121 AY072810 AK293902 AK056713 AK295748 AK315131 BC035966 NM_001193339 NM_001193342 NM_022829 TSC_hg19_v1_chr20_-_45280099	-30097	-	NM_080721 TSC_hg19_v1_chr20_-_45179294	-130925	-	AK001331 AK095611 BC024177 NM_018102 NM_199441 BC026321 TSC_hg19_v1_chr20_-_45142199	-167983	-	TSC_hg19_v1_chr20_-_45313125 AK096658 NM_001011554 NM_001193340	2946	-	TSC_hg19_v1_chr20_-_45318084 BC010637 BC035461 AB587589 AK096502 BC066309 BC019621 AK315182	7789	-	TSC_hg19_v1_chr20_-_45318164 BC009727 AB017505 AB065434 NM_033550	8043	-	DQ892655|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##DQ895894|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AF154121|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AY072810|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK293902|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK056713|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK295748|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK315131|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##BC035966|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193339|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193342|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_022829|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_080721|C20orf123|128506|chromosome 20 open reading frame 123##AK001331|ZNF334|55713|zinc finger protein 334##AK095611|ZNF334|55713|zinc finger protein 334##BC024177|ZNF334|55713|zinc finger protein 334##NM_018102|ZNF334|55713|zinc finger protein 334##NM_199441|ZNF334|55713|zinc finger protein 334##BC026321|ZNF334|55713|zinc finger protein 334##AK096658|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001011554|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193340|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##BC010637|TP53RK|112858|TP53 regulating kinase##BC035461|TP53RK|112858|TP53 regulating kinase##AK096502|TP53RK|112858|TP53 regulating kinase##BC066309|TP53RK|112858|TP53 regulating kinase##BC019621|TP53RK|112858|TP53 regulating kinase##AK315182|TP53RK|112858|TP53 regulating kinase##BC009727|TP53RK|112858|TP53 regulating kinase##AB017505|TP53RK|112858|TP53 regulating kinase##AB065434|TP53RK|112858|TP53 regulating kinase##NM_033550|TP53RK|112858|TP53 regulating kinase	0.734108	CTCF.p2:-3:0.734
chr3	30735133	30735238	reg1003579.p1	13.048	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-86782	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-87163	+	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	-1412221	+	AL832766 NM_207359	200967	-	TSC_hg19_v1_chr3_+_31574119 AK311488	838945	+	TSC_hg19_v1_chr3_+_31574468 AK074587	839264	+	D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.813572	CTCF.p2:17:0.814
chr7	47128536	47128650	reg1004617.p1	13.046	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-1167787	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-1195459	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-1200488	+	TSC_hg19_v1_chr7_-_47579207 BC071791	450616	-	TSC_hg19_v1_chr7_-_47621681 CR749644	493070	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	493190	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.997431	CTCF.p2:3:0.997
chr16	85120446	85120561	reg1005690.p1	13.045	+	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-59133	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-75374	-	TSC_hg19_v1_chr16_-_85045098 AK225768	-75410	-	BC093665 BC111944 AK126284 NM_198491	25551	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	524518	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	526450	+	AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK225768|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182	0.174729	
chr4	15480730	15480849	reg1004740.p1	13.045	+	NM_001080522 NM_001164720 NM_020785 AK096047 AK309178 BX647334 BC061921 BC053865 BC070395 EU450799	-9215	+	NM_031911 AF329839	-51142	+	NM_001135171	-104615	+	TSC_hg19_v1_chr4_+_15480833 AB037766 BC103710	60	+	AF157323 AM392665 AM393475 CU688970 DQ892452 DQ895664 AF176700 AF199420 TSC_hg19_v1_chr4_-_15656935	176126	-	TSC_hg19_v1_chr4_-_15656965 AF142481 AK310860 BC012320	176165	-	NM_001080522|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_001164720|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_020785|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AK096047|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AK309178|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BX647334|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC061921|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC053865|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC070395|CC2D2A|57545|coiled-coil and C2 domain containing 2A##EU450799|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135171|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AF157323|FBXL5|26234|F-box and leucine-rich repeat protein 5##AM392665|FBXL5|26234|F-box and leucine-rich repeat protein 5##AM393475|FBXL5|26234|F-box and leucine-rich repeat protein 5##DQ892452|FBXL5|26234|F-box and leucine-rich repeat protein 5##DQ895664|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF176700|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF199420|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF142481|FBXL5|26234|F-box and leucine-rich repeat protein 5##AK310860|FBXL5|26234|F-box and leucine-rich repeat protein 5##BC012320|FBXL5|26234|F-box and leucine-rich repeat protein 5	0.967308	CTCF.p2:-20:0.967
chr13	42684791	42684925	reg1003917.p1	13.044	+	NM_152910 NM_178009 AB078967 AB078968	-61993	+	AK289546 NM_001204504	-70687	+	TSC_hg19_v1_chr13_-_42535247 AB590583 BC131802 BC053674 NM_001009814 NM_015058	-149669	-	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	27352	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	161427	+	BC040889 NM_033012	452013	+	NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##AK289546|DGKH|160851|diacylglycerol kinase, eta##NM_001204504|DGKH|160851|diacylglycerol kinase, eta##BC131802|KIAA0564|23078|KIAA0564##BC053674|KIAA0564|23078|KIAA0564##NM_001009814|KIAA0564|23078|KIAA0564##NM_015058|KIAA0564|23078|KIAA0564##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11	0.999043	CTCF.p2:35:0.999
chr8	7916754	7916884	reg1006139.p1	13.044	+	AK292586 NM_001193630	-132961	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-164615	+	AF295370 AJ237673 NM_018661 AB037972 AB590071 AF217245 AF516673	-177894	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	169323	+	TSC_hg19_v1_chr8_-_8175862 AF075060	259069	-	AK122582 NM_001080826	322403	-	AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF295370|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2	0.999491	CTCF.p2:-9:0.999
chr5	149232697	149232817	reg1004097.p1	13.043	+	AK123614 NM_001172699	-81255	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	-122881	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	-122930	+	BC144044 BC035909 AB593141 M26061 NM_000440	91561	-	TSC_hg19_v1_chr5_+_149340320 NM_000112	107551	+	TSC_hg19_v1_chr5_+_149340352 AK312596	107594	+	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144044|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##BC035909|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##AB593141|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##M26061|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000440|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2	0.998447	CTCF.p2:10:0.998
chr14	33045438	33045549	reg1003991.p1	13.042	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-246957	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-498987	+	TSC_hg19_v1_chr14_+_32546223 BC075799	-499248	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	362997	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	1374656	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	1885994	-	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A	0.980391	CTCF.p2:-5:0.980
chr17	40253692	40253788	reg1003369.p2	13.042	+	NM_001242704	-63697	-	TSC_hg19_v1_chr17_+_40172124 AK027265 AK297975 AK054571 BC007316 BC007450	-81594	+	NM_001144927 NM_001144928 NM_001144929 NM_017595 TSC_hg19_v1_chr17_+_40172107	-81642	+	BC014949 AK296840 AK300900 AK021416 AK225549 NM_024119	10978	-	TSC_hg19_v1_chr17_-_40273386 AB527835 AF029777 BC032743 BC105977 BC039907 NM_021078	19609	-	NM_033194 BC093991 BC093993 AK130947	21061	+	NM_001242704|ZNF385C|201181|zinc finger protein 385C##AK027265|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK297975|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK054571|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007316|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007450|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144927|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144928|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144929|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_017595|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC014949|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK296840|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK300900|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK021416|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK225549|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_024119|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AF029777|KAT2A|2648|K(lysine) acetyltransferase 2A##BC032743|KAT2A|2648|K(lysine) acetyltransferase 2A##BC105977|KAT2A|2648|K(lysine) acetyltransferase 2A##BC039907|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_021078|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_033194|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093991|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093993|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##AK130947|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9	0.331212	CTCF.p2:3:0.331
chr8	8846941	8847071	reg1005480.p1	13.042	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	-96068	-	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	-287308	+	AK122582 NM_001080826	-607784	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	13359	+	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	13499	+	TSC_hg19_v1_chr8_-_9008167 BC043388 AK024067 NM_024607	161172	-	NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1##BC043388|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK024067|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_024607|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B	0.992351	CTCF.p2:18:0.992
chr22	29550563	29550685	reg1005479.p1	13.041	+	TSC_hg19_v1_chr22_+_29469035 BC063787 NM_001039570 NM_032045 AK056425 AB059618	-81602	+	CR456405 BC074758 BC126262 BC126264 AL035364 NM_015370	-92775	-	TSC_hg19_v1_chr22_+_29449893 BC042614	-100699	+	TSC_hg19_v1_chr22_+_29601914 BC046358 NM_133455 CR456407 CU012965 CU013253 AB463024 AJ416090	51268	+	TSC_hg19_v1_chr22_-_29663824 AL050346 NM_012265	113244	-	NM_001163285 NM_001163286 NM_001163287 NM_005243 NM_013986 TSC_hg19_v1_chr22_+_29664088	113423	+	BC063787|KREMEN1|83999|kringle containing transmembrane protein 1##NM_001039570|KREMEN1|83999|kringle containing transmembrane protein 1##NM_032045|KREMEN1|83999|kringle containing transmembrane protein 1##AK056425|KREMEN1|83999|kringle containing transmembrane protein 1##AB059618|KREMEN1|83999|kringle containing transmembrane protein 1##CR456405|C22orf31|25770|chromosome 22 open reading frame 31##BC074758|C22orf31|25770|chromosome 22 open reading frame 31##BC126262|C22orf31|25770|chromosome 22 open reading frame 31##BC126264|C22orf31|25770|chromosome 22 open reading frame 31##AL035364|C22orf31|25770|chromosome 22 open reading frame 31##NM_015370|C22orf31|25770|chromosome 22 open reading frame 31##BC042614|ZNRF3|84133|zinc and ring finger 3##BC046358|EMID1|129080|EMI domain containing 1##NM_133455|EMID1|129080|EMI domain containing 1##CR456407|EMID1|129080|EMI domain containing 1##CU012965|EMID1|129080|EMI domain containing 1##CU013253|EMID1|129080|EMI domain containing 1##AJ416090|EMID1|129080|EMI domain containing 1##AL050346|RHBDD3|25807|rhomboid domain containing 3##NM_012265|RHBDD3|25807|rhomboid domain containing 3##NM_001163285|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163286|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163287|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_005243|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_013986|EWSR1|2130|Ewing sarcoma breakpoint region 1	0.012253	
chr4	140452113	140452225	reg1005983.p1	13.040	+	AL136904 NM_031296	-77209	+	TSC_hg19_v1_chr4_-_140374867 AK097885	-77295	-	TSC_hg19_v1_chr4_-_140223626 AK023115 NM_001184987 NM_001184988 NM_001184989 NM_001184990	-228512	-	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	25264	-	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	134821	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	134965	+	AL136904|RAB33B|83452|RAB33B, member RAS oncogene family##NM_031296|RAB33B|83452|RAB33B, member RAS oncogene family##AK023115|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184987|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184988|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184989|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184990|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2	0.091571	
chr12	54773550	54773656	reg1004479.p1	13.039	+	AF237762 AF282693 TSC_hg19_v1_chr12_-_54758271 BC020614 NM_020370 AK290394	-15353	-	TSC_hg19_v1_chr12_+_54718927 AK223188 BC002849 AB463530 CU678240	-54666	+	TSC_hg19_v1_chr12_+_54718925 AB047848 AF086911	-54678	+	AB528580 CR457327 TSC_hg19_v1_chr12_-_54778374	4733	-	AK296564 TSC_hg19_v1_chr12_-_54778485 AF304052 NM_015481	4871	-	AB593085 TSC_hg19_v1_chr12_-_54779552 AK092724 AY461717	5931	-	AF237762|GPR84|53831|G protein-coupled receptor 84##AF282693|GPR84|53831|G protein-coupled receptor 84##BC020614|GPR84|53831|G protein-coupled receptor 84##NM_020370|GPR84|53831|G protein-coupled receptor 84##AK290394|GPR84|53831|G protein-coupled receptor 84##AK223188|COPZ1|22818|coatomer protein complex, subunit zeta 1##BC002849|COPZ1|22818|coatomer protein complex, subunit zeta 1##AB047848|COPZ1|22818|coatomer protein complex, subunit zeta 1##AF086911|COPZ1|22818|coatomer protein complex, subunit zeta 1##CR457327|ZNF385A|25946|zinc finger protein 385A##AK296564|ZNF385A|25946|zinc finger protein 385A##AF304052|ZNF385A|25946|zinc finger protein 385A##NM_015481|ZNF385A|25946|zinc finger protein 385A##AB593085|ZNF385A|25946|zinc finger protein 385A##AK092724|ZNF385A|25946|zinc finger protein 385A##AY461717|ZNF385A|25946|zinc finger protein 385A	1.892569	CTCF.p2:-25:0.902	CTCF.p2:27:0.991
chrX	152127571	152127695	reg1004374.p1	13.039	+	NM_001178115 AK095258	-17404	+	AK301530 NM_001178113	-41225	+	AK296967 NM_001178106 NM_001178107 NM_001178108 NM_001178109 NM_001178110 NM_007150 AY997296 DQ508022 DQ508023 DQ508024 DQ508025 DQ508026	-44624	+	BC101111 BC101112 BC101113 BC101114 AK295446 AK316104 AB067521 AY121806 NM_001103150 NM_001103151 NM_052926	33049	-	NM_001184924	35037	-	NM_013364 TSC_hg19_v1_chrX_+_152224838 AK312299	97171	+	NM_001178115|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK095258|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK301530|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178113|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK296967|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178106|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178107|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178108|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178109|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178110|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_007150|ZNF185|7739|zinc finger protein 185 (LIM domain)##AY997296|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508022|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508023|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508024|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508025|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508026|ZNF185|7739|zinc finger protein 185 (LIM domain)##BC101111|PNMA5|114824|paraneoplastic antigen like 5##BC101112|PNMA5|114824|paraneoplastic antigen like 5##BC101113|PNMA5|114824|paraneoplastic antigen like 5##AK295446|PNMA5|114824|paraneoplastic antigen like 5##AK316104|PNMA5|114824|paraneoplastic antigen like 5##AB067521|PNMA5|114824|paraneoplastic antigen like 5##AY121806|PNMA5|114824|paraneoplastic antigen like 5##NM_001103150|PNMA5|114824|paraneoplastic antigen like 5##NM_001103151|PNMA5|114824|paraneoplastic antigen like 5##NM_052926|PNMA5|114824|paraneoplastic antigen like 5##NM_001184924|PNMA5|114824|paraneoplastic antigen like 5##NM_013364|PNMA3|29944|paraneoplastic antigen MA3##AK312299|PNMA3|29944|paraneoplastic antigen MA3	0.994376	CTCF.p2:-20:0.994
chr11	71855182	71855316	reg1006549.p1	13.036	+	BC030285 NM_000804 BC126398	-8473	+	TSC_hg19_v1_chr11_-_71823742 AK311146 AK222622 BC005156 BC005393 AF077206 NM_014042 AL080071	-31468	-	TSC_hg19_v1_chr11_-_71814398 NM_017907	-40848	-	J05013 NM_016724 NM_016725 BC002947 AK223527 M28099	45442	+	NM_000802	45709	+	NM_016729 U78793 U78794 S73490 AB590148 DQ892744 DQ895990 BT007158 CR542019 M25317 M35069	47980	+	BC030285|FOLR3|2352|folate receptor 3 (gamma)##NM_000804|FOLR3|2352|folate receptor 3 (gamma)##BC126398|FOLR3|2352|folate receptor 3 (gamma)##AK311146|C11orf51|25906|chromosome 11 open reading frame 51##AK222622|C11orf51|25906|chromosome 11 open reading frame 51##BC005156|C11orf51|25906|chromosome 11 open reading frame 51##BC005393|C11orf51|25906|chromosome 11 open reading frame 51##AF077206|C11orf51|25906|chromosome 11 open reading frame 51##NM_014042|C11orf51|25906|chromosome 11 open reading frame 51##AL080071|C11orf51|25906|chromosome 11 open reading frame 51##NM_017907|LAMTOR1|55004|late endosomal/lysosomal adaptor, MAPK and MTOR activator 1##J05013|FOLR1|2348|folate receptor 1 (adult)##NM_016724|FOLR1|2348|folate receptor 1 (adult)##NM_016725|FOLR1|2348|folate receptor 1 (adult)##BC002947|FOLR1|2348|folate receptor 1 (adult)##AK223527|FOLR1|2348|folate receptor 1 (adult)##M28099|FOLR1|2348|folate receptor 1 (adult)##NM_000802|FOLR1|2348|folate receptor 1 (adult)##NM_016729|FOLR1|2348|folate receptor 1 (adult)##U78793|FOLR1|2348|folate receptor 1 (adult)##U78794|FOLR1|2348|folate receptor 1 (adult)##S73490|FOLR1|2348|folate receptor 1 (adult)##DQ892744|FOLR1|2348|folate receptor 1 (adult)##DQ895990|FOLR1|2348|folate receptor 1 (adult)##BT007158|FOLR1|2348|folate receptor 1 (adult)##CR542019|FOLR1|2348|folate receptor 1 (adult)##M25317|FOLR1|2348|folate receptor 1 (adult)##M35069|FOLR1|2348|folate receptor 1 (adult)	0.956939	CTCF.p2:-11:0.957
chr17	55817404	55817539	reg1005823.p1	13.035	+	AK093888 AX748353 NM_170721	-483098	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-483498	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-654328	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	109933	-	AK000746 NM_017949	163278	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	215205	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.891375	CTCF.p2:12:0.891
chr7	100787426	100787533	reg1004330.p1	13.035	+	NM_000602 NM_001165413 TSC_hg19_v1_chr7_+_100770384 AK293248 AK297728 AK298048 AK316225 BC020765 X04729 BC010860 X04429 X12701 BC005927 M16006	-17065	+	BC005847 TSC_hg19_v1_chr7_+_100728767 AK092927 AX747810 BC048194 NM_030961 BC011882	-58719	+	TSC_hg19_v1_chr7_+_100663360 AJ606307 AJ606308 NM_001040105	-124114	+	NM_001283 TSC_hg19_v1_chr7_+_100797756 AK312151 BC003561 AB015319	10249	+	BC063835 BC044212 TSC_hg19_v1_chr7_-_100808851 AK225839 NM_003378 BC036537	21373	-	BC037583 BC104841 AK096556 NM_198571	36046	-	NM_000602|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001165413|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK293248|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK297728|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK298048|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK316225|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC020765|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04729|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC010860|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04429|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X12701|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC005927|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##M16006|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC005847|TRIM56|81844|tripartite motif containing 56##BC048194|TRIM56|81844|tripartite motif containing 56##NM_030961|TRIM56|81844|tripartite motif containing 56##BC011882|TRIM56|81844|tripartite motif containing 56##AJ606307|MUC17|140453|mucin 17, cell surface associated##AJ606308|MUC17|140453|mucin 17, cell surface associated##NM_001040105|MUC17|140453|mucin 17, cell surface associated##NM_001283|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AK312151|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC003561|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AB015319|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC063835|VGF|7425|VGF nerve growth factor inducible##BC044212|VGF|7425|VGF nerve growth factor inducible##AK225839|VGF|7425|VGF nerve growth factor inducible##NM_003378|VGF|7425|VGF nerve growth factor inducible##BC036537|VGF|7425|VGF nerve growth factor inducible##BC037583|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##BC104841|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##AK096556|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##NM_198571|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)	0.910934	CTCF.p2:-3:0.884
chr7	108100549	108100658	reg1005043.p1	13.035	+	TSC_hg19_v1_chr7_-_108096830 BC114570 BC115736 AB002341 BX538010 AK299870 BC098401 NM_001193582 NM_001193583 NM_001193584 NM_005010	-3674	-	AJ001057 AB385311 NM_001037132	-220051	-	BC142619 BC140804 BC144591 AF028816 AK300385 NM_007356	-329811	-	TSC_hg19_v1_chr7_-_108142934 BC005203 AK002115	42369	-	AL834147 TSC_hg19_v1_chr7_-_108166546	65930	-	TSC_hg19_v1_chr7_-_108166573 AF263613 AF263947	65963	-	BC114570|NRCAM|4897|neuronal cell adhesion molecule##BC115736|NRCAM|4897|neuronal cell adhesion molecule##AB002341|NRCAM|4897|neuronal cell adhesion molecule##BX538010|NRCAM|4897|neuronal cell adhesion molecule##AK299870|NRCAM|4897|neuronal cell adhesion molecule##BC098401|NRCAM|4897|neuronal cell adhesion molecule##NM_001193582|NRCAM|4897|neuronal cell adhesion molecule##NM_001193583|NRCAM|4897|neuronal cell adhesion molecule##NM_001193584|NRCAM|4897|neuronal cell adhesion molecule##NM_005010|NRCAM|4897|neuronal cell adhesion molecule##AJ001057|NRCAM|4897|neuronal cell adhesion molecule##NM_001037132|NRCAM|4897|neuronal cell adhesion molecule##BC142619|LAMB4|22798|laminin, beta 4##BC140804|LAMB4|22798|laminin, beta 4##BC144591|LAMB4|22798|laminin, beta 4##AF028816|LAMB4|22798|laminin, beta 4##AK300385|LAMB4|22798|laminin, beta 4##NM_007356|LAMB4|22798|laminin, beta 4##BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8##AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8##AL834147|PNPLA8|50640|patatin-like phospholipase domain containing 8##AF263613|PNPLA8|50640|patatin-like phospholipase domain containing 8##AF263947|PNPLA8|50640|patatin-like phospholipase domain containing 8	0.259284	CTCF.p2:-1:0.259
chr1	25616656	25616807	reg1006934.p1	13.032	+	AK297151 NM_001127691 NM_016124 X63094 BC139922 AF510069 AF510070 AF312679 Z97026 DQ451878 X63097 AB018966 AB018967 AB018968 AB018969 AB037270 AB046420 AB049754 AF037626 AF177938 AF187846 AJ704215 AM183924 AY449381 AY449382 AY449383 AY449384 AY449385 AY751491 AY751492 AY751493 AY751494 AY751495 AY751496 FR745438 FR745439 FR745440 FR745441 JF436967 L08429 S57971 S70174 S73913 S78509 S82449 EU557240 EU557241 EU661905 EU661906	-17739	+	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	-42758	-	BC065040 TSC_hg19_v1_chr1_-_25573922	-42808	-	TSC_hg19_v1_chr1_+_25664821 NM_014313 AK311092 AF087880 AL136627 AK299180 AK311355 AK312588 AY358650 AY071927 BC007341 BC066908 AF081282	48103	+	AB018644 AB018645 AB030388 AB049753 AF056965 AF177938 AM295498 AM295506 DQ178642 DQ266353 DQ266400 DQ322275 FR691748 FR691750 GU474431 GU563377 GU810838 HE572747 JF436968 S57967 X63096 X63095 AY603478 X63098 Z97026 BC075081 M34015 AF510065 AF510066 AF510067 AF510068 X54534 NM_020485 NM_138616 NM_138617 NM_138618 BC139905	130609	-	TSC_hg19_v1_chr1_+_25757387 AK311472 NM_018202 AY845015 BC007687 AK001609 AY845035 AY845036 BC032427 BC020801	140754	+	AK297151|RHD|6007|Rh blood group, D antigen##NM_001127691|RHD|6007|Rh blood group, D antigen##NM_016124|RHD|6007|Rh blood group, D antigen##X63094|RHD|6007|Rh blood group, D antigen##BC139922|RHD|6007|Rh blood group, D antigen##AF510069|RHD|6007|Rh blood group, D antigen##AF510070|RHD|6007|Rh blood group, D antigen##AF312679|RHD|6007|Rh blood group, D antigen##Z97026|RHD|6007|Rh blood group, D antigen##DQ451878|RHD|6007|Rh blood group, D antigen##X63097|RHD|6007|Rh blood group, D antigen##AB018966|RHD|6007|Rh blood group, D antigen##AB018967|RHD|6007|Rh blood group, D antigen##AB018968|RHD|6007|Rh blood group, D antigen##AB018969|RHD|6007|Rh blood group, D antigen##AB037270|RHD|6007|Rh blood group, D antigen##AB046420|RHD|6007|Rh blood group, D antigen##AB049754|RHD|6007|Rh blood group, D antigen##AF037626|RHD|6007|Rh blood group, D antigen##AF177938|RHD|6007|Rh blood group, D antigen##AF187846|RHD|6007|Rh blood group, D antigen##AJ704215|RHD|6007|Rh blood group, D antigen##AM183924|RHD|6007|Rh blood group, D antigen##AY449381|RHD|6007|Rh blood group, D antigen##AY449382|RHD|6007|Rh blood group, D antigen##AY449383|RHD|6007|Rh blood group, D antigen##AY449384|RHD|6007|Rh blood group, D antigen##AY449385|RHD|6007|Rh blood group, D antigen##AY751491|RHD|6007|Rh blood group, D antigen##AY751492|RHD|6007|Rh blood group, D antigen##AY751493|RHD|6007|Rh blood group, D antigen##AY751494|RHD|6007|Rh blood group, D antigen##AY751495|RHD|6007|Rh blood group, D antigen##AY751496|RHD|6007|Rh blood group, D antigen##FR745438|RHD|6007|Rh blood group, D antigen##FR745439|RHD|6007|Rh blood group, D antigen##FR745440|RHD|6007|Rh blood group, D antigen##FR745441|RHD|6007|Rh blood group, D antigen##L08429|RHD|6007|Rh blood group, D antigen##S57971|RHD|6007|Rh blood group, D antigen##S70174|RHD|6007|Rh blood group, D antigen##S73913|RHD|6007|Rh blood group, D antigen##S78509|RHD|6007|Rh blood group, D antigen##S82449|RHD|6007|Rh blood group, D antigen##EU557240|RHD|6007|Rh blood group, D antigen##EU557241|RHD|6007|Rh blood group, D antigen##EU661905|RHD|6007|Rh blood group, D antigen##EU661906|RHD|6007|Rh blood group, D antigen##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##NM_014313|TMEM50A|23585|transmembrane protein 50A##AK311092|TMEM50A|23585|transmembrane protein 50A##AF087880|TMEM50A|23585|transmembrane protein 50A##AL136627|TMEM50A|23585|transmembrane protein 50A##AK299180|TMEM50A|23585|transmembrane protein 50A##AK311355|TMEM50A|23585|transmembrane protein 50A##AK312588|TMEM50A|23585|transmembrane protein 50A##AY358650|TMEM50A|23585|transmembrane protein 50A##AY071927|TMEM50A|23585|transmembrane protein 50A##BC007341|TMEM50A|23585|transmembrane protein 50A##BC066908|TMEM50A|23585|transmembrane protein 50A##AF081282|TMEM50A|23585|transmembrane protein 50A##AB018644|RHCE|6006|Rh blood group, CcEe antigens##AB018645|RHCE|6006|Rh blood group, CcEe antigens##AB030388|RHCE|6006|Rh blood group, CcEe antigens##AB049753|RHCE|6006|Rh blood group, CcEe antigens##AF056965|RHCE|6006|Rh blood group, CcEe antigens##AF177938|RHD|6007|Rh blood group, D antigen##AM295498|RHCE|6006|Rh blood group, CcEe antigens##AM295506|RHCE|6006|Rh blood group, CcEe antigens##DQ178642|RHCE|6006|Rh blood group, CcEe antigens##DQ266353|RHCE|6006|Rh blood group, CcEe antigens##DQ266400|RHCE|6006|Rh blood group, CcEe antigens##DQ322275|RHCE|6006|Rh blood group, CcEe antigens##FR691748|RHCE|6006|Rh blood group, CcEe antigens##FR691750|RHCE|6006|Rh blood group, CcEe antigens##GU474431|RHCE|6006|Rh blood group, CcEe antigens##GU563377|RHCE|6006|Rh blood group, CcEe antigens##GU810838|RHCE|6006|Rh blood group, CcEe antigens##S57967|RHCE|6006|Rh blood group, CcEe antigens##X63096|RHCE|6006|Rh blood group, CcEe antigens##X63095|RHCE|6006|Rh blood group, CcEe antigens##AY603478|RHCE|6006|Rh blood group, CcEe antigens##X63098|RHCE|6006|Rh blood group, CcEe antigens##Z97026|RHD|6007|Rh blood group, D antigen##BC075081|RHCE|6006|Rh blood group, CcEe antigens##M34015|RHCE|6006|Rh blood group, CcEe antigens##AF510065|RHCE|6006|Rh blood group, CcEe antigens##AF510066|RHCE|6006|Rh blood group, CcEe antigens##AF510067|RHCE|6006|Rh blood group, CcEe antigens##AF510068|RHCE|6006|Rh blood group, CcEe antigens##X54534|RHCE|6006|Rh blood group, CcEe antigens##NM_020485|RHCE|6006|Rh blood group, CcEe antigens##NM_138616|RHCE|6006|Rh blood group, CcEe antigens##NM_138617|RHCE|6006|Rh blood group, CcEe antigens##NM_138618|RHCE|6006|Rh blood group, CcEe antigens##BC139905|RHCE|6006|Rh blood group, CcEe antigens##AK311472|TMEM57|55219|transmembrane protein 57##NM_018202|TMEM57|55219|transmembrane protein 57##AY845015|TMEM57|55219|transmembrane protein 57##BC007687|TMEM57|55219|transmembrane protein 57##AK001609|TMEM57|55219|transmembrane protein 57##AY845035|TMEM57|55219|transmembrane protein 57##AY845036|TMEM57|55219|transmembrane protein 57##BC032427|TMEM57|55219|transmembrane protein 57##BC020801|TMEM57|55219|transmembrane protein 57	0.53354	CTCF.p2:6:0.534
chr4	47688418	47688549	reg1006213.p1	13.032	+	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	-201153	+	TSC_hg19_v1_chr4_-_47465720 BC008371	-222755	-	TSC_hg19_v1_chr4_-_47465683 AY542163 BC015145 NM_017845 AK000509 BC019826 AF182421	-222804	-	TSC_hg19_v1_chr4_+_47708352 D28417	19871	+	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	151607	-	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	228112	-	BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D##BC008371|COMMD8|54951|COMM domain containing 8##AY542163|COMMD8|54951|COMM domain containing 8##BC015145|COMMD8|54951|COMM domain containing 8##NM_017845|COMMD8|54951|COMM domain containing 8##AK000509|COMMD8|54951|COMM domain containing 8##BC019826|COMMD8|54951|COMM domain containing 8##AF182421|COMMD8|54951|COMM domain containing 8##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1	0.936771	CTCF.p2:3:0.937
chr1	170658793	170658912	reg1006618.p1	13.031	+	BC074993 NM_006902 NM_022716 EU446648 AB527492 AB451463 TSC_hg19_v1_chr1_+_170633380 M95929	-25490	+	TSC_hg19_v1_chr1_+_170632302 AK225968	-26562	+	TSC_hg19_v1_chr1_+_170501309 AK308339 NM_001146039 NM_152281 AK021814 BC064945 CU687974 BC047476 AK057661	-157549	+	NM_001163629 NM_025063 AK027203 BC113390 BC113392	245795	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	401189	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	495570	+	BC074993|PRRX1|5396|paired related homeobox 1##NM_006902|PRRX1|5396|paired related homeobox 1##NM_022716|PRRX1|5396|paired related homeobox 1##EU446648|PRRX1|5396|paired related homeobox 1##AB451463|PRRX1|5396|paired related homeobox 1##AK225968|PRRX1|5396|paired related homeobox 1##AK308339|GORAB|92344|golgin, RAB6-interacting##NM_001146039|GORAB|92344|golgin, RAB6-interacting##NM_152281|GORAB|92344|golgin, RAB6-interacting##AK021814|GORAB|92344|golgin, RAB6-interacting##BC064945|GORAB|92344|golgin, RAB6-interacting##BC047476|GORAB|92344|golgin, RAB6-interacting##AK057661|GORAB|92344|golgin, RAB6-interacting##NM_001163629|C1orf129|80133|chromosome 1 open reading frame 129##NM_025063|C1orf129|80133|chromosome 1 open reading frame 129##AK027203|C1orf129|80133|chromosome 1 open reading frame 129##BC113390|C1orf129|80133|chromosome 1 open reading frame 129##BC113392|C1orf129|80133|chromosome 1 open reading frame 129##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	0.935409	CTCF.p2:0:0.935
chr14	94900382	94900507	reg1005870.p1	13.031	+	TSC_hg19_v1_chr14_-_94856973 BX161449 BX247968 AK315637 X05826 X05827 NM_001002235 NM_001002236 NM_001127700 NM_001127701 NM_001127702 NM_001127703 NM_001127704 NM_001127705 NM_001127706 NM_001127707	-43453	-	TSC_hg19_v1_chr14_-_94855154 BC011991 NM_000295	-45303	-	K01396 X01683 BC015642 BX248257 TSC_hg19_v1_chr14_-_94854940 AK026174 BC070163	-45497	-	BC146962 BX248259 NM_001080451	18659	-	AY358700 AY220120 AY220119 AK301082 BC111498 AY220121 AY220118 AY185496 AY185497 NM_001042518 NM_175739	42147	-	BC040857 NM_173850	83736	-	BX161449|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BX247968|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##AK315637|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X05826|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X05827|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001002235|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001002236|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127700|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127701|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127702|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127703|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127704|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127705|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127706|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127707|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC011991|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_000295|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##K01396|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X01683|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC015642|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BX248257|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##AK026174|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC070163|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC146962|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##BX248259|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##NM_001080451|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##AY358700|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220120|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220119|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AK301082|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC111498|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220121|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220118|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185496|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185497|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_001042518|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_175739|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC040857|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12##NM_173850|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	0.997432	CTCF.p2:-10:0.997
chr18	35117959	35118089	reg1006289.p1	13.031	+	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-708904	-	TSC_hg19_v1_chr18_+_34409093 AK304230 AL832625 NM_020776 BC038772 AK292288 BX648875 BC045585 AB587550 AM393103 AM393380 BC146691	-708941	+	AB073382 TSC_hg19_v1_chr18_-_34408948	-709072	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	27672	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	27975	-	TSC_hg19_v1_chr18_-_36915657 D28405	1797632	-	BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK304230|KIAA1328|57536|KIAA1328##AL832625|KIAA1328|57536|KIAA1328##NM_020776|KIAA1328|57536|KIAA1328##AK292288|KIAA1328|57536|KIAA1328##BX648875|KIAA1328|57536|KIAA1328##BC045585|KIAA1328|57536|KIAA1328##AM393103|KIAA1328|57536|KIAA1328##AM393380|KIAA1328|57536|KIAA1328##BC146691|KIAA1328|57536|KIAA1328##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4	0.999955	CTCF.p2:-1:1.000
chr3	197392090	197392239	reg1006900.p1	13.031	+	TSC_hg19_v1_chr3_-_197354756 BC067856 AK309924 BC094848 AK299863 BC080518 AK311713	-37411	-	NM_203315 TSC_hg19_v1_chr3_-_197300209	-91963	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	-109322	-	TSC_hg19_v1_chr3_-_197463770 BC033615 NM_014687	71622	-	AK303462 NM_001011537	84259	+	NM_001145642	84403	-	BC067856|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK309924|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC094848|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK299863|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC080518|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK311713|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##NM_203315|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC033615|KIAA0226|9711|KIAA0226##NM_014687|KIAA0226|9711|KIAA0226##AK303462|FYTTD1|84248|forty-two-three domain containing 1##NM_001011537|FYTTD1|84248|forty-two-three domain containing 1##NM_001145642|KIAA0226|9711|KIAA0226	0.841806	CTCF.p2:0:0.842
chrX	53473063	53473197	reg1007542.p1	13.031	+	CR456723 TSC_hg19_v1_chrX_-_53461318 AF069134 BC008708 BC000372 BC000829 U73514 AF035555 U96132 NM_001037811 NM_004493	-11824	-	AK304179 AK057345 NM_144968 AK292871 TSC_hg19_v1_chrX_+_53449863 AK290346 BC036767 NM_001031745	-23284	+	TSC_hg19_v1_chrX_-_53449614 BC080185 BC112127 BC171726 NM_006306 AK291921	-23486	-	TSC_hg19_v1_chrX_-_53629608 AB071605	156484	-	TSC_hg19_v1_chrX_-_53713665 BC018750 BC038184 DQ097177 NM_031407 AK056671	240547	-	BC042108 NM_001184898	596479	-	CR456723|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AF069134|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC008708|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC000372|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC000829|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##U73514|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AF035555|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##U96132|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##NM_001037811|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##NM_004493|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AK304179|RIBC1|158787|RIB43A domain with coiled-coils 1##AK057345|RIBC1|158787|RIB43A domain with coiled-coils 1##NM_144968|RIBC1|158787|RIB43A domain with coiled-coils 1##AK292871|RIBC1|158787|RIB43A domain with coiled-coils 1##AK290346|RIBC1|158787|RIB43A domain with coiled-coils 1##BC036767|RIBC1|158787|RIB43A domain with coiled-coils 1##NM_001031745|RIBC1|158787|RIB43A domain with coiled-coils 1##BC080185|SMC1A|8243|structural maintenance of chromosomes 1A##BC112127|SMC1A|8243|structural maintenance of chromosomes 1A##BC171726|SMC1A|8243|structural maintenance of chromosomes 1A##NM_006306|SMC1A|8243|structural maintenance of chromosomes 1A##AK291921|SMC1A|8243|structural maintenance of chromosomes 1A##AB071605|HUWE1|10075|HECT, UBA and WWE domain containing 1##BC018750|HUWE1|10075|HECT, UBA and WWE domain containing 1##BC038184|HUWE1|10075|HECT, UBA and WWE domain containing 1##DQ097177|HUWE1|10075|HECT, UBA and WWE domain containing 1##NM_031407|HUWE1|10075|HECT, UBA and WWE domain containing 1##AK056671|HUWE1|10075|HECT, UBA and WWE domain containing 1##BC042108|PHF8|23133|PHD finger protein 8##NM_001184898|PHF8|23133|PHD finger protein 8	0.629106	CTCF.p2:0:0.629
chr13	103792751	103792875	reg1004669.p2	13.030	+	NM_000452 U10417	-73618	-	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-294327	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-294559	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	2325491	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	2325778	+	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	3394536	-	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2	0.0	
chr16	12990556	12990674	reg1005490.p1	13.030	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-92896	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-92964	-	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-920042	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	4853	+	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	1023416	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	1174471	+	AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2	0.35795	CTCF.p2:2:0.358
chr13	111868692	111868823	reg1004177.p2	13.029	+	AK300272 TSC_hg19_v1_chr13_+_111855425	-13335	+	NM_001113513 BC050521	-29571	+	TSC_hg19_v1_chr13_+_111806070 D63476	-62679	+	BC029889 NM_152324	104257	+	NM_005986	853155	+	AK130866 NM_145248 BC016750	1161902	+	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113513|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC050521|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##D63476|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC029889|C13orf16|121793|chromosome 13 open reading frame 16##NM_152324|C13orf16|121793|chromosome 13 open reading frame 16##NM_005986|SOX1|6656|SRY (sex determining region Y)-box 1##AK130866|SPACA7|122258|sperm acrosome associated 7##NM_145248|SPACA7|122258|sperm acrosome associated 7##BC016750|SPACA7|122258|sperm acrosome associated 7	0.999305	CTCF.p2:5:0.999
chr17	72292857	72292988	reg1006251.p1	13.029	+	BC039582 NM_001172810 NM_023036 BC033013 AF250288	-22516	+	BX647912 NM_052869	-48418	+	TSC_hg19_v1_chr17_+_72209709 NM_032646 BC107492 BC107602 AK315163 AF319952 BC005168	-83253	+	NM_153209 TSC_hg19_v1_chr17_+_72322355 BC067749 BC026362 BC110989 AK094619 BC143327 BC093631 BC104852	29485	+	NM_001080466	65035	-	BC143807 AB196530 AB528868 AY288421 NM_181790	70672	+	BC039582|DNAI2|64446|dynein, axonemal, intermediate chain 2##NM_001172810|DNAI2|64446|dynein, axonemal, intermediate chain 2##NM_023036|DNAI2|64446|dynein, axonemal, intermediate chain 2##BC033013|DNAI2|64446|dynein, axonemal, intermediate chain 2##AF250288|DNAI2|64446|dynein, axonemal, intermediate chain 2##BX647912|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_052869|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_032646|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107492|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107602|TTYH2|94015|tweety homolog 2 (Drosophila)##AK315163|TTYH2|94015|tweety homolog 2 (Drosophila)##AF319952|TTYH2|94015|tweety homolog 2 (Drosophila)##BC005168|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_153209|KIF19|124602|kinesin family member 19##BC067749|KIF19|124602|kinesin family member 19##BC026362|KIF19|124602|kinesin family member 19##BC110989|KIF19|124602|kinesin family member 19##AK094619|KIF19|124602|kinesin family member 19##BC143327|KIF19|124602|kinesin family member 19##BC093631|KIF19|124602|kinesin family member 19##BC104852|KIF19|124602|kinesin family member 19##NM_001080466|BTBD17|388419|BTB (POZ) domain containing 17##BC143807|GPR142|350383|G protein-coupled receptor 142##AB196530|GPR142|350383|G protein-coupled receptor 142##AY288421|GPR142|350383|G protein-coupled receptor 142##NM_181790|GPR142|350383|G protein-coupled receptor 142	0.793889	CTCF.p2:-4:0.794
chr10	71981403	71981537	reg1005802.p1	13.028	+	TSC_hg19_v1_chr10_-_71930260 AK298591 AK312469 BC003658 AF274026 AF087897 AF217959 AF261717 AY008268 AL136724 NM_001142648 NM_020150	-51191	-	TSC_hg19_v1_chr10_-_71906457 BC047424 NM_001040273 NM_173555	-74990	-	TSC_hg19_v1_chr10_-_71906446 BC030242 AK074968 BC111501 BC042629	-75042	-	AF108211 AB590125 AF217186 DQ893597 AB026723 TSC_hg19_v1_chr10_-_71993148 BC107882 AF154065 BC105034 BC105036 AF092439 AF119665 BC001022 BC061581 AK058193 NM_021129	11683	-	NM_022146	61979	-	TSC_hg19_v1_chr10_-_72083680 AL122117	102228	-	AK298591|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AK312469|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##BC003658|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF274026|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF087897|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF217959|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF261717|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AY008268|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AL136724|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##NM_001142648|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##NM_020150|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##BC047424|TYSND1|219743|trypsin domain containing 1##NM_001040273|TYSND1|219743|trypsin domain containing 1##NM_173555|TYSND1|219743|trypsin domain containing 1##BC030242|TYSND1|219743|trypsin domain containing 1##AK074968|TYSND1|219743|trypsin domain containing 1##BC111501|TYSND1|219743|trypsin domain containing 1##BC042629|TYSND1|219743|trypsin domain containing 1##AF108211|PPA1|5464|pyrophosphatase (inorganic) 1##AF217186|PPA1|5464|pyrophosphatase (inorganic) 1##DQ893597|PPA1|5464|pyrophosphatase (inorganic) 1##AB026723|PPA1|5464|pyrophosphatase (inorganic) 1##BC107882|PPA1|5464|pyrophosphatase (inorganic) 1##AF154065|PPA1|5464|pyrophosphatase (inorganic) 1##BC105034|PPA1|5464|pyrophosphatase (inorganic) 1##BC105036|PPA1|5464|pyrophosphatase (inorganic) 1##AF092439|PPA1|5464|pyrophosphatase (inorganic) 1##AF119665|PPA1|5464|pyrophosphatase (inorganic) 1##BC001022|PPA1|5464|pyrophosphatase (inorganic) 1##BC061581|PPA1|5464|pyrophosphatase (inorganic) 1##AK058193|PPA1|5464|pyrophosphatase (inorganic) 1##NM_021129|PPA1|5464|pyrophosphatase (inorganic) 1##NM_022146|NPFFR1|64106|neuropeptide FF receptor 1##AL122117|LRRC20|55222|leucine rich repeat containing 20	0.107842	
chr7	50437235	50437388	reg1004581.p2	13.028	+	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	-88992	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	-92958	+	NM_001161834	-301630	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	80743	-	AJ310724 BC000485 BC008366 M76180 AK298321 NM_000790 NM_001242886 NM_001242887 NM_001242888 NM_001242889 NM_001242890 TSC_hg19_v1_chr7_-_50628769	191448	-	M88700 TSC_hg19_v1_chr7_-_50633103 AK298392 NM_001082971	195786	-	AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1##AJ310724|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC000485|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC008366|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##M76180|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298321|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_000790|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242886|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242887|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242888|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242889|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242890|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##M88700|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298392|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001082971|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)	0.967873	CTCF.p2:8:0.968
chr17	18529046	18529165	reg1003066.p1	13.027	+	BC101585 BC104815 BC143561 TSC_hg19_v1_chr17_-_18528914 BC062767 BX647826 AK093811 AX748319	-198	-	AK296659 NM_001040078 AK315818 BC073889 BC105943 TSC_hg19_v1_chr17_+_18380141 CU687266	-148973	+	BC036791 NM_001145127 AK298286 BC026998	-248018	+	NM_001039397	18634	-	NM_001145045	56466	-	AK301647 DQ232882 NM_001037330 AK316368 AK301639 AK298836 BC146902 BC146907	96311	+	BC101585|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC104815|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC143561|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC062767|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BX647826|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##AK093811|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001040078|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##AK315818|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC073889|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##BC036791|EVPLL|645027|envoplakin-like##NM_001145127|EVPLL|645027|envoplakin-like##AK298286|EVPLL|645027|envoplakin-like##BC026998|EVPLL|645027|envoplakin-like##NM_001039397|TBC1D28|254272|TBC1 domain family, member 28##NM_001145045|ZNF286B|729288|zinc finger protein 286B##AK301647|TRIM16L|147166|tripartite motif containing 16-like##DQ232882|TRIM16L|147166|tripartite motif containing 16-like##NM_001037330|TRIM16L|147166|tripartite motif containing 16-like##AK316368|TRIM16L|147166|tripartite motif containing 16-like##AK301639|TRIM16L|147166|tripartite motif containing 16-like##AK298836|TRIM16L|147166|tripartite motif containing 16-like##BC146902|TRIM16L|147166|tripartite motif containing 16-like##BC146907|TRIM16L|147166|tripartite motif containing 16-like	2.982001	CTCF.p2:-13:0.999	CTCF.p2:34:0.984	CTCF.p2:-61:0.999
chr2	76826985	76827129	reg1005222.p1	13.027	+	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-889006	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-889338	-	TSC_hg19_v1_chr2_+_75873908 NM_014763 AK295578 AK291250 BC030144 CU688824 AB463123 BC021051 D14660 DQ892303 DQ895502	-953119	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	922361	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	2425781	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	2488076	-	BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_014763|MRPL19|9801|mitochondrial ribosomal protein L19##AK295578|MRPL19|9801|mitochondrial ribosomal protein L19##AK291250|MRPL19|9801|mitochondrial ribosomal protein L19##BC030144|MRPL19|9801|mitochondrial ribosomal protein L19##BC021051|MRPL19|9801|mitochondrial ribosomal protein L19##D14660|MRPL19|9801|mitochondrial ribosomal protein L19##DQ892303|MRPL19|9801|mitochondrial ribosomal protein L19##DQ895502|MRPL19|9801|mitochondrial ribosomal protein L19##BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta	0.97589	CTCF.p2:35:0.976
chr5	118127839	118127962	reg1005343.p1	13.027	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-2217386	-	TSC_hg19_v1_chr5_+_115898220 D28352	-2229676	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-2707179	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	196338	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	278911	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	279265	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.999575	CTCF.p2:16:1.000
chr5	158871624	158871758	reg1005396.p1	13.027	+	BC074723 M65272 NM_002187	-114217	-	TSC_hg19_v1_chr5_+_158690297 AY444562 AK057996 BC013425	-181405	+	NM_145049	-181603	+	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	472134	+	TSC_hg19_v1_chr5_+_159436145 AK315262	564456	+	AK222641 TSC_hg19_v1_chr5_+_159436161 AK222984 NM_003314 U46570	564476	+	BC074723|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##M65272|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_002187|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##AY444562|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK057996|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##BC013425|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_145049|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##AK315262|TTC1|7265|tetratricopeptide repeat domain 1##AK222641|TTC1|7265|tetratricopeptide repeat domain 1##AK222984|TTC1|7265|tetratricopeptide repeat domain 1##NM_003314|TTC1|7265|tetratricopeptide repeat domain 1##U46570|TTC1|7265|tetratricopeptide repeat domain 1	0.918539	CTCF.p2:-20:0.919
chr7	93717188	93717324	reg1004908.p2	13.027	+	BT009853 DQ894078 BC000899 TSC_hg19_v1_chr7_-_93633668 CR749267 AF007551 AK313984 BC012595 NM_005868	-83642	-	NM_004126 BC009709	-166200	+	BC029367 NM_021955	-181437	+	J03464 NM_000089 X02488	306616	+	TSC_hg19_v1_chr7_+_94024206 AK297786 AK223175 AK300194 Z74616 AK226074 BC042586 BC054498 Y00724 CU691094 AB384984	307015	+	TSC_hg19_v1_chr7_+_94139172 BC029543 NM_022900 BC063284 AF397424	421866	+	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##J03464|COL1A2|1278|collagen, type I, alpha 2##NM_000089|COL1A2|1278|collagen, type I, alpha 2##X02488|COL1A2|1278|collagen, type I, alpha 2##AK297786|COL1A2|1278|collagen, type I, alpha 2##AK223175|COL1A2|1278|collagen, type I, alpha 2##AK300194|COL1A2|1278|collagen, type I, alpha 2##Z74616|COL1A2|1278|collagen, type I, alpha 2##AK226074|COL1A2|1278|collagen, type I, alpha 2##BC042586|COL1A2|1278|collagen, type I, alpha 2##BC054498|COL1A2|1278|collagen, type I, alpha 2##Y00724|COL1A2|1278|collagen, type I, alpha 2##BC029543|CASD1|64921|CAS1 domain containing 1##NM_022900|CASD1|64921|CAS1 domain containing 1##BC063284|CASD1|64921|CAS1 domain containing 1##AF397424|CASD1|64921|CAS1 domain containing 1	0.930297	CTCF.p2:6:0.930
chr11	76391999	76392113	reg1003313.p2	13.026	+	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	-10247	-	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	-11088	-	TSC_hg19_v1_chr11_+_76156061 AK304043 BC033404 NM_020193 AK309621 BC021688 AK125114	-235953	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	102221	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	179876	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	179937	+	BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##AK304043|C11orf30|56946|chromosome 11 open reading frame 30##BC033404|C11orf30|56946|chromosome 11 open reading frame 30##NM_020193|C11orf30|56946|chromosome 11 open reading frame 30##AK309621|C11orf30|56946|chromosome 11 open reading frame 30##BC021688|C11orf30|56946|chromosome 11 open reading frame 30##AK125114|C11orf30|56946|chromosome 11 open reading frame 30##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3	0.973154	CTCF.p2:6:0.947
chr18	3281555	3281709	reg1005418.p1	13.026	+	NM_001144944 NM_001144945	-18969	+	TSC_hg19_v1_chr18_+_3262184 BC004994	-19435	+	NM_033546 AY320408 TSC_hg19_v1_chr18_+_3262134 AK291726 U26162 D50372 D82058	-19487	+	NM_174886	130439	+	NM_173207 AK291112	165985	+	NM_173209 NM_173208 TSC_hg19_v1_chr18_+_3450174 NM_003244 AK309471 X89750	168448	+	NM_001144944|MYL12B|103910|myosin, light chain 12B, regulatory##NM_001144945|MYL12B|103910|myosin, light chain 12B, regulatory##BC004994|MYL12B|103910|myosin, light chain 12B, regulatory##NM_033546|MYL12B|103910|myosin, light chain 12B, regulatory##AY320408|MYL12B|103910|myosin, light chain 12B, regulatory##AK291726|MYL12B|103910|myosin, light chain 12B, regulatory##U26162|MYL12B|103910|myosin, light chain 12B, regulatory##D50372|MYL12B|103910|myosin, light chain 12B, regulatory##D82058|MYL12B|103910|myosin, light chain 12B, regulatory##NM_174886|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173207|TGIF1|7050|TGFB-induced factor homeobox 1##AK291112|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1##NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1##AK309471|TGIF1|7050|TGFB-induced factor homeobox 1##X89750|TGIF1|7050|TGFB-induced factor homeobox 1	0.984832	CTCF.p2:-17:0.985
chr12	120868377	120868487	reg1002563.p2	13.025	+	AB463899 AB012851 NM_002442 TSC_hg19_v1_chr12_-_120806968	-61496	-	AB464016 EU832774 GQ129318 AK311830 BC005386 BC013384 BC106725 BC106726 M21054 NM_000928	-102859	-	NM_012240 TSC_hg19_v1_chr12_+_120740123 BC034736 AF083109 BC109319 BC109320	-128290	+	TSC_hg19_v1_chr12_+_120875920 AK312009 NM_004373 BC107861 BC070186 BC007723 DQ893099 DQ896371	7478	+	U75688 DQ893091 DQ896363 AF161481 AK312006 BC055313 BC002638 NM_016399	15757	-	TSC_hg19_v1_chr12_+_120884261 NM_176818 AK094319	15788	+	AB012851|MSI1|4440|musashi homolog 1 (Drosophila)##NM_002442|MSI1|4440|musashi homolog 1 (Drosophila)##EU832774|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##GQ129318|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##AK311830|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC005386|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC013384|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106725|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106726|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##M21054|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##NM_000928|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##NM_012240|SIRT4|23409|sirtuin 4##BC034736|SIRT4|23409|sirtuin 4##AF083109|SIRT4|23409|sirtuin 4##BC109319|SIRT4|23409|sirtuin 4##BC109320|SIRT4|23409|sirtuin 4##AK312009|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##NM_004373|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC107861|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC070186|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC007723|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ893099|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ896371|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##U75688|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ893091|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ896363|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AF161481|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AK312006|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC055313|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC002638|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##NM_016399|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##NM_176818|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##AK094319|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)	0.538639	CTCF.p2:-5:0.512
chr17	1179581	1179693	reg1004232.p1	13.025	+	NM_001164405	-5780	+	TSC_hg19_v1_chr17_-_1090565 AK126882 AK124547 NM_001159746	-89049	-	AK302682 AB384846 TSC_hg19_v1_chr17_-_1083048 NM_021962 U01147	-96568	-	AB090231 NM_172367 BC142615	3327	+	TSC_hg19_v1_chr17_-_1248347 L13388	68719	-	TSC_hg19_v1_chr17_-_1303504 BT007161 CU674076 EU176525 U28936 AB590347 BC000179 AX775995 U43399 U43430 U54778 U20972 BC001440 AY883089 AK295260 AK295997 AK296050 AK296555 AK128785 AK316185 AK316201	123832	-	NM_001164405|BHLHA9|727857|basic helix-loop-helix family, member a9##AK126882|ABR|29|active BCR-related gene##AK124547|ABR|29|active BCR-related gene##NM_001159746|ABR|29|active BCR-related gene##AK302682|ABR|29|active BCR-related gene##NM_021962|ABR|29|active BCR-related gene##U01147|ABR|29|active BCR-related gene##AB090231|TUSC5|286753|tumor suppressor candidate 5##NM_172367|TUSC5|286753|tumor suppressor candidate 5##BC142615|TUSC5|286753|tumor suppressor candidate 5##L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BT007161|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##EU176525|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U28936|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC000179|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43399|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43430|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U54778|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U20972|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC001440|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AY883089|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295260|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295997|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296050|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296555|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK128785|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316185|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316201|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	0.992088	CTCF.p2:-3:0.992
chr18	45299154	45299268	reg1004820.p1	13.025	+	TSC_hg19_v1_chr18_-_44702736 NM_016097	-596461	-	TSC_hg19_v1_chr18_-_44702734 AK027108	-596478	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	-596522	-	BC014840 NM_005901	157714	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	158004	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	158278	-	NM_016097|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2	0.937108	CTCF.p2:-18:0.884
chr2	7037411	7037553	reg1006127.p1	13.025	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-19619	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-30779	-	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	-31582	-	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	20105	+	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1784721	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1940237	-	NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa	0.073524	
chr3	141030722	141030845	reg1004548.p1	13.025	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	-80097	+	AF403029 BC008324 NM_080862 AK056367	-260026	+	TSC_hg19_v1_chr3_+_140770412 BC051354	-260305	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	12273	+	TSC_hg19_v1_chr3_+_141087345 AK311501	56574	+	AK311479 TSC_hg19_v1_chr3_+_141105293	74505	+	AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38	0.202927	CTCF.p2:-6:0.203
chr18	74634209	74634327	reg1004665.p1	13.024	+	AF085243 AF085244 NM_007345	-98153	+	TSC_hg19_v1_chr18_+_74534512 BX648028	-99758	+	TSC_hg19_v1_chr18_-_74534239 BC032908	-100029	-	BC130034 TSC_hg19_v1_chr18_-_74692098	57762	-	AK074315 TSC_hg19_v1_chr18_-_74728814	94488	-	CR536534 CR541919 TSC_hg19_v1_chr18_-_74729012 AK296492 M30515 M30516 BC008749 BC101771 BC101773 BC143348 BC143350 M30047 BC080654 M13577 AK289893 AK098402 AK128788 CR627018 AK128770 BC068550	94727	-	AF085243|ZNF236|7776|zinc finger protein 236##AF085244|ZNF236|7776|zinc finger protein 236##NM_007345|ZNF236|7776|zinc finger protein 236##BX648028|ZNF236|7776|zinc finger protein 236##BC032908|LOC100131655|100131655|uncharacterized LOC100131655##BC130034|MBP|4155|myelin basic protein##AK074315|MBP|4155|myelin basic protein##CR536534|MBP|4155|myelin basic protein##CR541919|MBP|4155|myelin basic protein##M30515|MBP|4155|myelin basic protein##M30516|MBP|4155|myelin basic protein##BC008749|MBP|4155|myelin basic protein##BC101771|MBP|4155|myelin basic protein##BC101773|MBP|4155|myelin basic protein##BC143348|MBP|4155|myelin basic protein##BC143350|MBP|4155|myelin basic protein##M30047|MBP|4155|myelin basic protein##BC080654|MBP|4155|myelin basic protein##M13577|MBP|4155|myelin basic protein##AK289893|MBP|4155|myelin basic protein##AK098402|MBP|4155|myelin basic protein##AK128788|MBP|4155|myelin basic protein##CR627018|MBP|4155|myelin basic protein##AK128770|MBP|4155|myelin basic protein##BC068550|MBP|4155|myelin basic protein	0.938417	CTCF.p2:-16:0.938
chr22	37153782	37153900	reg1004955.p1	13.024	+	AB528094 AF096322 CU012974 CU013262 CU686936 HQ258186 CR456414 BC112297 BC112299 BC069612 NM_006078	-55187	-	TSC_hg19_v1_chr22_+_36960326 CU686937	-193480	+	TSC_hg19_v1_chr22_-_36925270 NM_003753	-228568	-	NM_001177702	10232	-	AL022729 TSC_hg19_v1_chr22_-_37172162 AK307105 AK307382 BC000566 AB209424 NM_001177701 NM_006860	18314	-	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	61678	-	AF096322|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CU012974|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CU013262|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##HQ258186|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CR456414|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC112297|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC112299|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC069612|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##NM_006078|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##NM_003753|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##NM_001177702|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AL022729|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307105|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307382|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC000566|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AB209424|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177701|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_006860|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin	0.993838	CTCF.p2:-21:0.994
chr12	685377	685526	reg1006020.p1	13.023	+	AB089940 NM_173593	-115909	+	NM_001130146 NM_032358 AK293165 TSC_hg19_v1_chr12_+_510809 AK027638	-174670	+	TSC_hg19_v1_chr12_-_498451 AK301150 AK301273 AB209999 BC048307 BC053893 NM_001042603 BC092417	-186849	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	66727	+	TSC_hg19_v1_chr12_-_752800 AK298043	67368	-	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	87264	-	AB089940|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_173593|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_001130146|CCDC77|84318|coiled-coil domain containing 77##NM_032358|CCDC77|84318|coiled-coil domain containing 77##AK293165|CCDC77|84318|coiled-coil domain containing 77##AK027638|CCDC77|84318|coiled-coil domain containing 77##AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A##AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A##AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A##BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A##BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A##NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A##BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2	0.999901	CTCF.p2:-5:1.000
chr1	7962920	7963026	reg1005071.p1	13.023	+	AF140630 BC126443 BC171734 NM_021995	-49453	-	AF104118 AY358375 NM_006786	-49875	-	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	-118148	+	TSC_hg19_v1_chr1_-_7973315 BC025776	10327	-	NM_001561	40251	-	TSC_hg19_v1_chr1_+_8021722 NM_001123377 NM_007262	58748	+	AF140630|UTS2|10911|urotensin 2##BC126443|UTS2|10911|urotensin 2##BC171734|UTS2|10911|urotensin 2##NM_021995|UTS2|10911|urotensin 2##AF104118|UTS2|10911|urotensin 2##AY358375|UTS2|10911|urotensin 2##NM_006786|UTS2|10911|urotensin 2##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)##BC025776|UTS2|10911|urotensin 2##NM_001561|TNFRSF9|3604|tumor necrosis factor receptor superfamily, member 9##NM_001123377|PARK7|11315|parkinson protein 7##NM_007262|PARK7|11315|parkinson protein 7	0.999315	CTCF.p2:30:0.999
chr1	9844735	9844865	reg1006246.p1	13.023	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	-132996	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-195844	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-245164	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	39095	-	TSC_hg19_v1_chr1_-_9884023 AK304813	39221	-	TSC_hg19_v1_chr1_-_9884024 BC033902	39244	-	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1	0.977929	CTCF.p2:-12:0.978
chr12	111040118	111040237	reg1004626.p1	13.022	+	AK124744 TSC_hg19_v1_chr12_-_111021124	-19051	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	-19107	-	TSC_hg19_v1_chr12_-_111020755 AY357944	-19384	-	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	11748	+	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	86781	-	AK293543 NM_001040107	87422	-	AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AY357944|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1	0.981615	CTCF.p2:21:0.982
chr13	78695757	78695875	reg1004737.p2	13.022	+	D90402 NM_000115 S57283 AF308156	-146100	-	AF114165 NM_001201397	-201914	-	AF114163 AF114164 TSC_hg19_v1_chr13_-_78493569	-202265	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	474466	+	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	481907	-	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	537477	-	D90402|EDNRB|1910|endothelin receptor type B##NM_000115|EDNRB|1910|endothelin receptor type B##S57283|EDNRB|1910|endothelin receptor type B##AF114165|EDNRB|1910|endothelin receptor type B##NM_001201397|EDNRB|1910|endothelin receptor type B##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219	0.994801	CTCF.p2:0:0.995
chr1	212803485	212803626	reg1007362.p1	13.020	+	AK301981 NM_153606 BC035007	-5754	+	NM_001206486 AB066566 AB078026 AB078027 AB528347 AY313926 AY313927 BT006996 CR450334 DQ892723 DQ895972 AB209032	-15148	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	-21448	+	AB463432 HQ258061 TSC_hg19_v1_chr1_-_212873132	69565	-	TSC_hg19_v1_chr1_-_212873221 BC117489 BC117491	69675	-	TSC_hg19_v1_chr1_-_212873317 AF255346 NM_018664	69765	-	AK301981|FAM71A|149647|family with sequence similarity 71, member A##NM_153606|FAM71A|149647|family with sequence similarity 71, member A##BC035007|FAM71A|149647|family with sequence similarity 71, member A##NM_001206486|ATF3|467|activating transcription factor 3##AB066566|ATF3|467|activating transcription factor 3##AB078026|ATF3|467|activating transcription factor 3##AB078027|ATF3|467|activating transcription factor 3##AY313926|ATF3|467|activating transcription factor 3##AY313927|ATF3|467|activating transcription factor 3##BT006996|ATF3|467|activating transcription factor 3##CR450334|ATF3|467|activating transcription factor 3##DQ892723|ATF3|467|activating transcription factor 3##DQ895972|ATF3|467|activating transcription factor 3##AB209032|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3##HQ258061|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117489|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117491|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##AF255346|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##NM_018664|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3	0.0	
chr7	100449729	100449885	reg1006005.p1	13.020	+	TSC_hg19_v1_chr7_-_100425146 NM_004444	-24715	-	AF332975 AF332976 AF332977 AF332978 AF332979 AF332980 NM_003386 NM_173059	-118559	+	NM_000799 X02157 BC093628 BC111937 BC143225 AB463610 JN849371	-131295	+	TSC_hg19_v1_chr7_+_100450340 AK301411	533	+	NM_020246 BC000154 TSC_hg19_v1_chr7_+_100450361	557	+	AF284422 TSC_hg19_v1_chr7_+_100450374 AK128873 AB033284	586	+	NM_004444|EPHB4|2050|EPH receptor B4##AF332975|ZAN|7455|zonadhesin##AF332976|ZAN|7455|zonadhesin##AF332977|ZAN|7455|zonadhesin##AF332978|ZAN|7455|zonadhesin##AF332979|ZAN|7455|zonadhesin##AF332980|ZAN|7455|zonadhesin##NM_003386|ZAN|7455|zonadhesin##NM_173059|ZAN|7455|zonadhesin##NM_000799|EPO|2056|erythropoietin##X02157|EPO|2056|erythropoietin##BC093628|EPO|2056|erythropoietin##BC111937|EPO|2056|erythropoietin##BC143225|EPO|2056|erythropoietin##JN849371|EPO|2056|erythropoietin##AK301411|SLC12A9|56996|solute carrier family 12 (potassium/chloride transporters), member 9##NM_020246|SLC12A9|56996|solute carrier family 12 (potassium/chloride transporters), member 9##BC000154|SLC12A9|56996|solute carrier family 12 (potassium/chloride transporters), member 9##AF284422|SLC12A9|56996|solute carrier family 12 (potassium/chloride transporters), member 9##AK128873|SLC12A9|56996|solute carrier family 12 (potassium/chloride transporters), member 9##AB033284|SLC12A9|56996|solute carrier family 12 (potassium/chloride transporters), member 9	0.886924	CTCF.p2:23:0.887
chr7	129712132	129712263	reg1006334.p1	13.019	+	TSC_hg19_v1_chr7_+_129710580 BC009977	-1598	+	TSC_hg19_v1_chr7_+_129710402 D87454	-1764	+	TSC_hg19_v1_chr7_+_129710381 BC044884 NM_014997 BC036464	-1837	+	TSC_hg19_v1_chr7_-_129845244 AK027678 BC057784 AK027709 BC045618 AK074732 NM_032842	133079	-	BC017587 NM_145268 AK097635	135511	+	BC007009 NM_001869 BC014571 BC015140 AK293378 U19977 DQ893811 CU675491 BT007403	194517	+	BC009977|KLHDC10|23008|kelch domain containing 10##D87454|KLHDC10|23008|kelch domain containing 10##BC044884|KLHDC10|23008|kelch domain containing 10##NM_014997|KLHDC10|23008|kelch domain containing 10##BC036464|KLHDC10|23008|kelch domain containing 10##AK027678|TMEM209|84928|transmembrane protein 209##BC057784|TMEM209|84928|transmembrane protein 209##AK027709|TMEM209|84928|transmembrane protein 209##BC045618|TMEM209|84928|transmembrane protein 209##AK074732|TMEM209|84928|transmembrane protein 209##NM_032842|TMEM209|84928|transmembrane protein 209##BC017587|C7orf45|136263|chromosome 7 open reading frame 45##NM_145268|C7orf45|136263|chromosome 7 open reading frame 45##AK097635|C7orf45|136263|chromosome 7 open reading frame 45##BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)##AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)##U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)##DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)##BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)	0.545206	CTCF.p2:-23:0.545
chr7	89782084	89782194	reg1004996.p2	13.018	+	BC028365 NM_152706	-1357109	-	BC140826 BC140829 AK056672 AY295769 NM_181646	-1393423	+	BC020600 AF423422 AF423423 AK026806 AK307644 TSC_hg19_v1_chr7_-_87936207 NM_001205315 NM_001205316 NM_024636	-1845925	-	NM_012449 TSC_hg19_v1_chr7_+_89783782 AK308452 BC011802	1598	+	AK304076 TSC_hg19_v1_chr7_+_89783791 AF186249	1673	+	AF455138 NM_001244944 NM_001244945 NM_152999 AK092666 AX747660 TSC_hg19_v1_chr7_+_89841171 AY008443 AY008444 AY008445 NM_001040665 NM_001244946 AK315043	58976	+	BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62##BC140826|ZNF804B|219578|zinc finger protein 804B##BC140829|ZNF804B|219578|zinc finger protein 804B##AK056672|ZNF804B|219578|zinc finger protein 804B##AY295769|ZNF804B|219578|zinc finger protein 804B##NM_181646|ZNF804B|219578|zinc finger protein 804B##BC020600|STEAP4|79689|STEAP family member 4##AF423422|STEAP4|79689|STEAP family member 4##AF423423|STEAP4|79689|STEAP family member 4##AK026806|STEAP4|79689|STEAP family member 4##AK307644|STEAP4|79689|STEAP family member 4##NM_001205315|STEAP4|79689|STEAP family member 4##NM_001205316|STEAP4|79689|STEAP family member 4##NM_024636|STEAP4|79689|STEAP family member 4##NM_012449|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK308452|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC011802|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK304076|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF186249|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF455138|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244944|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244945|STEAP2|261729|STEAP family member 2, metalloreductase##NM_152999|STEAP2|261729|STEAP family member 2, metalloreductase##AK092666|STEAP2|261729|STEAP family member 2, metalloreductase##AY008443|STEAP2|261729|STEAP family member 2, metalloreductase##AY008444|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040665|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244946|STEAP2|261729|STEAP family member 2, metalloreductase##AK315043|STEAP2|261729|STEAP family member 2, metalloreductase	0.880617	CTCF.p2:-11:0.881
chr1	208002035	208002183	reg1007229.p1	13.017	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	-76626	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	-76716	+	NM_175710 BC109190 BC109191	-183622	+	BX640941 TSC_hg19_v1_chr1_-_208059392	57214	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	82274	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	82448	-	BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule	0.0	
chr19	7918214	7918371	reg1004563.p2	13.017	+	NM_001159944 AB449874	-6886	+	TSC_hg19_v1_chr19_+_7895113 NM_145245 BC014111	-23116	+	NM_001144904 NM_001144905 NM_001144906 NM_001144907 NM_001144908 NM_001144909 NM_001144910 NM_001144911 NM_014257 AK292278 BC038851 AF290887 AK304499 AK314704 AB015629 AF245219 AK298084 AK023750 BC110614 AY343913 DQ893779 AY042234 AY042235 AY042236 AY042237 AY042238 AY042239 AY042240	-90199	+	AL442075 TSC_hg19_v1_chr19_-_7934829	16525	-	NM_001190467 TSC_hg19_v1_chr19_-_7939337	21048	-	TSC_hg19_v1_chr19_+_7953422 AK091134 AX746798 BC070089 NM_025061 BX538180	35128	+	NM_001159944|EVI5L|115704|ecotropic viral integration site 5-like##AB449874|EVI5L|115704|ecotropic viral integration site 5-like##NM_145245|EVI5L|115704|ecotropic viral integration site 5-like##BC014111|EVI5L|115704|ecotropic viral integration site 5-like##NM_001144904|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144905|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144906|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144907|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144908|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144909|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144910|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144911|CLEC4M|10332|C-type lectin domain family 4, member M##NM_014257|CLEC4M|10332|C-type lectin domain family 4, member M##AK292278|CLEC4M|10332|C-type lectin domain family 4, member M##BC038851|CLEC4M|10332|C-type lectin domain family 4, member M##AF290887|CLEC4M|10332|C-type lectin domain family 4, member M##AK304499|CLEC4M|10332|C-type lectin domain family 4, member M##AK314704|CLEC4M|10332|C-type lectin domain family 4, member M##AB015629|CLEC4M|10332|C-type lectin domain family 4, member M##AF245219|CLEC4M|10332|C-type lectin domain family 4, member M##AK298084|CLEC4M|10332|C-type lectin domain family 4, member M##AK023750|CLEC4M|10332|C-type lectin domain family 4, member M##BC110614|CLEC4M|10332|C-type lectin domain family 4, member M##AY343913|CLEC4M|10332|C-type lectin domain family 4, member M##DQ893779|CLEC4M|10332|C-type lectin domain family 4, member M##AY042234|CLEC4M|10332|C-type lectin domain family 4, member M##AY042235|CLEC4M|10332|C-type lectin domain family 4, member M##AY042236|CLEC4M|10332|C-type lectin domain family 4, member M##AY042237|CLEC4M|10332|C-type lectin domain family 4, member M##AY042238|CLEC4M|10332|C-type lectin domain family 4, member M##AY042239|CLEC4M|10332|C-type lectin domain family 4, member M##AY042240|CLEC4M|10332|C-type lectin domain family 4, member M##AL442075|FLJ22184|80164|putative uncharacterized protein FLJ22184##NM_001190467|FLJ22184|80164|putative uncharacterized protein FLJ22184##AK091134|LRRC8E|80131|leucine rich repeat containing 8 family, member E##BC070089|LRRC8E|80131|leucine rich repeat containing 8 family, member E##NM_025061|LRRC8E|80131|leucine rich repeat containing 8 family, member E##BX538180|LRRC8E|80131|leucine rich repeat containing 8 family, member E	0.976338	CTCF.p2:8:0.976
chr2	175442840	175442960	reg1005095.p1	13.017	+	BC036681 AK091200 AK315125 AX746845 BC028730 AL834154 TSC_hg19_v1_chr2_-_175351812 AK307896 BX537947 NM_001033045 NM_152529 BC035037	-91103	-	BC119684 BC119685 BC119685 TSC_hg19_v1_chr2_+_175260519	-182342	+	TSC_hg19_v1_chr2_+_175260466 NM_001193528 NM_024583 AK296558 AK295357 AK295357 AK057912 AK057912 BC007344	-182423	+	TSC_hg19_v1_chr2_-_175462533 BC002914 X86019	19581	-	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	56397	-	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	104854	-	BC036681|GPR155|151556|G protein-coupled receptor 155##AK091200|GPR155|151556|G protein-coupled receptor 155##AK315125|GPR155|151556|G protein-coupled receptor 155##BC028730|GPR155|151556|G protein-coupled receptor 155##AL834154|GPR155|151556|G protein-coupled receptor 155##AK307896|GPR155|151556|G protein-coupled receptor 155##BX537947|GPR155|151556|G protein-coupled receptor 155##NM_001033045|GPR155|151556|G protein-coupled receptor 155##NM_152529|GPR155|151556|G protein-coupled receptor 155##BC035037|GPR155|151556|G protein-coupled receptor 155##BC119684|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##NM_001193528|SCRN3|79634|secernin 3##NM_024583|SCRN3|79634|secernin 3##AK296558|SCRN3|79634|secernin 3##AK295357|SCRN3|79634|secernin 3##AK295357|SCRN3|79634|secernin 3##AK057912|SCRN3|79634|secernin 3##AK057912|SCRN3|79634|secernin 3##BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1##X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1##AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1	0.908229	CTCF.p2:-23:0.908
chr5	121751315	121751445	reg1005162.p1	13.017	+	TSC_hg19_v1_chr5_+_121647890 DQ227317 NM_001242935 NM_005460 BC094759 BC040552 AK304646 AK310835 AF076929 BC033743	-103522	+	AK299687 TSC_hg19_v1_chr5_+_121647434	-103968	+	NM_001195535	-255510	+	BC029465 TSC_hg19_v1_chr5_-_121814783	63403	-	TSC_hg19_v1_chr5_+_122110737 AK023716 NM_003100	359364	+	AK023581 TSC_hg19_v1_chr5_+_122110776 BC003382 AF065482 AK222968	359389	+	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein##NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein##NM_005460|SNCAIP|9627|synuclein, alpha interacting protein##BC094759|SNCAIP|9627|synuclein, alpha interacting protein##BC040552|SNCAIP|9627|synuclein, alpha interacting protein##AK304646|SNCAIP|9627|synuclein, alpha interacting protein##AK310835|SNCAIP|9627|synuclein, alpha interacting protein##AF076929|SNCAIP|9627|synuclein, alpha interacting protein##BC033743|SNCAIP|9627|synuclein, alpha interacting protein##AK299687|SNCAIP|9627|synuclein, alpha interacting protein##NM_001195535|LOC100505841|100505841|zinc finger protein 474-like##AK023716|SNX2|6643|sorting nexin 2##NM_003100|SNX2|6643|sorting nexin 2##AK023581|SNX2|6643|sorting nexin 2##BC003382|SNX2|6643|sorting nexin 2##AF065482|SNX2|6643|sorting nexin 2##AK222968|SNX2|6643|sorting nexin 2	0.298866	CTCF.p2:15:0.280
chr1	94947146	94947281	reg1006570.p1	13.016	+	AK296791 TSC_hg19_v1_chr1_+_94883971 AK302714 AK308159 BC068509 BC009712 X58528 AB529219 CU679455 BT006644 M81182	-63212	+	TSC_hg19_v1_chr1_+_94883966 NM_001122674 NM_002858	-63265	+	TSC_hg19_v1_chr1_-_94703252 BC067839 NM_004815	-243934	-	AF497569 AF497570 BT019808 CR541792 AB528376 AF487337 DQ892755 M16553 TSC_hg19_v1_chr1_-_95007316 M27436 J02931 AK312638 AK310918 AY940729 BC011029 NM_001178096 NM_001993	60062	-	NM_001114106 AK303906 TSC_hg19_v1_chr1_+_95285935 BC033858 AX721168 AK301288 AK316123 AK313574	338741	+	NM_152369 TSC_hg19_v1_chr1_+_95286156 BC053877	338929	+	AK296791|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK302714|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK308159|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC068509|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC009712|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##X58528|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BT006644|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##M81182|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_001122674|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_002858|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC067839|ARHGAP29|9411|Rho GTPase activating protein 29##NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29##AF497569|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF497570|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BT019808|F3|2152|coagulation factor III (thromboplastin, tissue factor)##CR541792|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF487337|F3|2152|coagulation factor III (thromboplastin, tissue factor)##DQ892755|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M16553|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M27436|F3|2152|coagulation factor III (thromboplastin, tissue factor)##J02931|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK312638|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK310918|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AY940729|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BC011029|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001178096|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001993|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001114106|SLC44A3|126969|solute carrier family 44, member 3##AK303906|SLC44A3|126969|solute carrier family 44, member 3##BC033858|SLC44A3|126969|solute carrier family 44, member 3##AK301288|SLC44A3|126969|solute carrier family 44, member 3##AK316123|SLC44A3|126969|solute carrier family 44, member 3##AK313574|SLC44A3|126969|solute carrier family 44, member 3##NM_152369|SLC44A3|126969|solute carrier family 44, member 3##BC053877|SLC44A3|126969|solute carrier family 44, member 3	0.997185	CTCF.p2:-1:0.997
chr22	39702838	39702954	reg1006104.p1	13.016	+	NM_002608 X02811 TSC_hg19_v1_chr22_-_39640988 M12783	-61889	-	CR541807 CU013138 CU013426 AB590092 TSC_hg19_v1_chr22_-_39639984 CR456538 X02744	-62871	-	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	-65987	-	BC014017 BC013674 BC013861 BC015032 BC015767 BC088373 BC063662 BC071666 CR456566 BC006483 BC012146 BC012786 TSC_hg19_v1_chr22_-_39715629 AK092695 AK297711 AK315693 AX747675 BC008492 BC107711 D28415 NM_000967 NM_001033853	12743	-	TSC_hg19_v1_chr22_+_39745981 NM_004711 NM_145731 BC000731 AK295863 CR456590 AK289507 AB209372 CU013190 CU013478 AB587338 AJ002304 AJ002305 BT007135 CU674372	43009	+	AJ002303 NM_145738	57278	+	NM_002608|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02811|PDGFB|5155|platelet-derived growth factor beta polypeptide##M12783|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR541807|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013138|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013426|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR456538|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02744|PDGFB|5155|platelet-derived growth factor beta polypeptide##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide##BC014017|RPL3|6122|ribosomal protein L3##BC013674|RPL3|6122|ribosomal protein L3##BC013861|RPL3|6122|ribosomal protein L3##BC015032|RPL3|6122|ribosomal protein L3##BC015767|RPL3|6122|ribosomal protein L3##BC088373|RPL3|6122|ribosomal protein L3##BC063662|RPL3|6122|ribosomal protein L3##BC071666|RPL3|6122|ribosomal protein L3##CR456566|RPL3|6122|ribosomal protein L3##BC006483|RPL3|6122|ribosomal protein L3##BC012146|RPL3|6122|ribosomal protein L3##BC012786|RPL3|6122|ribosomal protein L3##AK092695|RPL3|6122|ribosomal protein L3##AK297711|RPL3|6122|ribosomal protein L3##AK315693|RPL3|6122|ribosomal protein L3##BC008492|RPL3|6122|ribosomal protein L3##BC107711|RPL3|6122|ribosomal protein L3##NM_000967|RPL3|6122|ribosomal protein L3##NM_001033853|RPL3|6122|ribosomal protein L3##NM_004711|SYNGR1|9145|synaptogyrin 1##NM_145731|SYNGR1|9145|synaptogyrin 1##BC000731|SYNGR1|9145|synaptogyrin 1##AK295863|SYNGR1|9145|synaptogyrin 1##CR456590|SYNGR1|9145|synaptogyrin 1##AK289507|SYNGR1|9145|synaptogyrin 1##CU013190|SYNGR1|9145|synaptogyrin 1##CU013478|SYNGR1|9145|synaptogyrin 1##AJ002304|SYNGR1|9145|synaptogyrin 1##AJ002305|SYNGR1|9145|synaptogyrin 1##BT007135|SYNGR1|9145|synaptogyrin 1##AJ002303|SYNGR1|9145|synaptogyrin 1##NM_145738|SYNGR1|9145|synaptogyrin 1	0.296587	CTCF.p2:9:0.297
chr4	26063018	26063142	reg1005611.p1	13.016	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-147216	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-198526	-	NM_001177999 AK314514	-404990	+	L07875 BC020780 NM_005349 NM_203283	258239	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	259229	+	TSC_hg19_v1_chr4_+_26322635 AK302230	259556	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.223892	CTCF.p2:-18:0.224
chr7	114505763	114505900	reg1006106.p1	13.016	+	AF467253 NM_001172767 NM_148899 U80741 AF467258 AF467259 TSC_hg19_v1_chr7_+_114066703	-439201	+	TSC_hg19_v1_chr7_+_114055253 AF493430 AF337817 AF467257 BC126104 BC143866 BC143867	-450526	+	AK296957 TSC_hg19_v1_chr7_+_114055213	-450639	+	TSC_hg19_v1_chr7_+_114562148 AF054589 NM_001166345 NM_001166346 NM_199072	56343	+	BC040713 TSC_hg19_v1_chr7_+_114562979 AY196485	57125	+	AJ608795 NM_001244583	1102535	-	AF467253|FOXP2|93986|forkhead box P2##NM_001172767|FOXP2|93986|forkhead box P2##NM_148899|FOXP2|93986|forkhead box P2##AF467258|FOXP2|93986|forkhead box P2##AF467259|FOXP2|93986|forkhead box P2##AF493430|FOXP2|93986|forkhead box P2##AF337817|FOXP2|93986|forkhead box P2##AF467257|FOXP2|93986|forkhead box P2##BC126104|FOXP2|93986|forkhead box P2##BC143866|FOXP2|93986|forkhead box P2##BC143867|FOXP2|93986|forkhead box P2##AK296957|FOXP2|93986|forkhead box P2##AF054589|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166345|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166346|MDFIC|29969|MyoD family inhibitor domain containing##NM_199072|MDFIC|29969|MyoD family inhibitor domain containing##BC040713|MDFIC|29969|MyoD family inhibitor domain containing##AY196485|MDFIC|29969|MyoD family inhibitor domain containing##AJ608795|TFEC|22797|transcription factor EC##NM_001244583|TFEC|22797|transcription factor EC	0.99306	CTCF.p2:-20:0.993
chr9	17462975	17463105	reg1006515.p1	13.016	+	TSC_hg19_v1_chr9_+_17134988 AK303973 AK308837 BX647069 AK098502 NM_001114395 NM_017738	-328023	+	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	-592274	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	-592373	-	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	116056	+	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	1011048	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	1011143	+	AK303973|CNTLN|54875|centlein, centrosomal protein##AK308837|CNTLN|54875|centlein, centrosomal protein##BX647069|CNTLN|54875|centlein, centrosomal protein##AK098502|CNTLN|54875|centlein, centrosomal protein##NM_001114395|CNTLN|54875|centlein, centrosomal protein##NM_017738|CNTLN|54875|centlein, centrosomal protein##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1	0.999876	CTCF.p2:13:1.000
chr18	9073711	9073840	reg1003777.p1	13.015	+	AB384528 TSC_hg19_v1_chr18_+_8718600	-355251	+	AK131528 NM_015210	-356407	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	-464029	+	TSC_hg19_v1_chr18_+_9102620 NM_021074	28847	+	TSC_hg19_v1_chr18_+_9102715 AK312129 BC001632 BC017487 M22538 AK291865 AB590136 BC071689 DQ892593 DQ895813 CR456928	28945	+	TSC_hg19_v1_chr18_+_9136811 NM_001083625 NM_015208 BC070234 AK024808 AY373757 BC057225 AL834204	63016	+	AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165##NM_021074|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK312129|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC001632|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC017487|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##M22538|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK291865|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC071689|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ892593|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ895813|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##CR456928|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##NM_001083625|ANKRD12|23253|ankyrin repeat domain 12##NM_015208|ANKRD12|23253|ankyrin repeat domain 12##BC070234|ANKRD12|23253|ankyrin repeat domain 12##AK024808|ANKRD12|23253|ankyrin repeat domain 12##AY373757|ANKRD12|23253|ankyrin repeat domain 12##BC057225|ANKRD12|23253|ankyrin repeat domain 12##AL834204|ANKRD12|23253|ankyrin repeat domain 12	0.996309	CTCF.p2:0:0.996
chr8	96902909	96903043	reg1004714.p1	13.015	+	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	-621511	-	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	-621925	+	TSC_hg19_v1_chr8_+_96146116 AK023249	-756840	+	BC127948 BC127947 AJ537424 NM_001001557	270005	-	CR542176 CR542196 TSC_hg19_v1_chr8_-_97247774 AK307085 NM_001199975 BC041005 AK295007 AK311756 M22348 X13585 M26700 BC005230 NM_006294	344833	-	BC012995 NM_015942 TSC_hg19_v1_chr8_-_97273837 AK309002	370841	-	BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6##CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_001199975|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC012995|MTERFD1|51001|MTERF domain containing 1##NM_015942|MTERFD1|51001|MTERF domain containing 1##AK309002|MTERFD1|51001|MTERF domain containing 1	0.99996	CTCF.p2:-2:1.000
chr9	97545457	97545593	reg1006293.p1	13.015	+	NM_001193329 AJ560639	-23528	+	BC029616 TSC_hg19_v1_chr9_+_97488999	-56522	+	TSC_hg19_v1_chr9_+_97488980 NM_001193331 NM_032823 AK296782 AK057450	-56563	+	AK298959 TSC_hg19_v1_chr9_+_97766501 AK300486	220950	+	X66894 NM_001243743	533995	-	AK312548 AK222871 TSC_hg19_v1_chr9_-_98079974 BC015748 X66893 AK304887 NM_000136 NM_001243744	534406	-	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3##AJ560639|C9orf3|84909|chromosome 9 open reading frame 3##BC029616|C9orf3|84909|chromosome 9 open reading frame 3##NM_001193331|C9orf3|84909|chromosome 9 open reading frame 3##NM_032823|C9orf3|84909|chromosome 9 open reading frame 3##AK296782|C9orf3|84909|chromosome 9 open reading frame 3##AK057450|C9orf3|84909|chromosome 9 open reading frame 3##AK298959|C9orf3|84909|chromosome 9 open reading frame 3##AK300486|C9orf3|84909|chromosome 9 open reading frame 3##X66894|FANCC|2176|Fanconi anemia, complementation group C##NM_001243743|FANCC|2176|Fanconi anemia, complementation group C##AK312548|FANCC|2176|Fanconi anemia, complementation group C##AK222871|FANCC|2176|Fanconi anemia, complementation group C##BC015748|FANCC|2176|Fanconi anemia, complementation group C##X66893|FANCC|2176|Fanconi anemia, complementation group C##AK304887|FANCC|2176|Fanconi anemia, complementation group C##NM_000136|FANCC|2176|Fanconi anemia, complementation group C##NM_001243744|FANCC|2176|Fanconi anemia, complementation group C	0.985204	CTCF.p2:-15:0.985
chr17	17343442	17343559	reg1006730.p1	13.014	+	NM_001243312	-20843	+	TSC_hg19_v1_chr17_+_17206686 AF210652 NM_020201 BC035838	-136835	+	TSC_hg19_v1_chr17_-_17184612 BC001891 NM_003653	-158895	-	TSC_hg19_v1_chr17_+_17380313 AK001055 NM_018019 BC000647 BC010906 BC104988 BC112029 AB463869	36815	+	TSC_hg19_v1_chr17_+_17398334 CU676147	54886	+	AB528221 AF153192 AF498923 AM392981 AM393158 AM393716 CU676146 AF172846 AF069506 BC042688 AF177335 TSC_hg19_v1_chr17_-_17399710 BC018041 AK294073 AK312796 NM_001199989 NM_016084	56102	-	NM_001243312|SMCR9|140776|Smith-Magenis syndrome chromosome region, candidate 9##AF210652|NT5M|56953|5',3'-nucleotidase, mitochondrial##NM_020201|NT5M|56953|5',3'-nucleotidase, mitochondrial##BC035838|NT5M|56953|5',3'-nucleotidase, mitochondrial##BC001891|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##NM_003653|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AK001055|MED9|55090|mediator complex subunit 9##NM_018019|MED9|55090|mediator complex subunit 9##BC000647|MED9|55090|mediator complex subunit 9##BC010906|MED9|55090|mediator complex subunit 9##BC104988|MED9|55090|mediator complex subunit 9##BC112029|MED9|55090|mediator complex subunit 9##AF153192|RASD1|51655|RAS, dexamethasone-induced 1##AF498923|RASD1|51655|RAS, dexamethasone-induced 1##AM392981|RASD1|51655|RAS, dexamethasone-induced 1##AM393158|RASD1|51655|RAS, dexamethasone-induced 1##AM393716|RASD1|51655|RAS, dexamethasone-induced 1##AF172846|RASD1|51655|RAS, dexamethasone-induced 1##AF069506|RASD1|51655|RAS, dexamethasone-induced 1##BC042688|RASD1|51655|RAS, dexamethasone-induced 1##AF177335|RASD1|51655|RAS, dexamethasone-induced 1##BC018041|RASD1|51655|RAS, dexamethasone-induced 1##AK294073|RASD1|51655|RAS, dexamethasone-induced 1##AK312796|RASD1|51655|RAS, dexamethasone-induced 1##NM_001199989|RASD1|51655|RAS, dexamethasone-induced 1##NM_016084|RASD1|51655|RAS, dexamethasone-induced 1	0.0	
chr7	31776119	31776241	reg1005383.p1	13.014	+	NM_001145123 NM_006658	-49550	+	AK128026 NM_194300	-219203	+	AK055238 AF248954 NM_022728	-395658	-	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	334325	-	AK094180 NM_001191059 U40371 NM_005020	334831	-	NM_001191058	562202	-	NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129##AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191058|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	0.992636	CTCF.p2:9:0.993
chr1	155034093	155034221	reg1005545.p1	13.013	+	TSC_hg19_v1_chr1_+_155023819 AK308172 AK295614 AK296925 AK297468 U41767 EU176173 AB590397 AY518542 BT009764 U46005	-10321	+	BC014566 TSC_hg19_v1_chr1_+_155023791 AK075498	-10365	+	TSC_hg19_v1_chr1_+_155023771 AK000667 AY560593 AY560594 AY560595 AY560596 AY560597 AY560598 AY560599 AY560600 AY560601 AY576417 NM_003815 NM_207191 NM_207194 NM_207195 NM_207196 NM_207197	-10398	+	TSC_hg19_v1_chr1_+_155036206 NM_005227 NM_182689 NM_182690 BC107483 AK301966 AJ006352 AJ006353 U14188 CR533569	2093	+	TSC_hg19_v1_chr1_+_155051392 BC017722 NM_004952 BC110406 U14187 AK296030 AK316248 L37360 DQ891668 DQ894854	17183	+	AK057845 TSC_hg19_v1_chr1_+_155099946	65784	+	AK308172|ADAM15|8751|ADAM metallopeptidase domain 15##AK295614|ADAM15|8751|ADAM metallopeptidase domain 15##AK296925|ADAM15|8751|ADAM metallopeptidase domain 15##AK297468|ADAM15|8751|ADAM metallopeptidase domain 15##U41767|ADAM15|8751|ADAM metallopeptidase domain 15##EU176173|ADAM15|8751|ADAM metallopeptidase domain 15##AY518542|ADAM15|8751|ADAM metallopeptidase domain 15##BT009764|ADAM15|8751|ADAM metallopeptidase domain 15##U46005|ADAM15|8751|ADAM metallopeptidase domain 15##BC014566|ADAM15|8751|ADAM metallopeptidase domain 15##AK075498|ADAM15|8751|ADAM metallopeptidase domain 15##AK000667|ADAM15|8751|ADAM metallopeptidase domain 15##AY560593|ADAM15|8751|ADAM metallopeptidase domain 15##AY560594|ADAM15|8751|ADAM metallopeptidase domain 15##AY560595|ADAM15|8751|ADAM metallopeptidase domain 15##AY560596|ADAM15|8751|ADAM metallopeptidase domain 15##AY560597|ADAM15|8751|ADAM metallopeptidase domain 15##AY560598|ADAM15|8751|ADAM metallopeptidase domain 15##AY560599|ADAM15|8751|ADAM metallopeptidase domain 15##AY560600|ADAM15|8751|ADAM metallopeptidase domain 15##AY560601|ADAM15|8751|ADAM metallopeptidase domain 15##AY576417|ADAM15|8751|ADAM metallopeptidase domain 15##NM_003815|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207191|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207194|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207195|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207196|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207197|ADAM15|8751|ADAM metallopeptidase domain 15##NM_005227|EFNA4|1945|ephrin-A4##NM_182689|EFNA4|1945|ephrin-A4##NM_182690|EFNA4|1945|ephrin-A4##BC107483|EFNA4|1945|ephrin-A4##AJ006352|EFNA4|1945|ephrin-A4##AJ006353|EFNA4|1945|ephrin-A4##U14188|EFNA4|1945|ephrin-A4##CR533569|EFNA4|1945|ephrin-A4##BC017722|EFNA3|1944|ephrin-A3##NM_004952|EFNA3|1944|ephrin-A3##BC110406|EFNA3|1944|ephrin-A3##U14187|EFNA3|1944|ephrin-A3##AK296030|EFNA3|1944|ephrin-A3##AK316248|EFNA3|1944|ephrin-A3##L37360|EFNA3|1944|ephrin-A3##DQ891668|EFNA3|1944|ephrin-A3##DQ894854|EFNA3|1944|ephrin-A3##AK057845|EFNA1|1942|ephrin-A1	0.998735	CTCF.p2:-1:0.999
chr17	59489854	59489972	reg1005208.p2	13.012	+	BC046200 NM_203425	-802	+	TSC_hg19_v1_chr17_+_59477713 AL832900 AB209378	-12196	+	TSC_hg19_v1_chr17_+_59477477 U28049	-12417	+	BC142620 TSC_hg19_v1_chr17_+_59529788	39873	+	AF188703 NM_018488 BC136403 BC144062 AB464284	43915	+	CU687600 BC062710 NM_199290 TSC_hg19_v1_chr17_-_59668583	178649	-	BC046200|C17orf82|388407|chromosome 17 open reading frame 82##NM_203425|C17orf82|388407|chromosome 17 open reading frame 82##AL832900|TBX2|6909|T-box 2##AB209378|TBX2|6909|T-box 2##U28049|TBX2|6909|T-box 2##BC142620|TBX4|9496|T-box 4##AF188703|TBX4|9496|T-box 4##NM_018488|TBX4|9496|T-box 4##BC136403|TBX4|9496|T-box 4##BC144062|TBX4|9496|T-box 4##BC062710|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##NM_199290|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2	0.966341	CTCF.p2:-5:0.966
chr2	153484002	153484109	reg1004686.p1	13.012	+	BC113878 BC114438 TSC_hg19_v1_chr2_+_153191857 AB067489 BC167159 AB385514	-292082	+	TSC_hg19_v1_chr2_+_153191687 NM_052905	-292385	+	TSC_hg19_v1_chr2_-_153032266 AB463258 AM393419 CU688564 DQ892427 DQ895641 AK292265 AK292847 AK310863 AF042273 AF042274 AL133600 BC022277 BC028740 NM_005843	-451705	-	TSC_hg19_v1_chr2_-_153573924 U70667 AF049524 AF049528 BC000273 BC073138 BC011788 AF049523 AK298547 AK024810 BC029414 NM_017892	89865	-	TSC_hg19_v1_chr2_+_153574392 NM_152522 AK023109	90393	+	TSC_hg19_v1_chr2_+_153575123 AK315657	91060	+	BC113878|FMNL2|114793|formin-like 2##BC114438|FMNL2|114793|formin-like 2##AB067489|FMNL2|114793|formin-like 2##BC167159|FMNL2|114793|formin-like 2##NM_052905|FMNL2|114793|formin-like 2##AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_152522|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK023109|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK315657|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6	0.07013	
chr1	16118644	16118771	reg1005018.p2	13.011	+	NM_001024216 AB463637 DQ891730 DQ894907 AY180161	-27239	+	AF459643 NM_001024215 AK027444	-27696	+	TSC_hg19_v1_chr1_+_16085245 NM_017556	-33430	+	TSC_hg19_v1_chr1_-_16134192 NM_001089591	15485	-	BC012991 TSC_hg19_v1_chr1_-_16161389	42627	-	TSC_hg19_v1_chr1_-_16162350 AK094772	43649	-	NM_001024216|FBLIM1|54751|filamin binding LIM protein 1##DQ891730|FBLIM1|54751|filamin binding LIM protein 1##DQ894907|FBLIM1|54751|filamin binding LIM protein 1##AY180161|FBLIM1|54751|filamin binding LIM protein 1##AF459643|FBLIM1|54751|filamin binding LIM protein 1##NM_001024215|FBLIM1|54751|filamin binding LIM protein 1##AK027444|FBLIM1|54751|filamin binding LIM protein 1##NM_017556|FBLIM1|54751|filamin binding LIM protein 1##NM_001089591|UQCRHL|440567|ubiquinol-cytochrome c reductase hinge protein-like##AK094772|FLJ37453|729614|uncharacterized LOC729614	0.999412	CTCF.p2:-8:0.999
chr14	54642165	54642315	reg1006839.p1	13.011	+	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	-218707	-	NM_130851	-220971	-	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-1022190	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	221481	+	TSC_hg19_v1_chr14_-_54908095 BX248284 AY358635 AK074781 AK307074 AK311897 AF070654 AF104398 NM_005776 BC103741	265876	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	313445	-	BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##NM_130851|BMP4|652|bone morphogenetic protein 4##NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BX248284|CNIH|10175|cornichon homolog (Drosophila)##AY358635|CNIH|10175|cornichon homolog (Drosophila)##AK074781|CNIH|10175|cornichon homolog (Drosophila)##AK307074|CNIH|10175|cornichon homolog (Drosophila)##AK311897|CNIH|10175|cornichon homolog (Drosophila)##AF070654|CNIH|10175|cornichon homolog (Drosophila)##AF104398|CNIH|10175|cornichon homolog (Drosophila)##NM_005776|CNIH|10175|cornichon homolog (Drosophila)##BC103741|CNIH|10175|cornichon homolog (Drosophila)##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta	0.999189	CTCF.p2:0:0.999
chr5	10284230	10284377	reg1006336.p1	13.011	+	TSC_hg19_v1_chr5_+_10250440 DQ892743 DQ895989 AB383748 BC002971	-33853	+	TSC_hg19_v1_chr5_+_10250410 D43950 BC006543 AK293437 AK303147 AK289353	-33881	+	AK303086 TSC_hg19_v1_chr5_+_10250407	-33898	+	BC001573 TSC_hg19_v1_chr5_-_10307978 AJ278125 AK074197	23628	-	NM_138809	23864	-	TSC_hg19_v1_chr5_-_10353712 BC032907	69410	-	DQ892743|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##DQ895989|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##BC002971|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##D43950|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##BC006543|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK293437|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK303147|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK289353|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK303086|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##BC001573|CMBL|134147|carboxymethylenebutenolidase homolog (Pseudomonas)##AJ278125|CMBL|134147|carboxymethylenebutenolidase homolog (Pseudomonas)##AK074197|CMBL|134147|carboxymethylenebutenolidase homolog (Pseudomonas)##NM_138809|CMBL|134147|carboxymethylenebutenolidase homolog (Pseudomonas)	0.998869	CTCF.p2:-11:0.999
chr6	2791559	2791680	reg1005078.p2	13.011	+	TSC_hg19_v1_chr6_+_2766228 AF218313	-25363	+	TSC_hg19_v1_chr6_+_2765755 AK315471 BC018923 AK094823 AK223593 DQ891950 DQ895136 AB209723	-25753	+	TSC_hg19_v1_chr6_+_2765645 AB056152 NM_020135 NM_130395	-25980	+	TSC_hg19_v1_chr6_-_2840686 BT006928 AB590702	49133	-	TSC_hg19_v1_chr6_-_2842095 BC009015 NM_030666 M93056 AK298044 AK312973 AK223370 AK291327	50463	-	TSC_hg19_v1_chr6_-_2842202 AK304641 AK309765	50578	-	AF218313|WRNIP1|56897|Werner helicase interacting protein 1##AK315471|WRNIP1|56897|Werner helicase interacting protein 1##BC018923|WRNIP1|56897|Werner helicase interacting protein 1##AK094823|WRNIP1|56897|Werner helicase interacting protein 1##AK223593|WRNIP1|56897|Werner helicase interacting protein 1##DQ891950|WRNIP1|56897|Werner helicase interacting protein 1##DQ895136|WRNIP1|56897|Werner helicase interacting protein 1##AB209723|WRNIP1|56897|Werner helicase interacting protein 1##AB056152|WRNIP1|56897|Werner helicase interacting protein 1##NM_020135|WRNIP1|56897|Werner helicase interacting protein 1##NM_130395|WRNIP1|56897|Werner helicase interacting protein 1##BT006928|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK304641|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK309765|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1	0.12333	
chr16	31345129	31345269	reg1006802.p1	13.010	+	TSC_hg19_v1_chr16_+_31271330 AK127637 AB384734	-73845	+	TSC_hg19_v1_chr16_+_31271311 J03925 BC096346 BC096347 BC096348 BC099660	-73882	+	TSC_hg19_v1_chr16_+_31271295 AK057856 NM_000632 NM_001145808 M18044	-73906	+	TSC_hg19_v1_chr16_+_31366508 AK296666 AK309642 NM_000887	21293	+	TSC_hg19_v1_chr16_+_31366521 M81695	21323	+	TSC_hg19_v1_chr16_+_31366549 BC037577 BC038237 DQ892486 DQ895697	21352	+	AK127637|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##J03925|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096346|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096347|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096348|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC099660|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##AK057856|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##NM_000632|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##NM_001145808|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##M18044|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##AK296666|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##AK309642|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##NM_000887|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##M81695|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##BC037577|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##BC038237|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ892486|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ895697|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)	0.034351	
chr2	109744549	109744700	reg1006390.p1	13.010	+	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	-138877	-	TSC_hg19_v1_chr2_-_109605623 AK296936	-139005	-	TSC_hg19_v1_chr2_+_109403228 BC050579 AK125199 AK057307 NM_144978 BC015847 BC038421	-341422	+	NM_001099289 DQ307286	1439	+	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	626857	-	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	627101	-	AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##AK296936|EDAR|10913|ectodysplasin A receptor##BC050579|CCDC138|165055|coiled-coil domain containing 138##AK125199|CCDC138|165055|coiled-coil domain containing 138##AK057307|CCDC138|165055|coiled-coil domain containing 138##NM_144978|CCDC138|165055|coiled-coil domain containing 138##BC015847|CCDC138|165055|coiled-coil domain containing 138##BC038421|CCDC138|165055|coiled-coil domain containing 138##NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10	0.997629	CTCF.p2:-13:0.998
chr22	36591075	36591192	reg1003540.p1	13.010	+	AY014906 AY014907 NM_145641 NM_145642	-28909	-	BC042918 BC038352 AK025349 AF070675 BC070144 AF305227 BC050596 AY014902 AY014903 AY014904 AY014905 NM_145640	-34255	-	AY072786 DQ778625 TSC_hg19_v1_chr22_-_36424553 AK055213 NM_001082578 NM_001082579	-166594	-	AK290466 BC006276 AK313637 AK311506 AY014914 AY014915 NM_030643 NM_145660	9685	-	AF305429 TSC_hg19_v1_chr22_-_36635617 BC004395 AF305225 AK303978 AB208990 AK056938	44458	-	TSC_hg19_v1_chr22_-_36635666 AF324223 NM_030882	44544	-	AY014906|APOL3|80833|apolipoprotein L, 3##AY014907|APOL3|80833|apolipoprotein L, 3##NM_145641|APOL3|80833|apolipoprotein L, 3##NM_145642|APOL3|80833|apolipoprotein L, 3##BC042918|APOL3|80833|apolipoprotein L, 3##BC038352|APOL3|80833|apolipoprotein L, 3##AK025349|APOL3|80833|apolipoprotein L, 3##AF070675|APOL3|80833|apolipoprotein L, 3##AF305227|APOL3|80833|apolipoprotein L, 3##BC050596|APOL3|80833|apolipoprotein L, 3##AY014902|APOL3|80833|apolipoprotein L, 3##AY014903|APOL3|80833|apolipoprotein L, 3##AY014904|APOL3|80833|apolipoprotein L, 3##AY014905|APOL3|80833|apolipoprotein L, 3##NM_145640|APOL3|80833|apolipoprotein L, 3##AY072786|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ778625|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK055213|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082578|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082579|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK290466|APOL4|80832|apolipoprotein L, 4##BC006276|APOL4|80832|apolipoprotein L, 4##AK313637|APOL4|80832|apolipoprotein L, 4##AK311506|APOL4|80832|apolipoprotein L, 4##AY014914|APOL4|80832|apolipoprotein L, 4##AY014915|APOL4|80832|apolipoprotein L, 4##NM_030643|APOL4|80832|apolipoprotein L, 4##NM_145660|APOL4|80832|apolipoprotein L, 4##AF305429|APOL2|23780|apolipoprotein L, 2##BC004395|APOL2|23780|apolipoprotein L, 2##AF305225|APOL2|23780|apolipoprotein L, 2##AK303978|APOL2|23780|apolipoprotein L, 2##AB208990|APOL2|23780|apolipoprotein L, 2##AK056938|APOL2|23780|apolipoprotein L, 2##AF324223|APOL2|23780|apolipoprotein L, 2##NM_030882|APOL2|23780|apolipoprotein L, 2	0.997588	CTCF.p2:-7:0.998
chr6	137592852	137592987	reg1004890.p2	13.010	+	TSC_hg19_v1_chr6_-_137540556 NM_000416	-52361	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-52374	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	-52407	-	BC051352 AK096362 NM_175747	222606	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	595618	+	TSC_hg19_v1_chr6_-_138189314 AK124173	596431	-	NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3	0.299906	CTCF.p2:-1:0.300
chr17	76081168	76081301	reg1006981.p1	13.009	+	BC039479 NM_001142640 NM_018996	-80952	+	TSC_hg19_v1_chr17_+_75543021 AK096234	-538214	+	AK056495 NM_001113495	-609910	+	TSC_hg19_v1_chr17_-_76124768 AK074065	43538	-	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	43604	-	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	45632	+	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK074065|TMC6|11322|transmembrane channel-like 6##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8	0.808053	CTCF.p2:-4:0.808
chr6	165341157	165341275	reg1005612.p1	13.009	+	AL050218 TSC_hg19_v1_chr6_+_163984651	-1356603	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	-1504984	+	TSC_hg19_v1_chr6_+_163835795 AF272349	-1505426	+	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	381876	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	734480	-	AY203946 TSC_hg19_v1_chr6_-_166076051	734836	-	AL050218|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##AY203946|LOC100132188|100132188|LP7097	0.999886	CTCF.p2:6:1.000
chr9	136647402	136647513	reg1004092.p1	13.009	+	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-42471	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-43979	-	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-145949	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	209989	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	285736	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	286169	-	BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3	0.997649	CTCF.p2:2:0.998
chr4	102651800	102651943	reg1007463.p1	13.008	+	BC098424 EU192652 NM_000944 NM_001130691 NM_001130692 TSC_hg19_v1_chr4_-_102268635 EU192653	-383241	-	AK290532 TSC_hg19_v1_chr4_-_102268547	-383356	-	TSC_hg19_v1_chr4_-_102268343 AL353950	-383499	-	NM_001127507 NM_017935 TSC_hg19_v1_chr4_+_102711808	59925	+	TSC_hg19_v1_chr4_+_102711886 BC032241 AK292133 AL834291 EU051376 AB587395	60064	+	NM_001083907 TSC_hg19_v1_chr4_+_102734998 AK000713	83137	+	BC098424|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##EU192652|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_000944|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001130691|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001130692|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##EU192653|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AK290532|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AL353950|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001127507|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_017935|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##BC032241|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK292133|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AL834291|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##EU051376|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	0.900589	CTCF.p2:0:0.901
chr6	97945747	97945860	reg1005502.p1	13.007	+	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	-214713	-	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	-573180	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-600039	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	1336777	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	1336869	+	TSC_hg19_v1_chr6_-_99395800 BC091484 BC032641	1449986	-	AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2##BC091484|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC032641|FBXL4|26235|F-box and leucine-rich repeat protein 4	0.38032	CTCF.p2:-4:0.380
chr20	39968744	39968873	reg1005049.p1	13.006	+	TSC_hg19_v1_chr20_-_39946149 AB007855	-22593	-	AK122905 AK097523 AB081948 BC047070 AK292415 NM_015035	-40085	-	TSC_hg19_v1_chr20_-_39766625 BC035080	-202200	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	707	+	AB089149 NM_052846	26689	-	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	278253	-	AB007855|ZHX3|23051|zinc fingers and homeoboxes 3##AK122905|ZHX3|23051|zinc fingers and homeoboxes 3##AK097523|ZHX3|23051|zinc fingers and homeoboxes 3##AB081948|ZHX3|23051|zinc fingers and homeoboxes 3##BC047070|ZHX3|23051|zinc fingers and homeoboxes 3##AK292415|ZHX3|23051|zinc fingers and homeoboxes 3##NM_015035|ZHX3|23051|zinc fingers and homeoboxes 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6	0.999199	CTCF.p2:6:0.999
chr5	80490968	80491112	reg1005460.p1	13.006	+	AF023130 AF181250 TSC_hg19_v1_chr5_+_80256561	-234481	+	TSC_hg19_v1_chr5_+_80256463 BC126112 BC136296 BC143870 NM_006909	-234558	+	TSC_hg19_v1_chr5_-_79950786 BC003584 BC071996 NM_000791	-540245	-	NM_001099735 NM_001099736 NM_001825 TSC_hg19_v1_chr5_+_80529140 AK313293 BC029140 AK122769	38108	+	TSC_hg19_v1_chr5_-_80597338 AK096014	106285	-	AK092460 TSC_hg19_v1_chr5_-_80597373 AK096680	106332	-	AF023130|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF181250|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC126112|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC136296|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC143870|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_006909|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC003584|DHFR|1719|dihydrofolate reductase##BC071996|DHFR|1719|dihydrofolate reductase##NM_000791|DHFR|1719|dihydrofolate reductase##NM_001099735|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001099736|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001825|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK313293|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##BC029140|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK122769|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK096014|LOC100131067|100131067|uncharacterized LOC100131067##AK092460|LOC100131067|100131067|uncharacterized LOC100131067##AK096680|LOC100131067|100131067|uncharacterized LOC100131067	0.994121	CTCF.p2:11:0.994
chr20	45825141	45825261	reg1004291.p1	13.004	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	-301649	+	TSC_hg19_v1_chr20_+_45523505 BC008803	-301693	+	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	-301919	+	TSC_hg19_v1_chr20_-_45927496 BC030721	102368	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	151446	-	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	160287	-	AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8	0.999576	CTCF.p2:-20:1.000
chr2	30064396	30064512	reg1004710.p1	13.004	+	TSC_hg19_v1_chr2_+_29338370 BC013862 NM_024692 AL834443	-726099	+	NM_001029883	-767328	-	AK296977 NM_199280	-860291	+	EU788003 EU788004 EU788005 EU788006 EU788007 EU788008 EU788009 EU788010 FJ838786 FJ838787 U62540 TSC_hg19_v1_chr2_-_30144453 AK296218 NM_004304	80000	-	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	305316	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	305379	+	BC013862|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_024692|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##AL834443|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71##AK296977|FAM179A|165186|family with sequence similarity 179, member A##NM_199280|FAM179A|165186|family with sequence similarity 179, member A##EU788003|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788004|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788005|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788006|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788007|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788008|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788009|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788010|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838786|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838787|ALK|238|anaplastic lymphoma receptor tyrosine kinase##U62540|ALK|238|anaplastic lymphoma receptor tyrosine kinase##AK296218|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_004304|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)	0.204164	
chr6	16771315	16771447	reg1005176.p1	13.004	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	-9684	-	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-532530	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-628071	+	NM_001190766	331107	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	510473	+	NM_001143941	510913	+	BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24##NM_001143941|RBM24|221662|RNA binding motif protein 24	0.979553	CTCF.p2:-1:0.980
chr14	71180825	71180972	reg1005225.p2	13.003	+	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	-72289	+	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	-113521	-	AB463868 BT006831 CR541697 TSC_hg19_v1_chr14_-_71067367	-113538	-	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	94911	-	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	193235	+	TSC_hg19_v1_chr14_+_71374441 BC140784	193553	+	D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9##AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##BT006831|MED6|10001|mediator complex subunit 6##CR541697|MED6|10001|mediator complex subunit 6##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##BC140784|PCNX|22990|pecanex homolog (Drosophila)	0.997711	CTCF.p2:19:0.998
chr19	8418958	8419079	reg1004905.p1	13.003	+	BC035849 TSC_hg19_v1_chr19_-_8408147 AB284126 AK097023 AK128815 BC066124 BC066775 NM_198471	-10883	-	TSC_hg19_v1_chr19_+_8386383 AB055779 AK293636 AK301638 AK311925 BC070217 NM_001031 BC070218 BC000354 BC018810 L05091 U58682 BC021239 DQ891357 DQ894538 CR457055	-32624	+	TSC_hg19_v1_chr19_-_8386300 BC003102 NM_005001	-32732	-	NM_001039667 NM_139314 TSC_hg19_v1_chr19_+_8429039 AB056477 AF202636 AK222489 AK303269 AK222524 AY358275 AF153606 BC023647 AF169312 CU692818	10089	+	TSC_hg19_v1_chr19_+_8455237 NM_004218 AK310573	36201	+	TSC_hg19_v1_chr19_+_8455246 AK312994	36233	+	BC035849|KANK3|256949|KN motif and ankyrin repeat domains 3##AB284126|KANK3|256949|KN motif and ankyrin repeat domains 3##AK128815|KANK3|256949|KN motif and ankyrin repeat domains 3##BC066124|KANK3|256949|KN motif and ankyrin repeat domains 3##BC066775|KANK3|256949|KN motif and ankyrin repeat domains 3##NM_198471|KANK3|256949|KN motif and ankyrin repeat domains 3##AK293636|RPS28|6234|ribosomal protein S28##AK301638|RPS28|6234|ribosomal protein S28##AK311925|RPS28|6234|ribosomal protein S28##BC070217|RPS28|6234|ribosomal protein S28##NM_001031|RPS28|6234|ribosomal protein S28##BC070218|RPS28|6234|ribosomal protein S28##BC000354|RPS28|6234|ribosomal protein S28##BC018810|RPS28|6234|ribosomal protein S28##L05091|RPS28|6234|ribosomal protein S28##U58682|RPS28|6234|ribosomal protein S28##BC021239|RPS28|6234|ribosomal protein S28##DQ891357|RPS28|6234|ribosomal protein S28##DQ894538|RPS28|6234|ribosomal protein S28##CR457055|RPS28|6234|ribosomal protein S28##BC003102|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##NM_005001|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##NM_001039667|ANGPTL4|51129|angiopoietin-like 4##NM_139314|ANGPTL4|51129|angiopoietin-like 4##AB056477|ANGPTL4|51129|angiopoietin-like 4##AF202636|ANGPTL4|51129|angiopoietin-like 4##AK222489|ANGPTL4|51129|angiopoietin-like 4##AK303269|ANGPTL4|51129|angiopoietin-like 4##AK222524|ANGPTL4|51129|angiopoietin-like 4##AY358275|ANGPTL4|51129|angiopoietin-like 4##AF153606|ANGPTL4|51129|angiopoietin-like 4##BC023647|ANGPTL4|51129|angiopoietin-like 4##AF169312|ANGPTL4|51129|angiopoietin-like 4##NM_004218|RAB11B|9230|RAB11B, member RAS oncogene family##AK312994|RAB11B|9230|RAB11B, member RAS oncogene family	0.999727	CTCF.p2:0:1.000
chr4	84181834	84181948	reg1005123.p2	13.003	+	TSC_hg19_v1_chr4_-_84035912 AK000140 NM_001130715 NM_016619	-145964	-	AF208846 EU570985 EU570986 TSC_hg19_v1_chr4_-_84035890 AJ422147	-146000	-	BC012205 NM_001130716	-150888	-	TSC_hg19_v1_chr4_-_84205924 DQ895928 EU176380 BC008804 AK023076	24024	-	TSC_hg19_v1_chr4_-_84205952 AK129583 AK300972 BC020728 AJ621061 NM_015697	24112	-	AJ627581 TSC_hg19_v1_chr4_-_84255962 AF084467 AM419200 AY948074 CU690802 AF152376 NM_001199830 AF165154 AK075400	74055	-	AK000140|PLAC8|51316|placenta-specific 8##NM_001130715|PLAC8|51316|placenta-specific 8##NM_016619|PLAC8|51316|placenta-specific 8##AF208846|PLAC8|51316|placenta-specific 8##EU570985|PLAC8|51316|placenta-specific 8##EU570986|PLAC8|51316|placenta-specific 8##AJ422147|PLAC8|51316|placenta-specific 8##BC012205|PLAC8|51316|placenta-specific 8##NM_001130716|PLAC8|51316|placenta-specific 8##DQ895928|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##EU176380|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC008804|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK023076|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK129583|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK300972|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC020728|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AJ621061|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##NM_015697|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AF084467|HPSE|10855|heparanase##AM419200|HPSE|10855|heparanase##AY948074|HPSE|10855|heparanase##AF152376|HPSE|10855|heparanase##NM_001199830|HPSE|10855|heparanase##AF165154|HPSE|10855|heparanase##AK075400|HPSE|10855|heparanase	0.317458	CTCF.p2:8:0.317
chr10	129948373	129948492	reg1004857.p1	13.002	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-23904	-	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	-102578	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-242977	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	1317039	+	TSC_hg19_v1_chr10_+_131265507 BC000824	1317082	+	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	1813621	-	NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3	0.997769	CTCF.p2:-2:0.998
chr14	75955240	75955363	reg1004465.p1	13.002	+	BC051303 NM_001135049	-56465	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	-60288	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	-60660	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	33489	+	TSC_hg19_v1_chr14_+_75988840 D42106	33551	+	NM_017791 AY260572 AY260577 BC019087 AK000378	89664	+	BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	0.999909	CTCF.p2:15:1.000
chr1	60165012	60165142	reg1003634.p1	13.002	+	NM_001244714 AK054842	-389324	+	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	-402465	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-915342	-	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	115575	+	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	227308	-	BC032594 TSC_hg19_v1_chr1_-_60392478	227392	-	NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2	0.178978	
chr17	37779789	37779927	reg1007037.p1	13.002	+	TSC_hg19_v1_chr17_-_37764168 BC022481 NM_006160	-15685	-	TSC_hg19_v1_chr17_+_37618267 AF227198 BC140854 AB462974	-161572	+	TSC_hg19_v1_chr17_+_37617760 NM_015083 NM_016507 AK302645	-162106	+	NM_032192 AF464196 TSC_hg19_v1_chr17_+_37783188	3326	+	TSC_hg19_v1_chr17_+_37783204 AK123112 AK127542 AK129537 AF435972	3351	+	AY070271 NM_001242464 NM_181505 AF435973 AF435974 AK024593 AK225058 BC001519	4903	+	BC022481|NEUROD2|4761|neurogenic differentiation 2##NM_006160|NEUROD2|4761|neurogenic differentiation 2##AF227198|CDK12|51755|cyclin-dependent kinase 12##BC140854|CDK12|51755|cyclin-dependent kinase 12##NM_015083|CDK12|51755|cyclin-dependent kinase 12##NM_016507|CDK12|51755|cyclin-dependent kinase 12##AK302645|CDK12|51755|cyclin-dependent kinase 12##NM_032192|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF464196|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK123112|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK127542|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK129537|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435972|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AY070271|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##NM_001242464|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##NM_181505|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435973|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435974|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK024593|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK225058|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##BC001519|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	0.907518	CTCF.p2:1:0.908
chr3	189685187	189685320	reg1005120.p2	13.002	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	-177735	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-335994	+	AK125682 NM_198485 BC101550 BC101552	-795442	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	153442	-	NM_018192	153654	-	NM_001134418	154972	-	AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##NM_001134418|LEPREL1|55214|leprecan-like 1	0.976123	CTCF.p2:-5:0.976
chr8	48227915	48228047	reg1006541.p1	13.001	+	TSC_hg19_v1_chr8_+_48173546 D63480 BC031627 AK293809 AK293972 AK294275 AK297681	-54441	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	-54449	+	TSC_hg19_v1_chr8_+_48173521 AK303579	-54462	+	EU831483 EU831570 TSC_hg19_v1_chr8_-_48650683	422703	-	TSC_hg19_v1_chr8_-_48650725 BC023510 BC105109 NM_005195 M83667	422755	-	TSC_hg19_v1_chr8_-_48872697 AK296833	644708	-	D63480|KIAA0146|23514|KIAA0146##AK293809|KIAA0146|23514|KIAA0146##AK293972|KIAA0146|23514|KIAA0146##AK294275|KIAA0146|23514|KIAA0146##AK297681|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##EU831483|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##EU831570|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##BC105109|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##NM_005195|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##M83667|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##AK296833|PRKDC|5591|protein kinase, DNA-activated, catalytic polypeptide	0.616313	CTCF.p2:15:0.616
chr1	40185808	40185934	reg1004877.p1	13.000	+	TSC_hg19_v1_chr1_-_40157103 BC030827 AL136591 NM_016257 AK294412 AK312314 AK294813	-28769	-	AF331801 AY028778 BC103879 BC103880 NM_032526	-48162	-	TSC_hg19_v1_chr1_-_40105343 NM_014571	-80526	-	NM_001195007 NM_006112 NM_203456 TSC_hg19_v1_chr1_+_40204553 AK313666 BC008451 AL833576 AF104012 AF104013 AK094660 AK304694 BC107736	18667	+	AK130628 TSC_hg19_v1_chr1_+_40204563 AK293094 BC004898 AB464008 CU678794 DQ160195	18696	+	AK314586 DQ893340 DQ896660 BC030015 AB050193 AK093089 AX747914 BC072388 AY013700 NM_022120	51101	-	BC030827|HPCAL4|51440|hippocalcin like 4##AL136591|HPCAL4|51440|hippocalcin like 4##NM_016257|HPCAL4|51440|hippocalcin like 4##AK294412|HPCAL4|51440|hippocalcin like 4##AK312314|HPCAL4|51440|hippocalcin like 4##AK294813|HPCAL4|51440|hippocalcin like 4##AF331801|NT5C1A|84618|5'-nucleotidase, cytosolic IA##AY028778|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC103879|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC103880|NT5C1A|84618|5'-nucleotidase, cytosolic IA##NM_032526|NT5C1A|84618|5'-nucleotidase, cytosolic IA##NM_014571|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##NM_001195007|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_006112|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_203456|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK313666|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC008451|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AL833576|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104012|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104013|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK094660|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK304694|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC107736|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK130628|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK293094|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC004898|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##DQ160195|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK314586|OXCT2|64064|3-oxoacid CoA transferase 2##DQ893340|OXCT2|64064|3-oxoacid CoA transferase 2##DQ896660|OXCT2|64064|3-oxoacid CoA transferase 2##BC030015|OXCT2|64064|3-oxoacid CoA transferase 2##AB050193|OXCT2|64064|3-oxoacid CoA transferase 2##AK093089|OXCT2|64064|3-oxoacid CoA transferase 2##BC072388|OXCT2|64064|3-oxoacid CoA transferase 2##AY013700|OXCT2|64064|3-oxoacid CoA transferase 2##NM_022120|OXCT2|64064|3-oxoacid CoA transferase 2	0.99618	CTCF.p2:4:0.996
chr2	72377581	72377713	reg1006448.p1	13.000	+	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	-2705	-	AK295683 TSC_hg19_v1_chr2_-_72371202	-6448	-	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-683754	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	675457	-	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	736883	+	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	767006	+	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1	0.271303	CTCF.p2:15:0.271
chr6	97345737	97345885	reg1006283.p1	13.000	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-47	-	TSC_hg19_v1_chr6_-_97345751 BC018802 AF161474	-59	-	HQ257923 TSC_hg19_v1_chr6_-_97345742 AF060508 AK311850 BC039464	-101	-	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	26812	+	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	385279	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	1936769	+	NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC018802|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF161474|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##HQ257923|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF060508|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK311850|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC039464|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2	0.062928	
chr17	38170104	38170227	reg1005706.p1	12.999	+	TSC_hg19_v1_chr17_+_38137216 AB385069 CU674020 CU676540 CU678776 CU680278 BT007217 CR456772	-32961	+	TSC_hg19_v1_chr17_+_38137115 BC000074 BC020518 BC025686 BC004859	-33023	+	TSC_hg19_v1_chr17_+_38137112 AK022896 AK298411	-33055	+	NM_000759 NM_001178147 NM_172219 NM_172220 AK290247 AK298116 M17706 AK313509 X03438 X03655 BC033245 AB591019 AB102881 CR541891	1505	+	TSC_hg19_v1_chr17_-_38210662 EU392536 EU392541 D50920 AK022508 AK303502 AK303745 AK291040 AK293309 AK299864 AK300992	40479	-	NM_001079518 NM_014815	40723	-	BT007217|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##CR456772|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC000074|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC020518|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC025686|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC004859|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK022896|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK298411|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##NM_000759|CSF3|1440|colony stimulating factor 3 (granulocyte)##NM_001178147|CSF3|1440|colony stimulating factor 3 (granulocyte)##NM_172219|CSF3|1440|colony stimulating factor 3 (granulocyte)##NM_172220|CSF3|1440|colony stimulating factor 3 (granulocyte)##AK290247|CSF3|1440|colony stimulating factor 3 (granulocyte)##AK298116|CSF3|1440|colony stimulating factor 3 (granulocyte)##M17706|CSF3|1440|colony stimulating factor 3 (granulocyte)##AK313509|CSF3|1440|colony stimulating factor 3 (granulocyte)##X03438|CSF3|1440|colony stimulating factor 3 (granulocyte)##X03655|CSF3|1440|colony stimulating factor 3 (granulocyte)##BC033245|CSF3|1440|colony stimulating factor 3 (granulocyte)##AB102881|CSF3|1440|colony stimulating factor 3 (granulocyte)##CR541891|CSF3|1440|colony stimulating factor 3 (granulocyte)##EU392536|MED24|9862|mediator complex subunit 24##EU392541|MED24|9862|mediator complex subunit 24##D50920|MED24|9862|mediator complex subunit 24##AK022508|MED24|9862|mediator complex subunit 24##AK303502|MED24|9862|mediator complex subunit 24##AK303745|MED24|9862|mediator complex subunit 24##AK291040|MED24|9862|mediator complex subunit 24##AK293309|MED24|9862|mediator complex subunit 24##AK299864|MED24|9862|mediator complex subunit 24##AK300992|MED24|9862|mediator complex subunit 24##NM_001079518|MED24|9862|mediator complex subunit 24##NM_014815|MED24|9862|mediator complex subunit 24	1.01305	CTCF.p2:-5:0.978
chr4	95327967	95328076	reg1004297.p1	12.999	+	TSC_hg19_v1_chr4_-_95263988 BC020734 AK290075 NM_014485	-64015	-	TSC_hg19_v1_chr4_+_95129015 NM_001128429 NM_020159 BC045534 AY008271 BC041800	-198907	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	-199210	+	TSC_hg19_v1_chr4_+_95373030 AY345240 NM_001011513 NM_001011515 NM_001011516 NM_006457	45001	+	TSC_hg19_v1_chr4_+_95373092 BC017902 BC008741 AK291898 AK291624 AK304125 AK296980 AL832157 AL832686 AF061258 AL833151 AL833438	45075	+	BC026029 AM393306 AM393394 AM393485 AM393621 AM393813 DQ890686 DQ893868 AB587372 CU676108 CU679071 AY598328 BT007328 TSC_hg19_v1_chr4_+_95376500	48429	+	BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase##AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase##NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase##NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY345240|PDLIM5|10611|PDZ and LIM domain 5##NM_001011513|PDLIM5|10611|PDZ and LIM domain 5##NM_001011515|PDLIM5|10611|PDZ and LIM domain 5##NM_001011516|PDLIM5|10611|PDZ and LIM domain 5##NM_006457|PDLIM5|10611|PDZ and LIM domain 5##BC017902|PDLIM5|10611|PDZ and LIM domain 5##BC008741|PDLIM5|10611|PDZ and LIM domain 5##AK291898|PDLIM5|10611|PDZ and LIM domain 5##AK291624|PDLIM5|10611|PDZ and LIM domain 5##AK304125|PDLIM5|10611|PDZ and LIM domain 5##AK296980|PDLIM5|10611|PDZ and LIM domain 5##AL832157|PDLIM5|10611|PDZ and LIM domain 5##AL832686|PDLIM5|10611|PDZ and LIM domain 5##AF061258|PDLIM5|10611|PDZ and LIM domain 5##AL833151|PDLIM5|10611|PDZ and LIM domain 5##AL833438|PDLIM5|10611|PDZ and LIM domain 5##BC026029|PDLIM5|10611|PDZ and LIM domain 5##AM393306|PDLIM5|10611|PDZ and LIM domain 5##AM393394|PDLIM5|10611|PDZ and LIM domain 5##AM393485|PDLIM5|10611|PDZ and LIM domain 5##AM393621|PDLIM5|10611|PDZ and LIM domain 5##AM393813|PDLIM5|10611|PDZ and LIM domain 5##DQ890686|PDLIM5|10611|PDZ and LIM domain 5##DQ893868|PDLIM5|10611|PDZ and LIM domain 5##AY598328|PDLIM5|10611|PDZ and LIM domain 5##BT007328|PDLIM5|10611|PDZ and LIM domain 5	0.997821	CTCF.p2:-3:0.998
chr2	106720961	106721088	reg1006509.p1	12.998	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	-38860	+	NM_001004720 BC000103	-252763	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	-288049	+	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	89721	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	89734	-	TSC_hg19_v1_chr2_-_106810781 NM_025076	89781	-	BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1	0.966931	CTCF.p2:-11:0.967
chr7	24859945	24860090	reg1006569.p1	12.997	+	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-62420	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-62678	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	-62950	-	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	159727	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	304860	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	304923	-	NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic	0.987097	CTCF.p2:-7:0.987
chr8	118057050	118057172	reg1004715.p1	12.997	+	AK298294 NM_001172813 NM_001172815 AL713790	-93908	+	EF560713 NM_001172811	-94600	+	BC140924 BC142621 NM_001025357 AB463771 AB181519	-106652	+	NM_001172814 NM_173851	90225	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	475847	+	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	475931	+	AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##EF560713|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172811|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##BC140924|C8orf85|441376|chromosome 8 open reading frame 85##BC142621|C8orf85|441376|chromosome 8 open reading frame 85##NM_001025357|C8orf85|441376|chromosome 8 open reading frame 85##AB181519|C8orf85|441376|chromosome 8 open reading frame 85##NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_080651|MED30|90390|mediator complex subunit 30##BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30	0.999364	CTCF.p2:15:0.999
chr19	55672017	55672151	reg1005824.p1	12.996	+	BT019517 CR541985 CR542012 M64247 BC096165 BC096166 BC096167 BC099631 X54163 AK223451 EU747720 NM_000363	-3057	-	S69208 S69209 BC022086 BC010963 AK291352 AK308199 BC007074 BC034143 BC107798 M19308 M19309 TSC_hg19_v1_chr19_-_55660575 NM_001126132 NM_001126133 NM_003283	-11503	-	TSC_hg19_v1_chr19_-_55658311 AY762903 AY762904 BT019630 S51938	-13667	-	BC016843 TSC_hg19_v1_chr19_-_55677985 BC063449 AK097388 AK093458 AX748139 NM_178837	5899	-	TSC_hg19_v1_chr19_-_55690722 AK295337	18653	-	AK125182 TSC_hg19_v1_chr19_-_55691510 AK313067 BC033683 BC046157 BC029962 NM_003180	19509	-	BT019517|TNNI3|7137|troponin I type 3 (cardiac)##CR541985|TNNI3|7137|troponin I type 3 (cardiac)##CR542012|TNNI3|7137|troponin I type 3 (cardiac)##M64247|TNNI3|7137|troponin I type 3 (cardiac)##BC096165|TNNI3|7137|troponin I type 3 (cardiac)##BC096166|TNNI3|7137|troponin I type 3 (cardiac)##BC096167|TNNI3|7137|troponin I type 3 (cardiac)##BC099631|TNNI3|7137|troponin I type 3 (cardiac)##X54163|TNNI3|7137|troponin I type 3 (cardiac)##AK223451|TNNI3|7137|troponin I type 3 (cardiac)##EU747720|TNNI3|7137|troponin I type 3 (cardiac)##NM_000363|TNNI3|7137|troponin I type 3 (cardiac)##S69208|TNNT1|7138|troponin T type 1 (skeletal, slow)##S69209|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC022086|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC010963|TNNT1|7138|troponin T type 1 (skeletal, slow)##AK291352|TNNT1|7138|troponin T type 1 (skeletal, slow)##AK308199|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC007074|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC034143|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC107798|TNNT1|7138|troponin T type 1 (skeletal, slow)##M19308|TNNT1|7138|troponin T type 1 (skeletal, slow)##M19309|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_001126132|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_001126133|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_003283|TNNT1|7138|troponin T type 1 (skeletal, slow)##AY762903|TNNT1|7138|troponin T type 1 (skeletal, slow)##AY762904|TNNT1|7138|troponin T type 1 (skeletal, slow)##BT019630|TNNT1|7138|troponin T type 1 (skeletal, slow)##S51938|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC016843|C19orf51|352909|chromosome 19 open reading frame 51##BC063449|C19orf51|352909|chromosome 19 open reading frame 51##AK097388|C19orf51|352909|chromosome 19 open reading frame 51##AK093458|C19orf51|352909|chromosome 19 open reading frame 51##NM_178837|C19orf51|352909|chromosome 19 open reading frame 51##AK295337|SYT5|6861|synaptotagmin V##AK125182|SYT5|6861|synaptotagmin V##AK313067|SYT5|6861|synaptotagmin V##BC033683|SYT5|6861|synaptotagmin V##BC046157|SYT5|6861|synaptotagmin V##BC029962|SYT5|6861|synaptotagmin V##NM_003180|SYT5|6861|synaptotagmin V	0.747168	CTCF.p2:2:0.731
chr12	45168724	45168855	reg1006492.p1	12.994	+	TSC_hg19_v1_chr12_+_44229883 BC042192 BC060798 AK057287 BC030284 AL136855 NM_032256	-938883	+	AK127868 BT019691 CR541736 CR541761 AB209302 AB384914 TSC_hg19_v1_chr12_-_44200120 AK291223 BC022491 BC022344 U02680 BC068548 EU832120 EU832214 AK297206 BC043148 NM_001242397 NM_002822	-968677	-	TSC_hg19_v1_chr12_+_44152777 BC013316 AY340962 AY340963 AY340964 AY340965 AY340966 AY340967 AF155118 AK000528	-1016010	+	D89629 AK315960 AK299277 NM_001145109	100602	-	BC020544 TSC_hg19_v1_chr12_-_45269991	101188	-	TSC_hg19_v1_chr12_-_45270099 AK056082 AK297521 AK309825 D83018	101316	-	BC042192|TMEM117|84216|transmembrane protein 117##BC060798|TMEM117|84216|transmembrane protein 117##AK057287|TMEM117|84216|transmembrane protein 117##BC030284|TMEM117|84216|transmembrane protein 117##AL136855|TMEM117|84216|transmembrane protein 117##NM_032256|TMEM117|84216|transmembrane protein 117##AK127868|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BT019691|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541736|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541761|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AB209302|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK291223|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022491|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022344|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##U02680|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC068548|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832120|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832214|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK297206|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC043148|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_001242397|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_002822|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC013316|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340962|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340963|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340964|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340965|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340966|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340967|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AF155118|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK000528|IRAK4|51135|interleukin-1 receptor-associated kinase 4##D89629|NELL2|4753|NEL-like 2 (chicken)##AK315960|NELL2|4753|NEL-like 2 (chicken)##AK299277|NELL2|4753|NEL-like 2 (chicken)##NM_001145109|NELL2|4753|NEL-like 2 (chicken)##BC020544|NELL2|4753|NEL-like 2 (chicken)##AK056082|NELL2|4753|NEL-like 2 (chicken)##AK297521|NELL2|4753|NEL-like 2 (chicken)##AK309825|NELL2|4753|NEL-like 2 (chicken)##D83018|NELL2|4753|NEL-like 2 (chicken)	0.940123	CTCF.p2:0:0.940
chr22	18225335	18225439	reg1004596.p1	12.994	+	TSC_hg19_v1_chr22_+_18121576 AL831982 BC007658	-103822	+	CR456521 TSC_hg19_v1_chr22_+_18121529 NM_015367 AK056248 AK294286 AK314489 AK291449	-103897	+	TSC_hg19_v1_chr22_+_18111627 AF246665	-113748	+	AF250233 AK094795 BC036364 NM_001244572 NM_197966 TSC_hg19_v1_chr22_-_18256811	31393	-	D89803 TSC_hg19_v1_chr22_-_18257188 AY005151 EU678292	31787	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	31820	-	AL831982|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##BC007658|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##CR456521|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##NM_015367|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##AK056248|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##AK294286|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##AK314489|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##AK291449|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##AF246665|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##AF250233|BID|637|BH3 interacting domain death agonist##AK094795|BID|637|BH3 interacting domain death agonist##BC036364|BID|637|BH3 interacting domain death agonist##NM_001244572|BID|637|BH3 interacting domain death agonist##NM_197966|BID|637|BH3 interacting domain death agonist##D89803|BID|637|BH3 interacting domain death agonist##AY005151|BID|637|BH3 interacting domain death agonist##EU678292|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist	0.999741	CTCF.p2:-20:1.000
chr9	131894097	131894199	reg1004827.p2	12.993	+	TSC_hg19_v1_chr9_+_131873871 AK297202 AB464103 BT020119 CU678032 DQ892154 DQ894879 DQ895349 AK307424 NM_001193397	-20289	+	TSC_hg19_v1_chr9_+_131873696 AK302897 CR749810 X73478 AK222788	-20490	+	NM_178000 NM_178001 NM_178003 TSC_hg19_v1_chr9_+_131873614 AK302043	-20544	+	TSC_hg19_v1_chr9_+_131901694 AK293296	7571	+	AK310328 TSC_hg19_v1_chr9_+_131902359	8162	+	TSC_hg19_v1_chr9_-_131940534 BC064028	46359	-	AK297202|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##BT020119|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ892154|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ894879|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ895349|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK307424|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##NM_001193397|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK302897|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##CR749810|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##X73478|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK222788|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##NM_178000|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##NM_178001|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##NM_178003|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK302043|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK310328|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##BC064028|IER5L|389792|immediate early response 5-like	0.996773	CTCF.p2:-10:0.986
chr9	86235812	86235955	reg1007325.p1	12.993	+	AK094281 EF560742 TSC_hg19_v1_chr9_-_86153270 AK297722 AK223597 NM_001244959 NM_174938 BC041376	-82678	-	NM_001244960 AY137774	-153224	-	BC037253 NM_001244961	-289008	-	BC142991 BC036421 BC045782 TSC_hg19_v1_chr9_+_86238057 NM_001001551 NM_001190727 AY615889	2097	+	AF176069 AF293384 AB528730 TSC_hg19_v1_chr9_-_86322601	86717	-	TSC_hg19_v1_chr9_-_86322844 BC010066	86964	-	AK094281|FRMD3|257019|FERM domain containing 3##EF560742|FRMD3|257019|FERM domain containing 3##AK297722|FRMD3|257019|FERM domain containing 3##AK223597|FRMD3|257019|FERM domain containing 3##NM_001244959|FRMD3|257019|FERM domain containing 3##NM_174938|FRMD3|257019|FERM domain containing 3##BC041376|FRMD3|257019|FERM domain containing 3##NM_001244960|FRMD3|257019|FERM domain containing 3##AY137774|FRMD3|257019|FERM domain containing 3##BC037253|FRMD3|257019|FERM domain containing 3##NM_001244961|FRMD3|257019|FERM domain containing 3##BC142991|C9orf103|414328|chromosome 9 open reading frame 103##BC036421|C9orf103|414328|chromosome 9 open reading frame 103##BC045782|C9orf103|414328|chromosome 9 open reading frame 103##NM_001001551|C9orf103|414328|chromosome 9 open reading frame 103##NM_001190727|C9orf103|414328|chromosome 9 open reading frame 103##AY615889|C9orf103|414328|chromosome 9 open reading frame 103##AF176069|UBQLN1|29979|ubiquilin 1##AF293384|UBQLN1|29979|ubiquilin 1##BC010066|UBQLN1|29979|ubiquilin 1	0.999028	CTCF.p2:-12:0.999
chr12	6888178	6888310	reg1005198.p1	12.992	+	NM_002286 BC037962 BC052589 AK292104 X51985	-6516	+	TSC_hg19_v1_chr12_+_6875713 BC128229 BC017025 AB463999	-12467	+	TSC_hg19_v1_chr12_+_6875614 M24398	-12649	+	TSC_hg19_v1_chr12_+_6898631 NM_000616 NM_001195014 NM_001195015 NM_001195016 NM_001195017	10379	+	TSC_hg19_v1_chr12_+_6898691 AK316461	10440	+	TSC_hg19_v1_chr12_+_6898701 AK310652 AK310750 AK311495 AK315898 AK312828 AK316462 AK310687	10457	+	NM_002286|LAG3|3902|lymphocyte-activation gene 3##BC037962|LAG3|3902|lymphocyte-activation gene 3##BC052589|LAG3|3902|lymphocyte-activation gene 3##AK292104|LAG3|3902|lymphocyte-activation gene 3##X51985|LAG3|3902|lymphocyte-activation gene 3##BC128229|PTMS|5763|parathymosin##BC017025|PTMS|5763|parathymosin##M24398|PTMS|5763|parathymosin##NM_000616|CD4|920|CD4 molecule##NM_001195014|CD4|920|CD4 molecule##NM_001195015|CD4|920|CD4 molecule##NM_001195016|CD4|920|CD4 molecule##NM_001195017|CD4|920|CD4 molecule##AK316461|CD4|920|CD4 molecule##AK310652|CD4|920|CD4 molecule##AK310750|CD4|920|CD4 molecule##AK311495|CD4|920|CD4 molecule##AK315898|CD4|920|CD4 molecule##AK312828|CD4|920|CD4 molecule##AK316462|CD4|920|CD4 molecule##AK310687|CD4|920|CD4 molecule	0.987543	CTCF.p2:21:0.988
chr1	70598749	70598864	reg1005079.p1	12.992	+	AF434715 NM_020794 BC128989 CR749629	-372924	+	TSC_hg19_v1_chr1_+_70034033 AF498274	-564726	+	AK294206 TSC_hg19_v1_chr1_+_70033988	-564835	+	BC003407 CU678999 TSC_hg19_v1_chr1_-_70671236 BC008586	72404	-	TSC_hg19_v1_chr1_-_70671263 AK022951 NM_017768	72505	-	TSC_hg19_v1_chr1_+_70671371 BC022815 NM_001190987 NM_004768	72545	+	AF434715|LRRC7|57554|leucine rich repeat containing 7##NM_020794|LRRC7|57554|leucine rich repeat containing 7##BC128989|LRRC7|57554|leucine rich repeat containing 7##CR749629|LRRC7|57554|leucine rich repeat containing 7##AF498274|LRRC7|57554|leucine rich repeat containing 7##BC003407|LRRC40|55631|leucine rich repeat containing 40##BC008586|LRRC40|55631|leucine rich repeat containing 40##AK022951|LRRC40|55631|leucine rich repeat containing 40##NM_017768|LRRC40|55631|leucine rich repeat containing 40##BC022815|SRSF11|9295|serine/arginine-rich splicing factor 11##NM_001190987|SRSF11|9295|serine/arginine-rich splicing factor 11##NM_004768|SRSF11|9295|serine/arginine-rich splicing factor 11	0.813547	CTCF.p2:6:0.814
chr17	73408769	73408904	reg1004181.p2	12.992	+	NM_002086 NM_203506 TSC_hg19_v1_chr17_-_73401791	-7033	-	TSC_hg19_v1_chr17_-_73401781 AK315565	-7057	-	TSC_hg19_v1_chr17_-_73401738 BC000631	-7102	-	NM_014738 TSC_hg19_v1_chr17_+_73452737 AK308160 BC042942 AK304819 D83779 BC045540	43902	+	AK316060 TSC_hg19_v1_chr17_+_73472617 AK294526 CR936809	63766	+	AK300354 NM_001142643 AK315936	97105	-	NM_002086|GRB2|2885|growth factor receptor-bound protein 2##NM_203506|GRB2|2885|growth factor receptor-bound protein 2##AK315565|GRB2|2885|growth factor receptor-bound protein 2##BC000631|GRB2|2885|growth factor receptor-bound protein 2##NM_014738|KIAA0195|9772|KIAA0195##AK308160|KIAA0195|9772|KIAA0195##BC042942|KIAA0195|9772|KIAA0195##AK304819|KIAA0195|9772|KIAA0195##D83779|KIAA0195|9772|KIAA0195##BC045540|KIAA0195|9772|KIAA0195##AK316060|KIAA0195|9772|KIAA0195##AK294526|KIAA0195|9772|KIAA0195##CR936809|KIAA0195|9772|KIAA0195##AK300354|CASKIN2|57513|CASK interacting protein 2##NM_001142643|CASKIN2|57513|CASK interacting protein 2##AK315936|CASKIN2|57513|CASK interacting protein 2	0.995931	CTCF.p2:25:0.996
chr20	9590647	9590794	reg1006660.p1	12.992	+	TSC_hg19_v1_chr20_+_9495437 CU690786	-95258	+	AL121740 BC050727 TSC_hg19_v1_chr20_+_9495326	-95408	+	TSC_hg19_v1_chr20_+_9494997 AK295336 AK316114 NM_001199897 NM_012261	-95721	+	TSC_hg19_v1_chr20_-_9819519 AB040812 BC024179 AK291401 AK307926 AK095674 AK315820 NM_020341 NM_177990 AB033090 AX776013	228847	-	NM_022096 NM_198798 AK097689 TSC_hg19_v1_chr20_+_10015744 BC022878 BC028189 BC011591	425012	+	TSC_hg19_v1_chr20_+_10199575 NM_003081 NM_130811 AK094560 AK098347 D21267 AK223617 AK314359 AK289647 BC010647 BX647443 AK098767 L19760 L19761	608807	+	AL121740|LAMP5|24141|lysosomal-associated membrane protein family, member 5##BC050727|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AK295336|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AK316114|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_001199897|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_012261|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AB040812|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##BC024179|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK291401|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK307926|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK095674|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK315820|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_020341|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_177990|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AB033090|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AX776013|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_022096|ANKRD5|63926|ankyrin repeat domain 5##NM_198798|ANKRD5|63926|ankyrin repeat domain 5##AK097689|ANKRD5|63926|ankyrin repeat domain 5##BC022878|ANKRD5|63926|ankyrin repeat domain 5##BC028189|ANKRD5|63926|ankyrin repeat domain 5##BC011591|ANKRD5|63926|ankyrin repeat domain 5##NM_003081|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_130811|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK094560|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098347|SNAP25|6616|synaptosomal-associated protein, 25kDa##D21267|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK223617|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK314359|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK289647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BC010647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BX647443|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098767|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19760|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19761|SNAP25|6616|synaptosomal-associated protein, 25kDa	0.894801	CTCF.p2:3:0.895
chr2	114737279	114737452	reg1002036.p1	12.992	+	AB209353 TSC_hg19_v1_chr2_+_114674521	-62852	+	TSC_hg19_v1_chr2_+_114647862 AB527566 CU692216	-89515	+	TSC_hg19_v1_chr2_+_114647707 AK312659	-89657	+	BC030832 NM_020868	462533	+	AK055256 BC038514 NM_001178036	481801	+	NM_001178037 DQ857321	1084925	+	AB209353|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AK312659|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##BC030832|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_020868|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178037|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857321|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	2.989694	CTCF.p2:-17:1.000	CTCF.p2:56:0.990	CTCF.p2:-91:1.000
chr11	112090595	112090725	reg1006169.p1	12.991	+	NM_001037290 AK027801 AK297853 AB096252	-43555	+	NM_031938 AK315300 BC041656 BC047934 AK091783 AX747181 AJ290393 CU692016 AF276432	-44318	+	BC029506 NM_031275 AF285600	-52552	+	TSC_hg19_v1_chr11_+_112097100 NM_000317 BC018029 D17400 AK310768 BC009686 AK307133 M97655 AM392676 AM393300 AM393668 DQ890961 DQ894133	6467	+	AY364435 NM_001145024	40922	-	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 TSC_hg19_v1_chr11_+_112831996 AK314589	741327	+	NM_001037290|BCO2|83875|beta-carotene oxygenase 2##AK027801|BCO2|83875|beta-carotene oxygenase 2##AK297853|BCO2|83875|beta-carotene oxygenase 2##AB096252|BCO2|83875|beta-carotene oxygenase 2##NM_031938|BCO2|83875|beta-carotene oxygenase 2##AK315300|BCO2|83875|beta-carotene oxygenase 2##BC041656|BCO2|83875|beta-carotene oxygenase 2##BC047934|BCO2|83875|beta-carotene oxygenase 2##AK091783|BCO2|83875|beta-carotene oxygenase 2##AJ290393|BCO2|83875|beta-carotene oxygenase 2##AF276432|BCO2|83875|beta-carotene oxygenase 2##BC029506|TEX12|56158|testis expressed 12##NM_031275|TEX12|56158|testis expressed 12##AF285600|TEX12|56158|testis expressed 12##NM_000317|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC018029|PTS|5805|6-pyruvoyltetrahydropterin synthase##D17400|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK310768|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC009686|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK307133|PTS|5805|6-pyruvoyltetrahydropterin synthase##M97655|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM392676|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393300|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393668|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ890961|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ894133|PTS|5805|6-pyruvoyltetrahydropterin synthase##AY364435|C11orf34|349633|chromosome 11 open reading frame 34##NM_001145024|C11orf34|349633|chromosome 11 open reading frame 34##NM_000615|NCAM1|4684|neural cell adhesion molecule 1##NM_001076682|NCAM1|4684|neural cell adhesion molecule 1##NM_001242607|NCAM1|4684|neural cell adhesion molecule 1##NM_001242608|NCAM1|4684|neural cell adhesion molecule 1##NM_181351|NCAM1|4684|neural cell adhesion molecule 1##AK314589|NCAM1|4684|neural cell adhesion molecule 1	0.999129	CTCF.p2:-18:0.999
chr16	21200132	21200246	reg1004815.p2	12.991	+	AF494040 NM_017539	-29428	-	NM_020422 TSC_hg19_v1_chr16_+_21169994 AK074667 AK293557 BC015812	-30207	+	TSC_hg19_v1_chr16_+_20912407 BC017039	-287781	+	BC096304 BC096305 BC096306 BC096307 M90366 NM_003460 AK313003 AK293805 AK308820	22691	-	AK096138 NM_145865 TSC_hg19_v1_chr16_+_21245019 BC111784 BC112368	44831	+	CU676152 DQ892377 DQ895591 AK310424 U85772 L02950 TSC_hg19_v1_chr16_-_21289612 BC008398	89404	-	AF494040|DNAH3|55567|dynein, axonemal, heavy chain 3##NM_017539|DNAH3|55567|dynein, axonemal, heavy chain 3##NM_020422|TMEM159|57146|transmembrane protein 159##AK074667|TMEM159|57146|transmembrane protein 159##AK293557|TMEM159|57146|transmembrane protein 159##BC015812|TMEM159|57146|transmembrane protein 159##BC017039|LYRM1|57149|LYR motif containing 1##BC096304|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096305|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096306|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096307|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##M90366|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##NM_003460|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK313003|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK293805|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK308820|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK096138|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##NM_145865|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##BC111784|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##BC112368|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##DQ892377|CRYM|1428|crystallin, mu##DQ895591|CRYM|1428|crystallin, mu##AK310424|CRYM|1428|crystallin, mu##U85772|CRYM|1428|crystallin, mu##L02950|CRYM|1428|crystallin, mu##BC008398|CRYM|1428|crystallin, mu	0.734617	CTCF.p2:-15:0.735
chr17	1624212	1624350	reg1006214.p1	12.990	+	AK298567 NM_001163673 NM_152348 AK091136 AX746799 BC114519 BC114568	-4426	+	BC119720 BC119721 TSC_hg19_v1_chr17_-_1619503 BX648321 BX640650	-4793	-	NM_001164407	-10620	-	AK127946 NM_001163811 TSC_hg19_v1_chr17_+_1628006	3639	+	TSC_hg19_v1_chr17_+_1628049 NM_001163809	3797	+	TSC_hg19_v1_chr17_+_1631333 AL834379 BC092513	7084	+	AK298567|WDR81|124997|WD repeat domain 81##NM_001163673|WDR81|124997|WD repeat domain 81##NM_152348|WDR81|124997|WD repeat domain 81##AK091136|WDR81|124997|WD repeat domain 81##BC114519|WDR81|124997|WD repeat domain 81##BC114568|WDR81|124997|WD repeat domain 81##BC119720|MIR22HG|84981|MIR22 host gene (non-protein coding)##BC119721|MIR22HG|84981|MIR22 host gene (non-protein coding)##BX648321|MIR22HG|84981|MIR22 host gene (non-protein coding)##BX640650|MIR22HG|84981|MIR22 host gene (non-protein coding)##NM_001164407|TLCD2|727910|TLC domain containing 2##AK127946|WDR81|124997|WD repeat domain 81##NM_001163811|WDR81|124997|WD repeat domain 81##NM_001163809|WDR81|124997|WD repeat domain 81##AL834379|WDR81|124997|WD repeat domain 81##BC092513|WDR81|124997|WD repeat domain 81	0.860624	CTCF.p2:-9:0.861
chr19	4576143	4576263	reg1005046.p2	12.989	+	BC142617 TSC_hg19_v1_chr19_-_4559731 AK300037 NM_032108	-16462	-	AK127689 BC070198 TSC_hg19_v1_chr19_-_4540114	-36103	-	AF403428 NM_052972 BC034389 AB073607 AK027382 AK303861 AK314506 TSC_hg19_v1_chr19_-_4540049	-36159	-	NM_152362 TSC_hg19_v1_chr19_+_4639539 BC017672 AK097251	63335	+	NM_001167942	63825	+	BC003639 AL365373 AL365374 AF282264 AB590867 BC014655 AK098829 TSC_hg19_v1_chr19_-_4670355	94140	-	BC142617|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##AK300037|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##NM_032108|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##BC070198|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AF403428|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_052972|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##BC034389|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AB073607|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK027382|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK303861|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK314506|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_152362|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC017672|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##AK097251|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##NM_001167942|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC003639|C19orf10|56005|chromosome 19 open reading frame 10##AL365373|C19orf10|56005|chromosome 19 open reading frame 10##AL365374|C19orf10|56005|chromosome 19 open reading frame 10##AF282264|C19orf10|56005|chromosome 19 open reading frame 10##BC014655|C19orf10|56005|chromosome 19 open reading frame 10##AK098829|C19orf10|56005|chromosome 19 open reading frame 10	0.999914	CTCF.p2:-8:1.000
chr10	79471289	79471413	reg1004883.p1	12.987	+	BC009695 AK098326 TSC_hg19_v1_chr10_-_79397567 BC062659 BC024965 NM_001014797 NM_001161352 NM_001161353 NM_002247	-73788	-	U13913 BC137115 BC137137 BC144496 CR627384 TSC_hg19_v1_chr10_-_79397499	-73865	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	-73945	-	TSC_hg19_v1_chr10_-_79628871 BC117695	157558	-	AB384502 NM_004747 AB011155 BC146794 TSC_hg19_v1_chr10_-_79686514	215051	-	AF021351 AY091459 AB384941 TSC_hg19_v1_chr10_-_79789272 BC041089 AK300329	317870	-	BC009695|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC062659|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC024965|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001014797|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161352|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161353|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_002247|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)##NM_004747|DLG5|9231|discs, large homolog 5 (Drosophila)##AB011155|DLG5|9231|discs, large homolog 5 (Drosophila)##BC146794|DLG5|9231|discs, large homolog 5 (Drosophila)##AF021351|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AY091459|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC041089|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AK300329|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa	0.103799	
chr1	154307662	154307776	reg1005007.p1	12.987	+	TSC_hg19_v1_chr1_+_154301249 AK054886	-6463	+	AY302537 NM_020452	-7444	+	TSC_hg19_v1_chr1_+_154298034 NM_001005855 X58235	-9656	+	NM_000565 NM_001206866 NM_181359 X12830 BC089410 TSC_hg19_v1_chr1_+_154377822	70031	+	AK223582 BC132684 BC132686 TSC_hg19_v1_chr1_+_154377856	70133	+	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	70355	+	AK054886|ATP8B2|57198|ATPase, class I, type 8B, member 2##AY302537|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_020452|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_001005855|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_000565|IL6R|3570|interleukin 6 receptor##NM_001206866|IL6R|3570|interleukin 6 receptor##NM_181359|IL6R|3570|interleukin 6 receptor##X12830|IL6R|3570|interleukin 6 receptor##BC089410|IL6R|3570|interleukin 6 receptor##AK223582|IL6R|3570|interleukin 6 receptor##BC132684|IL6R|3570|interleukin 6 receptor##BC132686|IL6R|3570|interleukin 6 receptor##AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor	0.994681	CTCF.p2:7:0.995
chr14	81630589	81630727	reg1006362.p1	12.987	+	AK303378 BC024205 NM_000369 NM_001018036 NM_001142626 M31774 BC108653 BC009237 M73747 M32215 BC063613 AB209207 BC120972 BC120973 BC127628 BC127629 BC141970 S49816 AB384880 AY429111 CU687778 S45272	-208792	+	BC045834 AK309833 TSC_hg19_v1_chr14_-_81408073	-222600	-	NM_152446	-224775	-	D14887 TSC_hg19_v1_chr14_-_81687285 NM_015859 BC050703	56622	-	D14886 NM_201595	56916	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	234168	-	BC024205|TSHR|7253|thyroid stimulating hormone receptor##NM_000369|TSHR|7253|thyroid stimulating hormone receptor##NM_001018036|TSHR|7253|thyroid stimulating hormone receptor##NM_001142626|TSHR|7253|thyroid stimulating hormone receptor##M31774|TSHR|7253|thyroid stimulating hormone receptor##BC108653|TSHR|7253|thyroid stimulating hormone receptor##BC009237|TSHR|7253|thyroid stimulating hormone receptor##M73747|TSHR|7253|thyroid stimulating hormone receptor##M32215|TSHR|7253|thyroid stimulating hormone receptor##BC063613|TSHR|7253|thyroid stimulating hormone receptor##AB209207|TSHR|7253|thyroid stimulating hormone receptor##BC120972|TSHR|7253|thyroid stimulating hormone receptor##BC120973|TSHR|7253|thyroid stimulating hormone receptor##BC127628|TSHR|7253|thyroid stimulating hormone receptor##BC127629|TSHR|7253|thyroid stimulating hormone receptor##BC141970|TSHR|7253|thyroid stimulating hormone receptor##S49816|TSHR|7253|thyroid stimulating hormone receptor##AY429111|TSHR|7253|thyroid stimulating hormone receptor##S45272|TSHR|7253|thyroid stimulating hormone receptor##BC045834|CEP128|145508|centrosomal protein 128kDa##AK309833|CEP128|145508|centrosomal protein 128kDa##NM_152446|CEP128|145508|centrosomal protein 128kDa##D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##D14886|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_201595|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2	0.665887	CTCF.p2:-8:0.666
chr8	95586467	95586603	reg1005370.p1	12.986	+	AB037850 AF116724 HQ258534 TSC_hg19_v1_chr8_-_95565696 AL832487 BC112288 BC113380 NM_015496 NM_183009	-20828	-	BC001965 AF112481 BC020668 AK290437 TSC_hg19_v1_chr8_-_95487344 NM_001205262 NM_012415	-99216	-	AF007866 NM_001205263	-137380	-	AK057998 TSC_hg19_v1_chr8_-_95651772	65199	-	TSC_hg19_v1_chr8_+_95653284 BX647570	66757	+	TSC_hg19_v1_chr8_+_95653392 NM_001034915 NM_001122825 NM_001122826 NM_001122827 NM_017697	66831	+	AB037850|KIAA1429|25962|KIAA1429##AF116724|KIAA1429|25962|KIAA1429##AL832487|KIAA1429|25962|KIAA1429##BC112288|KIAA1429|25962|KIAA1429##BC113380|KIAA1429|25962|KIAA1429##NM_015496|KIAA1429|25962|KIAA1429##NM_183009|KIAA1429|25962|KIAA1429##BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205262|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK057998|LOC100288748|100288748|uncharacterized LOC100288748##BX647570|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001034915|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122825|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122826|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122827|ESRP1|54845|epithelial splicing regulatory protein 1##NM_017697|ESRP1|54845|epithelial splicing regulatory protein 1	0.997445	CTCF.p2:17:0.997
chrX	13524845	13524971	reg1006471.p1	12.986	+	TSC_hg19_v1_chrX_-_13397507 D28370	-127403	-	AK302365 NM_001135995	-186391	-	AB050195 TSC_hg19_v1_chrX_-_13338140 BC137186 BC137187	-186770	-	NM_001167890 NM_015507 AK075214 AK300236 AJ245671 AF193055 AF186084 AK300137 AK315018 AY358333 BC038587 AL117610 CU691592 DQ890938	62928	+	AK291271 AK315599 NM_152634 AK294465	146358	+	TSC_hg19_v1_chrX_+_13707246 NM_001195328 NM_004251	182333	+	AK302365|ATXN3L|92552|ataxin 3-like##NM_001135995|ATXN3L|92552|ataxin 3-like##AB050195|ATXN3L|92552|ataxin 3-like##BC137186|ATXN3L|92552|ataxin 3-like##BC137187|ATXN3L|92552|ataxin 3-like##NM_001167890|EGFL6|25975|EGF-like-domain, multiple 6##NM_015507|EGFL6|25975|EGF-like-domain, multiple 6##AK075214|EGFL6|25975|EGF-like-domain, multiple 6##AK300236|EGFL6|25975|EGF-like-domain, multiple 6##AJ245671|EGFL6|25975|EGF-like-domain, multiple 6##AF193055|EGFL6|25975|EGF-like-domain, multiple 6##AF186084|EGFL6|25975|EGF-like-domain, multiple 6##AK300137|EGFL6|25975|EGF-like-domain, multiple 6##AK315018|EGFL6|25975|EGF-like-domain, multiple 6##AY358333|EGFL6|25975|EGF-like-domain, multiple 6##BC038587|EGFL6|25975|EGF-like-domain, multiple 6##AL117610|EGFL6|25975|EGF-like-domain, multiple 6##DQ890938|EGFL6|25975|EGF-like-domain, multiple 6##AK291271|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK315599|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##NM_152634|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK294465|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##NM_001195328|RAB9A|9367|RAB9A, member RAS oncogene family##NM_004251|RAB9A|9367|RAB9A, member RAS oncogene family	0.986635	CTCF.p2:-13:0.987
chr9	128991275	128991387	reg1003561.p2	12.984	+	AK309713 NM_001134778	-480854	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-481631	+	TSC_hg19_v1_chr9_-_128469506 AY524429 AY524430 AY524431 AY524432 NM_001006617 NM_001006618 NM_001006619 NM_001006620 NM_001006621 NM_024117	-521812	-	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	97836	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	385430	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	575979	+	AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##AY524429|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524430|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524431|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524432|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006617|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006618|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006619|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006620|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006621|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_024117|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43	0.909224	CTCF.p2:0:0.909
chr10	79479447	79479561	reg1006333.p1	12.982	+	BC009695 AK098326 TSC_hg19_v1_chr10_-_79397567 BC062659 BC024965 NM_001014797 NM_001161352 NM_001161353 NM_002247	-81941	-	U13913 BC137115 BC137137 BC144496 CR627384 TSC_hg19_v1_chr10_-_79397499	-82018	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	-82098	-	TSC_hg19_v1_chr10_-_79628871 BC117695	149405	-	AB384502 NM_004747 AB011155 BC146794 TSC_hg19_v1_chr10_-_79686514	206898	-	AF021351 AY091459 AB384941 TSC_hg19_v1_chr10_-_79789272 BC041089 AK300329	309717	-	BC009695|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC062659|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC024965|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001014797|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161352|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161353|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_002247|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)##NM_004747|DLG5|9231|discs, large homolog 5 (Drosophila)##AB011155|DLG5|9231|discs, large homolog 5 (Drosophila)##BC146794|DLG5|9231|discs, large homolog 5 (Drosophila)##AF021351|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AY091459|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC041089|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AK300329|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa	0.034053	
chr19	40727898	40728045	reg1004952.p2	12.982	+	TSC_hg19_v1_chr19_-_40724275 AK054935 AK289550 BC029539 NM_152479	-3683	-	TSC_hg19_v1_chr19_+_40697520 NM_002446 X90846 Z48615	-30325	+	TSC_hg19_v1_chr19_-_40596843 AK091274 AX746890 NM_001010880 AK131328 BC021982 NM_001142577 NM_001142578 NM_001142579	-131159	-	AK023327 AK301833 NM_024877	4608	-	BC032709 TSC_hg19_v1_chr19_-_40791218 AK308006 M77198	63213	-	TSC_hg19_v1_chr19_-_40791245 AK314619	63264	-	AK054935|TTC9B|148014|tetratricopeptide repeat domain 9B##AK289550|TTC9B|148014|tetratricopeptide repeat domain 9B##BC029539|TTC9B|148014|tetratricopeptide repeat domain 9B##NM_152479|TTC9B|148014|tetratricopeptide repeat domain 9B##NM_002446|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##X90846|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##Z48615|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##AK091274|ZNF780A|284323|zinc finger protein 780A##NM_001010880|ZNF780A|284323|zinc finger protein 780A##AK131328|ZNF780A|284323|zinc finger protein 780A##BC021982|ZNF780A|284323|zinc finger protein 780A##NM_001142577|ZNF780A|284323|zinc finger protein 780A##NM_001142578|ZNF780A|284323|zinc finger protein 780A##NM_001142579|ZNF780A|284323|zinc finger protein 780A##AK023327|CNTD2|79935|cyclin N-terminal domain containing 2##AK301833|CNTD2|79935|cyclin N-terminal domain containing 2##NM_024877|CNTD2|79935|cyclin N-terminal domain containing 2##BC032709|AKT2|208|v-akt murine thymoma viral oncogene homolog 2##AK308006|AKT2|208|v-akt murine thymoma viral oncogene homolog 2##M77198|AKT2|208|v-akt murine thymoma viral oncogene homolog 2##AK314619|AKT2|208|v-akt murine thymoma viral oncogene homolog 2	0.996026	CTCF.p2:-5:0.996
chr2	149846528	149846663	reg1005746.p1	12.982	+	TSC_hg19_v1_chr2_+_149633176 AB384491	-213416	+	BC017298 TSC_hg19_v1_chr2_+_149632844	-213755	+	TSC_hg19_v1_chr2_+_149632795 NM_004522 BC002721 BC025961 AB011103	-213799	+	BC040176 NM_177964	48385	+	AK124733 NM_001195685	339903	+	NM_194317 TSC_hg19_v1_chr2_+_150187114 AY358623 AK309248	340507	+	BC017298|KIF5C|3800|kinesin family member 5C##NM_004522|KIF5C|3800|kinesin family member 5C##BC002721|KIF5C|3800|kinesin family member 5C##BC025961|KIF5C|3800|kinesin family member 5C##AB011103|KIF5C|3800|kinesin family member 5C##BC040176|LYPD6B|130576|LY6/PLAUR domain containing 6B##NM_177964|LYPD6B|130576|LY6/PLAUR domain containing 6B##AK124733|LYPD6|130574|LY6/PLAUR domain containing 6##NM_001195685|LYPD6|130574|LY6/PLAUR domain containing 6##NM_194317|LYPD6|130574|LY6/PLAUR domain containing 6##AY358623|LYPD6|130574|LY6/PLAUR domain containing 6##AK309248|LYPD6|130574|LY6/PLAUR domain containing 6	0.8568	CTCF.p2:12:0.857
chr11	131898662	131898780	reg1003943.p2	12.981	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-117382	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-118097	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-658252	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	914293	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	914884	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	1503593	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.4218	CTCF.p2:5:0.422
chr17	45776300	45776438	reg1006814.p1	12.980	+	TSC_hg19_v1_chr17_+_45773425 AB383985	-2920	+	TSC_hg19_v1_chr17_+_45773067 BC111418	-3330	+	AB018318 BC152407 BC167150 NM_014726	-3740	+	AF093098 NM_013351 AK223634 BC039739 AF241243 AB590854 TSC_hg19_v1_chr17_+_45810959	34415	+	BC065482 TSC_hg19_v1_chr17_-_45899130	122755	-	TSC_hg19_v1_chr17_-_45899154 AF323729 AK000267 BC028010 NM_145798 AK289523 AF392446	122816	-	BC111418|TBKBP1|9755|TBK1 binding protein 1##AB018318|TBKBP1|9755|TBK1 binding protein 1##BC152407|TBKBP1|9755|TBK1 binding protein 1##BC167150|TBKBP1|9755|TBK1 binding protein 1##NM_014726|TBKBP1|9755|TBK1 binding protein 1##AF093098|TBX21|30009|T-box 21##NM_013351|TBX21|30009|T-box 21##AK223634|TBX21|30009|T-box 21##BC039739|TBX21|30009|T-box 21##AF241243|TBX21|30009|T-box 21##BC065482|OSBPL7|114881|oxysterol binding protein-like 7##AF323729|OSBPL7|114881|oxysterol binding protein-like 7##BC028010|OSBPL7|114881|oxysterol binding protein-like 7##NM_145798|OSBPL7|114881|oxysterol binding protein-like 7##AK289523|OSBPL7|114881|oxysterol binding protein-like 7##AF392446|OSBPL7|114881|oxysterol binding protein-like 7	0.999452	CTCF.p2:3:0.999
chr11	61638742	61638854	reg1005130.p1	12.979	+	AK074939 BC009011 TSC_hg19_v1_chr11_+_61595772 AF126799 AB529115	-42982	+	TSC_hg19_v1_chr11_+_61595676 AF084559 NM_004265	-43097	+	AK074754 AK074819 TSC_hg19_v1_chr11_-_61584464 NM_013402	-54309	-	AB529172 DQ892880 DQ896129 CU678796 TSC_hg19_v1_chr11_-_61659018 AF134404 AK295473 AK310523 AF084560 BC004901 NM_021727	20156	-	TSC_hg19_v1_chr11_-_61684983 BC022239 NM_013401	46190	-	BC015220 NM_001139443 NM_004183	78557	+	AK074939|FADS2|9415|fatty acid desaturase 2##BC009011|FADS2|9415|fatty acid desaturase 2##AF126799|FADS2|9415|fatty acid desaturase 2##AF084559|FADS2|9415|fatty acid desaturase 2##NM_004265|FADS2|9415|fatty acid desaturase 2##AK074754|FADS1|3992|fatty acid desaturase 1##AK074819|FADS1|3992|fatty acid desaturase 1##NM_013402|FADS1|3992|fatty acid desaturase 1##DQ892880|FADS3|3995|fatty acid desaturase 3##DQ896129|FADS3|3995|fatty acid desaturase 3##AF134404|FADS3|3995|fatty acid desaturase 3##AK295473|FADS3|3995|fatty acid desaturase 3##AK310523|FADS3|3995|fatty acid desaturase 3##AF084560|FADS3|3995|fatty acid desaturase 3##BC004901|FADS3|3995|fatty acid desaturase 3##NM_021727|FADS3|3995|fatty acid desaturase 3##BC022239|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##NM_013401|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##BC015220|BEST1|7439|bestrophin 1##NM_001139443|BEST1|7439|bestrophin 1##NM_004183|BEST1|7439|bestrophin 1	0.047881	
chr6	107014548	107014654	reg1004146.p1	12.979	+	TSC_hg19_v1_chr6_+_106960443 U83115	-54190	+	AK056705 NM_001624	-54872	+	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	-240938	-	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	62679	-	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	62896	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	334871	+	U83115|AIM1|202|absent in melanoma 1##AK056705|AIM1|202|absent in melanoma 1##NM_001624|AIM1|202|absent in melanoma 1##CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203	0.99943	CTCF.p2:-21:0.999
chr6	161171371	161171483	reg1005756.p1	12.979	+	NM_000301 NM_001168338 AK308036 AK312966 AK298338 X05199 M74220 BC060513	-48166	+	NM_005577	-84021	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	-402033	+	TSC_hg19_v1_chr6_+_161412797 BC146770 D86968	241315	+	TSC_hg19_v1_chr6_+_161412815 AF002715 NM_005922 NM_006724	241387	+	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	241431	+	NM_000301|PLG|5340|plasminogen##NM_001168338|PLG|5340|plasminogen##AK308036|PLG|5340|plasminogen##AK312966|PLG|5340|plasminogen##AK298338|PLG|5340|plasminogen##X05199|PLG|5340|plasminogen##M74220|PLG|5340|plasminogen##BC060513|PLG|5340|plasminogen##NM_005577|LPA|4018|lipoprotein, Lp(a)##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##BC146770|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##D86968|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AF002715|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_005922|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_006724|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4	0.405837	CTCF.p2:-27:0.406
chr6	3991174	3991324	reg1006284.p1	12.979	+	BC001261 NM_012135 Y18503	-141623	+	NM_183373 TSC_hg19_v1_chr6_-_3752248	-239003	-	TSC_hg19_v1_chr6_-_3720312 BC031944	-270939	-	TSC_hg19_v1_chr6_+_4021647 BC034969 NM_003913 AK291244 AB011108 AF283465 AB385345 AY029347	30340	+	BC039349 NM_173563	88174	-	NM_001085401 BC047663 BC066986	88195	+	BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B##NM_183373|PXDC1|221749|PX domain containing 1##BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##BC039349|C6orf146|222826|chromosome 6 open reading frame 146##NM_173563|C6orf146|222826|chromosome 6 open reading frame 146##NM_001085401|C6orf201|404220|chromosome 6 open reading frame 201##BC047663|C6orf201|404220|chromosome 6 open reading frame 201##BC066986|C6orf201|404220|chromosome 6 open reading frame 201	0.416099	CTCF.p2:7:0.416
chr11	123578437	123578552	reg1004564.p1	12.977	+	TSC_hg19_v1_chr11_-_123525303 AK314513 AL136589 NM_001040151 NM_018400	-53187	-	AJ243396 AB032984 TSC_hg19_v1_chr11_-_123525042	-53533	-	AB033027 TSC_hg19_v1_chr11_+_123431038	-147457	+	AK023751 TSC_hg19_v1_chr11_-_123612326 BC013382 NM_003455	33851	-	TSC_hg19_v1_chr11_-_123612369 AK226047	33879	-	NM_001005188 BC136855 BC136856	46744	-	AK314513|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AL136589|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_001040151|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_018400|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AB033027|GRAMD1B|57476|GRAM domain containing 1B##AK023751|ZNF202|7753|zinc finger protein 202##BC013382|ZNF202|7753|zinc finger protein 202##NM_003455|ZNF202|7753|zinc finger protein 202##AK226047|ZNF202|7753|zinc finger protein 202##NM_001005188|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1##BC136855|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1##BC136856|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	0.967393	CTCF.p2:11:0.967
chr12	48137931	48138035	reg1004971.p1	12.977	+	AK314688 BC069715 BC069698 BC074763 AX772808 AK300169 AK075446 BC111782 M32402 M36109 NM_001172439 NM_001172440 NM_006025	-18694	-	TSC_hg19_v1_chr12_-_48099819 NM_001146075 NM_001146076 NM_024604	-38152	-	TSC_hg19_v1_chr12_-_48099814 BC003680	-38169	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	14426	-	AK092448 NM_001098531	14891	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	29051	+	AK314688|ENDOU|8909|endonuclease, polyU-specific##BC069715|ENDOU|8909|endonuclease, polyU-specific##BC069698|ENDOU|8909|endonuclease, polyU-specific##BC074763|ENDOU|8909|endonuclease, polyU-specific##AX772808|ENDOU|8909|endonuclease, polyU-specific##AK300169|ENDOU|8909|endonuclease, polyU-specific##AK075446|ENDOU|8909|endonuclease, polyU-specific##BC111782|ENDOU|8909|endonuclease, polyU-specific##M32402|ENDOU|8909|endonuclease, polyU-specific##M36109|ENDOU|8909|endonuclease, polyU-specific##NM_001172439|ENDOU|8909|endonuclease, polyU-specific##NM_001172440|ENDOU|8909|endonuclease, polyU-specific##NM_006025|ENDOU|8909|endonuclease, polyU-specific##NM_001146075|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146076|RPAP3|79657|RNA polymerase II associated protein 3##NM_024604|RPAP3|79657|RNA polymerase II associated protein 3##BC003680|RPAP3|79657|RNA polymerase II associated protein 3##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1	0.897198	CTCF.p2:-10:0.897
chr1	118217279	118217396	reg1004587.p1	12.976	+	TSC_hg19_v1_chr1_+_118148669 AK000209 BC036516 BC131726	-68658	+	TSC_hg19_v1_chr1_+_118148542 NM_017709	-68751	+	TSC_hg19_v1_chr1_+_117910083 BC052954 AK307842 NM_006699 BC063300	-307244	+	TSC_hg19_v1_chr1_-_118472186 BC013132	254845	-	AK000149 BC013324 TSC_hg19_v1_chr1_-_118472244 NM_001135589 NM_017686	254916	-	BC058836 TSC_hg19_v1_chr1_+_118472357	255016	+	AK000209|FAM46C|54855|family with sequence similarity 46, member C##BC036516|FAM46C|54855|family with sequence similarity 46, member C##BC131726|FAM46C|54855|family with sequence similarity 46, member C##NM_017709|FAM46C|54855|family with sequence similarity 46, member C##BC052954|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##AK307842|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##NM_006699|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC063300|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC013132|GDAP2|54834|ganglioside induced differentiation associated protein 2##AK000149|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC013324|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_001135589|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_017686|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC058836|WDR3|10885|WD repeat domain 3	0.084816	
chr12	562256	562437	reg1000665.p1	12.975	+	NM_001130146 NM_032358 AK293165 TSC_hg19_v1_chr12_+_510809 AK027638	-51565	+	TSC_hg19_v1_chr12_-_498451 AK301150 AK301273 AB209999 BC048307 BC053893 NM_001042603 BC092417	-63744	-	AK316029 NM_001130147 NM_001130148 AK308216	-63810	+	AB089940 NM_173593	7196	+	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	189832	+	TSC_hg19_v1_chr12_-_752800 AK298043	190473	-	NM_001130146|CCDC77|84318|coiled-coil domain containing 77##NM_032358|CCDC77|84318|coiled-coil domain containing 77##AK293165|CCDC77|84318|coiled-coil domain containing 77##AK027638|CCDC77|84318|coiled-coil domain containing 77##AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A##AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A##AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A##BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A##BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A##NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A##BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A##AK316029|CCDC77|84318|coiled-coil domain containing 77##NM_001130147|CCDC77|84318|coiled-coil domain containing 77##NM_001130148|CCDC77|84318|coiled-coil domain containing 77##AK308216|CCDC77|84318|coiled-coil domain containing 77##AB089940|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_173593|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##BC033133|LOC100049716|100049716|uncharacterized LOC100049716	2.685228	CTCF.p2:-27:0.895	CTCF.p2:43:0.895	CTCF.p2:-98:0.895
chr20	5173092	5173213	reg1005803.p1	12.975	+	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-65457	+	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	-65630	+	AK300558 AK311014 NM_002592	-65926	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	121884	-	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	418435	-	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	557914	+	AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK300558|PCNA|5111|proliferating cell nuclear antigen##NM_002592|PCNA|5111|proliferating cell nuclear antigen##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196	0.994061	CTCF.p2:2:0.994
chr22	45022218	45022340	reg1006101.p1	12.975	+	TSC_hg19_v1_chr22_-_44893996 BC030232 NM_032287 AK296479	-128161	-	AB463098 CU013037 CU013325 CR456439 TSC_hg19_v1_chr22_-_44893542	-128790	-	AK126304 TSC_hg19_v1_chr22_-_44893199	-129083	-	TSC_hg19_v1_chr22_+_45064630 AY859540 NM_001017528 NM_001017529	42216	+	NM_001017530 NM_001198721 NM_015366	50408	+	AK091884 TSC_hg19_v1_chr22_+_45072964 AK055848	50691	+	BC030232|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##NM_032287|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##AK296479|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CU013037|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CU013325|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CR456439|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##AK126304|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##AY859540|PRR5|55615|proline rich 5 (renal)##NM_001017528|PRR5|55615|proline rich 5 (renal)##NM_001017529|PRR5|55615|proline rich 5 (renal)##NM_001017530|PRR5|55615|proline rich 5 (renal)##NM_001198721|PRR5|55615|proline rich 5 (renal)##NM_015366|PRR5|55615|proline rich 5 (renal)##AK091884|PRR5|55615|proline rich 5 (renal)##AK055848|PRR5|55615|proline rich 5 (renal)	0.999373	CTCF.p2:12:0.999
chr11	71736286	71736382	reg1004876.p1	12.974	+	AF110799 AF110800 NM_001145055 AB590783 CU692186 AB019504	-25334	+	NM_001145057 AF122906	-25659	+	TSC_hg19_v1_chr11_+_71709954 NM_001039659 NM_001039660 NM_173044 AF215907 BC044215 AF110801 NM_005699 NM_173042	-26305	+	TSC_hg19_v1_chr11_-_71746967 AB463147	10643	-	TSC_hg19_v1_chr11_-_71752156 AK290509 AK309041	15809	-	TSC_hg19_v1_chr11_-_71781122 BC036808	44780	-	AF110799|IL18BP|10068|interleukin 18 binding protein##AF110800|IL18BP|10068|interleukin 18 binding protein##NM_001145055|IL18BP|10068|interleukin 18 binding protein##AB019504|IL18BP|10068|interleukin 18 binding protein##NM_001145057|IL18BP|10068|interleukin 18 binding protein##AF122906|IL18BP|10068|interleukin 18 binding protein##NM_001039659|IL18BP|10068|interleukin 18 binding protein##NM_001039660|IL18BP|10068|interleukin 18 binding protein##NM_173044|IL18BP|10068|interleukin 18 binding protein##AF215907|IL18BP|10068|interleukin 18 binding protein##BC044215|IL18BP|10068|interleukin 18 binding protein##AF110801|IL18BP|10068|interleukin 18 binding protein##NM_005699|IL18BP|10068|interleukin 18 binding protein##NM_173042|IL18BP|10068|interleukin 18 binding protein##AK290509|NUMA1|4926|nuclear mitotic apparatus protein 1##AK309041|NUMA1|4926|nuclear mitotic apparatus protein 1##BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1	0.669645	CTCF.p2:-3:0.670
chr17	37309228	37309349	reg1004543.p1	12.974	+	TSC_hg19_v1_chr17_-_37307891 NM_020405	-1393	-	TSC_hg19_v1_chr17_-_37307863 BC036059	-1441	-	EU832116 EU832210 AK312999 TSC_hg19_v1_chr17_-_37307740 AF279144 AF378753 AY704670 AY704671	-1556	-	TSC_hg19_v1_chr17_+_37321318 AK093715	12033	+	NM_001143968	13125	-	TSC_hg19_v1_chr17_-_37350083 AB209176	40805	-	NM_020405|PLXDC1|57125|plexin domain containing 1##BC036059|PLXDC1|57125|plexin domain containing 1##EU832116|PLXDC1|57125|plexin domain containing 1##EU832210|PLXDC1|57125|plexin domain containing 1##AK312999|PLXDC1|57125|plexin domain containing 1##AF279144|PLXDC1|57125|plexin domain containing 1##AF378753|PLXDC1|57125|plexin domain containing 1##AY704670|PLXDC1|57125|plexin domain containing 1##AY704671|PLXDC1|57125|plexin domain containing 1##AK093715|LOC284108|284108|uncharacterized LOC284108##NM_001143968|ARL5C|390790|ADP-ribosylation factor-like 5C##AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	0.996218	CTCF.p2:11:0.996
chr8	126656871	126657014	reg1005855.p1	12.974	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-214363	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-552845	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-552885	-	TSC_hg19_v1_chr8_-_126963395 BX648371	306471	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	913613	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	913782	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.026866	
chr12	66481285	66481405	reg1003815.p2	12.973	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	-262332	+	TSC_hg19_v1_chr12_+_66218605 AK311399	-262738	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	-263138	+	TSC_hg19_v1_chr12_-_66524536 BC070232 BC006002 BC107780 AK091568 AX747065 NM_032338	43180	-	AB464309 TSC_hg19_v1_chr12_-_66563773 AF182414 AF161526 BC020613 AF113127 AK301359 AF182041 AK075069 AK225158 BC070366 BC052273 BC094852	82409	-	TSC_hg19_v1_chr12_-_66563806 BC004401 NM_016056	82457	-	AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##BC070232|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC006002|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC107780|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AK091568|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##NM_032338|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AF182414|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF161526|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC020613|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF113127|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF182041|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK075069|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK225158|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC070366|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC052273|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC094852|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC004401|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##NM_016056|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4	0.999541	CTCF.p2:0:1.000
chr19	46027044	46027167	reg1002457.p1	12.972	+	TSC_hg19_v1_chr19_+_46010748 BC026019 BC038224 Z46389	-16332	+	TSC_hg19_v1_chr19_+_46010736 AK314812	-16382	+	TSC_hg19_v1_chr19_+_46010688 NM_003370	-16417	+	AB528200 AM392686 EU832556 TSC_hg19_v1_chr19_-_46088061 BC064146 BC005059 BC047316	60937	-	TSC_hg19_v1_chr19_-_46088075 AK025840	60973	-	TSC_hg19_v1_chr19_-_46088084 AK098798 NM_001017989 NM_025136	60999	-	BC026019|VASP|7408|vasodilator-stimulated phosphoprotein##BC038224|VASP|7408|vasodilator-stimulated phosphoprotein##Z46389|VASP|7408|vasodilator-stimulated phosphoprotein##AK314812|VASP|7408|vasodilator-stimulated phosphoprotein##NM_003370|VASP|7408|vasodilator-stimulated phosphoprotein##AM392686|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##EU832556|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC064146|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC005059|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC047316|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##AK025840|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##AK098798|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##NM_001017989|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##NM_025136|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)	0.639671	CTCF.p2:-4:0.640
chr6	159595425	159595546	reg1005947.p1	12.972	+	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	-5055	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-129384	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-174264	-	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	518765	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	518877	-	TSC_hg19_v1_chr6_+_160148149 AK290854 AF374416 NM_004906 NM_152858 BC000383 BC004432 BC069192	552687	+	DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial##AK290854|WTAP|9589|Wilms tumor 1 associated protein##AF374416|WTAP|9589|Wilms tumor 1 associated protein##NM_004906|WTAP|9589|Wilms tumor 1 associated protein##NM_152858|WTAP|9589|Wilms tumor 1 associated protein##BC000383|WTAP|9589|Wilms tumor 1 associated protein##BC004432|WTAP|9589|Wilms tumor 1 associated protein##BC069192|WTAP|9589|Wilms tumor 1 associated protein	0.032545	
chr15	57819808	57819943	reg1006530.p1	12.971	+	AK056673 AK307410 NM_001252335 NM_032866 TSC_hg19_v1_chr15_+_57668732 AY274808 BC030995 AY610514	-151158	+	TSC_hg19_v1_chr15_+_57511630 AK294991 AK304007 AK311359 AK308101 NM_207040 BX537967 AM393573	-308208	+	TSC_hg19_v1_chr15_+_57210977 M83233	-608875	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	64290	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	179011	+	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	179105	+	AK056673|CGNL1|84952|cingulin-like 1##AK307410|CGNL1|84952|cingulin-like 1##NM_001252335|CGNL1|84952|cingulin-like 1##NM_032866|CGNL1|84952|cingulin-like 1##AY274808|CGNL1|84952|cingulin-like 1##BC030995|CGNL1|84952|cingulin-like 1##AY610514|CGNL1|84952|cingulin-like 1##AK294991|TCF12|6938|transcription factor 12##AK304007|TCF12|6938|transcription factor 12##AK311359|TCF12|6938|transcription factor 12##AK308101|TCF12|6938|transcription factor 12##NM_207040|TCF12|6938|transcription factor 12##BX537967|TCF12|6938|transcription factor 12##AM393573|TCF12|6938|transcription factor 12##M83233|TCF12|6938|transcription factor 12##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M	0.99335	CTCF.p2:13:0.993
chr17	55749381	55749503	reg1006000.p1	12.971	+	AK093888 AX748353 NM_170721	-415069	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-415469	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-586299	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	177962	-	AK000746 NM_017949	231307	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	283234	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.990162	CTCF.p2:1:0.990
chr2	218650317	218650431	reg1005561.p1	12.970	+	BC029516 NM_003284	-925593	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-1090114	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-1090808	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	158407	-	AK001785 TSC_hg19_v1_chr2_-_218843551	193172	-	TSC_hg19_v1_chr2_-_218867719 AK309785	217349	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.99463	CTCF.p2:-3:0.995
chr20	17976844	17976966	reg1005150.p2	12.968	+	TSC_hg19_v1_chr20_+_17949742 AF306686 AK315532 AF306684 AF306685 AK027503 BC016869 NM_052865	-27243	+	TSC_hg19_v1_chr20_-_17949438 BC002724 BC062638 BC064555 BC073171 AK123903 AK308017 AK296947 BC000100 AF121855 NM_152227	-27465	-	BT007191 AB464237 TSC_hg19_v1_chr20_-_17949155 AK223308 AK001793 AK129505 NM_014426 BC093623 BC093980 BC143274	-27691	-	AK022284 NM_021220 BC006148	61617	-	TSC_hg19_v1_chr20_+_18118516 NM_001164811 AY358666	141627	+	NM_020536 BC007537	146010	+	AF306686|C20orf72|92667|chromosome 20 open reading frame 72##AK315532|C20orf72|92667|chromosome 20 open reading frame 72##AF306684|C20orf72|92667|chromosome 20 open reading frame 72##AF306685|C20orf72|92667|chromosome 20 open reading frame 72##AK027503|C20orf72|92667|chromosome 20 open reading frame 72##BC016869|C20orf72|92667|chromosome 20 open reading frame 72##NM_052865|C20orf72|92667|chromosome 20 open reading frame 72##BC002724|SNX5|27131|sorting nexin 5##BC062638|SNX5|27131|sorting nexin 5##AK123903|SNX5|27131|sorting nexin 5##AK308017|SNX5|27131|sorting nexin 5##AK296947|SNX5|27131|sorting nexin 5##BC000100|SNX5|27131|sorting nexin 5##AF121855|SNX5|27131|sorting nexin 5##NM_152227|SNX5|27131|sorting nexin 5##BT007191|SNX5|27131|sorting nexin 5##AK223308|SNX5|27131|sorting nexin 5##AK001793|SNX5|27131|sorting nexin 5##AK129505|SNX5|27131|sorting nexin 5##NM_014426|SNX5|27131|sorting nexin 5##BC093623|SNX5|27131|sorting nexin 5##BC093980|SNX5|27131|sorting nexin 5##BC143274|SNX5|27131|sorting nexin 5##AK022284|OVOL2|58495|ovo-like 2 (Drosophila)##NM_021220|OVOL2|58495|ovo-like 2 (Drosophila)##BC006148|OVOL2|58495|ovo-like 2 (Drosophila)##NM_001164811|PET117|100303755|cytochrome c oxidase assembly factor-like##AY358666|PET117|100303755|cytochrome c oxidase assembly factor-like##NM_020536|CSRP2BP|57325|CSRP2 binding protein##BC007537|CSRP2BP|57325|CSRP2 binding protein	0.664753	CTCF.p2:-1:0.665
chr21	37485187	37485341	reg1004584.p2	12.968	+	TSC_hg19_v1_chr21_+_37442321 AK294142 J04056 AK308691 AK311219 BC015640 AK314879 BC002511 DQ892353 DQ895559 BT019843 CR541708	-42909	+	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	-43011	+	BC036556 TSC_hg19_v1_chr21_-_37432809 AK300009 NM_017438	-52448	-	AB041012 NM_001236 AB124847 TSC_hg19_v1_chr21_+_37507383 AK223429 BC002812 AB004854 CR541709	22085	+	TSC_hg19_v1_chr21_-_37528616 AB004851 BC037580 BC047014	43367	-	AJ237839 NM_005128	51574	+	AK294142|CBR1|873|carbonyl reductase 1##J04056|CBR1|873|carbonyl reductase 1##AK308691|CBR1|873|carbonyl reductase 1##AK311219|CBR1|873|carbonyl reductase 1##BC015640|CBR1|873|carbonyl reductase 1##AK314879|CBR1|873|carbonyl reductase 1##BC002511|CBR1|873|carbonyl reductase 1##DQ892353|CBR1|873|carbonyl reductase 1##DQ895559|CBR1|873|carbonyl reductase 1##BT019843|CBR1|873|carbonyl reductase 1##CR541708|CBR1|873|carbonyl reductase 1##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1##BC036556|SETD4|54093|SET domain containing 4##AK300009|SETD4|54093|SET domain containing 4##NM_017438|SETD4|54093|SET domain containing 4##AB041012|CBR3|874|carbonyl reductase 3##NM_001236|CBR3|874|carbonyl reductase 3##AB124847|CBR3|874|carbonyl reductase 3##AK223429|CBR3|874|carbonyl reductase 3##BC002812|CBR3|874|carbonyl reductase 3##AB004854|CBR3|874|carbonyl reductase 3##CR541709|CBR3|874|carbonyl reductase 3##AB004851|LOC100506428|100506428|uncharacterized LOC100506428##BC037580|LOC100506428|100506428|uncharacterized LOC100506428##BC047014|LOC100506428|100506428|uncharacterized LOC100506428##AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2	0.968035	CTCF.p2:0:0.968
chr10	61792645	61792784	reg1005898.p1	12.967	+	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-126390	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	-126513	-	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-322990	-	AK292927 AK092527 NM_001149	108002	-	U13616 NM_020987	356846	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	539976	-	BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##S72869|CCDC6|8030|coiled-coil domain containing 6##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.775499	CTCF.p2:14:0.775
chr20	11524824	11524940	reg1003104.p2	12.966	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-870313	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	-870678	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-1108906	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	346567	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	373675	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	1464759	+	BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3	0.983676	CTCF.p2:11:0.984
chr12	45937719	45937852	reg1004674.p1	12.965	+	AL832340 NM_001142678	-251320	+	TSC_hg19_v1_chr12_+_45609916 BC098410	-327878	+	TSC_hg19_v1_chr12_+_45609867 AK302819 NM_001142680	-327914	+	TSC_hg19_v1_chr12_-_46121280 BC037237 BC008245	183488	-	TSC_hg19_v1_chr12_-_46121531 BC047417	183745	-	TSC_hg19_v1_chr12_+_46123488 AK127872	185698	+	AL832340|ANO6|196527|anoctamin 6##NM_001142678|ANO6|196527|anoctamin 6##BC098410|ANO6|196527|anoctamin 6##AK302819|ANO6|196527|anoctamin 6##NM_001142680|ANO6|196527|anoctamin 6##BC037237|LOC400027|400027|uncharacterized LOC400027##BC008245|LOC400027|400027|uncharacterized LOC400027##BC047417|LOC400027|400027|uncharacterized LOC400027##AK127872|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)	0.054386	
chr16	78804562	78804703	reg1006760.p1	12.965	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-671177	+	NM_001244755	-741647	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	-748182	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	829983	-	AF125108 NM_130897 BC054892 BC035232	1770256	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	2033415	-	NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2	0.999486	CTCF.p2:20:0.999
chr6	112633288	112633403	reg1005577.p1	12.965	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-57450	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-57540	-	S78569 TSC_hg19_v1_chr6_-_112575748 BC004241 AK304401 BC026237	-57616	-	AK122906 NM_001013734	35186	+	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	1545389	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	1658927	-	BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##S78569|LAMA4|3910|laminin, alpha 4##BC004241|LAMA4|3910|laminin, alpha 4##AK304401|LAMA4|3910|laminin, alpha 4##BC026237|LAMA4|3910|laminin, alpha 4##AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2	0.567299	CTCF.p2:11:0.567
chr1	219986073	219986210	reg1007169.p1	12.964	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-638899	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-638983	+	M19154 TSC_hg19_v1_chr1_+_218519634	-1466536	+	BC036078 TSC_hg19_v1_chr1_-_220101540	115388	-	AB464233 TSC_hg19_v1_chr1_-_220101784	115650	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	115824	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.971592	CTCF.p2:13:0.972
chr15	59793830	59793971	reg1006384.p1	12.964	+	TSC_hg19_v1_chr15_+_59730403 BC022537 NM_152450 AK299220 AK307975	-63550	+	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	-128830	-	TSC_hg19_v1_chr15_-_59665065 AK291688	-128834	-	TSC_hg19_v1_chr15_+_59903981 NM_004751 EF152283	110083	+	TSC_hg19_v1_chr15_+_59904093 BC017032	110206	+	TSC_hg19_v1_chr15_+_59908724 AF102542	114855	+	BC022537|FAM81A|145773|family with sequence similarity 81, member A##NM_152450|FAM81A|145773|family with sequence similarity 81, member A##AK299220|FAM81A|145773|family with sequence similarity 81, member A##AK307975|FAM81A|145773|family with sequence similarity 81, member A##BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##NM_004751|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##EF152283|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##BC017032|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##AF102542|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type	0.941164	CTCF.p2:7:0.941
chr6	24360003	24360160	reg1005316.p1	12.964	+	AF181721 NM_016356	-1802	-	AF181722 NM_181337	-2951	+	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	-233651	+	BC050704 NM_001195610	23438	-	TSC_hg19_v1_chr6_+_24403163 NM_020662 AK297418 AK299825 AF288288 BC069009 AK054587 AK291058 AK298849 BC001028 BC018833 AF293076 CU686695	43127	+	L11702 CU676688 AY007546 BC093645 BC112001 L11701 AK310692 BC020748 NM_177483 AJ308108 NM_001503	129712	-	AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1##AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##BC050704|DCDC2|51473|doublecortin domain containing 2##NM_001195610|DCDC2|51473|doublecortin domain containing 2##NM_020662|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK297418|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK299825|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AF288288|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC069009|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK054587|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK291058|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK298849|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC001028|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC018833|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AF293076|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##L11702|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AY007546|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC093645|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC112001|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##L11701|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310692|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC020748|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_177483|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AJ308108|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_001503|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1	0.685671	CTCF.p2:2:0.686
chr9	4924355	4924487	reg1006500.p1	12.964	+	TSC_hg19_v1_chr9_+_4839769 EF553527	-84653	+	TSC_hg19_v1_chr9_+_4792995 AJ276894 EU831474 EU831561 AF067172	-131378	+	TSC_hg19_v1_chr9_+_4792936 AK022904 BC001025 AK225872	-131498	+	TSC_hg19_v1_chr9_+_4985085 AK292525	60666	+	TSC_hg19_v1_chr9_+_4985271 AF005216 NM_004972 AF058925	60838	+	AF135824 HQ258002 AF156094 NM_007179 BC126473 BC126475	261192	-	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1##AJ276894|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831474|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831561|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF067172|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK022904|RCL1|10171|RNA terminal phosphate cyclase-like 1##BC001025|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK225872|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK292525|JAK2|3717|Janus kinase 2##AF005216|JAK2|3717|Janus kinase 2##NM_004972|JAK2|3717|Janus kinase 2##AF058925|JAK2|3717|Janus kinase 2##AF135824|INSL6|11172|insulin-like 6##HQ258002|INSL6|11172|insulin-like 6##AF156094|INSL6|11172|insulin-like 6##NM_007179|INSL6|11172|insulin-like 6##BC126473|INSL6|11172|insulin-like 6##BC126475|INSL6|11172|insulin-like 6	1.937353	CTCF.p2:-2:0.992	CTCF.p2:-52:0.945
chr15	63902469	63902602	reg1005722.p1	12.963	+	BC017581 BC036918 AK093077 TSC_hg19_v1_chr15_-_63893135	-9493	-	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	-12956	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	-105658	+	TSC_hg19_v1_chr15_-_64126081 U50078	223549	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	223585	-	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	223605	-	BC017581|LOC100130855|100130855|uncharacterized LOC100130855##BC036918|LOC100130855|100130855|uncharacterized LOC100130855##AK093077|LOC100130855|100130855|uncharacterized LOC100130855##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	0.934632	CTCF.p2:-5:0.935
chr6	39948955	39949052	reg1003302.p1	12.963	+	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-46789	-	AB527188 AJ224328 NM_005943	-53618	-	NM_015345 AL833083 BC128388	-188185	+	BC142616 AB033072 NM_020737 AK291474	606141	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	1057946	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	1061343	+	AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2	0.974119	CTCF.p2:-4:0.974
chr12	9903468	9903596	reg1006012.p1	12.962	+	AF518873 BC093857 BC093859 NM_001253748 NM_001253750 NM_172004	-17656	-	BC063128 NM_001197318 NM_013269 AK310150 NM_001004419 AK310554 AK313554 BC019883 AF133299 AF285087 CU676474 FN813349 FN813350 FN813351 NM_001197317 NM_001197319	-81265	+	TSC_hg19_v1_chr12_+_9800760 AK096274	-102636	+	AY238518 CU675505 DQ893175 DQ896474 L07555 AK291869 AK303174 AK303383 BC007037 NM_001781 Z22576	9923	-	AF175206 AF175207 AF267244 AF267245 NM_016523 AJ305370 BC096734 BC098166 BC098257 BC098354	76564	+	X96719 AY142147 AB015628 BC005254 AK311232 TSC_hg19_v1_chr12_-_10021954 AK313916 AK307334	118426	-	AF518873|CLECL1|160365|C-type lectin-like 1##BC093857|CLECL1|160365|C-type lectin-like 1##BC093859|CLECL1|160365|C-type lectin-like 1##NM_001253748|CLECL1|160365|C-type lectin-like 1##NM_001253750|CLECL1|160365|C-type lectin-like 1##NM_172004|CLECL1|160365|C-type lectin-like 1##BC063128|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D##NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D##AK310150|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D##AK310554|CLEC2D|29121|C-type lectin domain family 2, member D##AK313554|CLEC2D|29121|C-type lectin domain family 2, member D##BC019883|CLEC2D|29121|C-type lectin domain family 2, member D##AF133299|CLEC2D|29121|C-type lectin domain family 2, member D##AF285087|CLEC2D|29121|C-type lectin domain family 2, member D##FN813349|CLEC2D|29121|C-type lectin domain family 2, member D##FN813350|CLEC2D|29121|C-type lectin domain family 2, member D##FN813351|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D##AK096274|LOC374443|374443|CLR pseudogene##AY238518|CD69|969|CD69 molecule##DQ893175|CD69|969|CD69 molecule##DQ896474|CD69|969|CD69 molecule##L07555|CD69|969|CD69 molecule##AK291869|CD69|969|CD69 molecule##AK303174|CD69|969|CD69 molecule##AK303383|CD69|969|CD69 molecule##BC007037|CD69|969|CD69 molecule##NM_001781|CD69|969|CD69 molecule##Z22576|CD69|969|CD69 molecule##AF175206|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF175207|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267244|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267245|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##NM_016523|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AJ305370|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC096734|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098166|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098257|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098354|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##X96719|CLEC2B|9976|C-type lectin domain family 2, member B##AY142147|CLEC2B|9976|C-type lectin domain family 2, member B##AB015628|CLEC2B|9976|C-type lectin domain family 2, member B##BC005254|CLEC2B|9976|C-type lectin domain family 2, member B##AK311232|CLEC2B|9976|C-type lectin domain family 2, member B##AK313916|CLEC2B|9976|C-type lectin domain family 2, member B##AK307334|CLEC2B|9976|C-type lectin domain family 2, member B	0.999306	CTCF.p2:-13:0.999
chr15	67143642	67143760	reg1004589.p1	12.962	+	NM_001142861 U59914	-142772	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	-148142	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	-149027	+	TSC_hg19_v1_chr15_+_67358179 AK290881	214474	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	214700	+	NM_001145102 AK316017	274422	+	NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##AK290881|SMAD3|4088|SMAD family member 3##NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3	0.747475	CTCF.p2:5:0.747
chr7	97870811	97870924	reg1004957.p1	12.962	+	BC113394 BC113396 NM_177455 AB464465	-29276	+	TSC_hg19_v1_chr7_+_97736173 AB029002 BC146773 NM_014916 BC131504 AB384558 AB590084 AY130988	-134531	+	TSC_hg19_v1_chr7_-_97619350 AB528806 NM_006188	-251485	-	TSC_hg19_v1_chr7_-_97881512 AK292996 BC053591 NM_015395 AK057048	10632	-	NM_001159491 NM_015379 TSC_hg19_v1_chr7_+_97910997 AB055977 BC018737 AF041430 BC062370 BC071992	40132	+	TSC_hg19_v1_chr7_+_97911041 AF106966 HQ257947	40197	+	BC113394|BHLHA15|168620|basic helix-loop-helix family, member a15##BC113396|BHLHA15|168620|basic helix-loop-helix family, member a15##NM_177455|BHLHA15|168620|basic helix-loop-helix family, member a15##AB029002|LMTK2|22853|lemur tyrosine kinase 2##BC146773|LMTK2|22853|lemur tyrosine kinase 2##NM_014916|LMTK2|22853|lemur tyrosine kinase 2##BC131504|LMTK2|22853|lemur tyrosine kinase 2##AY130988|LMTK2|22853|lemur tyrosine kinase 2##NM_006188|OCM2|4951|oncomodulin 2##AK292996|TECPR1|25851|tectonin beta-propeller repeat containing 1##BC053591|TECPR1|25851|tectonin beta-propeller repeat containing 1##NM_015395|TECPR1|25851|tectonin beta-propeller repeat containing 1##AK057048|TECPR1|25851|tectonin beta-propeller repeat containing 1##NM_001159491|BRI3|25798|brain protein I3##NM_015379|BRI3|25798|brain protein I3##AB055977|BRI3|25798|brain protein I3##BC018737|BRI3|25798|brain protein I3##AF041430|BRI3|25798|brain protein I3##BC062370|BRI3|25798|brain protein I3##AF106966|BRI3|25798|brain protein I3##HQ257947|BRI3|25798|brain protein I3	0.935254	CTCF.p2:0:0.935
chrX	154285759	154285878	reg1004207.p2	12.961	+	AK295164 TSC_hg19_v1_chrX_-_154255216	-30603	-	NM_023934 AJ272054 BC000255 AF320778 AK313143 BC072685 TSC_hg19_v1_chrX_+_154255191 BC108657 CU674108 AB528138 AM393227 AM393536 AY032594	-30680	+	FN811132 AX746360 X01179 K01740 BC150305 AK292902 M14113 NM_000132 AK307726	-34920	-	TSC_hg19_v1_chrX_-_154299405 BC002600 X64644 NM_001018024 NM_001018025	13629	-	TSC_hg19_v1_chrX_+_154299709 NM_001018055 NM_001242640 NM_024332	13889	+	TSC_hg19_v1_chrX_+_154299784 AK310286 X64643 AK299194 AK313544 BC002999 BC006540 AB462964 AM392829 AY438030 CU678330 AK298886	13972	+	AK295164|F8|2157|coagulation factor VIII, procoagulant component##NM_023934|FUNDC2|65991|FUN14 domain containing 2##AJ272054|FUNDC2|65991|FUN14 domain containing 2##BC000255|FUNDC2|65991|FUN14 domain containing 2##AF320778|FUNDC2|65991|FUN14 domain containing 2##AK313143|FUNDC2|65991|FUN14 domain containing 2##BC072685|FUNDC2|65991|FUN14 domain containing 2##BC108657|FUNDC2|65991|FUN14 domain containing 2##AM393227|FUNDC2|65991|FUN14 domain containing 2##AM393536|FUNDC2|65991|FUN14 domain containing 2##AY032594|FUNDC2|65991|FUN14 domain containing 2##FN811132|F8|2157|coagulation factor VIII, procoagulant component##AX746360|F8|2157|coagulation factor VIII, procoagulant component##X01179|F8|2157|coagulation factor VIII, procoagulant component##K01740|F8|2157|coagulation factor VIII, procoagulant component##AK292902|F8|2157|coagulation factor VIII, procoagulant component##M14113|F8|2157|coagulation factor VIII, procoagulant component##NM_000132|F8|2157|coagulation factor VIII, procoagulant component##AK307726|F8|2157|coagulation factor VIII, procoagulant component##BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##NM_001018025|MTCP1|4515|mature T-cell proliferation 1##NM_001018055|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_001242640|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_024332|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK310286|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##X64643|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK299194|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK313544|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC002999|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC006540|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AM392829|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AY438030|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK298886|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3	0.991337	CTCF.p2:-8:0.991
chr12	53273396	53273506	reg1002001.p1	12.960	+	AB463817 AX721217 AK298636 AK096419 AK290901 NM_173352	-30705	-	AJ564105 BC063648 NM_175834 BC039148	-45382	-	CU692074 EU832356 EU832441 BC042174 X67683 BC012867 AK098110 AK296582 AK299394 AK299400 AK299451 AK307941 NM_002272	-65580	-	CU687300 AB528612 AM392826 AM392892 DQ892637 DQ895875 U76549 M34225 M26512 BC075839 BC073760 X74929 BC000654 Z36777 BC063513 TSC_hg19_v1_chr12_-_53298839 AK222941 D28446 NM_002273	25365	-	NM_199187 AK308506	69210	+	NM_000224 TSC_hg19_v1_chr12_+_53342874	69410	+	AK298636|KRT78|196374|keratin 78##AK096419|KRT78|196374|keratin 78##AK290901|KRT78|196374|keratin 78##NM_173352|KRT78|196374|keratin 78##AJ564105|KRT79|338785|keratin 79##BC063648|KRT79|338785|keratin 79##NM_175834|KRT79|338785|keratin 79##BC039148|KRT79|338785|keratin 79##EU832356|KRT4|3851|keratin 4##EU832441|KRT4|3851|keratin 4##BC042174|KRT4|3851|keratin 4##X67683|KRT4|3851|keratin 4##BC012867|KRT4|3851|keratin 4##AK098110|KRT4|3851|keratin 4##AK296582|KRT4|3851|keratin 4##AK299394|KRT4|3851|keratin 4##AK299400|KRT4|3851|keratin 4##AK299451|KRT4|3851|keratin 4##AK307941|KRT4|3851|keratin 4##NM_002272|KRT4|3851|keratin 4##AM392826|KRT8|3856|keratin 8##AM392892|KRT8|3856|keratin 8##DQ892637|KRT8|3856|keratin 8##DQ895875|KRT8|3856|keratin 8##U76549|KRT8|3856|keratin 8##M34225|KRT8|3856|keratin 8##M26512|KRT8|3856|keratin 8##BC075839|KRT8|3856|keratin 8##BC073760|KRT8|3856|keratin 8##X74929|KRT8|3856|keratin 8##BC000654|KRT8|3856|keratin 8##Z36777|KRT8|3856|keratin 8##BC063513|KRT8|3856|keratin 8##AK222941|KRT8|3856|keratin 8##NM_002273|KRT8|3856|keratin 8##NM_199187|KRT18|3875|keratin 18##AK308506|KRT18|3875|keratin 18##NM_000224|KRT18|3875|keratin 18	1.664528	CTCF.p2:19:0.737	CTCF.p2:-34:0.927
chr15	51484989	51485126	reg1006513.p1	12.960	+	AY517501 NM_207381	-87585	-	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	-98207	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	-284130	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	145707	-	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	148737	+	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	429916	-	AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2	1.067148	CTCF.p2:-1:0.985
chr6	144540351	144540475	reg1004480.p1	12.960	+	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	-68692	+	NM_031287 TSC_hg19_v1_chr6_-_144416757	-123651	-	AB528231 AM393071 BC000198 TSC_hg19_v1_chr6_-_144416703 AK312079 AK074417	-123742	-	TSC_hg19_v1_chr6_+_144607461 AK292506	67067	+	NM_007124 X69086	72505	+	AK124757 TSC_hg19_v1_chr6_+_146056061	1515621	+	NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11##NM_031287|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AM393071|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##BC000198|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK312079|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK074417|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK292506|UTRN|7402|utrophin##NM_007124|UTRN|7402|utrophin##X69086|UTRN|7402|utrophin##AK124757|LOC100507557|100507557|uncharacterized LOC100507557	0.955677	CTCF.p2:11:0.956
chr10	129876902	129877026	reg1004863.p1	12.959	+	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	-31110	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-171509	+	TSC_hg19_v1_chr10_+_129705334 BC031078 NM_006504	-171642	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	47564	-	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	1388507	+	TSC_hg19_v1_chr10_+_131265507 BC000824	1388550	+	BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC031078|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_006504|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase	0.972317	CTCF.p2:-20:0.972
chr20	19564571	19564695	reg1006781.p1	12.959	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	-371180	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	-371348	+	NM_001242671	-753795	-	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	302510	+	BC128065 NM_018993 TSC_hg19_v1_chr20_+_19870217 AB060339	305594	+	TSC_hg19_v1_chr20_+_19915762 BC034698 AL136924	351116	+	AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2##BC128065|RIN2|54453|Ras and Rab interactor 2##NM_018993|RIN2|54453|Ras and Rab interactor 2##AB060339|RIN2|54453|Ras and Rab interactor 2##BC034698|RIN2|54453|Ras and Rab interactor 2##AL136924|RIN2|54453|Ras and Rab interactor 2	0.010882	
chr7	76071283	76071410	reg1006148.p1	12.959	+	X56777 M60504 NM_001110354	-17085	+	BC113840 AK172783 AJ312755 NM_080744	-32394	-	TSC_hg19_v1_chr7_+_76026838 AK292763 NM_007155 BC113949	-44503	+	NM_001102594 NM_001102595 NM_020892 BC018555 DQ010329 AK293226 TSC_hg19_v1_chr7_+_76091025 AK023924 AB040961 BC008856 BC026059 BC093079	19681	+	AY225124 AY225125 CU679151 DQ893264 DQ896593 NM_001102596	38480	+	NM_030570 NM_182684 AK290096 AY233462 BC004304 AK056760 CU678662	68510	+	X56777|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##M60504|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_001110354|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##BC113840|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##AK172783|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##AJ312755|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##NM_080744|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##AK292763|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_007155|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##BC113949|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_001102594|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102595|DTX2|113878|deltex homolog 2 (Drosophila)##NM_020892|DTX2|113878|deltex homolog 2 (Drosophila)##BC018555|DTX2|113878|deltex homolog 2 (Drosophila)##DQ010329|DTX2|113878|deltex homolog 2 (Drosophila)##AK293226|DTX2|113878|deltex homolog 2 (Drosophila)##AK023924|DTX2|113878|deltex homolog 2 (Drosophila)##AB040961|DTX2|113878|deltex homolog 2 (Drosophila)##BC008856|DTX2|113878|deltex homolog 2 (Drosophila)##BC026059|DTX2|113878|deltex homolog 2 (Drosophila)##BC093079|DTX2|113878|deltex homolog 2 (Drosophila)##AY225124|DTX2|113878|deltex homolog 2 (Drosophila)##AY225125|DTX2|113878|deltex homolog 2 (Drosophila)##DQ893264|DTX2|113878|deltex homolog 2 (Drosophila)##DQ896593|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102596|DTX2|113878|deltex homolog 2 (Drosophila)##NM_030570|UPK3B|80761|uroplakin 3B##NM_182684|UPK3B|80761|uroplakin 3B##AK290096|UPK3B|80761|uroplakin 3B##AY233462|UPK3B|80761|uroplakin 3B##BC004304|UPK3B|80761|uroplakin 3B##AK056760|UPK3B|80761|uroplakin 3B	0.170045	
chr8	141841315	141841459	reg1005782.p1	12.959	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-195763	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-319824	+	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	-319995	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	169869	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	297350	+	AK128212 NM_001080431	397285	-	BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4	0.99316	CTCF.p2:-9:0.993
chr1	117117362	117117491	reg1006151.p1	12.957	+	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	-3749	-	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	-3811	-	TSC_hg19_v1_chr1_-_116961216 AK309389	-156188	-	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	92957	-	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	179681	+	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	335216	+	AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK309389|ATP1A1OS|84852|ATP1A1 opposite strand##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3##AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator	0.985356	CTCF.p2:-6:0.985
chr1	19210760	19210874	reg1004526.p2	12.957	+	NM_152232 AB527225	-24662	-	NM_001135254 NM_002584 NM_013945 X96743	-253318	+	NM_152375	-403394	+	AK294552 NM_001161504	6567	-	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	18337	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	71982	-	NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##NM_152375|KLHDC7A|127707|kelch domain containing 7A##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001136265|IFFO2|126917|intermediate filament family orphan 2	0.0	
chr3	53230048	53230185	reg1005194.p2	12.957	+	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	-34897	+	TSC_hg19_v1_chr3_-_53164452 AJ318099 BC043595 NM_052859	-65665	-	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	-150053	-	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	59895	-	TSC_hg19_v1_chr3_-_53290099 NM_001064 NM_001135055	59998	-	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	151477	-	BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##AJ318099|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043595|RFT1|91869|RFT1 homolog (S. cerevisiae)##NM_052859|RFT1|91869|RFT1 homolog (S. cerevisiae)##AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase##NM_001064|TKT|7086|transketolase##NM_001135055|TKT|7086|transketolase##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	0.998821	CTCF.p2:0:0.999
chr4	78279610	78279722	reg1005246.p1	12.957	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-200173	+	TSC_hg19_v1_chr4_+_78078398 U47414	-201206	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	-201305	+	AF044197 NM_006419	153239	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	460878	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	504248	+	L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1	0.997372	CTCF.p2:12:0.997
chr2	56418899	56419026	reg1005189.p2	12.956	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-6053	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-7196	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-7757	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	1854792	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	1855026	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	2049520	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.91922	CTCF.p2:-21:0.919
chr3	159040257	159040385	reg1006430.p1	12.956	+	TSC_hg19_v1_chr3_+_158991090 AK314662	-49230	+	BC036535 NM_001197107 NM_001197108 NM_014575 TSC_hg19_v1_chr3_+_158991047	-49279	+	TSC_hg19_v1_chr3_+_158787146 BC137464 BC137469 BC144658	-253170	+	TSC_hg19_v1_chr3_+_159481881 AK309223	441641	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	517372	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	517538	+	AK314662|SCHIP1|29970|schwannomin interacting protein 1##BC036535|SCHIP1|29970|schwannomin interacting protein 1##NM_001197107|SCHIP1|29970|schwannomin interacting protein 1##NM_001197108|SCHIP1|29970|schwannomin interacting protein 1##NM_014575|SCHIP1|29970|schwannomin interacting protein 1##BC137464|IQCJ|654502|IQ motif containing J##BC137469|IQCJ|654502|IQ motif containing J##BC144658|IQCJ|654502|IQ motif containing J##AK309223|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##BC005947|SCHIP1|29970|schwannomin interacting protein 1	0.807135	CTCF.p2:0:0.807
chr1	160967243	160967352	reg1005145.p1	12.955	+	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	-42738	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	-112339	-	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	-134719	-	BT020103 CR533512 DQ892228 DQ895428 EU831648 EU831732 AB528601 AF207907 AK304412 TSC_hg19_v1_chr1_-_160990931 BC001533 AY358896 AK026665 AF154005 AK075152 AL136649	23601	-	TSC_hg19_v1_chr1_-_160990981 NM_016946	23754	-	AF191495 TSC_hg19_v1_chr1_-_161008713 BC001699 BC038219	41417	-	HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BT020103|F11R|50848|F11 receptor##CR533512|F11R|50848|F11 receptor##DQ892228|F11R|50848|F11 receptor##DQ895428|F11R|50848|F11 receptor##EU831648|F11R|50848|F11 receptor##EU831732|F11R|50848|F11 receptor##AF207907|F11R|50848|F11 receptor##AK304412|F11R|50848|F11 receptor##BC001533|F11R|50848|F11 receptor##AY358896|F11R|50848|F11 receptor##AK026665|F11R|50848|F11 receptor##AF154005|F11R|50848|F11 receptor##AK075152|F11R|50848|F11 receptor##AL136649|F11R|50848|F11 receptor##NM_016946|F11R|50848|F11 receptor##BC001699|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##BC038219|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1	0.979807	CTCF.p2:-3:0.980
chr12	111889562	111889701	reg1004138.p1	12.954	+	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	-45882	+	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	-82721	-	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	-82785	-	AK126309 TSC_hg19_v1_chr12_-_111893987	4292	-	TSC_hg19_v1_chr12_-_112036257 AK095017	146644	-	TSC_hg19_v1_chr12_-_112036908 AK307803	147282	-	AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##AK095017|ATXN2|6311|ataxin 2##AK307803|ATXN2|6311|ataxin 2	0.998327	CTCF.p2:31:0.998
chr2	27414512	27414659	reg1004861.p2	12.954	+	TSC_hg19_v1_chr2_+_27371895 BC137191 BC137192 BC144525 NM_175769	-42684	+	BC045671 NM_178553	-52281	-	TSC_hg19_v1_chr2_-_27357519 BC041032 NM_013388	-57038	-	AK314545 TSC_hg19_v1_chr2_-_27434795 AF442150	20152	-	TSC_hg19_v1_chr2_+_27434908 NM_080592	20307	+	AK027855 AF069307 AF442149 AF288781 TSC_hg19_v1_chr2_-_27435166 NM_021095	20510	-	BC137191|TCF23|150921|transcription factor 23##BC137192|TCF23|150921|transcription factor 23##BC144525|TCF23|150921|transcription factor 23##NM_175769|TCF23|150921|transcription factor 23##BC045671|C2orf53|339779|chromosome 2 open reading frame 53##NM_178553|C2orf53|339779|chromosome 2 open reading frame 53##BC041032|PREB|10113|prolactin regulatory element binding##NM_013388|PREB|10113|prolactin regulatory element binding##AK314545|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6##AF442150|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6##NM_080592|C2orf28|51374|chromosome 2 open reading frame 28##AK027855|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6##AF069307|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6##AF442149|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6##AF288781|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6##NM_021095|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	0.207081	CTCF.p2:-1:0.207
chr14	91885238	91885380	reg1005670.p1	12.952	+	TSC_hg19_v1_chr14_-_91884165 NM_001080414	-1134	-	TSC_hg19_v1_chr14_-_91884159 AF070587	-1161	-	BC098567 NM_003485	-165115	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	91191	-	TSC_hg19_v1_chr14_-_91976644 NM_032560	91328	-	TSC_hg19_v1_chr14_-_91976823 AK000714 BC038932 BC022778	91498	-	NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##NM_032560|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AK000714|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##BC038932|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##BC022778|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.550464	CTCF.p2:15:0.550
chr6	13195229	13195355	reg1006349.p1	12.952	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-478249	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-478349	+	TSC_hg19_v1_chr6_+_12514301 D28417	-680990	+	AK091836 AX747210 NM_001242698	100525	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	133408	-	AK027010 NM_001242630	213076	-	AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.921764	CTCF.p2:-7:0.922
chr4	154064218	154064345	reg1004794.p1	12.951	+	NM_033393 AB051514	-200091	+	TSC_hg19_v1_chr4_+_153701117 AK290472 U52521 BC103759 BC105114 BC105116 BC143675 BC143676 AK096509	-363154	+	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	-363260	+	BC011052 NM_001130067	9988	+	TSC_hg19_v1_chr4_+_154125594 AK308731 NM_015271 AB011089 AF220018	61324	+	TSC_hg19_v1_chr4_+_154178530 BC025417	114258	+	NM_033393|FHDC1|85462|FH2 domain containing 1##AB051514|FHDC1|85462|FH2 domain containing 1##AK290472|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##U52521|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC103759|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105114|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105116|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143675|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143676|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK096509|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC011052|TRIM2|23321|tripartite motif containing 2##NM_001130067|TRIM2|23321|tripartite motif containing 2##AK308731|TRIM2|23321|tripartite motif containing 2##NM_015271|TRIM2|23321|tripartite motif containing 2##AB011089|TRIM2|23321|tripartite motif containing 2##AF220018|TRIM2|23321|tripartite motif containing 2##BC025417|TRIM2|23321|tripartite motif containing 2	0.480013	CTCF.p2:-1:0.480
chr16	78739713	78739860	reg1005693.p1	12.950	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-606331	+	NM_001244755	-676801	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	-683336	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	894829	-	AF125108 NM_130897 BC054892 BC035232	1835102	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	2098261	-	NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2	0.995582	CTCF.p2:-27:0.996
chr4	111432228	111432367	reg1004608.p2	12.948	+	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	-34924	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	-312512	-	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-598250	+	AK313987 TSC_hg19_v1_chr4_-_111543909	111613	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	111978	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	125872	-	AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK313987|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2	0.999588	CTCF.p2:7:1.000
chr11	94058995	94059108	reg1004598.p2	12.947	+	NM_001199206	-20249	+	TSC_hg19_v1_chr11_+_93862307 AY359023 FM201789	-196731	+	AK074897 TSC_hg19_v1_chr11_+_93862143 AF093239	-196900	+	TSC_hg19_v1_chr11_-_94134589 AK315161 NM_016540	75531	-	U37359 TSC_hg19_v1_chr11_-_94227011 BC017823 BC005241 AK095388 AF022778 AK308318 NM_005590 NM_005591	167922	-	TSC_hg19_v1_chr11_+_94227168 NM_017704 AF025354 AK000196 BC017798 AK000448 AL833977	168107	+	NM_001199206|FOLR4|390243|folate receptor 4 (delta) homolog (mouse)##AY359023|PANX1|24145|pannexin 1##FM201789|PANX1|24145|pannexin 1##AK074897|PANX1|24145|pannexin 1##AF093239|PANX1|24145|pannexin 1##AK315161|GPR83|10888|G protein-coupled receptor 83##NM_016540|GPR83|10888|G protein-coupled receptor 83##U37359|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC017823|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC005241|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK095388|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AF022778|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK308318|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005590|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005591|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_017704|ANKRD49|54851|ankyrin repeat domain 49##AF025354|ANKRD49|54851|ankyrin repeat domain 49##AK000196|ANKRD49|54851|ankyrin repeat domain 49##BC017798|ANKRD49|54851|ankyrin repeat domain 49##AK000448|ANKRD49|54851|ankyrin repeat domain 49##AL833977|ANKRD49|54851|ankyrin repeat domain 49	0.99622	CTCF.p2:-6:0.996
chr19	18958119	18958251	reg1006640.p1	12.947	+	TSC_hg19_v1_chr19_+_18942822 U65533 AF074016 D86988 U59323	-15372	+	TSC_hg19_v1_chr19_+_18942742 NM_002911 BC039817	-15440	+	AB086984 BC033676 BC110847 L32137 BC125092 TSC_hg19_v1_chr19_-_18902115 AK074508 AK223216 AK290595 AK296586 AK297798 AK297814 NM_000095	-56088	-	BC032615 TSC_hg19_v1_chr19_-_19006935 M62302 BC022450 NM_001492 NM_021267 NM_198207	48766	-	TSC_hg19_v1_chr19_-_19007395 BC084582 AK293463	49280	-	AB528108 AM393761 CR456886 DQ893417 DQ896735 TSC_hg19_v1_chr19_-_19030164 BC017285 BC003155 AJ249366 AL136928 BC007250	71980	-	U65533|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##AF074016|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##D86988|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##U59323|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##NM_002911|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##BC039817|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##AB086984|COMP|1311|cartilage oligomeric matrix protein##BC033676|COMP|1311|cartilage oligomeric matrix protein##BC110847|COMP|1311|cartilage oligomeric matrix protein##L32137|COMP|1311|cartilage oligomeric matrix protein##BC125092|COMP|1311|cartilage oligomeric matrix protein##AK074508|COMP|1311|cartilage oligomeric matrix protein##AK223216|COMP|1311|cartilage oligomeric matrix protein##AK290595|COMP|1311|cartilage oligomeric matrix protein##AK296586|COMP|1311|cartilage oligomeric matrix protein##AK297798|COMP|1311|cartilage oligomeric matrix protein##AK297814|COMP|1311|cartilage oligomeric matrix protein##NM_000095|COMP|1311|cartilage oligomeric matrix protein##BC032615|CERS1|10715|ceramide synthase 1##M62302|GDF1|2657|growth differentiation factor 1##NM_001492|GDF1|2657|growth differentiation factor 1##NM_021267|CERS1|10715|ceramide synthase 1##NM_198207|CERS1|10715|ceramide synthase 1##BC084582|CERS1|10715|ceramide synthase 1##AM393761|COPE|11316|coatomer protein complex, subunit epsilon##CR456886|COPE|11316|coatomer protein complex, subunit epsilon##DQ893417|COPE|11316|coatomer protein complex, subunit epsilon##DQ896735|COPE|11316|coatomer protein complex, subunit epsilon##BC017285|COPE|11316|coatomer protein complex, subunit epsilon##BC003155|COPE|11316|coatomer protein complex, subunit epsilon##AJ249366|COPE|11316|coatomer protein complex, subunit epsilon##AL136928|COPE|11316|coatomer protein complex, subunit epsilon##BC007250|COPE|11316|coatomer protein complex, subunit epsilon	0.996964	CTCF.p2:8:0.997
chr2	213551163	213551287	reg1004012.p1	12.947	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	-147910	-	AK316425 NM_001122634 AK302778 AY317138	-2093140	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-2129836	+	AK301503 AF130863 NM_016260	463830	-	BC028936 NM_001079526	465107	-	AK124960 NM_001242575	597703	-	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451	0.94867	CTCF.p2:-15:0.949
chr7	24705407	24705524	reg1004283.p2	12.947	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	-92377	+	BC029497 NM_000905 AK312156 K01911 M15789	-381622	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-955549	+	TSC_hg19_v1_chr7_-_24797042 BC099911	91572	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	91602	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	91874	-	BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5	0.998888	CTCF.p2:7:0.999
chr11	63403440	63403557	reg1004869.p1	12.946	+	NM_001128203 TSC_hg19_v1_chr11_-_63381941	-21557	-	AK313075 NM_007069 TSC_hg19_v1_chr11_-_63381909	-21589	-	BC001387 TSC_hg19_v1_chr11_-_63381880 X92814	-21630	-	TSC_hg19_v1_chr11_-_63438892 AK023383 CU687312 AL117600 BC005096	35355	-	TSC_hg19_v1_chr11_-_63439066 NM_015459 CR936784 BC077727	35572	-	TSC_hg19_v1_chr11_+_63448971 NM_006054 NM_201428 NM_201429 NM_201430 AY427821 AY750848 AK309766 AK075412 AK297533 AK304100 AK307811 BC011394 AK295534 AK308083 BC022993 AB209771 AF059524 AK222898 AF119297 BC100822 BC100823 BC118550 BC118628 AK295758 BC010556 BC105982 BC000634 AK295361 BC105981 AK297529 AB591013 CU679745 AK127079	45548	+	NM_001128203|PLA2G16|11145|phospholipase A2, group XVI##AK313075|PLA2G16|11145|phospholipase A2, group XVI##NM_007069|PLA2G16|11145|phospholipase A2, group XVI##BC001387|PLA2G16|11145|phospholipase A2, group XVI##X92814|PLA2G16|11145|phospholipase A2, group XVI##AK023383|ATL3|25923|atlastin GTPase 3##AL117600|ATL3|25923|atlastin GTPase 3##NM_015459|ATL3|25923|atlastin GTPase 3##CR936784|ATL3|25923|atlastin GTPase 3##BC077727|ATL3|25923|atlastin GTPase 3##NM_006054|RTN3|10313|reticulon 3##NM_201428|RTN3|10313|reticulon 3##NM_201429|RTN3|10313|reticulon 3##NM_201430|RTN3|10313|reticulon 3##AY427821|RTN3|10313|reticulon 3##AY750848|RTN3|10313|reticulon 3##AK309766|RTN3|10313|reticulon 3##AK075412|RTN3|10313|reticulon 3##AK297533|RTN3|10313|reticulon 3##AK304100|RTN3|10313|reticulon 3##AK307811|RTN3|10313|reticulon 3##BC011394|RTN3|10313|reticulon 3##AK295534|RTN3|10313|reticulon 3##AK308083|RTN3|10313|reticulon 3##BC022993|RTN3|10313|reticulon 3##AB209771|RTN3|10313|reticulon 3##AF059524|RTN3|10313|reticulon 3##AK222898|RTN3|10313|reticulon 3##AF119297|RTN3|10313|reticulon 3##BC100822|RTN3|10313|reticulon 3##BC100823|RTN3|10313|reticulon 3##BC118550|RTN3|10313|reticulon 3##BC118628|RTN3|10313|reticulon 3##AK295758|RTN3|10313|reticulon 3##BC010556|RTN3|10313|reticulon 3##BC105982|RTN3|10313|reticulon 3##BC000634|RTN3|10313|reticulon 3##AK295361|RTN3|10313|reticulon 3##BC105981|RTN3|10313|reticulon 3##AK297529|RTN3|10313|reticulon 3##AK127079|RTN3|10313|reticulon 3	0.22432	CTCF.p2:18:0.224
chr1	437920	438100	reg1003756.p2	12.946	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-70362	+	NM_001005484	-368920	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-408605	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	184032	-	TSC_hg19_v1_chr1_-_714015 BC006361	276007	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	324885	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	2.931006	CTCF.p2:-14:0.977	CTCF.p2:53:0.977	CTCF.p2:-82:0.977
chr17	40177043	40177169	reg1004383.p2	12.946	+	TSC_hg19_v1_chr17_+_40172124 AK027265 AK297975 AK054571 BC007316 BC007450	-4960	+	NM_001144927 NM_001144928 NM_001144929 NM_017595 TSC_hg19_v1_chr17_+_40172107	-5008	+	BX647209 NM_003315	-7414	-	NM_001242704	12937	-	BC014949 AK296840 AK300900 AK021416 AK225549 NM_024119	87612	-	TSC_hg19_v1_chr17_-_40273386 AB527835 AF029777 BC032743 BC105977 BC039907 NM_021078	96243	-	AK027265|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK297975|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK054571|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007316|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007450|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144927|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144928|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144929|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_017595|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BX647209|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7##NM_003315|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7##NM_001242704|ZNF385C|201181|zinc finger protein 385C##BC014949|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK296840|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK300900|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK021416|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK225549|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_024119|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AF029777|KAT2A|2648|K(lysine) acetyltransferase 2A##BC032743|KAT2A|2648|K(lysine) acetyltransferase 2A##BC105977|KAT2A|2648|K(lysine) acetyltransferase 2A##BC039907|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_021078|KAT2A|2648|K(lysine) acetyltransferase 2A	0.998932	CTCF.p2:2:0.999
chr2	100997749	100997890	reg1006976.p1	12.946	+	DQ020495 NM_198461	-58625	-	BC036895 TSC_hg19_v1_chr2_-_100759026 NM_002285	-238816	-	TSC_hg19_v1_chr2_-_100722359 AK297407 AK092327 AX747484	-275361	-	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	36278	-	AB164464 NM_001011717	89124	+	TSC_hg19_v1_chr2_+_101179454 NM_024065 BC001021 AK300827 AF110511 AF267853	181617	+	DQ020495|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##NM_198461|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##BC036895|AFF3|3899|AF4/FMR2 family, member 3##NM_002285|AFF3|3899|AF4/FMR2 family, member 3##AK297407|AFF3|3899|AF4/FMR2 family, member 3##AK092327|AFF3|3899|AF4/FMR2 family, member 3##BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S##NM_024065|PDCL3|79031|phosducin-like 3##BC001021|PDCL3|79031|phosducin-like 3##AK300827|PDCL3|79031|phosducin-like 3##AF110511|PDCL3|79031|phosducin-like 3##AF267853|PDCL3|79031|phosducin-like 3	0.9847	CTCF.p2:10:0.985
chr2	217384011	217384149	reg1006865.p1	12.946	+	NM_000998 TSC_hg19_v1_chr2_+_217363566 AK289472 BC016748 BC067789 L22154 AK023419 AK291857 BC063476 L06499 BC014262 BC082239 BC047872	-20527	+	TSC_hg19_v1_chr2_+_217277487 NM_001127207 AF432223 BC043341	-106602	+	NM_014140 TSC_hg19_v1_chr2_+_217277188 AK023780	-106882	+	TSC_hg19_v1_chr2_+_217498142 NM_000597 X16302 BC071967 AB209509 BC004312 BC009902 BC012769 M35410	114056	+	TSC_hg19_v1_chr2_+_217498216 DQ893450 EU176752	114218	+	L27560 AF147308 TSC_hg19_v1_chr2_-_217540846	156704	-	NM_000998|RPL37A|6168|ribosomal protein L37a##AK289472|RPL37A|6168|ribosomal protein L37a##BC016748|RPL37A|6168|ribosomal protein L37a##BC067789|RPL37A|6168|ribosomal protein L37a##L22154|RPL37A|6168|ribosomal protein L37a##AK023419|RPL37A|6168|ribosomal protein L37a##AK291857|RPL37A|6168|ribosomal protein L37a##BC063476|RPL37A|6168|ribosomal protein L37a##L06499|RPL37A|6168|ribosomal protein L37a##BC014262|RPL37A|6168|ribosomal protein L37a##BC082239|RPL37A|6168|ribosomal protein L37a##BC047872|RPL37A|6168|ribosomal protein L37a##NM_001127207|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AF432223|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##BC043341|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##NM_014140|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AK023780|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##DQ893450|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##EU176752|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##L27560|IGFBP5|3488|insulin-like growth factor binding protein 5##AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5	0.956701	CTCF.p2:1:0.957
chr3	71056105	71056230	reg1005848.p1	12.946	+	TSC_hg19_v1_chr3_+_70048883 BC015590	-1007279	+	NM_000248 NM_001184968 NM_198158 NM_198178 Z29678 BC012503 BC065243 BC026961 GU355676	-1070356	+	NM_198177 AB006989 AK297858	-1140766	+	TSC_hg19_v1_chr3_-_71114076 AK074569 NM_001244813	58029	-	TSC_hg19_v1_chr3_-_71179732 AK027264	123556	-	AK297649 TSC_hg19_v1_chr3_-_71179738 BX647682	123573	-	NM_000248|MITF|4286|microphthalmia-associated transcription factor##NM_001184968|MITF|4286|microphthalmia-associated transcription factor##NM_198158|MITF|4286|microphthalmia-associated transcription factor##NM_198178|MITF|4286|microphthalmia-associated transcription factor##Z29678|MITF|4286|microphthalmia-associated transcription factor##BC012503|MITF|4286|microphthalmia-associated transcription factor##BC065243|MITF|4286|microphthalmia-associated transcription factor##BC026961|MITF|4286|microphthalmia-associated transcription factor##GU355676|MITF|4286|microphthalmia-associated transcription factor##NM_198177|MITF|4286|microphthalmia-associated transcription factor##AB006989|MITF|4286|microphthalmia-associated transcription factor##AK297858|MITF|4286|microphthalmia-associated transcription factor##AK074569|FOXP1|27086|forkhead box P1##NM_001244813|FOXP1|27086|forkhead box P1##AK027264|FOXP1|27086|forkhead box P1##AK297649|FOXP1|27086|forkhead box P1##BX647682|FOXP1|27086|forkhead box P1	0.952951	CTCF.p2:-7:0.953
chr5	112942337	112942467	reg1006063.p1	12.945	+	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	-93006	+	AK128596 NM_001085377	-117876	-	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	-171770	-	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	755647	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	756059	+	BC015371 NM_170775 BC040722	826847	+	AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2##AK128596|MCC|4163|mutated in colorectal cancers##NM_001085377|MCC|4163|mutated in colorectal cancers##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	0.939688	CTCF.p2:27:0.940
chr19	13973183	13973288	reg1004708.p3	12.944	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	-26133	-	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-66990	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-87951	+	BC101209 BC101210 NM_001098622	14827	+	AK097431 NM_024323	43673	-	NM_017721 TSC_hg19_v1_chr19_+_14017006	43745	+	AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57##NM_017721|CC2D1A|54862|coiled-coil and C2 domain containing 1A	0.999638	CTCF.p2:9:1.000
chr7	5705103	5705256	reg1006438.p1	12.944	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	-72669	+	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	-72741	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-134970	-	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	116043	-	BC004947 TSC_hg19_v1_chr7_-_5821284 AK297231 BC063825 AK092767 AX747717 AK297416 BX537406 NM_207111 NM_207116 AK292396	116130	-	TSC_hg19_v1_chr7_+_5862791 AK291169 AK096288	157606	+	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216##BC004947|RNF216|54476|ring finger protein 216##AK297231|RNF216|54476|ring finger protein 216##BC063825|RNF216|54476|ring finger protein 216##AK092767|RNF216|54476|ring finger protein 216##AK297416|RNF216|54476|ring finger protein 216##BX537406|RNF216|54476|ring finger protein 216##NM_207111|RNF216|54476|ring finger protein 216##NM_207116|RNF216|54476|ring finger protein 216##AK292396|RNF216|54476|ring finger protein 216##AK291169|ZNF815|401303|zinc finger protein 815##AK096288|ZNF815|401303|zinc finger protein 815	0.223709	CTCF.p2:15:0.224
chr8	70858501	70858630	reg1005717.p1	12.944	+	AK308488 AF205075 AK096879 NM_030958	-111316	-	AK022760 NM_001146008	-112941	-	BC137424 BC144618 NM_001146009	-113162	-	TSC_hg19_v1_chr8_-_70983468 BC052311	124906	-	TSC_hg19_v1_chr8_-_70983549 AF319458 AK022595 NM_024504	124990	-	BC092442 TSC_hg19_v1_chr8_-_71315599	456982	-	AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC052311|PRDM14|63978|PR domain containing 14##AF319458|PRDM14|63978|PR domain containing 14##AK022595|PRDM14|63978|PR domain containing 14##NM_024504|PRDM14|63978|PR domain containing 14##BC092442|NCOA2|10499|nuclear receptor coactivator 2	0.875102	CTCF.p2:-4:0.875
chr1	110089030	110089144	reg1005504.p1	12.943	+	AK290027 NM_031936 AF258342	-6587	+	TSC_hg19_v1_chr1_-_110052350 BC040879 AK295678 NM_020703	-36753	-	NM_001134402 AK126707 NM_001134400 NM_001134403 NM_001134404 NM_182580 TSC_hg19_v1_chr1_+_110036712 AK299086 BX647509 AK096354 AK303546 BC093683 BC111999 BC143308 AK294992 AK128798	-52391	+	NM_006496 TSC_hg19_v1_chr1_+_110091203	2113	+	TSC_hg19_v1_chr1_+_110091227 BC025285	2138	+	TSC_hg19_v1_chr1_+_110091256 J03238 AK311691 AK312252 J03198 M27543 AB463705 DQ892862 DQ896111 CU692958 AF493907 BT019973 BT019974 J03005	2208	+	AK290027|GPR61|83873|G protein-coupled receptor 61##NM_031936|GPR61|83873|G protein-coupled receptor 61##AF258342|GPR61|83873|G protein-coupled receptor 61##BC040879|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK295678|AMIGO1|57463|adhesion molecule with Ig-like domain 1##NM_020703|AMIGO1|57463|adhesion molecule with Ig-like domain 1##NM_001134402|CYB561D1|284613|cytochrome b-561 domain containing 1##AK126707|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134400|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134403|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134404|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_182580|CYB561D1|284613|cytochrome b-561 domain containing 1##AK299086|CYB561D1|284613|cytochrome b-561 domain containing 1##BX647509|CYB561D1|284613|cytochrome b-561 domain containing 1##AK096354|CYB561D1|284613|cytochrome b-561 domain containing 1##AK303546|CYB561D1|284613|cytochrome b-561 domain containing 1##BC093683|CYB561D1|284613|cytochrome b-561 domain containing 1##BC111999|CYB561D1|284613|cytochrome b-561 domain containing 1##BC143308|CYB561D1|284613|cytochrome b-561 domain containing 1##AK294992|CYB561D1|284613|cytochrome b-561 domain containing 1##AK128798|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_006496|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##BC025285|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##J03238|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##AK311691|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##AK312252|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##J03198|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##M27543|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##DQ892862|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##DQ896111|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##AF493907|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##BT019973|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##BT019974|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##J03005|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3	0.999825	CTCF.p2:-18:1.000
chr17	36061559	36061702	reg1004590.p1	12.943	+	TSC_hg19_v1_chr17_-_36003470 AF077033 AK001652 AK093661 AX748248 BC041785 NM_007010	-58153	-	TSC_hg19_v1_chr17_-_36003446 BC006489 AB208938 CU692030	-58189	-	TSC_hg19_v1_chr17_-_35969418 AB462949 BC117313 BC143452 BC143476 BC143478 BC084536 BC090930 AF169548 AK302821 NM_001163544 NM_001163545 NM_001163546 NM_001163547 NM_007247 NM_080550 NM_198882	-92180	-	AB528419 BT007126 CR536572 DQ891528 EU176615 TSC_hg19_v1_chr17_-_36104898	43256	-	TSC_hg19_v1_chr17_-_36105051 HM116553 HM116554 HM116555 HM116556 AK290131 AK296633 AK298393 BC017714 X58840 NM_000458 NM_001165923	43421	-	NM_001123391 NM_032258 AK313329 AK302064 BC078140 BC071680 AK301823 AL136860 BC047739	222363	+	AF077033|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK001652|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK093661|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC041785|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_007010|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC006489|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AB208938|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC117313|SYNRG|11276|synergin, gamma##BC143452|SYNRG|11276|synergin, gamma##BC143476|SYNRG|11276|synergin, gamma##BC143478|SYNRG|11276|synergin, gamma##BC084536|SYNRG|11276|synergin, gamma##BC090930|SYNRG|11276|synergin, gamma##AF169548|SYNRG|11276|synergin, gamma##AK302821|SYNRG|11276|synergin, gamma##NM_001163544|SYNRG|11276|synergin, gamma##NM_001163545|SYNRG|11276|synergin, gamma##NM_001163546|SYNRG|11276|synergin, gamma##NM_001163547|SYNRG|11276|synergin, gamma##NM_007247|SYNRG|11276|synergin, gamma##NM_080550|SYNRG|11276|synergin, gamma##NM_198882|SYNRG|11276|synergin, gamma##BT007126|HNF1B|6928|HNF1 homeobox B##CR536572|HNF1B|6928|HNF1 homeobox B##DQ891528|HNF1B|6928|HNF1 homeobox B##EU176615|HNF1B|6928|HNF1 homeobox B##HM116553|HNF1B|6928|HNF1 homeobox B##HM116554|HNF1B|6928|HNF1 homeobox B##HM116555|HNF1B|6928|HNF1 homeobox B##HM116556|HNF1B|6928|HNF1 homeobox B##AK290131|HNF1B|6928|HNF1 homeobox B##AK296633|HNF1B|6928|HNF1 homeobox B##AK298393|HNF1B|6928|HNF1 homeobox B##BC017714|HNF1B|6928|HNF1 homeobox B##X58840|HNF1B|6928|HNF1 homeobox B##NM_000458|HNF1B|6928|HNF1 homeobox B##NM_001165923|HNF1B|6928|HNF1 homeobox B##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##AK313329|TBC1D3|729873|TBC1 domain family, member 3##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3	0.997263	CTCF.p2:-15:0.997
chr7	34360675	34360809	reg1005907.p1	12.943	+	AK289963 NM_133468 AK096150 BC060868	-415600	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-1191661	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-1211765	-	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	337177	+	DQ287932 NM_015283	716910	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	865050	-	AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)	0.553569	CTCF.p2:-17:0.554
chr19	42637337	42637465	reg1004511.p3	12.942	+	M36718 X13809 BT007438 AB590941 TSC_hg19_v1_chr19_-_42636564 BC006101 M36653 NM_001207025 NM_001207026 NM_001247994 NM_002698 X53468	-810	-	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	-57035	+	TSC_hg19_v1_chr19_+_42580286 NM_022752	-57119	+	TSC_hg19_v1_chr19_-_42721830 BC027930 NM_133328 AY125488 BC013372 AK307895 AK130203 AK075328	84438	-	TSC_hg19_v1_chr19_+_42724463 AK298895 AB075831 NM_133444	87063	+	AK122649 TSC_hg19_v1_chr19_+_42724498 BC013013	87100	+	M36718|POU2F2|5452|POU class 2 homeobox 2##X13809|POU2F2|5452|POU class 2 homeobox 2##BT007438|POU2F2|5452|POU class 2 homeobox 2##BC006101|POU2F2|5452|POU class 2 homeobox 2##M36653|POU2F2|5452|POU class 2 homeobox 2##NM_001207025|POU2F2|5452|POU class 2 homeobox 2##NM_001207026|POU2F2|5452|POU class 2 homeobox 2##NM_001247994|POU2F2|5452|POU class 2 homeobox 2##NM_002698|POU2F2|5452|POU class 2 homeobox 2##X53468|POU2F2|5452|POU class 2 homeobox 2##AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574##NM_022752|ZNF574|64763|zinc finger protein 574##BC027930|DEDD2|162989|death effector domain containing 2##NM_133328|DEDD2|162989|death effector domain containing 2##AY125488|DEDD2|162989|death effector domain containing 2##BC013372|DEDD2|162989|death effector domain containing 2##AK307895|DEDD2|162989|death effector domain containing 2##AK130203|DEDD2|162989|death effector domain containing 2##AK075328|DEDD2|162989|death effector domain containing 2##AK298895|ZNF526|116115|zinc finger protein 526##AB075831|ZNF526|116115|zinc finger protein 526##NM_133444|ZNF526|116115|zinc finger protein 526##AK122649|ZNF526|116115|zinc finger protein 526##BC013013|ZNF526|116115|zinc finger protein 526	1.024118	CTCF.p2:-2:0.996
chrX	103381201	103381363	reg1006650.p1	12.941	+	NM_001143978 TSC_hg19_v1_chrX_+_103357233	-24098	+	AK093522 AX748182 NM_001164416	-86767	+	AY283370 BC118604 BC121816 BC038109 NM_001002916	-113039	-	TSC_hg19_v1_chrX_-_103401691 AL833609 NM_001012755	20375	-	TSC_hg19_v1_chrX_+_103411133 AK091221 AX746858 BC057847 NM_207318	29842	+	TSC_hg19_v1_chrX_+_103411251 BC017665	29985	+	NM_001143978|ZCCHC18|644353|zinc finger, CCHC domain containing 18##AK093522|H2BFM|286436|H2B histone family, member M##NM_001164416|H2BFM|286436|H2B histone family, member M##AY283370|H2BFWT|158983|H2B histone family, member W, testis-specific##BC118604|H2BFWT|158983|H2B histone family, member W, testis-specific##BC121816|H2BFWT|158983|H2B histone family, member W, testis-specific##BC038109|H2BFWT|158983|H2B histone family, member W, testis-specific##NM_001002916|H2BFWT|158983|H2B histone family, member W, testis-specific##AL833609|MCART6|401612|mitochondrial carrier triple repeat 6##NM_001012755|MCART6|401612|mitochondrial carrier triple repeat 6##AK091221|FAM199X|139231|family with sequence similarity 199, X-linked##BC057847|FAM199X|139231|family with sequence similarity 199, X-linked##NM_207318|FAM199X|139231|family with sequence similarity 199, X-linked##BC017665|FAM199X|139231|family with sequence similarity 199, X-linked	0.999038	CTCF.p2:6:0.999
chr1	240061547	240061677	reg1006118.p1	12.939	+	AF279779 NM_000740	-269240	+	TSC_hg19_v1_chr1_+_239550016 AK056349	-511670	+	AK314151 NM_021186	-2007391	-	TSC_hg19_v1_chr1_+_240255182 NM_020066	193565	+	BC046632 TSC_hg19_v1_chr1_-_240775431	713797	-	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	713842	-	AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##NM_020066|FMN2|56776|formin 2##BC046632|GREM2|64388|gremlin 2##AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2	0.90811	CTCF.p2:16:0.879
chr17	72172956	72173061	reg1004095.p1	12.939	+	NM_001144952	-532782	-	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-864868	-	BC157870 NM_001129885	-914990	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	26807	+	TSC_hg19_v1_chr17_+_72199849 BC000603	26845	+	TSC_hg19_v1_chr17_+_72209709 NM_032646 BC107492 BC107602 AK315163 AF319952 BC005168	36661	+	NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38##NM_032646|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107492|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107602|TTYH2|94015|tweety homolog 2 (Drosophila)##AK315163|TTYH2|94015|tweety homolog 2 (Drosophila)##AF319952|TTYH2|94015|tweety homolog 2 (Drosophila)##BC005168|TTYH2|94015|tweety homolog 2 (Drosophila)	0.807034	CTCF.p2:13:0.807
chr12	50898625	50898739	reg1005151.p1	12.937	+	TSC_hg19_v1_chr12_+_50869532 AF131755	-29095	+	NM_001170803 NM_001170804 NM_001170808 NM_052879 NM_199188 NM_199190 TSC_hg19_v1_chr12_+_50794671 AL832198 CR936626 AL833272 BC022377 BC063479 AF370416 AK291746 AY004310 AK055521 BX647457 CU687740 EU831655 EU831738 EU831909 EU832003	-103990	+	BC054024 AL833333 NM_001145475	-108285	-	TSC_hg19_v1_chr12_+_50898767 AK091597 AX747083 NM_173602	73	+	TSC_hg19_v1_chr12_+_50898778 BC075027	217	+	TSC_hg19_v1_chr12_+_51157883 NM_005171 AK313406 BC029619	259196	+	AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_001170803|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_001170804|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_001170808|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_052879|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_199188|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_199190|LARP4|113251|La ribonucleoprotein domain family, member 4##AL832198|LARP4|113251|La ribonucleoprotein domain family, member 4##CR936626|LARP4|113251|La ribonucleoprotein domain family, member 4##AL833272|LARP4|113251|La ribonucleoprotein domain family, member 4##BC022377|LARP4|113251|La ribonucleoprotein domain family, member 4##BC063479|LARP4|113251|La ribonucleoprotein domain family, member 4##AF370416|LARP4|113251|La ribonucleoprotein domain family, member 4##AK291746|LARP4|113251|La ribonucleoprotein domain family, member 4##AY004310|LARP4|113251|La ribonucleoprotein domain family, member 4##AK055521|LARP4|113251|La ribonucleoprotein domain family, member 4##BX647457|LARP4|113251|La ribonucleoprotein domain family, member 4##EU831655|LARP4|113251|La ribonucleoprotein domain family, member 4##EU831738|LARP4|113251|La ribonucleoprotein domain family, member 4##EU831909|LARP4|113251|La ribonucleoprotein domain family, member 4##EU832003|LARP4|113251|La ribonucleoprotein domain family, member 4##BC054024|FAM186A|121006|family with sequence similarity 186, member A##AL833333|FAM186A|121006|family with sequence similarity 186, member A##NM_001145475|FAM186A|121006|family with sequence similarity 186, member A##AK091597|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##NM_173602|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##NM_005171|ATF1|466|activating transcription factor 1##AK313406|ATF1|466|activating transcription factor 1##BC029619|ATF1|466|activating transcription factor 1	0.996189	CTCF.p2:-3:0.996
chr4	170407401	170407546	reg1005089.p2	12.936	+	TSC_hg19_v1_chr4_-_170192202 NM_020870	-215253	-	AK021429 TSC_hg19_v1_chr4_-_170192108	-215366	-	TSC_hg19_v1_chr4_-_170192099 BC053671	-215426	-	BC015147 BC114491 AB067488 CR933642 AL050385 TSC_hg19_v1_chr4_-_170533735 BC068201 CR936672	126163	-	TSC_hg19_v1_chr4_-_170533762 NM_001199397 NM_001199398 NM_001199399 NM_001199400 NM_012224	126296	-	TSC_hg19_v1_chr4_+_170541683 NM_001243372 NM_001829 NM_173872	134198	+	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1##AK021429|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1##BC015147|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC114491|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AB067488|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR933642|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AL050385|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC068201|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR936672|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199397|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199398|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199399|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199400|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_012224|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001243372|CLCN3|1182|chloride channel 3##NM_001829|CLCN3|1182|chloride channel 3##NM_173872|CLCN3|1182|chloride channel 3	0.010145	
chr5	53525127	53525247	reg1004911.p1	12.936	+	TSC_hg19_v1_chr5_+_52856474 AF020351 AK307973 CU675075	-668701	+	TSC_hg19_v1_chr5_+_52856468 NM_002495 BC005270	-668723	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	-748637	+	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	81138	-	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	81215	-	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	226337	+	AF020351|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK307973|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##NM_002495|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##BC005270|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3	0.997587	CTCF.p2:7:0.998
chr3	114009833	114009956	reg1004334.p1	12.935	+	NM_007136 X65233	-53470	-	AY228457 AY228458 NM_000796 NM_033663 AY228454	-111978	-	TSC_hg19_v1_chr3_+_113775661 AK023022	-234220	+	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	2959	+	AF139460 NM_001164342	92594	-	BC029041 NM_001164347	333158	-	NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##AY228457|DRD3|1814|dopamine receptor D3##AY228458|DRD3|1814|dopamine receptor D3##NM_000796|DRD3|1814|dopamine receptor D3##NM_033663|DRD3|1814|dopamine receptor D3##AY228454|DRD3|1814|dopamine receptor D3##AK023022|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AF139460|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164342|ZBTB20|26137|zinc finger and BTB domain containing 20##BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20	0.979801	CTCF.p2:-18:0.980
chr3	130478708	130478837	reg1005540.p1	12.935	+	BC127105 BC127106 TSC_hg19_v1_chr3_-_130465651 AK314219 BC110318 BC009899 BC017332 BC057239 NM_014602	-13169	-	AM774225 NM_001102608	-199595	+	EU085556 NM_153264 AM906078	-414354	+	NM_001199180 NM_001199181 NM_001199182 AK296470	90634	+	TSC_hg19_v1_chr3_+_130612841 AB037768 NM_001199179 NM_001001485 NM_001199183 NM_001199184 AF189723 AF225981 AK304175 BC028139 NM_001199185 NM_014382 AF181120 AF181121 AK314342 NM_001001486 NM_001001487 AY268374 AY268375	134373	+	AK301388 BC069265 AK027806 NM_014065 AK294156	266868	-	BC127105|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC127106|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AK314219|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC110318|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC009899|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC017332|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC057239|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_014602|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AM774225|COL6A6|131873|collagen, type VI, alpha 6##NM_001102608|COL6A6|131873|collagen, type VI, alpha 6##EU085556|COL6A5|256076|collagen, type VI, alpha 5##NM_153264|COL6A5|256076|collagen, type VI, alpha 5##AM906078|COL6A5|256076|collagen, type VI, alpha 5##NM_001199180|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199181|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199182|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK296470|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AB037768|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199179|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001485|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199183|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199184|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF189723|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF225981|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK304175|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##BC028139|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199185|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_014382|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181120|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181121|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK314342|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001486|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001487|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268374|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268375|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK301388|ASTE1|28990|asteroid homolog 1 (Drosophila)##BC069265|ASTE1|28990|asteroid homolog 1 (Drosophila)##AK027806|ASTE1|28990|asteroid homolog 1 (Drosophila)##NM_014065|ASTE1|28990|asteroid homolog 1 (Drosophila)##AK294156|ASTE1|28990|asteroid homolog 1 (Drosophila)	0.996217	CTCF.p2:-14:0.996
chr3	195749062	195749184	reg1002905.p1	12.935	+	TSC_hg19_v1_chr3_-_195717156 BC071730 AK300421 AK316025 AK299148	-31992	-	NM_005781 L13738	-113207	-	AK131539 NM_001010938	-126692	-	TSC_hg19_v1_chr3_-_195808954 AB209254 X01060 BC001188	59821	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	59838	-	TSC_hg19_v1_chr3_-_195808984 M11507	59860	-	BC071730|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AK316025|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK299148|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##NM_005781|TNK2|10188|tyrosine kinase, non-receptor, 2##L13738|TNK2|10188|tyrosine kinase, non-receptor, 2##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2##AB209254|TFRC|7037|transferrin receptor (p90, CD71)##X01060|TFRC|7037|transferrin receptor (p90, CD71)##BC001188|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)	0.788606	CTCF.p2:-16:0.789
chr14	103651811	103651967	reg1006528.p1	12.934	+	M92357 NM_006291 BC128449 BC128450 TSC_hg19_v1_chr14_+_103592873	-59121	+	TSC_hg19_v1_chr14_+_103589771 BC017818	-62144	+	BC113655 BC117375 NM_001077594 HQ258590	-85371	+	NM_001969 TSC_hg19_v1_chr14_+_103800527	148621	+	TSC_hg19_v1_chr14_+_103800534 AL080102 AK026933	148651	+	TSC_hg19_v1_chr14_+_103800573 BC107884	148721	+	M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC017818|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC113655|EXOC3L4|91828|exocyst complex component 3-like 4##BC117375|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001077594|EXOC3L4|91828|exocyst complex component 3-like 4##HQ258590|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001969|EIF5|1983|eukaryotic translation initiation factor 5##AL080102|EIF5|1983|eukaryotic translation initiation factor 5##AK026933|EIF5|1983|eukaryotic translation initiation factor 5##BC107884|EIF5|1983|eukaryotic translation initiation factor 5	0.0	
chr14	105994809	105994907	reg1004593.p2	12.932	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-1917	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-37222	+	BX248038 NM_001134877	-38339	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	97478	-	BC040042 TSC_hg19_v1_chr14_-_106110945	116065	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	116258	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.995919	CTCF.p2:19:0.996
chr4	17349199	17349330	reg1006911.p1	12.932	+	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	-448879	-	AK226029 TSC_hg19_v1_chr4_-_16900258	-449005	-	AK300119 AB463834 DQ891981 DQ895171 AK312881 TSC_hg19_v1_chr4_-_16900210 AF068651 AF047337 AF064492 AF064493 BC034019	-449138	-	AB528218 AM393718 DQ891926 DQ895113 CU674280 TSC_hg19_v1_chr4_-_17513714 X04882 BC000576 AK124382 AK296622 AK223437 AK289773 NM_000320	164502	-	BC127863 NM_001079827	167523	+	TSC_hg19_v1_chr4_+_17578852 NM_015907	229618	+	AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2##AK226029|LDB2|9079|LIM domain binding 2##AK300119|LDB2|9079|LIM domain binding 2##DQ891981|LDB2|9079|LIM domain binding 2##DQ895171|LDB2|9079|LIM domain binding 2##AK312881|LDB2|9079|LIM domain binding 2##AF068651|LDB2|9079|LIM domain binding 2##AF047337|LDB2|9079|LIM domain binding 2##AF064492|LDB2|9079|LIM domain binding 2##AF064493|LDB2|9079|LIM domain binding 2##BC034019|LDB2|9079|LIM domain binding 2##AM393718|QDPR|5860|quinoid dihydropteridine reductase##DQ891926|QDPR|5860|quinoid dihydropteridine reductase##DQ895113|QDPR|5860|quinoid dihydropteridine reductase##X04882|QDPR|5860|quinoid dihydropteridine reductase##BC000576|QDPR|5860|quinoid dihydropteridine reductase##AK124382|QDPR|5860|quinoid dihydropteridine reductase##AK296622|QDPR|5860|quinoid dihydropteridine reductase##AK223437|QDPR|5860|quinoid dihydropteridine reductase##AK289773|QDPR|5860|quinoid dihydropteridine reductase##NM_000320|QDPR|5860|quinoid dihydropteridine reductase##BC127863|CLRN2|645104|clarin 2##NM_001079827|CLRN2|645104|clarin 2##NM_015907|LAP3|51056|leucine aminopeptidase 3	0.850909	CTCF.p2:-1:0.851
chr3	45698373	45698498	reg1004795.p1	12.931	+	TSC_hg19_v1_chr3_+_45636176 BC117236 BC117238 NM_014240 AJ132408 HQ258355	-62164	+	TSC_hg19_v1_chr3_+_45635397 M80651	-62850	+	AK308146 BC025989 TSC_hg19_v1_chr3_+_45430067 D21851 NM_015340	-268371	+	CR749564 TSC_hg19_v1_chr3_+_45730767 NM_014016	32298	+	TSC_hg19_v1_chr3_+_45730846 AK291142	32422	+	TSC_hg19_v1_chr3_+_45730887 AB020658 AK301248	32454	+	BC117236|LIMD1|8994|LIM domains containing 1##BC117238|LIMD1|8994|LIM domains containing 1##NM_014240|LIMD1|8994|LIM domains containing 1##AJ132408|LIMD1|8994|LIM domains containing 1##HQ258355|LIMD1|8994|LIM domains containing 1##M80651|LIMD1|8994|LIM domains containing 1##AK308146|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##BC025989|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##D21851|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015340|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##CR749564|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##NM_014016|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK291142|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AB020658|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK301248|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	0.994489	CTCF.p2:18:0.994
chr6	7243809	7243949	reg1005744.p2	12.931	+	BX647723 TSC_hg19_v1_chr6_+_7108910	-134976	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	-135656	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	-135844	+	BT007387 CR456961 AB464204 DQ892751 EU176743 TSC_hg19_v1_chr6_-_7313433 Z12830 AK075562 AK222762 AK222809 AK291550 AK312653 CR936719 BC007710 NM_003144	69567	-	AF414185 NM_001170692 NM_001170693 NM_205864 TSC_hg19_v1_chr6_-_7389974	146088	-	TSC_hg19_v1_chr6_+_7390042 AY094356 AK314467 BC006104 NM_031480 AK054568	146219	+	BX647723|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##BT007387|SSR1|6745|signal sequence receptor, alpha##CR456961|SSR1|6745|signal sequence receptor, alpha##DQ892751|SSR1|6745|signal sequence receptor, alpha##EU176743|SSR1|6745|signal sequence receptor, alpha##Z12830|SSR1|6745|signal sequence receptor, alpha##AK075562|SSR1|6745|signal sequence receptor, alpha##AK222762|SSR1|6745|signal sequence receptor, alpha##AK222809|SSR1|6745|signal sequence receptor, alpha##AK291550|SSR1|6745|signal sequence receptor, alpha##AK312653|SSR1|6745|signal sequence receptor, alpha##CR936719|SSR1|6745|signal sequence receptor, alpha##BC007710|SSR1|6745|signal sequence receptor, alpha##NM_003144|SSR1|6745|signal sequence receptor, alpha##AF414185|CAGE1|285782|cancer antigen 1##NM_001170692|CAGE1|285782|cancer antigen 1##NM_001170693|CAGE1|285782|cancer antigen 1##NM_205864|CAGE1|285782|cancer antigen 1##AY094356|RIOK1|83732|RIO kinase 1 (yeast)##AK314467|RIOK1|83732|RIO kinase 1 (yeast)##BC006104|RIOK1|83732|RIO kinase 1 (yeast)##NM_031480|RIOK1|83732|RIO kinase 1 (yeast)##AK054568|RIOK1|83732|RIO kinase 1 (yeast)	0.014465	
chr12	48559014	48559143	reg1004493.p2	12.930	+	TSC_hg19_v1_chr12_-_48551274 AF464877 AK024908 BC001321 AK297013 AK289957 NM_024095	-7756	-	D21861 NM_001166687 NM_001166688 Y00698 BC000534 BC012799 BC013298 AB463168 CU674264 CU676868 BC007798	-42583	+	NM_000289 D21862 TSC_hg19_v1_chr12_+_48513146 M26066 U24183 AK312284 BC021203	-45992	+	NM_001013635 AK056003 BC036801 TSC_hg19_v1_chr12_+_48577419 BC049387	18327	+	TSC_hg19_v1_chr12_+_48592139 AK125945 CR749551	33076	+	AB587540 NM_001004134 BC136757 BC136758	38043	-	AF464877|ASB8|140461|ankyrin repeat and SOCS box containing 8##AK024908|ASB8|140461|ankyrin repeat and SOCS box containing 8##BC001321|ASB8|140461|ankyrin repeat and SOCS box containing 8##AK297013|ASB8|140461|ankyrin repeat and SOCS box containing 8##AK289957|ASB8|140461|ankyrin repeat and SOCS box containing 8##NM_024095|ASB8|140461|ankyrin repeat and SOCS box containing 8##D21861|PFKM|5213|phosphofructokinase, muscle##NM_001166687|PFKM|5213|phosphofructokinase, muscle##NM_001166688|PFKM|5213|phosphofructokinase, muscle##Y00698|PFKM|5213|phosphofructokinase, muscle##BC000534|PFKM|5213|phosphofructokinase, muscle##BC012799|PFKM|5213|phosphofructokinase, muscle##BC013298|PFKM|5213|phosphofructokinase, muscle##BC007798|PFKM|5213|phosphofructokinase, muscle##NM_000289|PFKM|5213|phosphofructokinase, muscle##M26066|PFKM|5213|phosphofructokinase, muscle##U24183|PFKM|5213|phosphofructokinase, muscle##AK312284|PFKM|5213|phosphofructokinase, muscle##BC021203|PFKM|5213|phosphofructokinase, muscle##NM_001013635|C12orf68|387856|chromosome 12 open reading frame 68##AK056003|C12orf68|387856|chromosome 12 open reading frame 68##BC036801|C12orf68|387856|chromosome 12 open reading frame 68##BC049387|C12orf68|387856|chromosome 12 open reading frame 68##AK125945|DKFZP779L1853|643162|uncharacterized LOC643162##CR749551|DKFZP779L1853|643162|uncharacterized LOC643162##NM_001004134|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1##BC136757|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1##BC136758|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1	0.790727	CTCF.p2:3:0.791
chr6	144334676	144334798	reg1004659.p2	12.930	+	TSC_hg19_v1_chr6_-_144329394 AK314570 BC059359 AK096331 NM_001080952 NM_001080953 NM_001080954 NM_001080956 NM_002656 NM_006718 AJ311395 U72621	-5273	-	EF100446 EF100447 EF100448 EF100449 EF100450 EF100451 EF100452 TSC_hg19_v1_chr6_-_144329322	-5449	-	BC146950 BC146969 BC171862 NM_001013623	-149165	+	EF100438 EF100439 EF100440 EF100441 EF100442 EF100443 EF100444 EF100445 TSC_hg19_v1_chr6_-_144385724 NM_001080951 NM_001080955	50953	-	AB528231 AM393071 BC000198 TSC_hg19_v1_chr6_-_144416703 AK312079 AK074417	81934	-	NM_031287 TSC_hg19_v1_chr6_-_144416757	82025	-	AK314570|PLAGL1|5325|pleiomorphic adenoma gene-like 1##BC059359|HYMAI|57061|hydatidiform mole associated and imprinted (non-protein coding)##AK096331|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080952|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080953|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080954|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080956|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_002656|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_006718|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AJ311395|PLAGL1|5325|pleiomorphic adenoma gene-like 1##U72621|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100446|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100447|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100448|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100449|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100450|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100451|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100452|PLAGL1|5325|pleiomorphic adenoma gene-like 1##BC146950|C6orf94|153918|chromosome 6 open reading frame 94##BC146969|C6orf94|153918|chromosome 6 open reading frame 94##BC171862|C6orf94|153918|chromosome 6 open reading frame 94##NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94##EF100438|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100439|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100440|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100441|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100442|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100443|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100444|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100445|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080951|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080955|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AM393071|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##BC000198|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK312079|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK074417|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##NM_031287|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa	0.969202	CTCF.p2:2:0.969
chr3	108800983	108801103	reg1003891.p2	12.929	+	AF110003 EU832759 GQ129299 AF110002 BC103993 BC103994 AB593147 NM_005459	-128432	-	AK291991 AJ240085 AF161547 NM_016388 BC025713 AJ224878	-259449	+	HQ258043 AM050721 BC113502 BC113528 BC069318 AF290873 AF323084 AY358655 NM_032579 TSC_hg19_v1_chr3_-_108476258	-324898	-	CU690636 BC050307 AK302642 AF084946 BC028680 NM_014429	35907	-	AK026416 TSC_hg19_v1_chr3_+_108855566	54520	+	BC018070 AY283672 NM_138815	234258	-	AF110003|GUCA1C|9626|guanylate cyclase activator 1C##EU832759|GUCA1C|9626|guanylate cyclase activator 1C##GQ129299|GUCA1C|9626|guanylate cyclase activator 1C##AF110002|GUCA1C|9626|guanylate cyclase activator 1C##BC103993|GUCA1C|9626|guanylate cyclase activator 1C##BC103994|GUCA1C|9626|guanylate cyclase activator 1C##AB593147|GUCA1C|9626|guanylate cyclase activator 1C##NM_005459|GUCA1C|9626|guanylate cyclase activator 1C##AK291991|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ240085|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AF161547|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##NM_016388|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##BC025713|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ224878|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##HQ258043|RETNLB|84666|resistin like beta##AM050721|RETNLB|84666|resistin like beta##BC113502|RETNLB|84666|resistin like beta##BC113528|RETNLB|84666|resistin like beta##BC069318|RETNLB|84666|resistin like beta##AF290873|RETNLB|84666|resistin like beta##AF323084|RETNLB|84666|resistin like beta##AY358655|RETNLB|84666|resistin like beta##NM_032579|RETNLB|84666|resistin like beta##BC050307|MORC1|27136|MORC family CW-type zinc finger 1##AK302642|MORC1|27136|MORC family CW-type zinc finger 1##AF084946|MORC1|27136|MORC family CW-type zinc finger 1##BC028680|MORC1|27136|MORC family CW-type zinc finger 1##NM_014429|MORC1|27136|MORC family CW-type zinc finger 1##AK026416|FLJ22763|401081|uncharacterized LOC401081##BC018070|DPPA2|151871|developmental pluripotency associated 2##AY283672|DPPA2|151871|developmental pluripotency associated 2##NM_138815|DPPA2|151871|developmental pluripotency associated 2	0.591229	CTCF.p2:15:0.591
chr4	26030482	26030601	reg1006082.p1	12.929	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-114677	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-165987	-	NM_001177999 AK314514	-372451	+	L07875 BC020780 NM_005349 NM_203283	290778	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	291768	+	TSC_hg19_v1_chr4_+_26322635 AK302230	292095	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.952941	CTCF.p2:0:0.953
chr2	88301436	88301578	reg1006403.p1	12.928	+	CR749330 NM_001024457	-16199	-	AK302429 NM_001078170	-176222	-	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	-253888	+	AF208845 AF217520 NM_016618 TSC_hg19_v1_chr2_-_88355252 BC015927	53752	-	BC107580 TSC_hg19_v1_chr2_-_88355283	53779	-	BC126191 NM_198274 AK091724 AX747145 BC017915 BX647878 AL832035 AB527846 EU831908 EU832002 HQ258264 AY518933	65842	+	CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##AK302429|RGPD2|729857|RANBP2-like and GRIP domain containing 2##NM_001078170|RGPD2|729857|RANBP2-like and GRIP domain containing 2##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1##AF208845|KRCC1|51315|lysine-rich coiled-coil 1##AF217520|KRCC1|51315|lysine-rich coiled-coil 1##NM_016618|KRCC1|51315|lysine-rich coiled-coil 1##BC015927|KRCC1|51315|lysine-rich coiled-coil 1##BC107580|KRCC1|51315|lysine-rich coiled-coil 1##BC126191|SMYD1|150572|SET and MYND domain containing 1##NM_198274|SMYD1|150572|SET and MYND domain containing 1##AK091724|SMYD1|150572|SET and MYND domain containing 1##BC017915|SMYD1|150572|SET and MYND domain containing 1##BX647878|SMYD1|150572|SET and MYND domain containing 1##AL832035|SMYD1|150572|SET and MYND domain containing 1##EU831908|SMYD1|150572|SET and MYND domain containing 1##EU832002|SMYD1|150572|SET and MYND domain containing 1##HQ258264|SMYD1|150572|SET and MYND domain containing 1##AY518933|SMYD1|150572|SET and MYND domain containing 1	0.999375	CTCF.p2:18:0.999
chr10	104111985	104112104	reg1006326.p1	12.927	+	TSC_hg19_v1_chr10_+_104005308 AF068755 D87435 BC117681 BC117682	-106677	+	NM_001199378 NM_001199379 NM_004193 BC057804 BC068543 TSC_hg19_v1_chr10_+_104005288 BC094763 AK025330 BC032543	-106765	+	BC011642 NM_005029	-110815	-	NM_001077493 TSC_hg19_v1_chr10_+_104154290 BC002844 NM_001077494 S76638	42246	+	NM_002502 X61498 X61499 TSC_hg19_v1_chr10_+_104155501 AK292654	43427	+	TSC_hg19_v1_chr10_-_104178575 BC037332	66528	-	AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199378|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199379|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC011642|PITX3|5309|paired-like homeodomain 3##NM_005029|PITX3|5309|paired-like homeodomain 3##NM_001077493|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC002844|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_001077494|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##S76638|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_002502|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61498|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61499|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##AK292654|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC037332|PSD|5662|pleckstrin and Sec7 domain containing	0.998056	CTCF.p2:4:0.998
chr17	1235960	1236085	reg1004509.p2	12.927	+	AB090231 NM_172367 BC142615	-53058	+	NM_001164405	-62165	+	TSC_hg19_v1_chr17_-_1090565 AK126882 AK124547 NM_001159746	-145434	-	TSC_hg19_v1_chr17_-_1248347 L13388	12334	-	TSC_hg19_v1_chr17_-_1303504 BT007161 CU674076 EU176525 U28936 AB590347 BC000179 AX775995 U43399 U43430 U54778 U20972 BC001440 AY883089 AK295260 AK295997 AK296050 AK296555 AK128785 AK316185 AK316201	67447	-	TSC_hg19_v1_chr17_-_1303556 NM_006761	67531	-	AB090231|TUSC5|286753|tumor suppressor candidate 5##NM_172367|TUSC5|286753|tumor suppressor candidate 5##BC142615|TUSC5|286753|tumor suppressor candidate 5##NM_001164405|BHLHA9|727857|basic helix-loop-helix family, member a9##AK126882|ABR|29|active BCR-related gene##AK124547|ABR|29|active BCR-related gene##NM_001159746|ABR|29|active BCR-related gene##L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BT007161|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##EU176525|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U28936|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC000179|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43399|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43430|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U54778|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U20972|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC001440|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AY883089|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295260|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295997|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296050|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296555|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK128785|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316185|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316201|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##NM_006761|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	0.996031	CTCF.p2:1:0.996
chr3	189919716	189919856	reg1006330.p1	12.926	+	NM_001134418	-79561	-	NM_018192	-80879	-	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	-81091	-	BC012471 AF114837 AY358652 AF101051 AF134160 AK312866 AK225963 AK296934 TSC_hg19_v1_chr3_-_190040231 NM_021101	120428	-	AK314955 NM_006580	185874	+	CU687168 BC071780 AY358607 NM_207316	247844	-	NM_001134418|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##BC012471|CLDN1|9076|claudin 1##AF114837|CLDN1|9076|claudin 1##AY358652|CLDN1|9076|claudin 1##AF101051|CLDN1|9076|claudin 1##AF134160|CLDN1|9076|claudin 1##AK312866|CLDN1|9076|claudin 1##AK296934|CLDN1|9076|claudin 1##NM_021101|CLDN1|9076|claudin 1##AK314955|CLDN16|10686|claudin 16##NM_006580|CLDN16|10686|claudin 16##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207	0.984962	CTCF.p2:-5:0.985
chr3	32975770	32975875	reg1003475.p1	12.926	+	DQ232881 NM_001039111	-116313	+	TSC_hg19_v1_chr3_+_32726700 AK023227 AK022952 NM_015442 AK309670 BC006382 BC002931 BC002928 AK297085 AK298693 CU678296 CU678298 DQ892895 DQ896143 EU831494 EU831581	-249017	+	BX649189 TSC_hg19_v1_chr3_-_32612288 AK222573 AK222653 BC131620 AF078849 AK074348 AK293253 NM_016141	-363548	-	BC071751 NM_005508 AK292674	17278	+	TSC_hg19_v1_chr3_-_33138279 AK300021 AK126979 AK128242 NM_001039770 NM_001136238	162448	-	NM_001079811 TSC_hg19_v1_chr3_-_33138315	162511	-	DQ232881|TRIM71|131405|tripartite motif containing 71##NM_001039111|TRIM71|131405|tripartite motif containing 71##AK023227|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK022952|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##NM_015442|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK309670|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC006382|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002931|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002928|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK297085|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK298693|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ892895|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ896143|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831494|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831581|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC071751|CCR4|1233|chemokine (C-C motif) receptor 4##NM_005508|CCR4|1233|chemokine (C-C motif) receptor 4##AK292674|CCR4|1233|chemokine (C-C motif) receptor 4##AK300021|GLB1|2720|galactosidase, beta 1##AK126979|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##AK128242|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001039770|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001136238|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001079811|GLB1|2720|galactosidase, beta 1	0.999741	CTCF.p2:6:1.000
chr16	68074567	68074704	reg1006381.p1	12.925	+	NM_018380	-16866	-	AK290578 TSC_hg19_v1_chr16_+_68057186 AB101210 AK296663 AK000406 BC006527 NM_017803	-17460	+	TSC_hg19_v1_chr16_-_68057129 BC014517	-17507	-	TSC_hg19_v1_chr16_+_68119279 NM_004555 NM_173163 NM_173165	44619	+	TSC_hg19_v1_chr16_+_68119335 AB209824	44703	+	TSC_hg19_v1_chr16_+_68119350 L41067	44734	+	NM_018380|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##AK290578|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AB101210|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK296663|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK000406|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC006527|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##NM_017803|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC014517|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##NM_004555|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173163|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173165|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##AB209824|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##L41067|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	0.997484	CTCF.p2:24:0.997
chr5	87077085	87077214	reg1005041.p1	12.925	+	TSC_hg19_v1_chr5_-_86708756 NM_001239	-368347	-	CU675079 CU677687 CU692576 AB590163 CR407658 DQ892550 DQ895761 U12685 TSC_hg19_v1_chr5_-_86708717 U11791 BC022351 BC016823 BC016705 AK291720 BC005280 BX537673 NM_001199189	-368484	-	TSC_hg19_v1_chr5_-_86703928 AK094534	-373188	-	BX647345 AK299896 AK300893 AK301091 AY358693 BC037287 NM_153354 AK294520	487495	-	TSC_hg19_v1_chr5_+_87564773 BC030122	487607	+	BC047059 TSC_hg19_v1_chr5_+_87564842	487700	+	NM_001239|CCNH|902|cyclin H##CR407658|CCNH|902|cyclin H##DQ892550|CCNH|902|cyclin H##DQ895761|CCNH|902|cyclin H##U12685|CCNH|902|cyclin H##U11791|CCNH|902|cyclin H##BC022351|CCNH|902|cyclin H##BC016823|CCNH|902|cyclin H##BC016705|CCNH|902|cyclin H##AK291720|CCNH|902|cyclin H##BC005280|CCNH|902|cyclin H##BX537673|CCNH|902|cyclin H##NM_001199189|CCNH|902|cyclin H##AK094534|CCNH|902|cyclin H##BX647345|TMEM161B|153396|transmembrane protein 161B##AK299896|TMEM161B|153396|transmembrane protein 161B##AK300893|TMEM161B|153396|transmembrane protein 161B##AK301091|TMEM161B|153396|transmembrane protein 161B##AY358693|TMEM161B|153396|transmembrane protein 161B##BC037287|TMEM161B|153396|transmembrane protein 161B##NM_153354|TMEM161B|153396|transmembrane protein 161B##BC030122|LOC100505894|100505894|uncharacterized LOC100505894##BC047059|LOC100505894|100505894|uncharacterized LOC100505894	0.260204	CTCF.p2:-13:0.260
chr9	86788136	86788276	reg1007306.p1	12.925	+	NM_024945 TSC_hg19_v1_chr9_+_86595689 BC039999 BC020606 AK022950 BC044571 BC053549 BC032494	-192497	+	TSC_hg19_v1_chr9_-_86595531 BC014980 AK291336 X72727 NM_002140 NM_031262	-192667	-	TSC_hg19_v1_chr9_-_86595168 NM_031263	-193031	-	BC093821 BC093823 AK310861 AK304406 AK314039 AK292849 NM_001199633	167428	-	AF305210 NM_022127	195206	-	TSC_hg19_v1_chr9_+_87283453 BC075804 NM_001018064 NM_006180 AB209118	495255	+	NM_024945|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC039999|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC020606|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##AK022950|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC044571|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC053549|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC032494|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC014980|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##AK291336|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##X72727|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_002140|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_031262|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_031263|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##BC093821|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093823|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK310861|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK304406|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK314039|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK292849|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_001199633|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AF305210|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_022127|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC075804|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018064|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_006180|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB209118|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	0.236726	CTCF.p2:-6:0.237
chr14	91752911	91753029	reg1004764.p1	12.924	+	BC098567 NM_003485	-32776	-	BC128536 NM_001177676	-42119	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-171943	+	TSC_hg19_v1_chr14_-_91884159 AF070587	131178	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	131205	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	223530	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.998971	CTCF.p2:7:0.999
chr5	176881519	176881641	reg1005262.p2	12.924	+	NM_001174102 BC021240	-6251	+	BC024233 NM_001174101 NM_030567 TSC_hg19_v1_chr5_+_176873814 BC004261	-7761	+	TSC_hg19_v1_chr5_+_176853676 NM_001004105 NM_001004106 NM_002082 BC009277 L16862 BC017272 AF040751 AF040752 CU677893 CU679285 AB527614	-27822	+	NM_080881	18290	-	TSC_hg19_v1_chr5_-_176900626 U00802 D17530 BC000283 BC007281 BC007567 AK094125 AK225523 AK314645	19040	-	TSC_hg19_v1_chr5_-_176900653 NM_004395	19093	-	NM_001174102|PRR7|80758|proline rich 7 (synaptic)##BC021240|PRR7|80758|proline rich 7 (synaptic)##BC024233|PRR7|80758|proline rich 7 (synaptic)##NM_001174101|PRR7|80758|proline rich 7 (synaptic)##NM_030567|PRR7|80758|proline rich 7 (synaptic)##BC004261|PRR7|80758|proline rich 7 (synaptic)##NM_001004105|GRK6|2870|G protein-coupled receptor kinase 6##NM_001004106|GRK6|2870|G protein-coupled receptor kinase 6##NM_002082|GRK6|2870|G protein-coupled receptor kinase 6##BC009277|GRK6|2870|G protein-coupled receptor kinase 6##L16862|GRK6|2870|G protein-coupled receptor kinase 6##BC017272|GRK6|2870|G protein-coupled receptor kinase 6##AF040751|GRK6|2870|G protein-coupled receptor kinase 6##AF040752|GRK6|2870|G protein-coupled receptor kinase 6##NM_080881|DBN1|1627|drebrin 1##U00802|DBN1|1627|drebrin 1##D17530|DBN1|1627|drebrin 1##BC000283|DBN1|1627|drebrin 1##BC007281|DBN1|1627|drebrin 1##BC007567|DBN1|1627|drebrin 1##AK094125|DBN1|1627|drebrin 1##AK225523|DBN1|1627|drebrin 1##AK314645|DBN1|1627|drebrin 1##NM_004395|DBN1|1627|drebrin 1	0.995268	CTCF.p2:1:0.995
chr12	8449599	8449718	reg1005758.p1	12.922	+	BC042608 AK001270 NM_018088	-69455	-	TSC_hg19_v1_chr12_+_8332811 AK096301 BC048994 AK311411 BC034777	-116832	+	NM_001004328	-124509	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	158944	+	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	216573	+	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	243816	-	BC042608|FAM90A1|55138|family with sequence similarity 90, member A1##AK001270|FAM90A1|55138|family with sequence similarity 90, member A1##NM_018088|FAM90A1|55138|family with sequence similarity 90, member A1##AK096301|FAM66C|440078|family with sequence similarity 66, member C##BC048994|FAM66C|440078|family with sequence similarity 66, member C##BC034777|FAM66C|440078|family with sequence similarity 66, member C##NM_001004328|ZNF705A|440077|zinc finger protein 705A##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E	0.991264	CTCF.p2:-2:0.991
chr1	90228616	90228746	reg1004315.p1	12.922	+	TSC_hg19_v1_chr1_+_90098707 AK127881 AB081509 BC103929 BC113973	-129917	+	NM_032270 TSC_hg19_v1_chr1_+_90098643	-130036	+	TSC_hg19_v1_chr1_+_90098630 BC036122	-130048	+	TSC_hg19_v1_chr1_+_90286586 NM_001134479	57846	+	TSC_hg19_v1_chr1_+_90286603 AK092238 AX747423	57918	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	58777	+	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C##AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_001134479|LRRC8D|55144|leucine rich repeat containing 8 family, member D##AK092238|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D	0.939992	CTCF.p2:18:0.940
chr5	95178931	95179056	reg1004761.p2	12.921	+	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	-20473	-	AF162769 BT006689 CR450312 CR542165 DQ892497 DQ895709 CU679866 D21238 AF069668 BC106075 X76648 TSC_hg19_v1_chr5_-_95158431 AK311868 BC005304 BC010965	-20593	-	TSC_hg19_v1_chr5_+_95067531 CU691986 AB385392	-111457	+	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	118505	-	TSC_hg19_v1_chr5_-_95297609 BC028412 NM_012081	118692	-	AK308575 NM_001177876	569695	-	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##AF162769|GLRX|2745|glutaredoxin (thioltransferase)##BT006689|GLRX|2745|glutaredoxin (thioltransferase)##CR450312|GLRX|2745|glutaredoxin (thioltransferase)##CR542165|GLRX|2745|glutaredoxin (thioltransferase)##DQ892497|GLRX|2745|glutaredoxin (thioltransferase)##DQ895709|GLRX|2745|glutaredoxin (thioltransferase)##D21238|GLRX|2745|glutaredoxin (thioltransferase)##AF069668|GLRX|2745|glutaredoxin (thioltransferase)##BC106075|GLRX|2745|glutaredoxin (thioltransferase)##X76648|GLRX|2745|glutaredoxin (thioltransferase)##AK311868|GLRX|2745|glutaredoxin (thioltransferase)##BC005304|GLRX|2745|glutaredoxin (thioltransferase)##BC010965|GLRX|2745|glutaredoxin (thioltransferase)##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2##BC028412|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_012081|ELL2|22936|elongation factor, RNA polymerase II, 2##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1	0.077612	
chr6	47702011	47702150	reg1006116.p1	12.920	+	AK095395 NM_153838 DQ315370	-35786	+	AY140953 DQ315369 NM_153839	-77807	+	TSC_hg19_v1_chr6_+_47445937 AF146277 BC069444	-256164	+	BC126194 BC126198 NM_181744 AY377391 AY288419 HQ258199	47708	+	BC136779 AK123835 AK299301 NM_001013732 NM_207499	334324	-	TSC_hg19_v1_chr6_-_48078931 AK300335	376845	-	AK095395|GPR115|221393|G protein-coupled receptor 115##NM_153838|GPR115|221393|G protein-coupled receptor 115##DQ315370|GPR115|221393|G protein-coupled receptor 115##AY140953|GPR111|222611|G protein-coupled receptor 111##DQ315369|GPR111|222611|G protein-coupled receptor 111##NM_153839|GPR111|222611|G protein-coupled receptor 111##AF146277|CD2AP|23607|CD2-associated protein##BC069444|CD2AP|23607|CD2-associated protein##BC126194|OPN5|221391|opsin 5##BC126198|OPN5|221391|opsin 5##NM_181744|OPN5|221391|opsin 5##AY377391|OPN5|221391|opsin 5##AY288419|OPN5|221391|opsin 5##HQ258199|OPN5|221391|opsin 5##BC136779|C6orf138|442213|chromosome 6 open reading frame 138##AK123835|C6orf138|442213|chromosome 6 open reading frame 138##AK299301|C6orf138|442213|chromosome 6 open reading frame 138##NM_001013732|C6orf138|442213|chromosome 6 open reading frame 138##NM_207499|C6orf138|442213|chromosome 6 open reading frame 138##AK300335|C6orf138|442213|chromosome 6 open reading frame 138	0.904679	CTCF.p2:9:0.905
chr15	23482322	23482418	reg1003731.p1	12.919	+	TSC_hg19_v1_chr15_-_23378229 AF041081 AF041080	-104126	-	TSC_hg19_v1_chr15_-_23378205 AK308640	-104180	-	DQ309040 BC048987 TSC_hg19_v1_chr15_-_23208467	-273959	-	NM_005664	328083	+	AK309383 TSC_hg19_v1_chr15_+_23810820 BC044639 BC013970 BC070293 EU446987 CU692226	328498	+	NM_019066 TSC_hg19_v1_chr15_-_23893004	410634	-	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041080|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AK308640|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##DQ309040|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC048987|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##NM_005664|MKRN3|7681|makorin ring finger protein 3##BC044639|MKRN3|7681|makorin ring finger protein 3##BC070293|MKRN3|7681|makorin ring finger protein 3##EU446987|MKRN3|7681|makorin ring finger protein 3##NM_019066|MAGEL2|54551|MAGE-like 2	0.998843	CTCF.p2:23:0.999
chr3	58285941	58286085	reg1004178.p2	12.919	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	-62483	+	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	-62730	+	NM_004944	-85616	-	TSC_hg19_v1_chr3_+_58291985 NM_001098783 NM_007042	5957	+	TSC_hg19_v1_chr3_+_58292000 AF001175	5987	+	TSC_hg19_v1_chr3_+_58292022 BC012017 BC002441 BC007342	6004	+	AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_001098783|RPP14|11102|ribonuclease P/MRP 14kDa subunit##NM_007042|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AF001175|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC012017|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC002441|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC007342|RPP14|11102|ribonuclease P/MRP 14kDa subunit	0.225633	CTCF.p2:20:0.226
chr4	117279873	117280015	reg1006727.p1	12.919	+	BC113075 BC012326 AK289670 AB036429 NM_022569	-1244963	-	NM_003360 U30930	-1736422	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-1760361	+	AK074617 BC030831 NM_152402	726789	-	TSC_hg19_v1_chr4_+_118954764 AY358852	1674827	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	1675631	+	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.975707	CTCF.p2:-3:0.976
chr1	205601181	205601310	reg1005775.p1	12.918	+	BC063676 M85164 M85165 TSC_hg19_v1_chr1_-_205601025 BC040145	-339	-	BC036549 AK091896 AX747240 TSC_hg19_v1_chr1_+_205538184 AK304120 AK090831 AX746641 AK295148	-63032	+	AK293816 NM_181644 TSC_hg19_v1_chr1_+_205538141	-63118	+	NM_001973 NM_021795	754	-	BC050416 AY033593 TSC_hg19_v1_chr1_-_205649588	48323	-	AK313479 TSC_hg19_v1_chr1_-_205649636 AK290364 FJ805258 FJ805259 FJ805260 FJ805261 NM_033102 EF632109	48436	-	BC063676|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85164|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85165|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC040145|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC036549|MFSD4|148808|major facilitator superfamily domain containing 4##AK091896|MFSD4|148808|major facilitator superfamily domain containing 4##AK304120|MFSD4|148808|major facilitator superfamily domain containing 4##AK090831|MFSD4|148808|major facilitator superfamily domain containing 4##AK295148|MFSD4|148808|major facilitator superfamily domain containing 4##AK293816|MFSD4|148808|major facilitator superfamily domain containing 4##NM_181644|MFSD4|148808|major facilitator superfamily domain containing 4##NM_001973|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##NM_021795|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC050416|SLC45A3|85414|solute carrier family 45, member 3##AY033593|SLC45A3|85414|solute carrier family 45, member 3##AK313479|SLC45A3|85414|solute carrier family 45, member 3##AK290364|SLC45A3|85414|solute carrier family 45, member 3##NM_033102|SLC45A3|85414|solute carrier family 45, member 3	0.04679	
chr17	71152478	71152614	reg1006768.p1	12.918	+	TSC_hg19_v1_chr17_-_71088832 NM_001159770 NM_139177	-63698	-	BC035631 TSC_hg19_v1_chr17_-_71088831	-63715	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	-63723	-	TSC_hg19_v1_chr17_+_71161148 AK290745 BC019610 NM_001050 AK313866	8598	+	TSC_hg19_v1_chr17_+_71189175 NM_018714	36614	+	TSC_hg19_v1_chr17_+_71189196 AK098224	36645	+	NM_001159770|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##NM_139177|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK290745|SSTR2|6752|somatostatin receptor 2##BC019610|SSTR2|6752|somatostatin receptor 2##NM_001050|SSTR2|6752|somatostatin receptor 2##AK313866|SSTR2|6752|somatostatin receptor 2##NM_018714|COG1|9382|component of oligomeric golgi complex 1##AK098224|COG1|9382|component of oligomeric golgi complex 1	0.0	
chr10	135311014	135311137	reg1005329.p2	12.917	+	BC040198 TSC_hg19_v1_chr10_-_135238130 NM_001012508	-72973	-	TSC_hg19_v1_chr10_+_135207660 NM_138384 BC026039 AK308997 BC004409 AK074976 AK293988 BC035721 EU831415 EU831508 BC026725 AK292515 AK125012	-103343	+	AF312698 BC032778 NM_152911 NM_207127 NM_207128 TSC_hg19_v1_chr10_+_135192774 AY541516 AY541513 AY541514 AY541515 AY541517 AY541518 AY541519 AY541520 AY541521 AY541523 AY541524 AY358418 DQ891313 DQ893351 DQ894497 DQ896670	-118318	+	TSC_hg19_v1_chr10_+_135340866 AK290822 NM_000773 J02625 AF182276 DQ149222 BC067435 BC067433 CU688292 AF084225 AJ853939 AJ853940 AJ877238	29857	+	AK309935 AK314978 BC034821 NM_001143763 NM_001143764	68034	-	AY027807 NM_130784	71800	-	BC040198|SPRN|503542|shadow of prion protein homolog (zebrafish)##NM_001012508|SPRN|503542|shadow of prion protein homolog (zebrafish)##NM_138384|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026039|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK308997|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC004409|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK074976|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK293988|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC035721|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831415|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831508|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026725|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK292515|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK125012|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AF312698|PAOX|196743|polyamine oxidase (exo-N4-amino)##BC032778|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_152911|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207127|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207128|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541516|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541513|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541514|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541515|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541517|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541518|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541519|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541520|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541521|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541523|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541524|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY358418|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ891313|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ893351|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ894497|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ896670|PAOX|196743|polyamine oxidase (exo-N4-amino)##AK290822|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##NM_000773|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##J02625|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF182276|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##DQ149222|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067435|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067433|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF084225|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853939|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853940|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ877238|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AK309935|SYCE1|93426|synaptonemal complex central element protein 1##AK314978|SYCE1|93426|synaptonemal complex central element protein 1##BC034821|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143763|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143764|SYCE1|93426|synaptonemal complex central element protein 1##AY027807|SYCE1|93426|synaptonemal complex central element protein 1##NM_130784|SYCE1|93426|synaptonemal complex central element protein 1	0.830068	CTCF.p2:8:0.830
chr11	12985758	12985887	reg1005100.p1	12.917	+	TSC_hg19_v1_chr11_+_12960793 AK075236	-25011	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	-289859	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	-586713	+	TSC_hg19_v1_chr11_+_13030883 NM_001080521	45102	+	TSC_hg19_v1_chr11_+_13299288 NM_001030272 NM_001030273 NM_001178	313470	+	TSC_hg19_v1_chr11_+_13299331 AK315174	313510	+	AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha##NM_001080521|RASSF10|644943|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10##NM_001030272|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001030273|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001178|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK315174|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like	0.99902	CTCF.p2:-30:0.999
chr20	31377981	31378110	reg1006051.p1	12.917	+	TSC_hg19_v1_chr20_+_31367638 AF176228 NM_175850	-10398	+	TSC_hg19_v1_chr20_+_31350397 AK300857 AK299915 AF156487 AF156488 AK295176 AK299821 AK299776	-27626	+	AF331857 DQ321787 NM_001207055 NM_001207056 NM_006892 NM_175848 NM_175849 TSC_hg19_v1_chr20_+_31350190	-27853	+	TSC_hg19_v1_chr20_+_31407759 NM_012325 AK297273 BC106068 U24166 BC109281 BC040410	29690	+	TSC_hg19_v1_chr20_+_31407780 AK312590 BC128442	29751	+	BC029528 AF401350 BC026118 NM_080675	214189	-	AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AK300857|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AK299915|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AF156487|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AF156488|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AK295176|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AK299821|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AK299776|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##AF331857|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##DQ321787|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_001207055|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_001207056|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_006892|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_175848|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_175849|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_012325|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##AK297273|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC106068|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##U24166|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC109281|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC040410|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##AK312590|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC128442|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC029528|SUN5|140732|Sad1 and UNC84 domain containing 5##AF401350|SUN5|140732|Sad1 and UNC84 domain containing 5##BC026118|SUN5|140732|Sad1 and UNC84 domain containing 5##NM_080675|SUN5|140732|Sad1 and UNC84 domain containing 5	0.982993	CTCF.p2:-15:0.983
chr19	17877560	17877691	reg1006025.p1	12.916	+	NM_001161359 NM_015122 TSC_hg19_v1_chr19_+_17862326 AK316458 BC041130	-15309	+	TSC_hg19_v1_chr19_+_17858564 NM_001161357 NM_001161358 AK291410 BC028021	-19074	+	DQ387861 NM_018174 AL834233 BC067115 TSC_hg19_v1_chr19_+_17830310 BC080547 AJ440784 AK027623 BC113952 AK308975	-47316	+	TSC_hg19_v1_chr19_+_17905918 NM_014256	28291	+	TSC_hg19_v1_chr19_+_17905971 AK075466 AK314323 AK075434 AB015630 AK225421 AB049585 AY358955 BC066876 BC067423 AK225478	28334	+	BC032810 BC040435 BC053345 BC061886 BC106721 BC071706 BC106722 NM_005543 S72482 AK302780 AY082014	54722	-	NM_001161359|FCHO1|23149|FCH domain only 1##NM_015122|FCHO1|23149|FCH domain only 1##AK316458|FCHO1|23149|FCH domain only 1##BC041130|FCHO1|23149|FCH domain only 1##NM_001161357|FCHO1|23149|FCH domain only 1##NM_001161358|FCHO1|23149|FCH domain only 1##AK291410|FCHO1|23149|FCH domain only 1##BC028021|FCHO1|23149|FCH domain only 1##DQ387861|MAP1S|55201|microtubule-associated protein 1S##NM_018174|MAP1S|55201|microtubule-associated protein 1S##AL834233|MAP1S|55201|microtubule-associated protein 1S##BC067115|MAP1S|55201|microtubule-associated protein 1S##BC080547|MAP1S|55201|microtubule-associated protein 1S##AJ440784|MAP1S|55201|microtubule-associated protein 1S##AK027623|MAP1S|55201|microtubule-associated protein 1S##BC113952|MAP1S|55201|microtubule-associated protein 1S##AK308975|MAP1S|55201|microtubule-associated protein 1S##NM_014256|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK075466|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK314323|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK075434|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AB015630|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK225421|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AB049585|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AY358955|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC066876|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC067423|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK225478|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC032810|INSL3|3640|insulin-like 3 (Leydig cell)##BC040435|INSL3|3640|insulin-like 3 (Leydig cell)##BC053345|INSL3|3640|insulin-like 3 (Leydig cell)##BC061886|INSL3|3640|insulin-like 3 (Leydig cell)##BC106721|INSL3|3640|insulin-like 3 (Leydig cell)##BC071706|INSL3|3640|insulin-like 3 (Leydig cell)##BC106722|INSL3|3640|insulin-like 3 (Leydig cell)##NM_005543|INSL3|3640|insulin-like 3 (Leydig cell)##S72482|INSL3|3640|insulin-like 3 (Leydig cell)##AK302780|INSL3|3640|insulin-like 3 (Leydig cell)##AY082014|INSL3|3640|insulin-like 3 (Leydig cell)	0.0	
chr4	25443290	25443395	reg1005091.p2	12.916	+	TSC_hg19_v1_chr4_+_25378893 AK292336 AF191338	-64380	+	TSC_hg19_v1_chr4_+_25378862 NM_013367 BC059383	-64497	+	TSC_hg19_v1_chr4_+_25314405 NM_024936 BC157834 BC171821 AK299211 AK309675 AY629351 BC016914 AF161537 CU677765	-128895	+	NM_001177998 NM_006424 AK292675 AF111856 AK075046 TSC_hg19_v1_chr4_+_25657473 AF146796 BC142704 BC146666	214118	+	NM_001177999 AK314514	214748	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	421212	-	AK292336|ANAPC4|29945|anaphase promoting complex subunit 4##AF191338|ANAPC4|29945|anaphase promoting complex subunit 4##NM_013367|ANAPC4|29945|anaphase promoting complex subunit 4##BC059383|ANAPC4|29945|anaphase promoting complex subunit 4##NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4##NM_001177998|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_006424|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK292675|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF111856|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK075046|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF146796|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC142704|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC146666|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)	0.690196	CTCF.p2:-3:0.690
chrX	47886187	47886308	reg1004430.p4	12.916	+	NM_001079900 AF217622	-19075	+	AY358844 NM_205856	-22514	+	TSC_hg19_v1_chrX_-_47863389 BC114216 AK299325 AK122874 NM_001007088 NM_006962 NM_001178099	-22894	-	AK307979 AK308650 NM_001037735	44247	-	NM_001190255	44753	-	AK302765 NM_001205103	81129	+	NM_001079900|SPACA5B|729201|sperm acrosome associated 5B##AF217622|SPACA5|389852|sperm acrosome associated 5##AY358844|SPACA5|389852|sperm acrosome associated 5##NM_205856|SPACA5|389852|sperm acrosome associated 5##BC114216|ZNF182|7569|zinc finger protein 182##AK299325|ZNF182|7569|zinc finger protein 182##AK122874|ZNF182|7569|zinc finger protein 182##NM_001007088|ZNF182|7569|zinc finger protein 182##NM_006962|ZNF182|7569|zinc finger protein 182##NM_001178099|ZNF182|7569|zinc finger protein 182##AK307979|ZNF630|57232|zinc finger protein 630##NM_001037735|ZNF630|57232|zinc finger protein 630##NM_001190255|ZNF630|57232|zinc finger protein 630##AK302765|LOC100509575|100509575|putative protein SSX6-like##NM_001205103|LOC100509575|100509575|putative protein SSX6-like	1.93525	CTCF.p2:29:0.988	CTCF.p2:-47:0.948
chr12	104271839	104271970	reg1005598.p1	12.915	+	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	-36925	-	AB032773 TSC_hg19_v1_chr12_-_104234857	-37080	-	AY311388 AJ295695 NM_017564 AB052958	-290843	+	TSC_hg19_v1_chr12_+_104324159 AJ890084 AK025459	52254	+	TSC_hg19_v1_chr12_+_104324187 AK298996 AK300521 NM_003299 S74939 X15187	52283	+	TSC_hg19_v1_chr12_+_104324199 BC066656	52295	+	BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AJ890084|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK025459|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK298996|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK300521|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##NM_003299|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##X15187|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##BC066656|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1	0.97651	CTCF.p2:-10:0.977
chr2	137690422	137690536	reg1005874.p1	12.915	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-167363	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-814803	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-816681	-	NM_001080427	57982	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1031455	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	1568914	+	AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like	0.729348	CTCF.p2:-4:0.729
chr18	13558188	13558313	reg1003592.p1	12.914	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-339465	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-566905	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-610186	+	NM_001003674 NM_001003675	53414	+	AF009426 AF009427 NM_004338 NM_181483	62616	+	TSC_hg19_v1_chr18_-_13726549 AK055618	168256	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.874364	CTCF.p2:-1:0.874
chr2	61021543	61021674	reg1005215.p1	12.914	+	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	-38124	+	AF080216 TSC_hg19_v1_chr2_-_60780784	-240830	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	-241086	-	TSC_hg19_v1_chr2_+_61108702 AK303926	87097	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	87129	+	TSC_hg19_v1_chr2_+_61108776 BC143885 BC117191 X75042	87179	+	NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC143885|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC117191|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##X75042|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)	0.980463	CTCF.p2:-3:0.980
chr12	122232956	122233088	reg1005077.p3	12.913	+	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	-1448	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	-82278	+	BC057760 NM_173855	-125463	-	TSC_hg19_v1_chr12_-_122240852 AK311480	7835	-	TSC_hg19_v1_chr12_+_122242580 NM_015048 JF813787	9589	+	CU692906 DQ892664 DQ896049 BC024287 BC014790 X72389 TSC_hg19_v1_chr12_-_122296766 AK290826 NM_002150	63671	-	AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##NM_015048|SETD1B|23067|SET domain containing 1B##JF813787|SETD1B|23067|SET domain containing 1B##DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	1.458464	CTCF.p2:-13:1.000	CTCF.p2:81:0.459
chr14	77561143	77561282	reg1007260.p1	12.913	+	AK124327 TSC_hg19_v1_chr14_-_77542533	-18679	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-66152	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	-66528	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	3433	+	BC117676 TSC_hg19_v1_chr14_-_77608072	46803	-	AK294840 TSC_hg19_v1_chr14_-_77608135 AK095612 NM_174976	46923	-	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK294840|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK095612|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_174976|ZDHHC22|283576|zinc finger, DHHC-type containing 22	0.946667	CTCF.p2:-1:0.947
chr19	40476751	40476881	reg1005033.p2	12.913	+	D84239 NM_003890	-36284	-	AK296950 TSC_hg19_v1_chr19_-_40337020 NM_001436	-139781	-	TSC_hg19_v1_chr19_-_40337007 BC019260 AK308649	-139810	-	TSC_hg19_v1_chr19_+_40477090 AF020736 AK313183 NM_006503 NM_153001 BC010396 AK310135 AF038965 BC000343 BC014488 BC018811 U27515 AK290285 DQ891875 DQ894876 BT007232 CU679695	254	+	NM_178544 AK122968 AK292528 BC045649	26169	+	TSC_hg19_v1_chr19_-_40562138 AK127063 NM_001005851	85310	-	D84239|FCGBP|8857|Fc fragment of IgG binding protein##NM_003890|FCGBP|8857|Fc fragment of IgG binding protein##AK296950|FBL|2091|fibrillarin##NM_001436|FBL|2091|fibrillarin##BC019260|FBL|2091|fibrillarin##AK308649|FBL|2091|fibrillarin##AF020736|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK313183|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_006503|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_153001|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC010396|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK310135|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AF038965|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC000343|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC014488|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC018811|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##U27515|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK290285|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##DQ891875|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##DQ894876|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BT007232|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_178544|ZNF546|339327|zinc finger protein 546##AK122968|ZNF546|339327|zinc finger protein 546##AK292528|ZNF546|339327|zinc finger protein 546##BC045649|ZNF546|339327|zinc finger protein 546##AK127063|ZNF780B|163131|zinc finger protein 780B##NM_001005851|ZNF780B|163131|zinc finger protein 780B	0.343789	CTCF.p2:2:0.344
chr21	16146221	16146347	reg1006392.p1	12.913	+	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	-227635	-	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-390811	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-557787	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	290933	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	956041	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	956257	+	BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25	0.99373	CTCF.p2:1:0.994
chr11	10955404	10955524	reg1004404.p1	12.912	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-75678	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-75946	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-124667	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	688114	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	907552	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	908027	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.0	
chr12	109345012	109345144	reg1004533.p1	12.912	+	NM_001917 AX741655 AX741656 AX741658 AX776478 AX776479 AX786386 AK312995 BX538210 BC029057 BC074770	-71158	+	TSC_hg19_v1_chr12_-_109251360 BC062341 NM_001161330 NM_018984	-93656	-	AB072355 AB072356 TSC_hg19_v1_chr12_-_109251307	-93788	-	BC033587 NM_018711 TSC_hg19_v1_chr12_-_109458878	113783	-	TSC_hg19_v1_chr12_+_109490413 NM_032663 BC004868 AJ586136 CU678780 DQ893401 DQ896783	145346	+	BC070489 TSC_hg19_v1_chr12_-_109531278 AY754389 AK309062 NM_001001655 NM_001145374 NM_001145375 NM_001205179 NM_001205180	186203	-	NM_001917|DAO|1610|D-amino-acid oxidase##AX741655|DAO|1610|D-amino-acid oxidase##AX741656|DAO|1610|D-amino-acid oxidase##AX741658|DAO|1610|D-amino-acid oxidase##AX776478|DAO|1610|D-amino-acid oxidase##AX776479|DAO|1610|D-amino-acid oxidase##AX786386|DAO|1610|D-amino-acid oxidase##AK312995|DAO|1610|D-amino-acid oxidase##BX538210|DAO|1610|D-amino-acid oxidase##BC029057|DAO|1610|D-amino-acid oxidase##BC074770|DAO|1610|D-amino-acid oxidase##BC062341|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161330|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_018984|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072355|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072356|SSH1|54434|slingshot homolog 1 (Drosophila)##BC033587|SVOP|55530|SV2 related protein homolog (rat)##NM_018711|SVOP|55530|SV2 related protein homolog (rat)##NM_032663|USP30|84749|ubiquitin specific peptidase 30##BC004868|USP30|84749|ubiquitin specific peptidase 30##AJ586136|USP30|84749|ubiquitin specific peptidase 30##DQ893401|USP30|84749|ubiquitin specific peptidase 30##DQ896783|USP30|84749|ubiquitin specific peptidase 30##BC070489|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##AY754389|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##AK309062|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001001655|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001145374|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001145375|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001205179|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001205180|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)	0.998151	CTCF.p2:22:0.998
chr7	113061896	113062021	reg1006291.p1	12.911	+	TSC_hg19_v1_chr7_-_112758613 BC107860	-303329	-	TSC_hg19_v1_chr7_-_112758606 BC065765 BX537645	-303352	-	NM_001146265 NM_018970 TSC_hg19_v1_chr7_-_112727844	-334118	-	X78578 AF024579 HQ258594 BC070313 BC056666 NM_002711 BC126451 BC126453	497125	-	TSC_hg19_v1_chr7_+_113726381 AK131266	664463	+	TSC_hg19_v1_chr7_+_113726514 AF454830	664545	+	BC107860|LOC401397|401397|uncharacterized LOC401397##BC065765|LOC401397|401397|uncharacterized LOC401397##BX537645|LOC401397|401397|uncharacterized LOC401397##NM_001146265|GPR85|54329|G protein-coupled receptor 85##NM_018970|GPR85|54329|G protein-coupled receptor 85##X78578|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AF024579|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##HQ258594|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC070313|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC056666|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##NM_002711|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126451|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126453|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AK131266|FOXP2|93986|forkhead box P2##AF454830|FOXP2|93986|forkhead box P2	1.792431	CTCF.p2:-15:0.794	CTCF.p2:21:0.998
chr17	43669842	43669956	reg1004387.p1	12.910	+	TSC_hg19_v1_chr17_-_43568133 NM_014798	-101745	-	TSC_hg19_v1_chr17_-_43568118 AK299116 BC053848 AB002354 BC064361	-101797	-	TSC_hg19_v1_chr17_-_43510292 BC067345 NM_174919	-159612	-	TSC_hg19_v1_chr17_+_43861628 NM_001145146 NM_001145147 NM_001145148 NM_004382	191737	+	BC037967 HM852949 TSC_hg19_v1_chr17_+_43861685 X72304	191779	+	BC025401 NM_175882 BC022041	252357	+	NM_014798|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##AK299116|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC053848|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##AB002354|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC064361|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC067345|ARHGAP27|201176|Rho GTPase activating protein 27##NM_174919|ARHGAP27|201176|Rho GTPase activating protein 27##NM_001145146|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145147|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145148|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_004382|CRHR1|1394|corticotropin releasing hormone receptor 1##BC037967|CRHR1|1394|corticotropin releasing hormone receptor 1##X72304|CRHR1|1394|corticotropin releasing hormone receptor 1##BC025401|IMP5|162540|intramembrane protease 5##NM_175882|IMP5|162540|intramembrane protease 5##BC022041|IMP5|162540|intramembrane protease 5	0.999815	CTCF.p2:6:1.000
chr21	44559224	44559343	reg1006054.p1	12.910	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-31599	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-31658	-	L19501 BC007257 NM_001178008 NM_001178009	-62836	-	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	29891	+	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	286706	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	287712	-	NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##L19501|CBS|875|cystathionine-beta-synthase##BC007257|CBS|875|cystathionine-beta-synthase##NM_001178008|CBS|875|cystathionine-beta-synthase##NM_001178009|CBS|875|cystathionine-beta-synthase##NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1	0.9782	CTCF.p2:-8:0.978
chr2	61226174	61226310	reg1004808.p2	12.910	+	TSC_hg19_v1_chr2_+_61108776 BC143885 BC117191 X75042	-117455	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	-117505	+	TSC_hg19_v1_chr2_+_61108702 AK303926	-117537	+	TSC_hg19_v1_chr2_-_61244326 AK291729 BC065197	18075	-	AK311426 NM_002618 TSC_hg19_v1_chr2_+_61244828	18527	+	TSC_hg19_v1_chr2_+_61244858 AK315244 AB022192 AF048755 BC067090 BC020547 BC040953 BC048804 BC035584 AB528913 CU688242 U71374	18632	+	BC143885|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC117191|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##X75042|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##AK291729|PUS10|150962|pseudouridylate synthase 10##NM_002618|PEX13|5194|peroxisomal biogenesis factor 13##AK315244|PEX13|5194|peroxisomal biogenesis factor 13##AB022192|PEX13|5194|peroxisomal biogenesis factor 13##AF048755|PEX13|5194|peroxisomal biogenesis factor 13##BC067090|PEX13|5194|peroxisomal biogenesis factor 13##U71374|PEX13|5194|peroxisomal biogenesis factor 13	0.988419	CTCF.p2:21:0.988
chr1	203185456	203185572	reg1005210.p2	12.909	+	TSC_hg19_v1_chr1_-_203155913 NM_001276	-29588	-	BC008568 TSC_hg19_v1_chr1_-_203155877 AK312911	-29626	-	TSC_hg19_v1_chr1_-_203155832 AK225266 AK225584 AK130142 AK130200	-29683	-	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	13301	-	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	89175	+	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	131870	-	NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK225266|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK225584|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK130142|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK130200|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin	0.999123	CTCF.p2:0:0.999
chr1	229363311	229363451	reg1006144.p1	12.909	+	TSC_hg19_v1_chr1_+_228871199 AB209511 AK289971 BC040076 AF282258 AB074878 AB051826 AF378087	-492082	+	TSC_hg19_v1_chr1_+_228870806 NM_021205 AF211836	-492537	+	AK055963 TSC_hg19_v1_chr1_+_228783500	-579950	+	AK313807 TSC_hg19_v1_chr1_+_229406857 BC004309 NM_004578 AY585832	43504	+	BC002438 TSC_hg19_v1_chr1_+_229407039 AK223009 M28211 AB463206 AF498934 AM392940 AM393585 DQ892636 DQ895874	43669	+	BC107681 NM_006542	76747	+	AB209511|RHOU|58480|ras homolog gene family, member U##AK289971|RHOU|58480|ras homolog gene family, member U##BC040076|RHOU|58480|ras homolog gene family, member U##AF282258|RHOU|58480|ras homolog gene family, member U##AB074878|RHOU|58480|ras homolog gene family, member U##AB051826|RHOU|58480|ras homolog gene family, member U##AF378087|RHOU|58480|ras homolog gene family, member U##NM_021205|RHOU|58480|ras homolog gene family, member U##AF211836|RHOU|58480|ras homolog gene family, member U##AK055963|DUSP5P|574029|dual specificity phosphatase 5 pseudogene##AK313807|RAB4A|5867|RAB4A, member RAS oncogene family##BC004309|RAB4A|5867|RAB4A, member RAS oncogene family##NM_004578|RAB4A|5867|RAB4A, member RAS oncogene family##AY585832|RAB4A|5867|RAB4A, member RAS oncogene family##BC002438|RAB4A|5867|RAB4A, member RAS oncogene family##AK223009|RAB4A|5867|RAB4A, member RAS oncogene family##M28211|RAB4A|5867|RAB4A, member RAS oncogene family##AF498934|RAB4A|5867|RAB4A, member RAS oncogene family##AM392940|RAB4A|5867|RAB4A, member RAS oncogene family##AM393585|RAB4A|5867|RAB4A, member RAS oncogene family##DQ892636|RAB4A|5867|RAB4A, member RAS oncogene family##DQ895874|RAB4A|5867|RAB4A, member RAS oncogene family##BC107681|SPHAR|10638|S-phase response (cyclin related)##NM_006542|SPHAR|10638|S-phase response (cyclin related)	0.952615	CTCF.p2:11:0.953
chr1	27684115	27684221	reg1004879.p2	12.909	+	TSC_hg19_v1_chr1_+_27668575 AK027902 AK096437 AY037157 BC035725	-15631	+	TSC_hg19_v1_chr1_+_27668486 NM_001193308 NM_032872	-15693	+	TSC_hg19_v1_chr1_+_27648756 EU831420 EU831513 AF251699 AK222642 AK307077 BX648289	-35352	+	AB208805 TSC_hg19_v1_chr1_-_27692832	8662	-	NM_004672 TSC_hg19_v1_chr1_-_27693415	9209	-	AY358081 CR456808 DQ892028 DQ895220 AK309540 AK075140 AK309576 BC020731 NM_003665 NM_173452 AY358283	17147	-	AK027902|SYTL1|84958|synaptotagmin-like 1##AK096437|SYTL1|84958|synaptotagmin-like 1##AY037157|SYTL1|84958|synaptotagmin-like 1##BC035725|SYTL1|84958|synaptotagmin-like 1##NM_001193308|SYTL1|84958|synaptotagmin-like 1##NM_032872|SYTL1|84958|synaptotagmin-like 1##EU831420|TMEM222|84065|transmembrane protein 222##EU831513|TMEM222|84065|transmembrane protein 222##AF251699|TMEM222|84065|transmembrane protein 222##AK222642|TMEM222|84065|transmembrane protein 222##AK307077|TMEM222|84065|transmembrane protein 222##BX648289|LOC644961|644961|actin, beta pseudogene##AB208805|MAP3K6|9064|mitogen-activated protein kinase kinase kinase 6##NM_004672|MAP3K6|9064|mitogen-activated protein kinase kinase kinase 6##AY358081|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##CR456808|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##DQ892028|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##DQ895220|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AK309540|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AK075140|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##BC020731|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_003665|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_173452|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AY358283|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)	0.9999	CTCF.p2:8:1.000
chr4	160868304	160868440	reg1003825.p1	12.909	+	AK294459 NM_014247	-679375	+	AK058100 NM_152543	-912040	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-1178087	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	2216779	-	TSC_hg19_v1_chr4_-_164088002 AK097352	3219620	-	TSC_hg19_v1_chr4_-_164088043 AK308601	3219665	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.996107	CTCF.p2:-28:0.996
chr8	19612269	19612388	reg1006198.p1	12.909	+	AY358441 NM_018371	-72235	-	BX649103 NM_001130518	-152298	-	TSC_hg19_v1_chr8_+_19171505 NM_001174160 NM_022071 AK024799 AK293301 BC082982 NM_001174159	-441045	+	AK314625 TSC_hg19_v1_chr8_-_19615422	3089	-	TSC_hg19_v1_chr8_+_19674936 NM_018142	62593	+	TSC_hg19_v1_chr8_+_19674972 AK001431 AB590485	62675	+	AY358441|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018371|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##BX649103|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_001130518|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_001174160|SH2D4A|63898|SH2 domain containing 4A##NM_022071|SH2D4A|63898|SH2 domain containing 4A##AK024799|SH2D4A|63898|SH2 domain containing 4A##AK293301|SH2D4A|63898|SH2 domain containing 4A##BC082982|SH2D4A|63898|SH2 domain containing 4A##NM_001174159|SH2D4A|63898|SH2 domain containing 4A##AK314625|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018142|INTS10|55174|integrator complex subunit 10##AK001431|INTS10|55174|integrator complex subunit 10	0.0	
chrX	153218909	153219028	reg1005308.p1	12.908	+	BC010606 TSC_hg19_v1_chrX_-_153218266	-756	-	D10232 AB527578 BC015558 TSC_hg19_v1_chrX_-_153210096 AK298125 NM_002910	-8824	-	TSC_hg19_v1_chrX_-_153200473 AB528068 AM392552 AM393827 X77588 BC063377 AK296593 AK309083 AY183134 AY183135 BC000308 BC019312 NM_003491 AK294081 AK315997	-18532	-	TSC_hg19_v1_chrX_-_153236650 L20010 BC063435 NM_005334	17751	-	NM_003492	19022	+	AF346607 DQ054788 AM392624 AM393211 EU831427 EU831520 AB463802 TSC_hg19_v1_chrX_-_153285300 BC014963	66327	-	BC010606|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##D10232|RENBP|5973|renin binding protein##BC015558|RENBP|5973|renin binding protein##AK298125|RENBP|5973|renin binding protein##NM_002910|RENBP|5973|renin binding protein##AM392552|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AM393827|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##X77588|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##BC063377|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AK296593|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AK309083|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AY183134|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AY183135|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##BC000308|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##BC019312|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##NM_003491|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AK294081|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##L20010|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##BC063435|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##NM_005334|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##NM_003492|TMEM187|8269|transmembrane protein 187##AF346607|IRAK1|3654|interleukin-1 receptor-associated kinase 1##DQ054788|IRAK1|3654|interleukin-1 receptor-associated kinase 1##AM392624|IRAK1|3654|interleukin-1 receptor-associated kinase 1##AM393211|IRAK1|3654|interleukin-1 receptor-associated kinase 1##EU831427|IRAK1|3654|interleukin-1 receptor-associated kinase 1##EU831520|IRAK1|3654|interleukin-1 receptor-associated kinase 1##BC014963|IRAK1|3654|interleukin-1 receptor-associated kinase 1	0.136299	
chr7	35946154	35946286	reg1006832.p1	12.907	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	-105368	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	-105387	+	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	-105510	+	TSC_hg19_v1_chr7_+_36192789 NM_030636	246585	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	246663	+	TSC_hg19_v1_chr7_+_36193025 AB051493	246835	+	DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##NM_030636|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1	0.996691	CTCF.p2:24:0.997
chr2	61653562	61653683	reg1006309.p1	12.906	+	TSC_hg19_v1_chr2_+_61404793 AL833813	-248833	+	TSC_hg19_v1_chr2_+_61404649 BC063789	-248980	+	TSC_hg19_v1_chr2_+_61404606 BC030998 NM_152392 BC050395	-249039	+	TSC_hg19_v1_chr2_-_61697846 NM_014709	44235	-	TSC_hg19_v1_chr2_-_61697899 AB011142 BC141839	44321	-	TSC_hg19_v1_chr2_-_61764664 Y08614 AK312426	111136	-	AL833813|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##BC063789|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##BC030998|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##NM_152392|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##BC050395|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##NM_014709|USP34|9736|ubiquitin specific peptidase 34##AB011142|USP34|9736|ubiquitin specific peptidase 34##BC141839|USP34|9736|ubiquitin specific peptidase 34##Y08614|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##AK312426|XPO1|7514|exportin 1 (CRM1 homolog, yeast)	0.342242	CTCF.p2:-9:0.342
chr3	58626485	58626614	reg1006445.p1	12.906	+	AF035283 NM_001076778 NM_007177	-63059	-	AB023811 TSC_hg19_v1_chr3_-_58563116 BC010561 AL050264 AK055443 AK128791 BC093012	-63440	-	AK298402 AK313512 BC033517 BC047700 TSC_hg19_v1_chr3_-_58522918 NM_003500	-103649	-	BC015359 TSC_hg19_v1_chr3_-_58652501 AK127546 NM_138805 AY358677	25972	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	409159	-	BC075863 TSC_hg19_v1_chr3_-_59035746	409192	-	AF035283|FAM107A|11170|family with sequence similarity 107, member A##NM_001076778|FAM107A|11170|family with sequence similarity 107, member A##NM_007177|FAM107A|11170|family with sequence similarity 107, member A##AB023811|FAM107A|11170|family with sequence similarity 107, member A##BC010561|FAM107A|11170|family with sequence similarity 107, member A##AL050264|FAM107A|11170|family with sequence similarity 107, member A##AK055443|FAM107A|11170|family with sequence similarity 107, member A##AK128791|FAM107A|11170|family with sequence similarity 107, member A##BC093012|FAM107A|11170|family with sequence similarity 107, member A##AK298402|ACOX2|8309|acyl-CoA oxidase 2, branched chain##AK313512|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC033517|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC047700|ACOX2|8309|acyl-CoA oxidase 2, branched chain##NM_003500|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC015359|FAM3D|131177|family with sequence similarity 3, member D##AK127546|FAM3D|131177|family with sequence similarity 3, member D##NM_138805|FAM3D|131177|family with sequence similarity 3, member D##AY358677|FAM3D|131177|family with sequence similarity 3, member D##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67	0.831918	CTCF.p2:-18:0.832
chr6	137415628	137415768	reg1003970.p1	12.906	+	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	-49453	-	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	-49860	-	AK316095 BC087842 NM_001008783 AK295424	-172245	+	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	79053	-	TSC_hg19_v1_chr6_-_137540496 BT006814 AB527981 CU675119 AF056979 AK294252	124770	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	124814	-	AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2##BT006814|IFNGR1|3459|interferon gamma receptor 1##AF056979|IFNGR1|3459|interferon gamma receptor 1##AK294252|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1	0.738472	CTCF.p2:-19:0.738
chr1	200591554	200591687	reg1005323.p1	12.905	+	TSC_hg19_v1_chr1_-_200589869 D26361 NM_014875	-1741	-	BC060820 NM_012482 TSC_hg19_v1_chr1_-_200379187 AK027284	-212426	-	TSC_hg19_v1_chr1_-_200379155 AK297233 AK022916 AK094701	-212503	-	AK299219 BC020201 TSC_hg19_v1_chr1_-_200639024 AL136611 BC014183 AK307569	47409	-	TSC_hg19_v1_chr1_-_200639091 BC041801 NM_001031725	47488	-	TSC_hg19_v1_chr1_+_200708732 AK095640 NM_203459	117051	+	D26361|KIF14|9928|kinesin family member 14##NM_014875|KIF14|9928|kinesin family member 14##BC060820|ZNF281|23528|zinc finger protein 281##NM_012482|ZNF281|23528|zinc finger protein 281##AK027284|ZNF281|23528|zinc finger protein 281##AK297233|ZNF281|23528|zinc finger protein 281##AK022916|ZNF281|23528|zinc finger protein 281##AK094701|ZNF281|23528|zinc finger protein 281##AK299219|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC020201|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AL136611|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC014183|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK307569|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC041801|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_001031725|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2	0.813994	CTCF.p2:-16:0.814
chr2	114006884	114007005	reg1004706.p1	12.905	+	TSC_hg19_v1_chr2_+_113993123 AK056052 AK307781 BX537688 AK056355 AK130275	-13674	+	TSC_hg19_v1_chr2_+_113931576 BC035307 BC073151	-75363	+	AK290045 TSC_hg19_v1_chr2_+_113931556 AB208798 NM_012455	-75390	+	S77904 S77905 S77906 X69699 BC001060 AK292191 AK309154 AK225538 NM_003466 NM_013952 NM_013953 NM_013992 TSC_hg19_v1_chr2_-_114036499	29549	-	AK290072 NM_172003 AK303653 AY343910 TSC_hg19_v1_chr2_+_114195398 AY320414 BC120991 BC120992 AK225251 AF452722	188395	+	AK122950 NM_012184 BC136428 AY344639 AF452723	249792	+	AK056052|LOC654433|654433|uncharacterized LOC654433##AK307781|LOC654433|654433|uncharacterized LOC654433##BX537688|LOC654433|654433|uncharacterized LOC654433##AK056355|LOC654433|654433|uncharacterized LOC654433##AK130275|LOC654433|654433|uncharacterized LOC654433##BC035307|PSD4|23550|pleckstrin and Sec7 domain containing 4##BC073151|PSD4|23550|pleckstrin and Sec7 domain containing 4##AK290045|PSD4|23550|pleckstrin and Sec7 domain containing 4##AB208798|PSD4|23550|pleckstrin and Sec7 domain containing 4##NM_012455|PSD4|23550|pleckstrin and Sec7 domain containing 4##S77904|PAX8|7849|paired box 8##S77905|PAX8|7849|paired box 8##S77906|PAX8|7849|paired box 8##X69699|PAX8|7849|paired box 8##BC001060|PAX8|7849|paired box 8##AK292191|PAX8|7849|paired box 8##AK309154|PAX8|7849|paired box 8##AK225538|PAX8|7849|paired box 8##NM_003466|PAX8|7849|paired box 8##NM_013952|PAX8|7849|paired box 8##NM_013953|PAX8|7849|paired box 8##NM_013992|PAX8|7849|paired box 8##AK290072|CBWD2|150472|COBW domain containing 2##NM_172003|CBWD2|150472|COBW domain containing 2##AK303653|CBWD2|150472|COBW domain containing 2##AY343910|CBWD2|150472|COBW domain containing 2##AY320414|CBWD1|55871|COBW domain containing 1##BC120991|CBWD2|150472|COBW domain containing 2##BC120992|CBWD2|150472|COBW domain containing 2##AK225251|CBWD2|150472|COBW domain containing 2##AF452722|CBWD2|150472|COBW domain containing 2##AK122950|FOXD4L1|200350|forkhead box D4-like 1##NM_012184|FOXD4L1|200350|forkhead box D4-like 1##BC136428|FOXD4L1|200350|forkhead box D4-like 1##AY344639|FOXD4L1|200350|forkhead box D4-like 1##AF452723|FOXD4L1|200350|forkhead box D4-like 1	0.992331	CTCF.p2:-13:0.992
chr5	67756090	67756214	reg1005462.p1	12.905	+	AK094785 NM_001242466 AK294919	-167700	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-169606	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-171858	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	633651	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	633730	+	AK292925 TSC_hg19_v1_chr5_+_68389913	633761	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.998346	CTCF.p2:24:0.998
chr8	87137442	87137563	reg1005169.p2	12.905	+	BC065207 TSC_hg19_v1_chr8_+_87111138 AK096027 NM_152565 AY079172	-26358	+	AY037806 HQ258398 NM_033126 BC126180 BC126182 BC144195	-55615	-	NM_172239	-348197	-	AJ417661 BC125165 BC125166 AK055815 NM_138817 BC029436	105056	-	TSC_hg19_v1_chr8_+_87354966 AY345857 AK292800 BC036065 NM_007013	217548	+	CU679433 BX640636 AK303122 TSC_hg19_v1_chr8_-_87520885 BC009671 AK297896 AF151848 AK000672	383411	-	BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AY037806|PSKH2|85481|protein serine kinase H2##HQ258398|PSKH2|85481|protein serine kinase H2##NM_033126|PSKH2|85481|protein serine kinase H2##BC126180|PSKH2|85481|protein serine kinase H2##BC126182|PSKH2|85481|protein serine kinase H2##BC144195|PSKH2|85481|protein serine kinase H2##NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1##AJ417661|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC125165|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC125166|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##AK055815|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##NM_138817|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC029436|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##AY345857|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##AK292800|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##BC036065|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##NM_007013|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##BX640636|FAM82B|51115|family with sequence similarity 82, member B##AK303122|FAM82B|51115|family with sequence similarity 82, member B##BC009671|FAM82B|51115|family with sequence similarity 82, member B##AK297896|FAM82B|51115|family with sequence similarity 82, member B##AF151848|FAM82B|51115|family with sequence similarity 82, member B##AK000672|FAM82B|51115|family with sequence similarity 82, member B	0.868945	CTCF.p2:5:0.869
chr9	139233780	139233901	reg1005868.p1	12.905	+	BC009979 BC017353 NM_001145638 NM_015597 TSC_hg19_v1_chr9_+_139221994	-11874	+	BC047604 AB527428 TSC_hg19_v1_chr9_-_139137659 AJ318051 NM_181701	-96155	-	AF156888 NM_178138 AB593067 AB593063 AB593062	-136876	-	NM_001145639	13668	+	NM_001200003	15411	+	NM_001080849 BC146915 BC146924 BC171835	24411	-	BC009979|GPSM1|26086|G-protein signaling modulator 1##BC017353|GPSM1|26086|G-protein signaling modulator 1##NM_001145638|GPSM1|26086|G-protein signaling modulator 1##NM_015597|GPSM1|26086|G-protein signaling modulator 1##BC047604|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##AJ318051|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##NM_181701|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##AF156888|LHX3|8022|LIM homeobox 3##NM_178138|LHX3|8022|LIM homeobox 3##AB593067|LHX3|8022|LIM homeobox 3##AB593063|LHX3|8022|LIM homeobox 3##AB593062|LHX3|8022|LIM homeobox 3##NM_001145639|GPSM1|26086|G-protein signaling modulator 1##NM_001200003|GPSM1|26086|G-protein signaling modulator 1##NM_001080849|DNLZ|728489|DNL-type zinc finger##BC146915|DNLZ|728489|DNL-type zinc finger##BC146924|DNLZ|728489|DNL-type zinc finger##BC171835|DNLZ|728489|DNL-type zinc finger	0.905324	CTCF.p2:0:0.905
chr1	183197221	183197346	reg1006462.p1	12.904	+	TSC_hg19_v1_chr1_+_183155398 AK296944 X73902 BC112286 BC113378 BC143653	-41864	+	AK307945 Z15008 Z15009 TSC_hg19_v1_chr1_+_183155386	-41910	+	NM_005562 NM_018891 TSC_hg19_v1_chr1_+_183155211	-42091	+	BC020998 NM_170706	76725	-	AB383893 TSC_hg19_v1_chr1_-_183387486	190166	-	AB007948 TSC_hg19_v1_chr1_-_183387507 AK291390 NM_015039 AF288395	190335	-	AK296944|LAMC2|3918|laminin, gamma 2##X73902|LAMC2|3918|laminin, gamma 2##BC112286|LAMC2|3918|laminin, gamma 2##BC113378|LAMC2|3918|laminin, gamma 2##BC143653|LAMC2|3918|laminin, gamma 2##AK307945|LAMC2|3918|laminin, gamma 2##Z15008|LAMC2|3918|laminin, gamma 2##Z15009|LAMC2|3918|laminin, gamma 2##NM_005562|LAMC2|3918|laminin, gamma 2##NM_018891|LAMC2|3918|laminin, gamma 2##BC020998|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##NM_170706|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AB007948|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AK291390|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##NM_015039|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AF288395|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	0.068302	
chr20	43017280	43017391	reg1005749.p1	12.904	+	TSC_hg19_v1_chr20_+_42984338 AY680696 AY680697 AY680698 NM_001030003 NM_001030004 NM_175914 FJ608822 HQ692868	-32944	+	TSC_hg19_v1_chr20_+_42984088 AK096973	-33242	+	NM_178491	-51710	+	TSC_hg19_v1_chr20_-_43024303 AF143870	6989	-	TSC_hg19_v1_chr20_+_43029888 Z49825 NM_000457 NM_178849 NM_178850	12559	+	X87872 X87870 TSC_hg19_v1_chr20_+_43029954 X87871	12611	+	AY680696|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AY680697|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AY680698|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_001030003|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_001030004|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_175914|HNF4A|3172|hepatocyte nuclear factor 4, alpha##FJ608822|HNF4A|3172|hepatocyte nuclear factor 4, alpha##HQ692868|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AK096973|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_178491|R3HDML|140902|R3H domain containing-like##Z49825|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_000457|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_178849|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_178850|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87872|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87870|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87871|HNF4A|3172|hepatocyte nuclear factor 4, alpha	0.280952	CTCF.p2:2:0.281
chr7	99971620	99971737	reg1005360.p1	12.904	+	TSC_hg19_v1_chr7_+_99971132 AJ400842 AJ400843 AK298731 AB590724 CU676074	-473	+	AF161080 NM_013439 NM_178272 NM_178273 BC017812 TSC_hg19_v1_chr7_+_99971109 AJ400841	-582	+	AJ400845 NM_178238 AF161081	-16047	+	AK302108 AK300745 TSC_hg19_v1_chr7_-_100026299 AL136735 NM_017984 AK299989	54624	-	NM_001194990 NM_001194991 NM_001194992 TSC_hg19_v1_chr7_+_100026412	54734	+	TSC_hg19_v1_chr7_+_100026415 AK055964	54750	+	AJ400842|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400843|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AK298731|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AF161080|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_013439|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178272|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178273|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##BC017812|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400841|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400845|PILRB|29990|paired immunoglobin-like type 2 receptor beta##NM_178238|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AF161081|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AK302108|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##AK300745|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##AL136735|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##NM_017984|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##AK299989|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##NM_001194990|MEPCE|56257|methylphosphate capping enzyme##NM_001194991|MEPCE|56257|methylphosphate capping enzyme##NM_001194992|MEPCE|56257|methylphosphate capping enzyme##AK055964|MEPCE|56257|methylphosphate capping enzyme	0.5102	CTCF.p2:-12:0.510
chr8	21894412	21894524	reg1006723.p1	12.904	+	AY262114 NM_182795 BC068078	-12111	+	TSC_hg19_v1_chr8_+_21881644 AK094267	-12833	+	TSC_hg19_v1_chr8_+_21777257 AK291472 AB018288 AF064729 CU689010	-117220	+	BC105131 BC113489 BC143789 AY358869 AB009249 BC069475 NM_003867 HQ258756	5946	+	TSC_hg19_v1_chr8_+_21911080 NM_001114137 BC052805	16640	+	NM_001114136 NM_001114139 TSC_hg19_v1_chr8_+_21912417 AK289650 AK091581 AK308807	17908	+	AY262114|NPM2|10361|nucleophosmin/nucleoplasmin 2##NM_182795|NPM2|10361|nucleophosmin/nucleoplasmin 2##BC068078|NPM2|10361|nucleophosmin/nucleoplasmin 2##AK094267|NPM2|10361|nucleophosmin/nucleoplasmin 2##AK291472|XPO7|23039|exportin 7##AB018288|XPO7|23039|exportin 7##AF064729|XPO7|23039|exportin 7##BC105131|FGF17|8822|fibroblast growth factor 17##BC113489|FGF17|8822|fibroblast growth factor 17##BC143789|FGF17|8822|fibroblast growth factor 17##AY358869|FGF17|8822|fibroblast growth factor 17##AB009249|FGF17|8822|fibroblast growth factor 17##BC069475|FGF17|8822|fibroblast growth factor 17##NM_003867|FGF17|8822|fibroblast growth factor 17##HQ258756|FGF17|8822|fibroblast growth factor 17##NM_001114137|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##BC052805|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##NM_001114136|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##NM_001114139|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##AK289650|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##AK091581|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##AK308807|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	0.98964	CTCF.p2:1:0.990
chr1	17372677	17372820	reg1006468.p1	12.903	+	AL354615 AY461712 TSC_hg19_v1_chr1_-_17338424 BC030267 AK290210 NM_001141973 NM_001141974 NM_022089	-34365	-	AK301655 NM_001135247 NM_017459	-64672	-	TSC_hg19_v1_chr1_-_17307116 BC028033 AK222751 BC015039 NM_001135248 NM_002403	-65599	-	DQ403007 TSC_hg19_v1_chr1_-_17380528 AK312056 U17248 BC007840 NM_003000	7827	-	AB587350 AB023211 AB030176 BC009701 TSC_hg19_v1_chr1_-_17445947 AK295783 NM_007365	73159	-	AK314644 AK026652 AK225541 NM_013358 AB033768 BC130574 BC136402 HQ258487	158917	+	AL354615|ATP13A2|23400|ATPase type 13A2##AY461712|ATP13A2|23400|ATPase type 13A2##BC030267|ATP13A2|23400|ATPase type 13A2##AK290210|ATP13A2|23400|ATPase type 13A2##NM_001141973|ATP13A2|23400|ATPase type 13A2##NM_001141974|ATP13A2|23400|ATPase type 13A2##NM_022089|ATP13A2|23400|ATPase type 13A2##AK301655|MFAP2|4237|microfibrillar-associated protein 2##NM_001135247|MFAP2|4237|microfibrillar-associated protein 2##NM_017459|MFAP2|4237|microfibrillar-associated protein 2##BC028033|MFAP2|4237|microfibrillar-associated protein 2##AK222751|MFAP2|4237|microfibrillar-associated protein 2##BC015039|MFAP2|4237|microfibrillar-associated protein 2##NM_001135248|MFAP2|4237|microfibrillar-associated protein 2##NM_002403|MFAP2|4237|microfibrillar-associated protein 2##DQ403007|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AK312056|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##U17248|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##BC007840|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##NM_003000|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AB023211|PADI2|11240|peptidyl arginine deiminase, type II##AB030176|PADI2|11240|peptidyl arginine deiminase, type II##BC009701|PADI2|11240|peptidyl arginine deiminase, type II##AK295783|PADI2|11240|peptidyl arginine deiminase, type II##NM_007365|PADI2|11240|peptidyl arginine deiminase, type II##AK314644|PADI1|29943|peptidyl arginine deiminase, type I##AK026652|PADI1|29943|peptidyl arginine deiminase, type I##AK225541|PADI1|29943|peptidyl arginine deiminase, type I##NM_013358|PADI1|29943|peptidyl arginine deiminase, type I##AB033768|PADI1|29943|peptidyl arginine deiminase, type I##BC130574|PADI1|29943|peptidyl arginine deiminase, type I##BC136402|PADI1|29943|peptidyl arginine deiminase, type I##HQ258487|PADI1|29943|peptidyl arginine deiminase, type I	0.949598	CTCF.p2:22:0.950
chr15	34659862	34659993	reg1005214.p2	12.903	+	AF529233 TSC_hg19_v1_chr15_-_34659398 BC144236 AK290273 AK308910 AL832237 BC092463 NM_153613 BC048430 AY734233 AF542964	-347	-	AF482429 NM_175741 BC114518 BC114567 BC033392 AK098568	-21799	+	BC008886 TSC_hg19_v1_chr15_-_34635355 BC063023 AB043104 NM_018648	-24592	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_181077	22018	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_001023567	168239	-	BX647673 TSC_hg19_v1_chr15_-_34875067	215142	-	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AF482429|C15orf55|256646|chromosome 15 open reading frame 55##NM_175741|C15orf55|256646|chromosome 15 open reading frame 55##BC114518|C15orf55|256646|chromosome 15 open reading frame 55##BC114567|C15orf55|256646|chromosome 15 open reading frame 55##BC033392|C15orf55|256646|chromosome 15 open reading frame 55##AK098568|C15orf55|256646|chromosome 15 open reading frame 55##BC008886|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)##BC063023|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)##AB043104|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)##NM_018648|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_181077|GOLGA8A|23015|golgin A8 family, member A##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_001023567|GOLGA8B|440270|golgin A8 family, member B##BX647673|GOLGA8B|440270|golgin A8 family, member B	0.185849	
chr11	5226145	5226273	reg1005740.p1	12.902	+	NM_001004760 AB528808	-4280	-	AB463975 BC111691 BC111722 NM_012375	-52611	-	AY726590 NM_001005160 AB463976	-72370	-	DQ655983 AF181832 AY136510 CR536530 CR541913 M25113 V00500 CU675537 AM392537 AM393351 DQ893159 DQ896453 EU176774 AF117710 AF181989 AF349114 TSC_hg19_v1_chr11_-_5248302 AK311825 AY509193 BC007075 EU694432 NM_000518 V00497 M14574	22033	-	BC069307 BC070282 AY034468 NM_000519	29575	-	DQ892801 DQ896048 NM_000559 BC010913	44852	-	NM_001004760|OR51V1|283111|olfactory receptor, family 51, subfamily V, member 1##BC111691|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1##BC111722|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1##NM_012375|OR52A1|23538|olfactory receptor, family 52, subfamily A, member 1##AY726590|OR52A5|390054|olfactory receptor, family 52, subfamily A, member 5##NM_001005160|OR52A5|390054|olfactory receptor, family 52, subfamily A, member 5##AF181832|HBB|3043|hemoglobin, beta##AY136510|HBB|3043|hemoglobin, beta##CR536530|HBB|3043|hemoglobin, beta##CR541913|HBB|3043|hemoglobin, beta##M25113|HBB|3043|hemoglobin, beta##V00500|HBB|3043|hemoglobin, beta##AM392537|HBB|3043|hemoglobin, beta##AM393351|HBB|3043|hemoglobin, beta##DQ893159|HBB|3043|hemoglobin, beta##DQ896453|HBB|3043|hemoglobin, beta##EU176774|HBB|3043|hemoglobin, beta##AF117710|HBB|3043|hemoglobin, beta##AF181989|HBB|3043|hemoglobin, beta##AF349114|HBB|3043|hemoglobin, beta##AK311825|HBB|3043|hemoglobin, beta##AY509193|HBB|3043|hemoglobin, beta##BC007075|HBB|3043|hemoglobin, beta##EU694432|HBB|3043|hemoglobin, beta##NM_000518|HBB|3043|hemoglobin, beta##V00497|HBB|3043|hemoglobin, beta##BC069307|HBD|3045|hemoglobin, delta##BC070282|HBD|3045|hemoglobin, delta##AY034468|HBD|3045|hemoglobin, delta##NM_000519|HBD|3045|hemoglobin, delta##DQ892801|HBG1|3047|hemoglobin, gamma A##DQ896048|HBG1|3047|hemoglobin, gamma A##NM_000559|HBG1|3047|hemoglobin, gamma A##BC010913|HBG1|3047|hemoglobin, gamma A	0.765229	CTCF.p2:-6:0.765
chr19	38734585	38734718	reg1005382.p1	12.902	+	TSC_hg19_v1_chr19_-_38720336 AK297581	-14317	-	BC021191 TSC_hg19_v1_chr19_-_38720320 NM_001135156	-14335	-	AB463560 GQ358728 BC125152 BC125153 U43843 AK308563 NM_001135155 NM_004647	-19816	-	CU676810 DQ892130 DQ895324 BC021089 TSC_hg19_v1_chr19_-_38747015 AF123763 AY050670	12345	-	AB056508 AB056509 NM_001243947 NM_033256	12549	-	NM_001166103 NM_021102 BC001668 TSC_hg19_v1_chr19_+_38755212 AX772830 AB006534 BC012868	20509	+	AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1##BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1##GQ358728|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125152|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125153|DPF1|8193|D4, zinc and double PHD fingers family 1##U43843|DPF1|8193|D4, zinc and double PHD fingers family 1##AK308563|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135155|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_004647|DPF1|8193|D4, zinc and double PHD fingers family 1##DQ892130|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##DQ895324|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##BC021089|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##AF123763|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##AY050670|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##AB056508|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##AB056509|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##NM_001243947|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##NM_033256|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##NM_001166103|SPINT2|10653|serine peptidase inhibitor, Kunitz type, 2##NM_021102|SPINT2|10653|serine peptidase inhibitor, Kunitz type, 2##BC001668|SPINT2|10653|serine peptidase inhibitor, Kunitz type, 2##AX772830|SPINT2|10653|serine peptidase inhibitor, Kunitz type, 2##AB006534|SPINT2|10653|serine peptidase inhibitor, Kunitz type, 2##BC012868|SPINT2|10653|serine peptidase inhibitor, Kunitz type, 2	0.995832	CTCF.p2:-15:0.996
chr2	178281002	178281148	reg1006755.p1	12.902	+	TSC_hg19_v1_chr2_+_178257497 AK225439 AK314259 Y09443 BC141820 AY544121 AK296239 AK316240	-23446	+	AK309714 TSC_hg19_v1_chr2_+_178257487 NM_003659	-23646	+	TSC_hg19_v1_chr2_-_178257411 BC093095 AL833088 AK126517	-23668	-	TSC_hg19_v1_chr2_-_178417525 AK296828 AK055552 BC033795 NM_152517	136410	-	TSC_hg19_v1_chr2_-_178483463 CU692122 AK057530 AK125104 BC048006	202353	-	AK292395 BC042848 NM_152275	202610	-	AK314259|AGPS|8540|alkylglycerone phosphate synthase##Y09443|AGPS|8540|alkylglycerone phosphate synthase##BC141820|AGPS|8540|alkylglycerone phosphate synthase##AY544121|AGPS|8540|alkylglycerone phosphate synthase##AK296239|AGPS|8540|alkylglycerone phosphate synthase##AK316240|AGPS|8540|alkylglycerone phosphate synthase##AK309714|AGPS|8540|alkylglycerone phosphate synthase##NM_003659|AGPS|8540|alkylglycerone phosphate synthase##AL833088|LOC100130691|100130691|uncharacterized LOC100130691##AK126517|LOC100130691|100130691|uncharacterized LOC100130691##AK296828|TTC30B|150737|tetratricopeptide repeat domain 30B##AK055552|TTC30B|150737|tetratricopeptide repeat domain 30B##BC033795|TTC30B|150737|tetratricopeptide repeat domain 30B##NM_152517|TTC30B|150737|tetratricopeptide repeat domain 30B##AK057530|TTC30A|92104|tetratricopeptide repeat domain 30A##AK125104|TTC30A|92104|tetratricopeptide repeat domain 30A##BC048006|TTC30A|92104|tetratricopeptide repeat domain 30A##AK292395|TTC30A|92104|tetratricopeptide repeat domain 30A##BC042848|TTC30A|92104|tetratricopeptide repeat domain 30A##NM_152275|TTC30A|92104|tetratricopeptide repeat domain 30A	0.728514	CTCF.p2:8:0.729
chr7	29448475	29448611	reg1006478.p1	12.902	+	U28926 AK313021 TSC_hg19_v1_chr7_+_29234428 BC112155 AK293959 AB529082 EU732759 EU732760 EU732761 EU732762 EU732763 EU732764 EU732765 EU732766	-214102	+	TSC_hg19_v1_chr7_+_29234115 NM_004067	-214420	+	AF106704 TSC_hg19_v1_chr7_-_29186093 AF282617 AK225545 BC016838 AK075433 NM_019029 NM_031311	-262430	-	NM_001039936	70942	+	TSC_hg19_v1_chr7_+_29603450 BC029131 NM_175887	154876	+	TSC_hg19_v1_chr7_+_29603500 BC018144	154988	+	U28926|CHN2|1124|chimerin (chimaerin) 2##AK313021|CHN2|1124|chimerin (chimaerin) 2##BC112155|CHN2|1124|chimerin (chimaerin) 2##AK293959|CHN2|1124|chimerin (chimaerin) 2##EU732759|CHN2|1124|chimerin (chimaerin) 2##EU732760|CHN2|1124|chimerin (chimaerin) 2##EU732761|CHN2|1124|chimerin (chimaerin) 2##EU732762|CHN2|1124|chimerin (chimaerin) 2##EU732763|CHN2|1124|chimerin (chimaerin) 2##EU732764|CHN2|1124|chimerin (chimaerin) 2##EU732765|CHN2|1124|chimerin (chimaerin) 2##EU732766|CHN2|1124|chimerin (chimaerin) 2##NM_004067|CHN2|1124|chimerin (chimaerin) 2##AF106704|CPVL|54504|carboxypeptidase, vitellogenic-like##AF282617|CPVL|54504|carboxypeptidase, vitellogenic-like##AK225545|CPVL|54504|carboxypeptidase, vitellogenic-like##BC016838|CPVL|54504|carboxypeptidase, vitellogenic-like##AK075433|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_019029|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_031311|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_001039936|CHN2|1124|chimerin (chimaerin) 2##BC029131|PRR15|222171|proline rich 15##NM_175887|PRR15|222171|proline rich 15##BC018144|PRR15|222171|proline rich 15	0.999292	CTCF.p2:25:0.999
chrX	130975533	130975677	reg1007016.p1	12.902	+	TSC_hg19_v1_chrX_-_130964633 AK097911	-10954	-	BC137050 AB529233 NM_001004486	-297607	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-552193	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	181716	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	182035	+	FJ717411 BC114371 AK125336 NM_194277	286355	-	AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4##FJ717411|FRMD7|90167|FERM domain containing 7##BC114371|FRMD7|90167|FERM domain containing 7##AK125336|FRMD7|90167|FERM domain containing 7##NM_194277|FRMD7|90167|FERM domain containing 7	0.997419	CTCF.p2:-19:0.997
chr14	23527359	23527484	reg1005839.p1	12.901	+	AK057922 BC110867 TSC_hg19_v1_chr14_-_23526749 AK307746 BX248750 BC142724 AK289576 NM_022478 NM_144985	-645	-	AK122797 NM_001099780 AB299437 AB590974	-16017	+	NM_001144932 NM_002797 NM_001130725	-23031	-	AF124727 BX247975 TSC_hg19_v1_chr14_-_23540768 AF124728	13329	-	TSC_hg19_v1_chr14_-_23540779 NM_001164816 NM_001164817	13362	-	TSC_hg19_v1_chr14_+_23563968 AK024794	36512	+	AK057922|CDH24|64403|cadherin 24, type 2##BC110867|CDH24|64403|cadherin 24, type 2##AK307746|CDH24|64403|cadherin 24, type 2##BX248750|CDH24|64403|cadherin 24, type 2##BC142724|CDH24|64403|cadherin 24, type 2##AK289576|CDH24|64403|cadherin 24, type 2##NM_022478|CDH24|64403|cadherin 24, type 2##NM_144985|CDH24|64403|cadherin 24, type 2##AK122797|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##NM_001099780|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##AB299437|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##NM_001144932|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_002797|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_001130725|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AF124727|ACIN1|22985|apoptotic chromatin condensation inducer 1##BX247975|ACIN1|22985|apoptotic chromatin condensation inducer 1##AF124728|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164816|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164817|ACIN1|22985|apoptotic chromatin condensation inducer 1##AK024794|C14orf119|55017|chromosome 14 open reading frame 119	0.999791	CTCF.p2:4:1.000
chr19	39452889	39453014	reg1006092.p1	12.901	+	AK057934 NM_148169	-9625	-	TSC_hg19_v1_chr19_+_39421608 NM_021107 NM_033363 Y11681 BC007499 BC001617	-31348	+	NM_033362	-31604	+	BC012385 AF386743 NM_024907	13383	-	CU677033 TSC_hg19_v1_chr19_-_39522905	69948	-	TSC_hg19_v1_chr19_-_39523185 BC030060 AF436061 BC014527 NM_178820	70282	-	AK057934|FBXO17|115290|F-box protein 17##NM_148169|FBXO17|115290|F-box protein 17##NM_021107|MRPS12|6183|mitochondrial ribosomal protein S12##NM_033363|MRPS12|6183|mitochondrial ribosomal protein S12##Y11681|MRPS12|6183|mitochondrial ribosomal protein S12##BC007499|MRPS12|6183|mitochondrial ribosomal protein S12##BC001617|MRPS12|6183|mitochondrial ribosomal protein S12##NM_033362|MRPS12|6183|mitochondrial ribosomal protein S12##BC012385|FBXO17|115290|F-box protein 17##AF386743|FBXO17|115290|F-box protein 17##NM_024907|FBXO17|115290|F-box protein 17##BC030060|FBXO27|126433|F-box protein 27##AF436061|FBXO27|126433|F-box protein 27##BC014527|FBXO27|126433|F-box protein 27##NM_178820|FBXO27|126433|F-box protein 27	0.968661	CTCF.p2:-23:0.969
chr11	2172772	2172915	reg1005253.p1	12.900	+	TSC_hg19_v1_chr11_-_2170792 DQ104203 NM_001007139	-2031	-	NM_001127598 TSC_hg19_v1_chr11_-_2162493	-10382	-	TSC_hg19_v1_chr11_-_2162174 HM481219 HM481220	-10643	-	AY899304 X70508 BC005255 DQ104204 DQ104205 NM_000207 NM_001042376 NM_001185097 NM_001185098	9580	-	M20911 M20912 AB591012 DQ677336 DQ677337 M17589 Y00414 M24790 NM_000360 NM_199292 NM_199293 X05290 BC143611 BC104967 BC143614	20217	-	TSC_hg19_v1_chr11_-_2291819 BC057801 BC136561 BC136567	119014	-	DQ104203|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##NM_001007139|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##NM_001127598|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##HM481219|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##HM481220|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##AY899304|INS|3630|insulin##X70508|INS|3630|insulin##BC005255|INS|3630|insulin##DQ104204|INS-IGF2|723961|INS-IGF2 readthrough##DQ104205|INS-IGF2|723961|INS-IGF2 readthrough##NM_000207|INS|3630|insulin##NM_001042376|INS-IGF2|723961|INS-IGF2 readthrough##NM_001185097|INS|3630|insulin##NM_001185098|INS|3630|insulin##M20911|TH|7054|tyrosine hydroxylase##M20912|TH|7054|tyrosine hydroxylase##DQ677336|TH|7054|tyrosine hydroxylase##DQ677337|TH|7054|tyrosine hydroxylase##M17589|TH|7054|tyrosine hydroxylase##Y00414|TH|7054|tyrosine hydroxylase##M24790|TH|7054|tyrosine hydroxylase##NM_000360|TH|7054|tyrosine hydroxylase##NM_199292|TH|7054|tyrosine hydroxylase##NM_199293|TH|7054|tyrosine hydroxylase##X05290|TH|7054|tyrosine hydroxylase##BC143611|TH|7054|tyrosine hydroxylase##BC104967|TH|7054|tyrosine hydroxylase##BC143614|TH|7054|tyrosine hydroxylase##BC057801|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136561|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136567|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)	0.97502	CTCF.p2:-2:0.975
chr22	42486964	42487073	reg1004410.p1	12.900	+	TSC_hg19_v1_chr22_-_42486777 AB528478 CU013129 CU013417 CR456529 NM_002490	-192	-	TSC_hg19_v1_chr22_-_42486764 CR456714 CR541997 CU678184 DQ892966 DQ896214 BC002772 AF047182 AK316562 AK291874	-266	-	TSC_hg19_v1_chr22_+_42475732 CR456453 CU692896 CU013003 CU013291	-11264	+	TSC_hg19_v1_chr22_+_42486980 AK123630 BC039542	8	+	AB463001 CU013213 CU013501 M20403 X08006 BC066877 BC067432 TSC_hg19_v1_chr22_-_42526809 BC106757 BC106758 BC126858 CR456430 BC075023 BC075024	39789	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	39863	-	CU013129|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CU013417|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR456529|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##NM_002490|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR456714|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR541997|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##DQ892966|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##DQ896214|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##BC002772|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##AF047182|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##AK316562|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##AK291874|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR456453|C22orf32|91689|chromosome 22 open reading frame 32##AK123630|LOC100132273|100132273|uncharacterized LOC100132273##BC039542|LOC100132273|100132273|uncharacterized LOC100132273##CU013213|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013501|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##M20403|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##X08006|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC066877|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC067432|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106757|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106758|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC126858|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CR456430|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075023|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075024|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6	0.559746	CTCF.p2:0:0.560
chr7	72294711	72294841	reg1006826.p1	12.900	+	NM_031468	-417417	-	NM_001017440 TSC_hg19_v1_chr7_-_71802376	-492472	-	AK123862 TSC_hg19_v1_chr7_-_71801809	-492998	-	AK303225 AK309556 AK301471 BC068520 AK310913 NM_001145440 NM_001145441	4006	-	TSC_hg19_v1_chr7_+_72300065 BC010183	5323	+	TSC_hg19_v1_chr7_+_72349925 AB014518 NM_172020	55159	+	NM_031468|CALN1|83698|calneuron 1##NM_001017440|CALN1|83698|calneuron 1##AK123862|CALN1|83698|calneuron 1##AK303225|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK309556|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK301471|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##BC068520|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK310913|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145440|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145441|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1##AB014518|POM121|9883|POM121 membrane glycoprotein##NM_172020|POM121|9883|POM121 membrane glycoprotein	0.998671	CTCF.p2:0:0.999
chr13	25154625	25154743	reg1005804.p1	12.898	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	-67773	-	BC040438 NM_178540 AY358145	-270967	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	-309786	+	AK292968 NM_001185085 NM_001676	99864	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	183635	+	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	342285	-	BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13##AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J	0.996435	CTCF.p2:-12:0.996
chr19	45942830	45942953	reg1003270.p1	12.898	+	TSC_hg19_v1_chr19_-_45927176 NM_001166049 NM_001983	-15716	-	TSC_hg19_v1_chr19_-_45927167 AF433652 AF001925 M13194 M28650	-15734	-	TSC_hg19_v1_chr19_-_45927109 BC008930 AB069681 AK314884	-15781	-	TSC_hg19_v1_chr19_+_45971253 EU178109 EU178110 EU178111 EU178112 EU178113 EU178114 EU178115 EU178116 L49169 NM_001114171 NM_006732 AK097324 AK225070 BC051767 BC036724 BC063042	28378	+	AF004224 TSC_hg19_v1_chr19_-_45996506 NM_206901	53602	-	TSC_hg19_v1_chr19_-_46000271 AF004222 BC014244 BC073874 AK291967 NM_005619 NM_206900	57356	-	NM_001166049|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##NM_001983|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AF433652|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AF001925|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##M13194|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##M28650|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##BC008930|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AB069681|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AK314884|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##EU178109|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178110|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178111|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178112|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178113|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178114|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178115|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178116|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##L49169|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_001114171|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_006732|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##AK225070|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##BC036724|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##BC063042|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##AF004224|RTN2|6253|reticulon 2##NM_206901|RTN2|6253|reticulon 2##AF004222|RTN2|6253|reticulon 2##BC014244|RTN2|6253|reticulon 2##BC073874|RTN2|6253|reticulon 2##AK291967|RTN2|6253|reticulon 2##NM_005619|RTN2|6253|reticulon 2##NM_206900|RTN2|6253|reticulon 2	1.023648	CTCF.p2:-4:0.998
chr4	155473392	155473505	reg1005116.p1	12.898	+	BC106004 TSC_hg19_v1_chr4_-_155471547 AK307997 AK304574 BC036046 BC020786 AK002108 NM_001201564 NM_002669	-1895	-	AK127704 NM_001142552 NM_001142553 TSC_hg19_v1_chr4_-_155412931	-60541	-	TSC_hg19_v1_chr4_-_155412411 AY354498 BC140919	-60966	-	AK312972 NM_001184741 NM_005141 AK303788 AK311683 BC106760 TSC_hg19_v1_chr4_+_155484164 BC036007 BC007030 BC020762 BC107766 BC060040 AB527849 AK309592 BC070245 J00129	10714	+	AB527957 BC098280 BC099706 BC099720 BC101935 J00127 AK290559 J00128 BC020764 BC070246 BC105803 TSC_hg19_v1_chr4_-_155511898 NM_000508 NM_021871	38420	-	TSC_hg19_v1_chr4_-_155533794 BT007081 CU675513 AB527926	60329	-	BC106004|PLRG1|5356|pleiotropic regulator 1##AK307997|PLRG1|5356|pleiotropic regulator 1##AK304574|PLRG1|5356|pleiotropic regulator 1##BC036046|PLRG1|5356|pleiotropic regulator 1##BC020786|PLRG1|5356|pleiotropic regulator 1##AK002108|PLRG1|5356|pleiotropic regulator 1##NM_001201564|PLRG1|5356|pleiotropic regulator 1##NM_002669|PLRG1|5356|pleiotropic regulator 1##AK127704|DCHS2|54798|dachsous 2 (Drosophila)##NM_001142552|DCHS2|54798|dachsous 2 (Drosophila)##NM_001142553|DCHS2|54798|dachsous 2 (Drosophila)##AY354498|DCHS2|54798|dachsous 2 (Drosophila)##BC140919|DCHS2|54798|dachsous 2 (Drosophila)##AK312972|FGB|2244|fibrinogen beta chain##NM_001184741|FGB|2244|fibrinogen beta chain##NM_005141|FGB|2244|fibrinogen beta chain##AK303788|FGB|2244|fibrinogen beta chain##AK311683|FGB|2244|fibrinogen beta chain##BC106760|FGB|2244|fibrinogen beta chain##BC036007|FGB|2244|fibrinogen beta chain##BC007030|FGB|2244|fibrinogen beta chain##BC107766|FGB|2244|fibrinogen beta chain##BC060040|FGB|2244|fibrinogen beta chain##AK309592|FGB|2244|fibrinogen beta chain##BC070245|FGB|2244|fibrinogen beta chain##J00129|FGB|2244|fibrinogen beta chain##BC098280|FGA|2243|fibrinogen alpha chain##BC099706|FGA|2243|fibrinogen alpha chain##BC099720|FGA|2243|fibrinogen alpha chain##BC101935|FGA|2243|fibrinogen alpha chain##J00127|FGA|2243|fibrinogen alpha chain##AK290559|FGA|2243|fibrinogen alpha chain##J00128|FGA|2243|fibrinogen alpha chain##BC020764|FGA|2243|fibrinogen alpha chain##BC070246|FGA|2243|fibrinogen alpha chain##BC105803|FGA|2243|fibrinogen alpha chain##NM_000508|FGA|2243|fibrinogen alpha chain##NM_021871|FGA|2243|fibrinogen alpha chain##BT007081|FGG|2266|fibrinogen gamma chain	0.917674	CTCF.p2:-3:0.918
chr2	28817289	28817407	reg1005556.p1	12.897	+	BC150633 NM_001170585 NM_153021 BC153864	-98387	+	TSC_hg19_v1_chr2_+_28616369 AK315415 X16706 AB528427 CU692714 DQ893428 DQ896743 CR542262	-200875	+	TSC_hg19_v1_chr2_+_28616346 BC022791	-200998	+	TSC_hg19_v1_chr2_+_28824770 BC042674	7435	+	TSC_hg19_v1_chr2_+_28974719 AK303682 AK295957 AK316532 NM_206876 NM_002709 BX647970 AK312329 BX647295 X80910	157326	+	TSC_hg19_v1_chr2_+_28974924 BC002697 BC012045 AB464241 AM392772 BT019744 CR542263 CR542285	157561	+	BC150633|PLB1|151056|phospholipase B1##NM_001170585|PLB1|151056|phospholipase B1##NM_153021|PLB1|151056|phospholipase B1##BC153864|PLB1|151056|phospholipase B1##AK315415|FOSL2|2355|FOS-like antigen 2##X16706|FOSL2|2355|FOS-like antigen 2##DQ893428|FOSL2|2355|FOS-like antigen 2##DQ896743|FOSL2|2355|FOS-like antigen 2##CR542262|FOSL2|2355|FOS-like antigen 2##BC022791|FOSL2|2355|FOS-like antigen 2##BC042674|PLB1|151056|phospholipase B1##AK303682|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK295957|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK316532|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_206876|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_002709|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647970|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK312329|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647295|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##X80910|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BC002697|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BC012045|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AM392772|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BT019744|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##CR542263|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##CR542285|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	0.999672	CTCF.p2:-8:1.000
chr15	90905380	90905502	reg1006131.p1	12.896	+	AK289385 NM_001004309 BC067279 CR749343	-9918	+	TSC_hg19_v1_chr15_+_90808921 AB029315 NM_001033088 AL834503 BC007222 AL360142 AK312641 BC017192 BC019023 AF242770 AL355700 BC009389 BC096824 AF225423	-96521	+	TSC_hg19_v1_chr15_+_90792763 BC036668 NM_001029964 AK127965 BC052201	-112666	+	BC151834 D29640 TSC_hg19_v1_chr15_+_90931449	26013	+	TSC_hg19_v1_chr15_+_90931479 NM_003870	26036	+	TSC_hg19_v1_chr15_+_90931499 AK304337	26053	+	AK289385|ZNF774|342132|zinc finger protein 774##NM_001004309|ZNF774|342132|zinc finger protein 774##BC067279|ZNF774|342132|zinc finger protein 774##CR749343|ZNF774|342132|zinc finger protein 774##AB029315|NGRN|51335|neugrin, neurite outgrowth associated##NM_001033088|NGRN|51335|neugrin, neurite outgrowth associated##AL834503|NGRN|51335|neugrin, neurite outgrowth associated##BC007222|NGRN|51335|neugrin, neurite outgrowth associated##AL360142|NGRN|51335|neugrin, neurite outgrowth associated##AK312641|NGRN|51335|neugrin, neurite outgrowth associated##BC017192|NGRN|51335|neugrin, neurite outgrowth associated##BC019023|NGRN|51335|neugrin, neurite outgrowth associated##AF242770|NGRN|51335|neugrin, neurite outgrowth associated##AL355700|NGRN|51335|neugrin, neurite outgrowth associated##BC009389|NGRN|51335|neugrin, neurite outgrowth associated##BC096824|NGRN|51335|neugrin, neurite outgrowth associated##AF225423|NGRN|51335|neugrin, neurite outgrowth associated##BC036668|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##NM_001029964|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##AK127965|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##BC151834|IQGAP1|8826|IQ motif containing GTPase activating protein 1##D29640|IQGAP1|8826|IQ motif containing GTPase activating protein 1##NM_003870|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK304337|IQGAP1|8826|IQ motif containing GTPase activating protein 1	0.016783	
chr15	91237015	91237157	reg1005869.p1	12.896	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-163890	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-305547	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-305580	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	23528	+	NM_002569 X17094	174798	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	190615	+	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene	0.990664	CTCF.p2:10:0.991
chr2	75103508	75103647	reg1006966.p1	12.895	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-41326	-	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	-42317	+	AF086198 NM_000189	-43796	+	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	82208	+	AK289765 NM_001058 NM_015727	323051	-	BC016157 TSC_hg19_v1_chr2_-_75788066	684470	-	AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2##AF086198|HK2|3099|hexokinase 2##NM_000189|HK2|3099|hexokinase 2##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##BC016157|FAM176A|84141|family with sequence similarity 176, member A	0.992995	CTCF.p2:16:0.993
chr8	127888953	127889088	reg1006714.p1	12.894	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-318296	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-318465	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-925607	-	DQ486513 NM_001159542	538836	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	859305	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	859470	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.94894	CTCF.p2:-15:0.949
chr12	82038463	82038579	reg1004439.p1	12.893	+	AK294505 AK297372 AK299853 NM_001220477 NM_001220478	-46467	-	AK123372 AK296380 NM_001220479 NM_001220480	-275362	-	TSC_hg19_v1_chr12_+_81471857 BC009317 BC015769 NM_024560 AK025616 AX764482	-566663	+	BC104912 BC143485 NM_001220475 NM_001220476 AK126971 TSC_hg19_v1_chr12_-_82152435 AB210009 NM_001220473 NM_001220474	113850	-	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	114588	-	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	713655	-	AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK123372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK296380|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220479|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220480|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC009317|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##BC015769|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##NM_024560|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AK025616|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AX764482|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##BC104912|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC143485|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220475|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220476|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK126971|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AB210009|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220473|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220474|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59	0.935755	CTCF.p2:-26:0.936
chr6	52128640	52128772	reg1006295.p1	12.893	+	AF384857 JF305974 AB590713 BC070124 NM_052872	-19445	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	-77500	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	-176311	-	AB528319 DQ893654 DQ895840 TSC_hg19_v1_chr6_-_52149506 AK312928 AK300754 X62153 AY032603	20785	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	20814	-	TSC_hg19_v1_chr6_-_52149551 D38073 AK299566 NM_002388 AK301704	20873	-	AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##DQ893654|MCM3|4172|minichromosome maintenance complex component 3##DQ895840|MCM3|4172|minichromosome maintenance complex component 3##AK312928|MCM3|4172|minichromosome maintenance complex component 3##AK300754|MCM3|4172|minichromosome maintenance complex component 3##X62153|MCM3|4172|minichromosome maintenance complex component 3##AY032603|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3##D38073|MCM3|4172|minichromosome maintenance complex component 3##AK299566|MCM3|4172|minichromosome maintenance complex component 3##NM_002388|MCM3|4172|minichromosome maintenance complex component 3##AK301704|MCM3|4172|minichromosome maintenance complex component 3	0.999031	CTCF.p2:3:0.999
chr16	81730962	81731075	reg1005131.p1	12.892	+	AY172689 NM_030629	-202065	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-252185	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-382368	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	81879	+	TSC_hg19_v1_chr16_+_81812901 AB208914	81884	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	81912	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	1.048865	CTCF.p2:2:0.931
chr2	57987106	57987236	reg1005429.p1	12.891	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-1574262	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-1575405	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-1575966	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	286583	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	286817	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	481311	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.999849	CTCF.p2:-24:1.000
chr11	18824301	18824440	reg1006406.p1	12.888	+	AK294374 BC064807 AK316270 AK294673 BC039897 AK295604 AK090923 AX746685 AL832541 NM_001039970 NM_006906 NM_032781 TSC_hg19_v1_chr11_-_18813404	-11105	-	BC115396 BC115397 AK095113 NM_173588	-76623	-	TSC_hg19_v1_chr11_+_18720347 BC035692 NM_153347	-104022	+	BC096835 NM_147199	132176	-	BC063450 NM_054030	257857	-	TSC_hg19_v1_chr11_+_19138714 BC050690 BC056152 NM_001001483 NM_019028 AB097014 AB097027 AK001714 BX648156 BC036020 AK291348 AB024495 CU691124	314347	+	AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC115396|IGSF22|283284|immunoglobulin superfamily, member 22##BC115397|IGSF22|283284|immunoglobulin superfamily, member 22##AK095113|IGSF22|283284|immunoglobulin superfamily, member 22##NM_173588|IGSF22|283284|immunoglobulin superfamily, member 22##BC035692|TMEM86A|144110|transmembrane protein 86A##NM_153347|TMEM86A|144110|transmembrane protein 86A##BC096835|MRGPRX1|259249|MAS-related GPR, member X1##NM_147199|MRGPRX1|259249|MAS-related GPR, member X1##BC063450|MRGPRX2|117194|MAS-related GPR, member X2##NM_054030|MRGPRX2|117194|MAS-related GPR, member X2##BC050690|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BC056152|ZDHHC13|54503|zinc finger, DHHC-type containing 13##NM_001001483|ZDHHC13|54503|zinc finger, DHHC-type containing 13##NM_019028|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB097014|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB097027|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AK001714|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BX648156|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BC036020|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AK291348|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB024495|ZDHHC13|54503|zinc finger, DHHC-type containing 13	0.562021	CTCF.p2:10:0.562
chr2	118979712	118979839	reg1006417.p1	12.888	+	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-133712	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-208042	-	TSC_hg19_v1_chr2_-_118771677 BC028609	-208091	-	NM_001426	625983	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	720045	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	936629	-	AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC028609|CCDC93|54520|coiled-coil domain containing 93##NM_001426|EN1|2019|engrailed homeobox 1##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2	0.890129	CTCF.p2:-13:0.890
chr5	79571319	79571442	reg1004087.p1	12.888	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	-19495	-	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-240216	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-284422	-	NM_032567 AK098575 AK314007 AF333098 BC033798	44435	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	132473	+	AY358256 NM_205548 BC142990 TSC_hg19_v1_chr5_+_79783828 BC131563	212453	+	BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AY358256|FAM151B|167555|family with sequence similarity 151, member B##NM_205548|FAM151B|167555|family with sequence similarity 151, member B##BC142990|FAM151B|167555|family with sequence similarity 151, member B##BC131563|FAM151B|167555|family with sequence similarity 151, member B	0.614114	CTCF.p2:15:0.614
chr7	128938226	128938358	reg1006558.p1	12.888	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	-73463	+	BC009989 NM_005631	-109580	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-243087	-	TSC_hg19_v1_chr7_+_129007981 NM_001130723	69694	+	TSC_hg19_v1_chr7_+_129008062 AK025372	69796	+	AK316073 NM_001130722	77191	+	NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2##AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2	0.985535	CTCF.p2:2:0.986
chr8	123479442	123479563	reg1005273.p1	12.888	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-825876	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1654996	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1655232	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	314409	+	BC042145 TSC_hg19_v1_chr8_+_123794000	314492	+	TSC_hg19_v1_chr8_+_123794108 AB020661	314601	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.980793	CTCF.p2:0:0.981
chr2	33598163	33598277	reg1006374.p1	12.887	+	TSC_hg19_v1_chr2_+_33359657 NM_000627 NM_001166264 NM_001166265 NM_001166266 AB208801 BC130289 BC144127 BC144128 M34057 AB384737 AF489528	-238515	+	NM_206943	-425852	+	NM_001193509 NM_017735 AK299196 BC063791 TSC_hg19_v1_chr2_+_32853177 AK027570	-745086	+	AK125551 TSC_hg19_v1_chr2_+_33661417 BC027849 NM_170672 AK292983	63228	+	NM_001139488	103100	+	TSC_hg19_v1_chr2_+_33701715 BX647990	103476	+	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1##AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1##M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1##AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_206943|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001193509|TTC27|55622|tetratricopeptide repeat domain 27##NM_017735|TTC27|55622|tetratricopeptide repeat domain 27##AK299196|TTC27|55622|tetratricopeptide repeat domain 27##BC063791|TTC27|55622|tetratricopeptide repeat domain 27##AK027570|TTC27|55622|tetratricopeptide repeat domain 27##AK125551|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC027849|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_170672|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK292983|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_001139488|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)	0.648767	CTCF.p2:-4:0.637
chr18	45973090	45973210	reg1005739.p1	12.886	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-37441	-	AM988836 AK296709 NM_001039360 EF120357	-309451	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	-515661	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	92623	+	AK131394 NM_001190823	495997	-	AK301535 NM_001190822	502552	-	AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7	0.999517	CTCF.p2:12:1.000
chr5	129188579	129188694	reg1006009.p1	12.886	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-392583	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-758211	+	TSC_hg19_v1_chr5_+_128301169 BX537383 NM_014031 NM_001017372 AK313456 AL833117	-887439	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	51851	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	1312295	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	1312354	-	AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##BX537383|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_014031|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_001017372|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AK313456|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AL833117|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1	0.999602	CTCF.p2:0:1.000
chr11	723372	723515	reg1007088.p1	12.885	+	AK027765 TSC_hg19_v1_chr11_+_722322	-1141	+	TSC_hg19_v1_chr11_+_706613 BC080636	-16818	+	TSC_hg19_v1_chr11_+_706230 NM_022772 AK025588 AK025824 AK225311 AK294041 AK222903	-17274	+	TSC_hg19_v1_chr11_+_747426 BC010103 BC009680	23982	+	TSC_hg19_v1_chr11_+_747430 L19437 NM_006755	23991	+	TSC_hg19_v1_chr11_+_747461 AK295537 AK313427 AK130060 AB528639 CU679621 BC018847	24023	+	AK027765|EPS8L2|64787|EPS8-like 2##BC080636|EPS8L2|64787|EPS8-like 2##NM_022772|EPS8L2|64787|EPS8-like 2##AK025588|EPS8L2|64787|EPS8-like 2##AK025824|EPS8L2|64787|EPS8-like 2##AK225311|EPS8L2|64787|EPS8-like 2##AK294041|EPS8L2|64787|EPS8-like 2##AK222903|EPS8L2|64787|EPS8-like 2##BC010103|TALDO1|6888|transaldolase 1##BC009680|TALDO1|6888|transaldolase 1##L19437|TALDO1|6888|transaldolase 1##NM_006755|TALDO1|6888|transaldolase 1##AK295537|TALDO1|6888|transaldolase 1##AK313427|TALDO1|6888|transaldolase 1##BC018847|TALDO1|6888|transaldolase 1	0.998154	CTCF.p2:-3:0.940
chr22	25246405	25246521	reg1005853.p1	12.885	+	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-44253	+	AB079368 NM_001008496 AK302409 AK315806	-75779	-	TSC_hg19_v1_chr22_+_25003637 NM_001032365	-242840	+	BC130647 BC130649 CR456388 NM_001001663	88849	-	BC171801 NM_001145206	177477	+	TSC_hg19_v1_chr22_+_25591072 AK025418	344666	+	NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AB079368|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001008496|PIWIL3|440822|piwi-like 3 (Drosophila)##AK302409|PIWIL3|440822|piwi-like 3 (Drosophila)##AK315806|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001032365|GGT1|2678|gamma-glutamyltransferase 1##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##AK025418|KIAA1671|85379|KIAA1671	0.763822	CTCF.p2:-19:0.764
chr1	167772670	167772826	reg1006572.p1	12.884	+	TSC_hg19_v1_chr1_+_167691226 NM_001146191 NM_003953 NM_024569 AK297112 AK075334 AK307250 AK291249 AY359019 AF181660 AF478447 BC000984 BC007881 AF095727 AF087020 AF092425 AF095726 AK315546 AB527648 AF239756 BT019542 CR542160 HQ447352	-81420	+	TSC_hg19_v1_chr1_+_167599557 AL137762 BC101536 BC101562 BC143428	-173179	+	AF545852 TSC_hg19_v1_chr1_+_167599495 NM_052862 AK130798	-173335	+	BC117366 BC117372 AF176813 AF299350 AF331033 AK310395 AK310531 AK302884 NM_001167749 NM_018417	110599	-	AB528078 AM393085 CR407632 CR533473 TSC_hg19_v1_chr1_-_167905197 BC104157 BC104158	132394	-	TSC_hg19_v1_chr1_-_167905234 AK311913 AL110297 AK290126 AK307189	132506	-	NM_001146191|MPZL1|9019|myelin protein zero-like 1##NM_003953|MPZL1|9019|myelin protein zero-like 1##NM_024569|MPZL1|9019|myelin protein zero-like 1##AK297112|MPZL1|9019|myelin protein zero-like 1##AK075334|MPZL1|9019|myelin protein zero-like 1##AK307250|MPZL1|9019|myelin protein zero-like 1##AK291249|MPZL1|9019|myelin protein zero-like 1##AY359019|MPZL1|9019|myelin protein zero-like 1##AF181660|MPZL1|9019|myelin protein zero-like 1##AF478447|MPZL1|9019|myelin protein zero-like 1##BC000984|MPZL1|9019|myelin protein zero-like 1##BC007881|MPZL1|9019|myelin protein zero-like 1##AF095727|MPZL1|9019|myelin protein zero-like 1##AF087020|MPZL1|9019|myelin protein zero-like 1##AF092425|MPZL1|9019|myelin protein zero-like 1##AF095726|MPZL1|9019|myelin protein zero-like 1##AK315546|MPZL1|9019|myelin protein zero-like 1##AF239756|MPZL1|9019|myelin protein zero-like 1##BT019542|MPZL1|9019|myelin protein zero-like 1##CR542160|MPZL1|9019|myelin protein zero-like 1##HQ447352|MPZL1|9019|myelin protein zero-like 1##AL137762|RCSD1|92241|RCSD domain containing 1##BC101536|RCSD1|92241|RCSD domain containing 1##BC101562|RCSD1|92241|RCSD domain containing 1##BC143428|RCSD1|92241|RCSD domain containing 1##AF545852|RCSD1|92241|RCSD domain containing 1##NM_052862|RCSD1|92241|RCSD domain containing 1##BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)##BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)##AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)##AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)##AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)##AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)##AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)##AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)##NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)##NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)##AM393085|BRP44|25874|brain protein 44##CR407632|BRP44|25874|brain protein 44##CR533473|BRP44|25874|brain protein 44##BC104157|BRP44|25874|brain protein 44##BC104158|BRP44|25874|brain protein 44##AK311913|BRP44|25874|brain protein 44##AL110297|BRP44|25874|brain protein 44##AK290126|BRP44|25874|brain protein 44	0.999947	CTCF.p2:10:1.000
chr8	24102611	24102745	reg1006649.p1	12.884	+	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	-390367	-	AB464642 NM_001136271	-538568	-	AB464643 AF249669 AF249670 AF249671 AF249672 EU446642 U91540 U80669 BC074863 BC074864 BC111569 BC111574 AF247704 NM_006167 TSC_hg19_v1_chr8_-_23540449	-562247	-	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	48929	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	139229	+	BC058037 AK292492 NM_003817 AF215824 CU691292 AB527100	195853	+	BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1##AB464642|NKX2-6|137814|NK2 homeobox 6##NM_001136271|NKX2-6|137814|NK2 homeobox 6##AF249669|NKX3-1|4824|NK3 homeobox 1##AF249670|NKX3-1|4824|NK3 homeobox 1##AF249671|NKX3-1|4824|NK3 homeobox 1##AF249672|NKX3-1|4824|NK3 homeobox 1##EU446642|NKX3-1|4824|NK3 homeobox 1##U91540|NKX3-1|4824|NK3 homeobox 1##U80669|NKX3-1|4824|NK3 homeobox 1##BC074863|NKX3-1|4824|NK3 homeobox 1##BC074864|NKX3-1|4824|NK3 homeobox 1##AF247704|NKX3-1|4824|NK3 homeobox 1##NM_006167|NKX3-1|4824|NK3 homeobox 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1##BC058037|ADAM7|8756|ADAM metallopeptidase domain 7##AK292492|ADAM7|8756|ADAM metallopeptidase domain 7##NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7##AF215824|ADAM7|8756|ADAM metallopeptidase domain 7	0.996356	CTCF.p2:-17:0.996
chr12	12186374	12186518	reg1004656.p2	12.883	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-383460	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-383672	+	TSC_hg19_v1_chr12_+_11802659 AK289441	-383773	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	37437	+	AF281254 AF281255 NM_030766 NM_138722	37955	+	AK074543 TSC_hg19_v1_chr12_-_12291395	104938	-	U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AK289441|ETV6|2120|ets variant 6##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6	0.998852	CTCF.p2:13:0.999
chr7	92685058	92685181	reg1005380.p1	12.883	+	TSC_hg19_v1_chr7_-_92465935 NM_001145306	-219185	-	AK313491 TSC_hg19_v1_chr7_-_92465884	-219221	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	-221899	-	AB095925 BC150249 AK122951 TSC_hg19_v1_chr7_-_92747292 BX647072 AF453311	62164	-	TSC_hg19_v1_chr7_-_92747328 BC065769 AF445355 NM_001193307 NM_017654	62207	-	AF474973 AY195582 AY195583 AY195584 AY195585 AY195586 AY195587 DQ068177 TSC_hg19_v1_chr7_-_92777683 AB095926 NM_152703	92551	-	NM_001145306|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AB095925|SAMD9|54809|sterile alpha motif domain containing 9##BC150249|SAMD9|54809|sterile alpha motif domain containing 9##AK122951|SAMD9|54809|sterile alpha motif domain containing 9##BX647072|SAMD9|54809|sterile alpha motif domain containing 9##AF453311|SAMD9|54809|sterile alpha motif domain containing 9##BC065769|SAMD9|54809|sterile alpha motif domain containing 9##AF445355|SAMD9|54809|sterile alpha motif domain containing 9##NM_001193307|SAMD9|54809|sterile alpha motif domain containing 9##NM_017654|SAMD9|54809|sterile alpha motif domain containing 9##AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like##DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like##AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like##NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like	0.372444	CTCF.p2:11:0.372
chr20	21216792	21216938	reg1003469.p2	12.882	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	-110138	+	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	-110201	+	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	-523637	-	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	67110	+	NM_033176 TSC_hg19_v1_chr20_-_21378181	161249	-	NM_002509	277798	-	BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1##DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2##NM_033176|NKX2-4|644524|NK2 homeobox 4##NM_002509|NKX2-2|4821|NK2 homeobox 2	0.934813	CTCF.p2:-1:0.935
chr6	158368344	158368455	reg1004687.p1	12.881	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	-124025	+	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	-124110	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-565860	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	34488	+	TSC_hg19_v1_chr6_+_158402923 AF318616	34520	+	TSC_hg19_v1_chr6_+_158402928 AY152396 AB384465	34610	+	AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2##AF318616|SYNJ2|8871|synaptojanin 2##AY152396|SYNJ2|8871|synaptojanin 2	0.386342	CTCF.p2:5:0.386
chr1	156577988	156578111	reg1006105.p1	12.879	+	AB528795 BC032436 TSC_hg19_v1_chr1_-_156571275 BC040147 AK125763 BC056904 AK000256 AK293026 AK301232 NM_015590 NM_182679	-6792	-	TSC_hg19_v1_chr1_+_156561594 AK316083	-16447	+	TSC_hg19_v1_chr1_+_156561567 AK294835 AK298222 BC056917 NM_144772 AJ315849 BC100931 BC100932 BC100933 BC100934	-16494	+	AB049054 NM_021817 AK294131 AK310758 AK308805 AK090712 AK308980 AK293797 BC029864	11137	+	TSC_hg19_v1_chr1_+_156611723 AY358372 NM_021948 NM_198427	33680	+	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	33905	+	BC032436|GPATCH4|54865|G patch domain containing 4##BC040147|GPATCH4|54865|G patch domain containing 4##AK125763|GPATCH4|54865|G patch domain containing 4##BC056904|GPATCH4|54865|G patch domain containing 4##AK000256|GPATCH4|54865|G patch domain containing 4##AK293026|GPATCH4|54865|G patch domain containing 4##AK301232|GPATCH4|54865|G patch domain containing 4##NM_015590|GPATCH4|54865|G patch domain containing 4##NM_182679|GPATCH4|54865|G patch domain containing 4##AK294835|APOA1BP|128240|apolipoprotein A-I binding protein##AK298222|APOA1BP|128240|apolipoprotein A-I binding protein##BC056917|APOA1BP|128240|apolipoprotein A-I binding protein##NM_144772|APOA1BP|128240|apolipoprotein A-I binding protein##AJ315849|APOA1BP|128240|apolipoprotein A-I binding protein##BC100931|APOA1BP|128240|apolipoprotein A-I binding protein##BC100932|APOA1BP|128240|apolipoprotein A-I binding protein##BC100933|APOA1BP|128240|apolipoprotein A-I binding protein##BC100934|APOA1BP|128240|apolipoprotein A-I binding protein##AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AY358372|BCAN|63827|brevican##NM_021948|BCAN|63827|brevican##NM_198427|BCAN|63827|brevican##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican	0.144538	
chr5	173000195	173000322	reg1004990.p2	12.879	+	AK095891 NM_003714	-243753	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	-244815	-	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	-244996	-	BC003114 TSC_hg19_v1_chr5_-_173043602	43339	-	TSC_hg19_v1_chr5_-_173043624 AK301982	43370	-	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	43415	-	AK095891|STC2|8614|stanniocalcin 2##NM_003714|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1	0.991802	CTCF.p2:5:0.992
chr11	8214245	8214354	reg1004453.p1	12.878	+	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	-23736	-	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-111500	+	NM_003320 U82467	-154120	+	BC069752 BC069793 M26682 NM_002315	71053	-	AK093251 AX748014 BC031231 NM_030906	401158	-	AK293193 TSC_hg19_v1_chr11_-_8615705	401404	-	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##NM_003320|TUB|7275|tubby homolog (mouse)##U82467|TUB|7275|tubby homolog (mouse)##BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33##AK293193|STK33|65975|serine/threonine kinase 33	0.999551	CTCF.p2:-4:1.000
chr5	134527161	134527289	reg1006724.p1	12.878	+	TSC_hg19_v1_chr5_-_134369891 BC009412 AK290635 NM_002653	-157316	-	CU679351 AB463996 EU446647 TSC_hg19_v1_chr5_-_134369629 U70370	-157600	-	BC110384 NM_178019 AK292427 AF432876 BC101692	-223610	+	TSC_hg19_v1_chr5_-_134734798 AF041483	207589	-	TSC_hg19_v1_chr5_-_134734891 BC095406	207663	-	TSC_hg19_v1_chr5_-_134734920 AK023409 AK296014 NM_001040158 NM_138609 NM_138610	207696	-	BC009412|PITX1|5307|paired-like homeodomain 1##AK290635|PITX1|5307|paired-like homeodomain 1##NM_002653|PITX1|5307|paired-like homeodomain 1##EU446647|PITX1|5307|paired-like homeodomain 1##U70370|PITX1|5307|paired-like homeodomain 1##BC110384|CATSPER3|347732|cation channel, sperm associated 3##NM_178019|CATSPER3|347732|cation channel, sperm associated 3##AK292427|CATSPER3|347732|cation channel, sperm associated 3##AF432876|CATSPER3|347732|cation channel, sperm associated 3##BC101692|CATSPER3|347732|cation channel, sperm associated 3##AF041483|H2AFY|9555|H2A histone family, member Y##BC095406|H2AFY|9555|H2A histone family, member Y##AK023409|H2AFY|9555|H2A histone family, member Y##AK296014|H2AFY|9555|H2A histone family, member Y##NM_001040158|H2AFY|9555|H2A histone family, member Y##NM_138609|H2AFY|9555|H2A histone family, member Y##NM_138610|H2AFY|9555|H2A histone family, member Y	0.970689	CTCF.p2:3:0.971
chr10	126736755	126736880	reg1006382.p1	12.877	+	AF222711 NM_022802	-20365	-	NM_017580	-106126	+	NM_032182 TSC_hg19_v1_chr10_+_126490387 AK296677 D63877 BC008999	-246445	+	TSC_hg19_v1_chr10_-_126849010 AF016507 BC072020	112209	-	BC052276 AL833398 BC002486 TSC_hg19_v1_chr10_-_126849101 NM_001329	112299	-	TSC_hg19_v1_chr10_-_126849600 BC047018 NM_001083914	112776	-	AF222711|CTBP2|1488|C-terminal binding protein 2##NM_022802|CTBP2|1488|C-terminal binding protein 2##NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1##NM_032182|FAM175B|23172|family with sequence similarity 175, member B##AK296677|FAM175B|23172|family with sequence similarity 175, member B##D63877|FAM175B|23172|family with sequence similarity 175, member B##BC008999|FAM175B|23172|family with sequence similarity 175, member B##AF016507|CTBP2|1488|C-terminal binding protein 2##BC072020|CTBP2|1488|C-terminal binding protein 2##BC052276|CTBP2|1488|C-terminal binding protein 2##AL833398|CTBP2|1488|C-terminal binding protein 2##BC002486|CTBP2|1488|C-terminal binding protein 2##NM_001329|CTBP2|1488|C-terminal binding protein 2##BC047018|CTBP2|1488|C-terminal binding protein 2##NM_001083914|CTBP2|1488|C-terminal binding protein 2	0.999929	CTCF.p2:4:1.000
chr18	56975838	56975967	reg1006138.p1	12.877	+	BC051901 AF115392 NM_013435 AB593018	-35248	-	TSC_hg19_v1_chr18_+_56887389 AK307264 BC004488 NM_001012512 NM_001012513 NM_002091 K02054 DQ893451 DQ896223 AB528662 AB102889 BT006803	-88459	+	TSC_hg19_v1_chr18_+_56807119 AK314107 AF212233 AK311213 NM_033280 AK295346 AK307127 BC009703 CU679449	-168755	+	EU831768 EU831846 AY286502 BC065562 BX640655 AB593158 BX648518 BC106887 BC106888 AK123184 NM_181654	9884	-	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	50584	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	388689	-	BC051901|RAX|30062|retina and anterior neural fold homeobox##AF115392|RAX|30062|retina and anterior neural fold homeobox##NM_013435|RAX|30062|retina and anterior neural fold homeobox##AB593018|RAX|30062|retina and anterior neural fold homeobox##AK307264|GRP|2922|gastrin-releasing peptide##BC004488|GRP|2922|gastrin-releasing peptide##NM_001012512|GRP|2922|gastrin-releasing peptide##NM_001012513|GRP|2922|gastrin-releasing peptide##NM_002091|GRP|2922|gastrin-releasing peptide##K02054|GRP|2922|gastrin-releasing peptide##DQ893451|GRP|2922|gastrin-releasing peptide##DQ896223|GRP|2922|gastrin-releasing peptide##AB102889|GRP|2922|gastrin-releasing peptide##BT006803|GRP|2922|gastrin-releasing peptide##AK314107|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AF212233|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##NM_033280|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK295346|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307127|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##BC009703|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##EU831768|CPLX4|339302|complexin 4##EU831846|CPLX4|339302|complexin 4##AY286502|CPLX4|339302|complexin 4##BC065562|CPLX4|339302|complexin 4##BX640655|CPLX4|339302|complexin 4##AB593158|CPLX4|339302|complexin 4##BX648518|CPLX4|339302|complexin 4##BC106887|CPLX4|339302|complexin 4##BC106888|CPLX4|339302|complexin 4##AK123184|CPLX4|339302|complexin 4##NM_181654|CPLX4|339302|complexin 4##DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1	0.988837	CTCF.p2:-3:0.989
chr17	77720085	77720192	reg1005028.p1	12.876	+	AY230663 BC041453 NM_178543 AY358622	-15249	+	NM_001082575	-241576	-	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-649108	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	31843	+	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	50769	-	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	93004	-	AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4	0.685337	CTCF.p2:-13:0.594
chr11	115860756	115860879	reg1005030.p2	12.875	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-485637	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-772169	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1311569	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	782881	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	797898	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	797921	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.917896	CTCF.p2:-12:0.918
chr18	24229810	24229936	reg1006178.p1	12.875	+	AF542549 NM_198991	-9566	-	AK289870 BC063652 TSC_hg19_v1_chr18_-_24129261 NM_001136205	-100632	-	NM_001142730 TSC_hg19_v1_chr18_-_24128518	-101363	-	U63623 NM_004028	212681	-	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	215843	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	493006	-	AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1##AK289870|KCTD1|284252|potassium channel tetramerisation domain containing 1##BC063652|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001136205|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1##U63623|AQP4|361|aquaporin 4##NM_004028|AQP4|361|aquaporin 4##AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	0.997709	CTCF.p2:-7:0.998
chr15	75566847	75566971	reg1006484.p1	12.874	+	AF263742 NM_001164404	-16011	+	TSC_hg19_v1_chr15_+_75494242 AF495726 BC011379 AK125604	-72666	+	BC110367 TSC_hg19_v1_chr15_+_75494233	-72676	+	AF263742 NM_001145224	8269	+	NM_017828 AK225716 BC033744 AK000459 AK293708 AK057145 AK124968 AK314740 BC069195 BC068998 AL136872	61485	+	NM_024608 AK026055	72460	+	AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001164404|GOLGA6C|653641|golgin A6 family, member C##AF495726|C15orf39|56905|chromosome 15 open reading frame 39##BC011379|C15orf39|56905|chromosome 15 open reading frame 39##AK125604|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001145224|GOLGA6D|653643|golgin A6 family, member D##NM_017828|COMMD4|54939|COMM domain containing 4##AK225716|COMMD4|54939|COMM domain containing 4##BC033744|COMMD4|54939|COMM domain containing 4##AK000459|COMMD4|54939|COMM domain containing 4##AK293708|COMMD4|54939|COMM domain containing 4##AK057145|COMMD4|54939|COMM domain containing 4##AK314740|COMMD4|54939|COMM domain containing 4##BC069195|COMMD4|54939|COMM domain containing 4##BC068998|COMMD4|54939|COMM domain containing 4##AL136872|COMMD4|54939|COMM domain containing 4##NM_024608|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)##AK026055|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)	0.925843	CTCF.p2:4:0.926
chr16	11065448	11065578	reg1006248.p1	12.874	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-27070	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-29278	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-29347	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	284537	-	X63758 BC096135 BC096136 BC096137 NM_005425	297625	-	NM_021247	301938	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.982384	CTCF.p2:-5:0.982
chr18	56431626	56431749	reg1004707.p1	12.874	+	TSC_hg19_v1_chr18_+_56338830 AB528440 DQ892319 DQ895521	-92842	+	TSC_hg19_v1_chr18_+_56338790 AB026118	-92890	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	-92959	+	NM_018181 AF295077 BC130618 BC130620	98432	+	TSC_hg19_v1_chr18_+_56530714 AB046849	99168	+	TSC_hg19_v1_chr18_+_56531281 BC036366	99662	+	DQ892319|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##DQ895521|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AB026118|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_018181|ZNF532|55205|zinc finger protein 532##AF295077|ZNF532|55205|zinc finger protein 532##BC130618|ZNF532|55205|zinc finger protein 532##BC130620|ZNF532|55205|zinc finger protein 532##AB046849|ZNF532|55205|zinc finger protein 532##BC036366|ZNF532|55205|zinc finger protein 532	0.922822	CTCF.p2:18:0.486	CTCF.p2:47:0.437
chr5	112714778	112714908	reg1006450.p1	12.874	+	TSC_hg19_v1_chr5_-_112630624 BC009279 BC018919 NM_002387 AK300259	-84234	-	M62397 AK096212 TSC_hg19_v1_chr5_-_112630346	-84518	-	TSC_hg19_v1_chr5_+_112312506 AY135173 AY146650 BC017965 AK296361 AK090564 AX746512 BC064593 BC068042 CU687920	-402315	+	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	55789	-	AK128596 NM_001085377	109683	-	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	134553	+	BC009279|MCC|4163|mutated in colorectal cancers##BC018919|MCC|4163|mutated in colorectal cancers##NM_002387|MCC|4163|mutated in colorectal cancers##AK300259|MCC|4163|mutated in colorectal cancers##M62397|MCC|4163|mutated in colorectal cancers##AK096212|MCC|4163|mutated in colorectal cancers##AY135173|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY146650|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC017965|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK296361|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK090564|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC064593|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC068042|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B##AK128596|MCC|4163|mutated in colorectal cancers##NM_001085377|MCC|4163|mutated in colorectal cancers##AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2	0.931013	CTCF.p2:0:0.931
chrX	43417190	43417321	reg1005976.p1	12.874	+	AB208859 AB590064 HQ258518 AY705392 AF035582 BC117311 BC143454 BC143456 AF032119 NM_001126054 NM_001126055 NM_003688 AK313399	-1634930	-	BC070180 NM_080817 AK122626 AK313702 AL832460	-1833835	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	-1868988	+	BC044787 TSC_hg19_v1_chrX_+_43514289	96968	+	TSC_hg19_v1_chrX_+_43515423 NM_000240 AK223499	98159	+	TSC_hg19_v1_chrX_+_43515457 M68840	98225	+	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##BC044787|MAOA|4128|monoamine oxidase A##NM_000240|MAOA|4128|monoamine oxidase A##AK223499|MAOA|4128|monoamine oxidase A##M68840|MAOA|4128|monoamine oxidase A	0.993453	CTCF.p2:17:0.993
chr18	23501683	23501813	reg1006271.p1	12.873	+	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	-569585	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	-569711	-	TSC_hg19_v1_chr18_-_22931121 AB385259	-570600	-	AB527567 EU832762 GQ129305 AB300354 AB300355 AB300356 AB300357 AF230662 AF244972 AF257500 AF343880 BC096221 BC096222 BC096223 BC096224 CR542088 CR542103 X79201 TSC_hg19_v1_chr18_-_23670574 AK304305 AK316302 AK316338 AK299082 AK307923 AK289510 NM_001007559 NM_005637 AK301504	168832	-	BC042820 NM_001025096 NM_001025097 NM_144662 BC025393 BC028371 BC028686 BC025389 BC047355 BC021713	212100	+	TSC_hg19_v1_chr18_+_23806444 NM_005640 AB234096	304669	+	AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##EU832762|SS18|6760|synovial sarcoma translocation, chromosome 18##GQ129305|SS18|6760|synovial sarcoma translocation, chromosome 18##AF244972|SS18|6760|synovial sarcoma translocation, chromosome 18##AF343880|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096221|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096222|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096223|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096224|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542088|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542103|SS18|6760|synovial sarcoma translocation, chromosome 18##X79201|SS18|6760|synovial sarcoma translocation, chromosome 18##AK304305|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316302|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316338|SS18|6760|synovial sarcoma translocation, chromosome 18##AK299082|SS18|6760|synovial sarcoma translocation, chromosome 18##AK307923|SS18|6760|synovial sarcoma translocation, chromosome 18##AK289510|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001007559|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_005637|SS18|6760|synovial sarcoma translocation, chromosome 18##AK301504|SS18|6760|synovial sarcoma translocation, chromosome 18##BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_005640|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##AB234096|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa	0.180342	
chr12	113634896	113635005	reg1004772.p1	12.872	+	AK075358 AK123762 AK027741 TSC_hg19_v1_chr12_+_113623525 AY007158 AK027733 NM_032848 AK222908	-11477	+	BC005848 BC001132 BC001848 AY148094 TSC_hg19_v1_chr12_-_113623279 AF478457 NM_001111322 NM_024072	-11703	-	AK308987 NM_001144872	-47346	+	TSC_hg19_v1_chr12_-_113658844 BC013151 NM_138451 AK127152	23912	-	TSC_hg19_v1_chr12_+_113659268 AK093490 AX748162 NM_001143819 NM_017901 AY083666	24293	+	AB032995 BC152423 TSC_hg19_v1_chr12_+_113659278 BC136795 BC136796	24330	+	AK075358|C12orf52|84934|chromosome 12 open reading frame 52##AK123762|C12orf52|84934|chromosome 12 open reading frame 52##AK027741|C12orf52|84934|chromosome 12 open reading frame 52##AY007158|C12orf52|84934|chromosome 12 open reading frame 52##AK027733|C12orf52|84934|chromosome 12 open reading frame 52##NM_032848|C12orf52|84934|chromosome 12 open reading frame 52##AK222908|C12orf52|84934|chromosome 12 open reading frame 52##BC005848|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##BC001132|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##BC001848|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AY148094|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AF478457|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_001111322|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_024072|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_001144872|CCDC42B|387885|coiled-coil domain containing 42B##BC013151|IQCD|115811|IQ motif containing D##NM_138451|IQCD|115811|IQ motif containing D##AK127152|IQCD|115811|IQ motif containing D##AK093490|TPCN1|53373|two pore segment channel 1##NM_001143819|TPCN1|53373|two pore segment channel 1##NM_017901|TPCN1|53373|two pore segment channel 1##AY083666|TPCN1|53373|two pore segment channel 1##AB032995|TPCN1|53373|two pore segment channel 1##BC152423|TPCN1|53373|two pore segment channel 1##BC136795|TPCN1|53373|two pore segment channel 1##BC136796|TPCN1|53373|two pore segment channel 1	0.965945	CTCF.p2:-12:0.966
chr12	66377573	66377670	reg1005701.p1	12.872	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	-158608	+	TSC_hg19_v1_chr12_+_66218605 AK311399	-159014	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	-159414	+	TSC_hg19_v1_chr12_-_66524536 BC070232 BC006002 BC107780 AK091568 AX747065 NM_032338	146904	-	AB464309 TSC_hg19_v1_chr12_-_66563773 AF182414 AF161526 BC020613 AF113127 AK301359 AF182041 AK075069 AK225158 BC070366 BC052273 BC094852	186133	-	TSC_hg19_v1_chr12_-_66563806 BC004401 NM_016056	186181	-	AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##BC070232|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC006002|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC107780|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AK091568|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##NM_032338|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AF182414|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF161526|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC020613|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF113127|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF182041|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK075069|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK225158|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC070366|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC052273|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC094852|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC004401|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##NM_016056|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4	0.997205	CTCF.p2:-1:0.997
chr16	72866587	72866704	reg1005006.p1	12.871	+	TSC_hg19_v1_chr16_+_72699031 AK021563	-167581	+	AK122925 NM_001160213	-660297	-	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	-660602	-	TSC_hg19_v1_chr16_-_72991733 BC029653	125060	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	215576	-	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	225941	-	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC029653|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3	0.025355	
chr17	78944325	78944444	reg1003365.p2	12.871	+	TSC_hg19_v1_chr17_+_78935064 BC073898	-9252	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-425566	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-425735	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	21257	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	21310	+	AK124762 TSC_hg19_v1_chr17_-_79008489 AK056555	64063	-	BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6##AK124762|FLJ90757|440465|uncharacterized LOC440465##AK056555|FLJ90757|440465|uncharacterized LOC440465	0.918575	CTCF.p2:8:0.887
chr18	864935	865041	reg1003598.p1	12.870	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-52685	-	TSC_hg19_v1_chr18_-_712601 NM_202758 X67098 X89602 AK127818 BX648215 AK295850 AK292780 AK309035 BC001285 NM_001126123 NM_017512	-152406	-	AB464497 AK289986 BC028301 NM_001012716	-206696	-	AK313050 NM_001099733	39955	+	NM_001117 BC093837 BC101803 S83513	40353	+	AK290001 BC111020 NM_022840	1706467	-	AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_202758|ENOSF1|55556|enolase superfamily member 1##X67098|ENOSF1|55556|enolase superfamily member 1##X89602|ENOSF1|55556|enolase superfamily member 1##AK127818|ENOSF1|55556|enolase superfamily member 1##BX648215|ENOSF1|55556|enolase superfamily member 1##AK295850|ENOSF1|55556|enolase superfamily member 1##AK292780|ENOSF1|55556|enolase superfamily member 1##AK309035|ENOSF1|55556|enolase superfamily member 1##BC001285|ENOSF1|55556|enolase superfamily member 1##NM_001126123|ENOSF1|55556|enolase superfamily member 1##NM_017512|ENOSF1|55556|enolase superfamily member 1##AK289986|C18orf56|494514|chromosome 18 open reading frame 56##BC028301|C18orf56|494514|chromosome 18 open reading frame 56##NM_001012716|C18orf56|494514|chromosome 18 open reading frame 56##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4	0.449028	CTCF.p2:-14:0.449
chr1	15599152	15599270	reg1005003.p1	12.869	+	AK057963 NM_052929	-25444	+	TSC_hg19_v1_chr1_+_15480249 AK001061 NM_001136218 NM_018022 BC000593 BC005177 AK098467	-118963	+	AK129922 TSC_hg19_v1_chr1_+_15479310	-119907	+	TSC_hg19_v1_chr1_+_15736390 NM_024329	137189	+	BC068473 TSC_hg19_v1_chr1_+_15736425 BC007233 BC014923 BC023611	137224	+	BC015118 CR749296 NM_007272 AK289447 BC059779 S82198	165736	+	AK057963|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##NM_052929|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##AK001061|TMEM51|55092|transmembrane protein 51##NM_001136218|TMEM51|55092|transmembrane protein 51##NM_018022|TMEM51|55092|transmembrane protein 51##BC000593|TMEM51|55092|transmembrane protein 51##BC005177|TMEM51|55092|transmembrane protein 51##AK098467|TMEM51|55092|transmembrane protein 51##AK129922|TMEM51|55092|transmembrane protein 51##NM_024329|EFHD2|79180|EF-hand domain family, member D2##BC068473|EFHD2|79180|EF-hand domain family, member D2##BC007233|EFHD2|79180|EF-hand domain family, member D2##BC014923|EFHD2|79180|EF-hand domain family, member D2##BC023611|EFHD2|79180|EF-hand domain family, member D2##BC015118|CTRC|11330|chymotrypsin C (caldecrin)##CR749296|CTRC|11330|chymotrypsin C (caldecrin)##NM_007272|CTRC|11330|chymotrypsin C (caldecrin)##AK289447|CTRC|11330|chymotrypsin C (caldecrin)##BC059779|CTRC|11330|chymotrypsin C (caldecrin)##S82198|CTRC|11330|chymotrypsin C (caldecrin)	0.976759	CTCF.p2:15:0.977
chr19	46768608	46768719	reg1005234.p1	12.868	+	AY359013 NM_198541 AY672111	-35654	+	AY358692 NM_001135113	-117164	+	AY672112 NM_001002915	-117625	+	TSC_hg19_v1_chr19_+_46800304 NM_152795 AF463492 BC026308 AB118749 AB295039 AK027725 AB527715 BC080551	31650	+	NM_022462 NM_152796 AK297828 AK304747 TSC_hg19_v1_chr19_+_46801682 AK021421 AK021653 AK024095	32997	+	AK314680 NM_152794 AB054067	38226	+	AY359013|IGFL1|374918|IGF-like family member 1##NM_198541|IGFL1|374918|IGF-like family member 1##AY672111|IGFL1|374918|IGF-like family member 1##AY358692|IGFL2|147920|IGF-like family member 2##NM_001135113|IGFL2|147920|IGF-like family member 2##AY672112|IGFL2|147920|IGF-like family member 2##NM_001002915|IGFL2|147920|IGF-like family member 2##NM_152795|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AF463492|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##BC026308|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AB118749|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AB295039|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK027725|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##BC080551|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##NM_022462|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##NM_152796|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK297828|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK304747|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK021421|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK021653|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK024095|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK314680|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##NM_152794|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AB054067|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	0.47069	CTCF.p2:26:0.471
chr2	238581820	238581927	reg1004282.p1	12.868	+	TSC_hg19_v1_chr2_+_238536229 NM_001137550 AF115510	-45514	+	BC023661 AK225423 AK022600 NM_022449	-82133	-	TSC_hg19_v1_chr2_-_238499327 BC009827 BC050426 AL136645	-82527	-	TSC_hg19_v1_chr2_+_238600798 BC018883 BC019335 NM_001137551 NM_001137552 NM_001137553 NM_004735	18934	+	TSC_hg19_v1_chr2_+_238600975 AJ223075 BC001385 AK298270 U69609 BC108913 BC108914 AK307485	19070	+	TSC_hg19_v1_chr2_+_238601052 EU832771 EU832772 GQ129315 GQ129316	19202	+	NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC023661|RAB17|64284|RAB17, member RAS oncogene family##AK225423|RAB17|64284|RAB17, member RAS oncogene family##AK022600|RAB17|64284|RAB17, member RAS oncogene family##NM_022449|RAB17|64284|RAB17, member RAS oncogene family##BC009827|RAB17|64284|RAB17, member RAS oncogene family##BC050426|RAB17|64284|RAB17, member RAS oncogene family##AL136645|RAB17|64284|RAB17, member RAS oncogene family##BC018883|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC019335|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137551|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137552|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137553|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_004735|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AJ223075|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC001385|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK298270|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##U69609|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108913|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108914|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK307485|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##EU832771|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##EU832772|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129315|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129316|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	0.315545	CTCF.p2:0:0.316
chr4	164602474	164602606	reg1006817.p1	12.867	+	AB463878 AK000675 AK301408 NM_017923	-67825	-	TSC_hg19_v1_chr4_+_164415868 BC011842	-186667	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-186698	+	NM_012403	516322	-	AK289711 NM_001166373	701866	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	1275562	+	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39	0.933794	CTCF.p2:18:0.934
chr1	144567989	144568126	reg1006926.p1	12.866	+	TSC_hg19_v1_chr1_-_144521169 AK090660 AX746564	-46828	-	TSC_hg19_v1_chr1_-_144520998 BC063535 BC021732	-47051	-	BC061517 BC073170 BC009950 BC094809 TSC_hg19_v1_chr1_-_144520932	-47126	-	TSC_hg19_v1_chr1_+_144593695 BX538005 AK308678	25641	+	AY894562 AY894567 AY894568 AY894572 AY894574 NM_001037675	46901	+	CU687328 TSC_hg19_v1_chr1_-_144931874 BC078660	363754	-	AK090660|FAM91A2|57234|family with sequence similarity 91, member A2##BC063535|LOC728855|728855|uncharacterized LOC728855##BC021732|LOC728855|728855|uncharacterized LOC728855##BC061517|LOC728855|728855|uncharacterized LOC728855##BC073170|LOC728855|728855|uncharacterized LOC728855##BC009950|LOC728855|728855|uncharacterized LOC728855##BC094809|LOC728855|728855|uncharacterized LOC728855##BX538005|NBPF10|100132406|neuroblastoma breakpoint family, member 10##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894567|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894568|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894572|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894574|NBPF9|400818|neuroblastoma breakpoint family, member 9##NM_001037675|NBPF9|400818|neuroblastoma breakpoint family, member 9##BC078660|PDE4DIP|9659|phosphodiesterase 4D interacting protein	0.031854	
chr20	19643160	19643262	reg1004098.p1	12.864	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	-449758	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	-449926	+	NM_001242671	-832373	-	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	223932	+	BC128065 NM_018993 TSC_hg19_v1_chr20_+_19870217 AB060339	227016	+	TSC_hg19_v1_chr20_+_19915762 BC034698 AL136924	272538	+	AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2##BC128065|RIN2|54453|Ras and Rab interactor 2##NM_018993|RIN2|54453|Ras and Rab interactor 2##AB060339|RIN2|54453|Ras and Rab interactor 2##BC034698|RIN2|54453|Ras and Rab interactor 2##AL136924|RIN2|54453|Ras and Rab interactor 2	0.201883	CTCF.p2:17:0.202
chr6	74801218	74801353	reg1006486.p1	12.864	+	TSC_hg19_v1_chr6_+_74406033 AY149920	-395261	+	EF553520 TSC_hg19_v1_chr6_+_74405925 AY788891 BX641095	-395365	+	TSC_hg19_v1_chr6_+_74405882 AK095888	-395414	+	BC146868 U73778 NM_004370 NM_080645 TSC_hg19_v1_chr6_-_75915745	1114370	-	TSC_hg19_v1_chr6_-_75915768 AK307558	1114495	-	CR407646 CR542125 X15822 TSC_hg19_v1_chr6_-_75953494 BC101826 BC101828 AK312154	1152194	-	AY149920|CD109|135228|CD109 molecule##EF553520|CD109|135228|CD109 molecule##AY788891|CD109|135228|CD109 molecule##BX641095|CD109|135228|CD109 molecule##AK095888|CD109|135228|CD109 molecule##BC146868|COL12A1|1303|collagen, type XII, alpha 1##U73778|COL12A1|1303|collagen, type XII, alpha 1##NM_004370|COL12A1|1303|collagen, type XII, alpha 1##NM_080645|COL12A1|1303|collagen, type XII, alpha 1##AK307558|COL12A1|1303|collagen, type XII, alpha 1##CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	0.062298	
chr7	17746501	17746639	reg1006299.p1	12.864	+	TSC_hg19_v1_chr7_+_17382906 BC021696	-363664	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	-408301	+	AY359065 BC058284 NM_176813	-824966	-	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	233479	-	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	233557	-	BC062797 BC005309 M57423 NM_175886	320895	-	BC021696|AHR|196|aryl hydrocarbon receptor##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13##AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1	0.957307	CTCF.p2:-11:0.957
chr8	120879493	120879628	reg1006314.p1	12.862	+	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	-11446	-	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	-34483	-	EU131011 DQ891628 DQ894819 D45421 L35594 AK315253 BC034961 TSC_hg19_v1_chr8_-_120651080 NM_001040092 NM_001130863 NM_006209	-228498	-	NM_022783 TSC_hg19_v1_chr8_+_120885965 AK315175 AK225168 AK297822 AL136678 AK225675 BC024746 AK022490 BC012040 AM392576 AM393333 AB527130 AK023916	6444	+	TSC_hg19_v1_chr8_+_121137341 NM_021110 Y11709 AK293080 AK307716 AK311498	257795	+	CU692406 DQ893117 DQ893487 DQ896395 AK307322 TSC_hg19_v1_chr8_-_121457370 AB049640 AF112214 BC009190	577795	-	DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##EU131011|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ891628|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ894819|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##D45421|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##L35594|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##AK315253|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC034961|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001040092|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001130863|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_006209|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein##NM_021110|COL14A1|7373|collagen, type XIV, alpha 1##Y11709|COL14A1|7373|collagen, type XIV, alpha 1##AK293080|COL14A1|7373|collagen, type XIV, alpha 1##AK307716|COL14A1|7373|collagen, type XIV, alpha 1##AK311498|COL14A1|7373|collagen, type XIV, alpha 1##DQ893117|MRPL13|28998|mitochondrial ribosomal protein L13##DQ893487|MRPL13|28998|mitochondrial ribosomal protein L13##DQ896395|MRPL13|28998|mitochondrial ribosomal protein L13##AK307322|MRPL13|28998|mitochondrial ribosomal protein L13##AB049640|MRPL13|28998|mitochondrial ribosomal protein L13##AF112214|MRPL13|28998|mitochondrial ribosomal protein L13##BC009190|MRPL13|28998|mitochondrial ribosomal protein L13	0.9809	CTCF.p2:-15:0.981
chr7	4837871	4837971	reg1004182.p1	12.861	+	TSC_hg19_v1_chr7_+_4815296 AB007875	-22635	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	-22660	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	-115670	+	DQ891226 DQ894411 AF218840 BC036653 NM_020144 TSC_hg19_v1_chr7_-_4901662 AK312788	63628	-	TSC_hg19_v1_chr7_-_4923339 AK302549 AB058752 AK294745 NM_018059	85371	-	AY424288 BC037881 BC048346 TSC_hg19_v1_chr7_-_4998841 AK094524 BC067905 NM_001100600 NM_198403	160878	-	AB007875|KIAA0415|9907|KIAA0415##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##DQ891226|PAPOLB|56903|poly(A) polymerase beta (testis specific)##DQ894411|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AF218840|PAPOLB|56903|poly(A) polymerase beta (testis specific)##BC036653|PAPOLB|56903|poly(A) polymerase beta (testis specific)##NM_020144|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AK312788|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AK302549|RADIL|55698|Ras association and DIL domains##AB058752|RADIL|55698|Ras association and DIL domains##AK294745|RADIL|55698|Ras association and DIL domains##NM_018059|RADIL|55698|Ras association and DIL domains##AY424288|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC037881|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC048346|MMD2|221938|monocyte to macrophage differentiation-associated 2##AK094524|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC067905|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_001100600|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_198403|MMD2|221938|monocyte to macrophage differentiation-associated 2	1.356256	CTCF.p2:-3:0.988	CTCF.p2:-48:0.369
chr12	110035626	110035746	reg1006686.p1	12.860	+	M88468 AB209722 TSC_hg19_v1_chr12_+_110011620 AK315678 AK293130 AK295338 BC016140	-24055	+	NM_000431 NM_001114185 TSC_hg19_v1_chr12_+_110011598	-24130	+	TSC_hg19_v1_chr12_-_110011310 BC005054 BC011831 AK295211 AK312598 NM_052845	-24365	-	NM_032829 BC020193	116501	+	TSC_hg19_v1_chr12_+_110205819 AK074806	170178	+	AB073669 AB100308 AF258465 AF263523 DQ059644 DQ059645 DQ059646 NM_001177431 AB590809 NM_001177428 NM_001177433 NM_147204 AB032427	216961	-	M88468|MVK|4598|mevalonate kinase##AB209722|MVK|4598|mevalonate kinase##AK315678|MVK|4598|mevalonate kinase##AK293130|MVK|4598|mevalonate kinase##AK295338|MVK|4598|mevalonate kinase##BC016140|MVK|4598|mevalonate kinase##NM_000431|MVK|4598|mevalonate kinase##NM_001114185|MVK|4598|mevalonate kinase##BC005054|MMAB|326625|methylmalonic aciduria (cobalamin deficiency) cblB type##BC011831|MMAB|326625|methylmalonic aciduria (cobalamin deficiency) cblB type##AK295211|MMAB|326625|methylmalonic aciduria (cobalamin deficiency) cblB type##AK312598|MMAB|326625|methylmalonic aciduria (cobalamin deficiency) cblB type##NM_052845|MMAB|326625|methylmalonic aciduria (cobalamin deficiency) cblB type##NM_032829|C12orf34|84915|chromosome 12 open reading frame 34##BC020193|C12orf34|84915|chromosome 12 open reading frame 34##AK074806|C12orf34|84915|chromosome 12 open reading frame 34##AB073669|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB100308|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AF258465|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AF263523|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059644|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059645|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059646|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177431|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177428|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177433|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_147204|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB032427|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4	0.998798	CTCF.p2:-2:0.999
chr3	129543916	129544031	reg1004785.p3	12.860	+	TSC_hg19_v1_chr3_-_129325518 NM_015103 AB014520 AY116661 BC150280	-218534	-	AY158091 NM_153833	-281917	+	NM_000539 BX537381 BC112104 BC112106 AB464154 AM392780	-296446	+	AK291448 BC039859 NM_001017395	55337	-	TSC_hg19_v1_chr3_-_129612445 NM_001128224	68445	-	TSC_hg19_v1_chr3_+_129612705 AK127796	68745	+	NM_015103|PLXND1|23129|plexin D1##AB014520|PLXND1|23129|plexin D1##AY116661|PLXND1|23129|plexin D1##BC150280|PLXND1|23129|plexin D1##AY158091|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_153833|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_000539|RHO|6010|rhodopsin##BX537381|RHO|6010|rhodopsin##BC112104|RHO|6010|rhodopsin##BC112106|RHO|6010|rhodopsin##AM392780|RHO|6010|rhodopsin##AK291448|TMCC1|23023|transmembrane and coiled-coil domain family 1##BC039859|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001017395|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001128224|TMCC1|23023|transmembrane and coiled-coil domain family 1##AK127796|LOC100507032|100507032|uncharacterized LOC100507032	0.997802	CTCF.p2:3:0.998
chr6	39315742	39315876	reg1006531.p1	12.859	+	AF358909 AY253145 AY253146 AY253147 BC111860 NM_001135105 NM_001135106 NM_001135107 NM_032115 EU978943	-25470	-	AF358910 CU693040 DQ891712 DQ894889 EU978944 BC025726 AY358853 AF339912 AK310582 AK315273 NM_031460 NM_001135111	-33644	-	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	-118569	-	BC117307 BC143444 BC143445 AK131471 NM_145027	377336	-	TSC_hg19_v1_chr6_+_39760140 AK091749 AX747160	444330	+	TSC_hg19_v1_chr6_+_39760151 AK310941 AB002379 NM_001201427 BC047575	444353	+	AF358909|KCNK16|83795|potassium channel, subfamily K, member 16##AY253145|KCNK16|83795|potassium channel, subfamily K, member 16##AY253146|KCNK16|83795|potassium channel, subfamily K, member 16##AY253147|KCNK16|83795|potassium channel, subfamily K, member 16##BC111860|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135105|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135106|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135107|KCNK16|83795|potassium channel, subfamily K, member 16##NM_032115|KCNK16|83795|potassium channel, subfamily K, member 16##EU978943|KCNK16|83795|potassium channel, subfamily K, member 16##AF358910|KCNK17|89822|potassium channel, subfamily K, member 17##DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17##DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17##EU978944|KCNK17|89822|potassium channel, subfamily K, member 17##BC025726|KCNK17|89822|potassium channel, subfamily K, member 17##AY358853|KCNK17|89822|potassium channel, subfamily K, member 17##AF339912|KCNK17|89822|potassium channel, subfamily K, member 17##AK310582|KCNK17|89822|potassium channel, subfamily K, member 17##AK315273|KCNK17|89822|potassium channel, subfamily K, member 17##NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17##NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17##AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5##BC117307|KIF6|221458|kinesin family member 6##BC143444|KIF6|221458|kinesin family member 6##BC143445|KIF6|221458|kinesin family member 6##AK131471|KIF6|221458|kinesin family member 6##NM_145027|KIF6|221458|kinesin family member 6##AK310941|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AB002379|DAAM2|23500|dishevelled associated activator of morphogenesis 2##NM_001201427|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC047575|DAAM2|23500|dishevelled associated activator of morphogenesis 2	0.998452	CTCF.p2:-15:0.998
chr14	93605628	93605755	reg1004351.p1	12.858	+	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	-23477	-	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	-24100	-	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-216094	+	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	45509	-	TSC_hg19_v1_chr14_-_93651243 NM_022151	45554	-	AK315522 TSC_hg19_v1_chr14_-_93651261	45577	-	BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1##NM_022151|MOAP1|64112|modulator of apoptosis 1##AK315522|MOAP1|64112|modulator of apoptosis 1	0.33023	CTCF.p2:7:0.330
chrX	2730599	2730712	reg1005401.p1	12.858	+	AK304164 NM_001141919 NM_001141920 NM_175569 AF380356 AF534880 BC100764 BC100765 BC100766 BC100767 Z48517 Z48518 Z48519	-60441	+	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	-121343	+	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	-311667	-	TSC_hg19_v1_chrX_+_2746813 NM_001079855 NM_001184702 NM_001184703 NM_001184704 NM_003918 U94362 AK098046 AK292496 U94363 BC023152	16247	+	AF160499 TSC_hg19_v1_chrX_-_2847338 AB590968 BC080179 BC020229	116676	-	TSC_hg19_v1_chrX_-_2847384 AK314479 AK021472 X83572 NM_001669	116733	-	AK304164|XG|7499|Xg blood group##NM_001141919|XG|7499|Xg blood group##NM_001141920|XG|7499|Xg blood group##NM_175569|XG|7499|Xg blood group##AF380356|XG|7499|Xg blood group##BC100764|XG|7499|Xg blood group##BC100765|XG|7499|Xg blood group##BC100766|XG|7499|Xg blood group##BC100767|XG|7499|Xg blood group##Z48517|XG|7499|Xg blood group##Z48518|XGPY2|100132596|Xg pseudogene, Y-linked 2##Z48519|XGPY2|100132596|Xg pseudogene, Y-linked 2##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule##BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##NM_001079855|GYG2|8908|glycogenin 2##NM_001184702|GYG2|8908|glycogenin 2##NM_001184703|GYG2|8908|glycogenin 2##NM_001184704|GYG2|8908|glycogenin 2##NM_003918|GYG2|8908|glycogenin 2##U94362|GYG2|8908|glycogenin 2##AK098046|GYG2|8908|glycogenin 2##AK292496|GYG2|8908|glycogenin 2##U94363|GYG2|8908|glycogenin 2##BC023152|GYG2|8908|glycogenin 2##AF160499|ARSD|414|arylsulfatase D##BC080179|ARSD|414|arylsulfatase D##BC020229|ARSD|414|arylsulfatase D##AK314479|ARSD|414|arylsulfatase D##AK021472|ARSD|414|arylsulfatase D##X83572|ARSD|414|arylsulfatase D##NM_001669|ARSD|414|arylsulfatase D	0.945254	CTCF.p2:-13:0.945
chr15	81558873	81558998	reg1005977.p2	12.857	+	NM_172217 AY324389	-41246	+	AK124725 NM_001172128 AK124565 AK131530	-69717	+	AK302120 BC062471 NM_173528 AK307565	-132308	+	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	30369	+	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	57559	-	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	107550	-	NM_172217|IL16|3603|interleukin 16##AY324389|IL16|3603|interleukin 16##AK124725|IL16|3603|interleukin 16##NM_001172128|IL16|3603|interleukin 16##AK124565|IL16|3603|interleukin 16##AK131530|IL16|3603|interleukin 16##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3	0.0	
chr4	155539997	155540109	reg1005616.p1	12.857	+	TSC_hg19_v1_chr4_-_155533903 NM_000509 NM_021870	-6132	-	AK290824 TSC_hg19_v1_chr4_-_155533868	-6192	-	TSC_hg19_v1_chr4_-_155533809 AK289422 BC021674 BC007044 BX538098	-6245	-	TSC_hg19_v1_chr4_+_155665114 AK292598	125065	+	TSC_hg19_v1_chr4_+_155665151 AY546085 AY546086 NM_004744 AF071510	125163	+	NM_144979 AK302720 BC028588	162409	+	NM_000509|FGG|2266|fibrinogen gamma chain##NM_021870|FGG|2266|fibrinogen gamma chain##AK290824|FGG|2266|fibrinogen gamma chain##AK289422|FGG|2266|fibrinogen gamma chain##BC021674|FGG|2266|fibrinogen gamma chain##BC007044|FGG|2266|fibrinogen gamma chain##BX538098|FGG|2266|fibrinogen gamma chain##AK292598|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AY546085|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AY546086|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_004744|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AF071510|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_144979|RBM46|166863|RNA binding motif protein 46##AK302720|RBM46|166863|RNA binding motif protein 46##BC028588|RBM46|166863|RNA binding motif protein 46	0.982498	CTCF.p2:9:0.982
chr5	73944713	73944848	reg1005297.p1	12.857	+	AK096578 NM_003633	-7532	-	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	-8317	-	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	-835430	+	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	36228	+	TSC_hg19_v1_chr5_+_73981057 AK130375 BC017378 CU675968 BT009919 M19735	36308	+	TSC_hg19_v1_chr5_-_74029248 AK126251	84492	-	AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)##AK130375|HEXB|3074|hexosaminidase B (beta polypeptide)##BC017378|HEXB|3074|hexosaminidase B (beta polypeptide)##BT009919|HEXB|3074|hexosaminidase B (beta polypeptide)##M19735|HEXB|3074|hexosaminidase B (beta polypeptide)	0.999458	CTCF.p2:27:0.999
chr9	1605075	1605212	reg1005851.p1	12.857	+	AF130729 NM_181872	-554534	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-554773	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-554799	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	410153	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	1016664	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	1016931	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.07069	
chr11	35843765	35843916	reg1002687.p2	12.856	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-159167	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-159390	+	TSC_hg19_v1_chr11_+_35684404 BC013166 NM_017583	-159467	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	121771	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	467113	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	467146	-	DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##BC013166|TRIM44|54765|tripartite motif containing 44##NM_017583|TRIM44|54765|tripartite motif containing 44##BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9	0.015371	
chr12	118275152	118275275	reg1004625.p1	12.856	+	AK294435 AF446135 EU753241 U17327 AK307481 NM_000620 NM_001204218	-475705	-	AF446136 TSC_hg19_v1_chr12_-_117799037	-476192	-	NM_001204214	-527999	-	NM_173598	130814	-	NM_001130112 NM_001206801 NM_007370 NM_181578 TSC_hg19_v1_chr12_+_118454507 AK291107 AK094575 AK290685 BC001866 BC013961 AB208992 BC020440 L07540 AB464140 CU674898 CR407651	179355	+	AK310892 TSC_hg19_v1_chr12_-_118498977 BC015887 AK298513 AF229181 NM_018639	223722	-	AK294435|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446135|NOS1|4842|nitric oxide synthase 1 (neuronal)##EU753241|NOS1|4842|nitric oxide synthase 1 (neuronal)##U17327|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK307481|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_000620|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204218|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446136|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_173598|KSR2|283455|kinase suppressor of ras 2##NM_001130112|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_001206801|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_007370|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_181578|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK291107|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK094575|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK290685|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC001866|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC013961|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AB208992|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC020440|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##L07540|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##CR407651|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK310892|WSB2|55884|WD repeat and SOCS box containing 2##BC015887|WSB2|55884|WD repeat and SOCS box containing 2##AK298513|WSB2|55884|WD repeat and SOCS box containing 2##AF229181|WSB2|55884|WD repeat and SOCS box containing 2##NM_018639|WSB2|55884|WD repeat and SOCS box containing 2	1.204483	CTCF.p2:11:0.995	CTCF.p2:39:0.209
chr1	155149208	155149329	reg1006457.p1	12.854	+	TSC_hg19_v1_chr1_+_155147069 AK308075 AK308637	-2206	+	TSC_hg19_v1_chr1_+_155146373 BC126372 BC143828 AK026882 AK225075 AK297318 NM_025058 BC069416 BC069568 AK096158 AY251386	-2885	+	AK296300 TSC_hg19_v1_chr1_+_155146298	-2984	+	AF125525 AY466157 X80761 S81781 AF348143 AY327582 AY327583 AY327584 AY327585 AY327586 AY327589 AY327590 AY327591 AY327592 AY327595 AY327597 AY327598 AY327599 AY327600 S81736 U60259 U60260 U60261 X52228 X52229 BC120974 BC120975 AY327587 AY327588 AY327596 EF583642 EF583643 EF583644 EF583645 EF583646 EF583647 EF583648 EF583649 EF583650 EF583651 EF583652 EF583653 EF583654 EF583655 EF583656 EF670706 EF670707 EF670708 EF670709 EF670710 EF670711 EF670712 EF670713 EF670714 EF670715 EF670716 EF670717 EF670718 EF670719 EF670720 EF670721 EF670722 EF670723 FJ226028 FJ226029 FJ226030 FJ226031 FJ226032 FJ226033 FJ226034 FJ226035 FJ226036 FJ226037 FJ226038 FJ226039 FJ226040 FJ226041 FJ226042 FJ226043 FJ226044 FJ226045 FJ226046 FJ226047 FJ226049 FJ226050 FJ226051 FJ226052 FJ226053 FJ226054 FJ226055 M32738 M32739 AK301575 M31823 TSC_hg19_v1_chr1_-_155162701 J05581 NM_001018016 NM_001018017 NM_001044390 NM_001044391 NM_001044392 NM_001044393 NM_001204285 NM_001204286 NM_001204287 NM_001204288 NM_001204289 NM_001204290 NM_001204291 NM_001204292 NM_001204293 NM_001204294 NM_001204295 NM_001204296 NM_001204297 NM_002456 J05582 Z17324 Z17325	13401	-	AK223278 L38969 TSC_hg19_v1_chr1_-_155177687 AK298803 BC113846 BC113847 AK298592 AK314337 NM_001252607 NM_001252608 NM_007112	28460	-	NM_002455 NM_198883 AK313863 BC001906	29270	+	AK308075|TRIM46|80128|tripartite motif containing 46##BC126372|TRIM46|80128|tripartite motif containing 46##BC143828|TRIM46|80128|tripartite motif containing 46##AK026882|TRIM46|80128|tripartite motif containing 46##AK225075|TRIM46|80128|tripartite motif containing 46##AK297318|TRIM46|80128|tripartite motif containing 46##NM_025058|TRIM46|80128|tripartite motif containing 46##BC069416|TRIM46|80128|tripartite motif containing 46##BC069568|TRIM46|80128|tripartite motif containing 46##AK096158|TRIM46|80128|tripartite motif containing 46##AY251386|TRIM46|80128|tripartite motif containing 46##AK296300|TRIM46|80128|tripartite motif containing 46##AF125525|MUC1|4582|mucin 1, cell surface associated##AY466157|MUC1|4582|mucin 1, cell surface associated##X80761|MUC1|4582|mucin 1, cell surface associated##S81781|MUC1|4582|mucin 1, cell surface associated##AF348143|MUC1|4582|mucin 1, cell surface associated##AY327582|MUC1|4582|mucin 1, cell surface associated##AY327583|MUC1|4582|mucin 1, cell surface associated##AY327584|MUC1|4582|mucin 1, cell surface associated##AY327585|MUC1|4582|mucin 1, cell surface associated##AY327586|MUC1|4582|mucin 1, cell surface associated##AY327589|MUC1|4582|mucin 1, cell surface associated##AY327590|MUC1|4582|mucin 1, cell surface associated##AY327591|MUC1|4582|mucin 1, cell surface associated##AY327592|MUC1|4582|mucin 1, cell surface associated##AY327595|MUC1|4582|mucin 1, cell surface associated##AY327597|MUC1|4582|mucin 1, cell surface associated##AY327598|MUC1|4582|mucin 1, cell surface associated##AY327599|MUC1|4582|mucin 1, cell surface associated##AY327600|MUC1|4582|mucin 1, cell surface associated##S81736|MUC1|4582|mucin 1, cell surface associated##U60259|MUC1|4582|mucin 1, cell surface associated##U60260|MUC1|4582|mucin 1, cell surface associated##U60261|MUC1|4582|mucin 1, cell surface associated##X52228|MUC1|4582|mucin 1, cell surface associated##X52229|MUC1|4582|mucin 1, cell surface associated##BC120974|MUC1|4582|mucin 1, cell surface associated##BC120975|MUC1|4582|mucin 1, cell surface associated##AY327587|MUC1|4582|mucin 1, cell surface associated##AY327588|MUC1|4582|mucin 1, cell surface associated##AY327596|MUC1|4582|mucin 1, cell surface associated##EF583642|MUC1|4582|mucin 1, cell surface associated##EF583643|MUC1|4582|mucin 1, cell surface associated##EF583644|MUC1|4582|mucin 1, cell surface associated##EF583645|MUC1|4582|mucin 1, cell surface associated##EF583646|MUC1|4582|mucin 1, cell surface associated##EF583647|MUC1|4582|mucin 1, cell surface associated##EF583648|MUC1|4582|mucin 1, cell surface associated##EF583649|MUC1|4582|mucin 1, cell surface associated##EF583650|MUC1|4582|mucin 1, cell surface associated##EF583651|MUC1|4582|mucin 1, cell surface associated##EF583652|MUC1|4582|mucin 1, cell surface associated##EF583653|MUC1|4582|mucin 1, cell surface associated##EF583654|MUC1|4582|mucin 1, cell surface associated##EF583655|MUC1|4582|mucin 1, cell surface associated##EF583656|MUC1|4582|mucin 1, cell surface associated##EF670706|MUC1|4582|mucin 1, cell surface associated##EF670707|MUC1|4582|mucin 1, cell surface associated##EF670708|MUC1|4582|mucin 1, cell surface associated##EF670709|MUC1|4582|mucin 1, cell surface associated##EF670710|MUC1|4582|mucin 1, cell surface associated##EF670711|MUC1|4582|mucin 1, cell surface associated##EF670712|MUC1|4582|mucin 1, cell surface associated##EF670713|MUC1|4582|mucin 1, cell surface associated##EF670714|MUC1|4582|mucin 1, cell surface associated##EF670715|MUC1|4582|mucin 1, cell surface associated##EF670716|MUC1|4582|mucin 1, cell surface associated##EF670717|MUC1|4582|mucin 1, cell surface associated##EF670718|MUC1|4582|mucin 1, cell surface associated##EF670719|MUC1|4582|mucin 1, cell surface associated##EF670720|MUC1|4582|mucin 1, cell surface associated##EF670721|MUC1|4582|mucin 1, cell surface associated##EF670722|MUC1|4582|mucin 1, cell surface associated##EF670723|MUC1|4582|mucin 1, cell surface associated##FJ226028|MUC1|4582|mucin 1, cell surface associated##FJ226029|MUC1|4582|mucin 1, cell surface associated##FJ226030|MUC1|4582|mucin 1, cell surface associated##FJ226031|MUC1|4582|mucin 1, cell surface associated##FJ226032|MUC1|4582|mucin 1, cell surface associated##FJ226033|MUC1|4582|mucin 1, cell surface associated##FJ226034|MUC1|4582|mucin 1, cell surface associated##FJ226035|MUC1|4582|mucin 1, cell surface associated##FJ226036|MUC1|4582|mucin 1, cell surface associated##FJ226037|MUC1|4582|mucin 1, cell surface associated##FJ226038|MUC1|4582|mucin 1, cell surface associated##FJ226039|MUC1|4582|mucin 1, cell surface associated##FJ226040|MUC1|4582|mucin 1, cell surface associated##FJ226041|MUC1|4582|mucin 1, cell surface associated##FJ226042|MUC1|4582|mucin 1, cell surface associated##FJ226043|MUC1|4582|mucin 1, cell surface associated##FJ226044|MUC1|4582|mucin 1, cell surface associated##FJ226045|MUC1|4582|mucin 1, cell surface associated##FJ226046|MUC1|4582|mucin 1, cell surface associated##FJ226047|MUC1|4582|mucin 1, cell surface associated##FJ226049|MUC1|4582|mucin 1, cell surface associated##FJ226050|MUC1|4582|mucin 1, cell surface associated##FJ226051|MUC1|4582|mucin 1, cell surface associated##FJ226052|MUC1|4582|mucin 1, cell surface associated##FJ226053|MUC1|4582|mucin 1, cell surface associated##FJ226054|MUC1|4582|mucin 1, cell surface associated##FJ226055|MUC1|4582|mucin 1, cell surface associated##M32738|MUC1|4582|mucin 1, cell surface associated##M32739|MUC1|4582|mucin 1, cell surface associated##AK301575|MUC1|4582|mucin 1, cell surface associated##M31823|MUC1|4582|mucin 1, cell surface associated##J05581|MUC1|4582|mucin 1, cell surface associated##NM_001018016|MUC1|4582|mucin 1, cell surface associated##NM_001018017|MUC1|4582|mucin 1, cell surface associated##NM_001044390|MUC1|4582|mucin 1, cell surface associated##NM_001044391|MUC1|4582|mucin 1, cell surface associated##NM_001044392|MUC1|4582|mucin 1, cell surface associated##NM_001044393|MUC1|4582|mucin 1, cell surface associated##NM_001204285|MUC1|4582|mucin 1, cell surface associated##NM_001204286|MUC1|4582|mucin 1, cell surface associated##NM_001204287|MUC1|4582|mucin 1, cell surface associated##NM_001204288|MUC1|4582|mucin 1, cell surface associated##NM_001204289|MUC1|4582|mucin 1, cell surface associated##NM_001204290|MUC1|4582|mucin 1, cell surface associated##NM_001204291|MUC1|4582|mucin 1, cell surface associated##NM_001204292|MUC1|4582|mucin 1, cell surface associated##NM_001204293|MUC1|4582|mucin 1, cell surface associated##NM_001204294|MUC1|4582|mucin 1, cell surface associated##NM_001204295|MUC1|4582|mucin 1, cell surface associated##NM_001204296|MUC1|4582|mucin 1, cell surface associated##NM_001204297|MUC1|4582|mucin 1, cell surface associated##NM_002456|MUC1|4582|mucin 1, cell surface associated##J05582|MUC1|4582|mucin 1, cell surface associated##Z17324|MUC1|4582|mucin 1, cell surface associated##Z17325|MUC1|4582|mucin 1, cell surface associated##AK223278|THBS3|7059|thrombospondin 3##L38969|THBS3|7059|thrombospondin 3##AK298803|THBS3|7059|thrombospondin 3##BC113846|THBS3|7059|thrombospondin 3##BC113847|THBS3|7059|thrombospondin 3##AK298592|THBS3|7059|thrombospondin 3##AK314337|THBS3|7059|thrombospondin 3##NM_001252607|THBS3|7059|thrombospondin 3##NM_001252608|THBS3|7059|thrombospondin 3##NM_007112|THBS3|7059|thrombospondin 3##NM_002455|MTX1|4580|metaxin 1##NM_198883|MTX1|4580|metaxin 1##AK313863|MTX1|4580|metaxin 1##BC001906|MTX1|4580|metaxin 1	1.010912	CTCF.p2:0:0.999
chr4	104986283	104986410	reg1006013.p1	12.854	+	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-345446	-	AB527246 AB209996 TSC_hg19_v1_chr4_-_104119535 AK290362 NM_001813 Z15005	-866826	-	AK128463 TSC_hg19_v1_chr4_-_104020987 AF164790 AK023323 AK290160 AK291335 AK300626 BC037277 BC095414 AY358841 BC001953 NM_020139	-965346	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	426136	-	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	429707	-	BX640738 NM_017628	1080685	+	BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##AB209996|CENPE|1062|centromere protein E, 312kDa##AK290362|CENPE|1062|centromere protein E, 312kDa##NM_001813|CENPE|1062|centromere protein E, 312kDa##Z15005|CENPE|1062|centromere protein E, 312kDa##AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##AK127778|CXXC4|80319|CXXC finger protein 4##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2	0.988004	CTCF.p2:-15:0.988
chr10	123494172	123494294	reg1006688.p1	12.853	+	X52832 U11814 M87770 M87772 AB030073 AB030074 AB030075 AB030076 AB030077 AB030078 M80634 M87771 TSC_hg19_v1_chr10_-_123357946 M35718 M97193 BC096749 AK026508 BC039243 NM_000141 NM_001144917 NM_001144918 NM_001144919 NM_022970	-136475	-	AK294026 NM_001144915	-138075	-	AK308621 NM_001144916	-140462	-	TSC_hg19_v1_chr10_-_123687547 AK296356 AF079098 AF079099 AK303604 AK313057 BC022026 NM_001001976 NM_007041	193292	-	TSC_hg19_v1_chr10_-_123687979 AK299101 AK308926	193767	-	TSC_hg19_v1_chr10_-_123734310 AK301658 AK056579	240081	-	X52832|FGFR2|2263|fibroblast growth factor receptor 2##U11814|FGFR2|2263|fibroblast growth factor receptor 2##M87770|FGFR2|2263|fibroblast growth factor receptor 2##M87772|FGFR2|2263|fibroblast growth factor receptor 2##AB030073|FGFR2|2263|fibroblast growth factor receptor 2##AB030074|FGFR2|2263|fibroblast growth factor receptor 2##AB030075|FGFR2|2263|fibroblast growth factor receptor 2##AB030076|FGFR2|2263|fibroblast growth factor receptor 2##AB030077|FGFR2|2263|fibroblast growth factor receptor 2##AB030078|FGFR2|2263|fibroblast growth factor receptor 2##M80634|FGFR2|2263|fibroblast growth factor receptor 2##M87771|FGFR2|2263|fibroblast growth factor receptor 2##M97193|FGFR2|2263|fibroblast growth factor receptor 2##BC096749|FGFR2|2263|fibroblast growth factor receptor 2##AK026508|FGFR2|2263|fibroblast growth factor receptor 2##BC039243|FGFR2|2263|fibroblast growth factor receptor 2##NM_000141|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144917|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144918|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144919|FGFR2|2263|fibroblast growth factor receptor 2##NM_022970|FGFR2|2263|fibroblast growth factor receptor 2##AK294026|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2##AK308621|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144916|FGFR2|2263|fibroblast growth factor receptor 2##AK296356|ATE1|11101|arginyltransferase 1##AF079098|ATE1|11101|arginyltransferase 1##AF079099|ATE1|11101|arginyltransferase 1##AK303604|ATE1|11101|arginyltransferase 1##AK313057|ATE1|11101|arginyltransferase 1##BC022026|ATE1|11101|arginyltransferase 1##NM_001001976|ATE1|11101|arginyltransferase 1##NM_007041|ATE1|11101|arginyltransferase 1##AK299101|ATE1|11101|arginyltransferase 1##AK308926|ATE1|11101|arginyltransferase 1##AK301658|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##AK056579|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	0.998341	CTCF.p2:2:0.998
chr1	101386778	101386924	reg1006903.p1	12.853	+	TSC_hg19_v1_chr1_+_101361700 AF233345 AB463270 AF529197 AM392927 AY094606	-25098	+	TSC_hg19_v1_chr1_+_101361675 BC064692	-25177	+	TSC_hg19_v1_chr1_+_101361651 AK313638	-25201	+	BC003660 TSC_hg19_v1_chr1_-_101491341 AK125485 BC053857 AF132964 AF157319 AF248965 AK298181 AK225469 AK225707 AK225951 AK289351 NM_001077394 NM_001077395 NM_015958 AF161492	104488	-	TSC_hg19_v1_chr1_+_101491413 BX538249	104582	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	315530	+	AF233345|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AF529197|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AM392927|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AY094606|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##BC064692|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AK313638|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AK125485|DPH5|51611|DPH5 homolog (S. cerevisiae)##BC053857|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF132964|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF157319|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF248965|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK298181|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225469|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225707|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225951|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK289351|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_001077394|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_001077395|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_015958|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF161492|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1	0.976407	CTCF.p2:-8:0.976
chr11	114131868	114131968	reg1002898.p1	12.853	+	BC026902 NM_001018011	-200661	+	NM_006006 TSC_hg19_v1_chr11_+_113930432 AB208916 BC029812	-201479	+	TSC_hg19_v1_chr11_+_113930296 BX648973	-201613	+	NM_006169	34616	+	AK026845 TSC_hg19_v1_chr11_+_114167171 U08021	35254	+	TSC_hg19_v1_chr11_+_114167214 AB590349 CR541907 DQ892841 DQ896088	35319	+	BC026902|ZBTB16|7704|zinc finger and BTB domain containing 16##NM_001018011|ZBTB16|7704|zinc finger and BTB domain containing 16##NM_006006|ZBTB16|7704|zinc finger and BTB domain containing 16##AB208916|ZBTB16|7704|zinc finger and BTB domain containing 16##BC029812|ZBTB16|7704|zinc finger and BTB domain containing 16##BX648973|ZBTB16|7704|zinc finger and BTB domain containing 16##NM_006169|NNMT|4837|nicotinamide N-methyltransferase##AK026845|NNMT|4837|nicotinamide N-methyltransferase##U08021|NNMT|4837|nicotinamide N-methyltransferase##CR541907|NNMT|4837|nicotinamide N-methyltransferase##DQ892841|NNMT|4837|nicotinamide N-methyltransferase##DQ896088|NNMT|4837|nicotinamide N-methyltransferase	0.928858	CTCF.p2:18:0.929
chr17	72787730	72787855	reg1004668.p2	12.853	+	NM_017728 AK291159 TSC_hg19_v1_chr17_+_72772637 AK296621 AK000262 AK074029 BC011552 BC037278	-15136	+	AL050269 AK225602 AK312958 BC004225 AK308569 BC004195 NM_015654 TSC_hg19_v1_chr17_-_72772477 AK123115	-15321	-	TSC_hg19_v1_chr17_+_72744928 AB528945	-42838	+	AL137521 BC037584 TSC_hg19_v1_chr17_+_72832152	44316	+	BC140801 BC144586 AB208799 NM_000835	68153	-	BT006684 CU678312 AB463633 AK223530 J03826 AK098648 AK293210 AK301779 BC063493 BC002960 AK298908 AK094120 AK293208 BC018911 BC034763 BC011521 AK295307 NM_004110 NM_024417	81319	-	NM_017728|TMEM104|54868|transmembrane protein 104##AK291159|TMEM104|54868|transmembrane protein 104##AK296621|TMEM104|54868|transmembrane protein 104##AK000262|TMEM104|54868|transmembrane protein 104##AK074029|TMEM104|54868|transmembrane protein 104##BC011552|TMEM104|54868|transmembrane protein 104##BC037278|TMEM104|54868|transmembrane protein 104##AL050269|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK225602|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK312958|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##BC004225|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK308569|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##BC004195|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##NM_015654|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK123115|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AL137521|TMEM104|54868|transmembrane protein 104##BC140801|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##BC144586|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##AB208799|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##NM_000835|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##BT006684|FDXR|2232|ferredoxin reductase##AK223530|FDXR|2232|ferredoxin reductase##J03826|FDXR|2232|ferredoxin reductase##AK098648|FDXR|2232|ferredoxin reductase##AK293210|FDXR|2232|ferredoxin reductase##AK301779|FDXR|2232|ferredoxin reductase##BC063493|FDXR|2232|ferredoxin reductase##BC002960|FDXR|2232|ferredoxin reductase##AK298908|FDXR|2232|ferredoxin reductase##AK094120|FDXR|2232|ferredoxin reductase##AK293208|FDXR|2232|ferredoxin reductase##BC018911|FDXR|2232|ferredoxin reductase##BC034763|FDXR|2232|ferredoxin reductase##BC011521|FDXR|2232|ferredoxin reductase##AK295307|FDXR|2232|ferredoxin reductase##NM_004110|FDXR|2232|ferredoxin reductase##NM_024417|FDXR|2232|ferredoxin reductase	1.972036	CTCF.p2:4:0.999	CTCF.p2:-84:0.973
chr20	30410749	30410872	reg1004754.p1	12.853	+	AJ272502 BC092413 NM_033118 BX647635	-3626	+	NM_012112 TSC_hg19_v1_chr20_+_30327092 AK312549 AB024704 AF098158 AF287265 BC020207 BC004136	-83773	+	TSC_hg19_v1_chr20_-_30311772 BX647525	-99070	-	AF042831 BT009768 AB464535 DQ896105 EU176391 BC013408 NM_004118	22559	-	NM_001012644	46990	-	NM_177991 AK091960 CU691186	47265	-	AJ272502|MYLK2|85366|myosin light chain kinase 2##BC092413|MYLK2|85366|myosin light chain kinase 2##NM_033118|MYLK2|85366|myosin light chain kinase 2##BX647635|MYLK2|85366|myosin light chain kinase 2##NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BX647525|BCL2L1|598|BCL2-like 1##AF042831|FOXS1|2307|forkhead box S1##BT009768|FOXS1|2307|forkhead box S1##DQ896105|FOXS1|2307|forkhead box S1##EU176391|FOXS1|2307|forkhead box S1##BC013408|FOXS1|2307|forkhead box S1##NM_004118|FOXS1|2307|forkhead box S1##NM_001012644|DUSP15|128853|dual specificity phosphatase 15##NM_177991|DUSP15|128853|dual specificity phosphatase 15##AK091960|DUSP15|128853|dual specificity phosphatase 15	0.993263	CTCF.p2:-25:0.993
chr2	190935163	190935281	reg1005916.p1	12.853	+	AF019627 AB527883 EU446953 BC074757 AK291524 AF104922 NM_005259	-7835	-	BC036376 TSC_hg19_v1_chr2_+_190649225 BC008410 AK295602 AK308311 BC084548 AY540751 AK297440 BC096330 BC096331 BC096332 AK316215 AK304634	-286022	+	TSC_hg19_v1_chr2_-_190649075 AK074756 NM_001128150 NM_016467	-286124	-	NM_001042521	67263	+	NM_001042520	79749	+	NM_001042519 BC005083 NM_032321 AK313395	110418	+	AF019627|MSTN|2660|myostatin##EU446953|MSTN|2660|myostatin##BC074757|MSTN|2660|myostatin##AK291524|MSTN|2660|myostatin##AF104922|MSTN|2660|myostatin##NM_005259|MSTN|2660|myostatin##BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_001042521|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042519|C2orf88|84281|chromosome 2 open reading frame 88##BC005083|C2orf88|84281|chromosome 2 open reading frame 88##NM_032321|C2orf88|84281|chromosome 2 open reading frame 88##AK313395|C2orf88|84281|chromosome 2 open reading frame 88	0.739646	CTCF.p2:4:0.740
chr11	82961142	82961284	reg1006857.p1	12.851	+	BX648690 NM_182603 DQ508815 AK095193 BC171752	-55725	+	TSC_hg19_v1_chr11_+_82904780 DQ508934 BC045621 AK310765 EF041819	-56379	+	AK311356 TSC_hg19_v1_chr11_-_82904700	-56511	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	35820	-	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	36192	-	AK299778 CR933674 NM_001142702	432238	-	BX648690|ANKRD42|338699|ankyrin repeat domain 42##NM_182603|ANKRD42|338699|ankyrin repeat domain 42##DQ508815|ANKRD42|338699|ankyrin repeat domain 42##AK095193|ANKRD42|338699|ankyrin repeat domain 42##BC171752|ANKRD42|338699|ankyrin repeat domain 42##DQ508934|ANKRD42|338699|ankyrin repeat domain 42##BC045621|ANKRD42|338699|ankyrin repeat domain 42##AK310765|ANKRD42|338699|ankyrin repeat domain 42##EF041819|ANKRD42|338699|ankyrin repeat domain 42##AK311356|DKFZp547G183|55525|uncharacterized LOC55525##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)	0.995946	CTCF.p2:15:0.996
chr5	170060120	170060260	reg1006901.p1	12.851	+	TSC_hg19_v1_chr5_+_169931023 BC035032 NM_001034837 NM_014592	-129155	+	BC025707 NM_004137 AK313979	-243543	-	TSC_hg19_v1_chr5_+_169816493 AK311026	-243694	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	150564	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	228741	+	TSC_hg19_v1_chr5_+_170289029 AJ271459 AJ288952 AJ288953 AJ288954 AJ288955 BC030953 AF222747 AB527205 AL832980	228832	+	BC035032|KCNIP1|30820|Kv channel interacting protein 1##NM_001034837|KCNIP1|30820|Kv channel interacting protein 1##NM_014592|KCNIP1|30820|Kv channel interacting protein 1##BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17##AJ271459|RANBP17|64901|RAN binding protein 17##AJ288952|RANBP17|64901|RAN binding protein 17##AJ288953|RANBP17|64901|RAN binding protein 17##AJ288954|RANBP17|64901|RAN binding protein 17##AJ288955|RANBP17|64901|RAN binding protein 17##BC030953|RANBP17|64901|RAN binding protein 17##AF222747|RANBP17|64901|RAN binding protein 17##AL832980|RANBP17|64901|RAN binding protein 17	0.961847	CTCF.p2:5:0.962
chrX	69317370	69317480	reg1005560.p1	12.851	+	AK098697 NM_207320 BC137355 BC137356	-35083	+	AB528121 AY605053 NM_001002254	-47641	-	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	-481490	+	AK054596 BC004137 NM_001551 AK315660	35914	+	TSC_hg19_v1_chrX_+_69353784 Y08915 AB528510 BT006736 CR456782 DQ892322 DQ895524	36355	+	AK129500 NM_198512	79910	+	AK098697|OTUD6A|139562|OTU domain containing 6A##NM_207320|OTUD6A|139562|OTU domain containing 6A##BC137355|OTUD6A|139562|OTU domain containing 6A##BC137356|OTUD6A|139562|OTU domain containing 6A##AY605053|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##NM_001002254|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A##AK054596|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##BC004137|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##NM_001551|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##AK315660|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##Y08915|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##BT006736|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##CR456782|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##DQ892322|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##DQ895524|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##AK129500|DGAT2L6|347516|diacylglycerol O-acyltransferase 2-like 6##NM_198512|DGAT2L6|347516|diacylglycerol O-acyltransferase 2-like 6	0.999021	CTCF.p2:0:0.999
chr13	24085263	24085397	reg1006371.p1	12.849	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-77490	-	TSC_hg19_v1_chr13_-_23949652 AK125458	-135680	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	-330215	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	59125	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	68202	+	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	377686	+	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.994473	CTCF.p2:-10:0.994
chr14	96075878	96076008	reg1005730.p1	12.848	+	TSC_hg19_v1_chr14_+_96001402 DQ083331	-74510	+	AB223038 TSC_hg19_v1_chr14_+_96001383	-74560	+	TSC_hg19_v1_chr14_+_96001362 BX248075 BC023528 BC047680	-74575	+	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	76835	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	104524	-	AK023027 TSC_hg19_v1_chr14_+_96342762	266802	+	DQ083331|GLRX5|51218|glutaredoxin 5##AB223038|GLRX5|51218|glutaredoxin 5##BX248075|GLRX5|51218|glutaredoxin 5##BC023528|GLRX5|51218|glutaredoxin 5##BC047680|GLRX5|51218|glutaredoxin 5##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##AK023027|LOC100507043|100507043|uncharacterized LOC100507043	0.410663	CTCF.p2:-15:0.411
chr21	37513860	37514010	reg1006997.p1	12.848	+	AB041012 NM_001236 AB124847 TSC_hg19_v1_chr21_+_37507383 AK223429 BC002812 AB004854 CR541709	-6586	+	TSC_hg19_v1_chr21_+_37442321 AK294142 J04056 AK308691 AK311219 BC015640 AK314879 BC002511 DQ892353 DQ895559 BT019843 CR541708	-71580	+	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	-71682	+	TSC_hg19_v1_chr21_-_37528616 AB004851 BC037580 BC047014	14696	-	AJ237839 NM_005128	22903	+	TSC_hg19_v1_chr21_+_37692548 BC058002 NM_015358 AK295133 BC007311 D50926 BC094779 BC132731 BC144116 AK292957 AB489143	178584	+	AB041012|CBR3|874|carbonyl reductase 3##NM_001236|CBR3|874|carbonyl reductase 3##AB124847|CBR3|874|carbonyl reductase 3##AK223429|CBR3|874|carbonyl reductase 3##BC002812|CBR3|874|carbonyl reductase 3##AB004854|CBR3|874|carbonyl reductase 3##CR541709|CBR3|874|carbonyl reductase 3##AK294142|CBR1|873|carbonyl reductase 1##J04056|CBR1|873|carbonyl reductase 1##AK308691|CBR1|873|carbonyl reductase 1##AK311219|CBR1|873|carbonyl reductase 1##BC015640|CBR1|873|carbonyl reductase 1##AK314879|CBR1|873|carbonyl reductase 1##BC002511|CBR1|873|carbonyl reductase 1##DQ892353|CBR1|873|carbonyl reductase 1##DQ895559|CBR1|873|carbonyl reductase 1##BT019843|CBR1|873|carbonyl reductase 1##CR541708|CBR1|873|carbonyl reductase 1##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1##AB004851|LOC100506428|100506428|uncharacterized LOC100506428##BC037580|LOC100506428|100506428|uncharacterized LOC100506428##BC047014|LOC100506428|100506428|uncharacterized LOC100506428##AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2##BC058002|MORC3|23515|MORC family CW-type zinc finger 3##NM_015358|MORC3|23515|MORC family CW-type zinc finger 3##AK295133|MORC3|23515|MORC family CW-type zinc finger 3##BC007311|MORC3|23515|MORC family CW-type zinc finger 3##D50926|MORC3|23515|MORC family CW-type zinc finger 3##BC094779|MORC3|23515|MORC family CW-type zinc finger 3##BC132731|MORC3|23515|MORC family CW-type zinc finger 3##BC144116|MORC3|23515|MORC family CW-type zinc finger 3##AK292957|MORC3|23515|MORC family CW-type zinc finger 3	1.342462	CTCF.p2:0:0.996	CTCF.p2:-85:0.347
chr1	23303040	23303178	reg1003317.p1	12.847	+	TSC_hg19_v1_chr1_+_23037331 NM_004442 NM_017449 AK299701 BC067861 AB210018 AF025304 CU686595 L36643	-265686	+	NM_000491 TSC_hg19_v1_chr1_+_22979728 BC008983	-323386	+	NM_001114101 NM_172369 AK057792 TSC_hg19_v1_chr1_+_22970125 AF087892 AK226152 BC009016 AK130613	-332922	+	NM_001242521	39233	-	TSC_hg19_v1_chr1_+_23345960 NM_001009999 NM_015013	42846	+	TSC_hg19_v1_chr1_+_23345985 AB011173 BC040194 AK290328 BC048134	42939	+	NM_004442|EPHB2|2048|EPH receptor B2##NM_017449|EPHB2|2048|EPH receptor B2##AK299701|EPHB2|2048|EPH receptor B2##BC067861|EPHB2|2048|EPH receptor B2##AB210018|EPHB2|2048|EPH receptor B2##AF025304|EPHB2|2048|EPH receptor B2##L36643|EPHB2|2048|EPH receptor B2##NM_000491|C1QB|713|complement component 1, q subcomponent, B chain##BC008983|C1QB|713|complement component 1, q subcomponent, B chain##NM_001114101|C1QC|714|complement component 1, q subcomponent, C chain##NM_172369|C1QC|714|complement component 1, q subcomponent, C chain##AK057792|C1QC|714|complement component 1, q subcomponent, C chain##AF087892|C1QC|714|complement component 1, q subcomponent, C chain##AK226152|C1QC|714|complement component 1, q subcomponent, C chain##BC009016|C1QC|714|complement component 1, q subcomponent, C chain##AK130613|C1QC|714|complement component 1, q subcomponent, C chain##NM_001242521|LOC729059|729059|uncharacterized LOC729059##NM_001009999|KDM1A|23028|lysine (K)-specific demethylase 1A##NM_015013|KDM1A|23028|lysine (K)-specific demethylase 1A##AB011173|KDM1A|23028|lysine (K)-specific demethylase 1A##BC040194|KDM1A|23028|lysine (K)-specific demethylase 1A##AK290328|KDM1A|23028|lysine (K)-specific demethylase 1A##BC048134|KDM1A|23028|lysine (K)-specific demethylase 1A	0.280948	CTCF.p2:-12:0.281
chr19	10339686	10339829	reg1005893.p3	12.847	+	TSC_hg19_v1_chr19_-_10305646 BC126227 BC144093 NM_001130823 NM_001379 AF180682 X63692	-34030	-	TSC_hg19_v1_chr19_-_10305600 BC092517	-34152	-	AB209413 TSC_hg19_v1_chr19_-_10305579	-34200	-	NM_004230 TSC_hg19_v1_chr19_-_10342058	2249	-	TSC_hg19_v1_chr19_+_10362680 NM_015956 NM_146387 NM_146388 AF132962 BC000756	22890	+	TSC_hg19_v1_chr19_+_10362889 BC009858	23141	+	BC126227|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC144093|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001130823|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001379|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##AF180682|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##X63692|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC092517|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##AB209413|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_004230|S1PR2|9294|sphingosine-1-phosphate receptor 2##NM_015956|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146387|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146388|MRPL4|51073|mitochondrial ribosomal protein L4##AF132962|MRPL4|51073|mitochondrial ribosomal protein L4##BC000756|MRPL4|51073|mitochondrial ribosomal protein L4##BC009858|MRPL4|51073|mitochondrial ribosomal protein L4	0.0	
chr10	79403877	79404022	reg1006800.p1	12.845	+	BC009695 AK098326 TSC_hg19_v1_chr10_-_79397567 BC062659 BC024965 NM_001014797 NM_001161352 NM_001161353 NM_002247	-6386	-	U13913 BC137115 BC137137 BC144496 CR627384 TSC_hg19_v1_chr10_-_79397499	-6463	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	-6543	-	TSC_hg19_v1_chr10_-_79628871 BC117695	224960	-	AB384502 NM_004747 AB011155 BC146794 TSC_hg19_v1_chr10_-_79686514	282453	-	AF021351 AY091459 AB384941 TSC_hg19_v1_chr10_-_79789272 BC041089 AK300329	385272	-	BC009695|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC062659|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC024965|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001014797|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161352|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161353|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_002247|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)##NM_004747|DLG5|9231|discs, large homolog 5 (Drosophila)##AB011155|DLG5|9231|discs, large homolog 5 (Drosophila)##BC146794|DLG5|9231|discs, large homolog 5 (Drosophila)##AF021351|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AY091459|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC041089|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AK300329|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa	0.238332	CTCF.p2:0:0.238
chr15	95802804	95802933	reg1005928.p1	12.844	+	NM_001159644 BC025708 BC111024 AK002037	-903559	+	NM_001159643 NM_018349 AY656717 BC131527	-961407	+	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	-1028010	+	TSC_hg19_v1_chr15_-_95870310 BC040875	67451	-	BC106083 NM_001145155 FM208183	1066293	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	1071109	+	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##BC040875|LOC400456|400456|uncharacterized LOC400456##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.864926	CTCF.p2:-23:0.865
chr12	70033322	70033451	reg1005943.p1	12.842	+	BC090881 NM_201550	-28445	-	AK294307 AK316408 NM_001198842 AK316397 AK302157	-53837	+	AF026293 TSC_hg19_v1_chr12_+_69979275	-54109	+	NM_152439 BC028087	49669	-	BC151138 TSC_hg19_v1_chr12_-_70093084 BC006440 AF440758 AK096459 NM_032735	59743	-	TSC_hg19_v1_chr12_+_70132676 AK314547 NM_022456 NM_175624 AJ312896 AJ312898 AJ312900 AK026201 AK225441 BC014553 BC059358	99253	+	BC090881|LRRC10|376132|leucine rich repeat containing 10##NM_201550|LRRC10|376132|leucine rich repeat containing 10##AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##NM_152439|BEST3|144453|bestrophin 3##BC028087|BEST3|144453|bestrophin 3##BC151138|BEST3|144453|bestrophin 3##BC006440|BEST3|144453|bestrophin 3##AF440758|BEST3|144453|bestrophin 3##AK096459|BEST3|144453|bestrophin 3##NM_032735|BEST3|144453|bestrophin 3##AK314547|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_022456|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_175624|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312896|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312898|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312900|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK026201|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK225441|RAB3IP|117177|RAB3A interacting protein (rabin3)##BC014553|RAB3IP|117177|RAB3A interacting protein (rabin3)##BC059358|RAB3IP|117177|RAB3A interacting protein (rabin3)	0.997288	CTCF.p2:3:0.997
chr15	76020792	76020910	reg1005437.p1	12.841	+	TSC_hg19_v1_chr15_+_76016306 BC039862 NM_175881	-4537	+	TSC_hg19_v1_chr15_-_76005190 NM_001897	-15656	-	AB462981 AY359468 X96753 TSC_hg19_v1_chr15_-_76005157	-15723	-	TSC_hg19_v1_chr15_-_76030959 AK091244	10118	-	NM_173469 TSC_hg19_v1_chr15_+_76135647 AK000617	114784	+	TSC_hg19_v1_chr15_+_76135787 BC017708 AL832429	114941	+	BC039862|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_175881|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_001897|CSPG4|1464|chondroitin sulfate proteoglycan 4##AY359468|CSPG4|1464|chondroitin sulfate proteoglycan 4##X96753|CSPG4|1464|chondroitin sulfate proteoglycan 4##AK091244|DNM1P35|100128285|DNM1 pseudogene 35##NM_173469|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK000617|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##BC017708|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AL832429|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2	0.994627	CTCF.p2:-6:0.995
chr3	100789250	100789374	reg1006777.p1	12.841	+	CU688850 EU832117 EU832211 AK025204 AL833204 BC030221 TSC_hg19_v1_chr3_-_100712327 NM_015429	-77022	-	TSC_hg19_v1_chr3_+_100428396 BC041600 BC023599	-360848	+	TSC_hg19_v1_chr3_+_100428385 BC001483 NM_001195478	-360939	+	AF173155 AB593127 NM_016247 DQ980603 DQ980602	250110	-	AM392620 AM393440 TSC_hg19_v1_chr3_-_101232029 AK297356 BC129988 BC062674 BX537943 AL833577 AF199458 NM_001077203 NM_020654	442716	-	TSC_hg19_v1_chr3_+_101280711 BC035967 AF226052 NM_017819 AK000439 AF086243 AF155111	491405	+	EU832117|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##EU832211|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AK025204|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AL833204|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##BC030221|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##NM_015429|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##BC041600|TFG|10342|TRK-fused gene##BC023599|TFG|10342|TRK-fused gene##BC001483|TFG|10342|TRK-fused gene##NM_001195478|TFG|10342|TRK-fused gene##AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AB593127|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7##AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7##AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7##BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7##AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7##AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC035967|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF226052|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##NM_017819|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AK000439|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF086243|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF155111|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1	0.999384	CTCF.p2:-7:0.999
chr8	134465689	134465815	reg1007451.p1	12.841	+	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-156255	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-262422	+	NM_001045556 NM_001045557	-350443	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	118345	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1243042	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1259327	-	AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.976236	CTCF.p2:2:0.976
chr1	118077709	118077879	reg1005438.p2	12.840	+	TSC_hg19_v1_chr1_+_117910083 BC052954 AK307842 NM_006699 BC063300	-167701	+	AY280972 DQ103757 AB590614 BC074729 AY346100 AY358352 AK026071 AK225413 AK310812 AY442303 BC065717 BX648021 DQ836392 NM_001253850 NM_024626	-324266	-	AK303466 NM_001253849	-331337	-	TSC_hg19_v1_chr1_+_118148542 NM_017709	70792	+	TSC_hg19_v1_chr1_+_118148669 AK000209 BC036516 BC131726	70885	+	TSC_hg19_v1_chr1_-_118472186 BC013132	394388	-	BC052954|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##AK307842|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##NM_006699|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC063300|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##AY280972|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ103757|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC074729|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY346100|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY358352|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK026071|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK225413|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK310812|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY442303|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC065717|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BX648021|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ836392|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253850|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_024626|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK303466|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253849|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_017709|FAM46C|54855|family with sequence similarity 46, member C##AK000209|FAM46C|54855|family with sequence similarity 46, member C##BC036516|FAM46C|54855|family with sequence similarity 46, member C##BC131726|FAM46C|54855|family with sequence similarity 46, member C##BC013132|GDAP2|54834|ganglioside induced differentiation associated protein 2	0.999904	CTCF.p2:8:1.000
chr14	70051834	70051935	reg1004397.p1	12.840	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	-100404	+	TSC_hg19_v1_chr14_+_69865419 BC047682	-186448	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	-186489	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	26426	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	26507	+	TSC_hg19_v1_chr14_+_70233809 BX640605	181922	+	AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC047682|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##D87434|KIAA0247|9766|KIAA0247##BX640605|SRSF5|6430|serine/arginine-rich splicing factor 5	0.991134	CTCF.p2:4:0.991
chr3	43811049	43811164	reg1004529.p2	12.840	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-78685	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-147593	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-147668	-	AK093476 AX748152 NM_001145030	472271	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	568524	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	568841	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.997569	CTCF.p2:4:0.998
chr3	14245083	14245210	reg1006495.p1	12.839	+	TSC_hg19_v1_chr3_+_14220355 AJ238095 AB463841 CR457185	-24795	+	TSC_hg19_v1_chr3_+_14220336 AF182418 AF182289 BC007055 AK312189	-24812	+	NM_014463 TSC_hg19_v1_chr3_+_14220319	-24872	+	TSC_hg19_v1_chr3_+_14444072 AK303649	198923	+	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	198970	+	NM_001080423	338441	-	AJ238095|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##CR457185|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182418|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182289|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC007055|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312189|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_014463|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2	0.857681	CTCF.p2:-10:0.858
chr18	29302442	29302570	reg1005724.p1	12.838	+	AB024742 BC074835 BC074884 BC069620 BC069642 AF069054 AK314860 AF097159 NM_004775	-37967	-	NM_000371 TSC_hg19_v1_chr18_+_29171839 AK312051 BC005310 BC020791 D00096 GU727633 K02091 M10605 X59498 AF162690 BT007189 CR456908 DQ778081 DQ839490 U19780	-130709	+	NM_001943 TSC_hg19_v1_chr18_+_29078205 BC099655 BC099656 BC099657 Z26317 AK308408	-224363	+	BC103999 BC104000 BC104001 AK302337 NM_001034172	38264	-	BC127109 BC127110 TSC_hg19_v1_chr18_-_29523061	220518	-	TSC_hg19_v1_chr18_-_29523064 BC059380 AK292537	220561	-	AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##NM_000371|TTR|7276|transthyretin##AK312051|TTR|7276|transthyretin##BC005310|TTR|7276|transthyretin##BC020791|TTR|7276|transthyretin##D00096|TTR|7276|transthyretin##GU727633|TTR|7276|transthyretin##K02091|TTR|7276|transthyretin##M10605|TTR|7276|transthyretin##X59498|TTR|7276|transthyretin##AF162690|TTR|7276|transthyretin##BT007189|TTR|7276|transthyretin##CR456908|TTR|7276|transthyretin##DQ839490|TTR|7276|transthyretin##U19780|TTR|7276|transthyretin##NM_001943|DSG2|1829|desmoglein 2##BC099655|DSG2|1829|desmoglein 2##BC099656|DSG2|1829|desmoglein 2##BC099657|DSG2|1829|desmoglein 2##Z26317|DSG2|1829|desmoglein 2##AK308408|DSG2|1829|desmoglein 2##BC103999|MCART2|147407|mitochondrial carrier triple repeat 2##BC104000|MCART2|147407|mitochondrial carrier triple repeat 2##BC104001|MCART2|147407|mitochondrial carrier triple repeat 2##AK302337|MCART2|147407|mitochondrial carrier triple repeat 2##NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2##BC127109|TRAPPC8|22878|trafficking protein particle complex 8##BC127110|TRAPPC8|22878|trafficking protein particle complex 8##BC059380|TRAPPC8|22878|trafficking protein particle complex 8##AK292537|TRAPPC8|22878|trafficking protein particle complex 8	0.989496	CTCF.p2:15:0.989
chr4	40929821	40929943	reg1003081.p1	12.838	+	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-70707	-	BC042401 NM_024677 BC036568 AK024063	-177936	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-297175	-	BC088372 TSC_hg19_v1_chr4_-_40936716	6796	-	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	286687	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	329014	+	AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK304206|RBM47|54502|RNA binding motif protein 47##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.9996	CTCF.p2:-41:1.000
chr1	112050958	112051098	reg1005421.p2	12.837	+	NM_000677 NM_020683	-4286	-	TSC_hg19_v1_chr1_+_112016601 BC017973 NM_174896	-34430	+	TSC_hg19_v1_chr1_+_111992132 X60221	-58874	+	BC041707 BC064411 NM_001081976	55551	-	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	111439	+	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	230927	-	NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##BC017973|C1orf162|128346|chromosome 1 open reading frame 162##NM_174896|C1orf162|128346|chromosome 1 open reading frame 162##X60221|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1##BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B	0.999488	CTCF.p2:-12:0.999
chr8	73759500	73759634	reg1006265.p1	12.836	+	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	-309924	+	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	-771733	-	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-1002859	-	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	161545	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	245875	-	BC150551 BC150552 NM_001243237	412169	-	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84##BC150551|LOC100130301|100130301|uncharacterized LOC100130301##BC150552|LOC100130301|100130301|uncharacterized LOC100130301##NM_001243237|LOC100130301|100130301|uncharacterized LOC100130301	0.979327	CTCF.p2:10:0.979
chr12	125667826	125667949	reg1006429.p1	12.835	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-117819	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-117946	+	TSC_hg19_v1_chr12_+_125478249 AF284094	-189627	+	NM_052907	143274	+	NM_001136103	3084060	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	3640556	-	AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##AF284094|BRI3BP|140707|BRI3 binding protein##NM_052907|TMEM132B|114795|transmembrane protein 132B##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4	0.951247	CTCF.p2:-9:0.951
chr1	36192569	36192701	reg1006775.p1	12.833	+	TSC_hg19_v1_chr1_-_36184816 AK096303 NM_152374	-7844	-	TSC_hg19_v1_chr1_-_36184424 BC026909 AK294352	-8223	-	NM_002794	-85191	-	TSC_hg19_v1_chr1_-_36235569 BC113116 BC115023 BC115024 BC115025 BC115026 BC115027 BC137279 BC140789 AF297866 NM_001190481 NM_022111 BC038991 BC018670 BC062215 AK308193	42880	-	TSC_hg19_v1_chr1_+_36273802 AB046787 BC152450 NM_017629	81185	+	TSC_hg19_v1_chr1_+_36348795 AF093097 NM_012199	156168	+	AK096303|C1orf216|127703|chromosome 1 open reading frame 216##NM_152374|C1orf216|127703|chromosome 1 open reading frame 216##BC026909|C1orf216|127703|chromosome 1 open reading frame 216##AK294352|C1orf216|127703|chromosome 1 open reading frame 216##NM_002794|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC113116|CLSPN|63967|claspin##BC115023|CLSPN|63967|claspin##BC115024|CLSPN|63967|claspin##BC115025|CLSPN|63967|claspin##BC115026|CLSPN|63967|claspin##BC115027|CLSPN|63967|claspin##BC137279|CLSPN|63967|claspin##BC140789|CLSPN|63967|claspin##AF297866|CLSPN|63967|claspin##NM_001190481|CLSPN|63967|claspin##NM_022111|CLSPN|63967|claspin##BC038991|CLSPN|63967|claspin##BC018670|CLSPN|63967|claspin##BC062215|CLSPN|63967|claspin##AK308193|CLSPN|63967|claspin##AB046787|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4##BC152450|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4##NM_017629|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4##AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1##NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1	0.999789	CTCF.p2:-4:1.000
chr5	133481656	133481772	reg1005180.p2	12.833	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	-30353	+	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	-31195	+	AK095989 NM_003374	-140891	-	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	30909	-	TSC_hg19_v1_chr5_-_133512642 Z47087 BC020798 NM_006930 NM_170679	30968	-	AB451240 AB451365 CR457417 AB385080 X12646 TSC_hg19_v1_chr5_-_133561733 J03804	79930	-	NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1##Z47087|SKP1|6500|S-phase kinase-associated protein 1##BC020798|SKP1|6500|S-phase kinase-associated protein 1##NM_006930|SKP1|6500|S-phase kinase-associated protein 1##NM_170679|SKP1|6500|S-phase kinase-associated protein 1##AB451240|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AB451365|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##CR457417|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##X12646|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##J03804|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme	0.962947	CTCF.p2:-5:0.963
chr7	134291175	134291318	reg1007280.p1	12.833	+	NM_001080538	-57398	+	AF524864 NM_020299 BC008837	-78876	+	TSC_hg19_v1_chr7_-_134143878 AK313439 BC000260 NM_001628 AK311339	-147282	-	NM_001724 NM_199186 TSC_hg19_v1_chr7_+_134331586 BC017050 AK315439 AK097778 X04327	40339	+	TSC_hg19_v1_chr7_+_134464170 NM_004342 NM_033138 NM_033157 AK289686	172920	+	TSC_hg19_v1_chr7_+_134464387 AK298524 AK304729 AF247820 M83216	173143	+	NM_001080538|AKR1B15|441282|aldo-keto reductase family 1, member B15##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##AK313439|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC000260|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001628|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK311339|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001724|BPGM|669|2,3-bisphosphoglycerate mutase##NM_199186|BPGM|669|2,3-bisphosphoglycerate mutase##BC017050|BPGM|669|2,3-bisphosphoglycerate mutase##AK315439|BPGM|669|2,3-bisphosphoglycerate mutase##AK097778|BPGM|669|2,3-bisphosphoglycerate mutase##X04327|BPGM|669|2,3-bisphosphoglycerate mutase##NM_004342|CALD1|800|caldesmon 1##NM_033138|CALD1|800|caldesmon 1##NM_033157|CALD1|800|caldesmon 1##AK289686|CALD1|800|caldesmon 1##AK298524|CALD1|800|caldesmon 1##AK304729|CALD1|800|caldesmon 1##AF247820|CALD1|800|caldesmon 1##M83216|CALD1|800|caldesmon 1	0.999171	CTCF.p2:17:0.999
chr7	98910648	98910764	reg1004650.p1	12.833	+	EU126604 NM_001145715	-105618	-	TSC_hg19_v1_chr7_-_98741752 AB046845 BC152468 NM_001199847 NM_020429 NM_181349	-168957	-	TSC_hg19_v1_chr7_-_98741637 BC136804 BC144414	-169076	-	NM_001190996 NM_006409 TSC_hg19_v1_chr7_+_98923532 AK297111 BC039594 BC006445 AB209059 BC047889 BC054027	12834	+	TSC_hg19_v1_chr7_+_98972300 NM_005720	61588	+	TSC_hg19_v1_chr7_+_98972332 BC002988 AF006084	61630	+	EU126604|KPNA7|402569|karyopherin alpha 7 (importin alpha 8)##NM_001145715|KPNA7|402569|karyopherin alpha 7 (importin alpha 8)##AB046845|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##BC152468|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##NM_001199847|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##NM_020429|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##NM_181349|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##BC136804|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##BC144414|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##NM_001190996|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##NM_006409|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##BC039594|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##BC006445|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##AB209059|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##BC047889|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##BC054027|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##NM_005720|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##BC002988|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##AF006084|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa	0.999786	CTCF.p2:6:1.000
chr1	15757721	15757876	reg1006239.p1	12.832	+	BC068473 TSC_hg19_v1_chr1_+_15736425 BC007233 BC014923 BC023611	-21363	+	TSC_hg19_v1_chr1_+_15736390 NM_024329	-21398	+	AK057963 NM_052929	-184031	+	BC015118 CR749296 NM_007272 AK289447 BC059779 S82198	7149	+	NM_033440 BC007031 BC069331 BC069432 M16652 AK312198 M16631 D00236 CR450291	25437	+	BC069412 BC069455 M16653 NM_015849 BC113540 BC113542 BC171735 HQ258147	44807	+	BC068473|EFHD2|79180|EF-hand domain family, member D2##BC007233|EFHD2|79180|EF-hand domain family, member D2##BC014923|EFHD2|79180|EF-hand domain family, member D2##BC023611|EFHD2|79180|EF-hand domain family, member D2##NM_024329|EFHD2|79180|EF-hand domain family, member D2##AK057963|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##NM_052929|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##BC015118|CTRC|11330|chymotrypsin C (caldecrin)##CR749296|CTRC|11330|chymotrypsin C (caldecrin)##NM_007272|CTRC|11330|chymotrypsin C (caldecrin)##AK289447|CTRC|11330|chymotrypsin C (caldecrin)##BC059779|CTRC|11330|chymotrypsin C (caldecrin)##S82198|CTRC|11330|chymotrypsin C (caldecrin)##NM_033440|CELA2A|63036|chymotrypsin-like elastase family, member 2A##BC007031|CELA2A|63036|chymotrypsin-like elastase family, member 2A##BC069331|CELA2A|63036|chymotrypsin-like elastase family, member 2A##BC069432|CELA2A|63036|chymotrypsin-like elastase family, member 2A##M16652|CELA2A|63036|chymotrypsin-like elastase family, member 2A##AK312198|CELA2A|63036|chymotrypsin-like elastase family, member 2A##M16631|CELA2A|63036|chymotrypsin-like elastase family, member 2A##D00236|CELA2A|63036|chymotrypsin-like elastase family, member 2A##CR450291|CELA2A|63036|chymotrypsin-like elastase family, member 2A##BC069412|CELA2B|51032|chymotrypsin-like elastase family, member 2B##BC069455|CELA2B|51032|chymotrypsin-like elastase family, member 2B##M16653|CELA2B|51032|chymotrypsin-like elastase family, member 2B##NM_015849|CELA2B|51032|chymotrypsin-like elastase family, member 2B##BC113540|CELA2B|51032|chymotrypsin-like elastase family, member 2B##BC113542|CELA2B|51032|chymotrypsin-like elastase family, member 2B##BC171735|CELA2B|51032|chymotrypsin-like elastase family, member 2B##HQ258147|CELA2B|51032|chymotrypsin-like elastase family, member 2B	0.996095	CTCF.p2:16:0.996
chr16	66440497	66440612	reg1006001.p1	12.832	+	AK300461 TSC_hg19_v1_chr16_+_66400593 X59796 AK300299 AB209908 AB035304 BC096363 BC096364 BC096365 BC117520	-39952	+	TSC_hg19_v1_chr16_+_66400559 U84722	-39994	+	NM_001795 TSC_hg19_v1_chr16_+_66400538	-40021	+	NM_001136106 NM_001178020 NM_001197224 NM_001197225 TSC_hg19_v1_chr16_+_66460907	20307	+	AB472397 TSC_hg19_v1_chr16_-_66551118	110557	-	TSC_hg19_v1_chr16_-_66583778 U80628 AK302976	143129	-	AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##NM_001136106|BEAN1|146227|brain expressed, associated with NEDD4, 1##NM_001178020|BEAN1|146227|brain expressed, associated with NEDD4, 1##NM_001197224|BEAN1|146227|brain expressed, associated with NEDD4, 1##NM_001197225|BEAN1|146227|brain expressed, associated with NEDD4, 1##AB472397|TK2|7084|thymidine kinase 2, mitochondrial##U80628|TK2|7084|thymidine kinase 2, mitochondrial##AK302976|TK2|7084|thymidine kinase 2, mitochondrial	0.998153	CTCF.p2:-11:0.998
chr7	32386986	32387111	reg1005883.p1	12.832	+	NM_001191058	-48666	-	AK094180 NM_001191059 U40371 NM_005020	-276037	-	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	-276543	-	TSC_hg19_v1_chr7_-_32529998 AJ238097 AF182291 CU675199 AB463843 BC005938 AK022772 AK024217 NM_012322	142949	-	NM_001130710 NM_001139499	147821	-	TSC_hg19_v1_chr7_+_32535132 AL833560	148047	+	NM_001191058|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AJ238097|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182291|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC005938|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK022772|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK024217|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012322|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001130710|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001139499|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AL833560|AVL9|23080|AVL9 homolog (S. cerevisiase)	0.999691	CTCF.p2:9:1.000
chr1	154990093	154990211	reg1004849.p1	12.831	+	NM_001252406 TSC_hg19_v1_chr1_+_154975235 AK304762	-14905	+	TSC_hg19_v1_chr1_+_154975120 NM_001252405 NM_015872 AK291619 CR749303 BC012070	-15066	+	AF268478 BC069140 NM_018655 BC096714 BC098148 BC098246 BC098253 AB451457	-24080	+	BC111794 AK057496 NM_144622	16093	-	AK301935 NM_001143687 NM_152494 AK057347 AK301902 AK301876 BC064844	16211	+	TSC_hg19_v1_chr1_+_155023771 AK000667 AY560593 AY560594 AY560595 AY560596 AY560597 AY560598 AY560599 AY560600 AY560601 AY576417 NM_003815 NM_207191 NM_207194 NM_207195 NM_207196 NM_207197	33607	+	NM_001252406|ZBTB7B|51043|zinc finger and BTB domain containing 7B##AK304762|ZBTB7B|51043|zinc finger and BTB domain containing 7B##NM_001252405|ZBTB7B|51043|zinc finger and BTB domain containing 7B##NM_015872|ZBTB7B|51043|zinc finger and BTB domain containing 7B##AK291619|ZBTB7B|51043|zinc finger and BTB domain containing 7B##CR749303|ZBTB7B|51043|zinc finger and BTB domain containing 7B##BC012070|ZBTB7B|51043|zinc finger and BTB domain containing 7B##AF268478|LENEP|55891|lens epithelial protein##BC069140|LENEP|55891|lens epithelial protein##NM_018655|LENEP|55891|lens epithelial protein##BC096714|LENEP|55891|lens epithelial protein##BC098148|LENEP|55891|lens epithelial protein##BC098246|LENEP|55891|lens epithelial protein##BC098253|LENEP|55891|lens epithelial protein##AB451457|LENEP|55891|lens epithelial protein##BC111794|DCST2|127579|DC-STAMP domain containing 2##AK057496|DCST2|127579|DC-STAMP domain containing 2##NM_144622|DCST2|127579|DC-STAMP domain containing 2##AK301935|DCST1|149095|DC-STAMP domain containing 1##NM_001143687|DCST1|149095|DC-STAMP domain containing 1##NM_152494|DCST1|149095|DC-STAMP domain containing 1##AK057347|DCST1|149095|DC-STAMP domain containing 1##AK301902|DCST1|149095|DC-STAMP domain containing 1##AK301876|DCST1|149095|DC-STAMP domain containing 1##BC064844|DCST1|149095|DC-STAMP domain containing 1##AK000667|ADAM15|8751|ADAM metallopeptidase domain 15##AY560593|ADAM15|8751|ADAM metallopeptidase domain 15##AY560594|ADAM15|8751|ADAM metallopeptidase domain 15##AY560595|ADAM15|8751|ADAM metallopeptidase domain 15##AY560596|ADAM15|8751|ADAM metallopeptidase domain 15##AY560597|ADAM15|8751|ADAM metallopeptidase domain 15##AY560598|ADAM15|8751|ADAM metallopeptidase domain 15##AY560599|ADAM15|8751|ADAM metallopeptidase domain 15##AY560600|ADAM15|8751|ADAM metallopeptidase domain 15##AY560601|ADAM15|8751|ADAM metallopeptidase domain 15##AY576417|ADAM15|8751|ADAM metallopeptidase domain 15##NM_003815|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207191|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207194|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207195|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207196|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207197|ADAM15|8751|ADAM metallopeptidase domain 15	0.99871	CTCF.p2:-9:0.999
chr7	157066363	157066485	reg1003779.p2	12.831	+	TSC_hg19_v1_chr7_+_157023934 AK098447	-42418	+	D13635 TSC_hg19_v1_chr7_+_156931668 BC014029	-134741	+	TSC_hg19_v1_chr7_+_156931631 NM_014671	-134778	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	63287	+	TSC_hg19_v1_chr7_+_157647233 BC034557	580850	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	1314029	-	D13635|UBE3C|9690|ubiquitin protein ligase E3C##BC014029|UBE3C|9690|ubiquitin protein ligase E3C##NM_014671|UBE3C|9690|ubiquitin protein ligase E3C##AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC034557|LOC100506585|100506585|uncharacterized LOC100506585##DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	0.995357	CTCF.p2:5:0.995
chr1	165362245	165362382	reg1005140.p1	12.830	+	AK127724 NM_177398	-36362	-	AK122800 NM_001174069	-36838	-	TSC_hg19_v1_chr1_+_164818083 AK022520	-544190	+	AB593016 AK312922 NM_006917	52232	-	TSC_hg19_v1_chr1_+_165513441 NM_001005214 BC132981 BC132983	151159	+	NM_004528	237796	+	AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AB593016|RXRG|6258|retinoid X receptor, gamma##AK312922|RXRG|6258|retinoid X receptor, gamma##NM_006917|RXRG|6258|retinoid X receptor, gamma##NM_001005214|LRRC52|440699|leucine rich repeat containing 52##BC132981|LRRC52|440699|leucine rich repeat containing 52##BC132983|LRRC52|440699|leucine rich repeat containing 52##NM_004528|MGST3|4259|microsomal glutathione S-transferase 3	0.995235	CTCF.p2:-6:0.995
chr12	109011993	109012113	reg1004502.p2	12.830	+	AY358389 NM_181724 TSC_hg19_v1_chr12_-_108991924	-20145	-	TSC_hg19_v1_chr12_-_108991861 AK097290	-20201	-	AK295288 TSC_hg19_v1_chr12_-_108991834	-20220	-	AK298742 NM_001206609	13786	-	AK225644 U02297 AK295238 TSC_hg19_v1_chr12_-_109027584	15521	-	TSC_hg19_v1_chr12_-_109027639 AK300057 AK290395 BC029782	15580	-	AY358389|TMEM119|338773|transmembrane protein 119##NM_181724|TMEM119|338773|transmembrane protein 119##AK097290|TMEM119|338773|transmembrane protein 119##AK295288|TMEM119|338773|transmembrane protein 119##AK298742|SELPLG|6404|selectin P ligand##NM_001206609|SELPLG|6404|selectin P ligand##AK225644|SELPLG|6404|selectin P ligand##U02297|SELPLG|6404|selectin P ligand##AK295238|SELPLG|6404|selectin P ligand##AK290395|SELPLG|6404|selectin P ligand##BC029782|SELPLG|6404|selectin P ligand	0.999865	CTCF.p2:16:1.000
chr11	70042320	70042425	reg1004738.p1	12.829	+	AY728143 NM_018043 TSC_hg19_v1_chr11_+_69924473	-117932	+	NM_005247	-408181	-	M17446 NM_002007	-452202	-	NM_003824 TSC_hg19_v1_chr11_+_70049420 AK291005 AK293320 BC000334 X84709 U24231 BC025733 EU176185 AB587588 AY423721 BT006927 CR456738	7044	+	TSC_hg19_v1_chr11_+_70116795 NM_003626 NM_177423	74432	+	TSC_hg19_v1_chr11_+_70116841 BC034046 AB209314	74489	+	AY728143|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_018043|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_005247|FGF3|2248|fibroblast growth factor 3##M17446|FGF4|2249|fibroblast growth factor 4##NM_002007|FGF4|2249|fibroblast growth factor 4##NM_003824|FADD|8772|Fas (TNFRSF6)-associated via death domain##AK291005|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC000334|FADD|8772|Fas (TNFRSF6)-associated via death domain##X84709|FADD|8772|Fas (TNFRSF6)-associated via death domain##U24231|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC025733|FADD|8772|Fas (TNFRSF6)-associated via death domain##EU176185|FADD|8772|Fas (TNFRSF6)-associated via death domain##AY423721|FADD|8772|Fas (TNFRSF6)-associated via death domain##BT006927|FADD|8772|Fas (TNFRSF6)-associated via death domain##CR456738|FADD|8772|Fas (TNFRSF6)-associated via death domain##NM_003626|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##NM_177423|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##BC034046|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##AB209314|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1	0.998859	CTCF.p2:22:0.999
chr1	220469698	220469835	reg1006726.p1	12.829	+	TSC_hg19_v1_chr1_-_220445835 NM_012414	-23921	-	BC036513 TSC_hg19_v1_chr1_-_220445796	-23970	-	TSC_hg19_v1_chr1_-_220445786 AK291234	-23976	-	TSC_hg19_v1_chr1_+_220701527 BC068608	231759	+	TSC_hg19_v1_chr1_+_220701565 AB040910 NM_018650	231791	+	AK098103 AK314614 AF154845 BC113869 BC114478 TSC_hg19_v1_chr1_+_220702027 AK295506 AB385474	232216	+	NM_012414|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC036513|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AK291234|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC068608|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AB040910|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##NM_018650|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK098103|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK314614|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AF154845|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC113869|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC114478|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK295506|MARK1|4139|MAP/microtubule affinity-regulating kinase 1	0.322116	CTCF.p2:0:0.322
chr7	81673954	81674088	reg1006843.p1	12.829	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-274647	-	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-1125347	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-1125587	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	398825	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	399059	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	1117848	-	FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)	0.99959	CTCF.p2:-16:1.000
chr1	44502373	44502486	reg1006456.p1	12.828	+	TSC_hg19_v1_chr1_-_44497141 AK315933 NM_001024845	-5290	-	TSC_hg19_v1_chr1_-_44497033 AK304057 AK298611	-5387	-	NM_006934 NM_201649 S70609 S70612 AK315233	-19426	-	BC049844 NM_173484 AK097479 BC035408 CU690622	82120	+	TSC_hg19_v1_chr1_+_44679145 NM_001034023 NM_001034024 NM_019100 AL136657 AK300372 BC002855 AK300442 AK293598 AK021605 AK289366 AK298793 AB037846 AL137200 BC008053 AK300217	176714	+	AB528814 TSC_hg19_v1_chr1_-_44820904 AF007157	318379	-	AK315933|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_001024845|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK304057|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK298611|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##BC049844|KLF17|128209|Kruppel-like factor 17##NM_173484|KLF17|128209|Kruppel-like factor 17##AK097479|KLF17|128209|Kruppel-like factor 17##BC035408|KLF17|128209|Kruppel-like factor 17##NM_001034023|DMAP1|55929|DNA methyltransferase 1 associated protein 1##NM_001034024|DMAP1|55929|DNA methyltransferase 1 associated protein 1##NM_019100|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AL136657|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300372|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC002855|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300442|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK293598|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK021605|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK289366|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK298793|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AB037846|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AL137200|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC008053|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300217|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AF007157|ERI3|79033|ERI1 exoribonuclease family member 3	0.998755	CTCF.p2:-3:0.999
chr2	85294034	85294168	reg1006449.p1	12.828	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	-95610	+	TSC_hg19_v1_chr2_+_85198299 NM_020122	-95817	+	TSC_hg19_v1_chr2_+_85133055 M92381	-161039	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	66558	+	TSC_hg19_v1_chr2_-_85555100 CU678967 EU176441 EU176775 X94333 BC028219	260971	-	AK223063 TSC_hg19_v1_chr2_-_85555113 AK126465 AK222829 BX640733 AK312479 BC008461 AF027515 AF027516 U62390	261029	-	BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##M92381|TMSB10|9168|thymosin beta 10##BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##EU176441|TGOLN2|10618|trans-golgi network protein 2##EU176775|TGOLN2|10618|trans-golgi network protein 2##X94333|TGOLN2|10618|trans-golgi network protein 2##BC028219|TGOLN2|10618|trans-golgi network protein 2##AK223063|TGOLN2|10618|trans-golgi network protein 2##AK126465|TGOLN2|10618|trans-golgi network protein 2##AK222829|TGOLN2|10618|trans-golgi network protein 2##BX640733|TGOLN2|10618|trans-golgi network protein 2##AK312479|TGOLN2|10618|trans-golgi network protein 2##BC008461|TGOLN2|10618|trans-golgi network protein 2##AF027515|TGOLN2|10618|trans-golgi network protein 2##AF027516|TGOLN2|10618|trans-golgi network protein 2##U62390|TGOLN2|10618|trans-golgi network protein 2	0.659725	CTCF.p2:7:0.660
chr9	119622922	119623063	reg1006910.p1	12.828	+	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	-173386	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	-173530	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	-706922	+	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	554321	-	TSC_hg19_v1_chr9_-_120177336 BX649176	554342	-	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	843472	+	NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2##BX649176|ASTN2|23245|astrotactin 2##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4	0.997849	CTCF.p2:0:0.998
chr1	207578398	207578528	reg1004192.p2	12.827	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-83358	+	TSC_hg19_v1_chr1_+_207495084 AB240569 AB240570	-83386	+	TSC_hg19_v1_chr1_+_207495024 AK312448 AK300621 AK298549 BC001288 M30142 M31516	-83428	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	49198	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	91115	+	NM_175710 BC109190 BC109191	240024	+	AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240569|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240570|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK312448|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK300621|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK298549|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BC001288|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M30142|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M31516|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like	0.915895	CTCF.p2:-7:0.916
chr15	38975947	38976076	reg1005167.p2	12.826	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-119080	-	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-229666	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	-430989	+	AK093014 AX747856 BC119016 BC119810 NM_207444	12787	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	566914	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	897318	+	EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1	0.987836	CTCF.p2:12:0.988
chr22	37988643	37988786	reg1007133.p1	12.826	+	M87842 BC059782 NM_006498 CR456512	-12714	-	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	-32241	+	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	-73407	-	TSC_hg19_v1_chr22_+_38004480 NM_001001560 NM_001001561 NM_001172687 NM_013365 AK075256	15848	+	TSC_hg19_v1_chr22_+_38004843 CR456493 BC010917 AK290548 BC029388 AK225157 BC044629 AF190862 AF233521 AF218584	16056	+	TSC_hg19_v1_chr22_+_38004869 AB463055 CU013090 CU013378 CU692224	16169	+	M87842|LGALS2|3957|lectin, galactoside-binding, soluble, 2##BC059782|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_006498|LGALS2|3957|lectin, galactoside-binding, soluble, 2##CR456512|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10##NM_001001560|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001001561|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001172687|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_013365|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK075256|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CR456493|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC010917|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK290548|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC029388|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK225157|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC044629|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF190862|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF233521|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF218584|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CU013090|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CU013378|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1	0.999094	CTCF.p2:15:0.999
chr14	105915084	105915205	reg1006128.p1	12.825	+	TSC_hg19_v1_chr14_+_105886291 U35113 AF508978 AB590461	-28830	+	TSC_hg19_v1_chr14_+_105886196 BC142941 NM_001203258 NM_004689	-28962	+	AK123017 TSC_hg19_v1_chr14_-_105886160	-29009	-	TSC_hg19_v1_chr14_+_105941158 BC034151 NM_001312 AK315757 U36190 BC034386 BC128101 D42123 BC000434 BC001931 DQ891382 DQ894559 AB528485 AK223251 BT019911	25986	+	NM_001311	38112	+	TSC_hg19_v1_chr14_+_105953533 AK098290 U09770 BC002738 DQ892958 DQ896205 BT007181 U58630	38419	+	U35113|MTA1|9112|metastasis associated 1##AF508978|MTA1|9112|metastasis associated 1##BC142941|MTA1|9112|metastasis associated 1##NM_001203258|MTA1|9112|metastasis associated 1##NM_004689|MTA1|9112|metastasis associated 1##AK123017|LOC100507437|100507437|uncharacterized LOC100507437##BC034151|CRIP2|1397|cysteine-rich protein 2##NM_001312|CRIP2|1397|cysteine-rich protein 2##AK315757|CRIP2|1397|cysteine-rich protein 2##U36190|CRIP2|1397|cysteine-rich protein 2##BC034386|CRIP2|1397|cysteine-rich protein 2##BC128101|CRIP2|1397|cysteine-rich protein 2##D42123|CRIP2|1397|cysteine-rich protein 2##BC000434|CRIP2|1397|cysteine-rich protein 2##BC001931|CRIP2|1397|cysteine-rich protein 2##DQ891382|CRIP2|1397|cysteine-rich protein 2##DQ894559|CRIP2|1397|cysteine-rich protein 2##AK223251|CRIP2|1397|cysteine-rich protein 2##BT019911|CRIP2|1397|cysteine-rich protein 2##NM_001311|CRIP1|1396|cysteine-rich protein 1 (intestinal)##AK098290|CRIP1|1396|cysteine-rich protein 1 (intestinal)##U09770|CRIP1|1396|cysteine-rich protein 1 (intestinal)##BC002738|CRIP1|1396|cysteine-rich protein 1 (intestinal)##DQ892958|CRIP1|1396|cysteine-rich protein 1 (intestinal)##DQ896205|CRIP1|1396|cysteine-rich protein 1 (intestinal)##BT007181|CRIP1|1396|cysteine-rich protein 1 (intestinal)##U58630|CRIP1|1396|cysteine-rich protein 1 (intestinal)	0.617235	CTCF.p2:-3:0.617
chrUn_gl000219	40285	40393	reg1004806.p1	12.825	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.997852	CTCF.p2:-18:0.998
chr12	64233295	64233427	reg1007046.p1	12.823	+	BX647105 BX647419 TSC_hg19_v1_chr12_+_64173925	-59426	+	TSC_hg19_v1_chr12_+_64173629 AB015633 NM_014254 BC013152 BC002596 AK289382 CU680528 DQ891077 DQ894259	-59694	+	BC125215 BC125216 TSC_hg19_v1_chr12_-_64062283 AY358792 AL833344 AK310102 AK057511 BC068442 NM_173812	-171065	-	TSC_hg19_v1_chr12_+_64237847 BC065032	4365	+	TSC_hg19_v1_chr12_+_64238511 BC053903 NM_020762 BC029919	5185	+	BC071634 AK057111 BC036246 AK129933 NM_152440	382692	-	BX647105|TMEM5|10329|transmembrane protein 5##BX647419|TMEM5|10329|transmembrane protein 5##AB015633|TMEM5|10329|transmembrane protein 5##NM_014254|TMEM5|10329|transmembrane protein 5##BC013152|TMEM5|10329|transmembrane protein 5##BC002596|TMEM5|10329|transmembrane protein 5##AK289382|TMEM5|10329|transmembrane protein 5##DQ891077|TMEM5|10329|transmembrane protein 5##DQ894259|TMEM5|10329|transmembrane protein 5##BC125215|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC125216|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AY358792|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AL833344|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK310102|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK057511|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC068442|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_173812|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC071634|C12orf66|144577|chromosome 12 open reading frame 66##AK057111|C12orf66|144577|chromosome 12 open reading frame 66##BC036246|C12orf66|144577|chromosome 12 open reading frame 66##AK129933|C12orf66|144577|chromosome 12 open reading frame 66##NM_152440|C12orf66|144577|chromosome 12 open reading frame 66	0.930774	CTCF.p2:-7:0.931
chr2	131555137	131555272	reg1006130.p1	12.822	+	TSC_hg19_v1_chr2_+_131513793 NM_001105194 NM_001105195	-41382	+	AK289525 NM_152698 AK095696 AK291424 BC113445 BC113447 BC143806 NM_001105193	-42089	+	BC105013 BC105041 NM_207364 AY569570 AY280965	-68521	+	AF249745 NM_015320 NM_032995	119019	+	TSC_hg19_v1_chr2_-_131851008 BC066347 BC110642 NM_001009993	295794	-	AK126289 NM_001100623 NM_017958	307215	+	NM_001105194|FAM123C|205147|family with sequence similarity 123C##NM_001105195|FAM123C|205147|family with sequence similarity 123C##AK289525|FAM123C|205147|family with sequence similarity 123C##NM_152698|FAM123C|205147|family with sequence similarity 123C##AK095696|FAM123C|205147|family with sequence similarity 123C##AK291424|FAM123C|205147|family with sequence similarity 123C##BC113445|FAM123C|205147|family with sequence similarity 123C##BC113447|FAM123C|205147|family with sequence similarity 123C##BC143806|FAM123C|205147|family with sequence similarity 123C##NM_001105193|FAM123C|205147|family with sequence similarity 123C##BC105013|GPR148|344561|G protein-coupled receptor 148##BC105041|GPR148|344561|G protein-coupled receptor 148##NM_207364|GPR148|344561|G protein-coupled receptor 148##AY569570|GPR148|344561|G protein-coupled receptor 148##AY280965|GPR148|344561|G protein-coupled receptor 148##AF249745|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##NM_015320|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##NM_032995|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##BC066347|FAM168B|130074|family with sequence similarity 168, member B##BC110642|FAM168B|130074|family with sequence similarity 168, member B##NM_001009993|FAM168B|130074|family with sequence similarity 168, member B##AK126289|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_001100623|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_017958|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2	0.997013	CTCF.p2:-15:0.997
chr3	141160322	141160438	reg1005660.p1	12.822	+	AK311479 TSC_hg19_v1_chr3_+_141105293	-55092	+	TSC_hg19_v1_chr3_+_141087345 AK311501	-73023	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	-117324	+	TSC_hg19_v1_chr3_+_141205882 AK292016 AK301015 AF115573 D78155 D82880 NM_006506	45491	+	TSC_hg19_v1_chr3_+_141457045 NM_001201370 NM_014245 NM_183237	296689	+	TSC_hg19_v1_chr3_+_141457129 AK311982	296740	+	AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK292016|RASA2|5922|RAS p21 protein activator 2##AK301015|RASA2|5922|RAS p21 protein activator 2##AF115573|RASA2|5922|RAS p21 protein activator 2##D78155|RASA2|5922|RAS p21 protein activator 2##D82880|RASA2|5922|RAS p21 protein activator 2##NM_006506|RASA2|5922|RAS p21 protein activator 2##NM_001201370|RNF7|9616|ring finger protein 7##NM_014245|RNF7|9616|ring finger protein 7##NM_183237|RNF7|9616|ring finger protein 7##AK311982|RNF7|9616|ring finger protein 7	0.01154	
chr13	78167291	78167439	reg1006158.p1	12.821	+	NM_001160706 NM_003843 NM_144777 BC020726 AF045941 AK025320 AK222720 AK301659	-57514	+	NM_015057 TSC_hg19_v1_chr13_-_77901230	-266162	-	TSC_hg19_v1_chr13_-_77601303 AK314442 NM_012158	-566034	-	TSC_hg19_v1_chr13_+_78271822 NM_001242868	104539	+	AK294201 NM_001040153	105650	+	NM_001242869 NM_001242870 NM_001242871 NM_144595 AL834203 AK289600 BC045177 AK289714 AK295423	148041	+	NM_001160706|SCEL|8796|sciellin##NM_003843|SCEL|8796|sciellin##NM_144777|SCEL|8796|sciellin##BC020726|SCEL|8796|sciellin##AF045941|SCEL|8796|sciellin##AK025320|SCEL|8796|sciellin##AK222720|SCEL|8796|sciellin##AK301659|SCEL|8796|sciellin##NM_015057|MYCBP2|23077|MYC binding protein 2##AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_001242868|SLAIN1|122060|SLAIN motif family, member 1##AK294201|SLAIN1|122060|SLAIN motif family, member 1##NM_001040153|SLAIN1|122060|SLAIN motif family, member 1##NM_001242869|SLAIN1|122060|SLAIN motif family, member 1##NM_001242870|SLAIN1|122060|SLAIN motif family, member 1##NM_001242871|SLAIN1|122060|SLAIN motif family, member 1##NM_144595|SLAIN1|122060|SLAIN motif family, member 1##AL834203|SLAIN1|122060|SLAIN motif family, member 1##AK289600|SLAIN1|122060|SLAIN motif family, member 1##BC045177|SLAIN1|122060|SLAIN motif family, member 1##AK289714|SLAIN1|122060|SLAIN motif family, member 1##AK295423|SLAIN1|122060|SLAIN motif family, member 1	0.768597	CTCF.p2:-8:0.769
chr17	2752205	2752332	reg1006864.p1	12.821	+	AJ628446 AJ628447 NM_001100398 NM_015085 TSC_hg19_v1_chr17_+_2699761 CR627427 BC140870 BC140871	-52515	+	AK124640 TSC_hg19_v1_chr17_+_2680496	-71845	+	NM_015229 TSC_hg19_v1_chr17_-_2615039	-137281	-	BC106876 NM_014566 AB529301	214659	-	AB529300 BC069552 BC106735 BC106736 NM_002548	244021	-	BC069379 NM_003555 BC095520 AB529303	278633	-	AJ628446|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AJ628447|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_001100398|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015085|RAP1GAP2|23108|RAP1 GTPase activating protein 2##CR627427|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140870|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140871|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AK124640|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015229|KIAA0664|23277|KIAA0664##BC106876|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##NM_014566|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1##NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1##BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	0.997195	CTCF.p2:-7:0.997
chr1	25428049	25428171	reg1004843.p1	12.820	+	BC013362 AK310945 NM_001031680 AF022726	-136568	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-171324	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-171371	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	130877	-	BC065040 TSC_hg19_v1_chr1_-_25573922	145813	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	145863	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.99789	CTCF.p2:-7:0.998
chr8	18726022	18726141	reg1007104.p1	12.820	+	AB463178 BC045112 AB023159 NM_206909	-59732	-	EU832144 EU832237 AK296546 BX647320 BX647406 TSC_hg19_v1_chr8_-_18541614	-184549	-	D90042 NM_000015 BC067218 BC015878 D90040 AJ581144	-477293	+	GU727648 TSC_hg19_v1_chr8_-_18871128	145031	-	TSC_hg19_v1_chr8_-_18871214 AK091317 AX746913 NM_015310	145205	-	TSC_hg19_v1_chr8_+_19171505 NM_001174160 NM_022071 AK024799 AK293301 BC082982 NM_001174159	445202	+	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3##AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3##EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3##EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3##AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3##D90042|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##NM_000015|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC067218|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC015878|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##D90040|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##AJ581144|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3##AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_001174160|SH2D4A|63898|SH2 domain containing 4A##NM_022071|SH2D4A|63898|SH2 domain containing 4A##AK024799|SH2D4A|63898|SH2 domain containing 4A##AK293301|SH2D4A|63898|SH2 domain containing 4A##BC082982|SH2D4A|63898|SH2 domain containing 4A##NM_001174159|SH2D4A|63898|SH2 domain containing 4A	0.95401	CTCF.p2:-2:0.954
chr18	47037146	47037268	reg1005470.p2	12.819	+	TSC_hg19_v1_chr18_-_47018852 AK304659 AK311828 BC066323 BC017831 BC066324 NM_000985 NM_001035006 NM_001199340 NM_001199345 NM_001199356	-18319	-	TSC_hg19_v1_chr18_-_47018826 NM_001199341 NM_001199342 NM_001199343 NM_001199344 BC000502	-18378	-	TSC_hg19_v1_chr18_-_47018813 AK311720	-18409	-	TSC_hg19_v1_chr18_+_47087059 AK125344	49855	+	AK315252 TSC_hg19_v1_chr18_+_47088426 AF118767 AK291799 NM_006033 AK300333 BC060825 AY358928	51221	+	CU674934 DQ893376 DQ896697 AB529169 BC001918 TSC_hg19_v1_chr18_-_47339904 AK225457 D16294	302707	-	AK304659|RPL17|6139|ribosomal protein L17##AK311828|RPL17|6139|ribosomal protein L17##BC066323|RPL17|6139|ribosomal protein L17##BC017831|RPL17|6139|ribosomal protein L17##BC066324|RPL17|6139|ribosomal protein L17##NM_000985|RPL17|6139|ribosomal protein L17##NM_001035006|RPL17|6139|ribosomal protein L17##NM_001199340|RPL17|6139|ribosomal protein L17##NM_001199345|RPL17|6139|ribosomal protein L17##NM_001199356|RPL17-C18ORF32|100526842|RPL17-C18orf32 readthrough##NM_001199341|RPL17|6139|ribosomal protein L17##NM_001199342|RPL17|6139|ribosomal protein L17##NM_001199343|RPL17|6139|ribosomal protein L17##NM_001199344|RPL17|6139|ribosomal protein L17##BC000502|RPL17|6139|ribosomal protein L17##AK311720|RPL17|6139|ribosomal protein L17##AK125344|LIPG|9388|lipase, endothelial##AK315252|LIPG|9388|lipase, endothelial##AF118767|LIPG|9388|lipase, endothelial##AK291799|LIPG|9388|lipase, endothelial##NM_006033|LIPG|9388|lipase, endothelial##AK300333|LIPG|9388|lipase, endothelial##BC060825|LIPG|9388|lipase, endothelial##AY358928|LIPG|9388|lipase, endothelial##DQ893376|ACAA2|10449|acetyl-CoA acyltransferase 2##DQ896697|ACAA2|10449|acetyl-CoA acyltransferase 2##BC001918|ACAA2|10449|acetyl-CoA acyltransferase 2##AK225457|ACAA2|10449|acetyl-CoA acyltransferase 2##D16294|ACAA2|10449|acetyl-CoA acyltransferase 2	0.999651	CTCF.p2:-7:1.000
chr1	117267500	117267643	reg1007572.p1	12.817	+	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	-57188	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	-153894	-	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	-153956	-	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	29536	+	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	185071	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	276834	+	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule	0.491571	CTCF.p2:-5:0.492
chr11	74281675	74281805	reg1007377.p1	12.817	+	TSC_hg19_v1_chr11_-_74204756 NM_001144869	-76990	-	CR936625 DQ192291 NM_005472	-103144	-	TSC_hg19_v1_chr11_-_74109469 BC027950 AB019210 AK056591 BC059360 NM_173582	-172250	-	AK302677 AK316370 D26018 NM_006591 TSC_hg19_v1_chr11_+_74303654 BC092454 AK316301 BC108908 BC108909 BC032636 BC058840 BC041703 AB383722	21923	+	NM_015424 AK304519 AY358522 AY279090 AY279091	160465	-	BC142623 TSC_hg19_v1_chr11_-_74442472	160713	-	NM_001144869|LIPT2|387787|lipoyl(octanoyl) transferase 2 (putative)##CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##AB019210|PGM2L1|283209|phosphoglucomutase 2-like 1##AK056591|PGM2L1|283209|phosphoglucomutase 2-like 1##BC059360|PGM2L1|283209|phosphoglucomutase 2-like 1##NM_173582|PGM2L1|283209|phosphoglucomutase 2-like 1##AK302677|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316370|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##D26018|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_006591|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC092454|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316301|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108908|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108909|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC032636|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC058840|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC041703|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_015424|CHRDL2|25884|chordin-like 2##AK304519|CHRDL2|25884|chordin-like 2##AY358522|CHRDL2|25884|chordin-like 2##AY279090|CHRDL2|25884|chordin-like 2##AY279091|CHRDL2|25884|chordin-like 2##BC142623|CHRDL2|25884|chordin-like 2	0.817089	CTCF.p2:12:0.817
chr12	72140872	72140998	reg1005591.p1	12.817	+	TSC_hg19_v1_chr12_+_72080176 AK001798 AK223148 AK315587	-60708	+	TSC_hg19_v1_chr12_+_72079873 BC008596 NM_018279	-61056	+	TSC_hg19_v1_chr12_+_72058114 AK313452 AB528248 AM393083 CR533485	-82796	+	BC021901 BC092475 TSC_hg19_v1_chr12_+_72148653 AF091035 NM_014999	7720	+	AB385582 AM393692 TSC_hg19_v1_chr12_+_72148987	8013	+	NM_001146213 NM_001146214 NM_022771 TSC_hg19_v1_chr12_+_72233538 AK022147 AK297626 AK307922 BC028352 AK225747 AL833639 AK225221 AK292306 AB449901	92600	+	AK001798|TMEM19|55266|transmembrane protein 19##AK223148|TMEM19|55266|transmembrane protein 19##AK315587|TMEM19|55266|transmembrane protein 19##BC008596|TMEM19|55266|transmembrane protein 19##NM_018279|TMEM19|55266|transmembrane protein 19##AK313452|THAP2|83591|THAP domain containing, apoptosis associated protein 2##AM393083|THAP2|83591|THAP domain containing, apoptosis associated protein 2##CR533485|THAP2|83591|THAP domain containing, apoptosis associated protein 2##BC021901|RAB21|23011|RAB21, member RAS oncogene family##BC092475|RAB21|23011|RAB21, member RAS oncogene family##AF091035|RAB21|23011|RAB21, member RAS oncogene family##NM_014999|RAB21|23011|RAB21, member RAS oncogene family##AM393692|RAB21|23011|RAB21, member RAS oncogene family##NM_001146213|TBC1D15|64786|TBC1 domain family, member 15##NM_001146214|TBC1D15|64786|TBC1 domain family, member 15##NM_022771|TBC1D15|64786|TBC1 domain family, member 15##AK022147|TBC1D15|64786|TBC1 domain family, member 15##AK297626|TBC1D15|64786|TBC1 domain family, member 15##AK307922|TBC1D15|64786|TBC1 domain family, member 15##BC028352|TBC1D15|64786|TBC1 domain family, member 15##AK225747|TBC1D15|64786|TBC1 domain family, member 15##AL833639|TBC1D15|64786|TBC1 domain family, member 15##AK225221|TBC1D15|64786|TBC1 domain family, member 15##AK292306|TBC1D15|64786|TBC1 domain family, member 15##AB449901|TBC1D15|64786|TBC1 domain family, member 15	0.0	
chr17	66197029	66197157	reg1006648.p1	12.817	+	TSC_hg19_v1_chr17_+_66097706 BC045718	-99395	+	TSC_hg19_v1_chr17_+_66031889 BC034443	-165205	+	TSC_hg19_v1_chr17_+_66031850 NM_002266 U09559 U28386 AK024833 AK058111 AK291954 BC005978 BC013257 BC053343 BC146905	-165253	+	NM_001033569 NM_001033570 NM_001033571 NM_001033572 NM_001033574 NM_016627 TSC_hg19_v1_chr17_+_66244216 BC056271 BC050709	47087	+	TSC_hg19_v1_chr17_+_66244233 AF208856	47150	+	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	58241	+	BC045718|LOC100499466|100499466|uncharacterized LOC100499466##BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##NM_001033569|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033570|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033571|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033572|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033574|AMZ2|51321|archaelysin family metallopeptidase 2##NM_016627|AMZ2|51321|archaelysin family metallopeptidase 2##BC056271|AMZ2|51321|archaelysin family metallopeptidase 2##BC050709|AMZ2|51321|archaelysin family metallopeptidase 2##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G	0.553069	CTCF.p2:7:0.553
chr19	6022398	6022525	reg1006664.p1	12.817	+	AK299856 TSC_hg19_v1_chr19_-_5978306 NM_003624 NM_007320 NM_007322	-44177	-	AK025300 AK299260 AK314343 TSC_hg19_v1_chr19_-_5978152	-44310	-	CU678680 DQ234346 AK308205 TSC_hg19_v1_chr19_-_5978122 BC004349 AL050149 AK222813 AK301942 Y08698 AK222990	-44349	-	TSC_hg19_v1_chr19_-_6110512 AK291196 BC071571 X76091	88062	-	TSC_hg19_v1_chr19_-_6110613 BC028579 AK303321 NM_000635 NM_134433	88151	-	AY009107 BC022027 AK093433 AX748123 AK302604 AJ577571 NM_030924 BC090046 AL136854	113292	+	AK299856|RANBP3|8498|RAN binding protein 3##NM_003624|RANBP3|8498|RAN binding protein 3##NM_007320|RANBP3|8498|RAN binding protein 3##NM_007322|RANBP3|8498|RAN binding protein 3##AK025300|RANBP3|8498|RAN binding protein 3##AK299260|RANBP3|8498|RAN binding protein 3##AK314343|RANBP3|8498|RAN binding protein 3##DQ234346|RANBP3|8498|RAN binding protein 3##AK308205|RANBP3|8498|RAN binding protein 3##BC004349|RANBP3|8498|RAN binding protein 3##AL050149|RANBP3|8498|RAN binding protein 3##AK222813|RANBP3|8498|RAN binding protein 3##AK301942|RANBP3|8498|RAN binding protein 3##Y08698|RANBP3|8498|RAN binding protein 3##AK222990|RANBP3|8498|RAN binding protein 3##AK291196|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC071571|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##X76091|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC028579|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK303321|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_000635|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_134433|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AY009107|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC022027|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK093433|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK302604|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AJ577571|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##NM_030924|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC090046|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AL136854|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2	0.334781	CTCF.p2:20:0.335
chr21	36772857	36772978	reg1004698.p2	12.816	+	AK310646 TSC_hg19_v1_chr21_-_36421641 D43969	-351282	-	TSC_hg19_v1_chr21_-_36421598 NM_001754	-351314	-	TSC_hg19_v1_chr21_-_36421585 AK310587 D89788 D89789 D89790	-351336	-	AK095215 BC002898 TSC_hg19_v1_chr21_-_37432613 AB004853 NM_001007259 AF391112 AK001660	659703	-	BC036556 TSC_hg19_v1_chr21_-_37432809 AK300009 NM_017438	659899	-	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	669336	+	D43969|RUNX1|861|runt-related transcription factor 1##NM_001754|RUNX1|861|runt-related transcription factor 1##AK310587|RUNX1|861|runt-related transcription factor 1##D89788|RUNX1|861|runt-related transcription factor 1##D89789|RUNX1|861|runt-related transcription factor 1##D89790|RUNX1|861|runt-related transcription factor 1##AK095215|SETD4|54093|SET domain containing 4##BC002898|SETD4|54093|SET domain containing 4##AB004853|SETD4|54093|SET domain containing 4##NM_001007259|SETD4|54093|SET domain containing 4##AF391112|SETD4|54093|SET domain containing 4##AK001660|SETD4|54093|SET domain containing 4##BC036556|SETD4|54093|SET domain containing 4##AK300009|SETD4|54093|SET domain containing 4##NM_017438|SETD4|54093|SET domain containing 4##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1	0.799635	CTCF.p2:11:0.800
chr1	160804884	160805014	reg1006756.p1	12.815	+	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	-38951	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-95885	+	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	-123363	-	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	27629	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	50009	-	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	119610	-	NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2	1.032101	CTCF.p2:-9:0.995
chr2	192555788	192555918	reg1003743.p1	12.815	+	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	-12991	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-445755	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-539546	-	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	155885	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	156118	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	503461	-	NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2	0.990513	CTCF.p2:5:0.991
chr2	43202316	43202448	reg1005941.p1	12.815	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-182631	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-211082	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-406485	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	250963	-	TSC_hg19_v1_chr2_-_43453736 BC020369	251348	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	251360	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.417104	CTCF.p2:2:0.417
chr12	131232795	131232928	reg1005922.p1	12.814	+	TSC_hg19_v1_chr12_-_131200818 BC007632	-32036	-	AB002316 NM_015347	-230452	-	TSC_hg19_v1_chr12_+_130822635 BC028581 AF387507 AF104260 AK093133 AX747944	-410239	+	TSC_hg19_v1_chr12_-_131323796 D14582 BC047496 NM_001980 NM_194356	90892	-	TSC_hg19_v1_chr12_+_131356615 AF054183 AK311223 AK316193 AK312466 BC000852 NM_006325	123725	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	123764	+	BC007632|RIMBP2|23504|RIMS binding protein 2##AB002316|RIMBP2|23504|RIMS binding protein 2##NM_015347|RIMBP2|23504|RIMS binding protein 2##BC028581|PIWIL1|9271|piwi-like 1 (Drosophila)##AF387507|PIWIL1|9271|piwi-like 1 (Drosophila)##AF104260|PIWIL1|9271|piwi-like 1 (Drosophila)##AK093133|PIWIL1|9271|piwi-like 1 (Drosophila)##D14582|STX2|2054|syntaxin 2##BC047496|STX2|2054|syntaxin 2##NM_001980|STX2|2054|syntaxin 2##NM_194356|STX2|2054|syntaxin 2##AF054183|RAN|5901|RAN, member RAS oncogene family##AK316193|RAN|5901|RAN, member RAS oncogene family##AK312466|RAN|5901|RAN, member RAS oncogene family##BC000852|RAN|5901|RAN, member RAS oncogene family##NM_006325|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family	0.982588	CTCF.p2:6:0.983
chr2	62220714	62220846	reg1004577.p1	12.813	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-87951	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-104994	-	TSC_hg19_v1_chr2_-_62115733 BC106933 BC106934 AF026291	-105046	-	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	202486	+	BC047439 AK091902 AX747245 NM_198276	512759	-	AK292545 NM_001142615	680205	+	AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106933|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106934|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AF026291|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1	0.993573	CTCF.p2:-19:0.994
chr17	76010044	76010172	reg1006907.p1	12.811	+	BC039479 NM_001142640 NM_018996	-9826	+	TSC_hg19_v1_chr17_+_75543021 AK096234	-467088	+	AK056495 NM_001113495	-538784	+	TSC_hg19_v1_chr17_-_76124768 AK074065	114664	-	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	114730	-	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	116758	+	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK074065|TMC6|11322|transmembrane channel-like 6##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8	0.973031	CTCF.p2:16:0.973
chr10	105619077	105619200	reg1006280.p1	12.810	+	TSC_hg19_v1_chr10_-_105615306 NM_014631	-3868	-	TSC_hg19_v1_chr10_-_105452931 AK294736 AK295314 AK315983 AK295660	-166188	-	TSC_hg19_v1_chr10_-_105437934 AK304828	-181217	-	TSC_hg19_v1_chr10_-_105677943 BC017400	58791	-	TSC_hg19_v1_chr10_-_105677986 NM_024928	58877	-	TSC_hg19_v1_chr10_+_105726926 AK307389	107748	+	NM_014631|SH3PXD2A|9644|SH3 and PX domains 2A##AK294736|SH3PXD2A|9644|SH3 and PX domains 2A##AK295314|SH3PXD2A|9644|SH3 and PX domains 2A##AK315983|SH3PXD2A|9644|SH3 and PX domains 2A##AK295660|SH3PXD2A|9644|SH3 and PX domains 2A##AK304828|SH3PXD2A|9644|SH3 and PX domains 2A##BC017400|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1##NM_024928|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1##AK307389|SLK|9748|STE20-like kinase	0.960379	CTCF.p2:8:0.960
chr17	47304901	47305022	reg1006090.p1	12.809	+	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-16884	+	NM_001198754	-17026	-	AB037886 NM_001135186 NM_016428	-17373	+	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	3182	-	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	134619	-	BC095460 TSC_hg19_v1_chr17_-_47492215	187254	-	BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AB037886|ABI3|51225|ABI family, member 3##NM_001135186|ABI3|51225|ABI family, member 3##NM_016428|ABI3|51225|ABI family, member 3##BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC095460|PHB|5245|prohibitin	0.999858	CTCF.p2:9:1.000
chr2	207558530	207558660	reg1005119.p1	12.808	+	NM_001102659	-51454	+	AK129906 TSC_hg19_v1_chr2_+_207406857	-151759	+	TSC_hg19_v1_chr2_+_207308286 AB009672 NM_003812 BC132763 BC132765	-250262	+	DQ516347 NM_001093730	24524	-	AK292386 BC033509 BC088356 AK302250 AK309144 NM_001039845 AK308257	71435	-	NM_001136193 NM_001136194 NM_014929	71516	+	NM_001102659|LOC200726|200726|hCG1657980##AK129906|ADAM23|8745|ADAM metallopeptidase domain 23##AB009672|ADAM23|8745|ADAM metallopeptidase domain 23##NM_003812|ADAM23|8745|ADAM metallopeptidase domain 23##BC132763|ADAM23|8745|ADAM metallopeptidase domain 23##BC132765|ADAM23|8745|ADAM metallopeptidase domain 23##DQ516347|DYTN|391475|dystrotelin##NM_001093730|DYTN|391475|dystrotelin##AK292386|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##BC033509|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##BC088356|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK302250|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK309144|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##NM_001039845|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK308257|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##NM_001136193|FASTKD2|22868|FAST kinase domains 2##NM_001136194|FASTKD2|22868|FAST kinase domains 2##NM_014929|FASTKD2|22868|FAST kinase domains 2	0.509281	CTCF.p2:-11:0.509
chr1	224832395	224832501	reg1004852.p1	12.807	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-28269	+	AB209887 NM_001115113 NM_025160	-210448	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-210688	-	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	284917	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	783281	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	783353	-	AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor	0.947398	CTCF.p2:-4:0.947
chr12	65996397	65996503	reg1004683.p1	12.807	+	TSC_hg19_v1_chr12_+_65672705 NM_001193461	-323726	+	NM_001031679 NM_001193460 NM_198080 TSC_hg19_v1_chr12_+_65672483 AK316365 AK293084 AK299065 AY358229 BX648776 AL833622 BC040053	-323925	+	TSC_hg19_v1_chr12_+_65563362 AK312473 NM_001167614 NM_014319 AK304317 AF112299	-433096	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	221757	+	TSC_hg19_v1_chr12_+_66218605 AK311399	222157	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	222563	+	NM_001193461|MSRB3|253827|methionine sulfoxide reductase B3##NM_001031679|MSRB3|253827|methionine sulfoxide reductase B3##NM_001193460|MSRB3|253827|methionine sulfoxide reductase B3##NM_198080|MSRB3|253827|methionine sulfoxide reductase B3##AK316365|MSRB3|253827|methionine sulfoxide reductase B3##AK293084|MSRB3|253827|methionine sulfoxide reductase B3##AK299065|MSRB3|253827|methionine sulfoxide reductase B3##AY358229|MSRB3|253827|methionine sulfoxide reductase B3##BX648776|MSRB3|253827|methionine sulfoxide reductase B3##AL833622|MSRB3|253827|methionine sulfoxide reductase B3##BC040053|MSRB3|253827|methionine sulfoxide reductase B3##AK312473|LEMD3|23592|LEM domain containing 3##NM_001167614|LEMD3|23592|LEM domain containing 3##NM_014319|LEMD3|23592|LEM domain containing 3##AK304317|LEMD3|23592|LEM domain containing 3##AF112299|LEMD3|23592|LEM domain containing 3##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2	0.669859	CTCF.p2:0:0.670
chr1	40265419	40265565	reg1005266.p2	12.807	+	TSC_hg19_v1_chr1_-_40254528 AY303955 NM_001720	-10966	-	TSC_hg19_v1_chr1_-_40254516 BC108678	-10977	-	BC023526 TSC_hg19_v1_chr1_-_40254233	-11303	-	AY702933 AY702934 AY702935 AY702936 AY702937 AY702938 AY702939 AY702940 AY702941 AY702942 AY702943 AY702944 AY702945 AY702946 AY702947 TSC_hg19_v1_chr1_-_40349138 AY052768 BC010741	83632	-	AK296453 AK307910 TSC_hg19_v1_chr1_-_40349167	83675	-	TSC_hg19_v1_chr1_-_40349179 AK223478 AK304759 AY303390 BC128155 BC128156 NM_017646 BC107569	83682	-	AY303955|BMP8B|656|bone morphogenetic protein 8b##NM_001720|BMP8B|656|bone morphogenetic protein 8b##BC108678|BMP8B|656|bone morphogenetic protein 8b##BC023526|BMP8B|656|bone morphogenetic protein 8b##AY702933|TRIT1|54802|tRNA isopentenyltransferase 1##AY702934|TRIT1|54802|tRNA isopentenyltransferase 1##AY702935|TRIT1|54802|tRNA isopentenyltransferase 1##AY702936|TRIT1|54802|tRNA isopentenyltransferase 1##AY702937|TRIT1|54802|tRNA isopentenyltransferase 1##AY702938|TRIT1|54802|tRNA isopentenyltransferase 1##AY702939|TRIT1|54802|tRNA isopentenyltransferase 1##AY702940|TRIT1|54802|tRNA isopentenyltransferase 1##AY702941|TRIT1|54802|tRNA isopentenyltransferase 1##AY702942|TRIT1|54802|tRNA isopentenyltransferase 1##AY702943|TRIT1|54802|tRNA isopentenyltransferase 1##AY702944|TRIT1|54802|tRNA isopentenyltransferase 1##AY702945|TRIT1|54802|tRNA isopentenyltransferase 1##AY702946|TRIT1|54802|tRNA isopentenyltransferase 1##AY702947|TRIT1|54802|tRNA isopentenyltransferase 1##AY052768|TRIT1|54802|tRNA isopentenyltransferase 1##BC010741|TRIT1|54802|tRNA isopentenyltransferase 1##AK296453|TRIT1|54802|tRNA isopentenyltransferase 1##AK307910|TRIT1|54802|tRNA isopentenyltransferase 1##AK223478|TRIT1|54802|tRNA isopentenyltransferase 1##AK304759|TRIT1|54802|tRNA isopentenyltransferase 1##AY303390|TRIT1|54802|tRNA isopentenyltransferase 1##BC128155|TRIT1|54802|tRNA isopentenyltransferase 1##BC128156|TRIT1|54802|tRNA isopentenyltransferase 1##NM_017646|TRIT1|54802|tRNA isopentenyltransferase 1##BC107569|TRIT1|54802|tRNA isopentenyltransferase 1	0.998884	CTCF.p2:21:0.999
chr17	31237027	31237141	reg1005141.p1	12.807	+	TSC_hg19_v1_chr17_-_31204196 BC030602	-32871	-	TSC_hg19_v1_chr17_-_31204141 AK127942	-32961	-	CU688936 AB385376 AB018270 BC146763 NM_015194	-33189	-	NM_001033504 NM_015544	17843	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	18119	+	AF216311 NM_173847 BC100886 BC100887	81818	+	BC030602|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##NM_001033504|TMEM98|26022|transmembrane protein 98##NM_015544|TMEM98|26022|transmembrane protein 98##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3	0.160354	
chr5	114970516	114970634	reg1005170.p2	12.807	+	TSC_hg19_v1_chr5_-_114961708 AY304583 AY304584 BC019349 AK075218 AK304210 AK027512 NM_001164468 NM_001164469 NM_181836	-8781	-	TSC_hg19_v1_chr5_-_114961697 AK074962	-8883	-	BC109265 BC109266 NM_021649	-32458	-	D85777 Z31357 BC024241 AK130357 AK314231 TSC_hg19_v1_chr5_-_115152355 AK309390 NM_001801	181788	-	BC011033 TSC_hg19_v1_chr5_-_115177263 AB017507 AB590693 EU554057 BC012266 AK313320 NM_004707	206829	-	TSC_hg19_v1_chr5_+_115177642 NM_001284 BX647735 U91932 BC000804 D63643 BC012614 X99458 DQ891198 DQ894381 AK311843 BT009833 CR450341	207100	+	AY304583|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AY304584|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##BC019349|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK075218|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AK304210|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK027512|TMED7|51014|transmembrane emp24 protein transport domain containing 7##NM_001164468|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_001164469|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_181836|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK074962|TMED7|51014|transmembrane emp24 protein transport domain containing 7##BC109265|TICAM2|353376|toll-like receptor adaptor molecule 2##BC109266|TICAM2|353376|toll-like receptor adaptor molecule 2##NM_021649|TICAM2|353376|toll-like receptor adaptor molecule 2##D85777|CDO1|1036|cysteine dioxygenase, type I##Z31357|CDO1|1036|cysteine dioxygenase, type I##BC024241|CDO1|1036|cysteine dioxygenase, type I##AK130357|CDO1|1036|cysteine dioxygenase, type I##AK314231|CDO1|1036|cysteine dioxygenase, type I##NM_001801|CDO1|1036|cysteine dioxygenase, type I##BC011033|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##AB017507|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##EU554057|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##BC012266|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##AK313320|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##NM_004707|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##NM_001284|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BX647735|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##U91932|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC000804|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##D63643|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC012614|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##X99458|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ891198|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ894381|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##AK311843|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BT009833|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##CR450341|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit	0.647427	CTCF.p2:4:0.647
chr18	64884932	64885068	reg1006678.p1	12.806	+	AJ007607 NM_021153 AK304000 AK315257 BC015877	-613689	-	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-1466798	+	TSC_hg19_v1_chr18_+_63417845 BC036786	-1467134	+	AK021849 TSC_hg19_v1_chr18_-_65182656	297583	-	TSC_hg19_v1_chr18_-_65183956 NM_032160	298946	-	AM393206 AM393295 CU689334 TSC_hg19_v1_chr18_-_66382307 AK307269 AK295551 BC032325 AL832341 AL832356 BC093792 BC093794 BC143400 AB058733	1497266	-	AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AK021849|DSEL|92126|dermatan sulfate epimerase-like##NM_032160|DSEL|92126|dermatan sulfate epimerase-like##AM393206|TMX3|54495|thioredoxin-related transmembrane protein 3##AM393295|TMX3|54495|thioredoxin-related transmembrane protein 3##AK307269|TMX3|54495|thioredoxin-related transmembrane protein 3##AK295551|TMX3|54495|thioredoxin-related transmembrane protein 3##BC032325|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832341|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832356|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093792|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093794|TMX3|54495|thioredoxin-related transmembrane protein 3##BC143400|TMX3|54495|thioredoxin-related transmembrane protein 3##AB058733|TMX3|54495|thioredoxin-related transmembrane protein 3	0.993336	CTCF.p2:-13:0.993
chr9	79602656	79602773	reg1004916.p1	12.806	+	AB535152 FJ808772 FJ808773 BC019095 NM_015225 TSC_hg19_v1_chr9_-_79521026	-81762	-	AY196297 NM_001097636	-487166	+	AY196296 NM_001097635	-509458	+	NM_001013735	31856	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	189625	+	TSC_hg19_v1_chr9_+_79792474 AB054005	189794	+	AB535152|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808772|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808773|PRUNE2|158471|prune homolog 2 (Drosophila)##BC019095|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_015225|PRUNE2|158471|prune homolog 2 (Drosophila)##AY196297|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097636|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001013735|FOXB2|442425|forkhead box B2##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)	0.99343	CTCF.p2:6:0.993
chr11	44638530	44638661	reg1005076.p2	12.805	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-51368	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-51430	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-306919	-	NM_130783	147380	+	TSC_hg19_v1_chr11_-_44956087 AF010315	317512	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	333822	-	AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_130783|TSPAN18|90139|tetraspanin 18##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11	1.003888	CTCF.p2:6:0.985
chr1	160261232	160261359	reg1005957.p1	12.805	+	X75535 TSC_hg19_v1_chr1_-_160254924 AK303099 NM_001193644 NM_002857	-6358	-	AB062286 AB528487 BT006879 DQ891417 DQ894591 BC000496 AB018541 TSC_hg19_v1_chr1_-_160254921 AK294940 AK300368	-6380	-	TSC_hg19_v1_chr1_-_160232340 NM_015726	-28958	-	AB385218 TSC_hg19_v1_chr1_-_160313020	51694	-	TSC_hg19_v1_chr1_-_160313044 BC038447	51744	-	TSC_hg19_v1_chr1_-_160313058 AK307953	51764	-	X75535|PEX19|5824|peroxisomal biogenesis factor 19##AK303099|PEX19|5824|peroxisomal biogenesis factor 19##NM_001193644|PEX19|5824|peroxisomal biogenesis factor 19##NM_002857|PEX19|5824|peroxisomal biogenesis factor 19##AB062286|PEX19|5824|peroxisomal biogenesis factor 19##BT006879|PEX19|5824|peroxisomal biogenesis factor 19##DQ891417|PEX19|5824|peroxisomal biogenesis factor 19##DQ894591|PEX19|5824|peroxisomal biogenesis factor 19##BC000496|PEX19|5824|peroxisomal biogenesis factor 19##AB018541|PEX19|5824|peroxisomal biogenesis factor 19##AK300368|PEX19|5824|peroxisomal biogenesis factor 19##NM_015726|DCAF8|50717|DDB1 and CUL4 associated factor 8##BC038447|COPA|1314|coatomer protein complex, subunit alpha##AK307953|COPA|1314|coatomer protein complex, subunit alpha	0.999612	CTCF.p2:-7:1.000
chr7	97464991	97465119	reg1004244.p2	12.805	+	NM_003182 NM_013996 NM_013997 NM_013998 U37529 AK222957 BC018047 X54469	-103703	+	TSC_hg19_v1_chr7_+_96747012 BC022858 AF201933 BC020621	-718025	+	BC028409 NM_020186	-719151	+	AK302242 AK000379 NM_001178077 NM_133436	36395	-	BC008723 TSC_hg19_v1_chr7_-_97501721 BC014621	36649	-	TSC_hg19_v1_chr7_-_97501785 AK302189 M27396 AK316224 NM_001178075 NM_001178076 NM_001673 NM_183356	36740	-	NM_003182|TAC1|6863|tachykinin, precursor 1##NM_013996|TAC1|6863|tachykinin, precursor 1##NM_013997|TAC1|6863|tachykinin, precursor 1##NM_013998|TAC1|6863|tachykinin, precursor 1##U37529|TAC1|6863|tachykinin, precursor 1##AK222957|TAC1|6863|tachykinin, precursor 1##BC018047|TAC1|6863|tachykinin, precursor 1##X54469|TAC1|6863|tachykinin, precursor 1##BC022858|ACN9|57001|ACN9 homolog (S. cerevisiae)##AF201933|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC020621|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)##AK302242|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK000379|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178077|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_133436|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC008723|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC014621|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK302189|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##M27396|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK316224|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178075|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178076|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001673|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_183356|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)	0.994608	CTCF.p2:3:0.995
chr8	142094543	142094659	reg1005303.p1	12.805	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-83345	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-448977	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-573038	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	44136	+	AK128212 NM_001080431	144071	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	169589	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.686647	CTCF.p2:-11:0.687
chr11	95497554	95497690	reg1005948.p1	12.804	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	-533318	-	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-674610	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-697214	+	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	25029	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	25111	-	AK021591 TSC_hg19_v1_chr11_-_95522975 BC026013 NM_144664	25344	-	BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B##AK021591|FAM76B|143684|family with sequence similarity 76, member B##BC026013|FAM76B|143684|family with sequence similarity 76, member B##NM_144664|FAM76B|143684|family with sequence similarity 76, member B	0.906573	CTCF.p2:25:0.907
chr14	67091172	67091327	reg1006785.p1	12.804	+	AJ272343 TSC_hg19_v1_chr14_+_66975224 AK294532 AK297447 BC030016 DQ892463 DQ895675 AB385462 AJ272033	-116024	+	TSC_hg19_v1_chr14_+_66974870 AK315569	-116380	+	TSC_hg19_v1_chr14_+_66974859 AK025169	-116396	+	NM_173526 AK093449 AX748134 AK302154 BC037380 BC050401	564894	+	BC095485 TSC_hg19_v1_chr14_+_67708117 NM_022474 AK291240 AK098373 BC053366 AL832326 BC129933 AL832578 BC037966 AK057160	616914	+	CU692980 TSC_hg19_v1_chr14_-_67826522 BC001411 AF104629 BC031002 AK315784 AK001155 AF145316 AF077614 AF100741 BC025373 NM_015994	735317	-	AJ272343|GPHN|10243|gephyrin##AK294532|GPHN|10243|gephyrin##AK297447|GPHN|10243|gephyrin##BC030016|GPHN|10243|gephyrin##DQ892463|GPHN|10243|gephyrin##DQ895675|GPHN|10243|gephyrin##AJ272033|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##NM_173526|FAM71D|161142|family with sequence similarity 71, member D##AK093449|FAM71D|161142|family with sequence similarity 71, member D##AK302154|FAM71D|161142|family with sequence similarity 71, member D##BC037380|FAM71D|161142|family with sequence similarity 71, member D##BC050401|FAM71D|161142|family with sequence similarity 71, member D##BC095485|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##NM_022474|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK291240|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK098373|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC053366|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832326|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC129933|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832578|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC037966|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	0.971793	CTCF.p2:-10:0.972
chr15	31780892	31781045	reg1004634.p4	12.804	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-161630	+	NM_001243538	-257919	-	GQ502181 HM135791 NM_001252020	-327540	-	AJ430383 NM_130901	166573	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	381861	-	TSC_hg19_v1_chr15_-_32162898 AK126002	381975	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.401771	CTCF.p2:1:0.402
chr2	111569459	111569576	reg1006340.p1	12.804	+	AK300513 NM_001142807 BC022268	-79338	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-133695	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-133874	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	308970	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	1072109	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	1072244	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.999806	CTCF.p2:-9:1.000
chr12	48161054	48161152	reg1005036.p1	12.803	+	AK092448 NM_001098531	-8229	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	-8694	-	AK314688 BC069715 BC069698 BC074763 AX772808 AK300169 AK075446 BC111782 M32402 M36109 NM_001172439 NM_001172440 NM_006025	-41814	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	5931	+	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	52561	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	137698	-	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK314688|ENDOU|8909|endonuclease, polyU-specific##BC069715|ENDOU|8909|endonuclease, polyU-specific##BC069698|ENDOU|8909|endonuclease, polyU-specific##BC074763|ENDOU|8909|endonuclease, polyU-specific##AX772808|ENDOU|8909|endonuclease, polyU-specific##AK300169|ENDOU|8909|endonuclease, polyU-specific##AK075446|ENDOU|8909|endonuclease, polyU-specific##BC111782|ENDOU|8909|endonuclease, polyU-specific##M32402|ENDOU|8909|endonuclease, polyU-specific##M36109|ENDOU|8909|endonuclease, polyU-specific##NM_001172439|ENDOU|8909|endonuclease, polyU-specific##NM_001172440|ENDOU|8909|endonuclease, polyU-specific##NM_006025|ENDOU|8909|endonuclease, polyU-specific##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor	0.39545	CTCF.p2:12:0.395
chr5	157375907	157376032	reg1005269.p1	12.803	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-89879	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-191589	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-205229	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	1150488	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	1150773	-	AK304228 NM_001199382	1258679	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.650575	CTCF.p2:8:0.651
chr13	53183615	53183731	reg1006002.p1	12.802	+	TSC_hg19_v1_chr13_+_53035247 AL136848	-148380	+	EF560732 TSC_hg19_v1_chr13_+_53029614 BC105806 BC066920 BC130296 BC136332 EU832808 GQ129239 HQ258356	-154021	+	NM_001098525 NM_018204 TSC_hg19_v1_chr13_+_53029573 AY062261 AY062262 AK022982 Y15758	-154120	+	TSC_hg19_v1_chr13_+_53191659 NM_001011724 NM_001011725 BC007108 AK123159 BC082242	7964	+	TSC_hg19_v1_chr13_+_53216565 BC108266	32892	+	NM_001130912 NM_006704 TSC_hg19_v1_chr13_+_53227044 AJ344097 AK292128 AY321358 AK302363 AY271314 BC000911 AK291402 AB528309 AF132856 BT009798 DQ890945 DQ894108	43269	+	AL136848|CKAP2|26586|cytoskeleton associated protein 2##EF560732|CKAP2|26586|cytoskeleton associated protein 2##BC105806|CKAP2|26586|cytoskeleton associated protein 2##BC066920|CKAP2|26586|cytoskeleton associated protein 2##BC130296|CKAP2|26586|cytoskeleton associated protein 2##BC136332|CKAP2|26586|cytoskeleton associated protein 2##EU832808|CKAP2|26586|cytoskeleton associated protein 2##GQ129239|CKAP2|26586|cytoskeleton associated protein 2##HQ258356|CKAP2|26586|cytoskeleton associated protein 2##NM_001098525|CKAP2|26586|cytoskeleton associated protein 2##NM_018204|CKAP2|26586|cytoskeleton associated protein 2##AY062261|CKAP2|26586|cytoskeleton associated protein 2##AY062262|CKAP2|26586|cytoskeleton associated protein 2##AK022982|CKAP2|26586|cytoskeleton associated protein 2##Y15758|CKAP2|26586|cytoskeleton associated protein 2##NM_001011724|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001011725|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##AK123159|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##BC082242|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001130912|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##NM_006704|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AJ344097|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK292128|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY321358|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK302363|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY271314|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC000911|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK291402|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF132856|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BT009798|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ890945|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ894108|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	0.990362	CTCF.p2:-17:0.990
chr20	46483639	46483764	reg1005845.p1	12.802	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-68383	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-68949	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-353017	+	AB037836 TSC_hg19_v1_chr20_-_47444291	960585	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	960738	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	1054617	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.690821	CTCF.p2:-16:0.691
chr2	239957101	239957200	reg1003888.p1	12.800	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	-200387	+	TSC_hg19_v1_chr2_+_239335693 AF156777	-621461	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	-621544	+	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	365498	-	TSC_hg19_v1_chr2_-_240322695 BC039904	365548	-	TSC_hg19_v1_chr2_-_240323341 AK308791	366198	-	BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)##AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AK308791|HDAC4|9759|histone deacetylase 4	0.988948	CTCF.p2:7:0.913
chr22	45492279	45492389	reg1005172.p1	12.800	+	TSC_hg19_v1_chr22_-_45405781 AK092243 AX747427 NM_001135862	-86540	-	AB489146 CU012999 CU013287 CU680262 CR456448 BC012187 NM_138415	-86830	-	TSC_hg19_v1_chr22_-_45404785 AK299836 AK297317 AK091480 AX747013 NM_001242450	-87505	-	NM_007172 TSC_hg19_v1_chr22_+_45559808	67437	+	TSC_hg19_v1_chr22_+_45559866 AK314454 BC070133	67532	+	AK304223 TSC_hg19_v1_chr22_+_45559883 BC016055 AF107840 AL389949 AL389950	67686	+	AK092243|PHF21B|112885|PHD finger protein 21B##NM_001135862|PHF21B|112885|PHD finger protein 21B##CU012999|PHF21B|112885|PHD finger protein 21B##CU013287|PHF21B|112885|PHD finger protein 21B##CR456448|PHF21B|112885|PHD finger protein 21B##BC012187|PHF21B|112885|PHD finger protein 21B##NM_138415|PHF21B|112885|PHD finger protein 21B##AK299836|PHF21B|112885|PHD finger protein 21B##AK297317|PHF21B|112885|PHD finger protein 21B##AK091480|PHF21B|112885|PHD finger protein 21B##NM_001242450|PHF21B|112885|PHD finger protein 21B##NM_007172|NUP50|10762|nucleoporin 50kDa##AK314454|NUP50|10762|nucleoporin 50kDa##BC070133|NUP50|10762|nucleoporin 50kDa##AK304223|NUP50|10762|nucleoporin 50kDa##BC016055|NUP50|10762|nucleoporin 50kDa##AF107840|NUP50|10762|nucleoporin 50kDa##AL389949|NUP50|10762|nucleoporin 50kDa##AL389950|NUP50|10762|nucleoporin 50kDa	0.989394	CTCF.p2:3:0.989
chr17	7983376	7983510	reg1005571.p3	12.799	+	TSC_hg19_v1_chr17_+_7982776 AK096086 BC046191	-668	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	-23241	+	AK298095 NM_001039130 NM_001039131 NM_001141 AK292779 AK300554 BC063647 U78294 BC035217 BC033294 AB590334 DQ891345 EU176579 AF468051 AF468052 AF468053 AF468054	-41031	+	AF038461 NM_001139	7577	-	AJ269499 AK313677 NM_021628	38389	-	AK296416 AK299742 NM_001165960	38740	-	AK298095|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039130|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039131|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001141|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK292779|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK300554|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC063647|ALOX15B|247|arachidonate 15-lipoxygenase, type B##U78294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC035217|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC033294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##DQ891345|ALOX15B|247|arachidonate 15-lipoxygenase, type B##EU176579|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468051|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468052|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468053|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468054|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF038461|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##NM_001139|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##AJ269499|ALOXE3|59344|arachidonate lipoxygenase 3##AK313677|ALOXE3|59344|arachidonate lipoxygenase 3##NM_021628|ALOXE3|59344|arachidonate lipoxygenase 3##AK296416|ALOXE3|59344|arachidonate lipoxygenase 3##AK299742|ALOXE3|59344|arachidonate lipoxygenase 3##NM_001165960|ALOXE3|59344|arachidonate lipoxygenase 3	0.923587	CTCF.p2:-9:0.897
chr17	43909620	43909726	reg1006487.p1	12.798	+	BC037967 HM852949 TSC_hg19_v1_chr17_+_43861685 X72304	-47995	+	TSC_hg19_v1_chr17_+_43861628 NM_001145146 NM_001145147 NM_001145148 NM_004382	-48037	+	TSC_hg19_v1_chr17_-_43568133 NM_014798	-341519	-	BC025401 NM_175882 BC022041	12583	+	TSC_hg19_v1_chr17_+_43971655 NM_001123066 NM_001123067 NM_001203251 NM_001203252 NM_005910 NM_016834 NM_016835 NM_016841	62028	+	TSC_hg19_v1_chr17_+_43971919 AK095802 AK299658 AK299704	62253	+	BC037967|CRHR1|1394|corticotropin releasing hormone receptor 1##X72304|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145146|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145147|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145148|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_004382|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_014798|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC025401|IMP5|162540|intramembrane protease 5##NM_175882|IMP5|162540|intramembrane protease 5##BC022041|IMP5|162540|intramembrane protease 5##NM_001123066|MAPT|4137|microtubule-associated protein tau##NM_001123067|MAPT|4137|microtubule-associated protein tau##NM_001203251|MAPT|4137|microtubule-associated protein tau##NM_001203252|MAPT|4137|microtubule-associated protein tau##NM_005910|MAPT|4137|microtubule-associated protein tau##NM_016834|MAPT|4137|microtubule-associated protein tau##NM_016835|MAPT|4137|microtubule-associated protein tau##NM_016841|MAPT|4137|microtubule-associated protein tau##AK095802|MAPT|4137|microtubule-associated protein tau##AK299658|MAPT|4137|microtubule-associated protein tau##AK299704|MAPT|4137|microtubule-associated protein tau	0.915446	CTCF.p2:1:0.915
chr7	73269969	73270103	reg1006321.p1	12.798	+	TSC_hg19_v1_chr7_-_73256847 AK301597 AF534110 NM_152559 AY354928	-13174	-	NM_001305 TSC_hg19_v1_chr7_+_73245327 AK026651 AK124076 BC000671 AB000712	-24765	+	TSC_hg19_v1_chr7_-_73184607 AB000714 BC009083 BC016056 AK313276 NM_001306	-85465	-	AY372053 BC030643 NM_182504 GQ129394 GQ129395 AY372054	5488	+	NM_000501 NM_001081752 NM_001081753 NM_001081754 NM_001081755 AK075554 TSC_hg19_v1_chr7_+_73442441 AK075494	172397	+	TSC_hg19_v1_chr7_+_73442462 AK125511 AK130894	172420	+	AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_001305|CLDN4|1364|claudin 4##AK026651|CLDN4|1364|claudin 4##AK124076|CLDN4|1364|claudin 4##BC000671|CLDN4|1364|claudin 4##AB000712|CLDN4|1364|claudin 4##AB000714|CLDN3|1365|claudin 3##BC009083|CLDN3|1365|claudin 3##BC016056|CLDN3|1365|claudin 3##AK313276|CLDN3|1365|claudin 3##NM_001306|CLDN3|1365|claudin 3##AY372053|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##BC030643|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##NM_182504|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129394|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129395|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##AY372054|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##NM_000501|ELN|2006|elastin##NM_001081752|ELN|2006|elastin##NM_001081753|ELN|2006|elastin##NM_001081754|ELN|2006|elastin##NM_001081755|ELN|2006|elastin##AK075554|ELN|2006|elastin##AK075494|ELN|2006|elastin##AK125511|ELN|2006|elastin##AK130894|ELN|2006|elastin	0.253368	CTCF.p2:17:0.253
chr9	135045319	135045421	reg1005704.p1	12.798	+	AB058760 NM_032536 TSC_hg19_v1_chr9_+_135037469	-7967	+	TSC_hg19_v1_chr9_+_135037083 AY358165	-8279	+	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	-90120	-	TSC_hg19_v1_chr9_-_135230312 AK125448	184860	-	TSC_hg19_v1_chr9_-_135230352 AK307608 BX537849	184978	-	TSC_hg19_v1_chr9_-_135230374 BX538166 NM_015046	185037	-	AB058760|NTNG2|84628|netrin G2##NM_032536|NTNG2|84628|netrin G2##AY358165|NTNG2|84628|netrin G2##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AK125448|SETX|23064|senataxin##AK307608|SETX|23064|senataxin##BX537849|SETX|23064|senataxin##BX538166|SETX|23064|senataxin##NM_015046|SETX|23064|senataxin	0.999514	CTCF.p2:-2:1.000
chr2	211482590	211482715	reg1004826.p1	12.797	+	AK316425 NM_001122634 AK302778 AY317138	-24567	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-61263	+	NM_001122633 AB208800	-140234	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	1920663	-	AK301503 AF130863 NM_016260	2532403	-	BC028936 NM_001079526	2533680	-	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	0.382946	CTCF.p2:-1:0.383
chr12	107796309	107796434	reg1005927.p1	12.796	+	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	-84158	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-308761	-	BC030519 TSC_hg19_v1_chr12_-_107487328 D83702	-309038	-	AK127295 NM_001017523	178262	+	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	283296	+	AK056378 TSC_hg19_v1_chr12_-_108154899	358468	-	BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##BC030519|CRY1|1407|cryptochrome 1 (photolyase-like)##D83702|CRY1|1407|cryptochrome 1 (photolyase-like)##AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK056378|PRDM4|11108|PR domain containing 4	0.345231	CTCF.p2:19:0.345
chr15	40812063	40812195	reg1004467.p1	12.796	+	NM_130468 AB066595 BC049214 TSC_hg19_v1_chr15_+_40763222 BC053633 AF282905 AK074739 CU690606 AF401222 AY358446 BC023653	-48787	+	TSC_hg19_v1_chr15_+_40733353 BC022782 NM_014952	-78766	+	TSC_hg19_v1_chr15_+_40698024 AK315296 BT007145 DQ892577 DQ895793	-114081	+	AK092214 AX747411 AL832032 AK098781 TSC_hg19_v1_chr15_-_40857211	45073	-	TSC_hg19_v1_chr15_-_40857235 AK312842 AK293079 NM_001080791 NM_001080792 NM_052849	45111	-	TSC_hg19_v1_chr15_+_40861497 AK301383	49369	+	NM_130468|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AB066595|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC049214|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC053633|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AF282905|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AK074739|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AF401222|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AY358446|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC023653|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC022782|BAHD1|22893|bromo adjacent homology domain containing 1##NM_014952|BAHD1|22893|bromo adjacent homology domain containing 1##AK315296|IVD|3712|isovaleryl-CoA dehydrogenase##BT007145|IVD|3712|isovaleryl-CoA dehydrogenase##DQ892577|IVD|3712|isovaleryl-CoA dehydrogenase##DQ895793|IVD|3712|isovaleryl-CoA dehydrogenase##AK092214|C15orf57|90416|chromosome 15 open reading frame 57##AL832032|C15orf57|90416|chromosome 15 open reading frame 57##AK098781|C15orf57|90416|chromosome 15 open reading frame 57##AK312842|C15orf57|90416|chromosome 15 open reading frame 57##AK293079|C15orf57|90416|chromosome 15 open reading frame 57##NM_001080791|C15orf57|90416|chromosome 15 open reading frame 57##NM_001080792|C15orf57|90416|chromosome 15 open reading frame 57##NM_052849|C15orf57|90416|chromosome 15 open reading frame 57##AK301383|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	0.978079	CTCF.p2:-13:0.921
chrX	119632023	119632151	reg1005799.p1	12.796	+	TSC_hg19_v1_chrX_-_119603160 BC002965 S79873 U36336 X77196 AK295038 NM_001122606 NM_002294 NM_013995	-28893	-	TSC_hg19_v1_chrX_-_119603152 AK291090 AK293931	-28942	-	TSC_hg19_v1_chrX_-_119603122 J04183	-28987	-	AY365125 AF212995 TSC_hg19_v1_chrX_-_119694635 AK123688	62495	-	TSC_hg19_v1_chrX_-_119694758 BX537787 BX647096 CR936722 NM_001079872	62680	-	TSC_hg19_v1_chrX_-_119694954 BX537641	62831	-	BC002965|LAMP2|3920|lysosomal-associated membrane protein 2##S79873|LAMP2|3920|lysosomal-associated membrane protein 2##U36336|LAMP2|3920|lysosomal-associated membrane protein 2##X77196|LAMP2|3920|lysosomal-associated membrane protein 2##AK295038|LAMP2|3920|lysosomal-associated membrane protein 2##NM_001122606|LAMP2|3920|lysosomal-associated membrane protein 2##NM_002294|LAMP2|3920|lysosomal-associated membrane protein 2##NM_013995|LAMP2|3920|lysosomal-associated membrane protein 2##AK291090|LAMP2|3920|lysosomal-associated membrane protein 2##AK293931|LAMP2|3920|lysosomal-associated membrane protein 2##J04183|LAMP2|3920|lysosomal-associated membrane protein 2##AY365125|CUL4B|8450|cullin 4B##AF212995|CUL4B|8450|cullin 4B##AK123688|CUL4B|8450|cullin 4B##BX537787|CUL4B|8450|cullin 4B##BX647096|CUL4B|8450|cullin 4B##CR936722|CUL4B|8450|cullin 4B##NM_001079872|CUL4B|8450|cullin 4B##BX537641|CUL4B|8450|cullin 4B	0.06197	
chr1	247134793	247134909	reg1005542.p1	12.795	+	AK057394 AY157619 AB059277 NM_015446	-40159	-	TSC_hg19_v1_chr1_-_247054277 AL833491	-80556	-	TSC_hg19_v1_chr1_+_246887713 AK075178 BC026185 CU693152 AF151807	-247194	+	BC023527 AF242519 TSC_hg19_v1_chr1_-_247171319	36461	-	TSC_hg19_v1_chr1_-_247171329 BC041082 AX721130	36480	-	BC055096 TSC_hg19_v1_chr1_-_247171375 NM_001204221 NM_020394	36523	-	AK057394|AHCTF1P1|285116|AT hook containing transcription factor 1 pseudogene 1##AY157619|AHCTF1|25909|AT hook containing transcription factor 1##AB059277|AHCTF1|25909|AT hook containing transcription factor 1##NM_015446|AHCTF1|25909|AT hook containing transcription factor 1##AL833491|AHCTF1|25909|AT hook containing transcription factor 1##AK075178|SCCPDH|51097|saccharopine dehydrogenase (putative)##BC026185|SCCPDH|51097|saccharopine dehydrogenase (putative)##AF151807|SCCPDH|51097|saccharopine dehydrogenase (putative)##BC023527|ZNF695|57116|zinc finger protein 695##BC041082|ZNF695|57116|zinc finger protein 695##BC055096|ZNF695|57116|zinc finger protein 695##NM_001204221|ZNF695|57116|zinc finger protein 695##NM_020394|ZNF695|57116|zinc finger protein 695	0.957154	CTCF.p2:3:0.957
chr17	59914712	59914821	reg1004343.p2	12.795	+	CU687600 BC062710 NM_199290 TSC_hg19_v1_chr17_-_59668583	-246204	-	AF188703 NM_018488 BC136403 BC144062 AB464284	-380938	+	BC142620 TSC_hg19_v1_chr17_+_59529788	-384980	+	BC101472 BC101474 AF360549 TSC_hg19_v1_chr17_-_59940873 NM_032043	26028	-	TSC_hg19_v1_chr17_-_60005339 AB033113 AK308307 AK299032 AL136800 NM_020748	90576	-	TSC_hg19_v1_chr17_-_60142600 BC140891 AF117754 NM_005121	227861	-	BC062710|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##NM_199290|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##AF188703|TBX4|9496|T-box 4##NM_018488|TBX4|9496|T-box 4##BC136403|TBX4|9496|T-box 4##BC144062|TBX4|9496|T-box 4##BC142620|TBX4|9496|T-box 4##BC101472|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##BC101474|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AF360549|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_032043|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AB033113|INTS2|57508|integrator complex subunit 2##AK308307|INTS2|57508|integrator complex subunit 2##AK299032|INTS2|57508|integrator complex subunit 2##AL136800|INTS2|57508|integrator complex subunit 2##NM_020748|INTS2|57508|integrator complex subunit 2##BC140891|MED13|9969|mediator complex subunit 13##AF117754|MED13|9969|mediator complex subunit 13##NM_005121|MED13|9969|mediator complex subunit 13	0.389178	CTCF.p2:11:0.389
chr2	73391014	73391131	reg1004902.p2	12.795	+	TSC_hg19_v1_chr2_-_73340101 AF334812 AB020664 NM_015470	-50963	-	TSC_hg19_v1_chr2_-_73340066 BC035013	-51008	-	DQ890991 DQ894168 TSC_hg19_v1_chr2_-_73339998 BC099902	-51088	-	AK295936 NM_001134462 AK316410	38335	+	TSC_hg19_v1_chr2_+_73441372 NM_006062 AK300779 AK301809 BC073806 AB527925 U50383	50333	+	TSC_hg19_v1_chr2_-_73460365 AY358605 BC005069 NM_032319 AK312077	69292	-	AF334812|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##AB020664|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##NM_015470|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##BC035013|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##DQ890991|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##DQ894168|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##BC099902|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##AK295936|NOTO|344022|notochord homeobox##NM_001134462|NOTO|344022|notochord homeobox##AK316410|NOTO|344022|notochord homeobox##NM_006062|SMYD5|10322|SMYD family member 5##AK300779|SMYD5|10322|SMYD family member 5##AK301809|SMYD5|10322|SMYD family member 5##BC073806|SMYD5|10322|SMYD family member 5##U50383|SMYD5|10322|SMYD family member 5##AY358605|PRADC1|84279|protease-associated domain containing 1##BC005069|PRADC1|84279|protease-associated domain containing 1##NM_032319|PRADC1|84279|protease-associated domain containing 1##AK312077|PRADC1|84279|protease-associated domain containing 1	0.987536	CTCF.p2:1:0.988
chr6	137114207	137114367	reg1005307.p3	12.795	+	TSC_hg19_v1_chr6_-_137113721 AB209093	-545	-	TSC_hg19_v1_chr6_-_137113641 NM_005923 U67156 BC088829	-647	-	BC054503 TSC_hg19_v1_chr6_-_137113611	-677	-	TSC_hg19_v1_chr6_+_137143699 NM_000288 BC031606 U88871	29415	+	TSC_hg19_v1_chr6_+_137143749 U76560 BC006268 AB529018 CR542054 CR542076 CU675317 CU689196	29488	+	AK316095 BC087842 NM_001008783 AK295424	129166	+	AB209093|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##NM_005923|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##U67156|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##BC088829|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##BC054503|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##NM_000288|PEX7|5191|peroxisomal biogenesis factor 7##BC031606|PEX7|5191|peroxisomal biogenesis factor 7##U88871|PEX7|5191|peroxisomal biogenesis factor 7##U76560|PEX7|5191|peroxisomal biogenesis factor 7##BC006268|PEX7|5191|peroxisomal biogenesis factor 7##CR542054|PEX7|5191|peroxisomal biogenesis factor 7##CR542076|PEX7|5191|peroxisomal biogenesis factor 7##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3	0.068856	
chr8	31109712	31109819	reg1005430.p1	12.795	+	TSC_hg19_v1_chr8_+_30891325 AF091214	-218474	+	AF195513 AY077841 NM_001015508	-218535	-	NM_000553	-218988	+	NM_013962	387502	+	AK298132 NM_001160002 NM_001160004 NM_001160005 NM_001160007 NM_001160008 NM_004495 NM_013956 NM_013957 NM_013958 NM_013960 NM_013964 M94168 BC006492 TSC_hg19_v1_chr8_+_32405834 M94167 AF026146 AK097005 AK290730 L12261	1296024	+	AK289927 NM_013959	1394485	+	AF091214|WRN|7486|Werner syndrome, RecQ helicase-like##AF195513|PURG|29942|purine-rich element binding protein G##AY077841|PURG|29942|purine-rich element binding protein G##NM_001015508|PURG|29942|purine-rich element binding protein G##NM_000553|WRN|7486|Werner syndrome, RecQ helicase-like##NM_013962|NRG1|3084|neuregulin 1##AK298132|NRG1|3084|neuregulin 1##NM_001160002|NRG1|3084|neuregulin 1##NM_001160004|NRG1|3084|neuregulin 1##NM_001160005|NRG1|3084|neuregulin 1##NM_001160007|NRG1|3084|neuregulin 1##NM_001160008|NRG1|3084|neuregulin 1##NM_004495|NRG1|3084|neuregulin 1##NM_013956|NRG1|3084|neuregulin 1##NM_013957|NRG1|3084|neuregulin 1##NM_013958|NRG1|3084|neuregulin 1##NM_013960|NRG1|3084|neuregulin 1##NM_013964|NRG1|3084|neuregulin 1##M94168|NRG1|3084|neuregulin 1##BC006492|NRG1|3084|neuregulin 1##M94167|NRG1|3084|neuregulin 1##AF026146|NRG1|3084|neuregulin 1##AK097005|NRG1|3084|neuregulin 1##AK290730|NRG1|3084|neuregulin 1##L12261|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1	0.837126	CTCF.p2:-2:0.837
chr11	61544077	61544177	reg1004833.p1	12.794	+	AF086762 NM_013279	-21267	+	TSC_hg19_v1_chr11_+_61520107 AB023171 NM_001127392 AB385408	-24020	+	TSC_hg19_v1_chr11_+_61447896 BC150176 BC150195 NM_006133 AB014559 BC152453	-96246	+	TSC_hg19_v1_chr11_-_61560064 BC002750 AF085986 AK291683 AF086763 BC015968 AF070661 NM_014206	15943	-	NM_004111 X76771	16001	+	TSC_hg19_v1_chr11_+_61560382 AK301743 BC000323	16245	+	AF086762|C11orf9|745|chromosome 11 open reading frame 9##NM_013279|C11orf9|745|chromosome 11 open reading frame 9##AB023171|C11orf9|745|chromosome 11 open reading frame 9##NM_001127392|C11orf9|745|chromosome 11 open reading frame 9##BC150176|DAGLA|747|diacylglycerol lipase, alpha##BC150195|DAGLA|747|diacylglycerol lipase, alpha##NM_006133|DAGLA|747|diacylglycerol lipase, alpha##AB014559|DAGLA|747|diacylglycerol lipase, alpha##BC152453|DAGLA|747|diacylglycerol lipase, alpha##BC002750|C11orf10|746|chromosome 11 open reading frame 10##AF085986|C11orf10|746|chromosome 11 open reading frame 10##AK291683|C11orf10|746|chromosome 11 open reading frame 10##AF086763|C11orf10|746|chromosome 11 open reading frame 10##BC015968|C11orf10|746|chromosome 11 open reading frame 10##AF070661|C11orf10|746|chromosome 11 open reading frame 10##NM_014206|C11orf10|746|chromosome 11 open reading frame 10##NM_004111|FEN1|2237|flap structure-specific endonuclease 1##X76771|FEN1|2237|flap structure-specific endonuclease 1##AK301743|FEN1|2237|flap structure-specific endonuclease 1##BC000323|FEN1|2237|flap structure-specific endonuclease 1	0.998522	CTCF.p2:7:0.999
chr7	147781274	147781386	reg1004948.p2	12.794	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-1967446	+	NM_014141	-1967878	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-3248194	-	TSC_hg19_v1_chr7_+_148036552 CR933671	255235	+	BC021251 NM_145304	506326	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	614610	+	AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##CR933671|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1	0.998144	CTCF.p2:7:0.998
chr16	10608587	10608701	reg1004081.p1	12.792	+	NM_024997 BC137079 BC144468	-85904	+	AK093414 AX748112 TSC_hg19_v1_chr16_+_10479917 AK296565 AK299040 BC033891 BC041882	-128727	+	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	-331967	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	65846	-	HQ258441 BC130336 BC130338 AK057433 NM_144674	180121	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	229060	+	NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1	0.998491	CTCF.p2:-4:0.998
chr17	70982367	70982525	reg1004940.p2	12.792	+	AK000477 TSC_hg19_v1_chr17_-_70588944	-393503	-	TSC_hg19_v1_chr17_+_70117187 BC007951	-865206	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-865276	+	AF331643 TSC_hg19_v1_chr17_-_71088816	106370	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	106377	-	BC035631 TSC_hg19_v1_chr17_-_71088831	106385	-	AK000477|LOC100499467|100499467|uncharacterized LOC100499467##BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.883908	CTCF.p2:-11:0.884
chr18	11519212	11519337	reg1005954.p1	12.791	+	NM_022068	-370514	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-993177	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-993218	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	169938	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	232241	+	L10665 TSC_hg19_v1_chr18_+_11752245	232941	+	NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.99855	CTCF.p2:1:0.999
chr5	131343640	131343783	reg1005261.p2	12.791	+	TSC_hg19_v1_chr5_-_131132740 NM_001008738 NM_133372	-210976	-	AK292473 TSC_hg19_v1_chr5_-_131132711	-211000	-	TSC_hg19_v1_chr5_-_131132694 BC001956	-211012	-	AB385389 AB020644 TSC_hg19_v1_chr5_-_131347331 AK294291 NM_001009185 NM_001205247 NM_015256	3590	-	AK314452 BC047453 NM_001205248 NM_001205251 BC026161 NM_001205250 DQ655980	3982	-	M20137 NM_000588 BC069472 BC066272 BC066273 BC066274 BC066275 BC066276 M17115 M14743 CU686832 HQ448457	52661	+	NM_001008738|FNIP1|96459|folliculin interacting protein 1##NM_133372|FNIP1|96459|folliculin interacting protein 1##AK292473|FNIP1|96459|folliculin interacting protein 1##BC001956|FNIP1|96459|folliculin interacting protein 1##AB020644|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##AK294291|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001009185|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205247|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_015256|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##AK314452|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC047453|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205248|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205251|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC026161|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205250|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##DQ655980|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##M20137|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##NM_000588|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC069472|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066272|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066273|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066274|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066275|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066276|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M17115|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M14743|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##HQ448457|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)	0.998311	CTCF.p2:10:0.998
chr7	95500537	95500642	reg1004621.p1	12.791	+	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	-98681	+	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	-274726	-	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-385296	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	450813	-	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	632238	-	CR456887 TSC_hg19_v1_chr7_-_96339159 AK309241 BC032782	838529	-	NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280##CR456887|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##AK309241|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##BC032782|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1	0.995634	CTCF.p2:0:0.996
chr7	45962948	45963064	reg1006068.p1	12.790	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-2200	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-29872	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-34901	+	TSC_hg19_v1_chr7_-_47579207 BC071791	1616203	-	TSC_hg19_v1_chr7_-_47621681 CR749644	1658657	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	1658777	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.0	
chr9	38363138	38363271	reg1003688.p2	12.790	+	X75342 NM_003028 TSC_hg19_v1_chr9_-_38069225 BC094765	-293963	-	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	-294063	-	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	-458838	-	TSC_hg19_v1_chr9_+_38392669 NM_000692	29469	+	TSC_hg19_v1_chr9_+_38392698 AK313344	29493	+	TSC_hg19_v1_chr9_+_38392760 AK297020 BC001619 AK225950	29538	+	X75342|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_003028|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B##AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK313344|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK297020|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##BC001619|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK225950|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1	0.815717	CTCF.p2:8:0.816
chr1	52000789	52000917	reg1005064.p1	12.789	+	NM_001981 Z29064 TSC_hg19_v1_chr1_-_51985031	-15829	-	DQ367924 AB384758 BC054006 TSC_hg19_v1_chr1_-_51984939 AK129853 U07707 AK313396	-15930	-	AK090936 AX746691 AK308128 BX647676 NM_001159969	-113087	-	NM_024586 NM_148906 NM_148908 NM_148909	81692	+	TSC_hg19_v1_chr1_+_52082763 AK056617 AK091703 AK027535 AF392445 AY178997	81914	+	TSC_hg19_v1_chr1_+_52195487 NM_148904 NM_148905 NM_148907 AK315167	194624	+	NM_001981|EPS15|2060|epidermal growth factor receptor pathway substrate 15##Z29064|EPS15|2060|epidermal growth factor receptor pathway substrate 15##DQ367924|EPS15|2060|epidermal growth factor receptor pathway substrate 15##BC054006|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK129853|EPS15|2060|epidermal growth factor receptor pathway substrate 15##U07707|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK313396|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15##BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15##NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15##NM_024586|OSBPL9|114883|oxysterol binding protein-like 9##NM_148906|OSBPL9|114883|oxysterol binding protein-like 9##NM_148908|OSBPL9|114883|oxysterol binding protein-like 9##NM_148909|OSBPL9|114883|oxysterol binding protein-like 9##AK056617|OSBPL9|114883|oxysterol binding protein-like 9##AK091703|OSBPL9|114883|oxysterol binding protein-like 9##AK027535|OSBPL9|114883|oxysterol binding protein-like 9##AF392445|OSBPL9|114883|oxysterol binding protein-like 9##AY178997|OSBPL9|114883|oxysterol binding protein-like 9##NM_148904|OSBPL9|114883|oxysterol binding protein-like 9##NM_148905|OSBPL9|114883|oxysterol binding protein-like 9##NM_148907|OSBPL9|114883|oxysterol binding protein-like 9##AK315167|OSBPL9|114883|oxysterol binding protein-like 9	0.972717	CTCF.p2:11:0.973
chr7	24421642	24421780	reg1007314.p1	12.789	+	BC029497 NM_000905 AK312156 K01911 M15789	-97868	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-671795	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	-701888	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	191377	+	TSC_hg19_v1_chr7_-_24797042 BC099911	375326	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	375356	-	BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5	0.65052	CTCF.p2:18:0.651
chrY	2461431	2461550	reg1004639.p1	12.789	+	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	-92502	-	BC015030 NM_001171135	-92911	-	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	-777487	+	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	97822	+	S56543 S53156 AB464705 EU446863 BC074923 BC074924 L10101 NM_003140	194144	-	TSC_hg19_v1_chrY_+_2709618 NM_001008	248119	+	BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC015030|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule##S56543|SRY|6736|sex determining region Y##S53156|SRY|6736|sex determining region Y##EU446863|SRY|6736|sex determining region Y##BC074923|SRY|6736|sex determining region Y##BC074924|SRY|6736|sex determining region Y##L10101|SRY|6736|sex determining region Y##NM_003140|SRY|6736|sex determining region Y##NM_001008|RPS4Y1|6192|ribosomal protein S4, Y-linked 1	0.7928	CTCF.p2:43:0.793
chr1	176660906	176661023	reg1004970.p1	12.788	+	AF342989 AF342990 BC062665 BC104644 NM_020318 NM_021936 BC152552	-228652	+	AF527539 TSC_hg19_v1_chr1_-_176176377	-484588	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	-484595	-	BC142697 AB006627 BC146795 TSC_hg19_v1_chr1_-_177133827	472861	-	AK307820 AK295126 BC032870 BC049377 TSC_hg19_v1_chr1_-_177134004 NM_004319 NM_207108	473022	-	TSC_hg19_v1_chr1_-_177134042 AK309094	473111	-	AF342989|PAPPA2|60676|pappalysin 2##AF342990|PAPPA2|60676|pappalysin 2##BC062665|PAPPA2|60676|pappalysin 2##BC104644|PAPPA2|60676|pappalysin 2##NM_020318|PAPPA2|60676|pappalysin 2##NM_021936|PAPPA2|60676|pappalysin 2##BC152552|PAPPA2|60676|pappalysin 2##AF527539|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2##BC142697|ASTN1|460|astrotactin 1##AB006627|ASTN1|460|astrotactin 1##BC146795|ASTN1|460|astrotactin 1##AK307820|ASTN1|460|astrotactin 1##AK295126|ASTN1|460|astrotactin 1##BC032870|ASTN1|460|astrotactin 1##BC049377|ASTN1|460|astrotactin 1##NM_004319|ASTN1|460|astrotactin 1##NM_207108|ASTN1|460|astrotactin 1##AK309094|ASTN1|460|astrotactin 1	0.987299	CTCF.p2:0:0.987
chr15	89750193	89750331	reg1007560.p1	12.788	+	AL109729 TSC_hg19_v1_chr15_+_89739320	-10984	+	TSC_hg19_v1_chr15_+_89631738 X12433	-118525	+	TSC_hg19_v1_chr15_+_89631708 AL110291 AK222841 AK290340 AK223083 AK296827	-118559	+	AK312457 BC004199 NM_000326 DQ980611	14644	-	TSC_hg19_v1_chr15_+_89787197 NM_001113378 NM_018193 BC146804	36931	+	TSC_hg19_v1_chr15_+_89787255 AK055176 BC140769 BC144483 BC004277	36988	+	AL109729|ABHD2|11057|abhydrolase domain containing 2##X12433|ABHD2|11057|abhydrolase domain containing 2##AL110291|ABHD2|11057|abhydrolase domain containing 2##AK222841|ABHD2|11057|abhydrolase domain containing 2##AK290340|ABHD2|11057|abhydrolase domain containing 2##AK223083|ABHD2|11057|abhydrolase domain containing 2##AK296827|ABHD2|11057|abhydrolase domain containing 2##AK312457|RLBP1|6017|retinaldehyde binding protein 1##BC004199|RLBP1|6017|retinaldehyde binding protein 1##NM_000326|RLBP1|6017|retinaldehyde binding protein 1##DQ980611|RLBP1|6017|retinaldehyde binding protein 1##NM_001113378|FANCI|55215|Fanconi anemia, complementation group I##NM_018193|FANCI|55215|Fanconi anemia, complementation group I##BC146804|FANCI|55215|Fanconi anemia, complementation group I##AK055176|FANCI|55215|Fanconi anemia, complementation group I##BC140769|FANCI|55215|Fanconi anemia, complementation group I##BC144483|FANCI|55215|Fanconi anemia, complementation group I##BC004277|FANCI|55215|Fanconi anemia, complementation group I	0.999802	CTCF.p2:-6:1.000
chr17	74620104	74620209	reg1005060.p2	12.788	+	NM_006456 TSC_hg19_v1_chr17_-_74582222	-37969	-	TSC_hg19_v1_chr17_-_74581934 AK225943	-38215	-	TSC_hg19_v1_chr17_-_74581928 BT019972 BC040455 AJ251053 U14550	-38251	-	AY096001 CU692632 BC022462 TSC_hg19_v1_chr17_-_74639807 AK310906 AY358918 BC063830 NM_018414	19650	-	TSC_hg19_v1_chr17_-_74707048 AB590448 NM_001008528 NM_001008529 NM_198530 BC094776	86876	-	TSC_hg19_v1_chr17_-_74707067 BC053983	86944	-	NM_006456|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##AK225943|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##BT019972|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##BC040455|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##AJ251053|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##U14550|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##AY096001|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##BC022462|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##AK310906|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##AY358918|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##BC063830|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##NM_018414|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##NM_001008528|MXRA7|439921|matrix-remodelling associated 7##NM_001008529|MXRA7|439921|matrix-remodelling associated 7##NM_198530|MXRA7|439921|matrix-remodelling associated 7##BC094776|MXRA7|439921|matrix-remodelling associated 7##BC053983|MXRA7|439921|matrix-remodelling associated 7	0.605111	CTCF.p2:1:0.605
chr5	56196792	56196932	reg1004743.p2	12.788	+	TSC_hg19_v1_chr5_+_56111395 AF042838	-85444	+	TSC_hg19_v1_chr5_+_56111375 AK307828	-85498	+	NM_005921	-85963	+	NM_001171990 NM_153706 BC036528 AK309152	8270	+	TSC_hg19_v1_chr5_-_56247951 BX537798 BX640907 CR749246 CR749805 BX647359 BX648294 BC041348 NM_152622	51082	-	TSC_hg19_v1_chr5_+_56469684 AK311625 NM_001203246 NM_022913	272852	+	AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##NM_001171990|C5orf35|133383|chromosome 5 open reading frame 35##NM_153706|C5orf35|133383|chromosome 5 open reading frame 35##BC036528|C5orf35|133383|chromosome 5 open reading frame 35##AK309152|C5orf35|133383|chromosome 5 open reading frame 35##BX537798|MIER3|166968|mesoderm induction early response 1, family member 3##BX640907|MIER3|166968|mesoderm induction early response 1, family member 3##CR749246|MIER3|166968|mesoderm induction early response 1, family member 3##CR749805|MIER3|166968|mesoderm induction early response 1, family member 3##BX647359|MIER3|166968|mesoderm induction early response 1, family member 3##BX648294|MIER3|166968|mesoderm induction early response 1, family member 3##BC041348|MIER3|166968|mesoderm induction early response 1, family member 3##NM_152622|MIER3|166968|mesoderm induction early response 1, family member 3##AK311625|GPBP1|65056|GC-rich promoter binding protein 1##NM_001203246|GPBP1|65056|GC-rich promoter binding protein 1##NM_022913|GPBP1|65056|GC-rich promoter binding protein 1	0.996656	CTCF.p2:-9:0.997
chr13	95014764	95014883	reg1004893.p1	12.786	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	-1135396	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-2963919	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-6689954	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	117003	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	233606	-	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	233673	-	NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase	0.999646	CTCF.p2:14:1.000
chr4	114315977	114316139	reg1005371.p1	12.786	+	TSC_hg19_v1_chr4_+_114214102 AK294720	-101939	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	-345224	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-576757	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	366223	-	TSC_hg19_v1_chr4_-_114682341 AK294517	366298	-	BC022558 TSC_hg19_v1_chr4_-_114682567	366508	-	AK294720|ANK2|287|ankyrin 2, neuronal##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK294517|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC022558|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.999761	CTCF.p2:-4:1.000
chr5	56434064	56434186	reg1005626.p1	12.786	+	TSC_hg19_v1_chr5_-_56247951 BX537798 BX640907 CR749246 CR749805 BX647359 BX648294 BC041348 NM_152622	-186181	-	NM_001171990 NM_153706 BC036528 AK309152	-228993	+	TSC_hg19_v1_chr5_+_56111395 AF042838	-322707	+	TSC_hg19_v1_chr5_+_56469684 AK311625 NM_001203246 NM_022913	35589	+	TSC_hg19_v1_chr5_+_56469911 AL161991 AY226828	35772	+	BC113004 NM_001127235	37148	+	BX537798|MIER3|166968|mesoderm induction early response 1, family member 3##BX640907|MIER3|166968|mesoderm induction early response 1, family member 3##CR749246|MIER3|166968|mesoderm induction early response 1, family member 3##CR749805|MIER3|166968|mesoderm induction early response 1, family member 3##BX647359|MIER3|166968|mesoderm induction early response 1, family member 3##BX648294|MIER3|166968|mesoderm induction early response 1, family member 3##BC041348|MIER3|166968|mesoderm induction early response 1, family member 3##NM_152622|MIER3|166968|mesoderm induction early response 1, family member 3##NM_001171990|C5orf35|133383|chromosome 5 open reading frame 35##NM_153706|C5orf35|133383|chromosome 5 open reading frame 35##BC036528|C5orf35|133383|chromosome 5 open reading frame 35##AK309152|C5orf35|133383|chromosome 5 open reading frame 35##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK311625|GPBP1|65056|GC-rich promoter binding protein 1##NM_001203246|GPBP1|65056|GC-rich promoter binding protein 1##NM_022913|GPBP1|65056|GC-rich promoter binding protein 1##AL161991|GPBP1|65056|GC-rich promoter binding protein 1##AY226828|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1	0.964592	CTCF.p2:-11:0.965
chr8	32412334	32412457	reg1005979.p1	12.786	+	AK298132 NM_001160002 NM_001160004 NM_001160005 NM_001160007 NM_001160008 NM_004495 NM_013956 NM_013957 NM_013958 NM_013960 NM_013964 M94168 BC006492 TSC_hg19_v1_chr8_+_32405834 M94167 AF026146 AK097005 AK290730 L12261	-6606	+	NM_013962	-915128	+	TSC_hg19_v1_chr8_+_30891325 AF091214	-1521104	+	AK289927 NM_013959	91855	+	NM_001159996 AK293270 AK293240	166997	+	TSC_hg19_v1_chr8_+_32785485 BC034319	373094	+	AK298132|NRG1|3084|neuregulin 1##NM_001160002|NRG1|3084|neuregulin 1##NM_001160004|NRG1|3084|neuregulin 1##NM_001160005|NRG1|3084|neuregulin 1##NM_001160007|NRG1|3084|neuregulin 1##NM_001160008|NRG1|3084|neuregulin 1##NM_004495|NRG1|3084|neuregulin 1##NM_013956|NRG1|3084|neuregulin 1##NM_013957|NRG1|3084|neuregulin 1##NM_013958|NRG1|3084|neuregulin 1##NM_013960|NRG1|3084|neuregulin 1##NM_013964|NRG1|3084|neuregulin 1##M94168|NRG1|3084|neuregulin 1##BC006492|NRG1|3084|neuregulin 1##M94167|NRG1|3084|neuregulin 1##AF026146|NRG1|3084|neuregulin 1##AK097005|NRG1|3084|neuregulin 1##AK290730|NRG1|3084|neuregulin 1##L12261|NRG1|3084|neuregulin 1##NM_013962|NRG1|3084|neuregulin 1##AF091214|WRN|7486|Werner syndrome, RecQ helicase-like##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1##NM_001159996|NRG1|3084|neuregulin 1##AK293270|NRG1|3084|neuregulin 1##AK293240|NRG1|3084|neuregulin 1	0.985625	CTCF.p2:-13:0.986
chr15	30859219	30859354	reg1004792.p2	12.785	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-173574	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-744663	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-744944	-	TSC_hg19_v1_chr15_+_30918372 BC071990	59100	+	BC105788 NM_001039841	59592	+	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	336788	+	BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1	1.164897	CTCF.p2:-6:1.000
chr1	92392953	92393081	reg1005065.p1	12.785	+	L07594 NM_001195684	-21459	-	AK225799 TSC_hg19_v1_chr1_-_92351709 NM_001195683 NM_003243	-41270	-	AK291345 BC126116 BC136295 BC143869 TSC_hg19_v1_chr1_-_92351559	-41500	-	AY338951 NM_001242805 NM_001242806 NM_001242807 NM_001242808 NM_001242810 NM_207189 AK316442	21910	+	NM_001726 AF019085	24712	+	TSC_hg19_v1_chr1_+_92495532 NM_173567 BC041475 AK074822 CU691994	102543	+	L07594|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195684|TGFBR3|7049|transforming growth factor, beta receptor III##AK225799|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195683|TGFBR3|7049|transforming growth factor, beta receptor III##NM_003243|TGFBR3|7049|transforming growth factor, beta receptor III##AK291345|TGFBR3|7049|transforming growth factor, beta receptor III##BC126116|TGFBR3|7049|transforming growth factor, beta receptor III##BC136295|TGFBR3|7049|transforming growth factor, beta receptor III##BC143869|TGFBR3|7049|transforming growth factor, beta receptor III##AY338951|BRDT|676|bromodomain, testis-specific##NM_001242805|BRDT|676|bromodomain, testis-specific##NM_001242806|BRDT|676|bromodomain, testis-specific##NM_001242807|BRDT|676|bromodomain, testis-specific##NM_001242808|BRDT|676|bromodomain, testis-specific##NM_001242810|BRDT|676|bromodomain, testis-specific##NM_207189|BRDT|676|bromodomain, testis-specific##AK316442|BRDT|676|bromodomain, testis-specific##NM_001726|BRDT|676|bromodomain, testis-specific##AF019085|BRDT|676|bromodomain, testis-specific##NM_173567|EPHX4|253152|epoxide hydrolase 4##BC041475|EPHX4|253152|epoxide hydrolase 4##AK074822|EPHX4|253152|epoxide hydrolase 4	0.991243	CTCF.p2:16:0.991
chr3	190602147	190602263	reg1007139.p1	12.785	+	NM_001146686	-21741	-	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	-370328	+	CU687168 BC071780 AY358607 NM_207316	-434575	-	AY398681 AY573933 BC128106 BC128107 NM_198184	328116	+	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	444961	+	AK090630 AX746546 NM_198152	446119	-	NM_001146686|GMNC|647309|geminin coiled-coil domain containing##NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207##AY398681|OSTN|344901|osteocrin##AY573933|OSTN|344901|osteocrin##BC128106|OSTN|344901|osteocrin##BC128107|OSTN|344901|osteocrin##NM_198184|OSTN|344901|osteocrin##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing	0.029436	
chr4	16918502	16918630	reg1005573.p1	12.785	+	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	-18181	-	AK226029 TSC_hg19_v1_chr4_-_16900258	-18307	-	AK300119 AB463834 DQ891981 DQ895171 AK312881 TSC_hg19_v1_chr4_-_16900210 AF068651 AF047337 AF064492 AF064493 BC034019	-18440	-	AB528218 AM393718 DQ891926 DQ895113 CU674280 TSC_hg19_v1_chr4_-_17513714 X04882 BC000576 AK124382 AK296622 AK223437 AK289773 NM_000320	595200	-	BC127863 NM_001079827	598221	+	TSC_hg19_v1_chr4_+_17578852 NM_015907	660316	+	AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2##AK226029|LDB2|9079|LIM domain binding 2##AK300119|LDB2|9079|LIM domain binding 2##DQ891981|LDB2|9079|LIM domain binding 2##DQ895171|LDB2|9079|LIM domain binding 2##AK312881|LDB2|9079|LIM domain binding 2##AF068651|LDB2|9079|LIM domain binding 2##AF047337|LDB2|9079|LIM domain binding 2##AF064492|LDB2|9079|LIM domain binding 2##AF064493|LDB2|9079|LIM domain binding 2##BC034019|LDB2|9079|LIM domain binding 2##AM393718|QDPR|5860|quinoid dihydropteridine reductase##DQ891926|QDPR|5860|quinoid dihydropteridine reductase##DQ895113|QDPR|5860|quinoid dihydropteridine reductase##X04882|QDPR|5860|quinoid dihydropteridine reductase##BC000576|QDPR|5860|quinoid dihydropteridine reductase##AK124382|QDPR|5860|quinoid dihydropteridine reductase##AK296622|QDPR|5860|quinoid dihydropteridine reductase##AK223437|QDPR|5860|quinoid dihydropteridine reductase##AK289773|QDPR|5860|quinoid dihydropteridine reductase##NM_000320|QDPR|5860|quinoid dihydropteridine reductase##BC127863|CLRN2|645104|clarin 2##NM_001079827|CLRN2|645104|clarin 2##NM_015907|LAP3|51056|leucine aminopeptidase 3	0.971695	CTCF.p2:-16:0.972
chr6	5303615	5303729	reg1005621.p1	12.785	+	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-41982	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-42410	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-42506	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	703469	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	704025	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	1017213	-	NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide	0.992465	CTCF.p2:8:0.992
chr12	54645589	54645717	reg1007012.p1	12.783	+	BC088352 BC000417 TSC_hg19_v1_chr12_-_54582755 AK091468 AX747003 NM_001243789 NM_001243790 BC105607 AK001789 AK001235 AK222473 AK290274 NM_001243787 NM_001243788 NM_001243791 NM_014311	-62967	-	BC030212 TSC_hg19_v1_chr12_-_54541132	-104572	-	TSC_hg19_v1_chr12_+_54519846 BC009385	-125795	+	BC006821 NM_001127322 TSC_hg19_v1_chr12_-_54653330	7671	-	NM_001127321 TSC_hg19_v1_chr12_-_54653370	7718	-	TSC_hg19_v1_chr12_-_54673880 L07515 S62077	28229	-	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC009385|LOC400043|400043|uncharacterized LOC400043##BC006821|CBX5|23468|chromobox homolog 5##NM_001127322|CBX5|23468|chromobox homolog 5##NM_001127321|CBX5|23468|chromobox homolog 5##L07515|CBX5|23468|chromobox homolog 5##S62077|CBX5|23468|chromobox homolog 5	0.898815	CTCF.p2:6:0.899
chr17	4613289	4613423	reg1005186.p2	12.783	+	TSC_hg19_v1_chr17_-_4607431 AK299084 NM_014389	-5825	-	TSC_hg19_v1_chr17_-_4607422 AK291163	-5931	-	TSC_hg19_v1_chr17_-_4607415 AK293838	-5939	-	TSC_hg19_v1_chr17_+_4613926 NM_004313 NM_199004 AK297059 AK097542	498	+	TSC_hg19_v1_chr17_+_4613946 BC007427 BC067368 AF106941 CR749218 AB209786 AK290951 AK297181 BC095450 DQ893226 DQ896556 EU176778 AB527599 CR450310 DQ664180 EU883572 Z11501 BC039066	622	+	BC070377 NM_001001683 TSC_hg19_v1_chr17_+_4634722 AF161414	21380	+	AK299084|PELP1|27043|proline, glutamate and leucine rich protein 1##NM_014389|PELP1|27043|proline, glutamate and leucine rich protein 1##AK291163|PELP1|27043|proline, glutamate and leucine rich protein 1##AK293838|PELP1|27043|proline, glutamate and leucine rich protein 1##NM_004313|ARRB2|409|arrestin, beta 2##NM_199004|ARRB2|409|arrestin, beta 2##AK297059|ARRB2|409|arrestin, beta 2##AK097542|ARRB2|409|arrestin, beta 2##BC007427|ARRB2|409|arrestin, beta 2##BC067368|ARRB2|409|arrestin, beta 2##AF106941|ARRB2|409|arrestin, beta 2##CR749218|ARRB2|409|arrestin, beta 2##AB209786|ARRB2|409|arrestin, beta 2##AK290951|ARRB2|409|arrestin, beta 2##AK297181|ARRB2|409|arrestin, beta 2##BC095450|ARRB2|409|arrestin, beta 2##DQ893226|ARRB2|409|arrestin, beta 2##DQ896556|ARRB2|409|arrestin, beta 2##EU176778|ARRB2|409|arrestin, beta 2##CR450310|ARRB2|409|arrestin, beta 2##DQ664180|ARRB2|409|arrestin, beta 2##EU883572|ARRB2|409|arrestin, beta 2##Z11501|ARRB2|409|arrestin, beta 2##BC039066|ARRB2|409|arrestin, beta 2##BC070377|MED11|400569|mediator complex subunit 11##NM_001001683|MED11|400569|mediator complex subunit 11##AF161414|MED11|400569|mediator complex subunit 11	0.063893	
chr8	10834803	10834893	reg1004856.p2	12.783	+	TSC_hg19_v1_chr8_-_10697386 AF205718 AF418553 AJ344104	-137439	-	AY238941 AY523566 BC093762 BC143382 NM_017884 TSC_hg19_v1_chr8_-_10697379 AY029161 AK313715 BC015479 AK296724	-137514	-	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	-246864	-	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	224017	-	TSC_hg19_v1_chr8_+_11141999 BC034990 NM_015458	307164	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	307507	+	AF205718|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF418553|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ344104|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY238941|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY523566|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC093762|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC143382|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##NM_017884|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AK313715|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC015479|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7##AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##BC034990|MTMR9|66036|myotubularin related protein 9##NM_015458|MTMR9|66036|myotubularin related protein 9##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9	0.999677	CTCF.p2:1:1.000
chr1	147553594	147553710	reg1005934.p1	12.782	+	NM_001097616	-128086	+	TSC_hg19_v1_chr1_+_147400563 BC146880 AK316371 BC003187 AB528816 DQ890650 DQ893830 BT006679	-153051	+	TSC_hg19_v1_chr1_+_147400532 AK021758 NM_016334 AL133020 AY358966 AB097024 AB097025 AK223223 AK299995 AK302266 BC067816 AF132947 U78723	-153130	+	AF419617 NM_001101663	56428	-	BX648497 TSC_hg19_v1_chr1_-_147624379	70693	-	TSC_hg19_v1_chr1_-_147624593 BC136292 NM_183372	70864	-	NM_001097616|GPR89C|728932|G protein-coupled receptor 89C##BC146880|GPR89A|653519|G protein-coupled receptor 89A##AK316371|GPR89A|653519|G protein-coupled receptor 89A##BC003187|GPR89A|653519|G protein-coupled receptor 89A##DQ890650|GPR89B|51463|G protein-coupled receptor 89B##DQ893830|GPR89A|653519|G protein-coupled receptor 89A##BT006679|GPR89A|653519|G protein-coupled receptor 89A##AK021758|GPR89A|653519|G protein-coupled receptor 89A##NM_016334|GPR89B|51463|G protein-coupled receptor 89B##AL133020|GPR89B|51463|G protein-coupled receptor 89B##AY358966|GPR89A|653519|G protein-coupled receptor 89A##AB097024|GPR89A|653519|G protein-coupled receptor 89A##AB097025|GPR89A|653519|G protein-coupled receptor 89A##AK223223|GPR89A|653519|G protein-coupled receptor 89A##AK299995|GPR89A|653519|G protein-coupled receptor 89A##AK302266|GPR89B|51463|G protein-coupled receptor 89B##BC067816|GPR89A|653519|G protein-coupled receptor 89A##AF132947|GPR89A|653519|G protein-coupled receptor 89A##U78723|GPR89B|51463|G protein-coupled receptor 89B##AF419617|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_001101663|NBPF24|728912|neuroblastoma breakpoint family, member 24##BX648497|NBPF11|200030|neuroblastoma breakpoint family, member 11##BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11	0.924677	CTCF.p2:12:0.925
chr2	97173883	97174002	reg1005579.p1	12.782	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-172406	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-172466	+	NM_178495 NM_001163524 BC034503	-181994	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	28543	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	130077	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	130125	-	BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_178495|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163524|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC034503|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.534004	CTCF.p2:19:0.513
chr3	19908348	19908497	reg1006914.p1	12.782	+	AK295633 AY053503 NM_144633 AB209053 AK309034	-718418	+	BC001744 NM_001131010	-1428189	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	-1441625	-	BC028198 AK097644 NM_144715	67266	-	TSC_hg19_v1_chr3_+_19988586 NM_004162	80267	+	TSC_hg19_v1_chr3_+_19988870 AK312618 BC018288 AK309287 AK295992 BC001267	80479	+	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC028198|EFHB|151651|EF-hand domain family, member B##AK097644|EFHB|151651|EF-hand domain family, member B##NM_144715|EFHB|151651|EF-hand domain family, member B##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family##AK312618|RAB5A|5868|RAB5A, member RAS oncogene family##BC018288|RAB5A|5868|RAB5A, member RAS oncogene family##AK309287|RAB5A|5868|RAB5A, member RAS oncogene family##AK295992|RAB5A|5868|RAB5A, member RAS oncogene family##BC001267|RAB5A|5868|RAB5A, member RAS oncogene family	0.866457	CTCF.p2:2:0.866
chr10	110304401	110304519	reg1005464.p1	12.781	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-1380084	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-1845401	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-3903415	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	1378749	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	1378817	-	NM_019903 AB209810 BC057285	1461321	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.957154	CTCF.p2:5:0.957
chr15	59914653	59914766	reg1005735.p1	12.781	+	AK312852 TSC_hg19_v1_chr15_+_59909017	-5747	+	TSC_hg19_v1_chr15_+_59908724 AF102542	-5954	+	TSC_hg19_v1_chr15_+_59904093 BC017032	-10603	+	TSC_hg19_v1_chr15_-_59949715 X81713 U21242 U14193 BC000287 BC001919 AK312015 NM_004492	34941	-	TSC_hg19_v1_chr15_-_59981511 U15173	66765	-	BC002461 TSC_hg19_v1_chr15_-_59981517 AK308237 NM_004330	66870	-	AK312852|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##AF102542|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##BC017032|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##X81713|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##U21242|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##U14193|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##BC000287|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##BC001919|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##AK312015|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##NM_004492|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##U15173|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##BC002461|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##AK308237|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##NM_004330|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2	0.990275	CTCF.p2:11:0.990
chr1	8042484	8042620	reg1006881.p1	12.781	+	TSC_hg19_v1_chr1_+_8021770 BC008188	-20756	+	AF021819 TSC_hg19_v1_chr1_+_8021756 AK130886 AK312000	-20792	+	TSC_hg19_v1_chr1_+_8021722 NM_001123377 NM_007262	-20831	+	AB528431 AJ276373 DQ892137 DQ895331 BC012839 TSC_hg19_v1_chr1_-_8075752	33163	-	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	43809	-	NM_018948 TSC_hg19_v1_chr1_-_8086396	43846	-	BC008188|PARK7|11315|parkinson protein 7##AF021819|PARK7|11315|parkinson protein 7##AK130886|PARK7|11315|parkinson protein 7##AK312000|PARK7|11315|parkinson protein 7##NM_001123377|PARK7|11315|parkinson protein 7##NM_007262|PARK7|11315|parkinson protein 7##AJ276373|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ892137|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ895331|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC012839|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1	0.996044	CTCF.p2:-7:0.996
chr3	15853808	15853946	reg1006026.p1	12.781	+	TSC_hg19_v1_chr3_-_15839678 AK293770 NM_001195098	-14195	-	AY367056 NM_001195099 BC035170 BC048975	-55800	-	TSC_hg19_v1_chr3_+_15643452 AK301838	-210414	+	AB002377 NM_015199 TSC_hg19_v1_chr3_-_15901096	47135	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	362317	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	452512	-	AK293770|ANKRD28|23243|ankyrin repeat domain 28##NM_001195098|ANKRD28|23243|ankyrin repeat domain 28##AY367056|ANKRD28|23243|ankyrin repeat domain 28##NM_001195099|ANKRD28|23243|ankyrin repeat domain 28##BC035170|ANKRD28|23243|ankyrin repeat domain 28##BC048975|ANKRD28|23243|ankyrin repeat domain 28##AK301838|BTD|686|biotinidase##AB002377|ANKRD28|23243|ankyrin repeat domain 28##NM_015199|ANKRD28|23243|ankyrin repeat domain 28##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)	0.191834	
chr11	112459017	112459149	reg1006228.p1	12.780	+	AY364435 NM_001145024	-327501	-	TSC_hg19_v1_chr11_+_112097100 NM_000317 BC018029 D17400 AK310768 BC009686 AK307133 M97655 AM392676 AM393300 AM393668 DQ890961 DQ894133	-361956	+	NM_001037290 AK027801 AK297853 AB096252	-411978	+	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 TSC_hg19_v1_chr11_+_112831996 AK314589	372904	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	373048	+	X16841 TSC_hg19_v1_chr11_+_112832212	373123	+	AY364435|C11orf34|349633|chromosome 11 open reading frame 34##NM_001145024|C11orf34|349633|chromosome 11 open reading frame 34##NM_000317|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC018029|PTS|5805|6-pyruvoyltetrahydropterin synthase##D17400|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK310768|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC009686|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK307133|PTS|5805|6-pyruvoyltetrahydropterin synthase##M97655|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM392676|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393300|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393668|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ890961|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ894133|PTS|5805|6-pyruvoyltetrahydropterin synthase##NM_001037290|BCO2|83875|beta-carotene oxygenase 2##AK027801|BCO2|83875|beta-carotene oxygenase 2##AK297853|BCO2|83875|beta-carotene oxygenase 2##AB096252|BCO2|83875|beta-carotene oxygenase 2##NM_000615|NCAM1|4684|neural cell adhesion molecule 1##NM_001076682|NCAM1|4684|neural cell adhesion molecule 1##NM_001242607|NCAM1|4684|neural cell adhesion molecule 1##NM_001242608|NCAM1|4684|neural cell adhesion molecule 1##NM_181351|NCAM1|4684|neural cell adhesion molecule 1##AK314589|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1	0.999291	CTCF.p2:-10:0.999
chr17	46569972	46570130	reg1005537.p1	12.780	+	TSC_hg19_v1_chr17_-_46507604 BC039040	-62434	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	-62513	-	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-384899	+	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	38220	-	EU446481 BC074805 BC074806 X16665 NM_002145	52282	-	NM_002146 AK027609	81777	-	BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1##EU446481|HOXB2|3212|homeobox B2##BC074805|HOXB2|3212|homeobox B2##BC074806|HOXB2|3212|homeobox B2##X16665|HOXB2|3212|homeobox B2##NM_002145|HOXB2|3212|homeobox B2##NM_002146|HOXB3|3213|homeobox B3##AK027609|HOXB3|3213|homeobox B3	0.012888	
chr3	12217480	12217615	reg1007365.p1	12.780	+	BC010553 NM_003256	-16697	-	BT019627 CU679743 DQ891795 DQ894978 U76456 TSC_hg19_v1_chr3_-_12200413 AK313018	-17168	-	TSC_hg19_v1_chr3_+_12045861 NM_003178 NM_133625 AK094464 BC051307 AB209088 U40215 AF077671 AF077737	-171644	+	TSC_hg19_v1_chr3_+_12329422 NM_005037 NM_138712 X90563 AK290581	111909	+	AB097931 AB107271 AB472042 NM_138711 TSC_hg19_v1_chr3_+_12330568 BC006811 AJ563370	112925	+	TSC_hg19_v1_chr3_+_12392993 NM_015869 U79012 AB451337 AB451486 U63415 AJ563369	175515	+	BC010553|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_003256|TIMP4|7079|TIMP metallopeptidase inhibitor 4##BT019627|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ891795|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ894978|TIMP4|7079|TIMP metallopeptidase inhibitor 4##U76456|TIMP4|7079|TIMP metallopeptidase inhibitor 4##AK313018|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_003178|SYN2|6854|synapsin II##NM_133625|SYN2|6854|synapsin II##AK094464|SYN2|6854|synapsin II##BC051307|SYN2|6854|synapsin II##AB209088|SYN2|6854|synapsin II##U40215|SYN2|6854|synapsin II##AF077671|SYN2|6854|synapsin II##AF077737|SYN2|6854|synapsin II##NM_005037|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138712|PPARG|5468|peroxisome proliferator-activated receptor gamma##X90563|PPARG|5468|peroxisome proliferator-activated receptor gamma##AK290581|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB097931|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB107271|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB472042|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138711|PPARG|5468|peroxisome proliferator-activated receptor gamma##BC006811|PPARG|5468|peroxisome proliferator-activated receptor gamma##AJ563370|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_015869|PPARG|5468|peroxisome proliferator-activated receptor gamma##U79012|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB451337|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB451486|PPARG|5468|peroxisome proliferator-activated receptor gamma##U63415|PPARG|5468|peroxisome proliferator-activated receptor gamma##AJ563369|PPARG|5468|peroxisome proliferator-activated receptor gamma	0.992079	CTCF.p2:-2:0.992
chrX	2511430	2511550	reg1004638.p1	12.780	+	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	-92502	-	BC015030 NM_001171135	-92911	-	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	-777487	+	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	97822	+	AK304164 NM_001141919 NM_001141920 NM_175569 AF380356 AF534880 BC100764 BC100765 BC100766 BC100767 Z48517 Z48518 Z48519	158724	+	TSC_hg19_v1_chrX_+_2746813 NM_001079855 NM_001184702 NM_001184703 NM_001184704 NM_003918 U94362 AK098046 AK292496 U94363 BC023152	235412	+	BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC015030|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule##AK304164|XG|7499|Xg blood group##NM_001141919|XG|7499|Xg blood group##NM_001141920|XG|7499|Xg blood group##NM_175569|XG|7499|Xg blood group##AF380356|XG|7499|Xg blood group##BC100764|XG|7499|Xg blood group##BC100765|XG|7499|Xg blood group##BC100766|XG|7499|Xg blood group##BC100767|XG|7499|Xg blood group##Z48517|XG|7499|Xg blood group##Z48518|XGPY2|100132596|Xg pseudogene, Y-linked 2##Z48519|XGPY2|100132596|Xg pseudogene, Y-linked 2##NM_001079855|GYG2|8908|glycogenin 2##NM_001184702|GYG2|8908|glycogenin 2##NM_001184703|GYG2|8908|glycogenin 2##NM_001184704|GYG2|8908|glycogenin 2##NM_003918|GYG2|8908|glycogenin 2##U94362|GYG2|8908|glycogenin 2##AK098046|GYG2|8908|glycogenin 2##AK292496|GYG2|8908|glycogenin 2##U94363|GYG2|8908|glycogenin 2##BC023152|GYG2|8908|glycogenin 2	0.7928	CTCF.p2:44:0.793
chr10	1463187	1463293	reg1004532.p1	12.779	+	TSC_hg19_v1_chr10_+_1102822 AK292591	-360414	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-360471	+	BC057827 TSC_hg19_v1_chr10_-_1102645	-360588	-	AF034837 NM_018702	316429	-	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	1646507	+	AK092597 AX747622 NM_001242339	1647578	+	AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC057827|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet	0.960387	CTCF.p2:5:0.960
chr14	25275565	25275686	reg1005351.p1	12.779	+	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-172207	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-196764	-	AB590242 CR456807 CR541704 DQ893067 DQ896320 M16117 TSC_hg19_v1_chr14_-_25045457 AK225914 BC014460 NM_001911	-230179	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	243613	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1791363	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	3960603	+	AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##CR456807|CTSG|1511|cathepsin G##CR541704|CTSG|1511|cathepsin G##DQ893067|CTSG|1511|cathepsin G##DQ896320|CTSG|1511|cathepsin G##M16117|CTSG|1511|cathepsin G##AK225914|CTSG|1511|cathepsin G##BC014460|CTSG|1511|cathepsin G##NM_001911|CTSG|1511|cathepsin G##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1	0.46324	CTCF.p2:-13:0.463
chr19	30181986	30182094	reg1004486.p2	12.779	+	TSC_hg19_v1_chr19_+_30156375 AK225814	-25619	+	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	-25691	+	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	-84851	+	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	24052	-	TSC_hg19_v1_chr19_-_30206402 NM_031448	24382	-	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	120861	+	NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1	0.535185	CTCF.p2:8:0.535
chr2	43251764	43251890	reg1006494.p1	12.779	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-232076	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-260527	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-455930	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	201518	-	TSC_hg19_v1_chr2_-_43453736 BC020369	201903	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	201915	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.515726	CTCF.p2:-15:0.516
chr7	86777826	86777940	reg1004763.p2	12.779	+	TSC_hg19_v1_chr7_-_86688965 NM_001142749	-88905	-	AK296250 NM_152748	-182637	-	X77748 TSC_hg19_v1_chr7_+_86274130 DQ315361 DQ315362 DQ315363	-503767	+	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	3830	+	NM_021145 TSC_hg19_v1_chr7_+_86781946 BC070064	4054	+	BT006973 TSC_hg19_v1_chr7_-_86849049 BC002837 NM_024315 AK313794	71058	-	NM_001142749|KIAA1324L|222223|KIAA1324-like##AK296250|KIAA1324L|222223|KIAA1324-like##NM_152748|KIAA1324L|222223|KIAA1324-like##X77748|GRM3|2913|glutamate receptor, metabotropic 3##DQ315361|GRM3|2913|glutamate receptor, metabotropic 3##DQ315362|GRM3|2913|glutamate receptor, metabotropic 3##DQ315363|GRM3|2913|glutamate receptor, metabotropic 3##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_021145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BC070064|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BT006973|C7orf23|79161|chromosome 7 open reading frame 23##BC002837|C7orf23|79161|chromosome 7 open reading frame 23##NM_024315|C7orf23|79161|chromosome 7 open reading frame 23##AK313794|C7orf23|79161|chromosome 7 open reading frame 23	0.405146	CTCF.p2:-12:0.405
chr1	201330868	201331003	reg1006034.p1	12.778	+	NM_000299 NM_001005337 Z34974 AK315291 X79293 BC114571 BC115702	-78298	+	BC033185 NM_001164586	-170983	+	AK075335 AY138587 AK296307 TSC_hg19_v1_chr1_-_201123603 BC001106 AL136600 AK054883 AK303843 NM_016456	-207323	-	TSC_hg19_v1_chr1_-_201342319 X79855 X79856 X79858 CU678094 S64668 X74819 X79859	11445	-	TSC_hg19_v1_chr1_-_201346783 L40162 AY277394 X79861 BC002653	15853	-	NM_000364 NM_001001430 NM_001001431 NM_001001432 AK125236 TSC_hg19_v1_chr1_-_201346809 AK290621	15911	-	NM_000299|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##NM_001005337|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##Z34974|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##AK315291|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##X79293|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC114571|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC115702|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC033185|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##NM_001164586|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##AK075335|TMEM9|252839|transmembrane protein 9##AY138587|TMEM9|252839|transmembrane protein 9##AK296307|TMEM9|252839|transmembrane protein 9##BC001106|TMEM9|252839|transmembrane protein 9##AL136600|TMEM9|252839|transmembrane protein 9##AK054883|TMEM9|252839|transmembrane protein 9##AK303843|TMEM9|252839|transmembrane protein 9##NM_016456|TMEM9|252839|transmembrane protein 9##X79855|TNNT2|7139|troponin T type 2 (cardiac)##X79856|TNNT2|7139|troponin T type 2 (cardiac)##X79858|TNNT2|7139|troponin T type 2 (cardiac)##S64668|TNNT2|7139|troponin T type 2 (cardiac)##X74819|TNNT2|7139|troponin T type 2 (cardiac)##X79859|TNNT2|7139|troponin T type 2 (cardiac)##L40162|TNNT2|7139|troponin T type 2 (cardiac)##AY277394|TNNT2|7139|troponin T type 2 (cardiac)##X79861|TNNT2|7139|troponin T type 2 (cardiac)##BC002653|TNNT2|7139|troponin T type 2 (cardiac)##NM_000364|TNNT2|7139|troponin T type 2 (cardiac)##NM_001001430|TNNT2|7139|troponin T type 2 (cardiac)##NM_001001431|TNNT2|7139|troponin T type 2 (cardiac)##NM_001001432|TNNT2|7139|troponin T type 2 (cardiac)##AK125236|TNNT2|7139|troponin T type 2 (cardiac)##AK290621|TNNT2|7139|troponin T type 2 (cardiac)	0.997731	CTCF.p2:16:0.998
chr6	36308861	36308983	reg1006560.p1	12.778	+	BC140873 BX648558 NM_001010903 TSC_hg19_v1_chr6_-_36304663	-4297	-	AM182887 FJ457781 NM_001145717	-70686	+	AK096074 NM_173676 BC103905 BC103906 BC103907 NM_001145716	-97961	+	AF175387 AF218365 AF116508 AF116509 AF116510 AF218235 AF218366 BC035853 AK301011 AF147782 AK223424 AJ276205 AK026144 NM_001207038 AK303829 NM_001207035 NM_001207036 NM_001207037 NM_001207039 NM_001207040 NM_001207041 NM_016135	46537	-	BC031105 NM_152990	101743	-	AY305862 NM_173562 TSC_hg19_v1_chr6_+_36410797 AK295717 AK316456	101748	+	BC140873|C6orf222|389384|chromosome 6 open reading frame 222##BX648558|C6orf222|389384|chromosome 6 open reading frame 222##NM_001010903|C6orf222|389384|chromosome 6 open reading frame 222##AM182887|PNPLA1|285848|patatin-like phospholipase domain containing 1##FJ457781|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145717|PNPLA1|285848|patatin-like phospholipase domain containing 1##AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1##AF175387|ETV7|51513|ets variant 7##AF218365|ETV7|51513|ets variant 7##AF116508|ETV7|51513|ets variant 7##AF116509|ETV7|51513|ets variant 7##AF116510|ETV7|51513|ets variant 7##AF218235|ETV7|51513|ets variant 7##AF218366|ETV7|51513|ets variant 7##BC035853|ETV7|51513|ets variant 7##AK301011|ETV7|51513|ets variant 7##AF147782|ETV7|51513|ets variant 7##AK223424|ETV7|51513|ets variant 7##AJ276205|ETV7|51513|ets variant 7##AK026144|ETV7|51513|ets variant 7##NM_001207038|ETV7|51513|ets variant 7##AK303829|ETV7|51513|ets variant 7##NM_001207035|ETV7|51513|ets variant 7##NM_001207036|ETV7|51513|ets variant 7##NM_001207037|ETV7|51513|ets variant 7##NM_001207039|ETV7|51513|ets variant 7##NM_001207040|ETV7|51513|ets variant 7##NM_001207041|ETV7|51513|ets variant 7##NM_016135|ETV7|51513|ets variant 7##BC031105|PXT1|222659|peroxisomal, testis specific 1##NM_152990|PXT1|222659|peroxisomal, testis specific 1##AY305862|KCTD20|222658|potassium channel tetramerisation domain containing 20##NM_173562|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK295717|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK316456|KCTD20|222658|potassium channel tetramerisation domain containing 20	0.506889	CTCF.p2:-2:0.507
chr11	122625363	122625491	reg1006276.p1	12.777	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	-98880	+	BC130361 BC130363 AF303179 NM_001001786	-638566	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-1164329	+	BC070266 AK313578 AF001622 NM_019604	83802	+	AK097534 BC068507 NM_024806 NM_199124	128004	+	AB231738 NM_001098169	226929	-	NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63##AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox	0.989109	CTCF.p2:13:0.989
chr1	202162077	202162201	reg1005136.p1	12.777	+	TSC_hg19_v1_chr1_-_202130715 AK127214 AK302869 NM_001199797 NM_002832	-31438	-	TSC_hg19_v1_chr1_-_202129731 AK301051 AK301757 AK311661 AK293186 AK301980	-32395	-	M64322 TSC_hg19_v1_chr1_-_202129719 AK225920 D11327	-32425	-	NM_001017403 AB049405	1035	+	AY358119 BC038795 NM_021636 BC047905	10753	+	AF190501 NM_001017404	21143	+	AK127214|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK302869|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_001199797|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_002832|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301051|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301757|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK311661|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK293186|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301980|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##M64322|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK225920|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##D11327|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_001017403|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AB049405|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AY358119|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC038795|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_021636|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC047905|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AF190501|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_001017404|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6	0.999182	CTCF.p2:-1:0.999
chr20	32450897	32451047	reg1001175.p2	12.777	+	TSC_hg19_v1_chr20_+_32399155 AB100261 BC033859 AY726594 AY329085	-51752	+	TSC_hg19_v1_chr20_+_32399127 NM_176812	-51886	+	BC132873 BC144188 BC157823 BC146811 BC094738 NM_032819 BC063492 BC040440 AB587355 HQ258664	-131176	+	TSC_hg19_v1_chr20_+_32581531 NM_007367 NM_016732	130507	+	TSC_hg19_v1_chr20_+_32581567 AK226085	130615	+	TSC_hg19_v1_chr20_+_32581716 BC103753 AK299766	130732	+	AB100261|CHMP4B|128866|charged multivesicular body protein 4B##BC033859|CHMP4B|128866|charged multivesicular body protein 4B##AY726594|CHMP4B|128866|charged multivesicular body protein 4B##AY329085|CHMP4B|128866|charged multivesicular body protein 4B##NM_176812|CHMP4B|128866|charged multivesicular body protein 4B##BC132873|ZNF341|84905|zinc finger protein 341##BC144188|ZNF341|84905|zinc finger protein 341##BC157823|ZNF341|84905|zinc finger protein 341##BC146811|ZNF341|84905|zinc finger protein 341##BC094738|ZNF341|84905|zinc finger protein 341##NM_032819|ZNF341|84905|zinc finger protein 341##BC063492|ZNF341|84905|zinc finger protein 341##BC040440|ZNF341|84905|zinc finger protein 341##HQ258664|ZNF341|84905|zinc finger protein 341##NM_007367|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##NM_016732|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK226085|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC103753|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK299766|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))	0.34383	CTCF.p2:-12:0.344
chr8	56972814	56972947	reg1006285.p1	12.777	+	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-180360	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	-180485	+	TSC_hg19_v1_chr8_+_56792383 M16038 NM_001111097 NM_002350 BC126456 BC126458	-180515	+	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	14206	-	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	53660	-	TSC_hg19_v1_chr8_-_57123833 U65002	150955	-	AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M16038|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_001111097|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_002350|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126456|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126458|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1	0.181148	
chrX	58052564	58052681	reg1005973.p1	12.776	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-115663	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-434162	+	NM_007157	-434354	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	4518577	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	4595645	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	4728245	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.96273	CTCF.p2:13:0.963
chr10	118441944	118442084	reg1006097.p1	12.775	+	AK097587 BC021737 NM_144661	-12540	-	TSC_hg19_v1_chr10_+_118380464 AK291492 AK307745 AK308508 AK308511 AK308521 NM_005396	-61555	+	BC005233 CR749596 CR749299 CR749524 M93283 NM_006229 AK307063 AK130236 BC025784 CU675059	-91459	+	AB385329 TSC_hg19_v1_chr10_-_118502078 AB007877 NM_025015	60064	-	BX647301 NM_001242699	167008	+	BC022348 TSC_hg19_v1_chr10_-_118680989 AL157479	238978	-	AK097587|C10orf82|143379|chromosome 10 open reading frame 82##BC021737|C10orf82|143379|chromosome 10 open reading frame 82##NM_144661|C10orf82|143379|chromosome 10 open reading frame 82##AK291492|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK307745|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308508|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308511|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308521|PNLIPRP2|5408|pancreatic lipase-related protein 2##NM_005396|PNLIPRP2|5408|pancreatic lipase-related protein 2##BC005233|PNLIPRP1|5407|pancreatic lipase-related protein 1##CR749596|PNLIPRP1|5407|pancreatic lipase-related protein 1##CR749299|PNLIPRP1|5407|pancreatic lipase-related protein 1##CR749524|PNLIPRP1|5407|pancreatic lipase-related protein 1##M93283|PNLIPRP1|5407|pancreatic lipase-related protein 1##NM_006229|PNLIPRP1|5407|pancreatic lipase-related protein 1##AK307063|PNLIPRP1|5407|pancreatic lipase-related protein 1##AK130236|PNLIPRP1|5407|pancreatic lipase-related protein 1##BC025784|PNLIPRP1|5407|pancreatic lipase-related protein 1##AB007877|HSPA12A|259217|heat shock 70kDa protein 12A##NM_025015|HSPA12A|259217|heat shock 70kDa protein 12A##BX647301|ENO4|387712|enolase family member 4##NM_001242699|ENO4|387712|enolase family member 4##BC022348|KIAA1598|57698|KIAA1598##AL157479|KIAA1598|57698|KIAA1598	0.951549	CTCF.p2:7:0.952
chr16	81400091	81400234	reg1006483.p1	12.775	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-51512	+	TSC_hg19_v1_chr16_+_81348566 AK095378 NM_022041 AF291673	-51593	+	AK296011 AF294900 AK001592 BC022269 NM_017429 BC126210 BC126212 HQ258298	-127759	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	78671	+	AY172689 NM_030629	128791	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	412735	+	BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##AK095378|GAN|8139|gigaxonin##NM_022041|GAN|8139|gigaxonin##AF291673|GAN|8139|gigaxonin##AK296011|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##AF294900|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##AK001592|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC022269|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##NM_017429|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC126210|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC126212|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##HQ258298|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.979183	CTCF.p2:-26:0.979
chr2	231968994	231969107	reg1005645.p1	12.774	+	TSC_hg19_v1_chr2_+_231921625 BC020223 BC007535 BC073833 BC039845 BC047897 D44466 AB590660	-47370	+	BC014013 TSC_hg19_v1_chr2_+_231921608 BC005036 BC032445 BC112344 BC114434 AK312528 BC001053 AK307513	-47434	+	TSC_hg19_v1_chr2_+_231921606 BC064398	-47449	+	AK313741 BC063123 NM_000867	20739	-	TSC_hg19_v1_chr2_+_232063340 NM_025139 BX537956 AK309395	94305	+	AY219922 TSC_hg19_v1_chr2_+_232063378	94328	+	BC020223|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC007535|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC073833|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC039845|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC047897|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##D44466|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC014013|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC032445|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC112344|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC114434|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK312528|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC001053|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307513|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC064398|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK313741|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B##BC063123|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B##NM_000867|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B##NM_025139|ARMC9|80210|armadillo repeat containing 9##BX537956|ARMC9|80210|armadillo repeat containing 9##AK309395|ARMC9|80210|armadillo repeat containing 9##AY219922|ARMC9|80210|armadillo repeat containing 9	0.0	
chr22	50936756	50936866	reg1005507.p1	12.774	+	BC012025 NM_017584 CR456478 BC073848 AY064416 BC064395 AB528181 AY738258 CU013028 CU013316 CU687262	-11542	+	TSC_hg19_v1_chr22_+_50919971 AK024788 AK225097 NM_024866 AB236970 NM_001253845 AK090635 AB463404 AB121034 AF529213	-16688	+	EU831421 EU831514 BC111424 BC087612 TSC_hg19_v1_chr22_-_50913465 BC040031 AK057985 NM_002972	-23423	-	TSC_hg19_v1_chr22_-_50946121 AB587524 CU013086 CU013374 BC002942 BC021143 BC014652 CR456605	9259	-	TSC_hg19_v1_chr22_-_50946129 NM_033200	9348	-	TSC_hg19_v1_chr22_+_50946652 NM_001185011 NM_014551 NM_152299	9828	+	BC012025|MIOX|55586|myo-inositol oxygenase##NM_017584|MIOX|55586|myo-inositol oxygenase##CR456478|MIOX|55586|myo-inositol oxygenase##BC073848|MIOX|55586|myo-inositol oxygenase##AY064416|MIOX|55586|myo-inositol oxygenase##BC064395|MIOX|55586|myo-inositol oxygenase##AY738258|MIOX|55586|myo-inositol oxygenase##CU013028|MIOX|55586|myo-inositol oxygenase##CU013316|MIOX|55586|myo-inositol oxygenase##AK024788|ADM2|79924|adrenomedullin 2##NM_024866|ADM2|79924|adrenomedullin 2##AB236970|ADM2|79924|adrenomedullin 2##NM_001253845|ADM2|79924|adrenomedullin 2##AK090635|ADM2|79924|adrenomedullin 2##AB121034|ADM2|79924|adrenomedullin 2##AF529213|ADM2|79924|adrenomedullin 2##EU831421|SBF1|6305|SET binding factor 1##EU831514|SBF1|6305|SET binding factor 1##BC087612|SBF1|6305|SET binding factor 1##BC040031|SBF1|6305|SET binding factor 1##AK057985|SBF1|6305|SET binding factor 1##NM_002972|SBF1|6305|SET binding factor 1##BC002942|LMF2|91289|lipase maturation factor 2##BC021143|LMF2|91289|lipase maturation factor 2##BC014652|LMF2|91289|lipase maturation factor 2##CR456605|LMF2|91289|lipase maturation factor 2##NM_033200|LMF2|91289|lipase maturation factor 2##NM_001185011|NCAPH2|29781|non-SMC condensin II complex, subunit H2##NM_014551|NCAPH2|29781|non-SMC condensin II complex, subunit H2##NM_152299|NCAPH2|29781|non-SMC condensin II complex, subunit H2	0.998135	CTCF.p2:-2:0.998
chr1	31895688	31895830	reg1006707.p1	12.770	+	AK093784 AK316357 AX748305 NM_001199039 NM_018565 AK296118	-9072	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	-9693	+	NM_001199037 AK298512	-12726	+	NM_001204414 NM_022164 TSC_hg19_v1_chr1_+_32042115 AK292770 AK075398 AK296322 AK298382	146344	+	TSC_hg19_v1_chr1_+_32042122 AY358421	146363	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	146383	+	AK093784|SERINC2|347735|serine incorporator 2##AK316357|SERINC2|347735|serine incorporator 2##NM_001199039|SERINC2|347735|serine incorporator 2##NM_018565|SERINC2|347735|serine incorporator 2##AK296118|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##NM_001204414|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_022164|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK292770|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK075398|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK296322|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298382|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AY358421|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1	0.98851	CTCF.p2:5:0.989
chr5	111756079	111756220	reg1006086.p1	12.770	+	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	-1276	-	TSC_hg19_v1_chr5_+_111496560 AB002437	-259580	+	AK298779 NM_001142474 NM_001142475	-443575	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	287062	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	317424	+	NM_001204193 NM_001204194 NM_001204196 NM_001204199 NM_003135 TSC_hg19_v1_chr5_+_112196975	440780	+	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli##NM_001204193|SRP19|6728|signal recognition particle 19kDa##NM_001204194|SRP19|6728|signal recognition particle 19kDa##NM_001204196|SRP19|6728|signal recognition particle 19kDa##NM_001204199|SRP19|6728|signal recognition particle 19kDa##NM_003135|SRP19|6728|signal recognition particle 19kDa	0.831016	CTCF.p2:0:0.831
chr1	67699819	67699958	reg1004690.p1	12.769	+	AF461422 NM_144701	-67720	+	NM_001013674	-105669	-	TSC_hg19_v1_chr1_-_67520070 AK289800 NM_015139	-179835	-	NM_001559 U64198 TSC_hg19_v1_chr1_+_67773087	73193	+	AK294494 TSC_hg19_v1_chr1_+_67773565 AK316525	73675	+	CR457383 AB527591 CU675982 CU676556 CU677990 CU693242 EU831446 EU831638 EU831722 EU832650 EU832728 TSC_hg19_v1_chr1_-_67896065 BC003049 AK130606 BC002488 BC008045 BC017449 BC020555 BC026916 BC019273 AL080119 AF151813	196135	-	AF461422|IL23R|149233|interleukin 23 receptor##NM_144701|IL23R|149233|interleukin 23 receptor##NM_001013674|C1orf141|400757|chromosome 1 open reading frame 141##AK289800|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_015139|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_001559|IL12RB2|3595|interleukin 12 receptor, beta 2##U64198|IL12RB2|3595|interleukin 12 receptor, beta 2##AK294494|IL12RB2|3595|interleukin 12 receptor, beta 2##AK316525|IL12RB2|3595|interleukin 12 receptor, beta 2##CR457383|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831446|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831638|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831722|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832650|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832728|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC003049|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK130606|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC002488|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC008045|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC017449|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC020555|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC026916|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC019273|SERBP1|26135|SERPINE1 mRNA binding protein 1##AL080119|SERBP1|26135|SERPINE1 mRNA binding protein 1##AF151813|SERBP1|26135|SERPINE1 mRNA binding protein 1	0.879721	CTCF.p2:-22:0.880
chr12	102311609	102311775	reg1005166.p1	12.767	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	-40234	+	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	-40574	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	-87106	-	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	144058	-	TSC_hg19_v1_chr12_-_102455791 BC010889	144085	-	TSC_hg19_v1_chr12_-_102455912 AK314970 AK223339 AF151874 AF155655 NM_016053	144169	-	AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##CR457171|CCDC53|51019|coiled-coil domain containing 53##BC010889|CCDC53|51019|coiled-coil domain containing 53##AK314970|CCDC53|51019|coiled-coil domain containing 53##AK223339|CCDC53|51019|coiled-coil domain containing 53##AF151874|CCDC53|51019|coiled-coil domain containing 53##AF155655|CCDC53|51019|coiled-coil domain containing 53##NM_016053|CCDC53|51019|coiled-coil domain containing 53	0.012564	
chr3	137427989	137428126	reg1007061.p1	12.764	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-751227	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-778720	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	-846965	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	55090	+	AK098474 NM_001002026 AF349452	289622	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	300946	+	AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18	0.966183	CTCF.p2:-4:0.966
chr6	136547481	136547602	reg1006021.p1	12.764	+	AK290582 AB038040 NM_018945 TSC_hg19_v1_chr6_+_136172838 AJ251860 BC070267	-374690	+	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	-728577	+	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	-728656	-	TSC_hg19_v1_chr6_-_136571414 AK292303 BC063688 AK125758 NM_001099286 NM_138419	23888	-	BC078160 BC063846 TSC_hg19_v1_chr6_-_136610926 BX649160 BC016682	63369	-	BC132780 BC144281 BC144282 BC144299 TSC_hg19_v1_chr6_-_136610938 BC047887 BC056894 D79986 NM_001077440 NM_001077441 NM_014739	63419	-	AK290582|PDE7B|27115|phosphodiesterase 7B##AB038040|PDE7B|27115|phosphodiesterase 7B##NM_018945|PDE7B|27115|phosphodiesterase 7B##AJ251860|PDE7B|27115|phosphodiesterase 7B##BC070267|PDE7B|27115|phosphodiesterase 7B##BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##AK292303|FAM54A|113115|family with sequence similarity 54, member A##BC063688|FAM54A|113115|family with sequence similarity 54, member A##AK125758|FAM54A|113115|family with sequence similarity 54, member A##NM_001099286|FAM54A|113115|family with sequence similarity 54, member A##NM_138419|FAM54A|113115|family with sequence similarity 54, member A##BC078160|BCLAF1|9774|BCL2-associated transcription factor 1##BC063846|BCLAF1|9774|BCL2-associated transcription factor 1##BX649160|BCLAF1|9774|BCL2-associated transcription factor 1##BC016682|BCLAF1|9774|BCL2-associated transcription factor 1##BC132780|BCLAF1|9774|BCL2-associated transcription factor 1##BC144281|BCLAF1|9774|BCL2-associated transcription factor 1##BC144282|BCLAF1|9774|BCL2-associated transcription factor 1##BC144299|BCLAF1|9774|BCL2-associated transcription factor 1##BC047887|BCLAF1|9774|BCL2-associated transcription factor 1##BC056894|BCLAF1|9774|BCL2-associated transcription factor 1##D79986|BCLAF1|9774|BCL2-associated transcription factor 1##NM_001077440|BCLAF1|9774|BCL2-associated transcription factor 1##NM_001077441|BCLAF1|9774|BCL2-associated transcription factor 1##NM_014739|BCLAF1|9774|BCL2-associated transcription factor 1	0.505574	CTCF.p2:9:0.506
chr8	44580	44747	reg1004601.p1	12.763	+	None	None	None	None	None	None	None	None	None	NM_001005504	72360	-	AK127000 TSC_hg19_v1_chr8_-_182246 BC064938 BC052779	137609	-	NM_173539 AK093442 AX748129 TSC_hg19_v1_chr8_+_182396 AK313454 NM_001042415 NM_001042416 BC026190	137679	+	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21##AK127000|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC064938|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC052779|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##NM_173539|ZNF596|169270|zinc finger protein 596##AK313454|ZNF596|169270|zinc finger protein 596##NM_001042415|ZNF596|169270|zinc finger protein 596##NM_001042416|ZNF596|169270|zinc finger protein 596##BC026190|ZNF596|169270|zinc finger protein 596	2.931006	CTCF.p2:6:0.977	CTCF.p2:-61:0.977	CTCF.p2:74:0.977
chr3	136471173	136471314	reg1005600.p1	12.762	+	TSC_hg19_v1_chr3_-_136471221 BC040708 AB210023 AK309934 BC064699 CR749247 NM_005862	-28	-	S67325 TSC_hg19_v1_chr3_+_135969193 BC013768 AB209009 BC053661 AK295312 AK130359 AK225733 AK303079 AK225215 AL831978 CU680676	-502041	+	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	-502079	+	BC050423 NM_001097599 NM_001097600 NM_025246 TSC_hg19_v1_chr3_+_136537897 BC022557 AK314079 BC000111 AL136661	66676	+	TSC_hg19_v1_chr3_+_136581071 NM_006153 BC006403	109797	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	109849	+	BC040708|STAG1|10274|stromal antigen 1##AB210023|STAG1|10274|stromal antigen 1##AK309934|STAG1|10274|stromal antigen 1##BC064699|STAG1|10274|stromal antigen 1##CR749247|STAG1|10274|stromal antigen 1##NM_005862|STAG1|10274|stromal antigen 1##S67325|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC013768|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AB209009|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC053661|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK295312|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK130359|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225733|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK303079|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225215|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AL831978|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC050423|TMEM22|80723|transmembrane protein 22##NM_001097599|TMEM22|80723|transmembrane protein 22##NM_001097600|TMEM22|80723|transmembrane protein 22##NM_025246|TMEM22|80723|transmembrane protein 22##BC022557|TMEM22|80723|transmembrane protein 22##AK314079|TMEM22|80723|transmembrane protein 22##BC000111|TMEM22|80723|transmembrane protein 22##AL136661|TMEM22|80723|transmembrane protein 22##NM_006153|NCK1|4690|NCK adaptor protein 1##BC006403|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1	1.930032	CTCF.p2:11:1.000	CTCF.p2:-46:0.930
chr5	149370453	149370573	reg1006958.p1	12.762	+	TSC_hg19_v1_chr5_+_149340476 BC059390 AK290358	-30040	+	TSC_hg19_v1_chr5_+_149340352 AK312596	-30162	+	TSC_hg19_v1_chr5_+_149340320 NM_000112	-30205	+	BC033641 AL136539 AK092978 AX747835 NM_001243253 BC062669 AK056604	9655	-	NM_014983 TSC_hg19_v1_chr5_+_149380175	9678	+	TSC_hg19_v1_chr5_+_149380288 BC092520	9779	+	BC059390|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK290358|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##BC033641|TIGD6|81789|tigger transposable element derived 6##AL136539|TIGD6|81789|tigger transposable element derived 6##AK092978|TIGD6|81789|tigger transposable element derived 6##NM_001243253|TIGD6|81789|tigger transposable element derived 6##BC062669|LOC728287|728287|uncharacterized LOC728287##AK056604|TIGD6|81789|tigger transposable element derived 6##NM_014983|HMGXB3|22993|HMG box domain containing 3##BC092520|HMGXB3|22993|HMG box domain containing 3	0.9998	CTCF.p2:16:1.000
chr17	72732955	72733093	reg1006150.p1	12.761	+	AF251706 AY303545 AK315165 TSC_hg19_v1_chr17_-_72709081 AK298752 AY358545 AK092757 AX747710 NM_139018 BC028199	-23957	-	TSC_hg19_v1_chr17_+_72667316 AK054846	-65707	+	NM_175738 TSC_hg19_v1_chr17_+_72667269 BC040547 AK290202	-65757	+	NM_001163989 TSC_hg19_v1_chr17_+_72733040 AK303442 AB528695	29	+	TSC_hg19_v1_chr17_+_72733394 AK098068 NM_001006638 NM_001163990 AK298033 AK296172 BC016615	355	+	TSC_hg19_v1_chr17_+_72744766 NM_004252 AK094467 AK128474 AK026581 BC049220	11736	+	AF251706|CD300LF|146722|CD300 molecule-like family member f##AY303545|CD300LF|146722|CD300 molecule-like family member f##AK315165|CD300LF|146722|CD300 molecule-like family member f##AK298752|CD300LF|146722|CD300 molecule-like family member f##AY358545|CD300LF|146722|CD300 molecule-like family member f##AK092757|CD300LF|146722|CD300 molecule-like family member f##NM_139018|CD300LF|146722|CD300 molecule-like family member f##BC028199|CD300LF|146722|CD300 molecule-like family member f##AK054846|RAB37|326624|RAB37, member RAS oncogene family##NM_175738|RAB37|326624|RAB37, member RAS oncogene family##BC040547|RAB37|326624|RAB37, member RAS oncogene family##AK290202|RAB37|326624|RAB37, member RAS oncogene family##NM_001163989|RAB37|326624|RAB37, member RAS oncogene family##AK303442|RAB37|326624|RAB37, member RAS oncogene family##AK098068|RAB37|326624|RAB37, member RAS oncogene family##NM_001006638|RAB37|326624|RAB37, member RAS oncogene family##NM_001163990|RAB37|326624|RAB37, member RAS oncogene family##AK296172|RAB37|326624|RAB37, member RAS oncogene family##BC016615|RAB37|326624|RAB37, member RAS oncogene family##NM_004252|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK094467|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK128474|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK026581|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC049220|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	0.247551	
chr18	33530454	33530601	reg1007237.p1	12.761	+	NM_020474 BC047746 U41514 AB529022 X85018	-295948	+	AK095502 AK300660 BC039404 NM_001098817 NM_194281	-452602	-	BC130288 BC136314 AF492004 AF533251 AK055775 NM_145756	-573234	-	NM_001201474 NM_001201475 NM_001201476 NM_031446 BC108730 TSC_hg19_v1_chr18_+_33552656 BC119765 BC119766 AK311536 AF277182 AF277189 BC025950	22140	+	TSC_hg19_v1_chr18_-_33647515 DQ892910 EU176720 AF419845 NM_018170 BC000225 AK314569	116900	-	BC010136 TSC_hg19_v1_chr18_-_33647520	116992	-	NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##AK095502|INO80C|125476|INO80 complex subunit C##AK300660|INO80C|125476|INO80 complex subunit C##BC039404|INO80C|125476|INO80 complex subunit C##NM_001098817|INO80C|125476|INO80 complex subunit C##NM_194281|INO80C|125476|INO80 complex subunit C##BC130288|ZNF396|252884|zinc finger protein 396##BC136314|ZNF396|252884|zinc finger protein 396##AF492004|ZNF396|252884|zinc finger protein 396##AF533251|ZNF396|252884|zinc finger protein 396##AK055775|ZNF396|252884|zinc finger protein 396##NM_145756|ZNF396|252884|zinc finger protein 396##NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21##NM_031446|C18orf21|83608|chromosome 18 open reading frame 21##BC108730|C18orf21|83608|chromosome 18 open reading frame 21##BC119765|C18orf21|83608|chromosome 18 open reading frame 21##BC119766|C18orf21|83608|chromosome 18 open reading frame 21##AF277182|C18orf21|83608|chromosome 18 open reading frame 21##AF277189|C18orf21|83608|chromosome 18 open reading frame 21##BC025950|C18orf21|83608|chromosome 18 open reading frame 21##DQ892910|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##EU176720|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AF419845|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##NM_018170|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC000225|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK314569|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC010136|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A	0.968428	CTCF.p2:8:0.968
chr12	92205596	92205727	reg1004454.p1	12.760	+	NM_001920	-628856	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-629081	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-632350	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	333982	-	AJ845165 AJ845166 NM_001025233	612073	+	AJ845168 NM_001025232	616262	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.899618	CTCF.p2:11:0.900
chr12	6727011	6727136	reg1006523.p1	12.759	+	AK128741 NM_001273 TSC_hg19_v1_chr12_-_6716562	-10517	-	X86691 TSC_hg19_v1_chr12_-_6716523 BC014964 BC025962 BC038596	-10572	-	CR936680 EU446505 TSC_hg19_v1_chr12_-_6715604	-11505	-	NM_001142961 TSC_hg19_v1_chr12_-_6740816	13742	-	BC033571 TSC_hg19_v1_chr12_-_6745131 AK313127 BC072394 NM_020400	18118	-	DQ890872 DQ894028 TSC_hg19_v1_chr12_-_6756578 AK302290 AK311572 BC033010 AB051833 NM_032489	29491	-	AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4##NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4##X86691|CHD4|1108|chromodomain helicase DNA binding protein 4##BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4##BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4##BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4##CR936680|CHD4|1108|chromodomain helicase DNA binding protein 4##EU446505|CHD4|1108|chromodomain helicase DNA binding protein 4##NM_001142961|LPAR5|57121|lysophosphatidic acid receptor 5##BC033571|LPAR5|57121|lysophosphatidic acid receptor 5##AK313127|LPAR5|57121|lysophosphatidic acid receptor 5##BC072394|LPAR5|57121|lysophosphatidic acid receptor 5##NM_020400|LPAR5|57121|lysophosphatidic acid receptor 5##DQ890872|ACRBP|84519|acrosin binding protein##DQ894028|ACRBP|84519|acrosin binding protein##AK302290|ACRBP|84519|acrosin binding protein##AK311572|ACRBP|84519|acrosin binding protein##BC033010|ACRBP|84519|acrosin binding protein##AB051833|ACRBP|84519|acrosin binding protein##NM_032489|ACRBP|84519|acrosin binding protein	0.676994	CTCF.p2:-13:0.677
chr19	47628594	47628703	reg1005218.p2	12.759	+	AB028987 NM_015168 TSC_hg19_v1_chr19_-_47617034	-11626	-	TSC_hg19_v1_chr19_-_47615825 AB384098	-12825	-	AK125279 TSC_hg19_v1_chr19_-_47615487	-13162	-	TSC_hg19_v1_chr19_+_47634114 NM_001145713 NM_001145714 NM_005500 AK021978 AK055481 AK302287 AK027595	5431	+	TSC_hg19_v1_chr19_+_47634121 BC018271 BC000344 AF161489	5477	+	TSC_hg19_v1_chr19_+_47634145 AK315624 AF090385 AF046025 AK090645	5491	+	AB028987|ZC3H4|23211|zinc finger CCCH-type containing 4##NM_015168|ZC3H4|23211|zinc finger CCCH-type containing 4##AK125279|ZC3H4|23211|zinc finger CCCH-type containing 4##NM_001145713|SAE1|10055|SUMO1 activating enzyme subunit 1##NM_001145714|SAE1|10055|SUMO1 activating enzyme subunit 1##NM_005500|SAE1|10055|SUMO1 activating enzyme subunit 1##AK021978|SAE1|10055|SUMO1 activating enzyme subunit 1##AK055481|SAE1|10055|SUMO1 activating enzyme subunit 1##AK302287|SAE1|10055|SUMO1 activating enzyme subunit 1##AK027595|SAE1|10055|SUMO1 activating enzyme subunit 1##BC018271|SAE1|10055|SUMO1 activating enzyme subunit 1##BC000344|SAE1|10055|SUMO1 activating enzyme subunit 1##AF161489|SAE1|10055|SUMO1 activating enzyme subunit 1##AK315624|SAE1|10055|SUMO1 activating enzyme subunit 1##AF090385|SAE1|10055|SUMO1 activating enzyme subunit 1##AF046025|SAE1|10055|SUMO1 activating enzyme subunit 1##AK090645|SAE1|10055|SUMO1 activating enzyme subunit 1	0.986882	CTCF.p2:13:0.987
chr1	968460	968589	reg1004658.p1	12.759	+	AF016903 U84406 TSC_hg19_v1_chr1_+_955679	-12879	+	TSC_hg19_v1_chr1_+_955536 AB385240	-12981	+	TSC_hg19_v1_chr1_+_955499 AB191264 NM_198576	-13028	+	TSC_hg19_v1_chr1_+_978666 BC084578	10198	+	TSC_hg19_v1_chr1_+_995079 AK310350	26562	+	TSC_hg19_v1_chr1_+_995109 BC033949	26588	+	AF016903|AGRN|375790|agrin##U84406|AGRN|375790|agrin##AB191264|AGRN|375790|agrin##NM_198576|AGRN|375790|agrin##BC084578|AGRN|375790|agrin##AK310350|LOC100288175|100288175|uncharacterized LOC100288175##BC033949|LOC100288175|100288175|uncharacterized LOC100288175	0.234949	CTCF.p2:-38:0.235
chr4	8596263	8596386	reg1004442.p1	12.759	+	U83411 TSC_hg19_v1_chr4_+_8594521	-1801	+	AK056317 NM_001014447 NM_001014448 NM_003652 BC080539 BC006393 BC018913 TSC_hg19_v1_chr4_+_8594489	-1885	+	AK128807 NM_080819 BC057778 AY359107	-14009	+	AB593128 M99587 NM_018942	277173	-	NM_001040071	355152	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	620805	+	U83411|CPZ|8532|carboxypeptidase Z##AK056317|CPZ|8532|carboxypeptidase Z##NM_001014447|CPZ|8532|carboxypeptidase Z##NM_001014448|CPZ|8532|carboxypeptidase Z##NM_003652|CPZ|8532|carboxypeptidase Z##BC080539|CPZ|8532|carboxypeptidase Z##BC006393|CPZ|8532|carboxypeptidase Z##BC018913|CPZ|8532|carboxypeptidase Z##AK128807|GPR78|27201|G protein-coupled receptor 78##NM_080819|GPR78|27201|G protein-coupled receptor 78##BC057778|GPR78|27201|G protein-coupled receptor 78##AY359107|GPR78|27201|G protein-coupled receptor 78##M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##NM_001040071|LOC650293|650293|seven transmembrane helix receptor##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.995724	CTCF.p2:21:0.996
chr15	62126417	62126547	reg1004730.p1	12.758	+	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	-604985	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	-605058	-	U04899 U04898 NM_002943 NM_134260	-1206797	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	226132	-	NM_207322 AF504646	232706	+	NM_001007595	330999	-	NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B	0.899963	CTCF.p2:-2:0.900
chr3	150004471	150004593	reg1004836.p2	12.758	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-315452	+	TSC_hg19_v1_chr3_-_149688960 BC043646	-315603	-	TSC_hg19_v1_chr3_-_149688683 AB464068 AF228738 EU832616 EU832688 AK311782 L10678 BC002964 BC095444 AK307227 AK311780 BC018049 AK297915 NM_002628 NM_053024	-315836	-	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	121540	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	122231	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	259438	-	BC012363|LOC646903|646903|uncharacterized LOC646903##BC043646|PFN2|5217|profilin 2##AF228738|PFN2|5217|profilin 2##EU832616|PFN2|5217|profilin 2##EU832688|PFN2|5217|profilin 2##AK311782|PFN2|5217|profilin 2##L10678|PFN2|5217|profilin 2##BC002964|PFN2|5217|profilin 2##BC095444|PFN2|5217|profilin 2##AK307227|PFN2|5217|profilin 2##AK311780|PFN2|5217|profilin 2##BC018049|PFN2|5217|profilin 2##AK297915|PFN2|5217|profilin 2##NM_002628|PFN2|5217|profilin 2##NM_053024|PFN2|5217|profilin 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.284085	CTCF.p2:-1:0.284
chr15	77411270	77411375	reg1005466.p1	12.757	+	TSC_hg19_v1_chr15_-_77363522 NM_001168412 NM_005724 NM_198902	-47778	-	TSC_hg19_v1_chr15_-_77363454 BC011206 BC000704 AK001326	-47839	-	TSC_hg19_v1_chr15_-_77363389 AF054840 CU674348 AB529127 AF133423 AK293677 AK001310 AK001305 BC004280 BC009248 AK075336 AK075482 AK095520 AK298157	-48036	-	AK091802 AX747193 TSC_hg19_v1_chr15_-_77472798	61406	-	TSC_hg19_v1_chr15_-_77712437 NM_024776	301221	-	TSC_hg19_v1_chr15_+_77713043 AK297449 AK311376	301709	+	NM_001168412|TSPAN3|10099|tetraspanin 3##NM_005724|TSPAN3|10099|tetraspanin 3##NM_198902|TSPAN3|10099|tetraspanin 3##BC011206|TSPAN3|10099|tetraspanin 3##BC000704|TSPAN3|10099|tetraspanin 3##AK001326|TSPAN3|10099|tetraspanin 3##AF054840|TSPAN3|10099|tetraspanin 3##AF133423|TSPAN3|10099|tetraspanin 3##AK293677|TSPAN3|10099|tetraspanin 3##AK001310|TSPAN3|10099|tetraspanin 3##AK001305|TSPAN3|10099|tetraspanin 3##BC004280|TSPAN3|10099|tetraspanin 3##BC009248|TSPAN3|10099|tetraspanin 3##AK075336|TSPAN3|10099|tetraspanin 3##AK075482|TSPAN3|10099|tetraspanin 3##AK298157|TSPAN3|10099|tetraspanin 3##AK091802|PEAK1|79834|NKF3 kinase family member##NM_024776|PEAK1|79834|NKF3 kinase family member##AK297449|HMG20A|10363|high mobility group 20A	0.719048	CTCF.p2:-2:0.719
chr2	212610174	212610287	reg1006408.p1	12.756	+	AK316425 NM_001122634 AK302778 AY317138	-1152145	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-1188841	+	NM_001122633 AB208800	-1267812	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	793085	-	AK301503 AF130863 NM_016260	1404825	-	BC028936 NM_001079526	1406102	-	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	1.132252	CTCF.p2:-6:0.989
chr18	2337674	2337824	reg1006969.p1	12.755	+	NM_001117 BC093837 BC101803 S83513	-1432408	+	AK313050 NM_001099733	-1432806	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-1525446	-	AK290001 BC111020 NM_022840	233706	-	NM_006101 BC005239 TSC_hg19_v1_chr18_+_2571579 AK289396 AK313184 BC035617 BC010171	233796	+	TSC_hg19_v1_chr18_+_2571589 AF017790	233846	+	NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4##NM_006101|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC005239|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK289396|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK313184|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC035617|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC010171|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AF017790|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)	0.236856	
chr2	20835680	20835792	reg1005188.p1	12.755	+	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-188904	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-285317	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-308603	-	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	15112	-	AF522369 NM_182828	30687	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	187117	-	AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43	0.0	
chr16	68027250	68027387	reg1005161.p1	12.754	+	AB590471 BC037243 AJ291679 AY358390 BC057789 AK057401 NM_001129758 NM_022357	-12912	-	AF047338 AF054505 AF054506 DQ892254 DQ895457 TSC_hg19_v1_chr16_-_68002543 AK293956 U55054 AK293906 BC021193 BC035480 NM_001145961 NM_001145962 NM_005072	-24789	-	AK299042 NM_001145964	-26580	-	AJ295149 NM_022355	6041	-	TSC_hg19_v1_chr16_-_68057115 BC024273	29790	-	TSC_hg19_v1_chr16_-_68057129 BC014517	29810	-	BC037243|DPEP3|64180|dipeptidase 3##AJ291679|DPEP3|64180|dipeptidase 3##AY358390|DPEP3|64180|dipeptidase 3##BC057789|DPEP3|64180|dipeptidase 3##AK057401|DPEP3|64180|dipeptidase 3##NM_001129758|DPEP3|64180|dipeptidase 3##NM_022357|DPEP3|64180|dipeptidase 3##AF047338|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AF054505|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AF054506|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##DQ892254|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##DQ895457|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK293956|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##U55054|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK293906|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##BC021193|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##BC035480|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_001145961|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_001145962|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_005072|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK299042|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_001145964|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AJ295149|DPEP2|64174|dipeptidase 2##NM_022355|DPEP2|64174|dipeptidase 2##BC024273|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##BC014517|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	0.999865	CTCF.p2:-3:1.000
chr4	48005736	48005850	reg1006539.p1	12.754	+	M84741 NM_001142564 S42457	-22304	-	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	-89198	-	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	-165703	-	AK292021 NM_000087	9167	-	X64802 TSC_hg19_v1_chr4_-_48018662	12844	-	TSC_hg19_v1_chr4_+_48018788 BC067881 CR749484 NM_207330 AK095299	13010	+	M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1##S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1##AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1##BC067881|NIPAL1|152519|NIPA-like domain containing 1##CR749484|NIPAL1|152519|NIPA-like domain containing 1##NM_207330|NIPAL1|152519|NIPA-like domain containing 1##AK095299|NIPAL1|152519|NIPA-like domain containing 1	0.830068	CTCF.p2:-8:0.830
chr21	45930491	45930612	reg1006342.p1	12.753	+	TSC_hg19_v1_chr21_+_45905450 AK057525	-25101	+	BC064321 AK127604 NM_030891 TSC_hg19_v1_chr21_+_45875413 AY358120	-55149	+	NM_003307 TSC_hg19_v1_chr21_+_45773503 AJ878416 AJ417076 BC112342 AY603182	-157018	+	BC016690 BC064517 TSC_hg19_v1_chr21_+_45937524 BC101650 BC101654	6989	+	BC120959 BC120960 AB076347 NM_198691	29523	-	AB528847 AB076348 AB076349 NM_198693	40813	-	BC064321|LRRC3|81543|leucine rich repeat containing 3##AK127604|LRRC3|81543|leucine rich repeat containing 3##NM_030891|LRRC3|81543|leucine rich repeat containing 3##AY358120|LRRC3|81543|leucine rich repeat containing 3##NM_003307|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##AJ878416|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##AJ417076|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##BC112342|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##AY603182|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##BC016690|C21orf90|114043|chromosome 21 open reading frame 90##BC064517|C21orf90|114043|chromosome 21 open reading frame 90##BC101650|C21orf90|114043|chromosome 21 open reading frame 90##BC101654|C21orf90|114043|chromosome 21 open reading frame 90##BC120959|KRTAP10-1|386677|keratin associated protein 10-1##BC120960|KRTAP10-1|386677|keratin associated protein 10-1##AB076347|KRTAP10-1|386677|keratin associated protein 10-1##NM_198691|KRTAP10-1|386677|keratin associated protein 10-1##AB076348|KRTAP10-2|386679|keratin associated protein 10-2##AB076349|KRTAP10-2|386679|keratin associated protein 10-2##NM_198693|KRTAP10-2|386679|keratin associated protein 10-2	0.998772	CTCF.p2:-1:0.999
chr5	154519308	154519441	reg1006431.p1	12.753	+	NM_001099293 AK302388	-126088	+	TSC_hg19_v1_chr5_+_154320654 NM_001014990 NM_014180 AK000601 AK302784 CR933679 BC012565 AF161507 CU680362	-198725	+	TSC_hg19_v1_chr5_-_154317760 AB385260 AY063750 AK022748 BC113614 BC143724 BC036894 BC040931 AK074066 AK315101 NM_001252156 NM_015465	-201658	-	BX537948 NM_000337 NM_001128209 NM_172244	1234386	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	1234799	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	1870861	-	NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##NM_001014990|MRPL22|29093|mitochondrial ribosomal protein L22##NM_014180|MRPL22|29093|mitochondrial ribosomal protein L22##AK000601|MRPL22|29093|mitochondrial ribosomal protein L22##AK302784|MRPL22|29093|mitochondrial ribosomal protein L22##CR933679|MRPL22|29093|mitochondrial ribosomal protein L22##BC012565|MRPL22|29093|mitochondrial ribosomal protein L22##AF161507|MRPL22|29093|mitochondrial ribosomal protein L22##AY063750|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK022748|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC113614|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC143724|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC036894|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC040931|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK074066|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK315101|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_001252156|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_015465|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4	0.998289	CTCF.p2:-14:0.998
chr7	37221700	37221839	reg1005211.p2	12.753	+	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	-196049	-	BC064635 NM_001039459	-197079	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-457693	-	AK291784 NM_001206482	171502	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	266699	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	266786	-	D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1	0.998054	CTCF.p2:13:0.998
chr4	52697444	52697549	reg1005929.p1	12.752	+	AK025164 NM_025087 BC137387 BC137388	-3709224	+	TSC_hg19_v1_chr4_-_48908795 CR749310 BC032808 AK298305 NM_001014446 NM_152398	-3788717	-	TSC_hg19_v1_chr4_+_48833104 NM_001079840 NM_001079841 NM_017830 AK297864 AF323665 AF324350 AK000462 BC003409 NM_001079839 NM_001079842 NM_001168254 BC088361	-3864245	+	AK124346 NM_001040402 NM_015115 TSC_hg19_v1_chr4_+_52709318 BC053897 AK294896 BX537944 AK027051 D87466 BC041702 AM392554 AM392637 AM392729 AM393240	11790	+	CR749811 NM_001024611	186289	-	BT019433 CR456810 DQ893140 DQ896425 EU176433 U29586 TSC_hg19_v1_chr4_-_52904447 AK299765 BC020709 AK289892 U31116 NM_000232	206961	-	AK025164|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##NM_025087|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137387|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137388|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##CR749310|OCIAD2|132299|OCIA domain containing 2##BC032808|OCIAD2|132299|OCIA domain containing 2##AK298305|OCIAD2|132299|OCIA domain containing 2##NM_001014446|OCIAD2|132299|OCIA domain containing 2##NM_152398|OCIAD2|132299|OCIA domain containing 2##NM_001079840|OCIAD1|54940|OCIA domain containing 1##NM_001079841|OCIAD1|54940|OCIA domain containing 1##NM_017830|OCIAD1|54940|OCIA domain containing 1##AK297864|OCIAD1|54940|OCIA domain containing 1##AF323665|OCIAD1|54940|OCIA domain containing 1##AF324350|OCIAD1|54940|OCIA domain containing 1##AK000462|OCIAD1|54940|OCIA domain containing 1##BC003409|OCIAD1|54940|OCIA domain containing 1##NM_001079839|OCIAD1|54940|OCIA domain containing 1##NM_001079842|OCIAD1|54940|OCIA domain containing 1##NM_001168254|OCIAD1|54940|OCIA domain containing 1##BC088361|OCIAD1|54940|OCIA domain containing 1##AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##CR749811|LRRC66|339977|leucine rich repeat containing 66##NM_001024611|LRRC66|339977|leucine rich repeat containing 66##BT019433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR456810|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ893140|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ896425|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##EU176433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U29586|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK299765|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##BC020709|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK289892|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U31116|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##NM_000232|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)	0.0	
chr7	8230118	8230235	reg1005301.p2	12.752	+	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	-221743	+	BC009868 NM_002947	-471939	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-549803	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	71540	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	71615	-	TSC_hg19_v1_chr7_-_8302174 U38260 L01100 BC008640 BC005922 NM_004968	71997	-	NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa##U38260|ICA1|3382|islet cell autoantigen 1, 69kDa##L01100|ICA1|3382|islet cell autoantigen 1, 69kDa##BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa##BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa	0.978207	CTCF.p2:1:0.978
chr8	143946401	143946525	reg1006621.p1	12.752	+	D84290 NM_002066 BC126336 BC126338	-30242	+	CU689150 BC022806 X82693 AK298639 AK312164 BC031330 NM_003695	-78494	-	NM_023946 NM_177457	-86825	-	X55764 AF478474 BC096285 BC096286 BC096287 NM_000497 NM_001026213	14770	-	AB463555 NM_000498 X54741	52793	-	TSC_hg19_v1_chr8_+_144099945 NM_001127213 NM_002346 AK223074 AK129615 AK311983 BC003392 U42376 Z68179	153479	+	D84290|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##NM_002066|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126336|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126338|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC022806|LY6D|8581|lymphocyte antigen 6 complex, locus D##X82693|LY6D|8581|lymphocyte antigen 6 complex, locus D##AK312164|LY6D|8581|lymphocyte antigen 6 complex, locus D##BC031330|LY6D|8581|lymphocyte antigen 6 complex, locus D##NM_003695|LY6D|8581|lymphocyte antigen 6 complex, locus D##NM_023946|LYNX1|66004|Ly6/neurotoxin 1##NM_177457|LYNX1|66004|Ly6/neurotoxin 1##X55764|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##AF478474|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096285|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096286|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096287|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_000497|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_001026213|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_000498|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##X54741|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##NM_001127213|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002346|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK223074|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK129615|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK311983|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC003392|LY6E|4061|lymphocyte antigen 6 complex, locus E##U42376|LY6E|4061|lymphocyte antigen 6 complex, locus E##Z68179|LY6E|4061|lymphocyte antigen 6 complex, locus E	0.797042	CTCF.p2:-2:0.797
chr8	40851375	40851508	reg1006369.p1	12.751	+	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	-96104	-	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	-840423	+	AK128691 NM_194294	-1058968	+	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	315589	-	TSC_hg19_v1_chr8_+_41348077 NM_001174124 NM_016099	496632	+	TSC_hg19_v1_chr8_+_41348100 AK026613	496658	+	BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1##NM_001174124|GOLGA7|51125|golgin A7##NM_016099|GOLGA7|51125|golgin A7##AK026613|GOLGA7|51125|golgin A7	0.118132	
chr13	80115706	80115817	reg1004592.p1	12.750	+	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-60206	+	TSC_hg19_v1_chr13_+_80055411 AK297197 AK001723	-60339	+	TSC_hg19_v1_chr13_+_80055257 NM_001161407 NM_019080 AB097019 AB097028 AB097029	-60490	+	BC004205 TSC_hg19_v1_chr13_-_80913114	797281	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	799303	-	TSC_hg19_v1_chr13_-_84456424 BC051738	4340664	-	AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##AK297197|NDFIP2|54602|Nedd4 family interacting protein 2##AK001723|NDFIP2|54602|Nedd4 family interacting protein 2##NM_001161407|NDFIP2|54602|Nedd4 family interacting protein 2##NM_019080|NDFIP2|54602|Nedd4 family interacting protein 2##AB097019|NDFIP2|54602|Nedd4 family interacting protein 2##AB097028|NDFIP2|54602|Nedd4 family interacting protein 2##AB097029|NDFIP2|54602|Nedd4 family interacting protein 2##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1	0.990493	CTCF.p2:6:0.990
chr12	4867386	4867515	reg1006950.p1	12.749	+	AJ271385 NM_017417 BC140888 BC140889	-37682	+	TSC_hg19_v1_chr12_+_4758272 NM_005002 BC015837 AF050641 AK308588 BC009311 AK291067 BC111546 L04490	-109172	+	TSC_hg19_v1_chr12_-_4758185 AK292451	-109254	-	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	50965	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	151610	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	285669	+	AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_005002|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC015837|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AF050641|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK308588|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC009311|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK291067|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC111546|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##L04490|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK292451|AKAP3|10566|A kinase (PRKA) anchor protein 3##NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5	0.983347	CTCF.p2:6:0.983
chr2	110493933	110494057	reg1006970.p1	12.749	+	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	-122050	+	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	-122270	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	-122514	-	AL136868 NM_001037866 NM_001123363 NM_032260	56339	+	NM_005054 U64675	57970	+	BC094740 NM_001205288 NM_033514	162013	+	BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3	0.986111	CTCF.p2:6:0.986
chr1	120154373	120154499	reg1005840.p1	12.747	+	NM_000862 S45679 AK291556 BC031999 M35493 X53321 M27137 DQ891161 DQ894342 CU689258 X55997	-104474	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	-196675	+	NM_001166120	-196883	+	NM_001080470	35953	-	NM_006623 AK315360 BC011262 TSC_hg19_v1_chr1_+_120254558 AK309662 AK310132 AF171237 BC000303 BC001349 BC023235 DQ892073 EU176546 AB528378 CR456795	100095	+	CR456850 BC044217 X83618 AK301594 AK313590 TSC_hg19_v1_chr1_-_120311529 AK302276 AK303777 NM_001166107 NM_005518	157074	-	NM_000862|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##S45679|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##AK291556|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##BC031999|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M35493|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X53321|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M27137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ891161|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ894342|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X55997|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_001080470|ZNF697|90874|zinc finger protein 697##NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase##AK315360|PHGDH|26227|phosphoglycerate dehydrogenase##BC011262|PHGDH|26227|phosphoglycerate dehydrogenase##AK309662|PHGDH|26227|phosphoglycerate dehydrogenase##AK310132|PHGDH|26227|phosphoglycerate dehydrogenase##AF171237|PHGDH|26227|phosphoglycerate dehydrogenase##BC000303|PHGDH|26227|phosphoglycerate dehydrogenase##BC001349|PHGDH|26227|phosphoglycerate dehydrogenase##BC023235|PHGDH|26227|phosphoglycerate dehydrogenase##DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase##EU176546|PHGDH|26227|phosphoglycerate dehydrogenase##CR456795|PHGDH|26227|phosphoglycerate dehydrogenase##CR456850|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##BC044217|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##X83618|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK301594|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK313590|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK302276|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK303777|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_001166107|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_005518|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)	0.288824	CTCF.p2:-18:0.289
chr11	41482768	41482893	reg1007058.p1	12.747	+	AB046800 NM_020929	-1167167	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-1168236	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-4863028	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	1850688	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	1850734	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	1850810	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.980505	CTCF.p2:0:0.981
chr11	66650750	66650883	reg1007149.p1	12.747	+	TSC_hg19_v1_chr11_-_66639602 AB527412 CU679988	-11201	-	NM_024036 BC015581 BC007718	-25881	+	TSC_hg19_v1_chr11_+_66624583 BC071866	-26268	+	U30891 NM_022172 TSC_hg19_v1_chr11_-_66675385 S72370 U30890	24564	-	TSC_hg19_v1_chr11_-_66725855 BC011617 AK297705 NM_000920 NM_001040716	75032	-	AK026328 NM_001136485	91934	+	NM_024036|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4##BC015581|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4##BC007718|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4##BC071866|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4##U30891|PC|5091|pyruvate carboxylase##NM_022172|PC|5091|pyruvate carboxylase##S72370|PC|5091|pyruvate carboxylase##U30890|PC|5091|pyruvate carboxylase##BC011617|PC|5091|pyruvate carboxylase##AK297705|PC|5091|pyruvate carboxylase##NM_000920|PC|5091|pyruvate carboxylase##NM_001040716|PC|5091|pyruvate carboxylase##AK026328|C11orf86|254439|chromosome 11 open reading frame 86##NM_001136485|C11orf86|254439|chromosome 11 open reading frame 86	0.528702	CTCF.p2:-3:0.529
chr1	24717879	24718014	reg1006386.p1	12.747	+	AY231160 AY231161 NM_021180	-68417	+	AK074386 TSC_hg19_v1_chr1_+_24645958 AK315164 BC036890 NM_001195010	-71962	+	NM_198173 NM_198174 TSC_hg19_v1_chr1_+_24645846	-72118	+	TSC_hg19_v1_chr1_-_24740273 AK090659 AK299401 AX746563 BC035061 NM_001199013 NM_001199014 NM_178122	22276	-	BC040212 NM_001199012	23640	-	NM_020448 TSC_hg19_v1_chr1_+_24742291 AK312433 BX640883 BC012492 BC001265 BC063583 U90918	24357	+	AY231160|GRHL3|57822|grainyhead-like 3 (Drosophila)##AY231161|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_021180|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK074386|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK315164|GRHL3|57822|grainyhead-like 3 (Drosophila)##BC036890|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_001195010|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_198173|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_198174|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK299401|C1orf201|90529|chromosome 1 open reading frame 201##BC035061|C1orf201|90529|chromosome 1 open reading frame 201##NM_001199013|C1orf201|90529|chromosome 1 open reading frame 201##NM_001199014|C1orf201|90529|chromosome 1 open reading frame 201##NM_178122|C1orf201|90529|chromosome 1 open reading frame 201##BC040212|C1orf201|90529|chromosome 1 open reading frame 201##NM_001199012|C1orf201|90529|chromosome 1 open reading frame 201##NM_020448|NIPAL3|57185|NIPA-like domain containing 3##AK312433|NIPAL3|57185|NIPA-like domain containing 3##BX640883|NIPAL3|57185|NIPA-like domain containing 3##BC012492|NIPAL3|57185|NIPA-like domain containing 3##BC001265|NIPAL3|57185|NIPA-like domain containing 3##BC063583|NIPAL3|57185|NIPA-like domain containing 3##U90918|NIPAL3|57185|NIPA-like domain containing 3	0.843149	CTCF.p2:4:0.843
chr13	23375665	23375786	reg1005695.p1	12.747	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-1130577	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-1197365	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-1197416	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	379390	+	TSC_hg19_v1_chr13_-_23949652 AK125458	573925	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	632115	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.966812	CTCF.p2:-6:0.967
chr5	139243802	139243909	reg1004629.p1	12.747	+	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	-68449	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	-183463	+	AF151029 TSC_hg19_v1_chr5_+_139060229	-183643	+	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	178873	-	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	178990	-	TSC_hg19_v1_chr5_+_139493703 M96684 NM_005859 BC110574 BC110594 BC036087 AB464679 BT019388	249872	+	AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2##M96684|PURA|5813|purine-rich element binding protein A##NM_005859|PURA|5813|purine-rich element binding protein A##BC110574|PURA|5813|purine-rich element binding protein A##BC110594|PURA|5813|purine-rich element binding protein A##BC036087|PURA|5813|purine-rich element binding protein A##BT019388|PURA|5813|purine-rich element binding protein A	0.970779	CTCF.p2:0:0.935
chr10	17784973	17785102	reg1006894.p1	12.746	+	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	-98807	+	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	-125664	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	-288672	-	NM_001098844 BC157856	9217	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	66366	+	NM_001098844 BC157856	256184	+	NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236	0.40393	CTCF.p2:3:0.404
chr11	86529624	86529757	reg1005665.p1	12.746	+	NM_007173 TSC_hg19_v1_chr11_+_86511583 AK316508 AK075362 AK315562 AK304301 AK304054 BC063022 AL136914 BC001278 AF015287 AF193611 AY359033	-18138	+	TSC_hg19_v1_chr11_-_86383659 AK300974 NM_001161586	-146025	-	X79440 TSC_hg19_v1_chr11_-_86383470 NM_006680 AK313695	-146248	-	TSC_hg19_v1_chr11_-_86666094 AY462097	136417	-	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	136698	-	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	219288	+	NM_007173|PRSS23|11098|protease, serine, 23##AK075362|PRSS23|11098|protease, serine, 23##AK315562|PRSS23|11098|protease, serine, 23##AK304301|PRSS23|11098|protease, serine, 23##AK304054|PRSS23|11098|protease, serine, 23##AL136914|PRSS23|11098|protease, serine, 23##BC001278|PRSS23|11098|protease, serine, 23##AF015287|PRSS23|11098|protease, serine, 23##AF193611|PRSS23|11098|protease, serine, 23##AY359033|PRSS23|11098|protease, serine, 23##AK300974|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001161586|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##X79440|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_006680|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK313695|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AY462097|FZD4|8322|frizzled family receptor 4##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135	0.979389	CTCF.p2:19:0.979
chr15	34354257	34354379	reg1004987.p2	12.746	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	-23006	-	AK095198 NM_012125	-93230	+	TSC_hg19_v1_chr15_-_34212524 BC037796	-141760	-	BC012456 TSC_hg19_v1_chr15_-_34394064 AJ250344 NM_020154 AY358445	39723	-	TSC_hg19_v1_chr15_-_34394073 AJ245874 AK314883 BC104934 BC104936	39785	-	AK057200 NM_152595 BC130441	39963	+	BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC012456|C15orf24|56851|chromosome 15 open reading frame 24##AJ250344|C15orf24|56851|chromosome 15 open reading frame 24##NM_020154|C15orf24|56851|chromosome 15 open reading frame 24##AY358445|C15orf24|56851|chromosome 15 open reading frame 24##AJ245874|C15orf24|56851|chromosome 15 open reading frame 24##AK314883|C15orf24|56851|chromosome 15 open reading frame 24##BC104934|C15orf24|56851|chromosome 15 open reading frame 24##BC104936|C15orf24|56851|chromosome 15 open reading frame 24##AK057200|PGBD4|161779|piggyBac transposable element derived 4##NM_152595|PGBD4|161779|piggyBac transposable element derived 4##BC130441|PGBD4|161779|piggyBac transposable element derived 4	0.999744	CTCF.p2:-6:1.000
chr6	11069308	11069453	reg1006176.p1	12.746	+	TSC_hg19_v1_chr6_-_11044539 AK000341 BC060809 BC050278 NM_017770	-24800	-	AK128130 NM_001040274	-182317	+	AF091149 BC069603 AF079550 BC117316 BC117318 NM_004752	-187301	-	TSC_hg19_v1_chr6_+_11094066 AK058186	24677	+	BC032356 NM_001135575 TSC_hg19_v1_chr6_+_11094342	24923	+	AK123938 BC068585 NM_207582	42632	-	AK000341|ELOVL2|54898|ELOVL fatty acid elongase 2##BC060809|ELOVL2|54898|ELOVL fatty acid elongase 2##BC050278|ELOVL2|54898|ELOVL fatty acid elongase 2##NM_017770|ELOVL2|54898|ELOVL fatty acid elongase 2##AK128130|SYCP2L|221711|synaptonemal complex protein 2-like##NM_001040274|SYCP2L|221711|synaptonemal complex protein 2-like##AF091149|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC069603|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AF079550|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117316|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117318|GCM2|9247|glial cells missing homolog 2 (Drosophila)##NM_004752|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AK058186|C6orf228|221710|chromosome 6 open reading frame 228##BC032356|C6orf228|221710|chromosome 6 open reading frame 228##NM_001135575|C6orf228|221710|chromosome 6 open reading frame 228##AK123938|ERVFRD-1|405754|endogenous retrovirus group FRD, member 1##BC068585|ERVFRD-1|405754|endogenous retrovirus group FRD, member 1##NM_207582|ERVFRD-1|405754|endogenous retrovirus group FRD, member 1	0.994683	CTCF.p2:-2:0.995
chr8	115466798	115466924	reg1006792.p1	12.746	+	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	-1017732	-	AB114605 NM_198124	-1077480	-	BC028739 AK313469 AF167082 NM_014379 AK297393	-4479895	-	TSC_hg19_v1_chr8_-_116680208 AK304046	1213359	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	1214304	-	TSC_hg19_v1_chr8_-_116681365 AF183810	1214474	-	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I	0.730391	CTCF.p2:16:0.730
chr1	171972021	171972158	reg1007220.p1	12.745	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-161386	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-221251	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-221275	+	AL035295 NM_139240 BC038410	417739	+	TSC_hg19_v1_chr1_-_172413202 BC006539	441099	-	TSC_hg19_v1_chr1_-_172413207 AK308201	441118	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.721328	CTCF.p2:-12:0.721
chr1	197326190	197326330	reg1007364.p1	12.745	+	NM_001193640 NM_201253 AK299368 AK289733 AK307844 AB208923 AF154671 AY043324 AY043325 BC136271 BC143726 AJ748821	-88823	+	BC132818 BC136600 AK128549 AY163816 NM_194314	-156607	-	AF509326 AY099892 AY367065 AY971955 AY971956 AY971957 BC015396 TSC_hg19_v1_chr1_-_197115800 AK226178 AK125107 NM_001206846 NM_018136	-210566	-	AK000061 TSC_hg19_v1_chr1_-_197552357	226072	-	TSC_hg19_v1_chr1_-_197744376 BC022561	418074	-	TSC_hg19_v1_chr1_-_197744396 BC063456	418136	-	NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)##NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)##AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)##AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)##AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)##AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)##AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)##BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)##BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)##AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)##BC132818|ZBTB41|360023|zinc finger and BTB domain containing 41##BC136600|ZBTB41|360023|zinc finger and BTB domain containing 41##AK128549|ZBTB41|360023|zinc finger and BTB domain containing 41##AY163816|ZBTB41|360023|zinc finger and BTB domain containing 41##NM_194314|ZBTB41|360023|zinc finger and BTB domain containing 41##AF509326|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY099892|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY367065|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971955|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971956|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971957|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##BC015396|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK226178|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK125107|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_001206846|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_018136|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK000061|DENND1B|163486|DENN/MADD domain containing 1B##BC022561|DENND1B|163486|DENN/MADD domain containing 1B##BC063456|DENND1B|163486|DENN/MADD domain containing 1B	0.015342	
chr19	55979262	55979405	reg1007429.p1	12.744	+	NM_001136201 NM_001136202 NM_024710 TSC_hg19_v1_chr19_-_55973052	-6278	-	AK311540 TSC_hg19_v1_chr19_-_55973007 AK027122	-6324	-	BC017344 TSC_hg19_v1_chr19_-_55972980	-6370	-	BC089449 NM_033113	8365	+	TSC_hg19_v1_chr19_+_55996577 NM_020378 AF086533 BC019079 AB038651	17239	+	TSC_hg19_v1_chr19_+_55999863 AK092577 AX747607 NM_001144950 NM_001195267	20531	+	NM_001136201|ISOC2|79763|isochorismatase domain containing 2##NM_001136202|ISOC2|79763|isochorismatase domain containing 2##NM_024710|ISOC2|79763|isochorismatase domain containing 2##AK311540|ISOC2|79763|isochorismatase domain containing 2##AK027122|ISOC2|79763|isochorismatase domain containing 2##BC017344|ISOC2|79763|isochorismatase domain containing 2##BC089449|ZNF628|89887|zinc finger protein 628##NM_033113|ZNF628|89887|zinc finger protein 628##NM_020378|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##AF086533|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##BC019079|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##AB038651|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##AK092577|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##NM_001144950|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##NM_001195267|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)	1.014841	CTCF.p2:0:1.000
chr2	138623657	138623790	reg1006788.p1	12.744	+	NM_001080427	-875262	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-1100607	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-1748047	-	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	98211	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	635670	+	TSC_hg19_v1_chr2_+_139259500 AK021919	635767	+	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like	0.997138	CTCF.p2:-8:0.997
chr1	202688819	202688957	reg1007388.p1	12.742	+	BC100814 BC100815 BC100816 BC100817 AK090672 NM_177402 TSC_hg19_v1_chr1_-_202679575	-9389	-	AK094430 NM_001136504	-76308	-	AB588820 NM_001197131 TSC_hg19_v1_chr1_+_202509319	-179608	+	TSC_hg19_v1_chr1_-_202776401 AK122752	87556	-	TSC_hg19_v1_chr1_-_202777541 AJ132440	88639	-	AF087481 NM_006618 TSC_hg19_v1_chr1_-_202777550	88672	-	BC100814|SYT2|127833|synaptotagmin II##BC100815|SYT2|127833|synaptotagmin II##BC100816|SYT2|127833|synaptotagmin II##BC100817|SYT2|127833|synaptotagmin II##AK090672|SYT2|127833|synaptotagmin II##NM_177402|SYT2|127833|synaptotagmin II##AK094430|SYT2|127833|synaptotagmin II##NM_001136504|SYT2|127833|synaptotagmin II##AB588820|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001197131|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AK122752|KDM5B|10765|lysine (K)-specific demethylase 5B##AJ132440|KDM5B|10765|lysine (K)-specific demethylase 5B##AF087481|KDM5B|10765|lysine (K)-specific demethylase 5B##NM_006618|KDM5B|10765|lysine (K)-specific demethylase 5B	0.905675	CTCF.p2:21:0.906
chr13	113098424	113098527	reg1004880.p2	12.742	+	AK130866 NM_145248 BC016750	-67816	+	NM_005986	-376563	+	BC029889 NM_152324	-1125461	+	AJ003061 AJ003062 BT009772 CU680680 DQ891072 DQ894255 AF042378 TSC_hg19_v1_chr13_-_113242450 BC013781 AK302537 BC007763	143897	-	TSC_hg19_v1_chr13_-_113242468 BC046634 NM_006322	143998	-	TSC_hg19_v1_chr13_-_113242484 AK314785	144016	-	AK130866|SPACA7|122258|sperm acrosome associated 7##NM_145248|SPACA7|122258|sperm acrosome associated 7##BC016750|SPACA7|122258|sperm acrosome associated 7##NM_005986|SOX1|6656|SRY (sex determining region Y)-box 1##BC029889|C13orf16|121793|chromosome 13 open reading frame 16##NM_152324|C13orf16|121793|chromosome 13 open reading frame 16##AJ003061|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AJ003062|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BT009772|TUBGCP3|10426|tubulin, gamma complex associated protein 3##DQ891072|TUBGCP3|10426|tubulin, gamma complex associated protein 3##DQ894255|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AF042378|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC013781|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK302537|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC007763|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC046634|TUBGCP3|10426|tubulin, gamma complex associated protein 3##NM_006322|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK314785|TUBGCP3|10426|tubulin, gamma complex associated protein 3	0.0	
chr20	36621447	36621583	reg1005630.p2	12.741	+	TSC_hg19_v1_chr20_+_36531556 BC033818	-89958	+	NM_080607 AK056177 TSC_hg19_v1_chr20_+_36531528 AL834410	-89999	+	TSC_hg19_v1_chr20_+_36322503 AF370431 AK293420	-299032	+	BC013755 TSC_hg19_v1_chr20_-_36661845 BC013121 NM_014657 AK308164 BC107778	40328	-	TSC_hg19_v1_chr20_+_36661917 NM_021215 DQ372938	40446	+	TSC_hg19_v1_chr20_+_36662168 BC033629 AK312468 BC001696	40652	+	BC033818|VSTM2L|128434|V-set and transmembrane domain containing 2 like##NM_080607|VSTM2L|128434|V-set and transmembrane domain containing 2 like##AK056177|VSTM2L|128434|V-set and transmembrane domain containing 2 like##AL834410|VSTM2L|128434|V-set and transmembrane domain containing 2 like##AF370431|CTNNBL1|56259|catenin, beta like 1##AK293420|CTNNBL1|56259|catenin, beta like 1##BC013755|TTI1|9675|TELO2 interacting protein 1##BC013121|TTI1|9675|TELO2 interacting protein 1##NM_014657|TTI1|9675|TELO2 interacting protein 1##AK308164|TTI1|9675|TELO2 interacting protein 1##BC107778|TTI1|9675|TELO2 interacting protein 1##NM_021215|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##DQ372938|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##BC033629|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##AK312468|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##BC001696|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B	0.990407	CTCF.p2:40:0.990
chr8	12465119	12465249	reg1007201.p1	12.741	+	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-171280	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-171341	-	DQ012022 NM_001037804 NM_001195257	-289360	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	147820	-	AK296010 NM_020844	337982	+	AB040889 NM_001099677	404588	+	BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456	0.999491	CTCF.p2:6:0.999
chr7	102702489	102702607	reg1005649.p1	12.740	+	NM_001031692 NM_005824 TSC_hg19_v1_chr7_+_102553446 AK226021 AK225701 U32907 AK290305 BC027903 AY358889	-149116	+	TSC_hg19_v1_chr7_+_102389473 NM_001145268 NM_001145269 BC029175 AK297455 AK298753 AK054745 DQ893359 DQ896678	-313058	+	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	-390428	-	AK097537 NM_145032	12466	-	AY359238 AY359239 AK095387 BC031285 BC026121 NM_001111038	12681	-	TSC_hg19_v1_chr7_+_102715335 AY150851 AY150852 AY150853 AY150854 NM_001161009 NM_001161010 NM_001161011 NM_001161012 NM_001161013 NM_031905	12768	+	NM_001031692|LRRC17|10234|leucine rich repeat containing 17##NM_005824|LRRC17|10234|leucine rich repeat containing 17##AK226021|LRRC17|10234|leucine rich repeat containing 17##AK225701|LRRC17|10234|leucine rich repeat containing 17##U32907|LRRC17|10234|leucine rich repeat containing 17##AK290305|LRRC17|10234|leucine rich repeat containing 17##BC027903|LRRC17|10234|leucine rich repeat containing 17##AY358889|LRRC17|10234|leucine rich repeat containing 17##NM_001145268|FAM185A|222234|family with sequence similarity 185, member A##NM_001145269|FAM185A|222234|family with sequence similarity 185, member A##BC029175|FAM185A|222234|family with sequence similarity 185, member A##AK297455|FAM185A|222234|family with sequence similarity 185, member A##AK298753|FAM185A|222234|family with sequence similarity 185, member A##AK054745|FAM185A|222234|family with sequence similarity 185, member A##DQ893359|FAM185A|222234|family with sequence similarity 185, member A##DQ896678|FAM185A|222234|family with sequence similarity 185, member A##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK097537|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_145032|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY359238|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY359239|FBXL13|222235|F-box and leucine-rich repeat protein 13##AK095387|FBXL13|222235|F-box and leucine-rich repeat protein 13##BC031285|FBXL13|222235|F-box and leucine-rich repeat protein 13##BC026121|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_001111038|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY150851|ARMC10|83787|armadillo repeat containing 10##AY150852|ARMC10|83787|armadillo repeat containing 10##AY150853|ARMC10|83787|armadillo repeat containing 10##AY150854|ARMC10|83787|armadillo repeat containing 10##NM_001161009|ARMC10|83787|armadillo repeat containing 10##NM_001161010|ARMC10|83787|armadillo repeat containing 10##NM_001161011|ARMC10|83787|armadillo repeat containing 10##NM_001161012|ARMC10|83787|armadillo repeat containing 10##NM_001161013|ARMC10|83787|armadillo repeat containing 10##NM_031905|ARMC10|83787|armadillo repeat containing 10	0.022735	
chr5	157145617	157145740	reg1005389.p1	12.739	+	NM_001145132	-47118	+	BC035142 AK055284 TSC_hg19_v1_chr5_-_157098473 AK302162	-47213	-	AB022083 AB022441 AK308329 AK225861 BC033492 NM_007017 NM_178424	-66279	-	AY463216 NM_017872 TSC_hg19_v1_chr5_+_157158427 AK000553 AK223119 AK304590 BC023521 AL136669 AK021663 AB528251 AM392629 CR533503 BC001523 BC001852 CU674750	12750	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	25062	+	AK055297 TSC_hg19_v1_chr5_+_157184422	38702	+	NM_001145132|C5orf52|100190949|chromosome 5 open reading frame 52##AK302162|SOX30|11063|SRY (sex determining region Y)-box 30##AB022083|SOX30|11063|SRY (sex determining region Y)-box 30##AB022441|SOX30|11063|SRY (sex determining region Y)-box 30##AK308329|SOX30|11063|SRY (sex determining region Y)-box 30##BC033492|SOX30|11063|SRY (sex determining region Y)-box 30##NM_007017|SOX30|11063|SRY (sex determining region Y)-box 30##NM_178424|SOX30|11063|SRY (sex determining region Y)-box 30##AY463216|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##NM_017872|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK000553|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK223119|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK304590|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC023521|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AL136669|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK021663|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##CR533503|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001523|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001852|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated	0.096576	
chr7	143875627	143875732	reg1004660.p1	12.739	+	BC136889 NM_001001659	-49502	+	BC136742 NM_001005480	-69039	+	BC136902 BC136903 NM_001004135	-83509	+	NM_198495 AK292236	4873	+	BC136868 BC136878 EF560743 AK125680 NM_001003702	17040	-	NM_001001802 NM_001005287	54256	-	BC136889|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14##NM_001001659|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14##BC136742|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2##NM_001005480|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2##BC136902|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##BC136903|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##NM_001004135|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##NM_198495|CTAGE4|100128553|CTAGE family, member 4##AK292236|CTAGE8|100142659|CTAGE family, member 8##BC136868|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##BC136878|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##EF560743|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##AK125680|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##NM_001003702|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##NM_001001802|OR2A42|402317|olfactory receptor, family 2, subfamily A, member 42##NM_001005287|OR2A1|346528|olfactory receptor, family 2, subfamily A, member 1	0.957224	CTCF.p2:0:0.932
chr7	99588614	99588730	reg1005187.p2	12.739	+	D90427 M76707 BC014470 AB463407 CU689768 X59766 BC005306 TSC_hg19_v1_chr7_-_99573655 BC005908 BC033830 NM_001185	-14987	-	AB528858 AF503615 AY297109 NM_181538	-61430	-	TSC_hg19_v1_chr7_-_99517154 AF220023 AF220024 AK092892 AX747794 NM_033017 NM_033091	-71477	-	TSC_hg19_v1_chr7_+_99613225 AL833578 NM_003439 AF454940 AK054676 AY260738 BC022378 BX640646 AK091471 AX747005 AK074116	24553	+	BC112224 BC113697 CU692588 EU446909 HQ258578 TSC_hg19_v1_chr7_+_99621246	32493	+	TSC_hg19_v1_chr7_+_99627917 U09848	39266	+	D90427|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##M76707|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC014470|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##X59766|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC005306|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC005908|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC033830|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##NM_001185|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##AF503615|GJC3|349149|gap junction protein, gamma 3, 30.2kDa##AY297109|GJC3|349149|gap junction protein, gamma 3, 30.2kDa##NM_181538|GJC3|349149|gap junction protein, gamma 3, 30.2kDa##AF220023|TRIM4|89122|tripartite motif containing 4##AF220024|TRIM4|89122|tripartite motif containing 4##AK092892|TRIM4|89122|tripartite motif containing 4##NM_033017|TRIM4|89122|tripartite motif containing 4##NM_033091|TRIM4|89122|tripartite motif containing 4##AL833578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##NM_003439|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AF454940|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK054676|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AY260738|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC022378|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BX640646|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK091471|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK074116|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC112224|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC113697|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##EU446909|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##HQ258578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##U09848|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1	0.998634	CTCF.p2:8:0.999
chr15	85421886	85422009	reg1005431.p2	12.738	+	AY044449 NM_020778	-62037	+	TSC_hg19_v1_chr15_+_85291875 BC094688	-130085	+	TSC_hg19_v1_chr15_+_85291820 NM_014630	-130122	+	AK291997 AK296075 AK298369 AK296074 AK296119 AK309571 AK311387 AK309578 AF309632 NM_004213 NM_201651 BC029788	5964	+	TSC_hg19_v1_chr15_+_85523735 BC060762 AK074280 NM_001243137	101755	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	103290	+	AY044449|ALPK3|57538|alpha-kinase 3##NM_020778|ALPK3|57538|alpha-kinase 3##BC094688|ZNF592|9640|zinc finger protein 592##NM_014630|ZNF592|9640|zinc finger protein 592##AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC060762|PDE8A|5151|phosphodiesterase 8A##AK074280|PDE8A|5151|phosphodiesterase 8A##NM_001243137|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A	0.633324	CTCF.p2:-1:0.596
chr16	78537535	78537675	reg1006941.p1	12.738	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-404150	+	NM_001244755	-474620	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	-481155	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	1097010	-	AF125108 NM_130897 BC054892 BC035232	2037283	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	2300442	-	NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2	0.996401	CTCF.p2:-17:0.996
chrX	119115770	119115863	reg1002954.p1	12.737	+	CU677277 CU689374 BC032442 BC015354 BC016783 BC000940 BC012770 TSC_hg19_v1_chrX_-_119077709 BC018968 BC071686 AL832118 AK026279 AY388958 NM_024528	-38143	-	BC066357 NM_001008534 NM_001008535 NM_178813	-85949	+	TSC_hg19_v1_chrX_+_119005794 BC000266 U54993 X81900 AB451304 AB451435 CR456889	-109985	+	AB464156 DQ890992 DQ894169 BC021719 AK058125 AL590524 AF317219 AL590526 NM_001099685 NM_032498	95795	-	AB464155 EU446851 BC103857 BC103858 BC069324 BC069529 AY099086 NM_139282	133994	-	AL590526 NM_001099685 NM_032498 AF317219 AL590524 AK058125 BC021719 AB464156 DQ890992 DQ894169	176745	+	BC032442|NKAP|79576|NFKB activating protein##BC015354|NKAP|79576|NFKB activating protein##BC016783|NKAP|79576|NFKB activating protein##BC000940|NKAP|79576|NFKB activating protein##BC012770|NKAP|79576|NFKB activating protein##BC018968|NKAP|79576|NFKB activating protein##BC071686|NKAP|79576|NFKB activating protein##AL832118|NKAP|79576|NFKB activating protein##AK026279|NKAP|79576|NFKB activating protein##AY388958|NKAP|79576|NFKB activating protein##NM_024528|NKAP|79576|NFKB activating protein##BC066357|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_001008534|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_001008535|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_178813|AKAP14|158798|A kinase (PRKA) anchor protein 14##BC000266|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##U54993|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##X81900|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##AB451304|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##AB451435|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##CR456889|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##EU446851|RHOXF1|158800|Rhox homeobox family, member 1##BC103857|RHOXF1|158800|Rhox homeobox family, member 1##BC103858|RHOXF1|158800|Rhox homeobox family, member 1##BC069324|RHOXF1|158800|Rhox homeobox family, member 1##BC069529|RHOXF1|158800|Rhox homeobox family, member 1##AY099086|RHOXF1|158800|Rhox homeobox family, member 1##NM_139282|RHOXF1|158800|Rhox homeobox family, member 1##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2	0.971873	CTCF.p2:-1:0.972
chr16	5289636	5289779	reg1006767.p1	12.736	+	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	-141939	-	NM_019109 TSC_hg19_v1_chr16_+_5121825 AK075373 BC031095 AB019038 BC004402 AK311475 CU678708 DQ895010 EU176309	-167877	+	TSC_hg19_v1_chr16_-_5116030 BC033681 AY358483 NM_001098514 NM_152459	-173620	-	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	779518	+	TSC_hg19_v1_chr16_+_6533765 BC033885	1244068	+	AK001027 NM_001142334	1534102	+	BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##NM_019109|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK075373|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC031095|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AB019038|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC004402|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK311475|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##DQ895010|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##EU176309|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC033681|C16orf89|146556|chromosome 16 open reading frame 89##AY358483|C16orf89|146556|chromosome 16 open reading frame 89##NM_001098514|C16orf89|146556|chromosome 16 open reading frame 89##NM_152459|C16orf89|146556|chromosome 16 open reading frame 89##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	0.998542	CTCF.p2:8:0.999
chr5	106440501	106440614	reg1005390.p1	12.736	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-3542076	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-3846100	+	BC024591 NM_015216 AB463068	-3975283	+	AK308672 NM_001962 U26403	566033	-	TSC_hg19_v1_chr5_-_107717106 AK126722	1276573	-	BC063316 NM_001163315	1277241	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.403597	CTCF.p2:-5:0.404
chr1	236653289	236653414	reg1003150.p1	12.735	+	AK096339 NM_080738 AY028914 AK291930 BC006533 AY071862	-94529	+	AK290862 AY028913 NM_145861 BC106873 BC106874 BC114557 BC114560 BC128082	-95668	+	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	-208035	-	NM_201545 AK098613	28190	+	AF074000 AF074001 AF074002 NM_006499 NM_201543	33387	+	NM_201544 BC016486	33700	+	AK096339|EDARADD|128178|EDAR-associated death domain##NM_080738|EDARADD|128178|EDAR-associated death domain##AY028914|EDARADD|128178|EDAR-associated death domain##AK291930|EDARADD|128178|EDAR-associated death domain##BC006533|EDARADD|128178|EDAR-associated death domain##AY071862|EDARADD|128178|EDAR-associated death domain##AK290862|EDARADD|128178|EDAR-associated death domain##AY028913|EDARADD|128178|EDAR-associated death domain##NM_145861|EDARADD|128178|EDAR-associated death domain##BC114557|EDARADD|128178|EDAR-associated death domain##BC114560|EDARADD|128178|EDAR-associated death domain##BC128082|EDARADD|128178|EDAR-associated death domain##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_201545|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AK098613|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AF074000|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AF074001|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AF074002|LGALS8|3964|lectin, galactoside-binding, soluble, 8##NM_006499|LGALS8|3964|lectin, galactoside-binding, soluble, 8##NM_201543|LGALS8|3964|lectin, galactoside-binding, soluble, 8##NM_201544|LGALS8|3964|lectin, galactoside-binding, soluble, 8##BC016486|LGALS8|3964|lectin, galactoside-binding, soluble, 8	0.998809	CTCF.p2:40:0.999
chr19	36207924	36208057	reg1001380.p2	12.735	+	AF130255 NM_014383	-4161	+	BC107097 BC107098 NM_007000 AF085807	-50274	+	TSC_hg19_v1_chr19_+_36139253 D28426 BC002478 X54473 X13923	-68738	+	TSC_hg19_v1_chr19_+_36208923 AJ007041 NM_014727	940	+	TSC_hg19_v1_chr19_+_36209125 AF186605	1196	+	BC126481 BC126483 BC144205 AX775837 AK026226 NM_024660	25340	-	AF130255|ZBTB32|27033|zinc finger and BTB domain containing 32##NM_014383|ZBTB32|27033|zinc finger and BTB domain containing 32##BC107097|UPK1A|11045|uroplakin 1A##BC107098|UPK1A|11045|uroplakin 1A##NM_007000|UPK1A|11045|uroplakin 1A##AF085807|UPK1A|11045|uroplakin 1A##D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##AF186605|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##BC126481|IGFLR1|79713|IGF-like family receptor 1##BC126483|IGFLR1|79713|IGF-like family receptor 1##BC144205|IGFLR1|79713|IGF-like family receptor 1##AX775837|IGFLR1|79713|IGF-like family receptor 1##AK026226|IGFLR1|79713|IGF-like family receptor 1##NM_024660|IGFLR1|79713|IGF-like family receptor 1	0.973868	CTCF.p2:15:0.974
chr20	43312287	43312428	reg1006637.p1	12.735	+	BC007678 TSC_hg19_v1_chr20_-_43280372 BC040226 NM_000022	-31982	-	AB528992 DQ892681 DQ895924 TSC_hg19_v1_chr20_-_43280341 X02994 AK223397	-32059	-	AK309209 TSC_hg19_v1_chr20_+_43211227	-101134	+	BC058074 TSC_hg19_v1_chr20_+_43343549 AK074695	31185	+	NM_003881 BC017782 TSC_hg19_v1_chr20_+_43343953	31563	+	TSC_hg19_v1_chr20_+_43344010 AK313853 BC064379 AF083500 AF074604 AY358915 CU687868	31660	+	BC007678|ADA|100|adenosine deaminase##BC040226|ADA|100|adenosine deaminase##NM_000022|ADA|100|adenosine deaminase##DQ892681|ADA|100|adenosine deaminase##DQ895924|ADA|100|adenosine deaminase##X02994|ADA|100|adenosine deaminase##AK223397|ADA|100|adenosine deaminase##AK309209|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##BC058074|WISP2|8839|WNT1 inducible signaling pathway protein 2##NM_003881|WISP2|8839|WNT1 inducible signaling pathway protein 2##BC017782|WISP2|8839|WNT1 inducible signaling pathway protein 2##AK313853|WISP2|8839|WNT1 inducible signaling pathway protein 2##BC064379|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF083500|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF074604|WISP2|8839|WNT1 inducible signaling pathway protein 2##AY358915|WISP2|8839|WNT1 inducible signaling pathway protein 2	0.979203	CTCF.p2:5:0.979
chr21	37915231	37915354	reg1005088.p4	12.735	+	AJ566765 NM_001146078	-395	-	AF314090 AY355348 NM_001146079 NM_144492	-62905	-	BC012126 NM_012130 AY355349	-76561	-	AJ566766 NM_001146077	33574	-	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	156148	+	NM_005069 NM_009586 BC110444	156713	+	AJ566765|CLDN14|23562|claudin 14##NM_001146078|CLDN14|23562|claudin 14##AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14##AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14##NM_005069|SIM2|6493|single-minded homolog 2 (Drosophila)##NM_009586|SIM2|6493|single-minded homolog 2 (Drosophila)##BC110444|SIM2|6493|single-minded homolog 2 (Drosophila)	0.0	
chr22	25047002	25047140	reg1005183.p1	12.735	+	TSC_hg19_v1_chr22_+_25003637 NM_001032365	-43448	+	AL832738 TSC_hg19_v1_chr22_+_24999158 NM_001032364 BC035341 NM_005265 L20494 J04131	-47878	+	TSC_hg19_v1_chr22_-_24989036 BC032388 BC108684 NM_207644 AK097054	-58059	-	AB079368 NM_001008496 AK302409 AK315806	123613	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	155139	+	BC130647 BC130649 CR456388 NM_001001663	288241	-	NM_001032365|GGT1|2678|gamma-glutamyltransferase 1##AL832738|GGT1|2678|gamma-glutamyltransferase 1##NM_001032364|GGT1|2678|gamma-glutamyltransferase 1##BC035341|GGT1|2678|gamma-glutamyltransferase 1##NM_005265|GGT1|2678|gamma-glutamyltransferase 1##L20494|GGT1|2678|gamma-glutamyltransferase 1##J04131|GGT1|2678|gamma-glutamyltransferase 1##BC032388|FAM211B|388886|family with sequence similarity 211, member B##BC108684|FAM211B|388886|family with sequence similarity 211, member B##NM_207644|FAM211B|388886|family with sequence similarity 211, member B##AK097054|FAM211B|388886|family with sequence similarity 211, member B##AB079368|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001008496|PIWIL3|440822|piwi-like 3 (Drosophila)##AK302409|PIWIL3|440822|piwi-like 3 (Drosophila)##AK315806|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211	0.92641	CTCF.p2:-35:0.926
chr4	15397961	15398098	reg1005285.p2	12.735	+	NM_001135171	-21855	+	BX647781 NM_001135170 AK314802 BC022187 BC024015	-56444	+	TSC_hg19_v1_chr4_+_15005451 AY247744 AY255519 BC103939 BC103940 BC103941 BC103942 BC105925	-392568	+	NM_031911 AF329839	31618	+	NM_001080522 NM_001164720 NM_020785 AK096047 AK309178 BX647334 BC061921 BC053865 BC070395 EU450799	73545	+	TSC_hg19_v1_chr4_+_15480833 AB037766 BC103710	82820	+	NM_001135171|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AY247744|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##AY255519|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103939|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103940|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103941|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103942|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC105925|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001080522|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_001164720|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_020785|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AK096047|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AK309178|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BX647334|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC061921|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC053865|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC070395|CC2D2A|57545|coiled-coil and C2 domain containing 2A##EU450799|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A	0.957593	CTCF.p2:-3:0.958
chr12	89444995	89445125	reg1007559.p1	12.734	+	BC074725 AK293002 AF119835 AF400437 BC126166 BC143899 BC069797 BC069733 BC069783 TSC_hg19_v1_chr12_-_88974249 AF400436 M59964 AK290319 NM_000899 NM_003994	-470888	-	TSC_hg19_v1_chr12_+_88536083 AK290436 AK302755 AK310375 AK310393 NM_181783 CR749309 BX538169 CR749244 CR933632 AJ697717 BC117177 BC117175	-908912	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	-909191	-	TSC_hg19_v1_chr12_+_89744716 AK124265	299692	+	TSC_hg19_v1_chr12_-_89745782 AB451265 AB451393 BT006895 CU678402 AB463588 DQ892490 DQ895701	300725	-	TSC_hg19_v1_chr12_-_89746181 BC003143 BC003562 AB013382 AB013602 X93920 AK222882	301031	-	BC074725|KITLG|4254|KIT ligand##AK293002|KITLG|4254|KIT ligand##AF119835|KITLG|4254|KIT ligand##AF400437|KITLG|4254|KIT ligand##BC126166|KITLG|4254|KIT ligand##BC143899|KITLG|4254|KIT ligand##BC069797|KITLG|4254|KIT ligand##BC069733|KITLG|4254|KIT ligand##BC069783|KITLG|4254|KIT ligand##AF400436|KITLG|4254|KIT ligand##M59964|KITLG|4254|KIT ligand##AK290319|KITLG|4254|KIT ligand##NM_000899|KITLG|4254|KIT ligand##NM_003994|KITLG|4254|KIT ligand##AK290436|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK302755|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310375|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310393|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##NM_181783|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749309|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BX538169|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749244|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR933632|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AJ697717|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117177|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117175|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa##AK124265|LOC100131490|100131490|uncharacterized LOC100131490##AB451265|DUSP6|1848|dual specificity phosphatase 6##AB451393|DUSP6|1848|dual specificity phosphatase 6##BT006895|DUSP6|1848|dual specificity phosphatase 6##DQ892490|DUSP6|1848|dual specificity phosphatase 6##DQ895701|DUSP6|1848|dual specificity phosphatase 6##BC003143|DUSP6|1848|dual specificity phosphatase 6##BC003562|DUSP6|1848|dual specificity phosphatase 6##AB013382|DUSP6|1848|dual specificity phosphatase 6##AB013602|DUSP6|1848|dual specificity phosphatase 6##X93920|DUSP6|1848|dual specificity phosphatase 6##AK222882|DUSP6|1848|dual specificity phosphatase 6	0.920305	CTCF.p2:-11:0.920
chr17	18973743	18973893	reg1007354.p1	12.734	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-23532	-	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-65739	-	AK057946 NM_001042450 NM_152351 AK298345 BC062617 BC034380	-118314	+	BC157869 NM_001129778	56963	+	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	166890	+	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	292151	-	BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##AK057946|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001042450|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_152351|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##AK298345|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC062617|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC034380|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1	0.940264	CTCF.p2:10:0.940
chr21	32570939	32571098	reg1005664.p2	12.734	+	AB096964 NM_001099219	-160224	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	-317160	-	AJ457063 AB096962 NM_181606	-369030	-	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	360340	-	TSC_hg19_v1_chr21_+_33032005 NM_000454 AK312116 BC001034 X02317 EF151142 AB464254 AY049787 AY450286 BT006676 CR450355 CR541742 CU674512 EF143990	460989	+	AB032998 AK025748 AL117417 TSC_hg19_v1_chr21_-_33074136	503100	-	AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##NM_000454|SOD1|6647|superoxide dismutase 1, soluble##AK312116|SOD1|6647|superoxide dismutase 1, soluble##BC001034|SOD1|6647|superoxide dismutase 1, soluble##X02317|SOD1|6647|superoxide dismutase 1, soluble##EF151142|SOD1|6647|superoxide dismutase 1, soluble##AY049787|SOD1|6647|superoxide dismutase 1, soluble##AY450286|SOD1|6647|superoxide dismutase 1, soluble##BT006676|SOD1|6647|superoxide dismutase 1, soluble##CR450355|SOD1|6647|superoxide dismutase 1, soluble##CR541742|SOD1|6647|superoxide dismutase 1, soluble##EF143990|SOD1|6647|superoxide dismutase 1, soluble##AB032998|SCAF4|57466|SR-related CTD-associated factor 4##AK025748|SCAF4|57466|SR-related CTD-associated factor 4##AL117417|SCAF4|57466|SR-related CTD-associated factor 4	0.995353	CTCF.p2:-23:0.995
chr8	71580716	71580851	reg1006436.p1	12.734	+	TSC_hg19_v1_chr8_-_71520654 AK303411 NM_014294	-60127	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	-60261	-	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	-264757	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	601	-	TSC_hg19_v1_chr8_-_71581419 BC000878 BC008505 NM_016027	666	-	AY534247 BC111381 NM_001011720 BC151845 BC137104 BC137105	857	+	AK303411|TRAM1|23471|translocation associated membrane protein 1##NM_014294|TRAM1|23471|translocation associated membrane protein 1##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1##NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2##BC000878|LACTB2|51110|lactamase, beta 2##BC008505|LACTB2|51110|lactamase, beta 2##NM_016027|LACTB2|51110|lactamase, beta 2##AY534247|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC111381|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##NM_001011720|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC151845|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137104|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137105|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9	0.676268	CTCF.p2:-4:0.676
chr11	124633157	124633298	reg1006938.p1	12.733	+	CU677755 DQ891768 DQ894952 BC016868 TSC_hg19_v1_chr11_-_124632187 AF361746 AY358382 AK075396 AK301160 AK314710 NM_138961	-1091	-	AY358897 TSC_hg19_v1_chr11_-_124622152 BC012567	-11076	-	TSC_hg19_v1_chr11_-_124622090 AK000460 BC007313 NM_014312	-11131	-	TSC_hg19_v1_chr11_-_124670282 AK303902	37042	-	TSC_hg19_v1_chr11_-_124670286 BC064919 AK026995 NM_024631	37092	-	AY509035 TSC_hg19_v1_chr11_+_124735327 AK056544 NM_022370 AK291045	102098	+	DQ891768|ESAM|90952|endothelial cell adhesion molecule##DQ894952|ESAM|90952|endothelial cell adhesion molecule##BC016868|ESAM|90952|endothelial cell adhesion molecule##AF361746|ESAM|90952|endothelial cell adhesion molecule##AY358382|ESAM|90952|endothelial cell adhesion molecule##AK075396|ESAM|90952|endothelial cell adhesion molecule##AK301160|ESAM|90952|endothelial cell adhesion molecule##AK314710|ESAM|90952|endothelial cell adhesion molecule##NM_138961|ESAM|90952|endothelial cell adhesion molecule##AY358897|VSIG2|23584|V-set and immunoglobulin domain containing 2##BC012567|VSIG2|23584|V-set and immunoglobulin domain containing 2##AK000460|VSIG2|23584|V-set and immunoglobulin domain containing 2##BC007313|VSIG2|23584|V-set and immunoglobulin domain containing 2##NM_014312|VSIG2|23584|V-set and immunoglobulin domain containing 2##AK303902|C11orf61|79684|chromosome 11 open reading frame 61##BC064919|C11orf61|79684|chromosome 11 open reading frame 61##AK026995|C11orf61|79684|chromosome 11 open reading frame 61##NM_024631|C11orf61|79684|chromosome 11 open reading frame 61##AY509035|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##NM_022370|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK291045|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)	0.993533	CTCF.p2:0:0.994
chr15	74913538	74913645	reg1002252.p1	12.733	+	AK293769 TSC_hg19_v1_chr15_+_74908195 BC019881 CR933693 AK291983 AK301689 BC002555 AK225680 BC006103	-5370	+	AK091692 AX747131 NM_001130028	-6257	+	L29217 L29220 NM_003992	-12879	+	AK024781 AK225099 TSC_hg19_v1_chr15_-_74988340 AF193058	74741	-	TSC_hg19_v1_chr15_-_74988360 BC011534 BC021271 AK056339 NM_001142443 NM_001142444 NM_025083	74772	-	AK310810 AM233517 AM233518 AM233519 AM233520 AM236046 AM236047 BC023019 AY871801 K03191 AK223108 AK223113 AK313880 NM_000499	104202	-	AK293769|CLK3|1198|CDC-like kinase 3##BC019881|CLK3|1198|CDC-like kinase 3##CR933693|CLK3|1198|CDC-like kinase 3##AK291983|CLK3|1198|CDC-like kinase 3##AK301689|CLK3|1198|CDC-like kinase 3##BC002555|CLK3|1198|CDC-like kinase 3##AK225680|CLK3|1198|CDC-like kinase 3##BC006103|CLK3|1198|CDC-like kinase 3##AK091692|CLK3|1198|CDC-like kinase 3##NM_001130028|CLK3|1198|CDC-like kinase 3##L29217|CLK3|1198|CDC-like kinase 3##L29220|CLK3|1198|CDC-like kinase 3##NM_003992|CLK3|1198|CDC-like kinase 3##AK024781|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK225099|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AF193058|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC011534|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC021271|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK056339|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142443|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142444|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_025083|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK310810|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233517|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233518|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233519|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233520|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236046|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236047|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC023019|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AY871801|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##K03191|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223108|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223113|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK313880|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##NM_000499|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1	1.096526	CTCF.p2:-14:0.950
chr17	73422514	73422637	reg1004721.p1	12.733	+	NM_002086 NM_203506 TSC_hg19_v1_chr17_-_73401791	-20772	-	TSC_hg19_v1_chr17_-_73401781 AK315565	-20796	-	TSC_hg19_v1_chr17_-_73401738 BC000631	-20841	-	NM_014738 TSC_hg19_v1_chr17_+_73452737 AK308160 BC042942 AK304819 D83779 BC045540	30163	+	AK316060 TSC_hg19_v1_chr17_+_73472617 AK294526 CR936809	50027	+	AK300354 NM_001142643 AK315936	83366	-	NM_002086|GRB2|2885|growth factor receptor-bound protein 2##NM_203506|GRB2|2885|growth factor receptor-bound protein 2##AK315565|GRB2|2885|growth factor receptor-bound protein 2##BC000631|GRB2|2885|growth factor receptor-bound protein 2##NM_014738|KIAA0195|9772|KIAA0195##AK308160|KIAA0195|9772|KIAA0195##BC042942|KIAA0195|9772|KIAA0195##AK304819|KIAA0195|9772|KIAA0195##D83779|KIAA0195|9772|KIAA0195##BC045540|KIAA0195|9772|KIAA0195##AK316060|KIAA0195|9772|KIAA0195##AK294526|KIAA0195|9772|KIAA0195##CR936809|KIAA0195|9772|KIAA0195##AK300354|CASKIN2|57513|CASK interacting protein 2##NM_001142643|CASKIN2|57513|CASK interacting protein 2##AK315936|CASKIN2|57513|CASK interacting protein 2	0.238763	CTCF.p2:-6:0.239
chr18	46190758	46190853	reg1005209.p2	12.733	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-125032	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-255096	-	AM988836 AK296709 NM_001039360 EF120357	-527106	-	AK131394 NM_001190823	278342	-	AK301535 NM_001190822	284897	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	285962	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.945699	CTCF.p2:9:0.871
chr3	11420840	11420940	reg1002750.p1	12.733	+	AK314504 TSC_hg19_v1_chr3_+_11314092 BC000091 AF094516	-106794	+	AK298833 TSC_hg19_v1_chr3_+_11314082 AK075221 AK303694	-106813	+	TSC_hg19_v1_chr3_+_11314033 NM_001136031 NM_001144912 NM_006395	-106884	+	TSC_hg19_v1_chr3_-_11610264 AK308761 NM_001128221	189440	-	AK307708 TSC_hg19_v1_chr3_-_11623831 NM_001128220	202943	-	TSC_hg19_v1_chr3_-_11685397 NM_001128219	264506	-	AK314504|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##BC000091|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AF094516|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK298833|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK075221|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK303694|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_001136031|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_001144912|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_006395|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK308761|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128221|VGLL4|9686|vestigial like 4 (Drosophila)##AK307708|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)	0.0	
chr4	147940360	147940464	reg1004576.p1	12.733	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	-73414	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	-380321	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	-497416	-	NM_001166055 NM_001957 AK315931 TSC_hg19_v1_chr4_+_148402083	461663	+	TSC_hg19_v1_chr4_+_148402117 D90348 S57498 X61950	461711	+	TSC_hg19_v1_chr4_+_148402244 AK312812 BC022511 AK304451 S45956	461898	+	AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001166055|EDNRA|1909|endothelin receptor type A##NM_001957|EDNRA|1909|endothelin receptor type A##AK315931|EDNRA|1909|endothelin receptor type A##D90348|EDNRA|1909|endothelin receptor type A##S57498|EDNRA|1909|endothelin receptor type A##X61950|EDNRA|1909|endothelin receptor type A##AK312812|EDNRA|1909|endothelin receptor type A##BC022511|EDNRA|1909|endothelin receptor type A##AK304451|EDNRA|1909|endothelin receptor type A##S45956|EDNRA|1909|endothelin receptor type A	0.606815	CTCF.p2:-12:0.607
chr18	60990380	60990487	reg1005298.p2	12.732	+	TSC_hg19_v1_chr18_-_60987309 M13994	-3147	-	TSC_hg19_v1_chr18_-_60986977 X06487	-3440	-	BC027258 NM_000633 NM_000657	-3873	-	AB529042 BT006782 AK312360 TSC_hg19_v1_chr18_-_61034440 AK297670 AK025120 X63657 BC008797 NM_002035	43994	-	CU691728 EU831666 EU831748 AY232629 TSC_hg19_v1_chr18_-_61089613	99122	-	TSC_hg19_v1_chr18_-_61089648 AK291253	99214	-	M13994|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##BT006782|KDSR|2531|3-ketodihydrosphingosine reductase##AK312360|KDSR|2531|3-ketodihydrosphingosine reductase##AK297670|KDSR|2531|3-ketodihydrosphingosine reductase##AK025120|KDSR|2531|3-ketodihydrosphingosine reductase##X63657|KDSR|2531|3-ketodihydrosphingosine reductase##BC008797|KDSR|2531|3-ketodihydrosphingosine reductase##NM_002035|KDSR|2531|3-ketodihydrosphingosine reductase##EU831666|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##EU831748|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AY232629|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK291253|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)	0.983468	CTCF.p2:13:0.983
chr2	80114995	80115122	reg1007617.p1	12.732	+	TSC_hg19_v1_chr2_+_79740175 AK295181	-374843	+	NM_001164883 NM_004389 BC052996 TSC_hg19_v1_chr2_+_79740147 BC040458	-374950	+	AK291973 AK311523 AK311523 AK311526 NM_138938 NM_002580 NM_138937	-728180	-	AB587576 AY182024 HQ257885 TSC_hg19_v1_chr2_-_80530981	415905	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	416467	-	TSC_hg19_v1_chr2_-_80531719 AK290512	416667	-	AK295181|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_001164883|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_004389|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC052996|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC040458|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##AK291973|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311526|REG3A|5068|regenerating islet-derived 3 alpha##NM_138938|REG3A|5068|regenerating islet-derived 3 alpha##NM_002580|REG3A|5068|regenerating islet-derived 3 alpha##NM_138937|REG3A|5068|regenerating islet-derived 3 alpha##AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##HQ257885|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	0.99673	CTCF.p2:7:0.997
chr6	42515404	42515546	reg1005921.p1	12.732	+	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	-95652	-	TSC_hg19_v1_chr6_-_42185603 NM_018141	-329858	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-329875	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	16275	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	16302	+	TSC_hg19_v1_chr6_+_42531956 AY061884 CU687884	16529	+	AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.982703	CTCF.p2:28:0.983
chr1	162362022	162362139	reg1006532.p1	12.731	+	AK125122 NM_001085375 BC127743 BC127744	-10495	+	AK293907 NM_001135240	-13385	+	AB463503 CU689584 AY248900 BC032957 NM_182581	-15469	-	AF256653 AF403479 DQ891975 DQ895166 AB590415 AK097162 AK314743 AF484964 BC066595 BC022407 NM_053282	19786	-	AK058195 NM_001184763	104883	+	NM_144624 NM_175866 TSC_hg19_v1_chr1_+_162467614	105526	+	AK125122|C1orf226|400793|chromosome 1 open reading frame 226##NM_001085375|C1orf226|400793|chromosome 1 open reading frame 226##BC127743|C1orf226|400793|chromosome 1 open reading frame 226##BC127744|C1orf226|400793|chromosome 1 open reading frame 226##AK293907|C1orf226|400793|chromosome 1 open reading frame 226##NM_001135240|C1orf226|400793|chromosome 1 open reading frame 226##AY248900|C1orf111|284680|chromosome 1 open reading frame 111##BC032957|C1orf111|284680|chromosome 1 open reading frame 111##NM_182581|C1orf111|284680|chromosome 1 open reading frame 111##AF256653|SH2D1B|117157|SH2 domain containing 1B##AF403479|SH2D1B|117157|SH2 domain containing 1B##DQ891975|SH2D1B|117157|SH2 domain containing 1B##DQ895166|SH2D1B|117157|SH2 domain containing 1B##AK097162|SH2D1B|117157|SH2 domain containing 1B##AK314743|SH2D1B|117157|SH2 domain containing 1B##AF484964|SH2D1B|117157|SH2 domain containing 1B##BC066595|SH2D1B|117157|SH2 domain containing 1B##BC022407|SH2D1B|117157|SH2 domain containing 1B##NM_053282|SH2D1B|117157|SH2 domain containing 1B##AK058195|UHMK1|127933|U2AF homology motif (UHM) kinase 1##NM_001184763|UHMK1|127933|U2AF homology motif (UHM) kinase 1##NM_144624|UHMK1|127933|U2AF homology motif (UHM) kinase 1##NM_175866|UHMK1|127933|U2AF homology motif (UHM) kinase 1	0.412401	CTCF.p2:0:0.412
chr16	9102739	9102873	reg1004580.p2	12.731	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-45511	-	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	-139946	-	NM_001042476 BC001333	-140554	-	TSC_hg19_v1_chr16_+_9185545 NM_014117	82734	+	TSC_hg19_v1_chr16_+_9185577 BC113570	82797	+	BC143273 U09002 NM_001134408	1173027	-	NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##BC113570|C16orf72|29035|chromosome 16 open reading frame 72##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.993506	CTCF.p2:3:0.994
chr18	72675891	72676016	reg1004673.p1	12.731	+	NM_001146189 NM_001146190 NM_017757	-333035	+	TSC_hg19_v1_chr18_+_72265126 AK056288	-410822	+	TSC_hg19_v1_chr18_-_72265072 BC036588	-410893	-	TSC_hg19_v1_chr18_-_72920993 CU687330 CU689738	245048	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	245159	-	BC018081 NM_175907 TSC_hg19_v1_chr18_-_72921324	245352	-	NM_001146189|ZNF407|55628|zinc finger protein 407##NM_001146190|ZNF407|55628|zinc finger protein 407##NM_017757|ZNF407|55628|zinc finger protein 407##AK056288|ZNF407|55628|zinc finger protein 407##BC036588|LOC400657|400657|uncharacterized LOC400657##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	0.442368	CTCF.p2:12:0.442
chr3	51409526	51409638	reg1006732.p1	12.731	+	AY254099 NM_004947 AY145303	-696900	+	TSC_hg19_v1_chr3_+_50654932 AK313565 U43784 AB528893 EU832627 EU832702 CU675717 AB451303 AB451434	-754650	+	BC001662 BC010407 TSC_hg19_v1_chr3_+_50654611 BC007591 U09578	-754955	+	NM_006010 TSC_hg19_v1_chr3_+_51422691	13109	+	TSC_hg19_v1_chr3_+_51422721 BC113588 BC113590 AK292243 BC007282 BT007110 EU832655 EU832733 BC033055	13199	+	NM_013286 TSC_hg19_v1_chr3_+_51428706	19120	+	AY254099|DOCK3|1795|dedicator of cytokinesis 3##NM_004947|DOCK3|1795|dedicator of cytokinesis 3##AY145303|DOCK3|1795|dedicator of cytokinesis 3##AK313565|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U43784|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832627|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832702|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451303|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451434|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC001662|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC010407|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC007591|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U09578|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##NM_006010|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113588|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113590|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AK292243|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC007282|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BT007110|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832655|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832733|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC033055|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##NM_013286|RBM15B|29890|RNA binding motif protein 15B	0.931901	CTCF.p2:0:0.932
chr4	151130691	151130796	reg1004831.p2	12.731	+	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	-131218	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-1767159	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-1767404	-	NM_006439	372333	+	TSC_hg19_v1_chr4_-_151770612 AB208838	639906	-	TSC_hg19_v1_chr4_-_151773972 BC172218	643251	-	AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.995561	CTCF.p2:2:0.996
chr19	19250578	19250692	reg1006147.p1	12.730	+	TSC_hg19_v1_chr19_-_19249268 BC005210 AK096964	-1360	-	TSC_hg19_v1_chr19_-_19249264 AK225424 AK000429 NM_017814	-1381	-	TSC_hg19_v1_chr19_+_19174802 NM_178526 BC045598 FN356975	-75826	+	TSC_hg19_v1_chr19_-_19281067 AK057210	30432	-	TSC_hg19_v1_chr19_-_19281094 NM_001145785	30458	-	TSC_hg19_v1_chr19_-_19302962 X68502 EU831418 EU831443 EU831511 EU831535 X63380 BC064537 BC000489 BC004449 BC010178 BC010931 AK301086 AK316328 BC157868 BC171869	52329	-	BC005210|TMEM161A|54929|transmembrane protein 161A##AK096964|TMEM161A|54929|transmembrane protein 161A##AK225424|TMEM161A|54929|transmembrane protein 161A##AK000429|TMEM161A|54929|transmembrane protein 161A##NM_017814|TMEM161A|54929|transmembrane protein 161A##NM_178526|SLC25A42|284439|solute carrier family 25, member 42##BC045598|SLC25A42|284439|solute carrier family 25, member 42##FN356975|SLC25A42|284439|solute carrier family 25, member 42##AK057210|MEF2B|100271849|myocyte enhancer factor 2B##NM_001145785|MEF2B|100271849|myocyte enhancer factor 2B##X68502|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##EU831418|MEF2BNB|729991|MEF2B neighbor##EU831443|MEF2BNB|729991|MEF2B neighbor##EU831511|MEF2BNB|729991|MEF2B neighbor##EU831535|MEF2BNB|729991|MEF2B neighbor##X63380|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##BC064537|MEF2BNB|729991|MEF2B neighbor##BC000489|MEF2BNB|729991|MEF2B neighbor##BC004449|MEF2BNB|729991|MEF2B neighbor##BC010178|MEF2BNB|729991|MEF2B neighbor##BC010931|MEF2BNB|729991|MEF2B neighbor##AK301086|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##AK316328|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##BC157868|MEF2BNB|729991|MEF2B neighbor##BC171869|MEF2BNB|729991|MEF2B neighbor	0.301136	CTCF.p2:-7:0.301
chr9	36328913	36329060	reg1006579.p1	12.730	+	AM697709 AM697708 AK296687 AK312539 NM_001128227 NM_001190388	-51995	-	TSC_hg19_v1_chr9_-_36258446 BC121179 AK295562 NM_001190383 NM_001190384 NM_005476	-70547	-	TSC_hg19_v1_chr9_+_36191041 AB463527 CU676418 BT007170 DQ270158	-137946	+	TSC_hg19_v1_chr9_-_36375965 AK024996 DQ895235 EU176239	47014	-	AL136817 BC033786 NM_022781 NM_194329	71267	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	71911	-	AM697709|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##AM697708|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##AK296687|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##AK312539|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##NM_001128227|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##NM_001190388|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##BC121179|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##AK295562|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##NM_001190383|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##NM_001190384|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##NM_005476|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##BT007170|CLTA|1211|clathrin, light chain A##DQ270158|CLTA|1211|clathrin, light chain A##AK024996|RNF38|152006|ring finger protein 38##DQ895235|RNF38|152006|ring finger protein 38##EU176239|RNF38|152006|ring finger protein 38##AL136817|RNF38|152006|ring finger protein 38##BC033786|RNF38|152006|ring finger protein 38##NM_022781|RNF38|152006|ring finger protein 38##NM_194329|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38	0.641428	CTCF.p2:22:0.641
chr6	35107791	35107914	reg1006301.p1	12.729	+	TSC_hg19_v1_chr6_+_34857037 BC022396 NM_015245 D86982 BC031934 BC086310 AK298987 BC132832 BC144341 AB385297	-250752	+	AF118094 AB464280 BT019404 BT019405 CR542068 DQ893239 DQ896569 TSC_hg19_v1_chr6_-_34855820 AK313475 BC021972 D63705 AK302226 NM_005643 X83928	-252147	-	TSC_hg19_v1_chr6_+_34759872 AK000309 BC108710 BX640641 AB126777 BC137120 BC137127	-347963	+	AK057234 AK316403 AF536532 BC040003 BC033729 BC090050 AK301778 AK302022 TSC_hg19_v1_chr6_-_35109091 AK098590 AK301975 AK302456 AK302375 AK315078 BC048418 AF536533 NM_001093728 NM_018679	1242	-	TSC_hg19_v1_chr6_+_35181732 BC052263 AK291218	74016	+	TSC_hg19_v1_chr6_+_35182182 AF452494 NM_152753 EU832354 EU832439 AY639608	74336	+	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##AF118094|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BT019404|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BT019405|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##CR542068|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##DQ893239|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##DQ896569|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##AK313475|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BC021972|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##D63705|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##AK302226|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##NM_005643|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##X83928|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BX640641|UHRF1BP1|54887|UHRF1 binding protein 1##AB126777|UHRF1BP1|54887|UHRF1 binding protein 1##BC137120|UHRF1BP1|54887|UHRF1 binding protein 1##BC137127|UHRF1BP1|54887|UHRF1 binding protein 1##AK057234|TCP11|6954|t-complex 11 homolog (mouse)##AK316403|TCP11|6954|t-complex 11 homolog (mouse)##AF536532|TCP11|6954|t-complex 11 homolog (mouse)##BC040003|TCP11|6954|t-complex 11 homolog (mouse)##BC033729|TCP11|6954|t-complex 11 homolog (mouse)##BC090050|TCP11|6954|t-complex 11 homolog (mouse)##AK301778|TCP11|6954|t-complex 11 homolog (mouse)##AK302022|TCP11|6954|t-complex 11 homolog (mouse)##AK098590|TCP11|6954|t-complex 11 homolog (mouse)##AK301975|TCP11|6954|t-complex 11 homolog (mouse)##AK302456|TCP11|6954|t-complex 11 homolog (mouse)##AK302375|TCP11|6954|t-complex 11 homolog (mouse)##AK315078|TCP11|6954|t-complex 11 homolog (mouse)##BC048418|TCP11|6954|t-complex 11 homolog (mouse)##AF536533|TCP11|6954|t-complex 11 homolog (mouse)##NM_001093728|TCP11|6954|t-complex 11 homolog (mouse)##NM_018679|TCP11|6954|t-complex 11 homolog (mouse)##BC052263|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AK291218|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AF452494|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##NM_152753|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##EU832354|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##EU832439|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AY639608|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3	0.520038	CTCF.p2:16:0.520
chr3	15419858	15420001	reg1004482.p2	12.728	+	BC006169 NM_001018009	-37042	-	TSC_hg19_v1_chr3_-_15374094 AL117422 AK313167 NM_004844	-45832	-	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	-45988	-	TSC_hg19_v1_chr3_-_15469037 BC022400 AK057791 NM_152396 AK293370	49089	-	TSC_hg19_v1_chr3_+_15469073 NM_033083 AK312330 AK304697 BC041329 AF272973 CU691982	49239	+	AK128401 NM_080538	120449	-	BC006169|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_001018009|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AL117422|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AK313167|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_004844|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC022400|METTL6|131965|methyltransferase like 6##AK057791|METTL6|131965|methyltransferase like 6##NM_152396|METTL6|131965|methyltransferase like 6##AK293370|METTL6|131965|methyltransferase like 6##NM_033083|EAF1|85403|ELL associated factor 1##AK312330|EAF1|85403|ELL associated factor 1##AK304697|EAF1|85403|ELL associated factor 1##BC041329|EAF1|85403|ELL associated factor 1##AF272973|EAF1|85403|ELL associated factor 1##AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	0.983835	CTCF.p2:14:0.984
chr9	126116461	126116589	reg1005357.p1	12.728	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-85637	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	-85705	-	TSC_hg19_v1_chr9_-_125941308 BC002693	-175205	-	NM_173689 AK123000 DQ426866 AY720432	1968	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	575786	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	657358	+	AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein##BC002693|STRBP|55342|spermatid perinuclear RNA binding protein##NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2	0.073899	
chr9	139524961	139525083	reg1000791.p2	12.728	+	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	-84772	-	TSC_hg19_v1_chr9_-_139378220 AB593115	-146780	-	BC036221 NM_152571 AK055336	-147052	+	NM_016215 AL512735 AY358903 BC088371 AY358902	32379	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	35193	+	BC012377 TSC_hg19_v1_chr9_+_139560248	35249	+	AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7##BC012377|EGFL7|51162|EGF-like-domain, multiple 7	0.238217	CTCF.p2:15:0.238
chr19	42069881	42069993	reg1004832.p2	12.727	+	NM_001130514	-120875	+	TSC_hg19_v1_chr19_-_41945831 AK298197 NM_001167869 NM_001167870 NM_001167871 NM_018035	-124104	-	TSC_hg19_v1_chr19_-_41945814 BC013323 AK316313	-124123	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	12640	+	D90276 AK298701 NM_001817	63497	-	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	122215	-	NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##AK298197|ATP5SL|55101|ATP5S-like##NM_001167869|ATP5SL|55101|ATP5S-like##NM_001167870|ATP5SL|55101|ATP5S-like##NM_001167871|ATP5SL|55101|ATP5S-like##NM_018035|ATP5SL|55101|ATP5S-like##BC013323|ATP5SL|55101|ATP5S-like##AK316313|ATP5SL|55101|ATP5S-like##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7	0.0	
chr6	121751713	121751854	reg1007847.p1	12.726	+	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	-96140	-	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-2080862	-	BX538186 AK091682 AX747126 NM_001100411	-2281437	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	5042	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	968912	+	TSC_hg19_v1_chr6_+_122720796 AK225593 AK225594 BC112323 M65217 AK294624 BC005329 BC064622 BC121050 BC121051 BC128420 AK316377 AB463722 CU675115 EU446897	969033	+	AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2##AK225593|HSF2|3298|heat shock transcription factor 2##AK225594|HSF2|3298|heat shock transcription factor 2##BC112323|HSF2|3298|heat shock transcription factor 2##M65217|HSF2|3298|heat shock transcription factor 2##AK294624|HSF2|3298|heat shock transcription factor 2##BC005329|HSF2|3298|heat shock transcription factor 2##BC064622|HSF2|3298|heat shock transcription factor 2##BC121050|HSF2|3298|heat shock transcription factor 2##BC121051|HSF2|3298|heat shock transcription factor 2##BC128420|HSF2|3298|heat shock transcription factor 2##AK316377|HSF2|3298|heat shock transcription factor 2##EU446897|HSF2|3298|heat shock transcription factor 2	0.499481	CTCF.p2:-11:0.499
chr20	34787781	34787898	reg1005440.p1	12.725	+	TSC_hg19_v1_chr20_+_34742659 NM_012156 AB002336	-45174	+	CR936825 NM_177996	-87537	+	TSC_hg19_v1_chr20_+_34680631 AK096848 AK299817 AK126875 BC040259	-107188	+	TSC_hg19_v1_chr20_+_34824399 AL117419	36550	+	TSC_hg19_v1_chr20_+_34824402 BC001751 BC019311 NM_015511	36584	+	TSC_hg19_v1_chr20_+_34894262 AB023181	106416	+	NM_012156|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AB002336|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##CR936825|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##NM_177996|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK096848|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK299817|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK126875|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##BC040259|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AL117419|C20orf4|25980|chromosome 20 open reading frame 4##BC001751|C20orf4|25980|chromosome 20 open reading frame 4##BC019311|C20orf4|25980|chromosome 20 open reading frame 4##NM_015511|C20orf4|25980|chromosome 20 open reading frame 4##AB023181|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4	0.686258	CTCF.p2:2:0.686
chr1	158968575	158968729	reg1007132.p1	12.724	+	NM_152501 NM_198928 NM_198929 NM_198930 AY185344 AY185345 AY185346 AY185347 BC090944 AK308350 BC020822 BC073133 BC114470 BC139741	-67293	+	TSC_hg19_v1_chr1_+_158801140 BC020715 BC032319 AK290392 AK313210 M81750 NM_002432	-167516	+	NM_001005278	-221228	-	NM_001206567 NM_005531 TSC_hg19_v1_chr1_+_158979716 AF208043 M63838 AB208989 BC017059 AF086545 AK296228 AK307957	11138	+	AK292042 BC010940 AF024714 NM_004833	77948	-	AK289541 NM_021189 TSC_hg19_v1_chr1_+_159141404 AK308915 NM_001127173 AF363367 AY358332 AF062733 BC033819 AY046418 AF529206 DQ890848 DQ894002	172813	+	NM_152501|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198928|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198929|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198930|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185344|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185345|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185346|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185347|PYHIN1|149628|pyrin and HIN domain family, member 1##BC090944|PYHIN1|149628|pyrin and HIN domain family, member 1##AK308350|PYHIN1|149628|pyrin and HIN domain family, member 1##BC020822|PYHIN1|149628|pyrin and HIN domain family, member 1##BC073133|PYHIN1|149628|pyrin and HIN domain family, member 1##BC114470|PYHIN1|149628|pyrin and HIN domain family, member 1##BC139741|PYHIN1|149628|pyrin and HIN domain family, member 1##BC020715|MNDA|4332|myeloid cell nuclear differentiation antigen##BC032319|MNDA|4332|myeloid cell nuclear differentiation antigen##AK290392|MNDA|4332|myeloid cell nuclear differentiation antigen##AK313210|MNDA|4332|myeloid cell nuclear differentiation antigen##M81750|MNDA|4332|myeloid cell nuclear differentiation antigen##NM_002432|MNDA|4332|myeloid cell nuclear differentiation antigen##NM_001005278|OR6N2|81442|olfactory receptor, family 6, subfamily N, member 2##NM_001206567|IFI16|3428|interferon, gamma-inducible protein 16##NM_005531|IFI16|3428|interferon, gamma-inducible protein 16##AF208043|IFI16|3428|interferon, gamma-inducible protein 16##M63838|IFI16|3428|interferon, gamma-inducible protein 16##AB208989|IFI16|3428|interferon, gamma-inducible protein 16##BC017059|IFI16|3428|interferon, gamma-inducible protein 16##AF086545|IFI16|3428|interferon, gamma-inducible protein 16##AK296228|IFI16|3428|interferon, gamma-inducible protein 16##AK307957|IFI16|3428|interferon, gamma-inducible protein 16##AK292042|AIM2|9447|absent in melanoma 2##BC010940|AIM2|9447|absent in melanoma 2##AF024714|AIM2|9447|absent in melanoma 2##NM_004833|AIM2|9447|absent in melanoma 2##AK289541|CADM3|57863|cell adhesion molecule 3##NM_021189|CADM3|57863|cell adhesion molecule 3##AK308915|CADM3|57863|cell adhesion molecule 3##NM_001127173|CADM3|57863|cell adhesion molecule 3##AF363367|CADM3|57863|cell adhesion molecule 3##AY358332|CADM3|57863|cell adhesion molecule 3##AF062733|CADM3|57863|cell adhesion molecule 3##BC033819|CADM3|57863|cell adhesion molecule 3##AY046418|CADM3|57863|cell adhesion molecule 3##AF529206|CADM3|57863|cell adhesion molecule 3##DQ890848|CADM3|57863|cell adhesion molecule 3##DQ894002|CADM3|57863|cell adhesion molecule 3	0.999716	CTCF.p2:9:1.000
chr5	157170610	157170750	reg1005039.p2	12.724	+	AY463216 NM_017872 TSC_hg19_v1_chr5_+_157158427 AK000553 AK223119 AK304590 BC023521 AL136669 AK021663 AB528251 AM392629 CR533503 BC001523 BC001852 CU674750	-12252	+	NM_001145132	-72120	+	BC035142 AK055284 TSC_hg19_v1_chr5_-_157098473 AK302162	-72215	-	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	60	+	AK055297 TSC_hg19_v1_chr5_+_157184422	13700	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	115410	-	AY463216|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##NM_017872|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK000553|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK223119|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK304590|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC023521|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AL136669|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK021663|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##CR533503|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001523|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001852|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##NM_001145132|C5orf52|100190949|chromosome 5 open reading frame 52##AK302162|SOX30|11063|SRY (sex determining region Y)-box 30##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1	1.495925	CTCF.p2:26:0.991	CTCF.p2:-29:0.505
chr8	62051682	62051847	reg1005295.p1	12.724	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-460362	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-460476	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-622014	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	148786	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	550582	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	575254	-	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase	0.999849	CTCF.p2:3:1.000
chr10	98400769	98400911	reg1006527.p1	12.723	+	TSC_hg19_v1_chr10_-_98346798 AF269150 BC136788 BC136789 BC144412 NM_020123	-54017	-	TSC_hg19_v1_chr10_-_98346770 AK314348	-54062	-	TSC_hg19_v1_chr10_-_98346739 AF160213	-54168	-	BX648550 TSC_hg19_v1_chr10_-_98480272 AK125635 NM_152309	79401	-	TSC_hg19_v1_chr10_+_98592020 NM_001170765 NM_001170766 AL832106 AK308356 BC053359	191213	+	TSC_hg19_v1_chr10_-_98592186 AB593180	191360	-	AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3##BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3##AK314348|TM9SF3|56889|transmembrane 9 superfamily member 3##AF160213|TM9SF3|56889|transmembrane 9 superfamily member 3##BX648550|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AK125635|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_152309|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor##AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor##BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor	0.993652	CTCF.p2:-34:0.963
chr22	20850852	20850988	reg1005486.p1	12.723	+	AK222850 TSC_hg19_v1_chr22_-_20850077 AK290669 AK294682 AK027266 BC015923 NM_032775	-798	-	TSC_hg19_v1_chr22_-_20792108 AB024433 AF522196 NM_153334 NM_182895	-58794	-	AB052951 TSC_hg19_v1_chr22_-_20792077	-58858	-	TSC_hg19_v1_chr22_+_20861871 AK315540	10946	+	TSC_hg19_v1_chr22_+_20861877 AK074268	10956	+	TSC_hg19_v1_chr22_+_20861884 NM_001003891 NM_015889	10964	+	AK222850|KLHL22|84861|kelch-like 22 (Drosophila)##AK290669|KLHL22|84861|kelch-like 22 (Drosophila)##AK294682|KLHL22|84861|kelch-like 22 (Drosophila)##AK027266|KLHL22|84861|kelch-like 22 (Drosophila)##BC015923|KLHL22|84861|kelch-like 22 (Drosophila)##NM_032775|KLHL22|84861|kelch-like 22 (Drosophila)##AB024433|SCARF2|91179|scavenger receptor class F, member 2##AF522196|SCARF2|91179|scavenger receptor class F, member 2##NM_153334|SCARF2|91179|scavenger receptor class F, member 2##NM_182895|SCARF2|91179|scavenger receptor class F, member 2##AB052951|SCARF2|91179|scavenger receptor class F, member 2##AK315540|MED15|51586|mediator complex subunit 15##AK074268|MED15|51586|mediator complex subunit 15##NM_001003891|MED15|51586|mediator complex subunit 15##NM_015889|MED15|51586|mediator complex subunit 15	0.346337	CTCF.p2:10:0.346
chr18	3246128	3246251	reg1004551.p2	12.722	+	TSC_hg19_v1_chr18_-_3219987 AJ621424 AK125322 NM_003803 NM_019856	-26144	-	BC116183 BC116184 TSC_hg19_v1_chr18_-_3219875	-26329	-	BC152448 D87436 NM_014646	-234245	-	BC031972 NM_006471	1338	+	TSC_hg19_v1_chr18_+_3247798 DQ185044	1604	+	TSC_hg19_v1_chr18_+_3247815 X54304	1626	+	AJ621424|MYOM1|8736|myomesin 1, 185kDa##AK125322|MYOM1|8736|myomesin 1, 185kDa##NM_003803|MYOM1|8736|myomesin 1, 185kDa##NM_019856|MYOM1|8736|myomesin 1, 185kDa##BC116183|MYOM1|8736|myomesin 1, 185kDa##BC116184|MYOM1|8736|myomesin 1, 185kDa##BC152448|LPIN2|9663|lipin 2##D87436|LPIN2|9663|lipin 2##NM_014646|LPIN2|9663|lipin 2##BC031972|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric##NM_006471|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric##DQ185044|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric##X54304|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric	0.165401	
chr1	16142137	16142262	reg1005137.p1	12.721	+	TSC_hg19_v1_chr1_-_16134192 NM_001089591	-8007	-	NM_001024216 AB463637 DQ891730 DQ894907 AY180161	-50731	+	AF459643 NM_001024215 AK027444	-51188	+	BC012991 TSC_hg19_v1_chr1_-_16161389	19135	-	TSC_hg19_v1_chr1_-_16162350 AK094772	20157	-	AF356524 NM_015001 TSC_hg19_v1_chr1_+_16174380	32180	+	NM_001089591|UQCRHL|440567|ubiquinol-cytochrome c reductase hinge protein-like##NM_001024216|FBLIM1|54751|filamin binding LIM protein 1##DQ891730|FBLIM1|54751|filamin binding LIM protein 1##DQ894907|FBLIM1|54751|filamin binding LIM protein 1##AY180161|FBLIM1|54751|filamin binding LIM protein 1##AF459643|FBLIM1|54751|filamin binding LIM protein 1##NM_001024215|FBLIM1|54751|filamin binding LIM protein 1##AK027444|FBLIM1|54751|filamin binding LIM protein 1##AK094772|FLJ37453|729614|uncharacterized LOC729614##AF356524|SPEN|23013|spen homolog, transcriptional regulator (Drosophila)##NM_015001|SPEN|23013|spen homolog, transcriptional regulator (Drosophila)	0.984473	CTCF.p2:5:0.984
chr1	221376932	221377045	reg1006415.p1	12.721	+	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	-323889	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	-324074	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	-324227	+	NM_144728	533813	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	538420	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	538442	-	DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##NM_144728|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10	0.999744	CTCF.p2:5:1.000
chr22	38330044	38330196	reg1006346.p1	12.721	+	TSC_hg19_v1_chr22_+_38302345 AJ496196 CR456437 AB463117 BC142605 BC143050 CU013036 CU013324 AL834373	-27722	+	TSC_hg19_v1_chr22_+_38302165 NM_033386	-27991	+	AL357455 CU674548 CU688616 TSC_hg19_v1_chr22_+_38245452 DQ891842 DQ893595 DQ895030 EU176311 AK093540 AX748192	-84652	+	CR456440 BC031998 AK057349 NM_032561 NM_001207062	19484	-	TSC_hg19_v1_chr22_+_38349705 NM_021974 BC003582 AK094034 AK311128 AK311831 AX748424 CR456546 CU013146 CU013434 AB463187 CR457021	19612	+	BT020029 CR536571 AB489148 CU013183 CU013471 CU678224 DQ893172 DQ896471 TSC_hg19_v1_chr22_-_38379842	49702	-	AJ496196|MICALL1|85377|MICAL-like 1##CR456437|MICALL1|85377|MICAL-like 1##BC142605|MICALL1|85377|MICAL-like 1##BC143050|MICALL1|85377|MICAL-like 1##AL834373|MICALL1|85377|MICAL-like 1##NM_033386|MICALL1|85377|MICAL-like 1##AL357455|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ891842|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ893595|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ895030|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##EU176311|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##AK093540|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##CR456440|C22orf23|84645|chromosome 22 open reading frame 23##BC031998|C22orf23|84645|chromosome 22 open reading frame 23##AK057349|C22orf23|84645|chromosome 22 open reading frame 23##NM_032561|C22orf23|84645|chromosome 22 open reading frame 23##NM_001207062|C22orf23|84645|chromosome 22 open reading frame 23##NM_021974|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##BC003582|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK094034|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK311128|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK311831|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CR456546|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CU013146|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CU013434|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CR457021|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##BT020029|SOX10|6663|SRY (sex determining region Y)-box 10##CR536571|SOX10|6663|SRY (sex determining region Y)-box 10##CU013183|SOX10|6663|SRY (sex determining region Y)-box 10##CU013471|SOX10|6663|SRY (sex determining region Y)-box 10##DQ893172|SOX10|6663|SRY (sex determining region Y)-box 10##DQ896471|SOX10|6663|SRY (sex determining region Y)-box 10	0.0	
chr22	43784461	43784579	reg1007402.p1	12.721	+	AB528481 AF525689 BC127263 BC047916 TSC_hg19_v1_chr22_-_43739356 AK127719 NM_173050	-45182	-	TSC_hg19_v1_chr22_-_43583141 NM_015140	-201364	-	D63487 AL590888 CT841516 TSC_hg19_v1_chr22_-_43583100 BC001070	-201426	-	TSC_hg19_v1_chr22_+_43808019 AK290541 AK297276 AK299516 AK299531 NM_001044370	23497	+	TSC_hg19_v1_chr22_+_43808109 AK289774	23597	+	BC039315 TSC_hg19_v1_chr22_-_44208121 AK296679 AK292498 AK292411 AK058069 NM_022785 NM_198856	423621	-	AF525689|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC127263|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC047916|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##AK127719|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##NM_173050|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##NM_015140|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##D63487|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##AL590888|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##CT841516|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##BC001070|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##AK290541|MPPED1|758|metallophosphoesterase domain containing 1##AK297276|MPPED1|758|metallophosphoesterase domain containing 1##AK299516|MPPED1|758|metallophosphoesterase domain containing 1##AK299531|MPPED1|758|metallophosphoesterase domain containing 1##NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1##AK289774|MPPED1|758|metallophosphoesterase domain containing 1##BC039315|EFCAB6|64800|EF-hand calcium binding domain 6##AK296679|EFCAB6|64800|EF-hand calcium binding domain 6##AK292498|EFCAB6|64800|EF-hand calcium binding domain 6##AK292411|EFCAB6|64800|EF-hand calcium binding domain 6##AK058069|EFCAB6|64800|EF-hand calcium binding domain 6##NM_022785|EFCAB6|64800|EF-hand calcium binding domain 6##NM_198856|EFCAB6|64800|EF-hand calcium binding domain 6	0.999086	CTCF.p2:0:0.999
chr11	65537407	65537526	reg1004976.p2	12.720	+	TSC_hg19_v1_chr11_-_65488270 DQ892277 DQ895477 AF312034 AK024627 AK225131 AK297660 BC023588 AF346606 NM_032193	-49191	-	TSC_hg19_v1_chr11_-_65487976 L08647	-49497	-	BC117167 BC143290 BC143296 BC093032 TSC_hg19_v1_chr11_+_65479722 AK304664 BC064912 U67734 AB463743 HQ258620 BC013211 BC000166 U40989	-57691	+	NM_138368	10355	-	NM_004561 BC059408 TSC_hg19_v1_chr11_+_65554533	17057	+	TSC_hg19_v1_chr11_+_65554569 AK291711 BX648725	17129	+	DQ892277|RNASEH2C|84153|ribonuclease H2, subunit C##DQ895477|RNASEH2C|84153|ribonuclease H2, subunit C##AF312034|RNASEH2C|84153|ribonuclease H2, subunit C##AK024627|RNASEH2C|84153|ribonuclease H2, subunit C##AK225131|RNASEH2C|84153|ribonuclease H2, subunit C##AK297660|RNASEH2C|84153|ribonuclease H2, subunit C##BC023588|RNASEH2C|84153|ribonuclease H2, subunit C##AF346606|RNASEH2C|84153|ribonuclease H2, subunit C##NM_032193|RNASEH2C|84153|ribonuclease H2, subunit C##L08647|RNASEH2C|84153|ribonuclease H2, subunit C##BC117167|KAT5|10524|K(lysine) acetyltransferase 5##BC143290|KAT5|10524|K(lysine) acetyltransferase 5##BC143296|KAT5|10524|K(lysine) acetyltransferase 5##BC093032|KAT5|10524|K(lysine) acetyltransferase 5##AK304664|KAT5|10524|K(lysine) acetyltransferase 5##BC064912|KAT5|10524|K(lysine) acetyltransferase 5##U67734|KAT5|10524|K(lysine) acetyltransferase 5##HQ258620|KAT5|10524|K(lysine) acetyltransferase 5##BC013211|KAT5|10524|K(lysine) acetyltransferase 5##BC000166|KAT5|10524|K(lysine) acetyltransferase 5##U40989|KAT5|10524|K(lysine) acetyltransferase 5##NM_138368|DKFZp761E198|91056|adaptor protein 5##NM_004561|OVOL1|5017|ovo-like 1(Drosophila)##BC059408|OVOL1|5017|ovo-like 1(Drosophila)##AK291711|OVOL1|5017|ovo-like 1(Drosophila)##BX648725|OVOL1|5017|ovo-like 1(Drosophila)	0.423323	CTCF.p2:-5:0.423
chr3	156392038	156392160	reg1000590.p2	12.720	+	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	-119156	-	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	-119218	-	NM_172159 BC043166 AK127240	-383289	+	NM_015508	105	+	AK291261 TSC_hg19_v1_chr3_+_156392402 BX537965 BC050350	303	+	CR749647 NM_001184717	615	+	AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##CR749647|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184717|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	0.0	
chr4_ctg9_hap1	71737	71834	reg1005146.p1	12.720	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.912026	CTCF.p2:-8:0.295	CTCF.p2:11:0.752	CTCF.p2:-32:0.865
chr17	46962158	46962275	reg1005659.p2	12.719	+	NM_005831 AK293329 TSC_hg19_v1_chr17_+_46908406 AK293137 AK303313 AK304024 AK310648 AK314796 U22897 AK222666 AK223227 AK298177 BC004130	-53826	+	AK097392 AK302952 BC041368 AL834151 NM_001130918	-67792	-	CU689652 BC033563 NM_173623 AK310321	-90571	-	AK095669 TSC_hg19_v1_chr17_+_46970178 NM_001002027 NM_005175 AL080089 AK311848 D13118	7969	+	TSC_hg19_v1_chr17_+_46985768 NM_023079 AK296865	23529	+	AK130303 TSC_hg19_v1_chr17_+_46985840 AK024030 AK122770	23618	+	NM_005831|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293329|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293137|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK303313|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK304024|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK314796|CALCOCO2|10241|calcium binding and coiled-coil domain 2##U22897|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK222666|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK223227|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK298177|CALCOCO2|10241|calcium binding and coiled-coil domain 2##BC004130|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK097392|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK302952|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC041368|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AL834151|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_001130918|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC033563|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_173623|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK310321|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK095669|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_001002027|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_005175|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AL080089|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AK311848|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##D13118|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_023079|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK296865|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK130303|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK024030|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK122770|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z	0.993925	CTCF.p2:-4:0.994
chr8	7212860	7212978	reg1005250.p1	12.718	+	TSC_hg19_v1_chr8_-_7212868 AK307331 AK302471	-43	-	NM_001164453	-60384	+	NM_001164455	-68006	+	NM_001164457	7570	-	NM_001205266	61434	-	AB590071 AF217245 AF516673 AB037972 AJ237673 NM_018661 AF295370	74749	-	AK302471|FAM66B|100128890|family with sequence similarity 66, member B##NM_001164453|FAM90A20|728430|family with sequence similarity 90, member A20##NM_001164455|FAM90A5|441315|family with sequence similarity 90, member A5##NM_001164457|ZNF705G|100131980|zinc finger protein 705G##NM_001205266|DEFB4B|100289462|defensin, beta 4B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AF295370|DEFB103B|55894|defensin, beta 103B	0.853235	CTCF.p2:-4:0.400	CTCF.p2:7:0.453
chr1	201417343	201417483	reg1003055.p1	12.717	+	AJ315823 BC012601 TSC_hg19_v1_chr1_-_201390859 AK223588 J04760 AK311896 AL831820 AL831975 BC012600 BX510903 NM_003281	-26554	-	TSC_hg19_v1_chr1_-_201368726 BC071890	-48672	-	BX647307 U42408 TSC_hg19_v1_chr1_-_201368661 BC009742 NM_005558	-48768	-	BC014390 TSC_hg19_v1_chr1_-_201438317 AF151100 AK075179 AK222644 BC068273 NM_012396	20852	-	AK293053 NM_001193572	48287	-	AK290133 NM_001193571	58553	-	AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)##AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)##J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)##AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)##AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)##AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)##BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)##NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC071890|LAD1|3898|ladinin 1##BX647307|LAD1|3898|ladinin 1##U42408|LAD1|3898|ladinin 1##BC009742|LAD1|3898|ladinin 1##NM_005558|LAD1|3898|ladinin 1##BC014390|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AF151100|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK075179|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK222644|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##BC068273|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##NM_012396|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK293053|CSRP1|1465|cysteine and glycine-rich protein 1##NM_001193572|CSRP1|1465|cysteine and glycine-rich protein 1##AK290133|CSRP1|1465|cysteine and glycine-rich protein 1##NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1	0.999671	CTCF.p2:-6:1.000
chr8	9688565	9688733	reg1005602.p1	12.717	+	TSC_hg19_v1_chr8_+_9413439 BC023578 AF082556 NM_003747 AK301798	-275168	+	TSC_hg19_v1_chr8_+_9413423 AK302031	-275226	+	TSC_hg19_v1_chr8_+_9413421 BC098394	-275244	+	TSC_hg19_v1_chr8_+_9911765 AY958429	223120	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	223230	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	264414	+	BC023578|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AF082556|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##NM_003747|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK301798|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK302031|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##BC098394|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AY958429|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A	2.967252	CTCF.p2:-11:0.989	CTCF.p2:39:0.989	CTCF.p2:-62:0.989
chr17	68140492	68140635	reg1006942.p1	12.716	+	BC033038 NM_170742	-39569	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-69133	+	TSC_hg19_v1_chr17_+_67498396 U39064	-642083	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	25133	+	TSC_hg19_v1_chr17_-_70116937 AL833139	1976375	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	1976596	+	BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9	0.99891	CTCF.p2:5:0.999
chr17	33860438	33860576	reg1005614.p1	12.715	+	NM_001195790	-45750	-	TSC_hg19_v1_chr17_-_33775787 CR749630 AK056514 AL832726 AK122750 NM_144682	-84696	-	AK001122 BC035605 NM_018042	-100977	-	BC140847 BC157877 BC157879 NM_001129820	24600	-	BC031085 AK312635 BC015751 U91521 NM_000286	45098	-	TSC_hg19_v1_chr17_+_33914281 NM_001030006 NM_001282 M34175 AK295667	53783	+	NM_001195790|SLFN12L|100506736|schlafen family member 12-like##CR749630|SLFN13|146857|schlafen family member 13##AK056514|SLFN13|146857|schlafen family member 13##AL832726|SLFN13|146857|schlafen family member 13##AK122750|SLFN13|146857|schlafen family member 13##NM_144682|SLFN13|146857|schlafen family member 13##AK001122|SLFN12|55106|schlafen family member 12##BC035605|SLFN12|55106|schlafen family member 12##NM_018042|SLFN12|55106|schlafen family member 12##BC140847|SLFN14|342618|schlafen family member 14##BC157877|SLFN14|342618|schlafen family member 14##BC157879|SLFN14|342618|schlafen family member 14##NM_001129820|SLFN14|342618|schlafen family member 14##BC031085|PEX12|5193|peroxisomal biogenesis factor 12##AK312635|PEX12|5193|peroxisomal biogenesis factor 12##BC015751|PEX12|5193|peroxisomal biogenesis factor 12##U91521|PEX12|5193|peroxisomal biogenesis factor 12##NM_000286|PEX12|5193|peroxisomal biogenesis factor 12##NM_001030006|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##NM_001282|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##M34175|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AK295667|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit	0.7215	CTCF.p2:16:0.722
chr11	1714580	1714688	reg1002519.p1	12.714	+	AB126074 AJ628247 NM_001001480	-63616	+	AB528165 AB126073 NM_001012709	-71289	-	AY597812 AB528164 AB126072 NM_001012708	-84981	-	AB126075 NM_001012416 BC130399 BC133035	3804	+	TSC_hg19_v1_chr11_-_1769086 AK289574	54506	-	NM_001170820 TSC_hg19_v1_chr11_-_1771824	57190	-	AB126074|KRTAP5-5|439915|keratin associated protein 5-5##AJ628247|KRTAP5-5|439915|keratin associated protein 5-5##NM_001001480|KRTAP5-5|439915|keratin associated protein 5-5##AB126073|KRTAP5-4|387267|keratin associated protein 5-4##NM_001012709|KRTAP5-4|387267|keratin associated protein 5-4##AY597812|KRTAP5-3|387266|keratin associated protein 5-3##AB126072|KRTAP5-3|387266|keratin associated protein 5-3##NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3##AB126075|KRTAP5-6|440023|keratin associated protein 5-6##NM_001012416|KRTAP5-6|440023|keratin associated protein 5-6##BC130399|KRTAP5-6|440023|keratin associated protein 5-6##BC133035|KRTAP5-6|440023|keratin associated protein 5-6##AK289574|IFITM10|402778|interferon induced transmembrane protein 10##NM_001170820|IFITM10|402778|interferon induced transmembrane protein 10	0.996464	CTCF.p2:-20:0.973
chr11	20149939	20150051	reg1005235.p2	12.714	+	AK290458 TSC_hg19_v1_chr11_+_20070637	-79372	+	TSC_hg19_v1_chr11_+_20049136 AK307574	-100863	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	-105607	+	NM_001029865	31874	-	NM_006410 TSC_hg19_v1_chr11_+_20385245 NM_001098521	235247	+	TSC_hg19_v1_chr11_+_20385268 AK292092 NM_001098520	235286	+	AK290458|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##NM_001029865|DBX1|120237|developing brain homeobox 1##NM_006410|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098521|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AK292092|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098520|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa	1.044752	CTCF.p2:-14:1.000
chrX	39009118	39009247	reg1006774.p1	12.714	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-345642	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-345722	+	BC008908 NM_021242	-346110	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	947510	-	BC114220 NM_001123383 NM_001123384	1027399	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	1431004	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.952267	CTCF.p2:6:0.952
chr9	14465603	14465730	reg1005092.p1	12.713	+	AK131233 NM_001190738	-66685	-	TSC_hg19_v1_chr9_-_14314141 BX648845 NM_001190737 NM_005596	-151576	-	TSC_hg19_v1_chr9_-_14313945 U70862	-151714	-	AF161360 TSC_hg19_v1_chr9_-_14693311 AK292960	227654	-	TSC_hg19_v1_chr9_-_14693475 BC042558 NM_178566	227803	-	AF400435 BC069371 BC069405 BC069491 BC069503 BC103976 BC103977 CU686794 CU686860 NM_005454	257025	-	AK131233|NFIB|4781|nuclear factor I/B##NM_001190738|NFIB|4781|nuclear factor I/B##BX648845|NFIB|4781|nuclear factor I/B##NM_001190737|NFIB|4781|nuclear factor I/B##NM_005596|NFIB|4781|nuclear factor I/B##U70862|NFIB|4781|nuclear factor I/B##AF161360|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AK292960|ZDHHC21|340481|zinc finger, DHHC-type containing 21##BC042558|ZDHHC21|340481|zinc finger, DHHC-type containing 21##NM_178566|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AF400435|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069371|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069405|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069491|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069503|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC103976|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC103977|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##NM_005454|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)	0.071315	
chr1	148532048	148532170	reg1006804.p1	12.712	+	NM_001164261 NM_001164262	-329574	-	TSC_hg19_v1_chr1_-_148176396 BC110832	-355713	-	AL117237 NM_015383 BC094705	-506255	-	NM_001170755 AK097180	26118	+	NM_173638 BC023087	28808	+	NM_001102663 AK290302 AY894566	45307	+	NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##AL117237|NBPF14|25832|neuroblastoma breakpoint family, member 14##NM_015383|NBPF14|25832|neuroblastoma breakpoint family, member 14##BC094705|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15##AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_173638|NBPF15|284565|neuroblastoma breakpoint family, member 15##BC023087|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15	0.943269	CTCF.p2:8:0.943
chr14	35876245	35876374	reg1006860.p1	12.712	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	-2385	-	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	-114666	+	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	-114738	+	AF260323 NM_032594 BC130377 BC130379 TSC_hg19_v1_chr14_+_36003369 AB037912 AK096639	127000	+	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	401838	-	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	402086	-	BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AF260323|INSM2|84684|insulinoma-associated 2##NM_032594|INSM2|84684|insulinoma-associated 2##BC130377|INSM2|84684|insulinoma-associated 2##BC130379|INSM2|84684|insulinoma-associated 2##AB037912|INSM2|84684|insulinoma-associated 2##AK096639|INSM2|84684|insulinoma-associated 2##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)	0.884861	CTCF.p2:7:0.885
chr16	28289134	28289270	reg1007616.p1	12.711	+	TSC_hg19_v1_chr16_-_28223181 AB002368 NM_015171	-66027	-	AY026388 BC130304 BC144189 TSC_hg19_v1_chr16_-_28222816 AK123846	-66417	-	TSC_hg19_v1_chr16_-_28074776 AY358206 NM_001109763	-214400	-	TSC_hg19_v1_chr16_-_28303389 AK091456 AX746995	14176	-	TSC_hg19_v1_chr16_+_28303845 AY874862 NM_001024401	14579	+	DQ891632 DQ894822 AB527254 BC157849 BC071705 AK000739 AK293264 AY762099 TSC_hg19_v1_chr16_-_28415133 BC000533 BC001571	125839	-	AB002368|XPO6|23214|exportin 6##NM_015171|XPO6|23214|exportin 6##AY026388|XPO6|23214|exportin 6##BC130304|XPO6|23214|exportin 6##BC144189|XPO6|23214|exportin 6##AK123846|XPO6|23214|exportin 6##AY358206|GSG1L|146395|GSG1-like##NM_001109763|GSG1L|146395|GSG1-like##AY874862|SBK1|388228|SH3-binding domain kinase 1##NM_001024401|SBK1|388228|SH3-binding domain kinase 1##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C	0.720484	CTCF.p2:-11:0.720
chr12	122884168	122884295	reg1004521.p1	12.710	+	AF045652 AF045653 AY563000 TSC_hg19_v1_chr12_-_122839059	-45194	-	TSC_hg19_v1_chr12_-_122751044 NM_022916	-133176	-	AB527663 EU176253 TSC_hg19_v1_chr12_-_122750984 AL833244 BC016617 AF439857 AK026840 AK315545	-133233	-	X64838 TSC_hg19_v1_chr12_-_122907155 M97501 NM_001247997 NM_002956 NM_198240	23006	-	TSC_hg19_v1_chr12_-_122985404 BC065918	101196	-	TSC_hg19_v1_chr12_-_122985537 AK027702 AK074638 NM_017612	101287	-	AF045652|CLIP1|6249|CAP-GLY domain containing linker protein 1##AF045653|CLIP1|6249|CAP-GLY domain containing linker protein 1##AY563000|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_022916|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##EU176253|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##BC016617|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##AF439857|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##AK026840|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##AK315545|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##X64838|CLIP1|6249|CAP-GLY domain containing linker protein 1##M97501|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_001247997|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_002956|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_198240|CLIP1|6249|CAP-GLY domain containing linker protein 1##BC065918|ZCCHC8|55596|zinc finger, CCHC domain containing 8##AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8##AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8##NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8	0.023132	
chr11	59521550	59521683	reg1007873.p1	12.709	+	NM_001005324 AB529286	-40299	-	TSC_hg19_v1_chr11_-_59436490 NM_152716	-85109	-	AM392959 AB527197 TSC_hg19_v1_chr11_-_59436483 AL831992 AK127943	-85191	-	AK125660 NM_001178040 NM_004177	915	+	TSC_hg19_v1_chr11_+_59522849 AK293494 BC007405 BC007429	1231	+	TSC_hg19_v1_chr11_+_59522917 AK312909 AK297419 AK290251 U32315 CU675647 HQ447354 AB464272 AJ002076 BT006666	1375	+	NM_001005324|OR10V1|390201|olfactory receptor, family 10, subfamily V, member 1##NM_152716|PATL1|219988|protein associated with topoisomerase II homolog 1 (yeast)##AM392959|PATL1|219988|protein associated with topoisomerase II homolog 1 (yeast)##AL831992|PATL1|219988|protein associated with topoisomerase II homolog 1 (yeast)##AK127943|PATL1|219988|protein associated with topoisomerase II homolog 1 (yeast)##AK125660|STX3|6809|syntaxin 3##NM_001178040|STX3|6809|syntaxin 3##NM_004177|STX3|6809|syntaxin 3##AK293494|STX3|6809|syntaxin 3##BC007405|STX3|6809|syntaxin 3##BC007429|STX3|6809|syntaxin 3##AK312909|STX3|6809|syntaxin 3##AK297419|STX3|6809|syntaxin 3##AK290251|STX3|6809|syntaxin 3##U32315|STX3|6809|syntaxin 3##HQ447354|STX3|6809|syntaxin 3##AJ002076|STX3|6809|syntaxin 3##BT006666|STX3|6809|syntaxin 3	0.999282	CTCF.p2:-8:0.999
chr16	75505801	75505926	reg1006888.p1	12.708	+	TSC_hg19_v1_chr16_-_75498598 BC018082 NM_145254 AK298475 BX647432 BX648429 BX648484 AK311919	-7262	-	AM392693 AM393662 AY302139 CU676164 TSC_hg19_v1_chr16_-_75498577	-7325	-	TSC_hg19_v1_chr16_-_75498315 AK094930	-7566	-	AF280086 NM_021615	23062	-	TSC_hg19_v1_chr16_-_75529279 AF219990	23416	-	TSC_hg19_v1_chr16_-_75529303 AK311527 AK093904	23434	-	BC018082|TMEM170A|124491|transmembrane protein 170A##NM_145254|TMEM170A|124491|transmembrane protein 170A##AK298475|TMEM170A|124491|transmembrane protein 170A##BX647432|TMEM170A|124491|transmembrane protein 170A##BX648429|TMEM170A|124491|transmembrane protein 170A##BX648484|TMEM170A|124491|transmembrane protein 170A##AK311919|TMEM170A|124491|transmembrane protein 170A##AY302139|TMEM170A|124491|transmembrane protein 170A##AK094930|TMEM170A|124491|transmembrane protein 170A##AF280086|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6##NM_021615|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6	0.917385	CTCF.p2:-10:0.917
chr6	34164136	34164269	reg1005641.p1	12.708	+	AB385221 EU432124 HQ258665 HQ258669 U92457 BC130526 BC130528 BC144057 NM_000841 X80818 AK308669	-62800	-	BC112314 BC143981 Y00695 BC069675 NM_001040109 NM_001184698 NM_002418	-392428	-	BC039864 NM_181336 TSC_hg19_v1_chr6_-_33756906	-407292	-	NM_002131 NM_145899 NM_145903 TSC_hg19_v1_chr6_+_34204617	40409	+	TSC_hg19_v1_chr6_+_34204649 AK096863 M23616 M23617 NM_145901 NM_145902 AK301434	40448	+	TSC_hg19_v1_chr6_+_34204678 X14957 X14958 AK308245	40469	+	EU432124|GRM4|2914|glutamate receptor, metabotropic 4##HQ258665|GRM4|2914|glutamate receptor, metabotropic 4##HQ258669|GRM4|2914|glutamate receptor, metabotropic 4##U92457|GRM4|2914|glutamate receptor, metabotropic 4##BC130526|GRM4|2914|glutamate receptor, metabotropic 4##BC130528|GRM4|2914|glutamate receptor, metabotropic 4##BC144057|GRM4|2914|glutamate receptor, metabotropic 4##NM_000841|GRM4|2914|glutamate receptor, metabotropic 4##X80818|GRM4|2914|glutamate receptor, metabotropic 4##BC112314|MLN|4295|motilin##BC143981|MLN|4295|motilin##Y00695|MLN|4295|motilin##BC069675|MLN|4295|motilin##NM_001040109|MLN|4295|motilin##NM_001184698|MLN|4295|motilin##NM_002418|MLN|4295|motilin##BC039864|LEMD2|221496|LEM domain containing 2##NM_181336|LEMD2|221496|LEM domain containing 2##NM_002131|HMGA1|3159|high mobility group AT-hook 1##NM_145899|HMGA1|3159|high mobility group AT-hook 1##NM_145903|HMGA1|3159|high mobility group AT-hook 1##AK096863|HMGA1|3159|high mobility group AT-hook 1##M23616|HMGA1|3159|high mobility group AT-hook 1##M23617|HMGA1|3159|high mobility group AT-hook 1##NM_145901|HMGA1|3159|high mobility group AT-hook 1##NM_145902|HMGA1|3159|high mobility group AT-hook 1##AK301434|HMGA1|3159|high mobility group AT-hook 1##X14957|HMGA1|3159|high mobility group AT-hook 1##X14958|HMGA1|3159|high mobility group AT-hook 1##AK308245|HMGA1|3159|high mobility group AT-hook 1	0.962693	CTCF.p2:-9:0.963
chr16	23814950	23815089	reg1007307.p1	12.706	+	AF146019 NM_022097 AK313062	-49000	+	AK131280 NM_033266	-90199	-	GQ129249 GQ129250 TSC_hg19_v1_chr16_-_23724544 AK309313 AK310834 EF560720 EF560739 AB047079	-90482	-	TSC_hg19_v1_chr16_+_23847303 NM_002738 NM_212535	32275	+	TSC_hg19_v1_chr16_+_23847321 BC036472	32313	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	32376	+	AF146019|CHP2|63928|calcineurin B homologous protein 2##NM_022097|CHP2|63928|calcineurin B homologous protein 2##AK313062|CHP2|63928|calcineurin B homologous protein 2##AK131280|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##NM_033266|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##GQ129249|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##GQ129250|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AK309313|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AK310834|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##EF560720|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##EF560739|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AB047079|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##NM_002738|PRKCB|5579|protein kinase C, beta##NM_212535|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta	0.861523	CTCF.p2:-13:0.862
chr2	173796793	173796882	reg1003939.p1	12.706	+	BC040183 NM_001100397 AK311500 AK311697	-110511	+	TSC_hg19_v1_chr2_+_173600637 AB027471 AK313084 BC024004 AB590290 DQ890549 DQ894011	-196165	+	AB209681 TSC_hg19_v1_chr2_+_173600599 U78516	-196237	+	AB208974 TSC_hg19_v1_chr2_+_173940455	143611	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	143709	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	143811	+	BC040183|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##NM_001100397|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311500|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311697|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB027471|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK313084|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##BC024004|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ890549|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ894011|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB209681|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##U78516|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB208974|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK	0.997395	CTCF.p2:-15:0.997
chr2	46688632	46688769	reg1004919.p1	12.706	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	-163725	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	-164109	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-809626	+	NM_001145051	18003	+	BC034808 NM_080653	58395	-	TSC_hg19_v1_chr2_+_46769874 NM_012249 AK095329	81149	+	U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375##BC034808|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_080653|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_012249|RHOQ|23433|ras homolog gene family, member Q##AK095329|RHOQ|23433|ras homolog gene family, member Q	1.007477	CTCF.p2:4:0.992
chr9	72037224	72037364	reg1007033.p1	12.706	+	AK126127 NM_004816	-93054	+	NM_001127608	-97807	+	NM_001170415 AK302483 AK295034 NM_001170416	-217293	+	TSC_hg19_v1_chr9_-_72287241 AF029106 AF047347 NM_001163	249910	-	TSC_hg19_v1_chr9_-_72374870 AL832683 BC053622 NM_001099666	337602	-	NM_001010940 BC150564 BC136709 BC144373 BC144374 BC144375	398442	+	AK126127|FAM189A2|9413|family with sequence similarity 189, member A2##NM_004816|FAM189A2|9413|family with sequence similarity 189, member A2##NM_001127608|FAM189A2|9413|family with sequence similarity 189, member A2##NM_001170415|TJP2|9414|tight junction protein 2 (zona occludens 2)##AK302483|TJP2|9414|tight junction protein 2 (zona occludens 2)##AK295034|TJP2|9414|tight junction protein 2 (zona occludens 2)##NM_001170416|TJP2|9414|tight junction protein 2 (zona occludens 2)##AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##AL832683|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##BC053622|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##NM_001099666|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##NM_001010940|C9orf135|138255|chromosome 9 open reading frame 135##BC150564|C9orf135|138255|chromosome 9 open reading frame 135##BC136709|C9orf135|138255|chromosome 9 open reading frame 135##BC144373|C9orf135|138255|chromosome 9 open reading frame 135##BC144374|C9orf135|138255|chromosome 9 open reading frame 135##BC144375|C9orf135|138255|chromosome 9 open reading frame 135	0.998772	CTCF.p2:-11:0.999
chr1	16067962	16068080	reg1005632.p1	12.703	+	BC027998 NM_207348	-5213	+	TSC_hg19_v1_chr1_+_16010852 AB020649	-57077	+	TSC_hg19_v1_chr1_+_16010816 BC040441 NM_015164	-57198	+	NM_001013641 BC137239 BC137240 BC127706 BC127707	940	+	TSC_hg19_v1_chr1_+_16083132 BC019895	15121	+	TSC_hg19_v1_chr1_+_16085245 NM_017556	17256	+	BC027998|SLC25A34|284723|solute carrier family 25, member 34##NM_207348|SLC25A34|284723|solute carrier family 25, member 34##AB020649|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2##BC040441|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2##NM_015164|PLEKHM2|23207|pleckstrin homology domain containing, family M (with RUN domain) member 2##NM_001013641|TMEM82|388595|transmembrane protein 82##BC137239|TMEM82|388595|transmembrane protein 82##BC137240|TMEM82|388595|transmembrane protein 82##BC127706|TMEM82|388595|transmembrane protein 82##BC127707|TMEM82|388595|transmembrane protein 82##BC019895|FBLIM1|54751|filamin binding LIM protein 1##NM_017556|FBLIM1|54751|filamin binding LIM protein 1	0.983426	CTCF.p2:15:0.983
chr14	60651155	60651287	reg1005417.p2	12.703	+	TSC_hg19_v1_chr14_-_60632103 BC007337 AF151844 AK313285 AL117420 NM_016029	-19087	-	AY359031 TSC_hg19_v1_chr14_-_60632031 BC000637	-19189	-	NM_022495 TSC_hg19_v1_chr14_+_60558640 AK095489	-92394	+	AK097843 NM_177952 AK313337	61250	+	TSC_hg19_v1_chr14_+_60715965 NM_021003 NM_177951	64737	+	TSC_hg19_v1_chr14_+_60715993 S87759 BC026691 AF070670 BC063243 AK308225	64890	+	BC007337|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AF151844|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AK313285|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AL117420|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_016029|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AY359031|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC000637|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_022495|C14orf135|64430|chromosome 14 open reading frame 135##AK095489|C14orf135|64430|chromosome 14 open reading frame 135##AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_021003|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_177951|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##S87759|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC026691|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AF070670|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC063243|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AK308225|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	0.977906	CTCF.p2:25:0.978
chr15	78162910	78163018	reg1006404.p1	12.703	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-238184	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-238265	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-449702	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	206989	-	NM_001101404	221962	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	260798	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.043862	
chr12	54833538	54833657	reg1005884.p1	12.702	+	TSC_hg19_v1_chr12_-_54813025 BC008786 AK312414 NM_002205	-20562	-	TSC_hg19_v1_chr12_-_54813005 AK304696 X06256	-20593	-	M13918 TSC_hg19_v1_chr12_-_54813000 CU679109 DQ892690 EU176722 AB385038 AK291570 AK311051	-20629	-	BC021179 TSC_hg19_v1_chr12_-_54867359	33755	-	TSC_hg19_v1_chr12_-_54867387 BC105587 AK098819 NM_144594	33787	-	TSC_hg19_v1_chr12_+_54891516 NM_005337	57908	+	BC008786|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK312414|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##NM_002205|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK304696|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##X06256|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##M13918|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##DQ892690|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##EU176722|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK291570|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK311051|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##BC021179|GTSF1|121355|gametocyte specific factor 1##BC105587|GTSF1|121355|gametocyte specific factor 1##AK098819|GTSF1|121355|gametocyte specific factor 1##NM_144594|GTSF1|121355|gametocyte specific factor 1##NM_005337|NCKAP1L|3071|NCK-associated protein 1-like	0.949541	CTCF.p2:9:0.950
chr15	39978364	39978478	reg1004797.p1	12.702	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	-105092	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	-435496	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-989623	+	AK093308 AX748045 BC045191 NM_152597	96607	-	AK091251 TSC_hg19_v1_chr15_+_40075106	96685	+	CU688250 TSC_hg19_v1_chr15_-_40212342	233864	-	AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.997103	CTCF.p2:3:0.997
chr15	73969553	73969671	reg1005152.p1	12.701	+	TSC_hg19_v1_chr15_-_73925720 BC105979 AK129908 AF109126 AF109127 AB209812 BC067828 NM_001161363 NM_001161364 NM_012428 NM_017455	-43886	-	HQ258139 TSC_hg19_v1_chr15_-_73925588 BC117462 BC143880 BC143881 AK313441 AK314248 BC030773 CR936779 AK304478 AK297184	-44026	-	NM_001042367 AK131030 BC055412	-234103	+	TSC_hg19_v1_chr15_+_73976549 AJ583696	6936	+	BC062581 NM_001024736 NM_025240 TSC_hg19_v1_chr15_+_73976629	7022	+	TSC_hg19_v1_chr15_+_73976696 AY358343	7085	+	BC105979|NPTN|27020|neuroplastin##AK129908|NPTN|27020|neuroplastin##AF109126|NPTN|27020|neuroplastin##AF109127|NPTN|27020|neuroplastin##AB209812|NPTN|27020|neuroplastin##BC067828|NPTN|27020|neuroplastin##NM_001161363|NPTN|27020|neuroplastin##NM_001161364|NPTN|27020|neuroplastin##NM_012428|NPTN|27020|neuroplastin##NM_017455|NPTN|27020|neuroplastin##HQ258139|NPTN|27020|neuroplastin##BC117462|NPTN|27020|neuroplastin##BC143880|NPTN|27020|neuroplastin##BC143881|NPTN|27020|neuroplastin##AK313441|NPTN|27020|neuroplastin##AK314248|NPTN|27020|neuroplastin##BC030773|NPTN|27020|neuroplastin##CR936779|NPTN|27020|neuroplastin##AK304478|NPTN|27020|neuroplastin##AK297184|NPTN|27020|neuroplastin##NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60##AK131030|C15orf60|283677|chromosome 15 open reading frame 60##BC055412|C15orf60|283677|chromosome 15 open reading frame 60##BC062581|CD276|80381|CD276 molecule##NM_001024736|CD276|80381|CD276 molecule##NM_025240|CD276|80381|CD276 molecule##AY358343|CD276|80381|CD276 molecule	0.246871	CTCF.p2:0:0.247
chr5	903308	903427	reg1004963.p1	12.701	+	TSC_hg19_v1_chr5_+_892974 NM_001166260 NM_004237 AK310376 BC000404 BC019294 U96131 AB527502 EU446745 CU674196 CR456744 L40384	-10335	+	TSC_hg19_v1_chr5_-_892920 AK299157 NM_023924	-10433	-	AK023503 TSC_hg19_v1_chr5_-_892917	-10452	-	TSC_hg19_v1_chr5_-_997422 AK126199 NM_001242737	94068	-	TSC_hg19_v1_chr5_+_1008916 BC012176 AF358137 AB062887 NM_033120	105666	+	CU675797 AF105365 TSC_hg19_v1_chr5_-_1112151 AK302856 BC098390 BC007760 BC018982 NM_006598	208790	-	NM_001166260|TRIP13|9319|thyroid hormone receptor interactor 13##NM_004237|TRIP13|9319|thyroid hormone receptor interactor 13##AK310376|TRIP13|9319|thyroid hormone receptor interactor 13##BC000404|TRIP13|9319|thyroid hormone receptor interactor 13##BC019294|TRIP13|9319|thyroid hormone receptor interactor 13##U96131|TRIP13|9319|thyroid hormone receptor interactor 13##EU446745|TRIP13|9319|thyroid hormone receptor interactor 13##CR456744|TRIP13|9319|thyroid hormone receptor interactor 13##L40384|TRIP13|9319|thyroid hormone receptor interactor 13##AK299157|BRD9|65980|bromodomain containing 9##NM_023924|BRD9|65980|bromodomain containing 9##AK023503|BRD9|65980|bromodomain containing 9##AK126199|LOC100506688|100506688|uncharacterized LOC100506688##NM_001242737|LOC100506688|100506688|uncharacterized LOC100506688##BC012176|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF358137|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AB062887|NKD2|85409|naked cuticle homolog 2 (Drosophila)##NM_033120|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF105365|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK302856|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC098390|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC007760|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC018982|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##NM_006598|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7	0.830069	CTCF.p2:25:0.830
chr1	158094888	158095014	reg1006443.p1	12.700	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	-131563	+	AY302131 NM_018240	-131889	+	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	-283389	-	BC027926 NM_001766	54785	+	AK225996 TSC_hg19_v1_chr1_+_158150684 AK310541 J04142 AK310749 AB590619 CU693322	55833	+	M28825 NM_001763	128975	+	BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##AY302131|KIRREL|55243|kin of IRRE like (Drosophila)##NM_018240|KIRREL|55243|kin of IRRE like (Drosophila)##DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule##AK225996|CD1D|912|CD1d molecule##J04142|CD1D|912|CD1d molecule##AK310749|CD1D|912|CD1d molecule##M28825|CD1A|909|CD1a molecule##NM_001763|CD1A|909|CD1a molecule	0.991283	CTCF.p2:0:0.991
chr1	39564453	39564590	reg1007415.p1	12.700	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-17433	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	-72513	+	TSC_hg19_v1_chr1_+_39456956 NM_001136275 NM_024595 AK022728 AK092624 AX747634 AK124799 AK126262 AK223276 AK298890 AK303098 BC001498 BC119745 BC119746 AY326465	-107459	+	NM_015038	310654	+	TSC_hg19_v1_chr1_+_39922264 AK023821	357798	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	392824	+	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_001136275|AKIRIN1|79647|akirin 1##NM_024595|AKIRIN1|79647|akirin 1##AK022728|AKIRIN1|79647|akirin 1##AK092624|AKIRIN1|79647|akirin 1##AK124799|AKIRIN1|79647|akirin 1##AK126262|AKIRIN1|79647|akirin 1##AK223276|AKIRIN1|79647|akirin 1##AK298890|AKIRIN1|79647|akirin 1##AK303098|AKIRIN1|79647|akirin 1##BC001498|AKIRIN1|79647|akirin 1##BC119745|AKIRIN1|79647|akirin 1##BC119746|AKIRIN1|79647|akirin 1##AY326465|AKIRIN1|79647|akirin 1##NM_015038|KIAA0754|643314|KIAA0754##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a	0.988863	CTCF.p2:-18:0.989
chr7	55323347	55323467	reg1003987.p3	12.700	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-236461	+	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	-236662	+	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	-496486	-	AK095857 NM_018697	109733	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	110165	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	316633	-	AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor##AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	0.811239	CTCF.p2:3:0.811
chr18	6482668	6482791	reg1004874.p2	12.699	+	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	-67814	-	NM_001080209	-590627	-	TSC_hg19_v1_chr18_-_5630663 BC008377	-852082	-	NM_001243517	28685	+	NM_001010000 BX648684 AK308259 AK302026	351736	+	BC144590 NM_005559 X58531	635055	-	BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001080209|TMEM200C|645369|transmembrane protein 200C##BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28##BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1	0.978607	CTCF.p2:18:0.979
chr2	149267112	149267246	reg1006505.p1	12.699	+	NM_181742	-488007	-	TSC_hg19_v1_chr2_+_148778636 NM_018328 EF542797	-488570	+	TSC_hg19_v1_chr2_-_148778310 AK225092 BC005388 AF022108 AF047598 AF132596 BC014847 AK295721 AK291989 AK294878 AK298862 NM_001190882 NM_001190879 AK299749 NM_002552 NM_001190881 NM_181741	-488817	-	TSC_hg19_v1_chr2_+_149402332 AK125789	135157	+	NM_015630 AF286904 BC093818 BC093820	135424	+	TSC_hg19_v1_chr2_+_149632795 NM_004522 BC002721 BC025961 AB011103	365617	+	NM_181742|ORC4|5000|origin recognition complex, subunit 4##NM_018328|MBD5|55777|methyl-CpG binding domain protein 5##EF542797|MBD5|55777|methyl-CpG binding domain protein 5##AK225092|ORC4|5000|origin recognition complex, subunit 4##BC005388|ORC4|5000|origin recognition complex, subunit 4##AF022108|ORC4|5000|origin recognition complex, subunit 4##AF047598|ORC4|5000|origin recognition complex, subunit 4##AF132596|ORC4|5000|origin recognition complex, subunit 4##BC014847|ORC4|5000|origin recognition complex, subunit 4##AK295721|ORC4|5000|origin recognition complex, subunit 4##AK291989|ORC4|5000|origin recognition complex, subunit 4##AK294878|ORC4|5000|origin recognition complex, subunit 4##AK298862|ORC4|5000|origin recognition complex, subunit 4##NM_001190882|ORC4|5000|origin recognition complex, subunit 4##NM_001190879|ORC4|5000|origin recognition complex, subunit 4##AK299749|ORC4|5000|origin recognition complex, subunit 4##NM_002552|ORC4|5000|origin recognition complex, subunit 4##NM_001190881|ORC4|5000|origin recognition complex, subunit 4##NM_181741|ORC4|5000|origin recognition complex, subunit 4##AK125789|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##NM_015630|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##AF286904|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##BC093818|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##BC093820|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##NM_004522|KIF5C|3800|kinesin family member 5C##BC002721|KIF5C|3800|kinesin family member 5C##BC025961|KIF5C|3800|kinesin family member 5C##AB011103|KIF5C|3800|kinesin family member 5C	0.115793	
chr5	150226742	150226888	reg1005553.p2	12.699	+	EU742619 NM_001145805	-731	+	TSC_hg19_v1_chr5_+_150158318 AK027847 BC082259 AF313413 BC009719	-68461	+	AK125286 NM_032947	-69308	+	BC117248 BC032607 DQ908918 TSC_hg19_v1_chr5_-_150284372	57518	-	AF395541 TSC_hg19_v1_chr5_-_150284395	57583	-	TSC_hg19_v1_chr5_-_150284430 AK300528	57631	-	EU742619|IRGM|345611|immunity-related GTPase family, M##NM_001145805|IRGM|345611|immunity-related GTPase family, M##AK027847|C5orf62|85027|chromosome 5 open reading frame 62##AF313413|C5orf62|85027|chromosome 5 open reading frame 62##BC009719|C5orf62|85027|chromosome 5 open reading frame 62##AK125286|C5orf62|85027|chromosome 5 open reading frame 62##NM_032947|C5orf62|85027|chromosome 5 open reading frame 62##BC117248|ZNF300|91975|zinc finger protein 300##BC032607|ZNF300|91975|zinc finger protein 300##DQ908918|ZNF300|91975|zinc finger protein 300##AF395541|ZNF300|91975|zinc finger protein 300##AK300528|ZNF300|91975|zinc finger protein 300	0.080326	
chr8	139780000	139780117	reg1005726.p1	12.699	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-270952	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-3309857	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-3310400	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	146186	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	935224	-	AB067469 TSC_hg19_v1_chr8_-_141467841	1687767	-	AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9	0.991761	CTCF.p2:-25:0.992
chrX	9842122	9842251	reg1006866.p1	12.698	+	BC140866 TSC_hg19_v1_chrX_+_9754543	-87643	+	TSC_hg19_v1_chrX_+_9754468 NM_001649 X83543	-87706	+	Z48804 BC015657 BC068977 NM_000273	-108226	-	NM_001195081	93211	+	BC098455 NM_015691	141607	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	282868	+	BC140866|SHROOM2|357|shroom family member 2##NM_001649|SHROOM2|357|shroom family member 2##X83543|SHROOM2|357|shroom family member 2##Z48804|GPR143|4935|G protein-coupled receptor 143##BC015657|GPR143|4935|G protein-coupled receptor 143##BC068977|GPR143|4935|G protein-coupled receptor 143##NM_000273|GPR143|4935|G protein-coupled receptor 143##NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4	0.877627	CTCF.p2:-10:0.878
chr19	18460478	18460612	reg1006692.p1	12.697	+	TSC_hg19_v1_chr19_+_18451449 AK289968 NM_017712 AK294497 BC042138 BC028063 AJ278828 AK000215	-9138	+	TSC_hg19_v1_chr19_-_18433953 AF117235 NM_001252129 NM_012321	-26579	-	TSC_hg19_v1_chr19_-_18433887 AJ238096 AF251218 BC023665 AF182290 BC003652 BC022198 BC000387	-26658	-	TSC_hg19_v1_chr19_+_18496967 AB000584 AK225425 AK225431 AK291530 NM_004864 BC008962 U88323 BC000529 AF019770 U51731 BT019465	36437	+	BC025744 TSC_hg19_v1_chr19_-_18508433 NM_145256 BC053659 BC033825	47875	-	TSC_hg19_v1_chr19_+_18530163 NM_001009998 NM_032627	69582	+	AK289968|PGPEP1|54858|pyroglutamyl-peptidase I##NM_017712|PGPEP1|54858|pyroglutamyl-peptidase I##AK294497|PGPEP1|54858|pyroglutamyl-peptidase I##BC042138|PGPEP1|54858|pyroglutamyl-peptidase I##BC028063|PGPEP1|54858|pyroglutamyl-peptidase I##AJ278828|PGPEP1|54858|pyroglutamyl-peptidase I##AK000215|PGPEP1|54858|pyroglutamyl-peptidase I##AF117235|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001252129|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012321|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238096|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF251218|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC023665|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182290|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC003652|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC022198|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC000387|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AB000584|GDF15|9518|growth differentiation factor 15##AK225431|GDF15|9518|growth differentiation factor 15##AK291530|GDF15|9518|growth differentiation factor 15##NM_004864|GDF15|9518|growth differentiation factor 15##BC008962|GDF15|9518|growth differentiation factor 15##U88323|GDF15|9518|growth differentiation factor 15##BC000529|GDF15|9518|growth differentiation factor 15##AF019770|GDF15|9518|growth differentiation factor 15##U51731|GDF15|9518|growth differentiation factor 15##BT019465|GDF15|9518|growth differentiation factor 15##BC025744|LRRC25|126364|leucine rich repeat containing 25##NM_145256|LRRC25|126364|leucine rich repeat containing 25##BC053659|LRRC25|126364|leucine rich repeat containing 25##BC033825|LRRC25|126364|leucine rich repeat containing 25##NM_001009998|SSBP4|170463|single stranded DNA binding protein 4##NM_032627|SSBP4|170463|single stranded DNA binding protein 4	0.988974	CTCF.p2:-11:0.989
chr19	8764124	8764223	reg1003738.p1	12.694	+	TSC_hg19_v1_chr19_-_8675585 AB209515 NM_030957	-88581	-	TSC_hg19_v1_chr19_-_8642338 AB290178	-121775	-	TSC_hg19_v1_chr19_-_8642317 AK301166 AK310058 AB210037 AK131106 NM_012335	-121851	-	AY248901 AK292258 BC024028 TSC_hg19_v1_chr19_-_8809146 BC045752 NM_178525	44939	-	BC137046 BC151149 NM_001004699	77179	+	AK055494 NM_144693	169391	-	AB209515|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##NM_030957|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##AB290178|MYO1F|4542|myosin IF##AK301166|MYO1F|4542|myosin IF##AB210037|MYO1F|4542|myosin IF##AK131106|MYO1F|4542|myosin IF##NM_012335|MYO1F|4542|myosin IF##AY248901|ACTL9|284382|actin-like 9##AK292258|ACTL9|284382|actin-like 9##BC024028|ACTL9|284382|actin-like 9##BC045752|ACTL9|284382|actin-like 9##NM_178525|ACTL9|284382|actin-like 9##BC137046|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##BC151149|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##NM_001004699|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##AK055494|ZNF558|148156|zinc finger protein 558##NM_144693|ZNF558|148156|zinc finger protein 558	0.858438	CTCF.p2:1:0.858
chr6	133089203	133089334	reg1004420.p1	12.694	+	AK292125 NM_078488 TSC_hg19_v1_chr6_-_133084603	-4673	-	BC064641 AB435062 AB435063 AB435064 AB435065 NM_001242350 HQ258282 HQ258449 AB026705 AJ132100 D89974 NM_004665 AK290908 AK298719 BC126145 BC126147 BC144064	-10267	-	U39664 BC096268 AJ132099 BC096265 BC096266 BC096267 TSC_hg19_v1_chr6_-_133035195 AK290425 AK314265 NM_004666	-54080	-	AK124442 BC069570 AK293853 TSC_hg19_v1_chr6_-_133119740 NM_052831 AK289918	30433	-	TSC_hg19_v1_chr6_+_133135707 AK096147 NM_001016 D28378 X53505	46439	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	46451	+	AK292125|VNN2|8875|vanin 2##NM_078488|VNN2|8875|vanin 2##BC064641|VNN2|8875|vanin 2##AB435062|VNN2|8875|vanin 2##AB435063|VNN2|8875|vanin 2##AB435064|VNN2|8875|vanin 2##AB435065|VNN2|8875|vanin 2##NM_001242350|VNN2|8875|vanin 2##HQ258282|VNN2|8875|vanin 2##HQ258449|VNN2|8875|vanin 2##AB026705|VNN2|8875|vanin 2##AJ132100|VNN2|8875|vanin 2##D89974|VNN2|8875|vanin 2##NM_004665|VNN2|8875|vanin 2##AK290908|VNN2|8875|vanin 2##AK298719|VNN2|8875|vanin 2##BC126145|VNN2|8875|vanin 2##BC126147|VNN2|8875|vanin 2##BC144064|VNN2|8875|vanin 2##U39664|VNN1|8876|vanin 1##BC096268|VNN1|8876|vanin 1##AJ132099|VNN1|8876|vanin 1##BC096265|VNN1|8876|vanin 1##BC096266|VNN1|8876|vanin 1##BC096267|VNN1|8876|vanin 1##AK290425|VNN1|8876|vanin 1##AK314265|VNN1|8876|vanin 1##NM_004666|VNN1|8876|vanin 1##AK124442|C6orf192|116843|chromosome 6 open reading frame 192##BC069570|C6orf192|116843|chromosome 6 open reading frame 192##AK293853|C6orf192|116843|chromosome 6 open reading frame 192##NM_052831|C6orf192|116843|chromosome 6 open reading frame 192##AK289918|C6orf192|116843|chromosome 6 open reading frame 192##AK096147|SNORA33|594839|small nucleolar RNA, H/ACA box 33##NM_001016|RPS12|6206|ribosomal protein S12##D28378|RPS12|6206|ribosomal protein S12##X53505|RPS12|6206|ribosomal protein S12##AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12	0.022511	
chr11	38813031	38813144	reg1004572.p1	12.693	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-2193285	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-2196983	+	NM_000448 M29474	-2223519	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	1501507	-	AB046800 NM_020929	1502576	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	4520431	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.985867	CTCF.p2:13:0.986
chr1	192475935	192476056	reg1005102.p1	12.693	+	AY643711 NM_001039152	-189874	+	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	-348392	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	-2029260	-	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	68913	+	NM_002927 NM_144766 AF030107 BC016667	129289	+	BC042755 BC044742 NM_002923 TSC_hg19_v1_chr1_+_192778168 AK313668 BC007049 L13463 AY971351 AB528517 AF493926 BT007065 CR457410 CU675517 DQ893178 DQ896478	302189	+	AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1##NM_002927|RGS13|6003|regulator of G-protein signaling 13##NM_144766|RGS13|6003|regulator of G-protein signaling 13##AF030107|RGS13|6003|regulator of G-protein signaling 13##BC016667|RGS13|6003|regulator of G-protein signaling 13##BC042755|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC044742|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002923|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AK313668|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC007049|RGS2|5997|regulator of G-protein signaling 2, 24kDa##L13463|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AY971351|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AF493926|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT007065|RGS2|5997|regulator of G-protein signaling 2, 24kDa##CR457410|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ893178|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ896478|RGS2|5997|regulator of G-protein signaling 2, 24kDa	0.0	
chr3	4675204	4675318	reg1004640.p2	12.693	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-140065	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-140133	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-140230	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	345855	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	345920	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	346093	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.94906	CTCF.p2:5:0.949
chr5	102568246	102568366	reg1005955.p1	12.693	+	BC024591 NM_015216 AB463068	-103032	+	TSC_hg19_v1_chr5_+_102456089 AK294787	-112248	+	AK310544 AB007893 TSC_hg19_v1_chr5_+_102456004	-112325	+	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	26151	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	330175	-	AK308672 NM_001962 U26403	4438284	-	BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK294787|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AB007893|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5	0.234093	CTCF.p2:-9:0.234
chr19	6736625	6736774	reg1005108.p1	12.692	+	TSC_hg19_v1_chr19_-_6720662 BC063852 BC150179 BC150200 K02765 AK304071 BC150299 NM_000064 AK299114	-16043	-	AF064090 NM_003807 NM_172014	-66101	-	TSC_hg19_v1_chr19_-_6670094 CR541854 CR541871 AB528780 AF036581 AY028261 AY358812 BC018058 AK292037	-66575	-	AL365404 TSC_hg19_v1_chr19_-_6737583	876	-	TSC_hg19_v1_chr19_-_6737592 AK291968	896	-	TSC_hg19_v1_chr19_-_6737615 BC146909 AX775899 NM_001080452	919	-	BC063852|C3|718|complement component 3##BC150179|C3|718|complement component 3##BC150200|C3|718|complement component 3##K02765|C3|718|complement component 3##AK304071|C3|718|complement component 3##BC150299|C3|718|complement component 3##NM_000064|C3|718|complement component 3##AF064090|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_003807|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_172014|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541854|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541871|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF036581|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY028261|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY358812|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC018058|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AK292037|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AL365404|GPR108|56927|G protein-coupled receptor 108##AK291968|GPR108|56927|G protein-coupled receptor 108##BC146909|GPR108|56927|G protein-coupled receptor 108##AX775899|GPR108|56927|G protein-coupled receptor 108##NM_001080452|GPR108|56927|G protein-coupled receptor 108	0.210588	
chr4	42570775	42570893	reg1005179.p1	12.692	+	NM_001080505	-170979	+	AB126828 AB126829 NM_001159547 NM_207406	-415940	-	TSC_hg19_v1_chr4_-_42154719 AK125953 AB463533	-416178	-	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	88254	-	AB528853 NM_001080476	324447	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	1879719	-	NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##AK125953|BEND4|389206|BEN domain containing 4##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8	0.551246	CTCF.p2:-3:0.551
chr20	48786008	48786137	reg1007072.p1	12.691	+	TSC_hg19_v1_chr20_-_48770302 BC144612 NM_001162505 NM_199129 NM_199203	-15754	-	TSC_hg19_v1_chr20_-_48770261 AK023028 AF155120	-15796	-	TSC_hg19_v1_chr20_-_48770251 AB044550 BC018893 BC142966	-15833	-	NM_005194 TSC_hg19_v1_chr20_+_48807197	21121	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	21309	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	21558	+	BC144612|TMEM189|387521|transmembrane protein 189##NM_001162505|TMEM189|387521|transmembrane protein 189##NM_199129|TMEM189|387521|transmembrane protein 189##NM_199203|TMEM189-UBE2V1|387522|TMEM189-UBE2V1 readthrough##AK023028|TMEM189|387521|transmembrane protein 189##AF155120|TMEM189|387521|transmembrane protein 189##AB044550|TMEM189|387521|transmembrane protein 189##BC018893|TMEM189|387521|transmembrane protein 189##BC142966|TMEM189|387521|transmembrane protein 189##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta	0.979691	CTCF.p2:-2:0.980
chr8	40110734	40110863	reg1007266.p1	12.691	+	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	-99780	+	AK128691 NM_194294	-318325	+	NM_002164 AK313259 BC027882 X17668 AY221100 CU693308 JF772862	-339414	+	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	644539	-	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	1056232	-	TSC_hg19_v1_chr8_+_41348077 NM_001174124 NM_016099	1237275	+	BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1##AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1##X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1##AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1##JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1##NM_001174124|GOLGA7|51125|golgin A7##NM_016099|GOLGA7|51125|golgin A7	0.980321	CTCF.p2:-11:0.980
chr19	45629413	45629542	reg1005677.p1	12.690	+	TSC_hg19_v1_chr19_+_45596436 NM_019121	-33055	+	TSC_hg19_v1_chr19_+_45596205 BC035704	-33262	+	TSC_hg19_v1_chr19_+_45582529 NM_001007270 NM_001007269 NM_024707 AK024018 BC007793	-46964	+	NM_198478	33930	-	TSC_hg19_v1_chr19_-_45681496 FJ418644 BC001907 NM_024108 BC004450 AF161407	52001	-	NM_212550 AK296695 TSC_hg19_v1_chr19_+_45682022	52536	+	NM_019121|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##BC035704|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##NM_001007270|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_001007269|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_024707|GEMIN7|79760|gem (nuclear organelle) associated protein 7##AK024018|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC007793|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_198478|NKPD1|284353|NTPase, KAP family P-loop domain containing 1##FJ418644|TRAPPC6A|79090|trafficking protein particle complex 6A##BC001907|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_024108|TRAPPC6A|79090|trafficking protein particle complex 6A##BC004450|TRAPPC6A|79090|trafficking protein particle complex 6A##AF161407|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_212550|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3##AK296695|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3	0.989319	CTCF.p2:9:0.989
chr7	90084880	90084996	reg1004407.p1	12.690	+	TSC_hg19_v1_chr7_+_90032774 AL136770 BC016061	-52134	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	-52234	+	TSC_hg19_v1_chr7_+_89976015 AF351613 NM_001042717 NM_033107 AK095561 BC107714 CR933597 AK294325 BC144162	-108934	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	140871	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	253845	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	254222	+	AL136770|CLDN12|9069|claudin 12##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12##AF351613|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001042717|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_033107|GTPBP10|85865|GTP-binding protein 10 (putative)##AK095561|GTPBP10|85865|GTP-binding protein 10 (putative)##BC107714|GTPBP10|85865|GTP-binding protein 10 (putative)##CR933597|GTPBP10|85865|GTP-binding protein 10 (putative)##AK294325|GTPBP10|85865|GTP-binding protein 10 (putative)##BC144162|GTPBP10|85865|GTP-binding protein 10 (putative)##AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14	0.862789	CTCF.p2:-4:0.863
chr9	74421866	74421995	reg1007074.p1	12.690	+	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	-38352	-	AL136545 TSC_hg19_v1_chr9_-_74061901	-360047	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	-685394	-	AF151825 TSC_hg19_v1_chr9_-_74525994	103995	-	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	104226	-	TSC_hg19_v1_chr9_+_74526393 NM_182505 BC010179	104471	+	BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2##AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF151825|FAM108B1|51104|family with sequence similarity 108, member B1##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1##NM_182505|C9orf85|138241|chromosome 9 open reading frame 85##BC010179|C9orf85|138241|chromosome 9 open reading frame 85	0.999848	CTCF.p2:-6:1.000
chr19	13373317	13373439	reg1005338.p2	12.689	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-109198	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-112086	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-112239	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	243798	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	469201	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	485341	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.999079	CTCF.p2:9:0.999
chr6	129919532	129919643	reg1005118.p1	12.689	+	NM_000426 NM_001079823 Z26653	-715274	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-1077931	-	AK124031 NM_001164687	-1679829	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	111739	-	NM_001010876	262828	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	420138	+	NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	0.773042	CTCF.p2:-9:0.773
chr3	129874462	129874582	reg1007023.p1	12.688	+	TSC_hg19_v1_chr3_-_129830331 BC071676	-44173	-	TSC_hg19_v1_chr3_-_129830276 BC083497	-44227	-	NM_001136152 BC127755	-73784	+	EU085556 NM_153264 AM906078	189896	+	AM774225 NM_001102608	404655	+	BC127105 BC127106 TSC_hg19_v1_chr3_-_130465651 AK314219 BC110318 BC009899 BC017332 BC057239 NM_014602	591081	-	NM_001136152|ALG1L2|644974|asparagine-linked glycosylation 1-like 2##EU085556|COL6A5|256076|collagen, type VI, alpha 5##NM_153264|COL6A5|256076|collagen, type VI, alpha 5##AM906078|COL6A5|256076|collagen, type VI, alpha 5##AM774225|COL6A6|131873|collagen, type VI, alpha 6##NM_001102608|COL6A6|131873|collagen, type VI, alpha 6##BC127105|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC127106|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AK314219|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC110318|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC009899|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC017332|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC057239|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_014602|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4	0.991264	CTCF.p2:-17:0.991
chr5	134887662	134887770	reg1005422.p1	12.688	+	BC008687 BC028226 NM_006161 TSC_hg19_v1_chr5_-_134871655 AB593107 AK314280	-16070	-	AK131088 AB161513 NM_001099221	-99679	-	CU686932 BC074831 BC074832 BC069608 BC069610 BC117156 BC117158 AB074498 NM_130848	-104799	-	AF086340 AF073957 AF144103 BT007080 AB528117 AM392840 AF106911 BC003513 AY358906 TSC_hg19_v1_chr5_-_134914682 AB543622 AK075514	26857	-	NM_004887	27252	-	AK126812 NM_145282 BC025747	282673	+	BC008687|NEUROG1|4762|neurogenin 1##BC028226|NEUROG1|4762|neurogenin 1##NM_006161|NEUROG1|4762|neurogenin 1##AB593107|NEUROG1|4762|neurogenin 1##AB161513|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##NM_001099221|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##BC074831|C5orf20|140947|chromosome 5 open reading frame 20##BC074832|C5orf20|140947|chromosome 5 open reading frame 20##BC069608|C5orf20|140947|chromosome 5 open reading frame 20##BC069610|C5orf20|140947|chromosome 5 open reading frame 20##BC117156|C5orf20|140947|chromosome 5 open reading frame 20##BC117158|C5orf20|140947|chromosome 5 open reading frame 20##AB074498|C5orf20|140947|chromosome 5 open reading frame 20##NM_130848|C5orf20|140947|chromosome 5 open reading frame 20##AF086340|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF073957|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF144103|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BT007080|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AM392840|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF106911|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BC003513|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AY358906|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AB543622|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AK075514|CXCL14|9547|chemokine (C-X-C motif) ligand 14##NM_004887|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AK126812|SLC25A48|153328|solute carrier family 25, member 48##NM_145282|SLC25A48|153328|solute carrier family 25, member 48##BC025747|SLC25A48|153328|solute carrier family 25, member 48	0.511208	CTCF.p2:5:0.511
chr1	19717937	19718074	reg1006820.p1	12.687	+	NM_001040125 NM_001040126 NM_017765 TSC_hg19_v1_chr1_+_19638819 AK000327 AK130175 AK125580 AK130171 AK172745 BC015324	-79210	+	BC007352 BC012171 TSC_hg19_v1_chr1_-_19638614 BC010852 NM_003689	-79371	-	TSC_hg19_v1_chr1_-_19638598 Y16675 AF026947 AK225267	-79400	-	TSC_hg19_v1_chr1_-_19811972 AK313113 BC107752	93962	-	TSC_hg19_v1_chr1_-_19812006 AK125085	94001	-	NM_001206540 NM_004930 TSC_hg19_v1_chr1_-_19812073	94084	-	NM_001040125|PQLC2|54896|PQ loop repeat containing 2##NM_001040126|PQLC2|54896|PQ loop repeat containing 2##NM_017765|PQLC2|54896|PQ loop repeat containing 2##AK000327|PQLC2|54896|PQ loop repeat containing 2##AK130175|PQLC2|54896|PQ loop repeat containing 2##AK125580|PQLC2|54896|PQ loop repeat containing 2##AK130171|PQLC2|54896|PQ loop repeat containing 2##AK172745|PQLC2|54896|PQ loop repeat containing 2##BC015324|PQLC2|54896|PQ loop repeat containing 2##BC007352|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC012171|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC010852|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##NM_003689|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##Y16675|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AF026947|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AK225267|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AK313113|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##BC107752|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##AK125085|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_001206540|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_004930|CAPZB|832|capping protein (actin filament) muscle Z-line, beta	0.971033	CTCF.p2:2:0.971
chr2	109224320	109224442	reg1005195.p1	12.687	+	TSC_hg19_v1_chr2_+_109223602 AF527762 NM_001193482	-764	+	TSC_hg19_v1_chr2_+_109204921 BC005341 NM_001193488	-19412	+	TSC_hg19_v1_chr2_+_109204792 AF527763	-19596	+	TSC_hg19_v1_chr2_+_109237706 AK304260 NM_001193484 AF527760 AK310547	13322	+	AF527759 NM_001193485	46886	+	TSC_hg19_v1_chr2_+_109271492 AK302411 AK312178	47107	+	AF527762|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193482|LIMS1|3987|LIM and senescent cell antigen-like domains 1##BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK304260|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193484|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527760|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK310547|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3	0.352583	CTCF.p2:-5:0.353
chr10	101006616	101006744	reg1006728.p1	12.686	+	AJ299720 AK094037 BC112356 AF282885 AF282886 AF282887 AJ299719 AK314759 NM_001166244 NM_001166245 NM_001166246 NM_021828	-11086	-	TSC_hg19_v1_chr10_-_100206705 NM_000195 NM_182639	-799969	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	-800005	-	TSC_hg19_v1_chr10_+_101088794 NM_020348	82144	+	TSC_hg19_v1_chr10_+_101089114 AK308618	82446	+	AK301916 AB587385 AY513279 M37400 AF052153 BC000498 AK312684 TSC_hg19_v1_chr10_-_101190382 AK293483 AK309174 NM_002079	183686	-	AJ299720|HPSE2|60495|heparanase 2##AK094037|HPSE2|60495|heparanase 2##BC112356|HPSE2|60495|heparanase 2##AF282885|HPSE2|60495|heparanase 2##AF282886|HPSE2|60495|heparanase 2##AF282887|HPSE2|60495|heparanase 2##AJ299719|HPSE2|60495|heparanase 2##AK314759|HPSE2|60495|heparanase 2##NM_001166244|HPSE2|60495|heparanase 2##NM_001166245|HPSE2|60495|heparanase 2##NM_001166246|HPSE2|60495|heparanase 2##NM_021828|HPSE2|60495|heparanase 2##NM_000195|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_182639|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_020348|CNNM1|26507|cyclin M1##AK308618|CNNM1|26507|cyclin M1##AK301916|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AY513279|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##M37400|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AF052153|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##BC000498|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK312684|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK293483|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK309174|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##NM_002079|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	0.999104	CTCF.p2:3:0.999
chr1	145457322	145457442	reg1005309.p1	12.686	+	TSC_hg19_v1_chr1_+_145438489 NM_006472 AK301203 BX537824 AK226090 S73591 BC093702 BC093704 AB527234 AY594328 BC024305 AK301148	-18706	+	NM_145277 NM_202004 NM_213652 NM_213653 AK223575 AK092682 AK315852 AX747669 BC017926 AK096905 AK290831 AK292742 AK092692 AK124273 AX747673 BC085604	-44119	+	AY894562 AY894570 NM_001039703	-164081	+	TSC_hg19_v1_chr1_-_145470375 AK092209 AK056984 BC004355 NM_032305 BC050418	13006	-	AK128050 NM_001039888 TSC_hg19_v1_chr1_+_145470529	13136	+	TSC_hg19_v1_chr1_+_145472481 AK094282	15140	+	NM_006472|TXNIP|10628|thioredoxin interacting protein##AK301203|TXNIP|10628|thioredoxin interacting protein##BX537824|TXNIP|10628|thioredoxin interacting protein##AK226090|TXNIP|10628|thioredoxin interacting protein##S73591|TXNIP|10628|thioredoxin interacting protein##BC093702|TXNIP|10628|thioredoxin interacting protein##BC093704|TXNIP|10628|thioredoxin interacting protein##AY594328|TXNIP|10628|thioredoxin interacting protein##BC024305|TXNIP|10628|thioredoxin interacting protein##AK301148|TXNIP|10628|thioredoxin interacting protein##NM_145277|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_202004|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213652|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213653|HFE2|148738|hemochromatosis type 2 (juvenile)##AK223575|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092682|HFE2|148738|hemochromatosis type 2 (juvenile)##AK315852|HFE2|148738|hemochromatosis type 2 (juvenile)##BC017926|HFE2|148738|hemochromatosis type 2 (juvenile)##AK096905|HFE2|148738|hemochromatosis type 2 (juvenile)##AK290831|HFE2|148738|hemochromatosis type 2 (juvenile)##AK292742|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092692|HFE2|148738|hemochromatosis type 2 (juvenile)##AK124273|HFE2|148738|hemochromatosis type 2 (juvenile)##BC085604|HFE2|148738|hemochromatosis type 2 (juvenile)##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8##NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10##AK092209|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##AK056984|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC004355|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##NM_032305|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC050418|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##AK128050|ANKRD34A|284615|ankyrin repeat domain 34A##NM_001039888|ANKRD34A|284615|ankyrin repeat domain 34A##AK094282|ANKRD34A|284615|ankyrin repeat domain 34A	0.991634	CTCF.p2:22:0.992
chr20	43313954	43314085	reg1007180.p1	12.686	+	BC007678 TSC_hg19_v1_chr20_-_43280372 BC040226 NM_000022	-33644	-	AB528992 DQ892681 DQ895924 TSC_hg19_v1_chr20_-_43280341 X02994 AK223397	-33721	-	AK309209 TSC_hg19_v1_chr20_+_43211227	-102796	+	BC058074 TSC_hg19_v1_chr20_+_43343549 AK074695	29523	+	NM_003881 BC017782 TSC_hg19_v1_chr20_+_43343953	29901	+	TSC_hg19_v1_chr20_+_43344010 AK313853 BC064379 AF083500 AF074604 AY358915 CU687868	29998	+	BC007678|ADA|100|adenosine deaminase##BC040226|ADA|100|adenosine deaminase##NM_000022|ADA|100|adenosine deaminase##DQ892681|ADA|100|adenosine deaminase##DQ895924|ADA|100|adenosine deaminase##X02994|ADA|100|adenosine deaminase##AK223397|ADA|100|adenosine deaminase##AK309209|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##BC058074|WISP2|8839|WNT1 inducible signaling pathway protein 2##NM_003881|WISP2|8839|WNT1 inducible signaling pathway protein 2##BC017782|WISP2|8839|WNT1 inducible signaling pathway protein 2##AK313853|WISP2|8839|WNT1 inducible signaling pathway protein 2##BC064379|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF083500|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF074604|WISP2|8839|WNT1 inducible signaling pathway protein 2##AY358915|WISP2|8839|WNT1 inducible signaling pathway protein 2	0.999906	CTCF.p2:-14:1.000
chr3	113296840	113296946	reg1005425.p2	12.686	+	NM_017699	-45676	+	AY099107 BC036951 TSC_hg19_v1_chr3_-_113234023 AK057966 AL832327 AL832148 NM_144718	-62900	-	TSC_hg19_v1_chr3_-_113233690 AK296160	-63207	-	TSC_hg19_v1_chr3_-_113415490 BC043383 NM_001009899	118519	-	AK296456 TSC_hg19_v1_chr3_-_113464788	167821	-	TSC_hg19_v1_chr3_-_113465043 CR749314 AK023090 AK307184 BC012731 AK311403 AK023256	168150	-	NM_017699|SIDT1|54847|SID1 transmembrane family, member 1##AY099107|SPICE1|152185|spindle and centriole associated protein 1##BC036951|SPICE1|152185|spindle and centriole associated protein 1##AK057966|SPICE1|152185|spindle and centriole associated protein 1##AL832327|SPICE1|152185|spindle and centriole associated protein 1##AL832148|SPICE1|152185|spindle and centriole associated protein 1##NM_144718|SPICE1|152185|spindle and centriole associated protein 1##AK296160|SPICE1|152185|spindle and centriole associated protein 1##BC043383|KIAA2018|205717|KIAA2018##NM_001009899|KIAA2018|205717|KIAA2018##AK296456|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##CR749314|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK023090|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK307184|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##BC012731|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK023256|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit	0.985654	CTCF.p2:6:0.986
chr1	11779941	11780071	reg1005105.p1	12.685	+	BC111064 NM_198545 AK075558 TSC_hg19_v1_chr1_+_11751786 AY358750	-28203	+	NM_001127325 AK094316	-28315	-	TSC_hg19_v1_chr1_-_11741180 AK027327 AF139365 AF157482 NM_006341	-38784	-	TSC_hg19_v1_chr1_+_11796132 NM_001040194 NM_001040195 NM_001040196 NM_001040197 NM_020350	16139	+	TSC_hg19_v1_chr1_+_11796198 AK290042 BC017328	16184	+	AF312374 TSC_hg19_v1_chr1_+_11796222 BC011946 AB528670 AF165187 DQ892619 DQ895859	16232	+	BC111064|C1orf187|374946|chromosome 1 open reading frame 187##NM_198545|C1orf187|374946|chromosome 1 open reading frame 187##AK075558|C1orf187|374946|chromosome 1 open reading frame 187##AY358750|C1orf187|374946|chromosome 1 open reading frame 187##NM_001127325|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##AK094316|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##AK027327|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##AF139365|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##AF157482|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##NM_006341|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##NM_001040194|AGTRAP|57085|angiotensin II receptor-associated protein##NM_001040195|AGTRAP|57085|angiotensin II receptor-associated protein##NM_001040196|AGTRAP|57085|angiotensin II receptor-associated protein##NM_001040197|AGTRAP|57085|angiotensin II receptor-associated protein##NM_020350|AGTRAP|57085|angiotensin II receptor-associated protein##AK290042|AGTRAP|57085|angiotensin II receptor-associated protein##BC017328|AGTRAP|57085|angiotensin II receptor-associated protein##AF312374|AGTRAP|57085|angiotensin II receptor-associated protein##BC011946|AGTRAP|57085|angiotensin II receptor-associated protein##AF165187|AGTRAP|57085|angiotensin II receptor-associated protein##DQ892619|AGTRAP|57085|angiotensin II receptor-associated protein##DQ895859|AGTRAP|57085|angiotensin II receptor-associated protein	0.993686	CTCF.p2:21:0.994
chr19	36438436	36438526	reg1003551.p1	12.685	+	BC003578 NM_024509	-10460	+	TSC_hg19_v1_chr19_-_36399212 NM_001173514 NM_001173515 NM_003332 NM_198125	-39268	-	TSC_hg19_v1_chr19_-_36399198 AF019562 BC011175 AK290385	-39289	-	TSC_hg19_v1_chr19_+_36486091 NM_001042631 BC007205 BC064605 BC069054 BC137516 BC137517	47613	+	CU690916 AK093764 AX748293 NM_001039876 BC052573 BC038360	61157	-	TSC_hg19_v1_chr19_-_36505110 BC036061 AK315894 BC105801 BC007601 AK304805 AK310130 AK314150	66630	-	BC003578|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_024509|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_001173514|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_001173515|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_003332|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_198125|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AF019562|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BC011175|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AK290385|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_001042631|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC007205|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC064605|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC069054|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137516|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137517|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##AK093764|C19orf46|163183|chromosome 19 open reading frame 46##NM_001039876|C19orf46|163183|chromosome 19 open reading frame 46##BC052573|C19orf46|163183|chromosome 19 open reading frame 46##BC038360|C19orf46|163183|chromosome 19 open reading frame 46##BC036061|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##AK315894|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##BC105801|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##BC007601|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##AK304805|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##AK310130|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##AK314150|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)	0.015019	
chr12	52550680	52550808	reg1004405.p1	12.684	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	-86946	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	-86990	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	-105528	+	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	35000	-	BC117348 BC126393 BC038743 NM_001242696	53819	-	NM_005556 TSC_hg19_v1_chr12_+_52626966	76218	+	BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80##BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##NM_005556|KRT7|3855|keratin 7	1.341705	CTCF.p2:-6:0.997	CTCF.p2:13:0.345
chr13	101225434	101225554	reg1006397.p1	12.684	+	AK091974 BC001077 BC004360 NM_033110	-39495	-	NM_000282 NM_001127692 NM_001178004 TSC_hg19_v1_chr13_+_100741349 AF385926 AK298318 AK225288 AK225299 AK296771 AK315503 BC000140 X14608	-484135	+	TSC_hg19_v1_chr13_+_100634271 AF104902 AF193855	-591207	+	TSC_hg19_v1_chr13_-_101241029 AK095850 NM_001195087	15533	-	AK299859 TSC_hg19_v1_chr13_-_101327050 BX648008 AK056409 AK290345 BX647956	101562	-	NM_001079669 NM_032813 TSC_hg19_v1_chr13_-_101327108	101615	-	AK091974|A2LD1|87769|AIG2-like domain 1##BC001077|A2LD1|87769|AIG2-like domain 1##BC004360|A2LD1|87769|AIG2-like domain 1##NM_033110|A2LD1|87769|AIG2-like domain 1##NM_000282|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##NM_001127692|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##NM_001178004|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AF385926|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK298318|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK225288|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK225299|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK296771|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK315503|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##BC000140|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##X14608|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AF104902|ZIC2|7546|Zic family member 2##AF193855|ZIC2|7546|Zic family member 2##AK095850|A2LD1|87769|AIG2-like domain 1##NM_001195087|A2LD1|87769|AIG2-like domain 1##AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##NM_001079669|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##NM_032813|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	0.999889	CTCF.p2:-7:1.000
chr17	10748592	10748722	reg1007389.p1	12.684	+	AK021549 TSC_hg19_v1_chr17_-_10741398 AK299808 NM_001101387	-7250	-	AY550194 NM_001004313	-115012	-	NM_020233 BC070155 AB073393 AK292629 BC001294	-147709	+	NM_001173461 NM_001173462 NM_207386	396082	+	AK094349 TSC_hg19_v1_chr17_+_11465221 BC105704 BC105705 BC105707 BC105706	716539	+	AJ404468 NM_001372 AF257737 AK055990 AK310137	753110	+	AK021549|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##AK299808|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##NM_001101387|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##AY550194|TMEM220|388335|transmembrane protein 220##NM_001004313|TMEM220|388335|transmembrane protein 220##NM_020233|C17orf48|56985|chromosome 17 open reading frame 48##BC070155|C17orf48|56985|chromosome 17 open reading frame 48##AB073393|C17orf48|56985|chromosome 17 open reading frame 48##AK292629|C17orf48|56985|chromosome 17 open reading frame 48##BC001294|C17orf48|56985|chromosome 17 open reading frame 48##NM_001173461|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_001173462|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_207386|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##AK094349|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105704|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105705|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105707|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105706|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##AJ404468|DNAH9|1770|dynein, axonemal, heavy chain 9##NM_001372|DNAH9|1770|dynein, axonemal, heavy chain 9##AF257737|DNAH9|1770|dynein, axonemal, heavy chain 9##AK055990|DNAH9|1770|dynein, axonemal, heavy chain 9##AK310137|DNAH9|1770|dynein, axonemal, heavy chain 9	0.995522	CTCF.p2:-4:0.996
chr2	114198369	114198519	reg1006947.p1	12.683	+	AK290072 NM_172003 AK303653 AY343910 TSC_hg19_v1_chr2_+_114195398 AY320414 BC120991 BC120992 AK225251 AF452722	-3105	+	S77904 S77905 S77906 X69699 BC001060 AK292191 AK309154 AK225538 NM_003466 NM_013952 NM_013953 NM_013992 TSC_hg19_v1_chr2_-_114036499	-161951	-	TSC_hg19_v1_chr2_+_113993123 AK056052 AK307781 BX537688 AK056355 AK130275	-205174	+	AK122950 NM_012184 BC136428 AY344639 AF452723	58292	+	AL137714 AK302089 AK308574 TSC_hg19_v1_chr2_+_114341674	143173	+	AK292759 AK309926 TSC_hg19_v1_chr2_+_114341689	143245	+	AK290072|CBWD2|150472|COBW domain containing 2##NM_172003|CBWD2|150472|COBW domain containing 2##AK303653|CBWD2|150472|COBW domain containing 2##AY343910|CBWD2|150472|COBW domain containing 2##AY320414|CBWD1|55871|COBW domain containing 1##BC120991|CBWD2|150472|COBW domain containing 2##BC120992|CBWD2|150472|COBW domain containing 2##AK225251|CBWD2|150472|COBW domain containing 2##AF452722|CBWD2|150472|COBW domain containing 2##S77904|PAX8|7849|paired box 8##S77905|PAX8|7849|paired box 8##S77906|PAX8|7849|paired box 8##X69699|PAX8|7849|paired box 8##BC001060|PAX8|7849|paired box 8##AK292191|PAX8|7849|paired box 8##AK309154|PAX8|7849|paired box 8##AK225538|PAX8|7849|paired box 8##NM_003466|PAX8|7849|paired box 8##NM_013952|PAX8|7849|paired box 8##NM_013953|PAX8|7849|paired box 8##NM_013992|PAX8|7849|paired box 8##AK056052|LOC654433|654433|uncharacterized LOC654433##AK307781|LOC654433|654433|uncharacterized LOC654433##BX537688|LOC654433|654433|uncharacterized LOC654433##AK056355|LOC654433|654433|uncharacterized LOC654433##AK130275|LOC654433|654433|uncharacterized LOC654433##AK122950|FOXD4L1|200350|forkhead box D4-like 1##NM_012184|FOXD4L1|200350|forkhead box D4-like 1##BC136428|FOXD4L1|200350|forkhead box D4-like 1##AY344639|FOXD4L1|200350|forkhead box D4-like 1##AF452723|FOXD4L1|200350|forkhead box D4-like 1##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK292759|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene	0.584332	CTCF.p2:15:0.584
chr5	43105914	43106028	reg1004848.p1	12.683	+	AB463523 BC067873 AY032883 NM_001014279	-65675	-	TSC_hg19_v1_chr5_-_42993436 AK056817	-112525	-	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	-293980	-	AK307963 TSC_hg19_v1_chr5_+_43121018 BC045109	15030	+	TSC_hg19_v1_chr5_+_43121609 AK299315 AK307977	15643	+	AK057343 NM_003432 TSC_hg19_v1_chr5_+_43121669 AK310735 BC017923	15713	+	BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39##AK056817|FLJ32255|643977|uncharacterized LOC643977##Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK307963|ZNF131|7690|zinc finger protein 131##AK299315|ZNF131|7690|zinc finger protein 131##AK307977|ZNF131|7690|zinc finger protein 131##AK057343|ZNF131|7690|zinc finger protein 131##NM_003432|ZNF131|7690|zinc finger protein 131##AK310735|ZNF131|7690|zinc finger protein 131##BC017923|ZNF131|7690|zinc finger protein 131	1.041052	CTCF.p2:25:0.998
chr11	87001449	87001586	reg1006373.p1	12.682	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	-252539	+	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	-335129	-	TSC_hg19_v1_chr11_-_86666094 AY462097	-335410	-	AK024853 TSC_hg19_v1_chr11_+_87032449	30925	+	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	907075	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	1069350	-	NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##AY462097|FZD4|8322|frizzled family receptor 4##AK024853|TMEM135|65084|transmembrane protein 135##BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C	0.950259	CTCF.p2:21:0.950
chr13	78353720	78353862	reg1005517.p1	12.682	+	NM_001242869 NM_001242870 NM_001242871 NM_144595 AL834203 AK289600 BC045177 AK289714 AK295423	-38385	+	AK294201 NM_001040153	-80776	+	TSC_hg19_v1_chr13_+_78271822 NM_001242868	-81887	+	TSC_hg19_v1_chr13_-_78492936 L06623 X99250 S44866 BC014472 AB209198 AK290699 NM_001122659 NM_003991	139161	-	AF114163 AF114164 TSC_hg19_v1_chr13_-_78493569	139760	-	AF114165 NM_001201397	140111	-	NM_001242869|SLAIN1|122060|SLAIN motif family, member 1##NM_001242870|SLAIN1|122060|SLAIN motif family, member 1##NM_001242871|SLAIN1|122060|SLAIN motif family, member 1##NM_144595|SLAIN1|122060|SLAIN motif family, member 1##AL834203|SLAIN1|122060|SLAIN motif family, member 1##AK289600|SLAIN1|122060|SLAIN motif family, member 1##BC045177|SLAIN1|122060|SLAIN motif family, member 1##AK289714|SLAIN1|122060|SLAIN motif family, member 1##AK295423|SLAIN1|122060|SLAIN motif family, member 1##AK294201|SLAIN1|122060|SLAIN motif family, member 1##NM_001040153|SLAIN1|122060|SLAIN motif family, member 1##NM_001242868|SLAIN1|122060|SLAIN motif family, member 1##L06623|EDNRB|1910|endothelin receptor type B##X99250|EDNRB|1910|endothelin receptor type B##S44866|EDNRB|1910|endothelin receptor type B##BC014472|EDNRB|1910|endothelin receptor type B##AB209198|EDNRB|1910|endothelin receptor type B##AK290699|EDNRB|1910|endothelin receptor type B##NM_001122659|EDNRB|1910|endothelin receptor type B##NM_003991|EDNRB|1910|endothelin receptor type B##AF114165|EDNRB|1910|endothelin receptor type B##NM_001201397|EDNRB|1910|endothelin receptor type B	0.335547	CTCF.p2:-21:0.336
chr2	42465993	42466115	reg1005414.p2	12.682	+	TSC_hg19_v1_chr2_+_42396514 AB275889 NM_001145076 NM_019063 AK314702 BC146799 AF177377 BC067777 BC104647 BC140845 AB374363 AB462412 AB384933	-69479	+	AB528999 TSC_hg19_v1_chr2_+_42275979	-190093	+	TSC_hg19_v1_chr2_+_42275160 NM_138370	-190922	+	AF127788 BT007371 CR542208 CU675543 DQ890566 DQ893729 TSC_hg19_v1_chr2_-_42588354 AB007618 BC005251 BC007095 NM_004718	122279	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	254504	-	TSC_hg19_v1_chr2_-_42721118 AF454547 AF454548 BC071558 AF348982 NM_133329 NM_172344	255149	-	NM_001145076|EML4|27436|echinoderm microtubule associated protein like 4##NM_019063|EML4|27436|echinoderm microtubule associated protein like 4##AK314702|EML4|27436|echinoderm microtubule associated protein like 4##BC146799|EML4|27436|echinoderm microtubule associated protein like 4##AF177377|EML4|27436|echinoderm microtubule associated protein like 4##BC067777|EML4|27436|echinoderm microtubule associated protein like 4##BC104647|EML4|27436|echinoderm microtubule associated protein like 4##BC140845|EML4|27436|echinoderm microtubule associated protein like 4##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)##AF127788|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BT007371|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##CR542208|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ890566|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ893729|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB007618|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC005251|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC007095|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##NM_004718|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF454547|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF454548|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##BC071558|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF348982|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##NM_133329|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##NM_172344|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3	0.839879	CTCF.p2:18:0.840
chr18	12744279	12744380	reg1004520.p1	12.681	+	TSC_hg19_v1_chr18_+_12703040 NM_020232 AK225882 AF168712 AK057005 BC013356 CU680576	-41293	+	TSC_hg19_v1_chr18_-_12702776 AK298223	-41565	-	TSC_hg19_v1_chr18_-_12702689 AK022604 BC033026 AL833727 BC026307 NM_024899 AK303117	-41654	-	CU678897 AB590517 BC008244 TSC_hg19_v1_chr18_-_12884237 M25393 AK225706 AK290649 AK292570 BC016727 NM_001207013 NM_002828 NM_080422 NM_080423	139907	-	TSC_hg19_v1_chr18_+_12947986 NM_001013437 NM_031216	203656	+	TSC_hg19_v1_chr18_+_12948009 AK314403	203677	+	NM_020232|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK225882|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AF168712|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK057005|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##BC013356|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK298223|CEP76|79959|centrosomal protein 76kDa##AK022604|CEP76|79959|centrosomal protein 76kDa##BC033026|CEP76|79959|centrosomal protein 76kDa##AL833727|CEP76|79959|centrosomal protein 76kDa##BC026307|CEP76|79959|centrosomal protein 76kDa##NM_024899|CEP76|79959|centrosomal protein 76kDa##AK303117|CEP76|79959|centrosomal protein 76kDa##BC008244|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##M25393|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK225706|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK290649|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK292570|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##BC016727|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_001207013|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_002828|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_080422|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_080423|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_001013437|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_031216|SEH1L|81929|SEH1-like (S. cerevisiae)##AK314403|SEH1L|81929|SEH1-like (S. cerevisiae)	0.965392	CTCF.p2:-2:0.965
chr2	229522631	229522735	reg1004313.p1	12.681	+	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-476321	-	AK097409 NM_178821 BC036377 AK098821 AK301861	-786331	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	-844092	+	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	613322	-	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	1056565	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	1263978	-	HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12	0.428557	CTCF.p2:29:0.429
chr11	78811264	78811384	reg1005455.p1	12.680	+	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-525429	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-525532	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	-682448	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	340400	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	3633574	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	3800193	-	AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_080491|GAB2|9846|GRB2-associated binding protein 2##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)	0.477629	CTCF.p2:11:0.478
chr3	69373659	69373784	reg1005728.p1	12.680	+	TSC_hg19_v1_chr3_-_69299315 AK295045	-74411	-	AM393202 BC121019 BC017925 AL832033 AK300096 AL832709 BC039202 NM_198271	-202081	-	TSC_hg19_v1_chr3_+_69134171 NM_006407 AF070523 AF115965 AF125530 AB097051 AF161476 AK301637 AK303148 AK074612 BC005143 BC107899 BC020797 AB014765 AK223566 AK312731 AB052638 AY102608	-239594	+	AB023230 TSC_hg19_v1_chr3_-_69435240	61510	-	NM_015123 BC057836	61720	-	TSC_hg19_v1_chr3_-_69591738 AK091076	218036	-	AK295045|FRMD4B|23150|FERM domain containing 4B##AM393202|LMOD3|56203|leiomodin 3 (fetal)##BC121019|LMOD3|56203|leiomodin 3 (fetal)##BC017925|LMOD3|56203|leiomodin 3 (fetal)##AL832033|LMOD3|56203|leiomodin 3 (fetal)##AK300096|LMOD3|56203|leiomodin 3 (fetal)##AL832709|LMOD3|56203|leiomodin 3 (fetal)##BC039202|LMOD3|56203|leiomodin 3 (fetal)##NM_198271|LMOD3|56203|leiomodin 3 (fetal)##NM_006407|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF070523|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF115965|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF125530|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB097051|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF161476|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK301637|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK074612|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC005143|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC107899|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC020797|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB014765|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK223566|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK312731|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB052638|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AY102608|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB023230|FRMD4B|23150|FERM domain containing 4B##NM_015123|FRMD4B|23150|FERM domain containing 4B##BC057836|FRMD4B|23150|FERM domain containing 4B##AK091076|FRMD4B|23150|FERM domain containing 4B	0.908229	CTCF.p2:-16:0.908
chr16	69830547	69830647	reg1003549.p1	12.679	+	TSC_hg19_v1_chr16_+_69796265 BC064531 AJ001982 NM_007014 NM_199423 U96114	-34341	+	TSC_hg19_v1_chr16_+_69796208 AK312792	-34409	+	AF190161 TSC_hg19_v1_chr16_-_69788828 BC064630 CU687926 AK314307 AK001028 AB026125 NM_014062 AY487344	-41774	-	AK126332 NM_199424 TSC_hg19_v1_chr16_+_69958904	128305	+	BC078143 NM_001136214	154028	+	AF521893 NM_182619 BC141808 AF428259 AF448856 AL833339 AK289884 AK298310 AK074773 EU831776 EU831854 CU687316 AK096051	154495	+	BC064531|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AJ001982|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_007014|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_199423|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##U96114|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AK312792|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AF190161|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##BC064630|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AK314307|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AK001028|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AB026125|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##NM_014062|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AY487344|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AK126332|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_199424|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##BC078143|CLEC18A|348174|C-type lectin domain family 18, member A##NM_001136214|CLEC18A|348174|C-type lectin domain family 18, member A##AF521893|CLEC18A|348174|C-type lectin domain family 18, member A##NM_182619|CLEC18A|348174|C-type lectin domain family 18, member A##BC141808|CLEC18A|348174|C-type lectin domain family 18, member A##AF428259|CLEC18A|348174|C-type lectin domain family 18, member A##AF448856|CLEC18C|283971|C-type lectin domain family 18, member C##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AK289884|CLEC18A|348174|C-type lectin domain family 18, member A##AK298310|CLEC18A|348174|C-type lectin domain family 18, member A##AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##EU831776|CLEC18A|348174|C-type lectin domain family 18, member A##EU831854|CLEC18A|348174|C-type lectin domain family 18, member A##AK096051|CLEC18A|348174|C-type lectin domain family 18, member A	0.653988	CTCF.p2:-4:0.598
chr5	114884975	114885096	reg1005350.p1	12.679	+	TSC_hg19_v1_chr5_-_114880540 BC028369 NM_020177	-4472	-	TSC_hg19_v1_chr5_-_114880370 AL365415 AK315803 BC098385	-4678	-	AB587510 AJ580807 NM_001040440	-252687	-	BC109265 BC109266 NM_021649	53082	-	TSC_hg19_v1_chr5_-_114961697 AK074962	76657	-	TSC_hg19_v1_chr5_-_114961708 AY304583 AY304584 BC019349 AK075218 AK304210 AK027512 NM_001164468 NM_001164469 NM_181836	76759	-	BC028369|FEM1C|56929|fem-1 homolog c (C. elegans)##NM_020177|FEM1C|56929|fem-1 homolog c (C. elegans)##AL365415|FEM1C|56929|fem-1 homolog c (C. elegans)##AK315803|FEM1C|56929|fem-1 homolog c (C. elegans)##BC098385|FEM1C|56929|fem-1 homolog c (C. elegans)##AJ580807|CCDC112|153733|coiled-coil domain containing 112##NM_001040440|CCDC112|153733|coiled-coil domain containing 112##BC109265|TICAM2|353376|toll-like receptor adaptor molecule 2##BC109266|TICAM2|353376|toll-like receptor adaptor molecule 2##NM_021649|TICAM2|353376|toll-like receptor adaptor molecule 2##AK074962|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AY304583|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AY304584|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##BC019349|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK075218|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AK304210|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK027512|TMED7|51014|transmembrane emp24 protein transport domain containing 7##NM_001164468|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_001164469|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_181836|TMED7|51014|transmembrane emp24 protein transport domain containing 7	0.260371	CTCF.p2:-13:0.260
chr1	146966925	146967047	reg1006625.p1	12.678	+	TSC_hg19_v1_chr1_+_146714335 AK298424 AK297135 BC077717 AK293157 BC001171 AF054177 BC043501 BC053354 BC005038	-252622	+	NM_004284 TSC_hg19_v1_chr1_+_146714333 EF560738 AF537213 AK001342 AK027631 AK307400	-252675	+	AK314647 TSC_hg19_v1_chr1_-_146697221 AK022172 NM_001144829 NM_001144830 NM_001461	-269794	-	NM_004326 Y13620 AK298105 TSC_hg19_v1_chr1_+_147013319	46265	+	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	175508	-	BC013313 NM_181703	265712	-	AK298424|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK297135|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC077717|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK293157|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC001171|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF054177|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC043501|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC053354|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC005038|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##NM_004284|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##EF560738|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF537213|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK001342|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK027631|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK307400|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK314647|FMO5|2330|flavin containing monooxygenase 5##AK022172|FMO5|2330|flavin containing monooxygenase 5##NM_001144829|FMO5|2330|flavin containing monooxygenase 5##NM_001144830|FMO5|2330|flavin containing monooxygenase 5##NM_001461|FMO5|2330|flavin containing monooxygenase 5##NM_004326|BCL9|607|B-cell CLL/lymphoma 9##Y13620|BCL9|607|B-cell CLL/lymphoma 9##AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa	0.909407	CTCF.p2:-15:0.909
chr6	167200319	167200456	reg1007414.p1	12.678	+	TSC_hg19_v1_chr6_-_167040713 BC002363 NM_021135	-159669	-	TSC_hg19_v1_chr6_-_167040662 X85106	-159718	-	DQ891864 DQ895053 L07598 TSC_hg19_v1_chr6_-_167040629	-159810	-	AB384854 NM_001006932 AB209116	75341	-	TSC_hg19_v1_chr6_-_167276000 AK095751	75621	-	DQ884402 TSC_hg19_v1_chr6_-_167369732	169315	-	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##X85106|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##DQ891864|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##DQ895053|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##L07598|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##AK095751|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	0.999541	CTCF.p2:-13:1.000
chr14	35192295	35192424	reg1007360.p1	12.676	+	TSC_hg19_v1_chr14_-_35183800 NM_001243645 AF134803 BC022364 BC022876 BC025683 NM_138638	-8484	-	BC011444 AK314157 NM_021914 AF134802	-9371	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	-93004	-	AB593178 TSC_hg19_v1_chr14_+_35343416 BC039097	151117	+	TSC_hg19_v1_chr14_-_35344080 BC020636	151749	-	AF086397 AF213467 TSC_hg19_v1_chr14_-_35344486	152110	-	NM_001243645|CFL2|1073|cofilin 2 (muscle)##AF134803|CFL2|1073|cofilin 2 (muscle)##BC022364|CFL2|1073|cofilin 2 (muscle)##BC022876|CFL2|1073|cofilin 2 (muscle)##BC025683|CFL2|1073|cofilin 2 (muscle)##NM_138638|CFL2|1073|cofilin 2 (muscle)##BC011444|CFL2|1073|cofilin 2 (muscle)##AK314157|CFL2|1073|cofilin 2 (muscle)##NM_021914|CFL2|1073|cofilin 2 (muscle)##AF134802|CFL2|1073|cofilin 2 (muscle)##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6##BC020636|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##AF086397|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##AF213467|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	0.0	
chr11	62673568	62673683	reg1006182.p1	12.673	+	TSC_hg19_v1_chr11_+_62649170 AK308797 AK311592 AF055031	-24433	+	TSC_hg19_v1_chr11_+_62648367 NM_001013251 AK304685 AK090758 AX746603 J03569 AK304497 AB018010 J02939 AK225304 J02769 EU832612 EU832683	-25118	+	TSC_hg19_v1_chr11_+_62623580 NM_001012662 NM_001012664 NM_002394 BC001061 AK025584 BC003000	-50075	+	BC007740 AK312374 TSC_hg19_v1_chr11_-_62688827	15158	-	BC022984 NM_000738 AJ006520 TSC_hg19_v1_chr11_-_62689135	15448	-	AK298374 AF057039 AF104038 AF124373 AB009698 AB009697 AK091879 BC033682 AK055764 NM_004790 NM_153276 NM_153277 NM_153278	78807	-	AK308797|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK311592|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AF055031|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_001013251|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK304685|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK090758|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##J03569|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK304497|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AB018010|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##J02939|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK225304|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##J02769|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##EU832612|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##EU832683|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_001012662|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_001012664|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_002394|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC001061|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK025584|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC003000|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC007740|CHRM1|1128|cholinergic receptor, muscarinic 1##AK312374|CHRM1|1128|cholinergic receptor, muscarinic 1##BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1##NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1##AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1##AK298374|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF057039|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF104038|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF124373|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009698|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009697|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK091879|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##BC033682|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK055764|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_004790|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153276|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153277|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153278|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6	0.998266	CTCF.p2:-9:0.998
chr11	109724045	109724163	reg1006643.p1	12.671	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-431205	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-431261	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-1188290	+	AK095101 TSC_hg19_v1_chr11_+_109963524	239424	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	240026	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	443209	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.0	
chr14	74829162	74829271	reg1005233.p2	12.671	+	BC053325 AK023213 TSC_hg19_v1_chr14_+_74815209 AK001673	-14014	+	NM_018228 TSC_hg19_v1_chr14_+_74815173	-14047	+	BT007412 CR457104 DQ892847 DQ896094 BC012815 TSC_hg19_v1_chr14_-_74769638 AK291332 AK308382 AF009746 AK297934 BX247984 BX248053 NM_005050	-59526	-	NM_001105579	63588	-	CU678022 DQ891907 DQ895093 X67698 AK298975 TSC_hg19_v1_chr14_-_74959988	130770	-	AK222474 TSC_hg19_v1_chr14_-_74960013 AK300879	130798	-	BC053325|VRTN|55237|vertebrae development homolog (pig)##AK023213|VRTN|55237|vertebrae development homolog (pig)##AK001673|VRTN|55237|vertebrae development homolog (pig)##NM_018228|VRTN|55237|vertebrae development homolog (pig)##BT007412|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##CR457104|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ892847|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ896094|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BC012815|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK291332|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK308382|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AF009746|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK297934|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX247984|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX248053|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_005050|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_001105579|SYNDIG1L|646658|synapse differentiation inducing 1-like##DQ891907|NPC2|10577|Niemann-Pick disease, type C2##DQ895093|NPC2|10577|Niemann-Pick disease, type C2##X67698|NPC2|10577|Niemann-Pick disease, type C2##AK298975|NPC2|10577|Niemann-Pick disease, type C2##AK222474|NPC2|10577|Niemann-Pick disease, type C2##AK300879|NPC2|10577|Niemann-Pick disease, type C2	0.997622	CTCF.p2:-8:0.998
chr2	206631616	206631749	reg1006848.p1	12.671	+	TSC_hg19_v1_chr2_+_206547371 AK290934	-84321	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	-84504	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-1220963	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	319229	-	AK295987 NM_001199984	392235	-	X61100 AK098395 BC018900 BC022368 TSC_hg19_v1_chr2_-_207024145 AK300585 BC030833 AK295705 AK295966 AK298320 BC004133 NM_001199981 NM_001199982 NM_001199983 NM_005006	392490	-	AK290934|NRP2|8828|neuropilin 2##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D##AK295987|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199984|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	0.996031	CTCF.p2:-11:0.996
chr15	92620718	92620815	reg1005063.p1	12.669	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-223199	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	-223669	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	-223823	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	316433	+	AK057393 NM_153040	394140	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	578113	-	AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B	0.961303	CTCF.p2:9:0.961
chr22	21051935	21052053	reg1004930.p2	12.669	+	TSC_hg19_v1_chr22_+_20918811 U80745	-133170	+	BC017110 TSC_hg19_v1_chr22_+_20909388	-142687	+	AB463109 CU013137 CU013425 AF328769 TSC_hg19_v1_chr22_+_20861965	-190030	+	L36151 NM_002650	36960	-	TSC_hg19_v1_chr22_+_21128411 NM_000185 AK314200 AK225292 BC035028	76402	+	AB384703 TSC_hg19_v1_chr22_-_21213029 AK302424	161036	-	U80745|MED15|51586|mediator complex subunit 15##BC017110|MED15|51586|mediator complex subunit 15##CU013137|MED15|51586|mediator complex subunit 15##CU013425|MED15|51586|mediator complex subunit 15##AF328769|MED15|51586|mediator complex subunit 15##L36151|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_002650|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_000185|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK314200|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK225292|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##BC035028|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK302424|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha	0.976854	CTCF.p2:19:0.977
chr3	46671564	46671684	reg1004305.p1	12.669	+	AK130758 NM_001195442	-17700	+	NM_003212 X14253 BC022393 BC067844 AK313319 AB590665 CU688358 CU692602 EU832709	-52357	+	NM_001174136	-55580	+	AK092455 AX747555 NM_182775 AK126505	47297	-	TSC_hg19_v1_chr3_-_46735168 AK131270 NM_001190707 CR627258 AL832203 AB107015 AL832132 NM_147129	63565	-	AY081842 NM_147196 BC126258 BC126260	71216	+	AK130758|LOC100132146|100132146|uncharacterized LOC100132146##NM_001195442|LOC100132146|100132146|uncharacterized LOC100132146##NM_003212|TDGF1|6997|teratocarcinoma-derived growth factor 1##X14253|TDGF1|6997|teratocarcinoma-derived growth factor 1##BC022393|TDGF1|6997|teratocarcinoma-derived growth factor 1##BC067844|TDGF1|6997|teratocarcinoma-derived growth factor 1##AK313319|TDGF1|6997|teratocarcinoma-derived growth factor 1##EU832709|TDGF1|6997|teratocarcinoma-derived growth factor 1##NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1##AK092455|ALS2CL|259173|ALS2 C-terminal like##NM_182775|ALS2CL|259173|ALS2 C-terminal like##AK126505|ALS2CL|259173|ALS2 C-terminal like##AK131270|ALS2CL|259173|ALS2 C-terminal like##NM_001190707|ALS2CL|259173|ALS2 C-terminal like##CR627258|ALS2CL|259173|ALS2 C-terminal like##AL832203|ALS2CL|259173|ALS2 C-terminal like##AB107015|ALS2CL|259173|ALS2 C-terminal like##AL832132|ALS2CL|259173|ALS2 C-terminal like##NM_147129|ALS2CL|259173|ALS2 C-terminal like##AY081842|TMIE|259236|transmembrane inner ear##NM_147196|TMIE|259236|transmembrane inner ear##BC126258|TMIE|259236|transmembrane inner ear##BC126260|TMIE|259236|transmembrane inner ear	0.652832	CTCF.p2:14:0.487
chr5	150899929	150900063	reg1008063.p1	12.669	+	TSC_hg19_v1_chr5_+_150827239 AY162213 BC136437 BC136438	-72752	+	AK309323 TSC_hg19_v1_chr5_+_150827187	-72807	+	TSC_hg19_v1_chr5_+_150827163 NM_078483 BX537963 AY227111	-72836	+	AF231022 NM_001447	48508	-	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	166465	-	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	166512	-	AY162213|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136437|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136438|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AK309323|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##NM_078483|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BX537963|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AY227111|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)	0.050906	
chr1	201678746	201678855	reg1006164.p1	12.667	+	TSC_hg19_v1_chr1_+_201617793 BC117683 AJ488101	-61072	+	AY043013 NM_020443 TSC_hg19_v1_chr1_+_201617460	-61345	+	TSC_hg19_v1_chr1_+_201476345 AK097932	-202439	+	TSC_hg19_v1_chr1_+_201708656 AK056158	29852	+	TSC_hg19_v1_chr1_+_201709027 NM_001167738 BX648460	30184	+	TSC_hg19_v1_chr1_+_201709059 BC069250	30265	+	BC117683|NAV1|89796|neuron navigator 1##AJ488101|NAV1|89796|neuron navigator 1##AY043013|NAV1|89796|neuron navigator 1##NM_020443|NAV1|89796|neuron navigator 1##AK056158|NAV1|89796|neuron navigator 1##NM_001167738|NAV1|89796|neuron navigator 1##BX648460|NAV1|89796|neuron navigator 1##BC069250|NAV1|89796|neuron navigator 1	0.992273	CTCF.p2:-13:0.992
chr17	16267211	16267338	reg1006729.p1	12.667	+	TSC_hg19_v1_chr17_-_16256824 BC137486 BC137487	-10441	-	TSC_hg19_v1_chr17_-_16256747 AF514992 NM_181716 BC052604	-10512	-	TSC_hg19_v1_chr17_+_16120523 NM_004278 AK292932 AK302523 AK296120 BC068197 AB017165 CU686621	-146768	+	TSC_hg19_v1_chr17_+_16284371 BC000379 NM_018955	17090	+	TSC_hg19_v1_chr17_+_16284404 AK300882	17128	+	AK129498 BC015127 BC026301 BC031027 BC038999 TSC_hg19_v1_chr17_+_16284408 BC046123 BC009301	17140	+	BC137486|CENPV|201161|centromere protein V##BC137487|CENPV|201161|centromere protein V##AF514992|CENPV|201161|centromere protein V##NM_181716|CENPV|201161|centromere protein V##BC052604|CENPV|201161|centromere protein V##NM_004278|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK292932|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK302523|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK296120|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##BC068197|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AB017165|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##BC000379|UBB|7314|ubiquitin B##NM_018955|UBB|7314|ubiquitin B##AK300882|UBB|7314|ubiquitin B##AK129498|UBB|7314|ubiquitin B##BC015127|UBB|7314|ubiquitin B##BC026301|UBB|7314|ubiquitin B##BC031027|UBB|7314|ubiquitin B##BC038999|UBB|7314|ubiquitin B##BC046123|UBB|7314|ubiquitin B##BC009301|UBB|7314|ubiquitin B	0.998248	CTCF.p2:-5:0.998
chr11	117314388	117314499	reg1005494.p2	12.665	+	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-115612	+	TSC_hg19_v1_chr11_+_117198594 BX648682 NM_014956 BC054015	-115859	+	TSC_hg19_v1_chr11_-_117186973 AF324837 AB032975 AF201468 AF190725 BC036084 AK075049 BC065492 NM_012104 NM_138971 NM_138972 NM_138973	-127463	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	353410	-	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	353516	-	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	380991	-	AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##BX648682|CEP164|22897|centrosomal protein 164kDa##NM_014956|CEP164|22897|centrosomal protein 164kDa##BC054015|CEP164|22897|centrosomal protein 164kDa##AF324837|BACE1|23621|beta-site APP-cleaving enzyme 1##AB032975|BACE1|23621|beta-site APP-cleaving enzyme 1##AF201468|BACE1|23621|beta-site APP-cleaving enzyme 1##AF190725|BACE1|23621|beta-site APP-cleaving enzyme 1##BC036084|BACE1|23621|beta-site APP-cleaving enzyme 1##AK075049|BACE1|23621|beta-site APP-cleaving enzyme 1##BC065492|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_012104|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138971|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138972|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138973|BACE1|23621|beta-site APP-cleaving enzyme 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2	0.0	
chr8	11269100	11269236	reg1006946.p1	12.665	+	BC038546 TSC_hg19_v1_chr8_-_11205010	-64164	-	AJ291677 NM_054028 BC131696	-80658	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	-126813	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	55061	-	S76617 NM_001715 BC018703 BC004473 BC038555	82425	+	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	292552	+	BC038546|LOC100129129|100129129|uncharacterized LOC100129129##AJ291677|SLC35G5|83650|solute carrier family 35, member G5##NM_054028|SLC35G5|83650|solute carrier family 35, member G5##BC131696|SLC35G5|83650|solute carrier family 35, member G5##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4	0.549928	CTCF.p2:5:0.550
chr12	8198734	8198851	reg1006842.p1	12.664	+	TSC_hg19_v1_chr12_+_8185313 BC032608 NM_018416	-13302	+	CR457413 CU691674 DQ891118 DQ894297 DQ894299 AB209607 BC039196 AK304509 AK298673 AK312386 M20681 TSC_hg19_v1_chr12_-_8088888 NM_006931	-110026	-	AK299037 AK316238 TSC_hg19_v1_chr12_-_8043786	-155024	-	TSC_hg19_v1_chr12_-_8218956 U28488 AK290242 AK312458 BC020742 NM_004054 AK223388	20161	-	TSC_hg19_v1_chr12_-_8219032 U62027	20224	-	TSC_hg19_v1_chr12_+_8234872 NM_015509 AK074880 AK074858 AK074923 AK303675 AK314424 BC110876 AL050272 AK290537 BC002888	36059	+	NM_018416|FOXJ2|55810|forkhead box J2##CR457413|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ891118|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894297|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894299|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AB209607|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##BC039196|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK304509|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK298673|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK312386|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##M20681|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##NM_006931|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##U28488|C3AR1|719|complement component 3a receptor 1##AK290242|C3AR1|719|complement component 3a receptor 1##AK312458|C3AR1|719|complement component 3a receptor 1##BC020742|C3AR1|719|complement component 3a receptor 1##NM_004054|C3AR1|719|complement component 3a receptor 1##AK223388|C3AR1|719|complement component 3a receptor 1##U62027|C3AR1|719|complement component 3a receptor 1##NM_015509|NECAP1|25977|NECAP endocytosis associated 1##AK074880|NECAP1|25977|NECAP endocytosis associated 1##AK074858|NECAP1|25977|NECAP endocytosis associated 1##AK074923|NECAP1|25977|NECAP endocytosis associated 1##AK303675|NECAP1|25977|NECAP endocytosis associated 1##AK314424|NECAP1|25977|NECAP endocytosis associated 1##BC110876|NECAP1|25977|NECAP endocytosis associated 1##AL050272|NECAP1|25977|NECAP endocytosis associated 1##AK290537|NECAP1|25977|NECAP endocytosis associated 1##BC002888|NECAP1|25977|NECAP endocytosis associated 1	1.152332	CTCF.p2:-8:0.998
chr20	48158382	48158499	reg1004691.p1	12.664	+	BC110572 BC110573 NM_004975	-59261	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-263245	+	TSC_hg19_v1_chr20_+_47895176 BC042807 CR936805	-263268	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	26249	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	171790	-	AB004550 TSC_hg19_v1_chr20_-_48330359	171916	-	BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC042807|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##CR936805|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.063434	
chr15	52069326	52069437	reg1005880.p2	12.663	+	TSC_hg19_v1_chr15_+_52043793 NM_001142885 NM_014548 BC036184 BC064961 BC052749 AF177169 AK293823 AK292733	-25558	+	NM_001143917 TSC_hg19_v1_chr15_-_52043732 BC022075	-25666	-	TSC_hg19_v1_chr15_-_52030323 AY125955 BC033515 NM_153374	-39122	-	TSC_hg19_v1_chr15_+_52121827 NM_014547 AK312569	52446	+	TSC_hg19_v1_chr15_+_52121876 BX647277 AF177171 BC020542	52638	+	TSC_hg19_v1_chr15_+_52201590 AK025704	132229	+	NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)##NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)##BC036184|TMOD2|29767|tropomodulin 2 (neuronal)##BC064961|TMOD2|29767|tropomodulin 2 (neuronal)##AF177169|TMOD2|29767|tropomodulin 2 (neuronal)##AK293823|TMOD2|29767|tropomodulin 2 (neuronal)##AK292733|TMOD2|29767|tropomodulin 2 (neuronal)##NM_001143917|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##BC022075|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##AY125955|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##BC033515|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##NM_153374|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##NM_014547|TMOD3|29766|tropomodulin 3 (ubiquitous)##AK312569|TMOD3|29766|tropomodulin 3 (ubiquitous)##BX647277|TMOD3|29766|tropomodulin 3 (ubiquitous)##AF177171|TMOD3|29766|tropomodulin 3 (ubiquitous)##BC020542|TMOD3|29766|tropomodulin 3 (ubiquitous)##AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)	0.910883	CTCF.p2:4:0.911
chr9	85949281	85949400	reg1005411.p1	12.663	+	BC037253 NM_001244961	-2465	-	GQ129452 BC023560 NM_001244962	-67193	-	BC023566 NM_152573 TSC_hg19_v1_chr9_-_85678058 AK056176	-271274	-	NM_001244960 AY137774	133319	-	AK094281 EF560742 TSC_hg19_v1_chr9_-_86153270 AK297722 AK223597 NM_001244959 NM_174938 BC041376	203865	-	BC142991 BC036421 BC045782 TSC_hg19_v1_chr9_+_86238057 NM_001001551 NM_001190727 AY615889	288640	+	BC037253|FRMD3|257019|FERM domain containing 3##NM_001244961|FRMD3|257019|FERM domain containing 3##GQ129452|FRMD3|257019|FERM domain containing 3##BC023560|FRMD3|257019|FERM domain containing 3##NM_001244962|FRMD3|257019|FERM domain containing 3##BC023566|RASEF|158158|RAS and EF-hand domain containing##NM_152573|RASEF|158158|RAS and EF-hand domain containing##AK056176|RASEF|158158|RAS and EF-hand domain containing##NM_001244960|FRMD3|257019|FERM domain containing 3##AY137774|FRMD3|257019|FERM domain containing 3##AK094281|FRMD3|257019|FERM domain containing 3##EF560742|FRMD3|257019|FERM domain containing 3##AK297722|FRMD3|257019|FERM domain containing 3##AK223597|FRMD3|257019|FERM domain containing 3##NM_001244959|FRMD3|257019|FERM domain containing 3##NM_174938|FRMD3|257019|FERM domain containing 3##BC041376|FRMD3|257019|FERM domain containing 3##BC142991|C9orf103|414328|chromosome 9 open reading frame 103##BC036421|C9orf103|414328|chromosome 9 open reading frame 103##BC045782|C9orf103|414328|chromosome 9 open reading frame 103##NM_001001551|C9orf103|414328|chromosome 9 open reading frame 103##NM_001190727|C9orf103|414328|chromosome 9 open reading frame 103##AY615889|C9orf103|414328|chromosome 9 open reading frame 103	0.990382	CTCF.p2:2:0.990
chr14	55109811	55109929	reg1005755.p1	12.662	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	-75234	+	NM_001161576 NM_015589 BC057838 TSC_hg19_v1_chr14_+_55034359	-75526	+	AK315318 AK289478 TSC_hg19_v1_chr14_+_54976623 NM_006568 BC015063 U66469 CU677207 EU832831 GQ129438	-133259	+	TSC_hg19_v1_chr14_+_55168831 AB028976	59019	+	NM_001161577 BC021726	111657	+	AY137463 AY137464 AY137465 Z16418 S44049 CR536551 DQ892998 DQ896245 S43856 S44053 TSC_hg19_v1_chr14_-_55369545 Z29433 Z29434 U66095 BC025415 U19523 U66097 NM_000161 NM_001024024 NM_001024070 NM_001024071	259544	-	AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_001161576|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_015589|SAMD4A|23034|sterile alpha motif domain containing 4A##BC057838|SAMD4A|23034|sterile alpha motif domain containing 4A##AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1##AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1##NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1##BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1##U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1##EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1##GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1##AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_001161577|SAMD4A|23034|sterile alpha motif domain containing 4A##BC021726|SAMD4A|23034|sterile alpha motif domain containing 4A##AY137463|GCH1|2643|GTP cyclohydrolase 1##AY137464|GCH1|2643|GTP cyclohydrolase 1##AY137465|GCH1|2643|GTP cyclohydrolase 1##Z16418|GCH1|2643|GTP cyclohydrolase 1##S44049|GCH1|2643|GTP cyclohydrolase 1##CR536551|GCH1|2643|GTP cyclohydrolase 1##DQ892998|GCH1|2643|GTP cyclohydrolase 1##DQ896245|GCH1|2643|GTP cyclohydrolase 1##S43856|GCH1|2643|GTP cyclohydrolase 1##S44053|GCH1|2643|GTP cyclohydrolase 1##Z29433|GCH1|2643|GTP cyclohydrolase 1##Z29434|GCH1|2643|GTP cyclohydrolase 1##U66095|GCH1|2643|GTP cyclohydrolase 1##BC025415|GCH1|2643|GTP cyclohydrolase 1##U19523|GCH1|2643|GTP cyclohydrolase 1##U66097|GCH1|2643|GTP cyclohydrolase 1##NM_000161|GCH1|2643|GTP cyclohydrolase 1##NM_001024024|GCH1|2643|GTP cyclohydrolase 1##NM_001024070|GCH1|2643|GTP cyclohydrolase 1##NM_001024071|GCH1|2643|GTP cyclohydrolase 1	0.313437	CTCF.p2:16:0.313
chr9	34899691	34899811	reg1004555.p1	12.662	+	AK301951 AK302320 NM_001141917	-170253	-	AF001979 CR450326 AB463486 DQ892048 DQ895242 AY358887 U88320 BC027918 AB002409 AK311901 TSC_hg19_v1_chr9_-_34710134 NM_002989	-189647	-	CR456868 U77180 AB590424 DQ895236 EU176240 U88321 BC027968 AK311945 AX772806 AB000887 NM_006274	-208547	-	TSC_hg19_v1_chr9_+_34958175 BC041169 NM_015297	58430	+	AB028968 TSC_hg19_v1_chr9_+_34958324	58572	+	NM_001135004 NM_012266 TSC_hg19_v1_chr9_+_34989739 AK023253 BC012115 AK314671 AF087870	89966	+	AK302320|FAM205A|259308|family with sequence similarity 205, member A##NM_001141917|FAM205A|259308|family with sequence similarity 205, member A##AF001979|CCL21|6366|chemokine (C-C motif) ligand 21##CR450326|CCL21|6366|chemokine (C-C motif) ligand 21##DQ892048|CCL21|6366|chemokine (C-C motif) ligand 21##DQ895242|CCL21|6366|chemokine (C-C motif) ligand 21##AY358887|CCL21|6366|chemokine (C-C motif) ligand 21##U88320|CCL21|6366|chemokine (C-C motif) ligand 21##BC027918|CCL21|6366|chemokine (C-C motif) ligand 21##AB002409|CCL21|6366|chemokine (C-C motif) ligand 21##AK311901|CCL21|6366|chemokine (C-C motif) ligand 21##NM_002989|CCL21|6366|chemokine (C-C motif) ligand 21##CR456868|CCL19|6363|chemokine (C-C motif) ligand 19##U77180|CCL19|6363|chemokine (C-C motif) ligand 19##DQ895236|CCL19|6363|chemokine (C-C motif) ligand 19##EU176240|CCL19|6363|chemokine (C-C motif) ligand 19##U88321|CCL19|6363|chemokine (C-C motif) ligand 19##BC027968|CCL19|6363|chemokine (C-C motif) ligand 19##AK311945|CCL19|6363|chemokine (C-C motif) ligand 19##AX772806|CCL19|6363|chemokine (C-C motif) ligand 19##AB000887|CCL19|6363|chemokine (C-C motif) ligand 19##NM_006274|CCL19|6363|chemokine (C-C motif) ligand 19##BC041169|KIAA1045|23349|KIAA1045##NM_015297|KIAA1045|23349|KIAA1045##AB028968|KIAA1045|23349|KIAA1045##NM_001135004|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##NM_012266|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK023253|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK314671|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AF087870|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5	1.894647	CTCF.p2:-7:0.983	CTCF.p2:-27:0.912
chr9	130268242	130268335	reg1005405.p1	12.661	+	BC009239 NM_001005374	-53755	+	NM_001005373 NM_001190723 TSC_hg19_v1_chr9_+_130213788 AK056203 NM_138361 AK226106 AY358830	-54504	+	BC059950 BC094831 BC050644 BC071921 L06505 AF037643 AB209471 AK026526 AK057602 BC105603 D28443 NM_000976	-54608	-	AB210016 BC067366 TSC_hg19_v1_chr9_-_130331266	62917	-	TSC_hg19_v1_chr9_-_130331353 BC110345 NM_022833 AF192911	63107	-	TSC_hg19_v1_chr9_-_130341311 AF151783 NM_001035534	73000	-	BC009239|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001005374|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001005373|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001190723|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AK056203|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_138361|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AK226106|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AY358830|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##BC059950|RPL12|6136|ribosomal protein L12##BC094831|RPL12|6136|ribosomal protein L12##BC050644|RPL12|6136|ribosomal protein L12##L06505|RPL12|6136|ribosomal protein L12##AB209471|RPL12|6136|ribosomal protein L12##AK026526|RPL12|6136|ribosomal protein L12##AK057602|RPL12|6136|ribosomal protein L12##BC105603|RPL12|6136|ribosomal protein L12##D28443|RPL12|6136|ribosomal protein L12##NM_000976|RPL12|6136|ribosomal protein L12##AB210016|FAM129B|64855|family with sequence similarity 129, member B##BC067366|FAM129B|64855|family with sequence similarity 129, member B##BC110345|FAM129B|64855|family with sequence similarity 129, member B##NM_022833|FAM129B|64855|family with sequence similarity 129, member B##AF192911|FAM129B|64855|family with sequence similarity 129, member B##AF151783|FAM129B|64855|family with sequence similarity 129, member B##NM_001035534|FAM129B|64855|family with sequence similarity 129, member B	0.010607	
chrX	130845128	130845274	reg1004961.p1	12.660	+	BC137050 AB529233 NM_001004486	-167203	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-421789	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-421939	-	TSC_hg19_v1_chrX_-_130964633 AK097911	119450	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	312120	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	312439	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.422105	CTCF.p2:-42:0.422
chr2	192431129	192431247	reg1004541.p1	12.659	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-321090	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-414881	-	TSC_hg19_v1_chr2_-_192015965 NM_003151	-415229	-	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	111674	+	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	280550	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	280783	-	NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##NM_003151|STAT4|6775|signal transducer and activator of transcription 4##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response	0.97838	CTCF.p2:-11:0.978
chr5	140792459	140792573	reg1004264.p1	12.659	+	AF152335 AF152522 NM_018926 NM_032100	-4747	+	TSC_hg19_v1_chr5_+_140782367 BC132769 AF152329 AF152516 NM_018921 NM_032089	-10073	+	BC093877 BC093879 AB384865 AF152334 AF152521 NM_018925 NM_032099	-14868	+	TSC_hg19_v1_chr5_+_140792580 BC014509 BC093873 BC093875 AF152319 AF152503 NM_018913 NM_032090	108	+	TSC_hg19_v1_chr5_+_140797217 NM_032101	4700	+	TSC_hg19_v1_chr5_+_140797246 NM_018927	4735	+	AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6##AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6##NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6##NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6##BC132769|PCDHGA9|56107|protocadherin gamma subfamily A, 9##AF152329|PCDHGA9|56107|protocadherin gamma subfamily A, 9##AF152516|PCDHGA9|56107|protocadherin gamma subfamily A, 9##NM_018921|PCDHGA9|56107|protocadherin gamma subfamily A, 9##NM_032089|PCDHGA9|56107|protocadherin gamma subfamily A, 9##BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5##BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5##AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5##AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5##NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5##NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5##BC014509|PCDHGA10|56106|protocadherin gamma subfamily A, 10##BC093873|PCDHGA10|56106|protocadherin gamma subfamily A, 10##BC093875|PCDHGA10|56106|protocadherin gamma subfamily A, 10##AF152319|PCDHGA10|56106|protocadherin gamma subfamily A, 10##AF152503|PCDHGA10|56106|protocadherin gamma subfamily A, 10##NM_018913|PCDHGA10|56106|protocadherin gamma subfamily A, 10##NM_032090|PCDHGA10|56106|protocadherin gamma subfamily A, 10##NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7##NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7	0.0	
chr6	111378632	111378746	reg1006049.p1	12.659	+	AK292165 TSC_hg19_v1_chr6_+_111303240 AK024740 AK301662 AL833613 BC005347 BC035314 NM_032194 CU690066	-75415	+	BC011593 TSC_hg19_v1_chr6_+_111279945 AK057977 EF137904	-98731	+	AF361492 AF361496 NM_138408 BC104655 TSC_hg19_v1_chr6_+_111279890	-98859	+	TSC_hg19_v1_chr6_+_111408673 AK126183 BC034031	29987	+	AB057445 NM_018593 BC066985 TSC_hg19_v1_chr6_+_111408810	30106	+	NM_153369 TSC_hg19_v1_chr6_+_111580541 AK093136 AX747946 AK292735 AK315016	201834	+	AK292165|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK024740|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK301662|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AL833613|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC005347|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC035314|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##NM_032194|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC011593|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AK057977|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##EF137904|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AK126183|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC034031|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##AB057445|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##NM_018593|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC066985|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##NM_153369|KIAA1919|91749|KIAA1919##AK093136|KIAA1919|91749|KIAA1919##AK292735|KIAA1919|91749|KIAA1919##AK315016|KIAA1919|91749|KIAA1919	0.843182	CTCF.p2:-2:0.843
chr12	57233816	57233938	reg1007380.p1	12.658	+	AK313423 BC020710 NM_003725 TSC_hg19_v1_chr12_+_57157107 U89281 AF223225	-76766	+	AB528338 CU675073 EU176421 EU176762 TSC_hg19_v1_chr12_-_57146108 AK223391 AK314866 X74330 BC005266 NM_000946	-87751	-	TSC_hg19_v1_chr12_-_57119316 NM_001113202 NM_001113203	-114559	-	AY044434 BC101551 BC101553 AK122782 NM_148897	94239	-	AF057034 NM_003708	117522	-	BC034761 NM_007264 Y13583	154414	+	AK313423|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##BC020710|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##NM_003725|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##U89281|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##AF223225|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##EU176421|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##EU176762|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##AK223391|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##AK314866|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##X74330|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##BC005266|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##NM_000946|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit##NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY044434|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC101551|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC101553|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##AK122782|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##NM_148897|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##AF057034|RDH16|8608|retinol dehydrogenase 16 (all-trans)##NM_003708|RDH16|8608|retinol dehydrogenase 16 (all-trans)##BC034761|GPR182|11318|G protein-coupled receptor 182##NM_007264|GPR182|11318|G protein-coupled receptor 182##Y13583|GPR182|11318|G protein-coupled receptor 182	0.963764	CTCF.p2:-4:0.964
chr13	111245951	111246103	reg1005290.p1	12.658	+	AJ272065 CU693106 DQ892145 DQ895340 TSC_hg19_v1_chr13_-_111214042 AK000436 AK000446 NM_017817 BC026025	-32055	-	X05610 TSC_hg19_v1_chr13_+_111154089	-91976	+	TSC_hg19_v1_chr13_+_111138079 M24766	-107939	+	TSC_hg19_v1_chr13_+_111267870 NM_001242882 NM_001242883	21803	+	TSC_hg19_v1_chr13_+_111267898 AK093771 AK298917 AX748297 AK302117 AK057767 AK296758 NM_001242881 NM_018210 AK296227 AK024260 BC041028 AK001631 AK225129	22015	+	TSC_hg19_v1_chr13_-_111268694 AK095260	22671	-	AJ272065|RAB20|55647|RAB20, member RAS oncogene family##DQ892145|RAB20|55647|RAB20, member RAS oncogene family##DQ895340|RAB20|55647|RAB20, member RAS oncogene family##AK000436|RAB20|55647|RAB20, member RAS oncogene family##AK000446|RAB20|55647|RAB20, member RAS oncogene family##NM_017817|RAB20|55647|RAB20, member RAS oncogene family##BC026025|RAB20|55647|RAB20, member RAS oncogene family##X05610|COL4A2|1284|collagen, type IV, alpha 2##M24766|COL4A2|1284|collagen, type IV, alpha 2##NM_001242882|CARKD|55739|carbohydrate kinase domain containing##NM_001242883|CARKD|55739|carbohydrate kinase domain containing##AK093771|CARKD|55739|carbohydrate kinase domain containing##AK298917|CARKD|55739|carbohydrate kinase domain containing##AK302117|CARKD|55739|carbohydrate kinase domain containing##AK057767|CARKD|55739|carbohydrate kinase domain containing##AK296758|CARKD|55739|carbohydrate kinase domain containing##NM_001242881|CARKD|55739|carbohydrate kinase domain containing##NM_018210|CARKD|55739|carbohydrate kinase domain containing##AK296227|CARKD|55739|carbohydrate kinase domain containing##AK024260|CARKD|55739|carbohydrate kinase domain containing##BC041028|CARKD|55739|carbohydrate kinase domain containing##AK001631|CARKD|55739|carbohydrate kinase domain containing##AK225129|CARKD|55739|carbohydrate kinase domain containing	0.977112	CTCF.p2:-9:0.977
chr16	11490199	11490342	reg1007995.p1	12.658	+	TSC_hg19_v1_chr16_+_11439315 BC013040	-50952	+	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	-50976	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-115128	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	189917	-	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	190519	-	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	272028	+	BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin	0.996275	CTCF.p2:-8:0.996
chr2	203043172	203043318	reg1007011.p1	12.658	+	AB017365 NM_003507 AB010881 BC015915 CU677505	-143906	+	AB053308 AX772791 NM_139158 AK131512 BX647394 BC038807 EU831752 EU831828	-371953	+	NM_001135745 NM_020919	-397351	-	X99586 TSC_hg19_v1_chr2_-_203103288 U38784 U67122 BC053528 AK311840 BC005899 AB062294 BC066306 BC006462 U83117 U61397 NM_001005781 NM_001005782 NM_003352	60023	-	TSC_hg19_v1_chr2_+_203130458 AK300844 AK307396 AL117554 BC001707	87211	+	TSC_hg19_v1_chr2_+_203130493 BC018805 BC009306 BC032592 NM_015934 DQ890868 EU176490 AB528451 CU689436 AF123534 AF263608	87327	+	AB017365|FZD7|8324|frizzled family receptor 7##NM_003507|FZD7|8324|frizzled family receptor 7##AB010881|FZD7|8324|frizzled family receptor 7##BC015915|FZD7|8324|frizzled family receptor 7##AB053308|CDK15|65061|cyclin-dependent kinase 15##AX772791|CDK15|65061|cyclin-dependent kinase 15##NM_139158|CDK15|65061|cyclin-dependent kinase 15##AK131512|CDK15|65061|cyclin-dependent kinase 15##BX647394|CDK15|65061|cyclin-dependent kinase 15##BC038807|CDK15|65061|cyclin-dependent kinase 15##EU831752|CDK15|65061|cyclin-dependent kinase 15##EU831828|CDK15|65061|cyclin-dependent kinase 15##NM_001135745|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##NM_020919|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##X99586|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U38784|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U67122|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC053528|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK311840|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC005899|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AB062294|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC066306|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC006462|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U83117|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U61397|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005781|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005782|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_003352|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK300844|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK307396|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AL117554|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC001707|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC018805|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC009306|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC032592|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##NM_015934|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##DQ890868|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##EU176490|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AF123534|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AF263608|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)	0.287994	CTCF.p2:17:0.288
chr11	18265439	18265560	reg1006892.p1	12.657	+	NM_006512 TSC_hg19_v1_chr11_-_18258385	-7112	-	BC007026 AK312182 M81349 TSC_hg19_v1_chr11_-_18258350	-7155	-	BC095509 NM_054032	-71116	+	M26152 AK307163 BC020795 BC058008 TSC_hg19_v1_chr11_-_18270183 NM_001127380 NM_001199744 NM_030754	4694	-	NM_000331 NM_001178006 NM_199161 TSC_hg19_v1_chr11_+_18287810 BC007022 BC105796	22309	+	BC033640 TSC_hg19_v1_chr11_-_18343678 AK291663 AK292436 AB023234 AF534400 AF534401 AF534402 NM_007216 NM_181507 NM_181508 AY142148	78211	-	NM_006512|SAA4|6291|serum amyloid A4, constitutive##BC007026|SAA4|6291|serum amyloid A4, constitutive##AK312182|SAA4|6291|serum amyloid A4, constitutive##M81349|SAA4|6291|serum amyloid A4, constitutive##BC095509|MRGPRX4|117196|MAS-related GPR, member X4##NM_054032|MRGPRX4|117196|MAS-related GPR, member X4##M26152|SAA2|6289|serum amyloid A2##AK307163|SAA2|6289|serum amyloid A2##BC020795|SAA2|6289|serum amyloid A2##BC058008|SAA2|6289|serum amyloid A2##NM_001127380|SAA2|6289|serum amyloid A2##NM_001199744|SAA2-SAA4|100528017|SAA2-SAA4 readthrough##NM_030754|SAA2|6289|serum amyloid A2##NM_000331|SAA1|6288|serum amyloid A1##NM_001178006|SAA1|6288|serum amyloid A1##NM_199161|SAA1|6288|serum amyloid A1##BC007022|SAA1|6288|serum amyloid A1##BC105796|SAA1|6288|serum amyloid A1##BC033640|HPS5|11234|Hermansky-Pudlak syndrome 5##AK291663|HPS5|11234|Hermansky-Pudlak syndrome 5##AK292436|HPS5|11234|Hermansky-Pudlak syndrome 5##AB023234|HPS5|11234|Hermansky-Pudlak syndrome 5##AF534400|HPS5|11234|Hermansky-Pudlak syndrome 5##AF534401|HPS5|11234|Hermansky-Pudlak syndrome 5##AF534402|HPS5|11234|Hermansky-Pudlak syndrome 5##NM_007216|HPS5|11234|Hermansky-Pudlak syndrome 5##NM_181507|HPS5|11234|Hermansky-Pudlak syndrome 5##NM_181508|HPS5|11234|Hermansky-Pudlak syndrome 5	0.127613	
chr2	43086236	43086368	reg1007015.p1	12.657	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-66551	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-95002	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-290405	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	367043	-	TSC_hg19_v1_chr2_-_43453736 BC020369	367428	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	367440	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.999642	CTCF.p2:-17:1.000
chr1	206652966	206653098	reg1005786.p2	12.656	+	TSC_hg19_v1_chr1_+_206643833 BC105923 BC105924 BC107591 BC107812 D63485	-9187	+	TSC_hg19_v1_chr1_+_206643818 AK093798 AK310737 AY660028	-9226	+	NM_001193321 NM_001193322 NM_014002	-9447	+	TSC_hg19_v1_chr1_+_206680860 AK289861	27829	+	TSC_hg19_v1_chr1_+_206680863 AK291268 AY062002 AY062003 BC004270 BC007203 NM_182663 NM_182664 AB209145 DQ892961 DQ896208	27869	+	TSC_hg19_v1_chr1_+_206730491 NM_182665 AF445801	77443	+	BC105923|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC105924|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC107591|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC107812|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##D63485|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AK093798|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AK310737|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AY660028|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_001193321|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_001193322|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_014002|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AK289861|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AK291268|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY062002|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY062003|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC004270|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC007203|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##NM_182663|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##NM_182664|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AB209145|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##DQ892961|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##DQ896208|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##NM_182665|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AF445801|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5	0.99589	CTCF.p2:-2:0.996
chr1	58981605	58981752	reg1007453.p1	12.656	+	TSC_hg19_v1_chr1_-_58716210 AK095513 NM_021080	-265469	-	TSC_hg19_v1_chr1_-_58716179 CR933698 AB210012	-265496	-	TSC_hg19_v1_chr1_-_57888785 AK313144	-1092850	-	TSC_hg19_v1_chr1_-_59012387 AF263547 NM_145243 AB048348 BC012915 AK308847	30745	-	BT007255 CR542260 DQ892601 DQ895835 X13425 BC009409 TSC_hg19_v1_chr1_-_59042925	61199	-	NM_002353	61487	-	AK095513|DAB1|1600|disabled homolog 1 (Drosophila)##NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)##CR933698|DAB1|1600|disabled homolog 1 (Drosophila)##AB210012|DAB1|1600|disabled homolog 1 (Drosophila)##AK313144|DAB1|1600|disabled homolog 1 (Drosophila)##NM_145243|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AB048348|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BC012915|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AK308847|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BT007255|TACSTD2|4070|tumor-associated calcium signal transducer 2##CR542260|TACSTD2|4070|tumor-associated calcium signal transducer 2##DQ892601|TACSTD2|4070|tumor-associated calcium signal transducer 2##DQ895835|TACSTD2|4070|tumor-associated calcium signal transducer 2##X13425|TACSTD2|4070|tumor-associated calcium signal transducer 2##BC009409|TACSTD2|4070|tumor-associated calcium signal transducer 2##NM_002353|TACSTD2|4070|tumor-associated calcium signal transducer 2	0.479028	CTCF.p2:-13:0.479
chr14	92923128	92923278	reg1006887.p1	12.655	+	NM_153646 AF520704 AF520705 BC069653	-133027	+	AK295059 NM_153647	-133667	+	AF520706 NM_153648	-134279	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	56756	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	195433	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	195620	+	NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520706|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153648|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3	0.880303	CTCF.p2:25:0.880
chr19	6632155	6632294	reg1005227.p2	12.655	+	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	-41066	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	-41118	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	-41192	-	TSC_hg19_v1_chr19_-_6670094 CR541854 CR541871 AB528780 AF036581 AY028261 AY358812 BC018058 AK292037	37900	-	AF064090 NM_003807 NM_172014	38374	-	TSC_hg19_v1_chr19_-_6720662 BC063852 BC150179 BC150200 K02765 AK304071 BC150299 NM_000064 AK299114	88432	-	S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##BT007211|CD70|970|CD70 molecule##CR541854|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541871|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF036581|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY028261|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY358812|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC018058|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AK292037|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF064090|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_003807|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_172014|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC063852|C3|718|complement component 3##BC150179|C3|718|complement component 3##BC150200|C3|718|complement component 3##K02765|C3|718|complement component 3##AK304071|C3|718|complement component 3##BC150299|C3|718|complement component 3##NM_000064|C3|718|complement component 3	0.979558	CTCF.p2:-1:0.980
chr5	147754426	147754546	reg1006844.p1	12.655	+	AY396740 NM_001040433 BC137530 BC137531	-39351	+	AK311570 AF268198 NM_032566 AY359072 BC109385 BC110067	-62479	+	EF108324 EF426754 BC128163 BC128164 NM_001040129	-106088	+	AK054753 TSC_hg19_v1_chr5_-_147763424	8898	-	TSC_hg19_v1_chr5_+_147763553 NM_030793 NM_205836 AK308414	9063	+	TSC_hg19_v1_chr5_+_147763577 BC033454 AK024024	9091	+	AY396740|SPINK9|643394|serine peptidase inhibitor, Kazal type 9##NM_001040433|SPINK9|643394|serine peptidase inhibitor, Kazal type 9##BC137530|SPINK9|643394|serine peptidase inhibitor, Kazal type 9##BC137531|SPINK9|643394|serine peptidase inhibitor, Kazal type 9##AF268198|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##NM_032566|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##AY359072|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##BC109385|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##BC110067|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##NM_030793|FBXO38|81545|F-box protein 38##NM_205836|FBXO38|81545|F-box protein 38##AK308414|FBXO38|81545|F-box protein 38##BC033454|FBXO38|81545|F-box protein 38##AK024024|FBXO38|81545|F-box protein 38	0.515252	CTCF.p2:19:0.515
chr16	4556537	4556646	reg1005618.p1	12.654	+	AK093388 NM_001127205	-10733	+	NM_001127204 NM_002134 AK313660 TSC_hg19_v1_chr16_+_4526411 BC002396 S34389 AK222629	-30188	+	AF225419 NM_020677	-31696	-	AK311295 BC007604 TSC_hg19_v1_chr16_-_4563123	6460	-	TSC_hg19_v1_chr16_-_4588442 AF195661 AL833853 NM_001199054	31846	-	TSC_hg19_v1_chr16_-_4588775 BC002882 AK292036 AK302297 AL136698 AK294257 DQ167023 NM_001199055 NM_001199056 NM_013399 AK307067 AK308532	32201	-	AK093388|HMOX2|3163|heme oxygenase (decycling) 2##NM_001127205|HMOX2|3163|heme oxygenase (decycling) 2##NM_001127204|HMOX2|3163|heme oxygenase (decycling) 2##NM_002134|HMOX2|3163|heme oxygenase (decycling) 2##AK313660|HMOX2|3163|heme oxygenase (decycling) 2##BC002396|HMOX2|3163|heme oxygenase (decycling) 2##S34389|HMOX2|3163|heme oxygenase (decycling) 2##AK222629|HMOX2|3163|heme oxygenase (decycling) 2##AF225419|NMRAL1|57407|NmrA-like family domain containing 1##NM_020677|NMRAL1|57407|NmrA-like family domain containing 1##AK311295|C16orf5|29965|chromosome 16 open reading frame 5##BC007604|C16orf5|29965|chromosome 16 open reading frame 5##AF195661|C16orf5|29965|chromosome 16 open reading frame 5##AL833853|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199054|C16orf5|29965|chromosome 16 open reading frame 5##BC002882|C16orf5|29965|chromosome 16 open reading frame 5##AK292036|C16orf5|29965|chromosome 16 open reading frame 5##AK302297|C16orf5|29965|chromosome 16 open reading frame 5##AL136698|C16orf5|29965|chromosome 16 open reading frame 5##AK294257|C16orf5|29965|chromosome 16 open reading frame 5##DQ167023|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199055|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199056|C16orf5|29965|chromosome 16 open reading frame 5##NM_013399|C16orf5|29965|chromosome 16 open reading frame 5##AK307067|C16orf5|29965|chromosome 16 open reading frame 5##AK308532|C16orf5|29965|chromosome 16 open reading frame 5	0.763328	CTCF.p2:-10:0.763
chr17	25926993	25927095	reg1004231.p1	12.654	+	BC035488 BC042106 NM_014238	-128015	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-305763	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-305922	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	31124	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	31159	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	31184	+	BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.996127	CTCF.p2:24:0.996
chr21	36117922	36118043	reg1004367.p1	12.654	+	AF448438 AF448439 NM_053277	-76295	+	BT007363 CU678256 AF303449 U85266 TSC_hg19_v1_chr21_-_35987486 BC002864 AK092184 AX747397 NM_004414 AY325903	-130636	-	NM_203417 U85265	-131238	-	S76350 GU070939 TSC_hg19_v1_chr21_-_36231874	113854	-	S76345 S76346 GU070941 TSC_hg19_v1_chr21_-_36252995	134954	-	TSC_hg19_v1_chr21_-_36259250 EU093088	141290	-	AF448438|CLIC6|54102|chloride intracellular channel 6##AF448439|CLIC6|54102|chloride intracellular channel 6##NM_053277|CLIC6|54102|chloride intracellular channel 6##BT007363|RCAN1|1827|regulator of calcineurin 1##AF303449|RCAN1|1827|regulator of calcineurin 1##U85266|RCAN1|1827|regulator of calcineurin 1##BC002864|RCAN1|1827|regulator of calcineurin 1##AK092184|RCAN1|1827|regulator of calcineurin 1##NM_004414|RCAN1|1827|regulator of calcineurin 1##AY325903|RCAN1|1827|regulator of calcineurin 1##NM_203417|RCAN1|1827|regulator of calcineurin 1##U85265|RCAN1|1827|regulator of calcineurin 1##S76350|RUNX1|861|runt-related transcription factor 1##S76345|RUNX1|861|runt-related transcription factor 1##S76346|RUNX1|861|runt-related transcription factor 1	0.079239	
chr10	122702472	122702587	reg1007031.p1	12.653	+	TSC_hg19_v1_chr10_+_122610873 BC040469 AB037772 AK299524 AF320223 AK301761 BC071564 AK315145 AB385454	-91634	+	NM_018117 TSC_hg19_v1_chr10_+_122610771	-91801	+	NM_001030059 TSC_hg19_v1_chr10_+_122216486 BC101267 BC101268 BC101269 BC122535 BC132787 AK296273 HQ258170 AK310178	-485890	+	AB084153 EF057068 EU826598 EU826599 EU826600 EU826601 AB587574 M55614 Z71929 X56191 NM_001144913 NM_001144914	650876	-	AK308621 NM_001144916	651242	-	AK294026 NM_001144915	653629	-	BC040469|WDR11|55717|WD repeat domain 11##AB037772|WDR11|55717|WD repeat domain 11##AK299524|WDR11|55717|WD repeat domain 11##AF320223|WDR11|55717|WD repeat domain 11##AK301761|WDR11|55717|WD repeat domain 11##BC071564|WDR11|55717|WD repeat domain 11##AK315145|WDR11|55717|WD repeat domain 11##NM_018117|WDR11|55717|WD repeat domain 11##NM_001030059|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101267|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101268|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101269|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC122535|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC132787|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##HQ258170|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AK310178|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AB084153|FGFR2|2263|fibroblast growth factor receptor 2##EF057068|FGFR2|2263|fibroblast growth factor receptor 2##EU826598|FGFR2|2263|fibroblast growth factor receptor 2##EU826599|FGFR2|2263|fibroblast growth factor receptor 2##EU826600|FGFR2|2263|fibroblast growth factor receptor 2##EU826601|FGFR2|2263|fibroblast growth factor receptor 2##M55614|FGFR2|2263|fibroblast growth factor receptor 2##Z71929|FGFR2|2263|fibroblast growth factor receptor 2##X56191|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144913|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144914|FGFR2|2263|fibroblast growth factor receptor 2##AK308621|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144916|FGFR2|2263|fibroblast growth factor receptor 2##AK294026|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2	0.970838	CTCF.p2:-8:0.971
chr1	157460501	157460612	reg1005780.p1	12.653	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-352273	-	TSC_hg19_v1_chr1_-_157108158 L16464	-352406	-	AK131392 NM_001004341	-390957	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	61674	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	107245	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	209971	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.974225	CTCF.p2:9:0.974
chr13	74614470	74614611	reg1007196.p1	12.653	+	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-981336	+	TSC_hg19_v1_chr13_+_73356270 NM_006346 AK309828 BC006009 BC008432 BC041806 BC051911 AY370776 AY375528	-1258230	+	BC056143 TSC_hg19_v1_chr13_-_73356083 AK314715 BC038101 NM_001128226 NM_014953	-1258334	-	AF161471 AF113122 NM_007249	93449	-	TSC_hg19_v1_chr13_-_74708425 AK291397	93856	-	CR749622 TSC_hg19_v1_chr13_-_75901948	1287382	-	AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_006346|PIBF1|10464|progesterone immunomodulatory binding factor 1##AK309828|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC006009|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC008432|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC041806|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC051911|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY370776|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY375528|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC056143|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AK314715|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##BC038101|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_001128226|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_014953|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK291397|KLF12|11278|Kruppel-like factor 12##CR749622|TBC1D4|9882|TBC1 domain family, member 4	0.0	
chr2	68519413	68519511	reg1004553.p2	12.652	+	TSC_hg19_v1_chr2_-_68479665 AK307136 AK314893 BC027913 NM_000945	-39867	-	TSC_hg19_v1_chr2_+_68384999 BC008304 NM_020143 AK291715 AF349314 AF164799 AK313204 AK223118 L48692 AK225641 BC018152	-134365	+	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	-134828	-	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	27638	-	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	72910	+	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	72995	+	AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC008304|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_020143|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK291715|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF349314|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF164799|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK313204|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK223118|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK225641|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##BC018152|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin##DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin	0.022458	
chr5	135398383	135398503	reg1005456.p2	12.652	+	TSC_hg19_v1_chr5_+_135364731 AB590111 DQ892178 EU176690 CU678832 BT009820	-33709	+	NM_000358 TSC_hg19_v1_chr5_+_135364679 AK094581 AK094055 AK222833 AK298603 AK093916 AK303643 BC026352 BC000097 BC004972 M77349	-33799	+	AB590696 BC093670 BC101579 AK314092 D63521 NM_002302	-107822	-	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	70086	+	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	70141	+	NM_001167576 NM_001167577 NM_020389	302720	-	DQ892178|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##EU176690|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BT009820|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##NM_000358|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK094581|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK094055|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK222833|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK298603|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK093916|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK303643|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC026352|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC000097|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC004972|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##M77349|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC093670|LECT2|3950|leukocyte cell-derived chemotaxin 2##BC101579|LECT2|3950|leukocyte cell-derived chemotaxin 2##AK314092|LECT2|3950|leukocyte cell-derived chemotaxin 2##D63521|LECT2|3950|leukocyte cell-derived chemotaxin 2##NM_002302|LECT2|3950|leukocyte cell-derived chemotaxin 2##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7	0.863474	CTCF.p2:9:0.863
chr7	114857552	114857687	reg1015669.p2	12.651	+	BC040713 TSC_hg19_v1_chr7_+_114562979 AY196485	-294663	+	TSC_hg19_v1_chr7_+_114562148 AF054589 NM_001166345 NM_001166346 NM_199072	-295445	+	AF467253 NM_001172767 NM_148899 U80741 AF467258 AF467259 TSC_hg19_v1_chr7_+_114066703	-790989	+	AJ608795 NM_001244583	750747	-	TSC_hg19_v1_chr7_-_115670796 D43945 BC029891	813167	-	TSC_hg19_v1_chr7_-_115670820 AK313546	813199	-	BC040713|MDFIC|29969|MyoD family inhibitor domain containing##AY196485|MDFIC|29969|MyoD family inhibitor domain containing##AF054589|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166345|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166346|MDFIC|29969|MyoD family inhibitor domain containing##NM_199072|MDFIC|29969|MyoD family inhibitor domain containing##AF467253|FOXP2|93986|forkhead box P2##NM_001172767|FOXP2|93986|forkhead box P2##NM_148899|FOXP2|93986|forkhead box P2##AF467258|FOXP2|93986|forkhead box P2##AF467259|FOXP2|93986|forkhead box P2##AJ608795|TFEC|22797|transcription factor EC##NM_001244583|TFEC|22797|transcription factor EC##D43945|TFEC|22797|transcription factor EC##BC029891|TFEC|22797|transcription factor EC##AK313546|TFEC|22797|transcription factor EC	0.568577	CTCF.p2:-6:0.569
chr8	81161937	81162079	reg1006651.p1	12.649	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-78238	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-168979	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	-219506	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	236476	+	AK131274 NM_001033723	625007	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	862306	-	BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1	0.749669	CTCF.p2:-71:0.583
chr11	36287695	36287829	reg1007737.p1	12.648	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	-322151	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-603089	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-603312	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	23191	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	23224	-	NM_001160167 AK055042	30018	+	BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9##NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like	0.996142	CTCF.p2:-3:0.996
chr18	5879539	5879661	reg1004444.p1	12.648	+	TSC_hg19_v1_chr18_-_5630663 BC008377	-248953	-	AF069072 AB023204 NM_012307 TSC_hg19_v1_chr18_-_5543997 AK128531	-335612	-	NM_001243704	-582549	-	NM_001080209	12502	-	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	535315	-	NM_001243517	631814	+	BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AF069072|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AB023204|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_012307|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AK128531|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_001243704|ZFP161|7541|zinc finger protein 161 homolog (mouse)##NM_001080209|TMEM200C|645369|transmembrane protein 200C##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480	0.185771	
chr9	137256311	137256444	reg1005734.p2	12.648	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-37977	+	TSC_hg19_v1_chr9_+_137218317 BC063827 NM_002957	-38062	+	AJ011376 NM_052821 AB464354	-251423	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	277270	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	277433	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	516283	+	BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##BC063827|RXRA|6256|retinoid X receptor, alpha##NM_002957|RXRA|6256|retinoid X receptor, alpha##AJ011376|WDR5|11091|WD repeat domain 5##NM_052821|WDR5|11091|WD repeat domain 5##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##D90279|COL5A1|1289|collagen, type V, alpha 1##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	0.996685	CTCF.p2:-21:0.997
chr12	47377900	47378009	reg1006762.p1	12.647	+	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	-158198	-	TSC_hg19_v1_chr12_-_46766619 NM_018976	-611351	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-611665	-	TSC_hg19_v1_chr12_+_47473404 BC072670	95443	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	95629	-	BC008360 NM_138371	232097	+	AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC008360|FAM113B|91523|family with sequence similarity 113, member B##NM_138371|FAM113B|91523|family with sequence similarity 113, member B	0.51023	CTCF.p2:-3:0.510
chr2	176554990	176555108	reg1006905.p1	12.646	+	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	-508745	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	-522154	-	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	-685036	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	311926	-	NM_001080458	393640	-	TSC_hg19_v1_chr2_+_176957451 NM_000523 AB463753	402495	+	CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715##NM_001080458|EVX2|344191|even-skipped homeobox 2##NM_000523|HOXD13|3239|homeobox D13	0.990645	CTCF.p2:-9:0.991
chr3	185695348	185695448	reg1005679.p2	12.646	+	TSC_hg19_v1_chr3_-_185655843 AK315632 NM_001243879 NM_004593	-39520	-	TSC_hg19_v1_chr3_-_185655809 AK098191	-39583	-	TSC_hg19_v1_chr3_-_185655803 BC000451 BC000160 U87836 AK308267	-39608	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	130948	-	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	131458	-	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	384536	-	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC000451|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC000160|TRA2B|6434|transformer 2 beta homolog (Drosophila)##U87836|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK308267|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa	0.999421	CTCF.p2:-6:0.999
chr22	30787218	30787325	reg1005733.p1	12.644	+	NM_001017981 AB464176	-3969	-	TSC_hg19_v1_chr22_-_30752884 BC007684 AK303273 NM_001005409 NM_005877	-34335	-	TSC_hg19_v1_chr22_-_30752874 AB463284 CU013174 CU013462 DQ892687 DQ895931 BC001976 X85237 CR456575	-34459	-	NM_001204204 NM_012429 NM_033382 AL096881 TSC_hg19_v1_chr22_+_30793006 AK223587 BC048337 AK314390 AK091402 BC058915 AB033012 CR456571 AK303751 AK296540 CU013170 CU013458	5744	+	NM_001003704 NM_016498 AF151076 AF060924 BC030989 AK026104 BC009300 TSC_hg19_v1_chr22_+_30821776 BC001608 BC014446 CR456345 BC046132 AB528187 CU013056 CU013344	34468	+	AY158086 BC069641 BC101001 BC101002 BC101003 BC101004 AK298079 AK131358 AY240872 NM_174975	80717	-	NM_001017981|RNF215|200312|ring finger protein 215##BC007684|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##AK303273|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##NM_001005409|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##NM_005877|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CU013174|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CU013462|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##DQ892687|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##DQ895931|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##BC001976|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##X85237|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CR456575|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##NM_001204204|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_012429|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_033382|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AL096881|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK223587|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##BC048337|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK314390|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK091402|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##BC058915|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AB033012|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CR456571|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK303751|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK296540|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CU013170|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CU013458|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_001003704|MTFP1|51537|mitochondrial fission process 1##NM_016498|MTFP1|51537|mitochondrial fission process 1##AF151076|MTFP1|51537|mitochondrial fission process 1##AF060924|MTFP1|51537|mitochondrial fission process 1##BC030989|MTFP1|51537|mitochondrial fission process 1##AK026104|MTFP1|51537|mitochondrial fission process 1##BC009300|MTFP1|51537|mitochondrial fission process 1##BC001608|MTFP1|51537|mitochondrial fission process 1##BC014446|MTFP1|51537|mitochondrial fission process 1##CR456345|MTFP1|51537|mitochondrial fission process 1##BC046132|MTFP1|51537|mitochondrial fission process 1##AY158086|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC069641|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101001|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101002|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101003|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101004|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AK298079|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AK131358|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AY240872|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##NM_174975|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	0.990278	CTCF.p2:-8:0.990
chr15	81693107	81693231	reg1006419.p1	12.643	+	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	-26684	-	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	-76675	-	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	-103865	+	AK094145 TSC_hg19_v1_chr15_-_82336883	643714	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	645197	-	AB095929 BC111545 BC036211 TSC_hg19_v1_chr15_-_82338485	645307	-	NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3##AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)##AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)##BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)##BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)	0.391837	CTCF.p2:14:0.392
chr19	16494184	16494305	reg1004896.p2	12.643	+	AF134053 TSC_hg19_v1_chr19_+_16435803	-58475	+	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	-58603	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	-185494	+	BC142662 AB527825 AF110265 BC131590 BC037558 TSC_hg19_v1_chr19_-_16582771 AB015346 NM_021235 BC067114 BC051873 BC142716 AK296473 AK297428 AK024166	88532	-	TSC_hg19_v1_chr19_-_16582810 AK291359	88608	-	CU677059 AB576176 DQ890903 DQ894056 AK058084 BC014595 NM_145046	112726	-	AF134053|KLF2|10365|Kruppel-like factor 2 (lung)##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)##AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC142662|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AF110265|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC131590|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC037558|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB015346|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##NM_021235|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC067114|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC051873|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC142716|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK296473|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK297428|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK024166|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK291359|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB576176|CALR3|125972|calreticulin 3##DQ890903|CALR3|125972|calreticulin 3##DQ894056|CALR3|125972|calreticulin 3##AK058084|CALR3|125972|calreticulin 3##BC014595|CALR3|125972|calreticulin 3##NM_145046|CALR3|125972|calreticulin 3	0.872824	CTCF.p2:15:0.873
chr2	158354251	158354363	reg1004361.p1	12.643	+	L06633 AB528875 CU690346 AF068836 BC036449 TSC_hg19_v1_chr2_-_158300602 AK312753 NM_004288	-53743	-	NM_001009959 AK296477	-170151	-	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	-172023	-	TSC_hg19_v1_chr2_-_158454049 AF525679 NM_001111031	99768	-	AB590288 CU692676 DQ895570 EU176205 AF525680 AF525681 AY127050 TSC_hg19_v1_chr2_-_158485239	130891	-	BC022530 NM_001111032 NM_001111033 NM_145259 TSC_hg19_v1_chr2_-_158485400	131090	-	L06633|CYTIP|9595|cytohesin 1 interacting protein##AF068836|CYTIP|9595|cytohesin 1 interacting protein##BC036449|CYTIP|9595|cytohesin 1 interacting protein##AK312753|CYTIP|9595|cytohesin 1 interacting protein##NM_004288|CYTIP|9595|cytohesin 1 interacting protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##AF525679|ACVR1C|130399|activin A receptor, type IC##NM_001111031|ACVR1C|130399|activin A receptor, type IC##DQ895570|ACVR1C|130399|activin A receptor, type IC##EU176205|ACVR1C|130399|activin A receptor, type IC##AF525680|ACVR1C|130399|activin A receptor, type IC##AF525681|ACVR1C|130399|activin A receptor, type IC##AY127050|ACVR1C|130399|activin A receptor, type IC##BC022530|ACVR1C|130399|activin A receptor, type IC##NM_001111032|ACVR1C|130399|activin A receptor, type IC##NM_001111033|ACVR1C|130399|activin A receptor, type IC##NM_145259|ACVR1C|130399|activin A receptor, type IC	0.0	
chr2	38342494	38342629	reg1005750.p1	12.643	+	TSC_hg19_v1_chr2_-_38303315 AK312686 NM_000104	-39241	-	U03688 BC012049 TSC_hg19_v1_chr2_-_38303294 AK297039 AK303862	-39279	-	NM_001170793 NM_144713 AK057516 AF435956	-164961	+	AK316179 TSC_hg19_v1_chr2_-_38525609	183008	-	TSC_hg19_v1_chr2_-_38604411 BC053508 AK026946 AK225190 AK303985 AK308894	261843	-	TSC_hg19_v1_chr2_-_38604430 NM_001135673 NM_022374	261870	-	AK312686|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_000104|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##U03688|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##BC012049|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK303862|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1##AK316179|ATL2|64225|atlastin GTPase 2##BC053508|ATL2|64225|atlastin GTPase 2##AK026946|ATL2|64225|atlastin GTPase 2##AK225190|ATL2|64225|atlastin GTPase 2##AK303985|ATL2|64225|atlastin GTPase 2##AK308894|ATL2|64225|atlastin GTPase 2##NM_001135673|ATL2|64225|atlastin GTPase 2##NM_022374|ATL2|64225|atlastin GTPase 2	0.012828	
chr8	49838271	49838413	reg1006344.p1	12.643	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-4432	-	AK021829 BC025676 BC029586 AK316037 AK299659 AK307101 NM_001142857 NM_024593	-190549	-	TSC_hg19_v1_chr8_+_48920990 BC016332 BC016710 BC007051 AK313447 U62136 AF049140 BC028673 BC062418 NM_003350	-917361	+	NM_001007176 BC017981 AJ276240	146567	+	AJ003030 NM_018967	986254	+	EU170240 AY877349 NM_144651	2883611	-	EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##AK021829|EFCAB1|79645|EF-hand calcium binding domain 1##BC025676|EFCAB1|79645|EF-hand calcium binding domain 1##BC029586|EFCAB1|79645|EF-hand calcium binding domain 1##AK316037|EFCAB1|79645|EF-hand calcium binding domain 1##AK299659|EFCAB1|79645|EF-hand calcium binding domain 1##AK307101|EFCAB1|79645|EF-hand calcium binding domain 1##NM_001142857|EFCAB1|79645|EF-hand calcium binding domain 1##NM_024593|EFCAB1|79645|EF-hand calcium binding domain 1##BC016332|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC016710|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC007051|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AK313447|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##U62136|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AF049140|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC028673|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC062418|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##NM_003350|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like	0.996623	CTCF.p2:18:0.997
chr16	66642561	66642695	reg1006734.p1	12.642	+	TSC_hg19_v1_chr16_+_66638658 BC023509 BC023591	-3948	+	TSC_hg19_v1_chr16_+_66638636 AY166714	-3987	+	TSC_hg19_v1_chr16_+_66638606 BC047701 NM_181553 BC036042 BC040227	-4054	+	TSC_hg19_v1_chr16_-_66730647 BC093679 AF479814 AF521889 AF521890 NM_178818 NM_181521	88004	-	TSC_hg19_v1_chr16_-_66785505 AK304233 AF035812 BC025959 AK291766 AK303031 BX648863	142864	-	BC010928 TSC_hg19_v1_chr16_-_66785513 AK295049 NM_006141	142934	-	BC023509|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC023591|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC047701|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##NM_181553|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC036042|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC040227|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC093679|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF479814|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521889|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521890|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_178818|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_181521|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AK304233|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AF035812|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC025959|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK291766|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK303031|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BX648863|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC010928|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK295049|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##NM_006141|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2	1.014808	CTCF.p2:-6:1.000
chr19	46146489	46146604	reg1005154.p4	12.642	+	NM_001242348 BC007358	-1620	+	TSC_hg19_v1_chr19_-_46142667 AF103939 NM_012155	-3872	-	AL096717 TSC_hg19_v1_chr19_-_46142656 BC032630 AK026616 AK308403 AK304299 AK225043	-3895	-	AK295905 NM_001193269	438	-	AK308580 AK296258 AK294668 NM_001193268 BC029304	2177	-	NM_000164 U39231 BC093723 BC101673 BC143300 BC143302 S79852	24961	+	NM_001242348|LOC100287177|100287177|uncharacterized LOC100287177##BC007358|LOC100287177|100287177|uncharacterized LOC100287177##AF103939|EML2|24139|echinoderm microtubule associated protein like 2##NM_012155|EML2|24139|echinoderm microtubule associated protein like 2##AL096717|EML2|24139|echinoderm microtubule associated protein like 2##BC032630|EML2|24139|echinoderm microtubule associated protein like 2##AK026616|EML2|24139|echinoderm microtubule associated protein like 2##AK308403|EML2|24139|echinoderm microtubule associated protein like 2##AK304299|EML2|24139|echinoderm microtubule associated protein like 2##AK225043|EML2|24139|echinoderm microtubule associated protein like 2##AK295905|EML2|24139|echinoderm microtubule associated protein like 2##NM_001193269|EML2|24139|echinoderm microtubule associated protein like 2##AK296258|EML2|24139|echinoderm microtubule associated protein like 2##AK294668|EML2|24139|echinoderm microtubule associated protein like 2##NM_001193268|EML2|24139|echinoderm microtubule associated protein like 2##BC029304|EML2|24139|echinoderm microtubule associated protein like 2##NM_000164|GIPR|2696|gastric inhibitory polypeptide receptor##U39231|GIPR|2696|gastric inhibitory polypeptide receptor##BC093723|GIPR|2696|gastric inhibitory polypeptide receptor##BC101673|GIPR|2696|gastric inhibitory polypeptide receptor##BC143300|GIPR|2696|gastric inhibitory polypeptide receptor##BC143302|GIPR|2696|gastric inhibitory polypeptide receptor##S79852|GIPR|2696|gastric inhibitory polypeptide receptor	0.614831	CTCF.p2:4:0.615
chr3	186882972	186883110	reg1007320.p1	12.641	+	TSC_hg19_v1_chr3_-_186857285 L05096 AB063610 BC012328 NM_052969	-25785	-	AK292879 BC040009 NM_003032 X62822 BC031476 L11720 X54363	-143369	+	U67847 TSC_hg19_v1_chr3_+_186714361	-168693	+	BC065202 NM_153708 BC034744 DQ890807 DQ893962 AY562235	32301	+	BC106945 BC106946 TSC_hg19_v1_chr3_-_187009489 AK291686 AK129893 AK304334 AK300663 BX647237 AK291157 CR749615 BC039724 NM_001031849 NM_001879 NM_139125	126598	-	BC013161 NM_022147 AJ251832 AY562238 DQ891046 DQ894225	203157	+	L05096|RPL39L|116832|ribosomal protein L39-like##AB063610|RPL39L|116832|ribosomal protein L39-like##BC012328|RPL39L|116832|ribosomal protein L39-like##NM_052969|RPL39L|116832|ribosomal protein L39-like##AK292879|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC040009|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_003032|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X62822|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC031476|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##L11720|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X54363|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1##NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1##BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1##AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1##BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC013161|RTP4|64108|receptor (chemosensory) transporter protein 4##NM_022147|RTP4|64108|receptor (chemosensory) transporter protein 4##AJ251832|RTP4|64108|receptor (chemosensory) transporter protein 4##AY562238|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ891046|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ894225|RTP4|64108|receptor (chemosensory) transporter protein 4	0.96345	CTCF.p2:2:0.963
chr12	94373113	94373218	reg1005237.p2	12.640	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-301982	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-407564	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-408345	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	169339	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	480366	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	480477	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.822056	CTCF.p2:5:0.822
chr6	26607736	26607870	reg1007330.p1	12.639	+	TSC_hg19_v1_chr6_+_26597203 NM_013375 BC066313 BC048812 AB027258 AB463399 CU688138 CU690582 EU446795	-10596	+	TSC_hg19_v1_chr6_+_26538630 NM_006353 AK311841 BC001282	-69173	+	U39576 BC096312 BC096313 BC096314 BC096315 NM_001732	-106332	+	TSC_hg19_v1_chr6_-_26659967 NM_001242797 NM_001242798 NM_001242799 NM_024639	52149	-	AB591038 BC014312 TSC_hg19_v1_chr6_-_27100575 NM_021058 AK311849	492762	-	TSC_hg19_v1_chr6_+_27100821 AK312124 NM_021064 L19778 BC067782 BC016677 AB590259 DQ891024 DQ894204 DQ894286	493014	+	NM_013375|ABT1|29777|activator of basal transcription 1##BC066313|ABT1|29777|activator of basal transcription 1##BC048812|ABT1|29777|activator of basal transcription 1##AB027258|ABT1|29777|activator of basal transcription 1##EU446795|ABT1|29777|activator of basal transcription 1##NM_006353|HMGN4|10473|high mobility group nucleosomal binding domain 4##AK311841|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC001282|HMGN4|10473|high mobility group nucleosomal binding domain 4##U39576|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096312|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096313|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096314|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096315|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001732|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001242797|ZNF322|79692|zinc finger protein 322##NM_001242798|ZNF322|79692|zinc finger protein 322##NM_001242799|ZNF322|79692|zinc finger protein 322##NM_024639|ZNF322|79692|zinc finger protein 322##BC014312|HIST1H2BJ|8970|histone cluster 1, H2bj##NM_021058|HIST1H2BJ|8970|histone cluster 1, H2bj##AK311849|HIST1H2BJ|8970|histone cluster 1, H2bj##AK312124|HIST1H2AG|8969|histone cluster 1, H2ag##NM_021064|HIST1H2AG|8969|histone cluster 1, H2ag##L19778|HIST1H2AG|8969|histone cluster 1, H2ag##BC067782|HIST1H2AG|8969|histone cluster 1, H2ag##BC016677|HIST1H2AG|8969|histone cluster 1, H2ag##DQ891024|HIST1H2AG|8969|histone cluster 1, H2ag##DQ894204|HIST1H2AG|8969|histone cluster 1, H2ag##DQ894286|HIST1H2AG|8969|histone cluster 1, H2ag	0.587686	CTCF.p2:-14:0.588
chr13	37310384	37310519	reg1005126.p1	12.638	+	BC036540 NM_203451 AK294236	-62349	+	TSC_hg19_v1_chr13_+_37006631 AK225146 U66838 BC035479 BC036346 AB462995 AM393372 BT019577 DQ891303 DQ894488	-303758	+	AK314261 NM_001111045 NM_003914	-304043	+	TSC_hg19_v1_chr13_+_37393356 NM_000538 AK313912 BC026088 DQ891169 DQ893581 DQ894352	82948	+	TSC_hg19_v1_chr13_-_37494376 BC067766 NM_001127217 NM_005905	183938	-	CU680348 TSC_hg19_v1_chr13_-_37573465 AF161498 BC012531 AF183413 AK299126	263002	-	BC036540|SERTM1|400120|serine-rich and transmembrane domain containing 1##NM_203451|SERTM1|400120|serine-rich and transmembrane domain containing 1##AK294236|SERTM1|400120|serine-rich and transmembrane domain containing 1##AK225146|CCNA1|8900|cyclin A1##U66838|CCNA1|8900|cyclin A1##BC035479|CCNA1|8900|cyclin A1##BC036346|CCNA1|8900|cyclin A1##AM393372|CCNA1|8900|cyclin A1##BT019577|CCNA1|8900|cyclin A1##DQ891303|CCNA1|8900|cyclin A1##DQ894488|CCNA1|8900|cyclin A1##AK314261|CCNA1|8900|cyclin A1##NM_001111045|CCNA1|8900|cyclin A1##NM_003914|CCNA1|8900|cyclin A1##NM_000538|RFXAP|5994|regulatory factor X-associated protein##AK313912|RFXAP|5994|regulatory factor X-associated protein##BC026088|RFXAP|5994|regulatory factor X-associated protein##DQ891169|RFXAP|5994|regulatory factor X-associated protein##DQ893581|RFXAP|5994|regulatory factor X-associated protein##DQ894352|RFXAP|5994|regulatory factor X-associated protein##BC067766|SMAD9|4093|SMAD family member 9##NM_001127217|SMAD9|4093|SMAD family member 9##NM_005905|SMAD9|4093|SMAD family member 9##AF161498|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##BC012531|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##AF183413|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##AK299126|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)	0.91515	CTCF.p2:11:0.915
chrX	40653415	40653548	reg1005224.p1	12.638	+	TSC_hg19_v1_chrX_-_40595139 AK308871	-58352	-	TSC_hg19_v1_chrX_-_40594999 AK293070	-58501	-	TSC_hg19_v1_chrX_-_40594795 AB006651 AF304448 BC098377 NM_004229	-58693	-	TSC_hg19_v1_chrX_+_40944880 NM_001039590 NM_001039591	291391	+	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	539169	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	539976	+	AK308871|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14##AB006651|MED14|9282|mediator complex subunit 14##AF304448|MED14|9282|mediator complex subunit 14##BC098377|MED14|9282|mediator complex subunit 14##NM_004229|MED14|9282|mediator complex subunit 14##NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked##NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	0.975197	CTCF.p2:-8:0.975
chr2	96079887	96079998	reg1006076.p1	12.637	+	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	-11463	+	DQ148486 NM_001034914	-67175	+	TSC_hg19_v1_chr2_+_95963054 NM_013434 AB209076 AJ131730 AK095539 AK315437 BC012850 AF120102 AB528387 AF199599 AF367022 BT020075 CU680412 DQ148485 DQ892078 DQ895271 DQ895316	-116836	+	NM_001164464	70536	-	BC015353 NM_138800	177823	+	TSC_hg19_v1_chr2_-_96482383 BC117383 BC126153 AK057596	402503	-	AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##DQ148486|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_001034914|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_013434|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AJ131730|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK095539|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK315437|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC012850|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF120102|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF199599|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF367022|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BT020075|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ148485|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ892078|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895271|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895316|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_001164464|TRIM43B|653192|tripartite motif containing 43B##BC015353|TRIM43|129868|tripartite motif containing 43##NM_138800|TRIM43|129868|tripartite motif containing 43##AK057596|LINC00342|150759|long intergenic non-protein coding RNA 342	0.997443	CTCF.p2:-11:0.997
chr5	179720588	179720737	reg1007348.p1	12.637	+	TSC_hg19_v1_chr5_-_179719061 NM_001135044 NM_002752 NM_139068 NM_139069 NM_139070	-1586	-	TSC_hg19_v1_chr5_-_179718968 AK289638	-1695	-	TSC_hg19_v1_chr5_-_179636160 NM_175062 BC036802	-84486	-	AB016789 NM_005110 BC000012 TSC_hg19_v1_chr5_-_179780333 AK022507 AK314551	59663	-	TSC_hg19_v1_chr5_+_179921385 NM_015455	200731	+	TSC_hg19_v1_chr5_+_179921452 AB033020 BC152469	200796	+	NM_001135044|MAPK9|5601|mitogen-activated protein kinase 9##NM_002752|MAPK9|5601|mitogen-activated protein kinase 9##NM_139068|MAPK9|5601|mitogen-activated protein kinase 9##NM_139069|MAPK9|5601|mitogen-activated protein kinase 9##NM_139070|MAPK9|5601|mitogen-activated protein kinase 9##AK289638|MAPK9|5601|mitogen-activated protein kinase 9##NM_175062|RASGEF1C|255426|RasGEF domain family, member 1C##BC036802|RASGEF1C|255426|RasGEF domain family, member 1C##AB016789|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##NM_005110|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##BC000012|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##AK022507|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##AK314551|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##NM_015455|CNOT6|57472|CCR4-NOT transcription complex, subunit 6##AB033020|CNOT6|57472|CCR4-NOT transcription complex, subunit 6##BC152469|CNOT6|57472|CCR4-NOT transcription complex, subunit 6	0.846877	CTCF.p2:27:0.812
chr9	124162521	124162656	reg1007288.p1	12.637	+	BC010703 TSC_hg19_v1_chr9_-_124132529 AK307999 AK304449 AK304518 AK302977 NM_004099 NM_198194	-30046	-	CR542100 X60067 AB528375 DQ891058 DQ894236 CU679799 TSC_hg19_v1_chr9_-_124132480 M81635	-30113	-	BC017491 TSC_hg19_v1_chr9_+_124086860	-75716	+	AF378121 AF378122 AF378123 TSC_hg19_v1_chr9_-_124262101 BC045756	99501	-	NM_032552	166810	+	TSC_hg19_v1_chr9_+_124461442 AF367051	298918	+	BC010703|STOM|2040|stomatin##AK307999|STOM|2040|stomatin##AK304449|STOM|2040|stomatin##AK304518|STOM|2040|stomatin##AK302977|STOM|2040|stomatin##NM_004099|STOM|2040|stomatin##NM_198194|STOM|2040|stomatin##CR542100|STOM|2040|stomatin##X60067|STOM|2040|stomatin##DQ891058|STOM|2040|stomatin##DQ894236|STOM|2040|stomatin##M81635|STOM|2040|stomatin##BC017491|GSN|2934|gelsolin##AF378121|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378122|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378123|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC045756|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##NM_032552|DAB2IP|153090|DAB2 interacting protein##AF367051|DAB2IP|153090|DAB2 interacting protein	0.99795	CTCF.p2:20:0.998
chr13	25542618	25542750	reg1007554.p1	12.635	+	TSC_hg19_v1_chr13_-_25497054 NM_018451	-45615	-	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	-45715	-	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	-204365	+	NM_030979 AL136900 AK313336 BC045608 BC027617 AF132026 DQ892103 DQ895297	127621	+	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	202976	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	203133	-	NM_018451|CENPJ|55835|centromere protein J##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##NM_030979|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AL136900|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK313336|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC045608|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC027617|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AF132026|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ892103|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ895297|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A	0.996435	CTCF.p2:16:0.996
chr6	107996664	107996780	reg1005277.p2	12.635	+	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	-185294	+	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	-215992	-	BC131628 NM_001080450	-561087	-	AK303562 AK074125 TSC_hg19_v1_chr6_-_108145518 AK093571 AX748208 NM_198081	148794	-	AF100141 CU690382 CU690568 BC001153 TSC_hg19_v1_chr6_-_108279282 AK074835	282535	-	TSC_hg19_v1_chr6_-_108279316 AJ011779	282590	-	NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AK303562|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK074125|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK093571|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_198081|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)##AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)	1.063432	CTCF.p2:-3:0.986
chr7	115876198	115876320	reg1005364.p1	12.635	+	AK310995 NM_152829 AK291802 AF245357	-13240	+	NM_015641 AK299104 TSC_hg19_v1_chr7_+_115850592 BC001451 AK021575 AK300546 AK309324 AK222840 AF245356 AJ250865 AK315644 AB529039 EU176352 EU176694	-25606	+	TSC_hg19_v1_chr7_-_115670864 CR933605 NM_001018058 NM_012252	-205407	-	TSC_hg19_v1_chr7_+_116139705 AY353255 BC005256 NM_001206747 NM_001233 NM_198212 AK310786 AK311964 AF035752 AB451285 AB451417 AB489180 AM393815 BT007051 CR407685	263468	+	NM_001206748	263838	+	NM_001753 AK290871	288581	+	AK310995|TES|26136|testis derived transcript (3 LIM domains)##NM_152829|TES|26136|testis derived transcript (3 LIM domains)##AK291802|TES|26136|testis derived transcript (3 LIM domains)##AF245357|TES|26136|testis derived transcript (3 LIM domains)##NM_015641|TES|26136|testis derived transcript (3 LIM domains)##AK299104|TES|26136|testis derived transcript (3 LIM domains)##BC001451|TES|26136|testis derived transcript (3 LIM domains)##AK021575|TES|26136|testis derived transcript (3 LIM domains)##AK300546|TES|26136|testis derived transcript (3 LIM domains)##AK309324|TES|26136|testis derived transcript (3 LIM domains)##AK222840|TES|26136|testis derived transcript (3 LIM domains)##AF245356|TES|26136|testis derived transcript (3 LIM domains)##AJ250865|TES|26136|testis derived transcript (3 LIM domains)##AK315644|TES|26136|testis derived transcript (3 LIM domains)##EU176352|TES|26136|testis derived transcript (3 LIM domains)##EU176694|TES|26136|testis derived transcript (3 LIM domains)##CR933605|TFEC|22797|transcription factor EC##NM_001018058|TFEC|22797|transcription factor EC##NM_012252|TFEC|22797|transcription factor EC##AY353255|CAV2|858|caveolin 2##BC005256|CAV2|858|caveolin 2##NM_001206747|CAV2|858|caveolin 2##NM_001233|CAV2|858|caveolin 2##NM_198212|CAV2|858|caveolin 2##AK310786|CAV2|858|caveolin 2##AK311964|CAV2|858|caveolin 2##AF035752|CAV2|858|caveolin 2##AB451285|CAV2|858|caveolin 2##AB451417|CAV2|858|caveolin 2##AM393815|CAV2|858|caveolin 2##BT007051|CAV2|858|caveolin 2##CR407685|CAV2|858|caveolin 2##NM_001206748|CAV2|858|caveolin 2##NM_001753|CAV1|857|caveolin 1, caveolae protein, 22kDa##AK290871|CAV1|857|caveolin 1, caveolae protein, 22kDa	0.985104	CTCF.p2:16:0.985
chr7	130443307	130443443	reg1005564.p1	12.635	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-24448	-	AF294347 AF431815 BC038415 NM_052933	-72020	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-89780	-	TSC_hg19_v1_chr7_-_130792857 BC047367	349484	-	AK294384 NM_001145354	351479	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	569231	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.991973	CTCF.p2:31:0.992
chr13	26758982	26759099	reg1006552.p1	12.634	+	BC132898 BC137092 AY358775 NM_001007538	-133860	-	AK302980 TSC_hg19_v1_chr13_+_26042965	-716075	+	TSC_hg19_v1_chr13_+_26042926 AK126031	-716111	+	AL133621 TSC_hg19_v1_chr13_-_26789203	30095	-	TSC_hg19_v1_chr13_-_26795853 AY009109 NM_183044	36817	-	BC034688 TSC_hg19_v1_chr13_-_26795942 AK293272 AJ010347 NM_183043	36937	-	BC132898|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##BC137092|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AY358775|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##NM_001007538|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AK302980|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK126031|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AL133621|RNF6|6049|ring finger protein (C3H2C3 type) 6##AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6##BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6##AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6##AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6	1.031074	CTCF.p2:-10:0.998
chr16	52946613	52946722	reg1005757.p1	12.633	+	AK299202 NM_001146188	-364954	-	NM_001080430	-365862	-	NM_001242473	-838821	-	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	142214	+	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	186432	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	218393	+	AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##NM_001242473|LOC388276|388276|hCG2045437##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9	0.989984	CTCF.p2:1:0.990
chr3	41922844	41922977	reg1006869.p1	12.633	+	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	-681886	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	-681961	+	TSC_hg19_v1_chr3_+_40566471 BC101619 BC113415 CR749268	-1356410	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	80649	-	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	209923	+	TSC_hg19_v1_chr3_+_42190749 AK294221	267838	+	AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC101619|ZNF621|285268|zinc finger protein 621##BC113415|ZNF621|285268|zinc finger protein 621##CR749268|ZNF621|285268|zinc finger protein 621##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1	0.738892	CTCF.p2:13:0.739
chr12	96910586	96910721	reg1005402.p1	12.632	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-116336	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	-116670	-	TSC_hg19_v1_chr12_+_96588254 BC017371	-322386	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	390378	+	BC027605 NM_001135175	390590	+	TSC_hg19_v1_chr12_-_98897622 AK126817	1986974	-	AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK126817|LOC643770|643770|uncharacterized LOC643770	0.915855	CTCF.p2:20:0.916
chr14	93147527	93147630	reg1005716.p1	12.632	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	-28755	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	-28942	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-167619	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	67381	-	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	113108	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	241866	+	AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)	0.994798	CTCF.p2:15:0.995
chr9	114522478	114522640	reg1005772.p2	12.632	+	BC041858 AK126055 NM_001080551	-757	-	BC107574 TSC_hg19_v1_chr9_+_114423894 BC010384 BC016319 U31383 BC072671 BC015206 AB463708 AF493877	-98658	+	TSC_hg19_v1_chr9_+_114423856 NM_001017998 NM_001198664	-98697	+	AL833535 NM_173521	23216	-	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	136555	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	136908	+	BC041858|C9orf84|158401|chromosome 9 open reading frame 84##AK126055|C9orf84|158401|chromosome 9 open reading frame 84##NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84##BC107574|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC010384|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC016319|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##U31383|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC072671|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC015206|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##AF493877|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##NM_001017998|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##NM_001198664|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase	0.900185	CTCF.p2:-29:0.900
chr3	132061975	132062110	reg1007424.p1	12.631	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	-25754	+	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	-25804	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	-308202	-	AB014578 BC151246 TSC_hg19_v1_chr3_+_132136540 AY779857 BC043583 NM_015268	74485	+	AK304461 NM_016557 AK313923 AF110640 BC069438	254066	+	NM_178445	256938	+	M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##AB014578|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC151246|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AY779857|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC043583|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##NM_015268|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AK304461|CCRL1|51554|chemokine (C-C motif) receptor-like 1##NM_016557|CCRL1|51554|chemokine (C-C motif) receptor-like 1##AK313923|CCRL1|51554|chemokine (C-C motif) receptor-like 1##AF110640|CCRL1|51554|chemokine (C-C motif) receptor-like 1##BC069438|CCRL1|51554|chemokine (C-C motif) receptor-like 1##NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1	0.698704	CTCF.p2:2:0.699
chr19	41104617	41104737	reg1005887.p1	12.630	+	TSC_hg19_v1_chr19_+_41103115 AF051345 NM_001042544	-1575	+	NM_003573 Y13622	-5606	+	TSC_hg19_v1_chr19_+_41083061 AK300808 AK123695	-21620	+	TSC_hg19_v1_chr19_+_41105586 AK309484	902	+	TSC_hg19_v1_chr19_+_41107274 AF051344 NM_001042545	2572	+	TSC_hg19_v1_chr19_+_41116099 AK303613	11438	+	AF051345|LTBP4|8425|latent transforming growth factor beta binding protein 4##NM_001042544|LTBP4|8425|latent transforming growth factor beta binding protein 4##NM_003573|LTBP4|8425|latent transforming growth factor beta binding protein 4##Y13622|LTBP4|8425|latent transforming growth factor beta binding protein 4##AK300808|SHKBP1|92799|SH3KBP1 binding protein 1##AK123695|SHKBP1|92799|SH3KBP1 binding protein 1##AK309484|LTBP4|8425|latent transforming growth factor beta binding protein 4##AF051344|LTBP4|8425|latent transforming growth factor beta binding protein 4##NM_001042545|LTBP4|8425|latent transforming growth factor beta binding protein 4	0.941562	CTCF.p2:2:0.942
chr22	33414370	33414487	reg1005544.p2	12.629	+	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-11702	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-216676	+	TSC_hg19_v1_chr22_+_33197690 AK311702 AK314871 AK298126 BC013086 U14394 AX801509 U02571 S78453 U67195	-216734	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	39927	-	AJ007583 AB011181 NM_004737 NM_133642	901942	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	2047721	+	CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK314871|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK298126|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC013086|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U14394|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U02571|TIMP3|7078|TIMP metallopeptidase inhibitor 3##S78453|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U67195|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox	0.997327	CTCF.p2:-2:0.997
chr5	82726339	82726478	reg1007268.p1	12.629	+	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	-353025	+	TSC_hg19_v1_chr5_-_82373255 NM_174909	-353146	-	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	-353211	-	NM_001126336 NM_001164097 NM_001164098 NM_004385 TSC_hg19_v1_chr5_+_82767562 U16306 U26555 X15998 AK307642 AB209491 BC050524 D32039	41209	+	AK313713 NM_001884 X17405 X78076 X78075	290526	-	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	953838	-	NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_174909|TMEM167A|153339|transmembrane protein 167A##BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##NM_001126336|VCAN|1462|versican##NM_001164097|VCAN|1462|versican##NM_001164098|VCAN|1462|versican##NM_004385|VCAN|1462|versican##U16306|VCAN|1462|versican##U26555|VCAN|1462|versican##X15998|VCAN|1462|versican##AK307642|VCAN|1462|versican##AB209491|VCAN|1462|versican##BC050524|VCAN|1462|versican##D32039|VCAN|1462|versican##AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	0.743165	CTCF.p2:-1:0.743
chr20	32255831	32255952	reg1005832.p2	12.628	+	NM_001024675 BC137111 BC137114	-1578	+	DQ080434 NM_080825 BC032818	-5776	+	BC015066 NM_001039709 NM_005093 AF069747 AF052212	-105714	+	TSC_hg19_v1_chr20_-_32262195 AF193759 AK291895 BC023270 AF409141 BC047673 AK023706 AK309285	6305	-	TSC_hg19_v1_chr20_-_32262254 NM_031231 NM_031232	6377	-	AB590894 TSC_hg19_v1_chr20_-_32274123 BC058902	18219	-	NM_001024675|ACTL10|170487|actin-like 10##BC137111|ACTL10|170487|actin-like 10##BC137114|ACTL10|170487|actin-like 10##DQ080434|C20orf144|128864|chromosome 20 open reading frame 144##NM_080825|C20orf144|128864|chromosome 20 open reading frame 144##BC032818|C20orf144|128864|chromosome 20 open reading frame 144##BC015066|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##NM_001039709|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##NM_005093|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AF069747|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AF052212|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AF193759|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##AK291895|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##BC023270|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##AF409141|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##BC047673|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##AK023706|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##AK309285|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##NM_031231|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##NM_031232|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##BC058902|E2F1|1869|E2F transcription factor 1	0.987631	CTCF.p2:7:0.988
chr2	220159684	220159775	reg1003990.p1	12.628	+	TSC_hg19_v1_chr2_+_220144087 AK312723 NM_001039550 NM_006736 AK293888 BC011609 BC040494 AK292761 AK289626	-15582	+	BC009238 TSC_hg19_v1_chr2_-_220118641 AK054731 NM_006000	-41102	-	TSC_hg19_v1_chr2_+_220110219 AK292694 NM_001008910 AK310793 AK298471 AK225526 AF060798 BC002618 AF203910 AK225392 BC053998 AK096954 AK302182	-49522	+	TSC_hg19_v1_chr2_-_220173693 AK296335 NM_001199764	13981	-	AK314574 TSC_hg19_v1_chr2_-_220174093 AK294490 BC070053 L18983	14374	-	TSC_hg19_v1_chr2_-_220174202 AK291469 NM_001199763 NM_002846	14518	-	AK312723|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##NM_001039550|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##NM_006736|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK293888|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##BC011609|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##BC040494|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK292761|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK289626|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##BC009238|TUBA4A|7277|tubulin, alpha 4a##AK054731|TUBA4A|7277|tubulin, alpha 4a##NM_006000|TUBA4A|7277|tubulin, alpha 4a##AK292694|STK16|8576|serine/threonine kinase 16##NM_001008910|STK16|8576|serine/threonine kinase 16##AK310793|STK16|8576|serine/threonine kinase 16##AK298471|STK16|8576|serine/threonine kinase 16##AK225526|STK16|8576|serine/threonine kinase 16##AF060798|STK16|8576|serine/threonine kinase 16##BC002618|STK16|8576|serine/threonine kinase 16##AF203910|STK16|8576|serine/threonine kinase 16##AK225392|STK16|8576|serine/threonine kinase 16##BC053998|STK16|8576|serine/threonine kinase 16##AK096954|STK16|8576|serine/threonine kinase 16##AK302182|STK16|8576|serine/threonine kinase 16##AK296335|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##NM_001199764|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK314574|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK294490|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##BC070053|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##L18983|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK291469|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##NM_001199763|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##NM_002846|PTPRN|5798|protein tyrosine phosphatase, receptor type, N	1.05005	CTCF.p2:11:0.993
chr2	62637270	62637388	reg1005737.p4	12.628	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-214063	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-504500	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-521543	-	BC047439 AK091902 AX747245 NM_198276	96210	-	AK292545 NM_001142615	263656	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	295637	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.370505	CTCF.p2:15:0.371
chr14	62361313	62361429	reg1005050.p1	12.627	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	-132252	+	FJ790247 NM_001243084	-197032	+	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	-199181	+	AJ617628 NM_031914 BC117363 BC143598 HQ258344 AB102949	101267	+	TSC_hg19_v1_chr14_+_62584125 BX248751	222787	+	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	1150558	-	AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AJ617628|SYT16|83851|synaptotagmin XVI##NM_031914|SYT16|83851|synaptotagmin XVI##BC117363|SYT16|83851|synaptotagmin XVI##BC143598|SYT16|83851|synaptotagmin XVI##HQ258344|SYT16|83851|synaptotagmin XVI##AB102949|SYT16|83851|synaptotagmin XVI##BX248751|FLJ43390|646113|uncharacterized LOC646113##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5	0.451549	CTCF.p2:9:0.452
chr19	4804026	4804171	reg1007437.p1	12.627	+	TSC_hg19_v1_chr19_+_4791757 AK074232 BC004988 AY356352 EU446817 AB384759 AJ311359	-12286	+	AK126532 AK315554 TSC_hg19_v1_chr19_+_4791756	-12342	+	NM_018708 TSC_hg19_v1_chr19_+_4791745	-12362	+	AF070530 TSC_hg19_v1_chr19_-_4817612	13460	-	TSC_hg19_v1_chr19_-_4831725 BC035331 NM_182919	27627	-	TSC_hg19_v1_chr19_-_4867650 AK225045 BC001590	63547	-	AK074232|FEM1A|55527|fem-1 homolog a (C. elegans)##BC004988|FEM1A|55527|fem-1 homolog a (C. elegans)##AY356352|FEM1A|55527|fem-1 homolog a (C. elegans)##EU446817|FEM1A|55527|fem-1 homolog a (C. elegans)##AJ311359|FEM1A|55527|fem-1 homolog a (C. elegans)##AK126532|FEM1A|55527|fem-1 homolog a (C. elegans)##AK315554|FEM1A|55527|fem-1 homolog a (C. elegans)##NM_018708|FEM1A|55527|fem-1 homolog a (C. elegans)##AF070530|TICAM1|148022|toll-like receptor adaptor molecule 1##BC035331|TICAM1|148022|toll-like receptor adaptor molecule 1##NM_182919|TICAM1|148022|toll-like receptor adaptor molecule 1##AK225045|PLIN3|10226|perilipin 3##BC001590|PLIN3|10226|perilipin 3	1.039299	CTCF.p2:-24:0.993
chr16	66517739	66517872	reg1007507.p1	12.626	+	NM_001136106 NM_001178020 NM_001197224 NM_001197225 TSC_hg19_v1_chr16_+_66460907	-56944	+	AK300461 TSC_hg19_v1_chr16_+_66400593 X59796 AK300299 AB209908 AB035304 BC096363 BC096364 BC096365 BC117520	-117203	+	TSC_hg19_v1_chr16_+_66400559 U84722	-117245	+	AB472397 TSC_hg19_v1_chr16_-_66551118	33306	-	TSC_hg19_v1_chr16_-_66583778 U80628 AK302976	65878	-	TSC_hg19_v1_chr16_-_66584026 AK294627 AK295808 AK316226	66187	-	NM_001136106|BEAN1|146227|brain expressed, associated with NEDD4, 1##NM_001178020|BEAN1|146227|brain expressed, associated with NEDD4, 1##NM_001197224|BEAN1|146227|brain expressed, associated with NEDD4, 1##NM_001197225|BEAN1|146227|brain expressed, associated with NEDD4, 1##AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB472397|TK2|7084|thymidine kinase 2, mitochondrial##U80628|TK2|7084|thymidine kinase 2, mitochondrial##AK302976|TK2|7084|thymidine kinase 2, mitochondrial##AK294627|TK2|7084|thymidine kinase 2, mitochondrial##AK295808|TK2|7084|thymidine kinase 2, mitochondrial##AK316226|TK2|7084|thymidine kinase 2, mitochondrial	0.976506	CTCF.p2:5:0.977
chr10	121510252	121510393	reg1005365.p2	12.625	+	TSC_hg19_v1_chr10_+_121485653 BC111493 BC052367 BC082755 AB385409	-24617	+	TSC_hg19_v1_chr10_+_121485596 BC067820 AB023183	-24708	+	TSC_hg19_v1_chr10_+_121485568 NM_001243195 NM_014937 AK307758	-24784	+	NM_001243194 AK123633	68454	+	TSC_hg19_v1_chr10_-_121602031 BC000935	91741	-	AK023143 TSC_hg19_v1_chr10_-_121632359 BC004183 BC007219 NM_024834	122018	-	BC111493|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC052367|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC082755|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC067820|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AB023183|INPP5F|22876|inositol polyphosphate-5-phosphatase F##NM_001243195|INPP5F|22876|inositol polyphosphate-5-phosphatase F##NM_014937|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK307758|INPP5F|22876|inositol polyphosphate-5-phosphatase F##NM_001243194|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK123633|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC000935|MCMBP|79892|minichromosome maintenance complex binding protein##AK023143|MCMBP|79892|minichromosome maintenance complex binding protein##BC004183|MCMBP|79892|minichromosome maintenance complex binding protein##BC007219|MCMBP|79892|minichromosome maintenance complex binding protein##NM_024834|MCMBP|79892|minichromosome maintenance complex binding protein	0.019199	
chr17	9828174	9828305	reg1005609.p1	12.624	+	AB001838 BT009838 AB528320 DQ892822 DQ896068 BC001720 S62028 S45545 AB593156 NM_002903 S43855	-19650	-	TSC_hg19_v1_chr17_+_9745847 BC041176 BC019818	-82380	+	AF105367 BC096261 BC096262 BC096264 NM_004246 BC096263	-98857	+	AJ224876 NM_003644 AK293834 AK315162	34532	-	AB385324 BT006891 DQ892802 DQ895910 CU674584 AB209030 AK294829 TSC_hg19_v1_chr17_-_9923322	95024	-	TSC_hg19_v1_chr17_-_9923331 AK309722	95153	-	AB001838|RCVRN|5957|recoverin##BT009838|RCVRN|5957|recoverin##DQ892822|RCVRN|5957|recoverin##DQ896068|RCVRN|5957|recoverin##BC001720|RCVRN|5957|recoverin##S62028|RCVRN|5957|recoverin##S45545|RCVRN|5957|recoverin##AB593156|RCVRN|5957|recoverin##NM_002903|RCVRN|5957|recoverin##S43855|RCVRN|5957|recoverin##BC041176|GLP2R|9340|glucagon-like peptide 2 receptor##BC019818|GLP2R|9340|glucagon-like peptide 2 receptor##AF105367|GLP2R|9340|glucagon-like peptide 2 receptor##BC096261|GLP2R|9340|glucagon-like peptide 2 receptor##BC096262|GLP2R|9340|glucagon-like peptide 2 receptor##BC096264|GLP2R|9340|glucagon-like peptide 2 receptor##NM_004246|GLP2R|9340|glucagon-like peptide 2 receptor##BC096263|GLP2R|9340|glucagon-like peptide 2 receptor##AJ224876|GAS7|8522|growth arrest-specific 7##NM_003644|GAS7|8522|growth arrest-specific 7##AK293834|GAS7|8522|growth arrest-specific 7##AK315162|GAS7|8522|growth arrest-specific 7##BT006891|GAS7|8522|growth arrest-specific 7##DQ892802|GAS7|8522|growth arrest-specific 7##DQ895910|GAS7|8522|growth arrest-specific 7##AB209030|GAS7|8522|growth arrest-specific 7##AK294829|GAS7|8522|growth arrest-specific 7##AK309722|GAS7|8522|growth arrest-specific 7	0.99785	CTCF.p2:-5:0.998
chr2	231663636	231663761	reg1004749.p1	12.624	+	AK292382 NM_001130849 NM_001130850 AK315692	-85420	+	TSC_hg19_v1_chr2_+_231577633 BC020570	-86054	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	-86152	+	TSC_hg19_v1_chr2_+_231729608 NM_001012514 NM_001012516 NM_030926	65862	+	TSC_hg19_v1_chr2_+_231729626 AF271781 AF272043	65931	+	TSC_hg19_v1_chr2_+_231729653 AK075361 AK090975 AK303199 AX746713	65947	+	AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##NM_016289|CAB39|51719|calcium binding protein 39##NM_001012514|ITM2C|81618|integral membrane protein 2C##NM_001012516|ITM2C|81618|integral membrane protein 2C##NM_030926|ITM2C|81618|integral membrane protein 2C##AF271781|ITM2C|81618|integral membrane protein 2C##AF272043|ITM2C|81618|integral membrane protein 2C##AK075361|ITM2C|81618|integral membrane protein 2C##AK090975|ITM2C|81618|integral membrane protein 2C##AK303199|ITM2C|81618|integral membrane protein 2C	0.997665	CTCF.p2:13:0.998
chr5	75031151	75031277	reg1007140.p1	12.624	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-17954	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	-22952	-	NM_001130105	-223409	-	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	348057	+	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	667902	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	887931	-	BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001130105|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2	0.905775	CTCF.p2:-12:0.906
chr6	5380012	5380141	reg1005132.p2	12.624	+	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-118386	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-118814	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-118910	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	627065	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	627621	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	940809	-	NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide	0.659671	CTCF.p2:4:0.660
chr2	225515652	225515806	reg1007770.p1	12.623	+	TSC_hg19_v1_chr2_-_225450116 NM_003590	-65609	-	TSC_hg19_v1_chr2_-_225450056 BC039598	-65654	-	TSC_hg19_v1_chr2_-_225450043 AB014517 BC092409	-65688	-	TSC_hg19_v1_chr2_-_225811768 EU236710	296025	-	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	391619	-	NM_020864 BC131727 AB040919	749916	+	NM_003590|CUL3|8452|cullin 3##BC039598|CUL3|8452|cullin 3##AB014517|CUL3|8452|cullin 3##BC092409|CUL3|8452|cullin 3##EU236710|DOCK10|55619|dedicator of cytokinesis 10##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2	0.976926	CTCF.p2:6:0.977
chr3	48442407	48442556	reg1005443.p1	12.623	+	AY247969 NM_001159927 NM_001159929 NM_207102 BC101303 BC101304 BC101305 BC101306	-28745	+	NM_001080525	-72651	-	DQ892283 DQ895483 AK308970 AF051941 TSC_hg19_v1_chr3_-_48342858 U90449 BC001808 BC012828 NM_005793 AK222555 AK294809 AK307332 AK297364 AK309090	-99630	-	TSC_hg19_v1_chr3_-_48471023 AB007867 BC146793 NM_002673	28399	-	TSC_hg19_v1_chr3_-_48471516 BC066773 NM_001130082 AK296776	29016	-	BC011993 AK022498 NM_024661	39042	-	AY247969|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12##NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12##BC101303|FBXW12|285231|F-box and WD repeat domain containing 12##BC101304|FBXW12|285231|F-box and WD repeat domain containing 12##BC101305|FBXW12|285231|F-box and WD repeat domain containing 12##BC101306|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)##DQ892283|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##DQ895483|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK308970|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AF051941|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##U90449|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC001808|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC012828|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##NM_005793|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK222555|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK294809|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK297364|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AB007867|PLXNB1|5364|plexin B1##BC146793|PLXNB1|5364|plexin B1##NM_002673|PLXNB1|5364|plexin B1##BC066773|PLXNB1|5364|plexin B1##NM_001130082|PLXNB1|5364|plexin B1##AK296776|PLXNB1|5364|plexin B1##BC011993|CCDC51|79714|coiled-coil domain containing 51##AK022498|CCDC51|79714|coiled-coil domain containing 51##NM_024661|CCDC51|79714|coiled-coil domain containing 51	0.99969	CTCF.p2:-17:1.000
chr1	176529068	176529209	reg1005404.p1	12.621	+	AF342989 AF342990 BC062665 BC104644 NM_020318 NM_021936 BC152552	-96826	+	AF527539 TSC_hg19_v1_chr1_-_176176377	-352762	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	-352769	-	BC142697 AB006627 BC146795 TSC_hg19_v1_chr1_-_177133827	604687	-	AK307820 AK295126 BC032870 BC049377 TSC_hg19_v1_chr1_-_177134004 NM_004319 NM_207108	604848	-	TSC_hg19_v1_chr1_-_177134042 AK309094	604937	-	AF342989|PAPPA2|60676|pappalysin 2##AF342990|PAPPA2|60676|pappalysin 2##BC062665|PAPPA2|60676|pappalysin 2##BC104644|PAPPA2|60676|pappalysin 2##NM_020318|PAPPA2|60676|pappalysin 2##NM_021936|PAPPA2|60676|pappalysin 2##BC152552|PAPPA2|60676|pappalysin 2##AF527539|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2##BC142697|ASTN1|460|astrotactin 1##AB006627|ASTN1|460|astrotactin 1##BC146795|ASTN1|460|astrotactin 1##AK307820|ASTN1|460|astrotactin 1##AK295126|ASTN1|460|astrotactin 1##BC032870|ASTN1|460|astrotactin 1##BC049377|ASTN1|460|astrotactin 1##NM_004319|ASTN1|460|astrotactin 1##NM_207108|ASTN1|460|astrotactin 1##AK309094|ASTN1|460|astrotactin 1	0.969746	CTCF.p2:0:0.970
chr1	178501573	178501699	reg1006045.p1	12.621	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-19370	+	AF047711 NM_004841 AK290308	-191002	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-437995	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	192737	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	338510	-	TSC_hg19_v1_chr1_+_178995028 AB007944	493384	+	AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##BC110611|RASAL2|9462|RAS protein activator like 2##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##AB007944|FAM20B|9917|family with sequence similarity 20, member B	0.998006	CTCF.p2:-10:0.998
chr15	101798464	101798592	reg1005333.p1	12.621	+	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	-6393	-	AB071402 TSC_hg19_v1_chr15_-_101791795	-6792	-	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-339016	+	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	19135	-	TSC_hg19_v1_chr15_-_101835402 AB528428 CU692724 AJ130971 AJ130972 DQ892838 DQ896084 BC071717	36853	-	TSC_hg19_v1_chr15_-_101835457 AK223110 AK312200 X13482 BC022816 AK290078 AK223070 BC067846 NM_003090	36903	-	BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S##AJ130971|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AJ130972|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##DQ892838|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##DQ896084|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC071717|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK223110|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK312200|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##X13482|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC022816|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK290078|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK223070|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC067846|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##NM_003090|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'	0.967878	CTCF.p2:2:0.968
chr19	42377339	42377486	reg1007337.p1	12.621	+	TSC_hg19_v1_chr19_+_42364325 AK311786 BC017386 D28389 M81757	-13082	+	TSC_hg19_v1_chr19_+_42364273 BC000023	-13136	+	BC018616 NM_001022	-13425	+	NM_001783 NM_021601 AK223371 M80462 M86921 AK315337 BC113731 BC113733 S46706 HQ258131 M74721 S75217 S79248 X83540	3869	+	BC064996 TSC_hg19_v1_chr19_+_42387266 NM_004706 NM_198977 BC011726	9865	+	TSC_hg19_v1_chr19_+_42387309 U64105	9906	+	AK311786|RPS19|6223|ribosomal protein S19##BC017386|RPS19|6223|ribosomal protein S19##M81757|RPS19|6223|ribosomal protein S19##BC000023|RPS19|6223|ribosomal protein S19##BC018616|RPS19|6223|ribosomal protein S19##NM_001022|RPS19|6223|ribosomal protein S19##NM_001783|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##NM_021601|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##AK223371|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##M80462|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##M86921|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##AK315337|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##BC113731|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##BC113733|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##S46706|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##HQ258131|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##M74721|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##S75217|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##S79248|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##X83540|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##BC064996|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_004706|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_198977|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC011726|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##U64105|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1	0.074934	
chr2	202097075	202097201	reg1005894.p2	12.621	+	TSC_hg19_v1_chr2_+_202047863 AK310746 U86214 AK304859 AK225475 AY690601 BC042844 U60519 AJ487678 AJ487679	-49278	+	NM_001206524 NM_001206542 NM_001230 NM_032974 NM_032976 NM_032977	-49518	+	AF041459 NM_001202515	-92141	+	NM_001080124 NM_001228 NM_033355 NM_033358 AF422927 AF422928 BC010390 AK310630 BC017031 U60520 X98176	1087	+	NM_001080125 AF422926 BC068050 AF422925 AF422929 X98172 AY429525	25659	+	NM_033356 X98173	28118	+	AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AF041459|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202515|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001080124|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001228|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033355|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033358|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422927|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422928|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC010390|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310630|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC017031|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##U60520|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98176|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001080125|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422926|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC068050|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422929|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98172|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033356|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98173|CASP8|841|caspase 8, apoptosis-related cysteine peptidase	0.994248	CTCF.p2:9:0.994
chr1	8075170	8075306	reg1007398.p1	12.620	+	TSC_hg19_v1_chr1_+_8021770 BC008188	-53442	+	AF021819 TSC_hg19_v1_chr1_+_8021756 AK130886 AK312000	-53478	+	TSC_hg19_v1_chr1_+_8021722 NM_001123377 NM_007262	-53517	+	AB528431 AJ276373 DQ892137 DQ895331 BC012839 TSC_hg19_v1_chr1_-_8075752	477	-	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	11123	-	NM_018948 TSC_hg19_v1_chr1_-_8086396	11160	-	BC008188|PARK7|11315|parkinson protein 7##AF021819|PARK7|11315|parkinson protein 7##AK130886|PARK7|11315|parkinson protein 7##AK312000|PARK7|11315|parkinson protein 7##NM_001123377|PARK7|11315|parkinson protein 7##NM_007262|PARK7|11315|parkinson protein 7##AJ276373|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ892137|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ895331|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC012839|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1	0.931588	CTCF.p2:2:0.932
chr2	225511093	225511232	reg1007598.p1	12.620	+	TSC_hg19_v1_chr2_-_225450116 NM_003590	-61042	-	TSC_hg19_v1_chr2_-_225450056 BC039598	-61087	-	TSC_hg19_v1_chr2_-_225450043 AB014517 BC092409	-61121	-	TSC_hg19_v1_chr2_-_225811768 EU236710	300592	-	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	396186	-	NM_020864 BC131727 AB040919	754483	+	NM_003590|CUL3|8452|cullin 3##BC039598|CUL3|8452|cullin 3##AB014517|CUL3|8452|cullin 3##BC092409|CUL3|8452|cullin 3##EU236710|DOCK10|55619|dedicator of cytokinesis 10##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2	1.137515	CTCF.p2:15:0.933	CTCF.p2:-53:0.205
chr8	12566212	12566345	reg1005764.p1	12.619	+	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-272374	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-272435	-	DQ012022 NM_001037804 NM_001195257	-390454	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	46726	-	AK296010 NM_020844	236888	+	AB040889 NM_001099677	303494	+	BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456	1.115574	CTCF.p2:-28:0.375
chr2	158880948	158881084	reg1007267.p1	12.618	+	BC033529 NM_001135098	-29326	+	AK297765 AK313630 NM_001111067	-148659	-	BC033867 BC036748 NM_001105	-149394	-	AK122743 NM_173355	77365	+	CU677295 BC105928 BC107596 BC107597 AK123220 AK058105 AF458588 BC015395 AK309246 TSC_hg19_v1_chr2_-_159313250 AK308783 AK311042 NM_001171637 NM_138803	432093	-	TSC_hg19_v1_chr2_+_159313419 BC034473	432419	+	BC033529|UPP2|151531|uridine phosphorylase 2##NM_001135098|UPP2|151531|uridine phosphorylase 2##AK297765|ACVR1|90|activin A receptor, type I##AK313630|ACVR1|90|activin A receptor, type I##NM_001111067|ACVR1|90|activin A receptor, type I##BC033867|ACVR1|90|activin A receptor, type I##BC036748|ACVR1|90|activin A receptor, type I##NM_001105|ACVR1|90|activin A receptor, type I##AK122743|UPP2|151531|uridine phosphorylase 2##NM_173355|UPP2|151531|uridine phosphorylase 2##BC105928|CCDC148|130940|coiled-coil domain containing 148##BC107596|CCDC148|130940|coiled-coil domain containing 148##BC107597|CCDC148|130940|coiled-coil domain containing 148##AK123220|CCDC148|130940|coiled-coil domain containing 148##AK058105|CCDC148|130940|coiled-coil domain containing 148##AF458588|CCDC148|130940|coiled-coil domain containing 148##BC015395|CCDC148|130940|coiled-coil domain containing 148##AK309246|CCDC148|130940|coiled-coil domain containing 148##AK308783|CCDC148|130940|coiled-coil domain containing 148##AK311042|CCDC148|130940|coiled-coil domain containing 148##NM_001171637|CCDC148|130940|coiled-coil domain containing 148##NM_138803|CCDC148|130940|coiled-coil domain containing 148##BC034473|PKP4|8502|plakophilin 4	0.27897	CTCF.p2:-6:0.279
chr4	123638138	123638241	reg1004999.p1	12.617	+	CU688120 CU688122 DQ645417 BC069124 BC066258 BC066259 BC066260 BC066261 BC066262 NM_001207006 NM_021803 AF254069	-96001	-	AF532913 AY283686 AY523040 DQ231169 S77835 AB451325 AB451454 AB591003 CU688118 DQ861285 AF228636 BC066254 BC066255 BC066256 BC066257 BC070338 S77834 U25676 V00564 NM_000586 X01586	-260603	-	NM_001159285 NM_001159295 BC040229 AK093297 AX748040	-337557	+	AK123553 NM_001178007 NM_152618 BC055426 TSC_hg19_v1_chr4_+_123653916 BX538148	15716	+	TSC_hg19_v1_chr4_+_123747833 J04513 NM_002006 BC111737 BC118573 BC118654	109655	+	TSC_hg19_v1_chr4_+_123747985 M27968	109777	+	DQ645417|IL21|59067|interleukin 21##BC069124|IL21|59067|interleukin 21##BC066258|IL21|59067|interleukin 21##BC066259|IL21|59067|interleukin 21##BC066260|IL21|59067|interleukin 21##BC066261|IL21|59067|interleukin 21##BC066262|IL21|59067|interleukin 21##NM_001207006|IL21|59067|interleukin 21##NM_021803|IL21|59067|interleukin 21##AF254069|IL21|59067|interleukin 21##AF532913|IL2|3558|interleukin 2##AY283686|IL2|3558|interleukin 2##AY523040|IL2|3558|interleukin 2##DQ231169|IL2|3558|interleukin 2##S77835|IL2|3558|interleukin 2##AB451325|IL2|3558|interleukin 2##AB451454|IL2|3558|interleukin 2##DQ861285|IL2|3558|interleukin 2##AF228636|IL2|3558|interleukin 2##BC066254|IL2|3558|interleukin 2##BC066255|IL2|3558|interleukin 2##BC066256|IL2|3558|interleukin 2##BC066257|IL2|3558|interleukin 2##BC070338|IL2|3558|interleukin 2##S77834|IL2|3558|interleukin 2##U25676|IL2|3558|interleukin 2##V00564|IL2|3558|interleukin 2##NM_000586|IL2|3558|interleukin 2##X01586|IL2|3558|interleukin 2##NM_001159285|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##NM_001159295|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##BC040229|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK093297|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK123553|BBS12|166379|Bardet-Biedl syndrome 12##NM_001178007|BBS12|166379|Bardet-Biedl syndrome 12##NM_152618|BBS12|166379|Bardet-Biedl syndrome 12##BC055426|BBS12|166379|Bardet-Biedl syndrome 12##BX538148|BBS12|166379|Bardet-Biedl syndrome 12##J04513|FGF2|2247|fibroblast growth factor 2 (basic)##NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)##BC111737|FGF2|2247|fibroblast growth factor 2 (basic)##M27968|FGF2|2247|fibroblast growth factor 2 (basic)	0.852929	CTCF.p2:-6:0.853
chr11	102811829	102811962	reg1005766.p2	12.616	+	AB590529 HQ258263 L23808 AK313959 BC112301 BC143773 NM_002426	-66181	-	DQ399598 CU686970 J03209 X05232 BC074815 BC074869 BC105954 BC107490 BC107491 AK313310 AK223283 AK223291 TSC_hg19_v1_chr11_-_102714339 BC069676 BC069716 NM_002422	-97599	-	TSC_hg19_v1_chr11_-_102668892 NM_001145938 NM_002421	-142967	-	AY256443 AY256444 HQ258010 X75308 BC067522 BC067523 BC074807 BC074808 AK315341 X81334 AK222748 AK292211 NM_002427	14552	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	150846	-	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	151028	-	HQ258263|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##L23808|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##AK313959|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##BC112301|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##BC143773|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##NM_002426|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##DQ399598|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##J03209|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##X05232|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074815|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074869|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC105954|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107490|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107491|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK313310|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223283|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223291|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069676|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069716|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##NM_002422|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##NM_001145938|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##NM_002421|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AY256443|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AY256444|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##HQ258010|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##X75308|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC067522|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC067523|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC074807|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC074808|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK315341|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##X81334|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK222748|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK292211|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##NM_002427|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	0.999298	CTCF.p2:1:0.999
chr18	11040945	11041080	reg1005651.p2	12.616	+	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-514915	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-514956	+	TSC_hg19_v1_chr18_+_10526033 AK294038 U78107 AK314495	-514984	+	NM_022068	107748	-	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	648200	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	710503	+	CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK294038|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##U78107|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK314495|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.989403	CTCF.p2:0:0.989
chr21	15776171	15776291	reg1006752.p1	12.616	+	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-20758	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-187734	+	AB463838 AY197607 NM_198996	-196983	-	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	142418	-	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	660986	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	1326094	+	AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AY197607|LIPI|149998|lipase, member I##NM_198996|LIPI|149998|lipase, member I##BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25	0.63171	CTCF.p2:0:0.632
chr9	20356443	20356575	reg1006697.p1	12.616	+	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-569558	-	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-947506	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-976282	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	265939	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	265987	-	AK056522 AY139834 NM_017794	301798	+	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797	0.962395	CTCF.p2:-19:0.962
chr12	47701686	47701821	reg1007125.p1	12.614	+	TSC_hg19_v1_chr12_+_47610379 BC016154 AK307166	-91422	+	BC008360 NM_138371	-91702	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	-228170	-	TSC_hg19_v1_chr12_-_48099790 BC056415 AK025561 AK299465	398014	-	TSC_hg19_v1_chr12_-_48099814 BC003680	398061	-	TSC_hg19_v1_chr12_-_48099819 NM_001146075 NM_001146076 NM_024604	398078	-	BC016154|FAM113B|91523|family with sequence similarity 113, member B##BC008360|FAM113B|91523|family with sequence similarity 113, member B##NM_138371|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC056415|RPAP3|79657|RNA polymerase II associated protein 3##AK025561|RPAP3|79657|RNA polymerase II associated protein 3##AK299465|RPAP3|79657|RNA polymerase II associated protein 3##BC003680|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146075|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146076|RPAP3|79657|RNA polymerase II associated protein 3##NM_024604|RPAP3|79657|RNA polymerase II associated protein 3	0.0	
chr16	85649674	85649794	reg1006365.p1	12.614	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	-2781	+	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	-4713	+	BC093665 BC111944 AK126284 NM_198491	-503680	-	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	72808	-	BC003186 NM_016095 TSC_hg19_v1_chr16_-_85722590	72865	-	TSC_hg19_v1_chr16_-_85784703 NM_206967	134954	-	NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC003186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_016095|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_206967|C16orf74|404550|chromosome 16 open reading frame 74	0.033938	
chr20	5107148	5107268	reg1003491.p1	12.614	+	CR536501 CR541799 AB464071 DQ891403 DQ894581 M15796 TSC_hg19_v1_chr20_-_5100605 BC000491 BC062439 D28458 AK313286 M29310 NM_182649	-6653	-	TSC_hg19_v1_chr20_-_5093685 AY359115 BC015113 AK055700 BC110408 BC011990 BC009768 BC009770 AF161392 BC009769 AK315606 BC066317 AK309823 BC070212 NM_001009923 NM_001009924 NM_001009925 NM_014145	-13593	-	BC013112 AF164142 NM_203327	-116283	-	AK300558 AK311014 NM_002592	18	-	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	314	+	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	487	+	CR536501|PCNA|5111|proliferating cell nuclear antigen##CR541799|PCNA|5111|proliferating cell nuclear antigen##DQ891403|PCNA|5111|proliferating cell nuclear antigen##DQ894581|PCNA|5111|proliferating cell nuclear antigen##M15796|PCNA|5111|proliferating cell nuclear antigen##BC000491|PCNA|5111|proliferating cell nuclear antigen##BC062439|PCNA|5111|proliferating cell nuclear antigen##D28458|PCNA|5111|proliferating cell nuclear antigen##AK313286|PCNA|5111|proliferating cell nuclear antigen##NM_182649|PCNA|5111|proliferating cell nuclear antigen##AY359115|C20orf30|29058|chromosome 20 open reading frame 30##BC015113|C20orf30|29058|chromosome 20 open reading frame 30##AK055700|C20orf30|29058|chromosome 20 open reading frame 30##BC110408|C20orf30|29058|chromosome 20 open reading frame 30##BC011990|C20orf30|29058|chromosome 20 open reading frame 30##BC009768|C20orf30|29058|chromosome 20 open reading frame 30##BC009770|C20orf30|29058|chromosome 20 open reading frame 30##AF161392|C20orf30|29058|chromosome 20 open reading frame 30##BC009769|C20orf30|29058|chromosome 20 open reading frame 30##AK315606|C20orf30|29058|chromosome 20 open reading frame 30##BC066317|C20orf30|29058|chromosome 20 open reading frame 30##AK309823|C20orf30|29058|chromosome 20 open reading frame 30##BC070212|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009923|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009924|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009925|C20orf30|29058|chromosome 20 open reading frame 30##NM_014145|C20orf30|29058|chromosome 20 open reading frame 30##BC013112|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AF164142|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_203327|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK300558|PCNA|5111|proliferating cell nuclear antigen##NM_002592|PCNA|5111|proliferating cell nuclear antigen##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	0.13106	
chr20	15689781	15689898	reg1006581.p1	12.613	+	BC018687 NM_001033087	-512336	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-1371583	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-1713503	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	864174	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	1020824	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	1039182	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	1.951887	CTCF.p2:-3:0.998	CTCF.p2:37:0.953
chr10	45470504	45470620	reg1004759.p2	12.612	+	TSC_hg19_v1_chr10_+_45455249 AY216713 AY216714 AY216715 AY216716 NM_032023 BC032593 AF260335 AK311531	-15330	+	AK056518 TSC_hg19_v1_chr10_-_45455156	-15415	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	-63844	+	BC011402 AB025244 TSC_hg19_v1_chr10_-_45474258 AK002191 AK098476 AL136653 AB022718 AK300839 AK312496 NM_007021	3707	-	NM_006963 AK291508 AK312278 BC053687 BC010642	25765	+	TSC_hg19_v1_chr10_-_45496265 AK311351 HQ258049 BC062568 BC130369 BC130395 AK055129 NM_001039380	25802	-	AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##BC011402|C10orf10|11067|chromosome 10 open reading frame 10##AB025244|C10orf10|11067|chromosome 10 open reading frame 10##AK002191|C10orf10|11067|chromosome 10 open reading frame 10##AK098476|C10orf10|11067|chromosome 10 open reading frame 10##AL136653|C10orf10|11067|chromosome 10 open reading frame 10##AB022718|C10orf10|11067|chromosome 10 open reading frame 10##AK300839|C10orf10|11067|chromosome 10 open reading frame 10##AK312496|C10orf10|11067|chromosome 10 open reading frame 10##NM_007021|C10orf10|11067|chromosome 10 open reading frame 10##NM_006963|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK291508|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK312278|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC053687|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC010642|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK311351|C10orf25|220979|chromosome 10 open reading frame 25##HQ258049|C10orf25|220979|chromosome 10 open reading frame 25##BC062568|C10orf25|220979|chromosome 10 open reading frame 25##BC130369|C10orf25|220979|chromosome 10 open reading frame 25##BC130395|C10orf25|220979|chromosome 10 open reading frame 25##AK055129|C10orf25|220979|chromosome 10 open reading frame 25##NM_001039380|C10orf25|220979|chromosome 10 open reading frame 25	0.996214	CTCF.p2:6:0.996
chr3	136840705	136840824	reg1007254.p1	12.612	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-163934	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-191427	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	-259672	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	642383	+	AK098474 NM_001002026 AF349452	876915	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	888239	+	AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18	0.8886	CTCF.p2:-11:0.889
chr3	129346883	129347042	reg1006812.p1	12.611	+	TSC_hg19_v1_chr3_-_129325518 NM_015103 AB014520 AY116661 BC150280	-21523	-	AY158091 NM_153833	-84906	+	NM_000539 BX537381 BC112104 BC112106 AB464154 AM392780	-99435	+	AK291448 BC039859 NM_001017395	252348	-	TSC_hg19_v1_chr3_-_129612445 NM_001128224	265456	-	TSC_hg19_v1_chr3_+_129612705 AK127796	265756	+	NM_015103|PLXND1|23129|plexin D1##AB014520|PLXND1|23129|plexin D1##AY116661|PLXND1|23129|plexin D1##BC150280|PLXND1|23129|plexin D1##AY158091|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_153833|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_000539|RHO|6010|rhodopsin##BX537381|RHO|6010|rhodopsin##BC112104|RHO|6010|rhodopsin##BC112106|RHO|6010|rhodopsin##AM392780|RHO|6010|rhodopsin##AK291448|TMCC1|23023|transmembrane and coiled-coil domain family 1##BC039859|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001017395|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001128224|TMCC1|23023|transmembrane and coiled-coil domain family 1##AK127796|LOC100507032|100507032|uncharacterized LOC100507032	0.0	
chr3	4392624	4392755	reg1005805.p1	12.611	+	TSC_hg19_v1_chr3_+_4345048 AK222734 AK297865 AK302296 AB590082 AF054989 BC011635 BC008931 U80776 AY952295 CU679994	-47626	+	AK307537 NM_001243723 NM_006515 TSC_hg19_v1_chr3_+_4345015	-47681	+	TSC_hg19_v1_chr3_+_3841114 NM_020873	-551590	+	AY208752 AY323910 AK057983 TSC_hg19_v1_chr3_-_4508936 AK302018 AB448737 BC110862	116243	-	TSC_hg19_v1_chr3_-_4508945 AY358092 AK075459	116254	-	AK295240 TSC_hg19_v1_chr3_-_4508953 BC121122 BC121123	116263	-	AK222734|SETMAR|6419|SET domain and mariner transposase fusion gene##AK297865|SETMAR|6419|SET domain and mariner transposase fusion gene##AK302296|SETMAR|6419|SET domain and mariner transposase fusion gene##AF054989|SETMAR|6419|SET domain and mariner transposase fusion gene##BC011635|SETMAR|6419|SET domain and mariner transposase fusion gene##BC008931|SETMAR|6419|SET domain and mariner transposase fusion gene##U80776|SETMAR|6419|SET domain and mariner transposase fusion gene##AY952295|SETMAR|6419|SET domain and mariner transposase fusion gene##AK307537|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_001243723|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_006515|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_020873|LRRN1|57633|leucine rich repeat neuronal 1##AY208752|SUMF1|285362|sulfatase modifying factor 1##AY323910|SUMF1|285362|sulfatase modifying factor 1##AK057983|SUMF1|285362|sulfatase modifying factor 1##AK302018|SUMF1|285362|sulfatase modifying factor 1##AB448737|SUMF1|285362|sulfatase modifying factor 1##BC110862|SUMF1|285362|sulfatase modifying factor 1##AY358092|SUMF1|285362|sulfatase modifying factor 1##AK075459|SUMF1|285362|sulfatase modifying factor 1##AK295240|SUMF1|285362|sulfatase modifying factor 1##BC121122|SUMF1|285362|sulfatase modifying factor 1##BC121123|SUMF1|285362|sulfatase modifying factor 1	0.903351	CTCF.p2:-15:0.903
chr4	10583843	10583980	reg1006094.p1	12.611	+	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-124901	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-465375	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-465433	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	102490	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	846621	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2902040	-	BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family	0.635501	CTCF.p2:-24:0.636
chr17	16492786	16492883	reg1003344.p2	12.610	+	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-20338	-	NM_001113567 NM_207387 TSC_hg19_v1_chr17_-_16395510	-97327	-	TSC_hg19_v1_chr17_-_16395091 AK093015 AX747857 BC144381	-97681	-	AK131401 NM_020787	64327	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	100770	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	382570	-	AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##NM_001113567|FAM211A|388341|family with sequence similarity 211, member A##NM_207387|FAM211A|388341|family with sequence similarity 211, member A##AK093015|FAM211A|388341|family with sequence similarity 211, member A##BC144381|FAM211A|388341|family with sequence similarity 211, member A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	0.85739	CTCF.p2:-1:0.857
chrX	78337506	78337664	reg1005149.p1	12.610	+	NM_014499 NM_198333 AK313218 AK292138 BC051875	-136713	+	NM_005296 AK314134	-334377	+	AK096184 NM_152694	-422761	-	AF345567 BC104922 BC104924 NM_032553	88883	+	CR456875 CU691874 EU446983 AY359051 AB209310 BC040437 BC010511 TSC_hg19_v1_chrX_-_78622829 AK223327 AK303238 AF038953 BC034485	285198	-	AK313154 NM_001171581 NM_004867	285442	-	NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##AK096184|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_152694|ZCCHC5|203430|zinc finger, CCHC domain containing 5##AF345567|GPR174|84636|G protein-coupled receptor 174##BC104922|GPR174|84636|G protein-coupled receptor 174##BC104924|GPR174|84636|G protein-coupled receptor 174##NM_032553|GPR174|84636|G protein-coupled receptor 174##CR456875|ITM2A|9452|integral membrane protein 2A##EU446983|ITM2A|9452|integral membrane protein 2A##AY359051|ITM2A|9452|integral membrane protein 2A##AB209310|ITM2A|9452|integral membrane protein 2A##BC040437|ITM2A|9452|integral membrane protein 2A##BC010511|ITM2A|9452|integral membrane protein 2A##AK223327|ITM2A|9452|integral membrane protein 2A##AK303238|ITM2A|9452|integral membrane protein 2A##AF038953|ITM2A|9452|integral membrane protein 2A##BC034485|ITM2A|9452|integral membrane protein 2A##AK313154|ITM2A|9452|integral membrane protein 2A##NM_001171581|ITM2A|9452|integral membrane protein 2A##NM_004867|ITM2A|9452|integral membrane protein 2A	0.665576	CTCF.p2:-6:0.666
chr1	27429315	27429416	reg1004475.p1	12.609	+	TSC_hg19_v1_chr1_-_27339448 AK122816	-89911	-	BC012790 BC014160 NM_052943 TSC_hg19_v1_chr1_-_27339338	-90031	-	TSC_hg19_v1_chr1_+_27320182 NM_001013642 BC069216	-109172	+	M96066 S68616 NM_003047 TSC_hg19_v1_chr1_-_27481521	52096	-	NM_015023 TSC_hg19_v1_chr1_+_27561056	131669	+	TSC_hg19_v1_chr1_+_27561124 AK315564	131762	+	AK122816|FAM46B|115572|family with sequence similarity 46, member B##BC012790|FAM46B|115572|family with sequence similarity 46, member B##BC014160|FAM46B|115572|family with sequence similarity 46, member B##NM_052943|FAM46B|115572|family with sequence similarity 46, member B##NM_001013642|TRNP1|388610|TMF1-regulated nuclear protein 1##BC069216|TRNP1|388610|TMF1-regulated nuclear protein 1##M96066|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##S68616|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_003047|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1	0.980221	CTCF.p2:2:0.980
chr1	53152016	53152120	reg1004969.p2	12.609	+	AK128236 BC041608 NM_001042693	-53028	+	NM_015696 TSC_hg19_v1_chr1_+_53068073 AF320068 AK027683 AY358402 BC032788 DQ890863 DQ894018 CU689540	-84004	+	TSC_hg19_v1_chr1_-_53018765 BC012047 BC018753 BC035820 AK303532 NM_001009881 NM_015269 AK307579 AK095733	-133315	-	TSC_hg19_v1_chr1_-_53164009 BC015313 AK225041	11930	-	TSC_hg19_v1_chr1_-_53164020 AK225087	11949	-	TSC_hg19_v1_chr1_-_53164026 BC005992 AK022501 NM_023077	11962	-	AK128236|FAM159A|348378|family with sequence similarity 159, member A##BC041608|FAM159A|348378|family with sequence similarity 159, member A##NM_001042693|FAM159A|348378|family with sequence similarity 159, member A##NM_015696|GPX7|2882|glutathione peroxidase 7##AF320068|GPX7|2882|glutathione peroxidase 7##AK027683|GPX7|2882|glutathione peroxidase 7##AY358402|GPX7|2882|glutathione peroxidase 7##BC032788|GPX7|2882|glutathione peroxidase 7##DQ890863|GPX6|257202|glutathione peroxidase 6 (olfactory)##DQ894018|GPX7|2882|glutathione peroxidase 7##BC012047|ZCCHC11|23318|zinc finger, CCHC domain containing 11##BC018753|ZCCHC11|23318|zinc finger, CCHC domain containing 11##BC035820|ZCCHC11|23318|zinc finger, CCHC domain containing 11##NM_001009881|ZCCHC11|23318|zinc finger, CCHC domain containing 11##NM_015269|ZCCHC11|23318|zinc finger, CCHC domain containing 11##AK307579|ZCCHC11|23318|zinc finger, CCHC domain containing 11##AK095733|ZCCHC11|23318|zinc finger, CCHC domain containing 11##BC015313|SELRC1|65260|Sel1 repeat containing 1##AK225041|SELRC1|65260|Sel1 repeat containing 1##AK225087|SELRC1|65260|Sel1 repeat containing 1##BC005992|SELRC1|65260|Sel1 repeat containing 1##AK022501|SELRC1|65260|Sel1 repeat containing 1##NM_023077|SELRC1|65260|Sel1 repeat containing 1	0.931792	CTCF.p2:20:0.825
chr1	6464866	6464970	reg1005481.p1	12.609	+	BC017365 AK057168 NM_007274	-11119	-	BT006888 TSC_hg19_v1_chr1_-_6453439 AB074415 AB074416 D88894 AK289572 AK300831	-11507	-	AK290097 AB074417 NM_181864	-19109	-	AB463714 BC132698 BC136963 BC142687 TSC_hg19_v1_chr1_-_6479976 AK091122 NM_019089	15012	-	TSC_hg19_v1_chr1_+_6484835 AL136880 NM_031475	19913	+	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	61284	-	BC017365|ACOT7|11332|acyl-CoA thioesterase 7##AK057168|ACOT7|11332|acyl-CoA thioesterase 7##NM_007274|ACOT7|11332|acyl-CoA thioesterase 7##BT006888|ACOT7|11332|acyl-CoA thioesterase 7##AB074415|ACOT7|11332|acyl-CoA thioesterase 7##AB074416|ACOT7|11332|acyl-CoA thioesterase 7##D88894|ACOT7|11332|acyl-CoA thioesterase 7##AK289572|ACOT7|11332|acyl-CoA thioesterase 7##AK300831|ACOT7|11332|acyl-CoA thioesterase 7##AK290097|ACOT7|11332|acyl-CoA thioesterase 7##AB074417|ACOT7|11332|acyl-CoA thioesterase 7##NM_181864|ACOT7|11332|acyl-CoA thioesterase 7##BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)##NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AL136880|ESPN|83715|espin##NM_031475|ESPN|83715|espin##U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25	0.58222	CTCF.p2:-12:0.582
chr18	44626747	44626867	reg1006322.p1	12.609	+	AK314984 NM_016427 BC036022	-64828	-	NM_145653	-70359	-	BC103912 AB076840 AB464734 BC103913 EU446606 NM_001100817	-70597	-	TSC_hg19_v1_chr18_-_44676865 BC011894 AL136681 BC033031 AK054590 AK292098 BC038100 NM_032124	50064	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	75882	-	TSC_hg19_v1_chr18_-_44702734 AK027108	75926	-	AK314984|TCEB3B|51224|transcription elongation factor B polypeptide 3B (elongin A2)##NM_016427|TCEB3B|51224|transcription elongation factor B polypeptide 3B (elongin A2)##BC036022|TCEB3B|51224|transcription elongation factor B polypeptide 3B (elongin A2)##NM_145653|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##BC103912|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##AB076840|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##BC103913|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##EU446606|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##NM_001100817|TCEB3CL|728929|transcription elongation factor B polypeptide 3C-like##BC011894|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##AL136681|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##BC033031|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##AK054590|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##AK292098|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##BC038100|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##NM_032124|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1	0.849557	CTCF.p2:-17:0.850
chr14	50571783	50571925	reg1006956.p1	12.608	+	AF390030 NM_001014830	-12494	-	AK091232 AX746864 NM_001012706	-97617	-	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-211448	+	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	11416	-	TSC_hg19_v1_chr14_-_50697940 L13858 HQ258542 AB463275 BC117261 BC143366 BC143367	126129	-	AB209277 TSC_hg19_v1_chr14_-_50698111 NM_006939	126246	-	AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D##L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)##HQ258542|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)##AB209277|SOS2|6655|son of sevenless homolog 2 (Drosophila)##NM_006939|SOS2|6655|son of sevenless homolog 2 (Drosophila)	0.724591	CTCF.p2:15:0.725
chr2	11264729	11264829	reg1004611.p1	12.608	+	BC026110 NM_002236 TSC_hg19_v1_chr2_+_11052109	-212694	+	TSC_hg19_v1_chr2_-_10952912 AK294347 D49489 BC001312 NM_005742	-311859	-	TSC_hg19_v1_chr2_-_10952851 DQ891186 DQ894369 AK289428	-311951	-	AK057872 NM_182500 BC120930 AK292828	8437	+	BC027625 NM_152391 TSC_hg19_v1_chr2_+_11295562	30772	+	TSC_hg19_v1_chr2_+_11295592 AK001091	30802	+	BC026110|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##NM_002236|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6##D49489|PDIA6|10130|protein disulfide isomerase family A, member 6##BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6##NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6##AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6##AK057872|C2orf50|130813|chromosome 2 open reading frame 50##NM_182500|C2orf50|130813|chromosome 2 open reading frame 50##BC120930|C2orf50|130813|chromosome 2 open reading frame 50##AK292828|C2orf50|130813|chromosome 2 open reading frame 50##BC027625|PQLC3|130814|PQ loop repeat containing 3##NM_152391|PQLC3|130814|PQ loop repeat containing 3##AK001091|PQLC3|130814|PQ loop repeat containing 3	0.757357	CTCF.p2:7:0.757
chr2	18011900	18012047	reg1007039.p1	12.608	+	NM_001105569	-14188	+	TSC_hg19_v1_chr2_+_17935407 CR936783 NM_001130009 AK093631 AX748233	-76562	+	TSC_hg19_v1_chr2_+_17935163 BC038243 NM_182625 AK131387	-76804	+	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	47981	+	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	729943	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	758837	-	NM_001105569|MSGN1|343930|mesogenin 1##CR936783|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##NM_001130009|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK093631|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##BC038243|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##NM_182625|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK131387|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB	0.362208	CTCF.p2:11:0.362
chr7	71201066	71201174	reg1004269.p1	12.607	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	-603332	+	TSC_hg19_v1_chr7_+_70231164 AK296981	-969915	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-2136532	+	AK123862 TSC_hg19_v1_chr7_-_71801809	600658	-	NM_001017440 TSC_hg19_v1_chr7_-_71802376	601184	-	NM_031468	676239	-	AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK296981|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2##AK123862|CALN1|83698|calneuron 1##NM_001017440|CALN1|83698|calneuron 1##NM_031468|CALN1|83698|calneuron 1	0.999149	CTCF.p2:9:0.999
chr11	46389276	46389380	reg1005742.p1	12.606	+	TSC_hg19_v1_chr11_+_46383155 NM_001105540 U94905	-6193	+	TSC_hg19_v1_chr11_+_46369117 NM_001199266 NM_001199267 NM_001199268 NM_003646 AK225774 U51477 BC041770 AK293615 AK294888 AK312398	-20304	+	TSC_hg19_v1_chr11_+_46367020 AK300577	-22292	+	AK309963 AK308210 TSC_hg19_v1_chr11_+_46402507 AK130889 NM_001012334	13147	+	TSC_hg19_v1_chr11_+_46403232 DQ323888 DQ323889 DQ323890 NM_002391	13892	+	TSC_hg19_v1_chr11_+_46403264 BC011704	13938	+	NM_001105540|DGKZ|8525|diacylglycerol kinase, zeta##U94905|DGKZ|8525|diacylglycerol kinase, zeta##NM_001199266|DGKZ|8525|diacylglycerol kinase, zeta##NM_001199267|DGKZ|8525|diacylglycerol kinase, zeta##NM_001199268|DGKZ|8525|diacylglycerol kinase, zeta##NM_003646|DGKZ|8525|diacylglycerol kinase, zeta##AK225774|DGKZ|8525|diacylglycerol kinase, zeta##U51477|DGKZ|8525|diacylglycerol kinase, zeta##BC041770|DGKZ|8525|diacylglycerol kinase, zeta##AK293615|DGKZ|8525|diacylglycerol kinase, zeta##AK294888|DGKZ|8525|diacylglycerol kinase, zeta##AK312398|DGKZ|8525|diacylglycerol kinase, zeta##AK300577|DGKZ|8525|diacylglycerol kinase, zeta##AK309963|MDK|4192|midkine (neurite growth-promoting factor 2)##AK308210|MDK|4192|midkine (neurite growth-promoting factor 2)##AK130889|MDK|4192|midkine (neurite growth-promoting factor 2)##NM_001012334|MDK|4192|midkine (neurite growth-promoting factor 2)##DQ323888|MDK|4192|midkine (neurite growth-promoting factor 2)##DQ323889|MDK|4192|midkine (neurite growth-promoting factor 2)##DQ323890|MDK|4192|midkine (neurite growth-promoting factor 2)##NM_002391|MDK|4192|midkine (neurite growth-promoting factor 2)##BC011704|MDK|4192|midkine (neurite growth-promoting factor 2)	0.999138	CTCF.p2:0:0.999
chr12	116355132	116355232	reg1005286.p2	12.606	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-1233042	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1508964	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1511258	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	359768	-	TSC_hg19_v1_chr12_-_116715263 AY338463	359978	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	616047	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	1.018522	CTCF.p2:-6:0.994
chr19	54836513	54836631	reg1006388.p1	12.606	+	AF499917 EU915611 EU915612 AF499916 AF499919 AF499918 AF324830 NM_021250 NM_181879 NM_181985 NM_181986	-12197	-	AF014923 AF014924 AF041262 CU688428 DQ891075 DQ894258 AB590305 NM_001172654 U91926 BC028208 AF025527 NM_006865 TSC_hg19_v1_chr19_-_54804279	-32335	-	BC036827 AF283986 AF025528 BC025766 TSC_hg19_v1_chr19_-_54784966 AK297071 AK226015 AK297041 NM_001080978 NM_005874	-51595	-	BC109198 BC109199 NM_012276	13830	-	CR542051 CU693316 DQ892072 DQ895266 AF251509 AF251510 BC027899 AF109683 AF013249 AK309895 TSC_hg19_v1_chr19_-_54876492	39880	-	TSC_hg19_v1_chr19_-_54876541 AK290415 AK315419	39979	-	AF499917|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##EU915611|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##EU915612|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499916|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499919|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499918|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF324830|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_021250|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181879|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181985|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181986|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF014923|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF014924|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF041262|LILRA6|79168|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6##DQ891075|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##DQ894258|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##NM_001172654|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##U91926|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##BC028208|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF025527|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##NM_006865|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##BC036827|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AF283986|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AF025528|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##BC025766|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK297071|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK226015|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK297041|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##NM_001080978|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##NM_005874|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##BC109198|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##BC109199|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##NM_012276|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##CR542051|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##DQ892072|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##DQ895266|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF251509|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF251510|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##BC027899|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF109683|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF013249|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK309895|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK290415|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK315419|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1	0.859607	CTCF.p2:-2:0.860
chr17	72861121	72861242	reg1007801.p1	12.605	+	BC140801 BC144586 AB208799 NM_000835	-5236	-	AL137521 BC037584 TSC_hg19_v1_chr17_+_72832152	-29073	+	NM_017728 AK291159 TSC_hg19_v1_chr17_+_72772637 AK296621 AK000262 AK074029 BC011552 BC037278	-88525	+	BT006684 CU678312 AB463633 AK223530 J03826 AK098648 AK293210 AK301779 BC063493 BC002960 AK298908 AK094120 AK293208 BC018911 BC034763 BC011521 AK295307 NM_004110 NM_024417	7930	-	NM_178128 AY203929 BC117230 AK094411	28540	-	BC101096 BC101097 BC101098 BC101099 AK091243 AK296899 AX746872 NM_173477 AK289804	58118	-	BC140801|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##BC144586|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##AB208799|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##NM_000835|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##AL137521|TMEM104|54868|transmembrane protein 104##NM_017728|TMEM104|54868|transmembrane protein 104##AK291159|TMEM104|54868|transmembrane protein 104##AK296621|TMEM104|54868|transmembrane protein 104##AK000262|TMEM104|54868|transmembrane protein 104##AK074029|TMEM104|54868|transmembrane protein 104##BC011552|TMEM104|54868|transmembrane protein 104##BC037278|TMEM104|54868|transmembrane protein 104##BT006684|FDXR|2232|ferredoxin reductase##AK223530|FDXR|2232|ferredoxin reductase##J03826|FDXR|2232|ferredoxin reductase##AK098648|FDXR|2232|ferredoxin reductase##AK293210|FDXR|2232|ferredoxin reductase##AK301779|FDXR|2232|ferredoxin reductase##BC063493|FDXR|2232|ferredoxin reductase##BC002960|FDXR|2232|ferredoxin reductase##AK298908|FDXR|2232|ferredoxin reductase##AK094120|FDXR|2232|ferredoxin reductase##AK293208|FDXR|2232|ferredoxin reductase##BC018911|FDXR|2232|ferredoxin reductase##BC034763|FDXR|2232|ferredoxin reductase##BC011521|FDXR|2232|ferredoxin reductase##AK295307|FDXR|2232|ferredoxin reductase##NM_004110|FDXR|2232|ferredoxin reductase##NM_024417|FDXR|2232|ferredoxin reductase##NM_178128|FADS6|283985|fatty acid desaturase domain family, member 6##AY203929|FADS6|283985|fatty acid desaturase domain family, member 6##BC117230|FADS6|283985|fatty acid desaturase domain family, member 6##AK094411|FADS6|283985|fatty acid desaturase domain family, member 6##BC101096|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101097|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101098|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101099|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK091243|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK296899|USH1G|124590|Usher syndrome 1G (autosomal recessive)##NM_173477|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK289804|USH1G|124590|Usher syndrome 1G (autosomal recessive)	0.994101	CTCF.p2:0:0.994
chr5	141340404	141340530	reg1007069.p1	12.605	+	AF240635 NM_016580	-1841	-	BC011926 TSC_hg19_v1_chr5_+_141303466 BC035486 BC010452 BC011269 CU680118	-36983	+	TSC_hg19_v1_chr5_+_141303403 NM_001142603 NM_014773 BC007855 D50931 AK292869	-37058	+	NM_001201365 NM_183399 AF060544 BC126185 BC144061	5954	+	NM_004290 NM_183398 NM_183400	7983	+	TSC_hg19_v1_chr5_+_141348669 AK295965 AK057868 AB022663	8198	+	AF240635|PCDH12|51294|protocadherin 12##NM_016580|PCDH12|51294|protocadherin 12##BC011926|KIAA0141|9812|KIAA0141##BC035486|KIAA0141|9812|KIAA0141##BC010452|KIAA0141|9812|KIAA0141##BC011269|KIAA0141|9812|KIAA0141##NM_001142603|KIAA0141|9812|KIAA0141##NM_014773|KIAA0141|9812|KIAA0141##BC007855|KIAA0141|9812|KIAA0141##D50931|KIAA0141|9812|KIAA0141##AK292869|KIAA0141|9812|KIAA0141##NM_001201365|RNF14|9604|ring finger protein 14##NM_183399|RNF14|9604|ring finger protein 14##AF060544|RNF14|9604|ring finger protein 14##BC126185|RNF14|9604|ring finger protein 14##BC144061|RNF14|9604|ring finger protein 14##NM_004290|RNF14|9604|ring finger protein 14##NM_183398|RNF14|9604|ring finger protein 14##NM_183400|RNF14|9604|ring finger protein 14##AK295965|RNF14|9604|ring finger protein 14##AK057868|RNF14|9604|ring finger protein 14##AB022663|RNF14|9604|ring finger protein 14	0.999906	CTCF.p2:3:1.000
chr5	39080820	39080954	reg1007860.p1	12.605	+	TSC_hg19_v1_chr5_-_39074499 AY515854 BC029608 BC137163 BC137164 BC144509 NM_152756	-6390	-	CU688716 DQ891672 DQ894858 TSC_hg19_v1_chr5_-_39074493 AK128358 CR749280	-6402	-	TSC_hg19_v1_chr5_+_38846260 BC125209 BC125210	-234592	+	AF198052 U93049 AF001862 TSC_hg19_v1_chr5_-_39203164	122230	-	BC117449 BC143645 BC015933 BX647195 BX647196 TSC_hg19_v1_chr5_-_39219666 AK130159 AK290403 NM_001465 NM_199335	138742	-	TSC_hg19_v1_chr5_-_39270745 AK297077 NM_001243093	189852	-	AY515854|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC029608|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137163|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137164|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC144509|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##NM_152756|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##DQ891672|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##DQ894858|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AK128358|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##CR749280|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC125209|OSMR|9180|oncostatin M receptor##BC125210|OSMR|9180|oncostatin M receptor##AF198052|FYB|2533|FYN binding protein##U93049|FYB|2533|FYN binding protein##AF001862|FYB|2533|FYN binding protein##BC117449|FYB|2533|FYN binding protein##BC143645|FYB|2533|FYN binding protein##BC015933|FYB|2533|FYN binding protein##BX647195|FYB|2533|FYN binding protein##BX647196|FYB|2533|FYN binding protein##AK130159|FYB|2533|FYN binding protein##AK290403|FYB|2533|FYN binding protein##NM_001465|FYB|2533|FYN binding protein##NM_199335|FYB|2533|FYN binding protein##AK297077|FYB|2533|FYN binding protein##NM_001243093|FYB|2533|FYN binding protein	0.064923	
chr11	44749506	44749640	reg1007172.p1	12.603	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-162346	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-162408	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-417897	-	NM_130783	36402	+	TSC_hg19_v1_chr11_-_44956087 AF010315	206534	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	222844	-	AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_130783|TSPAN18|90139|tetraspanin 18##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11	0.923773	CTCF.p2:-8:0.924
chr15	22461758	22461938	reg1000586.p3	12.603	+	BC136597 BC136598 NM_001005241 DQ786223	-79403	+	BC136985 NM_001004719	-93371	+	NM_207355 BC066981	-378710	-	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	11374	-	AK097517 NM_001001413	274397	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	371622	+	BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5	5.056384	CTCF.p2:-21:0.987	CTCF.p2:33:0.894	CTCF.p2:-41:0.533	CTCF.p2:72:0.947	CTCF.p2:92:0.675	CTCF.p2:-100:0.989
chr8	90701510	90701646	reg1005515.p1	12.603	+	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	-1361832	-	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	-1815319	-	AK093121 AX747937 BC117326 BC117328 NM_173538	-2822905	+	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	68452	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	68706	+	AF061326 NM_004337	212517	+	AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF061326|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_004337|OSGIN2|734|oxidative stress induced growth inhibitor family member 2	0.625362	CTCF.p2:3:0.625
chr19	42148383	42148508	reg1007359.p1	12.602	+	D90276 AK298701 NM_001817	-15011	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	-65868	+	NM_001130514	-199383	+	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	43707	-	TSC_hg19_v1_chr19_+_42212531 NM_004363	64083	+	TSC_hg19_v1_chr19_+_42212544 M29540 AK310844 BC034671 AK223101	64106	+	D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_004363|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M29540|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK310844|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##BC034671|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK223101|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5	1.005652	CTCF.p2:3:0.973
chr6_mann_hap4	4409896	4410019	reg1008288.p1	12.602	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.003703	CTCF.p2:25:0.960
chr12	56334136	56334262	reg1006889.p1	12.601	+	TSC_hg19_v1_chr12_+_56325851 NM_201444 NM_201445 NM_201554 AK309939 AY930112 BC031870 BC023523	-8352	+	AK303320 AK307685 NM_001345 AF064770 AF064771 AK310600	-9186	+	TSC_hg19_v1_chr12_-_56321683 BC006135 NM_032345	-12510	-	BT007202 U01874 EU176186 BC001414 M32295 M77348 S73003 TSC_hg19_v1_chr12_-_56359827 AK300150 NM_001200053 NM_001200054	25620	-	AK092881 AK130180 NM_006928	26277	-	TSC_hg19_v1_chr12_+_56360579 NM_001798 NM_052827 M68520 AK293246 AK291941 X62071 BC003065	26390	+	NM_201444|DGKA|1606|diacylglycerol kinase, alpha 80kDa##NM_201445|DGKA|1606|diacylglycerol kinase, alpha 80kDa##NM_201554|DGKA|1606|diacylglycerol kinase, alpha 80kDa##AK309939|DGKA|1606|diacylglycerol kinase, alpha 80kDa##AY930112|DGKA|1606|diacylglycerol kinase, alpha 80kDa##BC031870|DGKA|1606|diacylglycerol kinase, alpha 80kDa##BC023523|DGKA|1606|diacylglycerol kinase, alpha 80kDa##AK303320|DGKA|1606|diacylglycerol kinase, alpha 80kDa##AK307685|DGKA|1606|diacylglycerol kinase, alpha 80kDa##NM_001345|DGKA|1606|diacylglycerol kinase, alpha 80kDa##AF064770|DGKA|1606|diacylglycerol kinase, alpha 80kDa##AF064771|DGKA|1606|diacylglycerol kinase, alpha 80kDa##AK310600|DGKA|1606|diacylglycerol kinase, alpha 80kDa##BC006135|WIBG|84305|within bgcn homolog (Drosophila)##NM_032345|WIBG|84305|within bgcn homolog (Drosophila)##BT007202|PMEL|6490|premelanosome protein##U01874|PMEL|6490|premelanosome protein##EU176186|PMEL|6490|premelanosome protein##BC001414|PMEL|6490|premelanosome protein##M32295|PMEL|6490|premelanosome protein##M77348|PMEL|6490|premelanosome protein##S73003|PMEL|6490|premelanosome protein##AK300150|PMEL|6490|premelanosome protein##NM_001200053|PMEL|6490|premelanosome protein##NM_001200054|PMEL|6490|premelanosome protein##AK092881|PMEL|6490|premelanosome protein##AK130180|PMEL|6490|premelanosome protein##NM_006928|PMEL|6490|premelanosome protein##NM_001798|CDK2|1017|cyclin-dependent kinase 2##NM_052827|CDK2|1017|cyclin-dependent kinase 2##M68520|CDK2|1017|cyclin-dependent kinase 2##AK293246|CDK2|1017|cyclin-dependent kinase 2##AK291941|CDK2|1017|cyclin-dependent kinase 2##X62071|CDK2|1017|cyclin-dependent kinase 2##BC003065|CDK2|1017|cyclin-dependent kinase 2	0.998166	CTCF.p2:13:0.998
chr3	130611830	130611971	reg1005920.p1	12.601	+	NM_001199180 NM_001199181 NM_001199182 AK296470	-42494	+	BC127105 BC127106 TSC_hg19_v1_chr3_-_130465651 AK314219 BC110318 BC009899 BC017332 BC057239 NM_014602	-146297	-	AM774225 NM_001102608	-332723	+	TSC_hg19_v1_chr3_+_130612841 AB037768 NM_001199179 NM_001001485 NM_001199183 NM_001199184 AF189723 AF225981 AK304175 BC028139 NM_001199185 NM_014382 AF181120 AF181121 AK314342 NM_001001486 NM_001001487 AY268374 AY268375	1245	+	AK301388 BC069265 AK027806 NM_014065 AK294156	133740	-	AK297300 NM_001146003 NM_024800 NM_145910 AK123021 AL833472 AB071996 AB071997 BC026195 AK293261 AK316352	133835	+	NM_001199180|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199181|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199182|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK296470|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##BC127105|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC127106|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AK314219|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC110318|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC009899|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC017332|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC057239|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_014602|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AM774225|COL6A6|131873|collagen, type VI, alpha 6##NM_001102608|COL6A6|131873|collagen, type VI, alpha 6##AB037768|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199179|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001485|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199183|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199184|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF189723|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF225981|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK304175|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##BC028139|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199185|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_014382|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181120|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181121|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK314342|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001486|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001487|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268374|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268375|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK301388|ASTE1|28990|asteroid homolog 1 (Drosophila)##BC069265|ASTE1|28990|asteroid homolog 1 (Drosophila)##AK027806|ASTE1|28990|asteroid homolog 1 (Drosophila)##NM_014065|ASTE1|28990|asteroid homolog 1 (Drosophila)##AK294156|ASTE1|28990|asteroid homolog 1 (Drosophila)##AK297300|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##NM_001146003|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##NM_024800|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##NM_145910|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK123021|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AL833472|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AB071996|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AB071997|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##BC026195|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK293261|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK316352|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11	0.996144	CTCF.p2:20:0.996
chr15	80145960	80146086	reg1006633.p1	12.600	+	AB028947 NM_015206 BC152466	-421164	+	TSC_hg19_v1_chr15_+_79603557 AJ132270 CR457384	-542456	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	-542520	+	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	43357	-	NM_001199758	43603	-	AL109714 NM_001100879	61574	-	AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##AJ132270|TMED3|23423|transmembrane emp24 protein transport domain containing 3##CR457384|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL109714|ST20|400410|suppressor of tumorigenicity 20##NM_001100879|ST20|400410|suppressor of tumorigenicity 20	0.923127	CTCF.p2:11:0.923
chr2	171181208	171181332	reg1005415.p2	12.600	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	-146585	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-497312	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-499885	-	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	390588	+	TSC_hg19_v1_chr2_+_171571942 AB464708	390707	+	TSC_hg19_v1_chr2_+_171572707 BC069026	391440	+	AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##BC069026|SP5|389058|Sp5 transcription factor	0.998176	CTCF.p2:-8:0.998
chr1	246175705	246175819	reg1005413.p1	12.597	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-857454	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-1042079	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-1042132	+	AK024733 NM_022743	404949	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	494792	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	494846	-	AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3	0.69308	CTCF.p2:-5:0.693
chr8	22776022	22776167	reg1007632.p1	12.597	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-225310	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-225589	-	AK294968 AK295834 NM_001199881	-226020	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	9230	-	AK092617 BC034917 NM_001160036	68829	+	NM_001160037	77266	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.997647	CTCF.p2:-4:0.998
chr17	3635583	3635718	reg1007912.p1	12.596	+	TSC_hg19_v1_chr17_+_3627210 AK310546 AK315247 BC036181 NM_031965 AK056691 AB039834 AF289865 BC050662 AK292715 BC016626 BC047457	-8434	+	TSC_hg19_v1_chr17_-_3627077 AF289864	-8548	-	AB209623 BC016917 AK307959 TSC_hg19_v1_chr17_-_3599535 BC008319 AK290889 NM_001204519 NM_001204520 NM_002561 NM_175080	-36058	-	HQ258689 TSC_hg19_v1_chr17_-_3704463	68803	-	TSC_hg19_v1_chr17_-_3704490 BC113436 BC117207 NM_002208	68861	-	TSC_hg19_v1_chr17_-_3749541 NM_001114118 NM_018553	113860	-	BC036181|GSG2|83903|germ cell associated 2 (haspin)##NM_031965|GSG2|83903|germ cell associated 2 (haspin)##AK056691|GSG2|83903|germ cell associated 2 (haspin)##AB039834|GSG2|83903|germ cell associated 2 (haspin)##AF289865|GSG2|83903|germ cell associated 2 (haspin)##BC050662|GSG2|83903|germ cell associated 2 (haspin)##AK292715|GSG2|83903|germ cell associated 2 (haspin)##BC016626|GSG2|83903|germ cell associated 2 (haspin)##BC047457|GSG2|83903|germ cell associated 2 (haspin)##AF289864|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##AB209623|P2RX5-TAX1BP3|100533970|P2RX5-TAX1BP3 readthrough##BC016917|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK307959|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC008319|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK290889|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204519|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204520|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_002561|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_175080|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##HQ258689|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC113436|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC117207|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_002208|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_001114118|C17orf85|55421|chromosome 17 open reading frame 85##NM_018553|C17orf85|55421|chromosome 17 open reading frame 85	0.0	
chr16	1478643	1478767	reg1006780.p1	12.595	+	TSC_hg19_v1_chr16_-_1470746 BC073941 BC063715 BC023590 BC092497	-7970	-	TSC_hg19_v1_chr16_-_1464697 AM944365 BC011924 AK124977 NM_001037125 NM_001193388	-14027	-	TSC_hg19_v1_chr16_-_1429645 BC000150 AK027013 NM_001193389 NM_023076	-49040	-	NM_001010878 AB463766	639	-	NM_001143980	15784	-	CU680387 TSC_hg19_v1_chr16_+_1496635	17928	+	BC023590|C16orf91|283951|chromosome 16 open reading frame 91##BC092497|C16orf91|283951|chromosome 16 open reading frame 91##AM944365|UNKL|64718|unkempt homolog (Drosophila)-like##BC011924|UNKL|64718|unkempt homolog (Drosophila)-like##AK124977|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001037125|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001193388|UNKL|64718|unkempt homolog (Drosophila)-like##BC000150|UNKL|64718|unkempt homolog (Drosophila)-like##AK027013|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001193389|UNKL|64718|unkempt homolog (Drosophila)-like##NM_023076|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001010878|C16orf91|283951|chromosome 16 open reading frame 91##NM_001143980|CCDC154|645811|coiled-coil domain containing 154	0.68989	CTCF.p2:32:0.442
chr20	25379864	25379990	reg1006890.p1	12.595	+	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	-8401	-	CU680756 AK075023 AK290815 AK293495 TSC_hg19_v1_chr20_-_25371426	-8542	-	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	-151169	+	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	8395	+	TSC_hg19_v1_chr20_+_25388342 D80008 AK294593	8423	+	TSC_hg19_v1_chr20_-_25566168 AB023197 EU718622 NM_025176 AK309298	186240	-	BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##AK075023|ABHD12|26090|abhydrolase domain containing 12##AK290815|ABHD12|26090|abhydrolase domain containing 12##AK293495|ABHD12|26090|abhydrolase domain containing 12##NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##D80008|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##AK294593|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##AB023197|NINL|22981|ninein-like##EU718622|NINL|22981|ninein-like##NM_025176|NINL|22981|ninein-like##AK309298|NINL|22981|ninein-like	0.471169	CTCF.p2:22:0.471
chr5	923660	923772	reg1006010.p1	12.595	+	TSC_hg19_v1_chr5_+_892974 NM_001166260 NM_004237 AK310376 BC000404 BC019294 U96131 AB527502 EU446745 CU674196 CR456744 L40384	-30684	+	TSC_hg19_v1_chr5_-_892920 AK299157 NM_023924	-30782	-	AK023503 TSC_hg19_v1_chr5_-_892917	-30801	-	TSC_hg19_v1_chr5_-_997422 AK126199 NM_001242737	73719	-	TSC_hg19_v1_chr5_+_1008916 BC012176 AF358137 AB062887 NM_033120	85317	+	CU675797 AF105365 TSC_hg19_v1_chr5_-_1112151 AK302856 BC098390 BC007760 BC018982 NM_006598	188441	-	NM_001166260|TRIP13|9319|thyroid hormone receptor interactor 13##NM_004237|TRIP13|9319|thyroid hormone receptor interactor 13##AK310376|TRIP13|9319|thyroid hormone receptor interactor 13##BC000404|TRIP13|9319|thyroid hormone receptor interactor 13##BC019294|TRIP13|9319|thyroid hormone receptor interactor 13##U96131|TRIP13|9319|thyroid hormone receptor interactor 13##EU446745|TRIP13|9319|thyroid hormone receptor interactor 13##CR456744|TRIP13|9319|thyroid hormone receptor interactor 13##L40384|TRIP13|9319|thyroid hormone receptor interactor 13##AK299157|BRD9|65980|bromodomain containing 9##NM_023924|BRD9|65980|bromodomain containing 9##AK023503|BRD9|65980|bromodomain containing 9##AK126199|LOC100506688|100506688|uncharacterized LOC100506688##NM_001242737|LOC100506688|100506688|uncharacterized LOC100506688##BC012176|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF358137|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AB062887|NKD2|85409|naked cuticle homolog 2 (Drosophila)##NM_033120|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF105365|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK302856|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC098390|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC007760|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC018982|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##NM_006598|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7	0.985788	CTCF.p2:-12:0.986
chr6	85138159	85138292	reg1007347.p1	12.595	+	AB023226 AK308190 BC063632 NM_014895 TSC_hg19_v1_chr6_-_84937334	-200901	-	TSC_hg19_v1_chr6_+_84743459 AK090775 AX746611 NM_138409 BC010003 AK307078 AK292736 BC039855	-394819	+	TSC_hg19_v1_chr6_+_84569438 AB527313 AM393033	-568761	+	TSC_hg19_v1_chr6_-_85472330 AJ010278	334100	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	334945	-	HQ258462 NM_001080508 BC157841 BC132715	335700	-	AB023226|KIAA1009|22832|KIAA1009##AK308190|KIAA1009|22832|KIAA1009##BC063632|KIAA1009|22832|KIAA1009##NM_014895|KIAA1009|22832|KIAA1009##AK090775|MRAP2|112609|melanocortin 2 receptor accessory protein 2##NM_138409|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC010003|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK307078|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK292736|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC039855|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AM393033|CYB5R4|51167|cytochrome b5 reductase 4##AJ010278|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18##HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18	0.787595	CTCF.p2:-2:0.610
chr16	30441562	30441686	reg1003557.p1	12.594	+	CR457335 TSC_hg19_v1_chr16_-_30441339 AK024843 AF212242 AF210430 AY453409 BC001344 NM_024096	-285	-	TSC_hg19_v1_chr16_+_30419371 AF242768	-22205	+	TSC_hg19_v1_chr16_+_30418926 BC026192 AK311157 AK001405 BC011870	-22583	+	BC016643 BC002381 U43286 TSC_hg19_v1_chr16_-_30457196 AK092003 AK303275 AX747304	15558	-	TSC_hg19_v1_chr16_-_30457197 AK093889 AX748354 NM_012248	15605	-	TSC_hg19_v1_chr16_+_30484003 NM_001114380 NM_002209 AX794822 AX794826 AK314246	42376	+	CR457335|DCTPP1|79077|dCTP pyrophosphatase 1##AK024843|DCTPP1|79077|dCTP pyrophosphatase 1##AF212242|DCTPP1|79077|dCTP pyrophosphatase 1##AF210430|DCTPP1|79077|dCTP pyrophosphatase 1##AY453409|DCTPP1|79077|dCTP pyrophosphatase 1##BC001344|DCTPP1|79077|dCTP pyrophosphatase 1##NM_024096|DCTPP1|79077|dCTP pyrophosphatase 1##AF242768|ZNF771|51333|zinc finger protein 771##BC026192|ZNF771|51333|zinc finger protein 771##BC011870|ZNF771|51333|zinc finger protein 771##BC016643|SEPHS2|22928|selenophosphate synthetase 2##BC002381|SEPHS2|22928|selenophosphate synthetase 2##U43286|SEPHS2|22928|selenophosphate synthetase 2##AK092003|SEPHS2|22928|selenophosphate synthetase 2##AK303275|SEPHS2|22928|selenophosphate synthetase 2##AK093889|SEPHS2|22928|selenophosphate synthetase 2##NM_012248|SEPHS2|22928|selenophosphate synthetase 2##NM_001114380|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##NM_002209|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK314246|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)	0.879319	CTCF.p2:13:0.879
chr6	35208992	35209116	reg1007146.p1	12.594	+	CR936607 TSC_hg19_v1_chr6_+_35200693	-8394	+	TSC_hg19_v1_chr6_+_35182182 AF452494 NM_152753 EU832354 EU832439 AY639608	-26866	+	TSC_hg19_v1_chr6_+_35181732 BC052263 AK291218	-27186	+	AK304626 TSC_hg19_v1_chr6_+_35226727 AB208784	17667	+	TSC_hg19_v1_chr6_+_35227286 AK295276 AK302903	18207	+	TSC_hg19_v1_chr6_+_35227309 AK310877	18252	+	CR936607|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AF452494|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##NM_152753|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##EU832354|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##EU832439|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AY639608|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##BC052263|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AK291218|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AB208784|ZNF76|7629|zinc finger protein 76##AK295276|ZNF76|7629|zinc finger protein 76##AK302903|ZNF76|7629|zinc finger protein 76##AK310877|ZNF76|7629|zinc finger protein 76	0.999929	CTCF.p2:4:1.000
chr9	21318433	21318537	reg1004973.p1	12.593	+	BC093755 BC093757 NM_002169	-13174	-	BC104159 BC104160 BC074956 NM_002172 V00542	-78503	-	M71246 BC096732 BC098355 M11026 NM_021268 M38289	-90263	-	BX538121 BC064958 TSC_hg19_v1_chr9_-_21335388 AB037775 AL713669 BC039133 AK091715 AY172949 NM_018847	16848	-	AB590746 BC069471 BC096697 BC096710 BC096730 BC098357 NM_021002	32400	-	AB464595 CU686802 HQ258738 JN848523 BC093988 BC112002 BC069427 NM_006900	49554	-	BC093755|IFNA5|3442|interferon, alpha 5##BC093757|IFNA5|3442|interferon, alpha 5##NM_002169|IFNA5|3442|interferon, alpha 5##BC104159|IFNA14|3448|interferon, alpha 14##BC104160|IFNA14|3448|interferon, alpha 14##BC074956|IFNA14|3448|interferon, alpha 14##NM_002172|IFNA14|3448|interferon, alpha 14##V00542|IFNA14|3448|interferon, alpha 14##M71246|IFNA17|3451|interferon, alpha 17##BC096732|IFNA17|3451|interferon, alpha 17##BC098355|IFNA17|3451|interferon, alpha 17##M11026|IFNA17|3451|interferon, alpha 17##NM_021268|IFNA17|3451|interferon, alpha 17##M38289|IFNA17|3451|interferon, alpha 17##BX538121|KLHL9|55958|kelch-like 9 (Drosophila)##BC064958|KLHL9|55958|kelch-like 9 (Drosophila)##AB037775|KLHL9|55958|kelch-like 9 (Drosophila)##AL713669|KLHL9|55958|kelch-like 9 (Drosophila)##BC039133|KLHL9|55958|kelch-like 9 (Drosophila)##AK091715|KLHL9|55958|kelch-like 9 (Drosophila)##AY172949|KLHL9|55958|kelch-like 9 (Drosophila)##NM_018847|KLHL9|55958|kelch-like 9 (Drosophila)##BC069471|IFNA6|3443|interferon, alpha 6##BC096697|IFNA6|3443|interferon, alpha 6##BC096710|IFNA6|3443|interferon, alpha 6##BC096730|IFNA6|3443|interferon, alpha 6##BC098357|IFNA6|3443|interferon, alpha 6##NM_021002|IFNA6|3443|interferon, alpha 6##HQ258738|IFNA1|3439|interferon, alpha 1##BC093988|IFNA13|3447|interferon, alpha 13##BC112002|IFNA1|3439|interferon, alpha 1##BC069427|IFNA13|3447|interferon, alpha 13##NM_006900|IFNA13|3447|interferon, alpha 13	0.97552	CTCF.p2:-7:0.976
chr1	246862580	246862715	reg1006985.p1	12.592	+	TSC_hg19_v1_chr1_+_246729853 BX647629 AK074142	-132801	+	TSC_hg19_v1_chr1_+_246729803 AK056563 AL834246	-132842	+	TSC_hg19_v1_chr1_+_246729757 BC036200 BC010228	-132902	+	NM_016002	24730	+	TSC_hg19_v1_chr1_+_246887713 AK075178 BC026185 CU693152 AF151807	25010	+	TSC_hg19_v1_chr1_-_247054277 AL833491	191648	-	BX647629|CNST|163882|consortin, connexin sorting protein##AK074142|CNST|163882|consortin, connexin sorting protein##AK056563|CNST|163882|consortin, connexin sorting protein##AL834246|CNST|163882|consortin, connexin sorting protein##BC036200|CNST|163882|consortin, connexin sorting protein##BC010228|CNST|163882|consortin, connexin sorting protein##NM_016002|SCCPDH|51097|saccharopine dehydrogenase (putative)##AK075178|SCCPDH|51097|saccharopine dehydrogenase (putative)##BC026185|SCCPDH|51097|saccharopine dehydrogenase (putative)##AF151807|SCCPDH|51097|saccharopine dehydrogenase (putative)##AL833491|AHCTF1|25909|AT hook containing transcription factor 1	0.970613	CTCF.p2:4:0.971
chr18	30132521	30132648	reg1007343.p1	12.592	+	AL834491 BC121067 BC121068 AK025263 NM_001242409 NM_022751	-82164	-	TSC_hg19_v1_chr18_-_29993196 D28353	-139389	-	AY695931 NM_005925 X81333 TSC_hg19_v1_chr18_+_29770001 BC136559 BC144244	-362587	+	BC021267 AB037805 NM_020805	220323	-	BC130535 BC144178 BC144179 NM_001105528	887428	-	BC062719 BC091517 AK126038 NM_198995	888075	-	AL834491|FAM59A|64762|family with sequence similarity 59, member A##BC121067|FAM59A|64762|family with sequence similarity 59, member A##BC121068|FAM59A|64762|family with sequence similarity 59, member A##AK025263|FAM59A|64762|family with sequence similarity 59, member A##NM_001242409|FAM59A|64762|family with sequence similarity 59, member A##NM_022751|FAM59A|64762|family with sequence similarity 59, member A##AY695931|MEP1B|4225|meprin A, beta##NM_005925|MEP1B|4225|meprin A, beta##X81333|MEP1B|4225|meprin A, beta##BC136559|MEP1B|4225|meprin A, beta##BC144244|MEP1B|4225|meprin A, beta##BC021267|KLHL14|57565|kelch-like 14 (Drosophila)##AB037805|KLHL14|57565|kelch-like 14 (Drosophila)##NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)##BC130535|C18orf34|374864|chromosome 18 open reading frame 34##BC144178|C18orf34|374864|chromosome 18 open reading frame 34##BC144179|C18orf34|374864|chromosome 18 open reading frame 34##NM_001105528|C18orf34|374864|chromosome 18 open reading frame 34##BC062719|C18orf34|374864|chromosome 18 open reading frame 34##BC091517|C18orf34|374864|chromosome 18 open reading frame 34##AK126038|C18orf34|374864|chromosome 18 open reading frame 34##NM_198995|C18orf34|374864|chromosome 18 open reading frame 34	0.258084	CTCF.p2:4:0.214
chr20	33891744	33891878	reg1007170.p1	12.591	+	BC113483 AK091116 AX746786 NM_178468	-11598	-	TSC_hg19_v1_chr20_-_33872580 BC001119 AF047433 NM_002212 NM_181466 AK314969	-19215	-	NM_181468 TSC_hg19_v1_chr20_-_33872566 AB062289 BC019305 Y11435 AK296076 BC095465 BC011845	-19274	-	BC008871 AB528278 AM392884 AM393853 TSC_hg19_v1_chr20_-_33999777 AK001712 AK022650 AK022742 AK225557 AK293516 AK300130 AK302133 AK308819 BC105791	107958	-	TSC_hg19_v1_chr20_-_33999791 AK225281 AK293149 BC119013 BC122862 AY050659 NM_001184977 NM_018244 NM_199487	108051	-	AB593125 U13660 NM_000557	134179	-	BC113483|FAM83C|128876|family with sequence similarity 83, member C##AK091116|FAM83C|128876|family with sequence similarity 83, member C##NM_178468|FAM83C|128876|family with sequence similarity 83, member C##BC001119|EIF6|3692|eukaryotic translation initiation factor 6##AF047433|EIF6|3692|eukaryotic translation initiation factor 6##NM_002212|EIF6|3692|eukaryotic translation initiation factor 6##NM_181466|EIF6|3692|eukaryotic translation initiation factor 6##AK314969|EIF6|3692|eukaryotic translation initiation factor 6##NM_181468|EIF6|3692|eukaryotic translation initiation factor 6##AB062289|EIF6|3692|eukaryotic translation initiation factor 6##BC019305|EIF6|3692|eukaryotic translation initiation factor 6##Y11435|EIF6|3692|eukaryotic translation initiation factor 6##AK296076|EIF6|3692|eukaryotic translation initiation factor 6##BC095465|EIF6|3692|eukaryotic translation initiation factor 6##BC011845|EIF6|3692|eukaryotic translation initiation factor 6##BC008871|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AM392884|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AM393853|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK001712|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK022650|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK022742|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK225557|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293516|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK300130|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK302133|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK308819|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC105791|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK225281|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293149|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC119013|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC122862|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AY050659|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_001184977|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_018244|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_199487|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AB593125|GDF5|8200|growth differentiation factor 5##U13660|GDF5|8200|growth differentiation factor 5##NM_000557|GDF5|8200|growth differentiation factor 5	0.999403	CTCF.p2:-5:0.999
chr2	71382082	71382201	reg1005593.p1	12.591	+	TSC_hg19_v1_chr2_+_71357768 AK310931 BC041084 X98494	-24356	+	TSC_hg19_v1_chr2_+_71357454 AK056862 NM_005791 BC126389	-24652	+	DQ891375 DQ894553 TSC_hg19_v1_chr2_-_71357360 BC020825 AF364547 NM_032601	-24762	-	TSC_hg19_v1_chr2_-_71454205 AB032981 NM_020459	72089	-	TSC_hg19_v1_chr2_+_71503722 AK303723 AK309221 AK293938	121585	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	176756	+	AK310931|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC041084|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##X98494|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##AK056862|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##NM_005791|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC126389|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##DQ891375|MCEE|84693|methylmalonyl CoA epimerase##DQ894553|MCEE|84693|methylmalonyl CoA epimerase##BC020825|MCEE|84693|methylmalonyl CoA epimerase##AF364547|MCEE|84693|methylmalonyl CoA epimerase##NM_032601|MCEE|84693|methylmalonyl CoA epimerase##AB032981|PAIP2B|400961|poly(A) binding protein interacting protein 2B##NM_020459|PAIP2B|400961|poly(A) binding protein interacting protein 2B##AK303723|ZNF638|27332|zinc finger protein 638##AK309221|ZNF638|27332|zinc finger protein 638##AK293938|ZNF638|27332|zinc finger protein 638##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638	0.0	
chr8	62475912	62476052	reg1007497.p1	12.591	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	-275432	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-884580	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-884694	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	126364	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	151036	-	TSC_hg19_v1_chr8_-_62627152 BC015518 BC025236 AK298577	151156	-	NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase##BC015518|ASPH|444|aspartate beta-hydroxylase##BC025236|ASPH|444|aspartate beta-hydroxylase##AK298577|ASPH|444|aspartate beta-hydroxylase	0.689663	CTCF.p2:14:0.690
chr20	44399904	44400031	reg1006332.p1	12.590	+	AY372173 AY372174 NM_178455	-48980	+	BC121071 BC121072 AF454506 AF454507 NM_172006 NM_172131	-66311	-	AF454505 NM_172005	-69313	+	BC026014 BC102013 BC102014 AF488306 NM_080614	20575	-	NM_052951 TSC_hg19_v1_chr20_+_44420592 AB035676	20623	+	AK314003 TSC_hg19_v1_chr20_+_44420609	20640	+	AY372173|SPINT4|391253|serine peptidase inhibitor, Kunitz type 4##AY372174|SPINT4|391253|serine peptidase inhibitor, Kunitz type 4##NM_178455|SPINT4|391253|serine peptidase inhibitor, Kunitz type 4##BC121071|WFDC10B|280664|WAP four-disulfide core domain 10B##BC121072|WFDC10B|280664|WAP four-disulfide core domain 10B##AF454506|WFDC10B|280664|WAP four-disulfide core domain 10B##AF454507|WFDC10B|280664|WAP four-disulfide core domain 10B##NM_172006|WFDC10B|280664|WAP four-disulfide core domain 10B##NM_172131|WFDC10B|280664|WAP four-disulfide core domain 10B##AF454505|WFDC13|164237|WAP four-disulfide core domain 13##NM_172005|WFDC13|164237|WAP four-disulfide core domain 13##BC026014|WFDC3|140686|WAP four-disulfide core domain 3##BC102013|WFDC3|140686|WAP four-disulfide core domain 3##BC102014|WFDC3|140686|WAP four-disulfide core domain 3##AF488306|WFDC3|140686|WAP four-disulfide core domain 3##NM_080614|WFDC3|140686|WAP four-disulfide core domain 3##NM_052951|DNTTIP1|116092|deoxynucleotidyltransferase, terminal, interacting protein 1##AB035676|DNTTIP1|116092|deoxynucleotidyltransferase, terminal, interacting protein 1##AK314003|DNTTIP1|116092|deoxynucleotidyltransferase, terminal, interacting protein 1	0.999723	CTCF.p2:12:1.000
chr3	182902511	182902629	reg1005291.p1	12.590	+	TSC_hg19_v1_chr3_-_182880523 AB013924 AK313172 BC032940 NM_014398	-22006	-	TSC_hg19_v1_chr3_-_182880435 DQ892118	-22131	-	BC036395 TSC_hg19_v1_chr3_-_182833987	-68647	-	TSC_hg19_v1_chr3_+_182970969 NM_032047 AK074424	68378	+	AB209517 TSC_hg19_v1_chr3_+_182971343	68708	+	TSC_hg19_v1_chr3_+_182971608 AK091474 AX747008	69036	+	AB013924|LAMP3|27074|lysosomal-associated membrane protein 3##AK313172|LAMP3|27074|lysosomal-associated membrane protein 3##BC032940|LAMP3|27074|lysosomal-associated membrane protein 3##NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3##DQ892118|LAMP3|27074|lysosomal-associated membrane protein 3##BC036395|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	0.906653	CTCF.p2:4:0.907
chr5	169527491	169527629	reg1007091.p1	12.590	+	AK055998 NM_001129891	-119817	-	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-463260	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-463316	+	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	5411	+	BC030767 NM_001102609 BC092511	132436	+	BT007273 FN432830 DQ890681 DQ893863 AB527802 TSC_hg19_v1_chr5_-_169724688	197091	-	AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58##BT007273|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##FN432830|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ890681|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ893863|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	0.86348	CTCF.p2:-10:0.863
chr19	50073557	50073668	reg1005084.p2	12.589	+	TSC_hg19_v1_chr19_+_50031259 AY358423 BC013436	-42351	+	AY195859 NM_020650	-42738	+	TSC_hg19_v1_chr19_+_50016643 AK075510 BC020421 AK299124 AB463631 DQ893544 DQ893808 BT006828	-56980	+	BC047314 TSC_hg19_v1_chr19_-_50083811 BC009299 BC010077 NM_015953 AK092444 AX747549 AK291535 AK300720	10189	-	AF132959 TSC_hg19_v1_chr19_-_50083814	10202	-	NM_000951 BC026032	10995	+	AY358423|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##BC013436|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##AY195859|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##NM_020650|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##AK075510|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BC020421|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##AK299124|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##DQ893544|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##DQ893808|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BT006828|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BC047314|NOSIP|51070|nitric oxide synthase interacting protein##BC009299|NOSIP|51070|nitric oxide synthase interacting protein##BC010077|NOSIP|51070|nitric oxide synthase interacting protein##NM_015953|NOSIP|51070|nitric oxide synthase interacting protein##AK092444|NOSIP|51070|nitric oxide synthase interacting protein##AK291535|NOSIP|51070|nitric oxide synthase interacting protein##AK300720|NOSIP|51070|nitric oxide synthase interacting protein##AF132959|NOSIP|51070|nitric oxide synthase interacting protein##NM_000951|PRRG2|5639|proline rich Gla (G-carboxyglutamic acid) 2##BC026032|PRRG2|5639|proline rich Gla (G-carboxyglutamic acid) 2	1.43726	CTCF.p2:22:0.452	CTCF.p2:-60:0.985
chr3	188988150	188988276	reg1004881.p1	12.589	+	AK125682 NM_198485 BC101550 BC101552	-98402	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-323243	+	NM_001167671 BC130584 BC144076	-1044979	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	361046	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	519305	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	850482	-	AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1	0.0	
chr9	134615545	134615643	reg1003397.p1	12.589	+	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	-304	-	D21239 NM_005312	-2670	-	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	-30392	-	Z36848 AF104252 AF230382 DQ099387 AB527898 EU446747 TSC_hg19_v1_chr9_-_134955238 BC064608 BC070331	339555	-	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	339656	-	TSC_hg19_v1_chr9_+_135037083 AY358165	421497	+	EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##Z36848|MED27|9442|mediator complex subunit 27##AF104252|MED27|9442|mediator complex subunit 27##AF230382|MED27|9442|mediator complex subunit 27##DQ099387|MED27|9442|mediator complex subunit 27##EU446747|MED27|9442|mediator complex subunit 27##BC064608|MED27|9442|mediator complex subunit 27##BC070331|MED27|9442|mediator complex subunit 27##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AY358165|NTNG2|84628|netrin G2	1.478234	CTCF.p2:10:0.389	CTCF.p2:-78:0.980
chr2	160778445	160778564	reg1006042.p1	12.588	+	NM_001198759 NM_001198760 NM_002349 TSC_hg19_v1_chr2_-_160761270	-17214	-	AF064827 AY184222 AY314006 TSC_hg19_v1_chr2_-_160761248 AF011333 AK310678 BC057232	-17278	-	TSC_hg19_v1_chr2_-_160654754 AK304422 AY314007 NM_001198763 NM_001198764 NM_014880	-123748	-	BC140823 BC144631 TSC_hg19_v1_chr2_-_160919021	140475	-	U17033 U17034 NM_001007267 NM_001195641 NM_007366 TSC_hg19_v1_chr2_-_160919148	140631	-	AB463075 AM393800 M35198 NM_000888 BC121178 BC143656	278083	-	NM_001198759|LY75-CD302|100526664|LY75-CD302 readthrough##NM_001198760|LY75-CD302|100526664|LY75-CD302 readthrough##NM_002349|LY75|4065|lymphocyte antigen 75##AF064827|LY75|4065|lymphocyte antigen 75##AY184222|LY75-CD302|100526664|LY75-CD302 readthrough##AY314006|LY75-CD302|100526664|LY75-CD302 readthrough##AF011333|LY75|4065|lymphocyte antigen 75##AK310678|LY75|4065|lymphocyte antigen 75##BC057232|LY75|4065|lymphocyte antigen 75##AK304422|CD302|9936|CD302 molecule##AY314007|CD302|9936|CD302 molecule##NM_001198763|CD302|9936|CD302 molecule##NM_001198764|CD302|9936|CD302 molecule##NM_014880|CD302|9936|CD302 molecule##BC140823|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC144631|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##U17033|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##U17034|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001007267|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001195641|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_007366|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##AM393800|ITGB6|3694|integrin, beta 6##M35198|ITGB6|3694|integrin, beta 6##NM_000888|ITGB6|3694|integrin, beta 6##BC121178|ITGB6|3694|integrin, beta 6##BC143656|ITGB6|3694|integrin, beta 6	0.942237	CTCF.p2:-1:0.942
chr2	63002329	63002447	reg1005889.p1	12.588	+	BC029477 NM_001142614	-68358	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	-69422	+	AK292545 NM_001142615	-101403	+	NM_001199770	274803	+	NM_014562 TSC_hg19_v1_chr2_+_63277964 AK095680 AK297308 BC007621	275577	+	TSC_hg19_v1_chr2_-_63815560 AK310290	813152	-	BC029477|EHBP1|23301|EH domain binding protein 1##NM_001142614|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##NM_001199770|OTX1|5013|orthodenticle homeobox 1##NM_014562|OTX1|5013|orthodenticle homeobox 1##AK095680|OTX1|5013|orthodenticle homeobox 1##AK297308|OTX1|5013|orthodenticle homeobox 1##BC007621|OTX1|5013|orthodenticle homeobox 1##AK310290|WDPCP|51057|WD repeat containing planar cell polarity effector	0.0	
chr3	4753198	4753334	reg1005354.p1	12.587	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-218070	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-218138	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-218235	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	267850	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	267915	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	268088	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.992865	CTCF.p2:-15:0.993
chr12	42766114	42766223	reg1005160.p1	12.586	+	AK129910 AK303612 NM_001143787 NM_001143788 NM_001143789 NM_016488 NM_201438 NM_201439 NM_201440 NM_201515 TSC_hg19_v1_chr12_+_42719974 AY157850 AK055690 AK056622 AK299951 AY039238 AK303680 AF151066 AK308022 AK299682 BC015322 BC025306 BC039832 BC040449 AF151040 BC033753	-46190	+	AK308244 TSC_hg19_v1_chr12_-_42719921 BC005099 BC010177 BC022543 AB062361 NM_033114	-46293	-	NM_001190979 NM_001190980 NM_005748 TSC_hg19_v1_chr12_-_42632167	-133997	-	TSC_hg19_v1_chr12_-_42877418 AK122877 NM_001144881	111248	-	AK122881 TSC_hg19_v1_chr12_-_42877772	111590	-	TSC_hg19_v1_chr12_-_42877811 NM_001144882 NM_001144883	111631	-	AK129910|PPHLN1|51535|periphilin 1##AK303612|PPHLN1|51535|periphilin 1##NM_001143787|PPHLN1|51535|periphilin 1##NM_001143788|PPHLN1|51535|periphilin 1##NM_001143789|PPHLN1|51535|periphilin 1##NM_016488|PPHLN1|51535|periphilin 1##NM_201438|PPHLN1|51535|periphilin 1##NM_201439|PPHLN1|51535|periphilin 1##NM_201440|PPHLN1|51535|periphilin 1##NM_201515|PPHLN1|51535|periphilin 1##AY157850|PPHLN1|51535|periphilin 1##AK055690|PPHLN1|51535|periphilin 1##AK056622|PPHLN1|51535|periphilin 1##AK299951|PPHLN1|51535|periphilin 1##AY039238|PPHLN1|51535|periphilin 1##AK303680|PPHLN1|51535|periphilin 1##AF151066|PPHLN1|51535|periphilin 1##AK308022|PPHLN1|51535|periphilin 1##BC015322|PPHLN1|51535|periphilin 1##BC025306|PPHLN1|51535|periphilin 1##BC039832|PPHLN1|51535|periphilin 1##BC040449|PPHLN1|51535|periphilin 1##AF151040|PPHLN1|51535|periphilin 1##AK308244|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC005099|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC010177|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC022543|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##AB062361|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##NM_033114|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##NM_001190979|YAF2|10138|YY1 associated factor 2##NM_001190980|YAF2|10138|YY1 associated factor 2##NM_005748|YAF2|10138|YY1 associated factor 2##AK122877|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)	0.997965	CTCF.p2:12:0.998
chr5	188819	188938	reg1005252.p1	12.586	+	AB067496 NM_052909 AB527247	-48482	+	None	None	None	None	None	None	NM_001080478	2747	+	TSC_hg19_v1_chr5_-_218264 AK098567 BC015349 NM_145265	29396	-	NM_004168 TSC_hg19_v1_chr5_+_218425 BC041016	29512	+	AB067496|PLEKHG4B|153478|pleckstrin homology domain containing, family G (with RhoGef domain) member 4B##NM_052909|PLEKHG4B|153478|pleckstrin homology domain containing, family G (with RhoGef domain) member 4B##NM_001080478|LRRC14B|389257|leucine rich repeat containing 14B##AK098567|CCDC127|133957|coiled-coil domain containing 127##BC015349|CCDC127|133957|coiled-coil domain containing 127##NM_145265|CCDC127|133957|coiled-coil domain containing 127##NM_004168|SDHA|6389|succinate dehydrogenase complex, subunit A, flavoprotein (Fp)##BC041016|SDHA|6389|succinate dehydrogenase complex, subunit A, flavoprotein (Fp)	0.038004	
chr7	140353323	140353466	reg1005144.p1	12.586	+	AB033103 TSC_hg19_v1_chr7_-_140340614	-12784	-	BC132875 BC144190 NM_015689	-51068	-	TSC_hg19_v1_chr7_-_140179348 NM_001145125 NM_013446	-174044	-	TSC_hg19_v1_chr7_+_140372910 AF131745 AY302592 NM_052853 BC014107	19544	+	TSC_hg19_v1_chr7_+_140396507 AF067166 NM_004546 AF050639 BC063026 BC001168 CR542121	43109	+	TSC_hg19_v1_chr7_-_140624512 AB529216 AK314346 BC101757 BC112079 M95712 NM_004333	271113	-	AB033103|DENND2A|27147|DENN/MADD domain containing 2A##BC132875|DENND2A|27147|DENN/MADD domain containing 2A##BC144190|DENND2A|27147|DENN/MADD domain containing 2A##NM_015689|DENND2A|27147|DENN/MADD domain containing 2A##NM_001145125|MKRN1|23608|makorin ring finger protein 1##NM_013446|MKRN1|23608|makorin ring finger protein 1##AF131745|ADCK2|90956|aarF domain containing kinase 2##AY302592|ADCK2|90956|aarF domain containing kinase 2##NM_052853|ADCK2|90956|aarF domain containing kinase 2##BC014107|ADCK2|90956|aarF domain containing kinase 2##AF067166|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##NM_004546|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF050639|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC063026|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC001168|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##CR542121|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AK314346|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC101757|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC112079|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##M95712|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##NM_004333|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1	0.999602	CTCF.p2:5:1.000
chr2	223182795	223182932	reg1007778.p1	12.585	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	-19338	-	AK057009 NM_153038 BC109388	-19951	+	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	-23843	-	TSC_hg19_v1_chr2_+_223289261 AK314322	106377	+	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	106444	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	337931	-	EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK314322|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit	0.105014	
chr17	48929570	48929732	reg1006044.p1	12.584	+	NM_175575	-17047	+	AF147357 TSC_hg19_v1_chr17_+_48821111	-108541	+	TSC_hg19_v1_chr17_+_48796963 NM_006107 NM_016424 AK290540 AK225980 AK023672 BC047043 BC056409 BC002925 AK295983 DQ013876 AK001925	-132658	+	TSC_hg19_v1_chr17_-_48943716 BC070493 BC098415 NM_001243885 NM_005749	14045	-	AK313904 NM_001243877	15687	-	TSC_hg19_v1_chr17_-_49124138 BC007524 BC059946 AK299553 AK307793 AK295098 AK309214 AK024068 NM_001251971	194577	-	NM_175575|WFIKKN2|124857|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2##AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_006107|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_016424|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK290540|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK225980|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK023672|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC047043|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC056409|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC002925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK295983|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##DQ013876|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK001925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC070493|TOB1|10140|transducer of ERBB2, 1##BC098415|TOB1|10140|transducer of ERBB2, 1##NM_001243885|TOB1|10140|transducer of ERBB2, 1##NM_005749|TOB1|10140|transducer of ERBB2, 1##AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1##BC007524|SPAG9|9043|sperm associated antigen 9##BC059946|SPAG9|9043|sperm associated antigen 9##AK299553|SPAG9|9043|sperm associated antigen 9##AK307793|SPAG9|9043|sperm associated antigen 9##AK295098|SPAG9|9043|sperm associated antigen 9##AK309214|SPAG9|9043|sperm associated antigen 9##AK024068|SPAG9|9043|sperm associated antigen 9##NM_001251971|SPAG9|9043|sperm associated antigen 9	0.064884	
chr11	33087253	33087367	reg1005623.p1	12.583	+	NM_001145541 AK002198	-25742	+	TSC_hg19_v1_chr11_+_33061291 BC030582	-25988	+	NM_018393 AK090646 TSC_hg19_v1_chr11_+_33061117 BC041696	-26228	+	AB527773 CU679493 BC059948 TSC_hg19_v1_chr11_-_33183016 U15782 BC108319 BC009792 AK297371 AK290836 NM_001033505 NM_001033506 NM_001326	95666	-	NM_001048200 NM_005734 TSC_hg19_v1_chr11_+_33279272 Y09306 AF305239	191975	+	TSC_hg19_v1_chr11_+_33279873 AK293009	192559	+	NM_001145541|TCP11L1|55346|t-complex 11 (mouse)-like 1##AK002198|TCP11L1|55346|t-complex 11 (mouse)-like 1##BC030582|TCP11L1|55346|t-complex 11 (mouse)-like 1##NM_018393|TCP11L1|55346|t-complex 11 (mouse)-like 1##AK090646|TCP11L1|55346|t-complex 11 (mouse)-like 1##BC041696|TCP11L1|55346|t-complex 11 (mouse)-like 1##BC059948|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##U15782|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##BC108319|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##BC009792|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##AK297371|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##AK290836|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##NM_001033505|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##NM_001033506|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##NM_001326|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##NM_001048200|HIPK3|10114|homeodomain interacting protein kinase 3##NM_005734|HIPK3|10114|homeodomain interacting protein kinase 3##Y09306|HIPK3|10114|homeodomain interacting protein kinase 3##AF305239|HIPK3|10114|homeodomain interacting protein kinase 3##AK293009|HIPK3|10114|homeodomain interacting protein kinase 3	0.999631	CTCF.p2:13:1.000
chr5	131399230	131399368	reg1007050.p1	12.583	+	M20137 NM_000588 BC069472 BC066272 BC066273 BC066274 BC066275 BC066276 M17115 M14743 CU686832 HQ448457	-2927	+	AK314452 BC047453 NM_001205248 NM_001205251 BC026161 NM_001205250 DQ655980	-51606	-	AB385389 AB020644 TSC_hg19_v1_chr5_-_131347331 AK294291 NM_001009185 NM_001205247 NM_015256	-51998	-	M11220 NM_000758 BC113924 BC113999 BC108724 M11734 M10663 AY720441 AB591004 AF510855	10226	+	NM_001017973 NM_004199 BC017062	163644	-	TSC_hg19_v1_chr5_-_131563545 AY358970 BC025960 BC035813 BX647924 NM_001017974 NM_001142598 NM_001142599	164219	-	M20137|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##NM_000588|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC069472|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066272|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066273|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066274|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066275|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066276|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M17115|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M14743|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##HQ448457|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##AK314452|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC047453|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205248|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205251|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC026161|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205250|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##DQ655980|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##AB020644|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##AK294291|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001009185|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205247|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_015256|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##M11220|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_000758|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113924|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113999|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC108724|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M11734|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M10663|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AY720441|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AF510855|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_001017973|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_004199|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC017062|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##AY358970|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC025960|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC035813|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BX647924|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001017974|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142598|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142599|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II	0.929487	CTCF.p2:6:0.929
chr14	93153344	93153471	reg1005345.p1	12.582	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	-34584	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	-34771	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-173448	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	61552	-	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	107279	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	236037	+	AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)	0.999311	CTCF.p2:4:0.999
chr1	22747077	22747184	reg1006278.p1	12.581	+	AY009398 BT020125 AB590593 AB061675 AY358947 AF316543 NM_030761 BC057781	-277619	-	TSC_hg19_v1_chr1_+_22379812 AL121737	-367325	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	-367960	+	AK091019 AK095273 AX746732 NM_001083621 NM_014870 TSC_hg19_v1_chr1_+_22778343	31214	+	TSC_hg19_v1_chr1_+_22778350 AB007947 BC114607	31296	+	TSC_hg19_v1_chr1_+_22889990 BC072417 NM_001006943 NM_020526 BC038796 AB527136	142926	+	AY009398|WNT4|54361|wingless-type MMTV integration site family, member 4##BT020125|WNT4|54361|wingless-type MMTV integration site family, member 4##AB061675|WNT4|54361|wingless-type MMTV integration site family, member 4##AY358947|WNT4|54361|wingless-type MMTV integration site family, member 4##AF316543|WNT4|54361|wingless-type MMTV integration site family, member 4##NM_030761|WNT4|54361|wingless-type MMTV integration site family, member 4##BC057781|WNT4|54361|wingless-type MMTV integration site family, member 4##AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40##AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40##AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40##BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40##BC072417|EPHA8|2046|EPH receptor A8##NM_001006943|EPHA8|2046|EPH receptor A8##NM_020526|EPHA8|2046|EPH receptor A8##BC038796|EPHA8|2046|EPH receptor A8	0.298866	CTCF.p2:-8:0.299
chr1	35667827	35667947	reg1006895.p1	12.581	+	NM_005066 TSC_hg19_v1_chr1_-_35658747 BC051192	-9142	-	BC027717 TSC_hg19_v1_chr1_-_35658734 BC000546 BC027708 X70944 AK307985	-9151	-	BC004534 TSC_hg19_v1_chr1_-_35658589	-9342	-	TSC_hg19_v1_chr1_+_35734567 AK308320 NM_005095	66675	+	TSC_hg19_v1_chr1_+_35734624 BC127113 BC127114 AB587559	66741	+	BX648067 TSC_hg19_v1_chr1_+_35851133	183230	+	NM_005066|SFPQ|6421|splicing factor proline/glutamine-rich##BC051192|SFPQ|6421|splicing factor proline/glutamine-rich##BC027717|SFPQ|6421|splicing factor proline/glutamine-rich##BC000546|SFPQ|6421|splicing factor proline/glutamine-rich##BC027708|SFPQ|6421|splicing factor proline/glutamine-rich##X70944|SFPQ|6421|splicing factor proline/glutamine-rich##AK307985|SFPQ|6421|splicing factor proline/glutamine-rich##BC004534|SFPQ|6421|splicing factor proline/glutamine-rich##AK308320|ZMYM4|9202|zinc finger, MYM-type 4##NM_005095|ZMYM4|9202|zinc finger, MYM-type 4##BC127113|ZMYM4|9202|zinc finger, MYM-type 4##BC127114|ZMYM4|9202|zinc finger, MYM-type 4##BX648067|ZMYM4|9202|zinc finger, MYM-type 4	0.086328	
chr22	31709378	31709515	reg1008586.p1	12.581	+	AB489144 CU013051 CU013339 CR456340 GU135609 AK226089 TSC_hg19_v1_chr22_-_31688475 AK300990 AF528079 AF528080 BC011049 AK074688 AK299397 NM_001135911 NM_052880	-21022	-	TSC_hg19_v1_chr22_-_31686709 BC041903 AK093768	-22723	-	TSC_hg19_v1_chr22_+_31644372 AK314391 AK293774 AL117466 D85527 BC013051	-65026	+	TSC_hg19_v1_chr22_-_31741603 AL096880 CU013210 CU013498 AB384725 AF242522 CR456613	32179	-	AK291803 TSC_hg19_v1_chr22_-_31741928 BC021091	32419	-	AF254082 AF254083 AF254084 AF254085 AF119256 NM_014323 NM_032050 NM_032051 NM_032052 TSC_hg19_v1_chr22_-_31742310 AB208787	32819	-	CR456340|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##GU135609|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK226089|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK300990|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AF528079|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AF528080|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##BC011049|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK074688|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK299397|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##NM_001135911|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##NM_052880|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##BC041903|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK093768|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK314391|LIMK2|3985|LIM domain kinase 2##AK293774|LIMK2|3985|LIM domain kinase 2##AL117466|LIMK2|3985|LIM domain kinase 2##D85527|LIMK2|3985|LIM domain kinase 2##BC013051|LIMK2|3985|LIM domain kinase 2##AL096880|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF242522|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##CR456613|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AK291803|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##BC021091|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF254082|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF254083|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF254084|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF254085|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF119256|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##NM_014323|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##NM_032050|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##NM_032051|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##NM_032052|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AB208787|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	0.997111	CTCF.p2:-4:0.997
chr5	35003579	35003724	reg1006782.p1	12.581	+	TSC_hg19_v1_chr5_+_34929697 AY177688 AY258422 BC065745 NM_001012339 NM_194283	-73959	+	AK303311 TSC_hg19_v1_chr5_+_34915820 AK001962 BC006014 BC001546 NM_018321 AK289610 BX648902 DQ892108 DQ895302 AF347667 AY364243 AY364244	-87839	+	TSC_hg19_v1_chr5_-_34915716 AK002112 NM_002853	-87905	-	NM_031900	44588	-	NM_001204314 NM_001204315 NM_001204316 NM_001204317 NM_001204318	114572	-	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	226926	-	AY177688|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##AY258422|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##BC065745|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_001012339|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_194283|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##AK303311|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AK001962|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##BC006014|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##BC001546|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##NM_018321|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AK289610|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##BX648902|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##DQ892108|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##DQ895302|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AF347667|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AY364243|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AY364244|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AK002112|RAD1|5810|RAD1 homolog (S. pombe)##NM_002853|RAD1|5810|RAD1 homolog (S. pombe)##NM_031900|AGXT2|64902|alanine--glyoxylate aminotransferase 2##NM_001204314|PRLR|5618|prolactin receptor##NM_001204315|PRLR|5618|prolactin receptor##NM_001204316|PRLR|5618|prolactin receptor##NM_001204317|PRLR|5618|prolactin receptor##NM_001204318|PRLR|5618|prolactin receptor##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor	0.99904	CTCF.p2:2:0.999
chr8	81152953	81153082	reg1006423.p1	12.581	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-69247	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-159988	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	-210515	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	245467	+	AK131274 NM_001033723	633998	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	871297	-	BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1	0.0	
chr13	109798039	109798169	reg1006603.p1	12.580	+	AB290159 AK127806 NM_001198950	-516535	+	AB020672 BC146791 NM_015011 AL834447	-549590	+	DQ857728 TSC_hg19_v1_chr13_+_108955871	-842287	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	640804	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	1004631	-	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	1161405	-	AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1	0.051563	
chr17	58189200	58189328	reg1005330.p1	12.580	+	TSC_hg19_v1_chr17_-_58156283 AK127708 AK314655 BC119771 BC119813 BX640819 BX640831 CR627418 NM_022070 AF349752	-32910	-	BC006971 TSC_hg19_v1_chr17_-_58042099 AK294806 AK296197 NM_016125	-147157	-	TSC_hg19_v1_chr17_-_58042085 AK295162 BC088365	-147186	-	TSC_hg19_v1_chr17_-_58213006 AK311448	23747	-	TSC_hg19_v1_chr17_+_58227302 BC057792 NM_000717 AK289715 AK298710	38026	+	TSC_hg19_v1_chr17_+_58227333 BC069649 M83670 BC074768 CR541766 CU691238	38098	+	AK127708|HEATR6|63897|HEAT repeat containing 6##AK314655|HEATR6|63897|HEAT repeat containing 6##BC119771|HEATR6|63897|HEAT repeat containing 6##BC119813|HEATR6|63897|HEAT repeat containing 6##BX640819|HEATR6|63897|HEAT repeat containing 6##BX640831|HEATR6|63897|HEAT repeat containing 6##CR627418|HEATR6|63897|HEAT repeat containing 6##NM_022070|HEATR6|63897|HEAT repeat containing 6##AF349752|HEATR6|63897|HEAT repeat containing 6##BC006971|RNFT1|51136|ring finger protein, transmembrane 1##AK294806|RNFT1|51136|ring finger protein, transmembrane 1##AK296197|RNFT1|51136|ring finger protein, transmembrane 1##NM_016125|RNFT1|51136|ring finger protein, transmembrane 1##AK295162|RNFT1|51136|ring finger protein, transmembrane 1##BC088365|RNFT1|51136|ring finger protein, transmembrane 1##BC057792|CA4|762|carbonic anhydrase IV##NM_000717|CA4|762|carbonic anhydrase IV##AK289715|CA4|762|carbonic anhydrase IV##AK298710|CA4|762|carbonic anhydrase IV##BC069649|CA4|762|carbonic anhydrase IV##M83670|CA4|762|carbonic anhydrase IV##BC074768|CA4|762|carbonic anhydrase IV##CR541766|CA4|762|carbonic anhydrase IV	0.989419	CTCF.p2:-21:0.989
chr18	60650010	60650135	reg1006861.p1	12.580	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-265764	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-266146	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	-267408	+	TSC_hg19_v1_chr18_-_60795898 AF401211	145863	-	BC027258 NM_000633 NM_000657	336488	-	TSC_hg19_v1_chr18_-_60986977 X06487	336921	-	BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2	0.99329	CTCF.p2:13:0.993
chr5	73198510	73198655	reg1005128.p1	12.580	+	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	-89232	+	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	-276597	+	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	-337000	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	737881	-	AK096578 NM_003633	738666	-	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	782426	+	AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)	0.998116	CTCF.p2:-13:0.998
chr6	159379894	159380005	reg1006453.p1	12.580	+	NM_001195032	-70331	+	TSC_hg19_v1_chr6_-_159240446 NM_001111077	-139493	-	TSC_hg19_v1_chr6_-_159240401 AK296738	-139536	-	TSC_hg19_v1_chr6_-_159420766 BC035675	40820	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	40870	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	41272	-	NM_001195032|C6orf99|100130967|chromosome 6 open reading frame 99##NM_001111077|EZR|7430|ezrin##AK296738|EZR|7430|ezrin##BC035675|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)	0.778504	CTCF.p2:23:0.779
chr6	36328361	36328508	reg1005388.p1	12.580	+	BC140873 BX648558 NM_001010903 TSC_hg19_v1_chr6_-_36304663	-23809	-	AM182887 FJ457781 NM_001145717	-90198	+	AK096074 NM_173676 BC103905 BC103906 BC103907 NM_001145716	-117473	+	AF175387 AF218365 AF116508 AF116509 AF116510 AF218235 AF218366 BC035853 AK301011 AF147782 AK223424 AJ276205 AK026144 NM_001207038 AK303829 NM_001207035 NM_001207036 NM_001207037 NM_001207039 NM_001207040 NM_001207041 NM_016135	27025	-	BC031105 NM_152990	82231	-	AY305862 NM_173562 TSC_hg19_v1_chr6_+_36410797 AK295717 AK316456	82236	+	BC140873|C6orf222|389384|chromosome 6 open reading frame 222##BX648558|C6orf222|389384|chromosome 6 open reading frame 222##NM_001010903|C6orf222|389384|chromosome 6 open reading frame 222##AM182887|PNPLA1|285848|patatin-like phospholipase domain containing 1##FJ457781|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145717|PNPLA1|285848|patatin-like phospholipase domain containing 1##AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1##AF175387|ETV7|51513|ets variant 7##AF218365|ETV7|51513|ets variant 7##AF116508|ETV7|51513|ets variant 7##AF116509|ETV7|51513|ets variant 7##AF116510|ETV7|51513|ets variant 7##AF218235|ETV7|51513|ets variant 7##AF218366|ETV7|51513|ets variant 7##BC035853|ETV7|51513|ets variant 7##AK301011|ETV7|51513|ets variant 7##AF147782|ETV7|51513|ets variant 7##AK223424|ETV7|51513|ets variant 7##AJ276205|ETV7|51513|ets variant 7##AK026144|ETV7|51513|ets variant 7##NM_001207038|ETV7|51513|ets variant 7##AK303829|ETV7|51513|ets variant 7##NM_001207035|ETV7|51513|ets variant 7##NM_001207036|ETV7|51513|ets variant 7##NM_001207037|ETV7|51513|ets variant 7##NM_001207039|ETV7|51513|ets variant 7##NM_001207040|ETV7|51513|ets variant 7##NM_001207041|ETV7|51513|ets variant 7##NM_016135|ETV7|51513|ets variant 7##BC031105|PXT1|222659|peroxisomal, testis specific 1##NM_152990|PXT1|222659|peroxisomal, testis specific 1##AY305862|KCTD20|222658|potassium channel tetramerisation domain containing 20##NM_173562|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK295717|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK316456|KCTD20|222658|potassium channel tetramerisation domain containing 20	0.98492	CTCF.p2:21:0.985
chr7	21608517	21608646	reg1007171.p1	12.580	+	AJ320497 NM_003777	-25749	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-140257	+	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	-140762	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	376901	-	AL833195 NM_012294	787940	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	931266	-	AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B	0.361363	CTCF.p2:12:0.361
chr1	149431204	149431310	reg1005025.p1	12.579	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	-32061	-	NM_001164261 NM_001164262	-625243	+	NM_001102663 AK290302 AY894562 AY894566	-691756	+	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	121766	+	X14355 AK311303 NM_000566 X14356 AK291451 BC032634 AB527585 BC152383 CU689454 DQ890842 DQ893997 L03418	323015	+	BC110793 AK289664 AK299108 AK296916 NM_001024599 NM_001161334	352661	-	BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##X14355|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##NM_000566|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##X14356|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK291451|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC032634|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC152383|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ890842|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ893997|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##L03418|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##AK289664|HIST2H2BF|440689|histone cluster 2, H2bf##AK299108|HIST2H2BF|440689|histone cluster 2, H2bf##AK296916|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001161334|HIST2H2BF|440689|histone cluster 2, H2bf	0.994975	CTCF.p2:-7:0.995
chr5	158533921	158534039	reg1004936.p2	12.579	+	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	-7238	-	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	-7523	-	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1247890	-	AK304228 NM_001199382	100668	-	AK056513 NM_144726	100853	-	AK311433 AK304435 NM_001199381	101129	-	BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145##AK056513|RNF145|153830|ring finger protein 145##NM_144726|RNF145|153830|ring finger protein 145##AK311433|RNF145|153830|ring finger protein 145##AK304435|RNF145|153830|ring finger protein 145##NM_001199381|RNF145|153830|ring finger protein 145	0.143824	
chr18	11733086	11733192	reg1005034.p1	12.578	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	-43927	+	NM_022068	-584379	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-1207042	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	18376	+	L10665 TSC_hg19_v1_chr18_+_11752245	19076	+	NM_020412 TSC_hg19_v1_chr18_+_11851412 AK314068 BC065933 BC012733 AF281064 CU680382	118310	+	NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_020412|CHMP1B|57132|charged multivesicular body protein 1B##AK314068|CHMP1B|57132|charged multivesicular body protein 1B##BC065933|CHMP1B|57132|charged multivesicular body protein 1B##BC012733|CHMP1B|57132|charged multivesicular body protein 1B##AF281064|CHMP1B|57132|charged multivesicular body protein 1B	0.903727	CTCF.p2:-2:0.904
chr3	5022097	5022235	reg1007689.p1	12.578	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-812	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	-985	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	-1050	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	141789	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	141925	+	TSC_hg19_v1_chr3_+_5229344 AK298511	207161	+	AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	0.0	
chr7	17809607	17809727	reg1006300.p1	12.577	+	TSC_hg19_v1_chr7_+_17382906 BC021696	-426761	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	-471398	+	AY359065 BC058284 NM_176813	-888063	-	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	170382	-	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	170460	-	BC062797 BC005309 M57423 NM_175886	257798	-	BC021696|AHR|196|aryl hydrocarbon receptor##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13##AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1	0.919491	CTCF.p2:-11:0.919
chr11	26775549	26775662	reg1005847.p1	12.576	+	BC049207 NM_178498	-32046	-	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	-181865	-	NM_031418 AK302659	-421875	+	NM_203371 TSC_hg19_v1_chr11_+_27015658	240037	+	TSC_hg19_v1_chr11_+_27015673 AK310616	240065	+	TSC_hg19_v1_chr11_+_27015837 BC026873	240239	+	BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)##BC026873|FIBIN|387758|fin bud initiation factor homolog (zebrafish)	0.999025	CTCF.p2:6:0.999
chr18	43728835	43728984	reg1007620.p1	12.575	+	AY360137 NM_138443 AK097403 TSC_hg19_v1_chr18_+_43684350 BC014003 AK315605 BC005958 AB463535	-44572	+	NM_001001937	-44711	-	TSC_hg19_v1_chr18_-_43678288 AK310051 NM_004046	-50628	-	TSC_hg19_v1_chr18_+_43754002 NM_001008239 NM_145055 AK292981	25085	+	TSC_hg19_v1_chr18_+_43754007 BC084579	25106	+	TSC_hg19_v1_chr18_+_43754065 AK289738	25173	+	AY360137|HAUS1|115106|HAUS augmin-like complex, subunit 1##NM_138443|HAUS1|115106|HAUS augmin-like complex, subunit 1##AK097403|HAUS1|115106|HAUS augmin-like complex, subunit 1##BC014003|HAUS1|115106|HAUS augmin-like complex, subunit 1##AK315605|HAUS1|115106|HAUS augmin-like complex, subunit 1##BC005958|HAUS1|115106|HAUS augmin-like complex, subunit 1##NM_001001937|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##AK310051|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##NM_004046|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##NM_001008239|C18orf25|147339|chromosome 18 open reading frame 25##NM_145055|C18orf25|147339|chromosome 18 open reading frame 25##AK292981|C18orf25|147339|chromosome 18 open reading frame 25##BC084579|C18orf25|147339|chromosome 18 open reading frame 25##AK289738|C18orf25|147339|chromosome 18 open reading frame 25	0.99984	CTCF.p2:-8:1.000
chr14	63855675	63855802	reg1005719.p1	12.574	+	NM_145171	-70146	-	NM_020663 AF087862 AK027351 AK027278 BC062575 AB209218 AF309563	-184557	+	AK074484 NM_172376	-287155	-	AB451233 AB451358 EU447000 TSC_hg19_v1_chr14_-_64006406	150668	-	BC093766 BC101479 BC143231 BC143234 TSC_hg19_v1_chr14_-_64009581	153835	-	TSC_hg19_v1_chr14_-_64009815 BC048305	154090	-	NM_145171|GPHB5|122876|glycoprotein hormone beta 5##NM_020663|RHOJ|57381|ras homolog gene family, member J##AF087862|RHOJ|57381|ras homolog gene family, member J##AK027351|RHOJ|57381|ras homolog gene family, member J##AK027278|RHOJ|57381|ras homolog gene family, member J##BC062575|RHOJ|57381|ras homolog gene family, member J##AB209218|RHOJ|57381|ras homolog gene family, member J##AF309563|RHOJ|57381|ras homolog gene family, member J##AK074484|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172376|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AB451233|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AB451358|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##EU447000|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC093766|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC101479|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC143231|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC143234|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC048305|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform	0.696079	CTCF.p2:-8:0.696
chr14	78914945	78915073	reg1006682.p1	12.573	+	AB018286 BC152457 NM_004796	-44917	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-648559	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-687500	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	830695	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	1762895	-	AK292210 NM_000793	1782387	-	AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	0.926602	CTCF.p2:-8:0.927
chr18	39694431	39694575	reg1006761.p1	12.572	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-159270	+	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	-159304	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-2314235	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	1001066	-	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	1162926	-	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	2565611	+	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK090603|LOC647946|647946|uncharacterized LOC647946##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1	0.99738	CTCF.p2:-14:0.997
chr20	39591729	39591854	reg1005204.p2	12.572	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-273914	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-2000802	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-2036723	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	65703	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	65873	+	TSC_hg19_v1_chr20_+_39765861 AB210028	174071	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.999392	CTCF.p2:17:0.999
chr6	138323037	138323156	reg1005244.p1	12.572	+	TSC_hg19_v1_chr6_-_138189314 AK124173	-133746	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-134559	+	BC051352 AK096362 NM_175747	-507571	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	105472	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	160040	+	BC069109 NM_021635 AF189269 AF189270	216530	-	AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1	0.999174	CTCF.p2:-13:0.999
chrX	131426941	131427058	reg1005205.p1	12.572	+	BC035382 TSC_hg19_v1_chrX_-_131353476 AK310997	-73498	-	TSC_hg19_v1_chrX_+_131352259 AK095439	-74572	+	TSC_hg19_v1_chrX_-_131352063 BC051467 AY298955 NM_021183	-74939	-	AY372211 AK002178 NM_001170701 NM_001170702 AK300248 NM_001170703	120586	-	AF491305 EU446986 BC074775 BC074776 AB077698 AB077699 AF467070 AJ427918 AJ427919 AY072692 NM_018388 NM_133486	146678	-	BC042090 NM_001170704 TSC_hg19_v1_chrX_-_131624064	197034	-	BC035382|RAP2C|57826|RAP2C, member of RAS oncogene family##AK310997|RAP2C|57826|RAP2C, member of RAS oncogene family##BC051467|RAP2C|57826|RAP2C, member of RAS oncogene family##AY298955|RAP2C|57826|RAP2C, member of RAS oncogene family##NM_021183|RAP2C|57826|RAP2C, member of RAS oncogene family##AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)##EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)	0.999539	CTCF.p2:-3:1.000
chr1	203830534	203830653	reg1006087.p1	12.571	+	NM_001174108	-63943	+	TSC_hg19_v1_chr1_+_203764830 BC014268 BC038513	-65765	+	TSC_hg19_v1_chr1_+_203764804 AK296983	-65789	+	TSC_hg19_v1_chr1_+_203830730 AK307255 D28435 AK309140	134	+	TSC_hg19_v1_chr1_+_203830735 AK312130 BC090951 NM_003094 M37716 X12466 BC002639 S60260	152	+	TSC_hg19_v1_chr1_+_203830776 BC072433 AB464220 M15919	198	+	NM_001174108|ZBED6|100381270|zinc finger, BED-type containing 6##BC014268|ZC3H11A|9877|zinc finger CCCH-type containing 11A##BC038513|ZC3H11A|9877|zinc finger CCCH-type containing 11A##AK296983|ZC3H11A|9877|zinc finger CCCH-type containing 11A##AK307255|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##AK312130|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##BC090951|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##NM_003094|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##M37716|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##X12466|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##BC002639|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##BC072433|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##M15919|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E	0.977885	CTCF.p2:-25:0.978
chr19	8356349	8356490	reg1008056.p1	12.570	+	TSC_hg19_v1_chr19_+_8274253 NM_024552 AK222621 AK225394 AK022151 BC063621	-82171	+	AB384635 AB053450 BC153882 NM_032447	-144044	-	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	-238472	+	TSC_hg19_v1_chr19_-_8373195 CR457174 EU831651 BC036814 BC007083 AY358420 AL365455 BC000668 AK222623 AK315656 AL136652 AK058014 AF161254 NM_001165895 NM_016579	16790	-	TSC_hg19_v1_chr19_-_8386260 AF050637 CR456915 CR542266 BC107892 AF054178	29838	-	TSC_hg19_v1_chr19_-_8386300 BC003102 NM_005001	29867	-	NM_024552|CERS4|79603|ceramide synthase 4##AK222621|CERS4|79603|ceramide synthase 4##AK225394|CERS4|79603|ceramide synthase 4##AK022151|CERS4|79603|ceramide synthase 4##BC063621|CERS4|79603|ceramide synthase 4##AB053450|FBN3|84467|fibrillin 3##BC153882|FBN3|84467|fibrillin 3##NM_032447|FBN3|84467|fibrillin 3##BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25##CR457174|CD320|51293|CD320 molecule##EU831651|CD320|51293|CD320 molecule##BC036814|CD320|51293|CD320 molecule##BC007083|CD320|51293|CD320 molecule##AY358420|CD320|51293|CD320 molecule##AL365455|CD320|51293|CD320 molecule##BC000668|CD320|51293|CD320 molecule##AK222623|CD320|51293|CD320 molecule##AK315656|CD320|51293|CD320 molecule##AL136652|CD320|51293|CD320 molecule##AK058014|CD320|51293|CD320 molecule##AF161254|CD320|51293|CD320 molecule##NM_001165895|CD320|51293|CD320 molecule##NM_016579|CD320|51293|CD320 molecule##AF050637|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR456915|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR542266|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##BC107892|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##AF054178|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##BC003102|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##NM_005001|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa	0.0	
chr20	42166850	42166991	reg1005774.p1	12.570	+	TSC_hg19_v1_chr20_+_42143151 AK310345 NM_015478 AK308334 BC039820 BC034398 HQ257883 EU446490	-23802	+	TSC_hg19_v1_chr20_+_42136336 NM_032107 AK299199	-30576	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	-80317	+	NM_170693 TSC_hg19_v1_chr20_+_42187666 AK308502	20730	+	BC006523 TSC_hg19_v1_chr20_+_42187715 BC014037 AF169034	20800	+	NM_001199264 BC065511 AK289596	26894	+	AK310345|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##NM_015478|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK308334|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##BC039820|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##BC034398|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##EU446490|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##NM_032107|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK299199|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6##NM_170693|SGK2|10110|serum/glucocorticoid regulated kinase 2##AK308502|SGK2|10110|serum/glucocorticoid regulated kinase 2##BC006523|SGK2|10110|serum/glucocorticoid regulated kinase 2##BC014037|SGK2|10110|serum/glucocorticoid regulated kinase 2##AF169034|SGK2|10110|serum/glucocorticoid regulated kinase 2##NM_001199264|SGK2|10110|serum/glucocorticoid regulated kinase 2##BC065511|SGK2|10110|serum/glucocorticoid regulated kinase 2##AK289596|SGK2|10110|serum/glucocorticoid regulated kinase 2	0.998623	CTCF.p2:-11:0.999
chr6	113101830	113101954	reg1004989.p1	12.570	+	AK122906 NM_001013734	-433361	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-525997	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-526087	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	1076842	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	1190380	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	1190444	-	AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2	0.857333	CTCF.p2:-6:0.836
chr8	42529326	42529434	reg1004057.p1	12.570	+	TSC_hg19_v1_chr8_-_42397069 BC028600 NM_006749	-132319	-	TSC_hg19_v1_chr8_+_42396791 NM_138436 BC013035 NM_001135674 NM_001135675	-132553	+	TSC_hg19_v1_chr8_-_42396648 AK314774	-132729	-	BC069681 BC069703 BC069788 NM_000749 Y08417 U62438 CU686976 CU686982	23245	+	NM_001199279 NM_004198	94548	-	AL832077 BC021721 AK223231 TSC_hg19_v1_chr8_-_42698469 AK001339 NM_018105 NM_199003	169081	-	BC028600|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##NM_006749|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##NM_138436|C8orf40|114926|chromosome 8 open reading frame 40##BC013035|C8orf40|114926|chromosome 8 open reading frame 40##NM_001135674|C8orf40|114926|chromosome 8 open reading frame 40##NM_001135675|C8orf40|114926|chromosome 8 open reading frame 40##AK314774|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##BC069681|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##BC069703|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##BC069788|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##NM_000749|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##Y08417|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##U62438|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##NM_001199279|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6##NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6##AL832077|THAP1|55145|THAP domain containing, apoptosis associated protein 1##BC021721|THAP1|55145|THAP domain containing, apoptosis associated protein 1##AK223231|THAP1|55145|THAP domain containing, apoptosis associated protein 1##AK001339|THAP1|55145|THAP domain containing, apoptosis associated protein 1##NM_018105|THAP1|55145|THAP domain containing, apoptosis associated protein 1##NM_199003|THAP1|55145|THAP domain containing, apoptosis associated protein 1	0.434145	CTCF.p2:4:0.434
chr10	103929297	103929414	reg1006550.p1	12.569	+	NM_004741 TSC_hg19_v1_chr10_+_103912145 Z34289 AK225101 AK314363 AK056755 BC001883 BC006769 DQ891862 DQ895051 AY820769 D21262	-17304	+	AF325193 NM_015062 TSC_hg19_v1_chr10_+_103892796 AK299885 BC063806 AB011167 BC063829 AK095248 AB384505	-36550	+	TSC_hg19_v1_chr10_-_103879963 NM_001113407	-49212	-	BC034344 NM_152310	56787	+	BC011642 NM_005029	71874	-	NM_001199378 NM_001199379 NM_004193 BC057804 BC068543 TSC_hg19_v1_chr10_+_104005288 BC094763 AK025330 BC032543	75924	+	NM_004741|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##Z34289|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK225101|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK314363|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK056755|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC001883|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC006769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##DQ891862|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##DQ895051|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AY820769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##D21262|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AF325193|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##NM_015062|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AK299885|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC063806|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AB011167|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC063829|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AK095248|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##NM_001113407|LDB1|8861|LIM domain binding 1##BC034344|ELOVL3|83401|ELOVL fatty acid elongase 3##NM_152310|ELOVL3|83401|ELOVL fatty acid elongase 3##BC011642|PITX3|5309|paired-like homeodomain 3##NM_005029|PITX3|5309|paired-like homeodomain 3##NM_001199378|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199379|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	0.990998	CTCF.p2:1:0.991
chr13	27272943	27273056	reg1005964.p2	12.569	+	TSC_hg19_v1_chr13_+_27131892 AF454702	-141097	+	TSC_hg19_v1_chr13_+_27131854 AK289845 BC050283 NM_006646	-141165	+	BC069634 BC104492 BC105950 BC107601 NM_001260 X85753 AY702976 CU686950	-444233	+	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	61854	-	DQ894074 AF022789 TSC_hg19_v1_chr13_-_27745948 AK289685	472862	-	TSC_hg19_v1_chr13_-_27746003 BC026072 NM_182488	473087	-	AF454702|WASF3|10810|WAS protein family, member 3##AK289845|WASF3|10810|WAS protein family, member 3##BC050283|WASF3|10810|WAS protein family, member 3##NM_006646|WASF3|10810|WAS protein family, member 3##BC069634|CDK8|1024|cyclin-dependent kinase 8##BC104492|CDK8|1024|cyclin-dependent kinase 8##BC105950|CDK8|1024|cyclin-dependent kinase 8##BC107601|CDK8|1024|cyclin-dependent kinase 8##NM_001260|CDK8|1024|cyclin-dependent kinase 8##X85753|CDK8|1024|cyclin-dependent kinase 8##AY702976|CDK8|1024|cyclin-dependent kinase 8##AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12##DQ894074|USP12|219333|ubiquitin specific peptidase 12##AF022789|USP12|219333|ubiquitin specific peptidase 12##AK289685|USP12|219333|ubiquitin specific peptidase 12##BC026072|USP12|219333|ubiquitin specific peptidase 12##NM_182488|USP12|219333|ubiquitin specific peptidase 12	0.999905	CTCF.p2:11:1.000
chr12	95928296	95928397	reg1004907.p2	12.568	+	NM_006838 AK300836 TSC_hg19_v1_chr12_+_95867927 AK315559 U13261 AK055692 U29607 BC013782 AK091730 AX747149 AB463882 DQ891013 DQ894193	-60449	+	TSC_hg19_v1_chr12_+_95676175 AL133113	-252128	+	TSC_hg19_v1_chr12_+_95611582 NM_017599 AK001338 AK225303 AK309943 AK225356 BC014443 AK307864 AL137497 BC064939 BC028597	-316652	+	AK027434 TSC_hg19_v1_chr12_-_95942575 BC030704 NM_001042403	14268	-	AL136825 NM_032147	16898	-	TSC_hg19_v1_chr12_-_96184346 AF297711 AK226070 AK315796	256023	-	NM_006838|METAP2|10988|methionyl aminopeptidase 2##AK300836|METAP2|10988|methionyl aminopeptidase 2##AK315559|METAP2|10988|methionyl aminopeptidase 2##U13261|METAP2|10988|methionyl aminopeptidase 2##AK055692|METAP2|10988|methionyl aminopeptidase 2##BC013782|METAP2|10988|methionyl aminopeptidase 2##AK091730|METAP2|10988|methionyl aminopeptidase 2##DQ891013|METAP2|10988|methionyl aminopeptidase 2##DQ894193|METAP2|10988|methionyl aminopeptidase 2##AL133113|VEZT|55591|vezatin, adherens junctions transmembrane protein##NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein##AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK027434|USP44|84101|ubiquitin specific peptidase 44##BC030704|USP44|84101|ubiquitin specific peptidase 44##NM_001042403|USP44|84101|ubiquitin specific peptidase 44##AL136825|USP44|84101|ubiquitin specific peptidase 44##NM_032147|USP44|84101|ubiquitin specific peptidase 44##AF297711|NTN4|59277|netrin 4##AK226070|NTN4|59277|netrin 4##AK315796|NTN4|59277|netrin 4	0.993576	CTCF.p2:6:0.994
chr6	797647	797759	reg1005505.p2	12.568	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-104613	-	AF508547 BC101697 BC101699 NM_148959	-140750	-	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-405939	+	BC053850 NM_033260	514971	+	NM_001452 U13220 AB463646	592422	+	BC134421 NM_001453	812977	+	AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1	0.969778	CTCF.p2:-11:0.970
chr10	64314498	64314647	reg1007788.p1	12.566	+	AJ505150 NM_199452	-34366	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-180529	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-286033	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	249970	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	250085	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	261525	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	1.005658	CTCF.p2:3:0.981
chr1	45060921	45061039	reg1006653.p1	12.565	+	AK056424 TSC_hg19_v1_chr1_+_44870926 BC034221 NM_018150	-190038	+	TSC_hg19_v1_chr1_-_44820942 AK026596	-240019	-	TSC_hg19_v1_chr1_-_44820938 AK290567 NM_024066	-240044	-	TSC_hg19_v1_chr1_+_45097700 AK296038 AK225180	36782	+	CR457348 AK026006 AK225405 TSC_hg19_v1_chr1_-_45140099 BC064520 NM_024587 AL832539	79107	-	AK296548 TSC_hg19_v1_chr1_-_45140143 BC007521	79168	-	AK056424|RNF220|55182|ring finger protein 220##BC034221|RNF220|55182|ring finger protein 220##NM_018150|RNF220|55182|ring finger protein 220##AK026596|ERI3|79033|ERI1 exoribonuclease family member 3##AK290567|ERI3|79033|ERI1 exoribonuclease family member 3##NM_024066|ERI3|79033|ERI1 exoribonuclease family member 3##AK296038|RNF220|55182|ring finger protein 220##AK225180|RNF220|55182|ring finger protein 220##CR457348|TMEM53|79639|transmembrane protein 53##AK026006|TMEM53|79639|transmembrane protein 53##AK225405|TMEM53|79639|transmembrane protein 53##BC064520|TMEM53|79639|transmembrane protein 53##NM_024587|TMEM53|79639|transmembrane protein 53##AL832539|TMEM53|79639|transmembrane protein 53##AK296548|TMEM53|79639|transmembrane protein 53##BC007521|TMEM53|79639|transmembrane protein 53	1.249741	CTCF.p2:10:0.987	CTCF.p2:39:0.263
chr15	60619143	60619259	reg1006108.p1	12.565	+	TSC_hg19_v1_chr15_+_60296509 AK314075	-322652	+	EF565104 TSC_hg19_v1_chr15_+_60296453	-322752	+	AK290944 NM_012182 TSC_hg19_v1_chr15_+_60296425	-322773	+	AB587463 BC068065 BC009564 BC021114 BC052567 BC001388 BC013843 D00017 TSC_hg19_v1_chr15_-_60690186 AK222542 BX640598 AK297923 BC015834 BC023990 BC066955 BC093056 D28364 NM_001002857 NM_001002858 NM_001136015 NM_004039 AK309956 BC016774	70960	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	152073	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	265478	-	AK314075|FOXB1|27023|forkhead box B1##AK290944|FOXB1|27023|forkhead box B1##NM_012182|FOXB1|27023|forkhead box B1##BC068065|ANXA2|302|annexin A2##BC009564|ANXA2|302|annexin A2##BC021114|ANXA2|302|annexin A2##BC052567|ANXA2|302|annexin A2##BC001388|ANXA2|302|annexin A2##BC013843|ANXA2|302|annexin A2##D00017|ANXA2|302|annexin A2##AK222542|ANXA2|302|annexin A2##BX640598|ANXA2|302|annexin A2##AK297923|ANXA2|302|annexin A2##BC015834|ANXA2|302|annexin A2##BC023990|ANXA2|302|annexin A2##BC066955|ANXA2|302|annexin A2##BC093056|ANXA2|302|annexin A2##D28364|ANXA2|302|annexin A2##NM_001002857|ANXA2|302|annexin A2##NM_001002858|ANXA2|302|annexin A2##NM_001136015|ANXA2|302|annexin A2##NM_004039|ANXA2|302|annexin A2##BC016774|ANXA2|302|annexin A2##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A	0.775447	CTCF.p2:14:0.775
chr2	217547307	217547414	reg1005465.p1	12.565	+	L27560 AF147308 TSC_hg19_v1_chr2_-_217540846	-6576	-	TSC_hg19_v1_chr2_+_217498216 DQ893450 EU176752	-49062	+	TSC_hg19_v1_chr2_+_217498142 NM_000597 X16302 BC071967 AB209509 BC004312 BC009902 BC012769 M35410	-49224	+	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	12206	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	12900	-	BC029516 NM_003284	177421	-	L27560|IGFBP5|3488|insulin-like growth factor binding protein 5##AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5##DQ893450|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##EU176752|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)	0.986266	CTCF.p2:12:0.986
chr7	47859041	47859168	reg1007419.p1	12.565	+	AK024728 NM_025031 BC113679 BC113681 AK092057 AX747337	-24166	+	AK126096 NM_001123065	-164263	+	TSC_hg19_v1_chr7_-_47622186 AB208995	-236918	-	AB061683 NM_138295	128949	-	BT019481 BT019482 CR536552 Y16893 AB463759 BC007013 TSC_hg19_v1_chr7_-_48019149 AK294117 AK290459 AF076844 AF110393	160048	-	TSC_hg19_v1_chr7_-_48019247 NM_004507	160125	-	AK024728|C7orf69|80099|chromosome 7 open reading frame 69##NM_025031|C7orf69|80099|chromosome 7 open reading frame 69##BC113679|C7orf69|80099|chromosome 7 open reading frame 69##BC113681|C7orf69|80099|chromosome 7 open reading frame 69##AK092057|PKD1L1|168507|polycystic kidney disease 1 like 1##AK126096|C7orf65|401335|chromosome 7 open reading frame 65##NM_001123065|C7orf65|401335|chromosome 7 open reading frame 65##AB208995|TNS3|64759|tensin 3##AB061683|PKD1L1|168507|polycystic kidney disease 1 like 1##NM_138295|PKD1L1|168507|polycystic kidney disease 1 like 1##BT019481|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BT019482|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##CR536552|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##Y16893|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BC007013|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK294117|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK290459|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF076844|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF110393|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##NM_004507|HUS1|3364|HUS1 checkpoint homolog (S. pombe)	0.974122	CTCF.p2:7:0.974
chrX	10690941	10691059	reg1005056.p1	12.565	+	AF041206 NM_001098624 AK299061	-45244	-	AF230976 AF230977 Y13667 AK226104 AK315095 BC053626 AK291215 TSC_hg19_v1_chrX_-_10588583 AY112901 AK297205 NM_000381 NM_033289	-102435	-	AF035360 NM_001193277 AY112903	-146096	-	NM_033290	160808	-	NM_001122608 NM_001171991 NM_005333 AK097815 TSC_hg19_v1_chrX_+_11129447 CR749578	438430	+	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	438469	+	AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF230976|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF230977|MID1|4281|midline 1 (Opitz/BBB syndrome)##Y13667|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK226104|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK315095|MID1|4281|midline 1 (Opitz/BBB syndrome)##BC053626|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK291215|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112901|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK297205|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_000381|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_033289|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112903|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_033290|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001122608|HCCS|3052|holocytochrome c synthase##NM_001171991|HCCS|3052|holocytochrome c synthase##NM_005333|HCCS|3052|holocytochrome c synthase##AK097815|HCCS|3052|holocytochrome c synthase##CR749578|HCCS|3052|holocytochrome c synthase##BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase	0.999304	CTCF.p2:13:0.999
chr17	77682539	77682667	reg1004348.p2	12.564	+	NM_001082575	-204041	-	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-611573	+	AF329840 NM_198593 BC021553	-652081	+	AY230663 BC041453 NM_178543 AY358622	22286	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	69378	+	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	88304	-	NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8	0.99674	CTCF.p2:10:0.997
chr20	43724567	43724684	reg1007513.p1	12.564	+	AK315238 U60207 TSC_hg19_v1_chr20_+_43595176 BC058916 BC039023 U18297	-129434	+	NM_006282 TSC_hg19_v1_chr20_+_43595152 AB209315 BC029511 AK309169 AK225326 BC005231 BC015332 BC038850 CR933633 BC093768	-129479	+	AB590243 BT020008 BT020009 CR456765 CU677113 DQ891151 EU176561 TSC_hg19_v1_chr20_-_43589038 AK129538 U58970 BC014907 AK222952 BC001763 BC007423 AK000594 BC006573 AB085681 AK302128 AK307655 NM_006809	-135571	-	BC132957 BC132959 BC144234 TSC_hg19_v1_chr20_-_43729732 AK289735 NM_002251	5064	-	CU691668 AY038181 BC039173 AY358822 NM_145652	19142	-	AB464352 AY358678 AY037803 NM_080869	28471	-	AK315238|STK4|6789|serine/threonine kinase 4##U60207|STK4|6789|serine/threonine kinase 4##BC058916|STK4|6789|serine/threonine kinase 4##BC039023|STK4|6789|serine/threonine kinase 4##U18297|STK4|6789|serine/threonine kinase 4##NM_006282|STK4|6789|serine/threonine kinase 4##AB209315|STK4|6789|serine/threonine kinase 4##BC029511|STK4|6789|serine/threonine kinase 4##AK309169|STK4|6789|serine/threonine kinase 4##AK225326|STK4|6789|serine/threonine kinase 4##BC005231|STK4|6789|serine/threonine kinase 4##BC015332|STK4|6789|serine/threonine kinase 4##BC038850|STK4|6789|serine/threonine kinase 4##CR933633|STK4|6789|serine/threonine kinase 4##BC093768|STK4|6789|serine/threonine kinase 4##BT020008|TOMM34|10953|translocase of outer mitochondrial membrane 34##BT020009|TOMM34|10953|translocase of outer mitochondrial membrane 34##CR456765|TOMM34|10953|translocase of outer mitochondrial membrane 34##DQ891151|TOMM34|10953|translocase of outer mitochondrial membrane 34##EU176561|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK129538|TOMM34|10953|translocase of outer mitochondrial membrane 34##U58970|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC014907|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK222952|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC001763|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC007423|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK000594|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC006573|TOMM34|10953|translocase of outer mitochondrial membrane 34##AB085681|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK302128|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK307655|TOMM34|10953|translocase of outer mitochondrial membrane 34##NM_006809|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC132957|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC132959|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC144234|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##AK289735|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##NM_002251|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##AY038181|WFDC5|149708|WAP four-disulfide core domain 5##BC039173|WFDC5|149708|WAP four-disulfide core domain 5##AY358822|WFDC5|149708|WAP four-disulfide core domain 5##NM_145652|WFDC5|149708|WAP four-disulfide core domain 5##AY358678|WFDC12|128488|WAP four-disulfide core domain 12##AY037803|WFDC12|128488|WAP four-disulfide core domain 12##NM_080869|WFDC12|128488|WAP four-disulfide core domain 12	0.998965	CTCF.p2:-4:0.999
chr5	159935902	159936042	reg1007230.p1	12.563	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-87069	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-87118	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-89867	-	AK025130 TSC_hg19_v1_chr5_-_160112393	176367	-	AB018258 AK295081 AK090832 AX746642 NM_025153	343159	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	1039154	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.999296	CTCF.p2:-8:0.999
chr4	81991035	81991153	reg1007160.p1	12.562	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	-38952	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-734197	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	-803235	+	AB528214 D70899 NM_006259 X94612	135113	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	401889	-	TSC_hg19_v1_chr4_-_82393062 AK291459 BC036784 AK303625 AK056257 NM_152545	401966	-	M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B##AK291459|RASGEF1B|153020|RasGEF domain family, member 1B##BC036784|RASGEF1B|153020|RasGEF domain family, member 1B##AK303625|RASGEF1B|153020|RasGEF domain family, member 1B##AK056257|RASGEF1B|153020|RasGEF domain family, member 1B##NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B	0.966833	CTCF.p2:0:0.967
chr10	90789707	90789854	reg1004993.p1	12.561	+	AK311424 TSC_hg19_v1_chr10_+_90751184 AK311164 AK311499	-38659	+	TSC_hg19_v1_chr10_-_90751090 AY692464 NM_001141945	-38730	-	TSC_hg19_v1_chr10_+_90750599 AK290978 X63717 M67454 X83490 X83491 X83492 X83493 DQ894675 AY495076 CR450307 EU481974 FJ373045 FJ373046 FM246457 FM246458 FM246459 X89101 Z47993 Z47994 Z47995 Z66556 Z70519 Z70520	-39272	+	CU687230 DQ892026 DQ895218 BC072430 AF059214 BC017843 NM_003956 AK314865	177280	-	U08464 Z31690 TSC_hg19_v1_chr10_-_91011533 AK222760 AK290241 AK297079 AK314665 M74775	221750	-	AK130882 TSC_hg19_v1_chr10_-_91011565	221787	-	AK311424|FAS|355|Fas (TNF receptor superfamily, member 6)##AK311164|FAS|355|Fas (TNF receptor superfamily, member 6)##AK311499|FAS|355|Fas (TNF receptor superfamily, member 6)##AY692464|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001141945|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK290978|FAS|355|Fas (TNF receptor superfamily, member 6)##X63717|FAS|355|Fas (TNF receptor superfamily, member 6)##M67454|FAS|355|Fas (TNF receptor superfamily, member 6)##X83490|FAS|355|Fas (TNF receptor superfamily, member 6)##X83491|FAS|355|Fas (TNF receptor superfamily, member 6)##X83492|FAS|355|Fas (TNF receptor superfamily, member 6)##X83493|FAS|355|Fas (TNF receptor superfamily, member 6)##DQ894675|FAS|355|Fas (TNF receptor superfamily, member 6)##AY495076|FAS|355|Fas (TNF receptor superfamily, member 6)##CR450307|FAS|355|Fas (TNF receptor superfamily, member 6)##EU481974|FAS|355|Fas (TNF receptor superfamily, member 6)##FJ373045|FAS|355|Fas (TNF receptor superfamily, member 6)##FJ373046|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246457|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246458|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246459|FAS|355|Fas (TNF receptor superfamily, member 6)##X89101|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47993|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47994|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47995|FAS|355|Fas (TNF receptor superfamily, member 6)##Z66556|FAS|355|Fas (TNF receptor superfamily, member 6)##Z70519|FAS|355|Fas (TNF receptor superfamily, member 6)##Z70520|FAS|355|Fas (TNF receptor superfamily, member 6)##DQ892026|CH25H|9023|cholesterol 25-hydroxylase##DQ895218|CH25H|9023|cholesterol 25-hydroxylase##BC072430|CH25H|9023|cholesterol 25-hydroxylase##AF059214|CH25H|9023|cholesterol 25-hydroxylase##BC017843|CH25H|9023|cholesterol 25-hydroxylase##NM_003956|CH25H|9023|cholesterol 25-hydroxylase##AK314865|CH25H|9023|cholesterol 25-hydroxylase##U08464|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##Z31690|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK222760|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK290241|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK297079|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK314665|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##M74775|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK130882|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	0.999699	CTCF.p2:2:1.000
chr18	13159619	13159740	reg1006617.p1	12.561	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-168334	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-211615	+	TSC_hg19_v1_chr18_+_12948009 AK314403	-211673	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	59106	+	NM_001003674 NM_001003675	451985	+	AF009426 AF009427 NM_004338 NM_181483	461187	+	AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##AK314403|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1	0.181148	
chr14	106146603	106146712	reg1004345.p1	12.560	+	TSC_hg19_v1_chr14_-_106111114 AJ294731	-35541	-	BC040042 TSC_hg19_v1_chr14_-_106110945	-35734	-	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	-54321	-	TSC_hg19_v1_chr14_-_106174914 BC113815 AJ294729	28296	-	TSC_hg19_v1_chr14_-_106208542 AF487336	61892	-	AF150959 TSC_hg19_v1_chr14_-_106208714 S76144	62053	-	AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AJ294729|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.836909	CTCF.p2:-30:0.837
chr2	134318758	134318865	reg1004685.p2	12.560	+	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-139457	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-779117	-	NM_001077427 AK309668	-889701	-	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	7227	-	NM_002410 D17716 AF113921	693074	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	1157745	-	AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1##AK309668|LYPD1|116372|LY6/PLAUR domain containing 1##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163	0.44948	CTCF.p2:9:0.449
chr4	113156293	113156422	reg1005327.p1	12.560	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	-3273	+	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	-89743	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1593079	-	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	50644	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	62170	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	280975	-	NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2	0.992866	CTCF.p2:7:0.993
chr19	1672409	1672533	reg1001769.p3	12.559	+	M31222 NM_003200 TSC_hg19_v1_chr19_-_1652346	-20132	-	AB385055 BC110579 BC110580 M31523 NM_001136139	-22206	-	TSC_hg19_v1_chr19_-_1605464 NM_006830	-66998	-	NM_001080488 TSC_hg19_v1_chr19_+_1753823	81281	+	TSC_hg19_v1_chr19_+_1776120 AK074606	103716	+	AY302538 NM_001178002 TSC_hg19_v1_chr19_-_1812276 BC035162 NM_138813 AK125225 AK125969	139766	-	M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##BC110580|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##M31523|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_001136139|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_006830|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##NM_001080488|ONECUT3|390874|one cut homeobox 3##AY302538|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001178002|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##BC035162|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_138813|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125225|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125969|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3	0.70587	CTCF.p2:14:0.706
chr3	84691	84844	reg1006582.p1	12.559	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr3_+_238278 NM_001253387 NM_006614	153514	+	TSC_hg19_v1_chr3_+_238445 AB209329	153682	+	TSC_hg19_v1_chr3_+_238541 AF002246	153825	+	NM_001253387|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##NM_006614|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AB209329|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AF002246|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)	0.989121	CTCF.p2:-18:0.989
chr5	156559131	156559262	reg1005567.p1	12.559	+	TSC_hg19_v1_chr5_-_156536188 NM_032782	-22980	-	AK027334 TSC_hg19_v1_chr5_-_156536052 AF450242 AF450243 AK314406 BC020843 AF251707 BC063431	-23093	-	AY069944 CU687712 TSC_hg19_v1_chr5_-_156536016	-23185	-	NM_001100816 TSC_hg19_v1_chr5_-_156569881 AK123613 AF031383 BC005250 BC006968 AK308393 NM_004270	10656	-	AY973323 CU692472 AF465821 BC025397 AK057543 BC022035 BC025409 BC025998 NM_130899	34032	-	BC094701 AB209622 D13720 NM_005546 BC109077 BC109078 AK312846 AK303609 AB590549	48721	+	NM_032782|HAVCR2|84868|hepatitis A virus cellular receptor 2##AK027334|HAVCR2|84868|hepatitis A virus cellular receptor 2##AF450242|HAVCR2|84868|hepatitis A virus cellular receptor 2##AF450243|HAVCR2|84868|hepatitis A virus cellular receptor 2##AK314406|HAVCR2|84868|hepatitis A virus cellular receptor 2##BC020843|HAVCR2|84868|hepatitis A virus cellular receptor 2##AF251707|HAVCR2|84868|hepatitis A virus cellular receptor 2##BC063431|HAVCR2|84868|hepatitis A virus cellular receptor 2##AY069944|HAVCR2|84868|hepatitis A virus cellular receptor 2##NM_001100816|MED7|9443|mediator complex subunit 7##AF031383|MED7|9443|mediator complex subunit 7##BC005250|MED7|9443|mediator complex subunit 7##BC006968|MED7|9443|mediator complex subunit 7##AK308393|MED7|9443|mediator complex subunit 7##NM_004270|MED7|9443|mediator complex subunit 7##AY973323|FAM71B|153745|family with sequence similarity 71, member B##AF465821|FAM71B|153745|family with sequence similarity 71, member B##BC025397|FAM71B|153745|family with sequence similarity 71, member B##AK057543|FAM71B|153745|family with sequence similarity 71, member B##BC022035|FAM71B|153745|family with sequence similarity 71, member B##BC025409|FAM71B|153745|family with sequence similarity 71, member B##BC025998|FAM71B|153745|family with sequence similarity 71, member B##NM_130899|FAM71B|153745|family with sequence similarity 71, member B##AB209622|ITK|3702|IL2-inducible T-cell kinase##D13720|ITK|3702|IL2-inducible T-cell kinase##NM_005546|ITK|3702|IL2-inducible T-cell kinase##BC109077|ITK|3702|IL2-inducible T-cell kinase##BC109078|ITK|3702|IL2-inducible T-cell kinase##AK312846|ITK|3702|IL2-inducible T-cell kinase##AK303609|ITK|3702|IL2-inducible T-cell kinase	0.478819	CTCF.p2:14:0.479
chr6	118886613	118886736	reg1006210.p1	12.558	+	NM_002667 M63603 AK311799 BC005269	-17209	+	BC028615 NM_001029858 BC114925	-657984	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-890008	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	86362	-	BC110835 BC064835 NM_001178035	144559	-	NM_014034 AK025738 AL050261 BC010878 AB028628 AF279306 CU679835 CR457347	328734	+	NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like##NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	0.533607	CTCF.p2:-14:0.534
chr11	60033219	60033370	reg1007158.p1	12.556	+	AK291870 NM_001247999 NM_152852	-81156	-	AK301387 TSC_hg19_v1_chr11_-_59950526 AB013104 AF350502 AF350503 AF142409 BC022854 BC108728 AK026454 AF212240 AF237908 AF253977 AF261136 AF354930 AK300725 NM_022349 NM_152851	-82644	-	AK304487 AK310142 NM_000139 D10583 BC074800 BC074843 AB590499 JF411082	-177107	+	NM_001243266 NM_024021 NM_148975 AK292089 AK075081 TSC_hg19_v1_chr11_+_60048138 BC020648 CU676600 DQ891395 DQ894573 AB022821 AK314033 AB013102	14799	+	BC101783 AF333758 AF354931 BC069322 NM_139249 GQ129453 GQ129454 AF354933 BC034588 AF354932	69088	+	AK075106 NM_021201 NM_206938 NM_206939 NM_206940 AK297027 TSC_hg19_v1_chr11_+_60146004 BC043485 AF309653 AK309884	112693	+	AK291870|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001247999|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK301387|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AB013104|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF350502|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF350503|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF142409|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC022854|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC108728|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK026454|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF212240|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF237908|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF253977|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF261136|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF354930|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK300725|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_022349|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152851|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK304487|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##AK310142|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##NM_000139|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##D10583|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##BC074800|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##BC074843|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##JF411082|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##NM_001243266|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_024021|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_148975|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK292089|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK075081|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC020648|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ891395|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ894573|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB022821|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK314033|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB013102|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC101783|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF333758|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354931|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC069322|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_139249|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129453|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129454|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354933|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC034588|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354932|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AK075106|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_021201|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206938|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206939|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206940|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK297027|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF309653|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK309884|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7	0.961668	CTCF.p2:-15:0.962
chr14	105947310	105947434	reg1006955.p1	12.555	+	TSC_hg19_v1_chr14_+_105941158 BC034151 NM_001312 AK315757 U36190 BC034386 BC128101 D42123 BC000434 BC001931 DQ891382 DQ894559 AB528485 AK223251 BT019911	-6242	+	TSC_hg19_v1_chr14_+_105886291 U35113 AF508978 AB590461	-61058	+	TSC_hg19_v1_chr14_+_105886196 BC142941 NM_001203258 NM_004689	-61190	+	NM_001311	5884	+	TSC_hg19_v1_chr14_+_105953533 AK098290 U09770 BC002738 DQ892958 DQ896205 BT007181 U58630	6191	+	BX161477 NM_001198983	8819	+	BC034151|CRIP2|1397|cysteine-rich protein 2##NM_001312|CRIP2|1397|cysteine-rich protein 2##AK315757|CRIP2|1397|cysteine-rich protein 2##U36190|CRIP2|1397|cysteine-rich protein 2##BC034386|CRIP2|1397|cysteine-rich protein 2##BC128101|CRIP2|1397|cysteine-rich protein 2##D42123|CRIP2|1397|cysteine-rich protein 2##BC000434|CRIP2|1397|cysteine-rich protein 2##BC001931|CRIP2|1397|cysteine-rich protein 2##DQ891382|CRIP2|1397|cysteine-rich protein 2##DQ894559|CRIP2|1397|cysteine-rich protein 2##AK223251|CRIP2|1397|cysteine-rich protein 2##BT019911|CRIP2|1397|cysteine-rich protein 2##U35113|MTA1|9112|metastasis associated 1##AF508978|MTA1|9112|metastasis associated 1##BC142941|MTA1|9112|metastasis associated 1##NM_001203258|MTA1|9112|metastasis associated 1##NM_004689|MTA1|9112|metastasis associated 1##NM_001311|CRIP1|1396|cysteine-rich protein 1 (intestinal)##AK098290|CRIP1|1396|cysteine-rich protein 1 (intestinal)##U09770|CRIP1|1396|cysteine-rich protein 1 (intestinal)##BC002738|CRIP1|1396|cysteine-rich protein 1 (intestinal)##DQ892958|CRIP1|1396|cysteine-rich protein 1 (intestinal)##DQ896205|CRIP1|1396|cysteine-rich protein 1 (intestinal)##BT007181|CRIP1|1396|cysteine-rich protein 1 (intestinal)##U58630|CRIP1|1396|cysteine-rich protein 1 (intestinal)##BX161477|C14orf80|283643|chromosome 14 open reading frame 80##NM_001198983|C14orf80|283643|chromosome 14 open reading frame 80	1.005657	CTCF.p2:0:0.995
chr11	36586043	36586167	reg1002355.p1	12.554	+	TSC_hg19_v1_chr11_-_36531820 U78798 BC031052 AK292978 NM_004620 NM_145803	-54291	-	NM_001160169	-163559	+	NM_001160168 NM_024841 BX640959 AK024275	-188545	+	NM_000448 M29474	3463	+	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	29999	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	33697	-	U78798|TRAF6|7189|TNF receptor-associated factor 6##BC031052|TRAF6|7189|TNF receptor-associated factor 6##AK292978|TRAF6|7189|TNF receptor-associated factor 6##NM_004620|TRAF6|7189|TNF receptor-associated factor 6##NM_145803|TRAF6|7189|TNF receptor-associated factor 6##NM_001160169|PRR5L|79899|proline rich 5 like##NM_001160168|PRR5L|79899|proline rich 5 like##NM_024841|PRR5L|79899|proline rich 5 like##BX640959|PRR5L|79899|proline rich 5 like##AK024275|PRR5L|79899|proline rich 5 like##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2	0.546973	CTCF.p2:-1:0.547
chr1	157339845	157339952	reg1006267.p1	12.554	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-231615	-	TSC_hg19_v1_chr1_-_157108158 L16464	-231748	-	AK131392 NM_001004341	-270299	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	182332	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	227903	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	330629	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.877079	CTCF.p2:-6:0.877
chr11	63916237	63916333	reg1005104.p1	12.554	+	AY358308 BC018370 NM_013280	-44985	+	TSC_hg19_v1_chr11_+_63754327 AK307413	-161972	+	BC010368 BC107701 TSC_hg19_v1_chr11_+_63753917 AK303228 AF161381 AK225133 AL096714 AK091830 BC007519 AY177200 CU675687 CU679683	-162365	+	AF086206 BC003188 TSC_hg19_v1_chr11_-_63933439	17036	-	TSC_hg19_v1_chr11_-_63933585 AF202922 BC000270 BC007297 BC008316 NM_014067	17270	-	NM_006819 TSC_hg19_v1_chr11_+_63953613	37320	+	AY358308|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##BC018370|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##NM_013280|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AF086206|MACROD1|28992|MACRO domain containing 1##BC003188|MACROD1|28992|MACRO domain containing 1##AF202922|MACROD1|28992|MACRO domain containing 1##BC000270|MACROD1|28992|MACRO domain containing 1##BC007297|MACROD1|28992|MACRO domain containing 1##BC008316|MACROD1|28992|MACRO domain containing 1##NM_014067|MACROD1|28992|MACRO domain containing 1##NM_006819|STIP1|10963|stress-induced-phosphoprotein 1	0.999812	CTCF.p2:11:1.000
chr12	21322956	21323059	reg1005787.p2	12.554	+	BC020696 NM_006446 BC070172 AB026257 BC114376 BC054878 BC105596 AK312970	-38871	+	AF401642 NM_001009562	-154378	+	BC058006 BC105597 NM_019844 BC022843 AK055874 BC070264	-359359	+	NM_021094 AK296044	164825	-	NM_000415 J04422 X14904	202821	+	AF279784 NM_134431	225363	-	BC020696|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##NM_006446|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC070172|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AB026257|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC114376|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC054878|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC105596|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AK312970|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AF401642|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)##NM_001009562|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)##BC058006|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC105597|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_019844|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC022843|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##AK055874|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC070264|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_021094|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2##AK296044|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2##NM_000415|IAPP|3375|islet amyloid polypeptide##J04422|IAPP|3375|islet amyloid polypeptide##X14904|IAPP|3375|islet amyloid polypeptide##AF279784|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2##NM_134431|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2	0.022666	
chr10	129652372	129652494	reg1005615.p2	12.553	+	NM_207426	-116896	+	NM_001030013	-304821	+	AK127465 NM_001039762	-658012	-	CU688662 TSC_hg19_v1_chr10_-_129691142	38661	-	TSC_hg19_v1_chr10_-_129691206 BC029478 NM_152311	38774	-	TSC_hg19_v1_chr10_+_129705334 BC031078 NM_006504	52889	+	NM_207426|FOXI2|399823|forkhead box I2##NM_001030013|NPS|594857|neuropeptide S##AK127465|FAM196A|642938|family with sequence similarity 196, member A##NM_001039762|FAM196A|642938|family with sequence similarity 196, member A##BC029478|CLRN3|119467|clarin 3##NM_152311|CLRN3|119467|clarin 3##BC031078|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_006504|PTPRE|5791|protein tyrosine phosphatase, receptor type, E	0.620634	CTCF.p2:5:0.621
chr19	15375002	15375137	reg1007495.p1	12.553	+	BC115002 NM_001142886	-31257	-	BC132958 BC132960 AK026061 NM_024794	-31857	-	TSC_hg19_v1_chr19_-_15311808 AB209447 NM_000435 U97669	-63271	-	AF386649 NM_014299 NM_058243 Y12059	16192	-	TSC_hg19_v1_chr19_-_15442714 BC030158 AK307664	67633	-	BC000156 TSC_hg19_v1_chr19_-_15443139	68069	-	BC115002|EPHX3|79852|epoxide hydrolase 3##NM_001142886|EPHX3|79852|epoxide hydrolase 3##BC132958|EPHX3|79852|epoxide hydrolase 3##BC132960|EPHX3|79852|epoxide hydrolase 3##AK026061|EPHX3|79852|epoxide hydrolase 3##NM_024794|EPHX3|79852|epoxide hydrolase 3##AB209447|NOTCH3|4854|notch 3##NM_000435|NOTCH3|4854|notch 3##U97669|NOTCH3|4854|notch 3##AF386649|BRD4|23476|bromodomain containing 4##NM_014299|BRD4|23476|bromodomain containing 4##NM_058243|BRD4|23476|bromodomain containing 4##Y12059|BRD4|23476|bromodomain containing 4##BC030158|BRD4|23476|bromodomain containing 4##AK307664|BRD4|23476|bromodomain containing 4##BC000156|BRD4|23476|bromodomain containing 4	0.991064	CTCF.p2:-8:0.991
chr19	35605616	35605758	reg1006525.p1	12.552	+	TSC_hg19_v1_chr19_+_35550794 X07002	-54877	+	TSC_hg19_v1_chr19_+_35532642 AK315655	-73031	+	TSC_hg19_v1_chr19_+_35532623 BC025716	-73061	+	NM_001136007 NM_001136008 NM_001136009 NM_001136010 NM_001136011 NM_001136012 NM_005971 NM_021910 BC090044 U28249	1077	+	X93036 TSC_hg19_v1_chr19_+_35607221 BC005238 AK311689	1534	+	AJ487959 BC136694 BC136697 BC087848 AY358121 AF467954 TSC_hg19_v1_chr19_-_35625958	20099	-	X07002|HPN|3249|hepsin##AK315655|HPN|3249|hepsin##BC025716|HPN|3249|hepsin##NM_001136007|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136008|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136009|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136010|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136011|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136012|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_005971|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_021910|FXYD3|5349|FXYD domain containing ion transport regulator 3##BC090044|FXYD3|5349|FXYD domain containing ion transport regulator 3##U28249|FXYD3|5349|FXYD domain containing ion transport regulator 3##X93036|FXYD3|5349|FXYD domain containing ion transport regulator 3##BC005238|FXYD3|5349|FXYD domain containing ion transport regulator 3##AK311689|FXYD3|5349|FXYD domain containing ion transport regulator 3##AJ487959|LGI4|163175|leucine-rich repeat LGI family, member 4##BC136694|LGI4|163175|leucine-rich repeat LGI family, member 4##BC136697|LGI4|163175|leucine-rich repeat LGI family, member 4##BC087848|LGI4|163175|leucine-rich repeat LGI family, member 4##AY358121|LGI4|163175|leucine-rich repeat LGI family, member 4##AF467954|LGI4|163175|leucine-rich repeat LGI family, member 4	0.900783	CTCF.p2:-4:0.901
chr6	27577197	27577317	reg1007401.p1	12.552	+	TSC_hg19_v1_chr6_-_27440879 BC022992 AK123011 AK312804 NM_007149	-136556	-	TSC_hg19_v1_chr6_+_27356537 NM_001076781 AK092633 AK294965 AX747641 BC132797	-220702	+	AF352327 AF336874 BC107050 NM_032030	-284699	+	EU446971 TSC_hg19_v1_chr6_-_27775708 NM_003519 AK312114 BC093759 BC093761	198466	-	BC112254 BC112256 TSC_hg19_v1_chr6_+_27775950 AK311766 BC062305 NM_003509 HQ258047	198684	+	BC007518 TSC_hg19_v1_chr6_+_27777828 AK311991 NM_003536 EU446975 BC096128 BC096129 BC096130 BC143046 BC148243 BC148250	200525	+	BC022992|ZNF184|7738|zinc finger protein 184##AK123011|ZNF184|7738|zinc finger protein 184##AK312804|ZNF184|7738|zinc finger protein 184##NM_007149|ZNF184|7738|zinc finger protein 184##NM_001076781|ZNF391|346157|zinc finger protein 391##AK092633|ZNF391|346157|zinc finger protein 391##AK294965|ZNF391|346157|zinc finger protein 391##BC132797|ZNF391|346157|zinc finger protein 391##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83##EU446971|HIST1H2BL|8340|histone cluster 1, H2bl##NM_003519|HIST1H2BL|8340|histone cluster 1, H2bl##AK312114|HIST1H2BL|8340|histone cluster 1, H2bl##BC093759|HIST1H2BL|8340|histone cluster 1, H2bl##BC093761|HIST1H2BL|8340|histone cluster 1, H2bl##BC112254|HIST1H2AI|8329|histone cluster 1, H2ai##BC112256|HIST1H2AI|8329|histone cluster 1, H2ai##AK311766|HIST1H2AI|8329|histone cluster 1, H2ai##BC062305|HIST1H3F|8968|histone cluster 1, H3f##NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai##HQ258047|HIST1H2AM|8336|histone cluster 1, H2am##BC007518|HIST1H3H|8357|histone cluster 1, H3h##AK311991|HIST1H3H|8357|histone cluster 1, H3h##NM_003536|HIST1H3H|8357|histone cluster 1, H3h##EU446975|HIST1H3H|8357|histone cluster 1, H3h##BC096128|HIST1H3H|8357|histone cluster 1, H3h##BC096129|HIST1H3H|8357|histone cluster 1, H3h##BC096130|HIST1H3H|8357|histone cluster 1, H3h##BC143046|HIST1H3H|8357|histone cluster 1, H3h##BC148243|HIST1H3H|8357|histone cluster 1, H3h##BC148250|HIST1H3H|8357|histone cluster 1, H3h	0.991892	CTCF.p2:-2:0.992
chr8	21066	21200	reg1007874.p1	12.552	+	None	None	None	None	None	None	None	None	None	NM_001005504	95890	-	AK127000 TSC_hg19_v1_chr8_-_182246 BC064938 BC052779	161139	-	NM_173539 AK093442 AX748129 TSC_hg19_v1_chr8_+_182396 AK313454 NM_001042415 NM_001042416 BC026190	161209	+	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21##AK127000|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC064938|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC052779|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##NM_173539|ZNF596|169270|zinc finger protein 596##AK313454|ZNF596|169270|zinc finger protein 596##NM_001042415|ZNF596|169270|zinc finger protein 596##NM_001042416|ZNF596|169270|zinc finger protein 596##BC026190|ZNF596|169270|zinc finger protein 596	0.925753	CTCF.p2:0:0.914
chr12	27537063	27537178	reg1005232.p2	12.551	+	TSC_hg19_v1_chr12_+_27485806 AF256215 NM_001248002 NM_001248003 NM_001248004 NM_001248005 NM_020183 AK296706 AF246960 AF246961 AF246962 AF246963 BC125062 BC125061	-51241	+	TSC_hg19_v1_chr12_+_27397225 AK304755	-139895	+	TSC_hg19_v1_chr12_+_27397187 AK291055	-139933	+	BC043511 TSC_hg19_v1_chr12_-_27599649	62484	-	NM_001145010	82622	+	NM_001198915 NM_001198916 NM_003622 NM_177444 TSC_hg19_v1_chr12_+_27677138 BC022873 BC001560 AK294267 AB033056 BC050281 AB049149 AK314350 AF034802 BC046159	140015	+	AF256215|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248002|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248003|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248004|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248005|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_020183|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AK296706|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246960|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246961|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246962|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246963|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##BC125062|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##BC125061|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AK304755|STK38L|23012|serine/threonine kinase 38 like##AK291055|STK38L|23012|serine/threonine kinase 38 like##BC043511|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001145010|C12orf70|341346|chromosome 12 open reading frame 70##NM_001198915|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_001198916|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_003622|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_177444|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC022873|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC001560|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK294267|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB033056|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC050281|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB049149|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK314350|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AF034802|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC046159|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	0.786562	CTCF.p2:0:0.787
chr2	126229802	126229868	reg1004704.p1	12.551	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-1446971	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-3716598	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-3735370	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	1183872	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	1183957	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	1634906	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.0	
chr8	95825827	95825958	reg1007258.p1	12.549	+	TSC_hg19_v1_chr8_+_95732206 BC126193 BC130576	-93682	+	TSC_hg19_v1_chr8_+_95732105 NM_181787 AK123682 BX538174 BX538048 BC110870	-93752	+	TSC_hg19_v1_chr8_+_95653401 BC099916 BC067098 BC019932 BC052574	-172448	+	TSC_hg19_v1_chr8_+_95835522 BC099915 AB161944 NM_017864	9656	+	TSC_hg19_v1_chr8_+_95835588 BC136754 BC144396 BC144397	9808	+	TSC_hg19_v1_chr8_-_95907430 BC007015 BC020729 NM_057749	81560	-	BC126193|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC130576|DPY19L4|286148|dpy-19-like 4 (C. elegans)##NM_181787|DPY19L4|286148|dpy-19-like 4 (C. elegans)##AK123682|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BX538174|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BX538048|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC110870|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC099916|ESRP1|54845|epithelial splicing regulatory protein 1##BC067098|ESRP1|54845|epithelial splicing regulatory protein 1##BC019932|ESRP1|54845|epithelial splicing regulatory protein 1##BC052574|ESRP1|54845|epithelial splicing regulatory protein 1##BC099915|INTS8|55656|integrator complex subunit 8##AB161944|INTS8|55656|integrator complex subunit 8##NM_017864|INTS8|55656|integrator complex subunit 8##BC136754|INTS8|55656|integrator complex subunit 8##BC144396|INTS8|55656|integrator complex subunit 8##BC144397|INTS8|55656|integrator complex subunit 8##BC007015|CCNE2|9134|cyclin E2##BC020729|CCNE2|9134|cyclin E2##NM_057749|CCNE2|9134|cyclin E2	0.999822	CTCF.p2:-4:1.000
chr1	110955264	110955389	reg1006221.p1	12.548	+	HQ257924 NM_006402 BC062619	-4800	-	TSC_hg19_v1_chr1_-_110950302 AF029890 AK054769	-5023	-	AY623819 CR456866 CR542130 TSC_hg19_v1_chr1_-_110950267	-5068	-	AY358683 AF333024 NM_032414 AY029225 BC025399 DQ891570 DQ894763	38465	+	NM_005549	106470	-	AK290061 NM_004974 TSC_hg19_v1_chr1_-_111148981	193656	-	HQ257924|HBXIP|10542|hepatitis B virus x interacting protein##NM_006402|HBXIP|10542|hepatitis B virus x interacting protein##BC062619|HBXIP|10542|hepatitis B virus x interacting protein##AF029890|HBXIP|10542|hepatitis B virus x interacting protein##AK054769|HBXIP|10542|hepatitis B virus x interacting protein##AY623819|HBXIP|10542|hepatitis B virus x interacting protein##CR456866|HBXIP|10542|hepatitis B virus x interacting protein##CR542130|HBXIP|10542|hepatitis B virus x interacting protein##AY358683|PROK1|84432|prokineticin 1##AF333024|PROK1|84432|prokineticin 1##NM_032414|PROK1|84432|prokineticin 1##AY029225|PROK1|84432|prokineticin 1##BC025399|PROK1|84432|prokineticin 1##DQ891570|PROK1|84432|prokineticin 1##DQ894763|PROK1|84432|prokineticin 1##NM_005549|KCNA10|3744|potassium voltage-gated channel, shaker-related subfamily, member 10##AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2	0.999808	CTCF.p2:-8:1.000
chr3	156848512	156848644	reg1004742.p2	12.548	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-304467	+	BC034397 NM_001184718	-454126	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-455163	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	29331	-	NM_020307 AK122738	29936	-	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	306072	+	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long	0.998428	CTCF.p2:16:0.998
chr13	45855308	45855429	reg1006696.p1	12.547	+	AK290675 NM_198404	-80194	-	TSC_hg19_v1_chr13_+_45694647 BC001771 X16901 AB527978 EU831971 EU832064 BT019525 X59745	-160650	+	TSC_hg19_v1_chr13_+_45694638 NM_004128 AK291545	-160754	+	TSC_hg19_v1_chr13_-_45914246 L13806 CU692614	58914	-	AY334563 CR457036 CU680324 TSC_hg19_v1_chr13_-_45915253	59869	-	BC012431 TSC_hg19_v1_chr13_-_45915280 X64899 BC040008 NM_003295 X16064 AF072098 BC007842 BC003352 BC052333	59924	-	AK290675|KCTD4|386618|potassium channel tetramerisation domain containing 4##NM_198404|KCTD4|386618|potassium channel tetramerisation domain containing 4##BC001771|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##X16901|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##EU831971|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##EU832064|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##BT019525|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##X59745|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##L13806|TPT1|7178|tumor protein, translationally-controlled 1##AY334563|TPT1|7178|tumor protein, translationally-controlled 1##CR457036|TPT1|7178|tumor protein, translationally-controlled 1##BC012431|TPT1|7178|tumor protein, translationally-controlled 1##X64899|TPT1|7178|tumor protein, translationally-controlled 1##BC040008|TPT1|7178|tumor protein, translationally-controlled 1##NM_003295|TPT1|7178|tumor protein, translationally-controlled 1##X16064|TPT1|7178|tumor protein, translationally-controlled 1##BC007842|TPT1|7178|tumor protein, translationally-controlled 1##BC003352|TPT1|7178|tumor protein, translationally-controlled 1##BC052333|TPT1|7178|tumor protein, translationally-controlled 1	0.994669	CTCF.p2:12:0.995
chr6	90650300	90650418	reg1005631.p1	12.547	+	AB527151 AF296766 NM_032602	-46173	+	BC012574 TSC_hg19_v1_chr6_+_90539629 BC027850 AF154415 BC029386 BC132828 BC132830	-110660	+	TSC_hg19_v1_chr6_+_90539598 BC056685 NM_001137667 NM_001137668 NM_012115	-110765	+	AJ271878 TSC_hg19_v1_chr6_-_91006556 NM_021813	356152	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	356253	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	646324	-	AF296766|GJA10|84694|gap junction protein, alpha 10, 62kDa##NM_032602|GJA10|84694|gap junction protein, alpha 10, 62kDa##BC012574|CASP8AP2|9994|caspase 8 associated protein 2##BC027850|CASP8AP2|9994|caspase 8 associated protein 2##AF154415|CASP8AP2|9994|caspase 8 associated protein 2##BC029386|CASP8AP2|9994|caspase 8 associated protein 2##BC132828|CASP8AP2|9994|caspase 8 associated protein 2##BC132830|CASP8AP2|9994|caspase 8 associated protein 2##BC056685|CASP8AP2|9994|caspase 8 associated protein 2##NM_001137667|CASP8AP2|9994|caspase 8 associated protein 2##NM_001137668|CASP8AP2|9994|caspase 8 associated protein 2##NM_012115|CASP8AP2|9994|caspase 8 associated protein 2##AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7	0.999348	CTCF.p2:-6:0.999
chr8	37924763	37924893	reg1007227.p1	12.547	+	TSC_hg19_v1_chr8_+_37888059 NM_004095 BC004459 AB044548 AK312011 BC058073 DQ890570 DQ893731 AB590574 BT007162 CR456769 L36055	-36788	+	AY487247 FJ170286 FJ170287 BC075017 AK313857 X70811 AK309919 AK293033 NM_000025	-100744	-	S53291 TSC_hg19_v1_chr8_-_37822825	-102009	-	NM_004674 TSC_hg19_v1_chr8_+_37963033	38193	+	TSC_hg19_v1_chr8_+_37963046 AK291750 AK293699 AB020982 AF056718 AK298483 AB385056 AK311336	38256	+	NM_001105214 AK291938 AF056717 BC015936	38574	+	NM_004095|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##BC004459|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##AB044548|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##AK312011|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##BC058073|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##DQ890570|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##DQ893731|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##BT007162|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##CR456769|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##L36055|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##AY487247|ADRB3|155|adrenergic, beta-3-, receptor##FJ170286|ADRB3|155|adrenergic, beta-3-, receptor##FJ170287|ADRB3|155|adrenergic, beta-3-, receptor##BC075017|ADRB3|155|adrenergic, beta-3-, receptor##AK313857|ADRB3|155|adrenergic, beta-3-, receptor##X70811|ADRB3|155|adrenergic, beta-3-, receptor##AK309919|ADRB3|155|adrenergic, beta-3-, receptor##AK293033|ADRB3|155|adrenergic, beta-3-, receptor##NM_000025|ADRB3|155|adrenergic, beta-3-, receptor##S53291|ADRB3|155|adrenergic, beta-3-, receptor##NM_004674|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK291750|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK293699|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AB020982|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AF056718|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK298483|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK311336|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##NM_001105214|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK291938|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AF056717|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##BC015936|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)	0.946892	CTCF.p2:1:0.947
chr9	138756432	138756558	reg1007242.p1	12.547	+	AK127272 NM_020822 AB037843 BC136618 BC144304 BC171770	-162451	+	AY884306 AY902244 BC031861 NM_001012415 NM_001101677	-165150	-	AB463839 AY301270 NM_001001676	-201328	+	TSC_hg19_v1_chr9_-_138799245 NM_015447	42666	-	CU678830 DQ892567 DQ895782 TSC_hg19_v1_chr9_-_138853062 BC011822	96544	-	TSC_hg19_v1_chr9_-_138853220 AF176796 BC004967 NM_016172	96708	-	AK127272|KCNT1|57582|potassium channel, subfamily T, member 1##NM_020822|KCNT1|57582|potassium channel, subfamily T, member 1##AB037843|KCNT1|57582|potassium channel, subfamily T, member 1##BC136618|KCNT1|57582|potassium channel, subfamily T, member 1##BC144304|KCNT1|57582|potassium channel, subfamily T, member 1##BC171770|KCNT1|57582|potassium channel, subfamily T, member 1##AY884306|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##AY902244|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##BC031861|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##NM_001012415|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##NM_001101677|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##AY301270|LCN9|392399|lipocalin 9##NM_001001676|LCN9|392399|lipocalin 9##NM_015447|CAMSAP1|157922|calmodulin regulated spectrin-associated protein 1##DQ892567|UBAC1|10422|UBA domain containing 1##DQ895782|UBAC1|10422|UBA domain containing 1##BC011822|UBAC1|10422|UBA domain containing 1##AF176796|UBAC1|10422|UBA domain containing 1##BC004967|UBAC1|10422|UBA domain containing 1##NM_016172|UBAC1|10422|UBA domain containing 1	0.972961	CTCF.p2:-1:0.973
chr17	36151449	36151591	reg1006668.p1	12.545	+	TSC_hg19_v1_chr17_-_36105051 HM116553 HM116554 HM116555 HM116556 AK290131 AK296633 AK298393 BC017714 X58840 NM_000458 NM_001165923	-46469	-	AB528419 BT007126 CR536572 DQ891528 EU176615 TSC_hg19_v1_chr17_-_36104898	-46634	-	TSC_hg19_v1_chr17_-_36003470 AF077033 AK001652 AK093661 AX748248 BC041785 NM_007010	-148043	-	NM_001123391 NM_032258 AK313329 AK302064 BC078140 BC071680 AK301823 AL136860 BC047739	132473	+	BC033670 BC047739 AL136860 AK301823 BC071680 BC078140 AK302064 AK313329 NM_001123391 NM_032258	197105	-	BC067792 TSC_hg19_v1_chr17_-_36413224	261717	-	HM116553|HNF1B|6928|HNF1 homeobox B##HM116554|HNF1B|6928|HNF1 homeobox B##HM116555|HNF1B|6928|HNF1 homeobox B##HM116556|HNF1B|6928|HNF1 homeobox B##AK290131|HNF1B|6928|HNF1 homeobox B##AK296633|HNF1B|6928|HNF1 homeobox B##AK298393|HNF1B|6928|HNF1 homeobox B##BC017714|HNF1B|6928|HNF1 homeobox B##X58840|HNF1B|6928|HNF1 homeobox B##NM_000458|HNF1B|6928|HNF1 homeobox B##NM_001165923|HNF1B|6928|HNF1 homeobox B##BT007126|HNF1B|6928|HNF1 homeobox B##CR536572|HNF1B|6928|HNF1 homeobox B##DQ891528|HNF1B|6928|HNF1 homeobox B##EU176615|HNF1B|6928|HNF1 homeobox B##AF077033|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK001652|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK093661|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC041785|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_007010|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##AK313329|TBC1D3|729873|TBC1 domain family, member 3##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##AK302064|TBC1D3|729873|TBC1 domain family, member 3##AK313329|TBC1D3|729873|TBC1 domain family, member 3##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##BC067792|LOC440434|440434|aminopeptidase puromycin sensitive pseudogene	0.67826	CTCF.p2:8:0.678
chr18	12391793	12391909	reg1005488.p1	12.545	+	TSC_hg19_v1_chr18_-_12377251 BC024282 NM_006796	-14584	-	TSC_hg19_v1_chr18_-_12377199 Y18314 BC065016	-14663	-	TSC_hg19_v1_chr18_+_12308246 AK022340 AK098440 AK304616 BC002654 NM_032525 AK298196 BC039717 AB590145 DQ893486 DQ896394	-83586	+	NM_001142405 NM_006553 AK056046 BC106750 TSC_hg19_v1_chr18_+_12407941	16070	+	AK301711 NM_001128627	264879	-	BC115005 TSC_hg19_v1_chr18_-_12657786	265910	-	BC024282|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##NM_006796|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##Y18314|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##BC065016|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##AK022340|TUBB6|84617|tubulin, beta 6 class V##AK098440|TUBB6|84617|tubulin, beta 6 class V##AK304616|TUBB6|84617|tubulin, beta 6 class V##BC002654|TUBB6|84617|tubulin, beta 6 class V##NM_032525|TUBB6|84617|tubulin, beta 6 class V##AK298196|TUBB6|84617|tubulin, beta 6 class V##DQ893486|TUBB6|84617|tubulin, beta 6 class V##DQ896394|TUBB6|84617|tubulin, beta 6 class V##NM_001142405|SLMO1|10650|slowmo homolog 1 (Drosophila)##NM_006553|SLMO1|10650|slowmo homolog 1 (Drosophila)##AK056046|SLMO1|10650|slowmo homolog 1 (Drosophila)##BC106750|SLMO1|10650|slowmo homolog 1 (Drosophila)##AK301711|SPIRE1|56907|spire homolog 1 (Drosophila)##NM_001128627|SPIRE1|56907|spire homolog 1 (Drosophila)##BC115005|SPIRE1|56907|spire homolog 1 (Drosophila)	0.013626	
chr8	133887840	133887976	reg1005101.p1	12.544	+	AK303666 NM_003235 X05615 BC140933 U93033 X02154	-8685	+	TSC_hg19_v1_chr8_+_133787633 AK290506 BC002822 BC015211	-100266	+	TSC_hg19_v1_chr8_+_133787606 NM_016018 NM_032205 NM_198513	-100325	+	AB464247 BT019994 CR536537 EU831422 EU831515 D89077 BC007042 NM_006748	184595	-	TSC_hg19_v1_chr8_-_134087203 AK311010 AK310092	199287	-	AJ238591 TSC_hg19_v1_chr8_-_134087273 AK310108 AK310115	199364	-	AK303666|TG|7038|thyroglobulin##NM_003235|TG|7038|thyroglobulin##X05615|TG|7038|thyroglobulin##BC140933|TG|7038|thyroglobulin##U93033|TG|7038|thyroglobulin##X02154|TG|7038|thyroglobulin##AK290506|PHF20L1|51105|PHD finger protein 20-like 1##BC002822|PHF20L1|51105|PHD finger protein 20-like 1##BC015211|PHF20L1|51105|PHD finger protein 20-like 1##NM_016018|PHF20L1|51105|PHD finger protein 20-like 1##NM_032205|PHF20L1|51105|PHD finger protein 20-like 1##NM_198513|PHF20L1|51105|PHD finger protein 20-like 1##BT019994|SLA|6503|Src-like-adaptor##CR536537|SLA|6503|Src-like-adaptor##EU831422|SLA|6503|Src-like-adaptor##EU831515|SLA|6503|Src-like-adaptor##D89077|SLA|6503|Src-like-adaptor##BC007042|SLA|6503|Src-like-adaptor##NM_006748|SLA|6503|Src-like-adaptor##AK311010|SLA|6503|Src-like-adaptor##AK310092|SLA|6503|Src-like-adaptor##AJ238591|SLA|6503|Src-like-adaptor##AK310108|SLA|6503|Src-like-adaptor##AK310115|SLA|6503|Src-like-adaptor	0.998286	CTCF.p2:-6:0.998
chr8	10131492	10131634	reg1006949.p1	12.543	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	-178500	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	-219684	+	TSC_hg19_v1_chr8_+_9911765 AY958429	-219794	+	BC033497 NM_001197020 NM_198464 AY358867	251504	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	381077	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	398596	+	AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AY958429|MSRA|4482|methionine sulfoxide reductase A##BC033497|PRSS55|203074|protease, serine, 55##NM_001197020|PRSS55|203074|protease, serine, 55##NM_198464|PRSS55|203074|protease, serine, 55##AY358867|PRSS55|203074|protease, serine, 55##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74	0.972991	CTCF.p2:11:0.973
chr19	17981199	17981335	reg1006705.p1	12.542	+	TSC_hg19_v1_chr19_+_17970726 BC066319 AK297323 AK222647 AK311774 D28393 NM_000980 AK297358 AK300809 BC007512 BC071920 L05093 X80822 AB528676 CU688140	-10550	+	TSC_hg19_v1_chr19_-_17958822 U31601 AK296383 NM_000215 AK304392	-22421	-	TSC_hg19_v1_chr19_-_17958781 BC028068	-22478	-	BX648217 NM_000453 U66088 D87920	1563	+	TSC_hg19_v1_chr19_+_18043824 NM_001136203	62557	+	BC013949 NM_138442	64637	+	BC066319|RPL18A|6142|ribosomal protein L18a##AK297323|RPL18A|6142|ribosomal protein L18a##AK222647|RPL18A|6142|ribosomal protein L18a##AK311774|RPL18A|6142|ribosomal protein L18a##D28393|RPL18A|6142|ribosomal protein L18a##NM_000980|RPL18A|6142|ribosomal protein L18a##AK297358|RPL18A|6142|ribosomal protein L18a##AK300809|RPL18A|6142|ribosomal protein L18a##BC007512|RPL18A|6142|ribosomal protein L18a##BC071920|RPL18A|6142|ribosomal protein L18a##L05093|RPL18A|6142|ribosomal protein L18a##X80822|RPL18A|6142|ribosomal protein L18a##U31601|JAK3|3718|Janus kinase 3##AK296383|JAK3|3718|Janus kinase 3##NM_000215|JAK3|3718|Janus kinase 3##AK304392|JAK3|3718|Janus kinase 3##BC028068|JAK3|3718|Janus kinase 3##BX648217|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##NM_000453|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##U66088|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##D87920|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##NM_001136203|CCDC124|115098|coiled-coil domain containing 124##BC013949|CCDC124|115098|coiled-coil domain containing 124##NM_138442|CCDC124|115098|coiled-coil domain containing 124	0.889743	CTCF.p2:0:0.890
chr22	39930919	39931042	reg1005692.p1	12.542	+	TSC_hg19_v1_chr22_-_39928773 CR456443 BC037573 NM_194326	-2166	-	BC047711 TSC_hg19_v1_chr22_-_39928752 AK025423	-2229	-	TSC_hg19_v1_chr22_-_39928750 CU013041 CU013329	-2280	-	AF129133 AF142567 AF211189 AF393329 NM_001003406 NM_021096	35777	+	BC033895 NM_152512	358813	-	AY069959 NM_004810 TSC_hg19_v1_chr22_+_40297087 AK303332 AK303512 AF236119 AJ011736 BC025692 AF042380 AF102694	366144	+	CR456443|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC037573|RPS19BP1|91582|ribosomal protein S19 binding protein 1##NM_194326|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC047711|RPS19BP1|91582|ribosomal protein S19 binding protein 1##AK025423|RPS19BP1|91582|ribosomal protein S19 binding protein 1##CU013041|RPS19BP1|91582|ribosomal protein S19 binding protein 1##CU013329|RPS19BP1|91582|ribosomal protein S19 binding protein 1##AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##BC033895|ENTHD1|150350|ENTH domain containing 1##NM_152512|ENTHD1|150350|ENTH domain containing 1##AY069959|GRAP2|9402|GRB2-related adaptor protein 2##NM_004810|GRAP2|9402|GRB2-related adaptor protein 2##AK303332|GRAP2|9402|GRB2-related adaptor protein 2##AK303512|GRAP2|9402|GRB2-related adaptor protein 2##AF236119|GRAP2|9402|GRB2-related adaptor protein 2##AJ011736|GRAP2|9402|GRB2-related adaptor protein 2##BC025692|GRAP2|9402|GRB2-related adaptor protein 2##AF042380|GRAP2|9402|GRB2-related adaptor protein 2##AF102694|GRAP2|9402|GRB2-related adaptor protein 2	0.962579	CTCF.p2:-17:0.963
chr6	11172852	11172986	reg1005712.p1	12.542	+	AK123938 BC068585 NM_207582	-60907	-	BC032356 NM_001135575 TSC_hg19_v1_chr6_+_11094342	-78616	+	TSC_hg19_v1_chr6_+_11094066 AK058186	-78862	+	U64317 BC020686 TSC_hg19_v1_chr6_-_11232894 BC050740 BC040207	59972	-	L43821 TSC_hg19_v1_chr6_-_11232900	59981	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	59991	-	AK123938|ERVFRD-1|405754|endogenous retrovirus group FRD, member 1##BC068585|ERVFRD-1|405754|endogenous retrovirus group FRD, member 1##NM_207582|ERVFRD-1|405754|endogenous retrovirus group FRD, member 1##BC032356|C6orf228|221710|chromosome 6 open reading frame 228##NM_001135575|C6orf228|221710|chromosome 6 open reading frame 228##AK058186|C6orf228|221710|chromosome 6 open reading frame 228##U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9	0.995749	CTCF.p2:-4:0.996
chr8	7771092	7771210	reg1005967.p1	12.541	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-18947	+	AF295370 AJ237673 NM_018661 AB037972 AB590071 AF217245 AF516673	-32226	+	AF301470 NM_001081551	-32426	+	AK292586 NM_001193630	12707	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	314991	+	TSC_hg19_v1_chr8_-_8175862 AF075060	404737	-	BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF295370|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##AF301470|DEFB103B|55894|defensin, beta 103B##NM_001081551|DEFB103A|414325|defensin, beta 103A##AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AF075060|SGK223|157285|homolog of rat pragma of Rnd2	0.996209	CTCF.p2:-15:0.996
chr1	116775642	116775779	reg1005453.p1	12.540	+	AK096035 NM_152367	-121335	+	TSC_hg19_v1_chr1_+_116519194 BC070033 AY358258 AY145501 CU693234 DQ892367 DQ895576	-256481	+	NM_018420 BC026358 TSC_hg19_v1_chr1_+_116519161	-256567	+	NM_000701 TSC_hg19_v1_chr1_+_116915824	140101	+	BC003077 TSC_hg19_v1_chr1_+_116915881 BC050359	140172	+	TSC_hg19_v1_chr1_+_116915952 AK314777	140238	+	AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)##BC070033|SLC22A15|55356|solute carrier family 22, member 15##AY358258|SLC22A15|55356|solute carrier family 22, member 15##AY145501|SLC22A15|55356|solute carrier family 22, member 15##DQ892367|SLC22A15|55356|solute carrier family 22, member 15##DQ895576|SLC22A15|55356|solute carrier family 22, member 15##NM_018420|SLC22A15|55356|solute carrier family 22, member 15##BC026358|SLC22A15|55356|solute carrier family 22, member 15##NM_000701|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC003077|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC050359|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK314777|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.0	
chr4	100039403	100039544	reg1007509.p1	12.540	+	TSC_hg19_v1_chr4_+_100010018 BX647987	-29458	+	TSC_hg19_v1_chr4_-_100009912 NM_000671	-29552	-	TSC_hg19_v1_chr4_-_100009865 AK129570 BC070491 AK312367 M29872	-29590	-	CU692552 M15943 TSC_hg19_v1_chr4_-_100065449 AK290835 AK295556 AK313649 BC022319 NM_000670	25938	-	AK316326 BC039065 TSC_hg19_v1_chr4_-_100140401 AK092768 NM_000672 NM_001102470	100894	-	M12271 BC074738 BC117442 BC126306 AK290558 M12963 AK309597 NM_000667	172661	-	BX647987|LOC100507053|100507053|uncharacterized LOC100507053##NM_000671|ADH5|128|alcohol dehydrogenase 5 (class III), chi polypeptide##AK129570|ADH5|128|alcohol dehydrogenase 5 (class III), chi polypeptide##BC070491|ADH5|128|alcohol dehydrogenase 5 (class III), chi polypeptide##AK312367|ADH5|128|alcohol dehydrogenase 5 (class III), chi polypeptide##M29872|ADH5|128|alcohol dehydrogenase 5 (class III), chi polypeptide##M15943|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide##AK290835|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide##AK295556|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide##AK313649|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide##BC022319|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide##NM_000670|ADH4|127|alcohol dehydrogenase 4 (class II), pi polypeptide##AK316326|ADH6|130|alcohol dehydrogenase 6 (class V)##BC039065|ADH6|130|alcohol dehydrogenase 6 (class V)##AK092768|ADH6|130|alcohol dehydrogenase 6 (class V)##NM_000672|ADH6|130|alcohol dehydrogenase 6 (class V)##NM_001102470|ADH6|130|alcohol dehydrogenase 6 (class V)##M12271|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##BC074738|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##BC117442|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##BC126306|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##AK290558|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##M12963|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##AK309597|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##NM_000667|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide	0.980817	CTCF.p2:-17:0.981
chr6	150656376	150656503	reg1005563.p1	12.540	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-192198	+	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	-266226	-	BC131600 AB528849 AY039682 NM_130900	-309806	-	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	33719	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	264581	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	530393	+	NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.191151	
chrX	129059730	129059870	reg1007842.p1	12.540	+	TSC_hg19_v1_chrX_+_129040144 NM_001166221 NM_006649 AK291918 AK298578 BC009649 BC001149 AK304563 BC014987 AF039694 AB590128 CU679427 DQ892549 DQ895760	-19669	+	TSC_hg19_v1_chrX_-_128977856 AL161962 AK096967 AF151847 AY358558 BC006200 BC012826 BC003128 AK001112 AY952881 NM_016032	-81972	-	AK001524 BC000035 AB209807 TSC_hg19_v1_chrX_-_128977481 NM_001008222	-82375	-	NM_021946 TSC_hg19_v1_chrX_+_129139243 AK074089	79406	+	TSC_hg19_v1_chrX_-_129244438 U32645	184644	-	TSC_hg19_v1_chrX_-_129244474 NM_001421	184678	-	NM_001166221|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_006649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK291918|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK298578|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC009649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC001149|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK304563|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC014987|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ892549|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ895760|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_021946|BCORL1|63035|BCL6 corepressor-like 1##AK074089|BCORL1|63035|BCL6 corepressor-like 1##U32645|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001421|ELF4|2000|E74-like factor 4 (ets domain transcription factor)	0.781596	CTCF.p2:0:0.744
chr1	47641136	47641250	reg1005228.p1	12.539	+	TSC_hg19_v1_chr1_+_47603114 BC148248 AY280371 NM_001010969 BC142690 BC142607 AY280372	-38071	+	AY358631 AK292175 AY262056 NM_178134 AB527374	-108089	+	BC028102 NM_178033 AK098065 AY358537 AM040940 DQ891655 DQ891656 DQ894843 EU176287 CU688398	-151830	+	CR450304 CU680280 BC012303 TSC_hg19_v1_chr1_-_47655693	14455	-	TSC_hg19_v1_chr1_-_47655728 NM_005764	14553	-	M61108 NM_003189	54249	-	BC148248|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280371|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##NM_001010969|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142690|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142607|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280372|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY358631|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##AK292175|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##AY262056|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##NM_178134|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##BC028102|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##NM_178033|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AK098065|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AY358537|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AM040940|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891655|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891656|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ894843|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##EU176287|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##CR450304|PDZK1IP1|10158|PDZK1 interacting protein 1##BC012303|PDZK1IP1|10158|PDZK1 interacting protein 1##NM_005764|PDZK1IP1|10158|PDZK1 interacting protein 1##M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1##NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1	0.076991	
chr15	40167292	40167414	reg1007445.p1	12.539	+	AK091251 TSC_hg19_v1_chr15_+_40075106	-92247	+	AK093308 AX748045 BC045191 NM_152597	-92325	-	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	-294024	+	CU688250 TSC_hg19_v1_chr15_-_40212342	44932	-	BC067106 TSC_hg19_v1_chr15_-_40212465	45135	-	TSC_hg19_v1_chr15_-_40213138 D38449 NM_007223	45774	-	AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##BC067106|GPR176|11245|G protein-coupled receptor 176##D38449|GPR176|11245|G protein-coupled receptor 176##NM_007223|GPR176|11245|G protein-coupled receptor 176	0.939882	CTCF.p2:-1:0.940
chr16	66623422	66623546	reg1004966.p1	12.538	+	AY862139 NM_001199317 NM_144673 AF479260 BC025354 AK098598 CU692974 DQ892836 EU176735	-10055	+	NM_181269 NM_181270 NM_181271 NM_181272 NM_181283 NM_181296 AY174118 AY174119 AY174120 AY174121 AY174122 AY174123 AY174124 AY174125 AY174126 AY174127 AY174128 AY174129 AY174130 AY174131 AY174132 AY174133 TSC_hg19_v1_chr16_+_66600302 BC057852 NM_052999 NM_181268 BC018586	-23132	+	TSC_hg19_v1_chr16_+_66586551 AB590157 DQ893388 DQ896708	-36916	+	AK056324 TSC_hg19_v1_chr16_+_66638053	14512	+	TSC_hg19_v1_chr16_+_66638261 NM_144601 AF479813	14763	+	TSC_hg19_v1_chr16_+_66638606 BC047701 NM_181553 BC036042 BC040227	15090	+	AY862139|CMTM2|146225|CKLF-like MARVEL transmembrane domain containing 2##NM_001199317|CMTM2|146225|CKLF-like MARVEL transmembrane domain containing 2##NM_144673|CMTM2|146225|CKLF-like MARVEL transmembrane domain containing 2##AF479260|CMTM2|146225|CKLF-like MARVEL transmembrane domain containing 2##BC025354|CMTM2|146225|CKLF-like MARVEL transmembrane domain containing 2##AK098598|CMTM2|146225|CKLF-like MARVEL transmembrane domain containing 2##DQ892836|CMTM2|146225|CKLF-like MARVEL transmembrane domain containing 2##EU176735|CMTM2|146225|CKLF-like MARVEL transmembrane domain containing 2##NM_181269|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##NM_181270|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##NM_181271|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##NM_181272|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##NM_181283|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##NM_181296|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174118|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174119|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174120|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174121|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174122|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174123|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174124|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174125|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174126|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174127|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174128|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174129|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174130|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174131|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174132|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##AY174133|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##BC057852|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##NM_052999|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##NM_181268|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##BC018586|CMTM1|113540|CKLF-like MARVEL transmembrane domain containing 1##DQ893388|CKLF|51192|chemokine-like factor##DQ896708|CKLF|51192|chemokine-like factor##AK056324|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##NM_144601|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##AF479813|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC047701|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##NM_181553|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC036042|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC040227|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3	0.183005	
chr2	197876902	197877033	reg1007929.p1	12.538	+	AB128038 AB527353 TSC_hg19_v1_chr2_-_197791382 BX648642 AK022439 NM_024989 BC040517	-85523	-	BC137150 BC137151 AY358249 NM_213608	-202030	-	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	-212554	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	298415	-	TSC_hg19_v1_chr2_-_198175459 BC063622	298506	-	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	298552	-	AB128038|PGAP1|80055|post-GPI attachment to proteins 1##BX648642|PGAP1|80055|post-GPI attachment to proteins 1##AK022439|PGAP1|80055|post-GPI attachment to proteins 1##NM_024989|PGAP1|80055|post-GPI attachment to proteins 1##BC040517|PGAP1|80055|post-GPI attachment to proteins 1##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK124039|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44	0.892187	CTCF.p2:-8:0.892
chr3	185026016	185026141	reg1006354.p1	12.538	+	TSC_hg19_v1_chr3_+_185000783 NM_001242314 NM_001242317 AK297646 BC036593 AK312714 BC015996	-25329	+	BC038948 BC110460 L07077 AK301521 TSC_hg19_v1_chr3_-_184971838 AK223460 AK291798 BC011030 BC030982 NM_001166415 NM_001966	-54228	-	TSC_hg19_v1_chr3_-_184870849 AK091454 AX746993 NM_001025266	-155280	-	AK302951 TSC_hg19_v1_chr3_+_185046682 BC031677	20613	+	BC026249 NM_004721 AK296961 AB001872 BC111726	54854	+	TSC_hg19_v1_chr3_-_185216824 EU831805 EU831882 AK313954 BC019884 BC008043 BX647928 AY358547 AK172748 AK290878 NM_080652	190621	-	NM_001242314|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_001242317|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK297646|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC036593|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK312714|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC015996|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001025266|C3orf70|285382|chromosome 3 open reading frame 70##AK302951|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC031677|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##EU831805|TMEM41A|90407|transmembrane protein 41A##EU831882|TMEM41A|90407|transmembrane protein 41A##AK313954|TMEM41A|90407|transmembrane protein 41A##BC019884|TMEM41A|90407|transmembrane protein 41A##BC008043|TMEM41A|90407|transmembrane protein 41A##BX647928|TMEM41A|90407|transmembrane protein 41A##AY358547|TMEM41A|90407|transmembrane protein 41A##AK172748|TMEM41A|90407|transmembrane protein 41A##AK290878|TMEM41A|90407|transmembrane protein 41A##NM_080652|TMEM41A|90407|transmembrane protein 41A	0.571415	CTCF.p2:15:0.571
chr2	72151198	72151322	reg1007566.p1	12.537	+	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-457367	+	NM_001130976 NM_001130977 NM_001130978 NM_001130979 NM_001130980 NM_001130981 NM_003494 AF075575 BC171803 EU515155 EU515156 EU515157 EU515158 EU515159 EU515160	-470459	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	-592363	+	AK295683 TSC_hg19_v1_chr2_-_72371202	219939	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	223682	-	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	901844	-	DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130976|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130977|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130978|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130979|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130980|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130981|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_003494|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AF075575|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##BC171803|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515155|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515156|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515157|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515158|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515159|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515160|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B	0.999611	CTCF.p2:3:1.000
chr10	88470947	88471082	reg1007660.p1	12.536	+	AK304760 TSC_hg19_v1_chr10_+_88428267 AK300692 AK297871 NM_001080116 AJ133766 BC010929 NM_001080114 NM_001080115 NM_001171611 NM_007078 AB014513 AF276807 AF276808 AF276809 AJ133767 AJ133768	-42659	+	TSC_hg19_v1_chr10_+_88428170 NM_001171610	-42828	+	TSC_hg19_v1_chr10_+_88426539 AK294696	-44469	+	TSC_hg19_v1_chr10_+_88516526 NM_004329 BC028383 AK291764 Z22535	45473	+	TSC_hg19_v1_chr10_-_88717330 BC072456 AK304727 AK023527 AK293822 BC094744 BC064415 AK308401 NM_024756	246357	-	NM_003087 AK223367 AK311652 BC014098 AK312141 AF017256 AF411524 EU019993 AF010126 DQ892334 DQ892505 DQ895719 EU176715 AB464279 CR541788 CR541790	247356	+	AK304760|LDB3|11155|LIM domain binding 3##AK300692|LDB3|11155|LIM domain binding 3##AK297871|LDB3|11155|LIM domain binding 3##NM_001080116|LDB3|11155|LIM domain binding 3##AJ133766|LDB3|11155|LIM domain binding 3##BC010929|LDB3|11155|LIM domain binding 3##NM_001080114|LDB3|11155|LIM domain binding 3##NM_001080115|LDB3|11155|LIM domain binding 3##NM_001171611|LDB3|11155|LIM domain binding 3##NM_007078|LDB3|11155|LIM domain binding 3##AB014513|LDB3|11155|LIM domain binding 3##AF276807|LDB3|11155|LIM domain binding 3##AF276808|LDB3|11155|LIM domain binding 3##AF276809|LDB3|11155|LIM domain binding 3##AJ133767|LDB3|11155|LIM domain binding 3##AJ133768|LDB3|11155|LIM domain binding 3##NM_001171610|LDB3|11155|LIM domain binding 3##AK294696|LDB3|11155|LIM domain binding 3##NM_004329|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC028383|BMPR1A|657|bone morphogenetic protein receptor, type IA##AK291764|BMPR1A|657|bone morphogenetic protein receptor, type IA##Z22535|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC072456|MMRN2|79812|multimerin 2##AK304727|MMRN2|79812|multimerin 2##AK023527|MMRN2|79812|multimerin 2##AK293822|MMRN2|79812|multimerin 2##BC094744|MMRN2|79812|multimerin 2##BC064415|MMRN2|79812|multimerin 2##AK308401|MMRN2|79812|multimerin 2##NM_024756|MMRN2|79812|multimerin 2##NM_003087|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK223367|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##BC014098|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK312141|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF017256|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF411524|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU019993|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF010126|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892334|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892505|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ895719|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU176715|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541788|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541790|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)	0.0	
chr17	8204066	8204195	reg1006931.p1	12.536	+	TSC_hg19_v1_chr17_-_8198679 BC105995 BC041597 BC052233	-5456	-	AY498866 BC101330 BC101329 AK097536 NM_201520	-5984	-	AF168714 TSC_hg19_v1_chr17_+_8191987 NM_001177801 NM_001177802 NM_016492 AK290399 BC100017 AF151070 AF265205 AF265206 CR749387 AF161514 BC012552 BC006486 CR457206	-12170	+	NM_173728 AK291626 AK023853 BC036749	9447	+	AK300327 NM_025014 AB020722	10019	+	AB081120 AY237799 FJ235526 NM_153007 BC112010 BC112014	39100	+	BC105995|SLC25A35|399512|solute carrier family 25, member 35##BC041597|SLC25A35|399512|solute carrier family 25, member 35##BC052233|SLC25A35|399512|solute carrier family 25, member 35##AY498866|SLC25A35|399512|solute carrier family 25, member 35##BC101330|SLC25A35|399512|solute carrier family 25, member 35##BC101329|SLC25A35|399512|solute carrier family 25, member 35##AK097536|SLC25A35|399512|solute carrier family 25, member 35##NM_201520|SLC25A35|399512|solute carrier family 25, member 35##AF168714|RANGRF|29098|RAN guanine nucleotide release factor##NM_001177801|RANGRF|29098|RAN guanine nucleotide release factor##NM_001177802|RANGRF|29098|RAN guanine nucleotide release factor##NM_016492|RANGRF|29098|RAN guanine nucleotide release factor##AK290399|RANGRF|29098|RAN guanine nucleotide release factor##BC100017|RANGRF|29098|RAN guanine nucleotide release factor##AF151070|RANGRF|29098|RAN guanine nucleotide release factor##AF265205|RANGRF|29098|RAN guanine nucleotide release factor##AF265206|RANGRF|29098|RAN guanine nucleotide release factor##CR749387|RANGRF|29098|RAN guanine nucleotide release factor##AF161514|RANGRF|29098|RAN guanine nucleotide release factor##BC012552|RANGRF|29098|RAN guanine nucleotide release factor##BC006486|RANGRF|29098|RAN guanine nucleotide release factor##CR457206|RANGRF|29098|RAN guanine nucleotide release factor##NM_173728|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15##AK291626|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15##AK023853|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15##BC036749|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15##AK300327|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15##NM_025014|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15##AB020722|ARHGEF15|22899|Rho guanine nucleotide exchange factor (GEF) 15##AB081120|ODF4|146852|outer dense fiber of sperm tails 4##AY237799|ODF4|146852|outer dense fiber of sperm tails 4##FJ235526|ODF4|146852|outer dense fiber of sperm tails 4##NM_153007|ODF4|146852|outer dense fiber of sperm tails 4##BC112010|ODF4|146852|outer dense fiber of sperm tails 4##BC112014|ODF4|146852|outer dense fiber of sperm tails 4	0.160979	
chr2	112645429	112645547	reg1005395.p1	12.536	+	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	-3727	-	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	-3862	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-767001	+	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	10697	+	TSC_hg19_v1_chr2_+_112656224 BC114917 BC114918	10732	+	NM_032824 AK027587 TSC_hg19_v1_chr2_+_112812871	167353	+	AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase##BC114917|MERTK|10461|c-mer proto-oncogene tyrosine kinase##BC114918|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_032824|TMEM87B|84910|transmembrane protein 87B##AK027587|TMEM87B|84910|transmembrane protein 87B	0.998636	CTCF.p2:2:0.999
chr7	100835912	100836021	reg1005085.p2	12.536	+	BC037583 BC104841 AK096556 NM_198571	-12441	-	BC063835 BC044212 TSC_hg19_v1_chr7_-_100808851 AK225839 NM_003378 BC036537	-27114	-	NM_001283 TSC_hg19_v1_chr7_+_100797756 AK312151 BC003561 AB015319	-38238	+	BC100953 BC100954 BC100955 AY358200 AY229854 NM_178176	8280	-	TSC_hg19_v1_chr7_-_100858312 BC018946	22402	-	AF068229 AY220458 TSC_hg19_v1_chr7_-_100860713	24700	-	BC037583|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##BC104841|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##AK096556|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##NM_198571|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##BC063835|VGF|7425|VGF nerve growth factor inducible##BC044212|VGF|7425|VGF nerve growth factor inducible##AK225839|VGF|7425|VGF nerve growth factor inducible##NM_003378|VGF|7425|VGF nerve growth factor inducible##BC036537|VGF|7425|VGF nerve growth factor inducible##NM_001283|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AK312151|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC003561|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AB015319|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC100953|MOGAT3|346606|monoacylglycerol O-acyltransferase 3##BC100954|MOGAT3|346606|monoacylglycerol O-acyltransferase 3##BC100955|MOGAT3|346606|monoacylglycerol O-acyltransferase 3##AY358200|MOGAT3|346606|monoacylglycerol O-acyltransferase 3##AY229854|MOGAT3|346606|monoacylglycerol O-acyltransferase 3##NM_178176|MOGAT3|346606|monoacylglycerol O-acyltransferase 3##BC018946|PLOD3|8985|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3##AF068229|PLOD3|8985|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3##AY220458|PLOD3|8985|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	0.999914	CTCF.p2:-8:1.000
chr8	120719827	120719979	reg1007234.p1	12.536	+	EU131011 DQ891628 DQ894819 D45421 L35594 AK315253 BC034961 TSC_hg19_v1_chr8_-_120651080 NM_001040092 NM_001130863 NM_006209	-68841	-	NM_002514 AK294289 AK312355 TSC_hg19_v1_chr8_+_120428685 AY082381 X96584 BC015028 CU677181 AB463923 DQ891179 DQ894361 CR457432	-291242	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	-499264	+	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	125174	-	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	148211	-	NM_022783 TSC_hg19_v1_chr8_+_120885965 AK315175 AK225168 AK297822 AL136678 AK225675 BC024746 AK022490 BC012040 AM392576 AM393333 AB527130 AK023916	166101	+	EU131011|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ891628|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ894819|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##D45421|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##L35594|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##AK315253|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC034961|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001040092|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001130863|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_006209|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_002514|NOV|4856|nephroblastoma overexpressed gene##AK294289|NOV|4856|nephroblastoma overexpressed gene##AK312355|NOV|4856|nephroblastoma overexpressed gene##AY082381|NOV|4856|nephroblastoma overexpressed gene##X96584|NOV|4856|nephroblastoma overexpressed gene##BC015028|NOV|4856|nephroblastoma overexpressed gene##DQ891179|NOV|4856|nephroblastoma overexpressed gene##DQ894361|NOV|4856|nephroblastoma overexpressed gene##CR457432|NOV|4856|nephroblastoma overexpressed gene##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein	0.668115	CTCF.p2:18:0.668
chr5	141258841	141258978	reg1007720.p1	12.535	+	BC035812 NM_002587 NM_032420 BC051287 BC075821 TSC_hg19_v1_chr5_-_141257976 AK289512	-950	-	CU690208 TSC_hg19_v1_chr5_-_141257848	-1070	-	TSC_hg19_v1_chr5_-_141061801 NM_022481	-197092	-	TSC_hg19_v1_chr5_+_141303403 NM_001142603 NM_014773 BC007855 D50931 AK292869	44500	+	BC011926 TSC_hg19_v1_chr5_+_141303466 BC035486 BC010452 BC011269 CU680118	44575	+	AF240635 NM_016580	79717	-	BC035812|PCDH1|5097|protocadherin 1##NM_002587|PCDH1|5097|protocadherin 1##NM_032420|PCDH1|5097|protocadherin 1##BC051287|PCDH1|5097|protocadherin 1##BC075821|PCDH1|5097|protocadherin 1##AK289512|PCDH1|5097|protocadherin 1##NM_022481|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##NM_001142603|KIAA0141|9812|KIAA0141##NM_014773|KIAA0141|9812|KIAA0141##BC007855|KIAA0141|9812|KIAA0141##D50931|KIAA0141|9812|KIAA0141##AK292869|KIAA0141|9812|KIAA0141##BC011926|KIAA0141|9812|KIAA0141##BC035486|KIAA0141|9812|KIAA0141##BC010452|KIAA0141|9812|KIAA0141##BC011269|KIAA0141|9812|KIAA0141##AF240635|PCDH12|51294|protocadherin 12##NM_016580|PCDH12|51294|protocadherin 12	0.987907	CTCF.p2:11:0.988
chr12	22254013	22254134	reg1005872.p1	12.534	+	AF271388 TSC_hg19_v1_chr12_+_22199226 AF397212	-54844	+	TSC_hg19_v1_chr12_+_22199207 BC016609 NM_018686 AL832975 AK022927 AK222981	-54901	+	AK056519 TSC_hg19_v1_chr12_-_22094251 BC033804	-159823	-	BC117285 BC126162 BC031081 BC046158 AK315340 EU041716 NM_003034 X77922 TSC_hg19_v1_chr12_-_22487789	233607	-	AB385344 AB011100 BC042498 TSC_hg19_v1_chr12_-_22697128 AK299353	443066	-	BC117143 BC143859 BC143860 BC143878 TSC_hg19_v1_chr12_-_22697430 AK295862	443316	-	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##BC016609|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##NM_018686|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AL832975|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK022927|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK222981|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK056519|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##BC033804|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##BC117285|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC126162|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC031081|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC046158|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AK315340|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##EU041716|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##NM_003034|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##X77922|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AB011100|KIAA0528|9847|KIAA0528##BC042498|KIAA0528|9847|KIAA0528##AK299353|KIAA0528|9847|KIAA0528##BC117143|KIAA0528|9847|KIAA0528##BC143859|KIAA0528|9847|KIAA0528##BC143860|KIAA0528|9847|KIAA0528##BC143878|KIAA0528|9847|KIAA0528##AK295862|KIAA0528|9847|KIAA0528	0.891291	CTCF.p2:-5:0.891
chr16	78036959	78037092	reg1007205.p1	12.534	+	TSC_hg19_v1_chr16_+_77822482 AK290153 BC033537 NM_020927 AB046796 CU689646	-214536	+	NM_001105663 NM_001243657 NM_001243660 NM_001243661 TSC_hg19_v1_chr16_+_77756410 AK296963 EU981826	-280592	+	AK293831 BC063283 NM_199355	-568055	-	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	19425	+	NM_001244755	25960	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	96430	+	AK290153|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##BC033537|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_020927|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AB046796|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_001105663|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243657|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243660|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243661|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK296963|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##EU981826|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase	0.998857	CTCF.p2:4:0.999
chr6	42134297	42134433	reg1006424.p1	12.534	+	AK313865 NM_000409 BC031663 AK125780	-11202	+	NM_001164446	-23651	-	TSC_hg19_v1_chr6_+_42018268 BC018796 AF465841 CU689710	-116094	+	BX537393 NM_002098	28328	-	CU680358 AK298219 TSC_hg19_v1_chr6_-_42185591 AF113220 AF277180 AK098446	51225	-	TSC_hg19_v1_chr6_-_42185597 AK316599 BC012560	51232	-	AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)##NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)##BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)##AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)##NM_001164446|C6orf132|647024|chromosome 6 open reading frame 132##BC018796|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AF465841|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BX537393|GUCA1B|2979|guanylate cyclase activator 1B (retina)##NM_002098|GUCA1B|2979|guanylate cyclase activator 1B (retina)##AK298219|MRPS10|55173|mitochondrial ribosomal protein S10##AF113220|MRPS10|55173|mitochondrial ribosomal protein S10##AF277180|MRPS10|55173|mitochondrial ribosomal protein S10##AK098446|MRPS10|55173|mitochondrial ribosomal protein S10##AK316599|MRPS10|55173|mitochondrial ribosomal protein S10##BC012560|MRPS10|55173|mitochondrial ribosomal protein S10	0.381513	CTCF.p2:5:0.382
chr12	83079604	83079726	reg1005671.p1	12.533	+	NM_032230 TSC_hg19_v1_chr12_+_82752307 AK310231 AK026442 BC029120 CU688600	-327356	+	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	-327489	-	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	-926556	-	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	1035	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	1252	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	1596	+	NM_032230|C12orf26|84190|chromosome 12 open reading frame 26##AK310231|C12orf26|84190|chromosome 12 open reading frame 26##AK026442|C12orf26|84190|chromosome 12 open reading frame 26##BC029120|C12orf26|84190|chromosome 12 open reading frame 26##BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59##AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2	0.775655	CTCF.p2:-17:0.776
chr8	19229717	19229829	reg1004828.p1	12.533	+	TSC_hg19_v1_chr8_+_19171505 NM_001174160 NM_022071 AK024799 AK293301 BC082982 NM_001174159	-58490	+	TSC_hg19_v1_chr8_-_18871214 AK091317 AX746913 NM_015310	-358487	-	GU727648 TSC_hg19_v1_chr8_-_18871128	-358661	-	BX649103 NM_001130518	230257	-	AY358441 NM_018371	310320	-	AK314625 TSC_hg19_v1_chr8_-_19615422	385644	-	NM_001174160|SH2D4A|63898|SH2 domain containing 4A##NM_022071|SH2D4A|63898|SH2 domain containing 4A##AK024799|SH2D4A|63898|SH2 domain containing 4A##AK293301|SH2D4A|63898|SH2 domain containing 4A##BC082982|SH2D4A|63898|SH2 domain containing 4A##NM_001174159|SH2D4A|63898|SH2 domain containing 4A##AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3##GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX649103|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_001130518|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AY358441|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018371|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AK314625|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1	0.788235	CTCF.p2:-3:0.788
chr2	42423970	42424103	reg1004644.p2	12.531	+	TSC_hg19_v1_chr2_+_42396514 AB275889 NM_001145076 NM_019063 AK314702 BC146799 AF177377 BC067777 BC104647 BC140845 AB374363 AB462412 AB384933	-27461	+	AB528999 TSC_hg19_v1_chr2_+_42275979	-148075	+	TSC_hg19_v1_chr2_+_42275160 NM_138370	-148904	+	AF127788 BT007371 CR542208 CU675543 DQ890566 DQ893729 TSC_hg19_v1_chr2_-_42588354 AB007618 BC005251 BC007095 NM_004718	164297	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	296522	-	TSC_hg19_v1_chr2_-_42721118 AF454547 AF454548 BC071558 AF348982 NM_133329 NM_172344	297167	-	NM_001145076|EML4|27436|echinoderm microtubule associated protein like 4##NM_019063|EML4|27436|echinoderm microtubule associated protein like 4##AK314702|EML4|27436|echinoderm microtubule associated protein like 4##BC146799|EML4|27436|echinoderm microtubule associated protein like 4##AF177377|EML4|27436|echinoderm microtubule associated protein like 4##BC067777|EML4|27436|echinoderm microtubule associated protein like 4##BC104647|EML4|27436|echinoderm microtubule associated protein like 4##BC140845|EML4|27436|echinoderm microtubule associated protein like 4##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)##AF127788|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BT007371|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##CR542208|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ890566|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ893729|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB007618|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC005251|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC007095|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##NM_004718|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF454547|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF454548|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##BC071558|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF348982|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##NM_133329|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##NM_172344|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3	0.627934	CTCF.p2:-24:0.601
chr5	52244453	52244581	reg1005472.p2	12.531	+	AK025729 BC007650 TSC_hg19_v1_chr5_+_52095991 BC005889 BC007249 AF132951 AK312633 AF139828 BC022789	-148531	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	-160528	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	-1565264	+	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	40603	+	BC046097 AF155659 NM_004531	160788	-	TSC_hg19_v1_chr5_-_52405588 BC029287 AF091871 AF117815 AK312887 NM_176806 BC095417	161079	-	AK025729|PELO|53918|pelota homolog (Drosophila)##BC007650|PELO|53918|pelota homolog (Drosophila)##BC005889|PELO|53918|pelota homolog (Drosophila)##BC007249|PELO|53918|pelota homolog (Drosophila)##AF132951|PELO|53918|pelota homolog (Drosophila)##AK312633|PELO|53918|pelota homolog (Drosophila)##AF139828|PELO|53918|pelota homolog (Drosophila)##BC022789|PELO|53918|pelota homolog (Drosophila)##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1##AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC046097|MOCS2|4338|molybdenum cofactor synthesis 2##AF155659|MOCS2|4338|molybdenum cofactor synthesis 2##NM_004531|MOCS2|4338|molybdenum cofactor synthesis 2##BC029287|MOCS2|4338|molybdenum cofactor synthesis 2##AF091871|MOCS2|4338|molybdenum cofactor synthesis 2##AF117815|MOCS2|4338|molybdenum cofactor synthesis 2##AK312887|MOCS2|4338|molybdenum cofactor synthesis 2##NM_176806|MOCS2|4338|molybdenum cofactor synthesis 2##BC095417|MOCS2|4338|molybdenum cofactor synthesis 2	0.0	
chr6	45898279	45898411	reg1006225.p1	12.531	+	TSC_hg19_v1_chr6_+_45390379 L40992	-507933	+	TSC_hg19_v1_chr6_+_45390325 BC108919 BC108920	-508040	+	TSC_hg19_v1_chr6_+_45389825 NM_004348	-508480	+	DQ892643 DQ895881 CU690236 AF176920 AK314416 AK075163 TSC_hg19_v1_chr6_-_45983598 AK075144 AF216941 AK222544 BC035968 DQ679794 AK223130 NM_016929	85132	-	AY032602 AK097048 NM_001114086	149686	-	NM_014936 TSC_hg19_v1_chr6_+_46097726 BC018054	199369	+	L40992|RUNX2|860|runt-related transcription factor 2##BC108919|RUNX2|860|runt-related transcription factor 2##BC108920|RUNX2|860|runt-related transcription factor 2##NM_004348|RUNX2|860|runt-related transcription factor 2##DQ892643|CLIC5|53405|chloride intracellular channel 5##DQ895881|CLIC5|53405|chloride intracellular channel 5##AF176920|CLIC5|53405|chloride intracellular channel 5##AK314416|CLIC5|53405|chloride intracellular channel 5##AK075163|CLIC5|53405|chloride intracellular channel 5##AK075144|CLIC5|53405|chloride intracellular channel 5##AF216941|CLIC5|53405|chloride intracellular channel 5##AK222544|CLIC5|53405|chloride intracellular channel 5##BC035968|CLIC5|53405|chloride intracellular channel 5##DQ679794|CLIC5|53405|chloride intracellular channel 5##AK223130|CLIC5|53405|chloride intracellular channel 5##NM_016929|CLIC5|53405|chloride intracellular channel 5##AY032602|CLIC5|53405|chloride intracellular channel 5##AK097048|CLIC5|53405|chloride intracellular channel 5##NM_001114086|CLIC5|53405|chloride intracellular channel 5##NM_014936|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##BC018054|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)	0.999057	CTCF.p2:9:0.999
chr12	113536240	113536374	reg1005491.p2	12.530	+	NM_004416 BC048216	-40617	+	TSC_hg19_v1_chr12_+_113416323 NM_001032731 NM_002535 NM_016817 BC010625 BC053870 BC023637 AK292906 BC069052 BC049215 AK292796 M87284 M87434 AB590925 CU690608	-119967	+	AF063613 TSC_hg19_v1_chr12_+_113376306	-159967	+	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	37105	-	AF086713 AB208935 AK294350 NM_001193520 NM_004658	37724	-	AK308987 NM_001144872	51297	+	NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)##BC048216|DTX1|1840|deltex homolog 1 (Drosophila)##NM_001032731|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_002535|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_016817|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC010625|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC053870|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC023637|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292906|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC069052|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC049215|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292796|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87284|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87434|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AF063613|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001144872|CCDC42B|387885|coiled-coil domain containing 42B	1.343856	CTCF.p2:11:0.923	CTCF.p2:96:0.421
chr6	25556779	25556889	reg1005777.p1	12.530	+	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	-276940	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	-277176	+	TSC_hg19_v1_chr6_+_25279316 BC040903	-277516	+	TSC_hg19_v1_chr6_-_25571218 Y10205	14424	-	AK289477 NM_006998 BC000336 BC003036 Y16752	95589	+	CU687518 BC062211 NM_170745	169937	-	BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK289477|SCGN|10590|secretagogin, EF-hand calcium binding protein##NM_006998|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC000336|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC003036|SCGN|10590|secretagogin, EF-hand calcium binding protein##Y16752|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC062211|HIST1H2AA|221613|histone cluster 1, H2aa##NM_170745|HIST1H2AA|221613|histone cluster 1, H2aa	0.985093	CTCF.p2:11:0.985
chr1	223886042	223886159	reg1006538.p1	12.529	+	TSC_hg19_v1_chr1_-_223853404 NM_001143962	-32683	-	TSC_hg19_v1_chr1_-_223853364 BC157893	-32730	-	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	-319335	+	AK316211 AK297800 NM_001146068	3173	+	TSC_hg19_v1_chr1_+_223900093 BC007686 BC011828 NM_001748	14017	+	M23254 TSC_hg19_v1_chr1_+_223900223 AK303952 AF261089 AK315179 BC021303	14118	+	NM_001143962|CAPN8|388743|calpain 8##BC157893|CAPN8|388743|calpain 8##NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65##AK316211|CAPN2|824|calpain 2, (m/II) large subunit##AK297800|CAPN2|824|calpain 2, (m/II) large subunit##NM_001146068|CAPN2|824|calpain 2, (m/II) large subunit##BC007686|CAPN2|824|calpain 2, (m/II) large subunit##BC011828|CAPN2|824|calpain 2, (m/II) large subunit##NM_001748|CAPN2|824|calpain 2, (m/II) large subunit##M23254|CAPN2|824|calpain 2, (m/II) large subunit##AK303952|CAPN2|824|calpain 2, (m/II) large subunit##AF261089|CAPN2|824|calpain 2, (m/II) large subunit##AK315179|CAPN2|824|calpain 2, (m/II) large subunit##BC021303|CAPN2|824|calpain 2, (m/II) large subunit	0.379756	CTCF.p2:-21:0.361
chr2	76425106	76425254	reg1007298.p1	12.529	+	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-487129	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-487461	-	TSC_hg19_v1_chr2_+_75873908 NM_014763 AK295578 AK291250 BC030144 CU688824 AB463123 BC021051 D14660 DQ892303 DQ895502	-551242	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	1324238	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	2827658	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	2889953	-	BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_014763|MRPL19|9801|mitochondrial ribosomal protein L19##AK295578|MRPL19|9801|mitochondrial ribosomal protein L19##AK291250|MRPL19|9801|mitochondrial ribosomal protein L19##BC030144|MRPL19|9801|mitochondrial ribosomal protein L19##BC021051|MRPL19|9801|mitochondrial ribosomal protein L19##D14660|MRPL19|9801|mitochondrial ribosomal protein L19##DQ892303|MRPL19|9801|mitochondrial ribosomal protein L19##DQ895502|MRPL19|9801|mitochondrial ribosomal protein L19##BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta	0.94421	CTCF.p2:0:0.944
chr8	87715713	87715842	reg1007454.p1	12.529	+	AK292912 BC007017 BC008385 TSC_hg19_v1_chr8_+_87526694 BC066597 BC036242 AB014536 AF077226	-189066	+	TSC_hg19_v1_chr8_+_87526660 NM_003909	-189124	+	TSC_hg19_v1_chr8_-_87520981 NM_016033	-194781	-	BC150601 AF272900 NM_019098 DQ426865	40135	-	AK093121 AX747937 BC117326 BC117328 NM_173538	162896	+	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	1170482	-	AK292912|CPNE3|8895|copine III##BC007017|CPNE3|8895|copine III##BC008385|CPNE3|8895|copine III##BC066597|CPNE3|8895|copine III##BC036242|CPNE3|8895|copine III##AB014536|CPNE3|8895|copine III##AF077226|CPNE3|8895|copine III##NM_003909|CPNE3|8895|copine III##NM_016033|FAM82B|51115|family with sequence similarity 82, member B##BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3##AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3##NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2	0.881985	CTCF.p2:-9:0.882
chr2	110829682	110829787	reg1005710.p1	12.528	+	BC094740 NM_001205288 NM_033514	-173726	+	NM_005054 U64675	-277769	+	AL136868 NM_001037866 NM_001123363 NM_032260	-279400	+	U17077 AB590150 DQ892870 DQ896118 TSC_hg19_v1_chr2_-_110873397 BC003179	43671	-	TSC_hg19_v1_chr2_-_110873536 AK311353	43831	-	TSC_hg19_v1_chr2_-_110873641 AK056616	43910	-	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U17077|MALL|7851|mal, T-cell differentiation protein-like##DQ892870|MALL|7851|mal, T-cell differentiation protein-like##DQ896118|MALL|7851|mal, T-cell differentiation protein-like##BC003179|MALL|7851|mal, T-cell differentiation protein-like##AK311353|MALL|7851|mal, T-cell differentiation protein-like##AK056616|MALL|7851|mal, T-cell differentiation protein-like	1.150366	CTCF.p2:13:0.818	CTCF.p2:-40:0.332
chr2	16794855	16794987	reg1005423.p1	12.527	+	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-712754	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-712926	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	-713148	-	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	52223	-	DQ860102 NM_001099218	904784	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	926966	+	BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1	0.132365	
chr2	40781975	40782079	reg1005457.p2	12.527	+	Y12878 Y12885 AK291696 BX537482 NM_001112802	-42455	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	-102805	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-124596	-	AK124893 NM_001242815	1398915	-	TSC_hg19_v1_chr2_+_42275160 NM_138370	1493105	+	AB528999 TSC_hg19_v1_chr2_+_42275979	1493934	+	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)	0.273412	CTCF.p2:3:0.273
chr13	42242430	42242556	reg1007866.p1	12.526	+	TSC_hg19_v1_chr13_+_42031690 BC038706 AF036549	-210793	+	TSC_hg19_v1_chr13_+_42031685 BC066334	-210810	+	TSC_hg19_v1_chr13_+_42031539 NM_014059	-210942	+	TSC_hg19_v1_chr13_-_42535066 AK095155	292587	-	TSC_hg19_v1_chr13_-_42535247 AB590583 BC131802 BC053674 NM_001009814 NM_015058	292696	-	AK289546 NM_001204504	371678	+	BC038706|C13orf15|28984|chromosome 13 open reading frame 15##AF036549|C13orf15|28984|chromosome 13 open reading frame 15##BC066334|C13orf15|28984|chromosome 13 open reading frame 15##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15##AK095155|KIAA0564|23078|KIAA0564##BC131802|KIAA0564|23078|KIAA0564##BC053674|KIAA0564|23078|KIAA0564##NM_001009814|KIAA0564|23078|KIAA0564##NM_015058|KIAA0564|23078|KIAA0564##AK289546|DGKH|160851|diacylglycerol kinase, eta##NM_001204504|DGKH|160851|diacylglycerol kinase, eta	0.966985	CTCF.p2:-9:0.967
chr2	232552052	232552164	reg1005601.p1	12.526	+	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	-94491	+	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	-156954	-	BC033054 TSC_hg19_v1_chr2_-_232379076	-173026	-	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	21126	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	21224	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	93817	-	NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta	0.99037	CTCF.p2:-6:0.990
chr14	106466879	106467059	reg1002200.p5	12.525	+	TSC_hg19_v1_chr14_-_106453169 X17117 AK129517 AK130825 BC065733 X59702	-13799	-	U32200 U32268 U32334 U32335 U32336 U32488 U32490 U32599 U32608 U32609 U32947 U32948 U32950 U32963 U33799 U33801 AF028098 AF028106 AF028107 AF028114 AF028118 AY155550 AY155551 DQ454559 AF460797 AF460726 AF460724 AF460827 DQ454629 DQ454614 DQ454962 GQ232822 DQ454705 DQ523871 DQ454580 DQ523917 DQ523919 AY003767 DQ454466 DQ454560 DQ454565 DQ454682 EU099268 GU552685 AY003808 AY003836 DQ454469 DQ454795 DQ454971 DQ454985 DQ454452 DQ454571 DQ454944 DQ454960 DQ523896 EF583670 DQ454558 DQ454677 DQ454859 DQ454868 DQ455000 DQ523852 DQ523901 DQ454442 DQ523848 HQ704012 DQ100720 DQ454840 DQ454949 FJ840328 FJ873931 HM116191 GQ232887 AJ487491 AJ487492 AJ487493 AJ487498 AJ487506 AY003837 JF810257 AF069907 EF091912 EF175411 EF175427 EF583661 EU350413 EU433868 EU433869 EU433881 EU667601 EU667602 FJ694875 GQ232782 GQ232813 GQ232814 GQ232841 GQ232875 GQ232936 GQ232966 GQ232996 JF810256 GQ232768 EF441747 EF583659 AF103205 AF103114 EF566909 U86787 AF484410 HQ392886 JF894284 AM279467 AM279468 AM279469 AM279470 AM279471 AM279552 AM279555 AM279588 AM279641 AF308558 EU099276 GQ232957 AF408722 HM774202 EU099163 HM774025 HM774888 HM775065 JN110525 JN110528 JN111117 L04330 L04332 L04340 FJ385388 FJ385429 GQ504861 HM774080 HM774150 HM774407 HM774529 HM774561 HM774885 HQ704005 HQ704037 S73138 AF103263 AF082193 AJ008249 AY099261 AY206987 AY998750 DQ097896 EU099144 EU099173 EU099285 AF402947 X94432 AM183993 AY393351 EU099152 EU099269 EU099281 AF306372 AJ236544 AJ271548 AY193806 AY376076 AY376077 AY376090 AY393002 AY393003 AY393011 AY393020 AY393107 AY393113 AY393114 AY393116 AY393122 AY393139 AY393140 AY393227 AY393228 AY393241 AY393250 AY393254 AY393257 AY393259 AY393354 AY393357 AY393363 AY393377 AY393497 AY393500 AY393506 AY393509 AY393511 AY393533 AY393613 AY393616 AY393617 AY393633 AY393637 AY393653 AY393671 AY393676 EU099082 EU099119 EU099146 JF894280 HM995126 JN159306 HM995172 HM995197 HM995672 AY941929 DQ100708 DQ100722 DQ523939 DQ523940 DQ524004 DQ524046 DQ524048 DQ524070 DQ524135 HM994894 HM995065 HM995066 HM995070 HM995071 HM995072 HM995073 HM995088 HM995175 HM995192 HM995193 HM995194 HM995195 HM995196 HM995198 HM995281 HM995297 HM995349 HM995351 HM995538 HM995541 HM995542 HM995586 HM995587 HM995589 HM995591 HM995593 HM995610 HM995612 HM995613 HM996403 HM996541 AY971055 DQ926099 AB063667 AB063719 AB063917 AB066970 AB066981 AB067004 AB067009 AB067029 AB067072 AB067119 AB067126 AB067131 AB067253 AB363079 AB363093 AB363142 AB363149 AB363155 AF035019 AF035020 AF209860 AJ239337 AJ308447 AY033279 AY033280 AY376105 AY866614 AY941843 AY941858 AY941885 AY941903 AY941937 AY944702 AY944720 DQ065631 DQ065643 DQ065667 DQ065682 DQ065683 DQ065690 DQ065691 DQ926090 DQ926220 DQ926223 DQ926495 DQ926527 EF178106 EU549725 EU549730 FJ385284 FJ385396 HQ378330 JF894278 JF894282 JF894286 U07988 AB063662 AB063801 AB063829 AB063919 AB066925 AB066926 AB066963 AB067152 AB067166 AB067301 AB067307 AB067308 AB067329 AB067390 AB067393 AB363083 AB363143 AB363151 AB363161 AF006523 AF021941 AF021969 AF022007 AF035786 AF062092 AF062194 AF062195 AF062197 AF115113 AF115129 AF174043 AF174084 AF174094 AF174099 AF174107 AF174114 AF174125 AF174127 AF302820 AF455545 AF455547 AJ239344 AJ239371 AJ308466 AJ389196 AJ414005 AJ414014 AJ617573 AY033238 AY055487 AY345921 AY553642 AY553645 AY577308 AY577310 AY640563 AY866611 AY941911 AY941936 AY941945 AY971057 AY971071 DQ100662 DQ100680 DQ100786 DQ100789 DQ100800 DQ100816 DQ100914 DQ100919 DQ225091 DQ926031 DQ926058 DQ926059 DQ926135 DQ926486 DQ926543 FJ385320 FJ385387 GU570212 GU570215 GU570217 GU570269 HQ689739 JF806453 JF806454 JN158766 JN158852 JN159083 JN159282 JN159291 JN159293 JN159302 JN159305 JN159446 L14456 L23558 S73506 U00499 U00505 U00539 U00554 U00562 U00568 U00586 U71104 U85231 U85241 U86522 Z18846 Z34893 Z92888 AF035803 AY686906 AY686915 AY944693 AY944713 AY944721 DQ535285 DQ535302 DQ535348 DQ535375 DQ535476 EF177970 EF178023 EF178112 EF178115 EF178119 EF178135 HM995869 HM995871 AY957509 AY957510 FJ039793 AF062143 AF062151 AF062178 AF062179 AF062226 AF062256 AF062257 AF062262 AF062267 AF062271 AF067121 AF174005 AF174006 AF174009 AF174016 AF174031 AJ009732 M29468 U43758 U43762 Z14213 Z36889 Z46348 Z47223 Z80852 L23559 M24668 AJ010445 TSC_hg19_v1_chr14_-_106453155 BC080557 M18512	-14044	-	AF064915 AF267793 DQ454464 FN563613 FN563615 FN563617 FN563618 FN563619 FN563620 FN563733 FN563734 AF460793 AY393595 DQ523938 FN563493 FN563497 FN563498 FN563499 FN563500 FN563501 FN563502 FN563503 FN563504 FN563505 FN563506 FN563508 FN563532 FN563533 FN563534 FN563535 FN563536 FN563537 FN563539 FN563541 FN563542 FN563543 FN563544 FN563545 FN563546 FN563547 FN563548 FN563549 FN563550 FN563551 FN563552 FN563553 FN563554 FN563555 FN563556 FN563557 FN563558 FN563559 FN563560 FN563561 FN563562 FN563563 FN563564 FN563565 FN563566 FN563568 FN563569 FN563570 FN563601 FN563604 FN563605 FN563606 FN563607 FN563608 FN563610 FN563638 FN563639 FN563640 FN563641 FN563642 FN563643 FN563644 FN563645 FN563646 FN563647 FN563648 FN563649 FN563650 FN563651 FN563652 FN563653 FN563654 FN563655 FN563656 FN563657 FN563658 FN563659 FN563660 FN563661 FN563674 FN563675 FN563676 FN563677 FN563678 FN563679 FN563680 FN563681 FN563682 FN563683 FN563684 FN563685 FN563686 FN563687 FN563688 FN563689 FN563690 FN563691 FN563692 FN563693 FN563694 FN563695 FN563696 FN563697 FN563698 FN563727 FN563728 FN563729 FN563730 FN563731 FN563732 FN563741 FN563742 FN563743 FN563744 FN563745 FN563746 FN563747 FN563748 FN563749 FN563750 FN563751 FN563752 DQ454919 DQ454917 DQ454897 M71234 DQ454581 DQ454690 DQ454896 DQ454978 DQ454888 DQ454959 DQ454895 AF017457 M71225 M71226 DQ523915 L04771 AJ008198 AJ008199 DQ454824 S75894 EU099248 EF407841 JF810281 L21746 AF459631 S76902 AF343422 AF343424 M99372 L21747 DQ454899 AY393584 AY393323 AY393326 AY393327 AY393332 AY393473 AY393474 AY393476 AY393477 AY393479 AY393484 AY393486 AY393487 AY393488 AY393489 AY393490 AY393492 AY393574 AY393575 AY393576 AY393577 AY393578 AY393579 AY393580 AY393581 AY393582 AY393583 AY393585 AY393586 AY393587 AY393588 AY393589 AY393590 AY393591 AY393592 AY393593 AY393594 EU099263 L21734 X65920 DQ524023 AF103096 AF035040 DQ523994 L21733 L21738 L21729 AF015136 AF015137 AF015139 AF015140 AF015141 AF015144 AF015145 AF015146 JN110879 JN110884 JN110895 JN110931 L04333 L04338 L04341 L04762 L04763 L04768 L04769 L04770 L04772 L21726 L21727 L21730 L21731 L21732 L21735 L21736 L21737 L21739 L21740 L21741 L21742 L21744 L21745 L21748 M71217 M71219 M71223 M71227 M71228 M71229 M71230 M71233 U13195 U13196 U13197 U13198 U13199 U13200 U13201 U13202 FJ385406 AF082200 AF103769 AF361061 AF361062 AF361063 AF361064 AF361065 AF361066 AF361067 AF361068 AF361069 AF361070 AF361071 AF361072 U21271 DQ524163 AF166264 L38894 U21250 U21251 U21263 U21264 U21265 AJ239381 AJ007440 DQ523936 DQ523948 DQ523949 DQ523956 DQ523961 DQ523963 DQ523978 DQ523981 DQ523982 DQ523983 DQ523996 DQ523998 DQ524010 DQ524016 DQ524025 DQ524056 DQ524063 DQ524064 DQ524066 DQ524067 DQ524069 DQ524071 DQ524073 DQ524075 DQ524076 DQ524078 DQ524081 DQ524082 DQ524083 DQ524084 DQ524085 DQ524086 DQ524091 DQ524093 DQ524094 DQ524095 DQ524097 DQ524098 DQ524101 DQ524103 DQ524105 DQ524106 DQ524107 DQ524109 DQ524112 DQ524113 DQ524116 DQ524119 DQ524121 DQ524122 DQ524123 DQ524128 DQ524129 DQ524139 DQ524145 DQ524156 DQ524157 DQ926041 HM996448 AF129749 U00535 AB063677 AB063678 AB063679 AB063680 AB063686 AB063687 AB063697 AB063724 AB063750 AB063809 AB063891 AB063907 AB063912 AB063922 AB066943 AB066951 AB066952 AB067336 AB067338 AB067339 AB067340 AB067341 AB067342 AB067343 AB067344 AB067347 AB067349 AB067351 AB067353 AB067355 AB067357 AB067358 AB067361 AB067363 AB067364 AB067365 AB067366 AB067368 AB067369 AB067370 AB067373 AB067374 AB067376 AF013615 AF021985 AF035039 AF062123 AF062213 AF062284 AF078942 AF110149 AF174044 AJ308465 AM279625 AM279626 AM279627 AY033244 AY033245 AY033248 AY033249 AY033259 AY033260 AY033261 AY033269 AY033277 AY033278 AY270187 AY270188 AY270189 AY685266 AY941880 AY941881 AY941882 AY941890 AY941918 AY941924 AY941925 AY971140 DQ005277 DQ005294 DQ100886 DQ100891 DQ100997 DQ205179 DQ212525 DQ212526 DQ535278 DQ535313 DQ535323 DQ926075 DQ926092 DQ926147 DQ926280 DQ926430 DQ926455 DQ926581 DQ926593 EF178076 FJ385286 FJ490201 HQ378327 S71250 U00548 U00558 X67879 X67880 X67881 X67882 X67883 X67884 X67885 X67886 X67887 X67888 X67889 X67890 X67891 X67892 X67893 X67894 X67895 X67896 X67897 X67898 X67900 Z15110 M18510 Z14210 Z14207 Z14209 AY392985 AY392987 AY392988 AY392989 AY392990 AY392991 AY392992 AY392993 AY392994 AY392995 AY392997 AY392998 AY393098 AY393099 AY393100 AY393101 AY393102 AY393103 AY393104 AY393205 AY393206 AY393207 AY393208 AF062114 AF062137 AF062165 AF062219 AF062254 AF062273 AY452136 AY452137 L21957 X65916 X65917 X65918 Z14158 Z14159 Z14160 Z14161 Z14162 Z14163 Z14164 Z14184 Z14185 Z14186 Z14187 Z14188 Z14208 Z14211 Z14223 Z47236 BC089412 AY510105 M34029 BX648616 TSC_hg19_v1_chr14_-_106406109	-61098	-	GQ232825 GU552779 GU552687 GU552689 AY003848 FJ873924 FJ873955 GQ232946 HM116167 EF407847 EU350414 GQ232973 HM774711 EF407839 EF441752 U86801 AF211930 AM279559 HM774196 EU099286 EU146322 L04328 L04336 L04337 L33037 AY062319 FJ385375 FJ385408 FJ385414 FJ385418 FJ385419 HM774332 HM774418 HM774599 HM774606 AF103282 EU099067 EU099203 EU099287 EU146373 EU146380 FJ385394 EU099221 EU099283 AF306375 AF306376 AM259139 AY062320 AY392849 AY393007 AY393013 AY393111 AY393223 AY393232 AY393255 AY393368 AY393531 AY393610 AY393666 DQ100814 EU099253 HM996275 AY033262 AY033283 EF177964 FJ385299 AB022655 AB067168 AB067394 AF022000 AJ239360 AJ414006 AY553644 AY553647 AY885171 DQ926345 FJ039788 HM152522 M17750 M17751 U00569 U00580 AY686877 AY944696 DQ535282 DQ535443 DQ535465 DQ535484 EF178053 EF178130 FJ195468 FJ195471 HM152519 AF062134 AF062139 AF062140 AF062142 AF062221 L01278 X65883 X65885 X65887 X65888 X65891 X65892 X65893 Z47274 Z47275 Z47276 Z47277 Z80847 BC075840 TSC_hg19_v1_chr14_-_106471733 BX640724 AK097348 AK126543 AK304469 BX640847 S42403	4688	-	U49664 U32269 U32952 AY312398 AY312399 DQ454445 DQ454564 DQ454725 DQ524089 DQ454727 DQ454701 AF460719 AF460723 AF460756 AF460759 AF460771 AF460834 AF460823 AF460829 AF069906 DQ454534 DQ454674 DQ454797 DQ454818 GQ232799 DQ454530 DQ454764 Z30560 DQ454570 DQ454557 DQ454637 GU552723 GQ232831 Z30574 DQ454608 DQ454707 DQ454862 DQ454866 DQ454867 DQ454932 DQ523879 GQ232818 Z30544 Z30556 Z30563 Z30597 Z30672 DQ454537 DQ454600 Z30594 DQ454991 Z30548 DQ454533 DQ454966 DQ523863 DQ454575 DQ454591 DQ454675 DQ454975 DQ454989 HM116173 AY003860 DQ454688 EF091927 JF810280 EU099245 AY393163 EU099075 EU099102 AY393165 EU099215 AM183979 AY393166 AY393171 AY393177 AY393179 AY393180 AY393181 AY393183 AY393184 S74500 EU620003 AF103363 AF400158 AJ240597 JN110684 S74642 Z46847 FJ385345 FJ385356 FJ385426 GQ504882 AY062307 AF103159 AB274406 AB274412 AY422526 HM995333 L38895 Z92893 AY671484 AY671502 HM996309 DQ524158 DQ524152 AF398957 DQ523937 DQ523942 DQ523974 DQ523976 DQ524014 DQ524020 DQ524029 DQ524039 DQ524045 DQ524146 HM996397 AM233760 AM233767 AM233773 DQ926107 AF453266 AY376082 EF177971 HM995388 HM995482 HM995628 HM995630 HM995662 HM995740 HM995924 HM996182 HM996322 HM996354 HM996496 HM996514 HM996515 AB066901 AB066907 AB067286 AB067291 AB084084 AB453233 AF174055 AF174064 AF174066 AF174090 AF174108 AF174113 AF262203 AF262207 AJ244952 AJ244989 AJ245004 AJ245022 AJ245025 AJ245048 AJ245053 AJ245233 AJ245239 AJ245242 AJ389195 AJ556756 AJ556762 AJ576037 AJ579119 AJ579123 AJ579127 AJ579128 AJ579137 AJ579254 AJ579295 AJ579298 AJ579299 AY640493 AY640507 AY640551 AY670735 AY670737 AY670748 AY670776 AY670778 AY670786 AY670793 AY670807 AY670829 AY670832 AY670848 AY670852 AY670854 AY670861 AY670868 AY670869 AY670876 AY670877 AY670880 AY670887 AY670888 AY670889 AY670891 AY670901 AY670906 AY670908 AY670909 AY670917 AY670922 AY670927 AY670934 AY670936 AY670937 AY670938 AY670939 AY670941 AY670945 AY670955 AY670956 AY670957 AY670964 AY670968 AY670971 AY670979 AY670996 AY671042 AY671084 AY671098 AY671112 AY671127 AY671131 AY671137 AY671138 AY671237 AY671320 AY671325 AY671331 AY671336 AY671344 AY671367 AY671381 AY671385 AY671396 AY671397 AY671404 AY671405 AY671407 AY671408 AY671417 AY671437 AY671440 AY671442 AY671448 AY671463 AY671465 AY671467 AY671469 AY671493 AY671501 AY671506 AY671509 AY671516 AY671522 AY671524 AY671526 AY671542 AY671546 AY671547 AY671550 AY671554 AY671558 AY671559 AY671569 AY671571 AY671584 AY671588 AY671590 AY671594 AY671604 AY671607 AY671608 AY671609 AY671610 AY671611 AY671613 AY671615 AY671616 AY671621 AY671622 AY671628 AY671633 AY671636 AY671643 AY671646 AY671647 AY671649 AY671655 AY671657 AY671662 AY671667 AY671669 AY671679 AY671680 AY671683 AY671687 AY671695 AY671747 AY671768 AY671777 AY671778 AY685295 AY685305 AY685312 AY781854 AY781863 AY971061 AY971111 AY971119 DQ005266 DQ005272 DQ005280 DQ100845 DQ100896 DQ205163 DQ926078 FJ039782 FJ385308 FJ385314 FJ385395 GU570393 GU570394 HM152486 L12191 L12196 L25294 S55101 S67077 U85239 Z18320 Z70635 Z70659 AY686879 DQ535276 DQ535307 DQ535328 EF177962 FJ195498 FJ195512 HM996178 X67910 AY392946 AY392947 AY392948 AY392956 AY671265 AY671019 AY671039 AY671041 AY671259 AY671249 AY671147 AY671154 AY671178 AY671210 AY671260 AY671261 AF013620 AF062200 AF062203 AF062207 AF062220 AF062245 AF062258 AF062264 AF062272 AF174013 AF174036 AF381602 AF381610 AM233776 AM233818 AY670746 AY671066 AY671181 AY671188 AY671211 AY671693 AY671738 M26997 M99609 X52110 Z11958 Z47221 Z75400 Z75402 BC073766 J00231 BC063384 BC011857 CU680082 CU687682 Z14196 Z14194 TSC_hg19_v1_chr14_-_106478575 Z14182	11384	-	AF267814 AF267818 AY393025 M34025 DQ454568 FJ874017 FJ840306 FJ840308 FJ840341 FJ840342 FJ840347 FJ840348 FJ840351 FJ840353 FJ840354 FJ840356 FJ840361 FJ840364 FJ840365 FJ840368 FJ840373 FJ840378 FJ840401 FJ840402 FJ840404 FJ873822 FJ873825 FJ873827 FJ873829 FJ873831 FJ873832 FJ873834 FJ873841 FJ873843 FJ873845 FJ873851 FJ873852 FJ873854 FJ873856 FJ873879 FJ873880 FJ873882 FJ873889 FJ873891 FJ873893 FJ873896 FJ873900 FJ873905 FJ873906 FJ873907 FJ873908 FJ873917 FJ873919 FJ873920 FJ873927 FJ873937 FJ873944 FJ873960 FJ873973 FJ873980 FJ873983 FJ874001 FJ874004 FJ874006 FJ874007 FJ874011 FJ874012 FJ874016 FJ874021 FJ874022 FJ874032 FJ874033 FJ874035 FJ874041 FJ874060 FJ874071 FJ874092 HM116099 HM116103 HM116104 HM116108 HM116110 HM116111 HM116112 HM116124 HM116125 HM116126 HM116127 HM116132 HM116134 HM116142 HM116150 HM116151 HM116156 HM116157 HM116164 HM116171 HM116176 HM116183 HM116185 HM116186 HM116188 HM116194 HM116200 HM116203 HM116204 HM116207 HM116210 HM116211 HM116212 HM116215 HM116218 HM116224 GU552693 GQ232960 GQ232962 GQ232978 AJ008188 S75886 AJ487496 AY003819 AY994082 EU090242 EU667603 JF810259 AY393312 AY392883 AY392887 AY392891 AY392897 AY392900 AY392903 AY393023 AY393026 AY393027 AY393028 AY393029 AY393030 AY393031 AY393032 AY393033 AY393034 AY393035 AY393036 AY393037 AY393038 AY393040 AY393041 AY393042 AY393043 AY393044 AY393045 AY393046 AY393048 AY393049 AY393050 AY393051 AY393276 AY393277 AY393278 AY393283 AY393285 AY393288 AY393289 AY393290 AY393292 AY393294 AY393298 AY393299 AY393303 AY393304 AY393307 AY393310 AY393311 AY393382 AY393386 AY393390 AY393391 AY393392 AY393393 AY393406 AY393413 AY393416 AY393417 AY393418 AY393419 AY393421 AY393423 AY393435 AY393440 AY393452 AY393554 AY393555 AY393557 AY393558 AY393559 AY393564 AY393565 EU099064 EU099181 EU099246 DQ100785 JN110964 AY955064 JN110468 JN110515 JN110517 JN110539 JN110572 JN110594 JN110907 JN110984 JN110994 JN111158 JN111166 JN111205 AY062324 AM279571 AY866601 AY866658 AM279525 AM279573 AY866680 DQ100676 DQ100927 DQ100946 AM279595 AM279596 AM279599 AM279600 DQ100868 DQ926119 DQ926440 DQ926554 DQ926566 HM995527 HM995209 HM995210 HM995212 HM995214 HM995215 HM995376 HM995377 HM995380 HM995398 HM995401 HM995473 HM995528 HM995531 HM995597 HM995599 HM995814 HM995819 AB063834 AB066852 AB066861 AB066862 AB066864 AB066865 AB066866 AB066868 AB066869 AB066870 AB066871 AB066873 AB066874 AB066878 AB067185 AB067189 AB067221 AB067222 AB067223 AB067226 AB067228 AB067229 AB067231 AB067232 AB363096 AB363107 AB374193 AB374196 AB374197 AB374204 AF035018 AF062155 AF062255 AF129754 AF174046 AF174061 AF174070 AF174071 AF455551 AF460966 AY055482 AY345923 AY866550 AY866584 AY866603 AY866625 AY866961 AY941941 DQ205143 DQ490734 DQ490735 DQ490736 DQ923046 DQ926138 DQ926180 DQ926226 DQ926362 DQ926376 DQ926412 DQ926456 DQ926482 DQ926490 DQ926499 DQ926558 DQ926576 DQ926582 DQ926586 DQ926588 DQ926592 DQ926605 DQ926606 DQ926610 DQ926650 FR820874 GU570276 GU570278 GU570279 GU570280 HM152514 HQ378331 HQ378364 HQ378373 S73953 U00545 U00552 U00555 X64147 M90808 AY393141 AY393143 AY393144 AY393146 AY393147 AY393149 AY393150 X69861 AF062130 AF062268 AF062282 AY172958 S67984 X81695 Z47235 Z47237 Z47243 AK301335 TSC_hg19_v1_chr14_-_106494595 AK057617 BC092449	27413	-	AK129517|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC080557|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089412|IGHM|3507|immunoglobulin heavy constant mu##BC075840|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640724|IGHM|3507|immunoglobulin heavy constant mu##AK097348|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK126543|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640847|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073766|IGHV4-31|28396|immunoglobulin heavy variable 4-31##J00231|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC063384|IGHD|3495|immunoglobulin heavy constant delta##BC011857|IGHM|3507|immunoglobulin heavy constant mu##AK301335|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC092449|IGHA1|3493|immunoglobulin heavy constant alpha 1	4.776551	CTCF.p2:2:0.487	CTCF.p2:-16:0.502	CTCF.p2:22:0.992	CTCF.p2:-36:0.902	CTCF.p2:80:0.911	CTCF.p2:-97:0.983
chr15	21995967	21996083	reg1005873.p3	12.525	+	NM_207355 BC066981	-924047	-	NM_001145004	-1248912	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-1284588	-	NM_207355 BC066981	87113	-	BC136985 NM_001004719	372452	+	BC136597 BC136598 NM_001005241 DQ786223	386420	+	NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4	0.609846	CTCF.p2:16:0.610
chr10	3020414	3020544	reg1006921.p1	12.523	+	AF034837 NM_018702	-1240810	-	TSC_hg19_v1_chr10_+_1102822 AK292591	-1917653	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-1917710	+	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	89268	+	AK092597 AX747622 NM_001242339	90339	+	BC021698 TSC_hg19_v1_chr10_+_3151628	131133	+	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet##BC021698|PFKP|5214|phosphofructokinase, platelet	0.846449	CTCF.p2:11:0.846
chr12	108957457	108957564	reg1005112.p1	12.523	+	NM_014301 NM_213595 TSC_hg19_v1_chr12_+_108956366 AK022758 AK297862 AY009127 AY009128 EU329002 BC011906 AK293202 AM393134 BC061903 AK000574 AB528752 CU687510 DQ896294 EU176420	-1165	+	NM_014706 BC015627 BC041638	-2341	-	TSC_hg19_v1_chr12_-_108954952 AK290209	-2546	-	AK075501 BC096825 AK301202 TSC_hg19_v1_chr12_-_108991824	34293	-	AK295288 TSC_hg19_v1_chr12_-_108991834	34323	-	TSC_hg19_v1_chr12_-_108991861 AK097290	34342	-	NM_014301|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##NM_213595|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##AK022758|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##AK297862|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##AY009127|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##AY009128|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##EU329002|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##BC011906|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##AK293202|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##BC061903|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##AK000574|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##DQ896294|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##EU176420|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##NM_014706|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC015627|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC041638|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK290209|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK075501|TMEM119|338773|transmembrane protein 119##BC096825|TMEM119|338773|transmembrane protein 119##AK301202|TMEM119|338773|transmembrane protein 119##AK295288|TMEM119|338773|transmembrane protein 119##AK097290|TMEM119|338773|transmembrane protein 119	0.013141	
chr4	2221872	2221998	reg1007595.p1	12.523	+	NM_178557	-160697	+	NM_001168243 TSC_hg19_v1_chr4_+_2043732 BC062790 BC038466 BC047038 NM_001141936	-178177	+	NM_005663	-210974	-	AB527447 AY136549 NM_181808	9022	-	AK056134 AK293948 AK303673 TSC_hg19_v1_chr4_-_2243849 CR749640 NM_024511 BC003648	21933	-	AB463859 BT019969 BT019970 AF040963 AF082740 NM_006454 TSC_hg19_v1_chr4_-_2263788 BC068060	41817	-	NM_178557|NAT8L|339983|N-acetyltransferase 8-like (GCN5-related, putative)##NM_001168243|C4orf48|401115|chromosome 4 open reading frame 48##BC062790|C4orf48|401115|chromosome 4 open reading frame 48##BC038466|C4orf48|401115|chromosome 4 open reading frame 48##BC047038|C4orf48|401115|chromosome 4 open reading frame 48##NM_001141936|C4orf48|401115|chromosome 4 open reading frame 48##NM_005663|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AY136549|POLN|353497|polymerase (DNA directed) nu##NM_181808|POLN|353497|polymerase (DNA directed) nu##AK056134|HAUS3|79441|HAUS augmin-like complex, subunit 3##AK293948|HAUS3|79441|HAUS augmin-like complex, subunit 3##AK303673|POLN|353497|polymerase (DNA directed) nu##CR749640|HAUS3|79441|HAUS augmin-like complex, subunit 3##NM_024511|HAUS3|79441|HAUS augmin-like complex, subunit 3##BC003648|HAUS3|79441|HAUS augmin-like complex, subunit 3##BT019969|MXD4|10608|MAX dimerization protein 4##BT019970|MXD4|10608|MAX dimerization protein 4##AF040963|MXD4|10608|MAX dimerization protein 4##AF082740|MXD4|10608|MAX dimerization protein 4##NM_006454|MXD4|10608|MAX dimerization protein 4##BC068060|MXD4|10608|MAX dimerization protein 4	0.924248	CTCF.p2:-7:0.924
chrX	128771611	128771741	reg1006972.p1	12.523	+	TSC_hg19_v1_chrX_+_128674247 AK226116 BC094726 NM_000276 NM_001587 U57627 AK293107 BC130612 BC144106 BC025253 AB384825	-97378	+	TSC_hg19_v1_chrX_-_128657468 NM_003069 NM_139035	-114214	-	EU636009 TSC_hg19_v1_chrX_-_128657443	-114232	-	BC021104 NM_017413	17246	-	AK300954 U90724 NM_003399 BC126174 BC143901	101300	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	142211	+	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe##U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe##AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_003069|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_139035|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##EU636009|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC021104|APLN|8862|apelin##NM_017413|APLN|8862|apelin##AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3	0.999561	CTCF.p2:-5:1.000
chr4	76498735	76498859	reg1002489.p1	12.522	+	AK074237 AK172776 BC117342 BC144003 BC144005 NM_001206981 NM_178497 AK300227 BC061701 HQ258050	-17524	+	NM_144721 TSC_hg19_v1_chr4_+_76439670 AK310575 AK056959 AK303658 AK308914 AK309187 AL833350 BX647579 AK313765	-59106	+	TSC_hg19_v1_chr4_-_76439614 AK091501 AX747022 BC031057 BC047393 NM_001008925 NM_001009922 NM_015436	-59183	-	U35146 BC017417 AK294866 AK312490 NM_003948	56848	-	TSC_hg19_v1_chr4_-_76598333 AB014560 AK291786 NM_012297	99519	-	AF053535 AF145284 TSC_hg19_v1_chr4_-_76598560	99763	-	AK074237|C4orf26|152816|chromosome 4 open reading frame 26##AK172776|C4orf26|152816|chromosome 4 open reading frame 26##BC117342|C4orf26|152816|chromosome 4 open reading frame 26##BC144003|C4orf26|152816|chromosome 4 open reading frame 26##BC144005|C4orf26|152816|chromosome 4 open reading frame 26##NM_001206981|C4orf26|152816|chromosome 4 open reading frame 26##NM_178497|C4orf26|152816|chromosome 4 open reading frame 26##AK300227|C4orf26|152816|chromosome 4 open reading frame 26##BC061701|C4orf26|152816|chromosome 4 open reading frame 26##HQ258050|C4orf26|152816|chromosome 4 open reading frame 26##NM_144721|THAP6|152815|THAP domain containing 6##AK310575|THAP6|152815|THAP domain containing 6##AK056959|THAP6|152815|THAP domain containing 6##AK303658|THAP6|152815|THAP domain containing 6##AK308914|THAP6|152815|THAP domain containing 6##AK309187|THAP6|152815|THAP domain containing 6##AL833350|THAP6|152815|THAP domain containing 6##BX647579|THAP6|152815|THAP domain containing 6##AK313765|THAP6|152815|THAP domain containing 6##AK091501|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC031057|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC047393|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001008925|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001009922|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_015436|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##U35146|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##BC017417|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##AK294866|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##AK312490|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##NM_003948|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	1.045211	CTCF.p2:-10:0.998
chr11	111154134	111154261	reg1004386.p1	12.521	+	BC039669 NM_198498	-27491	+	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	-570912	-	TSC_hg19_v1_chr11_-_110582887 AB037812	-571272	-	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	15836	+	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	95755	-	NM_006235	95959	-	BC039669|C11orf53|341032|chromosome 11 open reading frame 53##NM_198498|C11orf53|341032|chromosome 11 open reading frame 53##AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20##AB037812|ARHGAP20|57569|Rho GTPase activating protein 20##AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##NM_006235|POU2AF1|5450|POU class 2 associating factor 1	0.999145	CTCF.p2:-35:0.999
chr2	87568816	87568918	reg1006232.p1	12.521	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	-265535	-	BC107767 BC109248 BC070296 BC005379 NM_001032392 M93143 NM_002665 BC022294	-319909	-	CR749330 NM_001024457	-424130	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	186150	+	TSC_hg19_v1_chr2_+_87755060 AK312010	186193	+	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	478752	+	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC107767|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC022294|PLGLB2|5342|plasminogen-like B2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1	0.933043	CTCF.p2:8:0.933
chr9	116169333	116169429	reg1005055.p1	12.521	+	TSC_hg19_v1_chr9_-_116163586 AK131490 NM_000031	-5773	-	TSC_hg19_v1_chr9_-_116163563 AK290490 AK312552	-5821	-	TSC_hg19_v1_chr9_-_116163541 BC000977	-5843	-	AB527738 AF226077 AY720898 AK092840 TSC_hg19_v1_chr9_-_116172627	3220	-	TSC_hg19_v1_chr9_-_116172655 BC003166 BC004170 AK074782 AK096050	3264	-	TSC_hg19_v1_chr9_-_116172658 AK074629	3286	-	AK131490|ALAD|210|aminolevulinate dehydratase##NM_000031|ALAD|210|aminolevulinate dehydratase##AK290490|ALAD|210|aminolevulinate dehydratase##AK312552|ALAD|210|aminolevulinate dehydratase##BC000977|ALAD|210|aminolevulinate dehydratase##AF226077|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##AY720898|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##AK092840|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##BC003166|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##BC004170|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##AK074782|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##AK096050|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##AK074629|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)	0.61141	CTCF.p2:-7:0.611
chr17	36819462	36819597	reg1007758.p1	12.520	+	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	-57333	-	BC029278 TSC_hg19_v1_chr17_-_36760969	-58591	-	TSC_hg19_v1_chr17_-_36729122 AK295027	-90407	-	TSC_hg19_v1_chr17_-_36831211 NM_001130677	11656	-	TSC_hg19_v1_chr17_+_36861421 BC064612	42070	+	TSC_hg19_v1_chr17_+_36861879 AK310435 AK310437 NM_005937 AB384930 CU687922 U07932 AB209633	42361	+	AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96##BC064612|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	0.028757	
chr6	159429756	159429882	reg1005332.p2	12.520	+	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-8598	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	-9000	-	TSC_hg19_v1_chr6_-_159420766 BC035675	-9050	-	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	36282	-	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	160611	+	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	684431	-	BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC035675|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial	0.988414	CTCF.p2:-17:0.988
chr14	81919646	81919769	reg1006920.p1	12.519	+	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-54881	-	D14886 NM_201595	-232133	-	D14887 TSC_hg19_v1_chr14_-_81687285 NM_015859 BC050703	-232427	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	80441	-	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	80520	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	4076766	+	HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##D14886|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_201595|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.0	
chr3	8153031	8153149	reg1005279.p1	12.519	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	-1250192	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	-1250291	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-2923599	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	390240	-	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	390425	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	390491	+	X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1	0.378207	CTCF.p2:-11:0.378
chr5	145806845	145806967	reg1004871.p1	12.519	+	BC104923 BC112207 NM_002700 AB464668 EU446649 HQ258176	-88276	+	TSC_hg19_v1_chr5_+_145583167 BC009537 BX647384 NM_018989 BC029648	-223740	+	AK128738 TSC_hg19_v1_chr5_+_145583122	-223789	+	TSC_hg19_v1_chr5_+_145826895 NM_001040006 NM_006706 AK304319 BC006109 BC014151 BC062351 AK126455 BC111727 AB209910 AB464301 AF017789	19988	+	AB463658 AY351676 NM_194251 AK122627	88807	-	CU689232 DQ891785 DQ894969 TSC_hg19_v1_chr5_-_146257712	450768	-	BC104923|POU4F3|5459|POU class 4 homeobox 3##BC112207|POU4F3|5459|POU class 4 homeobox 3##NM_002700|POU4F3|5459|POU class 4 homeobox 3##EU446649|POU4F3|5459|POU class 4 homeobox 3##HQ258176|POU4F3|5459|POU class 4 homeobox 3##BC009537|RBM27|54439|RNA binding motif protein 27##BX647384|RBM27|54439|RNA binding motif protein 27##NM_018989|RBM27|54439|RNA binding motif protein 27##BC029648|RBM27|54439|RNA binding motif protein 27##AK128738|RBM27|54439|RNA binding motif protein 27##NM_001040006|TCERG1|10915|transcription elongation regulator 1##NM_006706|TCERG1|10915|transcription elongation regulator 1##AK304319|TCERG1|10915|transcription elongation regulator 1##BC006109|TCERG1|10915|transcription elongation regulator 1##BC014151|TCERG1|10915|transcription elongation regulator 1##BC062351|TCERG1|10915|transcription elongation regulator 1##AK126455|TCERG1|10915|transcription elongation regulator 1##BC111727|TCERG1|10915|transcription elongation regulator 1##AB209910|TCERG1|10915|transcription elongation regulator 1##AF017789|TCERG1|10915|transcription elongation regulator 1##AY351676|GPR151|134391|G protein-coupled receptor 151##NM_194251|GPR151|134391|G protein-coupled receptor 151##DQ891785|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##DQ894969|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	0.987682	CTCF.p2:7:0.988
chr2	112505371	112505500	reg1007605.p1	12.518	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-626948	+	AK300513 NM_001142807 BC022268	-1015256	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-1069613	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	136191	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	136326	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	150750	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.979184	CTCF.p2:0:0.979
chr6	72219940	72220054	reg1006011.p2	12.518	+	AK023251 TSC_hg19_v1_chr6_-_72130545	-89497	-	TSC_hg19_v1_chr6_+_71998514 BC110999	-221473	+	TSC_hg19_v1_chr6_+_71998513 BC018688	-221487	+	AB045726 AB051866 TSC_hg19_v1_chr6_+_72596447	376431	+	BC151853 AB002338 BC152435 NM_014989 TSC_hg19_v1_chr6_+_72596658	376656	+	TSC_hg19_v1_chr6_+_72596702 AY190519	376715	+	AK023251|LINC00472|79940|long intergenic non-protein coding RNA 472##BC110999|OGFRL1|79627|opioid growth factor receptor-like 1##BC018688|OGFRL1|79627|opioid growth factor receptor-like 1##AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC151853|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB002338|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC152435|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_014989|RIMS1|22999|regulating synaptic membrane exocytosis 1##AY190519|RIMS1|22999|regulating synaptic membrane exocytosis 1	0.026916	
chr11	58443136	58443276	reg1007197.p1	12.517	+	BC069167 NM_000614 BC068030 AK314118 BC074963 BC074964 CU686605 S72921	-53021	+	TSC_hg19_v1_chr11_+_58346697 AB056107 AB057443 CU690828	-96511	+	TSC_hg19_v1_chr11_+_58346591 BC051743 NM_001197051 NM_053023	-96623	+	AF023466 BC009785 NM_005838 NM_201648	56201	-	BC021682 NM_145016 BC016789	168782	-	NM_001220494 AK300479 BC008353	251931	+	BC069167|CNTF|1270|ciliary neurotrophic factor##NM_000614|CNTF|1270|ciliary neurotrophic factor##BC068030|CNTF|1270|ciliary neurotrophic factor##AK314118|CNTF|1270|ciliary neurotrophic factor##BC074963|CNTF|1270|ciliary neurotrophic factor##BC074964|CNTF|1270|ciliary neurotrophic factor##S72921|CNTF|1270|ciliary neurotrophic factor##AB056107|ZFP91|80829|zinc finger protein 91 homolog (mouse)##AB057443|ZFP91-CNTF|386607|ZFP91-CNTF readthrough##BC051743|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_001197051|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_053023|ZFP91|80829|zinc finger protein 91 homolog (mouse)##AF023466|GLYAT|10249|glycine-N-acyltransferase##BC009785|GLYAT|10249|glycine-N-acyltransferase##NM_005838|GLYAT|10249|glycine-N-acyltransferase##NM_201648|GLYAT|10249|glycine-N-acyltransferase##BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1	0.9998	CTCF.p2:10:1.000
chr14	71439214	71439337	reg1006460.p1	12.517	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-64824	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-65142	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-163466	-	AF090989 AF090990 NM_015556	556766	+	AK294895 NM_001204423	959541	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	959878	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.999849	CTCF.p2:7:1.000
chr1	248406562	248406662	reg1005238.p1	12.516	+	AB463960 NM_017504	-4382	+	BC136970 BC136971 NM_001004689	-40262	+	NM_001004688	-63325	+	NM_001004695 BC136994 BC136995	30514	-	NM_001004692	52267	-	NM_001004691 BC136944 BC136946	81271	-	NM_017504|OR2M4|26245|olfactory receptor, family 2, subfamily M, member 4##BC136970|OR2M3|127062|olfactory receptor, family 2, subfamily M, member 3##BC136971|OR2M3|127062|olfactory receptor, family 2, subfamily M, member 3##NM_001004689|OR2M3|127062|olfactory receptor, family 2, subfamily M, member 3##NM_001004688|OR2M2|391194|olfactory receptor, family 2, subfamily M, member 2##NM_001004695|OR2T33|391195|olfactory receptor, family 2, subfamily T, member 33##BC136994|OR2T33|391195|olfactory receptor, family 2, subfamily T, member 33##BC136995|OR2T33|391195|olfactory receptor, family 2, subfamily T, member 33##NM_001004692|OR2T12|127064|olfactory receptor, family 2, subfamily T, member 12##NM_001004691|OR2M7|391196|olfactory receptor, family 2, subfamily M, member 7##BC136944|OR2M7|391196|olfactory receptor, family 2, subfamily M, member 7##BC136946|OR2M7|391196|olfactory receptor, family 2, subfamily M, member 7	0.848722	CTCF.p2:-6:0.849
chr1	33177908	33178046	reg1005067.p1	12.516	+	AK297958 TSC_hg19_v1_chr1_-_33168379 NM_001161708 NM_030786	-9610	-	AB590598 AK302275 TSC_hg19_v1_chr1_-_33168346	-9671	-	NM_001135255 NM_005610 TSC_hg19_v1_chr1_+_33116808 AK312571 AK299410 BC003092 X74262 X71810 BC053904 AK222779 BC075836 AB527301 DQ892499 DQ895712 CU678370 BT007309 AK299251 NM_001135256	-61124	+	TSC_hg19_v1_chr1_+_33207423 NM_020888	29590	+	TSC_hg19_v1_chr1_+_33219620 AB384615	41638	+	TSC_hg19_v1_chr1_+_33231234 AK298965 NM_001198972 NM_001198973	53254	+	AK297958|SYNC|81493|syncoilin, intermediate filament protein##NM_001161708|SYNC|81493|syncoilin, intermediate filament protein##NM_030786|SYNC|81493|syncoilin, intermediate filament protein##AK302275|SYNC|81493|syncoilin, intermediate filament protein##NM_001135255|RBBP4|5928|retinoblastoma binding protein 4##NM_005610|RBBP4|5928|retinoblastoma binding protein 4##AK312571|RBBP4|5928|retinoblastoma binding protein 4##AK299410|RBBP4|5928|retinoblastoma binding protein 4##BC003092|RBBP4|5928|retinoblastoma binding protein 4##X74262|RBBP4|5928|retinoblastoma binding protein 4##X71810|RBBP4|5928|retinoblastoma binding protein 4##BC053904|RBBP4|5928|retinoblastoma binding protein 4##AK222779|RBBP4|5928|retinoblastoma binding protein 4##BC075836|RBBP4|5928|retinoblastoma binding protein 4##DQ892499|RBBP4|5928|retinoblastoma binding protein 4##DQ895712|RBBP4|5928|retinoblastoma binding protein 4##BT007309|RBBP4|5928|retinoblastoma binding protein 4##AK299251|RBBP4|5928|retinoblastoma binding protein 4##NM_001135256|RBBP4|5928|retinoblastoma binding protein 4##NM_020888|KIAA1522|57648|KIAA1522##AK298965|KIAA1522|57648|KIAA1522##NM_001198972|KIAA1522|57648|KIAA1522##NM_001198973|KIAA1522|57648|KIAA1522	0.997896	CTCF.p2:-37:0.998
chr3	170132037	170132148	reg1004943.p1	12.516	+	NM_001145097 NM_001248008 U70730 X15217 X15219	-54682	+	AK300053 TSC_hg19_v1_chr3_+_170075522 BC053554	-56536	+	TSC_hg19_v1_chr3_+_170075508 BC059386	-56586	+	NM_005602 TSC_hg19_v1_chr3_+_170136652 AK294108 AK312923 BC013577	4566	+	AK098766 NM_001185056 AK294087	6949	+	TSC_hg19_v1_chr3_-_170303774 AK122655 NM_020949	171726	-	NM_001145097|SKIL|6498|SKI-like oncogene##NM_001248008|SKIL|6498|SKI-like oncogene##U70730|SKIL|6498|SKI-like oncogene##X15217|SKIL|6498|SKI-like oncogene##X15219|SKIL|6498|SKI-like oncogene##AK300053|SKIL|6498|SKI-like oncogene##BC059386|SKIL|6498|SKI-like oncogene##NM_005602|CLDN11|5010|claudin 11##AK312923|CLDN11|5010|claudin 11##BC013577|CLDN11|5010|claudin 11##NM_001185056|CLDN11|5010|claudin 11##AK294087|CLDN11|5010|claudin 11##AK122655|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_020949|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14	0.064139	
chr11	119227508	119227653	reg1000169.p2	12.513	+	AJ862823 BC036675 AB055505 AK295203 AK055132 NM_015645 NM_031433	-10207	-	TSC_hg19_v1_chr11_-_119211575 AF329841 AY358383 BC029485	-15998	-	AL110261 AB590791 TSC_hg19_v1_chr11_-_119211170	-16478	-	AF079564 AK301805 AK292255 TSC_hg19_v1_chr11_-_119234855	7162	-	TSC_hg19_v1_chr11_-_119234904 AK309582 AF440755 NM_171997	7302	-	TSC_hg19_v1_chr11_-_119252321 BC002854 BC002955	24731	-	AJ862823|MFRP|83552|membrane frizzled-related protein##BC036675|MFRP|83552|membrane frizzled-related protein##AB055505|MFRP|83552|membrane frizzled-related protein##AK295203|MFRP|83552|membrane frizzled-related protein##AK055132|MFRP|83552|membrane frizzled-related protein##NM_015645|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##NM_031433|MFRP|83552|membrane frizzled-related protein##AF329841|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##AY358383|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##BC029485|MFRP|83552|membrane frizzled-related protein##AL110261|MFRP|83552|membrane frizzled-related protein##AF079564|USP2|9099|ubiquitin specific peptidase 2##AK301805|USP2|9099|ubiquitin specific peptidase 2##AK292255|USP2|9099|ubiquitin specific peptidase 2##AF440755|USP2|9099|ubiquitin specific peptidase 2##NM_171997|USP2|9099|ubiquitin specific peptidase 2##BC002854|USP2|9099|ubiquitin specific peptidase 2##BC002955|USP2|9099|ubiquitin specific peptidase 2	0.039189	
chr14	103161019	103161148	reg1005024.p1	12.513	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-101922	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	-102085	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-184969	-	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	82736	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	82817	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	227915	+	AF155595|RCOR1|23186|REST corepressor 1##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)	0.997669	CTCF.p2:-10:0.998
chr3	115538754	115538882	reg1007093.p1	12.513	+	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-196399	+	NM_001130064 NM_002045	-196668	+	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	-672704	-	AK315286 TSC_hg19_v1_chr3_-_116164338	625513	-	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	625555	-	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	3214715	-	AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43##BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315286|LSAMP|4045|limbic system-associated membrane protein##BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11	1.98011	CTCF.p2:24:0.984	CTCF.p2:-35:0.996
chr3	50580007	50580115	reg1005604.p2	12.513	+	AJ251367 AJ251368 AB011130 BC152438 AB383908 NM_001005505 NM_001174051 NM_006030 AF040709 AF042792 AK310138 TSC_hg19_v1_chr3_-_50541066	-39101	-	TSC_hg19_v1_chr3_-_50396943 NM_007024 AK314166	-183123	-	BC017367 TSC_hg19_v1_chr3_-_50396920 BC011948	-183151	-	AK124438 AK311093 TSC_hg19_v1_chr3_-_50605192 BC034766 AK313128 AK308074 AK309486 AL833938 AK130227 NM_001171740 NM_001171743 NM_016210	25082	-	TSC_hg19_v1_chr3_+_50606919 BX537562 NM_016173 AK314023 AF172244 AK124369	26887	+	AF188706 NM_001171741	28378	-	AJ251367|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AJ251368|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AB011130|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##BC152438|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_001005505|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_001174051|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_006030|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AF040709|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AF042792|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AK310138|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_007024|TMEM115|11070|transmembrane protein 115##AK314166|TMEM115|11070|transmembrane protein 115##BC017367|TMEM115|11070|transmembrane protein 115##BC011948|TMEM115|11070|transmembrane protein 115##AK124438|C3orf18|51161|chromosome 3 open reading frame 18##AK311093|C3orf18|51161|chromosome 3 open reading frame 18##BC034766|C3orf18|51161|chromosome 3 open reading frame 18##AK313128|C3orf18|51161|chromosome 3 open reading frame 18##AK308074|C3orf18|51161|chromosome 3 open reading frame 18##AK309486|C3orf18|51161|chromosome 3 open reading frame 18##AL833938|C3orf18|51161|chromosome 3 open reading frame 18##AK130227|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171740|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171743|C3orf18|51161|chromosome 3 open reading frame 18##NM_016210|C3orf18|51161|chromosome 3 open reading frame 18##BX537562|HEMK1|51409|HemK methyltransferase family member 1##NM_016173|HEMK1|51409|HemK methyltransferase family member 1##AK314023|HEMK1|51409|HemK methyltransferase family member 1##AF172244|HEMK1|51409|HemK methyltransferase family member 1##AK124369|HEMK1|51409|HemK methyltransferase family member 1##AF188706|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171741|C3orf18|51161|chromosome 3 open reading frame 18	0.999742	CTCF.p2:-5:1.000
chr1	10398228	10398340	reg1005663.p2	12.511	+	TSC_hg19_v1_chr1_+_10270680 AK308121 NM_015074 NM_183416 AF257176 AY139835	-127513	+	AB014584 TSC_hg19_v1_chr1_+_10093218	-305071	+	TSC_hg19_v1_chr1_+_10093015 AB028839 NM_001105562 NM_006048	-305269	+	NM_002631 TSC_hg19_v1_chr1_+_10459125 AK300952 AK290404 AK296889 AK303898 AK304423 BC000368 U30255 AB463169 AK298830	60845	+	AF521016 NM_198544 NM_199006 NM_199294	91874	+	TSC_hg19_v1_chr1_+_10490434 AF516753 BC029430	92209	+	AK308121|KIF1B|23095|kinesin family member 1B##NM_015074|KIF1B|23095|kinesin family member 1B##NM_183416|KIF1B|23095|kinesin family member 1B##AF257176|KIF1B|23095|kinesin family member 1B##AY139835|KIF1B|23095|kinesin family member 1B##AB014584|UBE4B|10277|ubiquitination factor E4B##AB028839|UBE4B|10277|ubiquitination factor E4B##NM_001105562|UBE4B|10277|ubiquitination factor E4B##NM_006048|UBE4B|10277|ubiquitination factor E4B##NM_002631|PGD|5226|phosphogluconate dehydrogenase##AK300952|PGD|5226|phosphogluconate dehydrogenase##AK290404|PGD|5226|phosphogluconate dehydrogenase##AK296889|PGD|5226|phosphogluconate dehydrogenase##AK303898|PGD|5226|phosphogluconate dehydrogenase##AK304423|PGD|5226|phosphogluconate dehydrogenase##BC000368|PGD|5226|phosphogluconate dehydrogenase##U30255|PGD|5226|phosphogluconate dehydrogenase##AK298830|PGD|5226|phosphogluconate dehydrogenase##AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1##AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough##BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1	0.825705	CTCF.p2:10:0.826
chr13	49154433	49154587	reg1007159.p1	12.511	+	AK122778 TSC_hg19_v1_chr13_-_49110119	-44392	-	AB209543 TSC_hg19_v1_chr13_-_49107365	-47146	-	TSC_hg19_v1_chr13_-_49107313 AK315703 NM_001268	-47221	-	AB041947 AB038269 BC096832 BC069160 NM_020377 AB590816	126275	+	TSC_hg19_v1_chr13_+_49550058 AJ749706 NM_001079673 BX648706 BX648141 AK056071	395650	+	TSC_hg19_v1_chr13_+_49550791 BC051029	396211	+	AK122778|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AB209543|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK315703|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##NM_001268|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AB041947|CYSLTR2|57105|cysteinyl leukotriene receptor 2##AB038269|CYSLTR2|57105|cysteinyl leukotriene receptor 2##BC096832|CYSLTR2|57105|cysteinyl leukotriene receptor 2##BC069160|CYSLTR2|57105|cysteinyl leukotriene receptor 2##NM_020377|CYSLTR2|57105|cysteinyl leukotriene receptor 2##AJ749706|FNDC3A|22862|fibronectin type III domain containing 3A##NM_001079673|FNDC3A|22862|fibronectin type III domain containing 3A##BX648706|FNDC3A|22862|fibronectin type III domain containing 3A##BX648141|FNDC3A|22862|fibronectin type III domain containing 3A##AK056071|FNDC3A|22862|fibronectin type III domain containing 3A##BC051029|FNDC3A|22862|fibronectin type III domain containing 3A	0.915196	CTCF.p2:16:0.915
chr3	16870427	16870539	reg1005792.p2	12.511	+	U65918 U66726 U66078 BC027595 NM_001351	-223517	-	BX648638 AK303026 NM_001190811	-224213	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	-315259	-	AB029015 NM_001144382	55968	+	BC036392 NM_015184	104098	+	AK310539 NM_001134381	871028	-	U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5	0.269091	CTCF.p2:-18:0.269
chr3	113631898	113632030	reg1006807.p1	12.510	+	AK304142 NM_001172105 AY358725 AK292964	-15605	+	BC035040 NM_017577 TSC_hg19_v1_chr3_+_113557732 AK293884 AK292846	-74253	+	TSC_hg19_v1_chr3_+_113465913 BC013138 AF113129	-166040	+	TSC_hg19_v1_chr3_+_113666756 BC035230 NM_173570 AK127996 AK127025	34763	+	AK125304 AK295855 AK302488 BC150592 AF509494 NM_020817	143447	-	TSC_hg19_v1_chr3_+_113775628 AK299313 BC039265 NM_024638 AL833709 AK296938	143642	+	AK304142|GRAMD1C|54762|GRAM domain containing 1C##NM_001172105|GRAMD1C|54762|GRAM domain containing 1C##AY358725|GRAMD1C|54762|GRAM domain containing 1C##AK292964|GRAMD1C|54762|GRAM domain containing 1C##BC035040|GRAMD1C|54762|GRAM domain containing 1C##NM_017577|GRAMD1C|54762|GRAM domain containing 1C##AK293884|GRAMD1C|54762|GRAM domain containing 1C##AK292846|GRAMD1C|54762|GRAM domain containing 1C##BC013138|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##AF113129|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##BC035230|ZDHHC23|254887|zinc finger, DHHC-type containing 23##NM_173570|ZDHHC23|254887|zinc finger, DHHC-type containing 23##AK127996|ZDHHC23|254887|zinc finger, DHHC-type containing 23##AK127025|ZDHHC23|254887|zinc finger, DHHC-type containing 23##AK125304|KIAA1407|57577|KIAA1407##AK295855|KIAA1407|57577|KIAA1407##AK302488|KIAA1407|57577|KIAA1407##BC150592|KIAA1407|57577|KIAA1407##AF509494|KIAA1407|57577|KIAA1407##NM_020817|KIAA1407|57577|KIAA1407##AK299313|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##BC039265|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##NM_024638|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AL833709|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AK296938|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1	0.222597	CTCF.p2:30:0.223
chr4	69241814	69241913	reg1005447.p1	12.510	+	TSC_hg19_v1_chr4_-_69215804 BC041119 AK056430 NM_001031732 NM_133370	-26101	-	BC126195 AK310210 AL833167 BX537945 AK290904 NM_182502	-130491	-	AK123556 NM_001129907	-158066	-	AK313859 NM_014058 AF064819 AK292787 AY359017 BC113412 BC113414	71323	+	AF548389 NM_001077 U59209	192366	-	U06641 U08854 AF548389 AK289419 AF180322 BC171879 NM_001076	294540	-	BC041119|YTHDC1|91746|YTH domain containing 1##AK056430|YTHDC1|91746|YTH domain containing 1##NM_001031732|YTHDC1|91746|YTH domain containing 1##NM_133370|YTHDC1|91746|YTH domain containing 1##BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B##AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B##AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B##BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B##AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B##NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B##AK123556|TMPRSS11BNL|401136|TMPRSS11B N terminal-like##NM_001129907|TMPRSS11BNL|401136|TMPRSS11B N terminal-like##AK313859|TMPRSS11E|28983|transmembrane protease, serine 11E##NM_014058|TMPRSS11E|28983|transmembrane protease, serine 11E##AF064819|TMPRSS11E|28983|transmembrane protease, serine 11E##AK292787|TMPRSS11E|28983|transmembrane protease, serine 11E##AY359017|TMPRSS11E|28983|transmembrane protease, serine 11E##BC113412|TMPRSS11E|28983|transmembrane protease, serine 11E##BC113414|TMPRSS11E|28983|transmembrane protease, serine 11E##AF548389|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##NM_001077|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17##U59209|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17##U06641|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##U08854|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##AF548389|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##AK289419|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##AF180322|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##BC171879|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##NM_001076|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15	1.912026	CTCF.p2:-8:0.295	CTCF.p2:11:0.752	CTCF.p2:-32:0.865
chr2	65100681	65100820	reg1007236.p1	12.509	+	TSC_hg19_v1_chr2_-_65090764 AK097952	-10009	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-219703	-	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-219901	-	TSC_hg19_v1_chr2_-_65159574 BC037562	58827	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	114850	+	TSC_hg19_v1_chr2_+_65216485 AK298472 AK315986 NM_003038	115741	+	D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##BC037562|LOC400958|400958|uncharacterized LOC400958##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.989294	CTCF.p2:10:0.989
chr6	89692529	89692628	reg1005605.p1	12.509	+	NM_003800 TSC_hg19_v1_chr6_-_89673347	-19231	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	-19270	-	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	-19387	-	TSC_hg19_v1_chr6_+_89790461 NM_006813	97859	+	TSC_hg19_v1_chr6_+_89790469 AK312665 AK130046 U03105 BC018112 AB464669 AY303779	97960	+	TSC_hg19_v1_chr6_+_89791523 BC044919	98965	+	NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_006813|PNRC1|10957|proline-rich nuclear receptor coactivator 1##AK312665|PNRC1|10957|proline-rich nuclear receptor coactivator 1##AK130046|PNRC1|10957|proline-rich nuclear receptor coactivator 1##U03105|PNRC1|10957|proline-rich nuclear receptor coactivator 1##BC018112|PNRC1|10957|proline-rich nuclear receptor coactivator 1##AY303779|PNRC1|10957|proline-rich nuclear receptor coactivator 1##BC044919|PNRC1|10957|proline-rich nuclear receptor coactivator 1	0.960564	CTCF.p2:-14:0.961
chr11	65812694	65812853	reg1007653.p1	12.508	+	AF407333 AB527999 CU689580 BC036522 BC032950 NM_053054	-18855	-	NM_001323 BC031334 U62800 U81233 CR456872	-33285	+	TSC_hg19_v1_chr11_+_65769973 BC005942 AK311961 BC008705	-42649	+	AB053232 NM_033036	3877	-	TSC_hg19_v1_chr11_+_65819834 NM_006842 AK290850 BC010372 BC053577 BX537771 AB463285 BC000401 U41371	7067	+	TSC_hg19_v1_chr11_+_65837841 AK096644 NM_018026 AK098336 AY320283 BC010096 BC052577	25137	+	AF407333|CATSPER1|117144|cation channel, sperm associated 1##BC036522|CATSPER1|117144|cation channel, sperm associated 1##BC032950|CATSPER1|117144|cation channel, sperm associated 1##NM_053054|CATSPER1|117144|cation channel, sperm associated 1##NM_001323|CST6|1474|cystatin E/M##BC031334|CST6|1474|cystatin E/M##U62800|CST6|1474|cystatin E/M##U81233|CST6|1474|cystatin E/M##CR456872|CST6|1474|cystatin E/M##BC005942|BANF1|8815|barrier to autointegration factor 1##AK311961|BANF1|8815|barrier to autointegration factor 1##BC008705|BANF1|8815|barrier to autointegration factor 1##AB053232|GAL3ST3|89792|galactose-3-O-sulfotransferase 3##NM_033036|GAL3ST3|89792|galactose-3-O-sulfotransferase 3##NM_006842|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##AK290850|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BC053577|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BX537771|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BC000401|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##U41371|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##AK096644|PACS1|55690|phosphofurin acidic cluster sorting protein 1##NM_018026|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AK098336|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AY320283|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC010096|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC052577|PACS1|55690|phosphofurin acidic cluster sorting protein 1	1.049128	CTCF.p2:6:0.997
chr16	84958864	84958986	reg1006989.p1	12.508	+	TSC_hg19_v1_chr16_+_84853586 NM_031476 AY358790 AK303887 AK308396 AY358413 BC063012 BC007689 AL136861 AK027395	-105322	+	TSC_hg19_v1_chr16_+_84733611 AL162049 BX537402 D80012	-225295	+	TSC_hg19_v1_chr16_+_84733609 AK293304 AK299618	-225318	+	TSC_hg19_v1_chr16_-_85045098 AK225768	86168	-	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	86204	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	102445	+	NM_031476|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AY358790|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK303887|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK308396|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC063012|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC007689|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AL136861|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK027395|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AL162049|USP10|9100|ubiquitin specific peptidase 10##BX537402|USP10|9100|ubiquitin specific peptidase 10##D80012|USP10|9100|ubiquitin specific peptidase 10##AK293304|USP10|9100|ubiquitin specific peptidase 10##AK299618|USP10|9100|ubiquitin specific peptidase 10##AK225768|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513	0.999708	CTCF.p2:6:1.000
chr2	62145122	62145245	reg1007496.p1	12.507	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-12354	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-29397	-	TSC_hg19_v1_chr2_-_62115733 BC106933 BC106934 AF026291	-29449	-	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	278083	+	BC047439 AK091902 AX747245 NM_198276	588356	-	AK292545 NM_001142615	755802	+	AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106933|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106934|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AF026291|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1	0.746709	CTCF.p2:-12:0.747
chr11	5621633	5621754	reg1005689.p1	12.506	+	AK290172 NM_001003818 NM_001003819 NM_001198644 NM_001198645 BC047564 BC136871 BC140722 BC144424 AB039903 BC065575 AK293295 AK298301 AK316178	-3744	+	NM_058166 AK027664 AK316289 AF220030 CR749260	-4349	+	NM_001005162	-19587	+	AB039902 NM_001003827	19480	+	NM_021616 AK027876 AF220143 AF220144	24533	+	NM_130390 AB039904	31804	+	AK290172|TRIM6|117854|tripartite motif containing 6##NM_001003818|TRIM6|117854|tripartite motif containing 6##NM_001003819|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##NM_001198644|TRIM6|117854|tripartite motif containing 6##NM_001198645|TRIM6|117854|tripartite motif containing 6##BC047564|TRIM6|117854|tripartite motif containing 6##BC136871|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##BC140722|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##BC144424|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##AB039903|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##BC065575|TRIM6|117854|tripartite motif containing 6##AK293295|TRIM6|117854|tripartite motif containing 6##AK298301|TRIM6|117854|tripartite motif containing 6##AK316178|TRIM6|117854|tripartite motif containing 6##NM_058166|TRIM6|117854|tripartite motif containing 6##AK027664|TRIM6|117854|tripartite motif containing 6##AK316289|TRIM6|117854|tripartite motif containing 6##AF220030|TRIM6|117854|tripartite motif containing 6##CR749260|TRIM6|117854|tripartite motif containing 6##NM_001005162|OR52B6|340980|olfactory receptor, family 52, subfamily B, member 6##AB039902|TRIM34|53840|tripartite motif containing 34##NM_001003827|TRIM34|53840|tripartite motif containing 34##NM_021616|TRIM34|53840|tripartite motif containing 34##AK027876|TRIM34|53840|tripartite motif containing 34##AF220143|TRIM34|53840|tripartite motif containing 34##AF220144|TRIM34|53840|tripartite motif containing 34##NM_130390|TRIM34|53840|tripartite motif containing 34##AB039904|TRIM34|53840|tripartite motif containing 34	0.956396	CTCF.p2:-10:0.956
chr12	125815583	125815713	reg1006463.p1	12.506	+	NM_052907	-4487	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-265580	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-265707	+	NM_001136103	2936299	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	3492795	-	BC043528 TSC_hg19_v1_chr12_+_129337985	3522336	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.983965	CTCF.p2:-8:0.984
chr1	116138566	116138696	reg1005549.p1	12.505	+	BC032517 NM_002506 X52599	-257778	-	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	-506515	-	NM_000549	-566217	+	NM_001172411 NM_138959 BC065272 AF481859	45961	+	AB057596 NM_001172412	46618	+	CU692536 DQ893219 DQ896548 D55655 AK225959 TSC_hg19_v1_chr1_-_116311307	172603	-	BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##NM_000549|TSHB|7252|thyroid stimulating hormone, beta##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##DQ893219|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ896548|CASQ2|845|calsequestrin 2 (cardiac muscle)##D55655|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK225959|CASQ2|845|calsequestrin 2 (cardiac muscle)	0.992181	CTCF.p2:2:0.992
chr8	26513113	26513240	reg1007210.p1	12.505	+	NM_001244604 TSC_hg19_v1_chr8_+_26435921 AK299077	-77249	+	TSC_hg19_v1_chr8_+_26435604 U17279 AB370194 AB590733 BT006944 CU691152	-77496	+	TSC_hg19_v1_chr8_+_26435468 AK223557 BC056408 D78013 BC010880 AK291287	-77649	+	U02569 AY491775 AY491776 AY491777 AY491778 AY491779 AY491780 AY491781 D25235 D32201 D32202 NM_000680 NM_033302 NM_033303 NM_033304	209742	-	AK311558 TSC_hg19_v1_chr8_-_26724735	211558	-	TSC_hg19_v1_chr8_-_26724764 AK289548	211582	-	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2##AK299077|DPYSL2|1808|dihydropyrimidinase-like 2##U17279|DPYSL2|1808|dihydropyrimidinase-like 2##AB370194|DPYSL2|1808|dihydropyrimidinase-like 2##AK223557|DPYSL2|1808|dihydropyrimidinase-like 2##BC056408|DPYSL2|1808|dihydropyrimidinase-like 2##D78013|DPYSL2|1808|dihydropyrimidinase-like 2##AK291287|DPYSL2|1808|dihydropyrimidinase-like 2##U02569|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491775|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491776|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491777|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491778|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491780|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491781|ADRA1A|148|adrenergic, alpha-1A-, receptor##D25235|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32201|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32202|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_000680|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033302|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033303|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033304|ADRA1A|148|adrenergic, alpha-1A-, receptor##AK289548|ADRA1A|148|adrenergic, alpha-1A-, receptor	0.99698	CTCF.p2:12:0.997
chr12	103897799	103897930	reg1007473.p1	12.504	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	-8118	-	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-545772	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-546343	+	AY311388 AJ295695 NM_017564 AB052958	83197	+	AB032773 TSC_hg19_v1_chr12_-_104234857	336960	-	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	337115	-	AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3	0.994567	CTCF.p2:5:0.995
chr15	29432127	29432256	reg1008419.p1	12.504	+	NM_001130414 NM_005503 AF047348 BC082986	-218342	+	TSC_hg19_v1_chr15_+_29077475 BC018626	-354709	+	TSC_hg19_v1_chr15_+_29033278 AK302529	-398868	+	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	129779	-	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	129838	-	NM_015307	430735	-	NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1	0.956354	CTCF.p2:-1:0.956
chr9	134225546	134225687	reg1008085.p1	12.504	+	TSC_hg19_v1_chr9_+_134165108 AK075207 NM_032728 BC006362 AK027568 AK315502 AB385550	-60388	+	BC049388 NM_033387 AK095423	-73697	-	TSC_hg19_v1_chr9_+_134001016 D14689 AB159230	-224566	+	TSC_hg19_v1_chr9_+_134269515 BC002872	43950	+	NM_013318 TSC_hg19_v1_chr9_+_134305488	79866	+	CU678266 TSC_hg19_v1_chr9_+_134305548	79924	+	AK075207|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##NM_032728|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC006362|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK027568|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK315502|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC049388|FAM78A|286336|family with sequence similarity 78, member A##NM_033387|FAM78A|286336|family with sequence similarity 78, member A##AK095423|FAM78A|286336|family with sequence similarity 78, member A##D14689|NUP214|8021|nucleoporin 214kDa##AB159230|NUP214|8021|nucleoporin 214kDa##BC002872|PRRC2B|84726|proline-rich coiled-coil 2B##NM_013318|PRRC2B|84726|proline-rich coiled-coil 2B	0.976644	CTCF.p2:-11:0.977
chr10	99469383	99469490	reg1005738.p1	12.503	+	TSC_hg19_v1_chr10_-_99446983 AK223099 AF218019 AK024533 AK222493 AF131791 NM_021732 AF241786 AY505173	-22407	-	TSC_hg19_v1_chr10_+_99400490 BC003167 DQ893537 DQ893758 BT007330	-68952	+	TSC_hg19_v1_chr10_+_99400444 AJ303098 NM_018425	-68994	+	TSC_hg19_v1_chr10_+_99473461 NM_031484	4028	+	BC062544 BC004995 TSC_hg19_v1_chr10_+_99473485 AF325259	4045	+	TSC_hg19_v1_chr10_+_99496884 AK296295 NM_001002262 NM_001174119 NM_001174120 NM_001174121 NM_001174122 NM_144588 AK057481 AK097945 AK299735 AK300438 BC030621	27432	+	AK223099|AVPI1|60370|arginine vasopressin-induced 1##AF218019|AVPI1|60370|arginine vasopressin-induced 1##AK024533|AVPI1|60370|arginine vasopressin-induced 1##AK222493|AVPI1|60370|arginine vasopressin-induced 1##AF131791|AVPI1|60370|arginine vasopressin-induced 1##NM_021732|AVPI1|60370|arginine vasopressin-induced 1##AF241786|AVPI1|60370|arginine vasopressin-induced 1##BC003167|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##DQ893537|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##DQ893758|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##BT007330|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##AJ303098|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##NM_018425|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##NM_031484|MARVELD1|83742|MARVEL domain containing 1##BC062544|MARVELD1|83742|MARVEL domain containing 1##BC004995|MARVELD1|83742|MARVEL domain containing 1##AF325259|MARVELD1|83742|MARVEL domain containing 1##AK296295|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001002262|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174119|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174120|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174121|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174122|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_144588|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK057481|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK097945|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK299735|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK300438|ZFYVE27|118813|zinc finger, FYVE domain containing 27##BC030621|ZFYVE27|118813|zinc finger, FYVE domain containing 27	0.991666	CTCF.p2:0:0.992
chr3	38521443	38521587	reg1007808.p1	12.503	+	TSC_hg19_v1_chr3_+_38495787 NM_001106 BC096243 BC096244 BC096245 BC099642 X77533	-25722	+	TSC_hg19_v1_chr3_+_38388298 AK025728 AK314386 BC030231 BC137076 BC137080 AK293325	-133174	+	TSC_hg19_v1_chr3_+_38388288 BC052984	-133225	+	TSC_hg19_v1_chr3_+_38537830 AK290107 NM_001145464 NM_005107 AB020523 BC104213 BC104212 AK301067 AK308814	16280	+	BC015820 TSC_hg19_v1_chr3_+_38537851 BC065368 AK023235 AK289602	16335	+	TSC_hg19_v1_chr3_+_38537982 AK315814	16465	+	NM_001106|ACVR2B|93|activin A receptor, type IIB##BC096243|ACVR2B|93|activin A receptor, type IIB##BC096244|ACVR2B|93|activin A receptor, type IIB##BC096245|ACVR2B|93|activin A receptor, type IIB##BC099642|ACVR2B|93|activin A receptor, type IIB##X77533|ACVR2B|93|activin A receptor, type IIB##AK025728|XYLB|9942|xylulokinase homolog (H. influenzae)##AK314386|XYLB|9942|xylulokinase homolog (H. influenzae)##BC030231|XYLB|9942|xylulokinase homolog (H. influenzae)##BC137076|XYLB|9942|xylulokinase homolog (H. influenzae)##BC137080|XYLB|9942|xylulokinase homolog (H. influenzae)##AK293325|XYLB|9942|xylulokinase homolog (H. influenzae)##BC052984|XYLB|9942|xylulokinase homolog (H. influenzae)##AK290107|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##NM_001145464|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##NM_005107|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AB020523|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC104213|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC104212|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK301067|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK308814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC015820|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC065368|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK023235|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK289602|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK315814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like	0.987065	CTCF.p2:9:0.987
chr5	58146236	58146381	reg1007773.p1	12.503	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	-267389	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	-359014	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	-390372	-	BC036319 NM_001197223	149450	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	189070	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	425622	-	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.965989	CTCF.p2:12:0.966
chr4	4490249	4490387	reg1007913.p1	12.502	+	TSC_hg19_v1_chr4_+_4388828 AK299657 AK312288 AK301911	-101499	+	TSC_hg19_v1_chr4_+_4388753 AX775767 BC001745	-101574	+	AK125172 NM_001040101 NM_014392	-102336	+	AY453396 BT007150 BT020135 CU677069 AB028741 BC014613 BC071980 TSC_hg19_v1_chr4_-_4543708	53386	-	TSC_hg19_v1_chr4_-_4543741 AK310026	53413	-	TSC_hg19_v1_chr4_-_4543750 NM_016930	53443	-	AK299657|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK312288|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK301911|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##BC001745|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK125172|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##NM_001040101|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##NM_014392|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AY453396|STX18|53407|syntaxin 18##BT007150|STX18|53407|syntaxin 18##BT020135|STX18|53407|syntaxin 18##AB028741|STX18|53407|syntaxin 18##BC014613|STX18|53407|syntaxin 18##BC071980|STX18|53407|syntaxin 18##AK310026|STX18|53407|syntaxin 18##NM_016930|STX18|53407|syntaxin 18	0.949378	CTCF.p2:-10:0.949
chr1	205493537	205493674	reg1008236.p1	12.501	+	AY353237 AY353240 TSC_hg19_v1_chr1_+_205473802 AY353238 BC011526 AY353239	-19783	+	NM_002596 NM_212502 NM_212503 TSC_hg19_v1_chr1_+_205473688 AK293756 AK296320 AK295654	-19900	+	AB084764 AB084765 AB085610 AB096677 AB096678 AB096679 AB096680 AB096681 AB096682 BC036636 AK302392 NM_001001552 NM_001199050 NM_001199051 NM_001199052	-102409	-	AK293816 NM_181644 TSC_hg19_v1_chr1_+_205538141	44522	+	BC036549 AK091896 AX747240 TSC_hg19_v1_chr1_+_205538184 AK304120 AK090831 AX746641 AK295148	44608	+	BC063676 M85164 M85165 TSC_hg19_v1_chr1_-_205601025 BC040145	107301	-	AY353237|CDK18|5129|cyclin-dependent kinase 18##AY353240|CDK18|5129|cyclin-dependent kinase 18##AY353238|CDK18|5129|cyclin-dependent kinase 18##BC011526|CDK18|5129|cyclin-dependent kinase 18##AY353239|CDK18|5129|cyclin-dependent kinase 18##NM_002596|CDK18|5129|cyclin-dependent kinase 18##NM_212502|CDK18|5129|cyclin-dependent kinase 18##NM_212503|CDK18|5129|cyclin-dependent kinase 18##AK293756|CDK18|5129|cyclin-dependent kinase 18##AK296320|CDK18|5129|cyclin-dependent kinase 18##AK295654|CDK18|5129|cyclin-dependent kinase 18##AB084764|LEMD1|93273|LEM domain containing 1##AB084765|LEMD1|93273|LEM domain containing 1##AB085610|LEMD1|93273|LEM domain containing 1##AB096677|LEMD1|93273|LEM domain containing 1##AB096678|LEMD1|93273|LEM domain containing 1##AB096679|LEMD1|93273|LEM domain containing 1##AB096680|LEMD1|93273|LEM domain containing 1##AB096681|LEMD1|93273|LEM domain containing 1##AB096682|LEMD1|93273|LEM domain containing 1##BC036636|LEMD1|93273|LEM domain containing 1##AK302392|LEMD1|93273|LEM domain containing 1##NM_001001552|LEMD1|93273|LEM domain containing 1##NM_001199050|LEMD1|93273|LEM domain containing 1##NM_001199051|LEMD1|93273|LEM domain containing 1##NM_001199052|LEMD1|93273|LEM domain containing 1##AK293816|MFSD4|148808|major facilitator superfamily domain containing 4##NM_181644|MFSD4|148808|major facilitator superfamily domain containing 4##BC036549|MFSD4|148808|major facilitator superfamily domain containing 4##AK091896|MFSD4|148808|major facilitator superfamily domain containing 4##AK304120|MFSD4|148808|major facilitator superfamily domain containing 4##AK090831|MFSD4|148808|major facilitator superfamily domain containing 4##AK295148|MFSD4|148808|major facilitator superfamily domain containing 4##BC063676|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85164|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85165|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC040145|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)	0.998898	CTCF.p2:4:0.999
chr12	32213628	32213748	reg1005533.p2	12.501	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	-101294	+	TSC_hg19_v1_chr12_+_32112348 NM_018169	-101357	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	-268484	-	TSC_hg19_v1_chr12_+_32259750 BC010091	46026	+	AK313430 AK290188 NM_001003398 NM_001714 U90028 BC136372 TSC_hg19_v1_chr12_+_32260263	46485	+	BC039708 BC063403 NM_139241 BC096746 AK057294 BC045552	441351	+	AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)##U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	0.991195	CTCF.p2:11:0.991
chr7	107103721	107103831	reg1005058.p1	12.500	+	AK295910 NM_001244262 TSC_hg19_v1_chr7_+_106809447 AK298504 BC017069 NM_012257	-294337	+	TSC_hg19_v1_chr7_+_106685154 BC075800 M31158 NM_002736 AK128639 AK291441 AB384742 AM392728 AM392771 AM393258 AM393700 CU687290	-418573	+	TSC_hg19_v1_chr7_+_106505893 NM_002649 X83368	-597847	+	NM_005295 AK122621 AK307393	6726	+	TSC_hg19_v1_chr7_-_107204366 HQ258000 AF058718	100634	-	AK294095 NM_181581 AK297195 BC111774	100646	+	AK295910|HBP1|26959|HMG-box transcription factor 1##NM_001244262|HBP1|26959|HMG-box transcription factor 1##AK298504|HBP1|26959|HMG-box transcription factor 1##BC017069|HBP1|26959|HMG-box transcription factor 1##NM_012257|HBP1|26959|HMG-box transcription factor 1##BC075800|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##M31158|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##NM_002736|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK128639|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK291441|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392728|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392771|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393258|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393700|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##NM_005295|GPR22|2845|G protein-coupled receptor 22##AK122621|GPR22|2845|G protein-coupled receptor 22##AK307393|GPR22|2845|G protein-coupled receptor 22##HQ258000|COG5|10466|component of oligomeric golgi complex 5##AF058718|COG5|10466|component of oligomeric golgi complex 5##AK294095|DUS4L|11062|dihydrouridine synthase 4-like (S. cerevisiae)##NM_181581|DUS4L|11062|dihydrouridine synthase 4-like (S. cerevisiae)##AK297195|DUS4L|11062|dihydrouridine synthase 4-like (S. cerevisiae)##BC111774|DUS4L|11062|dihydrouridine synthase 4-like (S. cerevisiae)	0.050654	
chr19	18705221	18705365	reg1008144.p1	12.499	+	NM_001100418 NM_001100419 TSC_hg19_v1_chr19_+_18699611 BC012078 AK000857 AK091925 AX747258 AK054670	-5726	+	NM_001033930 NM_003333 TSC_hg19_v1_chr19_+_18682666 AF348700 BC101830 BC101832 BC143668 D28425 AK314717	-22636	+	TSC_hg19_v1_chr19_+_18668679 AF173381	-36619	+	EU832355 EU832440 AF178684 TSC_hg19_v1_chr19_-_18717548	12227	-	TSC_hg19_v1_chr19_-_18717610 AF059293 BC044634 AY358291	12310	-	TSC_hg19_v1_chr19_-_18717634 AF073515 NM_004750	12353	-	NM_001100418|C19orf60|55049|chromosome 19 open reading frame 60##NM_001100419|C19orf60|55049|chromosome 19 open reading frame 60##BC012078|C19orf60|55049|chromosome 19 open reading frame 60##AK000857|C19orf60|55049|chromosome 19 open reading frame 60##AK091925|C19orf60|55049|chromosome 19 open reading frame 60##AK054670|C19orf60|55049|chromosome 19 open reading frame 60##NM_001033930|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##NM_003333|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##AF348700|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##BC101830|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##BC101832|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##BC143668|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##AK314717|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##AF173381|KXD1|79036|KxDL motif containing 1##EU832355|CRLF1|9244|cytokine receptor-like factor 1##EU832440|CRLF1|9244|cytokine receptor-like factor 1##AF178684|CRLF1|9244|cytokine receptor-like factor 1##AF059293|CRLF1|9244|cytokine receptor-like factor 1##BC044634|CRLF1|9244|cytokine receptor-like factor 1##AY358291|CRLF1|9244|cytokine receptor-like factor 1##AF073515|CRLF1|9244|cytokine receptor-like factor 1##NM_004750|CRLF1|9244|cytokine receptor-like factor 1	0.381996	CTCF.p2:-6:0.382
chr4	160096780	160096910	reg1005347.p1	12.499	+	AK058100 NM_152543	-140513	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-406560	+	TSC_hg19_v1_chr4_+_159690177 NM_020840	-406667	+	AK294459 NM_014247	92152	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	2988306	-	TSC_hg19_v1_chr4_-_164088002 AK097352	3991147	-	AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##NM_020840|FNIP2|57600|folliculin interacting protein 2##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.992579	CTCF.p2:23:0.993
chr8	36948478	36948600	reg1007216.p1	12.499	+	NM_001031836 AK302391 BC028701	-306669	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-1855552	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-3491044	-	TSC_hg19_v1_chr8_-_37457377 AK025743	508829	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	604778	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	645567	+	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2	0.990304	CTCF.p2:3:0.990
chr15	57438734	57438873	reg1008158.p1	12.498	+	TSC_hg19_v1_chr15_+_57210977 M83233	-227803	+	TSC_hg19_v1_chr15_+_57210901 BC050556 BC051769 M80627	-227901	+	TSC_hg19_v1_chr15_+_57210872 AL831981 AK294617 AK310708 AK312710	-227935	+	TSC_hg19_v1_chr15_+_57511630 AK294991 AK304007 AK311359 AK308101 NM_207040 BX537967 AM393573	72864	+	AK056673 AK307410 NM_001252335 NM_032866 TSC_hg19_v1_chr15_+_57668732 AY274808 BC030995 AY610514	229914	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	445362	+	M83233|TCF12|6938|transcription factor 12##BC050556|TCF12|6938|transcription factor 12##BC051769|TCF12|6938|transcription factor 12##M80627|TCF12|6938|transcription factor 12##AL831981|TCF12|6938|transcription factor 12##AK294617|TCF12|6938|transcription factor 12##AK310708|TCF12|6938|transcription factor 12##AK312710|TCF12|6938|transcription factor 12##AK294991|TCF12|6938|transcription factor 12##AK304007|TCF12|6938|transcription factor 12##AK311359|TCF12|6938|transcription factor 12##AK308101|TCF12|6938|transcription factor 12##NM_207040|TCF12|6938|transcription factor 12##BX537967|TCF12|6938|transcription factor 12##AM393573|TCF12|6938|transcription factor 12##AK056673|CGNL1|84952|cingulin-like 1##AK307410|CGNL1|84952|cingulin-like 1##NM_001252335|CGNL1|84952|cingulin-like 1##NM_032866|CGNL1|84952|cingulin-like 1##AY274808|CGNL1|84952|cingulin-like 1##BC030995|CGNL1|84952|cingulin-like 1##AY610514|CGNL1|84952|cingulin-like 1##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1	0.920451	CTCF.p2:-17:0.920
chr21	43528033	43528150	reg1004616.p1	12.498	+	AB096965 AY771619 AY771620 NM_001004416 NM_173568	-36666	+	AB051810 AB051811 NM_001199527 NM_001199528	-45024	+	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	-97620	-	AF323660 NM_207627 AF323661 NM_207628	91768	+	AF323662 NM_207629	108095	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	111202	+	AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323662|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207629|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	0.116598	
chr18	57490964	57491093	reg1006370.p1	12.497	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-126378	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	-126437	-	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	-464542	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	76201	+	AK314130 NM_005912	548972	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1666746	+	NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2	0.047825	
chr2	132559467	132559582	reg1006242.p1	12.497	+	BC043584 NM_214461	-291	-	AF038169 NM_013310	-79461	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-274018	+	AK122643 NM_001508	614622	+	AY358628 BC017318 AK309849 AK075487 TSC_hg19_v1_chr2_-_133427783 AK130005 AK094501 AK123029	868179	-	NM_144586	868956	-	BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39##AY358628|LYPD1|116372|LY6/PLAUR domain containing 1##BC017318|LYPD1|116372|LY6/PLAUR domain containing 1##AK309849|LYPD1|116372|LY6/PLAUR domain containing 1##AK075487|LYPD1|116372|LY6/PLAUR domain containing 1##AK130005|LYPD1|116372|LY6/PLAUR domain containing 1##AK094501|LYPD1|116372|LY6/PLAUR domain containing 1##AK123029|LYPD1|116372|LY6/PLAUR domain containing 1##NM_144586|LYPD1|116372|LY6/PLAUR domain containing 1	1.0531	CTCF.p2:-2:0.999
chr4	147163214	147163359	reg1007593.p1	12.496	+	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	-66419	+	BC033879 TSC_hg19_v1_chr4_-_146859976	-303318	-	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	-303609	-	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	279710	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	396805	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	703712	-	NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29	0.999228	CTCF.p2:0:0.999
chr5	132795981	132796100	reg1005985.p1	12.496	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-363149	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-367637	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-389937	+	TSC_hg19_v1_chr5_-_132948202 AK055684	152159	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	152198	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	508335	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.971299	CTCF.p2:2:0.971
chr7	116759609	116759739	reg1006306.p1	12.496	+	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	-99309	+	TSC_hg19_v1_chr7_+_116660271 AK093212	-99407	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	-166101	+	BC078170 AK056742 NM_003391 X07876	203661	-	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	307871	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	360364	+	AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##AK093212|ST7|7982|suppression of tumorigenicity 7##AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	0.974065	CTCF.p2:17:0.974
chrX	132926583	132926709	reg1008203.p1	12.496	+	TSC_hg19_v1_chrX_-_132549514 AK312605 AY358507 BC017166	-377178	-	AB528412 CU677845 DQ891809 DQ894992 AF064826 AY052833 AF030186 NM_001448 TSC_hg19_v1_chrX_-_132549316	-377472	-	EU446842 BC074762 BC117336 BC126361 AB464736 AF219119 NM_016521	-574406	-	AB527294 CU690242 DQ349136 DQ349137 DQ349138 DQ893658 DQ895822 TSC_hg19_v1_chrX_-_133119622 Z37987 L47176 AK222761 AK222766 AK310689 BC035972 U50410	192903	-	TSC_hg19_v1_chrX_-_133119645 L47125 AK300168 NM_001164617 NM_001164618 NM_001164619 NM_004484	193005	-	NM_001101357	444430	+	AK312605|GPC4|2239|glypican 4##AY358507|GPC4|2239|glypican 4##BC017166|GPC4|2239|glypican 4##DQ891809|GPC4|2239|glypican 4##DQ894992|GPC4|2239|glypican 4##AF064826|GPC4|2239|glypican 4##AY052833|GPC4|2239|glypican 4##AF030186|GPC4|2239|glypican 4##NM_001448|GPC4|2239|glypican 4##EU446842|TFDP3|51270|transcription factor Dp family, member 3##BC074762|TFDP3|51270|transcription factor Dp family, member 3##BC117336|TFDP3|51270|transcription factor Dp family, member 3##BC126361|TFDP3|51270|transcription factor Dp family, member 3##AF219119|TFDP3|51270|transcription factor Dp family, member 3##NM_016521|TFDP3|51270|transcription factor Dp family, member 3##DQ349136|GPC3|2719|glypican 3##DQ349137|GPC3|2719|glypican 3##DQ349138|GPC3|2719|glypican 3##DQ893658|GPC3|2719|glypican 3##DQ895822|GPC3|2719|glypican 3##Z37987|GPC3|2719|glypican 3##L47176|GPC3|2719|glypican 3##AK222761|GPC3|2719|glypican 3##AK222766|GPC3|2719|glypican 3##AK310689|GPC3|2719|glypican 3##BC035972|GPC3|2719|glypican 3##U50410|GPC3|2719|glypican 3##L47125|GPC3|2719|glypican 3##AK300168|GPC3|2719|glypican 3##NM_001164617|GPC3|2719|glypican 3##NM_001164618|GPC3|2719|glypican 3##NM_001164619|GPC3|2719|glypican 3##NM_004484|GPC3|2719|glypican 3##NM_001101357|CCDC160|347475|coiled-coil domain containing 160	1.051498	CTCF.p2:1:0.999
chr10	27015170	27015296	reg1005381.p1	12.495	+	TSC_hg19_v1_chr10_+_26986597 AK024802 AK223414 AB210838 NM_014317 BC063635 BC049211 AF118395	-28587	+	AK096048 TSC_hg19_v1_chr10_-_26986612	-28649	-	TSC_hg19_v1_chr10_+_26727703 AY152730	-287527	+	TSC_hg19_v1_chr10_-_27057776 AK315914	42584	-	AB529081 FJ380057 FJ380058 FJ380059 TSC_hg19_v1_chr10_-_27149883 AF540955 AK296751 AF001628 AF006516 BC013238 U87166 AB209268 BC024254 AK291823	134607	-	TSC_hg19_v1_chr10_-_27149916 AF260262 AK298646 AK126803 AB040151	134706	-	AK024802|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK223414|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AB210838|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##NM_014317|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC063635|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC049211|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AF118395|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AY152730|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK315914|ABI1|10006|abl-interactor 1##FJ380057|ABI1|10006|abl-interactor 1##FJ380058|ABI1|10006|abl-interactor 1##FJ380059|ABI1|10006|abl-interactor 1##AF540955|ABI1|10006|abl-interactor 1##AK296751|ABI1|10006|abl-interactor 1##AF001628|ABI1|10006|abl-interactor 1##AF006516|ABI1|10006|abl-interactor 1##BC013238|ABI1|10006|abl-interactor 1##U87166|ABI1|10006|abl-interactor 1##AB209268|ABI1|10006|abl-interactor 1##BC024254|ABI1|10006|abl-interactor 1##AK291823|ABI1|10006|abl-interactor 1##AF260262|ABI1|10006|abl-interactor 1##AK298646|ABI1|10006|abl-interactor 1##AK126803|ABI1|10006|abl-interactor 1##AB040151|ABI1|10006|abl-interactor 1	0.880835	CTCF.p2:-11:0.881
chr20	33548700	33548830	reg1006906.p1	12.495	+	NM_020884	-5062	+	TSC_hg19_v1_chr20_-_33543587 AK311421 AK312492 BC007927 NM_000178	-5174	-	TSC_hg19_v1_chr20_-_33543562 AK293144 L42531 U34683 AK311567	-5201	-	TSC_hg19_v1_chr20_-_33680592 AB590540 CU680522 BC013144	131707	-	TSC_hg19_v1_chr20_-_33680600 AK074106	131831	-	TSC_hg19_v1_chr20_-_33680611 AK298958 AK303476 AK315582 NM_015638 NM_199368	131875	-	NM_020884|MYH7B|57644|myosin, heavy chain 7B, cardiac muscle, beta##AK311421|GSS|2937|glutathione synthetase##AK312492|GSS|2937|glutathione synthetase##BC007927|GSS|2937|glutathione synthetase##NM_000178|GSS|2937|glutathione synthetase##AK293144|GSS|2937|glutathione synthetase##U34683|GSS|2937|glutathione synthetase##AK311567|GSS|2937|glutathione synthetase##BC013144|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK074106|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK298958|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK303476|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK315582|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##NM_015638|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##NM_199368|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein	0.055006	
chr7	149983358	149983475	reg1005148.p1	12.495	+	TSC_hg19_v1_chr7_+_149571066 BX640846 AK290086 AK094602 AK098362 AK172725 DQ995344 AY037164	-412335	+	BC023225 TSC_hg19_v1_chr7_-_149570892 BC028735	-412521	-	TSC_hg19_v1_chr7_+_149570049 AF452639 AK057700 NM_001100592 NM_145230	-413374	+	AB039791 NM_001164459	16652	-	TSC_hg19_v1_chr7_+_150020443 NM_001142928 NM_023942 AK055954	36988	+	TSC_hg19_v1_chr7_+_150020552 BC001354	37160	+	BX640846|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK290086|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK094602|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK098362|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK172725|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##DQ995344|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AY037164|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##BC023225|LOC401431|401431|uncharacterized LOC401431##BC028735|LOC401431|401431|uncharacterized LOC401431##AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AB039791|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)##NM_001164459|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)##NM_001142928|LRRC61|65999|leucine rich repeat containing 61##NM_023942|LRRC61|65999|leucine rich repeat containing 61##AK055954|LRRC61|65999|leucine rich repeat containing 61##BC001354|LRRC61|65999|leucine rich repeat containing 61	0.049769	
chr18	61558289	61558414	reg1007112.p1	12.494	+	AK313159 BC012609 NM_001143818 NM_002575 Y00630 J02685 J03603 M18082	-3388	+	NM_003784 AF027866 AK300828 BC069417 BC069442 BC069547 AK290876 BC106743 BC106744	-115672	+	NM_001040147 D88575	-138060	+	TSC_hg19_v1_chr18_+_61575223 AK314936	16863	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	24393	+	NM_001123366	58236	+	AK313159|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##BC012609|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_001143818|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_002575|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##Y00630|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J02685|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J03603|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##M18082|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_003784|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AF027866|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK300828|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069417|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069442|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069547|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK290876|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106743|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106744|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##NM_001040147|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##D88575|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK314936|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing	0.0	
chr11	116662078	116662204	reg1007283.p1	12.493	+	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	-3403	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	-3426	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	-18443	-	AK292739 AK315229 AK308047 NM_001166598 NM_052968	979	-	HQ258218 HQ258399 BC113594 BC113596 BC074764 X13629 M13654 NM_000482 TSC_hg19_v1_chr11_-_116694025	31825	-	TSC_hg19_v1_chr11_+_116700622 BC121081 BC134419 NM_000040 BC027977	38483	+	BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK292739|APOA5|116519|apolipoprotein A-V##AK315229|APOA5|116519|apolipoprotein A-V##AK308047|APOA5|116519|apolipoprotein A-V##NM_001166598|APOA5|116519|apolipoprotein A-V##NM_052968|APOA5|116519|apolipoprotein A-V##HQ258218|APOA4|337|apolipoprotein A-IV##HQ258399|APOA4|337|apolipoprotein A-IV##BC113594|APOA4|337|apolipoprotein A-IV##BC113596|APOA4|337|apolipoprotein A-IV##BC074764|APOA4|337|apolipoprotein A-IV##X13629|APOA4|337|apolipoprotein A-IV##M13654|APOA4|337|apolipoprotein A-IV##NM_000482|APOA4|337|apolipoprotein A-IV##BC121081|APOC3|345|apolipoprotein C-III##BC134419|APOC3|345|apolipoprotein C-III##NM_000040|APOC3|345|apolipoprotein C-III##BC027977|APOC3|345|apolipoprotein C-III	0.31056	CTCF.p2:-6:0.311
chr22	43742549	43742667	reg1005801.p1	12.493	+	AB528481 AF525689 BC127263 BC047916 TSC_hg19_v1_chr22_-_43739356 AK127719 NM_173050	-3270	-	TSC_hg19_v1_chr22_-_43583141 NM_015140	-159452	-	D63487 AL590888 CT841516 TSC_hg19_v1_chr22_-_43583100 BC001070	-159514	-	TSC_hg19_v1_chr22_+_43808019 AK290541 AK297276 AK299516 AK299531 NM_001044370	65409	+	TSC_hg19_v1_chr22_+_43808109 AK289774	65509	+	BC039315 TSC_hg19_v1_chr22_-_44208121 AK296679 AK292498 AK292411 AK058069 NM_022785 NM_198856	465533	-	AF525689|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC127263|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC047916|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##AK127719|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##NM_173050|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##NM_015140|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##D63487|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##AL590888|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##CT841516|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##BC001070|TTLL12|23170|tubulin tyrosine ligase-like family, member 12##AK290541|MPPED1|758|metallophosphoesterase domain containing 1##AK297276|MPPED1|758|metallophosphoesterase domain containing 1##AK299516|MPPED1|758|metallophosphoesterase domain containing 1##AK299531|MPPED1|758|metallophosphoesterase domain containing 1##NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1##AK289774|MPPED1|758|metallophosphoesterase domain containing 1##BC039315|EFCAB6|64800|EF-hand calcium binding domain 6##AK296679|EFCAB6|64800|EF-hand calcium binding domain 6##AK292498|EFCAB6|64800|EF-hand calcium binding domain 6##AK292411|EFCAB6|64800|EF-hand calcium binding domain 6##AK058069|EFCAB6|64800|EF-hand calcium binding domain 6##NM_022785|EFCAB6|64800|EF-hand calcium binding domain 6##NM_198856|EFCAB6|64800|EF-hand calcium binding domain 6	0.839014	CTCF.p2:9:0.839
chr12	79949447	79949586	reg1007962.p1	12.492	+	CR627387 NM_001135806 AK308743	-510065	+	TSC_hg19_v1_chr12_+_79258794 BC058917	-690699	+	TSC_hg19_v1_chr12_+_79258597 BC041373	-690924	+	AB590922 CR536549 BC007018 TSC_hg19_v1_chr12_-_80084318	134699	-	U63809 TSC_hg19_v1_chr12_-_80084784 NM_002583	135249	-	AK302692 NM_001143886	358174	-	CR627387|SYT1|6857|synaptotagmin I##NM_001135806|SYT1|6857|synaptotagmin I##AK308743|SYT1|6857|synaptotagmin I##BC058917|SYT1|6857|synaptotagmin I##BC041373|SYT1|6857|synaptotagmin I##CR536549|PAWR|5074|PRKC, apoptosis, WT1, regulator##BC007018|PAWR|5074|PRKC, apoptosis, WT1, regulator##U63809|PAWR|5074|PRKC, apoptosis, WT1, regulator##NM_002583|PAWR|5074|PRKC, apoptosis, WT1, regulator##AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	0.165435	
chr17	36641231	36641359	reg1007028.p1	12.492	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	-56590	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	-133432	+	AY584611 NM_001004334	-141603	-	TSC_hg19_v1_chr17_-_36729122 AK295027	87827	-	BC029278 TSC_hg19_v1_chr17_-_36760969	119643	-	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	120901	-	NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1	0.998857	CTCF.p2:1:0.999
chr4	148440117	148440234	reg1006953.p1	12.490	+	TSC_hg19_v1_chr4_+_148402244 AK312812 BC022511 AK304451 S45956	-37865	+	TSC_hg19_v1_chr4_+_148402117 D90348 S57498 X61950	-38052	+	NM_001166055 NM_001957 AK315931 TSC_hg19_v1_chr4_+_148402083	-38100	+	TSC_hg19_v1_chr4_+_148538547 BC046128 NM_018241	98358	+	TSC_hg19_v1_chr4_+_148538568 AK001708	98431	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	165089	-	AK312812|EDNRA|1909|endothelin receptor type A##BC022511|EDNRA|1909|endothelin receptor type A##AK304451|EDNRA|1909|endothelin receptor type A##S45956|EDNRA|1909|endothelin receptor type A##D90348|EDNRA|1909|endothelin receptor type A##S57498|EDNRA|1909|endothelin receptor type A##X61950|EDNRA|1909|endothelin receptor type A##NM_001166055|EDNRA|1909|endothelin receptor type A##NM_001957|EDNRA|1909|endothelin receptor type A##AK315931|EDNRA|1909|endothelin receptor type A##BC046128|TMEM184C|55751|transmembrane protein 184C##NM_018241|TMEM184C|55751|transmembrane protein 184C##AK001708|TMEM184C|55751|transmembrane protein 184C##BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)	0.810932	CTCF.p2:-2:0.811
chr1	153325056	153325175	reg1005648.p1	12.489	+	AY035377 NM_020393 AF242518	-4083	-	BC128114 BC128115 BC069741 BC069798 BC069801 AY035376 NM_052891	-41936	-	BC108290 NM_000427	-92937	+	AK311882 NM_002965 X06233 TSC_hg19_v1_chr1_+_153330329 BC047681 AF086362	5223	+	X97859 BC070294 D83664 NM_005621	22950	-	Y00278 AK291328 X06234 NM_002964	38488	-	AY035377|PGLYRP4|57115|peptidoglycan recognition protein 4##NM_020393|PGLYRP4|57115|peptidoglycan recognition protein 4##AF242518|PGLYRP4|57115|peptidoglycan recognition protein 4##BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3##BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3##NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3##BC108290|LOR|4014|loricrin##NM_000427|LOR|4014|loricrin##AK311882|S100A9|6280|S100 calcium binding protein A9##NM_002965|S100A9|6280|S100 calcium binding protein A9##X06233|S100A9|6280|S100 calcium binding protein A9##BC047681|S100A9|6280|S100 calcium binding protein A9##AF086362|S100A9|6280|S100 calcium binding protein A9##X97859|S100A12|6283|S100 calcium binding protein A12##BC070294|S100A12|6283|S100 calcium binding protein A12##D83664|S100A12|6283|S100 calcium binding protein A12##NM_005621|S100A12|6283|S100 calcium binding protein A12##Y00278|S100A8|6279|S100 calcium binding protein A8##AK291328|S100A8|6279|S100 calcium binding protein A8##X06234|S100A8|6279|S100 calcium binding protein A8##NM_002964|S100A8|6279|S100 calcium binding protein A8	0.999088	CTCF.p2:-18:0.999
chr15	57114045	57114178	reg1006923.p1	12.489	+	TSC_hg19_v1_chr15_-_57025818 BX641000 BX640707 NM_001002843 NM_001002844 NM_017661 AK295159	-88279	-	TSC_hg19_v1_chr15_-_57025690 AB046804 BC053649 BC064359 AK310882 AK289739 BC130451 BC136412	-88399	-	TSC_hg19_v1_chr15_-_56757262 BC031046 AK310029 BC012554 BC034991 AK002084 NM_018365	-356825	-	TSC_hg19_v1_chr15_-_57210733 AK096657 BC036541	96625	-	TSC_hg19_v1_chr15_+_57210823 NM_003205 NM_207036 NM_207037 NM_207038	96716	+	TSC_hg19_v1_chr15_+_57210872 AL831981 AK294617 AK310708 AK312710	96757	+	BX641000|ZNF280D|54816|zinc finger protein 280D##BX640707|ZNF280D|54816|zinc finger protein 280D##NM_001002843|ZNF280D|54816|zinc finger protein 280D##NM_001002844|ZNF280D|54816|zinc finger protein 280D##NM_017661|ZNF280D|54816|zinc finger protein 280D##AK295159|ZNF280D|54816|zinc finger protein 280D##AB046804|ZNF280D|54816|zinc finger protein 280D##BC053649|ZNF280D|54816|zinc finger protein 280D##BC064359|ZNF280D|54816|zinc finger protein 280D##AK310882|ZNF280D|54816|zinc finger protein 280D##AK289739|ZNF280D|54816|zinc finger protein 280D##BC130451|ZNF280D|54816|zinc finger protein 280D##BC136412|ZNF280D|54816|zinc finger protein 280D##BC031046|MNS1|55329|meiosis-specific nuclear structural 1##BC012554|MNS1|55329|meiosis-specific nuclear structural 1##BC034991|MNS1|55329|meiosis-specific nuclear structural 1##AK002084|MNS1|55329|meiosis-specific nuclear structural 1##NM_018365|MNS1|55329|meiosis-specific nuclear structural 1##AK096657|LOC145783|145783|uncharacterized LOC145783##NM_003205|TCF12|6938|transcription factor 12##NM_207036|TCF12|6938|transcription factor 12##NM_207037|TCF12|6938|transcription factor 12##NM_207038|TCF12|6938|transcription factor 12##AL831981|TCF12|6938|transcription factor 12##AK294617|TCF12|6938|transcription factor 12##AK310708|TCF12|6938|transcription factor 12##AK312710|TCF12|6938|transcription factor 12	0.982897	CTCF.p2:-16:0.983
chr12	29470830	29470951	reg1005806.p1	12.488	+	TSC_hg19_v1_chr12_+_29376598 BC022267 NM_018099 AK027756 AK129857 AK001927	-94219	+	AL136843 TSC_hg19_v1_chr12_+_29302210 AK001324 AK314670 BC018460	-168698	+	AY289196 NM_018318 AB587421	-1060750	+	TSC_hg19_v1_chr12_-_29534081 BC064522	63185	-	AK222799 TSC_hg19_v1_chr12_-_29534084 AL834128	63193	-	TSC_hg19_v1_chr12_-_29534109 AF183410 AF216751 AF302767 BC000887 BC107794 NM_016570	63225	-	BC022267|FAR2|55711|fatty acyl CoA reductase 2##NM_018099|FAR2|55711|fatty acyl CoA reductase 2##AK027756|FAR2|55711|fatty acyl CoA reductase 2##AK129857|FAR2|55711|fatty acyl CoA reductase 2##AK001927|FAR2|55711|fatty acyl CoA reductase 2##AL136843|FAR2|55711|fatty acyl CoA reductase 2##AK001324|FAR2|55711|fatty acyl CoA reductase 2##AK314670|FAR2|55711|fatty acyl CoA reductase 2##AY289196|CCDC91|55297|coiled-coil domain containing 91##NM_018318|CCDC91|55297|coiled-coil domain containing 91##BC064522|ERGIC2|51290|ERGIC and golgi 2##AK222799|ERGIC2|51290|ERGIC and golgi 2##AL834128|ERGIC2|51290|ERGIC and golgi 2##AF183410|ERGIC2|51290|ERGIC and golgi 2##AF216751|ERGIC2|51290|ERGIC and golgi 2##AF302767|ERGIC2|51290|ERGIC and golgi 2##BC000887|ERGIC2|51290|ERGIC and golgi 2##BC107794|ERGIC2|51290|ERGIC and golgi 2##NM_016570|ERGIC2|51290|ERGIC and golgi 2	0.884599	CTCF.p2:-28:0.885
chr2	219922845	219922966	reg1006218.p1	12.488	+	AK127189 AK302678 AK302688 BC031585 NM_152389 NM_194302 BC047637	-16663	-	AF166331 NM_005209 BC006285 NM_057093 NM_057094	-64782	-	BC023511 NM_017521 Y08976	-72580	-	BC136587 BC136588 NM_002181	2332	-	TSC_hg19_v1_chr2_-_220025558 BC012732 AK022672 AJ972687 BC030986 NM_024782	102634	-	DQ891019 DQ894199 CU688862 AK091919 BC030243 AK298256 AK298277 AK055730 NM_001144889 NM_001144890 NM_144712	111856	-	AK127189|CCDC108|255101|coiled-coil domain containing 108##AK302678|CCDC108|255101|coiled-coil domain containing 108##AK302688|CCDC108|255101|coiled-coil domain containing 108##BC031585|CCDC108|255101|coiled-coil domain containing 108##NM_152389|CCDC108|255101|coiled-coil domain containing 108##NM_194302|CCDC108|255101|coiled-coil domain containing 108##BC047637|CCDC108|255101|coiled-coil domain containing 108##AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2##BC023511|FEV|54738|FEV (ETS oncogene family)##NM_017521|FEV|54738|FEV (ETS oncogene family)##Y08976|FEV|54738|FEV (ETS oncogene family)##BC136587|IHH|3549|Indian hedgehog##BC136588|IHH|3549|Indian hedgehog##NM_002181|IHH|3549|Indian hedgehog##BC012732|NHEJ1|79840|nonhomologous end-joining factor 1##AK022672|NHEJ1|79840|nonhomologous end-joining factor 1##AJ972687|NHEJ1|79840|nonhomologous end-joining factor 1##BC030986|NHEJ1|79840|nonhomologous end-joining factor 1##NM_024782|NHEJ1|79840|nonhomologous end-joining factor 1##DQ891019|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##DQ894199|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##BC030243|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298256|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298277|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK055730|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144889|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144890|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_144712|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3	0.929833	CTCF.p2:-14:0.930
chr2	62639304	62639412	reg1003535.p2	12.488	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-216092	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-506529	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-523572	-	BC047439 AK091902 AX747245 NM_198276	94181	-	AK292545 NM_001142615	261627	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	293608	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.999555	CTCF.p2:43:1.000
chr17	42072362	42072503	reg1007484.p1	12.487	+	X00491 NM_002722	-52616	-	BC030287 CR936730 NM_005374 AK311166	-87313	-	AL136554 X82895 TSC_hg19_v1_chr17_-_41984895 AK299518 AK223560 AK294564 AK299286	-87537	-	BC041057 NM_004160	9404	-	AK314432 AK300923 BC111713 AY116538 NM_153006 AK074407	9586	+	CU675657 AB097008 AK130810 AK313855 TSC_hg19_v1_chr17_-_42092332 BC007438 NM_032376 AK172826 AK294237	19934	-	X00491|PPY|5539|pancreatic polypeptide##NM_002722|PPY|5539|pancreatic polypeptide##BC030287|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##CR936730|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##NM_005374|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK311166|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AL136554|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299518|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK223560|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK294564|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299286|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##BC041057|PYY|5697|peptide YY##NM_004160|PYY|5697|peptide YY##AK314432|NAGS|162417|N-acetylglutamate synthase##AK300923|NAGS|162417|N-acetylglutamate synthase##BC111713|NAGS|162417|N-acetylglutamate synthase##AY116538|NAGS|162417|N-acetylglutamate synthase##NM_153006|NAGS|162417|N-acetylglutamate synthase##AK074407|NAGS|162417|N-acetylglutamate synthase##AB097008|TMEM101|84336|transmembrane protein 101##AK130810|TMEM101|84336|transmembrane protein 101##AK313855|TMEM101|84336|transmembrane protein 101##BC007438|TMEM101|84336|transmembrane protein 101##NM_032376|TMEM101|84336|transmembrane protein 101##AK172826|TMEM101|84336|transmembrane protein 101##AK294237|TMEM101|84336|transmembrane protein 101	0.626308	CTCF.p2:17:0.626
chr21	32203611	32203749	reg1006244.p1	12.487	+	AJ457063 AB096962 NM_181606	-1692	-	BC130397 BC133033 AB096961 AJ457064 NM_175857	-18116	-	NM_181619 AB096960 BC105029 BC105031	-75960	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	50178	-	AB096964 NM_001099219	207114	-	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	727678	-	AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##BC130397|KRTAP8-1|337879|keratin associated protein 8-1##BC133033|KRTAP8-1|337879|keratin associated protein 8-1##AB096961|KRTAP8-1|337879|keratin associated protein 8-1##AJ457064|KRTAP8-1|337879|keratin associated protein 8-1##NM_175857|KRTAP8-1|337879|keratin associated protein 8-1##NM_181619|KRTAP21-1|337977|keratin associated protein 21-1##AB096960|KRTAP21-1|337977|keratin associated protein 21-1##BC105029|KRTAP21-1|337977|keratin associated protein 21-1##BC105031|KRTAP21-1|337977|keratin associated protein 21-1##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1	0.999814	CTCF.p2:10:0.970
chr8	110573993	110574117	reg1006126.p1	12.487	+	NM_004215 BC005249 BC022506 AK308950 AB007619 AF006265 AY515724	-21645	+	TSC_hg19_v1_chr8_+_110551942 NM_198120 AK290651 BC017729	-22070	+	AY219181 NM_177531 BC093096 AK128617	-199326	+	AK297182 TSC_hg19_v1_chr8_-_110620232	46171	-	NM_001099756	81363	-	AY705385 AB384607 TSC_hg19_v1_chr8_-_110656972	82874	-	NM_004215|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC005249|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC022506|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK308950|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AB007619|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AF006265|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AY515724|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##NM_198120|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK290651|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC017729|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AY219181|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##NM_177531|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##BC093096|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##AK297182|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099756|SYBU|55638|syntabulin (syntaxin-interacting)##AY705385|SYBU|55638|syntabulin (syntaxin-interacting)	0.95213	CTCF.p2:-6:0.952
chr9	97890032	97890152	reg1006747.p1	12.487	+	AK298959 TSC_hg19_v1_chr9_+_97766501 AK300486	-123617	+	NM_001193329 AJ560639	-368095	+	BC029616 TSC_hg19_v1_chr9_+_97488999	-401089	+	X66894 NM_001243743	189428	-	AK312548 AK222871 TSC_hg19_v1_chr9_-_98079974 BC015748 X66893 AK304887 NM_000136 NM_001243744	189839	-	TSC_hg19_v1_chr9_-_98268874 AB209495 AB233423 AB233424 CU692174	378781	-	AK298959|C9orf3|84909|chromosome 9 open reading frame 3##AK300486|C9orf3|84909|chromosome 9 open reading frame 3##NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3##AJ560639|C9orf3|84909|chromosome 9 open reading frame 3##BC029616|C9orf3|84909|chromosome 9 open reading frame 3##X66894|FANCC|2176|Fanconi anemia, complementation group C##NM_001243743|FANCC|2176|Fanconi anemia, complementation group C##AK312548|FANCC|2176|Fanconi anemia, complementation group C##AK222871|FANCC|2176|Fanconi anemia, complementation group C##BC015748|FANCC|2176|Fanconi anemia, complementation group C##X66893|FANCC|2176|Fanconi anemia, complementation group C##AK304887|FANCC|2176|Fanconi anemia, complementation group C##NM_000136|FANCC|2176|Fanconi anemia, complementation group C##NM_001243744|FANCC|2176|Fanconi anemia, complementation group C##AB209495|PTCH1|5727|patched 1##AB233423|PTCH1|5727|patched 1##AB233424|PTCH1|5727|patched 1	0.762497	CTCF.p2:7:0.748
chr1	179836987	179837118	reg1007798.p1	12.486	+	TSC_hg19_v1_chr1_-_179833583 AK021454	-3468	-	AK313887 TSC_hg19_v1_chr1_+_179712524	-124536	+	TSC_hg19_v1_chr1_+_179712425 AK310711	-124628	+	BC065285 TSC_hg19_v1_chr1_-_179846939 AK057623 AK289793 BC024226 AF464140 BC094724 NM_001199260 NM_022347 NM_145034	9876	-	AK001780 TSC_hg19_v1_chr1_+_179851431 NM_015602	14431	+	TSC_hg19_v1_chr1_+_179851807 AK310012	14763	+	AK313887|FAM163A|148753|family with sequence similarity 163, member A##AK310711|FAM163A|148753|family with sequence similarity 163, member A##AK057623|TOR1AIP2|163590|torsin A interacting protein 2##AK289793|TOR1AIP2|163590|torsin A interacting protein 2##AF464140|TOR1AIP2|163590|torsin A interacting protein 2##BC094724|TOR1AIP2|163590|torsin A interacting protein 2##NM_001199260|TOR1AIP2|163590|torsin A interacting protein 2##NM_022347|TOR1AIP2|163590|torsin A interacting protein 2##NM_145034|TOR1AIP2|163590|torsin A interacting protein 2##AK001780|TOR1AIP1|26092|torsin A interacting protein 1##NM_015602|TOR1AIP1|26092|torsin A interacting protein 1##AK310012|TOR1AIP1|26092|torsin A interacting protein 1	0.933895	CTCF.p2:0:0.934
chr20	1490004	1490129	reg1007282.p1	12.486	+	AK097113 TSC_hg19_v1_chr20_-_1472172 NM_001122962 NM_001134836	-17866	-	AK297072 TSC_hg19_v1_chr20_-_1472142	-17932	-	AY424277 AK095499 AK294440 TSC_hg19_v1_chr20_-_1472067	-18031	-	DQ891297 EU176577 BC033502 NM_178460	48256	-	AB590891 CU692960 BC131747 Y10376 BC025286 BC075835 TSC_hg19_v1_chr20_-_1600656 AK289866 AK313517 BX537992 NM_001083910 NM_001135844 NM_006065	110572	-	AY748247 AY748248 CU687894 BC064532 BC020629 AK292745 NM_001039508 NM_018556 NM_080816	148325	-	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2##NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2##AK297072|SIRPB2|284759|signal-regulatory protein beta 2##AY424277|SIRPB2|284759|signal-regulatory protein beta 2##AK095499|SIRPB2|284759|signal-regulatory protein beta 2##AK294440|SIRPB2|284759|signal-regulatory protein beta 2##DQ891297|SIRPD|128646|signal-regulatory protein delta##EU176577|SIRPD|128646|signal-regulatory protein delta##BC033502|SIRPD|128646|signal-regulatory protein delta##NM_178460|SIRPD|128646|signal-regulatory protein delta##BC131747|SIRPB1|10326|signal-regulatory protein beta 1##Y10376|SIRPB1|10326|signal-regulatory protein beta 1##BC025286|SIRPB1|10326|signal-regulatory protein beta 1##BC075835|SIRPB1|10326|signal-regulatory protein beta 1##AK289866|SIRPB1|10326|signal-regulatory protein beta 1##BX537992|SIRPB1|10326|signal-regulatory protein beta 1##NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1##NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1##NM_006065|SIRPB1|10326|signal-regulatory protein beta 1##AY748247|SIRPG|55423|signal-regulatory protein gamma##AY748248|SIRPG|55423|signal-regulatory protein gamma##BC064532|SIRPG|55423|signal-regulatory protein gamma##BC020629|SIRPG|55423|signal-regulatory protein gamma##AK292745|SIRPG|55423|signal-regulatory protein gamma##NM_001039508|SIRPG|55423|signal-regulatory protein gamma##NM_018556|SIRPG|55423|signal-regulatory protein gamma##NM_080816|SIRPG|55423|signal-regulatory protein gamma	0.025529	
chr2	218751570	218751697	reg1005822.p1	12.485	+	BC029516 NM_003284	-1026852	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-1191373	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-1192067	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	57148	-	AK001785 TSC_hg19_v1_chr2_-_218843551	91913	-	TSC_hg19_v1_chr2_-_218867719 AK309785	116090	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.99988	CTCF.p2:0:1.000
chr22	24721136	24721263	reg1006196.p1	12.485	+	TSC_hg19_v1_chr22_+_24666804 NM_001145468 NM_015330 AK097129 AK301482 AB209022 AL832425 BC005093 BC136471	-54359	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	-80220	-	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	-143755	+	TSC_hg19_v1_chr22_+_24819870 EU036694	98681	+	NM_000675 AK123058 EU036693 AK301420 BC013780	102366	+	AK314727 CR627429 CR456375 NM_016327 BC131703 TSC_hg19_v1_chr22_+_24891299 AF163312 AB013885 BC033388 AB528843 BC139840 BC139843 CU013080 CU013368	170042	+	NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##EU036694|ADORA2A|135|adenosine A2a receptor##NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor##AK314727|UPB1|51733|ureidopropionase, beta##CR627429|UPB1|51733|ureidopropionase, beta##CR456375|UPB1|51733|ureidopropionase, beta##NM_016327|UPB1|51733|ureidopropionase, beta##BC131703|UPB1|51733|ureidopropionase, beta##AF163312|UPB1|51733|ureidopropionase, beta##AB013885|UPB1|51733|ureidopropionase, beta##BC033388|UPB1|51733|ureidopropionase, beta##BC139840|UPB1|51733|ureidopropionase, beta##BC139843|UPB1|51733|ureidopropionase, beta##CU013080|UPB1|51733|ureidopropionase, beta##CU013368|UPB1|51733|ureidopropionase, beta	0.92887	CTCF.p2:-14:0.929
chr3	177495673	177495799	reg1006504.p1	12.485	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-580677	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	-580785	-	TSC_hg19_v1_chr3_-_176914267 BX648935	-581486	-	BC017825 NM_181361	758487	+	AF209747 NM_005832	780816	+	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	1293829	-	AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3	0.398382	CTCF.p2:-5:0.398
chr9	71614660	71614772	reg1005745.p1	12.485	+	TSC_hg19_v1_chr9_-_71590760 AK057188	-23958	-	CU680482 TSC_hg19_v1_chr9_+_71395147	-219600	+	TSC_hg19_v1_chr9_+_71394980 NM_138333 BC013062 AK126379 AK304099	-219765	+	DQ890764 DQ893927 AB463461 BC039888 NM_002732	14307	-	NM_000144 NM_001161706 NM_181425	35762	+	TSC_hg19_v1_chr9_+_71650693 BC048097 BC023633 CU690546	35971	+	NM_138333|FAM122A|116224|family with sequence similarity 122A##BC013062|FAM122A|116224|family with sequence similarity 122A##AK126379|FAM122A|116224|family with sequence similarity 122A##DQ890764|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##DQ893927|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##BC039888|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_002732|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_000144|FXN|2395|frataxin##NM_001161706|FXN|2395|frataxin##NM_181425|FXN|2395|frataxin##BC048097|FXN|2395|frataxin##BC023633|FXN|2395|frataxin	0.989839	CTCF.p2:19:0.990
chr10	11155280	11155390	reg1005393.p1	12.484	+	U69546 TSC_hg19_v1_chr10_+_11060121	-95219	+	AF090694 TSC_hg19_v1_chr10_+_11060072	-95264	+	TSC_hg19_v1_chr10_+_11059882 AK314087 NM_006561 BC036391	-95445	+	AK299983 NM_001025076 NM_001083591 TSC_hg19_v1_chr10_+_11207008	51634	+	AK297313 TSC_hg19_v1_chr10_+_11207057 AK299992 AF036956 AK293164 AF432906	51761	+	TSC_hg19_v1_chr10_+_11207244 AK316354	51910	+	U69546|CELF2|10659|CUGBP, Elav-like family member 2##AF090694|CELF2|10659|CUGBP, Elav-like family member 2##AK314087|CELF2|10659|CUGBP, Elav-like family member 2##NM_006561|CELF2|10659|CUGBP, Elav-like family member 2##BC036391|CELF2|10659|CUGBP, Elav-like family member 2##AK299983|CELF2|10659|CUGBP, Elav-like family member 2##NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2##NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2##AK297313|CELF2|10659|CUGBP, Elav-like family member 2##AK299992|CELF2|10659|CUGBP, Elav-like family member 2##AF036956|CELF2|10659|CUGBP, Elav-like family member 2##AK293164|CELF2|10659|CUGBP, Elav-like family member 2##AF432906|CELF2|10659|CUGBP, Elav-like family member 2##AK316354|CELF2|10659|CUGBP, Elav-like family member 2	0.512033	CTCF.p2:-11:0.512
chr17	4324033	4324144	reg1004637.p1	12.484	+	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	-54180	-	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	-54377	-	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	-156937	-	AK172832 NM_182538 TSC_hg19_v1_chr17_+_4337247 BC023646	13154	+	NM_001124758 BC041772 TSC_hg19_v1_chr17_+_4402177 AB441165	78148	+	EU832503 BC050546 TSC_hg19_v1_chr17_-_4458680 AF147709 AK303150 AK301622 AK307948 NM_001105538 NM_014520	134586	-	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK172832|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_182538|SPNS3|201305|spinster homolog 3 (Drosophila)##BC023646|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_001124758|SPNS2|124976|spinster homolog 2 (Drosophila)##BC041772|SPNS2|124976|spinster homolog 2 (Drosophila)##AB441165|SPNS2|124976|spinster homolog 2 (Drosophila)##EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a##BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a##AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a##AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a##AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a##AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a	0.465707	CTCF.p2:-5:0.466
chr5	129103676	129103813	reg1005714.p1	12.484	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-307691	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-673319	+	TSC_hg19_v1_chr5_+_128301169 BX537383 NM_014031 NM_001017372 AK313456 AL833117	-802547	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	136743	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	1397187	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	1397246	-	AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##BX537383|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_014031|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_001017372|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AK313456|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AL833117|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1	1.723038	CTCF.p2:27:1.000	CTCF.p2:-49:0.723
chr14	48386686	48386830	reg1008401.p1	12.483	+	AK309211 NM_001113498	-242602	-	BC028193 NM_182830	-574343	-	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	-1265775	-	BC032813 BC035313 L31610 U14973 AK026649 BC015974 NM_001030001 NM_001032 AB055780 AK307833 TSC_hg19_v1_chr14_-_50053095	1666335	-	NM_152329 NM_203467 TSC_hg19_v1_chr14_+_50065473 BC030142 BX648029	1678702	+	TSC_hg19_v1_chr14_-_50087339 BC003145 BC000741 BC070207 AK311959 AB063609 NM_001001 BC107716	1700586	-	AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC032813|RPS29|6235|ribosomal protein S29##BC035313|RPS29|6235|ribosomal protein S29##L31610|RPS29|6235|ribosomal protein S29##U14973|RPS29|6235|ribosomal protein S29##AK026649|RPS29|6235|ribosomal protein S29##BC015974|RPS29|6235|ribosomal protein S29##NM_001030001|RPS29|6235|ribosomal protein S29##NM_001032|RPS29|6235|ribosomal protein S29##AB055780|RPS29|6235|ribosomal protein S29##NM_152329|LRR1|122769|leucine rich repeat protein 1##NM_203467|LRR1|122769|leucine rich repeat protein 1##BC030142|LRR1|122769|leucine rich repeat protein 1##BX648029|LRR1|122769|leucine rich repeat protein 1##BC003145|RPL36AL|6166|ribosomal protein L36a-like##BC000741|RPL36AL|6166|ribosomal protein L36a-like##BC070207|RPL36AL|6166|ribosomal protein L36a-like##AK311959|RPL36AL|6166|ribosomal protein L36a-like##AB063609|RPL36AL|6166|ribosomal protein L36a-like##NM_001001|RPL36AL|6166|ribosomal protein L36a-like##BC107716|RPL36AL|6166|ribosomal protein L36a-like	0.992639	CTCF.p2:-8:0.993
chr3	197180995	197181127	reg1007482.p1	12.483	+	BC140841 BC144651 TSC_hg19_v1_chr3_-_197025506 AK304280 NM_001098424 NM_001204386 NM_004087 U13896 U13897 AK310596	-155587	-	TSC_hg19_v1_chr3_-_197024987 BC015560 BC028486 AK310893	-156128	-	AK294855 NM_001204387 NM_001204388	-270060	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	101781	-	NM_203315 TSC_hg19_v1_chr3_-_197300209	119140	-	TSC_hg19_v1_chr3_-_197354756 BC067856 AK309924 BC094848 AK299863 BC080518 AK311713	173692	-	BC140841|DLG1|1739|discs, large homolog 1 (Drosophila)##BC144651|DLG1|1739|discs, large homolog 1 (Drosophila)##AK304280|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001098424|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204386|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_004087|DLG1|1739|discs, large homolog 1 (Drosophila)##U13896|DLG1|1739|discs, large homolog 1 (Drosophila)##U13897|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310596|DLG1|1739|discs, large homolog 1 (Drosophila)##BC015560|DLG1|1739|discs, large homolog 1 (Drosophila)##BC028486|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310893|DLG1|1739|discs, large homolog 1 (Drosophila)##AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203315|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC067856|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK309924|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC094848|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK299863|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC080518|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK311713|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene	0.336393	CTCF.p2:10:0.336
chr3	130257988	130258132	reg1006165.p1	12.482	+	EU085556 NM_153264 AM906078	-193642	+	TSC_hg19_v1_chr3_-_129830331 BC071676	-427711	-	TSC_hg19_v1_chr3_-_129830276 BC083497	-427765	-	AM774225 NM_001102608	21117	+	BC127105 BC127106 TSC_hg19_v1_chr3_-_130465651 AK314219 BC110318 BC009899 BC017332 BC057239 NM_014602	207543	-	NM_001199180 NM_001199181 NM_001199182 AK296470	311346	+	EU085556|COL6A5|256076|collagen, type VI, alpha 5##NM_153264|COL6A5|256076|collagen, type VI, alpha 5##AM906078|COL6A5|256076|collagen, type VI, alpha 5##AM774225|COL6A6|131873|collagen, type VI, alpha 6##NM_001102608|COL6A6|131873|collagen, type VI, alpha 6##BC127105|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC127106|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AK314219|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC110318|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC009899|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC017332|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC057239|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_014602|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_001199180|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199181|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199182|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK296470|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	0.970029	CTCF.p2:0:0.970
chr14	34318548	34318661	reg1004912.p2	12.481	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-910114	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1520068	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-1772098	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	101545	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	612883	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	690281	-	AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein	0.376958	CTCF.p2:-5:0.377
chr18	22306784	22306910	reg1006899.p1	12.481	+	AF312230 BC069136 NM_001143828 NM_001160166 NM_021624 AB045370 BC112348 AB044934 AF307973 AF325356 AF329449 AJ298292 AY008280 AY136745 DQ835186 DQ835187	-266205	+	TSC_hg19_v1_chr18_+_22006671 AK312727 BC034016 AB026264 AB587563 CU689806 DQ893141 EU176771 AF208694	-300182	+	TSC_hg19_v1_chr18_+_22006608 AK292533 NM_018439 BC036074	-300240	+	TSC_hg19_v1_chr18_-_22931121 AB385259	624301	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	625190	-	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	625316	-	AF312230|HRH4|59340|histamine receptor H4##BC069136|HRH4|59340|histamine receptor H4##NM_001143828|HRH4|59340|histamine receptor H4##NM_001160166|HRH4|59340|histamine receptor H4##NM_021624|HRH4|59340|histamine receptor H4##AB045370|HRH4|59340|histamine receptor H4##BC112348|HRH4|59340|histamine receptor H4##AB044934|HRH4|59340|histamine receptor H4##AF307973|HRH4|59340|histamine receptor H4##AF325356|HRH4|59340|histamine receptor H4##AF329449|HRH4|59340|histamine receptor H4##AJ298292|HRH4|59340|histamine receptor H4##AY008280|HRH4|59340|histamine receptor H4##AY136745|HRH4|59340|histamine receptor H4##DQ835186|HRH4|59340|histamine receptor H4##DQ835187|HRH4|59340|histamine receptor H4##AK312727|IMPACT|55364|Impact homolog (mouse)##BC034016|IMPACT|55364|Impact homolog (mouse)##AB026264|IMPACT|55364|Impact homolog (mouse)##DQ893141|IMPACT|55364|Impact homolog (mouse)##EU176771|IMPACT|55364|Impact homolog (mouse)##AF208694|IMPACT|55364|Impact homolog (mouse)##AK292533|IMPACT|55364|Impact homolog (mouse)##NM_018439|IMPACT|55364|Impact homolog (mouse)##BC036074|IMPACT|55364|Impact homolog (mouse)##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521	0.961872	CTCF.p2:3:0.962
chr20	37274916	37275025	reg1006305.p1	12.481	+	TSC_hg19_v1_chr20_+_37230452 NM_001164431	-44457	+	BC029594 NM_001018082 BC119704 BC119705	-65130	+	TSC_hg19_v1_chr20_+_37101489 AB033045 BC047482 NM_020336 AK304242 CR936800	-173462	+	NM_080552 TSC_hg19_v1_chr20_+_37353115	78142	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	78189	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	102142	+	NM_001164431|ARHGAP40|343578|Rho GTPase activating protein 40##BC029594|ADIG|149685|adipogenin##NM_001018082|ADIG|149685|adipogenin##BC119704|ADIG|149685|adipogenin##BC119705|ADIG|149685|adipogenin##AB033045|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##BC047482|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##NM_020336|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##AK304242|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##CR936800|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##NM_080552|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)	0.99327	CTCF.p2:-12:0.993
chr1	201968873	201968998	reg1007614.p1	12.480	+	TSC_hg19_v1_chr1_+_201951788 BC012166 AJ242586 DQ896012 EU176398 AJ296161	-17143	+	TSC_hg19_v1_chr1_+_201951775 NM_020216 AK097372 BC001064	-17169	+	NM_006335 BC015098 TSC_hg19_v1_chr1_+_201924640 AK315602 BC009784 BC007106 BC020833 X97544 AF106622 BC000294 BC004439 BC013823	-44297	+	NM_001114309 NM_004433 TSC_hg19_v1_chr1_+_201979714 AK309265 AK312273 U97156 BC003569 U73843 U73844 AF016295	10773	+	U66894 TSC_hg19_v1_chr1_+_201979752 AK225446 AF517841	10849	+	AK295576 AK313044 TSC_hg19_v1_chr1_+_202092044 BC050334 NM_004767 AK222639 Y16280	123082	+	BC012166|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AJ242586|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##DQ896012|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##EU176398|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AJ296161|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##NM_020216|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AK097372|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##BC001064|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##NM_006335|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC015098|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##AK315602|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC009784|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC007106|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC020833|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##X97544|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##AF106622|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC000294|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC004439|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC013823|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##NM_001114309|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##NM_004433|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK309265|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK312273|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U97156|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##BC003569|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73843|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73844|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF016295|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U66894|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK225446|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF517841|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK295576|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK313044|GPR37L1|9283|G protein-coupled receptor 37 like 1##BC050334|GPR37L1|9283|G protein-coupled receptor 37 like 1##NM_004767|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK222639|GPR37L1|9283|G protein-coupled receptor 37 like 1##Y16280|GPR37L1|9283|G protein-coupled receptor 37 like 1	0.938507	CTCF.p2:7:0.939
chr12	3312283	3312401	reg1004517.p2	12.479	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-125780	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-243281	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-243748	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	288099	+	AK125333 TSC_hg19_v1_chr12_-_3601984	289643	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	549926	-	NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B	0.998459	CTCF.p2:-11:0.998
chr1	242630981	242631098	reg1005642.p2	12.478	+	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	-18269	-	BC132986 BC132988 AF276659 BC127722 NM_001004343	-468665	-	NM_003686 NM_006027 AF042282 AF091740 AF060479 AF084974	-618954	+	AK098092 NM_152666	56958	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	787317	-	TSC_hg19_v1_chr1_-_243418566 AK310003 BC050722	787533	-	AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_003686|EXO1|9156|exonuclease 1##NM_006027|EXO1|9156|exonuclease 1##AF042282|EXO1|9156|exonuclease 1##AF091740|EXO1|9156|exonuclease 1##AF060479|EXO1|9156|exonuclease 1##AF084974|EXO1|9156|exonuclease 1##AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa##AK310003|CEP170|9859|centrosomal protein 170kDa##BC050722|CEP170|9859|centrosomal protein 170kDa	0.018806	
chr6	150338142	150338268	reg1006195.p1	12.477	+	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	-53043	+	AK299895 AB052906 NM_025217 TSC_hg19_v1_chr6_+_150263162 AX772820 BC034689 AY358665 AF304378 AY026825 CU689938	-75041	+	AY172580 BC096719 BC098152 AY172579 NM_001001788 AK310157	-94005	-	BC131600 AB528849 AY039682 NM_130900	8428	-	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	52008	-	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	126036	+	AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##AK299895|ULBP2|80328|UL16 binding protein 2##AB052906|ULBP2|80328|UL16 binding protein 2##NM_025217|ULBP2|80328|UL16 binding protein 2##AX772820|ULBP2|80328|UL16 binding protein 2##BC034689|ULBP2|80328|UL16 binding protein 2##AY358665|ULBP2|80328|UL16 binding protein 2##AF304378|ULBP2|80328|UL16 binding protein 2##AY026825|ULBP2|80328|UL16 binding protein 2##AY172580|RAET1G|353091|retinoic acid early transcript 1G##BC096719|RAET1G|353091|retinoic acid early transcript 1G##BC098152|RAET1G|353091|retinoic acid early transcript 1G##AY172579|RAET1G|353091|retinoic acid early transcript 1G##NM_001001788|RAET1G|353091|retinoic acid early transcript 1G##AK310157|RAET1G|353091|retinoic acid early transcript 1G##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L##AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C	0.99948	CTCF.p2:31:0.999
chr11	64948468	64948580	reg1006416.p1	12.476	+	BC137244 BC137246 BC144548 AY820305 NM_001008778	-10859	+	TSC_hg19_v1_chr11_-_64902005 AK126912 AL834262 NM_032431 NM_172230	-46520	-	BC030530 TSC_hg19_v1_chr11_-_64901988 AB058713 AK074148	-46556	-	NM_001198868 AK315556 TSC_hg19_v1_chr11_+_64948825	292	+	NM_001198869 TSC_hg19_v1_chr11_+_64949220 BC075862	673	+	TSC_hg19_v1_chr11_+_64949270 AK311001	742	+	BC137244|SPDYC|387778|speedy homolog C (Xenopus laevis)##BC137246|SPDYC|387778|speedy homolog C (Xenopus laevis)##BC144548|SPDYC|387778|speedy homolog C (Xenopus laevis)##AY820305|SPDYC|387778|speedy homolog C (Xenopus laevis)##NM_001008778|SPDYC|387778|speedy homolog C (Xenopus laevis)##AK126912|SYVN1|84447|synovial apoptosis inhibitor 1, synoviolin##AL834262|SYVN1|84447|synovial apoptosis inhibitor 1, synoviolin##NM_032431|SYVN1|84447|synovial apoptosis inhibitor 1, synoviolin##NM_172230|SYVN1|84447|synovial apoptosis inhibitor 1, synoviolin##BC030530|SYVN1|84447|synovial apoptosis inhibitor 1, synoviolin##AB058713|SYVN1|84447|synovial apoptosis inhibitor 1, synoviolin##AK074148|SYVN1|84447|synovial apoptosis inhibitor 1, synoviolin##NM_001198868|CAPN1|823|calpain 1, (mu/I) large subunit##AK315556|CAPN1|823|calpain 1, (mu/I) large subunit##NM_001198869|CAPN1|823|calpain 1, (mu/I) large subunit##BC075862|CAPN1|823|calpain 1, (mu/I) large subunit##AK311001|CAPN1|823|calpain 1, (mu/I) large subunit	0.971511	CTCF.p2:-29:0.972
chr8	24272640	24272759	reg1006875.p1	12.476	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	-30792	+	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	-121092	+	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	-560388	-	BC058037 AK292492 NM_003817 AF215824 CU691292 AB527100	25832	+	TSC_hg19_v1_chr8_+_24771273 AK296226 BC071752 EF560736 NM_005382	498572	+	EF560737 TSC_hg19_v1_chr8_+_24771276 BC096757 GQ129242 GQ129243 AB527839	498592	+	NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1##BC058037|ADAM7|8756|ADAM metallopeptidase domain 7##AK292492|ADAM7|8756|ADAM metallopeptidase domain 7##NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7##AF215824|ADAM7|8756|ADAM metallopeptidase domain 7##AK296226|NEFM|4741|neurofilament, medium polypeptide##BC071752|NEFM|4741|neurofilament, medium polypeptide##EF560736|NEFM|4741|neurofilament, medium polypeptide##NM_005382|NEFM|4741|neurofilament, medium polypeptide##EF560737|NEFM|4741|neurofilament, medium polypeptide##BC096757|NEFM|4741|neurofilament, medium polypeptide##GQ129242|NEFM|4741|neurofilament, medium polypeptide##GQ129243|NEFM|4741|neurofilament, medium polypeptide	0.180528	
chr9	34253019	34253155	reg1005321.p1	12.476	+	TSC_hg19_v1_chr9_+_34179058 AF222043 BC098141 BC098316 BC099726 BC100668	-74005	+	AK223235 AK309329 TSC_hg19_v1_chr9_+_34179047	-74040	+	TSC_hg19_v1_chr9_+_34179039 AK074995 BC020950 AK074745 AK295482	-74047	+	TSC_hg19_v1_chr9_-_34329214 NM_194313 AK310014	76124	-	NM_001161 NM_001244390 NM_147172 NM_147173 TSC_hg19_v1_chr9_+_34329566 AK310574 U30313	76451	+	TSC_hg19_v1_chr9_-_34376864 BC070098 NM_020702	123846	-	AF222043|UBAP1|51271|ubiquitin associated protein 1##BC098141|UBAP1|51271|ubiquitin associated protein 1##BC098316|UBAP1|51271|ubiquitin associated protein 1##BC099726|UBAP1|51271|ubiquitin associated protein 1##BC100668|UBAP1|51271|ubiquitin associated protein 1##AK223235|UBAP1|51271|ubiquitin associated protein 1##AK309329|UBAP1|51271|ubiquitin associated protein 1##AK074995|UBAP1|51271|ubiquitin associated protein 1##BC020950|UBAP1|51271|ubiquitin associated protein 1##AK074745|UBAP1|51271|ubiquitin associated protein 1##AK295482|UBAP1|51271|ubiquitin associated protein 1##NM_194313|KIF24|347240|kinesin family member 24##AK310014|KIF24|347240|kinesin family member 24##NM_001161|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_001244390|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_147172|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_147173|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##U30313|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##BC070098|KIAA1161|57462|KIAA1161##NM_020702|KIAA1161|57462|KIAA1161	0.964017	CTCF.p2:13:0.964
chr12	100013776	100013897	reg1006072.p1	12.474	+	AK294191 NM_001204067	-464969	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	-465279	-	AY356353 AK315954 AM980945 AK294994 TSC_hg19_v1_chr12_-_99288638 AK295988 NM_001204065 NM_001204079 NM_001204080 NM_001204081	-725249	-	NM_153364 AK312767 BC031221	27694	+	NM_152788	364595	-	BC127017 AK125813 TSC_hg19_v1_chr12_-_100536637 BC014891	522713	-	AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_153364|FAM71C|196472|family with sequence similarity 71, member C##AK312767|FAM71C|196472|family with sequence similarity 71, member C##BC031221|FAM71C|196472|family with sequence similarity 71, member C##NM_152788|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC127017|UHRF1BP1L|23074|UHRF1 binding protein 1-like##AK125813|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC014891|UHRF1BP1L|23074|UHRF1 binding protein 1-like	1.124496	CTCF.p2:4:0.932
chr19	47894798	47894918	reg1006007.p1	12.474	+	NM_014681 TSC_hg19_v1_chr19_+_47852571 AK304710	-42289	+	AB038237 NM_018485	-54488	+	BC008982 NM_001736 TSC_hg19_v1_chr19_+_47813117 M62505	-81756	+	AB463870 AK289950 TSC_hg19_v1_chr19_-_47922380	27502	-	TSC_hg19_v1_chr19_-_47922396 BC069251	27540	-	TSC_hg19_v1_chr19_-_47922468 BC025404	27648	-	NM_014681|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34##AK304710|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34##AB038237|GPR77|27202|G protein-coupled receptor 77##NM_018485|GPR77|27202|G protein-coupled receptor 77##BC008982|C5AR1|728|complement component 5a receptor 1##NM_001736|C5AR1|728|complement component 5a receptor 1##M62505|C5AR1|728|complement component 5a receptor 1##AK289950|MEIS3|56917|Meis homeobox 3##BC069251|MEIS3|56917|Meis homeobox 3##BC025404|MEIS3|56917|Meis homeobox 3	0.946228	CTCF.p2:17:0.946
chr7	120195130	120195264	reg1006627.p1	12.474	+	AK307139 AB028967 NM_012281	-281493	+	NM_019644 AK302407	-2330463	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-2371026	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	302823	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	302963	-	AK000096 NM_019071 NM_198267 TSC_hg19_v1_chr7_+_120590832 AF161419 BC009777 BC093091 AY007790 AK291905 AF074968 BC073865 AF180298 BC062634 BC093689 BC101609 BC143316 BC009776 BC010851 BC146417 BC153171 AB463778	395684	+	AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12##AK000096|ING3|54556|inhibitor of growth family, member 3##NM_019071|ING3|54556|inhibitor of growth family, member 3##NM_198267|ING3|54556|inhibitor of growth family, member 3##AF161419|ING3|54556|inhibitor of growth family, member 3##BC009777|ING3|54556|inhibitor of growth family, member 3##BC093091|ING3|54556|inhibitor of growth family, member 3##AY007790|ING3|54556|inhibitor of growth family, member 3##AK291905|ING3|54556|inhibitor of growth family, member 3##AF074968|ING3|54556|inhibitor of growth family, member 3##BC073865|ING3|54556|inhibitor of growth family, member 3##AF180298|ING3|54556|inhibitor of growth family, member 3##BC062634|ING3|54556|inhibitor of growth family, member 3##BC093689|ING3|54556|inhibitor of growth family, member 3##BC101609|ING3|54556|inhibitor of growth family, member 3##BC143316|ING3|54556|inhibitor of growth family, member 3##BC009776|ING3|54556|inhibitor of growth family, member 3##BC010851|ING3|54556|inhibitor of growth family, member 3##BC146417|ING3|54556|inhibitor of growth family, member 3##BC153171|ING3|54556|inhibitor of growth family, member 3	0.939937	CTCF.p2:23:0.940
chr12	113900307	113900407	reg1006185.p2	12.473	+	TSC_hg19_v1_chr12_+_113860217 BC009849 NM_138432 BC091479 AF134473	-40160	+	J05037 TSC_hg19_v1_chr12_-_113841693 AK292760 BC020750 NM_006843	-58683	-	TSC_hg19_v1_chr12_+_113796394 BC030618	-103971	+	AF291181 NM_022363	9519	-	CU678656 EU831458 EU831545 AB385372 AB014582 BC004289 BC006137 AL117547 TSC_hg19_v1_chr12_-_114404131 AK291444 AK314606 NM_001146698 NM_001146699 NM_016196	503747	-	NM_080718 U80987 U89353 AB527531 EU446658	941347	-	BC009849|SDSL|113675|serine dehydratase-like##NM_138432|SDSL|113675|serine dehydratase-like##BC091479|SDSL|113675|serine dehydratase-like##AF134473|SDSL|113675|serine dehydratase-like##J05037|SDS|10993|serine dehydratase##AK292760|SDS|10993|serine dehydratase##BC020750|SDS|10993|serine dehydratase##NM_006843|SDS|10993|serine dehydratase##BC030618|PLBD2|196463|phospholipase B domain containing 2##AF291181|LHX5|64211|LIM homeobox 5##NM_022363|LHX5|64211|LIM homeobox 5##EU831458|RBM19|9904|RNA binding motif protein 19##EU831545|RBM19|9904|RNA binding motif protein 19##AB014582|RBM19|9904|RNA binding motif protein 19##BC004289|RBM19|9904|RNA binding motif protein 19##BC006137|RBM19|9904|RNA binding motif protein 19##AL117547|RBM19|9904|RNA binding motif protein 19##AK291444|RBM19|9904|RNA binding motif protein 19##AK314606|RBM19|9904|RNA binding motif protein 19##NM_001146698|RBM19|9904|RNA binding motif protein 19##NM_001146699|RBM19|9904|RNA binding motif protein 19##NM_016196|RBM19|9904|RNA binding motif protein 19##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5	0.978795	CTCF.p2:-2:0.979
chr5	167696475	167696621	reg1007081.p1	12.473	+	HE578282 HE578283 NM_001122679	-984706	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-4763905	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-4766260	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	22273	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	216926	+	TSC_hg19_v1_chr5_+_167956546 AX721195	260069	+	NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.997219	CTCF.p2:-7:0.997
chr1	157596032	157596142	reg1005783.p1	12.472	+	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	-28286	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	-73857	-	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-487804	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	74440	-	CU686705 AK301113 AY043465 AF459633 AY358130 AK303549 BC069185 NM_030764	150805	-	CU689698 AF329488 BC021274 AK315748 AK096690 BC033690 AF459634 AY043464 NM_001159397 NM_001159398 NM_052938	193798	-	AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3##AK301113|FCRL2|79368|Fc receptor-like 2##AY043465|FCRL2|79368|Fc receptor-like 2##AF459633|FCRL2|79368|Fc receptor-like 2##AY358130|FCRL2|79368|Fc receptor-like 2##AK303549|FCRL2|79368|Fc receptor-like 2##BC069185|FCRL2|79368|Fc receptor-like 2##NM_030764|FCRL2|79368|Fc receptor-like 2##AF329488|FCRL1|115350|Fc receptor-like 1##BC021274|FCRL1|115350|Fc receptor-like 1##AK315748|FCRL1|115350|Fc receptor-like 1##AK096690|FCRL1|115350|Fc receptor-like 1##BC033690|FCRL1|115350|Fc receptor-like 1##AF459634|FCRL1|115350|Fc receptor-like 1##AY043464|FCRL1|115350|Fc receptor-like 1##NM_001159397|FCRL1|115350|Fc receptor-like 1##NM_001159398|FCRL1|115350|Fc receptor-like 1##NM_052938|FCRL1|115350|Fc receptor-like 1	0.071383	
chr17	38514861	38514978	reg1004642.p1	12.472	+	NM_001024809	-16649	+	TSC_hg19_v1_chr17_+_38474548 AK130192	-40372	+	TSC_hg19_v1_chr17_+_38474521 AK292205 FJ487576	-40395	+	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	6027	-	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	59205	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	84900	+	NM_001024809|RARA|5914|retinoic acid receptor, alpha##AK130192|RARA|5914|retinoic acid receptor, alpha##AK292205|RARA|5914|retinoic acid receptor, alpha##FJ487576|RARA|5914|retinoic acid receptor, alpha##AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4	0.999775	CTCF.p2:-5:1.000
chr2	65144897	65145033	reg1005155.p1	12.472	+	TSC_hg19_v1_chr2_-_65090764 AK097952	-54224	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-263918	-	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-264116	-	TSC_hg19_v1_chr2_-_65159574 BC037562	14612	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	70635	+	TSC_hg19_v1_chr2_+_65216485 AK298472 AK315986 NM_003038	71526	+	D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##BC037562|LOC400958|400958|uncharacterized LOC400958##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.950648	CTCF.p2:-18:0.951
chr3	50264902	50264999	reg1005115.p1	12.472	+	TSC_hg19_v1_chr3_+_50242705 NM_006841 AK299677 BX537382 AK293801 AK313461 BC042875 U49082 AF244548	-22244	+	DQ426874 NM_000172 NM_144499 X15088 BC095505 AF493908	-35860	+	BC042914 NM_004186 U33920	-72044	+	TSC_hg19_v1_chr3_+_50273632 BC012138	8653	+	AK055574 TSC_hg19_v1_chr3_+_50273635	8687	+	TSC_hg19_v1_chr3_+_50273646 NM_002070	8695	+	NM_006841|SLC38A3|10991|solute carrier family 38, member 3##AK299677|SLC38A3|10991|solute carrier family 38, member 3##BX537382|SLC38A3|10991|solute carrier family 38, member 3##AK293801|SLC38A3|10991|solute carrier family 38, member 3##AK313461|SLC38A3|10991|solute carrier family 38, member 3##BC042875|SLC38A3|10991|solute carrier family 38, member 3##U49082|SLC38A3|10991|solute carrier family 38, member 3##AF244548|SLC38A3|10991|solute carrier family 38, member 3##NM_000172|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##NM_144499|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##X15088|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##BC095505|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##AF493908|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##BC042914|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##NM_004186|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##U33920|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##BC012138|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AK055574|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##NM_002070|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	0.346013	CTCF.p2:-17:0.287
chr1	67677412	67677523	reg1005313.p1	12.471	+	AF461422 NM_144701	-45299	+	NM_001013674	-83248	-	TSC_hg19_v1_chr1_-_67520070 AK289800 NM_015139	-157414	-	NM_001559 U64198 TSC_hg19_v1_chr1_+_67773087	95614	+	AK294494 TSC_hg19_v1_chr1_+_67773565 AK316525	96096	+	CR457383 AB527591 CU675982 CU676556 CU677990 CU693242 EU831446 EU831638 EU831722 EU832650 EU832728 TSC_hg19_v1_chr1_-_67896065 BC003049 AK130606 BC002488 BC008045 BC017449 BC020555 BC026916 BC019273 AL080119 AF151813	218556	-	AF461422|IL23R|149233|interleukin 23 receptor##NM_144701|IL23R|149233|interleukin 23 receptor##NM_001013674|C1orf141|400757|chromosome 1 open reading frame 141##AK289800|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_015139|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_001559|IL12RB2|3595|interleukin 12 receptor, beta 2##U64198|IL12RB2|3595|interleukin 12 receptor, beta 2##AK294494|IL12RB2|3595|interleukin 12 receptor, beta 2##AK316525|IL12RB2|3595|interleukin 12 receptor, beta 2##CR457383|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831446|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831638|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831722|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832650|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832728|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC003049|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK130606|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC002488|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC008045|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC017449|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC020555|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC026916|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC019273|SERBP1|26135|SERPINE1 mRNA binding protein 1##AL080119|SERBP1|26135|SERPINE1 mRNA binding protein 1##AF151813|SERBP1|26135|SERPINE1 mRNA binding protein 1	0.917959	CTCF.p2:9:0.918
chr6	13909239	13909378	reg1007275.p1	12.471	+	BC008234 TSC_hg19_v1_chr6_-_13814790 BC016850 NM_001031713 AK024611	-94540	-	BC052781 TSC_hg19_v1_chr6_-_13711955	-197334	-	TSC_hg19_v1_chr6_-_13711730 AB055311 NM_005493	-197573	-	NM_001165034	15368	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	15858	+	NM_001165033 AK090576 AX746519	16135	+	BC008234|CCDC90A|63933|coiled-coil domain containing 90A##BC016850|CCDC90A|63933|coiled-coil domain containing 90A##NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A##AK024611|CCDC90A|63933|coiled-coil domain containing 90A##BC052781|RANBP9|10048|RAN binding protein 9##AB055311|RANBP9|10048|RAN binding protein 9##NM_005493|RANBP9|10048|RAN binding protein 9##NM_001165034|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182##NM_001165033|RNF182|221687|ring finger protein 182##AK090576|RNF182|221687|ring finger protein 182	0.093325	
chr6	41392340	41392460	reg1006099.p2	12.470	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-88834	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-137976	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-196332	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	121759	+	TSC_hg19_v1_chr6_+_41514342 BC052803	121937	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	213822	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	0.234382	CTCF.p2:6:0.234
chr9	132869540	132869660	reg1005854.p1	12.469	+	TSC_hg19_v1_chr9_+_132816199 AK026244 AK225456 BC030147 AF376725 AX776003 BC110518 AK293092 AB385490 AB046844	-53384	+	TSC_hg19_v1_chr9_+_132816196 BC143655	-53409	+	BC039728 NM_001136557 NM_001136558 NM_020960	-53616	+	AK024651 TSC_hg19_v1_chr9_+_132897386	27764	+	TSC_hg19_v1_chr9_+_132934685 BC004856 NM_014286 AF134479 AF186409 X84048 AB463656	65213	+	NM_001128826	93271	+	AK026244|GPR107|57720|G protein-coupled receptor 107##AK225456|GPR107|57720|G protein-coupled receptor 107##BC030147|GPR107|57720|G protein-coupled receptor 107##AF376725|GPR107|57720|G protein-coupled receptor 107##BC110518|GPR107|57720|G protein-coupled receptor 107##AK293092|GPR107|57720|G protein-coupled receptor 107##AB046844|GPR107|57720|G protein-coupled receptor 107##BC143655|GPR107|57720|G protein-coupled receptor 107##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107##AK024651|GPR107|57720|G protein-coupled receptor 107##BC004856|NCS1|23413|neuronal calcium sensor 1##NM_014286|NCS1|23413|neuronal calcium sensor 1##AF134479|NCS1|23413|neuronal calcium sensor 1##AF186409|NCS1|23413|neuronal calcium sensor 1##X84048|NCS1|23413|neuronal calcium sensor 1##NM_001128826|NCS1|23413|neuronal calcium sensor 1	0.991406	CTCF.p2:-22:0.991
chr12	31391848	31391973	reg1007908.p1	12.468	+	BC047317 BC050522 X99583 AK303139 TSC_hg19_v1_chr12_+_31226840 U33833 U75967 BC001591	-165037	+	TSC_hg19_v1_chr12_+_31226805 U75968 BC011264	-165102	+	TSC_hg19_v1_chr12_+_31226789 BC148224 BC111733 NM_004399 NM_030653 NM_152438 AK297607 BC050069	-165132	+	TSC_hg19_v1_chr12_-_31477084 AK294457	85177	-	BC071966 TSC_hg19_v1_chr12_-_31479052 BC004462 AK027736 AF087885 AK026932 AL157432	87148	-	TSC_hg19_v1_chr12_-_31479085 AF212220	87191	-	BC047317|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050522|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##X99583|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK303139|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U33833|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75967|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC001591|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75968|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC011264|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC148224|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_004399|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_030653|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_152438|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK297607|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050069|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK294457|FAM60A|58516|family with sequence similarity 60, member A##BC071966|FAM60A|58516|family with sequence similarity 60, member A##BC004462|FAM60A|58516|family with sequence similarity 60, member A##AF087885|FAM60A|58516|family with sequence similarity 60, member A##AK026932|FAM60A|58516|family with sequence similarity 60, member A##AL157432|FAM60A|58516|family with sequence similarity 60, member A##AF212220|FAM60A|58516|family with sequence similarity 60, member A	0.0	
chr2	100877284	100877418	reg1007251.p1	12.468	+	BC036895 TSC_hg19_v1_chr2_-_100759026 NM_002285	-118348	-	TSC_hg19_v1_chr2_-_100722359 AK297407 AK092327 AX747484	-154893	-	TSC_hg19_v1_chr2_-_100722267 AK308645	-155083	-	DQ020495 NM_198461	61843	-	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	156746	-	AB164464 NM_001011717	209592	+	BC036895|AFF3|3899|AF4/FMR2 family, member 3##NM_002285|AFF3|3899|AF4/FMR2 family, member 3##AK297407|AFF3|3899|AF4/FMR2 family, member 3##AK092327|AFF3|3899|AF4/FMR2 family, member 3##AK308645|AFF3|3899|AF4/FMR2 family, member 3##DQ020495|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##NM_198461|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S	0.642727	CTCF.p2:17:0.643
chr2	223573112	223573221	reg1006350.p1	12.468	+	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	-36757	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	-52372	-	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	-283859	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	152581	+	NM_080671 TSC_hg19_v1_chr2_+_223916907 DQ192293 AK313203 BC014429 AY065987	343731	+	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	893900	-	AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_080671|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##DQ192293|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AK313203|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##BC014429|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AY065987|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II	0.997862	CTCF.p2:-14:0.998
chr4	55549908	55550041	reg1007953.p1	12.468	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	-25840	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-454510	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-454694	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	441780	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	662442	+	TSC_hg19_v1_chr4_+_56212475 CU677982 CR457312	662510	+	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3##CR457312|SRD5A3|79644|steroid 5 alpha-reductase 3	0.997983	CTCF.p2:-1:0.998
chr8	12040272	12040379	reg1006112.p1	12.468	+	AY509884 NM_201402	-44057	-	BC110823 NM_001039615	-93479	+	DQ012022 NM_001037804 NM_001195257	-111070	-	AK309984 BC062615 BC072459 BC098427 BC048297 AK098138 AK308513 AK297741 AK308439 BC085016 NM_001083537 AK291001 AK298940	11262	-	DQ012022 NM_001037804 NM_001195257	135499	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	253518	-	AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##NM_201402|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC110823|ZNF705D|728957|zinc finger protein 705D##NM_001039615|ZNF705D|728957|zinc finger protein 705D##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##BC062615|FAM86B1|85002|family with sequence similarity 86, member B1##BC098427|FAM86B1|85002|family with sequence similarity 86, member B1##BC048297|FAM86B1|85002|family with sequence similarity 86, member B1##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##NM_001083537|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1	0.722243	CTCF.p2:-4:0.581
chr11	128502132	128502267	reg1007333.p1	12.466	+	BX640634 NM_001143820	-44747	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	-110065	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	-110236	-	TSC_hg19_v1_chr11_+_128563793 NM_001167681 NM_002017	61599	+	TSC_hg19_v1_chr11_+_128563966 AK313370	61762	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	61781	+	BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001167681|FLI1|2313|Friend leukemia virus integration 1##NM_002017|FLI1|2313|Friend leukemia virus integration 1##AK313370|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1	0.0	
chr12	70294525	70294669	reg1006511.p1	12.466	+	AK027671 BC015548 NM_001024647 AK027566	-121813	+	NM_175623 NM_175625 AJ312897 AJ312899 AJ312901	-161414	+	TSC_hg19_v1_chr12_+_70132676 AK314547 NM_022456 NM_175624 AJ312896 AJ312898 AJ312900 AK026201 AK225441 BC014553 BC059358	-161958	+	NM_014515 TSC_hg19_v1_chr12_+_70636809 AK315715 NM_001199302	342194	+	AK000662 TSC_hg19_v1_chr12_+_70637212 AF044215 BC011826 BC002597 AF161480	342638	+	AK307479 NM_001199303 AK095789	342914	+	AK027671|RAB3IP|117177|RAB3A interacting protein (rabin3)##BC015548|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_001024647|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK027566|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_175623|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_175625|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312897|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312899|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312901|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK314547|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_022456|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_175624|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312896|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312898|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312900|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK026201|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK225441|RAB3IP|117177|RAB3A interacting protein (rabin3)##BC014553|RAB3IP|117177|RAB3A interacting protein (rabin3)##BC059358|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_014515|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK315715|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##NM_001199302|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK000662|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AF044215|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##BC011826|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##BC002597|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AF161480|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK307479|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##NM_001199303|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK095789|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	0.997063	CTCF.p2:-11:0.997
chr19	917740	917889	reg1007547.p1	12.466	+	TSC_hg19_v1_chr19_+_917306 BC141812 NM_032551 AY253982 BC140825 AB051065 AF343725 AJ309020 AY029541 AY253981 BC111094 EU883577	-421	+	NM_138774 TSC_hg19_v1_chr19_-_913224	-4590	-	TSC_hg19_v1_chr19_-_913199 BC012775	-4617	-	TSC_hg19_v1_chr19_+_926038 AY845638 BC060828 NM_005224	8197	+	TSC_hg19_v1_chr19_+_984344 NM_024100 BC000040 BC001648 CU674808	66520	+	TSC_hg19_v1_chr19_+_1000312 AY507106 AY507107 NM_138690	82551	+	BC141812|KISS1R|84634|KISS1 receptor##NM_032551|KISS1R|84634|KISS1 receptor##AY253982|KISS1R|84634|KISS1 receptor##BC140825|KISS1R|84634|KISS1 receptor##AB051065|KISS1R|84634|KISS1 receptor##AF343725|KISS1R|84634|KISS1 receptor##AJ309020|KISS1R|84634|KISS1 receptor##AY029541|KISS1R|84634|KISS1 receptor##AY253981|KISS1R|84634|KISS1 receptor##EU883577|KISS1R|84634|KISS1 receptor##NM_138774|R3HDM4|91300|R3H domain containing 4##BC012775|R3HDM4|91300|R3H domain containing 4##AY845638|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC060828|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_005224|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_024100|WDR18|57418|WD repeat domain 18##BC000040|WDR18|57418|WD repeat domain 18##BC001648|WDR18|57418|WD repeat domain 18##AY507106|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##AY507107|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_138690|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B	0.095907	
chr3	66866668	66866796	reg1005971.p1	12.466	+	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	-315268	-	AF381545 BC140907 NM_015541 AY730707	-315880	-	TSC_hg19_v1_chr3_+_66444897 AB075504	-421773	+	NM_032505 AK096640 AK300397	181996	+	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	838330	-	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	838418	+	AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit	0.999471	CTCF.p2:35:0.999
chr16	28813944	28814061	reg1005164.p1	12.464	+	BC157849 AB527254 DQ891632 DQ894822 TSC_hg19_v1_chr16_+_28723065	-90980	+	BC107692 NM_001037808 NM_003752 TSC_hg19_v1_chr16_+_28722786 AK301183 NM_001099661 AK301233 AK304500 AK055366 AK299421 AK303790 BC001571 BC000533 AY762099 AK293264 AK000739 BC071705	-91183	+	AK292155 NM_001199142 BC157842	-114069	+	TSC_hg19_v1_chr16_+_28834364 AK289981	20363	+	TSC_hg19_v1_chr16_+_28834372 BC068012	20386	+	TSC_hg19_v1_chr16_+_28834434 AJ317970 AJ317971 AJ317972 AJ317973 AJ317974 NM_007245 NM_145714 NM_148414 NM_148415 NM_148416 BC136584 BC144269	20424	+	BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK289981|ATXN2L|11273|ataxin 2-like##BC068012|ATXN2L|11273|ataxin 2-like##AJ317970|ATXN2L|11273|ataxin 2-like##AJ317971|ATXN2L|11273|ataxin 2-like##AJ317972|ATXN2L|11273|ataxin 2-like##AJ317973|ATXN2L|11273|ataxin 2-like##AJ317974|ATXN2L|11273|ataxin 2-like##NM_007245|ATXN2L|11273|ataxin 2-like##NM_145714|ATXN2L|11273|ataxin 2-like##NM_148414|ATXN2L|11273|ataxin 2-like##NM_148415|ATXN2L|11273|ataxin 2-like##NM_148416|ATXN2L|11273|ataxin 2-like##BC136584|ATXN2L|11273|ataxin 2-like##BC144269|ATXN2L|11273|ataxin 2-like	0.999612	CTCF.p2:-4:1.000
chr4	79785690	79785831	reg1007153.p1	12.463	+	TSC_hg19_v1_chr4_+_79697552 AK292147 BC036021 DQ890994	-88137	+	NM_017593 NM_198892 TSC_hg19_v1_chr4_+_79697532	-88224	+	TSC_hg19_v1_chr4_+_79697501 AL137661	-88277	+	AK055774 BX648346 CU689134 AY424281 BC029604 TSC_hg19_v1_chr4_-_79860593 BC031256 BC047510 AK291232 NM_001040202 AX775925	74722	-	BC063623 BC080651 BC004552 NM_032693	461401	-	CU688758 DQ891321 DQ894505 BC058888 AK312768 BC029820 BC048274 X78712 NM_033214 AK292241 BC027598	543607	-	AK292147|BMP2K|55589|BMP2 inducible kinase##BC036021|BMP2K|55589|BMP2 inducible kinase##DQ890994|BMP2K|55589|BMP2 inducible kinase##NM_017593|BMP2K|55589|BMP2 inducible kinase##NM_198892|BMP2K|55589|BMP2 inducible kinase##AL137661|BMP2K|55589|BMP2 inducible kinase##AK055774|PAQR3|152559|progestin and adipoQ receptor family member III##BX648346|PAQR3|152559|progestin and adipoQ receptor family member III##AY424281|PAQR3|152559|progestin and adipoQ receptor family member III##BC029604|PAQR3|152559|progestin and adipoQ receptor family member III##BC031256|PAQR3|152559|progestin and adipoQ receptor family member III##BC047510|PAQR3|152559|progestin and adipoQ receptor family member III##AK291232|PAQR3|152559|progestin and adipoQ receptor family member III##NM_001040202|PAQR3|152559|progestin and adipoQ receptor family member III##AX775925|PAQR3|152559|progestin and adipoQ receptor family member III##BC063623|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC080651|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC004552|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##NM_032693|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##DQ891321|GK2|2712|glycerol kinase 2##DQ894505|GK2|2712|glycerol kinase 2##BC058888|GK2|2712|glycerol kinase 2##BC029820|GK2|2712|glycerol kinase 2##BC048274|GK2|2712|glycerol kinase 2##X78712|GK2|2712|glycerol kinase 2##NM_033214|GK2|2712|glycerol kinase 2##AK292241|GK2|2712|glycerol kinase 2##BC027598|GK2|2712|glycerol kinase 2	0.913229	CTCF.p2:2:0.913
chr16	76687468	76687577	reg1005814.p2	12.462	+	NM_138994 AK057327 BC017266	-343767	+	AB051550 NM_033401 TSC_hg19_v1_chr16_+_76311298	-376282	+	AK307901 NM_018975 TSC_hg19_v1_chr16_+_75681715 AK000669 BC022428 BC004465 BC005841 BC016739 BC078171 AF289599 AF250393 AB464292 CU678732 AF262988	-1005815	+	TSC_hg19_v1_chr16_+_77224857 BC024277 NM_014940	537320	+	AK023374 TSC_hg19_v1_chr16_+_77224865	537363	+	TSC_hg19_v1_chr16_+_77225092 AK023896 AK296467	537552	+	NM_138994|CNTNAP4|85445|contactin associated protein-like 4##AK057327|CNTNAP4|85445|contactin associated protein-like 4##BC017266|CNTNAP4|85445|contactin associated protein-like 4##AB051550|CNTNAP4|85445|contactin associated protein-like 4##NM_033401|CNTNAP4|85445|contactin associated protein-like 4##AK307901|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##NM_018975|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AK000669|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC022428|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC004465|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC005841|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC016739|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC078171|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF289599|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF250393|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF262988|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC024277|MON1B|22879|MON1 homolog B (yeast)##NM_014940|MON1B|22879|MON1 homolog B (yeast)##AK023374|MON1B|22879|MON1 homolog B (yeast)##AK023896|MON1B|22879|MON1 homolog B (yeast)##AK296467|MON1B|22879|MON1 homolog B (yeast)	0.736763	CTCF.p2:2:0.737
chr5	148822200	148822334	reg1008162.p1	12.462	+	TSC_hg19_v1_chr5_+_148786440 AK126481 CR933654 BX640700	-35785	+	AB590699 CR457192 BC113925 BC113946 AF152098 AF184969 AF218727 AY358931 AF110385 AF212311 NM_014443 TSC_hg19_v1_chr5_-_148758856	-63445	-	TSC_hg19_v1_chr5_+_148737613 AF451985 BC000014	-84644	+	AF218004 TSC_hg19_v1_chr5_-_148930935 AK303794 BC021971 BC025371 BC007246	108657	-	TSC_hg19_v1_chr5_-_148930950 AK294942	108699	-	TSC_hg19_v1_chr5_-_148931006 NM_001025105 NM_001892	108739	-	AK126481|MIR143HG|728264|MIR143 host gene (non-protein coding)##CR933654|MIR143HG|728264|MIR143 host gene (non-protein coding)##CR457192|IL17B|27190|interleukin 17B##BC113925|IL17B|27190|interleukin 17B##BC113946|IL17B|27190|interleukin 17B##AF152098|IL17B|27190|interleukin 17B##AF184969|IL17B|27190|interleukin 17B##AF218727|IL17B|27190|interleukin 17B##AY358931|IL17B|27190|interleukin 17B##AF110385|IL17B|27190|interleukin 17B##AF212311|IL17B|27190|interleukin 17B##NM_014443|IL17B|27190|interleukin 17B##AF451985|PCYOX1L|78991|prenylcysteine oxidase 1 like##BC000014|PCYOX1L|78991|prenylcysteine oxidase 1 like##AF218004|CSNK1A1|1452|casein kinase 1, alpha 1##AK303794|CSNK1A1|1452|casein kinase 1, alpha 1##BC021971|CSNK1A1|1452|casein kinase 1, alpha 1##BC025371|CSNK1A1|1452|casein kinase 1, alpha 1##BC007246|CSNK1A1|1452|casein kinase 1, alpha 1##AK294942|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001025105|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001892|CSNK1A1|1452|casein kinase 1, alpha 1	0.99839	CTCF.p2:3:0.998
chr10	96039978	96040091	reg1007087.p1	12.461	+	AK297779 AK289852 NM_001165979 AF170071	-191203	+	TSC_hg19_v1_chr10_+_95753696 AB040949 BC151854 NM_016341	-286320	+	TSC_hg19_v1_chr10_+_95653753 AK091309 AX746907 NM_001134658 NM_153226 BC036382 BC058549 BC143283 BC143284 BC104814 BC047102	-386294	+	AB077992 TSC_hg19_v1_chr10_-_96122697 BC049850 NM_022451 AK091246 AX746873 BC030999 AK292520	82642	-	NM_015188 TSC_hg19_v1_chr10_+_96162185	122152	+	TSC_hg19_v1_chr10_+_96162276 AB011180 AB449898	122287	+	AK297779|PLCE1|51196|phospholipase C, epsilon 1##AK289852|PLCE1|51196|phospholipase C, epsilon 1##NM_001165979|PLCE1|51196|phospholipase C, epsilon 1##AF170071|PLCE1|51196|phospholipase C, epsilon 1##AB040949|PLCE1|51196|phospholipase C, epsilon 1##BC151854|PLCE1|51196|phospholipase C, epsilon 1##NM_016341|PLCE1|51196|phospholipase C, epsilon 1##AK091309|SLC35G1|159371|solute carrier family 35, member G1##NM_001134658|SLC35G1|159371|solute carrier family 35, member G1##NM_153226|SLC35G1|159371|solute carrier family 35, member G1##BC036382|SLC35G1|159371|solute carrier family 35, member G1##BC143284|SLC35G1|159371|solute carrier family 35, member G1##BC104814|SLC35G1|159371|solute carrier family 35, member G1##BC047102|SLC35G1|159371|solute carrier family 35, member G1##AB077992|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##BC049850|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##NM_022451|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##AK091246|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##BC030999|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##AK292520|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##NM_015188|TBC1D12|23232|TBC1 domain family, member 12##AB011180|TBC1D12|23232|TBC1 domain family, member 12##AB449898|TBC1D12|23232|TBC1 domain family, member 12	0.99513	CTCF.p2:1:0.995
chr17	9306033	9306174	reg1004661.p1	12.460	+	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	-381136	+	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	-437122	-	AY725853 AF128881 NM_014308	-490287	-	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	173028	-	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	173103	-	NM_001080556 NM_145054 AK074435 AB065281 BC025392 AK094847 AK315679 CU692990	173874	+	NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8##NM_001080556|WDR16|146845|WD repeat domain 16##NM_145054|WDR16|146845|WD repeat domain 16##AK074435|WDR16|146845|WD repeat domain 16##AB065281|WDR16|146845|WD repeat domain 16##BC025392|WDR16|146845|WD repeat domain 16##AK094847|WDR16|146845|WD repeat domain 16##AK315679|WDR16|146845|WD repeat domain 16	0.47351	CTCF.p2:-1:0.474
chr11	119352200	119352322	reg1006016.p1	12.459	+	BC037832 NM_006288	-58018	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-58352	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	-99862	-	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	247121	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	647285	-	AK299472 TSC_hg19_v1_chr11_-_120008323	656011	-	BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29	0.994934	CTCF.p2:-10:0.995
chr5	7746333	7746490	reg1005565.p1	12.459	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	-350143	+	AK308405 NM_001171806 AK303516	-1000289	+	NM_001171805 NM_006999 AF089896 BC084567	-1031661	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	104848	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	122721	-	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	122848	+	NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase	0.961972	CTCF.p2:17:0.962
chr13	46895865	46896010	reg1007118.p1	12.458	+	TSC_hg19_v1_chr13_-_46756327 BC053839 M34426 BC010271 AK223305 AK093568 NM_002298	-139545	-	TSC_hg19_v1_chr13_-_46756297 BC007673 AB208984 AK312393	-139629	-	TSC_hg19_v1_chr13_-_46756291 J02923	-139645	-	AK300183 BC032311 BC043488 TSC_hg19_v1_chr13_-_46961376 AK307854	65408	-	TSC_hg19_v1_chr13_-_46961379 AK025215 AK293034	65447	-	NM_025113	65697	-	BC053839|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##M34426|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##BC010271|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AK223305|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##NM_002298|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##BC007673|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AB208984|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AK312393|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AK300183|KIAA0226L|80183|KIAA0226-like##BC032311|KIAA0226L|80183|KIAA0226-like##BC043488|KIAA0226L|80183|KIAA0226-like##AK307854|KIAA0226L|80183|KIAA0226-like##AK025215|KIAA0226L|80183|KIAA0226-like##AK293034|KIAA0226L|80183|KIAA0226-like##NM_025113|KIAA0226L|80183|KIAA0226-like	0.988866	CTCF.p2:8:0.989
chr11	9556777	9556892	reg1006529.p1	12.457	+	NM_003442 BC020219 AK313330 TSC_hg19_v1_chr11_+_9482560 AK291133 AK297214 BC014458	-74291	+	BC004388 TSC_hg19_v1_chr11_-_9482148 BC036621	-74706	-	AK312885 TSC_hg19_v1_chr11_+_9406199 AF098799 BC114929	-150614	+	TSC_hg19_v1_chr11_+_9595216 NM_003390 U10564 BC070052	38379	+	X62048 TSC_hg19_v1_chr11_+_9595313	38491	+	BC051831 TSC_hg19_v1_chr11_+_9595437	38599	+	NM_003442|ZNF143|7702|zinc finger protein 143##BC020219|ZNF143|7702|zinc finger protein 143##AK313330|ZNF143|7702|zinc finger protein 143##AK291133|ZNF143|7702|zinc finger protein 143##AK297214|ZNF143|7702|zinc finger protein 143##BC014458|ZNF143|7702|zinc finger protein 143##BC004388|LOC644656|644656|uncharacterized LOC644656##BC036621|LOC644656|644656|uncharacterized LOC644656##AK312885|IPO7|10527|importin 7##AF098799|IPO7|10527|importin 7##BC114929|IPO7|10527|importin 7##NM_003390|WEE1|7465|WEE1 homolog (S. pombe)##U10564|WEE1|7465|WEE1 homolog (S. pombe)##BC070052|WEE1|7465|WEE1 homolog (S. pombe)##X62048|WEE1|7465|WEE1 homolog (S. pombe)##BC051831|WEE1|7465|WEE1 homolog (S. pombe)	0.93817	CTCF.p2:-5:0.938
chr18	56737785	56737911	reg1006348.p1	12.457	+	TSC_hg19_v1_chr18_+_56531281 BC036366	-206499	+	TSC_hg19_v1_chr18_+_56530714 AB046849	-206993	+	NM_018181 AF295077 BC130618 BC130620	-207729	+	TSC_hg19_v1_chr18_+_56807119 AK314107 AF212233 AK311213 NM_033280 AK295346 AK307127 BC009703 CU679449	69299	+	TSC_hg19_v1_chr18_+_56887389 AK307264 BC004488 NM_001012512 NM_001012513 NM_002091 K02054 DQ893451 DQ896223 AB528662 AB102889 BT006803	149595	+	BC051901 AF115392 NM_013435 AB593018	202806	-	BC036366|ZNF532|55205|zinc finger protein 532##AB046849|ZNF532|55205|zinc finger protein 532##NM_018181|ZNF532|55205|zinc finger protein 532##AF295077|ZNF532|55205|zinc finger protein 532##BC130618|ZNF532|55205|zinc finger protein 532##BC130620|ZNF532|55205|zinc finger protein 532##AK314107|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AF212233|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##NM_033280|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK295346|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307127|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##BC009703|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307264|GRP|2922|gastrin-releasing peptide##BC004488|GRP|2922|gastrin-releasing peptide##NM_001012512|GRP|2922|gastrin-releasing peptide##NM_001012513|GRP|2922|gastrin-releasing peptide##NM_002091|GRP|2922|gastrin-releasing peptide##K02054|GRP|2922|gastrin-releasing peptide##DQ893451|GRP|2922|gastrin-releasing peptide##DQ896223|GRP|2922|gastrin-releasing peptide##AB102889|GRP|2922|gastrin-releasing peptide##BT006803|GRP|2922|gastrin-releasing peptide##BC051901|RAX|30062|retina and anterior neural fold homeobox##AF115392|RAX|30062|retina and anterior neural fold homeobox##NM_013435|RAX|30062|retina and anterior neural fold homeobox##AB593018|RAX|30062|retina and anterior neural fold homeobox	0.942223	CTCF.p2:2:0.942
chr14	23442911	23443025	reg1005045.p1	12.456	+	BX247981 TSC_hg19_v1_chr14_-_23426362	-16604	-	TSC_hg19_v1_chr14_-_23426300 BC002554 AK026016 AK057779 BX247995 BX248256 AK000431 BC001916 NM_001166269 NM_001166270 NM_017815	-16660	-	TSC_hg19_v1_chr14_-_23398605 AF167572 NM_001039619 NM_006109	-44336	-	AK025567 TSC_hg19_v1_chr14_-_23445979	2967	-	AK096128 NM_198086	3463	-	TSC_hg19_v1_chr14_-_23451806 BC034968 NM_032876	8807	-	BX247981|HAUS4|54930|HAUS augmin-like complex, subunit 4##BC002554|HAUS4|54930|HAUS augmin-like complex, subunit 4##AK026016|HAUS4|54930|HAUS augmin-like complex, subunit 4##AK057779|HAUS4|54930|HAUS augmin-like complex, subunit 4##BX247995|HAUS4|54930|HAUS augmin-like complex, subunit 4##BX248256|HAUS4|54930|HAUS augmin-like complex, subunit 4##AK000431|HAUS4|54930|HAUS augmin-like complex, subunit 4##BC001916|HAUS4|54930|HAUS augmin-like complex, subunit 4##NM_001166269|HAUS4|54930|HAUS augmin-like complex, subunit 4##NM_001166270|HAUS4|54930|HAUS augmin-like complex, subunit 4##NM_017815|HAUS4|54930|HAUS augmin-like complex, subunit 4##AF167572|PRMT5|10419|protein arginine methyltransferase 5##NM_001039619|PRMT5|10419|protein arginine methyltransferase 5##NM_006109|PRMT5|10419|protein arginine methyltransferase 5##AK025567|AJUBA|84962|ajuba LIM protein##AK096128|AJUBA|84962|ajuba LIM protein##NM_198086|AJUBA|84962|ajuba LIM protein##BC034968|AJUBA|84962|ajuba LIM protein##NM_032876|AJUBA|84962|ajuba LIM protein	0.928865	CTCF.p2:-6:0.929
chr6	111270992	111271151	reg1007691.p1	12.456	+	AK302761 NM_001634 TSC_hg19_v1_chr6_+_111195987 AK300330 AL832698 BX640599 NM_001033059 AJ420527 M21154	-75049	+	TSC_hg19_v1_chr6_-_111136673 BC024247	-134345	-	TSC_hg19_v1_chr6_-_111136507 AY028424	-134557	-	AF361492 AF361496 NM_138408 BC104655 TSC_hg19_v1_chr6_+_111279890	8759	+	BC011593 TSC_hg19_v1_chr6_+_111279945 AK057977 EF137904	8887	+	AK292165 TSC_hg19_v1_chr6_+_111303240 AK024740 AK301662 AL833613 BC005347 BC035314 NM_032194 CU690066	32203	+	AK302761|AMD1|262|adenosylmethionine decarboxylase 1##NM_001634|AMD1|262|adenosylmethionine decarboxylase 1##AK300330|AMD1|262|adenosylmethionine decarboxylase 1##AL832698|AMD1|262|adenosylmethionine decarboxylase 1##BX640599|AMD1|262|adenosylmethionine decarboxylase 1##NM_001033059|AMD1|262|adenosylmethionine decarboxylase 1##AJ420527|AMD1|262|adenosylmethionine decarboxylase 1##M21154|AMD1|262|adenosylmethionine decarboxylase 1##BC024247|CDK19|23097|cyclin-dependent kinase 19##AY028424|CDK19|23097|cyclin-dependent kinase 19##AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##BC011593|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AK057977|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##EF137904|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AK292165|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK024740|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK301662|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AL833613|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC005347|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC035314|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##NM_032194|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)	0.25493	CTCF.p2:18:0.255
chr2	69137048	69137168	reg1005051.p1	12.454	+	BC069080 BC101734 BC105063 AF101441 NM_014482	-38533	-	BC032222 NM_001166276 NM_014882 AK311669 TSC_hg19_v1_chr2_+_69002068 BC039591 AK297157 AK298669 D29642	-135083	+	NM_001007231 NM_001166277 AK297056 TSC_hg19_v1_chr2_+_68962066 AK310742 AK290396	-175035	+	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	42948	-	AB039886 AJ966789 NM_019617 AB590637 AY139184 AK098489 AY456961 BC059778 AY359050	64634	+	TSC_hg19_v1_chr2_+_69240310 NM_018153 NM_032208 NM_053034 AF279145 AK001463 AY928974 AY928975 AY928976 AY928977 AK223273 BC012074 AK309553 AF421380 AK292113 CU680200 EU832615 EU832687	103275	+	BC069080|BMP10|27302|bone morphogenetic protein 10##BC101734|BMP10|27302|bone morphogenetic protein 10##BC105063|BMP10|27302|bone morphogenetic protein 10##AF101441|BMP10|27302|bone morphogenetic protein 10##NM_014482|BMP10|27302|bone morphogenetic protein 10##BC032222|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166276|ARHGAP25|9938|Rho GTPase activating protein 25##NM_014882|ARHGAP25|9938|Rho GTPase activating protein 25##AK311669|ARHGAP25|9938|Rho GTPase activating protein 25##BC039591|ARHGAP25|9938|Rho GTPase activating protein 25##AK297157|ARHGAP25|9938|Rho GTPase activating protein 25##AK298669|ARHGAP25|9938|Rho GTPase activating protein 25##D29642|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25##AK297056|ARHGAP25|9938|Rho GTPase activating protein 25##AK310742|ARHGAP25|9938|Rho GTPase activating protein 25##AK290396|ARHGAP25|9938|Rho GTPase activating protein 25##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2##AB039886|GKN1|56287|gastrokine 1##AJ966789|GKN1|56287|gastrokine 1##NM_019617|GKN1|56287|gastrokine 1##AY139184|GKN1|56287|gastrokine 1##AK098489|GKN1|56287|gastrokine 1##AY456961|GKN1|56287|gastrokine 1##BC059778|GKN1|56287|gastrokine 1##AY359050|GKN1|56287|gastrokine 1##NM_018153|ANTXR1|84168|anthrax toxin receptor 1##NM_032208|ANTXR1|84168|anthrax toxin receptor 1##NM_053034|ANTXR1|84168|anthrax toxin receptor 1##AF279145|ANTXR1|84168|anthrax toxin receptor 1##AK001463|ANTXR1|84168|anthrax toxin receptor 1##AK223273|ANTXR1|84168|anthrax toxin receptor 1##BC012074|ANTXR1|84168|anthrax toxin receptor 1##AK309553|ANTXR1|84168|anthrax toxin receptor 1##AF421380|ANTXR1|84168|anthrax toxin receptor 1##AK292113|ANTXR1|84168|anthrax toxin receptor 1##EU832615|ANTXR1|84168|anthrax toxin receptor 1##EU832687|ANTXR1|84168|anthrax toxin receptor 1	0.362819	CTCF.p2:20:0.363
chr20	49604399	49604518	reg1006226.p1	12.453	+	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-29090	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-29395	-	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	-56735	-	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	35199	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	554681	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	554817	-	BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.958804	CTCF.p2:-18:0.959
chr7	7721247	7721383	reg1007241.p1	12.453	+	TSC_hg19_v1_chr7_+_7680382 AK295253	-40942	+	BT007320 AB464142 TSC_hg19_v1_chr7_-_7680067 L07493 BC005264 AK311842	-41228	-	TSC_hg19_v1_chr7_+_7606667 AK294561	-114629	+	BC009868 NM_002947	36922	-	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	287118	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	580401	-	AK295253|LOC729852|729852|uncharacterized LOC729852##BT007320|RPA3|6119|replication protein A3, 14kDa##L07493|RPA3|6119|replication protein A3, 14kDa##BC005264|RPA3|6119|replication protein A3, 14kDa##AK311842|RPA3|6119|replication protein A3, 14kDa##AK294561|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr11	71511524	71511657	reg1005882.p1	12.452	+	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	-12983	+	BC130498 BC130502 AB126080 NM_001005405	-217676	-	AB126079 BC137550 BC137566 NM_001012710	-234982	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	13316	-	AF529416 NM_001002035	32655	+	NM_001242853	77908	+	NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1##BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11##AB126079|KRTAP5-10|387273|keratin associated protein 5-10##BC137550|KRTAP5-10|387273|keratin associated protein 5-10##BC137566|KRTAP5-10|387273|keratin associated protein 5-10##NM_001012710|KRTAP5-10|387273|keratin associated protein 5-10##BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene##AF529416|DEFB108B|245911|defensin, beta 108B##NM_001002035|DEFB108B|245911|defensin, beta 108B##NM_001242853|LOC100129216|100129216|beta-defensin 131-like	1.428399	CTCF.p2:16:0.441	CTCF.p2:-21:0.987
chr1	161536089	161536204	reg1004633.p1	12.451	+	NM_001127593 NM_001127595 NM_001127596	-15734	-	BC036723 NM_000569 NM_001127592 AK302126	-16292	-	CU676090 CU689692 AK223268 TSC_hg19_v1_chr1_-_161519555 BC033678 AK223295 X52645 AB528616 CU691394	-16567	-	NM_201563 AK308168 AK307162 BC137397 BC137423 X17652 U90938 U90939 U90940 U90941 CU689254	15031	+	NM_001244753	65105	-	NM_000570	65606	-	NM_001127593|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_001127595|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_001127596|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##BC036723|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_000569|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_001127592|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK302126|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK223268|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##BC033678|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK223295|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##X52645|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_201563|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##AK308168|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##AK307162|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC137397|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC137423|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##X17652|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90938|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90939|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90940|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90941|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##NM_001244753|FCGR3B|2215|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)##NM_000570|FCGR3B|2215|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)	0.397108	CTCF.p2:0:0.397
chr7	29142290	29142418	reg1007859.p1	12.451	+	AK293803 NM_014817 TSC_hg19_v1_chr7_-_28998036	-144322	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	-144425	-	CU690330 TSC_hg19_v1_chr7_-_28997732	-144657	-	AF106704 TSC_hg19_v1_chr7_-_29186093 AF282617 AK225545 BC016838 AK075433 NM_019029 NM_031311	43759	-	TSC_hg19_v1_chr7_+_29234115 NM_004067	91769	+	U28926 AK313021 TSC_hg19_v1_chr7_+_29234428 BC112155 AK293959 AB529082 EU732759 EU732760 EU732761 EU732762 EU732763 EU732764 EU732765 EU732766	92087	+	NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats##AF106704|CPVL|54504|carboxypeptidase, vitellogenic-like##AF282617|CPVL|54504|carboxypeptidase, vitellogenic-like##AK225545|CPVL|54504|carboxypeptidase, vitellogenic-like##BC016838|CPVL|54504|carboxypeptidase, vitellogenic-like##AK075433|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_019029|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_031311|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_004067|CHN2|1124|chimerin (chimaerin) 2##U28926|CHN2|1124|chimerin (chimaerin) 2##AK313021|CHN2|1124|chimerin (chimaerin) 2##BC112155|CHN2|1124|chimerin (chimaerin) 2##AK293959|CHN2|1124|chimerin (chimaerin) 2##EU732759|CHN2|1124|chimerin (chimaerin) 2##EU732760|CHN2|1124|chimerin (chimaerin) 2##EU732761|CHN2|1124|chimerin (chimaerin) 2##EU732762|CHN2|1124|chimerin (chimaerin) 2##EU732763|CHN2|1124|chimerin (chimaerin) 2##EU732764|CHN2|1124|chimerin (chimaerin) 2##EU732765|CHN2|1124|chimerin (chimaerin) 2##EU732766|CHN2|1124|chimerin (chimaerin) 2	0.957326	CTCF.p2:9:0.957
chr8	131687863	131688003	reg1007917.p1	12.451	+	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	-231902	-	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-659050	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-659239	-	NM_001115	364901	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1228424	+	TSC_hg19_v1_chr8_+_132916379 BC108667	1228444	+	NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC108667|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.998103	CTCF.p2:0:0.998
chr17	19084934	19085083	reg1007686.p1	12.450	+	BC157869 NM_001129778	-54227	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-134722	-	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-176929	-	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	55700	+	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	180961	-	TSC_hg19_v1_chr17_+_19281077 NM_139032 NM_139033 BC007404 BC007992 U29725 AK295376	196182	+	BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1##NM_139032|MAPK7|5598|mitogen-activated protein kinase 7##NM_139033|MAPK7|5598|mitogen-activated protein kinase 7##BC007404|MAPK7|5598|mitogen-activated protein kinase 7##BC007992|MAPK7|5598|mitogen-activated protein kinase 7##U29725|MAPK7|5598|mitogen-activated protein kinase 7##AK295376|MAPK7|5598|mitogen-activated protein kinase 7	0.940264	CTCF.p2:-10:0.940
chr17	40219427	40219532	reg1005139.p1	12.450	+	NM_001242704	-29436	-	TSC_hg19_v1_chr17_+_40172124 AK027265 AK297975 AK054571 BC007316 BC007450	-47333	+	NM_001144927 NM_001144928 NM_001144929 NM_017595 TSC_hg19_v1_chr17_+_40172107	-47381	+	BC014949 AK296840 AK300900 AK021416 AK225549 NM_024119	45239	-	TSC_hg19_v1_chr17_-_40273386 AB527835 AF029777 BC032743 BC105977 BC039907 NM_021078	53870	-	NM_033194 BC093991 BC093993 AK130947	55322	+	NM_001242704|ZNF385C|201181|zinc finger protein 385C##AK027265|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK297975|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK054571|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007316|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007450|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144927|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144928|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144929|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_017595|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC014949|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK296840|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK300900|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK021416|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK225549|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_024119|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AF029777|KAT2A|2648|K(lysine) acetyltransferase 2A##BC032743|KAT2A|2648|K(lysine) acetyltransferase 2A##BC105977|KAT2A|2648|K(lysine) acetyltransferase 2A##BC039907|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_021078|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_033194|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093991|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093993|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##AK130947|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9	0.990674	CTCF.p2:4:0.991
chr19	41768274	41768401	reg1005376.p2	12.450	+	TSC_hg19_v1_chr19_+_41725293 AK310881 AB385214 DQ894117	-43049	+	TSC_hg19_v1_chr19_+_41725261 S65125 X57019	-43076	+	TSC_hg19_v1_chr19_+_41725146 M76125	-43191	+	TSC_hg19_v1_chr19_+_41768461 NM_144732 AK225850 AK023006 AK308078	130	+	TSC_hg19_v1_chr19_+_41770226 NM_007040 AJ007509	1812	+	TSC_hg19_v1_chr19_+_41770281 AK022863 AK127057 AK291762 AK308156	1940	+	AK310881|AXL|558|AXL receptor tyrosine kinase##DQ894117|AXL|558|AXL receptor tyrosine kinase##S65125|AXL|558|AXL receptor tyrosine kinase##X57019|AXL|558|AXL receptor tyrosine kinase##M76125|AXL|558|AXL receptor tyrosine kinase##NM_144732|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK225850|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK023006|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK308078|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##NM_007040|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AJ007509|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK022863|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK127057|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK291762|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK308156|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	0.548986	CTCF.p2:0:0.549
chr3	141173872	141173998	reg1006638.p1	12.450	+	AK311479 TSC_hg19_v1_chr3_+_141105293	-68647	+	TSC_hg19_v1_chr3_+_141087345 AK311501	-86578	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	-130879	+	TSC_hg19_v1_chr3_+_141205882 AK292016 AK301015 AF115573 D78155 D82880 NM_006506	31936	+	TSC_hg19_v1_chr3_+_141457045 NM_001201370 NM_014245 NM_183237	283134	+	TSC_hg19_v1_chr3_+_141457129 AK311982	283185	+	AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK292016|RASA2|5922|RAS p21 protein activator 2##AK301015|RASA2|5922|RAS p21 protein activator 2##AF115573|RASA2|5922|RAS p21 protein activator 2##D78155|RASA2|5922|RAS p21 protein activator 2##D82880|RASA2|5922|RAS p21 protein activator 2##NM_006506|RASA2|5922|RAS p21 protein activator 2##NM_001201370|RNF7|9616|ring finger protein 7##NM_014245|RNF7|9616|ring finger protein 7##NM_183237|RNF7|9616|ring finger protein 7##AK311982|RNF7|9616|ring finger protein 7	0.065667	
chr5	35089940	35090061	reg1005353.p1	12.450	+	NM_031900	-41761	-	TSC_hg19_v1_chr5_+_34929697 AY177688 AY258422 BC065745 NM_001012339 NM_194283	-160308	+	AK303311 TSC_hg19_v1_chr5_+_34915820 AK001962 BC006014 BC001546 NM_018321 AK289610 BX648902 DQ892108 DQ895302 AF347667 AY364243 AY364244	-174188	+	NM_001204314 NM_001204315 NM_001204316 NM_001204317 NM_001204318	28223	-	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	140577	-	NM_000949	140822	-	NM_031900|AGXT2|64902|alanine--glyoxylate aminotransferase 2##AY177688|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##AY258422|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##BC065745|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_001012339|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_194283|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##AK303311|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AK001962|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##BC006014|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##BC001546|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##NM_018321|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AK289610|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##BX648902|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##DQ892108|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##DQ895302|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AF347667|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AY364243|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AY364244|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##NM_001204314|PRLR|5618|prolactin receptor##NM_001204315|PRLR|5618|prolactin receptor##NM_001204316|PRLR|5618|prolactin receptor##NM_001204317|PRLR|5618|prolactin receptor##NM_001204318|PRLR|5618|prolactin receptor##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##NM_000949|PRLR|5618|prolactin receptor	0.022006	
chr1	88646334	88646456	reg1006038.p1	12.449	+	TSC_hg19_v1_chr1_+_87797426 BC065818	-848980	+	TSC_hg19_v1_chr1_+_87797312 AY321514	-849070	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	-851714	+	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	503700	+	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	710816	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	710878	-	BC065818|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB	0.99841	CTCF.p2:-6:0.998
chr10	65479864	65479989	reg1006829.p1	12.448	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-198685	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-198764	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-198811	+	NM_178011 BX640611 AY358315 BC111492	3205889	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	3945470	-	AF091606 AK313882 NM_013266	3976011	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.993519	CTCF.p2:6:0.994
chr2	119639244	119639377	reg1007656.p1	12.448	+	NM_001426	-33552	-	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-793247	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-867577	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	60510	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	277094	-	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	342075	+	NM_001426|EN1|2019|engrailed homeobox 1##AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase	0.990205	CTCF.p2:-4:0.990
chr1	15426977	15427114	reg1007579.p1	12.447	+	AY505122 NM_001017999	-154631	+	AY505121 NM_001018001	-170750	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	-176326	+	AK292184 NM_001136216 NM_001136217 TSC_hg19_v1_chr1_+_15479047	51986	+	AK129922 TSC_hg19_v1_chr1_+_15479310	52259	+	TSC_hg19_v1_chr1_+_15480249 AK001061 NM_001136218 NM_018022 BC000593 BC005177 AK098467	53203	+	AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AK292184|TMEM51|55092|transmembrane protein 51##NM_001136216|TMEM51|55092|transmembrane protein 51##NM_001136217|TMEM51|55092|transmembrane protein 51##AK129922|TMEM51|55092|transmembrane protein 51##AK001061|TMEM51|55092|transmembrane protein 51##NM_001136218|TMEM51|55092|transmembrane protein 51##NM_018022|TMEM51|55092|transmembrane protein 51##BC000593|TMEM51|55092|transmembrane protein 51##BC005177|TMEM51|55092|transmembrane protein 51##AK098467|TMEM51|55092|transmembrane protein 51	0.0	
chr19	4139830	4139944	reg1005886.p1	12.447	+	TSC_hg19_v1_chr19_-_4124145 BC000471 NM_030662	-15754	-	AB463893 DQ893601 DQ895060 L11285 BC018645 TSC_hg19_v1_chr19_-_4124114 BX538081	-15895	-	TSC_hg19_v1_chr19_-_4103205 AK093125	-36675	-	TSC_hg19_v1_chr19_+_4153636 AK313099 AB050902 AK172839 NM_032607 AB073612 BC101504 BC143609 BC143610 BC101508 EU446882	13780	+	TSC_hg19_v1_chr19_-_4182561 DQ896358 EU176413 AB528632 CR457200 CU678868 BC005026 BC000090 BC004218 AK299420 BC028220 AK293348 AK315048 AK301247 AK074810 AK225567 AF233396 NM_001193285 NM_016539	42658	-	NM_133475	43463	+	BC000471|MAP2K2|5605|mitogen-activated protein kinase kinase 2##NM_030662|MAP2K2|5605|mitogen-activated protein kinase kinase 2##DQ893601|MAP2K2|5605|mitogen-activated protein kinase kinase 2##DQ895060|MAP2K2|5605|mitogen-activated protein kinase kinase 2##L11285|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BC018645|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BX538081|MAP2K2|5605|mitogen-activated protein kinase kinase 2##AK093125|MAP2K2|5605|mitogen-activated protein kinase kinase 2##AK313099|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB050902|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AK172839|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##NM_032607|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB073612|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101504|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143609|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143610|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101508|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##EU446882|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##DQ896358|SIRT6|51548|sirtuin 6##EU176413|SIRT6|51548|sirtuin 6##CR457200|SIRT6|51548|sirtuin 6##BC005026|SIRT6|51548|sirtuin 6##BC004218|SIRT6|51548|sirtuin 6##AK299420|SIRT6|51548|sirtuin 6##BC028220|SIRT6|51548|sirtuin 6##AK293348|SIRT6|51548|sirtuin 6##AK315048|SIRT6|51548|sirtuin 6##AK301247|SIRT6|51548|sirtuin 6##AK074810|SIRT6|51548|sirtuin 6##AK225567|SIRT6|51548|sirtuin 6##AF233396|SIRT6|51548|sirtuin 6##NM_001193285|SIRT6|51548|sirtuin 6##NM_016539|SIRT6|51548|sirtuin 6##NM_133475|ANKRD24|170961|ankyrin repeat domain 24	0.991838	CTCF.p2:8:0.992
chr13	52575399	52575533	reg1008585.p1	12.446	+	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	-139272	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	-197191	-	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-416731	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	10084	-	TSC_hg19_v1_chr13_+_52586546 NM_001004127 BC142998 AK296747 AK092428 AX747540 BC108677 BC111022 AK025456 BC143059 BC150316	11069	+	BC073862 D87455 NM_021645	23286	+	AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)##NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)	0.078289	
chr14	50346563	50346691	reg1007010.p1	12.446	+	TSC_hg19_v1_chr14_-_50329567 X02067	-17031	-	TSC_hg19_v1_chr14_-_50319530 AK295010 AK293236 BC006001 BC056687 NM_004713	-27094	-	TSC_hg19_v1_chr14_-_50319497 AK304695 AK308537	-27131	-	TSC_hg19_v1_chr14_+_50359731 NM_001663	13103	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	13191	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	13206	+	X02067|RN7SL2|378706|RNA, 7SL, cytoplasmic 2##AK295010|NEMF|9147|nuclear export mediator factor##AK293236|NEMF|9147|nuclear export mediator factor##BC006001|NEMF|9147|nuclear export mediator factor##BC056687|NEMF|9147|nuclear export mediator factor##NM_004713|NEMF|9147|nuclear export mediator factor##AK304695|NEMF|9147|nuclear export mediator factor##AK308537|NEMF|9147|nuclear export mediator factor##NM_001663|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6	0.242849	CTCF.p2:-4:0.243
chr18	9969	10150	reg1026615.p2	12.446	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr18_+_158556 NM_001037334 NM_005151 AK297605 AK315438 BC003556 AK095516	148471	+	TSC_hg19_v1_chr18_+_158587 U30888 AB528508 DQ890594 DQ893762 CU678498 BT007183	148583	+	TSC_hg19_v1_chr18_-_268046 AY573302 AY573303 CU679685 DQ892768 EU176747 AK225709 L36529 AK314755 AK225067 BC010381 NM_005131	257974	-	NM_001037334|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##NM_005151|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AK297605|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AK315438|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##BC003556|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AK095516|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##U30888|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##DQ890594|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##DQ893762|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##BT007183|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AY573302|THOC1|9984|THO complex 1##AY573303|THOC1|9984|THO complex 1##DQ892768|THOC1|9984|THO complex 1##EU176747|THOC1|9984|THO complex 1##AK225709|THOC1|9984|THO complex 1##L36529|THOC1|9984|THO complex 1##AK314755|THOC1|9984|THO complex 1##AK225067|THOC1|9984|THO complex 1##BC010381|THOC1|9984|THO complex 1##NM_005131|THOC1|9984|THO complex 1	0.0	
chr6	136638290	136638410	reg1005990.p1	12.446	+	BC132780 BC144281 BC144282 BC144299 TSC_hg19_v1_chr6_-_136610938 BC047887 BC056894 D79986 NM_001077440 NM_001077441 NM_014739	-27390	-	BC078160 BC063846 TSC_hg19_v1_chr6_-_136610926 BX649160 BC016682	-27440	-	TSC_hg19_v1_chr6_-_136571414 AK292303 BC063688 AK125758 NM_001099286 NM_138419	-66921	-	AK299355 NM_001198615	149662	-	AK295749 AK294461 AK296556 AK311227 NM_001198608 NM_001198609 NM_001198611	208864	-	AK316529 AK307873 TSC_hg19_v1_chr6_-_136847721	209320	-	BC132780|BCLAF1|9774|BCL2-associated transcription factor 1##BC144281|BCLAF1|9774|BCL2-associated transcription factor 1##BC144282|BCLAF1|9774|BCL2-associated transcription factor 1##BC144299|BCLAF1|9774|BCL2-associated transcription factor 1##BC047887|BCLAF1|9774|BCL2-associated transcription factor 1##BC056894|BCLAF1|9774|BCL2-associated transcription factor 1##D79986|BCLAF1|9774|BCL2-associated transcription factor 1##NM_001077440|BCLAF1|9774|BCL2-associated transcription factor 1##NM_001077441|BCLAF1|9774|BCL2-associated transcription factor 1##NM_014739|BCLAF1|9774|BCL2-associated transcription factor 1##BC078160|BCLAF1|9774|BCL2-associated transcription factor 1##BC063846|BCLAF1|9774|BCL2-associated transcription factor 1##BX649160|BCLAF1|9774|BCL2-associated transcription factor 1##BC016682|BCLAF1|9774|BCL2-associated transcription factor 1##AK292303|FAM54A|113115|family with sequence similarity 54, member A##BC063688|FAM54A|113115|family with sequence similarity 54, member A##AK125758|FAM54A|113115|family with sequence similarity 54, member A##NM_001099286|FAM54A|113115|family with sequence similarity 54, member A##NM_138419|FAM54A|113115|family with sequence similarity 54, member A##AK299355|MAP7|9053|microtubule-associated protein 7##NM_001198615|MAP7|9053|microtubule-associated protein 7##AK295749|MAP7|9053|microtubule-associated protein 7##AK294461|MAP7|9053|microtubule-associated protein 7##AK296556|MAP7|9053|microtubule-associated protein 7##AK311227|MAP7|9053|microtubule-associated protein 7##NM_001198608|MAP7|9053|microtubule-associated protein 7##NM_001198609|MAP7|9053|microtubule-associated protein 7##NM_001198611|MAP7|9053|microtubule-associated protein 7##AK316529|MAP7|9053|microtubule-associated protein 7##AK307873|MAP7|9053|microtubule-associated protein 7	0.952179	CTCF.p2:11:0.952
chr8	22941797	22941934	reg1007289.p1	12.446	+	TSC_hg19_v1_chr8_-_22926545 AF192548 AF016266 AF016268 AF153687 AK291216 AF012535 AF016849 AY358277 BX538104 AK298602 BC001281 NM_003842 NM_147187	-15271	-	AB451272 AB451399 AF012628 AF018657 AF018658 AF020501 AF022386 CR541898 AB385139 TSC_hg19_v1_chr8_-_22926429	-15446	-	TSC_hg19_v1_chr8_+_22857415 AK292863 AY009093	-84428	+	NM_003841 AK298664 BC017852 TSC_hg19_v1_chr8_+_22960433 AK313213 AK298718 AF012536 AY358281 AF016267 AF033854 AF014794 BC125041 BC125042 AF020502 AF012629 CR541857	18615	+	AF023849 AF021232 AF021233 AF029761 AY358285 BC052270 AK313528 NM_003840 TSC_hg19_v1_chr8_-_23021544	79630	-	FJ795027 AB590225 BT006906 CU680426 DQ891791 DQ894973 JF729355 U90875 TSC_hg19_v1_chr8_-_23082598 AK291299 BC012866	140747	-	AF192548|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016266|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016268|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF153687|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK291216|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012535|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016849|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AY358277|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BX538104|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK298602|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BC001281|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003842|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_147187|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AB451272|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AB451399|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012628|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018657|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018658|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF020501|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF022386|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##CR541898|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK292863|RHOBTB2|23221|Rho-related BTB domain containing 2##AY009093|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_003841|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298664|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC017852|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK313213|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298718|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012536|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AY358281|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF016267|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF033854|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF014794|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125041|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125042|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF020502|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012629|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##CR541857|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF023849|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF021232|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF021233|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF029761|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AY358285|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##BC052270|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AK313528|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##NM_003840|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##FJ795027|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BT006906|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ891791|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ894973|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##JF729355|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##U90875|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##AK291299|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BC012866|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a	0.994501	CTCF.p2:-23:0.995
chr10	91323746	91323879	reg1007376.p1	12.445	+	CR936657 AK127303 NM_213606	-28501	-	U34605 TSC_hg19_v1_chr10_+_91174502 AK312358 AK293346	-149324	+	TSC_hg19_v1_chr10_+_91174324 NM_012420 BC025786	-149469	+	AF355198 AY027662 AY027663 NM_138316 NM_148978	79826	-	TSC_hg19_v1_chr10_-_91404973 AK125428	81131	-	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	81512	-	CR936657|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##AK127303|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##NM_213606|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##U34605|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK312358|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK293346|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##NM_012420|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##BC025786|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AF355198|PANK1|53354|pantothenate kinase 1##AY027662|PANK1|53354|pantothenate kinase 1##AY027663|PANK1|53354|pantothenate kinase 1##NM_138316|PANK1|53354|pantothenate kinase 1##NM_148978|PANK1|53354|pantothenate kinase 1##AK125428|PANK1|53354|pantothenate kinase 1##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1	0.945836	CTCF.p2:-2:0.946
chr1	107973398	107973537	reg1005965.p2	12.445	+	AB023193 TSC_hg19_v1_chr1_+_107683657	-289863	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-290725	+	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	-374102	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	257657	-	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	534133	-	AJ619961 NM_213651 AK292567	761929	-	AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.956059	CTCF.p2:-8:0.956
chr3	98292380	98292512	reg1006793.p1	12.445	+	AK313375 BC101779 BC101781 BC069437 CU686810 NM_005290	-41637	+	TSC_hg19_v1_chr3_-_98241835 NM_001040181 NM_001040182 NM_001040183 NM_001040199 NM_001040200 NM_019895	-50580	-	TSC_hg19_v1_chr3_-_98241770 BC013610 AK075367	-50681	-	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	19973	-	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	158799	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	159141	+	AK313375|GPR15|2838|G protein-coupled receptor 15##BC101779|GPR15|2838|G protein-coupled receptor 15##BC101781|GPR15|2838|G protein-coupled receptor 15##BC069437|GPR15|2838|G protein-coupled receptor 15##NM_005290|GPR15|2838|G protein-coupled receptor 15##NM_001040181|CLDND1|56650|claudin domain containing 1##NM_001040182|CLDND1|56650|claudin domain containing 1##NM_001040183|CLDND1|56650|claudin domain containing 1##NM_001040199|CLDND1|56650|claudin domain containing 1##NM_001040200|CLDND1|56650|claudin domain containing 1##NM_019895|CLDND1|56650|claudin domain containing 1##BC013610|CLDND1|56650|claudin domain containing 1##AK075367|CLDND1|56650|claudin domain containing 1##AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6	0.693266	CTCF.p2:23:0.693
chr6	109156553	109156672	reg1005988.p1	12.445	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	-274355	+	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	-274537	+	TSC_hg19_v1_chr6_+_108881027 NM_201559 BC020227 BC021224	-275589	+	TSC_hg19_v1_chr6_+_109169624 AK294574 NM_032131 AK292499 BC030603	13009	+	AF033121 NM_001199934	173578	-	TSC_hg19_v1_chr6_-_109330747 AF033120	174104	-	AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3##BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##NM_201559|FOXO3|2309|forkhead box O3##BC020227|FOXO3|2309|forkhead box O3##BC021224|FOXO3|2309|forkhead box O3##AK294574|ARMC2|84071|armadillo repeat containing 2##NM_032131|ARMC2|84071|armadillo repeat containing 2##AK292499|ARMC2|84071|armadillo repeat containing 2##BC030603|ARMC2|84071|armadillo repeat containing 2##AF033121|SESN1|27244|sestrin 1##NM_001199934|SESN1|27244|sestrin 1##AF033120|SESN1|27244|sestrin 1	0.999803	CTCF.p2:15:1.000
chr8	60964802	60964951	reg1006510.p2	12.445	+	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	-933204	-	NM_003580 TSC_hg19_v1_chr8_-_59572413	-1392465	-	BC041124 TSC_hg19_v1_chr8_-_59572386	-1392490	-	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	229045	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	464564	+	AK297576 TSC_hg19_v1_chr8_+_61429494	464618	+	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC041124|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family##AK297576|RAB2A|5862|RAB2A, member RAS oncogene family	0.999797	CTCF.p2:-10:1.000
chr13	28558526	28558649	reg1005765.p2	12.444	+	TSC_hg19_v1_chr13_-_28543453 Y13709	-15124	-	TSC_hg19_v1_chr13_-_28543325 BC014461 NM_001265	-15279	-	CU677005 AB463470 DQ893626 EU176674 U51096 TSC_hg19_v1_chr13_-_28543282	-15375	-	NM_001105577	4186	-	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	116100	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	154079	+	Y13709|CDX2|1045|caudal type homeobox 2##BC014461|CDX2|1045|caudal type homeobox 2##NM_001265|CDX2|1045|caudal type homeobox 2##DQ893626|CDX2|1045|caudal type homeobox 2##EU176674|CDX2|1045|caudal type homeobox 2##U51096|CDX2|1045|caudal type homeobox 2##NM_001105577|PRHOXNB|646625|parahox cluster neighbor##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)	0.999765	CTCF.p2:0:1.000
chr4	187508707	187508834	reg1007597.p1	12.444	+	EU432127 AB464620 HQ258378 BC074946 BC074947 NM_005958 U14108 TSC_hg19_v1_chr4_-_187476657 BC126297 BC126299	-32151	-	TSC_hg19_v1_chr4_+_187187342 AK313195 BC029374 BC119014 BC122863 M13142 AF045649	-321391	+	NM_000128 BC020617	-321649	+	TSC_hg19_v1_chr4_-_187527219 BC172774	18512	-	TSC_hg19_v1_chr4_-_187644994 NM_005245 X87241	136221	-	TSC_hg19_v1_chr4_-_187647851 AK307938	139035	-	EU432127|MTNR1A|4543|melatonin receptor 1A##HQ258378|MTNR1A|4543|melatonin receptor 1A##BC074946|MTNR1A|4543|melatonin receptor 1A##BC074947|MTNR1A|4543|melatonin receptor 1A##NM_005958|MTNR1A|4543|melatonin receptor 1A##U14108|MTNR1A|4543|melatonin receptor 1A##BC126297|MTNR1A|4543|melatonin receptor 1A##BC126299|MTNR1A|4543|melatonin receptor 1A##AK313195|F11|2160|coagulation factor XI##BC029374|F11|2160|coagulation factor XI##BC119014|F11|2160|coagulation factor XI##BC122863|F11|2160|coagulation factor XI##M13142|F11|2160|coagulation factor XI##AF045649|F11|2160|coagulation factor XI##NM_000128|F11|2160|coagulation factor XI##BC020617|F11|2160|coagulation factor XI##NM_005245|FAT1|2195|FAT tumor suppressor homolog 1 (Drosophila)##X87241|FAT1|2195|FAT tumor suppressor homolog 1 (Drosophila)	0.999754	CTCF.p2:-8:1.000
chr12	15429153	15429299	reg1007381.p1	12.443	+	AK311016 BC007997 AK295343 AK313881 NM_001190726 NM_032918	-54876	-	NM_006205 DQ980604 D45399	-303260	+	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	-314678	-	NM_002848 NM_030667 TSC_hg19_v1_chr12_+_15475264 AB209729	46034	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	46325	+	NM_030668 NM_030669 NM_030670 NM_030671 AF152378 AF187042 AF187043 AF187044	270055	+	AK311016|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##BC007997|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK295343|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK313881|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_001190726|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_032918|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AB209729|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	0.998927	CTCF.p2:-19:0.999
chr21	37582056	37582167	reg1005669.p1	12.443	+	AJ237839 NM_005128	-45273	+	TSC_hg19_v1_chr21_-_37528616 AB004851 BC037580 BC047014	-53480	-	AB041012 NM_001236 AB124847 TSC_hg19_v1_chr21_+_37507383 AK223429 BC002812 AB004854 CR541709	-74762	+	TSC_hg19_v1_chr21_+_37692548 BC058002 NM_015358 AK295133 BC007311 D50926 BC094779 BC132731 BC144116 AK292957 AB489143	110408	+	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	175579	+	BC012126 NM_012130 AY355349	256620	-	AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2##AB004851|LOC100506428|100506428|uncharacterized LOC100506428##BC037580|LOC100506428|100506428|uncharacterized LOC100506428##BC047014|LOC100506428|100506428|uncharacterized LOC100506428##AB041012|CBR3|874|carbonyl reductase 3##NM_001236|CBR3|874|carbonyl reductase 3##AB124847|CBR3|874|carbonyl reductase 3##AK223429|CBR3|874|carbonyl reductase 3##BC002812|CBR3|874|carbonyl reductase 3##AB004854|CBR3|874|carbonyl reductase 3##CR541709|CBR3|874|carbonyl reductase 3##BC058002|MORC3|23515|MORC family CW-type zinc finger 3##NM_015358|MORC3|23515|MORC family CW-type zinc finger 3##AK295133|MORC3|23515|MORC family CW-type zinc finger 3##BC007311|MORC3|23515|MORC family CW-type zinc finger 3##D50926|MORC3|23515|MORC family CW-type zinc finger 3##BC094779|MORC3|23515|MORC family CW-type zinc finger 3##BC132731|MORC3|23515|MORC family CW-type zinc finger 3##BC144116|MORC3|23515|MORC family CW-type zinc finger 3##AK292957|MORC3|23515|MORC family CW-type zinc finger 3##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14	0.960025	CTCF.p2:5:0.960
chrX	12719886	12720018	reg1005374.p1	12.443	+	AB002314 NM_014728 AK289694	-563362	+	NM_006800 AK025642	-942205	+	NM_001193270 AK300814	-943235	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	89545	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	89616	+	AK313858 BC033651 NM_016562 AF240467 AF245702	165246	+	AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7	0.99696	CTCF.p2:24:0.997
chr1	226735505	226735626	reg1005879.p1	12.442	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-139762	-	AK303340 M32721 TSC_hg19_v1_chr1_-_226595791	-139775	-	BC037545 TSC_hg19_v1_chr1_-_226595774 BC008660 BC014206	-139788	-	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	936	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	1052	+	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	191373	-	NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##AK303340|PARP1|142|poly (ADP-ribose) polymerase 1##M32721|PARP1|142|poly (ADP-ribose) polymerase 1##BC037545|PARP1|142|poly (ADP-ribose) polymerase 1##BC008660|PARP1|142|poly (ADP-ribose) polymerase 1##BC014206|PARP1|142|poly (ADP-ribose) polymerase 1##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B	0.065647	
chr12	50172042	50172168	reg1008015.p1	12.442	+	TSC_hg19_v1_chr12_+_50156978 AK026605	-15077	+	BC036203 TSC_hg19_v1_chr12_+_50135987	-36134	+	NM_001098576 AK124849	-36513	+	TSC_hg19_v1_chr12_-_50222197 NM_001037806	50094	-	CU690986 BC053560 BC040957 AK292194 NM_181708	64784	-	CU674012 AB463040 TSC_hg19_v1_chr12_-_50297671 AB023167 BC000051 AK290031 AF190461 NM_012306	125562	-	AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##BC036203|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##NM_001098576|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK124849|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##NM_001037806|NCKAP5L|57701|NCK-associated protein 5-like##BC053560|BCDIN3D|144233|BCDIN3 domain containing##BC040957|BCDIN3D|144233|BCDIN3 domain containing##AK292194|BCDIN3D|144233|BCDIN3 domain containing##NM_181708|BCDIN3D|144233|BCDIN3 domain containing##AB023167|FAIM2|23017|Fas apoptotic inhibitory molecule 2##BC000051|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AK290031|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AF190461|FAIM2|23017|Fas apoptotic inhibitory molecule 2##NM_012306|FAIM2|23017|Fas apoptotic inhibitory molecule 2	1.335182	CTCF.p2:8:0.981	CTCF.p2:39:0.354
chr6	127741728	127741856	reg1007420.p1	12.442	+	TSC_hg19_v1_chr6_-_127664710 AL834469 BC003549 AF220192 NM_001002030 NM_001105544 NM_001105545 NM_018479	-77070	-	TSC_hg19_v1_chr6_+_127664573 AK055024	-77231	+	TSC_hg19_v1_chr6_-_127664513 AK303812	-77269	-	NM_014702	38742	-	NM_001012279	98707	-	AK303850 BC062712 NM_001010905	156526	+	AL834469|ECHDC1|55862|enoyl CoA hydratase domain containing 1##BC003549|ECHDC1|55862|enoyl CoA hydratase domain containing 1##AF220192|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001002030|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001105544|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001105545|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_018479|ECHDC1|55862|enoyl CoA hydratase domain containing 1##AK303812|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_014702|KIAA0408|9729|KIAA0408##NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174##AK303850|C6orf58|352999|chromosome 6 open reading frame 58##BC062712|C6orf58|352999|chromosome 6 open reading frame 58##NM_001010905|C6orf58|352999|chromosome 6 open reading frame 58	0.17151	
chr17	7766126	7766231	reg1004613.p1	12.441	+	TSC_hg19_v1_chr17_+_7761320 BC060779 AK289520	-4833	+	BC033861 NM_032356 BC051846 TSC_hg19_v1_chr17_-_7761246	-4970	-	AK057061 NM_144607	-5115	+	TSC_hg19_v1_chr17_+_7788113 NM_001005271	21933	+	TSC_hg19_v1_chr17_+_7792039 AF006515 NM_001005273 NM_005852 U91543	25923	+	TSC_hg19_v1_chr17_+_7812703 AK096555	46582	+	BC060779|CYB5D1|124637|cytochrome b5 domain containing 1##AK289520|CYB5D1|124637|cytochrome b5 domain containing 1##BC033861|LSMD1|84316|LSM domain containing 1##NM_032356|LSMD1|84316|LSM domain containing 1##BC051846|LSMD1|84316|LSM domain containing 1##AK057061|CYB5D1|124637|cytochrome b5 domain containing 1##NM_144607|CYB5D1|124637|cytochrome b5 domain containing 1##NM_001005271|CHD3|1107|chromodomain helicase DNA binding protein 3##NM_001005273|CHD3|1107|chromodomain helicase DNA binding protein 3##NM_005852|CHD3|1107|chromodomain helicase DNA binding protein 3##U91543|CHD3|1107|chromodomain helicase DNA binding protein 3##AK096555|CHD3|1107|chromodomain helicase DNA binding protein 3	0.99758	CTCF.p2:-29:0.998
chr11	87836965	87837133	reg1005314.p1	12.440	+	AK024853 TSC_hg19_v1_chr11_+_87032449	-804607	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	-1088071	+	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	-1170661	-	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	71543	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	233818	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	233853	-	AK024853|TMEM135|65084|transmembrane protein 135##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C	1.466527	CTCF.p2:58:0.558	CTCF.p2:-73:0.909
chr12	116070277	116070427	reg1007148.p1	12.440	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-948212	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1224134	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1226428	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	644598	-	TSC_hg19_v1_chr12_-_116715263 AY338463	644808	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	900877	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.995839	CTCF.p2:18:0.996
chr2	233157464	233157595	reg1008157.p1	12.440	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-331169	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	-366496	-	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-506413	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	85854	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	114047	+	AK313163 NM_001631 BC132678 M31008 M15694	163341	+	AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal	0.998167	CTCF.p2:-8:0.998
chr11	6272494	6272640	reg1007086.p1	12.439	+	NM_001037329 AK122736	-12242	+	TSC_hg19_v1_chr11_-_6255892 AK056468 NM_001098794 NM_032127	-16646	-	TSC_hg19_v1_chr11_-_6255873 AL136723	-16691	-	NM_176875 D13305 S70057 L07746 AK292064 AK226020 BC000740 AK314266 AB527993 AF239668 Y13464 DQ890577 DQ893737 AF441129 AY029770 AY322551 BT006789 L04473 L08112	8463	+	DQ892300 DQ895499 BC038387 TSC_hg19_v1_chr11_-_6341732 BC011585 NM_145040 AF339881	69166	-	TSC_hg19_v1_chr11_+_6411681 NM_000543 NM_001007593 AB209775 AK292388 X59960 BC041164 M59916 AY649987 HQ132745 HQ132746 HQ132747 HQ132748	139165	+	NM_001037329|CNGA4|1262|cyclic nucleotide gated channel alpha 4##AK122736|CNGA4|1262|cyclic nucleotide gated channel alpha 4##AK056468|FAM160A2|84067|family with sequence similarity 160, member A2##NM_001098794|FAM160A2|84067|family with sequence similarity 160, member A2##NM_032127|FAM160A2|84067|family with sequence similarity 160, member A2##AL136723|FAM160A2|84067|family with sequence similarity 160, member A2##NM_176875|CCKBR|887|cholecystokinin B receptor##D13305|CCKBR|887|cholecystokinin B receptor##S70057|CCKBR|887|cholecystokinin B receptor##L07746|CCKBR|887|cholecystokinin B receptor##AK292064|CCKBR|887|cholecystokinin B receptor##AK226020|CCKBR|887|cholecystokinin B receptor##BC000740|CCKBR|887|cholecystokinin B receptor##AK314266|CCKBR|887|cholecystokinin B receptor##AF239668|CCKBR|887|cholecystokinin B receptor##DQ890577|CCKBR|887|cholecystokinin B receptor##DQ893737|CCKBR|887|cholecystokinin B receptor##AF441129|CCKBR|887|cholecystokinin B receptor##AY029770|CCKBR|887|cholecystokinin B receptor##AY322551|CCKBR|887|cholecystokinin B receptor##BT006789|CCKBR|887|cholecystokinin B receptor##L04473|CCKBR|887|cholecystokinin B receptor##L08112|CCKBR|887|cholecystokinin B receptor##DQ892300|PRKCDBP|112464|protein kinase C, delta binding protein##DQ895499|PRKCDBP|112464|protein kinase C, delta binding protein##BC038387|PRKCDBP|112464|protein kinase C, delta binding protein##BC011585|PRKCDBP|112464|protein kinase C, delta binding protein##NM_145040|PRKCDBP|112464|protein kinase C, delta binding protein##AF339881|PRKCDBP|112464|protein kinase C, delta binding protein##NM_000543|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##NM_001007593|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AB209775|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK292388|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##X59960|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##BC041164|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##M59916|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AY649987|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132745|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132746|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132747|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132748|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal	0.760509	CTCF.p2:-13:0.761
chr13	20756536	20756647	reg1005729.p2	12.439	+	NM_021954	-21409	-	TSC_hg19_v1_chr13_+_20532911 AJ224901 BX647944 NM_001190965	-223626	+	TSC_hg19_v1_chr13_+_20532881 AK226118 AK289741	-223707	+	BC017048 BC071703 TSC_hg19_v1_chr13_-_20767078 AK225966	10467	-	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	10520	-	NM_006783	48780	-	NM_021954|GJA3|2700|gap junction protein, alpha 3, 46kDa##AJ224901|ZMYM2|7750|zinc finger, MYM-type 2##BX647944|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190965|ZMYM2|7750|zinc finger, MYM-type 2##AK226118|ZMYM2|7750|zinc finger, MYM-type 2##AK289741|ZMYM2|7750|zinc finger, MYM-type 2##BC017048|GJB2|2706|gap junction protein, beta 2, 26kDa##BC071703|GJB2|2706|gap junction protein, beta 2, 26kDa##AK225966|GJB2|2706|gap junction protein, beta 2, 26kDa##AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa	0.981718	CTCF.p2:-7:0.982
chr19	2019717	2019843	reg1005416.p2	12.439	+	TSC_hg19_v1_chr19_-_2015708 AB527352 AF355797 NM_017797 AK225831	-4110	-	TSC_hg19_v1_chr19_+_1941192 BC018693 BC018699	-78592	+	TSC_hg19_v1_chr19_+_1941164 NM_001319	-78617	+	AL137615 TSC_hg19_v1_chr19_-_2039474 AK024347 AK097012	19721	-	TSC_hg19_v1_chr19_-_2041865 AK092536	22116	-	TSC_hg19_v1_chr19_-_2042036 AK001730	22270	-	AF355797|BTBD2|55643|BTB (POZ) domain containing 2##NM_017797|BTBD2|55643|BTB (POZ) domain containing 2##AK225831|BTBD2|55643|BTB (POZ) domain containing 2##BC018693|CSNK1G2|1455|casein kinase 1, gamma 2##BC018699|CSNK1G2|1455|casein kinase 1, gamma 2##NM_001319|CSNK1G2|1455|casein kinase 1, gamma 2##AL137615|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK024347|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK097012|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK092536|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK001730|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2	0.364462	CTCF.p2:-16:0.364
chr5	131574079	131574201	reg1003248.p1	12.439	+	TSC_hg19_v1_chr5_-_131563545 AY358970 BC025960 BC035813 BX647924 NM_001017974 NM_001142598 NM_001142599	-10622	-	NM_001017973 NM_004199 BC017062	-11197	-	M11220 NM_000758 BC113924 BC113999 BC108724 M11734 M10663 AY720441 AB591004 AF510855	-164615	+	TSC_hg19_v1_chr5_+_131593340 BC016765 NM_001131027 NM_003687 AF154335	19213	+	TSC_hg19_v1_chr5_+_131593377 AK313508 AF153882	19241	+	AK225407 X93510 TSC_hg19_v1_chr5_+_131593388 BC003096 AB528934 BT007019 CU677715	19267	+	AY358970|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC025960|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC035813|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BX647924|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001017974|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142598|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142599|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001017973|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_004199|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC017062|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##M11220|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_000758|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113924|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113999|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC108724|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M11734|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M10663|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AY720441|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AF510855|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC016765|PDLIM4|8572|PDZ and LIM domain 4##NM_001131027|PDLIM4|8572|PDZ and LIM domain 4##NM_003687|PDLIM4|8572|PDZ and LIM domain 4##AF154335|PDLIM4|8572|PDZ and LIM domain 4##AK313508|PDLIM4|8572|PDZ and LIM domain 4##AF153882|PDLIM4|8572|PDZ and LIM domain 4##AK225407|PDLIM4|8572|PDZ and LIM domain 4##X93510|PDLIM4|8572|PDZ and LIM domain 4##BC003096|PDLIM4|8572|PDZ and LIM domain 4##BT007019|PDLIM4|8572|PDZ and LIM domain 4	0.963443	CTCF.p2:-8:0.963
chr12	860498	860624	reg1003069.p1	12.437	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-87846	-	TSC_hg19_v1_chr12_-_752800 AK298043	-107742	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-108383	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	1595	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	2195	+	BC013629 TSC_hg19_v1_chr12_+_1017145	156521	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.046585	
chr15	81773035	81773175	reg1005320.p1	12.436	+	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	-106620	-	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	-156611	-	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	-183801	+	AK094145 TSC_hg19_v1_chr15_-_82336883	563778	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	565261	-	AB095929 BC111545 BC036211 TSC_hg19_v1_chr15_-_82338485	565371	-	NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3##AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)##AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)##BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)##BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)	0.99907	CTCF.p2:-11:0.999
chr17	48559970	48560118	reg1006028.p1	12.436	+	TSC_hg19_v1_chr17_+_48556220 AK022105 AK293814 AK297655 BC050538	-3812	+	TSC_hg19_v1_chr17_+_48556216 AK002026 NM_018346 AK222472	-3846	+	CU690332 BC036360 AF371328 BC073974 NM_001267 TSC_hg19_v1_chr17_-_48546242 AK292177	-13824	-	AK303041 NM_032133 TSC_hg19_v1_chr17_+_48585809 BC036358	25772	+	TSC_hg19_v1_chr17_+_48585945 BC028393 AB083068 AK314052 AL832225	25914	+	TSC_hg19_v1_chr17_+_48610049 NM_017957	50003	+	AK022105|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK293814|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK297655|RSAD1|55316|radical S-adenosyl methionine domain containing 1##BC050538|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK002026|RSAD1|55316|radical S-adenosyl methionine domain containing 1##NM_018346|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK222472|RSAD1|55316|radical S-adenosyl methionine domain containing 1##BC036360|CHAD|1101|chondroadherin##AF371328|CHAD|1101|chondroadherin##BC073974|CHAD|1101|chondroadherin##NM_001267|CHAD|1101|chondroadherin##AK292177|CHAD|1101|chondroadherin##AK303041|MYCBPAP|84073|MYCBP associated protein##NM_032133|MYCBPAP|84073|MYCBP associated protein##BC036358|MYCBPAP|84073|MYCBP associated protein##BC028393|MYCBPAP|84073|MYCBP associated protein##AB083068|MYCBPAP|84073|MYCBP associated protein##AK314052|MYCBPAP|84073|MYCBP associated protein##AL832225|MYCBPAP|84073|MYCBP associated protein##NM_017957|EPN3|55040|epsin 3	0.535185	CTCF.p2:-41:0.535
chr17	10549860	10549986	reg1007741.p1	12.434	+	NM_001100112 BC093082 AK299440 AK300702 AK308102 BX510904 NM_017534	-96946	-	AK310004 NM_005963	-128065	-	AF111783 NM_017533	-177048	-	NM_002470 TSC_hg19_v1_chr17_-_10560627	10704	-	TSC_hg19_v1_chr17_-_10600869 DQ891605 DQ894798 AF026852 AF183424 BC015504 AK098826 AK315595 AK074588 NM_004589	50930	-	NM_020233 BC070155 AB073393 AK292629 BC001294	51025	+	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult##NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult##AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_002470|MYH3|4621|myosin, heavy chain 3, skeletal muscle, embryonic##DQ891605|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##DQ894798|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF026852|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF183424|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##BC015504|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK098826|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK315595|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK074588|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_004589|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_020233|C17orf48|56985|chromosome 17 open reading frame 48##BC070155|C17orf48|56985|chromosome 17 open reading frame 48##AB073393|C17orf48|56985|chromosome 17 open reading frame 48##AK292629|C17orf48|56985|chromosome 17 open reading frame 48##BC001294|C17orf48|56985|chromosome 17 open reading frame 48	0.957133	CTCF.p2:-4:0.957
chr12	122232178	122232309	reg1005077.p1	12.433	+	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	-669	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	-81499	+	BC057760 NM_173855	-124684	-	TSC_hg19_v1_chr12_-_122240852 AK311480	8614	-	TSC_hg19_v1_chr12_+_122242580 NM_015048 JF813787	10368	+	CU692906 DQ892664 DQ896049 BC024287 BC014790 X72389 TSC_hg19_v1_chr12_-_122296766 AK290826 NM_002150	64450	-	AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##NM_015048|SETD1B|23067|SET domain containing 1B##JF813787|SETD1B|23067|SET domain containing 1B##DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	1.153822	CTCF.p2:3:0.907	CTCF.p2:76:0.247
chr5	7816493	7816622	reg1005673.p2	12.433	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	-420289	+	AK308405 NM_001171806 AK303516	-1070435	+	NM_001171805 NM_006999 AF089896 BC084567	-1101807	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	34702	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	52575	-	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	52702	+	NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase	0.933271	CTCF.p2:13:0.933
chr3	150583191	150583322	reg1004803.p1	12.432	+	TSC_hg19_v1_chr3_-_150481278 U76248 NM_005067	-102134	-	TSC_hg19_v1_chr3_-_150480936 BC013082	-102326	-	TSC_hg19_v1_chr3_-_150480902 AK223565	-102357	-	AF388366 AF388368 NM_052995	78766	-	AF482697 NM_001195794 NM_174878	107529	-	TSC_hg19_v1_chr3_+_150803504 AK128165	220249	+	U76248|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##NM_005067|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##BC013082|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##AK223565|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##AF388366|CLRN1|7401|clarin 1##AF388368|CLRN1|7401|clarin 1##NM_052995|CLRN1|7401|clarin 1##AF482697|CLRN1|7401|clarin 1##NM_001195794|CLRN1|7401|clarin 1##NM_174878|CLRN1|7401|clarin 1##AK128165|MED12L|116931|mediator complex subunit 12-like	0.989288	CTCF.p2:5:0.989
chr3	171284732	171284868	reg1005761.p2	12.432	+	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-106729	-	NM_000340	-540033	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-540267	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	243455	-	NM_001164436 AK026825	276348	+	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	472615	+	AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B	0.950164	CTCF.p2:13:0.950
chr14	76120592	76120714	reg1005989.p1	12.431	+	AK297002 NM_001195283	-48849	+	NM_017791 AY260572 AY260577 BC019087 AK000378	-75688	+	TSC_hg19_v1_chr14_+_75988840 D42106	-131801	+	AF134159 TSC_hg19_v1_chr14_-_76127220 AK311764 AL136658 AF136971 AF161406 BC002444	6543	-	TSC_hg19_v1_chr14_-_76127535 BX248022 NM_007176	6902	-	NM_015072 TSC_hg19_v1_chr14_+_76127588 BC110652	6916	+	AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##AF134159|C14orf1|11161|chromosome 14 open reading frame 1##AK311764|C14orf1|11161|chromosome 14 open reading frame 1##AL136658|C14orf1|11161|chromosome 14 open reading frame 1##AF136971|C14orf1|11161|chromosome 14 open reading frame 1##AF161406|C14orf1|11161|chromosome 14 open reading frame 1##BC002444|C14orf1|11161|chromosome 14 open reading frame 1##BX248022|C14orf1|11161|chromosome 14 open reading frame 1##NM_007176|C14orf1|11161|chromosome 14 open reading frame 1##NM_015072|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BC110652|TTLL5|23093|tubulin tyrosine ligase-like family, member 5	0.983426	CTCF.p2:14:0.965
chr19	34992560	34992666	reg1004780.p1	12.431	+	TSC_hg19_v1_chr19_+_34972869 NM_001080436	-19741	+	TSC_hg19_v1_chr19_+_34919329 DQ893423 EU176757 CU678406 AF110957 BT009781 CR456756	-73272	+	TSC_hg19_v1_chr19_+_34919307 AF090384 AL136905 U35832	-73304	+	BC093909 BC093935 NM_001025591	92876	-	TSC_hg19_v1_chr19_+_35168582 AL834318 NM_001012320 NM_018443 AK074901 AF155656 AK315241 AF190157 AK297551 AK131278 BC024176 AF265236 AF326206	176036	+	TSC_hg19_v1_chr19_+_35225102 BC043228	232485	+	NM_001080436|WTIP|126374|Wilms tumor 1 interacting protein##DQ893423|UBA2|10054|ubiquitin-like modifier activating enzyme 2##EU176757|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AF110957|UBA2|10054|ubiquitin-like modifier activating enzyme 2##BT009781|UBA2|10054|ubiquitin-like modifier activating enzyme 2##CR456756|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AF090384|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AL136905|UBA2|10054|ubiquitin-like modifier activating enzyme 2##U35832|UBA2|10054|ubiquitin-like modifier activating enzyme 2##BC093909|SCGBL|284402|secretoglobin-like##BC093935|SCGBL|284402|secretoglobin-like##NM_001025591|SCGBL|284402|secretoglobin-like##AL834318|ZNF302|55900|zinc finger protein 302##NM_001012320|ZNF302|55900|zinc finger protein 302##NM_018443|ZNF302|55900|zinc finger protein 302##AK074901|ZNF302|55900|zinc finger protein 302##AF155656|ZNF302|55900|zinc finger protein 302##AK315241|ZNF302|55900|zinc finger protein 302##AF190157|ZNF302|55900|zinc finger protein 302##AK131278|ZNF302|55900|zinc finger protein 302##BC024176|ZNF302|55900|zinc finger protein 302##AF265236|ZNF302|55900|zinc finger protein 302##AF326206|ZNF302|55900|zinc finger protein 302##BC043228|ZNF181|339318|zinc finger protein 181	1.458851	CTCF.p2:-33:0.464	CTCF.p2:33:0.995
chr20	43013130	43013251	reg1007233.p1	12.431	+	TSC_hg19_v1_chr20_+_42984338 AY680696 AY680697 AY680698 NM_001030003 NM_001030004 NM_175914 FJ608822 HQ692868	-28799	+	TSC_hg19_v1_chr20_+_42984088 AK096973	-29097	+	NM_178491	-47565	+	TSC_hg19_v1_chr20_-_43024303 AF143870	11134	-	TSC_hg19_v1_chr20_+_43029888 Z49825 NM_000457 NM_178849 NM_178850	16704	+	X87872 X87870 TSC_hg19_v1_chr20_+_43029954 X87871	16756	+	AY680696|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AY680697|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AY680698|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_001030003|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_001030004|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_175914|HNF4A|3172|hepatocyte nuclear factor 4, alpha##FJ608822|HNF4A|3172|hepatocyte nuclear factor 4, alpha##HQ692868|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AK096973|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_178491|R3HDML|140902|R3H domain containing-like##Z49825|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_000457|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_178849|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_178850|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87872|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87870|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87871|HNF4A|3172|hepatocyte nuclear factor 4, alpha	0.835877	CTCF.p2:1:0.836
chr11	132948586	132948723	reg1008557.p1	12.429	+	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-135049	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-135640	-	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1167315	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	453660	-	AF521713 AK098717 NM_174927 BC058039	766727	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	878228	-	AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B	0.696815	CTCF.p2:-2:0.697
chr19	57918033	57918168	reg1007805.p1	12.429	+	TSC_hg19_v1_chr19_+_57901344 AK299069 EU446719	-16702	+	TSC_hg19_v1_chr19_+_57901221 BC030788 NM_001172773 NM_152909 AK057494	-16849	+	AF058918 AF291676 AK055662 NM_173631 BC008889 BC032809 BC042681 AL832545 BC064426 AK291464	-43184	+	TSC_hg19_v1_chr19_+_57922528 NM_006959 AK127948 AK098183	4431	+	TSC_hg19_v1_chr19_+_57946689 NM_001023561 AK122794	28589	+	NM_020633	50006	-	AK299069|ZNF548|147694|zinc finger protein 548##EU446719|ZNF17|7565|zinc finger protein 17##BC030788|ZNF548|147694|zinc finger protein 548##NM_001172773|ZNF548|147694|zinc finger protein 548##NM_152909|ZNF548|147694|zinc finger protein 548##AK057494|ZNF548|147694|zinc finger protein 548##AF058918|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##AF291676|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##AK055662|ZNF547|284306|zinc finger protein 547##NM_173631|ZNF547|284306|zinc finger protein 547##BC008889|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##BC032809|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##BC042681|ZNF547|284306|zinc finger protein 547##AL832545|ZNF547|284306|zinc finger protein 547##AK291464|ZNF547|284306|zinc finger protein 547##NM_006959|ZNF17|7565|zinc finger protein 17##AK127948|ZNF17|7565|zinc finger protein 17##AK098183|ZNF17|7565|zinc finger protein 17##NM_001023561|ZNF749|388567|zinc finger protein 749##AK122794|ZNF749|388567|zinc finger protein 749##NM_020633|VN1R1|57191|vomeronasal 1 receptor 1	0.984567	CTCF.p2:-2:0.985
chr16	88503897	88504000	reg1004649.p1	12.428	+	NM_001127464	-10070	+	AK094158 NM_001173543	-500325	+	AK315535 NM_001173542	-510472	+	TSC_hg19_v1_chr16_+_88519687 AF488691	15757	+	TSC_hg19_v1_chr16_+_88519921 NM_153813	16017	+	TSC_hg19_v1_chr16_+_88636807 NM_144604	132784	+	NM_001127464|ZNF469|84627|zinc finger protein 469##AK094158|BANP|54971|BTG3 associated nuclear protein##NM_001173543|BANP|54971|BTG3 associated nuclear protein##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein##AF488691|ZFPM1|161882|zinc finger protein, multitype 1##NM_153813|ZFPM1|161882|zinc finger protein, multitype 1##NM_144604|ZC3H18|124245|zinc finger CCCH-type containing 18	0.979104	CTCF.p2:-3:0.979
chr10	121303082	121303205	reg1004771.p3	12.427	+	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	-953	-	NM_002925	-7099	-	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-335882	+	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	52965	-	TSC_hg19_v1_chr10_-_121356475 AL833106 AK290695	53357	-	TSC_hg19_v1_chr10_-_121356537 BC030025 NM_001033925 NM_003252	53409	-	BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AL833106|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290695|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##BC030025|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##NM_001033925|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##NM_003252|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.572367	CTCF.p2:3:0.572
chr19	56845007	56845123	reg1005751.p1	12.427	+	BC002636 NM_024303 AK098700	-105397	-	NM_001080456	-140645	-	AF188492 AF188493 NM_001145546 NM_033106	-157677	+	BX647919 AK097128 TSC_hg19_v1_chr19_+_56879704 AL833621 BC064603 BC089419	34651	+	TSC_hg19_v1_chr19_-_56904904 AK055489 NM_144690 AK299036 BC056238 AK316028	59827	-	NM_001159860	70317	+	BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_001080456|ZSCAN5B|342933|zinc finger and SCAN domain containing 5B##AF188492|GALP|85569|galanin-like peptide##AF188493|GALP|85569|galanin-like peptide##NM_001145546|GALP|85569|galanin-like peptide##NM_033106|GALP|85569|galanin-like peptide##BX647919|ZNF542|147947|zinc finger protein 542##AK097128|ZNF542|147947|zinc finger protein 542##AL833621|ZNF542|147947|zinc finger protein 542##BC064603|ZNF542|147947|zinc finger protein 542##BC089419|ZNF542|147947|zinc finger protein 542##AK055489|ZNF582|147948|zinc finger protein 582##NM_144690|ZNF582|147948|zinc finger protein 582##AK299036|ZNF582|147948|zinc finger protein 582##BC056238|ZNF582|147948|zinc finger protein 582##AK316028|ZNF582|147948|zinc finger protein 582##NM_001159860|ZNF583|147949|zinc finger protein 583	1.15777	CTCF.p2:11:0.917	CTCF.p2:97:0.241
chr21	30749022	30749158	reg1006113.p2	12.426	+	AF026199 NM_206866	-77354	+	TSC_hg19_v1_chr21_+_30671242 AK313791 BC063307	-77849	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	-77870	+	L19058 NM_000830 NM_175611 AK296404 BC028238	563199	-	BC101503 BC101505 NM_012131 AY358094	789916	-	AB590283 CU676754 DQ892002 DQ895192 BC058004 AY358707 BC020866 AK223512 AK022269 NM_199328	839265	-	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AK313791|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC063307|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##L19058|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_000830|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_175611|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##AK296404|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC028238|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC101503|CLDN17|26285|claudin 17##BC101505|CLDN17|26285|claudin 17##NM_012131|CLDN17|26285|claudin 17##AY358094|CLDN17|26285|claudin 17##DQ892002|CLDN8|9073|claudin 8##DQ895192|CLDN8|9073|claudin 8##BC058004|CLDN8|9073|claudin 8##AY358707|CLDN8|9073|claudin 8##BC020866|CLDN8|9073|claudin 8##AK223512|CLDN8|9073|claudin 8##AK022269|CLDN8|9073|claudin 8##NM_199328|CLDN8|9073|claudin 8	0.997081	CTCF.p2:-2:0.997
chr4	164476158	164476304	reg1007145.p1	12.425	+	TSC_hg19_v1_chr4_+_164415868 BC011842	-60358	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-60389	+	TSC_hg19_v1_chr4_+_164415817 BC017418 AK298235	-60415	+	AB463878 AK000675 AK301408 NM_017923	58484	-	NM_012403	642631	-	AK289711 NM_001166373	828175	-	BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##BC017418|C4orf43|55319|chromosome 4 open reading frame 43##AK298235|C4orf43|55319|chromosome 4 open reading frame 43##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	0.410876	CTCF.p2:-23:0.411
chr6	6557306	6557450	reg1008078.p1	12.425	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-236468	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-236493	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-549681	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	31572	+	BC039678 TSC_hg19_v1_chr6_+_6725205	167783	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	550448	+	NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1	0.7218	CTCF.p2:-5:0.722
chr1	150533505	150533655	reg1002581.p2	12.423	+	TSC_hg19_v1_chr1_+_150521883 AF289612 NM_019032 NM_025008	-11726	+	AK292435 TSC_hg19_v1_chr1_+_150480584 AK301369 AK316390 AK302279 U65932 DQ893011 DQ896257	-52946	+	NM_001202858 NM_004425 NM_022664 TSC_hg19_v1_chr1_+_150480582 AK097205 AK097046 BC023505 DQ010946 DQ112074 U68186 U68187	-53046	+	AB385142 AF203373 BT006640 CU677857 DQ890628 DQ893795 FJ917536 TSC_hg19_v1_chr1_-_150552076 AF118124 BC017197 BC071897 L08246 AK300499 BC107735 AK294462	18460	-	TSC_hg19_v1_chr1_-_150552077 AK316267 AK297217 AK304775 AK312508	18501	-	TSC_hg19_v1_chr1_-_150552129 NM_001197320 NM_021960 NM_182763	18590	-	AF289612|ADAMTSL4|54507|ADAMTS-like 4##NM_019032|ADAMTSL4|54507|ADAMTS-like 4##NM_025008|ADAMTSL4|54507|ADAMTS-like 4##AK292435|ECM1|1893|extracellular matrix protein 1##AK301369|ECM1|1893|extracellular matrix protein 1##AK316390|ECM1|1893|extracellular matrix protein 1##AK302279|ECM1|1893|extracellular matrix protein 1##U65932|ECM1|1893|extracellular matrix protein 1##DQ893011|ECM1|1893|extracellular matrix protein 1##DQ896257|ECM1|1893|extracellular matrix protein 1##NM_001202858|ECM1|1893|extracellular matrix protein 1##NM_004425|ECM1|1893|extracellular matrix protein 1##NM_022664|ECM1|1893|extracellular matrix protein 1##AK097205|ECM1|1893|extracellular matrix protein 1##AK097046|ECM1|1893|extracellular matrix protein 1##BC023505|ECM1|1893|extracellular matrix protein 1##U68186|ECM1|1893|extracellular matrix protein 1##U68187|ECM1|1893|extracellular matrix protein 1##AF203373|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BT006640|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##DQ890628|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##DQ893795|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##FJ917536|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AF118124|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC017197|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC071897|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##L08246|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK300499|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC107735|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK294462|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK316267|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK297217|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK304775|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK312508|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_001197320|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_021960|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_182763|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)	0.986532	CTCF.p2:-19:0.987
chr5	176745007	176745144	reg1006731.p1	12.423	+	NM_001142935 NM_031300	-5784	-	CU674382 DQ892734 DQ895981 DQ896213 BC041690 BC000745 BC032586 AF114834 AK222579 AK316468 AK057034 AK303397 TSC_hg19_v1_chr5_-_176738914	-6191	-	TSC_hg19_v1_chr5_+_176730812 BC000007 BC008866 AF087858 BC013733 AF112203 AF111112 AF153607 BC013748 NM_013237 BC008307 AF201925 CU680664 DQ891042 DQ894221 U94779	-14136	+	TSC_hg19_v1_chr5_-_176778650 U10362 AK222609	33564	-	TSC_hg19_v1_chr5_-_176778656 AK301607	33581	-	TSC_hg19_v1_chr5_-_176778666 AK292099 BC017263	33590	-	NM_001142935|MXD3|83463|MAX dimerization protein 3##NM_031300|MXD3|83463|MAX dimerization protein 3##DQ892734|MXD3|83463|MAX dimerization protein 3##DQ895981|MXD3|83463|MAX dimerization protein 3##DQ896213|MXD3|83463|MAX dimerization protein 3##BC041690|MXD3|83463|MAX dimerization protein 3##BC000745|MXD3|83463|MAX dimerization protein 3##BC032586|MXD3|83463|MAX dimerization protein 3##AF114834|MXD3|83463|MAX dimerization protein 3##AK222579|MXD3|83463|MAX dimerization protein 3##AK316468|MXD3|83463|MAX dimerization protein 3##AK057034|MXD3|83463|MAX dimerization protein 3##AK303397|MXD3|83463|MAX dimerization protein 3##BC000007|PRELID1|27166|PRELI domain containing 1##BC008866|PRELID1|27166|PRELI domain containing 1##AF087858|PRELID1|27166|PRELI domain containing 1##BC013733|PRELID1|27166|PRELI domain containing 1##AF112203|PRELID1|27166|PRELI domain containing 1##AF111112|PRELID1|27166|PRELI domain containing 1##AF153607|PRELID1|27166|PRELI domain containing 1##BC013748|PRELID1|27166|PRELI domain containing 1##NM_013237|PRELID1|27166|PRELI domain containing 1##BC008307|PRELID1|27166|PRELI domain containing 1##AF201925|PRELID1|27166|PRELI domain containing 1##DQ891042|PRELID1|27166|PRELI domain containing 1##DQ894221|PRELID1|27166|PRELI domain containing 1##U10362|LMAN2|10960|lectin, mannose-binding 2##AK222609|LMAN2|10960|lectin, mannose-binding 2##AK301607|LMAN2|10960|lectin, mannose-binding 2##AK292099|LMAN2|10960|lectin, mannose-binding 2##BC017263|LMAN2|10960|lectin, mannose-binding 2	0.999743	CTCF.p2:-11:1.000
chr19	48993120	48993262	reg1007858.p1	12.422	+	TSC_hg19_v1_chr19_+_48972625 AB209573 BC038713 AK292405 U70728 AK299590 BC004361 AB528907 DQ892565 DQ896856 X99753	-20522	+	NM_004228 NM_017457 TSC_hg19_v1_chr19_+_48972572	-20673	+	BC035918 NM_170720	-28686	+	AB384647 TSC_hg19_v1_chr19_-_49014849	21649	-	AB067470 NM_001080434	23240	-	TSC_hg19_v1_chr19_+_49055432 NM_177973 U92315 BC034694 CU689942	62273	+	AB209573|CYTH2|9266|cytohesin 2##BC038713|CYTH2|9266|cytohesin 2##AK292405|CYTH2|9266|cytohesin 2##U70728|CYTH2|9266|cytohesin 2##AK299590|CYTH2|9266|cytohesin 2##BC004361|CYTH2|9266|cytohesin 2##DQ892565|CYTH2|9266|cytohesin 2##DQ896856|CYTH2|9266|cytohesin 2##X99753|CYTH2|9266|cytohesin 2##NM_004228|CYTH2|9266|cytohesin 2##NM_017457|CYTH2|9266|cytohesin 2##BC035918|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##NM_170720|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##AB067470|LMTK3|114783|lemur tyrosine kinase 3##NM_001080434|LMTK3|114783|lemur tyrosine kinase 3##NM_177973|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##U92315|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##BC034694|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1	0.958961	CTCF.p2:5:0.959
chr18	55710863	55711006	reg1006143.p1	12.421	+	TSC_hg19_v1_chr18_-_55470548 NM_005603	-240464	-	NM_001242804 BC040476	-413377	+	TSC_hg19_v1_chr18_-_55289034 AK293985 NM_004539	-421833	-	TSC_hg19_v1_chr18_+_55711515 NM_001144967 NM_001243960 NM_015277	602	+	TSC_hg19_v1_chr18_+_55711771 AB071179	850	+	DQ890913 DQ893350 AY312514 TSC_hg19_v1_chr18_+_55711911	972	+	NM_005603|ATP8B1|5205|ATPase, aminophospholipid transporter, class I, type 8B, member 1##NM_001242804|LOC100505549|100505549|uncharacterized LOC100505549##BC040476|LOC100505549|100505549|uncharacterized LOC100505549##AK293985|NARS|4677|asparaginyl-tRNA synthetase##NM_004539|NARS|4677|asparaginyl-tRNA synthetase##NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001243960|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB071179|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.0	
chr4	163418869	163418967	reg1005241.p1	12.421	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	-333767	-	AK294459 NM_014247	-3229921	+	AK058100 NM_152543	-3462586	-	TSC_hg19_v1_chr4_-_164088002 AK097352	669074	-	TSC_hg19_v1_chr4_-_164088043 AK308601	669119	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	669160	-	AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.947125	CTCF.p2:-9:0.947
chrX	114877366	114877479	reg1006062.p2	12.421	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-49554	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-80380	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-81816	+	BC003645 TSC_hg19_v1_chrX_-_115085443	208017	-	AK313927 NM_000686 X87723 U16957	424573	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	690345	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.981485	CTCF.p2:13:0.981
chr13	25579164	25579282	reg1004152.p1	12.420	+	TSC_hg19_v1_chr13_-_25497054 NM_018451	-82154	-	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	-82254	-	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	-240904	+	NM_030979 AL136900 AK313336 BC045608 BC027617 AF132026 DQ892103 DQ895297	91082	+	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	166437	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	166594	-	NM_018451|CENPJ|55835|centromere protein J##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##NM_030979|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AL136900|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK313336|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC045608|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC027617|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AF132026|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ892103|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ895297|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A	0.789327	CTCF.p2:8:0.789
chr3	48031563	48031684	reg1006418.p1	12.420	+	TSC_hg19_v1_chr3_-_47957477 BX649077	-74080	-	TSC_hg19_v1_chr3_-_47934000 AK054696	-97593	-	TSC_hg19_v1_chr3_+_47866475 AK002076	-165135	+	TSC_hg19_v1_chr3_-_48040260 CU679053 EU831606 EU831693	8681	-	TSC_hg19_v1_chr3_-_48130339 BC019229 BC067228 BC051843 M64571 U19727 AB209377 AK307606 BC008715 BC012794 BC015149 AK297242	98714	-	TSC_hg19_v1_chr3_-_48130743 AK054577 NM_001134364 NM_002375 NM_030885	99077	-	AK054696|MAP4|4134|microtubule-associated protein 4##AK002076|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##EU831606|MAP4|4134|microtubule-associated protein 4##EU831693|MAP4|4134|microtubule-associated protein 4##BC019229|MAP4|4134|microtubule-associated protein 4##BC067228|MAP4|4134|microtubule-associated protein 4##BC051843|MAP4|4134|microtubule-associated protein 4##M64571|MAP4|4134|microtubule-associated protein 4##U19727|MAP4|4134|microtubule-associated protein 4##AB209377|MAP4|4134|microtubule-associated protein 4##AK307606|MAP4|4134|microtubule-associated protein 4##BC008715|MAP4|4134|microtubule-associated protein 4##BC012794|MAP4|4134|microtubule-associated protein 4##BC015149|MAP4|4134|microtubule-associated protein 4##AK297242|MAP4|4134|microtubule-associated protein 4##AK054577|MAP4|4134|microtubule-associated protein 4##NM_001134364|MAP4|4134|microtubule-associated protein 4##NM_002375|MAP4|4134|microtubule-associated protein 4##NM_030885|MAP4|4134|microtubule-associated protein 4	0.999833	CTCF.p2:9:1.000
chr9	95719597	95719729	reg1008407.p1	12.420	+	NM_001083536	-10063	+	AK299274 TSC_hg19_v1_chr9_-_95640325 AK091203 AX746846 NM_001007101 AL833202 NM_031486 AK292997 AK309617	-79386	-	AB014599 TSC_hg19_v1_chr9_-_95527124 AY052562 NM_001003800 NM_015250 BC073970	-192580	-	NM_033086 BX647829 BC111054 AY211386	17086	+	TSC_hg19_v1_chr9_+_95820982 BC014601 NM_145006	101313	+	TSC_hg19_v1_chr9_+_95821007 CU677063 DQ894024 EU176188 AY358190	101361	+	NM_001083536|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AK299274|ZNF484|83744|zinc finger protein 484##AK091203|ZNF484|83744|zinc finger protein 484##NM_001007101|ZNF484|83744|zinc finger protein 484##AL833202|ZNF484|83744|zinc finger protein 484##NM_031486|ZNF484|83744|zinc finger protein 484##AK292997|ZNF484|83744|zinc finger protein 484##AK309617|ZNF484|83744|zinc finger protein 484##AB014599|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AY052562|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_001003800|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_015250|BICD2|23299|bicaudal D homolog 2 (Drosophila)##BC073970|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_033086|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BX647829|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BC111054|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AY211386|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BC014601|SUSD3|203328|sushi domain containing 3##NM_145006|SUSD3|203328|sushi domain containing 3##DQ894024|SUSD3|203328|sushi domain containing 3##EU176188|SUSD3|203328|sushi domain containing 3##AY358190|SUSD3|203328|sushi domain containing 3	0.99587	CTCF.p2:-12:0.996
chr1	197838171	197838289	reg1007223.p1	12.419	+	TSC_hg19_v1_chr1_-_197744611 BC016588 NM_001195215 NM_001195216 NM_144977	-93652	-	TSC_hg19_v1_chr1_-_197744438 AK091207 AX746849 BC063877	-93765	-	TSC_hg19_v1_chr1_-_197744396 BC063456	-93834	-	BC130608 BC130634 NM_001024594 HQ258066 BC038214	33501	+	AJ296272 NM_001014434 AJ277915	43409	+	TSC_hg19_v1_chr1_+_197886502 AY273889 NM_020204	48277	+	BC016588|DENND1B|163486|DENN/MADD domain containing 1B##NM_001195215|DENND1B|163486|DENN/MADD domain containing 1B##NM_001195216|DENND1B|163486|DENN/MADD domain containing 1B##NM_144977|DENND1B|163486|DENN/MADD domain containing 1B##AK091207|DENND1B|163486|DENN/MADD domain containing 1B##BC063877|DENND1B|163486|DENN/MADD domain containing 1B##BC063456|DENND1B|163486|DENN/MADD domain containing 1B##BC130608|C1orf53|388722|chromosome 1 open reading frame 53##BC130634|C1orf53|388722|chromosome 1 open reading frame 53##NM_001024594|C1orf53|388722|chromosome 1 open reading frame 53##HQ258066|C1orf53|388722|chromosome 1 open reading frame 53##BC038214|C1orf53|388722|chromosome 1 open reading frame 53##AJ296272|LHX9|56956|LIM homeobox 9##NM_001014434|LHX9|56956|LIM homeobox 9##AJ277915|LHX9|56956|LIM homeobox 9##AY273889|LHX9|56956|LIM homeobox 9##NM_020204|LHX9|56956|LIM homeobox 9	0.089407	
chr8	27584857	27584995	reg1006908.p1	12.419	+	TSC_hg19_v1_chr8_+_27491466 AB007829 AB007830 NM_016240 NM_182826 BC075067 BC075068	-93348	+	BC060811 TSC_hg19_v1_chr8_+_27491395	-93537	+	AB527877 TSC_hg19_v1_chr8_-_27472317 NM_001831	-112614	-	BC006239 TSC_hg19_v1_chr8_-_27630126 BC054039 BC065295 BC110391 AK027900 AK316015 BC049197 AK311437 BC032588 AK292875 AK294848 AK001715 NM_018246	45208	-	AF306677 AF306678 TSC_hg19_v1_chr8_+_27632070 AF306675 AY882862 NM_001017420 AK124215 AF306679 AL832666 BC017933 BC034641	47073	+	TSC_hg19_v1_chr8_-_27695325 AF189722 AB027250 AK027291 AF237709 BC015191 AB027249 NM_018492	110421	-	AB007829|SCARA3|51435|scavenger receptor class A, member 3##AB007830|SCARA3|51435|scavenger receptor class A, member 3##NM_016240|SCARA3|51435|scavenger receptor class A, member 3##NM_182826|SCARA3|51435|scavenger receptor class A, member 3##BC075067|SCARA3|51435|scavenger receptor class A, member 3##BC075068|SCARA3|51435|scavenger receptor class A, member 3##BC060811|SCARA3|51435|scavenger receptor class A, member 3##NM_001831|CLU|1191|clusterin##BC006239|CCDC25|55246|coiled-coil domain containing 25##BC054039|CCDC25|55246|coiled-coil domain containing 25##BC065295|CCDC25|55246|coiled-coil domain containing 25##BC110391|CCDC25|55246|coiled-coil domain containing 25##AK027900|CCDC25|55246|coiled-coil domain containing 25##AK316015|CCDC25|55246|coiled-coil domain containing 25##BC049197|CCDC25|55246|coiled-coil domain containing 25##AK311437|CCDC25|55246|coiled-coil domain containing 25##BC032588|CCDC25|55246|coiled-coil domain containing 25##AK292875|CCDC25|55246|coiled-coil domain containing 25##AK294848|CCDC25|55246|coiled-coil domain containing 25##AK001715|CCDC25|55246|coiled-coil domain containing 25##NM_018246|CCDC25|55246|coiled-coil domain containing 25##AF306677|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF306678|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF306675|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AY882862|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##NM_001017420|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AK124215|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF306679|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AL832666|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##BC017933|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##BC034641|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF189722|PBK|55872|PDZ binding kinase##AB027250|PBK|55872|PDZ binding kinase##AK027291|PBK|55872|PDZ binding kinase##AF237709|PBK|55872|PDZ binding kinase##BC015191|PBK|55872|PDZ binding kinase##AB027249|PBK|55872|PDZ binding kinase##NM_018492|PBK|55872|PDZ binding kinase	0.996867	CTCF.p2:20:0.997
chr12	121990657	121990765	reg1005901.p1	12.418	+	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	-85637	-	AF306709 TSC_hg19_v1_chr12_+_121837931 NM_025126 NM_194271 AK025439 AK225285 AK304366 BC007826 BC039029 BC046174 BC029038	-152747	+	AK025614 NM_001137559	-198700	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	27548	-	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	28203	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	73932	+	BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##AF306709|RNF34|80196|ring finger protein 34##NM_025126|RNF34|80196|ring finger protein 34##NM_194271|RNF34|80196|ring finger protein 34##AK025439|RNF34|80196|ring finger protein 34##AK225285|RNF34|80196|ring finger protein 34##BC007826|RNF34|80196|ring finger protein 34##BC039029|RNF34|80196|ring finger protein 34##BC046174|RNF34|80196|ring finger protein 34##AK025614|ANAPC5|51433|anaphase promoting complex subunit 5##NM_001137559|ANAPC5|51433|anaphase promoting complex subunit 5##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1	0.953594	CTCF.p2:-5:0.954
chr20	19765674	19765777	reg1005844.p1	12.418	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	-572272	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	-572440	+	NM_001242671	-954887	-	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	101418	+	BC128065 NM_018993 TSC_hg19_v1_chr20_+_19870217 AB060339	104502	+	TSC_hg19_v1_chr20_+_19915762 BC034698 AL136924	150024	+	AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2##BC128065|RIN2|54453|Ras and Rab interactor 2##NM_018993|RIN2|54453|Ras and Rab interactor 2##AB060339|RIN2|54453|Ras and Rab interactor 2##BC034698|RIN2|54453|Ras and Rab interactor 2##AL136924|RIN2|54453|Ras and Rab interactor 2	0.067974	
chr6	2354228	2354361	reg1007659.p1	12.418	+	TSC_hg19_v1_chr6_+_2245995 AK023629	-108281	+	CR541929 CR541947 DQ892789 DQ896036 AF042377 TSC_hg19_v1_chr6_-_2245809 AK130651 AK313953 BC000117 NM_001500	-108496	-	AF040260 NM_001253846	-178070	-	NM_152554	281003	-	BX647582 NM_001012418 AK096893	396882	-	TSC_hg19_v1_chr6_+_2765561 AK315047	411286	+	CR541929|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541947|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ892789|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ896036|GMDS|2762|GDP-mannose 4,6-dehydratase##AF042377|GMDS|2762|GDP-mannose 4,6-dehydratase##AK130651|GMDS|2762|GDP-mannose 4,6-dehydratase##AK313953|GMDS|2762|GDP-mannose 4,6-dehydratase##BC000117|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001500|GMDS|2762|GDP-mannose 4,6-dehydratase##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_152554|C6orf195|154386|chromosome 6 open reading frame 195##BX647582|MYLK4|340156|myosin light chain kinase family, member 4##NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4##AK096893|MYLK4|340156|myosin light chain kinase family, member 4##AK315047|WRNIP1|56897|Werner helicase interacting protein 1	0.96081	CTCF.p2:21:0.961
chr1	38356191	38356298	reg1005518.p1	12.417	+	TSC_hg19_v1_chr1_-_38325265 X78710 AK225923 AK298751 AK309584 AK314233 BC014454 NM_005955	-30986	-	AY517499 TSC_hg19_v1_chr1_+_38273967 BC107856 BC057819 AK127381 BC102041 BC127187 BC127188 BC141938	-82334	+	TSC_hg19_v1_chr1_-_38273855 AY172561 NM_024640 BC080186	-82373	-	TSC_hg19_v1_chr1_-_38397424 AK022846	41191	-	TSC_hg19_v1_chr1_-_38412689 AL833055 BC058932	56438	-	TSC_hg19_v1_chr1_-_38412717 BC062317 AK310824	56467	-	X78710|MTF1|4520|metal-regulatory transcription factor 1##AK225923|MTF1|4520|metal-regulatory transcription factor 1##AK298751|MTF1|4520|metal-regulatory transcription factor 1##AK309584|MTF1|4520|metal-regulatory transcription factor 1##AK314233|MTF1|4520|metal-regulatory transcription factor 1##BC014454|MTF1|4520|metal-regulatory transcription factor 1##NM_005955|MTF1|4520|metal-regulatory transcription factor 1##AY517499|C1orf122|127687|chromosome 1 open reading frame 122##BC107856|C1orf122|127687|chromosome 1 open reading frame 122##BC057819|C1orf122|127687|chromosome 1 open reading frame 122##AK127381|C1orf122|127687|chromosome 1 open reading frame 122##BC102041|C1orf122|127687|chromosome 1 open reading frame 122##BC127187|C1orf122|127687|chromosome 1 open reading frame 122##BC127188|C1orf122|127687|chromosome 1 open reading frame 122##AY172561|YRDC|79693|yrdC domain containing (E. coli)##NM_024640|YRDC|79693|yrdC domain containing (E. coli)##BC080186|YRDC|79693|yrdC domain containing (E. coli)##AK022846|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##AL833055|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##BC058932|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##BC062317|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##AK310824|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa	0.963811	CTCF.p2:-1:0.964
chr17	7492732	7492856	reg1007699.p1	12.417	+	BC001898 TSC_hg19_v1_chr17_+_7487169 AF038961 AK027742 AK075299 AK225401 AK225432 AK297001 AK297691 AK314527 AK055923 AK300083 AK300140 CU674920 DQ499597	-5628	+	AF059752 TSC_hg19_v1_chr17_+_7487135	-5662	+	NM_004870	-5830	+	BC072003 BC000985 AK301687 AB006867 NM_006942	644	-	EU352656 TSC_hg19_v1_chr17_+_7517349 EU352670 EU352671 EU352672 EU352673 EU352674 EU352675 EU352676	24528	+	BT009817 CU676498 CU690884 AK313836 BC051907 U31501 TSC_hg19_v1_chr17_-_7518073	25168	-	BC001898|MPDU1|9526|mannose-P-dolichol utilization defect 1##AF038961|MPDU1|9526|mannose-P-dolichol utilization defect 1##AK027742|MPDU1|9526|mannose-P-dolichol utilization defect 1##AK075299|MPDU1|9526|mannose-P-dolichol utilization defect 1##AK225401|MPDU1|9526|mannose-P-dolichol utilization defect 1##AK225432|MPDU1|9526|mannose-P-dolichol utilization defect 1##AK297001|MPDU1|9526|mannose-P-dolichol utilization defect 1##AK297691|MPDU1|9526|mannose-P-dolichol utilization defect 1##AK314527|MPDU1|9526|mannose-P-dolichol utilization defect 1##AK055923|MPDU1|9526|mannose-P-dolichol utilization defect 1##AK300083|MPDU1|9526|mannose-P-dolichol utilization defect 1##AK300140|MPDU1|9526|mannose-P-dolichol utilization defect 1##DQ499597|MPDU1|9526|mannose-P-dolichol utilization defect 1##AF059752|MPDU1|9526|mannose-P-dolichol utilization defect 1##NM_004870|MPDU1|9526|mannose-P-dolichol utilization defect 1##BC072003|SOX15|6665|SRY (sex determining region Y)-box 15##BC000985|SOX15|6665|SRY (sex determining region Y)-box 15##AB006867|SOX15|6665|SRY (sex determining region Y)-box 15##NM_006942|SOX15|6665|SRY (sex determining region Y)-box 15##EU352656|SHBG|6462|sex hormone-binding globulin##EU352670|SHBG|6462|sex hormone-binding globulin##EU352671|SHBG|6462|sex hormone-binding globulin##EU352672|SHBG|6462|sex hormone-binding globulin##EU352673|SHBG|6462|sex hormone-binding globulin##EU352674|SHBG|6462|sex hormone-binding globulin##EU352675|SHBG|6462|sex hormone-binding globulin##EU352676|SHBG|6462|sex hormone-binding globulin##BT009817|FXR2|9513|fragile X mental retardation, autosomal homolog 2##AK313836|FXR2|9513|fragile X mental retardation, autosomal homolog 2##BC051907|FXR2|9513|fragile X mental retardation, autosomal homolog 2##U31501|FXR2|9513|fragile X mental retardation, autosomal homolog 2	0.944299	CTCF.p2:4:0.944
chr1	157166806	157166947	reg1007949.p1	12.416	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-58593	-	TSC_hg19_v1_chr1_-_157108158 L16464	-58726	-	AK131392 NM_001004341	-97277	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	355354	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	400925	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	503651	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.270007	CTCF.p2:-3:0.270
chr16	21652146	21652260	reg1006937.p1	12.416	+	AF151839 TSC_hg19_v1_chr16_+_21611174	-41049	+	TSC_hg19_v1_chr16_+_21610912 NM_001077180 NM_016025 AJ278577 AJ278578 AK074529 BC000195 AK313077 AK075022 AK075237	-41313	+	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	-120451	-	TSC_hg19_v1_chr16_-_21663930 DQ892013 DQ895202 EU176227 EU176324 AK313860 AK223286 AK290910 AK293703 BC017844	11717	-	AJ223183 TSC_hg19_v1_chr16_-_21663991 NM_005849	11773	-	BC129993 NM_144672 BC129992	37632	+	AF151839|METTL9|51108|methyltransferase like 9##NM_001077180|METTL9|51108|methyltransferase like 9##NM_016025|METTL9|51108|methyltransferase like 9##AJ278577|METTL9|51108|methyltransferase like 9##AJ278578|METTL9|51108|methyltransferase like 9##AK074529|METTL9|51108|methyltransferase like 9##BC000195|METTL9|51108|methyltransferase like 9##AK313077|METTL9|51108|methyltransferase like 9##AK075022|METTL9|51108|methyltransferase like 9##AK075237|METTL9|51108|methyltransferase like 9##BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2##DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6##DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6##EU176227|IGSF6|10261|immunoglobulin superfamily, member 6##EU176324|IGSF6|10261|immunoglobulin superfamily, member 6##AK313860|IGSF6|10261|immunoglobulin superfamily, member 6##AK223286|IGSF6|10261|immunoglobulin superfamily, member 6##AK290910|IGSF6|10261|immunoglobulin superfamily, member 6##AK293703|IGSF6|10261|immunoglobulin superfamily, member 6##BC017844|IGSF6|10261|immunoglobulin superfamily, member 6##AJ223183|IGSF6|10261|immunoglobulin superfamily, member 6##NM_005849|IGSF6|10261|immunoglobulin superfamily, member 6##BC129993|OTOA|146183|otoancorin##NM_144672|OTOA|146183|otoancorin##BC129992|OTOA|146183|otoancorin	0.25502	CTCF.p2:-4:0.255
chr12	80132032	80132150	reg1004787.p1	12.415	+	U63809 TSC_hg19_v1_chr12_-_80084784 NM_002583	-47326	-	AB590922 CR536549 BC007018 TSC_hg19_v1_chr12_-_80084318	-47876	-	CR627387 NM_001135806 AK308743	-692640	+	AK302692 NM_001143886	175599	-	TSC_hg19_v1_chr12_-_80328878 BC062560 AY380574 BC111752 D87930 AK314193 NM_001244992 BC047898 BC000812	196709	-	TSC_hg19_v1_chr12_-_80328937 NM_002480	196875	-	U63809|PAWR|5074|PRKC, apoptosis, WT1, regulator##NM_002583|PAWR|5074|PRKC, apoptosis, WT1, regulator##CR536549|PAWR|5074|PRKC, apoptosis, WT1, regulator##BC007018|PAWR|5074|PRKC, apoptosis, WT1, regulator##CR627387|SYT1|6857|synaptotagmin I##NM_001135806|SYT1|6857|synaptotagmin I##AK308743|SYT1|6857|synaptotagmin I##AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC062560|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##AY380574|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC111752|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##D87930|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##AK314193|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001244992|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC047898|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC000812|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_002480|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	0.997287	CTCF.p2:5:0.997
chr14	75075707	75075822	reg1005355.p1	12.414	+	TSC_hg19_v1_chr14_+_74960467 AK290728 NM_194279 BC015771 BX248252 BC032893	-115306	+	TSC_hg19_v1_chr14_-_74960037 AK311931 BC002532 NM_006432	-115705	-	AK222474 TSC_hg19_v1_chr14_-_74960013 AK300879	-115750	-	TSC_hg19_v1_chr14_-_75078940 BC078659 Z37976 NM_000428 S82451	3095	-	TSC_hg19_v1_chr14_-_75179784 AB002315 AK304217 AK296912 BX248747 BC032944 NM_001039479	104012	-	TSC_hg19_v1_chr14_+_75179883 NM_015962 AK290666 BC022361 AK021636 BC080600 BX248271	104111	+	AK290728|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##NM_194279|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##BC015771|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##BX248252|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##BC032893|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##AK311931|NPC2|10577|Niemann-Pick disease, type C2##BC002532|NPC2|10577|Niemann-Pick disease, type C2##NM_006432|NPC2|10577|Niemann-Pick disease, type C2##AK222474|NPC2|10577|Niemann-Pick disease, type C2##AK300879|NPC2|10577|Niemann-Pick disease, type C2##BC078659|LTBP2|4053|latent transforming growth factor beta binding protein 2##Z37976|LTBP2|4053|latent transforming growth factor beta binding protein 2##NM_000428|LTBP2|4053|latent transforming growth factor beta binding protein 2##S82451|LTBP2|4053|latent transforming growth factor beta binding protein 2##AB002315|KIAA0317|9870|KIAA0317##AK304217|KIAA0317|9870|KIAA0317##AK296912|KIAA0317|9870|KIAA0317##BX248747|KIAA0317|9870|KIAA0317##BC032944|KIAA0317|9870|KIAA0317##NM_001039479|KIAA0317|9870|KIAA0317##NM_015962|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK290666|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC022361|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK021636|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC080600|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BX248271|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)	0.893936	CTCF.p2:1:0.894
chr11	74916105	74916212	reg1004760.p1	12.412	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	-45317	+	NM_001145212 NM_007256 FM209050 TSC_hg19_v1_chr11_+_74862151 AK304783 AK302492 AK290234 AK300134 AB020687 BC127254 BC041095 AB026256 AL117465	-54014	+	NM_001005285 BC136958 BC136959	-115381	-	NM_001195528	35791	+	AF084040 AF084940 FJ348262 CU678548 AB462955 TSC_hg19_v1_chr11_-_75062708 AK289718 BC003636 NM_004041 NM_020251	146658	-	TSC_hg19_v1_chr11_+_75110562 D28344 AK130960 BC034149 NM_001005 AK129794 AK313051 BC013231 BC100284 X55715 BC071917 AK223048 BC003137 BC071669 S42658 AB464166 CU678394 DQ892888 DQ896136 U14990 U14991 U14992 BC003577 BC013196 AB062288	194417	+	FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145212|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_007256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209050|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK304783|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK302492|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK290234|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK300134|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB020687|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC127254|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC041095|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB026256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AL117465|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001005285|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##BC136958|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##BC136959|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050##AF084040|ARRB1|408|arrestin, beta 1##AF084940|ARRB1|408|arrestin, beta 1##FJ348262|ARRB1|408|arrestin, beta 1##AK289718|ARRB1|408|arrestin, beta 1##BC003636|ARRB1|408|arrestin, beta 1##NM_004041|ARRB1|408|arrestin, beta 1##NM_020251|ARRB1|408|arrestin, beta 1##D28344|RPS3|6188|ribosomal protein S3##AK130960|RPS3|6188|ribosomal protein S3##BC034149|RPS3|6188|ribosomal protein S3##NM_001005|RPS3|6188|ribosomal protein S3##AK129794|RPS3|6188|ribosomal protein S3##AK313051|RPS3|6188|ribosomal protein S3##BC013231|RPS3|6188|ribosomal protein S3##BC100284|RPS3|6188|ribosomal protein S3##X55715|RPS3|6188|ribosomal protein S3##BC071917|RPS3|6188|ribosomal protein S3##AK223048|RPS3|6188|ribosomal protein S3##BC003137|RPS3|6188|ribosomal protein S3##BC071669|RPS3|6188|ribosomal protein S3##S42658|RPS3|6188|ribosomal protein S3##DQ892888|RPS3|6188|ribosomal protein S3##DQ896136|RPS3|6188|ribosomal protein S3##U14990|RPS3|6188|ribosomal protein S3##U14991|RPS3|6188|ribosomal protein S3##U14992|RPS3|6188|ribosomal protein S3##BC003577|RPS3|6188|ribosomal protein S3##BC013196|RPS3|6188|ribosomal protein S3##AB062288|RPS3|6188|ribosomal protein S3	0.998992	CTCF.p2:11:0.999
chr10	97134526	97134629	reg1004594.p1	12.411	+	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	-83795	-	AK126134 NM_207321	-180621	+	M21942 M21941 DQ891400 DQ894579 M17397 M17398 AK303813 Y00498 AK292753 AK293327 AK293328 AK298401 AK315823 BC020596 NM_000770 NM_001198853 NM_001198854 NM_001198855	-305414	-	AM393082 NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_006434	66338	-	TSC_hg19_v1_chr10_-_97321129 AB037717 BC152463 AK022468 AK300407 AK304753 AL117472 AM260536 NM_015385 NM_024991	186562	-	TSC_hg19_v1_chr10_-_97416472 U68758 U76542 BC106054 AK225455 AK225465 AK226032 AK295487 X94453 AK299557 AK312271 BC117240 BC117242 BC143930	281860	-	AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1##AK126134|C10orf129|142827|chromosome 10 open reading frame 129##NM_207321|C10orf129|142827|chromosome 10 open reading frame 129##M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AM393082|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1##NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1##AB037717|SORBS1|10580|sorbin and SH3 domain containing 1##BC152463|SORBS1|10580|sorbin and SH3 domain containing 1##AK022468|SORBS1|10580|sorbin and SH3 domain containing 1##AK300407|SORBS1|10580|sorbin and SH3 domain containing 1##AK304753|SORBS1|10580|sorbin and SH3 domain containing 1##AL117472|SORBS1|10580|sorbin and SH3 domain containing 1##AM260536|SORBS1|10580|sorbin and SH3 domain containing 1##NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1##NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1##U68758|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##U76542|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC106054|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK225455|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK225465|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK226032|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK295487|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##X94453|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK299557|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK312271|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC117240|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC117242|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC143930|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1	0.993907	CTCF.p2:-14:0.994
chr16	23446880	23447014	reg1007643.p1	12.410	+	NM_000336 BC036352 X87159 AK313192	-133320	+	U48936 BC059391 NM_001039 TSC_hg19_v1_chr16_+_23194066	-252895	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	-286398	-	TSC_hg19_v1_chr16_-_23464487 BC000549 BC037563 NM_153603	17548	-	TSC_hg19_v1_chr16_-_23521748 AB384559 CU674130 DQ892534 DQ895745 BC050620 AF165531	74788	-	AF190863 AF323754 AF233522 TSC_hg19_v1_chr16_-_23521769	74815	-	NM_000336|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC036352|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##X87159|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##AK313192|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##U48936|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##BC059391|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_001039|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31##BC000549|COG7|91949|component of oligomeric golgi complex 7##BC037563|COG7|91949|component of oligomeric golgi complex 7##NM_153603|COG7|91949|component of oligomeric golgi complex 7##DQ892534|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##DQ895745|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##BC050620|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF165531|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF190863|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF323754|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF233522|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	0.997795	CTCF.p2:1:0.998
chr10	73982702	73982842	reg1007671.p1	12.408	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-6661	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-6984	+	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	-7008	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	51052	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	131906	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	132154	-	AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	0.04451	
chr1	2486431	2486592	reg1006216.p1	12.408	+	BC087840 DQ272660 NM_001010926	-24828	-	TSC_hg19_v1_chr1_-_2458040 AL442072 BC043496 AK001644 AK223546 AK303127 AK309860 NM_018216 AK295301	-28447	-	DQ176850 NM_014638 BC144620	-78754	+	AK300515 NM_003820 U70321 AK303468 BC029848 BC002794 BC018882 U81232 AF153978 AK310076 AB208808 AY358879 CU678202 AB590572 DQ893000 DQ896755 AF373877 AF373878 CR456909	1442	+	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	31677	+	TSC_hg19_v1_chr1_+_2518534 AK094901	32003	+	BC087840|HES5|388585|hairy and enhancer of split 5 (Drosophila)##DQ272660|HES5|388585|hairy and enhancer of split 5 (Drosophila)##NM_001010926|HES5|388585|hairy and enhancer of split 5 (Drosophila)##AL442072|PANK4|55229|pantothenate kinase 4##BC043496|PANK4|55229|pantothenate kinase 4##AK001644|PANK4|55229|pantothenate kinase 4##AK223546|PANK4|55229|pantothenate kinase 4##AK303127|PANK4|55229|pantothenate kinase 4##AK309860|PANK4|55229|pantothenate kinase 4##NM_018216|PANK4|55229|pantothenate kinase 4##AK295301|PANK4|55229|pantothenate kinase 4##DQ176850|PLCH2|9651|phospholipase C, eta 2##NM_014638|PLCH2|9651|phospholipase C, eta 2##BC144620|PLCH2|9651|phospholipase C, eta 2##AK300515|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##NM_003820|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U70321|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK303468|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC029848|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC002794|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC018882|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U81232|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF153978|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK310076|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AB208808|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AY358879|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ893000|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ896755|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373877|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373878|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##CR456909|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B##AK094901|FAM213B|127281|family with sequence similarity 213, member B	0.228112	
chr14	38343968	38344100	reg1006943.p1	12.408	+	TSC_hg19_v1_chr14_-_38064444 NM_004496	-279570	-	TSC_hg19_v1_chr14_-_38064316 AK313785	-279718	-	AB463645 CU689794 AM392863 AM393239 AM393310 AM393369 TSC_hg19_v1_chr14_-_38064234 BC033890	-279828	-	TSC_hg19_v1_chr14_+_38677186 BX248780 NM_001049	333160	+	AK290868 TSC_hg19_v1_chr14_+_38678303 BC035618	334266	+	AB384936 DQ893328 DQ896644 TSC_hg19_v1_chr14_+_38678642	334585	+	NM_004496|FOXA1|3169|forkhead box A1##AK313785|FOXA1|3169|forkhead box A1##AM392863|FOXA1|3169|forkhead box A1##AM393239|FOXA1|3169|forkhead box A1##AM393310|FOXA1|3169|forkhead box A1##AM393369|FOXA1|3169|forkhead box A1##BC033890|FOXA1|3169|forkhead box A1##BX248780|SSTR1|6751|somatostatin receptor 1##NM_001049|SSTR1|6751|somatostatin receptor 1##AK290868|SSTR1|6751|somatostatin receptor 1##BC035618|SSTR1|6751|somatostatin receptor 1##DQ893328|SSTR1|6751|somatostatin receptor 1##DQ896644|SSTR1|6751|somatostatin receptor 1	0.999864	CTCF.p2:9:1.000
chr6	14067171	14067316	reg1006822.p1	12.408	+	NM_001165033 AK090576 AX746519	-141800	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	-142077	+	NM_001165034	-142567	+	NM_001251901	50243	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	50662	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	50779	+	NM_001165033|RNF182|221687|ring finger protein 182##AK090576|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182##NM_001165034|RNF182|221687|ring finger protein 182##NM_001251901|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule	0.517155	CTCF.p2:-14:0.517
chr6	167188814	167188923	reg1006343.p1	12.407	+	TSC_hg19_v1_chr6_-_167040713 BC002363 NM_021135	-148150	-	TSC_hg19_v1_chr6_-_167040662 X85106	-148199	-	DQ891864 DQ895053 L07598 TSC_hg19_v1_chr6_-_167040629	-148291	-	AB384854 NM_001006932 AB209116	86860	-	TSC_hg19_v1_chr6_-_167276000 AK095751	87140	-	DQ884402 TSC_hg19_v1_chr6_-_167369732	180834	-	BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##X85106|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##DQ891864|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##DQ895053|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##L07598|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##AK095751|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	0.999557	CTCF.p2:-10:1.000
chr11	67030276	67030412	reg1007745.p1	12.406	+	TSC_hg19_v1_chr11_+_67007558 AB490246 AK299725	-22761	+	AK096194 TSC_hg19_v1_chr11_+_67007484	-22860	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	-143605	+	TSC_hg19_v1_chr11_+_67033926 NM_001619	3564	+	TSC_hg19_v1_chr11_+_67033929 BC037963 BC090863	3590	+	TSC_hg19_v1_chr11_+_67034155 M80776	3809	+	AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A##AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A##AK096194|LOC100131150|100131150|uncharacterized LOC100131150##BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_001619|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC037963|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC090863|ADRBK1|156|adrenergic, beta, receptor kinase 1##M80776|ADRBK1|156|adrenergic, beta, receptor kinase 1	0.997285	CTCF.p2:-17:0.997
chr20	23965341	23965474	reg1007101.p1	12.406	+	AB590893 CU686872 HQ447459 BC069514 X70377 BC062678 NM_001900	-105061	-	CU687582 NM_001322 BC062679	-158075	-	J03870 BC021225 NM_001898	-233842	-	L20492 L20491 NM_178312	2064	-	BC040904 NM_178311	4008	-	AK024282 NM_024893	484427	+	HQ447459|CST5|1473|cystatin D##BC069514|CST5|1473|cystatin D##X70377|CST5|1473|cystatin D##BC062678|CST5|1473|cystatin D##NM_001900|CST5|1473|cystatin D##NM_001322|CST2|1470|cystatin SA##BC062679|CST2|1470|cystatin SA##J03870|CST1|1469|cystatin SN##BC021225|CST1|1469|cystatin SN##NM_001898|CST1|1469|cystatin SN##L20492|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20491|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178312|GGTLC1|92086|gamma-glutamyltransferase light chain 1##BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1	1.011847	CTCF.p2:20:0.998
chr20	62714937	62715061	reg1007844.p1	12.405	+	AF285093 AK308203 NM_000913 NM_182647 L40949 AF285095	-3520	+	AF285097 BC001318 TSC_hg19_v1_chr20_-_62711288 NM_001039467 AF285096	-3744	-	BC054337 TSC_hg19_v1_chr20_-_62710872 BC063010 NM_005873 AK298240 AK290081 X91809 BC022197	-4149	-	BC036837 NM_001007125	712	-	BC038433 NM_001200019	1369	+	BC067481 BC067482 BC067483 CU688304 CU688306 NM_005286	23184	-	AF285093|OPRL1|4987|opiate receptor-like 1##AK308203|OPRL1|4987|opiate receptor-like 1##NM_000913|OPRL1|4987|opiate receptor-like 1##NM_182647|OPRL1|4987|opiate receptor-like 1##L40949|OPRL1|4987|opiate receptor-like 1##AF285095|OPRL1|4987|opiate receptor-like 1##AF285097|RGS19|10287|regulator of G-protein signaling 19##BC001318|RGS19|10287|regulator of G-protein signaling 19##NM_001039467|RGS19|10287|regulator of G-protein signaling 19##AF285096|RGS19|10287|regulator of G-protein signaling 19##BC054337|RGS19|10287|regulator of G-protein signaling 19##BC063010|RGS19|10287|regulator of G-protein signaling 19##NM_005873|RGS19|10287|regulator of G-protein signaling 19##AK298240|RGS19|10287|regulator of G-protein signaling 19##AK290081|RGS19|10287|regulator of G-protein signaling 19##X91809|RGS19|10287|regulator of G-protein signaling 19##BC036837|C20orf201|198437|chromosome 20 open reading frame 201##NM_001007125|C20orf201|198437|chromosome 20 open reading frame 201##BC038433|OPRL1|4987|opiate receptor-like 1##NM_001200019|OPRL1|4987|opiate receptor-like 1##BC067481|NPBWR2|2832|neuropeptides B/W receptor 2##BC067482|NPBWR2|2832|neuropeptides B/W receptor 2##BC067483|NPBWR2|2832|neuropeptides B/W receptor 2##NM_005286|NPBWR2|2832|neuropeptides B/W receptor 2	0.0	
chrX	23920070	23920202	reg1006566.p1	12.405	+	TSC_hg19_v1_chrX_-_23855464 AK303908 D28399	-64676	-	TSC_hg19_v1_chrX_+_23801432 M55580 AY841998 AB464243 AM392717 BT006825 CR450294	-118687	+	NM_002970 TSC_hg19_v1_chrX_+_23801289 AK310078 BC008424 AK312162 AK310094 M77693 AL050290 BC002503 AK315888	-118824	+	TSC_hg19_v1_chrX_-_23926052 AY359114 AK311865 AF061264 BC016814 BC002333 BC010102 NM_024122	5874	-	AK058173 NM_001169574 NM_152761 BC117344 BC117346 BC144007	6030	+	AK057298 NM_030624	125166	-	AK303908|RPL9|6133|ribosomal protein L9##M55580|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AY841998|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BT006825|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##CR450294|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##NM_002970|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK310078|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BC008424|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK312162|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##M77693|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AL050290|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BC002503|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK315888|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AY359114|APOO|79135|apolipoprotein O##AK311865|APOO|79135|apolipoprotein O##AF061264|APOO|79135|apolipoprotein O##BC016814|APOO|79135|apolipoprotein O##BC002333|APOO|79135|apolipoprotein O##BC010102|APOO|79135|apolipoprotein O##NM_024122|APOO|79135|apolipoprotein O##AK058173|CXorf58|254158|chromosome X open reading frame 58##NM_001169574|CXorf58|254158|chromosome X open reading frame 58##NM_152761|CXorf58|254158|chromosome X open reading frame 58##BC117344|CXorf58|254158|chromosome X open reading frame 58##BC117346|CXorf58|254158|chromosome X open reading frame 58##BC144007|CXorf58|254158|chromosome X open reading frame 58##AK057298|KLHL15|80311|kelch-like 15 (Drosophila)##NM_030624|KLHL15|80311|kelch-like 15 (Drosophila)	0.739225	CTCF.p2:12:0.739
chr10	43951234	43951362	reg1005763.p2	12.404	+	AK302442 TSC_hg19_v1_chr10_+_43932667	-18678	+	TSC_hg19_v1_chr10_-_43904631 BC015580 BC004254 AK296696 NM_004966 NM_001098204	-46652	-	TSC_hg19_v1_chr10_-_43904306 AK001364 NM_001098205	-46980	-	NM_005674 X82125	112608	-	BC026030 X82128 AK292013 NM_001099282 NM_001099283 NM_001099284	118738	-	AK074679 AK299707 NM_145312 TSC_hg19_v1_chr10_+_44101877 BC014161	150568	+	AK302442|ZNF487P|642819|zinc finger protein 487, pseudogene##BC015580|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##BC004254|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##AK296696|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_004966|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_001098204|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##AK001364|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_001098205|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_005674|ZNF239|8187|zinc finger protein 239##X82125|ZNF239|8187|zinc finger protein 239##BC026030|ZNF239|8187|zinc finger protein 239##X82128|ZNF239|8187|zinc finger protein 239##AK292013|ZNF239|8187|zinc finger protein 239##NM_001099282|ZNF239|8187|zinc finger protein 239##NM_001099283|ZNF239|8187|zinc finger protein 239##NM_001099284|ZNF239|8187|zinc finger protein 239##AK074679|ZNF485|220992|zinc finger protein 485##AK299707|ZNF485|220992|zinc finger protein 485##NM_145312|ZNF485|220992|zinc finger protein 485##BC014161|ZNF485|220992|zinc finger protein 485	0.175411	
chr1	33338343	33338476	reg1006977.p1	12.403	+	BC062297 NM_001171941	-328	-	BX537781 AK092102 AX747354 NM_001171940 NM_153756 TSC_hg19_v1_chr1_-_33336539	-1989	-	NM_003680 AK125213	-54717	-	TSC_hg19_v1_chr1_+_33352097 DQ426877 AK313907 BC001777 NM_002143	13675	+	AY359883 TSC_hg19_v1_chr1_-_33366959 AY027543 BC020497 BC001418 BC013953 NM_033504 BC023260	28525	-	NM_001127361 NM_153341 TSC_hg19_v1_chr1_-_33430415 AK131439	91987	-	BC062297|FNDC5|252995|fibronectin type III domain containing 5##NM_001171941|FNDC5|252995|fibronectin type III domain containing 5##BX537781|FNDC5|252995|fibronectin type III domain containing 5##AK092102|FNDC5|252995|fibronectin type III domain containing 5##NM_001171940|FNDC5|252995|fibronectin type III domain containing 5##NM_153756|FNDC5|252995|fibronectin type III domain containing 5##NM_003680|YARS|8565|tyrosyl-tRNA synthetase##AK125213|YARS|8565|tyrosyl-tRNA synthetase##DQ426877|HPCA|3208|hippocalcin##AK313907|HPCA|3208|hippocalcin##BC001777|HPCA|3208|hippocalcin##NM_002143|HPCA|3208|hippocalcin##AY359883|TMEM54|113452|transmembrane protein 54##AY027543|TMEM54|113452|transmembrane protein 54##BC020497|TMEM54|113452|transmembrane protein 54##BC001418|TMEM54|113452|transmembrane protein 54##BC013953|TMEM54|113452|transmembrane protein 54##NM_033504|TMEM54|113452|transmembrane protein 54##BC023260|TMEM54|113452|transmembrane protein 54##NM_001127361|RNF19B|127544|ring finger protein 19B##NM_153341|RNF19B|127544|ring finger protein 19B##AK131439|RNF19B|127544|ring finger protein 19B	0.999539	CTCF.p2:7:1.000
chr3	170529893	170530020	reg1005427.p2	12.403	+	TSC_hg19_v1_chr3_-_170303774 AK122655 NM_020949	-226138	-	AK098766 NM_001185056 AK294087	-390915	+	NM_005602 TSC_hg19_v1_chr3_+_170136652 AK294108 AK312923 BC013577	-393298	+	TSC_hg19_v1_chr3_-_170587985 BC107708 AL110170 BC062731 NM_001099645	58039	-	TSC_hg19_v1_chr3_-_170626397 AK311962 BC036072	96435	-	AY205258 AY205259 AY205260 AY205261 NM_020390 TSC_hg19_v1_chr3_-_170626427	96503	-	AK122655|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_020949|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_001185056|CLDN11|5010|claudin 11##AK294087|CLDN11|5010|claudin 11##NM_005602|CLDN11|5010|claudin 11##AK312923|CLDN11|5010|claudin 11##BC013577|CLDN11|5010|claudin 11##BC107708|RPL22L1|200916|ribosomal protein L22-like 1##AL110170|RPL22L1|200916|ribosomal protein L22-like 1##BC062731|RPL22L1|200916|ribosomal protein L22-like 1##NM_001099645|RPL22L1|200916|ribosomal protein L22-like 1##AK311962|EIF5A2|56648|eukaryotic translation initiation factor 5A2##BC036072|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205258|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205259|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205260|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205261|EIF5A2|56648|eukaryotic translation initiation factor 5A2##NM_020390|EIF5A2|56648|eukaryotic translation initiation factor 5A2	1.036837	CTCF.p2:-13:0.998
chr4	89133223	89133369	reg1007707.p1	12.403	+	BC021281 NM_004827 AF151530	-53259	-	TSC_hg19_v1_chr4_+_88928803 BC112261 BC112263 NM_000297 U50928	-204488	+	AY956318 X13694 TSC_hg19_v1_chr4_+_88896900	-236383	+	TSC_hg19_v1_chr4_-_89205714 AL834271 AK314417 AK054678 AY157615 AY994097 AF351614 BC020850 BC037552	72431	-	AY435431 NM_152542 TSC_hg19_v1_chr4_-_89205908 AL834167	72607	-	TSC_hg19_v1_chr4_+_89299890 AF336798 AY653201 AY653202 AY653203 NM_001165136 NM_017912	166586	+	BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2##NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2##BC112261|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##BC112263|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##NM_000297|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##U50928|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##AY956318|SPP1|6696|secreted phosphoprotein 1##X13694|SPP1|6696|secreted phosphoprotein 1##AL834271|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AK314417|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AK054678|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY157615|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY994097|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AF351614|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC020850|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC037552|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY435431|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##NM_152542|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AL834167|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AF336798|HERC6|55008|hect domain and RLD 6##AY653201|HERC6|55008|hect domain and RLD 6##AY653202|HERC6|55008|hect domain and RLD 6##AY653203|HERC6|55008|hect domain and RLD 6##NM_001165136|HERC6|55008|hect domain and RLD 6##NM_017912|HERC6|55008|hect domain and RLD 6	0.977194	CTCF.p2:14:0.977
chr4	75858102	75858219	reg1007244.p1	12.402	+	BC011618 S55606 AB109441 NM_001729	-138377	-	BC009799 M30704 NM_001657	-377532	+	BC009799 M30704 NM_001657	-547308	+	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	212	+	TSC_hg19_v1_chr4_-_76439504 AK309555 AK308754 AB528599 AF247041 CU689096 CU690404 GQ129342 GQ129343 GQ250944 GQ250945 GQ250946 JF691538 JF691539 AB209072 AF255666 AY888047 GU937000 AF305424	581356	-	TSC_hg19_v1_chr4_-_76439614 AK091501 AX747022 BC031057 BC047393 NM_001008925 NM_001009922 NM_015436	581454	-	BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK309555|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK308754|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF247041|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129342|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129343|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250944|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250945|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250946|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AB209072|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF255666|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AY888047|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GU937000|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF305424|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK091501|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC031057|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC047393|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001008925|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001009922|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_015436|RCHY1|25898|ring finger and CHY zinc finger domain containing 1	0.913281	CTCF.p2:-3:0.913
chr7	25932583	25932693	reg1003843.p1	12.402	+	AB040290 AF330057 AF440392 NM_022150	-664558	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-712767	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-767698	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	259295	+	TSC_hg19_v1_chr7_-_26232151 BX538099	299513	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	307703	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.991915	CTCF.p2:-5:0.992
chr9	113385848	113385989	reg1005703.p1	12.402	+	TSC_hg19_v1_chr9_-_113342011 AJ619977 AY243503 AK122605 BC030816 NM_153366	-43854	-	HQ258720 AF305830 BC130549 BC130551 BC144461 BC035743 NM_001003936	-285818	-	TSC_hg19_v1_chr9_-_113018882 NM_001244938 NM_003329	-367019	-	NM_001166280 NM_001166281 NM_005592 AF006464 BC109098 BC109099 EU832778 EU832779 GQ129313	45198	+	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	414494	-	AK298590 TSC_hg19_v1_chr9_-_113801086	415115	-	AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001244938|TXN|7295|thioredoxin##NM_003329|TXN|7295|thioredoxin##NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1##AK298590|LPAR1|1902|lysophosphatidic acid receptor 1	0.953415	CTCF.p2:9:0.953
chrX	108729104	108729235	reg1006951.p1	12.402	+	NM_001522 L37378	-3884	-	NM_003604 AF007567	-749547	-	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	-1046085	+	AK023289 NM_018698 BC120984 BC120985	49845	+	NM_001242617 TSC_hg19_v1_chrX_+_108780077 AF201942 BC014888 AF212223	50914	+	AF246127 AJ277591 AJ278323 NM_001242618 TSC_hg19_v1_chrX_+_108780470	51185	+	NM_001522|GUCY2F|2986|guanylate cyclase 2F, retinal##L37378|GUCY2F|2986|guanylate cyclase 2F, retinal##NM_003604|IRS4|8471|insulin receptor substrate 4##AF007567|IRS4|8471|insulin receptor substrate 4##BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5##AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2##AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2##BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2##AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2##AF246127|NXT2|55916|nuclear transport factor 2-like export factor 2##AJ277591|NXT2|55916|nuclear transport factor 2-like export factor 2##AJ278323|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242618|NXT2|55916|nuclear transport factor 2-like export factor 2	1.355746	CTCF.p2:26:0.414	CTCF.p2:-34:0.942
chr1	145126898	145127037	reg1007506.p1	12.401	+	TSC_hg19_v1_chr1_+_145096519 CU674670 DQ892584 DQ895801	-30435	+	TSC_hg19_v1_chr1_+_145096446 NM_004892 AK289875 BC001364 AF047442	-30531	+	TSC_hg19_v1_chr1_-_145076026 CU692996 AF086451 BC110294 BC152553 BC025406 NM_022359	-51057	-	TSC_hg19_v1_chr1_+_145209107 NM_203458 BC010154 AK075065 BC090943 BC019835 AK092351 AK098372 AX747492 BC065219 AK293876 BC084572	82154	+	AY894562 AY894570 NM_001039703	166334	+	NM_145277 NM_202004 NM_213652 NM_213653 AK223575 AK092682 AK315852 AX747669 BC017926 AK096905 AK290831 AK292742 AK092692 AK124273 AX747673 BC085604	286296	+	DQ892584|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##DQ895801|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##NM_004892|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AK289875|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##BC001364|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AF047442|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AF086451|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC152553|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC025406|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_022359|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_203458|NOTCH2NL|388677|notch 2 N-terminal like##BC010154|NOTCH2NL|388677|notch 2 N-terminal like##AK075065|NOTCH2NL|388677|notch 2 N-terminal like##BC090943|NOTCH2NL|388677|notch 2 N-terminal like##BC019835|NOTCH2NL|388677|notch 2 N-terminal like##BC065219|NOTCH2NL|388677|notch 2 N-terminal like##BC084572|NOTCH2NL|388677|notch 2 N-terminal like##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8##NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10##NM_145277|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_202004|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213652|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213653|HFE2|148738|hemochromatosis type 2 (juvenile)##AK223575|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092682|HFE2|148738|hemochromatosis type 2 (juvenile)##AK315852|HFE2|148738|hemochromatosis type 2 (juvenile)##BC017926|HFE2|148738|hemochromatosis type 2 (juvenile)##AK096905|HFE2|148738|hemochromatosis type 2 (juvenile)##AK290831|HFE2|148738|hemochromatosis type 2 (juvenile)##AK292742|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092692|HFE2|148738|hemochromatosis type 2 (juvenile)##AK124273|HFE2|148738|hemochromatosis type 2 (juvenile)##BC085604|HFE2|148738|hemochromatosis type 2 (juvenile)	0.997212	CTCF.p2:-12:0.997
chr12	22596453	22596567	reg1006211.p1	12.401	+	BC117285 BC126162 BC031081 BC046158 AK315340 EU041716 NM_003034 X77922 TSC_hg19_v1_chr12_-_22487789	-108830	-	AF271388 TSC_hg19_v1_chr12_+_22199226 AF397212	-397281	+	TSC_hg19_v1_chr12_+_22199207 BC016609 NM_018686 AL832975 AK022927 AK222981	-397338	+	AB385344 AB011100 BC042498 TSC_hg19_v1_chr12_-_22697128 AK299353	100629	-	BC117143 BC143859 BC143860 BC143878 TSC_hg19_v1_chr12_-_22697430 AK295862	100879	-	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	100956	-	BC117285|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC126162|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC031081|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC046158|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AK315340|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##EU041716|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##NM_003034|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##X77922|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##BC016609|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##NM_018686|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AL832975|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK022927|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK222981|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AB011100|KIAA0528|9847|KIAA0528##BC042498|KIAA0528|9847|KIAA0528##AK299353|KIAA0528|9847|KIAA0528##BC117143|KIAA0528|9847|KIAA0528##BC143859|KIAA0528|9847|KIAA0528##BC143860|KIAA0528|9847|KIAA0528##BC143878|KIAA0528|9847|KIAA0528##AK295862|KIAA0528|9847|KIAA0528##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528	0.020197	
chr5	179228955	179229064	reg1006323.p1	12.401	+	NM_145867 BC029498 U11552 AK312033 TSC_hg19_v1_chr5_+_179221016 U09353 DQ890962 DQ894134 AB590307	-7977	+	TSC_hg19_v1_chr5_+_179159831 D83785 NM_014757 AB209135 BC047937	-69157	+	TSC_hg19_v1_chr5_+_179132740 BC050534 AB527263 CU678492 DQ890627 DQ893794 S67659	-96257	+	AK023137 NM_054013	865	-	TSC_hg19_v1_chr5_+_179233392 NM_001142298 BC001874	4366	+	AB000624 AY358984 TSC_hg19_v1_chr5_-_179233688	4648	-	NM_145867|LTC4S|4056|leukotriene C4 synthase##BC029498|LTC4S|4056|leukotriene C4 synthase##U11552|LTC4S|4056|leukotriene C4 synthase##AK312033|LTC4S|4056|leukotriene C4 synthase##U09353|LTC4S|4056|leukotriene C4 synthase##DQ890962|LTC4S|4056|leukotriene C4 synthase##DQ894134|LTC4S|4056|leukotriene C4 synthase##D83785|MAML1|9794|mastermind-like 1 (Drosophila)##NM_014757|MAML1|9794|mastermind-like 1 (Drosophila)##AB209135|MAML1|9794|mastermind-like 1 (Drosophila)##BC047937|MAML1|9794|mastermind-like 1 (Drosophila)##BC050534|CANX|821|calnexin##DQ890627|CANX|821|calnexin##DQ893794|CANX|821|calnexin##AK023137|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B##NM_054013|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B##NM_001142298|SQSTM1|8878|sequestosome 1##BC001874|SQSTM1|8878|sequestosome 1##AB000624|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B##AY358984|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B	1.579962	CTCF.p2:-12:0.801	CTCF.p2:-34:0.779
chr1	27883367	27883474	reg1004788.p2	12.400	+	TSC_hg19_v1_chr1_-_27816676 NM_001201404 NM_006990	-66744	-	TSC_hg19_v1_chr1_-_27816670 BC012329	-66749	-	TSC_hg19_v1_chr1_-_27816621 AK303011 BC032724 BC050093 BC040943	-66820	-	BC042058 NM_001029882	46701	-	BC064935 TSC_hg19_v1_chr1_-_27930394	46957	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	69250	-	NM_001201404|WASF2|10163|WAS protein family, member 2##NM_006990|WASF2|10163|WAS protein family, member 2##BC012329|WASF2|10163|WAS protein family, member 2##AK303011|WASF2|10163|WAS protein family, member 2##BC032724|WASF2|10163|WAS protein family, member 2##BC040943|WASF2|10163|WAS protein family, member 2##NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1##BC064935|AHDC1|27245|AT hook, DNA binding motif, containing 1##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	0.017372	
chr15	63759035	63759153	reg1005896.p1	12.400	+	AK315769 NM_001218 NM_206925 TSC_hg19_v1_chr15_-_63674076	-85019	-	BT006656 DQ893188 DQ896511 EU831616 EU831623 EU831703 EU831708 AF051882 BC000278 AF037335 BC011691 TSC_hg19_v1_chr15_-_63674046 AK096845 BC023981	-85102	-	NM_001145646 NM_031301 TSC_hg19_v1_chr15_+_63569803 AK291204 AL136671 BC020905 AB189172 AB197122 AF508794 AX776001 AY358698 AB528062 AM392724 AM392878 DQ891401 CU676772 AK307725	-189281	+	TSC_hg19_v1_chr15_+_63796791 AK314223	37688	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	37783	+	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	130485	+	AK315769|CA12|771|carbonic anhydrase XII##NM_001218|CA12|771|carbonic anhydrase XII##NM_206925|CA12|771|carbonic anhydrase XII##BT006656|CA12|771|carbonic anhydrase XII##DQ893188|CA12|771|carbonic anhydrase XII##DQ896511|CA12|771|carbonic anhydrase XII##EU831616|CA12|771|carbonic anhydrase XII##EU831623|CA12|771|carbonic anhydrase XII##EU831703|CA12|771|carbonic anhydrase XII##EU831708|CA12|771|carbonic anhydrase XII##AF051882|CA12|771|carbonic anhydrase XII##BC000278|CA12|771|carbonic anhydrase XII##AF037335|CA12|771|carbonic anhydrase XII##BC011691|CA12|771|carbonic anhydrase XII##AK096845|CA12|771|carbonic anhydrase XII##BC023981|CA12|771|carbonic anhydrase XII##NM_001145646|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##NM_031301|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK291204|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AL136671|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##BC020905|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB189172|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB197122|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AF508794|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AY358698|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392724|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392878|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##DQ891401|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK307725|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK314223|USP3|9960|ubiquitin specific peptidase 3##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22	0.987195	CTCF.p2:-29:0.987
chr17	36571066	36571192	reg1006629.p1	12.400	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	-63266	+	AY584611 NM_001004334	-71437	-	TSC_hg19_v1_chr17_+_36453138 AK172741 AK225031 HQ258365 BC006235	-117992	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	13576	+	TSC_hg19_v1_chr17_-_36729122 AK295027	157993	-	BC029278 TSC_hg19_v1_chr17_-_36760969	189809	-	BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##AK172741|MRPL45|84311|mitochondrial ribosomal protein L45##AK225031|MRPL45|84311|mitochondrial ribosomal protein L45##HQ258365|MRPL45|84311|mitochondrial ribosomal protein L45##BC006235|MRPL45|84311|mitochondrial ribosomal protein L45##NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1	0.993698	CTCF.p2:9:0.994
chr22	32029900	32030032	reg1007570.p1	12.399	+	TSC_hg19_v1_chr22_-_32026821 BC001482 NM_014338	-3134	-	BC033613 TSC_hg19_v1_chr22_+_32010180	-19800	+	TSC_hg19_v1_chr22_+_31892521 BC110814 AK292408 BC041101	-137420	+	TSC_hg19_v1_chr22_-_32058202 AB528208 CU013140 CU013428 CR456540 DQ656048	28242	-	NM_173566 TSC_hg19_v1_chr22_-_32146119	116162	-	NM_001242897 TSC_hg19_v1_chr22_+_32149953	119982	+	BC001482|PISD|23761|phosphatidylserine decarboxylase##NM_014338|PISD|23761|phosphatidylserine decarboxylase##BC033613|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC110814|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK292408|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC041101|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##CU013140|PISD|23761|phosphatidylserine decarboxylase##CU013428|PISD|23761|phosphatidylserine decarboxylase##CR456540|PISD|23761|phosphatidylserine decarboxylase##NM_173566|PRR14L|253143|proline rich 14-like##NM_001242897|DEPDC5|9681|DEP domain containing 5	1.531525	CTCF.p2:20:0.754	CTCF.p2:62:0.778
chr10	12028734	12028854	reg1006662.p1	12.398	+	AK056703 TSC_hg19_v1_chr10_-_11936707	-92092	-	TSC_hg19_v1_chr10_+_11865354 BC017269 BC048800 NM_153256	-163436	+	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	-244396	+	TSC_hg19_v1_chr10_-_12084777 BC054011 AK310925 BC114964 BC115737 BC090919 NM_015542 AF318574 AF301013 AK096191	56014	-	NM_080599 TSC_hg19_v1_chr10_-_12085142	56288	-	TSC_hg19_v1_chr10_+_12110952 NM_018706	82142	+	AK056703|LOC219731|219731|uncharacterized LOC219731##BC017269|C10orf47|254427|chromosome 10 open reading frame 47##BC048800|C10orf47|254427|chromosome 10 open reading frame 47##NM_153256|C10orf47|254427|chromosome 10 open reading frame 47##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK310925|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC114964|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC115737|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC090919|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##NM_015542|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AF318574|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AF301013|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AK096191|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##NM_080599|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##NM_018706|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1	0.979887	CTCF.p2:-2:0.753	CTCF.p2:-3:0.227
chr2	57724774	57724883	reg1007249.p1	12.398	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-1311919	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-1313062	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-1313623	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	548926	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	549160	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	743654	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.999609	CTCF.p2:2:1.000
chr10	80956750	80956856	reg1004934.p2	12.397	+	TSC_hg19_v1_chr10_+_80899458 AK025812	-57319	+	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	-128015	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-1163172	+	TSC_hg19_v1_chr10_+_81003207 AB033050	46327	+	AK299728 TSC_hg19_v1_chr10_+_81065901	109085	+	TSC_hg19_v1_chr10_+_81070578 BC025342 BC068072	113841	+	AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK299728|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC025342|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC068072|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.999546	CTCF.p2:-3:1.000
chr19	18499321	18499444	reg1006243.p1	12.397	+	TSC_hg19_v1_chr19_+_18496967 AB000584 AK225425 AK225431 AK291530 NM_004864 BC008962 U88323 BC000529 AF019770 U51731 BT019465	-2400	+	TSC_hg19_v1_chr19_+_18451449 AK289968 NM_017712 AK294497 BC042138 BC028063 AJ278828 AK000215	-47975	+	TSC_hg19_v1_chr19_-_18433953 AF117235 NM_001252129 NM_012321	-65416	-	BC025744 TSC_hg19_v1_chr19_-_18508433 NM_145256 BC053659 BC033825	9038	-	TSC_hg19_v1_chr19_+_18530163 NM_001009998 NM_032627	30745	+	TSC_hg19_v1_chr19_+_18530224 BC000274 AK098429	30843	+	AB000584|GDF15|9518|growth differentiation factor 15##AK225431|GDF15|9518|growth differentiation factor 15##AK291530|GDF15|9518|growth differentiation factor 15##NM_004864|GDF15|9518|growth differentiation factor 15##BC008962|GDF15|9518|growth differentiation factor 15##U88323|GDF15|9518|growth differentiation factor 15##BC000529|GDF15|9518|growth differentiation factor 15##AF019770|GDF15|9518|growth differentiation factor 15##U51731|GDF15|9518|growth differentiation factor 15##BT019465|GDF15|9518|growth differentiation factor 15##AK289968|PGPEP1|54858|pyroglutamyl-peptidase I##NM_017712|PGPEP1|54858|pyroglutamyl-peptidase I##AK294497|PGPEP1|54858|pyroglutamyl-peptidase I##BC042138|PGPEP1|54858|pyroglutamyl-peptidase I##BC028063|PGPEP1|54858|pyroglutamyl-peptidase I##AJ278828|PGPEP1|54858|pyroglutamyl-peptidase I##AK000215|PGPEP1|54858|pyroglutamyl-peptidase I##AF117235|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001252129|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012321|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC025744|LRRC25|126364|leucine rich repeat containing 25##NM_145256|LRRC25|126364|leucine rich repeat containing 25##BC053659|LRRC25|126364|leucine rich repeat containing 25##BC033825|LRRC25|126364|leucine rich repeat containing 25##NM_001009998|SSBP4|170463|single stranded DNA binding protein 4##NM_032627|SSBP4|170463|single stranded DNA binding protein 4##BC000274|SSBP4|170463|single stranded DNA binding protein 4##AK098429|SSBP4|170463|single stranded DNA binding protein 4	0.981959	CTCF.p2:4:0.982
chr8	130036309	130036405	reg1005315.p1	12.397	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1229574	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1287867	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1288032	+	AB042405 NM_031415	762776	-	BC003599 TSC_hg19_v1_chr8_-_130951934	915558	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	915649	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.870067	CTCF.p2:3:0.870
chrX	152820369	152820499	reg1008074.p1	12.397	+	NM_001001344 NM_021949 U57971 U60414 BC130009	-18822	+	DQ891898 DQ895084 AB463441 AM392603 AM393683 CU678628 BT007323 AK298756 TSC_hg19_v1_chrX_+_152770289	-50248	+	TSC_hg19_v1_chrX_+_152760466 BC002416 BC004244 J04599 AK223302	-59973	+	BC071851 AB528134 TSC_hg19_v1_chrX_-_152864584 BC001909 BC007232 BC032121	44076	-	TSC_hg19_v1_chrX_-_152864639 NM_001130997 NM_152274	44201	-	TSC_hg19_v1_chrX_+_152907894 AK314250 NM_001395 Y08302	87505	+	NM_001001344|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##NM_021949|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##U57971|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##U60414|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##BC130009|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##DQ891898|BGN|633|biglycan##DQ895084|BGN|633|biglycan##AM392603|BGN|633|biglycan##AM393683|BGN|633|biglycan##BT007323|BGN|633|biglycan##AK298756|BGN|633|biglycan##BC002416|BGN|633|biglycan##BC004244|BGN|633|biglycan##J04599|BGN|633|biglycan##AK223302|BGN|633|biglycan##BC071851|FAM58A|92002|family with sequence similarity 58, member A##BC001909|FAM58A|92002|family with sequence similarity 58, member A##BC007232|FAM58A|92002|family with sequence similarity 58, member A##BC032121|FAM58A|92002|family with sequence similarity 58, member A##NM_001130997|FAM58A|92002|family with sequence similarity 58, member A##NM_152274|FAM58A|92002|family with sequence similarity 58, member A##AK314250|DUSP9|1852|dual specificity phosphatase 9##NM_001395|DUSP9|1852|dual specificity phosphatase 9##Y08302|DUSP9|1852|dual specificity phosphatase 9	1.002919	CTCF.p2:-2:0.992
chr16	3550822	3550970	reg1007272.p1	12.394	+	NM_001080524	-5476	-	AK095819 TSC_hg19_v1_chr16_+_3533613	-17350	+	TSC_hg19_v1_chr16_+_3508044 NM_001083600 NM_024845 AK092005 AK298566 AK024216 AK130792 AK225178 AK311524 AY358543 AK302361	-42751	+	TSC_hg19_v1_chr16_+_3551003 AB089691 NM_015041 BC017070 AB014543 AB527560	95	+	AK023359 NM_024793	8997	+	TSC_hg19_v1_chr16_-_3627397 AY601811 NM_178844 AK090431 AK090476	76503	-	NM_001080524|C16orf90|646174|chromosome 16 open reading frame 90##AK095819|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##NM_001083600|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##NM_024845|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK092005|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK298566|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK024216|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK130792|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK225178|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK311524|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AY358543|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK302361|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AB089691|CLUAP1|23059|clusterin associated protein 1##NM_015041|CLUAP1|23059|clusterin associated protein 1##BC017070|CLUAP1|23059|clusterin associated protein 1##AB014543|CLUAP1|23059|clusterin associated protein 1##AK023359|CLUAP1|23059|clusterin associated protein 1##NM_024793|CLUAP1|23059|clusterin associated protein 1##AY601811|NLRC3|197358|NLR family, CARD domain containing 3##NM_178844|NLRC3|197358|NLR family, CARD domain containing 3##AK090431|NLRC3|197358|NLR family, CARD domain containing 3##AK090476|NLRC3|197358|NLR family, CARD domain containing 3	0.114959	
chr4	133563492	133563618	reg1008373.p1	12.394	+	NM_001099783	-3546274	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-3548688	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-3548965	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	506901	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	509728	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	1559363	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.742893	CTCF.p2:2:0.743
chr8	122842423	122842539	reg1006341.p1	12.394	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-188855	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1017975	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1018211	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	951430	+	BC042145 TSC_hg19_v1_chr8_+_123794000	951513	+	TSC_hg19_v1_chr8_+_123794108 AB020661	951622	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.999678	CTCF.p2:5:1.000
chr19	10209809	10209914	reg1004652.p2	12.393	+	TSC_hg19_v1_chr19_+_10197045 AL137694 CU690214	-12799	+	BC026180 TSC_hg19_v1_chr19_+_10197007 AK002148 BC010847 BC035817	-12864	+	TSC_hg19_v1_chr19_+_10196791 NM_018381	-13075	+	AY358276 BC142632 AB054064 NM_031917 AF230330	3539	-	BC171852 NM_001040664 NM_001198690 NM_020230 BC033202 TSC_hg19_v1_chr19_+_10217035 BC009833 AJ292529 CU679511 AJ300588	7128	+	NM_002566 BC073827	12343	+	AL137694|C19orf66|55337|chromosome 19 open reading frame 66##BC026180|C19orf66|55337|chromosome 19 open reading frame 66##AK002148|C19orf66|55337|chromosome 19 open reading frame 66##BC010847|C19orf66|55337|chromosome 19 open reading frame 66##BC035817|C19orf66|55337|chromosome 19 open reading frame 66##NM_018381|C19orf66|55337|chromosome 19 open reading frame 66##AY358276|ANGPTL6|83854|angiopoietin-like 6##BC142632|ANGPTL6|83854|angiopoietin-like 6##AB054064|ANGPTL6|83854|angiopoietin-like 6##NM_031917|ANGPTL6|83854|angiopoietin-like 6##AF230330|ANGPTL6|83854|angiopoietin-like 6##BC171852|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001040664|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001198690|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_020230|PPAN|56342|peter pan homolog (Drosophila)##BC033202|PPAN|56342|peter pan homolog (Drosophila)##BC009833|PPAN|56342|peter pan homolog (Drosophila)##AJ292529|PPAN|56342|peter pan homolog (Drosophila)##AJ300588|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_002566|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BC073827|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11	0.018332	
chr9	122318460	122318584	reg1007195.p1	12.393	+	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	-186864	-	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-1851835	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	-1851908	+	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	1023831	-	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	1158195	-	AF176698 TSC_hg19_v1_chr9_-_123555558	1237023	-	BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9##AF176698|FBXW2|26190|F-box and WD repeat domain containing 2	0.995374	CTCF.p2:1:0.995
chr11	85904678	85904826	reg1005790.p2	12.392	+	AK300275 NM_001206947	-123842	-	TSC_hg19_v1_chr11_-_85780127 AB210017 NM_001008660 NM_001206946 NM_007166 AK291414	-124628	-	TSC_hg19_v1_chr11_-_85780088 BC064357	-124657	-	TSC_hg19_v1_chr11_+_85955830 NM_003797 NM_152991 AK292120 AF080227	51107	+	AF070418 TSC_hg19_v1_chr11_+_85956058	51297	+	AF099032 U90651 TSC_hg19_v1_chr11_+_85956254	51465	+	AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AB210017|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001008660|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206946|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_007166|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AK291414|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC064357|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_003797|EED|8726|embryonic ectoderm development##NM_152991|EED|8726|embryonic ectoderm development##AK292120|EED|8726|embryonic ectoderm development##AF080227|EED|8726|embryonic ectoderm development##AF070418|EED|8726|embryonic ectoderm development##AF099032|EED|8726|embryonic ectoderm development##U90651|EED|8726|embryonic ectoderm development	0.822554	CTCF.p2:7:0.823
chr15	82490460	82490587	reg1008484.p1	12.392	+	AB095929 BC111545 BC036211 TSC_hg19_v1_chr15_-_82338485	-152047	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	-152157	-	AK094145 TSC_hg19_v1_chr15_-_82336883	-153640	-	BC014628 TSC_hg19_v1_chr15_-_82555043 AK300348 AK056656 BX538332	64508	-	TSC_hg19_v1_chr15_-_82555076 NM_001040610 NM_024580	64566	-	TSC_hg19_v1_chr15_+_82555158 AL833762 NM_001008226 BC144647 AK304339	64630	+	AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)##BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)##BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##BC014628|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK300348|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK056656|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BX538332|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_001040610|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_024580|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AL833762|FAM154B|283726|family with sequence similarity 154, member B##NM_001008226|FAM154B|283726|family with sequence similarity 154, member B##AK304339|FAM154B|283726|family with sequence similarity 154, member B	0.989218	CTCF.p2:10:0.989
chr5	174362998	174363120	reg1007421.p1	12.392	+	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	-211447	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-890307	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	-890348	+	NM_000794	508103	-	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	542503	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	721979	+	NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##NM_000794|DRD1|1812|dopamine receptor D1##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2	0.999889	CTCF.p2:15:1.000
chrX	129216269	129216412	reg1007363.p1	12.392	+	NM_021946 TSC_hg19_v1_chrX_+_129139243 AK074089	-77134	+	TSC_hg19_v1_chrX_+_129040144 NM_001166221 NM_006649 AK291918 AK298578 BC009649 BC001149 AK304563 BC014987 AF039694 AB590128 CU679427 DQ892549 DQ895760	-176209	+	TSC_hg19_v1_chrX_-_128977856 AL161962 AK096967 AF151847 AY358558 BC006200 BC012826 BC003128 AK001112 AY952881 NM_016032	-238512	-	TSC_hg19_v1_chrX_-_129244438 U32645	28104	-	TSC_hg19_v1_chrX_-_129244474 NM_001421	28138	-	BC017194 AK314972 NM_001127197 TSC_hg19_v1_chrX_-_129244713	28347	-	NM_021946|BCORL1|63035|BCL6 corepressor-like 1##AK074089|BCORL1|63035|BCL6 corepressor-like 1##NM_001166221|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_006649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK291918|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK298578|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC009649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC001149|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK304563|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC014987|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ892549|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ895760|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9##U32645|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001421|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##BC017194|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##AK314972|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001127197|ELF4|2000|E74-like factor 4 (ets domain transcription factor)	0.0	
chr1	114220622	114220758	reg1006109.p2	12.391	+	BC130409 BC144144 NM_001142782 NM_152900	-287216	+	TSC_hg19_v1_chr1_+_113615865 BC117368 BC117370 AB527394	-604744	+	TSC_hg19_v1_chr1_+_113615809 AK291031 CR936669 AB018349 NM_014813 AL161998	-604875	+	TSC_hg19_v1_chr1_-_114301772 NM_006608	81081	-	TSC_hg19_v1_chr1_-_114302096 BC002447	81450	-	TSC_hg19_v1_chr1_-_114354898 CU693140 CR627402	134191	-	BC130409|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##BC144144|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_001142782|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_152900|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##BC117368|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC117370|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AK291031|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##CR936669|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AB018349|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##NM_014813|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AL161998|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##NM_006608|PHTF1|10745|putative homeodomain transcription factor 1##BC002447|PHTF1|10745|putative homeodomain transcription factor 1##CR627402|RSBN1|54665|round spermatid basic protein 1	0.388492	CTCF.p2:10:0.388
chr16	57791232	57791351	reg1007368.p1	12.390	+	TSC_hg19_v1_chr16_+_57769741 AB209250	-21567	+	TSC_hg19_v1_chr16_+_57769662 NM_005886	-21646	+	TSC_hg19_v1_chr16_+_57728717 NM_032269 AK292558 BC030661 BC036667 AK093035 AX747872	-62562	+	BC041132 AK299431 AK291737 NM_001130099	40510	-	TSC_hg19_v1_chr16_-_57836370 AB209290	45080	-	TSC_hg19_v1_chr16_-_57836404 AK307846 BC001211 AK304132 NM_001130100 NM_005550	45118	-	AB209250|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1##NM_005886|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1##NM_032269|CCDC135|84229|coiled-coil domain containing 135##AK292558|CCDC135|84229|coiled-coil domain containing 135##BC030661|CCDC135|84229|coiled-coil domain containing 135##BC036667|CCDC135|84229|coiled-coil domain containing 135##AK093035|CCDC135|84229|coiled-coil domain containing 135##BC041132|KIFC3|3801|kinesin family member C3##AK299431|KIFC3|3801|kinesin family member C3##AK291737|KIFC3|3801|kinesin family member C3##NM_001130099|KIFC3|3801|kinesin family member C3##AB209290|KIFC3|3801|kinesin family member C3##AK307846|KIFC3|3801|kinesin family member C3##BC001211|KIFC3|3801|kinesin family member C3##AK304132|KIFC3|3801|kinesin family member C3##NM_001130100|KIFC3|3801|kinesin family member C3##NM_005550|KIFC3|3801|kinesin family member C3	0.999956	CTCF.p2:0:1.000
chr17	31110685	31110810	reg1006995.p1	12.390	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-295987	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-296150	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-296676	+	CU688936 AB385376 AB018270 BC146763 NM_015194	93148	-	TSC_hg19_v1_chr17_-_31204141 AK127942	93376	-	TSC_hg19_v1_chr17_-_31204196 BC030602	93466	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.994256	CTCF.p2:-22:0.994
chrX	75499539	75499662	reg1005788.p1	12.390	+	TSC_hg19_v1_chrX_+_75392955 CU674612	-106645	+	AY927529 AY927616 BC001220 NM_016500 TSC_hg19_v1_chrX_+_75392896 AF151079 BC051894	-106761	+	BC093964 BC111949 AF490509 AK094624 NM_138703	-494572	-	NM_020932 TSC_hg19_v1_chrX_+_75648083 AB046807 AF490507 AK291270 BC050588	148504	+	AK297183 TSC_hg19_v1_chrX_-_76814315	1314666	-	L33812 TSC_hg19_v1_chrX_-_76937201	1437579	-	AY927616|CXorf26|51260|chromosome X open reading frame 26##BC001220|CXorf26|51260|chromosome X open reading frame 26##NM_016500|CXorf26|51260|chromosome X open reading frame 26##BC051894|CXorf26|51260|chromosome X open reading frame 26##BC093964|MAGEE2|139599|melanoma antigen family E, 2##BC111949|MAGEE2|139599|melanoma antigen family E, 2##AF490509|MAGEE2|139599|melanoma antigen family E, 2##AK094624|MAGEE2|139599|melanoma antigen family E, 2##NM_138703|MAGEE2|139599|melanoma antigen family E, 2##NM_020932|MAGEE1|57692|melanoma antigen family E, 1##AB046807|MAGEE1|57692|melanoma antigen family E, 1##AF490507|MAGEE1|57692|melanoma antigen family E, 1##AK291270|MAGEE1|57692|melanoma antigen family E, 1##BC050588|MAGEE1|57692|melanoma antigen family E, 1##AK297183|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##L33812|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	0.581283	CTCF.p2:-26:0.581
chr10	53149237	53149352	reg1007077.p1	12.389	+	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-315003	+	TSC_hg19_v1_chr10_+_52751129 D45864	-398173	+	TSC_hg19_v1_chr10_+_52750944 AK300110	-398354	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	310053	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	924821	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	1382132	-	NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##D45864|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK300110|PRKG1|5592|protein kinase, cGMP-dependent, type I##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble	0.989423	CTCF.p2:-7:0.989
chr16	28437751	28437892	reg1007000.p1	12.389	+	BC157842 AK292155 NM_001199142	-103	-	AK055366 AK299421 AK303790 AK304500 TSC_hg19_v1_chr16_-_28415162 AK301233 AK301183 NM_001099661 BC107692 NM_001037808 NM_003752	-22664	-	DQ891632 DQ894822 AB527254 BC157849 BC071705 AK000739 AK293264 AY762099 TSC_hg19_v1_chr16_-_28415133 BC000533 BC001571	-22780	-	AF077956 AF077957 AF077958 AF077959 AF077960 AF077961 AF077962 AF077963 AF077964 AF077965 AF077966 AF077967 AF077968 AF077969 AF077970 AF077971 AF077972 AF077973 AF078169 AF015596 AF078168 AF015593 AF015602 AF015599 AF015597 AF015594 AF015595 AF015598 AF015601 AF015600 U32680 TSC_hg19_v1_chr16_-_28503318 AK294070 BC111068 AK297690 AK295500 AK302027 BC002394 BC004433 AK302138 AK294250 AK313002 NM_000086	65419	-	NM_001042432	65801	-	TSC_hg19_v1_chr16_+_28505969 NM_018690 AF141332 AF141334 BC119786 BC119788	68141	+	BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AF077956|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077957|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077958|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077959|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077960|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077961|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077962|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077963|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077964|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077965|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077966|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077967|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077968|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077969|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077970|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077971|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077972|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077973|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF078169|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015596|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF078168|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015593|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015602|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015599|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015597|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015594|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015595|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015598|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015601|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015600|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##U32680|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK294070|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##BC111068|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK297690|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK295500|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK302027|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##BC002394|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##BC004433|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK302138|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK294250|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK313002|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##NM_000086|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##NM_001042432|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##NM_018690|APOBR|55911|apolipoprotein B receptor##AF141332|APOBR|55911|apolipoprotein B receptor##AF141334|APOBR|55911|apolipoprotein B receptor##BC119786|APOBR|55911|apolipoprotein B receptor##BC119788|APOBR|55911|apolipoprotein B receptor	0.999612	CTCF.p2:19:1.000
chr17	19099806	19099953	reg1008279.p1	12.389	+	BC157869 NM_001129778	-69098	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-149593	-	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-191800	-	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	40829	+	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	166090	-	TSC_hg19_v1_chr17_+_19281077 NM_139032 NM_139033 BC007404 BC007992 U29725 AK295376	181311	+	BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1##NM_139032|MAPK7|5598|mitogen-activated protein kinase 7##NM_139033|MAPK7|5598|mitogen-activated protein kinase 7##BC007404|MAPK7|5598|mitogen-activated protein kinase 7##BC007992|MAPK7|5598|mitogen-activated protein kinase 7##U29725|MAPK7|5598|mitogen-activated protein kinase 7##AK295376|MAPK7|5598|mitogen-activated protein kinase 7	0.940264	CTCF.p2:10:0.940
chr18	45549150	45549256	reg1005368.p2	12.389	+	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	-91714	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	-91988	-	BC014840 NM_005901	-92278	-	AM988836 AK296709 NM_001039360 EF120357	114496	-	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	386506	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	516570	+	NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor	0.99977	CTCF.p2:6:1.000
chr11	115205747	115205888	reg1005647.p2	12.387	+	AY309502 TSC_hg19_v1_chr11_-_115088658	-117169	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-656569	+	AK000134 AK225236 TSC_hg19_v1_chr11_-_114466485 NM_001077639 NM_017678	-739339	-	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	169363	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	1437881	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	1452898	-	AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##AK000134|FAM55D|54827|family with sequence similarity 55, member D##AK225236|FAM55D|54827|family with sequence similarity 55, member D##NM_001077639|FAM55D|54827|family with sequence similarity 55, member D##NM_017678|FAM55D|54827|family with sequence similarity 55, member D##AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259	0.897024	CTCF.p2:-5:0.897
chr5	178921190	178921307	reg1004779.p2	12.387	+	AK308213 NM_014244 NM_021599 TSC_hg19_v1_chr5_-_178772442	-148806	-	AJ003125 AB587330 TSC_hg19_v1_chr5_-_178772362	-148892	-	TSC_hg19_v1_chr5_+_178487382 BC063312 AF525463 NM_014594	-433779	+	TSC_hg19_v1_chr5_+_178977611 AF312367 NM_025158 AF361055	56370	+	TSC_hg19_v1_chr5_+_178977843 AB209507	56594	+	AK291926 NM_001040451 NM_001040452 BC032571 AK075021 TSC_hg19_v1_chr5_+_178986802	65501	+	AK308213|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##NM_014244|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##NM_021599|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##AJ003125|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##BC063312|ZNF354C|30832|zinc finger protein 354C##AF525463|ZNF354C|30832|zinc finger protein 354C##NM_014594|ZNF354C|30832|zinc finger protein 354C##AF312367|RUFY1|80230|RUN and FYVE domain containing 1##NM_025158|RUFY1|80230|RUN and FYVE domain containing 1##AF361055|RUFY1|80230|RUN and FYVE domain containing 1##AB209507|RUFY1|80230|RUN and FYVE domain containing 1##AK291926|RUFY1|80230|RUN and FYVE domain containing 1##NM_001040451|RUFY1|80230|RUN and FYVE domain containing 1##NM_001040452|RUFY1|80230|RUN and FYVE domain containing 1##BC032571|RUFY1|80230|RUN and FYVE domain containing 1##AK075021|RUFY1|80230|RUN and FYVE domain containing 1	0.854289	CTCF.p2:-14:0.854
chr7	86568652	86568764	reg1005410.p1	12.387	+	X77748 TSC_hg19_v1_chr7_+_86274130 DQ315361 DQ315362 DQ315363	-294592	+	AK294701 TSC_hg19_v1_chr7_+_86274004 BC022496	-294717	+	AK291406 TSC_hg19_v1_chr7_+_86273870	-294837	+	AK296250 NM_152748	26538	-	TSC_hg19_v1_chr7_-_86688965 NM_001142749	120270	-	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	213005	+	X77748|GRM3|2913|glutamate receptor, metabotropic 3##DQ315361|GRM3|2913|glutamate receptor, metabotropic 3##DQ315362|GRM3|2913|glutamate receptor, metabotropic 3##DQ315363|GRM3|2913|glutamate receptor, metabotropic 3##AK294701|GRM3|2913|glutamate receptor, metabotropic 3##BC022496|GRM3|2913|glutamate receptor, metabotropic 3##AK291406|GRM3|2913|glutamate receptor, metabotropic 3##AK296250|KIAA1324L|222223|KIAA1324-like##NM_152748|KIAA1324L|222223|KIAA1324-like##NM_001142749|KIAA1324L|222223|KIAA1324-like##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1	0.0	
chr1	243912118	243912231	reg1006163.p1	12.386	+	TSC_hg19_v1_chr1_+_243419405 AK297105 AF250731	-492739	+	BC032454 TSC_hg19_v1_chr1_+_243419371 AK299249	-492803	+	TSC_hg19_v1_chr1_+_243419357 AK299212	-492819	+	AF135794 AB463341 AM392791 AM392849 AJ245709 AF124141 AK308052 BC020479 AF085234 AY005799 BC121154 NM_005465 NM_181690	94353	-	AL117525 NM_001206729	94711	-	TSC_hg19_v1_chr1_+_244214553 NM_205768	302382	+	AK297105|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF250731|SDCCAG8|10806|serologically defined colon cancer antigen 8##BC032454|SDCCAG8|10806|serologically defined colon cancer antigen 8##AK299249|SDCCAG8|10806|serologically defined colon cancer antigen 8##AK299212|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF135794|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392791|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392849|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AJ245709|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF124141|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AK308052|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC020479|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF085234|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AY005799|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC121154|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_005465|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_181690|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AL117525|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_001206729|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_205768|ZNF238|10472|zinc finger protein 238	0.985495	CTCF.p2:13:0.985
chr2	238062832	238062958	reg1007544.p1	12.385	+	TSC_hg19_v1_chr2_+_237994551 AK289891 BC067774 AK308962 U51205 BC003090 BC080617 CR456994 CU678366	-68318	+	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	-68375	+	TSC_hg19_v1_chr2_-_237994424 AK056246	-68458	-	TSC_hg19_v1_chr2_-_238322786 AK092021 AX747317 AK304870 BC144595 BC150625 BC171790	259890	-	AK308451 TSC_hg19_v1_chr2_-_238322808 BX647500	259914	-	AK303290 TSC_hg19_v1_chr2_-_238322814	259919	-	AK289891|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK308962|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##U51205|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC003090|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC080617|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##CR456994|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK092021|COL6A3|1293|collagen, type VI, alpha 3##AK304870|COL6A3|1293|collagen, type VI, alpha 3##BC144595|COL6A3|1293|collagen, type VI, alpha 3##BC150625|COL6A3|1293|collagen, type VI, alpha 3##BC171790|COL6A3|1293|collagen, type VI, alpha 3##AK308451|COL6A3|1293|collagen, type VI, alpha 3##BX647500|COL6A3|1293|collagen, type VI, alpha 3##AK303290|COL6A3|1293|collagen, type VI, alpha 3	0.010442	
chr8	141404031	141404158	reg1006883.p1	12.385	+	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	-688812	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	-1477850	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-1894988	-	AB067469 TSC_hg19_v1_chr8_-_141467841	63731	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	63764	-	AK128755 NM_031466	64583	-	AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9##AK128755|TRAPPC9|83696|trafficking protein particle complex 9##NM_031466|TRAPPC9|83696|trafficking protein particle complex 9	0.973246	CTCF.p2:17:0.973
chr3	37254631	37254743	reg1006364.p1	12.383	+	TSC_hg19_v1_chr3_-_37217813 BC017703 BC053668 AK291514 NM_001134369 NM_006309 NM_017724	-36900	-	BX648844 NM_001167617 NM_001167618 NM_001167619 AK295359 AK298583 AK316074 AK298324 AK311365 AK302807	-219385	+	TSC_hg19_v1_chr3_+_37035008 BC006850 U07418 DQ648888 U07343 AK316264 AK312609 AK222810 AB527828 EU176254 EU176562 AY517558 AK311326 AB209848	-219664	+	TSC_hg19_v1_chr3_+_37284761 BC045543 NM_001172713 NM_002078 BC050444 AK290550 BC023648 AK300192 AK307429 AB209693 U41740 X82834	30076	+	NM_178339 NM_178342 AJ493604 AJ493603	186327	+	TSC_hg19_v1_chr3_+_37493631 BC030198 D25303 NM_002207 L24158	239067	+	BC053668|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##AK291514|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##NM_001134369|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##NM_006309|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##NM_017724|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##BX648844|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##NM_001167617|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##NM_001167618|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##NM_001167619|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK295359|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK298583|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK316074|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK298324|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK311365|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK302807|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##BC006850|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##U07418|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##DQ648888|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##U07343|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK316264|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK312609|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK222810|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##EU176254|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##EU176562|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AY517558|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK311326|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AB209848|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##BC045543|GOLGA4|2803|golgin A4##NM_001172713|GOLGA4|2803|golgin A4##NM_002078|GOLGA4|2803|golgin A4##BC050444|GOLGA4|2803|golgin A4##AK290550|GOLGA4|2803|golgin A4##BC023648|GOLGA4|2803|golgin A4##AK300192|GOLGA4|2803|golgin A4##AK307429|GOLGA4|2803|golgin A4##AB209693|GOLGA4|2803|golgin A4##U41740|GOLGA4|2803|golgin A4##X82834|GOLGA4|2803|golgin A4##NM_178339|C3orf35|339883|chromosome 3 open reading frame 35##NM_178342|C3orf35|339883|chromosome 3 open reading frame 35##AJ493604|C3orf35|339883|chromosome 3 open reading frame 35##AJ493603|C3orf35|339883|chromosome 3 open reading frame 35##BC030198|ITGA9|3680|integrin, alpha 9##D25303|ITGA9|3680|integrin, alpha 9##NM_002207|ITGA9|3680|integrin, alpha 9##L24158|ITGA9|3680|integrin, alpha 9	0.999806	CTCF.p2:-13:1.000
chrX	129194572	129194712	reg1006088.p1	12.383	+	NM_021946 TSC_hg19_v1_chrX_+_129139243 AK074089	-55436	+	TSC_hg19_v1_chrX_+_129040144 NM_001166221 NM_006649 AK291918 AK298578 BC009649 BC001149 AK304563 BC014987 AF039694 AB590128 CU679427 DQ892549 DQ895760	-154511	+	TSC_hg19_v1_chrX_-_128977856 AL161962 AK096967 AF151847 AY358558 BC006200 BC012826 BC003128 AK001112 AY952881 NM_016032	-216814	-	TSC_hg19_v1_chrX_-_129244438 U32645	49802	-	TSC_hg19_v1_chrX_-_129244474 NM_001421	49836	-	BC017194 AK314972 NM_001127197 TSC_hg19_v1_chrX_-_129244713	50045	-	NM_021946|BCORL1|63035|BCL6 corepressor-like 1##AK074089|BCORL1|63035|BCL6 corepressor-like 1##NM_001166221|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_006649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK291918|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK298578|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC009649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC001149|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK304563|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC014987|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ892549|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ895760|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9##U32645|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001421|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##BC017194|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##AK314972|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001127197|ELF4|2000|E74-like factor 4 (ets domain transcription factor)	0.9993	CTCF.p2:13:0.999
chr11	61245260	61245380	reg1007780.p1	12.382	+	TSC_hg19_v1_chr11_+_61197595 BX648946 AK000494 NM_017841 BC002331	-47726	+	TSC_hg19_v1_chr11_-_61197468 NM_001136040 NM_001142565	-47855	-	BC018135 TSC_hg19_v1_chr11_-_61197448 NM_024811 AK096343 AK294578 AL833332 BX537888 AL832667	-47957	-	NM_001170753 NM_145017 TSC_hg19_v1_chr11_+_61248591 AK057333 BC043246 JF442033	3298	+	NM_001145077	30951	+	TSC_hg19_v1_chr11_-_61348549 BC125170 BC125171 NM_001252065 NM_004200	103207	-	AK000494|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##NM_017841|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##BC002331|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##NM_001136040|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##NM_001142565|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##BC018135|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##NM_024811|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK096343|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK294578|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AL833332|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##BX537888|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AL832667|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##NM_001170753|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##NM_145017|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##AK057333|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##BC043246|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##JF442033|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B##BC125170|SYT7|9066|synaptotagmin VII##BC125171|SYT7|9066|synaptotagmin VII##NM_001252065|SYT7|9066|synaptotagmin VII##NM_004200|SYT7|9066|synaptotagmin VII	0.225264	CTCF.p2:-6:0.225
chr6	104973707	104973836	reg1005762.p1	12.382	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	-3126866	+	BC037954 TSC_hg19_v1_chr6_+_101846686	-3127094	+	HM149340 TSC_hg19_v1_chr6_+_101841583	-3132265	+	TSC_hg19_v1_chr6_-_105307736 AK291760	333954	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	333991	-	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	334017	-	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	0.999604	CTCF.p2:19:1.000
chr17	28431650	28431758	reg1005292.p1	12.379	+	NM_198529 BX648689 BC137519	-163000	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	-174571	-	AK302745 AK303060 NM_001145053 AK299608	-174808	+	TSC_hg19_v1_chr17_+_28443846 AK297102 AL136806 NM_032141 AK094552 BC062425 AK313963 BC105044 BC105046 BC143417 BC143539 BC046116 BC040118 AF161358 BC016313 AB462988 AM392705 AM392719 CR533555	12137	+	NM_001045	131249	-	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	187255	-	NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AK297102|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AL136806|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_032141|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK094552|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC062425|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK313963|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105044|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105046|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143417|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143539|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC046116|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC040118|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AF161358|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC016313|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392705|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392719|NSRP1|84081|nuclear speckle splicing regulatory protein 1##CR533555|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_001045|SLC6A4|6532|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase	0.999315	CTCF.p2:-6:0.999
chr20	56089453	56089564	reg1006132.p1	12.379	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-123051	+	NM_001190472	-154631	-	AK292247 AY349350 NM_001015885	-162907	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	10693	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	46649	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	106030	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.981085	CTCF.p2:-19:0.981
chr7	1209612	1209765	reg1007529.p1	12.378	+	TSC_hg19_v1_chr7_+_1200097 AK090593	-9575	+	TSC_hg19_v1_chr7_-_1199853 NM_182491	-9849	-	AK290170 TSC_hg19_v1_chr7_-_1199815	-9874	-	TSC_hg19_v1_chr7_+_1272552 NM_001080461	62914	+	CU691530 EU832111 EU832205 AK074068 BC037988 TSC_hg19_v1_chr7_-_1499102	289345	-	TSC_hg19_v1_chr7_-_1499107 AK027124 NM_182924	289419	-	NM_182491|ZFAND2A|90637|zinc finger, AN1-type domain 2A##AK290170|ZFAND2A|90637|zinc finger, AN1-type domain 2A##NM_001080461|UNCX|340260|UNC homeobox##EU832111|MICALL2|79778|MICAL-like 2##EU832205|MICALL2|79778|MICAL-like 2##AK074068|MICALL2|79778|MICAL-like 2##BC037988|MICALL2|79778|MICAL-like 2##AK027124|MICALL2|79778|MICAL-like 2##NM_182924|MICALL2|79778|MICAL-like 2	0.960831	CTCF.p2:5:0.961
chr12	105814566	105814683	reg1006166.p1	12.377	+	AJ311378 TSC_hg19_v1_chr12_+_105724640	-89985	+	TSC_hg19_v1_chr12_+_105724468 BC013920 NM_001145199 BC067897 BC045812 BC061920 AK056999 AJ311377	-90153	+	CU689714 AB527678 DQ892107 DQ895301 TSC_hg19_v1_chr12_-_105629989 AK001521 AK290562 AK297100 BC033731 BC028008 AY113704 NM_001251904 NM_018171	-184714	-	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	718058	-	AB011109 BC152462 NM_014840	719186	-	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	827223	-	AJ311378|C12orf75|387882|chromosome 12 open reading frame 75##BC013920|C12orf75|387882|chromosome 12 open reading frame 75##NM_001145199|C12orf75|387882|chromosome 12 open reading frame 75##BC067897|C12orf75|387882|chromosome 12 open reading frame 75##BC045812|C12orf75|387882|chromosome 12 open reading frame 75##BC061920|C12orf75|387882|chromosome 12 open reading frame 75##AK056999|C12orf75|387882|chromosome 12 open reading frame 75##AJ311377|C12orf75|387882|chromosome 12 open reading frame 75##DQ892107|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##DQ895301|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK001521|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK290562|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK297100|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC033731|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC028008|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AY113704|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251904|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_018171|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4	0.999513	CTCF.p2:-9:1.000
chr15	59669060	59669218	reg1007057.p1	12.377	+	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	-4069	-	TSC_hg19_v1_chr15_-_59665065 AK291688	-4073	-	AB290177 TSC_hg19_v1_chr15_-_59665055	-4085	-	TSC_hg19_v1_chr15_+_59730403 BC022537 NM_152450 AK299220 AK307975	61211	+	TSC_hg19_v1_chr15_+_59903981 NM_004751 EF152283	234844	+	TSC_hg19_v1_chr15_+_59904093 BC017032	234967	+	BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##AB290177|MYO1E|4643|myosin IE##BC022537|FAM81A|145773|family with sequence similarity 81, member A##NM_152450|FAM81A|145773|family with sequence similarity 81, member A##AK299220|FAM81A|145773|family with sequence similarity 81, member A##AK307975|FAM81A|145773|family with sequence similarity 81, member A##NM_004751|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##EF152283|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##BC017032|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type	0.063399	
chr19	51208827	51208949	reg1007279.p1	12.376	+	TSC_hg19_v1_chr19_+_51152634 NM_001195076	-56221	+	NM_001160328 NM_001160329 BC031067 BC028379 TSC_hg19_v1_chr19_-_51143094	-65763	-	AL136594 NM_032298	-67587	-	AF163302 NM_016148	11306	-	TSC_hg19_v1_chr19_-_51223037 EU872208	14166	-	TSC_hg19_v1_chr19_+_51226620 AF020044 NM_002975 AK314141	17725	+	NM_001195076|C19orf81|342918|chromosome 19 open reading frame 81##NM_001160328|SYT3|84258|synaptotagmin III##NM_001160329|SYT3|84258|synaptotagmin III##BC031067|SYT3|84258|synaptotagmin III##BC028379|SYT3|84258|synaptotagmin III##AL136594|SYT3|84258|synaptotagmin III##NM_032298|SYT3|84258|synaptotagmin III##AF163302|SHANK1|50944|SH3 and multiple ankyrin repeat domains 1##NM_016148|SHANK1|50944|SH3 and multiple ankyrin repeat domains 1##AF020044|CLEC11A|6320|C-type lectin domain family 11, member A##NM_002975|CLEC11A|6320|C-type lectin domain family 11, member A##AK314141|CLEC11A|6320|C-type lectin domain family 11, member A	0.932574	CTCF.p2:-10:0.933
chr3	8724730	8724866	reg1005891.p2	12.376	+	TSC_hg19_v1_chr3_-_8693765 AB024705 NM_015931 BC052614	-31044	-	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	-181217	+	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	-181283	+	AK291892 NM_001234 NM_033337 BC069368 AF036365 BC102033 BC102036 BC102037 Y14747 CU686780 AF043101	50727	+	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	86288	-	TSC_hg19_v1_chr3_-_8811300 NM_000916	86486	-	AB024705|C3orf32|51066|chromosome 3 open reading frame 32##NM_015931|C3orf32|51066|chromosome 3 open reading frame 32##BC052614|C3orf32|51066|chromosome 3 open reading frame 32##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK291892|CAV3|859|caveolin 3##NM_001234|CAV3|859|caveolin 3##NM_033337|CAV3|859|caveolin 3##BC069368|CAV3|859|caveolin 3##AF036365|CAV3|859|caveolin 3##BC102033|CAV3|859|caveolin 3##BC102036|CAV3|859|caveolin 3##BC102037|CAV3|859|caveolin 3##Y14747|CAV3|859|caveolin 3##AF043101|CAV3|859|caveolin 3##X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor##NM_000916|OXTR|5021|oxytocin receptor	0.752405	CTCF.p2:-57:0.740
chr10	76782153	76782300	reg1007712.p1	12.375	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-195872	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-845639	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-845696	+	AY686755 NM_001003892 BC137321 BC137322	36079	-	AB027004 AB103375 NM_016364	77021	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	86688	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.998601	CTCF.p2:13:0.999
chr16	46942893	46943018	reg1008225.p1	12.375	+	NM_001142466 AK094971	-23853	+	TSC_hg19_v1_chr16_+_46918291 AY029173 NM_133443 BC062555	-24674	+	TSC_hg19_v1_chr16_-_46865090 CU691166 BC056676 BX647945 NM_001001436	-77867	-	TSC_hg19_v1_chr16_-_47005340 Y13350	62393	-	CU677459 AF011793 AJ001309 TSC_hg19_v1_chr16_-_47007561	64567	-	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	64640	-	NM_001142466|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##AK094971|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##AY029173|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##NM_133443|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##BC062555|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##BC056676|C16orf87|388272|chromosome 16 open reading frame 87##BX647945|C16orf87|388272|chromosome 16 open reading frame 87##NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87##Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AJ001309|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2	0.99753	CTCF.p2:11:0.890
chr17	66432630	66432788	reg1006335.p2	12.375	+	AX750577 AX750581 U79745 AK313121 AK290417 BC064832 NM_001174166 NM_004694	-145379	-	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	-177375	+	TSC_hg19_v1_chr17_+_66244233 AF208856	-188466	+	AY691424 CU691786 TSC_hg19_v1_chr17_-_66453638 BC039867 AK301830 AK000917 NM_017983	20902	-	TSC_hg19_v1_chr17_+_66508140 NM_212471 Y07642	75414	+	TSC_hg19_v1_chr17_+_66508161 BC093042	75457	+	AX750581|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G##AY691424|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##BC039867|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK301830|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK000917|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_017983|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_212471|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##Y07642|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC093042|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	0.999552	CTCF.p2:8:1.000
chr9	5590136	5590261	reg1005895.p1	12.374	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	-79535	+	TSC_hg19_v1_chr9_+_5450455 NM_014143 DQ836393 AK300470 AK314567 AF233516 BC069381	-139691	+	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	-152318	-	TSC_hg19_v1_chr9_+_5629121 NM_001135920 NM_001206557 NM_020829	38929	+	BC036853 TSC_hg19_v1_chr9_-_5630098	39892	-	AL834191 AB058718 TSC_hg19_v1_chr9_-_5833045 BC136771 BC136773 BC144404	242753	-	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_014143|CD274|29126|CD274 molecule##DQ836393|CD274|29126|CD274 molecule##AK300470|CD274|29126|CD274 molecule##AK314567|CD274|29126|CD274 molecule##AF233516|CD274|29126|CD274 molecule##BC069381|CD274|29126|CD274 molecule##BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46##NM_001135920|KIAA1432|57589|KIAA1432##NM_001206557|KIAA1432|57589|KIAA1432##NM_020829|KIAA1432|57589|KIAA1432##BC036853|C9orf46|55848|chromosome 9 open reading frame 46##AL834191|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AB058718|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136771|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136773|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC144404|ERMP1|79956|endoplasmic reticulum metallopeptidase 1	0.978822	CTCF.p2:19:0.979
chr1	157661254	157661374	reg1006974.p1	12.373	+	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	-93513	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	-139084	-	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-553031	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	9213	-	CU686705 AK301113 AY043465 AF459633 AY358130 AK303549 BC069185 NM_030764	85578	-	CU689698 AF329488 BC021274 AK315748 AK096690 BC033690 AF459634 AY043464 NM_001159397 NM_001159398 NM_052938	128571	-	AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3##AK301113|FCRL2|79368|Fc receptor-like 2##AY043465|FCRL2|79368|Fc receptor-like 2##AF459633|FCRL2|79368|Fc receptor-like 2##AY358130|FCRL2|79368|Fc receptor-like 2##AK303549|FCRL2|79368|Fc receptor-like 2##BC069185|FCRL2|79368|Fc receptor-like 2##NM_030764|FCRL2|79368|Fc receptor-like 2##AF329488|FCRL1|115350|Fc receptor-like 1##BC021274|FCRL1|115350|Fc receptor-like 1##AK315748|FCRL1|115350|Fc receptor-like 1##AK096690|FCRL1|115350|Fc receptor-like 1##BC033690|FCRL1|115350|Fc receptor-like 1##AF459634|FCRL1|115350|Fc receptor-like 1##AY043464|FCRL1|115350|Fc receptor-like 1##NM_001159397|FCRL1|115350|Fc receptor-like 1##NM_001159398|FCRL1|115350|Fc receptor-like 1##NM_052938|FCRL1|115350|Fc receptor-like 1	0.381868	CTCF.p2:-8:0.382
chr15	65481619	65481757	reg1007480.p1	12.373	+	TSC_hg19_v1_chr15_-_65477676 AL136922 AK308133 AK292316 AK310614	-4002	-	TSC_hg19_v1_chr15_-_65477471 BC130373 BC136487 BC144166 AJ006267 NM_006660	-4187	-	TSC_hg19_v1_chr15_-_65426147 AK225816 AK303203 BC131704 AK096970 BC092464 NM_005707	-55758	-	BC035776 AF035408 AY358904 AK225652 AK225926 AK313352 TSC_hg19_v1_chr15_-_65503811 NM_003613	22124	-	BC006389 NM_017851 TSC_hg19_v1_chr15_-_65579223 AK000516	97472	-	BC042054 TSC_hg19_v1_chr15_-_65670341 BC067107 NM_004884	188663	-	AL136922|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK308133|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK292316|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK310614|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC130373|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC136487|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC144166|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AJ006267|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##NM_006660|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK225816|PDCD7|10081|programmed cell death 7##AK303203|PDCD7|10081|programmed cell death 7##BC131704|PDCD7|10081|programmed cell death 7##AK096970|PDCD7|10081|programmed cell death 7##BC092464|PDCD7|10081|programmed cell death 7##NM_005707|PDCD7|10081|programmed cell death 7##BC035776|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AF035408|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AY358904|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225652|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225926|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK313352|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##NM_003613|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##BC006389|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##NM_017851|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##AK000516|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3	0.973718	CTCF.p2:-20:0.974
chr5	170171614	170171734	reg1005944.p1	12.373	+	TSC_hg19_v1_chr5_+_169931023 BC035032 NM_001034837 NM_014592	-240639	+	BC025707 NM_004137 AK313979	-355027	-	TSC_hg19_v1_chr5_+_169816493 AK311026	-355178	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	39080	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	117257	+	TSC_hg19_v1_chr5_+_170289029 AJ271459 AJ288952 AJ288953 AJ288954 AJ288955 BC030953 AF222747 AB527205 AL832980	117348	+	BC035032|KCNIP1|30820|Kv channel interacting protein 1##NM_001034837|KCNIP1|30820|Kv channel interacting protein 1##NM_014592|KCNIP1|30820|Kv channel interacting protein 1##BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17##AJ271459|RANBP17|64901|RAN binding protein 17##AJ288952|RANBP17|64901|RAN binding protein 17##AJ288953|RANBP17|64901|RAN binding protein 17##AJ288954|RANBP17|64901|RAN binding protein 17##AJ288955|RANBP17|64901|RAN binding protein 17##BC030953|RANBP17|64901|RAN binding protein 17##AF222747|RANBP17|64901|RAN binding protein 17##AL832980|RANBP17|64901|RAN binding protein 17	0.831956	CTCF.p2:-9:0.832
chr5	6837769	6837888	reg1006060.p1	12.373	+	AK308405 NM_001171806 AK303516	-91706	+	NM_001171805 NM_006999 AF089896 BC084567	-123078	+	M32313 TSC_hg19_v1_chr5_+_6633683 BT006834 CU679027 DQ891537 DQ894726	-204154	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	558440	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	1013431	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	1031304	-	AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##M32313|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##BT006834|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##DQ891537|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##DQ894726|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3	0.995362	CTCF.p2:-7:0.995
chr9	131901548	131901683	reg1008471.p1	12.373	+	TSC_hg19_v1_chr9_+_131873871 AK297202 AB464103 BT020119 CU678032 DQ892154 DQ894879 DQ895349 AK307424 NM_001193397	-27756	+	TSC_hg19_v1_chr9_+_131873696 AK302897 CR749810 X73478 AK222788	-27957	+	NM_178000 NM_178001 NM_178003 TSC_hg19_v1_chr9_+_131873614 AK302043	-28011	+	TSC_hg19_v1_chr9_+_131901694 AK293296	104	+	AK310328 TSC_hg19_v1_chr9_+_131902359	695	+	TSC_hg19_v1_chr9_-_131940534 BC064028	38892	-	AK297202|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##BT020119|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ892154|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ894879|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ895349|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK307424|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##NM_001193397|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK302897|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##CR749810|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##X73478|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK222788|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##NM_178000|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##NM_178001|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##NM_178003|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK302043|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK310328|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##BC064028|IER5L|389792|immediate early response 5-like	0.99869	CTCF.p2:-14:0.999
chr20	23422589	23422718	reg1007052.p1	12.372	+	AY707749 NM_138283	-2332	+	CU687460 EU832496 EU832577 TSC_hg19_v1_chr20_-_23402111 BC008463 AK294703 BC060840 AK124876 BC047426 AK307709 BC026310 AK296385 BX648330 AK295791 NM_022080	-20557	-	AB100265 AB463678 BC125188 BC154409 NM_022482	-77633	+	BC121079 BC121080 AF335480 AF335481 NM_080830 NM_130794	10826	-	AF059244 NM_005492	49112	+	AY358615 AK312112 BC029656 NM_080610	126703	-	AY707749|CSTL1|128817|cystatin-like 1##NM_138283|CSTL1|128817|cystatin-like 1##EU832496|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##EU832577|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##BC008463|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##AK294703|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##BC060840|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##AK124876|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##BC047426|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##AK307709|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##BC026310|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##AK296385|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##BX648330|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##AK295791|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##NM_022080|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1##BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1##BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1##NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1##BC121079|CST11|140880|cystatin 11##BC121080|CST11|140880|cystatin 11##AF335480|CST11|140880|cystatin 11##AF335481|CST11|140880|cystatin 11##NM_080830|CST11|140880|cystatin 11##NM_130794|CST11|140880|cystatin 11##AF059244|CST8|10047|cystatin 8 (cystatin-related epididymal specific)##NM_005492|CST8|10047|cystatin 8 (cystatin-related epididymal specific)##AY358615|CST9L|128821|cystatin 9-like##AK312112|CST9L|128821|cystatin 9-like##BC029656|CST9L|128821|cystatin 9-like##NM_080610|CST9L|128821|cystatin 9-like	0.985451	CTCF.p2:-7:0.985
chr22	50690702	50690824	reg1007543.p1	12.372	+	TSC_hg19_v1_chr22_-_50689784 AF426160 NM_001159286 NM_032019	-948	-	TSC_hg19_v1_chr22_-_50689695 BC094734	-1070	-	AF393962 AF407272 AF407273 AY450395 CU013015 CU013303 AB463069 BC125082 BC125083 CR456465 TSC_hg19_v1_chr22_-_50689653 BC032049	-1200	-	AK307421 TSC_hg19_v1_chr22_-_50699740 AK294422 BX640648 AK289770	8976	-	CU677413 CU013115 CU013403 DQ892787 DQ896034 AB587470 X79483 AK308768 CR456515 BC015741 NM_002969 TSC_hg19_v1_chr22_-_50700113 Y10487	9345	-	AF001008 CU013114 CU013402 AB463125 DQ891728 DQ894905 CR456514 U92268 AF001174 Y14440 AF031135 U53442 AK291845 BC027933 NM_002751 AK299745	17993	-	AF426160|HDAC10|83933|histone deacetylase 10##NM_001159286|HDAC10|83933|histone deacetylase 10##NM_032019|HDAC10|83933|histone deacetylase 10##BC094734|HDAC10|83933|histone deacetylase 10##AF393962|HDAC10|83933|histone deacetylase 10##AF407272|HDAC10|83933|histone deacetylase 10##AF407273|HDAC10|83933|histone deacetylase 10##AY450395|HDAC10|83933|histone deacetylase 10##CU013015|HDAC10|83933|histone deacetylase 10##CU013303|HDAC10|83933|histone deacetylase 10##BC125082|HDAC10|83933|histone deacetylase 10##BC125083|HDAC10|83933|histone deacetylase 10##CR456465|HDAC10|83933|histone deacetylase 10##BC032049|HDAC10|83933|histone deacetylase 10##AK307421|MAPK12|6300|mitogen-activated protein kinase 12##AK294422|MAPK12|6300|mitogen-activated protein kinase 12##BX640648|MAPK12|6300|mitogen-activated protein kinase 12##AK289770|MAPK12|6300|mitogen-activated protein kinase 12##CU013115|MAPK12|6300|mitogen-activated protein kinase 12##CU013403|MAPK12|6300|mitogen-activated protein kinase 12##DQ892787|MAPK12|6300|mitogen-activated protein kinase 12##DQ896034|MAPK12|6300|mitogen-activated protein kinase 12##X79483|MAPK12|6300|mitogen-activated protein kinase 12##AK308768|MAPK12|6300|mitogen-activated protein kinase 12##CR456515|MAPK12|6300|mitogen-activated protein kinase 12##BC015741|MAPK12|6300|mitogen-activated protein kinase 12##NM_002969|MAPK12|6300|mitogen-activated protein kinase 12##Y10487|MAPK12|6300|mitogen-activated protein kinase 12##AF001008|MAPK11|5600|mitogen-activated protein kinase 11##CU013114|MAPK11|5600|mitogen-activated protein kinase 11##CU013402|MAPK11|5600|mitogen-activated protein kinase 11##DQ891728|MAPK11|5600|mitogen-activated protein kinase 11##DQ894905|MAPK11|5600|mitogen-activated protein kinase 11##CR456514|MAPK11|5600|mitogen-activated protein kinase 11##U92268|MAPK11|5600|mitogen-activated protein kinase 11##AF001174|MAPK11|5600|mitogen-activated protein kinase 11##Y14440|MAPK11|5600|mitogen-activated protein kinase 11##AF031135|MAPK11|5600|mitogen-activated protein kinase 11##U53442|MAPK11|5600|mitogen-activated protein kinase 11##AK291845|MAPK11|5600|mitogen-activated protein kinase 11##BC027933|MAPK11|5600|mitogen-activated protein kinase 11##NM_002751|MAPK11|5600|mitogen-activated protein kinase 11##AK299745|MAPK11|5600|mitogen-activated protein kinase 11	0.998378	CTCF.p2:0:0.998
chr6	27046734	27046895	reg1006588.p1	12.372	+	TSC_hg19_v1_chr6_-_26659967 NM_001242797 NM_001242798 NM_001242799 NM_024639	-386862	-	TSC_hg19_v1_chr6_+_26597203 NM_013375 BC066313 BC048812 AB027258 AB463399 CU688138 CU690582 EU446795	-449607	+	TSC_hg19_v1_chr6_+_26538630 NM_006353 AK311841 BC001282	-508184	+	AB591038 BC014312 TSC_hg19_v1_chr6_-_27100575 NM_021058 AK311849	53751	-	TSC_hg19_v1_chr6_+_27100821 AK312124 NM_021064 L19778 BC067782 BC016677 AB590259 DQ891024 DQ894204 DQ894286	54003	+	BC016336 BC075806 AB590709 BC066250 BC067496 BC067497 HQ257982 NM_003495	60259	+	NM_001242797|ZNF322|79692|zinc finger protein 322##NM_001242798|ZNF322|79692|zinc finger protein 322##NM_001242799|ZNF322|79692|zinc finger protein 322##NM_024639|ZNF322|79692|zinc finger protein 322##NM_013375|ABT1|29777|activator of basal transcription 1##BC066313|ABT1|29777|activator of basal transcription 1##BC048812|ABT1|29777|activator of basal transcription 1##AB027258|ABT1|29777|activator of basal transcription 1##EU446795|ABT1|29777|activator of basal transcription 1##NM_006353|HMGN4|10473|high mobility group nucleosomal binding domain 4##AK311841|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC001282|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC014312|HIST1H2BJ|8970|histone cluster 1, H2bj##NM_021058|HIST1H2BJ|8970|histone cluster 1, H2bj##AK311849|HIST1H2BJ|8970|histone cluster 1, H2bj##AK312124|HIST1H2AG|8969|histone cluster 1, H2ag##NM_021064|HIST1H2AG|8969|histone cluster 1, H2ag##L19778|HIST1H2AG|8969|histone cluster 1, H2ag##BC067782|HIST1H2AG|8969|histone cluster 1, H2ag##BC016677|HIST1H2AG|8969|histone cluster 1, H2ag##DQ891024|HIST1H2AG|8969|histone cluster 1, H2ag##DQ894204|HIST1H2AG|8969|histone cluster 1, H2ag##DQ894286|HIST1H2AG|8969|histone cluster 1, H2ag##BC016336|HIST1H4I|8294|histone cluster 1, H4i##BC075806|HIST1H4I|8294|histone cluster 1, H4i##BC066250|HIST1H4I|8294|histone cluster 1, H4i##BC067496|HIST1H4I|8294|histone cluster 1, H4i##BC067497|HIST1H4I|8294|histone cluster 1, H4i##HQ257982|HIST2H4B|554313|histone cluster 2, H4b##NM_003495|HIST1H4I|8294|histone cluster 1, H4i	0.969014	CTCF.p2:39:0.969
chr11	3476214	3476335	reg1007580.p1	12.371	+	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	-75895	-	AK293940 NM_001039165	-222659	-	AB529240 AY255583 NM_001164377	-236232	-	NM_053017 NM_001079536 Y16835	187240	-	BC017828 BC069102 NM_004314 S74683 BC111729	190096	+	AB528800 AJ278118 AJ295237 BC136250 BC143303 AF199235 NM_020402	216304	-	BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195##AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##NM_053017|ART5|116969|ADP-ribosyltransferase 5##NM_001079536|ART5|116969|ADP-ribosyltransferase 5##Y16835|ART5|116969|ADP-ribosyltransferase 5##BC017828|ART1|417|ADP-ribosyltransferase 1##BC069102|ART1|417|ADP-ribosyltransferase 1##NM_004314|ART1|417|ADP-ribosyltransferase 1##S74683|ART1|417|ADP-ribosyltransferase 1##BC111729|ART1|417|ADP-ribosyltransferase 1##AJ278118|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AJ295237|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC136250|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC143303|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AF199235|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##NM_020402|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10	0.995288	CTCF.p2:-18:0.995
chr1	156767230	156767356	reg1006310.p1	12.371	+	TSC_hg19_v1_chr1_+_156737326 AK289872 BC010450 BC004913 X97124	-29946	+	NM_005973 TSC_hg19_v1_chr1_+_156737306	-30001	+	NM_001126051 AK096411 AK304468 NM_001126050	-45162	-	AK126428 NM_001007792	18212	+	AY763098 NM_001161443	18645	-	AB528908 EU832614 EU832686 AF097744 AK222737 AY763100 AF051325 AJ000553 AY763099 BC012107 AK313706 NM_001161441 NM_001161442 NM_001161444 NM_003975	19276	-	AK289872|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##BC010450|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##BC004913|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##X97124|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##NM_005973|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##NM_001126051|HDGF|3068|hepatoma-derived growth factor##AK096411|HDGF|3068|hepatoma-derived growth factor##AK304468|HDGF|3068|hepatoma-derived growth factor##NM_001126050|HDGF|3068|hepatoma-derived growth factor##AK126428|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001007792|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AY763098|SH2D2A|9047|SH2 domain containing 2A##NM_001161443|SH2D2A|9047|SH2 domain containing 2A##EU832614|SH2D2A|9047|SH2 domain containing 2A##EU832686|SH2D2A|9047|SH2 domain containing 2A##AF097744|SH2D2A|9047|SH2 domain containing 2A##AK222737|SH2D2A|9047|SH2 domain containing 2A##AY763100|SH2D2A|9047|SH2 domain containing 2A##AF051325|SH2D2A|9047|SH2 domain containing 2A##AJ000553|SH2D2A|9047|SH2 domain containing 2A##AY763099|SH2D2A|9047|SH2 domain containing 2A##BC012107|SH2D2A|9047|SH2 domain containing 2A##AK313706|SH2D2A|9047|SH2 domain containing 2A##NM_001161441|SH2D2A|9047|SH2 domain containing 2A##NM_001161442|SH2D2A|9047|SH2 domain containing 2A##NM_001161444|SH2D2A|9047|SH2 domain containing 2A##NM_003975|SH2D2A|9047|SH2 domain containing 2A	0.079302	
chr16	50244562	50244680	reg1005767.p1	12.371	+	TSC_hg19_v1_chr16_+_50186838 AK300918 NM_001040284 NM_001040285	-57786	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	-144661	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	-144728	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	55855	+	TSC_hg19_v1_chr16_+_50308041 BC039891	63432	+	NM_001114 D25538	77202	+	AK300918|PAPD5|64282|PAP associated domain containing 5##NM_001040284|PAPD5|64282|PAP associated domain containing 5##NM_001040285|PAPD5|64282|PAP associated domain containing 5##AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK093706|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7	0.946596	CTCF.p2:8:0.947
chr20	35898222	35898336	reg1005603.p1	12.371	+	X00094 BC098109 BC098161 BC099727 NM_001184731 NM_021081	-12992	-	AB527120 AM392522 AM392819 TSC_hg19_v1_chr20_-_35807952 BC030006 BC057767 NM_152503 NM_213631 NM_213632 AK093432 AX748122	-90342	-	TSC_hg19_v1_chr20_+_35807749 AK308683 CR456899 DQ892347 DQ895552	-90526	+	TSC_hg19_v1_chr20_+_35918057 AK292971 NM_001003897 NM_022077	19756	+	TSC_hg19_v1_chr20_+_35918065 BC016822 BC014672	19806	+	TSC_hg19_v1_chr20_+_35973086 AF272982 NM_005417	74814	+	X00094|GHRH|2691|growth hormone releasing hormone##BC098109|GHRH|2691|growth hormone releasing hormone##BC098161|GHRH|2691|growth hormone releasing hormone##BC099727|GHRH|2691|growth hormone releasing hormone##NM_001184731|GHRH|2691|growth hormone releasing hormone##NM_021081|GHRH|2691|growth hormone releasing hormone##AM392522|C20orf132|140699|chromosome 20 open reading frame 132##AM392819|C20orf132|140699|chromosome 20 open reading frame 132##BC030006|C20orf132|140699|chromosome 20 open reading frame 132##BC057767|C20orf132|140699|chromosome 20 open reading frame 132##NM_152503|C20orf132|140699|chromosome 20 open reading frame 132##NM_213631|C20orf132|140699|chromosome 20 open reading frame 132##NM_213632|C20orf132|140699|chromosome 20 open reading frame 132##AK093432|C20orf132|140699|chromosome 20 open reading frame 132##AK308683|RPN2|6185|ribophorin II##CR456899|RPN2|6185|ribophorin II##DQ892347|RPN2|6185|ribophorin II##DQ895552|RPN2|6185|ribophorin II##AK292971|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_001003897|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_022077|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC016822|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC014672|MANBAL|63905|mannosidase, beta A, lysosomal-like##AF272982|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005417|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	0.075903	
chr2	113448553	113448686	reg1007049.p1	12.371	+	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	-45099	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-106430	+	TSC_hg19_v1_chr2_+_113342023 AK024631 BC004498 NM_032309 AK312219	-106581	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	73603	-	NM_000575 BC035169	94353	-	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	145725	-	NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BC004498|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_032309|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK312219|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta	0.103763	
chr21	30117494	30117607	reg1006328.p1	12.370	+	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	-1778111	-	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	-1899838	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	-1900079	-	TSC_hg19_v1_chr21_-_30257688 AB590951 BC011554 AK314100 AK225515 AF139682 NM_013240 NM_182749	140113	-	BC007525 AB384515 TSC_hg19_v1_chr21_-_30365185 AF161350 AB018257 BC150284 AB621822 BC029371 BC140790 AK001915 BC031633 NM_015565	247643	-	CU676110 TSC_hg19_v1_chr21_-_30391645 AF212232 BC012546 Y19009 BC017912 AK000056 AL355727 NM_016940 AK223357	274097	-	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##BC007525|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF161350|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AB018257|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC150284|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC029371|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC140790|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AK001915|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC031633|LTN1|26046|listerin E3 ubiquitin protein ligase 1##NM_015565|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF212232|RWDD2B|10069|RWD domain containing 2B##BC012546|RWDD2B|10069|RWD domain containing 2B##Y19009|RWDD2B|10069|RWD domain containing 2B##BC017912|RWDD2B|10069|RWD domain containing 2B##AK000056|RWDD2B|10069|RWD domain containing 2B##AL355727|RWDD2B|10069|RWD domain containing 2B##NM_016940|RWDD2B|10069|RWD domain containing 2B##AK223357|RWDD2B|10069|RWD domain containing 2B	0.483385	CTCF.p2:13:0.483
chr6	3126706	3126836	reg1007335.p1	12.370	+	TSC_hg19_v1_chr6_+_3118961 AK297518 NM_004332 AK314909 AL832502 AJ617684 X81372	-7820	+	BC126254 BC126256 HQ258488 NM_003804 U50062 AK304701	-49707	+	AK314176 TSC_hg19_v1_chr6_+_3064200 AB208926	-62605	+	AY159127 CR541958 CU674602 AB528583 DQ892343 DQ895718 BC001194 TSC_hg19_v1_chr6_-_3157779 BC018780 X79535 AK308772 AK312621 NM_001069	30975	-	BT019930 CR456788 CU674662 BC063610 TSC_hg19_v1_chr6_-_3227888 AK308806 AK289433 AK297568 BC001352 NM_178012	101100	-	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	132387	+	AK297518|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##NM_004332|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AK314909|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AL832502|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AJ617684|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##X81372|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK314176|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AB208926|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AY159127|TUBB2A|7280|tubulin, beta 2A class IIa##CR541958|TUBB2A|7280|tubulin, beta 2A class IIa##DQ892343|TUBB2A|7280|tubulin, beta 2A class IIa##DQ895718|TUBB2A|7280|tubulin, beta 2A class IIa##BC001194|TUBB2A|7280|tubulin, beta 2A class IIa##BC018780|TUBB2A|7280|tubulin, beta 2A class IIa##X79535|TUBB2A|7280|tubulin, beta 2A class IIa##AK312621|TUBB2A|7280|tubulin, beta 2A class IIa##NM_001069|TUBB2A|7280|tubulin, beta 2A class IIa##BT019930|TUBB2B|347733|tubulin, beta 2B class IIb##CR456788|TUBB2B|347733|tubulin, beta 2B class IIb##BC063610|TUBB2B|347733|tubulin, beta 2B class IIb##AK308806|TUBB2B|347733|tubulin, beta 2B class IIb##AK289433|TUBB2B|347733|tubulin, beta 2B class IIb##AK297568|TUBB2B|347733|tubulin, beta 2B class IIb##BC001352|TUBB2B|347733|tubulin, beta 2B class IIb##NM_178012|TUBB2B|347733|tubulin, beta 2B class IIb##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	0.996481	CTCF.p2:-1:0.996
chr11	134114625	134114738	reg1003036.p1	12.369	+	TSC_hg19_v1_chr11_+_134094573 BC014128 BC009747	-20073	+	TSC_hg19_v1_chr11_+_134094548 AF452718 NM_052875	-20129	+	TSC_hg19_v1_chr11_+_134094486 BC098386	-20190	+	AK308498 AK308498 AF182413 TSC_hg19_v1_chr11_-_134123259 AF161493 AF059619 BC093074 AK311024 BC006978 NM_001037304 NM_001037305 NM_014174 NM_199297 NM_199298	8518	-	AF126245 AK309838 NM_014384 TSC_hg19_v1_chr11_+_134123461 AK299492 AK301921 AK299795 AK074640 AK000359 AK315980 AK125373 BC001964 AK303569 AK309051 AK309051 CU674960 DQ891093 DQ894275	8769	+	BC011001 NM_001080407	31593	+	BC014128|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##BC009747|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##AF452718|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##NM_052875|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##BC098386|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##AK308498|THYN1|29087|thymocyte nuclear protein 1##AK308498|THYN1|29087|thymocyte nuclear protein 1##AF182413|THYN1|29087|thymocyte nuclear protein 1##AF161493|THYN1|29087|thymocyte nuclear protein 1##AF059619|THYN1|29087|thymocyte nuclear protein 1##BC093074|THYN1|29087|thymocyte nuclear protein 1##AK311024|THYN1|29087|thymocyte nuclear protein 1##BC006978|THYN1|29087|thymocyte nuclear protein 1##NM_001037304|THYN1|29087|thymocyte nuclear protein 1##NM_001037305|THYN1|29087|thymocyte nuclear protein 1##NM_014174|THYN1|29087|thymocyte nuclear protein 1##NM_199297|THYN1|29087|thymocyte nuclear protein 1##NM_199298|THYN1|29087|thymocyte nuclear protein 1##AF126245|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK309838|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##NM_014384|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK299492|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK301921|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK299795|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK074640|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK000359|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK125373|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##BC001964|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK303569|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK309051|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK309051|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##DQ891093|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##DQ894275|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##BC011001|GLB1L3|112937|galactosidase, beta 1-like 3##NM_001080407|GLB1L3|112937|galactosidase, beta 1-like 3	0.913222	CTCF.p2:0:0.883
chr2	241790754	241790870	reg1007443.p1	12.369	+	BC064906 TSC_hg19_v1_chr2_-_241759637 AK307119 AB621817 AB210029 AB290172 NM_001244008 NM_004321	-31137	-	AB040748 BC041460 NM_198998	-159551	+	BC157895 BC171912 BC139748 NM_001102467 BC041460	-168497	-	NM_000030 X53414 BC132819 D13368 S71388 AK315331 TSC_hg19_v1_chr2_+_241808251 AK292754 AK298420 AB292648 X56092 AF348451 AK298400 AK316495	17456	+	BC125154 BC125155 AK026324 NM_024861 AK096434	40607	-	AK056601 NM_001085437	44760	-	BC064906|KIF1A|547|kinesin family member 1A##AK307119|KIF1A|547|kinesin family member 1A##AB210029|KIF1A|547|kinesin family member 1A##AB290172|KIF1A|547|kinesin family member 1A##NM_001244008|KIF1A|547|kinesin family member 1A##NM_004321|KIF1A|547|kinesin family member 1A##AB040748|AQP12A|375318|aquaporin 12A##BC041460|AQP12B|653437|aquaporin 12B##NM_198998|AQP12A|375318|aquaporin 12A##BC157895|AQP12B|653437|aquaporin 12B##BC171912|AQP12B|653437|aquaporin 12B##BC139748|AQP12B|653437|aquaporin 12B##NM_001102467|AQP12B|653437|aquaporin 12B##BC041460|AQP12B|653437|aquaporin 12B##NM_000030|AGXT|189|alanine-glyoxylate aminotransferase##X53414|AGXT|189|alanine-glyoxylate aminotransferase##BC132819|AGXT|189|alanine-glyoxylate aminotransferase##D13368|AGXT|189|alanine-glyoxylate aminotransferase##AK315331|AGXT|189|alanine-glyoxylate aminotransferase##AK292754|AGXT|189|alanine-glyoxylate aminotransferase##AK298420|AGXT|189|alanine-glyoxylate aminotransferase##AB292648|AGXT|189|alanine-glyoxylate aminotransferase##X56092|AGXT|189|alanine-glyoxylate aminotransferase##AF348451|AGXT|189|alanine-glyoxylate aminotransferase##AK298400|AGXT|189|alanine-glyoxylate aminotransferase##AK316495|AGXT|189|alanine-glyoxylate aminotransferase##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54##AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54	0.928411	CTCF.p2:-3:0.878
chr5	9544698	9544812	reg1005906.p2	12.369	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-1675445	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-1675496	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-1675623	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	1439	-	BC095521 NM_019599	85707	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	705229	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.984962	CTCF.p2:9:0.985
chr12	123528146	123528248	reg1005857.p1	12.368	+	AB040953 TSC_hg19_v1_chr12_-_123466210	-61965	-	TSC_hg19_v1_chr12_+_123465384 AK027285	-62781	+	EU624491 AF267748 TSC_hg19_v1_chr12_+_123465249 AB035384 AK315759 BC001958 BC015569	-63032	+	BC141813 TSC_hg19_v1_chr12_-_123590060	61858	-	NM_020845	66777	-	AB040890 TSC_hg19_v1_chr12_-_123635595	107301	-	AB040953|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##AK027285|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##EU624491|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##AF267748|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##AB035384|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##AK315759|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##BC001958|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##BC015569|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##BC141813|PITPNM2|57605|phosphatidylinositol transfer protein, membrane-associated 2##NM_020845|PITPNM2|57605|phosphatidylinositol transfer protein, membrane-associated 2##AB040890|PITPNM2|57605|phosphatidylinositol transfer protein, membrane-associated 2	0.995238	CTCF.p2:-24:0.995
chr3	150213475	150213607	reg1006319.p1	12.368	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	-86778	+	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	-87469	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-524461	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	50429	-	AB022427 TSC_hg19_v1_chr3_-_150264228	50640	-	BC112364 BC112365 TSC_hg19_v1_chr3_-_150264234 AL136807	50707	-	BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC012363|LOC646903|646903|uncharacterized LOC646903##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AB022427|SERP1|27230|stress-associated endoplasmic reticulum protein 1##BC112364|SERP1|27230|stress-associated endoplasmic reticulum protein 1##BC112365|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AL136807|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.952721	CTCF.p2:12:0.953
chr3	32416671	32416803	reg1008214.p1	12.367	+	TSC_hg19_v1_chr3_+_32280215 BC041390	-136518	+	TSC_hg19_v1_chr3_+_32280171 AF474370 AY598783 NM_178868	-136572	+	TSC_hg19_v1_chr3_+_32148151 BC028726 AK292808 AB385275	-268569	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	16432	+	TSC_hg19_v1_chr3_+_32433370 BC010116 AY174113 DQ132881 AK308878	16666	+	CR457231 TSC_hg19_v1_chr3_-_32544290	127535	-	BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AF474370|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AY598783|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##NM_178868|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##BC028726|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AK292808|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##BC010116|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AY174113|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##DQ132881|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AK308878|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##CR457231|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6	0.995093	CTCF.p2:0:0.995
chr6	100927443	100927578	reg1006255.p2	12.367	+	NM_005068 U70212	-15960	-	AK123634 NM_001040179 NM_032503 AF347063	-485400	-	AY004253 NM_021620	-872861	+	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	401590	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	401706	-	TSC_hg19_v1_chr6_-_101329241 BC026066 AK299117	401733	-	NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC026066|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK299117|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.036776	
chr7	139875063	139875181	reg1004812.p1	12.367	+	BC081541 NM_022750	-111602	-	AL137255 TSC_hg19_v1_chr7_-_139762712 BC044660	-112511	-	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	-346030	+	TSC_hg19_v1_chr7_-_139876751 AB528281 AK131497 NM_030647	1740	-	TSC_hg19_v1_chr7_+_139877154 AK026372	2034	+	AL136583 AL136583 TSC_hg19_v1_chr7_-_140098295 AK299276 BC028380 BC028380 BC046567 BC046567 AK296543 AK300265 AK074823 AK074823 NM_032295 NM_207113	223177	-	BC081541|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##NM_022750|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##AL137255|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##BC044660|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK131497|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)##NM_030647|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)##AK026372|LOC100134229|100134229|uncharacterized LOC100134229##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK299276|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK296543|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK300265|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_032295|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_207113|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	0.267184	CTCF.p2:-6:0.267
chr1	6498202	6498329	reg1008113.p1	12.366	+	TSC_hg19_v1_chr1_+_6484835 AL136880 NM_031475	-13434	+	AB463714 BC132698 BC136963 BC142687 TSC_hg19_v1_chr1_-_6479976 AK091122 NM_019089	-18335	-	BC017365 AK057168 NM_007274	-44466	-	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	27937	-	TSC_hg19_v1_chr1_-_6545530 AK299523	47260	-	AB097001 NM_001042665 TSC_hg19_v1_chr1_-_6546016	47749	-	AL136880|ESPN|83715|espin##NM_031475|ESPN|83715|espin##BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)##NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC017365|ACOT7|11332|acyl-CoA thioesterase 7##AK057168|ACOT7|11332|acyl-CoA thioesterase 7##NM_007274|ACOT7|11332|acyl-CoA thioesterase 7##U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AK299523|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##AB097001|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_001042665|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	0.845252	CTCF.p2:-3:0.845
chr8	117899866	117899982	reg1007357.p1	12.366	+	TSC_hg19_v1_chr8_-_117887068 NM_006265	-12842	-	AK289505 BC050381 TSC_hg19_v1_chr8_-_117887011 D38551	-12977	-	TSC_hg19_v1_chr8_+_117778793 AK055279 AK315770	-121130	+	BC140924 BC142621 NM_001025357 AB463771 AB181519	50535	+	EF560713 NM_001172811	62587	+	AK298294 NM_001172813 NM_001172815 AL713790	63279	+	NM_006265|RAD21|5885|RAD21 homolog (S. pombe)##AK289505|RAD21|5885|RAD21 homolog (S. pombe)##BC050381|RAD21|5885|RAD21 homolog (S. pombe)##D38551|RAD21|5885|RAD21 homolog (S. pombe)##AK055279|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##AK315770|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC140924|C8orf85|441376|chromosome 8 open reading frame 85##BC142621|C8orf85|441376|chromosome 8 open reading frame 85##NM_001025357|C8orf85|441376|chromosome 8 open reading frame 85##AB181519|C8orf85|441376|chromosome 8 open reading frame 85##EF560713|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172811|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	0.714069	CTCF.p2:-1:0.714
chr10	3085873	3085965	reg1004438.p1	12.365	+	AF034837 NM_018702	-1306250	-	TSC_hg19_v1_chr10_+_1102822 AK292591	-1983093	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-1983150	+	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	23828	+	AK092597 AX747622 NM_001242339	24899	+	BC021698 TSC_hg19_v1_chr10_+_3151628	65693	+	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet##BC021698|PFKP|5214|phosphofructokinase, platelet	0.853809	CTCF.p2:8:0.854
chr6	39157864	39157980	reg1005876.p1	12.365	+	TSC_hg19_v1_chr6_-_39082938 CR627244 AK001963 NM_018322 EU832483 EU832563 BC022007	-75076	-	AF086405 TSC_hg19_v1_chr6_-_39072506	-85463	-	BC112126 BC113493 NM_002062 TSC_hg19_v1_chr6_+_39016556 U01104 L23503 AB463688 U01156 U01157	-141336	+	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	39318	-	AF358910 CU693040 DQ891712 DQ894889 EU978944 BC025726 AY358853 AF339912 AK310582 AK315273 NM_031460 NM_001135111	124243	-	AF358909 AY253145 AY253146 AY253147 BC111860 NM_001135105 NM_001135106 NM_001135107 NM_032115 EU978943	132417	-	CR627244|C6orf64|55776|chromosome 6 open reading frame 64##AK001963|C6orf64|55776|chromosome 6 open reading frame 64##NM_018322|C6orf64|55776|chromosome 6 open reading frame 64##EU832483|C6orf64|55776|chromosome 6 open reading frame 64##EU832563|C6orf64|55776|chromosome 6 open reading frame 64##BC022007|C6orf64|55776|chromosome 6 open reading frame 64##AF086405|C6orf64|55776|chromosome 6 open reading frame 64##BC112126|GLP1R|2740|glucagon-like peptide 1 receptor##BC113493|GLP1R|2740|glucagon-like peptide 1 receptor##NM_002062|GLP1R|2740|glucagon-like peptide 1 receptor##U01104|GLP1R|2740|glucagon-like peptide 1 receptor##L23503|GLP1R|2740|glucagon-like peptide 1 receptor##U01156|GLP1R|2740|glucagon-like peptide 1 receptor##U01157|GLP1R|2740|glucagon-like peptide 1 receptor##AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5##AF358910|KCNK17|89822|potassium channel, subfamily K, member 17##DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17##DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17##EU978944|KCNK17|89822|potassium channel, subfamily K, member 17##BC025726|KCNK17|89822|potassium channel, subfamily K, member 17##AY358853|KCNK17|89822|potassium channel, subfamily K, member 17##AF339912|KCNK17|89822|potassium channel, subfamily K, member 17##AK310582|KCNK17|89822|potassium channel, subfamily K, member 17##AK315273|KCNK17|89822|potassium channel, subfamily K, member 17##NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17##NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17##AF358909|KCNK16|83795|potassium channel, subfamily K, member 16##AY253145|KCNK16|83795|potassium channel, subfamily K, member 16##AY253146|KCNK16|83795|potassium channel, subfamily K, member 16##AY253147|KCNK16|83795|potassium channel, subfamily K, member 16##BC111860|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135105|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135106|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135107|KCNK16|83795|potassium channel, subfamily K, member 16##NM_032115|KCNK16|83795|potassium channel, subfamily K, member 16##EU978943|KCNK16|83795|potassium channel, subfamily K, member 16	0.023888	
chr3	141022361	141022492	reg1005625.p1	12.364	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	-71740	+	AF403029 BC008324 NM_080862 AK056367	-251669	+	TSC_hg19_v1_chr3_+_140770412 BC051354	-251948	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	20630	+	TSC_hg19_v1_chr3_+_141087345 AK311501	64931	+	AK311479 TSC_hg19_v1_chr3_+_141105293	82862	+	AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38	0.999523	CTCF.p2:-11:1.000
chr10	24792688	24792821	reg1007562.p1	12.363	+	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	-37285	+	TSC_hg19_v1_chr10_+_24755441 AK300422	-37310	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	-294660	+	AK307604 TSC_hg19_v1_chr10_-_25012174	219419	-	AF480466 NM_020824 TSC_hg19_v1_chr10_-_25012632	219852	-	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	448778	-	BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217##AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21##AF480466|ARHGAP21|57584|Rho GTPase activating protein 21##NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21##AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	0.998955	CTCF.p2:8:0.999
chr4	185459272	185459427	reg1006411.p5	12.363	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	-63668	-	BC035035 AY358676 AK057370 NM_153343	-320284	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-631438	+	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	111252	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	111484	+	TSC_hg19_v1_chr4_+_185570923 BC064600 AK307317	111580	+	X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111##BC064600|CCDC111|201973|coiled-coil domain containing 111##AK307317|CCDC111|201973|coiled-coil domain containing 111	0.071727	
chr12	49147365	49147466	reg1005688.p2	12.362	+	AF045161 EF688064 TSC_hg19_v1_chr12_-_49110514 AF048730 AK290990 NM_001240	-36797	-	TSC_hg19_v1_chr12_-_49075997 AK000443 BC009746 AK094528 NM_017822	-71397	-	AB590798 CR541987 CR542017 HQ258062 J00270 BC112316 BC112318 BC069103 NM_002289	-183600	-	AK225224 NM_015270 AF250226	30478	-	TSC_hg19_v1_chr12_-_49182812 AB007882 NM_020983 BC064923	35393	-	NM_001206917 AK304537 AK300901	60823	+	AF045161|CCNT1|904|cyclin T1##EF688064|CCNT1|904|cyclin T1##AF048730|CCNT1|904|cyclin T1##AK290990|CCNT1|904|cyclin T1##NM_001240|CCNT1|904|cyclin T1##AK000443|KANSL2|54934|KAT8 regulatory NSL complex subunit 2##BC009746|KANSL2|54934|KAT8 regulatory NSL complex subunit 2##AK094528|KANSL2|54934|KAT8 regulatory NSL complex subunit 2##NM_017822|KANSL2|54934|KAT8 regulatory NSL complex subunit 2##CR541987|LALBA|3906|lactalbumin, alpha-##CR542017|LALBA|3906|lactalbumin, alpha-##HQ258062|LALBA|3906|lactalbumin, alpha-##J00270|LALBA|3906|lactalbumin, alpha-##BC112316|LALBA|3906|lactalbumin, alpha-##BC112318|LALBA|3906|lactalbumin, alpha-##BC069103|LALBA|3906|lactalbumin, alpha-##NM_002289|LALBA|3906|lactalbumin, alpha-##AK225224|ADCY6|112|adenylate cyclase 6##NM_015270|ADCY6|112|adenylate cyclase 6##AF250226|ADCY6|112|adenylate cyclase 6##AB007882|ADCY6|112|adenylate cyclase 6##NM_020983|ADCY6|112|adenylate cyclase 6##BC064923|ADCY6|112|adenylate cyclase 6##NM_001206917|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK304537|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK300901|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	0.996364	CTCF.p2:19:0.996
chr14	106765326	106765506	reg1001792.p2	12.362	+	AY393053 S85238 TSC_hg19_v1_chr14_-_106746153	-19311	-	AM279487 AF308557 Y17783 Y17784 HM774660 JN111012 AF103142 AY515002 HQ704054 JN110499 JN110977 JN111085 HM774129 HM774274 HM774585 HM774849 HQ704055 U21254 Y17140 AY050689 AY050700 AY392847 AY392855 AY393130 AY393134 AY393349 AY393375 AY393380 AY393622 AY393638 AY393642 AY393655 AY393684 AY393690 AY866668 DQ100948 AY393127 AF533986 AY866766 DQ926392 GU570247 AY866814 DQ100974 DQ926235 DQ926301 FJ039787 JN158459 AY944709 DQ535390 BC090939 AF062249 AF062286 AJ224083 GU179345 BC089421 BC066642 TSC_hg19_v1_chr14_-_106733637	-31900	-	L14821 U19885 U42468 X56526 DQ001068 L28052 AF283793 AF283795 AF283796 AF283798 AF283799 AF283805 AJ519221 AJ519266 AJ519267 AJ519271 AJ519324 AJ519325 AJ519330 AJ519337 L26907 L33035 L08083 AF431049 X67909 L08090 AF062136 AF062184 AF062205 AF062260 AF062270 AF062276 AF062280 AF174012 AF174019 AF174024 AF174029 AJ131062 AY172959 L01276 L11699 L23931 L38433 M26994 M26995 M62731 M99595 S72729 U43754 X17677 X65895 X65900 X81726 X81731 X81732 X81748 X81755 Z11946 Z47213 Z47214 Z47217 Z47226 Z47232 CU677431 L08088 Z14202 M18513 X14584 AK128301 Z14205 Z14201 Z14200 BC069020 M34024 BC015760 M29470 BC078671 TSC_hg19_v1_chr14_-_106725734 AK130476 AK092803 AK097010 AK097950 AK098817 AK128533 AK129776 AK301393 AX747738 BX640947 M97920	-39738	-	AJ305231 DQ118259 HM774835 DQ926094 AY866678 EU794438 Z80845 BC087841 TSC_hg19_v1_chr14_-_106774560	9019	-	U32154 AF460767 DQ524080 DQ454738 Y08403 HM774396 AF103161 AJ245070 AY866645 AM233757 AY670731 DQ005273 AB063909 AB363132 AJ556745 AY670715 AY670719 AY670726 AY670727 AY670745 AY670770 AY670773 AY670784 AY670819 AY670831 AY670837 AY670857 AY671081 AY671102 AY671324 AY671379 AY671400 AY671500 AY671586 AY671639 AY671641 AY671703 AY671775 AY671785 AY781815 AY781827 AY866636 DQ065711 DQ926028 DQ926188 DQ926206 FJ492934 AJ430733 EF178114 FJ385294 HM152518 AY392953 L28053 AY671012 AY671034 AY671045 AY671152 AY671174 AY671714 AY671721 L03677 Z75396 Z75404 L23570 BC073765 AK130813 AK301332 AK130585 AK128579 AK128568 AK129620 TSC_hg19_v1_chr14_-_106781004	15354	-	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 AF044420 AF044422 AF044425 AF044427 AF044442 AF090355 AF099201 AF174074 AF471431 AJ132850 AJ271549 AJ300787 AJ300793 AJ300798 AJ300803 AJ308463 AJ633622 AJ633623 AY028777 AY033265 AY033266 AY033267 AY530317 AY554176 AY640472 AY640475 AY640477 AY640483 AY640501 AY640511 AY640535 AY640539 AY640541 AY640544 AY640549 AY640550 AY640557 AY640558 AY640561 AY640568 AY640569 AY640573 AY640577 AY685306 AY781859 AY846266 AY846267 AY866744 AY941844 AY941856 AY941857 AY941860 AY941863 AY941865 AY941866 AY941868 AY941892 AY941896 AY941898 AY941901 AY941907 AY941913 AY941935 AY941942 AY941950 AY941953 AY941968 AY941970 AY941982 AY941983 AY941985 AY941986 AY941988 AY941989 AY944708 AY944716 AY971015 AY971027 AY971037 AY971078 AY971081 AY971115 AY971120 AY971130 AY971135 DQ065629 DQ065669 DQ065674 DQ065689 DQ065692 DQ065718 DQ065725 DQ431499 DQ431621 DQ431627 DQ840705 DQ840715 DQ840744 DQ926087 DQ926091 DQ926150 DQ926207 DQ926222 DQ926372 DQ926388 DQ926512 DQ926569 DQ926578 DQ926634 EF177978 EF178004 EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 AY866854 AY882579 AY927661 AY941847 AY941848 AY941861 AY941864 AY941867 AY941869 AY941871 AY941872 AY941874 AY941875 AY941893 AY941894 AY941895 AY941897 AY941904 AY941908 AY941922 AY941932 AY941933 AY941934 AY941944 AY941946 AY941951 AY941954 AY941956 AY941963 AY941964 AY941966 AY941967 AY941969 AY944690 AY971127 D83678 D83681 D83684 D83685 D83694 DQ005284 DQ065696 DQ100659 DQ100685 DQ100775 DQ100819 DQ100846 DQ100857 DQ100907 DQ100930 DQ212508 DQ212509 DQ431475 DQ431476 DQ431501 DQ431573 DQ431575 DQ431576 DQ431580 DQ431582 DQ431606 DQ431607 DQ431622 DQ431628 DQ431633 DQ431634 DQ431637 DQ431642 DQ431643 DQ431646 DQ431653 DQ431658 DQ535263 DQ535266 DQ535268 DQ535293 DQ535308 DQ535373 DQ535382 DQ535397 DQ535424 DQ535426 DQ535429 DQ535437 DQ535439 DQ535440 DQ535461 DQ535466 DQ840703 DQ840706 DQ840712 DQ840713 DQ840745 DQ840782 DQ840813 DQ923052 DQ926032 DQ926064 DQ926133 DQ926340 DQ926374 DQ926384 DQ926552 EF177969 EF177975 EF177991 EF178015 EF178075 EF178091 EF178098 EF178099 EF221755 EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	25878	-	BC090939|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089421|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC066642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AY172959|IGHV4-31|28396|immunoglobulin heavy variable 4-31##X14584|IGHV3-23|28442|immunoglobulin heavy variable 3-23##AK128301|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC069020|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC015760|IGHM|3507|immunoglobulin heavy constant mu##BC078671|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092803|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097010|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097950|IGHM|3507|immunoglobulin heavy constant mu##AK098817|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129776|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640947|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC087841|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073765|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK130813|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130585|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128568|IGHD|3495|immunoglobulin heavy constant delta##AK129620|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	4.964139	CTCF.p2:1:0.998	CTCF.p2:-18:0.998	CTCF.p2:-38:0.998	CTCF.p2:-58:0.870	CTCF.p2:60:0.955
chr7	38438459	38438571	reg1005975.p1	12.362	+	TSC_hg19_v1_chr7_-_38389583 BC035592	-48926	-	Y00482 TSC_hg19_v1_chr7_-_38389512	-49039	-	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	-63311	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	232447	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	232562	-	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	510278	-	BC035592|TRGV5|6978|T cell receptor gamma variable 5##BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)	0.998568	CTCF.p2:-10:0.999
chr1	234290553	234290699	reg1005613.p1	12.361	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-250014	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-540707	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	-540803	+	TSC_hg19_v1_chr1_+_234350005 BC037878	59380	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	218746	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	324234	-	AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##BC037878|SLC35F3|148641|solute carrier family 35, member F3##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1	0.444764	CTCF.p2:-8:0.445
chr22	30783455	30783545	reg1005027.p1	12.361	+	NM_001017981 AB464176	-198	-	TSC_hg19_v1_chr22_-_30752884 BC007684 AK303273 NM_001005409 NM_005877	-30564	-	TSC_hg19_v1_chr22_-_30752874 AB463284 CU013174 CU013462 DQ892687 DQ895931 BC001976 X85237 CR456575	-30688	-	NM_001204204 NM_012429 NM_033382 AL096881 TSC_hg19_v1_chr22_+_30793006 AK223587 BC048337 AK314390 AK091402 BC058915 AB033012 CR456571 AK303751 AK296540 CU013170 CU013458	9515	+	NM_001003704 NM_016498 AF151076 AF060924 BC030989 AK026104 BC009300 TSC_hg19_v1_chr22_+_30821776 BC001608 BC014446 CR456345 BC046132 AB528187 CU013056 CU013344	38239	+	AY158086 BC069641 BC101001 BC101002 BC101003 BC101004 AK298079 AK131358 AY240872 NM_174975	84488	-	NM_001017981|RNF215|200312|ring finger protein 215##BC007684|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##AK303273|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##NM_001005409|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##NM_005877|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CU013174|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CU013462|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##DQ892687|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##DQ895931|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##BC001976|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##X85237|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CR456575|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##NM_001204204|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_012429|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_033382|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AL096881|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK223587|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##BC048337|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK314390|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK091402|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##BC058915|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AB033012|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CR456571|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK303751|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK296540|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CU013170|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CU013458|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_001003704|MTFP1|51537|mitochondrial fission process 1##NM_016498|MTFP1|51537|mitochondrial fission process 1##AF151076|MTFP1|51537|mitochondrial fission process 1##AF060924|MTFP1|51537|mitochondrial fission process 1##BC030989|MTFP1|51537|mitochondrial fission process 1##AK026104|MTFP1|51537|mitochondrial fission process 1##BC009300|MTFP1|51537|mitochondrial fission process 1##BC001608|MTFP1|51537|mitochondrial fission process 1##BC014446|MTFP1|51537|mitochondrial fission process 1##CR456345|MTFP1|51537|mitochondrial fission process 1##BC046132|MTFP1|51537|mitochondrial fission process 1##AY158086|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC069641|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101001|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101002|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101003|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101004|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AK298079|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AK131358|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AY240872|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##NM_174975|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	0.999865	CTCF.p2:-1:1.000
chr10	68691227	68691364	reg1007427.p1	12.360	+	NM_178011 BX640611 AY358315 BC111492	-5480	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-3410054	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-3410133	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	734101	-	AF091606 AK313882 NM_013266	764642	-	CR457184 AF176013 BC017018 AK289537 AF176012 NM_021800 NM_201262	906557	-	NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##CR457184|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176013|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##BC017018|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AK289537|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176012|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_021800|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_201262|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12	0.596169	CTCF.p2:16:0.596
chr11	112666039	112666149	reg1005900.p1	12.360	+	AY364435 NM_001145024	-534512	-	TSC_hg19_v1_chr11_+_112097100 NM_000317 BC018029 D17400 AK310768 BC009686 AK307133 M97655 AM392676 AM393300 AM393668 DQ890961 DQ894133	-568967	+	NM_001037290 AK027801 AK297853 AB096252	-618989	+	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 TSC_hg19_v1_chr11_+_112831996 AK314589	165893	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	166037	+	X16841 TSC_hg19_v1_chr11_+_112832212	166112	+	AY364435|C11orf34|349633|chromosome 11 open reading frame 34##NM_001145024|C11orf34|349633|chromosome 11 open reading frame 34##NM_000317|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC018029|PTS|5805|6-pyruvoyltetrahydropterin synthase##D17400|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK310768|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC009686|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK307133|PTS|5805|6-pyruvoyltetrahydropterin synthase##M97655|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM392676|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393300|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393668|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ890961|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ894133|PTS|5805|6-pyruvoyltetrahydropterin synthase##NM_001037290|BCO2|83875|beta-carotene oxygenase 2##AK027801|BCO2|83875|beta-carotene oxygenase 2##AK297853|BCO2|83875|beta-carotene oxygenase 2##AB096252|BCO2|83875|beta-carotene oxygenase 2##NM_000615|NCAM1|4684|neural cell adhesion molecule 1##NM_001076682|NCAM1|4684|neural cell adhesion molecule 1##NM_001242607|NCAM1|4684|neural cell adhesion molecule 1##NM_001242608|NCAM1|4684|neural cell adhesion molecule 1##NM_181351|NCAM1|4684|neural cell adhesion molecule 1##AK314589|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1	0.862327	CTCF.p2:0:0.862
chr12	92801977	92802119	reg1007584.p1	12.360	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-262405	-	NM_001920	-1225243	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-1225468	-	AJ845165 AJ845166 NM_001025233	15686	+	AJ845168 NM_001025232	19875	-	NM_001037671 NM_001178097	294570	+	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74	1.615753	CTCF.p2:8:0.823	CTCF.p2:60:0.793
chr2	196183323	196183464	reg1008343.p1	12.360	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-3123764	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	-3124079	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-3471422	-	BC029413 NM_001127257 CR749813	338182	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	338515	+	AB463018 AF327442 AK094515 NM_018897 AB023161	750102	-	BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7	0.735511	CTCF.p2:3:0.736
chr2	237261833	237261956	reg1005011.p1	12.359	+	NM_212556 BX647589	-88900	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-185262	-	AK311262 TSC_hg19_v1_chr2_-_237076045	-185880	-	BC043504 NM_024726 AK294105 BC028699	154238	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	216534	+	BC036499 NM_006710 NM_198189	732124	+	NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	0.652299	CTCF.p2:-11:0.652
chr4	110725434	110725549	reg1005426.p1	12.359	+	NM_000204 TSC_hg19_v1_chr4_-_110723352	-2146	-	AB590959 CU676662 J02770 TSC_hg19_v1_chr4_-_110723176 AK290625 BC005275 Y00318 BC020718 AK299232	-2325	-	DQ892725 DQ896860 CU677869 TSC_hg19_v1_chr4_-_110651216 AF306567 AF332892 AY359024 BC017218 AK075389 AK313081 NM_030821	-74369	-	TSC_hg19_v1_chr4_+_110736670 BC003413 NM_018983 NM_032993 AJ276003	11181	+	TSC_hg19_v1_chr4_+_110736921 AK310489	11456	+	NM_006583 BC128120 BC128121 BC128401	23662	+	NM_000204|CFI|3426|complement factor I##J02770|CFI|3426|complement factor I##AK290625|CFI|3426|complement factor I##BC005275|CFI|3426|complement factor I##Y00318|CFI|3426|complement factor I##BC020718|CFI|3426|complement factor I##AK299232|CFI|3426|complement factor I##DQ892725|PLA2G12A|81579|phospholipase A2, group XIIA##DQ896860|PLA2G12A|81579|phospholipase A2, group XIIA##AF306567|PLA2G12A|81579|phospholipase A2, group XIIA##AF332892|PLA2G12A|81579|phospholipase A2, group XIIA##AY359024|PLA2G12A|81579|phospholipase A2, group XIIA##BC017218|PLA2G12A|81579|phospholipase A2, group XIIA##AK075389|PLA2G12A|81579|phospholipase A2, group XIIA##AK313081|PLA2G12A|81579|phospholipase A2, group XIIA##NM_030821|PLA2G12A|81579|phospholipase A2, group XIIA##BC003413|GAR1|54433|GAR1 ribonucleoprotein homolog (yeast)##NM_018983|GAR1|54433|GAR1 ribonucleoprotein homolog (yeast)##NM_032993|GAR1|54433|GAR1 ribonucleoprotein homolog (yeast)##AJ276003|GAR1|54433|GAR1 ribonucleoprotein homolog (yeast)##AK310489|GAR1|54433|GAR1 ribonucleoprotein homolog (yeast)##NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog	0.98877	CTCF.p2:16:0.989
chr2	225149134	225149294	reg1004554.p2	12.358	+	TSC_hg19_v1_chr2_-_224904004 BC015663 AK225823 AK297588 AK312499 NM_001136528 NM_006216	-245044	-	AK295564 NM_001136530	-245874	-	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	-282586	-	BC025754 NM_001122779 NM_024785 AK026399	117516	-	AF052147 BC031844 TSC_hg19_v1_chr2_-_225370764	221514	-	U58089 TSC_hg19_v1_chr2_-_225378353	229122	-	BC015663|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK225823|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK297588|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK312499|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136528|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_006216|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##BC025754|FAM124B|79843|family with sequence similarity 124B##NM_001122779|FAM124B|79843|family with sequence similarity 124B##NM_024785|FAM124B|79843|family with sequence similarity 124B##AK026399|FAM124B|79843|family with sequence similarity 124B##AF052147|CUL3|8452|cullin 3##BC031844|CUL3|8452|cullin 3##U58089|CUL3|8452|cullin 3	0.997948	CTCF.p2:26:0.998
chr4	103930398	103930526	reg1007129.p1	12.358	+	TSC_hg19_v1_chr4_+_103790197 AK292134 BC020831 BX537971 BC032300 AM392809 AM393385	-140246	+	TSC_hg19_v1_chr4_+_103790148 NM_001008388	-140310	+	NM_181893 NM_181890	-140446	-	BC110794 TSC_hg19_v1_chr4_-_103940827 BC022079 BC046636 AK313592 BC132712 BC136966 BC144443	10346	-	AY461581 TSC_hg19_v1_chr4_-_103940874 AF447585 DQ003059 NM_001100874 NM_139173	10406	-	BC047447 TSC_hg19_v1_chr4_-_103997468 AK299888	67011	-	AK292134|CISD2|493856|CDGSH iron sulfur domain 2##BC020831|CISD2|493856|CDGSH iron sulfur domain 2##BX537971|CISD2|493856|CDGSH iron sulfur domain 2##BC032300|CISD2|493856|CDGSH iron sulfur domain 2##AM392809|CISD2|493856|CDGSH iron sulfur domain 2##AM393385|CISD2|493856|CDGSH iron sulfur domain 2##NM_001008388|CISD2|493856|CDGSH iron sulfur domain 2##NM_181893|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181890|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##BC110794|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC022079|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC046636|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##AK313592|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC132712|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC136966|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC144443|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##AY461581|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##AF447585|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##DQ003059|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##NM_001100874|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##NM_139173|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC047447|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##AK299888|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2	0.645738	CTCF.p2:13:0.646
chr13	95841738	95841847	reg1004950.p1	12.357	+	X65666 X71136 AB464716 NM_007084	-477474	-	TSC_hg19_v1_chr13_+_95254110 NM_180989 BC033906 BC052243 AK126794	-587690	+	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	-593296	-	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	111920	-	NM_001160100 NM_182848 AK055855	244062	+	TSC_hg19_v1_chr13_+_96204946 NM_006984 BC010920 U89916 AK315737 DQ892831 DQ896077 CR456845	363182	+	X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##NM_180989|GPR180|160897|G protein-coupled receptor 180##BC033906|GPR180|160897|G protein-coupled receptor 180##BC052243|GPR180|160897|G protein-coupled receptor 180##AK126794|GPR180|160897|G protein-coupled receptor 180##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10##NM_006984|CLDN10|9071|claudin 10##BC010920|CLDN10|9071|claudin 10##U89916|CLDN10|9071|claudin 10##AK315737|CLDN10|9071|claudin 10##DQ892831|CLDN10|9071|claudin 10##DQ896077|CLDN10|9071|claudin 10##CR456845|CLDN10|9071|claudin 10	0.99754	CTCF.p2:-18:0.998
chr11	10646135	10646274	reg1008142.p1	12.356	+	CU693164 DQ892040 DQ895232 AK300885 BC026231 AF118108 AF127670 TSC_hg19_v1_chr11_-_10590213 AY358925 AK075443 AK312462 NM_006691	-55983	-	BC028123 TSC_hg19_v1_chr11_+_10562846	-83372	+	TSC_hg19_v1_chr11_-_10562724 AK289764 AF214680 BC018104 AK309367 NM_016422	-83466	-	AK300358 NM_001098579 AF081249	27673	-	TSC_hg19_v1_chr11_-_10715063 AK301296 AK127209 NM_001100167 BC117127	68876	-	AF081250 TSC_hg19_v1_chr11_-_10715170 AK304702	68963	-	DQ892040|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##DQ895232|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK300885|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##BC026231|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AF118108|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AF127670|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AY358925|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK075443|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK312462|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##NM_006691|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##BC028123|MRVI1-AS1|100129827|MRVI1 antisense RNA 1 (non-protein coding)##AK289764|RNF141|50862|ring finger protein 141##AF214680|RNF141|50862|ring finger protein 141##BC018104|RNF141|50862|ring finger protein 141##AK309367|RNF141|50862|ring finger protein 141##NM_016422|RNF141|50862|ring finger protein 141##AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog##AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog##AK301296|MRVI1|10335|murine retrovirus integration site 1 homolog##AK127209|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001100167|MRVI1|10335|murine retrovirus integration site 1 homolog##BC117127|MRVI1|10335|murine retrovirus integration site 1 homolog##AF081250|MRVI1|10335|murine retrovirus integration site 1 homolog##AK304702|MRVI1|10335|murine retrovirus integration site 1 homolog	0.992072	CTCF.p2:-14:0.992
chr15	21927380	21927497	reg1005325.p1	12.356	+	NM_207355 BC066981	-855460	-	NM_001145004	-1180325	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-1216001	-	NM_207355 BC066981	155700	-	BC136985 NM_001004719	441039	+	BC136597 BC136598 NM_001005241 DQ786223	455007	+	NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4	0.769322	CTCF.p2:-10:0.769
chr11	12065898	12066034	reg1008031.p1	12.354	+	TSC_hg19_v1_chr11_-_12030884 AB057591 NM_013253	-35064	-	TSC_hg19_v1_chr11_-_12030877 AY358378	-35108	-	AK289897 TSC_hg19_v1_chr11_-_12030788	-35187	-	TSC_hg19_v1_chr11_+_12132122 BC044577 NM_014632 BC015755 AB018293	66164	+	AK123671 NM_032867	242480	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	333143	+	AB057591|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_013253|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AY358378|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK289897|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##BC044577|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_014632|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##BC015755|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB018293|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha	0.999726	CTCF.p2:5:1.000
chr3	73505046	73505184	reg1007646.p1	12.354	+	BC051316 BC064501 NM_018029	-394306	+	TSC_hg19_v1_chr3_+_73046081 AF327345 NM_174907 BC128136 BC128137	-458995	+	TSC_hg19_v1_chr3_+_73045984 BC110889	-459124	+	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	168923	-	AB384611 BC150608 NM_020872	1065187	-	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	1979034	-	BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene	0.826776	CTCF.p2:2:0.827
chr9	101947001	101947152	reg1008098.p1	12.354	+	TSC_hg19_v1_chr9_+_101867472 AB384823 EF142853 EF142854	-79597	+	TSC_hg19_v1_chr9_+_101867401 AJ619019 L11695 NM_001130916 NM_004612	-79668	+	BC071181 TSC_hg19_v1_chr9_+_101867394	-79683	+	CU676096 DQ891989 DQ895179 TSC_hg19_v1_chr9_-_101984197 BC017876 AK027417 AK074704 AB161356	37116	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	37141	-	TSC_hg19_v1_chr9_-_101984233 NM_033087	37167	-	AJ619019|TGFBR1|7046|transforming growth factor, beta receptor 1##L11695|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_001130916|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_004612|TGFBR1|7046|transforming growth factor, beta receptor 1##BC071181|TGFBR1|7046|transforming growth factor, beta receptor 1##DQ891989|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##DQ895179|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##BC017876|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK027417|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074704|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AB161356|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)	0.983426	CTCF.p2:-7:0.983
chr1	15373125	15373273	reg1005831.p1	12.353	+	AY505122 NM_001017999	-100785	+	AY505121 NM_001018001	-116904	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	-122480	+	AK292184 NM_001136216 NM_001136217 TSC_hg19_v1_chr1_+_15479047	105832	+	AK129922 TSC_hg19_v1_chr1_+_15479310	106105	+	TSC_hg19_v1_chr1_+_15480249 AK001061 NM_001136218 NM_018022 BC000593 BC005177 AK098467	107049	+	AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AK292184|TMEM51|55092|transmembrane protein 51##NM_001136216|TMEM51|55092|transmembrane protein 51##NM_001136217|TMEM51|55092|transmembrane protein 51##AK129922|TMEM51|55092|transmembrane protein 51##AK001061|TMEM51|55092|transmembrane protein 51##NM_001136218|TMEM51|55092|transmembrane protein 51##NM_018022|TMEM51|55092|transmembrane protein 51##BC000593|TMEM51|55092|transmembrane protein 51##BC005177|TMEM51|55092|transmembrane protein 51##AK098467|TMEM51|55092|transmembrane protein 51	0.981933	CTCF.p2:13:0.982
chr14	102990924	102991073	reg1007552.p1	12.353	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-14884	-	AK291868 TSC_hg19_v1_chr14_-_102976070	-14965	-	TSC_hg19_v1_chr14_+_102829428 BC030791 AK296395 AK299690 BC142667 BC142715 AK127721	-161573	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	68000	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	68163	+	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	252821	+	BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##AK291868|ANKRD9|122416|ankyrin repeat domain 9##BC030791|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK296395|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK299690|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142667|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142715|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK127721|TECPR2|9895|tectonin beta-propeller repeat containing 2##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##AF155595|RCOR1|23186|REST corepressor 1##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3	0.999318	CTCF.p2:-8:0.999
chr1	45484446	45484558	reg1006208.p2	12.353	+	TSC_hg19_v1_chr1_+_45478442 AK293702	-6051	+	TSC_hg19_v1_chr1_+_45477917 AF104421 AF104422 AF104423 AF104424 AF104425 AF104426 AF104427 AF104428 AF104429 AF104430 AF104431 AF104432 AF104433 AF104434 AF104435 AF104436 AF104437 AF104438 AF104439 AF104440 AK295284 M14016 BX647308 AK225053 AK308996 DQ890688 DQ893870 AB529048 BT006737 CR456976 CR542057	-6576	+	TSC_hg19_v1_chr1_+_45477906 AK291877 AK309446 AK310208 AK309724 AK315878 BC001778	-6604	+	TSC_hg19_v1_chr1_-_45672278 AB040944 NM_020883	187749	-	TSC_hg19_v1_chr1_+_45769564 BC035497	285073	+	NM_032756 BC007293	308058	+	AK293702|UROD|7389|uroporphyrinogen decarboxylase##AF104421|UROD|7389|uroporphyrinogen decarboxylase##AF104422|UROD|7389|uroporphyrinogen decarboxylase##AF104423|UROD|7389|uroporphyrinogen decarboxylase##AF104424|UROD|7389|uroporphyrinogen decarboxylase##AF104425|UROD|7389|uroporphyrinogen decarboxylase##AF104426|UROD|7389|uroporphyrinogen decarboxylase##AF104427|UROD|7389|uroporphyrinogen decarboxylase##AF104428|UROD|7389|uroporphyrinogen decarboxylase##AF104429|UROD|7389|uroporphyrinogen decarboxylase##AF104430|UROD|7389|uroporphyrinogen decarboxylase##AF104431|UROD|7389|uroporphyrinogen decarboxylase##AF104432|UROD|7389|uroporphyrinogen decarboxylase##AF104433|UROD|7389|uroporphyrinogen decarboxylase##AF104434|UROD|7389|uroporphyrinogen decarboxylase##AF104435|UROD|7389|uroporphyrinogen decarboxylase##AF104436|UROD|7389|uroporphyrinogen decarboxylase##AF104437|UROD|7389|uroporphyrinogen decarboxylase##AF104438|UROD|7389|uroporphyrinogen decarboxylase##AF104439|UROD|7389|uroporphyrinogen decarboxylase##AF104440|UROD|7389|uroporphyrinogen decarboxylase##AK295284|UROD|7389|uroporphyrinogen decarboxylase##M14016|UROD|7389|uroporphyrinogen decarboxylase##BX647308|UROD|7389|uroporphyrinogen decarboxylase##AK225053|UROD|7389|uroporphyrinogen decarboxylase##AK308996|UROD|7389|uroporphyrinogen decarboxylase##DQ890688|UROD|7389|uroporphyrinogen decarboxylase##DQ893870|UROD|7389|uroporphyrinogen decarboxylase##BT006737|UROD|7389|uroporphyrinogen decarboxylase##CR456976|UROD|7389|uroporphyrinogen decarboxylase##CR542057|UROD|7389|uroporphyrinogen decarboxylase##AK291877|UROD|7389|uroporphyrinogen decarboxylase##AK309446|UROD|7389|uroporphyrinogen decarboxylase##AK310208|UROD|7389|uroporphyrinogen decarboxylase##AK309724|UROD|7389|uroporphyrinogen decarboxylase##AK315878|UROD|7389|uroporphyrinogen decarboxylase##BC001778|UROD|7389|uroporphyrinogen decarboxylase##AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5##NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5##BC035497|LOC400752|400752|uncharacterized LOC400752##NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	0.521059	CTCF.p2:-5:0.521
chr3	129369250	129369379	reg1007339.p1	12.353	+	TSC_hg19_v1_chr3_-_129325518 NM_015103 AB014520 AY116661 BC150280	-43875	-	AY158091 NM_153833	-107258	+	NM_000539 BX537381 BC112104 BC112106 AB464154 AM392780	-121787	+	AK291448 BC039859 NM_001017395	229996	-	TSC_hg19_v1_chr3_-_129612445 NM_001128224	243104	-	TSC_hg19_v1_chr3_+_129612705 AK127796	243404	+	NM_015103|PLXND1|23129|plexin D1##AB014520|PLXND1|23129|plexin D1##AY116661|PLXND1|23129|plexin D1##BC150280|PLXND1|23129|plexin D1##AY158091|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_153833|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_000539|RHO|6010|rhodopsin##BX537381|RHO|6010|rhodopsin##BC112104|RHO|6010|rhodopsin##BC112106|RHO|6010|rhodopsin##AM392780|RHO|6010|rhodopsin##AK291448|TMCC1|23023|transmembrane and coiled-coil domain family 1##BC039859|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001017395|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001128224|TMCC1|23023|transmembrane and coiled-coil domain family 1##AK127796|LOC100507032|100507032|uncharacterized LOC100507032	0.259538	CTCF.p2:-2:0.260
chr17	39805018	39805148	reg1007540.p2	12.352	+	AB528302 DQ891101 DQ894283 BC072018 BC072019 BC011901 X62571 BC000159 BC056421 AK304373 AK095342 NM_000422	-24262	-	S79867 DQ891307 DQ896818 AF061812 BC039169 AK290853 AK309296 AK309278 NM_005557	-36075	-	BT007186 AB527765 DQ890733 DQ892997 DQ893905 BC042437 BC002690 BC019097 BC094830 AK309280 NM_000526	-61968	-	NM_005801 TSC_hg19_v1_chr17_+_39845138 AL050005 AK311862	40050	+	AK311209 TSC_hg19_v1_chr17_+_39845141	40058	+	TSC_hg19_v1_chr17_+_39845142 BC005118 L26247 AF083441 BC008710 AF100737 AJ012375 DQ896700 EU176404 BT006645 CR457051	40133	+	DQ891101|KRT17|3872|keratin 17##DQ894283|KRT17|3872|keratin 17##BC072018|KRT17|3872|keratin 17##BC072019|KRT17|3872|keratin 17##BC011901|KRT17|3872|keratin 17##X62571|KRT17|3872|keratin 17##BC000159|KRT17|3872|keratin 17##BC056421|KRT17|3872|keratin 17##AK304373|KRT17|3872|keratin 17##AK095342|KRT17|3872|keratin 17##NM_000422|KRT17|3872|keratin 17##S79867|KRT16|3868|keratin 16##DQ891307|KRT16|3868|keratin 16##DQ896818|KRT16|3868|keratin 16##AF061812|KRT16|3868|keratin 16##BC039169|KRT16|3868|keratin 16##AK290853|KRT16|3868|keratin 16##NM_005557|KRT16|3868|keratin 16##BT007186|KRT14|3861|keratin 14##DQ890733|KRT14|3861|keratin 14##DQ892997|KRT14|3861|keratin 14##DQ893905|KRT14|3861|keratin 14##BC042437|KRT14|3861|keratin 14##BC002690|KRT14|3861|keratin 14##BC019097|KRT14|3861|keratin 14##BC094830|KRT14|3861|keratin 14##NM_000526|KRT14|3861|keratin 14##NM_005801|EIF1|10209|eukaryotic translation initiation factor 1##AL050005|EIF1|10209|eukaryotic translation initiation factor 1##AK311862|EIF1|10209|eukaryotic translation initiation factor 1##AK311209|EIF1|10209|eukaryotic translation initiation factor 1##BC005118|EIF1|10209|eukaryotic translation initiation factor 1##L26247|EIF1|10209|eukaryotic translation initiation factor 1##AF083441|EIF1|10209|eukaryotic translation initiation factor 1##BC008710|EIF1|10209|eukaryotic translation initiation factor 1##AF100737|EIF1|10209|eukaryotic translation initiation factor 1##AJ012375|EIF1|10209|eukaryotic translation initiation factor 1##DQ896700|EIF1|10209|eukaryotic translation initiation factor 1##EU176404|EIF1|10209|eukaryotic translation initiation factor 1##BT006645|EIF1|10209|eukaryotic translation initiation factor 1##CR457051|EIF1|10209|eukaryotic translation initiation factor 1	0.972097	CTCF.p2:-16:0.972
chr20	3096297	3096414	reg1005326.p1	12.352	+	AF031476 M25647 X03172 BC126196 BC126224 BC018062 NM_000490	-31003	-	X03173 TSC_hg19_v1_chr20_+_3052956	-43458	+	BC069144 NM_000915 BC101841 BC101843 M25650 AB463993 M62611	-44036	+	BC000515 TSC_hg19_v1_chr20_-_3140500 AK222876 AK301748 BC064544 BC011856	44133	-	TSC_hg19_v1_chr20_-_3140509 AK022444 AK023211 BC046122	44159	-	AB020667 TSC_hg19_v1_chr20_-_3140529 AK222570 BC007413 NM_021826 NM_014948 NM_199415	44181	-	AF031476|AVP|551|arginine vasopressin##M25647|AVP|551|arginine vasopressin##X03172|AVP|551|arginine vasopressin##BC126196|AVP|551|arginine vasopressin##BC126224|AVP|551|arginine vasopressin##BC018062|AVP|551|arginine vasopressin##NM_000490|AVP|551|arginine vasopressin##X03173|OXT|5020|oxytocin, prepropeptide##BC069144|OXT|5020|oxytocin, prepropeptide##NM_000915|OXT|5020|oxytocin, prepropeptide##BC101841|OXT|5020|oxytocin, prepropeptide##BC101843|OXT|5020|oxytocin, prepropeptide##M25650|OXT|5020|oxytocin, prepropeptide##M62611|OXT|5020|oxytocin, prepropeptide##BC000515|UBOX5|22888|U-box domain containing 5##AK222876|UBOX5|22888|U-box domain containing 5##AK301748|FASTKD5|60493|FAST kinase domains 5##BC064544|UBOX5|22888|U-box domain containing 5##BC011856|FASTKD5|60493|FAST kinase domains 5##AK022444|UBOX5|22888|U-box domain containing 5##AK023211|FASTKD5|60493|FAST kinase domains 5##BC046122|UBOX5|22888|U-box domain containing 5##AB020667|UBOX5|22888|U-box domain containing 5##AK222570|UBOX5|22888|U-box domain containing 5##BC007413|FASTKD5|60493|FAST kinase domains 5##NM_021826|FASTKD5|60493|FAST kinase domains 5##NM_014948|UBOX5|22888|U-box domain containing 5##NM_199415|UBOX5|22888|U-box domain containing 5	0.016798	
chr6	83931728	83931871	reg1006234.p1	12.352	+	AK301867 NM_001199917 TSC_hg19_v1_chr6_-_83903693	-28137	-	NM_033411 TSC_hg19_v1_chr6_+_83903075 AK309249 AK295724 AK302978 AK313083	-28702	+	AF102265 AB032081 AF180371 TSC_hg19_v1_chr6_-_83902977 AK314512 AK225363 AK001365 AK023432 BC001258 NM_001199918 NM_001199919 NM_015599	-28827	-	U43944 TSC_hg19_v1_chr6_-_84140724 X77244 DQ892155 EU176687 AB528430 L34035	208893	-	TSC_hg19_v1_chr6_-_84140744 BC025246	208949	-	TSC_hg19_v1_chr6_-_84140767 AK223417 AK301875 AK289783 AK302777	208992	-	AK301867|PGM3|5238|phosphoglucomutase 3##NM_001199917|PGM3|5238|phosphoglucomutase 3##NM_033411|RWDD2A|112611|RWD domain containing 2A##AK309249|RWDD2A|112611|RWD domain containing 2A##AK295724|RWDD2A|112611|RWD domain containing 2A##AK302978|RWDD2A|112611|RWD domain containing 2A##AK313083|RWDD2A|112611|RWD domain containing 2A##AF102265|PGM3|5238|phosphoglucomutase 3##AB032081|PGM3|5238|phosphoglucomutase 3##AF180371|PGM3|5238|phosphoglucomutase 3##AK314512|PGM3|5238|phosphoglucomutase 3##AK225363|PGM3|5238|phosphoglucomutase 3##AK001365|PGM3|5238|phosphoglucomutase 3##AK023432|PGM3|5238|phosphoglucomutase 3##BC001258|PGM3|5238|phosphoglucomutase 3##NM_001199918|PGM3|5238|phosphoglucomutase 3##NM_001199919|PGM3|5238|phosphoglucomutase 3##NM_015599|PGM3|5238|phosphoglucomutase 3##U43944|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##X77244|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##DQ892155|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##EU176687|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##L34035|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##BC025246|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK223417|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK301875|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK289783|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK302777|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	0.958317	CTCF.p2:-2:0.958
chr1	26690424	26690550	reg1007898.p1	12.351	+	AK000902 NM_001039775	-9867	-	NM_145345 AK097368	-45683	-	TSC_hg19_v1_chr1_+_26644458 BC000644 X62466 X67699 BT007116 CR456874	-46004	+	BC028731 BC029505 NM_001114759 NM_173574	8758	-	TSC_hg19_v1_chr1_+_26737262 BC028566 NM_024674	46764	+	TSC_hg19_v1_chr1_+_26737312 AF521099 AK022519 DQ893398 DQ896719 AB528435 CU688506	46856	+	AK000902|AIM1L|55057|absent in melanoma 1-like##NM_001039775|AIM1L|55057|absent in melanoma 1-like##NM_145345|UBXN11|91544|UBX domain protein 11##AK097368|UBXN11|91544|UBX domain protein 11##BC000644|CD52|1043|CD52 molecule##X62466|CD52|1043|CD52 molecule##X67699|CD52|1043|CD52 molecule##BT007116|CD52|1043|CD52 molecule##CR456874|CD52|1043|CD52 molecule##BC028731|ZNF683|257101|zinc finger protein 683##BC029505|ZNF683|257101|zinc finger protein 683##NM_001114759|ZNF683|257101|zinc finger protein 683##NM_173574|ZNF683|257101|zinc finger protein 683##BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)##NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)##AF521099|LIN28A|79727|lin-28 homolog A (C. elegans)##AK022519|LIN28A|79727|lin-28 homolog A (C. elegans)##DQ893398|LIN28A|79727|lin-28 homolog A (C. elegans)##DQ896719|LIN28A|79727|lin-28 homolog A (C. elegans)	0.998666	CTCF.p2:8:0.999
chr14	95893482	95893593	reg1006710.p1	12.351	+	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	-107354	-	TSC_hg19_v1_chr14_+_95624023 BC040596	-269516	+	TSC_hg19_v1_chr14_-_95623867 BC046934 AB023145 BC150287 NM_177438	-269745	-	AK131436 BC146604 BX248076 NM_152592	48567	-	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	107478	-	TSC_hg19_v1_chr14_+_96001352 NM_016417	107789	+	AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC046934|DICER1|23405|dicer 1, ribonuclease type III##AB023145|DICER1|23405|dicer 1, ribonuclease type III##BC150287|DICER1|23405|dicer 1, ribonuclease type III##NM_177438|DICER1|23405|dicer 1, ribonuclease type III##AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##NM_016417|GLRX5|51218|glutaredoxin 5	0.979625	CTCF.p2:-14:0.980
chr19	30221500	30221640	reg1007492.p1	12.351	+	TSC_hg19_v1_chr19_-_30206402 NM_031448	-15148	-	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	-15478	-	TSC_hg19_v1_chr19_+_30156375 AK225814	-65149	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	81331	+	BC026184 NM_001252641	192980	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	211712	+	NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone	0.901942	CTCF.p2:-23:0.902
chr2	73404608	73404781	reg1006559.p3	12.351	+	TSC_hg19_v1_chr2_-_73340101 AF334812 AB020664 NM_015470	-64585	-	TSC_hg19_v1_chr2_-_73340066 BC035013	-64630	-	DQ890991 DQ894168 TSC_hg19_v1_chr2_-_73339998 BC099902	-64710	-	AK295936 NM_001134462 AK316410	24713	+	TSC_hg19_v1_chr2_+_73441372 NM_006062 AK300779 AK301809 BC073806 AB527925 U50383	36711	+	TSC_hg19_v1_chr2_-_73460365 AY358605 BC005069 NM_032319 AK312077	55670	-	AF334812|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##AB020664|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##NM_015470|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##BC035013|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##DQ890991|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##DQ894168|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##BC099902|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##AK295936|NOTO|344022|notochord homeobox##NM_001134462|NOTO|344022|notochord homeobox##AK316410|NOTO|344022|notochord homeobox##NM_006062|SMYD5|10322|SMYD family member 5##AK300779|SMYD5|10322|SMYD family member 5##AK301809|SMYD5|10322|SMYD family member 5##BC073806|SMYD5|10322|SMYD family member 5##U50383|SMYD5|10322|SMYD family member 5##AY358605|PRADC1|84279|protease-associated domain containing 1##BC005069|PRADC1|84279|protease-associated domain containing 1##NM_032319|PRADC1|84279|protease-associated domain containing 1##AK312077|PRADC1|84279|protease-associated domain containing 1	0.740372	CTCF.p2:-18:0.611
chr10	24485492	24485630	reg1007943.p1	12.349	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	-501884	+	AB188491 NM_001145373 TSC_hg19_v1_chr10_+_23728216	-757351	+	BC035732 NM_153714	-851790	-	AK091142 AX746804 NM_001098501 NM_019590 TSC_hg19_v1_chr10_+_24497850	12227	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	12533	+	TSC_hg19_v1_chr10_+_24755441 AK300422	269883	+	AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217##AB188491|OTUD1|220213|OTU domain containing 1##NM_001145373|OTUD1|220213|OTU domain containing 1##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67##AK091142|KIAA1217|56243|KIAA1217##NM_001098501|KIAA1217|56243|KIAA1217##NM_019590|KIAA1217|56243|KIAA1217##AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217	0.99686	CTCF.p2:-7:0.997
chr10	12753198	12753337	reg1007438.p1	12.348	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-361490	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-361550	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	-361692	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	290432	-	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	388878	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	450301	+	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10	0.995683	CTCF.p2:18:0.996
chr5	78260831	78260959	reg1003803.p1	12.348	+	TSC_hg19_v1_chr5_-_77944584 NM_005779	-316329	-	CR936660 TSC_hg19_v1_chr5_-_77845052	-415872	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-454699	-	J05225 TSC_hg19_v1_chr5_-_78281101	20193	-	AK290865 TSC_hg19_v1_chr5_-_78281134	20238	-	TSC_hg19_v1_chr5_-_78281142 AK314903	20251	-	NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B##AK314903|ARSB|411|arylsulfatase B	0.42336	CTCF.p2:27:0.423
chrX	11162521	11162643	reg1005999.p1	12.348	+	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	-33113	+	NM_001122608 NM_001171991 NM_005333 AK097815 TSC_hg19_v1_chrX_+_11129447 CR749578	-33152	+	NM_033290	-310774	-	AF177663 NM_013423 AK297713	121526	-	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	148960	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	521238	-	BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase##NM_001122608|HCCS|3052|holocytochrome c synthase##NM_001171991|HCCS|3052|holocytochrome c synthase##NM_005333|HCCS|3052|holocytochrome c synthase##AK097815|HCCS|3052|holocytochrome c synthase##CR749578|HCCS|3052|holocytochrome c synthase##NM_033290|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6	0.999917	CTCF.p2:-21:1.000
chr20	48505127	48505277	reg1008536.p1	12.347	+	CR749638 TSC_hg19_v1_chr20_+_48429436 AB023156 BC112213 AK295803 AK308328 AK131001 AK295665 AK310530 AK295822	-75784	+	NM_015266 TSC_hg19_v1_chr20_+_48429364 AK300318	-75894	+	TSC_hg19_v1_chr20_-_48330471 NM_004776	-174736	-	AK289644 NM_001135773	25073	-	BC009481 AB018300 TSC_hg19_v1_chr20_-_48532030 AK023229	26808	-	TSC_hg19_v1_chr20_-_48532056 U28164	26845	-	CR749638|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AB023156|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##BC112213|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295803|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK308328|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK131001|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295665|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK310530|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295822|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##NM_015266|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK300318|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AK289644|SPATA2|9825|spermatogenesis associated 2##NM_001135773|SPATA2|9825|spermatogenesis associated 2##BC009481|SPATA2|9825|spermatogenesis associated 2##AB018300|SPATA2|9825|spermatogenesis associated 2##AK023229|SPATA2|9825|spermatogenesis associated 2##U28164|SPATA2|9825|spermatogenesis associated 2	1.012154	CTCF.p2:9:0.978
chr17	49134237	49134363	reg1007512.p1	12.346	+	TSC_hg19_v1_chr17_-_49124138 BC007524 BC059946 AK299553 AK307793 AK295098 AK309214 AK024068 NM_001251971	-10072	-	AK313904 NM_001243877	-188962	-	TSC_hg19_v1_chr17_-_48943716 BC070493 BC098415 NM_001243885 NM_005749	-190604	-	TSC_hg19_v1_chr17_-_49198227 AF327452 BC106048 AK302789 AY850123 AB011088 BC146755 BC153878 AK091921 AX747254 NM_001130527 NM_001130528 NM_003971	63855	-	NM_001018136 TSC_hg19_v1_chr17_+_49230927 AK291105 NM_000269 NM_198175	96611	+	TSC_hg19_v1_chr17_+_49230932 AL360191 AF487339	96632	+	BC007524|SPAG9|9043|sperm associated antigen 9##BC059946|SPAG9|9043|sperm associated antigen 9##AK299553|SPAG9|9043|sperm associated antigen 9##AK307793|SPAG9|9043|sperm associated antigen 9##AK295098|SPAG9|9043|sperm associated antigen 9##AK309214|SPAG9|9043|sperm associated antigen 9##AK024068|SPAG9|9043|sperm associated antigen 9##NM_001251971|SPAG9|9043|sperm associated antigen 9##AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1##BC070493|TOB1|10140|transducer of ERBB2, 1##BC098415|TOB1|10140|transducer of ERBB2, 1##NM_001243885|TOB1|10140|transducer of ERBB2, 1##NM_005749|TOB1|10140|transducer of ERBB2, 1##AF327452|SPAG9|9043|sperm associated antigen 9##AK302789|SPAG9|9043|sperm associated antigen 9##AY850123|SPAG9|9043|sperm associated antigen 9##AB011088|SPAG9|9043|sperm associated antigen 9##BC146755|SPAG9|9043|sperm associated antigen 9##BC153878|SPAG9|9043|sperm associated antigen 9##AK091921|SPAG9|9043|sperm associated antigen 9##NM_001130527|SPAG9|9043|sperm associated antigen 9##NM_001130528|SPAG9|9043|sperm associated antigen 9##NM_003971|SPAG9|9043|sperm associated antigen 9##NM_001018136|NME1-NME2|654364|NME1-NME2 readthrough##AK291105|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_000269|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_198175|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##AL360191|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##AF487339|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in	0.784879	CTCF.p2:3:0.785
chr3	51703403	51703516	reg1006263.p1	12.346	+	AK122683 NM_015106	-127864	+	TSC_hg19_v1_chr3_-_51534015 AB018343 BC110371 NM_001171904 NM_014703	-169453	-	BC022792 TSC_hg19_v1_chr3_-_51533986	-169510	-	NM_001129884 NM_001243727 NM_015926 TSC_hg19_v1_chr3_+_51705247 AK023997 AK222938 AK222949 BC008742 NM_001243725 NM_001243726 AY358972 BC001592	1807	+	NM_000839 NM_001130063 AK315816 AK289984 AK313056 BC041447	37633	+	NM_001143833	109743	-	AK122683|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)##NM_015106|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)##AB018343|VPRBP|9730|Vpr (HIV-1) binding protein##BC110371|VPRBP|9730|Vpr (HIV-1) binding protein##NM_001171904|VPRBP|9730|Vpr (HIV-1) binding protein##NM_014703|VPRBP|9730|Vpr (HIV-1) binding protein##BC022792|VPRBP|9730|Vpr (HIV-1) binding protein##NM_001129884|TEX264|51368|testis expressed 264##NM_001243727|TEX264|51368|testis expressed 264##NM_015926|TEX264|51368|testis expressed 264##AK023997|TEX264|51368|testis expressed 264##AK222938|TEX264|51368|testis expressed 264##AK222949|TEX264|51368|testis expressed 264##BC008742|TEX264|51368|testis expressed 264##NM_001243725|TEX264|51368|testis expressed 264##NM_001243726|TEX264|51368|testis expressed 264##AY358972|TEX264|51368|testis expressed 264##BC001592|TEX264|51368|testis expressed 264##NM_000839|GRM2|2912|glutamate receptor, metabotropic 2##NM_001130063|GRM2|2912|glutamate receptor, metabotropic 2##AK315816|GRM2|2912|glutamate receptor, metabotropic 2##AK289984|GRM2|2912|glutamate receptor, metabotropic 2##AK313056|GRM2|2912|glutamate receptor, metabotropic 2##BC041447|GRM2|2912|glutamate receptor, metabotropic 2##NM_001143833|IQCF6|440956|IQ motif containing F6	0.996909	CTCF.p2:9:0.997
chr2	133304814	133304925	reg1007802.p1	12.345	+	AK122643 NM_001508	-130723	+	BC043584 NM_214461	-745636	-	AF038169 NM_013310	-824806	+	AY358628 BC017318 AK309849 AK075487 TSC_hg19_v1_chr2_-_133427783 AK130005 AK094501 AK123029	122834	-	NM_144586	123611	-	NM_001077427 AK309668	124241	-	AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##AY358628|LYPD1|116372|LY6/PLAUR domain containing 1##BC017318|LYPD1|116372|LY6/PLAUR domain containing 1##AK309849|LYPD1|116372|LY6/PLAUR domain containing 1##AK075487|LYPD1|116372|LY6/PLAUR domain containing 1##AK130005|LYPD1|116372|LY6/PLAUR domain containing 1##AK094501|LYPD1|116372|LY6/PLAUR domain containing 1##AK123029|LYPD1|116372|LY6/PLAUR domain containing 1##NM_144586|LYPD1|116372|LY6/PLAUR domain containing 1##NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1##AK309668|LYPD1|116372|LY6/PLAUR domain containing 1	0.999311	CTCF.p2:-6:0.999
chr8	123745926	123746049	reg1004578.p1	12.345	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-1092361	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1921481	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1921717	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	47924	+	BC042145 TSC_hg19_v1_chr8_+_123794000	48007	+	TSC_hg19_v1_chr8_+_123794108 AB020661	48116	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	1.03983	CTCF.p2:-2:0.999
chr2	2124689	2124808	reg1007791.p1	12.344	+	BC031690 TSC_hg19_v1_chr2_-_1946938	-177842	-	AL133024 TSC_hg19_v1_chr2_-_1926602	-198197	-	TSC_hg19_v1_chr2_-_1748320 BC030834	-376426	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	210217	-	TSC_hg19_v1_chr2_-_2335085 AK307797	210336	-	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	1256808	-	BC031690|MYT1L|23040|myelin transcription factor 1-like##AL133024|MYT1L|23040|myelin transcription factor 1-like##BC030834|PXDN|7837|peroxidasin homolog (Drosophila)##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like##AK307797|MYT1L|23040|myelin transcription factor 1-like##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1	0.99854	CTCF.p2:2:0.999
chr3	53744303	53744443	reg1008181.p1	12.344	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	-215262	+	TSC_hg19_v1_chr3_+_53528709 M76558	-215714	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	-362780	-	TSC_hg19_v1_chr3_-_53880427 NM_018397	136046	-	TSC_hg19_v1_chr3_+_53880576 NM_018725	136199	+	TSC_hg19_v1_chr3_+_53880594 AK307749	136222	+	NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018397|CHDH|55349|choline dehydrogenase##NM_018725|IL17RB|55540|interleukin 17 receptor B##AK307749|IL17RB|55540|interleukin 17 receptor B	0.916904	CTCF.p2:9:0.776
chr12	17092880	17093013	reg1005768.p1	12.343	+	AF258348 BC017777 AB044746 AK095595 AK308826 NM_001001395 NM_001243609	-331905	-	AK308594 AK294909 NM_001243613	-332935	-	BC050085 NM_001243610	-333213	-	AK026308 BC042888 NM_024730	1150136	-	NM_004570	1321527	+	AF532185 NM_033123 AK314516 AY035866 AK292279	1798007	-	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC050085|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243610|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK026308|RERGL|79785|RERG/RAS-like##BC042888|RERGL|79785|RERG/RAS-like##NM_024730|RERGL|79785|RERG/RAS-like##NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1	1.500502	CTCF.p2:42:0.800	CTCF.p2:-46:0.701
chr5	6577138	6577269	reg1006212.p1	12.343	+	TSC_hg19_v1_chr5_+_6449114 AK057805	-128014	+	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	-128350	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	-198553	-	TSC_hg19_v1_chr5_-_6633158 AK291144 BC137083 AK298980	55951	-	TSC_hg19_v1_chr5_-_6633411 AK055456 AB255451 NM_001193455 NM_017755	56206	-	NM_001047 TSC_hg19_v1_chr5_+_6633508	56307	+	AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##AK291144|NSUN2|54888|NOP2/Sun domain family, member 2##BC137083|NSUN2|54888|NOP2/Sun domain family, member 2##AK298980|NSUN2|54888|NOP2/Sun domain family, member 2##AK055456|NSUN2|54888|NOP2/Sun domain family, member 2##AB255451|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001193455|NSUN2|54888|NOP2/Sun domain family, member 2##NM_017755|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001047|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)	0.994858	CTCF.p2:7:0.995
chr8	90996899	90997018	reg1006433.p3	12.343	+	TSC_hg19_v1_chr8_-_90996896 AK001017 AK289848 BC071590 BC040519 BX640816 NM_002485 AK312410	-54	-	TSC_hg19_v1_chr8_-_90996804 AB528582 BC143065 BC143066 BC108650 BC016762 BC005293 AF058696 AF051334 AK223256 BC146797 BC136802 BC136803 BC144413	-126	-	BC031054 NM_001126111 TSC_hg19_v1_chr8_+_90914816	-82164	+	NM_001359 BC105080 BC105082 BC143669 TSC_hg19_v1_chr8_+_91013704 AK300069 L26050	16691	+	AB529128 X06661 BC006478 AK054881 AK312491 BC020864 NM_004929	98057	-	AK300583 AK123958 AL834364 TSC_hg19_v1_chr8_-_91657856	660840	-	AK001017|NBN|4683|nibrin##AK289848|NBN|4683|nibrin##BC071590|NBN|4683|nibrin##BC040519|NBN|4683|nibrin##BX640816|NBN|4683|nibrin##NM_002485|NBN|4683|nibrin##AK312410|NBN|4683|nibrin##BC143065|NBN|4683|nibrin##BC143066|NBN|4683|nibrin##BC108650|NBN|4683|nibrin##BC016762|NBN|4683|nibrin##BC005293|NBN|4683|nibrin##AF058696|NBN|4683|nibrin##AF051334|NBN|4683|nibrin##AK223256|NBN|4683|nibrin##BC146797|NBN|4683|nibrin##BC136802|NBN|4683|nibrin##BC136803|NBN|4683|nibrin##BC144413|NBN|4683|nibrin##BC031054|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_001126111|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_001359|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105080|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105082|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC143669|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK300069|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##L26050|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##X06661|CALB1|793|calbindin 1, 28kDa##BC006478|CALB1|793|calbindin 1, 28kDa##AK054881|CALB1|793|calbindin 1, 28kDa##AK312491|CALB1|793|calbindin 1, 28kDa##BC020864|CALB1|793|calbindin 1, 28kDa##NM_004929|CALB1|793|calbindin 1, 28kDa##AK300583|TMEM64|169200|transmembrane protein 64##AK123958|TMEM64|169200|transmembrane protein 64##AL834364|TMEM64|169200|transmembrane protein 64	0.992095	CTCF.p2:4:0.992
chr14	21131262	21131388	reg1005606.p1	12.342	+	NM_001001968	-21476	-	HQ258082 AY665807 BC130347 BC130349 NM_001024822	-72395	-	BX161458 NM_145250	-72923	-	FJ236304 NM_001145 AK092422 NM_002937	21028	+	TSC_hg19_v1_chr14_+_21152776 AK313989 BC015520 BC054880 BX248010	21451	+	TSC_hg19_v1_chr14_+_21156940 NM_001097577 NM_194431 BC062698 BC020704	25607	+	NM_001001968|OR6S1|341799|olfactory receptor, family 6, subfamily S, member 1##HQ258082|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##AY665807|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BC130347|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BC130349|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##NM_001024822|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BX161458|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##NM_145250|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5##AK092422|RNASE4|6038|ribonuclease, RNase A family, 4##NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4##AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC015520|RNASE4|6038|ribonuclease, RNase A family, 4##BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BX248010|RNASE4|6038|ribonuclease, RNase A family, 4##NM_001097577|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_194431|RNASE4|6038|ribonuclease, RNase A family, 4##BC062698|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC020704|ANG|283|angiogenin, ribonuclease, RNase A family, 5	0.344609	CTCF.p2:-5:0.345
chr17	72956865	72956995	reg1007875.p1	12.342	+	BC143799 AB463989 NM_178233 AB593153	-25036	+	AK000063 NM_178160	-36561	+	BC101096 BC101097 BC101098 BC101099 AK091243 AK296899 AX746872 NM_173477 AK289804	-37631	-	CU690082 AB527292 TSC_hg19_v1_chr17_-_72968758	11824	-	TSC_hg19_v1_chr17_-_72968846 AK304081 BC035372 AK074401 AL137556 AK095565 BC032219 NM_030630	11918	-	TSC_hg19_v1_chr17_+_72983726 AK294006 BC047534 NM_014603	26811	+	BC143799|OTOP3|347741|otopetrin 3##NM_178233|OTOP3|347741|otopetrin 3##AB593153|OTOP3|347741|otopetrin 3##AK000063|OTOP2|92736|otopetrin 2##NM_178160|OTOP2|92736|otopetrin 2##BC101096|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101097|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101098|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101099|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK091243|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK296899|USH1G|124590|Usher syndrome 1G (autosomal recessive)##NM_173477|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK289804|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK304081|C17orf28|283987|chromosome 17 open reading frame 28##BC035372|C17orf28|283987|chromosome 17 open reading frame 28##AK074401|C17orf28|283987|chromosome 17 open reading frame 28##AL137556|C17orf28|283987|chromosome 17 open reading frame 28##AK095565|C17orf28|283987|chromosome 17 open reading frame 28##BC032219|C17orf28|283987|chromosome 17 open reading frame 28##NM_030630|C17orf28|283987|chromosome 17 open reading frame 28##AK294006|CDR2L|30850|cerebellar degeneration-related protein 2-like##BC047534|CDR2L|30850|cerebellar degeneration-related protein 2-like##NM_014603|CDR2L|30850|cerebellar degeneration-related protein 2-like	0.985031	CTCF.p2:13:0.985
chr4	182223033	182223152	reg1007323.p1	12.342	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-3859449	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-3859499	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-3859551	-	TSC_hg19_v1_chr4_+_183065111 AK308489	842033	+	NM_001080477 HE578284 HE578285	1022062	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	1615438	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.818458	CTCF.p2:-4:0.818
chr6	37980499	37980626	reg1007186.p1	12.342	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	-192872	+	TSC_hg19_v1_chr6_+_37787274 NM_021943	-193272	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	-314856	-	BC101354 BC101355 BC101356 BC101357 AK057507 NM_001172418 NM_152733	583240	-	AB067467 TSC_hg19_v1_chr6_-_38607611	627043	-	TSC_hg19_v1_chr6_-_38607697 BX537534	627104	-	AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##BC101354|BTBD9|114781|BTB (POZ) domain containing 9##BC101355|BTBD9|114781|BTB (POZ) domain containing 9##BC101356|BTBD9|114781|BTB (POZ) domain containing 9##BC101357|BTBD9|114781|BTB (POZ) domain containing 9##AK057507|BTBD9|114781|BTB (POZ) domain containing 9##NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9##NM_152733|BTBD9|114781|BTB (POZ) domain containing 9##AB067467|BTBD9|114781|BTB (POZ) domain containing 9##BX537534|BTBD9|114781|BTB (POZ) domain containing 9	0.987289	CTCF.p2:13:0.987
chr4	20686889	20687024	reg1006189.p1	12.341	+	AB017168 NM_004787 BC117190 BC143978 AF133270	-431620	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-2663490	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-2874345	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	15111	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	298673	-	AY118170 DQ148489 NM_147183 AK290998	618613	-	AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4##AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4	0.999623	CTCF.p2:30:1.000
chr4	47124821	47124962	reg1008693.p1	12.341	+	NM_000812 AK296023	-91544	+	AK090780 NM_000809	-128468	-	CU690038 DQ891679 DQ894864 EU176605 U30461 NM_001204266 NM_001204267 BC035055	-129395	-	TSC_hg19_v1_chr4_-_47465683 AY542163 BC015145 NM_017845 AK000509 BC019826 AF182421	340788	-	TSC_hg19_v1_chr4_-_47465720 BC008371	340837	-	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	362439	+	NM_000812|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1##AK296023|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1##AK090780|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_000809|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##AY542163|COMMD8|54951|COMM domain containing 8##BC015145|COMMD8|54951|COMM domain containing 8##NM_017845|COMMD8|54951|COMM domain containing 8##AK000509|COMMD8|54951|COMM domain containing 8##BC019826|COMMD8|54951|COMM domain containing 8##AF182421|COMMD8|54951|COMM domain containing 8##BC008371|COMMD8|54951|COMM domain containing 8##BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D	0.994546	CTCF.p2:0:0.995
chr19	40023516	40023655	reg1005781.p2	12.340	+	TSC_hg19_v1_chr19_-_40023460 BC040157 BC051333 AK096263 NM_152361 BC009725	-98	-	AY324825 NM_182704 BC117331	-17816	+	TSC_hg19_v1_chr19_+_39989603 BC000218 BC011850 DQ891847 DQ895035	-33978	+	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	7235	-	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	69600	+	FJ613352 NM_001190441	122960	+	BC040157|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##BC051333|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##AK096263|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##NM_152361|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##BC009725|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##AY324825|SELV|348303|selenoprotein V##NM_182704|SELV|348303|selenoprotein V##BC117331|SELV|348303|selenoprotein V##BC000218|DLL3|10683|delta-like 3 (Drosophila)##DQ891847|DLL3|10683|delta-like 3 (Drosophila)##DQ895035|DLL3|10683|delta-like 3 (Drosophila)##AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16	0.0	
chr3	114137659	114137792	reg1008036.p1	12.340	+	AF139460 NM_001164342	-35237	-	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	-124872	+	NM_007136 X65233	-181301	-	BC029041 NM_001164347	205327	-	AK315307 NM_001164346 TSC_hg19_v1_chr3_-_114343793	206069	-	AK225788 NM_001164344 NM_001164345	340395	-	AF139460|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164342|ZBTB20|26137|zinc finger and BTB domain containing 20##EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20##AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20	0.99914	CTCF.p2:8:0.999
chr16	75823192	75823344	reg1008018.p1	12.339	+	AK307901 NM_018975 TSC_hg19_v1_chr16_+_75681715 AK000669 BC022428 BC004465 BC005841 BC016739 BC078171 AF289599 AF250393 AB464292 CU678732 AF262988	-141561	+	BC013246 CU678582 DQ892301 DQ895500 TSC_hg19_v1_chr16_-_75681564 BC004132 D31890 AF285758 AK126584 D32053 AK315687 NM_001130089 NM_005548	-141707	-	AK001687 AK314652 TSC_hg19_v1_chr16_-_75657163 BC002758 AK296834 NM_012091	-166082	-	AB051550 NM_033401 TSC_hg19_v1_chr16_+_76311298	487972	+	NM_138994 AK057327 BC017266	520487	+	TSC_hg19_v1_chr16_+_77224857 BC024277 NM_014940	1401574	+	AK307901|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##NM_018975|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AK000669|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC022428|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC004465|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC005841|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC016739|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC078171|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF289599|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF250393|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF262988|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC013246|KARS|3735|lysyl-tRNA synthetase##DQ892301|KARS|3735|lysyl-tRNA synthetase##DQ895500|KARS|3735|lysyl-tRNA synthetase##BC004132|KARS|3735|lysyl-tRNA synthetase##D31890|KARS|3735|lysyl-tRNA synthetase##AF285758|KARS|3735|lysyl-tRNA synthetase##AK126584|KARS|3735|lysyl-tRNA synthetase##D32053|KARS|3735|lysyl-tRNA synthetase##AK315687|KARS|3735|lysyl-tRNA synthetase##NM_001130089|KARS|3735|lysyl-tRNA synthetase##NM_005548|KARS|3735|lysyl-tRNA synthetase##AK001687|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AK314652|ADAT1|23536|adenosine deaminase, tRNA-specific 1##BC002758|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AK296834|ADAT1|23536|adenosine deaminase, tRNA-specific 1##NM_012091|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AB051550|CNTNAP4|85445|contactin associated protein-like 4##NM_033401|CNTNAP4|85445|contactin associated protein-like 4##NM_138994|CNTNAP4|85445|contactin associated protein-like 4##AK057327|CNTNAP4|85445|contactin associated protein-like 4##BC017266|CNTNAP4|85445|contactin associated protein-like 4##BC024277|MON1B|22879|MON1 homolog B (yeast)##NM_014940|MON1B|22879|MON1 homolog B (yeast)	0.993673	CTCF.p2:-11:0.994
chr22	24655570	24655690	reg1005890.p1	12.339	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	-14651	-	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	-78186	+	TSC_hg19_v1_chr22_+_24577424 AK026431	-78203	+	TSC_hg19_v1_chr22_+_24666804 NM_001145468 NM_015330 AK097129 AK301482 AB209022 AL832425 BC005093 BC136471	11210	+	TSC_hg19_v1_chr22_+_24819870 EU036694	164250	+	NM_000675 AK123058 EU036693 AK301420 BC013780	167935	+	CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##AK026431|SUSD2|56241|sushi domain containing 2##NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##EU036694|ADORA2A|135|adenosine A2a receptor##NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor	0.87758	CTCF.p2:30:0.878
chr3	44955503	44955633	reg1007106.p1	12.338	+	NM_003241 AK125536 AK312936 AK300523 BC007003 L34840 U31905 U79008 Y09559 CU675487 DQ896505 EU176444	-39435	+	TSC_hg19_v1_chr3_+_44903403 AL834253 BC019851 NM_144638	-52177	+	TSC_hg19_v1_chr3_+_44803285 AB035898 AK307674 BC117174 BC143752	-152255	+	BC015467 TSC_hg19_v1_chr3_-_45017670 AF247703 NM_001135179 NM_016598	62073	-	TSC_hg19_v1_chr3_+_45017742 AK315741 NM_015004 AK295779	62169	+	TSC_hg19_v1_chr3_+_45017751 BC012831 AB384439 D29958	62192	+	NM_003241|TGM4|7047|transglutaminase 4 (prostate)##AK125536|TGM4|7047|transglutaminase 4 (prostate)##AK312936|TGM4|7047|transglutaminase 4 (prostate)##AK300523|TGM4|7047|transglutaminase 4 (prostate)##BC007003|TGM4|7047|transglutaminase 4 (prostate)##L34840|TGM4|7047|transglutaminase 4 (prostate)##U31905|TGM4|7047|transglutaminase 4 (prostate)##U79008|TGM4|7047|transglutaminase 4 (prostate)##Y09559|TGM4|7047|transglutaminase 4 (prostate)##DQ896505|TGM4|7047|transglutaminase 4 (prostate)##EU176444|TGM4|7047|transglutaminase 4 (prostate)##AL834253|TMEM42|131616|transmembrane protein 42##BC019851|TMEM42|131616|transmembrane protein 42##NM_144638|TMEM42|131616|transmembrane protein 42##AB035898|KIF15|56992|kinesin family member 15##AK307674|KIF15|56992|kinesin family member 15##BC117174|KIF15|56992|kinesin family member 15##BC143752|KIF15|56992|kinesin family member 15##BC015467|ZDHHC3|51304|zinc finger, DHHC-type containing 3##AF247703|ZDHHC3|51304|zinc finger, DHHC-type containing 3##NM_001135179|ZDHHC3|51304|zinc finger, DHHC-type containing 3##NM_016598|ZDHHC3|51304|zinc finger, DHHC-type containing 3##AK315741|EXOSC7|23016|exosome component 7##NM_015004|EXOSC7|23016|exosome component 7##AK295779|EXOSC7|23016|exosome component 7##BC012831|EXOSC7|23016|exosome component 7##D29958|EXOSC7|23016|exosome component 7	0.99592	CTCF.p2:7:0.996
chr13	26148724	26148851	reg1006124.p2	12.336	+	AK302980 TSC_hg19_v1_chr13_+_26042965	-105822	+	TSC_hg19_v1_chr13_+_26042926 AK126031	-105858	+	TSC_hg19_v1_chr13_+_25946121 AK127263 NM_016529	-202635	+	BC132898 BC137092 AY358775 NM_001007538	476393	-	AL133621 TSC_hg19_v1_chr13_-_26789203	640348	-	TSC_hg19_v1_chr13_-_26795853 AY009109 NM_183044	647070	-	AK302980|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK126031|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK127263|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##NM_016529|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##BC132898|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##BC137092|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AY358775|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##NM_001007538|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AL133621|RNF6|6049|ring finger protein (C3H2C3 type) 6##AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6	0.931947	CTCF.p2:-12:0.932
chr20	33796304	33796410	reg1005827.p1	12.336	+	AK314887 NM_006404 BC014451 X89079 L35545 CR456948 DQ892834 DQ896081	-36492	+	CR457266 CU674674 TSC_hg19_v1_chr20_-_33735112 BC016184 AK300212 AY358580 BC001371 AK023931 AK303816 AK001645 NM_001145025 NM_018217	-61233	-	AK096016 AK298794 TSC_hg19_v1_chr20_-_33734933	-61444	-	AB021227 NM_006690 AF131284 DQ300264 BC047614	18211	+	TSC_hg19_v1_chr20_-_33865907 AK296878	69595	-	CR456764 AB463619 DQ892592 DQ895811 TSC_hg19_v1_chr20_-_33872363 AF022229	75983	-	AK314887|PROCR|10544|protein C receptor, endothelial##NM_006404|PROCR|10544|protein C receptor, endothelial##BC014451|PROCR|10544|protein C receptor, endothelial##X89079|PROCR|10544|protein C receptor, endothelial##L35545|PROCR|10544|protein C receptor, endothelial##CR456948|PROCR|10544|protein C receptor, endothelial##DQ892834|PROCR|10544|protein C receptor, endothelial##DQ896081|PROCR|10544|protein C receptor, endothelial##CR457266|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##BC016184|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK300212|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AY358580|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##BC001371|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK023931|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK303816|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK001645|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##NM_001145025|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##NM_018217|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK096016|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK298794|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AB021227|MMP24|10893|matrix metallopeptidase 24 (membrane-inserted)##NM_006690|MMP24|10893|matrix metallopeptidase 24 (membrane-inserted)##AF131284|MMP24|10893|matrix metallopeptidase 24 (membrane-inserted)##DQ300264|MMP24|10893|matrix metallopeptidase 24 (membrane-inserted)##BC047614|MMP24|10893|matrix metallopeptidase 24 (membrane-inserted)##AK296878|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##CR456764|EIF6|3692|eukaryotic translation initiation factor 6##DQ892592|EIF6|3692|eukaryotic translation initiation factor 6##DQ895811|EIF6|3692|eukaryotic translation initiation factor 6##AF022229|EIF6|3692|eukaryotic translation initiation factor 6	0.765417	CTCF.p2:21:0.765
chr6	38461861	38461964	reg1003676.p2	12.335	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	-674222	+	TSC_hg19_v1_chr6_+_37787274 NM_021943	-674622	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	-796206	-	BC101354 BC101355 BC101356 BC101357 AK057507 NM_001172418 NM_152733	101890	-	AB067467 TSC_hg19_v1_chr6_-_38607611	145693	-	TSC_hg19_v1_chr6_-_38607697 BX537534	145754	-	AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##BC101354|BTBD9|114781|BTB (POZ) domain containing 9##BC101355|BTBD9|114781|BTB (POZ) domain containing 9##BC101356|BTBD9|114781|BTB (POZ) domain containing 9##BC101357|BTBD9|114781|BTB (POZ) domain containing 9##AK057507|BTBD9|114781|BTB (POZ) domain containing 9##NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9##NM_152733|BTBD9|114781|BTB (POZ) domain containing 9##AB067467|BTBD9|114781|BTB (POZ) domain containing 9##BX537534|BTBD9|114781|BTB (POZ) domain containing 9	0.993522	CTCF.p2:2:0.994
chr10	99332134	99332242	reg1007869.p1	12.334	+	TSC_hg19_v1_chr10_+_99258879 CU675619	-73270	+	TSC_hg19_v1_chr10_+_99258694 BC007331 NM_024954 AK222597 AK021869	-73468	+	NM_022362 AF319947	-73750	-	AJ583444 AK056990 NM_001129981 NM_020349 BC107759	59	+	AK094791 TSC_hg19_v1_chr10_+_99344126 BC011916 NM_001134670 NM_138413 BC045550 BC057821 AK293733	11917	+	TSC_hg19_v1_chr10_+_99344421 AK289440 CU691258 CU692268 EU831607 EU831618 EU831694 EU831704	12252	+	BC007331|UBTD1|80019|ubiquitin domain containing 1##NM_024954|UBTD1|80019|ubiquitin domain containing 1##AK222597|UBTD1|80019|ubiquitin domain containing 1##AK021869|UBTD1|80019|ubiquitin domain containing 1##NM_022362|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AF319947|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AJ583444|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##AK056990|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##NM_001129981|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##NM_020349|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##BC107759|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##AK094791|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC011916|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##NM_001134670|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##NM_138413|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC045550|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC057821|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##AK289440|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831607|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831618|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831694|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831704|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1	0.998575	CTCF.p2:-6:0.999
chr19	16889750	16889878	reg1006095.p1	12.334	+	BX648940 NM_001007525 CR749794	-59026	+	TSC_hg19_v1_chr19_+_16771949 AK025981 NM_024074 AK292764 BC001195	-117848	+	TSC_hg19_v1_chr19_-_16770956 NM_024104	-118852	-	TSC_hg19_v1_chr19_+_16940221 NM_015260 AB014600 AY706204 BC063531 BC110821 AB463259 BC025026	50388	+	TSC_hg19_v1_chr19_+_16999830 AF055917 NM_003950	110011	+	TSC_hg19_v1_chr19_+_16999929 BC074782 AF080214 AY431102	110121	+	BX648940|NWD1|284434|NACHT and WD repeat domain containing 1##NM_001007525|NWD1|284434|NACHT and WD repeat domain containing 1##CR749794|NWD1|284434|NACHT and WD repeat domain containing 1##AK025981|TMEM38A|79041|transmembrane protein 38A##NM_024074|TMEM38A|79041|transmembrane protein 38A##AK292764|TMEM38A|79041|transmembrane protein 38A##BC001195|TMEM38A|79041|transmembrane protein 38A##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42##NM_015260|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##AB014600|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##AY706204|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BC063531|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BC110821|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BC025026|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##AF055917|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##NM_003950|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##BC074782|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AF080214|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AY431102|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3	0.998778	CTCF.p2:-15:0.999
chr19	50871972	50872098	reg1005384.p1	12.334	+	AF090386 DQ891993 DQ895183 CU676086 AF200345 BC029397 AK308013 AK314364 BC017842 AF098484 NM_004851	-3132	-	BC085008 BC006149 BC111705 BC040958 BC053864 BC065203 BC032360 AF090387 AF098485 AF200344 AK300884 BC019048 AK310134 TSC_hg19_v1_chr19_-_50848025	-24043	-	AF055989 NM_004977	-39402	-	TSC_hg19_v1_chr19_+_50879744 NM_007121 AK297978 BC047750 CR749648 U07132 BC074500 AK290855 BC033500	7692	+	AB209560 TSC_hg19_v1_chr19_+_50887563	15490	+	NM_002691 TSC_hg19_v1_chr19_+_50887592 M80397 M81735 BC008800	15569	+	AF090386|NAPSA|9476|napsin A aspartic peptidase##DQ891993|NAPSA|9476|napsin A aspartic peptidase##DQ895183|NAPSA|9476|napsin A aspartic peptidase##AF200345|NAPSA|9476|napsin A aspartic peptidase##BC029397|NAPSA|9476|napsin A aspartic peptidase##AK308013|NAPSA|9476|napsin A aspartic peptidase##AK314364|NAPSA|9476|napsin A aspartic peptidase##BC017842|NAPSA|9476|napsin A aspartic peptidase##AF098484|NAPSA|9476|napsin A aspartic peptidase##NM_004851|NAPSA|9476|napsin A aspartic peptidase##BC085008|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC006149|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC111705|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC040958|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC053864|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC065203|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC032360|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF090387|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF098485|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF200344|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK300884|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC019048|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK310134|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF055989|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##NM_004977|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##NM_007121|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##AK297978|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##BC047750|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##CR749648|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##U07132|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##BC074500|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##AK290855|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##BC033500|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##AB209560|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##NM_002691|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##M80397|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##M81735|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##BC008800|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa	0.993932	CTCF.p2:-28:0.994
chr22	20365870	20366000	reg1007246.p1	12.334	+	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	-58366	-	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	-110168	-	NM_001243537	-228505	-	NM_001242313	11733	+	BC072398 TSC_hg19_v1_chr22_-_20427830	61895	-	NM_015672	95850	-	CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##NM_001243537|LOC388849|388849|uncharacterized LOC388849##NM_001242313|TMEM191B|728229|transmembrane protein 191B##BC072398|PI4KAP1|728233|phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1##NM_015672|RIMBP3|85376|RIMS binding protein 3	0.962445	CTCF.p2:8:0.962
chr22	46938301	46938406	reg1005106.p1	12.334	+	AF231024 NM_014246 TSC_hg19_v1_chr22_-_46933142	-5239	-	TSC_hg19_v1_chr22_+_46731810 AK303020	-206543	+	TSC_hg19_v1_chr22_+_46731615 AB178028 AK001002 AK295173 AK290712 BC066593 BC080631 CR456445 BC027991 BC012076 AB463324 CU013043 CU013331	-206724	+	CR456470 NM_015124 BC129837 AB463563 CU013020 CU013308	84323	+	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	195726	-	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	195802	-	AF231024|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##NM_014246|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##AK303020|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AB178028|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK001002|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK295173|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK290712|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC066593|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC080631|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456445|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC027991|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC012076|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013043|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013331|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456470|GRAMD4|23151|GRAM domain containing 4##NM_015124|GRAMD4|23151|GRAM domain containing 4##BC129837|GRAMD4|23151|GRAM domain containing 4##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase	0.983577	CTCF.p2:25:0.984
chr3	122398089	122398223	reg1004846.p2	12.334	+	BC101701 BC101703 BC143573 AK097916 NM_152615	-63664	+	TSC_hg19_v1_chr3_+_122296496 AK309863 NM_001113523 BX647656 DQ063586	-101676	+	AF307338 AF307339 TSC_hg19_v1_chr3_-_122283426 NM_001146103 NM_031458	-114684	-	TSC_hg19_v1_chr3_+_122399703 NM_017554 AK304269	1542	+	CU680100 CU687786 DQ893066 DQ896319 AB590214 AK096705 BC063629 TSC_hg19_v1_chr3_-_122512667 AF400663 BC011897 AK289410 NM_024610	114447	-	TSC_hg19_v1_chr3_+_122513913 NM_032839 AK027690 AK291176 BC039821 BC033738	115760	+	BC101701|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BC101703|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BC143573|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##AK097916|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##NM_152615|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##NM_001113523|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BX647656|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##DQ063586|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##AF307338|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##AF307339|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_001146103|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_031458|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_017554|PARP14|54625|poly (ADP-ribose) polymerase family, member 14##AK304269|PARP14|54625|poly (ADP-ribose) polymerase family, member 14##DQ893066|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##DQ896319|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK096705|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC063629|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AF400663|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC011897|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK289410|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##NM_024610|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##NM_032839|DIRC2|84925|disrupted in renal carcinoma 2##AK027690|DIRC2|84925|disrupted in renal carcinoma 2##AK291176|DIRC2|84925|disrupted in renal carcinoma 2##BC039821|DIRC2|84925|disrupted in renal carcinoma 2##BC033738|DIRC2|84925|disrupted in renal carcinoma 2	0.990159	CTCF.p2:8:0.990
chr11	66862522	66862633	reg1005986.p1	12.332	+	TSC_hg19_v1_chr11_+_66824317 BC001338 AF498973 CU674656 DQ891124 DQ894303	-38237	+	TSC_hg19_v1_chr11_+_66824285 NM_014578	-38291	+	NM_177963 AK289672 AK289727 BC037406	-71725	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	24162	+	AK096194 TSC_hg19_v1_chr11_+_67007484	144907	+	TSC_hg19_v1_chr11_+_67007558 AB490246 AK299725	145006	+	BC001338|RHOD|29984|ras homolog gene family, member D##AF498973|RHOD|29984|ras homolog gene family, member D##DQ891124|RHOD|29984|ras homolog gene family, member D##DQ894303|RHOD|29984|ras homolog gene family, member D##NM_014578|RHOD|29984|ras homolog gene family, member D##NM_177963|SYT12|91683|synaptotagmin XII##AK289672|SYT12|91683|synaptotagmin XII##AK289727|SYT12|91683|synaptotagmin XII##BC037406|SYT12|91683|synaptotagmin XII##BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A##AK096194|LOC100131150|100131150|uncharacterized LOC100131150##AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A##AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A	0.873874	CTCF.p2:-7:0.811
chr12	121772679	121772809	reg1007606.p1	12.332	+	AF287630 AF287631 NM_006549 NM_153499 NM_153500 NM_172214 NM_172215 NM_172216	-36634	-	TSC_hg19_v1_chr12_-_121735623 AK292072	-37149	-	TSC_hg19_v1_chr12_-_121734549 NM_172226	-38119	-	BC034243 TSC_hg19_v1_chr12_-_121785683	12923	-	TSC_hg19_v1_chr12_-_121790158 AF191339 CU674542 CU675341	17408	-	TSC_hg19_v1_chr12_-_121790212 BC001081 BC001950 BC006301 AK315451	17445	-	AF287630|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF287631|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_006549|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_153499|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_153500|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172214|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172215|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172216|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK292072|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##BC034243|ANAPC5|51433|anaphase promoting complex subunit 5##AF191339|ANAPC5|51433|anaphase promoting complex subunit 5##BC001081|ANAPC5|51433|anaphase promoting complex subunit 5##BC001950|ANAPC5|51433|anaphase promoting complex subunit 5##BC006301|ANAPC5|51433|anaphase promoting complex subunit 5##AK315451|ANAPC5|51433|anaphase promoting complex subunit 5	0.921945	CTCF.p2:5:0.922
chr5	34486415	34486538	reg1005829.p1	12.332	+	EU399231 EU399232 BC112925 AF329837 BC120990 AF326976 AY358388 AK075533 BX640995 AK315921 AK295968 NM_030945 NM_181435	-443174	-	TSC_hg19_v1_chr5_-_34008240 AK225749	-478232	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	-478313	-	TSC_hg19_v1_chr5_+_34656432 NM_001145522 NM_015577	169937	+	TSC_hg19_v1_chr5_+_34656506 BC052988 AF155135 AK314379	170036	+	AB037755 NM_001145520 TSC_hg19_v1_chr5_+_34656599	170121	+	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK225749|AMACR|23600|alpha-methylacyl-CoA racemase##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001145522|RAI14|26064|retinoic acid induced 14##NM_015577|RAI14|26064|retinoic acid induced 14##BC052988|RAI14|26064|retinoic acid induced 14##AF155135|RAI14|26064|retinoic acid induced 14##AK314379|RAI14|26064|retinoic acid induced 14##AB037755|RAI14|26064|retinoic acid induced 14##NM_001145520|RAI14|26064|retinoic acid induced 14	0.998191	CTCF.p2:-10:0.998
chrX	108956385	108956498	reg1004979.p1	12.332	+	DQ891287 DQ894471 DQ896649 DQ896656 DQ896659 DQ896664 EF535525 BC035330 AJ012743 NM_012282 AK223306 AK314923 DQ192294 TSC_hg19_v1_chrX_-_108868398	-88117	-	AF246127 AJ277591 AJ278323 NM_001242618 TSC_hg19_v1_chrX_+_108780470	-176087	+	NM_001242617 TSC_hg19_v1_chrX_+_108780077 AF201942 BC014888 AF212223	-176358	+	TSC_hg19_v1_chrX_-_108976464 Y12777 Y13058 AB061714 BC034959 AK307566 AK294915	20038	-	TSC_hg19_v1_chrX_-_108976528 AB061713 AK292070 AF030555 NM_004458 NM_022977	20123	-	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	289429	+	DQ891287|KCNE1L|23630|KCNE1-like##DQ894471|KCNE1L|23630|KCNE1-like##DQ896649|KCNE1L|23630|KCNE1-like##DQ896656|KCNE1L|23630|KCNE1-like##DQ896659|KCNE1L|23630|KCNE1-like##DQ896664|KCNE1L|23630|KCNE1-like##EF535525|KCNE1L|23630|KCNE1-like##BC035330|KCNE1L|23630|KCNE1-like##AJ012743|KCNE1L|23630|KCNE1-like##NM_012282|KCNE1L|23630|KCNE1-like##AK223306|KCNE1L|23630|KCNE1-like##AK314923|KCNE1L|23630|KCNE1-like##DQ192294|KCNE1L|23630|KCNE1-like##AF246127|NXT2|55916|nuclear transport factor 2-like export factor 2##AJ277591|NXT2|55916|nuclear transport factor 2-like export factor 2##AJ278323|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242618|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2##AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2##BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2##AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2##Y12777|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y13058|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061714|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##BC034959|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK307566|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK294915|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061713|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK292070|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AF030555|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_004458|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_022977|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164	0.96179	CTCF.p2:-32:0.962
chr1	230446456	230446564	reg1005304.p2	12.331	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-243514	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-243568	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-684496	+	BC150638 NM_024554	66880	-	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	331686	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	331723	+	AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2	0.999558	CTCF.p2:-1:1.000
chr7	100080971	100081129	reg1007501.p1	12.331	+	BC001966 BC031622 AK314824 TSC_hg19_v1_chr7_-_100076802 BC002972 BC010406 AK296580 AK297702 AK310800 BC001486 NM_030935	-4223	-	BC031966 NM_001004323	-19157	-	TSC_hg19_v1_chr7_-_100034098 BC026269 NM_145030	-46973	-	AK124773 NM_173564	499	+	TSC_hg19_v1_chr7_+_100136826 NM_006076 BC009393	55761	+	TSC_hg19_v1_chr7_+_100136847 AK314954 BC017329 AB527774 CU675942	55857	+	BC001966|TSC22D4|81628|TSC22 domain family, member 4##BC031622|TSC22D4|81628|TSC22 domain family, member 4##AK314824|TSC22D4|81628|TSC22 domain family, member 4##BC002972|TSC22D4|81628|TSC22 domain family, member 4##BC010406|TSC22D4|81628|TSC22 domain family, member 4##AK296580|TSC22D4|81628|TSC22 domain family, member 4##AK297702|TSC22D4|81628|TSC22 domain family, member 4##BC001486|TSC22D4|81628|TSC22 domain family, member 4##NM_030935|TSC22D4|81628|TSC22 domain family, member 4##BC031966|C7orf61|402573|chromosome 7 open reading frame 61##NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61##BC026269|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##NM_145030|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##AK124773|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_173564|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_006076|AGFG2|3268|ArfGAP with FG repeats 2##BC009393|AGFG2|3268|ArfGAP with FG repeats 2##AK314954|AGFG2|3268|ArfGAP with FG repeats 2##BC017329|AGFG2|3268|ArfGAP with FG repeats 2	1.511209	CTCF.p2:4:0.947	CTCF.p2:-65:0.564
chrX	33452761	33452882	reg1007774.p1	12.331	+	NM_000109	-95096	-	S60972 X14298 AK309142 TSC_hg19_v1_chrX_-_33229631 M18533 BC010932 NM_004006	-223271	-	NM_004010 S81419 NM_004009 S64152	-306278	-	BC026171 AK292354 NM_203408	697615	-	TSC_hg19_v1_chrX_-_34675406 BC039242 NM_031442	1222587	-	BC035026 NM_152631 AK093101 AX747923 CU690032	1508108	+	NM_000109|DMD|1756|dystrophin##S60972|DMD|1756|dystrophin##X14298|DMD|1756|dystrophin##AK309142|DMD|1756|dystrophin##M18533|DMD|1756|dystrophin##BC010932|DMD|1756|dystrophin##NM_004006|DMD|1756|dystrophin##NM_004010|DMD|1756|dystrophin##S81419|DMD|1756|dystrophin##NM_004009|DMD|1756|dystrophin##S64152|DMD|1756|dystrophin##BC026171|FAM47A|158724|family with sequence similarity 47, member A##AK292354|FAM47A|158724|family with sequence similarity 47, member A##NM_203408|FAM47A|158724|family with sequence similarity 47, member A##BC039242|TMEM47|83604|transmembrane protein 47##NM_031442|TMEM47|83604|transmembrane protein 47##BC035026|FAM47B|170062|family with sequence similarity 47, member B##NM_152631|FAM47B|170062|family with sequence similarity 47, member B##AK093101|FAM47B|170062|family with sequence similarity 47, member B	0.773253	CTCF.p2:-1:0.773
chr2	100859498	100859640	reg1008128.p1	12.330	+	BC036895 TSC_hg19_v1_chr2_-_100759026 NM_002285	-100566	-	TSC_hg19_v1_chr2_-_100722359 AK297407 AK092327 AX747484	-137111	-	TSC_hg19_v1_chr2_-_100722267 AK308645	-137301	-	DQ020495 NM_198461	79625	-	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	174528	-	AB164464 NM_001011717	227374	+	BC036895|AFF3|3899|AF4/FMR2 family, member 3##NM_002285|AFF3|3899|AF4/FMR2 family, member 3##AK297407|AFF3|3899|AF4/FMR2 family, member 3##AK092327|AFF3|3899|AF4/FMR2 family, member 3##AK308645|AFF3|3899|AF4/FMR2 family, member 3##DQ020495|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##NM_198461|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S	0.997712	CTCF.p2:13:0.998
chr21	37876677	37876800	reg1005702.p1	12.329	+	AF314090 AY355348 NM_001146079 NM_144492	-24351	-	BC012126 NM_012130 AY355349	-38007	-	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	-119048	+	AJ566765 NM_001146078	38159	-	AJ566766 NM_001146077	72128	-	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	194702	+	AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AJ566765|CLDN14|23562|claudin 14##NM_001146078|CLDN14|23562|claudin 14##AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14	0.754263	CTCF.p2:-18:0.754
chr17	25978550	25978682	reg1006988.p1	12.328	+	TSC_hg19_v1_chr17_+_25958264 AB003517 AB008492	-20344	+	TSC_hg19_v1_chr17_+_25958246 BC105942 BC105944	-20368	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	-20388	+	U31511 TSC_hg19_v1_chr17_-_26127402	148782	-	BC130283 BC144126 U05810 L09210 X73029 AF068236 AK304252 NM_000625 TSC_hg19_v1_chr17_-_26127556	148899	-	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	241775	-	AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC105942|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC105944|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9##U31511|NOS2|4843|nitric oxide synthase 2, inducible##BC130283|NOS2|4843|nitric oxide synthase 2, inducible##BC144126|NOS2|4843|nitric oxide synthase 2, inducible##U05810|NOS2|4843|nitric oxide synthase 2, inducible##L09210|NOS2|4843|nitric oxide synthase 2, inducible##X73029|NOS2|4843|nitric oxide synthase 2, inducible##AF068236|NOS2|4843|nitric oxide synthase 2, inducible##AK304252|NOS2|4843|nitric oxide synthase 2, inducible##NM_000625|NOS2|4843|nitric oxide synthase 2, inducible##AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108	0.891953	CTCF.p2:19:0.892
chr18	49147618	49147743	reg1007434.p1	12.328	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-423640	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-423968	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-424454	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	718861	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	719433	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2543312	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.149455	
chr22	25940043	25940168	reg1007733.p1	12.328	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	-96029	+	BC139736 NM_001135772	-162562	-	AL137651 NM_182492	-181582	-	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	20694	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	20841	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	198015	+	BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB	0.24918	CTCF.p2:-9:0.249
chr12	54595237	54595340	reg1005924.p2	12.327	+	BC088352 BC000417 TSC_hg19_v1_chr12_-_54582755 AK091468 AX747003 NM_001243789 NM_001243790 BC105607 AK001789 AK001235 AK222473 AK290274 NM_001243787 NM_001243788 NM_001243791 NM_014311	-12602	-	BC030212 TSC_hg19_v1_chr12_-_54541132	-54207	-	TSC_hg19_v1_chr12_+_54519846 BC009385	-75430	+	BC006821 NM_001127322 TSC_hg19_v1_chr12_-_54653330	58036	-	NM_001127321 TSC_hg19_v1_chr12_-_54653370	58083	-	TSC_hg19_v1_chr12_-_54673880 L07515 S62077	78594	-	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC009385|LOC400043|400043|uncharacterized LOC400043##BC006821|CBX5|23468|chromobox homolog 5##NM_001127322|CBX5|23468|chromobox homolog 5##NM_001127321|CBX5|23468|chromobox homolog 5##L07515|CBX5|23468|chromobox homolog 5##S62077|CBX5|23468|chromobox homolog 5	1.006664	CTCF.p2:-7:0.986
chr3	132760204	132760350	reg1007862.p1	12.327	+	TSC_hg19_v1_chr3_+_132757234 AY358381 BC000568	-3043	+	NM_001136469 NM_023943 TSC_hg19_v1_chr3_+_132757202	-3090	+	AB082531 NM_153240 TSC_hg19_v1_chr3_-_132441315	-318969	-	NM_003571 BC113518 BC113520 HQ258421 U48224	358581	+	TSC_hg19_v1_chr3_+_133292443 NM_001134422 NM_017548	532199	+	TSC_hg19_v1_chr3_+_133292588 AF103803	532295	+	AY358381|TMEM108|66000|transmembrane protein 108##BC000568|TMEM108|66000|transmembrane protein 108##NM_001136469|TMEM108|66000|transmembrane protein 108##NM_023943|TMEM108|66000|transmembrane protein 108##AB082531|NPHP3-ACAD11|100532724|NPHP3-ACAD11 readthrough##NM_153240|NPHP3|27031|nephronophthisis 3 (adolescent)##NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin##HQ258421|BFSP2|8419|beaded filament structural protein 2, phakinin##U48224|BFSP2|8419|beaded filament structural protein 2, phakinin##NM_001134422|CDV3|55573|CDV3 homolog (mouse)##NM_017548|CDV3|55573|CDV3 homolog (mouse)##AF103803|CDV3|55573|CDV3 homolog (mouse)	0.999083	CTCF.p2:-20:0.999
chr5	133280067	133280192	reg1005913.p1	12.327	+	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	-331891	-	TSC_hg19_v1_chr5_-_132948202 AK055684	-331930	-	TSC_hg19_v1_chr5_+_132432890 AK315862	-847238	+	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	24246	-	TSC_hg19_v1_chr5_-_133340377 BC008482	60238	-	TSC_hg19_v1_chr5_-_133340386 BC090042	60254	-	NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##AK055684|FSTL4|23105|follistatin-like 4##AK315862|HSPA4|3308|heat shock 70kDa protein 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15##BC008482|VDAC1|7416|voltage-dependent anion channel 1##BC090042|VDAC1|7416|voltage-dependent anion channel 1	0.995764	CTCF.p2:7:0.996
chr9	45415564	45415709	reg1007717.p1	12.327	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-1730793	+	NM_001145196	-1784907	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-2282149	-	TSC_hg19_v1_chr9_+_45441926 BC006438	26290	+	BC040528 NM_001113541 NM_015667	20093973	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	21041665	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.978389	CTCF.p2:-1:0.978
chr10	88448197	88448322	reg1005554.p1	12.326	+	AK304760 TSC_hg19_v1_chr10_+_88428267 AK300692 AK297871 NM_001080116 AJ133766 BC010929 NM_001080114 NM_001080115 NM_001171611 NM_007078 AB014513 AF276807 AF276808 AF276809 AJ133767 AJ133768	-19904	+	TSC_hg19_v1_chr10_+_88428170 NM_001171610	-20073	+	TSC_hg19_v1_chr10_+_88426539 AK294696	-21714	+	TSC_hg19_v1_chr10_+_88516526 NM_004329 BC028383 AK291764 Z22535	68228	+	TSC_hg19_v1_chr10_-_88717330 BC072456 AK304727 AK023527 AK293822 BC094744 BC064415 AK308401 NM_024756	269112	-	NM_003087 AK223367 AK311652 BC014098 AK312141 AF017256 AF411524 EU019993 AF010126 DQ892334 DQ892505 DQ895719 EU176715 AB464279 CR541788 CR541790	270111	+	AK304760|LDB3|11155|LIM domain binding 3##AK300692|LDB3|11155|LIM domain binding 3##AK297871|LDB3|11155|LIM domain binding 3##NM_001080116|LDB3|11155|LIM domain binding 3##AJ133766|LDB3|11155|LIM domain binding 3##BC010929|LDB3|11155|LIM domain binding 3##NM_001080114|LDB3|11155|LIM domain binding 3##NM_001080115|LDB3|11155|LIM domain binding 3##NM_001171611|LDB3|11155|LIM domain binding 3##NM_007078|LDB3|11155|LIM domain binding 3##AB014513|LDB3|11155|LIM domain binding 3##AF276807|LDB3|11155|LIM domain binding 3##AF276808|LDB3|11155|LIM domain binding 3##AF276809|LDB3|11155|LIM domain binding 3##AJ133767|LDB3|11155|LIM domain binding 3##AJ133768|LDB3|11155|LIM domain binding 3##NM_001171610|LDB3|11155|LIM domain binding 3##AK294696|LDB3|11155|LIM domain binding 3##NM_004329|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC028383|BMPR1A|657|bone morphogenetic protein receptor, type IA##AK291764|BMPR1A|657|bone morphogenetic protein receptor, type IA##Z22535|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC072456|MMRN2|79812|multimerin 2##AK304727|MMRN2|79812|multimerin 2##AK023527|MMRN2|79812|multimerin 2##AK293822|MMRN2|79812|multimerin 2##BC094744|MMRN2|79812|multimerin 2##BC064415|MMRN2|79812|multimerin 2##AK308401|MMRN2|79812|multimerin 2##NM_024756|MMRN2|79812|multimerin 2##NM_003087|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK223367|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##BC014098|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK312141|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF017256|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF411524|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU019993|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF010126|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892334|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892505|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ895719|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU176715|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541788|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541790|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)	0.578191	CTCF.p2:-7:0.578
chr11	61875590	61875698	reg1005881.p2	12.326	+	TSC_hg19_v1_chr11_+_61735277 AK093779 AX748301 BC132894 BC132896	-140310	+	TSC_hg19_v1_chr11_-_61735173 NM_002032	-140497	-	BC020300 BC015946 BC063514 TSC_hg19_v1_chr11_-_61735103 BC011359 BC070494 AB062402 BC013724 BC073750 BC000857 BC035441 AK307190 AK311818 BC016009 BC066341 BC066961 BC104643 BC105802 L20941 D28463	-140557	-	TSC_hg19_v1_chr11_+_61891482 AK307633 BC098576 NM_001040694 NM_020238 AK056195 AK310714 BC032678	15828	+	BC062693 AJ224171 BC069170 BC069289 NM_006552	82054	+	AF071219 NM_002407 BC062218 AJ224173	100507	+	AK093779|LOC399900|399900|uncharacterized LOC399900##BC132894|LOC399900|399900|uncharacterized LOC399900##BC132896|LOC399900|399900|uncharacterized LOC399900##NM_002032|FTH1|2495|ferritin, heavy polypeptide 1##BC020300|FTH1|2495|ferritin, heavy polypeptide 1##BC015946|FTH1|2495|ferritin, heavy polypeptide 1##BC063514|FTH1|2495|ferritin, heavy polypeptide 1##BC011359|FTH1|2495|ferritin, heavy polypeptide 1##BC070494|FTH1|2495|ferritin, heavy polypeptide 1##AB062402|FTH1|2495|ferritin, heavy polypeptide 1##BC013724|FTH1|2495|ferritin, heavy polypeptide 1##BC073750|FTH1|2495|ferritin, heavy polypeptide 1##BC000857|FTH1|2495|ferritin, heavy polypeptide 1##BC035441|FTH1|2495|ferritin, heavy polypeptide 1##AK307190|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK311818|FTH1|2495|ferritin, heavy polypeptide 1##BC016009|FTH1|2495|ferritin, heavy polypeptide 1##BC066341|FTH1|2495|ferritin, heavy polypeptide 1##BC066961|FTH1|2495|ferritin, heavy polypeptide 1##BC104643|FTH1|2495|ferritin, heavy polypeptide 1##BC105802|FTH1|2495|ferritin, heavy polypeptide 1##L20941|FTH1|2495|ferritin, heavy polypeptide 1##D28463|FTH1|2495|ferritin, heavy polypeptide 1##AK307633|INCENP|3619|inner centromere protein antigens 135/155kDa##BC098576|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_001040694|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_020238|INCENP|3619|inner centromere protein antigens 135/155kDa##AK056195|INCENP|3619|inner centromere protein antigens 135/155kDa##AK310714|INCENP|3619|inner centromere protein antigens 135/155kDa##BC032678|INCENP|3619|inner centromere protein antigens 135/155kDa##BC062693|SCGB1D1|10648|secretoglobin, family 1D, member 1##AJ224171|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069170|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069289|SCGB1D1|10648|secretoglobin, family 1D, member 1##NM_006552|SCGB1D1|10648|secretoglobin, family 1D, member 1##AF071219|SCGB2A1|4246|secretoglobin, family 2A, member 1##NM_002407|SCGB2A1|4246|secretoglobin, family 2A, member 1##BC062218|SCGB2A1|4246|secretoglobin, family 2A, member 1##AJ224173|SCGB2A1|4246|secretoglobin, family 2A, member 1	0.997204	CTCF.p2:17:0.997
chr12	12717079	12717211	reg1006320.p1	12.326	+	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	-1745	-	TSC_hg19_v1_chr12_+_12510051 NM_058169 AK075028 BC013668 AY037865 AY037866 DQ891778 DQ894962 CU680646	-206980	+	AY358563 TSC_hg19_v1_chr12_-_12503210 AK023622 NM_018050 AK001160 BC032998	-213973	-	TSC_hg19_v1_chr12_+_12764831 BC106052 AF039081 NM_001310 AK307202	47650	+	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	47738	+	AK096388 NM_006143	131975	-	AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16##NM_058169|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AK075028|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##BC013668|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037865|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037866|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ891778|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ894962|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY358563|MANSC1|54682|MANSC domain containing 1##AK023622|MANSC1|54682|MANSC domain containing 1##NM_018050|MANSC1|54682|MANSC domain containing 1##AK001160|MANSC1|54682|MANSC domain containing 1##BC032998|MANSC1|54682|MANSC domain containing 1##BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2##AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2##AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2##BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2##AK096388|GPR19|2842|G protein-coupled receptor 19##NM_006143|GPR19|2842|G protein-coupled receptor 19	0.839929	CTCF.p2:0:0.740
chr17	46103902	46104019	reg1005300.p1	12.326	+	AF343090 TSC_hg19_v1_chr17_+_46048487 AF110322 AK225274 BC072435 AB062433 BC009957	-55466	+	TSC_hg19_v1_chr17_+_46048471 AF217982 AK023722	-55491	+	AK223387 NM_176096 TSC_hg19_v1_chr17_+_46048452	-55528	+	TSC_hg19_v1_chr17_-_46115160 AB590254 DQ893053 DQ896301 AB047849 BC015924 AB037938 NM_016429	11190	-	TSC_hg19_v1_chr17_+_46125712 NM_003204 BC010623 AK090459	21739	+	AL833530 TSC_hg19_v1_chr17_+_46125724	21764	+	AF343090|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF110322|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK225274|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC072435|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AB062433|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC009957|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF217982|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK023722|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK223387|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##NM_176096|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##DQ893053|COPZ2|51226|coatomer protein complex, subunit zeta 2##DQ896301|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB047849|COPZ2|51226|coatomer protein complex, subunit zeta 2##BC015924|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB037938|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_016429|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	0.994964	CTCF.p2:-1:0.995
chr4	142228450	142228581	reg1006103.p1	12.325	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-86429	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-86460	+	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	-173984	-	AK290619 NM_000585 NM_172175 BC018149 U14407	329251	+	NM_001101669 NM_003866	1539088	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	1877549	+	AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38	0.885786	CTCF.p2:-18:0.886
chr11	75258722	75258850	reg1006187.p1	12.324	+	AF318377 TSC_hg19_v1_chr11_-_75236890	-21908	-	BC090053 AF318351 NM_030792	-22278	-	TSC_hg19_v1_chr11_-_75141540 NM_001039548	-117191	-	NM_001207014 NM_001235 TSC_hg19_v1_chr11_+_75273168 AK290124	14349	+	TSC_hg19_v1_chr11_+_75273296 AK297811 AK130870 AK309905 BC070087 BC014623 D83174 AY264853 BC036298 AK122936	14543	+	TSC_hg19_v1_chr11_-_75379154 BC063860 BC041411	120369	-	AF318377|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##NM_001039548|KLHL35|283212|kelch-like 35 (Drosophila)##NM_001207014|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##NM_001235|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK290124|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK297811|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK130870|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK309905|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC070087|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC014623|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##D83174|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AY264853|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC036298|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK122936|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC063860|MAP6|4135|microtubule-associated protein 6##BC041411|MAP6|4135|microtubule-associated protein 6	0.995956	CTCF.p2:-5:0.996
chr1	42639127	42639244	reg1007718.p1	12.324	+	M95174 M97496 NM_033553	-8795	-	NM_007102 U34279 BC093781 Z50753 BC093779 BC069301	-20089	+	TSC_hg19_v1_chr1_-_42501606 BC046120	-137556	-	TSC_hg19_v1_chr1_-_42776761 AB463045	137576	-	TSC_hg19_v1_chr1_-_42800873 AB028964 BC152441 NM_001198851 BC151828	161567	-	TSC_hg19_v1_chr1_-_42800884 BC014182 NM_001198852	161705	-	M95174|GUCA2A|2980|guanylate cyclase activator 2A (guanylin)##M97496|GUCA2A|2980|guanylate cyclase activator 2A (guanylin)##NM_033553|GUCA2A|2980|guanylate cyclase activator 2A (guanylin)##NM_007102|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##U34279|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC093781|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##Z50753|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC093779|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC069301|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB028964|FOXJ3|22887|forkhead box J3##BC152441|FOXJ3|22887|forkhead box J3##NM_001198851|FOXJ3|22887|forkhead box J3##BC151828|FOXJ3|22887|forkhead box J3##BC014182|FOXJ3|22887|forkhead box J3##NM_001198852|FOXJ3|22887|forkhead box J3	0.999075	CTCF.p2:-5:0.999
chr2	97626257	97626371	reg1006017.p1	12.324	+	BC038583 BC051379 NM_016490	-62465	-	AF151068 NM_001172667	-65438	-	TSC_hg19_v1_chr2_-_97535818 AY358842 NM_017789	-90553	-	NM_001122646	25986	-	TSC_hg19_v1_chr2_-_97760578 AK295056 BC064511 NM_199336	134277	-	AY358571 NM_001164315 BX647769 TSC_hg19_v1_chr2_+_97779310 AK304740 AK316541 AK307629 BC046186 BC128262 BC128517 CU692324	153039	+	BC038583|FAM178B|51252|family with sequence similarity 178, member B##BC051379|FAM178B|51252|family with sequence similarity 178, member B##NM_016490|FAM178B|51252|family with sequence similarity 178, member B##AF151068|FAM178B|51252|family with sequence similarity 178, member B##NM_001172667|FAM178B|51252|family with sequence similarity 178, member B##AY358842|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##NM_017789|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##NM_001122646|FAM178B|51252|family with sequence similarity 178, member B##AK295056|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##BC064511|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##NM_199336|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##AY358571|ANKRD36|375248|ankyrin repeat domain 36##NM_001164315|ANKRD36|375248|ankyrin repeat domain 36##BX647769|ANKRD36|375248|ankyrin repeat domain 36##AK304740|ANKRD36|375248|ankyrin repeat domain 36##AK316541|ANKRD36|375248|ankyrin repeat domain 36##AK307629|ANKRD36|375248|ankyrin repeat domain 36##BC046186|ANKRD36|375248|ankyrin repeat domain 36##BC128262|ANKRD36|375248|ankyrin repeat domain 36##BC128517|ANKRD36|375248|ankyrin repeat domain 36	0.974307	CTCF.p2:8:0.974
chr7	143916305	143916438	reg1007056.p1	12.324	+	BC136868 BC136878 EF560743 AK125680 NM_001003702	-23652	-	NM_198495 AK292236	-35819	+	BC136889 NM_001001659	-90194	+	NM_001001802 NM_001005287	13564	-	NM_001005328 BC136704 BC136711	40396	-	AK292236 NM_198495	50014	-	BC136868|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##BC136878|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##EF560743|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##AK125680|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##NM_001003702|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##NM_198495|CTAGE4|100128553|CTAGE family, member 4##AK292236|CTAGE8|100142659|CTAGE family, member 8##BC136889|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14##NM_001001659|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14##NM_001001802|OR2A42|402317|olfactory receptor, family 2, subfamily A, member 42##NM_001005287|OR2A1|346528|olfactory receptor, family 2, subfamily A, member 1##NM_001005328|OR2A7|401427|olfactory receptor, family 2, subfamily A, member 7##BC136704|OR2A7|401427|olfactory receptor, family 2, subfamily A, member 7##BC136711|OR2A7|401427|olfactory receptor, family 2, subfamily A, member 7##AK292236|CTAGE8|100142659|CTAGE family, member 8##NM_198495|CTAGE4|100128553|CTAGE family, member 4	0.984222	CTCF.p2:17:0.984
chr18	33676015	33676161	reg1007681.p1	12.323	+	AK001518 AK292907 TSC_hg19_v1_chr18_-_33647523	-28536	-	BC010136 TSC_hg19_v1_chr18_-_33647520	-28569	-	TSC_hg19_v1_chr18_-_33647515 DQ892910 EU176720 AF419845 NM_018170 BC000225 AK314569	-28661	-	U41060 AK304079 TSC_hg19_v1_chr18_-_33709301 AK301539 BC039498 NM_001099406 NM_012319	33203	-	NM_001242875 NM_001242876 NM_001242877 NM_001242878 NM_001242879 NM_018255 TSC_hg19_v1_chr18_+_33709861 AF403223 AK293051 AK302062	33767	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	33800	+	AK001518|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK292907|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC010136|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##DQ892910|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##EU176720|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AF419845|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##NM_018170|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC000225|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK314569|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##U41060|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6##AK304079|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6##AK301539|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6##BC039498|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6##NM_001099406|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6##NM_012319|SLC39A6|25800|solute carrier family 39 (zinc transporter), member 6##NM_001242875|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242876|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242877|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242878|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242879|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_018255|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AF403223|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK293051|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK302062|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)	0.954088	CTCF.p2:-13:0.954
chrX	134611595	134611729	reg1008931.p1	12.323	+	BC030620 TSC_hg19_v1_chrX_+_134555878 BC051704	-55788	+	AY927530 NM_152695 TSC_hg19_v1_chrX_+_134478720 AK314344 AK074194 AL833407 AY280801 BC060768 BC065938 AL833109	-132938	+	TSC_hg19_v1_chrX_-_134478038 AL831984 BC029787	-133659	-	TSC_hg19_v1_chrX_+_134654584 BX648113 NM_182540 AK096544 AL833319	42907	+	TSC_hg19_v1_chrX_+_134654737 BC140715 AK308423	43069	+	AY743709 NM_001017417 BC140735 BC140926 BC144437 BC140913	235572	+	BC030620|LINC00086|399668|long intergenic non-protein coding RNA 86##BC051704|LINC00086|399668|long intergenic non-protein coding RNA 86##AY927530|ZNF449|203523|zinc finger protein 449##NM_152695|ZNF449|203523|zinc finger protein 449##AK314344|ZNF449|203523|zinc finger protein 449##AK074194|ZNF449|203523|zinc finger protein 449##AL833407|ZNF449|203523|zinc finger protein 449##AY280801|ZNF449|203523|zinc finger protein 449##BC060768|ZNF449|203523|zinc finger protein 449##BC065938|ZNF449|203523|zinc finger protein 449##AL833109|ZNF449|203523|zinc finger protein 449##AL831984|ZNF75D|7626|zinc finger protein 75D##BC029787|ZNF75D|7626|zinc finger protein 75D##BX648113|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##NM_182540|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK096544|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AL833319|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BC140715|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK308423|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AY743709|CT45A1|541466|cancer/testis antigen family 45, member A1##NM_001017417|CT45A1|541466|cancer/testis antigen family 45, member A1##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1	0.447238	CTCF.p2:6:0.447
chr3	30240692	30240828	reg1007749.p1	12.321	+	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	-917796	+	NM_001040432	-1808774	+	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	-1850199	-	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	407262	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	407643	+	AL832766 NM_207359	695392	-	NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1	0.983791	CTCF.p2:25:0.984
chr1	120874507	120874639	reg1007270.p1	12.319	+	NM_001100910	-35569	+	TSC_hg19_v1_chr1_-_120612318 NM_001200001 NM_024408	-262258	-	TSC_hg19_v1_chr1_-_120612272 BC071562	-262307	-	L03419 L03420 TSC_hg19_v1_chr1_-_120935918 BC110416 AK308886	61336	-	AK291502 AK307244 AK311502 NM_001004340 NM_001017986 NM_001244910 TSC_hg19_v1_chr1_-_120935945	61379	-	CR936796 TSC_hg19_v1_chr1_+_142618815 AK056396 AF277188	21744273	+	NM_001100910|FAM72B|653820|family with sequence similarity 72, member B##NM_001200001|NOTCH2|4853|notch 2##NM_024408|NOTCH2|4853|notch 2##BC071562|NOTCH2|4853|notch 2##L03419|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##L03420|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##BC110416|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK308886|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK291502|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK307244|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK311502|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001004340|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001017986|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001244910|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)	0.994975	CTCF.p2:24:0.995
chr2	207256977	207257099	reg1005843.p1	12.319	+	TSC_hg19_v1_chr2_+_207139414 AK127271 NM_020923	-117571	+	AK312917 BC067833 AK290976 NM_001098199 NM_005279	-174340	-	TSC_hg19_v1_chr2_+_207024617 AK291910 AK310096 D28350 BC067787 BC029316 BC004931 AB529032 CU688340 BT007079 CR456825	-232380	+	TSC_hg19_v1_chr2_+_207308286 AB009672 NM_003812 BC132763 BC132765	51295	+	AK129906 TSC_hg19_v1_chr2_+_207406857	149798	+	NM_001102659	250103	+	AK127271|ZDBF2|57683|zinc finger, DBF-type containing 2##NM_020923|ZDBF2|57683|zinc finger, DBF-type containing 2##AK312917|GPR1|2825|G protein-coupled receptor 1##BC067833|GPR1|2825|G protein-coupled receptor 1##AK290976|GPR1|2825|G protein-coupled receptor 1##NM_001098199|GPR1|2825|G protein-coupled receptor 1##NM_005279|GPR1|2825|G protein-coupled receptor 1##AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##D28350|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##AB009672|ADAM23|8745|ADAM metallopeptidase domain 23##NM_003812|ADAM23|8745|ADAM metallopeptidase domain 23##BC132763|ADAM23|8745|ADAM metallopeptidase domain 23##BC132765|ADAM23|8745|ADAM metallopeptidase domain 23##AK129906|ADAM23|8745|ADAM metallopeptidase domain 23##NM_001102659|LOC200726|200726|hCG1657980	0.173156	
chr1	206173702	206173813	reg1005776.p2	12.318	+	BC035696 NM_001123168 BC137545 BC137546	-34841	+	TSC_hg19_v1_chr1_-_206137445 AK124556	-36309	-	BC151208 BC136538 BC144233 AF331525 NM_052934 NM_134325	-261191	-	NM_000707 AF030512 AF101726 L37112 AB528977 EU432111	50604	+	AK122631 NM_001007544	114889	-	NM_001910 NM_148964 AJ250716 AJ250717 BC042537 TSC_hg19_v1_chr1_+_206317529 J05036 AK292057 CU692090 AK298069	143774	+	BC035696|FAM72A|729533|family with sequence similarity 72, member A##NM_001123168|FAM72A|729533|family with sequence similarity 72, member A##BC137545|FAM72A|729533|family with sequence similarity 72, member A##BC137546|FAM72B|653820|family with sequence similarity 72, member B##AK124556|LOC100132966|100132966|uncharacterized LOC100132966##BC151208|SLC26A9|115019|solute carrier family 26, member 9##BC136538|SLC26A9|115019|solute carrier family 26, member 9##BC144233|SLC26A9|115019|solute carrier family 26, member 9##AF331525|SLC26A9|115019|solute carrier family 26, member 9##NM_052934|SLC26A9|115019|solute carrier family 26, member 9##NM_134325|SLC26A9|115019|solute carrier family 26, member 9##NM_000707|AVPR1B|553|arginine vasopressin receptor 1B##AF030512|AVPR1B|553|arginine vasopressin receptor 1B##AF101726|AVPR1B|553|arginine vasopressin receptor 1B##L37112|AVPR1B|553|arginine vasopressin receptor 1B##EU432111|AVPR1B|553|arginine vasopressin receptor 1B##AK122631|C1orf186|440712|chromosome 1 open reading frame 186##NM_001007544|C1orf186|440712|chromosome 1 open reading frame 186##NM_001910|CTSE|1510|cathepsin E##NM_148964|CTSE|1510|cathepsin E##AJ250716|CTSE|1510|cathepsin E##AJ250717|CTSE|1510|cathepsin E##BC042537|CTSE|1510|cathepsin E##J05036|CTSE|1510|cathepsin E##AK292057|CTSE|1510|cathepsin E##AK298069|CTSE|1510|cathepsin E	0.994975	CTCF.p2:6:0.995
chr20	22672404	22672524	reg1006479.p1	12.318	+	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	-106362	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	-107389	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	-107548	-	TSC_hg19_v1_chr20_+_23015949 BC117270 BC117272 NM_001052 BC069063	343570	+	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	357774	-	TSC_hg19_v1_chr20_-_23062805 AK056764	390348	-	AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##BC117270|SSTR4|6754|somatostatin receptor 4##BC117272|SSTR4|6754|somatostatin receptor 4##NM_001052|SSTR4|6754|somatostatin receptor 4##BC069063|SSTR4|6754|somatostatin receptor 4##BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##AK056764|CD93|22918|CD93 molecule	0.995257	CTCF.p2:-15:0.995
chr5	114433934	114434062	reg1006233.p1	12.317	+	BC015371 NM_170775 BC040722	-664749	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	-735537	+	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	-735949	+	TSC_hg19_v1_chr5_-_114505606 AK316422 AK296389	71606	-	AB196558 AJ272269 BC130334 AK125426 BC045164 BC046096 NM_001017397 NM_001017398 NM_018700	81989	-	AY780790 AB590094 TSC_hg19_v1_chr5_-_114598563 NM_005023	164568	-	BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK316422|TRIM36|55521|tripartite motif containing 36##AK296389|TRIM36|55521|tripartite motif containing 36##AB196558|TRIM36|55521|tripartite motif containing 36##AJ272269|TRIM36|55521|tripartite motif containing 36##BC130334|TRIM36|55521|tripartite motif containing 36##AK125426|TRIM36|55521|tripartite motif containing 36##BC045164|TRIM36|55521|tripartite motif containing 36##BC046096|TRIM36|55521|tripartite motif containing 36##NM_001017397|TRIM36|55521|tripartite motif containing 36##NM_001017398|TRIM36|55521|tripartite motif containing 36##NM_018700|TRIM36|55521|tripartite motif containing 36##AY780790|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##NM_005023|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit	0.721929	CTCF.p2:-16:0.722
chr20	30924839	30924952	reg1007003.p1	12.316	+	TSC_hg19_v1_chr20_+_30865453 NM_004798 AK302403 AB002357	-59409	+	TSC_hg19_v1_chr20_+_30795710 CU674282 AL832023	-129164	+	D80002 TSC_hg19_v1_chr20_+_30795698	-129197	+	TSC_hg19_v1_chr20_+_30946303 NM_001164603 NM_015338 BC100280 BC064984 BC137278 BC137280 AJ438952	21275	+	TSC_hg19_v1_chr20_+_30946787 AK122923	21931	+	AB023195 TSC_hg19_v1_chr20_+_31017235	92316	+	NM_004798|KIF3B|9371|kinesin family member 3B##AB002357|KIF3B|9371|kinesin family member 3B##AL832023|POFUT1|23509|protein O-fucosyltransferase 1##D80002|POFUT1|23509|protein O-fucosyltransferase 1##NM_001164603|ASXL1|171023|additional sex combs like 1 (Drosophila)##NM_015338|ASXL1|171023|additional sex combs like 1 (Drosophila)##BC100280|ASXL1|171023|additional sex combs like 1 (Drosophila)##BC064984|ASXL1|171023|additional sex combs like 1 (Drosophila)##BC137278|ASXL1|171023|additional sex combs like 1 (Drosophila)##BC137280|ASXL1|171023|additional sex combs like 1 (Drosophila)##AJ438952|ASXL1|171023|additional sex combs like 1 (Drosophila)##AK122923|ASXL1|171023|additional sex combs like 1 (Drosophila)##AB023195|ASXL1|171023|additional sex combs like 1 (Drosophila)	0.575639	CTCF.p2:1:0.576
chr6	11655972	11656089	reg1004507.p1	12.316	+	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-117532	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-273490	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-423120	-	NM_001143948 NM_032744	123249	-	NM_002114	356693	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	634563	+	NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.99997	CTCF.p2:-41:1.000
chr7	12663643	12663762	reg1005998.p1	12.316	+	AK027778 NM_033128	-34555	+	AB067492 NM_001112706 AK290363 AK075123 TSC_hg19_v1_chr7_+_12610346 BC021090 AB590413 DQ892033 DQ895224 AF276507	-53395	+	NM_001135924	-219851	-	TSC_hg19_v1_chr7_+_12726499 NM_001037164 NM_212460 BC039123 BC001111 BC003027	62784	+	NM_001195396 NM_005738	63208	+	TSC_hg19_v1_chr7_+_12727257 AK313233 U73960	63544	+	AK027778|SCIN|85477|scinderin##NM_033128|SCIN|85477|scinderin##AB067492|SCIN|85477|scinderin##NM_001112706|SCIN|85477|scinderin##AK290363|SCIN|85477|scinderin##AK075123|SCIN|85477|scinderin##BC021090|SCIN|85477|scinderin##DQ892033|SCIN|85477|scinderin##DQ895224|SCIN|85477|scinderin##AF276507|SCIN|85477|scinderin##NM_001135924|VWDE|221806|von Willebrand factor D and EGF domains##NM_001037164|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_212460|ARL4A|10124|ADP-ribosylation factor-like 4A##BC039123|ARL4A|10124|ADP-ribosylation factor-like 4A##BC001111|ARL4A|10124|ADP-ribosylation factor-like 4A##BC003027|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_001195396|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_005738|ARL4A|10124|ADP-ribosylation factor-like 4A##AK313233|ARL4A|10124|ADP-ribosylation factor-like 4A##U73960|ARL4A|10124|ADP-ribosylation factor-like 4A	0.042678	
chr11	111101230	111101369	reg1005524.p2	12.315	+	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	-518014	-	TSC_hg19_v1_chr11_-_110582887 AB037812	-518374	-	AY496266 TSC_hg19_v1_chr11_-_110582834	-518496	-	BC039669 NM_198498	25407	+	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	68734	+	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	148653	-	AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20##AB037812|ARHGAP20|57569|Rho GTPase activating protein 20##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20##BC039669|C11orf53|341032|chromosome 11 open reading frame 53##NM_198498|C11orf53|341032|chromosome 11 open reading frame 53##AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1	0.711377	CTCF.p2:1:0.711
chr8	144461943	144462067	reg1007948.p1	12.315	+	TSC_hg19_v1_chr8_+_144451016 NM_052924 BC012135 BC025767 AB528055 AY082588 CU693058 AB067516	-10915	+	AF349017 NM_052963 TSC_hg19_v1_chr8_-_144417051	-44950	-	TSC_hg19_v1_chr8_-_144417034 AK303237 AK315913 AK308475 AK311647 BC071914 BC044646 BC052285	-44990	-	NM_201589	50596	-	D63484 TSC_hg19_v1_chr8_-_144623602 BC038670	161586	-	TSC_hg19_v1_chr8_-_144623640 NM_015117	161627	-	NM_052924|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC012135|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC025767|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AY082588|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AB067516|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AF349017|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_052963|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK303237|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK315913|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK308475|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK311647|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC071914|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC044646|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC052285|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_201589|MAFA|389692|v-maf musculoaponeurotic fibrosarcoma oncogene homolog A (avian)##D63484|ZC3H3|23144|zinc finger CCCH-type containing 3##BC038670|ZC3H3|23144|zinc finger CCCH-type containing 3##NM_015117|ZC3H3|23144|zinc finger CCCH-type containing 3	0.986975	CTCF.p2:-7:0.987
chr9	81054518	81054635	reg1006584.p1	12.315	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	-142518	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	-203546	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-408392	-	TSC_hg19_v1_chr9_+_82186879 NM_007005	1132310	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	1132948	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	1133109	+	AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.999342	CTCF.p2:-9:0.999
chr5	169611188	169611312	reg1007738.p1	12.314	+	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	-78279	+	AK055998 NM_001129891	-203507	-	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-546950	+	BC030767 NM_001102609 BC092511	48746	+	BT007273 FN432830 DQ890681 DQ893863 AB527802 TSC_hg19_v1_chr5_-_169724688	113401	-	TSC_hg19_v1_chr5_-_169724734 BC016618 AK310369	113505	-	AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58##BT007273|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##FN432830|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ890681|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ893863|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	0.998457	CTCF.p2:4:0.998
chr1	113585365	113585478	reg1005708.p2	12.313	+	TSC_hg19_v1_chr1_+_113499054 BC023568 BC047723 BC062295 BX648855	-86388	+	TSC_hg19_v1_chr1_-_113498861 AK303603 AJ438943 NM_003051	-86520	-	BC045664 AK094064 NM_001166496 AF239919 AL162079 TSC_hg19_v1_chr1_-_113498818 AK296688 AK312500 BC026317	-86704	-	TSC_hg19_v1_chr1_+_113615809 AK291031 CR936669 AB018349 NM_014813 AL161998	30394	+	TSC_hg19_v1_chr1_+_113615865 BC117368 BC117370 AB527394	30525	+	BC130409 BC144144 NM_001142782 NM_152900	348053	+	BC062295|LOC100506392|100506392|uncharacterized LOC100506392##BX648855|LOC100506392|100506392|uncharacterized LOC100506392##AK303603|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AJ438943|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_003051|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC045664|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK094064|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_001166496|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AF239919|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AL162079|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK296688|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK312500|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC026317|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK291031|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##CR936669|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AB018349|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##NM_014813|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AL161998|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC117368|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC117370|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC130409|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##BC144144|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_001142782|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_152900|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3	0.481384	CTCF.p2:16:0.481
chr8	133157261	133157389	reg1008008.p1	12.313	+	NM_001145095	-39814	-	AK297911 NM_001080399	-85699	-	BX648595 TSC_hg19_v1_chr8_+_132991247	-166116	+	AK296293 NM_001204824	302183	-	AB208890 AF033347 TSC_hg19_v1_chr8_-_133492689	335298	-	TSC_hg19_v1_chr8_-_133492751 AB527350 BC128576	335462	-	NM_001145095|HHLA1|10086|HERV-H LTR-associating 1##AK297911|OC90|729330|otoconin 90##NM_001080399|OC90|729330|otoconin 90##BX648595|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##AK296293|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##NM_001204824|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3	0.98863	CTCF.p2:11:0.989
chr12	96883227	96883355	reg1007604.p1	12.312	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-88974	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	-89308	-	TSC_hg19_v1_chr12_+_96588254 BC017371	-295024	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	417740	+	BC027605 NM_001135175	417952	+	TSC_hg19_v1_chr12_-_98897622 AK126817	2014336	-	AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK126817|LOC643770|643770|uncharacterized LOC643770	0.518051	CTCF.p2:-9:0.478
chr14	106765176	106765316	reg1001792.p1	12.312	+	AY393053 S85238 TSC_hg19_v1_chr14_-_106746153	-19141	-	AM279487 AF308557 Y17783 Y17784 HM774660 JN111012 AF103142 AY515002 HQ704054 JN110499 JN110977 JN111085 HM774129 HM774274 HM774585 HM774849 HQ704055 U21254 Y17140 AY050689 AY050700 AY392847 AY392855 AY393130 AY393134 AY393349 AY393375 AY393380 AY393622 AY393638 AY393642 AY393655 AY393684 AY393690 AY866668 DQ100948 AY393127 AF533986 AY866766 DQ926392 GU570247 AY866814 DQ100974 DQ926235 DQ926301 FJ039787 JN158459 AY944709 DQ535390 BC090939 AF062249 AF062286 AJ224083 GU179345 BC089421 BC066642 TSC_hg19_v1_chr14_-_106733637	-31730	-	L14821 U19885 U42468 X56526 DQ001068 L28052 AF283793 AF283795 AF283796 AF283798 AF283799 AF283805 AJ519221 AJ519266 AJ519267 AJ519271 AJ519324 AJ519325 AJ519330 AJ519337 L26907 L33035 L08083 AF431049 X67909 L08090 AF062136 AF062184 AF062205 AF062260 AF062270 AF062276 AF062280 AF174012 AF174019 AF174024 AF174029 AJ131062 AY172959 L01276 L11699 L23931 L38433 M26994 M26995 M62731 M99595 S72729 U43754 X17677 X65895 X65900 X81726 X81731 X81732 X81748 X81755 Z11946 Z47213 Z47214 Z47217 Z47226 Z47232 CU677431 L08088 Z14202 M18513 X14584 AK128301 Z14205 Z14201 Z14200 BC069020 M34024 BC015760 M29470 BC078671 TSC_hg19_v1_chr14_-_106725734 AK130476 AK092803 AK097010 AK097950 AK098817 AK128533 AK129776 AK301393 AX747738 BX640947 M97920	-39568	-	AJ305231 DQ118259 HM774835 DQ926094 AY866678 EU794438 Z80845 BC087841 TSC_hg19_v1_chr14_-_106774560	9189	-	U32154 AF460767 DQ524080 DQ454738 Y08403 HM774396 AF103161 AJ245070 AY866645 AM233757 AY670731 DQ005273 AB063909 AB363132 AJ556745 AY670715 AY670719 AY670726 AY670727 AY670745 AY670770 AY670773 AY670784 AY670819 AY670831 AY670837 AY670857 AY671081 AY671102 AY671324 AY671379 AY671400 AY671500 AY671586 AY671639 AY671641 AY671703 AY671775 AY671785 AY781815 AY781827 AY866636 DQ065711 DQ926028 DQ926188 DQ926206 FJ492934 AJ430733 EF178114 FJ385294 HM152518 AY392953 L28053 AY671012 AY671034 AY671045 AY671152 AY671174 AY671714 AY671721 L03677 Z75396 Z75404 L23570 BC073765 AK130813 AK301332 AK130585 AK128579 AK128568 AK129620 TSC_hg19_v1_chr14_-_106781004	15524	-	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 AF044420 AF044422 AF044425 AF044427 AF044442 AF090355 AF099201 AF174074 AF471431 AJ132850 AJ271549 AJ300787 AJ300793 AJ300798 AJ300803 AJ308463 AJ633622 AJ633623 AY028777 AY033265 AY033266 AY033267 AY530317 AY554176 AY640472 AY640475 AY640477 AY640483 AY640501 AY640511 AY640535 AY640539 AY640541 AY640544 AY640549 AY640550 AY640557 AY640558 AY640561 AY640568 AY640569 AY640573 AY640577 AY685306 AY781859 AY846266 AY846267 AY866744 AY941844 AY941856 AY941857 AY941860 AY941863 AY941865 AY941866 AY941868 AY941892 AY941896 AY941898 AY941901 AY941907 AY941913 AY941935 AY941942 AY941950 AY941953 AY941968 AY941970 AY941982 AY941983 AY941985 AY941986 AY941988 AY941989 AY944708 AY944716 AY971015 AY971027 AY971037 AY971078 AY971081 AY971115 AY971120 AY971130 AY971135 DQ065629 DQ065669 DQ065674 DQ065689 DQ065692 DQ065718 DQ065725 DQ431499 DQ431621 DQ431627 DQ840705 DQ840715 DQ840744 DQ926087 DQ926091 DQ926150 DQ926207 DQ926222 DQ926372 DQ926388 DQ926512 DQ926569 DQ926578 DQ926634 EF177978 EF178004 EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 AY866854 AY882579 AY927661 AY941847 AY941848 AY941861 AY941864 AY941867 AY941869 AY941871 AY941872 AY941874 AY941875 AY941893 AY941894 AY941895 AY941897 AY941904 AY941908 AY941922 AY941932 AY941933 AY941934 AY941944 AY941946 AY941951 AY941954 AY941956 AY941963 AY941964 AY941966 AY941967 AY941969 AY944690 AY971127 D83678 D83681 D83684 D83685 D83694 DQ005284 DQ065696 DQ100659 DQ100685 DQ100775 DQ100819 DQ100846 DQ100857 DQ100907 DQ100930 DQ212508 DQ212509 DQ431475 DQ431476 DQ431501 DQ431573 DQ431575 DQ431576 DQ431580 DQ431582 DQ431606 DQ431607 DQ431622 DQ431628 DQ431633 DQ431634 DQ431637 DQ431642 DQ431643 DQ431646 DQ431653 DQ431658 DQ535263 DQ535266 DQ535268 DQ535293 DQ535308 DQ535373 DQ535382 DQ535397 DQ535424 DQ535426 DQ535429 DQ535437 DQ535439 DQ535440 DQ535461 DQ535466 DQ840703 DQ840706 DQ840712 DQ840713 DQ840745 DQ840782 DQ840813 DQ923052 DQ926032 DQ926064 DQ926133 DQ926340 DQ926374 DQ926384 DQ926552 EF177969 EF177975 EF177991 EF178015 EF178075 EF178091 EF178098 EF178099 EF221755 EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	26048	-	BC090939|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089421|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC066642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AY172959|IGHV4-31|28396|immunoglobulin heavy variable 4-31##X14584|IGHV3-23|28442|immunoglobulin heavy variable 3-23##AK128301|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC069020|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC015760|IGHM|3507|immunoglobulin heavy constant mu##BC078671|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092803|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097010|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097950|IGHM|3507|immunoglobulin heavy constant mu##AK098817|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129776|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640947|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC087841|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073765|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK130813|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130585|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128568|IGHD|3495|immunoglobulin heavy constant delta##AK129620|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	3.544905	CTCF.p2:-6:0.992	CTCF.p2:33:0.882	CTCF.p2:-63:0.985	CTCF.p2:-83:0.557
chr3	3242452	3242581	reg1007373.p1	12.312	+	TSC_hg19_v1_chr3_-_3221401 NM_001173482 NM_016302	-21115	-	TSC_hg19_v1_chr3_-_3221386 AK301423	-21130	-	TSC_hg19_v1_chr3_-_3221376 AF117230 CU675978 CU688352 AK058191 BC059171 CR627060 AK027507 AK312577 BC017419 BC067811	-21144	-	TSC_hg19_v1_chr3_+_3841114 NM_020873	598583	+	AK307537 NM_001243723 NM_006515 TSC_hg19_v1_chr3_+_4345015	1102492	+	TSC_hg19_v1_chr3_+_4345048 AK222734 AK297865 AK302296 AB590082 AF054989 BC011635 BC008931 U80776 AY952295 CU679994	1102547	+	NM_001173482|CRBN|51185|cereblon##NM_016302|CRBN|51185|cereblon##AK301423|CRBN|51185|cereblon##AF117230|CRBN|51185|cereblon##AK058191|CRBN|51185|cereblon##BC059171|CRBN|51185|cereblon##CR627060|CRBN|51185|cereblon##AK027507|CRBN|51185|cereblon##AK312577|CRBN|51185|cereblon##BC017419|CRBN|51185|cereblon##BC067811|CRBN|51185|cereblon##NM_020873|LRRN1|57633|leucine rich repeat neuronal 1##AK307537|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_001243723|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_006515|SETMAR|6419|SET domain and mariner transposase fusion gene##AK222734|SETMAR|6419|SET domain and mariner transposase fusion gene##AK297865|SETMAR|6419|SET domain and mariner transposase fusion gene##AK302296|SETMAR|6419|SET domain and mariner transposase fusion gene##AF054989|SETMAR|6419|SET domain and mariner transposase fusion gene##BC011635|SETMAR|6419|SET domain and mariner transposase fusion gene##BC008931|SETMAR|6419|SET domain and mariner transposase fusion gene##U80776|SETMAR|6419|SET domain and mariner transposase fusion gene##AY952295|SETMAR|6419|SET domain and mariner transposase fusion gene	0.992523	CTCF.p2:-11:0.993
chr5	123006784	123006909	reg1005070.p1	12.312	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-158964	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-247702	-	NM_001136239 AK297992 AF272898 AF272899	-582002	+	BC131507 AB033107 BC151226 NM_020747	1073942	-	NM_001146319 AK316288 AK300154	2688968	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	2751997	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.99212	CTCF.p2:8:0.992
chr9	2728188	2728325	reg1005686.p2	12.312	+	BC101352 BC101353 NM_133497	-10731	+	AK092381 AX747508 TSC_hg19_v1_chr9_+_2622134 AB590563 D16494	-106095	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	-106144	+	TSC_hg19_v1_chr9_-_2844074 AK292169 BC020598	115816	-	TSC_hg19_v1_chr9_-_2844084 AL832245 AK225953 AL832239	115833	-	TSC_hg19_v1_chr9_-_2844102 AK315531 NM_014878	115857	-	BC101352|KCNV2|169522|potassium channel, subfamily V, member 2##BC101353|KCNV2|169522|potassium channel, subfamily V, member 2##NM_133497|KCNV2|169522|potassium channel, subfamily V, member 2##AK092381|VLDLR|7436|very low density lipoprotein receptor##D16494|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor##AK292169|KIAA0020|9933|KIAA0020##AL832245|KIAA0020|9933|KIAA0020##AK225953|KIAA0020|9933|KIAA0020##AL832239|KIAA0020|9933|KIAA0020##AK315531|KIAA0020|9933|KIAA0020##NM_014878|KIAA0020|9933|KIAA0020	0.945588	CTCF.p2:7:0.946
chr9	99619230	99619368	reg1007225.p1	12.312	+	BC137073 AK131468 NM_001001662	-2913	-	AB023189 NM_014930 TSC_hg19_v1_chr9_-_99540352 BC036676 BC068587 BC058022 AK292600	-78946	-	TSC_hg19_v1_chr9_-_99417600 BC136501 BC136503 NM_153698	-201689	-	NM_001045477 NM_001170741	71986	+	TSC_hg19_v1_chr9_-_99775872 BC005058	156601	-	AF070448 BC023504 Y14734 AB001928 AK310645 AK310740 BC110512 AY358641 NM_001333	182179	-	BC137073|ZNF782|158431|zinc finger protein 782##AK131468|ZNF782|158431|zinc finger protein 782##NM_001001662|ZNF782|158431|zinc finger protein 782##AB023189|ZNF510|22869|zinc finger protein 510##NM_014930|ZNF510|22869|zinc finger protein 510##BC036676|ZNF510|22869|zinc finger protein 510##BC068587|ZNF510|22869|zinc finger protein 510##BC058022|ZNF510|22869|zinc finger protein 510##AK292600|ZNF510|22869|zinc finger protein 510##BC136501|C9orf21|195827|chromosome 9 open reading frame 21##BC136503|C9orf21|195827|chromosome 9 open reading frame 21##NM_153698|C9orf21|195827|chromosome 9 open reading frame 21##NM_001045477|FAM22G|441457|family with sequence similarity 22, member G##NM_001170741|FAM22G|441457|family with sequence similarity 22, member G##BC005058|HIATL2|84278|hippocampus abundant transcript-like 2##AF070448|CTSL2|1515|cathepsin L2##BC023504|CTSL2|1515|cathepsin L2##Y14734|CTSL2|1515|cathepsin L2##AB001928|CTSL2|1515|cathepsin L2##AK310645|CTSL2|1515|cathepsin L2##AK310740|CTSL2|1515|cathepsin L2##BC110512|CTSL2|1515|cathepsin L2##AY358641|CTSL2|1515|cathepsin L2##NM_001333|CTSL2|1515|cathepsin L2	0.349294	CTCF.p2:-16:0.349
chr6	152659800	152659917	reg1007122.p1	12.310	+	TSC_hg19_v1_chr6_-_152623240 AK310977	-36607	-	X03635 AK304833 M69297 AF258449 AF258450 AF258451 NM_000125 TSC_hg19_v1_chr6_+_152128813 BC128573 BC128574 EU930361 AB587448 AB307713 AY750962 JF810888 U47678	-530992	+	NM_001122740 U68067	-531405	+	TSC_hg19_v1_chr6_-_152702331 BX537517	42483	-	AK056122 TSC_hg19_v1_chr6_-_152702456 BC039121	42616	-	AF535142 NM_033071 TSC_hg19_v1_chr6_-_152958011	298184	-	AK310977|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##X03635|ESR1|2099|estrogen receptor 1##AK304833|ESR1|2099|estrogen receptor 1##M69297|ESR1|2099|estrogen receptor 1##AF258449|ESR1|2099|estrogen receptor 1##AF258450|ESR1|2099|estrogen receptor 1##AF258451|ESR1|2099|estrogen receptor 1##NM_000125|ESR1|2099|estrogen receptor 1##BC128573|ESR1|2099|estrogen receptor 1##BC128574|ESR1|2099|estrogen receptor 1##AB307713|ESR1|2099|estrogen receptor 1##AY750962|ESR1|2099|estrogen receptor 1##JF810888|ESR1|2099|estrogen receptor 1##U47678|ESR1|2099|estrogen receptor 1##NM_001122740|ESR1|2099|estrogen receptor 1##U68067|ESR1|2099|estrogen receptor 1##BX537517|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AK056122|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##BC039121|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	0.0	
chr1	161708624	161708774	reg1005428.p1	12.309	+	AY670683 AY670684 AY670685 AY670686 AY670687 NM_001002901 AY786314	-16244	+	AF531423 NM_001184866 NM_001184867 NM_001184870 NM_001184871 NM_001184872 NM_001184873 NM_032738	-31938	+	NM_001002273 NM_001002274 NM_001002275 NM_001190828 NM_004001 AF543826 M31933 X17653 AK308150 AB209585 BC062629 X52473 X62573 BC146678 M28696 M31934 BC031992 BC141826 U90941 AB590317 BC148273 CR407635 CU689254 DQ891344 DQ894525 U87560 U87561 U87562 U87563 U87564 U87565 U87566 U87567 U87568 U87569 U87570 U87571 U87572 U87573 U87574 U87575 U87576 U87577 M31935	-75707	+	TSC_hg19_v1_chr1_+_161719575 BC006286 AF119226 NM_007240 DQ892766 DQ896011 CU675333 BT006633	10867	+	NM_007348 TSC_hg19_v1_chr1_+_161736080 AB015856	27371	+	AF005887 AK290498 TSC_hg19_v1_chr1_+_161736109	27411	+	AY670683|FCRLB|127943|Fc receptor-like B##AY670684|FCRLB|127943|Fc receptor-like B##AY670685|FCRLB|127943|Fc receptor-like B##AY670686|FCRLB|127943|Fc receptor-like B##AY670687|FCRLB|127943|Fc receptor-like B##NM_001002901|FCRLB|127943|Fc receptor-like B##AY786314|FCRLB|127943|Fc receptor-like B##AF531423|FCRLA|84824|Fc receptor-like A##NM_001184866|FCRLA|84824|Fc receptor-like A##NM_001184867|FCRLA|84824|Fc receptor-like A##NM_001184870|FCRLA|84824|Fc receptor-like A##NM_001184871|FCRLA|84824|Fc receptor-like A##NM_001184872|FCRLA|84824|Fc receptor-like A##NM_001184873|FCRLA|84824|Fc receptor-like A##NM_032738|FCRLA|84824|Fc receptor-like A##NM_001002273|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_001002274|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_001002275|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_001190828|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_004001|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AF543826|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M31933|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##X17653|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AK308150|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AB209585|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##X52473|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##X62573|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC146678|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M28696|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M31934|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC031992|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC141826|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U90941|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC148273|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##CR407635|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##DQ891344|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##DQ894525|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87560|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87561|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87562|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87563|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87564|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87565|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87566|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87567|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87568|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87569|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87570|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87571|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87572|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87573|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87574|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87575|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87576|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87577|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M31935|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC006286|DUSP12|11266|dual specificity phosphatase 12##AF119226|DUSP12|11266|dual specificity phosphatase 12##NM_007240|DUSP12|11266|dual specificity phosphatase 12##DQ892766|DUSP12|11266|dual specificity phosphatase 12##DQ896011|DUSP12|11266|dual specificity phosphatase 12##BT006633|DUSP12|11266|dual specificity phosphatase 12##NM_007348|ATF6|22926|activating transcription factor 6##AB015856|ATF6|22926|activating transcription factor 6##AF005887|ATF6|22926|activating transcription factor 6##AK290498|ATF6|22926|activating transcription factor 6	0.956963	CTCF.p2:21:0.957
chr13	21871265	21871398	reg1007864.p1	12.308	+	TSC_hg19_v1_chr13_+_21750834 BC068492 BC023616 BC000002	-120531	+	CU690596 TSC_hg19_v1_chr13_-_21750699 AF361358 AK090584 AK314864 AX746521 BC013418 AK307976 BC048988 NM_001166017 NM_145061	-120643	-	NM_024026	-120960	+	TSC_hg19_v1_chr13_+_21872311 AK093279	952	+	CU686599 TSC_hg19_v1_chr13_-_22033417 BC110517 AK295804 BC050367 AK299354	162059	-	TSC_hg19_v1_chr13_-_22033486 AX721051	162151	-	BC068492|MRP63|78988|mitochondrial ribosomal protein 63##BC023616|MRP63|78988|mitochondrial ribosomal protein 63##BC000002|MRP63|78988|mitochondrial ribosomal protein 63##AF361358|SKA3|221150|spindle and kinetochore associated complex subunit 3##AK090584|SKA3|221150|spindle and kinetochore associated complex subunit 3##AK314864|SKA3|221150|spindle and kinetochore associated complex subunit 3##BC013418|SKA3|221150|spindle and kinetochore associated complex subunit 3##AK307976|SKA3|221150|spindle and kinetochore associated complex subunit 3##BC048988|SKA3|221150|spindle and kinetochore associated complex subunit 3##NM_001166017|SKA3|221150|spindle and kinetochore associated complex subunit 3##NM_145061|SKA3|221150|spindle and kinetochore associated complex subunit 3##NM_024026|MRP63|78988|mitochondrial ribosomal protein 63##AK093279|MIPEPP3|650794|mitochondrial intermediate peptidase pseudogene 3##BC110517|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK295804|ZDHHC20|253832|zinc finger, DHHC-type containing 20##BC050367|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK299354|ZDHHC20|253832|zinc finger, DHHC-type containing 20	0.834695	CTCF.p2:-12:0.261	CTCF.p2:20:0.467
chr7	128523743	128523907	reg1005982.p1	12.308	+	NM_001195150	-17362	+	TSC_hg19_v1_chr7_+_128502927 CR456896	-20883	+	NM_001198909 NM_004231 BC107854 TSC_hg19_v1_chr7_+_128502909 BC104230 BC104231 D49400 AK312214	-20935	+	TSC_hg19_v1_chr7_-_128543406 AK095464	19576	-	TSC_hg19_v1_chr7_-_128550763 AK122706 NM_001135914 NM_199349	26941	-	AK293654 AY693665 AY693668 NM_001098629 NM_001098630 NM_001242452 DQ995492 U51127 AK297083 AY504947 AY693666 AY693667 EU258896	54211	+	NM_001195150|LOC100130705|100130705|uncharacterized LOC100130705##CR456896|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##NM_001198909|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##NM_004231|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC107854|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC104230|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC104231|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##D49400|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##AK312214|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##AK095464|KCP|375616|kielin/chordin-like protein##AK122706|KCP|375616|kielin/chordin-like protein##NM_001135914|KCP|375616|kielin/chordin-like protein##NM_199349|KCP|375616|kielin/chordin-like protein##AK293654|IRF5|3663|interferon regulatory factor 5##AY693665|IRF5|3663|interferon regulatory factor 5##AY693668|IRF5|3663|interferon regulatory factor 5##NM_001098629|IRF5|3663|interferon regulatory factor 5##NM_001098630|IRF5|3663|interferon regulatory factor 5##NM_001242452|IRF5|3663|interferon regulatory factor 5##DQ995492|IRF5|3663|interferon regulatory factor 5##U51127|IRF5|3663|interferon regulatory factor 5##AK297083|IRF5|3663|interferon regulatory factor 5##AY504947|IRF5|3663|interferon regulatory factor 5##AY693666|IRF5|3663|interferon regulatory factor 5##AY693667|IRF5|3663|interferon regulatory factor 5##EU258896|IRF5|3663|interferon regulatory factor 5	0.999888	CTCF.p2:2:1.000
chr8	61309515	61309640	reg1007627.p1	12.308	+	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	-115656	-	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	-1277905	-	NM_003580 TSC_hg19_v1_chr8_-_59572413	-1737166	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	119863	+	AK297576 TSC_hg19_v1_chr8_+_61429494	119917	+	TSC_hg19_v1_chr8_+_61429545 AK312344	119969	+	BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family##AK297576|RAB2A|5862|RAB2A, member RAS oncogene family##AK312344|RAB2A|5862|RAB2A, member RAS oncogene family	0.540003	CTCF.p2:22:0.540
chr1	165894055	165894166	reg1006193.p1	12.307	+	AF236637 AK294537 TSC_hg19_v1_chr1_+_165797063 AB062451	-97024	+	TSC_hg19_v1_chr1_+_165796794 NM_012474 BC002906	-97339	+	AK124964 BC009228 TSC_hg19_v1_chr1_+_165738255 BC071770	-155889	+	TSC_hg19_v1_chr1_-_166135951 NM_001017961	241844	-	TSC_hg19_v1_chr1_-_166135982 AB593134	241875	-	TSC_hg19_v1_chr1_-_166136076 BC114214	242030	-	AF236637|UCK2|7371|uridine-cytidine kinase 2##AK294537|UCK2|7371|uridine-cytidine kinase 2##AB062451|UCK2|7371|uridine-cytidine kinase 2##NM_012474|UCK2|7371|uridine-cytidine kinase 2##BC002906|UCK2|7371|uridine-cytidine kinase 2##AK124964|LOC100147773|100147773|uncharacterized LOC100147773##BC009228|LOC100147773|100147773|uncharacterized LOC100147773##BC071770|LOC100147773|100147773|uncharacterized LOC100147773##NM_001017961|FAM78B|149297|family with sequence similarity 78, member B##BC114214|FAM78B|149297|family with sequence similarity 78, member B	0.955856	CTCF.p2:0:0.956
chr19	40372284	40372417	reg1008521.p1	12.304	+	AK296950 TSC_hg19_v1_chr19_-_40337020 NM_001436	-35315	-	TSC_hg19_v1_chr19_-_40337007 BC019260 AK308649	-35344	-	AB463635 M59849 TSC_hg19_v1_chr19_-_40336992	-35382	-	D84239 NM_003890	68182	-	TSC_hg19_v1_chr19_+_40477090 AF020736 AK313183 NM_006503 NM_153001 BC010396 AK310135 AF038965 BC000343 BC014488 BC018811 U27515 AK290285 DQ891875 DQ894876 BT007232 CU679695	104720	+	NM_178544 AK122968 AK292528 BC045649	130635	+	AK296950|FBL|2091|fibrillarin##NM_001436|FBL|2091|fibrillarin##BC019260|FBL|2091|fibrillarin##AK308649|FBL|2091|fibrillarin##M59849|FBL|2091|fibrillarin##D84239|FCGBP|8857|Fc fragment of IgG binding protein##NM_003890|FCGBP|8857|Fc fragment of IgG binding protein##AF020736|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK313183|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_006503|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_153001|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC010396|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK310135|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AF038965|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC000343|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC014488|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC018811|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##U27515|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK290285|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##DQ891875|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##DQ894876|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BT007232|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_178544|ZNF546|339327|zinc finger protein 546##AK122968|ZNF546|339327|zinc finger protein 546##AK292528|ZNF546|339327|zinc finger protein 546##BC045649|ZNF546|339327|zinc finger protein 546	0.802232	CTCF.p2:-9:0.802
chr2	87445006	87445151	reg1007618.p1	12.304	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	-141746	-	BC107767 BC109248 BC070296 BC005379 NM_001032392 M93143 NM_002665 BC022294	-196120	-	CR749330 NM_001024457	-300341	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	309939	+	TSC_hg19_v1_chr2_+_87755060 AK312010	309982	+	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	602541	+	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC107767|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC022294|PLGLB2|5342|plasminogen-like B2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1	0.979184	CTCF.p2:11:0.979
chr5	81521511	81521633	reg1005696.p2	12.304	+	TSC_hg19_v1_chr5_+_81268100 AL136912	-253474	+	AF318326 TSC_hg19_v1_chr5_+_81267992	-253582	+	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	-253727	+	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	52599	-	TSC_hg19_v1_chr5_-_81574219 NM_001025	52647	-	BC093982 BC112191 NM_001017971	79593	+	AL136912|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AF318326|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##NM_001025|RPS23|6228|ribosomal protein S23##BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like	0.112175	
chr7	112538879	112538991	reg1005242.p2	12.304	+	AK293311 TSC_hg19_v1_chr7_-_112430447 AK314460 AL136626 AK025482 NM_022484	-108492	-	NM_001134468 BC031976 AK096894 NM_182597	-417949	+	NM_001197079	-446823	+	AL834437 AK299901 TSC_hg19_v1_chr7_-_112579931 BC114615 AK056380 NM_152556	40895	-	AK297464 AK312587 NM_001146266 AL161959 NM_001146267 TSC_hg19_v1_chr7_-_112726667	187560	-	BC030577 TSC_hg19_v1_chr7_-_112727780	188845	-	AK293311|TMEM168|64418|transmembrane protein 168##AK314460|TMEM168|64418|transmembrane protein 168##AL136626|TMEM168|64418|transmembrane protein 168##AK025482|TMEM168|64418|transmembrane protein 168##NM_022484|TMEM168|64418|transmembrane protein 168##NM_001134468|C7orf53|286006|chromosome 7 open reading frame 53##BC031976|C7orf53|286006|chromosome 7 open reading frame 53##AK096894|C7orf53|286006|chromosome 7 open reading frame 53##NM_182597|C7orf53|286006|chromosome 7 open reading frame 53##NM_001197079|IFRD1|3475|interferon-related developmental regulator 1##AL834437|C7orf60|154743|chromosome 7 open reading frame 60##AK299901|C7orf60|154743|chromosome 7 open reading frame 60##BC114615|C7orf60|154743|chromosome 7 open reading frame 60##AK056380|C7orf60|154743|chromosome 7 open reading frame 60##NM_152556|C7orf60|154743|chromosome 7 open reading frame 60##AK297464|GPR85|54329|G protein-coupled receptor 85##AK312587|GPR85|54329|G protein-coupled receptor 85##NM_001146266|GPR85|54329|G protein-coupled receptor 85##AL161959|GPR85|54329|G protein-coupled receptor 85##NM_001146267|GPR85|54329|G protein-coupled receptor 85##BC030577|GPR85|54329|G protein-coupled receptor 85	0.878738	CTCF.p2:4:0.879
chr6	148899430	148899546	reg1005484.p1	12.303	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-235297	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-235498	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	-235725	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	168721	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	739615	+	AK315038 NM_015093 AK307650	739953	+	AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##NM_005715|UST|10090|uronyl-2-sulfotransferase##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2	0.0	
chr14	55679914	55680032	reg1006828.p1	12.300	+	TSC_hg19_v1_chr14_-_55658298 BX248255 D13633 AK291847 AK299338 BC010658 AK297480 AB076695 NM_001146015 NM_014750	-21673	-	TSC_hg19_v1_chr14_-_55650349 BT007344	-29567	-	TSC_hg19_v1_chr14_+_55595969 AB006780 BC053667 BC068068 M36682 BC001120 M35368 M57710	-83988	+	NM_017943 AK092879 AX747787 TSC_hg19_v1_chr14_+_55738097 BC109120 BC109121	58086	+	TSC_hg19_v1_chr14_+_55738114 BX248268 BC095482	58185	+	NM_152231	58898	+	BX248255|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##D13633|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK291847|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK299338|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##BC010658|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK297480|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AB076695|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_001146015|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_014750|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AB006780|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC053667|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC068068|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M36682|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC001120|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M35368|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M57710|LGALS3|3958|lectin, galactoside-binding, soluble, 3##NM_017943|FBXO34|55030|F-box protein 34##AK092879|FBXO34|55030|F-box protein 34##BC109120|FBXO34|55030|F-box protein 34##BC109121|FBXO34|55030|F-box protein 34##BX248268|FBXO34|55030|F-box protein 34##BC095482|FBXO34|55030|F-box protein 34##NM_152231|FBXO34|55030|F-box protein 34	0.051294	
chr8	67521685	67521820	reg1007185.p1	12.298	+	NM_152765	-116262	+	NM_144650 AY033237 AK056992 AK300881 BC047492 BC064634 AK293530 AK300243 AK294114 BC110290	-177020	+	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	-180446	+	BC032233 NM_001080416 NM_001144755 TSC_hg19_v1_chr8_-_67525502	3722	-	AM392649 AM393766 TSC_hg19_v1_chr8_-_67579266	57479	-	TSC_hg19_v1_chr8_-_67579368 BC118917 AL832606	57614	-	NM_152765|C8orf46|254778|chromosome 8 open reading frame 46##NM_144650|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AY033237|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK056992|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300881|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC047492|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC064634|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK293530|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300243|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK294114|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC110290|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC032233|LOC645895|645895|uncharacterized LOC645895##NM_001080416|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1##NM_001144755|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1##AM392649|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##AM393766|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##BC118917|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##AL832606|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1	0.0	
chr18	74398802	74398931	reg1008117.p1	12.296	+	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	-191711	-	BC108287 TSC_hg19_v1_chr18_-_74092260	-306616	-	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-1259244	-	TSC_hg19_v1_chr18_-_74534239 BC032908	135373	-	TSC_hg19_v1_chr18_+_74534512 BX648028	135644	+	AF085243 AF085244 NM_007345	137249	+	D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC108287|ZNF516|9658|zinc finger protein 516##BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##BC032908|LOC100131655|100131655|uncharacterized LOC100131655##BX648028|ZNF236|7776|zinc finger protein 236##AF085243|ZNF236|7776|zinc finger protein 236##AF085244|ZNF236|7776|zinc finger protein 236##NM_007345|ZNF236|7776|zinc finger protein 236	0.926757	CTCF.p2:-5:0.927
chr2	232580037	232580169	reg1005637.p1	12.296	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	-6771	+	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	-6869	+	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	-122486	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	65822	-	TSC_hg19_v1_chr2_+_232646442 AK307486	66334	+	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	71013	+	BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AK307486|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)	0.999752	CTCF.p2:26:1.000
chr4	113249136	113249300	reg1007591.p1	12.296	+	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	-30691	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	-42217	-	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	-96134	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	188114	-	TSC_hg19_v1_chr4_-_113558057 BC044799 BC028584 AK002193	308828	-	NM_016648	308901	+	NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2##BC044799|C4orf21|55345|chromosome 4 open reading frame 21##BC028584|C4orf21|55345|chromosome 4 open reading frame 21##AK002193|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7	0.830482	CTCF.p2:-8:0.830
chr1	160960165	160960287	reg1005953.p1	12.295	+	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	-35667	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	-105268	-	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	-127648	-	BT020103 CR533512 DQ892228 DQ895428 EU831648 EU831732 AB528601 AF207907 AK304412 TSC_hg19_v1_chr1_-_160990931 BC001533 AY358896 AK026665 AF154005 AK075152 AL136649	30672	-	TSC_hg19_v1_chr1_-_160990981 NM_016946	30825	-	AF191495 TSC_hg19_v1_chr1_-_161008713 BC001699 BC038219	48488	-	HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BT020103|F11R|50848|F11 receptor##CR533512|F11R|50848|F11 receptor##DQ892228|F11R|50848|F11 receptor##DQ895428|F11R|50848|F11 receptor##EU831648|F11R|50848|F11 receptor##EU831732|F11R|50848|F11 receptor##AF207907|F11R|50848|F11 receptor##AK304412|F11R|50848|F11 receptor##BC001533|F11R|50848|F11 receptor##AY358896|F11R|50848|F11 receptor##AK026665|F11R|50848|F11 receptor##AF154005|F11R|50848|F11 receptor##AK075152|F11R|50848|F11 receptor##AL136649|F11R|50848|F11 receptor##NM_016946|F11R|50848|F11 receptor##BC001699|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##BC038219|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1	0.991191	CTCF.p2:0:0.991
chr9	38400727	38400862	reg1007204.p1	12.294	+	TSC_hg19_v1_chr9_+_38392760 AK297020 BC001619 AK225950	-8052	+	TSC_hg19_v1_chr9_+_38392698 AK313344	-8097	+	TSC_hg19_v1_chr9_+_38392669 NM_000692	-8121	+	TSC_hg19_v1_chr9_-_38424452 AB463783 NM_001007563	23671	-	AB385522 AB095935 BC152434 NM_147195	219527	-	TSC_hg19_v1_chr9_-_38620602 BC056266	219829	-	AK297020|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##BC001619|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK225950|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK313344|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##NM_001007563|IGFBPL1|347252|insulin-like growth factor binding protein-like 1##AB095935|ANKRD18A|253650|ankyrin repeat domain 18A##BC152434|ANKRD18A|253650|ankyrin repeat domain 18A##NM_147195|ANKRD18A|253650|ankyrin repeat domain 18A##BC056266|ANKRD18A|253650|ankyrin repeat domain 18A	0.996413	CTCF.p2:34:0.996
chr9	9790393	9790501	reg1006056.p2	12.294	+	TSC_hg19_v1_chr9_+_8858136 AK094342	-932314	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-1056528	-	TSC_hg19_v1_chr9_+_8713275 AY779046	-1077155	+	BC028038 NM_002839	822275	-	NM_000550 X51420 BC052608	2902978	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	2984569	+	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##AY779046|RPL18A|6142|ribosomal protein L18a##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150	0.361833	CTCF.p2:5:0.362
chr17	16424686	16424813	reg1007650.p1	12.293	+	NM_001113567 NM_207387 TSC_hg19_v1_chr17_-_16395510	-29242	-	TSC_hg19_v1_chr17_-_16395091 AK093015 AX747857 BC144381	-29596	-	TSC_hg19_v1_chr17_+_16342350 AK098643 AK307982 AK308482 AK309961 BX538291 AK311247 BC027986 BC040159	-82389	+	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	47747	-	AK131401 NM_020787	132412	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	168855	+	NM_001113567|FAM211A|388341|family with sequence similarity 211, member A##NM_207387|FAM211A|388341|family with sequence similarity 211, member A##AK093015|FAM211A|388341|family with sequence similarity 211, member A##BC144381|FAM211A|388341|family with sequence similarity 211, member A##AK098643|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK307982|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK308482|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK309961|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##BX538291|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK311247|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##BC027986|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##BC040159|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A	0.994407	CTCF.p2:14:0.994
chr4	38904470	38904609	reg1007756.p1	12.292	+	TSC_hg19_v1_chr4_+_38869390 NM_138389 AK304050 AK296859 AK292831 BC040452	-35148	+	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	-46111	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	-98120	-	BC030803 BC060512 AK026888 NM_024943	129471	-	TSC_hg19_v1_chr4_+_39046535 NM_001007075 NM_001171654 BC053860 AB208820	141899	+	AK289785 NM_015990 NM_199039	159312	+	NM_138389|FAM114A1|92689|family with sequence similarity 114, member A1##AK304050|FAM114A1|92689|family with sequence similarity 114, member A1##AK296859|FAM114A1|92689|family with sequence similarity 114, member A1##AK292831|FAM114A1|92689|family with sequence similarity 114, member A1##BC040452|FAM114A1|92689|family with sequence similarity 114, member A1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##BC030803|TMEM156|80008|transmembrane protein 156##BC060512|TMEM156|80008|transmembrane protein 156##AK026888|TMEM156|80008|transmembrane protein 156##NM_024943|TMEM156|80008|transmembrane protein 156##NM_001007075|KLHL5|51088|kelch-like 5 (Drosophila)##NM_001171654|KLHL5|51088|kelch-like 5 (Drosophila)##BC053860|KLHL5|51088|kelch-like 5 (Drosophila)##AB208820|KLHL5|51088|kelch-like 5 (Drosophila)##AK289785|KLHL5|51088|kelch-like 5 (Drosophila)##NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)##NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)	0.524256	CTCF.p2:-23:0.524
chr1	151313455	151313579	reg1005449.p1	12.291	+	TSC_hg19_v1_chr1_-_151300176 BC040300 NM_001198774	-13335	-	AK311292 NM_001198773 NM_001198775 NM_002651 TSC_hg19_v1_chr1_-_151300134	-13368	-	TSC_hg19_v1_chr1_-_151299858 BC000029 AK294606	-13667	-	TSC_hg19_v1_chr1_-_151319685 X85786 BC017471	6171	-	TSC_hg19_v1_chr1_-_151319726 AK312289 AK302891 NM_000449 NM_001025603 AK311525	6226	-	AK310044 BC009084 NM_003944 TSC_hg19_v1_chr1_-_151345182 AK303815 AK296661 AK309264 AK315643 AK023875 AK298355 BC032997	31652	-	BC040300|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##NM_001198774|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##AK311292|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##NM_001198773|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##NM_001198775|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##NM_002651|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##BC000029|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##AK294606|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##X85786|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##BC017471|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##AK312289|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##AK302891|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##NM_000449|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##NM_001025603|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##AK311525|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##AK310044|SELENBP1|8991|selenium binding protein 1##BC009084|SELENBP1|8991|selenium binding protein 1##NM_003944|SELENBP1|8991|selenium binding protein 1##AK303815|SELENBP1|8991|selenium binding protein 1##AK296661|SELENBP1|8991|selenium binding protein 1##AK309264|SELENBP1|8991|selenium binding protein 1##AK315643|SELENBP1|8991|selenium binding protein 1##AK023875|SELENBP1|8991|selenium binding protein 1##AK298355|SELENBP1|8991|selenium binding protein 1##BC032997|SELENBP1|8991|selenium binding protein 1	0.999671	CTCF.p2:9:1.000
chr12	103277123	103277249	reg1005837.p1	12.291	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-402804	-	M11568 TSC_hg19_v1_chr12_-_102874344	-402844	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-402864	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	33780	-	TSC_hg19_v1_chr12_-_103311062 BC026251	33877	-	L47726 NM_000277 U49897	34194	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.973659	CTCF.p2:-12:0.974
chr22	42833591	42833728	reg1007428.p1	12.291	+	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	-5278	-	BC038245 TSC_hg19_v1_chr22_-_42765218	-68457	-	AB527391 NM_005650 NM_181492	-222282	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	82108	-	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	82155	-	BC041802 AK294584 AL450314 NM_014509 AK295223 BC119650 BC119651 BC127635 BC127636 CR456455 AL589866 AL590118 AL590120 CU013005 CU013293	116287	+	CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK294584|SERHL2|253190|serine hydrolase-like 2##AL450314|SERHL2|253190|serine hydrolase-like 2##NM_014509|SERHL2|253190|serine hydrolase-like 2##AK295223|SERHL2|253190|serine hydrolase-like 2##BC119650|SERHL2|253190|serine hydrolase-like 2##BC119651|SERHL2|253190|serine hydrolase-like 2##BC127635|SERHL2|253190|serine hydrolase-like 2##BC127636|SERHL2|253190|serine hydrolase-like 2##CR456455|SERHL2|253190|serine hydrolase-like 2##AL589866|SERHL2|253190|serine hydrolase-like 2##AL590118|SERHL2|253190|serine hydrolase-like 2##AL590120|SERHL2|253190|serine hydrolase-like 2##CU013005|SERHL2|253190|serine hydrolase-like 2##CU013293|SERHL2|253190|serine hydrolase-like 2	0.999747	CTCF.p2:7:1.000
chr21	44537441	44537554	reg1006061.p2	12.290	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-9813	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-9872	-	L19501 BC007257 NM_001178008 NM_001178009	-41050	-	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	51677	+	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	308492	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	309498	-	NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##L19501|CBS|875|cystathionine-beta-synthase##BC007257|CBS|875|cystathionine-beta-synthase##NM_001178008|CBS|875|cystathionine-beta-synthase##NM_001178009|CBS|875|cystathionine-beta-synthase##NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1	0.830069	CTCF.p2:5:0.830
chr15	93258142	93258272	reg1006862.p1	12.288	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	-59328	-	AK057393 NM_153040	-243301	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	-321008	+	BC110328 TSC_hg19_v1_chr15_-_93277463	19182	-	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	185279	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	185373	+	BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC110328|FAM174B|400451|family with sequence similarity 174, member B##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2	0.844191	CTCF.p2:21:0.844
chr17	65796648	65796766	reg1005871.p1	12.288	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	-82657	+	BC007905 NM_012417 NM_181671	-422784	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-423119	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	24995	+	AK293224 TSC_hg19_v1_chr17_+_65822221	25510	+	TSC_hg19_v1_chr17_+_65822242 AY282495	25542	+	BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor##AY282495|BPTF|2186|bromodomain PHD finger transcription factor	0.960803	CTCF.p2:-9:0.961
chr19	8341523	8341660	reg1008336.p1	12.288	+	TSC_hg19_v1_chr19_+_8274253 NM_024552 AK222621 AK225394 AK022151 BC063621	-67343	+	AB384635 AB053450 BC153882 NM_032447	-129216	-	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	-223644	+	TSC_hg19_v1_chr19_-_8373195 CR457174 EU831651 BC036814 BC007083 AY358420 AL365455 BC000668 AK222623 AK315656 AL136652 AK058014 AF161254 NM_001165895 NM_016579	31618	-	TSC_hg19_v1_chr19_-_8386260 AF050637 CR456915 CR542266 BC107892 AF054178	44666	-	TSC_hg19_v1_chr19_-_8386300 BC003102 NM_005001	44695	-	NM_024552|CERS4|79603|ceramide synthase 4##AK222621|CERS4|79603|ceramide synthase 4##AK225394|CERS4|79603|ceramide synthase 4##AK022151|CERS4|79603|ceramide synthase 4##BC063621|CERS4|79603|ceramide synthase 4##AB053450|FBN3|84467|fibrillin 3##BC153882|FBN3|84467|fibrillin 3##NM_032447|FBN3|84467|fibrillin 3##BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25##CR457174|CD320|51293|CD320 molecule##EU831651|CD320|51293|CD320 molecule##BC036814|CD320|51293|CD320 molecule##BC007083|CD320|51293|CD320 molecule##AY358420|CD320|51293|CD320 molecule##AL365455|CD320|51293|CD320 molecule##BC000668|CD320|51293|CD320 molecule##AK222623|CD320|51293|CD320 molecule##AK315656|CD320|51293|CD320 molecule##AL136652|CD320|51293|CD320 molecule##AK058014|CD320|51293|CD320 molecule##AF161254|CD320|51293|CD320 molecule##NM_001165895|CD320|51293|CD320 molecule##NM_016579|CD320|51293|CD320 molecule##AF050637|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR456915|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR542266|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##BC107892|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##AF054178|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##BC003102|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##NM_005001|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa	0.0	
chr3	53106773	53106925	reg1007998.p1	12.288	+	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	-26786	-	TSC_hg19_v1_chr3_-_53080023 BC014614 AF168132	-26855	-	TSC_hg19_v1_chr3_-_53079286 NM_001005159	-27540	-	TSC_hg19_v1_chr3_-_53164452 AJ318099 BC043595 NM_052859	57602	-	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	88370	+	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	183162	-	AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1##BC014614|SFMBT1|51460|Scm-like with four mbt domains 1##AF168132|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005159|SFMBT1|51460|Scm-like with four mbt domains 1##AJ318099|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043595|RFT1|91869|RFT1 homolog (S. cerevisiae)##NM_052859|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase	0.998044	CTCF.p2:9:0.998
chr6	138437130	138437267	reg1007775.p1	12.288	+	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	-8630	-	TSC_hg19_v1_chr6_-_138189314 AK124173	-247848	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-248661	+	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	45938	+	BC069109 NM_021635 AF189269 AF189270	102428	-	TSC_hg19_v1_chr6_+_138725355 NM_014320 AF117616 BC016806 BC016807 AK057928 AY427823	288187	+	DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_014320|HEBP2|23593|heme binding protein 2##AF117616|HEBP2|23593|heme binding protein 2##BC016806|HEBP2|23593|heme binding protein 2##BC016807|HEBP2|23593|heme binding protein 2##AK057928|HEBP2|23593|heme binding protein 2##AY427823|HEBP2|23593|heme binding protein 2	0.987401	CTCF.p2:-12:0.987
chr11	120555766	120555874	reg1005785.p1	12.287	+	AB384776 NM_014619 S67803	-24793	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-173355	+	BC063117 NM_001198665 NM_015313	-348203	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	338990	+	NM_005422	417554	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	607585	+	NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.794052	CTCF.p2:-14:0.794
chr14	61923480	61923613	reg1005939.p2	12.287	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-135019	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-175024	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-175352	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	238644	+	FJ790247 NM_001243084	240793	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	305573	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.996067	CTCF.p2:-1:0.996
chr16	53193904	53194042	reg1008460.p1	12.287	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	-28913	+	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	-60874	+	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	-105092	+	NM_001207030	211067	-	TSC_hg19_v1_chr16_+_53468350 NM_005611	274379	+	TSC_hg19_v1_chr16_+_53468362 BC034490	274390	+	DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_001207030|LOC643802|643802|u3 small nucleolar ribonucleoprotein protein MPP10-like##NM_005611|RBL2|5934|retinoblastoma-like 2 (p130)##BC034490|RBL2|5934|retinoblastoma-like 2 (p130)	0.914069	CTCF.p2:-1:0.914
chr8	64303987	64304102	reg1006583.p2	12.287	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-222844	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-222900	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-305417	-	NM_152414 AK293979	1188814	+	TSC_hg19_v1_chr8_+_65493611 AK091333	1189620	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	1407235	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.024807	
chr1	27743118	27743255	reg1005721.p1	12.286	+	BC001524 BC001855 AK024540 TSC_hg19_v1_chr1_-_27732180 AY007122	-11002	-	BC032702 NM_005281 TSC_hg19_v1_chr1_+_27719158 AK291185 AK314868	-24020	+	BC137466 AY358761 NM_207397	-33394	-	TSC_hg19_v1_chr1_-_27816621 AK303011 BC032724 BC050093 BC040943	73414	-	TSC_hg19_v1_chr1_-_27816670 BC012329	73485	-	TSC_hg19_v1_chr1_-_27816676 NM_001201404 NM_006990	73490	-	BC001524|WASF2|10163|WAS protein family, member 2##BC001855|WASF2|10163|WAS protein family, member 2##AK024540|WASF2|10163|WAS protein family, member 2##AY007122|WASF2|10163|WAS protein family, member 2##BC032702|GPR3|2827|G protein-coupled receptor 3##NM_005281|GPR3|2827|G protein-coupled receptor 3##AK291185|GPR3|2827|G protein-coupled receptor 3##AK314868|GPR3|2827|G protein-coupled receptor 3##BC137466|CD164L2|388611|CD164 sialomucin-like 2##AY358761|CD164L2|388611|CD164 sialomucin-like 2##NM_207397|CD164L2|388611|CD164 sialomucin-like 2##AK303011|WASF2|10163|WAS protein family, member 2##BC032724|WASF2|10163|WAS protein family, member 2##BC040943|WASF2|10163|WAS protein family, member 2##BC012329|WASF2|10163|WAS protein family, member 2##NM_001201404|WASF2|10163|WAS protein family, member 2##NM_006990|WASF2|10163|WAS protein family, member 2	0.904799	CTCF.p2:13:0.905
chr20	52713391	52713531	reg1007921.p1	12.286	+	AK315220 NM_003657	-26158	-	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	-26399	-	TSC_hg19_v1_chr20_-_52210810 AK290350	-502662	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	77059	-	TSC_hg19_v1_chr20_+_52824396 NM_002623	110986	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	111176	+	AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK290350|ZNF217|7764|zinc finger protein 217##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_002623|PFDN4|5203|prefoldin subunit 4##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4	0.808014	CTCF.p2:-9:0.808
chr13	48908792	48908941	reg1007321.p1	12.285	+	TSC_hg19_v1_chr13_+_48878045 M33647 AB384726 CU691646 DQ891564 DQ894752	-30820	+	TSC_hg19_v1_chr13_+_48877982 AB208788	-30900	+	TSC_hg19_v1_chr13_+_48877902 L41870 M15400 M19701 M28419	-30945	+	AK223389 BC070295 BC054346 TSC_hg19_v1_chr13_-_48987235 BC040850	78264	-	BX537445 AK123059 BX537392 BX537438 BX647109 TSC_hg19_v1_chr13_-_48987250	78389	-	NM_001162498	78786	-	M33647|RB1|5925|retinoblastoma 1##DQ891564|RB1|5925|retinoblastoma 1##DQ894752|RB1|5925|retinoblastoma 1##AB208788|RB1|5925|retinoblastoma 1##L41870|RB1|5925|retinoblastoma 1##M15400|RB1|5925|retinoblastoma 1##M19701|RB1|5925|retinoblastoma 1##M28419|RB1|5925|retinoblastoma 1##AK223389|LPAR6|10161|lysophosphatidic acid receptor 6##BC070295|LPAR6|10161|lysophosphatidic acid receptor 6##BC054346|LPAR6|10161|lysophosphatidic acid receptor 6##BC040850|LPAR6|10161|lysophosphatidic acid receptor 6##BX537445|LPAR6|10161|lysophosphatidic acid receptor 6##AK123059|LPAR6|10161|lysophosphatidic acid receptor 6##BX537392|LPAR6|10161|lysophosphatidic acid receptor 6##BX537438|LPAR6|10161|lysophosphatidic acid receptor 6##BX647109|LPAR6|10161|lysophosphatidic acid receptor 6##NM_001162498|LPAR6|10161|lysophosphatidic acid receptor 6	0.534312	CTCF.p2:-5:0.534
chr15	68447427	68447552	reg1007994.p1	12.285	+	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	-100828	+	AF167160 NM_016166 BC118587 BC121797 TSC_hg19_v1_chr15_+_68346652 AK314515 BC104646	-100877	+	NM_001031807	-329549	+	TSC_hg19_v1_chr15_-_68497633 BX640702 BC009516 AK092628 AK296804 AX747637	50148	-	TSC_hg19_v1_chr15_-_68498423 BX640817 NM_001031733 NM_033429	50927	-	CR457244 DQ891480 EU176598 BC013130 BC010849 TSC_hg19_v1_chr15_-_68522011 AK291175 AK293155 AK000568 AK027604 NM_017882	74517	-	BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1##AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1##NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1##BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1##BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1##AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1##BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1##NM_001031807|SKOR1|390598|SKI family transcriptional corepressor 1##BX640702|CALML4|91860|calmodulin-like 4##BC009516|CALML4|91860|calmodulin-like 4##AK092628|CALML4|91860|calmodulin-like 4##AK296804|CALML4|91860|calmodulin-like 4##BX640817|CALML4|91860|calmodulin-like 4##NM_001031733|CALML4|91860|calmodulin-like 4##NM_033429|CALML4|91860|calmodulin-like 4##CR457244|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##DQ891480|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##EU176598|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC013130|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC010849|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK291175|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK293155|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK000568|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK027604|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##NM_017882|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant	0.90197	CTCF.p2:2:0.902
chr15	99062418	99062565	reg1007727.p1	12.284	+	AK097062 AK097062 NM_182562	-4881	-	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	-558540	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	-558572	+	TSC_hg19_v1_chr15_+_99191767 AB425196	129480	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	130265	+	BC104743 BC104744 BC105686 NM_001102612	486346	-	AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like	1.396848	CTCF.p2:0:1.000	CTCF.p2:37:0.397
chr7	38375334	38375480	reg1008244.p1	12.284	+	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	-203	-	BC062761 BC105589 AF151103 NM_001003799 NM_001003806	-62168	-	TSC_hg19_v1_chr7_+_38217932 AK091579 AX747072 AJ492267 AY358645 BC005959	-157449	+	Y00482 TSC_hg19_v1_chr7_-_38389512	14069	-	TSC_hg19_v1_chr7_-_38389583 BC035592	14182	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	295555	-	BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)##BC062761|TRGV9|6983|T cell receptor gamma variable 9##BC105589|TARP|445347|TCR gamma alternate reading frame protein##AF151103|TARP|445347|TCR gamma alternate reading frame protein##NM_001003799|TARP|445347|TCR gamma alternate reading frame protein##NM_001003806|TARP|445347|TCR gamma alternate reading frame protein##AK091579|STARD3NL|83930|STARD3 N-terminal like##AJ492267|STARD3NL|83930|STARD3 N-terminal like##AY358645|STARD3NL|83930|STARD3 N-terminal like##BC005959|STARD3NL|83930|STARD3 N-terminal like##BC035592|TRGV5|6978|T cell receptor gamma variable 5##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin	1.201787	CTCF.p2:-23:0.999	CTCF.p2:44:0.203
chr11	129793327	129793444	reg1007390.p1	12.283	+	TSC_hg19_v1_chr11_-_129765482 NM_001143835	-27904	-	TSC_hg19_v1_chr11_-_129765469 AK299794	-27915	-	TSC_hg19_v1_chr11_-_129765453 BC063280	-27943	-	AB033057 AB385439 BC117415 BC143612 BC143613 AF503171 AF275817 NM_199438 NM_199439	24023	-	AK310354 TSC_hg19_v1_chr11_-_129872691	79304	-	TSC_hg19_v1_chr11_-_129872731 BC112934 AL833172 BX648944 NM_020228 NM_199437	79349	-	NM_001143835|NFRKB|4798|nuclear factor related to kappaB binding protein##BC063280|NFRKB|4798|nuclear factor related to kappaB binding protein##AB033057|PRDM10|56980|PR domain containing 10##BC117415|PRDM10|56980|PR domain containing 10##BC143612|PRDM10|56980|PR domain containing 10##BC143613|PRDM10|56980|PR domain containing 10##AF503171|PRDM10|56980|PR domain containing 10##AF275817|PRDM10|56980|PR domain containing 10##NM_199438|PRDM10|56980|PR domain containing 10##NM_199439|PRDM10|56980|PR domain containing 10##AK310354|PRDM10|56980|PR domain containing 10##BC112934|PRDM10|56980|PR domain containing 10##AL833172|PRDM10|56980|PR domain containing 10##BX648944|PRDM10|56980|PR domain containing 10##NM_020228|PRDM10|56980|PR domain containing 10##NM_199437|PRDM10|56980|PR domain containing 10	0.371771	CTCF.p2:-9:0.372
chr1	16571006	16571139	reg1005852.p2	12.283	+	NM_030907	-7414	-	BC040640 NM_153213 AK091281 AX746893 AK297707	-31938	-	EU826606 DQ895231 EU176326 TSC_hg19_v1_chr1_-_16482565 M59371 BC037166 AK296788 NM_004431	-88546	-	TSC_hg19_v1_chr1_-_16678922 AK310671	107846	-	TSC_hg19_v1_chr1_-_16678969 BC063864 NM_018994 AK055598 BC043410	107876	-	NM_001114600 NM_015609 BC023988 TSC_hg19_v1_chr1_+_16693726 BX640985 AJ295987 AB097042 AB097043 AB097046 AK297926 AK298576 AK308787 AL050028 AK316205 BC065538 AB097044 AB097045 BC010631	122599	+	NM_030907|RSG1|79363|REM2 and RAB-like small GTPase 1##BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##EU826606|EPHA2|1969|EPH receptor A2##DQ895231|EPHA2|1969|EPH receptor A2##EU176326|EPHA2|1969|EPH receptor A2##M59371|EPHA2|1969|EPH receptor A2##BC037166|EPHA2|1969|EPH receptor A2##AK296788|EPHA2|1969|EPH receptor A2##NM_004431|EPHA2|1969|EPH receptor A2##AK310671|FBXO42|54455|F-box protein 42##BC063864|FBXO42|54455|F-box protein 42##NM_018994|FBXO42|54455|F-box protein 42##AK055598|FBXO42|54455|F-box protein 42##BC043410|FBXO42|54455|F-box protein 42##NM_001114600|C1orf144|26099|chromosome 1 open reading frame 144##NM_015609|C1orf144|26099|chromosome 1 open reading frame 144##BC023988|C1orf144|26099|chromosome 1 open reading frame 144##BX640985|C1orf144|26099|chromosome 1 open reading frame 144##AJ295987|C1orf144|26099|chromosome 1 open reading frame 144##AB097042|C1orf144|26099|chromosome 1 open reading frame 144##AB097043|C1orf144|26099|chromosome 1 open reading frame 144##AB097046|C1orf144|26099|chromosome 1 open reading frame 144##AK297926|C1orf144|26099|chromosome 1 open reading frame 144##AK298576|C1orf144|26099|chromosome 1 open reading frame 144##AK308787|C1orf144|26099|chromosome 1 open reading frame 144##AL050028|C1orf144|26099|chromosome 1 open reading frame 144##AK316205|C1orf144|26099|chromosome 1 open reading frame 144##BC065538|C1orf144|26099|chromosome 1 open reading frame 144##AB097044|C1orf144|26099|chromosome 1 open reading frame 144##AB097045|C1orf144|26099|chromosome 1 open reading frame 144##BC010631|C1orf144|26099|chromosome 1 open reading frame 144	0.979345	CTCF.p2:-3:0.979
chr18	12659980	12660102	reg1005687.p2	12.283	+	AF068295 AF161378 NM_147163	-1304	+	AK095621 TSC_hg19_v1_chr18_+_12658217	-1837	+	NM_001128626 NM_020148 TSC_hg19_v1_chr18_-_12657981 AB032961	-2054	-	TSC_hg19_v1_chr18_-_12702689 AK022604 BC033026 AL833727 BC026307 NM_024899 AK303117	42634	-	TSC_hg19_v1_chr18_-_12702776 AK298223	42723	-	TSC_hg19_v1_chr18_+_12703040 NM_020232 AK225882 AF168712 AK057005 BC013356 CU680576	42995	+	AF068295|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AF161378|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##NM_147163|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##NM_001128626|SPIRE1|56907|spire homolog 1 (Drosophila)##NM_020148|SPIRE1|56907|spire homolog 1 (Drosophila)##AB032961|SPIRE1|56907|spire homolog 1 (Drosophila)##AK022604|CEP76|79959|centrosomal protein 76kDa##BC033026|CEP76|79959|centrosomal protein 76kDa##AL833727|CEP76|79959|centrosomal protein 76kDa##BC026307|CEP76|79959|centrosomal protein 76kDa##NM_024899|CEP76|79959|centrosomal protein 76kDa##AK303117|CEP76|79959|centrosomal protein 76kDa##AK298223|CEP76|79959|centrosomal protein 76kDa##NM_020232|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK225882|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AF168712|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK057005|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##BC013356|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2	0.834503	CTCF.p2:0:0.835
chr20	41816507	41816642	reg1005863.p2	12.283	+	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-1569513	-	AB089149 NM_052846	-1821077	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	-1847059	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	1936	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	269918	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	270029	+	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3##AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6	0.97431	CTCF.p2:-5:0.974
chr22	25154265	25154387	reg1006004.p1	12.283	+	TSC_hg19_v1_chr22_+_25003637 NM_001032365	-150703	+	AL832738 TSC_hg19_v1_chr22_+_24999158 NM_001032364 BC035341 NM_005265 L20494 J04131	-155133	+	TSC_hg19_v1_chr22_-_24989036 BC032388 BC108684 NM_207644 AK097054	-165314	-	AB079368 NM_001008496 AK302409 AK315806	16358	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	47884	+	BC130647 BC130649 CR456388 NM_001001663	180986	-	NM_001032365|GGT1|2678|gamma-glutamyltransferase 1##AL832738|GGT1|2678|gamma-glutamyltransferase 1##NM_001032364|GGT1|2678|gamma-glutamyltransferase 1##BC035341|GGT1|2678|gamma-glutamyltransferase 1##NM_005265|GGT1|2678|gamma-glutamyltransferase 1##L20494|GGT1|2678|gamma-glutamyltransferase 1##J04131|GGT1|2678|gamma-glutamyltransferase 1##BC032388|FAM211B|388886|family with sequence similarity 211, member B##BC108684|FAM211B|388886|family with sequence similarity 211, member B##NM_207644|FAM211B|388886|family with sequence similarity 211, member B##AK097054|FAM211B|388886|family with sequence similarity 211, member B##AB079368|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001008496|PIWIL3|440822|piwi-like 3 (Drosophila)##AK302409|PIWIL3|440822|piwi-like 3 (Drosophila)##AK315806|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211	0.999594	CTCF.p2:6:1.000
chr10	103539745	103539884	reg1007933.p1	12.282	+	AB014615 U36223 U46211 U46212 U46213 U56978 BC069106 BC128235 BC128236 NM_006119 NM_033163 NM_033164 NM_033165	-4107	-	TSC_hg19_v1_chr10_-_103454921 AF281859	-84852	-	AK314735 TSC_hg19_v1_chr10_-_103454693 NM_022039	-85100	-	NM_001206389	311	-	CU691104 BC041067 TSC_hg19_v1_chr10_-_103543153 BC054868	3336	-	TSC_hg19_v1_chr10_-_103543157 AF081280 AY049737 NM_006993	3357	-	AB014615|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U36223|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46211|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46212|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46213|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U56978|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC069106|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC128235|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC128236|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_006119|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033163|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033164|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033165|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##AF281859|FBXW4|6468|F-box and WD repeat domain containing 4##AK314735|FBXW4|6468|F-box and WD repeat domain containing 4##NM_022039|FBXW4|6468|F-box and WD repeat domain containing 4##NM_001206389|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC041067|NPM3|10360|nucleophosmin/nucleoplasmin 3##BC054868|NPM3|10360|nucleophosmin/nucleoplasmin 3##AF081280|NPM3|10360|nucleophosmin/nucleoplasmin 3##AY049737|NPM3|10360|nucleophosmin/nucleoplasmin 3##NM_006993|NPM3|10360|nucleophosmin/nucleoplasmin 3	1.042897	CTCF.p2:2:0.994
chr14	22025832	22025972	reg1004731.p2	12.282	+	AK293574 AK001276 BC136528 BC136529 AK299931 X98834 AB002358 NM_005407	-20717	-	AK294051 BC024245 AK296414 BC090958 AK289358 TSC_hg19_v1_chr14_-_21994473	-31490	-	EU446825 TSC_hg19_v1_chr14_-_21979476 BC052244 AK000222 BC001650 BC003031 BC014427 NM_019852 AK300289 AK304251 AK304570	-46467	-	AB528817 NM_001005465	12972	-	NM_001005466 AB529274 BC137371 BC137382	77144	-	AB463964 NM_001001912 AY726598	107420	+	AK293574|SALL2|6297|sal-like 2 (Drosophila)##AK001276|SALL2|6297|sal-like 2 (Drosophila)##BC136528|SALL2|6297|sal-like 2 (Drosophila)##BC136529|SALL2|6297|sal-like 2 (Drosophila)##AK299931|SALL2|6297|sal-like 2 (Drosophila)##X98834|SALL2|6297|sal-like 2 (Drosophila)##AB002358|SALL2|6297|sal-like 2 (Drosophila)##NM_005407|SALL2|6297|sal-like 2 (Drosophila)##AK294051|SALL2|6297|sal-like 2 (Drosophila)##BC024245|SALL2|6297|sal-like 2 (Drosophila)##AK296414|SALL2|6297|sal-like 2 (Drosophila)##BC090958|SALL2|6297|sal-like 2 (Drosophila)##AK289358|SALL2|6297|sal-like 2 (Drosophila)##EU446825|METTL3|56339|methyltransferase like 3##BC052244|METTL3|56339|methyltransferase like 3##AK000222|METTL3|56339|methyltransferase like 3##BC001650|METTL3|56339|methyltransferase like 3##BC003031|METTL3|56339|methyltransferase like 3##BC014427|METTL3|56339|methyltransferase like 3##NM_019852|METTL3|56339|methyltransferase like 3##AK300289|METTL3|56339|methyltransferase like 3##AK304251|METTL3|56339|methyltransferase like 3##AK304570|METTL3|56339|methyltransferase like 3##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2	0.997274	CTCF.p2:17:0.987
chr16	58848294	58848405	reg1006250.p1	12.282	+	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-80152	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-129693	-	TSC_hg19_v1_chr16_-_58663742 BC040523 AL833549 NM_016284 NM_206999	-184604	-	AK124734 NM_001796	3222389	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	6307553	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	6307619	-	DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.968839	CTCF.p2:-1:0.969
chr4	10159520	10159632	reg1005113.p1	12.282	+	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-41040	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-41098	-	AK222764 AK225276 TSC_hg19_v1_chr4_-_10118453	-41126	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	299434	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	526825	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	1270956	-	NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##AK222764|WDR1|9948|WD repeat domain 1##AK225276|WDR1|9948|WD repeat domain 1##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1	0.988081	CTCF.p2:-2:0.988
chr6	16206876	16207017	reg1006751.p1	12.282	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-63636	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-77509	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	-77644	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	31905	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	554751	-	NM_001190766	895542	+	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236	0.996123	CTCF.p2:14:0.996
chr14	52243125	52243241	reg1007702.p1	12.280	+	TSC_hg19_v1_chr14_+_52118627 BX161430 NM_152330 BC020521 AK315764 AK055545 BX647863	-124553	+	AL833158 NM_001042481	-287329	+	NM_030755 AB048246 TSC_hg19_v1_chr14_+_51706980 AK302416 BC036460 BC016769 BC050366 AK075395 BC032834 AK303134 AL080080 BC056874 AY358640 AK312905 DQ891674 DQ894860 CU690352	-536234	+	NM_001243773 NM_001243774 NM_053064 AK092371	83893	+	TSC_hg19_v1_chr14_+_52327329 AK307171	84140	+	AK001024 AK311334 TSC_hg19_v1_chr14_+_52327363	84181	+	BX161430|FRMD6|122786|FERM domain containing 6##NM_152330|FRMD6|122786|FERM domain containing 6##BC020521|FRMD6|122786|FERM domain containing 6##AK315764|FRMD6|122786|FERM domain containing 6##AK055545|FRMD6|122786|FERM domain containing 6##BX647863|FRMD6|122786|FERM domain containing 6##AL833158|FRMD6|122786|FERM domain containing 6##NM_001042481|FRMD6|122786|FERM domain containing 6##NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1##AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1##BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1##BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1##BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1##AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1##BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1##AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1##AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1##BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1##AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1##AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1##NM_001243773|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_001243774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	0.949884	CTCF.p2:4:0.950
chr18	3129393	3129524	reg1006008.p1	12.280	+	BC152448 D87436 NM_014646	-117514	-	AB026706 TSC_hg19_v1_chr18_+_2907037	-222457	+	TSC_hg19_v1_chr18_+_2847006 AF270513 NM_032048 BC032231 BC136541	-282427	+	BC116183 BC116184 TSC_hg19_v1_chr18_-_3219875	90402	-	TSC_hg19_v1_chr18_-_3219987 AJ621424 AK125322 NM_003803 NM_019856	90587	-	BC031972 NM_006471	118069	+	BC152448|LPIN2|9663|lipin 2##D87436|LPIN2|9663|lipin 2##NM_014646|LPIN2|9663|lipin 2##AB026706|EMILIN2|84034|elastin microfibril interfacer 2##AF270513|EMILIN2|84034|elastin microfibril interfacer 2##NM_032048|EMILIN2|84034|elastin microfibril interfacer 2##BC032231|EMILIN2|84034|elastin microfibril interfacer 2##BC136541|EMILIN2|84034|elastin microfibril interfacer 2##BC116183|MYOM1|8736|myomesin 1, 185kDa##BC116184|MYOM1|8736|myomesin 1, 185kDa##AJ621424|MYOM1|8736|myomesin 1, 185kDa##AK125322|MYOM1|8736|myomesin 1, 185kDa##NM_003803|MYOM1|8736|myomesin 1, 185kDa##NM_019856|MYOM1|8736|myomesin 1, 185kDa##BC031972|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric##NM_006471|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric	0.834281	CTCF.p2:-6:0.821
chr2	235197697	235197835	reg1005820.p2	12.280	+	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-238379	+	AY090109 NM_024080 BC126342 BC143819	-371721	+	TSC_hg19_v1_chr2_-_234777033 AK301707	-420729	-	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	207953	-	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	662892	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	1205037	+	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##AK301707|MSL3P1|151507|male-specific lethal 3 homolog (Drosophila) pseudogene 1##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.993901	CTCF.p2:-18:0.994
chr11	36153400	36153537	reg1007461.p1	12.279	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	-187857	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-468795	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-469018	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	157485	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	157518	-	NM_001160167 AK055042	164312	+	BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9##NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like	0.912628	CTCF.p2:5:0.913
chr11	3631019	3631126	reg1006055.p1	12.279	+	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	-230693	-	AK293940 NM_001039165	-377457	-	AB529240 AY255583 NM_001164377	-391030	-	NM_053017 NM_001079536 Y16835	32442	-	BC017828 BC069102 NM_004314 S74683 BC111729	35298	+	AB528800 AJ278118 AJ295237 BC136250 BC143303 AF199235 NM_020402	61506	-	BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195##AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##NM_053017|ART5|116969|ADP-ribosyltransferase 5##NM_001079536|ART5|116969|ADP-ribosyltransferase 5##Y16835|ART5|116969|ADP-ribosyltransferase 5##BC017828|ART1|417|ADP-ribosyltransferase 1##BC069102|ART1|417|ADP-ribosyltransferase 1##NM_004314|ART1|417|ADP-ribosyltransferase 1##S74683|ART1|417|ADP-ribosyltransferase 1##BC111729|ART1|417|ADP-ribosyltransferase 1##AJ278118|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AJ295237|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC136250|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC143303|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AF199235|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##NM_020402|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10	0.921762	CTCF.p2:14:0.922
chr3	122661868	122661994	reg1006298.p1	12.279	+	TSC_hg19_v1_chr3_+_122513981 AK075158	-147927	+	TSC_hg19_v1_chr3_+_122513913 NM_032839 AK027690 AK291176 BC039821 BC033738	-148015	+	CU680100 CU687786 DQ893066 DQ896319 AB590214 AK096705 BC063629 TSC_hg19_v1_chr3_-_122512667 AF400663 BC011897 AK289410 NM_024610	-149328	-	TSC_hg19_v1_chr3_-_122746315 BC077726 AB040878	84435	-	AK309834 TSC_hg19_v1_chr3_-_122746553 AK294528	84620	-	TSC_hg19_v1_chr3_-_122746576 AK291407 NM_001031702	84643	-	AK075158|DIRC2|84925|disrupted in renal carcinoma 2##NM_032839|DIRC2|84925|disrupted in renal carcinoma 2##AK027690|DIRC2|84925|disrupted in renal carcinoma 2##AK291176|DIRC2|84925|disrupted in renal carcinoma 2##BC039821|DIRC2|84925|disrupted in renal carcinoma 2##BC033738|DIRC2|84925|disrupted in renal carcinoma 2##DQ893066|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##DQ896319|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK096705|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC063629|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AF400663|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC011897|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK289410|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##NM_024610|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC077726|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AB040878|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK309834|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK294528|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK291407|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##NM_001031702|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B	0.226753	CTCF.p2:-18:0.227
chr1	59012499	59012632	reg1005817.p1	12.278	+	TSC_hg19_v1_chr1_-_59012387 AF263547 NM_145243 AB048348 BC012915 AK308847	-142	-	TSC_hg19_v1_chr1_-_58716210 AK095513 NM_021080	-296356	-	TSC_hg19_v1_chr1_-_58716179 CR933698 AB210012	-296383	-	BT007255 CR542260 DQ892601 DQ895835 X13425 BC009409 TSC_hg19_v1_chr1_-_59042925	30312	-	NM_002353	30600	-	TSC_hg19_v1_chr1_-_59147727 BC017579	135181	-	NM_145243|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AB048348|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BC012915|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AK308847|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AK095513|DAB1|1600|disabled homolog 1 (Drosophila)##NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)##CR933698|DAB1|1600|disabled homolog 1 (Drosophila)##AB210012|DAB1|1600|disabled homolog 1 (Drosophila)##BT007255|TACSTD2|4070|tumor-associated calcium signal transducer 2##CR542260|TACSTD2|4070|tumor-associated calcium signal transducer 2##DQ892601|TACSTD2|4070|tumor-associated calcium signal transducer 2##DQ895835|TACSTD2|4070|tumor-associated calcium signal transducer 2##X13425|TACSTD2|4070|tumor-associated calcium signal transducer 2##BC009409|TACSTD2|4070|tumor-associated calcium signal transducer 2##NM_002353|TACSTD2|4070|tumor-associated calcium signal transducer 2	0.0	
chr16	70687728	70687853	reg1006186.p2	12.278	+	NM_001172772	-29896	+	NM_001172771 NM_152456	-73993	+	TSC_hg19_v1_chr16_+_70557732 D87686 BC068974	-130042	+	BC002770 TSC_hg19_v1_chr16_-_70713956	26153	-	AB115770 TSC_hg19_v1_chr16_-_70719700	31908	-	TSC_hg19_v1_chr16_-_70719957 NM_138383	32140	-	NM_001172772|IL34|146433|interleukin 34##NM_001172771|IL34|146433|interleukin 34##NM_152456|IL34|146433|interleukin 34##D87686|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##BC068974|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##BC002770|MTSS1L|92154|metastasis suppressor 1-like##AB115770|MTSS1L|92154|metastasis suppressor 1-like##NM_138383|MTSS1L|92154|metastasis suppressor 1-like	0.721327	CTCF.p2:13:0.721
chr17	64161782	64161910	reg1005725.p2	12.278	+	BC029524 NM_001037325	-339186	-	CR933657 TSC_hg19_v1_chr17_-_63557767	-604078	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	-604167	-	BC131805 TSC_hg19_v1_chr17_-_64188195 BC037991 NM_145036 AK299075 AK096929 NM_001199165	26335	-	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	63679	-	TSC_hg19_v1_chr17_+_64298733 BC053321	136904	+	BC029524|CEP112|201134|centrosomal protein 112kDa##NM_001037325|CEP112|201134|centrosomal protein 112kDa##CR933657|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##BC131805|CEP112|201134|centrosomal protein 112kDa##BC037991|CEP112|201134|centrosomal protein 112kDa##NM_145036|CEP112|201134|centrosomal protein 112kDa##AK299075|CEP112|201134|centrosomal protein 112kDa##AK096929|CEP112|201134|centrosomal protein 112kDa##NM_001199165|CEP112|201134|centrosomal protein 112kDa##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC053321|PRKCA|5578|protein kinase C, alpha	0.984889	CTCF.p2:7:0.985
chr7	55661547	55661721	reg1007422.p2	12.278	+	TSC_hg19_v1_chr7_-_55640198 NM_030796	-21424	-	TSC_hg19_v1_chr7_-_55640196 AK075391 AK225755	-21471	-	BC016650 AK314338 TSC_hg19_v1_chr7_-_55640107	-21529	-	AK301928 NM_207366	268828	-	TSC_hg19_v1_chr7_+_55955148 BC094796 BC048108	293535	+	AK097282 NM_182633 AB464411	318714	+	NM_030796|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK075391|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK225755|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##BC016650|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK314338|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK301928|SEPT14|346288|septin 14##NM_207366|SEPT14|346288|septin 14##BC094796|ZNF713|349075|zinc finger protein 713##AK097282|ZNF713|349075|zinc finger protein 713##NM_182633|ZNF713|349075|zinc finger protein 713	0.999899	CTCF.p2:8:1.000
chr8	33192365	33192494	reg1008318.p1	12.278	+	TSC_hg19_v1_chr8_+_32785485 BC034319	-406940	+	NM_001159996 AK293270 AK293240	-613037	+	AK289927 NM_013959	-688179	+	TSC_hg19_v1_chr8_-_33330616 BC004884	138184	-	AK098505 AK297132 TSC_hg19_v1_chr8_-_33330636 AK303231 AJ512465 AJ535838 AJ535839 AK292993 AJ582015 NM_032664	138217	-	NM_032509 TSC_hg19_v1_chr8_+_33342703 AK314491 AK225476 AK027469 BC015965 AF251062 BC039740 BC028230 BC050528 CU690708	150275	+	NM_001159996|NRG1|3084|neuregulin 1##AK293270|NRG1|3084|neuregulin 1##AK293240|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1##BC004884|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK098505|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK297132|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK303231|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ512465|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535838|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535839|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK292993|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ582015|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032664|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032509|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK314491|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK225476|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK027469|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC015965|MAK16|84549|MAK16 homolog (S. cerevisiae)##AF251062|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC039740|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC028230|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC050528|MAK16|84549|MAK16 homolog (S. cerevisiae)	0.980757	CTCF.p2:9:0.981
chr15	40509510	40509626	reg1005769.p1	12.276	+	TSC_hg19_v1_chr15_+_40453269 AK296984 AF107297 BC018739 AF046918 AB208782 AF035933 AF068760 AF046079 AB384719 CU676304	-56226	+	NM_001211 AF053306 TSC_hg19_v1_chr15_+_40453249 AK296795 AK312709	-56339	+	TSC_hg19_v1_chr15_-_40401076 BC060783 BC070043 NM_001003940	-108473	-	AK315817 NM_001128628 NM_001128629 AK315813 AK290227	139	+	TSC_hg19_v1_chr15_+_40531273 AK131522	21703	+	NM_020168 AJ236915	22485	+	AK296984|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF107297|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##BC018739|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF046918|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AB208782|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF035933|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF068760|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF046079|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##NM_001211|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF053306|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AK296795|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AK312709|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##BC060783|BMF|90427|Bcl2 modifying factor##BC070043|BMF|90427|Bcl2 modifying factor##NM_001003940|BMF|90427|Bcl2 modifying factor##AK315817|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##NM_001128628|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##NM_001128629|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AK315813|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AK290227|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AK131522|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##NM_020168|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AJ236915|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6	0.084446	
chrX	68607547	68607664	reg1004946.p2	12.276	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	-222299	-	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	-558750	+	TSC_hg19_v1_chrX_+_67913490 D80011	-694114	+	AF087142 NM_015686 BC136518 BC136519	117478	+	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	228330	+	AB528121 AY605053 NM_001002254	662179	-	AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B##AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A##AY605053|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##NM_001002254|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2	0.189347	
chr20	58632567	58632681	reg1008044.p1	12.275	+	TSC_hg19_v1_chr20_+_58630979 AK091179 AX746831 NM_173644	-1629	+	BC062570 NM_021810 AK074477	-61202	+	NM_177980 AK055202	-99149	+	TSC_hg19_v1_chr20_+_58713521 AK309218 AK092805 AX747739	80910	+	TSC_hg19_v1_chr20_+_59827453 BC101651 BC112150 NM_001794 AK315192 L34059	1194881	+	AK308345 NM_001252338	1441852	+	AK091179|C20orf197|284756|chromosome 20 open reading frame 197##NM_173644|C20orf197|284756|chromosome 20 open reading frame 197##BC062570|CDH26|60437|cadherin 26##NM_021810|CDH26|60437|cadherin 26##AK074477|CDH26|60437|cadherin 26##NM_177980|CDH26|60437|cadherin 26##AK055202|CDH26|60437|cadherin 26##AK092805|LOC284757|284757|uncharacterized LOC284757##BC101651|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC112150|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001794|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK315192|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##L34059|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK308345|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252338|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)	0.99968	CTCF.p2:-1:1.000
chr4	24981863	24981970	reg1005513.p2	12.275	+	AK302905 AL834257 NM_173463	-119	-	AK125353 BC057761 BC067735 NM_001130726 TSC_hg19_v1_chr4_-_24914655	-67335	-	TSC_hg19_v1_chr4_+_24797207 BC014418 J02947	-184698	+	AB067503 AF467955 AJ487516 AJ487958 BC101759 BC101761 NM_018176 TSC_hg19_v1_chr4_-_25032569	50521	-	AF146396 AJ277541 BC117202 BC126213 TSC_hg19_v1_chr4_-_25162072 AJ238617 EU832146 EU832239 BC023539 BX648976 BC012188 AK292476 NM_016955	180139	-	AK296302 AK095450 TSC_hg19_v1_chr4_+_25162325	180389	+	AK302905|CCDC149|91050|coiled-coil domain containing 149##AL834257|CCDC149|91050|coiled-coil domain containing 149##NM_173463|CCDC149|91050|coiled-coil domain containing 149##AK125353|CCDC149|91050|coiled-coil domain containing 149##BC057761|CCDC149|91050|coiled-coil domain containing 149##BC067735|CCDC149|91050|coiled-coil domain containing 149##NM_001130726|CCDC149|91050|coiled-coil domain containing 149##BC014418|SOD3|6649|superoxide dismutase 3, extracellular##J02947|SOD3|6649|superoxide dismutase 3, extracellular##AB067503|LGI2|55203|leucine-rich repeat LGI family, member 2##AF467955|LGI2|55203|leucine-rich repeat LGI family, member 2##AJ487516|LGI2|55203|leucine-rich repeat LGI family, member 2##AJ487958|LGI2|55203|leucine-rich repeat LGI family, member 2##BC101759|LGI2|55203|leucine-rich repeat LGI family, member 2##BC101761|LGI2|55203|leucine-rich repeat LGI family, member 2##NM_018176|LGI2|55203|leucine-rich repeat LGI family, member 2##AF146396|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ277541|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC117202|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC126213|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ238617|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832146|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832239|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC023539|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BX648976|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC012188|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AK292476|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##NM_016955|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AK296302|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK095450|LOC285540|285540|uncharacterized LOC285540	0.993794	CTCF.p2:-8:0.994
chr11	126477327	126477460	reg1007882.p1	12.274	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	-201395	+	NM_006278 X74570	-251298	+	TSC_hg19_v1_chr11_-_126225452 AK096370	-251930	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	393267	-	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	393332	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	395912	+	AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK096370|FLJ39051|399972|uncharacterized LOC399972##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)	0.136294	
chr5	150036174	150036272	reg1005698.p2	12.273	+	Y11072 TSC_hg19_v1_chr5_+_150027841	-8382	+	TSC_hg19_v1_chr5_+_150020221 NM_001109974 NM_007286 AK290178 BC042624 BC146665 AB028952 BC152538 BC142683 AF499136 AF499137	-15930	+	AK127049 NM_001166209	-39018	+	AK313873 NM_001122853 NM_133371 AJ300586	4199	+	AB463237 AM393639 TSC_hg19_v1_chr5_-_150080561 AK297019	44344	-	AL136933 TSC_hg19_v1_chr5_-_150080619 BC003402 AK001152 NM_018047	44409	-	Y11072|SYNPO|11346|synaptopodin##NM_001109974|SYNPO|11346|synaptopodin##NM_007286|SYNPO|11346|synaptopodin##AK290178|SYNPO|11346|synaptopodin##BC042624|SYNPO|11346|synaptopodin##BC146665|SYNPO|11346|synaptopodin##AB028952|SYNPO|11346|synaptopodin##BC152538|SYNPO|11346|synaptopodin##BC142683|SYNPO|11346|synaptopodin##AF499136|SYNPO|11346|synaptopodin##AF499137|SYNPO|11346|synaptopodin##AK127049|SYNPO|11346|synaptopodin##NM_001166209|SYNPO|11346|synaptopodin##AK313873|MYOZ3|91977|myozenin 3##NM_001122853|MYOZ3|91977|myozenin 3##NM_133371|MYOZ3|91977|myozenin 3##AJ300586|MYOZ3|91977|myozenin 3##AM393639|RBM22|55696|RNA binding motif protein 22##AK297019|RBM22|55696|RNA binding motif protein 22##AL136933|RBM22|55696|RNA binding motif protein 22##BC003402|RBM22|55696|RNA binding motif protein 22##AK001152|RBM22|55696|RNA binding motif protein 22##NM_018047|RBM22|55696|RNA binding motif protein 22	0.0	
chr2	177517177	177517316	reg1008601.p1	12.272	+	BC013438 TSC_hg19_v1_chr2_-_177502718	-14558	-	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-383007	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-463830	+	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	560228	+	AK311688 NM_001145412 NM_001145413	611325	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	612130	-	BC013438|LOC375295|375295|uncharacterized LOC375295##NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.995097	CTCF.p2:-1:0.995
chr2	135208551	135208676	reg1006327.p1	12.271	+	NM_002410 D17716 AF113921	-196728	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-882575	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-1029259	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	267943	-	AK125008 NM_138326 BC016018 BC107420 AB071418	387605	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	467784	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	1.235931	CTCF.p2:27:0.300	CTCF.p2:-32:0.936
chr6	53516067	53516205	reg1008362.p1	12.270	+	TSC_hg19_v1_chr6_-_53409900 AK304288 NM_001197115 NM_001498	-106225	-	TSC_hg19_v1_chr6_-_53409836 AK313480	-106301	-	TSC_hg19_v1_chr6_-_53409821 AB262176 BC022487	-106323	-	EF633513 NM_001003760	14369	-	TSC_hg19_v1_chr6_+_53659294 AK021896	143164	+	TSC_hg19_v1_chr6_+_53659776 BC003193 NM_018214	143623	+	AK304288|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001197115|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001498|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK313480|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AB262176|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC022487|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EF633513|KLHL31|401265|kelch-like 31 (Drosophila)##NM_001003760|KLHL31|401265|kelch-like 31 (Drosophila)##AK021896|LRRC1|55227|leucine rich repeat containing 1##BC003193|LRRC1|55227|leucine rich repeat containing 1##NM_018214|LRRC1|55227|leucine rich repeat containing 1	0.943782	CTCF.p2:6:0.944
chr1	63212304	63212447	reg1008629.p1	12.269	+	DQ341187 TSC_hg19_v1_chr1_-_63154045 AK055401 NM_033407 AK292640	-58248	-	NM_014495 AK315304 TSC_hg19_v1_chr1_+_63063190 AK289426 BC007059 BC058287 AY358273 AF152562 AB590604 CU691298	-149164	+	TSC_hg19_v1_chr1_+_62902747 BC032364 AB208893 AF117386 AB014458	-309488	+	TSC_hg19_v1_chr1_+_63249807 NM_032852 NM_178221 AK027773 BC018678 BC033024 BC008395	37438	+	AB464527 NM_012183	576354	+	TSC_hg19_v1_chr1_+_63789065 L12142	576709	+	DQ341187|DOCK7|85440|dedicator of cytokinesis 7##AK055401|DOCK7|85440|dedicator of cytokinesis 7##NM_033407|DOCK7|85440|dedicator of cytokinesis 7##AK292640|DOCK7|85440|dedicator of cytokinesis 7##NM_014495|ANGPTL3|27329|angiopoietin-like 3##AK315304|ANGPTL3|27329|angiopoietin-like 3##AK289426|ANGPTL3|27329|angiopoietin-like 3##BC007059|ANGPTL3|27329|angiopoietin-like 3##BC058287|ANGPTL3|27329|angiopoietin-like 3##AY358273|ANGPTL3|27329|angiopoietin-like 3##AF152562|ANGPTL3|27329|angiopoietin-like 3##BC032364|USP1|7398|ubiquitin specific peptidase 1##AB208893|USP1|7398|ubiquitin specific peptidase 1##AF117386|USP1|7398|ubiquitin specific peptidase 1##AB014458|USP1|7398|ubiquitin specific peptidase 1##NM_032852|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_178221|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##AK027773|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC018678|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC033024|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC008395|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_012183|FOXD3|27022|forkhead box D3##L12142|FOXD3|27022|forkhead box D3	0.970021	CTCF.p2:20:0.970
chr17	34274236	34274352	reg1006873.p1	12.269	+	BC054481 NM_001199951	-3608	-	CU691088 AY742214 AY359018 NM_020426	-7835	-	AB528914 EF488474 EF488475 EF488476 EF488477 EF488478 BC032114 AK302782 AB080728 TSC_hg19_v1_chr17_-_34257778 BC127190 BC038301 NM_001034836 NM_001163120 NM_001163121 NM_145654	-16536	-	AB527929 U91746 AF055467 BC096352 BC099662 BC099663 BC099664 AF039955 NM_004590 AB007454 AK309593	34199	-	AB527896 HQ257907 BC038289 BC050647 Z49270 BC045165 NM_032962 NM_032963 TSC_hg19_v1_chr17_-_34313766 AX772826	39445	-	AB463484 AF031587 Z70292 Z70293 TSC_hg19_v1_chr17_-_34328592 U58914	54267	-	BC054481|LYZL6|57151|lysozyme-like 6##NM_001199951|LYZL6|57151|lysozyme-like 6##AY742214|LYZL6|57151|lysozyme-like 6##AY359018|LYZL6|57151|lysozyme-like 6##NM_020426|LYZL6|57151|lysozyme-like 6##EF488474|RDM1|201299|RAD52 motif 1##EF488475|RDM1|201299|RAD52 motif 1##EF488476|RDM1|201299|RAD52 motif 1##EF488477|RDM1|201299|RAD52 motif 1##EF488478|RDM1|201299|RAD52 motif 1##BC032114|RDM1|201299|RAD52 motif 1##AK302782|RDM1|201299|RAD52 motif 1##AB080728|RDM1|201299|RAD52 motif 1##BC127190|RDM1|201299|RAD52 motif 1##BC038301|RDM1|201299|RAD52 motif 1##NM_001034836|RDM1|201299|RAD52 motif 1##NM_001163120|RDM1|201299|RAD52 motif 1##NM_001163121|RDM1|201299|RAD52 motif 1##NM_145654|RDM1|201299|RAD52 motif 1##U91746|CCL16|6360|chemokine (C-C motif) ligand 16##AF055467|CCL16|6360|chemokine (C-C motif) ligand 16##BC096352|CCL16|6360|chemokine (C-C motif) ligand 16##BC099662|CCL16|6360|chemokine (C-C motif) ligand 16##BC099663|CCL16|6360|chemokine (C-C motif) ligand 16##BC099664|CCL16|6360|chemokine (C-C motif) ligand 16##AF039955|CCL16|6360|chemokine (C-C motif) ligand 16##NM_004590|CCL16|6360|chemokine (C-C motif) ligand 16##AB007454|CCL16|6360|chemokine (C-C motif) ligand 16##HQ257907|CCL14|6358|chemokine (C-C motif) ligand 14##BC038289|CCL14|6358|chemokine (C-C motif) ligand 14##BC050647|CCL14|6358|chemokine (C-C motif) ligand 14##Z49270|CCL14|6358|chemokine (C-C motif) ligand 14##BC045165|CCL14|6358|chemokine (C-C motif) ligand 14##NM_032962|CCL14|6358|chemokine (C-C motif) ligand 14##NM_032963|CCL14|6358|chemokine (C-C motif) ligand 14##AF031587|CCL15|6359|chemokine (C-C motif) ligand 15##Z70292|CCL14-CCL15|348249|CCL14-CCL15 readthrough##Z70293|CCL14-CCL15|348249|CCL14-CCL15 readthrough##U58914|CCL15|6359|chemokine (C-C motif) ligand 15	0.620828	CTCF.p2:1:0.621
chr8	98565779	98565897	reg1006639.p1	12.269	+	TSC_hg19_v1_chr8_-_98290193 AK091445 AX746987	-275619	-	TSC_hg19_v1_chr8_-_98290171 BC045630 NM_033512	-275665	-	CU692280 AB384285 AB051537 TSC_hg19_v1_chr8_-_98290135	-275730	-	TSC_hg19_v1_chr8_+_98656416 BC045642 NM_178812 BC001815	90539	+	TSC_hg19_v1_chr8_+_98656437 BC014977 AF501310	90621	+	BC022825 TSC_hg19_v1_chr8_+_98656510 BC009324 AF411226 AY082966 AY974040	90775	+	AK091445|TSPYL5|85453|TSPY-like 5##BC045630|TSPYL5|85453|TSPY-like 5##NM_033512|TSPYL5|85453|TSPY-like 5##AB051537|TSPYL5|85453|TSPY-like 5##BC045642|MTDH|92140|metadherin##NM_178812|MTDH|92140|metadherin##BC001815|MTDH|92140|metadherin##BC014977|MTDH|92140|metadherin##AF501310|MTDH|92140|metadherin##BC022825|MTDH|92140|metadherin##BC009324|MTDH|92140|metadherin##AF411226|MTDH|92140|metadherin##AY082966|MTDH|92140|metadherin##AY974040|MTDH|92140|metadherin	0.997129	CTCF.p2:9:0.997
chr11	32982262	32982404	reg1008529.p1	12.266	+	TSC_hg19_v1_chr11_+_32914677 BC112935 NM_001076786	-67758	+	TSC_hg19_v1_chr11_+_32851476 BC010052 NM_024081 BC063393 AF326351	-130783	+	BC146800 AK131470 NM_001008391 BC062749	-166156	-	TSC_hg19_v1_chr11_+_33037423 BC030970 NM_001077242 AK294934 BC011446 AJ245600 AK295960 EU446553 CU689058	55115	+	AF447588 NM_139160	55394	+	NM_018393 AK090646 TSC_hg19_v1_chr11_+_33061117 BC041696	78749	+	BC112935|QSER1|79832|glutamine and serine rich 1##NM_001076786|QSER1|79832|glutamine and serine rich 1##BC010052|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##NM_024081|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC063393|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##AF326351|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC146800|CCDC73|493860|coiled-coil domain containing 73##AK131470|CCDC73|493860|coiled-coil domain containing 73##NM_001008391|CCDC73|493860|coiled-coil domain containing 73##BC062749|CCDC73|493860|coiled-coil domain containing 73##BC030970|DEPDC7|91614|DEP domain containing 7##NM_001077242|DEPDC7|91614|DEP domain containing 7##AK294934|DEPDC7|91614|DEP domain containing 7##BC011446|DEPDC7|91614|DEP domain containing 7##AJ245600|DEPDC7|91614|DEP domain containing 7##AK295960|DEPDC7|91614|DEP domain containing 7##EU446553|DEPDC7|91614|DEP domain containing 7##AF447588|DEPDC7|91614|DEP domain containing 7##NM_139160|DEPDC7|91614|DEP domain containing 7##NM_018393|TCP11L1|55346|t-complex 11 (mouse)-like 1##AK090646|TCP11L1|55346|t-complex 11 (mouse)-like 1##BC041696|TCP11L1|55346|t-complex 11 (mouse)-like 1	0.993897	CTCF.p2:-16:0.994
chr16	28885024	28885139	reg1008186.p1	12.266	+	TSC_hg19_v1_chr16_+_28877593 BC010704	-7492	+	TSC_hg19_v1_chr16_+_28875181 AF227967 AF227968 AF227969 AK290332 NM_001145812 AL713760 NM_015503	-9834	+	NM_001145795 NM_001145796 NM_001145797 TSC_hg19_v1_chr16_+_28875160 AK297080	-9962	+	BX647367 NM_004320 NM_173201 TSC_hg19_v1_chr16_+_28889808 BX537784 BX537389 BX647365 BX648544 BC104452 BC104453 BX647366 BX649072 AK291314 BC037354 AB527323	4819	+	TSC_hg19_v1_chr16_+_28891234 AK128456	6222	+	AY129017 TSC_hg19_v1_chr16_-_28936536 AK295229 BC046118 AK026935 NM_024816 BC058900	51427	-	BC010704|SH2B1|25970|SH2B adaptor protein 1##AF227967|SH2B1|25970|SH2B adaptor protein 1##AF227968|SH2B1|25970|SH2B adaptor protein 1##AF227969|SH2B1|25970|SH2B adaptor protein 1##AK290332|SH2B1|25970|SH2B adaptor protein 1##NM_001145812|SH2B1|25970|SH2B adaptor protein 1##AL713760|SH2B1|25970|SH2B adaptor protein 1##NM_015503|SH2B1|25970|SH2B adaptor protein 1##NM_001145795|SH2B1|25970|SH2B adaptor protein 1##NM_001145796|SH2B1|25970|SH2B adaptor protein 1##NM_001145797|SH2B1|25970|SH2B adaptor protein 1##AK297080|SH2B1|25970|SH2B adaptor protein 1##BX647367|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##NM_004320|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##NM_173201|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX537784|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX537389|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX647365|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX648544|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC104452|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC104453|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX647366|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX649072|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##AK291314|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC037354|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##AK128456|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##AK295229|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC046118|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##AK026935|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##NM_024816|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC058900|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2	0.948893	CTCF.p2:-2:0.949
chr8	9899265	9899388	reg1005778.p1	12.266	+	TSC_hg19_v1_chr8_+_9413439 BC023578 AF082556 NM_003747 AK301798	-485845	+	TSC_hg19_v1_chr8_+_9413423 AK302031	-485903	+	TSC_hg19_v1_chr8_+_9413421 BC098394	-485921	+	TSC_hg19_v1_chr8_+_9911765 AY958429	12443	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	12553	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	53737	+	BC023578|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AF082556|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##NM_003747|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK301798|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK302031|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##BC098394|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AY958429|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A	0.251339	CTCF.p2:1:0.251
chr7	155326654	155326809	reg1008615.p1	12.264	+	BC105732 BC105733 BC105734 BC107598 NM_001103176 AK094445	-184	-	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	-75967	+	AK291675 TSC_hg19_v1_chr7_+_155089667	-237087	+	TSC_hg19_v1_chr7_-_155437101 AK091942 AX747269	110359	-	TSC_hg19_v1_chr7_+_155437147 BC011923	110420	+	TSC_hg19_v1_chr7_+_155437182 NM_053043	110477	+	BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)##BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)##NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)##AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)##BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2##AK291675|INSIG1|3638|insulin induced gene 1##BC011923|RBM33|155435|RNA binding motif protein 33##NM_053043|RBM33|155435|RNA binding motif protein 33	0.066888	
chr19	11593519	11593653	reg1006493.p3	12.263	+	AY036909 L26405 D26158 BC014144 NM_001420 NM_032281 TSC_hg19_v1_chr19_-_11591862	-1933	-	TSC_hg19_v1_chr19_-_11565617 BC068222	-27958	-	BC080533 BC011875 TSC_hg19_v1_chr19_-_11564576	-29014	-	TSC_hg19_v1_chr19_-_11616637 HQ258023 AY072704 BC014187 AK314986 BC016816	22941	-	TSC_hg19_v1_chr19_-_11616689 AK131037 NM_138783	23135	-	AK314905 NM_001243204	46093	-	AY036909|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##L26405|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##D26158|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC014144|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_001420|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_032281|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC080533|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC011875|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##HQ258023|ZNF653|115950|zinc finger protein 653##AY072704|ZNF653|115950|zinc finger protein 653##BC014187|ZNF653|115950|zinc finger protein 653##AK314986|ZNF653|115950|zinc finger protein 653##BC016816|ZNF653|115950|zinc finger protein 653##AK131037|ZNF653|115950|zinc finger protein 653##NM_138783|ZNF653|115950|zinc finger protein 653##AK314905|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001243204|ECSIT|51295|ECSIT homolog (Drosophila)	0.783932	CTCF.p2:3:0.612
chr19	1795911	1796014	reg1006601.p2	12.263	+	TSC_hg19_v1_chr19_+_1776120 AK074606	-19775	+	NM_001080488 TSC_hg19_v1_chr19_+_1753823	-42210	+	M31222 NM_003200 TSC_hg19_v1_chr19_-_1652346	-143623	-	AY302538 NM_001178002 TSC_hg19_v1_chr19_-_1812276 BC035162 NM_138813 AK125225 AK125969	16275	-	AB384122 TSC_hg19_v1_chr19_-_1848439 AB032964 BC016923	52439	-	TSC_hg19_v1_chr19_-_1848471 BC032244 NM_020695	52499	-	NM_001080488|ONECUT3|390874|one cut homeobox 3##M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##AY302538|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001178002|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##BC035162|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_138813|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125225|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125969|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AB032964|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC016923|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC032244|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##NM_020695|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	0.061067	
chr5	156858973	156859097	reg1005902.p2	12.263	+	TSC_hg19_v1_chr5_+_156820161 AK172724	-38847	+	AK289701 BC022570 NM_001001343	-86335	-	BC011762 BC021008 NM_014376	-162679	+	AK296972 NM_001099287 NM_001172292	27991	+	TSC_hg19_v1_chr5_+_156887210 AK026158 AK308830 AK309242	28235	+	AB462931 TSC_hg19_v1_chr5_-_157002728	143681	-	AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK289701|FNDC9|408263|fibronectin type III domain containing 9##BC022570|FNDC9|408263|fibronectin type III domain containing 9##NM_001001343|FNDC9|408263|fibronectin type III domain containing 9##BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK296972|NIPAL4|348938|NIPA-like domain containing 4##NM_001099287|NIPAL4|348938|NIPA-like domain containing 4##NM_001172292|NIPAL4|348938|NIPA-like domain containing 4##AK026158|NIPAL4|348938|NIPA-like domain containing 4##AK308830|NIPAL4|348938|NIPA-like domain containing 4##AK309242|NIPAL4|348938|NIPA-like domain containing 4	0.752503	CTCF.p2:-31:0.753
chr7	28666363	28666498	reg1008037.p1	12.263	+	AK292916 TSC_hg19_v1_chr7_+_28530784	-135665	+	L05911 NM_004904	-191197	+	L05515 NM_182898	-214287	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	59253	+	CU690330 TSC_hg19_v1_chr7_-_28997732	331267	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	331499	-	AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##L05515|CREB5|9586|cAMP responsive element binding protein 5##NM_182898|CREB5|9586|cAMP responsive element binding protein 5##L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats	0.332223	CTCF.p2:-1:0.332
chr1	23000760	23000888	reg1005125.p1	12.262	+	NM_000491 TSC_hg19_v1_chr1_+_22979728 BC008983	-21101	+	NM_001114101 NM_172369 AK057792 TSC_hg19_v1_chr1_+_22970125 AF087892 AK226152 BC009016 AK130613	-30637	+	TSC_hg19_v1_chr1_+_22963170 NM_015991 BC030153 AK311980 BC071986	-37685	+	TSC_hg19_v1_chr1_+_23037331 NM_004442 NM_017449 AK299701 BC067861 AB210018 AF025304 CU686595 L36643	36599	+	NM_001242521	341518	-	TSC_hg19_v1_chr1_+_23345960 NM_001009999 NM_015013	345131	+	NM_000491|C1QB|713|complement component 1, q subcomponent, B chain##BC008983|C1QB|713|complement component 1, q subcomponent, B chain##NM_001114101|C1QC|714|complement component 1, q subcomponent, C chain##NM_172369|C1QC|714|complement component 1, q subcomponent, C chain##AK057792|C1QC|714|complement component 1, q subcomponent, C chain##AF087892|C1QC|714|complement component 1, q subcomponent, C chain##AK226152|C1QC|714|complement component 1, q subcomponent, C chain##BC009016|C1QC|714|complement component 1, q subcomponent, C chain##AK130613|C1QC|714|complement component 1, q subcomponent, C chain##NM_015991|C1QA|712|complement component 1, q subcomponent, A chain##BC030153|C1QA|712|complement component 1, q subcomponent, A chain##AK311980|C1QA|712|complement component 1, q subcomponent, A chain##BC071986|C1QA|712|complement component 1, q subcomponent, A chain##NM_004442|EPHB2|2048|EPH receptor B2##NM_017449|EPHB2|2048|EPH receptor B2##AK299701|EPHB2|2048|EPH receptor B2##BC067861|EPHB2|2048|EPH receptor B2##AB210018|EPHB2|2048|EPH receptor B2##AF025304|EPHB2|2048|EPH receptor B2##L36643|EPHB2|2048|EPH receptor B2##NM_001242521|LOC729059|729059|uncharacterized LOC729059##NM_001009999|KDM1A|23028|lysine (K)-specific demethylase 1A##NM_015013|KDM1A|23028|lysine (K)-specific demethylase 1A	0.991294	CTCF.p2:-2:0.991
chr13	76591068	76591198	reg1007804.p1	12.262	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-256293	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-380663	+	AF330045 NM_005358	-396564	+	BC013764 TSC_hg19_v1_chr13_-_77460431	869267	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	869474	-	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	975036	+	NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5	0.772363	CTCF.p2:1:0.726
chr15	92640946	92641070	reg1006994.p1	12.262	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-243441	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	-243911	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	-244065	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	296191	+	AK057393 NM_153040	373898	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	557871	-	AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B	0.994615	CTCF.p2:-9:0.984
chr3	183484904	183485022	reg1006318.p1	12.262	+	TSC_hg19_v1_chr3_+_183415597 AB033023 BC150273 NM_018023	-69341	+	BC142993 TSC_hg19_v1_chr3_+_183353410 AK026326 AY422472 BX648466 BX648812 NM_017644	-131563	+	AF441792 CU689348 DQ894788 EU176275 TSC_hg19_v1_chr3_-_183273495 AK097125 AK314473 BX648370 BC032348 NM_130446	-211511	-	TSC_hg19_v1_chr3_-_183543366 BC006434 AK022810 NM_024871	58406	-	AF197937 CU678558 DQ893442 DQ896749 TSC_hg19_v1_chr3_-_183602641	117676	-	TSC_hg19_v1_chr3_-_183602648 BC014058	117688	-	AB033023|YEATS2|55689|YEATS domain containing 2##BC150273|YEATS2|55689|YEATS domain containing 2##NM_018023|YEATS2|55689|YEATS domain containing 2##BC142993|KLHL24|54800|kelch-like 24 (Drosophila)##AK026326|KLHL24|54800|kelch-like 24 (Drosophila)##AY422472|KLHL24|54800|kelch-like 24 (Drosophila)##BX648466|KLHL24|54800|kelch-like 24 (Drosophila)##BX648812|KLHL24|54800|kelch-like 24 (Drosophila)##NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)##AF441792|KLHL6|89857|kelch-like 6 (Drosophila)##DQ894788|KLHL6|89857|kelch-like 6 (Drosophila)##EU176275|KLHL6|89857|kelch-like 6 (Drosophila)##AK097125|KLHL6|89857|kelch-like 6 (Drosophila)##AK314473|KLHL6|89857|kelch-like 6 (Drosophila)##BX648370|KLHL6|89857|kelch-like 6 (Drosophila)##BC032348|KLHL6|89857|kelch-like 6 (Drosophila)##NM_130446|KLHL6|89857|kelch-like 6 (Drosophila)##BC006434|MAP6D1|79929|MAP6 domain containing 1##AK022810|MAP6D1|79929|MAP6 domain containing 1##NM_024871|MAP6D1|79929|MAP6 domain containing 1##AF197937|PARL|55486|presenilin associated, rhomboid-like##DQ893442|PARL|55486|presenilin associated, rhomboid-like##DQ896749|PARL|55486|presenilin associated, rhomboid-like##BC014058|PARL|55486|presenilin associated, rhomboid-like	0.970178	CTCF.p2:28:0.970
chr1	229850869	229850979	reg1005812.p2	12.261	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-88910	+	AK291013 TSC_hg19_v1_chr1_+_229761973 D50923 NM_014777 BC059381	-88950	+	NM_001025247 NM_014409 TSC_hg19_v1_chr1_-_229761804	-89126	-	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	352018	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	352072	+	BC150638 NM_024554	662466	-	BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##AK291013|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##D50923|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_014777|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC059381|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_001025247|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_014409|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5	0.904835	CTCF.p2:-4:0.905
chr1	5805985	5806094	reg1005666.p2	12.260	+	AY282806 NM_001042478 NM_018836	-1090935	+	TSC_hg19_v1_chr1_+_4714668 AF175409	-1091310	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-1989194	-	NM_001199861	246318	+	TSC_hg19_v1_chr1_-_6052456 AY118228	246406	-	TSC_hg19_v1_chr1_-_6052507 AK124074 AK314326 AF537130 BC040520 NM_015102	246470	-	AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##AF175409|AJAP1|55966|adherens junctions associated protein 1##BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AY118228|NPHP4|261734|nephronophthisis 4##AK124074|NPHP4|261734|nephronophthisis 4##AK314326|NPHP4|261734|nephronophthisis 4##AF537130|NPHP4|261734|nephronophthisis 4##BC040520|NPHP4|261734|nephronophthisis 4##NM_015102|NPHP4|261734|nephronophthisis 4	0.995633	CTCF.p2:2:0.996
chr17	20130184	20130313	reg1006024.p2	12.260	+	BC033618 TSC_hg19_v1_chr17_+_20108434 AK298601	-21814	+	TSC_hg19_v1_chr17_+_20059384 NM_001033554 NM_001033555 NM_001243438 AK301318 AK304186 AY816326 AY816327 BC021123 BC050058	-70914	+	AY816328 AY816329 NM_001033553 NM_152904 AB041533	-139914	+	TSC_hg19_v1_chr17_+_20224469 BC036241	94218	+	BC105943 AK290263 NM_001042685 AK296659	240587	-	NM_001190790	352788	+	BC033618|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK298601|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033554|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033555|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001243438|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK301318|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK304186|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816326|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816327|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC021123|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC050058|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816328|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816329|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033553|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_152904|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AB041533|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC036241|CCDC144C|348254|coiled-coil domain containing 144C##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK290263|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001042685|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2	0.857059	CTCF.p2:-4:0.857
chr22	22001106	22001223	reg1007043.p1	12.260	+	TSC_hg19_v1_chr22_+_21996619 CR456570 AF277316 AB528230 BC139837 CU013169 CU013457	-4525	+	TSC_hg19_v1_chr22_+_21996608 BC006248 AB043007	-4563	+	TSC_hg19_v1_chr22_+_21996575 AY359118	-4590	+	NM_014337 NM_148175 NM_148176 TSC_hg19_v1_chr22_+_22020298 AF320072 AK289545 BC000022 U37219 AK127259 BC028385 AK299206 CR456548 DQ891659 DQ894846 AB463162 CU013148 CU013436 CU673996 CU688484	19165	+	BC034486 BC074501 TSC_hg19_v1_chr22_-_22090057 BC048303 NM_013313 AB098734 AB098735	88884	-	TSC_hg19_v1_chr22_-_22221936 DQ399292 AB384931 EU176323 EU831429 EU831522 AK307615 Z11694 AK090869 BC099905	220665	-	CR456570|SDF2L1|23753|stromal cell-derived factor 2-like 1##AF277316|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC139837|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013169|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013457|SDF2L1|23753|stromal cell-derived factor 2-like 1##AB043007|SDF2L1|23753|stromal cell-derived factor 2-like 1##AY359118|SDF2L1|23753|stromal cell-derived factor 2-like 1##NM_014337|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148175|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148176|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AF320072|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK289545|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC000022|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##U37219|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK127259|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC028385|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK299206|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456548|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ891659|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ894846|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013148|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013436|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC034486|YPEL1|29799|yippee-like 1 (Drosophila)##BC074501|YPEL1|29799|yippee-like 1 (Drosophila)##BC048303|YPEL1|29799|yippee-like 1 (Drosophila)##NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)##AB098734|YPEL1|29799|yippee-like 1 (Drosophila)##AB098735|YPEL1|29799|yippee-like 1 (Drosophila)##DQ399292|MAPK1|5594|mitogen-activated protein kinase 1##EU176323|MAPK1|5594|mitogen-activated protein kinase 1##EU831429|MAPK1|5594|mitogen-activated protein kinase 1##EU831522|MAPK1|5594|mitogen-activated protein kinase 1##AK307615|MAPK1|5594|mitogen-activated protein kinase 1##Z11694|MAPK1|5594|mitogen-activated protein kinase 1##AK090869|MAPK1|5594|mitogen-activated protein kinase 1##BC099905|MAPK1|5594|mitogen-activated protein kinase 1	0.572511	CTCF.p2:18:0.573
chr3	71924669	71924793	reg1006313.p1	12.260	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-90460	-	AK313656 NM_173359	-120808	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-121209	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	972817	-	BC017274 TSC_hg19_v1_chr3_-_72897575	972844	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	972861	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.995164	CTCF.p2:-5:0.995
chr6	43635091	43635219	reg1007503.p1	12.260	+	NM_001193341 NM_152732 AK291399 BC029519 AK055407	-22359	+	TSC_hg19_v1_chr6_+_43603603 BC002904 D14811 AB384438 CR456893 CU678282	-31555	+	TSC_hg19_v1_chr6_+_43603585 AK297172 NM_014628	-31586	+	TSC_hg19_v1_chr6_-_43655521 CU679679 DQ884400 AK300757 BC010364 AK307183 AB049952	20364	-	TSC_hg19_v1_chr6_-_43655539 NM_001193343 NM_018135	20393	-	TSC_hg19_v1_chr6_+_43737947 NM_001025366 NM_001025367 NM_001025368 NM_001025369 NM_001025370 NM_001033756 NM_001171622 NM_001171623 NM_001171624 NM_001171625 NM_001171626 NM_001171627 NM_001171628 NM_001171629 NM_001171630 NM_001204384 NM_001204385 NM_003376 BC058855 BC019867	102863	+	NM_001193341|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##NM_152732|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##AK291399|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##BC029519|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##AK055407|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##BC002904|MAD2L1BP|9587|MAD2L1 binding protein##D14811|MAD2L1BP|9587|MAD2L1 binding protein##CR456893|MAD2L1BP|9587|MAD2L1 binding protein##AK297172|MAD2L1BP|9587|MAD2L1 binding protein##NM_014628|MAD2L1BP|9587|MAD2L1 binding protein##DQ884400|MRPS18A|55168|mitochondrial ribosomal protein S18A##AK300757|MRPS18A|55168|mitochondrial ribosomal protein S18A##BC010364|MRPS18A|55168|mitochondrial ribosomal protein S18A##AK307183|MRPS18A|55168|mitochondrial ribosomal protein S18A##AB049952|MRPS18A|55168|mitochondrial ribosomal protein S18A##NM_001193343|MRPS18A|55168|mitochondrial ribosomal protein S18A##NM_018135|MRPS18A|55168|mitochondrial ribosomal protein S18A##NM_001025366|VEGFA|7422|vascular endothelial growth factor A##NM_001025367|VEGFA|7422|vascular endothelial growth factor A##NM_001025368|VEGFA|7422|vascular endothelial growth factor A##NM_001025369|VEGFA|7422|vascular endothelial growth factor A##NM_001025370|VEGFA|7422|vascular endothelial growth factor A##NM_001033756|VEGFA|7422|vascular endothelial growth factor A##NM_001171622|VEGFA|7422|vascular endothelial growth factor A##NM_001171623|VEGFA|7422|vascular endothelial growth factor A##NM_001171624|VEGFA|7422|vascular endothelial growth factor A##NM_001171625|VEGFA|7422|vascular endothelial growth factor A##NM_001171626|VEGFA|7422|vascular endothelial growth factor A##NM_001171627|VEGFA|7422|vascular endothelial growth factor A##NM_001171628|VEGFA|7422|vascular endothelial growth factor A##NM_001171629|VEGFA|7422|vascular endothelial growth factor A##NM_001171630|VEGFA|7422|vascular endothelial growth factor A##NM_001204384|VEGFA|7422|vascular endothelial growth factor A##NM_001204385|VEGFA|7422|vascular endothelial growth factor A##NM_003376|VEGFA|7422|vascular endothelial growth factor A##BC058855|VEGFA|7422|vascular endothelial growth factor A##BC019867|VEGFA|7422|vascular endothelial growth factor A	0.945934	CTCF.p2:-9:0.946
chr1	203141454	203141581	reg1007564.p1	12.259	+	TSC_hg19_v1_chr1_+_203097427 AK295584 AK308733 AK293647 AK316106	-44072	+	AK289928 NM_000674 NM_001048230 AK095060 BC026340	-44670	+	NM_002479	-86141	-	L05606 BC044226 NM_004997 TSC_hg19_v1_chr1_-_203144955	3415	-	AB209459 TSC_hg19_v1_chr1_-_203154361	12817	-	TSC_hg19_v1_chr1_-_203155807 BT007223 CU678995 DQ890777 DQ893937 EU831608 EU831695 BC038354	14260	-	AK295584|ADORA1|134|adenosine A1 receptor##AK308733|ADORA1|134|adenosine A1 receptor##AK289928|ADORA1|134|adenosine A1 receptor##NM_000674|ADORA1|134|adenosine A1 receptor##NM_001048230|ADORA1|134|adenosine A1 receptor##AK095060|ADORA1|134|adenosine A1 receptor##BC026340|ADORA1|134|adenosine A1 receptor##NM_002479|MYOG|4656|myogenin (myogenic factor 4)##L05606|MYBPH|4608|myosin binding protein H##BC044226|MYBPH|4608|myosin binding protein H##NM_004997|MYBPH|4608|myosin binding protein H##AB209459|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BT007223|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ890777|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ893937|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##EU831608|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##EU831695|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC038354|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	0.875452	CTCF.p2:5:0.875
chr17	9869076	9869194	reg1006698.p2	12.259	+	AJ224876 NM_003644 AK293834 AK315162	-6364	-	AB001838 BT009838 AB528320 DQ892822 DQ896068 BC001720 S62028 S45545 AB593156 NM_002903 S43855	-60546	-	TSC_hg19_v1_chr17_+_9745847 BC041176 BC019818	-123276	+	AB385324 BT006891 DQ892802 DQ895910 CU674584 AB209030 AK294829 TSC_hg19_v1_chr17_-_9923322	54128	-	TSC_hg19_v1_chr17_-_9923331 AK309722	54257	-	TSC_hg19_v1_chr17_-_9929603 AB007854 AK225165 AK299574 NM_001130831	60486	-	AJ224876|GAS7|8522|growth arrest-specific 7##NM_003644|GAS7|8522|growth arrest-specific 7##AK293834|GAS7|8522|growth arrest-specific 7##AK315162|GAS7|8522|growth arrest-specific 7##AB001838|RCVRN|5957|recoverin##BT009838|RCVRN|5957|recoverin##DQ892822|RCVRN|5957|recoverin##DQ896068|RCVRN|5957|recoverin##BC001720|RCVRN|5957|recoverin##S62028|RCVRN|5957|recoverin##S45545|RCVRN|5957|recoverin##AB593156|RCVRN|5957|recoverin##NM_002903|RCVRN|5957|recoverin##S43855|RCVRN|5957|recoverin##BC041176|GLP2R|9340|glucagon-like peptide 2 receptor##BC019818|GLP2R|9340|glucagon-like peptide 2 receptor##BT006891|GAS7|8522|growth arrest-specific 7##DQ892802|GAS7|8522|growth arrest-specific 7##DQ895910|GAS7|8522|growth arrest-specific 7##AB209030|GAS7|8522|growth arrest-specific 7##AK294829|GAS7|8522|growth arrest-specific 7##AK309722|GAS7|8522|growth arrest-specific 7##AB007854|GAS7|8522|growth arrest-specific 7##AK225165|GAS7|8522|growth arrest-specific 7##AK299574|GAS7|8522|growth arrest-specific 7##NM_001130831|GAS7|8522|growth arrest-specific 7	0.937045	CTCF.p2:-17:0.937
chr9	92861715	92861865	reg1007311.p1	12.259	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-641809	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-748783	-	BC054500 NM_001142287 NM_006378	-767180	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	543329	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	702246	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	702277	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.0	
chr17	3817258	3817377	reg1007177.p1	12.258	+	AL136576 NM_032294 NM_172207 TSC_hg19_v1_chr17_-_3796348	-20974	-	BC031647 TSC_hg19_v1_chr17_-_3796278 AF425232 BC043487	-21026	-	AF425301 NM_172206	-23281	-	X83688 U45448 BC044657 BC027949 TSC_hg19_v1_chr17_-_3819762 AK310981 AK313264 AF020498	2431	-	NM_002558	2642	-	AB462957 DQ893317 EU176809 Z69881 TSC_hg19_v1_chr17_-_3867744 AF068220 BC035729 AK292716 NM_005173 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958	50384	-	AL136576|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_032294|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_172207|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##BC031647|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##AF425232|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##BC043487|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##AF425301|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_172206|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##X83688|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##U45448|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC044657|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC027949|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AK313264|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AF020498|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##NM_002558|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	0.83555	CTCF.p2:-8:0.497	CTCF.p2:99:0.338
chr6	108371174	108371309	reg1008067.p1	12.258	+	TSC_hg19_v1_chr6_-_108279413 NM_007214	-91795	-	TSC_hg19_v1_chr6_-_108279378 BC023598	-91849	-	TSC_hg19_v1_chr6_-_108279366 BC009066	-91872	-	TSC_hg19_v1_chr6_-_108395868 AK075012	24622	-	TSC_hg19_v1_chr6_-_108395920 BC068581	24679	-	TSC_hg19_v1_chr6_-_108395924 AF533891 AY358795 BC059412 AK129854	24689	-	NM_007214|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC023598|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC009066|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK075012|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC068581|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AF533891|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AY358795|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC059412|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AK129854|OSTM1|28962|osteopetrosis associated transmembrane protein 1	0.990311	CTCF.p2:12:0.990
chr9	139519628	139519710	reg1013137.p2	12.258	+	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	-79419	-	TSC_hg19_v1_chr9_-_139378220 AB593115	-141427	-	BC036221 NM_152571 AK055336	-141699	+	NM_016215 AL512735 AY358903 BC088371 AY358902	37732	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	40546	+	BC012377 TSC_hg19_v1_chr9_+_139560248	40602	+	AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7##BC012377|EGFL7|51162|EGF-like-domain, multiple 7	0.510875	CTCF.p2:9:0.511
chr11	8054840	8054949	reg1006535.p1	12.256	+	AK293528 TSC_hg19_v1_chr11_+_8040820	-14089	+	NM_003754 TSC_hg19_v1_chr11_+_8008883 AK095574 AK289637 AK297621 AK291354 AK293826 BC000490 U94855 BC073753 AB590115 BT006894 CR456959 CU674238 DQ890766	-46012	+	AY154465 AY489192 NM_176821 BC104957	-69806	-	NM_003320 U82467	5285	+	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	47905	+	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	135669	-	AK293528|TUB|7275|tubby homolog (mouse)##NM_003754|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK095574|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK289637|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK297621|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK291354|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK293826|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##BC000490|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##U94855|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##BC073753|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##BT006894|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##CR456959|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##DQ890766|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AY154465|NLRP10|338322|NLR family, pyrin domain containing 10##AY489192|NLRP10|338322|NLR family, pyrin domain containing 10##NM_176821|NLRP10|338322|NLR family, pyrin domain containing 10##BC104957|NLRP10|338322|NLR family, pyrin domain containing 10##NM_003320|TUB|7275|tubby homolog (mouse)##U82467|TUB|7275|tubby homolog (mouse)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	1.016604	CTCF.p2:0:0.998
chr19	13204701	13204827	reg1006480.p1	12.256	+	HQ258405 TSC_hg19_v1_chr19_+_13135832 FJ861276 U07811	-68930	+	TSC_hg19_v1_chr19_+_13135745 L31881 BC117113 BC117115	-69004	+	TSC_hg19_v1_chr19_+_13135426 BX537794 AK295290	-69367	+	TSC_hg19_v1_chr19_+_13205957 BC036885	1226	+	TSC_hg19_v1_chr19_-_13213530 AK311530 M22637	8762	-	TSC_hg19_v1_chr19_-_13213673 BC002796	8933	-	HQ258405|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##FJ861276|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U07811|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC036885|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##M22637|LYL1|4066|lymphoblastic leukemia derived sequence 1##BC002796|LYL1|4066|lymphoblastic leukemia derived sequence 1	0.999764	CTCF.p2:14:1.000
chr3	14962755	14962898	reg1008145.p1	12.254	+	NM_152536	-102358	+	NM_001184957 NM_001184958 NM_032137 AK131481 BC030599 AL834386 AL136781 BC038406	-246181	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	-269543	+	TSC_hg19_v1_chr3_-_14988966 BC014104 BC063441 BC039246	26130	-	TSC_hg19_v1_chr3_-_14989000 AK055924	26211	-	TSC_hg19_v1_chr3_+_14989089 AK290590 L27586 NM_003298	26329	+	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5##NM_001184957|C3orf20|84077|chromosome 3 open reading frame 20##NM_001184958|C3orf20|84077|chromosome 3 open reading frame 20##NM_032137|C3orf20|84077|chromosome 3 open reading frame 20##AK131481|C3orf20|84077|chromosome 3 open reading frame 20##BC030599|C3orf20|84077|chromosome 3 open reading frame 20##AL834386|C3orf20|84077|chromosome 3 open reading frame 20##AL136781|C3orf20|84077|chromosome 3 open reading frame 20##BC038406|C3orf20|84077|chromosome 3 open reading frame 20##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19##BC014104|LOC100505641|100505641|uncharacterized LOC100505641##BC063441|LOC100505641|100505641|uncharacterized LOC100505641##BC039246|LOC100505641|100505641|uncharacterized LOC100505641##AK055924|LOC100505641|100505641|uncharacterized LOC100505641##AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2##L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2##NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	0.539752	CTCF.p2:10:0.540
chr5	53715611	53715737	reg1005743.p2	12.254	+	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	-109272	-	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	-109349	-	TSC_hg19_v1_chr5_+_52856474 AF020351 AK307973 CU675075	-859188	+	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	35850	+	TSC_hg19_v1_chr5_+_53813588 AK304195 NM_001145427 BC060791 BC067860 NM_001102575 NM_052870	97871	+	TSC_hg19_v1_chr5_+_53813656 BC117218 BC117220	97999	+	AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AF020351|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK307973|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3##AK304195|SNX18|112574|sorting nexin 18##NM_001145427|SNX18|112574|sorting nexin 18##BC060791|SNX18|112574|sorting nexin 18##BC067860|SNX18|112574|sorting nexin 18##NM_001102575|SNX18|112574|sorting nexin 18##NM_052870|SNX18|112574|sorting nexin 18##BC117218|SNX18|112574|sorting nexin 18##BC117220|SNX18|112574|sorting nexin 18	0.999831	CTCF.p2:1:1.000
chr6	13538441	13538592	reg1008230.p1	12.254	+	TSC_hg19_v1_chr6_-_13487810 AK000337 NM_001242629 NM_018988	-50658	-	TSC_hg19_v1_chr6_-_13487051 BC148295 BC119005 BC124557	-51419	-	AK055131 AF264036 NM_001242628	-52118	-	TSC_hg19_v1_chr6_+_13574830 NM_001193267 NM_001242827 NM_031244 BX538030 AK302467 AK000355 AK294162 AJ420496 NM_012241 BC000126 AF083110	36327	+	BC064478 TSC_hg19_v1_chr6_-_13615415	76887	-	TSC_hg19_v1_chr6_+_13615570 AF172066 NM_016167 BC062683 AK075301 BC023517 CU692792	77084	+	AK000337|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242629|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_018988|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC148295|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC119005|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC124557|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AK055131|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF264036|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242628|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001193267|SIRT5|23408|sirtuin 5##NM_001242827|SIRT5|23408|sirtuin 5##NM_031244|SIRT5|23408|sirtuin 5##BX538030|SIRT5|23408|sirtuin 5##AK302467|SIRT5|23408|sirtuin 5##AK000355|SIRT5|23408|sirtuin 5##AK294162|SIRT5|23408|sirtuin 5##AJ420496|SIRT5|23408|sirtuin 5##NM_012241|SIRT5|23408|sirtuin 5##BC000126|SIRT5|23408|sirtuin 5##AF083110|SIRT5|23408|sirtuin 5##AF172066|NOL7|51406|nucleolar protein 7, 27kDa##NM_016167|NOL7|51406|nucleolar protein 7, 27kDa##BC062683|NOL7|51406|nucleolar protein 7, 27kDa##AK075301|NOL7|51406|nucleolar protein 7, 27kDa##BC023517|NOL7|51406|nucleolar protein 7, 27kDa	0.374615	CTCF.p2:-8:0.375
chr19	10369811	10369948	reg1007752.p1	12.252	+	TSC_hg19_v1_chr19_+_10362916 AB049635 AY007152	-6887	+	TSC_hg19_v1_chr19_+_10362889 BC009858	-6981	+	TSC_hg19_v1_chr19_+_10362680 NM_015956 NM_146387 NM_146388 AF132962 BC000756	-7232	+	NM_000201	11637	+	M24283 BC015969 AK301412 J03132 TSC_hg19_v1_chr19_+_10381795 AK130659 AK312636 AK298054 AK298983 X06990 AB590404 AF340038 BT006854 AF340039	11926	+	BC029364 NM_001039132 NM_001544 NM_022377 BC000046 L27670 L27671 S78852 DQ892650 DQ895889 BT009816	27786	+	AB049635|MRPL4|51073|mitochondrial ribosomal protein L4##AY007152|MRPL4|51073|mitochondrial ribosomal protein L4##BC009858|MRPL4|51073|mitochondrial ribosomal protein L4##NM_015956|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146387|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146388|MRPL4|51073|mitochondrial ribosomal protein L4##AF132962|MRPL4|51073|mitochondrial ribosomal protein L4##BC000756|MRPL4|51073|mitochondrial ribosomal protein L4##NM_000201|ICAM1|3383|intercellular adhesion molecule 1##M24283|ICAM1|3383|intercellular adhesion molecule 1##BC015969|ICAM1|3383|intercellular adhesion molecule 1##AK301412|ICAM1|3383|intercellular adhesion molecule 1##J03132|ICAM1|3383|intercellular adhesion molecule 1##AK130659|ICAM1|3383|intercellular adhesion molecule 1##AK312636|ICAM1|3383|intercellular adhesion molecule 1##AK298054|ICAM1|3383|intercellular adhesion molecule 1##AK298983|ICAM1|3383|intercellular adhesion molecule 1##X06990|ICAM1|3383|intercellular adhesion molecule 1##AF340038|ICAM1|3383|intercellular adhesion molecule 1##BT006854|ICAM1|3383|intercellular adhesion molecule 1##AF340039|ICAM1|3383|intercellular adhesion molecule 1##BC029364|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##NM_001039132|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##NM_001544|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##NM_022377|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##BC000046|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##L27670|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##L27671|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##S78852|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##DQ892650|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##DQ895889|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)##BT009816|ICAM4|3386|intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)	0.99194	CTCF.p2:-25:0.992
chr5	179755765	179755912	reg1006693.p1	12.252	+	TSC_hg19_v1_chr5_-_179719061 NM_001135044 NM_002752 NM_139068 NM_139069 NM_139070	-36762	-	TSC_hg19_v1_chr5_-_179718968 AK289638	-36871	-	TSC_hg19_v1_chr5_-_179636160 NM_175062 BC036802	-119662	-	AB016789 NM_005110 BC000012 TSC_hg19_v1_chr5_-_179780333 AK022507 AK314551	24487	-	TSC_hg19_v1_chr5_+_179921385 NM_015455	165555	+	TSC_hg19_v1_chr5_+_179921452 AB033020 BC152469	165620	+	NM_001135044|MAPK9|5601|mitogen-activated protein kinase 9##NM_002752|MAPK9|5601|mitogen-activated protein kinase 9##NM_139068|MAPK9|5601|mitogen-activated protein kinase 9##NM_139069|MAPK9|5601|mitogen-activated protein kinase 9##NM_139070|MAPK9|5601|mitogen-activated protein kinase 9##AK289638|MAPK9|5601|mitogen-activated protein kinase 9##NM_175062|RASGEF1C|255426|RasGEF domain family, member 1C##BC036802|RASGEF1C|255426|RasGEF domain family, member 1C##AB016789|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##NM_005110|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##BC000012|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##AK022507|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##AK314551|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##NM_015455|CNOT6|57472|CCR4-NOT transcription complex, subunit 6##AB033020|CNOT6|57472|CCR4-NOT transcription complex, subunit 6##BC152469|CNOT6|57472|CCR4-NOT transcription complex, subunit 6	0.9196	CTCF.p2:4:0.920
chr12	13814354	13814470	reg1008156.p1	12.251	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-464683	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-464695	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-464774	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	318574	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	704223	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	723860	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.157501	
chr15	38682251	38682375	reg1007116.p1	12.250	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	-137291	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	-137918	+	BC029221 NM_152453	-454857	+	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	64032	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	174618	-	AK093014 AX747856 BC119016 BC119810 NM_207444	306485	+	NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53	0.432567	CTCF.p2:9:0.433
chr17_ctg5_hap1	957785	957884	reg1006722.p1	12.250	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.915446	CTCF.p2:2:0.915
chr2	138705437	138705564	reg1007664.p1	12.250	+	NM_001080427	-957039	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-1182384	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-1829824	-	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	16434	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	553893	+	TSC_hg19_v1_chr2_+_139259500 AK021919	553990	+	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like	0.998687	CTCF.p2:3:0.999
chr9	3732733	3732868	reg1005875.p2	12.250	+	TSC_hg19_v1_chr9_+_3526079 AK125504	-206712	+	TSC_hg19_v1_chr9_-_3525983 BC022191 NM_002919 NM_134428	-206796	-	TSC_hg19_v1_chr9_-_3525889 AK310956 AK289540	-206961	-	BC033899 NM_152629	419382	-	TSC_hg19_v1_chr9_-_4299574 DQ438882 DQ438887 DQ438892 DQ438899 DQ438902	566783	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	567163	-	BC022191|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_002919|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_134428|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK310956|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK289540|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##BC033899|GLIS3|169792|GLIS family zinc finger 3##NM_152629|GLIS3|169792|GLIS family zinc finger 3##DQ438882|GLIS3|169792|GLIS family zinc finger 3##DQ438887|GLIS3|169792|GLIS family zinc finger 3##DQ438892|GLIS3|169792|GLIS family zinc finger 3##DQ438899|GLIS3|169792|GLIS family zinc finger 3##DQ438902|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3	0.146318	
chr2	122160000	122160129	reg1005797.p2	12.249	+	TSC_hg19_v1_chr2_-_122159142 CR749627	-909	-	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	-117291	-	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	-605171	+	AK297259 TSC_hg19_v1_chr2_-_122247924	87855	-	TSC_hg19_v1_chr2_-_122407024 BC112940 AK091140 AX746802 BC132723 BC144107 AK299331 AJ288057 NM_001142273 NM_001142274 NM_001207051 NM_015282	246958	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	247581	+	CR749627|CLASP1|23332|cytoplasmic linker associated protein 1##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##AK297259|CLASP1|23332|cytoplasmic linker associated protein 1##BC112940|CLASP1|23332|cytoplasmic linker associated protein 1##AK091140|CLASP1|23332|cytoplasmic linker associated protein 1##BC132723|CLASP1|23332|cytoplasmic linker associated protein 1##BC144107|CLASP1|23332|cytoplasmic linker associated protein 1##AK299331|CLASP1|23332|cytoplasmic linker associated protein 1##AJ288057|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142273|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142274|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001207051|CLASP1|23332|cytoplasmic linker associated protein 1##NM_015282|CLASP1|23332|cytoplasmic linker associated protein 1##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128	0.109774	
chr12	54762539	54762680	reg1008076.p1	12.248	+	AF237762 AF282693 TSC_hg19_v1_chr12_-_54758271 BC020614 NM_020370 AK290394	-4359	-	TSC_hg19_v1_chr12_+_54718927 AK223188 BC002849 AB463530 CU678240	-43672	+	TSC_hg19_v1_chr12_+_54718925 AB047848 AF086911	-43684	+	AB528580 CR457327 TSC_hg19_v1_chr12_-_54778374	15727	-	AK296564 TSC_hg19_v1_chr12_-_54778485 AF304052 NM_015481	15865	-	AB593085 TSC_hg19_v1_chr12_-_54779552 AK092724 AY461717	16925	-	AF237762|GPR84|53831|G protein-coupled receptor 84##AF282693|GPR84|53831|G protein-coupled receptor 84##BC020614|GPR84|53831|G protein-coupled receptor 84##NM_020370|GPR84|53831|G protein-coupled receptor 84##AK290394|GPR84|53831|G protein-coupled receptor 84##AK223188|COPZ1|22818|coatomer protein complex, subunit zeta 1##BC002849|COPZ1|22818|coatomer protein complex, subunit zeta 1##AB047848|COPZ1|22818|coatomer protein complex, subunit zeta 1##AF086911|COPZ1|22818|coatomer protein complex, subunit zeta 1##CR457327|ZNF385A|25946|zinc finger protein 385A##AK296564|ZNF385A|25946|zinc finger protein 385A##AF304052|ZNF385A|25946|zinc finger protein 385A##NM_015481|ZNF385A|25946|zinc finger protein 385A##AB593085|ZNF385A|25946|zinc finger protein 385A##AK092724|ZNF385A|25946|zinc finger protein 385A##AY461717|ZNF385A|25946|zinc finger protein 385A	0.344698	CTCF.p2:20:0.345
chr15	35212553	35212674	reg1006521.p2	12.248	+	AK129892 AK056592 AK129902 AK290616 TSC_hg19_v1_chr15_-_35087751 BC009978 NM_005159	-124776	-	BC069131 BC069339 NM_020660 BC112110 BC112114 BC143788	-165879	-	BX647673 TSC_hg19_v1_chr15_-_34875067	-337544	-	AB384497 AK291615 BC127111 BC127112 TSC_hg19_v1_chr15_-_35261899 AB011132 AK315815 BX647820 EF553519 NM_014691	49314	-	TSC_hg19_v1_chr15_-_35280489 BC071603 AK291438	67841	-	NM_014106 TSC_hg19_v1_chr15_-_35280498	67899	-	AK129892|ACTC1|70|actin, alpha, cardiac muscle 1##AK056592|ACTC1|70|actin, alpha, cardiac muscle 1##AK129902|ACTC1|70|actin, alpha, cardiac muscle 1##AK290616|ACTC1|70|actin, alpha, cardiac muscle 1##BC009978|ACTC1|70|actin, alpha, cardiac muscle 1##NM_005159|ACTC1|70|actin, alpha, cardiac muscle 1##BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa##BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa##NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa##BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa##BX647673|GOLGA8B|440270|golgin A8 family, member B##AK291615|AQR|9716|aquarius homolog (mouse)##BC127111|AQR|9716|aquarius homolog (mouse)##BC127112|AQR|9716|aquarius homolog (mouse)##AB011132|AQR|9716|aquarius homolog (mouse)##AK315815|AQR|9716|aquarius homolog (mouse)##BX647820|AQR|9716|aquarius homolog (mouse)##EF553519|AQR|9716|aquarius homolog (mouse)##NM_014691|AQR|9716|aquarius homolog (mouse)##BC071603|ZNF770|54989|zinc finger protein 770##AK291438|ZNF770|54989|zinc finger protein 770##NM_014106|ZNF770|54989|zinc finger protein 770	0.961238	CTCF.p2:4:0.961
chr15	77265809	77265943	reg1007574.p1	12.246	+	TSC_hg19_v1_chr15_+_77224095 NM_002902 AK313833 X78669 BC004892 BT009790 CU678788	-41804	+	AB040887 TSC_hg19_v1_chr15_-_77197781 AK056095	-68105	-	TSC_hg19_v1_chr15_-_77197682 BC070197 BC107415 AK056515	-68212	-	TSC_hg19_v1_chr15_+_77287465 AK309856 NM_003978 AK310126 BC008602	21614	+	AK304052 U94778 AK316220 TSC_hg19_v1_chr15_+_77287720 AK298733	21830	+	TSC_hg19_v1_chr15_+_77287743 AK310072 AB451310 AB451440 AF038602 AF038603 DQ891779 DQ894963 AB528365	21951	+	NM_002902|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##AK313833|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##X78669|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##BC004892|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##BT009790|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##AB040887|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056095|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC070197|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC107415|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056515|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310072|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451310|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451440|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038603|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ891779|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ894963|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	0.024226	
chr2	233304313	233304432	reg1005800.p1	12.246	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	-32796	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	-60989	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-478012	+	AK313163 NM_001631 BC132678 M31008 M15694	16498	+	AB030579 Y16187 AY358923 NM_004826 BC050453	48161	-	NM_001195129	80800	+	NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal##AB030579|ECEL1|9427|endothelin converting enzyme-like 1##Y16187|ECEL1|9427|endothelin converting enzyme-like 1##AY358923|ECEL1|9427|endothelin converting enzyme-like 1##NM_004826|ECEL1|9427|endothelin converting enzyme-like 1##BC050453|ECEL1|9427|endothelin converting enzyme-like 1##NM_001195129|PRSS56|646960|protease, serine, 56	0.999292	CTCF.p2:-1:0.999
chr3	178733419	178733569	reg1007674.p1	12.246	+	AF209747 NM_005832	-456942	+	BC017825 NM_181361	-479271	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1818435	-	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	56071	-	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	56132	-	TSC_hg19_v1_chr3_+_178866144 NM_006218 AK292940	132744	+	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3##NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	1.009731	CTCF.p2:5:0.996
chr4	167013178	167013313	reg1007265.p1	12.246	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-218791	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-713088	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-764390	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	1142366	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	1142459	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	1142495	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.96427	CTCF.p2:2:0.964
chr10	64976985	64977103	reg1005709.p1	12.245	+	TSC_hg19_v1_chr10_+_64893098 AF267866 AK301656 AK225257 AK225256 AY267839 AY267840 BC011707 AB590768 EU832288 EU832373	-83898	+	TSC_hg19_v1_chr10_+_64893044 NM_030759 AK054957 AL136656	-84013	+	AK312813 NM_001136178	-398118	-	BC126403 BC143722 TSC_hg19_v1_chr10_-_65029004 BX537954 NM_004241 BC108649	51871	-	TSC_hg19_v1_chr10_+_65224979 BC007866 AK314171	247940	+	AK027280 EF068222 NM_032776 TSC_hg19_v1_chr10_-_65225738	248634	-	AF267866|NRBF2|29982|nuclear receptor binding factor 2##AK301656|NRBF2|29982|nuclear receptor binding factor 2##AK225257|NRBF2|29982|nuclear receptor binding factor 2##AK225256|NRBF2|29982|nuclear receptor binding factor 2##AY267839|NRBF2|29982|nuclear receptor binding factor 2##AY267840|NRBF2|29982|nuclear receptor binding factor 2##BC011707|NRBF2|29982|nuclear receptor binding factor 2##EU832288|NRBF2|29982|nuclear receptor binding factor 2##EU832373|NRBF2|29982|nuclear receptor binding factor 2##NM_030759|NRBF2|29982|nuclear receptor binding factor 2##AK054957|NRBF2|29982|nuclear receptor binding factor 2##AL136656|NRBF2|29982|nuclear receptor binding factor 2##AK312813|EGR2|1959|early growth response 2##NM_001136178|EGR2|1959|early growth response 2##BC126403|JMJD1C|221037|jumonji domain containing 1C##BC143722|JMJD1C|221037|jumonji domain containing 1C##BX537954|JMJD1C|221037|jumonji domain containing 1C##NM_004241|JMJD1C|221037|jumonji domain containing 1C##BC108649|JMJD1C|221037|jumonji domain containing 1C##BC007866|LOC84989|84989|uncharacterized LOC84989##AK314171|LOC84989|84989|uncharacterized LOC84989##AK027280|JMJD1C|221037|jumonji domain containing 1C##EF068222|JMJD1C|221037|jumonji domain containing 1C##NM_032776|JMJD1C|221037|jumonji domain containing 1C	0.571287	CTCF.p2:-7:0.571
chr1	3341385	3341491	reg1004352.p2	12.245	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	-355662	+	NM_080431 AK058153 AK314500 BC029499	-403383	+	NM_001242672	-635209	-	TSC_hg19_v1_chr1_+_3371228 NM_014448 AK095984	29767	+	AK310408 TSC_hg19_v1_chr1_+_3388187 AK296150	46746	+	TSC_hg19_v1_chr1_-_3447976 AB011539	106554	-	NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16##NM_080431|ACTRT2|140625|actin-related protein T2##AK058153|ACTRT2|140625|actin-related protein T2##AK314500|ACTRT2|140625|actin-related protein T2##BC029499|ACTRT2|140625|actin-related protein T2##NM_001242672|TTC34|100287898|tetratricopeptide repeat domain 34##NM_014448|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK095984|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK310408|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK296150|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AB011539|MEGF6|1953|multiple EGF-like-domains 6	1.347674	CTCF.p2:4:0.995	CTCF.p2:86:0.353
chr12	93419369	93419514	reg1007937.p1	12.244	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-96343	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-96398	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	-96503	-	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	352451	+	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	416245	-	TSC_hg19_v1_chr12_-_93835718 D83004	416277	-	NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.133207	
chr3	135797766	135797897	reg1007639.p1	12.244	+	NM_181897 AK316258 L12146	-56213	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	-113211	+	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	-113300	+	AK302491 NM_001145417	115461	-	TSC_hg19_v1_chr3_-_135914658 AK091956 NM_018133	116850	-	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	171333	+	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK302491|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_001145417|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##AK091956|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_018133|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide	0.041962	
chr8	42177284	42177412	reg1006059.p2	12.244	+	BC090865 TSC_hg19_v1_chr8_+_42128868 AF080158 AK298241 AB209090 BC108694 AK290952 BC144080 BX648165	-48433	+	TSC_hg19_v1_chr8_+_42128835 AK302723 AK303294 AK316418 BC006231 AK091297 AK309052	-48513	+	TSC_hg19_v1_chr8_+_42128832 AK303528	-48521	+	NM_002690 AK223537 TSC_hg19_v1_chr8_+_42196014 BC100288 AK294025 AK314976 D29013 M13140 BC106909 AB464039 CR536503 CR541802 L11607	18709	+	AB017788 BC107046 BC107047 AF177397 NM_014420 AK311714 AK301609	57304	-	NM_001135694 NM_005662 TSC_hg19_v1_chr8_+_42249355	71970	+	BC090865|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AF080158|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK298241|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AB209090|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC108694|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK290952|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC144080|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BX648165|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK302723|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK303294|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK316418|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC006231|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK091297|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK303528|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_002690|POLB|5423|polymerase (DNA directed), beta##AK223537|POLB|5423|polymerase (DNA directed), beta##BC100288|POLB|5423|polymerase (DNA directed), beta##AK294025|POLB|5423|polymerase (DNA directed), beta##AK314976|POLB|5423|polymerase (DNA directed), beta##D29013|POLB|5423|polymerase (DNA directed), beta##M13140|POLB|5423|polymerase (DNA directed), beta##BC106909|POLB|5423|polymerase (DNA directed), beta##CR536503|POLB|5423|polymerase (DNA directed), beta##CR541802|POLB|5423|polymerase (DNA directed), beta##L11607|POLB|5423|polymerase (DNA directed), beta##AB017788|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##BC107046|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##BC107047|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##AF177397|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##NM_014420|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##AK301609|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##NM_001135694|VDAC3|7419|voltage-dependent anion channel 3##NM_005662|VDAC3|7419|voltage-dependent anion channel 3	0.0	
chr10	64004884	64005007	reg1006048.p2	12.243	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	-195849	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-343514	+	NM_032199	-343933	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	23594	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	129098	+	AJ505150 NM_199452	275261	+	BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365	0.993289	CTCF.p2:18:0.993
chr11	12621175	12621296	reg1007154.p1	12.243	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	-222126	+	AK123671 NM_032867	-312789	+	TSC_hg19_v1_chr11_+_12132122 BC044577 NM_014632 BC015755 AB018293	-489105	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	74728	+	TSC_hg19_v1_chr11_+_12960793 AK075236	339576	+	TSC_hg19_v1_chr11_+_13030883 NM_001080521	409689	+	NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha##AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##BC044577|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_014632|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##BC015755|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB018293|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_001080521|RASSF10|644943|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10	0.767937	CTCF.p2:-1:0.768
chr8	67351279	67351400	reg1005387.p1	12.243	+	NM_144650 AY033237 AK056992 AK300881 BC047492 BC064634 AK293530 AK300243 AK294114 BC110290	-6607	+	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	-10033	+	BC002599 BC011031 AK075431 NM_000756	-260572	-	NM_152765	54151	+	BC032233 NM_001080416 NM_001144755 TSC_hg19_v1_chr8_-_67525502	174135	-	AM392649 AM393766 TSC_hg19_v1_chr8_-_67579266	227892	-	NM_144650|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AY033237|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK056992|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300881|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC047492|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC064634|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK293530|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300243|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK294114|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC110290|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone##NM_152765|C8orf46|254778|chromosome 8 open reading frame 46##BC032233|LOC645895|645895|uncharacterized LOC645895##NM_001080416|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1##NM_001144755|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1##AM392649|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##AM393766|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1	0.995204	CTCF.p2:-13:0.995
chr19	42829386	42829517	reg1005866.p1	12.242	+	TSC_hg19_v1_chr19_+_42817516 NM_173633 AK075286	-11922	+	NM_001145939 TSC_hg19_v1_chr19_-_42806944 NM_001145940	-22510	-	AB528706 CR407626 TSC_hg19_v1_chr19_-_42806760 D63391 BC007863 BC003016 NM_002573	-22791	-	AB011541 BC153880 NM_001410 TSC_hg19_v1_chr19_+_42829786	335	+	BC101197 BC101198 AB049591 AK312080 NM_032488	64980	-	TSC_hg19_v1_chr19_+_42901325 AK311181	71861	+	NM_173633|TMEM145|284339|transmembrane protein 145##AK075286|TMEM145|284339|transmembrane protein 145##NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##AB011541|MEGF8|1954|multiple EGF-like-domains 8##BC153880|MEGF8|1954|multiple EGF-like-domains 8##NM_001410|MEGF8|1954|multiple EGF-like-domains 8##BC101197|CNFN|84518|cornifelin##BC101198|CNFN|84518|cornifelin##AB049591|CNFN|84518|cornifelin##AK312080|CNFN|84518|cornifelin##NM_032488|CNFN|84518|cornifelin	0.711433	CTCF.p2:11:0.711
chr1	85238158	85238265	reg1005667.p2	12.241	+	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-82135	-	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-198105	-	TSC_hg19_v1_chr1_-_84972262 NM_005274	-265942	-	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	120675	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	224497	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	275934	-	AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##NM_005274|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3	0.997365	CTCF.p2:2:0.997
chr3	87820550	87820656	reg1006690.p1	12.241	+	AB587506 L18781 X72215 X62429 D10216 NM_000306 NM_001122757	-494930	-	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	-544068	+	BC094780 TSC_hg19_v1_chr3_-_87040272	-780333	-	NM_000866	211122	+	BC052980 TSC_hg19_v1_chr3_-_88108150 AL117392 NM_001008390 NM_003663	287540	-	AF543494 NM_018293	367658	+	L18781|POU1F1|5449|POU class 1 homeobox 1##X72215|POU1F1|5449|POU class 1 homeobox 1##X62429|POU1F1|5449|POU class 1 homeobox 1##D10216|POU1F1|5449|POU class 1 homeobox 1##NM_000306|POU1F1|5449|POU class 1 homeobox 1##NM_001122757|POU1F1|5449|POU class 1 homeobox 1##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_000866|HTR1F|3355|5-hydroxytryptamine (serotonin) receptor 1F##BC052980|CGGBP1|8545|CGG triplet repeat binding protein 1##AL117392|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_001008390|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_003663|CGGBP1|8545|CGG triplet repeat binding protein 1##AF543494|ZNF654|55279|zinc finger protein 654##NM_018293|ZNF654|55279|zinc finger protein 654	0.985505	CTCF.p2:2:0.986
chr13	113260821	113260931	reg1003062.p2	12.240	+	TSC_hg19_v1_chr13_-_113260770 AK125472	-109	-	TSC_hg19_v1_chr13_-_113242484 AK314785	-18385	-	TSC_hg19_v1_chr13_-_113242468 BC046634 NM_006322	-18403	-	AK129953 NM_207440	40481	+	TSC_hg19_v1_chr13_-_113344130 AK057085	83230	-	TSC_hg19_v1_chr13_+_113344493 NM_015205 NM_032189	83703	+	AK314785|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC046634|TUBGCP3|10426|tubulin, gamma complex associated protein 3##NM_006322|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK129953|C13orf35|400165|chromosome 13 open reading frame 35##NM_207440|C13orf35|400165|chromosome 13 open reading frame 35##AK057085|LOC440149|440149|uncharacterized LOC440149##NM_015205|ATP11A|23250|ATPase, class VI, type 11A##NM_032189|ATP11A|23250|ATPase, class VI, type 11A	0.984462	CTCF.p2:13:0.984
chr4	86339408	86339504	reg1003817.p1	12.240	+	NM_014991	-451913	-	NM_001263 U65887	-835363	+	NM_006168	-920070	-	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	56887	+	TSC_hg19_v1_chr4_+_86699850 NM_001042669	360392	+	BC098580 TSC_hg19_v1_chr4_+_86699865 AK098193	360442	+	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_006168|NKX6-1|4825|NK6 homeobox 1##NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24##NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24##BC098580|ARHGAP24|83478|Rho GTPase activating protein 24##AK098193|ARHGAP24|83478|Rho GTPase activating protein 24	0.828289	CTCF.p2:-8:0.828
chr11	63713421	63713538	reg1005917.p1	12.239	+	TSC_hg19_v1_chr11_+_63706473 NM_024771 AK023910 AK300451 AK303557 JF263566 BC041617 BC052298	-6995	+	TSC_hg19_v1_chr11_-_63684632 AB593132	-28840	-	BC023587 NM_173587	-29164	-	TSC_hg19_v1_chr11_+_63742069 BC063025 NM_004074 BC000501 AK311934 BT009803 CR407687	28604	+	AK098029 NM_017670	39845	+	TSC_hg19_v1_chr11_+_63753896 AK000120	40382	+	NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##JF263566|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AB593132|RCOR2|283248|REST corepressor 2##BC023587|RCOR2|283248|REST corepressor 2##NM_173587|RCOR2|283248|REST corepressor 2##BC063025|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##NM_004074|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##BC000501|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##AK311934|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##BT009803|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##CR407687|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##AK098029|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##NM_017670|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	0.221632	CTCF.p2:6:0.222
chr15	42996729	42996854	reg1008472.p1	12.238	+	TSC_hg19_v1_chr15_+_42867803 CR627426 NM_020759	-128984	+	TSC_hg19_v1_chr15_+_42841055 NM_001130447 NM_018097 AK022939 BC010903 AK001322	-155762	+	TSC_hg19_v1_chr15_-_42840992 AK094891 NM_153260	-155787	-	TSC_hg19_v1_chr15_-_43029313 BC052568 BC066640	32429	-	TSC_hg19_v1_chr15_-_43029327 AF525398 NM_138477	32576	-	AF525400 TSC_hg19_v1_chr15_-_43212975 AK131372 BC041876 NM_173500 BC071556	216191	-	NM_020759|STARD9|57519|StAR-related lipid transfer (START) domain containing 9##NM_001130447|HAUS2|55142|HAUS augmin-like complex, subunit 2##NM_018097|HAUS2|55142|HAUS augmin-like complex, subunit 2##AK022939|HAUS2|55142|HAUS augmin-like complex, subunit 2##BC010903|HAUS2|55142|HAUS augmin-like complex, subunit 2##AK001322|HAUS2|55142|HAUS augmin-like complex, subunit 2##AK094891|LRRC57|255252|leucine rich repeat containing 57##NM_153260|LRRC57|255252|leucine rich repeat containing 57##BC052568|CDAN1|146059|congenital dyserythropoietic anemia, type I##BC066640|CDAN1|146059|congenital dyserythropoietic anemia, type I##AF525398|CDAN1|146059|congenital dyserythropoietic anemia, type I##NM_138477|CDAN1|146059|congenital dyserythropoietic anemia, type I##AF525400|TTBK2|146057|tau tubulin kinase 2##AK131372|TTBK2|146057|tau tubulin kinase 2##BC041876|TTBK2|146057|tau tubulin kinase 2##NM_173500|TTBK2|146057|tau tubulin kinase 2##BC071556|TTBK2|146057|tau tubulin kinase 2	0.387408	CTCF.p2:-10:0.387
chr16	28333190	28333339	reg1006477.p1	12.238	+	TSC_hg19_v1_chr16_+_28303845 AY874862 NM_001024401	-29483	+	TSC_hg19_v1_chr16_-_28303389 AK091456 AX746995	-29886	-	TSC_hg19_v1_chr16_-_28223181 AB002368 NM_015171	-110089	-	DQ891632 DQ894822 AB527254 BC157849 BC071705 AK000739 AK293264 AY762099 TSC_hg19_v1_chr16_-_28415133 BC000533 BC001571	81777	-	AK055366 AK299421 AK303790 AK304500 TSC_hg19_v1_chr16_-_28415162 AK301233 AK301183 NM_001099661 BC107692 NM_001037808 NM_003752	81893	-	BC157842 AK292155 NM_001199142	104454	-	AY874862|SBK1|388228|SH3-binding domain kinase 1##NM_001024401|SBK1|388228|SH3-binding domain kinase 1##AB002368|XPO6|23214|exportin 6##NM_015171|XPO6|23214|exportin 6##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C	1.000026	CTCF.p2:-15:0.935
chr6	43474560	43474688	reg1006849.p1	12.238	+	AK127338 NM_001146017	-17357	+	TSC_hg19_v1_chr6_+_43445324 BC046239	-29276	+	TSC_hg19_v1_chr6_+_43445314 AK024269 AK123398	-29311	+	BC107130 TSC_hg19_v1_chr6_-_43478085 BC108661	3412	-	NM_001012974	3799	-	TSC_hg19_v1_chr6_-_43484665 AL050274 AB463356 AM393648 AM393729 AK021655 AK022757 AK021433 AF162672 AK000946 AK298150 AK308961 BC019297	9973	-	AK127338|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_001146017|TJAP1|93643|tight junction associated protein 1 (peripheral)##BC046239|TJAP1|93643|tight junction associated protein 1 (peripheral)##AK024269|TJAP1|93643|tight junction associated protein 1 (peripheral)##AK123398|TJAP1|93643|tight junction associated protein 1 (peripheral)##BC107130|LRRC73|221424|leucine rich repeat containing 73##BC108661|LRRC73|221424|leucine rich repeat containing 73##NM_001012974|LRRC73|221424|leucine rich repeat containing 73##AL050274|YIPF3|25844|Yip1 domain family, member 3##AM393648|YIPF3|25844|Yip1 domain family, member 3##AM393729|YIPF3|25844|Yip1 domain family, member 3##AK021655|YIPF3|25844|Yip1 domain family, member 3##AK022757|YIPF3|25844|Yip1 domain family, member 3##AK021433|YIPF3|25844|Yip1 domain family, member 3##AF162672|YIPF3|25844|Yip1 domain family, member 3##AK000946|YIPF3|25844|Yip1 domain family, member 3##AK298150|YIPF3|25844|Yip1 domain family, member 3##AK308961|YIPF3|25844|Yip1 domain family, member 3##BC019297|YIPF3|25844|Yip1 domain family, member 3	1.014337	CTCF.p2:7:0.999
chr8	129335018	129335148	reg1006838.p1	12.237	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-528300	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-586593	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-586758	+	AB042405 NM_031415	1464050	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1616832	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1616923	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.328046	CTCF.p2:12:0.328
chr11	34388214	34388342	reg1008052.p1	12.236	+	TSC_hg19_v1_chr11_-_34379556 AK291744 NM_145804	-8723	-	TSC_hg19_v1_chr11_+_34127208 AK294044 AL136882 AK001636 BC014440 BC020205	-261028	+	NM_001144030 NM_024662 TSC_hg19_v1_chr11_+_34127175 AK022241 AK225341 BC035558 AB051496	-261121	+	TSC_hg19_v1_chr11_+_34460487 AK291585 NM_001752 BC110398 AK315350 X04076 BC112217 BC112219	72196	+	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	72271	+	AB528439 AK290817 AF115402 NM_001243081 NM_198381	144953	-	AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##AK294044|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AL136882|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK001636|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC014440|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC020205|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_001144030|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_024662|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK022241|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK225341|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC035558|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AB051496|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK291585|CAT|847|catalase##NM_001752|CAT|847|catalase##BC110398|CAT|847|catalase##AK315350|CAT|847|catalase##X04076|CAT|847|catalase##BC112217|CAT|847|catalase##BC112219|CAT|847|catalase##AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase##AK290817|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115402|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243081|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_198381|ELF5|2001|E74-like factor 5 (ets domain transcription factor)	0.982511	CTCF.p2:-13:0.983
chr13	102167207	102167352	reg1007777.p1	12.236	+	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	-62284	+	TSC_hg19_v1_chr13_-_102068838 BC028390	-98439	-	AY141972 AK094669 BC012128 NM_052867 TSC_hg19_v1_chr13_-_102068817	-98518	-	NM_004115 U66200	401715	-	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	886796	-	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	1082057	+	AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC028390|NALCN|259232|sodium leak channel, non-selective##AY141972|NALCN|259232|sodium leak channel, non-selective##AK094669|NALCN|259232|sodium leak channel, non-selective##BC012128|NALCN|259232|sodium leak channel, non-selective##NM_052867|NALCN|259232|sodium leak channel, non-selective##NM_004115|FGF14|2259|fibroblast growth factor 14##U66200|FGF14|2259|fibroblast growth factor 14##BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II	0.996115	CTCF.p2:-17:0.996
chr17	76108836	76108945	reg1002338.p1	12.234	+	BC039479 NM_001142640 NM_018996	-108608	+	TSC_hg19_v1_chr17_+_75543021 AK096234	-565870	+	AK056495 NM_001113495	-637566	+	TSC_hg19_v1_chr17_-_76124768 AK074065	15882	-	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	15948	-	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	17976	+	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK074065|TMC6|11322|transmembrane channel-like 6##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8	1.028287	CTCF.p2:-10:1.000
chr2	223804052	223804193	reg1009398.p1	12.234	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	-78375	+	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	-267713	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	-283328	-	NM_080671 TSC_hg19_v1_chr2_+_223916907 DQ192293 AK313203 BC014429 AY065987	112775	+	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	662944	-	TSC_hg19_v1_chr2_-_224467100 BC022509	662985	-	NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_080671|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##DQ192293|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AK313203|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##BC014429|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AY065987|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II##BC022509|SCG2|7857|secretogranin II	0.888761	CTCF.p2:-9:0.889
chr7	39559620	39559729	reg1005433.p1	12.233	+	NM_001166018 NM_007252	-542066	+	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	-610881	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	-888597	-	TSC_hg19_v1_chr7_+_39606002 AK314937 NM_020192 AK293511 AF226046 BC022043 CR457198 DQ892829 DQ896074 DQ896075	46295	+	TSC_hg19_v1_chr7_+_39663159 NM_005402	103492	+	TSC_hg19_v1_chr7_+_39663204 BC039858	103537	+	NM_001166018|POU6F2|11281|POU class 6 homeobox 2##NM_007252|POU6F2|11281|POU class 6 homeobox 2##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##AK314937|YAE1D1|57002|Yae1 domain containing 1##NM_020192|YAE1D1|57002|Yae1 domain containing 1##AF226046|YAE1D1|57002|Yae1 domain containing 1##BC022043|YAE1D1|57002|Yae1 domain containing 1##CR457198|YAE1D1|57002|Yae1 domain containing 1##DQ892829|YAE1D1|57002|Yae1 domain containing 1##DQ896074|YAE1D1|57002|Yae1 domain containing 1##DQ896075|YAE1D1|57002|Yae1 domain containing 1##NM_005402|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)	0.966888	CTCF.p2:25:0.967
chr10	135127438	135127551	reg1007255.p1	12.231	+	TSC_hg19_v1_chr10_+_135122914 EU937518	-4579	+	AK223586 NM_006659	-4898	-	TSC_hg19_v1_chr10_+_135122444 BC015139 BC019897 NM_145806 AK091711 AX747142 AK292380	-5085	+	TSC_hg19_v1_chr10_-_135150429 BC038978 AF225903	22908	-	NM_015722 TSC_hg19_v1_chr10_-_135150480	22983	-	NM_001145201 NM_145202 AY358908 BC093853 BC101743 BC143590 BC143591 BC143592 TSC_hg19_v1_chr10_+_135160889 AF421885 GU727628 BC061643 BC071872	33382	+	AK223586|TUBGCP2|10844|tubulin, gamma complex associated protein 2##NM_006659|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC015139|ZNF511|118472|zinc finger protein 511##BC019897|ZNF511|118472|zinc finger protein 511##NM_145806|ZNF511|118472|zinc finger protein 511##AK091711|ZNF511|118472|zinc finger protein 511##AK292380|ZNF511|118472|zinc finger protein 511##BC038978|CALY|50632|calcyon neuron-specific vesicular protein##AF225903|CALY|50632|calcyon neuron-specific vesicular protein##NM_015722|CALY|50632|calcyon neuron-specific vesicular protein##NM_001145201|PRAP1|118471|proline-rich acidic protein 1##NM_145202|PRAP1|118471|proline-rich acidic protein 1##AY358908|PRAP1|118471|proline-rich acidic protein 1##BC093853|PRAP1|118471|proline-rich acidic protein 1##BC101743|PRAP1|118471|proline-rich acidic protein 1##BC143590|PRAP1|118471|proline-rich acidic protein 1##BC143591|PRAP1|118471|proline-rich acidic protein 1##BC143592|PRAP1|118471|proline-rich acidic protein 1##AF421885|PRAP1|118471|proline-rich acidic protein 1##BC061643|PRAP1|118471|proline-rich acidic protein 1##BC071872|PRAP1|118471|proline-rich acidic protein 1	0.830069	CTCF.p2:7:0.830
chr11	64420702	64420805	reg1004600.p2	12.231	+	TSC_hg19_v1_chr11_-_64410785 NM_138734	-9962	-	BC043422 TSC_hg19_v1_chr11_-_64377473	-43351	-	AB050269 NM_144585 NM_153378	-62472	+	TSC_hg19_v1_chr11_-_64490666 AB023138 BC150275 NM_015080 NM_138732	69912	-	HQ258466 AB590919 TSC_hg19_v1_chr11_-_64510439	89643	-	TSC_hg19_v1_chr11_-_64510461 AK314637	89715	-	NM_138734|NRXN2|9379|neurexin 2##AB050269|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_144585|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_153378|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##AB023138|NRXN2|9379|neurexin 2##BC150275|NRXN2|9379|neurexin 2##NM_015080|NRXN2|9379|neurexin 2##NM_138732|NRXN2|9379|neurexin 2##HQ258466|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AK314637|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)	0.973219	CTCF.p2:-5:0.973
chr19	19754759	19754886	reg1005897.p2	12.231	+	TSC_hg19_v1_chr19_-_19754452 NM_016573	-367	-	BC126436 BC144142 TSC_hg19_v1_chr19_-_19754416 BC032057 AK297220 AF132541	-429	-	AF011466 AK316573 BC025695 AF197929 TSC_hg19_v1_chr19_-_19739025 NM_004720	-15815	-	AB058728 AB385506 TSC_hg19_v1_chr19_-_19774486 AK056420	19662	-	TSC_hg19_v1_chr19_-_19774501 NM_020410	19687	-	AK097169 BC094808 AY149174 NM_033204 BC119680 BC119681	24835	+	NM_016573|GMIP|51291|GEM interacting protein##BC126436|GMIP|51291|GEM interacting protein##BC144142|GMIP|51291|GEM interacting protein##BC032057|GMIP|51291|GEM interacting protein##AK297220|GMIP|51291|GEM interacting protein##AF132541|GMIP|51291|GEM interacting protein##AF011466|LPAR2|9170|lysophosphatidic acid receptor 2##AK316573|LPAR2|9170|lysophosphatidic acid receptor 2##BC025695|LPAR2|9170|lysophosphatidic acid receptor 2##AF197929|LPAR2|9170|lysophosphatidic acid receptor 2##NM_004720|LPAR2|9170|lysophosphatidic acid receptor 2##AB058728|ATP13A1|57130|ATPase type 13A1##AK056420|ATP13A1|57130|ATPase type 13A1##NM_020410|ATP13A1|57130|ATPase type 13A1##AK097169|ZNF101|94039|zinc finger protein 101##BC094808|ZNF101|94039|zinc finger protein 101##AY149174|ZNF101|94039|zinc finger protein 101##NM_033204|ZNF101|94039|zinc finger protein 101##BC119680|ZNF101|94039|zinc finger protein 101##BC119681|ZNF101|94039|zinc finger protein 101	0.999518	CTCF.p2:10:1.000
chr10	111738285	111738405	reg1007114.p1	12.230	+	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	-55068	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	-55136	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-2813969	-	NM_019903 AB209810 BC057285	27436	+	TSC_hg19_v1_chr10_+_111767741 BX647403 NM_001121 NM_016824 BC062559 BX648016	29384	+	AK291488 TSC_hg19_v1_chr10_+_111767988 U37122 BC043143	29622	+	AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)##BX647403|ADD3|120|adducin 3 (gamma)##NM_001121|ADD3|120|adducin 3 (gamma)##NM_016824|ADD3|120|adducin 3 (gamma)##BC062559|ADD3|120|adducin 3 (gamma)##BX648016|ADD3|120|adducin 3 (gamma)##AK291488|ADD3|120|adducin 3 (gamma)##U37122|ADD3|120|adducin 3 (gamma)##BC043143|ADD3|120|adducin 3 (gamma)	0.188821	
chr10	90695237	90695376	reg1006526.p3	12.230	+	TSC_hg19_v1_chr10_+_90640003 AK056086 BC010846 NM_020799	-55328	+	AX721211 NM_144590	-83603	-	EF426484 NM_001128215	-132820	+	J05192 X13839 BC017554 TSC_hg19_v1_chr10_-_90712531 AK300353 BC093052 AK300664 AK313294 NM_001613	17238	-	NM_000043 NM_152871 NM_152872 BC012479 TSC_hg19_v1_chr10_+_90750342	55012	+	TSC_hg19_v1_chr10_+_90750599 AK290978 X63717 M67454 X83490 X83491 X83492 X83493 DQ894675 AY495076 CR450307 EU481974 FJ373045 FJ373046 FM246457 FM246458 FM246459 X89101 Z47993 Z47994 Z47995 Z66556 Z70519 Z70520	55202	+	AK056086|STAMBPL1|57559|STAM binding protein-like 1##BC010846|STAMBPL1|57559|STAM binding protein-like 1##NM_020799|STAMBPL1|57559|STAM binding protein-like 1##NM_144590|ANKRD22|118932|ankyrin repeat domain 22##EF426484|LIPM|340654|lipase, family member M##NM_001128215|LIPM|340654|lipase, family member M##J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta##X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_000043|FAS|355|Fas (TNF receptor superfamily, member 6)##NM_152871|FAS|355|Fas (TNF receptor superfamily, member 6)##NM_152872|FAS|355|Fas (TNF receptor superfamily, member 6)##BC012479|FAS|355|Fas (TNF receptor superfamily, member 6)##AK290978|FAS|355|Fas (TNF receptor superfamily, member 6)##X63717|FAS|355|Fas (TNF receptor superfamily, member 6)##M67454|FAS|355|Fas (TNF receptor superfamily, member 6)##X83490|FAS|355|Fas (TNF receptor superfamily, member 6)##X83491|FAS|355|Fas (TNF receptor superfamily, member 6)##X83492|FAS|355|Fas (TNF receptor superfamily, member 6)##X83493|FAS|355|Fas (TNF receptor superfamily, member 6)##DQ894675|FAS|355|Fas (TNF receptor superfamily, member 6)##AY495076|FAS|355|Fas (TNF receptor superfamily, member 6)##CR450307|FAS|355|Fas (TNF receptor superfamily, member 6)##EU481974|FAS|355|Fas (TNF receptor superfamily, member 6)##FJ373045|FAS|355|Fas (TNF receptor superfamily, member 6)##FJ373046|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246457|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246458|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246459|FAS|355|Fas (TNF receptor superfamily, member 6)##X89101|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47993|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47994|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47995|FAS|355|Fas (TNF receptor superfamily, member 6)##Z66556|FAS|355|Fas (TNF receptor superfamily, member 6)##Z70519|FAS|355|Fas (TNF receptor superfamily, member 6)##Z70520|FAS|355|Fas (TNF receptor superfamily, member 6)	0.928987	CTCF.p2:-4:0.929
chr17	53070543	53070691	reg1009590.p1	12.230	+	TSC_hg19_v1_chr17_+_53046125 AK122865 NM_178509 BC125116 BC041485	-24490	+	TSC_hg19_v1_chr17_-_53046016 AK293851 CR541837 DQ893136 DQ896418 AF044321 BC005895 AK295381 NM_001162861 NM_001162862 NM_004375	-24600	-	TSC_hg19_v1_chr17_+_52978217 NM_005486 AK001893 AK309164 AK225351 AJ010071 AK303912 AK300823 AK303913 AK315039 AK315907 AK223125 BC029396 AB590855	-92461	+	NM_002126 TSC_hg19_v1_chr17_+_53342320	271715	+	TSC_hg19_v1_chr17_+_53342370 BC036093 M95585	271824	+	AK290043 TSC_hg19_v1_chr17_+_53343204	272570	+	AK122865|STXBP4|252983|syntaxin binding protein 4##NM_178509|STXBP4|252983|syntaxin binding protein 4##BC125116|STXBP4|252983|syntaxin binding protein 4##BC041485|STXBP4|252983|syntaxin binding protein 4##AK293851|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##CR541837|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##DQ893136|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##DQ896418|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AF044321|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##BC005895|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AK295381|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_001162861|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_001162862|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_004375|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1##AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1##AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1##AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1##AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1##AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1##AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1##BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1##NM_002126|HLF|3131|hepatic leukemia factor##BC036093|HLF|3131|hepatic leukemia factor##M95585|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor	0.931892	CTCF.p2:-11:0.932
chr22	47609437	47609575	reg1007981.p1	12.230	+	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	-450906	+	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	-475351	-	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	-475427	-	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	417997	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	1275774	+	AK125256 NM_015381 AK123443 AY358847	1362655	+	NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##AK093107|LOC284930|284930|uncharacterized LOC284930##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	0.461968	CTCF.p2:5:0.415
chr7	95156874	95157014	reg1007209.p1	12.229	+	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-41651	+	TSC_hg19_v1_chr7_-_95064341 AB102891 CU692318 AB591009 L48513 BC040010 AF001602 AF001601 BC073739 AK296029 BC093006 BC046160 AK291103 AK308065 AK315209 AK296636 BC009728 NM_000305 NM_001018161 AK301313	-92583	-	L48516 AF320003 AF329433 CU687094 TSC_hg19_v1_chr7_-_95025687 AK301772 BC070374 AK304282 NM_000940	-131288	-	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	68919	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	244964	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	794458	-	BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##AB102891|PON2|5445|paraoxonase 2##L48513|PON2|5445|paraoxonase 2##BC040010|PON2|5445|paraoxonase 2##AF001602|PON2|5445|paraoxonase 2##AF001601|PON2|5445|paraoxonase 2##AK296029|PON2|5445|paraoxonase 2##BC093006|PON2|5445|paraoxonase 2##BC046160|PON2|5445|paraoxonase 2##AK291103|PON2|5445|paraoxonase 2##AK308065|PON2|5445|paraoxonase 2##AK315209|PON2|5445|paraoxonase 2##AK296636|PON2|5445|paraoxonase 2##BC009728|PON2|5445|paraoxonase 2##NM_000305|PON2|5445|paraoxonase 2##NM_001018161|PON2|5445|paraoxonase 2##AK301313|PON2|5445|paraoxonase 2##L48516|PON3|5446|paraoxonase 3##AF320003|PON3|5446|paraoxonase 3##AF329433|PON3|5446|paraoxonase 3##BC070374|PON3|5446|paraoxonase 3##AK304282|PON3|5446|paraoxonase 3##NM_000940|PON3|5446|paraoxonase 3##BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	0.992307	CTCF.p2:-17:0.992
chr8	38571953	38572057	reg1006519.p1	12.229	+	BC137511 BC137512 BC139744 AK125570 NM_207412	-185829	-	FJ809916 FJ809917 NM_001174063 NM_001174064 NM_015850 NM_023105 NM_023106 NM_023110	-245654	-	BC018128 TSC_hg19_v1_chr8_-_38326154 M60485 X66945 AB208919 BC015035 AK222718 AK223126	-245854	-	BX647696 NM_001146216	13698	+	AY072874 AY072875 TSC_hg19_v1_chr8_+_38614814 AK308849	42781	+	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	72717	+	BC137511|C8orf86|389649|chromosome 8 open reading frame 86##BC137512|C8orf86|389649|chromosome 8 open reading frame 86##BC139744|C8orf86|389649|chromosome 8 open reading frame 86##AK125570|C8orf86|389649|chromosome 8 open reading frame 86##NM_207412|C8orf86|389649|chromosome 8 open reading frame 86##FJ809916|FGFR1|2260|fibroblast growth factor receptor 1##FJ809917|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174063|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174064|FGFR1|2260|fibroblast growth factor receptor 1##NM_015850|FGFR1|2260|fibroblast growth factor receptor 1##NM_023105|FGFR1|2260|fibroblast growth factor receptor 1##NM_023106|FGFR1|2260|fibroblast growth factor receptor 1##NM_023110|FGFR1|2260|fibroblast growth factor receptor 1##BC018128|FGFR1|2260|fibroblast growth factor receptor 1##M60485|FGFR1|2260|fibroblast growth factor receptor 1##X66945|FGFR1|2260|fibroblast growth factor receptor 1##AB208919|FGFR1|2260|fibroblast growth factor receptor 1##BC015035|FGFR1|2260|fibroblast growth factor receptor 1##AK222718|FGFR1|2260|fibroblast growth factor receptor 1##AK223126|FGFR1|2260|fibroblast growth factor receptor 1##BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072874|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072875|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK308849|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1	0.917235	CTCF.p2:1:0.917
chr10	6244688	6244817	reg1005599.p1	12.228	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-57840	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-57868	+	AK302518 TSC_hg19_v1_chr10_+_6186860 NM_001145443	-57936	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	124	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	377509	-	TSC_hg19_v1_chr10_+_6622460 AY007155	377728	+	AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##NM_001145443|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949	0.450816	CTCF.p2:-9:0.451
chr5	149942563	149942667	reg1004314.p1	12.228	+	AK292448 NM_001543 U36600	-54902	+	TSC_hg19_v1_chr5_+_149865341 AB209107	-77176	+	TSC_hg19_v1_chr5_-_149829301 BC003401 BC001126 BC006784 BC110792 AK312179 BC091474 NM_001025070 NM_001025071 NM_005617	-113324	-	TSC_hg19_v1_chr5_+_149980641 AL831818 NM_001166208	38027	+	AK127049 NM_001166209	54590	+	TSC_hg19_v1_chr5_+_150020221 NM_001109974 NM_007286 AK290178 BC042624 BC146665 AB028952 BC152538 BC142683 AF499136 AF499137	77678	+	AK292448|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##NM_001543|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##U36600|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##BC003401|RPS14|6208|ribosomal protein S14##BC001126|RPS14|6208|ribosomal protein S14##BC006784|RPS14|6208|ribosomal protein S14##BC110792|RPS14|6208|ribosomal protein S14##AK312179|RPS14|6208|ribosomal protein S14##BC091474|RPS14|6208|ribosomal protein S14##NM_001025070|RPS14|6208|ribosomal protein S14##NM_001025071|RPS14|6208|ribosomal protein S14##NM_005617|RPS14|6208|ribosomal protein S14##AL831818|SYNPO|11346|synaptopodin##NM_001166208|SYNPO|11346|synaptopodin##AK127049|SYNPO|11346|synaptopodin##NM_001166209|SYNPO|11346|synaptopodin##NM_001109974|SYNPO|11346|synaptopodin##NM_007286|SYNPO|11346|synaptopodin##AK290178|SYNPO|11346|synaptopodin##BC042624|SYNPO|11346|synaptopodin##BC146665|SYNPO|11346|synaptopodin##AB028952|SYNPO|11346|synaptopodin##BC152538|SYNPO|11346|synaptopodin##BC142683|SYNPO|11346|synaptopodin##AF499136|SYNPO|11346|synaptopodin##AF499137|SYNPO|11346|synaptopodin	0.993961	CTCF.p2:6:0.994
chr7	23095342	23095464	reg1006691.p1	12.228	+	TSC_hg19_v1_chr7_-_23053750 BC018710 NM_032581	-41653	-	AB030241 AK056319 AK297399 TSC_hg19_v1_chr7_-_23053708 AL833296	-41708	-	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	-232960	-	TSC_hg19_v1_chr7_+_23145396 NM_001031710 NM_001172428 AK297421 AK056390	49969	+	TSC_hg19_v1_chr7_+_23145403 AK297595 AL136597 AK296219 AK297369 BC039585 BC009555 AF111113 AK290479 EF560731 EU831631 EU831716 EU831829	50121	+	NM_018846	50513	+	BC018710|FAM126A|84668|family with sequence similarity 126, member A##NM_032581|FAM126A|84668|family with sequence similarity 126, member A##AB030241|FAM126A|84668|family with sequence similarity 126, member A##AK056319|FAM126A|84668|family with sequence similarity 126, member A##AK297399|FAM126A|84668|family with sequence similarity 126, member A##AL833296|FAM126A|84668|family with sequence similarity 126, member A##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_001031710|KLHL7|55975|kelch-like 7 (Drosophila)##NM_001172428|KLHL7|55975|kelch-like 7 (Drosophila)##AK297421|KLHL7|55975|kelch-like 7 (Drosophila)##AK056390|KLHL7|55975|kelch-like 7 (Drosophila)##AK297595|KLHL7|55975|kelch-like 7 (Drosophila)##AL136597|KLHL7|55975|kelch-like 7 (Drosophila)##AK296219|KLHL7|55975|kelch-like 7 (Drosophila)##AK297369|KLHL7|55975|kelch-like 7 (Drosophila)##BC039585|KLHL7|55975|kelch-like 7 (Drosophila)##BC009555|KLHL7|55975|kelch-like 7 (Drosophila)##AF111113|KLHL7|55975|kelch-like 7 (Drosophila)##AK290479|KLHL7|55975|kelch-like 7 (Drosophila)##EF560731|KLHL7|55975|kelch-like 7 (Drosophila)##EU831631|KLHL7|55975|kelch-like 7 (Drosophila)##EU831716|KLHL7|55975|kelch-like 7 (Drosophila)##EU831829|KLHL7|55975|kelch-like 7 (Drosophila)##NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)	0.920583	CTCF.p2:1:0.921
chr1	110036556	110036683	reg1006153.p1	12.227	+	TSC_hg19_v1_chr1_+_110026580 BC036849 NM_153340	-10073	+	TSC_hg19_v1_chr1_+_110009222 AK293082	-27398	+	AK131459 NM_001040709 AK289513 AK302566 TSC_hg19_v1_chr1_+_110009189	-27474	+	NM_001134402 AK126707 NM_001134400 NM_001134403 NM_001134404 NM_182580 TSC_hg19_v1_chr1_+_110036712 AK299086 BX647509 AK096354 AK303546 BC093683 BC111999 BC143308 AK294992 AK128798	77	+	TSC_hg19_v1_chr1_-_110052350 BC040879 AK295678 NM_020703	15715	-	AK290027 NM_031936 AF258342	45881	+	BC036849|ATXN7L2|127002|ataxin 7-like 2##NM_153340|ATXN7L2|127002|ataxin 7-like 2##AK293082|SYPL2|284612|synaptophysin-like 2##AK131459|SYPL2|284612|synaptophysin-like 2##NM_001040709|SYPL2|284612|synaptophysin-like 2##AK289513|SYPL2|284612|synaptophysin-like 2##AK302566|SYPL2|284612|synaptophysin-like 2##NM_001134402|CYB561D1|284613|cytochrome b-561 domain containing 1##AK126707|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134400|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134403|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134404|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_182580|CYB561D1|284613|cytochrome b-561 domain containing 1##AK299086|CYB561D1|284613|cytochrome b-561 domain containing 1##BX647509|CYB561D1|284613|cytochrome b-561 domain containing 1##AK096354|CYB561D1|284613|cytochrome b-561 domain containing 1##AK303546|CYB561D1|284613|cytochrome b-561 domain containing 1##BC093683|CYB561D1|284613|cytochrome b-561 domain containing 1##BC111999|CYB561D1|284613|cytochrome b-561 domain containing 1##BC143308|CYB561D1|284613|cytochrome b-561 domain containing 1##AK294992|CYB561D1|284613|cytochrome b-561 domain containing 1##AK128798|CYB561D1|284613|cytochrome b-561 domain containing 1##BC040879|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK295678|AMIGO1|57463|adhesion molecule with Ig-like domain 1##NM_020703|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK290027|GPR61|83873|G protein-coupled receptor 61##NM_031936|GPR61|83873|G protein-coupled receptor 61##AF258342|GPR61|83873|G protein-coupled receptor 61	0.894662	CTCF.p2:0:0.895
chr2	55065811	55065932	reg1005259.p1	12.227	+	NM_001039753	-113723	+	TSC_hg19_v1_chr2_+_54785519 AF327441 NM_178313 BC137282 BC137283	-280306	+	TSC_hg19_v1_chr2_+_54684338 BC032061	-381504	+	TSC_hg19_v1_chr2_-_55199899 BC131571	134037	-	AJ251385 AM392753 AM393122 AM393280 AM393537 BC139928 DQ778739 AF087901 BC014366 TSC_hg19_v1_chr2_-_55237387 BC007109 AF177332 AF132048 BC001035 AF077050 AF125103 NM_007008 AY102276	171501	-	AK302741 AF333336 NM_207521 AY123248	210439	-	NM_001039753|EML6|400954|echinoderm microtubule associated protein like 6##AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AJ251385|RTN4|57142|reticulon 4##AM392753|RTN4|57142|reticulon 4##AM393122|RTN4|57142|reticulon 4##AM393280|RTN4|57142|reticulon 4##AM393537|RTN4|57142|reticulon 4##BC139928|RTN4|57142|reticulon 4##DQ778739|RTN4|57142|reticulon 4##AF087901|RTN4|57142|reticulon 4##BC014366|RTN4|57142|reticulon 4##BC007109|RTN4|57142|reticulon 4##AF177332|RTN4|57142|reticulon 4##AF132048|RTN4|57142|reticulon 4##BC001035|RTN4|57142|reticulon 4##AF077050|RTN4|57142|reticulon 4##AF125103|RTN4|57142|reticulon 4##NM_007008|RTN4|57142|reticulon 4##AY102276|RTN4|57142|reticulon 4##AK302741|RTN4|57142|reticulon 4##AF333336|RTN4|57142|reticulon 4##NM_207521|RTN4|57142|reticulon 4##AY123248|RTN4|57142|reticulon 4	0.998935	CTCF.p2:7:0.999
chr5	180864473	180864654	reg1003387.p2	12.227	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-70286	+	TSC_hg19_v1_chr5_+_180688213 BC016291	-176336	+	AK054802 TSC_hg19_v1_chr5_-_180688115 BC007372 NM_032765 AB209243	-176438	-	None	None	None	None	None	None	None	None	None	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##AK054802|TRIM52|84851|tripartite motif containing 52##BC007372|TRIM52|84851|tripartite motif containing 52##NM_032765|TRIM52|84851|tripartite motif containing 52##AB209243|TRIM52|84851|tripartite motif containing 52	2.931006	CTCF.p2:-13:0.977	CTCF.p2:54:0.977	CTCF.p2:-81:0.977
chr9	103358008	103358126	reg1006197.p2	12.226	+	NM_001018116 AK300099 TSC_hg19_v1_chr9_+_103340380 EU487253 BC090888	-17678	+	TSC_hg19_v1_chr9_+_103235637 BC035056 DQ891732 DQ894909	-122338	+	TSC_hg19_v1_chr9_+_103235495 NM_003692	-122563	+	NM_207299 AK303807 TSC_hg19_v1_chr9_+_103791087	432999	+	AK000307 AK225306 BC029380 NM_017753 TSC_hg19_v1_chr9_+_103947336	589259	+	NM_001127610 AK315347	787755	-	NM_001018116|MURC|347273|muscle-related coiled-coil protein##AK300099|MURC|347273|muscle-related coiled-coil protein##EU487253|MURC|347273|muscle-related coiled-coil protein##BC090888|MURC|347273|muscle-related coiled-coil protein##BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_207299|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK303807|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_001127610|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##AK315347|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)	0.91718	CTCF.p2:13:0.917
chr10	64918005	64918134	reg1005984.p2	12.225	+	TSC_hg19_v1_chr10_+_64893098 AF267866 AK301656 AK225257 AK225256 AY267839 AY267840 BC011707 AB590768 EU832288 EU832373	-24923	+	TSC_hg19_v1_chr10_+_64893044 NM_030759 AK054957 AL136656	-25038	+	AK312813 NM_001136178	-339143	-	BC126403 BC143722 TSC_hg19_v1_chr10_-_65029004 BX537954 NM_004241 BC108649	110846	-	TSC_hg19_v1_chr10_+_65224979 BC007866 AK314171	306915	+	AK027280 EF068222 NM_032776 TSC_hg19_v1_chr10_-_65225738	307609	-	AF267866|NRBF2|29982|nuclear receptor binding factor 2##AK301656|NRBF2|29982|nuclear receptor binding factor 2##AK225257|NRBF2|29982|nuclear receptor binding factor 2##AK225256|NRBF2|29982|nuclear receptor binding factor 2##AY267839|NRBF2|29982|nuclear receptor binding factor 2##AY267840|NRBF2|29982|nuclear receptor binding factor 2##BC011707|NRBF2|29982|nuclear receptor binding factor 2##EU832288|NRBF2|29982|nuclear receptor binding factor 2##EU832373|NRBF2|29982|nuclear receptor binding factor 2##NM_030759|NRBF2|29982|nuclear receptor binding factor 2##AK054957|NRBF2|29982|nuclear receptor binding factor 2##AL136656|NRBF2|29982|nuclear receptor binding factor 2##AK312813|EGR2|1959|early growth response 2##NM_001136178|EGR2|1959|early growth response 2##BC126403|JMJD1C|221037|jumonji domain containing 1C##BC143722|JMJD1C|221037|jumonji domain containing 1C##BX537954|JMJD1C|221037|jumonji domain containing 1C##NM_004241|JMJD1C|221037|jumonji domain containing 1C##BC108649|JMJD1C|221037|jumonji domain containing 1C##BC007866|LOC84989|84989|uncharacterized LOC84989##AK314171|LOC84989|84989|uncharacterized LOC84989##AK027280|JMJD1C|221037|jumonji domain containing 1C##EF068222|JMJD1C|221037|jumonji domain containing 1C##NM_032776|JMJD1C|221037|jumonji domain containing 1C	0.999703	CTCF.p2:9:1.000
chr3	45082342	45082449	reg1006677.p1	12.225	+	AK312093 NM_003278 X64559 TSC_hg19_v1_chr3_+_45067794 BC011024 CU679874 CR541981 CR542009	-14593	+	TSC_hg19_v1_chr3_+_45017751 BC012831 AB384439 D29958	-64635	+	TSC_hg19_v1_chr3_+_45017742 AK315741 NM_015004 AK295779	-64658	+	AB527383 CU676820 TSC_hg19_v1_chr3_-_45187791	105391	-	TSC_hg19_v1_chr3_-_45187849 AY375452 AY026461	105456	-	TSC_hg19_v1_chr3_-_45187871 BC069254 AY167484 AY358779 AK314441 AF468010 AK026622	105480	-	AK312093|CLEC3B|7123|C-type lectin domain family 3, member B##NM_003278|CLEC3B|7123|C-type lectin domain family 3, member B##X64559|CLEC3B|7123|C-type lectin domain family 3, member B##BC011024|CLEC3B|7123|C-type lectin domain family 3, member B##CR541981|CLEC3B|7123|C-type lectin domain family 3, member B##CR542009|CLEC3B|7123|C-type lectin domain family 3, member B##BC012831|EXOSC7|23016|exosome component 7##D29958|EXOSC7|23016|exosome component 7##AK315741|EXOSC7|23016|exosome component 7##NM_015004|EXOSC7|23016|exosome component 7##AK295779|EXOSC7|23016|exosome component 7##AY375452|CDCP1|64866|CUB domain containing protein 1##AY026461|CDCP1|64866|CUB domain containing protein 1##BC069254|CDCP1|64866|CUB domain containing protein 1##AY167484|CDCP1|64866|CUB domain containing protein 1##AY358779|CDCP1|64866|CUB domain containing protein 1##AK314441|CDCP1|64866|CUB domain containing protein 1##AF468010|CDCP1|64866|CUB domain containing protein 1##AK026622|CDCP1|64866|CUB domain containing protein 1	0.938332	CTCF.p2:0:0.938
chr17	47957993	47958115	reg1006485.p1	12.224	+	AF515828 AF515829 AF515830 AF515831 AF521560 AY471574 BC100840 BC100841 BC100842 BC100843 BC111857 BC111858 NM_001077503 NM_001077504 NM_001077505 NM_001077506 NM_170685	-32676	-	AK127421 NM_001242791	-34783	+	TSC_hg19_v1_chr17_+_47866119 AF074606 AB463912 CU689460 DQ890883 DQ894037	-91896	+	BC016145 NM_138281 AF254115	88508	+	U31762 TSC_hg19_v1_chr17_+_48049688	91629	+	NM_001934 U73328	92075	+	AF515828|TAC4|255061|tachykinin 4 (hemokinin)##AF515829|TAC4|255061|tachykinin 4 (hemokinin)##AF515830|TAC4|255061|tachykinin 4 (hemokinin)##AF515831|TAC4|255061|tachykinin 4 (hemokinin)##AF521560|TAC4|255061|tachykinin 4 (hemokinin)##AY471574|TAC4|255061|tachykinin 4 (hemokinin)##BC100840|TAC4|255061|tachykinin 4 (hemokinin)##BC100841|TAC4|255061|tachykinin 4 (hemokinin)##BC100842|TAC4|255061|tachykinin 4 (hemokinin)##BC100843|TAC4|255061|tachykinin 4 (hemokinin)##BC111857|TAC4|255061|tachykinin 4 (hemokinin)##BC111858|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077503|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077504|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077505|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077506|TAC4|255061|tachykinin 4 (hemokinin)##NM_170685|TAC4|255061|tachykinin 4 (hemokinin)##AK127421|FLJ45513|729220|uncharacterized LOC729220##NM_001242791|FLJ45513|729220|uncharacterized LOC729220##AF074606|KAT7|11143|K(lysine) acetyltransferase 7##DQ890883|KAT7|11143|K(lysine) acetyltransferase 7##DQ894037|KAT7|11143|K(lysine) acetyltransferase 7##BC016145|DLX4|1748|distal-less homeobox 4##NM_138281|DLX4|1748|distal-less homeobox 4##AF254115|DLX4|1748|distal-less homeobox 4##U31762|DLX4|1748|distal-less homeobox 4##NM_001934|DLX4|1748|distal-less homeobox 4##U73328|DLX4|1748|distal-less homeobox 4	0.0	
chr2	39455352	39455473	reg1006114.p1	12.224	+	TSC_hg19_v1_chr2_-_39348166 AK290228	-107253	-	L13857 AB463274 NM_005633	-107830	-	TSC_hg19_v1_chr2_-_39187477 BC030087	-267932	-	AY845084 AY847283 NM_001009565 BC144460	1292	-	EU832785 GQ129258 AB384884 NM_003618 TSC_hg19_v1_chr2_-_39664286 AK314487	208797	-	TSC_hg19_v1_chr2_-_39664294 BC060880	208889	-	AK290228|SOS1|6654|son of sevenless homolog 1 (Drosophila)##L13857|SOS1|6654|son of sevenless homolog 1 (Drosophila)##NM_005633|SOS1|6654|son of sevenless homolog 1 (Drosophila)##BC030087|LOC375196|375196|uncharacterized LOC375196##AY845084|CDKL4|344387|cyclin-dependent kinase-like 4##AY847283|CDKL4|344387|cyclin-dependent kinase-like 4##NM_001009565|CDKL4|344387|cyclin-dependent kinase-like 4##BC144460|CDKL4|344387|cyclin-dependent kinase-like 4##EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	0.996339	CTCF.p2:11:0.996
chr14	70553947	70554067	reg1006919.p1	12.222	+	AK096553 AJ745101 AJ745102 BC114217 NM_182936 AK122728 BC142969 NM_001130417	-7115	-	NM_001034852 NM_022137 TSC_hg19_v1_chr14_+_70346132 AK289988 AK313063 AJ249900 BC011548 BC008608	-207878	+	CU687020 HQ258189 BC074724 BC126298 BC136355 AY544127 BC069822 BC069799 L21893 AK314028 NM_003049	-290069	-	BC036783 BX248763 TSC_hg19_v1_chr14_-_70655669 AF510501 AF510502 AF510503 NM_033262 NM_058240 NM_182932 NM_183002	101680	-	CR457199 AB528661 CU674840 BC001702 TSC_hg19_v1_chr14_-_70826389	272339	-	AF151037 AK290743 TSC_hg19_v1_chr14_-_70826395 AX810696 FJ460510 FJ460511 NM_001204090 NM_016468	272413	-	AK096553|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745101|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745102|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC114217|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182936|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AK122728|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC142969|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_001130417|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_001034852|SMOC1|64093|SPARC related modular calcium binding 1##NM_022137|SMOC1|64093|SPARC related modular calcium binding 1##AK289988|SMOC1|64093|SPARC related modular calcium binding 1##AK313063|SMOC1|64093|SPARC related modular calcium binding 1##AJ249900|SMOC1|64093|SPARC related modular calcium binding 1##BC011548|SMOC1|64093|SPARC related modular calcium binding 1##BC008608|SMOC1|64093|SPARC related modular calcium binding 1##HQ258189|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC074724|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC126298|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC136355|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AY544127|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC069822|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC069799|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##L21893|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AK314028|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##NM_003049|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC036783|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BX248763|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510501|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510502|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510503|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_033262|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_058240|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182932|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_183002|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##CR457199|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC001702|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##AF151037|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK290743|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##FJ460510|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##FJ460511|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_001204090|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_016468|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	0.0	
chr12	129129393	129129512	reg1004648.p1	12.220	+	NM_001136103	-377505	+	NM_052907	-3318291	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-3579384	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	178991	-	BC043528 TSC_hg19_v1_chr12_+_129337985	208532	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	208635	+	NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.999044	CTCF.p2:1:0.999
chr17	46680063	46680178	reg1007923.p1	12.220	+	M92299 TSC_hg19_v1_chr17_-_46671405	-8753	-	AB464575 BC117247 NM_002147 TSC_hg19_v1_chr17_-_46671142 AK314964	-9020	-	AK315102 TSC_hg19_v1_chr17_-_46667604 AK316245 AK291182	-12507	-	BC014651 NM_018952 TSC_hg19_v1_chr17_-_46682349 AK292200	2224	-	M30598 S49765 TSC_hg19_v1_chr17_-_46688105	7896	-	CU677273 BC015345 AK290653 TSC_hg19_v1_chr17_-_46688350	8194	-	M92299|HOXB5|3215|homeobox B5##BC117247|HOXB5|3215|homeobox B5##NM_002147|HOXB5|3215|homeobox B5##AK314964|HOXB5|3215|homeobox B5##AK315102|HOXB3|3213|homeobox B3##AK316245|HOXB3|3213|homeobox B3##AK291182|HOXB3|3213|homeobox B3##BC014651|HOXB6|3216|homeobox B6##NM_018952|HOXB6|3216|homeobox B6##AK292200|HOXB6|3216|homeobox B6##M30598|HOXB7|3217|homeobox B7##S49765|HOXB7|3217|homeobox B7##BC015345|HOXB7|3217|homeobox B7##AK290653|HOXB7|3217|homeobox B7	0.937386	CTCF.p2:0:0.937
chr4	164465673	164465803	reg1007925.p1	12.219	+	TSC_hg19_v1_chr4_+_164415868 BC011842	-49865	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-49896	+	TSC_hg19_v1_chr4_+_164415817 BC017418 AK298235	-49922	+	AB463878 AK000675 AK301408 NM_017923	68977	-	NM_012403	653124	-	AK289711 NM_001166373	838668	-	BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##BC017418|C4orf43|55319|chromosome 4 open reading frame 43##AK298235|C4orf43|55319|chromosome 4 open reading frame 43##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	0.990951	CTCF.p2:0:0.991
chr8	99182357	99182476	reg1007665.p1	12.219	+	BC011529 NM_015029	-52349	+	TSC_hg19_v1_chr8_+_99129543 NM_001145860 NM_001145861 X99302 AK291434	-52878	+	BC010280 TSC_hg19_v1_chr8_-_99129395 BC093059 BC012592 NM_005836 X95384	-53015	-	BC132687 BC144055 TSC_hg19_v1_chr8_-_99306600 AK024017 NM_024759	124183	-	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	256930	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	655431	-	BC011529|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015029|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001145860|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001145861|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##X99302|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##AK291434|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##BC010280|HRSP12|10247|heat-responsive protein 12##BC093059|HRSP12|10247|heat-responsive protein 12##BC012592|HRSP12|10247|heat-responsive protein 12##NM_005836|HRSP12|10247|heat-responsive protein 12##X95384|HRSP12|10247|heat-responsive protein 12##BC132687|NIPAL2|79815|NIPA-like domain containing 2##BC144055|NIPAL2|79815|NIPA-like domain containing 2##AK024017|NIPAL2|79815|NIPA-like domain containing 2##NM_024759|NIPAL2|79815|NIPA-like domain containing 2##BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3	0.055554	
chr22	23297008	23297109	reg1000648.p1	12.218	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	-66975	+	TSC_hg19_v1_chr22_+_23222900 AK127411 S77601 X57802 X57803 X57816 X57818 AB369252 AF026919 AF026925 AY190825 L26400 AF490955 AF490961	-74129	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	-83365	+	TSC_hg19_v1_chr22_+_23412527 BC037333 BC026342 NM_002073	115458	+	AK312519 TSC_hg19_v1_chr22_+_23412728 AK293653	115671	+	BC008986 AF133587 NM_014433 AK299530 AK310327	187185	-	AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AB369252|CYAT1|100290481|immunoglobulin lambda light chain-like##BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3##BC037333|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC026342|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##NM_002073|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK312519|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK293653|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1##AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1##NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1	0.0	
chr12	54754769	54754872	reg1005110.p2	12.217	+	TSC_hg19_v1_chr12_+_54718927 AK223188 BC002849 AB463530 CU678240	-35883	+	TSC_hg19_v1_chr12_+_54718925 AB047848 AF086911	-35895	+	TSC_hg19_v1_chr12_+_54718922 AK293377 AK295325	-35900	+	AF237762 AF282693 TSC_hg19_v1_chr12_-_54758271 BC020614 NM_020370 AK290394	3430	-	AB528580 CR457327 TSC_hg19_v1_chr12_-_54778374	23516	-	AK296564 TSC_hg19_v1_chr12_-_54778485 AF304052 NM_015481	23654	-	AK223188|COPZ1|22818|coatomer protein complex, subunit zeta 1##BC002849|COPZ1|22818|coatomer protein complex, subunit zeta 1##AB047848|COPZ1|22818|coatomer protein complex, subunit zeta 1##AF086911|COPZ1|22818|coatomer protein complex, subunit zeta 1##AK293377|COPZ1|22818|coatomer protein complex, subunit zeta 1##AK295325|COPZ1|22818|coatomer protein complex, subunit zeta 1##AF237762|GPR84|53831|G protein-coupled receptor 84##AF282693|GPR84|53831|G protein-coupled receptor 84##BC020614|GPR84|53831|G protein-coupled receptor 84##NM_020370|GPR84|53831|G protein-coupled receptor 84##AK290394|GPR84|53831|G protein-coupled receptor 84##CR457327|ZNF385A|25946|zinc finger protein 385A##AK296564|ZNF385A|25946|zinc finger protein 385A##AF304052|ZNF385A|25946|zinc finger protein 385A##NM_015481|ZNF385A|25946|zinc finger protein 385A	0.965464	CTCF.p2:-1:0.965
chr18	21699059	21699190	reg1006046.p1	12.217	+	AK296442 TSC_hg19_v1_chr18_+_21693341	-5796	+	TSC_hg19_v1_chr18_+_21594754 AK074875	-104368	+	TSC_hg19_v1_chr18_+_21594449 BC016833 NM_001135993 NM_001243425	-104725	+	TSC_hg19_v1_chr18_+_21718937 BC011996 NM_012189 NM_138643 NM_153768 NM_153769 NM_153770 AK313243	19831	+	AK225858 AK301889 TSC_hg19_v1_chr18_+_21719025 AF088868 AF295039 AF329634 AF295038 HQ659768	19918	+	NM_138644 AF295037	20324	+	AK296442|TTC39C|125488|tetratricopeptide repeat domain 39C##AK074875|TTC39C|125488|tetratricopeptide repeat domain 39C##BC016833|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001135993|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001243425|TTC39C|125488|tetratricopeptide repeat domain 39C##BC011996|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_012189|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_138643|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_153768|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_153769|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_153770|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK313243|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK225858|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK301889|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF088868|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF295039|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF329634|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF295038|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated	0.999966	CTCF.p2:14:1.000
chr2	114359628	114359754	reg1006294.p2	12.216	+	BC027921 TSC_hg19_v1_chr2_+_114341690	-17992	+	AK292759 AK309926 TSC_hg19_v1_chr2_+_114341689	-18002	+	AL137714 AK302089 AK308574 TSC_hg19_v1_chr2_+_114341674	-18074	+	TSC_hg19_v1_chr2_-_114384648 BC000596 BC105600	24957	-	TSC_hg19_v1_chr2_+_114384811 BC111008 NM_007082 NM_013412	25123	+	TSC_hg19_v1_chr2_+_114384849 AK289496 AF095350 AF095351 BC126129 BC144050 BC144052	25215	+	BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK292759|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##BC000596|RPL23AP7|118433|ribosomal protein L23a pseudogene 7##BC105600|RPL23AP7|118433|ribosomal protein L23a pseudogene 7##BC111008|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##NM_007082|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##NM_013412|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AK289496|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095350|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095351|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC126129|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144050|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144052|RABL2A|11159|RAB, member of RAS oncogene family-like 2A	1.079613	CTCF.p2:33:0.999
chr14	88480222	88480354	reg1008114.p1	12.215	+	NM_003608 TSC_hg19_v1_chr14_+_88471478 AK313797 BC035633 BC071715	-8788	+	NM_001201402	-20280	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	-20729	-	BC029479 TSC_hg19_v1_chr14_+_88490954	10635	+	EU978940 EU978941 BC075022 BC075021 AF385399 NM_138318 TSC_hg19_v1_chr14_-_88737268	256928	-	AK290518 TSC_hg19_v1_chr14_-_88789574 AK313499 NM_138317	309286	-	NM_003608|GPR65|8477|G protein-coupled receptor 65##AK313797|GPR65|8477|G protein-coupled receptor 65##BC035633|GPR65|8477|G protein-coupled receptor 65##BC071715|GPR65|8477|G protein-coupled receptor 65##NM_001201402|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##BC029479|LOC283587|283587|uncharacterized LOC283587##EU978940|KCNK10|54207|potassium channel, subfamily K, member 10##EU978941|KCNK10|54207|potassium channel, subfamily K, member 10##BC075022|KCNK10|54207|potassium channel, subfamily K, member 10##BC075021|KCNK10|54207|potassium channel, subfamily K, member 10##AF385399|KCNK10|54207|potassium channel, subfamily K, member 10##NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10##AK290518|KCNK10|54207|potassium channel, subfamily K, member 10##AK313499|KCNK10|54207|potassium channel, subfamily K, member 10##NM_138317|KCNK10|54207|potassium channel, subfamily K, member 10	0.605736	CTCF.p2:-10:0.606
chr2	7237520	7237630	reg1005910.p1	12.215	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-179988	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-219712	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-230872	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1584628	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1740144	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1906246	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.957651	CTCF.p2:-11:0.958
chr5	94073724	94073821	reg1006735.p1	12.215	+	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	-119399	+	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	-119515	-	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	-626452	-	AK025997 TSC_hg19_v1_chr5_-_94224607	150834	-	AY656716 AK058012 BC030005 AK057694 TSC_hg19_v1_chr5_-_94417350	343496	-	NM_001002796	343772	-	BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1##AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1##BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1##AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_001002796|MCTP1|79772|multiple C2 domains, transmembrane 1	0.490763	CTCF.p2:0:0.491
chr7	100005315	100005434	reg1004823.p2	12.215	+	TSC_hg19_v1_chr7_+_99971132 AJ400842 AJ400843 AK298731 AB590724 CU676074	-34169	+	AF161080 NM_013439 NM_178272 NM_178273 BC017812 TSC_hg19_v1_chr7_+_99971109 AJ400841	-34278	+	AJ400845 NM_178238 AF161081	-49743	+	AK302108 AK300745 TSC_hg19_v1_chr7_-_100026299 AL136735 NM_017984 AK299989	20928	-	NM_001194990 NM_001194991 NM_001194992 TSC_hg19_v1_chr7_+_100026412	21038	+	TSC_hg19_v1_chr7_+_100026415 AK055964	21054	+	AJ400842|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400843|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AK298731|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AF161080|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_013439|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178272|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178273|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##BC017812|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400841|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400845|PILRB|29990|paired immunoglobin-like type 2 receptor beta##NM_178238|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AF161081|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AK302108|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##AK300745|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##AL136735|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##NM_017984|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##AK299989|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##NM_001194990|MEPCE|56257|methylphosphate capping enzyme##NM_001194991|MEPCE|56257|methylphosphate capping enzyme##NM_001194992|MEPCE|56257|methylphosphate capping enzyme##AK055964|MEPCE|56257|methylphosphate capping enzyme	0.769102	CTCF.p2:1:0.769
chr3	150863921	150864035	reg1005260.p1	12.214	+	AF399708 NM_053002 BC144559	-59301	+	TSC_hg19_v1_chr3_+_150803504 AK128165	-60473	+	AF482697 NM_001195794 NM_174878	-173193	-	AF002986 BC036815 NM_013308	56988	-	AK289617 NM_001081455	102971	-	BC034989 D13626 NM_014879	132213	-	AF399708|MED12L|116931|mediator complex subunit 12-like##NM_053002|MED12L|116931|mediator complex subunit 12-like##BC144559|MED12L|116931|mediator complex subunit 12-like##AK128165|MED12L|116931|mediator complex subunit 12-like##AF482697|CLRN1|7401|clarin 1##NM_001195794|CLRN1|7401|clarin 1##NM_174878|CLRN1|7401|clarin 1##AF002986|GPR171|29909|G protein-coupled receptor 171##BC036815|GPR171|29909|G protein-coupled receptor 171##NM_013308|GPR171|29909|G protein-coupled receptor 171##AK289617|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_001081455|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	0.976269	CTCF.p2:5:0.976
chr3	194827267	194827388	reg1006110.p1	12.214	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-419824	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-420704	+	NM_018385	-434122	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	164523	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	336375	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	442786	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.011366	
chr2	232770912	232771033	reg1006592.p2	12.213	+	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-119856	+	TSC_hg19_v1_chr2_+_232646442 AK307486	-124535	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	-125047	-	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	20061	-	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	55388	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	472411	+	AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK307486|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental	0.999883	CTCF.p2:-10:1.000
chr3	196696863	196696977	reg1008082.p1	12.213	+	TSC_hg19_v1_chr3_-_196695705 BC018804 BC044640 AK022830 NM_025163	-1242	-	TSC_hg19_v1_chr3_+_196669559 AL832915 BC000257 BC007882	-27349	+	TSC_hg19_v1_chr3_+_196669529 BC062368 AK123020	-27410	+	BC032042 TSC_hg19_v1_chr3_+_196729798	32890	+	BT007377 AB527337 M12154 BC093920 BC111947 BC143257 BC002623 BC001875 BC007550 BC053510 BC071910 TSC_hg19_v1_chr3_-_196756658 BC032752	59703	-	TSC_hg19_v1_chr3_-_196756689 NM_033316 NM_005929	59782	-	BC018804|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##BC044640|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##AK022830|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##NM_025163|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##AL832915|LOC152217|152217|uncharacterized LOC152217##BC000257|LOC152217|152217|uncharacterized LOC152217##BC007882|LOC152217|152217|uncharacterized LOC152217##BC062368|LOC152217|152217|uncharacterized LOC152217##AK123020|LOC152217|152217|uncharacterized LOC152217##BC032042|MFI2-AS1|100507057|MFI2 antisense RNA 1 (non-protein coding)##BT007377|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##M12154|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC093920|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC111947|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC143257|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC002623|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC001875|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC007550|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC053510|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC071910|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC032752|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_033316|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_005929|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5	0.986666	CTCF.p2:4:0.987
chr3	53148067	53148202	reg1008578.p1	12.213	+	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	-68071	-	TSC_hg19_v1_chr3_-_53080023 BC014614 AF168132	-68140	-	TSC_hg19_v1_chr3_-_53079286 NM_001005159	-68825	-	TSC_hg19_v1_chr3_-_53164452 AJ318099 BC043595 NM_052859	16317	-	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	47085	+	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	141877	-	AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1##BC014614|SFMBT1|51460|Scm-like with four mbt domains 1##AF168132|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005159|SFMBT1|51460|Scm-like with four mbt domains 1##AJ318099|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043595|RFT1|91869|RFT1 homolog (S. cerevisiae)##NM_052859|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase	0.999314	CTCF.p2:-10:0.999
chr7	38255445	38255580	reg1007811.p1	12.213	+	TSC_hg19_v1_chr7_+_38217932 AK091579 AX747072 AJ492267 AY358645 BC005959	-37554	+	NM_032016 AK315404 TSC_hg19_v1_chr7_+_38217846	-37684	+	NM_001242948 AK309180	-294585	+	BC062761 BC105589 AF151103 NM_001003799 NM_001003806	57727	-	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	119692	-	Y00482 TSC_hg19_v1_chr7_-_38389512	133964	-	AK091579|STARD3NL|83930|STARD3 N-terminal like##AJ492267|STARD3NL|83930|STARD3 N-terminal like##AY358645|STARD3NL|83930|STARD3 N-terminal like##BC005959|STARD3NL|83930|STARD3 N-terminal like##NM_032016|STARD3NL|83930|STARD3 N-terminal like##AK315404|STARD3NL|83930|STARD3 N-terminal like##NM_001242948|EPDR1|54749|ependymin related protein 1 (zebrafish)##AK309180|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC062761|TRGV9|6983|T cell receptor gamma variable 9##BC105589|TARP|445347|TCR gamma alternate reading frame protein##AF151103|TARP|445347|TCR gamma alternate reading frame protein##NM_001003799|TARP|445347|TCR gamma alternate reading frame protein##NM_001003806|TARP|445347|TCR gamma alternate reading frame protein##BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)	0.983728	CTCF.p2:-11:0.974
chr14	61928604	61928737	reg1006644.p2	12.211	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-140143	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-180148	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-180476	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	233520	+	FJ790247 NM_001243084	235669	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	300449	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.999401	CTCF.p2:-14:0.999
chr17	38959908	38960038	reg1006616.p1	12.211	+	AB463813 AJ564207 AK129827 NM_181535	-3795	-	AJ564206 NM_181537	-21188	-	BC132951 BC136896 AJ564205 NM_181539	-31568	-	NM_001195387 TSC_hg19_v1_chr17_+_38975396 NM_145274 BC015365 AK298616 AK097454 NM_001195386	15416	+	J04029 AB590331 DQ893356 DQ896675 BC034697 NM_000421 TSC_hg19_v1_chr17_-_38978867	18874	-	D78367 NM_000223 AK313747	63495	-	AJ564207|KRT28|162605|keratin 28##AK129827|KRT28|162605|keratin 28##NM_181535|KRT28|162605|keratin 28##AJ564206|KRT27|342574|keratin 27##NM_181537|KRT27|342574|keratin 27##BC132951|KRT26|353288|keratin 26##BC136896|KRT26|353288|keratin 26##AJ564205|KRT26|353288|keratin 26##NM_181539|KRT26|353288|keratin 26##NM_001195387|TMEM99|147184|transmembrane protein 99##NM_145274|TMEM99|147184|transmembrane protein 99##BC015365|TMEM99|147184|transmembrane protein 99##AK298616|TMEM99|147184|transmembrane protein 99##AK097454|TMEM99|147184|transmembrane protein 99##NM_001195386|TMEM99|147184|transmembrane protein 99##J04029|KRT10|3858|keratin 10##DQ893356|KRT10|3858|keratin 10##DQ896675|KRT10|3858|keratin 10##BC034697|KRT10|3858|keratin 10##NM_000421|KRT10|3858|keratin 10##D78367|KRT12|3859|keratin 12##NM_000223|KRT12|3859|keratin 12##AK313747|KRT12|3859|keratin 12	1.175301	CTCF.p2:-8:0.996
chr18	74110995	74111125	reg1007750.p1	12.211	+	BC108287 TSC_hg19_v1_chr18_-_74092260	-18810	-	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-971438	-	TSC_hg19_v1_chr18_+_72998258 AK223545 BC024152	-1112718	+	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	96095	-	TSC_hg19_v1_chr18_-_74534239 BC032908	423179	-	TSC_hg19_v1_chr18_+_74534512 BX648028	423450	+	BC108287|ZNF516|9658|zinc finger protein 516##BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1##BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1##D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC032908|LOC100131655|100131655|uncharacterized LOC100131655##BX648028|ZNF236|7776|zinc finger protein 236	0.990206	CTCF.p2:-11:0.990
chr19	4352732	4352820	reg1005552.p1	12.211	+	NM_001159846 NM_032868 AK027887 AK308468 TSC_hg19_v1_chr19_+_4343562 BC032652	-9217	+	TSC_hg19_v1_chr19_-_4342718 AK125774	-10026	-	AB527779 TSC_hg19_v1_chr19_-_4338790 BC000795 AJ245719 AK000241 NM_001013841 NM_017720	-13978	-	TSC_hg19_v1_chr19_-_4400419 AY364240 CR542087 AB527297 DQ891258 DQ894444 U65999 X99656 AK097616 NM_001199944	47617	-	BC001270 TSC_hg19_v1_chr19_-_4400513 AK315450 BC098565 AK299166 NM_001199943 NM_003025	47777	-	BC067093 NM_005483 BC052620 TSC_hg19_v1_chr19_+_4402664 BC041606 AB527824 U20979 BC005813 BC011560	49940	+	NM_001159846|MPND|84954|MPN domain containing##NM_032868|MPND|84954|MPN domain containing##AK027887|MPND|84954|MPN domain containing##AK308468|MPND|84954|MPN domain containing##BC032652|MPND|84954|MPN domain containing##AK125774|STAP2|55620|signal transducing adaptor family member 2##BC000795|STAP2|55620|signal transducing adaptor family member 2##AJ245719|STAP2|55620|signal transducing adaptor family member 2##AK000241|STAP2|55620|signal transducing adaptor family member 2##NM_001013841|STAP2|55620|signal transducing adaptor family member 2##NM_017720|STAP2|55620|signal transducing adaptor family member 2##AY364240|SH3GL1|6455|SH3-domain GRB2-like 1##CR542087|SH3GL1|6455|SH3-domain GRB2-like 1##DQ891258|SH3GL1|6455|SH3-domain GRB2-like 1##DQ894444|SH3GL1|6455|SH3-domain GRB2-like 1##U65999|SH3GL1|6455|SH3-domain GRB2-like 1##X99656|SH3GL1|6455|SH3-domain GRB2-like 1##AK097616|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199944|SH3GL1|6455|SH3-domain GRB2-like 1##BC001270|SH3GL1|6455|SH3-domain GRB2-like 1##AK315450|SH3GL1|6455|SH3-domain GRB2-like 1##BC098565|SH3GL1|6455|SH3-domain GRB2-like 1##AK299166|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199943|SH3GL1|6455|SH3-domain GRB2-like 1##NM_003025|SH3GL1|6455|SH3-domain GRB2-like 1##BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	0.983634	CTCF.p2:-6:0.984
chr4	154049170	154049301	reg1008072.p1	12.210	+	NM_033393 AB051514	-185045	+	TSC_hg19_v1_chr4_+_153701117 AK290472 U52521 BC103759 BC105114 BC105116 BC143675 BC143676 AK096509	-348108	+	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	-348214	+	BC011052 NM_001130067	25034	+	TSC_hg19_v1_chr4_+_154125594 AK308731 NM_015271 AB011089 AF220018	76370	+	TSC_hg19_v1_chr4_+_154178530 BC025417	129304	+	NM_033393|FHDC1|85462|FH2 domain containing 1##AB051514|FHDC1|85462|FH2 domain containing 1##AK290472|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##U52521|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC103759|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105114|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105116|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143675|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143676|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK096509|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC011052|TRIM2|23321|tripartite motif containing 2##NM_001130067|TRIM2|23321|tripartite motif containing 2##AK308731|TRIM2|23321|tripartite motif containing 2##NM_015271|TRIM2|23321|tripartite motif containing 2##AB011089|TRIM2|23321|tripartite motif containing 2##AF220018|TRIM2|23321|tripartite motif containing 2##BC025417|TRIM2|23321|tripartite motif containing 2	0.988398	CTCF.p2:9:0.988
chr5	172721071	172721197	reg1007032.p1	12.210	+	AB021133 CU693024 AB464641 DQ893313 DQ894104 DQ896627 BC025711 AK290615 AK307249 AK297844 AK307218 AK309495 U34962 AK307247 NM_001166175 NM_001166176 NM_004387	-58935	-	NM_001205 NM_013978 NM_013979 NM_013980 BC010959 TSC_hg19_v1_chr5_+_172571536 AF083957 AF083958 U15172 AB527856 CU679862 AF083956 AY216799	-149638	+	TSC_hg19_v1_chr5_+_172484383 AK297424	-236751	+	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	34128	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	34309	-	AK095891 NM_003714	35371	-	AB021133|NKX2-5|1482|NK2 homeobox 5##DQ893313|NKX2-5|1482|NK2 homeobox 5##DQ894104|NKX2-5|1482|NK2 homeobox 5##DQ896627|NKX2-5|1482|NK2 homeobox 5##BC025711|NKX2-5|1482|NK2 homeobox 5##AK290615|NKX2-5|1482|NK2 homeobox 5##AK307249|NKX2-5|1482|NK2 homeobox 5##AK297844|NKX2-5|1482|NK2 homeobox 5##AK307218|NKX2-5|1482|NK2 homeobox 5##AK309495|NKX2-5|1482|NK2 homeobox 5##U34962|NKX2-5|1482|NK2 homeobox 5##AK307247|NKX2-5|1482|NK2 homeobox 5##NM_001166175|NKX2-5|1482|NK2 homeobox 5##NM_001166176|NKX2-5|1482|NK2 homeobox 5##NM_004387|NKX2-5|1482|NK2 homeobox 5##NM_001205|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013978|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013979|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013980|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##BC010959|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083957|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083958|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##U15172|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083956|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AY216799|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AK297424|C5orf41|153222|chromosome 5 open reading frame 41##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2##AK095891|STC2|8614|stanniocalcin 2##NM_003714|STC2|8614|stanniocalcin 2	0.992568	CTCF.p2:-13:0.993
chr13	43545026	43545159	reg1007993.p1	12.209	+	NM_182508 AK310859 AK098238 BC093659 BC112237	-189368	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	-396758	+	BC040889 NM_033012	-408221	+	CU692822 DQ892268 DQ895469 TSC_hg19_v1_chr13_-_43566378 AL831953 AF396928 BC023660 AK313877 AK292461 NM_001002264 NM_033255	21278	-	AF126743 AY248898 NM_013238	52257	+	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	52610	+	NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##DQ892268|EPSTI1|94240|epithelial stromal interaction 1 (breast)##DQ895469|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AL831953|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AF396928|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC023660|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK313877|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK292461|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_001002264|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_033255|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AF126743|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY248898|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_013238|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15	0.092474	
chr4	154004709	154004835	reg1005816.p2	12.209	+	NM_033393 AB051514	-140582	+	TSC_hg19_v1_chr4_+_153701117 AK290472 U52521 BC103759 BC105114 BC105116 BC143675 BC143676 AK096509	-303645	+	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	-303751	+	BC011052 NM_001130067	69497	+	TSC_hg19_v1_chr4_+_154125594 AK308731 NM_015271 AB011089 AF220018	120833	+	TSC_hg19_v1_chr4_+_154178530 BC025417	173767	+	NM_033393|FHDC1|85462|FH2 domain containing 1##AB051514|FHDC1|85462|FH2 domain containing 1##AK290472|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##U52521|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC103759|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105114|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105116|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143675|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143676|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK096509|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC011052|TRIM2|23321|tripartite motif containing 2##NM_001130067|TRIM2|23321|tripartite motif containing 2##AK308731|TRIM2|23321|tripartite motif containing 2##NM_015271|TRIM2|23321|tripartite motif containing 2##AB011089|TRIM2|23321|tripartite motif containing 2##AF220018|TRIM2|23321|tripartite motif containing 2##BC025417|TRIM2|23321|tripartite motif containing 2	0.975042	CTCF.p2:2:0.975
chr4	87419870	87420006	reg1006372.p1	12.208	+	NM_002753 U07620 BC051731 AK225974 TSC_hg19_v1_chr4_-_87374361	-45615	-	NM_138980 NM_138982	-138564	-	BC022492 TSC_hg19_v1_chr4_-_87281197 BC035057	-138742	-	TSC_hg19_v1_chr4_+_87515468 AK056151 NM_006264 NM_080683 NM_080684 NM_080685 BC139915 U12132 U12129 U12130	95535	+	AJ583502 BC107051 BC107052 EF437223 NM_197965	350403	-	BC016746 BC063410 NM_144645	393622	-	NM_002753|MAPK10|5602|mitogen-activated protein kinase 10##U07620|MAPK10|5602|mitogen-activated protein kinase 10##BC051731|MAPK10|5602|mitogen-activated protein kinase 10##AK225974|MAPK10|5602|mitogen-activated protein kinase 10##NM_138980|MAPK10|5602|mitogen-activated protein kinase 10##NM_138982|MAPK10|5602|mitogen-activated protein kinase 10##BC022492|MAPK10|5602|mitogen-activated protein kinase 10##BC035057|MAPK10|5602|mitogen-activated protein kinase 10##AK056151|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_006264|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080683|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080684|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080685|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##BC139915|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##U12132|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##U12129|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##AJ583502|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC107051|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC107052|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##EF437223|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##NM_197965|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC016746|C4orf36|132989|chromosome 4 open reading frame 36##BC063410|C4orf36|132989|chromosome 4 open reading frame 36##NM_144645|C4orf36|132989|chromosome 4 open reading frame 36	0.036469	
chr10	70310641	70310780	reg1009055.p1	12.206	+	TSC_hg19_v1_chr10_-_70287249 NM_152707	-23441	-	CU688872 DQ891710 DQ894887 TSC_hg19_v1_chr10_-_70287246 AK298510 M31659 AK290255 BC030266 AK295287	-23521	-	AK308333 NM_001080449 TSC_hg19_v1_chr10_-_70231752 BC111740	-78907	-	TSC_hg19_v1_chr10_+_70320093 NM_030625	9373	+	TSC_hg19_v1_chr10_+_70480995 AF465616 AK023438 NM_018237 AK307550 AK298004 BC058846 AK001701 AY249140 AK122871 AK292649 AK299307 AK307704 AK307671 BX647943 BC130626 BC132725 BC144118 BC108682	170273	+	BC026036 BC089420 TSC_hg19_v1_chr10_+_70482298	171553	+	NM_152707|SLC25A16|8034|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16##DQ891710|SLC25A16|8034|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16##DQ894887|SLC25A16|8034|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16##AK298510|SLC25A16|8034|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16##M31659|SLC25A16|8034|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16##AK290255|SLC25A16|8034|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16##BC030266|SLC25A16|8034|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16##AK295287|SLC25A16|8034|solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16##AK308333|DNA2|1763|DNA replication helicase 2 homolog (yeast)##NM_001080449|DNA2|1763|DNA replication helicase 2 homolog (yeast)##BC111740|DNA2|1763|DNA replication helicase 2 homolog (yeast)##NM_030625|TET1|80312|tet methylcytosine dioxygenase 1##AF465616|CCAR1|55749|cell division cycle and apoptosis regulator 1##AK023438|CCAR1|55749|cell division cycle and apoptosis regulator 1##NM_018237|CCAR1|55749|cell division cycle and apoptosis regulator 1##AK307550|CCAR1|55749|cell division cycle and apoptosis regulator 1##AK298004|CCAR1|55749|cell division cycle and apoptosis regulator 1##BC058846|CCAR1|55749|cell division cycle and apoptosis regulator 1##AK001701|CCAR1|55749|cell division cycle and apoptosis regulator 1##AY249140|CCAR1|55749|cell division cycle and apoptosis regulator 1##AK122871|CCAR1|55749|cell division cycle and apoptosis regulator 1##AK292649|CCAR1|55749|cell division cycle and apoptosis regulator 1##AK299307|CCAR1|55749|cell division cycle and apoptosis regulator 1##AK307704|CCAR1|55749|cell division cycle and apoptosis regulator 1##AK307671|CCAR1|55749|cell division cycle and apoptosis regulator 1##BX647943|CCAR1|55749|cell division cycle and apoptosis regulator 1##BC130626|CCAR1|55749|cell division cycle and apoptosis regulator 1##BC132725|CCAR1|55749|cell division cycle and apoptosis regulator 1##BC144118|CCAR1|55749|cell division cycle and apoptosis regulator 1##BC108682|CCAR1|55749|cell division cycle and apoptosis regulator 1##BC026036|CCAR1|55749|cell division cycle and apoptosis regulator 1##BC089420|CCAR1|55749|cell division cycle and apoptosis regulator 1	0.0	
chr12	116191053	116191185	reg1006679.p1	12.205	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-1068979	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1344901	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1347195	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	523831	-	TSC_hg19_v1_chr12_-_116715263 AY338463	524041	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	780110	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.990587	CTCF.p2:6:0.991
chr19	19097656	19097801	reg1008502.p1	12.204	+	TSC_hg19_v1_chr19_-_19052045 NM_004838	-45690	-	TSC_hg19_v1_chr19_-_19052010 BC012113	-45774	-	AK313995 NM_001145722 AF093265 NM_001145721	-46592	-	TSC_hg19_v1_chr19_-_19144296 AL832488	46552	-	AK074842 TSC_hg19_v1_chr19_-_19144306 BX647813	46578	-	TSC_hg19_v1_chr19_-_19144327 AK291275 AL832587 AF518874 NM_001017392 NM_014884	46624	-	NM_004838|HOMER3|9454|homer homolog 3 (Drosophila)##BC012113|HOMER3|9454|homer homolog 3 (Drosophila)##AK313995|HOMER3|9454|homer homolog 3 (Drosophila)##NM_001145722|HOMER3|9454|homer homolog 3 (Drosophila)##AF093265|HOMER3|9454|homer homolog 3 (Drosophila)##NM_001145721|HOMER3|9454|homer homolog 3 (Drosophila)##AL832488|SUGP2|10147|SURP and G patch domain containing 2##AK074842|SUGP2|10147|SURP and G patch domain containing 2##BX647813|SUGP2|10147|SURP and G patch domain containing 2##AK291275|SUGP2|10147|SURP and G patch domain containing 2##AF518874|SUGP2|10147|SURP and G patch domain containing 2##NM_001017392|SUGP2|10147|SURP and G patch domain containing 2##NM_014884|SUGP2|10147|SURP and G patch domain containing 2	0.0	
chr20	23216158	23216321	reg1006574.p2	12.204	+	AB527124 AM393282 AM393752 DQ891055 DQ894234 TSC_hg19_v1_chr20_-_23066962 AJ295142 AB209895 BC028075 AK299957 NM_012072 U94333	-149306	-	TSC_hg19_v1_chr20_-_23062805 AK056764	-153427	-	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	-186001	-	BC003410 NM_013248 TSC_hg19_v1_chr20_+_23331435 AK026360 BC000759 BC003029 AF156957 BC002687	115205	+	AK295362 TSC_hg19_v1_chr20_+_23342818 AK056477 AK293942 AK314599	126574	+	TSC_hg19_v1_chr20_+_23342853 AK289814	126620	+	AM393282|CD93|22918|CD93 molecule##AM393752|CD93|22918|CD93 molecule##DQ891055|CD93|22918|CD93 molecule##DQ894234|CD93|22918|CD93 molecule##AJ295142|CD93|22918|CD93 molecule##AB209895|CD93|22918|CD93 molecule##BC028075|CD93|22918|CD93 molecule##AK299957|CD93|22918|CD93 molecule##NM_012072|CD93|22918|CD93 molecule##U94333|CD93|22918|CD93 molecule##AK056764|CD93|22918|CD93 molecule##BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##BC003410|NXT1|29107|NTF2-like export factor 1##NM_013248|NXT1|29107|NTF2-like export factor 1##AK026360|NXT1|29107|NTF2-like export factor 1##BC000759|NXT1|29107|NTF2-like export factor 1##BC003029|NXT1|29107|NTF2-like export factor 1##AF156957|NXT1|29107|NTF2-like export factor 1##BC002687|NXT1|29107|NTF2-like export factor 1##AK295362|GZF1|64412|GDNF-inducible zinc finger protein 1##AK056477|GZF1|64412|GDNF-inducible zinc finger protein 1##AK293942|GZF1|64412|GDNF-inducible zinc finger protein 1##AK314599|GZF1|64412|GDNF-inducible zinc finger protein 1##AK289814|GZF1|64412|GDNF-inducible zinc finger protein 1	0.014051	
chr13	32484150	32484302	reg1006338.p1	12.203	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-63324	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-170513	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-710016	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	121215	+	BC146956 BC146965 NM_001136571	401863	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	405391	+	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset	0.996986	CTCF.p2:0:0.997
chr20	42077736	42077869	reg1008414.p1	12.203	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	-259292	-	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-1830741	-	AB089149 NM_052846	-2082305	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	8690	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	8801	+	TSC_hg19_v1_chr20_+_42136336 NM_032107 AK299199	58542	+	AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6##NM_032107|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK299199|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)	0.99916	CTCF.p2:-7:0.999
chr2	232539644	232539785	reg1006661.p1	12.203	+	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	-82097	+	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	-144560	-	BC033054 TSC_hg19_v1_chr2_-_232379076	-160632	-	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	33520	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	33618	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	106211	-	NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta	0.938013	CTCF.p2:3:0.938
chr8	22613667	22613804	reg1003764.p1	12.203	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-62951	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-63230	-	AK294968 AK295834 NM_001199881	-63661	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	171589	-	AK092617 BC034917 NM_001160036	231188	+	NM_001160037	239625	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.886023	CTCF.p2:10:0.886
chr1	41134662	41134799	reg1007608.p1	12.202	+	D87074 NM_014747 TSC_hg19_v1_chr1_-_41131355	-3387	-	TSC_hg19_v1_chr1_-_41131126 BC003103	-3596	-	TSC_hg19_v1_chr1_+_40997324 BC091518	-137418	+	NM_001142587 NM_001142588 NM_001142589 NM_014223 TSC_hg19_v1_chr1_+_41157288	22542	+	TSC_hg19_v1_chr1_+_41157365 AK301215 AK301385 Z70024 Z74792	22627	+	BC005003 TSC_hg19_v1_chr1_+_41157398	22665	+	D87074|RIMS3|9783|regulating synaptic membrane exocytosis 3##NM_014747|RIMS3|9783|regulating synaptic membrane exocytosis 3##BC003103|RIMS3|9783|regulating synaptic membrane exocytosis 3##BC091518|ZNF684|127396|zinc finger protein 684##NM_001142587|NFYC|4802|nuclear transcription factor Y, gamma##NM_001142588|NFYC|4802|nuclear transcription factor Y, gamma##NM_001142589|NFYC|4802|nuclear transcription factor Y, gamma##NM_014223|NFYC|4802|nuclear transcription factor Y, gamma##AK301215|NFYC|4802|nuclear transcription factor Y, gamma##AK301385|NFYC|4802|nuclear transcription factor Y, gamma##Z70024|NFYC|4802|nuclear transcription factor Y, gamma##Z74792|NFYC|4802|nuclear transcription factor Y, gamma##BC005003|NFYC|4802|nuclear transcription factor Y, gamma	0.044891	
chr21	35734273	35734385	reg1005508.p1	12.202	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	-288400	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	-288488	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-446237	-	AF302095 DQ192290 NM_172201 BC112087 BC093892	2017	+	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	13496	+	AY789480 NM_001127670 EU008570	93743	-	AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1	0.998936	CTCF.p2:-3:0.999
chr16	50058885	50059005	reg1006694.p1	12.201	+	NM_015069	-198028	-	BC021181 BC021718 NM_144602 CU676858	-651117	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-743211	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	195	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	40948	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	41015	+	NM_015069|ZNF423|23090|zinc finger protein 423##BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3	0.0	
chr8	103826942	103827077	reg1006316.p2	12.201	+	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	-159077	-	BC011538 NM_001032282 S81439	-160917	-	NM_024410 AK315276 BC104456 BC104457	-263148	+	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	49350	-	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	49386	-	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	206258	+	AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1##BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1	0.066092	
chr19	15666767	15666890	reg1003672.p1	12.200	+	NM_173483 AK096820	-47493	+	BC136551 BC136552 BC144238 AF384856 AY358156 TSC_hg19_v1_chr19_-_15590313 AK289415 AB073610 AK055882 NM_052890	-76569	-	AK024488 TSC_hg19_v1_chr19_-_15575356 AK122587 NM_022904	-91461	-	AK300530 AK300539 NM_007253 AK300478 AK096809 AK314685	59201	+	AB002454 AK296761 AK296802 AK298675 AK316136 NM_000896 NM_001199208 NM_001199209 AK304200 BC136299 D12620 D12621	84895	+	NM_023944 AK304138 TSC_hg19_v1_chr19_+_15783896 AK304389 AK075435 AL832171 BC035350 AY358977 AB035130 AB035131	117044	+	NM_173483|CYP4F22|126410|cytochrome P450, family 4, subfamily F, polypeptide 22##AK096820|CYP4F22|126410|cytochrome P450, family 4, subfamily F, polypeptide 22##BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2##BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2##BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2##AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2##AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2##AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2##AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2##AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2##NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2##AK024488|RASAL3|64926|RAS protein activator like 3##AK122587|RASAL3|64926|RAS protein activator like 3##NM_022904|RASAL3|64926|RAS protein activator like 3##AK300530|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK300539|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##NM_007253|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK300478|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK096809|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK314685|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AB002454|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK296761|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK296802|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK298675|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK316136|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_000896|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_001199208|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_001199209|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK304200|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##BC136299|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##D12620|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##D12621|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_023944|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK304138|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK304389|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK075435|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AL832171|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##BC035350|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AY358977|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AB035130|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AB035131|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12	0.971176	CTCF.p2:6:0.971
chr2	54931935	54932077	reg1006647.p2	12.200	+	TSC_hg19_v1_chr2_+_54785519 AF327441 NM_178313 BC137282 BC137283	-146441	+	TSC_hg19_v1_chr2_+_54684338 BC032061	-247639	+	TSC_hg19_v1_chr2_+_54683463 NM_003128 AB371586 AB209748	-248394	+	NM_001039753	20142	+	TSC_hg19_v1_chr2_-_55199899 BC131571	267902	-	AJ251385 AM392753 AM393122 AM393280 AM393537 BC139928 DQ778739 AF087901 BC014366 TSC_hg19_v1_chr2_-_55237387 BC007109 AF177332 AF132048 BC001035 AF077050 AF125103 NM_007008 AY102276	305366	-	AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_001039753|EML6|400954|echinoderm microtubule associated protein like 6##AJ251385|RTN4|57142|reticulon 4##AM392753|RTN4|57142|reticulon 4##AM393122|RTN4|57142|reticulon 4##AM393280|RTN4|57142|reticulon 4##AM393537|RTN4|57142|reticulon 4##BC139928|RTN4|57142|reticulon 4##DQ778739|RTN4|57142|reticulon 4##AF087901|RTN4|57142|reticulon 4##BC014366|RTN4|57142|reticulon 4##BC007109|RTN4|57142|reticulon 4##AF177332|RTN4|57142|reticulon 4##AF132048|RTN4|57142|reticulon 4##BC001035|RTN4|57142|reticulon 4##AF077050|RTN4|57142|reticulon 4##AF125103|RTN4|57142|reticulon 4##NM_007008|RTN4|57142|reticulon 4##AY102276|RTN4|57142|reticulon 4	0.794746	CTCF.p2:23:0.795
chr6	24581441	24581552	reg1006003.p1	12.200	+	TSC_hg19_v1_chr6_+_24495196 AK314357 BC034321 NM_001080 NM_170740 DQ891671 DQ894857 AJ427355 Y11192	-86301	+	TSC_hg19_v1_chr6_+_24495080 AK290800 AK294699 AK315380	-86418	+	L11702 CU676688 AY007546 BC093645 BC112001 L11701 AK310692 BC020748 NM_177483 AJ308108 NM_001503	-91703	-	AK310289 NM_001252328	1958	-	AK296310 AK295008 AK307503 AK296426 BC140821 BC144628 NM_001168375 NM_001168376 TSC_hg19_v1_chr6_-_24646374 AB002317 BC152460 NM_001168374 NM_001168377 NM_014809	64672	-	AJ420495 TSC_hg19_v1_chr6_-_24667106 AK296623 AB587417 AK002168 EU446614 BC110375 AF223469 AJ269473 AF201687 BC017553 NM_016614 AK308836	85474	-	AK314357|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##BC034321|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_001080|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_170740|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ891671|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ894857|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AJ427355|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##Y11192|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK290800|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK294699|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK315380|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##L11702|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AY007546|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC093645|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC112001|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##L11701|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310692|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC020748|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_177483|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AJ308108|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_001503|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310289|KIAA0319|9856|KIAA0319##NM_001252328|KIAA0319|9856|KIAA0319##AK296310|KIAA0319|9856|KIAA0319##AK295008|KIAA0319|9856|KIAA0319##AK307503|KIAA0319|9856|KIAA0319##AK296426|KIAA0319|9856|KIAA0319##BC140821|KIAA0319|9856|KIAA0319##BC144628|KIAA0319|9856|KIAA0319##NM_001168375|KIAA0319|9856|KIAA0319##NM_001168376|KIAA0319|9856|KIAA0319##AB002317|KIAA0319|9856|KIAA0319##BC152460|KIAA0319|9856|KIAA0319##NM_001168374|KIAA0319|9856|KIAA0319##NM_001168377|KIAA0319|9856|KIAA0319##NM_014809|KIAA0319|9856|KIAA0319##AJ420495|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK296623|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK002168|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##EU446614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC110375|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF223469|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AJ269473|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF201687|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC017553|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##NM_016614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK308836|TDP2|51567|tyrosyl-DNA phosphodiesterase 2	0.999603	CTCF.p2:2:1.000
chr9	34591808	34591916	reg1006159.p1	12.200	+	NM_001207011 TSC_hg19_v1_chr9_-_34590150	-1712	-	TSC_hg19_v1_chr9_-_34589723 BC001492 M73238 NM_001842 NM_147164	-2123	-	TSC_hg19_v1_chr9_-_34522975 BC022101 NM_198573	-68858	-	BC032136 NM_148178 NM_148179	20230	-	AB463589 CR541889 CU674154 DQ891980 EU176665 TSC_hg19_v1_chr9_-_34620472 BC000319 BC003004 AF082513	28609	-	TSC_hg19_v1_chr9_-_34620483 BC107697 AK314730	28623	-	NM_001207011|CNTFR|1271|ciliary neurotrophic factor receptor##BC001492|CNTFR|1271|ciliary neurotrophic factor receptor##M73238|CNTFR|1271|ciliary neurotrophic factor receptor##NM_001842|CNTFR|1271|ciliary neurotrophic factor receptor##NM_147164|CNTFR|1271|ciliary neurotrophic factor receptor##BC022101|ENHO|375704|energy homeostasis associated##NM_198573|ENHO|375704|energy homeostasis associated##BC032136|C9orf23|138716|chromosome 9 open reading frame 23##NM_148178|C9orf23|138716|chromosome 9 open reading frame 23##NM_148179|C9orf23|138716|chromosome 9 open reading frame 23##CR541889|DCTN3|11258|dynactin 3 (p22)##DQ891980|DCTN3|11258|dynactin 3 (p22)##EU176665|DCTN3|11258|dynactin 3 (p22)##BC000319|DCTN3|11258|dynactin 3 (p22)##BC003004|DCTN3|11258|dynactin 3 (p22)##AF082513|DCTN3|11258|dynactin 3 (p22)##BC107697|DCTN3|11258|dynactin 3 (p22)##AK314730|DCTN3|11258|dynactin 3 (p22)	0.228383	
chr19	18521492	18521630	reg1005318.p1	12.199	+	BC025744 TSC_hg19_v1_chr19_-_18508433 NM_145256 BC053659 BC033825	-13141	-	TSC_hg19_v1_chr19_+_18496967 AB000584 AK225425 AK225431 AK291530 NM_004864 BC008962 U88323 BC000529 AF019770 U51731 BT019465	-24579	+	TSC_hg19_v1_chr19_+_18451449 AK289968 NM_017712 AK294497 BC042138 BC028063 AJ278828 AK000215	-70154	+	TSC_hg19_v1_chr19_+_18530163 NM_001009998 NM_032627	8566	+	TSC_hg19_v1_chr19_+_18530224 BC000274 AK098429	8664	+	TSC_hg19_v1_chr19_+_18530425 CU674122 AB464208	8879	+	BC025744|LRRC25|126364|leucine rich repeat containing 25##NM_145256|LRRC25|126364|leucine rich repeat containing 25##BC053659|LRRC25|126364|leucine rich repeat containing 25##BC033825|LRRC25|126364|leucine rich repeat containing 25##AB000584|GDF15|9518|growth differentiation factor 15##AK225431|GDF15|9518|growth differentiation factor 15##AK291530|GDF15|9518|growth differentiation factor 15##NM_004864|GDF15|9518|growth differentiation factor 15##BC008962|GDF15|9518|growth differentiation factor 15##U88323|GDF15|9518|growth differentiation factor 15##BC000529|GDF15|9518|growth differentiation factor 15##AF019770|GDF15|9518|growth differentiation factor 15##U51731|GDF15|9518|growth differentiation factor 15##BT019465|GDF15|9518|growth differentiation factor 15##AK289968|PGPEP1|54858|pyroglutamyl-peptidase I##NM_017712|PGPEP1|54858|pyroglutamyl-peptidase I##AK294497|PGPEP1|54858|pyroglutamyl-peptidase I##BC042138|PGPEP1|54858|pyroglutamyl-peptidase I##BC028063|PGPEP1|54858|pyroglutamyl-peptidase I##AJ278828|PGPEP1|54858|pyroglutamyl-peptidase I##AK000215|PGPEP1|54858|pyroglutamyl-peptidase I##NM_001009998|SSBP4|170463|single stranded DNA binding protein 4##NM_032627|SSBP4|170463|single stranded DNA binding protein 4##BC000274|SSBP4|170463|single stranded DNA binding protein 4##AK098429|SSBP4|170463|single stranded DNA binding protein 4	0.981215	CTCF.p2:36:0.981
chr21	39724658	39724779	reg1005213.p2	12.199	+	NM_170737	-80290	+	D87291 NM_170736 AK292812	-95789	+	BC013327 NM_002243	-96055	+	AB489170 AM392572 CU691828 EU446470 AK304662 AK303518 BC040168 AK300395 NM_001136155 NM_182918	145647	-	M21535 NM_001243429	232127	-	TSC_hg19_v1_chr21_-_40032563 AK309469 NM_001243428	307858	-	NM_170737|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##M21535|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243429|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK309469|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243428|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	0.309811	CTCF.p2:16:0.310
chr12	85969614	85969747	reg1007887.p1	12.198	+	U31986 TSC_hg19_v1_chr12_+_85673999 BC010923 NM_006982	-295721	+	AK022365 NM_001079910 BC005399 BC093088 AK307799	-539557	+	AK126325 NM_001100917	-539626	-	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	260365	-	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	260557	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	298446	+	U31986|ALX1|8092|ALX homeobox 1##BC010923|ALX1|8092|ALX homeobox 1##NM_006982|ALX1|8092|ALX homeobox 1##AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK126325|TSPAN19|144448|tetraspanin 19##NM_001100917|TSPAN19|144448|tetraspanin 19##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin	0.992047	CTCF.p2:-11:0.992
chr22	46390850	46390966	reg1006175.p1	12.197	+	AF416743 NM_058238 TSC_hg19_v1_chr22_-_46373045	-17879	-	CR456568 TSC_hg19_v1_chr22_+_46067931 AK095309 CR457381 DQ893240 DQ896570	-322991	+	AK025734 TSC_hg19_v1_chr22_+_46067746 AF119662 BC007508	-323152	+	TSC_hg19_v1_chr22_+_46449736 BC036832	58816	+	AB528792 AK001807 NM_018280 TSC_hg19_v1_chr22_-_46450052	59104	-	NM_001001928 NM_005036 AY258330 TSC_hg19_v1_chr22_+_46546555 AY258328	155622	+	AF416743|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_058238|WNT7B|7477|wingless-type MMTV integration site family, member 7B##CR456568|ATXN10|25814|ataxin 10##AK095309|ATXN10|25814|ataxin 10##CR457381|ATXN10|25814|ataxin 10##DQ893240|ATXN10|25814|ataxin 10##DQ896570|ATXN10|25814|ataxin 10##AK025734|ATXN10|25814|ataxin 10##AF119662|ATXN10|25814|ataxin 10##BC007508|ATXN10|25814|ataxin 10##AK001807|C22orf26|55267|chromosome 22 open reading frame 26##NM_018280|C22orf26|55267|chromosome 22 open reading frame 26##NM_001001928|PPARA|5465|peroxisome proliferator-activated receptor alpha##NM_005036|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258330|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258328|PPARA|5465|peroxisome proliferator-activated receptor alpha	0.999464	CTCF.p2:-12:0.999
chr4	171510886	171511046	reg1007324.p1	12.197	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-499552	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-499768	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-563461	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	1223678	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	2578986	+	BC043556 TSC_hg19_v1_chr4_-_174090314	2579344	-	BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.533934	CTCF.p2:-48:0.534
chr6	44042395	44042508	reg1006058.p2	12.197	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	-74077	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-303581	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-303917	+	CR627460 TSC_hg19_v1_chr6_+_44094741	52247	+	TSC_hg19_v1_chr6_-_44095161 AK312086	52709	-	TSC_hg19_v1_chr6_-_44095190 NM_032111	52747	-	BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14##NM_032111|MRPL14|64928|mitochondrial ribosomal protein L14	0.999885	CTCF.p2:9:1.000
chr7	54841972	54842096	reg1006279.p2	12.195	+	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	-15113	-	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	-15155	-	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	-231952	+	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	244711	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	244912	+	AK095857 NM_018697	591106	+	AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit##NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor##AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	0.974977	CTCF.p2:-10:0.975
chr9	128170373	128170485	reg1005566.p1	12.195	+	TSC_hg19_v1_chr9_+_128024122 AK056493 NM_015635 AB040954 BC114937 BC114962	-146280	+	TSC_hg19_v1_chr9_+_128024104 BC110990	-146325	+	TSC_hg19_v1_chr9_+_128024097 AK296381	-146331	+	TSC_hg19_v1_chr9_-_128469297 M37191	298881	-	TSC_hg19_v1_chr9_-_128469466 AK290060	299038	-	AL833042 TSC_hg19_v1_chr9_-_128469485 AY633624 AY633625 AY633626 BC002326 BC003044	299050	-	AK056493|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##NM_015635|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AB040954|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114937|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114962|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC110990|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AK296381|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##M37191|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AK290060|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AL833042|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633624|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633625|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633626|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC002326|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC003044|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1	0.795014	CTCF.p2:-2:0.795
chr3	158977972	158978100	reg1006496.p1	12.194	+	TSC_hg19_v1_chr3_+_158787146 BC137464 BC137469 BC144658	-190885	+	NM_001042705 NM_001042706 NM_001197100 NM_001197113 NM_001197114 AK309049 DQ309553 DQ309554 TSC_hg19_v1_chr3_+_158787130 AK096479	-190949	+	TSC_hg19_v1_chr3_+_158519925 AK301680	-458102	+	BC036535 NM_001197107 NM_001197108 NM_014575 TSC_hg19_v1_chr3_+_158991047	13006	+	TSC_hg19_v1_chr3_+_158991090 AK314662	13055	+	TSC_hg19_v1_chr3_+_159481881 AK309223	503926	+	BC137464|IQCJ|654502|IQ motif containing J##BC137469|IQCJ|654502|IQ motif containing J##BC144658|IQCJ|654502|IQ motif containing J##NM_001042705|IQCJ|654502|IQ motif containing J##NM_001042706|IQCJ|654502|IQ motif containing J##NM_001197100|IQCJ|654502|IQ motif containing J##NM_001197113|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##NM_001197114|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##AK309049|IQCJ|654502|IQ motif containing J##DQ309553|IQCJ|654502|IQ motif containing J##DQ309554|IQCJ|654502|IQ motif containing J##AK096479|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##AK301680|MFSD1|64747|major facilitator superfamily domain containing 1##BC036535|SCHIP1|29970|schwannomin interacting protein 1##NM_001197107|SCHIP1|29970|schwannomin interacting protein 1##NM_001197108|SCHIP1|29970|schwannomin interacting protein 1##NM_014575|SCHIP1|29970|schwannomin interacting protein 1##AK314662|SCHIP1|29970|schwannomin interacting protein 1##AK309223|SCHIP1|29970|schwannomin interacting protein 1	0.997624	CTCF.p2:10:0.998
chr6	20292033	20292187	reg1008546.p1	12.194	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	-79438	-	TSC_hg19_v1_chr6_+_19838612 AF085889	-453427	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	-454475	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	109993	+	CR749285 NM_001243076	111923	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	242613	+	BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1	0.998282	CTCF.p2:-9:0.998
chr8	6658360	6658498	reg1008073.p1	12.194	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	-92246	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	-92489	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	-92538	+	AY534243 AY358489 AY534242 NM_207411	34663	-	BC033298 BC047677 X92744 U73945 NM_005218	77054	-	M98331 BC093951 BC093953 BC069667 BC069710 BC069728 BC069769 NM_001926	125156	-	AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AY534243|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY358489|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY534242|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##NM_207411|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##BC033298|DEFB1|1672|defensin, beta 1##BC047677|DEFB1|1672|defensin, beta 1##X92744|DEFB1|1672|defensin, beta 1##U73945|DEFB1|1672|defensin, beta 1##NM_005218|DEFB1|1672|defensin, beta 1##M98331|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093951|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093953|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069667|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069710|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069728|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069769|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##NM_001926|DEFA6|1671|defensin, alpha 6, Paneth cell-specific	0.999885	CTCF.p2:0:1.000
chrX	114960488	114960649	reg1006409.p1	12.194	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-132700	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-163526	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-164962	+	BC003645 TSC_hg19_v1_chrX_-_115085443	124871	-	AK313927 NM_000686 X87723 U16957	341427	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	607199	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:21:0.429
chr12	29705410	29705521	reg1006074.p1	12.193	+	NM_183378	-54847	-	TSC_hg19_v1_chr12_-_29534109 AF183410 AF216751 AF302767 BC000887 BC107794 NM_016570	-171350	-	AK222799 TSC_hg19_v1_chr12_-_29534084 AL834128	-171382	-	TSC_hg19_v1_chr12_-_29936844 GQ865601 NM_001193451	231305	-	BC042083 NM_175861	232226	-	AK302260 NM_001190995	1124695	-	NM_183378|OVCH1|341350|ovochymase 1##AF183410|ERGIC2|51290|ERGIC and golgi 2##AF216751|ERGIC2|51290|ERGIC and golgi 2##AF302767|ERGIC2|51290|ERGIC and golgi 2##BC000887|ERGIC2|51290|ERGIC and golgi 2##BC107794|ERGIC2|51290|ERGIC and golgi 2##NM_016570|ERGIC2|51290|ERGIC and golgi 2##AK222799|ERGIC2|51290|ERGIC and golgi 2##AL834128|ERGIC2|51290|ERGIC and golgi 2##GQ865601|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_001193451|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##BC042083|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_175861|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##AK302260|IPO8|10526|importin 8##NM_001190995|IPO8|10526|importin 8	0.956478	CTCF.p2:0:0.956
chr2	65780504	65780643	reg1008184.p1	12.193	+	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	-116736	+	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	-120897	-	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	-121361	-	AL832770 BC043503 NM_002398	881950	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	882267	+	TSC_hg19_v1_chr2_+_66666452 AK297109	885877	+	AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein##BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AL832770|MEIS1|4211|Meis homeobox 1##BC043503|MEIS1|4211|Meis homeobox 1##NM_002398|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##AK297109|MEIS1|4211|Meis homeobox 1	0.978443	CTCF.p2:3:0.978
chr17	1026426	1026539	reg1006040.p1	12.192	+	AK295191 TSC_hg19_v1_chr17_-_1012323 NM_001092 BC036807	-14173	-	TSC_hg19_v1_chr17_-_982210 AK299909	-44257	-	TSC_hg19_v1_chr17_+_900368 BC002324 NM_013337 AK000830 AK225453 AF155330	-126127	+	TSC_hg19_v1_chr17_-_1029059 AK307827	2592	-	AK302682 AB384846 TSC_hg19_v1_chr17_-_1083048 NM_021962 U01147	56587	-	TSC_hg19_v1_chr17_-_1090565 AK126882 AK124547 NM_001159746	64106	-	AK295191|ABR|29|active BCR-related gene##NM_001092|ABR|29|active BCR-related gene##BC036807|ABR|29|active BCR-related gene##AK299909|ABR|29|active BCR-related gene##BC002324|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##NM_013337|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK000830|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK225453|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AF155330|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK307827|ABR|29|active BCR-related gene##AK302682|ABR|29|active BCR-related gene##NM_021962|ABR|29|active BCR-related gene##U01147|ABR|29|active BCR-related gene##AK126882|ABR|29|active BCR-related gene##AK124547|ABR|29|active BCR-related gene##NM_001159746|ABR|29|active BCR-related gene	0.643283	CTCF.p2:-5:0.643
chr3	195351613	195351741	reg1007516.p1	12.192	+	TSC_hg19_v1_chr3_-_195310989 NM_001647	-40647	-	J02611 BC007402 TSC_hg19_v1_chr3_-_195310812 AK312090 AK294523	-40847	-	TSC_hg19_v1_chr3_-_195306274 BT019860 BT019861 CR456838 CR541773 CU675645 DQ892668 DQ896124	-45375	-	BC053551 TSC_hg19_v1_chr3_+_195384934 BC062438 AK299148 AK057553 AK316025	33252	+	TSC_hg19_v1_chr3_+_195384941 BC073879 AK300421 BC064564 AK074764	33277	+	TSC_hg19_v1_chr3_+_195447752 NM_152673 AK311504	96078	+	NM_001647|APOD|347|apolipoprotein D##J02611|APOD|347|apolipoprotein D##BC007402|APOD|347|apolipoprotein D##AK312090|APOD|347|apolipoprotein D##AK294523|APOD|347|apolipoprotein D##BT019860|APOD|347|apolipoprotein D##BT019861|APOD|347|apolipoprotein D##CR456838|APOD|347|apolipoprotein D##CR541773|APOD|347|apolipoprotein D##DQ892668|APOD|347|apolipoprotein D##DQ896124|APOD|347|apolipoprotein D##BC053551|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##BC062438|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK299148|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AK057553|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK316025|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##BC073879|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##BC064564|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK074764|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##NM_152673|MUC20|200958|mucin 20, cell surface associated##AK311504|MUC20|200958|mucin 20, cell surface associated	0.841806	CTCF.p2:9:0.842
chr3	126241258	126241363	reg1005963.p1	12.191	+	AK055862 BC115405 BC115406 TSC_hg19_v1_chr3_-_126236597 AB075869 NM_001165974 NM_144639	-4705	-	DQ079590 NM_001040653 NM_025112 TSC_hg19_v1_chr3_-_126194793	-46521	-	TSC_hg19_v1_chr3_-_126194735 AY936556	-46585	-	TSC_hg19_v1_chr3_+_126242997 NM_152889	1724	+	TSC_hg19_v1_chr3_+_126243167 AY120869 BC103895 BC103896 BC103897	1906	+	TSC_hg19_v1_chr3_+_126261188 BC045257 BC047236 BC039390	19882	+	AK055862|UROC1|131669|urocanase domain containing 1##BC115405|UROC1|131669|urocanase domain containing 1##BC115406|UROC1|131669|urocanase domain containing 1##AB075869|UROC1|131669|urocanase domain containing 1##NM_001165974|UROC1|131669|urocanase domain containing 1##NM_144639|UROC1|131669|urocanase domain containing 1##DQ079590|ZXDC|79364|ZXD family zinc finger C##NM_001040653|ZXDC|79364|ZXD family zinc finger C##NM_025112|ZXDC|79364|ZXD family zinc finger C##AY936556|ZXDC|79364|ZXD family zinc finger C##NM_152889|CHST13|166012|carbohydrate (chondroitin 4) sulfotransferase 13##AY120869|CHST13|166012|carbohydrate (chondroitin 4) sulfotransferase 13##BC103895|CHST13|166012|carbohydrate (chondroitin 4) sulfotransferase 13##BC103896|CHST13|166012|carbohydrate (chondroitin 4) sulfotransferase 13##BC103897|CHST13|166012|carbohydrate (chondroitin 4) sulfotransferase 13##BC045257|CHST13|166012|carbohydrate (chondroitin 4) sulfotransferase 13##BC047236|CHST13|166012|carbohydrate (chondroitin 4) sulfotransferase 13##BC039390|CHST13|166012|carbohydrate (chondroitin 4) sulfotransferase 13	0.999966	CTCF.p2:-4:1.000
chr15	48644769	48644907	reg1008075.p1	12.190	+	TSC_hg19_v1_chr15_+_48624363 AK291515 NM_001948 AK312122 U31930 U62891 L11877 AB049113 M89913 DQ891191 DQ894375 CR541720 CR541781	-20437	+	TSC_hg19_v1_chr15_+_48623625 NM_001025248 NM_001025249 AK000629 BC070339 BC110377 AK298464 U90223 AB528727	-21174	+	NM_000338 NM_001184832 AK129998 AK298312 BC020860	-146341	+	TSC_hg19_v1_chr15_-_48937070 L13923	292245	-	TSC_hg19_v1_chr15_-_48937907 BC146854 AK304737 BC094721 NM_000138 X63556	293091	-	BC117182 TSC_hg19_v1_chr15_-_49103277 AB020719 BC069186 AK303805 BX648822 BC107721 NM_001194998 NM_014985	458424	-	AK291515|DUT|1854|deoxyuridine triphosphatase##NM_001948|DUT|1854|deoxyuridine triphosphatase##AK312122|DUT|1854|deoxyuridine triphosphatase##U31930|DUT|1854|deoxyuridine triphosphatase##U62891|DUT|1854|deoxyuridine triphosphatase##L11877|DUT|1854|deoxyuridine triphosphatase##AB049113|DUT|1854|deoxyuridine triphosphatase##M89913|DUT|1854|deoxyuridine triphosphatase##DQ891191|DUT|1854|deoxyuridine triphosphatase##DQ894375|DUT|1854|deoxyuridine triphosphatase##CR541720|DUT|1854|deoxyuridine triphosphatase##CR541781|DUT|1854|deoxyuridine triphosphatase##NM_001025248|DUT|1854|deoxyuridine triphosphatase##NM_001025249|DUT|1854|deoxyuridine triphosphatase##AK000629|DUT|1854|deoxyuridine triphosphatase##BC070339|DUT|1854|deoxyuridine triphosphatase##BC110377|DUT|1854|deoxyuridine triphosphatase##AK298464|DUT|1854|deoxyuridine triphosphatase##U90223|DUT|1854|deoxyuridine triphosphatase##NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##L13923|FBN1|2200|fibrillin 1##BC146854|FBN1|2200|fibrillin 1##AK304737|FBN1|2200|fibrillin 1##BC094721|FBN1|2200|fibrillin 1##NM_000138|FBN1|2200|fibrillin 1##X63556|FBN1|2200|fibrillin 1##BC117182|CEP152|22995|centrosomal protein 152kDa##AB020719|CEP152|22995|centrosomal protein 152kDa##BC069186|CEP152|22995|centrosomal protein 152kDa##AK303805|CEP152|22995|centrosomal protein 152kDa##BX648822|CEP152|22995|centrosomal protein 152kDa##BC107721|CEP152|22995|centrosomal protein 152kDa##NM_001194998|CEP152|22995|centrosomal protein 152kDa##NM_014985|CEP152|22995|centrosomal protein 152kDa	0.999114	CTCF.p2:8:0.999
chr5	175378724	175378843	reg1007190.p1	12.190	+	TSC_hg19_v1_chr5_+_175308843 AL512758 AK126590	-69858	+	TSC_hg19_v1_chr5_+_175298607 AK293819	-80173	+	TSC_hg19_v1_chr5_+_175298551 AK314177	-80238	+	TSC_hg19_v1_chr5_-_175395273 BC068499 BC066325 BC006849	16369	-	NM_032361	16761	-	BC028606 NM_001079529	133095	+	AL512758|CPLX2|10814|complexin 2##AK126590|CPLX2|10814|complexin 2##AK293819|CPLX2|10814|complexin 2##AK314177|CPLX2|10814|complexin 2##BC068499|THOC3|84321|THO complex 3##BC066325|THOC3|84321|THO complex 3##BC006849|THOC3|84321|THO complex 3##NM_032361|THOC3|84321|THO complex 3##BC028606|FAM153B|202134|family with sequence similarity 153, member B##NM_001079529|FAM153B|202134|family with sequence similarity 153, member B	0.995842	CTCF.p2:10:0.996
chr1	11710595	11710721	reg1008281.p1	12.189	+	TSC_hg19_v1_chr1_+_11539211 AB593117 AK311332 AB037758 NM_020780	-171423	+	TSC_hg19_v1_chr1_+_11333566 BC004468 BT006832	-377113	+	TSC_hg19_v1_chr1_+_11333254 AK222808 NM_013319 AK074890 AF117064	-377342	+	AB463629 CR542110 CU692940 DQ892848 DQ892849 DQ896095 TSC_hg19_v1_chr1_-_11714417	3748	-	AK055344 NM_183412	3773	+	BC025233 TSC_hg19_v1_chr1_-_11714487 AK313019 BC096747 BC014957	3830	-	AB593117|PTCHD2|57540|patched domain containing 2##AB037758|PTCHD2|57540|patched domain containing 2##NM_020780|PTCHD2|57540|patched domain containing 2##BC004468|UBIAD1|29914|UbiA prenyltransferase domain containing 1##BT006832|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK222808|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_013319|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK074890|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AF117064|UBIAD1|29914|UbiA prenyltransferase domain containing 1##CR542110|FBXO2|26232|F-box protein 2##DQ892848|FBXO2|26232|F-box protein 2##DQ892849|FBXO2|26232|F-box protein 2##DQ896095|FBXO2|26232|F-box protein 2##AK055344|FBXO44|93611|F-box protein 44##NM_183412|FBXO44|93611|F-box protein 44##BC025233|FBXO2|26232|F-box protein 2##AK313019|FBXO2|26232|F-box protein 2##BC096747|FBXO2|26232|F-box protein 2##BC014957|FBXO2|26232|F-box protein 2	0.112386	
chr22	24819768	24819895	reg1005818.p1	12.189	+	TSC_hg19_v1_chr22_+_24666804 NM_001145468 NM_015330 AK097129 AK301482 AB209022 AL832425 BC005093 BC136471	-152991	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	-178852	-	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	-242387	+	TSC_hg19_v1_chr22_+_24819870 EU036694	49	+	NM_000675 AK123058 EU036693 AK301420 BC013780	3734	+	AK314727 CR627429 CR456375 NM_016327 BC131703 TSC_hg19_v1_chr22_+_24891299 AF163312 AB013885 BC033388 AB528843 BC139840 BC139843 CU013080 CU013368	71410	+	NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##EU036694|ADORA2A|135|adenosine A2a receptor##NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor##AK314727|UPB1|51733|ureidopropionase, beta##CR627429|UPB1|51733|ureidopropionase, beta##CR456375|UPB1|51733|ureidopropionase, beta##NM_016327|UPB1|51733|ureidopropionase, beta##BC131703|UPB1|51733|ureidopropionase, beta##AF163312|UPB1|51733|ureidopropionase, beta##AB013885|UPB1|51733|ureidopropionase, beta##BC033388|UPB1|51733|ureidopropionase, beta##BC139840|UPB1|51733|ureidopropionase, beta##BC139843|UPB1|51733|ureidopropionase, beta##CU013080|UPB1|51733|ureidopropionase, beta##CU013368|UPB1|51733|ureidopropionase, beta	0.995983	CTCF.p2:14:0.996
chr7	16604620	16604748	reg1007641.p1	12.189	+	NM_001195280	-38180	+	AB059270 CU678977 AB590718 AK315682 BC008484 AF361494 NM_015464	-99302	-	NM_001101417 NM_001101426	-143738	-	TSC_hg19_v1_chr7_-_16685370 AK023704 AL050390 AK001740 BC035353 AK001389 NM_020319	80717	-	TSC_hg19_v1_chr7_+_16685813 AF083246 NM_001159767 NM_014038 BC009597 AK001218 AK001260 BC008453 BC107757 AK300655 BC051898 BC003056	81110	+	TSC_hg19_v1_chr7_+_16793401 AK093487 NM_014399 AK026587 AK075475 AK316595 AY358995 AF100759 BC033863 AF120265 DQ892059 DQ895252 CR542107	188772	+	NM_001195280|LRRC72|100506049|leucine rich repeat containing 72##AB059270|SOSTDC1|25928|sclerostin domain containing 1##AK315682|SOSTDC1|25928|sclerostin domain containing 1##BC008484|SOSTDC1|25928|sclerostin domain containing 1##AF361494|SOSTDC1|25928|sclerostin domain containing 1##NM_015464|SOSTDC1|25928|sclerostin domain containing 1##NM_001101417|ISPD|729920|isoprenoid synthase domain containing##NM_001101426|ISPD|729920|isoprenoid synthase domain containing##AK023704|ANKMY2|57037|ankyrin repeat and MYND domain containing 2##AL050390|ANKMY2|57037|ankyrin repeat and MYND domain containing 2##AK001740|ANKMY2|57037|ankyrin repeat and MYND domain containing 2##BC035353|ANKMY2|57037|ankyrin repeat and MYND domain containing 2##AK001389|ANKMY2|57037|ankyrin repeat and MYND domain containing 2##NM_020319|ANKMY2|57037|ankyrin repeat and MYND domain containing 2##AF083246|BZW2|28969|basic leucine zipper and W2 domains 2##NM_001159767|BZW2|28969|basic leucine zipper and W2 domains 2##NM_014038|BZW2|28969|basic leucine zipper and W2 domains 2##BC009597|BZW2|28969|basic leucine zipper and W2 domains 2##AK001218|BZW2|28969|basic leucine zipper and W2 domains 2##AK001260|BZW2|28969|basic leucine zipper and W2 domains 2##BC008453|BZW2|28969|basic leucine zipper and W2 domains 2##BC107757|BZW2|28969|basic leucine zipper and W2 domains 2##AK300655|BZW2|28969|basic leucine zipper and W2 domains 2##BC051898|BZW2|28969|basic leucine zipper and W2 domains 2##BC003056|BZW2|28969|basic leucine zipper and W2 domains 2##AK093487|TSPAN13|27075|tetraspanin 13##NM_014399|TSPAN13|27075|tetraspanin 13##AK026587|TSPAN13|27075|tetraspanin 13##AK075475|TSPAN13|27075|tetraspanin 13##AK316595|TSPAN13|27075|tetraspanin 13##AY358995|TSPAN13|27075|tetraspanin 13##AF100759|TSPAN13|27075|tetraspanin 13##BC033863|TSPAN13|27075|tetraspanin 13##AF120265|TSPAN13|27075|tetraspanin 13##DQ892059|TSPAN13|27075|tetraspanin 13##DQ895252|TSPAN13|27075|tetraspanin 13##CR542107|TSPAN13|27075|tetraspanin 13	0.998054	CTCF.p2:15:0.998
chr16	60950	61089	reg1006739.p2	12.188	+	None	None	None	None	None	None	None	None	None	BC001381 TSC_hg19_v1_chr16_+_103106	42040	+	TSC_hg19_v1_chr16_-_103609 AB587374 DQ896281 EU176418 BC011932 AF060223 AF051316 NM_016310	42612	-	TSC_hg19_v1_chr16_+_103838 NM_024571	42819	+	BC001381|SNRNP25|79622|small nuclear ribonucleoprotein 25kDa (U11/U12)##DQ896281|POLR3K|51728|polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa##EU176418|POLR3K|51728|polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa##BC011932|POLR3K|51728|polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa##AF060223|POLR3K|51728|polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa##AF051316|POLR3K|51728|polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa##NM_016310|POLR3K|51728|polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa##NM_024571|SNRNP25|79622|small nuclear ribonucleoprotein 25kDa (U11/U12)	2.079305	CTCF.p2:-47:0.999	CTCF.p2:-105:1.000
chr15	68966462	68966580	reg1006302.p1	12.187	+	AK289678 NM_001190457	-42195	+	NM_001190456	-57643	+	TSC_hg19_v1_chr15_+_68871402 NM_006091	-95178	+	AB463390 AY349171 BC106719 BC125143 BT007436 DQ893294 DQ896729 U60823 TSC_hg19_v1_chr15_-_69113208 U73477 X75090 AK223280	146628	-	TSC_hg19_v1_chr15_-_69113235 BC007200 BC000608 AF025684 AK312703	146706	-	TSC_hg19_v1_chr15_-_69113264 NM_006305	146739	-	AK289678|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190457|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##AY349171|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC106719|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC125143|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BT007436|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ893294|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ896729|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U60823|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U73477|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##X75090|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK223280|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC007200|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC000608|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AF025684|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK312703|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##NM_006305|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	0.999156	CTCF.p2:1:0.999
chr17	59467430	59467531	reg1006672.p1	12.187	+	TSC_hg19_v1_chr17_+_58755255 NM_001099432 NM_017679 AK304791 AK225757 BC017390 AK314744 AF361219 BC117275 BC143386 BC143387 AK025510	-712267	+	TSC_hg19_v1_chr17_+_58677710 BC016480 BC042418 BC032826 BC033893 DQ891047 EU176552 BT009780	-789791	+	TSC_hg19_v1_chr17_+_58677553 BC060877 NM_003620 AK312902 AK299773 U78305	-789936	+	TSC_hg19_v1_chr17_+_59477203 BC052566 NM_005994 AK127429 BC070054	9756	+	TSC_hg19_v1_chr17_+_59477477 U28049	10016	+	TSC_hg19_v1_chr17_+_59477713 AL832900 AB209378	10237	+	NM_001099432|BCAS3|54828|breast carcinoma amplified sequence 3##NM_017679|BCAS3|54828|breast carcinoma amplified sequence 3##AK304791|BCAS3|54828|breast carcinoma amplified sequence 3##AK225757|BCAS3|54828|breast carcinoma amplified sequence 3##BC017390|BCAS3|54828|breast carcinoma amplified sequence 3##AK314744|BCAS3|54828|breast carcinoma amplified sequence 3##AF361219|BCAS3|54828|breast carcinoma amplified sequence 3##BC117275|BCAS3|54828|breast carcinoma amplified sequence 3##BC143386|BCAS3|54828|breast carcinoma amplified sequence 3##BC143387|BCAS3|54828|breast carcinoma amplified sequence 3##AK025510|BCAS3|54828|breast carcinoma amplified sequence 3##BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC052566|TBX2|6909|T-box 2##NM_005994|TBX2|6909|T-box 2##BC070054|TBX2|6909|T-box 2##U28049|TBX2|6909|T-box 2##AL832900|TBX2|6909|T-box 2##AB209378|TBX2|6909|T-box 2	0.838647	CTCF.p2:5:0.839
chr10	105241788	105241905	reg1007064.p1	12.186	+	BC043367 NM_001129742	-2850	-	BC036193 BC036208 NM_001001412	-23201	-	TSC_hg19_v1_chr10_-_105212166 AK022195 NM_015916	-29683	-	NM_004210 U87864	11888	+	AK299620 TSC_hg19_v1_chr10_+_105344798	102921	+	AB385330 TSC_hg19_v1_chr10_-_105420936	179062	-	BC043367|CALHM3|119395|calcium homeostasis modulator 3##NM_001129742|CALHM3|119395|calcium homeostasis modulator 3##BC036193|CALHM1|255022|calcium homeostasis modulator 1##BC036208|CALHM1|255022|calcium homeostasis modulator 1##NM_001001412|CALHM1|255022|calcium homeostasis modulator 1##AK022195|CALHM2|51063|calcium homeostasis modulator 2##NM_015916|CALHM2|51063|calcium homeostasis modulator 2##NM_004210|NEURL|9148|neuralized homolog (Drosophila)##U87864|NEURL|9148|neuralized homolog (Drosophila)##AK299620|NEURL|9148|neuralized homolog (Drosophila)	0.780271	CTCF.p2:1:0.780
chr11	65393568	65393711	reg1007206.p1	12.186	+	TSC_hg19_v1_chr11_+_65383657 NM_032223	-9933	+	TSC_hg19_v1_chr11_-_65382764 AK092015 AX747311	-10863	-	TSC_hg19_v1_chr11_-_65381782 AK310986	-11831	-	TSC_hg19_v1_chr11_+_65405586 NM_006747 AF029789 AK308234 BC110353 BC010492	11943	+	AB005666 NM_153253	13952	+	TSC_hg19_v1_chr11_+_65408222 AK310068	14616	+	NM_032223|PCNXL3|399909|pecanex-like 3 (Drosophila)##AK092015|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##NM_006747|SIPA1|6494|signal-induced proliferation-associated 1##AF029789|SIPA1|6494|signal-induced proliferation-associated 1##AK308234|SIPA1|6494|signal-induced proliferation-associated 1##BC110353|SIPA1|6494|signal-induced proliferation-associated 1##BC010492|SIPA1|6494|signal-induced proliferation-associated 1##AB005666|SIPA1|6494|signal-induced proliferation-associated 1##NM_153253|SIPA1|6494|signal-induced proliferation-associated 1##AK310068|SIPA1|6494|signal-induced proliferation-associated 1	1.010411	CTCF.p2:-17:0.999
chr5	150180732	150180882	reg1008854.p1	12.186	+	TSC_hg19_v1_chr5_+_150158318 AK027847 BC082259 AF313413 BC009719	-22453	+	AK125286 NM_032947	-23300	+	CU693212 DQ892339 DQ895544 TSC_hg19_v1_chr5_-_150138580 AF195120 AK000299 AK296787 BC026323 AK025873 AK311693 AK307757 NM_001135643 NM_016221	-42202	-	EU742619 NM_001145805	45277	+	BC117248 BC032607 DQ908918 TSC_hg19_v1_chr5_-_150284372	103526	-	AF395541 TSC_hg19_v1_chr5_-_150284395	103591	-	AK027847|C5orf62|85027|chromosome 5 open reading frame 62##AF313413|C5orf62|85027|chromosome 5 open reading frame 62##BC009719|C5orf62|85027|chromosome 5 open reading frame 62##AK125286|C5orf62|85027|chromosome 5 open reading frame 62##NM_032947|C5orf62|85027|chromosome 5 open reading frame 62##DQ892339|DCTN4|51164|dynactin 4 (p62)##DQ895544|DCTN4|51164|dynactin 4 (p62)##AF195120|DCTN4|51164|dynactin 4 (p62)##AK000299|DCTN4|51164|dynactin 4 (p62)##AK296787|DCTN4|51164|dynactin 4 (p62)##BC026323|DCTN4|51164|dynactin 4 (p62)##AK311693|DCTN4|51164|dynactin 4 (p62)##AK307757|DCTN4|51164|dynactin 4 (p62)##NM_001135643|DCTN4|51164|dynactin 4 (p62)##NM_016221|DCTN4|51164|dynactin 4 (p62)##EU742619|IRGM|345611|immunity-related GTPase family, M##NM_001145805|IRGM|345611|immunity-related GTPase family, M##BC117248|ZNF300|91975|zinc finger protein 300##BC032607|ZNF300|91975|zinc finger protein 300##DQ908918|ZNF300|91975|zinc finger protein 300##AF395541|ZNF300|91975|zinc finger protein 300	0.992172	CTCF.p2:-7:0.992
chr1	158065672	158065794	reg1006077.p2	12.185	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	-102345	+	AY302131 NM_018240	-102671	+	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	-254171	-	BC027926 NM_001766	84003	+	AK225996 TSC_hg19_v1_chr1_+_158150684 AK310541 J04142 AK310749 AB590619 CU693322	85051	+	M28825 NM_001763	158193	+	BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##AY302131|KIRREL|55243|kin of IRRE like (Drosophila)##NM_018240|KIRREL|55243|kin of IRRE like (Drosophila)##DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule##AK225996|CD1D|912|CD1d molecule##J04142|CD1D|912|CD1d molecule##AK310749|CD1D|912|CD1d molecule##M28825|CD1A|909|CD1a molecule##NM_001763|CD1A|909|CD1a molecule	0.822034	CTCF.p2:-6:0.822
chr20	35241228	35241320	reg1006658.p1	12.185	+	TSC_hg19_v1_chr20_+_35234211 BC004446 BC001871 AF274936 S83364	-6970	+	TSC_hg19_v1_chr20_+_35234167 AF112213	-7111	+	TSC_hg19_v1_chr20_+_35234142 NM_001199534 NM_018840 NM_199483	-7164	+	BC042041 AK291513 NM_032214 NM_175077	33313	-	TSC_hg19_v1_chr20_-_35374488 AK027665 AK295466 AB044943 AF251054 AK023618 AK295420	133205	-	TSC_hg19_v1_chr20_-_35374542 NM_022477 NM_032013	133278	-	BC004446|C20orf24|55969|chromosome 20 open reading frame 24##BC001871|C20orf24|55969|chromosome 20 open reading frame 24##AF274936|C20orf24|55969|chromosome 20 open reading frame 24##S83364|C20orf24|55969|chromosome 20 open reading frame 24##AF112213|C20orf24|55969|chromosome 20 open reading frame 24##NM_001199534|C20orf24|55969|chromosome 20 open reading frame 24##NM_018840|C20orf24|55969|chromosome 20 open reading frame 24##NM_199483|C20orf24|55969|chromosome 20 open reading frame 24##BC042041|SLA2|84174|Src-like-adaptor 2##AK291513|SLA2|84174|Src-like-adaptor 2##NM_032214|SLA2|84174|Src-like-adaptor 2##NM_175077|SLA2|84174|Src-like-adaptor 2##AK027665|NDRG3|57446|NDRG family member 3##AK295466|NDRG3|57446|NDRG family member 3##AB044943|NDRG3|57446|NDRG family member 3##AK023618|NDRG3|57446|NDRG family member 3##AK295420|NDRG3|57446|NDRG family member 3##NM_022477|NDRG3|57446|NDRG family member 3##NM_032013|NDRG3|57446|NDRG family member 3	0.97757	CTCF.p2:2:0.978
chr11	122499805	122499919	reg1007905.p1	12.184	+	BC130361 BC130363 AF303179 NM_001001786	-513001	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-1038764	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-1176687	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	26685	+	BC070266 AK313578 AF001622 NM_019604	209367	+	AK097534 BC068507 NM_024806 NM_199124	253569	+	BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63	0.018158	
chr1	181007694	181007825	reg1006490.p2	12.184	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-4609	+	AF010446 AJ249778 BC012485 U22963 TSC_hg19_v1_chr1_+_181003139	-4620	+	AK304645 AK290374 TSC_hg19_v1_chr1_+_181003128 AK222910	-4658	+	NM_016545	49878	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	50106	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	444941	+	AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##AF010446|MR1|3140|major histocompatibility complex, class I-related##AJ249778|MR1|3140|major histocompatibility complex, class I-related##BC012485|MR1|3140|major histocompatibility complex, class I-related##U22963|MR1|3140|major histocompatibility complex, class I-related##AK304645|MR1|3140|major histocompatibility complex, class I-related##AK290374|MR1|3140|major histocompatibility complex, class I-related##AK222910|MR1|3140|major histocompatibility complex, class I-related##NM_016545|IER5|51278|immediate early response 5##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	0.964856	CTCF.p2:-8:0.965
chr12	103969178	103969291	reg1006031.p1	12.184	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	-79488	-	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-617142	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-617713	+	AY311388 AJ295695 NM_017564 AB052958	11827	+	AB032773 TSC_hg19_v1_chr12_-_104234857	265590	-	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	265745	-	AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3	0.091618	
chr12	120524812	120524925	reg1006215.p1	12.184	+	TSC_hg19_v1_chr12_+_120427616 AK129960 NM_207311 U88834	-97270	+	TSC_hg19_v1_chr12_-_120315112 AY209000 AY257469 BC008127 AY681966 NM_001206999 NM_007174	-209775	-	AK123136 TSC_hg19_v1_chr12_-_120241305	-283571	-	AF498960 BT020024 CR536486 CR541683 CU677517 DQ890586 DQ890603 DQ893750 AB528529 TSC_hg19_v1_chr12_-_120554547 X79781 AK304620	29633	-	TSC_hg19_v1_chr12_-_120554551 AK312538	29685	-	BC015931 TSC_hg19_v1_chr12_-_120554557	29689	-	AK129960|CCDC64|92558|coiled-coil domain containing 64##NM_207311|CCDC64|92558|coiled-coil domain containing 64##U88834|CCDC64|92558|coiled-coil domain containing 64##AY209000|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY257469|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##BC008127|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY681966|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_001206999|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_007174|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AK123136|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AF498960|RAB35|11021|RAB35, member RAS oncogene family##BT020024|RAB35|11021|RAB35, member RAS oncogene family##CR536486|RAB35|11021|RAB35, member RAS oncogene family##CR541683|RAB35|11021|RAB35, member RAS oncogene family##DQ890586|RAB35|11021|RAB35, member RAS oncogene family##DQ890603|RAB35|11021|RAB35, member RAS oncogene family##DQ893750|RAB35|11021|RAB35, member RAS oncogene family##X79781|RAB35|11021|RAB35, member RAS oncogene family##AK304620|RAB35|11021|RAB35, member RAS oncogene family##AK312538|RAB35|11021|RAB35, member RAS oncogene family##BC015931|RAB35|11021|RAB35, member RAS oncogene family	0.952129	CTCF.p2:3:0.952
chr19	45454952	45455079	reg1008559.p1	12.184	+	AF113884 TSC_hg19_v1_chr19_+_45452536	-2532	+	TSC_hg19_v1_chr19_+_45449242 NM_000483	-5780	+	AK126257 NM_001646 BC020723 EF371378	-9501	+	NM_001294 BC004865 TSC_hg19_v1_chr19_+_45458636 AK074935 AK223553 AF037339 AK075262	3605	+	TSC_hg19_v1_chr19_+_45458649 BC012359 BT007262 CU680306 DQ892236 DQ895436	3639	+	TSC_hg19_v1_chr19_+_45504729 M83221 NM_006509 BC028013 AK290594	49727	+	AF113884|APOC2|344|apolipoprotein C-II##NM_000483|APOC2|344|apolipoprotein C-II##AK126257|APOC4-APOC2|100533990|APOC4-APOC2 readthrough##NM_001646|APOC4|346|apolipoprotein C-IV##BC020723|APOC4|346|apolipoprotein C-IV##EF371378|APOC4|346|apolipoprotein C-IV##NM_001294|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##BC004865|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AK074935|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AK223553|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AF037339|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AK075262|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##BC012359|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##BT007262|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##DQ892236|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##DQ895436|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##M83221|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##NM_006509|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##BC028013|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##AK290594|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B	0.997096	CTCF.p2:2:0.997
chr7	134199447	134199562	reg1006191.p1	12.184	+	TSC_hg19_v1_chr7_-_134143878 AK313439 BC000260 NM_001628 AK311339	-55540	-	TSC_hg19_v1_chr7_-_134143853 AB209796 BT019859 CR450351 CR542203 CU675153 J04795 DQ890758 DQ892546 DQ893921 DQ895757 M34720 AF328729 J05474 J05017 BC010391 BC005387 X15414	-55671	-	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	-197717	-	AF524864 NM_020299 BC008837	12866	+	NM_001080538	34344	+	NM_001724 NM_199186 TSC_hg19_v1_chr7_+_134331586 BC017050 AK315439 AK097778 X04327	132081	+	AK313439|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC000260|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001628|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK311339|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AB209796|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BT019859|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR450351|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR542203|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J04795|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ890758|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ892546|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ893921|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ895757|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##M34720|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF328729|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05474|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05017|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC010391|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC005387|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##X15414|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_001080538|AKR1B15|441282|aldo-keto reductase family 1, member B15##NM_001724|BPGM|669|2,3-bisphosphoglycerate mutase##NM_199186|BPGM|669|2,3-bisphosphoglycerate mutase##BC017050|BPGM|669|2,3-bisphosphoglycerate mutase##AK315439|BPGM|669|2,3-bisphosphoglycerate mutase##AK097778|BPGM|669|2,3-bisphosphoglycerate mutase##X04327|BPGM|669|2,3-bisphosphoglycerate mutase	0.021453	
chr14	64811014	64811128	reg1006999.p1	12.183	+	NM_001040276 BX247957 TSC_hg19_v1_chr14_-_64805347	-5713	-	AF051427 AF051428 AF060555 NM_001040275 NM_001437	-49969	-	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	-61408	-	AK302747 NM_005956	43682	+	TSC_hg19_v1_chr14_+_64855070 AK095514 AK312361 BC050420 AK309266 BC009806 J04031 AB384767 DQ893634 DQ896853	44025	+	AK315336 NM_004857 BC057229	121189	+	NM_001040276|ESR2|2100|estrogen receptor 2 (ER beta)##BX247957|ESR2|2100|estrogen receptor 2 (ER beta)##AF051427|ESR2|2100|estrogen receptor 2 (ER beta)##AF051428|ESR2|2100|estrogen receptor 2 (ER beta)##AF060555|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001040275|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001437|ESR2|2100|estrogen receptor 2 (ER beta)##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)##AK302747|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_005956|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK312361|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC050420|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK309266|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC009806|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##J04031|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ893634|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ896853|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK315336|AKAP5|9495|A kinase (PRKA) anchor protein 5##NM_004857|AKAP5|9495|A kinase (PRKA) anchor protein 5##BC057229|AKAP5|9495|A kinase (PRKA) anchor protein 5	0.687401	CTCF.p2:-21:0.687
chr19	59025362	59025517	reg1007814.p1	12.183	+	AB527212 TSC_hg19_v1_chr19_-_59023360 AK298446 AK123036 NM_012254	-2062	-	AY280800 TSC_hg19_v1_chr19_+_58987792 AK000633 AY279351 NM_017908 BC017206 AK026153	-37656	+	AK092341 TSC_hg19_v1_chr19_+_58978664	-46772	+	BC024738 NM_032792 TSC_hg19_v1_chr19_-_59030968	5514	-	TSC_hg19_v1_chr19_-_59031178 AK130056 AK027392	5749	-	TSC_hg19_v1_chr19_+_59055826 AK225760 BC004978 NM_005762 BC052986	30393	+	AK298446|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##AK123036|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##NM_012254|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##AY280800|ZNF446|55663|zinc finger protein 446##AK000633|ZNF446|55663|zinc finger protein 446##AY279351|ZNF446|55663|zinc finger protein 446##NM_017908|ZNF446|55663|zinc finger protein 446##BC017206|ZNF446|55663|zinc finger protein 446##AK026153|ZNF446|55663|zinc finger protein 446##AK092341|ZNF324|25799|zinc finger protein 324##BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45##NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45##AK027392|ZBTB45|84878|zinc finger and BTB domain containing 45##AK225760|TRIM28|10155|tripartite motif containing 28##BC004978|TRIM28|10155|tripartite motif containing 28##NM_005762|TRIM28|10155|tripartite motif containing 28##BC052986|TRIM28|10155|tripartite motif containing 28	0.985989	CTCF.p2:4:0.986
chr5	135760693	135760812	reg1006498.p2	12.183	+	NM_001167576 NM_001167577 NM_020389	-59589	-	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-292168	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-292223	+	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	1073489	-	TSC_hg19_v1_chr5_-_136834420 AK094489	1073675	-	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	1074228	-	NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.972337	CTCF.p2:-2:0.972
chr11	61564797	61564925	reg1007555.p1	12.182	+	TSC_hg19_v1_chr11_+_61560405 AK312761	-4457	+	TSC_hg19_v1_chr11_+_61560382 AK301743 BC000323	-4489	+	NM_004111 X76771	-4733	+	CU675827 AF199596 AF226273 DQ890643 DQ893822 AK027427 BC007846 TSC_hg19_v1_chr11_-_61584328 AK222906 AF084558 AL512760 AK314199 AK027522	19440	-	AK074754 AK074819 TSC_hg19_v1_chr11_-_61584464 NM_013402	19628	-	TSC_hg19_v1_chr11_+_61595676 AF084559 NM_004265	30840	+	AK312761|FEN1|2237|flap structure-specific endonuclease 1##AK301743|FEN1|2237|flap structure-specific endonuclease 1##BC000323|FEN1|2237|flap structure-specific endonuclease 1##NM_004111|FEN1|2237|flap structure-specific endonuclease 1##X76771|FEN1|2237|flap structure-specific endonuclease 1##AF199596|FADS1|3992|fatty acid desaturase 1##AF226273|FADS1|3992|fatty acid desaturase 1##DQ890643|FADS1|3992|fatty acid desaturase 1##DQ893822|FADS1|3992|fatty acid desaturase 1##AK027427|FADS1|3992|fatty acid desaturase 1##BC007846|FADS1|3992|fatty acid desaturase 1##AK222906|FADS1|3992|fatty acid desaturase 1##AF084558|FADS1|3992|fatty acid desaturase 1##AL512760|FADS1|3992|fatty acid desaturase 1##AK314199|FADS1|3992|fatty acid desaturase 1##AK027522|FADS1|3992|fatty acid desaturase 1##AK074754|FADS1|3992|fatty acid desaturase 1##AK074819|FADS1|3992|fatty acid desaturase 1##NM_013402|FADS1|3992|fatty acid desaturase 1##AF084559|FADS2|9415|fatty acid desaturase 2##NM_004265|FADS2|9415|fatty acid desaturase 2	0.999824	CTCF.p2:-17:1.000
chr15	40337423	40337554	reg1005819.p1	12.182	+	TSC_hg19_v1_chr15_+_40331506 AK127696	-6010	+	AB451391 CU690086 TSC_hg19_v1_chr15_-_40331370 X73459 BC071716 U07857 BC100031 BC035495 BC051006 AB061546 NM_003134	-6136	-	TSC_hg19_v1_chr15_+_40294764 AK074361	-42692	+	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	60798	-	BC104983 BC104985 BC069328 BC069505 NM_033503 AK024472	61122	-	TSC_hg19_v1_chr15_-_40401076 BC060783 BC070043 NM_001003940	63607	-	AK127696|LOC100131089|100131089|uncharacterized LOC100131089##AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AK074361|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor##BC104983|BMF|90427|Bcl2 modifying factor##BC104985|BMF|90427|Bcl2 modifying factor##BC069328|BMF|90427|Bcl2 modifying factor##BC069505|BMF|90427|Bcl2 modifying factor##NM_033503|BMF|90427|Bcl2 modifying factor##AK024472|BMF|90427|Bcl2 modifying factor##BC060783|BMF|90427|Bcl2 modifying factor##BC070043|BMF|90427|Bcl2 modifying factor##NM_001003940|BMF|90427|Bcl2 modifying factor	0.650418	CTCF.p2:-10:0.650
chr1	85086673	85086825	reg1001739.p2	12.182	+	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-46643	-	TSC_hg19_v1_chr1_-_84972262 NM_005274	-114480	-	TSC_hg19_v1_chr1_-_84971888 AK312111	-114825	-	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	69327	-	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	272137	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	375959	-	M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##NM_005274|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AK312111|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2	0.940828	CTCF.p2:22:0.941
chr5	149903457	149903568	reg1006517.p1	12.182	+	AK292448 NM_001543 U36600	-15799	+	TSC_hg19_v1_chr5_+_149865341 AB209107	-38073	+	TSC_hg19_v1_chr5_-_149829301 BC003401 BC001126 BC006784 BC110792 AK312179 BC091474 NM_001025070 NM_001025071 NM_005617	-74221	-	TSC_hg19_v1_chr5_+_149980641 AL831818 NM_001166208	77130	+	AK127049 NM_001166209	93693	+	TSC_hg19_v1_chr5_+_150020221 NM_001109974 NM_007286 AK290178 BC042624 BC146665 AB028952 BC152538 BC142683 AF499136 AF499137	116781	+	AK292448|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##NM_001543|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##U36600|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##BC003401|RPS14|6208|ribosomal protein S14##BC001126|RPS14|6208|ribosomal protein S14##BC006784|RPS14|6208|ribosomal protein S14##BC110792|RPS14|6208|ribosomal protein S14##AK312179|RPS14|6208|ribosomal protein S14##BC091474|RPS14|6208|ribosomal protein S14##NM_001025070|RPS14|6208|ribosomal protein S14##NM_001025071|RPS14|6208|ribosomal protein S14##NM_005617|RPS14|6208|ribosomal protein S14##AL831818|SYNPO|11346|synaptopodin##NM_001166208|SYNPO|11346|synaptopodin##AK127049|SYNPO|11346|synaptopodin##NM_001166209|SYNPO|11346|synaptopodin##NM_001109974|SYNPO|11346|synaptopodin##NM_007286|SYNPO|11346|synaptopodin##AK290178|SYNPO|11346|synaptopodin##BC042624|SYNPO|11346|synaptopodin##BC146665|SYNPO|11346|synaptopodin##AB028952|SYNPO|11346|synaptopodin##BC152538|SYNPO|11346|synaptopodin##BC142683|SYNPO|11346|synaptopodin##AF499136|SYNPO|11346|synaptopodin##AF499137|SYNPO|11346|synaptopodin	0.98731	CTCF.p2:-7:0.987
chr9	18791211	18791352	reg1008537.p1	12.182	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	-317098	+	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	-317193	+	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	-1212185	+	BC033489 AK292245 AK057474 NM_153707	241938	-	TSC_hg19_v1_chr9_+_19049372 NM_006570	258082	+	TSC_hg19_v1_chr9_+_19049391 BC009990	258110	+	AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##BC033489|FAM154A|158297|family with sequence similarity 154, member A##AK292245|FAM154A|158297|family with sequence similarity 154, member A##AK057474|FAM154A|158297|family with sequence similarity 154, member A##NM_153707|FAM154A|158297|family with sequence similarity 154, member A##NM_006570|RRAGA|10670|Ras-related GTP binding A##BC009990|RRAGA|10670|Ras-related GTP binding A	0.131786	
chr11	30367769	30367906	reg1007127.p1	12.181	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	-23185	+	NM_000510 NM_001018080	-115275	+	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	-329306	-	CU689190 NM_001584 U57911	234142	-	TSC_hg19_v1_chr11_-_30605748 AK309809	237911	-	TSC_hg19_v1_chr11_-_30607762 AB209163 AK314833 NM_001145399	240008	-	AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_001584|MPPED2|744|metallophosphoesterase domain containing 2##U57911|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2##AB209163|MPPED2|744|metallophosphoesterase domain containing 2##AK314833|MPPED2|744|metallophosphoesterase domain containing 2##NM_001145399|MPPED2|744|metallophosphoesterase domain containing 2	0.992127	CTCF.p2:-8:0.992
chr13	81553311	81553439	reg1006551.p1	12.180	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-638311	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-640333	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-1497820	+	TSC_hg19_v1_chr13_-_84456424 BC051738	2903050	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	2903125	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	4820064	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.998667	CTCF.p2:-5:0.999
chr22	37657014	37657141	reg1008178.p1	12.180	+	TSC_hg19_v1_chr22_-_37640315 AK096924 BC001485 NM_002872	-16776	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	-16856	-	BC042068 NM_001051 AK291165	-48694	-	AF125349 AF075458 NM_013385 TSC_hg19_v1_chr22_+_37678513	21391	+	TSC_hg19_v1_chr22_+_37678548 AK304453 BC017780	21460	+	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	21499	+	AK096924|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BC001485|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##NM_002872|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF125349|CYTH4|27128|cytohesin 4##AF075458|CYTH4|27128|cytohesin 4##NM_013385|CYTH4|27128|cytohesin 4##AK304453|CYTH4|27128|cytohesin 4##BC017780|CYTH4|27128|cytohesin 4##BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4	0.989021	CTCF.p2:3:0.989
chr1	229617848	229617979	reg1005185.p2	12.179	+	TSC_hg19_v1_chr1_-_229569842 AK096902 AK300697 BC012597 BX648545 J00068 NM_001100	-48071	-	NM_145257 BC071609 TSC_hg19_v1_chr1_-_229478768	-139181	-	BC015419 TSC_hg19_v1_chr1_-_229478279 BC039241	-139614	-	AB384686 DQ894268 EU176236 AK092339 AK314431 AX747487 TSC_hg19_v1_chr1_-_229644075 BC020107 AK304861	26122	-	TSC_hg19_v1_chr1_-_229644079 AK001676 NM_018230 AK304061	26187	-	TSC_hg19_v1_chr1_-_229694431 AB013380 BC064930 AF216833 NM_012089	76515	-	AK096902|ACTA1|58|actin, alpha 1, skeletal muscle##AK300697|ACTA1|58|actin, alpha 1, skeletal muscle##BC012597|ACTA1|58|actin, alpha 1, skeletal muscle##BX648545|ACTA1|58|actin, alpha 1, skeletal muscle##J00068|ACTA1|58|actin, alpha 1, skeletal muscle##NM_001100|ACTA1|58|actin, alpha 1, skeletal muscle##NM_145257|C1orf96|126731|chromosome 1 open reading frame 96##BC071609|C1orf96|126731|chromosome 1 open reading frame 96##BC015419|C1orf96|126731|chromosome 1 open reading frame 96##BC039241|C1orf96|126731|chromosome 1 open reading frame 96##DQ894268|NUP133|55746|nucleoporin 133kDa##EU176236|NUP133|55746|nucleoporin 133kDa##AK092339|NUP133|55746|nucleoporin 133kDa##AK314431|NUP133|55746|nucleoporin 133kDa##BC020107|NUP133|55746|nucleoporin 133kDa##AK304861|NUP133|55746|nucleoporin 133kDa##AK001676|NUP133|55746|nucleoporin 133kDa##NM_018230|NUP133|55746|nucleoporin 133kDa##AK304061|NUP133|55746|nucleoporin 133kDa##AB013380|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##BC064930|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##AF216833|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##NM_012089|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10	0.999083	CTCF.p2:6:0.999
chr4	103352608	103352776	reg1006467.p1	12.179	+	TSC_hg19_v1_chr4_-_103266640 AF193052 BC012125 NM_001135146	-86058	-	TSC_hg19_v1_chr4_-_103266398 NM_001135147	-86290	-	TSC_hg19_v1_chr4_-_103266365 AB040120 NM_022154 AK304274	-86366	-	TSC_hg19_v1_chr4_-_103422436 BC033876	69763	-	TSC_hg19_v1_chr4_+_103422515 BC051765 NM_001165412 NM_003998	69806	+	TSC_hg19_v1_chr4_+_103422554 M58603	69863	+	AF193052|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##BC012125|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_001135146|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_001135147|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##BC051765|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##NM_001165412|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##NM_003998|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##M58603|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1	1.887074	CTCF.p2:5:0.857	CTCF.p2:74:0.996
chr4	129375529	129375686	reg1008238.p1	12.179	+	AK131272 NM_006320	-165624	-	TSC_hg19_v1_chr4_-_129208969 BC092478	-166616	-	AK091741 AX747155 TSC_hg19_v1_chr4_-_129208964 BC016692	-166643	-	TSC_hg19_v1_chr4_+_129730875 NM_024900 NM_199320 AK027620 AF520952 AK304815 AK127326	355263	+	TSC_hg19_v1_chr4_+_129732427 BC032376	356846	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	638983	-	AK131272|PGRMC2|10424|progesterone receptor membrane component 2##NM_006320|PGRMC2|10424|progesterone receptor membrane component 2##BC092478|PGRMC2|10424|progesterone receptor membrane component 2##AK091741|PGRMC2|10424|progesterone receptor membrane component 2##BC016692|PGRMC2|10424|progesterone receptor membrane component 2##NM_024900|PHF17|79960|PHD finger protein 17##NM_199320|PHF17|79960|PHD finger protein 17##AK027620|PHF17|79960|PHD finger protein 17##AF520952|PHF17|79960|PHD finger protein 17##AK304815|PHF17|79960|PHD finger protein 17##AK127326|PHF17|79960|PHD finger protein 17##BC032376|PHF17|79960|PHD finger protein 17##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1	0.46824	CTCF.p2:-13:0.468
chr17	65599232	65599359	reg1006765.p1	12.178	+	BC007905 NM_012417 NM_181671	-225372	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-225707	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-225886	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	114755	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	222407	+	AK293224 TSC_hg19_v1_chr17_+_65822221	222922	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.019667	
chr2	129079493	129079630	reg1006223.p2	12.178	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-3261	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-151514	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-230700	+	NM_032144 AL136727	1657674	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	1807297	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	1823050	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.773174	CTCF.p2:-32:0.714
chr6	97842146	97842271	reg1007963.p1	12.178	+	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	-111118	-	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	-469585	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-496444	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	1440372	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	1440464	+	TSC_hg19_v1_chr6_-_99395800 BC091484 BC032641	1553581	-	AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2##BC091484|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC032641|FBXL4|26235|F-box and leucine-rich repeat protein 4	0.980038	CTCF.p2:4:0.980
chr8	145288619	145288735	reg1005926.p2	12.176	+	AK295740 NM_001099280 NM_001099281 NM_032450 AK093563 AX748203 BC057824 BC067855 BC092486	-85749	+	BC003035 BC009915 NM_016458 AK098226 BC015471	-95982	+	TSC_hg19_v1_chr8_+_145159398 BC031273 BC018714 BC014082 AL136937	-129264	+	AX721087 NM_001008271 NM_001080514	32812	+	BC003035 BC009915 NM_016458 AK098226 BC015471	149226	+	AX721087 NM_001008271 NM_001080514	201898	+	AK295740|HEATR7A|727957|HEAT repeat containing 7A##NM_001099280|HEATR7A|727957|HEAT repeat containing 7A##NM_001099281|HEATR7A|727957|HEAT repeat containing 7A##NM_032450|HEATR7A|727957|HEAT repeat containing 7A##AK093563|HEATR7A|727957|HEAT repeat containing 7A##BC057824|HEATR7A|727957|HEAT repeat containing 7A##BC067855|HEATR7A|727957|HEAT repeat containing 7A##BC092486|HEATR7A|727957|HEAT repeat containing 7A##BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##BC031273|MAF1|84232|MAF1 homolog (S. cerevisiae)##BC018714|MAF1|84232|MAF1 homolog (S. cerevisiae)##BC014082|MAF1|84232|MAF1 homolog (S. cerevisiae)##AL136937|MAF1|84232|MAF1 homolog (S. cerevisiae)##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)	0.99632	CTCF.p2:-5:0.996
chrX	78705814	78705957	reg1007661.p1	12.176	+	AK313154 NM_001171581 NM_004867	-82858	-	CR456875 CU691874 EU446983 AY359051 AB209310 BC040437 BC010511 TSC_hg19_v1_chrX_-_78622829 AK223327 AK303238 AF038953 BC034485	-83102	-	AF345567 BC104922 BC104924 NM_032553	-279417	+	AK097514 NM_001109878 NM_001109879	564369	+	BC014194 NM_016954 AY035371 AB527983 CU680824	571869	+	AK128147 NM_001170574	885117	+	AK313154|ITM2A|9452|integral membrane protein 2A##NM_001171581|ITM2A|9452|integral membrane protein 2A##NM_004867|ITM2A|9452|integral membrane protein 2A##CR456875|ITM2A|9452|integral membrane protein 2A##EU446983|ITM2A|9452|integral membrane protein 2A##AY359051|ITM2A|9452|integral membrane protein 2A##AB209310|ITM2A|9452|integral membrane protein 2A##BC040437|ITM2A|9452|integral membrane protein 2A##BC010511|ITM2A|9452|integral membrane protein 2A##AK223327|ITM2A|9452|integral membrane protein 2A##AK303238|ITM2A|9452|integral membrane protein 2A##AF038953|ITM2A|9452|integral membrane protein 2A##BC034485|ITM2A|9452|integral membrane protein 2A##AF345567|GPR174|84636|G protein-coupled receptor 174##BC104922|GPR174|84636|G protein-coupled receptor 174##BC104924|GPR174|84636|G protein-coupled receptor 174##NM_032553|GPR174|84636|G protein-coupled receptor 174##AK097514|TBX22|50945|T-box 22##NM_001109878|TBX22|50945|T-box 22##NM_001109879|TBX22|50945|T-box 22##BC014194|TBX22|50945|T-box 22##NM_016954|TBX22|50945|T-box 22##AY035371|TBX22|50945|T-box 22##AK128147|FAM46D|169966|family with sequence similarity 46, member D##NM_001170574|FAM46D|169966|family with sequence similarity 46, member D	0.986464	CTCF.p2:18:0.986
chr5	79603510	79603612	reg1005951.p1	12.175	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	-51676	-	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-272397	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-316603	-	NM_032567 AK098575 AK314007 AF333098 BC033798	12254	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	100292	+	AY358256 NM_205548 BC142990 TSC_hg19_v1_chr5_+_79783828 BC131563	180272	+	BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AY358256|FAM151B|167555|family with sequence similarity 151, member B##NM_205548|FAM151B|167555|family with sequence similarity 151, member B##BC142990|FAM151B|167555|family with sequence similarity 151, member B##BC131563|FAM151B|167555|family with sequence similarity 151, member B	0.997297	CTCF.p2:-8:0.997
chr7	123438033	123438163	reg1006324.p1	12.175	+	TSC_hg19_v1_chr7_-_123389069 AM295156 CU690940 AB587496 BC013776 AK289795 D88460 CR749438 BC028602 BC052955 NM_003941	-49124	-	NM_207163 AK299434 AK299389 AK300698 AK309449 BC017911 BC062765 AK309496 AB591033	-142161	+	AF428257 BC100874 BC100875 BC100876 BC100877 NM_080928	-189005	+	AF009010 NM_012269	47124	+	NM_001174044 NM_003117 NM_153189 AY920278 AY920279 S67798 BC026163	127228	+	AK292229 NM_001174045 NM_001174046 AY920280 AY920281	127822	+	AM295156|WASL|8976|Wiskott-Aldrich syndrome-like##BC013776|WASL|8976|Wiskott-Aldrich syndrome-like##AK289795|WASL|8976|Wiskott-Aldrich syndrome-like##D88460|WASL|8976|Wiskott-Aldrich syndrome-like##CR749438|WASL|8976|Wiskott-Aldrich syndrome-like##BC028602|WASL|8976|Wiskott-Aldrich syndrome-like##BC052955|WASL|8976|Wiskott-Aldrich syndrome-like##NM_003941|WASL|8976|Wiskott-Aldrich syndrome-like##NM_207163|LMOD2|442721|leiomodin 2 (cardiac)##AK299434|LMOD2|442721|leiomodin 2 (cardiac)##AK299389|LMOD2|442721|leiomodin 2 (cardiac)##AK300698|LMOD2|442721|leiomodin 2 (cardiac)##BC017911|LMOD2|442721|leiomodin 2 (cardiac)##BC062765|LMOD2|442721|leiomodin 2 (cardiac)##AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15##NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15##AF009010|HYAL4|23553|hyaluronoglucosaminidase 4##NM_012269|HYAL4|23553|hyaluronoglucosaminidase 4##NM_001174044|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_003117|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_153189|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920278|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920279|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##S67798|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##BC026163|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AK292229|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174045|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174046|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920280|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920281|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)	0.992306	CTCF.p2:-27:0.992
chr7	120432194	120432304	reg1006465.p1	12.173	+	AK307139 AB028967 NM_012281	-518545	+	NM_019644 AK302407	-2567515	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-2608078	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	65771	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	65911	-	AK000096 NM_019071 NM_198267 TSC_hg19_v1_chr7_+_120590832 AF161419 BC009777 BC093091 AY007790 AK291905 AF074968 BC073865 AF180298 BC062634 BC093689 BC101609 BC143316 BC009776 BC010851 BC146417 BC153171 AB463778	158632	+	AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12##AK000096|ING3|54556|inhibitor of growth family, member 3##NM_019071|ING3|54556|inhibitor of growth family, member 3##NM_198267|ING3|54556|inhibitor of growth family, member 3##AF161419|ING3|54556|inhibitor of growth family, member 3##BC009777|ING3|54556|inhibitor of growth family, member 3##BC093091|ING3|54556|inhibitor of growth family, member 3##AY007790|ING3|54556|inhibitor of growth family, member 3##AK291905|ING3|54556|inhibitor of growth family, member 3##AF074968|ING3|54556|inhibitor of growth family, member 3##BC073865|ING3|54556|inhibitor of growth family, member 3##AF180298|ING3|54556|inhibitor of growth family, member 3##BC062634|ING3|54556|inhibitor of growth family, member 3##BC093689|ING3|54556|inhibitor of growth family, member 3##BC101609|ING3|54556|inhibitor of growth family, member 3##BC143316|ING3|54556|inhibitor of growth family, member 3##BC009776|ING3|54556|inhibitor of growth family, member 3##BC010851|ING3|54556|inhibitor of growth family, member 3##BC146417|ING3|54556|inhibitor of growth family, member 3##BC153171|ING3|54556|inhibitor of growth family, member 3	1.019708	CTCF.p2:6:0.999
chr8	82190087	82190211	reg1006394.p1	12.173	+	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	-165835	-	AK131274 NM_001033723	-403134	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-791665	+	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	2624	+	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	169520	-	AB528797 NM_001080526	183608	-	AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2##NM_001080526|FABP9|646480|fatty acid binding protein 9, testis	0.969184	CTCF.p2:-16:0.969
chr9	129064414	129064554	reg1008490.p1	12.173	+	AK309713 NM_001134778	-554007	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-554784	+	TSC_hg19_v1_chr9_-_128469506 AY524429 AY524430 AY524431 AY524432 NM_001006617 NM_001006618 NM_001006619 NM_001006620 NM_001006621 NM_024117	-594965	-	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	24683	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	312277	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	502826	+	AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##AY524429|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524430|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524431|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524432|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006617|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006618|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006619|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006620|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006621|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_024117|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43	0.961192	CTCF.p2:-11:0.961
chr5	81647770	81647892	reg1005009.p1	12.172	+	BC093982 BC112191 NM_001017971	-46666	+	TSC_hg19_v1_chr5_-_81574219 NM_001025	-73612	-	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	-73660	-	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	725366	-	TSC_hg19_v1_chr5_-_82373255 NM_174909	725431	-	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	725552	+	BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001025|RPS23|6228|ribosomal protein S23##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##NM_174909|TMEM167A|153339|transmembrane protein 167A##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4	0.683621	CTCF.p2:-19:0.684
chr17	4806974	4807116	reg1005299.p2	12.171	+	NM_000080 X66403	-677	-	AK309386 AK128415 NM_001145536	-4139	+	TSC_hg19_v1_chr17_+_4736660 NM_001024937 NM_015716 NM_153827 NM_170663 BC034673 AB209450 AB041926 BC094686 DQ891158 DQ894339 AB035698 AY775058	-70300	+	BC027955 NM_000173 J02940	28562	+	CR456834 CU677597 DQ891152 DQ894331 AK290376 TSC_hg19_v1_chr17_-_4843342 BC016294 AF070548 AK313010 BC006508 BC006519 BC017170 BC016473 NM_001165417 NM_001165418 NM_003562	36287	-	TSC_hg19_v1_chr17_+_4843617 AK025329 NM_015528	36567	+	NM_000080|CHRNE|1145|cholinergic receptor, nicotinic, epsilon##X66403|CHRNE|1145|cholinergic receptor, nicotinic, epsilon##AK309386|C17orf107|100130311|chromosome 17 open reading frame 107##AK128415|C17orf107|100130311|chromosome 17 open reading frame 107##NM_001145536|C17orf107|100130311|chromosome 17 open reading frame 107##NM_001024937|MINK1|50488|misshapen-like kinase 1##NM_015716|MINK1|50488|misshapen-like kinase 1##NM_153827|MINK1|50488|misshapen-like kinase 1##NM_170663|MINK1|50488|misshapen-like kinase 1##BC034673|MINK1|50488|misshapen-like kinase 1##AB209450|MINK1|50488|misshapen-like kinase 1##AB041926|MINK1|50488|misshapen-like kinase 1##BC094686|MINK1|50488|misshapen-like kinase 1##DQ891158|MINK1|50488|misshapen-like kinase 1##DQ894339|MINK1|50488|misshapen-like kinase 1##AB035698|MINK1|50488|misshapen-like kinase 1##AY775058|MINK1|50488|misshapen-like kinase 1##BC027955|GP1BA|2811|glycoprotein Ib (platelet), alpha polypeptide##NM_000173|GP1BA|2811|glycoprotein Ib (platelet), alpha polypeptide##J02940|GP1BA|2811|glycoprotein Ib (platelet), alpha polypeptide##CR456834|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##DQ891152|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##DQ894331|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##AK290376|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##BC016294|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##AF070548|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##AK313010|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##BC006508|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##BC006519|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##BC017170|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##BC016473|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##NM_001165417|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##NM_001165418|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##NM_003562|SLC25A11|8402|solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11##AK025329|RNF167|26001|ring finger protein 167##NM_015528|RNF167|26001|ring finger protein 167	0.999682	CTCF.p2:-2:1.000
chr2	13147127	13147279	reg1008431.p1	12.171	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-288806	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	-289287	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-289950	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	1625618	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	1625648	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	2554226	-	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence	0.993715	CTCF.p2:21:0.994
chrX	109129477	109129600	reg1007211.p1	12.171	+	TSC_hg19_v1_chrX_-_108976528 AB061713 AK292070 AF030555 NM_004458 NM_022977	-152974	-	TSC_hg19_v1_chrX_-_108976464 Y12777 Y13058 AB061714 BC034959 AK307566 AK294915	-153059	-	DQ891287 DQ894471 DQ896649 DQ896656 DQ896659 DQ896664 EF535525 BC035330 AJ012743 NM_012282 AK223306 AK314923 DQ192294 TSC_hg19_v1_chrX_-_108868398	-261214	-	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	116332	+	TSC_hg19_v1_chrX_+_109246341 NM_032227 AK026332	116802	+	TSC_hg19_v1_chrX_+_109246360 BC085605	116817	+	AB061713|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK292070|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AF030555|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_004458|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_022977|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y12777|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y13058|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061714|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##BC034959|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK307566|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK294915|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##DQ891287|KCNE1L|23630|KCNE1-like##DQ894471|KCNE1L|23630|KCNE1-like##DQ896649|KCNE1L|23630|KCNE1-like##DQ896656|KCNE1L|23630|KCNE1-like##DQ896659|KCNE1L|23630|KCNE1-like##DQ896664|KCNE1L|23630|KCNE1-like##EF535525|KCNE1L|23630|KCNE1-like##BC035330|KCNE1L|23630|KCNE1-like##AJ012743|KCNE1L|23630|KCNE1-like##NM_012282|KCNE1L|23630|KCNE1-like##AK223306|KCNE1L|23630|KCNE1-like##AK314923|KCNE1L|23630|KCNE1-like##DQ192294|KCNE1L|23630|KCNE1-like##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164##NM_032227|TMEM164|84187|transmembrane protein 164##AK026332|TMEM164|84187|transmembrane protein 164##BC085605|TMEM164|84187|transmembrane protein 164	0.997682	CTCF.p2:13:0.998
chr5	15003689	15003800	reg1005958.p2	12.170	+	DQ892588 DQ895806 AK222631 AK315012 BC014526 AF274753 AY358503 TSC_hg19_v1_chr5_-_14871888 AL833238 AB046801 BC009835 NM_054027	-131889	-	TSC_hg19_v1_chr5_+_14664826 BC015392	-338903	+	TSC_hg19_v1_chr5_+_14664772 NM_138348	-338968	+	TSC_hg19_v1_chr5_+_15500291 AB020647 NM_012304	496555	+	BC136424 TSC_hg19_v1_chr5_+_15500549	496800	+	BC075061 TSC_hg19_v1_chr5_+_15500760	497004	+	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)##DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)##AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)##AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)##BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)##AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)##AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)##AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)##BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)##NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)##BC015392|FAM105B|90268|family with sequence similarity 105, member B##NM_138348|FAM105B|90268|family with sequence similarity 105, member B##AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7	0.99412	CTCF.p2:-2:0.994
chrX	14057599	14057704	reg1005361.p1	12.170	+	BC003607 AK000521 BC014324 BC020785 NM_001042479 NM_001042480 NM_017856	-9655	-	TSC_hg19_v1_chrX_-_13956758 AB209525 U45955 NM_001001994	-100823	-	TSC_hg19_v1_chrX_-_13956533 AK294314	-101120	-	AK312591 NM_001118885 NM_001118886 NM_001171942 NM_002063 AK297304	489799	+	TSC_hg19_v1_chrX_-_14891182 BC136558 BC136560 BC043596 BC055411 NM_001018113 NM_152633 AK091383 AX746948	833524	-	NM_152581 TSC_hg19_v1_chrX_+_14891582 BC030641 AL832230 AK315781	833905	+	BC003607|GEMIN8|54960|gem (nuclear organelle) associated protein 8##AK000521|GEMIN8|54960|gem (nuclear organelle) associated protein 8##BC014324|GEMIN8|54960|gem (nuclear organelle) associated protein 8##BC020785|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_001042479|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_001042480|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_017856|GEMIN8|54960|gem (nuclear organelle) associated protein 8##AB209525|GPM6B|2824|glycoprotein M6B##U45955|GPM6B|2824|glycoprotein M6B##NM_001001994|GPM6B|2824|glycoprotein M6B##AK294314|GPM6B|2824|glycoprotein M6B##AK312591|GLRA2|2742|glycine receptor, alpha 2##NM_001118885|GLRA2|2742|glycine receptor, alpha 2##NM_001118886|GLRA2|2742|glycine receptor, alpha 2##NM_001171942|GLRA2|2742|glycine receptor, alpha 2##NM_002063|GLRA2|2742|glycine receptor, alpha 2##AK297304|GLRA2|2742|glycine receptor, alpha 2##BC136558|FANCB|2187|Fanconi anemia, complementation group B##BC136560|FANCB|2187|Fanconi anemia, complementation group B##BC043596|FANCB|2187|Fanconi anemia, complementation group B##BC055411|FANCB|2187|Fanconi anemia, complementation group B##NM_001018113|FANCB|2187|Fanconi anemia, complementation group B##NM_152633|FANCB|2187|Fanconi anemia, complementation group B##AK091383|FANCB|2187|Fanconi anemia, complementation group B##NM_152581|MOSPD2|158747|motile sperm domain containing 2##BC030641|MOSPD2|158747|motile sperm domain containing 2##AL832230|MOSPD2|158747|motile sperm domain containing 2##AK315781|MOSPD2|158747|motile sperm domain containing 2	0.965035	CTCF.p2:-16:0.965
chr14	97207864	97207972	reg1003999.p2	12.169	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-239134	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-239172	+	TSC_hg19_v1_chr14_+_96968718 NM_001252006 NM_001252007 NM_032632 AK302406 BC036014	-239209	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	55797	+	AK098639 NM_182560	1970031	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	2529699	-	BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##NM_001252006|PAPOLA|10914|poly(A) polymerase alpha##NM_001252007|PAPOLA|10914|poly(A) polymerase alpha##NM_032632|PAPOLA|10914|poly(A) polymerase alpha##AK302406|PAPOLA|10914|poly(A) polymerase alpha##BC036014|PAPOLA|10914|poly(A) polymerase alpha##NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.602416	CTCF.p2:24:0.517
chr9	107625639	107625767	reg1008160.p1	12.169	+	AK002137 BC017914 BX647652 NM_018376 AK310397 BC005202	-99251	+	TSC_hg19_v1_chr9_+_107509977 BC005935 NM_015469 AK301410 AF161417 AK024015 AL117557 BC045830 CU675195	-115693	+	BC140916 AB587601 NM_001004484	-169023	+	AB055982 AB445477 TSC_hg19_v1_chr9_-_107665989	40294	-	AB037924 TSC_hg19_v1_chr9_-_107666055	40348	-	BC146856 TSC_hg19_v1_chr9_-_107690419 AF285167 BC034824 BC141816 BC142693 AK022254	64681	-	AK002137|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC017914|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BX647652|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##NM_018376|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##AK310397|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC005202|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC005935|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##NM_015469|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AK301410|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AF161417|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AK024015|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AL117557|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##BC045830|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##BC140916|OR13D1|286365|olfactory receptor, family 13, subfamily D, member 1##NM_001004484|OR13D1|286365|olfactory receptor, family 13, subfamily D, member 1##AB055982|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AB445477|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AB037924|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	0.739381	CTCF.p2:-3:0.739
chr14	65630988	65631123	reg1006229.p1	12.167	+	TSC_hg19_v1_chr14_-_65569238 BC013669 NM_002382 NM_145112 NM_145113 NM_145114 NM_145116 NM_197957 AK290929 AL833643	-61817	-	AB463901 AY353088 CR542191 CU693010 X60287 M64240 AK292630 AK292189 BC003525 BC004516 AK290130 TSC_hg19_v1_chr14_-_65569205 BC036092 BC027924 BC025685	-61923	-	BC035148 BC052775 TSC_hg19_v1_chr14_+_65453967	-177089	+	AJ536056 NM_004480 NM_178155 NM_178156	246254	+	TSC_hg19_v1_chr14_+_65878582 BC142958 AK292413 AK294242 Y17976 Y17977	247565	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	248271	-	BC013669|MAX|4149|MYC associated factor X##NM_002382|MAX|4149|MYC associated factor X##NM_145112|MAX|4149|MYC associated factor X##NM_145113|MAX|4149|MYC associated factor X##NM_145114|MAX|4149|MYC associated factor X##NM_145116|MAX|4149|MYC associated factor X##NM_197957|MAX|4149|MYC associated factor X##AK290929|MAX|4149|MYC associated factor X##AL833643|MAX|4149|MYC associated factor X##AY353088|MAX|4149|MYC associated factor X##CR542191|MAX|4149|MYC associated factor X##X60287|MAX|4149|MYC associated factor X##M64240|MAX|4149|MYC associated factor X##AK292630|MAX|4149|MYC associated factor X##AK292189|MAX|4149|MYC associated factor X##BC003525|MAX|4149|MYC associated factor X##BC004516|MAX|4149|MYC associated factor X##AK290130|MAX|4149|MYC associated factor X##BC036092|MAX|4149|MYC associated factor X##BC027924|MAX|4149|MYC associated factor X##BC025685|MAX|4149|MYC associated factor X##AJ536056|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_004480|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178155|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178156|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431	0.981176	CTCF.p2:-34:0.981
chrX	47053027	47053153	reg1006129.p2	12.167	+	TSC_hg19_v1_chrX_+_47050243 BC013041	-2853	+	TSC_hg19_v1_chrX_+_47050192 NM_153280	-2943	+	TSC_hg19_v1_chrX_+_47004697 D50912 AM393073	-48321	+	TSC_hg19_v1_chrX_+_47053200 NM_003334	110	+	TSC_hg19_v1_chrX_+_47053224 AK296866	129	+	AK293161 TSC_hg19_v1_chrX_+_47053227	139	+	BC013041|UBA1|7317|ubiquitin-like modifier activating enzyme 1##NM_153280|UBA1|7317|ubiquitin-like modifier activating enzyme 1##D50912|RBM10|8241|RNA binding motif protein 10##AM393073|RBM10|8241|RNA binding motif protein 10##NM_003334|UBA1|7317|ubiquitin-like modifier activating enzyme 1##AK296866|UBA1|7317|ubiquitin-like modifier activating enzyme 1##AK293161|UBA1|7317|ubiquitin-like modifier activating enzyme 1	0.99674	CTCF.p2:-8:0.997
chr11	22355766	22355870	reg1004154.p1	12.166	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	-141171	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	-1664626	+	NM_004211 AF085412	-1734871	+	AB032435 NM_020346	3848	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	291543	-	TSC_hg19_v1_chr11_+_22688156 NM_001143830 AK313734	332340	+	AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F##NM_001143830|GAS2|2620|growth arrest-specific 2##AK313734|GAS2|2620|growth arrest-specific 2	0.997449	CTCF.p2:-25:0.997
chr12	102489593	102489718	reg1004370.p2	12.166	+	TSC_hg19_v1_chr12_-_102455912 AK314970 AK223339 AF151874 AF155655 NM_016053	-33794	-	TSC_hg19_v1_chr12_-_102455791 BC010889	-33878	-	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	-33905	-	AK026271 AF514994 BC000861 NM_024057	22663	-	TSC_hg19_v1_chr12_-_102513850 AK296733 AK310619	24223	-	NM_017915 AK302724 AK300041 BC070270 AF274940 BC030962 BC018903 AK303571 AK000648 BC014313	24403	+	AK314970|CCDC53|51019|coiled-coil domain containing 53##AK223339|CCDC53|51019|coiled-coil domain containing 53##AF151874|CCDC53|51019|coiled-coil domain containing 53##AF155655|CCDC53|51019|coiled-coil domain containing 53##NM_016053|CCDC53|51019|coiled-coil domain containing 53##BC010889|CCDC53|51019|coiled-coil domain containing 53##CR457171|CCDC53|51019|coiled-coil domain containing 53##AK026271|NUP37|79023|nucleoporin 37kDa##AF514994|NUP37|79023|nucleoporin 37kDa##BC000861|NUP37|79023|nucleoporin 37kDa##NM_024057|NUP37|79023|nucleoporin 37kDa##AK296733|NUP37|79023|nucleoporin 37kDa##AK310619|NUP37|79023|nucleoporin 37kDa##NM_017915|C12orf48|55010|chromosome 12 open reading frame 48##AK302724|C12orf48|55010|chromosome 12 open reading frame 48##AK300041|C12orf48|55010|chromosome 12 open reading frame 48##BC070270|C12orf48|55010|chromosome 12 open reading frame 48##AF274940|C12orf48|55010|chromosome 12 open reading frame 48##BC030962|C12orf48|55010|chromosome 12 open reading frame 48##BC018903|C12orf48|55010|chromosome 12 open reading frame 48##AK303571|C12orf48|55010|chromosome 12 open reading frame 48##AK000648|C12orf48|55010|chromosome 12 open reading frame 48##BC014313|C12orf48|55010|chromosome 12 open reading frame 48	0.934928	CTCF.p2:-5:0.935
chr19	17895289	17895429	reg1007941.p1	12.166	+	NM_001161359 NM_015122 TSC_hg19_v1_chr19_+_17862326 AK316458 BC041130	-33043	+	TSC_hg19_v1_chr19_+_17858564 NM_001161357 NM_001161358 AK291410 BC028021	-36808	+	DQ387861 NM_018174 AL834233 BC067115 TSC_hg19_v1_chr19_+_17830310 BC080547 AJ440784 AK027623 BC113952 AK308975	-65050	+	TSC_hg19_v1_chr19_+_17905918 NM_014256	10557	+	TSC_hg19_v1_chr19_+_17905971 AK075466 AK314323 AK075434 AB015630 AK225421 AB049585 AY358955 BC066876 BC067423 AK225478	10600	+	BC032810 BC040435 BC053345 BC061886 BC106721 BC071706 BC106722 NM_005543 S72482 AK302780 AY082014	36988	-	NM_001161359|FCHO1|23149|FCH domain only 1##NM_015122|FCHO1|23149|FCH domain only 1##AK316458|FCHO1|23149|FCH domain only 1##BC041130|FCHO1|23149|FCH domain only 1##NM_001161357|FCHO1|23149|FCH domain only 1##NM_001161358|FCHO1|23149|FCH domain only 1##AK291410|FCHO1|23149|FCH domain only 1##BC028021|FCHO1|23149|FCH domain only 1##DQ387861|MAP1S|55201|microtubule-associated protein 1S##NM_018174|MAP1S|55201|microtubule-associated protein 1S##AL834233|MAP1S|55201|microtubule-associated protein 1S##BC067115|MAP1S|55201|microtubule-associated protein 1S##BC080547|MAP1S|55201|microtubule-associated protein 1S##AJ440784|MAP1S|55201|microtubule-associated protein 1S##AK027623|MAP1S|55201|microtubule-associated protein 1S##BC113952|MAP1S|55201|microtubule-associated protein 1S##AK308975|MAP1S|55201|microtubule-associated protein 1S##NM_014256|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK075466|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK314323|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK075434|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AB015630|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK225421|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AB049585|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AY358955|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC066876|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC067423|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK225478|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC032810|INSL3|3640|insulin-like 3 (Leydig cell)##BC040435|INSL3|3640|insulin-like 3 (Leydig cell)##BC053345|INSL3|3640|insulin-like 3 (Leydig cell)##BC061886|INSL3|3640|insulin-like 3 (Leydig cell)##BC106721|INSL3|3640|insulin-like 3 (Leydig cell)##BC071706|INSL3|3640|insulin-like 3 (Leydig cell)##BC106722|INSL3|3640|insulin-like 3 (Leydig cell)##NM_005543|INSL3|3640|insulin-like 3 (Leydig cell)##S72482|INSL3|3640|insulin-like 3 (Leydig cell)##AK302780|INSL3|3640|insulin-like 3 (Leydig cell)##AY082014|INSL3|3640|insulin-like 3 (Leydig cell)	0.998491	CTCF.p2:7:0.998
chr14	106465709	106465866	reg1002200.p2	12.165	+	TSC_hg19_v1_chr14_-_106453169 X17117 AK129517 AK130825 BC065733 X59702	-12617	-	U32200 U32268 U32334 U32335 U32336 U32488 U32490 U32599 U32608 U32609 U32947 U32948 U32950 U32963 U33799 U33801 AF028098 AF028106 AF028107 AF028114 AF028118 AY155550 AY155551 DQ454559 AF460797 AF460726 AF460724 AF460827 DQ454629 DQ454614 DQ454962 GQ232822 DQ454705 DQ523871 DQ454580 DQ523917 DQ523919 AY003767 DQ454466 DQ454560 DQ454565 DQ454682 EU099268 GU552685 AY003808 AY003836 DQ454469 DQ454795 DQ454971 DQ454985 DQ454452 DQ454571 DQ454944 DQ454960 DQ523896 EF583670 DQ454558 DQ454677 DQ454859 DQ454868 DQ455000 DQ523852 DQ523901 DQ454442 DQ523848 HQ704012 DQ100720 DQ454840 DQ454949 FJ840328 FJ873931 HM116191 GQ232887 AJ487491 AJ487492 AJ487493 AJ487498 AJ487506 AY003837 JF810257 AF069907 EF091912 EF175411 EF175427 EF583661 EU350413 EU433868 EU433869 EU433881 EU667601 EU667602 FJ694875 GQ232782 GQ232813 GQ232814 GQ232841 GQ232875 GQ232936 GQ232966 GQ232996 JF810256 GQ232768 EF441747 EF583659 AF103205 AF103114 EF566909 U86787 AF484410 HQ392886 JF894284 AM279467 AM279468 AM279469 AM279470 AM279471 AM279552 AM279555 AM279588 AM279641 AF308558 EU099276 GQ232957 AF408722 HM774202 EU099163 HM774025 HM774888 HM775065 JN110525 JN110528 JN111117 L04330 L04332 L04340 FJ385388 FJ385429 GQ504861 HM774080 HM774150 HM774407 HM774529 HM774561 HM774885 HQ704005 HQ704037 S73138 AF103263 AF082193 AJ008249 AY099261 AY206987 AY998750 DQ097896 EU099144 EU099173 EU099285 AF402947 X94432 AM183993 AY393351 EU099152 EU099269 EU099281 AF306372 AJ236544 AJ271548 AY193806 AY376076 AY376077 AY376090 AY393002 AY393003 AY393011 AY393020 AY393107 AY393113 AY393114 AY393116 AY393122 AY393139 AY393140 AY393227 AY393228 AY393241 AY393250 AY393254 AY393257 AY393259 AY393354 AY393357 AY393363 AY393377 AY393497 AY393500 AY393506 AY393509 AY393511 AY393533 AY393613 AY393616 AY393617 AY393633 AY393637 AY393653 AY393671 AY393676 EU099082 EU099119 EU099146 JF894280 HM995126 JN159306 HM995172 HM995197 HM995672 AY941929 DQ100708 DQ100722 DQ523939 DQ523940 DQ524004 DQ524046 DQ524048 DQ524070 DQ524135 HM994894 HM995065 HM995066 HM995070 HM995071 HM995072 HM995073 HM995088 HM995175 HM995192 HM995193 HM995194 HM995195 HM995196 HM995198 HM995281 HM995297 HM995349 HM995351 HM995538 HM995541 HM995542 HM995586 HM995587 HM995589 HM995591 HM995593 HM995610 HM995612 HM995613 HM996403 HM996541 AY971055 DQ926099 AB063667 AB063719 AB063917 AB066970 AB066981 AB067004 AB067009 AB067029 AB067072 AB067119 AB067126 AB067131 AB067253 AB363079 AB363093 AB363142 AB363149 AB363155 AF035019 AF035020 AF209860 AJ239337 AJ308447 AY033279 AY033280 AY376105 AY866614 AY941843 AY941858 AY941885 AY941903 AY941937 AY944702 AY944720 DQ065631 DQ065643 DQ065667 DQ065682 DQ065683 DQ065690 DQ065691 DQ926090 DQ926220 DQ926223 DQ926495 DQ926527 EF178106 EU549725 EU549730 FJ385284 FJ385396 HQ378330 JF894278 JF894282 JF894286 U07988 AB063662 AB063801 AB063829 AB063919 AB066925 AB066926 AB066963 AB067152 AB067166 AB067301 AB067307 AB067308 AB067329 AB067390 AB067393 AB363083 AB363143 AB363151 AB363161 AF006523 AF021941 AF021969 AF022007 AF035786 AF062092 AF062194 AF062195 AF062197 AF115113 AF115129 AF174043 AF174084 AF174094 AF174099 AF174107 AF174114 AF174125 AF174127 AF302820 AF455545 AF455547 AJ239344 AJ239371 AJ308466 AJ389196 AJ414005 AJ414014 AJ617573 AY033238 AY055487 AY345921 AY553642 AY553645 AY577308 AY577310 AY640563 AY866611 AY941911 AY941936 AY941945 AY971057 AY971071 DQ100662 DQ100680 DQ100786 DQ100789 DQ100800 DQ100816 DQ100914 DQ100919 DQ225091 DQ926031 DQ926058 DQ926059 DQ926135 DQ926486 DQ926543 FJ385320 FJ385387 GU570212 GU570215 GU570217 GU570269 HQ689739 JF806453 JF806454 JN158766 JN158852 JN159083 JN159282 JN159291 JN159293 JN159302 JN159305 JN159446 L14456 L23558 S73506 U00499 U00505 U00539 U00554 U00562 U00568 U00586 U71104 U85231 U85241 U86522 Z18846 Z34893 Z92888 AF035803 AY686906 AY686915 AY944693 AY944713 AY944721 DQ535285 DQ535302 DQ535348 DQ535375 DQ535476 EF177970 EF178023 EF178112 EF178115 EF178119 EF178135 HM995869 HM995871 AY957509 AY957510 FJ039793 AF062143 AF062151 AF062178 AF062179 AF062226 AF062256 AF062257 AF062262 AF062267 AF062271 AF067121 AF174005 AF174006 AF174009 AF174016 AF174031 AJ009732 M29468 U43758 U43762 Z14213 Z36889 Z46348 Z47223 Z80852 L23559 M24668 AJ010445 TSC_hg19_v1_chr14_-_106453155 BC080557 M18512	-12862	-	AF064915 AF267793 DQ454464 FN563613 FN563615 FN563617 FN563618 FN563619 FN563620 FN563733 FN563734 AF460793 AY393595 DQ523938 FN563493 FN563497 FN563498 FN563499 FN563500 FN563501 FN563502 FN563503 FN563504 FN563505 FN563506 FN563508 FN563532 FN563533 FN563534 FN563535 FN563536 FN563537 FN563539 FN563541 FN563542 FN563543 FN563544 FN563545 FN563546 FN563547 FN563548 FN563549 FN563550 FN563551 FN563552 FN563553 FN563554 FN563555 FN563556 FN563557 FN563558 FN563559 FN563560 FN563561 FN563562 FN563563 FN563564 FN563565 FN563566 FN563568 FN563569 FN563570 FN563601 FN563604 FN563605 FN563606 FN563607 FN563608 FN563610 FN563638 FN563639 FN563640 FN563641 FN563642 FN563643 FN563644 FN563645 FN563646 FN563647 FN563648 FN563649 FN563650 FN563651 FN563652 FN563653 FN563654 FN563655 FN563656 FN563657 FN563658 FN563659 FN563660 FN563661 FN563674 FN563675 FN563676 FN563677 FN563678 FN563679 FN563680 FN563681 FN563682 FN563683 FN563684 FN563685 FN563686 FN563687 FN563688 FN563689 FN563690 FN563691 FN563692 FN563693 FN563694 FN563695 FN563696 FN563697 FN563698 FN563727 FN563728 FN563729 FN563730 FN563731 FN563732 FN563741 FN563742 FN563743 FN563744 FN563745 FN563746 FN563747 FN563748 FN563749 FN563750 FN563751 FN563752 DQ454919 DQ454917 DQ454897 M71234 DQ454581 DQ454690 DQ454896 DQ454978 DQ454888 DQ454959 DQ454895 AF017457 M71225 M71226 DQ523915 L04771 AJ008198 AJ008199 DQ454824 S75894 EU099248 EF407841 JF810281 L21746 AF459631 S76902 AF343422 AF343424 M99372 L21747 DQ454899 AY393584 AY393323 AY393326 AY393327 AY393332 AY393473 AY393474 AY393476 AY393477 AY393479 AY393484 AY393486 AY393487 AY393488 AY393489 AY393490 AY393492 AY393574 AY393575 AY393576 AY393577 AY393578 AY393579 AY393580 AY393581 AY393582 AY393583 AY393585 AY393586 AY393587 AY393588 AY393589 AY393590 AY393591 AY393592 AY393593 AY393594 EU099263 L21734 X65920 DQ524023 AF103096 AF035040 DQ523994 L21733 L21738 L21729 AF015136 AF015137 AF015139 AF015140 AF015141 AF015144 AF015145 AF015146 JN110879 JN110884 JN110895 JN110931 L04333 L04338 L04341 L04762 L04763 L04768 L04769 L04770 L04772 L21726 L21727 L21730 L21731 L21732 L21735 L21736 L21737 L21739 L21740 L21741 L21742 L21744 L21745 L21748 M71217 M71219 M71223 M71227 M71228 M71229 M71230 M71233 U13195 U13196 U13197 U13198 U13199 U13200 U13201 U13202 FJ385406 AF082200 AF103769 AF361061 AF361062 AF361063 AF361064 AF361065 AF361066 AF361067 AF361068 AF361069 AF361070 AF361071 AF361072 U21271 DQ524163 AF166264 L38894 U21250 U21251 U21263 U21264 U21265 AJ239381 AJ007440 DQ523936 DQ523948 DQ523949 DQ523956 DQ523961 DQ523963 DQ523978 DQ523981 DQ523982 DQ523983 DQ523996 DQ523998 DQ524010 DQ524016 DQ524025 DQ524056 DQ524063 DQ524064 DQ524066 DQ524067 DQ524069 DQ524071 DQ524073 DQ524075 DQ524076 DQ524078 DQ524081 DQ524082 DQ524083 DQ524084 DQ524085 DQ524086 DQ524091 DQ524093 DQ524094 DQ524095 DQ524097 DQ524098 DQ524101 DQ524103 DQ524105 DQ524106 DQ524107 DQ524109 DQ524112 DQ524113 DQ524116 DQ524119 DQ524121 DQ524122 DQ524123 DQ524128 DQ524129 DQ524139 DQ524145 DQ524156 DQ524157 DQ926041 HM996448 AF129749 U00535 AB063677 AB063678 AB063679 AB063680 AB063686 AB063687 AB063697 AB063724 AB063750 AB063809 AB063891 AB063907 AB063912 AB063922 AB066943 AB066951 AB066952 AB067336 AB067338 AB067339 AB067340 AB067341 AB067342 AB067343 AB067344 AB067347 AB067349 AB067351 AB067353 AB067355 AB067357 AB067358 AB067361 AB067363 AB067364 AB067365 AB067366 AB067368 AB067369 AB067370 AB067373 AB067374 AB067376 AF013615 AF021985 AF035039 AF062123 AF062213 AF062284 AF078942 AF110149 AF174044 AJ308465 AM279625 AM279626 AM279627 AY033244 AY033245 AY033248 AY033249 AY033259 AY033260 AY033261 AY033269 AY033277 AY033278 AY270187 AY270188 AY270189 AY685266 AY941880 AY941881 AY941882 AY941890 AY941918 AY941924 AY941925 AY971140 DQ005277 DQ005294 DQ100886 DQ100891 DQ100997 DQ205179 DQ212525 DQ212526 DQ535278 DQ535313 DQ535323 DQ926075 DQ926092 DQ926147 DQ926280 DQ926430 DQ926455 DQ926581 DQ926593 EF178076 FJ385286 FJ490201 HQ378327 S71250 U00548 U00558 X67879 X67880 X67881 X67882 X67883 X67884 X67885 X67886 X67887 X67888 X67889 X67890 X67891 X67892 X67893 X67894 X67895 X67896 X67897 X67898 X67900 Z15110 M18510 Z14210 Z14207 Z14209 AY392985 AY392987 AY392988 AY392989 AY392990 AY392991 AY392992 AY392993 AY392994 AY392995 AY392997 AY392998 AY393098 AY393099 AY393100 AY393101 AY393102 AY393103 AY393104 AY393205 AY393206 AY393207 AY393208 AF062114 AF062137 AF062165 AF062219 AF062254 AF062273 AY452136 AY452137 L21957 X65916 X65917 X65918 Z14158 Z14159 Z14160 Z14161 Z14162 Z14163 Z14164 Z14184 Z14185 Z14186 Z14187 Z14188 Z14208 Z14211 Z14223 Z47236 BC089412 AY510105 M34029 BX648616 TSC_hg19_v1_chr14_-_106406109	-59916	-	GQ232825 GU552779 GU552687 GU552689 AY003848 FJ873924 FJ873955 GQ232946 HM116167 EF407847 EU350414 GQ232973 HM774711 EF407839 EF441752 U86801 AF211930 AM279559 HM774196 EU099286 EU146322 L04328 L04336 L04337 L33037 AY062319 FJ385375 FJ385408 FJ385414 FJ385418 FJ385419 HM774332 HM774418 HM774599 HM774606 AF103282 EU099067 EU099203 EU099287 EU146373 EU146380 FJ385394 EU099221 EU099283 AF306375 AF306376 AM259139 AY062320 AY392849 AY393007 AY393013 AY393111 AY393223 AY393232 AY393255 AY393368 AY393531 AY393610 AY393666 DQ100814 EU099253 HM996275 AY033262 AY033283 EF177964 FJ385299 AB022655 AB067168 AB067394 AF022000 AJ239360 AJ414006 AY553644 AY553647 AY885171 DQ926345 FJ039788 HM152522 M17750 M17751 U00569 U00580 AY686877 AY944696 DQ535282 DQ535443 DQ535465 DQ535484 EF178053 EF178130 FJ195468 FJ195471 HM152519 AF062134 AF062139 AF062140 AF062142 AF062221 L01278 X65883 X65885 X65887 X65888 X65891 X65892 X65893 Z47274 Z47275 Z47276 Z47277 Z80847 BC075840 TSC_hg19_v1_chr14_-_106471733 BX640724 AK097348 AK126543 AK304469 BX640847 S42403	5870	-	U49664 U32269 U32952 AY312398 AY312399 DQ454445 DQ454564 DQ454725 DQ524089 DQ454727 DQ454701 AF460719 AF460723 AF460756 AF460759 AF460771 AF460834 AF460823 AF460829 AF069906 DQ454534 DQ454674 DQ454797 DQ454818 GQ232799 DQ454530 DQ454764 Z30560 DQ454570 DQ454557 DQ454637 GU552723 GQ232831 Z30574 DQ454608 DQ454707 DQ454862 DQ454866 DQ454867 DQ454932 DQ523879 GQ232818 Z30544 Z30556 Z30563 Z30597 Z30672 DQ454537 DQ454600 Z30594 DQ454991 Z30548 DQ454533 DQ454966 DQ523863 DQ454575 DQ454591 DQ454675 DQ454975 DQ454989 HM116173 AY003860 DQ454688 EF091927 JF810280 EU099245 AY393163 EU099075 EU099102 AY393165 EU099215 AM183979 AY393166 AY393171 AY393177 AY393179 AY393180 AY393181 AY393183 AY393184 S74500 EU620003 AF103363 AF400158 AJ240597 JN110684 S74642 Z46847 FJ385345 FJ385356 FJ385426 GQ504882 AY062307 AF103159 AB274406 AB274412 AY422526 HM995333 L38895 Z92893 AY671484 AY671502 HM996309 DQ524158 DQ524152 AF398957 DQ523937 DQ523942 DQ523974 DQ523976 DQ524014 DQ524020 DQ524029 DQ524039 DQ524045 DQ524146 HM996397 AM233760 AM233767 AM233773 DQ926107 AF453266 AY376082 EF177971 HM995388 HM995482 HM995628 HM995630 HM995662 HM995740 HM995924 HM996182 HM996322 HM996354 HM996496 HM996514 HM996515 AB066901 AB066907 AB067286 AB067291 AB084084 AB453233 AF174055 AF174064 AF174066 AF174090 AF174108 AF174113 AF262203 AF262207 AJ244952 AJ244989 AJ245004 AJ245022 AJ245025 AJ245048 AJ245053 AJ245233 AJ245239 AJ245242 AJ389195 AJ556756 AJ556762 AJ576037 AJ579119 AJ579123 AJ579127 AJ579128 AJ579137 AJ579254 AJ579295 AJ579298 AJ579299 AY640493 AY640507 AY640551 AY670735 AY670737 AY670748 AY670776 AY670778 AY670786 AY670793 AY670807 AY670829 AY670832 AY670848 AY670852 AY670854 AY670861 AY670868 AY670869 AY670876 AY670877 AY670880 AY670887 AY670888 AY670889 AY670891 AY670901 AY670906 AY670908 AY670909 AY670917 AY670922 AY670927 AY670934 AY670936 AY670937 AY670938 AY670939 AY670941 AY670945 AY670955 AY670956 AY670957 AY670964 AY670968 AY670971 AY670979 AY670996 AY671042 AY671084 AY671098 AY671112 AY671127 AY671131 AY671137 AY671138 AY671237 AY671320 AY671325 AY671331 AY671336 AY671344 AY671367 AY671381 AY671385 AY671396 AY671397 AY671404 AY671405 AY671407 AY671408 AY671417 AY671437 AY671440 AY671442 AY671448 AY671463 AY671465 AY671467 AY671469 AY671493 AY671501 AY671506 AY671509 AY671516 AY671522 AY671524 AY671526 AY671542 AY671546 AY671547 AY671550 AY671554 AY671558 AY671559 AY671569 AY671571 AY671584 AY671588 AY671590 AY671594 AY671604 AY671607 AY671608 AY671609 AY671610 AY671611 AY671613 AY671615 AY671616 AY671621 AY671622 AY671628 AY671633 AY671636 AY671643 AY671646 AY671647 AY671649 AY671655 AY671657 AY671662 AY671667 AY671669 AY671679 AY671680 AY671683 AY671687 AY671695 AY671747 AY671768 AY671777 AY671778 AY685295 AY685305 AY685312 AY781854 AY781863 AY971061 AY971111 AY971119 DQ005266 DQ005272 DQ005280 DQ100845 DQ100896 DQ205163 DQ926078 FJ039782 FJ385308 FJ385314 FJ385395 GU570393 GU570394 HM152486 L12191 L12196 L25294 S55101 S67077 U85239 Z18320 Z70635 Z70659 AY686879 DQ535276 DQ535307 DQ535328 EF177962 FJ195498 FJ195512 HM996178 X67910 AY392946 AY392947 AY392948 AY392956 AY671265 AY671019 AY671039 AY671041 AY671259 AY671249 AY671147 AY671154 AY671178 AY671210 AY671260 AY671261 AF013620 AF062200 AF062203 AF062207 AF062220 AF062245 AF062258 AF062264 AF062272 AF174013 AF174036 AF381602 AF381610 AM233776 AM233818 AY670746 AY671066 AY671181 AY671188 AY671211 AY671693 AY671738 M26997 M99609 X52110 Z11958 Z47221 Z75400 Z75402 BC073766 J00231 BC063384 BC011857 CU680082 CU687682 Z14196 Z14194 TSC_hg19_v1_chr14_-_106478575 Z14182	12566	-	AF267814 AF267818 AY393025 M34025 DQ454568 FJ874017 FJ840306 FJ840308 FJ840341 FJ840342 FJ840347 FJ840348 FJ840351 FJ840353 FJ840354 FJ840356 FJ840361 FJ840364 FJ840365 FJ840368 FJ840373 FJ840378 FJ840401 FJ840402 FJ840404 FJ873822 FJ873825 FJ873827 FJ873829 FJ873831 FJ873832 FJ873834 FJ873841 FJ873843 FJ873845 FJ873851 FJ873852 FJ873854 FJ873856 FJ873879 FJ873880 FJ873882 FJ873889 FJ873891 FJ873893 FJ873896 FJ873900 FJ873905 FJ873906 FJ873907 FJ873908 FJ873917 FJ873919 FJ873920 FJ873927 FJ873937 FJ873944 FJ873960 FJ873973 FJ873980 FJ873983 FJ874001 FJ874004 FJ874006 FJ874007 FJ874011 FJ874012 FJ874016 FJ874021 FJ874022 FJ874032 FJ874033 FJ874035 FJ874041 FJ874060 FJ874071 FJ874092 HM116099 HM116103 HM116104 HM116108 HM116110 HM116111 HM116112 HM116124 HM116125 HM116126 HM116127 HM116132 HM116134 HM116142 HM116150 HM116151 HM116156 HM116157 HM116164 HM116171 HM116176 HM116183 HM116185 HM116186 HM116188 HM116194 HM116200 HM116203 HM116204 HM116207 HM116210 HM116211 HM116212 HM116215 HM116218 HM116224 GU552693 GQ232960 GQ232962 GQ232978 AJ008188 S75886 AJ487496 AY003819 AY994082 EU090242 EU667603 JF810259 AY393312 AY392883 AY392887 AY392891 AY392897 AY392900 AY392903 AY393023 AY393026 AY393027 AY393028 AY393029 AY393030 AY393031 AY393032 AY393033 AY393034 AY393035 AY393036 AY393037 AY393038 AY393040 AY393041 AY393042 AY393043 AY393044 AY393045 AY393046 AY393048 AY393049 AY393050 AY393051 AY393276 AY393277 AY393278 AY393283 AY393285 AY393288 AY393289 AY393290 AY393292 AY393294 AY393298 AY393299 AY393303 AY393304 AY393307 AY393310 AY393311 AY393382 AY393386 AY393390 AY393391 AY393392 AY393393 AY393406 AY393413 AY393416 AY393417 AY393418 AY393419 AY393421 AY393423 AY393435 AY393440 AY393452 AY393554 AY393555 AY393557 AY393558 AY393559 AY393564 AY393565 EU099064 EU099181 EU099246 DQ100785 JN110964 AY955064 JN110468 JN110515 JN110517 JN110539 JN110572 JN110594 JN110907 JN110984 JN110994 JN111158 JN111166 JN111205 AY062324 AM279571 AY866601 AY866658 AM279525 AM279573 AY866680 DQ100676 DQ100927 DQ100946 AM279595 AM279596 AM279599 AM279600 DQ100868 DQ926119 DQ926440 DQ926554 DQ926566 HM995527 HM995209 HM995210 HM995212 HM995214 HM995215 HM995376 HM995377 HM995380 HM995398 HM995401 HM995473 HM995528 HM995531 HM995597 HM995599 HM995814 HM995819 AB063834 AB066852 AB066861 AB066862 AB066864 AB066865 AB066866 AB066868 AB066869 AB066870 AB066871 AB066873 AB066874 AB066878 AB067185 AB067189 AB067221 AB067222 AB067223 AB067226 AB067228 AB067229 AB067231 AB067232 AB363096 AB363107 AB374193 AB374196 AB374197 AB374204 AF035018 AF062155 AF062255 AF129754 AF174046 AF174061 AF174070 AF174071 AF455551 AF460966 AY055482 AY345923 AY866550 AY866584 AY866603 AY866625 AY866961 AY941941 DQ205143 DQ490734 DQ490735 DQ490736 DQ923046 DQ926138 DQ926180 DQ926226 DQ926362 DQ926376 DQ926412 DQ926456 DQ926482 DQ926490 DQ926499 DQ926558 DQ926576 DQ926582 DQ926586 DQ926588 DQ926592 DQ926605 DQ926606 DQ926610 DQ926650 FR820874 GU570276 GU570278 GU570279 GU570280 HM152514 HQ378331 HQ378364 HQ378373 S73953 U00545 U00552 U00555 X64147 M90808 AY393141 AY393143 AY393144 AY393146 AY393147 AY393149 AY393150 X69861 AF062130 AF062268 AF062282 AY172958 S67984 X81695 Z47235 Z47237 Z47243 AK301335 TSC_hg19_v1_chr14_-_106494595 AK057617 BC092449	28595	-	AK129517|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC080557|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089412|IGHM|3507|immunoglobulin heavy constant mu##BC075840|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640724|IGHM|3507|immunoglobulin heavy constant mu##AK097348|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK126543|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640847|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073766|IGHV4-31|28396|immunoglobulin heavy variable 4-31##J00231|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC063384|IGHD|3495|immunoglobulin heavy constant delta##BC011857|IGHM|3507|immunoglobulin heavy constant mu##AK301335|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC092449|IGHA1|3493|immunoglobulin heavy constant alpha 1	4.934314	CTCF.p2:18:0.999	CTCF.p2:-20:0.998	CTCF.p2:-41:0.998	CTCF.p2:-81:0.998	CTCF.p2:96:0.832
chr2	128349174	128349299	reg1007654.p1	12.165	+	TSC_hg19_v1_chr2_+_128293312 NM_001080527	-55892	+	BC065279 BC110536 BC110537 TSC_hg19_v1_chr2_-_128284054 AK000868 AL834178 AK296848 AK027561 AK295970 AK309006 AK056881 AK294669 NM_017969	-65271	-	TSC_hg19_v1_chr2_+_128176019 BC034377	-173210	+	NM_001161415 NM_001161416 NM_001161417 NM_005291 AK292725 BX538082 BC013202 Z94154 Y12546 BC031653	54362	+	AB463832 AF527767 AK094954 AF527764 NM_017980	72829	-	AK022470 AK000906 TSC_hg19_v1_chr2_-_128432682 BC065816 AF527765 NM_001136037 NM_001161403	83466	-	NM_001080527|MYO7B|4648|myosin VIIB##BC065279|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110536|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110537|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK000868|IWS1|55677|IWS1 homolog (S. cerevisiae)##AL834178|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK296848|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK027561|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK295970|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK309006|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK056881|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK294669|IWS1|55677|IWS1 homolog (S. cerevisiae)##NM_017969|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC034377|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##NM_001161415|GPR17|2840|G protein-coupled receptor 17##NM_001161416|GPR17|2840|G protein-coupled receptor 17##NM_001161417|GPR17|2840|G protein-coupled receptor 17##NM_005291|GPR17|2840|G protein-coupled receptor 17##AK292725|GPR17|2840|G protein-coupled receptor 17##BX538082|GPR17|2840|G protein-coupled receptor 17##BC013202|GPR17|2840|G protein-coupled receptor 17##Z94154|GPR17|2840|G protein-coupled receptor 17##Y12546|GPR17|2840|G protein-coupled receptor 17##BC031653|GPR17|2840|G protein-coupled receptor 17##AF527767|LIMS2|55679|LIM and senescent cell antigen-like domains 2##AK094954|LIMS2|55679|LIM and senescent cell antigen-like domains 2##AF527764|LIMS2|55679|LIM and senescent cell antigen-like domains 2##NM_017980|LIMS2|55679|LIM and senescent cell antigen-like domains 2##AK022470|LIMS2|55679|LIM and senescent cell antigen-like domains 2##AK000906|LIMS2|55679|LIM and senescent cell antigen-like domains 2##BC065816|LIMS2|55679|LIM and senescent cell antigen-like domains 2##AF527765|LIMS2|55679|LIM and senescent cell antigen-like domains 2##NM_001136037|LIMS2|55679|LIM and senescent cell antigen-like domains 2##NM_001161403|LIMS2|55679|LIM and senescent cell antigen-like domains 2	0.602524	CTCF.p2:-16:0.603
chr3	52885529	52885662	reg1008513.p1	12.164	+	NM_205853	-16361	-	AK298407 AK298412 AK298429 D38595 BC136392 BC136393 TSC_hg19_v1_chr3_-_52864689 AK303769 NM_001166449 NM_002218	-20894	-	NM_002217 TSC_hg19_v1_chr3_+_52828811 X67055 AK222757 AK298450 BC107604 BC107605 BC107814	-56796	+	TSC_hg19_v1_chr3_-_52931547 AY726591 BC047015	45854	-	TSC_hg19_v1_chr3_-_52931595 NM_001198974 NM_198563	46062	-	TSC_hg19_v1_chr3_-_53079286 NM_001005159	193714	-	NM_205853|MUSTN1|389125|musculoskeletal, embryonic nuclear protein 1##AK298407|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##AK298412|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##AK298429|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##D38595|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##BC136392|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##BC136393|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##AK303769|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##NM_001166449|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##NM_002218|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##NM_002217|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##X67055|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##AK222757|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##AK298450|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##BC107604|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##BC107605|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##BC107814|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##AY726591|TMEM110|375346|transmembrane protein 110##BC047015|TMEM110|375346|transmembrane protein 110##NM_001198974|TMEM110-MUSTN1|100526772|TMEM110-MUSTN1 readthrough##NM_198563|TMEM110|375346|transmembrane protein 110##NM_001005159|SFMBT1|51460|Scm-like with four mbt domains 1	0.098984	
chr6	121376854	121376997	reg1008224.p1	12.164	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-1706004	-	BX538186 AK091682 AX747126 NM_001100411	-1906579	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-1977017	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	278718	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	379900	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	1343770	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.321925	CTCF.p2:-15:0.322
chr15	99394265	99394379	reg1006078.p2	12.163	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-201566	+	TSC_hg19_v1_chr15_+_99191767 AB425196	-202351	+	AK097062 AK097062 NM_182562	-336712	-	BC104743 BC104744 BC105686 NM_001102612	154515	-	AK058162 NM_001167902	156701	-	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	250918	+	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein	0.022172	
chr17	38324755	38324864	reg1006073.p2	12.163	+	TSC_hg19_v1_chr17_+_38296796 CU690706	-28013	+	TSC_hg19_v1_chr17_+_38296779 BC030008	-28032	+	NM_007359 TSC_hg19_v1_chr17_+_38296550 AK292425 AK310635 X80199 BC050526 BC044656	-28243	+	NM_016339	9432	+	TSC_hg19_v1_chr17_+_38375614 AK289779 AK311544 AL834239 NM_133264 BC025965 AK315836 AK055057 AK290301 BC065551 AF370396	50805	+	AK313620 TSC_hg19_v1_chr17_+_38444130	119321	+	BC030008|CASC3|22794|cancer susceptibility candidate 3##NM_007359|CASC3|22794|cancer susceptibility candidate 3##AK292425|CASC3|22794|cancer susceptibility candidate 3##AK310635|CASC3|22794|cancer susceptibility candidate 3##X80199|CASC3|22794|cancer susceptibility candidate 3##BC050526|CASC3|22794|cancer susceptibility candidate 3##BC044656|CASC3|22794|cancer susceptibility candidate 3##NM_016339|RAPGEFL1|51195|Rap guanine nucleotide exchange factor (GEF)-like 1##AK289779|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK311544|WIPF2|147179|WAS/WASL interacting protein family, member 2##AL834239|WIPF2|147179|WAS/WASL interacting protein family, member 2##NM_133264|WIPF2|147179|WAS/WASL interacting protein family, member 2##BC025965|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK315836|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK055057|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK290301|WIPF2|147179|WAS/WASL interacting protein family, member 2##BC065551|WIPF2|147179|WAS/WASL interacting protein family, member 2##AF370396|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK313620|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)	0.0	
chr2	3698686	3698802	reg1006041.p1	12.163	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-56175	+	X74803 TSC_hg19_v1_chr2_+_3627765	-70999	+	TSC_hg19_v1_chr2_+_3623128 BC071919 AB464168 DQ892985 DQ896234 M77233 AF085824	-75579	+	AK302299 NM_018436 BC029652	7053	+	U23752 AB028641 NM_003108 BC025789 AB464713	2134071	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	3307156	-	AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##X74803|RPS7|6201|ribosomal protein S7##BC071919|RPS7|6201|ribosomal protein S7##DQ892985|RPS7|6201|ribosomal protein S7##DQ896234|RPS7|6201|ribosomal protein S7##M77233|RPS7|6201|ribosomal protein S7##AF085824|RPS7|6201|ribosomal protein S7##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	0.999143	CTCF.p2:39:0.999
chr8	22287925	22288036	reg1006794.p1	12.163	+	TSC_hg19_v1_chr8_+_22225175 AK295807	-62805	+	TSC_hg19_v1_chr8_+_22225050 NM_001135153	-62948	+	TSC_hg19_v1_chr8_+_22224790 AK172810 BC015770 D31887	-63135	+	AK055013 TSC_hg19_v1_chr8_+_22298511 NM_001243974 NM_001243975 NM_005605	10466	+	TSC_hg19_v1_chr8_+_22298590 BC004864 S46622 AK299415	10657	+	TSC_hg19_v1_chr8_+_22298813 AY007249 AB385002 CU678778	10864	+	AK295807|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##NM_001135153|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##AK172810|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##BC015770|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##D31887|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##AK055013|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##NM_001243974|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##NM_001243975|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##NM_005605|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##BC004864|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##S46622|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##AK299415|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##AY007249|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme	0.142613	
chr4	32464720	32464849	reg1009060.p1	12.161	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-1742325	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-1742590	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-1742785	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	3781253	-	AK131492 NM_001136536 AK304357 AK316523	3818462	+	BC157885 NM_001170700	3820859	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.596897	CTCF.p2:-3:0.584
chr11	121192463	121192585	reg1005705.p1	12.158	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	-28970	+	TSC_hg19_v1_chr11_+_121163484 AK096847 AK223141 AK222686	-29042	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	-29119	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	130425	+	TSC_hg19_v1_chr11_+_121323112 AK309523	130651	+	TSC_hg19_v1_chr11_+_121461071 AK294404	268574	+	BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK096847|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK223141|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK222686|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing	0.0	
chr11	3509337	3509461	reg1007955.p1	12.156	+	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	-109020	-	AK293940 NM_001039165	-255784	-	AB529240 AY255583 NM_001164377	-269357	-	NM_053017 NM_001079536 Y16835	154115	-	BC017828 BC069102 NM_004314 S74683 BC111729	156971	+	AB528800 AJ278118 AJ295237 BC136250 BC143303 AF199235 NM_020402	183179	-	BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195##AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##NM_053017|ART5|116969|ADP-ribosyltransferase 5##NM_001079536|ART5|116969|ADP-ribosyltransferase 5##Y16835|ART5|116969|ADP-ribosyltransferase 5##BC017828|ART1|417|ADP-ribosyltransferase 1##BC069102|ART1|417|ADP-ribosyltransferase 1##NM_004314|ART1|417|ADP-ribosyltransferase 1##S74683|ART1|417|ADP-ribosyltransferase 1##BC111729|ART1|417|ADP-ribosyltransferase 1##AJ278118|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AJ295237|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC136250|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC143303|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AF199235|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##NM_020402|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10	0.991264	CTCF.p2:-13:0.991
chr11	57335748	57335886	reg1007919.p1	12.156	+	AK093462 TSC_hg19_v1_chr11_-_57335794 NM_198183	-38	-	AF031141 CR457126 CU689396 DQ891291 DQ894475 TSC_hg19_v1_chr11_-_57335144 AK315755 AK129621 AF061736 BC032491 NM_004223	-687	-	NM_001105565	-25704	+	NM_000062 TSC_hg19_v1_chr11_+_57365157 AK303809 AK312626 AK293054 AK303840 AB209826 M13656 M13690	29300	+	TSC_hg19_v1_chr11_+_57365695 GU727623 NM_001032295 BC011171 AB590526 AY732485 AY732486 BT006966 DQ891799 DQ894982	29855	+	TSC_hg19_v1_chr11_-_57414981 BC111012	79196	-	AK093462|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##NM_198183|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##AF031141|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##CR457126|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##DQ891291|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##DQ894475|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##AK315755|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##AK129621|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##AF061736|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##BC032491|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##NM_004223|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##NM_001105565|SMTNL1|219537|smoothelin-like 1##NM_000062|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK303809|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK312626|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK293054|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK303840|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AB209826|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##M13656|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##M13690|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##GU727623|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##NM_001032295|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##BC011171|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AY732485|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AY732486|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##BT006966|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##DQ891799|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##DQ894982|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##BC111012|YPEL4|219539|yippee-like 4 (Drosophila)	0.120171	
chr2	28789744	28789853	reg1004128.p1	12.156	+	BC150633 NM_001170585 NM_153021 BC153864	-70837	+	TSC_hg19_v1_chr2_+_28616369 AK315415 X16706 AB528427 CU692714 DQ893428 DQ896743 CR542262	-173325	+	TSC_hg19_v1_chr2_+_28616346 BC022791	-173448	+	TSC_hg19_v1_chr2_+_28824770 BC042674	34985	+	TSC_hg19_v1_chr2_+_28974719 AK303682 AK295957 AK316532 NM_206876 NM_002709 BX647970 AK312329 BX647295 X80910	184876	+	TSC_hg19_v1_chr2_+_28974924 BC002697 BC012045 AB464241 AM392772 BT019744 CR542263 CR542285	185111	+	BC150633|PLB1|151056|phospholipase B1##NM_001170585|PLB1|151056|phospholipase B1##NM_153021|PLB1|151056|phospholipase B1##BC153864|PLB1|151056|phospholipase B1##AK315415|FOSL2|2355|FOS-like antigen 2##X16706|FOSL2|2355|FOS-like antigen 2##DQ893428|FOSL2|2355|FOS-like antigen 2##DQ896743|FOSL2|2355|FOS-like antigen 2##CR542262|FOSL2|2355|FOS-like antigen 2##BC022791|FOSL2|2355|FOS-like antigen 2##BC042674|PLB1|151056|phospholipase B1##AK303682|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK295957|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK316532|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_206876|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_002709|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647970|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK312329|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647295|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##X80910|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BC002697|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BC012045|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AM392772|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BT019744|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##CR542263|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##CR542285|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	1.761784	CTCF.p2:-22:0.663	CTCF.p2:31:0.922
chr4	22390995	22391125	reg1007849.p1	12.156	+	NM_147182 TSC_hg19_v1_chr4_-_21950396	-440676	-	BX648990 DQ148490 NM_001035003	-691743	-	DQ148491 NM_001035004	-844782	-	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	126494	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	303532	+	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	1500593	-	NM_147182|KCNIP4|80333|Kv channel interacting protein 4##BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##DQ148491|KCNIP4|80333|Kv channel interacting protein 4##NM_001035004|KCNIP4|80333|Kv channel interacting protein 4##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	0.997242	CTCF.p2:3:0.997
chr5	41843736	41843856	reg1007490.p1	12.156	+	AB464014 TSC_hg19_v1_chr5_-_41510701 AK127142 BX648329 NM_001005473	-333118	-	BC035723 NM_001115131	-582257	-	J05024 J04506 AK292509 TSC_hg19_v1_chr5_-_41213635 J05064 AK313673 NM_000065	-630207	-	AB528366 CR457049 CU679223 DQ891805 DQ894989 TSC_hg19_v1_chr5_-_41870488 AK312327	26678	-	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	26787	-	TSC_hg19_v1_chr5_-_41870706 NM_000436	26950	-	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BC035723|C6|729|complement component 6##NM_001115131|C6|729|complement component 6##J05024|C6|729|complement component 6##J04506|C6|729|complement component 6##AK292509|C6|729|complement component 6##J05064|C6|729|complement component 6##AK313673|C6|729|complement component 6##NM_000065|C6|729|complement component 6##CR457049|OXCT1|5019|3-oxoacid CoA transferase 1##DQ891805|OXCT1|5019|3-oxoacid CoA transferase 1##DQ894989|OXCT1|5019|3-oxoacid CoA transferase 1##AK312327|OXCT1|5019|3-oxoacid CoA transferase 1##BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1	0.946799	CTCF.p2:9:0.947
chr12	39300511	39300656	reg1007143.p4	12.155	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	-1200	-	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-589958	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-5125110	+	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	536416	-	AK314254 NM_005164	713259	-	BC038754 NM_001031748 BC048120 AK097445	719412	+	AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40	0.737131	CTCF.p2:8:0.706
chr11	119067723	119067849	reg1007800.p1	12.154	+	NM_001145018	-1203	-	NM_001168468 NM_024791 AK026409 AK091966 AK298333 AX747282 BX648391 TSC_hg19_v1_chr11_+_119056183 AK315403 BC029042 AY047359 CU688588 AB094096	-11600	+	TSC_hg19_v1_chr11_+_119039454 BX647705 AB094095 BC023974 NM_024618 NM_170722 AK303002 AK291716 BC110890	-28339	+	TSC_hg19_v1_chr11_-_119076895 BC043548	9112	-	TSC_hg19_v1_chr11_+_119076992 X57110 NM_005188	9197	+	TSC_hg19_v1_chr11_+_119077024 BC132733 BC136463	9254	+	NM_001145018|CCDC153|283152|coiled-coil domain containing 153##NM_001168468|PDZD3|79849|PDZ domain containing 3##NM_024791|PDZD3|79849|PDZ domain containing 3##AK026409|PDZD3|79849|PDZ domain containing 3##AK091966|PDZD3|79849|PDZ domain containing 3##AK298333|PDZD3|79849|PDZ domain containing 3##BX648391|PDZD3|79849|PDZ domain containing 3##AK315403|PDZD3|79849|PDZ domain containing 3##BC029042|PDZD3|79849|PDZ domain containing 3##AY047359|PDZD3|79849|PDZ domain containing 3##AB094096|PDZD3|79849|PDZ domain containing 3##BX647705|NLRX1|79671|NLR family member X1##AB094095|NLRX1|79671|NLR family member X1##BC023974|NLRX1|79671|NLR family member X1##NM_024618|NLRX1|79671|NLR family member X1##NM_170722|NLRX1|79671|NLR family member X1##AK303002|NLRX1|79671|NLR family member X1##AK291716|NLRX1|79671|NLR family member X1##BC110890|NLRX1|79671|NLR family member X1##BC043548|CCDC153|283152|coiled-coil domain containing 153##X57110|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##NM_005188|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##BC132733|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##BC136463|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence	0.94577	CTCF.p2:4:0.946
chr16	28699764	28699902	reg1007571.p1	12.154	+	BC048316 TSC_hg19_v1_chr16_-_28634894 NM_177536	-64944	-	L10819 TSC_hg19_v1_chr16_-_28621339 BC000923 L19999 NM_001055 NM_177529	-78511	-	NM_177530 NM_177534	-79185	-	AK292155 NM_001199142 BC157842	100	+	BC107692 NM_001037808 NM_003752 TSC_hg19_v1_chr16_+_28722786 AK301183 NM_001099661 AK301233 AK304500 AK055366 AK299421 AK303790 BC001571 BC000533 AY762099 AK293264 AK000739 BC071705	22986	+	BC157849 AB527254 DQ891632 DQ894822 TSC_hg19_v1_chr16_+_28723065	23189	+	NM_177536|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##L10819|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##BC000923|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##L19999|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##NM_001055|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##NM_177529|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##NM_177530|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##NM_177534|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C	0.999612	CTCF.p2:-19:1.000
chr4	38321570	38321693	reg1006854.p3	12.154	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-342614	+	AF095288 BC069114 BC069400 NM_006607	-359576	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-428842	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	344195	+	AF289565 TSC_hg19_v1_chr4_-_38666549	344858	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	462968	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.105842	
chr14	25204244	25204388	reg1008644.p1	12.153	+	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-100898	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-125455	-	AB590242 CR456807 CR541704 DQ893067 DQ896320 M16117 TSC_hg19_v1_chr14_-_25045457 AK225914 BC014460 NM_001911	-158870	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	314922	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1862672	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	4031912	+	AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##CR456807|CTSG|1511|cathepsin G##CR541704|CTSG|1511|cathepsin G##DQ893067|CTSG|1511|cathepsin G##DQ896320|CTSG|1511|cathepsin G##M16117|CTSG|1511|cathepsin G##AK225914|CTSG|1511|cathepsin G##BC014460|CTSG|1511|cathepsin G##NM_001911|CTSG|1511|cathepsin G##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1	0.999508	CTCF.p2:-12:1.000
chr16	57079816	57079938	reg1004399.p2	12.153	+	AF389420 EF452236 TSC_hg19_v1_chr16_+_57054697	-25217	+	AK074182 NM_032206	-28892	+	TSC_hg19_v1_chr16_+_57023474 AK097030	-56417	+	TSC_hg19_v1_chr16_+_57126462 NM_152727	46588	+	TSC_hg19_v1_chr16_+_57126513 AF492484 BC053658	46631	+	TSC_hg19_v1_chr16_+_57126530 AK315394	46696	+	AF389420|NLRC5|84166|NLR family, CARD domain containing 5##EF452236|NLRC5|84166|NLR family, CARD domain containing 5##AK074182|NLRC5|84166|NLR family, CARD domain containing 5##NM_032206|NLRC5|84166|NLR family, CARD domain containing 5##AK097030|NLRC5|84166|NLR family, CARD domain containing 5##NM_152727|CPNE2|221184|copine II##AF492484|CPNE2|221184|copine II##BC053658|CPNE2|221184|copine II##AK315394|CPNE2|221184|copine II	0.99146	CTCF.p2:8:0.991
chr17	42600641	42600782	reg1008437.p1	12.153	+	TSC_hg19_v1_chr17_-_42580958 NM_001002909	-19739	-	TSC_hg19_v1_chr17_-_42580760 BC136629 BC144323 AK025600 BC140010	-19947	-	AB528003 J02764 BC117443 BC126442 AK297155 AK315335 M34480 NM_000419	-133855	-	TSC_hg19_v1_chr17_+_42634696 NM_001466 BC052266 L37882 BC113402 BC113404 AB017364 AB590852	34115	+	TSC_hg19_v1_chr17_+_42733745 NM_001145080	133041	+	TSC_hg19_v1_chr17_-_42767190 CU690504 BC023298 AL833590 AK056357 BC047776 BX648868 NM_001099225 NM_144609	166417	-	NM_001002909|GPATCH8|23131|G patch domain containing 8##BC136629|GPATCH8|23131|G patch domain containing 8##BC144323|GPATCH8|23131|G patch domain containing 8##AK025600|GPATCH8|23131|G patch domain containing 8##BC140010|GPATCH8|23131|G patch domain containing 8##J02764|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC117443|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC126442|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK297155|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK315335|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##M34480|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##NM_000419|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##NM_001466|FZD2|2535|frizzled family receptor 2##BC052266|FZD2|2535|frizzled family receptor 2##L37882|FZD2|2535|frizzled family receptor 2##BC113402|FZD2|2535|frizzled family receptor 2##BC113404|FZD2|2535|frizzled family receptor 2##AB017364|FZD2|2535|frizzled family receptor 2##NM_001145080|C17orf104|284071|chromosome 17 open reading frame 104##BC023298|CCDC43|124808|coiled-coil domain containing 43##AL833590|CCDC43|124808|coiled-coil domain containing 43##AK056357|CCDC43|124808|coiled-coil domain containing 43##BC047776|CCDC43|124808|coiled-coil domain containing 43##BX648868|CCDC43|124808|coiled-coil domain containing 43##NM_001099225|CCDC43|124808|coiled-coil domain containing 43##NM_144609|CCDC43|124808|coiled-coil domain containing 43	0.806668	CTCF.p2:-1:0.807
chr3	180312857	180312988	reg1006778.p2	12.153	+	AB032593 NM_016559 AB032592 TSC_hg19_v1_chr3_-_179754937 AK299633 AK294501 AK314283 BC036183	-558196	-	TSC_hg19_v1_chr3_+_179370901 NM_003940 U75362 BC016146 AK290338 AM393315 AM393392 AM393610 AM393780 DQ892472 DQ895684	-942027	+	TSC_hg19_v1_chr3_+_179322594 NM_001199957 NM_001199958 NM_002492 BX648034 BC005271 BC009796 AK313822 AF047181 BC093071 BC017909 CU679497	-990329	+	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	7081	+	AB075860 TSC_hg19_v1_chr3_+_180320970	8041	+	AK304270 NM_181426	84349	-	AB032593|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_016559|PEX5L|51555|peroxisomal biogenesis factor 5-like##AB032592|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK299633|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK294501|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK314283|PEX5L|51555|peroxisomal biogenesis factor 5-like##BC036183|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_003940|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##U75362|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##BC016146|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AK290338|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393315|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393392|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393610|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393780|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ892472|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ895684|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##NM_001199957|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_001199958|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##AB075860|TTC14|151613|tetratricopeptide repeat domain 14##AK304270|CCDC39|339829|coiled-coil domain containing 39##NM_181426|CCDC39|339829|coiled-coil domain containing 39	0.168227	
chr5	125835772	125835922	reg1008432.p1	12.151	+	NM_001146322 AK303857	-35031	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	-76660	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	-77004	+	TSC_hg19_v1_chr5_-_125930891 AB489160 EU831757 EU831835 S74728 BC073174 BC071712 AK295526 BC002515 AK312459 AK297365 NM_001182 NM_001201377 NM_001202404	95009	-	AK023255 NM_032177 TSC_hg19_v1_chr5_+_125936641 BC021161 AK024065 AK298497 AK225464 CR457305 DQ893213 DQ896542	100785	+	BC130495 BC130497 AK131015 NM_207408 HQ258080	131568	+	NM_001146322|GRAMD3|65983|GRAM domain containing 3##AK303857|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##EU831757|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##EU831835|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##S74728|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC073174|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC071712|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK295526|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC002515|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK312459|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK297365|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001182|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001201377|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001202404|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK023255|PHAX|51808|phosphorylated adaptor for RNA export##NM_032177|PHAX|51808|phosphorylated adaptor for RNA export##BC021161|PHAX|51808|phosphorylated adaptor for RNA export##AK024065|PHAX|51808|phosphorylated adaptor for RNA export##AK298497|PHAX|51808|phosphorylated adaptor for RNA export##AK225464|PHAX|51808|phosphorylated adaptor for RNA export##CR457305|PHAX|51808|phosphorylated adaptor for RNA export##DQ893213|PHAX|51808|phosphorylated adaptor for RNA export##DQ896542|PHAX|51808|phosphorylated adaptor for RNA export##BC130495|C5orf48|389320|chromosome 5 open reading frame 48##BC130497|C5orf48|389320|chromosome 5 open reading frame 48##AK131015|C5orf48|389320|chromosome 5 open reading frame 48##NM_207408|C5orf48|389320|chromosome 5 open reading frame 48##HQ258080|C5orf48|389320|chromosome 5 open reading frame 48	0.989474	CTCF.p2:15:0.989
chr8	95917594	95917736	reg1006192.p1	12.151	+	TSC_hg19_v1_chr8_-_95907430 BC007015 BC020729 NM_057749	-10213	-	TSC_hg19_v1_chr8_+_95835588 BC136754 BC144396 BC144397	-81965	+	TSC_hg19_v1_chr8_+_95835522 BC099915 AB161944 NM_017864	-82117	+	TSC_hg19_v1_chr8_-_95961604 AK315071 AF409114 AF409115 AK125880 NM_001135733 NM_033285	43992	-	TSC_hg19_v1_chr8_+_96037224 NM_152416 BC028166 DQ891641 DQ894830 AK298631 AK301414	119639	+	TSC_hg19_v1_chr8_+_96145948 NM_024613	228280	+	BC007015|CCNE2|9134|cyclin E2##BC020729|CCNE2|9134|cyclin E2##NM_057749|CCNE2|9134|cyclin E2##BC136754|INTS8|55656|integrator complex subunit 8##BC144396|INTS8|55656|integrator complex subunit 8##BC144397|INTS8|55656|integrator complex subunit 8##BC099915|INTS8|55656|integrator complex subunit 8##AB161944|INTS8|55656|integrator complex subunit 8##NM_017864|INTS8|55656|integrator complex subunit 8##AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_152416|C8orf38|137682|chromosome 8 open reading frame 38##BC028166|C8orf38|137682|chromosome 8 open reading frame 38##DQ891641|C8orf38|137682|chromosome 8 open reading frame 38##DQ894830|C8orf38|137682|chromosome 8 open reading frame 38##AK298631|C8orf38|137682|chromosome 8 open reading frame 38##AK301414|C8orf38|137682|chromosome 8 open reading frame 38##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2	0.0	
chr11	19281437	19281552	reg1005859.p1	12.150	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-18293	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-19019	-	U20324 U72899 U49837 BC057221 NM_001127656 TSC_hg19_v1_chr11_-_19223531 AK313289 NM_003476 AF121260	-57936	-	AB063115 NM_001111018 AJ488205	90821	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	453372	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	762894	+	AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##U20324|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U72899|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U49837|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##BC057221|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_001127656|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AK313289|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_003476|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AF121260|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2	0.999567	CTCF.p2:-19:1.000
chr17	62958033	62958154	reg1007926.p1	12.150	+	TSC_hg19_v1_chr17_-_62915587 AK294371	-42497	-	AB011135 NM_199340	-43191	-	AB384498 TSC_hg19_v1_chr17_-_62893379 BC043145 BC048966	-64702	-	TSC_hg19_v1_chr17_-_62971685 BX537538 AK056627 BC063466 AK311317	13527	-	TSC_hg19_v1_chr17_-_63009302 AK026902	51213	-	TSC_hg19_v1_chr17_-_63052724 AB528470 AF493902 CU691408 DQ893572 DQ894448 AK313672	94625	-	AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3##NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC043145|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC048966|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BX537538|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK056627|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##BC063466|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK311317|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AF493902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ893572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ894448|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AK313672|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	0.099526	
chr18	24597999	24598124	reg1008622.p1	12.150	+	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	-152345	-	U63623 NM_004028	-155507	-	AF542549 NM_198991	-377754	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	124818	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	167172	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	1158976	-	AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##U63623|AQP4|361|aquaporin 4##NM_004028|AQP4|361|aquaporin 4##AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	0.0	
chrX	114999300	114999460	reg1006155.p1	12.150	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-171512	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-202338	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-203774	+	BC003645 TSC_hg19_v1_chrX_-_115085443	86059	-	AK313927 NM_000686 X87723 U16957	302615	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	568387	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:20:0.429
chr15	93226811	93226930	reg1006577.p1	12.148	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	-27991	-	AK057393 NM_153040	-211964	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	-289671	+	BC110328 TSC_hg19_v1_chr15_-_93277463	50519	-	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	216616	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	216710	+	BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC110328|FAM174B|400451|family with sequence similarity 174, member B##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2	0.97354	CTCF.p2:16:0.974
chr12	24989422	24989574	reg1007760.p1	12.147	+	BC104436 BC104437 TSC_hg19_v1_chr12_-_24737100 AK057456	-252405	-	TSC_hg19_v1_chr12_-_24715349 AB081588 NM_152989 BC060773	-274133	-	BC014929 TSC_hg19_v1_chr12_-_24103967 AK303970	-885537	-	TSC_hg19_v1_chr12_-_25055230 CR749308 BC033864 NM_001178094	65776	-	TSC_hg19_v1_chr12_-_25055966 AK294879 NM_001178093	66489	-	TSC_hg19_v1_chr12_-_25101988 AK299088	112458	-	BC104436|LINC00477|144360|long intergenic non-protein coding RNA 477##BC104437|LINC00477|144360|long intergenic non-protein coding RNA 477##AK057456|LINC00477|144360|long intergenic non-protein coding RNA 477##AB081588|SOX5|6660|SRY (sex determining region Y)-box 5##NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5##BC060773|SOX5|6660|SRY (sex determining region Y)-box 5##BC014929|SOX5|6660|SRY (sex determining region Y)-box 5##AK303970|SOX5|6660|SRY (sex determining region Y)-box 5##CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK294879|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178093|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK299088|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	0.980075	CTCF.p2:6:0.980
chr13	31439612	31439729	reg1006006.p1	12.147	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	-129955	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	-130006	+	AK314143 NM_001204406	-152056	+	NM_032849 AK055635 TSC_hg19_v1_chr13_+_31480407 AL832478 BC040165 BC101624 BC101626 CU691826	40810	+	TSC_hg19_v1_chr13_+_31506809 BC030277 NM_152325 CU688876	67160	+	CU691504 DQ891727 DQ894904 AF039695 TSC_hg19_v1_chr13_-_31735849	296124	-	BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_032849|C13orf33|84935|chromosome 13 open reading frame 33##AK055635|C13orf33|84935|chromosome 13 open reading frame 33##BC040165|C13orf33|84935|chromosome 13 open reading frame 33##BC101624|C13orf33|84935|chromosome 13 open reading frame 33##BC101626|C13orf33|84935|chromosome 13 open reading frame 33##BC030277|C13orf26|122046|chromosome 13 open reading frame 26##NM_152325|C13orf26|122046|chromosome 13 open reading frame 26##DQ891727|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ894904|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AF039695|HSPH1|10808|heat shock 105kDa/110kDa protein 1	0.92299	CTCF.p2:2:0.923
chr20	33111017	33111137	reg1007151.p1	12.147	+	TSC_hg19_v1_chr20_+_33104226 NM_014183 AF132750 BC002481 AF161511 AK294214 AF165516	-6861	+	TSC_hg19_v1_chr20_+_32951078 NM_031483 AK297809 AK304090 AK315212 BC011571 AB056663	-159985	+	AK097610 NM_001161766	-211470	-	NM_181509	23614	+	TSC_hg19_v1_chr20_+_33146525 NM_032514 AF276658 BC015810 AL833855 AB528175 BT007452 DQ893641 DQ895536 AM392590	35509	+	AK301900 AY339061 BC030512 EU831773 EU831851 TSC_hg19_v1_chr20_-_33264897 AB086842 AK308627 AK075507 AY358816	153833	-	NM_014183|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF132750|DYNLRB1|83658|dynein, light chain, roadblock-type 1##BC002481|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF161511|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AK294214|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF165516|DYNLRB1|83658|dynein, light chain, roadblock-type 1##NM_031483|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK297809|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK304090|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK315212|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##BC011571|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AB056663|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK097610|AHCY|191|adenosylhomocysteinase##NM_001161766|AHCY|191|adenosylhomocysteinase##NM_181509|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##NM_032514|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AF276658|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##BC015810|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AL833855|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##BT007452|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##DQ893641|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##DQ895536|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AM392590|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AK301900|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AY339061|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##BC030512|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##EU831773|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##EU831851|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AB086842|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AK308627|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AK075507|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AY358816|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	0.760736	CTCF.p2:8:0.761
chr4	142054686	142054815	reg1006146.p2	12.147	+	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	-219	-	NM_015130 TSC_hg19_v1_chr4_-_141677529	-377251	-	U28480 BC069556 BC096736 BC098168 BC098258 BC098352 NM_021833	-564830	-	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	87305	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	87336	+	AK290619 NM_000585 NM_172175 BC018149 U14407	503016	+	AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)##U28480|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC069556|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC096736|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098168|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098258|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098352|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##NM_021833|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15	0.0	
chr7	131734610	131734729	reg1007302.p2	12.147	+	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	-493306	-	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-722030	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	-722063	+	TSC_hg19_v1_chr7_-_131833385 AL834504	98726	-	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	458251	-	AK123428 TSC_hg19_v1_chr7_-_132261230	526561	-	BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AL834504|PLXNA4|91584|plexin A4##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4##AK123428|PLXNA4|91584|plexin A4	0.994986	CTCF.p2:-1:0.995
chr13	51700020	51700139	reg1008077.p1	12.146	+	BC001397 BC005088 BC007332 BC010174 TSC_hg19_v1_chr13_+_51484193	-215922	+	TSC_hg19_v1_chr13_+_51483926 AK021774 AK223340 BC036744	-216125	+	TSC_hg19_v1_chr13_+_51483905 AY764036	-216175	+	TSC_hg19_v1_chr13_+_51796507 BC034497 NM_001242312 NM_145019 AK055269 AK096364 BC051771 AB527542 CU690842	96437	+	AX772926 NM_001101320 AM402969	215116	+	AF097645 BC039829 BC018725 BC013358 BC032386 TSC_hg19_v1_chr13_-_52027173 AK296801 AK304218	327074	-	BC001397|RNASEH2B|79621|ribonuclease H2, subunit B##BC005088|RNASEH2B|79621|ribonuclease H2, subunit B##BC007332|RNASEH2B|79621|ribonuclease H2, subunit B##BC010174|RNASEH2B|79621|ribonuclease H2, subunit B##AK021774|RNASEH2B|79621|ribonuclease H2, subunit B##AK223340|RNASEH2B|79621|ribonuclease H2, subunit B##BC036744|RNASEH2B|79621|ribonuclease H2, subunit B##AY764036|RNASEH2B|79621|ribonuclease H2, subunit B##BC034497|FAM124A|220108|family with sequence similarity 124A##NM_001242312|FAM124A|220108|family with sequence similarity 124A##NM_145019|FAM124A|220108|family with sequence similarity 124A##AK055269|FAM124A|220108|family with sequence similarity 124A##AK096364|FAM124A|220108|family with sequence similarity 124A##BC051771|FAM124A|220108|family with sequence similarity 124A##AX772926|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##NM_001101320|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AM402969|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AF097645|INTS6|26512|integrator complex subunit 6##BC039829|INTS6|26512|integrator complex subunit 6##BC018725|INTS6|26512|integrator complex subunit 6##BC013358|INTS6|26512|integrator complex subunit 6##BC032386|INTS6|26512|integrator complex subunit 6##AK296801|INTS6|26512|integrator complex subunit 6##AK304218|INTS6|26512|integrator complex subunit 6	0.727101	CTCF.p2:-11:0.727
chr11	3876222	3876349	reg1006669.p2	12.145	+	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	-14086	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	-14130	-	NM_014489 AF159615	-46511	+	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	644	+	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	239704	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	239781	+	X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##NM_014489|PGAP2|27315|post-GPI attachment to proteins 2##AF159615|PGAP2|27315|post-GPI attachment to proteins 2##NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1	0.898816	CTCF.p2:-2:0.899
chr10	61382193	61382312	reg1005923.p2	12.144	+	AK299924 NM_001143773	-259592	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-259967	-	AL365474 NM_001143774 AM393181	-444964	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	87472	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	283949	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	284072	-	AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6	0.899809	CTCF.p2:17:0.900
chr11	13232050	13232162	reg1005592.p1	12.144	+	TSC_hg19_v1_chr11_+_13030883 NM_001080521	-201182	+	TSC_hg19_v1_chr11_+_12960793 AK075236	-271295	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	-536143	+	TSC_hg19_v1_chr11_+_13299288 NM_001030272 NM_001030273 NM_001178	67186	+	TSC_hg19_v1_chr11_+_13299331 AK315174	67226	+	BC041129 TSC_hg19_v1_chr11_+_13299351 AK291510	67252	+	NM_001080521|RASSF10|644943|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_001030272|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001030273|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001178|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK315174|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##BC041129|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK291510|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like	0.935536	CTCF.p2:-24:0.936
chr5	82860085	82860183	reg1006645.p1	12.144	+	NM_001126336 NM_001164097 NM_001164098 NM_004385 TSC_hg19_v1_chr5_+_82767562 U16306 U26555 X15998 AK307642 AB209491 BC050524 D32039	-92517	+	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	-486751	+	TSC_hg19_v1_chr5_-_82373255 NM_174909	-486872	-	AK313713 NM_001884 X17405 X78076 X78075	156800	-	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	820112	-	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	820530	-	NM_001126336|VCAN|1462|versican##NM_001164097|VCAN|1462|versican##NM_001164098|VCAN|1462|versican##NM_004385|VCAN|1462|versican##U16306|VCAN|1462|versican##U26555|VCAN|1462|versican##X15998|VCAN|1462|versican##AK307642|VCAN|1462|versican##AB209491|VCAN|1462|versican##BC050524|VCAN|1462|versican##D32039|VCAN|1462|versican##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_174909|TMEM167A|153339|transmembrane protein 167A##AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	0.974438	CTCF.p2:0:0.974
chr11	78128019	78128139	reg1005489.p2	12.142	+	AB011143 BC152459 NM_012296	-75154	-	AK056231 NM_020798 AK301048 AK307875 TSC_hg19_v1_chr11_+_77899953	-228154	+	TSC_hg19_v1_chr11_-_77899673 AK300320 BC036058 NM_001029859 AK095233	-228423	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	727	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	797	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	157713	-	AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##AK056231|USP35|57558|ubiquitin specific peptidase 35##NM_020798|USP35|57558|ubiquitin specific peptidase 35##AK301048|USP35|57558|ubiquitin specific peptidase 35##AK307875|USP35|57558|ubiquitin specific peptidase 35##AK300320|KCTD21|283219|potassium channel tetramerisation domain containing 21##BC036058|KCTD21|283219|potassium channel tetramerisation domain containing 21##NM_001029859|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK095233|KCTD21|283219|potassium channel tetramerisation domain containing 21##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##NM_080491|GAB2|9846|GRB2-associated binding protein 2##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)	0.0	
chr1	47191046	47191152	reg1006813.p1	12.142	+	TSC_hg19_v1_chr1_-_47184796 AK296777	-6283	-	TSC_hg19_v1_chr1_-_47184742 AB007963 NM_014774	-6363	-	NM_001145474 BC067853 BC057818 BC126318 BC144026 BC144027 FJ211596	-53548	+	AK300921 NM_000779 NM_001099772 AK225576 AK225578 AK313170 BC017758 AK307715 J02871 DQ892010 DQ895199 CU676044 AF491285 AY064484 AY064485 AY064486 AY151048 AY151049 X16699	73612	+	TSC_hg19_v1_chr1_-_47407139 AK298267 AK298413 CU692736 D26481 D13705 L04751 BC041158 S67580 S67581	216018	-	TSC_hg19_v1_chr1_-_47407149 BC022851 NM_000778	216049	-	AB007963|KIAA0494|9813|KIAA0494##NM_014774|KIAA0494|9813|KIAA0494##NM_001145474|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)##BC067853|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)##BC057818|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)##BC126318|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)##BC144026|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)##BC144027|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)##FJ211596|ATPAF1-AS1|374973|ATPAF1 antisense RNA 1 (non-protein coding)##AK300921|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##NM_000779|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##NM_001099772|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK225576|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK225578|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK313170|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##BC017758|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK307715|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##J02871|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##DQ892010|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##DQ895199|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AF491285|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY064484|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY064485|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY064486|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY151048|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY151049|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##X16699|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK298267|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##AK298413|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##D26481|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##D13705|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##L04751|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC041158|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##S67580|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##S67581|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC022851|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##NM_000778|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11	0.998559	CTCF.p2:2:0.999
chr2	228523095	228523219	reg1006885.p1	12.142	+	AM393148 AM393273 BC131618 AL359944 CR749679 AK055355 NM_001162483 NM_020161	-25239	-	TSC_hg19_v1_chr2_+_228356287 AK295030	-166866	+	TSC_hg19_v1_chr2_+_228336877 NM_001135187 NM_001135188 NM_001135189 NM_004504 BC030592 X89478 BC096272 BC096273 BC096274 BC096275 AB527534 CU688928	-186151	+	AF271633 BC032014 AK301490 AF283317 AK312464 NM_025243	59564	-	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	155434	+	AK097409 NM_178821 BC036377 AK098821 AK301861	213195	+	AM393148|C2orf83|56918|chromosome 2 open reading frame 83##AM393273|C2orf83|56918|chromosome 2 open reading frame 83##BC131618|C2orf83|56918|chromosome 2 open reading frame 83##AL359944|C2orf83|56918|chromosome 2 open reading frame 83##CR749679|C2orf83|56918|chromosome 2 open reading frame 83##AK055355|C2orf83|56918|chromosome 2 open reading frame 83##NM_001162483|C2orf83|56918|chromosome 2 open reading frame 83##NM_020161|C2orf83|56918|chromosome 2 open reading frame 83##AK295030|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135187|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135188|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135189|AGFG1|3267|ArfGAP with FG repeats 1##NM_004504|AGFG1|3267|ArfGAP with FG repeats 1##BC030592|AGFG1|3267|ArfGAP with FG repeats 1##X89478|AGFG1|3267|ArfGAP with FG repeats 1##BC096272|AGFG1|3267|ArfGAP with FG repeats 1##BC096273|AGFG1|3267|ArfGAP with FG repeats 1##BC096274|AGFG1|3267|ArfGAP with FG repeats 1##BC096275|AGFG1|3267|ArfGAP with FG repeats 1##AF271633|SLC19A3|80704|solute carrier family 19, member 3##BC032014|SLC19A3|80704|solute carrier family 19, member 3##AK301490|SLC19A3|80704|solute carrier family 19, member 3##AF283317|SLC19A3|80704|solute carrier family 19, member 3##AK312464|SLC19A3|80704|solute carrier family 19, member 3##NM_025243|SLC19A3|80704|solute carrier family 19, member 3##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69	0.941715	CTCF.p2:-4:0.942
chr18	58216719	58216825	reg1006795.p2	12.141	+	AK314130 NM_005912	-176772	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-649543	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-852122	-	AF217289 BC101047 BC101048 BC101049 NM_031891	941002	+	AK096495 NM_173557	1343531	-	AF109219 TSC_hg19_v1_chr18_-_59854208	1637422	-	AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.0	
chr5	41708340	41708469	reg1006347.p1	12.141	+	AB464014 TSC_hg19_v1_chr5_-_41510701 AK127142 BX648329 NM_001005473	-197726	-	BC035723 NM_001115131	-446865	-	J05024 J04506 AK292509 TSC_hg19_v1_chr5_-_41213635 J05064 AK313673 NM_000065	-494815	-	AB528366 CR457049 CU679223 DQ891805 DQ894989 TSC_hg19_v1_chr5_-_41870488 AK312327	162070	-	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	162179	-	TSC_hg19_v1_chr5_-_41870706 NM_000436	162342	-	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BC035723|C6|729|complement component 6##NM_001115131|C6|729|complement component 6##J05024|C6|729|complement component 6##J04506|C6|729|complement component 6##AK292509|C6|729|complement component 6##J05064|C6|729|complement component 6##AK313673|C6|729|complement component 6##NM_000065|C6|729|complement component 6##CR457049|OXCT1|5019|3-oxoacid CoA transferase 1##DQ891805|OXCT1|5019|3-oxoacid CoA transferase 1##DQ894989|OXCT1|5019|3-oxoacid CoA transferase 1##AK312327|OXCT1|5019|3-oxoacid CoA transferase 1##BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1	0.361753	CTCF.p2:-13:0.362
chr6	117771151	117771289	reg1007722.p1	12.141	+	M34353 NM_002944 TSC_hg19_v1_chr6_-_117747031	-24189	-	AY056583 NM_153453 TSC_hg19_v1_chr6_+_117586720 AJ578053 NM_182645 BC100798 BC100799 BC118545 BC118622 BC069316 AK096878	-184409	+	BC039248 NM_173560	-572845	+	TSC_hg19_v1_chr6_+_117803805 BC035671 NM_173674 AK095973	32617	+	CU679397 TSC_hg19_v1_chr6_-_117923611 AF287894	152311	-	TSC_hg19_v1_chr6_-_117923643 BC009553 AY033606 AB209385	152413	-	M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##AY056583|VGLL2|245806|vestigial like 2 (Drosophila)##NM_153453|VGLL2|245806|vestigial like 2 (Drosophila)##AJ578053|VGLL2|245806|vestigial like 2 (Drosophila)##NM_182645|VGLL2|245806|vestigial like 2 (Drosophila)##BC100798|VGLL2|245806|vestigial like 2 (Drosophila)##BC100799|VGLL2|245806|vestigial like 2 (Drosophila)##BC118545|VGLL2|245806|vestigial like 2 (Drosophila)##BC118622|VGLL2|245806|vestigial like 2 (Drosophila)##BC069316|VGLL2|245806|vestigial like 2 (Drosophila)##AK096878|VGLL2|245806|vestigial like 2 (Drosophila)##BC039248|RFX6|222546|regulatory factor X, 6##NM_173560|RFX6|222546|regulatory factor X, 6##BC035671|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##NM_173674|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AK095973|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AF287894|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##BC009553|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AY033606|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AB209385|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing	0.937593	CTCF.p2:-19:0.938
chr12	52419545	52419696	reg1004959.p2	12.140	+	AK297526 NM_001202233	-3005	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	-18879	+	AK299496 NM_020327	-72457	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	25596	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	44134	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	44178	+	AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44	0.999857	CTCF.p2:-3:1.000
chr3	133142534	133142655	reg1006331.p1	12.140	+	NM_003571 BC113518 BC113520 HQ258421 U48224	-23736	+	TSC_hg19_v1_chr3_+_132757234 AY358381 BC000568	-385360	+	NM_001136469 NM_023943 TSC_hg19_v1_chr3_+_132757202	-385407	+	TSC_hg19_v1_chr3_+_133292443 NM_001134422 NM_017548	149882	+	TSC_hg19_v1_chr3_+_133292588 AF103803	149978	+	TSC_hg19_v1_chr3_+_133292835 BC007338	150200	+	NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin##HQ258421|BFSP2|8419|beaded filament structural protein 2, phakinin##U48224|BFSP2|8419|beaded filament structural protein 2, phakinin##AY358381|TMEM108|66000|transmembrane protein 108##BC000568|TMEM108|66000|transmembrane protein 108##NM_001136469|TMEM108|66000|transmembrane protein 108##NM_023943|TMEM108|66000|transmembrane protein 108##NM_001134422|CDV3|55573|CDV3 homolog (mouse)##NM_017548|CDV3|55573|CDV3 homolog (mouse)##AF103803|CDV3|55573|CDV3 homolog (mouse)##BC007338|CDV3|55573|CDV3 homolog (mouse)	0.999654	CTCF.p2:7:1.000
chr14	51066821	51066949	reg1006171.p1	12.138	+	AK312518 TSC_hg19_v1_chr14_+_51026862 AB385220 CU679803	-39968	+	NM_015915 NM_181598 AY032844 TSC_hg19_v1_chr14_+_51026833 AK223436 AK290185 BC010708	-40095	+	NM_001127713	-67086	+	AJ292969 AK023071 TSC_hg19_v1_chr14_-_51135016 AK290883	68055	-	BC020537 TSC_hg19_v1_chr14_-_51135025 BC006385 NM_021818 AK021500	68141	-	TSC_hg19_v1_chr14_-_51135048 AK225896 AK095903	68183	-	AK312518|ATL1|51062|atlastin GTPase 1##NM_015915|ATL1|51062|atlastin GTPase 1##NM_181598|ATL1|51062|atlastin GTPase 1##AY032844|ATL1|51062|atlastin GTPase 1##AK223436|ATL1|51062|atlastin GTPase 1##AK290185|ATL1|51062|atlastin GTPase 1##BC010708|ATL1|51062|atlastin GTPase 1##NM_001127713|ATL1|51062|atlastin GTPase 1##AJ292969|SAV1|60485|salvador homolog 1 (Drosophila)##AK023071|SAV1|60485|salvador homolog 1 (Drosophila)##AK290883|SAV1|60485|salvador homolog 1 (Drosophila)##BC020537|SAV1|60485|salvador homolog 1 (Drosophila)##BC006385|SAV1|60485|salvador homolog 1 (Drosophila)##NM_021818|SAV1|60485|salvador homolog 1 (Drosophila)##AK021500|SAV1|60485|salvador homolog 1 (Drosophila)##AK225896|SAV1|60485|salvador homolog 1 (Drosophila)##AK095903|SAV1|60485|salvador homolog 1 (Drosophila)	0.978534	CTCF.p2:-19:0.979
chr1	54326684	54326827	reg1008774.p1	12.138	+	AK001269 AL354612 AL354613 TSC_hg19_v1_chr1_-_54304168 BC003082 NM_001168551 NM_018087	-22590	-	DQ141696 AK302910 BX648031 TSC_hg19_v1_chr1_-_54304004 AK298909 AK295000	-22781	-	AK090634 AX746550 NM_147193	-126879	-	AL713668 TSC_hg19_v1_chr1_-_54355462 AK000823 BC064590 AK315183	28680	-	TSC_hg19_v1_chr1_-_54355476 NM_018982	28733	-	AK290780 BC017955 BC107170 BC107171 NM_000792 NM_001039715 NM_001039716 NM_213593 FJ002243 FJ002244 FJ002245 FJ002246 FJ002247 FJ002248 FJ002249 S48220 AY560374 AY560375 AY560376 AY560377 AY560378 AY560379 AY560380 AY560381 AY560382 AY560383	33116	+	AK001269|TMEM48|55706|transmembrane protein 48##AL354612|TMEM48|55706|transmembrane protein 48##AL354613|TMEM48|55706|transmembrane protein 48##BC003082|TMEM48|55706|transmembrane protein 48##NM_001168551|TMEM48|55706|transmembrane protein 48##NM_018087|TMEM48|55706|transmembrane protein 48##DQ141696|TMEM48|55706|transmembrane protein 48##AK302910|TMEM48|55706|transmembrane protein 48##BX648031|TMEM48|55706|transmembrane protein 48##AK298909|TMEM48|55706|transmembrane protein 48##AK295000|TMEM48|55706|transmembrane protein 48##AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1##AL713668|YIPF1|54432|Yip1 domain family, member 1##AK000823|YIPF1|54432|Yip1 domain family, member 1##BC064590|YIPF1|54432|Yip1 domain family, member 1##AK315183|YIPF1|54432|Yip1 domain family, member 1##NM_018982|YIPF1|54432|Yip1 domain family, member 1##AK290780|DIO1|1733|deiodinase, iodothyronine, type I##BC017955|DIO1|1733|deiodinase, iodothyronine, type I##BC107170|DIO1|1733|deiodinase, iodothyronine, type I##BC107171|DIO1|1733|deiodinase, iodothyronine, type I##NM_000792|DIO1|1733|deiodinase, iodothyronine, type I##NM_001039715|DIO1|1733|deiodinase, iodothyronine, type I##NM_001039716|DIO1|1733|deiodinase, iodothyronine, type I##NM_213593|DIO1|1733|deiodinase, iodothyronine, type I##FJ002243|DIO1|1733|deiodinase, iodothyronine, type I##FJ002244|DIO1|1733|deiodinase, iodothyronine, type I##AY560374|DIO1|1733|deiodinase, iodothyronine, type I##AY560375|DIO1|1733|deiodinase, iodothyronine, type I##AY560376|DIO1|1733|deiodinase, iodothyronine, type I##AY560377|DIO1|1733|deiodinase, iodothyronine, type I##AY560378|DIO1|1733|deiodinase, iodothyronine, type I##AY560379|DIO1|1733|deiodinase, iodothyronine, type I##AY560380|DIO1|1733|deiodinase, iodothyronine, type I##AY560381|DIO1|1733|deiodinase, iodothyronine, type I##AY560382|DIO1|1733|deiodinase, iodothyronine, type I##AY560383|DIO1|1733|deiodinase, iodothyronine, type I	1.04384	CTCF.p2:-13:0.999
chr4	170731619	170731738	reg1006770.p1	12.137	+	AB528091 AM392880 TSC_hg19_v1_chr4_-_170679066 AK000541 AL136673 BC010367 NM_017867	-52606	-	AK127483 NM_001243374 TSC_hg19_v1_chr4_+_170581295	-150423	+	TSC_hg19_v1_chr4_+_170541735 BC070318 AK304362 BC054877 BC026256 BC136510	-189821	+	BC066912 AF327560 AK308263 NM_001009554	193244	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	215827	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	279520	-	AM392880|C4orf27|54969|chromosome 4 open reading frame 27##AK000541|C4orf27|54969|chromosome 4 open reading frame 27##AL136673|C4orf27|54969|chromosome 4 open reading frame 27##BC010367|C4orf27|54969|chromosome 4 open reading frame 27##NM_017867|C4orf27|54969|chromosome 4 open reading frame 27##AK127483|CLCN3|1182|chloride channel 3##NM_001243374|CLCN3|1182|chloride channel 3##AK304362|CLCN3|1182|chloride channel 3##BC054877|CLCN3|1182|chloride channel 3##BC026256|CLCN3|1182|chloride channel 3##BC136510|CLCN3|1182|chloride channel 3##BC066912|MFAP3L|9848|microfibrillar-associated protein 3-like##AF327560|MFAP3L|9848|microfibrillar-associated protein 3-like##AK308263|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001009554|MFAP3L|9848|microfibrillar-associated protein 3-like##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase	0.952191	CTCF.p2:-4:0.952
chr8	130838585	130838695	reg1006803.p1	12.137	+	AB042405 NM_031415	-39507	-	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-2031857	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-2090150	+	BC003599 TSC_hg19_v1_chr8_-_130951934	113275	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	113366	-	BC016345 TSC_hg19_v1_chr8_-_131028667	190019	-	AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr4	38784580	38784698	reg1007042.p1	12.136	+	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	-40	-	AF289565 TSC_hg19_v1_chr4_-_38666549	-118150	-	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	-118813	+	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	21780	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	73789	-	TSC_hg19_v1_chr4_+_38869390 NM_138389 AK304050 AK296859 AK292831 BC040452	84752	+	AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AF289565|FLJ13197|79667|uncharacterized FLJ13197##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6##NM_138389|FAM114A1|92689|family with sequence similarity 114, member A1##AK304050|FAM114A1|92689|family with sequence similarity 114, member A1##AK296859|FAM114A1|92689|family with sequence similarity 114, member A1##AK292831|FAM114A1|92689|family with sequence similarity 114, member A1##BC040452|FAM114A1|92689|family with sequence similarity 114, member A1	0.0	
chr1	9023101	9023216	reg1009076.p1	12.135	+	NM_001215 AK300652 BC034350 M57892 AB102863 AB103091	-17225	+	AK309177 NM_001428	-84008	-	TSC_hg19_v1_chr1_-_8938746 AK223192 BX537400 AK309291 AK315417	-84396	-	AB527336 AY571960 NM_207420	63245	-	TSC_hg19_v1_chr1_-_9117554 AF451839 AF479408	94420	-	TSC_hg19_v1_chr1_-_9129605 DQ892291 DQ895491 CU674838 AK300091	106441	-	NM_001215|CA6|765|carbonic anhydrase VI##AK300652|CA6|765|carbonic anhydrase VI##BC034350|CA6|765|carbonic anhydrase VI##M57892|CA6|765|carbonic anhydrase VI##AB102863|CA6|765|carbonic anhydrase VI##AB103091|CA6|765|carbonic anhydrase VI##AK309177|ENO1|2023|enolase 1, (alpha)##NM_001428|ENO1|2023|enolase 1, (alpha)##AK223192|ENO1|2023|enolase 1, (alpha)##BX537400|ENO1|2023|enolase 1, (alpha)##AK309291|ENO1|2023|enolase 1, (alpha)##AK315417|ENO1|2023|enolase 1, (alpha)##AY571960|SLC2A7|155184|solute carrier family 2 (facilitated glucose transporter), member 7##NM_207420|SLC2A7|155184|solute carrier family 2 (facilitated glucose transporter), member 7##AF451839|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AF479408|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892291|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ895491|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK300091|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5	0.991102	CTCF.p2:-8:0.991
chr19	18223916	18224038	reg1008061.p1	12.135	+	TSC_hg19_v1_chr19_+_18208608 AB527184 NM_015016 AB011133	-15368	+	EU832463 EU832545 BC137404 BC137406 NM_005535 NM_153701 U03187 BC029121 TSC_hg19_v1_chr19_-_18197721 AK225919 AK290423	-26245	-	TSC_hg19_v1_chr19_+_18118978 AF193051 NM_015683 AK000689 AK128588 BC022516 AK314657 AB529119	-104959	+	BC063240 TSC_hg19_v1_chr19_+_18263972	40004	+	TSC_hg19_v1_chr19_+_18264004 BC070082 NM_005027 BC090249	40055	+	NM_006332 TSC_hg19_v1_chr19_+_18284600 AB049659 AK291551	60614	+	NM_015016|MAST3|23031|microtubule associated serine/threonine kinase 3##AB011133|MAST3|23031|microtubule associated serine/threonine kinase 3##EU832463|IL12RB1|3594|interleukin 12 receptor, beta 1##EU832545|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137404|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137406|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_005535|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_153701|IL12RB1|3594|interleukin 12 receptor, beta 1##U03187|IL12RB1|3594|interleukin 12 receptor, beta 1##BC029121|IL12RB1|3594|interleukin 12 receptor, beta 1##AK225919|IL12RB1|3594|interleukin 12 receptor, beta 1##AK290423|IL12RB1|3594|interleukin 12 receptor, beta 1##AF193051|ARRDC2|27106|arrestin domain containing 2##NM_015683|ARRDC2|27106|arrestin domain containing 2##AK000689|ARRDC2|27106|arrestin domain containing 2##AK128588|ARRDC2|27106|arrestin domain containing 2##BC022516|ARRDC2|27106|arrestin domain containing 2##AK314657|ARRDC2|27106|arrestin domain containing 2##BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_006332|IFI30|10437|interferon, gamma-inducible protein 30##AB049659|IFI30|10437|interferon, gamma-inducible protein 30##AK291551|IFI30|10437|interferon, gamma-inducible protein 30	0.991623	CTCF.p2:-2:0.992
chr10	71696018	71696084	reg1008669.p1	12.134	+	TSC_hg19_v1_chr10_+_71562275 M59217	-133760	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	-134362	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	-134394	+	NM_018649	116305	+	TSC_hg19_v1_chr10_+_71812601 BC016172 AK022776 AK131057 AF151534 AF336304 AK022475	116546	+	TSC_hg19_v1_chr10_-_71892569 AK027403	196497	-	M59217|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##NM_018649|H2AFY2|55506|H2A histone family, member Y2##BC016172|H2AFY2|55506|H2A histone family, member Y2##AK022776|H2AFY2|55506|H2A histone family, member Y2##AK131057|H2AFY2|55506|H2A histone family, member Y2##AF151534|H2AFY2|55506|H2A histone family, member Y2##AF336304|H2AFY2|55506|H2A histone family, member Y2##AK022475|H2AFY2|55506|H2A histone family, member Y2##AK027403|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2	0.025849	
chr2	25532355	25532495	reg1008292.p1	12.134	+	TSC_hg19_v1_chr2_-_25475127 AF480163 NM_153759	-57219	-	TSC_hg19_v1_chr2_-_25468920 AK025230	-63447	-	TSC_hg19_v1_chr2_-_25467080 BC023612	-65290	-	TSC_hg19_v1_chr2_-_25536762 AB527956 EU446951	4382	-	AF067972 TSC_hg19_v1_chr2_-_25564801 BC043617 NM_022552	32374	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	32903	-	AF480163|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_153759|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##EU446951|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF067972|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC043617|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_022552|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.989924	CTCF.p2:0:0.990
chr2	26553006	26553124	reg1008296.p1	12.134	+	AY140955 NM_001145168 AB527153 AK293887 NM_001145169	-11123	-	AF113209 TSC_hg19_v1_chr2_+_26467830 BC014572 AK293142 D16481 AK304455 AK302322 BC030824	-85231	+	TSC_hg19_v1_chr2_+_26467806 AK130072 AK314455	-85268	+	TSC_hg19_v1_chr2_+_26568975 NM_033505 AK095620	15876	+	AB051511 TSC_hg19_v1_chr2_+_26569010 AB621826 BC021229 BC015430 CU676884	15980	+	AK122995 AY358172 NM_153835	16582	-	AY140955|GPR113|165082|G protein-coupled receptor 113##NM_001145168|GPR113|165082|G protein-coupled receptor 113##AK293887|GPR113|165082|G protein-coupled receptor 113##NM_001145169|GPR113|165082|G protein-coupled receptor 113##AF113209|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##BC014572|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##AK293142|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##D16481|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##AK304455|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##AK302322|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##BC030824|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##AK130072|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##AK314455|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##NM_033505|EPT1|85465|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)##AK095620|EPT1|85465|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)##AB051511|EPT1|85465|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)##BC021229|EPT1|85465|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)##AK122995|GPR113|165082|G protein-coupled receptor 113##AY358172|GPR113|165082|G protein-coupled receptor 113##NM_153835|GPR113|165082|G protein-coupled receptor 113	0.933686	CTCF.p2:5:0.934
chr22	17372934	17373057	reg1006357.p2	12.133	+	BC137521 BC137522 BC144679 AY989815 AK098608 AY534240 BC045548 NM_175878	-70426	-	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	-299426	-	NM_001005239	-923192	-	AB076978 NM_001037814	116116	-	TSC_hg19_v1_chr22_+_17565850 NM_014339	192856	+	TSC_hg19_v1_chr22_+_17565906 BC011624	192907	+	BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_001005239|OR11H1|81061|olfactory receptor, family 11, subfamily H, member 1##AB076978|GAB4|128954|GRB2-associated binding protein family, member 4##NM_001037814|GAB4|128954|GRB2-associated binding protein family, member 4##NM_014339|IL17RA|23765|interleukin 17 receptor A##BC011624|IL17RA|23765|interleukin 17 receptor A	0.99859	CTCF.p2:7:0.999
chr9	101925219	101925366	reg1006596.p2	12.133	+	TSC_hg19_v1_chr9_+_101867472 AB384823 EF142853 EF142854	-57813	+	TSC_hg19_v1_chr9_+_101867401 AJ619019 L11695 NM_001130916 NM_004612	-57884	+	BC071181 TSC_hg19_v1_chr9_+_101867394	-57899	+	CU676096 DQ891989 DQ895179 TSC_hg19_v1_chr9_-_101984197 BC017876 AK027417 AK074704 AB161356	58900	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	58925	-	TSC_hg19_v1_chr9_-_101984233 NM_033087	58951	-	AJ619019|TGFBR1|7046|transforming growth factor, beta receptor 1##L11695|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_001130916|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_004612|TGFBR1|7046|transforming growth factor, beta receptor 1##BC071181|TGFBR1|7046|transforming growth factor, beta receptor 1##DQ891989|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##DQ895179|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##BC017876|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK027417|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074704|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AB161356|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)	0.165226	
chr16	88882557	88882658	reg1004409.p1	12.132	+	TSC_hg19_v1_chr16_-_88878337 BC107151 CR749423 NM_000485 NM_001030018	-4272	-	TSC_hg19_v1_chr16_+_88870215 AF321125 BC000137 BC009410 BC008860 BC008676	-12327	+	AB053172 NM_030928 TSC_hg19_v1_chr16_+_88870207	-12410	+	AK308269 BX649181 AK310392 TSC_hg19_v1_chr16_-_88923340	40681	-	AK294390 TSC_hg19_v1_chr16_-_88923352 AK312655 BC056151 BC050684 NM_000512 BC018027	40763	-	TSC_hg19_v1_chr16_+_88923536 NM_016209 AF089106 AX771012 AK311885 BC105809 AK126779 AF161524 AK310805 AX771013 BC018024 AX771014 BC011369	40916	+	BC107151|APRT|353|adenine phosphoribosyltransferase##CR749423|APRT|353|adenine phosphoribosyltransferase##NM_000485|APRT|353|adenine phosphoribosyltransferase##NM_001030018|APRT|353|adenine phosphoribosyltransferase##AF321125|CDT1|81620|chromatin licensing and DNA replication factor 1##BC000137|CDT1|81620|chromatin licensing and DNA replication factor 1##BC009410|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008860|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008676|CDT1|81620|chromatin licensing and DNA replication factor 1##AB053172|CDT1|81620|chromatin licensing and DNA replication factor 1##NM_030928|CDT1|81620|chromatin licensing and DNA replication factor 1##AK308269|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BX649181|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK310392|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK294390|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK312655|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC056151|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC050684|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##NM_000512|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC018027|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##NM_016209|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF089106|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771012|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK311885|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC105809|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK126779|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF161524|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK310805|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771013|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC018024|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771014|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC011369|TRAPPC2L|51693|trafficking protein particle complex 2-like	0.995381	CTCF.p2:-12:0.981
chr17	65685789	65685909	reg1004700.p1	12.132	+	BC007905 NM_012417 NM_181671	-311926	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-312261	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-312440	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	28201	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	135853	+	AK293224 TSC_hg19_v1_chr17_+_65822221	136368	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.999541	CTCF.p2:17:1.000
chr2	192677001	192677117	reg1006868.p1	12.132	+	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	-134197	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-566961	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-660752	-	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	34679	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	34912	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	382255	-	NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2	0.968348	CTCF.p2:-18:0.968
chr7	38700216	38700356	reg1008176.p1	12.132	+	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	-29209	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	-29324	-	TSC_hg19_v1_chr7_-_38389583 BC035592	-310697	-	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	248507	-	NM_001166018 NM_007252	317322	+	TSC_hg19_v1_chr7_+_39606002 AK314937 NM_020192 AK293511 AF226046 BC022043 CR457198 DQ892829 DQ896074 DQ896075	905683	+	X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin##BC035592|TRGV5|6978|T cell receptor gamma variable 5##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_001166018|POU6F2|11281|POU class 6 homeobox 2##NM_007252|POU6F2|11281|POU class 6 homeobox 2##AK314937|YAE1D1|57002|Yae1 domain containing 1##NM_020192|YAE1D1|57002|Yae1 domain containing 1##AF226046|YAE1D1|57002|Yae1 domain containing 1##BC022043|YAE1D1|57002|Yae1 domain containing 1##CR457198|YAE1D1|57002|Yae1 domain containing 1##DQ892829|YAE1D1|57002|Yae1 domain containing 1##DQ896074|YAE1D1|57002|Yae1 domain containing 1##DQ896075|YAE1D1|57002|Yae1 domain containing 1	0.220063	CTCF.p2:15:0.220
chr17	53426264	53426367	reg1005555.p1	12.131	+	TSC_hg19_v1_chr17_+_53344967 AK295726 AK074289	-81329	+	AK290043 TSC_hg19_v1_chr17_+_53343204	-83128	+	TSC_hg19_v1_chr17_+_53342370 BC036093 M95585	-83874	+	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	72940	-	BC010128 AK001832 NM_018286	373834	-	AK095175 NM_001099640	383147	-	AK295726|HLF|3131|hepatic leukemia factor##AK074289|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor##BC036093|HLF|3131|hepatic leukemia factor##M95585|HLF|3131|hepatic leukemia factor##CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100	0.888597	CTCF.p2:3:0.889
chr18	52901987	52902120	reg1007708.p1	12.131	+	AF273051 TSC_hg19_v1_chr18_-_52626693 BC029508 NM_025214	-275366	-	AK058097 NM_001143829	-276775	-	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	-406315	+	FR748222 NM_001243236	67729	-	M74718 FR748220 FR748221 AK300038 NM_001243234 NM_001243235	86949	-	FR748209 M74720 AB209741 TSC_hg19_v1_chr18_-_53068920 AK300636	166785	-	AF273051|CCDC68|80323|coiled-coil domain containing 68##BC029508|CCDC68|80323|coiled-coil domain containing 68##NM_025214|CCDC68|80323|coiled-coil domain containing 68##AK058097|CCDC68|80323|coiled-coil domain containing 68##NM_001143829|CCDC68|80323|coiled-coil domain containing 68##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family##FR748222|TCF4|6925|transcription factor 4##NM_001243236|TCF4|6925|transcription factor 4##M74718|TCF4|6925|transcription factor 4##FR748220|TCF4|6925|transcription factor 4##FR748221|TCF4|6925|transcription factor 4##AK300038|TCF4|6925|transcription factor 4##NM_001243234|TCF4|6925|transcription factor 4##NM_001243235|TCF4|6925|transcription factor 4##FR748209|TCF4|6925|transcription factor 4##AB209741|TCF4|6925|transcription factor 4##AK300636|TCF4|6925|transcription factor 4	0.876282	CTCF.p2:-13:0.876
chr2	65800372	65800506	reg1007338.p1	12.131	+	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	-136602	+	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	-140763	-	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	-141227	-	AL832770 BC043503 NM_002398	862084	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	862401	+	TSC_hg19_v1_chr2_+_66666452 AK297109	866011	+	AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein##BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AL832770|MEIS1|4211|Meis homeobox 1##BC043503|MEIS1|4211|Meis homeobox 1##NM_002398|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##AK297109|MEIS1|4211|Meis homeobox 1	0.961937	CTCF.p2:16:0.962
chr4	78161771	78161902	reg1009137.p1	12.131	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-82343	+	TSC_hg19_v1_chr4_+_78078398 U47414	-83376	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	-83475	+	AF044197 NM_006419	271069	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	578708	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	622078	+	L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1	0.998938	CTCF.p2:-1:0.999
chr17	74812766	74812876	reg1006904.p1	12.130	+	TSC_hg19_v1_chr17_+_74734111 AK308058 AF015184 AK000233	-78668	+	AF015183 NM_001242532 NM_001242533 NM_001242535 NM_001242536 NM_001242537 NM_024311	-79296	+	TSC_hg19_v1_chr17_-_74733465 AK124792 NM_001195427 NM_003016	-79365	-	TSC_hg19_v1_chr17_+_74864556 AK057861 AB235153 BC041577 NM_001199172 NM_144677 BC062354	51845	+	AB114297 NM_198955 BC144361	55939	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	271976	+	AK308058|MFSD11|79157|major facilitator superfamily domain containing 11##AF015184|MFSD11|79157|major facilitator superfamily domain containing 11##AK000233|MFSD11|79157|major facilitator superfamily domain containing 11##AF015183|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242532|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242533|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242535|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242536|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242537|MFSD11|79157|major facilitator superfamily domain containing 11##NM_024311|MFSD11|79157|major facilitator superfamily domain containing 11##AK124792|SRSF2|6427|serine/arginine-rich splicing factor 2##NM_001195427|SRSF2|6427|serine/arginine-rich splicing factor 2##NM_003016|SRSF2|6427|serine/arginine-rich splicing factor 2##AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338	0.933476	CTCF.p2:-19:0.933
chr2	40140858	40140970	reg1006160.p1	12.130	+	TSC_hg19_v1_chr2_-_40006408 NM_025264	-134500	-	TSC_hg19_v1_chr2_-_40006399 CU678598 EU831465 EU831552 AK301353 AK298178 AK226034 BC004163 BC013299 AK307754 AL832115 AK093580 AX748213 AK292002	-134620	-	TSC_hg19_v1_chr2_+_39893056 NM_152390 AK075440 BC029530 AY358773 DQ890996	-247847	+	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	516517	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	538308	-	Y12878 Y12885 AK291696 BX537482 NM_001112802	598658	-	NM_025264|THUMPD2|80745|THUMP domain containing 2##EU831465|THUMPD2|80745|THUMP domain containing 2##EU831552|THUMPD2|80745|THUMP domain containing 2##AK301353|THUMPD2|80745|THUMP domain containing 2##AK298178|THUMPD2|80745|THUMP domain containing 2##AK226034|THUMPD2|80745|THUMP domain containing 2##BC004163|THUMPD2|80745|THUMP domain containing 2##BC013299|THUMPD2|80745|THUMP domain containing 2##AK307754|THUMPD2|80745|THUMP domain containing 2##AL832115|THUMPD2|80745|THUMP domain containing 2##AK093580|THUMPD2|80745|THUMP domain containing 2##AK292002|THUMPD2|80745|THUMP domain containing 2##NM_152390|TMEM178|130733|transmembrane protein 178##AK075440|TMEM178|130733|transmembrane protein 178##BC029530|TMEM178|130733|transmembrane protein 178##AY358773|TMEM178|130733|transmembrane protein 178##DQ890996|TMEM178|130733|transmembrane protein 178##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	0.993025	CTCF.p2:-12:0.993
chr4	68414986	68415111	reg1006425.p2	12.130	+	TSC_hg19_v1_chr4_-_68411282 NM_001812	-3770	-	TSC_hg19_v1_chr4_-_68411224 BC030695 BX648166 BC041117 AK307928 AK308170 M95724	-3840	-	CU688992 TSC_hg19_v1_chr4_-_68411171	-3925	-	TSC_hg19_v1_chr4_+_68424444 AB023483 NM_012108 AK313676 BC014958 AB528919 CU677135	9437	+	TSC_hg19_v1_chr4_-_68566842 AB014773 AB463334 AM392673 EF623993	151770	-	TSC_hg19_v1_chr4_-_68566867 AL832015 AL832458 AK094969 AK314371 BC031637 BC126484 BC126486 NM_018227	151823	-	NM_001812|CENPC1|1060|centromere protein C 1##BC030695|CENPC1|1060|centromere protein C 1##BX648166|CENPC1|1060|centromere protein C 1##BC041117|CENPC1|1060|centromere protein C 1##AK307928|CENPC1|1060|centromere protein C 1##AK308170|CENPC1|1060|centromere protein C 1##M95724|CENPC1|1060|centromere protein C 1##AB023483|STAP1|26228|signal transducing adaptor family member 1##NM_012108|STAP1|26228|signal transducing adaptor family member 1##AK313676|STAP1|26228|signal transducing adaptor family member 1##BC014958|STAP1|26228|signal transducing adaptor family member 1##AB014773|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AM392673|UBA6|55236|ubiquitin-like modifier activating enzyme 6##EF623993|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AL832015|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AL832458|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK094969|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK314371|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC031637|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC126484|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC126486|UBA6|55236|ubiquitin-like modifier activating enzyme 6##NM_018227|UBA6|55236|ubiquitin-like modifier activating enzyme 6	0.041903	
chr14	102563022	102563161	reg1007352.p1	12.129	+	TSC_hg19_v1_chr14_-_102553513 NM_005348	-9585	-	TSC_hg19_v1_chr14_-_102553382 AJ890083 X07270 BC017233 BC001695 AK129557 AK291115 AK291607 AK300126 AK310595 BC121062 X15183	-9727	-	TSC_hg19_v1_chr14_+_102430909 AB002323 AB527134	-132130	+	TSC_hg19_v1_chr14_-_102606024 BX248761 AJ890082 AK056446 NM_001017963	42948	-	TSC_hg19_v1_chr14_+_102606250 NM_001242414 NM_001242415 NM_001242416 NM_001242417 NM_001242418 NM_144574 NM_181291 NM_181308 BC030654 AK090580 AK225852 BC028387 AK090978 AX746714 AK297727 AL832242 AL832500 CU688486 DQ891530 DQ894719 EU831767 EU831845 AF327354 BX248274	43119	+	TSC_hg19_v1_chr14_-_102771492 AK094747 BC053536 BC026069 AK302349 AK312778 AB022694 NM_014226	208408	-	NM_005348|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AJ890083|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##X07270|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC017233|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC001695|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK129557|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK291115|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK291607|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK300126|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK310595|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC121062|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##X15183|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AB002323|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##BX248761|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AJ890082|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK056446|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##NM_001017963|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##NM_001242414|WDR20|91833|WD repeat domain 20##NM_001242415|WDR20|91833|WD repeat domain 20##NM_001242416|WDR20|91833|WD repeat domain 20##NM_001242417|WDR20|91833|WD repeat domain 20##NM_001242418|WDR20|91833|WD repeat domain 20##NM_144574|WDR20|91833|WD repeat domain 20##NM_181291|WDR20|91833|WD repeat domain 20##NM_181308|WDR20|91833|WD repeat domain 20##BC030654|WDR20|91833|WD repeat domain 20##AK090580|WDR20|91833|WD repeat domain 20##AK225852|WDR20|91833|WD repeat domain 20##BC028387|WDR20|91833|WD repeat domain 20##AK090978|WDR20|91833|WD repeat domain 20##AK297727|WDR20|91833|WD repeat domain 20##AL832242|WDR20|91833|WD repeat domain 20##AL832500|WDR20|91833|WD repeat domain 20##DQ891530|WDR20|91833|WD repeat domain 20##DQ894719|WDR20|91833|WD repeat domain 20##EU831767|WDR20|91833|WD repeat domain 20##EU831845|WDR20|91833|WD repeat domain 20##AF327354|WDR20|91833|WD repeat domain 20##BX248274|WDR20|91833|WD repeat domain 20##AK094747|MOK|5891|MOK protein kinase##BC053536|MOK|5891|MOK protein kinase##BC026069|MOK|5891|MOK protein kinase##AK302349|MOK|5891|MOK protein kinase##AK312778|MOK|5891|MOK protein kinase##AB022694|MOK|5891|MOK protein kinase##NM_014226|MOK|5891|MOK protein kinase	0.989889	CTCF.p2:10:0.990
chr4	81961317	81961441	reg1008503.p1	12.129	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	-9237	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-704482	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	-773520	+	AB528214 D70899 NM_006259 X94612	164828	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	431604	-	TSC_hg19_v1_chr4_-_82393062 AK291459 BC036784 AK303625 AK056257 NM_152545	431681	-	M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B##AK291459|RASGEF1B|153020|RasGEF domain family, member 1B##BC036784|RASGEF1B|153020|RasGEF domain family, member 1B##AK303625|RASGEF1B|153020|RasGEF domain family, member 1B##AK056257|RASGEF1B|153020|RasGEF domain family, member 1B##NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B	0.666828	CTCF.p2:19:0.667
chr9	2857704	2857853	reg1008119.p1	12.129	+	TSC_hg19_v1_chr9_-_2844102 AK315531 NM_014878	-13665	-	TSC_hg19_v1_chr9_-_2844084 AL832245 AK225953 AL832239	-13689	-	TSC_hg19_v1_chr9_-_2844074 AK292169 BC020598	-13706	-	AK127804 TSC_hg19_v1_chr9_-_3223066	365258	-	TSC_hg19_v1_chr9_-_3525889 AK310956 AK289540	668061	-	TSC_hg19_v1_chr9_-_3525983 BC022191 NM_002919 NM_134428	668226	-	AK315531|KIAA0020|9933|KIAA0020##NM_014878|KIAA0020|9933|KIAA0020##AL832245|KIAA0020|9933|KIAA0020##AK225953|KIAA0020|9933|KIAA0020##AL832239|KIAA0020|9933|KIAA0020##AK292169|KIAA0020|9933|KIAA0020##AK310956|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK289540|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##BC022191|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_002919|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_134428|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)	0.999852	CTCF.p2:6:1.000
chr12	110213207	110213329	reg1006556.p2	12.127	+	TSC_hg19_v1_chr12_+_110205819 AK074806	-7404	+	NM_032829 BC020193	-61081	+	M88468 AB209722 TSC_hg19_v1_chr12_+_110011620 AK315678 AK293130 AK295338 BC016140	-201637	+	AB073669 AB100308 AF258465 AF263523 DQ059644 DQ059645 DQ059646 NM_001177431 AB590809 NM_001177428 NM_001177433 NM_147204 AB032427	39379	-	TSC_hg19_v1_chr12_-_110271182 AL834192	57919	-	BC117426 BC143307 BC143315 TSC_hg19_v1_chr12_-_110271207 AJ296305 NM_021625	57940	-	AK074806|C12orf34|84915|chromosome 12 open reading frame 34##NM_032829|C12orf34|84915|chromosome 12 open reading frame 34##BC020193|C12orf34|84915|chromosome 12 open reading frame 34##M88468|MVK|4598|mevalonate kinase##AB209722|MVK|4598|mevalonate kinase##AK315678|MVK|4598|mevalonate kinase##AK293130|MVK|4598|mevalonate kinase##AK295338|MVK|4598|mevalonate kinase##BC016140|MVK|4598|mevalonate kinase##AB073669|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB100308|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AF258465|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AF263523|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059644|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059645|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059646|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177431|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177428|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177433|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_147204|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB032427|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AL834192|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC117426|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143307|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143315|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AJ296305|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_021625|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4	0.788594	CTCF.p2:2:0.789
chr7	75892375	75892520	reg1009291.p1	12.124	+	TSC_hg19_v1_chr7_+_75831199 NM_001110199 BC029292	-61242	+	BC001917 TSC_hg19_v1_chr7_+_75677453 AK316587 DQ893080 DQ896341 AK293460 CR536548	-214982	+	AK095803 AK290779 TSC_hg19_v1_chr7_+_75677402	-215045	+	TSC_hg19_v1_chr7_+_75931989 NM_001540 U90906 BC000510 BC012292 AF086135 X54079 AK296890	39462	+	AK311894 TSC_hg19_v1_chr7_+_75931991 BC012768 BC073768 AB020027 AL050380 DQ891304 DQ893349 DQ894489 DQ896669 AB528488 BT019888 CR407614 CR536489 BC014920	39583	+	TSC_hg19_v1_chr7_+_75932877 AK311446	40463	+	NM_001110199|SRRM3|222183|serine/arginine repetitive matrix 3##BC029292|SRRM3|222183|serine/arginine repetitive matrix 3##BC001917|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK316587|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ893080|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ896341|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK293460|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##CR536548|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK095803|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK290779|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##NM_001540|HSPB1|3315|heat shock 27kDa protein 1##U90906|HSPB1|3315|heat shock 27kDa protein 1##BC000510|HSPB1|3315|heat shock 27kDa protein 1##BC012292|HSPB1|3315|heat shock 27kDa protein 1##X54079|HSPB1|3315|heat shock 27kDa protein 1##AK296890|HSPB1|3315|heat shock 27kDa protein 1##AK311894|HSPB1|3315|heat shock 27kDa protein 1##BC012768|HSPB1|3315|heat shock 27kDa protein 1##BC073768|HSPB1|3315|heat shock 27kDa protein 1##AB020027|HSPB1|3315|heat shock 27kDa protein 1##AL050380|HSPB1|3315|heat shock 27kDa protein 1##DQ891304|HSPB1|3315|heat shock 27kDa protein 1##DQ893349|HSPB1|3315|heat shock 27kDa protein 1##DQ894489|HSPB1|3315|heat shock 27kDa protein 1##DQ896669|HSPB1|3315|heat shock 27kDa protein 1##BT019888|HSPB1|3315|heat shock 27kDa protein 1##CR407614|HSPB1|3315|heat shock 27kDa protein 1##CR536489|HSPB1|3315|heat shock 27kDa protein 1##BC014920|HSPB1|3315|heat shock 27kDa protein 1##AK311446|HSPB1|3315|heat shock 27kDa protein 1	0.996896	CTCF.p2:-4:0.997
chr12	104026480	104026593	reg1004898.p1	12.123	+	AY311388 AJ295695 NM_017564 AB052958	-45475	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	-136790	-	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-674444	+	AB032773 TSC_hg19_v1_chr12_-_104234857	208288	-	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	208443	-	TSC_hg19_v1_chr12_+_104324159 AJ890084 AK025459	297622	+	AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3##AJ890084|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK025459|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1	1.422516	CTCF.p2:-24:0.423	CTCF.p2:27:1.000
chr18	8988387	8988506	reg1006489.p1	12.123	+	AB384528 TSC_hg19_v1_chr18_+_8718600	-269922	+	AK131528 NM_015210	-271078	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	-378700	+	TSC_hg19_v1_chr18_+_9102620 NM_021074	114176	+	TSC_hg19_v1_chr18_+_9102715 AK312129 BC001632 BC017487 M22538 AK291865 AB590136 BC071689 DQ892593 DQ895813 CR456928	114274	+	TSC_hg19_v1_chr18_+_9136811 NM_001083625 NM_015208 BC070234 AK024808 AY373757 BC057225 AL834204	148345	+	AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165##NM_021074|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK312129|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC001632|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC017487|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##M22538|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK291865|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC071689|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ892593|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ895813|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##CR456928|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##NM_001083625|ANKRD12|23253|ankyrin repeat domain 12##NM_015208|ANKRD12|23253|ankyrin repeat domain 12##BC070234|ANKRD12|23253|ankyrin repeat domain 12##AK024808|ANKRD12|23253|ankyrin repeat domain 12##AY373757|ANKRD12|23253|ankyrin repeat domain 12##BC057225|ANKRD12|23253|ankyrin repeat domain 12##AL834204|ANKRD12|23253|ankyrin repeat domain 12	0.0	
chr6	126277856	126278015	reg1006759.p1	12.123	+	NM_001199622 TSC_hg19_v1_chr6_+_126240392 AK094706	-37512	+	TSC_hg19_v1_chr6_+_126112105 BC036461 AK127512 AB074157 AK294558 BX537385 AL832621 AL832628 AB074156	-165827	+	TSC_hg19_v1_chr6_+_126111841 NM_001122842 NM_001199621 NM_181782	-166082	+	TSC_hg19_v1_chr6_+_126277915 NM_138571 BX647228 AK309857 BC015732 AK057688 AJ420577 AY035387 AY035388 AY486460 AY486461 DQ892201 DQ895396	50	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	29667	+	TSC_hg19_v1_chr6_+_126307685 AK308651	29728	+	NM_001199622|NCOA7|135112|nuclear receptor coactivator 7##AK094706|NCOA7|135112|nuclear receptor coactivator 7##BC036461|NCOA7|135112|nuclear receptor coactivator 7##AK127512|NCOA7|135112|nuclear receptor coactivator 7##AB074157|NCOA7|135112|nuclear receptor coactivator 7##AK294558|NCOA7|135112|nuclear receptor coactivator 7##BX537385|NCOA7|135112|nuclear receptor coactivator 7##AL832621|NCOA7|135112|nuclear receptor coactivator 7##AL832628|NCOA7|135112|nuclear receptor coactivator 7##AB074156|NCOA7|135112|nuclear receptor coactivator 7##NM_001122842|NCOA7|135112|nuclear receptor coactivator 7##NM_001199621|NCOA7|135112|nuclear receptor coactivator 7##NM_181782|NCOA7|135112|nuclear receptor coactivator 7##NM_138571|HINT3|135114|histidine triad nucleotide binding protein 3##BX647228|HINT3|135114|histidine triad nucleotide binding protein 3##AK309857|HINT3|135114|histidine triad nucleotide binding protein 3##BC015732|HINT3|135114|histidine triad nucleotide binding protein 3##AK057688|HINT3|135114|histidine triad nucleotide binding protein 3##AJ420577|HINT3|135114|histidine triad nucleotide binding protein 3##AY035387|HINT3|135114|histidine triad nucleotide binding protein 3##AY035388|HINT3|135114|histidine triad nucleotide binding protein 3##AY486460|HINT3|135114|histidine triad nucleotide binding protein 3##AY486461|HINT3|135114|histidine triad nucleotide binding protein 3##DQ892201|HINT3|135114|histidine triad nucleotide binding protein 3##DQ895396|HINT3|135114|histidine triad nucleotide binding protein 3##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)	0.996575	CTCF.p2:-16:0.997
chr15	69687073	69687178	reg1005798.p2	12.122	+	AK000197 AY424283 NM_001104554	-80384	+	TSC_hg19_v1_chr15_+_69591278 BC039234 NM_017705	-95837	+	TSC_hg19_v1_chr15_+_69452935 BC142975 AY635582 NM_015554 AK098595 BC033828 BC019011	-234227	+	TSC_hg19_v1_chr15_+_69706649 NM_004856 NM_138555 BC051826 AK308322	19520	+	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	19621	+	TSC_hg19_v1_chr15_-_69707358 AK056793	20237	-	AK000197|PAQR5|54852|progestin and adipoQ receptor family member V##AY424283|PAQR5|54852|progestin and adipoQ receptor family member V##NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V##BC039234|PAQR5|54852|progestin and adipoQ receptor family member V##NM_017705|PAQR5|54852|progestin and adipoQ receptor family member V##AY635582|GLCE|26035|glucuronic acid epimerase##NM_015554|GLCE|26035|glucuronic acid epimerase##NM_004856|KIF23|9493|kinesin family member 23##NM_138555|KIF23|9493|kinesin family member 23##BC051826|KIF23|9493|kinesin family member 23##AK308322|KIF23|9493|kinesin family member 23##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##AK056793|LOC145694|145694|uncharacterized LOC145694	0.0	
chr20	62605349	62605459	reg1006543.p1	12.122	+	TSC_hg19_v1_chr20_-_62601275 BC125129 BC125128 NM_020713	-4131	-	TSC_hg19_v1_chr20_-_62587770 BC033078 AJ605558 AK000524 AK223220 AK301602 AK222559 NM_017859	-17629	-	AK303688 NM_001193379	-22902	-	TSC_hg19_v1_chr20_-_62610996 BC067362 NM_080621	5590	-	TSC_hg19_v1_chr20_-_62611342 BC041436	5939	-	TSC_hg19_v1_chr20_+_62612424 NM_012469	7018	+	BC125129|ZNF512B|57473|zinc finger protein 512B##BC125128|ZNF512B|57473|zinc finger protein 512B##NM_020713|ZNF512B|57473|zinc finger protein 512B##BC033078|UCKL1|54963|uridine-cytidine kinase 1-like 1##AJ605558|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK000524|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK223220|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK301602|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK222559|UCKL1|54963|uridine-cytidine kinase 1-like 1##NM_017859|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK303688|UCKL1|54963|uridine-cytidine kinase 1-like 1##NM_001193379|UCKL1|54963|uridine-cytidine kinase 1-like 1##BC067362|SAMD10|140700|sterile alpha motif domain containing 10##NM_080621|SAMD10|140700|sterile alpha motif domain containing 10##BC041436|SAMD10|140700|sterile alpha motif domain containing 10##NM_012469|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)	0.999916	CTCF.p2:11:1.000
chr1	160048517	160048640	reg1007025.p1	12.121	+	BC131627 BC034036 AK312383 TSC_hg19_v1_chr1_-_160040009 U52155 NM_002241	-8580	-	AB028127 TSC_hg19_v1_chr1_-_160001781 BC019865 AK074655 BC011395 NM_145167	-46824	-	CU676470 TSC_hg19_v1_chr1_-_160001654 BC001803	-46982	-	TSC_hg19_v1_chr1_+_160051343 NM_004983 U52152 BC117516 BC117517 BC117518 BC117519	2784	+	AB590475 TSC_hg19_v1_chr1_-_160068277 AY157579 AF311906 AY044845	19719	-	TSC_hg19_v1_chr1_-_160068411 AF407274 AK055843 BC053881 NM_052868	19837	-	BC131627|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##BC034036|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##AK312383|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##U52155|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##NM_002241|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##AB028127|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC019865|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AK074655|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC011395|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##NM_145167|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC001803|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##NM_004983|KCNJ9|3765|potassium inwardly-rectifying channel, subfamily J, member 9##U52152|KCNJ9|3765|potassium inwardly-rectifying channel, subfamily J, member 9##AY157579|IGSF8|93185|immunoglobulin superfamily, member 8##AF311906|IGSF8|93185|immunoglobulin superfamily, member 8##AY044845|IGSF8|93185|immunoglobulin superfamily, member 8##AF407274|IGSF8|93185|immunoglobulin superfamily, member 8##AK055843|IGSF8|93185|immunoglobulin superfamily, member 8##BC053881|IGSF8|93185|immunoglobulin superfamily, member 8##NM_052868|IGSF8|93185|immunoglobulin superfamily, member 8	0.992365	CTCF.p2:6:0.992
chr12	77443682	77443808	reg1007367.p1	12.121	+	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-170962	-	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	-285719	+	TSC_hg19_v1_chr12_+_77157894 BC050324 AB023163	-285841	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	15544	-	NM_014903 AJ488201	781387	+	AK094616 NM_001135805	1814027	+	BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC050324|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB023163|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I	0.642667	CTCF.p2:-4:0.643
chr3	72004770	72004901	reg1003435.p1	12.121	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-170564	-	AK313656 NM_173359	-200912	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-201313	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	892713	-	BC017274 TSC_hg19_v1_chr3_-_72897575	892740	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	892757	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.990687	CTCF.p2:-19:0.991
chr5	33934944	33935048	reg1005177.p4	12.121	+	TSC_hg19_v1_chr5_-_33892294 AJ250725	-42701	-	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	-42951	-	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	-493857	+	D88437 NM_016568	1494	+	CU687878 CU678524 AF172849 BC064405 BC003597 NM_001012509 NM_016180	49737	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	73167	-	AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##D88437|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##NM_016568|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##AF172849|SLC45A2|51151|solute carrier family 45, member 2##BC064405|SLC45A2|51151|solute carrier family 45, member 2##BC003597|SLC45A2|51151|solute carrier family 45, member 2##NM_001012509|SLC45A2|51151|solute carrier family 45, member 2##NM_016180|SLC45A2|51151|solute carrier family 45, member 2##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase	0.388567	CTCF.p2:3:0.389
chr7	27235965	27236088	reg1005583.p1	12.120	+	TSC_hg19_v1_chr7_+_27225046 BC025338	-10993	+	AB464571 EU446480 TSC_hg19_v1_chr7_-_27224852 AK313921 BC040948 NM_005523 BC033706	-11185	-	TSC_hg19_v1_chr7_+_27224163 DQ655923	-11802	+	BC075791 NM_000522 TSC_hg19_v1_chr7_-_27239748	3718	-	AK299188 NM_001989	46137	+	TSC_hg19_v1_chr7_-_27702469 AF529362 DQ894677 AK316605 BC020167 AB050000 BC032324	466402	-	BC025338|HOXA11-AS1|221883|HOXA11 antisense RNA 1 (non-protein coding)##EU446480|HOXA11|3207|homeobox A11##AK313921|HOXA11|3207|homeobox A11##BC040948|HOXA11|3207|homeobox A11##NM_005523|HOXA11|3207|homeobox A11##BC033706|HOXA11|3207|homeobox A11##BC075791|HOXA13|3209|homeobox A13##NM_000522|HOXA13|3209|homeobox A13##AK299188|EVX1|2128|even-skipped homeobox 1##NM_001989|EVX1|2128|even-skipped homeobox 1##AF529362|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##DQ894677|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AK316605|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##BC020167|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AB050000|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##BC032324|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase	0.234702	CTCF.p2:-32:0.235
chr19	1672080	1672226	reg1001769.p2	12.117	+	M31222 NM_003200 TSC_hg19_v1_chr19_-_1652346	-19814	-	AB385055 BC110579 BC110580 M31523 NM_001136139	-21888	-	TSC_hg19_v1_chr19_-_1605464 NM_006830	-66680	-	NM_001080488 TSC_hg19_v1_chr19_+_1753823	81599	+	TSC_hg19_v1_chr19_+_1776120 AK074606	104034	+	AY302538 NM_001178002 TSC_hg19_v1_chr19_-_1812276 BC035162 NM_138813 AK125225 AK125969	140084	-	M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##BC110580|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##M31523|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_001136139|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_006830|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##NM_001080488|ONECUT3|390874|one cut homeobox 3##AY302538|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001178002|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##BC035162|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_138813|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125225|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125969|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3	0.999967	CTCF.p2:-11:1.000
chr3	51536185	51536305	reg1006311.p2	12.117	+	TSC_hg19_v1_chr3_-_51534015 AB018343 BC110371 NM_001171904 NM_014703	-2239	-	BC022792 TSC_hg19_v1_chr3_-_51533986	-2296	-	TSC_hg19_v1_chr3_+_51428730 BC121184 BC139836	-107495	+	AK122683 NM_015106	39350	+	NM_001129884 NM_001243727 NM_015926 TSC_hg19_v1_chr3_+_51705247 AK023997 AK222938 AK222949 BC008742 NM_001243725 NM_001243726 AY358972 BC001592	169021	+	NM_000839 NM_001130063 AK315816 AK289984 AK313056 BC041447	204847	+	AB018343|VPRBP|9730|Vpr (HIV-1) binding protein##BC110371|VPRBP|9730|Vpr (HIV-1) binding protein##NM_001171904|VPRBP|9730|Vpr (HIV-1) binding protein##NM_014703|VPRBP|9730|Vpr (HIV-1) binding protein##BC022792|VPRBP|9730|Vpr (HIV-1) binding protein##BC121184|RBM15B|29890|RNA binding motif protein 15B##BC139836|RBM15B|29890|RNA binding motif protein 15B##AK122683|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)##NM_015106|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)##NM_001129884|TEX264|51368|testis expressed 264##NM_001243727|TEX264|51368|testis expressed 264##NM_015926|TEX264|51368|testis expressed 264##AK023997|TEX264|51368|testis expressed 264##AK222938|TEX264|51368|testis expressed 264##AK222949|TEX264|51368|testis expressed 264##BC008742|TEX264|51368|testis expressed 264##NM_001243725|TEX264|51368|testis expressed 264##NM_001243726|TEX264|51368|testis expressed 264##AY358972|TEX264|51368|testis expressed 264##BC001592|TEX264|51368|testis expressed 264##NM_000839|GRM2|2912|glutamate receptor, metabotropic 2##NM_001130063|GRM2|2912|glutamate receptor, metabotropic 2##AK315816|GRM2|2912|glutamate receptor, metabotropic 2##AK289984|GRM2|2912|glutamate receptor, metabotropic 2##AK313056|GRM2|2912|glutamate receptor, metabotropic 2##BC041447|GRM2|2912|glutamate receptor, metabotropic 2	0.999818	CTCF.p2:-4:1.000
chr1	114521505	114521632	reg1005157.p1	12.116	+	BC036057 NM_181358	-25070	+	BC028408 NM_198269	-27802	+	AB089957 TSC_hg19_v1_chr1_+_114472488	-49100	+	AY358954 NM_020190 AY464015 AK092766 AX747716 AK075369 TSC_hg19_v1_chr1_+_114522099 AK297902 AF201945 AK223221 BC009920 AK222471 AK075479 AK075353 AK075544 AB590196 DQ892781 DQ896028 CU679529	515	+	AK056448 NM_205848	173493	-	BC044948 NM_001253772	174903	-	BC036057|HIPK1|204851|homeodomain interacting protein kinase 1##NM_181358|HIPK1|204851|homeodomain interacting protein kinase 1##BC028408|HIPK1|204851|homeodomain interacting protein kinase 1##NM_198269|HIPK1|204851|homeodomain interacting protein kinase 1##AB089957|HIPK1|204851|homeodomain interacting protein kinase 1##AY358954|OLFML3|56944|olfactomedin-like 3##NM_020190|OLFML3|56944|olfactomedin-like 3##AY464015|OLFML3|56944|olfactomedin-like 3##AK092766|OLFML3|56944|olfactomedin-like 3##AK075369|OLFML3|56944|olfactomedin-like 3##AK297902|OLFML3|56944|olfactomedin-like 3##AF201945|OLFML3|56944|olfactomedin-like 3##AK223221|OLFML3|56944|olfactomedin-like 3##BC009920|OLFML3|56944|olfactomedin-like 3##AK222471|OLFML3|56944|olfactomedin-like 3##AK075479|OLFML3|56944|olfactomedin-like 3##AK075353|OLFML3|56944|olfactomedin-like 3##AK075544|OLFML3|56944|olfactomedin-like 3##DQ892781|OLFML3|56944|olfactomedin-like 3##DQ896028|OLFML3|56944|olfactomedin-like 3##AK056448|SYT6|148281|synaptotagmin VI##NM_205848|SYT6|148281|synaptotagmin VI##BC044948|SYT6|148281|synaptotagmin VI##NM_001253772|SYT6|148281|synaptotagmin VI	0.810268	CTCF.p2:-1:0.810
chr2	49173747	49173870	reg1006925.p1	12.116	+	S57793 M63108 M73746 AK123498 NM_000233	-190964	-	AK302220 NM_001193487 NM_006872 BC025991 AK223350 AF106857 CU693090 DQ891566 DQ894756 BC064585	-328833	+	NM_001198594 BC101772 BC101774 BC143520 AF255310 BC121063 BC121064 AY026319	-366060	+	AY429104 BC096831 X68044 JN003607 BC118548 BC125270 M65085 S59900 M95489 AK292562 AK310367 NM_000145 NM_181446	207802	-	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	1401114	-	TSC_hg19_v1_chr2_-_51259258 BC046631	2085450	-	S57793|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M63108|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M73746|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK123498|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##NM_000233|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like##BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like##AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like##AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like##BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_001198594|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##BC101772|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##BC101774|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##BC143520|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##AF255310|STON1|11037|stonin 1##BC121063|STON1|11037|stonin 1##BC121064|STON1|11037|stonin 1##AY026319|STON1|11037|stonin 1##AY429104|FSHR|2492|follicle stimulating hormone receptor##BC096831|FSHR|2492|follicle stimulating hormone receptor##X68044|FSHR|2492|follicle stimulating hormone receptor##JN003607|FSHR|2492|follicle stimulating hormone receptor##BC118548|FSHR|2492|follicle stimulating hormone receptor##BC125270|FSHR|2492|follicle stimulating hormone receptor##M65085|FSHR|2492|follicle stimulating hormone receptor##S59900|FSHR|2492|follicle stimulating hormone receptor##M95489|FSHR|2492|follicle stimulating hormone receptor##AK292562|FSHR|2492|follicle stimulating hormone receptor##AK310367|FSHR|2492|follicle stimulating hormone receptor##NM_000145|FSHR|2492|follicle stimulating hormone receptor##NM_181446|FSHR|2492|follicle stimulating hormone receptor##AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##BC046631|NRXN1|9378|neurexin 1	0.920933	CTCF.p2:-9:0.921
chr1	158299710	158299845	reg1008371.p1	12.115	+	AK226024 NM_001765	-40217	+	M28825 NM_001763	-75851	+	AK225996 TSC_hg19_v1_chr1_+_158150684 AK310541 J04142 AK310749 AB590619 CU693322	-148993	+	CU686844 AB590508 AK303330 BC074747 AK310617 BC069481 BC104216 BC104217 M28826 NM_001764	1488	-	NM_001042583 NM_001042584 NM_001042585 NM_001042586 NM_001042587 NM_001185107 NM_001185108 NM_001185110 NM_001185112 NM_001185113 NM_001185114 NM_001185115 NM_030893 AK311643 AK303217 AK303233 AK303108 AK310673 BC131693 AB590971 AJ289111 AJ289112 AJ289113 AJ289114 AJ289115 AJ289116 AJ289117 AJ289118 AJ289119 AJ289120 AJ289121 AJ289122	23854	+	AB528820 NM_001004475	69478	-	AK226024|CD1C|911|CD1c molecule##NM_001765|CD1C|911|CD1c molecule##M28825|CD1A|909|CD1a molecule##NM_001763|CD1A|909|CD1a molecule##AK225996|CD1D|912|CD1d molecule##J04142|CD1D|912|CD1d molecule##AK310749|CD1D|912|CD1d molecule##AK303330|CD1B|910|CD1b molecule##BC074747|CD1B|910|CD1b molecule##AK310617|CD1B|910|CD1b molecule##BC069481|CD1B|910|CD1b molecule##BC104216|CD1B|910|CD1b molecule##BC104217|CD1B|910|CD1b molecule##M28826|CD1B|910|CD1b molecule##NM_001764|CD1B|910|CD1b molecule##NM_001042583|CD1E|913|CD1e molecule##NM_001042584|CD1E|913|CD1e molecule##NM_001042585|CD1E|913|CD1e molecule##NM_001042586|CD1E|913|CD1e molecule##NM_001042587|CD1E|913|CD1e molecule##NM_001185107|CD1E|913|CD1e molecule##NM_001185108|CD1E|913|CD1e molecule##NM_001185110|CD1E|913|CD1e molecule##NM_001185112|CD1E|913|CD1e molecule##NM_001185113|CD1E|913|CD1e molecule##NM_001185114|CD1E|913|CD1e molecule##NM_001185115|CD1E|913|CD1e molecule##NM_030893|CD1E|913|CD1e molecule##AK311643|CD1E|913|CD1e molecule##AK303217|CD1E|913|CD1e molecule##AK303108|CD1E|913|CD1e molecule##BC131693|CD1E|913|CD1e molecule##AJ289111|CD1E|913|CD1e molecule##AJ289112|CD1E|913|CD1e molecule##AJ289113|CD1E|913|CD1e molecule##AJ289114|CD1E|913|CD1e molecule##AJ289115|CD1E|913|CD1e molecule##AJ289116|CD1E|913|CD1e molecule##AJ289117|CD1E|913|CD1e molecule##AJ289118|CD1E|913|CD1e molecule##AJ289119|CD1E|913|CD1e molecule##AJ289120|CD1E|913|CD1e molecule##AJ289121|CD1E|913|CD1e molecule##AJ289122|CD1E|913|CD1e molecule##NM_001004475|OR10T2|128360|olfactory receptor, family 10, subfamily T, member 2	0.995716	CTCF.p2:9:0.996
chr20	18257506	18257633	reg1007863.p1	12.115	+	NM_020536 BC007537	-134654	+	TSC_hg19_v1_chr20_+_18118516 NM_001164811 AY358666	-139037	+	AK022284 NM_021220 BC006148	-219047	-	BC001887 NM_001083330 NM_003434 TSC_hg19_v1_chr20_+_18269170 AK295273 AK295513 AK291389 AK316386 AK294263 AK313525	11598	+	TSC_hg19_v1_chr20_-_18447678 CR749327 BC036231 BC130341 BC144153 AK295073 AK055544 AK299746 NM_001099407	190156	-	TSC_hg19_v1_chr20_+_18448037 BC012588 BC016761 NM_006466 AK314838 AK096684 AK223298 AK290892 U93869 AB464048 DQ892695 DQ896169	190520	+	NM_020536|CSRP2BP|57325|CSRP2 binding protein##BC007537|CSRP2BP|57325|CSRP2 binding protein##NM_001164811|PET117|100303755|cytochrome c oxidase assembly factor-like##AY358666|PET117|100303755|cytochrome c oxidase assembly factor-like##AK022284|OVOL2|58495|ovo-like 2 (Drosophila)##NM_021220|OVOL2|58495|ovo-like 2 (Drosophila)##BC006148|OVOL2|58495|ovo-like 2 (Drosophila)##BC001887|ZNF133|7692|zinc finger protein 133##NM_001083330|ZNF133|7692|zinc finger protein 133##NM_003434|ZNF133|7692|zinc finger protein 133##AK295273|ZNF133|7692|zinc finger protein 133##AK295513|ZNF133|7692|zinc finger protein 133##AK291389|ZNF133|7692|zinc finger protein 133##AK316386|ZNF133|7692|zinc finger protein 133##AK294263|ZNF133|7692|zinc finger protein 133##AK313525|ZNF133|7692|zinc finger protein 133##CR749327|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC036231|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC130341|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC144153|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK295073|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK055544|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK299746|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##NM_001099407|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC012588|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##BC016761|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##NM_006466|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK314838|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK096684|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK223298|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK290892|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##U93869|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##DQ892695|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##DQ896169|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa	0.978781	CTCF.p2:0:0.979
chr5	98368295	98368428	reg1008614.p1	12.115	+	BC054860 BC117134 NM_001270 AF006513	-106133	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-263320	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-1849374	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	1502712	+	AF529367 TSC_hg19_v1_chr5_+_99871306	1502909	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	1870567	-	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.7431	CTCF.p2:9:0.743
chr7	45175874	45175977	reg1006337.p2	12.115	+	TSC_hg19_v1_chr7_-_45151297 AK300489 AL833840 AK001281 AB023165 NM_004749 NM_030900 NM_199122	-24613	-	BC017235 BC014918 AK022575 AK222943 TSC_hg19_v1_chr7_-_45151294	-24642	-	NM_001146334 TSC_hg19_v1_chr7_-_45128497	-47426	-	NM_005856 TSC_hg19_v1_chr7_+_45197392 AJ001016 BC022304 BC053852 AK222469 DQ891371 CU691036 AK311871 AY265459	21471	+	TSC_hg19_v1_chr7_+_45614105 AF497515 NM_021116	438177	+	AB209496 TSC_hg19_v1_chr7_+_45614187	438274	+	AK300489|TBRG4|9238|transforming growth factor beta regulator 4##AL833840|TBRG4|9238|transforming growth factor beta regulator 4##AK001281|TBRG4|9238|transforming growth factor beta regulator 4##AB023165|TBRG4|9238|transforming growth factor beta regulator 4##NM_004749|TBRG4|9238|transforming growth factor beta regulator 4##NM_030900|TBRG4|9238|transforming growth factor beta regulator 4##NM_199122|TBRG4|9238|transforming growth factor beta regulator 4##BC017235|TBRG4|9238|transforming growth factor beta regulator 4##BC014918|TBRG4|9238|transforming growth factor beta regulator 4##AK022575|TBRG4|9238|transforming growth factor beta regulator 4##AK222943|TBRG4|9238|transforming growth factor beta regulator 4##NM_001146334|NACAD|23148|NAC alpha domain containing##NM_005856|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AJ001016|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC022304|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC053852|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK222469|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##DQ891371|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK311871|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AY265459|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AF497515|ADCY1|107|adenylate cyclase 1 (brain)##NM_021116|ADCY1|107|adenylate cyclase 1 (brain)##AB209496|ADCY1|107|adenylate cyclase 1 (brain)	0.212277	CTCF.p2:2:0.212
chr11	119404675	119404791	reg1005574.p1	12.114	+	BC037832 NM_006288	-110490	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-110824	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	-152334	-	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	194649	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	594813	-	AK299472 TSC_hg19_v1_chr11_-_120008323	603539	-	BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29	0.788381	CTCF.p2:-2:0.648
chr16	57933743	57933867	reg1008527.p1	12.114	+	TSC_hg19_v1_chr16_-_57836404 AK307846 BC001211 AK304132 NM_001130100 NM_005550	-97396	-	TSC_hg19_v1_chr16_-_57836370 AB209290	-97434	-	BC041132 AK299431 AK291737 NM_001130099	-102004	-	U58837 NM_001135639 NM_001297 U18945	71210	-	AY363222 AY363223 NM_199046 NM_199456 BC104458 BC104459	76537	+	AB037809 NM_020807	99956	-	AK307846|KIFC3|3801|kinesin family member C3##BC001211|KIFC3|3801|kinesin family member C3##AK304132|KIFC3|3801|kinesin family member C3##NM_001130100|KIFC3|3801|kinesin family member C3##NM_005550|KIFC3|3801|kinesin family member C3##AB209290|KIFC3|3801|kinesin family member C3##BC041132|KIFC3|3801|kinesin family member C3##AK299431|KIFC3|3801|kinesin family member C3##AK291737|KIFC3|3801|kinesin family member C3##NM_001130099|KIFC3|3801|kinesin family member C3##U58837|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001135639|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001297|CNGB1|1258|cyclic nucleotide gated channel beta 1##U18945|CNGB1|1258|cyclic nucleotide gated channel beta 1##AY363222|TEPP|374739|testis, prostate and placenta expressed##AY363223|TEPP|374739|testis, prostate and placenta expressed##NM_199046|TEPP|374739|testis, prostate and placenta expressed##NM_199456|TEPP|374739|testis, prostate and placenta expressed##BC104458|TEPP|374739|testis, prostate and placenta expressed##BC104459|TEPP|374739|testis, prostate and placenta expressed##AB037809|ZNF319|57567|zinc finger protein 319##NM_020807|ZNF319|57567|zinc finger protein 319	0.98304	CTCF.p2:0:0.983
chr2	37623154	37623310	reg1008246.p1	12.114	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-51419	+	BC030706 BC012820 AB015982 NM_005813	-79039	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-164386	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	275547	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	276157	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	529200	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.715492	CTCF.p2:-8:0.715
chr3	191134925	191135031	reg1006458.p1	12.114	+	AK090630 AX746546 NM_198152	-86654	-	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	-87812	+	AY398681 AY573933 BC128106 BC128107 NM_198184	-204657	+	AY858112 NM_001083308	43973	+	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	991865	-	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	1310387	-	AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50##AY398681|OSTN|344901|osteocrin##AY573933|OSTN|344901|osteocrin##BC128106|OSTN|344901|osteocrin##BC128107|OSTN|344901|osteocrin##NM_198184|OSTN|344901|osteocrin##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12	0.991945	CTCF.p2:-4:0.992
chr3	48774472	48774599	reg1008709.p1	12.114	+	TSC_hg19_v1_chr3_-_48754622 BC019694 AK291501 AY007091 BC001864 BC065533 BC004469 AK304714 AK315204 AK024045 AK290526 AL137514 BX537544 NM_001005909 NM_001005910 NM_001005911 NM_001146178 NM_001146179 NM_001190316 NM_001190317 NM_016291	-19886	-	AB384897 CU677561 BC016052 BC006255 TSC_hg19_v1_chr3_-_48723349 AF303581 BC026280 AF178432 AJ242655 AY453794 NM_016453 NM_184231	-51240	-	TSC_hg19_v1_chr3_-_48700322 AF231023 NM_001407	-74200	-	BT007225 AB464095 CU678176 TSC_hg19_v1_chr3_-_48885175	110574	-	X14968 TSC_hg19_v1_chr3_-_48885238 AK293042	110700	-	TSC_hg19_v1_chr3_-_48885271 BC002763 NM_004157	110753	-	BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2##AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2##AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2##BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2##BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2##BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2##AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2##AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2##AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2##AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2##AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2##BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2##BC016052|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC006255|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF303581|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC026280|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF178432|NCKIPSD|51517|NCK interacting protein with SH3 domain##AJ242655|NCKIPSD|51517|NCK interacting protein with SH3 domain##AY453794|NCKIPSD|51517|NCK interacting protein with SH3 domain##NM_016453|NCKIPSD|51517|NCK interacting protein with SH3 domain##NM_184231|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF231023|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)##NM_001407|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)##BT007225|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha##X14968|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha##AK293042|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha##BC002763|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha##NM_004157|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha	0.984065	CTCF.p2:5:0.984
chr10	81368656	81368784	reg1008512.p1	12.113	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	-48569	-	BC070048 NM_001099692	-96364	+	TSC_hg19_v1_chr10_-_81205381 AK308876 AK075279 BC053564 BC039249 BC028617 NM_153367	-163460	-	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	1984	+	BC022318 NM_003019	340140	-	TSC_hg19_v1_chr10_+_81838420 AK222536 AK023325 BC022252 NM_025125 CR457310	469716	+	BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##AK308876|ZCCHC24|219654|zinc finger, CCHC domain containing 24##AK075279|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC053564|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC039249|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC028617|ZCCHC24|219654|zinc finger, CCHC domain containing 24##NM_153367|ZCCHC24|219654|zinc finger, CCHC domain containing 24##AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1##BC022318|SFTPD|6441|surfactant protein D##NM_003019|SFTPD|6441|surfactant protein D##AK222536|FAM213A|80195|family with sequence similarity 213, member A##AK023325|FAM213A|80195|family with sequence similarity 213, member A##BC022252|FAM213A|80195|family with sequence similarity 213, member A##NM_025125|FAM213A|80195|family with sequence similarity 213, member A##CR457310|FAM213A|80195|family with sequence similarity 213, member A	2.76074	CTCF.p2:1:0.998	CTCF.p2:-29:0.844	CTCF.p2:-77:0.918
chr1	178471009	178471117	reg1005937.p2	12.113	+	AF047711 NM_004841 AK290308	-160429	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-407422	+	TSC_hg19_v1_chr1_+_178063306 BC063442	-407759	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	11203	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	223310	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	369083	-	AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##BC110611|RASAL2|9462|RAS protein activator like 2##BC063442|RASAL2|9462|RAS protein activator like 2##AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1	0.931305	CTCF.p2:0:0.931
chr18	34965939	34966077	reg1008896.p1	12.113	+	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-556888	-	TSC_hg19_v1_chr18_+_34409093 AK304230 AL832625 NM_020776 BC038772 AK292288 BX648875 BC045585 AB587550 AM393103 AM393380 BC146691	-556925	+	AB073382 TSC_hg19_v1_chr18_-_34408948	-557056	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	179688	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	179991	-	TSC_hg19_v1_chr18_-_36915657 D28405	1949648	-	BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK304230|KIAA1328|57536|KIAA1328##AL832625|KIAA1328|57536|KIAA1328##NM_020776|KIAA1328|57536|KIAA1328##AK292288|KIAA1328|57536|KIAA1328##BX648875|KIAA1328|57536|KIAA1328##BC045585|KIAA1328|57536|KIAA1328##AM393103|KIAA1328|57536|KIAA1328##AM393380|KIAA1328|57536|KIAA1328##BC146691|KIAA1328|57536|KIAA1328##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4	0.997454	CTCF.p2:-11:0.997
chr22	22978811	22978942	reg1006420.p1	12.113	+	BC014074 NM_206955 NM_206956 AK304593 TSC_hg19_v1_chr22_-_22901678 BC039731 U65011 NM_006115 NM_206953 NM_206954 BC022008	-77282	-	BC053901 AK093108 NM_080740	-104272	-	AK097608 NM_080764	-115372	-	NM_199127 X98922 CU686896 BC069534	9922	+	TSC_hg19_v1_chr22_+_23010757 L29162	31884	+	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	50327	+	BC014074|PRAME|23532|preferentially expressed antigen in melanoma##NM_206955|PRAME|23532|preferentially expressed antigen in melanoma##NM_206956|PRAME|23532|preferentially expressed antigen in melanoma##AK304593|PRAME|23532|preferentially expressed antigen in melanoma##BC039731|PRAME|23532|preferentially expressed antigen in melanoma##U65011|PRAME|23532|preferentially expressed antigen in melanoma##NM_006115|PRAME|23532|preferentially expressed antigen in melanoma##NM_206953|PRAME|23532|preferentially expressed antigen in melanoma##NM_206954|PRAME|23532|preferentially expressed antigen in melanoma##BC022008|PRAME|23532|preferentially expressed antigen in melanoma##BC053901|ZNF280A|129025|zinc finger protein 280A##AK093108|ZNF280A|129025|zinc finger protein 280A##NM_080740|ZNF280A|129025|zinc finger protein 280A##AK097608|ZNF280B|140883|zinc finger protein 280B##NM_080764|ZNF280B|140883|zinc finger protein 280B##NM_199127|GGTLC2|91227|gamma-glutamyltransferase light chain 2##X98922|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC069534|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25	0.92641	CTCF.p2:-15:0.926
chr2	233893692	233893795	reg1006518.p1	12.113	+	TSC_hg19_v1_chr2_-_233877933 BC031573 NM_019850 AK025225 AK300953	-15793	-	TSC_hg19_v1_chr2_-_233877913 AK298315	-15836	-	TSC_hg19_v1_chr2_-_233792866 AK297390 NM_001114090 BC073962	-100884	-	BC069151 BC107053 NM_005383	3638	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	31316	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	31373	+	BC031573|NGEF|25791|neuronal guanine nucleotide exchange factor##NM_019850|NGEF|25791|neuronal guanine nucleotide exchange factor##AK300953|NGEF|25791|neuronal guanine nucleotide exchange factor##AK298315|NGEF|25791|neuronal guanine nucleotide exchange factor##AK297390|NGEF|25791|neuronal guanine nucleotide exchange factor##NM_001114090|NGEF|25791|neuronal guanine nucleotide exchange factor##BC073962|NGEF|25791|neuronal guanine nucleotide exchange factor##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa	0.961634	CTCF.p2:20:0.962
chr22	18760833	18760965	reg1008111.p1	12.112	+	TSC_hg19_v1_chr22_+_18632936 AK313385 AL136690 BC014896	-127997	+	TSC_hg19_v1_chr22_+_18632731 NM_017414	-128165	+	TSC_hg19_v1_chr22_+_18593574 AJ245922 CR456600 BC104845 BC074827 AK315316	-167316	+	NM_005675 AF228707 TSC_hg19_v1_chr22_+_18893832 AK315115 BC047039 CR456434 AK098780 AB528122 CU012994 CU013282	132911	+	AB209472 TSC_hg19_v1_chr22_-_18923807 BC068260 BC094736 BC036534	162832	-	BC118597 BC121809 NM_001195226 NM_016335 U79754	163115	-	AK313385|USP18|11274|ubiquitin specific peptidase 18##AL136690|USP18|11274|ubiquitin specific peptidase 18##BC014896|USP18|11274|ubiquitin specific peptidase 18##NM_017414|USP18|11274|ubiquitin specific peptidase 18##AJ245922|TUBA8|51807|tubulin, alpha 8##CR456600|TUBA8|51807|tubulin, alpha 8##BC104845|TUBA8|51807|tubulin, alpha 8##BC074827|TUBA8|51807|tubulin, alpha 8##AK315316|TUBA8|51807|tubulin, alpha 8##NM_005675|DGCR6|8214|DiGeorge syndrome critical region gene 6##AF228707|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK315115|DGCR6|8214|DiGeorge syndrome critical region gene 6##BC047039|DGCR6|8214|DiGeorge syndrome critical region gene 6##CR456434|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK098780|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU012994|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU013282|DGCR6|8214|DiGeorge syndrome critical region gene 6##AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1##BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1##BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1##BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1##BC118597|PRODH|5625|proline dehydrogenase (oxidase) 1##BC121809|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_001195226|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_016335|PRODH|5625|proline dehydrogenase (oxidase) 1##U79754|PRODH|5625|proline dehydrogenase (oxidase) 1	0.962445	CTCF.p2:10:0.962
chr3	114102766	114102877	reg1006441.p1	12.112	+	AF139460 NM_001164342	-333	-	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	-89968	+	NM_007136 X65233	-146397	-	BC029041 NM_001164347	240231	-	AK315307 NM_001164346 TSC_hg19_v1_chr3_-_114343793	240973	-	AK225788 NM_001164344 NM_001164345	375299	-	AF139460|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164342|ZBTB20|26137|zinc finger and BTB domain containing 20##EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20##AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20	0.326668	CTCF.p2:-10:0.327
chr4	26070982	26071100	reg1005862.p2	12.112	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-155177	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-206487	-	NM_001177999 AK314514	-412951	+	L07875 BC020780 NM_005349 NM_203283	250278	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	251268	+	TSC_hg19_v1_chr4_+_26322635 AK302230	251595	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.549526	CTCF.p2:-13:0.550
chr4	141531285	141531413	reg1008426.p1	12.111	+	U28480 BC069556 BC096736 BC098168 BC098258 BC098352 NM_021833	-41429	-	TSC_hg19_v1_chr4_+_141445351 BX648843 BC015168 AK093087	-85994	+	NM_153702 TSC_hg19_v1_chr4_+_141445321 AK312800 BX648349	-86033	+	NM_015130 TSC_hg19_v1_chr4_-_141677529	146150	-	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	523182	-	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	610706	+	U28480|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC069556|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC096736|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098168|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098258|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098352|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##NM_021833|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BX648843|ELMOD2|255520|ELMO/CED-12 domain containing 2##BC015168|ELMOD2|255520|ELMO/CED-12 domain containing 2##AK093087|ELMOD2|255520|ELMO/CED-12 domain containing 2##NM_153702|ELMOD2|255520|ELMO/CED-12 domain containing 2##AK312800|ELMOD2|255520|ELMO/CED-12 domain containing 2##BX648349|ELMOD2|255520|ELMO/CED-12 domain containing 2##NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)##AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330	0.648762	CTCF.p2:21:0.649
chr2	198716361	198716469	reg1006562.p1	12.110	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	-47045	+	NM_197970 AK302817	-65429	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-66375	-	TSC_hg19_v1_chr2_-_200213802 AK025127	1497435	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	1604387	-	TSC_hg19_v1_chr2_-_200322238 AJ438951	1605835	-	AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2##AJ438951|SATB2|23314|SATB homeobox 2	0.087247	
chr7	22822365	22822501	reg1008399.p1	12.110	+	TSC_hg19_v1_chr7_+_22767104 X04403	-55315	+	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	-55610	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	-282586	-	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	40010	-	AB030241 AK056319 AK297399 TSC_hg19_v1_chr7_-_23053708 AL833296	231262	-	TSC_hg19_v1_chr7_-_23053750 BC018710 NM_032581	231317	-	X04403|IL6|3569|interleukin 6 (interferon, beta 2)##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AB030241|FAM126A|84668|family with sequence similarity 126, member A##AK056319|FAM126A|84668|family with sequence similarity 126, member A##AK297399|FAM126A|84668|family with sequence similarity 126, member A##AL833296|FAM126A|84668|family with sequence similarity 126, member A##BC018710|FAM126A|84668|family with sequence similarity 126, member A##NM_032581|FAM126A|84668|family with sequence similarity 126, member A	0.599875	CTCF.p2:-1:0.600
chr11	1903797	1903920	reg1006744.p1	12.108	+	NM_001013254 NM_001013255	-11733	+	NM_001013253	-13956	+	AK092071 AX747343 NM_001242932	-17464	+	NM_001042780 NM_001042781 NM_001042782 NM_006757 BC062430 TSC_hg19_v1_chr11_+_1940935 BX640689 BC050446 AK056968	37029	+	TSC_hg19_v1_chr11_+_1968573 NM_021134 U26596 Z49254 AK313805 AK128774	64683	+	BC027710 TSC_hg19_v1_chr11_+_1968589	64731	+	NM_001013254|LSP1|4046|lymphocyte-specific protein 1##NM_001013255|LSP1|4046|lymphocyte-specific protein 1##NM_001013253|LSP1|4046|lymphocyte-specific protein 1##AK092071|LSP1|4046|lymphocyte-specific protein 1##NM_001242932|LSP1|4046|lymphocyte-specific protein 1##NM_001042780|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042781|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042782|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_006757|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC062430|TNNT3|7140|troponin T type 3 (skeletal, fast)##BX640689|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC050446|TNNT3|7140|troponin T type 3 (skeletal, fast)##AK056968|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_021134|MRPL23|6150|mitochondrial ribosomal protein L23##U26596|MRPL23|6150|mitochondrial ribosomal protein L23##Z49254|MRPL23|6150|mitochondrial ribosomal protein L23##AK313805|MRPL23|6150|mitochondrial ribosomal protein L23##AK128774|MRPL23|6150|mitochondrial ribosomal protein L23##BC027710|MRPL23|6150|mitochondrial ribosomal protein L23	0.988361	CTCF.p2:-6:0.988
chr4	100384153	100384291	reg1008540.p1	12.108	+	X76342 AK223472 BC131512 U07821 AK301657 AK310811 AK312854 NM_000673	-27665	-	AK301696 NM_001166504	-27932	-	CU688112 BC074786 BC066227 BC066228 BC067419 BC067420 BC067421 BC067422 BC074771 BC062476 M12272 X04299 TSC_hg19_v1_chr4_-_100273904 NM_000669	-110349	-	NM_032149 AK093085 AX747911 AK223345 AK314711 AL136838	47957	+	BC028373 NM_152292	100602	-	AK000332 AK313548 NM_001134665 NM_001134666	100958	-	X76342|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK223472|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##BC131512|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##U07821|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK301657|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK310811|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK312854|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_000673|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK301696|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_001166504|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##BC074786|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC066227|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC066228|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067419|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067420|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067421|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067422|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC074771|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC062476|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##M12272|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##X04299|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##NM_000669|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##NM_032149|C4orf17|84103|chromosome 4 open reading frame 17##AK093085|C4orf17|84103|chromosome 4 open reading frame 17##AK223345|C4orf17|84103|chromosome 4 open reading frame 17##AK314711|C4orf17|84103|chromosome 4 open reading frame 17##AL136838|C4orf17|84103|chromosome 4 open reading frame 17##BC028373|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##NM_152292|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##AK000332|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##AK313548|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##NM_001134665|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##NM_001134666|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2	0.994754	CTCF.p2:5:0.995
chr1	179779086	179779202	reg1007305.p1	12.107	+	AK313887 TSC_hg19_v1_chr1_+_179712524	-66628	+	TSC_hg19_v1_chr1_+_179712425 AK310711	-66720	+	AY902195 BC009382 NM_173509 TSC_hg19_v1_chr1_+_179712397	-66793	+	TSC_hg19_v1_chr1_-_179833583 AK021454	54440	-	BC065285 TSC_hg19_v1_chr1_-_179846939 AK057623 AK289793 BC024226 AF464140 BC094724 NM_001199260 NM_022347 NM_145034	67784	-	AK001780 TSC_hg19_v1_chr1_+_179851431 NM_015602	72339	+	AK313887|FAM163A|148753|family with sequence similarity 163, member A##AK310711|FAM163A|148753|family with sequence similarity 163, member A##AY902195|FAM163A|148753|family with sequence similarity 163, member A##BC009382|FAM163A|148753|family with sequence similarity 163, member A##NM_173509|FAM163A|148753|family with sequence similarity 163, member A##AK057623|TOR1AIP2|163590|torsin A interacting protein 2##AK289793|TOR1AIP2|163590|torsin A interacting protein 2##AF464140|TOR1AIP2|163590|torsin A interacting protein 2##BC094724|TOR1AIP2|163590|torsin A interacting protein 2##NM_001199260|TOR1AIP2|163590|torsin A interacting protein 2##NM_022347|TOR1AIP2|163590|torsin A interacting protein 2##NM_145034|TOR1AIP2|163590|torsin A interacting protein 2##AK001780|TOR1AIP1|26092|torsin A interacting protein 1##NM_015602|TOR1AIP1|26092|torsin A interacting protein 1	0.999616	CTCF.p2:2:1.000
chr15	63034729	63034866	reg1009215.p1	12.107	+	AF402000 NM_015059	-95288	+	TSC_hg19_v1_chr15_+_62682748 AB621808	-352079	+	NM_001007595	-577316	-	TSC_hg19_v1_chr15_+_63050761 BX648144 BX648146	15977	+	TSC_hg19_v1_chr15_+_63334949 NM_000366 NM_001018004 NM_001018005 NM_001018006 NM_001018007 NM_001018020 AK092051 AX747334 BC007433 AK057989 AK299387 AK129882 AK131384 AK309170 AL050179 M19713 DQ893259 DQ896588 CU675655 AY640414 AY640415	300105	+	M19714 TSC_hg19_v1_chr15_+_63335095	300293	+	AF402000|TLN2|83660|talin 2##NM_015059|TLN2|83660|talin 2##AB621808|TLN2|83660|talin 2##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B##BX648144|TLN2|83660|talin 2##BX648146|TLN2|83660|talin 2##NM_000366|TPM1|7168|tropomyosin 1 (alpha)##NM_001018004|TPM1|7168|tropomyosin 1 (alpha)##NM_001018005|TPM1|7168|tropomyosin 1 (alpha)##NM_001018006|TPM1|7168|tropomyosin 1 (alpha)##NM_001018007|TPM1|7168|tropomyosin 1 (alpha)##NM_001018020|TPM1|7168|tropomyosin 1 (alpha)##AK092051|TPM1|7168|tropomyosin 1 (alpha)##BC007433|TPM1|7168|tropomyosin 1 (alpha)##AK057989|TPM1|7168|tropomyosin 1 (alpha)##AK299387|TPM1|7168|tropomyosin 1 (alpha)##AK129882|TPM1|7168|tropomyosin 1 (alpha)##AK131384|TPM1|7168|tropomyosin 1 (alpha)##AK309170|TPM1|7168|tropomyosin 1 (alpha)##AL050179|TPM1|7168|tropomyosin 1 (alpha)##M19713|TPM1|7168|tropomyosin 1 (alpha)##DQ893259|TPM1|7168|tropomyosin 1 (alpha)##DQ896588|TPM1|7168|tropomyosin 1 (alpha)##AY640414|TPM1|7168|tropomyosin 1 (alpha)##AY640415|TPM1|7168|tropomyosin 1 (alpha)##M19714|TPM1|7168|tropomyosin 1 (alpha)	0.078159	
chrX	52004697	52004852	reg1005996.p2	12.107	+	NM_001242362 NM_030801 NM_177535 NM_177537 AB058762 BC001207 AK098830 AK289458 AK308365 AB040527 AB040528 AB040529 NM_001098800 AL136582 BC081566 BC063838	-76797	+	BC063838 BC081566 AL136582 AB040527 AB040528 AB040529 NM_001098800 AK098830 AK289458 AK308365 BC001207 AB058762 NM_001242362 NM_030801 NM_177535 NM_177537	-192466	-	TSC_hg19_v1_chrX_+_51636723 NM_001005333 NM_006986 AF258554 AK298574 AK308706 BC014070 AK314053 AK074092 AF217963 AF300328	-368071	+	NM_130777 BC066311 BC009232 AJ318880	107353	+	AB590383 DQ893147 DQ896442 NM_001079538	108383	+	NM_001097592 NM_001097594 NM_001097597 NM_001097604 NM_020411 AF251237 NM_001097593 NM_001097596 NM_001097598 NM_001097605 NM_133430 AJ290447 AJ318879 AJ318878	234139	+	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B##NM_030801|MAGED4B|81557|melanoma antigen family D, 4B##NM_177535|MAGED4B|81557|melanoma antigen family D, 4B##NM_177537|MAGED4B|81557|melanoma antigen family D, 4B##AB058762|MAGED4B|81557|melanoma antigen family D, 4B##BC001207|MAGED4B|81557|melanoma antigen family D, 4B##AK098830|MAGED4B|81557|melanoma antigen family D, 4B##AK289458|MAGED4B|81557|melanoma antigen family D, 4B##AK308365|MAGED4B|81557|melanoma antigen family D, 4B##AB040527|MAGED4B|81557|melanoma antigen family D, 4B##AB040528|MAGED4B|81557|melanoma antigen family D, 4B##AB040529|MAGED4B|81557|melanoma antigen family D, 4B##NM_001098800|MAGED4|728239|melanoma antigen family D, 4##AL136582|MAGED4B|81557|melanoma antigen family D, 4B##BC081566|MAGED4B|81557|melanoma antigen family D, 4B##BC063838|MAGED4B|81557|melanoma antigen family D, 4B##BC063838|MAGED4B|81557|melanoma antigen family D, 4B##BC081566|MAGED4B|81557|melanoma antigen family D, 4B##AL136582|MAGED4B|81557|melanoma antigen family D, 4B##AB040527|MAGED4B|81557|melanoma antigen family D, 4B##AB040528|MAGED4B|81557|melanoma antigen family D, 4B##AB040529|MAGED4B|81557|melanoma antigen family D, 4B##NM_001098800|MAGED4|728239|melanoma antigen family D, 4##AK098830|MAGED4B|81557|melanoma antigen family D, 4B##AK289458|MAGED4B|81557|melanoma antigen family D, 4B##AK308365|MAGED4B|81557|melanoma antigen family D, 4B##BC001207|MAGED4B|81557|melanoma antigen family D, 4B##AB058762|MAGED4B|81557|melanoma antigen family D, 4B##NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B##NM_030801|MAGED4B|81557|melanoma antigen family D, 4B##NM_177535|MAGED4B|81557|melanoma antigen family D, 4B##NM_177537|MAGED4B|81557|melanoma antigen family D, 4B##NM_001005333|MAGED1|9500|melanoma antigen family D, 1##NM_006986|MAGED1|9500|melanoma antigen family D, 1##AF258554|MAGED1|9500|melanoma antigen family D, 1##AK298574|MAGED1|9500|melanoma antigen family D, 1##AK308706|MAGED1|9500|melanoma antigen family D, 1##BC014070|MAGED1|9500|melanoma antigen family D, 1##AK314053|MAGED1|9500|melanoma antigen family D, 1##AK074092|MAGED1|9500|melanoma antigen family D, 1##AF217963|MAGED1|9500|melanoma antigen family D, 1##AF300328|MAGED1|9500|melanoma antigen family D, 1##NM_130777|XAGE2|9502|X antigen family, member 2##BC066311|XAGE2|9502|X antigen family, member 2##BC009232|XAGE2|9502|X antigen family, member 2##AJ318880|XAGE2|9502|X antigen family, member 2##DQ893147|XAGE2|9502|X antigen family, member 2##DQ896442|XAGE2|9502|X antigen family, member 2##NM_001079538|XAGE2B|728242|X antigen family, member 2B##NM_001097592|XAGE1A|653219|X antigen family, member 1A##NM_001097594|XAGE1B|653220|X antigen family, member 1B##NM_001097597|XAGE1C|653048|X antigen family, member 1C##NM_001097604|XAGE1E|653067|X antigen family, member 1E##NM_020411|XAGE1D|9503|X antigen family, member 1D##AF251237|XAGE1D|9503|X antigen family, member 1D##NM_001097593|XAGE1A|653219|X antigen family, member 1A##NM_001097596|XAGE1B|653220|X antigen family, member 1B##NM_001097598|XAGE1C|653048|X antigen family, member 1C##NM_001097605|XAGE1E|653067|X antigen family, member 1E##NM_133430|XAGE1D|9503|X antigen family, member 1D##AJ290447|XAGE1D|9503|X antigen family, member 1D##AJ318879|XAGE1D|9503|X antigen family, member 1D##AJ318878|XAGE1D|9503|X antigen family, member 1D	0.996329	CTCF.p2:4:0.996
chr17	8649381	8649507	reg1006219.p1	12.105	+	BC029224 AK057296 NM_001158261 NM_144681	-1316	-	TSC_hg19_v1_chr17_-_8534040 M69181 AB210026 BC144668 BC150634 NM_005964 U34304 AB621820	-115398	-	BC008968 TSC_hg19_v1_chr17_-_8424250	-225208	-	BC146949 BC146966 BC171861 NM_001128076	12432	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	53108	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	121540	-	BC029224|CCDC42|146849|coiled-coil domain containing 42##AK057296|CCDC42|146849|coiled-coil domain containing 42##NM_001158261|CCDC42|146849|coiled-coil domain containing 42##NM_144681|CCDC42|146849|coiled-coil domain containing 42##M69181|MYH10|4628|myosin, heavy chain 10, non-muscle##AB210026|MYH10|4628|myosin, heavy chain 10, non-muscle##BC144668|MYH10|4628|myosin, heavy chain 10, non-muscle##BC150634|MYH10|4628|myosin, heavy chain 10, non-muscle##NM_005964|MYH10|4628|myosin, heavy chain 10, non-muscle##U34304|MYH10|4628|myosin, heavy chain 10, non-muscle##BC008968|MYH10|4628|myosin, heavy chain 10, non-muscle##BC146949|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC146966|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC171861|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##NM_001128076|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6	0.999905	CTCF.p2:3:1.000
chr22	50679650	50679776	reg1006720.p1	12.105	+	CR456464 BC001099 CU013014 CU013302 TSC_hg19_v1_chr22_+_50640050	-39743	+	TSC_hg19_v1_chr22_+_50639439 AY324823 NM_031454 BC110866 BC051758	-40275	+	TSC_hg19_v1_chr22_+_50624353 BC012445 AL449244 NM_025204 AK292050 AY203945	-55332	+	AB051456 TSC_hg19_v1_chr22_-_50682891	3133	-	TSC_hg19_v1_chr22_-_50682948 BC144488 BC144489 BC150613 AF272887	3259	-	TSC_hg19_v1_chr22_-_50683439 BC151209 NM_020461 AL832617 AK310419	3717	-	CR456464|SELO|83642|selenoprotein O##BC001099|SELO|83642|selenoprotein O##AY324823|SELO|83642|selenoprotein O##NM_031454|SELO|83642|selenoprotein O##BC110866|SELO|83642|selenoprotein O##BC051758|SELO|83642|selenoprotein O##BC012445|TRABD|80305|TraB domain containing##AL449244|TRABD|80305|TraB domain containing##NM_025204|TRABD|80305|TraB domain containing##AK292050|TRABD|80305|TraB domain containing##AY203945|TRABD|80305|TraB domain containing##AB051456|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC144488|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC144489|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC150613|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AF272887|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC151209|TUBGCP6|85378|tubulin, gamma complex associated protein 6##NM_020461|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AL832617|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AK310419|TUBGCP6|85378|tubulin, gamma complex associated protein 6	0.694153	CTCF.p2:-2:0.694
chr3	123798319	123798435	reg1008302.p1	12.103	+	AF303889 NM_017578	-88179	-	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	-118122	-	TSC_hg19_v1_chr3_-_123680077 AK123060 AK307847 AK294979 BC040285	-118291	-	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	15228	+	TSC_hg19_v1_chr3_+_124103674 AK131379	305246	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	505151	+	AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14##AK123060|CCDC14|64770|coiled-coil domain containing 14##AK307847|CCDC14|64770|coiled-coil domain containing 14##AK294979|CCDC14|64770|coiled-coil domain containing 14##BC040285|CCDC14|64770|coiled-coil domain containing 14##AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AK131379|KALRN|8997|kalirin, RhoGEF kinase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase	0.999547	CTCF.p2:4:1.000
chr2	121070840	121070973	reg1007548.p1	12.101	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-60402	+	AK127675 AK304588 TSC_hg19_v1_chr2_+_121010450 M35416	-60462	+	NM_002881 TSC_hg19_v1_chr2_+_121010418	-60486	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	32891	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	483987	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	971867	-	BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK127675|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK304588|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##M35416|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##NM_002881|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1	0.782691	CTCF.p2:12:0.783
chr3	152292380	152292491	reg1006368.p1	12.101	+	AY358260 NM_001123228	-233657	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-275242	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	-305090	-	NM_002563 Z49205	260300	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	587591	+	TSC_hg19_v1_chr3_+_152880058 BC012362	587613	+	AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family	0.993231	CTCF.p2:11:0.993
chr7	16117817	16117947	reg1008685.p1	12.101	+	TSC_hg19_v1_chr7_-_15726309 AK309472 X82629 NM_005924	-391591	-	AB463880 CR536553 CU677801 L36328 TSC_hg19_v1_chr7_-_15726203 BC017021 AK313386	-391753	-	BC108676 AK131284 NM_001004320	-516276	-	NM_001101417 NM_001101426	343064	-	AB059270 CU678977 AB590718 AK315682 BC008484 AF361494 NM_015464	387500	-	NM_001195280	448622	+	AK309472|MEOX2|4223|mesenchyme homeobox 2##X82629|MEOX2|4223|mesenchyme homeobox 2##NM_005924|MEOX2|4223|mesenchyme homeobox 2##CR536553|MEOX2|4223|mesenchyme homeobox 2##L36328|MEOX2|4223|mesenchyme homeobox 2##BC017021|MEOX2|4223|mesenchyme homeobox 2##AK313386|MEOX2|4223|mesenchyme homeobox 2##BC108676|AGMO|392636|alkylglycerol monooxygenase##AK131284|AGMO|392636|alkylglycerol monooxygenase##NM_001004320|AGMO|392636|alkylglycerol monooxygenase##NM_001101417|ISPD|729920|isoprenoid synthase domain containing##NM_001101426|ISPD|729920|isoprenoid synthase domain containing##AB059270|SOSTDC1|25928|sclerostin domain containing 1##AK315682|SOSTDC1|25928|sclerostin domain containing 1##BC008484|SOSTDC1|25928|sclerostin domain containing 1##AF361494|SOSTDC1|25928|sclerostin domain containing 1##NM_015464|SOSTDC1|25928|sclerostin domain containing 1##NM_001195280|LRRC72|100506049|leucine rich repeat containing 72	0.9302	CTCF.p2:1:0.913
chr2	131090231	131090362	reg1008627.p1	12.100	+	TSC_hg19_v1_chr2_+_130986934 AK297320	-103362	+	AK131043 BC057811 NM_207312	-134274	-	TSC_hg19_v1_chr2_+_130939834 HQ258550 BC014255	-150477	+	TSC_hg19_v1_chr2_-_131099709 AK124405 BC006429 AK295922 AK054693 NM_032357	9475	-	TSC_hg19_v1_chr2_+_131100469 AK289878 AK292345 AK312808	10172	+	TSC_hg19_v1_chr2_+_131100487 BC010042 NM_033416	10190	+	AK131043|TUBA3E|112714|tubulin, alpha 3e##BC057811|TUBA3E|112714|tubulin, alpha 3e##NM_207312|TUBA3E|112714|tubulin, alpha 3e##BC014255|MZT2B|80097|mitotic spindle organizing protein 2B##AK124405|CCDC115|84317|coiled-coil domain containing 115##BC006429|CCDC115|84317|coiled-coil domain containing 115##AK295922|CCDC115|84317|coiled-coil domain containing 115##AK054693|CCDC115|84317|coiled-coil domain containing 115##NM_032357|CCDC115|84317|coiled-coil domain containing 115##AK289878|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK292345|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK312808|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC010042|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_033416|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	0.994668	CTCF.p2:11:0.995
chr6	80803864	80804015	reg1008733.p1	12.099	+	TSC_hg19_v1_chr6_+_80714390 AK315696	-89540	+	NM_001166691 NM_003318 TSC_hg19_v1_chr6_+_80714370 AX775733 BC032858 BC000633 AK292460	-89587	+	TSC_hg19_v1_chr6_-_80656870 CU691582 DQ891229 AF277094 BC038506 AY037298 AK310625 AK312511 AK055277 DQ426871 NM_022726	-146847	-	TSC_hg19_v1_chr6_+_80816367 NM_000056 NM_183050 AK304353 U50708	12388	+	TSC_hg19_v1_chr6_+_80816387 AK316545 BC034481	12444	+	TSC_hg19_v1_chr6_+_80816397 AK289977 BC040139 M55575 AB529112 BT020063 X52446	12498	+	AK315696|TTK|7272|TTK protein kinase##NM_001166691|TTK|7272|TTK protein kinase##NM_003318|TTK|7272|TTK protein kinase##AX775733|TTK|7272|TTK protein kinase##BC032858|TTK|7272|TTK protein kinase##BC000633|TTK|7272|TTK protein kinase##AK292460|TTK|7272|TTK protein kinase##DQ891229|ELOVL4|6785|ELOVL fatty acid elongase 4##AF277094|ELOVL4|6785|ELOVL fatty acid elongase 4##BC038506|ELOVL4|6785|ELOVL fatty acid elongase 4##AY037298|ELOVL4|6785|ELOVL fatty acid elongase 4##AK310625|ELOVL4|6785|ELOVL fatty acid elongase 4##AK312511|ELOVL4|6785|ELOVL fatty acid elongase 4##AK055277|ELOVL4|6785|ELOVL fatty acid elongase 4##DQ426871|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_022726|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_000056|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##NM_183050|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK304353|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##U50708|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK316545|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC034481|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK289977|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC040139|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##M55575|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BT020063|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##X52446|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide	0.375669	CTCF.p2:1:0.376
chr19	46386727	46386838	reg1005546.p2	12.098	+	BC016024 NM_004497 TSC_hg19_v1_chr19_+_46367583 AK223473 AB464526 BT006720 CU677549 L12141	-19167	+	AF049526 TSC_hg19_v1_chr19_-_46366406 Y10931 AB210010 BC030214 AK300252 BX649165 AK130602 NM_004819	-20338	-	BC057785 AB587490 AM393487 BC146683 BC136351 BC136352 BC144018 AK098837 AK223347 AL136761 NM_030785	-68264	-	AK223622 TSC_hg19_v1_chr19_-_46389398 AK315060 BC038222 NM_015649 AY278022 BC039002	2580	-	TSC_hg19_v1_chr19_-_46405872 BC044311 NM_001012643	19124	-	HQ258065 BC042883 NM_001029861 BC117484 BC117486	31257	-	BC016024|FOXA3|3171|forkhead box A3##NM_004497|FOXA3|3171|forkhead box A3##AK223473|FOXA3|3171|forkhead box A3##BT006720|FOXA3|3171|forkhead box A3##L12141|FOXA3|3171|forkhead box A3##AF049526|SYMPK|8189|symplekin##Y10931|SYMPK|8189|symplekin##AB210010|SYMPK|8189|symplekin##BC030214|SYMPK|8189|symplekin##AK300252|SYMPK|8189|symplekin##BX649165|SYMPK|8189|symplekin##AK130602|SYMPK|8189|symplekin##NM_004819|SYMPK|8189|symplekin##BC057785|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AM393487|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC146683|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC136351|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC136352|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC144018|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AK098837|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AK223347|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AL136761|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##NM_030785|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AK223622|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##AK315060|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##BC038222|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##NM_015649|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##AY278022|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##BC039002|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##BC044311|MYPOP|339344|Myb-related transcription factor, partner of profilin##NM_001012643|MYPOP|339344|Myb-related transcription factor, partner of profilin##HQ258065|NANOS2|339345|nanos homolog 2 (Drosophila)##BC042883|NANOS2|339345|nanos homolog 2 (Drosophila)##NM_001029861|NANOS2|339345|nanos homolog 2 (Drosophila)##BC117484|NANOS2|339345|nanos homolog 2 (Drosophila)##BC117486|NANOS2|339345|nanos homolog 2 (Drosophila)	0.997019	CTCF.p2:-6:0.997
chr18	59798669	59798783	reg1006876.p1	12.097	+	AK096495 NM_173557	-238423	-	AF217289 BC101047 BC101048 BC101049 NM_031891	-640952	+	AK314130 NM_005912	-1758726	-	AF109219 TSC_hg19_v1_chr18_-_59854208	55468	-	TSC_hg19_v1_chr18_-_59854227 BC028363	55495	-	TSC_hg19_v1_chr18_-_59854258 AK315134	55517	-	AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##BC028363|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##AK315134|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.998018	CTCF.p2:12:0.998
chr21	42832662	42832799	reg1008566.p1	12.097	+	NM_002462 TSC_hg19_v1_chr21_+_42798165 AK225885 AK315465 NM_001178046 M33882 BC052255	-34636	+	AK096355 NM_001144925	-40250	+	TSC_hg19_v1_chr21_+_42742025 AK298780	-90711	+	AK291813 TSC_hg19_v1_chr21_-_42880030 AK296860 NM_001135099 BC051839 AF270487 BC035623	47257	-	TSC_hg19_v1_chr21_-_42880078 AF329454 EU090249 HM245389 HM245390	47347	-	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	47353	-	NM_002462|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK225885|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK315465|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001178046|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##M33882|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##BC052255|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK096355|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001144925|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK298780|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK291813|TMPRSS2|7113|transmembrane protease, serine 2##AK296860|TMPRSS2|7113|transmembrane protease, serine 2##NM_001135099|TMPRSS2|7113|transmembrane protease, serine 2##BC051839|TMPRSS2|7113|transmembrane protease, serine 2##AF270487|TMPRSS2|7113|transmembrane protease, serine 2##BC035623|TMPRSS2|7113|transmembrane protease, serine 2##AF329454|TMPRSS2|7113|transmembrane protease, serine 2##EU090249|TMPRSS2|7113|transmembrane protease, serine 2##HM245389|TMPRSS2|7113|transmembrane protease, serine 2##HM245390|TMPRSS2|7113|transmembrane protease, serine 2##BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2	0.939188	CTCF.p2:-8:0.939
chr10	121446119	121446226	reg1005375.p1	12.096	+	TSC_hg19_v1_chr10_+_121411086 BC001445 AK291333 BC014656 DQ893416 DQ896772 CU675397 AB385565	-35036	+	TSC_hg19_v1_chr10_+_121411079 BC107786	-35097	+	TSC_hg19_v1_chr10_+_121411053 AL137582	-35119	+	TSC_hg19_v1_chr10_+_121485568 NM_001243195 NM_014937 AK307758	39366	+	TSC_hg19_v1_chr10_+_121485596 BC067820 AB023183	39442	+	TSC_hg19_v1_chr10_+_121485653 BC111493 BC052367 BC082755 AB385409	39533	+	AK291333|BAG3|9531|BCL2-associated athanogene 3##BC014656|BAG3|9531|BCL2-associated athanogene 3##DQ893416|BAG3|9531|BCL2-associated athanogene 3##DQ896772|BAG3|9531|BCL2-associated athanogene 3##BC107786|BAG3|9531|BCL2-associated athanogene 3##AL137582|BAG3|9531|BCL2-associated athanogene 3##NM_001243195|INPP5F|22876|inositol polyphosphate-5-phosphatase F##NM_014937|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK307758|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC067820|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AB023183|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC111493|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC052367|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC082755|INPP5F|22876|inositol polyphosphate-5-phosphatase F	0.963231	CTCF.p2:-5:0.963
chr12	104609457	104609584	reg1006555.p1	12.096	+	TSC_hg19_v1_chr12_-_104531875 X59710 BC007035 AK291934 BC005316 BC005317 AK311706 NM_006166	-77563	-	NM_013320 TSC_hg19_v1_chr12_+_104458317 AK313466 AK223342 BC006558 AF117210 BC033799 EU446491	-151234	+	BC022343 NM_031302 TSC_hg19_v1_chr12_-_104443943	-165591	-	TSC_hg19_v1_chr12_+_104609556 NM_001093771 AK304241 AY057105	20	+	TSC_hg19_v1_chr12_+_104659047 D28393	49528	+	TSC_hg19_v1_chr12_+_104680799 NM_003330 NM_182729 NM_182742 NM_182743 AK226071 AY344087 AK308881 AY344090 AY344091 AY344076 AY344075 AY344073 AY344074 AY344072 AY344081 AY344082 AY344097 AK293322 AK312262 AK296495 AY344088 AY344089 AY344674 AY344077 AY344092 AY344084 AY344086 AY344673 S79851 X91247 AY344085 AY344080 BC018122 AY344093 AY344669 AY344071 AY344676 AY344070 AY344675	71294	+	X59710|NFYB|4801|nuclear transcription factor Y, beta##BC007035|NFYB|4801|nuclear transcription factor Y, beta##AK291934|NFYB|4801|nuclear transcription factor Y, beta##BC005316|NFYB|4801|nuclear transcription factor Y, beta##BC005317|NFYB|4801|nuclear transcription factor Y, beta##AK311706|NFYB|4801|nuclear transcription factor Y, beta##NM_006166|NFYB|4801|nuclear transcription factor Y, beta##NM_013320|HCFC2|29915|host cell factor C2##AK313466|HCFC2|29915|host cell factor C2##AK223342|HCFC2|29915|host cell factor C2##BC006558|HCFC2|29915|host cell factor C2##AF117210|HCFC2|29915|host cell factor C2##BC033799|HCFC2|29915|host cell factor C2##EU446491|HCFC2|29915|host cell factor C2##BC022343|GLT8D2|83468|glycosyltransferase 8 domain containing 2##NM_031302|GLT8D2|83468|glycosyltransferase 8 domain containing 2##NM_001093771|TXNRD1|7296|thioredoxin reductase 1##AK304241|TXNRD1|7296|thioredoxin reductase 1##AY057105|TXNRD1|7296|thioredoxin reductase 1##D28393|RPL18A|6142|ribosomal protein L18a##NM_003330|TXNRD1|7296|thioredoxin reductase 1##NM_182729|TXNRD1|7296|thioredoxin reductase 1##NM_182742|TXNRD1|7296|thioredoxin reductase 1##NM_182743|TXNRD1|7296|thioredoxin reductase 1##AK226071|TXNRD1|7296|thioredoxin reductase 1##AY344087|TXNRD1|7296|thioredoxin reductase 1##AK308881|TXNRD1|7296|thioredoxin reductase 1##AY344074|TXNRD1|7296|thioredoxin reductase 1##AY344081|TXNRD1|7296|thioredoxin reductase 1##AK293322|TXNRD1|7296|thioredoxin reductase 1##AK312262|TXNRD1|7296|thioredoxin reductase 1##AK296495|TXNRD1|7296|thioredoxin reductase 1##AY344089|TXNRD1|7296|thioredoxin reductase 1##AY344077|TXNRD1|7296|thioredoxin reductase 1##AY344092|TXNRD1|7296|thioredoxin reductase 1##AY344084|TXNRD1|7296|thioredoxin reductase 1##AY344086|TXNRD1|7296|thioredoxin reductase 1##AY344673|TXNRD1|7296|thioredoxin reductase 1##S79851|TXNRD1|7296|thioredoxin reductase 1##X91247|TXNRD1|7296|thioredoxin reductase 1##BC018122|TXNRD1|7296|thioredoxin reductase 1##AY344093|TXNRD1|7296|thioredoxin reductase 1##AY344675|TXNRD1|7296|thioredoxin reductase 1	0.524899	CTCF.p2:-3:0.525
chr1	66424683	66424803	reg1006614.p1	12.096	+	AK289969 NM_002600 L20966	-165884	+	NM_001037341 CR749667 BC071607 BC036108	-166548	+	TSC_hg19_v1_chr1_+_65991390 U52912 U52913 U52914	-433336	+	AB209081 NM_001037340 AK290006	33660	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	373110	+	TSC_hg19_v1_chr1_+_66798096 AK294441	373352	+	AK289969|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_002600|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L20966|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037341|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##CR749667|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC071607|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC036108|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##U52912|LEPR|3953|leptin receptor##U52913|LEPR|3953|leptin receptor##U52914|LEPR|3953|leptin receptor##AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	0.979019	CTCF.p2:-26:0.979
chr22	17398427	17398552	reg1006713.p2	12.096	+	BC137521 BC137522 BC144679 AY989815 AK098608 AY534240 BC045548 NM_175878	-95920	-	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	-324920	-	NM_001005239	-948686	-	AB076978 NM_001037814	90622	-	TSC_hg19_v1_chr22_+_17565850 NM_014339	167362	+	TSC_hg19_v1_chr22_+_17565906 BC011624	167413	+	BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_001005239|OR11H1|81061|olfactory receptor, family 11, subfamily H, member 1##AB076978|GAB4|128954|GRB2-associated binding protein family, member 4##NM_001037814|GAB4|128954|GRB2-associated binding protein family, member 4##NM_014339|IL17RA|23765|interleukin 17 receptor A##BC011624|IL17RA|23765|interleukin 17 receptor A	0.986232	CTCF.p2:1:0.986
chr9	36873409	36873534	reg1008307.p1	12.096	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-300547	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-472296	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-472574	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	160945	-	TSC_hg19_v1_chr9_+_37079908 AK091718	206435	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	206537	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.999821	CTCF.p2:-5:1.000
chr2	217268866	217268971	reg1005582.p1	12.095	+	TSC_hg19_v1_chr2_-_217236666 AB037820 NM_020814	-32211	-	TSC_hg19_v1_chr2_+_216986829 AK026166	-282051	+	TSC_hg19_v1_chr2_+_216974124 J04977 M30938 AK290740 BC095442 BC019027 AB489155 CU676354 DQ892660 DQ895925	-294779	+	NM_014140 TSC_hg19_v1_chr2_+_217277188 AK023780	8280	+	TSC_hg19_v1_chr2_+_217277487 NM_001127207 AF432223 BC043341	8560	+	NM_000998 TSC_hg19_v1_chr2_+_217363566 AK289472 BC016748 BC067789 L22154 AK023419 AK291857 BC063476 L06499 BC014262 BC082239 BC047872	94635	+	AB037820|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_020814|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##J04977|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##M30938|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK290740|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC095442|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC019027|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ892660|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ895925|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##NM_014140|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AK023780|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##NM_001127207|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AF432223|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##BC043341|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##NM_000998|RPL37A|6168|ribosomal protein L37a##AK289472|RPL37A|6168|ribosomal protein L37a##BC016748|RPL37A|6168|ribosomal protein L37a##BC067789|RPL37A|6168|ribosomal protein L37a##L22154|RPL37A|6168|ribosomal protein L37a##AK023419|RPL37A|6168|ribosomal protein L37a##AK291857|RPL37A|6168|ribosomal protein L37a##BC063476|RPL37A|6168|ribosomal protein L37a##L06499|RPL37A|6168|ribosomal protein L37a##BC014262|RPL37A|6168|ribosomal protein L37a##BC082239|RPL37A|6168|ribosomal protein L37a##BC047872|RPL37A|6168|ribosomal protein L37a	0.539281	CTCF.p2:-2:0.539
chr22	41079232	41079348	reg1005904.p2	12.095	+	AK314857 AF490537 NM_005297 BC001736 BC021146 AY745811 AY747629 CR456497 AB063174 CU013094 CU013382 AB463112 AY562945 BT006725 DQ893603 DQ895065	-4069	+	TSC_hg19_v1_chr22_-_41032716 BC115039 NM_020831 AF448806 AB037859 BC064620 AJ297258	-46586	-	TSC_hg19_v1_chr22_-_41032681 AF368061	-46637	-	AB528234 CU013178 CU013466 CU675207 DQ893138 DQ896422 AK298215 AK300553 CR456577 BC012998 BX647991 AK292924 BC005957 BC024741 TSC_hg19_v1_chr22_-_41215380 BC039064 Y12860 NM_006358	136037	-	CU013186 CU013474 BC107120 BC101206 BC101207 BC101208 BC107148 BC139724 AK316155 AY513286 BC071629 BC121107 BC121108 U17714 U28918 AY826824 AY826825 TSC_hg19_v1_chr22_-_41252629 AK312399 BC052982	173299	-	TSC_hg19_v1_chr22_-_41252644 AK303530 AK130770	173350	-	AK314857|MCHR1|2847|melanin-concentrating hormone receptor 1##AF490537|MCHR1|2847|melanin-concentrating hormone receptor 1##NM_005297|MCHR1|2847|melanin-concentrating hormone receptor 1##BC001736|MCHR1|2847|melanin-concentrating hormone receptor 1##BC021146|MCHR1|2847|melanin-concentrating hormone receptor 1##AY745811|MCHR1|2847|melanin-concentrating hormone receptor 1##AY747629|MCHR1|2847|melanin-concentrating hormone receptor 1##CR456497|MCHR1|2847|melanin-concentrating hormone receptor 1##AB063174|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013094|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013382|MCHR1|2847|melanin-concentrating hormone receptor 1##AY562945|MCHR1|2847|melanin-concentrating hormone receptor 1##BT006725|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ893603|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ895065|MCHR1|2847|melanin-concentrating hormone receptor 1##BC115039|MKL1|57591|megakaryoblastic leukemia (translocation) 1##NM_020831|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF448806|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AB037859|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC064620|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AJ297258|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF368061|MKL1|57591|megakaryoblastic leukemia (translocation) 1##CU013178|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##CU013466|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##DQ893138|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##DQ896422|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##AK298215|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##AK300553|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##CR456577|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BC012998|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BX647991|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##AK292924|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BC005957|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BC024741|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BC039064|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##Y12860|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##NM_006358|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##CU013186|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##CU013474|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC101206|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC101207|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC101208|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC107148|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC139724|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AK316155|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AY513286|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC071629|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC121107|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC121108|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##U17714|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##U28918|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AY826824|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AY826825|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AK312399|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC052982|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AK303530|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AK130770|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)	0.260801	CTCF.p2:-6:0.261
chr4	57702912	57703047	reg1008314.p1	12.095	+	CR542135 DQ895533 EU176199 TSC_hg19_v1_chr4_-_57687883 AK312222 NM_021114 X57655 BC022514 GU727622	-15114	-	AF492675 NM_001145460 NM_032495 NM_139212	-155121	-	BC014225 AB059410 TSC_hg19_v1_chr4_-_57522645 AF492680 AF492681 NM_001145459 NM_139211	-180401	-	TSC_hg19_v1_chr4_+_57774035 NM_005612	71076	+	TSC_hg19_v1_chr4_+_57774090 BC038985 U13879 U22680	71184	+	BC132859 BC136491 TSC_hg19_v1_chr4_+_57774509	71458	+	CR542135|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##DQ895533|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##EU176199|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##AK312222|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##NM_021114|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##X57655|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##BC022514|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##GU727622|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##AF492675|HOPX|84525|HOP homeobox##NM_001145460|HOPX|84525|HOP homeobox##NM_032495|HOPX|84525|HOP homeobox##NM_139212|HOPX|84525|HOP homeobox##BC014225|HOPX|84525|HOP homeobox##AB059410|HOPX|84525|HOP homeobox##AF492680|HOPX|84525|HOP homeobox##AF492681|HOPX|84525|HOP homeobox##NM_001145459|HOPX|84525|HOP homeobox##NM_139211|HOPX|84525|HOP homeobox##NM_005612|REST|5978|RE1-silencing transcription factor##BC038985|REST|5978|RE1-silencing transcription factor##U13879|REST|5978|RE1-silencing transcription factor##BC132859|REST|5978|RE1-silencing transcription factor##BC136491|REST|5978|RE1-silencing transcription factor	0.999552	CTCF.p2:22:1.000
chr1	87758755	87758890	reg1005074.p2	12.094	+	TSC_hg19_v1_chr1_+_87595568 BC030523	-163273	+	AB007917 TSC_hg19_v1_chr1_+_87380462	-378365	+	TSC_hg19_v1_chr1_+_87380374 BC025384 BC025990 NM_001134492 NM_012262 AK023260 AB024568 BC108735	-378469	+	NM_006769 U24576 TSC_hg19_v1_chr1_+_87794164	35335	+	AK292578 TSC_hg19_v1_chr1_+_87794564	35737	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	35859	+	BC030523|LOC339524|339524|uncharacterized LOC339524##AB007917|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025384|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025990|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_001134492|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_012262|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AK023260|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AB024568|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC108735|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_006769|LMO4|8543|LIM domain only 4##U24576|LMO4|8543|LIM domain only 4##AK292578|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4	0.998777	CTCF.p2:-20:0.999
chr5	122335768	122335901	reg1008132.p1	12.094	+	NM_014035 BC010886 BC069012 TSC_hg19_v1_chr5_+_122181284 AF139461 AY358098 CU679837 CU686699 AY044655	-154587	+	TSC_hg19_v1_chr5_+_122110786 AY272044 AK002170 AB464236 BT009841 DQ890933 DQ894096 AF043453	-225022	+	AK023581 TSC_hg19_v1_chr5_+_122110776 BC003382 AF065482 AK222968	-225065	+	CU678110 TSC_hg19_v1_chr5_-_122372375 AK290321 BC002678	36530	-	TSC_hg19_v1_chr5_-_122372418 AK304053 NM_000943	36590	-	NM_001136239 AK297992 AF272898 AF272899	89010	+	NM_014035|SNX24|28966|sorting nexin 24##BC010886|SNX24|28966|sorting nexin 24##BC069012|SNX24|28966|sorting nexin 24##AF139461|SNX24|28966|sorting nexin 24##AY358098|SNX24|28966|sorting nexin 24##AY044655|SNX24|28966|sorting nexin 24##AY272044|SNX2|6643|sorting nexin 2##AK002170|SNX2|6643|sorting nexin 2##BT009841|SNX2|6643|sorting nexin 2##DQ890933|SNX2|6643|sorting nexin 2##DQ894096|SNX2|6643|sorting nexin 2##AF043453|SNX2|6643|sorting nexin 2##AK023581|SNX2|6643|sorting nexin 2##BC003382|SNX2|6643|sorting nexin 2##AF065482|SNX2|6643|sorting nexin 2##AK222968|SNX2|6643|sorting nexin 2##AK290321|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##BC002678|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##AK304053|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##NM_000943|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6	0.0	
chr12	58739953	58740092	reg1009080.p1	12.092	+	BC012776 NM_033276 BC115381 BC115382 TSC_hg19_v1_chr12_+_58335454	-404562	+	TSC_hg19_v1_chr12_+_58335326 BC033881 AF078164	-404686	+	NM_005730	-499276	-	AK301162 AY358295 NM_001136051	573293	-	AY505340 BC126169 BC126171 BC143960 AY358288 NM_153377 TSC_hg19_v1_chr12_-_59314272	574155	-	AK292857 TSC_hg19_v1_chr12_-_59314301	574280	-	BC012776|XRCC6BP1|91419|XRCC6 binding protein 1##NM_033276|XRCC6BP1|91419|XRCC6 binding protein 1##BC115381|XRCC6BP1|91419|XRCC6 binding protein 1##BC115382|XRCC6BP1|91419|XRCC6 binding protein 1##BC033881|XRCC6BP1|91419|XRCC6 binding protein 1##AF078164|XRCC6BP1|91419|XRCC6 binding protein 1##NM_005730|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	0.961947	CTCF.p2:-5:0.962
chr17	47109624	47109753	reg1006161.p1	12.092	+	TSC_hg19_v1_chr17_+_47074830 NM_001160423 NM_006546 AF198254 AK313229	-34858	+	BC096146 BC096147 BC096148 BC096149 BC069100 BC069663 BC069686 BC069746 M18185 NM_004123	-63735	-	AB464229 CU679209 CU691602 TSC_hg19_v1_chr17_-_47022173 AF156102 BC008976 NM_007241 BC038830	-87552	-	AK302876 NM_001159388	100133	+	TSC_hg19_v1_chr17_+_47210130 NM_001159387 AJ517771	100412	+	AF510036 AJ517770 NM_153446 BC113675 BC113677 HQ258321 HQ258467	100669	+	NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##BC096146|GIP|2695|gastric inhibitory polypeptide##BC096147|GIP|2695|gastric inhibitory polypeptide##BC096148|GIP|2695|gastric inhibitory polypeptide##BC096149|GIP|2695|gastric inhibitory polypeptide##BC069100|GIP|2695|gastric inhibitory polypeptide##BC069663|GIP|2695|gastric inhibitory polypeptide##BC069686|GIP|2695|gastric inhibitory polypeptide##BC069746|GIP|2695|gastric inhibitory polypeptide##M18185|GIP|2695|gastric inhibitory polypeptide##NM_004123|GIP|2695|gastric inhibitory polypeptide##AF156102|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##BC008976|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##NM_007241|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##BC038830|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##AK302876|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159388|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159387|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517771|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AF510036|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517770|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_153446|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113675|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113677|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258321|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258467|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2	0.990496	CTCF.p2:17:0.990
chr7	23312780	23312932	reg1004859.p1	12.092	+	AF322909 TSC_hg19_v1_chr7_+_23286426 BC025297 BC011595 CU679974 CU689536 AB528457 DQ892084 DQ895277 BT007074	-26408	+	TSC_hg19_v1_chr7_+_23286407 AJ505015	-26451	+	TSC_hg19_v1_chr7_+_23286393 AK292078 AK296779 AK297031 AK297803 AY359124 BC032783	-26462	+	TSC_hg19_v1_chr7_+_23338957 BC012331 NM_138446 AK127742 AK316559	26109	+	TSC_hg19_v1_chr7_-_23509637 AB529064 CU688032	196823	-	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	197142	-	AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb##BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb##BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb##BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb##AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb##AK292078|GPNMB|10457|glycoprotein (transmembrane) nmb##AK296779|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297031|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297803|GPNMB|10457|glycoprotein (transmembrane) nmb##AY359124|GPNMB|10457|glycoprotein (transmembrane) nmb##BC032783|GPNMB|10457|glycoprotein (transmembrane) nmb##BC012331|C7orf30|115416|chromosome 7 open reading frame 30##NM_138446|C7orf30|115416|chromosome 7 open reading frame 30##AK127742|C7orf30|115416|chromosome 7 open reading frame 30##AK316559|C7orf30|115416|chromosome 7 open reading frame 30##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	0.185198	
chr11	67481498	67481607	reg1006236.p1	12.090	+	TSC_hg19_v1_chr11_-_67450557 AB055770	-31006	-	BC007685 NM_001031615	-32868	-	TSC_hg19_v1_chr11_-_67442086 AK309277 NM_000695 AK092464	-39421	-	TSC_hg19_v1_chr11_-_67572800 BC063712 BC110365	91200	-	TSC_hg19_v1_chr11_-_67771527 BC101568 BC105104 BC025669 AJ422142 AJ271326 BC092472 BC033623 NM_030930	290015	-	TSC_hg19_v1_chr11_+_67776039 EF411198 NM_001161473	294479	+	AB055770|RPL37|6167|ribosomal protein L37##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC063712|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC110365|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC101568|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC105104|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC025669|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ422142|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ271326|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC092472|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC033623|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##NM_030930|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##EF411198|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001161473|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1	0.996917	CTCF.p2:14:0.997
chr12	38532642	38532766	reg1005617.p1	12.089	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-4357231	+	TSC_hg19_v1_chr12_+_34175402 BC022336	-4357318	+	AJ312278 NM_032834	-4357489	+	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	177921	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	766679	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	1304295	-	BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC022336|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AJ312278|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_032834|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A	0.967616	CTCF.p2:-9:0.968
chr20	39763974	39764106	reg1006689.p2	12.089	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	-106376	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	-106546	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-446163	-	TSC_hg19_v1_chr20_+_39765861 AB210028	1822	+	TSC_hg19_v1_chr20_+_39766146 NM_002660 NM_182811 BC136466 BC144136 M34667	2148	+	TSC_hg19_v1_chr20_-_39766625 BC035080	2568	-	BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##AB210028|PLCG1|5335|phospholipase C, gamma 1##NM_002660|PLCG1|5335|phospholipase C, gamma 1##NM_182811|PLCG1|5335|phospholipase C, gamma 1##BC136466|PLCG1|5335|phospholipase C, gamma 1##BC144136|PLCG1|5335|phospholipase C, gamma 1##M34667|PLCG1|5335|phospholipase C, gamma 1	0.999352	CTCF.p2:-3:0.999
chr10	6130752	6130875	reg1006089.p1	12.088	+	AB528862 AK223313 K03122 X01057 AK313847 NM_000417	-26591	-	AF035279 BC107777 BC065506 NM_001243539	-110799	-	CR542023 HQ401283 AB590464 BC121140 AK304211 BC074726 BC121141 U31628 NM_002189 NM_172200	-111300	-	TSC_hg19_v1_chr10_+_6130954 NM_032905	136	+	TSC_hg19_v1_chr10_+_6131024 AF542550 AK314952	186	+	TSC_hg19_v1_chr10_+_6131035 BC007871 BC039322 NM_001145547	358	+	AK223313|IL2RA|3559|interleukin 2 receptor, alpha##K03122|IL2RA|3559|interleukin 2 receptor, alpha##X01057|IL2RA|3559|interleukin 2 receptor, alpha##AK313847|IL2RA|3559|interleukin 2 receptor, alpha##NM_000417|IL2RA|3559|interleukin 2 receptor, alpha##AF035279|IL15RA|3601|interleukin 15 receptor, alpha##BC107777|IL15RA|3601|interleukin 15 receptor, alpha##BC065506|IL15RA|3601|interleukin 15 receptor, alpha##NM_001243539|IL15RA|3601|interleukin 15 receptor, alpha##CR542023|IL15RA|3601|interleukin 15 receptor, alpha##HQ401283|IL15RA|3601|interleukin 15 receptor, alpha##BC121140|IL15RA|3601|interleukin 15 receptor, alpha##AK304211|IL15RA|3601|interleukin 15 receptor, alpha##BC074726|IL15RA|3601|interleukin 15 receptor, alpha##BC121141|IL15RA|3601|interleukin 15 receptor, alpha##U31628|IL15RA|3601|interleukin 15 receptor, alpha##NM_002189|IL15RA|3601|interleukin 15 receptor, alpha##NM_172200|IL15RA|3601|interleukin 15 receptor, alpha##NM_032905|RBM17|84991|RNA binding motif protein 17##AF542550|RBM17|84991|RNA binding motif protein 17##AK314952|RBM17|84991|RNA binding motif protein 17##BC007871|RBM17|84991|RNA binding motif protein 17##BC039322|RBM17|84991|RNA binding motif protein 17##NM_001145547|RBM17|84991|RNA binding motif protein 17	0.332526	
chr12	96312390	96312526	reg1008555.p1	12.088	+	TSC_hg19_v1_chr12_+_96252771 BC128452 BC128453	-59671	+	TSC_hg19_v1_chr12_+_96252729 NM_003095 BC002505 X85372 AK311752 BC063397	-59725	+	BC136798 BC136799 AF278532 NM_021229 AF119916 TSC_hg19_v1_chr12_-_96184542	-127932	-	BC030712 BC095479 BC047659 AK097408 NM_182496	23942	-	AK054617 NM_152435 TSC_hg19_v1_chr12_+_96337118 AK122802 AB075878 AK290828 BC029146	24644	+	BC096096 BC096097 BC096098 BC096099 D16626 AK303544 NM_002108 AK298736 AK297004 TSC_hg19_v1_chr12_-_96390137	77616	-	BC128452|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC128453|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##NM_003095|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC002505|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##X85372|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##AK311752|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC063397|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC136798|NTN4|59277|netrin 4##BC136799|NTN4|59277|netrin 4##AF278532|NTN4|59277|netrin 4##NM_021229|NTN4|59277|netrin 4##AF119916|NTN4|59277|netrin 4##BC095479|CCDC38|120935|coiled-coil domain containing 38##BC047659|CCDC38|120935|coiled-coil domain containing 38##AK097408|CCDC38|120935|coiled-coil domain containing 38##NM_182496|CCDC38|120935|coiled-coil domain containing 38##AK054617|AMDHD1|144193|amidohydrolase domain containing 1##NM_152435|AMDHD1|144193|amidohydrolase domain containing 1##AK122802|AMDHD1|144193|amidohydrolase domain containing 1##AB075878|AMDHD1|144193|amidohydrolase domain containing 1##AK290828|AMDHD1|144193|amidohydrolase domain containing 1##BC029146|AMDHD1|144193|amidohydrolase domain containing 1##BC096096|HAL|3034|histidine ammonia-lyase##BC096097|HAL|3034|histidine ammonia-lyase##BC096098|HAL|3034|histidine ammonia-lyase##BC096099|HAL|3034|histidine ammonia-lyase##D16626|HAL|3034|histidine ammonia-lyase##AK303544|HAL|3034|histidine ammonia-lyase##NM_002108|HAL|3034|histidine ammonia-lyase##AK298736|HAL|3034|histidine ammonia-lyase##AK297004|HAL|3034|histidine ammonia-lyase	0.018264	
chr9	101737324	101737443	reg1004647.p1	12.088	+	TSC_hg19_v1_chr9_+_101706027 AK308438 NM_001855 AK095885 L25286 D21230	-31400	+	TSC_hg19_v1_chr9_+_101569953 AB527376 AB040673 AB078146 AJ132365 NM_024642	-167393	+	CR749467 TSC_hg19_v1_chr9_-_101558801 NM_173551	-178732	-	TSC_hg19_v1_chr9_+_101867370 AK302059	129988	+	BC071181 TSC_hg19_v1_chr9_+_101867394	130010	+	TSC_hg19_v1_chr9_+_101867401 AJ619019 L11695 NM_001130916 NM_004612	130025	+	AK308438|COL15A1|1306|collagen, type XV, alpha 1##NM_001855|COL15A1|1306|collagen, type XV, alpha 1##AK095885|COL15A1|1306|collagen, type XV, alpha 1##L25286|COL15A1|1306|collagen, type XV, alpha 1##D21230|COL15A1|1306|collagen, type XV, alpha 1##AB040673|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AB078146|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AJ132365|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##NM_024642|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##CR749467|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##NM_173551|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##AK302059|TGFBR1|7046|transforming growth factor, beta receptor 1##BC071181|TGFBR1|7046|transforming growth factor, beta receptor 1##AJ619019|TGFBR1|7046|transforming growth factor, beta receptor 1##L11695|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_001130916|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_004612|TGFBR1|7046|transforming growth factor, beta receptor 1	0.0	
chr18	21283143	21283284	reg1008282.p1	12.087	+	TSC_hg19_v1_chr18_+_21269563 BC093406 NM_001127717 NM_198129 AY327115 AY327116	-13626	+	TSC_hg19_v1_chr18_+_21269416 AK096422	-13799	+	TSC_hg19_v1_chr18_-_21242592 CU688952 AK313667 AK057782 BC030622 NM_173505	-40493	-	TSC_hg19_v1_chr18_+_21452983 NM_000227 NM_001127718 X85107 X84392 AY327114 L34155	169798	+	AK091080 AX746769 NM_153211 BC121034 BC121035	289581	+	TSC_hg19_v1_chr18_+_21594449 BC016833 NM_001135993 NM_001243425	311186	+	BC093406|LAMA3|3909|laminin, alpha 3##NM_001127717|LAMA3|3909|laminin, alpha 3##NM_198129|LAMA3|3909|laminin, alpha 3##AY327115|LAMA3|3909|laminin, alpha 3##AY327116|LAMA3|3909|laminin, alpha 3##AK096422|LAMA3|3909|laminin, alpha 3##AK313667|ANKRD29|147463|ankyrin repeat domain 29##AK057782|ANKRD29|147463|ankyrin repeat domain 29##BC030622|ANKRD29|147463|ankyrin repeat domain 29##NM_173505|ANKRD29|147463|ankyrin repeat domain 29##NM_000227|LAMA3|3909|laminin, alpha 3##NM_001127718|LAMA3|3909|laminin, alpha 3##X85107|LAMA3|3909|laminin, alpha 3##X84392|LAMA3|3909|laminin, alpha 3##AY327114|LAMA3|3909|laminin, alpha 3##L34155|LAMA3|3909|laminin, alpha 3##AK091080|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_153211|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121034|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121035|TTC39C|125488|tetratricopeptide repeat domain 39C##BC016833|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001135993|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001243425|TTC39C|125488|tetratricopeptide repeat domain 39C	0.205173	CTCF.p2:16:0.205
chr2	46290186	46290321	reg1008050.p1	12.087	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-411179	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-451846	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-495125	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	234338	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	234722	+	NM_001145051	416450	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.981446	CTCF.p2:-5:0.981
chr12	110538110	110538267	reg1005968.p1	12.086	+	AK097461 NM_207435	-32689	-	TSC_hg19_v1_chr12_-_110486328 AK021447 BC041968	-51859	-	AK302535 BC032833 TSC_hg19_v1_chr12_+_110437393 CU691256 AY364251	-100745	+	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	24033	+	TSC_hg19_v1_chr12_+_110719041 NM_001681 NM_170665	180847	+	TSC_hg19_v1_chr12_+_110719528 M23114 BC035588 M23115 CU690124	181180	+	AK097461|C12orf76|400073|chromosome 12 open reading frame 76##NM_207435|C12orf76|400073|chromosome 12 open reading frame 76##AK021447|C12orf76|400073|chromosome 12 open reading frame 76##BC041968|C12orf76|400073|chromosome 12 open reading frame 76##AK302535|ANKRD13A|88455|ankyrin repeat domain 13A##BC032833|ANKRD13A|88455|ankyrin repeat domain 13A##AY364251|ANKRD13A|88455|ankyrin repeat domain 13A##NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_001681|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_170665|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23114|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC035588|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23115|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	0.999794	CTCF.p2:-12:1.000
chr19	47046040	47046178	reg1008411.p1	12.085	+	TSC_hg19_v1_chr19_-_46999149 AK124720 NM_020709	-46948	-	TSC_hg19_v1_chr19_-_46974789 BC032508 NM_001103149 NM_018215	-71304	-	AL834344 TSC_hg19_v1_chr19_-_46974751 AK290218 BC051688	-71387	-	TSC_hg19_v1_chr19_+_47104390 BC006182	58288	+	AK094504 NM_001205281	58347	-	TSC_hg19_v1_chr19_+_47104543 NM_005184	58411	+	AK124720|PNMAL2|57469|PNMA-like 2##NM_020709|PNMAL2|57469|PNMA-like 2##BC032508|PNMAL1|55228|PNMA-like 1##NM_001103149|PNMAL1|55228|PNMA-like 1##NM_018215|PNMAL1|55228|PNMA-like 1##AL834344|PNMAL1|55228|PNMA-like 1##AK290218|PNMAL1|55228|PNMA-like 1##BC051688|PNMAL1|55228|PNMA-like 1##BC006182|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##AK094504|LOC100506012|100506012|serine/threonine-protein phosphatase 5-like##NM_001205281|LOC100506012|100506012|serine/threonine-protein phosphatase 5-like##NM_005184|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)	0.999376	CTCF.p2:14:0.999
chr1	203456602	203456756	reg1002040.p1	12.084	+	U29089 BC032498 TSC_hg19_v1_chr1_+_203444965	-11719	+	NM_002725 NM_201348 TSC_hg19_v1_chr1_+_203444937	-11770	+	TSC_hg19_v1_chr1_-_203320290 NM_002023	-136391	-	AJ133790 AY077681 NM_014359 AF161702	6602	+	TSC_hg19_v1_chr1_+_203595922 NM_001001396 NM_001684	139230	+	TSC_hg19_v1_chr1_+_203595959 CR936708 CR749393	139280	+	U29089|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##BC032498|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_002725|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_201348|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_002023|FMOD|2331|fibromodulin##AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin##NM_001001396|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_001684|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR936708|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR749393|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4	0.914224	CTCF.p2:-13:0.914
chr5	130445776	130445928	reg1008320.p1	12.084	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	-1205365	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-1649799	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-2015427	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	55079	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	55138	-	TSC_hg19_v1_chr5_-_130501019 NM_005340	55191	-	BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1##NM_005340|HINT1|3094|histidine triad nucleotide binding protein 1	0.0	
chr9	82790338	82790461	reg1007647.p1	12.084	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	-602714	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	-602875	+	TSC_hg19_v1_chr9_+_82186879 NM_007005	-603513	+	BC010100 NM_005077	1513196	-	TSC_hg19_v1_chr9_-_84304463 AB209854	1514028	-	NM_001145197 AK125847 AK308327	1752972	+	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC010100|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_005077|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##AB209854|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4##AK125847|FAM75D4|389761|family with sequence similarity 75, member D4##AK308327|FAM75D4|389761|family with sequence similarity 75, member D4	0.942596	CTCF.p2:-2:0.351	CTCF.p2:-3:0.592
chr10	61625036	61625165	reg1008667.p1	12.083	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-155376	-	AK299924 NM_001143773	-502440	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-502815	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	41101	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	41224	-	AK292927 AK092527 NM_001149	275616	-	AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.015816	
chr6	2750351	2750473	reg1006360.p1	12.083	+	NM_152554	-115115	-	TSC_hg19_v1_chr6_+_2245995 AK023629	-504399	+	CR541929 CR541947 DQ892789 DQ896036 AF042377 TSC_hg19_v1_chr6_-_2245809 AK130651 AK313953 BC000117 NM_001500	-504614	-	BX647582 NM_001012418 AK096893	764	-	TSC_hg19_v1_chr6_+_2765561 AK315047	15168	+	TSC_hg19_v1_chr6_+_2765645 AB056152 NM_020135 NM_130395	15227	+	NM_152554|C6orf195|154386|chromosome 6 open reading frame 195##CR541929|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541947|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ892789|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ896036|GMDS|2762|GDP-mannose 4,6-dehydratase##AF042377|GMDS|2762|GDP-mannose 4,6-dehydratase##AK130651|GMDS|2762|GDP-mannose 4,6-dehydratase##AK313953|GMDS|2762|GDP-mannose 4,6-dehydratase##BC000117|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001500|GMDS|2762|GDP-mannose 4,6-dehydratase##BX647582|MYLK4|340156|myosin light chain kinase family, member 4##NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4##AK096893|MYLK4|340156|myosin light chain kinase family, member 4##AK315047|WRNIP1|56897|Werner helicase interacting protein 1##AB056152|WRNIP1|56897|Werner helicase interacting protein 1##NM_020135|WRNIP1|56897|Werner helicase interacting protein 1##NM_130395|WRNIP1|56897|Werner helicase interacting protein 1	0.539103	CTCF.p2:0:0.539
chr12	25589392	25589498	reg1005936.p2	12.082	+	TSC_hg19_v1_chr12_-_25403864 AK292510 NM_004985 NM_033360 BC029545 M54968	-185504	-	TSC_hg19_v1_chr12_-_25403822 BC013572	-185630	-	AK094491 TSC_hg19_v1_chr12_+_25348215 BC100276 BC071769	-241239	+	AK093323 AX748055 NM_152590 BC037957 AK310411 AK302292 NM_001145728 NM_001145729	116751	-	AK296816 NM_001145727	212042	-	TSC_hg19_v1_chr12_+_26111964 NM_001164748 NM_007211 BC030021 AB093206 AY665468 AY665469 AY665470 AY665471	522556	+	AK292510|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##NM_004985|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##NM_033360|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC029545|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##M54968|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC013572|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC100276|LYRM5|144363|LYR motif containing 5##BC071769|LYRM5|144363|LYR motif containing 5##AK093323|IFLTD1|160492|intermediate filament tail domain containing 1##NM_152590|IFLTD1|160492|intermediate filament tail domain containing 1##BC037957|IFLTD1|160492|intermediate filament tail domain containing 1##AK310411|IFLTD1|160492|intermediate filament tail domain containing 1##AK302292|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145728|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145729|IFLTD1|160492|intermediate filament tail domain containing 1##AK296816|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145727|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001164748|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_007211|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##BC030021|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AB093206|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665468|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665469|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665470|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665471|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	0.99402	CTCF.p2:0:0.994
chr3	9545037	9545168	reg1006659.p1	12.082	+	TSC_hg19_v1_chr3_+_9476522 AB384632	-68586	+	TSC_hg19_v1_chr3_+_9439556 AK092046 AX747332	-105528	+	TSC_hg19_v1_chr3_+_9439298 NM_001080517	-105741	+	BC113964 AY278320 NM_198560 TSC_hg19_v1_chr3_-_9595497	50361	-	NM_001077525 NM_001077526 NM_022485 TSC_hg19_v1_chr3_+_9691161 AK074792 AF289603 BC025952	146040	+	TSC_hg19_v1_chr3_+_9691188 AK295891 BC050626 AK298846 AL713695	146087	+	AK092046|SETD5|55209|SET domain containing 5##NM_001080517|SETD5|55209|SET domain containing 5##BC113964|LHFPL4|375323|lipoma HMGIC fusion partner-like 4##AY278320|LHFPL4|375323|lipoma HMGIC fusion partner-like 4##NM_198560|LHFPL4|375323|lipoma HMGIC fusion partner-like 4##NM_001077525|MTMR14|64419|myotubularin related protein 14##NM_001077526|MTMR14|64419|myotubularin related protein 14##NM_022485|MTMR14|64419|myotubularin related protein 14##AK074792|MTMR14|64419|myotubularin related protein 14##AF289603|MTMR14|64419|myotubularin related protein 14##BC025952|MTMR14|64419|myotubularin related protein 14##AK295891|MTMR14|64419|myotubularin related protein 14##BC050626|MTMR14|64419|myotubularin related protein 14##AK298846|MTMR14|64419|myotubularin related protein 14##AL713695|MTMR14|64419|myotubularin related protein 14	0.982463	CTCF.p2:-25:0.982
chr9	77392093	77392227	reg1009160.p1	12.082	+	NM_006914 BC051830 Y08639	-279886	+	TSC_hg19_v1_chr9_+_75766797 BC001275	-1625357	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	-1625382	+	AY333284 NM_001177311	110102	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	110574	-	AF350881 AK057748 NM_017662	110849	-	NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B##BC001275|ANXA1|301|annexin A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##AY333284|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177311|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF350881|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AK057748|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_017662|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	0.922543	CTCF.p2:9:0.923
chr19	17393579	17393706	reg1008290.p1	12.081	+	AK303628 NM_152363	-1189	+	TSC_hg19_v1_chr19_+_17378266 AK000578 BC091491 BC000788	-15348	+	TSC_hg19_v1_chr19_+_17378251 AK308590 AK299493 NM_001033549 NM_014173 AF161491 AK025970 AK301193 BC006244 AL136692 AK225047	-15437	+	BC020173 BC039087 TSC_hg19_v1_chr19_-_17414209 BC007895 AK225140 AK315366 AK021805 AK225340 AK298251 NM_024527	20540	-	BC021801 NM_023937 TSC_hg19_v1_chr19_+_17416677 AB049652 BC000071	22949	+	TSC_hg19_v1_chr19_+_17420345 NM_024050	26639	+	AK303628|ANKLE1|126549|ankyrin repeat and LEM domain containing 1##NM_152363|ANKLE1|126549|ankyrin repeat and LEM domain containing 1##AK000578|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC091491|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC000788|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK308590|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK299493|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_001033549|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_014173|BABAM1|29086|BRISC and BRCA1 A complex member 1##AF161491|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK025970|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK301193|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC006244|BABAM1|29086|BRISC and BRCA1 A complex member 1##AL136692|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK225047|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC020173|ABHD8|79575|abhydrolase domain containing 8##BC039087|ABHD8|79575|abhydrolase domain containing 8##BC007895|ABHD8|79575|abhydrolase domain containing 8##AK225140|ABHD8|79575|abhydrolase domain containing 8##AK315366|ABHD8|79575|abhydrolase domain containing 8##AK021805|ABHD8|79575|abhydrolase domain containing 8##AK225340|ABHD8|79575|abhydrolase domain containing 8##AK298251|ABHD8|79575|abhydrolase domain containing 8##NM_024527|ABHD8|79575|abhydrolase domain containing 8##BC021801|MRPL34|64981|mitochondrial ribosomal protein L34##NM_023937|MRPL34|64981|mitochondrial ribosomal protein L34##AB049652|MRPL34|64981|mitochondrial ribosomal protein L34##BC000071|MRPL34|64981|mitochondrial ribosomal protein L34##NM_024050|DDA1|79016|DET1 and DDB1 associated 1	0.993955	CTCF.p2:10:0.994
chr12	82921097	82921216	reg1007024.p2	12.080	+	NM_032230 TSC_hg19_v1_chr12_+_82752307 AK310231 AK026442 BC029120 CU688600	-168847	+	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	-168980	-	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	-768047	-	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	159544	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	159761	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	160105	+	NM_032230|C12orf26|84190|chromosome 12 open reading frame 26##AK310231|C12orf26|84190|chromosome 12 open reading frame 26##AK026442|C12orf26|84190|chromosome 12 open reading frame 26##BC029120|C12orf26|84190|chromosome 12 open reading frame 26##BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59##AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2	0.943887	CTCF.p2:-4:0.944
chr7	15055819	15055953	reg1008174.p1	12.080	+	BC105005 BC143632 BC143633 NM_004080 NM_145695	-174872	-	NM_001163148	-1024837	-	NM_001163149 X87175	-1025018	-	BC108676 AK131284 NM_001004320	545720	-	AB463880 CR536553 CU677801 L36328 TSC_hg19_v1_chr7_-_15726203 BC017021 AK313386	670243	-	TSC_hg19_v1_chr7_-_15726309 AK309472 X82629 NM_005924	670405	-	BC105005|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143632|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143633|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_004080|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_145695|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_001163148|ETV1|2115|ets variant 1##NM_001163149|ETV1|2115|ets variant 1##X87175|ETV1|2115|ets variant 1##BC108676|AGMO|392636|alkylglycerol monooxygenase##AK131284|AGMO|392636|alkylglycerol monooxygenase##NM_001004320|AGMO|392636|alkylglycerol monooxygenase##CR536553|MEOX2|4223|mesenchyme homeobox 2##L36328|MEOX2|4223|mesenchyme homeobox 2##BC017021|MEOX2|4223|mesenchyme homeobox 2##AK313386|MEOX2|4223|mesenchyme homeobox 2##AK309472|MEOX2|4223|mesenchyme homeobox 2##X82629|MEOX2|4223|mesenchyme homeobox 2##NM_005924|MEOX2|4223|mesenchyme homeobox 2	0.516689	CTCF.p2:13:0.517
chr2	42740520	42740639	reg1008699.p1	12.079	+	TSC_hg19_v1_chr2_+_42721701 AK127245	-18877	+	TSC_hg19_v1_chr2_-_42721118 AF454547 AF454548 BC071558 AF348982 NM_133329 NM_172344	-19376	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	-20021	-	TSC_hg19_v1_chr2_+_42795781 BC053631 NM_020744 BC004227	55142	+	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	55318	+	AY158687 AB528920 AB083055 BC063549 NM_148962	250721	-	AK127245|MTA3|57504|metastasis associated 1 family, member 3##AF454547|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF454548|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##BC071558|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF348982|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##NM_133329|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##NM_172344|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##BC053631|MTA3|57504|metastasis associated 1 family, member 3##NM_020744|MTA3|57504|metastasis associated 1 family, member 3##BC004227|MTA3|57504|metastasis associated 1 family, member 3##AK027304|MTA3|57504|metastasis associated 1 family, member 3##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1	0.442557	CTCF.p2:-11:0.443
chr16	69788861	69788979	reg1006593.p1	12.078	+	AF190161 TSC_hg19_v1_chr16_-_69788828 BC064630 CU687926 AK314307 AK001028 AB026125 NM_014062 AY487344	-97	-	AK223050 BC000906 BC007659 AK312368 TSC_hg19_v1_chr16_-_69760464 AK297125 AK297979 AK307533 BC107739 AK309513 NM_000903 NM_001025433 NM_001025434	-28432	-	TSC_hg19_v1_chr16_-_69760367 AK298896 J03934	-28541	-	TSC_hg19_v1_chr16_+_69796208 AK312792	7268	+	TSC_hg19_v1_chr16_+_69796265 BC064531 AJ001982 NM_007014 NM_199423 U96114	7336	+	AK126332 NM_199424 TSC_hg19_v1_chr16_+_69958904	169982	+	AF190161|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##BC064630|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AK314307|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AK001028|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AB026125|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##NM_014062|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AY487344|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AK223050|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##BC000906|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##BC007659|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK312368|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK297125|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK297979|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK307533|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##BC107739|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK309513|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##NM_000903|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##NM_001025433|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##NM_001025434|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK298896|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##J03934|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK312792|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##BC064531|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AJ001982|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_007014|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_199423|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##U96114|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AK126332|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_199424|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2	0.667405	CTCF.p2:5:0.667
chr19	41650444	41650559	reg1007103.p2	12.078	+	AK296884 AK298082 AK316498 J02906 NM_000774 BC109057 BC109056	-30154	+	NM_000766 AB527127 AF209774 AY513604 AY513605 AY513606 AY513607 AY513608 AY513609	-56130	+	TSC_hg19_v1_chr19_+_41515553 X06399	-134963	+	TSC_hg19_v1_chr19_+_41699123 AK027605 NM_030622 AY358603	48603	+	TSC_hg19_v1_chr19_+_41699143 AK296087 BC033691 AF335278 CU689700 DQ893363 DQ896681	48662	+	TSC_hg19_v1_chr19_+_41725118 NM_001699 NM_021913	74610	+	AK298082|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##AK316498|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##J02906|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##NM_000774|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##BC109057|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##BC109056|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##NM_000766|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AF209774|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513604|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513605|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513606|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513607|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513608|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513609|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##X06399|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##AK027605|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##NM_030622|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AY358603|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AK296087|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##BC033691|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AF335278|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##DQ893363|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##DQ896681|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##NM_001699|AXL|558|AXL receptor tyrosine kinase##NM_021913|AXL|558|AXL receptor tyrosine kinase	0.999699	CTCF.p2:8:1.000
chr4	186518869	186518971	reg1004995.p1	12.078	+	AK129863 BT007341 AB528880 CU674500 TSC_hg19_v1_chr4_-_186456662 AK222966 AF002280 AF002282 BC027870 AF039018 BC001017 AK313253 NM_001114107 NM_014476	-62275	-	BC038515 AK302815 AL833337 TSC_hg19_v1_chr4_-_186392907 AB080722 BC028419 BX641119 AK097605 NM_001145411 NM_152775	-126036	-	BC127739 BC141968 BC150574 NM_001114357	-168377	+	AK304653 TSC_hg19_v1_chr4_-_186577879 AK296461	58958	-	AK056758 NM_001145674 NM_001145675	59202	-	AK225812 NM_001145673	178145	-	AK129863|PDLIM3|27295|PDZ and LIM domain 3##BT007341|PDLIM3|27295|PDZ and LIM domain 3##AK222966|PDLIM3|27295|PDZ and LIM domain 3##AF002280|PDLIM3|27295|PDZ and LIM domain 3##AF002282|PDLIM3|27295|PDZ and LIM domain 3##BC027870|PDLIM3|27295|PDZ and LIM domain 3##AF039018|PDLIM3|27295|PDZ and LIM domain 3##BC001017|PDLIM3|27295|PDZ and LIM domain 3##AK313253|PDLIM3|27295|PDZ and LIM domain 3##NM_001114107|PDLIM3|27295|PDZ and LIM domain 3##NM_014476|PDLIM3|27295|PDZ and LIM domain 3##BC038515|CCDC110|256309|coiled-coil domain containing 110##AK302815|CCDC110|256309|coiled-coil domain containing 110##AL833337|CCDC110|256309|coiled-coil domain containing 110##AB080722|CCDC110|256309|coiled-coil domain containing 110##BC028419|CCDC110|256309|coiled-coil domain containing 110##BX641119|CCDC110|256309|coiled-coil domain containing 110##AK097605|CCDC110|256309|coiled-coil domain containing 110##NM_001145411|CCDC110|256309|coiled-coil domain containing 110##NM_152775|CCDC110|256309|coiled-coil domain containing 110##BC127739|C4orf47|441054|chromosome 4 open reading frame 47##BC141968|C4orf47|441054|chromosome 4 open reading frame 47##BC150574|C4orf47|441054|chromosome 4 open reading frame 47##NM_001114357|C4orf47|441054|chromosome 4 open reading frame 47##AK304653|SORBS2|8470|sorbin and SH3 domain containing 2##AK296461|SORBS2|8470|sorbin and SH3 domain containing 2##AK056758|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145674|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145675|SORBS2|8470|sorbin and SH3 domain containing 2##AK225812|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145673|SORBS2|8470|sorbin and SH3 domain containing 2	0.995945	CTCF.p2:15:0.996
chr12	106618008	106618139	reg1007879.p1	12.077	+	AB011109 BC152462 NM_014840	-84263	-	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	-85391	-	AJ311378 TSC_hg19_v1_chr12_+_105724640	-893434	+	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	23774	-	TSC_hg19_v1_chr12_+_106696595 BC033617 NM_152772 BC017872 AF306671 AF306858 AK314055	78499	+	NM_018082 TSC_hg19_v1_chr12_+_106751498 BX537447	133397	+	AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AJ311378|C12orf75|387882|chromosome 12 open reading frame 75##BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4##BC033617|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_152772|TCP11L2|255394|t-complex 11 (mouse)-like 2##BC017872|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306671|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306858|TCP11L2|255394|t-complex 11 (mouse)-like 2##AK314055|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	0.997921	CTCF.p2:6:0.998
chr19	31141029	31141165	reg1008688.p1	12.077	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	-277717	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	-707815	+	BC026184 NM_001252641	-726547	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	699250	-	FJ211597 NM_001205273	942089	+	TSC_hg19_v1_chr19_+_32836524 NM_001136156 NM_014910 AK292526 AB029007 BX640881 BC136417 AL713775	1695465	+	BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5##NM_001136156|ZNF507|22847|zinc finger protein 507##NM_014910|ZNF507|22847|zinc finger protein 507##AK292526|ZNF507|22847|zinc finger protein 507##AB029007|ZNF507|22847|zinc finger protein 507##BX640881|ZNF507|22847|zinc finger protein 507##BC136417|ZNF507|22847|zinc finger protein 507##AL713775|ZNF507|22847|zinc finger protein 507	0.855583	CTCF.p2:3:0.856
chr3	142547668	142547785	reg1006742.p2	12.077	+	TSC_hg19_v1_chr3_+_142443214 NM_001251845 NM_003304 X89066 BC112338 BC113953 AB255425	-104419	+	TSC_hg19_v1_chr3_+_142442891 Z73903	-104794	+	BC031083 NM_001172312	-171988	+	CR536570 TSC_hg19_v1_chr3_-_142607926 AB528798 AF098269 BC006265 AK315121 AY035400 AK223633 AY358557 AK075478 NM_013363	60170	-	AK123932 BC118666 BC122527 NM_198504 AY424287	134489	-	TSC_hg19_v1_chr3_+_142682794 BC062727	135104	+	NM_001251845|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##NM_003304|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##X89066|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##BC112338|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##BC113953|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##AB255425|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##BC031083|PLS1|5357|plastin 1##NM_001172312|PLS1|5357|plastin 1##CR536570|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AF098269|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##BC006265|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK315121|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AY035400|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK223633|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AY358557|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK075478|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##NM_013363|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK123932|PAQR9|344838|progestin and adipoQ receptor family member IX##BC118666|PAQR9|344838|progestin and adipoQ receptor family member IX##BC122527|PAQR9|344838|progestin and adipoQ receptor family member IX##NM_198504|PAQR9|344838|progestin and adipoQ receptor family member IX##AY424287|PAQR9|344838|progestin and adipoQ receptor family member IX##BC062727|U2SURP|23350|U2 snRNP-associated SURP domain containing	0.0	
chr4	157090193	157090335	reg1008506.p1	12.077	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	-215216	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	-265387	+	AB528059 AJ252011 NM_017419	-302864	-	AB590688 BC051876 BC094746 AF260738 AK300480 AF244813 AK313817 BC041783 BC065490 TSC_hg19_v1_chr4_-_157892334 AM922296 AB033831	801953	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	802214	-	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	802295	-	BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##BC051876|PDGFC|56034|platelet derived growth factor C##BC094746|PDGFC|56034|platelet derived growth factor C##AF260738|PDGFC|56034|platelet derived growth factor C##AK300480|PDGFC|56034|platelet derived growth factor C##AF244813|PDGFC|56034|platelet derived growth factor C##AK313817|PDGFC|56034|platelet derived growth factor C##BC041783|PDGFC|56034|platelet derived growth factor C##AM922296|PDGFC|56034|platelet derived growth factor C##AB033831|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C	0.734959	CTCF.p2:-12:0.735
chr12	70273281	70273422	reg1008840.p1	12.076	+	AK027671 BC015548 NM_001024647 AK027566	-100567	+	NM_175623 NM_175625 AJ312897 AJ312899 AJ312901	-140168	+	TSC_hg19_v1_chr12_+_70132676 AK314547 NM_022456 NM_175624 AJ312896 AJ312898 AJ312900 AK026201 AK225441 BC014553 BC059358	-140712	+	NM_014515 TSC_hg19_v1_chr12_+_70636809 AK315715 NM_001199302	363440	+	AK000662 TSC_hg19_v1_chr12_+_70637212 AF044215 BC011826 BC002597 AF161480	363884	+	AK307479 NM_001199303 AK095789	364160	+	AK027671|RAB3IP|117177|RAB3A interacting protein (rabin3)##BC015548|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_001024647|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK027566|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_175623|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_175625|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312897|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312899|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312901|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK314547|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_022456|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_175624|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312896|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312898|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312900|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK026201|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK225441|RAB3IP|117177|RAB3A interacting protein (rabin3)##BC014553|RAB3IP|117177|RAB3A interacting protein (rabin3)##BC059358|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_014515|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK315715|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##NM_001199302|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK000662|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AF044215|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##BC011826|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##BC002597|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AF161480|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK307479|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##NM_001199303|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK095789|CNOT2|4848|CCR4-NOT transcription complex, subunit 2	0.987848	CTCF.p2:-11:0.988
chr3	167929235	167929384	reg1008027.p1	12.076	+	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	-115878	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	-116194	-	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-475820	+	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	934770	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	935053	-	BX640908 NM_001164000	936212	-	AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus	0.994139	CTCF.p2:-12:0.994
chr10	121249364	121249485	reg1005257.p2	12.075	+	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-282163	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-311077	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-311121	-	NM_002925	46620	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	52766	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	106684	-	BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.0	
chr2	70298065	70298187	reg1006168.p1	12.075	+	AK055994 NM_152792	-108730	-	TSC_hg19_v1_chr2_+_70142307 L06895 BC113531 BC117260 BC143831 BC143832 BC144601 BC069377 BC069433 AB463858 CR536495 CR541692 CU686788 HQ258749	-155744	+	TSC_hg19_v1_chr2_+_70142240 AK301088 AK312734	-155876	+	TSC_hg19_v1_chr2_-_70313405 AK056822	15282	-	TSC_hg19_v1_chr2_-_70314146 BC040598	15987	-	TSC_hg19_v1_chr2_+_70314613 NM_006196	16468	+	AK055994|ASPRV1|151516|aspartic peptidase, retroviral-like 1##NM_152792|ASPRV1|151516|aspartic peptidase, retroviral-like 1##L06895|MXD1|4084|MAX dimerization protein 1##BC113531|MXD1|4084|MAX dimerization protein 1##BC117260|MXD1|4084|MAX dimerization protein 1##BC143831|MXD1|4084|MAX dimerization protein 1##BC143832|MXD1|4084|MAX dimerization protein 1##BC144601|MXD1|4084|MAX dimerization protein 1##BC069377|MXD1|4084|MAX dimerization protein 1##BC069433|MXD1|4084|MAX dimerization protein 1##CR536495|MXD1|4084|MAX dimerization protein 1##CR541692|MXD1|4084|MAX dimerization protein 1##HQ258749|MXD1|4084|MAX dimerization protein 1##AK301088|MXD1|4084|MAX dimerization protein 1##AK312734|MXD1|4084|MAX dimerization protein 1##AK056822|PCBP1-AS1|400960|PCBP1 antisense RNA 1 (non-protein coding)##BC040598|PCBP1-AS1|400960|PCBP1 antisense RNA 1 (non-protein coding)##NM_006196|PCBP1|5093|poly(rC) binding protein 1	0.0	
chr19	46784164	46784251	reg1005477.p1	12.074	+	AY359013 NM_198541 AY672111	-51198	+	AY358692 NM_001135113	-132708	+	AY672112 NM_001002915	-133169	+	TSC_hg19_v1_chr19_+_46800304 NM_152795 AF463492 BC026308 AB118749 AB295039 AK027725 AB527715 BC080551	16106	+	NM_022462 NM_152796 AK297828 AK304747 TSC_hg19_v1_chr19_+_46801682 AK021421 AK021653 AK024095	17453	+	AK314680 NM_152794 AB054067	22682	+	AY359013|IGFL1|374918|IGF-like family member 1##NM_198541|IGFL1|374918|IGF-like family member 1##AY672111|IGFL1|374918|IGF-like family member 1##AY358692|IGFL2|147920|IGF-like family member 2##NM_001135113|IGFL2|147920|IGF-like family member 2##AY672112|IGFL2|147920|IGF-like family member 2##NM_001002915|IGFL2|147920|IGF-like family member 2##NM_152795|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AF463492|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##BC026308|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AB118749|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AB295039|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK027725|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##BC080551|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##NM_022462|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##NM_152796|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK297828|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK304747|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK021421|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK021653|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK024095|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK314680|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##NM_152794|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AB054067|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	0.119931	
chr8	61936148	61936303	reg1006252.p1	12.073	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-344823	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-344937	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-506475	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	264325	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	666121	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	690793	-	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase	0.976967	CTCF.p2:20:0.977
chr9	120407073	120407191	reg1007649.p1	12.073	+	TSC_hg19_v1_chr9_-_120177336 BX649176	-229798	-	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	-229819	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	-957526	+	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	59332	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	59482	+	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	59555	+	BX649176|ASTN2|23245|astrotactin 2##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4	0.967199	CTCF.p2:-11:0.967
chrX	109403856	109403953	reg1007192.p1	12.072	+	TSC_hg19_v1_chrX_+_109246360 BC085605	-157549	+	TSC_hg19_v1_chrX_+_109246341 NM_032227 AK026332	-157564	+	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	-158034	+	CU687440 TSC_hg19_v1_chrX_-_109561311 AK314596 BC060813	157401	-	TSC_hg19_v1_chrX_-_109561314 BX648797 NM_001025580 NM_015365	157442	-	TSC_hg19_v1_chrX_-_109561428 AJ007014	157542	-	BC085605|TMEM164|84187|transmembrane protein 164##NM_032227|TMEM164|84187|transmembrane protein 164##AK026332|TMEM164|84187|transmembrane protein 164##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164##AK314596|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC060813|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BX648797|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001025580|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_015365|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1	0.300477	CTCF.p2:-13:0.300
chr17	6949221	6949349	reg1007583.p1	12.071	+	AK074674 NM_153357	-2044	-	TSC_hg19_v1_chr17_+_6939347 BC142618 NM_201566	-9900	+	TSC_hg19_v1_chr17_+_6926416 AK122893	-22868	+	D50532 BC027858 BC039011 AK291975 AK292363 NM_006344 NM_182906	34266	-	AF529374 U97197 AB528625 CU677885 DQ892652 DQ895891 NM_080914	68308	-	X55284 TSC_hg19_v1_chr17_-_7018008 M11025	68704	-	AK074674|SLC16A11|162515|solute carrier family 16, member 11 (monocarboxylic acid transporter 11)##NM_153357|SLC16A11|162515|solute carrier family 16, member 11 (monocarboxylic acid transporter 11)##BC142618|SLC16A13|201232|solute carrier family 16, member 13 (monocarboxylic acid transporter 13)##NM_201566|SLC16A13|201232|solute carrier family 16, member 13 (monocarboxylic acid transporter 13)##AK122893|BCL6B|255877|B-cell CLL/lymphoma 6, member B##D50532|CLEC10A|10462|C-type lectin domain family 10, member A##BC027858|CLEC10A|10462|C-type lectin domain family 10, member A##BC039011|CLEC10A|10462|C-type lectin domain family 10, member A##AK291975|CLEC10A|10462|C-type lectin domain family 10, member A##AK292363|CLEC10A|10462|C-type lectin domain family 10, member A##NM_006344|CLEC10A|10462|C-type lectin domain family 10, member A##NM_182906|CLEC10A|10462|C-type lectin domain family 10, member A##AF529374|ASGR2|433|asialoglycoprotein receptor 2##U97197|ASGR2|433|asialoglycoprotein receptor 2##DQ892652|ASGR2|433|asialoglycoprotein receptor 2##DQ895891|ASGR2|433|asialoglycoprotein receptor 2##NM_080914|ASGR2|433|asialoglycoprotein receptor 2##X55284|ASGR2|433|asialoglycoprotein receptor 2##M11025|ASGR2|433|asialoglycoprotein receptor 2	0.811884	CTCF.p2:-18:0.812
chr18	23887299	23887404	reg1006282.p1	12.071	+	TSC_hg19_v1_chr18_+_23806444 NM_005640 AB234096	-80934	+	BC042820 NM_001025096 NM_001025097 NM_144662 BC025393 BC028371 BC028686 BC025389 BC047355 BC021713	-173503	+	AB527567 EU832762 GQ129305 AB300354 AB300355 AB300356 AB300357 AF230662 AF244972 AF257500 AF343880 BC096221 BC096222 BC096223 BC096224 CR542088 CR542103 X79201 TSC_hg19_v1_chr18_-_23670574 AK304305 AK316302 AK316338 AK299082 AK307923 AK289510 NM_001007559 NM_005637 AK301504	-216771	-	NM_001142730 TSC_hg19_v1_chr18_-_24128518	241159	-	AK289870 BC063652 TSC_hg19_v1_chr18_-_24129261 NM_001136205	241890	-	AF542549 NM_198991	332956	-	NM_005640|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##AB234096|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##EU832762|SS18|6760|synovial sarcoma translocation, chromosome 18##GQ129305|SS18|6760|synovial sarcoma translocation, chromosome 18##AF244972|SS18|6760|synovial sarcoma translocation, chromosome 18##AF343880|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096221|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096222|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096223|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096224|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542088|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542103|SS18|6760|synovial sarcoma translocation, chromosome 18##X79201|SS18|6760|synovial sarcoma translocation, chromosome 18##AK304305|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316302|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316338|SS18|6760|synovial sarcoma translocation, chromosome 18##AK299082|SS18|6760|synovial sarcoma translocation, chromosome 18##AK307923|SS18|6760|synovial sarcoma translocation, chromosome 18##AK289510|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001007559|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_005637|SS18|6760|synovial sarcoma translocation, chromosome 18##AK301504|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1##AK289870|KCTD1|284252|potassium channel tetramerisation domain containing 1##BC063652|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001136205|KCTD1|284252|potassium channel tetramerisation domain containing 1##AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1	0.956721	CTCF.p2:-10:0.957
chr3	3057278	3057425	reg1009089.p1	12.071	+	NM_001206956 NM_175613 AK057278 AK314396 BC026119	-123442	+	AK095729 TSC_hg19_v1_chr3_+_2553286	-504071	+	NM_001206955	-776839	+	AK304256 NM_000564 NM_001243099 NM_175724 NM_175725 NM_175726 NM_175727 NM_175728	94706	-	NM_182916 TSC_hg19_v1_chr3_+_3168634 AK290411 BC005184 AL834397 BC012537 AB063105 AF151805 AK124137	111300	+	TSC_hg19_v1_chr3_-_3221376 AF117230 CU675978 CU688352 AK058191 BC059171 CR627060 AK027507 AK312577 BC017419 BC067811	164021	-	NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4##AK095729|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4##AK304256|IL5RA|3568|interleukin 5 receptor, alpha##NM_000564|IL5RA|3568|interleukin 5 receptor, alpha##NM_001243099|IL5RA|3568|interleukin 5 receptor, alpha##NM_175724|IL5RA|3568|interleukin 5 receptor, alpha##NM_175725|IL5RA|3568|interleukin 5 receptor, alpha##NM_175726|IL5RA|3568|interleukin 5 receptor, alpha##NM_175727|IL5RA|3568|interleukin 5 receptor, alpha##NM_175728|IL5RA|3568|interleukin 5 receptor, alpha##NM_182916|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AK290411|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC005184|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AL834397|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC012537|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AB063105|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AF151805|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AF117230|CRBN|51185|cereblon##AK058191|CRBN|51185|cereblon##BC059171|CRBN|51185|cereblon##CR627060|CRBN|51185|cereblon##AK027507|CRBN|51185|cereblon##AK312577|CRBN|51185|cereblon##BC017419|CRBN|51185|cereblon##BC067811|CRBN|51185|cereblon	0.90794	CTCF.p2:12:0.908
chr7	23301582	23301717	reg1006183.p1	12.071	+	AF322909 TSC_hg19_v1_chr7_+_23286426 BC025297 BC011595 CU679974 CU689536 AB528457 DQ892084 DQ895277 BT007074	-15201	+	TSC_hg19_v1_chr7_+_23286407 AJ505015	-15244	+	TSC_hg19_v1_chr7_+_23286393 AK292078 AK296779 AK297031 AK297803 AY359124 BC032783	-15255	+	TSC_hg19_v1_chr7_+_23338957 BC012331 NM_138446 AK127742 AK316559	37316	+	TSC_hg19_v1_chr7_-_23509637 AB529064 CU688032	208030	-	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	208349	-	AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb##BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb##BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb##BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb##AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb##AK292078|GPNMB|10457|glycoprotein (transmembrane) nmb##AK296779|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297031|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297803|GPNMB|10457|glycoprotein (transmembrane) nmb##AY359124|GPNMB|10457|glycoprotein (transmembrane) nmb##BC032783|GPNMB|10457|glycoprotein (transmembrane) nmb##BC012331|C7orf30|115416|chromosome 7 open reading frame 30##NM_138446|C7orf30|115416|chromosome 7 open reading frame 30##AK127742|C7orf30|115416|chromosome 7 open reading frame 30##AK316559|C7orf30|115416|chromosome 7 open reading frame 30##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	0.993357	CTCF.p2:4:0.993
chr22	25568289	25568406	reg1008030.p1	12.069	+	BC171801 NM_001145206	-144407	+	BC130647 BC130649 CR456388 NM_001001663	-233035	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-366137	+	TSC_hg19_v1_chr22_+_25591072 AK025418	22782	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	27497	+	NM_000496	47264	+	BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AK025418|KIAA1671|85379|KIAA1671##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##NM_000496|CRYBB2|1415|crystallin, beta B2	1.079918	CTCF.p2:7:0.986
chrX	117360106	117360239	reg1006141.p3	12.069	+	AK302713 NM_001168301	-108870	-	AL591986 TSC_hg19_v1_chrX_-_117250764 AK316509 NM_001168302 NM_001168303	-109447	-	AK296324 NM_001168299	-240844	-	TSC_hg19_v1_chrX_+_117480068 NM_001184965 NM_001184966 NM_019045 AK127556 BX537578 AL833605 BX538087 AK299711 BC028697 BX648150	119993	+	TSC_hg19_v1_chrX_+_117480490 AM393332 AM393787 EU831942 EU832037 AK304432	120290	+	TSC_hg19_v1_chrX_+_117526665 AL834210	166515	+	AK302713|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168301|KLHL13|90293|kelch-like 13 (Drosophila)##AL591986|KLHL13|90293|kelch-like 13 (Drosophila)##AK316509|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)##AK296324|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001184965|WDR44|54521|WD repeat domain 44##NM_001184966|WDR44|54521|WD repeat domain 44##NM_019045|WDR44|54521|WD repeat domain 44##AK127556|WDR44|54521|WD repeat domain 44##BX537578|WDR44|54521|WD repeat domain 44##AL833605|WDR44|54521|WD repeat domain 44##BX538087|WDR44|54521|WD repeat domain 44##AK299711|WDR44|54521|WD repeat domain 44##BC028697|WDR44|54521|WD repeat domain 44##BX648150|WDR44|54521|WD repeat domain 44##AM393332|WDR44|54521|WD repeat domain 44##AM393787|WDR44|54521|WD repeat domain 44##EU831942|WDR44|54521|WD repeat domain 44##EU832037|WDR44|54521|WD repeat domain 44##AK304432|WDR44|54521|WD repeat domain 44##AL834210|WDR44|54521|WD repeat domain 44	0.641272	CTCF.p2:27:0.641
chr4	6252571	6252697	reg1006303.p1	12.068	+	TSC_hg19_v1_chr4_-_6202277 AK294356 AK307983 AK056126 AM412307 AM412308 AM412309 AM412310 BC026343 NM_001099433 NM_144720	-50350	-	DQ206871 TSC_hg19_v1_chr4_-_5894794 NM_001014809	-357890	-	BC009987 TSC_hg19_v1_chr4_-_5891940	-360706	-	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	18934	+	Y18064 TSC_hg19_v1_chr4_+_6271588	18960	+	TSC_hg19_v1_chr4_+_6271608 AK295986 BC030130 AK312897	18992	+	AK294356|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK307983|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK056126|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412307|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412308|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412309|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412310|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##BC026343|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_001099433|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_144720|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##DQ206871|CRMP1|1400|collapsin response mediator protein 1##NM_001014809|CRMP1|1400|collapsin response mediator protein 1##BC009987|CRMP1|1400|collapsin response mediator protein 1##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)##AK295986|WFS1|7466|Wolfram syndrome 1 (wolframin)##BC030130|WFS1|7466|Wolfram syndrome 1 (wolframin)##AK312897|WFS1|7466|Wolfram syndrome 1 (wolframin)	0.99958	CTCF.p2:-5:1.000
chr9	125227369	125227529	reg1008217.p1	12.068	+	AK304403 TSC_hg19_v1_chr9_+_125137614	-89842	+	TSC_hg19_v1_chr9_+_125133330 AK290022 M59979 AB590429 DQ180740 DQ180741 DQ180742 S36219 S36271 S78220	-94107	+	NM_000962 NM_080591 TSC_hg19_v1_chr9_+_125133302 BC029840	-94178	+	NM_001004451 AB529234 BC136933 BC136938	12770	-	AB528201 NM_054107	45631	+	AB529305 NM_001004452 BC131606	53970	+	AK304403|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##AK290022|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##M59979|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##DQ180740|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##DQ180741|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##DQ180742|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##S36219|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##S36271|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##S78220|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##NM_000962|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##NM_080591|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##BC029840|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##NM_001004451|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1##BC136933|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1##BC136938|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1##NM_054107|OR1J2|26740|olfactory receptor, family 1, subfamily J, member 2##NM_001004452|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4##BC131606|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4	0.090778	
chr19	14311153	14311290	reg1006960.p2	12.066	+	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	-50421	-	TSC_hg19_v1_chr19_+_14247979 BX537706	-63230	+	AK302134 TSC_hg19_v1_chr19_-_14247402 BC036521 AK001466 NM_018154	-63799	-	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	5827	-	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	180828	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	181034	+	BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##AK302134|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC036521|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK001466|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##NM_018154|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule	0.954169	CTCF.p2:-11:0.954
chr20	62495674	62495789	reg1006019.p2	12.066	+	NM_080622	-3166	+	TSC_hg19_v1_chr20_-_62462618 BC052269 BC073800	-33134	-	AK131482 NM_025224	-58876	-	NM_001243891 NM_001243892 NM_001243894 NM_001243895 NM_003288 NM_199359 NM_199360 NM_199361 NM_199362 NM_199363 TSC_hg19_v1_chr20_+_62496622 AK298366 AK055068 AK297064 AK314501	872	+	TSC_hg19_v1_chr20_+_62496638 AF004430	909	+	TSC_hg19_v1_chr20_+_62496650 AK223031	930	+	NM_080622|ABHD16B|140701|abhydrolase domain containing 16B##BC052269|ZBTB46|140685|zinc finger and BTB domain containing 46##BC073800|ZBTB46|140685|zinc finger and BTB domain containing 46##AK131482|ZBTB46|140685|zinc finger and BTB domain containing 46##NM_025224|ZBTB46|140685|zinc finger and BTB domain containing 46##NM_001243891|TPD52L2|7165|tumor protein D52-like 2##NM_001243892|TPD52L2|7165|tumor protein D52-like 2##NM_001243894|TPD52L2|7165|tumor protein D52-like 2##NM_001243895|TPD52L2|7165|tumor protein D52-like 2##NM_003288|TPD52L2|7165|tumor protein D52-like 2##NM_199359|TPD52L2|7165|tumor protein D52-like 2##NM_199360|TPD52L2|7165|tumor protein D52-like 2##NM_199361|TPD52L2|7165|tumor protein D52-like 2##NM_199362|TPD52L2|7165|tumor protein D52-like 2##NM_199363|TPD52L2|7165|tumor protein D52-like 2##AK298366|TPD52L2|7165|tumor protein D52-like 2##AK055068|TPD52L2|7165|tumor protein D52-like 2##AK297064|TPD52L2|7165|tumor protein D52-like 2##AK314501|TPD52L2|7165|tumor protein D52-like 2##AF004430|TPD52L2|7165|tumor protein D52-like 2##AK223031|TPD52L2|7165|tumor protein D52-like 2	0.0	
chr1	205366302	205366416	reg1005324.p1	12.064	+	AK299227 AK001610 NM_018203 AK096590	-40319	-	BC036076 TSC_hg19_v1_chr1_-_205313311	-53049	-	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	-75516	-	AB084764 AB084765 AB085610 AB096677 AB096678 AB096679 AB096680 AB096681 AB096682 BC036636 AK302392 NM_001001552 NM_001199050 NM_001199051 NM_001199052	24837	-	NM_002596 NM_212502 NM_212503 TSC_hg19_v1_chr1_+_205473688 AK293756 AK296320 AK295654	107346	+	AY353237 AY353240 TSC_hg19_v1_chr1_+_205473802 AY353238 BC011526 AY353239	107463	+	AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A##BC036076|KLHDC8A|55220|kelch domain containing 8A##AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AB084764|LEMD1|93273|LEM domain containing 1##AB084765|LEMD1|93273|LEM domain containing 1##AB085610|LEMD1|93273|LEM domain containing 1##AB096677|LEMD1|93273|LEM domain containing 1##AB096678|LEMD1|93273|LEM domain containing 1##AB096679|LEMD1|93273|LEM domain containing 1##AB096680|LEMD1|93273|LEM domain containing 1##AB096681|LEMD1|93273|LEM domain containing 1##AB096682|LEMD1|93273|LEM domain containing 1##BC036636|LEMD1|93273|LEM domain containing 1##AK302392|LEMD1|93273|LEM domain containing 1##NM_001001552|LEMD1|93273|LEM domain containing 1##NM_001199050|LEMD1|93273|LEM domain containing 1##NM_001199051|LEMD1|93273|LEM domain containing 1##NM_001199052|LEMD1|93273|LEM domain containing 1##NM_002596|CDK18|5129|cyclin-dependent kinase 18##NM_212502|CDK18|5129|cyclin-dependent kinase 18##NM_212503|CDK18|5129|cyclin-dependent kinase 18##AK293756|CDK18|5129|cyclin-dependent kinase 18##AK296320|CDK18|5129|cyclin-dependent kinase 18##AK295654|CDK18|5129|cyclin-dependent kinase 18##AY353237|CDK18|5129|cyclin-dependent kinase 18##AY353240|CDK18|5129|cyclin-dependent kinase 18##AY353238|CDK18|5129|cyclin-dependent kinase 18##BC011526|CDK18|5129|cyclin-dependent kinase 18##AY353239|CDK18|5129|cyclin-dependent kinase 18	0.0	
chr6	41650024	41650135	reg1006882.p1	12.064	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	-43857	+	TSC_hg19_v1_chr6_+_41514342 BC052803	-135742	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	-135920	+	AJ608793 AJ608794 AJ608792 TSC_hg19_v1_chr6_-_41673723	23622	-	TSC_hg19_v1_chr6_-_41702787 AJ608787 BC032448 NM_007162	52686	-	M33782 TSC_hg19_v1_chr6_-_41703347	53267	-	NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor##BC052803|FOXP4|116113|forkhead box P4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##AJ608793|TFEB|7942|transcription factor EB##AJ608794|TFEB|7942|transcription factor EB##AJ608792|TFEB|7942|transcription factor EB##AJ608787|TFEB|7942|transcription factor EB##BC032448|TFEB|7942|transcription factor EB##NM_007162|TFEB|7942|transcription factor EB##M33782|TFEB|7942|transcription factor EB	0.977724	CTCF.p2:2:0.978
chr13	53383555	53383689	reg1006913.p1	12.063	+	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-69660	-	AB006000 CR541910 TSC_hg19_v1_chr13_-_53313891	-69758	-	NM_001130912 NM_006704 TSC_hg19_v1_chr13_+_53227044 AJ344097 AK292128 AY321358 AK302363 AY271314 BC000911 AK291402 AB528309 AF132856 BT009798 DQ890945 DQ894108	-156680	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	39153	-	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	219290	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	4331494	+	BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AB006000|LECT1|11061|leukocyte cell derived chemotaxin 1##CR541910|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001130912|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##NM_006704|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AJ344097|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK292128|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY321358|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK302363|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY271314|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC000911|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK291402|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF132856|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BT009798|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ890945|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ894108|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	0.999448	CTCF.p2:2:0.999
chr17	49078549	49078683	reg1008853.p1	12.063	+	AK313904 NM_001243877	-133278	-	TSC_hg19_v1_chr17_-_48943716 BC070493 BC098415 NM_001243885 NM_005749	-134920	-	NM_175575	-166012	+	TSC_hg19_v1_chr17_-_49124138 BC007524 BC059946 AK299553 AK307793 AK295098 AK309214 AK024068 NM_001251971	45612	-	TSC_hg19_v1_chr17_-_49198227 AF327452 BC106048 AK302789 AY850123 AB011088 BC146755 BC153878 AK091921 AX747254 NM_001130527 NM_001130528 NM_003971	119539	-	NM_001018136 TSC_hg19_v1_chr17_+_49230927 AK291105 NM_000269 NM_198175	152295	+	AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1##BC070493|TOB1|10140|transducer of ERBB2, 1##BC098415|TOB1|10140|transducer of ERBB2, 1##NM_001243885|TOB1|10140|transducer of ERBB2, 1##NM_005749|TOB1|10140|transducer of ERBB2, 1##NM_175575|WFIKKN2|124857|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2##BC007524|SPAG9|9043|sperm associated antigen 9##BC059946|SPAG9|9043|sperm associated antigen 9##AK299553|SPAG9|9043|sperm associated antigen 9##AK307793|SPAG9|9043|sperm associated antigen 9##AK295098|SPAG9|9043|sperm associated antigen 9##AK309214|SPAG9|9043|sperm associated antigen 9##AK024068|SPAG9|9043|sperm associated antigen 9##NM_001251971|SPAG9|9043|sperm associated antigen 9##AF327452|SPAG9|9043|sperm associated antigen 9##AK302789|SPAG9|9043|sperm associated antigen 9##AY850123|SPAG9|9043|sperm associated antigen 9##AB011088|SPAG9|9043|sperm associated antigen 9##BC146755|SPAG9|9043|sperm associated antigen 9##BC153878|SPAG9|9043|sperm associated antigen 9##AK091921|SPAG9|9043|sperm associated antigen 9##NM_001130527|SPAG9|9043|sperm associated antigen 9##NM_001130528|SPAG9|9043|sperm associated antigen 9##NM_003971|SPAG9|9043|sperm associated antigen 9##NM_001018136|NME1-NME2|654364|NME1-NME2 readthrough##AK291105|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_000269|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_198175|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in	0.856587	CTCF.p2:-15:0.857
chr2	98316770	98316878	reg1007253.p1	12.063	+	TSC_hg19_v1_chr2_-_98280591 NM_005735	-36250	-	TSC_hg19_v1_chr2_-_98280472 CU678694 DQ893438 DQ896748 AB528334 BC006372 X82207 BC004374 BC010090	-36394	-	TSC_hg19_v1_chr2_-_98275064 BC025274	-41744	-	L05148 NM_001079 AK303341 AK310637 AK310628 BC053878	13218	+	AB083211 NM_207519	34044	+	AK025852 TSC_hg19_v1_chr2_-_98408976	92098	-	NM_005735|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##DQ893438|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##DQ896748|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC006372|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##X82207|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC004374|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC010090|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC025274|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##L05148|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_001079|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK303341|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310637|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310628|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##BC053878|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AB083211|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_207519|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK025852|TMEM131|23505|transmembrane protein 131	0.0	
chr7	150053627	150053777	reg1008122.p1	12.063	+	TSC_hg19_v1_chr7_-_150038719 BC000069 L07329 U77594 AB015632 AK092804 AK312197 NM_002889	-14951	-	AL832660 NM_138434	-26795	+	BX640643 NM_001164458	-32993	-	TSC_hg19_v1_chr7_+_150065333 AK292670	11643	+	TSC_hg19_v1_chr7_+_150065881 NM_001099695 NM_001099696 NM_013400	12168	+	TSC_hg19_v1_chr7_+_150065968 AK225227 AK025356	12290	+	BC000069|RARRES2|5919|retinoic acid receptor responder (tazarotene induced) 2##U77594|RARRES2|5919|retinoic acid receptor responder (tazarotene induced) 2##AB015632|RARRES2|5919|retinoic acid receptor responder (tazarotene induced) 2##AK092804|RARRES2|5919|retinoic acid receptor responder (tazarotene induced) 2##AK312197|RARRES2|5919|retinoic acid receptor responder (tazarotene induced) 2##NM_002889|RARRES2|5919|retinoic acid receptor responder (tazarotene induced) 2##AL832660|C7orf29|113763|chromosome 7 open reading frame 29##NM_138434|C7orf29|113763|chromosome 7 open reading frame 29##BX640643|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)##NM_001164458|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)##AK292670|REPIN1|29803|replication initiator 1##NM_001099695|REPIN1|29803|replication initiator 1##NM_001099696|REPIN1|29803|replication initiator 1##NM_013400|REPIN1|29803|replication initiator 1##AK225227|REPIN1|29803|replication initiator 1##AK025356|REPIN1|29803|replication initiator 1	0.891612	CTCF.p2:-9:0.892
chr14	47050416	47050551	reg1008125.p1	12.062	+	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-1327837	-	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	-1328116	-	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-1445294	+	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	70500	-	BC028193 NM_182830	761932	-	AK309211 NM_001113498	1093673	-	AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	0.766524	CTCF.p2:-7:0.767
chr4	155543915	155544032	reg1008520.p1	12.061	+	TSC_hg19_v1_chr4_-_155533903 NM_000509 NM_021870	-10052	-	AK290824 TSC_hg19_v1_chr4_-_155533868	-10112	-	TSC_hg19_v1_chr4_-_155533809 AK289422 BC021674 BC007044 BX538098	-10165	-	TSC_hg19_v1_chr4_+_155665114 AK292598	121145	+	TSC_hg19_v1_chr4_+_155665151 AY546085 AY546086 NM_004744 AF071510	121243	+	NM_144979 AK302720 BC028588	158489	+	NM_000509|FGG|2266|fibrinogen gamma chain##NM_021870|FGG|2266|fibrinogen gamma chain##AK290824|FGG|2266|fibrinogen gamma chain##AK289422|FGG|2266|fibrinogen gamma chain##BC021674|FGG|2266|fibrinogen gamma chain##BC007044|FGG|2266|fibrinogen gamma chain##BX538098|FGG|2266|fibrinogen gamma chain##AK292598|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AY546085|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AY546086|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_004744|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AF071510|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_144979|RBM46|166863|RNA binding motif protein 46##AK302720|RBM46|166863|RNA binding motif protein 46##BC028588|RBM46|166863|RNA binding motif protein 46	0.985262	CTCF.p2:17:0.985
chr9	124861690	124861820	reg1008791.p1	12.061	+	AF521886 NM_001139442 NM_194252	-5871	-	TSC_hg19_v1_chr9_-_124855560 AK125178	-6167	-	AY032952 NM_138709	-356692	+	TSC_hg19_v1_chr9_-_124922039 BC001016 AF044953	60257	-	TSC_hg19_v1_chr9_-_124922059 AK314135 AK301520 NM_014222	60318	-	AK128877 NM_198469 BC133690 AK302081 BC143440	60452	+	AF521886|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_001139442|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_194252|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##BC001016|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AF044953|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AK314135|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##NM_014222|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AK128877|MORN5|254956|MORN repeat containing 5##NM_198469|MORN5|254956|MORN repeat containing 5##BC133690|MORN5|254956|MORN repeat containing 5##AK302081|MORN5|254956|MORN repeat containing 5##BC143440|MORN5|254956|MORN repeat containing 5	0.999236	CTCF.p2:-8:0.999
chr9	33624094	33624220	reg1007358.p1	12.061	+	NM_001244752	-99747	+	TSC_hg19_v1_chr9_-_33473921 NM_022917 NM_139235	-150227	-	TSC_hg19_v1_chr9_-_33473890 BC020450 AK026258 AK293969	-150261	-	TSC_hg19_v1_chr9_+_33624216 M62898	61	+	AB298285 NM_001197097 NM_007343 AB528734 X71345 X72781 TSC_hg19_v1_chr9_+_33750676 BC030238 AY052783 AB298286 NM_001197098	126483	+	BC069476 BC069494 NM_002771 X15505 D45417	171407	+	NM_001244752|ANKRD18B|441459|ankyrin repeat domain 18B##NM_022917|NOL6|65083|nucleolar protein family 6 (RNA-associated)##NM_139235|NOL6|65083|nucleolar protein family 6 (RNA-associated)##BC020450|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AK026258|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AK293969|NOL6|65083|nucleolar protein family 6 (RNA-associated)##M62898|ANXA2P2|304|annexin A2 pseudogene 2##AB298285|PRSS3|5646|protease, serine, 3##NM_001197097|PRSS3|5646|protease, serine, 3##NM_007343|PRSS3|5646|protease, serine, 3##X71345|PRSS3|5646|protease, serine, 3##X72781|PRSS3|5646|protease, serine, 3##BC030238|PRSS3|5646|protease, serine, 3##AY052783|PRSS3|5646|protease, serine, 3##AB298286|PRSS3|5646|protease, serine, 3##NM_001197098|PRSS3|5646|protease, serine, 3##BC069476|PRSS3|5646|protease, serine, 3##BC069494|PRSS3|5646|protease, serine, 3##NM_002771|PRSS3|5646|protease, serine, 3##X15505|PRSS3|5646|protease, serine, 3##D45417|PRSS3|5646|protease, serine, 3	0.978662	CTCF.p2:-9:0.979
chr20	10407869	10408003	reg1009117.p1	12.060	+	TSC_hg19_v1_chr20_-_10200139 AK124961	-207793	-	TSC_hg19_v1_chr20_+_10199575 NM_003081 NM_130811 AK094560 AK098347 D21267 AK223617 AK314359 AK289647 BC010647 BX647443 AK098767 L19760 L19761	-208409	+	NM_022096 NM_198798 AK097689 TSC_hg19_v1_chr20_+_10015744 BC022878 BC028189 BC011591	-392204	+	AF221993 NM_018848	4633	-	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	6903	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	8040	+	AK124961|LOC100131208|100131208|uncharacterized LOC100131208##NM_003081|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_130811|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK094560|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098347|SNAP25|6616|synaptosomal-associated protein, 25kDa##D21267|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK223617|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK314359|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK289647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BC010647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BX647443|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098767|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19760|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19761|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_022096|ANKRD5|63926|ankyrin repeat domain 5##NM_198798|ANKRD5|63926|ankyrin repeat domain 5##AK097689|ANKRD5|63926|ankyrin repeat domain 5##BC022878|ANKRD5|63926|ankyrin repeat domain 5##BC028189|ANKRD5|63926|ankyrin repeat domain 5##BC011591|ANKRD5|63926|ankyrin repeat domain 5##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94	0.998955	CTCF.p2:5:0.999
chr3	115859063	115859188	reg1006018.p1	12.060	+	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-516706	+	NM_001130064 NM_002045	-516975	+	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	-993011	-	AK315286 TSC_hg19_v1_chr3_-_116164338	305206	-	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	305248	-	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	2894408	-	AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43##BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315286|LSAMP|4045|limbic system-associated membrane protein##BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11	0.472918	CTCF.p2:2:0.473
chr4	8405019	8405124	reg1006393.p1	12.060	+	TSC_hg19_v1_chr4_+_8271480 NM_053044 AY040094 BC034390 BC035717 AY280665 AY280666 AB528940 DQ891188 DQ894371	-133496	+	TSC_hg19_v1_chr4_+_8201038 BC030283 AK074093 NM_018986 BC068094 AK074402 AK126165 BC131785	-204039	+	DQ413176 AJ748600 AJ748601 TSC_hg19_v1_chr4_-_8160541 BC122567 AK130044 AK094754 BC067214 NM_001130083 NM_001130084 NM_001130085 NM_001130086 NM_001130087 NM_001130088 NM_032432	-244537	-	TSC_hg19_v1_chr4_-_8430196 AK313242	25130	-	Y11411 BC017053 TSC_hg19_v1_chr4_-_8442447 AK225080 NM_001101667 NM_003501	37385	-	TSC_hg19_v1_chr4_+_8442503 NM_152544	37443	+	NM_053044|HTRA3|94031|HtrA serine peptidase 3##AY040094|HTRA3|94031|HtrA serine peptidase 3##BC034390|HTRA3|94031|HtrA serine peptidase 3##BC035717|HTRA3|94031|HtrA serine peptidase 3##AY280665|HTRA3|94031|HtrA serine peptidase 3##AY280666|HTRA3|94031|HtrA serine peptidase 3##DQ891188|HTRA3|94031|HtrA serine peptidase 3##DQ894371|HTRA3|94031|HtrA serine peptidase 3##BC030283|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074093|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##NM_018986|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC068094|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074402|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK126165|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC131785|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##DQ413176|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748600|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748601|ABLIM2|84448|actin binding LIM protein family, member 2##BC122567|ABLIM2|84448|actin binding LIM protein family, member 2##AK130044|ABLIM2|84448|actin binding LIM protein family, member 2##AK094754|ABLIM2|84448|actin binding LIM protein family, member 2##BC067214|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130083|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130084|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130085|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130086|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130087|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130088|ABLIM2|84448|actin binding LIM protein family, member 2##NM_032432|ABLIM2|84448|actin binding LIM protein family, member 2##AK313242|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##Y11411|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##BC017053|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK225080|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_001101667|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_003501|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_152544|METTL19|152992|methyltransferase like 19	0.987418	CTCF.p2:4:0.987
chr22	36317878	36318011	reg1008131.p1	12.058	+	TSC_hg19_v1_chr22_-_36236476 AF229058 AL009266 AK314632 BC013115 BC025281 AK291460 NM_001031695 NM_001082576 NM_001082577 NM_014309	-81419	-	CR456559 TSC_hg19_v1_chr22_-_36236341	-81604	-	AB463238 AB649123 AY960684 CU013159 CU013447 CU692956 DQ891720 DQ894897 DQ894898 TSC_hg19_v1_chr22_-_36236318	-81653	-	AY072786 DQ778625 TSC_hg19_v1_chr22_-_36424553 AK055213 NM_001082578 NM_001082579	106595	-	BC042918 BC038352 AK025349 AF070675 BC070144 AF305227 BC050596 AY014902 AY014903 AY014904 AY014905 NM_145640	238934	-	AY014906 AY014907 NM_145641 NM_145642	244280	-	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AY072786|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ778625|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK055213|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082578|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082579|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC042918|APOL3|80833|apolipoprotein L, 3##BC038352|APOL3|80833|apolipoprotein L, 3##AK025349|APOL3|80833|apolipoprotein L, 3##AF070675|APOL3|80833|apolipoprotein L, 3##AF305227|APOL3|80833|apolipoprotein L, 3##BC050596|APOL3|80833|apolipoprotein L, 3##AY014902|APOL3|80833|apolipoprotein L, 3##AY014903|APOL3|80833|apolipoprotein L, 3##AY014904|APOL3|80833|apolipoprotein L, 3##AY014905|APOL3|80833|apolipoprotein L, 3##NM_145640|APOL3|80833|apolipoprotein L, 3##AY014906|APOL3|80833|apolipoprotein L, 3##AY014907|APOL3|80833|apolipoprotein L, 3##NM_145641|APOL3|80833|apolipoprotein L, 3##NM_145642|APOL3|80833|apolipoprotein L, 3	0.820336	CTCF.p2:5:0.820
chr3	129653448	129653580	reg1009074.p1	12.058	+	TSC_hg19_v1_chr3_+_129612705 AK127796	-40796	+	TSC_hg19_v1_chr3_-_129612445 NM_001128224	-41096	-	AK291448 BC039859 NM_001017395	-54204	-	NM_007117 TSC_hg19_v1_chr3_+_129693145	39615	+	NM_001136152 BC127755	147224	+	TSC_hg19_v1_chr3_-_129830276 BC083497	176781	-	AK127796|LOC100507032|100507032|uncharacterized LOC100507032##NM_001128224|TMCC1|23023|transmembrane and coiled-coil domain family 1##AK291448|TMCC1|23023|transmembrane and coiled-coil domain family 1##BC039859|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001017395|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_007117|TRH|7200|thyrotropin-releasing hormone##NM_001136152|ALG1L2|644974|asparagine-linked glycosylation 1-like 2	0.999014	CTCF.p2:14:0.999
chr5	75370463	75370578	reg1006786.p1	12.058	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-357260	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	-362258	-	NM_001130105	-562715	-	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	8751	+	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	328596	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	548625	-	BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001130105|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2	0.03054	
chr9	70131950	70132087	reg1008183.p1	12.058	+	AL136793 NM_001098805	-750038	+	AF265442 BC069006 AK293173 NM_001085457	-869464	-	NM_001085476	-929815	-	NM_001126334	46796	-	NM_001099279 NM_199244	297712	-	CU688346 TSC_hg19_v1_chr9_-_70490092	358063	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.99859	CTCF.p2:11:0.999
chr7	118910136	118910254	reg1006771.p2	12.057	+	NM_019644 AK302407	-1045461	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-1086024	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-1396652	-	AK307139 AB028967 NM_012281	1003509	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	1587825	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	1587965	-	NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12	0.971507	CTCF.p2:2:0.972
chr14	90366394	90366504	reg1006745.p1	12.056	+	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	-280854	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	-483039	-	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-487673	-	BC001787 BX247991 AK298930 AK094740 NM_145231	54611	-	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	55797	+	TSC_hg19_v1_chr14_+_90422278 AK001952 BC015474 AK315549 BX161451	55830	+	AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK001952|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC015474|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK315549|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BX161451|TDP1|55775|tyrosyl-DNA phosphodiesterase 1	0.901054	CTCF.p2:10:0.901
chr5	174961189	174961320	reg1006666.p1	12.056	+	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	-55692	+	NM_000794	-90092	-	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	-809642	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	123784	+	TSC_hg19_v1_chr5_+_175085101 AB023487	123857	+	NM_022304	147209	+	NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1##NM_000794|DRD1|1812|dopamine receptor D1##NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2##AB023487|HRH2|3274|histamine receptor H2##NM_022304|HRH2|3274|histamine receptor H2	0.242261	CTCF.p2:30:0.231
chr6	28324009	28324152	reg1006292.p2	12.055	+	TSC_hg19_v1_chr6_+_28317723 AK091225 AX746861 NM_001242894 NM_001242895 NM_024493 AK122790 AK313532 BC006118	-6354	+	NM_001243241 NM_001243242 NM_001243244 NM_030899	-19929	-	AL833617 NM_001135216 NM_001243243 BC008490	-20163	-	TSC_hg19_v1_chr6_-_28367519 BC041661 AB007886 NM_001163391	43441	-	AK309235 AL833347 AK092117 AX747363 NM_001012455	87173	-	BC133691 BC148315 AY324826 NM_182701	159486	-	AK091225|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001242894|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001242895|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_024493|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##AK122790|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##AK313532|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##BC006118|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001243241|ZNF323|64288|zinc finger protein 323##NM_001243242|ZNF323|64288|zinc finger protein 323##NM_001243244|ZNF323|64288|zinc finger protein 323##NM_030899|ZNF323|64288|zinc finger protein 323##AL833617|ZNF323|64288|zinc finger protein 323##NM_001135216|ZNF323|64288|zinc finger protein 323##NM_001243243|ZNF323|64288|zinc finger protein 323##BC008490|ZNF323|64288|zinc finger protein 323##BC041661|ZSCAN12|9753|zinc finger and SCAN domain containing 12##AB007886|ZSCAN12|9753|zinc finger and SCAN domain containing 12##NM_001163391|ZSCAN12|9753|zinc finger and SCAN domain containing 12##AK309235|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AL833347|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AK092117|ZSCAN23|222696|zinc finger and SCAN domain containing 23##NM_001012455|ZSCAN23|222696|zinc finger and SCAN domain containing 23##BC133691|GPX6|257202|glutathione peroxidase 6 (olfactory)##BC148315|GPX6|257202|glutathione peroxidase 6 (olfactory)##AY324826|GPX6|257202|glutathione peroxidase 6 (olfactory)##NM_182701|GPX6|257202|glutathione peroxidase 6 (olfactory)	0.803171	CTCF.p2:15:0.803
chr11	77259417	77259547	reg1007448.p1	12.054	+	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	-74650	-	TSC_hg19_v1_chr11_-_77122998 AK296006 AK055228	-136483	-	AY313782 AY326450 NM_182833	-261020	-	BC040443 NM_173039 TSC_hg19_v1_chr11_+_77300718 AB028147	41218	+	AB590787 AF026003 BT019907 AF005422 BC119634 BC119635 TSC_hg19_v1_chr11_-_77348840 U53454 AK315259 X91788 NM_001293	89332	-	AF380176 AB527448 TSC_hg19_v1_chr11_-_77531769 BC015360 NM_016578 AK098130	272350	-	U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK296006|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK055228|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##BC040443|AQP11|282679|aquaporin 11##NM_173039|AQP11|282679|aquaporin 11##AB028147|AQP11|282679|aquaporin 11##AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF380176|RSF1|51773|remodeling and spacing factor 1##BC015360|RSF1|51773|remodeling and spacing factor 1##NM_016578|RSF1|51773|remodeling and spacing factor 1	0.975382	CTCF.p2:23:0.975
chr1	25157294	25157415	reg1006922.p1	12.054	+	TSC_hg19_v1_chr1_+_25071976 AF109196 AB463494 AM393644 CU680328 CR533501	-85349	+	TSC_hg19_v1_chr1_+_25071937 AK315051 AK301466 AK307142	-85421	+	NM_013943 TSC_hg19_v1_chr1_+_25071875 AL117424 AK001624 AK095959 BC012444 AF097330	-85523	+	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	99071	-	TSC_hg19_v1_chr1_-_25256761 AK301044	99385	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	99432	-	AF109196|CLIC4|25932|chloride intracellular channel 4##AM393644|CLIC4|25932|chloride intracellular channel 4##CR533501|CLIC4|25932|chloride intracellular channel 4##AK315051|CLIC4|25932|chloride intracellular channel 4##AK301466|CLIC4|25932|chloride intracellular channel 4##AK307142|CLIC4|25932|chloride intracellular channel 4##NM_013943|CLIC4|25932|chloride intracellular channel 4##AL117424|CLIC4|25932|chloride intracellular channel 4##AK001624|CLIC4|25932|chloride intracellular channel 4##AK095959|CLIC4|25932|chloride intracellular channel 4##BC012444|CLIC4|25932|chloride intracellular channel 4##AF097330|CLIC4|25932|chloride intracellular channel 4##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3	0.976737	CTCF.p2:17:0.977
chr17	58220373	58220480	reg1006675.p1	12.054	+	TSC_hg19_v1_chr17_-_58213006 AK311448	-7415	-	TSC_hg19_v1_chr17_-_58156283 AK127708 AK314655 BC119771 BC119813 BX640819 BX640831 CR627418 NM_022070 AF349752	-64072	-	BC006971 TSC_hg19_v1_chr17_-_58042099 AK294806 AK296197 NM_016125	-178319	-	TSC_hg19_v1_chr17_+_58227302 BC057792 NM_000717 AK289715 AK298710	6864	+	TSC_hg19_v1_chr17_+_58227333 BC069649 M83670 BC074768 CR541766 CU691238	6936	+	CU691084 TSC_hg19_v1_chr17_-_58469313 BC054344	248892	-	AK127708|HEATR6|63897|HEAT repeat containing 6##AK314655|HEATR6|63897|HEAT repeat containing 6##BC119771|HEATR6|63897|HEAT repeat containing 6##BC119813|HEATR6|63897|HEAT repeat containing 6##BX640819|HEATR6|63897|HEAT repeat containing 6##BX640831|HEATR6|63897|HEAT repeat containing 6##CR627418|HEATR6|63897|HEAT repeat containing 6##NM_022070|HEATR6|63897|HEAT repeat containing 6##AF349752|HEATR6|63897|HEAT repeat containing 6##BC006971|RNFT1|51136|ring finger protein, transmembrane 1##AK294806|RNFT1|51136|ring finger protein, transmembrane 1##AK296197|RNFT1|51136|ring finger protein, transmembrane 1##NM_016125|RNFT1|51136|ring finger protein, transmembrane 1##BC057792|CA4|762|carbonic anhydrase IV##NM_000717|CA4|762|carbonic anhydrase IV##AK289715|CA4|762|carbonic anhydrase IV##AK298710|CA4|762|carbonic anhydrase IV##BC069649|CA4|762|carbonic anhydrase IV##M83670|CA4|762|carbonic anhydrase IV##BC074768|CA4|762|carbonic anhydrase IV##CR541766|CA4|762|carbonic anhydrase IV##BC054344|USP32|84669|ubiquitin specific peptidase 32	0.994211	CTCF.p2:-7:0.994
chr2	242672113	242672218	reg1006632.p2	12.054	+	TSC_hg19_v1_chr2_+_242641311 AK289958 AK074422 NM_032329 AK300790 BC005370 BC071899 AF189286 AB527747 CU675145 CU687190 EU832330 EU832415	-30770	+	AB593140 TSC_hg19_v1_chr2_+_242626482	-45689	+	TSC_hg19_v1_chr2_-_242626231 AK223434 BC147006 BC147010 BC171894 BC171902 BC171903 NM_001165031 NM_012145	-45862	-	TSC_hg19_v1_chr2_+_242674044 AK304764 AK094149 BC071598 NM_152783 AK091725 AK304773 AX747146 BC036604	1876	+	AB040610 NM_022134 BC117293 BC117295	44115	+	NM_001167600 NM_001167601 TSC_hg19_v1_chr2_+_242750226	78031	+	AK289958|ING5|84289|inhibitor of growth family, member 5##AK074422|ING5|84289|inhibitor of growth family, member 5##NM_032329|ING5|84289|inhibitor of growth family, member 5##BC005370|ING5|84289|inhibitor of growth family, member 5##BC071899|ING5|84289|inhibitor of growth family, member 5##AF189286|ING5|84289|inhibitor of growth family, member 5##AK223434|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC147006|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC147010|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171894|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171902|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171903|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##NM_001165031|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##NM_012145|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##AK304764|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK094149|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##BC071598|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##NM_152783|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK091725|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK304773|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##BC036604|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AB040610|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##NM_022134|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##BC117293|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##BC117295|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##NM_001167600|NEU4|129807|sialidase 4##NM_001167601|NEU4|129807|sialidase 4	0.849786	CTCF.p2:18:0.830
chr1	158476303	158476426	reg1007156.p1	12.053	+	AB529285 NM_001004472	-26698	+	BC137323 BC137324 AB529282 NM_001004473	-41053	+	NM_001004476	-85709	-	NM_001005189	41530	-	NM_001160325	57029	-	NM_001004477	73324	-	NM_001004472|OR10R2|343406|olfactory receptor, family 10, subfamily R, member 2##BC137323|OR10K1|391109|olfactory receptor, family 10, subfamily K, member 1##BC137324|OR10K1|391109|olfactory receptor, family 10, subfamily K, member 1##NM_001004473|OR10K1|391109|olfactory receptor, family 10, subfamily K, member 1##NM_001004476|OR10K2|391107|olfactory receptor, family 10, subfamily K, member 2##NM_001005189|OR6Y1|391112|olfactory receptor, family 6, subfamily Y, member 1##NM_001160325|OR6P1|128366|olfactory receptor, family 6, subfamily P, member 1##NM_001004477|OR10X1|128367|olfactory receptor, family 10, subfamily X, member 1	0.870582	CTCF.p2:-10:0.871
chr2	70875145	70875256	reg1004428.p2	12.052	+	NM_001099691 NM_003236	-94054	-	AK309220 AK309066 CU675103 BT006833 AF149096 AF149097 AF149098 X70340 K03222 M31172 AK290151 AK312899 BC005308 TSC_hg19_v1_chr2_-_70780995	-94392	-	AM393139 AB528755 AK225148 BC026293 TSC_hg19_v1_chr2_-_70529198 AL833147 BC014975 AK225151 AK309543 AK315877 AK027574 NM_032822	-345994	-	BC065525 NM_001185054	119646	-	TSC_hg19_v1_chr2_-_70995330 BC056881 BC051882 BC010237 BC041666 BC027876 AK297250 AK309773 AK291007 AB209227 AB593080 NM_001185055 NM_001617 NM_017482 NM_017488	120091	-	BC039536 AB463644 AY541030 NM_001004311	142552	-	NM_001099691|TGFA|7039|transforming growth factor, alpha##NM_003236|TGFA|7039|transforming growth factor, alpha##AK309220|TGFA|7039|transforming growth factor, alpha##AK309066|TGFA|7039|transforming growth factor, alpha##BT006833|TGFA|7039|transforming growth factor, alpha##AF149096|TGFA|7039|transforming growth factor, alpha##AF149097|TGFA|7039|transforming growth factor, alpha##AF149098|TGFA|7039|transforming growth factor, alpha##X70340|TGFA|7039|transforming growth factor, alpha##K03222|TGFA|7039|transforming growth factor, alpha##M31172|TGFA|7039|transforming growth factor, alpha##AK290151|TGFA|7039|transforming growth factor, alpha##AK312899|TGFA|7039|transforming growth factor, alpha##BC005308|TGFA|7039|transforming growth factor, alpha##AM393139|FAM136A|84908|family with sequence similarity 136, member A##AK225148|FAM136A|84908|family with sequence similarity 136, member A##BC026293|FAM136A|84908|family with sequence similarity 136, member A##AL833147|FAM136A|84908|family with sequence similarity 136, member A##BC014975|FAM136A|84908|family with sequence similarity 136, member A##AK225151|FAM136A|84908|family with sequence similarity 136, member A##AK309543|FAM136A|84908|family with sequence similarity 136, member A##AK315877|FAM136A|84908|family with sequence similarity 136, member A##AK027574|FAM136A|84908|family with sequence similarity 136, member A##NM_032822|FAM136A|84908|family with sequence similarity 136, member A##BC065525|ADD2|119|adducin 2 (beta)##NM_001185054|ADD2|119|adducin 2 (beta)##BC056881|ADD2|119|adducin 2 (beta)##BC051882|ADD2|119|adducin 2 (beta)##BC010237|ADD2|119|adducin 2 (beta)##BC041666|ADD2|119|adducin 2 (beta)##BC027876|ADD2|119|adducin 2 (beta)##AK297250|ADD2|119|adducin 2 (beta)##AK309773|ADD2|119|adducin 2 (beta)##AK291007|ADD2|119|adducin 2 (beta)##AB209227|ADD2|119|adducin 2 (beta)##AB593080|ADD2|119|adducin 2 (beta)##NM_001185055|ADD2|119|adducin 2 (beta)##NM_001617|ADD2|119|adducin 2 (beta)##NM_017482|ADD2|119|adducin 2 (beta)##NM_017488|ADD2|119|adducin 2 (beta)##BC039536|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##AY541030|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##NM_001004311|FIGLA|344018|folliculogenesis specific basic helix-loop-helix	0.411269	CTCF.p2:-2:0.411
chr10	131926164	131926284	reg1007356.p1	12.051	+	TSC_hg19_v1_chr10_-_131909090 EU250747 AK094118	-17143	-	TSC_hg19_v1_chr10_-_131762539 AK097335	-163699	-	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	-164171	-	TSC_hg19_v1_chr10_+_131934662 NM_001199868 NM_006541 BC005289 AK022131 AF118652	8431	+	TSC_hg19_v1_chr10_+_131934675 AF118649 AK225609	8451	+	TSC_hg19_v1_chr10_+_131934681 AJ010841 AB463691	8491	+	EU250747|LOC387723|387723|uncharacterized LOC387723##AK094118|LOC387723|387723|uncharacterized LOC387723##AK097335|EBF3|253738|early B-cell factor 3##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3##NM_001199868|GLRX3|10539|glutaredoxin 3##NM_006541|GLRX3|10539|glutaredoxin 3##BC005289|GLRX3|10539|glutaredoxin 3##AK022131|GLRX3|10539|glutaredoxin 3##AF118652|GLRX3|10539|glutaredoxin 3##AF118649|GLRX3|10539|glutaredoxin 3##AK225609|GLRX3|10539|glutaredoxin 3##AJ010841|GLRX3|10539|glutaredoxin 3	0.0	
chr11	29181249	29181376	reg1006352.p1	12.051	+	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-1049459	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-1051434	+	TSC_hg19_v1_chr11_-_28129704 BC026090 NM_031217	-1051589	-	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	857219	-	NM_000510 NM_001018080	1071250	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	1163340	+	BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##BC026090|KIF18A|81930|kinesin family member 18A##NM_031217|KIF18A|81930|kinesin family member 18A##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46	0.04724	
chr14	42069858	42069979	reg1007355.p1	12.051	+	BC053537 BC068566 BC030611 NM_203301	-2168257	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-2168561	-	TSC_hg19_v1_chr14_+_39736592 BC039017 AK315254 BC029513 BC051363 U73682	-2333345	+	NM_152447 AK096627	6849	+	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	2906557	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	3296580	+	BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##BC039017|CTAGE5|4253|CTAGE family, member 5##AK315254|CTAGE5|4253|CTAGE family, member 5##BC029513|CTAGE5|4253|CTAGE family, member 5##BC051363|CTAGE5|4253|CTAGE family, member 5##U73682|CTAGE5|4253|CTAGE family, member 5##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28	0.061211	
chr2	21265861	21265977	reg1006565.p2	12.051	+	M12480 TSC_hg19_v1_chr2_-_21252799	-13126	-	X03326 TSC_hg19_v1_chr2_-_21233978	-31963	-	TSC_hg19_v1_chr2_-_21231406 X03324	-34459	-	TSC_hg19_v1_chr2_-_21266818 AB587530 HM487065 M14081 M14162 BC051278	902	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	980	-	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	1010	-	M12480|APOB|338|apolipoprotein B (including Ag(x) antigen)##X03326|APOB|338|apolipoprotein B (including Ag(x) antigen)##X03324|APOB|338|apolipoprotein B (including Ag(x) antigen)##HM487065|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14081|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14162|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC051278|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)	0.999642	CTCF.p2:-12:1.000
chr2	88971449	88971561	reg1006071.p1	12.051	+	AF110146 BC126354 BC126356 AK128659 TSC_hg19_v1_chr2_-_88926983 AK315287 AF193339 NM_004836	-44527	-	AK058098 NM_152670 BC029522	-147321	+	NM_001135649	-219453	-	TSC_hg19_v1_chr2_+_88991190 NM_144563 AY050633 BC015529	19710	+	BX648045 TSC_hg19_v1_chr2_+_89065391 AL137717 BC031698	93896	+	S49006 TSC_hg19_v1_chr2_-_89165772	194207	-	AF110146|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126354|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126356|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK128659|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK315287|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AF193339|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##NM_004836|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK058098|C2orf51|200523|chromosome 2 open reading frame 51##NM_152670|C2orf51|200523|chromosome 2 open reading frame 51##BC029522|C2orf51|200523|chromosome 2 open reading frame 51##NM_001135649|FOXI3|344167|forkhead box I3##NM_144563|RPIA|22934|ribose 5-phosphate isomerase A##AY050633|RPIA|22934|ribose 5-phosphate isomerase A##BC015529|RPIA|22934|ribose 5-phosphate isomerase A##BX648045|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AL137717|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##BC031698|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2	0.96403	CTCF.p2:19:0.964
chr3	65770882	65771008	reg1007872.p1	12.050	+	TSC_hg19_v1_chr3_-_64673677 BC036770 AK310571	-1097259	-	TSC_hg19_v1_chr3_-_64673334 AF261918 BC130578 BC171764 AF488803 NM_182920	-1097598	-	AB037733 TSC_hg19_v1_chr3_-_64672299	-1098650	-	BC062367 NM_001033057 NM_004742 NM_015520 TSC_hg19_v1_chr3_-_66024518	253568	-	AK092495 AX747571 NM_173471	348339	+	NM_001164796	500222	+	BC036770|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AK310571|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##NM_001164796|SLC25A26|115286|solute carrier family 25, member 26	0.981669	CTCF.p2:-13:0.982
chr5	127537142	127537274	reg1008345.p1	12.050	+	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	-117735	+	AK090949 AX746698 TSC_hg19_v1_chr5_-_127419417	-117849	-	TSC_hg19_v1_chr5_-_127418765 AF088062 BX648677 BC036629	-118445	-	TSC_hg19_v1_chr5_-_127873553 AK300440	336309	-	NM_001999 TSC_hg19_v1_chr5_-_127873939 AF193046	336633	-	TSC_hg19_v1_chr5_+_128300789 BC041945	763595	+	AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##AK090949|FLJ33630|644873|uncharacterized LOC644873##AF088062|FLJ33630|644873|uncharacterized LOC644873##BX648677|FLJ33630|644873|uncharacterized LOC644873##BC036629|FLJ33630|644873|uncharacterized LOC644873##AK300440|FBN2|2201|fibrillin 2##NM_001999|FBN2|2201|fibrillin 2##AF193046|FBN2|2201|fibrillin 2##BC041945|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6	0.027204	
chr12	85268488	85268590	reg1006671.p2	12.048	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	-2187278	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	-2187622	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	-2187839	+	AK291207 AK022853 TSC_hg19_v1_chr12_-_85306547	38004	-	TSC_hg19_v1_chr12_-_85306575 BC022253 BC070040	38033	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	38053	-	AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK291207|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK022853|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC022253|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC070040|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15	0.99918	CTCF.p2:-15:0.999
chr2	130154890	130155025	reg1006721.p1	12.048	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-1078657	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-1226910	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-1306096	+	NM_032144 AL136727	582278	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	731901	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	747654	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.996954	CTCF.p2:20:0.997
chr7	130725298	130725450	reg1007916.p1	12.048	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-306447	-	AF294347 AF431815 BC038415 NM_052933	-354019	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-371779	-	TSC_hg19_v1_chr7_-_130792857 BC047367	67485	-	AK294384 NM_001145354	69480	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	287232	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.079776	
chr1	113423703	113423812	reg1006663.p2	12.047	+	NM_001004440 NM_182759 BC112268 BC117479 BC143949 BC144042 BC144043 AY325116 AY325119	-160564	+	BC011803 BC064628 AL133644 AB527803 EU832164 EU832258 AK093270 AX748024 BC073828 NM_005167	-165846	-	TSC_hg19_v1_chr1_-_113250031 NM_001042678 NM_175744	-173731	-	BC045664 AK094064 NM_001166496 AF239919 AL162079 TSC_hg19_v1_chr1_-_113498818 AK296688 AK312500 BC026317	74960	-	TSC_hg19_v1_chr1_-_113498861 AK303603 AJ438943 NM_003051	75144	-	TSC_hg19_v1_chr1_+_113499054 BC023568 BC047723 BC062295 BX648855	75276	+	NM_001004440|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##NM_182759|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC112268|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC117479|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC143949|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144042|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144043|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325116|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325119|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC011803|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC064628|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AL133644|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832164|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832258|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AK093270|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC073828|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_005167|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_001042678|RHOC|389|ras homolog gene family, member C##NM_175744|RHOC|389|ras homolog gene family, member C##BC045664|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK094064|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_001166496|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AF239919|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AL162079|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK296688|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK312500|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC026317|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK303603|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AJ438943|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_003051|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC062295|LOC100506392|100506392|uncharacterized LOC100506392##BX648855|LOC100506392|100506392|uncharacterized LOC100506392	0.999601	CTCF.p2:-5:1.000
chr16	4338534	4338657	reg1006442.p1	12.047	+	TSC_hg19_v1_chr16_-_4323057 AK309301	-15530	-	NM_003223 S73885 TSC_hg19_v1_chr16_-_4323025	-15583	-	X57435 DQ893617 DQ895293 CR541726 CU679751 AB464303 TSC_hg19_v1_chr16_-_4322885 BC010576	-15767	-	AF325914 NM_032575 AB463687	43656	+	AK095566 TSC_hg19_v1_chr16_+_4385160	46556	+	TSC_hg19_v1_chr16_-_4401268 AF151894 AF349455 BC005024 AK026514 NM_016069	62723	-	AK309301|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##X57435|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ893617|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ895293|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##CR541726|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##BC010576|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##AF325914|GLIS2|84662|GLIS family zinc finger 2##NM_032575|GLIS2|84662|GLIS family zinc finger 2##AK095566|GLIS2|84662|GLIS family zinc finger 2##AF151894|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AF349455|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##BC005024|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AK026514|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##NM_016069|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)	0.978291	CTCF.p2:-13:0.978
chr2	201577807	201577932	reg1004964.p1	12.047	+	AK297930 AK307738 TSC_hg19_v1_chr2_+_201474048	-103872	+	AB046692 NM_001159 TSC_hg19_v1_chr2_+_201450748 BC117179 BC117181	-127085	+	TSC_hg19_v1_chr2_+_201450590 AK301052	-127282	+	TSC_hg19_v1_chr2_+_201676291 NM_001207067 NM_014670 AL833518	98417	+	TSC_hg19_v1_chr2_+_201676632 Z70221 AK096489	98745	+	D13630 TSC_hg19_v1_chr2_+_201676645 BC001804	98777	+	AK297930|AOX1|316|aldehyde oxidase 1##AK307738|AOX1|316|aldehyde oxidase 1##AB046692|AOX1|316|aldehyde oxidase 1##NM_001159|AOX1|316|aldehyde oxidase 1##BC117179|AOX1|316|aldehyde oxidase 1##BC117181|AOX1|316|aldehyde oxidase 1##AK301052|AOX1|316|aldehyde oxidase 1##NM_001207067|BZW1|9689|basic leucine zipper and W2 domains 1##NM_014670|BZW1|9689|basic leucine zipper and W2 domains 1##AL833518|BZW1|9689|basic leucine zipper and W2 domains 1##Z70221|BZW1|9689|basic leucine zipper and W2 domains 1##AK096489|BZW1|9689|basic leucine zipper and W2 domains 1##D13630|BZW1|9689|basic leucine zipper and W2 domains 1##BC001804|BZW1|9689|basic leucine zipper and W2 domains 1	0.164034	
chr3	48506924	48507047	reg1007284.p1	12.047	+	TSC_hg19_v1_chr3_+_48488182 AK291829 BC014153 BC020563 AF451323 NM_032166 NM_130384 CU676562 EU832638 EU832715 AF319566	-18771	+	TSC_hg19_v1_chr3_+_48488138 AK300548 AK315075	-18842	+	AK126594 TSC_hg19_v1_chr3_+_48481716 AF161448	-25227	+	BC019863 TSC_hg19_v1_chr3_+_48507228 NM_016381 NM_033629 AF151105 AJ243797	294	+	TSC_hg19_v1_chr3_+_48507641 AK315196 BC023630	661	+	TSC_hg19_v1_chr3_-_48514495 AB097007 BC020279 AL117413 AK310083 AL832568 AF151051 BC001463 AK027728 AK298799	7546	-	AK291829|ATRIP|84126|ATR interacting protein##BC014153|ATRIP|84126|ATR interacting protein##BC020563|ATRIP|84126|ATR interacting protein##AF451323|ATRIP|84126|ATR interacting protein##NM_032166|ATRIP|84126|ATR interacting protein##NM_130384|ATRIP|84126|ATR interacting protein##EU832638|TREX1|11277|three prime repair exonuclease 1##EU832715|TREX1|11277|three prime repair exonuclease 1##AK300548|ATRIP|84126|ATR interacting protein##AK315075|ATRIP|84126|ATR interacting protein##AK126594|CCDC72|51372|coiled-coil domain containing 72##AF161448|CCDC72|51372|coiled-coil domain containing 72##BC019863|TREX1|11277|three prime repair exonuclease 1##NM_016381|TREX1|11277|three prime repair exonuclease 1##NM_033629|TREX1|11277|three prime repair exonuclease 1##AF151105|TREX1|11277|three prime repair exonuclease 1##AJ243797|TREX1|11277|three prime repair exonuclease 1##AK315196|TREX1|11277|three prime repair exonuclease 1##BC023630|TREX1|11277|three prime repair exonuclease 1##AB097007|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC020279|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL117413|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL832568|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF151051|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC001463|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK298799|SHISA5|51246|shisa homolog 5 (Xenopus laevis)	0.945568	CTCF.p2:-9:0.946
chr15	34635363	34635514	reg1009021.p1	12.045	+	BC008886 TSC_hg19_v1_chr15_-_34635355 BC063023 AB043104 NM_018648	-103	-	TSC_hg19_v1_chr15_-_34630254 AF531260 AK292550 BC051709 BC070107 NM_001042495	-5181	-	TSC_hg19_v1_chr15_-_34629950 BC033894 AF477977 AF531259 BC051744 DQ138323 NM_001042494 NM_001042496 BX648195	-5475	-	AF482429 NM_175741 BC114518 BC114567 BC033392 AK098568	2690	+	AF529233 TSC_hg19_v1_chr15_-_34659398 BC144236 AK290273 AK308910 AL832237 BC092463 NM_153613 BC048430 AY734233 AF542964	24142	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_181077	46507	-	BC008886|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)##BC063023|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)##AB043104|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)##NM_018648|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)##AF531260|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AK292550|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##BC051709|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##BC070107|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##NM_001042495|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##BC033894|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AF477977|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AF531259|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##BC051744|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##DQ138323|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##NM_001042494|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##NM_001042496|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##BX648195|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AF482429|C15orf55|256646|chromosome 15 open reading frame 55##NM_175741|C15orf55|256646|chromosome 15 open reading frame 55##BC114518|C15orf55|256646|chromosome 15 open reading frame 55##BC114567|C15orf55|256646|chromosome 15 open reading frame 55##BC033392|C15orf55|256646|chromosome 15 open reading frame 55##AK098568|C15orf55|256646|chromosome 15 open reading frame 55##AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_181077|GOLGA8A|23015|golgin A8 family, member A	0.992075	CTCF.p2:4:0.992
chr16	89927345	89927474	reg1006859.p1	12.044	+	TSC_hg19_v1_chr16_+_89894882 BC111030 NM_032451 AJ422077 BC011119	-32504	+	BT007366 TSC_hg19_v1_chr16_-_89883059 AK299282 X99226 BC022498 BC008979 BC120979 BC127633 BC064540 BC120978 BC141971 BC141972 NM_000135 NM_001018112	-44364	-	TSC_hg19_v1_chr16_-_89831446 AK301168	-95955	-	TSC_hg19_v1_chr16_+_89940003 NM_014972 AK301053	12594	+	TSC_hg19_v1_chr16_+_89940021 BC011884 AK024679 BC009349 BC000959 AB528245 AB587412 CU674474 CU679309 EU446609	12637	+	AK024232 NM_002386	56877	+	BC111030|SPIRE2|84501|spire homolog 2 (Drosophila)##NM_032451|SPIRE2|84501|spire homolog 2 (Drosophila)##AJ422077|SPIRE2|84501|spire homolog 2 (Drosophila)##BC011119|SPIRE2|84501|spire homolog 2 (Drosophila)##BT007366|FANCA|2175|Fanconi anemia, complementation group A##AK299282|FANCA|2175|Fanconi anemia, complementation group A##X99226|FANCA|2175|Fanconi anemia, complementation group A##BC022498|FANCA|2175|Fanconi anemia, complementation group A##BC008979|FANCA|2175|Fanconi anemia, complementation group A##BC120979|FANCA|2175|Fanconi anemia, complementation group A##BC127633|FANCA|2175|Fanconi anemia, complementation group A##BC064540|FANCA|2175|Fanconi anemia, complementation group A##BC120978|FANCA|2175|Fanconi anemia, complementation group A##BC141971|FANCA|2175|Fanconi anemia, complementation group A##BC141972|FANCA|2175|Fanconi anemia, complementation group A##NM_000135|FANCA|2175|Fanconi anemia, complementation group A##NM_001018112|FANCA|2175|Fanconi anemia, complementation group A##AK301168|FANCA|2175|Fanconi anemia, complementation group A##NM_014972|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##AK301053|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##BC011884|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##AK024679|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##BC009349|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##BC000959|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##EU446609|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##AK024232|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)##NM_002386|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)	0.522399	CTCF.p2:-3:0.522
chr5	61649993	61650128	reg1007309.p1	12.044	+	TSC_hg19_v1_chr5_+_61602278 AK297347 AK307880 EF560716 EF560728 EU832810 GQ129246 AK315866	-47790	+	TSC_hg19_v1_chr5_+_61602066 BC047544	-47978	+	TSC_hg19_v1_chr5_+_61601970 NM_001098511 NM_001243952 NM_001243953 NM_004520	-48087	+	AB590206 DQ891482 DQ894669 DQ894841 TSC_hg19_v1_chr5_-_61699710 AF102147 BC010874 AK299480	49598	-	TSC_hg19_v1_chr5_-_61699730 BC002841 BC017885 NM_014473 AK292723	49699	-	TSC_hg19_v1_chr5_+_61708589 NM_016338 AK001696 BC033776	58564	+	AK297347|KIF2A|3796|kinesin heavy chain member 2A##AK307880|KIF2A|3796|kinesin heavy chain member 2A##EF560716|KIF2A|3796|kinesin heavy chain member 2A##EF560728|KIF2A|3796|kinesin heavy chain member 2A##EU832810|KIF2A|3796|kinesin heavy chain member 2A##GQ129246|KIF2A|3796|kinesin heavy chain member 2A##AK315866|KIF2A|3796|kinesin heavy chain member 2A##BC047544|KIF2A|3796|kinesin heavy chain member 2A##NM_001098511|KIF2A|3796|kinesin heavy chain member 2A##NM_001243952|KIF2A|3796|kinesin heavy chain member 2A##NM_001243953|KIF2A|3796|kinesin heavy chain member 2A##NM_004520|KIF2A|3796|kinesin heavy chain member 2A##DQ891482|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##DQ894669|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##DQ894841|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##AF102147|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##BC010874|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##AK299480|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##BC002841|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##BC017885|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##NM_014473|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##AK292723|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##NM_016338|IPO11|51194|importin 11##AK001696|IPO11|51194|importin 11##BC033776|IPO11|51194|importin 11	0.123667	
chr9	130717827	130717948	reg1006512.p1	12.044	+	BC137087 BC137088 BC047949 NM_203305 BC142952	-4956	-	BC015233 NM_003863	-17125	-	TSC_hg19_v1_chr9_-_130700134 AF061729 BC107863 AB013361 AK312121	-17744	-	TSC_hg19_v1_chr9_-_130742813 AK058004 NM_001035254	24922	-	AK122729 NM_197956	111711	-	TSC_hg19_v1_chr9_+_130830492 AK290991 NM_001006641	112596	+	BC137087|FAM102A|399665|family with sequence similarity 102, member A##BC137088|FAM102A|399665|family with sequence similarity 102, member A##BC047949|FAM102A|399665|family with sequence similarity 102, member A##NM_203305|FAM102A|399665|family with sequence similarity 102, member A##BC142952|FAM102A|399665|family with sequence similarity 102, member A##BC015233|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##NM_003863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AF061729|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##BC107863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AB013361|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK312121|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK058004|FAM102A|399665|family with sequence similarity 102, member A##NM_001035254|FAM102A|399665|family with sequence similarity 102, member A##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1##AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	0.916288	CTCF.p2:-3:0.916
chr1	212955877	212956021	reg1007884.p1	12.043	+	TSC_hg19_v1_chr1_-_212873317 AF255346 NM_018664	-82629	-	TSC_hg19_v1_chr1_-_212873221 BC117489 BC117491	-82719	-	AB463432 HQ258061 TSC_hg19_v1_chr1_-_212873132	-82829	-	AB528354 CU675531 DQ892899 DQ896149 AK222996 AF201941 TSC_hg19_v1_chr1_-_212965111 BC007067 AK223260 AK303250 BC036048 AF255793 AK313730 NM_001042549 NM_015471	9172	-	AK293129 NM_001042552 NM_001042553 NM_001146169 NM_001146170 NM_001146171 AK304557 TSC_hg19_v1_chr1_+_212965255 BC113638 BC117485 BC143956 BC143957 AL832248 BC048115 HQ258161	9269	+	AY640234 BC035742 NM_001024601	65019	-	AF255346|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##NM_018664|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117489|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117491|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##HQ258061|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##DQ892899|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##DQ896149|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK222996|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF201941|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC007067|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK223260|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK303250|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC036048|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF255793|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK313730|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001042549|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_015471|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK293129|TATDN3|128387|TatD DNase domain containing 3##NM_001042552|TATDN3|128387|TatD DNase domain containing 3##NM_001042553|TATDN3|128387|TatD DNase domain containing 3##NM_001146169|TATDN3|128387|TatD DNase domain containing 3##NM_001146170|TATDN3|128387|TatD DNase domain containing 3##NM_001146171|TATDN3|128387|TatD DNase domain containing 3##AK304557|TATDN3|128387|TatD DNase domain containing 3##BC113638|TATDN3|128387|TatD DNase domain containing 3##BC117485|TATDN3|128387|TatD DNase domain containing 3##BC143956|TATDN3|128387|TatD DNase domain containing 3##BC143957|TATDN3|128387|TatD DNase domain containing 3##AL832248|TATDN3|128387|TatD DNase domain containing 3##BC048115|TATDN3|128387|TatD DNase domain containing 3##HQ258161|TATDN3|128387|TatD DNase domain containing 3##AY640234|C1orf227|149643|chromosome 1 open reading frame 227##BC035742|C1orf227|149643|chromosome 1 open reading frame 227##NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227	0.889135	CTCF.p2:21:0.889
chr20	57782909	57783044	reg1007970.p1	12.043	+	NM_178457	-16902	+	TSC_hg19_v1_chr20_-_57617873 AK314449 AK002157 BC010649 BC013969 AF151865 AK298135 NM_016045	-165108	-	BT007293 TSC_hg19_v1_chr20_-_57607361 BC003671 BC001690 AK315493 AK026556 AF077045 AF052955 BC105811 NM_006886	-175613	-	BC008876 TSC_hg19_v1_chr20_+_57875490 BC053866 NM_000114 NM_207032 NM_207033 NM_207034	92513	+	TSC_hg19_v1_chr20_+_57875665 J05081 X52001 AB590897 CU679163 BT007085 DQ096281	92781	+	AK098788 NM_001199505	369587	+	NM_178457|ZNF831|128611|zinc finger protein 831##AK314449|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK002157|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC010649|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC013969|SLMO2|51012|slowmo homolog 2 (Drosophila)##AF151865|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK298135|SLMO2|51012|slowmo homolog 2 (Drosophila)##NM_016045|SLMO2|51012|slowmo homolog 2 (Drosophila)##BT007293|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC003671|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC001690|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK315493|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK026556|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF077045|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF052955|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC105811|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##NM_006886|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC008876|EDN3|1908|endothelin 3##BC053866|EDN3|1908|endothelin 3##NM_000114|EDN3|1908|endothelin 3##NM_207032|EDN3|1908|endothelin 3##NM_207033|EDN3|1908|endothelin 3##NM_207034|EDN3|1908|endothelin 3##J05081|EDN3|1908|endothelin 3##X52001|EDN3|1908|endothelin 3##BT007085|EDN3|1908|endothelin 3##DQ096281|EDN3|1908|endothelin 3##AK098788|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199505|PHACTR3|116154|phosphatase and actin regulator 3	0.995513	CTCF.p2:25:0.996
chr6	138608490	138608603	reg1007385.p1	12.043	+	BC069109 NM_021635 AF189269 AF189270	-68920	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	-125410	+	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	-179978	-	TSC_hg19_v1_chr6_+_138725355 NM_014320 AF117616 BC016806 BC016807 AK057928 AY427823	116839	+	BC010290 TSC_hg19_v1_chr6_+_138725477 BC008205 BC093037 AF411610	116999	+	AK307584 NM_001144060 TSC_hg19_v1_chr6_-_138820579	212032	-	BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##NM_014320|HEBP2|23593|heme binding protein 2##AF117616|HEBP2|23593|heme binding protein 2##BC016806|HEBP2|23593|heme binding protein 2##BC016807|HEBP2|23593|heme binding protein 2##AK057928|HEBP2|23593|heme binding protein 2##AY427823|HEBP2|23593|heme binding protein 2##BC010290|HEBP2|23593|heme binding protein 2##BC008205|HEBP2|23593|heme binding protein 2##BC093037|HEBP2|23593|heme binding protein 2##AF411610|HEBP2|23593|heme binding protein 2##AK307584|NHSL1|57224|NHS-like 1##NM_001144060|NHSL1|57224|NHS-like 1	0.997046	CTCF.p2:-2:0.997
chr11	1674051	1674166	reg1006779.p1	12.042	+	AB126074 AJ628247 NM_001001480	-23090	+	AB528165 AB126073 NM_001012709	-30763	-	AY597812 AB528164 AB126072 NM_001012708	-44455	-	AB126075 NM_001012416 BC130399 BC133035	44330	+	TSC_hg19_v1_chr11_-_1769086 AK289574	95032	-	NM_001170820 TSC_hg19_v1_chr11_-_1771824	97716	-	AB126074|KRTAP5-5|439915|keratin associated protein 5-5##AJ628247|KRTAP5-5|439915|keratin associated protein 5-5##NM_001001480|KRTAP5-5|439915|keratin associated protein 5-5##AB126073|KRTAP5-4|387267|keratin associated protein 5-4##NM_001012709|KRTAP5-4|387267|keratin associated protein 5-4##AY597812|KRTAP5-3|387266|keratin associated protein 5-3##AB126072|KRTAP5-3|387266|keratin associated protein 5-3##NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3##AB126075|KRTAP5-6|440023|keratin associated protein 5-6##NM_001012416|KRTAP5-6|440023|keratin associated protein 5-6##BC130399|KRTAP5-6|440023|keratin associated protein 5-6##BC133035|KRTAP5-6|440023|keratin associated protein 5-6##AK289574|IFITM10|402778|interferon induced transmembrane protein 10##NM_001170820|IFITM10|402778|interferon induced transmembrane protein 10	1.032066	CTCF.p2:-6:1.000
chr6	138188277	138188373	reg1005197.p1	12.042	+	BC051352 AK096362 NM_175747	-372800	-	TSC_hg19_v1_chr6_-_137540556 NM_000416	-647767	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-647780	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	212	+	TSC_hg19_v1_chr6_-_138189314 AK124173	1025	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	240243	-	BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector	0.991545	CTCF.p2:-49:0.992
chr6	26003437	26003578	reg1008675.p1	12.042	+	CR936707 TSC_hg19_v1_chr6_+_25963398	-40099	+	TSC_hg19_v1_chr6_+_25963029 BX640949 AK313248 BC026930 NM_006355 AB209906	-40474	+	U90544 NM_005835	-72616	-	CU686848 AB590705 EU446958 BC069492 TSC_hg19_v1_chr6_-_26018016 BC101593 BC112140 NM_005325	14492	-	TSC_hg19_v1_chr6_+_26020680 BC066245 BC066246 BC066247 BC067490 BC067491 BC069303 CR541858 NM_003529	17190	+	BC066248 BC066249 BC067495 BC069654 NM_003538	18399	+	CR936707|TRIM38|10475|tripartite motif containing 38##BX640949|TRIM38|10475|tripartite motif containing 38##AK313248|TRIM38|10475|tripartite motif containing 38##BC026930|TRIM38|10475|tripartite motif containing 38##NM_006355|TRIM38|10475|tripartite motif containing 38##AB209906|TRIM38|10475|tripartite motif containing 38##U90544|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2##NM_005835|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2##EU446958|HIST1H1A|3024|histone cluster 1, H1a##BC069492|HIST1H1A|3024|histone cluster 1, H1a##BC101593|HIST1H1A|3024|histone cluster 1, H1a##BC112140|HIST1H1A|3024|histone cluster 1, H1a##NM_005325|HIST1H1A|3024|histone cluster 1, H1a##BC066245|HIST1H3A|8350|histone cluster 1, H3a##BC066246|HIST1H3A|8350|histone cluster 1, H3a##BC066247|HIST1H3A|8350|histone cluster 1, H3a##BC067490|HIST1H3A|8350|histone cluster 1, H3a##BC067491|HIST1H3A|8350|histone cluster 1, H3a##BC069303|HIST1H3A|8350|histone cluster 1, H3a##CR541858|HIST1H3A|8350|histone cluster 1, H3a##NM_003529|HIST1H3A|8350|histone cluster 1, H3a##BC066248|HIST1H4A|8359|histone cluster 1, H4a##BC066249|HIST1H4A|8359|histone cluster 1, H4a##BC067495|HIST1H4A|8359|histone cluster 1, H4a##BC069654|HIST1H4A|8359|histone cluster 1, H4a##NM_003538|HIST1H4A|8359|histone cluster 1, H4a	0.984748	CTCF.p2:7:0.985
chr9	87873811	87873923	reg1007599.p1	12.042	+	U12140 TSC_hg19_v1_chr9_+_87285349	-588535	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-589115	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-589171	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	483004	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	682207	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	682311	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.555784	CTCF.p2:11:0.556
chr12	55247842	55247982	reg1008130.p1	12.041	+	AY590150 AF144011 BC062682 BC069108 NM_053283 EF503687 EF503688 EF503689	-205707	-	CU686745 CU687522 AF238867 BC069317 NM_033277 BC062217	-219261	-	CR457003 AY063766 U48707 TSC_hg19_v1_chr12_-_54982398 BC022470 NM_006741 AK123969	-265548	-	NM_058173 AF414087 AY359062 BC111421 AY651259	420	+	BC132732 BC132734 NM_001098815	127709	-	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	130590	-	AY590150|DCD|117159|dermcidin##AF144011|DCD|117159|dermcidin##BC062682|DCD|117159|dermcidin##BC069108|DCD|117159|dermcidin##NM_053283|DCD|117159|dermcidin##EF503687|DCD|117159|dermcidin##EF503688|DCD|117159|dermcidin##EF503689|DCD|117159|dermcidin##AF238867|LACRT|90070|lacritin##BC069317|LACRT|90070|lacritin##NM_033277|LACRT|90070|lacritin##BC062217|LACRT|90070|lacritin##CR457003|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AY063766|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##U48707|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##BC022470|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_006741|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AK123969|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748	0.013826	
chr9	100149373	100149507	reg1007202.p1	12.041	+	NM_020893 CR749320	-79502	+	AK312806 NM_001201575	-347516	-	AF070448 BC023504 Y14734 AB001928 AK310645 AK310740 BC110512 AY358641 NM_001333	-347962	-	TSC_hg19_v1_chr9_+_100174364 NM_014290 BC028694	24833	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	24939	+	NM_001166116 AK314533	114022	+	NM_020893|C9orf174|100499483|chromosome 9 open reading frame 174##CR749320|C9orf174|100499483|chromosome 9 open reading frame 174##AK312806|CTSL2|1515|cathepsin L2##NM_001201575|CTSL2|1515|cathepsin L2##AF070448|CTSL2|1515|cathepsin L2##BC023504|CTSL2|1515|cathepsin L2##Y14734|CTSL2|1515|cathepsin L2##AB001928|CTSL2|1515|cathepsin L2##AK310645|CTSL2|1515|cathepsin L2##AK310740|CTSL2|1515|cathepsin L2##BC110512|CTSL2|1515|cathepsin L2##AY358641|CTSL2|1515|cathepsin L2##NM_001333|CTSL2|1515|cathepsin L2##NM_014290|TDRD7|23424|tudor domain containing 7##BC028694|TDRD7|23424|tudor domain containing 7##AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7##NM_001166116|TMOD1|7111|tropomodulin 1##AK314533|TMOD1|7111|tropomodulin 1	0.995045	CTCF.p2:-18:0.995
chr1	149658556	149658683	reg1008283.p1	12.040	+	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	-105596	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	-259423	-	NM_001164261 NM_001164262	-852605	+	X14355 AK311303 NM_000566 X14356 AK291451 BC032634 AB527585 BC152383 CU689454 DQ890842 DQ893997 L03418	95653	+	BC110793 AK289664 AK299108 AK296916 NM_001024599 NM_001161334	125299	-	NM_001123375	126616	-	AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##X14355|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##NM_000566|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##X14356|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK291451|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC032634|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC152383|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ890842|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ893997|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##L03418|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##AK289664|HIST2H2BF|440689|histone cluster 2, H2bf##AK299108|HIST2H2BF|440689|histone cluster 2, H2bf##AK296916|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001161334|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001123375|HIST2H3D|653604|histone cluster 2, H3d	0.785704	CTCF.p2:15:0.786
chr2	132430379	132430501	reg1005608.p1	12.040	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-144934	+	AK304811 TSC_hg19_v1_chr2_+_132250648 AK293811 AK300337 AK303293 AK308371 BC093080	-179855	+	TSC_hg19_v1_chr2_-_132250072 NM_001085365	-180379	-	AF038169 NM_013310	49623	+	BC043584 NM_214461	128793	-	AK122643 NM_001508	743706	+	BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK304811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK293811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK300337|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK303293|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK308371|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC093080|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39	0.760895	CTCF.p2:8:0.761
chr2	65291976	65292098	reg1006395.p1	12.040	+	TSC_hg19_v1_chr2_+_65283579 AB011154 NM_015147 AK093846 AK000856 AK299373 AK304110 AK301173 AK098786 BX648774 BC030534 BC002982 BC004873	-8477	+	TSC_hg19_v1_chr2_+_65216532 AK223486 AK313052 BC072423 BC026216 L14595 L19444 AB026689 DQ891127 DQ894306	-75387	+	TSC_hg19_v1_chr2_+_65216485 AK298472 AK315986 NM_003038	-75546	+	AF498929 BT019528 BT019529 CR533479 CR536488 AB464118 AB590355 AM392684 CU674450 DQ894084 EU831590 EU831675 TSC_hg19_v1_chr2_-_65357083 M28209	65038	-	TSC_hg19_v1_chr2_-_65357236 BC000905 BX571747 AL050268 AK303678 AK055927 AK315495	65182	-	TSC_hg19_v1_chr2_-_65357263 NM_004161 NM_015543	65304	-	AB011154|CEP68|23177|centrosomal protein 68kDa##NM_015147|CEP68|23177|centrosomal protein 68kDa##AK093846|CEP68|23177|centrosomal protein 68kDa##AK000856|CEP68|23177|centrosomal protein 68kDa##AK299373|CEP68|23177|centrosomal protein 68kDa##AK304110|CEP68|23177|centrosomal protein 68kDa##AK301173|CEP68|23177|centrosomal protein 68kDa##AK098786|CEP68|23177|centrosomal protein 68kDa##BX648774|CEP68|23177|centrosomal protein 68kDa##BC030534|CEP68|23177|centrosomal protein 68kDa##BC002982|CEP68|23177|centrosomal protein 68kDa##BC004873|CEP68|23177|centrosomal protein 68kDa##AK223486|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK313052|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC072423|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC026216|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L14595|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L19444|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AB026689|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ891127|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ894306|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AF498929|RAB1A|5861|RAB1A, member RAS oncogene family##BT019528|RAB1A|5861|RAB1A, member RAS oncogene family##BT019529|RAB1A|5861|RAB1A, member RAS oncogene family##CR533479|RAB1A|5861|RAB1A, member RAS oncogene family##CR536488|RAB1A|5861|RAB1A, member RAS oncogene family##AM392684|RAB1A|5861|RAB1A, member RAS oncogene family##DQ894084|RAB1A|5861|RAB1A, member RAS oncogene family##EU831590|RAB1A|5861|RAB1A, member RAS oncogene family##EU831675|RAB1A|5861|RAB1A, member RAS oncogene family##M28209|RAB1A|5861|RAB1A, member RAS oncogene family##BC000905|RAB1A|5861|RAB1A, member RAS oncogene family##BX571747|RAB1A|5861|RAB1A, member RAS oncogene family##AL050268|RAB1A|5861|RAB1A, member RAS oncogene family##AK303678|RAB1A|5861|RAB1A, member RAS oncogene family##AK055927|RAB1A|5861|RAB1A, member RAS oncogene family##AK315495|RAB1A|5861|RAB1A, member RAS oncogene family##NM_004161|RAB1A|5861|RAB1A, member RAS oncogene family##NM_015543|RAB1A|5861|RAB1A, member RAS oncogene family	0.0	
chr11	10814120	10814261	reg1008894.p1	12.039	+	TSC_hg19_v1_chr11_+_10772795 BC014335 AK291794 BC020951 BC058914 NM_014633 D63875	-41363	+	TSC_hg19_v1_chr11_-_10715507 NM_001100163 NM_001206880 NM_001206881 NM_130385	-98672	-	TSC_hg19_v1_chr11_-_10715300 AK296336	-98881	-	BC065276 NM_001172705 BX647799 AK123338	15384	-	TSC_hg19_v1_chr11_+_10829631 AK055888	15411	+	TSC_hg19_v1_chr11_-_10830044 AK302886 AK310738	15866	-	BC014335|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK291794|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC058914|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##NM_014633|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##D63875|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##NM_001100163|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001206880|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001206881|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_130385|MRVI1|10335|murine retrovirus integration site 1 homolog##AK296336|MRVI1|10335|murine retrovirus integration site 1 homolog##BC065276|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##NM_001172705|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##BX647799|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK123338|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK055888|LOC144017|144017|uncharacterized LOC144017##AK302886|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK310738|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	0.885388	CTCF.p2:-7:0.885
chr14	32724176	32724304	reg1007785.p1	12.039	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-177734	+	TSC_hg19_v1_chr14_+_32546223 BC075799	-177995	+	TSC_hg19_v1_chr14_+_32546174 BC050059	-178061	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	74296	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	684250	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	1695909	-	NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##BC050059|ARHGAP5|394|Rho GTPase activating protein 5##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)	0.998397	CTCF.p2:6:0.998
chr16	13547917	13548059	reg1007996.p1	12.039	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-552520	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-650269	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-650337	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	466043	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	617098	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	732530	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.93962	CTCF.p2:14:0.940
chr15	33136473	33136601	reg1008071.p1	12.038	+	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-125371	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-126280	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	-202623	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	223698	-	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	466632	+	TSC_hg19_v1_chr15_-_34212524 BC037796	1076021	-	AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3	0.971639	CTCF.p2:-3:0.972
chr14	100149182	100149318	reg1009348.p1	12.037	+	AB593097 AY358173 NM_001127258 NM_032425 BC132877 BC136577 HQ258579 AB593096	-37688	+	TSC_hg19_v1_chr14_-_100070545 NM_001144995	-78666	-	TSC_hg19_v1_chr14_+_99947745 NM_001099402 BC015935 AK311075	-201491	+	TSC_hg19_v1_chr14_+_100150596 AB209749 BC022539 AF094480 NM_006668	1425	+	TSC_hg19_v1_chr14_+_100204058 AK307925	54800	+	AK299812 TSC_hg19_v1_chr14_+_100240040	90741	+	AB593097|HHIPL1|84439|HHIP-like 1##AY358173|HHIPL1|84439|HHIP-like 1##NM_001127258|HHIPL1|84439|HHIP-like 1##NM_032425|HHIPL1|84439|HHIP-like 1##BC132877|HHIPL1|84439|HHIP-like 1##BC136577|HHIPL1|84439|HHIP-like 1##HQ258579|HHIPL1|84439|HHIP-like 1##AB593096|HHIPL1|84439|HHIP-like 1##NM_001144995|CCDC85C|317762|coiled-coil domain containing 85C##NM_001099402|CCNK|8812|cyclin K##BC015935|CCNK|8812|cyclin K##AK311075|CCNK|8812|cyclin K##AB209749|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##BC022539|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##AF094480|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##NM_006668|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##AK307925|EML1|2009|echinoderm microtubule associated protein like 1##AK299812|EML1|2009|echinoderm microtubule associated protein like 1	0.602427	CTCF.p2:-2:0.602
chr19	12871499	12871617	reg1007030.p1	12.037	+	AF440756 AY515705 NM_017682 AK000139 AK225232	-8120	+	TSC_hg19_v1_chr19_+_12848310 NM_004317 AK223363 AK291855 AK293588 AF047469 BC002651 CU678092 U60276	-23234	+	TSC_hg19_v1_chr19_-_12845557 BC040846	-26010	-	CU680326 DQ891339 DQ893360 DQ894521 DQ896679 AB527820 TSC_hg19_v1_chr19_-_12886342 AF044924 BC012443	14769	-	TSC_hg19_v1_chr19_-_12886422 NM_001100176 NM_013312	14869	-	TSC_hg19_v1_chr19_+_12902286 DQ650707	30732	+	AF440756|BEST2|54831|bestrophin 2##AY515705|BEST2|54831|bestrophin 2##NM_017682|BEST2|54831|bestrophin 2##AK000139|BEST2|54831|bestrophin 2##AK225232|BEST2|54831|bestrophin 2##NM_004317|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##AK223363|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##AK291855|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##AK293588|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##AF047469|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##BC002651|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##U60276|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##BC040846|C19orf43|79002|chromosome 19 open reading frame 43##DQ891339|HOOK2|29911|hook homolog 2 (Drosophila)##DQ893360|HOOK2|29911|hook homolog 2 (Drosophila)##DQ894521|HOOK2|29911|hook homolog 2 (Drosophila)##DQ896679|HOOK2|29911|hook homolog 2 (Drosophila)##AF044924|HOOK2|29911|hook homolog 2 (Drosophila)##BC012443|HOOK2|29911|hook homolog 2 (Drosophila)##NM_001100176|HOOK2|29911|hook homolog 2 (Drosophila)##NM_013312|HOOK2|29911|hook homolog 2 (Drosophila)	0.999156	CTCF.p2:1:0.999
chr4	178261034	178261171	reg1006613.p2	12.037	+	TSC_hg19_v1_chr4_+_178231027 AK001720 BC025954 AK307692 AB079071	-30042	+	TSC_hg19_v1_chr4_+_178231006 NM_018248	-30109	+	AK313879 BC035212 U58111 X94216 U43142 BC063685 NM_005429 TSC_hg19_v1_chr4_-_177713956	-547292	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	102439	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	102491	-	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	102541	-	AK001720|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##BC025954|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK307692|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AB079071|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##NM_018248|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK313879|VEGFC|7424|vascular endothelial growth factor C##BC035212|VEGFC|7424|vascular endothelial growth factor C##U58111|VEGFC|7424|vascular endothelial growth factor C##X94216|VEGFC|7424|vascular endothelial growth factor C##U43142|VEGFC|7424|vascular endothelial growth factor C##BC063685|VEGFC|7424|vascular endothelial growth factor C##NM_005429|VEGFC|7424|vascular endothelial growth factor C##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase	0.797086	CTCF.p2:3:0.797
chr5	142128291	142128405	reg1006567.p1	12.037	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-50777	-	M74028 NM_033136 AK312301	-62323	-	M60516 NM_000800	-62729	-	TSC_hg19_v1_chr5_+_142149971 BC068555	21624	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	21960	+	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	654475	-	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##M74028|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033136|FGF1|2246|fibroblast growth factor 1 (acidic)##AK312301|FGF1|2246|fibroblast growth factor 1 (acidic)##M60516|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.337991	CTCF.p2:-17:0.338
chr6	96314725	96314858	reg1008558.p1	12.037	+	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	-289390	+	TSC_hg19_v1_chr6_-_96025325 BC047582	-289502	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	-2185608	-	NM_006581 AK314966 TSC_hg19_v1_chr6_+_96463867 BC001879 BC036101 AB023021	149076	+	TSC_hg19_v1_chr6_+_96969716 NM_015323 BC015377 AK307651 BC036379 BC028608	654908	+	TSC_hg19_v1_chr6_+_96969734 AB018319 CU690338	654948	+	NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##NM_015323|UFL1|23376|UFM1-specific ligase 1##BC015377|UFL1|23376|UFM1-specific ligase 1##AK307651|UFL1|23376|UFM1-specific ligase 1##BC036379|UFL1|23376|UFM1-specific ligase 1##BC028608|UFL1|23376|UFM1-specific ligase 1##AB018319|UFL1|23376|UFM1-specific ligase 1	0.990857	CTCF.p2:9:0.991
chr19	6517009	6517139	reg1006516.p1	12.036	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-14757	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-35291	-	NM_139161 NM_174881 AK292956 AF503290 AY358684 BC018409 AK000653	-52790	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	13952	+	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	73958	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	74032	-	EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##NM_139161|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_174881|CRB3|92359|crumbs homolog 3 (Drosophila)##AK292956|CRB3|92359|crumbs homolog 3 (Drosophila)##AF503290|CRB3|92359|crumbs homolog 3 (Drosophila)##AY358684|CRB3|92359|crumbs homolog 3 (Drosophila)##BC018409|CRB3|92359|crumbs homolog 3 (Drosophila)##AK000653|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule	0.998802	CTCF.p2:-10:0.999
chr7	89252469	89252609	reg1008378.p1	12.035	+	BC028365 NM_152706	-827509	-	BC140826 BC140829 AK056672 AY295769 NM_181646	-863823	+	BC020600 AF423422 AF423423 AK026806 AK307644 TSC_hg19_v1_chr7_-_87936207 NM_001205315 NM_001205316 NM_024636	-1316325	-	NM_012449 TSC_hg19_v1_chr7_+_89783782 AK308452 BC011802	531198	+	AK304076 TSC_hg19_v1_chr7_+_89783791 AF186249	531273	+	AF455138 NM_001244944 NM_001244945 NM_152999 AK092666 AX747660 TSC_hg19_v1_chr7_+_89841171 AY008443 AY008444 AY008445 NM_001040665 NM_001244946 AK315043	588576	+	BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62##BC140826|ZNF804B|219578|zinc finger protein 804B##BC140829|ZNF804B|219578|zinc finger protein 804B##AK056672|ZNF804B|219578|zinc finger protein 804B##AY295769|ZNF804B|219578|zinc finger protein 804B##NM_181646|ZNF804B|219578|zinc finger protein 804B##BC020600|STEAP4|79689|STEAP family member 4##AF423422|STEAP4|79689|STEAP family member 4##AF423423|STEAP4|79689|STEAP family member 4##AK026806|STEAP4|79689|STEAP family member 4##AK307644|STEAP4|79689|STEAP family member 4##NM_001205315|STEAP4|79689|STEAP family member 4##NM_001205316|STEAP4|79689|STEAP family member 4##NM_024636|STEAP4|79689|STEAP family member 4##NM_012449|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK308452|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC011802|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK304076|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF186249|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF455138|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244944|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244945|STEAP2|261729|STEAP family member 2, metalloreductase##NM_152999|STEAP2|261729|STEAP family member 2, metalloreductase##AK092666|STEAP2|261729|STEAP family member 2, metalloreductase##AY008443|STEAP2|261729|STEAP family member 2, metalloreductase##AY008444|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040665|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244946|STEAP2|261729|STEAP family member 2, metalloreductase##AK315043|STEAP2|261729|STEAP family member 2, metalloreductase	0.987605	CTCF.p2:12:0.988
chr10	109574648	109574793	reg1008093.p1	12.034	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-650344	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-1115661	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-3173675	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	2108489	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	2108557	-	NM_019903 AB209810 BC057285	2191061	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.474201	CTCF.p2:20:0.474
chr19	16293644	16293760	reg1006932.p1	12.034	+	AB050868 BC069320 BC069428 BC069524 NM_054113 HQ258101 BC112200 BC113591	-9392	-	TSC_hg19_v1_chr19_+_16254533 AK027792 AK131222 AK300027 AK298682 AK307563 BC016826	-39200	+	TSC_hg19_v1_chr19_-_16250705 AK095221	-42998	-	TSC_hg19_v1_chr19_+_16296220 AK312058 BC000639 AL050157 NM_014077 BC017286 AF151902 AM393549 AM393669	2530	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	15048	+	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	141939	+	AB050868|CIB3|117286|calcium and integrin binding family member 3##BC069320|CIB3|117286|calcium and integrin binding family member 3##BC069428|CIB3|117286|calcium and integrin binding family member 3##BC069524|CIB3|117286|calcium and integrin binding family member 3##NM_054113|CIB3|117286|calcium and integrin binding family member 3##HQ258101|CIB3|117286|calcium and integrin binding family member 3##BC112200|CIB3|117286|calcium and integrin binding family member 3##BC113591|CIB3|117286|calcium and integrin binding family member 3##AK027792|HSH2D|84941|hematopoietic SH2 domain containing##AK131222|HSH2D|84941|hematopoietic SH2 domain containing##AK300027|HSH2D|84941|hematopoietic SH2 domain containing##AK298682|HSH2D|84941|hematopoietic SH2 domain containing##AK307563|HSH2D|84941|hematopoietic SH2 domain containing##BC016826|HSH2D|84941|hematopoietic SH2 domain containing##AK312058|FAM32A|26017|family with sequence similarity 32, member A##BC000639|FAM32A|26017|family with sequence similarity 32, member A##AL050157|FAM32A|26017|family with sequence similarity 32, member A##NM_014077|FAM32A|26017|family with sequence similarity 32, member A##BC017286|FAM32A|26017|family with sequence similarity 32, member A##AF151902|FAM32A|26017|family with sequence similarity 32, member A##AM393549|FAM32A|26017|family with sequence similarity 32, member A##AM393669|FAM32A|26017|family with sequence similarity 32, member A##AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)	0.998021	CTCF.p2:15:0.998
chr19	1767552	1767669	reg1007488.p1	12.034	+	NM_001080488 TSC_hg19_v1_chr19_+_1753823	-13858	+	M31222 NM_003200 TSC_hg19_v1_chr19_-_1652346	-115271	-	AB385055 BC110579 BC110580 M31523 NM_001136139	-117345	-	TSC_hg19_v1_chr19_+_1776120 AK074606	8577	+	AY302538 NM_001178002 TSC_hg19_v1_chr19_-_1812276 BC035162 NM_138813 AK125225 AK125969	44627	-	AB384122 TSC_hg19_v1_chr19_-_1848439 AB032964 BC016923	80791	-	NM_001080488|ONECUT3|390874|one cut homeobox 3##M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##BC110580|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##M31523|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_001136139|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##AY302538|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001178002|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##BC035162|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_138813|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125225|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125969|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AB032964|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC016923|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	0.999639	CTCF.p2:13:1.000
chr6	116853286	116853393	reg1007326.p1	12.034	+	AK300309 AY358252 NM_153036 BC057769 AK056801	-3131	+	BC032556 NM_153711 AK094140 AK315572	-20518	+	NM_001010919	-70784	+	NM_001139444	13433	-	AK290727 TSC_hg19_v1_chr6_+_116892562	39206	+	TSC_hg19_v1_chr6_+_116892580 NM_001007464 NM_015952 NM_016104	39263	+	AK300309|FAM26D|221301|family with sequence similarity 26, member D##AY358252|FAM26D|221301|family with sequence similarity 26, member D##NM_153036|FAM26D|221301|family with sequence similarity 26, member D##BC057769|FAM26D|221301|family with sequence similarity 26, member D##AK056801|FAM26D|221301|family with sequence similarity 26, member D##BC032556|FAM26E|254228|family with sequence similarity 26, member E##NM_153711|FAM26E|254228|family with sequence similarity 26, member E##AK094140|FAM26E|254228|family with sequence similarity 26, member E##AK315572|FAM26E|254228|family with sequence similarity 26, member E##NM_001010919|FAM26F|441168|family with sequence similarity 26, member F##NM_001139444|BET3L|100128327|BET3 like (S. cerevisiae)##AK290727|RWDD1|51389|RWD domain containing 1##NM_001007464|RWDD1|51389|RWD domain containing 1##NM_015952|RWDD1|51389|RWD domain containing 1##NM_016104|RWDD1|51389|RWD domain containing 1	0.998271	CTCF.p2:16:0.998
chr8	126131463	126131587	reg1006170.p3	12.034	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-27428	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-27468	-	TSC_hg19_v1_chr8_-_126104024 AK296970	-27503	-	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	311054	+	TSC_hg19_v1_chr8_-_126963395 BX648371	831888	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	1439030	-	NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##AK296970|KIAA0196|9897|KIAA0196##BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B	0.0	
chr17	45918680	45918813	reg1008428.p1	12.033	+	TSC_hg19_v1_chr17_-_45918640 BC002980 AK303835 NM_001145023 NM_138355	-77	-	TSC_hg19_v1_chr17_-_45918622 AK290646 BC017317 BC010408 AK308989	-151	-	AK315665 NM_033413 AK292765 AK027206 BC010412	-9701	+	TSC_hg19_v1_chr17_-_45928530 AK127707	9798	-	BC103951 BC103952 BC103953 BC103954 AK127850 NM_199262	14442	-	TSC_hg19_v1_chr17_-_45973143 AK127217	54404	-	BC002980|SCRN2|90507|secernin 2##AK303835|SCRN2|90507|secernin 2##NM_001145023|SCRN2|90507|secernin 2##NM_138355|SCRN2|90507|secernin 2##AK290646|SCRN2|90507|secernin 2##BC017317|SCRN2|90507|secernin 2##BC010408|SCRN2|90507|secernin 2##AK308989|SCRN2|90507|secernin 2##AK315665|LRRC46|90506|leucine rich repeat containing 46##NM_033413|LRRC46|90506|leucine rich repeat containing 46##AK292765|LRRC46|90506|leucine rich repeat containing 46##AK027206|LRRC46|90506|leucine rich repeat containing 46##BC010412|LRRC46|90506|leucine rich repeat containing 46##AK127707|SP6|80320|Sp6 transcription factor##BC103951|SP6|80320|Sp6 transcription factor##BC103952|SP6|80320|Sp6 transcription factor##BC103953|SP6|80320|Sp6 transcription factor##BC103954|SP6|80320|Sp6 transcription factor##AK127850|SP6|80320|Sp6 transcription factor##NM_199262|SP6|80320|Sp6 transcription factor	0.304886	CTCF.p2:-14:0.305
chr9	140016092	140016217	reg1006209.p1	12.033	+	NM_013379 TSC_hg19_v1_chr9_-_140009194	-6960	-	AK292112 TSC_hg19_v1_chr9_-_140009178	-6979	-	BC011907 BC016961 DQ891460 DQ894637 TSC_hg19_v1_chr9_-_140009169	-6985	-	TSC_hg19_v1_chr9_-_140024189 BC018639	8081	-	TSC_hg19_v1_chr9_+_140032795 L13266	16653	+	TSC_hg19_v1_chr9_+_140033607 NM_000832 NM_001185090 NM_001185091 NM_007327 NM_021569 AB208999 D13515 AB208918 L05666 AB590080 L13268	17624	+	NM_013379|DPP7|29952|dipeptidyl-peptidase 7##AK292112|DPP7|29952|dipeptidyl-peptidase 7##BC011907|DPP7|29952|dipeptidyl-peptidase 7##BC016961|DPP7|29952|dipeptidyl-peptidase 7##DQ891460|DPP7|29952|dipeptidyl-peptidase 7##DQ894637|DPP7|29952|dipeptidyl-peptidase 7##L13266|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_000832|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_001185090|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_001185091|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_007327|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_021569|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##AB208999|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##D13515|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##AB208918|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##L05666|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##L13268|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1	0.694153	CTCF.p2:-23:0.694
chr12	129266976	129267100	reg1006825.p2	12.032	+	NM_001136103	-515091	+	NM_052907	-3455877	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-3716970	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	41405	-	BC043528 TSC_hg19_v1_chr12_+_129337985	70946	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	71049	+	NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.424879	CTCF.p2:-3:0.425
chr2	197978062	197978209	reg1005096.p1	12.032	+	AB128038 AB527353 TSC_hg19_v1_chr2_-_197791382 BX648642 AK022439 NM_024989 BC040517	-186691	-	BC137150 BC137151 AY358249 NM_213608	-303198	-	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	-313722	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	197247	-	TSC_hg19_v1_chr2_-_198175459 BC063622	197338	-	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	197384	-	AB128038|PGAP1|80055|post-GPI attachment to proteins 1##BX648642|PGAP1|80055|post-GPI attachment to proteins 1##AK022439|PGAP1|80055|post-GPI attachment to proteins 1##NM_024989|PGAP1|80055|post-GPI attachment to proteins 1##BC040517|PGAP1|80055|post-GPI attachment to proteins 1##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK124039|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44	0.04564	
chr2	234160104	234160228	reg1006240.p2	12.032	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-235050	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-235107	+	BC069151 BC107053 NM_005383	-262785	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	100	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	157	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	191	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.279615	CTCF.p2:2:0.280
chr7	102090829	102090965	reg1009011.p1	12.032	+	TSC_hg19_v1_chr7_+_102074021 AK056497 AK027639 AK300574	-16856	+	TSC_hg19_v1_chr7_+_102073995 NM_001126340 NM_032831	-16920	+	NM_024653 TSC_hg19_v1_chr7_+_102036839 AK023964 BC014298 DQ893168 DQ896466 AK294664	-54055	+	TSC_hg19_v1_chr7_-_102105305 CU678220 BC002820 BC017096	14336	-	AK000020 TSC_hg19_v1_chr7_-_102105307 AK026097 AK222689 NM_017621	14420	-	TSC_hg19_v1_chr7_+_102105430 AL133057 BC030547 NM_152892 AK290967 AK313771	14511	+	AK056497|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK027639|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK300574|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_001126340|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_032831|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_024653|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK023964|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##BC014298|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ893168|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ896466|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK294664|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##BC002820|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##BC017096|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK000020|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK026097|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK222689|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##NM_017621|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AL133057|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##BC030547|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##NM_152892|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK290967|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK313771|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1	0.976808	CTCF.p2:16:0.977
chr12	25113287	25113430	reg1009421.p1	12.031	+	TSC_hg19_v1_chr12_-_25102303 AK056255 NM_001178091 NM_001178092 NM_005504	-11022	-	TSC_hg19_v1_chr12_-_25102021 BX647122 AK128527	-11338	-	TSC_hg19_v1_chr12_-_25101988 AK299088	-11402	-	BC035880 NM_001101339 BC046192 BC062789	37054	-	NM_001204126 NM_001204127 NM_006152	91822	+	TSC_hg19_v1_chr12_+_25205520 BC029391 AK303103 AK303256 BC126417 BC144164 BC144165 BC144170	92222	+	AK056255|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178091|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178092|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_005504|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BX647122|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK128527|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK299088|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BC035880|C12orf77|196415|chromosome 12 open reading frame 77##NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77##BC046192|C12orf77|196415|chromosome 12 open reading frame 77##BC062789|C12orf77|196415|chromosome 12 open reading frame 77##NM_001204126|LRMP|4033|lymphoid-restricted membrane protein##NM_001204127|LRMP|4033|lymphoid-restricted membrane protein##NM_006152|LRMP|4033|lymphoid-restricted membrane protein##BC029391|LRMP|4033|lymphoid-restricted membrane protein##AK303103|LRMP|4033|lymphoid-restricted membrane protein##AK303256|LRMP|4033|lymphoid-restricted membrane protein##BC126417|LRMP|4033|lymphoid-restricted membrane protein##BC144164|LRMP|4033|lymphoid-restricted membrane protein##BC144165|LRMP|4033|lymphoid-restricted membrane protein##BC144170|LRMP|4033|lymphoid-restricted membrane protein	0.347505	CTCF.p2:0:0.348
chr13	61005377	61005484	reg1006776.p2	12.031	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-33951	+	BX537910 NM_001146071 NM_030794	-34840	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-267329	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	983823	-	AK289924 NM_022843	984224	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	6799074	-	EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9	0.071068	
chr2	178197186	178197311	reg1008006.p1	12.031	+	AK314816 NM_006164	-67390	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	-67872	-	AK311688 NM_001145412 NM_001145413	-68677	-	TSC_hg19_v1_chr2_-_178257411 BC093095 AL833088 AK126517	60159	-	AK309714 TSC_hg19_v1_chr2_+_178257487 NM_003659	60181	+	TSC_hg19_v1_chr2_+_178257497 AK225439 AK314259 Y09443 BC141820 AY544121 AK296239 AK316240	60381	+	AK314816|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_006164|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##AL833088|LOC100130691|100130691|uncharacterized LOC100130691##AK126517|LOC100130691|100130691|uncharacterized LOC100130691##AK309714|AGPS|8540|alkylglycerone phosphate synthase##NM_003659|AGPS|8540|alkylglycerone phosphate synthase##AK314259|AGPS|8540|alkylglycerone phosphate synthase##Y09443|AGPS|8540|alkylglycerone phosphate synthase##BC141820|AGPS|8540|alkylglycerone phosphate synthase##AY544121|AGPS|8540|alkylglycerone phosphate synthase##AK296239|AGPS|8540|alkylglycerone phosphate synthase##AK316240|AGPS|8540|alkylglycerone phosphate synthase	0.628244	CTCF.p2:10:0.628
chr11	44933002	44933111	reg1007096.p1	12.030	+	NM_130783	-147081	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-345829	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-345891	+	TSC_hg19_v1_chr11_-_44956087 AF010315	23051	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	39361	-	AF275818 NM_020229	182507	+	NM_130783|TSPAN18|90139|tetraspanin 18##AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11	0.999794	CTCF.p2:6:1.000
chr12	55466014	55466131	reg1002846.p1	12.030	+	NM_021191 AK314136	-52302	+	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	-87570	-	BC132732 BC132734 NM_001098815	-90451	-	BC136988 NM_001005243	57436	+	AB529271 NM_001005280	148736	+	BC140754 NM_001005490	174954	+	NM_021191|NEUROD4|58158|neurogenic differentiation 4##AK314136|NEUROD4|58158|neurogenic differentiation 4##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7##BC140754|OR6C74|254783|olfactory receptor, family 6, subfamily C, member 74##NM_001005490|OR6C74|254783|olfactory receptor, family 6, subfamily C, member 74	1.700254	CTCF.p2:10:1.000	CTCF.p2:-54:0.701
chr13	24495661	24495813	reg1007221.p1	12.030	+	NM_001007537 CU691876 BC137004 BC137006 BC144450	-24579	-	NM_001135816 BC142999	-32145	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	-32223	-	BX648445 TSC_hg19_v1_chr13_+_24553892	58128	+	TSC_hg19_v1_chr13_+_24553943 BX648244 BC043582	58196	+	TSC_hg19_v1_chr13_+_24734858 AK092754 AX747708 NM_001166271 NM_153023 AK055770	239158	+	NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##BX648244|SPATA13|221178|spermatogenesis associated 13##AK092754|SPATA13|221178|spermatogenesis associated 13##NM_001166271|SPATA13|221178|spermatogenesis associated 13##NM_153023|SPATA13|221178|spermatogenesis associated 13##AK055770|SPATA13|221178|spermatogenesis associated 13	0.994247	CTCF.p2:-34:0.994
chr11	125218791	125218900	reg1007792.p1	12.029	+	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	-184219	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	-184267	+	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	-237376	-	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	147296	-	TSC_hg19_v1_chr11_+_125439294 NM_001007277 NM_004879	220450	+	TSC_hg19_v1_chr11_+_125439332 AB209820	220480	+	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_001007277|EI24|9538|etoposide induced 2.4 mRNA##NM_004879|EI24|9538|etoposide induced 2.4 mRNA##AB209820|EI24|9538|etoposide induced 2.4 mRNA	0.396512	CTCF.p2:-9:0.397
chr1	37789471	37789591	reg1005899.p1	12.028	+	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	-289756	-	NM_000760 NM_156039 NM_172313	-840617	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-841047	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	150566	+	TSC_hg19_v1_chr1_+_37940140 AK026884	150619	+	FJ695517 TSC_hg19_v1_chr1_+_37940180 AK093343 AX748065 BC005001	150656	+	AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A##FJ695517|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK093343|ZC3H12A|80149|zinc finger CCCH-type containing 12A##BC005001|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.998327	CTCF.p2:36:0.998
chr6	3742749	3742873	reg1006772.p1	12.028	+	TSC_hg19_v1_chr6_-_3720312 BC031944	-22501	-	BC040876 NM_015482	-286048	-	TSC_hg19_v1_chr6_-_3456513 AL110245	-286297	-	NM_183373 TSC_hg19_v1_chr6_-_3752248	9435	-	BC001261 NM_012135 Y18503	106815	+	TSC_hg19_v1_chr6_+_4021647 BC034969 NM_003913 AK291244 AB011108 AF283465 AB385345 AY029347	278778	+	BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##NM_183373|PXDC1|221749|PX domain containing 1##BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B##BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	0.998201	CTCF.p2:-10:0.998
chr9	1009220	1009346	reg1006930.p2	12.027	+	AF193873 TSC_hg19_v1_chr9_+_977425	-31878	+	NM_021240 BC113584 BC117245	-32318	+	AF130728 AY442914 AY442915 NM_021951 AK313594 AJ276801 AL162131 BC040847 EU446468 AB463577 CU691924	-167520	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	41061	+	TSC_hg19_v1_chr9_+_1050370 Y19052	41087	+	AF130729 NM_181872	41326	+	AF193873|DMRT3|58524|doublesex and mab-3 related transcription factor 3##NM_021240|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC113584|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC117245|DMRT3|58524|doublesex and mab-3 related transcription factor 3##AF130728|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442914|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442915|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021951|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AK313594|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AJ276801|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AL162131|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BC040847|DMRT1|1761|doublesex and mab-3 related transcription factor 1##EU446468|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2	0.997628	CTCF.p2:-1:0.998
chr7	100302982	100303123	reg1008935.p1	12.026	+	NM_022574	-16183	-	TSC_hg19_v1_chr7_+_100273776 M36429 AB528576 CU679597 AF501883 CR541729	-29220	+	M16538 TSC_hg19_v1_chr7_+_100271486 AK291592	-31558	+	TSC_hg19_v1_chr7_+_100303755 NM_005837 BC001430 U94316	668	+	NM_000799 X02157 BC093628 BC111937 BC143225 AB463610 JN849371	15460	+	AF332975 AF332976 AF332977 AF332978 AF332979 AF332980 NM_003386 NM_173059	28196	+	NM_022574|GIGYF1|64599|GRB10 interacting GYF protein 1##M36429|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##AF501883|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##CR541729|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##M16538|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##AK291592|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##NM_005837|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##BC001430|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##U94316|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##NM_000799|EPO|2056|erythropoietin##X02157|EPO|2056|erythropoietin##BC093628|EPO|2056|erythropoietin##BC111937|EPO|2056|erythropoietin##BC143225|EPO|2056|erythropoietin##JN849371|EPO|2056|erythropoietin##AF332975|ZAN|7455|zonadhesin##AF332976|ZAN|7455|zonadhesin##AF332977|ZAN|7455|zonadhesin##AF332978|ZAN|7455|zonadhesin##AF332979|ZAN|7455|zonadhesin##AF332980|ZAN|7455|zonadhesin##NM_003386|ZAN|7455|zonadhesin##NM_173059|ZAN|7455|zonadhesin	0.996849	CTCF.p2:-1:0.997
chr11	66446083	66446203	reg1006809.p2	12.025	+	TSC_hg19_v1_chr11_-_66445331 BC003503	-786	-	AK095158 BC004951 NM_031492 TSC_hg19_v1_chr11_-_66445302	-882	-	BC000307 BC064960 TSC_hg19_v1_chr11_+_66406199 U89505	-39948	+	AB464240 BC139788 AB008567 NM_006946	42647	-	TSC_hg19_v1_chr11_+_66512221 BC028240 NM_024650	66058	+	TSC_hg19_v1_chr11_+_66512242 AK302025	66157	+	BC003503|RBM4B|83759|RNA binding motif protein 4B##AK095158|RBM4B|83759|RNA binding motif protein 4B##BC004951|RBM4B|83759|RNA binding motif protein 4B##NM_031492|RBM4B|83759|RNA binding motif protein 4B##BC000307|RBM4|5936|RNA binding motif protein 4##BC064960|RBM4|5936|RNA binding motif protein 4##U89505|RBM4|5936|RNA binding motif protein 4##BC139788|SPTBN2|6712|spectrin, beta, non-erythrocytic 2##AB008567|SPTBN2|6712|spectrin, beta, non-erythrocytic 2##NM_006946|SPTBN2|6712|spectrin, beta, non-erythrocytic 2##BC028240|C11orf80|79703|chromosome 11 open reading frame 80##NM_024650|C11orf80|79703|chromosome 11 open reading frame 80##AK302025|C11orf80|79703|chromosome 11 open reading frame 80	0.226559	CTCF.p2:11:0.227
chr1	33520848	33520969	reg1006098.p1	12.025	+	TSC_hg19_v1_chr1_-_33502485 NM_001199199 NM_001625 NM_013411	-18408	-	AB005622 TSC_hg19_v1_chr1_-_33502470	-18433	-	TSC_hg19_v1_chr1_-_33502465 AB005621	-18442	-	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	25825	+	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	126740	-	TSC_hg19_v1_chr1_+_33722167 NM_152493	201257	+	NM_001199199|AK2|204|adenylate kinase 2##NM_001625|AK2|204|adenylate kinase 2##NM_013411|AK2|204|adenylate kinase 2##AB005622|AK2|204|adenylate kinase 2##AB005621|AK2|204|adenylate kinase 2##BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##NM_152493|ZNF362|149076|zinc finger protein 362	1.018529	CTCF.p2:7:0.994
chr17	40873137	40873304	reg1006928.p1	12.025	+	TSC_hg19_v1_chr17_+_40834578 NM_003632 U87223 BC171797 AB384696	-38512	+	AF208237 AY429103 EU832758 GQ129298 AF215981 BC098132 BC098157 BC098304 BC099840 NM_016602	-39378	-	TSC_hg19_v1_chr17_-_40829013 BC016062 AK024672 AB208939 BC052978 NM_024927	-44407	-	TSC_hg19_v1_chr17_-_40897056 BC015882 AK299887 AK295853 AK304835 AK309121 AK310399 AK311237 AL833159 AK295626 NM_001991	23858	-	BC034924 TSC_hg19_v1_chr17_-_40913104 BC001607 BC041021	39854	-	AK057121 TSC_hg19_v1_chr17_-_40913137	39917	-	NM_003632|CNTNAP1|8506|contactin associated protein 1##U87223|CNTNAP1|8506|contactin associated protein 1##BC171797|CNTNAP1|8506|contactin associated protein 1##AF208237|CCR10|2826|chemokine (C-C motif) receptor 10##AY429103|CCR10|2826|chemokine (C-C motif) receptor 10##EU832758|CCR10|2826|chemokine (C-C motif) receptor 10##GQ129298|CCR10|2826|chemokine (C-C motif) receptor 10##AF215981|CCR10|2826|chemokine (C-C motif) receptor 10##BC098132|CCR10|2826|chemokine (C-C motif) receptor 10##BC098157|CCR10|2826|chemokine (C-C motif) receptor 10##BC098304|CCR10|2826|chemokine (C-C motif) receptor 10##BC099840|CCR10|2826|chemokine (C-C motif) receptor 10##NM_016602|CCR10|2826|chemokine (C-C motif) receptor 10##BC016062|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AK024672|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AB208939|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##BC052978|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##NM_024927|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##BC015882|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK299887|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK295853|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK304835|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK309121|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK310399|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK311237|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AL833159|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK295626|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##NM_001991|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##BC034924|LOC100190938|100190938|uncharacterized LOC100190938##BC001607|LOC100190938|100190938|uncharacterized LOC100190938##BC041021|LOC100190938|100190938|uncharacterized LOC100190938##AK057121|LOC100190938|100190938|uncharacterized LOC100190938	0.79062	CTCF.p2:-3:0.791
chr4	122924653	122924778	reg1008232.p1	12.024	+	AY865574 NM_001130698	-51807	-	AB255423 AB255424 BC093682 BC093684 BC143239 NM_003305	-70486	-	AB528453 CU689486 DQ890888 DQ896810 BC032691 AF521643 AF521644 AK001577 AK309803 AK308076 NM_018190 NM_176824	-133156	-	DQ335469 NM_015312	167042	+	CR936613 TSC_hg19_v1_chr4_+_123161129	236409	+	NM_139243 AK057303	375428	+	AY865574|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##NM_001130698|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##AB255423|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##AB255424|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##BC093682|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##BC093684|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##BC143239|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##NM_003305|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##DQ890888|BBS7|55212|Bardet-Biedl syndrome 7##DQ896810|BBS7|55212|Bardet-Biedl syndrome 7##BC032691|BBS7|55212|Bardet-Biedl syndrome 7##AF521643|BBS7|55212|Bardet-Biedl syndrome 7##AF521644|BBS7|55212|Bardet-Biedl syndrome 7##AK001577|BBS7|55212|Bardet-Biedl syndrome 7##AK309803|BBS7|55212|Bardet-Biedl syndrome 7##AK308076|BBS7|55212|Bardet-Biedl syndrome 7##NM_018190|BBS7|55212|Bardet-Biedl syndrome 7##NM_176824|BBS7|55212|Bardet-Biedl syndrome 7##DQ335469|KIAA1109|84162|KIAA1109##NM_015312|KIAA1109|84162|KIAA1109##CR936613|KIAA1109|84162|KIAA1109##NM_139243|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK057303|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)	0.284311	CTCF.p2:5:0.284
chr6	16169254	16169399	reg1008421.p1	12.024	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-26016	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-39889	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	-40024	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	69525	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	592371	-	NM_001190766	933162	+	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236	0.820544	CTCF.p2:12:0.821
chr1	24137392	24137519	reg1007219.p1	12.023	+	TSC_hg19_v1_chr1_-_24127245 BC056880 BC001273 BC050685 AK096127 AK307354 AK057302 NM_001008216	-10213	-	L41668 TSC_hg19_v1_chr1_-_24127069 NM_000403	-10463	-	AK314397 TSC_hg19_v1_chr1_-_24126033 NM_001127621	-11410	-	TSC_hg19_v1_chr1_-_24151929 BC021145 BT009792 CR456884 CU679747 DQ892083 DQ895276 L07033 BC010570 AK309129 AK300733 AK313869	14432	-	TSC_hg19_v1_chr1_-_24151934 NM_000191 NM_001166059	14493	-	CU675950 TSC_hg19_v1_chr1_-_24194781 M29877 AB074175 AK092914 AK095443 AK095455 AK225468 AK301302 AK310143 AK314649 AX747804 BC017338 AK295535 NM_000147	57354	-	BC056880|GALE|2582|UDP-galactose-4-epimerase##BC001273|GALE|2582|UDP-galactose-4-epimerase##BC050685|GALE|2582|UDP-galactose-4-epimerase##AK096127|GALE|2582|UDP-galactose-4-epimerase##AK307354|GALE|2582|UDP-galactose-4-epimerase##AK057302|GALE|2582|UDP-galactose-4-epimerase##NM_001008216|GALE|2582|UDP-galactose-4-epimerase##L41668|GALE|2582|UDP-galactose-4-epimerase##NM_000403|GALE|2582|UDP-galactose-4-epimerase##AK314397|GALE|2582|UDP-galactose-4-epimerase##NM_001127621|GALE|2582|UDP-galactose-4-epimerase##BC021145|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##BT009792|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##CR456884|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##DQ892083|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##DQ895276|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##L07033|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##BC010570|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##AK309129|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##AK300733|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##AK313869|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_000191|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_001166059|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##M29877|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AB074175|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK092914|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095443|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095455|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK225468|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK301302|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK310143|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK314649|FUCA1|2517|fucosidase, alpha-L- 1, tissue##BC017338|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK295535|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000147|FUCA1|2517|fucosidase, alpha-L- 1, tissue	0.570367	CTCF.p2:-9:0.570
chr17	28348831	28348978	reg1008455.p1	12.023	+	NM_198529 BX648689 BC137519	-80200	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	-91771	-	AK302745 AK303060 NM_001145053 AK299608	-92008	+	TSC_hg19_v1_chr17_+_28443846 AK297102 AL136806 NM_032141 AK094552 BC062425 AK313963 BC105044 BC105046 BC143417 BC143539 BC046116 BC040118 AF161358 BC016313 AB462988 AM392705 AM392719 CR533555	94937	+	NM_001045	214049	-	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	270055	-	NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AK297102|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AL136806|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_032141|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK094552|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC062425|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK313963|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105044|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105046|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143417|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143539|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC046116|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC040118|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AF161358|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC016313|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392705|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392719|NSRP1|84081|nuclear speckle splicing regulatory protein 1##CR533555|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_001045|SLC6A4|6532|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase	0.290519	CTCF.p2:11:0.291
chr10	101372097	101372233	reg1008691.p1	12.022	+	NM_145285 BC025788 AK313485 AK300856	-79452	+	AK301916 AB587385 AY513279 M37400 AF052153 BC000498 AK312684 TSC_hg19_v1_chr10_-_101190382 AK293483 AK309174 NM_002079	-181799	-	TSC_hg19_v1_chr10_+_101089114 AK308618	-283039	+	TSC_hg19_v1_chr10_-_101380086 AF327403 AJ303078 AF327402 AJ303077 BC058937	7942	-	BC076399 TSC_hg19_v1_chr10_-_101380197 BC047312	8015	-	TSC_hg19_v1_chr10_-_101380229 NM_031212	8058	-	NM_145285|NKX2-3|159296|NK2 homeobox 3##BC025788|NKX2-3|159296|NK2 homeobox 3##AK313485|NKX2-3|159296|NK2 homeobox 3##AK300856|NKX2-3|159296|NK2 homeobox 3##AK301916|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AY513279|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##M37400|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AF052153|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##BC000498|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK312684|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK293483|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK309174|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##NM_002079|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK308618|CNNM1|26507|cyclin M1##AF327403|SLC25A28|81894|solute carrier family 25, member 28##AJ303078|SLC25A28|81894|solute carrier family 25, member 28##AF327402|SLC25A28|81894|solute carrier family 25, member 28##AJ303077|SLC25A28|81894|solute carrier family 25, member 28##BC058937|SLC25A28|81894|solute carrier family 25, member 28##BC076399|SLC25A28|81894|solute carrier family 25, member 28##BC047312|SLC25A28|81894|solute carrier family 25, member 28##NM_031212|SLC25A28|81894|solute carrier family 25, member 28	0.993629	CTCF.p2:19:0.994
chr11	102483803	102483934	reg1006428.p1	12.021	+	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	-82409	-	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-160255	-	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-265840	+	AB527354 NM_004771 Y12779	12187	-	AB527320 AF195192 AY358752 NM_022122	92587	-	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	111785	-	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	0.0	
chr16	87811610	87811735	reg1002888.p2	12.021	+	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	-12102	-	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	-12157	-	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	-174962	+	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	91403	-	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	158475	-	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	173496	+	BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##BC001044|KLHDC4|54758|kelch domain containing 4##DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3##DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein	0.988045	CTCF.p2:-8:0.988
chr5	139069752	139069870	reg1005888.p2	12.021	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	-9419	+	AF151029 TSC_hg19_v1_chr5_+_139060229	-9599	+	BC002490 TSC_hg19_v1_chr5_+_139060088 AB463548 GQ379202 AK314420	-9727	+	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	105595	+	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	352917	-	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	353034	-	DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##BC002490|CXXC5|51523|CXXC finger protein 5##GQ379202|CXXC5|51523|CXXC finger protein 5##AK314420|CXXC5|51523|CXXC finger protein 5##AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2	0.082611	
chr5	60463388	60463520	reg1008808.p1	12.021	+	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	-5187	-	BC146876 BC146881 BC014242 BC047489 TSC_hg19_v1_chr5_-_60458209	-5276	-	TSC_hg19_v1_chr5_+_60241003 AK026051 NM_174889 AF087990 AK291296 BC001753 BC070357 BC033965 AB183433	-222442	+	TSC_hg19_v1_chr5_+_60628085 NM_020928	164644	+	AK094862 NM_173667	470181	+	TSC_hg19_v1_chr5_+_61601970 NM_001098511 NM_001243952 NM_001243953 NM_004520	1138519	+	BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##BC146876|C5orf43|643155|chromosome 5 open reading frame 43##BC146881|C5orf43|643155|chromosome 5 open reading frame 43##BC014242|C5orf43|643155|chromosome 5 open reading frame 43##BC047489|C5orf43|643155|chromosome 5 open reading frame 43##AK026051|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_174889|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AF087990|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AK291296|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC001753|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC070357|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC033965|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AB183433|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6##AK094862|C5orf64|285668|chromosome 5 open reading frame 64##NM_173667|C5orf64|285668|chromosome 5 open reading frame 64##NM_001098511|KIF2A|3796|kinesin heavy chain member 2A##NM_001243952|KIF2A|3796|kinesin heavy chain member 2A##NM_001243953|KIF2A|3796|kinesin heavy chain member 2A##NM_004520|KIF2A|3796|kinesin heavy chain member 2A	0.653239	CTCF.p2:-12:0.653
chr1	17386283	17386415	reg1008832.p1	12.020	+	DQ403007 TSC_hg19_v1_chr1_-_17380528 AK312056 U17248 BC007840 NM_003000	-5774	-	AL354615 AY461712 TSC_hg19_v1_chr1_-_17338424 BC030267 AK290210 NM_001141973 NM_001141974 NM_022089	-47966	-	AK301655 NM_001135247 NM_017459	-78273	-	AB587350 AB023211 AB030176 BC009701 TSC_hg19_v1_chr1_-_17445947 AK295783 NM_007365	59558	-	AK314644 AK026652 AK225541 NM_013358 AB033768 BC130574 BC136402 HQ258487	145316	+	AB026831 NM_016233 BC109091 BC041592 BC109092	189250	+	DQ403007|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AK312056|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##U17248|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##BC007840|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##NM_003000|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AL354615|ATP13A2|23400|ATPase type 13A2##AY461712|ATP13A2|23400|ATPase type 13A2##BC030267|ATP13A2|23400|ATPase type 13A2##AK290210|ATP13A2|23400|ATPase type 13A2##NM_001141973|ATP13A2|23400|ATPase type 13A2##NM_001141974|ATP13A2|23400|ATPase type 13A2##NM_022089|ATP13A2|23400|ATPase type 13A2##AK301655|MFAP2|4237|microfibrillar-associated protein 2##NM_001135247|MFAP2|4237|microfibrillar-associated protein 2##NM_017459|MFAP2|4237|microfibrillar-associated protein 2##AB023211|PADI2|11240|peptidyl arginine deiminase, type II##AB030176|PADI2|11240|peptidyl arginine deiminase, type II##BC009701|PADI2|11240|peptidyl arginine deiminase, type II##AK295783|PADI2|11240|peptidyl arginine deiminase, type II##NM_007365|PADI2|11240|peptidyl arginine deiminase, type II##AK314644|PADI1|29943|peptidyl arginine deiminase, type I##AK026652|PADI1|29943|peptidyl arginine deiminase, type I##AK225541|PADI1|29943|peptidyl arginine deiminase, type I##NM_013358|PADI1|29943|peptidyl arginine deiminase, type I##AB033768|PADI1|29943|peptidyl arginine deiminase, type I##BC130574|PADI1|29943|peptidyl arginine deiminase, type I##BC136402|PADI1|29943|peptidyl arginine deiminase, type I##HQ258487|PADI1|29943|peptidyl arginine deiminase, type I##AB026831|PADI3|51702|peptidyl arginine deiminase, type III##NM_016233|PADI3|51702|peptidyl arginine deiminase, type III##BC109091|PADI3|51702|peptidyl arginine deiminase, type III##BC041592|PADI3|51702|peptidyl arginine deiminase, type III##BC109092|PADI3|51702|peptidyl arginine deiminase, type III	0.01031	
chr13	53024804	53024962	reg1005580.p1	12.018	+	TSC_hg19_v1_chr13_-_53024744 AF151903 BC050439 BC037279 AK289740 NM_016075	-116	-	AK096289 NM_018676 NM_199263	-44255	-	AB044385 TSC_hg19_v1_chr13_-_52980275 BC063842 AK298974 AK315087 AY358149	-44605	-	NM_001098525 NM_018204 TSC_hg19_v1_chr13_+_53029573 AY062261 AY062262 AK022982 Y15758	4670	+	EF560732 TSC_hg19_v1_chr13_+_53029614 BC105806 BC066920 BC130296 BC136332 EU832808 GQ129239 HQ258356	4769	+	TSC_hg19_v1_chr13_+_53035247 AL136848	10410	+	AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##AK096289|THSD1|55901|thrombospondin, type I, domain containing 1##NM_018676|THSD1|55901|thrombospondin, type I, domain containing 1##NM_199263|THSD1|55901|thrombospondin, type I, domain containing 1##AB044385|THSD1|55901|thrombospondin, type I, domain containing 1##BC063842|THSD1|55901|thrombospondin, type I, domain containing 1##AK298974|THSD1|55901|thrombospondin, type I, domain containing 1##AK315087|THSD1|55901|thrombospondin, type I, domain containing 1##AY358149|THSD1|55901|thrombospondin, type I, domain containing 1##NM_001098525|CKAP2|26586|cytoskeleton associated protein 2##NM_018204|CKAP2|26586|cytoskeleton associated protein 2##AY062261|CKAP2|26586|cytoskeleton associated protein 2##AY062262|CKAP2|26586|cytoskeleton associated protein 2##AK022982|CKAP2|26586|cytoskeleton associated protein 2##Y15758|CKAP2|26586|cytoskeleton associated protein 2##EF560732|CKAP2|26586|cytoskeleton associated protein 2##BC105806|CKAP2|26586|cytoskeleton associated protein 2##BC066920|CKAP2|26586|cytoskeleton associated protein 2##BC130296|CKAP2|26586|cytoskeleton associated protein 2##BC136332|CKAP2|26586|cytoskeleton associated protein 2##EU832808|CKAP2|26586|cytoskeleton associated protein 2##GQ129239|CKAP2|26586|cytoskeleton associated protein 2##HQ258356|CKAP2|26586|cytoskeleton associated protein 2##AL136848|CKAP2|26586|cytoskeleton associated protein 2	1.861914	CTCF.p2:35:0.992	CTCF.p2:-85:0.870
chr15	63695116	63695242	reg1008787.p1	12.018	+	AK315769 NM_001218 NM_206925 TSC_hg19_v1_chr15_-_63674076	-21104	-	BT006656 DQ893188 DQ896511 EU831616 EU831623 EU831703 EU831708 AF051882 BC000278 AF037335 BC011691 TSC_hg19_v1_chr15_-_63674046 AK096845 BC023981	-21187	-	NM_001145646 NM_031301 TSC_hg19_v1_chr15_+_63569803 AK291204 AL136671 BC020905 AB189172 AB197122 AF508794 AX776001 AY358698 AB528062 AM392724 AM392878 DQ891401 CU676772 AK307725	-125366	+	TSC_hg19_v1_chr15_+_63796791 AK314223	101603	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	101698	+	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	194400	+	AK315769|CA12|771|carbonic anhydrase XII##NM_001218|CA12|771|carbonic anhydrase XII##NM_206925|CA12|771|carbonic anhydrase XII##BT006656|CA12|771|carbonic anhydrase XII##DQ893188|CA12|771|carbonic anhydrase XII##DQ896511|CA12|771|carbonic anhydrase XII##EU831616|CA12|771|carbonic anhydrase XII##EU831623|CA12|771|carbonic anhydrase XII##EU831703|CA12|771|carbonic anhydrase XII##EU831708|CA12|771|carbonic anhydrase XII##AF051882|CA12|771|carbonic anhydrase XII##BC000278|CA12|771|carbonic anhydrase XII##AF037335|CA12|771|carbonic anhydrase XII##BC011691|CA12|771|carbonic anhydrase XII##AK096845|CA12|771|carbonic anhydrase XII##BC023981|CA12|771|carbonic anhydrase XII##NM_001145646|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##NM_031301|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK291204|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AL136671|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##BC020905|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB189172|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB197122|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AF508794|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AY358698|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392724|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392878|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##DQ891401|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK307725|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK314223|USP3|9960|ubiquitin specific peptidase 3##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22	0.865573	CTCF.p2:11:0.866
chr1	68582466	68582591	reg1008594.p1	12.018	+	BC005362 U96750 NM_004675	-66143	-	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	-283418	-	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	-284540	+	TSC_hg19_v1_chr1_-_68698207 BC137109 BC137113 BC110826 AB097018 AK074984 AK301613 BX648748 BX538320 NM_001002292 NM_001193334 AK074583 AK309779 DQ323735 AY359035 NM_024911	115629	-	AK289925 BC075035 BC075036 NM_000329 U18991	333108	-	CU688044 BC065304 BC011743 BC035506 BC041580 TSC_hg19_v1_chr1_-_68962723	380173	-	BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK124028|LOC100289178|100289178|uncharacterized LOC100289178##BC137109|WLS|79971|wntless homolog (Drosophila)##BC137113|WLS|79971|wntless homolog (Drosophila)##BC110826|WLS|79971|wntless homolog (Drosophila)##AB097018|WLS|79971|wntless homolog (Drosophila)##AK074984|WLS|79971|wntless homolog (Drosophila)##AK301613|WLS|79971|wntless homolog (Drosophila)##BX648748|WLS|79971|wntless homolog (Drosophila)##BX538320|WLS|79971|wntless homolog (Drosophila)##NM_001002292|WLS|79971|wntless homolog (Drosophila)##NM_001193334|WLS|79971|wntless homolog (Drosophila)##AK074583|WLS|79971|wntless homolog (Drosophila)##AK309779|WLS|79971|wntless homolog (Drosophila)##DQ323735|WLS|79971|wntless homolog (Drosophila)##AY359035|WLS|79971|wntless homolog (Drosophila)##NM_024911|WLS|79971|wntless homolog (Drosophila)##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC065304|DEPDC1|55635|DEP domain containing 1##BC011743|DEPDC1|55635|DEP domain containing 1##BC035506|DEPDC1|55635|DEP domain containing 1##BC041580|DEPDC1|55635|DEP domain containing 1	0.999955	CTCF.p2:-4:1.000
chrX	13506395	13506512	reg1005341.p1	12.018	+	TSC_hg19_v1_chrX_-_13397507 D28370	-108948	-	AK302365 NM_001135995	-167936	-	AB050195 TSC_hg19_v1_chrX_-_13338140 BC137186 BC137187	-168315	-	NM_001167890 NM_015507 AK075214 AK300236 AJ245671 AF193055 AF186084 AK300137 AK315018 AY358333 BC038587 AL117610 CU691592 DQ890938	81383	+	AK291271 AK315599 NM_152634 AK294465	164813	+	TSC_hg19_v1_chrX_+_13707246 NM_001195328 NM_004251	200788	+	AK302365|ATXN3L|92552|ataxin 3-like##NM_001135995|ATXN3L|92552|ataxin 3-like##AB050195|ATXN3L|92552|ataxin 3-like##BC137186|ATXN3L|92552|ataxin 3-like##BC137187|ATXN3L|92552|ataxin 3-like##NM_001167890|EGFL6|25975|EGF-like-domain, multiple 6##NM_015507|EGFL6|25975|EGF-like-domain, multiple 6##AK075214|EGFL6|25975|EGF-like-domain, multiple 6##AK300236|EGFL6|25975|EGF-like-domain, multiple 6##AJ245671|EGFL6|25975|EGF-like-domain, multiple 6##AF193055|EGFL6|25975|EGF-like-domain, multiple 6##AF186084|EGFL6|25975|EGF-like-domain, multiple 6##AK300137|EGFL6|25975|EGF-like-domain, multiple 6##AK315018|EGFL6|25975|EGF-like-domain, multiple 6##AY358333|EGFL6|25975|EGF-like-domain, multiple 6##BC038587|EGFL6|25975|EGF-like-domain, multiple 6##AL117610|EGFL6|25975|EGF-like-domain, multiple 6##DQ890938|EGFL6|25975|EGF-like-domain, multiple 6##AK291271|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK315599|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##NM_152634|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK294465|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##NM_001195328|RAB9A|9367|RAB9A, member RAS oncogene family##NM_004251|RAB9A|9367|RAB9A, member RAS oncogene family	0.980069	CTCF.p2:38:0.980
chr12	1227285	1227418	reg1007910.p1	12.017	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-126899	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-168525	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-210269	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	476000	-	AY009399 NM_030775	498870	+	BC001749 NM_032642	511060	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.658399	CTCF.p2:-14:0.658
chrX	129213898	129214012	reg1007527.p1	12.017	+	NM_021946 TSC_hg19_v1_chrX_+_129139243 AK074089	-74749	+	TSC_hg19_v1_chrX_+_129040144 NM_001166221 NM_006649 AK291918 AK298578 BC009649 BC001149 AK304563 BC014987 AF039694 AB590128 CU679427 DQ892549 DQ895760	-173824	+	TSC_hg19_v1_chrX_-_128977856 AL161962 AK096967 AF151847 AY358558 BC006200 BC012826 BC003128 AK001112 AY952881 NM_016032	-236127	-	TSC_hg19_v1_chrX_-_129244438 U32645	30489	-	TSC_hg19_v1_chrX_-_129244474 NM_001421	30523	-	BC017194 AK314972 NM_001127197 TSC_hg19_v1_chrX_-_129244713	30732	-	NM_021946|BCORL1|63035|BCL6 corepressor-like 1##AK074089|BCORL1|63035|BCL6 corepressor-like 1##NM_001166221|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_006649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK291918|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK298578|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC009649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC001149|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK304563|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC014987|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ892549|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ895760|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9##U32645|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001421|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##BC017194|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##AK314972|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001127197|ELF4|2000|E74-like factor 4 (ets domain transcription factor)	0.995252	CTCF.p2:-1:0.995
chr15	47488316	47488428	reg1007922.p1	12.016	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	-11985	+	TSC_hg19_v1_chr15_+_45927245 AK222463 AF042284 NM_021199 AF151802 AK313111 BC016836	-1561123	+	TSC_hg19_v1_chr15_+_45879759 AK128626	-1608599	+	TSC_hg19_v1_chr15_+_48009541 AK290032	521216	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	522313	+	AF348468 NM_205850 BC110836 BC113628 BC113630 BC143950 DQ665306 DQ665307 HQ258279	924832	+	AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK222463|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF042284|SQRDL|58472|sulfide quinone reductase-like (yeast)##NM_021199|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF151802|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK313111|SQRDL|58472|sulfide quinone reductase-like (yeast)##BC016836|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK128626|PLDN|26258|pallidin homolog (mouse)##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF348468|SLC24A5|283652|solute carrier family 24, member 5##NM_205850|SLC24A5|283652|solute carrier family 24, member 5##BC113628|SLC24A5|283652|solute carrier family 24, member 5##BC113630|SLC24A5|283652|solute carrier family 24, member 5##BC143950|SLC24A5|283652|solute carrier family 24, member 5##DQ665306|SLC24A5|283652|solute carrier family 24, member 5##DQ665307|SLC24A5|283652|solute carrier family 24, member 5##HQ258279|SLC24A5|283652|solute carrier family 24, member 5	0.998352	CTCF.p2:-2:0.998
chr22	37562686	37562811	reg1007966.p1	12.016	+	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	-16796	-	CR456446 TSC_hg19_v1_chr22_-_37505748	-57070	-	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	-63173	-	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	21543	-	BC042068 NM_001051 AK291165	45635	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	77473	-	BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##CR456446|TMPRSS6|164656|transmembrane protease, serine 6##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)	0.999907	CTCF.p2:-6:1.000
chr6	166298486	166298608	reg1006708.p1	12.016	+	AY203946 TSC_hg19_v1_chr6_-_166076051	-222495	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	-222851	-	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	-575455	-	TSC_hg19_v1_chr6_-_166401424 AK289375	102886	-	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	102987	-	BC098425 NM_003181	283582	-	AY203946|LOC100132188|100132188|LP7097##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AK289375|LINC00473|90632|long intergenic non-protein coding RNA 473##BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)	0.997288	CTCF.p2:-14:0.997
chr7	155589791	155589873	reg1008239.p1	12.016	+	TSC_hg19_v1_chr7_+_155437354 AK307515	-152464	+	TSC_hg19_v1_chr7_+_155437182 NM_053043	-152624	+	TSC_hg19_v1_chr7_+_155437147 BC011923	-152681	+	AY927450 AY927452 AY927453 AY927454 AY927455 TSC_hg19_v1_chr7_-_155601833	11966	-	AB464234 TSC_hg19_v1_chr7_-_155604951 L38518 NM_000193	15058	-	AF063598 TSC_hg19_v1_chr7_-_156433234 BC050364 BC058889 BC031037 BC070228 AK056371 AF439977	843399	-	AK307515|RBM33|155435|RNA binding motif protein 33##NM_053043|RBM33|155435|RNA binding motif protein 33##BC011923|RBM33|155435|RNA binding motif protein 33##AY927450|SHH|6469|sonic hedgehog##L38518|SHH|6469|sonic hedgehog##NM_000193|SHH|6469|sonic hedgehog##AF063598|C7orf13|129790|chromosome 7 open reading frame 13##BC050364|C7orf13|129790|chromosome 7 open reading frame 13##BC031037|C7orf13|129790|chromosome 7 open reading frame 13##BC070228|C7orf13|129790|chromosome 7 open reading frame 13##AK056371|C7orf13|129790|chromosome 7 open reading frame 13##AF439977|C7orf13|129790|chromosome 7 open reading frame 13	0.998316	CTCF.p2:-2:0.998
chr10	133619462	133619605	reg1008187.p1	12.015	+	BC042951 NM_174937 TSC_hg19_v1_chr10_-_133110013	-509532	-	TSC_hg19_v1_chr10_-_133109808 BC093639 BC101535	-509713	-	TSC_hg19_v1_chr10_+_131934681 AJ010841 AB463691	-1684818	+	CU692440 AB528671 U15174 BC009342 BC080643 TSC_hg19_v1_chr10_-_133795428 AK222626 AK295136 BC021989 AF002697 NM_004052	175843	-	TSC_hg19_v1_chr10_-_133795461 BC067818	175936	-	NM_001105521	298779	+	BC042951|TCERG1L|256536|transcription elongation regulator 1-like##NM_174937|TCERG1L|256536|transcription elongation regulator 1-like##BC093639|TCERG1L|256536|transcription elongation regulator 1-like##BC101535|TCERG1L|256536|transcription elongation regulator 1-like##AJ010841|GLRX3|10539|glutaredoxin 3##U15174|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC009342|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC080643|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK222626|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK295136|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC021989|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AF002697|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_004052|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC067818|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_001105521|JAKMIP3|282973|Janus kinase and microtubule interacting protein 3	0.998449	CTCF.p2:6:0.998
chr11	71524911	71525047	reg1008597.p1	12.015	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	-73	-	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	-26372	+	BC130498 BC130502 AB126080 NM_001005405	-231065	-	AF529416 NM_001002035	19266	+	NM_001242853	64519	+	NM_018320	114788	+	BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene##NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1##BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11##AF529416|DEFB108B|245911|defensin, beta 108B##NM_001002035|DEFB108B|245911|defensin, beta 108B##NM_001242853|LOC100129216|100129216|beta-defensin 131-like##NM_018320|RNF121|55298|ring finger protein 121	0.992615	CTCF.p2:-10:0.977
chr7	139703832	139703972	reg1008388.p1	12.015	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	-174810	+	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	-225863	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	-225997	-	AL137255 TSC_hg19_v1_chr7_-_139762712 BC044660	58709	-	BC081541 NM_022750	59618	-	TSC_hg19_v1_chr7_-_139876751 AB528281 AK131497 NM_030647	172960	-	NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##AL137255|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##BC044660|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##BC081541|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##NM_022750|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##AK131497|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)##NM_030647|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)	0.929841	CTCF.p2:5:0.930
chr7	36710570	36710688	reg1006816.p1	12.015	+	BC028678 NM_001100425	-280915	-	TSC_hg19_v1_chr7_+_36429470 BC070066 NM_018685 AK299803 AK291254 AF273437	-281189	+	TSC_hg19_v1_chr7_-_36406811 BC056191 AB384038 BC136362 BC144032 AB020702 BC110422 NM_001199707 AK293912 AK294686 AK302559 NM_001199706 NM_015314 NM_001199708	-303957	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	53447	-	BC064635 NM_001039459	314061	-	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	315091	-	BC028678|KIAA0895|23366|KIAA0895##NM_001100425|KIAA0895|23366|KIAA0895##BC070066|ANLN|54443|anillin, actin binding protein##NM_018685|ANLN|54443|anillin, actin binding protein##AK299803|ANLN|54443|anillin, actin binding protein##AK291254|ANLN|54443|anillin, actin binding protein##AF273437|ANLN|54443|anillin, actin binding protein##BC056191|KIAA0895|23366|KIAA0895##BC136362|KIAA0895|23366|KIAA0895##BC144032|KIAA0895|23366|KIAA0895##AB020702|KIAA0895|23366|KIAA0895##BC110422|KIAA0895|23366|KIAA0895##NM_001199707|KIAA0895|23366|KIAA0895##AK293912|KIAA0895|23366|KIAA0895##AK294686|KIAA0895|23366|KIAA0895##AK302559|KIAA0895|23366|KIAA0895##NM_001199706|KIAA0895|23366|KIAA0895##NM_015314|KIAA0895|23366|KIAA0895##NM_001199708|KIAA0895|23366|KIAA0895##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1	0.65225	CTCF.p2:-5:0.652
chr13	96276343	96276463	reg1006884.p1	12.014	+	TSC_hg19_v1_chr13_+_96204946 NM_006984 BC010920 U89916 AK315737 DQ892831 DQ896077 CR456845	-71429	+	NM_001160100 NM_182848 AK055855	-190549	+	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	-322691	-	AB385415 AF272347 AF272348 TSC_hg19_v1_chr13_-_96294398	17940	-	BC011450 AB023213 TSC_hg19_v1_chr13_-_96296961 BC041804 NM_014934 NM_198968	20537	-	AK292947 NM_006260 TSC_hg19_v1_chr13_+_96329392	52991	+	NM_006984|CLDN10|9071|claudin 10##BC010920|CLDN10|9071|claudin 10##U89916|CLDN10|9071|claudin 10##AK315737|CLDN10|9071|claudin 10##DQ892831|CLDN10|9071|claudin 10##DQ896077|CLDN10|9071|claudin 10##CR456845|CLDN10|9071|claudin 10##NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF272347|DZIP1|22873|DAZ interacting protein 1##AF272348|DZIP1|22873|DAZ interacting protein 1##BC011450|DZIP1|22873|DAZ interacting protein 1##AB023213|DZIP1|22873|DAZ interacting protein 1##BC041804|DZIP1|22873|DAZ interacting protein 1##NM_014934|DZIP1|22873|DAZ interacting protein 1##NM_198968|DZIP1|22873|DAZ interacting protein 1##AK292947|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##NM_006260|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3	0.591975	CTCF.p2:-21:0.565
chr7	47219950	47220058	reg1006379.p2	12.014	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-1259198	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-1286870	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-1291899	+	TSC_hg19_v1_chr7_-_47579207 BC071791	359205	-	TSC_hg19_v1_chr7_-_47621681 CR749644	401659	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	401779	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	1.025691	CTCF.p2:-7:0.998
chr10	77796211	77796327	reg1008221.p1	12.012	+	AF267860 NM_032024	-253751	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-634704	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-634788	-	AF118141 TSC_hg19_v1_chr10_-_79397246	1600956	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	1601067	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	1601137	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.935916	CTCF.p2:4:0.936
chr5	77304314	77304430	reg1007395.p1	12.012	+	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	-232240	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	-369858	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	-369943	-	BC113045 CU691576 DQ894915 EU176289 TSC_hg19_v1_chr5_-_77590458 AK225908 U91931	286053	-	TSC_hg19_v1_chr5_-_77590488 AY623424 AK303300	286105	-	TSC_hg19_v1_chr5_-_77590495 U81504	286120	-	BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##EU446696|OTP|23440|orthopedia homeobox##DQ894915|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##EU176289|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK225908|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U91931|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AY623424|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK303300|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U81504|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit	0.884835	CTCF.p2:9:0.885
chr1	177917629	177917736	reg1004535.p2	12.010	+	AB051534 AB161694 BC028036 NM_021165	-777101	+	AK296524 TSC_hg19_v1_chr1_+_177140093	-777604	+	TSC_hg19_v1_chr1_-_177134042 AK309094	-783607	-	AB063357 NM_033127 TSC_hg19_v1_chr1_-_177939202	21444	-	BC009106 TSC_hg19_v1_chr1_-_177939393	21688	-	TSC_hg19_v1_chr1_-_178007060 AK092831 BX538051 AB067515	89417	-	AB051534|FAM5B|57795|family with sequence similarity 5, member B##AB161694|FAM5B|57795|family with sequence similarity 5, member B##BC028036|FAM5B|57795|family with sequence similarity 5, member B##NM_021165|FAM5B|57795|family with sequence similarity 5, member B##AK296524|FAM5B|57795|family with sequence similarity 5, member B##AK309094|ASTN1|460|astrotactin 1##AB063357|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##NM_033127|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##BC009106|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AK092831|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##BX538051|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene	0.978678	CTCF.p2:2:0.979
chr13	39848221	39848356	reg1008024.p1	12.010	+	TSC_hg19_v1_chr13_+_39612534 AL833329 NM_001012754 NM_001017370 BX648122 BC052492 BC140877 BC140878 CR749318 AK300260 AK299198 BX647872	-235753	+	TSC_hg19_v1_chr13_-_39612251 NM_025138 NM_170719	-236035	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	-236087	-	AF098807 BC017824 TSC_hg19_v1_chr13_-_40177268	328956	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	329039	-	NM_005780 TSC_hg19_v1_chr13_-_40177356	329074	-	AL833329|NHLRC3|387921|NHL repeat containing 3##NM_001012754|NHLRC3|387921|NHL repeat containing 3##NM_001017370|NHLRC3|387921|NHL repeat containing 3##BX648122|NHLRC3|387921|NHL repeat containing 3##BC052492|NHLRC3|387921|NHL repeat containing 3##BC140877|NHLRC3|387921|NHL repeat containing 3##BC140878|NHLRC3|387921|NHL repeat containing 3##CR749318|NHLRC3|387921|NHL repeat containing 3##AK300260|NHLRC3|387921|NHL repeat containing 3##AK299198|NHLRC3|387921|NHL repeat containing 3##BX647872|NHLRC3|387921|NHL repeat containing 3##NM_025138|PROSER1|80209|proline and serine rich 1##NM_170719|PROSER1|80209|proline and serine rich 1##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1##AF098807|LHFP|10186|lipoma HMGIC fusion partner##BC017824|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##NM_005780|LHFP|10186|lipoma HMGIC fusion partner	0.037916	
chr6	10951925	10952064	reg1008845.p1	12.010	+	AK128130 NM_001040274	-64931	+	AF091149 BC069603 AF079550 BC117316 BC117318 NM_004752	-69915	-	AK314408 AB593146 AK097831 AK310329 TSC_hg19_v1_chr6_-_10838761 BC033002 NM_001242385 NM_001242957 NM_005906	-113245	-	TSC_hg19_v1_chr6_-_11044539 AK000341 BC060809 BC050278 NM_017770	92586	-	TSC_hg19_v1_chr6_+_11094066 AK058186	142063	+	BC032356 NM_001135575 TSC_hg19_v1_chr6_+_11094342	142309	+	AK128130|SYCP2L|221711|synaptonemal complex protein 2-like##NM_001040274|SYCP2L|221711|synaptonemal complex protein 2-like##AF091149|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC069603|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AF079550|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117316|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117318|GCM2|9247|glial cells missing homolog 2 (Drosophila)##NM_004752|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AK314408|MAK|4117|male germ cell-associated kinase##AB593146|MAK|4117|male germ cell-associated kinase##AK097831|MAK|4117|male germ cell-associated kinase##AK310329|MAK|4117|male germ cell-associated kinase##BC033002|MAK|4117|male germ cell-associated kinase##NM_001242385|MAK|4117|male germ cell-associated kinase##NM_001242957|MAK|4117|male germ cell-associated kinase##NM_005906|MAK|4117|male germ cell-associated kinase##AK000341|ELOVL2|54898|ELOVL fatty acid elongase 2##BC060809|ELOVL2|54898|ELOVL fatty acid elongase 2##BC050278|ELOVL2|54898|ELOVL fatty acid elongase 2##NM_017770|ELOVL2|54898|ELOVL fatty acid elongase 2##AK058186|C6orf228|221710|chromosome 6 open reading frame 228##BC032356|C6orf228|221710|chromosome 6 open reading frame 228##NM_001135575|C6orf228|221710|chromosome 6 open reading frame 228	0.039445	
chr19	45492567	45492693	reg1008212.p1	12.009	+	TSC_hg19_v1_chr19_+_45458649 BC012359 BT007262 CU680306 DQ892236 DQ895436	-33976	+	NM_001294 BC004865 TSC_hg19_v1_chr19_+_45458636 AK074935 AK223553 AF037339 AK075262	-34010	+	AF113884 TSC_hg19_v1_chr19_+_45452536	-40147	+	TSC_hg19_v1_chr19_+_45504729 M83221 NM_006509 BC028013 AK290594	12112	+	TSC_hg19_v1_chr19_+_45542313 AF042800 NM_007056 AK293333 AY358944 BC013178	49693	+	BC019352 NM_145288	87057	-	BC012359|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##BT007262|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##DQ892236|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##DQ895436|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##NM_001294|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##BC004865|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AK074935|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AK223553|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AF037339|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AK075262|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AF113884|APOC2|344|apolipoprotein C-II##M83221|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##NM_006509|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##BC028013|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##AK290594|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##AF042800|CLASRP|11129|CLK4-associating serine/arginine rich protein##NM_007056|CLASRP|11129|CLK4-associating serine/arginine rich protein##AK293333|CLASRP|11129|CLK4-associating serine/arginine rich protein##AY358944|CLASRP|11129|CLK4-associating serine/arginine rich protein##BC013178|CLASRP|11129|CLK4-associating serine/arginine rich protein##BC019352|ZNF296|162979|zinc finger protein 296##NM_145288|ZNF296|162979|zinc finger protein 296	0.409179	CTCF.p2:-1:0.409
chr2	74135189	74135311	reg1008118.p1	12.009	+	AK311286 TSC_hg19_v1_chr2_+_74120134 AK124338 AK304523 AK310215 AK311011 AK312955 BC012617 X16940	-15113	+	NM_001199893 NM_001615 TSC_hg19_v1_chr2_+_74120106	-15149	+	BC007682 U73522 CU675757 CU688078 DQ892616 DQ895856 EU927390 TSC_hg19_v1_chr2_+_74058055	-77238	+	TSC_hg19_v1_chr2_+_74153968 NM_080916 NM_080918	18700	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	18750	+	TSC_hg19_v1_chr2_+_74154019 X97386	18796	+	AK124338|ACTG2|72|actin, gamma 2, smooth muscle, enteric##AK304523|ACTG2|72|actin, gamma 2, smooth muscle, enteric##AK310215|ACTG2|72|actin, gamma 2, smooth muscle, enteric##AK312955|ACTG2|72|actin, gamma 2, smooth muscle, enteric##BC012617|ACTG2|72|actin, gamma 2, smooth muscle, enteric##X16940|ACTG2|72|actin, gamma 2, smooth muscle, enteric##NM_001199893|ACTG2|72|actin, gamma 2, smooth muscle, enteric##NM_001615|ACTG2|72|actin, gamma 2, smooth muscle, enteric##BC007682|STAMBP|10617|STAM binding protein##U73522|STAMBP|10617|STAM binding protein##DQ892616|STAMBP|10617|STAM binding protein##DQ895856|STAMBP|10617|STAM binding protein##EU927390|STAMBP|10617|STAM binding protein##NM_080916|DGUOK|1716|deoxyguanosine kinase##NM_080918|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##X97386|DGUOK|1716|deoxyguanosine kinase	0.0	
chrX	114990331	114990486	reg1006231.p1	12.009	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-162540	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-193366	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-194802	+	BC003645 TSC_hg19_v1_chrX_-_115085443	95031	-	AK313927 NM_000686 X87723 U16957	311587	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	577359	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:21:0.429
chr1	26602158	26602270	reg1006179.p1	12.008	+	TSC_hg19_v1_chr1_+_26560690 AK024038 AK299312 BC064528 NM_022778	-41559	+	BC144663 BC128138 BC128139 NM_198137	-85130	+	TSC_hg19_v1_chr1_+_26504028 AB590388 DQ892241 DQ895441 CU679980 BT006900	-98183	+	NM_031286	3998	+	BC030135 TSC_hg19_v1_chr1_+_26606522	4270	+	TSC_hg19_v1_chr1_+_26606583 AJ297915	4367	+	AK024038|CEP85|64793|centrosomal protein 85kDa##AK299312|CEP85|64793|centrosomal protein 85kDa##BC064528|CEP85|64793|centrosomal protein 85kDa##NM_022778|CEP85|64793|centrosomal protein 85kDa##BC144663|CATSPER4|378807|cation channel, sperm associated 4##BC128138|CATSPER4|378807|cation channel, sperm associated 4##BC128139|CATSPER4|378807|cation channel, sperm associated 4##NM_198137|CATSPER4|378807|cation channel, sperm associated 4##DQ892241|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##DQ895441|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##BT006900|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##NM_031286|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##BC030135|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AJ297915|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3	0.94759	CTCF.p2:-7:0.948
chr13	33213783	33213905	reg1007084.p1	12.008	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-53161	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-53205	+	TSC_hg19_v1_chr13_+_33160610 AL137201	-53226	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	376679	+	AY082590 BC046563 NM_001243466 NM_178007	546371	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	566320	-	BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.97947	CTCF.p2:1:0.979
chr20	12905918	12906065	reg1007587.p1	12.008	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-1007434	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	-1034542	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-2251422	-	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	83650	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	296432	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	713573	-	AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1	0.946612	CTCF.p2:9:0.947
chr3	108742652	108742772	reg1006287.p1	12.008	+	AF110003 EU832759 GQ129299 AF110002 BC103993 BC103994 AB593147 NM_005459	-70101	-	AK291991 AJ240085 AF161547 NM_016388 BC025713 AJ224878	-201118	+	HQ258043 AM050721 BC113502 BC113528 BC069318 AF290873 AF323084 AY358655 NM_032579 TSC_hg19_v1_chr3_-_108476258	-266567	-	CU690636 BC050307 AK302642 AF084946 BC028680 NM_014429	94238	-	AK026416 TSC_hg19_v1_chr3_+_108855566	112851	+	BC018070 AY283672 NM_138815	292589	-	AF110003|GUCA1C|9626|guanylate cyclase activator 1C##EU832759|GUCA1C|9626|guanylate cyclase activator 1C##GQ129299|GUCA1C|9626|guanylate cyclase activator 1C##AF110002|GUCA1C|9626|guanylate cyclase activator 1C##BC103993|GUCA1C|9626|guanylate cyclase activator 1C##BC103994|GUCA1C|9626|guanylate cyclase activator 1C##AB593147|GUCA1C|9626|guanylate cyclase activator 1C##NM_005459|GUCA1C|9626|guanylate cyclase activator 1C##AK291991|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ240085|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AF161547|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##NM_016388|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##BC025713|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ224878|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##HQ258043|RETNLB|84666|resistin like beta##AM050721|RETNLB|84666|resistin like beta##BC113502|RETNLB|84666|resistin like beta##BC113528|RETNLB|84666|resistin like beta##BC069318|RETNLB|84666|resistin like beta##AF290873|RETNLB|84666|resistin like beta##AF323084|RETNLB|84666|resistin like beta##AY358655|RETNLB|84666|resistin like beta##NM_032579|RETNLB|84666|resistin like beta##BC050307|MORC1|27136|MORC family CW-type zinc finger 1##AK302642|MORC1|27136|MORC family CW-type zinc finger 1##AF084946|MORC1|27136|MORC family CW-type zinc finger 1##BC028680|MORC1|27136|MORC family CW-type zinc finger 1##NM_014429|MORC1|27136|MORC family CW-type zinc finger 1##AK026416|FLJ22763|401081|uncharacterized LOC401081##BC018070|DPPA2|151871|developmental pluripotency associated 2##AY283672|DPPA2|151871|developmental pluripotency associated 2##NM_138815|DPPA2|151871|developmental pluripotency associated 2	0.999021	CTCF.p2:-1:0.999
chr10	112370178	112370311	reg1007126.p1	12.007	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-26129	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-42752	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-112493	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	33885	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	261368	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	261470	+	AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)	0.713177	CTCF.p2:-14:0.713
chr3	187334226	187334360	reg1007971.p1	12.007	+	BC013161 NM_022147 AJ251832 AY562238 DQ891046 DQ894225	-248095	+	BC106945 BC106946 TSC_hg19_v1_chr3_-_187009489 AK291686 AK129893 AK304334 AK300663 BX647237 AK291157 CR749615 BC039724 NM_001031849 NM_001879 NM_139125	-324654	-	BC065202 NM_153708 BC034744 DQ890807 DQ893962 AY562235	-418951	+	BC032625 AK312177 TSC_hg19_v1_chr3_-_187388181 NM_001048	53859	-	BC068081 NM_001004312	86051	-	EU139066 NM_001134738	118388	-	BC013161|RTP4|64108|receptor (chemosensory) transporter protein 4##NM_022147|RTP4|64108|receptor (chemosensory) transporter protein 4##AJ251832|RTP4|64108|receptor (chemosensory) transporter protein 4##AY562238|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ891046|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ894225|RTP4|64108|receptor (chemosensory) transporter protein 4##BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1##NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1##BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1##AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1##BC032625|SST|6750|somatostatin##AK312177|SST|6750|somatostatin##NM_001048|SST|6750|somatostatin##BC068081|RTP2|344892|receptor (chemosensory) transporter protein 2##NM_001004312|RTP2|344892|receptor (chemosensory) transporter protein 2##EU139066|BCL6|604|B-cell CLL/lymphoma 6##NM_001134738|BCL6|604|B-cell CLL/lymphoma 6	0.176236	
chr4	61066909	61067037	reg1008237.p1	12.006	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-3090405	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-3090441	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-3090574	-	TSC_hg19_v1_chr4_+_62066948 AK309793	1000002	+	NM_015236	1295865	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	4208123	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.956218	CTCF.p2:8:0.956
chr9	69381674	69381807	reg1007041.p2	12.005	+	AF265442 BC069006 AK293173 NM_001085457	-119186	-	NM_001085476	-179537	-	TSC_hg19_v1_chr9_+_69065493 AK311167	-316202	+	AL136793 NM_001098805	240	+	NM_001126334	797074	-	NM_001099279 NM_199244	1047990	-	AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.757122	CTCF.p2:-35:0.757
chr1	246852922	246853039	reg1006508.p1	12.004	+	TSC_hg19_v1_chr1_+_246729853 BX647629 AK074142	-123134	+	TSC_hg19_v1_chr1_+_246729803 AK056563 AL834246	-123175	+	TSC_hg19_v1_chr1_+_246729757 BC036200 BC010228	-123235	+	NM_016002	34397	+	TSC_hg19_v1_chr1_+_246887713 AK075178 BC026185 CU693152 AF151807	34677	+	TSC_hg19_v1_chr1_-_247054277 AL833491	201315	-	BX647629|CNST|163882|consortin, connexin sorting protein##AK074142|CNST|163882|consortin, connexin sorting protein##AK056563|CNST|163882|consortin, connexin sorting protein##AL834246|CNST|163882|consortin, connexin sorting protein##BC036200|CNST|163882|consortin, connexin sorting protein##BC010228|CNST|163882|consortin, connexin sorting protein##NM_016002|SCCPDH|51097|saccharopine dehydrogenase (putative)##AK075178|SCCPDH|51097|saccharopine dehydrogenase (putative)##BC026185|SCCPDH|51097|saccharopine dehydrogenase (putative)##AF151807|SCCPDH|51097|saccharopine dehydrogenase (putative)##AL833491|AHCTF1|25909|AT hook containing transcription factor 1	0.975403	CTCF.p2:-4:0.975
chr18	47536292	47536414	reg1007960.p1	12.004	+	TSC_hg19_v1_chr18_-_47376221 BC033527	-160164	-	TSC_hg19_v1_chr18_+_47340396 AK123464	-195962	+	TSC_hg19_v1_chr18_-_47340253 AK054673 NM_006111 AK314462	-196083	-	AB384567 AB032945 TSC_hg19_v1_chr18_-_47721518 AB290160 BC032511 NM_001080467	185019	-	AB527886 BC030606 NM_145020 AK302114	256479	-	AF078830 AF078831 AF078832 AF078833 EF488685 AB527669 NM_001204151	270020	-	BC033527|MYO5B|4645|myosin VB##AK054673|ACAA2|10449|acetyl-CoA acyltransferase 2##NM_006111|ACAA2|10449|acetyl-CoA acyltransferase 2##AK314462|ACAA2|10449|acetyl-CoA acyltransferase 2##AB032945|MYO5B|4645|myosin VB##AB290160|MYO5B|4645|myosin VB##BC032511|MYO5B|4645|myosin VB##NM_001080467|MYO5B|4645|myosin VB##BC030606|CCDC11|220136|coiled-coil domain containing 11##NM_145020|CCDC11|220136|coiled-coil domain containing 11##AK302114|CCDC11|220136|coiled-coil domain containing 11##AF078830|MBD1|4152|methyl-CpG binding domain protein 1##AF078831|MBD1|4152|methyl-CpG binding domain protein 1##AF078832|MBD1|4152|methyl-CpG binding domain protein 1##AF078833|MBD1|4152|methyl-CpG binding domain protein 1##EF488685|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204151|MBD1|4152|methyl-CpG binding domain protein 1	0.990087	CTCF.p2:-11:0.868
chr13	22051270	22051391	reg1008295.p1	12.003	+	TSC_hg19_v1_chr13_-_22033510 BC067898 NM_153251 BC034944	-17823	-	TSC_hg19_v1_chr13_-_22033486 AX721051	-17848	-	CU686599 TSC_hg19_v1_chr13_-_22033417 BC110517 AK295804 BC050367 AK299354	-17940	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	126979	-	TSC_hg19_v1_chr13_-_22178356 NM_152726	127030	-	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	193818	+	BC067898|ZDHHC20|253832|zinc finger, DHHC-type containing 20##NM_153251|ZDHHC20|253832|zinc finger, DHHC-type containing 20##BC034944|ZDHHC20|253832|zinc finger, DHHC-type containing 20##BC110517|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK295804|ZDHHC20|253832|zinc finger, DHHC-type containing 20##BC050367|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK299354|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)	0.859913	CTCF.p2:8:0.860
chr16	86553798	86553922	reg1008593.p1	12.003	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	-9620	+	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	-9704	+	TSC_hg19_v1_chr16_-_86542463 AK091834	-11396	-	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	34912	-	BC113437 BC113439 NM_005251	46996	+	BC100027 NM_005250	58254	+	EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1	0.997555	CTCF.p2:12:0.998
chr1	77999495	77999630	reg1008167.p1	12.003	+	AY171600 BC033896 NM_012093	-251276	+	TSC_hg19_v1_chr1_+_77747727 BC036666 AK090967 AX746708	-251828	+	TSC_hg19_v1_chr1_+_77747603 AF445193 NM_174858	-251931	+	TSC_hg19_v1_chr1_-_78148354 BX641096 BX641096 AK310514 BX641001 BX641001 NM_015534	148793	-	TSC_hg19_v1_chr1_-_78149099 BC035079 BC035079	149636	-	TSC_hg19_v1_chr1_-_78225538 BC016663 AK308402 AB029020 AF383172 AF383173 AK022864 NM_015017 NM_201624 NM_201626	225890	-	AY171600|AK5|26289|adenylate kinase 5##BC033896|AK5|26289|adenylate kinase 5##NM_012093|AK5|26289|adenylate kinase 5##BC036666|AK5|26289|adenylate kinase 5##AK090967|AK5|26289|adenylate kinase 5##AF445193|AK5|26289|adenylate kinase 5##NM_174858|AK5|26289|adenylate kinase 5##BX641096|ZZZ3|26009|zinc finger, ZZ-type containing 3##BX641096|ZZZ3|26009|zinc finger, ZZ-type containing 3##AK310514|ZZZ3|26009|zinc finger, ZZ-type containing 3##BX641001|ZZZ3|26009|zinc finger, ZZ-type containing 3##BX641001|ZZZ3|26009|zinc finger, ZZ-type containing 3##NM_015534|ZZZ3|26009|zinc finger, ZZ-type containing 3##BC035079|ZZZ3|26009|zinc finger, ZZ-type containing 3##BC035079|ZZZ3|26009|zinc finger, ZZ-type containing 3##BC016663|USP33|23032|ubiquitin specific peptidase 33##AK308402|USP33|23032|ubiquitin specific peptidase 33##AB029020|USP33|23032|ubiquitin specific peptidase 33##AF383172|USP33|23032|ubiquitin specific peptidase 33##AF383173|USP33|23032|ubiquitin specific peptidase 33##AK022864|USP33|23032|ubiquitin specific peptidase 33##NM_015017|USP33|23032|ubiquitin specific peptidase 33##NM_201624|USP33|23032|ubiquitin specific peptidase 33##NM_201626|USP33|23032|ubiquitin specific peptidase 33	0.975926	CTCF.p2:4:0.976
chr19	17577182	17577304	reg1006422.p2	12.003	+	BC014127 NM_138454 DQ426894	-5500	-	NM_001190844	-17868	-	TSC_hg19_v1_chr19_+_17530872 BC011840 NM_138401 BC007883	-46344	+	AK294238 TSC_hg19_v1_chr19_+_17579599	2345	+	TSC_hg19_v1_chr19_+_17581292 AK299852 BC059399 NM_198580	4057	+	TSC_hg19_v1_chr19_+_17581338 AK296355 AK315935	4097	+	BC014127|NXNL1|115861|nucleoredoxin-like 1##NM_138454|NXNL1|115861|nucleoredoxin-like 1##DQ426894|NXNL1|115861|nucleoredoxin-like 1##NM_001190844|TMEM221|100130519|transmembrane protein 221##BC011840|FAM125A|93343|family with sequence similarity 125, member A##NM_138401|FAM125A|93343|family with sequence similarity 125, member A##BC007883|FAM125A|93343|family with sequence similarity 125, member A##AK294238|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK299852|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##BC059399|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##NM_198580|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK296355|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK315935|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1	0.957154	CTCF.p2:-2:0.957
chr2	25565386	25565534	reg1006269.p1	12.003	+	TSC_hg19_v1_chr2_-_25565353 AB208833	-97	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	-132	-	AF067972 TSC_hg19_v1_chr2_-_25564801 BC043617 NM_022552	-661	-	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	2	-	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	330941	-	AB385496 TSC_hg19_v1_chr2_-_26101159	535669	-	AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF067972|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC043617|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_022552|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta	0.0	
chr2	138596158	138596296	reg1005639.p1	12.002	+	NM_001080427	-847766	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-1073111	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-1720551	-	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	125707	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	663166	+	TSC_hg19_v1_chr2_+_139259500 AK021919	663263	+	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like	0.99978	CTCF.p2:21:1.000
chr2	148668613	148668746	reg1004218.p1	12.002	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	-66034	+	TSC_hg19_v1_chr2_+_148602300 AK314124	-66344	+	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	-66562	+	TSC_hg19_v1_chr2_-_148778310 AK225092 BC005388 AF022108 AF047598 AF132596 BC014847 AK295721 AK291989 AK294878 AK298862 NM_001190882 NM_001190879 AK299749 NM_002552 NM_001190881 NM_181741	109683	-	TSC_hg19_v1_chr2_+_148778636 NM_018328 EF542797	109930	+	NM_181742	110493	-	BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK225092|ORC4|5000|origin recognition complex, subunit 4##BC005388|ORC4|5000|origin recognition complex, subunit 4##AF022108|ORC4|5000|origin recognition complex, subunit 4##AF047598|ORC4|5000|origin recognition complex, subunit 4##AF132596|ORC4|5000|origin recognition complex, subunit 4##BC014847|ORC4|5000|origin recognition complex, subunit 4##AK295721|ORC4|5000|origin recognition complex, subunit 4##AK291989|ORC4|5000|origin recognition complex, subunit 4##AK294878|ORC4|5000|origin recognition complex, subunit 4##AK298862|ORC4|5000|origin recognition complex, subunit 4##NM_001190882|ORC4|5000|origin recognition complex, subunit 4##NM_001190879|ORC4|5000|origin recognition complex, subunit 4##AK299749|ORC4|5000|origin recognition complex, subunit 4##NM_002552|ORC4|5000|origin recognition complex, subunit 4##NM_001190881|ORC4|5000|origin recognition complex, subunit 4##NM_181741|ORC4|5000|origin recognition complex, subunit 4##NM_018328|MBD5|55777|methyl-CpG binding domain protein 5##EF542797|MBD5|55777|methyl-CpG binding domain protein 5##NM_181742|ORC4|5000|origin recognition complex, subunit 4	0.99605	CTCF.p2:27:0.996
chr2	84250084	84250208	reg1007651.p1	12.002	+	TSC_hg19_v1_chr2_-_80531838 AK225779	-3718303	-	TSC_hg19_v1_chr2_-_80531719 AK290512	-3718421	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	-3718621	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	436224	-	AK296741 TSC_hg19_v1_chr2_-_84686396	436249	-	NM_003849	436439	-	AK225779|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit	0.908768	CTCF.p2:-3:0.909
chr8	29172343	29172475	reg1007098.p2	12.002	+	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-51795	-	TSC_hg19_v1_chr8_+_28748135 AY522342 DQ269478 BC069242 NM_024567	-424282	+	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	-424492	+	AL137704 NM_057158	33912	-	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	35661	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	768065	-	BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AY522342|HMBOX1|79618|homeobox containing 1##DQ269478|HMBOX1|79618|homeobox containing 1##BC069242|HMBOX1|79618|homeobox containing 1##NM_024567|HMBOX1|79618|homeobox containing 1##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66	0.025776	
chr10	126408114	126408285	reg1007250.p2	12.001	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-257778	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-269622	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-300681	-	D50930 TSC_hg19_v1_chr10_-_126432660	24445	-	TSC_hg19_v1_chr10_-_126432823 BC031654	24617	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	24712	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.0	
chr1	14155479	14155596	reg1007736.p1	12.001	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-79596	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-79614	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-79652	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	769657	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	1095182	+	AY505121 NM_001018001	1100758	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.13897	
chr4	83660567	83660715	reg1008306.p1	12.000	+	AK301116 BC147019 BC147027 NM_001080506 AK297512	-177527	-	TSC_hg19_v1_chr4_+_83351969 AB528563 CR457141	-308672	+	TSC_hg19_v1_chr4_+_83351769 AK022656 BC065815 BC001317	-308852	+	TSC_hg19_v1_chr4_-_83719926 BC004936 BC137429 BC137432 AF389338 AK024685 NM_001037582 NM_024906	59348	-	TSC_hg19_v1_chr4_-_83812296 BC084583 AB018358 AB018359 BC031292 AK225934 BC143489 BC117221 BC143491 BC143492	151644	-	AK002161 CR933696 TSC_hg19_v1_chr4_-_83812319	151671	-	AK301116|TMEM150C|441027|transmembrane protein 150C##BC147019|TMEM150C|441027|transmembrane protein 150C##BC147027|TMEM150C|441027|transmembrane protein 150C##NM_001080506|TMEM150C|441027|transmembrane protein 150C##AK297512|TMEM150C|441027|transmembrane protein 150C##CR457141|ENOPH1|58478|enolase-phosphatase 1##AK022656|ENOPH1|58478|enolase-phosphatase 1##BC065815|ENOPH1|58478|enolase-phosphatase 1##BC001317|ENOPH1|58478|enolase-phosphatase 1##BC004936|SCD5|79966|stearoyl-CoA desaturase 5##BC137429|SCD5|79966|stearoyl-CoA desaturase 5##BC137432|SCD5|79966|stearoyl-CoA desaturase 5##AF389338|SCD5|79966|stearoyl-CoA desaturase 5##AK024685|SCD5|79966|stearoyl-CoA desaturase 5##NM_001037582|SCD5|79966|stearoyl-CoA desaturase 5##NM_024906|SCD5|79966|stearoyl-CoA desaturase 5##BC084583|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AB018358|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AB018359|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC031292|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK225934|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143489|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC117221|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143491|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143492|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK002161|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##CR933696|SEC31A|22872|SEC31 homolog A (S. cerevisiae)	0.879899	CTCF.p2:-10:0.880
chr11	46550961	46551100	reg1008474.p1	11.999	+	BC119775 BC119817 AF385590 AF498918 NM_000741 BC095546 BC137535	-142899	-	NM_001012333 TSC_hg19_v1_chr11_+_46403310	-147724	+	TSC_hg19_v1_chr11_+_46403285 X55110	-147743	+	BC045609 NM_017749 AK302808	61912	-	AL834190 TSC_hg19_v1_chr11_-_46615568 AK057896 AK000301 AB051523	64505	-	AK304530 TSC_hg19_v1_chr11_-_46615589	64573	-	BC119775|CHRM4|1132|cholinergic receptor, muscarinic 4##BC119817|CHRM4|1132|cholinergic receptor, muscarinic 4##AF385590|CHRM4|1132|cholinergic receptor, muscarinic 4##AF498918|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_000741|CHRM4|1132|cholinergic receptor, muscarinic 4##BC095546|CHRM4|1132|cholinergic receptor, muscarinic 4##BC137535|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_001012333|MDK|4192|midkine (neurite growth-promoting factor 2)##X55110|MDK|4192|midkine (neurite growth-promoting factor 2)##BC045609|AMBRA1|55626|autophagy/beclin-1 regulator 1##NM_017749|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK302808|AMBRA1|55626|autophagy/beclin-1 regulator 1##AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1##AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1	0.791331	CTCF.p2:3:0.695
chr19	55723935	55724059	reg1008349.p1	11.999	+	TSC_hg19_v1_chr19_-_55720815 BC111715 BC111716 D15049 AK097257 NM_001161440 NM_002842	-3133	-	AK125182 TSC_hg19_v1_chr19_-_55691510 AK313067 BC033683 BC046157 BC029962 NM_003180	-32404	-	TSC_hg19_v1_chr19_-_55690722 AK295337	-33260	-	BC023000 NM_173804	16634	-	TSC_hg19_v1_chr19_-_55767132 AK297152	43129	-	TSC_hg19_v1_chr19_-_55769905 BC094753	45877	-	BC111715|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##BC111716|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##D15049|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##AK097257|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##NM_001161440|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##NM_002842|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##AK125182|SYT5|6861|synaptotagmin V##AK313067|SYT5|6861|synaptotagmin V##BC033683|SYT5|6861|synaptotagmin V##BC046157|SYT5|6861|synaptotagmin V##BC029962|SYT5|6861|synaptotagmin V##NM_003180|SYT5|6861|synaptotagmin V##AK295337|SYT5|6861|synaptotagmin V##BC023000|TMEM86B|255043|transmembrane protein 86B##NM_173804|TMEM86B|255043|transmembrane protein 86B##AK297152|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1##BC094753|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1	0.032744	
chr6	20092397	20092532	reg1005289.p1	11.999	+	TSC_hg19_v1_chr6_+_19838612 AF085889	-253781	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	-254829	+	AK096832 NM_182757 AB076367 BC063311 AL832329	-1704797	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	120208	-	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	309639	+	CR749285 NM_001243076	311569	+	BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3	0.991745	CTCF.p2:-14:0.992
chr9	101538253	101538380	reg1008775.p1	11.999	+	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	-67131	-	TSC_hg19_v1_chr9_-_101018013 NM_018421	-520312	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	-520595	-	CR749467 TSC_hg19_v1_chr9_-_101558801 NM_173551	20335	-	TSC_hg19_v1_chr9_+_101569953 AB527376 AB040673 AB078146 AJ132365 NM_024642	31674	+	TSC_hg19_v1_chr9_+_101706027 AK308438 NM_001855 AK095885 L25286 D21230	167667	+	DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_018421|TBC1D2|55357|TBC1 domain family, member 2##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##CR749467|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##NM_173551|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##AB040673|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AB078146|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AJ132365|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##NM_024642|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AK308438|COL15A1|1306|collagen, type XV, alpha 1##NM_001855|COL15A1|1306|collagen, type XV, alpha 1##AK095885|COL15A1|1306|collagen, type XV, alpha 1##L25286|COL15A1|1306|collagen, type XV, alpha 1##D21230|COL15A1|1306|collagen, type XV, alpha 1	0.999837	CTCF.p2:0:1.000
chr19	47652876	47653013	reg1007231.p1	11.998	+	TSC_hg19_v1_chr19_+_47634184 AB385085 DQ891751 DQ894932 CU676224 AF110956 BT007290	-18722	+	TSC_hg19_v1_chr19_+_47634171 BC003611	-18783	+	TSC_hg19_v1_chr19_+_47634145 AK315624 AF090385 AF046025 AK090645	-18805	+	U82987 BC136481 TSC_hg19_v1_chr19_-_47734457 AF332558 NM_014417	81401	-	AB590880 AK298837 AF354654 AF354655 AF354656 NM_001127240 NM_001127241 NM_001127242	82996	-	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	106817	+	DQ891751|SAE1|10055|SUMO1 activating enzyme subunit 1##DQ894932|SAE1|10055|SUMO1 activating enzyme subunit 1##AF110956|SAE1|10055|SUMO1 activating enzyme subunit 1##BT007290|SAE1|10055|SUMO1 activating enzyme subunit 1##BC003611|SAE1|10055|SUMO1 activating enzyme subunit 1##AK315624|SAE1|10055|SUMO1 activating enzyme subunit 1##AF090385|SAE1|10055|SUMO1 activating enzyme subunit 1##AF046025|SAE1|10055|SUMO1 activating enzyme subunit 1##AK090645|SAE1|10055|SUMO1 activating enzyme subunit 1##U82987|BBC3|27113|BCL2 binding component 3##BC136481|BBC3|27113|BCL2 binding component 3##AF332558|BBC3|27113|BCL2 binding component 3##NM_014417|BBC3|27113|BCL2 binding component 3##AK298837|BBC3|27113|BCL2 binding component 3##AF354654|BBC3|27113|BCL2 binding component 3##AF354655|BBC3|27113|BCL2 binding component 3##AF354656|BBC3|27113|BCL2 binding component 3##NM_001127240|BBC3|27113|BCL2 binding component 3##NM_001127241|BBC3|27113|BCL2 binding component 3##NM_001127242|BBC3|27113|BCL2 binding component 3##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9	0.693274	CTCF.p2:-5:0.693
chr11	728131	728245	reg1006035.p2	11.997	+	AK027765 TSC_hg19_v1_chr11_+_722322	-5886	+	TSC_hg19_v1_chr11_+_706613 BC080636	-21563	+	TSC_hg19_v1_chr11_+_706230 NM_022772 AK025588 AK025824 AK225311 AK294041 AK222903	-22019	+	TSC_hg19_v1_chr11_+_747426 BC010103 BC009680	19237	+	TSC_hg19_v1_chr11_+_747430 L19437 NM_006755	19246	+	TSC_hg19_v1_chr11_+_747461 AK295537 AK313427 AK130060 AB528639 CU679621 BC018847	19278	+	AK027765|EPS8L2|64787|EPS8-like 2##BC080636|EPS8L2|64787|EPS8-like 2##NM_022772|EPS8L2|64787|EPS8-like 2##AK025588|EPS8L2|64787|EPS8-like 2##AK025824|EPS8L2|64787|EPS8-like 2##AK225311|EPS8L2|64787|EPS8-like 2##AK294041|EPS8L2|64787|EPS8-like 2##AK222903|EPS8L2|64787|EPS8-like 2##BC010103|TALDO1|6888|transaldolase 1##BC009680|TALDO1|6888|transaldolase 1##L19437|TALDO1|6888|transaldolase 1##NM_006755|TALDO1|6888|transaldolase 1##AK295537|TALDO1|6888|transaldolase 1##AK313427|TALDO1|6888|transaldolase 1##BC018847|TALDO1|6888|transaldolase 1	0.998918	CTCF.p2:-4:0.999
chr19	12099810	12099918	reg1005594.p2	11.997	+	AK092240 AK299224 AX747424 NM_001012753 BC105711 BC105712 BC105713	-23982	+	TSC_hg19_v1_chr19_+_12035889 AK299182 AK308305 AL136732 NM_144566 BC144406 BC136777	-63946	+	TSC_hg19_v1_chr19_+_11998643 BC051309 NM_021915 EU446913	-101191	+	TSC_hg19_v1_chr19_-_12146492 AK129553 BC047412	46625	-	TSC_hg19_v1_chr19_-_12146530 AK098300 NM_001080411	46677	-	NM_001080404	63917	-	AK092240|ZNF763|284390|zinc finger protein 763##AK299224|ZNF763|284390|zinc finger protein 763##NM_001012753|ZNF763|284390|zinc finger protein 763##BC105711|ZNF763|284390|zinc finger protein 763##BC105712|ZNF763|284390|zinc finger protein 763##BC105713|ZNF763|284390|zinc finger protein 763##AK299182|ZNF763|284390|zinc finger protein 763##AK308305|ZNF700|90592|zinc finger protein 700##AL136732|ZNF700|90592|zinc finger protein 700##NM_144566|ZNF700|90592|zinc finger protein 700##BC144406|ZNF700|90592|zinc finger protein 700##BC136777|ZNF700|90592|zinc finger protein 700##BC051309|ZNF69|7620|zinc finger protein 69##NM_021915|ZNF69|7620|zinc finger protein 69##EU446913|ZNF69|7620|zinc finger protein 69##BC047412|ZNF433|163059|zinc finger protein 433##AK098300|ZNF433|163059|zinc finger protein 433##NM_001080411|ZNF433|163059|zinc finger protein 433##NM_001080404|ZNF878|729747|zinc finger protein 878	0.957177	CTCF.p2:-2:0.957
chr13	33485791	33485902	reg1006254.p2	11.996	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-325163	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-325207	+	TSC_hg19_v1_chr13_+_33160610 AL137201	-325228	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	104677	+	AY082590 BC046563 NM_001243466 NM_178007	274369	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	294318	-	BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.289321	CTCF.p2:1:0.289
chr16	72501184	72501310	reg1008704.p1	11.995	+	AK122925 NM_001160213	-294899	-	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	-295204	-	NM_001142318	-373033	-	TSC_hg19_v1_chr16_+_72699031 AK021563	197817	+	TSC_hg19_v1_chr16_-_72991733 BC029653	490458	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	580974	-	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001142318|TXNL4B|54957|thioredoxin-like 4B##BC029653|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3	0.899688	CTCF.p2:7:0.900
chr7	115898854	115898985	reg1006434.p1	11.995	+	AK310995 NM_152829 AK291802 AF245357	-35900	+	NM_015641 AK299104 TSC_hg19_v1_chr7_+_115850592 BC001451 AK021575 AK300546 AK309324 AK222840 AF245356 AJ250865 AK315644 AB529039 EU176352 EU176694	-48266	+	TSC_hg19_v1_chr7_-_115670864 CR933605 NM_001018058 NM_012252	-228067	-	TSC_hg19_v1_chr7_+_116139705 AY353255 BC005256 NM_001206747 NM_001233 NM_198212 AK310786 AK311964 AF035752 AB451285 AB451417 AB489180 AM393815 BT007051 CR407685	240808	+	NM_001206748	241178	+	NM_001753 AK290871	265921	+	AK310995|TES|26136|testis derived transcript (3 LIM domains)##NM_152829|TES|26136|testis derived transcript (3 LIM domains)##AK291802|TES|26136|testis derived transcript (3 LIM domains)##AF245357|TES|26136|testis derived transcript (3 LIM domains)##NM_015641|TES|26136|testis derived transcript (3 LIM domains)##AK299104|TES|26136|testis derived transcript (3 LIM domains)##BC001451|TES|26136|testis derived transcript (3 LIM domains)##AK021575|TES|26136|testis derived transcript (3 LIM domains)##AK300546|TES|26136|testis derived transcript (3 LIM domains)##AK309324|TES|26136|testis derived transcript (3 LIM domains)##AK222840|TES|26136|testis derived transcript (3 LIM domains)##AF245356|TES|26136|testis derived transcript (3 LIM domains)##AJ250865|TES|26136|testis derived transcript (3 LIM domains)##AK315644|TES|26136|testis derived transcript (3 LIM domains)##EU176352|TES|26136|testis derived transcript (3 LIM domains)##EU176694|TES|26136|testis derived transcript (3 LIM domains)##CR933605|TFEC|22797|transcription factor EC##NM_001018058|TFEC|22797|transcription factor EC##NM_012252|TFEC|22797|transcription factor EC##AY353255|CAV2|858|caveolin 2##BC005256|CAV2|858|caveolin 2##NM_001206747|CAV2|858|caveolin 2##NM_001233|CAV2|858|caveolin 2##NM_198212|CAV2|858|caveolin 2##AK310786|CAV2|858|caveolin 2##AK311964|CAV2|858|caveolin 2##AF035752|CAV2|858|caveolin 2##AB451285|CAV2|858|caveolin 2##AB451417|CAV2|858|caveolin 2##AM393815|CAV2|858|caveolin 2##BT007051|CAV2|858|caveolin 2##CR407685|CAV2|858|caveolin 2##NM_001206748|CAV2|858|caveolin 2##NM_001753|CAV1|857|caveolin 1, caveolae protein, 22kDa##AK290871|CAV1|857|caveolin 1, caveolae protein, 22kDa	0.755329	CTCF.p2:-7:0.755
chr7	44517056	44517171	reg1006700.p1	11.995	+	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	-151822	-	TSC_hg19_v1_chr7_+_44240639 BC007319 AF091079 U95735 DQ890653 DQ893833 CU675611 AB451317 AB451447 BT007078 CR456989 CR542008	-276427	+	TSC_hg19_v1_chr7_+_44240631 AK223488	-276493	+	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	13168	-	AY437865 AY515256 FJ481111 TSC_hg19_v1_chr7_-_44580901 BC117178 BC143731 BC143756 AF192522 AF192523 NM_001101648 NM_013389	63772	-	TSC_hg19_v1_chr7_-_44613508 CR457213 DQ891215 DQ894398 AB385026 AL136700 AK022774 AK309276 BC001235 AK222662 AK315363 AF247666 AJ131712	96418	-	AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC007319|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AF091079|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##U95735|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ890653|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ893833|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451317|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451447|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BT007078|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR456989|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR542008|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK223488|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3##AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##CR457213|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##DQ891215|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##DQ894398|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AL136700|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK022774|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK309276|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##BC001235|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK222662|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK315363|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AF247666|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AJ131712|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56	0.401155	CTCF.p2:13:0.401
chr1	181448413	181448539	reg1005849.p1	11.994	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-390611	+	NM_016545	-390839	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-445326	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	4224	+	BC137223 BC137224 AK128654 NM_001009992	582321	-	TSC_hg19_v1_chr1_-_182354649 AK301600	906206	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.991514	CTCF.p2:-4:0.992
chr1_gl000192_random	511042	511159	reg1007471.p1	11.994	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.031854	
chr3	151901388	151901504	reg1005501.p1	11.994	+	TSC_hg19_v1_chr3_+_151591430 AK290420 NM_033050 BC030948 AF247785	-309993	+	NM_001086 L32179 BC020706 AK290628 BC032309 CU689322	-369542	+	TSC_hg19_v1_chr3_+_151488214 BC014344	-413216	+	NM_021038 NM_207292	84382	+	TSC_hg19_v1_chr3_+_151986753 BC050535 BC043493	85296	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	85899	-	AK290420|SUCNR1|56670|succinate receptor 1##NM_033050|SUCNR1|56670|succinate receptor 1##BC030948|SUCNR1|56670|succinate receptor 1##AF247785|SUCNR1|56670|succinate receptor 1##NM_001086|AADAC|13|arylacetamide deacetylase (esterase)##L32179|AADAC|13|arylacetamide deacetylase (esterase)##BC020706|AADAC|13|arylacetamide deacetylase (esterase)##AK290628|AADAC|13|arylacetamide deacetylase (esterase)##BC032309|AADAC|13|arylacetamide deacetylase (esterase)##BC014344|LOC201651|201651|arylacetamide deacetylase (esterase) pseudogene##NM_021038|MBNL1|4154|muscleblind-like (Drosophila)##NM_207292|MBNL1|4154|muscleblind-like (Drosophila)##BC050535|MBNL1|4154|muscleblind-like (Drosophila)##BC043493|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093	0.982301	CTCF.p2:3:0.982
chr11	67236836	67236956	reg1005727.p2	11.993	+	AK310743 TSC_hg19_v1_chr11_-_67236717 AK296988 AY007143 BC013883 BC051854 BC125134 AK303342 NM_001078650 NM_001078651 NM_025124 AK025402	-195	-	AY039217 NM_145200	-14079	+	AY569571 BC119779 BC122869 NM_206997	-16697	-	NM_003977 TSC_hg19_v1_chr11_+_67250510 U78521	13616	+	TSC_hg19_v1_chr11_+_67250595 BC104797 BC104827 U31913 AB529203 EU446613	13716	+	X98654 TSC_hg19_v1_chr11_-_67271900	34978	-	AK310743|TMEM134|80194|transmembrane protein 134##AK296988|TMEM134|80194|transmembrane protein 134##AY007143|TMEM134|80194|transmembrane protein 134##BC013883|TMEM134|80194|transmembrane protein 134##BC051854|TMEM134|80194|transmembrane protein 134##BC125134|TMEM134|80194|transmembrane protein 134##AK303342|TMEM134|80194|transmembrane protein 134##NM_001078650|TMEM134|80194|transmembrane protein 134##NM_001078651|TMEM134|80194|transmembrane protein 134##NM_025124|TMEM134|80194|transmembrane protein 134##AK025402|TMEM134|80194|transmembrane protein 134##AY039217|CABP4|57010|calcium binding protein 4##NM_145200|CABP4|57010|calcium binding protein 4##AY569571|GPR152|390212|G protein-coupled receptor 152##BC119779|GPR152|390212|G protein-coupled receptor 152##BC122869|GPR152|390212|G protein-coupled receptor 152##NM_206997|GPR152|390212|G protein-coupled receptor 152##NM_003977|AIP|9049|aryl hydrocarbon receptor interacting protein##U78521|AIP|9049|aryl hydrocarbon receptor interacting protein##BC104797|AIP|9049|aryl hydrocarbon receptor interacting protein##BC104827|AIP|9049|aryl hydrocarbon receptor interacting protein##U31913|AIP|9049|aryl hydrocarbon receptor interacting protein##EU446613|AIP|9049|aryl hydrocarbon receptor interacting protein##X98654|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1	0.0	
chr15	98854949	98855079	reg1008089.p1	11.993	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	-351063	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	-351095	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	-1528342	+	AK097062 AK097062 NM_182562	202596	-	TSC_hg19_v1_chr15_+_99191767 AB425196	336957	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	337742	+	BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor	0.999822	CTCF.p2:-9:1.000
chr4	103967984	103968100	reg1006636.p1	11.993	+	AY461581 TSC_hg19_v1_chr4_-_103940874 AF447585 DQ003059 NM_001100874 NM_139173	-27174	-	BC110794 TSC_hg19_v1_chr4_-_103940827 BC022079 BC046636 AK313592 BC132712 BC136966 BC144443	-27234	-	TSC_hg19_v1_chr4_+_103790197 AK292134 BC020831 BX537971 BC032300 AM392809 AM393385	-177826	+	BC047447 TSC_hg19_v1_chr4_-_103997468 AK299888	29431	-	TSC_hg19_v1_chr4_-_103997929 AK172823	29883	-	NM_178833	30127	-	AY461581|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##AF447585|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##DQ003059|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##NM_001100874|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##NM_139173|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC110794|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC022079|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC046636|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##AK313592|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC132712|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC136966|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC144443|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##AK292134|CISD2|493856|CDGSH iron sulfur domain 2##BC020831|CISD2|493856|CDGSH iron sulfur domain 2##BX537971|CISD2|493856|CDGSH iron sulfur domain 2##BC032300|CISD2|493856|CDGSH iron sulfur domain 2##AM392809|CISD2|493856|CDGSH iron sulfur domain 2##AM393385|CISD2|493856|CDGSH iron sulfur domain 2##BC047447|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##AK299888|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##AK172823|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##NM_178833|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2	0.118086	
chr8	60834200	60834372	reg1007194.p1	11.993	+	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	-802614	-	NM_003580 TSC_hg19_v1_chr8_-_59572413	-1261875	-	BC041124 TSC_hg19_v1_chr8_-_59572386	-1261900	-	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	359635	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	595154	+	AK297576 TSC_hg19_v1_chr8_+_61429494	595208	+	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC041124|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family##AK297576|RAB2A|5862|RAB2A, member RAS oncogene family	0.954303	CTCF.p2:9:0.954
chr3	113455441	113455583	reg1008668.p1	11.992	+	TSC_hg19_v1_chr3_-_113415490 BC043383 NM_001009899	-40100	-	NM_017699	-204295	+	AY099107 BC036951 TSC_hg19_v1_chr3_-_113234023 AK057966 AL832327 AL832148 NM_144718	-221519	-	AK296456 TSC_hg19_v1_chr3_-_113464788	9202	-	TSC_hg19_v1_chr3_-_113465043 CR749314 AK023090 AK307184 BC012731 AK311403 AK023256	9531	-	TSC_hg19_v1_chr3_-_113465109 NM_025146	9621	-	BC043383|KIAA2018|205717|KIAA2018##NM_001009899|KIAA2018|205717|KIAA2018##NM_017699|SIDT1|54847|SID1 transmembrane family, member 1##AY099107|SPICE1|152185|spindle and centriole associated protein 1##BC036951|SPICE1|152185|spindle and centriole associated protein 1##AK057966|SPICE1|152185|spindle and centriole associated protein 1##AL832327|SPICE1|152185|spindle and centriole associated protein 1##AL832148|SPICE1|152185|spindle and centriole associated protein 1##NM_144718|SPICE1|152185|spindle and centriole associated protein 1##AK296456|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##CR749314|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK023090|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK307184|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##BC012731|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK023256|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##NM_025146|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit	0.406295	CTCF.p2:-7:0.406
chr1	165570991	165571125	reg1008587.p1	11.991	+	TSC_hg19_v1_chr1_+_165513441 NM_001005214 BC132981 BC132983	-57586	+	AB593016 AK312922 NM_006917	-156513	-	AK127724 NM_177398	-245107	-	NM_004528	29051	+	TSC_hg19_v1_chr1_+_165600499 BC005964 DQ185045 AK312103 AF026977 AK223012 BC000505	29413	+	TSC_hg19_v1_chr1_-_165667539 AK302191 AK302183 X75425 U50203	96530	-	NM_001005214|LRRC52|440699|leucine rich repeat containing 52##BC132981|LRRC52|440699|leucine rich repeat containing 52##BC132983|LRRC52|440699|leucine rich repeat containing 52##AB593016|RXRG|6258|retinoid X receptor, gamma##AK312922|RXRG|6258|retinoid X receptor, gamma##NM_006917|RXRG|6258|retinoid X receptor, gamma##AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_004528|MGST3|4259|microsomal glutathione S-transferase 3##BC005964|MGST3|4259|microsomal glutathione S-transferase 3##DQ185045|MGST3|4259|microsomal glutathione S-transferase 3##AK312103|MGST3|4259|microsomal glutathione S-transferase 3##AF026977|MGST3|4259|microsomal glutathione S-transferase 3##AK223012|MGST3|4259|microsomal glutathione S-transferase 3##BC000505|MGST3|4259|microsomal glutathione S-transferase 3##AK302191|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK302183|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##X75425|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##U50203|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1	0.978084	CTCF.p2:-16:0.978
chr12	32608610	32608712	reg1006066.p2	11.991	+	AK313430 AK290188 NM_001003398 NM_001714 U90028 BC136372 TSC_hg19_v1_chr12_+_32260263	-348488	+	TSC_hg19_v1_chr12_+_32259750 BC010091	-348947	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	-496267	+	BC039708 BC063403 NM_139241 BC096746 AK057294 BC045552	46378	+	TSC_hg19_v1_chr12_+_32687260 AK303334	78602	+	TSC_hg19_v1_chr12_+_32832187 AK302565 NM_005690 NM_012062 NM_012063 AK311606	223496	+	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)##U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK303334|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK302565|DNM1L|10059|dynamin 1-like##NM_005690|DNM1L|10059|dynamin 1-like##NM_012062|DNM1L|10059|dynamin 1-like##NM_012063|DNM1L|10059|dynamin 1-like##AK311606|DNM1L|10059|dynamin 1-like	0.952666	CTCF.p2:-14:0.953
chr19	2273829	2273953	reg1007200.p1	11.991	+	TSC_hg19_v1_chr19_+_2269534 BC100291 BC013037 BC010063 BC081537 BC007247 BC053360 D87914 BC055397 U09202 BC093652 BC112133	-4349	+	TSC_hg19_v1_chr19_+_2269526 BC042364	-4365	+	TSC_hg19_v1_chr19_+_2269523 AK307221 NM_004152 AK309122	-4371	+	AK127680 BC107678 NM_198532	8286	-	TSC_hg19_v1_chr19_+_2289998 AK091795 AX747191	16106	+	NM_001101391	34264	-	BC100291|OAZ1|4946|ornithine decarboxylase antizyme 1##BC013037|OAZ1|4946|ornithine decarboxylase antizyme 1##BC010063|OAZ1|4946|ornithine decarboxylase antizyme 1##BC081537|OAZ1|4946|ornithine decarboxylase antizyme 1##BC007247|OAZ1|4946|ornithine decarboxylase antizyme 1##BC053360|OAZ1|4946|ornithine decarboxylase antizyme 1##D87914|OAZ1|4946|ornithine decarboxylase antizyme 1##BC055397|OAZ1|4946|ornithine decarboxylase antizyme 1##U09202|OAZ1|4946|ornithine decarboxylase antizyme 1##BC093652|OAZ1|4946|ornithine decarboxylase antizyme 1##BC112133|OAZ1|4946|ornithine decarboxylase antizyme 1##BC042364|OAZ1|4946|ornithine decarboxylase antizyme 1##AK307221|OAZ1|4946|ornithine decarboxylase antizyme 1##NM_004152|OAZ1|4946|ornithine decarboxylase antizyme 1##AK309122|SPPL2B|56928|signal peptide peptidase-like 2B##AK127680|C19orf35|374872|chromosome 19 open reading frame 35##BC107678|C19orf35|374872|chromosome 19 open reading frame 35##NM_198532|C19orf35|374872|chromosome 19 open reading frame 35##NM_001101391|LINGO3|645191|leucine rich repeat and Ig domain containing 3	0.997034	CTCF.p2:-1:0.997
chr2	153046551	153046665	reg1005441.p1	11.991	+	TSC_hg19_v1_chr2_-_153032266 AB463258 AM393419 CU688564 DQ892427 DQ895641 AK292265 AK292847 AK310863 AF042273 AF042274 AL133600 BC022277 BC028740 NM_005843	-14258	-	TSC_hg19_v1_chr2_-_152955813 AK291378	-90797	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	-91061	-	TSC_hg19_v1_chr2_+_153191687 NM_052905	145062	+	BC113878 BC114438 TSC_hg19_v1_chr2_+_153191857 AB067489 BC167159 AB385514	145365	+	TSC_hg19_v1_chr2_-_153573924 U70667 AF049524 AF049528 BC000273 BC073138 BC011788 AF049523 AK298547 AK024810 BC029414 NM_017892	527312	-	AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK291378|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_052905|FMNL2|114793|formin-like 2##BC113878|FMNL2|114793|formin-like 2##BC114438|FMNL2|114793|formin-like 2##AB067489|FMNL2|114793|formin-like 2##BC167159|FMNL2|114793|formin-like 2##U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	0.801793	CTCF.p2:-9:0.802
chr22	21561925	21562050	reg1006912.p1	11.991	+	BC062565 AJ000730 BC008814 NM_004173 TSC_hg19_v1_chr22_-_21386851	-175136	-	BC064805 NM_001159554 AB002058 CR456535 BC109209 AB528202 CU013135 CU013423 AK309079 NM_005446 BC047287 BC063553 BC033488	-192527	+	TSC_hg19_v1_chr22_+_21356508 AK096901 BC065749	-205506	+	NM_001128633	175675	+	NM_001128635	176052	+	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	209689	+	BC062565|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AJ000730|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC008814|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_004173|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC064805|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_001159554|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AB002058|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CR456535|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC109209|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013135|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013423|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK309079|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_005446|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC047287|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC063553|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC033488|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK096901|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##BC065749|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2	0.962445	CTCF.p2:14:0.962
chr4	3482370	3482484	reg1008273.p1	11.991	+	NM_001164673 NM_173660 AK091037 AX746744 BC141852 BC131544 AB220918	-17360	+	TSC_hg19_v1_chr4_+_3443701 AK314099 D14012 NM_001528	-38719	+	BC112190 BC112192 TSC_hg19_v1_chr4_+_3443674	-38760	+	AB463840 AK310598 M63959 TSC_hg19_v1_chr4_-_3534150 AK312698 AK222527 AK222504 AK310851 BX647984	51718	-	TSC_hg19_v1_chr4_-_3534154 BC105074 BC112067 AK292321 NM_002337	51761	-	TSC_hg19_v1_chr4_+_3768111 BC142625	285691	+	NM_001164673|DOK7|285489|docking protein 7##NM_173660|DOK7|285489|docking protein 7##AK091037|DOK7|285489|docking protein 7##BC141852|DOK7|285489|docking protein 7##BC131544|DOK7|285489|docking protein 7##AB220918|DOK7|285489|docking protein 7##AK314099|HGFAC|3083|HGF activator##D14012|HGFAC|3083|HGF activator##NM_001528|HGFAC|3083|HGF activator##BC112190|HGFAC|3083|HGF activator##BC112192|HGFAC|3083|HGF activator##AK310598|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##M63959|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK312698|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK222527|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK222504|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK310851|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BX647984|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC105074|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC112067|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK292321|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##NM_002337|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor	0.928186	CTCF.p2:-5:0.928
chr6	73326292	73326423	reg1007956.p1	11.991	+	NM_001168411 AK300853	-249900	+	AK308658 NM_001168410	-399895	+	AK309185 NM_001168409	-400213	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	5213	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	5532	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	5704	+	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK308658|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001168410|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK309185|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001168409|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5	0.994095	CTCF.p2:-23:0.994
chr8	41686400	41686545	reg1007407.p2	11.991	+	AK026601 TSC_hg19_v1_chr8_+_41685847	-647	+	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	-31332	-	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	-163709	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	67838	-	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	223027	-	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	324061	+	M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic##AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit	0.403705	CTCF.p2:19:0.404
chr9	124885382	124885504	reg1007318.p1	11.991	+	AF521886 NM_001139442 NM_194252	-29559	-	TSC_hg19_v1_chr9_-_124855560 AK125178	-29855	-	AY032952 NM_138709	-380380	+	TSC_hg19_v1_chr9_-_124922039 BC001016 AF044953	36569	-	TSC_hg19_v1_chr9_-_124922059 AK314135 AK301520 NM_014222	36630	-	AK128877 NM_198469 BC133690 AK302081 BC143440	36764	+	AF521886|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_001139442|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_194252|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##BC001016|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AF044953|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AK314135|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##NM_014222|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AK128877|MORN5|254956|MORN repeat containing 5##NM_198469|MORN5|254956|MORN repeat containing 5##BC133690|MORN5|254956|MORN repeat containing 5##AK302081|MORN5|254956|MORN repeat containing 5##BC143440|MORN5|254956|MORN repeat containing 5	1.481664	CTCF.p2:-11:1.000	CTCF.p2:14:0.482
chr5	32329584	32329696	reg1005386.p1	11.990	+	TSC_hg19_v1_chr5_-_32313095 AK000483 NM_001040446	-16507	-	AB385495 CU691208 TSC_hg19_v1_chr5_-_32313046 BC057393 AB051469 AY028703	-16635	-	TSC_hg19_v1_chr5_-_32174429 BC033725 AK057544 AK075156 NM_022130	-155209	-	TSC_hg19_v1_chr5_-_32388605 AK295297	58980	-	TSC_hg19_v1_chr5_-_32388710 AK025481	59084	-	TSC_hg19_v1_chr5_-_32403324 BC062986 BC051893	73713	-	AK000483|MTMR12|54545|myotubularin related protein 12##NM_001040446|MTMR12|54545|myotubularin related protein 12##BC057393|MTMR12|54545|myotubularin related protein 12##AB051469|MTMR12|54545|myotubularin related protein 12##AY028703|MTMR12|54545|myotubularin related protein 12##BC033725|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK057544|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK075156|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##NM_022130|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK295297|ZFR|51663|zinc finger RNA binding protein##AK025481|ZFR|51663|zinc finger RNA binding protein##BC062986|ZFR|51663|zinc finger RNA binding protein##BC051893|ZFR|51663|zinc finger RNA binding protein	0.963212	CTCF.p2:15:0.963
chr5	135418260	135418372	reg1007080.p1	11.989	+	TSC_hg19_v1_chr5_+_135364731 AB590111 DQ892178 EU176690 CU678832 BT009820	-53582	+	NM_000358 TSC_hg19_v1_chr5_+_135364679 AK094581 AK094055 AK222833 AK298603 AK093916 AK303643 BC026352 BC000097 BC004972 M77349	-53672	+	AB590696 BC093670 BC101579 AK314092 D63521 NM_002302	-127695	-	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	50213	+	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	50268	+	NM_001167576 NM_001167577 NM_020389	282847	-	DQ892178|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##EU176690|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BT009820|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##NM_000358|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK094581|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK094055|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK222833|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK298603|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK093916|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK303643|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC026352|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC000097|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC004972|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##M77349|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC093670|LECT2|3950|leukocyte cell-derived chemotaxin 2##BC101579|LECT2|3950|leukocyte cell-derived chemotaxin 2##AK314092|LECT2|3950|leukocyte cell-derived chemotaxin 2##D63521|LECT2|3950|leukocyte cell-derived chemotaxin 2##NM_002302|LECT2|3950|leukocyte cell-derived chemotaxin 2##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7	0.930736	CTCF.p2:10:0.931
chr9	21813118	21813235	reg1000993.p1	11.989	+	TSC_hg19_v1_chr9_+_21802691 CU693136 CR541670 CR541710	-10459	+	BC026106 TSC_hg19_v1_chr9_+_21802660 BC012316 BC018625	-10512	+	TSC_hg19_v1_chr9_+_21802647 AF109294 AY712791 NM_002451 U22233 L40432 AK300592 AK309365	-10536	+	AF115544 NM_058197 TSC_hg19_v1_chr9_-_21974857 DQ318021 L27211	161687	-	NM_000077 NM_001195132	161955	-	BT007020 TSC_hg19_v1_chr9_-_21994352 U26727	181173	-	CR541670|MTAP|4507|methylthioadenosine phosphorylase##CR541710|MTAP|4507|methylthioadenosine phosphorylase##BC026106|MTAP|4507|methylthioadenosine phosphorylase##BC012316|MTAP|4507|methylthioadenosine phosphorylase##BC018625|MTAP|4507|methylthioadenosine phosphorylase##AF109294|MTAP|4507|methylthioadenosine phosphorylase##AY712791|MTAP|4507|methylthioadenosine phosphorylase##NM_002451|MTAP|4507|methylthioadenosine phosphorylase##U22233|MTAP|4507|methylthioadenosine phosphorylase##L40432|MTAP|4507|methylthioadenosine phosphorylase##AK300592|MTAP|4507|methylthioadenosine phosphorylase##AK309365|MTAP|4507|methylthioadenosine phosphorylase##AF115544|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_058197|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##DQ318021|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##L27211|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_000077|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_001195132|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##BT007020|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##U26727|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	0.993308	CTCF.p2:-13:0.993
chr9	100968117	100968220	reg1005558.p1	11.987	+	TSC_hg19_v1_chr9_-_100954922 AK292788 BC011690 AB209809 NM_052820	-13235	-	NM_003389	-32995	-	TSC_hg19_v1_chr9_-_100881526 AK055833	-86624	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	49553	-	TSC_hg19_v1_chr9_-_101018013 NM_018421	49836	-	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	503017	-	AK292788|CORO2A|7464|coronin, actin binding protein, 2A##BC011690|CORO2A|7464|coronin, actin binding protein, 2A##AB209809|CORO2A|7464|coronin, actin binding protein, 2A##NM_052820|CORO2A|7464|coronin, actin binding protein, 2A##NM_003389|CORO2A|7464|coronin, actin binding protein, 2A##AK055833|TRIM14|9830|tripartite motif containing 14##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##NM_018421|TBC1D2|55357|TBC1 domain family, member 2##DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2	0.978137	CTCF.p2:4:0.978
chr10	31072904	31073074	reg1006918.p1	11.986	+	AF139543 BC066294 NM_183058	-154354	-	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-349868	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-350050	+	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	215463	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	247832	-	TSC_hg19_v1_chr10_+_31607451 BX647794	534447	+	AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1	0.470224	CTCF.p2:-21:0.244	CTCF.p2:100:0.227
chr10	90149336	90149465	reg1008655.p1	11.985	+	TSC_hg19_v1_chr10_+_89623420 U96180	-525973	+	TSC_hg19_v1_chr10_+_89623380 BC005821	-526011	+	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	-526174	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	193614	-	BC042900 BC031219 NM_001010939	197113	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	274780	+	U96180|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric	0.998807	CTCF.p2:3:0.999
chr1	152842426	152842553	reg1007528.p1	11.985	+	DQ991251 NM_001128600	-27160	+	NM_178348	-42541	+	BC031811 NM_178349	-58043	+	AK312020 BC014593 NM_030663 BC016744 X89960	8319	+	AK300492 AK301649 NM_005547	38541	+	NM_173080 BC112170 BC112172 BC069445 BC069549	100644	+	DQ991251|LCE6A|448835|late cornified envelope 6A##NM_001128600|LCE6A|448835|late cornified envelope 6A##NM_178348|LCE1A|353131|late cornified envelope 1A##BC031811|LCE1B|353132|late cornified envelope 1B##NM_178349|LCE1B|353132|late cornified envelope 1B##AK312020|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##BC014593|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##NM_030663|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##BC016744|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##X89960|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##AK300492|IVL|3713|involucrin##NM_005547|IVL|3713|involucrin##NM_173080|SPRR4|163778|small proline-rich protein 4##BC112170|SPRR4|163778|small proline-rich protein 4##BC112172|SPRR4|163778|small proline-rich protein 4##BC069445|SPRR4|163778|small proline-rich protein 4##BC069549|SPRR4|163778|small proline-rich protein 4	0.973295	CTCF.p2:-3:0.973
chr9	134622884	134622999	reg1006810.p2	11.984	+	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	-7651	-	D21239 NM_005312	-10017	-	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	-37739	-	Z36848 AF104252 AF230382 DQ099387 AB527898 EU446747 TSC_hg19_v1_chr9_-_134955238 BC064608 BC070331	332208	-	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	332309	-	TSC_hg19_v1_chr9_+_135037083 AY358165	414150	+	EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##Z36848|MED27|9442|mediator complex subunit 27##AF104252|MED27|9442|mediator complex subunit 27##AF230382|MED27|9442|mediator complex subunit 27##DQ099387|MED27|9442|mediator complex subunit 27##EU446747|MED27|9442|mediator complex subunit 27##BC064608|MED27|9442|mediator complex subunit 27##BC070331|MED27|9442|mediator complex subunit 27##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AY358165|NTNG2|84628|netrin G2	0.980018	CTCF.p2:21:0.980
chr5	130925350	130925484	reg1008470.p1	11.983	+	TSC_hg19_v1_chr5_+_130599794 BC058909	-325617	+	AK312406 TSC_hg19_v1_chr5_+_130599768	-325649	+	TSC_hg19_v1_chr5_+_130599764 BC023555 BC050430	-325661	+	AF478468 AF478469 AB527407 TSC_hg19_v1_chr5_-_130970764	45340	-	BC140820 BC144627 TSC_hg19_v1_chr5_-_130970834	45402	-	BC133703 TSC_hg19_v1_chr5_-_130970893 AF394782 AK302640	45461	-	BC058909|CDC42SE2|56990|CDC42 small effector 2##AK312406|CDC42SE2|56990|CDC42 small effector 2##BC023555|CDC42SE2|56990|CDC42 small effector 2##BC050430|CDC42SE2|56990|CDC42 small effector 2##AF478468|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF478469|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC140820|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC144627|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC133703|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF394782|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AK302640|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	0.968673	CTCF.p2:-10:0.969
chr11	88831194	88831320	reg1008102.p1	11.982	+	AK291362 NM_000842	-34442	-	AY608336 D28538 D28539 NM_001143831	-50118	-	TSC_hg19_v1_chr11_-_88070905 BX537913 NM_001114173 NM_001814 NM_148170	-760326	-	NM_000372 BC027179 M74314 Y00819 U01873 J03581	79823	+	AF261943 AJ704725 AJ704726 AJ704727 AJ704728 AJ704729 AY288918 CU691812 AK311389 BC040105 AK291830 AK298376 AF254621 BC034780 AB041035 NM_001143836 NM_016931 BC051371	393315	-	AK057189 NM_001143837	491521	-	AK291362|GRM5|2915|glutamate receptor, metabotropic 5##NM_000842|GRM5|2915|glutamate receptor, metabotropic 5##AY608336|GRM5|2915|glutamate receptor, metabotropic 5##D28538|GRM5|2915|glutamate receptor, metabotropic 5##D28539|GRM5|2915|glutamate receptor, metabotropic 5##NM_001143831|GRM5|2915|glutamate receptor, metabotropic 5##BX537913|CTSC|1075|cathepsin C##NM_001114173|CTSC|1075|cathepsin C##NM_001814|CTSC|1075|cathepsin C##NM_148170|CTSC|1075|cathepsin C##NM_000372|TYR|7299|tyrosinase (oculocutaneous albinism IA)##BC027179|TYR|7299|tyrosinase (oculocutaneous albinism IA)##M74314|TYR|7299|tyrosinase (oculocutaneous albinism IA)##Y00819|TYR|7299|tyrosinase (oculocutaneous albinism IA)##U01873|TYR|7299|tyrosinase (oculocutaneous albinism IA)##J03581|TYR|7299|tyrosinase (oculocutaneous albinism IA)##AF261943|NOX4|50507|NADPH oxidase 4##AJ704725|NOX4|50507|NADPH oxidase 4##AJ704726|NOX4|50507|NADPH oxidase 4##AJ704727|NOX4|50507|NADPH oxidase 4##AJ704728|NOX4|50507|NADPH oxidase 4##AJ704729|NOX4|50507|NADPH oxidase 4##AY288918|NOX4|50507|NADPH oxidase 4##AK311389|NOX4|50507|NADPH oxidase 4##BC040105|NOX4|50507|NADPH oxidase 4##AK291830|NOX4|50507|NADPH oxidase 4##AK298376|NOX4|50507|NADPH oxidase 4##AF254621|NOX4|50507|NADPH oxidase 4##AB041035|NOX4|50507|NADPH oxidase 4##NM_001143836|NOX4|50507|NADPH oxidase 4##NM_016931|NOX4|50507|NADPH oxidase 4##BC051371|NOX4|50507|NADPH oxidase 4##AK057189|NOX4|50507|NADPH oxidase 4##NM_001143837|NOX4|50507|NADPH oxidase 4	0.975571	CTCF.p2:-1:0.976
chr18	59850956	59851082	reg1008481.p1	11.982	+	AK096495 NM_173557	-290716	-	AF217289 BC101047 BC101048 BC101049 NM_031891	-693245	+	AK314130 NM_005912	-1811019	-	AF109219 TSC_hg19_v1_chr18_-_59854208	3175	-	TSC_hg19_v1_chr18_-_59854227 BC028363	3202	-	TSC_hg19_v1_chr18_-_59854258 AK315134	3224	-	AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##BC028363|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##AK315134|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.155587	
chr7	148659901	148660034	reg1006262.p1	11.982	+	TSC_hg19_v1_chr7_-_148581422 AK303637 NM_001203247 NM_001203248 NM_004456 NM_152998	-78541	-	TSC_hg19_v1_chr7_-_148581380 AK314291	-78586	-	TSC_hg19_v1_chr7_-_148581377 AK293239 AK303585	-78590	-	CU674214 DQ893573 DQ894347 TSC_hg19_v1_chr7_-_148725561 BC000425 BC001928 J05016 AK290971	65588	-	BC006344 BC011754 AK313299 TSC_hg19_v1_chr7_-_148725753	65776	-	TSC_hg19_v1_chr7_-_148725766 NM_004911	65805	-	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_001203247|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_001203248|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4##DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4##BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4##BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4##AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4##BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4##BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4##AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4##NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4	0.724608	CTCF.p2:6:0.725
chr11	118359310	118359457	reg1009175.p1	11.981	+	TSC_hg19_v1_chr11_+_118307211 D14540 NM_001197104 NM_005933 L22179 L04284	-52234	+	TSC_hg19_v1_chr11_+_118272320 BC015128 AF070655 AL050277 AF087846 AF092124 AK289568 BC070165 AM393064 AM393513 CU687060 CR533494 CR542211	-87047	+	NM_006476	-87280	+	EU489483 BC146916 BC146921 BC171906 BC171913 NM_001080441	38795	+	TSC_hg19_v1_chr11_+_118401755 NM_001144034 NM_001144035 NM_001144036 NM_001144037 NM_001144038 NM_032780	42395	+	TSC_hg19_v1_chr11_+_118401916 AK075437 AK293670 AK027305 AK056325 AK096260 AK124814 AK225415 AK292359 AK297255 AY358919 BC042896 BC051841	42536	+	D14540|MLL|4297|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)##NM_001197104|MLL|4297|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)##NM_005933|MLL|4297|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)##L04284|MLL|4297|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)##BC015128|ATP5L|10632|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G##AF070655|ATP5L|10632|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G##AL050277|ATP5L|10632|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G##AF087846|ATP5L|10632|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G##AF092124|ATP5L|10632|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G##AK289568|ATP5L|10632|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G##BC070165|ATP5L|10632|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G##AM393064|ATP5L|10632|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G##AM393513|ATP5L|10632|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G##CR533494|ATP5L|10632|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G##CR542211|ATP5L|10632|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G##NM_006476|ATP5L|10632|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G##EU489483|TTC36|143941|tetratricopeptide repeat domain 36##BC146916|TTC36|143941|tetratricopeptide repeat domain 36##BC146921|TTC36|143941|tetratricopeptide repeat domain 36##BC171906|TTC36|143941|tetratricopeptide repeat domain 36##BC171913|TTC36|143941|tetratricopeptide repeat domain 36##NM_001080441|TTC36|143941|tetratricopeptide repeat domain 36##NM_001144034|TMEM25|84866|transmembrane protein 25##NM_001144035|TMEM25|84866|transmembrane protein 25##NM_001144036|TMEM25|84866|transmembrane protein 25##NM_001144037|TMEM25|84866|transmembrane protein 25##NM_001144038|TMEM25|84866|transmembrane protein 25##NM_032780|TMEM25|84866|transmembrane protein 25##AK075437|TMEM25|84866|transmembrane protein 25##AK293670|TMEM25|84866|transmembrane protein 25##AK027305|TMEM25|84866|transmembrane protein 25##AK056325|TMEM25|84866|transmembrane protein 25##AK096260|TMEM25|84866|transmembrane protein 25##AK124814|TMEM25|84866|transmembrane protein 25##AK225415|TMEM25|84866|transmembrane protein 25##AK292359|TMEM25|84866|transmembrane protein 25##AK297255|TMEM25|84866|transmembrane protein 25##AY358919|TMEM25|84866|transmembrane protein 25##BC042896|TMEM25|84866|transmembrane protein 25##BC051841|TMEM25|84866|transmembrane protein 25	0.988159	CTCF.p2:12:0.988
chr3	52968776	52968894	reg1007198.p1	11.981	+	TSC_hg19_v1_chr3_-_52931595 NM_001198974 NM_198563	-37178	-	TSC_hg19_v1_chr3_-_52931547 AY726591 BC047015	-37386	-	NM_205853	-99601	-	TSC_hg19_v1_chr3_-_53079286 NM_001005159	110474	-	TSC_hg19_v1_chr3_-_53080023 BC014614 AF168132	111159	-	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	111228	-	NM_001198974|TMEM110-MUSTN1|100526772|TMEM110-MUSTN1 readthrough##NM_198563|TMEM110|375346|transmembrane protein 110##AY726591|TMEM110|375346|transmembrane protein 110##BC047015|TMEM110|375346|transmembrane protein 110##NM_205853|MUSTN1|389125|musculoskeletal, embryonic nuclear protein 1##NM_001005159|SFMBT1|51460|Scm-like with four mbt domains 1##BC014614|SFMBT1|51460|Scm-like with four mbt domains 1##AF168132|SFMBT1|51460|Scm-like with four mbt domains 1##AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1	0.0	
chr2	65492343	65492468	reg1007688.p1	11.980	+	NM_001005386 NM_005722 TSC_hg19_v1_chr2_+_65454944 AK295157 AK301634 BC014546 BX649080 AF006082 AK315205 AB462954 EU831978 EU832071	-37470	+	TSC_hg19_v1_chr2_-_65454728 AK055581	-37669	-	TSC_hg19_v1_chr2_-_65357263 NM_004161 NM_015543	-135064	-	TSC_hg19_v1_chr2_-_65593766 AK299079	101368	-	TSC_hg19_v1_chr2_-_65593867 NM_001128210	101493	-	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	166807	-	NM_001005386|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##NM_005722|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK295157|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK301634|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BC014546|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BX649080|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AF006082|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK315205|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU831978|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU832071|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK055581|LOC729324|729324|hCG1986447##NM_004161|RAB1A|5861|RAB1A, member RAS oncogene family##NM_015543|RAB1A|5861|RAB1A, member RAS oncogene family##AK299079|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_001128210|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2	0.979445	CTCF.p2:-17:0.979
chr7	38972270	38972418	reg1009351.p1	11.980	+	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	-23551	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	-301267	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	-301382	-	NM_001166018 NM_007252	45264	+	TSC_hg19_v1_chr7_+_39606002 AK314937 NM_020192 AK293511 AF226046 BC022043 CR457198 DQ892829 DQ896074 DQ896075	633625	+	TSC_hg19_v1_chr7_+_39663159 NM_005402	690822	+	HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin##NM_001166018|POU6F2|11281|POU class 6 homeobox 2##NM_007252|POU6F2|11281|POU class 6 homeobox 2##AK314937|YAE1D1|57002|Yae1 domain containing 1##NM_020192|YAE1D1|57002|Yae1 domain containing 1##AF226046|YAE1D1|57002|Yae1 domain containing 1##BC022043|YAE1D1|57002|Yae1 domain containing 1##CR457198|YAE1D1|57002|Yae1 domain containing 1##DQ892829|YAE1D1|57002|Yae1 domain containing 1##DQ896074|YAE1D1|57002|Yae1 domain containing 1##DQ896075|YAE1D1|57002|Yae1 domain containing 1##NM_005402|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)	0.974301	CTCF.p2:8:0.974
chr11	6526987	6527135	reg1009018.p1	11.979	+	AK096944 NM_144666 NM_173589 BX648742	-8552	+	TSC_hg19_v1_chr11_+_6502737 NM_012192 AF183415 AF150105 AK002130 AK058048 AK311763 BC011014 AF152355	-24320	+	TSC_hg19_v1_chr11_-_6502563 AK311655 AK300855 AK304512 AK309198 AK301856 AK301972 NM_001242854 NM_001242855 NM_001242856 NM_012402	-24426	-	D87060 AB385327 AB007869 TSC_hg19_v1_chr11_-_6624836 BC001071	97722	-	TSC_hg19_v1_chr11_-_6624837 NM_015324	97803	-	TSC_hg19_v1_chr11_+_6624983 AK293474 NM_001014794 NM_004517	97890	+	AK096944|DNHD1|144132|dynein heavy chain domain 1##NM_144666|DNHD1|144132|dynein heavy chain domain 1##NM_173589|DNHD1|144132|dynein heavy chain domain 1##BX648742|DNHD1|144132|dynein heavy chain domain 1##NM_012192|FXC1|26515|fracture callus 1 homolog (rat)##AF183415|FXC1|26515|fracture callus 1 homolog (rat)##AF150105|FXC1|26515|fracture callus 1 homolog (rat)##AK002130|FXC1|26515|fracture callus 1 homolog (rat)##AK058048|FXC1|26515|fracture callus 1 homolog (rat)##AK311763|FXC1|26515|fracture callus 1 homolog (rat)##BC011014|FXC1|26515|fracture callus 1 homolog (rat)##AF152355|FXC1|26515|fracture callus 1 homolog (rat)##AK311655|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK300855|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK304512|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK309198|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK301856|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK301972|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##NM_001242854|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##NM_001242855|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##NM_001242856|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##NM_012402|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##D87060|RRP8|23378|ribosomal RNA processing 8, methyltransferase, homolog (yeast)##AB007869|RRP8|23378|ribosomal RNA processing 8, methyltransferase, homolog (yeast)##BC001071|RRP8|23378|ribosomal RNA processing 8, methyltransferase, homolog (yeast)##NM_015324|RRP8|23378|ribosomal RNA processing 8, methyltransferase, homolog (yeast)##AK293474|ILK|3611|integrin-linked kinase##NM_001014794|ILK|3611|integrin-linked kinase##NM_004517|ILK|3611|integrin-linked kinase	0.982529	CTCF.p2:10:0.983
chr21	43237050	43237168	reg1006573.p1	11.979	+	AK027424 TSC_hg19_v1_chr21_-_43187270	-49842	-	TSC_hg19_v1_chr21_-_43187213 EU832165 EU832259 BC035755 BC110617 BC110618 AB047783 AJ278016 NM_020639	-49887	-	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	-357026	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	62389	-	BC062323 AL833323 NM_199050	109680	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	136974	-	AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4##NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2	1.015187	CTCF.p2:-5:0.985
chr22	47199374	47199495	reg1006680.p1	11.979	+	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	-40834	+	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	-65279	-	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	-65355	-	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	828069	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	1685846	+	AK125256 NM_015381 AK123443 AY358847	1772727	+	NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##AK093107|LOC284930|284930|uncharacterized LOC284930##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	0.998574	CTCF.p2:-2:0.999
chr7	98030599	98030694	reg1005400.p1	11.979	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-213	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-352	-	TSC_hg19_v1_chr7_-_98015920 D28374	-14732	-	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	216090	+	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	436884	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	436981	-	NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##D28374|RPS3A|6189|ribosomal protein S3A##NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130	0.422314	CTCF.p2:1:0.422
chr8	11816511	11816625	reg1006027.p2	11.979	+	TSC_hg19_v1_chr8_-_11725628 NM_001908 NM_147780 NM_147781 NM_147782 NM_147783	-90870	-	TSC_hg19_v1_chr8_-_11725624 AK075393	-90944	-	AK092070 AK130184 AK290239 AK297687 BC095408 TSC_hg19_v1_chr8_-_11725597 AK296845 BX647952	-90971	-	AY621333 DQ012026 NM_001033018	15539	-	AY621332 DQ012025 NM_001033017	23261	+	AY621331 DQ012024 NM_001033019 BC130461 BC130463	37221	-	NM_001908|CTSB|1508|cathepsin B##NM_147780|CTSB|1508|cathepsin B##NM_147781|CTSB|1508|cathepsin B##NM_147782|CTSB|1508|cathepsin B##NM_147783|CTSB|1508|cathepsin B##AK075393|CTSB|1508|cathepsin B##AK092070|CTSB|1508|cathepsin B##AK130184|CTSB|1508|cathepsin B##AK290239|CTSB|1508|cathepsin B##AK297687|CTSB|1508|cathepsin B##BC095408|CTSB|1508|cathepsin B##AK296845|CTSB|1508|cathepsin B##BX647952|CTSB|1508|cathepsin B##AY621333|DEFB136|613210|defensin, beta 136##DQ012026|DEFB136|613210|defensin, beta 136##NM_001033018|DEFB136|613210|defensin, beta 136##AY621332|DEFB135|613209|defensin, beta 135##DQ012025|DEFB135|613209|defensin, beta 135##NM_001033017|DEFB135|613209|defensin, beta 135##AY621331|DEFB134|613211|defensin, beta 134##DQ012024|DEFB134|613211|defensin, beta 134##NM_001033019|DEFB134|613211|defensin, beta 134##BC130461|DEFB134|613211|defensin, beta 134##BC130463|DEFB134|613211|defensin, beta 134	0.998806	CTCF.p2:4:0.965
chr14	100196412	100196510	reg1004899.p2	11.978	+	TSC_hg19_v1_chr14_+_100150596 AB209749 BC022539 AF094480 NM_006668	-45786	+	AB593097 AY358173 NM_001127258 NM_032425 BC132877 BC136577 HQ258579 AB593096	-84899	+	TSC_hg19_v1_chr14_-_100070545 NM_001144995	-125877	-	TSC_hg19_v1_chr14_+_100204058 AK307925	7589	+	AK299812 TSC_hg19_v1_chr14_+_100240040	43530	+	TSC_hg19_v1_chr14_+_100259749 AK126980 BX247979 NM_001008707 NM_004434 BC033043 U97018 BC032541 CU689414 DQ891556 DQ894743	63243	+	AB209749|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##BC022539|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##AF094480|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##NM_006668|CYP46A1|10858|cytochrome P450, family 46, subfamily A, polypeptide 1##AB593097|HHIPL1|84439|HHIP-like 1##AY358173|HHIPL1|84439|HHIP-like 1##NM_001127258|HHIPL1|84439|HHIP-like 1##NM_032425|HHIPL1|84439|HHIP-like 1##BC132877|HHIPL1|84439|HHIP-like 1##BC136577|HHIPL1|84439|HHIP-like 1##HQ258579|HHIPL1|84439|HHIP-like 1##AB593096|HHIPL1|84439|HHIP-like 1##NM_001144995|CCDC85C|317762|coiled-coil domain containing 85C##AK307925|EML1|2009|echinoderm microtubule associated protein like 1##AK299812|EML1|2009|echinoderm microtubule associated protein like 1##AK126980|EML1|2009|echinoderm microtubule associated protein like 1##BX247979|EML1|2009|echinoderm microtubule associated protein like 1##NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1##NM_004434|EML1|2009|echinoderm microtubule associated protein like 1##BC033043|EML1|2009|echinoderm microtubule associated protein like 1##U97018|EML1|2009|echinoderm microtubule associated protein like 1##BC032541|EML1|2009|echinoderm microtubule associated protein like 1##DQ891556|EML1|2009|echinoderm microtubule associated protein like 1##DQ894743|EML1|2009|echinoderm microtubule associated protein like 1	0.01961	
chr2	143919943	143920081	reg1009311.p1	11.978	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	-33021	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	-33082	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-284772	+	NM_024659	1074893	-	AY281366 NM_001006636	1132047	-	BC017741 AK291357 TSC_hg19_v1_chr2_-_145090037 BC061699	1170020	-	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1##AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1##BC017741|GTDC1|79712|glycosyltransferase-like domain containing 1##AK291357|GTDC1|79712|glycosyltransferase-like domain containing 1##BC061699|GTDC1|79712|glycosyltransferase-like domain containing 1	0.153258	
chr6	34216929	34217062	reg1005559.p2	11.978	+	TSC_hg19_v1_chr6_-_34216832 BC009526 NM_001008703 NM_001008704 NM_178508	-132	-	BC047919 TSC_hg19_v1_chr6_-_34216784 BC023627 AK290164	-202	-	AK311680 TSC_hg19_v1_chr6_+_34216344	-645	+	TSC_hg19_v1_chr6_-_34360182 AB463951 BT019984 BT019985 DQ893118 DQ896391 AF062529 AF062530	143206	-	TSC_hg19_v1_chr6_-_34360360 AK313440	143340	-	TSC_hg19_v1_chr6_-_34360425 BC007727	143425	-	BC009526|C6orf1|221491|chromosome 6 open reading frame 1##NM_001008703|C6orf1|221491|chromosome 6 open reading frame 1##NM_001008704|C6orf1|221491|chromosome 6 open reading frame 1##NM_178508|C6orf1|221491|chromosome 6 open reading frame 1##BC047919|C6orf1|221491|chromosome 6 open reading frame 1##BC023627|C6orf1|221491|chromosome 6 open reading frame 1##AK290164|C6orf1|221491|chromosome 6 open reading frame 1##BT019984|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##BT019985|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##DQ893118|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##DQ896391|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AF062529|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AF062530|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AK313440|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##BC007727|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3	0.18533	
chr2	65867774	65867918	reg1009112.p1	11.976	+	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	-204009	+	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	-208170	-	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	-208634	-	AL832770 BC043503 NM_002398	794677	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	794994	+	TSC_hg19_v1_chr2_+_66666452 AK297109	798604	+	AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein##BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AL832770|MEIS1|4211|Meis homeobox 1##BC043503|MEIS1|4211|Meis homeobox 1##NM_002398|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##AK297109|MEIS1|4211|Meis homeobox 1	0.97911	CTCF.p2:-10:0.979
chr10	105969471	105969622	reg1009365.p1	11.975	+	NM_145247 BC140835 NM_001002759 BC043256 AK291184	-87637	+	BC004478 D63465 TSC_hg19_v1_chr10_-_105845639 NM_000494	-123917	-	AK300117 TSC_hg19_v1_chr10_-_105845560 M91669 AK300226 AK309940	-123977	-	AL136901 TSC_hg19_v1_chr10_-_105992103 AK026597 AK295018 BC071565 BC036647 NM_025145	22548	-	NM_001191003	44405	+	NM_001191002 NM_004832 BX537431 TSC_hg19_v1_chr10_+_106014658 AK313680 BC000127 AF212303 U90313 AB590772	45035	+	NM_145247|SFR1|119392|SWI5-dependent recombination repair 1##BC140835|SFR1|119392|SWI5-dependent recombination repair 1##NM_001002759|SFR1|119392|SWI5-dependent recombination repair 1##BC043256|SFR1|119392|SWI5-dependent recombination repair 1##AK291184|SFR1|119392|SWI5-dependent recombination repair 1##BC004478|COL17A1|1308|collagen, type XVII, alpha 1##D63465|COL17A1|1308|collagen, type XVII, alpha 1##NM_000494|COL17A1|1308|collagen, type XVII, alpha 1##M91669|COL17A1|1308|collagen, type XVII, alpha 1##AK309940|COL17A1|1308|collagen, type XVII, alpha 1##AL136901|WDR96|80217|WD repeat domain 96##AK026597|WDR96|80217|WD repeat domain 96##AK295018|WDR96|80217|WD repeat domain 96##BC071565|WDR96|80217|WD repeat domain 96##BC036647|WDR96|80217|WD repeat domain 96##NM_025145|WDR96|80217|WD repeat domain 96##NM_001191003|GSTO1|9446|glutathione S-transferase omega 1##NM_001191002|GSTO1|9446|glutathione S-transferase omega 1##NM_004832|GSTO1|9446|glutathione S-transferase omega 1##BX537431|GSTO1|9446|glutathione S-transferase omega 1##AK313680|GSTO1|9446|glutathione S-transferase omega 1##BC000127|GSTO1|9446|glutathione S-transferase omega 1##AF212303|GSTO1|9446|glutathione S-transferase omega 1##U90313|GSTO1|9446|glutathione S-transferase omega 1	0.034252	
chr19	4732737	4732870	reg1006948.p1	11.975	+	TSC_hg19_v1_chr19_-_4723831 AF542510 AK122654 NM_139159 AF452102	-8959	-	BC037948 TSC_hg19_v1_chr19_-_4723798	-9003	-	TSC_hg19_v1_chr19_-_4723770 AK131499	-9036	-	TSC_hg19_v1_chr19_+_4769144 AB058892 AB058893 BC090884 BC117294 BC117296 BC143983	36358	+	NM_018708 TSC_hg19_v1_chr19_+_4791745	58933	+	AK126532 AK315554 TSC_hg19_v1_chr19_+_4791756	58953	+	AF542510|DPP9|91039|dipeptidyl-peptidase 9##AK122654|DPP9|91039|dipeptidyl-peptidase 9##NM_139159|DPP9|91039|dipeptidyl-peptidase 9##AF452102|DPP9|91039|dipeptidyl-peptidase 9##BC037948|DPP9|91039|dipeptidyl-peptidase 9##AK131499|DPP9|91039|dipeptidyl-peptidase 9##AB058892|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##AB058893|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##BC090884|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##BC117294|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##BC117296|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##NM_018708|FEM1A|55527|fem-1 homolog a (C. elegans)##AK126532|FEM1A|55527|fem-1 homolog a (C. elegans)##AK315554|FEM1A|55527|fem-1 homolog a (C. elegans)	0.971377	CTCF.p2:4:0.971
chr8	139739760	139739891	reg1007936.p1	11.975	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-230719	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-3269624	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-3270167	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	186419	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	975457	-	AB067469 TSC_hg19_v1_chr8_-_141467841	1728000	-	AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9	1.020986	CTCF.p2:-23:0.996
chr10	23991956	23992056	reg1006536.p2	11.974	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	-8329	+	AB188491 NM_001145373 TSC_hg19_v1_chr10_+_23728216	-263796	+	BC035732 NM_153714	-358235	-	AK091142 AX746804 NM_001098501 NM_019590 TSC_hg19_v1_chr10_+_24497850	505782	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	506088	+	TSC_hg19_v1_chr10_+_24755441 AK300422	763438	+	AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217##AB188491|OTUD1|220213|OTU domain containing 1##NM_001145373|OTUD1|220213|OTU domain containing 1##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67##AK091142|KIAA1217|56243|KIAA1217##NM_001098501|KIAA1217|56243|KIAA1217##NM_019590|KIAA1217|56243|KIAA1217##AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217	0.955928	CTCF.p2:-7:0.956
chr1	55606349	55606474	reg1007417.p1	11.974	+	TSC_hg19_v1_chr1_+_55505220 AK075365	-101187	+	NM_174936 TSC_hg19_v1_chr1_+_55505192	-101241	+	AK129999 AY034632 NM_057176 BC103898 BC103899 BC103900	-141790	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	74625	-	TSC_hg19_v1_chr1_+_55681088 BC040313	74673	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	1438608	-	AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##NM_174936|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AK129999|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##AY034632|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_057176|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103898|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103899|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103900|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_015306|USP24|23358|ubiquitin specific peptidase 24##BC040313|LOC100507634|100507634|uncharacterized LOC100507634##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.980614	CTCF.p2:-20:0.981
chr5	134896618	134896746	reg1006378.p2	11.973	+	BC008687 BC028226 NM_006161 TSC_hg19_v1_chr5_-_134871655 AB593107 AK314280	-25036	-	AK131088 AB161513 NM_001099221	-108645	-	CU686932 BC074831 BC074832 BC069608 BC069610 BC117156 BC117158 AB074498 NM_130848	-113765	-	AF086340 AF073957 AF144103 BT007080 AB528117 AM392840 AF106911 BC003513 AY358906 TSC_hg19_v1_chr5_-_134914682 AB543622 AK075514	17891	-	NM_004887	18286	-	AK126812 NM_145282 BC025747	273707	+	BC008687|NEUROG1|4762|neurogenin 1##BC028226|NEUROG1|4762|neurogenin 1##NM_006161|NEUROG1|4762|neurogenin 1##AB593107|NEUROG1|4762|neurogenin 1##AB161513|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##NM_001099221|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##BC074831|C5orf20|140947|chromosome 5 open reading frame 20##BC074832|C5orf20|140947|chromosome 5 open reading frame 20##BC069608|C5orf20|140947|chromosome 5 open reading frame 20##BC069610|C5orf20|140947|chromosome 5 open reading frame 20##BC117156|C5orf20|140947|chromosome 5 open reading frame 20##BC117158|C5orf20|140947|chromosome 5 open reading frame 20##AB074498|C5orf20|140947|chromosome 5 open reading frame 20##NM_130848|C5orf20|140947|chromosome 5 open reading frame 20##AF086340|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF073957|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF144103|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BT007080|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AM392840|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF106911|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BC003513|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AY358906|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AB543622|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AK075514|CXCL14|9547|chemokine (C-X-C motif) ligand 14##NM_004887|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AK126812|SLC25A48|153328|solute carrier family 25, member 48##NM_145282|SLC25A48|153328|solute carrier family 25, member 48##BC025747|SLC25A48|153328|solute carrier family 25, member 48	0.902616	CTCF.p2:-11:0.903
chr13	30046629	30046753	reg1007789.p1	11.972	+	BC032481 NM_015233 AK293970 BC119654 BC119655 BC129985	-43881	+	BC150245 AB018317 NM_001033602 AB384524	-447916	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	-753636	-	AK301633 TSC_hg19_v1_chr13_+_30070532	23816	+	X59155 X57303 TSC_hg19_v1_chr13_-_30169595 AK312818 BC063303	122930	-	TSC_hg19_v1_chr13_-_30169826 NM_003045	123129	-	BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC150245|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AB018317|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_001033602|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3##AK301633|MTUS2|23281|microtubule associated tumor suppressor candidate 2##X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##NM_003045|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	1.792947	CTCF.p2:5:0.809	CTCF.p2:-25:0.984
chr3	129721959	129722094	reg1009033.p1	11.972	+	NM_007117 TSC_hg19_v1_chr3_+_129693145	-28897	+	TSC_hg19_v1_chr3_+_129612705 AK127796	-109308	+	TSC_hg19_v1_chr3_-_129612445 NM_001128224	-109608	-	NM_001136152 BC127755	78712	+	TSC_hg19_v1_chr3_-_129830276 BC083497	108269	-	TSC_hg19_v1_chr3_-_129830331 BC071676	108323	-	NM_007117|TRH|7200|thyrotropin-releasing hormone##AK127796|LOC100507032|100507032|uncharacterized LOC100507032##NM_001128224|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001136152|ALG1L2|644974|asparagine-linked glycosylation 1-like 2	0.999894	CTCF.p2:-3:1.000
chr6	88101179	88101300	reg1008109.p1	11.972	+	NM_001010868	-46669	+	BC057813 NM_198568	-62244	-	TSC_hg19_v1_chr6_+_88032305 NM_001042493 NM_020425 BC070260 BC032824 AK311963	-68928	+	NM_001031743 BC035083 AK292584 AK093830 AX748329 BC045171	16477	+	TSC_hg19_v1_chr6_+_88182658 NM_001168398 NM_006416	81412	+	TSC_hg19_v1_chr6_+_88182694 AK293696 AK299432 BC008372 BC017807 D87969	81447	+	NM_001010868|C6orf163|206412|chromosome 6 open reading frame 163##BC057813|GJB7|375519|gap junction protein, beta 7, 25kDa##NM_198568|GJB7|375519|gap junction protein, beta 7, 25kDa##NM_001042493|C6orf162|57150|chromosome 6 open reading frame 162##NM_020425|C6orf162|57150|chromosome 6 open reading frame 162##BC070260|C6orf162|57150|chromosome 6 open reading frame 162##AK311963|C6orf162|57150|chromosome 6 open reading frame 162##NM_001031743|C6orf165|154313|chromosome 6 open reading frame 165##BC035083|C6orf165|154313|chromosome 6 open reading frame 165##AK093830|C6orf165|154313|chromosome 6 open reading frame 165##BC045171|C6orf165|154313|chromosome 6 open reading frame 165##NM_001168398|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##NM_006416|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##AK293696|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##AK299432|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##BC008372|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##BC017807|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##D87969|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1	0.314934	CTCF.p2:6:0.315
chr8	113774271	113774396	reg1006896.p1	11.971	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-2787367	-	NM_001099743 NM_001099744	-3070314	-	AK290469 NM_001099745 NM_001099746	-3081100	-	AB114605 NM_198124	615048	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	674796	-	TSC_hg19_v1_chr8_-_116680208 AK304046	2905887	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.993056	CTCF.p2:-7:0.993
chr17	8013676	8013792	reg1007997.p1	11.970	+	AF038461 NM_001139	-22714	-	TSC_hg19_v1_chr17_+_7982776 AK096086 BC046191	-30959	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	-53532	+	AJ269499 AK313677 NM_021628	8098	-	AK296416 AK299742 NM_001165960	8449	-	BC039887 AB049064 AB463716 NM_001165967 NM_032580	13668	-	AF038461|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##NM_001139|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##AJ269499|ALOXE3|59344|arachidonate lipoxygenase 3##AK313677|ALOXE3|59344|arachidonate lipoxygenase 3##NM_021628|ALOXE3|59344|arachidonate lipoxygenase 3##AK296416|ALOXE3|59344|arachidonate lipoxygenase 3##AK299742|ALOXE3|59344|arachidonate lipoxygenase 3##NM_001165960|ALOXE3|59344|arachidonate lipoxygenase 3##BC039887|HES7|84667|hairy and enhancer of split 7 (Drosophila)##AB049064|HES7|84667|hairy and enhancer of split 7 (Drosophila)##NM_001165967|HES7|84667|hairy and enhancer of split 7 (Drosophila)##NM_032580|HES7|84667|hairy and enhancer of split 7 (Drosophila)	0.931973	CTCF.p2:-3:0.932
chr6	131193523	131193640	reg1006837.p2	11.970	+	BC113027 NM_001195597 AK091900 AX747243 BC101422 BC101423 BC101424 BC101425 BC113026 TSC_hg19_v1_chr6_+_131148577	-45019	+	AB052099 NM_052913	-435320	+	AK091882 AX747235 NM_001017373	-649483	-	TSC_hg19_v1_chr6_-_131291480 AK307764 NM_001199389	97970	-	CR749262 CR936793 NM_001252660	128306	-	AF027299 TSC_hg19_v1_chr6_-_131384381 BC034718 AB209522	190770	-	BC113027|LOC100507203|100507203|uncharacterized LOC100507203##NM_001195597|LOC100507203|100507203|uncharacterized LOC100507203##AK091900|LOC100507203|100507203|uncharacterized LOC100507203##BC101422|LOC100507203|100507203|uncharacterized LOC100507203##BC101423|LOC100507203|100507203|uncharacterized LOC100507203##BC101424|LOC100507203|100507203|uncharacterized LOC100507203##BC101425|LOC100507203|100507203|uncharacterized LOC100507203##BC113026|LOC100507203|100507203|uncharacterized LOC100507203##AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A##AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AF027299|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##BC034718|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AB209522|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	0.998111	CTCF.p2:1:0.998
chr6	33739404	33739539	reg1006790.p2	11.970	+	AK056586 AK223572 AK289935 BC089389 NM_001142883 NM_054111	-24750	-	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	-59958	-	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	-60008	-	AK301083 NM_001143944	15244	-	TSC_hg19_v1_chr6_-_33756897 BC051803	17420	-	BC039864 NM_181336 TSC_hg19_v1_chr6_-_33756906	17439	-	AK056586|IP6K3|117283|inositol hexakisphosphate kinase 3##AK223572|IP6K3|117283|inositol hexakisphosphate kinase 3##AK289935|IP6K3|117283|inositol hexakisphosphate kinase 3##BC089389|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_001142883|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_054111|IP6K3|117283|inositol hexakisphosphate kinase 3##AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##AK301083|LEMD2|221496|LEM domain containing 2##NM_001143944|LEMD2|221496|LEM domain containing 2##BC051803|LEMD2|221496|LEM domain containing 2##BC039864|LEMD2|221496|LEM domain containing 2##NM_181336|LEMD2|221496|LEM domain containing 2	0.995254	CTCF.p2:-15:0.995
chr8	81595291	81595409	reg1007698.p1	11.970	+	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-196866	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-511580	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-602321	-	AK131274 NM_001033723	191665	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	428964	-	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	597423	+	AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	0.055781	
chr11	118801066	118801190	reg1005031.p1	11.969	+	AB094091 NM_182557	-19516	-	NM_032966 X68829	-37028	+	AK291512 NM_001716 BC110352 X68149 AB464488	-46568	+	NM_006760 Y13645 BC113900 AY455312 AB009454	25935	+	AB094092 NM_181721 BC028191 BC125040 BC038969	41350	+	TSC_hg19_v1_chr11_+_118868847 AB094093 NM_198489	67721	+	AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_006760|UPK2|7379|uroplakin 2##Y13645|UPK2|7379|uroplakin 2##BC113900|UPK2|7379|uroplakin 2##AY455312|UPK2|7379|uroplakin 2##AB009454|UPK2|7379|uroplakin 2##AB094092|FOXR1|283150|forkhead box R1##NM_181721|FOXR1|283150|forkhead box R1##BC028191|FOXR1|283150|forkhead box R1##BC125040|FOXR1|283150|forkhead box R1##BC038969|FOXR1|283150|forkhead box R1##AB094093|CCDC84|338657|coiled-coil domain containing 84##NM_198489|CCDC84|338657|coiled-coil domain containing 84	0.99833	CTCF.p2:15:0.998
chr12	69464240	69464350	reg1007138.p2	11.969	+	J04970 NM_001874 AK127859	-107276	-	TSC_hg19_v1_chr12_-_69326952 AF368463 AK313180 BC022276 NM_001005502 NM_198320	-137333	-	EU076746 EU076747 EU076748 EU076749 TSC_hg19_v1_chr12_+_69202803	-261494	+	NM_007007 TSC_hg19_v1_chr12_+_69633348 AK223568 AK299928	169038	+	TSC_hg19_v1_chr12_+_69633357 BC005000 BC000714 X67337 AK292024 CU674352 CU678850 DQ892159 EU176688	169094	+	TSC_hg19_v1_chr12_+_69742133 AK130149 NM_000239	277836	+	J04970|CPM|1368|carboxypeptidase M##NM_001874|CPM|1368|carboxypeptidase M##AK127859|CPM|1368|carboxypeptidase M##AF368463|CPM|1368|carboxypeptidase M##AK313180|CPM|1368|carboxypeptidase M##BC022276|CPM|1368|carboxypeptidase M##NM_001005502|CPM|1368|carboxypeptidase M##NM_198320|CPM|1368|carboxypeptidase M##EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK130149|LYZ|4069|lysozyme##NM_000239|LYZ|4069|lysozyme	0.978178	CTCF.p2:1:0.978
chr9	129253685	129253828	reg1008759.p1	11.969	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-164589	+	AK309713 NM_001134778	-743279	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-744056	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	123005	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	313554	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	369188	+	NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34	0.962676	CTCF.p2:7:0.963
chr20	34035145	34035260	reg1005019.p2	11.968	+	AB593125 U13660 NM_000557	-9212	-	TSC_hg19_v1_chr20_-_33999791 AK225281 AK293149 BC119013 BC122862 AY050659 NM_001184977 NM_018244 NM_199487	-35340	-	BC008871 AB528278 AM392884 AM393853 TSC_hg19_v1_chr20_-_33999777 AK001712 AK022650 AK022742 AK225557 AK293516 AK300130 AK302133 AK308819 BC105791	-35433	-	TSC_hg19_v1_chr20_+_34042987 AK307861 AB621828 AF049105 NM_007186	7872	+	AK058089 AK310337 NM_001145350	82261	-	NM_015966 NM_198398 TSC_hg19_v1_chr20_+_34129827 AF308298 AF077030 AF151812 EF206690 BC014014	94600	+	AB593125|GDF5|8200|growth differentiation factor 5##U13660|GDF5|8200|growth differentiation factor 5##NM_000557|GDF5|8200|growth differentiation factor 5##AK225281|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293149|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC119013|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC122862|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AY050659|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_001184977|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_018244|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_199487|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC008871|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AM392884|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AM393853|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK001712|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK022650|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK022742|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK225557|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293516|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK300130|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK302133|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK308819|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC105791|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK307861|CEP250|11190|centrosomal protein 250kDa##AF049105|CEP250|11190|centrosomal protein 250kDa##NM_007186|CEP250|11190|centrosomal protein 250kDa##AK058089|C20orf173|140873|chromosome 20 open reading frame 173##AK310337|C20orf173|140873|chromosome 20 open reading frame 173##NM_001145350|C20orf173|140873|chromosome 20 open reading frame 173##NM_015966|ERGIC3|51614|ERGIC and golgi 3##NM_198398|ERGIC3|51614|ERGIC and golgi 3##AF308298|ERGIC3|51614|ERGIC and golgi 3##AF077030|ERGIC3|51614|ERGIC and golgi 3##AF151812|ERGIC3|51614|ERGIC and golgi 3##EF206690|ERGIC3|51614|ERGIC and golgi 3##BC014014|ERGIC3|51614|ERGIC and golgi 3	0.887434	CTCF.p2:-7:0.887
chr4	100326803	100326912	reg1005399.p2	11.968	+	CU688112 BC074786 BC066227 BC066228 BC067419 BC067420 BC067421 BC067422 BC074771 BC062476 M12272 X04299 TSC_hg19_v1_chr4_-_100273904 NM_000669	-52984	-	BT019812 D00137 M24317 M21692 AK304396 BX647469 AF153821 AK299409 AK316501 X03350 AK301018 AK303945 AK311712 BC033009 TSC_hg19_v1_chr4_-_100242559 NM_000668	-84328	-	M12271 BC074738 BC117442 BC126306 AK290558 M12963 AK309597 NM_000667	-114723	-	AK301696 NM_001166504	29433	-	X76342 AK223472 BC131512 U07821 AK301657 AK310811 AK312854 NM_000673	29700	-	NM_032149 AK093085 AX747911 AK223345 AK314711 AL136838	105322	+	BC074786|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC066227|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC066228|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067419|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067420|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067421|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067422|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC074771|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC062476|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##M12272|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##X04299|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##NM_000669|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BT019812|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##D00137|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##M24317|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##M21692|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK304396|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##BX647469|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AF153821|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK299409|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK316501|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##X03350|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK301018|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK303945|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##BC033009|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##NM_000668|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##M12271|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##BC074738|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##BC117442|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##BC126306|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##AK290558|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##M12963|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##AK309597|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##NM_000667|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##AK301696|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_001166504|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##X76342|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK223472|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##BC131512|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##U07821|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK301657|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK310811|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK312854|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_000673|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_032149|C4orf17|84103|chromosome 4 open reading frame 17##AK093085|C4orf17|84103|chromosome 4 open reading frame 17##AK223345|C4orf17|84103|chromosome 4 open reading frame 17##AK314711|C4orf17|84103|chromosome 4 open reading frame 17##AL136838|C4orf17|84103|chromosome 4 open reading frame 17	0.053695	
chr1	68226036	68226183	reg1004026.p2	11.967	+	TSC_hg19_v1_chr1_+_68151094 AB463698 AM393439 DQ893229 DQ896558	-74975	+	TSC_hg19_v1_chr1_+_68150883 AK314991 NM_001199741 NM_001199742 NM_001924 M60974 BC011757 DQ008445 EF581092 EF614238	-75199	+	TSC_hg19_v1_chr1_-_67896101 NM_001018067 NM_001018068 NM_001018069 NM_015640	-329992	-	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	71879	+	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	73001	-	BC005362 U96750 NM_004675	290276	-	AM393439|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ893229|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ896558|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001018067|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018068|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018069|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_015640|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK124028|LOC100289178|100289178|uncharacterized LOC100289178##AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3	0.402679	CTCF.p2:16:0.403
chr17	79700887	79700987	reg1007269.p1	11.967	+	TSC_hg19_v1_chr17_+_79679402 AJ131613 DQ893263 DQ896592 CU675633	-21510	+	BC007355 NM_012140 TSC_hg19_v1_chr17_+_79679381 AK075249	-21556	+	TSC_hg19_v1_chr17_+_79679341 BC015797	-21613	+	AK307234 NM_000160 AK314247 L20316	61079	+	TSC_hg19_v1_chr17_-_79791143 BC017108 BC063557 BC019318 BC094876	90150	-	AK000852 TSC_hg19_v1_chr17_-_79791171 BX649156 NM_001093767 NM_207368	90224	-	AJ131613|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##DQ893263|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##DQ896592|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##BC007355|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##NM_012140|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##AK075249|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##BC015797|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##AK307234|GCGR|2642|glucagon receptor##NM_000160|GCGR|2642|glucagon receptor##AK314247|GCGR|2642|glucagon receptor##L20316|GCGR|2642|glucagon receptor##BC017108|FAM195B|348262|family with sequence similarity 195, member B##BC063557|FAM195B|348262|family with sequence similarity 195, member B##BC019318|FAM195B|348262|family with sequence similarity 195, member B##BC094876|FAM195B|348262|family with sequence similarity 195, member B##AK000852|FAM195B|348262|family with sequence similarity 195, member B##BX649156|FAM195B|348262|family with sequence similarity 195, member B##NM_001093767|FAM195B|348262|family with sequence similarity 195, member B##NM_207368|FAM195B|348262|family with sequence similarity 195, member B	0.911615	CTCF.p2:1:0.912
chr19	51341648	51341829	reg1007615.p1	11.967	+	AY373373 AY373374 CU686842 CU686864 HQ258133 BC126137 BC144045 BC144046 BC144047 AF303046 BC069480 BC069507 BC069518 NM_017509 NM_138563 NM_138564	-6976	-	BT007253 S77952 DQ893072 DQ896328 AY703451 BC005313 M25629 X13561 AK293363 AY429508 NM_002257	-14716	-	TSC_hg19_v1_chr19_-_51307892 NM_199250 NM_199249	-33819	-	AF335477 AF335478 AX772834 AX772836 BC005307 NM_001030047 NM_001030048 NM_001030050 NM_001648 S75755 U17040 X05332 BC056665 AJ310937 AJ459784 AJ310938 AK311887 AK312933 AJ459782 AJ459783 AJ512346 M26663 DQ890670 DQ893851 AB463810 CU690730 BT019862 M21895 M21896 M21897	16458	+	AK300527 AK309982 BC005196 NM_001002231 NM_005551 AK309985 AK300549 AK300566 AK309973 AY429509 AY429510 AF188745 AF188746 AF188747 S39329 CU675035 AB590372 DQ890672 DQ893853 AF336106 BT006650	34970	+	AF113140 AF259969 AY923170 BC069325 BC069403 BC069429 BC069489 BC096175 BC096176 BC096177 BC096178 CU686804 NM_004917	72255	-	AY373373|KLK15|55554|kallikrein-related peptidase 15##AY373374|KLK15|55554|kallikrein-related peptidase 15##HQ258133|KLK15|55554|kallikrein-related peptidase 15##BC126137|KLK15|55554|kallikrein-related peptidase 15##BC144045|KLK15|55554|kallikrein-related peptidase 15##BC144046|KLK15|55554|kallikrein-related peptidase 15##BC144047|KLK15|55554|kallikrein-related peptidase 15##AF303046|KLK15|55554|kallikrein-related peptidase 15##BC069480|KLK15|55554|kallikrein-related peptidase 15##BC069507|KLK15|55554|kallikrein-related peptidase 15##BC069518|KLK15|55554|kallikrein-related peptidase 15##NM_017509|KLK15|55554|kallikrein-related peptidase 15##NM_138563|KLK15|55554|kallikrein-related peptidase 15##NM_138564|KLK15|55554|kallikrein-related peptidase 15##BT007253|KLK1|3816|kallikrein 1##S77952|KLK1|3816|kallikrein 1##DQ893072|KLK1|3816|kallikrein 1##DQ896328|KLK1|3816|kallikrein 1##AY703451|KLK1|3816|kallikrein 1##BC005313|KLK1|3816|kallikrein 1##M25629|KLK1|3816|kallikrein 1##X13561|KLK1|3816|kallikrein 1##AY429508|KLK1|3816|kallikrein 1##NM_002257|KLK1|3816|kallikrein 1##NM_199250|C19orf48|84798|chromosome 19 open reading frame 48##NM_199249|C19orf48|84798|chromosome 19 open reading frame 48##AF335477|KLK3|354|kallikrein-related peptidase 3##AF335478|KLK3|354|kallikrein-related peptidase 3##AX772834|KLK3|354|kallikrein-related peptidase 3##BC005307|KLK3|354|kallikrein-related peptidase 3##NM_001030047|KLK3|354|kallikrein-related peptidase 3##NM_001030048|KLK3|354|kallikrein-related peptidase 3##NM_001030050|KLK3|354|kallikrein-related peptidase 3##NM_001648|KLK3|354|kallikrein-related peptidase 3##S75755|KLK3|354|kallikrein-related peptidase 3##U17040|KLK3|354|kallikrein-related peptidase 3##X05332|KLK3|354|kallikrein-related peptidase 3##BC056665|KLK3|354|kallikrein-related peptidase 3##AJ310937|KLK3|354|kallikrein-related peptidase 3##AJ459784|KLK3|354|kallikrein-related peptidase 3##AJ310938|KLK3|354|kallikrein-related peptidase 3##AK312933|KLK3|354|kallikrein-related peptidase 3##AJ459782|KLK3|354|kallikrein-related peptidase 3##AJ459783|KLK3|354|kallikrein-related peptidase 3##AJ512346|KLK3|354|kallikrein-related peptidase 3##M26663|KLK3|354|kallikrein-related peptidase 3##DQ890670|KLK3|354|kallikrein-related peptidase 3##DQ893851|KLK3|354|kallikrein-related peptidase 3##BT019862|KLK3|354|kallikrein-related peptidase 3##M21895|KLK3|354|kallikrein-related peptidase 3##M21896|KLK3|354|kallikrein-related peptidase 3##M21897|KLK3|354|kallikrein-related peptidase 3##AK300527|KLK2|3817|kallikrein-related peptidase 2##AK309982|KLK2|3817|kallikrein-related peptidase 2##BC005196|KLK2|3817|kallikrein-related peptidase 2##NM_001002231|KLK2|3817|kallikrein-related peptidase 2##NM_005551|KLK2|3817|kallikrein-related peptidase 2##AK309985|KLK2|3817|kallikrein-related peptidase 2##AK300549|KLK2|3817|kallikrein-related peptidase 2##AK300566|KLK2|3817|kallikrein-related peptidase 2##AK309973|KLK2|3817|kallikrein-related peptidase 2##AY429509|KLK2|3817|kallikrein-related peptidase 2##AY429510|KLK2|3817|kallikrein-related peptidase 2##AF188745|KLK2|3817|kallikrein-related peptidase 2##AF188746|KLK2|3817|kallikrein-related peptidase 2##AF188747|KLK2|3817|kallikrein-related peptidase 2##S39329|KLK2|3817|kallikrein-related peptidase 2##DQ890672|KLK2|3817|kallikrein-related peptidase 2##DQ893853|KLK2|3817|kallikrein-related peptidase 2##AF336106|KLK2|3817|kallikrein-related peptidase 2##BT006650|KLK2|3817|kallikrein-related peptidase 2##AF113140|KLK4|9622|kallikrein-related peptidase 4##AF259969|KLK4|9622|kallikrein-related peptidase 4##AY923170|KLK4|9622|kallikrein-related peptidase 4##BC069325|KLK4|9622|kallikrein-related peptidase 4##BC069403|KLK4|9622|kallikrein-related peptidase 4##BC069429|KLK4|9622|kallikrein-related peptidase 4##BC069489|KLK4|9622|kallikrein-related peptidase 4##BC096175|KLK4|9622|kallikrein-related peptidase 4##BC096176|KLK4|9622|kallikrein-related peptidase 4##BC096177|KLK4|9622|kallikrein-related peptidase 4##BC096178|KLK4|9622|kallikrein-related peptidase 4##NM_004917|KLK4|9622|kallikrein-related peptidase 4	0.137629	
chr9	133558032	133558161	reg1007036.p1	11.967	+	AY004252 NM_021619	-18116	+	TSC_hg19_v1_chr9_+_133455030 BC007874	-103071	+	TSC_hg19_v1_chr9_+_133454991 U69127	-103100	+	TSC_hg19_v1_chr9_+_133569166 AK001916 AK296605 NM_014285 AK022460 AK090512 AK303163 BC000747 DQ892753 EU176744 AB463621	11068	+	NM_007313 AB209642 M14753	31223	+	TSC_hg19_v1_chr9_+_133710665 M30833 X16416	152571	+	AY004252|PRDM12|59335|PR domain containing 12##NM_021619|PRDM12|59335|PR domain containing 12##BC007874|FUBP3|8939|far upstream element (FUSE) binding protein 3##U69127|FUBP3|8939|far upstream element (FUSE) binding protein 3##AK001916|EXOSC2|23404|exosome component 2##AK296605|EXOSC2|23404|exosome component 2##NM_014285|EXOSC2|23404|exosome component 2##AK022460|EXOSC2|23404|exosome component 2##AK090512|EXOSC2|23404|exosome component 2##AK303163|EXOSC2|23404|exosome component 2##BC000747|EXOSC2|23404|exosome component 2##DQ892753|EXOSC2|23404|exosome component 2##EU176744|EXOSC2|23404|exosome component 2##NM_007313|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AB209642|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M14753|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	0.888152	CTCF.p2:1:0.888
chr1	6305247	6305323	reg1003958.p1	11.966	+	NM_001024598	-1034	+	TSC_hg19_v1_chr1_-_6296121 NM_012405	-9177	-	TSC_hg19_v1_chr1_-_6295993 BC028168 AF064084 AK092890 BC017037	-9275	-	BC068275 NM_207370 TSC_hg19_v1_chr1_-_6321125	15798	-	AB074419 AK291583 NM_181866	113699	-	AB074418 AK292202 NM_181865 AK304465	115457	-	NM_001024598|HES3|390992|hairy and enhancer of split 3 (Drosophila)##NM_012405|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##BC028168|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##AF064084|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##AK092890|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##BC017037|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##BC068275|GPR153|387509|G protein-coupled receptor 153##NM_207370|GPR153|387509|G protein-coupled receptor 153##AB074419|ACOT7|11332|acyl-CoA thioesterase 7##AK291583|ACOT7|11332|acyl-CoA thioesterase 7##NM_181866|ACOT7|11332|acyl-CoA thioesterase 7##AB074418|ACOT7|11332|acyl-CoA thioesterase 7##AK292202|ACOT7|11332|acyl-CoA thioesterase 7##NM_181865|ACOT7|11332|acyl-CoA thioesterase 7	0.978484	CTCF.p2:1:0.978
chr15	89672876	89672987	reg1007045.p1	11.965	+	TSC_hg19_v1_chr15_+_89631738 X12433	-41194	+	TSC_hg19_v1_chr15_+_89631708 AL110291 AK222841 AK290340 AK223083 AK296827	-41228	+	TSC_hg19_v1_chr15_+_89631652 BC090052 AF546700 BC019248	-41283	+	AL109729 TSC_hg19_v1_chr15_+_89739320	66347	+	AK312457 BC004199 NM_000326 DQ980611	91975	-	TSC_hg19_v1_chr15_+_89787197 NM_001113378 NM_018193 BC146804	114262	+	X12433|ABHD2|11057|abhydrolase domain containing 2##AL110291|ABHD2|11057|abhydrolase domain containing 2##AK222841|ABHD2|11057|abhydrolase domain containing 2##AK290340|ABHD2|11057|abhydrolase domain containing 2##AK223083|ABHD2|11057|abhydrolase domain containing 2##AK296827|ABHD2|11057|abhydrolase domain containing 2##BC090052|ABHD2|11057|abhydrolase domain containing 2##AF546700|ABHD2|11057|abhydrolase domain containing 2##BC019248|ABHD2|11057|abhydrolase domain containing 2##AL109729|ABHD2|11057|abhydrolase domain containing 2##AK312457|RLBP1|6017|retinaldehyde binding protein 1##BC004199|RLBP1|6017|retinaldehyde binding protein 1##NM_000326|RLBP1|6017|retinaldehyde binding protein 1##DQ980611|RLBP1|6017|retinaldehyde binding protein 1##NM_001113378|FANCI|55215|Fanconi anemia, complementation group I##NM_018193|FANCI|55215|Fanconi anemia, complementation group I##BC146804|FANCI|55215|Fanconi anemia, complementation group I	0.999331	CTCF.p2:0:0.999
chr17	60562460	60562588	reg1009245.p1	11.965	+	TSC_hg19_v1_chr17_+_60556483 NM_001112707 NM_006852 BC044925 AF162667 AX775745 AX775747	-5929	+	TSC_hg19_v1_chr17_+_60501257 NM_181725 BC006985 AB590991 AF161384 AK022822 AF161385	-61261	+	AK098684 NM_173503 BC101752 BC101778	-104598	+	TSC_hg19_v1_chr17_+_60704751 AB014609 BC153884 NM_006039	142233	+	BC146647 TSC_hg19_v1_chr17_+_60705048 AF134838	142521	+	TSC_hg19_v1_chr17_+_60705060 BC150212 AF107292 AB384513	142583	+	NM_001112707|TLK2|11011|tousled-like kinase 2##NM_006852|TLK2|11011|tousled-like kinase 2##BC044925|TLK2|11011|tousled-like kinase 2##AF162667|TLK2|11011|tousled-like kinase 2##NM_181725|METTL2A|339175|methyltransferase like 2A##BC006985|METTL2A|339175|methyltransferase like 2A##AF161384|METTL2A|339175|methyltransferase like 2A##AK022822|METTL2A|339175|methyltransferase like 2A##AF161385|METTL2A|339175|methyltransferase like 2A##AK098684|EFCAB3|146779|EF-hand calcium binding domain 3##NM_173503|EFCAB3|146779|EF-hand calcium binding domain 3##BC101752|EFCAB3|146779|EF-hand calcium binding domain 3##BC101778|EFCAB3|146779|EF-hand calcium binding domain 3##AB014609|MRC2|9902|mannose receptor, C type 2##BC153884|MRC2|9902|mannose receptor, C type 2##NM_006039|MRC2|9902|mannose receptor, C type 2##BC146647|MRC2|9902|mannose receptor, C type 2##AF134838|MRC2|9902|mannose receptor, C type 2##BC150212|MRC2|9902|mannose receptor, C type 2##AF107292|MRC2|9902|mannose receptor, C type 2	0.995474	CTCF.p2:0:0.995
chr10	29280811	29280912	reg1005129.p2	11.964	+	TSC_hg19_v1_chr10_+_28966451 NM_012342 AK290639 BC019252 AK223065 U23070	-314414	+	TSC_hg19_v1_chr10_+_28878692 BC010356	-402155	+	AB590052 AK297460 TSC_hg19_v1_chr10_+_28822585	-458315	+	NM_032517 BC021730 AY358694	297155	+	TSC_hg19_v1_chr10_+_29698475 BC066966 BC050354	417608	+	BC107795 AK056080 TSC_hg19_v1_chr10_+_29698485	417624	+	NM_012342|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK290639|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC019252|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK223065|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##U23070|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC010356|WAC|51322|WW domain containing adaptor with coiled-coil##AK297460|WAC|51322|WW domain containing adaptor with coiled-coil##NM_032517|LYZL1|84569|lysozyme-like 1##BC021730|LYZL1|84569|lysozyme-like 1##AY358694|LYZL1|84569|lysozyme-like 1##BC066966|LOC387647|387647|patched domain containing 3 pseudogene##BC050354|LOC387647|387647|patched domain containing 3 pseudogene##BC107795|LOC387647|387647|patched domain containing 3 pseudogene##AK056080|LOC387647|387647|patched domain containing 3 pseudogene	0.92297	CTCF.p2:1:0.923
chr11	125793064	125793187	reg1007447.p1	11.964	+	NM_013264 BC031098 BC050360 AK312772 TSC_hg19_v1_chr11_+_125774406 AK295121 BC035388	-18783	+	TSC_hg19_v1_chr11_-_125773094 AK055702 BC004822 AK314251 NM_031307	-20014	-	TSC_hg19_v1_chr11_+_125757594 BC015047	-35512	+	BC098583 NM_001243597 NM_016952	140061	-	CU680792 TSC_hg19_v1_chr11_-_126081542 AK027400 AK308059 AK225320 BC014131 NM_001144827 NM_032795	288434	-	NM_024556 TSC_hg19_v1_chr11_+_126081676 AK315615 AK024756 AK225081 BC001647	288537	+	NM_013264|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##BC031098|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##BC050360|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##AK312772|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##AK295121|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##BC035388|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##AK055702|PUS3|83480|pseudouridylate synthase 3##BC004822|PUS3|83480|pseudouridylate synthase 3##AK314251|PUS3|83480|pseudouridylate synthase 3##NM_031307|PUS3|83480|pseudouridylate synthase 3##BC015047|HYLS1|219844|hydrolethalus syndrome 1##BC098583|CDON|50937|Cdon homolog (mouse)##NM_001243597|CDON|50937|Cdon homolog (mouse)##NM_016952|CDON|50937|Cdon homolog (mouse)##AK027400|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##AK308059|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##AK225320|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##BC014131|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##NM_001144827|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##NM_032795|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##NM_024556|FAM118B|79607|family with sequence similarity 118, member B##AK315615|FAM118B|79607|family with sequence similarity 118, member B##AK024756|FAM118B|79607|family with sequence similarity 118, member B##AK225081|FAM118B|79607|family with sequence similarity 118, member B##BC001647|FAM118B|79607|family with sequence similarity 118, member B	0.962356	CTCF.p2:-13:0.962
chr13	46197759	46197924	reg1008213.p1	11.964	+	BC131494 AK057244 NM_182542	-7976	-	TSC_hg19_v1_chr13_+_46039081 NM_031431 AF349676 AF332595 AK026305 AK225466 AK225952 BX648211 AK294959 AK304248 AK314387 BC038953 CU691622	-158744	+	TSC_hg19_v1_chr13_-_45992486 BC132739 BC136760 BC144401 AK094133 AK095465 AK302967 NM_001010875	-205347	-	AK093129 AX747942 NM_152719	78604	+	AK096522 AB463764 BC041372 NM_198849	227959	-	BC019000 TSC_hg19_v1_chr13_-_46626864 AK056422 AY283618 NM_015070	429042	-	BC131494|FAM194B|220081|family with sequence similarity 194, member B##AK057244|FAM194B|220081|family with sequence similarity 194, member B##NM_182542|FAM194B|220081|family with sequence similarity 194, member B##NM_031431|COG3|83548|component of oligomeric golgi complex 3##AF349676|COG3|83548|component of oligomeric golgi complex 3##AF332595|COG3|83548|component of oligomeric golgi complex 3##AK026305|COG3|83548|component of oligomeric golgi complex 3##AK225466|COG3|83548|component of oligomeric golgi complex 3##AK225952|COG3|83548|component of oligomeric golgi complex 3##BX648211|COG3|83548|component of oligomeric golgi complex 3##AK294959|COG3|83548|component of oligomeric golgi complex 3##AK304248|COG3|83548|component of oligomeric golgi complex 3##AK314387|COG3|83548|component of oligomeric golgi complex 3##BC038953|COG3|83548|component of oligomeric golgi complex 3##BC132739|SLC25A30|253512|solute carrier family 25, member 30##BC136760|SLC25A30|253512|solute carrier family 25, member 30##BC144401|SLC25A30|253512|solute carrier family 25, member 30##AK094133|SLC25A30|253512|solute carrier family 25, member 30##AK095465|SLC25A30|253512|solute carrier family 25, member 30##AK302967|SLC25A30|253512|solute carrier family 25, member 30##NM_001010875|SLC25A30|253512|solute carrier family 25, member 30##AK093129|SPERT|220082|spermatid associated##NM_152719|SPERT|220082|spermatid associated##BC041372|SIAH3|283514|seven in absentia homolog 3 (Drosophila)##NM_198849|SIAH3|283514|seven in absentia homolog 3 (Drosophila)##BC019000|ZC3H13|23091|zinc finger CCCH-type containing 13##AK056422|ZC3H13|23091|zinc finger CCCH-type containing 13##AY283618|ZC3H13|23091|zinc finger CCCH-type containing 13##NM_015070|ZC3H13|23091|zinc finger CCCH-type containing 13	0.945327	CTCF.p2:-8:0.945
chr7	100161641	100161755	reg1006602.p1	11.964	+	TSC_hg19_v1_chr7_+_100136847 AK314954 BC017329 AB527774 CU675942	-24791	+	TSC_hg19_v1_chr7_+_100136826 NM_006076 BC009393	-24887	+	AK124773 NM_173564	-80149	+	NM_001168682	9571	-	AB528535 DQ893565 DQ894240 TSC_hg19_v1_chr7_-_100183751 AK074833 AK302410	22039	-	TSC_hg19_v1_chr7_-_100183753 BC018529 NM_002319	22077	-	AK314954|AGFG2|3268|ArfGAP with FG repeats 2##BC017329|AGFG2|3268|ArfGAP with FG repeats 2##NM_006076|AGFG2|3268|ArfGAP with FG repeats 2##BC009393|AGFG2|3268|ArfGAP with FG repeats 2##AK124773|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_173564|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_001168682|SAP25|100316904|Sin3A-associated protein, 25kDa##DQ893565|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##DQ894240|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##AK074833|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##AK302410|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##BC018529|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##NM_002319|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4	0.984437	CTCF.p2:0:0.984
chr8	10275392	10275511	reg1007794.p1	11.964	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	-322388	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	-363572	+	TSC_hg19_v1_chr8_+_9911765 AY958429	-363682	+	BC033497 NM_001197020 NM_198464 AY358867	107616	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	237189	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	254708	+	AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AY958429|MSRA|4482|methionine sulfoxide reductase A##BC033497|PRSS55|203074|protease, serine, 55##NM_001197020|PRSS55|203074|protease, serine, 55##NM_198464|PRSS55|203074|protease, serine, 55##AY358867|PRSS55|203074|protease, serine, 55##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74	0.853428	CTCF.p2:-14:0.853
chr8	107868844	107868976	reg1008869.p1	11.964	+	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	-86466	-	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	-130555	+	TSC_hg19_v1_chr8_+_107670114 AK292899 BC032710 BC019691	-198795	+	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	641278	-	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	1226964	-	AB527268 CR457029 CR542275 CU674376 CU677689 CU678957 DQ892278 DQ895478 BC000734 TSC_hg19_v1_chr8_-_109260938 U54562 U85947	1392024	-	AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AK292899|OXR1|55074|oxidation resistance 1##BC032710|OXR1|55074|oxidation resistance 1##BC019691|OXR1|55074|oxidation resistance 1##U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2##CR457029|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR542275|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ892278|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ895478|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC000734|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U54562|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U85947|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E	0.914751	CTCF.p2:7:0.915
chrX	3730157	3730278	reg1006631.p2	11.963	+	TSC_hg19_v1_chrX_-_3631668 NM_005044	-98499	-	TSC_hg19_v1_chrX_-_3631645 X85545	-98572	-	TSC_hg19_v1_chrX_-_3631619 BC041073	-98675	-	AB033086 AF376803 AX773938 NM_020742	2415670	-	AK055471 BC034018 NM_181332	2416463	-	AF167078 AF167079 NM_016379	2722941	-	NM_005044|PRKX|5613|protein kinase, X-linked##X85545|PRKX|5613|protein kinase, X-linked##BC041073|PRKX|5613|protein kinase, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A	0.0	
chr17	36891453	36891575	reg1006366.p2	11.962	+	TSC_hg19_v1_chr17_+_36886574 NM_001136498 AK097047 BC062294	-4882	+	TSC_hg19_v1_chr17_+_36861879 AK310435 AK310437 NM_005937 AB384930 CU687922 U07932 AB209633	-29624	+	TSC_hg19_v1_chr17_+_36861421 BC064612	-29915	+	TSC_hg19_v1_chr17_-_36904564 BC024255 NM_007144	13053	-	TSC_hg19_v1_chr17_-_36906030 BX647429	14535	-	TSC_hg19_v1_chr17_+_36909011 NM_002795 BC013008 BC002570 D26598	17516	+	NM_001136498|CISD3|284106|CDGSH iron sulfur domain 3##AK097047|CISD3|284106|CDGSH iron sulfur domain 3##BC062294|CISD3|284106|CDGSH iron sulfur domain 3##AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##BC064612|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##BC024255|PCGF2|7703|polycomb group ring finger 2##NM_007144|PCGF2|7703|polycomb group ring finger 2##BX647429|PCGF2|7703|polycomb group ring finger 2##NM_002795|PSMB3|5691|proteasome (prosome, macropain) subunit, beta type, 3##BC013008|PSMB3|5691|proteasome (prosome, macropain) subunit, beta type, 3##D26598|PSMB3|5691|proteasome (prosome, macropain) subunit, beta type, 3	0.998506	CTCF.p2:11:0.999
chr1	91367	91475	reg1006534.p1	11.962	+	NM_001005484	-22331	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-62016	-	None	None	None	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	276227	+	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	530621	-	TSC_hg19_v1_chr1_-_714015 BC006361	622596	-	NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene	0.925753	CTCF.p2:7:0.914
chr3	69459629	69459744	reg1006537.p2	11.962	+	NM_015123 BC057836	-24245	-	AB023230 TSC_hg19_v1_chr3_-_69435240	-24455	-	TSC_hg19_v1_chr3_-_69299315 AK295045	-160376	-	TSC_hg19_v1_chr3_-_69591738 AK091076	132071	-	TSC_hg19_v1_chr3_+_69788632 NM_198159 AK291318 AL110195 AB006909 AB527520	328967	+	TSC_hg19_v1_chr3_+_69812620 AK296129 NM_001184967	352977	+	NM_015123|FRMD4B|23150|FERM domain containing 4B##BC057836|FRMD4B|23150|FERM domain containing 4B##AB023230|FRMD4B|23150|FERM domain containing 4B##AK295045|FRMD4B|23150|FERM domain containing 4B##AK091076|FRMD4B|23150|FERM domain containing 4B##NM_198159|MITF|4286|microphthalmia-associated transcription factor##AK291318|MITF|4286|microphthalmia-associated transcription factor##AL110195|MITF|4286|microphthalmia-associated transcription factor##AB006909|MITF|4286|microphthalmia-associated transcription factor##AK296129|MITF|4286|microphthalmia-associated transcription factor##NM_001184967|MITF|4286|microphthalmia-associated transcription factor	0.60609	CTCF.p2:34:0.520
chr1	179339001	179339130	reg1007709.p1	11.961	+	BX647935 NM_144696 AK302972	-4201	+	TSC_hg19_v1_chr1_+_179262970 BC028940	-76077	+	AK026611 TSC_hg19_v1_chr1_+_179262936 AL833625	-76122	+	AJ279254 NM_014625 BC029141	206011	-	AK126889 NM_001199091 NM_001199085 NM_173533	221686	+	NM_001199089 AK127370 BC130532 BC144058	221941	+	BX647935|AXDND1|126859|axonemal dynein light chain domain containing 1##NM_144696|AXDND1|126859|axonemal dynein light chain domain containing 1##AK302972|AXDND1|126859|axonemal dynein light chain domain containing 1##BC028940|SOAT1|6646|sterol O-acyltransferase 1##AK026611|SOAT1|6646|sterol O-acyltransferase 1##AL833625|SOAT1|6646|sterol O-acyltransferase 1##AJ279254|NPHS2|7827|nephrosis 2, idiopathic, steroid-resistant (podocin)##NM_014625|NPHS2|7827|nephrosis 2, idiopathic, steroid-resistant (podocin)##BC029141|NPHS2|7827|nephrosis 2, idiopathic, steroid-resistant (podocin)##AK126889|TDRD5|163589|tudor domain containing 5##NM_001199091|TDRD5|163589|tudor domain containing 5##NM_001199085|TDRD5|163589|tudor domain containing 5##NM_173533|TDRD5|163589|tudor domain containing 5##NM_001199089|TDRD5|163589|tudor domain containing 5##AK127370|TDRD5|163589|tudor domain containing 5##BC130532|TDRD5|163589|tudor domain containing 5##BC144058|TDRD5|163589|tudor domain containing 5	0.992166	CTCF.p2:10:0.992
chr15	101168125	101168256	reg1006036.p1	11.961	+	NM_024708 NM_198243 TSC_hg19_v1_chr15_+_101142810 AK289860 BC063581 AF451994 AK026204 AK222958 AK222974 BC025252	-25395	+	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	-25781	-	BC034500 BC034970 NM_178842	-83293	-	TSC_hg19_v1_chr15_+_101390032 AK056534	221843	+	TSC_hg19_v1_chr15_+_101420006 NM_000693	251816	+	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	251881	+	NM_024708|ASB7|140460|ankyrin repeat and SOCS box containing 7##NM_198243|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK289860|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC063581|ASB7|140460|ankyrin repeat and SOCS box containing 7##AF451994|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK026204|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222958|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222974|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC025252|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK056534|LOC145757|145757|uncharacterized LOC145757##NM_000693|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3	0.99973	CTCF.p2:3:1.000
chr5	38810034	38810156	reg1007274.p1	11.960	+	AK308158 AK309882 NM_002310	-214589	-	TSC_hg19_v1_chr5_-_38556749 AK290059 NM_001127671	-253367	-	NM_182801 BC033177 AK092994 AX747843 BC033188	-364471	+	NM_001168355 TSC_hg19_v1_chr5_+_38845959	35864	+	TSC_hg19_v1_chr5_+_38846113 NM_003999 BC010943 U60805 AK304016 BC063468	35979	+	TSC_hg19_v1_chr5_+_38846260 BC125209 BC125210	36200	+	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha##AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha##AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_182801|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033177|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK092994|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033188|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_001168355|OSMR|9180|oncostatin M receptor##NM_003999|OSMR|9180|oncostatin M receptor##BC010943|OSMR|9180|oncostatin M receptor##U60805|OSMR|9180|oncostatin M receptor##AK304016|OSMR|9180|oncostatin M receptor##BC063468|OSMR|9180|oncostatin M receptor##BC125209|OSMR|9180|oncostatin M receptor##BC125210|OSMR|9180|oncostatin M receptor	0.0	
chrX	13916318	13916470	reg1008563.p1	11.960	+	NM_001001995 NM_001001996 NM_005278 TSC_hg19_v1_chrX_-_13835315	-81079	-	TSC_hg19_v1_chrX_-_13835213 AK095657	-81172	-	AK299675 BC047295 TSC_hg19_v1_chrX_-_13835202	-81199	-	BC012459 TSC_hg19_v1_chrX_-_13956504	40080	-	TSC_hg19_v1_chrX_-_13956533 AK294314	40137	-	TSC_hg19_v1_chrX_-_13956758 AB209525 U45955 NM_001001994	40434	-	NM_001001995|GPM6B|2824|glycoprotein M6B##NM_001001996|GPM6B|2824|glycoprotein M6B##NM_005278|GPM6B|2824|glycoprotein M6B##AK095657|GPM6B|2824|glycoprotein M6B##AK299675|GPM6B|2824|glycoprotein M6B##BC047295|GPM6B|2824|glycoprotein M6B##AK294314|GPM6B|2824|glycoprotein M6B##AB209525|GPM6B|2824|glycoprotein M6B##U45955|GPM6B|2824|glycoprotein M6B##NM_001001994|GPM6B|2824|glycoprotein M6B	0.849228	CTCF.p2:-21:0.849
chr11	9770095	9770276	reg1007107.p1	11.959	+	TSC_hg19_v1_chr11_+_9685669 AB014540 BC000134 CU674300 AF210818 AK304104	-84479	+	BC000616 TSC_hg19_v1_chr11_+_9685651 AF134894	-84534	+	TSC_hg19_v1_chr11_+_9685627 NM_015055	-84549	+	AK098060 TSC_hg19_v1_chr11_+_9779882	9677	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	545581	-	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	556444	+	AB014540|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000134|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF210818|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AK304104|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000616|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF134894|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##NM_015055|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AK098060|LOC283104|283104|uncharacterized LOC283104##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin	0.935302	CTCF.p2:33:0.884
chrX	114972412	114972575	reg1006605.p1	11.959	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-144625	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-175451	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-176887	+	BC003645 TSC_hg19_v1_chrX_-_115085443	112946	-	AK313927 NM_000686 X87723 U16957	329502	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	595274	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:20:0.429
chr17	27507413	27507520	reg1006514.p1	11.958	+	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	-116	-	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	-40055	-	AK054958 NM_004740	-104840	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	66411	+	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	113644	-	TSC_hg19_v1_chr17_-_27621167 AK293075 NM_020772	113699	-	CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2	0.049857	
chr19	41710307	41710416	reg1006615.p1	11.957	+	TSC_hg19_v1_chr19_+_41699143 AK296087 BC033691 AF335278 CU689700 DQ893363 DQ896681	-11198	+	TSC_hg19_v1_chr19_+_41699123 AK027605 NM_030622 AY358603	-11257	+	AK296884 AK298082 AK316498 J02906 NM_000774 BC109057 BC109056	-90014	+	TSC_hg19_v1_chr19_+_41725118 NM_001699 NM_021913	14750	+	TSC_hg19_v1_chr19_+_41725131 BC032229	14771	+	TSC_hg19_v1_chr19_+_41725146 M76125	14785	+	AK296087|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##BC033691|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AF335278|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##DQ893363|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##DQ896681|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AK027605|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##NM_030622|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AY358603|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AK298082|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##AK316498|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##J02906|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##NM_000774|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##BC109057|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##BC109056|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##NM_001699|AXL|558|AXL receptor tyrosine kinase##NM_021913|AXL|558|AXL receptor tyrosine kinase##BC032229|AXL|558|AXL receptor tyrosine kinase##M76125|AXL|558|AXL receptor tyrosine kinase	0.223429	CTCF.p2:4:0.210
chr2	223836560	223836674	reg1006414.p1	11.957	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	-110870	+	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	-300208	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	-315823	-	NM_080671 TSC_hg19_v1_chr2_+_223916907 DQ192293 AK313203 BC014429 AY065987	80280	+	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	630449	-	TSC_hg19_v1_chr2_-_224467100 BC022509	630490	-	NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_080671|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##DQ192293|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AK313203|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##BC014429|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AY065987|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II##BC022509|SCG2|7857|secretogranin II	0.948607	CTCF.p2:-11:0.914
chr11	77711300	77711435	reg1009098.p1	11.956	+	BC009995 TSC_hg19_v1_chr11_-_77705714 AK290866 BC015664 NM_033547	-5652	-	AL834171 EU446555 TSC_hg19_v1_chr11_-_77705710 CU679559 AK000455 BC018672	-5683	-	TSC_hg19_v1_chr11_+_77532238 AF092136 AK024688 BC002752 NM_024684	-179164	+	BC001062 BC001929 NM_023930	22935	-	TSC_hg19_v1_chr11_+_77774906 AK311975 NM_003251 BC031989 EU447014	63546	+	CR533448 AB528753 AM392713 TSC_hg19_v1_chr11_-_77790909 AK022785 AF087659 AF369951 AK098173 AL050278 AF369952 AK023013 AF070652 BC007323	79507	-	BC009995|INTS4|92105|integrator complex subunit 4##AK290866|INTS4|92105|integrator complex subunit 4##BC015664|INTS4|92105|integrator complex subunit 4##NM_033547|INTS4|92105|integrator complex subunit 4##AL834171|INTS4|92105|integrator complex subunit 4##EU446555|INTS4|92105|integrator complex subunit 4##AK000455|INTS4|92105|integrator complex subunit 4##BC018672|INTS4|92105|integrator complex subunit 4##AF092136|C11orf67|28971|chromosome 11 open reading frame 67##AK024688|C11orf67|28971|chromosome 11 open reading frame 67##BC002752|C11orf67|28971|chromosome 11 open reading frame 67##NM_024684|C11orf67|28971|chromosome 11 open reading frame 67##BC001062|KCTD14|65987|potassium channel tetramerisation domain containing 14##BC001929|KCTD14|65987|potassium channel tetramerisation domain containing 14##NM_023930|KCTD14|65987|potassium channel tetramerisation domain containing 14##AK311975|THRSP|7069|thyroid hormone responsive##NM_003251|THRSP|7069|thyroid hormone responsive##BC031989|THRSP|7069|thyroid hormone responsive##EU447014|THRSP|7069|thyroid hormone responsive##CR533448|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AM392713|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AK022785|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF087659|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF369951|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AK098173|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AL050278|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF369952|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AK023013|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF070652|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##BC007323|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa	0.999794	CTCF.p2:-4:1.000
chr19	1929424	1929537	reg1006247.p1	11.956	+	TSC_hg19_v1_chr19_+_1905397 AK074967 AK126544 AK307641 BC016509 BC062598 AK307700 AK092056 AX747336 BC011747 BC011824 NM_138422	-24075	+	TSC_hg19_v1_chr19_+_1905370 AK074586 NM_079834	-24128	+	TSC_hg19_v1_chr19_-_1885489 AK289533 BC035961 AK074548 NM_001130111 NM_031213	-43976	-	TSC_hg19_v1_chr19_+_1941164 NM_001319	11683	+	TSC_hg19_v1_chr19_+_1941192 BC018693 BC018699	11708	+	TSC_hg19_v1_chr19_-_2015708 AB527352 AF355797 NM_017797 AK225831	86190	-	AK074967|SCAMP4|113178|secretory carrier membrane protein 4##AK307641|SCAMP4|113178|secretory carrier membrane protein 4##BC016509|SCAMP4|113178|secretory carrier membrane protein 4##BC062598|SCAMP4|113178|secretory carrier membrane protein 4##AK307700|SCAMP4|113178|secretory carrier membrane protein 4##AK092056|SCAMP4|113178|secretory carrier membrane protein 4##BC011747|SCAMP4|113178|secretory carrier membrane protein 4##BC011824|ADAT3|113179|adenosine deaminase, tRNA-specific 3##NM_138422|ADAT3|113179|adenosine deaminase, tRNA-specific 3##AK074586|SCAMP4|113178|secretory carrier membrane protein 4##NM_079834|SCAMP4|113178|secretory carrier membrane protein 4##AK289533|FAM108A1|81926|family with sequence similarity 108, member A1##BC035961|FAM108A1|81926|family with sequence similarity 108, member A1##AK074548|FAM108A1|81926|family with sequence similarity 108, member A1##NM_001130111|FAM108A1|81926|family with sequence similarity 108, member A1##NM_031213|FAM108A1|81926|family with sequence similarity 108, member A1##NM_001319|CSNK1G2|1455|casein kinase 1, gamma 2##BC018693|CSNK1G2|1455|casein kinase 1, gamma 2##BC018699|CSNK1G2|1455|casein kinase 1, gamma 2##AF355797|BTBD2|55643|BTB (POZ) domain containing 2##NM_017797|BTBD2|55643|BTB (POZ) domain containing 2##AK225831|BTBD2|55643|BTB (POZ) domain containing 2	0.986869	CTCF.p2:5:0.987
chr2	76014809	76014940	reg1008838.p1	11.956	+	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-76823	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-77155	-	TSC_hg19_v1_chr2_+_75873908 NM_014763 AK295578 AK291250 BC030144 CU688824 AB463123 BC021051 D14660 DQ892303 DQ895502	-140936	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	1734544	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	3237964	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	3300259	-	BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_014763|MRPL19|9801|mitochondrial ribosomal protein L19##AK295578|MRPL19|9801|mitochondrial ribosomal protein L19##AK291250|MRPL19|9801|mitochondrial ribosomal protein L19##BC030144|MRPL19|9801|mitochondrial ribosomal protein L19##BC021051|MRPL19|9801|mitochondrial ribosomal protein L19##D14660|MRPL19|9801|mitochondrial ribosomal protein L19##DQ892303|MRPL19|9801|mitochondrial ribosomal protein L19##DQ895502|MRPL19|9801|mitochondrial ribosomal protein L19##BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta	0.991845	CTCF.p2:-31:0.992
chr8	59634348	59634468	reg1006069.p1	11.956	+	NM_003580 TSC_hg19_v1_chr8_-_59572413	-61997	-	BC041124 TSC_hg19_v1_chr8_-_59572386	-62022	-	TSC_hg19_v1_chr8_-_59572336 AK292679 AK313991	-62095	-	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	397264	-	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	1559513	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	1795032	+	NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC041124|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##AK292679|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##AK313991|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family	0.999415	CTCF.p2:-15:0.999
chr11	126180499	126180639	reg1008530.p1	11.954	+	TSC_hg19_v1_chr11_+_126173954 AK307403 BC014532 AF077201 CU677035 AY077684	-6600	+	TSC_hg19_v1_chr11_+_126173950 AY040771 AK026554 AK223089	-6623	+	AF532613 NM_014026	-6923	+	TSC_hg19_v1_chr11_-_126225452 AK096370	44894	-	NM_006278 X74570	45526	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	95429	+	AK307403|DCPS|28960|decapping enzyme, scavenger##BC014532|DCPS|28960|decapping enzyme, scavenger##AF077201|DCPS|28960|decapping enzyme, scavenger##AY077684|DCPS|28960|decapping enzyme, scavenger##AY040771|DCPS|28960|decapping enzyme, scavenger##AK026554|DCPS|28960|decapping enzyme, scavenger##AK223089|DCPS|28960|decapping enzyme, scavenger##AF532613|DCPS|28960|decapping enzyme, scavenger##NM_014026|DCPS|28960|decapping enzyme, scavenger##AK096370|FLJ39051|399972|uncharacterized LOC399972##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	1.016813	CTCF.p2:-5:0.999
chr1	26123422	26123549	reg1008337.p1	11.954	+	AB209275 TSC_hg19_v1_chr1_+_25944698	-178830	+	AF261655 NM_020379	-179527	+	TSC_hg19_v1_chr1_+_25870146 BC029770 AL117654 AB528624	-253321	+	TSC_hg19_v1_chr1_+_26126678 AJ306399 NM_020451 NM_206926	3183	+	TSC_hg19_v1_chr1_+_26146429 NM_001099625 NM_001099627 BX647921	22925	+	TSC_hg19_v1_chr1_+_26146468 AB075880 AK314297 AK299221 AF173891	22986	+	AB209275|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##BC029770|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AL117654|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AJ306399|SEPN1|57190|selenoprotein N, 1##NM_020451|SEPN1|57190|selenoprotein N, 1##NM_206926|SEPN1|57190|selenoprotein N, 1##NM_001099625|FAM54B|56181|family with sequence similarity 54, member B##NM_001099627|FAM54B|56181|family with sequence similarity 54, member B##BX647921|FAM54B|56181|family with sequence similarity 54, member B##AB075880|FAM54B|56181|family with sequence similarity 54, member B##AK314297|FAM54B|56181|family with sequence similarity 54, member B##AK299221|FAM54B|56181|family with sequence similarity 54, member B##AF173891|FAM54B|56181|family with sequence similarity 54, member B	0.807847	CTCF.p2:18:0.808
chr17	27230105	27230286	reg1005379.p2	11.954	+	AX795344 TSC_hg19_v1_chr17_-_27229986 AX795345 AX795340 AX795338 AX795342 BC015582 AX795337 AX795341 AX795339 AX795335 AX795336 AK296017 AX795346 AX795343 AY358566 NM_144683	-190	-	TSC_hg19_v1_chr17_-_27224717 NM_004475	-5483	-	M60922 CU678570 AB528533 BC003683 TSC_hg19_v1_chr17_-_27224641	-5587	-	TSC_hg19_v1_chr17_-_27240983 AK024290	10818	-	BC110882 TSC_hg19_v1_chr17_-_27278336	48135	-	TSC_hg19_v1_chr17_-_27278483 AY030283 NM_001033561 NM_020889	48301	-	BC015582|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AK296017|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AY358566|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##NM_144683|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##NM_004475|FLOT2|2319|flotillin 2##M60922|FLOT2|2319|flotillin 2##BC003683|FLOT2|2319|flotillin 2##AK024290|PHF12|57649|PHD finger protein 12##BC110882|PHF12|57649|PHD finger protein 12##AY030283|PHF12|57649|PHD finger protein 12##NM_001033561|PHF12|57649|PHD finger protein 12##NM_020889|PHF12|57649|PHD finger protein 12	0.0	
chr5	148113277	148113398	reg1008088.p1	11.954	+	AK308471 TSC_hg19_v1_chr5_-_148034091	-79247	-	AJ131724 TSC_hg19_v1_chr5_-_148033739 NM_000870	-79610	-	AJ633645 AM712912 Y10437 Y13584 AJ011371 BC095497 Y09586 AJ131725 AJ131726 AJ278979 AJ278980 AJ278981 AJ278982 Y08756 Y12505 Y12506 Y12507 AJ519673 BC074755 NM_001040169 NM_001040172 NM_001040173 NM_199453	-96738	-	NM_000024 TSC_hg19_v1_chr5_+_148206185 AK313151 BC012481 AK223025 BC073856 BC063486 X04827	92849	+	AB075865 AL832651 AK300420 TSC_hg19_v1_chr5_-_148442626 BC113879 BC114486 AY341075 AB070620 NM_024577	329334	-	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	407853	+	AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131724|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000870|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface##X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface##AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3	0.978551	CTCF.p2:-6:0.979
chr6	52516983	52517100	reg1006474.p1	11.954	+	AK095117 TSC_hg19_v1_chr6_+_52442225	-74867	+	TSC_hg19_v1_chr6_-_52441859 AK291751 AB621814 BC028121 NM_012288	-75190	-	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	-75283	-	TSC_hg19_v1_chr6_+_52529228 AK091117	12187	+	TSC_hg19_v1_chr6_+_52535913 NM_014051 AF239771 AK312063 BC015097 BC019328	18882	+	AK292602 AK313601 M16594 BC002895 NM_000846	111275	-	AK095117|FLJ37798|401264|uncharacterized LOC401264##AK291751|TRAM2|9697|translocation associated membrane protein 2##BC028121|TRAM2|9697|translocation associated membrane protein 2##NM_012288|TRAM2|9697|translocation associated membrane protein 2##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2##AK091117|LOC730101|730101|uncharacterized LOC730101##NM_014051|TMEM14A|28978|transmembrane protein 14A##AF239771|TMEM14A|28978|transmembrane protein 14A##AK312063|TMEM14A|28978|transmembrane protein 14A##BC015097|TMEM14A|28978|transmembrane protein 14A##BC019328|TMEM14A|28978|transmembrane protein 14A##AK292602|GSTA2|2939|glutathione S-transferase alpha 2##AK313601|GSTA2|2939|glutathione S-transferase alpha 2##M16594|GSTA2|2939|glutathione S-transferase alpha 2##BC002895|GSTA2|2939|glutathione S-transferase alpha 2##NM_000846|GSTA2|2939|glutathione S-transferase alpha 2	0.86525	CTCF.p2:-14:0.865
chr17	64563430	64563558	reg1006606.p1	11.953	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	-264567	+	TSC_hg19_v1_chr17_+_64298733 BC053321	-264744	+	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	-337969	-	AK290171 TSC_hg19_v1_chr17_+_64831234	267741	+	BC101633 NM_145811 BC101607 AF361351 AF458898	309926	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	397395	+	NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##BC053321|PRKCA|5578|protein kinase C, alpha##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	0.98711	CTCF.p2:18:0.987
chr19	48292129	48292274	reg1009671.p1	11.953	+	NM_003009 TSC_hg19_v1_chr19_+_48281965 BC039597 BC032546 BC047893 BC000581 U67171 AF015283	-10275	+	TSC_hg19_v1_chr19_+_48248802 AK303180 AK297877 AK303918 AK309788 AK301117 AF182076 BC006311 BC013203 AY535000 CU679611 DQ892724 DQ895973 AK024486 BC013235 BC013307 BC014009 BC039869 BC007248 BC004229 AF296124 AL359336 AL359335	-43366	+	NM_015710 TSC_hg19_v1_chr19_+_48248797	-43407	+	BC137501 BC141863 BC144673 AK097640 NM_198479	14636	-	NM_000554 DQ426868 BC016664 DQ426867 BC053672	32954	+	CU676700 DQ891165 DQ894346 U08024 L20000 X70222 TSC_hg19_v1_chr19_-_48389554 X84816 U08025	97337	-	NM_003009|SEPW1|6415|selenoprotein W, 1##BC039597|SEPW1|6415|selenoprotein W, 1##BC032546|SEPW1|6415|selenoprotein W, 1##BC047893|SEPW1|6415|selenoprotein W, 1##BC000581|SEPW1|6415|selenoprotein W, 1##U67171|SEPW1|6415|selenoprotein W, 1##AF015283|SEPW1|6415|selenoprotein W, 1##AK297877|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK303918|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK309788|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK301117|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF182076|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC006311|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013203|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AY535000|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ892724|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ895973|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK024486|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013235|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013307|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC014009|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC039869|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC007248|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC004229|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF296124|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359336|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359335|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##NM_015710|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC137501|TPRX1|284355|tetra-peptide repeat homeobox 1##BC141863|TPRX1|284355|tetra-peptide repeat homeobox 1##BC144673|TPRX1|284355|tetra-peptide repeat homeobox 1##AK097640|TPRX1|284355|tetra-peptide repeat homeobox 1##NM_198479|TPRX1|284355|tetra-peptide repeat homeobox 1##NM_000554|CRX|1406|cone-rod homeobox##DQ426868|CRX|1406|cone-rod homeobox##BC016664|CRX|1406|cone-rod homeobox##DQ426867|CRX|1406|cone-rod homeobox##BC053672|CRX|1406|cone-rod homeobox##DQ891165|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ894346|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08024|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L20000|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X70222|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X84816|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08025|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	0.0	
chr6	142310515	142310642	reg1006407.p1	11.953	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-2614794	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-2614817	-	NM_001168389 NM_001168388	-2615155	-	BC095542 GU727635 M73482 NM_002511	99286	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	157812	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	157828	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.983936	CTCF.p2:0:0.984
chr5	99766117	99766242	reg1006067.p1	11.952	+	BC054860 BC117134 NM_001270 AF006513	-1503951	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-1661138	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-3247192	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	104894	+	AF529367 TSC_hg19_v1_chr5_+_99871306	105091	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	472749	-	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.761974	CTCF.p2:3:0.762
chr19	11908356	11908472	reg1005620.p1	11.950	+	NM_152355 TSC_hg19_v1_chr19_+_11877884 AK095956	-30554	+	X51760 BC052597 AK308189 NM_001080493 AK300579 AK303213	-58656	-	NM_145295 BC098416 AK095639 BC006279 AK074846 BC069232	-200123	+	AK297479 NM_152356 AK096593	965	+	TSC_hg19_v1_chr19_+_11925098 AK095252 NM_152357 BC035760	16692	+	AL833935 NM_152262	68429	+	NM_152355|ZNF441|126068|zinc finger protein 441##AK095956|ZNF441|126068|zinc finger protein 441##X51760|ZNF823|55552|zinc finger protein 823##BC052597|ZNF823|55552|zinc finger protein 823##AK308189|ZNF823|55552|zinc finger protein 823##NM_001080493|ZNF823|55552|zinc finger protein 823##AK300579|ZNF823|55552|zinc finger protein 823##AK303213|ZNF823|55552|zinc finger protein 823##NM_145295|ZNF627|199692|zinc finger protein 627##BC098416|ZNF627|199692|zinc finger protein 627##AK095639|ZNF627|199692|zinc finger protein 627##BC006279|ZNF627|199692|zinc finger protein 627##AK074846|ZNF627|199692|zinc finger protein 627##BC069232|ZNF627|199692|zinc finger protein 627##AK297479|ZNF491|126069|zinc finger protein 491##NM_152356|ZNF491|126069|zinc finger protein 491##AK096593|ZNF491|126069|zinc finger protein 491##AK095252|ZNF440|126070|zinc finger protein 440##NM_152357|ZNF440|126070|zinc finger protein 440##BC035760|ZNF440|126070|zinc finger protein 440##AL833935|ZNF439|90594|zinc finger protein 439##NM_152262|ZNF439|90594|zinc finger protein 439	1.148328	CTCF.p2:-2:0.995
chr20	1484397	1484538	reg1007095.p1	11.950	+	AK097113 TSC_hg19_v1_chr20_-_1472172 NM_001122962 NM_001134836	-12267	-	AK297072 TSC_hg19_v1_chr20_-_1472142	-12333	-	AY424277 AK095499 AK294440 TSC_hg19_v1_chr20_-_1472067	-12432	-	DQ891297 EU176577 BC033502 NM_178460	53855	-	AB590891 CU692960 BC131747 Y10376 BC025286 BC075835 TSC_hg19_v1_chr20_-_1600656 AK289866 AK313517 BX537992 NM_001083910 NM_001135844 NM_006065	116171	-	AY748247 AY748248 CU687894 BC064532 BC020629 AK292745 NM_001039508 NM_018556 NM_080816	153924	-	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2##NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2##AK297072|SIRPB2|284759|signal-regulatory protein beta 2##AY424277|SIRPB2|284759|signal-regulatory protein beta 2##AK095499|SIRPB2|284759|signal-regulatory protein beta 2##AK294440|SIRPB2|284759|signal-regulatory protein beta 2##DQ891297|SIRPD|128646|signal-regulatory protein delta##EU176577|SIRPD|128646|signal-regulatory protein delta##BC033502|SIRPD|128646|signal-regulatory protein delta##NM_178460|SIRPD|128646|signal-regulatory protein delta##BC131747|SIRPB1|10326|signal-regulatory protein beta 1##Y10376|SIRPB1|10326|signal-regulatory protein beta 1##BC025286|SIRPB1|10326|signal-regulatory protein beta 1##BC075835|SIRPB1|10326|signal-regulatory protein beta 1##AK289866|SIRPB1|10326|signal-regulatory protein beta 1##BX537992|SIRPB1|10326|signal-regulatory protein beta 1##NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1##NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1##NM_006065|SIRPB1|10326|signal-regulatory protein beta 1##AY748247|SIRPG|55423|signal-regulatory protein gamma##AY748248|SIRPG|55423|signal-regulatory protein gamma##BC064532|SIRPG|55423|signal-regulatory protein gamma##BC020629|SIRPG|55423|signal-regulatory protein gamma##AK292745|SIRPG|55423|signal-regulatory protein gamma##NM_001039508|SIRPG|55423|signal-regulatory protein gamma##NM_018556|SIRPG|55423|signal-regulatory protein gamma##NM_080816|SIRPG|55423|signal-regulatory protein gamma	0.357972	CTCF.p2:-34:0.358
chr13	98227298	98227402	reg1007346.p1	11.949	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	-140648	+	TSC_hg19_v1_chr13_+_98086350 AK315139 NM_021033 BC041333	-140913	+	TSC_hg19_v1_chr13_+_97999294 AF339832	-228056	+	NM_002271 BC045640	378587	+	TSC_hg19_v1_chr13_+_98628928 BX648222 AK303494 AK225286 BC001497 BC019309 DQ893033 EU176755 U72761	401482	+	TSC_hg19_v1_chr13_+_98795412 NM_001001715 NM_005766	568071	+	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family##AK315139|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_021033|RAP2A|5911|RAP2A, member of RAS oncogene family##BC041333|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_002271|IPO5|3843|importin 5##BC045640|IPO5|3843|importin 5##BX648222|IPO5|3843|importin 5##AK303494|IPO5|3843|importin 5##AK225286|IPO5|3843|importin 5##BC001497|IPO5|3843|importin 5##BC019309|IPO5|3843|importin 5##DQ893033|IPO5|3843|importin 5##EU176755|IPO5|3843|importin 5##U72761|IPO5|3843|importin 5##NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	0.0	
chr14	77767513	77767641	reg1006401.p2	11.949	+	TSC_hg19_v1_chr14_-_77737552 AF422797 NM_021257	-29976	-	TSC_hg19_v1_chr14_+_77648137 AK125159 BC136613 BC136614	-119404	+	TSC_hg19_v1_chr14_+_77648082 NM_020431	-119485	+	CU689220 AB209114 BC031651 TSC_hg19_v1_chr14_-_77787215 BX248027 AF105020 AY090480 NM_013382	19553	-	NM_145870 NM_145871 AK315154 BC001453 TSC_hg19_v1_chr14_+_77787378 AK309054 AK315609 BC052245 BC069047 AJ001838 U86529 CR456987	19793	+	NM_001513	20128	+	AF422797|NGB|58157|neuroglobin##NM_021257|NGB|58157|neuroglobin##AK125159|TMEM63C|57156|transmembrane protein 63C##BC136613|TMEM63C|57156|transmembrane protein 63C##BC136614|TMEM63C|57156|transmembrane protein 63C##NM_020431|TMEM63C|57156|transmembrane protein 63C##AB209114|POMT2|29954|protein-O-mannosyltransferase 2##BC031651|POMT2|29954|protein-O-mannosyltransferase 2##BX248027|POMT2|29954|protein-O-mannosyltransferase 2##AF105020|POMT2|29954|protein-O-mannosyltransferase 2##AY090480|POMT2|29954|protein-O-mannosyltransferase 2##NM_013382|POMT2|29954|protein-O-mannosyltransferase 2##NM_145870|GSTZ1|2954|glutathione transferase zeta 1##NM_145871|GSTZ1|2954|glutathione transferase zeta 1##AK315154|GSTZ1|2954|glutathione transferase zeta 1##BC001453|GSTZ1|2954|glutathione transferase zeta 1##AK309054|GSTZ1|2954|glutathione transferase zeta 1##AK315609|GSTZ1|2954|glutathione transferase zeta 1##BC052245|GSTZ1|2954|glutathione transferase zeta 1##AJ001838|GSTZ1|2954|glutathione transferase zeta 1##U86529|GSTZ1|2954|glutathione transferase zeta 1##CR456987|GSTZ1|2954|glutathione transferase zeta 1##NM_001513|GSTZ1|2954|glutathione transferase zeta 1	0.995214	CTCF.p2:0:0.995
chr15	65590156	65590285	reg1006933.p1	11.949	+	BC006389 NM_017851 TSC_hg19_v1_chr15_-_65579223 AK000516	-11060	-	BC035776 AF035408 AY358904 AK225652 AK225926 AK313352 TSC_hg19_v1_chr15_-_65503811 NM_003613	-86408	-	TSC_hg19_v1_chr15_-_65477676 AL136922 AK308133 AK292316 AK310614	-112534	-	BC042054 TSC_hg19_v1_chr15_-_65670341 BC067107 NM_004884	80131	-	TSC_hg19_v1_chr15_-_65715258 AB529157	125025	-	TSC_hg19_v1_chr15_-_65715412 AB052622 NM_020962	125181	-	BC006389|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##NM_017851|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##AK000516|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##BC035776|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AF035408|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AY358904|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225652|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225926|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK313352|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##NM_003613|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AL136922|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK308133|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK292316|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK310614|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##AB052622|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##NM_020962|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4	0.903178	CTCF.p2:10:0.903
chr16	2918482	2918629	reg1008980.p1	11.948	+	CU679465 AB010779 AF321182 BC009726 AY358396 NM_022119	-10418	-	NM_145252 AY359021 JN411265 BC009722 AB528168 AM392915 AM393869 EF067313 AK311810	-38317	+	BC074999 BC075000 TSC_hg19_v1_chr16_+_2867242 AY359034 AF058300 AB031329 AB031330	-51309	+	NM_001142499 NM_001142500 NM_138439 TSC_hg19_v1_chr16_+_2933215 BC014089	14701	+	TSC_hg19_v1_chr16_+_2961983 BC028572 NM_020912 NM_032296	43409	+	TSC_hg19_v1_chr16_+_2961994 AB046772	43442	+	AB010779|PRSS22|64063|protease, serine, 22##AF321182|PRSS22|64063|protease, serine, 22##BC009726|PRSS22|64063|protease, serine, 22##AY358396|PRSS22|64063|protease, serine, 22##NM_022119|PRSS22|64063|protease, serine, 22##NM_145252|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AY359021|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##JN411265|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC009722|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM392915|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM393869|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##EF067313|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AK311810|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC074999|PRSS21|10942|protease, serine, 21 (testisin)##BC075000|PRSS21|10942|protease, serine, 21 (testisin)##AY359034|PRSS21|10942|protease, serine, 21 (testisin)##AF058300|PRSS21|10942|protease, serine, 21 (testisin)##AB031329|PRSS21|10942|protease, serine, 21 (testisin)##AB031330|PRSS21|10942|protease, serine, 21 (testisin)##NM_001142499|FLYWCH2|114984|FLYWCH family member 2##NM_001142500|FLYWCH2|114984|FLYWCH family member 2##NM_138439|FLYWCH2|114984|FLYWCH family member 2##BC014089|FLYWCH2|114984|FLYWCH family member 2##BC028572|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_020912|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_032296|FLYWCH1|84256|FLYWCH-type zinc finger 1##AB046772|FLYWCH1|84256|FLYWCH-type zinc finger 1	0.979052	CTCF.p2:-5:0.979
chr9	43133724	43133859	reg1007392.p1	11.948	+	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-304	-	NM_001099279 NM_199244	-416558	+	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	-765433	+	NM_001145196	496938	-	TSC_hg19_v1_chr9_+_43684876 NM_001201380	551052	+	TSC_hg19_v1_chr9_+_45441926 BC006438	2308135	+	AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##BC006438|LOC100132167|100132167|uncharacterized LOC100132167	0.757112	CTCF.p2:29:0.757
chr17	45078625	45078743	reg1006676.p1	11.947	+	BC108690 BC033942 NM_203400	-22084	-	TSC_hg19_v1_chr17_+_45000525 AK303650 AK290890 BC009710 AF229796 BC034762 CU679451 AF007548 DQ891461 DQ894638	-78139	+	TSC_hg19_v1_chr17_+_45000492 NM_001012511 NM_004287 NM_054022	-78197	+	CU679998 AB384784 DQ892780 DQ896027 BC011656 DQ786193 TSC_hg19_v1_chr17_-_45266619 U00001 AK296881 S78234	187894	-	TSC_hg19_v1_chr17_-_45266641 AK299342	187955	-	NM_001114091 NM_001256 TSC_hg19_v1_chr17_-_45266669	188000	-	BC108690|RPRML|388394|reprimo-like##BC033942|RPRML|388394|reprimo-like##NM_203400|RPRML|388394|reprimo-like##AK290890|GOSR2|9570|golgi SNAP receptor complex member 2##BC009710|GOSR2|9570|golgi SNAP receptor complex member 2##AF229796|GOSR2|9570|golgi SNAP receptor complex member 2##BC034762|GOSR2|9570|golgi SNAP receptor complex member 2##AF007548|GOSR2|9570|golgi SNAP receptor complex member 2##DQ891461|GOSR2|9570|golgi SNAP receptor complex member 2##DQ894638|GOSR2|9570|golgi SNAP receptor complex member 2##NM_001012511|GOSR2|9570|golgi SNAP receptor complex member 2##NM_004287|GOSR2|9570|golgi SNAP receptor complex member 2##NM_054022|GOSR2|9570|golgi SNAP receptor complex member 2##DQ892780|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##DQ896027|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##BC011656|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##DQ786193|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##U00001|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##AK296881|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##S78234|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##AK299342|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##NM_001114091|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##NM_001256|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)	0.97007	CTCF.p2:-5:0.970
chr2	230138570	230138703	reg1006789.p1	11.947	+	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	-2631	-	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-1092274	-	AK097409 NM_178821 BC036377 AK098821 AK301861	-1402284	+	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	440612	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	648025	-	TSC_hg19_v1_chr2_-_230786712 AK310971	648113	-	AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12	0.596289	CTCF.p2:7:0.596
chr10	54644144	54644273	reg1006258.p1	11.946	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-112782	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-570093	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-1184861	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	1916790	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	2714566	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	3476806	-	AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor	0.180871	
chr15	74924417	74924534	reg1008202.p1	11.946	+	AK293769 TSC_hg19_v1_chr15_+_74908195 BC019881 CR933693 AK291983 AK301689 BC002555 AK225680 BC006103	-16254	+	AK091692 AX747131 NM_001130028	-17141	+	L29217 L29220 NM_003992	-23763	+	AK024781 AK225099 TSC_hg19_v1_chr15_-_74988340 AF193058	63857	-	TSC_hg19_v1_chr15_-_74988360 BC011534 BC021271 AK056339 NM_001142443 NM_001142444 NM_025083	63888	-	AK310810 AM233517 AM233518 AM233519 AM233520 AM236046 AM236047 BC023019 AY871801 K03191 AK223108 AK223113 AK313880 NM_000499	93318	-	AK293769|CLK3|1198|CDC-like kinase 3##BC019881|CLK3|1198|CDC-like kinase 3##CR933693|CLK3|1198|CDC-like kinase 3##AK291983|CLK3|1198|CDC-like kinase 3##AK301689|CLK3|1198|CDC-like kinase 3##BC002555|CLK3|1198|CDC-like kinase 3##AK225680|CLK3|1198|CDC-like kinase 3##BC006103|CLK3|1198|CDC-like kinase 3##AK091692|CLK3|1198|CDC-like kinase 3##NM_001130028|CLK3|1198|CDC-like kinase 3##L29217|CLK3|1198|CDC-like kinase 3##L29220|CLK3|1198|CDC-like kinase 3##NM_003992|CLK3|1198|CDC-like kinase 3##AK024781|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK225099|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AF193058|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC011534|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC021271|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK056339|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142443|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142444|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_025083|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK310810|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233517|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233518|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233519|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233520|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236046|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236047|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC023019|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AY871801|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##K03191|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223108|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223113|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK313880|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##NM_000499|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1	0.998886	CTCF.p2:3:0.999
chr19	40671577	40671689	reg1006750.p1	11.946	+	TSC_hg19_v1_chr19_-_40596843 AK091274 AX746890 NM_001010880 AK131328 BC021982 NM_001142577 NM_001142578 NM_001142579	-74821	-	TSC_hg19_v1_chr19_-_40562138 AK127063 NM_001005851	-109507	-	NM_178544 AK122968 AK292528 BC045649	-168648	+	TSC_hg19_v1_chr19_+_40697520 NM_002446 X90846 Z48615	26013	+	TSC_hg19_v1_chr19_-_40724275 AK054935 AK289550 BC029539 NM_152479	52655	-	AK023327 AK301833 NM_024877	60946	-	AK091274|ZNF780A|284323|zinc finger protein 780A##NM_001010880|ZNF780A|284323|zinc finger protein 780A##AK131328|ZNF780A|284323|zinc finger protein 780A##BC021982|ZNF780A|284323|zinc finger protein 780A##NM_001142577|ZNF780A|284323|zinc finger protein 780A##NM_001142578|ZNF780A|284323|zinc finger protein 780A##NM_001142579|ZNF780A|284323|zinc finger protein 780A##AK127063|ZNF780B|163131|zinc finger protein 780B##NM_001005851|ZNF780B|163131|zinc finger protein 780B##NM_178544|ZNF546|339327|zinc finger protein 546##AK122968|ZNF546|339327|zinc finger protein 546##AK292528|ZNF546|339327|zinc finger protein 546##BC045649|ZNF546|339327|zinc finger protein 546##NM_002446|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##X90846|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##Z48615|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##AK054935|TTC9B|148014|tetratricopeptide repeat domain 9B##AK289550|TTC9B|148014|tetratricopeptide repeat domain 9B##BC029539|TTC9B|148014|tetratricopeptide repeat domain 9B##NM_152479|TTC9B|148014|tetratricopeptide repeat domain 9B##AK023327|CNTD2|79935|cyclin N-terminal domain containing 2##AK301833|CNTD2|79935|cyclin N-terminal domain containing 2##NM_024877|CNTD2|79935|cyclin N-terminal domain containing 2	0.775867	CTCF.p2:14:0.776
chr4	25182268	25182388	reg1006855.p1	11.945	+	AK296302 AK095450 TSC_hg19_v1_chr4_+_25162325	-20023	+	AF146396 AJ277541 BC117202 BC126213 TSC_hg19_v1_chr4_-_25162072 AJ238617 EU832146 EU832239 BC023539 BX648976 BC012188 AK292476 NM_016955	-20273	-	AB067503 AF467955 AJ487516 AJ487958 BC101759 BC101761 NM_018176 TSC_hg19_v1_chr4_-_25032569	-149891	-	TSC_hg19_v1_chr4_+_25235654 BC051749 NM_018323 AK128622 AK001967 AY091514 AY065990 AF411320	53390	+	TSC_hg19_v1_chr4_+_25314405 NM_024936 BC157834 BC171821 AK299211 AK309675 AY629351 BC016914 AF161537 CU677765	132119	+	TSC_hg19_v1_chr4_+_25378862 NM_013367 BC059383	196517	+	AK296302|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK095450|LOC285540|285540|uncharacterized LOC285540##AF146396|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ277541|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC117202|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC126213|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ238617|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832146|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832239|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC023539|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BX648976|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC012188|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AK292476|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##NM_016955|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AB067503|LGI2|55203|leucine-rich repeat LGI family, member 2##AF467955|LGI2|55203|leucine-rich repeat LGI family, member 2##AJ487516|LGI2|55203|leucine-rich repeat LGI family, member 2##AJ487958|LGI2|55203|leucine-rich repeat LGI family, member 2##BC101759|LGI2|55203|leucine-rich repeat LGI family, member 2##BC101761|LGI2|55203|leucine-rich repeat LGI family, member 2##NM_018176|LGI2|55203|leucine-rich repeat LGI family, member 2##BC051749|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##NM_018323|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK128622|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK001967|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AY091514|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AY065990|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AF411320|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4##NM_013367|ANAPC4|29945|anaphase promoting complex subunit 4##BC059383|ANAPC4|29945|anaphase promoting complex subunit 4	0.942362	CTCF.p2:6:0.942
chr7	76742198	76742329	reg1008017.p1	11.945	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-485716	-	TSC_hg19_v1_chr7_-_76256148 BC017101	-486060	-	TSC_hg19_v1_chr7_+_76178675 BC078169	-563588	+	BC036053 NM_020879 BX649000 AK292491 HM370402	9683	+	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	86873	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	303455	-	BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC017101|POMZP3|22932|POM121 and ZP3 fusion##BC078169|LOC100133091|100133091|uncharacterized LOC100133091##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)	0.999198	CTCF.p2:1:0.999
chr1	32782200	32782340	reg1009444.p1	11.944	+	TSC_hg19_v1_chr1_+_32757740 BC000301 AK299792 AY627042 AB451297 AB451430 AB463736 CR541717 CU674144 DQ891398 DQ894577	-24530	+	D50405 NM_004964 TSC_hg19_v1_chr1_+_32757707	-24562	+	AK225555 TSC_hg19_v1_chr1_+_32757704 AK296308 AK313061	-24567	+	TSC_hg19_v1_chr1_-_32801835 AB528178 CU688192 AM393505 DQ893237 DQ896567 X70326 AL713653 AY007131 BC007904 BC066915 NM_023009	19461	-	BC035354 NM_052841	45559	+	NM_001167676	45573	-	BC000301|HDAC1|3065|histone deacetylase 1##AK299792|HDAC1|3065|histone deacetylase 1##AY627042|HDAC1|3065|histone deacetylase 1##AB451297|HDAC1|3065|histone deacetylase 1##AB451430|HDAC1|3065|histone deacetylase 1##CR541717|HDAC1|3065|histone deacetylase 1##DQ891398|HDAC1|3065|histone deacetylase 1##DQ894577|HDAC1|3065|histone deacetylase 1##D50405|HDAC1|3065|histone deacetylase 1##NM_004964|HDAC1|3065|histone deacetylase 1##AK225555|HDAC1|3065|histone deacetylase 1##AK296308|HDAC1|3065|histone deacetylase 1##AK313061|HDAC1|3065|histone deacetylase 1##AM393505|MARCKSL1|65108|MARCKS-like 1##DQ893237|MARCKSL1|65108|MARCKS-like 1##DQ896567|MARCKSL1|65108|MARCKS-like 1##X70326|MARCKSL1|65108|MARCKS-like 1##AL713653|MARCKSL1|65108|MARCKS-like 1##AY007131|MARCKSL1|65108|MARCKS-like 1##BC007904|MARCKSL1|65108|MARCKS-like 1##BC066915|MARCKSL1|65108|MARCKS-like 1##NM_023009|MARCKSL1|65108|MARCKS-like 1##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071	0.159818	
chr18	9516547	9516688	reg1008919.p1	11.944	+	TSC_hg19_v1_chr18_+_9475545 NM_006788 BC013126	-41020	+	TSC_hg19_v1_chr18_+_9334831 BC020490 AK315751	-181760	+	TSC_hg19_v1_chr18_+_9334800 AK027629 AK075550 NM_020648 AF196834 AJ297391	-181827	+	TSC_hg19_v1_chr18_-_9614547 AF200478 AK293869 AK292538	97887	-	AK027064 TSC_hg19_v1_chr18_-_9614566 BC060829 AK315106 AF111106 NM_001042388 NM_005134	97960	-	TSC_hg19_v1_chr18_+_9708217 AF234995 NM_006868	191592	+	NM_006788|RALBP1|10928|ralA binding protein 1##BC013126|RALBP1|10928|ralA binding protein 1##BC020490|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK315751|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK027629|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK075550|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##NM_020648|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AF196834|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AJ297391|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AF200478|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK293869|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK292538|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK027064|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##BC060829|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK315106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF111106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_001042388|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_005134|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF234995|RAB31|11031|RAB31, member RAS oncogene family##NM_006868|RAB31|11031|RAB31, member RAS oncogene family	0.74068	CTCF.p2:16:0.741
chr2	173326889	173327017	reg1009048.p1	11.944	+	TSC_hg19_v1_chr2_+_173292395 X53586 BC136455 BC136456 X59512 AB208842	-34474	+	TSC_hg19_v1_chr2_+_173292316 NM_000210 NM_001079818 BC007002	-34633	+	AK311695 AK296496 TSC_hg19_v1_chr2_+_173292147	-34826	+	TSC_hg19_v1_chr2_+_173420776 NM_002610	93828	+	TSC_hg19_v1_chr2_+_173420856 AK312700 AK304388 BC039158	93872	+	AB528474 CU691664 TSC_hg19_v1_chr2_+_173420875 DQ891300 DQ893348 DQ894484 DQ896668 DQ234350	93922	+	X53586|ITGA6|3655|integrin, alpha 6##BC136455|ITGA6|3655|integrin, alpha 6##BC136456|ITGA6|3655|integrin, alpha 6##X59512|ITGA6|3655|integrin, alpha 6##AB208842|ITGA6|3655|integrin, alpha 6##NM_000210|ITGA6|3655|integrin, alpha 6##NM_001079818|ITGA6|3655|integrin, alpha 6##BC007002|ITGA6|3655|integrin, alpha 6##AK311695|ITGA6|3655|integrin, alpha 6##AK296496|ITGA6|3655|integrin, alpha 6##NM_002610|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##AK312700|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##AK304388|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##BC039158|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ891300|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ893348|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ894484|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ896668|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ234350|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	0.723151	CTCF.p2:1:0.723
chrX	77811027	77811152	reg1004884.p1	11.944	+	BC035750 DQ131801 DQ131800 AK023929 DQ131802 NM_006639 AK313643 DQ131799	-228006	-	AB529179 DQ891928 DQ895115 BC071649 TSC_hg19_v1_chrX_-_77395133 AF220509 BC009566 AK312579 BC010350 BC146952 BC146960 NM_015975	-415946	-	AB062432 TSC_hg19_v1_chrX_+_77359778 BC104837 BC113568 BC023234 AY423725 AB385546 CR456716 HQ258236	-451287	+	AK096184 NM_152694	103735	-	NM_005296 AK314134	192119	+	NM_014499 NM_198333 AK313218 AK292138 BC051875	389783	+	BC035750|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131801|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131800|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK023929|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131802|CYSLTR1|10800|cysteinyl leukotriene receptor 1##NM_006639|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK313643|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131799|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ891928|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##DQ895115|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC071649|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AF220509|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC009566|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AK312579|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC010350|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146952|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146960|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##NM_015975|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AB062432|PGK1|5230|phosphoglycerate kinase 1##BC104837|PGK1|5230|phosphoglycerate kinase 1##BC113568|PGK1|5230|phosphoglycerate kinase 1##BC023234|PGK1|5230|phosphoglycerate kinase 1##AY423725|PGK1|5230|phosphoglycerate kinase 1##CR456716|PGK1|5230|phosphoglycerate kinase 1##HQ258236|PGK1|5230|phosphoglycerate kinase 1##AK096184|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_152694|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	0.626869	CTCF.p2:-9:0.627
chr17	73823738	73823847	reg1007711.p1	11.943	+	TSC_hg19_v1_chr17_+_73780952 BC080657 AB384286	-42843	+	TSC_hg19_v1_chr17_+_73780918 AK307289 NM_001080419 BC046175 BC039606 BC064927 AB051540 BC053362 BC033751	-42902	+	BC108701 AF218029 BC001124 BC006497 BC012813 BC017558 TSC_hg19_v1_chr17_-_73775861 BX647280 AK130772 AK304607 AK312762 BX537379 NM_005324	-47951	-	EU831417 EU831510 TSC_hg19_v1_chr17_-_73840455 AK301529 AJ578444	16657	-	TSC_hg19_v1_chr17_-_73840495 AK024474	16719	-	TSC_hg19_v1_chr17_-_73840622 BC067084 NM_199242 AK300316	16992	-	BC080657|UNK|85451|unkempt homolog (Drosophila)##AK307289|UNK|85451|unkempt homolog (Drosophila)##NM_001080419|UNK|85451|unkempt homolog (Drosophila)##BC046175|UNK|85451|unkempt homolog (Drosophila)##BC039606|UNK|85451|unkempt homolog (Drosophila)##BC064927|UNK|85451|unkempt homolog (Drosophila)##AB051540|UNK|85451|unkempt homolog (Drosophila)##BC053362|UNK|85451|unkempt homolog (Drosophila)##BC033751|UNK|85451|unkempt homolog (Drosophila)##BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)##AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)##NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)##EU831417|UNC13D|201294|unc-13 homolog D (C. elegans)##EU831510|UNC13D|201294|unc-13 homolog D (C. elegans)##AK301529|UNC13D|201294|unc-13 homolog D (C. elegans)##AJ578444|UNC13D|201294|unc-13 homolog D (C. elegans)##AK024474|UNC13D|201294|unc-13 homolog D (C. elegans)##BC067084|UNC13D|201294|unc-13 homolog D (C. elegans)##NM_199242|UNC13D|201294|unc-13 homolog D (C. elegans)##AK300316|UNC13D|201294|unc-13 homolog D (C. elegans)	0.144708	
chr19	857130	857210	reg1006564.p2	11.943	+	M34379 NM_001972 X05875 BC074816 BC074817 TSC_hg19_v1_chr19_+_852302	-4873	+	X56606 BC096183 BC096184 BC096185 BC096186 TSC_hg19_v1_chr19_+_840998 NM_002777 AB527757 X55668	-16178	+	TSC_hg19_v1_chr19_+_840963 M75154	-16207	+	TSC_hg19_v1_chr19_+_859663 BC057807 AK300963 NM_001928	2491	+	TSC_hg19_v1_chr19_+_859675 AB590861 AJ313463 DQ884409 M84526 BC051001	2525	+	BC034529 BC040146 TSC_hg19_v1_chr19_+_860648 CR536575	3471	+	M34379|ELANE|1991|elastase, neutrophil expressed##NM_001972|ELANE|1991|elastase, neutrophil expressed##X05875|ELANE|1991|elastase, neutrophil expressed##BC074816|ELANE|1991|elastase, neutrophil expressed##BC074817|ELANE|1991|elastase, neutrophil expressed##X56606|PRTN3|5657|proteinase 3##BC096183|PRTN3|5657|proteinase 3##BC096184|PRTN3|5657|proteinase 3##BC096185|PRTN3|5657|proteinase 3##BC096186|PRTN3|5657|proteinase 3##NM_002777|PRTN3|5657|proteinase 3##X55668|PRTN3|5657|proteinase 3##M75154|PRTN3|5657|proteinase 3##BC057807|CFD|1675|complement factor D (adipsin)##AK300963|CFD|1675|complement factor D (adipsin)##NM_001928|CFD|1675|complement factor D (adipsin)##AJ313463|CFD|1675|complement factor D (adipsin)##DQ884409|CFD|1675|complement factor D (adipsin)##M84526|CFD|1675|complement factor D (adipsin)##BC051001|CFD|1675|complement factor D (adipsin)##BC034529|CFD|1675|complement factor D (adipsin)##BC040146|CFD|1675|complement factor D (adipsin)##CR536575|CFD|1675|complement factor D (adipsin)	0.999777	CTCF.p2:-5:1.000
chr20	52164395	52164557	reg1007344.p2	11.943	+	AK302570 NM_001193421	-362655	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	-574698	+	BX640770 NM_173485	-575531	+	AF041259 NM_006526	35159	-	TSC_hg19_v1_chr20_-_52210810 AK290350	46323	-	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	522586	-	AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK290350|ZNF217|7764|zinc finger protein 217##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1	0.102244	
chr11	61447724	61447834	reg1006135.p2	11.942	+	TSC_hg19_v1_chr11_-_61348549 BC125170 BC125171 NM_001252065 NM_004200	-99252	-	NM_001145077	-171508	+	NM_001170753 NM_145017 TSC_hg19_v1_chr11_+_61248591 AK057333 BC043246 JF442033	-199161	+	TSC_hg19_v1_chr11_+_61447896 BC150176 BC150195 NM_006133 AB014559 BC152453	102	+	TSC_hg19_v1_chr11_+_61520107 AB023171 NM_001127392 AB385408	72328	+	AF086762 NM_013279	75081	+	BC125170|SYT7|9066|synaptotagmin VII##BC125171|SYT7|9066|synaptotagmin VII##NM_001252065|SYT7|9066|synaptotagmin VII##NM_004200|SYT7|9066|synaptotagmin VII##NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B##NM_001170753|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##NM_145017|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##AK057333|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##BC043246|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##JF442033|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##BC150176|DAGLA|747|diacylglycerol lipase, alpha##BC150195|DAGLA|747|diacylglycerol lipase, alpha##NM_006133|DAGLA|747|diacylglycerol lipase, alpha##AB014559|DAGLA|747|diacylglycerol lipase, alpha##BC152453|DAGLA|747|diacylglycerol lipase, alpha##AB023171|C11orf9|745|chromosome 11 open reading frame 9##NM_001127392|C11orf9|745|chromosome 11 open reading frame 9##AF086762|C11orf9|745|chromosome 11 open reading frame 9##NM_013279|C11orf9|745|chromosome 11 open reading frame 9	0.584766	CTCF.p2:-13:0.541
chr14	76373169	76373291	reg1006741.p1	11.942	+	TSC_hg19_v1_chr14_+_76127671 BC136472 BC136473	-245567	+	TSC_hg19_v1_chr14_+_76127610 AK309748 AY237126 BC002766	-245613	+	NM_015072 TSC_hg19_v1_chr14_+_76127588 BC110652	-245661	+	BT007287 AB590825 TSC_hg19_v1_chr14_-_76447259	74017	-	TSC_hg19_v1_chr14_-_76447323 BC018503 EF560714	74100	-	AK313564 TSC_hg19_v1_chr14_-_76447479 X14149 J03241	74241	-	BC136472|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BC136473|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##AK309748|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##AY237126|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##NM_015072|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BC110652|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BT007287|TGFB3|7043|transforming growth factor, beta 3##BC018503|TGFB3|7043|transforming growth factor, beta 3##EF560714|TGFB3|7043|transforming growth factor, beta 3##AK313564|TGFB3|7043|transforming growth factor, beta 3##X14149|TGFB3|7043|transforming growth factor, beta 3##J03241|TGFB3|7043|transforming growth factor, beta 3	0.998655	CTCF.p2:-2:0.999
chr20	32521368	32521507	reg1007001.p2	11.941	+	TSC_hg19_v1_chr20_+_32399155 AB100261 BC033859 AY726594 AY329085	-122217	+	TSC_hg19_v1_chr20_+_32399127 NM_176812	-122351	+	BC132873 BC144188 BC157823 BC146811 BC094738 NM_032819 BC063492 BC040440 AB587355 HQ258664	-201641	+	TSC_hg19_v1_chr20_+_32581531 NM_007367 NM_016732	60042	+	TSC_hg19_v1_chr20_+_32581567 AK226085	60150	+	TSC_hg19_v1_chr20_+_32581716 BC103753 AK299766	60267	+	AB100261|CHMP4B|128866|charged multivesicular body protein 4B##BC033859|CHMP4B|128866|charged multivesicular body protein 4B##AY726594|CHMP4B|128866|charged multivesicular body protein 4B##AY329085|CHMP4B|128866|charged multivesicular body protein 4B##NM_176812|CHMP4B|128866|charged multivesicular body protein 4B##BC132873|ZNF341|84905|zinc finger protein 341##BC144188|ZNF341|84905|zinc finger protein 341##BC157823|ZNF341|84905|zinc finger protein 341##BC146811|ZNF341|84905|zinc finger protein 341##BC094738|ZNF341|84905|zinc finger protein 341##NM_032819|ZNF341|84905|zinc finger protein 341##BC063492|ZNF341|84905|zinc finger protein 341##BC040440|ZNF341|84905|zinc finger protein 341##HQ258664|ZNF341|84905|zinc finger protein 341##NM_007367|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##NM_016732|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK226085|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC103753|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK299766|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))	0.244652	
chr17	41411682	41411812	reg1008897.p1	11.939	+	TSC_hg19_v1_chr17_+_41363905 AK056132 AK290387 AK299974 AK301571 NM_145041	-47868	+	TSC_hg19_v1_chr17_+_41323230 AK299328 AK290005 AK297425 BC012591 X76952 NM_005899 BC009808 AY450308	-88525	+	TSC_hg19_v1_chr17_+_41322538 D30756 NM_031862 AF227189 NM_031858	-89254	+	AL832479 TSC_hg19_v1_chr17_-_41465694 AK123585 AK311685	53943	-	TSC_hg19_v1_chr17_+_41476360 NM_001661 AK314951 BC000043 AB060692 L38490	64620	+	AK294046 TSC_hg19_v1_chr17_+_41561351 BC020697 AK303319 D50487 NM_004941 AK291664	149550	+	AK056132|TMEM106A|113277|transmembrane protein 106A##AK290387|TMEM106A|113277|transmembrane protein 106A##AK299974|TMEM106A|113277|transmembrane protein 106A##AK301571|TMEM106A|113277|transmembrane protein 106A##NM_145041|TMEM106A|113277|transmembrane protein 106A##AK299328|NBR1|4077|neighbor of BRCA1 gene 1##AK290005|NBR1|4077|neighbor of BRCA1 gene 1##AK297425|NBR1|4077|neighbor of BRCA1 gene 1##X76952|NBR1|4077|neighbor of BRCA1 gene 1##NM_005899|NBR1|4077|neighbor of BRCA1 gene 1##BC009808|NBR1|4077|neighbor of BRCA1 gene 1##AY450308|NBR1|4077|neighbor of BRCA1 gene 1##D30756|NBR1|4077|neighbor of BRCA1 gene 1##NM_031862|NBR1|4077|neighbor of BRCA1 gene 1##AF227189|NBR1|4077|neighbor of BRCA1 gene 1##NM_031858|NBR1|4077|neighbor of BRCA1 gene 1##AL832479|LOC100130581|100130581|uncharacterized LOC100130581##AK123585|LOC100130581|100130581|uncharacterized LOC100130581##AK311685|LOC100130581|100130581|uncharacterized LOC100130581##NM_001661|ARL4D|379|ADP-ribosylation factor-like 4D##AK314951|ARL4D|379|ADP-ribosylation factor-like 4D##BC000043|ARL4D|379|ADP-ribosylation factor-like 4D##AB060692|ARL4D|379|ADP-ribosylation factor-like 4D##L38490|ARL4D|379|ADP-ribosylation factor-like 4D##AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	0.694154	CTCF.p2:5:0.694
chr17	42856561	42856690	reg1005258.p1	11.939	+	BC144550 AB462930 AB009675 NM_002390 TSC_hg19_v1_chr17_+_42836567 AK296512	-20006	+	CU677579 AK295296 BC026999 TSC_hg19_v1_chr17_+_42786269	-70388	+	TSC_hg19_v1_chr17_+_42786060 BC033660	-70563	+	NM_005497 TSC_hg19_v1_chr17_-_42907633	51015	-	NM_001080383	51553	-	BC020667 NM_016438	68653	+	BC144550|ADAM11|4185|ADAM metallopeptidase domain 11##AB009675|ADAM11|4185|ADAM metallopeptidase domain 11##NM_002390|ADAM11|4185|ADAM metallopeptidase domain 11##AK296512|ADAM11|4185|ADAM metallopeptidase domain 11##AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##NM_005497|GJC1|10052|gap junction protein, gamma 1, 45kDa##NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa##BC020667|HIGD1B|51751|HIG1 hypoxia inducible domain family, member 1B##NM_016438|HIGD1B|51751|HIG1 hypoxia inducible domain family, member 1B	0.990976	CTCF.p2:0:0.991
chr2	16954482	16954615	reg1004825.p1	11.939	+	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	-107404	-	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-872381	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-872553	+	DQ860102 NM_001099218	745157	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	767339	+	TSC_hg19_v1_chr2_+_17721989 AF039555 U14747 AB001104	767472	+	BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1##AF039555|VSNL1|7447|visinin-like 1##U14747|VSNL1|7447|visinin-like 1##AB001104|VSNL1|7447|visinin-like 1	0.846637	CTCF.p2:-21:0.847
chr15	82658042	82658172	reg1009153.p1	11.938	+	TSC_hg19_v1_chr15_+_82647308 BC066934	-10776	+	NM_001164465	-16402	-	TSC_hg19_v1_chr15_+_82555158 AL833762 NM_001008226 BC144647 AK304339	-102954	+	NM_198181 CR936812	64109	+	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	166786	-	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	286685	+	BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##AL833762|FAM154B|283726|family with sequence similarity 154, member B##NM_001008226|FAM154B|283726|family with sequence similarity 154, member B##AK304339|FAM154B|283726|family with sequence similarity 154, member B##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like	0.999886	CTCF.p2:5:1.000
chr19	16497572	16497709	reg1009460.p1	11.938	+	AF134053 TSC_hg19_v1_chr19_+_16435803	-61871	+	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	-61999	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	-188890	+	BC142662 AB527825 AF110265 BC131590 BC037558 TSC_hg19_v1_chr19_-_16582771 AB015346 NM_021235 BC067114 BC051873 BC142716 AK296473 AK297428 AK024166	85136	-	TSC_hg19_v1_chr19_-_16582810 AK291359	85212	-	CU677059 AB576176 DQ890903 DQ894056 AK058084 BC014595 NM_145046	109330	-	AF134053|KLF2|10365|Kruppel-like factor 2 (lung)##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)##AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC142662|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AF110265|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC131590|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC037558|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB015346|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##NM_021235|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC067114|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC051873|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC142716|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK296473|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK297428|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK024166|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK291359|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB576176|CALR3|125972|calreticulin 3##DQ890903|CALR3|125972|calreticulin 3##DQ894056|CALR3|125972|calreticulin 3##AK058084|CALR3|125972|calreticulin 3##BC014595|CALR3|125972|calreticulin 3##NM_145046|CALR3|125972|calreticulin 3	0.998531	CTCF.p2:2:0.999
chr3	39142731	39142855	reg1006870.p2	11.938	+	TSC_hg19_v1_chr3_+_39093498 AB040882 AK025513 AK297349 AK298810 AK302307 BC026353 NM_020839 BC037168 AB385469 AF468833 AL832926	-49292	+	AF109737 AF150882 NM_014139	-150742	-	AF117907 NM_006514	-307293	-	CU687304 AB527597 TSC_hg19_v1_chr3_-_39149103 BC064624 AK300271 BC103826 BC103827 BC008928	6278	-	TSC_hg19_v1_chr3_-_39149122 BC075854 AK001574 AK057043 AJ409349 NM_031899 AK303847	6333	-	NM_001105513 NM_145755 AJ487015 BC062621 BC129948 AK022483 BC039691 AK302408 AK302465 CU687576	6446	+	AB040882|WDR48|57599|WD repeat domain 48##AK025513|WDR48|57599|WD repeat domain 48##AK297349|WDR48|57599|WD repeat domain 48##AK298810|WDR48|57599|WD repeat domain 48##AK302307|WDR48|57599|WD repeat domain 48##BC026353|WDR48|57599|WD repeat domain 48##NM_020839|WDR48|57599|WD repeat domain 48##BC037168|WDR48|57599|WD repeat domain 48##AF468833|WDR48|57599|WD repeat domain 48##AL832926|WDR48|57599|WD repeat domain 48##AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF117907|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##NM_006514|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##BC064624|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK300271|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103826|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103827|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC008928|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC075854|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK001574|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK057043|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AJ409349|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##NM_031899|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK303847|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##NM_001105513|TTC21A|199223|tetratricopeptide repeat domain 21A##NM_145755|TTC21A|199223|tetratricopeptide repeat domain 21A##AJ487015|TTC21A|199223|tetratricopeptide repeat domain 21A##BC062621|TTC21A|199223|tetratricopeptide repeat domain 21A##BC129948|TTC21A|199223|tetratricopeptide repeat domain 21A##AK022483|TTC21A|199223|tetratricopeptide repeat domain 21A##BC039691|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302408|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302465|TTC21A|199223|tetratricopeptide repeat domain 21A	0.999809	CTCF.p2:-4:1.000
chr11	9528403	9528544	reg1009058.p1	11.937	+	NM_003442 BC020219 AK313330 TSC_hg19_v1_chr11_+_9482560 AK291133 AK297214 BC014458	-45930	+	BC004388 TSC_hg19_v1_chr11_-_9482148 BC036621	-46345	-	AK312885 TSC_hg19_v1_chr11_+_9406199 AF098799 BC114929	-122253	+	TSC_hg19_v1_chr11_+_9595216 NM_003390 U10564 BC070052	66740	+	X62048 TSC_hg19_v1_chr11_+_9595313	66852	+	BC051831 TSC_hg19_v1_chr11_+_9595437	66960	+	NM_003442|ZNF143|7702|zinc finger protein 143##BC020219|ZNF143|7702|zinc finger protein 143##AK313330|ZNF143|7702|zinc finger protein 143##AK291133|ZNF143|7702|zinc finger protein 143##AK297214|ZNF143|7702|zinc finger protein 143##BC014458|ZNF143|7702|zinc finger protein 143##BC004388|LOC644656|644656|uncharacterized LOC644656##BC036621|LOC644656|644656|uncharacterized LOC644656##AK312885|IPO7|10527|importin 7##AF098799|IPO7|10527|importin 7##BC114929|IPO7|10527|importin 7##NM_003390|WEE1|7465|WEE1 homolog (S. pombe)##U10564|WEE1|7465|WEE1 homolog (S. pombe)##BC070052|WEE1|7465|WEE1 homolog (S. pombe)##X62048|WEE1|7465|WEE1 homolog (S. pombe)##BC051831|WEE1|7465|WEE1 homolog (S. pombe)	0.999783	CTCF.p2:9:1.000
chr1	231451687	231451793	reg1007163.p2	11.936	+	TSC_hg19_v1_chr1_+_231376968 AJ002190 AB209882 AF043937 BC000450 AK311386	-74713	+	AK223304 TSC_hg19_v1_chr1_+_231376959 AK309994 AK222773	-74778	+	TSC_hg19_v1_chr1_+_231376955 AK314181 AK297982	-74786	+	CU690194 AB587600 BC035763 TSC_hg19_v1_chr1_-_231473577 NM_175876 AK096460	21814	-	NM_001010984 NM_032018 BC068478 TSC_hg19_v1_chr1_+_231473753	21978	+	TSC_hg19_v1_chr1_+_231473794 BC015740	22047	+	AJ002190|GNPAT|8443|glyceronephosphate O-acyltransferase##AB209882|GNPAT|8443|glyceronephosphate O-acyltransferase##AF043937|GNPAT|8443|glyceronephosphate O-acyltransferase##BC000450|GNPAT|8443|glyceronephosphate O-acyltransferase##AK311386|GNPAT|8443|glyceronephosphate O-acyltransferase##AK223304|GNPAT|8443|glyceronephosphate O-acyltransferase##AK309994|GNPAT|8443|glyceronephosphate O-acyltransferase##AK222773|GNPAT|8443|glyceronephosphate O-acyltransferase##AK314181|GNPAT|8443|glyceronephosphate O-acyltransferase##AK297982|GNPAT|8443|glyceronephosphate O-acyltransferase##BC035763|EXOC8|149371|exocyst complex component 8##NM_175876|EXOC8|149371|exocyst complex component 8##AK096460|EXOC8|149371|exocyst complex component 8##NM_001010984|C1orf124|83932|chromosome 1 open reading frame 124##NM_032018|C1orf124|83932|chromosome 1 open reading frame 124##BC068478|C1orf124|83932|chromosome 1 open reading frame 124##BC015740|C1orf124|83932|chromosome 1 open reading frame 124	0.976983	CTCF.p2:-11:0.977
chr1	27970523	27970641	reg1008417.p1	11.936	+	TSC_hg19_v1_chr1_-_27961656 BC064382 AK130188 NM_005248	-8896	-	M27454 AK301078 BC002836 AK304846 NM_001042729	-17507	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	-17912	-	TSC_hg19_v1_chr1_-_27998690 X02492 BC011601 BC015603	28095	-	TSC_hg19_v1_chr1_-_27998704 AK024814 AK314488	28127	-	TSC_hg19_v1_chr1_-_27998734 NM_002038 NM_022872 NM_022873	28157	-	BC064382|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK130188|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_005248|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##M27454|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK301078|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042729|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##X02492|IFI6|2537|interferon, alpha-inducible protein 6##BC011601|IFI6|2537|interferon, alpha-inducible protein 6##BC015603|IFI6|2537|interferon, alpha-inducible protein 6##AK024814|IFI6|2537|interferon, alpha-inducible protein 6##AK314488|IFI6|2537|interferon, alpha-inducible protein 6##NM_002038|IFI6|2537|interferon, alpha-inducible protein 6##NM_022872|IFI6|2537|interferon, alpha-inducible protein 6##NM_022873|IFI6|2537|interferon, alpha-inducible protein 6	0.0	
chr1	185139683	185139819	reg1004918.p2	11.935	+	TSC_hg19_v1_chr1_+_185126418 AK291443	-13355	+	NM_001105518 AK127980 TSC_hg19_v1_chr1_+_185126298 BC030781 NM_017673 AK315802	-13481	+	AK302166 TSC_hg19_v1_chr1_-_185126203 NM_001202423	-13560	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	146568	-	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	146719	-	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	563825	+	AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##NM_001105518|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK127980|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##BC030781|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##NM_017673|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK315802|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK302166|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##NM_001202423|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1	0.994867	CTCF.p2:-6:0.995
chr15	69770718	69770829	reg1007029.p1	11.935	+	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-25552	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-63411	-	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	-64027	+	BC015421 TSC_hg19_v1_chr15_-_70341948	571136	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	619454	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	619470	-	NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.976513	CTCF.p2:-19:0.977
chr11	81355405	81355540	reg1008868.p1	11.934	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-2203748	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-3069577	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-3069680	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	1089426	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	1256045	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	1257302	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	1.640635	CTCF.p2:-6:0.945	CTCF.p2:73:0.696
chr7	38262200	38262347	reg1008012.p1	11.934	+	TSC_hg19_v1_chr7_+_38217932 AK091579 AX747072 AJ492267 AY358645 BC005959	-44315	+	NM_032016 AK315404 TSC_hg19_v1_chr7_+_38217846	-44445	+	NM_001242948 AK309180	-301346	+	BC062761 BC105589 AF151103 NM_001003799 NM_001003806	50966	-	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	112931	-	Y00482 TSC_hg19_v1_chr7_-_38389512	127203	-	AK091579|STARD3NL|83930|STARD3 N-terminal like##AJ492267|STARD3NL|83930|STARD3 N-terminal like##AY358645|STARD3NL|83930|STARD3 N-terminal like##BC005959|STARD3NL|83930|STARD3 N-terminal like##NM_032016|STARD3NL|83930|STARD3 N-terminal like##AK315404|STARD3NL|83930|STARD3 N-terminal like##NM_001242948|EPDR1|54749|ependymin related protein 1 (zebrafish)##AK309180|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC062761|TRGV9|6983|T cell receptor gamma variable 9##BC105589|TARP|445347|TCR gamma alternate reading frame protein##AF151103|TARP|445347|TCR gamma alternate reading frame protein##NM_001003799|TARP|445347|TCR gamma alternate reading frame protein##NM_001003806|TARP|445347|TCR gamma alternate reading frame protein##BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)	0.980889	CTCF.p2:8:0.981
chr9	102978584	102978728	reg1008197.p1	11.933	+	TSC_hg19_v1_chr9_+_102861574 BC006370 BC111761 BC112351	-117035	+	AF039217 TSC_hg19_v1_chr9_+_102861540 BC063847 AK304851 BC072429 BC110864	-117116	+	TSC_hg19_v1_chr9_+_102861524 BC041665 NM_014425 NM_183245 AK312795	-117175	+	AK302619 NM_001161584	136196	-	BC030652 TSC_hg19_v1_chr9_-_103115211 AK304869 AK000294 AB060968 AK303662 AK298916 NM_017746	136529	-	BC042955 TSC_hg19_v1_chr9_+_103115352 AK056351	136704	+	BC006370|INVS|27130|inversin##BC111761|INVS|27130|inversin##BC112351|INVS|27130|inversin##AF039217|INVS|27130|inversin##BC063847|INVS|27130|inversin##AK304851|INVS|27130|inversin##BC072429|INVS|27130|inversin##BC041665|INVS|27130|inversin##NM_014425|INVS|27130|inversin##NM_183245|INVS|27130|inversin##AK312795|INVS|27130|inversin##AK302619|TEX10|54881|testis expressed 10##NM_001161584|TEX10|54881|testis expressed 10##BC030652|TEX10|54881|testis expressed 10##AK304869|TEX10|54881|testis expressed 10##AK000294|TEX10|54881|testis expressed 10##AB060968|TEX10|54881|testis expressed 10##AK303662|TEX10|54881|testis expressed 10##AK298916|TEX10|54881|testis expressed 10##NM_017746|TEX10|54881|testis expressed 10	0.999719	CTCF.p2:4:1.000
chr9	113400787	113400929	reg1008029.p1	11.933	+	TSC_hg19_v1_chr9_-_113342011 AJ619977 AY243503 AK122605 BC030816 NM_153366	-58794	-	HQ258720 AF305830 BC130549 BC130551 BC144461 BC035743 NM_001003936	-300758	-	TSC_hg19_v1_chr9_-_113018882 NM_001244938 NM_003329	-381959	-	NM_001166280 NM_001166281 NM_005592 AF006464 BC109098 BC109099 EU832778 EU832779 GQ129313	30258	+	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	399554	-	AK298590 TSC_hg19_v1_chr9_-_113801086	400175	-	AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001244938|TXN|7295|thioredoxin##NM_003329|TXN|7295|thioredoxin##NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1##AK298590|LPAR1|1902|lysophosphatidic acid receptor 1	0.994741	CTCF.p2:-27:0.995
chr2	27906501	27906602	reg1006851.p2	11.932	+	TSC_hg19_v1_chr2_+_27886755 AK300958	-19781	+	BC074000 AB018307 NM_014860 AF197954 AK000329 AK304889 BC045638 AF224759 TSC_hg19_v1_chr2_-_27886542	-20059	-	AK001486 NM_018158 BC098302 BC098358 BC099711 BC099739 AY028435	-20202	+	TSC_hg19_v1_chr2_+_27994585 BC090047 NM_004891 NM_145330	88032	+	TSC_hg19_v1_chr2_+_27994614 BC020834 AF047440 BC087846 BC009475 CR456888 CR542117	88111	+	CU675980 AK300989 TSC_hg19_v1_chr2_-_28113253 AJ404857 NM_022128 BX648909 AY643715 BC017425	206699	-	AK300958|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC074000|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AB018307|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##NM_014860|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AF197954|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AK000329|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AK304889|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##BC045638|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AF224759|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AK001486|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##NM_018158|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC098302|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC098358|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC099711|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC099739|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##AY028435|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC090047|MRPL33|9553|mitochondrial ribosomal protein L33##NM_004891|MRPL33|9553|mitochondrial ribosomal protein L33##NM_145330|MRPL33|9553|mitochondrial ribosomal protein L33##BC020834|MRPL33|9553|mitochondrial ribosomal protein L33##AF047440|MRPL33|9553|mitochondrial ribosomal protein L33##BC087846|MRPL33|9553|mitochondrial ribosomal protein L33##BC009475|MRPL33|9553|mitochondrial ribosomal protein L33##CR456888|MRPL33|9553|mitochondrial ribosomal protein L33##CR542117|MRPL33|9553|mitochondrial ribosomal protein L33##AK300989|RBKS|64080|ribokinase##AJ404857|RBKS|64080|ribokinase##NM_022128|RBKS|64080|ribokinase##BX648909|RBKS|64080|ribokinase##AY643715|RBKS|64080|ribokinase##BC017425|RBKS|64080|ribokinase	1.964857	CTCF.p2:19:1.000	CTCF.p2:-28:0.965
chr4	1161043	1161156	reg1006635.p1	11.932	+	BC101258 BC101259 BC101260 BC101261 BC036250 AK310043 BC050356 AK096160 NM_001131034 NM_001193318 NM_194439	-53767	-	AJ277437 NM_021923 AB385230 DQ892417 DQ895631 AK225486	-154834	+	AF312678 AY358303 NM_001004356 AF279689 NM_001004358	-155415	+	TSC_hg19_v1_chr4_-_1166372 AK130164	5270	-	TSC_hg19_v1_chr4_-_1166378 BC002707	5289	-	TSC_hg19_v1_chr4_-_1166480 AK074618	5388	-	BC101258|RNF212|285498|ring finger protein 212##BC101259|RNF212|285498|ring finger protein 212##BC101260|RNF212|285498|ring finger protein 212##BC101261|RNF212|285498|ring finger protein 212##BC036250|RNF212|285498|ring finger protein 212##AK310043|RNF212|285498|ring finger protein 212##BC050356|RNF212|285498|ring finger protein 212##AK096160|RNF212|285498|ring finger protein 212##NM_001131034|RNF212|285498|ring finger protein 212##NM_001193318|RNF212|285498|ring finger protein 212##NM_194439|RNF212|285498|ring finger protein 212##AJ277437|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_021923|FGFRL1|53834|fibroblast growth factor receptor-like 1##DQ892417|FGFRL1|53834|fibroblast growth factor receptor-like 1##DQ895631|FGFRL1|53834|fibroblast growth factor receptor-like 1##AK225486|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF312678|FGFRL1|53834|fibroblast growth factor receptor-like 1##AY358303|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004356|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF279689|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004358|FGFRL1|53834|fibroblast growth factor receptor-like 1##AK130164|SPON2|10417|spondin 2, extracellular matrix protein##BC002707|SPON2|10417|spondin 2, extracellular matrix protein##AK074618|SPON2|10417|spondin 2, extracellular matrix protein	0.800411	CTCF.p2:3:0.782
chrX	114993300	114993454	reg1006452.p1	11.932	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-165509	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-196335	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-197771	+	BC003645 TSC_hg19_v1_chrX_-_115085443	92062	-	AK313927 NM_000686 X87723 U16957	308618	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	574390	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:21:0.429
chr6	43737321	43737454	reg1007331.p1	11.930	+	TSC_hg19_v1_chr6_-_43655539 NM_001193343 NM_018135	-81839	-	TSC_hg19_v1_chr6_-_43655521 CU679679 DQ884400 AK300757 BC010364 AK307183 AB049952	-81868	-	NM_001193341 NM_152732 AK291399 BC029519 AK055407	-124591	+	TSC_hg19_v1_chr6_+_43737947 NM_001025366 NM_001025367 NM_001025368 NM_001025369 NM_001025370 NM_001033756 NM_001171622 NM_001171623 NM_001171624 NM_001171625 NM_001171626 NM_001171627 NM_001171628 NM_001171629 NM_001171630 NM_001204384 NM_001204385 NM_003376 BC058855 BC019867	631	+	TSC_hg19_v1_chr6_+_43738284 AF022375	860	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	1147	+	NM_001193343|MRPS18A|55168|mitochondrial ribosomal protein S18A##NM_018135|MRPS18A|55168|mitochondrial ribosomal protein S18A##DQ884400|MRPS18A|55168|mitochondrial ribosomal protein S18A##AK300757|MRPS18A|55168|mitochondrial ribosomal protein S18A##BC010364|MRPS18A|55168|mitochondrial ribosomal protein S18A##AK307183|MRPS18A|55168|mitochondrial ribosomal protein S18A##AB049952|MRPS18A|55168|mitochondrial ribosomal protein S18A##NM_001193341|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##NM_152732|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##AK291399|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##BC029519|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##AK055407|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##NM_001025366|VEGFA|7422|vascular endothelial growth factor A##NM_001025367|VEGFA|7422|vascular endothelial growth factor A##NM_001025368|VEGFA|7422|vascular endothelial growth factor A##NM_001025369|VEGFA|7422|vascular endothelial growth factor A##NM_001025370|VEGFA|7422|vascular endothelial growth factor A##NM_001033756|VEGFA|7422|vascular endothelial growth factor A##NM_001171622|VEGFA|7422|vascular endothelial growth factor A##NM_001171623|VEGFA|7422|vascular endothelial growth factor A##NM_001171624|VEGFA|7422|vascular endothelial growth factor A##NM_001171625|VEGFA|7422|vascular endothelial growth factor A##NM_001171626|VEGFA|7422|vascular endothelial growth factor A##NM_001171627|VEGFA|7422|vascular endothelial growth factor A##NM_001171628|VEGFA|7422|vascular endothelial growth factor A##NM_001171629|VEGFA|7422|vascular endothelial growth factor A##NM_001171630|VEGFA|7422|vascular endothelial growth factor A##NM_001204384|VEGFA|7422|vascular endothelial growth factor A##NM_001204385|VEGFA|7422|vascular endothelial growth factor A##NM_003376|VEGFA|7422|vascular endothelial growth factor A##BC058855|VEGFA|7422|vascular endothelial growth factor A##BC019867|VEGFA|7422|vascular endothelial growth factor A##AF022375|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A	0.97867	CTCF.p2:-14:0.979
chr1	100925197	100925305	reg1006356.p1	11.929	+	BC071578 TSC_hg19_v1_chr1_+_100818053 AF064103 AK310657 AF000367	-107148	+	TSC_hg19_v1_chr1_+_100818040 AF064102	-107211	+	TSC_hg19_v1_chr1_+_100818021 NM_003672 NM_033312 NM_033313	-107234	+	AB042410 BC036775 NM_022049	78458	+	AK225748 TSC_hg19_v1_chr1_+_101004594	79277	+	NM_001078 NM_001199834 NM_080682 TSC_hg19_v1_chr1_+_101185297 AK223266 AK291732 AK296692 BC068490 M30257 BC017276 BC085003 M60335 AB590609 EU831989 EU832082 X53051 CU686647	260055	+	BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF064102|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AB042410|GPR88|54112|G protein-coupled receptor 88##BC036775|GPR88|54112|G protein-coupled receptor 88##NM_022049|GPR88|54112|G protein-coupled receptor 88##AK225748|GPR88|54112|G protein-coupled receptor 88##NM_001078|VCAM1|7412|vascular cell adhesion molecule 1##NM_001199834|VCAM1|7412|vascular cell adhesion molecule 1##NM_080682|VCAM1|7412|vascular cell adhesion molecule 1##AK223266|VCAM1|7412|vascular cell adhesion molecule 1##AK291732|VCAM1|7412|vascular cell adhesion molecule 1##AK296692|VCAM1|7412|vascular cell adhesion molecule 1##BC068490|VCAM1|7412|vascular cell adhesion molecule 1##M30257|VCAM1|7412|vascular cell adhesion molecule 1##BC017276|VCAM1|7412|vascular cell adhesion molecule 1##BC085003|VCAM1|7412|vascular cell adhesion molecule 1##M60335|VCAM1|7412|vascular cell adhesion molecule 1##EU831989|VCAM1|7412|vascular cell adhesion molecule 1##EU832082|VCAM1|7412|vascular cell adhesion molecule 1##X53051|VCAM1|7412|vascular cell adhesion molecule 1	0.946421	CTCF.p2:16:0.946
chr12	90407308	90407433	reg1008043.p1	11.929	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-303825	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-304683	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-357519	-	BC026075 BC024183 BC027600 BC034491 NM_152638	941581	-	U59111 TSC_hg19_v1_chr12_-_91398750	991377	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	991409	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.094314	
chr12	1059064	1059213	reg1005811.p2	11.928	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-312	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-42056	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	-196382	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	41314	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	644213	-	AY009399 NM_030775	667083	+	AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.999089	CTCF.p2:-1:0.999
chr6	2104652	2104759	reg1005223.p1	11.928	+	TSC_hg19_v1_chr6_+_1611545 BC169307	-493131	+	BC134421 NM_001453	-494025	+	NM_001452 U13220 AB463646	-714580	+	AF040260 NM_001253846	71519	-	CR541929 CR541947 DQ892789 DQ896036 AF042377 TSC_hg19_v1_chr6_-_2245809 AK130651 AK313953 BC000117 NM_001500	141093	-	TSC_hg19_v1_chr6_+_2245995 AK023629	141308	+	BC169307|FOXC1|2296|forkhead box C1##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541929|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541947|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ892789|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ896036|GMDS|2762|GDP-mannose 4,6-dehydratase##AF042377|GMDS|2762|GDP-mannose 4,6-dehydratase##AK130651|GMDS|2762|GDP-mannose 4,6-dehydratase##AK313953|GMDS|2762|GDP-mannose 4,6-dehydratase##BC000117|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001500|GMDS|2762|GDP-mannose 4,6-dehydratase	0.0	
chr6	83777232	83777373	reg1008617.p1	11.928	+	TSC_hg19_v1_chr6_-_83775541 BC101512 BC101538 BC143617 BC036049 AB126062 NM_198920 BC053645 AK298205 BC057845	-1777	-	TSC_hg19_v1_chr6_+_83073996 AK074790 NM_001166392	-703325	+	TSC_hg19_v1_chr6_+_83073565 BC037161 AK074786	-703769	+	TSC_hg19_v1_chr6_+_83777389 BX648667 NM_001199942 NM_015018 AK094766	95	+	AF102265 AB032081 AF180371 TSC_hg19_v1_chr6_-_83902977 AK314512 AK225363 AK001365 AK023432 BC001258 NM_001199918 NM_001199919 NM_015599	125670	-	NM_033411 TSC_hg19_v1_chr6_+_83903075 AK309249 AK295724 AK302978 AK313083	125795	+	BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AK074790|TPBG|7162|trophoblast glycoprotein##NM_001166392|TPBG|7162|trophoblast glycoprotein##BC037161|TPBG|7162|trophoblast glycoprotein##AK074786|TPBG|7162|trophoblast glycoprotein##BX648667|DOPEY1|23033|dopey family member 1##NM_001199942|DOPEY1|23033|dopey family member 1##NM_015018|DOPEY1|23033|dopey family member 1##AK094766|DOPEY1|23033|dopey family member 1##AF102265|PGM3|5238|phosphoglucomutase 3##AB032081|PGM3|5238|phosphoglucomutase 3##AF180371|PGM3|5238|phosphoglucomutase 3##AK314512|PGM3|5238|phosphoglucomutase 3##AK225363|PGM3|5238|phosphoglucomutase 3##AK001365|PGM3|5238|phosphoglucomutase 3##AK023432|PGM3|5238|phosphoglucomutase 3##BC001258|PGM3|5238|phosphoglucomutase 3##NM_001199918|PGM3|5238|phosphoglucomutase 3##NM_001199919|PGM3|5238|phosphoglucomutase 3##NM_015599|PGM3|5238|phosphoglucomutase 3##NM_033411|RWDD2A|112611|RWD domain containing 2A##AK309249|RWDD2A|112611|RWD domain containing 2A##AK295724|RWDD2A|112611|RWD domain containing 2A##AK302978|RWDD2A|112611|RWD domain containing 2A##AK313083|RWDD2A|112611|RWD domain containing 2A	0.834897	CTCF.p2:-8:0.835
chr1	151974321	151974439	reg1007486.p1	11.927	+	NM_002966	-7667	-	BC015973 AK291073 TSC_hg19_v1_chr1_-_151966307 D28387	-8062	-	M81457 TSC_hg19_v1_chr1_-_151966289 BC105786 M38591	-8093	-	D50374 TSC_hg19_v1_chr1_-_152009438	35042	-	TSC_hg19_v1_chr1_-_152009451 AK312184 BC014354	35070	-	X80201 TSC_hg19_v1_chr1_-_152009481 BC001410 D49355	35094	-	NM_002966|S100A10|6281|S100 calcium binding protein A10##BC015973|S100A10|6281|S100 calcium binding protein A10##AK291073|S100A10|6281|S100 calcium binding protein A10##D28387|S100A10|6281|S100 calcium binding protein A10##M81457|S100A10|6281|S100 calcium binding protein A10##BC105786|S100A10|6281|S100 calcium binding protein A10##M38591|S100A10|6281|S100 calcium binding protein A10##D50374|S100A11|6282|S100 calcium binding protein A11##AK312184|S100A11|6282|S100 calcium binding protein A11##BC014354|S100A11|6282|S100 calcium binding protein A11##X80201|S100A11|6282|S100 calcium binding protein A11##BC001410|S100A11|6282|S100 calcium binding protein A11##D49355|S100A11|6282|S100 calcium binding protein A11	0.927633	CTCF.p2:3:0.928
chr15	51169217	51169363	reg1007762.p1	11.926	+	TSC_hg19_v1_chr15_-_51057895 AK075454 AY169314 NM_032802	-111387	-	TSC_hg19_v1_chr15_-_51057864 BC025740 AK315651 AJ345028	-111431	-	TSC_hg19_v1_chr15_-_50978995 AY032950 NM_017672	-190293	-	TSC_hg19_v1_chr15_-_51200797 AK091906	31471	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	31637	+	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	217560	-	AK075454|SPPL2A|84888|signal peptide peptidase-like 2A##AY169314|SPPL2A|84888|signal peptide peptidase-like 2A##NM_032802|SPPL2A|84888|signal peptide peptidase-like 2A##BC025740|SPPL2A|84888|signal peptide peptidase-like 2A##AK315651|SPPL2A|84888|signal peptide peptidase-like 2A##AJ345028|SPPL2A|84888|signal peptide peptidase-like 2A##AY032950|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7##NM_017672|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3	0.101575	
chr6	35114306	35114427	reg1007515.p1	11.926	+	AK057234 AK316403 AF536532 BC040003 BC033729 BC090050 AK301778 AK302022 TSC_hg19_v1_chr6_-_35109091 AK098590 AK301975 AK302456 AK302375 AK315078 BC048418 AF536533 NM_001093728 NM_018679	-5272	-	TSC_hg19_v1_chr6_+_34857037 BC022396 NM_015245 D86982 BC031934 BC086310 AK298987 BC132832 BC144341 AB385297	-257266	+	AF118094 AB464280 BT019404 BT019405 CR542068 DQ893239 DQ896569 TSC_hg19_v1_chr6_-_34855820 AK313475 BC021972 D63705 AK302226 NM_005643 X83928	-258661	-	TSC_hg19_v1_chr6_+_35181732 BC052263 AK291218	67502	+	TSC_hg19_v1_chr6_+_35182182 AF452494 NM_152753 EU832354 EU832439 AY639608	67822	+	CR936607 TSC_hg19_v1_chr6_+_35200693	86294	+	AK057234|TCP11|6954|t-complex 11 homolog (mouse)##AK316403|TCP11|6954|t-complex 11 homolog (mouse)##AF536532|TCP11|6954|t-complex 11 homolog (mouse)##BC040003|TCP11|6954|t-complex 11 homolog (mouse)##BC033729|TCP11|6954|t-complex 11 homolog (mouse)##BC090050|TCP11|6954|t-complex 11 homolog (mouse)##AK301778|TCP11|6954|t-complex 11 homolog (mouse)##AK302022|TCP11|6954|t-complex 11 homolog (mouse)##AK098590|TCP11|6954|t-complex 11 homolog (mouse)##AK301975|TCP11|6954|t-complex 11 homolog (mouse)##AK302456|TCP11|6954|t-complex 11 homolog (mouse)##AK302375|TCP11|6954|t-complex 11 homolog (mouse)##AK315078|TCP11|6954|t-complex 11 homolog (mouse)##BC048418|TCP11|6954|t-complex 11 homolog (mouse)##AF536533|TCP11|6954|t-complex 11 homolog (mouse)##NM_001093728|TCP11|6954|t-complex 11 homolog (mouse)##NM_018679|TCP11|6954|t-complex 11 homolog (mouse)##BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##AF118094|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BT019404|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BT019405|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##CR542068|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##DQ893239|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##DQ896569|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##AK313475|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BC021972|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##D63705|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##AK302226|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##NM_005643|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##X83928|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BC052263|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AK291218|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AF452494|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##NM_152753|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##EU832354|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##EU832439|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AY639608|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##CR936607|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3	0.944174	CTCF.p2:-9:0.329	CTCF.p2:-19:0.615
chr19	45907519	45907636	reg1008298.p1	11.925	+	TSC_hg19_v1_chr19_-_45873851 NM_000400 NM_001130867	-33732	-	BC008346 TSC_hg19_v1_chr19_-_45873816 BC108255 AK303358 BC110522 BC110523	-33839	-	BC025318 NM_177417 BC062998 BC073841	-63570	+	BC032298 AY869712 BC014499 BC020259 NM_006663 TSC_hg19_v1_chr19_-_45908318	736	-	NM_012099 U86751 BC054044 BC046141 BC108889	2006	+	AK130326 BC064913 TSC_hg19_v1_chr19_-_45909620 NM_001142502	2018	-	NM_000400|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##NM_001130867|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC008346|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC108255|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##AK303358|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC110522|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC110523|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC025318|KLC3|147700|kinesin light chain 3##NM_177417|KLC3|147700|kinesin light chain 3##BC062998|KLC3|147700|kinesin light chain 3##BC073841|KLC3|147700|kinesin light chain 3##BC032298|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##AY869712|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##BC014499|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##BC020259|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##NM_006663|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##NM_012099|CD3EAP|10849|CD3e molecule, epsilon associated protein##U86751|CD3EAP|10849|CD3e molecule, epsilon associated protein##BC054044|CD3EAP|10849|CD3e molecule, epsilon associated protein##BC046141|CD3EAP|10849|CD3e molecule, epsilon associated protein##BC108889|CD3EAP|10849|CD3e molecule, epsilon associated protein##AK130326|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##BC064913|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##NM_001142502|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like	0.835847	CTCF.p2:0:0.836
chr2	34795697	34795806	reg1007232.p2	11.925	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-971406	-	AB020653 NM_015376	-1056810	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-1094055	+	TSC_hg19_v1_chr2_+_36582920 AY358371	1787211	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	1787651	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	2029531	-	BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	1.112844	CTCF.p2:12:0.978
chr17	74456743	74456875	reg1007883.p1	11.924	+	BC092430 NM_001166579	-7377	+	TSC_hg19_v1_chr17_-_74449273 AB051521 NM_022066	-7521	-	BC007822 TSC_hg19_v1_chr17_-_74449235	-7566	-	NM_001088 U40347 AB593119 BC069434	6848	+	AK303434 AY500247 AK292166 NM_001005498	27089	-	TSC_hg19_v1_chr17_-_74497506 BC016034 AK292135 NM_024599	40650	-	BC092430|AANAT|15|aralkylamine N-acetyltransferase##NM_001166579|AANAT|15|aralkylamine N-acetyltransferase##AB051521|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_022066|UBE2O|63893|ubiquitin-conjugating enzyme E2O##BC007822|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_001088|AANAT|15|aralkylamine N-acetyltransferase##U40347|AANAT|15|aralkylamine N-acetyltransferase##AB593119|AANAT|15|aralkylamine N-acetyltransferase##BC069434|AANAT|15|aralkylamine N-acetyltransferase##AK303434|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AY500247|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292166|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001005498|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##BC016034|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292135|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_024599|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)	0.944537	CTCF.p2:-1:0.945
chr1	27004032	27004185	reg1005274.p1	11.923	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	-131750	+	TSC_hg19_v1_chr1_+_26872335 AK092955	-131785	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-147773	+	NM_006015 NM_139135 AF231056	18414	+	AB210022 AF219114 AB051293 AF265208 TSC_hg19_v1_chr1_+_27024003	19861	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	97180	+	AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.168007	
chr13	76123482	76123601	reg1006818.p1	11.923	+	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	-11563	-	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	-67203	-	CR749622 TSC_hg19_v1_chr13_-_75901948	-221619	-	TSC_hg19_v1_chr13_+_76123890 AK313665 BC018125 NM_006002 M30496 CU676190 BT019359 CR456855	383	+	AF330045 NM_005358	71028	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	86929	+	AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6##AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##CR749622|TBC1D4|9882|TBC1 domain family, member 4##AK313665|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BC018125|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_006002|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##M30496|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BT019359|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##CR456855|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##AK092052|LMO7|4008|LIM domain 7	0.020852	
chr2	202101228	202101360	reg1006351.p1	11.923	+	NM_001080124 NM_001228 NM_033355 NM_033358 AF422927 AF422928 BC010390 AK310630 BC017031 U60520 X98176	-3069	+	TSC_hg19_v1_chr2_+_202047863 AK310746 U86214 AK304859 AK225475 AY690601 BC042844 U60519 AJ487678 AJ487679	-53434	+	NM_001206524 NM_001206542 NM_001230 NM_032974 NM_032976 NM_032977	-53674	+	NM_001080125 AF422926 BC068050 AF422925 AF422929 X98172 AY429525	21503	+	NM_033356 X98173	23962	+	AK124115 BC031603 NM_001127391 NM_139163 AK292283	120799	-	NM_001080124|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001228|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033355|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033358|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422927|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422928|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC010390|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310630|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC017031|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##U60520|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98176|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001080125|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422926|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC068050|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422929|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98172|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033356|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98173|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK124115|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##BC031603|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_001127391|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_139163|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##AK292283|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12	0.998999	CTCF.p2:-15:0.999
chr5	133437771	133437930	reg1006737.p2	11.923	+	AK095989 NM_003374	-97027	-	TSC_hg19_v1_chr5_-_133340431 L06132	-97420	-	TSC_hg19_v1_chr5_-_133340397 BC071168 AK293639	-97449	-	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	12669	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	13511	+	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	74773	-	AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##L06132|VDAC1|7416|voltage-dependent anion channel 1##BC071168|VDAC1|7416|voltage-dependent anion channel 1##AK293639|VDAC1|7416|voltage-dependent anion channel 1##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1	0.060333	
chr11	86650285	86650388	reg1004978.p1	11.921	+	NM_007173 TSC_hg19_v1_chr11_+_86511583 AK316508 AK075362 AK315562 AK304301 AK304054 BC063022 AL136914 BC001278 AF015287 AF193611 AY359033	-138784	+	TSC_hg19_v1_chr11_-_86383659 AK300974 NM_001161586	-266671	-	X79440 TSC_hg19_v1_chr11_-_86383470 NM_006680 AK313695	-266894	-	TSC_hg19_v1_chr11_-_86666094 AY462097	15771	-	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	16052	-	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	98642	+	NM_007173|PRSS23|11098|protease, serine, 23##AK075362|PRSS23|11098|protease, serine, 23##AK315562|PRSS23|11098|protease, serine, 23##AK304301|PRSS23|11098|protease, serine, 23##AK304054|PRSS23|11098|protease, serine, 23##AL136914|PRSS23|11098|protease, serine, 23##BC001278|PRSS23|11098|protease, serine, 23##AF015287|PRSS23|11098|protease, serine, 23##AF193611|PRSS23|11098|protease, serine, 23##AY359033|PRSS23|11098|protease, serine, 23##AK300974|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001161586|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##X79440|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_006680|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK313695|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AY462097|FZD4|8322|frizzled family receptor 4##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135	0.78282	CTCF.p2:7:0.783
chr20	39619290	39619417	reg1007655.p1	11.921	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-301476	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-2028364	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-2064285	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	38141	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	38311	+	TSC_hg19_v1_chr20_+_39765861 AB210028	146509	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.02576	
chr2	208905621	208905734	reg1006924.p1	11.921	+	TSC_hg19_v1_chr2_-_208890252 BX648983 NM_001080475	-15413	-	U43318 AB043702 NM_003468	-271581	-	TSC_hg19_v1_chr2_+_208576466 BC067253	-329177	+	HQ258094 U66583 BC117338 BC117340 NM_006891	83519	-	AB590655 U66582 BC074954 BC074955 NM_020989	88803	-	BC074944 BC074945 BC117384 BC117388 NM_005210	105199	-	BX648983|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##NM_001080475|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##U43318|FZD5|7855|frizzled family receptor 5##AB043702|FZD5|7855|frizzled family receptor 5##NM_003468|FZD5|7855|frizzled family receptor 5##BC067253|CCNYL1|151195|cyclin Y-like 1##HQ258094|CRYGD|1421|crystallin, gamma D##U66583|CRYGD|1421|crystallin, gamma D##BC117338|CRYGD|1421|crystallin, gamma D##BC117340|CRYGD|1421|crystallin, gamma D##NM_006891|CRYGD|1421|crystallin, gamma D##U66582|CRYGC|1420|crystallin, gamma C##BC074954|CRYGC|1420|crystallin, gamma C##BC074955|CRYGC|1420|crystallin, gamma C##NM_020989|CRYGC|1420|crystallin, gamma C##BC074944|CRYGB|1419|crystallin, gamma B##BC074945|CRYGB|1419|crystallin, gamma B##BC117384|CRYGB|1419|crystallin, gamma B##BC117388|CRYGB|1419|crystallin, gamma B##NM_005210|CRYGB|1419|crystallin, gamma B	0.0	
chr3	195380647	195380744	reg1006249.p2	11.921	+	TSC_hg19_v1_chr3_-_195310989 NM_001647	-69665	-	J02611 BC007402 TSC_hg19_v1_chr3_-_195310812 AK312090 AK294523	-69865	-	TSC_hg19_v1_chr3_-_195306274 BT019860 BT019861 CR456838 CR541773 CU675645 DQ892668 DQ896124	-74393	-	BC053551 TSC_hg19_v1_chr3_+_195384934 BC062438 AK299148 AK057553 AK316025	4234	+	TSC_hg19_v1_chr3_+_195384941 BC073879 AK300421 BC064564 AK074764	4259	+	TSC_hg19_v1_chr3_+_195447752 NM_152673 AK311504	67060	+	NM_001647|APOD|347|apolipoprotein D##J02611|APOD|347|apolipoprotein D##BC007402|APOD|347|apolipoprotein D##AK312090|APOD|347|apolipoprotein D##AK294523|APOD|347|apolipoprotein D##BT019860|APOD|347|apolipoprotein D##BT019861|APOD|347|apolipoprotein D##CR456838|APOD|347|apolipoprotein D##CR541773|APOD|347|apolipoprotein D##DQ892668|APOD|347|apolipoprotein D##DQ896124|APOD|347|apolipoprotein D##BC053551|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##BC062438|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK299148|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AK057553|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK316025|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##BC073879|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##BC064564|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK074764|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##NM_152673|MUC20|200958|mucin 20, cell surface associated##AK311504|MUC20|200958|mucin 20, cell surface associated	0.788607	CTCF.p2:-18:0.789
chr17	74543548	74543661	reg1007676.p1	11.920	+	DQ390338 NM_001077620 BC146898 BC146904	-7458	+	AJ315162 AK098057 BC029798 AB057769 BC018822 NM_134268	-9902	-	TSC_hg19_v1_chr17_-_74497506 BC016034 AK292135 NM_024599	-46145	-	TSC_hg19_v1_chr17_+_74553850 AK123993 AK129904 AB073602 BC042949 AK055935 BX647993 BC100293	10275	+	TSC_hg19_v1_chr17_-_74581928 BT019972 BC040455 AJ251053 U14550	38301	-	TSC_hg19_v1_chr17_-_74581934 AK225943	38337	-	DQ390338|PRCD|768206|progressive rod-cone degeneration##NM_001077620|PRCD|768206|progressive rod-cone degeneration##BC146898|PRCD|768206|progressive rod-cone degeneration##BC146904|PRCD|768206|progressive rod-cone degeneration##AJ315162|CYGB|114757|cytoglobin##AK098057|CYGB|114757|cytoglobin##BC029798|CYGB|114757|cytoglobin##AB057769|CYGB|114757|cytoglobin##NM_134268|CYGB|114757|cytoglobin##BC016034|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292135|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_024599|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##BC042949|LOC100507246|100507246|uncharacterized LOC100507246##BX647993|LOC100507246|100507246|uncharacterized LOC100507246##BC100293|LOC100507246|100507246|uncharacterized LOC100507246##BT019972|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##BC040455|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##AJ251053|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##U14550|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##AK225943|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2	0.927868	CTCF.p2:1:0.928
chr1	184044698	184044824	reg1008703.p1	11.919	+	TSC_hg19_v1_chr1_+_184020866 AF288394 NM_001127394 NM_052965 BC022030 AK098196 CU692464 AK296655 AK307241	-23901	+	AB011156 AF288389 NM_015101 BC035672 AK095192 TSC_hg19_v1_chr1_-_184006893	-37897	-	AB385353 CU690156 AK293973 TSC_hg19_v1_chr1_-_184006634	-38196	-	TSC_hg19_v1_chr1_+_184356162 NM_030806	311392	+	TSC_hg19_v1_chr1_+_184356194 BC028567	311436	+	AF312864 TSC_hg19_v1_chr1_+_184356245 AY258286	311505	+	AF288394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##NM_001127394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##NM_052965|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##BC022030|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AK098196|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AK296655|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AK307241|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AB011156|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AF288389|GLT25D2|23127|glycosyltransferase 25 domain containing 2##NM_015101|GLT25D2|23127|glycosyltransferase 25 domain containing 2##BC035672|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AK095192|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AK293973|GLT25D2|23127|glycosyltransferase 25 domain containing 2##NM_030806|C1orf21|81563|chromosome 1 open reading frame 21##BC028567|C1orf21|81563|chromosome 1 open reading frame 21##AF312864|C1orf21|81563|chromosome 1 open reading frame 21##AY258286|C1orf21|81563|chromosome 1 open reading frame 21	0.999124	CTCF.p2:-10:0.999
chr9	101994127	101994270	reg1008928.p1	11.918	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-9611	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-9955	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-9981	-	TSC_hg19_v1_chr9_-_102582187 AK057451	587967	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	589959	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	674729	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.437324	CTCF.p2:-12:0.437
chr3	110033511	110033627	reg1006377.p1	11.917	+	AK058092 NM_001145553	-904733	+	TSC_hg19_v1_chr3_-_109056388 BC032846 AK290992 NM_018189	-977166	-	DQ891225 DQ894410 AK001575 AK299290 AB528636 AK298623 TSC_hg19_v1_chr3_-_109056370 AK022698	-977216	-	TSC_hg19_v1_chr3_+_110790623 NM_001243286 NM_015480	756978	+	TSC_hg19_v1_chr3_+_110790671 BC067808	757132	+	TSC_hg19_v1_chr3_+_110790825 AF282874 AK075105 NM_001243288	757325	+	AK058092|FLJ25363|401082|uncharacterized LOC401082##NM_001145553|FLJ25363|401082|uncharacterized LOC401082##BC032846|DPPA4|55211|developmental pluripotency associated 4##AK290992|DPPA4|55211|developmental pluripotency associated 4##NM_018189|DPPA4|55211|developmental pluripotency associated 4##DQ891225|DPPA4|55211|developmental pluripotency associated 4##DQ894410|DPPA4|55211|developmental pluripotency associated 4##AK001575|DPPA4|55211|developmental pluripotency associated 4##AK299290|DPPA4|55211|developmental pluripotency associated 4##AK298623|DPPA4|55211|developmental pluripotency associated 4##AK022698|DPPA4|55211|developmental pluripotency associated 4##NM_001243286|PVRL3|25945|poliovirus receptor-related 3##NM_015480|PVRL3|25945|poliovirus receptor-related 3##BC067808|PVRL3|25945|poliovirus receptor-related 3##AF282874|PVRL3|25945|poliovirus receptor-related 3##AK075105|PVRL3|25945|poliovirus receptor-related 3##NM_001243288|PVRL3|25945|poliovirus receptor-related 3	0.662681	CTCF.p2:-4:0.663
chr2	7184531	7184655	reg1008514.p1	11.916	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-127006	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-166730	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-177890	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1637610	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1793126	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1959228	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.937461	CTCF.p2:5:0.937
chr4	84561168	84561290	reg1007511.p1	11.916	+	TSC_hg19_v1_chr4_+_84457420 DQ345298 BC090956 AY358100 NM_032717 DQ324782	-103648	+	TSC_hg19_v1_chr4_+_84457260 AK055749 AK223543	-103957	+	BC016905 TSC_hg19_v1_chr4_-_84406254 EF531340 BC039573 AY358576 AK022704 AK023676 NM_139076	-154955	-	NM_006168	858157	-	NM_001263 U65887	942864	+	NM_014991	1326314	-	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK055749|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK223543|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC016905|FAM175A|84142|family with sequence similarity 175, member A##EF531340|FAM175A|84142|family with sequence similarity 175, member A##BC039573|FAM175A|84142|family with sequence similarity 175, member A##AY358576|FAM175A|84142|family with sequence similarity 175, member A##AK022704|FAM175A|84142|family with sequence similarity 175, member A##AK023676|FAM175A|84142|family with sequence similarity 175, member A##NM_139076|FAM175A|84142|family with sequence similarity 175, member A##NM_006168|NKX6-1|4825|NK6 homeobox 1##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3	0.98742	CTCF.p2:11:0.987
chr6	56224169	56224302	reg1008729.p1	11.916	+	TSC_hg19_v1_chr6_-_56112350 BC045597 AF414088 AL136624 AK313398 NM_030820	-111874	-	TSC_hg19_v1_chr6_-_56112233 BC126108 BC143862 BC143863 BC143864 BC143865 AK126586	-111999	-	AK291559 TSC_hg19_v1_chr6_-_55740389	-483846	-	AF330693 TSC_hg19_v1_chr6_-_56258945	34689	-	BC038763 TSC_hg19_v1_chr6_-_56407722	183473	-	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	283404	-	BC045597|COL21A1|81578|collagen, type XXI, alpha 1##AF414088|COL21A1|81578|collagen, type XXI, alpha 1##AL136624|COL21A1|81578|collagen, type XXI, alpha 1##AK313398|COL21A1|81578|collagen, type XXI, alpha 1##NM_030820|COL21A1|81578|collagen, type XXI, alpha 1##BC126108|COL21A1|81578|collagen, type XXI, alpha 1##BC143862|COL21A1|81578|collagen, type XXI, alpha 1##BC143863|COL21A1|81578|collagen, type XXI, alpha 1##BC143864|COL21A1|81578|collagen, type XXI, alpha 1##BC143865|COL21A1|81578|collagen, type XXI, alpha 1##AK126586|COL21A1|81578|collagen, type XXI, alpha 1##AK291559|BMP5|653|bone morphogenetic protein 5##AF330693|COL21A1|81578|collagen, type XXI, alpha 1##AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin	0.999522	CTCF.p2:-20:1.000
chr22	25758254	25758387	reg1006544.p1	11.915	+	NM_000496	-142709	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	-162476	+	TSC_hg19_v1_chr22_+_25591072 AK025418	-167191	+	AL137651 NM_182492	203	-	BC139736 NM_001135772	19223	-	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	85756	+	NM_000496|CRYBB2|1415|crystallin, beta B2##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##AK025418|KIAA1671|85379|KIAA1671##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1	0.997375	CTCF.p2:-25:0.997
chr6	141884051	141884188	reg1007787.p1	11.915	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-2188335	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-2188358	-	NM_001168389 NM_001168388	-2188696	-	BC095542 GU727635 M73482 NM_002511	525745	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	584271	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	584287	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.997844	CTCF.p2:31:0.998
chr10	116231261	116231382	reg1006608.p2	11.914	+	BC024314 NM_001001936 NM_032550	-66807	-	AK123108 BC033212 AK027470 TSC_hg19_v1_chr10_-_116164254 AK294969 AK291712 AF474151	-67079	-	TSC_hg19_v1_chr10_+_115999012 AK122716 NM_198496 AJ536328 AJ616914 BC128588 AY572972 BC143380	-232162	+	CU677968 TSC_hg19_v1_chr10_-_116251632	20286	-	TSC_hg19_v1_chr10_-_116286631 AK298709 BC002448	55281	-	TSC_hg19_v1_chr10_-_116286673 CR749819 NM_006720 AK098277	55358	-	BC024314|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_001001936|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_032550|AFAP1L2|84632|actin filament associated protein 1-like 2##AK123108|AFAP1L2|84632|actin filament associated protein 1-like 2##BC033212|AFAP1L2|84632|actin filament associated protein 1-like 2##AK294969|AFAP1L2|84632|actin filament associated protein 1-like 2##AK291712|AFAP1L2|84632|actin filament associated protein 1-like 2##AF474151|AFAP1L2|84632|actin filament associated protein 1-like 2##AK122716|VWA2|340706|von Willebrand factor A domain containing 2##NM_198496|VWA2|340706|von Willebrand factor A domain containing 2##AJ536328|VWA2|340706|von Willebrand factor A domain containing 2##AJ616914|VWA2|340706|von Willebrand factor A domain containing 2##BC128588|VWA2|340706|von Willebrand factor A domain containing 2##AY572972|VWA2|340706|von Willebrand factor A domain containing 2##BC143380|VWA2|340706|von Willebrand factor A domain containing 2##AK298709|ABLIM1|3983|actin binding LIM protein 1##BC002448|ABLIM1|3983|actin binding LIM protein 1##CR749819|ABLIM1|3983|actin binding LIM protein 1##NM_006720|ABLIM1|3983|actin binding LIM protein 1##AK098277|ABLIM1|3983|actin binding LIM protein 1	0.999881	CTCF.p2:-9:1.000
chr10	6151024	6151174	reg1008801.p1	11.914	+	TSC_hg19_v1_chr10_+_6131035 BC007871 BC039322 NM_001145547	-19928	+	TSC_hg19_v1_chr10_+_6131024 AF542550 AK314952	-20100	+	TSC_hg19_v1_chr10_+_6130954 NM_032905	-20150	+	AK302518 TSC_hg19_v1_chr10_+_6186860 NM_001145443	35717	+	TSC_hg19_v1_chr10_+_6186890 AK131307	35785	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	35813	+	BC007871|RBM17|84991|RNA binding motif protein 17##BC039322|RBM17|84991|RNA binding motif protein 17##NM_001145547|RBM17|84991|RNA binding motif protein 17##AF542550|RBM17|84991|RNA binding motif protein 17##AK314952|RBM17|84991|RNA binding motif protein 17##NM_032905|RBM17|84991|RNA binding motif protein 17##NM_001145443|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	0.975699	CTCF.p2:-25:0.976
chr7	7004806	7004937	reg1007582.p1	11.914	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-138973	-	AK296026 CU679629 AK000993 TSC_hg19_v1_chr7_-_6865849	-139033	-	AK314983 BC034495 NM_001099697 NM_173565	-211132	+	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	217376	+	BC136892 BC144431 AJ890451 NM_001037763	570583	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	601717	+	BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK296026|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK000993|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)	0.991264	CTCF.p2:0:0.991
chr10	89620024	89620152	reg1007066.p1	11.913	+	TSC_hg19_v1_chr10_-_89577921 AK075223 NM_032810	-42186	-	TSC_hg19_v1_chr10_+_89419623 NM_001015880 NM_004670 BC009894 AK312556 AF091242 AF150754 AF074331 AF173365 DQ893625 DQ895430 AF313907	-200543	+	AK309176 NM_001178118	-352499	+	EU552092 NM_001126049	3105	-	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	3138	+	TSC_hg19_v1_chr10_+_89623380 BC005821	3301	+	AK075223|ATAD1|84896|ATPase family, AAA domain containing 1##NM_032810|ATAD1|84896|ATPase family, AAA domain containing 1##NM_001015880|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##NM_004670|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##BC009894|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK312556|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF091242|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF150754|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF074331|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF173365|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ893625|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ895430|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF313907|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK309176|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178118|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##EU552092|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_001126049|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog	0.308731	CTCF.p2:21:0.252
chr1	75237746	75237867	reg1008265.p1	11.913	+	NM_001130042 NM_001130043 NM_001134759 NM_001889	-38715	-	NM_001162916 AK098237 BC071765 NM_138467 AK294264 AK299849 BC009514 AK311272 AB590606	-38926	+	TSC_hg19_v1_chr1_-_75198733 AK128794 BX647883 BC039578 AK223150 AK223201 AB209714 AK314813 BC070058	-39094	-	NM_001001933 BC040321	356313	+	AK128063 BC028743 BC034580 BC051740 NM_001130058 NM_152697 AK093170 AX747970	838975	-	AK299573 TSC_hg19_v1_chr1_-_76081791	843940	-	NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001162916|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK098237|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC071765|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##NM_138467|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK294264|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK299849|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC009514|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK311272|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK128794|CRYZ|1429|crystallin, zeta (quinone reductase)##BX647883|CRYZ|1429|crystallin, zeta (quinone reductase)##BC039578|CRYZ|1429|crystallin, zeta (quinone reductase)##AK223150|CRYZ|1429|crystallin, zeta (quinone reductase)##AK223201|CRYZ|1429|crystallin, zeta (quinone reductase)##AB209714|CRYZ|1429|crystallin, zeta (quinone reductase)##AK314813|CRYZ|1429|crystallin, zeta (quinone reductase)##BC070058|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001001933|LHX8|431707|LIM homeobox 8##BC040321|LHX8|431707|LIM homeobox 8##AK128063|SLC44A5|204962|solute carrier family 44, member 5##BC028743|SLC44A5|204962|solute carrier family 44, member 5##BC034580|SLC44A5|204962|solute carrier family 44, member 5##BC051740|SLC44A5|204962|solute carrier family 44, member 5##NM_001130058|SLC44A5|204962|solute carrier family 44, member 5##NM_152697|SLC44A5|204962|solute carrier family 44, member 5##AK093170|SLC44A5|204962|solute carrier family 44, member 5##AK299573|SLC44A5|204962|solute carrier family 44, member 5	0.99792	CTCF.p2:-3:0.998
chr6	125632349	125632489	reg1008985.p1	11.913	+	TSC_hg19_v1_chr6_-_125623231 BC001671 NM_016063	-9172	-	TSC_hg19_v1_chr6_-_125623123 AF529363 BC066332 BC061520 BC003357 AF151888	-9314	-	AK124817 NM_001003395	-157043	+	TSC_hg19_v1_chr6_+_126070724 NM_012259	438308	+	TSC_hg19_v1_chr6_+_126070775 AF173901	438347	+	AK289943 AF232238 AB044755 BC007707 TSC_hg19_v1_chr6_+_126070853 AF237949 AJ249545	438423	+	BC001671|HDDC2|51020|HD domain containing 2##NM_016063|HDDC2|51020|HD domain containing 2##AF529363|HDDC2|51020|HD domain containing 2##BC066332|HDDC2|51020|HD domain containing 2##BC061520|HDDC2|51020|HD domain containing 2##BC003357|HDDC2|51020|HD domain containing 2##AF151888|HDDC2|51020|HD domain containing 2##AK124817|TPD52L1|7164|tumor protein D52-like 1##NM_001003395|TPD52L1|7164|tumor protein D52-like 1##NM_012259|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF173901|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AK289943|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF232238|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AB044755|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##BC007707|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF237949|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AJ249545|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	0.752612	CTCF.p2:-14:0.753
chr1	151707619	151707749	reg1004985.p1	11.912	+	NM_001144956	-13672	+	BC004145 TSC_hg19_v1_chr1_-_151689279 BC052491 AK299681 AY165003 NM_007185	-18415	-	AB209264 NM_001172648 NM_001172649	-18848	-	BC073949 NM_001134939	27760	+	TSC_hg19_v1_chr1_-_151735962 BC004517 AK300668	28241	-	TSC_hg19_v1_chr1_-_151735968 AK293401	28282	-	NM_001144956|RIIAD1|284485|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1##BC004145|CELF3|11189|CUGBP, Elav-like family member 3##BC052491|CELF3|11189|CUGBP, Elav-like family member 3##AY165003|CELF3|11189|CUGBP, Elav-like family member 3##NM_007185|CELF3|11189|CUGBP, Elav-like family member 3##AB209264|CELF3|11189|CUGBP, Elav-like family member 3##NM_001172648|CELF3|11189|CUGBP, Elav-like family member 3##NM_001172649|CELF3|11189|CUGBP, Elav-like family member 3##BC073949|OAZ3|51686|ornithine decarboxylase antizyme 3##NM_001134939|OAZ3|51686|ornithine decarboxylase antizyme 3##BC004517|MRPL9|65005|mitochondrial ribosomal protein L9##AK300668|MRPL9|65005|mitochondrial ribosomal protein L9##AK293401|MRPL9|65005|mitochondrial ribosomal protein L9	0.991352	CTCF.p2:29:0.991
chr14	101112195	101112305	reg1008115.p1	11.912	+	BC002607 NM_020836	-76120	-	AB527893 CU678064 EU832622 EU832695 NM_001159531	-77917	-	TSC_hg19_v1_chr14_+_100842812 NM_001161476 BX248767 AK291960 NM_024515 BC067872 AY295082	-269412	+	TSC_hg19_v1_chr14_+_101193228 NM_003836 AK289384 AK297918 AK313258 BC007741 BC014015	80973	+	TSC_hg19_v1_chr14_+_101193275 BC013197	81030	+	TSC_hg19_v1_chr14_+_101193330 CU675787 DQ017081 DQ126100 DQ138965 Z12172	81109	+	BC002607|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_020836|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832622|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832695|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001159531|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001161476|WDR25|79446|WD repeat domain 25##BX248767|WDR25|79446|WD repeat domain 25##AK291960|WDR25|79446|WD repeat domain 25##NM_024515|WDR25|79446|WD repeat domain 25##BC067872|WDR25|79446|WD repeat domain 25##AY295082|WDR25|79446|WD repeat domain 25##NM_003836|DLK1|8788|delta-like 1 homolog (Drosophila)##AK289384|DLK1|8788|delta-like 1 homolog (Drosophila)##AK297918|DLK1|8788|delta-like 1 homolog (Drosophila)##AK313258|DLK1|8788|delta-like 1 homolog (Drosophila)##BC007741|DLK1|8788|delta-like 1 homolog (Drosophila)##BC014015|DLK1|8788|delta-like 1 homolog (Drosophila)##BC013197|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ017081|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ126100|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ138965|DLK1|8788|delta-like 1 homolog (Drosophila)##Z12172|DLK1|8788|delta-like 1 homolog (Drosophila)	0.995362	CTCF.p2:2:0.995
chr1	220906524	220906655	reg1008046.p1	11.911	+	NM_024709 TSC_hg19_v1_chr1_+_220863727 BC036067 AK091937 AK056749 AK056749 AK024208	-42887	+	AK098103 AK314614 AF154845 BC113869 BC114478 TSC_hg19_v1_chr1_+_220702027 AK295506 AB385474	-204607	+	TSC_hg19_v1_chr1_+_220701565 AB040910 NM_018650	-205032	+	TSC_hg19_v1_chr1_+_220921664 AL136931 BC011973 NM_017898 BC016859	15055	+	NM_022746 TSC_hg19_v1_chr1_+_220960254 AK026043 AK225416 AK094105 AK290812 BC010619	53574	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	146172	+	NM_024709|C1orf115|79762|chromosome 1 open reading frame 115##BC036067|C1orf115|79762|chromosome 1 open reading frame 115##AK091937|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK024208|C1orf115|79762|chromosome 1 open reading frame 115##AK098103|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK314614|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AF154845|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC113869|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC114478|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK295506|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AB040910|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##NM_018650|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AL136931|MARC2|54996|mitochondrial amidoxime reducing component 2##BC011973|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_017898|MARC2|54996|mitochondrial amidoxime reducing component 2##BC016859|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_022746|MARC1|64757|mitochondrial amidoxime reducing component 1##AK026043|MARC1|64757|mitochondrial amidoxime reducing component 1##AK225416|MARC1|64757|mitochondrial amidoxime reducing component 1##AK094105|MARC1|64757|mitochondrial amidoxime reducing component 1##AK290812|MARC1|64757|mitochondrial amidoxime reducing component 1##BC010619|MARC1|64757|mitochondrial amidoxime reducing component 1##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox	0.85538	CTCF.p2:11:0.855
chr2	201346265	201346368	reg1006503.p2	11.911	+	TSC_hg19_v1_chr2_+_201171424 AF193059 BC065817	-174867	+	AL110124 AY450394 AK090867 TSC_hg19_v1_chr2_+_201171276 NM_001100422 NM_001100424 AK002064 AK090703 AK314561 BC010848 BC018736 NM_001100423	-175217	+	NM_015535 AK290496	-175707	+	TSC_hg19_v1_chr2_-_201374792 BC059366 BC045189 AK290867 BC067755 AK055884 NM_152387	28516	-	TSC_hg19_v1_chr2_+_201390929 NM_001160033 NM_001160046 NM_152524 AK095291 BC048349 BC110583 BX647433 AK302457 BC092412 AY094614	44586	+	TSC_hg19_v1_chr2_+_201450590 AK301052	104271	+	AF193059|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC065817|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC059366|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC045189|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK290867|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC067755|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK055884|KCTD18|130535|potassium channel tetramerisation domain containing 18##NM_152387|KCTD18|130535|potassium channel tetramerisation domain containing 18##NM_001160033|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_001160046|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_152524|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK095291|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC048349|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC110583|SGOL2|151246|shugoshin-like 2 (S. pombe)##BX647433|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK302457|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC092412|SGOL2|151246|shugoshin-like 2 (S. pombe)##AY094614|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK301052|AOX1|316|aldehyde oxidase 1	0.079686	
chr3	55780945	55781086	reg1009209.p1	11.911	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-259397	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-259683	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-265607	-	BC111550 BC112391 AB002376 NM_015576	721362	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	810187	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	810231	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.998345	CTCF.p2:14:0.998
chr17	7340373	7340529	reg1007819.p1	11.909	+	BC046189 NM_178518	-1690	+	BC031286 BC048010 NM_175734 BC044816	-11505	+	AK097400 BC033882 NM_199339 CU689788	-16779	+	BC032502 NM_004112 AB209390 AB590462 AY049782 U66199	2362	+	TSC_hg19_v1_chr17_+_7348379 BC023553 NM_000747 AK308106 BC011371 X14830 DQ894641	7953	+	AK298938 TSC_hg19_v1_chr17_+_7348840 AK294880	8399	+	BC046189|TMEM102|284114|transmembrane protein 102##NM_178518|TMEM102|284114|transmembrane protein 102##BC031286|C17orf74|201243|chromosome 17 open reading frame 74##BC048010|C17orf74|201243|chromosome 17 open reading frame 74##NM_175734|C17orf74|201243|chromosome 17 open reading frame 74##BC044816|C17orf74|201243|chromosome 17 open reading frame 74##AK097400|SPEM1|374768|spermatid maturation 1##BC033882|SPEM1|374768|spermatid maturation 1##NM_199339|SPEM1|374768|spermatid maturation 1##BC032502|FGF11|2256|fibroblast growth factor 11##NM_004112|FGF11|2256|fibroblast growth factor 11##AB209390|FGF11|2256|fibroblast growth factor 11##AY049782|FGF11|2256|fibroblast growth factor 11##U66199|FGF11|2256|fibroblast growth factor 11##BC023553|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##NM_000747|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##AK308106|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##BC011371|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##X14830|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##DQ894641|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##AK298938|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##AK294880|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)	0.862528	CTCF.p2:34:0.780
chr20	53263492	53263628	reg1005752.p2	11.909	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-171346	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	-438923	+	TSC_hg19_v1_chr20_+_52824396 NM_002623	-439113	+	NM_080617	1316451	-	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	1560227	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	1670464	+	BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##NM_002623|PFDN4|5203|prefoldin subunit 4##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B	0.956667	CTCF.p2:0:0.957
chr2	201348498	201348640	reg1009063.p1	11.909	+	TSC_hg19_v1_chr2_+_201171424 AF193059 BC065817	-177120	+	AL110124 AY450394 AK090867 TSC_hg19_v1_chr2_+_201171276 NM_001100422 NM_001100424 AK002064 AK090703 AK314561 BC010848 BC018736 NM_001100423	-177470	+	NM_015535 AK290496	-177960	+	TSC_hg19_v1_chr2_-_201374792 BC059366 BC045189 AK290867 BC067755 AK055884 NM_152387	26263	-	TSC_hg19_v1_chr2_+_201390929 NM_001160033 NM_001160046 NM_152524 AK095291 BC048349 BC110583 BX647433 AK302457 BC092412 AY094614	42333	+	TSC_hg19_v1_chr2_+_201450590 AK301052	102018	+	AF193059|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC065817|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC059366|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC045189|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK290867|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC067755|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK055884|KCTD18|130535|potassium channel tetramerisation domain containing 18##NM_152387|KCTD18|130535|potassium channel tetramerisation domain containing 18##NM_001160033|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_001160046|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_152524|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK095291|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC048349|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC110583|SGOL2|151246|shugoshin-like 2 (S. pombe)##BX647433|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK302457|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC092412|SGOL2|151246|shugoshin-like 2 (S. pombe)##AY094614|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK301052|AOX1|316|aldehyde oxidase 1	0.968521	CTCF.p2:7:0.969
chr1	246660747	246660876	reg1008630.p1	11.908	+	AK024733 NM_022743	-80100	-	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-1342503	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-1527128	+	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	9743	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	9797	-	TSC_hg19_v1_chr1_-_246670632 NM_001167740	9826	-	AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3##NM_001167740|SMYD3|64754|SET and MYND domain containing 3	0.866046	CTCF.p2:-10:0.866
chr17	26080304	26080428	reg1007670.p1	11.908	+	TSC_hg19_v1_chr17_+_25958264 AB003517 AB008492	-122094	+	TSC_hg19_v1_chr17_+_25958246 BC105942 BC105944	-122118	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	-122138	+	U31511 TSC_hg19_v1_chr17_-_26127402	47032	-	BC130283 BC144126 U05810 L09210 X73029 AF068236 AK304252 NM_000625 TSC_hg19_v1_chr17_-_26127556	47149	-	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	140025	-	AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC105942|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC105944|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9##U31511|NOS2|4843|nitric oxide synthase 2, inducible##BC130283|NOS2|4843|nitric oxide synthase 2, inducible##BC144126|NOS2|4843|nitric oxide synthase 2, inducible##U05810|NOS2|4843|nitric oxide synthase 2, inducible##L09210|NOS2|4843|nitric oxide synthase 2, inducible##X73029|NOS2|4843|nitric oxide synthase 2, inducible##AF068236|NOS2|4843|nitric oxide synthase 2, inducible##AK304252|NOS2|4843|nitric oxide synthase 2, inducible##NM_000625|NOS2|4843|nitric oxide synthase 2, inducible##AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108	1.525165	CTCF.p2:0:0.999	CTCF.p2:-28:0.526
chr2	144017081	144017211	reg1006699.p2	11.908	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	-130155	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	-130216	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-381906	+	NM_024659	977759	-	AY281366 NM_001006636	1034913	-	BC017741 AK291357 TSC_hg19_v1_chr2_-_145090037 BC061699	1072886	-	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1##AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1##BC017741|GTDC1|79712|glycosyltransferase-like domain containing 1##AK291357|GTDC1|79712|glycosyltransferase-like domain containing 1##BC061699|GTDC1|79712|glycosyltransferase-like domain containing 1	0.999888	CTCF.p2:-9:1.000
chr2	80726363	80726480	reg1006296.p2	11.908	+	TSC_hg19_v1_chr2_-_80531838 AK225779	-194578	-	TSC_hg19_v1_chr2_-_80531719 AK290512	-194696	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	-194896	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	3959949	-	AK296741 TSC_hg19_v1_chr2_-_84686396	3959974	-	NM_003849	3960164	-	AK225779|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit	0.97591	CTCF.p2:-3:0.976
chr3	148177854	148178009	reg1009474.p1	11.908	+	BC104848 BC104850 TSC_hg19_v1_chr3_+_147127864 AB464362	-1050069	+	TSC_hg19_v1_chr3_+_147127156 NM_003412	-1050760	+	NM_001243256 NM_032153	-1053336	-	NM_000685 NM_004835 NM_009585 NM_031850 TSC_hg19_v1_chr3_+_148415688 AK291541 BC068494 BC022447 M87290 S77410 X65699	237756	+	NM_032049	270035	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	367667	+	BC104848|ZIC1|7545|Zic family member 1##BC104850|ZIC1|7545|Zic family member 1##NM_003412|ZIC1|7545|Zic family member 1##NM_001243256|ZIC4|84107|Zic family member 4##NM_032153|ZIC4|84107|Zic family member 4##NM_000685|AGTR1|185|angiotensin II receptor, type 1##NM_004835|AGTR1|185|angiotensin II receptor, type 1##NM_009585|AGTR1|185|angiotensin II receptor, type 1##NM_031850|AGTR1|185|angiotensin II receptor, type 1##AK291541|AGTR1|185|angiotensin II receptor, type 1##BC068494|AGTR1|185|angiotensin II receptor, type 1##BC022447|AGTR1|185|angiotensin II receptor, type 1##M87290|AGTR1|185|angiotensin II receptor, type 1##S77410|AGTR1|185|angiotensin II receptor, type 1##X65699|AGTR1|185|angiotensin II receptor, type 1##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)	0.954262	CTCF.p2:-6:0.954
chr9	77617168	77617324	reg1008636.p1	11.908	+	BC039588 TSC_hg19_v1_chr9_-_77567803 AK225349 AK000972 NM_017998	-49473	-	AF350881 AK057748 NM_017662	-114237	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	-114512	-	TSC_hg19_v1_chr9_-_77643032 BX647386	25824	-	CU689816 EU832520 EU832602 TSC_hg19_v1_chr9_-_77643174	25919	-	TSC_hg19_v1_chr9_-_77643210 AK299691	25964	-	BC039588|C9orf40|55071|chromosome 9 open reading frame 40##AK225349|C9orf40|55071|chromosome 9 open reading frame 40##AK000972|C9orf40|55071|chromosome 9 open reading frame 40##NM_017998|C9orf40|55071|chromosome 9 open reading frame 40##AF350881|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AK057748|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_017662|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##BX647386|C9orf41|138199|chromosome 9 open reading frame 41##EU832520|C9orf41|138199|chromosome 9 open reading frame 41##EU832602|C9orf41|138199|chromosome 9 open reading frame 41##AK299691|C9orf41|138199|chromosome 9 open reading frame 41	0.966068	CTCF.p2:18:0.966
chr19	4911902	4912044	reg1008874.p1	11.907	+	TSC_hg19_v1_chr19_+_4910386 AB177624 EF560733 NM_013282	-1521	+	TSC_hg19_v1_chr19_+_4910185 AK289389	-1795	+	TSC_hg19_v1_chr19_+_4909512 AK307239 AK303361 NM_001048201 AK074377 AK314579	-2474	+	TSC_hg19_v1_chr19_-_4916833 AK097879	4855	-	NM_015015 TSC_hg19_v1_chr19_+_4969124	57151	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	57200	+	AB177624|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##EF560733|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##NM_013282|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##AK289389|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##AK307239|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##AK303361|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##NM_001048201|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##AK074377|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##AK314579|UHRF1|29128|ubiquitin-like with PHD and ring finger domains 1##NM_015015|KDM4B|23030|lysine (K)-specific demethylase 4B##AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B	0.997108	CTCF.p2:5:0.997
chr3	151157511	151157659	reg1007310.p2	11.907	+	AK292096 AK303714 AK316575 TSC_hg19_v1_chr3_-_151102542 BC017898 NM_022788	-55041	-	AF313449 AF321815 NM_176876	-99074	-	BC041116 JF810883 BC029363 AK313208 NM_176894	-110263	-	AK093069 AX747900 BC031063 BC045734 NM_001178145 NM_001178146	982	-	AY273815 NM_178822	18911	-	BX647585 NM_207365 BC065724	294123	+	AK292096|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AK303714|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AK316575|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##BC017898|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##NM_022788|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AF313449|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AF321815|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##NM_176876|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##BC041116|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##BC029363|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##AK313208|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##NM_176894|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##AK093069|IGSF10|285313|immunoglobulin superfamily, member 10##BC031063|IGSF10|285313|immunoglobulin superfamily, member 10##BC045734|IGSF10|285313|immunoglobulin superfamily, member 10##NM_001178145|IGSF10|285313|immunoglobulin superfamily, member 10##NM_001178146|IGSF10|285313|immunoglobulin superfamily, member 10##AY273815|IGSF10|285313|immunoglobulin superfamily, member 10##NM_178822|IGSF10|285313|immunoglobulin superfamily, member 10##BX647585|AADACL2|344752|arylacetamide deacetylase-like 2##NM_207365|AADACL2|344752|arylacetamide deacetylase-like 2##BC065724|AADACL2|344752|arylacetamide deacetylase-like 2	0.98465	CTCF.p2:3:0.985
chr6	42499905	42500059	reg1008672.p1	11.907	+	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	-80159	-	TSC_hg19_v1_chr6_-_42185603 NM_018141	-314365	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-314382	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	31768	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	31795	+	TSC_hg19_v1_chr6_+_42531956 AY061884 CU687884	32022	+	AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.024653	
chr11	61715236	61715357	reg1006575.p2	11.906	+	TSC_hg19_v1_chr11_-_61684983 BC022239 NM_013401	-30308	-	AB529172 DQ892880 DQ896129 CU678796 TSC_hg19_v1_chr11_-_61659018 AF134404 AK295473 AK310523 AF084560 BC004901 NM_021727	-56342	-	AK074939 BC009011 TSC_hg19_v1_chr11_+_61595772 AF126799 AB529115	-119480	+	BC015220 NM_001139443 NM_004183	2059	+	CU677245 AK293701 TSC_hg19_v1_chr11_+_61722706 AK301392	7366	+	CU688148 DQ891113 DQ894293 AB463634 AF088851 M12937 BC015156 M11146 X00318 M97164 TSC_hg19_v1_chr11_-_61735040 BC016857 BC001399	19681	-	BC022239|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##NM_013401|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##DQ892880|FADS3|3995|fatty acid desaturase 3##DQ896129|FADS3|3995|fatty acid desaturase 3##AF134404|FADS3|3995|fatty acid desaturase 3##AK295473|FADS3|3995|fatty acid desaturase 3##AK310523|FADS3|3995|fatty acid desaturase 3##AF084560|FADS3|3995|fatty acid desaturase 3##BC004901|FADS3|3995|fatty acid desaturase 3##NM_021727|FADS3|3995|fatty acid desaturase 3##AK074939|FADS2|9415|fatty acid desaturase 2##BC009011|FADS2|9415|fatty acid desaturase 2##AF126799|FADS2|9415|fatty acid desaturase 2##BC015220|BEST1|7439|bestrophin 1##NM_001139443|BEST1|7439|bestrophin 1##NM_004183|BEST1|7439|bestrophin 1##AK293701|BEST1|7439|bestrophin 1##AK301392|BEST1|7439|bestrophin 1##DQ891113|FTH1|2495|ferritin, heavy polypeptide 1##DQ894293|FTH1|2495|ferritin, heavy polypeptide 1##AF088851|FTH1|2495|ferritin, heavy polypeptide 1##M12937|FTH1|2495|ferritin, heavy polypeptide 1##BC015156|FTH1|2495|ferritin, heavy polypeptide 1##M11146|FTH1|2495|ferritin, heavy polypeptide 1##X00318|FTH1|2495|ferritin, heavy polypeptide 1##M97164|FTH1|2495|ferritin, heavy polypeptide 1##BC016857|FTH1|2495|ferritin, heavy polypeptide 1##BC001399|FTH1|2495|ferritin, heavy polypeptide 1	0.174035	
chr2	127825734	127825864	reg1008467.p1	11.906	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-412007	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-412092	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-3042935	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	38942	-	BC039307 NM_001001665	137543	-	AK131190 TSC_hg19_v1_chr2_-_127977781	151918	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.331388	CTCF.p2:2:0.331
chr7	150683249	150683369	reg1006634.p1	11.906	+	TSC_hg19_v1_chr7_-_150675385 DQ525913 NM_000238 NM_172056	-7940	-	TSC_hg19_v1_chr7_-_150652893 BC127672 BC127673 BC080563 NM_001204798 NM_172057 DQ120125	-30382	-	TSC_hg19_v1_chr7_+_150549604 U11863 AK092514 AK296638 AK307278 AK314806 BC014093 M55602	-133697	+	NM_000603 BC063294 AK300390	4858	+	AK292928 AK302686 M93718 AK315213 TSC_hg19_v1_chr7_+_150690869 AK223636 AK225827 M95296 BC069465 HQ257992 AF400594 DQ256129 DQ256130 DQ256131 NM_001160109 NM_001160110 NM_001160111	7555	+	BC128587 AK096734 AY515311 NM_173681	38259	-	DQ525913|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_000238|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172056|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##BC127673|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_001204798|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172057|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##DQ120125|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##U11863|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK092514|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK296638|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK314806|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##BC014093|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##M55602|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##HQ257992|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	0.722806	CTCF.p2:16:0.723
chrX	119347674	119347810	reg1009106.p1	11.906	+	AL590526 NM_001099685 NM_032498 AF317219 AL590524 AK058125 BC021719 AB464156 DQ890992 DQ894169	-55181	+	AB464155 EU446851 BC103857 BC103858 BC069324 BC069529 AY099086 NM_139282	-97932	-	AB464156 DQ890992 DQ894169 BC021719 AK058125 AL590524 AF317219 AL590526 NM_001099685 NM_032498	-136131	-	BC113730 BC113732 TSC_hg19_v1_chrX_-_119379092 BC022359 AK093895 AX748357	31336	-	TSC_hg19_v1_chrX_+_119384666 BC042753 NM_006777 NM_001184742 BX538016 AL833604 AK312321 BX538101	36844	+	TSC_hg19_v1_chrX_+_119384690 AX721150	36948	+	AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##EU446851|RHOXF1|158800|Rhox homeobox family, member 1##BC103857|RHOXF1|158800|Rhox homeobox family, member 1##BC103858|RHOXF1|158800|Rhox homeobox family, member 1##BC069324|RHOXF1|158800|Rhox homeobox family, member 1##BC069529|RHOXF1|158800|Rhox homeobox family, member 1##AY099086|RHOXF1|158800|Rhox homeobox family, member 1##NM_139282|RHOXF1|158800|Rhox homeobox family, member 1##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##BC113730|NKAPP1|158801|NFKB activating protein pseudogene 1##BC113732|NKAPP1|158801|NFKB activating protein pseudogene 1##BC022359|NKAPP1|158801|NFKB activating protein pseudogene 1##AK093895|NKAPP1|158801|NFKB activating protein pseudogene 1##BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33##NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33##NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33##BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33##AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33##AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33##BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33	0.903782	CTCF.p2:-13:0.904
chr14	81453901	81454012	reg1007747.p1	11.905	+	AK303378 BC024205 NM_000369 NM_001018036 NM_001142626 M31774 BC108653 BC009237 M73747 M32215 BC063613 AB209207 BC120972 BC120973 BC127628 BC127629 BC141970 S49816 AB384880 AY429111 CU687778 S45272	-32090	+	BC045834 AK309833 TSC_hg19_v1_chr14_-_81408073	-45898	-	NM_152446	-48073	-	D14887 TSC_hg19_v1_chr14_-_81687285 NM_015859 BC050703	233324	-	D14886 NM_201595	233618	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	410870	-	BC024205|TSHR|7253|thyroid stimulating hormone receptor##NM_000369|TSHR|7253|thyroid stimulating hormone receptor##NM_001018036|TSHR|7253|thyroid stimulating hormone receptor##NM_001142626|TSHR|7253|thyroid stimulating hormone receptor##M31774|TSHR|7253|thyroid stimulating hormone receptor##BC108653|TSHR|7253|thyroid stimulating hormone receptor##BC009237|TSHR|7253|thyroid stimulating hormone receptor##M73747|TSHR|7253|thyroid stimulating hormone receptor##M32215|TSHR|7253|thyroid stimulating hormone receptor##BC063613|TSHR|7253|thyroid stimulating hormone receptor##AB209207|TSHR|7253|thyroid stimulating hormone receptor##BC120972|TSHR|7253|thyroid stimulating hormone receptor##BC120973|TSHR|7253|thyroid stimulating hormone receptor##BC127628|TSHR|7253|thyroid stimulating hormone receptor##BC127629|TSHR|7253|thyroid stimulating hormone receptor##BC141970|TSHR|7253|thyroid stimulating hormone receptor##S49816|TSHR|7253|thyroid stimulating hormone receptor##AY429111|TSHR|7253|thyroid stimulating hormone receptor##S45272|TSHR|7253|thyroid stimulating hormone receptor##BC045834|CEP128|145508|centrosomal protein 128kDa##AK309833|CEP128|145508|centrosomal protein 128kDa##NM_152446|CEP128|145508|centrosomal protein 128kDa##D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##D14886|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_201595|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2	0.993083	CTCF.p2:6:0.993
chr3	170767758	170767897	reg1007816.p1	11.905	+	NM_000340	-23060	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-23294	-	AB528020 J03810 TSC_hg19_v1_chr3_-_170744510 AK313622 BC060041 AK290846 AK292741	-23337	-	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	410244	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	760428	-	NM_001164436 AK026825	793321	+	NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##J03810|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK313622|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##BC060041|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK290846|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK292741|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212	0.880153	CTCF.p2:-24:0.880
chr12	4386188	4386322	reg1006317.p1	11.904	+	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	-3211	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-403755	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-523873	-	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	44136	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	102545	-	BC121097 BC121098 NM_020996 X63454	168524	-	NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23##BC121097|FGF6|2251|fibroblast growth factor 6##BC121098|FGF6|2251|fibroblast growth factor 6##NM_020996|FGF6|2251|fibroblast growth factor 6##X63454|FGF6|2251|fibroblast growth factor 6	0.999222	CTCF.p2:31:0.999
chr3	99218171	99218314	reg1009079.p1	11.904	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-597750	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-766655	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-766997	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	139208	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	318503	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	376749	-	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like	0.964598	CTCF.p2:-8:0.965
chr5	148337272	148337407	reg1007053.p1	11.903	+	NM_000024 TSC_hg19_v1_chr5_+_148206185 AK313151 BC012481 AK223025 BC073856 BC063486 X04827	-131153	+	AK308471 TSC_hg19_v1_chr5_-_148034091	-303249	-	AJ131724 TSC_hg19_v1_chr5_-_148033739 NM_000870	-303612	-	AB075865 AL832651 AK300420 TSC_hg19_v1_chr5_-_148442626 BC113879 BC114486 AY341075 AB070620 NM_024577	105332	-	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	183851	+	TSC_hg19_v1_chr5_+_148651421 NM_001146337 NM_152406 BC040723	314075	+	NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface##X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131724|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000870|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3##NM_001146337|AFAP1L1|134265|actin filament associated protein 1-like 1##NM_152406|AFAP1L1|134265|actin filament associated protein 1-like 1##BC040723|AFAP1L1|134265|actin filament associated protein 1-like 1	0.996937	CTCF.p2:24:0.997
chr17	76861957	76862078	reg1007245.p1	11.902	+	TSC_hg19_v1_chr17_-_76836895 AB040886 BC027992 AK022913 AK225155 BC016487 BC038983 NM_025090 AK001671	-25097	-	TSC_hg19_v1_chr17_-_76836843 AK225426	-25234	-	BC071582 TSC_hg19_v1_chr17_-_76836610	-25367	-	AK057217 NM_001243540 NM_001243541	37273	-	X54533 TSC_hg19_v1_chr17_-_76921138	59098	-	TSC_hg19_v1_chr17_-_76921336 M32304 J05593 S48568 BC052605	59311	-	AB040886|USP36|57602|ubiquitin specific peptidase 36##BC027992|USP36|57602|ubiquitin specific peptidase 36##AK022913|USP36|57602|ubiquitin specific peptidase 36##AK225155|USP36|57602|ubiquitin specific peptidase 36##BC016487|USP36|57602|ubiquitin specific peptidase 36##BC038983|USP36|57602|ubiquitin specific peptidase 36##NM_025090|USP36|57602|ubiquitin specific peptidase 36##AK001671|USP36|57602|ubiquitin specific peptidase 36##AK225426|USP36|57602|ubiquitin specific peptidase 36##BC071582|USP36|57602|ubiquitin specific peptidase 36##AK057217|LOC100653515|100653515|differential display clone 8##NM_001243540|LOC100653515|100653515|differential display clone 8##NM_001243541|LOC100653515|100653515|differential display clone 8##X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2##M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2##J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2##S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2##BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2	0.657676	CTCF.p2:1:0.658
chr17	7977053	7977179	reg1009384.p1	11.901	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	-16914	+	AK298095 NM_001039130 NM_001039131 NM_001141 AK292779 AK300554 BC063647 U78294 BC035217 BC033294 AB590334 DQ891345 EU176579 AF468051 AF468052 AF468053 AF468054	-34704	+	DQ426876 NM_000180 M92432	-71165	+	TSC_hg19_v1_chr17_+_7982776 AK096086 BC046191	5659	+	AF038461 NM_001139	13904	-	AJ269499 AK313677 NM_021628	44716	-	AK298095|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039130|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039131|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001141|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK292779|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK300554|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC063647|ALOX15B|247|arachidonate 15-lipoxygenase, type B##U78294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC035217|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC033294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##DQ891345|ALOX15B|247|arachidonate 15-lipoxygenase, type B##EU176579|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468051|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468052|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468053|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468054|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_000180|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##M92432|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##AF038461|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##NM_001139|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##AJ269499|ALOXE3|59344|arachidonate lipoxygenase 3##AK313677|ALOXE3|59344|arachidonate lipoxygenase 3##NM_021628|ALOXE3|59344|arachidonate lipoxygenase 3	0.992628	CTCF.p2:20:0.993
chr17	53591488	53591617	reg1006546.p2	11.900	+	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	-92297	-	TSC_hg19_v1_chr17_+_53344967 AK295726 AK074289	-246566	+	AK290043 TSC_hg19_v1_chr17_+_53343204	-248365	+	BC010128 AK001832 NM_018286	208597	-	AK095175 NM_001099640	217910	-	NM_021213 TSC_hg19_v1_chr17_+_53828339 AF087857 AF151638	236823	+	CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##AK295726|HLF|3131|hepatic leukemia factor##AK074289|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100##NM_021213|PCTP|58488|phosphatidylcholine transfer protein##AF087857|PCTP|58488|phosphatidylcholine transfer protein##AF151638|PCTP|58488|phosphatidylcholine transfer protein	0.999928	CTCF.p2:7:1.000
chr12	55462353	55462461	reg1007481.p1	11.899	+	NM_021191 AK314136	-48637	+	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	-83905	-	BC132732 BC132734 NM_001098815	-86786	-	BC136988 NM_001005243	61101	+	AB529271 NM_001005280	152401	+	BC140754 NM_001005490	178619	+	NM_021191|NEUROD4|58158|neurogenic differentiation 4##AK314136|NEUROD4|58158|neurogenic differentiation 4##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7##BC140754|OR6C74|254783|olfactory receptor, family 6, subfamily C, member 74##NM_001005490|OR6C74|254783|olfactory receptor, family 6, subfamily C, member 74	0.151857	
chr22	25730177	25730282	reg1006715.p3	11.898	+	NM_000496	-114618	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	-134385	+	TSC_hg19_v1_chr22_+_25591072 AK025418	-139100	+	AL137651 NM_182492	28294	-	BC139736 NM_001135772	47314	-	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	113847	+	NM_000496|CRYBB2|1415|crystallin, beta B2##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##AK025418|KIAA1671|85379|KIAA1671##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1	0.985187	CTCF.p2:-1:0.985
chr22	37374201	37374328	reg1007328.p3	11.897	+	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	-64606	+	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	-117156	+	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	-158745	-	BC042635 CR456416 NM_001163857 NM_178552	29593	-	D87292 TSC_hg19_v1_chr22_-_37415489 AK091874 BC010148 AK000862 AK223521 AK301300 NM_003312	41217	-	NM_001013436 NM_001130517 NM_021126 TSC_hg19_v1_chr22_+_37415789	41481	+	BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##BC042635|C22orf33|339669|chromosome 22 open reading frame 33##CR456416|C22orf33|339669|chromosome 22 open reading frame 33##NM_001163857|C22orf33|339669|chromosome 22 open reading frame 33##NM_178552|C22orf33|339669|chromosome 22 open reading frame 33##D87292|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK091874|TST|7263|thiosulfate sulfurtransferase (rhodanese)##BC010148|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK000862|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK223521|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK301300|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_003312|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_001013436|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001130517|MPST|4357|mercaptopyruvate sulfurtransferase##NM_021126|MPST|4357|mercaptopyruvate sulfurtransferase	0.99678	CTCF.p2:18:0.997
chr4	41283188	41283325	reg1008263.p1	11.897	+	TSC_hg19_v1_chr4_+_41258944 AK054579 AK315368 BC006305 BC005117 DQ891998 DQ895188 AB590113 AB209038 X04741	-24281	+	TSC_hg19_v1_chr4_+_41258913 BC000332 BC018838	-24338	+	TSC_hg19_v1_chr4_+_41258897 NM_004181	-24360	+	TSC_hg19_v1_chr4_+_41361623 CR936610	78374	+	TSC_hg19_v1_chr4_+_41362643 BC053639	79372	+	TSC_hg19_v1_chr4_+_41362781 CR933645 CR936664 AB029025 NM_001112717 NM_001112718 NM_014988 CR936658 CR936601	79536	+	AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##CR936610|LIMCH1|22998|LIM and calponin homology domains 1##BC053639|LIMCH1|22998|LIM and calponin homology domains 1##CR933645|LIMCH1|22998|LIM and calponin homology domains 1##CR936664|LIMCH1|22998|LIM and calponin homology domains 1##AB029025|LIMCH1|22998|LIM and calponin homology domains 1##NM_001112717|LIMCH1|22998|LIM and calponin homology domains 1##NM_001112718|LIMCH1|22998|LIM and calponin homology domains 1##NM_014988|LIMCH1|22998|LIM and calponin homology domains 1##CR936658|LIMCH1|22998|LIM and calponin homology domains 1##CR936601|LIMCH1|22998|LIM and calponin homology domains 1	0.998892	CTCF.p2:-14:0.999
chr12	104278163	104278281	reg1008222.p1	11.896	+	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	-43243	-	AB032773 TSC_hg19_v1_chr12_-_104234857	-43398	-	AY311388 AJ295695 NM_017564 AB052958	-297161	+	TSC_hg19_v1_chr12_+_104324159 AJ890084 AK025459	45936	+	TSC_hg19_v1_chr12_+_104324187 AK298996 AK300521 NM_003299 S74939 X15187	45965	+	TSC_hg19_v1_chr12_+_104324199 BC066656	45977	+	BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AJ890084|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK025459|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK298996|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK300521|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##NM_003299|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##X15187|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##BC066656|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1	0.0	
chr1	40870603	40870726	reg1005759.p1	11.895	+	AK316218 NM_001198980 AK298702	-8176	+	AK308280 NM_001198979	-11648	+	NM_001198978 AK303975 AL133206	-30338	+	AK091612 AX747095 AL137241 TSC_hg19_v1_chr1_+_40915792	45136	+	NM_023070	45672	+	TSC_hg19_v1_chr1_+_40942884 BC041873	72218	+	AK316218|SMAP2|64744|small ArfGAP2##NM_001198980|SMAP2|64744|small ArfGAP2##AK298702|SMAP2|64744|small ArfGAP2##AK308280|SMAP2|64744|small ArfGAP2##NM_001198979|SMAP2|64744|small ArfGAP2##NM_001198978|SMAP2|64744|small ArfGAP2##AK303975|SMAP2|64744|small ArfGAP2##AL133206|SMAP2|64744|small ArfGAP2##AK091612|ZNF643|65243|zinc finger protein 643##AL137241|ZNF643|65243|zinc finger protein 643##NM_023070|ZNF643|65243|zinc finger protein 643##BC041873|ZNF642|339559|zinc finger protein 642	0.995079	CTCF.p2:32:0.995
chr21	38300037	38300155	reg1007005.p1	11.894	+	NM_005069 NM_009586 BC110444	-228091	+	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	-228656	+	AJ566766 NM_001146077	-351230	-	TSC_hg19_v1_chr21_-_38338991 AK307940 NM_001242784	38763	-	AJ001864 TSC_hg19_v1_chr21_-_38352974	52854	-	TSC_hg19_v1_chr21_-_38353235 NM_001242785	53144	-	NM_005069|SIM2|6493|single-minded homolog 2 (Drosophila)##NM_009586|SIM2|6493|single-minded homolog 2 (Drosophila)##BC110444|SIM2|6493|single-minded homolog 2 (Drosophila)##AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14##AK307940|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_001242784|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##AJ001864|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_001242785|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)	0.146963	
chr4	46273154	46273267	reg1006482.p1	11.893	+	CU689108 DQ890976 DQ894150 CR933628 BC031087 AK289806 AK299884 BX648937 NM_173536 AK122845	-147197	-	TSC_hg19_v1_chr4_-_44728574 AK296051 AB209904 AK055639 AY173948 AK129655 AK308920 AF247786 NM_138335	-1544646	-	TSC_hg19_v1_chr4_+_44680469 NM_021927 BX647242 BC036768 BC012338 AK225314 AK023282 AK308667	-1592750	+	TSC_hg19_v1_chr4_-_46391400 AK125179 NM_001114175	118189	-	TSC_hg19_v1_chr4_-_46391484 AK307128	118303	-	AB209295 AK293466 S62907 TSC_hg19_v1_chr4_-_46391998 NM_000807	118703	-	DQ890976|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##DQ894150|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##CR933628|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BC031087|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK289806|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK299884|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BX648937|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##NM_173536|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK122845|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_021927|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BX647242|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC036768|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC012338|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK225314|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK023282|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK308667|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK125179|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_001114175|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK307128|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AB209295|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK293466|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##S62907|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_000807|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2	0.934932	CTCF.p2:9:0.935
chr8	145151043	145151158	reg1006623.p1	11.893	+	TSC_hg19_v1_chr8_+_145149987 BC001006 X06994 BC015616 BC020566 BT019798 CR541674 DQ891486 DQ894671 BC024650	-1093	+	TSC_hg19_v1_chr8_+_145149979 AK026633	-1119	+	TSC_hg19_v1_chr8_+_145149972 AK225796 NM_001916	-1145	+	TSC_hg19_v1_chr8_-_145158677 BC034028	7577	-	AL136816 FJ655995 TSC_hg19_v1_chr8_-_145159076	7876	-	TSC_hg19_v1_chr8_-_145159154 AK075518 AB052764 AB052765 BC025244 NM_030974	8051	-	BC001006|CYC1|1537|cytochrome c-1##X06994|CYC1|1537|cytochrome c-1##BC015616|CYC1|1537|cytochrome c-1##BC020566|CYC1|1537|cytochrome c-1##BT019798|CYC1|1537|cytochrome c-1##CR541674|CYC1|1537|cytochrome c-1##DQ891486|CYC1|1537|cytochrome c-1##DQ894671|CYC1|1537|cytochrome c-1##BC024650|CYC1|1537|cytochrome c-1##AK026633|CYC1|1537|cytochrome c-1##AK225796|CYC1|1537|cytochrome c-1##NM_001916|CYC1|1537|cytochrome c-1##BC034028|SHARPIN|81858|SHANK-associated RH domain interactor##AL136816|SHARPIN|81858|SHANK-associated RH domain interactor##FJ655995|SHARPIN|81858|SHANK-associated RH domain interactor##AK075518|SHARPIN|81858|SHANK-associated RH domain interactor##AB052764|SHARPIN|81858|SHANK-associated RH domain interactor##AB052765|SHARPIN|81858|SHANK-associated RH domain interactor##BC025244|SHARPIN|81858|SHANK-associated RH domain interactor##NM_030974|SHARPIN|81858|SHANK-associated RH domain interactor	0.999462	CTCF.p2:3:0.999
chr13	41796504	41796623	reg1006674.p2	11.892	+	TSC_hg19_v1_chr13_-_41768706 AK299614 AL136782 AK315589 BC022033 FJ150424 NM_032138 AK091344 AX746923	-27938	-	CR533558 CU692470 AB464601 AM393035 AM393575 DQ890838 DQ893994 TSC_hg19_v1_chr13_-_41768505	-28106	-	AL833839 EU832523 EU832605 BC051349 TSC_hg19_v1_chr13_-_41706883 BC000560 AK056633 AK299627 AK096608 NM_152903	-89768	-	AK055086 AF072934 TSC_hg19_v1_chr13_-_41837713 BC027731 BC038427 BC042196 BC065496 NM_004294 AK294343	41117	-	NM_001110798 NM_018527 NM_024561 TSC_hg19_v1_chr13_+_41885376 BC064592 BC032318 AK291248 AK097224 BX640665 BC101719 BC101721 BC143506 CU689326	88939	+	TSC_hg19_v1_chr13_+_42031539 NM_014059	234988	+	AK299614|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AL136782|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK315589|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##BC022033|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##FJ150424|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_032138|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK091344|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##CR533558|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AM393035|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AM393575|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##DQ890838|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##DQ893994|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AL833839|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##EU832523|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##EU832605|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##BC051349|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##BC000560|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##AK056633|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##AK299627|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##AK096608|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##NM_152903|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##AK055086|MTRF1|9617|mitochondrial translational release factor 1##AF072934|MTRF1|9617|mitochondrial translational release factor 1##BC027731|MTRF1|9617|mitochondrial translational release factor 1##BC038427|MTRF1|9617|mitochondrial translational release factor 1##BC042196|MTRF1|9617|mitochondrial translational release factor 1##BC065496|MTRF1|9617|mitochondrial translational release factor 1##NM_004294|MTRF1|9617|mitochondrial translational release factor 1##AK294343|MTRF1|9617|mitochondrial translational release factor 1##NM_001110798|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_018527|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_024561|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC064592|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC032318|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK291248|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK097224|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BX640665|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101719|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101721|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC143506|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15	0.583314	CTCF.p2:0:0.583
chr19	50860441	50860572	reg1006502.p1	11.892	+	BC085008 BC006149 BC111705 BC040958 BC053864 BC065203 BC032360 AF090387 AF098485 AF200344 AK300884 BC019048 AK310134 TSC_hg19_v1_chr19_-_50848025	-12514	-	AF055989 NM_004977	-27873	-	BC007877 TSC_hg19_v1_chr19_+_50796867	-63662	+	AF090386 DQ891993 DQ895183 CU676086 AF200345 BC029397 AK308013 AK314364 BC017842 AF098484 NM_004851	8397	-	TSC_hg19_v1_chr19_+_50879744 NM_007121 AK297978 BC047750 CR749648 U07132 BC074500 AK290855 BC033500	19221	+	AB209560 TSC_hg19_v1_chr19_+_50887563	27019	+	BC085008|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC006149|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC111705|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC040958|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC053864|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC065203|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC032360|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF090387|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF098485|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF200344|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK300884|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC019048|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK310134|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF055989|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##NM_004977|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##BC007877|MYH14|79784|myosin, heavy chain 14, non-muscle##AF090386|NAPSA|9476|napsin A aspartic peptidase##DQ891993|NAPSA|9476|napsin A aspartic peptidase##DQ895183|NAPSA|9476|napsin A aspartic peptidase##AF200345|NAPSA|9476|napsin A aspartic peptidase##BC029397|NAPSA|9476|napsin A aspartic peptidase##AK308013|NAPSA|9476|napsin A aspartic peptidase##AK314364|NAPSA|9476|napsin A aspartic peptidase##BC017842|NAPSA|9476|napsin A aspartic peptidase##AF098484|NAPSA|9476|napsin A aspartic peptidase##NM_004851|NAPSA|9476|napsin A aspartic peptidase##NM_007121|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##AK297978|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##BC047750|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##CR749648|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##U07132|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##BC074500|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##AK290855|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##BC033500|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##AB209560|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa	0.993932	CTCF.p2:-7:0.994
chr6	117877185	117877327	reg1008646.p1	11.892	+	TSC_hg19_v1_chr6_+_117803805 BC035671 NM_173674 AK095973	-73419	+	M34353 NM_002944 TSC_hg19_v1_chr6_-_117747031	-130225	-	AY056583 NM_153453 TSC_hg19_v1_chr6_+_117586720 AJ578053 NM_182645 BC100798 BC100799 BC118545 BC118622 BC069316 AK096878	-290445	+	CU679397 TSC_hg19_v1_chr6_-_117923611 AF287894	46275	-	TSC_hg19_v1_chr6_-_117923643 BC009553 AY033606 AB209385	46377	-	TSC_hg19_v1_chr6_-_117923675 AK314486	46417	-	BC035671|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##NM_173674|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AK095973|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##AY056583|VGLL2|245806|vestigial like 2 (Drosophila)##NM_153453|VGLL2|245806|vestigial like 2 (Drosophila)##AJ578053|VGLL2|245806|vestigial like 2 (Drosophila)##NM_182645|VGLL2|245806|vestigial like 2 (Drosophila)##BC100798|VGLL2|245806|vestigial like 2 (Drosophila)##BC100799|VGLL2|245806|vestigial like 2 (Drosophila)##BC118545|VGLL2|245806|vestigial like 2 (Drosophila)##BC118622|VGLL2|245806|vestigial like 2 (Drosophila)##BC069316|VGLL2|245806|vestigial like 2 (Drosophila)##AK096878|VGLL2|245806|vestigial like 2 (Drosophila)##AF287894|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##BC009553|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AY033606|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AB209385|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AK314486|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing	0.999923	CTCF.p2:0:1.000
chr7	129007554	129007694	reg1006717.p1	11.892	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	-142795	+	BC009989 NM_005631	-178912	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-312419	-	TSC_hg19_v1_chr7_+_129007981 NM_001130723	362	+	TSC_hg19_v1_chr7_+_129008062 AK025372	464	+	AK316073 NM_001130722	7859	+	NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2##AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2	0.977337	CTCF.p2:-16:0.977
chr17	14205985	14206106	reg1007772.p1	11.891	+	TSC_hg19_v1_chr17_+_14204397 AK023723 BC063301 AF105377 NM_006041 BC069664 BC069725	-1600	+	NM_001007530 BC146859 BC071823	-65882	-	TSC_hg19_v1_chr17_+_13972841 BC000060 BC006394 U09466 AK294213 AK295925 BT006985 CU674016 DQ893604 DQ895073	-233164	+	CR541931 CR541953 M94048 NM_153322 S61788 TSC_hg19_v1_chr17_-_15164113	958035	-	AK300690 L03203 TSC_hg19_v1_chr17_-_15165834	959774	-	AK290640 TSC_hg19_v1_chr17_-_15165870 BC019040	959820	-	AK023723|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC063301|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##AF105377|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##NM_006041|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC069664|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC069725|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##NM_001007530|CDRT15|146822|CMT1A duplicated region transcript 15##BC146859|CDRT15|146822|CMT1A duplicated region transcript 15##BC071823|CDRT15|146822|CMT1A duplicated region transcript 15##BC000060|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##BC006394|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##U09466|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK294213|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK295925|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##BT006985|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##DQ893604|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##DQ895073|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##CR541931|PMP22|5376|peripheral myelin protein 22##CR541953|PMP22|5376|peripheral myelin protein 22##M94048|PMP22|5376|peripheral myelin protein 22##NM_153322|PMP22|5376|peripheral myelin protein 22##S61788|PMP22|5376|peripheral myelin protein 22##AK300690|PMP22|5376|peripheral myelin protein 22##L03203|PMP22|5376|peripheral myelin protein 22##AK290640|PMP22|5376|peripheral myelin protein 22##BC019040|PMP22|5376|peripheral myelin protein 22	0.015625	
chr22	32925054	32925178	reg1008500.p1	11.891	+	NM_001033024 TSC_hg19_v1_chr22_+_32871279 AK297841 AK301716	-53836	+	TSC_hg19_v1_chr22_+_32870997 BX648151 BX648220	-54115	+	TSC_hg19_v1_chr22_+_32870950 AK291972 AF233225 AB385082 AM392740 CU013088 CU013376 EU176789 EU176790	-54156	+	NM_000362	271685	+	TSC_hg19_v1_chr22_+_33197690 AK311702 AK314871 AK298126 BC013086 U14394 AX801509 U02571 S78453 U67195	272578	+	BC014277 TSC_hg19_v1_chr22_+_33197759	272636	+	NM_001033024|FBXO7|25793|F-box protein 7##AK297841|FBXO7|25793|F-box protein 7##AK301716|FBXO7|25793|F-box protein 7##BX648151|FBXO7|25793|F-box protein 7##BX648220|FBXO7|25793|F-box protein 7##AK291972|FBXO7|25793|F-box protein 7##AF233225|FBXO7|25793|F-box protein 7##AM392740|FBXO7|25793|F-box protein 7##CU013088|FBXO7|25793|F-box protein 7##CU013376|FBXO7|25793|F-box protein 7##EU176789|FBXO7|25793|F-box protein 7##EU176790|FBXO7|25793|F-box protein 7##NM_000362|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK314871|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK298126|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC013086|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U14394|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U02571|TIMP3|7078|TIMP metallopeptidase inhibitor 3##S78453|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U67195|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3	0.998884	CTCF.p2:-12:0.999
chr15	32680340	32680476	reg1009583.p1	11.890	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-357665	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-517465	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-517579	-	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	227354	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	253506	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	329849	+	AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1	1.122672	CTCF.p2:2:1.000
chr5	42909110	42909229	reg1007222.p2	11.890	+	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	-97178	-	AK303469 NM_001134848 AK127368 BC015985 BC039102 TSC_hg19_v1_chr5_+_42756958	-152231	+	BC136496 NM_001242460 NM_001242461 NM_001242462	-343205	+	TSC_hg19_v1_chr5_-_42993436 AK056817	84277	-	AB463523 BC067873 AY032883 NM_001014279	131127	-	AK307963 TSC_hg19_v1_chr5_+_43121018 BC045109	211832	+	Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK303469|CCDC152|100129792|coiled-coil domain containing 152##NM_001134848|CCDC152|100129792|coiled-coil domain containing 152##AK127368|CCDC152|100129792|coiled-coil domain containing 152##BC015985|CCDC152|100129792|coiled-coil domain containing 152##BC039102|CCDC152|100129792|coiled-coil domain containing 152##BC136496|GHR|2690|growth hormone receptor##NM_001242460|GHR|2690|growth hormone receptor##NM_001242461|GHR|2690|growth hormone receptor##NM_001242462|GHR|2690|growth hormone receptor##AK056817|FLJ32255|643977|uncharacterized LOC643977##BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39##AK307963|ZNF131|7690|zinc finger protein 131	0.0	
chr10	13414016	13414130	reg1006939.p1	11.889	+	TSC_hg19_v1_chr10_-_13390214 U34044 BC063816 GU954545 GU954546 GU954547 GU954548 GU954549 NM_001195602 NM_001195604 NM_012247	-23806	-	TSC_hg19_v1_chr10_-_13390036 AK301568 AK309829	-24034	-	TSC_hg19_v1_chr10_-_13342064 AF023462 BC029512 AF112977 BC021011 NM_006214	-71977	-	BC031618 AK097602 NM_001100912 NM_152751	130886	-	NM_003675 TSC_hg19_v1_chr10_+_13628948	214870	+	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	214914	+	U34044|SEPHS1|22929|selenophosphate synthetase 1##BC063816|SEPHS1|22929|selenophosphate synthetase 1##GU954545|SEPHS1|22929|selenophosphate synthetase 1##GU954546|SEPHS1|22929|selenophosphate synthetase 1##GU954547|SEPHS1|22929|selenophosphate synthetase 1##GU954548|SEPHS1|22929|selenophosphate synthetase 1##GU954549|SEPHS1|22929|selenophosphate synthetase 1##NM_001195602|SEPHS1|22929|selenophosphate synthetase 1##NM_001195604|SEPHS1|22929|selenophosphate synthetase 1##NM_012247|SEPHS1|22929|selenophosphate synthetase 1##AK301568|SEPHS1|22929|selenophosphate synthetase 1##AK309829|SEPHS1|22929|selenophosphate synthetase 1##AF023462|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC029512|PHYH|5264|phytanoyl-CoA 2-hydroxylase##AF112977|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC021011|PHYH|5264|phytanoyl-CoA 2-hydroxylase##NM_006214|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC031618|BEND7|222389|BEN domain containing 7##AK097602|BEND7|222389|BEN domain containing 7##NM_001100912|BEND7|222389|BEN domain containing 7##NM_152751|BEND7|222389|BEN domain containing 7##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)	0.899502	CTCF.p2:-4:0.900
chr11	69059942	69060099	reg1005903.p1	11.887	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-202494	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-243594	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-243670	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	1602	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	395836	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	395890	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.982697	CTCF.p2:-26:0.983
chr18	14086721	14086827	reg1006439.p2	11.887	+	AK315319 BC094710 NM_000529 AK289381	-171238	-	BC095531 NM_005913	-261232	+	TSC_hg19_v1_chr18_+_13726671 AK296370 BC017816 BX647977 AK303842 BC005290 AK292561 AB007858 AF067791 NM_003799 AB020966 BC036798	-360084	+	BC010705 AK096748 BC024227 BC037787 NM_145287	45683	-	TSC_hg19_v1_chr18_+_14179298 BC127726	92535	+	BC140940 BX649118 AK307658 NM_001137671	456770	-	AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC095531|MC5R|4161|melanocortin 5 receptor##NM_005913|MC5R|4161|melanocortin 5 receptor##AK296370|RNMT|8731|RNA (guanine-7-) methyltransferase##BC017816|RNMT|8731|RNA (guanine-7-) methyltransferase##BX647977|RNMT|8731|RNA (guanine-7-) methyltransferase##AK303842|RNMT|8731|RNA (guanine-7-) methyltransferase##BC005290|RNMT|8731|RNA (guanine-7-) methyltransferase##AK292561|RNMT|8731|RNA (guanine-7-) methyltransferase##AB007858|RNMT|8731|RNA (guanine-7-) methyltransferase##AF067791|RNMT|8731|RNA (guanine-7-) methyltransferase##NM_003799|RNMT|8731|RNA (guanine-7-) methyltransferase##AB020966|RNMT|8731|RNA (guanine-7-) methyltransferase##BC036798|RNMT|8731|RNA (guanine-7-) methyltransferase##BC010705|ZNF519|162655|zinc finger protein 519##AK096748|ZNF519|162655|zinc finger protein 519##BC024227|ZNF519|162655|zinc finger protein 519##BC037787|ZNF519|162655|zinc finger protein 519##NM_145287|ZNF519|162655|zinc finger protein 519##BC127726|ANKRD20A5P|440482|ankyrin repeat domain 20 family, member A5, pseudogene##BC140940|POTEC|388468|POTE ankyrin domain family, member C##BX649118|POTEC|388468|POTE ankyrin domain family, member C##AK307658|POTEC|388468|POTE ankyrin domain family, member C##NM_001137671|POTEC|388468|POTE ankyrin domain family, member C	0.034573	
chr19	2275200	2275337	reg1007048.p2	11.887	+	TSC_hg19_v1_chr19_+_2269534 BC100291 BC013037 BC010063 BC081537 BC007247 BC053360 D87914 BC055397 U09202 BC093652 BC112133	-5726	+	TSC_hg19_v1_chr19_+_2269526 BC042364	-5742	+	TSC_hg19_v1_chr19_+_2269523 AK307221 NM_004152 AK309122	-5748	+	AK127680 BC107678 NM_198532	6909	-	TSC_hg19_v1_chr19_+_2289998 AK091795 AX747191	14729	+	NM_001101391	32887	-	BC100291|OAZ1|4946|ornithine decarboxylase antizyme 1##BC013037|OAZ1|4946|ornithine decarboxylase antizyme 1##BC010063|OAZ1|4946|ornithine decarboxylase antizyme 1##BC081537|OAZ1|4946|ornithine decarboxylase antizyme 1##BC007247|OAZ1|4946|ornithine decarboxylase antizyme 1##BC053360|OAZ1|4946|ornithine decarboxylase antizyme 1##D87914|OAZ1|4946|ornithine decarboxylase antizyme 1##BC055397|OAZ1|4946|ornithine decarboxylase antizyme 1##U09202|OAZ1|4946|ornithine decarboxylase antizyme 1##BC093652|OAZ1|4946|ornithine decarboxylase antizyme 1##BC112133|OAZ1|4946|ornithine decarboxylase antizyme 1##BC042364|OAZ1|4946|ornithine decarboxylase antizyme 1##AK307221|OAZ1|4946|ornithine decarboxylase antizyme 1##NM_004152|OAZ1|4946|ornithine decarboxylase antizyme 1##AK309122|SPPL2B|56928|signal peptide peptidase-like 2B##AK127680|C19orf35|374872|chromosome 19 open reading frame 35##BC107678|C19orf35|374872|chromosome 19 open reading frame 35##NM_198532|C19orf35|374872|chromosome 19 open reading frame 35##NM_001101391|LINGO3|645191|leucine rich repeat and Ig domain containing 3	0.170718	
chr8	8105447	8105578	reg1006944.p1	11.887	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-19370	+	AK292586 NM_001193630	-321654	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-353308	+	TSC_hg19_v1_chr8_-_8175862 AF075060	70376	-	AK122582 NM_001080826	133710	-	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	454186	+	BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23	0.989624	CTCF.p2:-6:0.990
chr14	100850147	100850278	reg1008778.p1	11.886	+	TSC_hg19_v1_chr14_+_100842812 NM_001161476 BX248767 AK291960 NM_024515 BC067872 AY295082	-7374	+	TSC_hg19_v1_chr14_-_100842681 NM_173701 NM_213645	-7532	-	TSC_hg19_v1_chr14_-_100842665 AK291141	-7559	-	AB527893 CU678064 EU832622 EU832695 NM_001159531	184121	-	BC002607 NM_020836	185918	-	TSC_hg19_v1_chr14_+_101193228 NM_003836 AK289384 AK297918 AK313258 BC007741 BC014015	343011	+	NM_001161476|WDR25|79446|WD repeat domain 25##BX248767|WDR25|79446|WD repeat domain 25##AK291960|WDR25|79446|WD repeat domain 25##NM_024515|WDR25|79446|WD repeat domain 25##BC067872|WDR25|79446|WD repeat domain 25##AY295082|WDR25|79446|WD repeat domain 25##NM_173701|WARS|7453|tryptophanyl-tRNA synthetase##NM_213645|WARS|7453|tryptophanyl-tRNA synthetase##AK291141|WARS|7453|tryptophanyl-tRNA synthetase##EU832622|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832695|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001159531|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##BC002607|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_020836|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_003836|DLK1|8788|delta-like 1 homolog (Drosophila)##AK289384|DLK1|8788|delta-like 1 homolog (Drosophila)##AK297918|DLK1|8788|delta-like 1 homolog (Drosophila)##AK313258|DLK1|8788|delta-like 1 homolog (Drosophila)##BC007741|DLK1|8788|delta-like 1 homolog (Drosophila)##BC014015|DLK1|8788|delta-like 1 homolog (Drosophila)	0.996221	CTCF.p2:-9:0.996
chr18	32724059	32724182	reg1008171.p1	11.886	+	TSC_hg19_v1_chr18_+_32621374 NM_014268 AK090945 AX746696 AK315766 BC007318 AB016823 AB528177 AM393705 BT020086 CR536545 CU675609 DQ892923 DQ896172 AK296251	-102664	+	NM_001143827 AK294833 TSC_hg19_v1_chr18_+_32558384	-165820	+	NM_001143826 TSC_hg19_v1_chr18_+_32557008	-167161	+	TSC_hg19_v1_chr18_+_32821018 NM_001135178 NM_032347 AF533250 AY157641 AK311533 AK027384 BC006172	96926	+	TSC_hg19_v1_chr18_-_32870201 AX721137 AK131291 AK128697 AY234408 AK303447 NM_001112734 NM_001166012	146052	-	TSC_hg19_v1_chr18_+_32870279 AK023456 AF159567 AK094216	146184	+	NM_014268|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK090945|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK315766|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##BC007318|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AB016823|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AM393705|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##BT020086|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##CR536545|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##DQ892923|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##DQ896172|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK296251|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001143827|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK294833|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001135178|ZNF397|84307|zinc finger protein 397##NM_032347|ZNF397|84307|zinc finger protein 397##AF533250|ZNF397|84307|zinc finger protein 397##AY157641|ZNF397|84307|zinc finger protein 397##AK311533|ZNF397|84307|zinc finger protein 397##AK027384|ZNF397|84307|zinc finger protein 397##BC006172|ZNF397|84307|zinc finger protein 397##AK131291|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK128697|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AY234408|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK303447|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##NM_001112734|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##NM_001166012|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK023456|ZNF271|10778|zinc finger protein 271##AF159567|ZNF271|10778|zinc finger protein 271##AK094216|ZNF271|10778|zinc finger protein 271	0.733897	CTCF.p2:7:0.734
chr5	173754413	173754536	reg1006709.p1	11.886	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-281722	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	-281763	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	-338284	+	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	397138	+	NM_000794	1116688	-	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	1151088	+	AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##NM_000794|DRD1|1812|dopamine receptor D1##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1	0.999815	CTCF.p2:1:1.000
chr11	68151525	68151645	reg1005828.p2	11.885	+	AF088027 TSC_hg19_v1_chr11_+_68115450	-36149	+	TSC_hg19_v1_chr11_+_68080058 AB017498 NM_002335 AF077820 AF064548 BC150595 BC098397	-71496	+	TSC_hg19_v1_chr11_-_68039453 NM_022338	-112127	-	TSC_hg19_v1_chr11_+_68228219 NM_001164160 NM_001164161 NM_001164162 NM_001164163 NM_001164164 NM_018312 BC070121 AK298180 AK303315 AK315136 CR936718 CR749815 CR933658 AB046778	76624	+	AK001920 TSC_hg19_v1_chr11_+_68367929	216291	+	TSC_hg19_v1_chr11_+_68451978 NM_015973	300398	+	AF088027|LRP5|4041|low density lipoprotein receptor-related protein 5##AB017498|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_002335|LRP5|4041|low density lipoprotein receptor-related protein 5##AF077820|LRP5|4041|low density lipoprotein receptor-related protein 5##AF064548|LRP5|4041|low density lipoprotein receptor-related protein 5##BC150595|LRP5|4041|low density lipoprotein receptor-related protein 5##BC098397|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_022338|C11orf24|53838|chromosome 11 open reading frame 24##NM_001164160|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164161|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164162|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164163|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164164|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_018312|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##BC070121|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK298180|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK303315|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK315136|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR936718|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR749815|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR933658|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AB046778|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK001920|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_015973|GAL|51083|galanin prepropeptide	0.997115	CTCF.p2:6:0.997
chr15	42942782	42942902	reg1007157.p1	11.885	+	TSC_hg19_v1_chr15_+_42867803 CR627426 NM_020759	-75035	+	TSC_hg19_v1_chr15_+_42841055 NM_001130447 NM_018097 AK022939 BC010903 AK001322	-101813	+	TSC_hg19_v1_chr15_-_42840992 AK094891 NM_153260	-101838	-	TSC_hg19_v1_chr15_-_43029313 BC052568 BC066640	86378	-	TSC_hg19_v1_chr15_-_43029327 AF525398 NM_138477	86525	-	AF525400 TSC_hg19_v1_chr15_-_43212975 AK131372 BC041876 NM_173500 BC071556	270140	-	NM_020759|STARD9|57519|StAR-related lipid transfer (START) domain containing 9##NM_001130447|HAUS2|55142|HAUS augmin-like complex, subunit 2##NM_018097|HAUS2|55142|HAUS augmin-like complex, subunit 2##AK022939|HAUS2|55142|HAUS augmin-like complex, subunit 2##BC010903|HAUS2|55142|HAUS augmin-like complex, subunit 2##AK001322|HAUS2|55142|HAUS augmin-like complex, subunit 2##AK094891|LRRC57|255252|leucine rich repeat containing 57##NM_153260|LRRC57|255252|leucine rich repeat containing 57##BC052568|CDAN1|146059|congenital dyserythropoietic anemia, type I##BC066640|CDAN1|146059|congenital dyserythropoietic anemia, type I##AF525398|CDAN1|146059|congenital dyserythropoietic anemia, type I##NM_138477|CDAN1|146059|congenital dyserythropoietic anemia, type I##AF525400|TTBK2|146057|tau tubulin kinase 2##AK131372|TTBK2|146057|tau tubulin kinase 2##BC041876|TTBK2|146057|tau tubulin kinase 2##NM_173500|TTBK2|146057|tau tubulin kinase 2##BC071556|TTBK2|146057|tau tubulin kinase 2	0.977555	CTCF.p2:5:0.978
chr1	93487262	93487395	reg1009028.p1	11.884	+	TSC_hg19_v1_chr1_-_93427020 BC070342 NM_001006605 NM_001252269 NM_001252270 NM_001252273	-60290	-	TSC_hg19_v1_chr1_-_93399531 BX648424	-87736	-	NM_001252271	-144622	-	TSC_hg19_v1_chr1_+_93544836 NM_001164391 NM_001164392 NM_001164393 NM_007358 AK290318 AK302900 AJ010014 AK302776 AF086908 BC010013 BC001897	57505	+	AY359039 BC016556 AF151858 TSC_hg19_v1_chr1_-_93645971 AK293308 BC016365 AK312787 CR936808 AK125882	158659	-	BC070051 NM_001167830 NM_016040	158917	-	BC070342|FAM69A|388650|family with sequence similarity 69, member A##NM_001006605|FAM69A|388650|family with sequence similarity 69, member A##NM_001252269|FAM69A|388650|family with sequence similarity 69, member A##NM_001252270|FAM69A|388650|family with sequence similarity 69, member A##NM_001252273|FAM69A|388650|family with sequence similarity 69, member A##NM_001252271|FAM69A|388650|family with sequence similarity 69, member A##NM_001164391|MTF2|22823|metal response element binding transcription factor 2##NM_001164392|MTF2|22823|metal response element binding transcription factor 2##NM_001164393|MTF2|22823|metal response element binding transcription factor 2##NM_007358|MTF2|22823|metal response element binding transcription factor 2##AK290318|MTF2|22823|metal response element binding transcription factor 2##AK302900|MTF2|22823|metal response element binding transcription factor 2##AJ010014|MTF2|22823|metal response element binding transcription factor 2##AK302776|MTF2|22823|metal response element binding transcription factor 2##AF086908|MTF2|22823|metal response element binding transcription factor 2##BC010013|MTF2|22823|metal response element binding transcription factor 2##BC001897|MTF2|22823|metal response element binding transcription factor 2##AY359039|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016556|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AF151858|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK293308|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016365|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK312787|TMED5|50999|transmembrane emp24 protein transport domain containing 5##CR936808|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK125882|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC070051|TMED5|50999|transmembrane emp24 protein transport domain containing 5##NM_001167830|TMED5|50999|transmembrane emp24 protein transport domain containing 5##NM_016040|TMED5|50999|transmembrane emp24 protein transport domain containing 5	0.212499	CTCF.p2:-14:0.212
chr2	191545138	191545272	reg1006763.p2	11.884	+	TSC_hg19_v1_chr2_+_191513840 NM_005966 BC035724 AK292446	-31239	+	TSC_hg19_v1_chr2_-_191399454 NM_001142645	-145739	-	AK296987 TSC_hg19_v1_chr2_-_191399436	-145778	-	AK289747 NM_014905 TSC_hg19_v1_chr2_+_191745546	200341	+	TSC_hg19_v1_chr2_+_191745547 BC038507 AB020645 AF158555	200352	+	TSC_hg19_v1_chr2_+_191745568 AF097495 Y08264 AF327434	200379	+	NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##NM_001142645|TMEM194B|100131211|transmembrane protein 194B##AK296987|TMEM194B|100131211|transmembrane protein 194B##AK289747|GLS|2744|glutaminase##NM_014905|GLS|2744|glutaminase##BC038507|GLS|2744|glutaminase##AB020645|GLS|2744|glutaminase##AF158555|GLS|2744|glutaminase##AF097495|GLS|2744|glutaminase##Y08264|GLS|2744|glutaminase##AF327434|GLS|2744|glutaminase	0.92387	CTCF.p2:0:0.924
chr6	87776301	87776427	reg1007761.p1	11.884	+	NM_000865	-129341	+	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	-1387927	-	TSC_hg19_v1_chr6_-_86353055 AF037448 NM_001159677 NM_006372	-1423339	-	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	28454	-	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	88925	+	TSC_hg19_v1_chr6_+_87964930 AL832366	188616	+	NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##AF037448|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159677|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_006372|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292##AL832366|ZNF292|23036|zinc finger protein 292	0.774388	CTCF.p2:-26:0.774
chr8	105454664	105454816	reg1009602.p1	11.884	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	-102688	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	-623165	+	AK126939 NM_001100117	-941765	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	24475	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	146435	-	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	146507	-	AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12	0.987995	CTCF.p2:-2:0.988
chr11	133705215	133705311	reg1006609.p2	11.883	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	-302949	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-891658	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-892249	-	AF521713 AK098717 NM_174927 BC058039	10118	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	121619	-	AJ416101 NM_001205329 NM_032801 AY358335 TSC_hg19_v1_chr11_+_133938938 AK074769 AF448478	233618	+	AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B##AJ416101|JAM3|83700|junctional adhesion molecule 3##NM_001205329|JAM3|83700|junctional adhesion molecule 3##NM_032801|JAM3|83700|junctional adhesion molecule 3##AY358335|JAM3|83700|junctional adhesion molecule 3##AK074769|JAM3|83700|junctional adhesion molecule 3##AF448478|JAM3|83700|junctional adhesion molecule 3	0.79679	CTCF.p2:11:0.797
chr16	49441958	49442104	reg1008918.p1	11.883	+	BC021181 BC021718 NM_144602 CU676858	-34203	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-126297	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	-126531	-	NM_015069	418886	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	617109	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	657862	+	BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##NM_015069|ZNF423|23090|zinc finger protein 423##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3	0.869922	CTCF.p2:-6:0.783
chr7	5279942	5280074	reg1007102.p1	11.883	+	BC016912 AF151808 NM_001033520 AY691426	-26116	+	TSC_hg19_v1_chr7_+_5229923 AB463348 AM392901 AM393618 AM393628 CU675721 AY691425 CR533530	-50023	+	TSC_hg19_v1_chr7_+_5229917 BC021012 BC021068	-50093	+	TSC_hg19_v1_chr7_+_5322595 AY485959 NM_001040661 NM_153247 AK092242 AX747426 AK296278 BC047592 BC025325	42598	+	TSC_hg19_v1_chr7_-_5460842 BC140723	180898	-	AY129022 TSC_hg19_v1_chr7_-_5461555	181533	-	BC016912|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AF151808|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033520|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY691426|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM392901|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM393618|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM393628|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY691425|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##CR533530|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021012|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021068|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY485959|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##NM_001040661|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##NM_153247|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AK092242|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AK296278|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC047592|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC025325|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AY129022|TNRC18|84629|trinucleotide repeat containing 18	0.990922	CTCF.p2:-9:0.991
chr19	40404254	40404385	reg1006628.p1	11.880	+	AK296950 TSC_hg19_v1_chr19_-_40337020 NM_001436	-67284	-	TSC_hg19_v1_chr19_-_40337007 BC019260 AK308649	-67313	-	AB463635 M59849 TSC_hg19_v1_chr19_-_40336992	-67351	-	D84239 NM_003890	36213	-	TSC_hg19_v1_chr19_+_40477090 AF020736 AK313183 NM_006503 NM_153001 BC010396 AK310135 AF038965 BC000343 BC014488 BC018811 U27515 AK290285 DQ891875 DQ894876 BT007232 CU679695	72751	+	NM_178544 AK122968 AK292528 BC045649	98666	+	AK296950|FBL|2091|fibrillarin##NM_001436|FBL|2091|fibrillarin##BC019260|FBL|2091|fibrillarin##AK308649|FBL|2091|fibrillarin##M59849|FBL|2091|fibrillarin##D84239|FCGBP|8857|Fc fragment of IgG binding protein##NM_003890|FCGBP|8857|Fc fragment of IgG binding protein##AF020736|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK313183|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_006503|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_153001|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC010396|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK310135|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AF038965|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC000343|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC014488|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC018811|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##U27515|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK290285|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##DQ891875|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##DQ894876|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BT007232|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_178544|ZNF546|339327|zinc finger protein 546##AK122968|ZNF546|339327|zinc finger protein 546##AK292528|ZNF546|339327|zinc finger protein 546##BC045649|ZNF546|339327|zinc finger protein 546	0.916756	CTCF.p2:5:0.816
chr3	10925320	10925461	reg1009357.p1	11.880	+	TSC_hg19_v1_chr3_+_10857912 AK312719 BC036083 NM_014229 S75989 AB527355	-67483	+	L20977 TSC_hg19_v1_chr3_-_10749723	-175668	-	AB210008 TSC_hg19_v1_chr3_-_10547352	-378044	-	NM_003042 TSC_hg19_v1_chr3_+_11034421	109031	+	TSC_hg19_v1_chr3_+_11034439 BC057291 BC033904	109072	+	AK289412 NM_001098213	253388	+	AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##L20977|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC057291|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC033904|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##AK289412|HRH1|3269|histamine receptor H1##NM_001098213|HRH1|3269|histamine receptor H1	0.99989	CTCF.p2:-1:0.990
chr1	36030348	36030491	reg1008941.p1	11.879	+	TSC_hg19_v1_chr1_+_36023399 NM_001014839 NM_001014841 NM_014284 AB018739 AB018740 BC024592 AB011179	-6992	+	TSC_hg19_v1_chr1_-_36023005 NM_024874	-7388	-	AK316252 TSC_hg19_v1_chr1_-_36023002	-7416	-	AY326454 BC041175 NM_178548	8551	+	AK310023 NM_001199780	66718	-	BT007137 CR456862 AB464087 DQ893539 DQ896799 TSC_hg19_v1_chr1_-_36107121 D26599 BC101836 BC105126 BC107901 BC000268 AK296956 AB209470	76664	-	NM_001014839|NCDN|23154|neurochondrin##NM_001014841|NCDN|23154|neurochondrin##NM_014284|NCDN|23154|neurochondrin##AB018739|NCDN|23154|neurochondrin##AB018740|NCDN|23154|neurochondrin##BC024592|NCDN|23154|neurochondrin##AB011179|NCDN|23154|neurochondrin##NM_024874|KIAA0319L|79932|KIAA0319-like##AK316252|KIAA0319L|79932|KIAA0319-like##AY326454|TFAP2E|339488|transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)##BC041175|TFAP2E|339488|transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)##NM_178548|TFAP2E|339488|transcription factor AP-2 epsilon (activating enhancer binding protein 2 epsilon)##AK310023|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##NM_001199780|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BT007137|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##CR456862|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##DQ893539|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##DQ896799|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##D26599|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC101836|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC105126|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC107901|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC000268|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##AK296956|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##AB209470|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2	0.998729	CTCF.p2:4:0.999
chr5	171339270	171339422	reg1006491.p1	11.876	+	BC006245 TSC_hg19_v1_chr5_+_170847089 AB007422 AB528345 AF211188 AM393798 BT019570 BT019571 DQ892736 DQ895983	-492215	+	AY358811 AF075292 NM_003862	-492684	+	AB042278 AB451236 AB451361 AB463949 BT007011 CU676967 CU677717 CU680364 CU692436 DQ892032 DQ895223 EF429251 X16934 TSC_hg19_v1_chr5_+_170815031	-524355	+	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	94182	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	94298	-	BC026213 NM_012300 NM_033644 NM_033645	94530	-	BC006245|FGF18|8817|fibroblast growth factor 18##AB007422|FGF18|8817|fibroblast growth factor 18##AF211188|FGF18|8817|fibroblast growth factor 18##AM393798|FGF18|8817|fibroblast growth factor 18##BT019570|FGF18|8817|fibroblast growth factor 18##BT019571|FGF18|8817|fibroblast growth factor 18##DQ892736|FGF18|8817|fibroblast growth factor 18##DQ895983|FGF18|8817|fibroblast growth factor 18##AY358811|FGF18|8817|fibroblast growth factor 18##AF075292|FGF18|8817|fibroblast growth factor 18##NM_003862|FGF18|8817|fibroblast growth factor 18##AB042278|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451236|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451361|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BT007011|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ892032|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ895223|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##EF429251|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##X16934|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11	0.992966	CTCF.p2:-11:0.993
chr2	177679584	177679731	reg1006642.p1	11.875	+	BC013438 TSC_hg19_v1_chr2_-_177502718	-176969	-	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-545418	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-626241	+	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	397817	+	AK311688 NM_001145412 NM_001145413	448914	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	449719	-	BC013438|LOC375295|375295|uncharacterized LOC375295##NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.372371	CTCF.p2:33:0.372
chr11	66839301	66839413	reg1007386.p1	11.874	+	TSC_hg19_v1_chr11_+_66824317 BC001338 AF498973 CU674656 DQ891124 DQ894303	-15017	+	TSC_hg19_v1_chr11_+_66824285 NM_014578	-15071	+	NM_177963 AK289672 AK289727 BC037406	-48505	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	47382	+	AK096194 TSC_hg19_v1_chr11_+_67007484	168127	+	TSC_hg19_v1_chr11_+_67007558 AB490246 AK299725	168226	+	BC001338|RHOD|29984|ras homolog gene family, member D##AF498973|RHOD|29984|ras homolog gene family, member D##DQ891124|RHOD|29984|ras homolog gene family, member D##DQ894303|RHOD|29984|ras homolog gene family, member D##NM_014578|RHOD|29984|ras homolog gene family, member D##NM_177963|SYT12|91683|synaptotagmin XII##AK289672|SYT12|91683|synaptotagmin XII##AK289727|SYT12|91683|synaptotagmin XII##BC037406|SYT12|91683|synaptotagmin XII##BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A##AK096194|LOC100131150|100131150|uncharacterized LOC100131150##AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A##AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A	0.941154	CTCF.p2:4:0.941
chr1	229650548	229650668	reg1006797.p1	11.874	+	TSC_hg19_v1_chr1_-_229644079 AK001676 NM_018230 AK304061	-6508	-	AB384686 DQ894268 EU176236 AK092339 AK314431 AX747487 TSC_hg19_v1_chr1_-_229644075 BC020107 AK304861	-6573	-	TSC_hg19_v1_chr1_-_229569842 AK096902 AK300697 BC012597 BX648545 J00068 NM_001100	-80766	-	TSC_hg19_v1_chr1_-_229694431 AB013380 BC064930 AF216833 NM_012089	43820	-	BC041094 TSC_hg19_v1_chr1_-_229761747	111137	-	NM_001025247 NM_014409 TSC_hg19_v1_chr1_-_229761804	111190	-	AK001676|NUP133|55746|nucleoporin 133kDa##NM_018230|NUP133|55746|nucleoporin 133kDa##AK304061|NUP133|55746|nucleoporin 133kDa##DQ894268|NUP133|55746|nucleoporin 133kDa##EU176236|NUP133|55746|nucleoporin 133kDa##AK092339|NUP133|55746|nucleoporin 133kDa##AK314431|NUP133|55746|nucleoporin 133kDa##BC020107|NUP133|55746|nucleoporin 133kDa##AK304861|NUP133|55746|nucleoporin 133kDa##AK096902|ACTA1|58|actin, alpha 1, skeletal muscle##AK300697|ACTA1|58|actin, alpha 1, skeletal muscle##BC012597|ACTA1|58|actin, alpha 1, skeletal muscle##BX648545|ACTA1|58|actin, alpha 1, skeletal muscle##J00068|ACTA1|58|actin, alpha 1, skeletal muscle##NM_001100|ACTA1|58|actin, alpha 1, skeletal muscle##AB013380|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##BC064930|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##AF216833|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##NM_012089|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##BC041094|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_001025247|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_014409|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa	0.907526	CTCF.p2:1:0.908
chr20	30091022	30091149	reg1007622.p1	11.874	+	AK313060 BC039813 NM_014012 AF152863	-27986	+	DQ119827 NM_001037500 AB528811	-30269	-	AY122475 NM_153324 AY358859 AY501002 BC126365 BC126391 AF479701	-62630	+	TSC_hg19_v1_chr20_+_30102254 NM_030789 NM_178580 NM_178581 NM_178582 AK314410 BC008938 BC008959 AY169310 AY169311 AY169312 AK075283 DQ168450	11163	+	AF172086 BC062595 TSC_hg19_v1_chr20_+_30102287 AF483215 AJ345029 AK074686	11196	+	TSC_hg19_v1_chr20_+_30102316 AJ420895 DQ896206 CU687568 AF515663	11248	+	AK313060|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1##BC039813|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1##NM_014012|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1##AF152863|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1##DQ119827|DEFB124|245937|defensin, beta 124##NM_001037500|DEFB124|245937|defensin, beta 124##AY122475|DEFB123|245936|defensin, beta 123##NM_153324|DEFB123|245936|defensin, beta 123##AY358859|DEFB123|245936|defensin, beta 123##BC126365|DEFB123|245936|defensin, beta 123##BC126391|DEFB123|245936|defensin, beta 123##AF479701|DEFB123|245936|defensin, beta 123##NM_030789|HM13|81502|histocompatibility (minor) 13##NM_178580|HM13|81502|histocompatibility (minor) 13##NM_178581|HM13|81502|histocompatibility (minor) 13##NM_178582|HM13|81502|histocompatibility (minor) 13##AK314410|HM13|81502|histocompatibility (minor) 13##BC008938|HM13|81502|histocompatibility (minor) 13##BC008959|HM13|81502|histocompatibility (minor) 13##AY169310|HM13|81502|histocompatibility (minor) 13##AY169311|HM13|81502|histocompatibility (minor) 13##AY169312|HM13|81502|histocompatibility (minor) 13##AK075283|HM13|81502|histocompatibility (minor) 13##DQ168450|HM13|81502|histocompatibility (minor) 13##AF172086|HM13|81502|histocompatibility (minor) 13##BC062595|HM13|81502|histocompatibility (minor) 13##AF483215|HM13|81502|histocompatibility (minor) 13##AJ345029|HM13|81502|histocompatibility (minor) 13##AK074686|HM13|81502|histocompatibility (minor) 13##AJ420895|HM13|81502|histocompatibility (minor) 13##DQ896206|HM13|81502|histocompatibility (minor) 13##AF515663|HM13|81502|histocompatibility (minor) 13	0.999793	CTCF.p2:21:1.000
chr9	70382422	70382556	reg1008240.p1	11.873	+	NM_001126334	-203675	-	AL136793 NM_001098805	-1000509	+	AF265442 BC069006 AK293173 NM_001085457	-1119935	-	NM_001099279 NM_199244	47241	-	CU688346 TSC_hg19_v1_chr9_-_70490092	107592	-	AF265442 TSC_hg19_v1_chr9_-_70490099	107609	-	NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AF265442|CBWD5|220869|COBW domain containing 5	0.99859	CTCF.p2:11:0.999
chr11	34514484	34514619	reg1009040.p1	11.872	+	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	-54002	+	TSC_hg19_v1_chr11_+_34460487 AK291585 NM_001752 BC110398 AK315350 X04076 BC112217 BC112219	-54077	+	TSC_hg19_v1_chr11_-_34379556 AK291744 NM_145804	-134996	-	AB528439 AK290817 AF115402 NM_001243081 NM_198381	18680	-	AK075197 AK290808 TSC_hg19_v1_chr11_-_34535310 AK074633 AF115403 AF049703 BC029743 AK312537 NM_001243080 NM_001422 DQ123839	20775	-	NM_001206615 NM_012153 TSC_hg19_v1_chr11_+_34642639	128062	+	AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase##AK291585|CAT|847|catalase##NM_001752|CAT|847|catalase##BC110398|CAT|847|catalase##AK315350|CAT|847|catalase##X04076|CAT|847|catalase##BC112217|CAT|847|catalase##BC112219|CAT|847|catalase##AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##AK290817|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115402|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243081|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_198381|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK075197|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK290808|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK074633|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115403|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF049703|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##BC029743|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK312537|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243080|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001422|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##DQ123839|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001206615|EHF|26298|ets homologous factor##NM_012153|EHF|26298|ets homologous factor	0.999659	CTCF.p2:17:1.000
chr1	150997172	150997290	reg1007517.p2	11.870	+	TSC_hg19_v1_chr1_+_150980936 AK315120 AF051907 AF123538 BC014886 BC025304 NM_021222 AF123539 AK294154 BC063481 DQ892819 DQ896065 AB528544	-16230	+	BC075812 AK301946 NM_001163258 NM_018379	-16385	-	BC032321 AK303962 AK125493 AK002142 NM_001163259 NM_001163260 TSC_hg19_v1_chr1_-_150979325 BC014447 NM_001040217	-18100	-	NM_001159642 NM_138278 AY033000 BC027868 AK092595 AX747620 AF193056	11828	+	TSC_hg19_v1_chr1_+_151020221 AK301712 AY358436 AK315680 AK000526 BC002469 NM_017860	23016	+	TSC_hg19_v1_chr1_-_151032050 AF187845 AF286592	34812	-	AK315120|PRUNE|58497|prune homolog (Drosophila)##AF051907|PRUNE|58497|prune homolog (Drosophila)##AF123538|PRUNE|58497|prune homolog (Drosophila)##BC014886|PRUNE|58497|prune homolog (Drosophila)##BC025304|PRUNE|58497|prune homolog (Drosophila)##NM_021222|PRUNE|58497|prune homolog (Drosophila)##AF123539|PRUNE|58497|prune homolog (Drosophila)##AK294154|PRUNE|58497|prune homolog (Drosophila)##BC063481|PRUNE|58497|prune homolog (Drosophila)##DQ892819|PRUNE|58497|prune homolog (Drosophila)##DQ896065|PRUNE|58497|prune homolog (Drosophila)##BC075812|FAM63A|55793|family with sequence similarity 63, member A##AK301946|FAM63A|55793|family with sequence similarity 63, member A##NM_001163258|FAM63A|55793|family with sequence similarity 63, member A##NM_018379|FAM63A|55793|family with sequence similarity 63, member A##BC032321|FAM63A|55793|family with sequence similarity 63, member A##AK303962|FAM63A|55793|family with sequence similarity 63, member A##AK125493|FAM63A|55793|family with sequence similarity 63, member A##AK002142|FAM63A|55793|family with sequence similarity 63, member A##NM_001163259|FAM63A|55793|family with sequence similarity 63, member A##NM_001163260|FAM63A|55793|family with sequence similarity 63, member A##BC014447|FAM63A|55793|family with sequence similarity 63, member A##NM_001040217|FAM63A|55793|family with sequence similarity 63, member A##NM_001159642|BNIPL|149428|BCL2/adenovirus E1B 19kD interacting protein like##NM_138278|BNIPL|149428|BCL2/adenovirus E1B 19kD interacting protein like##AY033000|BNIPL|149428|BCL2/adenovirus E1B 19kD interacting protein like##BC027868|BNIPL|149428|BCL2/adenovirus E1B 19kD interacting protein like##AK092595|BNIPL|149428|BCL2/adenovirus E1B 19kD interacting protein like##AF193056|BNIPL|149428|BCL2/adenovirus E1B 19kD interacting protein like##AY358436|C1orf56|54964|chromosome 1 open reading frame 56##AK315680|C1orf56|54964|chromosome 1 open reading frame 56##AK000526|C1orf56|54964|chromosome 1 open reading frame 56##BC002469|C1orf56|54964|chromosome 1 open reading frame 56##NM_017860|C1orf56|54964|chromosome 1 open reading frame 56##AF187845|CDC42SE1|56882|CDC42 small effector 1##AF286592|CDC42SE1|56882|CDC42 small effector 1	0.978207	CTCF.p2:-5:0.978
chr2	15044057	15044173	reg1006619.p1	11.870	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	-271264	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	-271294	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-2185718	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	657314	-	TSC_hg19_v1_chr2_-_15701451 BC108693 AF388385 BC131735 NM_015909 AB621813	657343	-	NM_004939 X70649	687654	+	AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence##BC108693|NBAS|51594|neuroblastoma amplified sequence##AF388385|NBAS|51594|neuroblastoma amplified sequence##BC131735|NBAS|51594|neuroblastoma amplified sequence##NM_015909|NBAS|51594|neuroblastoma amplified sequence##AB621813|NBAS|51594|neuroblastoma amplified sequence##NM_004939|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##X70649|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	1.112286	CTCF.p2:-28:0.993
chr5	151912332	151912466	reg1009344.p1	11.870	+	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	-127648	-	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	-608037	-	TSC_hg19_v1_chr5_+_151151662 X78262	-760735	+	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	957866	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	1506058	-	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	1506125	+	AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##X78262|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3	0.991026	CTCF.p2:-18:0.991
chr7	49892364	49892504	reg1009222.p1	11.870	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-79164	+	AK126220 AY204751 BX647273 NM_152701	-1681379	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-1763479	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	240390	-	NM_001161834	243247	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	451919	+	AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	0.191129	
chr8	120522039	120522183	reg1008507.p1	11.870	+	NM_002514 AK294289 AK312355 TSC_hg19_v1_chr8_+_120428685 AY082381 X96584 BC015028 CU677181 AB463923 DQ891179 DQ894361 CR457432	-93450	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	-301472	+	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	-442642	+	EU131011 DQ891628 DQ894819 D45421 L35594 AK315253 BC034961 TSC_hg19_v1_chr8_-_120651080 NM_001040092 NM_001130863 NM_006209	128951	-	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	322966	-	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	346003	-	NM_002514|NOV|4856|nephroblastoma overexpressed gene##AK294289|NOV|4856|nephroblastoma overexpressed gene##AK312355|NOV|4856|nephroblastoma overexpressed gene##AY082381|NOV|4856|nephroblastoma overexpressed gene##X96584|NOV|4856|nephroblastoma overexpressed gene##BC015028|NOV|4856|nephroblastoma overexpressed gene##DQ891179|NOV|4856|nephroblastoma overexpressed gene##DQ894361|NOV|4856|nephroblastoma overexpressed gene##CR457432|NOV|4856|nephroblastoma overexpressed gene##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##EU131011|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ891628|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ894819|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##D45421|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##L35594|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##AK315253|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC034961|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001040092|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001130863|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_006209|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)	0.997021	CTCF.p2:-29:0.997
chr12	94199	94353	reg1007130.p2	11.869	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr12_+_175945 BC024764 NM_001170738	81684	+	AK091953 AX747275 NM_015232	92265	+	NM_003044 BC036838 BC026339 NM_001122847	228461	-	BC024764|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_001170738|IQSEC3|440073|IQ motif and Sec7 domain 3##AK091953|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_015232|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_003044|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC036838|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC026339|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001122847|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12	2.079305	CTCF.p2:43:0.999	CTCF.p2:101:1.000
chr5	174871799	174871895	reg1006725.p2	11.869	+	NM_000794	-685	-	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	-720235	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-1399095	+	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	33715	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	213191	+	TSC_hg19_v1_chr5_+_175085101 AB023487	213264	+	NM_000794|DRD1|1812|dopamine receptor D1##NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2##AB023487|HRH2|3274|histamine receptor H2	0.991783	CTCF.p2:-2:0.992
chr10	13344446	13344576	reg1008862.p1	11.868	+	TSC_hg19_v1_chr10_-_13342064 AF023462 BC029512 AF112977 BC021011 NM_006214	-2415	-	TSC_hg19_v1_chr10_-_13342061 CR542055 DQ891007 DQ894185	-2462	-	NM_001037537	-2766	-	TSC_hg19_v1_chr10_-_13390036 AK301568 AK309829	45528	-	TSC_hg19_v1_chr10_-_13390214 U34044 BC063816 GU954545 GU954546 GU954547 GU954548 GU954549 NM_001195602 NM_001195604 NM_012247	45756	-	BC031618 AK097602 NM_001100912 NM_152751	200448	-	AF023462|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC029512|PHYH|5264|phytanoyl-CoA 2-hydroxylase##AF112977|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC021011|PHYH|5264|phytanoyl-CoA 2-hydroxylase##NM_006214|PHYH|5264|phytanoyl-CoA 2-hydroxylase##CR542055|PHYH|5264|phytanoyl-CoA 2-hydroxylase##DQ891007|PHYH|5264|phytanoyl-CoA 2-hydroxylase##DQ894185|PHYH|5264|phytanoyl-CoA 2-hydroxylase##NM_001037537|PHYH|5264|phytanoyl-CoA 2-hydroxylase##AK301568|SEPHS1|22929|selenophosphate synthetase 1##AK309829|SEPHS1|22929|selenophosphate synthetase 1##U34044|SEPHS1|22929|selenophosphate synthetase 1##BC063816|SEPHS1|22929|selenophosphate synthetase 1##GU954545|SEPHS1|22929|selenophosphate synthetase 1##GU954546|SEPHS1|22929|selenophosphate synthetase 1##GU954547|SEPHS1|22929|selenophosphate synthetase 1##GU954548|SEPHS1|22929|selenophosphate synthetase 1##GU954549|SEPHS1|22929|selenophosphate synthetase 1##NM_001195602|SEPHS1|22929|selenophosphate synthetase 1##NM_001195604|SEPHS1|22929|selenophosphate synthetase 1##NM_012247|SEPHS1|22929|selenophosphate synthetase 1##BC031618|BEND7|222389|BEN domain containing 7##AK097602|BEND7|222389|BEN domain containing 7##NM_001100912|BEND7|222389|BEN domain containing 7##NM_152751|BEND7|222389|BEN domain containing 7	0.051097	
chr7	84652517	84652647	reg1007082.p1	11.868	+	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-828260	-	NM_012431	-1374104	-	AK303925 NM_001178129	-1381836	-	NM_152754	98664	-	AK309116 TSC_hg19_v1_chr7_-_84816296	163653	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	1620643	+	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3	0.984555	CTCF.p2:6:0.985
chr10	76779246	76779384	reg1009071.p1	11.867	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-192961	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-842728	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-842785	+	AY686755 NM_001003892 BC137321 BC137322	38990	-	AB027004 AB103375 NM_016364	79932	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	89599	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.962768	CTCF.p2:16:0.963
chr11	13365797	13365939	reg1009875.p1	11.867	+	TSC_hg19_v1_chr11_+_13299403 BC031214 BC034314	-66413	+	TSC_hg19_v1_chr11_+_13299376 AF044288 AK095749	-66486	+	TSC_hg19_v1_chr11_+_13299375 U60415	-66495	+	AK298226 TSC_hg19_v1_chr11_-_13484770 AK310935 AK292392 AK095946 BC005071 AL832981 NM_032320 AF329102	118923	-	V00597 BC096142 BC096143 BC096144 BC096145 NM_000315	151677	-	TSC_hg19_v1_chr11_+_13690212 NM_032228 AY358784	324322	+	BC031214|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AF044288|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK095749|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##U60415|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK298226|BTBD10|84280|BTB (POZ) domain containing 10##AK310935|BTBD10|84280|BTB (POZ) domain containing 10##AK292392|BTBD10|84280|BTB (POZ) domain containing 10##AK095946|BTBD10|84280|BTB (POZ) domain containing 10##BC005071|BTBD10|84280|BTB (POZ) domain containing 10##AL832981|BTBD10|84280|BTB (POZ) domain containing 10##NM_032320|BTBD10|84280|BTB (POZ) domain containing 10##AF329102|BTBD10|84280|BTB (POZ) domain containing 10##V00597|PTH|5741|parathyroid hormone##BC096142|PTH|5741|parathyroid hormone##BC096143|PTH|5741|parathyroid hormone##BC096144|PTH|5741|parathyroid hormone##BC096145|PTH|5741|parathyroid hormone##NM_000315|PTH|5741|parathyroid hormone##NM_032228|FAR1|84188|fatty acyl CoA reductase 1##AY358784|FAR1|84188|fatty acyl CoA reductase 1	0.998726	CTCF.p2:1:0.999
chr9	15211592	15211715	reg1008400.p1	11.867	+	BX537574 NM_144966	-300661	-	AB160987 TSC_hg19_v1_chr9_-_14869016	-342654	-	BC031064 NM_001177704	-432123	-	AK301427 NM_001168342	38502	-	TSC_hg19_v1_chr9_-_15307215 BC070139 AK301185 AK298581 AK091187 AX746836	95547	-	TSC_hg19_v1_chr9_-_15307325 AK298998 BC142985 AK310482 NM_001168339 NM_001168340 NM_001168341 NM_152574	95691	-	BX537574|FREM1|158326|FRAS1 related extracellular matrix 1##NM_144966|FREM1|158326|FRAS1 related extracellular matrix 1##AB160987|FREM1|158326|FRAS1 related extracellular matrix 1##BC031064|FREM1|158326|FRAS1 related extracellular matrix 1##NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1##AK301427|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168342|TTC39B|158219|tetratricopeptide repeat domain 39B##BC070139|TTC39B|158219|tetratricopeptide repeat domain 39B##AK301185|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298581|TTC39B|158219|tetratricopeptide repeat domain 39B##AK091187|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298998|TTC39B|158219|tetratricopeptide repeat domain 39B##BC142985|TTC39B|158219|tetratricopeptide repeat domain 39B##AK310482|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168339|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168340|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168341|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_152574|TTC39B|158219|tetratricopeptide repeat domain 39B	0.973093	CTCF.p2:-5:0.973
chr16	28338357	28338473	reg1007764.p1	11.866	+	TSC_hg19_v1_chr16_+_28303845 AY874862 NM_001024401	-34634	+	TSC_hg19_v1_chr16_-_28303389 AK091456 AX746995	-35037	-	TSC_hg19_v1_chr16_-_28223181 AB002368 NM_015171	-115240	-	DQ891632 DQ894822 AB527254 BC157849 BC071705 AK000739 AK293264 AY762099 TSC_hg19_v1_chr16_-_28415133 BC000533 BC001571	76626	-	AK055366 AK299421 AK303790 AK304500 TSC_hg19_v1_chr16_-_28415162 AK301233 AK301183 NM_001099661 BC107692 NM_001037808 NM_003752	76742	-	BC157842 AK292155 NM_001199142	99303	-	AY874862|SBK1|388228|SH3-binding domain kinase 1##NM_001024401|SBK1|388228|SH3-binding domain kinase 1##AB002368|XPO6|23214|exportin 6##NM_015171|XPO6|23214|exportin 6##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C	0.843486	CTCF.p2:-9:0.843
chr22	23035371	23035516	reg1006757.p1	11.866	+	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	-6240	+	TSC_hg19_v1_chr22_+_23010757 L29162	-24683	+	NM_199127 X98922 CU686896 BC069534	-46645	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	5075	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	19439	+	TSC_hg19_v1_chr22_+_23063107 M18645 X53070 BC073786 X57805 X57813 AF026926 L35916 L35917 L35918 L35920 U43769 X64165 X64166 X54442	27688	+	BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25##NM_199127|GGTLC2|91227|gamma-glutamyltransferase light chain 2##X98922|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC069534|GGTLC2|91227|gamma-glutamyltransferase light chain 2##DQ896079|IGL@|3535|immunoglobulin lambda locus##BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3##L35918|IGLJ3|28831|immunoglobulin lambda joining 3	0.999195	CTCF.p2:0:0.999
chr5	71907079	71907201	reg1005201.p1	11.866	+	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	-103957	-	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-290918	+	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	-290938	+	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	205350	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	236801	+	TSC_hg19_v1_chr5_+_72143999 U72395 U72069	236867	+	BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2##NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1##U72395|TNPO1|3842|transportin 1##U72069|TNPO1|3842|transportin 1	0.062234	
chrY	1523212	1523329	reg1006122.p1	11.866	+	AK301844 NM_001173473	-619	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-1469	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-62301	-	BC043610 GQ280263 NM_178129 AK126147	82768	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	137259	+	NM_004043 U11090	141077	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.088506	
chr11	118530289	118530436	reg1007725.p1	11.865	+	NM_001144758 NM_001144759 TSC_hg19_v1_chr11_+_118478332 CR749783 BC098586 AB014538 AK295819 AL832373 AK074070 AK125783	-51985	+	AB094090 NM_015157	-53150	+	TSC_hg19_v1_chr11_+_118443146 X81197 BC080638 BC093636 BC093638	-87204	+	AK223140 AK309565 AK091981 AK223143 AX747289 BC109206 NM_007180 AB000824	20005	-	BC065007 TSC_hg19_v1_chr11_-_118661679 AK313244	131271	-	TSC_hg19_v1_chr11_-_118661835 D17532	131474	-	NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AB094090|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##NM_015157|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##X81197|ARCN1|372|archain 1##BC080638|ARCN1|372|archain 1##BC093636|ARCN1|372|archain 1##BC093638|ARCN1|372|archain 1##AK223140|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK309565|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK091981|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK223143|TREH|11181|trehalase (brush-border membrane glycoprotein)##BC109206|TREH|11181|trehalase (brush-border membrane glycoprotein)##NM_007180|TREH|11181|trehalase (brush-border membrane glycoprotein)##AB000824|TREH|11181|trehalase (brush-border membrane glycoprotein)##BC065007|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK313244|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##D17532|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	0.908109	CTCF.p2:-42:0.706
chr21	45899643	45899745	reg1006363.p2	11.865	+	BC064321 AK127604 NM_030891 TSC_hg19_v1_chr21_+_45875413 AY358120	-24292	+	NM_003307 TSC_hg19_v1_chr21_+_45773503 AJ878416 AJ417076 BC112342 AY603182	-126161	+	TSC_hg19_v1_chr21_+_45770074 AB166745	-129684	+	TSC_hg19_v1_chr21_+_45905450 AK057525	5756	+	BC016690 BC064517 TSC_hg19_v1_chr21_+_45937524 BC101650 BC101654	37846	+	BC120959 BC120960 AB076347 NM_198691	60380	-	BC064321|LRRC3|81543|leucine rich repeat containing 3##AK127604|LRRC3|81543|leucine rich repeat containing 3##NM_030891|LRRC3|81543|leucine rich repeat containing 3##AY358120|LRRC3|81543|leucine rich repeat containing 3##NM_003307|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##AJ878416|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##AJ417076|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##BC112342|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##AY603182|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##AB166745|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##BC016690|C21orf90|114043|chromosome 21 open reading frame 90##BC064517|C21orf90|114043|chromosome 21 open reading frame 90##BC101650|C21orf90|114043|chromosome 21 open reading frame 90##BC101654|C21orf90|114043|chromosome 21 open reading frame 90##BC120959|KRTAP10-1|386677|keratin associated protein 10-1##BC120960|KRTAP10-1|386677|keratin associated protein 10-1##AB076347|KRTAP10-1|386677|keratin associated protein 10-1##NM_198691|KRTAP10-1|386677|keratin associated protein 10-1	0.830069	CTCF.p2:4:0.830
chrX	114966450	114966612	reg1006893.p1	11.865	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-138663	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-169489	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-170925	+	BC003645 TSC_hg19_v1_chrX_-_115085443	118908	-	AK313927 NM_000686 X87723 U16957	335464	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	601236	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:21:0.429
chr15	41184147	41184283	reg1009375.p1	11.864	+	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	-17768	-	TSC_hg19_v1_chr15_+_41136676 NM_001032367 AK303899 BC004140 BT007425 CU676280 DQ890747 DQ892293 DQ895493	-47514	+	TSC_hg19_v1_chr15_+_41136245 AK314825 AK300195 NM_003710 NM_181642 BC018702 AY358969 AB000095 AY296715	-47865	+	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	2485	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	37483	+	NM_001142776 NM_024111 TSC_hg19_v1_chr15_+_41245671 BC019625 BC001683 BC001847 AY702027	61489	+	AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)##NM_001142776|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##NM_024111|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC019625|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001683|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001847|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AY702027|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)	0.064489	
chr7	100813173	100813305	reg1009050.p1	11.864	+	BC063835 BC044212 TSC_hg19_v1_chr7_-_100808851 AK225839 NM_003378 BC036537	-4387	-	NM_001283 TSC_hg19_v1_chr7_+_100797756 AK312151 BC003561 AB015319	-15511	+	NM_000602 NM_001165413 TSC_hg19_v1_chr7_+_100770384 AK293248 AK297728 AK298048 AK316225 BC020765 X04729 BC010860 X04429 X12701 BC005927 M16006	-42825	+	BC037583 BC104841 AK096556 NM_198571	10286	-	BC100953 BC100954 BC100955 AY358200 AY229854 NM_178176	31007	-	TSC_hg19_v1_chr7_-_100858312 BC018946	45129	-	BC063835|VGF|7425|VGF nerve growth factor inducible##BC044212|VGF|7425|VGF nerve growth factor inducible##AK225839|VGF|7425|VGF nerve growth factor inducible##NM_003378|VGF|7425|VGF nerve growth factor inducible##BC036537|VGF|7425|VGF nerve growth factor inducible##NM_001283|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AK312151|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC003561|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AB015319|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##NM_000602|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001165413|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK293248|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK297728|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK298048|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK316225|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC020765|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04729|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC010860|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04429|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X12701|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC005927|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##M16006|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC037583|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##BC104841|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##AK096556|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##NM_198571|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##BC100953|MOGAT3|346606|monoacylglycerol O-acyltransferase 3##BC100954|MOGAT3|346606|monoacylglycerol O-acyltransferase 3##BC100955|MOGAT3|346606|monoacylglycerol O-acyltransferase 3##AY358200|MOGAT3|346606|monoacylglycerol O-acyltransferase 3##AY229854|MOGAT3|346606|monoacylglycerol O-acyltransferase 3##NM_178176|MOGAT3|346606|monoacylglycerol O-acyltransferase 3##BC018946|PLOD3|8985|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	0.021359	
chr1	156036222	156036359	reg1008930.p1	11.863	+	AF274025 BC009831 NM_020387 BC033322 AF083124	-5317	+	NM_001145264 NM_014017 TSC_hg19_v1_chr1_+_156024639 AK307086 AF070659 BC024190 CU692872 DQ892965 DQ896212	-11693	+	AB209566 AB587408 TSC_hg19_v1_chr1_-_156023537 AK098368 AK314413 BC018403 AK302895 BC063841 NM_020131 AK023354	-12775	-	AY950677 NM_001093725 TSC_hg19_v1_chr1_-_156051805	15508	-	TSC_hg19_v1_chr1_+_156052358 AK056143	16083	+	TSC_hg19_v1_chr1_+_156084501 NM_005572 NM_170707 NM_170708 X03444 X03445 AK026584 AK122732 AY357727 BC014507 BC033088 BC000511	48203	+	AF274025|RAB25|57111|RAB25, member RAS oncogene family##BC009831|RAB25|57111|RAB25, member RAS oncogene family##NM_020387|RAB25|57111|RAB25, member RAS oncogene family##BC033322|RAB25|57111|RAB25, member RAS oncogene family##AF083124|RAB25|57111|RAB25, member RAS oncogene family##NM_001145264|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##NM_014017|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##AK307086|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##AF070659|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##BC024190|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##DQ892965|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##DQ896212|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##AB209566|UBQLN4|56893|ubiquilin 4##AK098368|UBQLN4|56893|ubiquilin 4##AK314413|UBQLN4|56893|ubiquilin 4##BC018403|UBQLN4|56893|ubiquilin 4##AK302895|UBQLN4|56893|ubiquilin 4##BC063841|UBQLN4|56893|ubiquilin 4##NM_020131|UBQLN4|56893|ubiquilin 4##AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)##NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)##AK056143|LMNA|4000|lamin A/C##NM_005572|LMNA|4000|lamin A/C##NM_170707|LMNA|4000|lamin A/C##NM_170708|LMNA|4000|lamin A/C##X03444|LMNA|4000|lamin A/C##X03445|LMNA|4000|lamin A/C##AK026584|LMNA|4000|lamin A/C##AK122732|LMNA|4000|lamin A/C##AY357727|LMNA|4000|lamin A/C##BC014507|LMNA|4000|lamin A/C##BC033088|LMNA|4000|lamin A/C##BC000511|LMNA|4000|lamin A/C	0.0	
chr1	197584419	197584560	reg1009516.p1	11.862	+	AK000061 TSC_hg19_v1_chr1_-_197552357	-32157	-	NM_001193640 NM_201253 AK299368 AK289733 AK307844 AB208923 AF154671 AY043324 AY043325 BC136271 BC143726 AJ748821	-347052	+	BC132818 BC136600 AK128549 AY163816 NM_194314	-414836	-	TSC_hg19_v1_chr1_-_197744376 BC022561	159845	-	TSC_hg19_v1_chr1_-_197744396 BC063456	159907	-	TSC_hg19_v1_chr1_-_197744438 AK091207 AX746849 BC063877	159976	-	AK000061|DENND1B|163486|DENN/MADD domain containing 1B##NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)##NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)##AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)##AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)##AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)##AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)##AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)##BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)##BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)##AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)##BC132818|ZBTB41|360023|zinc finger and BTB domain containing 41##BC136600|ZBTB41|360023|zinc finger and BTB domain containing 41##AK128549|ZBTB41|360023|zinc finger and BTB domain containing 41##AY163816|ZBTB41|360023|zinc finger and BTB domain containing 41##NM_194314|ZBTB41|360023|zinc finger and BTB domain containing 41##BC022561|DENND1B|163486|DENN/MADD domain containing 1B##BC063456|DENND1B|163486|DENN/MADD domain containing 1B##AK091207|DENND1B|163486|DENN/MADD domain containing 1B##BC063877|DENND1B|163486|DENN/MADD domain containing 1B	0.916887	CTCF.p2:-3:0.917
chr4	126234732	126234871	reg1008382.p1	11.861	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	-600987	-	AK026960 BC063856 NM_005841	-1914128	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-1916845	+	NM_024582	2765	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	2319338	+	TSC_hg19_v1_chr4_+_128651573 NM_031291 AL136857 AY550240 BC022032 AB528294 AM393262 CU692468 AJ863129	2416808	+	AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##NM_031291|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AL136857|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AY550240|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC022032|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AM393262|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AJ863129|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31	0.991415	CTCF.p2:-26:0.991
chr8	117800762	117800890	reg1006784.p1	11.861	+	TSC_hg19_v1_chr8_+_117778793 AK055279 AK315770	-22032	+	BC005955 BC022441 NM_032334 TSC_hg19_v1_chr8_+_117778752	-22075	+	AK222520 TSC_hg19_v1_chr8_-_117768063 AK296162 NM_003756	-32755	-	AK289505 BC050381 TSC_hg19_v1_chr8_-_117887011 D38551	86121	-	TSC_hg19_v1_chr8_-_117887068 NM_006265	86256	-	BC140924 BC142621 NM_001025357 AB463771 AB181519	149633	+	AK055279|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##AK315770|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC005955|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC022441|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##NM_032334|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##AK222520|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK296162|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##NM_003756|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK289505|RAD21|5885|RAD21 homolog (S. pombe)##BC050381|RAD21|5885|RAD21 homolog (S. pombe)##D38551|RAD21|5885|RAD21 homolog (S. pombe)##NM_006265|RAD21|5885|RAD21 homolog (S. pombe)##BC140924|C8orf85|441376|chromosome 8 open reading frame 85##BC142621|C8orf85|441376|chromosome 8 open reading frame 85##NM_001025357|C8orf85|441376|chromosome 8 open reading frame 85##AB181519|C8orf85|441376|chromosome 8 open reading frame 85	0.183888	
chr9	36407161	36407330	reg1007296.p1	11.860	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-6070	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-6348	-	AL136817 BC033786 NM_022781 NM_194329	-6992	-	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	165679	+	TSC_hg19_v1_chr9_-_37034361 NM_016734	627171	-	TSC_hg19_v1_chr9_+_37079908 AK091718	672661	+	NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##AL136817|RNF38|152006|ring finger protein 38##BC033786|RNF38|152006|ring finger protein 38##NM_022781|RNF38|152006|ring finger protein 38##NM_194329|RNF38|152006|ring finger protein 38##AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.997496	CTCF.p2:-22:0.997
chr1	49038463	49038563	reg1006133.p1	11.859	+	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	-100668	-	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	-100835	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	-350121	+	BC011804 AK021650 CU675869 NM_024603 BC007932	203984	-	TSC_hg19_v1_chr1_-_50489560 BC035739 AK094826 AK294394	1451034	-	TSC_hg19_v1_chr1_-_50489627 AK294633 AK296221 NM_032785	1451134	-	AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC011804|BEND5|79656|BEN domain containing 5##AK021650|BEND5|79656|BEN domain containing 5##NM_024603|BEND5|79656|BEN domain containing 5##BC007932|BEND5|79656|BEN domain containing 5##BC035739|AGBL4|84871|ATP/GTP binding protein-like 4##AK094826|AGBL4|84871|ATP/GTP binding protein-like 4##AK294394|AGBL4|84871|ATP/GTP binding protein-like 4##AK294633|AGBL4|84871|ATP/GTP binding protein-like 4##AK296221|AGBL4|84871|ATP/GTP binding protein-like 4##NM_032785|AGBL4|84871|ATP/GTP binding protein-like 4	0.896813	CTCF.p2:-2:0.897
chr21	39084600	39084693	reg1004528.p1	11.859	+	NM_130438 NM_001396 U52373 D85759 U58496	-292026	+	D86550 NM_130436	-293440	+	AF108830 NM_101395 AB015283 AB015284	-344776	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	204065	-	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	408755	-	BC013327 NM_002243	544017	+	NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.54599	CTCF.p2:2:0.546
chr4	13655825	13655957	reg1006766.p1	11.859	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-26574	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-106477	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-109816	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	1347818	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	1348104	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	1348406	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	1.003926	CTCF.p2:2:0.903
chr18	66403108	66403221	reg1007191.p2	11.858	+	NM_001093729 AK308114 AK091108	-20645	+	TSC_hg19_v1_chr18_-_66382346 AK122715 BC107422 NM_019022 BX647846 AK310389	-20728	-	AM393206 AM393295 CU689334 TSC_hg19_v1_chr18_-_66382307 AK307269 AK295551 BC032325 AL832341 AL832356 BC093792 BC093794 BC143400 AB058733	-20898	-	NM_024781 CR749520	62178	+	TSC_hg19_v1_chr18_+_67068214 NM_152721 AY599248 BC096744	665066	+	AK313199 TSC_hg19_v1_chr18_-_67615110	1211935	-	NM_001093729|CCDC102B|79839|coiled-coil domain containing 102B##AK308114|CCDC102B|79839|coiled-coil domain containing 102B##AK091108|CCDC102B|79839|coiled-coil domain containing 102B##AK122715|TMX3|54495|thioredoxin-related transmembrane protein 3##BC107422|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_019022|TMX3|54495|thioredoxin-related transmembrane protein 3##BX647846|TMX3|54495|thioredoxin-related transmembrane protein 3##AK310389|TMX3|54495|thioredoxin-related transmembrane protein 3##AM393206|TMX3|54495|thioredoxin-related transmembrane protein 3##AM393295|TMX3|54495|thioredoxin-related transmembrane protein 3##AK307269|TMX3|54495|thioredoxin-related transmembrane protein 3##AK295551|TMX3|54495|thioredoxin-related transmembrane protein 3##BC032325|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832341|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832356|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093792|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093794|TMX3|54495|thioredoxin-related transmembrane protein 3##BC143400|TMX3|54495|thioredoxin-related transmembrane protein 3##AB058733|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_024781|CCDC102B|79839|coiled-coil domain containing 102B##CR749520|CCDC102B|79839|coiled-coil domain containing 102B##NM_152721|DOK6|220164|docking protein 6##AY599248|DOK6|220164|docking protein 6##BC096744|DOK6|220164|docking protein 6##AK313199|CD226|10666|CD226 molecule	0.0	
chr2	118960419	118960530	reg1006846.p1	11.858	+	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-114411	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-188741	-	TSC_hg19_v1_chr2_-_118771677 BC028609	-188790	-	NM_001426	645284	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	739346	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	955930	-	AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC028609|CCDC93|54520|coiled-coil domain containing 93##NM_001426|EN1|2019|engrailed homeobox 1##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2	0.976788	CTCF.p2:8:0.977
chr9	28774564	28774697	reg1007108.p1	11.857	+	AK056372 NM_152570	-55328	-	AK057806 JN681271 NM_145005	-1200789	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-1201159	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	3609960	+	TSC_hg19_v1_chr9_+_32384622 AK057904	3609997	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	3610019	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.262838	CTCF.p2:-1:0.263
chr2	197318416	197318557	reg1008684.p1	11.856	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-282168	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-282207	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-384991	-	BC117194 BC117198 AB037722 NM_020760	138806	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	185871	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	345927	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.0	
chr20	50928809	50928926	reg1006586.p1	11.855	+	BC012759 BC041622 NM_018197 NM_022088 NM_199426 NM_199427	-120344	-	BT009760 AB527686 BC021087 AK001744 TSC_hg19_v1_chr20_-_50808313 AK090547 BC031524 AK001596 AK222712	-120612	-	AY170621 AY170622 AY172738 BC111714 AK001666 NM_020436	-509871	-	BX640770 NM_173485	660078	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	660911	+	AK302570 NM_001193421	872954	+	BC012759|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC041622|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_018197|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_022088|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199426|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199427|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BT009760|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC021087|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001744|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK090547|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC031524|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001596|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK222712|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AY170621|SALL4|57167|sal-like 4 (Drosophila)##AY170622|SALL4|57167|sal-like 4 (Drosophila)##AY172738|SALL4|57167|sal-like 4 (Drosophila)##BC111714|SALL4|57167|sal-like 4 (Drosophila)##AK001666|SALL4|57167|sal-like 4 (Drosophila)##NM_020436|SALL4|57167|sal-like 4 (Drosophila)##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2##AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2	0.897238	CTCF.p2:5:0.897
chr22	33193098	33193210	reg1006673.p1	11.855	+	NM_001033024 TSC_hg19_v1_chr22_+_32871279 AK297841 AK301716	-321874	+	TSC_hg19_v1_chr22_+_32870997 BX648151 BX648220	-322153	+	TSC_hg19_v1_chr22_+_32870950 AK291972 AF233225 AB385082 AM392740 CU013088 CU013376 EU176789 EU176790	-322194	+	NM_000362	3647	+	TSC_hg19_v1_chr22_+_33197690 AK311702 AK314871 AK298126 BC013086 U14394 AX801509 U02571 S78453 U67195	4540	+	BC014277 TSC_hg19_v1_chr22_+_33197759	4598	+	NM_001033024|FBXO7|25793|F-box protein 7##AK297841|FBXO7|25793|F-box protein 7##AK301716|FBXO7|25793|F-box protein 7##BX648151|FBXO7|25793|F-box protein 7##BX648220|FBXO7|25793|F-box protein 7##AK291972|FBXO7|25793|F-box protein 7##AF233225|FBXO7|25793|F-box protein 7##AM392740|FBXO7|25793|F-box protein 7##CU013088|FBXO7|25793|F-box protein 7##CU013376|FBXO7|25793|F-box protein 7##EU176789|FBXO7|25793|F-box protein 7##EU176790|FBXO7|25793|F-box protein 7##NM_000362|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK314871|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK298126|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC013086|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U14394|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U02571|TIMP3|7078|TIMP metallopeptidase inhibitor 3##S78453|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U67195|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3	0.0	
chr22	37440215	37440308	reg1005946.p1	11.855	+	TSC_hg19_v1_chr22_+_37415797 BC016737 AB208824	-24423	+	NM_001013436 NM_001130517 NM_021126 TSC_hg19_v1_chr22_+_37415789	-24516	+	D87292 TSC_hg19_v1_chr22_-_37415489 AK091874 BC010148 AK000862 AK223521 AK301300 NM_003312	-24780	-	TSC_hg19_v1_chr22_+_37447781 NM_024681 BC025403 BC031038 BC009961 AK022304	7518	+	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	59314	-	CR456446 TSC_hg19_v1_chr22_-_37505748	65417	-	BC016737|MPST|4357|mercaptopyruvate sulfurtransferase##AB208824|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001013436|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001130517|MPST|4357|mercaptopyruvate sulfurtransferase##NM_021126|MPST|4357|mercaptopyruvate sulfurtransferase##D87292|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK091874|TST|7263|thiosulfate sulfurtransferase (rhodanese)##BC010148|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK000862|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK223521|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK301300|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_003312|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_024681|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC025403|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC031038|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC009961|KCTD17|79734|potassium channel tetramerisation domain containing 17##AK022304|KCTD17|79734|potassium channel tetramerisation domain containing 17##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##CR456446|TMPRSS6|164656|transmembrane protease, serine 6	0.960594	CTCF.p2:-1:0.961
chr3	140730482	140730594	reg1007193.p1	11.855	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	-69771	+	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	-333579	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-1076286	+	TSC_hg19_v1_chr3_+_140770412 BC051354	39940	+	AF403029 BC008324 NM_080862 AK056367	40219	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	220148	+	NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2	0.329779	CTCF.p2:-4:0.330
chr14	104376771	104376901	reg1009177.p1	11.854	+	BC136527 AJ318887 TSC_hg19_v1_chr14_-_104313913 BC035446 NM_015316	-62984	-	TSC_hg19_v1_chr14_+_104182144 NM_001198953 NM_024071 BC005999 AK057816 BC001130 AY395756 AK290519 BX248261	-194720	+	TSC_hg19_v1_chr14_-_104181759 AK022829 BC011725 BX161398 BC001036 AK023646 NM_001100118 NM_001100119 NM_005432	-195053	-	BX161388 TSC_hg19_v1_chr14_-_104387847 BC047289 BC063419 BC000429 BC001944	11009	-	AK310120 TSC_hg19_v1_chr14_-_104387867 AK309355 AK312099 AF054175 AK309499 DQ426862 NM_001127393 NM_004894	11043	-	TSC_hg19_v1_chr14_+_104394792 NM_153046	17947	+	BC136527|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##AJ318887|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##BC035446|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##NM_015316|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##NM_001198953|ZFYVE21|79038|zinc finger, FYVE domain containing 21##NM_024071|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BC005999|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK057816|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BC001130|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AY395756|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK290519|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BX248261|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK022829|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC011725|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BX161398|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC001036|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK023646|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100118|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100119|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_005432|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BX161388|C14orf2|9556|chromosome 14 open reading frame 2##BC047289|C14orf2|9556|chromosome 14 open reading frame 2##BC063419|C14orf2|9556|chromosome 14 open reading frame 2##BC000429|C14orf2|9556|chromosome 14 open reading frame 2##BC001944|C14orf2|9556|chromosome 14 open reading frame 2##AK310120|C14orf2|9556|chromosome 14 open reading frame 2##AK309355|C14orf2|9556|chromosome 14 open reading frame 2##AK312099|C14orf2|9556|chromosome 14 open reading frame 2##AF054175|C14orf2|9556|chromosome 14 open reading frame 2##AK309499|C14orf2|9556|chromosome 14 open reading frame 2##DQ426862|C14orf2|9556|chromosome 14 open reading frame 2##NM_001127393|C14orf2|9556|chromosome 14 open reading frame 2##NM_004894|C14orf2|9556|chromosome 14 open reading frame 2##NM_153046|TDRD9|122402|tudor domain containing 9	0.891907	CTCF.p2:20:0.892
chr16	87312339	87312456	reg1006451.p1	11.853	+	BC100027 NM_005250	-700283	+	BC113437 BC113439 NM_005251	-711541	+	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	-723625	-	TSC_hg19_v1_chr16_-_87350760 AB528835 AM392822 AM393070	38403	-	TSC_hg19_v1_chr16_-_87350999 BC015536 AK026130 NM_001195124 NM_001195125	38589	-	TSC_hg19_v1_chr16_-_87417364 AY736035 AF428140 BC012748 BC002985 NM_024735	104965	-	BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AM392822|C16orf95|100506581|chromosome 16 open reading frame 95##AM393070|C16orf95|100506581|chromosome 16 open reading frame 95##BC015536|C16orf95|100506581|chromosome 16 open reading frame 95##AK026130|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195124|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195125|C16orf95|100506581|chromosome 16 open reading frame 95##AY736035|FBXO31|79791|F-box protein 31##AF428140|FBXO31|79791|F-box protein 31##BC012748|FBXO31|79791|F-box protein 31##BC002985|FBXO31|79791|F-box protein 31##NM_024735|FBXO31|79791|F-box protein 31	0.911931	CTCF.p2:10:0.912
chr21	32552990	32553108	reg1007716.p1	11.853	+	AB096964 NM_001099219	-142255	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	-299191	-	AJ457063 AB096962 NM_181606	-351061	-	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	378309	-	TSC_hg19_v1_chr21_+_33032005 NM_000454 AK312116 BC001034 X02317 EF151142 AB464254 AY049787 AY450286 BT006676 CR450355 CR541742 CU674512 EF143990	478958	+	AB032998 AK025748 AL117417 TSC_hg19_v1_chr21_-_33074136	521069	-	AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##NM_000454|SOD1|6647|superoxide dismutase 1, soluble##AK312116|SOD1|6647|superoxide dismutase 1, soluble##BC001034|SOD1|6647|superoxide dismutase 1, soluble##X02317|SOD1|6647|superoxide dismutase 1, soluble##EF151142|SOD1|6647|superoxide dismutase 1, soluble##AY049787|SOD1|6647|superoxide dismutase 1, soluble##AY450286|SOD1|6647|superoxide dismutase 1, soluble##BT006676|SOD1|6647|superoxide dismutase 1, soluble##CR450355|SOD1|6647|superoxide dismutase 1, soluble##CR541742|SOD1|6647|superoxide dismutase 1, soluble##EF143990|SOD1|6647|superoxide dismutase 1, soluble##AB032998|SCAF4|57466|SR-related CTD-associated factor 4##AK025748|SCAF4|57466|SR-related CTD-associated factor 4##AL117417|SCAF4|57466|SR-related CTD-associated factor 4	0.997835	CTCF.p2:1:0.998
chr9	138981637	138981764	reg1009191.p1	11.853	+	TSC_hg19_v1_chr9_-_138853220 AF176796 BC004967 NM_016172	-128497	-	CU678830 DQ892567 DQ895782 TSC_hg19_v1_chr9_-_138853062 BC011822	-128661	-	TSC_hg19_v1_chr9_-_138799245 NM_015447	-182539	-	TSC_hg19_v1_chr9_-_138987136 BC015649 AK129748 NM_144653	5435	-	BC092490 BC111053 TSC_hg19_v1_chr9_-_139010485	28735	-	BC014304 BC013282 TSC_hg19_v1_chr9_-_139010700 AK023162 AK091349 AX746927 BC021231	28970	-	AF176796|UBAC1|10422|UBA domain containing 1##BC004967|UBAC1|10422|UBA domain containing 1##NM_016172|UBAC1|10422|UBA domain containing 1##DQ892567|UBAC1|10422|UBA domain containing 1##DQ895782|UBAC1|10422|UBA domain containing 1##BC011822|UBAC1|10422|UBA domain containing 1##NM_015447|CAMSAP1|157922|calmodulin regulated spectrin-associated protein 1##BC015649|NACC2|138151|NACC family member 2, BEN and BTB (POZ) domain containing##NM_144653|NACC2|138151|NACC family member 2, BEN and BTB (POZ) domain containing##BC092490|C9orf69|90120|chromosome 9 open reading frame 69##BC111053|C9orf69|90120|chromosome 9 open reading frame 69##BC014304|C9orf69|90120|chromosome 9 open reading frame 69##BC013282|C9orf69|90120|chromosome 9 open reading frame 69##AK023162|C9orf69|90120|chromosome 9 open reading frame 69##AK091349|C9orf69|90120|chromosome 9 open reading frame 69##BC021231|C9orf69|90120|chromosome 9 open reading frame 69	0.323282	CTCF.p2:-25:0.323
chr15	79272179	79272323	reg1006542.p4	11.852	+	TSC_hg19_v1_chr15_-_79237389 AL110099 BC002479 BC018821 AK309491 AK314698 D28436 AK130158 NM_004390	-34852	-	TSC_hg19_v1_chr15_-_79237350 AF426247 AF426248 CR456881 CU677980 DQ890683 DQ893772 AK295583 X16832	-34916	-	TSC_hg19_v1_chr15_+_79165343 AK300789 BC067826 AB385578 CU692730 DQ892602 DQ895837 AK310181	-106888	+	NM_153815 S62035	25750	-	L26584 CU691844 AB385192 TSC_hg19_v1_chr15_-_79382954	110648	-	AK290135 TSC_hg19_v1_chr15_-_79383114 BC040275 NM_001145648 NM_002891	110897	-	AL110099|CTSH|1512|cathepsin H##BC002479|CTSH|1512|cathepsin H##BC018821|CTSH|1512|cathepsin H##AK309491|CTSH|1512|cathepsin H##AK314698|CTSH|1512|cathepsin H##D28436|CTSH|1512|cathepsin H##AK130158|CTSH|1512|cathepsin H##NM_004390|CTSH|1512|cathepsin H##AF426247|CTSH|1512|cathepsin H##AF426248|CTSH|1512|cathepsin H##CR456881|CTSH|1512|cathepsin H##DQ890683|CTSH|1512|cathepsin H##DQ893772|CTSH|1512|cathepsin H##X16832|CTSH|1512|cathepsin H##AK300789|MORF4L1|10933|mortality factor 4 like 1##BC067826|MORF4L1|10933|mortality factor 4 like 1##DQ892602|MORF4L1|10933|mortality factor 4 like 1##DQ895837|MORF4L1|10933|mortality factor 4 like 1##AK310181|MORF4L1|10933|mortality factor 4 like 1##NM_153815|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##S62035|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##L26584|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK290135|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##BC040275|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_001145648|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_002891|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1	0.995366	CTCF.p2:-9:0.995
chr12	12761743	12761862	reg1006440.p2	11.851	+	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	-46402	-	TSC_hg19_v1_chr12_+_12510051 NM_058169 AK075028 BC013668 AY037865 AY037866 DQ891778 DQ894962 CU680646	-251637	+	AY358563 TSC_hg19_v1_chr12_-_12503210 AK023622 NM_018050 AK001160 BC032998	-258630	-	TSC_hg19_v1_chr12_+_12764831 BC106052 AF039081 NM_001310 AK307202	2993	+	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	3081	+	AK096388 NM_006143	87318	-	AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16##NM_058169|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AK075028|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##BC013668|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037865|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037866|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ891778|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ894962|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY358563|MANSC1|54682|MANSC domain containing 1##AK023622|MANSC1|54682|MANSC domain containing 1##NM_018050|MANSC1|54682|MANSC domain containing 1##AK001160|MANSC1|54682|MANSC domain containing 1##BC032998|MANSC1|54682|MANSC domain containing 1##BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2##AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2##AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2##BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2##AK096388|GPR19|2842|G protein-coupled receptor 19##NM_006143|GPR19|2842|G protein-coupled receptor 19	0.0	
chrUn_gl000227	74806	74986	reg1005643.p2	11.850	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	2.741217	CTCF.p2:-27:0.415	CTCF.p2:33:0.964	CTCF.p2:66:0.287	CTCF.p2:-87:0.443	CTCF.p2:94:0.632
chr9	5442533	5442673	reg1008912.p1	11.849	+	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	-4723	-	X00949 DQ893302 DQ896468 BC005956 NM_006911	-102795	-	HQ258745 NM_005059 NM_134441 X00948 BC126415 BC126419	-138009	-	TSC_hg19_v1_chr9_+_5450455 NM_014143 DQ836393 AK300470 AK314567 AF233516 BC069381	7904	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	68060	+	TSC_hg19_v1_chr9_+_5629121 NM_001135920 NM_001206557 NM_020829	186524	+	BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46##X00949|RLN1|6013|relaxin 1##DQ893302|RLN1|6013|relaxin 1##DQ896468|RLN1|6013|relaxin 1##BC005956|RLN1|6013|relaxin 1##NM_006911|RLN1|6013|relaxin 1##HQ258745|RLN2|6019|relaxin 2##NM_005059|RLN2|6019|relaxin 2##NM_134441|RLN2|6019|relaxin 2##X00948|RLN2|6019|relaxin 2##BC126415|RLN2|6019|relaxin 2##BC126419|RLN2|6019|relaxin 2##NM_014143|CD274|29126|CD274 molecule##DQ836393|CD274|29126|CD274 molecule##AK300470|CD274|29126|CD274 molecule##AK314567|CD274|29126|CD274 molecule##AF233516|CD274|29126|CD274 molecule##BC069381|CD274|29126|CD274 molecule##AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_001135920|KIAA1432|57589|KIAA1432##NM_001206557|KIAA1432|57589|KIAA1432##NM_020829|KIAA1432|57589|KIAA1432	0.321241	CTCF.p2:6:0.254
chr16	57452884	57453008	reg1006612.p1	11.848	+	BC069107 NM_002987 BC112066 BC112068	-14251	+	TSC_hg19_v1_chr16_+_57406401 AK223351 AK313806 U84487 U91835 BC001163 BC016164 NM_002996 AB590256 DQ890704 DQ891871 DQ893888 DQ895059 CU674588 CR457426	-46507	+	AK222692 TSC_hg19_v1_chr16_+_57406382	-46561	+	BC036316 TSC_hg19_v1_chr16_-_57481298 AK074263 BC002568 AK292281 AL136613 BC071740 BC024196 AF248964 NM_020313 BC067303	28408	-	AK075438 NM_020312 TSC_hg19_v1_chr16_+_57481390 AK295793 BC064946 AK293585 BC029341 BC054340 AF161444 AK290627 AK303527 CU687976 EU832506 EU832587	28430	+	TSC_hg19_v1_chr16_+_57496563 NM_032940	43612	+	BC069107|CCL17|6361|chemokine (C-C motif) ligand 17##NM_002987|CCL17|6361|chemokine (C-C motif) ligand 17##BC112066|CCL17|6361|chemokine (C-C motif) ligand 17##BC112068|CCL17|6361|chemokine (C-C motif) ligand 17##AK223351|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK313806|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U84487|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U91835|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC001163|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC016164|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002996|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ890704|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ891871|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ893888|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ895059|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##CR457426|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK222692|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK075438|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_020312|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK295793|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC064946|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK293585|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC029341|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC054340|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AF161444|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK290627|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK303527|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832506|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832587|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	0.998258	CTCF.p2:1:0.998
chr2	120581448	120581567	reg1006917.p2	11.848	+	M68941 NM_002830 TSC_hg19_v1_chr2_+_120517497 AK314836 BC010674	-64107	+	TSC_hg19_v1_chr2_+_120436776 AK057313 AK308503 AK311734	-144726	+	TSC_hg19_v1_chr2_+_120436745 AK130088 NM_001105198 NM_001105199 NM_030577 AK096890 AK299078 BC004404	-144773	+	TSC_hg19_v1_chr2_+_120770604 NM_001184937 NM_001184939 NM_020909	189096	+	TSC_hg19_v1_chr2_+_120770652 AK023019 BC054508 AK290895 BC032822 NM_001184938	189226	+	TSC_hg19_v1_chr2_-_120980957 BC016849 AK289880 BC080607 AK024632	399430	-	M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK057313|LOC100125918|100125918|uncharacterized LOC100125918##AK308503|TMEM177|80775|transmembrane protein 177##AK130088|TMEM177|80775|transmembrane protein 177##NM_001105198|TMEM177|80775|transmembrane protein 177##NM_001105199|TMEM177|80775|transmembrane protein 177##NM_030577|TMEM177|80775|transmembrane protein 177##AK096890|TMEM177|80775|transmembrane protein 177##AK299078|TMEM177|80775|transmembrane protein 177##BC004404|TMEM177|80775|transmembrane protein 177##NM_001184937|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184939|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_020909|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK023019|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC054508|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK290895|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC032822|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184938|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC016849|TMEM185B|79134|transmembrane protein 185B##BC080607|TMEM185B|79134|transmembrane protein 185B##AK024632|TMEM185B|79134|transmembrane protein 185B	0.0	
chr16	5006266	5006406	reg1008721.p1	11.847	+	AF013717 BC114620 AF001691 NM_002705 TSC_hg19_v1_chr16_-_4987144	-19232	-	NM_016936 AF108461	-104191	+	BC013750 NM_001079514	-108425	+	AB007880 NM_014692	1981	+	TSC_hg19_v1_chr16_+_5083673 AK055222	77350	+	TSC_hg19_v1_chr16_-_5083927 AF187072 AK026122 BC012194	77585	-	AF013717|PPL|5493|periplakin##BC114620|PPL|5493|periplakin##AF001691|PPL|5493|periplakin##NM_002705|PPL|5493|periplakin##NM_016936|UBN1|29855|ubinuclein 1##AF108461|UBN1|29855|ubinuclein 1##BC013750|UBN1|29855|ubinuclein 1##NM_001079514|UBN1|29855|ubinuclein 1##AB007880|SEC14L5|9717|SEC14-like 5 (S. cerevisiae)##NM_014692|SEC14L5|9717|SEC14-like 5 (S. cerevisiae)##AK055222|LOC100507589|100507589|uncharacterized LOC100507589##AF187072|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK026122|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##BC012194|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	0.78885	CTCF.p2:4:0.789
chr2	235453710	235453809	reg1005892.p2	11.845	+	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	-48040	-	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-494372	+	AY090109 NM_024080 BC126342 BC143819	-627714	+	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	406899	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	949044	+	TSC_hg19_v1_chr2_+_236402950 BC140856	949218	+	NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.99841	CTCF.p2:-3:0.998
chr22	35536994	35537126	reg1006874.p1	11.845	+	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	-74911	+	AJ007583 AB011181 NM_004737 NM_133642	-1220690	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-2082705	-	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	116416	+	AK293694 NM_001135729	158207	+	TSC_hg19_v1_chr22_+_35695855 NM_001135730 NM_001135732 NM_005488 AK026576 AJ006973 AY358980	158771	+	CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)##NM_001135730|TOM1|10043|target of myb1 (chicken)##NM_001135732|TOM1|10043|target of myb1 (chicken)##NM_005488|TOM1|10043|target of myb1 (chicken)##AK026576|TOM1|10043|target of myb1 (chicken)##AJ006973|TOM1|10043|target of myb1 (chicken)##AY358980|TOM1|10043|target of myb1 (chicken)	0.0	
chr4	141782651	141782778	reg1007375.p1	11.845	+	NM_015130 TSC_hg19_v1_chr4_-_141677529	-105215	-	U28480 BC069556 BC096736 BC098168 BC098258 BC098352 NM_021833	-292794	-	TSC_hg19_v1_chr4_+_141445351 BX648843 BC015168 AK093087	-337359	+	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	271817	-	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	359341	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	359372	+	NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)##U28480|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC069556|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC096736|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098168|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098258|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098352|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##NM_021833|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BX648843|ELMOD2|255520|ELMO/CED-12 domain containing 2##BC015168|ELMOD2|255520|ELMO/CED-12 domain containing 2##AK093087|ELMOD2|255520|ELMO/CED-12 domain containing 2##AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330	0.99605	CTCF.p2:-15:0.996
chr5	138598454	138598587	reg1008385.p1	11.845	+	TSC_hg19_v1_chr5_-_138534058 AJ299442 AK074624 NM_001037633 NM_022464	-64474	-	TSC_hg19_v1_chr5_-_138533998 AY358950 BC011568	-64512	-	AF547994 TSC_hg19_v1_chr5_-_138533996 AK075177	-64531	-	AK307872 NM_001194954 NM_199189 TSC_hg19_v1_chr5_+_138609537	10968	+	TSC_hg19_v1_chr5_+_138609789 BC036498 CR749625 AK293952 AJ224166 AJ224167 AJ224168 AJ224169 AJ224170	11284	+	TSC_hg19_v1_chr5_+_138629336 NM_018834	30819	+	AJ299442|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK074624|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_001037633|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_022464|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AY358950|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##BC011568|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AF547994|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK075177|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK307872|MATR3|9782|matrin 3##NM_001194954|MATR3|9782|matrin 3##NM_199189|MATR3|9782|matrin 3##BC036498|MATR3|9782|matrin 3##CR749625|MATR3|9782|matrin 3##AK293952|MATR3|9782|matrin 3##AJ224166|MATR3|9782|matrin 3##AJ224167|SNHG4|724102|small nucleolar RNA host gene 4 (non-protein coding)##AJ224168|SNHG4|724102|small nucleolar RNA host gene 4 (non-protein coding)##AJ224169|MATR3|9782|matrin 3##AJ224170|SNHG4|724102|small nucleolar RNA host gene 4 (non-protein coding)##NM_018834|MATR3|9782|matrin 3	0.372238	CTCF.p2:-2:0.372
chr8	130548139	130548267	reg1005966.p1	11.845	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1741420	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1799713	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1799878	+	AB042405 NM_031415	250930	-	BC003599 TSC_hg19_v1_chr8_-_130951934	403712	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	403803	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.857215	CTCF.p2:6:0.857
chr10	104238818	104238927	reg1007040.p1	11.842	+	TSC_hg19_v1_chr10_+_104221184 AK301612 AY358808 NM_024789	-17690	+	TSC_hg19_v1_chr10_+_104221151 AK296583	-17722	+	BC126459 AK024342 NM_024886	-27601	-	CU674342 AM393135 DQ892689 DQ895934 AB462953 BC026016 TSC_hg19_v1_chr10_-_104262470 BC000693 Z14978 X82206 AK302072 AK312506 AK297362 AK297620 NM_005736	23585	-	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	24847	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	24947	+	AK301612|TMEM180|79847|transmembrane protein 180##AY358808|TMEM180|79847|transmembrane protein 180##NM_024789|TMEM180|79847|transmembrane protein 180##AK296583|TMEM180|79847|transmembrane protein 180##BC126459|C10orf95|79946|chromosome 10 open reading frame 95##AK024342|C10orf95|79946|chromosome 10 open reading frame 95##NM_024886|C10orf95|79946|chromosome 10 open reading frame 95##AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)	0.790872	CTCF.p2:16:0.791
chr3	25898554	25898655	reg1005442.p1	11.842	+	TSC_hg19_v1_chr3_+_25831590 NM_001145391 NM_017897 AK000611 AK304821 AK225260 BC008202	-67024	+	AK296047 NM_001145294	-67092	-	TSC_hg19_v1_chr3_-_25824955 NM_001145293 NM_001145295 NM_018297	-73634	-	BC067784 TSC_hg19_v1_chr3_+_26664296 AF396933 NM_052953	765696	+	TSC_hg19_v1_chr3_-_27410884 AK123061 NM_199347	1512309	-	AF047033 AF089726 NM_003615	1599640	-	NM_001145391|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##NM_017897|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK000611|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK304821|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK225260|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##BC008202|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK296047|NGLY1|55768|N-glycanase 1##NM_001145294|NGLY1|55768|N-glycanase 1##NM_001145293|NGLY1|55768|N-glycanase 1##NM_001145295|NGLY1|55768|N-glycanase 1##NM_018297|NGLY1|55768|N-glycanase 1##BC067784|LRRC3B|116135|leucine rich repeat containing 3B##AF396933|LRRC3B|116135|leucine rich repeat containing 3B##NM_052953|LRRC3B|116135|leucine rich repeat containing 3B##AK123061|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##NM_199347|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7	0.676795	CTCF.p2:6:0.677
chr2	86307146	86307267	reg1007541.p1	11.841	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-191120	-	AY152815 NM_001042437	-212414	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-326201	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	25777	-	NM_015425	26071	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	26135	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.940445	CTCF.p2:0:0.940
chr2	220341110	220341228	reg1005972.p1	11.840	+	NM_001173476	-15636	+	AY603755 TSC_hg19_v1_chr2_+_220309394	-31786	+	AK289531 TSC_hg19_v1_chr2_+_220306806	-34380	+	TSC_hg19_v1_chr2_+_220363622 NM_013335 AK000999 NM_205847 AK290671 AK022578 AK222951 AK296193 BC007456	22612	+	BC031812 NM_018674 NM_182847 AK308804 BC010439 DQ892104 CU679713 AK309373	37839	+	AK302124 NM_001195731	66649	-	NM_001173476|SPEG|10290|SPEG complex locus##AY603755|SPEG|10290|SPEG complex locus##AK289531|SPEG|10290|SPEG complex locus##NM_013335|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK000999|GMPPA|29926|GDP-mannose pyrophosphorylase A##NM_205847|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK290671|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK022578|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK222951|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK296193|GMPPA|29926|GDP-mannose pyrophosphorylase A##BC007456|GMPPA|29926|GDP-mannose pyrophosphorylase A##BC031812|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_018674|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_182847|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK308804|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##BC010439|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##DQ892104|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK309373|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK302124|CHPF|79586|chondroitin polymerizing factor##NM_001195731|CHPF|79586|chondroitin polymerizing factor	0.271691	
chr7	73981201	73981317	reg1006748.p1	11.840	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	-112824	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	-112951	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	-113095	+	AK292832 TSC_hg19_v1_chr7_+_74072028 AF015553 NM_001163636 NM_001518 NM_032999 NM_033000 NM_033001	90762	+	TSC_hg19_v1_chr7_+_74072046 BC070484	90785	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	90863	+	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AK292832|GTF2I|2969|general transcription factor IIi##AF015553|GTF2I|2969|general transcription factor IIi##NM_001163636|GTF2I|2969|general transcription factor IIi##NM_001518|GTF2I|2969|general transcription factor IIi##NM_032999|GTF2I|2969|general transcription factor IIi##NM_033000|GTF2I|2969|general transcription factor IIi##NM_033001|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi	0.406944	CTCF.p2:16:0.407
chr15	84228230	84228372	reg1009203.p1	11.839	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-112073	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-112241	+	L03427 NM_001717 TSC_hg19_v1_chr15_-_83953480	-274823	-	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	94526	+	NM_001243531	612940	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	915980	+	BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##L03427|BNC1|646|basonuclin 1##NM_001717|BNC1|646|basonuclin 1##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2	0.99896	CTCF.p2:10:0.999
chr1	36834744	36834863	reg1008818.p1	11.838	+	TSC_hg19_v1_chr1_-_36817157 AK023810	-17629	-	AK001509 NM_018166	-45049	-	TSC_hg19_v1_chr1_+_36772696 NM_024676 AK297015 AK056459	-62097	+	AL834137 NM_032017 BC008344 TSC_hg19_v1_chr1_-_36851499 BC007835 AY198395	16688	-	TSC_hg19_v1_chr1_-_36851517 AK075048	16720	-	AF394685 TSC_hg19_v1_chr1_-_36863508 AF166092 BC007623 NM_032881	28690	-	AK001509|FAM176B|55194|family with sequence similarity 176, member B##NM_018166|FAM176B|55194|family with sequence similarity 176, member B##NM_024676|SH3D21|79729|SH3 domain containing 21##AK297015|SH3D21|79729|SH3 domain containing 21##AK056459|SH3D21|79729|SH3 domain containing 21##AL834137|STK40|83931|serine/threonine kinase 40##NM_032017|STK40|83931|serine/threonine kinase 40##BC008344|STK40|83931|serine/threonine kinase 40##BC007835|STK40|83931|serine/threonine kinase 40##AY198395|STK40|83931|serine/threonine kinase 40##AK075048|STK40|83931|serine/threonine kinase 40##AF394685|LSM10|84967|LSM10, U7 small nuclear RNA associated##AF166092|LSM10|84967|LSM10, U7 small nuclear RNA associated##BC007623|LSM10|84967|LSM10, U7 small nuclear RNA associated##NM_032881|LSM10|84967|LSM10, U7 small nuclear RNA associated	0.986607	CTCF.p2:2:0.987
chr4	12854036	12854142	reg1006590.p1	11.838	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-1423557	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-2167688	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-2395079	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	631862	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	631886	-	AB463932 AF009801 EU446467 BC111966 NM_001189	691986	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.941632	CTCF.p2:-7:0.942
chr16	82263754	82263893	reg1009360.p1	11.837	+	CU689076 AB463897 TSC_hg19_v1_chr16_-_82203821 BC005242 BC031017 BC011020 BC029395 X98263 AK222667 AK314163 NM_005792	-60013	-	TSC_hg19_v1_chr16_+_82068989 DQ893100 DQ896372	-194830	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	-194891	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	396571	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	396766	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	396846	+	BC005242|MPHOSPH6|10200|M-phase phosphoprotein 6##BC031017|MPHOSPH6|10200|M-phase phosphoprotein 6##BC011020|MPHOSPH6|10200|M-phase phosphoprotein 6##BC029395|MPHOSPH6|10200|M-phase phosphoprotein 6##X98263|MPHOSPH6|10200|M-phase phosphoprotein 6##AK222667|MPHOSPH6|10200|M-phase phosphoprotein 6##AK314163|MPHOSPH6|10200|M-phase phosphoprotein 6##NM_005792|MPHOSPH6|10200|M-phase phosphoprotein 6##DQ893100|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##DQ896372|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)	0.998657	CTCF.p2:0:0.999
chr6	25223832	25223965	reg1008805.p1	11.837	+	TSC_hg19_v1_chr6_-_24936189 AK299047	-287715	-	AB002384 NM_014722	-312704	-	U49187 AK300138 BC001232 NM_015864	-346381	-	TSC_hg19_v1_chr6_+_25279316 BC040903	55420	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	55760	+	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	55996	+	AK299047|FAM65B|9750|family with sequence similarity 65, member B##AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A	0.941092	CTCF.p2:-14:0.941
chr11	100726318	100726453	reg1008218.p1	11.836	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	-168257	+	AB013802 AB013803 NM_175566	-1299512	+	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	-1834636	+	AK314174 AF247167 NM_032021	136379	+	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	273414	-	AK304853 TSC_hg19_v1_chr11_-_101000531 NM_000926	274118	-	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor##AK304853|PGR|5241|progesterone receptor##NM_000926|PGR|5241|progesterone receptor	0.952335	CTCF.p2:7:0.952
chr14	106466364	106466544	reg1002200.p4	11.836	+	TSC_hg19_v1_chr14_-_106453169 X17117 AK129517 AK130825 BC065733 X59702	-13284	-	U32200 U32268 U32334 U32335 U32336 U32488 U32490 U32599 U32608 U32609 U32947 U32948 U32950 U32963 U33799 U33801 AF028098 AF028106 AF028107 AF028114 AF028118 AY155550 AY155551 DQ454559 AF460797 AF460726 AF460724 AF460827 DQ454629 DQ454614 DQ454962 GQ232822 DQ454705 DQ523871 DQ454580 DQ523917 DQ523919 AY003767 DQ454466 DQ454560 DQ454565 DQ454682 EU099268 GU552685 AY003808 AY003836 DQ454469 DQ454795 DQ454971 DQ454985 DQ454452 DQ454571 DQ454944 DQ454960 DQ523896 EF583670 DQ454558 DQ454677 DQ454859 DQ454868 DQ455000 DQ523852 DQ523901 DQ454442 DQ523848 HQ704012 DQ100720 DQ454840 DQ454949 FJ840328 FJ873931 HM116191 GQ232887 AJ487491 AJ487492 AJ487493 AJ487498 AJ487506 AY003837 JF810257 AF069907 EF091912 EF175411 EF175427 EF583661 EU350413 EU433868 EU433869 EU433881 EU667601 EU667602 FJ694875 GQ232782 GQ232813 GQ232814 GQ232841 GQ232875 GQ232936 GQ232966 GQ232996 JF810256 GQ232768 EF441747 EF583659 AF103205 AF103114 EF566909 U86787 AF484410 HQ392886 JF894284 AM279467 AM279468 AM279469 AM279470 AM279471 AM279552 AM279555 AM279588 AM279641 AF308558 EU099276 GQ232957 AF408722 HM774202 EU099163 HM774025 HM774888 HM775065 JN110525 JN110528 JN111117 L04330 L04332 L04340 FJ385388 FJ385429 GQ504861 HM774080 HM774150 HM774407 HM774529 HM774561 HM774885 HQ704005 HQ704037 S73138 AF103263 AF082193 AJ008249 AY099261 AY206987 AY998750 DQ097896 EU099144 EU099173 EU099285 AF402947 X94432 AM183993 AY393351 EU099152 EU099269 EU099281 AF306372 AJ236544 AJ271548 AY193806 AY376076 AY376077 AY376090 AY393002 AY393003 AY393011 AY393020 AY393107 AY393113 AY393114 AY393116 AY393122 AY393139 AY393140 AY393227 AY393228 AY393241 AY393250 AY393254 AY393257 AY393259 AY393354 AY393357 AY393363 AY393377 AY393497 AY393500 AY393506 AY393509 AY393511 AY393533 AY393613 AY393616 AY393617 AY393633 AY393637 AY393653 AY393671 AY393676 EU099082 EU099119 EU099146 JF894280 HM995126 JN159306 HM995172 HM995197 HM995672 AY941929 DQ100708 DQ100722 DQ523939 DQ523940 DQ524004 DQ524046 DQ524048 DQ524070 DQ524135 HM994894 HM995065 HM995066 HM995070 HM995071 HM995072 HM995073 HM995088 HM995175 HM995192 HM995193 HM995194 HM995195 HM995196 HM995198 HM995281 HM995297 HM995349 HM995351 HM995538 HM995541 HM995542 HM995586 HM995587 HM995589 HM995591 HM995593 HM995610 HM995612 HM995613 HM996403 HM996541 AY971055 DQ926099 AB063667 AB063719 AB063917 AB066970 AB066981 AB067004 AB067009 AB067029 AB067072 AB067119 AB067126 AB067131 AB067253 AB363079 AB363093 AB363142 AB363149 AB363155 AF035019 AF035020 AF209860 AJ239337 AJ308447 AY033279 AY033280 AY376105 AY866614 AY941843 AY941858 AY941885 AY941903 AY941937 AY944702 AY944720 DQ065631 DQ065643 DQ065667 DQ065682 DQ065683 DQ065690 DQ065691 DQ926090 DQ926220 DQ926223 DQ926495 DQ926527 EF178106 EU549725 EU549730 FJ385284 FJ385396 HQ378330 JF894278 JF894282 JF894286 U07988 AB063662 AB063801 AB063829 AB063919 AB066925 AB066926 AB066963 AB067152 AB067166 AB067301 AB067307 AB067308 AB067329 AB067390 AB067393 AB363083 AB363143 AB363151 AB363161 AF006523 AF021941 AF021969 AF022007 AF035786 AF062092 AF062194 AF062195 AF062197 AF115113 AF115129 AF174043 AF174084 AF174094 AF174099 AF174107 AF174114 AF174125 AF174127 AF302820 AF455545 AF455547 AJ239344 AJ239371 AJ308466 AJ389196 AJ414005 AJ414014 AJ617573 AY033238 AY055487 AY345921 AY553642 AY553645 AY577308 AY577310 AY640563 AY866611 AY941911 AY941936 AY941945 AY971057 AY971071 DQ100662 DQ100680 DQ100786 DQ100789 DQ100800 DQ100816 DQ100914 DQ100919 DQ225091 DQ926031 DQ926058 DQ926059 DQ926135 DQ926486 DQ926543 FJ385320 FJ385387 GU570212 GU570215 GU570217 GU570269 HQ689739 JF806453 JF806454 JN158766 JN158852 JN159083 JN159282 JN159291 JN159293 JN159302 JN159305 JN159446 L14456 L23558 S73506 U00499 U00505 U00539 U00554 U00562 U00568 U00586 U71104 U85231 U85241 U86522 Z18846 Z34893 Z92888 AF035803 AY686906 AY686915 AY944693 AY944713 AY944721 DQ535285 DQ535302 DQ535348 DQ535375 DQ535476 EF177970 EF178023 EF178112 EF178115 EF178119 EF178135 HM995869 HM995871 AY957509 AY957510 FJ039793 AF062143 AF062151 AF062178 AF062179 AF062226 AF062256 AF062257 AF062262 AF062267 AF062271 AF067121 AF174005 AF174006 AF174009 AF174016 AF174031 AJ009732 M29468 U43758 U43762 Z14213 Z36889 Z46348 Z47223 Z80852 L23559 M24668 AJ010445 TSC_hg19_v1_chr14_-_106453155 BC080557 M18512	-13529	-	AF064915 AF267793 DQ454464 FN563613 FN563615 FN563617 FN563618 FN563619 FN563620 FN563733 FN563734 AF460793 AY393595 DQ523938 FN563493 FN563497 FN563498 FN563499 FN563500 FN563501 FN563502 FN563503 FN563504 FN563505 FN563506 FN563508 FN563532 FN563533 FN563534 FN563535 FN563536 FN563537 FN563539 FN563541 FN563542 FN563543 FN563544 FN563545 FN563546 FN563547 FN563548 FN563549 FN563550 FN563551 FN563552 FN563553 FN563554 FN563555 FN563556 FN563557 FN563558 FN563559 FN563560 FN563561 FN563562 FN563563 FN563564 FN563565 FN563566 FN563568 FN563569 FN563570 FN563601 FN563604 FN563605 FN563606 FN563607 FN563608 FN563610 FN563638 FN563639 FN563640 FN563641 FN563642 FN563643 FN563644 FN563645 FN563646 FN563647 FN563648 FN563649 FN563650 FN563651 FN563652 FN563653 FN563654 FN563655 FN563656 FN563657 FN563658 FN563659 FN563660 FN563661 FN563674 FN563675 FN563676 FN563677 FN563678 FN563679 FN563680 FN563681 FN563682 FN563683 FN563684 FN563685 FN563686 FN563687 FN563688 FN563689 FN563690 FN563691 FN563692 FN563693 FN563694 FN563695 FN563696 FN563697 FN563698 FN563727 FN563728 FN563729 FN563730 FN563731 FN563732 FN563741 FN563742 FN563743 FN563744 FN563745 FN563746 FN563747 FN563748 FN563749 FN563750 FN563751 FN563752 DQ454919 DQ454917 DQ454897 M71234 DQ454581 DQ454690 DQ454896 DQ454978 DQ454888 DQ454959 DQ454895 AF017457 M71225 M71226 DQ523915 L04771 AJ008198 AJ008199 DQ454824 S75894 EU099248 EF407841 JF810281 L21746 AF459631 S76902 AF343422 AF343424 M99372 L21747 DQ454899 AY393584 AY393323 AY393326 AY393327 AY393332 AY393473 AY393474 AY393476 AY393477 AY393479 AY393484 AY393486 AY393487 AY393488 AY393489 AY393490 AY393492 AY393574 AY393575 AY393576 AY393577 AY393578 AY393579 AY393580 AY393581 AY393582 AY393583 AY393585 AY393586 AY393587 AY393588 AY393589 AY393590 AY393591 AY393592 AY393593 AY393594 EU099263 L21734 X65920 DQ524023 AF103096 AF035040 DQ523994 L21733 L21738 L21729 AF015136 AF015137 AF015139 AF015140 AF015141 AF015144 AF015145 AF015146 JN110879 JN110884 JN110895 JN110931 L04333 L04338 L04341 L04762 L04763 L04768 L04769 L04770 L04772 L21726 L21727 L21730 L21731 L21732 L21735 L21736 L21737 L21739 L21740 L21741 L21742 L21744 L21745 L21748 M71217 M71219 M71223 M71227 M71228 M71229 M71230 M71233 U13195 U13196 U13197 U13198 U13199 U13200 U13201 U13202 FJ385406 AF082200 AF103769 AF361061 AF361062 AF361063 AF361064 AF361065 AF361066 AF361067 AF361068 AF361069 AF361070 AF361071 AF361072 U21271 DQ524163 AF166264 L38894 U21250 U21251 U21263 U21264 U21265 AJ239381 AJ007440 DQ523936 DQ523948 DQ523949 DQ523956 DQ523961 DQ523963 DQ523978 DQ523981 DQ523982 DQ523983 DQ523996 DQ523998 DQ524010 DQ524016 DQ524025 DQ524056 DQ524063 DQ524064 DQ524066 DQ524067 DQ524069 DQ524071 DQ524073 DQ524075 DQ524076 DQ524078 DQ524081 DQ524082 DQ524083 DQ524084 DQ524085 DQ524086 DQ524091 DQ524093 DQ524094 DQ524095 DQ524097 DQ524098 DQ524101 DQ524103 DQ524105 DQ524106 DQ524107 DQ524109 DQ524112 DQ524113 DQ524116 DQ524119 DQ524121 DQ524122 DQ524123 DQ524128 DQ524129 DQ524139 DQ524145 DQ524156 DQ524157 DQ926041 HM996448 AF129749 U00535 AB063677 AB063678 AB063679 AB063680 AB063686 AB063687 AB063697 AB063724 AB063750 AB063809 AB063891 AB063907 AB063912 AB063922 AB066943 AB066951 AB066952 AB067336 AB067338 AB067339 AB067340 AB067341 AB067342 AB067343 AB067344 AB067347 AB067349 AB067351 AB067353 AB067355 AB067357 AB067358 AB067361 AB067363 AB067364 AB067365 AB067366 AB067368 AB067369 AB067370 AB067373 AB067374 AB067376 AF013615 AF021985 AF035039 AF062123 AF062213 AF062284 AF078942 AF110149 AF174044 AJ308465 AM279625 AM279626 AM279627 AY033244 AY033245 AY033248 AY033249 AY033259 AY033260 AY033261 AY033269 AY033277 AY033278 AY270187 AY270188 AY270189 AY685266 AY941880 AY941881 AY941882 AY941890 AY941918 AY941924 AY941925 AY971140 DQ005277 DQ005294 DQ100886 DQ100891 DQ100997 DQ205179 DQ212525 DQ212526 DQ535278 DQ535313 DQ535323 DQ926075 DQ926092 DQ926147 DQ926280 DQ926430 DQ926455 DQ926581 DQ926593 EF178076 FJ385286 FJ490201 HQ378327 S71250 U00548 U00558 X67879 X67880 X67881 X67882 X67883 X67884 X67885 X67886 X67887 X67888 X67889 X67890 X67891 X67892 X67893 X67894 X67895 X67896 X67897 X67898 X67900 Z15110 M18510 Z14210 Z14207 Z14209 AY392985 AY392987 AY392988 AY392989 AY392990 AY392991 AY392992 AY392993 AY392994 AY392995 AY392997 AY392998 AY393098 AY393099 AY393100 AY393101 AY393102 AY393103 AY393104 AY393205 AY393206 AY393207 AY393208 AF062114 AF062137 AF062165 AF062219 AF062254 AF062273 AY452136 AY452137 L21957 X65916 X65917 X65918 Z14158 Z14159 Z14160 Z14161 Z14162 Z14163 Z14164 Z14184 Z14185 Z14186 Z14187 Z14188 Z14208 Z14211 Z14223 Z47236 BC089412 AY510105 M34029 BX648616 TSC_hg19_v1_chr14_-_106406109	-60583	-	GQ232825 GU552779 GU552687 GU552689 AY003848 FJ873924 FJ873955 GQ232946 HM116167 EF407847 EU350414 GQ232973 HM774711 EF407839 EF441752 U86801 AF211930 AM279559 HM774196 EU099286 EU146322 L04328 L04336 L04337 L33037 AY062319 FJ385375 FJ385408 FJ385414 FJ385418 FJ385419 HM774332 HM774418 HM774599 HM774606 AF103282 EU099067 EU099203 EU099287 EU146373 EU146380 FJ385394 EU099221 EU099283 AF306375 AF306376 AM259139 AY062320 AY392849 AY393007 AY393013 AY393111 AY393223 AY393232 AY393255 AY393368 AY393531 AY393610 AY393666 DQ100814 EU099253 HM996275 AY033262 AY033283 EF177964 FJ385299 AB022655 AB067168 AB067394 AF022000 AJ239360 AJ414006 AY553644 AY553647 AY885171 DQ926345 FJ039788 HM152522 M17750 M17751 U00569 U00580 AY686877 AY944696 DQ535282 DQ535443 DQ535465 DQ535484 EF178053 EF178130 FJ195468 FJ195471 HM152519 AF062134 AF062139 AF062140 AF062142 AF062221 L01278 X65883 X65885 X65887 X65888 X65891 X65892 X65893 Z47274 Z47275 Z47276 Z47277 Z80847 BC075840 TSC_hg19_v1_chr14_-_106471733 BX640724 AK097348 AK126543 AK304469 BX640847 S42403	5203	-	U49664 U32269 U32952 AY312398 AY312399 DQ454445 DQ454564 DQ454725 DQ524089 DQ454727 DQ454701 AF460719 AF460723 AF460756 AF460759 AF460771 AF460834 AF460823 AF460829 AF069906 DQ454534 DQ454674 DQ454797 DQ454818 GQ232799 DQ454530 DQ454764 Z30560 DQ454570 DQ454557 DQ454637 GU552723 GQ232831 Z30574 DQ454608 DQ454707 DQ454862 DQ454866 DQ454867 DQ454932 DQ523879 GQ232818 Z30544 Z30556 Z30563 Z30597 Z30672 DQ454537 DQ454600 Z30594 DQ454991 Z30548 DQ454533 DQ454966 DQ523863 DQ454575 DQ454591 DQ454675 DQ454975 DQ454989 HM116173 AY003860 DQ454688 EF091927 JF810280 EU099245 AY393163 EU099075 EU099102 AY393165 EU099215 AM183979 AY393166 AY393171 AY393177 AY393179 AY393180 AY393181 AY393183 AY393184 S74500 EU620003 AF103363 AF400158 AJ240597 JN110684 S74642 Z46847 FJ385345 FJ385356 FJ385426 GQ504882 AY062307 AF103159 AB274406 AB274412 AY422526 HM995333 L38895 Z92893 AY671484 AY671502 HM996309 DQ524158 DQ524152 AF398957 DQ523937 DQ523942 DQ523974 DQ523976 DQ524014 DQ524020 DQ524029 DQ524039 DQ524045 DQ524146 HM996397 AM233760 AM233767 AM233773 DQ926107 AF453266 AY376082 EF177971 HM995388 HM995482 HM995628 HM995630 HM995662 HM995740 HM995924 HM996182 HM996322 HM996354 HM996496 HM996514 HM996515 AB066901 AB066907 AB067286 AB067291 AB084084 AB453233 AF174055 AF174064 AF174066 AF174090 AF174108 AF174113 AF262203 AF262207 AJ244952 AJ244989 AJ245004 AJ245022 AJ245025 AJ245048 AJ245053 AJ245233 AJ245239 AJ245242 AJ389195 AJ556756 AJ556762 AJ576037 AJ579119 AJ579123 AJ579127 AJ579128 AJ579137 AJ579254 AJ579295 AJ579298 AJ579299 AY640493 AY640507 AY640551 AY670735 AY670737 AY670748 AY670776 AY670778 AY670786 AY670793 AY670807 AY670829 AY670832 AY670848 AY670852 AY670854 AY670861 AY670868 AY670869 AY670876 AY670877 AY670880 AY670887 AY670888 AY670889 AY670891 AY670901 AY670906 AY670908 AY670909 AY670917 AY670922 AY670927 AY670934 AY670936 AY670937 AY670938 AY670939 AY670941 AY670945 AY670955 AY670956 AY670957 AY670964 AY670968 AY670971 AY670979 AY670996 AY671042 AY671084 AY671098 AY671112 AY671127 AY671131 AY671137 AY671138 AY671237 AY671320 AY671325 AY671331 AY671336 AY671344 AY671367 AY671381 AY671385 AY671396 AY671397 AY671404 AY671405 AY671407 AY671408 AY671417 AY671437 AY671440 AY671442 AY671448 AY671463 AY671465 AY671467 AY671469 AY671493 AY671501 AY671506 AY671509 AY671516 AY671522 AY671524 AY671526 AY671542 AY671546 AY671547 AY671550 AY671554 AY671558 AY671559 AY671569 AY671571 AY671584 AY671588 AY671590 AY671594 AY671604 AY671607 AY671608 AY671609 AY671610 AY671611 AY671613 AY671615 AY671616 AY671621 AY671622 AY671628 AY671633 AY671636 AY671643 AY671646 AY671647 AY671649 AY671655 AY671657 AY671662 AY671667 AY671669 AY671679 AY671680 AY671683 AY671687 AY671695 AY671747 AY671768 AY671777 AY671778 AY685295 AY685305 AY685312 AY781854 AY781863 AY971061 AY971111 AY971119 DQ005266 DQ005272 DQ005280 DQ100845 DQ100896 DQ205163 DQ926078 FJ039782 FJ385308 FJ385314 FJ385395 GU570393 GU570394 HM152486 L12191 L12196 L25294 S55101 S67077 U85239 Z18320 Z70635 Z70659 AY686879 DQ535276 DQ535307 DQ535328 EF177962 FJ195498 FJ195512 HM996178 X67910 AY392946 AY392947 AY392948 AY392956 AY671265 AY671019 AY671039 AY671041 AY671259 AY671249 AY671147 AY671154 AY671178 AY671210 AY671260 AY671261 AF013620 AF062200 AF062203 AF062207 AF062220 AF062245 AF062258 AF062264 AF062272 AF174013 AF174036 AF381602 AF381610 AM233776 AM233818 AY670746 AY671066 AY671181 AY671188 AY671211 AY671693 AY671738 M26997 M99609 X52110 Z11958 Z47221 Z75400 Z75402 BC073766 J00231 BC063384 BC011857 CU680082 CU687682 Z14196 Z14194 TSC_hg19_v1_chr14_-_106478575 Z14182	11899	-	AF267814 AF267818 AY393025 M34025 DQ454568 FJ874017 FJ840306 FJ840308 FJ840341 FJ840342 FJ840347 FJ840348 FJ840351 FJ840353 FJ840354 FJ840356 FJ840361 FJ840364 FJ840365 FJ840368 FJ840373 FJ840378 FJ840401 FJ840402 FJ840404 FJ873822 FJ873825 FJ873827 FJ873829 FJ873831 FJ873832 FJ873834 FJ873841 FJ873843 FJ873845 FJ873851 FJ873852 FJ873854 FJ873856 FJ873879 FJ873880 FJ873882 FJ873889 FJ873891 FJ873893 FJ873896 FJ873900 FJ873905 FJ873906 FJ873907 FJ873908 FJ873917 FJ873919 FJ873920 FJ873927 FJ873937 FJ873944 FJ873960 FJ873973 FJ873980 FJ873983 FJ874001 FJ874004 FJ874006 FJ874007 FJ874011 FJ874012 FJ874016 FJ874021 FJ874022 FJ874032 FJ874033 FJ874035 FJ874041 FJ874060 FJ874071 FJ874092 HM116099 HM116103 HM116104 HM116108 HM116110 HM116111 HM116112 HM116124 HM116125 HM116126 HM116127 HM116132 HM116134 HM116142 HM116150 HM116151 HM116156 HM116157 HM116164 HM116171 HM116176 HM116183 HM116185 HM116186 HM116188 HM116194 HM116200 HM116203 HM116204 HM116207 HM116210 HM116211 HM116212 HM116215 HM116218 HM116224 GU552693 GQ232960 GQ232962 GQ232978 AJ008188 S75886 AJ487496 AY003819 AY994082 EU090242 EU667603 JF810259 AY393312 AY392883 AY392887 AY392891 AY392897 AY392900 AY392903 AY393023 AY393026 AY393027 AY393028 AY393029 AY393030 AY393031 AY393032 AY393033 AY393034 AY393035 AY393036 AY393037 AY393038 AY393040 AY393041 AY393042 AY393043 AY393044 AY393045 AY393046 AY393048 AY393049 AY393050 AY393051 AY393276 AY393277 AY393278 AY393283 AY393285 AY393288 AY393289 AY393290 AY393292 AY393294 AY393298 AY393299 AY393303 AY393304 AY393307 AY393310 AY393311 AY393382 AY393386 AY393390 AY393391 AY393392 AY393393 AY393406 AY393413 AY393416 AY393417 AY393418 AY393419 AY393421 AY393423 AY393435 AY393440 AY393452 AY393554 AY393555 AY393557 AY393558 AY393559 AY393564 AY393565 EU099064 EU099181 EU099246 DQ100785 JN110964 AY955064 JN110468 JN110515 JN110517 JN110539 JN110572 JN110594 JN110907 JN110984 JN110994 JN111158 JN111166 JN111205 AY062324 AM279571 AY866601 AY866658 AM279525 AM279573 AY866680 DQ100676 DQ100927 DQ100946 AM279595 AM279596 AM279599 AM279600 DQ100868 DQ926119 DQ926440 DQ926554 DQ926566 HM995527 HM995209 HM995210 HM995212 HM995214 HM995215 HM995376 HM995377 HM995380 HM995398 HM995401 HM995473 HM995528 HM995531 HM995597 HM995599 HM995814 HM995819 AB063834 AB066852 AB066861 AB066862 AB066864 AB066865 AB066866 AB066868 AB066869 AB066870 AB066871 AB066873 AB066874 AB066878 AB067185 AB067189 AB067221 AB067222 AB067223 AB067226 AB067228 AB067229 AB067231 AB067232 AB363096 AB363107 AB374193 AB374196 AB374197 AB374204 AF035018 AF062155 AF062255 AF129754 AF174046 AF174061 AF174070 AF174071 AF455551 AF460966 AY055482 AY345923 AY866550 AY866584 AY866603 AY866625 AY866961 AY941941 DQ205143 DQ490734 DQ490735 DQ490736 DQ923046 DQ926138 DQ926180 DQ926226 DQ926362 DQ926376 DQ926412 DQ926456 DQ926482 DQ926490 DQ926499 DQ926558 DQ926576 DQ926582 DQ926586 DQ926588 DQ926592 DQ926605 DQ926606 DQ926610 DQ926650 FR820874 GU570276 GU570278 GU570279 GU570280 HM152514 HQ378331 HQ378364 HQ378373 S73953 U00545 U00552 U00555 X64147 M90808 AY393141 AY393143 AY393144 AY393146 AY393147 AY393149 AY393150 X69861 AF062130 AF062268 AF062282 AY172958 S67984 X81695 Z47235 Z47237 Z47243 AK301335 TSC_hg19_v1_chr14_-_106494595 AK057617 BC092449	27928	-	AK129517|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC080557|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089412|IGHM|3507|immunoglobulin heavy constant mu##BC075840|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640724|IGHM|3507|immunoglobulin heavy constant mu##AK097348|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK126543|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640847|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073766|IGHV4-31|28396|immunoglobulin heavy variable 4-31##J00231|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC063384|IGHD|3495|immunoglobulin heavy constant delta##BC011857|IGHM|3507|immunoglobulin heavy constant mu##AK301335|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC092449|IGHA1|3493|immunoglobulin heavy constant alpha 1	3.972519	CTCF.p2:22:0.911	CTCF.p2:-35:0.992	CTCF.p2:-55:0.488	CTCF.p2:61:0.974	CTCF.p2:-74:0.503
chr6	109103613	109103728	reg1007351.p2	11.836	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	-221413	+	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	-221595	+	TSC_hg19_v1_chr6_+_108881027 NM_201559 BC020227 BC021224	-222647	+	TSC_hg19_v1_chr6_+_109169624 AK294574 NM_032131 AK292499 BC030603	65951	+	AF033121 NM_001199934	226520	-	TSC_hg19_v1_chr6_-_109330747 AF033120	227046	-	AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3##BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##NM_201559|FOXO3|2309|forkhead box O3##BC020227|FOXO3|2309|forkhead box O3##BC021224|FOXO3|2309|forkhead box O3##AK294574|ARMC2|84071|armadillo repeat containing 2##NM_032131|ARMC2|84071|armadillo repeat containing 2##AK292499|ARMC2|84071|armadillo repeat containing 2##BC030603|ARMC2|84071|armadillo repeat containing 2##AF033121|SESN1|27244|sestrin 1##NM_001199934|SESN1|27244|sestrin 1##AF033120|SESN1|27244|sestrin 1	0.176408	
chr9	37415340	37415482	reg1008406.p1	11.836	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-294828	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-294903	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-294925	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	7295	+	BC010007 TSC_hg19_v1_chr9_-_37465267	49849	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	49984	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.814014	CTCF.p2:-13:0.814
chr19	18319306	18319438	reg1006753.p2	11.835	+	M28210 TSC_hg19_v1_chr19_-_18314858 AF254795 BC011782 AK293467 AK289559 NM_002866	-4568	-	TSC_hg19_v1_chr19_+_18304077 NM_032683 BC093008 BC005064 BC028146 AF320622 AF416712 AK094091	-15337	+	TSC_hg19_v1_chr19_+_18284633 AB590284 CU676848 CU689078 DQ884410 DQ892016 DQ895206	-34731	+	NM_001098819 U88712	15930	-	AK300888 AK300983 TSC_hg19_v1_chr19_-_18337249 NM_001098818 U88713	17887	-	NM_000923 U66346	39637	-	M28210|RAB3A|5864|RAB3A, member RAS oncogene family##AF254795|RAB3A|5864|RAB3A, member RAS oncogene family##BC011782|RAB3A|5864|RAB3A, member RAS oncogene family##AK293467|RAB3A|5864|RAB3A, member RAS oncogene family##AK289559|RAB3A|5864|RAB3A, member RAS oncogene family##NM_002866|RAB3A|5864|RAB3A, member RAS oncogene family##NM_032683|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC093008|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC005064|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC028146|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AF320622|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AF416712|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AK094091|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##DQ884410|IFI30|10437|interferon, gamma-inducible protein 30##DQ892016|IFI30|10437|interferon, gamma-inducible protein 30##DQ895206|IFI30|10437|interferon, gamma-inducible protein 30##NM_001098819|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U88712|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK300888|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK300983|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##NM_001098818|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U88713|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##NM_000923|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U66346|PDE4C|5143|phosphodiesterase 4C, cAMP-specific	0.995131	CTCF.p2:-35:0.995
chr6	46189057	46189176	reg1006743.p2	11.835	+	AK312790 TSC_hg19_v1_chr6_-_46138695 BC027615 AY358514 AK292842 AK295192 BX647968 NM_021572	-50450	-	TSC_hg19_v1_chr6_+_46097818 AK291276 AB020686	-91252	+	NM_014936 TSC_hg19_v1_chr6_+_46097726 BC018054	-91402	+	CU691584 DQ891658 DQ894845 AK312392 TSC_hg19_v1_chr6_-_46293389	104187	-	D83407 TSC_hg19_v1_chr6_-_46293410 BC038509	104291	-	NM_005822	104512	-	AK312790|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##BC027615|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##AY358514|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##AK292842|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##AK295192|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##BX647968|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##NM_021572|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##AK291276|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##AB020686|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##NM_014936|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##BC018054|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##DQ891658|RCAN2|10231|regulator of calcineurin 2##DQ894845|RCAN2|10231|regulator of calcineurin 2##AK312392|RCAN2|10231|regulator of calcineurin 2##D83407|RCAN2|10231|regulator of calcineurin 2##BC038509|RCAN2|10231|regulator of calcineurin 2##NM_005822|RCAN2|10231|regulator of calcineurin 2	0.800163	CTCF.p2:-6:0.800
chr9	77692191	77692323	reg1008010.p1	11.835	+	TSC_hg19_v1_chr9_-_77643332 BC034033 NM_152420	-48923	-	TSC_hg19_v1_chr9_-_77643210 AK299691	-49047	-	CU689816 EU832520 EU832602 TSC_hg19_v1_chr9_-_77643174	-49092	-	BC001366 TSC_hg19_v1_chr9_-_77703070 AK000566 AK097144 AK023413 BC036804 NM_001127603 NM_017881 BC026243	10831	-	TSC_hg19_v1_chr9_+_77703406 NM_012383	11143	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	11253	+	BC034033|C9orf41|138199|chromosome 9 open reading frame 41##NM_152420|C9orf41|138199|chromosome 9 open reading frame 41##AK299691|C9orf41|138199|chromosome 9 open reading frame 41##EU832520|C9orf41|138199|chromosome 9 open reading frame 41##EU832602|C9orf41|138199|chromosome 9 open reading frame 41##BC001366|C9orf95|54981|chromosome 9 open reading frame 95##AK000566|C9orf95|54981|chromosome 9 open reading frame 95##AK097144|C9orf95|54981|chromosome 9 open reading frame 95##AK023413|C9orf95|54981|chromosome 9 open reading frame 95##BC036804|C9orf95|54981|chromosome 9 open reading frame 95##NM_001127603|C9orf95|54981|chromosome 9 open reading frame 95##NM_017881|C9orf95|54981|chromosome 9 open reading frame 95##BC026243|C9orf95|54981|chromosome 9 open reading frame 95##NM_012383|OSTF1|26578|osteoclast stimulating factor 1##AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1	0.998893	CTCF.p2:3:0.999
chr15	84692511	84692642	reg1008023.p1	11.834	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-369749	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-576348	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-576516	+	NM_001243531	148665	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	451705	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	504896	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.959973	CTCF.p2:13:0.960
chr16	30461204	30461334	reg1009097.p1	11.834	+	TSC_hg19_v1_chr16_-_30457197 AK093889 AX748354 NM_012248	-4040	-	BC016643 BC002381 U43286 TSC_hg19_v1_chr16_-_30457196 AK092003 AK303275 AX747304	-4087	-	CR457335 TSC_hg19_v1_chr16_-_30441339 AK024843 AF212242 AF210430 AY453409 BC001344 NM_024096	-19930	-	TSC_hg19_v1_chr16_+_30484003 NM_001114380 NM_002209 AX794822 AX794826 AK314246	22731	+	BC008777 AX794824 TSC_hg19_v1_chr16_+_30484062 AK298674 AX794810 Y00796 AK303190	22803	+	TSC_hg19_v1_chr16_+_30484116 AX794821 CU679099	22864	+	AK093889|SEPHS2|22928|selenophosphate synthetase 2##NM_012248|SEPHS2|22928|selenophosphate synthetase 2##BC016643|SEPHS2|22928|selenophosphate synthetase 2##BC002381|SEPHS2|22928|selenophosphate synthetase 2##U43286|SEPHS2|22928|selenophosphate synthetase 2##AK092003|SEPHS2|22928|selenophosphate synthetase 2##AK303275|SEPHS2|22928|selenophosphate synthetase 2##CR457335|DCTPP1|79077|dCTP pyrophosphatase 1##AK024843|DCTPP1|79077|dCTP pyrophosphatase 1##AF212242|DCTPP1|79077|dCTP pyrophosphatase 1##AF210430|DCTPP1|79077|dCTP pyrophosphatase 1##AY453409|DCTPP1|79077|dCTP pyrophosphatase 1##BC001344|DCTPP1|79077|dCTP pyrophosphatase 1##NM_024096|DCTPP1|79077|dCTP pyrophosphatase 1##NM_001114380|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##NM_002209|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK314246|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##BC008777|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK298674|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##Y00796|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK303190|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)	0.975882	CTCF.p2:-4:0.976
chr2	110420579	110420714	reg1009688.p1	11.834	+	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	-48701	+	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	-48921	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	-49165	-	AL136868 NM_001037866 NM_001123363 NM_032260	129688	+	NM_005054 U64675	131319	+	BC094740 NM_001205288 NM_033514	235362	+	BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3	0.215568	CTCF.p2:9:0.216
chr7	56142120	56142240	reg1006954.p2	11.834	+	AK297793 TSC_hg19_v1_chr7_+_56132003 AY323911 BC006159 BC015600 BC000224	-10159	+	BC065222 TSC_hg19_v1_chr7_+_56131978 CR936757 AK298605 CR936749 AY359103 BC084539 AK297042 AK301627 AL050037	-10195	+	NM_001042469 NM_001042470 NM_001130069 NM_001146333 NM_015411 TSC_hg19_v1_chr7_+_56131966 AK075477 AK300488 BC111092	-10239	+	BC069655 BC069679 BC069738 BC069754 X80590 BC051327 AK300928 AK293180 AK299429 AK309503 AK312851 NM_006213	18466	-	AY605046 CU688146 EU832651 EU832729 AY633613 BC015639 TSC_hg19_v1_chr7_-_56174144 BC100275 Z36851 BC003079 BC071985 BC066331	31945	-	TSC_hg19_v1_chr7_-_56174151 AF078845	31979	-	AK297793|SUMF2|25870|sulfatase modifying factor 2##AY323911|SUMF2|25870|sulfatase modifying factor 2##BC006159|SUMF2|25870|sulfatase modifying factor 2##BC015600|SUMF2|25870|sulfatase modifying factor 2##BC000224|SUMF2|25870|sulfatase modifying factor 2##BC065222|SUMF2|25870|sulfatase modifying factor 2##CR936757|SUMF2|25870|sulfatase modifying factor 2##AK298605|SUMF2|25870|sulfatase modifying factor 2##CR936749|SUMF2|25870|sulfatase modifying factor 2##AY359103|SUMF2|25870|sulfatase modifying factor 2##BC084539|SUMF2|25870|sulfatase modifying factor 2##AK297042|SUMF2|25870|sulfatase modifying factor 2##AK301627|SUMF2|25870|sulfatase modifying factor 2##AL050037|SUMF2|25870|sulfatase modifying factor 2##NM_001042469|SUMF2|25870|sulfatase modifying factor 2##NM_001042470|SUMF2|25870|sulfatase modifying factor 2##NM_001130069|SUMF2|25870|sulfatase modifying factor 2##NM_001146333|SUMF2|25870|sulfatase modifying factor 2##NM_015411|SUMF2|25870|sulfatase modifying factor 2##AK075477|SUMF2|25870|sulfatase modifying factor 2##AK300488|SUMF2|25870|sulfatase modifying factor 2##BC111092|SUMF2|25870|sulfatase modifying factor 2##BC069655|PHKG1|5260|phosphorylase kinase, gamma 1 (muscle)##BC069679|PHKG1|5260|phosphorylase kinase, gamma 1 (muscle)##BC069738|PHKG1|5260|phosphorylase kinase, gamma 1 (muscle)##BC069754|PHKG1|5260|phosphorylase kinase, gamma 1 (muscle)##X80590|PHKG1|5260|phosphorylase kinase, gamma 1 (muscle)##BC051327|PHKG1|5260|phosphorylase kinase, gamma 1 (muscle)##AK300928|PHKG1|5260|phosphorylase kinase, gamma 1 (muscle)##AK293180|PHKG1|5260|phosphorylase kinase, gamma 1 (muscle)##AK299429|PHKG1|5260|phosphorylase kinase, gamma 1 (muscle)##AK309503|PHKG1|5260|phosphorylase kinase, gamma 1 (muscle)##AK312851|PHKG1|5260|phosphorylase kinase, gamma 1 (muscle)##NM_006213|PHKG1|5260|phosphorylase kinase, gamma 1 (muscle)##AY605046|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##EU832651|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##EU832729|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##AY633613|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##BC015639|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##BC100275|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##BC003079|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##BC071985|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##BC066331|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##AF078845|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2	0.981048	CTCF.p2:4:0.981
chr3	108381131	108381270	reg1007278.p1	11.832	+	AK023389 TSC_hg19_v1_chr3_+_108308549 AY227654 AK023138 BC056674 AK297451 BC063882 BC039018 AY227651	-72641	+	TSC_hg19_v1_chr3_-_108308493 AK310446 NM_020890	-72723	-	NM_014648 TSC_hg19_v1_chr3_+_108308395	-72835	+	HQ258043 AM050721 BC113502 BC113528 BC069318 AF290873 AF323084 AY358655 NM_032579 TSC_hg19_v1_chr3_-_108476258	94945	-	AK291991 AJ240085 AF161547 NM_016388 BC025713 AJ224878	160394	+	AF110003 EU832759 GQ129299 AF110002 BC103993 BC103994 AB593147 NM_005459	291411	-	AK023389|DZIP3|9666|DAZ interacting protein 3, zinc finger##AY227654|DZIP3|9666|DAZ interacting protein 3, zinc finger##AK023138|DZIP3|9666|DAZ interacting protein 3, zinc finger##BC056674|DZIP3|9666|DAZ interacting protein 3, zinc finger##AK297451|DZIP3|9666|DAZ interacting protein 3, zinc finger##BC063882|DZIP3|9666|DAZ interacting protein 3, zinc finger##BC039018|DZIP3|9666|DAZ interacting protein 3, zinc finger##AY227651|DZIP3|9666|DAZ interacting protein 3, zinc finger##AK310446|KIAA1524|57650|KIAA1524##NM_020890|KIAA1524|57650|KIAA1524##NM_014648|DZIP3|9666|DAZ interacting protein 3, zinc finger##HQ258043|RETNLB|84666|resistin like beta##AM050721|RETNLB|84666|resistin like beta##BC113502|RETNLB|84666|resistin like beta##BC113528|RETNLB|84666|resistin like beta##BC069318|RETNLB|84666|resistin like beta##AF290873|RETNLB|84666|resistin like beta##AF323084|RETNLB|84666|resistin like beta##AY358655|RETNLB|84666|resistin like beta##NM_032579|RETNLB|84666|resistin like beta##AK291991|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ240085|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AF161547|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##NM_016388|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##BC025713|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ224878|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AF110003|GUCA1C|9626|guanylate cyclase activator 1C##EU832759|GUCA1C|9626|guanylate cyclase activator 1C##GQ129299|GUCA1C|9626|guanylate cyclase activator 1C##AF110002|GUCA1C|9626|guanylate cyclase activator 1C##BC103993|GUCA1C|9626|guanylate cyclase activator 1C##BC103994|GUCA1C|9626|guanylate cyclase activator 1C##AB593147|GUCA1C|9626|guanylate cyclase activator 1C##NM_005459|GUCA1C|9626|guanylate cyclase activator 1C	0.999379	CTCF.p2:-13:0.999
chr16	48265882	48265992	reg1007510.p2	11.831	+	AY196326 AY040220 NM_033226	-85317	-	TSC_hg19_v1_chr16_+_47495241 X84908 CR936710 BC033657 AK309226	-770698	+	TSC_hg19_v1_chr16_+_47495206 NM_000293 NM_001031835 AK298588	-770749	+	AY040219 NM_033151	244	-	AF367202 AF411579 NM_032583 NM_145186	3150	-	TSC_hg19_v1_chr16_+_48278210 AJ548761 NM_031490	12257	+	AY196326|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040220|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##NM_033226|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##X84908|PHKB|5257|phosphorylase kinase, beta##CR936710|PHKB|5257|phosphorylase kinase, beta##BC033657|PHKB|5257|phosphorylase kinase, beta##AK309226|PHKB|5257|phosphorylase kinase, beta##NM_000293|PHKB|5257|phosphorylase kinase, beta##NM_001031835|PHKB|5257|phosphorylase kinase, beta##AY040219|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_033151|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF367202|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF411579|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_032583|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_145186|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AJ548761|LONP2|83752|lon peptidase 2, peroxisomal##NM_031490|LONP2|83752|lon peptidase 2, peroxisomal	0.338174	CTCF.p2:-6:0.338
chr3	43897304	43897408	reg1007060.p1	11.831	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-164935	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-233843	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-233918	-	AK093476 AX748152 NM_001145030	386021	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	482274	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	482591	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.655401	CTCF.p2:-1:0.655
chrX	7504297	7504414	reg1007317.p1	11.830	+	NM_000351 M16505 J04964 AK314034	-366854	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	-438163	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	-438404	+	AF167081 NM_013452	305947	+	AK289888 U03886 NM_004650 BC020746	391095	-	AK304586 TSC_hg19_v1_chrX_-_7895766 NM_001142389 NM_001172672	391416	-	NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##AF167081|VCX|26609|variable charge, X-linked##NM_013452|VCX|26609|variable charge, X-linked##AK289888|PNPLA4|8228|patatin-like phospholipase domain containing 4##U03886|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_004650|PNPLA4|8228|patatin-like phospholipase domain containing 4##BC020746|PNPLA4|8228|patatin-like phospholipase domain containing 4##AK304586|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001142389|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001172672|PNPLA4|8228|patatin-like phospholipase domain containing 4	0.044377	
chr1	211687431	211687569	reg1009233.p1	11.829	+	AY191519 NM_001164688 NM_183059	-21242	-	TSC_hg19_v1_chr1_+_211556168 BC005997	-131332	+	TSC_hg19_v1_chr1_+_211556144 AK130858	-131353	+	AF364518 TSC_hg19_v1_chr1_-_211751805	64262	-	AB451467 TSC_hg19_v1_chr1_-_211752048	64500	-	TSC_hg19_v1_chr1_-_211752056 BC121015 BC121016 NM_021194	64588	-	AY191519|RD3|343035|retinal degeneration 3##NM_001164688|RD3|343035|retinal degeneration 3##NM_183059|RD3|343035|retinal degeneration 3##BC005997|LINC00467|84791|long intergenic non-protein coding RNA 467##AK130858|LINC00467|84791|long intergenic non-protein coding RNA 467##AF364518|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121015|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121016|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##NM_021194|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1	0.877802	CTCF.p2:2:0.878
chr19	11314632	11314737	reg1007442.p2	11.829	+	TSC_hg19_v1_chr19_-_11308465 AK000011 AK225038	-6222	-	TSC_hg19_v1_chr19_-_11308222 BC082762 AB284125 NM_001136191	-6426	-	AB528156 AY639929 CU687364 NM_015493	-9459	-	TSC_hg19_v1_chr19_+_11350294 NM_018687 AY358356	35612	+	AB384597 TSC_hg19_v1_chr19_-_11373144 AB037816 BC146786 BC095483 NM_020812	58454	-	AF133424 NM_012466 BC029908	92149	+	AK000011|KANK2|25959|KN motif and ankyrin repeat domains 2##AK225038|KANK2|25959|KN motif and ankyrin repeat domains 2##BC082762|KANK2|25959|KN motif and ankyrin repeat domains 2##AB284125|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_001136191|KANK2|25959|KN motif and ankyrin repeat domains 2##AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_018687|C19orf80|55908|chromosome 19 open reading frame 80##AY358356|C19orf80|55908|chromosome 19 open reading frame 80##AB037816|DOCK6|57572|dedicator of cytokinesis 6##BC146786|DOCK6|57572|dedicator of cytokinesis 6##BC095483|DOCK6|57572|dedicator of cytokinesis 6##NM_020812|DOCK6|57572|dedicator of cytokinesis 6##NM_012466|TSPAN16|26526|tetraspanin 16##BC029908|TSPAN16|26526|tetraspanin 16	0.999086	CTCF.p2:-4:0.999
chr19	45157804	45157949	reg1009363.p1	11.829	+	TSC_hg19_v1_chr19_+_45147209 AK300349 AK094177 BC015542	-10660	+	TSC_hg19_v1_chr19_+_45147180 AK290946	-10695	+	TSC_hg19_v1_chr19_+_45147159 NM_001135768 NM_001135769 NM_001135770 NM_006505	-10745	+	BC083499 NM_001127893 NM_020219	16847	+	BC144608 NM_001039213	44544	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	94105	+	AK300349|PVR|5817|poliovirus receptor##AK094177|PVR|5817|poliovirus receptor##BC015542|PVR|5817|poliovirus receptor##AK290946|PVR|5817|poliovirus receptor##NM_001135768|PVR|5817|poliovirus receptor##NM_001135769|PVR|5817|poliovirus receptor##NM_001135770|PVR|5817|poliovirus receptor##NM_006505|PVR|5817|poliovirus receptor##BC083499|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_001127893|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_020219|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3	0.981293	CTCF.p2:5:0.981
chr7	87872705	87872856	reg1007406.p1	11.829	+	TSC_hg19_v1_chr7_-_87856292 AK296601 NM_198901	-16486	-	TSC_hg19_v1_chr7_-_87849391 AK129770 AK310366 NM_003130	-23375	-	AB464235 L12387 TSC_hg19_v1_chr7_-_87849352 AK295225 BC011025 M32886	-23428	-	BC020600 AF423422 AF423423 AK026806 AK307644 TSC_hg19_v1_chr7_-_87936207 NM_001205315 NM_001205316 NM_024636	63434	-	BC140826 BC140829 AK056672 AY295769 NM_181646	515936	+	BC028365 NM_152706	552250	-	AK296601|SRI|6717|sorcin##NM_198901|SRI|6717|sorcin##AK129770|SRI|6717|sorcin##AK310366|SRI|6717|sorcin##NM_003130|SRI|6717|sorcin##L12387|SRI|6717|sorcin##AK295225|SRI|6717|sorcin##BC011025|SRI|6717|sorcin##M32886|SRI|6717|sorcin##BC020600|STEAP4|79689|STEAP family member 4##AF423422|STEAP4|79689|STEAP family member 4##AF423423|STEAP4|79689|STEAP family member 4##AK026806|STEAP4|79689|STEAP family member 4##AK307644|STEAP4|79689|STEAP family member 4##NM_001205315|STEAP4|79689|STEAP family member 4##NM_001205316|STEAP4|79689|STEAP family member 4##NM_024636|STEAP4|79689|STEAP family member 4##BC140826|ZNF804B|219578|zinc finger protein 804B##BC140829|ZNF804B|219578|zinc finger protein 804B##AK056672|ZNF804B|219578|zinc finger protein 804B##AY295769|ZNF804B|219578|zinc finger protein 804B##NM_181646|ZNF804B|219578|zinc finger protein 804B##BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62	0.432045	CTCF.p2:-21:0.432
chr8	10444937	10445075	reg1009320.p1	11.829	+	BC033497 NM_001197020 NM_198464 AY358867	-61939	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	-491943	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	-533127	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	67634	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	85153	+	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	142978	-	BC033497|PRSS55|203074|protease, serine, 55##NM_001197020|PRSS55|203074|protease, serine, 55##NM_198464|PRSS55|203074|protease, serine, 55##AY358867|PRSS55|203074|protease, serine, 55##AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7	0.282413	CTCF.p2:-5:0.282
chr9	69765275	69765413	reg1008810.p1	11.829	+	AL136793 NM_001098805	-383364	+	AF265442 BC069006 AK293173 NM_001085457	-502790	-	NM_001085476	-563141	-	NM_001126334	413470	-	NM_001099279 NM_199244	664386	-	CU688346 TSC_hg19_v1_chr9_-_70490092	724737	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.99859	CTCF.p2:10:0.999
chr16	5106507	5106616	reg1007642.p1	11.828	+	TSC_hg19_v1_chr16_-_5083937 AK127952 AK314320 AK302916 AK025570 NM_016256	-22624	-	TSC_hg19_v1_chr16_-_5083927 AF187072 AK026122 BC012194	-22640	-	TSC_hg19_v1_chr16_+_5083673 AK055222	-22875	+	AK300708 TSC_hg19_v1_chr16_-_5115921	9359	-	TSC_hg19_v1_chr16_-_5115951 AK075242	9394	-	TSC_hg19_v1_chr16_-_5116030 BC033681 AY358483 NM_001098514 NM_152459	9526	-	AK127952|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK314320|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK302916|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK025570|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##NM_016256|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AF187072|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK026122|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##BC012194|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK055222|LOC100507589|100507589|uncharacterized LOC100507589##AK300708|C16orf89|146556|chromosome 16 open reading frame 89##AK075242|C16orf89|146556|chromosome 16 open reading frame 89##BC033681|C16orf89|146556|chromosome 16 open reading frame 89##AY358483|C16orf89|146556|chromosome 16 open reading frame 89##NM_001098514|C16orf89|146556|chromosome 16 open reading frame 89##NM_152459|C16orf89|146556|chromosome 16 open reading frame 89	0.572602	CTCF.p2:-10:0.573
chr11	35259782	35259922	reg1008478.p1	11.827	+	TSC_hg19_v1_chr11_+_35198199 AK129808	-61640	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-98992	+	TSC_hg19_v1_chr11_+_35160821 M59040	-99034	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	18973	-	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	180859	-	TSC_hg19_v1_chr11_-_35441106 NM_004171	181251	-	AK129808|CD44|960|CD44 molecule (Indian blood group)##AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)##CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.912737	CTCF.p2:9:0.913
chr5	139452926	139453093	reg1007371.p2	11.827	+	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	-30164	-	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	-30281	-	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	-277603	+	TSC_hg19_v1_chr5_+_139493703 M96684 NM_005859 BC110574 BC110594 BC036087 AB464679 BT019388	40718	+	BC041380 NM_001007189	52510	+	TSC_hg19_v1_chr5_+_139554672 NM_032412	101645	+	U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##M96684|PURA|5813|purine-rich element binding protein A##NM_005859|PURA|5813|purine-rich element binding protein A##BC110574|PURA|5813|purine-rich element binding protein A##BC110594|PURA|5813|purine-rich element binding protein A##BC036087|PURA|5813|purine-rich element binding protein A##BT019388|PURA|5813|purine-rich element binding protein A##BC041380|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##NM_001007189|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##NM_032412|C5orf32|84418|chromosome 5 open reading frame 32	0.056804	
chr6	3748627	3748757	reg1008783.p1	11.827	+	TSC_hg19_v1_chr6_-_3720312 BC031944	-28382	-	BC040876 NM_015482	-291929	-	TSC_hg19_v1_chr6_-_3456513 AL110245	-292178	-	NM_183373 TSC_hg19_v1_chr6_-_3752248	3554	-	BC001261 NM_012135 Y18503	100934	+	TSC_hg19_v1_chr6_+_4021647 BC034969 NM_003913 AK291244 AB011108 AF283465 AB385345 AY029347	272897	+	BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##NM_183373|PXDC1|221749|PX domain containing 1##BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B##BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	0.050178	
chr11	180291	180408	reg1007721.p1	11.826	+	None	None	None	None	None	None	None	None	None	AY026938 BC069287 NM_001097610 NM_145651 BC111427 BC111433 AB590098 AM392647 AM393773 AM393805	12739	+	NM_053280 AY713299 AL133658	16428	+	EU832497 EU832578 TSC_hg19_v1_chr11_-_207355	27002	-	AY026938|SCGB1C1|147199|secretoglobin, family 1C, member 1##BC069287|SCGB1C1|147199|secretoglobin, family 1C, member 1##NM_001097610|LOC653486|653486|secretoglobin, family 1C, member 1-like##NM_145651|SCGB1C1|147199|secretoglobin, family 1C, member 1##BC111427|SCGB1C1|147199|secretoglobin, family 1C, member 1##BC111433|SCGB1C1|147199|secretoglobin, family 1C, member 1##AM392647|SCGB1C1|147199|secretoglobin, family 1C, member 1##AM393773|SCGB1C1|147199|secretoglobin, family 1C, member 1##AM393805|SCGB1C1|147199|secretoglobin, family 1C, member 1##NM_053280|ODF3|113746|outer dense fiber of sperm tails 3##AY713299|ODF3|113746|outer dense fiber of sperm tails 3##AL133658|ODF3|113746|outer dense fiber of sperm tails 3##EU832497|BET1L|51272|blocked early in transport 1 homolog (S. cerevisiae)-like##EU832578|BET1L|51272|blocked early in transport 1 homolog (S. cerevisiae)-like	1.938905	CTCF.p2:-27:0.994	CTCF.p2:35:0.945
chr1	48463400	48463528	reg1006961.p1	11.826	+	NM_001194986	-903	-	AF042832 NM_004474	-561776	+	AF275722 NM_012186	-581721	+	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	224928	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	474214	-	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	474381	-	NM_001194986|LOC388630|388630|UPF0632 protein A##AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6	0.997936	CTCF.p2:0:0.998
chr3	136824243	136824390	reg1009001.p1	11.826	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-147486	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-174979	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	-243224	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	658831	+	AK098474 NM_001002026 AF349452	893363	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	904687	+	AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18	0.952277	CTCF.p2:-10:0.933
chr9	5976830	5976958	reg1009272.p1	11.826	+	BC108654 TSC_hg19_v1_chr9_-_5968443	-8486	-	U06654 BC014423 AK312149 NM_005511 U06452	-86040	+	TSC_hg19_v1_chr9_-_5833082 NM_024896	-143816	-	TSC_hg19_v1_chr9_-_6007953 NM_001017969	31070	-	AF039023 AK300408 BC098406 TSC_hg19_v1_chr9_-_6015616 AK307840 BX537405 NM_001243202 NM_001243203 NM_012416	38737	-	NM_001199640 NM_001199641 NM_033439 AK295908 AK313414 TSC_hg19_v1_chr9_+_6215806 AK303943 BC047085	238902	+	U06654|MLANA|2315|melan-A##BC014423|MLANA|2315|melan-A##AK312149|MLANA|2315|melan-A##NM_005511|MLANA|2315|melan-A##U06452|MLANA|2315|melan-A##NM_024896|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##NM_001017969|KIAA2026|158358|KIAA2026##AF039023|RANBP6|26953|RAN binding protein 6##AK300408|RANBP6|26953|RAN binding protein 6##BC098406|RANBP6|26953|RAN binding protein 6##BX537405|RANBP6|26953|RAN binding protein 6##NM_001243202|RANBP6|26953|RAN binding protein 6##NM_001243203|RANBP6|26953|RAN binding protein 6##NM_012416|RANBP6|26953|RAN binding protein 6##NM_001199640|IL33|90865|interleukin 33##NM_001199641|IL33|90865|interleukin 33##NM_033439|IL33|90865|interleukin 33##AK295908|IL33|90865|interleukin 33##AK313414|IL33|90865|interleukin 33##AK303943|IL33|90865|interleukin 33##BC047085|IL33|90865|interleukin 33	0.0	
chr5	140855408	140855530	reg1006571.p1	11.823	+	AF152321 AF152506 TSC_hg19_v1_chr5_+_140810427	-45073	+	TSC_hg19_v1_chr5_+_140810181 AB011160	-45276	+	TSC_hg19_v1_chr5_+_140810137 NM_003735 NM_032094	-45322	+	TSC_hg19_v1_chr5_+_140855552 BC006439 NM_002588 NM_032402 NM_032403 BC019299 BC027451 L11373 BC026218 BC063437	97	+	TSC_hg19_v1_chr5_+_140855606 AF152337 AF152524 CU675407 CU676422 CU693162 DQ893469 DQ896354	174	+	TSC_hg19_v1_chr5_+_140864626 BC042650 AF152338 AF152525 BC101035 BC101037 BC101038 NM_018928 NM_032406 BC101036	9215	+	AF152321|PCDHGA12|26025|protocadherin gamma subfamily A, 12##AF152506|PCDHGA12|26025|protocadherin gamma subfamily A, 12##AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12##NM_003735|PCDHGA12|26025|protocadherin gamma subfamily A, 12##NM_032094|PCDHGA12|26025|protocadherin gamma subfamily A, 12##BC006439|PCDHGC3|5098|protocadherin gamma subfamily C, 3##NM_002588|PCDHGC3|5098|protocadherin gamma subfamily C, 3##NM_032402|PCDHGC3|5098|protocadherin gamma subfamily C, 3##NM_032403|PCDHGC3|5098|protocadherin gamma subfamily C, 3##BC019299|PCDHGC3|5098|protocadherin gamma subfamily C, 3##BC027451|PCDHGC3|5098|protocadherin gamma subfamily C, 3##L11373|PCDHGC3|5098|protocadherin gamma subfamily C, 3##BC026218|PCDHGC3|5098|protocadherin gamma subfamily C, 3##BC063437|PCDHGC3|5098|protocadherin gamma subfamily C, 3##AF152337|PCDHGC3|5098|protocadherin gamma subfamily C, 3##AF152524|PCDHGC3|5098|protocadherin gamma subfamily C, 3##DQ893469|PCDHGC3|5098|protocadherin gamma subfamily C, 3##DQ896354|PCDHGC3|5098|protocadherin gamma subfamily C, 3##BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4	0.0	
chr6	33553538	33553675	reg1006270.p1	11.822	+	TSC_hg19_v1_chr6_-_33548037 AK303422 AK293547 NM_001188	-5563	-	U23765 U16811 TSC_hg19_v1_chr6_-_33547998 X84213 BC004431 BC032789 BC110337 AK091807 AK292093	-5691	-	TSC_hg19_v1_chr6_+_33422352 AK313571 AK122644 NM_152735 BC014978	-131234	+	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	35588	+	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	125857	-	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	125907	-	AK303422|BAK1|578|BCL2-antagonist/killer 1##AK293547|BAK1|578|BCL2-antagonist/killer 1##NM_001188|BAK1|578|BCL2-antagonist/killer 1##U23765|BAK1|578|BCL2-antagonist/killer 1##U16811|BAK1|578|BCL2-antagonist/killer 1##X84213|BAK1|578|BCL2-antagonist/killer 1##BC004431|BAK1|578|BCL2-antagonist/killer 1##BC032789|BAK1|578|BCL2-antagonist/killer 1##BC110337|BAK1|578|BCL2-antagonist/killer 1##AK091807|BAK1|578|BCL2-antagonist/killer 1##AK292093|BAK1|578|BCL2-antagonist/killer 1##AK313571|ZBTB9|221504|zinc finger and BTB domain containing 9##AK122644|ZBTB9|221504|zinc finger and BTB domain containing 9##NM_152735|ZBTB9|221504|zinc finger and BTB domain containing 9##BC014978|ZBTB9|221504|zinc finger and BTB domain containing 9##D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125	0.992541	CTCF.p2:-10:0.993
chr3	40233496	40233622	reg1006706.p2	11.821	+	TSC_hg19_v1_chr3_+_39851138 BC092512 AK126013 AF396687 NM_015460 BC109311 BC109312	-382384	+	NM_182935 BC075796 AK127034 AK290187 BC022471	-724440	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	-784417	+	BC031275 AK057627 AK309874 AK309698 TSC_hg19_v1_chr3_-_40351022 BC045736 BC118565 BC106900	117509	-	NM_005875 TSC_hg19_v1_chr3_+_40351187 AK223448 BC006996 AF077052	117621	+	TSC_hg19_v1_chr3_+_40351197 AF263452	117647	+	BC092512|MYRIP|25924|myosin VIIA and Rab interacting protein##AK126013|MYRIP|25924|myosin VIIA and Rab interacting protein##AF396687|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_015460|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109311|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109312|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA##BC031275|FLJ33065|440952|uncharacterized LOC440952##AK057627|FLJ33065|440952|uncharacterized LOC440952##AK309874|FLJ33065|440952|uncharacterized LOC440952##BC045736|FLJ33065|440952|uncharacterized LOC440952##BC118565|FLJ33065|440952|uncharacterized LOC440952##BC106900|FLJ33065|440952|uncharacterized LOC440952##NM_005875|EIF1B|10289|eukaryotic translation initiation factor 1B##AK223448|EIF1B|10289|eukaryotic translation initiation factor 1B##BC006996|EIF1B|10289|eukaryotic translation initiation factor 1B##AF077052|EIF1B|10289|eukaryotic translation initiation factor 1B##AF263452|EIF1B|10289|eukaryotic translation initiation factor 1B	0.329802	CTCF.p2:-10:0.330
chr4	18595282	18595422	reg1006241.p2	11.821	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-571886	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-782741	+	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	-783079	-	AB017168 NM_004787 BC117190 BC143978 AF133270	1659984	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	2106715	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	2390277	-	AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16##AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4	0.98512	CTCF.p2:7:0.985
chrX	114963469	114963629	reg1006940.p1	11.821	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-135681	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-166507	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-167943	+	BC003645 TSC_hg19_v1_chrX_-_115085443	121890	-	AK313927 NM_000686 X87723 U16957	338446	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	604218	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:21:0.429
chr14	77251256	77251391	reg1009303.p1	11.820	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	-22271	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	-22868	+	TSC_hg19_v1_chr14_+_77227817 AK094330	-23523	+	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	27887	-	TSC_hg19_v1_chr14_-_77279257 NM_015305	27939	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	41472	+	BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B	1.657482	CTCF.p2:-12:0.985	CTCF.p2:78:0.672
chr18	24584547	24584648	reg1005736.p2	11.820	+	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	-138881	-	U63623 NM_004028	-142043	-	AF542549 NM_198991	-364290	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	138282	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	180636	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	1172440	-	AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##U63623|AQP4|361|aquaporin 4##NM_004028|AQP4|361|aquaporin 4##AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	0.933852	CTCF.p2:0:0.934
chr8	124172807	124172931	reg1008227.p1	11.820	+	TSC_hg19_v1_chr8_+_124084951 BC101724 BC111954 BC143523 BC143525 BC105800 AK094612	-87899	+	TSC_hg19_v1_chr8_+_124084927 AK056434 NM_001145088 NM_145647	-87956	+	TSC_hg19_v1_chr8_-_124054594 NM_001134671 NM_024295	-118250	-	NM_032899 NM_207006 BC052300 TSC_hg19_v1_chr8_+_124194829	21921	+	TSC_hg19_v1_chr8_+_124194906 BC007828 CU690902	22114	+	CU690903 TSC_hg19_v1_chr8_-_124220025	47106	-	BC101724|WDR67|93594|WD repeat domain 67##BC111954|WDR67|93594|WD repeat domain 67##BC143523|WDR67|93594|WD repeat domain 67##BC143525|WDR67|93594|WD repeat domain 67##BC105800|WDR67|93594|WD repeat domain 67##AK094612|WDR67|93594|WD repeat domain 67##AK056434|WDR67|93594|WD repeat domain 67##NM_001145088|WDR67|93594|WD repeat domain 67##NM_145647|WDR67|93594|WD repeat domain 67##NM_001134671|DERL1|79139|Der1-like domain family, member 1##NM_024295|DERL1|79139|Der1-like domain family, member 1##NM_032899|FAM83A|84985|family with sequence similarity 83, member A##NM_207006|FAM83A|84985|family with sequence similarity 83, member A##BC052300|FAM83A|84985|family with sequence similarity 83, member A##BC007828|FAM83A|84985|family with sequence similarity 83, member A	0.620407	CTCF.p2:-22:0.604
chr8	41400348	41400469	reg1008402.p1	11.820	+	TSC_hg19_v1_chr8_+_41386779 AK095334 AK313373	-13636	+	NM_032336 AK299207 BC027454 TSC_hg19_v1_chr8_+_41386745 BC005995	-13671	+	AF068291 TSC_hg19_v1_chr8_+_41348140 BC012032 NM_001002296	-52259	+	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	35286	+	AB587362 AK057898 NM_152568	104467	-	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	122355	-	AK095334|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK313373|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##NM_032336|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK299207|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC027454|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC005995|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AF068291|GOLGA7|51125|golgin A7##BC012032|GOLGA7|51125|golgin A7##NM_001002296|GOLGA7|51125|golgin A7##NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic	0.10333	
chrX	136007423	136007556	reg1006796.p1	11.820	+	TSC_hg19_v1_chrX_+_135991587 AK055694	-15933	+	TSC_hg19_v1_chrX_-_135962939 NM_001164803 NM_002139	-44554	-	TSC_hg19_v1_chrX_-_135962882 BC006550 BC007435 BX647131 AK091520 AK096015 AK304573 AK304868 AK309911	-44595	-	BC069439 NM_054021 CU686814	106346	-	TSC_hg19_v1_chrX_+_136648313 AF028706 NM_003413	640840	+	EU532020 TSC_hg19_v1_chrX_+_136648691 BC113393 BC113395 AB464363 HQ258447	641278	+	NM_001164803|RBMX|27316|RNA binding motif protein, X-linked##NM_002139|RBMX|27316|RNA binding motif protein, X-linked##BC006550|RBMX|27316|RNA binding motif protein, X-linked##BC007435|RBMX|27316|RNA binding motif protein, X-linked##BX647131|RBMX|27316|RNA binding motif protein, X-linked##AK091520|RBMX|27316|RNA binding motif protein, X-linked##AK096015|RBMX|27316|RNA binding motif protein, X-linked##AK304573|RBMX|27316|RNA binding motif protein, X-linked##AK304868|RBMX|27316|RNA binding motif protein, X-linked##AK309911|RBMX|27316|RNA binding motif protein, X-linked##BC069439|GPR101|83550|G protein-coupled receptor 101##NM_054021|GPR101|83550|G protein-coupled receptor 101##AF028706|ZIC3|7547|Zic family member 3##NM_003413|ZIC3|7547|Zic family member 3##EU532020|ZIC3|7547|Zic family member 3##BC113393|ZIC3|7547|Zic family member 3##BC113395|ZIC3|7547|Zic family member 3##HQ258447|ZIC3|7547|Zic family member 3	0.990071	CTCF.p2:14:0.990
chr16	6693204	6693331	reg1008934.p1	11.819	+	TSC_hg19_v1_chr16_+_6533765 BC033885	-159492	+	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	-624042	+	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	-1545499	-	AK001027 NM_001142334	130542	+	AF094849 AF109106 AF229057 NM_145891 NM_145892 NM_145893	689483	+	TSC_hg19_v1_chr16_+_8715563 NM_024109 AK315383 BC001908 AK022495	2022273	+	BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_024109|METTL22|79091|methyltransferase like 22##AK315383|METTL22|79091|methyltransferase like 22##BC001908|METTL22|79091|methyltransferase like 22##AK022495|METTL22|79091|methyltransferase like 22	0.989491	CTCF.p2:10:0.989
chr8	122654612	122654761	reg1009479.p1	11.819	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-1060	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-830180	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-830416	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	1139225	+	BC042145 TSC_hg19_v1_chr8_+_123794000	1139308	+	TSC_hg19_v1_chr8_+_123794108 AB020661	1139417	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.9961	CTCF.p2:5:0.996
chr1	156860033	156860149	reg1006718.p2	11.818	+	M23102 TSC_hg19_v1_chr1_+_156830655 BC136554 BC144239 NM_001012331 NM_002529 AK290759 AK312704 BC062580	-29425	+	AF064078 AK310760 NM_014215	-31403	-	AB528908 EU832614 EU832686 AF097744 AK222737 AY763100 AF051325 AJ000553 AY763099 BC012107 AK313706 NM_001161441 NM_001161442 NM_001161444 NM_003975	-73522	-	NM_001080471	3431	+	AK292342 NM_144702 BC033790	30341	+	BC057394 NM_014784 NM_198236	155070	-	M23102|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC136554|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC144239|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001012331|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_002529|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK290759|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK312704|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC062580|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AF064078|INSRR|3645|insulin receptor-related receptor##AK310760|INSRR|3645|insulin receptor-related receptor##NM_014215|INSRR|3645|insulin receptor-related receptor##EU832614|SH2D2A|9047|SH2 domain containing 2A##EU832686|SH2D2A|9047|SH2 domain containing 2A##AF097744|SH2D2A|9047|SH2 domain containing 2A##AK222737|SH2D2A|9047|SH2 domain containing 2A##AY763100|SH2D2A|9047|SH2 domain containing 2A##AF051325|SH2D2A|9047|SH2 domain containing 2A##AJ000553|SH2D2A|9047|SH2 domain containing 2A##AY763099|SH2D2A|9047|SH2 domain containing 2A##BC012107|SH2D2A|9047|SH2 domain containing 2A##AK313706|SH2D2A|9047|SH2 domain containing 2A##NM_001161441|SH2D2A|9047|SH2 domain containing 2A##NM_001161442|SH2D2A|9047|SH2 domain containing 2A##NM_001161444|SH2D2A|9047|SH2 domain containing 2A##NM_003975|SH2D2A|9047|SH2 domain containing 2A##NM_001080471|PEAR1|375033|platelet endothelial aggregation receptor 1##AK292342|LRRC71|149499|leucine rich repeat containing 71##NM_144702|LRRC71|149499|leucine rich repeat containing 71##BC033790|LRRC71|149499|leucine rich repeat containing 71##BC057394|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_014784|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_198236|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11	0.998069	CTCF.p2:2:0.998
chr2	71276908	71277029	reg1006607.p1	11.818	+	TSC_hg19_v1_chr2_-_71222002 NM_144582	-54964	-	AK303594 TSC_hg19_v1_chr2_-_71221955 AY358783	-55008	-	BC128461 BC128462 TSC_hg19_v1_chr2_-_71221953	-55016	-	NM_017567 TSC_hg19_v1_chr2_+_71295427	18449	+	TSC_hg19_v1_chr2_+_71295436 AK297224	18474	+	TSC_hg19_v1_chr2_+_71295777 BC001029 BC005371 AK001812 AK097223 AK222645 BC036843 AJ242910 AB463914 CU674506 CU675147 DQ892674 DQ895916 CR457271	18781	+	NM_144582|TEX261|113419|testis expressed 261##AK303594|TEX261|113419|testis expressed 261##AY358783|TEX261|113419|testis expressed 261##BC128461|TEX261|113419|testis expressed 261##BC128462|TEX261|113419|testis expressed 261##NM_017567|NAGK|55577|N-acetylglucosamine kinase##AK297224|NAGK|55577|N-acetylglucosamine kinase##BC001029|NAGK|55577|N-acetylglucosamine kinase##BC005371|NAGK|55577|N-acetylglucosamine kinase##AK001812|NAGK|55577|N-acetylglucosamine kinase##AK097223|NAGK|55577|N-acetylglucosamine kinase##AK222645|NAGK|55577|N-acetylglucosamine kinase##BC036843|NAGK|55577|N-acetylglucosamine kinase##AJ242910|NAGK|55577|N-acetylglucosamine kinase##DQ892674|NAGK|55577|N-acetylglucosamine kinase##DQ895916|NAGK|55577|N-acetylglucosamine kinase##CR457271|NAGK|55577|N-acetylglucosamine kinase	0.757867	CTCF.p2:-7:0.758
chr11	62361130	62361255	reg1008042.p1	11.816	+	TSC_hg19_v1_chr11_-_62359020 BC110910 BC128263 AK074061 AK026000 AK292610 NM_022830	-2154	-	TSC_hg19_v1_chr11_+_62341675 AK125351	-19526	+	TSC_hg19_v1_chr11_-_62341364 NM_001404	-19789	-	TSC_hg19_v1_chr11_-_62368746 AK301569	7541	-	AF295807 AB527681 TSC_hg19_v1_chr11_-_62368932	7737	-	TSC_hg19_v1_chr11_-_62369137 BC023656 BC053650	7945	-	BC110910|TUT1|64852|terminal uridylyl transferase 1, U6 snRNA-specific##BC128263|TUT1|64852|terminal uridylyl transferase 1, U6 snRNA-specific##AK026000|TUT1|64852|terminal uridylyl transferase 1, U6 snRNA-specific##AK292610|TUT1|64852|terminal uridylyl transferase 1, U6 snRNA-specific##NM_022830|TUT1|64852|terminal uridylyl transferase 1, U6 snRNA-specific##NM_001404|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK301569|MTA2|9219|metastasis associated 1 family, member 2##AF295807|MTA2|9219|metastasis associated 1 family, member 2##BC023656|MTA2|9219|metastasis associated 1 family, member 2##BC053650|MTA2|9219|metastasis associated 1 family, member 2	0.974419	CTCF.p2:4:0.974
chr17	25930318	25930440	reg1009404.p1	11.816	+	BC035488 BC042106 NM_014238	-131350	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-309098	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-309257	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	27789	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	27824	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	27849	+	BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.990884	CTCF.p2:-10:0.991
chr5	79379464	79379592	reg1008004.p3	11.816	+	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-48364	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-92570	-	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-393856	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	172357	-	NM_032567 AK098575 AK314007 AF333098 BC033798	236287	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	324325	+	BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16	0.971197	CTCF.p2:2:0.971
chr1	156352871	156353006	reg1009585.p1	11.815	+	AF193807 AK290840 AK294641 AK303799 AK303814 AY139092 AY139093 NM_020407 AK308556 TSC_hg19_v1_chr1_+_156339022 AK054780 BC065218	-13917	+	TSC_hg19_v1_chr1_-_156308103 NM_001008800 NM_005998	-44786	-	TSC_hg19_v1_chr1_-_156308084 AL833197 AB208882 AK308023	-44862	-	NM_006365 U49857 BC059943 BC107686 BC050448 TSC_hg19_v1_chr1_-_156399219 AK095626 BC054045	46338	-	BC040949 TSC_hg19_v1_chr1_-_156460409	107465	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	117580	-	AF193807|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK290840|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK294641|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303799|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303814|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139092|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139093|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_020407|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK308556|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK054780|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##BC065218|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_001008800|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_005998|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AL833197|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AB208882|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK308023|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_006365|C1orf61|10485|chromosome 1 open reading frame 61##U49857|C1orf61|10485|chromosome 1 open reading frame 61##BC059943|C1orf61|10485|chromosome 1 open reading frame 61##BC107686|C1orf61|10485|chromosome 1 open reading frame 61##BC050448|C1orf61|10485|chromosome 1 open reading frame 61##AK095626|C1orf61|10485|chromosome 1 open reading frame 61##BC054045|C1orf61|10485|chromosome 1 open reading frame 61##BC040949|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D	0.977575	CTCF.p2:-2:0.978
chr2	71250798	71250924	reg1007567.p1	11.815	+	TSC_hg19_v1_chr2_-_71222002 NM_144582	-28857	-	AK303594 TSC_hg19_v1_chr2_-_71221955 AY358783	-28901	-	BC128461 BC128462 TSC_hg19_v1_chr2_-_71221953	-28909	-	NM_017567 TSC_hg19_v1_chr2_+_71295427	44556	+	TSC_hg19_v1_chr2_+_71295436 AK297224	44581	+	TSC_hg19_v1_chr2_+_71295777 BC001029 BC005371 AK001812 AK097223 AK222645 BC036843 AJ242910 AB463914 CU674506 CU675147 DQ892674 DQ895916 CR457271	44888	+	NM_144582|TEX261|113419|testis expressed 261##AK303594|TEX261|113419|testis expressed 261##AY358783|TEX261|113419|testis expressed 261##BC128461|TEX261|113419|testis expressed 261##BC128462|TEX261|113419|testis expressed 261##NM_017567|NAGK|55577|N-acetylglucosamine kinase##AK297224|NAGK|55577|N-acetylglucosamine kinase##BC001029|NAGK|55577|N-acetylglucosamine kinase##BC005371|NAGK|55577|N-acetylglucosamine kinase##AK001812|NAGK|55577|N-acetylglucosamine kinase##AK097223|NAGK|55577|N-acetylglucosamine kinase##AK222645|NAGK|55577|N-acetylglucosamine kinase##BC036843|NAGK|55577|N-acetylglucosamine kinase##AJ242910|NAGK|55577|N-acetylglucosamine kinase##DQ892674|NAGK|55577|N-acetylglucosamine kinase##DQ895916|NAGK|55577|N-acetylglucosamine kinase##CR457271|NAGK|55577|N-acetylglucosamine kinase	1.089942	CTCF.p2:-37:0.740	CTCF.p2:65:0.350
chr2	75280789	75280919	reg1008707.p1	11.815	+	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-95069	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-218603	-	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	-219594	+	AK289765 NM_001058 NM_015727	145774	-	BC016157 TSC_hg19_v1_chr2_-_75788066	507193	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	507236	-	NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2##AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A	0.983165	CTCF.p2:-11:0.983
chr3	187456716	187456845	reg1009430.p1	11.815	+	S67779 NM_001130845	-2515	-	EU139066 NM_001134738	-4099	-	BC068081 NM_001004312	-36436	-	BC142705 BC150184 Z21943 AK304325 AK308162 TSC_hg19_v1_chr3_-_187463257 BC146796	6464	-	U00115 NM_001706	6713	-	AL833171 TSC_hg19_v1_chr3_+_187870843	414047	+	S67779|BCL6|604|B-cell CLL/lymphoma 6##NM_001130845|BCL6|604|B-cell CLL/lymphoma 6##EU139066|BCL6|604|B-cell CLL/lymphoma 6##NM_001134738|BCL6|604|B-cell CLL/lymphoma 6##BC068081|RTP2|344892|receptor (chemosensory) transporter protein 2##NM_001004312|RTP2|344892|receptor (chemosensory) transporter protein 2##BC142705|BCL6|604|B-cell CLL/lymphoma 6##BC150184|BCL6|604|B-cell CLL/lymphoma 6##Z21943|BCL6|604|B-cell CLL/lymphoma 6##AK304325|BCL6|604|B-cell CLL/lymphoma 6##AK308162|BCL6|604|B-cell CLL/lymphoma 6##BC146796|BCL6|604|B-cell CLL/lymphoma 6##U00115|BCL6|604|B-cell CLL/lymphoma 6##NM_001706|BCL6|604|B-cell CLL/lymphoma 6##AL833171|LPP|4026|LIM domain containing preferred translocation partner in lipoma	0.0	
chr8	117863499	117863642	reg1009432.p1	11.815	+	TSC_hg19_v1_chr8_+_117778793 AK055279 AK315770	-84776	+	BC005955 BC022441 NM_032334 TSC_hg19_v1_chr8_+_117778752	-84819	+	AK222520 TSC_hg19_v1_chr8_-_117768063 AK296162 NM_003756	-95499	-	AK289505 BC050381 TSC_hg19_v1_chr8_-_117887011 D38551	23377	-	TSC_hg19_v1_chr8_-_117887068 NM_006265	23512	-	BC140924 BC142621 NM_001025357 AB463771 AB181519	86889	+	AK055279|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##AK315770|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC005955|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC022441|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##NM_032334|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##AK222520|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK296162|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##NM_003756|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK289505|RAD21|5885|RAD21 homolog (S. pombe)##BC050381|RAD21|5885|RAD21 homolog (S. pombe)##D38551|RAD21|5885|RAD21 homolog (S. pombe)##NM_006265|RAD21|5885|RAD21 homolog (S. pombe)##BC140924|C8orf85|441376|chromosome 8 open reading frame 85##BC142621|C8orf85|441376|chromosome 8 open reading frame 85##NM_001025357|C8orf85|441376|chromosome 8 open reading frame 85##AB181519|C8orf85|441376|chromosome 8 open reading frame 85	0.999166	CTCF.p2:9:0.999
chr1	236272819	236272953	reg1006410.p1	11.813	+	TSC_hg19_v1_chr1_-_236228670 BC012501	-44146	-	TSC_hg19_v1_chr1_-_236228496 AK297234	-44388	-	TSC_hg19_v1_chr1_-_236228477 NM_002508	-44408	-	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	32990	+	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	172302	-	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	172430	-	BC012501|NID1|4811|nidogen 1##AK297234|NID1|4811|nidogen 1##NM_002508|NID1|4811|nidogen 1##BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)	0.998001	CTCF.p2:-24:0.998
chr2	118804361	118804474	reg1006268.p1	11.813	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-32684	-	TSC_hg19_v1_chr2_-_118771677 BC028609	-32733	-	AM393188 AM393503 AM393699 AB384355 AK057926 TSC_hg19_v1_chr2_-_118771647 BC093018 AK290722 AK309040 BC012052 AB209993	-32803	-	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	41646	+	NM_001426	801341	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	895403	+	NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC028609|CCDC93|54520|coiled-coil domain containing 93##AM393188|CCDC93|54520|coiled-coil domain containing 93##AM393503|CCDC93|54520|coiled-coil domain containing 93##AM393699|CCDC93|54520|coiled-coil domain containing 93##AK057926|CCDC93|54520|coiled-coil domain containing 93##BC093018|CCDC93|54520|coiled-coil domain containing 93##AK290722|CCDC93|54520|coiled-coil domain containing 93##AK309040|CCDC93|54520|coiled-coil domain containing 93##BC012052|CCDC93|54520|coiled-coil domain containing 93##AB209993|CCDC93|54520|coiled-coil domain containing 93##AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_001426|EN1|2019|engrailed homeobox 1##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure	0.1506	
chr8	30413467	30413600	reg1008860.p1	11.813	+	NM_001008710 NM_001008711 NM_001008712 NM_006867 AK304858 D84107 D84108 D84109 D84110 TSC_hg19_v1_chr8_+_30242056 BC003608	-171524	+	Z36874 TSC_hg19_v1_chr8_+_30209759	-203796	+	D84145 NM_006571 TSC_hg19_v1_chr8_+_30013882 AK314128 BC013175 CR456851	-399678	+	NM_001206847	82583	+	S67861 TSC_hg19_v1_chr8_-_30515718 X63469 BC030572 BC001775 NM_002095	102203	-	BC035691 TSC_hg19_v1_chr8_-_30585320 X15722 AB519179 AB519180 AB519181 AF228704 CU686724	171753	-	NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing##NM_006867|RBPMS|11030|RNA binding protein with multiple splicing##AK304858|RBPMS|11030|RNA binding protein with multiple splicing##D84107|RBPMS|11030|RNA binding protein with multiple splicing##D84108|RBPMS|11030|RNA binding protein with multiple splicing##D84109|RBPMS|11030|RNA binding protein with multiple splicing##D84110|RBPMS|11030|RNA binding protein with multiple splicing##BC003608|RBPMS|11030|RNA binding protein with multiple splicing##D84145|DCTN6|10671|dynactin 6##NM_006571|DCTN6|10671|dynactin 6##AK314128|DCTN6|10671|dynactin 6##BC013175|DCTN6|10671|dynactin 6##CR456851|DCTN6|10671|dynactin 6##NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341##S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC035691|GSR|2936|glutathione reductase##X15722|GSR|2936|glutathione reductase##AB519179|GSR|2936|glutathione reductase##AB519180|GSR|2936|glutathione reductase##AB519181|GSR|2936|glutathione reductase##AF228704|GSR|2936|glutathione reductase	0.999159	CTCF.p2:9:0.999
chr12	50449857	50449989	reg1006853.p1	11.812	+	BC024144 AB030251 TSC_hg19_v1_chr12_-_50419242 AK000733 AL136794 BC032754 AK315785 NM_001126103 NM_001126104 NM_013277	-30690	-	NM_001652 U48408	-83304	+	NM_001651	-94645	+	NM_001095 NM_020039 U78180 U78181 BC028722 AK290010	1638	+	TSC_hg19_v1_chr12_+_50479018 NM_003076 NM_139071 U66617 BC009368	29064	+	TSC_hg19_v1_chr12_+_50479124 AK292700 AK293932 AK130517 AB527887 CU679327 EU447009 BC000063 AF109733	29190	+	BC024144|RACGAP1|29127|Rac GTPase activating protein 1##AB030251|RACGAP1|29127|Rac GTPase activating protein 1##AK000733|RACGAP1|29127|Rac GTPase activating protein 1##AL136794|RACGAP1|29127|Rac GTPase activating protein 1##BC032754|RACGAP1|29127|Rac GTPase activating protein 1##AK315785|RACGAP1|29127|Rac GTPase activating protein 1##NM_001126103|RACGAP1|29127|Rac GTPase activating protein 1##NM_001126104|RACGAP1|29127|Rac GTPase activating protein 1##NM_013277|RACGAP1|29127|Rac GTPase activating protein 1##NM_001652|AQP6|363|aquaporin 6, kidney specific##U48408|AQP6|363|aquaporin 6, kidney specific##NM_001651|AQP5|362|aquaporin 5##NM_001095|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##NM_020039|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78180|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78181|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##BC028722|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##AK290010|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	0.958345	CTCF.p2:25:0.958
chr16	80561341	80561469	reg1007878.p3	11.812	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-926790	-	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-2427950	+	NM_001244755	-2498420	+	AF125108 NM_130897 BC054892 BC035232	13483	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	276642	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	478679	+	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N	0.956739	CTCF.p2:-20:0.957
chr18	20938936	20939040	reg1005835.p2	11.812	+	BC037218 NM_138375	-203200	+	EF028204 NM_001100619	-223262	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-425173	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	78883	-	AK057292 NM_003831	93798	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	94258	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.083217	
chr5	133922577	133922713	reg1006749.p1	11.812	+	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	-60840	+	TSC_hg19_v1_chr5_+_133861359 AK056471 BC021962 AK292635 AK074123	-61282	+	TSC_hg19_v1_chr5_+_133842276 BC032795	-80355	+	BC002847 TSC_hg19_v1_chr5_-_133968519 AK223452 AF092130 BC093034 NM_001033503 NM_016103	45852	-	TSC_hg19_v1_chr5_+_133984493 AK304060 NM_001252231 NM_021982 BC019341	61786	+	TSC_hg19_v1_chr5_+_134074237 NM_001745 BC130325 AK313156 BC063532 U18242 AB590695 HQ258172 AF068179	151665	+	D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15##AK056471|PHF15|23338|PHD finger protein 15##BC021962|PHF15|23338|PHD finger protein 15##AK292635|PHF15|23338|PHD finger protein 15##AK074123|PHF15|23338|PHD finger protein 15##BC002847|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK223452|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AF092130|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##BC093034|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_001033503|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_016103|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001252231|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001745|CAMLG|819|calcium modulating ligand##BC130325|CAMLG|819|calcium modulating ligand##AK313156|CAMLG|819|calcium modulating ligand##BC063532|CAMLG|819|calcium modulating ligand##U18242|CAMLG|819|calcium modulating ligand##HQ258172|CAMLG|819|calcium modulating ligand##AF068179|CAMLG|819|calcium modulating ligand	0.946081	CTCF.p2:5:0.946
chr1	241051464	241051603	reg1010011.p1	11.811	+	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	-276079	-	BC046632 TSC_hg19_v1_chr1_-_240775431	-276124	-	TSC_hg19_v1_chr1_+_240255182 NM_020066	-796356	+	AF090116 AK314862 TSC_hg19_v1_chr1_-_241520451	468885	-	TSC_hg19_v1_chr1_-_241520469 BC022009 NM_002924	468939	-	TSC_hg19_v1_chr1_-_241683023 BT009839 AB590519 EU176358 BC017444 BC003108 U48857 U59309	631499	-	AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2##BC046632|GREM2|64388|gremlin 2##NM_020066|FMN2|56776|formin 2##AF090116|RGS7|6000|regulator of G-protein signaling 7##AK314862|RGS7|6000|regulator of G-protein signaling 7##BC022009|RGS7|6000|regulator of G-protein signaling 7##NM_002924|RGS7|6000|regulator of G-protein signaling 7##BT009839|FH|2271|fumarate hydratase##EU176358|FH|2271|fumarate hydratase##BC017444|FH|2271|fumarate hydratase##BC003108|FH|2271|fumarate hydratase##U48857|FH|2271|fumarate hydratase##U59309|FH|2271|fumarate hydratase	1.009366	CTCF.p2:-11:0.997
chr17	25659973	25660095	reg1007115.p2	11.811	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-38753	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-38912	+	NM_001190452	-3637598	+	BC035488 BC042106 NM_014238	138995	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	298134	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	298169	+	AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.993597	CTCF.p2:13:0.994
chr1	79073134	79073260	reg1007123.p1	11.811	+	NM_000959 NM_001039585 AK292845 AK312816 AY485530 L24470 BC112965 AF004021	-116413	+	TSC_hg19_v1_chr1_+_78511749 AK225941 AB073737 AB528004 CU690284	-561435	+	BC036075 NM_017655 TSC_hg19_v1_chr1_+_78511713	-561534	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	12934	+	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	42301	+	BC025721 AY358360 AK292894 AK313738 NM_022159	399230	-	NM_000959|PTGFR|5737|prostaglandin F receptor (FP)##NM_001039585|PTGFR|5737|prostaglandin F receptor (FP)##AK292845|PTGFR|5737|prostaglandin F receptor (FP)##AK312816|PTGFR|5737|prostaglandin F receptor (FP)##AY485530|PTGFR|5737|prostaglandin F receptor (FP)##L24470|PTGFR|5737|prostaglandin F receptor (FP)##BC112965|PTGFR|5737|prostaglandin F receptor (FP)##AF004021|PTGFR|5737|prostaglandin F receptor (FP)##AK225941|GIPC2|54810|GIPC PDZ domain containing family, member 2##AB073737|GIPC2|54810|GIPC PDZ domain containing family, member 2##BC036075|GIPC2|54810|GIPC PDZ domain containing family, member 2##NM_017655|GIPC2|54810|GIPC PDZ domain containing family, member 2##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	0.775189	CTCF.p2:16:0.775
chr20	13086632	13086746	reg1007322.p1	11.811	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	-97048	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-1188132	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	-1215240	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	115734	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	532875	-	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	678852	-	BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)	0.999097	CTCF.p2:0:0.999
chr15	40094225	40094339	reg1006595.p1	11.809	+	AK091251 TSC_hg19_v1_chr15_+_40075106	-19176	+	AK093308 AX748045 BC045191 NM_152597	-19254	-	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	-220953	+	CU688250 TSC_hg19_v1_chr15_-_40212342	118003	-	BC067106 TSC_hg19_v1_chr15_-_40212465	118206	-	TSC_hg19_v1_chr15_-_40213138 D38449 NM_007223	118845	-	AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##BC067106|GPR176|11245|G protein-coupled receptor 176##D38449|GPR176|11245|G protein-coupled receptor 176##NM_007223|GPR176|11245|G protein-coupled receptor 176	0.25243	CTCF.p2:-8:0.252
chr20	11185921	11186059	reg1009009.p1	11.809	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-531421	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	-531786	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-770014	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	685459	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	712567	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	1803651	+	BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3	0.246919	CTCF.p2:1:0.247
chr9	101761267	101761390	reg1007472.p1	11.809	+	TSC_hg19_v1_chr9_+_101706027 AK308438 NM_001855 AK095885 L25286 D21230	-55345	+	TSC_hg19_v1_chr9_+_101569953 AB527376 AB040673 AB078146 AJ132365 NM_024642	-191338	+	CR749467 TSC_hg19_v1_chr9_-_101558801 NM_173551	-202677	-	TSC_hg19_v1_chr9_+_101867370 AK302059	106043	+	BC071181 TSC_hg19_v1_chr9_+_101867394	106065	+	TSC_hg19_v1_chr9_+_101867401 AJ619019 L11695 NM_001130916 NM_004612	106080	+	AK308438|COL15A1|1306|collagen, type XV, alpha 1##NM_001855|COL15A1|1306|collagen, type XV, alpha 1##AK095885|COL15A1|1306|collagen, type XV, alpha 1##L25286|COL15A1|1306|collagen, type XV, alpha 1##D21230|COL15A1|1306|collagen, type XV, alpha 1##AB040673|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AB078146|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AJ132365|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##NM_024642|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##CR749467|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##NM_173551|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##AK302059|TGFBR1|7046|transforming growth factor, beta receptor 1##BC071181|TGFBR1|7046|transforming growth factor, beta receptor 1##AJ619019|TGFBR1|7046|transforming growth factor, beta receptor 1##L11695|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_001130916|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_004612|TGFBR1|7046|transforming growth factor, beta receptor 1	0.997982	CTCF.p2:0:0.998
chr2	69534613	69534737	reg1007575.p2	11.808	+	TSC_hg19_v1_chr2_+_69240310 NM_018153 NM_032208 NM_053034 AF279145 AK001463 AY928974 AY928975 AY928976 AY928977 AK223273 BC012074 AK309553 AF421380 AK292113 CU680200 EU832615 EU832687	-294292	+	AB039886 AJ966789 NM_019617 AB590637 AY139184 AK098489 AY456961 BC059778 AY359050	-332933	+	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	-354619	-	TSC_hg19_v1_chr2_-_69614353 M90516 BC045641 NM_001244710 NM_002056	79730	-	AJ132584 AF132967 AB528729 HQ258750 TSC_hg19_v1_chr2_-_69664568 AK300700 AK308567	129898	-	TSC_hg19_v1_chr2_-_69664606 AY286306 AY286307 BX538347	129939	-	NM_018153|ANTXR1|84168|anthrax toxin receptor 1##NM_032208|ANTXR1|84168|anthrax toxin receptor 1##NM_053034|ANTXR1|84168|anthrax toxin receptor 1##AF279145|ANTXR1|84168|anthrax toxin receptor 1##AK001463|ANTXR1|84168|anthrax toxin receptor 1##AK223273|ANTXR1|84168|anthrax toxin receptor 1##BC012074|ANTXR1|84168|anthrax toxin receptor 1##AK309553|ANTXR1|84168|anthrax toxin receptor 1##AF421380|ANTXR1|84168|anthrax toxin receptor 1##AK292113|ANTXR1|84168|anthrax toxin receptor 1##EU832615|ANTXR1|84168|anthrax toxin receptor 1##EU832687|ANTXR1|84168|anthrax toxin receptor 1##AB039886|GKN1|56287|gastrokine 1##AJ966789|GKN1|56287|gastrokine 1##NM_019617|GKN1|56287|gastrokine 1##AY139184|GKN1|56287|gastrokine 1##AK098489|GKN1|56287|gastrokine 1##AY456961|GKN1|56287|gastrokine 1##BC059778|GKN1|56287|gastrokine 1##AY359050|GKN1|56287|gastrokine 1##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2##M90516|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##BC045641|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_001244710|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_002056|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##AJ132584|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AF132967|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##HQ258750|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK300700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK308567|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286306|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286307|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BX538347|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	0.711058	CTCF.p2:14:0.711
chr4	157299411	157299478	reg1006980.p2	11.807	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	-424396	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	-474567	+	AB528059 AJ252011 NM_017419	-512044	-	AB590688 BC051876 BC094746 AF260738 AK300480 AF244813 AK313817 BC041783 BC065490 TSC_hg19_v1_chr4_-_157892334 AM922296 AB033831	592773	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	593034	-	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	593115	-	BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##BC051876|PDGFC|56034|platelet derived growth factor C##BC094746|PDGFC|56034|platelet derived growth factor C##AF260738|PDGFC|56034|platelet derived growth factor C##AK300480|PDGFC|56034|platelet derived growth factor C##AF244813|PDGFC|56034|platelet derived growth factor C##AK313817|PDGFC|56034|platelet derived growth factor C##BC041783|PDGFC|56034|platelet derived growth factor C##AM922296|PDGFC|56034|platelet derived growth factor C##AB033831|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C	0.339614	CTCF.p2:6:0.340
chr3	59197993	59198120	reg1005397.p1	11.806	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-162296	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-162315	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-162348	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	2039034	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	2349155	+	BC047734 TSC_hg19_v1_chr3_+_61547294	2349230	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.280497	CTCF.p2:-6:0.280
chr4	74531796	74531919	reg1009615.p1	11.805	+	AY217664 BC058835 NM_177532 AY217665 CR749283 AK126346 NM_201431	-45638	-	AK290556 NM_001133 BC109020 BC109021 L35486	-184387	+	NM_001134 V01514 AK297669 TSC_hg19_v1_chr4_+_74301937 AK297674 AK314817 BC027881 DQ890942 DQ894103 CU693306	-229902	+	NM_000584 Y00787 AK131067 AK311874 M17017 M26383 BC013615 AF043337 AB590232 DQ890564 DQ893727 BT007067 CR542151 Z11686	74441	+	NM_002993 AK311981 U81234 BC013744 DQ891500 DQ894692 AB463491	170512	+	NM_002620 BC130653 BC130657 HQ258042	187186	+	AY217664|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##BC058835|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_177532|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AY217665|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##CR749283|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK126346|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_201431|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK290556|AFM|173|afamin##NM_001133|AFM|173|afamin##BC109020|AFM|173|afamin##BC109021|AFM|173|afamin##L35486|AFM|173|afamin##NM_001134|AFP|174|alpha-fetoprotein##V01514|AFP|174|alpha-fetoprotein##AK297669|AFP|174|alpha-fetoprotein##AK297674|AFP|174|alpha-fetoprotein##AK314817|AFP|174|alpha-fetoprotein##BC027881|AFP|174|alpha-fetoprotein##DQ890942|AFP|174|alpha-fetoprotein##DQ894103|AFP|174|alpha-fetoprotein##NM_000584|IL8|3576|interleukin 8##Y00787|IL8|3576|interleukin 8##AK131067|IL8|3576|interleukin 8##AK311874|IL8|3576|interleukin 8##M17017|IL8|3576|interleukin 8##M26383|IL8|3576|interleukin 8##BC013615|IL8|3576|interleukin 8##DQ890564|IL8|3576|interleukin 8##DQ893727|IL8|3576|interleukin 8##BT007067|IL8|3576|interleukin 8##CR542151|IL8|3576|interleukin 8##Z11686|IL8|3576|interleukin 8##NM_002993|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##AK311981|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##U81234|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##BC013744|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ891500|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ894692|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##NM_002620|PF4V1|5197|platelet factor 4 variant 1##BC130653|PF4V1|5197|platelet factor 4 variant 1##BC130657|PF4V1|5197|platelet factor 4 variant 1##HQ258042|PF4V1|5197|platelet factor 4 variant 1	0.694154	CTCF.p2:0:0.694
chrX	114987344	114987497	reg1006545.p1	11.805	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-159552	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-190378	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-191814	+	BC003645 TSC_hg19_v1_chrX_-_115085443	98019	-	AK313927 NM_000686 X87723 U16957	314575	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	580347	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:22:0.429
chr11	93917076	93917202	reg1006288.p1	11.804	+	TSC_hg19_v1_chr11_+_93862307 AY359023 FM201789	-54819	+	AK074897 TSC_hg19_v1_chr11_+_93862143 AF093239	-54988	+	TSC_hg19_v1_chr11_+_93862126 BC016931 NM_015368 AF398509 AK313074	-55044	+	NM_001199206	121663	+	TSC_hg19_v1_chr11_-_94134589 AK315161 NM_016540	217443	-	U37359 TSC_hg19_v1_chr11_-_94227011 BC017823 BC005241 AK095388 AF022778 AK308318 NM_005590 NM_005591	309834	-	AY359023|PANX1|24145|pannexin 1##FM201789|PANX1|24145|pannexin 1##AK074897|PANX1|24145|pannexin 1##AF093239|PANX1|24145|pannexin 1##BC016931|PANX1|24145|pannexin 1##NM_015368|PANX1|24145|pannexin 1##AF398509|PANX1|24145|pannexin 1##AK313074|PANX1|24145|pannexin 1##NM_001199206|FOLR4|390243|folate receptor 4 (delta) homolog (mouse)##AK315161|GPR83|10888|G protein-coupled receptor 83##NM_016540|GPR83|10888|G protein-coupled receptor 83##U37359|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC017823|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC005241|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK095388|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AF022778|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK308318|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005590|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005591|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)	0.0	
chr19	47494525	47494658	reg1009835.p1	11.804	+	AB051509 AF159851 BC131565 BC150257 NM_004491	-72659	+	BC006337 TSC_hg19_v1_chr19_-_47354069 AK312003 NM_004069 NM_021575	-140460	-	AF105230 TSC_hg19_v1_chr19_-_47291850 AB209738 AF105423 NM_005628 U53347 AK292690	-202869	-	TSC_hg19_v1_chr19_+_47523068 BC039016	28485	+	AB054002 NM_002517 U77968	29620	+	AK000519 NM_017854 TSC_hg19_v1_chr19_-_47551883 BC002907	57305	-	AB051509|ARHGAP35|2909|Rho GTPase activating protein 35##AF159851|ARHGAP35|2909|Rho GTPase activating protein 35##BC131565|ARHGAP35|2909|Rho GTPase activating protein 35##BC150257|ARHGAP35|2909|Rho GTPase activating protein 35##NM_004491|ARHGAP35|2909|Rho GTPase activating protein 35##BC006337|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##AK312003|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##NM_004069|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##NM_021575|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##AF105230|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AB209738|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF105423|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_005628|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##U53347|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK292690|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC039016|NPAS1|4861|neuronal PAS domain protein 1##AB054002|NPAS1|4861|neuronal PAS domain protein 1##NM_002517|NPAS1|4861|neuronal PAS domain protein 1##U77968|NPAS1|4861|neuronal PAS domain protein 1##AK000519|TMEM160|54958|transmembrane protein 160##NM_017854|TMEM160|54958|transmembrane protein 160##BC002907|TMEM160|54958|transmembrane protein 160	0.967579	CTCF.p2:2:0.968
chr19	9900925	9901048	reg1009411.p1	11.804	+	BC037359 TSC_hg19_v1_chr19_-_9879296 AK308938 AK289536 AK097652 NM_001077624	-21661	-	AK296815 NM_001199814	-89515	-	TSC_hg19_v1_chr19_-_9785777 AK300115 AK297446 AK303038 AK304370 NM_001130031 NM_001130032 NM_017656	-115218	-	CU674772 TSC_hg19_v1_chr19_-_9929496	28506	-	TSC_hg19_v1_chr19_-_9929504 BX647073	28526	-	BC001586 AK000195 NM_017703 TSC_hg19_v1_chr19_-_9929754 AK093760 AK027004	28739	-	BC037359|ZNF846|162993|zinc finger protein 846##AK308938|ZNF846|162993|zinc finger protein 846##AK097652|ZNF846|162993|zinc finger protein 846##NM_001077624|ZNF846|162993|zinc finger protein 846##AK296815|ZNF812|729648|zinc finger protein 812##NM_001199814|ZNF812|729648|zinc finger protein 812##AK300115|ZNF562|54811|zinc finger protein 562##AK297446|ZNF562|54811|zinc finger protein 562##AK303038|ZNF562|54811|zinc finger protein 562##AK304370|ZNF562|54811|zinc finger protein 562##NM_001130031|ZNF562|54811|zinc finger protein 562##NM_001130032|ZNF562|54811|zinc finger protein 562##NM_017656|ZNF562|54811|zinc finger protein 562##BX647073|FBXL12|54850|F-box and leucine-rich repeat protein 12##BC001586|FBXL12|54850|F-box and leucine-rich repeat protein 12##AK000195|FBXL12|54850|F-box and leucine-rich repeat protein 12##NM_017703|FBXL12|54850|F-box and leucine-rich repeat protein 12##AK093760|FBXL12|54850|F-box and leucine-rich repeat protein 12##AK027004|FBXL12|54850|F-box and leucine-rich repeat protein 12	0.718249	CTCF.p2:6:0.718
chrUn_gl000242	33679	33802	reg1008538.p1	11.804	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.99935	CTCF.p2:5:0.999
chrX	130868774	130868922	reg1007744.p2	11.804	+	BC137050 AB529233 NM_001004486	-190850	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-445436	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-445586	-	TSC_hg19_v1_chrX_-_130964633 AK097911	95803	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	288473	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	288792	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.159456	
chr11	5829780	5829916	reg1008462.p1	11.803	+	NM_001001913	-19803	-	BC136979 BC136981 NM_001001922	-29952	-	BC137035 BC137036 NM_001005175	-53926	+	BC140732 NM_001005174	11706	+	NM_001005167	33278	-	NM_001005168 BC137030 BC137041	49099	-	NM_001001913|OR52N1|79473|olfactory receptor, family 52, subfamily N, member 1##BC136979|OR52N5|390075|olfactory receptor, family 52, subfamily N, member 5##BC136981|OR52N5|390075|olfactory receptor, family 52, subfamily N, member 5##NM_001001922|OR52N5|390075|olfactory receptor, family 52, subfamily N, member 5##BC137035|OR52N4|390072|olfactory receptor, family 52, subfamily N, member 4##BC137036|OR52N4|390072|olfactory receptor, family 52, subfamily N, member 4##NM_001005175|OR52N4|390072|olfactory receptor, family 52, subfamily N, member 4##BC140732|OR52N2|390077|olfactory receptor, family 52, subfamily N, member 2##NM_001005174|OR52N2|390077|olfactory receptor, family 52, subfamily N, member 2##NM_001005167|OR52E6|390078|olfactory receptor, family 52, subfamily E, member 6##NM_001005168|OR52E8|390079|olfactory receptor, family 52, subfamily E, member 8##BC137030|OR52E8|390079|olfactory receptor, family 52, subfamily E, member 8##BC137041|OR52E8|390079|olfactory receptor, family 52, subfamily E, member 8	0.868423	CTCF.p2:8:0.868
chr15	74666101	74666251	reg1007120.p2	11.803	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-6173	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-7641	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-55271	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	59853	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	60136	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	87271	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.987991	CTCF.p2:-16:0.988
chrX	123094283	123094389	reg1002963.p1	11.803	+	TSC_hg19_v1_chrX_+_122993844 AK313883 NM_001204401 NM_001167 AK309704 U32974 BC032729	-100394	+	TSC_hg19_v1_chrX_-_122866897 NM_001081550	-227439	-	TSC_hg19_v1_chrX_-_122866885 AK001758	-227453	-	TSC_hg19_v1_chrX_+_123094397 NM_001042749 AK098737 BX640970 AK298633 AK313559	188	+	NM_001042750 NM_001042751 NM_006603 TSC_hg19_v1_chrX_+_123095573 AL831939 BX641002 CR749433 BX641003	1237	+	TSC_hg19_v1_chrX_+_123095638 BC001765	1301	+	AK313883|XIAP|331|X-linked inhibitor of apoptosis##NM_001204401|XIAP|331|X-linked inhibitor of apoptosis##NM_001167|XIAP|331|X-linked inhibitor of apoptosis##AK309704|XIAP|331|X-linked inhibitor of apoptosis##U32974|XIAP|331|X-linked inhibitor of apoptosis##BC032729|XIAP|331|X-linked inhibitor of apoptosis##NM_001081550|THOC2|57187|THO complex 2##AK001758|THOC2|57187|THO complex 2##NM_001042749|STAG2|10735|stromal antigen 2##AK098737|STAG2|10735|stromal antigen 2##BX640970|STAG2|10735|stromal antigen 2##AK298633|STAG2|10735|stromal antigen 2##AK313559|STAG2|10735|stromal antigen 2##NM_001042750|STAG2|10735|stromal antigen 2##NM_001042751|STAG2|10735|stromal antigen 2##NM_006603|STAG2|10735|stromal antigen 2##AL831939|STAG2|10735|stromal antigen 2##BX641002|STAG2|10735|stromal antigen 2##CR749433|STAG2|10735|stromal antigen 2##BX641003|STAG2|10735|stromal antigen 2##BC001765|STAG2|10735|stromal antigen 2	0.857966	CTCF.p2:-4:0.399	CTCF.p2:43:0.459
chr15	35581364	35581485	reg1007264.p1	11.802	+	NM_014106 TSC_hg19_v1_chr15_-_35280498	-300912	-	TSC_hg19_v1_chr15_-_35280489 BC071603 AK291438	-300970	-	AB384497 AK291615 BC127111 BC127112 TSC_hg19_v1_chr15_-_35261899 AB011132 AK315815 BX647820 EF553519 NM_014691	-319497	-	CU688170 TSC_hg19_v1_chr15_-_35838365 BC066652 AK094007 AL833427 AX748407 AK125017 NM_001141972 NM_080650	256962	-	TSC_hg19_v1_chr15_+_36871914 NM_001130010 AK026504 BC006254	1290475	+	NM_032499	1351381	+	NM_014106|ZNF770|54989|zinc finger protein 770##BC071603|ZNF770|54989|zinc finger protein 770##AK291438|ZNF770|54989|zinc finger protein 770##AK291615|AQR|9716|aquarius homolog (mouse)##BC127111|AQR|9716|aquarius homolog (mouse)##BC127112|AQR|9716|aquarius homolog (mouse)##AB011132|AQR|9716|aquarius homolog (mouse)##AK315815|AQR|9716|aquarius homolog (mouse)##BX647820|AQR|9716|aquarius homolog (mouse)##EF553519|AQR|9716|aquarius homolog (mouse)##NM_014691|AQR|9716|aquarius homolog (mouse)##BC066652|ATPBD4|89978|ATP binding domain 4##AK094007|ATPBD4|89978|ATP binding domain 4##AL833427|ATPBD4|89978|ATP binding domain 4##AK125017|ATPBD4|89978|ATP binding domain 4##NM_001141972|ATPBD4|89978|ATP binding domain 4##NM_080650|ATPBD4|89978|ATP binding domain 4##NM_001130010|C15orf41|84529|chromosome 15 open reading frame 41##AK026504|C15orf41|84529|chromosome 15 open reading frame 41##BC006254|C15orf41|84529|chromosome 15 open reading frame 41##NM_032499|C15orf41|84529|chromosome 15 open reading frame 41	0.781241	CTCF.p2:-7:0.781
chr17	53795624	53795749	reg1008577.p1	11.802	+	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	-296431	-	TSC_hg19_v1_chr17_+_53344967 AK295726 AK074289	-450700	+	AK290043 TSC_hg19_v1_chr17_+_53343204	-452499	+	BC010128 AK001832 NM_018286	4463	-	AK095175 NM_001099640	13776	-	NM_021213 TSC_hg19_v1_chr17_+_53828339 AF087857 AF151638	32689	+	CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##AK295726|HLF|3131|hepatic leukemia factor##AK074289|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100##NM_021213|PCTP|58488|phosphatidylcholine transfer protein##AF087857|PCTP|58488|phosphatidylcholine transfer protein##AF151638|PCTP|58488|phosphatidylcholine transfer protein	0.987909	CTCF.p2:4:0.988
chr8	101873965	101874093	reg1007537.p1	11.802	+	BC041863 TSC_hg19_v1_chr8_-_101734972	-139063	-	Y00345 TSC_hg19_v1_chr8_-_101734316 AK130523 AK303120 NM_002568	-139712	-	BC015958 BC023217 BC023520 TSC_hg19_v1_chr8_-_101734301	-139734	-	TSC_hg19_v1_chr8_-_101936525 DQ185048	62495	-	TSC_hg19_v1_chr8_-_101962797 NM_001135702	88770	-	TSC_hg19_v1_chr8_-_101963538 NM_001135700 NM_001135701	89433	-	BC041863|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##Y00345|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK130523|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK303120|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##NM_002568|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC015958|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023217|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023520|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ185048|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135702|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135700|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135701|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	0.013496	
chr1	162025891	162026014	reg1006557.p1	11.801	+	AK316154 BC067274 NM_015441 TSC_hg19_v1_chr1_-_161993687	-32316	-	TSC_hg19_v1_chr1_+_161736145 BC014969 BC071997 AB208929 CU677145	-289816	+	AF005887 AK290498 TSC_hg19_v1_chr1_+_161736109	-289842	+	TSC_hg19_v1_chr1_+_162039485 BC041382 AB007933 NM_001164757 NM_014697	13572	+	AY841899 NM_001126060	306820	+	AB463503 CU689584 AY248900 BC032957 NM_182581	320659	-	AK316154|OLFML2B|25903|olfactomedin-like 2B##BC067274|OLFML2B|25903|olfactomedin-like 2B##NM_015441|OLFML2B|25903|olfactomedin-like 2B##BC014969|ATF6|22926|activating transcription factor 6##BC071997|ATF6|22926|activating transcription factor 6##AB208929|ATF6|22926|activating transcription factor 6##AF005887|ATF6|22926|activating transcription factor 6##AK290498|ATF6|22926|activating transcription factor 6##BC041382|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AB007933|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_001164757|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_014697|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AY841899|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_001126060|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AY248900|C1orf111|284680|chromosome 1 open reading frame 111##BC032957|C1orf111|284680|chromosome 1 open reading frame 111##NM_182581|C1orf111|284680|chromosome 1 open reading frame 111	0.906743	CTCF.p2:-9:0.907
chr17	18720205	18720347	reg1008572.p1	11.801	+	TSC_hg19_v1_chr17_+_18684595 BC008430 NM_016078 AK290813 BX537929 BX648167	-35674	+	NM_031456 BC028364 AK310383 AL136822	-72920	+	AK301647 DQ232882 NM_001037330 AK316368 AK301639 AK298836 BC146902 BC146907	-94860	+	NM_001243936 NM_001243942 TSC_hg19_v1_chr17_+_18759671 BX648850 AK303911	39365	+	NM_001243941 NM_002767 TSC_hg19_v1_chr17_+_18761443 AK313087	41136	+	TSC_hg19_v1_chr17_+_18761445 BC106050 AK304544	41194	+	BC008430|FAM18B1|51030|family with sequence similarity 18, member B1##NM_016078|FAM18B1|51030|family with sequence similarity 18, member B1##AK290813|FAM18B1|51030|family with sequence similarity 18, member B1##BX537929|FAM18B1|51030|family with sequence similarity 18, member B1##BX648167|FAM18B1|51030|family with sequence similarity 18, member B1##NM_031456|FBXW10|10517|F-box and WD repeat domain containing 10##BC028364|FBXW10|10517|F-box and WD repeat domain containing 10##AK310383|FBXW10|10517|F-box and WD repeat domain containing 10##AL136822|FBXW10|10517|F-box and WD repeat domain containing 10##AK301647|TRIM16L|147166|tripartite motif containing 16-like##DQ232882|TRIM16L|147166|tripartite motif containing 16-like##NM_001037330|TRIM16L|147166|tripartite motif containing 16-like##AK316368|TRIM16L|147166|tripartite motif containing 16-like##AK301639|TRIM16L|147166|tripartite motif containing 16-like##AK298836|TRIM16L|147166|tripartite motif containing 16-like##BC146902|TRIM16L|147166|tripartite motif containing 16-like##BC146907|TRIM16L|147166|tripartite motif containing 16-like##NM_001243936|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##NM_001243942|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BX648850|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK303911|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##NM_001243941|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##NM_002767|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK313087|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC106050|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK304544|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	0.92735	CTCF.p2:-3:0.927
chr19	8477865	8478003	reg1008002.p1	11.801	+	TSC_hg19_v1_chr19_-_8455589 BC014506	-22362	-	TSC_hg19_v1_chr19_+_8455285 AK297498 AK225642 AK225036 D38516 X79780 BC110081 AB590872 AF498947 BT019535 BT019536 CR536494 CR541691 GQ129215 GQ129216	-22652	+	TSC_hg19_v1_chr19_+_8455246 AK312994	-22683	+	TSC_hg19_v1_chr19_+_8478188 NM_001005415 NM_001005416 NM_016496 AF151074	294	+	TSC_hg19_v1_chr19_+_8509599 AF061832	31688	+	NM_005968 NM_031203 TSC_hg19_v1_chr19_+_8509858 BC000138 AK293612	31896	+	BC014506|LOC100507567|100507567|uncharacterized LOC100507567##AK297498|RAB11B|9230|RAB11B, member RAS oncogene family##AK225642|RAB11B|9230|RAB11B, member RAS oncogene family##AK225036|RAB11B|9230|RAB11B, member RAS oncogene family##D38516|RAB11B|9230|RAB11B, member RAS oncogene family##X79780|RAB11B|9230|RAB11B, member RAS oncogene family##BC110081|RAB11B|9230|RAB11B, member RAS oncogene family##AF498947|RAB11B|9230|RAB11B, member RAS oncogene family##BT019535|RAB11B|9230|RAB11B, member RAS oncogene family##BT019536|RAB11B|9230|RAB11B, member RAS oncogene family##CR536494|RAB11B|9230|RAB11B, member RAS oncogene family##CR541691|RAB11B|9230|RAB11B, member RAS oncogene family##GQ129215|RAB11B|9230|RAB11B, member RAS oncogene family##GQ129216|RAB11B|9230|RAB11B, member RAS oncogene family##AK312994|RAB11B|9230|RAB11B, member RAS oncogene family##NM_001005415|MARCH2|51257|membrane-associated ring finger (C3HC4) 2##NM_001005416|MARCH2|51257|membrane-associated ring finger (C3HC4) 2##NM_016496|MARCH2|51257|membrane-associated ring finger (C3HC4) 2##AF151074|MARCH2|51257|membrane-associated ring finger (C3HC4) 2##AF061832|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M##NM_005968|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M##NM_031203|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M##BC000138|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M	0.625226	CTCF.p2:-5:0.596
chr3	170408313	170408402	reg1005287.p1	11.801	+	TSC_hg19_v1_chr3_-_170303774 AK122655 NM_020949	-104539	-	AK098766 NM_001185056 AK294087	-269316	+	NM_005602 TSC_hg19_v1_chr3_+_170136652 AK294108 AK312923 BC013577	-271699	+	TSC_hg19_v1_chr3_-_170587985 BC107708 AL110170 BC062731 NM_001099645	179638	-	TSC_hg19_v1_chr3_-_170626397 AK311962 BC036072	218034	-	AY205258 AY205259 AY205260 AY205261 NM_020390 TSC_hg19_v1_chr3_-_170626427	218102	-	AK122655|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_020949|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_001185056|CLDN11|5010|claudin 11##AK294087|CLDN11|5010|claudin 11##NM_005602|CLDN11|5010|claudin 11##AK312923|CLDN11|5010|claudin 11##BC013577|CLDN11|5010|claudin 11##BC107708|RPL22L1|200916|ribosomal protein L22-like 1##AL110170|RPL22L1|200916|ribosomal protein L22-like 1##BC062731|RPL22L1|200916|ribosomal protein L22-like 1##NM_001099645|RPL22L1|200916|ribosomal protein L22-like 1##AK311962|EIF5A2|56648|eukaryotic translation initiation factor 5A2##BC036072|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205258|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205259|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205260|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205261|EIF5A2|56648|eukaryotic translation initiation factor 5A2##NM_020390|EIF5A2|56648|eukaryotic translation initiation factor 5A2	0.942044	CTCF.p2:0:0.942
chr4	113684023	113684150	reg1003375.p1	11.799	+	NM_015454 TSC_hg19_v1_chr4_+_113558677	-125418	+	TSC_hg19_v1_chr4_-_113558120 AK302613 AK299831 NM_018392	-125951	-	NM_016648	-125967	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	55215	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	286748	+	TSC_hg19_v1_chr4_+_114214102 AK294720	530033	+	NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7##AK302613|C4orf21|55345|chromosome 4 open reading frame 21##AK299831|C4orf21|55345|chromosome 4 open reading frame 21##NM_018392|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK294720|ANK2|287|ankyrin 2, neuronal	0.999895	CTCF.p2:-12:1.000
chr1	156695694	156695836	reg1007464.p1	11.797	+	BT019827 CR450357 DQ892265 DQ896851 M68867 BC001109 AB593017 AK312007 TSC_hg19_v1_chr1_-_156675376 NM_001878 NM_001199723	-20343	-	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	-48620	-	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	-83811	+	AY391837 AK022733 NM_030980	1903	-	TSC_hg19_v1_chr1_-_156698238 BC000575 AK095697	2462	-	TSC_hg19_v1_chr1_+_156698260 NM_001142560 NM_015997	2491	+	BT019827|CRABP2|1382|cellular retinoic acid binding protein 2##CR450357|CRABP2|1382|cellular retinoic acid binding protein 2##DQ892265|CRABP2|1382|cellular retinoic acid binding protein 2##DQ896851|CRABP2|1382|cellular retinoic acid binding protein 2##M68867|CRABP2|1382|cellular retinoic acid binding protein 2##BC001109|CRABP2|1382|cellular retinoic acid binding protein 2##AB593017|CRABP2|1382|cellular retinoic acid binding protein 2##AK312007|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001878|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001199723|CRABP2|1382|cellular retinoic acid binding protein 2##BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##AY391837|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK022733|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_030980|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##BC000575|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK095697|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_001142560|RRNAD1|51093|ribosomal RNA adenine dimethylase domain containing 1##NM_015997|RRNAD1|51093|ribosomal RNA adenine dimethylase domain containing 1	0.993211	CTCF.p2:0:0.993
chr13	39837217	39837353	reg1008888.p1	11.797	+	TSC_hg19_v1_chr13_+_39612534 AL833329 NM_001012754 NM_001017370 BX648122 BC052492 BC140877 BC140878 CR749318 AK300260 AK299198 BX647872	-224750	+	TSC_hg19_v1_chr13_-_39612251 NM_025138 NM_170719	-225032	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	-225084	-	AF098807 BC017824 TSC_hg19_v1_chr13_-_40177268	339959	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	340042	-	NM_005780 TSC_hg19_v1_chr13_-_40177356	340077	-	AL833329|NHLRC3|387921|NHL repeat containing 3##NM_001012754|NHLRC3|387921|NHL repeat containing 3##NM_001017370|NHLRC3|387921|NHL repeat containing 3##BX648122|NHLRC3|387921|NHL repeat containing 3##BC052492|NHLRC3|387921|NHL repeat containing 3##BC140877|NHLRC3|387921|NHL repeat containing 3##BC140878|NHLRC3|387921|NHL repeat containing 3##CR749318|NHLRC3|387921|NHL repeat containing 3##AK300260|NHLRC3|387921|NHL repeat containing 3##AK299198|NHLRC3|387921|NHL repeat containing 3##BX647872|NHLRC3|387921|NHL repeat containing 3##NM_025138|PROSER1|80209|proline and serine rich 1##NM_170719|PROSER1|80209|proline and serine rich 1##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1##AF098807|LHFP|10186|lipoma HMGIC fusion partner##BC017824|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##NM_005780|LHFP|10186|lipoma HMGIC fusion partner	0.738001	CTCF.p2:7:0.738
chr7	8476647	8476779	reg1009266.p1	11.797	+	AK315141 TSC_hg19_v1_chr7_+_8474016 AK091655 BC047505 AK296248	-2593	+	AB047362 AB073665 NM_152745 TSC_hg19_v1_chr7_+_8473633	-3103	+	TSC_hg19_v1_chr7_+_8473238 AK095624	-3475	+	CR407618 CR541716 TSC_hg19_v1_chr7_-_10979730 AF201077 BC101794 BC101796	2502996	-	AK130950 TSC_hg19_v1_chr7_-_10979760 AK024837 U94586 BC105295 NM_002489	2503071	-	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	2536797	+	AK315141|NXPH1|30010|neurexophilin 1##AK091655|NXPH1|30010|neurexophilin 1##BC047505|NXPH1|30010|neurexophilin 1##AK296248|NXPH1|30010|neurexophilin 1##AB047362|NXPH1|30010|neurexophilin 1##AB073665|NXPH1|30010|neurexophilin 1##NM_152745|NXPH1|30010|neurexophilin 1##AK095624|NXPH1|30010|neurexophilin 1##CR407618|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR541716|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AF201077|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101794|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101796|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK130950|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK024837|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##U94586|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC105295|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_002489|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14	0.96956	CTCF.p2:-1:0.970
chr3	98833543	98833648	reg1007176.p1	11.796	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-213103	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-382008	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-382350	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	523855	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	703150	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	761396	-	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like	0.010901	
chr12	6844979	6845105	reg1008842.p1	11.795	+	TSC_hg19_v1_chr12_+_6833448 NM_001164093 AK292621	-11589	+	BC011789 TSC_hg19_v1_chr12_+_6833295 AB033603	-11721	+	AK001318 AK022488 TSC_hg19_v1_chr12_+_6833275	-11769	+	AK289869 NM_005439 TSC_hg19_v1_chr12_-_6862130	17063	-	TSC_hg19_v1_chr12_-_6862261 BC000898 U57342 BC002340 AF070539	17183	-	TSC_hg19_v1_chr12_+_6875528 NM_002824	30478	+	NM_001164093|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##AK292621|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##BC011789|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##AB033603|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##AK001318|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##AK022488|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##AK289869|MLF2|8079|myeloid leukemia factor 2##NM_005439|MLF2|8079|myeloid leukemia factor 2##BC000898|MLF2|8079|myeloid leukemia factor 2##U57342|MLF2|8079|myeloid leukemia factor 2##BC002340|MLF2|8079|myeloid leukemia factor 2##AF070539|MLF2|8079|myeloid leukemia factor 2##NM_002824|PTMS|5763|parathymosin	0.989386	CTCF.p2:-8:0.989
chr1	79083332	79083466	reg1008893.p1	11.795	+	NM_000959 NM_001039585 AK292845 AK312816 AY485530 L24470 BC112965 AF004021	-126615	+	TSC_hg19_v1_chr1_+_78511749 AK225941 AB073737 AB528004 CU690284	-571637	+	BC036075 NM_017655 TSC_hg19_v1_chr1_+_78511713	-571736	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	2732	+	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	32099	+	BC025721 AY358360 AK292894 AK313738 NM_022159	389028	-	NM_000959|PTGFR|5737|prostaglandin F receptor (FP)##NM_001039585|PTGFR|5737|prostaglandin F receptor (FP)##AK292845|PTGFR|5737|prostaglandin F receptor (FP)##AK312816|PTGFR|5737|prostaglandin F receptor (FP)##AY485530|PTGFR|5737|prostaglandin F receptor (FP)##L24470|PTGFR|5737|prostaglandin F receptor (FP)##BC112965|PTGFR|5737|prostaglandin F receptor (FP)##AF004021|PTGFR|5737|prostaglandin F receptor (FP)##AK225941|GIPC2|54810|GIPC PDZ domain containing family, member 2##AB073737|GIPC2|54810|GIPC PDZ domain containing family, member 2##BC036075|GIPC2|54810|GIPC PDZ domain containing family, member 2##NM_017655|GIPC2|54810|GIPC PDZ domain containing family, member 2##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1	0.990071	CTCF.p2:-4:0.990
chr2	95781199	95781315	reg1008466.p1	11.795	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	-89775	+	AK097438 BC021716 NM_144705 AK296678 CU692394	-244007	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3933254	-	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	6285	-	AB049940 TSC_hg19_v1_chr2_-_95787749 BC014172 NM_031902	6455	-	AK027363 NM_032788	44005	-	BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5##AB049940|MRPS5|64969|mitochondrial ribosomal protein S5##BC014172|MRPS5|64969|mitochondrial ribosomal protein S5##NM_031902|MRPS5|64969|mitochondrial ribosomal protein S5##AK027363|ZNF514|84874|zinc finger protein 514##NM_032788|ZNF514|84874|zinc finger protein 514	0.993309	CTCF.p2:13:0.993
chr16	49384523	49384637	reg1007243.p1	11.794	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-68846	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	-69080	-	AB527638 TSC_hg19_v1_chr16_-_49315397	-69187	-	BC021181 BC021718 NM_144602 CU676858	23248	+	NM_015069	476337	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	674560	+	M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##NM_015069|ZNF423|23090|zinc finger protein 423##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188	0.99861	CTCF.p2:14:0.999
chrX	114996293	114996448	reg1006470.p1	11.794	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-168502	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-199328	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-200764	+	BC003645 TSC_hg19_v1_chrX_-_115085443	89069	-	AK313927 NM_000686 X87723 U16957	305625	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	571397	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:21:0.429
chr1	111038732	111038844	reg1006991.p1	11.793	+	AY358683 AF333024 NM_032414 AY029225 BC025399 DQ891570 DQ894763	-44997	+	HQ257924 NM_006402 BC062619	-88262	-	TSC_hg19_v1_chr1_-_110950302 AF029890 AK054769	-88485	-	NM_005549	23008	-	AK290061 NM_004974 TSC_hg19_v1_chr1_-_111148981	110194	-	BC043564 NM_001204269	135307	-	AY358683|PROK1|84432|prokineticin 1##AF333024|PROK1|84432|prokineticin 1##NM_032414|PROK1|84432|prokineticin 1##AY029225|PROK1|84432|prokineticin 1##BC025399|PROK1|84432|prokineticin 1##DQ891570|PROK1|84432|prokineticin 1##DQ894763|PROK1|84432|prokineticin 1##HQ257924|HBXIP|10542|hepatitis B virus x interacting protein##NM_006402|HBXIP|10542|hepatitis B virus x interacting protein##BC062619|HBXIP|10542|hepatitis B virus x interacting protein##AF029890|HBXIP|10542|hepatitis B virus x interacting protein##AK054769|HBXIP|10542|hepatitis B virus x interacting protein##NM_005549|KCNA10|3744|potassium voltage-gated channel, shaker-related subfamily, member 10##AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##BC043564|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_001204269|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2	0.995692	CTCF.p2:19:0.996
chr1	182931780	182931906	reg1007391.p1	11.792	+	BC050305 BC132764 BC144326 AF288398 NM_030933 BC026084	-9262	-	TSC_hg19_v1_chr1_-_182922024 AF288397 HQ258630 BC026086	-9707	-	TSC_hg19_v1_chr1_+_182808481 AK308165 BC137136 BC144494 BC014246 AF086352 BC025245 BC008773 L13848	-123333	+	TSC_hg19_v1_chr1_+_182992572 BC067813 NM_002293 J03202	60661	+	TSC_hg19_v1_chr1_+_182992694 AB385108	60929	+	BC035429 TSC_hg19_v1_chr1_+_183114284	182408	+	BC050305|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC132764|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC144326|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##AF288398|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##NM_030933|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC026084|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##AF288397|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##HQ258630|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC026086|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##AK308165|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##BC137136|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##BC144494|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##BC014246|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##AF086352|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##BC025245|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##BC008773|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##L13848|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##BC067813|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##NM_002293|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##J03202|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##BC035429|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)	0.078579	
chr19	36207722	36207862	reg1001380.p1	11.792	+	AF130255 NM_014383	-3963	+	BC107097 BC107098 NM_007000 AF085807	-50076	+	TSC_hg19_v1_chr19_+_36139253 D28426 BC002478 X54473 X13923	-68540	+	TSC_hg19_v1_chr19_+_36208923 AJ007041 NM_014727	1138	+	TSC_hg19_v1_chr19_+_36209125 AF186605	1394	+	BC126481 BC126483 BC144205 AX775837 AK026226 NM_024660	25538	-	AF130255|ZBTB32|27033|zinc finger and BTB domain containing 32##NM_014383|ZBTB32|27033|zinc finger and BTB domain containing 32##BC107097|UPK1A|11045|uroplakin 1A##BC107098|UPK1A|11045|uroplakin 1A##NM_007000|UPK1A|11045|uroplakin 1A##AF085807|UPK1A|11045|uroplakin 1A##D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##AF186605|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##BC126481|IGFLR1|79713|IGF-like family receptor 1##BC126483|IGFLR1|79713|IGF-like family receptor 1##BC144205|IGFLR1|79713|IGF-like family receptor 1##AX775837|IGFLR1|79713|IGF-like family receptor 1##AK026226|IGFLR1|79713|IGF-like family receptor 1##NM_024660|IGFLR1|79713|IGF-like family receptor 1	0.987734	CTCF.p2:4:0.988
chr2	122732754	122732910	reg1008229.p1	11.792	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-219595	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-238367	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-325187	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	2050032	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	4680875	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	4680960	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	1.059806	CTCF.p2:-42:0.999
chr4	78539912	78540056	reg1009405.p1	11.792	+	AF044197 NM_006419	-107079	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-460491	+	TSC_hg19_v1_chr4_+_78078398 U47414	-461524	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	200560	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	243930	+	NM_001166133 NM_025074 TSC_hg19_v1_chr4_+_78978757 AK096838	438756	+	AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1##NM_001166133|FRAS1|80144|Fraser syndrome 1##NM_025074|FRAS1|80144|Fraser syndrome 1##AK096838|FRAS1|80144|Fraser syndrome 1	0.998748	CTCF.p2:5:0.999
chr4	89460742	89460875	reg1009224.p1	11.792	+	TSC_hg19_v1_chr4_-_89444931 NM_001042616 NM_032906	-15856	-	TSC_hg19_v1_chr4_-_89444916 AB206972 BC007876 AK312082	-15887	-	TSC_hg19_v1_chr4_+_89378269 AY337518 NM_016323 AB027289 BC140716	-82486	+	AK296379 TSC_hg19_v1_chr4_+_89513611 AK289990 BC038960 D25215 NM_014606	52813	+	BC104883 TSC_hg19_v1_chr4_-_89618996 AL834329 AK054689 BC022544 NM_153757	158167	-	AB385402 AB020721 TSC_hg19_v1_chr4_-_89744384 AK027138 BC033006 BC086875 BC058029 AK296932 NM_001015045 AK091787 AX747185	283473	-	NM_001042616|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_032906|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AB206972|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##BC007876|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AK312082|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AY337518|HERC5|51191|hect domain and RLD 5##NM_016323|HERC5|51191|hect domain and RLD 5##AB027289|HERC5|51191|hect domain and RLD 5##BC140716|HERC5|51191|hect domain and RLD 5##AK296379|HERC3|8916|hect domain and RLD 3##AK289990|HERC3|8916|hect domain and RLD 3##BC038960|HERC3|8916|hect domain and RLD 3##D25215|HERC3|8916|hect domain and RLD 3##NM_014606|HERC3|8916|hect domain and RLD 3##BC104883|NAP1L5|266812|nucleosome assembly protein 1-like 5##AL834329|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK054689|NAP1L5|266812|nucleosome assembly protein 1-like 5##BC022544|NAP1L5|266812|nucleosome assembly protein 1-like 5##NM_153757|NAP1L5|266812|nucleosome assembly protein 1-like 5##AB020721|FAM13A|10144|family with sequence similarity 13, member A##AK027138|FAM13A|10144|family with sequence similarity 13, member A##BC033006|FAM13A|10144|family with sequence similarity 13, member A##BC086875|FAM13A|10144|family with sequence similarity 13, member A##BC058029|FAM13A|10144|family with sequence similarity 13, member A##AK296932|FAM13A|10144|family with sequence similarity 13, member A##NM_001015045|FAM13A|10144|family with sequence similarity 13, member A##AK091787|FAM13A|10144|family with sequence similarity 13, member A	0.978035	CTCF.p2:3:0.978
chr6	116882675	116882809	reg1008312.p1	11.792	+	NM_001139444	-15970	-	AK300309 AY358252 NM_153036 BC057769 AK056801	-32534	+	BC032556 NM_153711 AK094140 AK315572	-49921	+	AK290727 TSC_hg19_v1_chr6_+_116892562	9803	+	TSC_hg19_v1_chr6_+_116892580 NM_001007464 NM_015952 NM_016104	9860	+	TSC_hg19_v1_chr6_+_116892666 AK301089 BC012534 AF132958 BC015802	9925	+	NM_001139444|BET3L|100128327|BET3 like (S. cerevisiae)##AK300309|FAM26D|221301|family with sequence similarity 26, member D##AY358252|FAM26D|221301|family with sequence similarity 26, member D##NM_153036|FAM26D|221301|family with sequence similarity 26, member D##BC057769|FAM26D|221301|family with sequence similarity 26, member D##AK056801|FAM26D|221301|family with sequence similarity 26, member D##BC032556|FAM26E|254228|family with sequence similarity 26, member E##NM_153711|FAM26E|254228|family with sequence similarity 26, member E##AK094140|FAM26E|254228|family with sequence similarity 26, member E##AK315572|FAM26E|254228|family with sequence similarity 26, member E##AK290727|RWDD1|51389|RWD domain containing 1##NM_001007464|RWDD1|51389|RWD domain containing 1##NM_015952|RWDD1|51389|RWD domain containing 1##NM_016104|RWDD1|51389|RWD domain containing 1##AK301089|RWDD1|51389|RWD domain containing 1##BC012534|RWDD1|51389|RWD domain containing 1##AF132958|RWDD1|51389|RWD domain containing 1##BC015802|RWDD1|51389|RWD domain containing 1	0.993433	CTCF.p2:6:0.993
chr10	124194855	124194981	reg1006459.p1	11.791	+	NM_021622 AF286160	-43088	+	AK057463 NM_001195608	-49334	+	AK314660 TSC_hg19_v1_chr10_+_124134274 BC001136	-60673	+	BC066349 NM_001099667 BC090924	19261	+	TSC_hg19_v1_chr10_+_124221068 AK091944 AX747270 NM_002775 AK092476 AK290089 BC011352 D87258 BC031082 Y07921 AB590567	26158	+	AF159456 AJ000342 AJ243212 AJ243224 NM_004406 NM_007329 NM_017579 BC153299 AJ297935 AK304149 TSC_hg19_v1_chr10_+_124320269 AK304128	125308	+	NM_021622|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##AF286160|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##AK057463|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##NM_001195608|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##AK314660|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##BC001136|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##BC066349|ARMS2|387715|age-related maculopathy susceptibility 2##NM_001099667|ARMS2|387715|age-related maculopathy susceptibility 2##BC090924|ARMS2|387715|age-related maculopathy susceptibility 2##AK091944|HTRA1|5654|HtrA serine peptidase 1##NM_002775|HTRA1|5654|HtrA serine peptidase 1##AK092476|HTRA1|5654|HtrA serine peptidase 1##AK290089|HTRA1|5654|HtrA serine peptidase 1##BC011352|HTRA1|5654|HtrA serine peptidase 1##D87258|HTRA1|5654|HtrA serine peptidase 1##BC031082|HTRA1|5654|HtrA serine peptidase 1##Y07921|HTRA1|5654|HtrA serine peptidase 1##AF159456|DMBT1|1755|deleted in malignant brain tumors 1##AJ000342|DMBT1|1755|deleted in malignant brain tumors 1##AJ243212|DMBT1|1755|deleted in malignant brain tumors 1##AJ243224|DMBT1|1755|deleted in malignant brain tumors 1##NM_004406|DMBT1|1755|deleted in malignant brain tumors 1##NM_007329|DMBT1|1755|deleted in malignant brain tumors 1##NM_017579|DMBT1|1755|deleted in malignant brain tumors 1##BC153299|DMBT1|1755|deleted in malignant brain tumors 1##AJ297935|DMBT1|1755|deleted in malignant brain tumors 1##AK304149|DMBT1|1755|deleted in malignant brain tumors 1##AK304128|DMBT1|1755|deleted in malignant brain tumors 1	0.998428	CTCF.p2:26:0.998
chr6	37452100	37452190	reg1005451.p1	11.790	+	AB385274 TSC_hg19_v1_chr6_+_37403469	-48708	+	TSC_hg19_v1_chr6_+_37401050 AK292564	-51090	+	TSC_hg19_v1_chr6_+_37400996 NM_015050 BC031890 D43949	-51199	+	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	15507	-	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	15551	-	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	213561	-	AK292564|FTSJD2|23070|FtsJ methyltransferase domain containing 2##NM_015050|FTSJD2|23070|FtsJ methyltransferase domain containing 2##BC031890|FTSJD2|23070|FtsJ methyltransferase domain containing 2##D43949|FTSJD2|23070|FtsJ methyltransferase domain containing 2##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1	1.04039	CTCF.p2:2:0.996
chr1	32083866	32083978	reg1006184.p1	11.789	+	BC035686 AK290521 NM_001525	-629	+	AK027839 TSC_hg19_v1_chr1_+_32050592	-33368	+	NM_001204415 TSC_hg19_v1_chr1_+_32043786	-40155	+	CR542139 CU678186 CU680360 BC002773 AK301226 TSC_hg19_v1_chr1_-_32110478 AB018357 AB026628 BC012561 AY359011 AK001420	26553	-	NM_012392	26915	-	M92642 TSC_hg19_v1_chr1_-_32169608	85660	-	BC035686|HCRTR1|3061|hypocretin (orexin) receptor 1##AK290521|HCRTR1|3061|hypocretin (orexin) receptor 1##NM_001525|HCRTR1|3061|hypocretin (orexin) receptor 1##AK027839|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_001204415|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##CR542139|PEF1|553115|penta-EF-hand domain containing 1##BC002773|PEF1|553115|penta-EF-hand domain containing 1##AK301226|PEF1|553115|penta-EF-hand domain containing 1##AB018357|PEF1|553115|penta-EF-hand domain containing 1##AB026628|PEF1|553115|penta-EF-hand domain containing 1##BC012561|PEF1|553115|penta-EF-hand domain containing 1##AY359011|PEF1|553115|penta-EF-hand domain containing 1##AK001420|PEF1|553115|penta-EF-hand domain containing 1##NM_012392|PEF1|553115|penta-EF-hand domain containing 1##M92642|COL16A1|1307|collagen, type XVI, alpha 1	0.044202	
chr17	5495854	5495983	reg1008588.p1	11.789	+	AF298548 TSC_hg19_v1_chr17_-_5487785 AF310105 AB023143 BC028066 BC051787 AK310936 NM_001033053 NM_014922 NM_033004 NM_033006 NM_033007	-8119	-	AF217966 AF131825 NM_001162371 TSC_hg19_v1_chr17_-_5404327	-91602	-	AK289939 AL136906 NM_024039	-105689	+	AK309645 TSC_hg19_v1_chr17_+_5972435 AK289603	476512	+	TSC_hg19_v1_chr17_+_5973700 AL833730 NM_015253	477889	+	TSC_hg19_v1_chr17_+_5974408 BC009975	478499	+	AF298548|NLRP1|22861|NLR family, pyrin domain containing 1##AF310105|NLRP1|22861|NLR family, pyrin domain containing 1##AB023143|NLRP1|22861|NLR family, pyrin domain containing 1##AK310936|NLRP1|22861|NLR family, pyrin domain containing 1##NM_001033053|NLRP1|22861|NLR family, pyrin domain containing 1##NM_014922|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033004|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033006|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033007|NLRP1|22861|NLR family, pyrin domain containing 1##AF217966|LOC728392|728392|uncharacterized LOC728392##AF131825|LOC728392|728392|uncharacterized LOC728392##NM_001162371|LOC728392|728392|uncharacterized LOC728392##AK289939|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AL136906|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##NM_024039|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AK309645|WSCD1|23302|WSC domain containing 1##AK289603|WSCD1|23302|WSC domain containing 1##AL833730|WSCD1|23302|WSC domain containing 1##NM_015253|WSCD1|23302|WSC domain containing 1##BC009975|WSCD1|23302|WSC domain containing 1	0.994807	CTCF.p2:-13:0.995
chr19	34612086	34612185	reg1004636.p2	11.789	+	TSC_hg19_v1_chr19_+_34287743 NM_001129994 NM_001129995 NM_024076 AK027901 AK291465 BC001185 BC009335 AK225793 AK294543	-324399	+	BC018723 NM_022467	-436702	+	TSC_hg19_v1_chr19_+_34112858 NM_001127895 NM_001127896 BC014250 BC011380 AB047801	-499200	+	TSC_hg19_v1_chr19_+_34663327 BC016842 NM_001114093 NM_015578	51196	+	TSC_hg19_v1_chr19_+_34663429 AK300208	51291	+	TSC_hg19_v1_chr19_+_34663440 AL834398 AK027643 AB069974 AB069975	51333	+	NM_001129994|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_001129995|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_024076|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK027901|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK291465|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC001185|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC009335|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK225793|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK294543|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127895|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127896|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC014250|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC011380|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##AB047801|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC016842|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_001114093|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_015578|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK300208|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AL834398|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK027643|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069974|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069975|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)	0.700298	CTCF.p2:-4:0.700
chr1	101704410	101704541	reg1008311.p1	11.788	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-1905	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-2094	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-213042	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	758012	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	758315	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1792308	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.146367	
chr20	60985315	60985472	reg1012640.p1	11.788	+	TSC_hg19_v1_chr20_-_60982342 NM_031215	-3049	-	NM_001024 TSC_hg19_v1_chr20_+_60962159 BC021990 D28422 BC027976 L04483 X79563 BC071927 BC018140	-23242	+	AB587309 TSC_hg19_v1_chr20_-_60942345 BC015386 BC085017 AF443072 NM_005560	-43016	-	AK074919 TSC_hg19_v1_chr20_-_61002592 AK290299 NM_080833	17215	-	BC047790 NM_080473 TSC_hg19_v1_chr20_-_61051052	65645	-	AK056985 NM_178463	162266	+	NM_031215|CABLES2|81928|Cdk5 and Abl enzyme substrate 2##NM_001024|RPS21|6227|ribosomal protein S21##BC021990|RPS21|6227|ribosomal protein S21##BC027976|RPS21|6227|ribosomal protein S21##L04483|RPS21|6227|ribosomal protein S21##X79563|RPS21|6227|ribosomal protein S21##BC071927|RPS21|6227|ribosomal protein S21##BC018140|RPS21|6227|ribosomal protein S21##BC015386|LAMA5|3911|laminin, alpha 5##BC085017|LAMA5|3911|laminin, alpha 5##AF443072|LAMA5|3911|laminin, alpha 5##NM_005560|LAMA5|3911|laminin, alpha 5##AK074919|C20orf151|140893|chromosome 20 open reading frame 151##AK290299|C20orf151|140893|chromosome 20 open reading frame 151##NM_080833|C20orf151|140893|chromosome 20 open reading frame 151##BC047790|GATA5|140628|GATA binding protein 5##NM_080473|GATA5|140628|GATA binding protein 5##AK056985|C20orf166|128826|chromosome 20 open reading frame 166##NM_178463|C20orf166|128826|chromosome 20 open reading frame 166	0.328231	CTCF.p2:16:0.328
chr22	30031876	30032008	reg1009555.p1	11.788	+	BC020257 TSC_hg19_v1_chr22_+_29999653 BC003112 L11353 Z22664 CR456530 AF122827 AF122828 AF123570 AB587384 CU013130 CU013418 DQ891697 DQ894878 AF369661 AF369662 AF369663 AF369664 AF369665 AF369666 AF369667 AF369668 EF517524 S73853	-32078	+	TSC_hg19_v1_chr22_+_29999621 AF369701	-32328	+	AK297116 TSC_hg19_v1_chr22_+_29999605	-32337	+	TSC_hg19_v1_chr22_+_30116288 BC051805 NM_182527 HQ257899	84408	+	BC009717 TSC_hg19_v1_chr22_-_30162985 AK292671 NM_001003692 NM_019103	131018	-	TSC_hg19_v1_chr22_-_30162997 AK123261	131053	-	BC020257|NF2|4771|neurofibromin 2 (merlin)##BC003112|NF2|4771|neurofibromin 2 (merlin)##L11353|NF2|4771|neurofibromin 2 (merlin)##Z22664|NF2|4771|neurofibromin 2 (merlin)##CR456530|NF2|4771|neurofibromin 2 (merlin)##AF122827|NF2|4771|neurofibromin 2 (merlin)##AF122828|NF2|4771|neurofibromin 2 (merlin)##AF123570|NF2|4771|neurofibromin 2 (merlin)##CU013130|NF2|4771|neurofibromin 2 (merlin)##CU013418|NF2|4771|neurofibromin 2 (merlin)##DQ891697|NF2|4771|neurofibromin 2 (merlin)##DQ894878|NF2|4771|neurofibromin 2 (merlin)##AF369661|NF2|4771|neurofibromin 2 (merlin)##AF369662|NF2|4771|neurofibromin 2 (merlin)##AF369663|NF2|4771|neurofibromin 2 (merlin)##AF369664|NF2|4771|neurofibromin 2 (merlin)##AF369665|NF2|4771|neurofibromin 2 (merlin)##AF369666|NF2|4771|neurofibromin 2 (merlin)##AF369667|NF2|4771|neurofibromin 2 (merlin)##AF369668|NF2|4771|neurofibromin 2 (merlin)##EF517524|NF2|4771|neurofibromin 2 (merlin)##S73853|NF2|4771|neurofibromin 2 (merlin)##AF369701|NF2|4771|neurofibromin 2 (merlin)##AK297116|NF2|4771|neurofibromin 2 (merlin)##BC051805|CABP7|164633|calcium binding protein 7##NM_182527|CABP7|164633|calcium binding protein 7##HQ257899|CABP7|164633|calcium binding protein 7##BC009717|ZMAT5|55954|zinc finger, matrin-type 5##AK292671|ZMAT5|55954|zinc finger, matrin-type 5##NM_001003692|ZMAT5|55954|zinc finger, matrin-type 5##NM_019103|ZMAT5|55954|zinc finger, matrin-type 5	0.992052	CTCF.p2:-13:0.992
chr4	185926495	185926610	reg1006472.p1	11.788	+	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	-179318	-	TSC_hg19_v1_chr4_-_185747123 L09229 AK292798	-179451	-	TSC_hg19_v1_chr4_-_185726866 AK296826	-199649	-	BC140795 BC144567 BC144568 BC144569 NM_001029887	13486	+	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	137918	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	198592	-	AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##L09229|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK292798|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##BC140795|HELT|391723|helt bHLH transcription factor##BC144567|HELT|391723|helt bHLH transcription factor##BC144569|HELT|391723|helt bHLH transcription factor##NM_001029887|HELT|391723|helt bHLH transcription factor##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430	0.999515	CTCF.p2:0:1.000
chr11	66197590	66197712	reg1009693.p1	11.787	+	AK096253 NM_178864 TSC_hg19_v1_chr11_+_66188505 AB049469 BC105001 BC105003 BC143630 EU446888	-9090	+	AF029358 BC093634 BC143335 X86681 TSC_hg19_v1_chr11_-_66139222 AF034102 AF401235 NM_001532	-58474	-	CU692428 DQ892706 DQ895957 AK075354 AK098779 AK225182 TSC_hg19_v1_chr11_-_66115101 AK294604 BC021965 AK293715 AF029893 AK098389 NM_006876	-82560	-	TSC_hg19_v1_chr11_-_66206308 BC108277 AB049638 AK290084 AK223112 BC005002 AF151871 NM_016050 NM_170738 NM_170739	8635	-	AK094060 AX748433 NM_001243135	36146	+	TSC_hg19_v1_chr11_-_66234176 AK127603	36541	-	AK096253|NPAS4|266743|neuronal PAS domain protein 4##NM_178864|NPAS4|266743|neuronal PAS domain protein 4##AB049469|NPAS4|266743|neuronal PAS domain protein 4##BC105001|NPAS4|266743|neuronal PAS domain protein 4##BC105003|NPAS4|266743|neuronal PAS domain protein 4##BC143630|NPAS4|266743|neuronal PAS domain protein 4##EU446888|NPAS4|266743|neuronal PAS domain protein 4##AF029358|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC093634|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC143335|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##X86681|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF034102|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF401235|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##NM_001532|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##BC108277|MRPL11|65003|mitochondrial ribosomal protein L11##AB049638|MRPL11|65003|mitochondrial ribosomal protein L11##AK290084|MRPL11|65003|mitochondrial ribosomal protein L11##AK223112|MRPL11|65003|mitochondrial ribosomal protein L11##BC005002|MRPL11|65003|mitochondrial ribosomal protein L11##AF151871|MRPL11|65003|mitochondrial ribosomal protein L11##NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11##NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11##NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11##AK094060|PELI3|246330|pellino homolog 3 (Drosophila)##NM_001243135|PELI3|246330|pellino homolog 3 (Drosophila)##AK127603|MRPL11|65003|mitochondrial ribosomal protein L11	1.036111	CTCF.p2:0:0.999
chr15	50296029	50296159	reg1008100.p1	11.787	+	TSC_hg19_v1_chr15_+_49913254 NM_001144955 NM_020234 BC018028 AF168717 AK290184 BC093073 BC032535	-382845	+	BC048125 BC048139 AK057362 NM_152647	-383011	-	NM_002009 BC010956 AK313160 M60828 S81661	-580678	+	AB075819 TSC_hg19_v1_chr15_-_50405521	109422	-	TSC_hg19_v1_chr15_-_50411492 BC144298 BC144297 NM_024837	115372	-	TSC_hg19_v1_chr15_+_50474425 AK290262 NM_001159629 NM_003645 AF096290 AK222859 D88308 AK223145 BC057770 CU691220	178396	+	NM_001144955|DTWD1|56986|DTW domain containing 1##NM_020234|DTWD1|56986|DTW domain containing 1##BC018028|DTWD1|56986|DTW domain containing 1##AF168717|DTWD1|56986|DTW domain containing 1##AK290184|DTWD1|56986|DTW domain containing 1##BC093073|DTWD1|56986|DTW domain containing 1##BC032535|DTWD1|56986|DTW domain containing 1##BC048125|C15orf33|196951|chromosome 15 open reading frame 33##BC048139|C15orf33|196951|chromosome 15 open reading frame 33##AK057362|C15orf33|196951|chromosome 15 open reading frame 33##NM_152647|C15orf33|196951|chromosome 15 open reading frame 33##NM_002009|FGF7|2252|fibroblast growth factor 7##BC010956|FGF7|2252|fibroblast growth factor 7##AK313160|FGF7|2252|fibroblast growth factor 7##M60828|FGF7|2252|fibroblast growth factor 7##S81661|FGF7|2252|fibroblast growth factor 7##AB075819|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4##AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	0.997691	CTCF.p2:18:0.998
chr2	106162328	106162439	reg1007059.p1	11.787	+	NM_201557	-107154	-	TSC_hg19_v1_chr2_-_106015453 BC093049 CR936799 BC036085 BC021049 AK313841 L42176 NM_001039492 BC012742 BC014397 DQ266432 NM_001450 NM_201555	-146832	-	TSC_hg19_v1_chr2_+_105954010 AK127661 BC001310 NM_024093 DQ891212 DQ894395	-208359	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	199160	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	270592	+	NM_001004720 BC000103	305878	+	NM_201557|FHL2|2274|four and a half LIM domains 2##BC093049|FHL2|2274|four and a half LIM domains 2##CR936799|FHL2|2274|four and a half LIM domains 2##BC036085|FHL2|2274|four and a half LIM domains 2##AK313841|FHL2|2274|four and a half LIM domains 2##L42176|FHL2|2274|four and a half LIM domains 2##NM_001039492|FHL2|2274|four and a half LIM domains 2##BC012742|FHL2|2274|four and a half LIM domains 2##BC014397|FHL2|2274|four and a half LIM domains 2##DQ266432|FHL2|2274|four and a half LIM domains 2##NM_001450|FHL2|2274|four and a half LIM domains 2##NM_201555|FHL2|2274|four and a half LIM domains 2##AK127661|C2orf49|79074|chromosome 2 open reading frame 49##BC001310|C2orf49|79074|chromosome 2 open reading frame 49##NM_024093|C2orf49|79074|chromosome 2 open reading frame 49##DQ891212|C2orf49|79074|chromosome 2 open reading frame 49##DQ894395|C2orf49|79074|chromosome 2 open reading frame 49##NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2	1.324613	CTCF.p2:-1:0.992	CTCF.p2:-48:0.333
chr21	37212616	37212737	reg1007556.p1	11.787	+	AK310646 TSC_hg19_v1_chr21_-_36421641 D43969	-791041	-	TSC_hg19_v1_chr21_-_36421598 NM_001754	-791073	-	TSC_hg19_v1_chr21_-_36421585 AK310587 D89788 D89789 D89790	-791095	-	AK095215 BC002898 TSC_hg19_v1_chr21_-_37432613 AB004853 NM_001007259 AF391112 AK001660	219944	-	BC036556 TSC_hg19_v1_chr21_-_37432809 AK300009 NM_017438	220140	-	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	229577	+	D43969|RUNX1|861|runt-related transcription factor 1##NM_001754|RUNX1|861|runt-related transcription factor 1##AK310587|RUNX1|861|runt-related transcription factor 1##D89788|RUNX1|861|runt-related transcription factor 1##D89789|RUNX1|861|runt-related transcription factor 1##D89790|RUNX1|861|runt-related transcription factor 1##AK095215|SETD4|54093|SET domain containing 4##BC002898|SETD4|54093|SET domain containing 4##AB004853|SETD4|54093|SET domain containing 4##NM_001007259|SETD4|54093|SET domain containing 4##AF391112|SETD4|54093|SET domain containing 4##AK001660|SETD4|54093|SET domain containing 4##BC036556|SETD4|54093|SET domain containing 4##AK300009|SETD4|54093|SET domain containing 4##NM_017438|SETD4|54093|SET domain containing 4##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1	0.966402	CTCF.p2:13:0.966
chr10	88137086	88137216	reg1008522.p1	11.785	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	-10888	-	TSC_hg19_v1_chr10_+_86184685 AK294321	-1952456	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-2005533	+	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	144343	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	144379	-	DQ426884 NM_001030015 NM_033282 BC029291 BC113558 BC143688	277243	+	AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_001030015|OPN4|94233|opsin 4##NM_033282|OPN4|94233|opsin 4##BC029291|OPN4|94233|opsin 4##BC113558|OPN4|94233|opsin 4##BC143688|OPN4|94233|opsin 4	0.998949	CTCF.p2:17:0.999
chr9	38088090	38088200	reg1005432.p1	11.785	+	X75342 NM_003028 TSC_hg19_v1_chr9_-_38069225 BC094765	-18904	-	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	-19004	-	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	-183779	-	TSC_hg19_v1_chr9_+_38392669 NM_000692	304528	+	TSC_hg19_v1_chr9_+_38392698 AK313344	304552	+	TSC_hg19_v1_chr9_+_38392760 AK297020 BC001619 AK225950	304597	+	X75342|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_003028|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B##AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK313344|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK297020|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##BC001619|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK225950|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1	0.993053	CTCF.p2:1:0.993
chr10	89874211	89874326	reg1006945.p1	11.784	+	TSC_hg19_v1_chr10_+_89623420 U96180	-250841	+	TSC_hg19_v1_chr10_+_89623380 BC005821	-250879	+	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	-251042	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	468746	-	BC042900 BC031219 NM_001010939	472245	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	549912	+	U96180|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric	0.967911	CTCF.p2:21:0.968
chr12	131246362	131246502	reg1009517.p1	11.784	+	TSC_hg19_v1_chr12_-_131200818 BC007632	-45607	-	AB002316 NM_015347	-244023	-	TSC_hg19_v1_chr12_+_130822635 BC028581 AF387507 AF104260 AK093133 AX747944	-423810	+	TSC_hg19_v1_chr12_-_131323796 D14582 BC047496 NM_001980 NM_194356	77321	-	TSC_hg19_v1_chr12_+_131356615 AF054183 AK311223 AK316193 AK312466 BC000852 NM_006325	110154	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	110193	+	BC007632|RIMBP2|23504|RIMS binding protein 2##AB002316|RIMBP2|23504|RIMS binding protein 2##NM_015347|RIMBP2|23504|RIMS binding protein 2##BC028581|PIWIL1|9271|piwi-like 1 (Drosophila)##AF387507|PIWIL1|9271|piwi-like 1 (Drosophila)##AF104260|PIWIL1|9271|piwi-like 1 (Drosophila)##AK093133|PIWIL1|9271|piwi-like 1 (Drosophila)##D14582|STX2|2054|syntaxin 2##BC047496|STX2|2054|syntaxin 2##NM_001980|STX2|2054|syntaxin 2##NM_194356|STX2|2054|syntaxin 2##AF054183|RAN|5901|RAN, member RAS oncogene family##AK316193|RAN|5901|RAN, member RAS oncogene family##AK312466|RAN|5901|RAN, member RAS oncogene family##BC000852|RAN|5901|RAN, member RAS oncogene family##NM_006325|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family	0.943642	CTCF.p2:-16:0.944
chr8	29504933	29505075	reg1007413.p1	11.784	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-296934	-	AL137704 NM_057158	-298683	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-384390	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	435470	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	435568	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	447939	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	1.400588	CTCF.p2:-7:0.991	CTCF.p2:42:0.410
chr16	19612798	19612957	reg1006978.p1	11.783	+	TSC_hg19_v1_chr16_+_19567045 BX537867 AK095078 AK290286 AL832159 BC058845 AL833428 EU831926 EU832021	-45841	+	AK294885 NM_020314	-46141	+	NM_001199022 NM_014711 TSC_hg19_v1_chr16_+_19535277 BC036654 AK300426 AB007879 CR749255 BC030223	-77646	+	TSC_hg19_v1_chr16_+_19727698 AF520569 AF520570 AK000122 NM_153208	114860	+	TSC_hg19_v1_chr16_-_19729532 BC117562 NM_001012991	116610	-	AK295204 AF202640 TSC_hg19_v1_chr16_-_19896168 BC034467 AF181862 NM_016235 AK294680 AK075119 AK315989 AK296754	283287	-	BX537867|C16orf62|57020|chromosome 16 open reading frame 62##AK095078|C16orf62|57020|chromosome 16 open reading frame 62##AK290286|C16orf62|57020|chromosome 16 open reading frame 62##AL832159|C16orf62|57020|chromosome 16 open reading frame 62##BC058845|C16orf62|57020|chromosome 16 open reading frame 62##AL833428|C16orf62|57020|chromosome 16 open reading frame 62##EU831926|C16orf62|57020|chromosome 16 open reading frame 62##EU832021|C16orf62|57020|chromosome 16 open reading frame 62##AK294885|C16orf62|57020|chromosome 16 open reading frame 62##NM_020314|C16orf62|57020|chromosome 16 open reading frame 62##NM_001199022|CCP110|9738|centriolar coiled coil protein 110kDa##NM_014711|CCP110|9738|centriolar coiled coil protein 110kDa##BC036654|CCP110|9738|centriolar coiled coil protein 110kDa##AK300426|CCP110|9738|centriolar coiled coil protein 110kDa##AB007879|CCP110|9738|centriolar coiled coil protein 110kDa##CR749255|CCP110|9738|centriolar coiled coil protein 110kDa##BC030223|CCP110|9738|centriolar coiled coil protein 110kDa##AF520569|IQCK|124152|IQ motif containing K##AF520570|IQCK|124152|IQ motif containing K##AK000122|IQCK|124152|IQ motif containing K##NM_153208|IQCK|124152|IQ motif containing K##BC117562|C16orf88|400506|chromosome 16 open reading frame 88##NM_001012991|C16orf88|400506|chromosome 16 open reading frame 88##AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B	0.997841	CTCF.p2:-23:0.998
chr19	3104134	3104229	reg1000752.p1	11.783	+	TSC_hg19_v1_chr19_+_3094528 BC096225 BC096226 BC096227 AB463701 AF011497 AF493900 CR457004 AB209435	-9590	+	TSC_hg19_v1_chr19_+_3094359 BC089041 NM_002067	-9823	+	TSC_hg19_v1_chr19_-_3062919 AB527754 HQ258149 BC113735 BC113737 NM_198969 AK094591	-41174	-	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	18212	+	TSC_hg19_v1_chr19_+_3122573 BC051315 CU674752	18424	+	TSC_hg19_v1_chr19_+_3136030 GU727645 NM_002068 M63904 AK300481 AK291329 BC013585 GU727637	31963	+	BC096225|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096226|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096227|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF011497|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF493900|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##CR457004|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AB209435|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC089041|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##NM_002067|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##HQ258149|AES|166|amino-terminal enhancer of split##BC113735|AES|166|amino-terminal enhancer of split##BC113737|AES|166|amino-terminal enhancer of split##NM_198969|AES|166|amino-terminal enhancer of split##AK094591|AES|166|amino-terminal enhancer of split##BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##GU727645|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_002068|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##M63904|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK300481|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK291329|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC013585|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##GU727637|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)	0.984583	CTCF.p2:-8:0.985
chr6	26341965	26342081	reg1007755.p1	11.783	+	BC120939 CR542169 CR542187 NM_003543 DQ892790 DQ896037 BC010926 TSC_hg19_v1_chr6_-_26285763	-56278	-	BC101653 BC101655 EU446969 NM_003525	-68850	+	TSC_hg19_v1_chr6_-_26271642 AB591037 EU446974 NM_003534 BC079835	-70406	-	NM_001197247 NM_001197249 NM_007047 TSC_hg19_v1_chr6_+_26365425 AK312847 AK290880 U90546 AK303600 NM_001197248 BC002832 BC020214 AK299417	23429	+	AF257505 NM_001197246	26382	+	NM_001197238 NM_001197239 NM_001197240 NM_006995 NM_181531 AK304744 AK289883 AK293526 AK298570 U90550 BC017497 NM_001197237 BC014021	41369	+	BC120939|HIST1H4H|8365|histone cluster 1, H4h##CR542169|HIST1H4H|8365|histone cluster 1, H4h##CR542187|HIST1H4H|8365|histone cluster 1, H4h##NM_003543|HIST1H4H|8365|histone cluster 1, H4h##DQ892790|HIST1H4H|8365|histone cluster 1, H4h##DQ896037|HIST1H4H|8365|histone cluster 1, H4h##BC010926|HIST1H4H|8365|histone cluster 1, H4h##BC101653|HIST1H2BI|8346|histone cluster 1, H2bi##BC101655|HIST1H2BI|8346|histone cluster 1, H2bi##EU446969|HIST1H2BI|8346|histone cluster 1, H2bi##NM_003525|HIST1H2BI|8346|histone cluster 1, H2bi##EU446974|HIST1H3G|8355|histone cluster 1, H3g##NM_003534|HIST1H3G|8355|histone cluster 1, H3g##BC079835|HIST1H3G|8355|histone cluster 1, H3g##NM_001197247|BTN3A2|11118|butyrophilin, subfamily 3, member A2##NM_001197249|BTN3A2|11118|butyrophilin, subfamily 3, member A2##NM_007047|BTN3A2|11118|butyrophilin, subfamily 3, member A2##AK312847|BTN3A2|11118|butyrophilin, subfamily 3, member A2##AK290880|BTN3A2|11118|butyrophilin, subfamily 3, member A2##U90546|BTN3A2|11118|butyrophilin, subfamily 3, member A2##AK303600|BTN3A2|11118|butyrophilin, subfamily 3, member A2##NM_001197248|BTN3A2|11118|butyrophilin, subfamily 3, member A2##BC002832|BTN3A2|11118|butyrophilin, subfamily 3, member A2##BC020214|BTN3A2|11118|butyrophilin, subfamily 3, member A2##AK299417|BTN3A2|11118|butyrophilin, subfamily 3, member A2##AF257505|BTN3A2|11118|butyrophilin, subfamily 3, member A2##NM_001197246|BTN3A2|11118|butyrophilin, subfamily 3, member A2##NM_001197238|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197239|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197240|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_006995|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_181531|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK304744|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK289883|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK293526|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK298570|BTN2A2|10385|butyrophilin, subfamily 2, member A2##U90550|BTN2A2|10385|butyrophilin, subfamily 2, member A2##BC017497|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197237|BTN2A2|10385|butyrophilin, subfamily 2, member A2##BC014021|BTN2A2|10385|butyrophilin, subfamily 2, member A2	0.468666	CTCF.p2:8:0.388
chr4	71049505	71049624	reg1005995.p2	11.782	+	NM_214711 BX640924 BX648724 BX648895 BX647185 BX640892 BX647183 BX648872 AB528838 AM393471 BC146696	-29567	+	BC017835 NM_002159	-133406	+	NM_000200 BC009791 BC095438 M26665	-155412	+	EF113908 NM_017855	12678	+	AY190326 NM_152997 AY358958 BC062213 AF435080 AF086120	42258	+	BC010935 NM_005212 X66417	58767	+	NM_214711|C4orf40|401137|chromosome 4 open reading frame 40##BX640924|C4orf40|401137|chromosome 4 open reading frame 40##BX648724|C4orf40|401137|chromosome 4 open reading frame 40##BX648895|C4orf40|401137|chromosome 4 open reading frame 40##BX647185|C4orf40|401137|chromosome 4 open reading frame 40##BX640892|C4orf40|401137|chromosome 4 open reading frame 40##BX647183|C4orf40|401137|chromosome 4 open reading frame 40##BX648872|C4orf40|401137|chromosome 4 open reading frame 40##AM393471|C4orf40|401137|chromosome 4 open reading frame 40##BC146696|C4orf40|401137|chromosome 4 open reading frame 40##BC017835|HTN1|3346|histatin 1##NM_002159|HTN1|3346|histatin 1##NM_000200|HTN3|3347|histatin 3##BC009791|HTN3|3347|histatin 3##BC095438|HTN3|3347|histatin 3##M26665|HTN3|3347|histatin 3##EF113908|ODAM|54959|odontogenic, ameloblast asssociated##NM_017855|ODAM|54959|odontogenic, ameloblast asssociated##AY190326|C4orf7|260436|chromosome 4 open reading frame 7##NM_152997|C4orf7|260436|chromosome 4 open reading frame 7##AY358958|C4orf7|260436|chromosome 4 open reading frame 7##BC062213|C4orf7|260436|chromosome 4 open reading frame 7##AF435080|C4orf7|260436|chromosome 4 open reading frame 7##AF086120|C4orf7|260436|chromosome 4 open reading frame 7##BC010935|CSN3|1448|casein kappa##NM_005212|CSN3|1448|casein kappa##X66417|CSN3|1448|casein kappa	0.936011	CTCF.p2:-15:0.936
chr6	139309455	139309574	reg1007113.p1	11.782	+	TSC_hg19_v1_chr6_-_139309391 BC012764 NM_001128617 NM_031922	-104	-	TSC_hg19_v1_chr6_-_139309357 BC035286 AK312938	-166	-	BC021211 TSC_hg19_v1_chr6_-_139309122 AB209143	-437	-	NM_021243 AF161398 TSC_hg19_v1_chr6_+_139349850	40323	+	TSC_hg19_v1_chr6_+_139349935 AK309402 AF116682 BC014953	40404	+	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	146742	+	BC012764|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_001128617|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_031922|REPS1|85021|RALBP1 associated Eps domain containing 1##BC035286|REPS1|85021|RALBP1 associated Eps domain containing 1##AK312938|REPS1|85021|RALBP1 associated Eps domain containing 1##BC021211|REPS1|85021|RALBP1 associated Eps domain containing 1##AB209143|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_021243|C6orf115|58527|chromosome 6 open reading frame 115##AF161398|C6orf115|58527|chromosome 6 open reading frame 115##AF116682|C6orf115|58527|chromosome 6 open reading frame 115##BC014953|C6orf115|58527|chromosome 6 open reading frame 115##BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)	1.016783	CTCF.p2:-1:1.000
chr9	130160413	130160533	reg1008694.p2	11.782	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	-1027	+	NM_032293 AK293732 AK095679	-133666	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-275443	-	TSC_hg19_v1_chr9_-_130186602 AK124330	26093	-	NM_007135 TSC_hg19_v1_chr9_+_130186700 AK054606 BC062309 AK302284	26208	+	TSC_hg19_v1_chr9_+_130186718 AK316233	26248	+	BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##NM_007135|ZNF79|7633|zinc finger protein 79##AK054606|ZNF79|7633|zinc finger protein 79##BC062309|ZNF79|7633|zinc finger protein 79##AK302284|ZNF79|7633|zinc finger protein 79##AK316233|ZNF79|7633|zinc finger protein 79	0.544869	CTCF.p2:12:0.545
chr10	71718150	71718269	reg1008769.p1	11.781	+	TSC_hg19_v1_chr10_+_71562275 M59217	-155918	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	-156520	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	-156552	+	NM_018649	94147	+	TSC_hg19_v1_chr10_+_71812601 BC016172 AK022776 AK131057 AF151534 AF336304 AK022475	94388	+	TSC_hg19_v1_chr10_-_71892569 AK027403	174339	-	M59217|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##NM_018649|H2AFY2|55506|H2A histone family, member Y2##BC016172|H2AFY2|55506|H2A histone family, member Y2##AK022776|H2AFY2|55506|H2A histone family, member Y2##AK131057|H2AFY2|55506|H2A histone family, member Y2##AF151534|H2AFY2|55506|H2A histone family, member Y2##AF336304|H2AFY2|55506|H2A histone family, member Y2##AK022475|H2AFY2|55506|H2A histone family, member Y2##AK027403|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2	0.996474	CTCF.p2:19:0.996
chr10	86027413	86027529	reg1008660.p1	11.781	+	BX641033 NM_001012720 NM_001012722 NM_002921 U14910 BC011349 BC008094 BC042536 CU675929 DQ892074 DQ895267	-22644	+	AB463829 AB031547 NM_015613 DQ426882 DQ426881	-26204	-	BX648524 NM_001017924 BC140765 BC144475	-42158	-	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	60923	+	AB032954 TSC_hg19_v1_chr10_+_86131668	104147	+	TSC_hg19_v1_chr10_+_86184685 AK294321	157224	+	BX641033|RGR|5995|retinal G protein coupled receptor##NM_001012720|RGR|5995|retinal G protein coupled receptor##NM_001012722|RGR|5995|retinal G protein coupled receptor##NM_002921|RGR|5995|retinal G protein coupled receptor##U14910|RGR|5995|retinal G protein coupled receptor##BC011349|RGR|5995|retinal G protein coupled receptor##BC008094|RGR|5995|retinal G protein coupled receptor##BC042536|RGR|5995|retinal G protein coupled receptor##DQ892074|RGR|5995|retinal G protein coupled receptor##DQ895267|RGR|5995|retinal G protein coupled receptor##AB031547|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##NM_015613|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##BX648524|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##NM_001017924|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC140765|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC144475|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##AK294321|FAM190B|54462|family with sequence similarity 190, member B	0.907682	CTCF.p2:8:0.908
chr15	75976191	75976284	reg1005674.p1	11.781	+	BC018775 NM_153271 AL833039 EF219141 DQ891695 DQ895211 EU831407 EU831499	-34843	+	AB463774 AM393583 CU675427 CU680036 TSC_hg19_v1_chr15_-_75932566 BC020557 BC011745 AY050497 AL136913 BC006487 AK001830 AK223121 NM_018285	-43651	-	NM_001042588	-57519	-	AB462981 AY359468 X96753 TSC_hg19_v1_chr15_-_76005157	28891	-	TSC_hg19_v1_chr15_-_76005190 NM_001897	28958	-	TSC_hg19_v1_chr15_+_76016306 BC039862 NM_175881	40077	+	BC018775|SNX33|257364|sorting nexin 33##NM_153271|SNX33|257364|sorting nexin 33##AL833039|SNX33|257364|sorting nexin 33##EF219141|SNX33|257364|sorting nexin 33##DQ891695|SNX33|257364|sorting nexin 33##DQ895211|SNX33|257364|sorting nexin 33##EU831407|SNX33|257364|sorting nexin 33##EU831499|SNX33|257364|sorting nexin 33##AM393583|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC020557|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC011745|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AY050497|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AL136913|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC006487|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK001830|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK223121|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_018285|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_001042588|SNUPN|10073|snurportin 1##AY359468|CSPG4|1464|chondroitin sulfate proteoglycan 4##X96753|CSPG4|1464|chondroitin sulfate proteoglycan 4##NM_001897|CSPG4|1464|chondroitin sulfate proteoglycan 4##BC039862|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_175881|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1	0.996598	CTCF.p2:9:0.997
chr22	19617550	19617683	reg1009017.p1	11.781	+	AK092561 NM_001130861 NM_003277	-104757	-	TSC_hg19_v1_chr22_-_19512001 CR456420	-105586	-	BT007254 CU012981 CU013269 AB528106 AF000959 AK222466 BC002404 BC019290 BC032363 TSC_hg19_v1_chr22_-_19511925	-105761	-	TSC_hg19_v1_chr22_+_19701984 NM_002688 BC025261 U74628 U85431 Y11593 CR456545 CU013145 CU013433 AB463249 AK295940	84426	+	TSC_hg19_v1_chr22_+_19705981 NM_001009939 AK056273	88323	+	TSC_hg19_v1_chr22_+_19705998 U59632	88404	+	AK092561|CLDN5|7122|claudin 5##NM_001130861|CLDN5|7122|claudin 5##NM_003277|CLDN5|7122|claudin 5##CR456420|CLDN5|7122|claudin 5##BT007254|CLDN5|7122|claudin 5##CU012981|CLDN5|7122|claudin 5##CU013269|CLDN5|7122|claudin 5##AF000959|CLDN5|7122|claudin 5##AK222466|CLDN5|7122|claudin 5##BC002404|CLDN5|7122|claudin 5##BC019290|CLDN5|7122|claudin 5##BC032363|CLDN5|7122|claudin 5##NM_002688|SEPT5|5413|septin 5##BC025261|SEPT5|5413|septin 5##U74628|SEPT5|5413|septin 5##U85431|SEPT5|5413|septin 5##Y11593|SEPT5|5413|septin 5##CR456545|SEPT5|5413|septin 5##CU013145|SEPT5|5413|septin 5##CU013433|SEPT5|5413|septin 5##AK295940|SEPT5|5413|septin 5##NM_001009939|SEPT5|5413|septin 5##AK056273|SEPT5|5413|septin 5##U59632|SEPT5-GP1BB|100526833|SEPT5-GP1BB readthrough	0.999297	CTCF.p2:6:0.999
chr10	9384939	9385074	reg1008970.p1	11.780	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-1287523	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-1288231	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-1288357	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	1662251	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	1662279	+	AK299548 TSC_hg19_v1_chr10_+_11047339	1662334	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.779963	CTCF.p2:4:0.780
chr14	76445713	76445809	reg1005459.p2	11.780	+	TSC_hg19_v1_chr14_+_76127671 BC136472 BC136473	-318098	+	TSC_hg19_v1_chr14_+_76127610 AK309748 AY237126 BC002766	-318144	+	NM_015072 TSC_hg19_v1_chr14_+_76127588 BC110652	-318192	+	BT007287 AB590825 TSC_hg19_v1_chr14_-_76447259	1486	-	TSC_hg19_v1_chr14_-_76447323 BC018503 EF560714	1569	-	AK313564 TSC_hg19_v1_chr14_-_76447479 X14149 J03241	1710	-	BC136472|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BC136473|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##AK309748|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##AY237126|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##NM_015072|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BC110652|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BT007287|TGFB3|7043|transforming growth factor, beta 3##BC018503|TGFB3|7043|transforming growth factor, beta 3##EF560714|TGFB3|7043|transforming growth factor, beta 3##AK313564|TGFB3|7043|transforming growth factor, beta 3##X14149|TGFB3|7043|transforming growth factor, beta 3##J03241|TGFB3|7043|transforming growth factor, beta 3	0.0	
chr16	14017711	14017862	reg1009155.p1	11.780	+	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	-3755	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-1022318	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-1120067	-	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	147300	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	262732	+	BC047761 TSC_hg19_v1_chr16_+_14294209	276412	+	BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##BC047761|MKL2|57496|MKL/myocardin-like 2	0.979844	CTCF.p2:-31:0.980
chr2	43711525	43711687	reg1008706.p1	11.780	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-257864	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-257876	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-258261	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	111542	-	TSC_hg19_v1_chr2_+_43864411 BC063310	152807	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	152833	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.691115	CTCF.p2:34:0.691
chr13	29655324	29655433	reg1005826.p1	11.779	+	BC150245 AB018317 NM_001033602 AB384524	-56603	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	-362323	-	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	-422084	+	BC032481 NM_015233 AK293970 BC119654 BC119655 BC129985	347432	+	AK301633 TSC_hg19_v1_chr13_+_30070532	415129	+	X59155 X57303 TSC_hg19_v1_chr13_-_30169595 AK312818 BC063303	514243	-	BC150245|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AB018317|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_001033602|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK301633|MTUS2|23281|microtubule associated tumor suppressor candidate 2##X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	0.0	
chr15	52548629	52548771	reg1008534.p1	11.779	+	AF161352 TSC_hg19_v1_chr15_-_52529707	-18994	-	NM_016194	-65136	-	TSC_hg19_v1_chr15_+_52472257 AF007131	-76365	+	AF272390 BC144611 BC064841 TSC_hg19_v1_chr15_-_52587968 AK301079 AK304136 NM_018728	39234	-	TSC_hg19_v1_chr15_-_52821078 AB290180 AK303660 AK307600 NM_000259 NM_001142495 U90942 Y07759	272556	-	AK123616 TSC_hg19_v1_chr15_-_52861045 AJ223091 CR457132 AK311751	312359	-	AF161352|MYO5C|55930|myosin VC##NM_016194|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973##AF272390|MYO5C|55930|myosin VC##BC144611|MYO5C|55930|myosin VC##BC064841|MYO5C|55930|myosin VC##AK301079|MYO5C|55930|myosin VC##AK304136|MYO5C|55930|myosin VC##NM_018728|MYO5C|55930|myosin VC##AB290180|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK303660|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK307600|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_000259|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_001142495|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##U90942|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##Y07759|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK123616|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AJ223091|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##CR457132|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK311751|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa	0.982231	CTCF.p2:-17:0.982
chr7	12362037	12362166	reg1008291.p1	11.778	+	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	-111176	+	TSC_hg19_v1_chr7_-_11871825 AK092252 AX747433 NM_015204	-490312	-	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	-1348591	+	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	81431	-	NM_001135924	81750	-	AB067492 NM_001112706 AK290363 AK075123 TSC_hg19_v1_chr7_+_12610346 BC021090 AB590413 DQ892033 DQ895224 AF276507	248206	+	NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A##AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains##NM_001135924|VWDE|221806|von Willebrand factor D and EGF domains##AB067492|SCIN|85477|scinderin##NM_001112706|SCIN|85477|scinderin##AK290363|SCIN|85477|scinderin##AK075123|SCIN|85477|scinderin##BC021090|SCIN|85477|scinderin##DQ892033|SCIN|85477|scinderin##DQ895224|SCIN|85477|scinderin##AF276507|SCIN|85477|scinderin	0.984031	CTCF.p2:10:0.984
chr14	23947636	23947782	reg1009486.p1	11.776	+	TSC_hg19_v1_chr14_+_23938911 AK291875 AL050003 BC030817 AK022215 CU689028 EU832521 EU832603	-8796	+	TSC_hg19_v1_chr14_+_23938899 NM_001042635 NM_015514 AK124318	-8818	+	M58018 TSC_hg19_v1_chr14_-_23904870 AK307590 EU747717 NM_000257	-42850	-	BC131533 TSC_hg19_v1_chr14_-_24020861 AB028979 NM_033400	73111	-	TSC_hg19_v1_chr14_+_24025262 NM_001126339 NM_024328 BX161435 AK098604 AK057691 BC002984	77633	+	AK310524 TSC_hg19_v1_chr14_-_24025427	77729	-	AK291875|NGDN|25983|neuroguidin, EIF4E binding protein##AL050003|NGDN|25983|neuroguidin, EIF4E binding protein##BC030817|NGDN|25983|neuroguidin, EIF4E binding protein##AK022215|NGDN|25983|neuroguidin, EIF4E binding protein##EU832521|NGDN|25983|neuroguidin, EIF4E binding protein##EU832603|NGDN|25983|neuroguidin, EIF4E binding protein##NM_001042635|NGDN|25983|neuroguidin, EIF4E binding protein##NM_015514|NGDN|25983|neuroguidin, EIF4E binding protein##AK124318|NGDN|25983|neuroguidin, EIF4E binding protein##M58018|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##AK307590|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##EU747717|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##NM_000257|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##BC131533|ZFHX2|85446|zinc finger homeobox 2##AB028979|ZFHX2|85446|zinc finger homeobox 2##NM_033400|ZFHX2|85446|zinc finger homeobox 2##NM_001126339|THTPA|79178|thiamine triphosphatase##NM_024328|THTPA|79178|thiamine triphosphatase##BX161435|THTPA|79178|thiamine triphosphatase##AK098604|THTPA|79178|thiamine triphosphatase##AK057691|THTPA|79178|thiamine triphosphatase##BC002984|THTPA|79178|thiamine triphosphatase	0.996757	CTCF.p2:-12:0.997
chr17	45820119	45820244	reg1006975.p2	11.776	+	AF093098 NM_013351 AK223634 BC039739 AF241243 AB590854 TSC_hg19_v1_chr17_+_45810959	-9397	+	TSC_hg19_v1_chr17_+_45773425 AB383985	-46732	+	TSC_hg19_v1_chr17_+_45773067 BC111418	-47142	+	BC065482 TSC_hg19_v1_chr17_-_45899130	78943	-	TSC_hg19_v1_chr17_-_45899154 AF323729 AK000267 BC028010 NM_145798 AK289523 AF392446	79004	-	CU677497 CU690922 DQ891139 DQ894318 BC015904 TSC_hg19_v1_chr17_-_45908897 BC039852 AK293624 BC052601 NM_145255 NM_148887	88712	-	AF093098|TBX21|30009|T-box 21##NM_013351|TBX21|30009|T-box 21##AK223634|TBX21|30009|T-box 21##BC039739|TBX21|30009|T-box 21##AF241243|TBX21|30009|T-box 21##BC111418|TBKBP1|9755|TBK1 binding protein 1##BC065482|OSBPL7|114881|oxysterol binding protein-like 7##AF323729|OSBPL7|114881|oxysterol binding protein-like 7##BC028010|OSBPL7|114881|oxysterol binding protein-like 7##NM_145798|OSBPL7|114881|oxysterol binding protein-like 7##AK289523|OSBPL7|114881|oxysterol binding protein-like 7##AF392446|OSBPL7|114881|oxysterol binding protein-like 7##DQ891139|MRPL10|124995|mitochondrial ribosomal protein L10##DQ894318|MRPL10|124995|mitochondrial ribosomal protein L10##BC015904|MRPL10|124995|mitochondrial ribosomal protein L10##BC039852|MRPL10|124995|mitochondrial ribosomal protein L10##AK293624|MRPL10|124995|mitochondrial ribosomal protein L10##BC052601|MRPL10|124995|mitochondrial ribosomal protein L10##NM_145255|MRPL10|124995|mitochondrial ribosomal protein L10##NM_148887|MRPL10|124995|mitochondrial ribosomal protein L10	0.997474	CTCF.p2:3:0.997
chr2	113238722	113238832	reg1007436.p2	11.775	+	NM_005054 U64675 NM_001164463	-47614	-	TSC_hg19_v1_chr2_+_113033193 AK131416	-205575	+	TSC_hg19_v1_chr2_+_113033173 NM_198581	-205616	+	TSC_hg19_v1_chr2_+_113239732 BC036819	949	+	TSC_hg19_v1_chr2_+_113239762 NM_153712	989	+	TSC_hg19_v1_chr2_+_113239813 AB071393 CU691434 DQ894075	1095	+	NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001164463|RGPD8|727851|RANBP2-like and GRIP domain containing 8##AK131416|ZC3H6|376940|zinc finger CCCH-type containing 6##NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6##BC036819|TTL|150465|tubulin tyrosine ligase##NM_153712|TTL|150465|tubulin tyrosine ligase##AB071393|TTL|150465|tubulin tyrosine ligase##DQ894075|TTL|150465|tubulin tyrosine ligase	0.959907	CTCF.p2:-5:0.960
chr10	31040907	31041037	reg1007297.p4	11.774	+	AF139543 BC066294 NM_183058	-122337	-	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-317851	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-318033	+	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	247480	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	279849	-	TSC_hg19_v1_chr10_+_31607451 BX647794	566464	+	AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1	0.014084	
chr12	67835676	67835811	reg1009381.p1	11.774	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-172313	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-172571	+	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	-172641	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	206880	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	717679	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	783809	-	BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26	0.90135	CTCF.p2:7:0.901
chr17	80163857	80163979	reg1007888.p1	11.773	+	TSC_hg19_v1_chr17_-_80056105 BC063242 NM_004104	-107814	-	TSC_hg19_v1_chr17_-_80056081 AB209988 U29344	-107851	-	TSC_hg19_v1_chr17_-_80054282 AY451392 U26644 AB384663	-109646	-	TSC_hg19_v1_chr17_-_80170705 BC040264 BC110997 NM_198082	6817	-	NM_001042422 NM_001206950 TSC_hg19_v1_chr17_+_80186285	22431	+	NM_004207 TSC_hg19_v1_chr17_+_80186920 AK127090 AK223040 U81800	22998	+	BC063242|FASN|2194|fatty acid synthase##NM_004104|FASN|2194|fatty acid synthase##AB209988|FASN|2194|fatty acid synthase##U29344|FASN|2194|fatty acid synthase##AY451392|FASN|2194|fatty acid synthase##U26644|FASN|2194|fatty acid synthase##BC040264|CCDC57|284001|coiled-coil domain containing 57##BC110997|CCDC57|284001|coiled-coil domain containing 57##NM_198082|CCDC57|284001|coiled-coil domain containing 57##NM_001042422|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_001206950|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_004207|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##AK223040|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##U81800|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)	0.0	
chr3	57993953	57994051	reg1006712.p1	11.773	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-250800	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-315263	-	TSC_hg19_v1_chr3_-_57583171 NM_001660	-410812	-	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	145	+	NM_004944	206395	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	229281	+	AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_001660|ARF4|378|ADP-ribosylation factor 4##AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6	0.0	
chr4	182449858	182449998	reg1009114.p1	11.773	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-4086285	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-4086335	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-4086387	-	TSC_hg19_v1_chr4_+_183065111 AK308489	615197	+	NM_001080477 HE578284 HE578285	795226	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	1388602	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.866227	CTCF.p2:0:0.866
chrX	1573211	1573326	reg1006121.p1	11.773	+	AK301844 NM_001173473	-617	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-1467	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-62299	-	BC043610 GQ280263 NM_178129 AK126147	82770	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	137261	+	NM_004043 U11090	141079	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.088506	
chr19	6299914	6300025	reg1008127.p1	11.772	+	TSC_hg19_v1_chr19_-_6279967 D14539 NM_005934	-20004	-	AB463904 TSC_hg19_v1_chr19_-_6279803	-20166	-	TSC_hg19_v1_chr19_-_6199558 AK056073	-100422	-	AF347024 BC112122 BC112124 NM_133492	33631	-	BC002956 NM_006012 TSC_hg19_v1_chr19_+_6361541	61532	+	TSC_hg19_v1_chr19_+_6361559 AK311973 Z50853 EF036491 DQ895823 EU176368	61644	+	D14539|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1##NM_005934|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1##AF347024|ACER1|125981|alkaline ceramidase 1##BC112122|ACER1|125981|alkaline ceramidase 1##BC112124|ACER1|125981|alkaline ceramidase 1##NM_133492|ACER1|125981|alkaline ceramidase 1##BC002956|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##NM_006012|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##AK311973|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##Z50853|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##EF036491|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##DQ895823|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##EU176368|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	1.00936	CTCF.p2:-2:0.998
chr21	47016750	47016880	reg1009189.p1	11.772	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-54483	-	AK303168 NM_001205207	-62281	-	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	-141397	+	TSC_hg19_v1_chr21_+_47063638 AK310131	46814	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	253073	+	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	384870	+	U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1##AK310131|PCBP3|54039|poly(rC) binding protein 3##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1	1.10213	CTCF.p2:0:0.994
chr6	37293647	37293769	reg1007704.p1	11.772	+	TSC_hg19_v1_chr6_+_37252169 BC063523	-41518	+	TSC_hg19_v1_chr6_-_37225916 BC009625 NM_001162900	-67781	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	-68109	+	TSC_hg19_v1_chr6_+_37321758 NM_003958 NM_183078	28050	+	TSC_hg19_v1_chr6_+_37321801 BC007517	28100	+	TSC_hg19_v1_chr6_+_37321829 AB014546 AK222765 AK298319 AK022075 AK308840 AF334675 BT007446 CU675685 DQ890737 DQ893909	28173	+	BC063523|TBC1D22B|55633|TBC1 domain family, member 22B##BC009625|TMEM217|221468|transmembrane protein 217##NM_001162900|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B##NM_003958|RNF8|9025|ring finger protein 8##NM_183078|RNF8|9025|ring finger protein 8##BC007517|RNF8|9025|ring finger protein 8##AB014546|RNF8|9025|ring finger protein 8##AK222765|RNF8|9025|ring finger protein 8##AK298319|RNF8|9025|ring finger protein 8##AK022075|RNF8|9025|ring finger protein 8##AK308840|RNF8|9025|ring finger protein 8##AF334675|RNF8|9025|ring finger protein 8##BT007446|RNF8|9025|ring finger protein 8##DQ890737|RNF8|9025|ring finger protein 8##DQ893909|RNF8|9025|ring finger protein 8	1.570845	CTCF.p2:4:0.999	CTCF.p2:-55:0.572
chr7	128177667	128177795	reg1009238.p1	11.771	+	NM_018396 TSC_hg19_v1_chr7_+_128116813 AK302775 BC107586 AK002212 BC064929 BC121115 BC121116 AK299960	-60894	+	TSC_hg19_v1_chr7_+_128095931 NM_001098786 NM_013332 AF144755 AK024729 AK222583 BC008573 BC001863 BC093742 BC112183	-81765	+	TSC_hg19_v1_chr7_-_128050037 AK092452 BC033622 AK054667 AK122994 NM_000883 NM_001102605 NM_001142576 NM_183243	-127694	-	BC066973 NM_001012454 NM_001128926 BC105729 BC105730 BC105731 BC047310	134615	+	TSC_hg19_v1_chr7_+_128349114 AK093161 AK302221 AX747964 BC040906 AK310426	171396	+	BC032842 AF367470 NM_032599 AK313608 AK310308 BC037248	177710	+	NM_018396|METTL2B|55798|methyltransferase like 2B##AK302775|METTL2B|55798|methyltransferase like 2B##BC107586|METTL2B|55798|methyltransferase like 2B##AK002212|METTL2B|55798|methyltransferase like 2B##BC064929|METTL2B|55798|methyltransferase like 2B##BC121115|METTL2B|55798|methyltransferase like 2B##BC121116|METTL2B|55798|methyltransferase like 2B##AK299960|METTL2B|55798|methyltransferase like 2B##NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated##AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK092452|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC033622|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054667|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK122994|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_000883|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001102605|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142576|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_183243|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC066973|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001012454|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001128926|FAM71F2|346653|family with sequence similarity 71, member F2##BC105729|FAM71F2|346653|family with sequence similarity 71, member F2##BC105730|FAM71F2|346653|family with sequence similarity 71, member F2##BC105731|FAM71F2|346653|family with sequence similarity 71, member F2##BC047310|FAM71F2|346653|family with sequence similarity 71, member F2##AK093161|FAM71F1|84691|family with sequence similarity 71, member F1##AK302221|FAM71F1|84691|family with sequence similarity 71, member F1##BC040906|FAM71F1|84691|family with sequence similarity 71, member F1##AK310426|FAM71F1|84691|family with sequence similarity 71, member F1##BC032842|FAM71F1|84691|family with sequence similarity 71, member F1##AF367470|FAM71F1|84691|family with sequence similarity 71, member F1##NM_032599|FAM71F1|84691|family with sequence similarity 71, member F1##AK313608|FAM71F1|84691|family with sequence similarity 71, member F1##AK310308|FAM71F1|84691|family with sequence similarity 71, member F1##BC037248|FAM71F1|84691|family with sequence similarity 71, member F1	0.995474	CTCF.p2:1:0.995
chr15	90016127	90016249	reg1009253.p1	11.770	+	TSC_hg19_v1_chr15_-_89878042 AK291281	-138145	-	BC050559 BC042571 NM_001126131 NM_002693 X98093 TSC_hg19_v1_chr15_-_89878036	-138167	-	TSC_hg19_v1_chr15_+_89787255 AK055176 BC140769 BC144483 BC004277	-228938	+	CU689056 AY257182 AF193809 NM_016321 BC015461 AK298252 AK298641 AF081497 AK301640 AK313238 BC030965 AK290899 AK310222	23607	-	TSC_hg19_v1_chr15_+_90118742 GQ227787 NM_152259	102590	+	TSC_hg19_v1_chr15_-_90198681 BC042063 NM_198525	182432	-	AK291281|POLG|5428|polymerase (DNA directed), gamma##BC050559|POLG|5428|polymerase (DNA directed), gamma##BC042571|POLG|5428|polymerase (DNA directed), gamma##NM_001126131|POLG|5428|polymerase (DNA directed), gamma##NM_002693|POLG|5428|polymerase (DNA directed), gamma##X98093|POLG|5428|polymerase (DNA directed), gamma##AK055176|FANCI|55215|Fanconi anemia, complementation group I##BC140769|FANCI|55215|Fanconi anemia, complementation group I##BC144483|FANCI|55215|Fanconi anemia, complementation group I##BC004277|FANCI|55215|Fanconi anemia, complementation group I##AY257182|RHCG|51458|Rh family, C glycoprotein##AF193809|RHCG|51458|Rh family, C glycoprotein##NM_016321|RHCG|51458|Rh family, C glycoprotein##BC015461|RHCG|51458|Rh family, C glycoprotein##AK298252|RHCG|51458|Rh family, C glycoprotein##AK298641|RHCG|51458|Rh family, C glycoprotein##AF081497|RHCG|51458|Rh family, C glycoprotein##AK301640|RHCG|51458|Rh family, C glycoprotein##AK313238|RHCG|51458|Rh family, C glycoprotein##BC030965|RHCG|51458|Rh family, C glycoprotein##AK290899|RHCG|51458|Rh family, C glycoprotein##AK310222|RHCG|51458|Rh family, C glycoprotein##GQ227787|C15orf42|90381|chromosome 15 open reading frame 42##NM_152259|C15orf42|90381|chromosome 15 open reading frame 42##BC042063|KIF7|374654|kinesin family member 7##NM_198525|KIF7|374654|kinesin family member 7	0.96147	CTCF.p2:11:0.961
chr10	33619537	33619677	reg1007795.p1	11.769	+	TSC_hg19_v1_chr10_-_33247203 NM_002211	-372370	-	TSC_hg19_v1_chr10_-_33247146 BC020057 AK291697 BX537407	-372468	-	TSC_hg19_v1_chr10_-_33246826 NM_133376	-372773	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	3846	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	4207	-	TSC_hg19_v1_chr10_-_33623996 BX648025	4391	-	NM_002211|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BC020057|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##AK291697|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BX537407|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##NM_133376|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##BX648025|NRP1|8829|neuropilin 1	0.995554	CTCF.p2:-12:0.996
chr1	182415288	182415422	reg1008574.p1	11.769	+	AJ515384 NM_172000	-45605	-	TSC_hg19_v1_chr1_-_182361366 AK122784 NM_001033044 NM_002065	-54015	-	TSC_hg19_v1_chr1_-_182360928 AY947343 BC018992 BC011700 X59834 BC010037 BC011852 Y00387 BC051726 BX537384	-54420	-	NM_001137669 AK302768 BC142944 AL136902	3918	+	AK315231 BC090934 TSC_hg19_v1_chr1_-_182558392 CR627369 NM_021133	143028	-	CU675308 TSC_hg19_v1_chr1_+_182569465	154091	+	AJ515384|TEDDM1|127670|transmembrane epididymal protein 1##NM_172000|TEDDM1|127670|transmembrane epididymal protein 1##AK122784|GLUL|2752|glutamate-ammonia ligase##NM_001033044|GLUL|2752|glutamate-ammonia ligase##NM_002065|GLUL|2752|glutamate-ammonia ligase##AY947343|GLUL|2752|glutamate-ammonia ligase##BC018992|GLUL|2752|glutamate-ammonia ligase##BC011700|GLUL|2752|glutamate-ammonia ligase##X59834|GLUL|2752|glutamate-ammonia ligase##BC010037|GLUL|2752|glutamate-ammonia ligase##BC011852|GLUL|2752|glutamate-ammonia ligase##Y00387|GLUL|2752|glutamate-ammonia ligase##BC051726|GLUL|2752|glutamate-ammonia ligase##BX537384|GLUL|2752|glutamate-ammonia ligase##NM_001137669|RGSL1|353299|regulator of G-protein signaling like 1##AK302768|RGSL1|353299|regulator of G-protein signaling like 1##BC142944|RGSL1|353299|regulator of G-protein signaling like 1##AL136902|RGSL1|353299|regulator of G-protein signaling like 1##AK315231|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##BC090934|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##CR627369|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##NM_021133|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)	0.947811	CTCF.p2:-4:0.948
chr16	82297233	82297371	reg1009489.p1	11.768	+	CU689076 AB463897 TSC_hg19_v1_chr16_-_82203821 BC005242 BC031017 BC011020 BC029395 X98263 AK222667 AK314163 NM_005792	-93492	-	TSC_hg19_v1_chr16_+_82068989 DQ893100 DQ896372	-228309	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	-228370	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	363092	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	363287	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	363367	+	BC005242|MPHOSPH6|10200|M-phase phosphoprotein 6##BC031017|MPHOSPH6|10200|M-phase phosphoprotein 6##BC011020|MPHOSPH6|10200|M-phase phosphoprotein 6##BC029395|MPHOSPH6|10200|M-phase phosphoprotein 6##X98263|MPHOSPH6|10200|M-phase phosphoprotein 6##AK222667|MPHOSPH6|10200|M-phase phosphoprotein 6##AK314163|MPHOSPH6|10200|M-phase phosphoprotein 6##NM_005792|MPHOSPH6|10200|M-phase phosphoprotein 6##DQ893100|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##DQ896372|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)	0.996718	CTCF.p2:0:0.997
chrX	9853324	9853460	reg1009797.p1	11.768	+	BC140866 TSC_hg19_v1_chrX_+_9754543	-98849	+	TSC_hg19_v1_chrX_+_9754468 NM_001649 X83543	-98912	+	Z48804 BC015657 BC068977 NM_000273	-119432	-	NM_001195081	82005	+	BC098455 NM_015691	130401	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	271662	+	BC140866|SHROOM2|357|shroom family member 2##NM_001649|SHROOM2|357|shroom family member 2##X83543|SHROOM2|357|shroom family member 2##Z48804|GPR143|4935|G protein-coupled receptor 143##BC015657|GPR143|4935|G protein-coupled receptor 143##BC068977|GPR143|4935|G protein-coupled receptor 143##NM_000273|GPR143|4935|G protein-coupled receptor 143##NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4	0.676518	CTCF.p2:-6:0.677
chr1	116307322	116307424	reg1007071.p1	11.767	+	AB057596 NM_001172412	-122124	+	NM_001172411 NM_138959 BC065272 AF481859	-122781	+	BC032517 NM_002506 X52599	-426520	-	CU692536 DQ893219 DQ896548 D55655 AK225959 TSC_hg19_v1_chr1_-_116311307	3861	-	TSC_hg19_v1_chr1_-_116311336 AK295502 BC022288 AK313041	3978	-	AK129891 TSC_hg19_v1_chr1_-_116311410 NM_001232 AK293595	4043	-	AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##DQ893219|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ896548|CASQ2|845|calsequestrin 2 (cardiac muscle)##D55655|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK225959|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK295502|CASQ2|845|calsequestrin 2 (cardiac muscle)##BC022288|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK313041|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK129891|CASQ2|845|calsequestrin 2 (cardiac muscle)##NM_001232|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK293595|CASQ2|845|calsequestrin 2 (cardiac muscle)	0.700242	CTCF.p2:17:0.700
chr1	147364966	147365091	reg1010088.p1	11.767	+	NM_005266	-119545	-	BC013313 NM_181703	-132330	-	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	-222534	-	NM_005267	9917	+	TSC_hg19_v1_chr1_+_147400532 AK021758 NM_016334 AL133020 AY358966 AB097024 AB097025 AK223223 AK299995 AK302266 BC067816 AF132947 U78723	35494	+	TSC_hg19_v1_chr1_+_147400563 BC146880 AK316371 BC003187 AB528816 DQ890650 DQ893830 BT006679	35573	+	NM_005266|GJA5|2702|gap junction protein, alpha 5, 40kDa##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa##AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa##AK021758|GPR89A|653519|G protein-coupled receptor 89A##NM_016334|GPR89B|51463|G protein-coupled receptor 89B##AL133020|GPR89B|51463|G protein-coupled receptor 89B##AY358966|GPR89A|653519|G protein-coupled receptor 89A##AB097024|GPR89A|653519|G protein-coupled receptor 89A##AB097025|GPR89A|653519|G protein-coupled receptor 89A##AK223223|GPR89A|653519|G protein-coupled receptor 89A##AK299995|GPR89A|653519|G protein-coupled receptor 89A##AK302266|GPR89B|51463|G protein-coupled receptor 89B##BC067816|GPR89A|653519|G protein-coupled receptor 89A##AF132947|GPR89A|653519|G protein-coupled receptor 89A##U78723|GPR89B|51463|G protein-coupled receptor 89B##BC146880|GPR89A|653519|G protein-coupled receptor 89A##AK316371|GPR89A|653519|G protein-coupled receptor 89A##BC003187|GPR89A|653519|G protein-coupled receptor 89A##DQ890650|GPR89B|51463|G protein-coupled receptor 89B##DQ893830|GPR89A|653519|G protein-coupled receptor 89A##BT006679|GPR89A|653519|G protein-coupled receptor 89A	0.996466	CTCF.p2:0:0.996
chr11	49547927	49548062	reg1008637.p1	11.767	+	TSC_hg19_v1_chr11_-_49230053 DQ088979 AF176574 BC025672 AK312366 AK295368 AK295470 AK300532 M99487 NM_001014986 NM_001193471 NM_001193472 NM_001193473 NM_004476 S76978	-317887	-	AJ007318 EF488811 TSC_hg19_v1_chr11_-_49229929 AY101595 DQ891167 DQ894349 EF488812	-318073	-	NM_001206631	-467331	-	BC137005 NM_001001955	425948	+	BC136850 BC136851 NM_001005270	456076	-	BC140750 NM_001005272	1864453	-	DQ088979|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AF176574|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##BC025672|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK312366|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK295368|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK295470|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK300532|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##M99487|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001014986|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193471|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193472|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193473|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_004476|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##S76978|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AJ007318|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##EF488811|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AY101595|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##DQ891167|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##DQ894349|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##EF488812|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001206631|TRIM64C|646754|tripartite motif containing 64C##BC137005|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13##NM_001001955|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13##BC136850|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC136851|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##NM_001005270|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC140750|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##NM_001005272|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5	1.239811	CTCF.p2:3:0.976	CTCF.p2:-50:0.264
chr1	49283312	49283426	reg1008430.p1	11.767	+	BC011804 AK021650 CU675869 NM_024603 BC007932	-40872	-	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	-345524	-	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	-345691	-	TSC_hg19_v1_chr1_-_50489560 BC035739 AK094826 AK294394	1206178	-	TSC_hg19_v1_chr1_-_50489627 AK294633 AK296221 NM_032785	1206278	-	AK297338 NM_001144777	1230316	+	BC011804|BEND5|79656|BEN domain containing 5##AK021650|BEND5|79656|BEN domain containing 5##NM_024603|BEND5|79656|BEN domain containing 5##BC007932|BEND5|79656|BEN domain containing 5##AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##BC035739|AGBL4|84871|ATP/GTP binding protein-like 4##AK094826|AGBL4|84871|ATP/GTP binding protein-like 4##AK294394|AGBL4|84871|ATP/GTP binding protein-like 4##AK294633|AGBL4|84871|ATP/GTP binding protein-like 4##AK296221|AGBL4|84871|ATP/GTP binding protein-like 4##NM_032785|AGBL4|84871|ATP/GTP binding protein-like 4##AK297338|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_001144777|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	0.108585	
chr19	39964902	39965020	reg1006444.p1	11.767	+	TSC_hg19_v1_chr19_+_39936289 NM_003169 AF040253	-28658	+	TSC_hg19_v1_chr19_+_39936253 BC024203 AB209257	-28700	+	TSC_hg19_v1_chr19_+_39936247 U56402	-28716	+	NM_001001563 BC121146 BC121147	6126	+	TSC_hg19_v1_chr19_+_39971479 BC050082	6505	+	TSC_hg19_v1_chr19_+_39971488 AY551341	6529	+	NM_003169|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##AF040253|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##BC024203|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##AB209257|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##U56402|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##NM_001001563|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##BC121146|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##BC121147|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##BC050082|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##AY551341|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)	0.999718	CTCF.p2:0:1.000
chr8	75765775	75765890	reg1007179.p1	11.767	+	CR749657 NM_015886	-29061	+	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	-503142	+	BX537756 BC139832 BC098299 BC098314 BC099736 BC113856 BC114464 NM_020647 BC140875 BC140876	-532304	-	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	131077	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	554356	+	BX571750 NM_004133 EU832451 HQ692842	686382	+	CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15##AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BX537756|JPH1|56704|junctophilin 1##BC139832|JPH1|56704|junctophilin 1##BC098299|JPH1|56704|junctophilin 1##BC098314|JPH1|56704|junctophilin 1##BC099736|JPH1|56704|junctophilin 1##BC113856|JPH1|56704|junctophilin 1##BC114464|JPH1|56704|junctophilin 1##NM_020647|JPH1|56704|junctophilin 1##BC140875|JPH1|56704|junctophilin 1##BC140876|JPH1|56704|junctophilin 1##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma	0.999809	CTCF.p2:-1:1.000
chr12	116674093	116674206	reg1004709.p2	11.766	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-1552009	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1827931	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1830225	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	40801	-	TSC_hg19_v1_chr12_-_116715263 AY338463	41011	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	297080	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.292582	CTCF.p2:5:0.293
chr1	221608877	221609013	reg1009010.p1	11.766	+	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	-555846	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	-556031	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	-556184	+	NM_144728	301856	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	306463	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	306485	-	DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##NM_144728|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10	0.263347	CTCF.p2:6:0.263
chr19	33675266	33675373	reg1006154.p2	11.766	+	BC031227 NM_173479 AB527326	-52283	+	BC006108 NM_018025	-103534	+	AF423421 AJ347750 DQ892111 DQ895305 TSC_hg19_v1_chr19_-_33555795 AF268032 AK098246 AK300775 AK315105 BC036447 NM_033103	-119529	-	TSC_hg19_v1_chr19_+_33685155 AK129963	9849	+	AB009462 NM_002333 BC007408 TSC_hg19_v1_chr19_+_33685676 EU176387 AK296536	10284	+	TSC_hg19_v1_chr19_+_33697959 AF085860	22677	+	BC031227|WDR88|126248|WD repeat domain 88##NM_173479|WDR88|126248|WD repeat domain 88##BC006108|GPATCH1|55094|G patch domain containing 1##NM_018025|GPATCH1|55094|G patch domain containing 1##AF423421|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AJ347750|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ892111|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ895305|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AF268032|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK098246|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK300775|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK315105|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##BC036447|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##NM_033103|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK129963|LRP3|4037|low density lipoprotein receptor-related protein 3##AB009462|LRP3|4037|low density lipoprotein receptor-related protein 3##NM_002333|LRP3|4037|low density lipoprotein receptor-related protein 3##BC007408|LRP3|4037|low density lipoprotein receptor-related protein 3##EU176387|LRP3|4037|low density lipoprotein receptor-related protein 3##AK296536|LRP3|4037|low density lipoprotein receptor-related protein 3##AF085860|LRP3|4037|low density lipoprotein receptor-related protein 3	0.471998	CTCF.p2:8:0.472
chr2	139131656	139131801	reg1007369.p2	11.766	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	-409794	+	NM_001080427	-1383267	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-1608612	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	127665	+	TSC_hg19_v1_chr2_+_139259500 AK021919	127762	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	406078	-	NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2	0.897399	CTCF.p2:-9:0.897
chr7	40092183	40092325	reg1006998.p1	11.766	+	AJ297709 AJ297710 TSC_hg19_v1_chr7_+_39990171	-102113	+	TSC_hg19_v1_chr7_+_39989958 AK092534 NM_003718 NM_031267	-102295	+	BC064414 TSC_hg19_v1_chr7_+_39989879	-102370	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	81877	-	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	82277	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	82355	+	AJ297709|CDK13|8621|cyclin-dependent kinase 13##AJ297710|CDK13|8621|cyclin-dependent kinase 13##AK092534|CDK13|8621|cyclin-dependent kinase 13##NM_003718|CDK13|8621|cyclin-dependent kinase 13##NM_031267|CDK13|8621|cyclin-dependent kinase 13##BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10	0.989065	CTCF.p2:18:0.989
chr6	78167591	78167724	reg1009892.p1	11.765	+	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	-1385358	-	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-1708648	+	TSC_hg19_v1_chr6_+_76458926 NM_004999 BX647397 BC012598	-1708741	+	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	5492	-	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	1409598	+	BC064611 TSC_hg19_v1_chr6_-_79675737 AK000712	1508095	-	HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_004999|MYO6|4646|myosin VI##BX647397|MYO6|4646|myosin VI##BC012598|MYO6|4646|myosin VI##BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC064611|PHIP|55023|pleckstrin homology domain interacting protein##AK000712|PHIP|55023|pleckstrin homology domain interacting protein	0.986895	CTCF.p2:-1:0.987
chr12	32455280	32455389	reg1005047.p1	11.764	+	AK313430 AK290188 NM_001003398 NM_001714 U90028 BC136372 TSC_hg19_v1_chr12_+_32260263	-195161	+	TSC_hg19_v1_chr12_+_32259750 BC010091	-195620	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	-342940	+	BC039708 BC063403 NM_139241 BC096746 AK057294 BC045552	199705	+	TSC_hg19_v1_chr12_+_32687260 AK303334	231929	+	TSC_hg19_v1_chr12_+_32832187 AK302565 NM_005690 NM_012062 NM_012063 AK311606	376823	+	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)##U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK303334|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK302565|DNM1L|10059|dynamin 1-like##NM_005690|DNM1L|10059|dynamin 1-like##NM_012062|DNM1L|10059|dynamin 1-like##NM_012063|DNM1L|10059|dynamin 1-like##AK311606|DNM1L|10059|dynamin 1-like	0.0	
chr14	105818697	105818804	reg1007124.p2	11.764	+	AK295579 AK294899 NM_001242786 NM_001242787	-36881	-	TSC_hg19_v1_chr14_+_105781197 BC050351 AB385359	-37488	+	TSC_hg19_v1_chr14_+_105781053 AB011174 BC065220	-37710	+	TSC_hg19_v1_chr14_+_105864874 NM_001195082	46135	+	TSC_hg19_v1_chr14_+_105865463 AK124813	46782	+	AK123017 TSC_hg19_v1_chr14_-_105886160	67385	-	AK295579|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##AK294899|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_001242786|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_001242787|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##BC050351|PACS2|23241|phosphofurin acidic cluster sorting protein 2##AB011174|PACS2|23241|phosphofurin acidic cluster sorting protein 2##BC065220|PACS2|23241|phosphofurin acidic cluster sorting protein 2##NM_001195082|TEX22|647310|testis expressed 22##AK123017|LOC100507437|100507437|uncharacterized LOC100507437	0.991226	CTCF.p2:8:0.991
chr1	7130570	7130696	reg1009308.p1	11.764	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-285142	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-368702	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-368751	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	700743	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	713776	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	714192	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.999298	CTCF.p2:13:0.999
chr15	45691938	45692055	reg1007217.p2	11.763	+	TSC_hg19_v1_chr15_-_45670958 NM_001482	-21029	-	TSC_hg19_v1_chr15_-_45670743 CU678590 S68805 BC004141 AK098055 AK223585 AK294995 AK298350	-21257	-	AK222709 NM_004212 U84392 AK291974	-147555	+	NM_024063 TSC_hg19_v1_chr15_+_45694551 AK291457 AK023232 AK225463 BC051861 BC000981 AK022348	2556	+	NM_032413 NM_197955 TSC_hg19_v1_chr15_+_45722808 AF228422 AK026298 BC021173 AB026707	30801	+	BC026089 NM_013309 TSC_hg19_v1_chr15_-_45815017	123014	-	NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK222709|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##NM_004212|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##U84392|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK291974|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##NM_024063|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK291457|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK023232|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK225463|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC051861|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC000981|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK022348|SPATA5L1|79029|spermatogenesis associated 5-like 1##NM_032413|C15orf48|84419|chromosome 15 open reading frame 48##NM_197955|C15orf48|84419|chromosome 15 open reading frame 48##AF228422|C15orf48|84419|chromosome 15 open reading frame 48##AK026298|C15orf48|84419|chromosome 15 open reading frame 48##BC021173|C15orf48|84419|chromosome 15 open reading frame 48##AB026707|C15orf48|84419|chromosome 15 open reading frame 48##BC026089|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##NM_013309|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4	0.425906	CTCF.p2:14:0.426
chr13	27281993	27282084	reg1006413.p1	11.762	+	TSC_hg19_v1_chr13_+_27131892 AF454702	-150136	+	TSC_hg19_v1_chr13_+_27131854 AK289845 BC050283 NM_006646	-150204	+	BC069634 BC104492 BC105950 BC107601 NM_001260 X85753 AY702976 CU686950	-453272	+	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	52815	-	DQ894074 AF022789 TSC_hg19_v1_chr13_-_27745948 AK289685	463823	-	TSC_hg19_v1_chr13_-_27746003 BC026072 NM_182488	464048	-	AF454702|WASF3|10810|WAS protein family, member 3##AK289845|WASF3|10810|WAS protein family, member 3##BC050283|WASF3|10810|WAS protein family, member 3##NM_006646|WASF3|10810|WAS protein family, member 3##BC069634|CDK8|1024|cyclin-dependent kinase 8##BC104492|CDK8|1024|cyclin-dependent kinase 8##BC105950|CDK8|1024|cyclin-dependent kinase 8##BC107601|CDK8|1024|cyclin-dependent kinase 8##NM_001260|CDK8|1024|cyclin-dependent kinase 8##X85753|CDK8|1024|cyclin-dependent kinase 8##AY702976|CDK8|1024|cyclin-dependent kinase 8##AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12##DQ894074|USP12|219333|ubiquitin specific peptidase 12##AF022789|USP12|219333|ubiquitin specific peptidase 12##AK289685|USP12|219333|ubiquitin specific peptidase 12##BC026072|USP12|219333|ubiquitin specific peptidase 12##NM_182488|USP12|219333|ubiquitin specific peptidase 12	0.278035	CTCF.p2:-1:0.278
chr15	83917282	83917402	reg1009056.p1	11.762	+	BC040554 TSC_hg19_v1_chr15_-_83876823	-40546	-	AB529208 TSC_hg19_v1_chr15_-_83876576 BC015483 AB029156 AF110642 AF151900 AK001280 NM_016073	-40928	-	BC063487 NM_001144903 NM_023003 AF255922 TSC_hg19_v1_chr15_+_83776396 AK223246 AK292100 BC032007 CU687748 DQ021909 AK295568	-140964	+	TSC_hg19_v1_chr15_-_83952207 AK302992	34860	-	L03427 NM_001717 TSC_hg19_v1_chr15_-_83953480	36136	-	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	198718	+	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##BC063487|TM6SF1|53346|transmembrane 6 superfamily member 1##NM_001144903|TM6SF1|53346|transmembrane 6 superfamily member 1##NM_023003|TM6SF1|53346|transmembrane 6 superfamily member 1##AF255922|TM6SF1|53346|transmembrane 6 superfamily member 1##AK223246|TM6SF1|53346|transmembrane 6 superfamily member 1##AK292100|TM6SF1|53346|transmembrane 6 superfamily member 1##BC032007|TM6SF1|53346|transmembrane 6 superfamily member 1##DQ021909|TM6SF1|53346|transmembrane 6 superfamily member 1##AK295568|TM6SF1|53346|transmembrane 6 superfamily member 1##AK302992|BNC1|646|basonuclin 1##L03427|BNC1|646|basonuclin 1##NM_001717|BNC1|646|basonuclin 1##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3	0.998664	CTCF.p2:-6:0.999
chr15	52068501	52068622	reg1005880.p1	11.761	+	TSC_hg19_v1_chr15_+_52043793 NM_001142885 NM_014548 BC036184 BC064961 BC052749 AF177169 AK293823 AK292733	-24738	+	NM_001143917 TSC_hg19_v1_chr15_-_52043732 BC022075	-24846	-	TSC_hg19_v1_chr15_-_52030323 AY125955 BC033515 NM_153374	-38302	-	TSC_hg19_v1_chr15_+_52121827 NM_014547 AK312569	53266	+	TSC_hg19_v1_chr15_+_52121876 BX647277 AF177171 BC020542	53458	+	TSC_hg19_v1_chr15_+_52201590 AK025704	133049	+	NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)##NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)##BC036184|TMOD2|29767|tropomodulin 2 (neuronal)##BC064961|TMOD2|29767|tropomodulin 2 (neuronal)##AF177169|TMOD2|29767|tropomodulin 2 (neuronal)##AK293823|TMOD2|29767|tropomodulin 2 (neuronal)##AK292733|TMOD2|29767|tropomodulin 2 (neuronal)##NM_001143917|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##BC022075|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##AY125955|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##BC033515|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##NM_153374|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##NM_014547|TMOD3|29766|tropomodulin 3 (ubiquitous)##AK312569|TMOD3|29766|tropomodulin 3 (ubiquitous)##BX647277|TMOD3|29766|tropomodulin 3 (ubiquitous)##AF177171|TMOD3|29766|tropomodulin 3 (ubiquitous)##BC020542|TMOD3|29766|tropomodulin 3 (ubiquitous)##AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)	0.140085	
chr17	30936231	30936364	reg1008440.p1	11.761	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-121537	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-121700	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-122226	+	CU688936 AB385376 AB018270 BC146763 NM_015194	267598	-	TSC_hg19_v1_chr17_-_31204141 AK127942	267826	-	TSC_hg19_v1_chr17_-_31204196 BC030602	267916	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.928619	CTCF.p2:5:0.929
chr22	46375033	46375166	reg1005284.p2	11.761	+	AF416743 NM_058238 TSC_hg19_v1_chr22_-_46373045	-2070	-	CR456568 TSC_hg19_v1_chr22_+_46067931 AK095309 CR457381 DQ893240 DQ896570	-307182	+	AK025734 TSC_hg19_v1_chr22_+_46067746 AF119662 BC007508	-307343	+	TSC_hg19_v1_chr22_+_46449736 BC036832	74625	+	AB528792 AK001807 NM_018280 TSC_hg19_v1_chr22_-_46450052	74913	-	NM_001001928 NM_005036 AY258330 TSC_hg19_v1_chr22_+_46546555 AY258328	171431	+	AF416743|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_058238|WNT7B|7477|wingless-type MMTV integration site family, member 7B##CR456568|ATXN10|25814|ataxin 10##AK095309|ATXN10|25814|ataxin 10##CR457381|ATXN10|25814|ataxin 10##DQ893240|ATXN10|25814|ataxin 10##DQ896570|ATXN10|25814|ataxin 10##AK025734|ATXN10|25814|ataxin 10##AF119662|ATXN10|25814|ataxin 10##BC007508|ATXN10|25814|ataxin 10##AK001807|C22orf26|55267|chromosome 22 open reading frame 26##NM_018280|C22orf26|55267|chromosome 22 open reading frame 26##NM_001001928|PPARA|5465|peroxisome proliferator-activated receptor alpha##NM_005036|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258330|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258328|PPARA|5465|peroxisome proliferator-activated receptor alpha	0.950894	CTCF.p2:5:0.951
chr2	218578320	218578439	reg1007299.p1	11.760	+	BC029516 NM_003284	-853598	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-1018119	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-1018813	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	230402	-	AK001785 TSC_hg19_v1_chr2_-_218843551	265167	-	TSC_hg19_v1_chr2_-_218867719 AK309785	289344	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.970519	CTCF.p2:17:0.971
chr1	10437581	10437700	reg1008560.p1	11.759	+	TSC_hg19_v1_chr1_+_10270680 AK308121 NM_015074 NM_183416 AF257176 AY139835	-166869	+	AB014584 TSC_hg19_v1_chr1_+_10093218	-344427	+	TSC_hg19_v1_chr1_+_10093015 AB028839 NM_001105562 NM_006048	-344625	+	NM_002631 TSC_hg19_v1_chr1_+_10459125 AK300952 AK290404 AK296889 AK303898 AK304423 BC000368 U30255 AB463169 AK298830	21489	+	AF521016 NM_198544 NM_199006 NM_199294	52518	+	TSC_hg19_v1_chr1_+_10490434 AF516753 BC029430	52853	+	AK308121|KIF1B|23095|kinesin family member 1B##NM_015074|KIF1B|23095|kinesin family member 1B##NM_183416|KIF1B|23095|kinesin family member 1B##AF257176|KIF1B|23095|kinesin family member 1B##AY139835|KIF1B|23095|kinesin family member 1B##AB014584|UBE4B|10277|ubiquitination factor E4B##AB028839|UBE4B|10277|ubiquitination factor E4B##NM_001105562|UBE4B|10277|ubiquitination factor E4B##NM_006048|UBE4B|10277|ubiquitination factor E4B##NM_002631|PGD|5226|phosphogluconate dehydrogenase##AK300952|PGD|5226|phosphogluconate dehydrogenase##AK290404|PGD|5226|phosphogluconate dehydrogenase##AK296889|PGD|5226|phosphogluconate dehydrogenase##AK303898|PGD|5226|phosphogluconate dehydrogenase##AK304423|PGD|5226|phosphogluconate dehydrogenase##BC000368|PGD|5226|phosphogluconate dehydrogenase##U30255|PGD|5226|phosphogluconate dehydrogenase##AK298830|PGD|5226|phosphogluconate dehydrogenase##AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1##AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough##BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1	0.0	
chr1	247536145	247536262	reg1007820.p2	11.759	+	TSC_hg19_v1_chr1_-_247494994 BC007263 NM_032752	-41186	-	BC126341 BC126367 NM_173858	-116880	+	BC032514 BC096349 BC096350 BC096351 BC099661 BC013605 AK054647 NM_001243740 NM_003431	-200919	-	AK314998 NM_001079821 NM_001127461 TSC_hg19_v1_chr1_+_247579474 AB208891	43266	+	AF410477 AF427617 NM_001127462 NM_001243133 NM_004895 NM_183395	45147	+	NM_001004492 BC137181 BC137205	79092	-	BC007263|ZNF496|84838|zinc finger protein 496##NM_032752|ZNF496|84838|zinc finger protein 496##BC126341|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC126367|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##NM_173858|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC032514|ZNF124|7678|zinc finger protein 124##BC096349|ZNF124|7678|zinc finger protein 124##BC096350|ZNF124|7678|zinc finger protein 124##BC096351|ZNF124|7678|zinc finger protein 124##BC099661|ZNF124|7678|zinc finger protein 124##BC013605|ZNF124|7678|zinc finger protein 124##AK054647|ZNF124|7678|zinc finger protein 124##NM_001243740|ZNF124|7678|zinc finger protein 124##NM_003431|ZNF124|7678|zinc finger protein 124##AK314998|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001079821|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127461|NLRP3|114548|NLR family, pyrin domain containing 3##AB208891|NLRP3|114548|NLR family, pyrin domain containing 3##AF410477|NLRP3|114548|NLR family, pyrin domain containing 3##AF427617|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127462|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001243133|NLRP3|114548|NLR family, pyrin domain containing 3##NM_004895|NLRP3|114548|NLR family, pyrin domain containing 3##NM_183395|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001004492|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##BC137181|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##BC137205|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11	0.999869	CTCF.p2:0:1.000
chrX	153977117	153977247	reg1009433.p1	11.759	+	AJ012833 AM393026 AM393495 AM393696 AM393839 AB463462 BC002833 BC113998 BC114933 BC128045 AJ223041 AY679088 AY679089 AJ012834 AJ012835 AJ223040 NM_020994 NM_172377	-95378	-	AJ275978 AJ003149 BC130362 BC130364 NM_001327 NM_139250 U87459	-129727	-	NM_001327 NM_139250 U87459 BC130362 BC130364 AJ003149 AJ275978	-163700	+	TSC_hg19_v1_chrX_-_153979326 AB463697 AK126283 AY057989 NM_001081573 NM_080612 AK307927	2115	-	TSC_hg19_v1_chrX_-_153979807 AL832051 DQ656063	2644	-	TSC_hg19_v1_chrX_+_153991038 NM_001142463 NM_001363 BC009928	13846	+	AJ012833|CTAG2|30848|cancer/testis antigen 2##AM393026|CTAG2|30848|cancer/testis antigen 2##AM393495|CTAG2|30848|cancer/testis antigen 2##AM393696|CTAG2|30848|cancer/testis antigen 2##AM393839|CTAG2|30848|cancer/testis antigen 2##BC002833|CTAG2|30848|cancer/testis antigen 2##BC113998|CTAG2|30848|cancer/testis antigen 2##BC114933|CTAG2|30848|cancer/testis antigen 2##BC128045|CTAG2|30848|cancer/testis antigen 2##AJ223041|CTAG2|30848|cancer/testis antigen 2##AY679088|CTAG2|30848|cancer/testis antigen 2##AY679089|CTAG2|30848|cancer/testis antigen 2##AJ012834|CTAG2|30848|cancer/testis antigen 2##AJ012835|CTAG2|30848|cancer/testis antigen 2##AJ223040|CTAG2|30848|cancer/testis antigen 2##NM_020994|CTAG2|30848|cancer/testis antigen 2##NM_172377|CTAG2|30848|cancer/testis antigen 2##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AK126283|GAB3|139716|GRB2-associated binding protein 3##AY057989|GAB3|139716|GRB2-associated binding protein 3##NM_001081573|GAB3|139716|GRB2-associated binding protein 3##NM_080612|GAB3|139716|GRB2-associated binding protein 3##AK307927|GAB3|139716|GRB2-associated binding protein 3##AL832051|GAB3|139716|GRB2-associated binding protein 3##NM_001142463|DKC1|1736|dyskeratosis congenita 1, dyskerin##NM_001363|DKC1|1736|dyskeratosis congenita 1, dyskerin##BC009928|DKC1|1736|dyskeratosis congenita 1, dyskerin	0.920933	CTCF.p2:5:0.921
chr6	20528686	20528821	reg1007557.p1	11.758	+	CR749285 NM_001243076	-124720	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-126650	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	-316081	-	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	5970	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	1065619	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	1137906	+	CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340	0.909264	CTCF.p2:0:0.909
chr6	25018314	25018436	reg1007336.p1	11.758	+	TSC_hg19_v1_chr6_-_24936189 AK299047	-82192	-	AB002384 NM_014722	-107181	-	U49187 AK300138 BC001232 NM_015864	-140858	-	TSC_hg19_v1_chr6_+_25279316 BC040903	260943	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	261283	+	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	261519	+	AK299047|FAM65B|9750|family with sequence similarity 65, member B##AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A	0.915758	CTCF.p2:25:0.916
chr11	130304489	130304620	reg1005349.p1	11.757	+	TSC_hg19_v1_chr11_-_130298505 NM_007037	-6034	-	BC113874 TSC_hg19_v1_chr11_-_130298419 BC089435	-6192	-	TSC_hg19_v1_chr11_-_130184509 AK314701 BC030580 BC049375 BC071729 NM_014155	-120022	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	14108	+	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	481791	-	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	481834	-	NM_007037|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC113874|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC089435|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##AK314701|ZBTB44|29068|zinc finger and BTB domain containing 44##BC030580|ZBTB44|29068|zinc finger and BTB domain containing 44##BC049375|ZBTB44|29068|zinc finger and BTB domain containing 44##BC071729|ZBTB44|29068|zinc finger and BTB domain containing 44##NM_014155|ZBTB44|29068|zinc finger and BTB domain containing 44##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19	0.997633	CTCF.p2:-2:0.998
chr2	7224135	7224270	reg1009181.p1	11.757	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-166615	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-206339	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-217499	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1598001	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1753517	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1919619	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.853568	CTCF.p2:3:0.854
chr11	19579365	19579481	reg1007992.p1	11.756	+	AB063115 NM_001111018 AJ488205	-207108	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-316222	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-316948	-	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	155443	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	464965	+	TSC_hg19_v1_chr11_+_20049136 AK307574	469709	+	AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2	0.960752	CTCF.p2:-13:0.961
chr3	125655144	125655259	reg1006929.p2	11.756	+	TSC_hg19_v1_chr3_+_125635451 BC032772 BC041080	-19745	+	TSC_hg19_v1_chr3_-_125314371 NM_022776	-340828	-	TSC_hg19_v1_chr3_-_125239050 NM_003794	-416148	-	BC073816 NM_001015050 NM_001195223	682	-	AF231410 NM_001012337 BC141849 AK302014	32853	+	AK093380 AX748089 NM_001008487	120412	-	BC032772|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC041080|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##NM_022776|OSBPL11|114885|oxysterol binding protein-like 11##NM_003794|SNX4|8723|sorting nexin 4##BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like##AF231410|ROPN1B|152015|rhophilin associated tail protein 1B##NM_001012337|ROPN1B|152015|rhophilin associated tail protein 1B##BC141849|ROPN1B|152015|rhophilin associated tail protein 1B##AK093380|SLC41A3|54946|solute carrier family 41, member 3##NM_001008487|SLC41A3|54946|solute carrier family 41, member 3	0.809313	CTCF.p2:7:0.809
chr12	71809545	71809682	reg1008679.p1	11.755	+	BC005246 NM_004616	-257835	-	AK223022 TSC_hg19_v1_chr12_-_71551590 AK313112	-258022	-	TSC_hg19_v1_chr12_-_71314519 D64053 NM_002849	-495065	-	TSC_hg19_v1_chr12_+_71833577 AK294985 AK315133	23937	+	TSC_hg19_v1_chr12_+_71833761 AK075399 AF062006 FN820440 NM_003667 BC096324 BC096325 BC096326 BC099650 AF061444	24197	+	AB385347 CU677389 TSC_hg19_v1_chr12_-_72057432	247797	-	BC005246|TSPAN8|7103|tetraspanin 8##NM_004616|TSPAN8|7103|tetraspanin 8##AK223022|TSPAN8|7103|tetraspanin 8##AK313112|TSPAN8|7103|tetraspanin 8##D64053|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##NM_002849|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##AK294985|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AK315133|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AK075399|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AF062006|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##FN820440|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##NM_003667|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096324|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096325|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096326|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC099650|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AF061444|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5	0.994877	CTCF.p2:-6:0.995
chr20	20218143	20218260	reg1008515.p1	11.755	+	NM_001167816 AL117439	-180881	+	BC144222 AF255443 AF318303 AF318304 AF318305 NM_016652	-181514	-	AK307817 NM_015585 AK304174 BC028708	-185025	+	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	130553	+	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	475027	-	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	888463	+	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AK307817|C20orf26|26074|chromosome 20 open reading frame 26##NM_015585|C20orf26|26074|chromosome 20 open reading frame 26##AK304174|C20orf26|26074|chromosome 20 open reading frame 26##BC028708|C20orf26|26074|chromosome 20 open reading frame 26##M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1	0.811149	CTCF.p2:2:0.811
chr6	107639481	107639603	reg1006886.p2	11.755	+	BC131628 NM_001080450	-203907	-	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	-290070	+	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	-562045	+	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	141188	-	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	171886	+	AK303562 AK074125 TSC_hg19_v1_chr6_-_108145518 AK093571 AX748208 NM_198081	505974	-	BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203##NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)##AK303562|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK074125|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK093571|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_198081|SCML4|256380|sex comb on midleg-like 4 (Drosophila)	0.803364	CTCF.p2:-15:0.803
chr22	21474241	21474393	reg1007372.p1	11.754	+	BC062565 AJ000730 BC008814 NM_004173 TSC_hg19_v1_chr22_-_21386851	-87466	-	BC064805 NM_001159554 AB002058 CR456535 BC109209 AB528202 CU013135 CU013423 AK309079 NM_005446 BC047287 BC063553 BC033488	-104857	+	TSC_hg19_v1_chr22_+_21356508 AK096901 BC065749	-117836	+	NM_001128633	263345	+	NM_001128635	263722	+	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	297359	+	BC062565|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AJ000730|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC008814|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_004173|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC064805|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_001159554|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AB002058|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CR456535|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC109209|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013135|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013423|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK309079|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_005446|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC047287|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC063553|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC033488|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK096901|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##BC065749|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2	0.92641	CTCF.p2:-32:0.926
chr2	74562108	74562218	reg1008583.p1	11.754	+	AF243499 AF293338 NM_021196	-20013	-	NM_006636 TSC_hg19_v1_chr2_+_74425741 AK300035 AK130664 AK222826 AK223041 AK302245 AK313138 BC015062 BC001548 BC017054 AB529041 X16396 DQ894679	-136426	+	AK057260 TSC_hg19_v1_chr2_-_74425749	-136448	-	NM_133478	8370	-	AK315014 BC071583 TSC_hg19_v1_chr2_-_74601817 NM_001135041 NM_023019	39594	-	AK314352 TSC_hg19_v1_chr2_-_74607441 NM_001135040 NM_001190837 NM_004082	45290	-	AF243499|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##AF293338|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##NM_021196|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##NM_006636|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK300035|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK130664|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK222826|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK223041|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK302245|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK313138|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC015062|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC001548|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC017054|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##X16396|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##DQ894679|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##NM_133478|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##AK315014|DCTN1|1639|dynactin 1##BC071583|DCTN1|1639|dynactin 1##NM_001135041|DCTN1|1639|dynactin 1##NM_023019|DCTN1|1639|dynactin 1##AK314352|DCTN1|1639|dynactin 1##NM_001135040|DCTN1|1639|dynactin 1##NM_001190837|DCTN1|1639|dynactin 1##NM_004082|DCTN1|1639|dynactin 1	0.995385	CTCF.p2:2:0.995
chr13	107272420	107272540	reg1007175.p2	11.753	+	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	-51995	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	-85131	-	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-1153889	+	NM_001080396	1246979	-	NM_002312 X83441	1594649	-	AK292419 AK314844 BC037491 NM_206937	1595395	-	BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A##NM_002312|LIG4|3981|ligase IV, DNA, ATP-dependent##X83441|LIG4|3981|ligase IV, DNA, ATP-dependent##AK292419|LIG4|3981|ligase IV, DNA, ATP-dependent##AK314844|LIG4|3981|ligase IV, DNA, ATP-dependent##BC037491|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_206937|LIG4|3981|ligase IV, DNA, ATP-dependent	0.142086	
chr20	49988964	49989081	reg1007411.p1	11.753	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	-349365	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-413654	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-413959	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	170117	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	170253	-	EU887574 EU887577 NM_001136021	190145	-	BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.975622	CTCF.p2:-21:0.976
chr22	30658972	30659093	reg1007821.p1	11.753	+	AB527710 X13967 BC093733 BC093735 BC143305 BC069540 TSC_hg19_v1_chr22_-_30642749 AK315310 NM_002309	-16293	-	BC030013 NM_152510	-182580	+	BC142713 TSC_hg19_v1_chr22_+_30279201 AB002369 BC152455	-379771	+	CR541703 AB463155 CU013134 CU013422 DQ892537 DQ895748 CR456534 BC011589 NM_020530 TSC_hg19_v1_chr22_-_30662841	3783	-	CU013000 CU013288 CU692418 AB528172 BC021927 AK309436 AK055587 TSC_hg19_v1_chr22_-_30685566 CR456449 AK310246 NM_001037666	26518	-	TSC_hg19_v1_chr22_-_30722928 AB449894 AB590468 BC143051 BC143052 BC150187 CT841514 BC150214 AK127939 AF331038 BC022201 BC136815 BC171775 AK074656 BC142940 NM_001204240 NM_031937	63895	-	X13967|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093733|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093735|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC143305|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC069540|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AK315310|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##NM_002309|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC030013|HORMAD2|150280|HORMA domain containing 2##NM_152510|HORMAD2|150280|HORMA domain containing 2##BC142713|MTMR3|8897|myotubularin related protein 3##AB002369|MTMR3|8897|myotubularin related protein 3##BC152455|MTMR3|8897|myotubularin related protein 3##CR541703|OSM|5008|oncostatin M##CU013134|OSM|5008|oncostatin M##CU013422|OSM|5008|oncostatin M##DQ892537|OSM|5008|oncostatin M##DQ895748|OSM|5008|oncostatin M##CR456534|OSM|5008|oncostatin M##BC011589|OSM|5008|oncostatin M##NM_020530|OSM|5008|oncostatin M##CU013000|GATSL3|652968|GATS protein-like 3##CU013288|GATSL3|652968|GATS protein-like 3##BC021927|GATSL3|652968|GATS protein-like 3##AK309436|GATSL3|652968|GATS protein-like 3##AK055587|GATSL3|652968|GATS protein-like 3##CR456449|GATSL3|652968|GATS protein-like 3##AK310246|GATSL3|652968|GATS protein-like 3##NM_001037666|GATSL3|652968|GATS protein-like 3##AB449894|TBC1D10A|83874|TBC1 domain family, member 10A##BC143051|TBC1D10A|83874|TBC1 domain family, member 10A##BC143052|TBC1D10A|83874|TBC1 domain family, member 10A##BC150187|TBC1D10A|83874|TBC1 domain family, member 10A##CT841514|TBC1D10A|83874|TBC1 domain family, member 10A##BC150214|TBC1D10A|83874|TBC1 domain family, member 10A##AK127939|TBC1D10A|83874|TBC1 domain family, member 10A##AF331038|TBC1D10A|83874|TBC1 domain family, member 10A##BC022201|TBC1D10A|83874|TBC1 domain family, member 10A##BC136815|TBC1D10A|83874|TBC1 domain family, member 10A##BC171775|TBC1D10A|83874|TBC1 domain family, member 10A##AK074656|TBC1D10A|83874|TBC1 domain family, member 10A##BC142940|TBC1D10A|83874|TBC1 domain family, member 10A##NM_001204240|TBC1D10A|83874|TBC1 domain family, member 10A##NM_031937|TBC1D10A|83874|TBC1 domain family, member 10A	0.9715	CTCF.p2:-3:0.972
chrX	65206212	65206348	reg1006075.p2	11.753	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	-318632	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	-318733	+	NM_002444 TSC_hg19_v1_chrX_+_64887520	-318763	+	TSC_hg19_v1_chrX_+_65235302 DQ680071 DQ680072	29011	+	DQ891770 DQ894953 BC010525 AJ132502 AK293215 AK298389 AK075153 AK297050 AK301417 AK075171 NM_001100431 NM_001184830 NM_001184831 NM_007268	53622	-	NM_138737 TSC_hg19_v1_chrX_+_65382512	176195	+	AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##NM_002444|MSN|4478|moesin##DQ891770|VSIG4|11326|V-set and immunoglobulin domain containing 4##DQ894953|VSIG4|11326|V-set and immunoglobulin domain containing 4##BC010525|VSIG4|11326|V-set and immunoglobulin domain containing 4##AJ132502|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK293215|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK298389|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075153|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK297050|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK301417|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075171|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001100431|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184830|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184831|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_007268|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_138737|HEPH|9843|hephaestin	0.978806	CTCF.p2:3:0.979
chr7	144733851	144733988	reg1010378.p1	11.752	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-200783	-	TSC_hg19_v1_chr7_-_144533086 AK091736	-200830	-	NM_001080413 AB528776	-626600	-	NM_014141	1079533	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	1079965	+	TSC_hg19_v1_chr7_+_148036552 CR933671	3302646	+	AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##AK091736|TPK1|27010|thiamin pyrophosphokinase 1##NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##CR933671|CNTNAP2|26047|contactin associated protein-like 2	0.99116	CTCF.p2:-21:0.919
chr9	133741890	133742040	reg1008435.p1	11.752	+	TSC_hg19_v1_chr9_+_133710748 M14754 NM_005157	-31177	+	TSC_hg19_v1_chr9_+_133710665 M30833 X16416	-31298	+	NM_007313 AB209642 M14753	-152646	+	AB109625 BC101127 BC101128 EU832764 GQ129307 NM_198180	27259	-	BC112892 AY358311 AK292489 TSC_hg19_v1_chr9_-_133814106	72086	-	BC032953 NM_032843 TSC_hg19_v1_chr9_-_133814253	72279	-	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##NM_007313|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AB209642|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M14753|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AB109625|QRFP|347148|pyroglutamylated RFamide peptide##BC101127|QRFP|347148|pyroglutamylated RFamide peptide##BC101128|QRFP|347148|pyroglutamylated RFamide peptide##EU832764|QRFP|347148|pyroglutamylated RFamide peptide##GQ129307|QRFP|347148|pyroglutamylated RFamide peptide##NM_198180|QRFP|347148|pyroglutamylated RFamide peptide##BC112892|FIBCD1|84929|fibrinogen C domain containing 1##AY358311|FIBCD1|84929|fibrinogen C domain containing 1##AK292489|FIBCD1|84929|fibrinogen C domain containing 1##BC032953|FIBCD1|84929|fibrinogen C domain containing 1##NM_032843|FIBCD1|84929|fibrinogen C domain containing 1	0.994686	CTCF.p2:-17:0.995
chr13	79552653	79552805	reg1007631.p2	11.751	+	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	-319436	-	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	-375006	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	-382447	+	BX648672 BC111697 BC111739 BC041655 NM_022118 TSC_hg19_v1_chr13_-_79979967 AK302871	427225	-	BC030806 TSC_hg19_v1_chr13_-_79980382	427654	-	TSC_hg19_v1_chr13_+_79980440 AK002196 BC034812	427722	+	AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##BX648672|RBM26|64062|RNA binding motif protein 26##BC111697|RBM26|64062|RNA binding motif protein 26##BC111739|RBM26|64062|RNA binding motif protein 26##BC041655|RBM26|64062|RNA binding motif protein 26##NM_022118|RBM26|64062|RNA binding motif protein 26##AK302871|RBM26|64062|RNA binding motif protein 26##BC030806|RBM26|64062|RNA binding motif protein 26##AK002196|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)##BC034812|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)	0.984097	CTCF.p2:-2:0.984
chr22	32840249	32840379	reg1009258.p1	11.751	+	TSC_hg19_v1_chr22_-_32808253 AK301945 NM_014306	-32056	-	AK297826 AK297908 BC016707 TSC_hg19_v1_chr22_-_32808235 AK312503 AF161466	-32078	-	CR457175 CU677691 CU678324 AB527121 CU013001 CU013289 DQ890931 DQ894092 CR456450 BC000151 BC002970 AL050255 TSC_hg19_v1_chr22_-_32808224 BC010308 AF155658	-32129	-	AF465766 BC131582 NM_174932	13058	-	TSC_hg19_v1_chr22_+_32870699 NM_012179 BC008361	30390	+	TSC_hg19_v1_chr22_+_32870797 AL050254 AK226087	30458	+	AK301945|C22orf28|51493|chromosome 22 open reading frame 28##NM_014306|C22orf28|51493|chromosome 22 open reading frame 28##AK297826|C22orf28|51493|chromosome 22 open reading frame 28##AK297908|C22orf28|51493|chromosome 22 open reading frame 28##BC016707|C22orf28|51493|chromosome 22 open reading frame 28##AK312503|C22orf28|51493|chromosome 22 open reading frame 28##AF161466|C22orf28|51493|chromosome 22 open reading frame 28##CR457175|C22orf28|51493|chromosome 22 open reading frame 28##DQ890931|C22orf28|51493|chromosome 22 open reading frame 28##DQ894092|C22orf28|51493|chromosome 22 open reading frame 28##CR456450|C22orf28|51493|chromosome 22 open reading frame 28##BC000151|C22orf28|51493|chromosome 22 open reading frame 28##BC002970|C22orf28|51493|chromosome 22 open reading frame 28##AL050255|C22orf28|51493|chromosome 22 open reading frame 28##BC010308|C22orf28|51493|chromosome 22 open reading frame 28##AF155658|C22orf28|51493|chromosome 22 open reading frame 28##AF465766|BPIFC|254240|BPI fold containing family C##BC131582|BPIFC|254240|BPI fold containing family C##NM_174932|BPIFC|254240|BPI fold containing family C##NM_012179|FBXO7|25793|F-box protein 7##BC008361|FBXO7|25793|F-box protein 7##AL050254|FBXO7|25793|F-box protein 7##AK226087|FBXO7|25793|F-box protein 7	0.458533	CTCF.p2:12:0.459
chrX	57004705	57004846	reg1007951.p1	11.751	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-249084	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-414724	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-745865	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	17196	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	143153	-	BC071694 NM_019003	159282	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.618604	CTCF.p2:23:0.619
chrX	114981380	114981536	reg1006773.p1	11.749	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-153590	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-184416	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-185852	+	BC003645 TSC_hg19_v1_chrX_-_115085443	103981	-	AK313927 NM_000686 X87723 U16957	320537	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	586309	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:21:0.429
chr11	114609809	114609917	reg1007119.p1	11.748	+	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-60615	+	AK000134 AK225236 TSC_hg19_v1_chr11_-_114466485 NM_001077639 NM_017678	-143385	-	AY358805 TSC_hg19_v1_chr11_-_114466403	-143458	-	AY309502 TSC_hg19_v1_chr11_-_115088658	478785	-	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	765317	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	2033835	-	NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##AK000134|FAM55D|54827|family with sequence similarity 55, member D##AK225236|FAM55D|54827|family with sequence similarity 55, member D##NM_001077639|FAM55D|54827|family with sequence similarity 55, member D##NM_017678|FAM55D|54827|family with sequence similarity 55, member D##AY358805|FAM55D|54827|family with sequence similarity 55, member D##AY309502|CADM1|23705|cell adhesion molecule 1##AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)	0.996446	CTCF.p2:6:0.996
chr1	93426025	93426140	reg1006665.p1	11.748	+	TSC_hg19_v1_chr1_-_93399531 BX648424	-26490	-	NM_001252271	-83376	-	TSC_hg19_v1_chr1_+_93300359 BC012937	-125682	+	TSC_hg19_v1_chr1_-_93427020 BC070342 NM_001006605 NM_001252269 NM_001252270 NM_001252273	956	-	TSC_hg19_v1_chr1_+_93544836 NM_001164391 NM_001164392 NM_001164393 NM_007358 AK290318 AK302900 AJ010014 AK302776 AF086908 BC010013 BC001897	118751	+	AY359039 BC016556 AF151858 TSC_hg19_v1_chr1_-_93645971 AK293308 BC016365 AK312787 CR936808 AK125882	219905	-	NM_001252271|FAM69A|388650|family with sequence similarity 69, member A##BC012937|RPL5|6125|ribosomal protein L5##BC070342|FAM69A|388650|family with sequence similarity 69, member A##NM_001006605|FAM69A|388650|family with sequence similarity 69, member A##NM_001252269|FAM69A|388650|family with sequence similarity 69, member A##NM_001252270|FAM69A|388650|family with sequence similarity 69, member A##NM_001252273|FAM69A|388650|family with sequence similarity 69, member A##NM_001164391|MTF2|22823|metal response element binding transcription factor 2##NM_001164392|MTF2|22823|metal response element binding transcription factor 2##NM_001164393|MTF2|22823|metal response element binding transcription factor 2##NM_007358|MTF2|22823|metal response element binding transcription factor 2##AK290318|MTF2|22823|metal response element binding transcription factor 2##AK302900|MTF2|22823|metal response element binding transcription factor 2##AJ010014|MTF2|22823|metal response element binding transcription factor 2##AK302776|MTF2|22823|metal response element binding transcription factor 2##AF086908|MTF2|22823|metal response element binding transcription factor 2##BC010013|MTF2|22823|metal response element binding transcription factor 2##BC001897|MTF2|22823|metal response element binding transcription factor 2##AY359039|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016556|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AF151858|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK293308|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016365|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK312787|TMED5|50999|transmembrane emp24 protein transport domain containing 5##CR936808|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK125882|TMED5|50999|transmembrane emp24 protein transport domain containing 5	0.326196	CTCF.p2:10:0.326
chr2	75855143	75855259	reg1006973.p1	11.748	+	AK023453 NM_032181	-58354	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	-67111	-	BC016157 TSC_hg19_v1_chr2_-_75788066	-67154	-	TSC_hg19_v1_chr2_+_75873908 NM_014763 AK295578 AK291250 BC030144 CU688824 AB463123 BC021051 D14660 DQ892303 DQ895502	18737	+	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	82518	-	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	82850	-	AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_014763|MRPL19|9801|mitochondrial ribosomal protein L19##AK295578|MRPL19|9801|mitochondrial ribosomal protein L19##AK291250|MRPL19|9801|mitochondrial ribosomal protein L19##BC030144|MRPL19|9801|mitochondrial ribosomal protein L19##BC021051|MRPL19|9801|mitochondrial ribosomal protein L19##D14660|MRPL19|9801|mitochondrial ribosomal protein L19##DQ892303|MRPL19|9801|mitochondrial ribosomal protein L19##DQ895502|MRPL19|9801|mitochondrial ribosomal protein L19##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2	0.999457	CTCF.p2:9:0.999
chr1	149934125	149934269	reg1004670.p1	11.747	+	AK298775 AK304820 TSC_hg19_v1_chr1_-_149908763 BC094756 NM_001145862	-25423	-	AK304691 U78556 U78557 TSC_hg19_v1_chr1_-_149908741 BC064372	-25463	-	BC100818 BC100819 BC100820 BC100821 CU687866 TSC_hg19_v1_chr1_-_149908229 AK097000 NM_181873 AK296094	-26010	-	AJ293573 BC072681 BC020622 TSC_hg19_v1_chr1_-_149982676 AK299790 NM_020205	48425	-	NM_007259 BC028382 AK301994 AK298786	105192	+	TSC_hg19_v1_chr1_+_150039889 AK298835 AK023170 AK293555 BC012932 AF165513 AK295529 AJ133421 AK223214 AK307949 CU688480	105667	+	AK298775|MTMR11|10903|myotubularin related protein 11##AK304820|MTMR11|10903|myotubularin related protein 11##BC094756|MTMR11|10903|myotubularin related protein 11##NM_001145862|MTMR11|10903|myotubularin related protein 11##AK304691|MTMR11|10903|myotubularin related protein 11##U78556|MTMR11|10903|myotubularin related protein 11##U78557|MTMR11|10903|myotubularin related protein 11##BC064372|MTMR11|10903|myotubularin related protein 11##BC100818|MTMR11|10903|myotubularin related protein 11##BC100819|MTMR11|10903|myotubularin related protein 11##BC100820|MTMR11|10903|myotubularin related protein 11##BC100821|MTMR11|10903|myotubularin related protein 11##AK097000|MTMR11|10903|myotubularin related protein 11##NM_181873|MTMR11|10903|myotubularin related protein 11##AK296094|MTMR11|10903|myotubularin related protein 11##AJ293573|OTUD7B|56957|OTU domain containing 7B##BC072681|OTUD7B|56957|OTU domain containing 7B##BC020622|OTUD7B|56957|OTU domain containing 7B##AK299790|OTUD7B|56957|OTU domain containing 7B##NM_020205|OTUD7B|56957|OTU domain containing 7B##NM_007259|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##BC028382|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK301994|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK298786|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK298835|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK023170|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK293555|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##BC012932|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AF165513|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK295529|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AJ133421|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK223214|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK307949|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)	0.491855	CTCF.p2:-47:0.492
chr6	150392393	150392508	reg1007051.p1	11.747	+	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	-2237	-	BC131600 AB528849 AY039682 NM_130900	-45817	-	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	-107288	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	71791	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	297708	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	528570	+	AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L##AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1	0.99477	CTCF.p2:-8:0.995
chr2	88459541	88459662	reg1007315.p1	11.746	+	CR542090 AB527938 M10617 BC032801 M10050 TSC_hg19_v1_chr2_-_88427582 BC022287 NM_001443	-32009	-	BC126191 NM_198274 AK091724 AX747145 BC017915 BX647878 AL832035 AB527846 EU831908 EU832002 HQ258264 AY518933	-92252	+	BC107580 TSC_hg19_v1_chr2_-_88355283	-104315	-	NM_001244676 NM_001244678 AK289486 AK315831 BC064423	10263	+	NM_018271 BC050699 BC035315 AK001778	13155	+	NM_001135649	292451	-	CR542090|FABP1|2168|fatty acid binding protein 1, liver##M10617|FABP1|2168|fatty acid binding protein 1, liver##BC032801|FABP1|2168|fatty acid binding protein 1, liver##M10050|FABP1|2168|fatty acid binding protein 1, liver##BC022287|FABP1|2168|fatty acid binding protein 1, liver##NM_001443|FABP1|2168|fatty acid binding protein 1, liver##BC126191|SMYD1|150572|SET and MYND domain containing 1##NM_198274|SMYD1|150572|SET and MYND domain containing 1##AK091724|SMYD1|150572|SET and MYND domain containing 1##BC017915|SMYD1|150572|SET and MYND domain containing 1##BX647878|SMYD1|150572|SET and MYND domain containing 1##AL832035|SMYD1|150572|SET and MYND domain containing 1##EU831908|SMYD1|150572|SET and MYND domain containing 1##EU832002|SMYD1|150572|SET and MYND domain containing 1##HQ258264|SMYD1|150572|SET and MYND domain containing 1##AY518933|SMYD1|150572|SET and MYND domain containing 1##BC107580|KRCC1|51315|lysine-rich coiled-coil 1##NM_001244676|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001244678|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK289486|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK315831|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC064423|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_018271|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC050699|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC035315|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK001778|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001135649|FOXI3|344167|forkhead box I3	0.999756	CTCF.p2:3:1.000
chr5	126900005	126900156	reg1007329.p2	11.746	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	-40886	+	NM_130809 TSC_hg19_v1_chr5_+_126853331 AL831963 AL832056 AL832600 AJ427339 AJ441110 AJ496322 AJ515158 AJ515428 AJ515429 AK057437 BC017066	-46729	+	NM_032446 CR749437 AK307919 BC020198 AB058676 BC152478	-273546	+	NM_001048252 AB219764	84643	+	NM_001127385 AB219832 BC071790	88645	+	TSC_hg19_v1_chr5_-_127418765 AF088062 BX648677 BC036629	518683	-	AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1##NM_130809|PRRC1|133619|proline-rich coiled-coil 1##AL831963|PRRC1|133619|proline-rich coiled-coil 1##AL832056|PRRC1|133619|proline-rich coiled-coil 1##AL832600|PRRC1|133619|proline-rich coiled-coil 1##AJ427339|PRRC1|133619|proline-rich coiled-coil 1##AJ441110|PRRC1|133619|proline-rich coiled-coil 1##AJ496322|PRRC1|133619|proline-rich coiled-coil 1##AJ515158|PRRC1|133619|proline-rich coiled-coil 1##AJ515428|PRRC1|133619|proline-rich coiled-coil 1##AJ515429|PRRC1|133619|proline-rich coiled-coil 1##AK057437|PRRC1|133619|proline-rich coiled-coil 1##BC017066|PRRC1|133619|proline-rich coiled-coil 1##NM_032446|MEGF10|84466|multiple EGF-like-domains 10##CR749437|MEGF10|84466|multiple EGF-like-domains 10##AK307919|MEGF10|84466|multiple EGF-like-domains 10##BC020198|MEGF10|84466|multiple EGF-like-domains 10##AB058676|MEGF10|84466|multiple EGF-like-domains 10##BC152478|MEGF10|84466|multiple EGF-like-domains 10##NM_001048252|CTXN3|613212|cortexin 3##AB219764|CTXN3|613212|cortexin 3##NM_001127385|CTXN3|613212|cortexin 3##AB219832|CTXN3|613212|cortexin 3##BC071790|CTXN3|613212|cortexin 3##AF088062|FLJ33630|644873|uncharacterized LOC644873##BX648677|FLJ33630|644873|uncharacterized LOC644873##BC036629|FLJ33630|644873|uncharacterized LOC644873	0.993244	CTCF.p2:-22:0.993
chr12	112383183	112383289	reg1007409.p1	11.745	+	NM_003668 NM_139078 BC047284	-102916	+	BC041049 TSC_hg19_v1_chr12_+_112280044	-103163	+	AK122767 TSC_hg19_v1_chr12_+_112280039	-103324	+	BC048796 BC070135 AK074648 TSC_hg19_v1_chr12_-_112450970 AL833501 BC000282 AK092832 AX747754 NM_001193453 NM_001193531 NM_138341	67732	-	NM_001034025 NM_006817 TSC_hg19_v1_chr12_+_112451212 BC101493 BC101495	67950	+	TSC_hg19_v1_chr12_+_112451229 AK309426	67994	+	NM_003668|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##NM_139078|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##BC047284|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##BC041049|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##AK122767|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##BC048796|TMEM116|89894|transmembrane protein 116##BC070135|TMEM116|89894|transmembrane protein 116##AK074648|TMEM116|89894|transmembrane protein 116##AL833501|TMEM116|89894|transmembrane protein 116##BC000282|TMEM116|89894|transmembrane protein 116##AK092832|LOC728543|728543|uncharacterized LOC728543##NM_001193453|TMEM116|89894|transmembrane protein 116##NM_001193531|TMEM116|89894|transmembrane protein 116##NM_138341|TMEM116|89894|transmembrane protein 116##NM_001034025|ERP29|10961|endoplasmic reticulum protein 29##NM_006817|ERP29|10961|endoplasmic reticulum protein 29##BC101493|ERP29|10961|endoplasmic reticulum protein 29##BC101495|ERP29|10961|endoplasmic reticulum protein 29	0.981128	CTCF.p2:-27:0.981
chr16	89400173	89400316	reg1009533.p1	11.744	+	AK293862 NM_001242885	-12704	+	BC041585 TSC_hg19_v1_chr16_-_89351073	-49288	-	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	-50170	-	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	156687	-	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	174570	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	226821	+	AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC041585|ANKRD11|29123|ankyrin repeat domain 11##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13	0.149679	
chr8	12282539	12282669	reg1008025.p1	11.744	+	DQ012022 NM_001037804 NM_001195257	-106780	-	AK309984 BC062615 BC072459 BC098427 BC048297 AK098138 AK308513 AK297741 AK308439 BC085016 NM_001083537 AK291001 AK298940	-231017	-	AY509884 NM_201402	-286336	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	11239	-	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	11300	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	330400	-	DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##BC062615|FAM86B1|85002|family with sequence similarity 86, member B1##BC098427|FAM86B1|85002|family with sequence similarity 86, member B1##BC048297|FAM86B1|85002|family with sequence similarity 86, member B1##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##NM_001083537|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##NM_201402|USP17L2|377630|ubiquitin specific peptidase 17-like 2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1	0.722243	CTCF.p2:0:0.581
chr8	81947152	81947293	reg1008756.p1	11.744	+	AK131274 NM_001033723	-160207	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-548738	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-863452	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	77092	-	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	245551	+	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	412447	-	AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2	0.0	
chr17_ctg5_hap1	575726	575864	reg1009261.p1	11.743	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.910217	CTCF.p2:0:0.892
chr2	159757931	159758045	reg1007469.p2	11.743	+	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	-106153	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-444405	+	TSC_hg19_v1_chr2_+_159313419 BC034473	-444553	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	67159	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	385160	-	AK127551 BC107570 TSC_hg19_v1_chr2_-_160472070	714026	-	AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##BC034473|PKP4|8502|plakophilin 4##BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	1.03866	CTCF.p2:-20:0.994
chr2	7343222	7343334	reg1008841.p1	11.743	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-285691	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-325415	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-336575	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1478925	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1634441	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1800543	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.771676	CTCF.p2:-3:0.772
chr3	187459932	187460058	reg1009187.p1	11.743	+	S67779 NM_001130845	-5730	-	EU139066 NM_001134738	-7314	-	BC068081 NM_001004312	-39651	-	BC142705 BC150184 Z21943 AK304325 AK308162 TSC_hg19_v1_chr3_-_187463257 BC146796	3249	-	U00115 NM_001706	3498	-	AL833171 TSC_hg19_v1_chr3_+_187870843	410832	+	S67779|BCL6|604|B-cell CLL/lymphoma 6##NM_001130845|BCL6|604|B-cell CLL/lymphoma 6##EU139066|BCL6|604|B-cell CLL/lymphoma 6##NM_001134738|BCL6|604|B-cell CLL/lymphoma 6##BC068081|RTP2|344892|receptor (chemosensory) transporter protein 2##NM_001004312|RTP2|344892|receptor (chemosensory) transporter protein 2##BC142705|BCL6|604|B-cell CLL/lymphoma 6##BC150184|BCL6|604|B-cell CLL/lymphoma 6##Z21943|BCL6|604|B-cell CLL/lymphoma 6##AK304325|BCL6|604|B-cell CLL/lymphoma 6##AK308162|BCL6|604|B-cell CLL/lymphoma 6##BC146796|BCL6|604|B-cell CLL/lymphoma 6##U00115|BCL6|604|B-cell CLL/lymphoma 6##NM_001706|BCL6|604|B-cell CLL/lymphoma 6##AL833171|LPP|4026|LIM domain containing preferred translocation partner in lipoma	0.0	
chr10	44806586	44806727	reg1005962.p1	11.742	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-662350	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-662451	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-704759	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	73843	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	600062	+	AK056518 TSC_hg19_v1_chr10_-_45455156	648491	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.98315	CTCF.p2:-21:0.983
chr11	120170799	120170916	reg1008372.p1	11.742	+	AK291993 NM_014352 AF162278 BC101649 BC143593 BC143594 BC143595 AF133895 AJ012214 EU446698	-59880	+	AK302212 NM_001244682	-63509	+	TSC_hg19_v1_chr11_+_120081739 BC047726 NM_178507 BC008339	-89144	+	AK128040 NM_001198670 NM_001198671 NM_001198672 NM_001198673 NM_001198674 NM_001198675 NM_174926	24980	+	AK096207 AK304086 TSC_hg19_v1_chr11_+_120196007 AK289680 AK294713 BC015232	25161	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	36247	+	AK291993|POU2F3|25833|POU class 2 homeobox 3##NM_014352|POU2F3|25833|POU class 2 homeobox 3##AF162278|POU2F3|25833|POU class 2 homeobox 3##BC101649|POU2F3|25833|POU class 2 homeobox 3##BC143593|POU2F3|25833|POU class 2 homeobox 3##BC143594|POU2F3|25833|POU class 2 homeobox 3##BC143595|POU2F3|25833|POU class 2 homeobox 3##AF133895|POU2F3|25833|POU class 2 homeobox 3##AJ012214|POU2F3|25833|POU class 2 homeobox 3##EU446698|POU2F3|25833|POU class 2 homeobox 3##AK302212|POU2F3|25833|POU class 2 homeobox 3##NM_001244682|POU2F3|25833|POU class 2 homeobox 3##BC047726|OAF|220323|OAF homolog (Drosophila)##NM_178507|OAF|220323|OAF homolog (Drosophila)##BC008339|OAF|220323|OAF homolog (Drosophila)##AK128040|TMEM136|219902|transmembrane protein 136##NM_001198670|TMEM136|219902|transmembrane protein 136##NM_001198671|TMEM136|219902|transmembrane protein 136##NM_001198672|TMEM136|219902|transmembrane protein 136##NM_001198673|TMEM136|219902|transmembrane protein 136##NM_001198674|TMEM136|219902|transmembrane protein 136##NM_001198675|TMEM136|219902|transmembrane protein 136##NM_174926|TMEM136|219902|transmembrane protein 136##AK096207|TMEM136|219902|transmembrane protein 136##AK304086|TMEM136|219902|transmembrane protein 136##AK289680|TMEM136|219902|transmembrane protein 136##AK294713|TMEM136|219902|transmembrane protein 136##BC015232|TMEM136|219902|transmembrane protein 136##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12	0.511354	CTCF.p2:12:0.511
chr1	60413112	60413223	reg1007263.p1	11.741	+	BC032594 TSC_hg19_v1_chr1_-_60392478	-20698	-	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	-20782	-	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	-132515	+	BC027878 AK124828 NM_152377	126266	-	AK092769 TSC_hg19_v1_chr1_+_61542908	1129689	+	TSC_hg19_v1_chr1_+_61542928 AK299289 NM_001145511	1129769	+	BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)##BC027878|C1orf87|127795|chromosome 1 open reading frame 87##AK124828|C1orf87|127795|chromosome 1 open reading frame 87##NM_152377|C1orf87|127795|chromosome 1 open reading frame 87##AK299289|NFIA|4774|nuclear factor I/A##NM_001145511|NFIA|4774|nuclear factor I/A	0.519778	CTCF.p2:20:0.520
chr3	119610925	119611066	reg1008192.p1	11.740	+	AY123976 TSC_hg19_v1_chr3_-_119582426	-28571	-	AF084644 NM_022002 AB528010 HQ692837 HQ709177	-109415	+	BC017304 TSC_hg19_v1_chr3_+_119500947	-110050	+	BC000251 AK290897 TSC_hg19_v1_chr3_-_119812684	201626	-	TSC_hg19_v1_chr3_-_119813270 BC012760 NM_001146156 NM_002093	202156	-	TSC_hg19_v1_chr3_+_119813618 BC035247	202675	+	AY123976|GSK3B|2932|glycogen synthase kinase 3 beta##AF084644|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##NM_022002|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##HQ692837|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##HQ709177|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##BC017304|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##BC000251|GSK3B|2932|glycogen synthase kinase 3 beta##AK290897|GSK3B|2932|glycogen synthase kinase 3 beta##BC012760|GSK3B|2932|glycogen synthase kinase 3 beta##NM_001146156|GSK3B|2932|glycogen synthase kinase 3 beta##NM_002093|GSK3B|2932|glycogen synthase kinase 3 beta	0.861295	CTCF.p2:-22:0.861
chr7	66843312	66843426	reg1006454.p1	11.740	+	TSC_hg19_v1_chr7_+_66767656 BC026058	-75712	+	TSC_hg19_v1_chr7_+_66767642 AK307290	-75721	+	TSC_hg19_v1_chr7_+_66767639 AK023257 AK308931	-75761	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	2220467	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	2220960	+	TSC_hg19_v1_chr7_+_69064580 BC011643	2221219	+	BC026058|STAG3L4|64940|stromal antigen 3-like 4##AK307290|STAG3L4|64940|stromal antigen 3-like 4##AK023257|STAG3L4|64940|stromal antigen 3-like 4##AK308931|STAG3L4|64940|stromal antigen 3-like 4##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2	0.98719	CTCF.p2:-1:0.987
chr12	122249997	122250114	reg1006993.p1	11.739	+	TSC_hg19_v1_chr12_+_122242580 NM_015048 JF813787	-7444	+	TSC_hg19_v1_chr12_-_122240852 AK311480	-9198	-	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	-18481	-	CU692906 DQ892664 DQ896049 BC024287 BC014790 X72389 TSC_hg19_v1_chr12_-_122296766 AK290826 NM_002150	46638	-	AK057510 NM_001171993	76461	-	TSC_hg19_v1_chr12_+_122326731 AB003177 NM_002813 AK315389 BC002383 BC004184 BC004213 DQ893594 EU831432 EU831524 AB528684	76640	+	NM_015048|SETD1B|23067|SET domain containing 1B##JF813787|SETD1B|23067|SET domain containing 1B##AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)##DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##AK057510|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_001171993|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_002813|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK315389|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC002383|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004184|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004213|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##DQ893594|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831432|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831524|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	0.998513	CTCF.p2:2:0.999
chr14	56806946	56807065	reg1007144.p2	11.739	+	TSC_hg19_v1_chr14_+_56585163 AF302502	-221831	+	TSC_hg19_v1_chr14_+_56585131 BC009476 NM_021255 AK315727	-222011	+	L25616 TSC_hg19_v1_chr14_+_56078737 AB527439	-728256	+	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	239540	+	NM_172337 AB593056	465358	-	AK314271 BC032579 NM_021728 AB593058	470139	-	AF302502|PELI2|57161|pellino homolog 2 (Drosophila)##BC009476|PELI2|57161|pellino homolog 2 (Drosophila)##NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)##AK315727|PELI2|57161|pellino homolog 2 (Drosophila)##L25616|KTN1|3895|kinectin 1 (kinesin receptor)##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101##NM_172337|OTX2|5015|orthodenticle homeobox 2##AB593056|OTX2|5015|orthodenticle homeobox 2##AK314271|OTX2|5015|orthodenticle homeobox 2##BC032579|OTX2|5015|orthodenticle homeobox 2##NM_021728|OTX2|5015|orthodenticle homeobox 2##AB593058|OTX2|5015|orthodenticle homeobox 2	0.996683	CTCF.p2:-1:0.997
chrX	134618705	134618817	reg1006681.p1	11.739	+	BC030620 TSC_hg19_v1_chrX_+_134555878 BC051704	-62887	+	AY927530 NM_152695 TSC_hg19_v1_chrX_+_134478720 AK314344 AK074194 AL833407 AY280801 BC060768 BC065938 AL833109	-140037	+	TSC_hg19_v1_chrX_-_134478038 AL831984 BC029787	-140758	-	TSC_hg19_v1_chrX_+_134654584 BX648113 NM_182540 AK096544 AL833319	35808	+	TSC_hg19_v1_chrX_+_134654737 BC140715 AK308423	35970	+	AY743709 NM_001017417 BC140735 BC140926 BC144437 BC140913	228473	+	BC030620|LINC00086|399668|long intergenic non-protein coding RNA 86##BC051704|LINC00086|399668|long intergenic non-protein coding RNA 86##AY927530|ZNF449|203523|zinc finger protein 449##NM_152695|ZNF449|203523|zinc finger protein 449##AK314344|ZNF449|203523|zinc finger protein 449##AK074194|ZNF449|203523|zinc finger protein 449##AL833407|ZNF449|203523|zinc finger protein 449##AY280801|ZNF449|203523|zinc finger protein 449##BC060768|ZNF449|203523|zinc finger protein 449##BC065938|ZNF449|203523|zinc finger protein 449##AL833109|ZNF449|203523|zinc finger protein 449##AL831984|ZNF75D|7626|zinc finger protein 75D##BC029787|ZNF75D|7626|zinc finger protein 75D##BX648113|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##NM_182540|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK096544|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AL833319|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BC140715|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK308423|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AY743709|CT45A1|541466|cancer/testis antigen family 45, member A1##NM_001017417|CT45A1|541466|cancer/testis antigen family 45, member A1##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1	0.801292	CTCF.p2:-12:0.801
chr1	183654365	183654494	reg1008799.p1	11.738	+	BC021711 NM_203454 AK098557	-31981	-	NM_015149 AF186780 BX537416 AK316526 AK295179 AK295611 BC136591	-49087	+	TSC_hg19_v1_chr1_-_183604891 BC057237 NM_005717 BC071857	-49489	-	AK311716 TSC_hg19_v1_chr1_+_183774253 AF186779 AB023176 AK304293 BC039250 AK309237 AK311701	119862	+	AB385353 CU690156 AK293973 TSC_hg19_v1_chr1_-_184006634	352136	-	AB011156 AF288389 NM_015101 BC035672 AK095192 TSC_hg19_v1_chr1_-_184006893	352435	-	BC021711|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##NM_203454|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##AK098557|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC057237|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##NM_005717|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##BC071857|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK293973|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AB011156|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AF288389|GLT25D2|23127|glycosyltransferase 25 domain containing 2##NM_015101|GLT25D2|23127|glycosyltransferase 25 domain containing 2##BC035672|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AK095192|GLT25D2|23127|glycosyltransferase 25 domain containing 2	0.999118	CTCF.p2:6:0.999
chr4	146877575	146877724	reg1009366.p1	11.738	+	BC033879 TSC_hg19_v1_chr4_-_146859976	-17681	-	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	-17972	-	NM_001080531	-276294	+	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	219218	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	565347	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	682442	+	AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827##NM_001080531|C4orf51|646603|chromosome 4 open reading frame 51##NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2	0.986137	CTCF.p2:-11:0.986
chr5	137618981	137619094	reg1008581.p1	11.738	+	AF051767 DQ890850 DQ894004 BC037951 AY358997 AK314022 AK297693 NM_001496 AY359037 TSC_hg19_v1_chr5_-_137610343	-8809	-	AK304635 TSC_hg19_v1_chr5_-_137549034 NM_004661	-70006	-	AF191341 BT009810 AB590268 DQ891686 DQ894870 TSC_hg19_v1_chr5_-_137549013 BC017713 AF053977 BC005258 BC010944 AK291610 AB011472 AK223250	-70034	-	M34065 BC019089 TSC_hg19_v1_chr5_-_137667469 NM_001790 NM_022809	48456	-	NM_001135647 TSC_hg19_v1_chr5_+_137673265 BC052993	54217	+	TSC_hg19_v1_chr5_+_137673789 NM_016605	54721	+	AF051767|GFRA3|2676|GDNF family receptor alpha 3##DQ890850|GFRA3|2676|GDNF family receptor alpha 3##DQ894004|GFRA3|2676|GDNF family receptor alpha 3##BC037951|GFRA3|2676|GDNF family receptor alpha 3##AY358997|GFRA3|2676|GDNF family receptor alpha 3##AK314022|GFRA3|2676|GDNF family receptor alpha 3##AK297693|GFRA3|2676|GDNF family receptor alpha 3##NM_001496|GFRA3|2676|GDNF family receptor alpha 3##AY359037|GFRA3|2676|GDNF family receptor alpha 3##AK304635|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##NM_004661|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AF191341|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##BT009810|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##DQ891686|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##DQ894870|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##BC017713|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AF053977|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##BC005258|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##BC010944|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AK291610|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AB011472|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AK223250|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##M34065|CDC25C|995|cell division cycle 25 homolog C (S. pombe)##BC019089|CDC25C|995|cell division cycle 25 homolog C (S. pombe)##NM_001790|CDC25C|995|cell division cycle 25 homolog C (S. pombe)##NM_022809|CDC25C|995|cell division cycle 25 homolog C (S. pombe)##NM_001135647|FAM53C|51307|family with sequence similarity 53, member C##BC052993|FAM53C|51307|family with sequence similarity 53, member C##NM_016605|FAM53C|51307|family with sequence similarity 53, member C	0.976585	CTCF.p2:-2:0.977
chr11	120673071	120673193	reg1008727.p1	11.737	+	AB384776 NM_014619 S67803	-142105	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-290667	+	BC063117 NM_001198665 NM_015313	-465515	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	221678	+	NM_005422	300242	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	490273	+	NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.0	
chr8	39891642	39891782	reg1007830.p2	11.737	+	AK128691 NM_194294	-99239	+	NM_002164 AK313259 BC027882 X17668 AY221100 CU693308 JF772862	-120328	+	X99374 CU687896 CU689996 DQ891615 DQ894807 AJ133005 U52370 BC034957 BC064547 AK301734 U38805 NM_001464	-195972	-	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	119306	+	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	863625	-	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	1275318	-	AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1##AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1##X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1##AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1##JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1##X99374|ADAM2|2515|ADAM metallopeptidase domain 2##DQ891615|ADAM2|2515|ADAM metallopeptidase domain 2##DQ894807|ADAM2|2515|ADAM metallopeptidase domain 2##AJ133005|ADAM2|2515|ADAM metallopeptidase domain 2##U52370|ADAM2|2515|ADAM metallopeptidase domain 2##BC034957|ADAM2|2515|ADAM metallopeptidase domain 2##BC064547|ADAM2|2515|ADAM metallopeptidase domain 2##AK301734|ADAM2|2515|ADAM metallopeptidase domain 2##U38805|ADAM2|2515|ADAM metallopeptidase domain 2##NM_001464|ADAM2|2515|ADAM metallopeptidase domain 2##BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1	0.977466	CTCF.p2:-20:0.977
chr11	18137182	18137308	reg1008007.p1	11.736	+	TSC_hg19_v1_chr11_-_18127617 AB489136 BC012010 AK123457 NM_138421	-9625	-	AY196345 BC106739 BC106740 X52836 AB590778 NM_004179	-74926	-	BC065375 AK292286 TSC_hg19_v1_chr11_-_18034745	-102529	-	BC067292 NM_054031	5256	+	BC095509 NM_054032	57138	+	BC007026 AK312182 M81349 TSC_hg19_v1_chr11_-_18258350	121099	-	AB489136|SAAL1|113174|serum amyloid A-like 1##BC012010|SAAL1|113174|serum amyloid A-like 1##AK123457|SAAL1|113174|serum amyloid A-like 1##NM_138421|SAAL1|113174|serum amyloid A-like 1##AY196345|TPH1|7166|tryptophan hydroxylase 1##BC106739|TPH1|7166|tryptophan hydroxylase 1##BC106740|TPH1|7166|tryptophan hydroxylase 1##X52836|TPH1|7166|tryptophan hydroxylase 1##NM_004179|TPH1|7166|tryptophan hydroxylase 1##BC065375|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AK292286|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC067292|MRGPRX3|117195|MAS-related GPR, member X3##NM_054031|MRGPRX3|117195|MAS-related GPR, member X3##BC095509|MRGPRX4|117196|MAS-related GPR, member X4##NM_054032|MRGPRX4|117196|MAS-related GPR, member X4##BC007026|SAA4|6291|serum amyloid A4, constitutive##AK312182|SAA4|6291|serum amyloid A4, constitutive##M81349|SAA4|6291|serum amyloid A4, constitutive	0.999415	CTCF.p2:-13:0.999
chr17	19266284	19266420	reg1007312.p2	11.736	+	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	-383	-	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	-125644	+	BC157869 NM_001129778	-235571	+	TSC_hg19_v1_chr17_+_19281077 NM_139032 NM_139033 BC007404 BC007992 U29725 AK295376	14838	+	AK309320 NM_001243475	15142	-	TSC_hg19_v1_chr17_+_19281800 NM_002749 NM_139034 U29726 BC030134 AB209611 BC009963 U25278	15471	+	BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##NM_139032|MAPK7|5598|mitogen-activated protein kinase 7##NM_139033|MAPK7|5598|mitogen-activated protein kinase 7##BC007404|MAPK7|5598|mitogen-activated protein kinase 7##BC007992|MAPK7|5598|mitogen-activated protein kinase 7##U29725|MAPK7|5598|mitogen-activated protein kinase 7##AK295376|MAPK7|5598|mitogen-activated protein kinase 7##AK309320|B9D1|27077|B9 protein domain 1##NM_001243475|B9D1|27077|B9 protein domain 1##NM_002749|MAPK7|5598|mitogen-activated protein kinase 7##NM_139034|MAPK7|5598|mitogen-activated protein kinase 7##U29726|MAPK7|5598|mitogen-activated protein kinase 7##BC030134|MAPK7|5598|mitogen-activated protein kinase 7##AB209611|MAPK7|5598|mitogen-activated protein kinase 7##BC009963|MAPK7|5598|mitogen-activated protein kinase 7##U25278|MAPK7|5598|mitogen-activated protein kinase 7	0.959845	CTCF.p2:-10:0.960
chr18	56751514	56751664	reg1009900.p1	11.736	+	TSC_hg19_v1_chr18_+_56531281 BC036366	-220240	+	TSC_hg19_v1_chr18_+_56530714 AB046849	-220734	+	NM_018181 AF295077 BC130618 BC130620	-221470	+	TSC_hg19_v1_chr18_+_56807119 AK314107 AF212233 AK311213 NM_033280 AK295346 AK307127 BC009703 CU679449	55558	+	TSC_hg19_v1_chr18_+_56887389 AK307264 BC004488 NM_001012512 NM_001012513 NM_002091 K02054 DQ893451 DQ896223 AB528662 AB102889 BT006803	135854	+	BC051901 AF115392 NM_013435 AB593018	189065	-	BC036366|ZNF532|55205|zinc finger protein 532##AB046849|ZNF532|55205|zinc finger protein 532##NM_018181|ZNF532|55205|zinc finger protein 532##AF295077|ZNF532|55205|zinc finger protein 532##BC130618|ZNF532|55205|zinc finger protein 532##BC130620|ZNF532|55205|zinc finger protein 532##AK314107|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AF212233|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##NM_033280|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK295346|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307127|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##BC009703|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307264|GRP|2922|gastrin-releasing peptide##BC004488|GRP|2922|gastrin-releasing peptide##NM_001012512|GRP|2922|gastrin-releasing peptide##NM_001012513|GRP|2922|gastrin-releasing peptide##NM_002091|GRP|2922|gastrin-releasing peptide##K02054|GRP|2922|gastrin-releasing peptide##DQ893451|GRP|2922|gastrin-releasing peptide##DQ896223|GRP|2922|gastrin-releasing peptide##AB102889|GRP|2922|gastrin-releasing peptide##BT006803|GRP|2922|gastrin-releasing peptide##BC051901|RAX|30062|retina and anterior neural fold homeobox##AF115392|RAX|30062|retina and anterior neural fold homeobox##NM_013435|RAX|30062|retina and anterior neural fold homeobox##AB593018|RAX|30062|retina and anterior neural fold homeobox	0.998538	CTCF.p2:5:0.999
chr8	130694406	130694514	reg1005959.p2	11.736	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1887677	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1945970	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1946135	+	AB042405 NM_031415	104673	-	BC003599 TSC_hg19_v1_chr8_-_130951934	257455	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	257546	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.689914	CTCF.p2:-1:0.690
chr12	6097874	6097978	reg1006667.p2	11.735	+	AJ272204 NM_020373	-42529	-	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	-43452	-	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	-494588	+	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	135833	-	TSC_hg19_v1_chr12_+_6309565 NM_001769 AK315219 AK308700 AK296332 AK309527 AY966455 X60111 AK296894 AK298431 BC011988 M38690 AY423720 DQ891314 DQ894498 AB590218 CU680148 L34068	211644	+	AK001527 NM_018173 BC104751 BC105961 BC109095	321707	+	AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor##NM_001769|CD9|928|CD9 molecule##AK315219|CD9|928|CD9 molecule##AK308700|CD9|928|CD9 molecule##AK296332|CD9|928|CD9 molecule##AK309527|CD9|928|CD9 molecule##AY966455|CD9|928|CD9 molecule##X60111|CD9|928|CD9 molecule##AK296894|CD9|928|CD9 molecule##AK298431|CD9|928|CD9 molecule##BC011988|CD9|928|CD9 molecule##M38690|CD9|928|CD9 molecule##AY423720|CD9|928|CD9 molecule##DQ891314|CD9|928|CD9 molecule##DQ894498|CD9|928|CD9 molecule##L34068|CD9|928|CD9 molecule##AK001527|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_018173|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC104751|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC105961|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC109095|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6	0.997541	CTCF.p2:-5:0.998
chr9	136303064	136303166	reg1007235.p2	11.735	+	TSC_hg19_v1_chr9_+_136293730 AJ011374	-9375	+	AJ305314 AJ420810 AJ420811 BC103828 BC103829 BC103830 AY055376 TSC_hg19_v1_chr9_+_136287508 AF414401	-15638	+	AB069698 NM_139025 NM_139026 NM_139027 AK292439	-15983	+	NM_001135775 NM_001242369 NM_001242370 NM_017586 AK075416 TSC_hg19_v1_chr9_+_136325120 AK304524 AK074852 AK311325 AK296343 AK075548 BC030558 AJ011373 AY358452 AK298820 CU688906	22024	+	DQ891513 DQ894704 AK294974 BC013740 TSC_hg19_v1_chr9_-_136344222 AJ011372 AK225106 AK222919 AK074836 AK096630 Y17803 AK074927 NM_001145099 NM_017585	41113	-	NM_001080483	86952	-	AJ011374|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ305314|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ420810|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ420811|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103828|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103829|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103830|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AY055376|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AF414401|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AB069698|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_139025|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_139026|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_139027|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AK292439|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_001135775|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242369|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242370|C9orf7|11094|chromosome 9 open reading frame 7##NM_017586|C9orf7|11094|chromosome 9 open reading frame 7##AK075416|C9orf7|11094|chromosome 9 open reading frame 7##AK304524|C9orf7|11094|chromosome 9 open reading frame 7##AK074852|C9orf7|11094|chromosome 9 open reading frame 7##AK311325|C9orf7|11094|chromosome 9 open reading frame 7##AK296343|C9orf7|11094|chromosome 9 open reading frame 7##AK075548|C9orf7|11094|chromosome 9 open reading frame 7##BC030558|C9orf7|11094|chromosome 9 open reading frame 7##AJ011373|C9orf7|11094|chromosome 9 open reading frame 7##AY358452|C9orf7|11094|chromosome 9 open reading frame 7##AK298820|C9orf7|11094|chromosome 9 open reading frame 7##DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001080483|TMEM8C|389827|transmembrane protein 8C	0.981578	CTCF.p2:10:0.982
chr5	176831515	176831632	reg1007277.p3	11.734	+	BC012390 TSC_hg19_v1_chr5_-_176831506	-113	-	TSC_hg19_v1_chr5_-_176831183 BT007350	-348	-	BC132952 BC132954 NM_001029886	-3937	-	M11723 M31315 TSC_hg19_v1_chr5_-_176836522	4932	-	TSC_hg19_v1_chr5_-_176836552 AB095845 NM_000505	4982	-	TSC_hg19_v1_chr5_+_176853676 NM_001004105 NM_001004106 NM_002082 BC009277 L16862 BC017272 AF040751 AF040752 CU677893 CU679285 AB527614	22185	+	BC012390|F12|2161|coagulation factor XII (Hageman factor)##BT007350|F12|2161|coagulation factor XII (Hageman factor)##BC132952|PFN3|345456|profilin 3##BC132954|PFN3|345456|profilin 3##NM_001029886|PFN3|345456|profilin 3##M11723|F12|2161|coagulation factor XII (Hageman factor)##M31315|F12|2161|coagulation factor XII (Hageman factor)##AB095845|F12|2161|coagulation factor XII (Hageman factor)##NM_000505|F12|2161|coagulation factor XII (Hageman factor)##NM_001004105|GRK6|2870|G protein-coupled receptor kinase 6##NM_001004106|GRK6|2870|G protein-coupled receptor kinase 6##NM_002082|GRK6|2870|G protein-coupled receptor kinase 6##BC009277|GRK6|2870|G protein-coupled receptor kinase 6##L16862|GRK6|2870|G protein-coupled receptor kinase 6##BC017272|GRK6|2870|G protein-coupled receptor kinase 6##AF040751|GRK6|2870|G protein-coupled receptor kinase 6##AF040752|GRK6|2870|G protein-coupled receptor kinase 6	0.0	
chr16	17673260	17673392	reg1008356.p1	11.733	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	-108521	-	TSC_hg19_v1_chr16_+_16326508 AB463143	-1346796	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1346838	+	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	900065	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1124770	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	1128329	-	AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a	0.156974	
chr18	23985504	23985629	reg1006524.p1	11.733	+	TSC_hg19_v1_chr18_+_23806444 NM_005640 AB234096	-179149	+	BC042820 NM_001025096 NM_001025097 NM_144662 BC025393 BC028371 BC028686 BC025389 BC047355 BC021713	-271718	+	AB527567 EU832762 GQ129305 AB300354 AB300355 AB300356 AB300357 AF230662 AF244972 AF257500 AF343880 BC096221 BC096222 BC096223 BC096224 CR542088 CR542103 X79201 TSC_hg19_v1_chr18_-_23670574 AK304305 AK316302 AK316338 AK299082 AK307923 AK289510 NM_001007559 NM_005637 AK301504	-314986	-	NM_001142730 TSC_hg19_v1_chr18_-_24128518	142944	-	AK289870 BC063652 TSC_hg19_v1_chr18_-_24129261 NM_001136205	143675	-	AF542549 NM_198991	234741	-	NM_005640|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##AB234096|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##EU832762|SS18|6760|synovial sarcoma translocation, chromosome 18##GQ129305|SS18|6760|synovial sarcoma translocation, chromosome 18##AF244972|SS18|6760|synovial sarcoma translocation, chromosome 18##AF343880|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096221|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096222|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096223|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096224|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542088|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542103|SS18|6760|synovial sarcoma translocation, chromosome 18##X79201|SS18|6760|synovial sarcoma translocation, chromosome 18##AK304305|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316302|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316338|SS18|6760|synovial sarcoma translocation, chromosome 18##AK299082|SS18|6760|synovial sarcoma translocation, chromosome 18##AK307923|SS18|6760|synovial sarcoma translocation, chromosome 18##AK289510|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001007559|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_005637|SS18|6760|synovial sarcoma translocation, chromosome 18##AK301504|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1##AK289870|KCTD1|284252|potassium channel tetramerisation domain containing 1##BC063652|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001136205|KCTD1|284252|potassium channel tetramerisation domain containing 1##AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1	0.638704	CTCF.p2:-20:0.639
chr7	20916	21042	reg1007703.p2	11.732	+	None	None	None	None	None	None	None	None	None	AF533706 NM_020223 TSC_hg19_v1_chr7_+_193043	172038	+	BC040074 TSC_hg19_v1_chr7_+_193137	172166	+	NM_001195127	309156	+	AF533706|FAM20C|56975|family with sequence similarity 20, member C##NM_020223|FAM20C|56975|family with sequence similarity 20, member C##BC040074|FAM20C|56975|family with sequence similarity 20, member C##NM_001195127|LOC100288524|100288524|forkhead box L1-like	1.938905	CTCF.p2:30:0.945	CTCF.p2:-32:0.994
chr11	62980273	62980394	reg1008738.p1	11.731	+	BC034394 NM_001136506	-68641	-	AK307850 AK298341 AB042505 AK298351 AK313187 BC022387 NM_001184732 NM_001184733 NM_001184736 NM_004254	-197035	-	AK298374 AF057039 AF104038 AF124373 AB009698 AB009697 AK091879 BC033682 AK055764 NM_004790 NM_153276 NM_153277 NM_153278	-227901	-	AK127610 BC101315 BC101314 AY437532 BC101316 BC101317 NM_199352	16727	-	AK298430 AB075876 NM_001039752	77067	+	AK074246 BC022379 NM_080866 AB074812 AF440402 BC126288 AB062418 AJ295270 CU692590 HQ258285	157061	+	BC034394|SLC22A24|283238|solute carrier family 22, member 24##NM_001136506|SLC22A24|283238|solute carrier family 22, member 24##AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298374|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF057039|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF104038|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF124373|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009698|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009697|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK091879|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##BC033682|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK055764|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_004790|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153276|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153277|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153278|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK127610|SLC22A25|387601|solute carrier family 22, member 25##BC101315|SLC22A25|387601|solute carrier family 22, member 25##BC101314|SLC22A25|387601|solute carrier family 22, member 25##AY437532|SLC22A25|387601|solute carrier family 22, member 25##BC101316|SLC22A25|387601|solute carrier family 22, member 25##BC101317|SLC22A25|387601|solute carrier family 22, member 25##NM_199352|SLC22A25|387601|solute carrier family 22, member 25##AK298430|SLC22A10|387775|solute carrier family 22, member 10##AB075876|SLC22A10|387775|solute carrier family 22, member 10##NM_001039752|SLC22A10|387775|solute carrier family 22, member 10##AK074246|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##BC022379|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##NM_080866|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AB074812|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AF440402|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##BC126288|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AB062418|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AJ295270|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##HQ258285|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9	0.811729	CTCF.p2:10:0.812
chr11	5402111	5402220	reg1006909.p2	11.730	+	AB463972 NM_001004750	-29428	+	HQ258158 BC117461 NM_033180	-56610	-	BC100919 BC069094 BC148186 BC153815 NM_033179	-78991	-	BC136912 BC136913 NM_001004756	8441	+	BC136999 NM_001004757	41175	+	BC151148 NM_001005288	60617	-	NM_001004750|OR51B6|390058|olfactory receptor, family 51, subfamily B, member 6##HQ258158|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2##BC117461|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2##NM_033180|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2##BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC136912|OR51M1|390059|olfactory receptor, family 51, subfamily M, member 1##BC136913|OR51M1|390059|olfactory receptor, family 51, subfamily M, member 1##NM_001004756|OR51M1|390059|olfactory receptor, family 51, subfamily M, member 1##BC136999|OR51Q1|390061|olfactory receptor, family 51, subfamily Q, member 1##NM_001004757|OR51Q1|390061|olfactory receptor, family 51, subfamily Q, member 1##BC151148|OR51I1|390063|olfactory receptor, family 51, subfamily I, member 1##NM_001005288|OR51I1|390063|olfactory receptor, family 51, subfamily I, member 1	0.884876	CTCF.p2:2:0.885
chr14	106052181	106052315	reg1008702.p1	11.730	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-59307	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-94612	+	BX248038 NM_001134877	-95729	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	40088	-	BC040042 TSC_hg19_v1_chr14_-_106110945	58675	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	58868	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	1.006966	CTCF.p2:6:0.995
chr15	66149305	66149430	reg1009379.p1	11.725	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-64774	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	-64894	-	AF062922 NM_004727	-235098	+	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	12480	+	TSC_hg19_v1_chr15_-_66321664 AK054827	172326	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	396710	-	AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11	0.994585	CTCF.p2:4:0.995
chr16	2610879	2610991	reg1007610.p2	11.725	+	BC033494 TSC_hg19_v1_chr16_+_2588066 AB463382 DQ892297 DQ895496 EU832784 GQ129441 CU689632 CR536517 BC040324	-22828	+	AK131060 AK222581 AK293900 TSC_hg19_v1_chr16_+_2588021 AF017995 Y15056	-22900	+	TSC_hg19_v1_chr16_+_2588020 BC006339 BC012103	-22925	+	AK096394 TSC_hg19_v1_chr16_+_2653445 BC093998 BC111952 AK291606 BC062576 BC036664 BC056242 BC105289 BC080650	42482	+	BC063714 TSC_hg19_v1_chr16_-_2723400 AK091794 AX747190 BC043252	112470	-	TSC_hg19_v1_chr16_+_2732524 NM_018992 AK000047	121564	+	BC033494|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##DQ892297|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##DQ895496|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##EU832784|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##GQ129441|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##CR536517|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##BC040324|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK131060|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK222581|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK293900|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AF017995|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##Y15056|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##BC006339|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##BC012103|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK096394|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC093998|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC111952|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##AK291606|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC062576|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC036664|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC056242|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC105289|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC080650|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##AK091794|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##AX747190|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##BC043252|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##NM_018992|KCTD5|54442|potassium channel tetramerisation domain containing 5##AK000047|KCTD5|54442|potassium channel tetramerisation domain containing 5	0.979903	CTCF.p2:0:0.980
chr19	53698671	53698782	reg1007666.p1	11.725	+	AL832507 AK291403 AK096261 NM_024733	-2116	-	BC002938 BC015611 TSC_hg19_v1_chr19_-_53662285 AY029765 AK289994 AK314603 AK096623 NM_001172674 NM_001172675 NM_032584	-36426	-	DQ925695 DQ925698 BC069668 BC063880 DQ925696 AK002053 AK095504 AY283600 NM_018355 DQ925697 NM_001136038 NM_001164309	-62578	-	BC029855 TSC_hg19_v1_chr19_-_53758075 AK026366	59285	-	TSC_hg19_v1_chr19_-_53758116 BC050038 NM_182609 AK308120 BX648243 AX721115	59397	-	BC130356 BC130358 NM_173856 HQ258205	62860	+	AL832507|ZNF665|79788|zinc finger protein 665##AK291403|ZNF665|79788|zinc finger protein 665##AK096261|ZNF665|79788|zinc finger protein 665##NM_024733|ZNF665|79788|zinc finger protein 665##BC002938|ZNF347|84671|zinc finger protein 347##BC015611|ZNF347|84671|zinc finger protein 347##AY029765|ZNF347|84671|zinc finger protein 347##AK289994|ZNF347|84671|zinc finger protein 347##AK314603|ZNF347|84671|zinc finger protein 347##AK096623|ZNF347|84671|zinc finger protein 347##NM_001172674|ZNF347|84671|zinc finger protein 347##NM_001172675|ZNF347|84671|zinc finger protein 347##NM_032584|ZNF347|84671|zinc finger protein 347##DQ925695|ZNF415|55786|zinc finger protein 415##DQ925698|ZNF415|55786|zinc finger protein 415##BC069668|ZNF415|55786|zinc finger protein 415##BC063880|ZNF415|55786|zinc finger protein 415##DQ925696|ZNF415|55786|zinc finger protein 415##AK002053|ZNF415|55786|zinc finger protein 415##AK095504|ZNF415|55786|zinc finger protein 415##AY283600|ZNF415|55786|zinc finger protein 415##NM_018355|ZNF415|55786|zinc finger protein 415##DQ925697|ZNF415|55786|zinc finger protein 415##NM_001136038|ZNF415|55786|zinc finger protein 415##NM_001164309|ZNF415|55786|zinc finger protein 415##BC029855|ZNF677|342926|zinc finger protein 677##AK026366|ZNF677|342926|zinc finger protein 677##BC050038|ZNF677|342926|zinc finger protein 677##NM_182609|ZNF677|342926|zinc finger protein 677##AK308120|ZNF677|342926|zinc finger protein 677##BX648243|ZNF677|342926|zinc finger protein 677##BC130356|VN1R2|317701|vomeronasal 1 receptor 2##BC130358|VN1R2|317701|vomeronasal 1 receptor 2##NM_173856|VN1R2|317701|vomeronasal 1 receptor 2##HQ258205|VN1R2|317701|vomeronasal 1 receptor 2	0.098057	
chr5	78852122	78852249	reg1008256.p1	11.725	+	BC047438 NM_004272	-42507	-	TSC_hg19_v1_chr5_+_78532339 AB590691	-319781	+	TSC_hg19_v1_chr5_+_78531933 NM_152405	-320294	+	NM_001114393 NM_001114394 NM_173797 TSC_hg19_v1_chr5_+_78908290 AL833136 BC047581	56081	+	TSC_hg19_v1_chr5_+_78908296 BC026061	56130	+	AK095818 TSC_hg19_v1_chr5_+_78908395	56236	+	BC047438|HOMER1|9456|homer homolog 1 (Drosophila)##NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)##NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor##NM_001114393|PAPD4|167153|PAP associated domain containing 4##NM_001114394|PAPD4|167153|PAP associated domain containing 4##NM_173797|PAPD4|167153|PAP associated domain containing 4##AL833136|PAPD4|167153|PAP associated domain containing 4##BC047581|PAPD4|167153|PAP associated domain containing 4##BC026061|PAPD4|167153|PAP associated domain containing 4##AK095818|PAPD4|167153|PAP associated domain containing 4	0.67146	CTCF.p2:-10:0.671
chr6	25027531	25027655	reg1007857.p1	11.725	+	TSC_hg19_v1_chr6_-_24936189 AK299047	-91410	-	AB002384 NM_014722	-116399	-	U49187 AK300138 BC001232 NM_015864	-150076	-	TSC_hg19_v1_chr6_+_25279316 BC040903	251725	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	252065	+	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	252301	+	AK299047|FAM65B|9750|family with sequence similarity 65, member B##AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A	0.0	
chr7	132265596	132265708	reg1007450.p2	11.724	+	TSC_hg19_v1_chr7_-_132261268 NM_001105543 NM_020911	-4357	-	AK123428 TSC_hg19_v1_chr7_-_132261230	-4422	-	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	-72732	-	BC028744 NM_181775	67794	-	AB528286 TSC_hg19_v1_chr7_-_132766813 AK294071 AK000427 NM_017812 AK310236	501112	-	TSC_hg19_v1_chr7_-_132766851 BC011596 BC014839 AK129533	501194	-	NM_001105543|PLXNA4|91584|plexin A4##NM_020911|PLXNA4|91584|plexin A4##AK123428|PLXNA4|91584|plexin A4##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4##BC028744|PLXNA4|91584|plexin A4##NM_181775|PLXNA4|91584|plexin A4##AK294071|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK000427|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##NM_017812|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK310236|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC011596|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC014839|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK129533|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3	0.996769	CTCF.p2:10:0.997
chr14	20999247	20999376	reg1006834.p1	11.723	+	BC133002 BC133028 AY665805 NM_001012975	-20691	+	NM_000270 BC106074 AK307340 AK307364 AK313490 X00737 TSC_hg19_v1_chr14_+_20937568 AK098544 BC104206 BC104207 AB591016	-61702	+	BC020947 BX161490 NM_001100814 NM_144568 TSC_hg19_v1_chr14_-_20929650 AK314021	-69609	-	AY907670 EF061296 EF061297 EF061298 EF061299 EF061300 EF061301 EF061302 EF061303 EF061304 NM_001001673 NM_001110356 NM_001110357 NM_001110358 NM_001110359 NM_001110360 NM_001110361	29778	-	BX161458 NM_145250	59091	-	HQ258082 AY665807 BC130347 BC130349 NM_001024822	59619	-	BC133002|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)##BC133028|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)##AY665805|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)##NM_001012975|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)##NM_000270|PNP|4860|purine nucleoside phosphorylase##BC106074|PNP|4860|purine nucleoside phosphorylase##AK307340|PNP|4860|purine nucleoside phosphorylase##AK307364|PNP|4860|purine nucleoside phosphorylase##AK313490|PNP|4860|purine nucleoside phosphorylase##X00737|PNP|4860|purine nucleoside phosphorylase##AK098544|PNP|4860|purine nucleoside phosphorylase##BC104206|PNP|4860|purine nucleoside phosphorylase##BC104207|PNP|4860|purine nucleoside phosphorylase##BC020947|TMEM55B|90809|transmembrane protein 55B##BX161490|TMEM55B|90809|transmembrane protein 55B##NM_001100814|TMEM55B|90809|transmembrane protein 55B##NM_144568|TMEM55B|90809|transmembrane protein 55B##AK314021|TMEM55B|90809|transmembrane protein 55B##AY907670|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061296|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061297|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061298|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061299|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061300|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061301|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061302|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061303|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061304|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001001673|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110356|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110357|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110358|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110359|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110360|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110361|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##BX161458|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##NM_145250|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##HQ258082|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##AY665807|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BC130347|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BC130349|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##NM_001024822|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)	0.999621	CTCF.p2:12:1.000
chr1	7707410	7707520	reg1007476.p1	11.723	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-861974	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-945534	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-945583	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	123911	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	136944	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	137360	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.999899	CTCF.p2:10:1.000
chr2	68979007	68979131	reg1007105.p1	11.723	+	NM_001007231 NM_001166277 AK297056 TSC_hg19_v1_chr2_+_68962066 AK310742 AK290396	-16996	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	-106116	+	TSC_hg19_v1_chr2_+_68694716 AK290841 NM_173545 AK308186 BC041144 CU691972	-284305	+	BC032222 NM_001166276 NM_014882 AK311669 TSC_hg19_v1_chr2_+_69002068 BC039591 AK297157 AK298669 D29642	22956	+	BC069080 BC101734 BC105063 AF101441 NM_014482	119506	-	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	200987	-	NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25##AK297056|ARHGAP25|9938|Rho GTPase activating protein 25##AK310742|ARHGAP25|9938|Rho GTPase activating protein 25##AK290396|ARHGAP25|9938|Rho GTPase activating protein 25##AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1##AK290841|APLF|200558|aprataxin and PNKP like factor##NM_173545|APLF|200558|aprataxin and PNKP like factor##AK308186|APLF|200558|aprataxin and PNKP like factor##BC041144|APLF|200558|aprataxin and PNKP like factor##BC032222|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166276|ARHGAP25|9938|Rho GTPase activating protein 25##NM_014882|ARHGAP25|9938|Rho GTPase activating protein 25##AK311669|ARHGAP25|9938|Rho GTPase activating protein 25##BC039591|ARHGAP25|9938|Rho GTPase activating protein 25##AK297157|ARHGAP25|9938|Rho GTPase activating protein 25##AK298669|ARHGAP25|9938|Rho GTPase activating protein 25##D29642|ARHGAP25|9938|Rho GTPase activating protein 25##BC069080|BMP10|27302|bone morphogenetic protein 10##BC101734|BMP10|27302|bone morphogenetic protein 10##BC105063|BMP10|27302|bone morphogenetic protein 10##AF101441|BMP10|27302|bone morphogenetic protein 10##NM_014482|BMP10|27302|bone morphogenetic protein 10##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2	1.066482	CTCF.p2:-13:1.000
chr1	18311119	18311240	reg1009800.p1	11.722	+	AK057339 NM_030812 BC028909 U20582	-229333	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	-366314	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	-404164	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	123098	+	NM_152375	496244	+	NM_001135254 NM_002584 NM_013945 X96743	646320	+	AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##NM_152375|KLHDC7A|127707|kelch domain containing 7A##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7	0.318225	CTCF.p2:9:0.318
chr17	75062994	75063110	reg1007672.p1	11.722	+	AB114297 NM_198955 BC144361	-194292	+	TSC_hg19_v1_chr17_+_74864556 AK057861 AB235153 BC041577 NM_001199172 NM_144677 BC062354	-198386	+	TSC_hg19_v1_chr17_+_74734111 AK308058 AF015184 AK000233	-328899	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	21745	+	NM_001204410 FM995496 AF130050	22216	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	73982	+	AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AK308058|MFSD11|79157|major facilitator superfamily domain containing 11##AF015184|MFSD11|79157|major facilitator superfamily domain containing 11##AK000233|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001204410|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995496|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AF130050|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)	0.997596	CTCF.p2:7:0.998
chr18	55229169	55229300	reg1006367.p1	11.722	+	TSC_hg19_v1_chr18_+_55102810 NM_004852 Y18198 BC108925 BC108926	-126369	+	AB208996 NM_015879	-209514	+	AK127964 TSC_hg19_v1_chr18_+_54814333 BC021740 BC035018 AK301799	-414895	+	TSC_hg19_v1_chr18_-_55253912 AK223190 BX571744 AB529061 BT019958 BT019959 AK292937 D00726 AK299643 AK092416 BC039841 NM_000140 NM_001012515	24685	-	TSC_hg19_v1_chr18_-_55287856 AB528053	58636	-	CU674834 TSC_hg19_v1_chr18_-_55288981 AK129897 D84273	59733	-	NM_004852|ONECUT2|9480|one cut homeobox 2##Y18198|ONECUT2|9480|one cut homeobox 2##BC108925|ONECUT2|9480|one cut homeobox 2##BC108926|ONECUT2|9480|one cut homeobox 2##AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##AK127964|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC021740|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC035018|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK301799|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK223190|FECH|2235|ferrochelatase##BX571744|FECH|2235|ferrochelatase##BT019958|FECH|2235|ferrochelatase##BT019959|FECH|2235|ferrochelatase##AK292937|FECH|2235|ferrochelatase##D00726|FECH|2235|ferrochelatase##AK299643|FECH|2235|ferrochelatase##AK092416|FECH|2235|ferrochelatase##BC039841|FECH|2235|ferrochelatase##NM_000140|FECH|2235|ferrochelatase##NM_001012515|FECH|2235|ferrochelatase##AK129897|NARS|4677|asparaginyl-tRNA synthetase##D84273|NARS|4677|asparaginyl-tRNA synthetase	0.997645	CTCF.p2:27:0.998
chr5	125689743	125689874	reg1007568.p1	11.722	+	BC131507 AB033107 BC151226 NM_020747	-1609020	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-2841926	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-2930664	-	NM_001146319 AK316288 AK300154	6006	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	69035	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	69379	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.988811	CTCF.p2:-23:0.989
chr5	158743939	158744040	reg1007007.p1	11.722	+	TSC_hg19_v1_chr5_+_158690297 AY444562 AK057996 BC013425	-53703	+	NM_145049	-53901	+	AK308394 NM_001199380	-106929	-	BC074723 M65272 NM_002187	13485	-	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	599836	+	TSC_hg19_v1_chr5_+_159436145 AK315262	692158	+	AY444562|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK057996|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##BC013425|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_145049|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK308394|RNF145|153830|ring finger protein 145##NM_001199380|RNF145|153830|ring finger protein 145##BC074723|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##M65272|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_002187|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##AK315262|TTC1|7265|tetratricopeptide repeat domain 1	0.979449	CTCF.p2:-5:0.979
chr18	44061162	44061276	reg1009243.p1	11.721	+	AK091537 AK122819 AK127467 AX747044 NM_152470	-147033	+	TSC_hg19_v1_chr18_+_43913942 AK055997	-147287	+	TSC_hg19_v1_chr18_+_43754065 AK289738	-307137	+	AK057232 BC047720 NM_001145473 NM_001173129	37821	-	BC041860 AK302484 NM_001145472	78041	-	NM_144612	175776	-	AK091537|RNF165-IT1|147341|RNF165 intronic transcript 1 (non-protein coding)##AK122819|RNF165|494470|ring finger protein 165##AK127467|RNF165|494470|ring finger protein 165##NM_152470|RNF165|494470|ring finger protein 165##AK055997|RNF165|494470|ring finger protein 165##AK289738|C18orf25|147339|chromosome 18 open reading frame 25##AK057232|LOXHD1|125336|lipoxygenase homology domains 1##BC047720|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145473|LOXHD1|125336|lipoxygenase homology domains 1##NM_001173129|LOXHD1|125336|lipoxygenase homology domains 1##BC041860|LOXHD1|125336|lipoxygenase homology domains 1##AK302484|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145472|LOXHD1|125336|lipoxygenase homology domains 1##NM_144612|LOXHD1|125336|lipoxygenase homology domains 1	0.0	
chr4	106062190	106062324	reg1009197.p1	11.721	+	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	-646204	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	-649775	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-1421357	-	BX640738 NM_017628	4774	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	5554	+	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	5787	+	AK127778|CXXC4|80319|CXXC finger protein 4##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2	0.754658	CTCF.p2:-16:0.755
chr6	137736862	137736986	reg1006553.p2	11.721	+	TSC_hg19_v1_chr6_-_137540556 NM_000416	-196366	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-196379	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	-196412	-	BC051352 AK096362 NM_175747	78601	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	451613	+	TSC_hg19_v1_chr6_-_138189314 AK124173	452426	-	NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3	0.212846	CTCF.p2:2:0.213
chr2	159610640	159610765	reg1008635.p1	11.718	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-297119	+	TSC_hg19_v1_chr2_+_159313419 BC034473	-297267	+	CU677295 BC105928 BC107596 BC107597 AK123220 AK058105 AF458588 BC015395 AK309246 TSC_hg19_v1_chr2_-_159313250 AK308783 AK311042 NM_001171637 NM_138803	-297593	-	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	41133	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	214445	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	532446	-	NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##BC034473|PKP4|8502|plakophilin 4##BC105928|CCDC148|130940|coiled-coil domain containing 148##BC107596|CCDC148|130940|coiled-coil domain containing 148##BC107597|CCDC148|130940|coiled-coil domain containing 148##AK123220|CCDC148|130940|coiled-coil domain containing 148##AK058105|CCDC148|130940|coiled-coil domain containing 148##AF458588|CCDC148|130940|coiled-coil domain containing 148##BC015395|CCDC148|130940|coiled-coil domain containing 148##AK309246|CCDC148|130940|coiled-coil domain containing 148##AK308783|CCDC148|130940|coiled-coil domain containing 148##AK311042|CCDC148|130940|coiled-coil domain containing 148##NM_001171637|CCDC148|130940|coiled-coil domain containing 148##NM_138803|CCDC148|130940|coiled-coil domain containing 148##AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1	1.006476	CTCF.p2:14:0.991
chr15	90764641	90764755	reg1007696.p2	11.717	+	TSC_hg19_v1_chr15_+_90744561 AY445887 NM_198925 AB051532 BC126438 BC144141 BC110853 AB385501 HQ258520 AK026108	-20008	+	TSC_hg19_v1_chr15_+_90728151 NM_020210 AK289991 AY358392	-36502	+	TSC_hg19_v1_chr15_-_90645713 AK312627	-118971	-	TSC_hg19_v1_chr15_-_90777138 AB451276 AB451406 AB463454 CR456955 DQ891196 DQ894379	12430	-	TSC_hg19_v1_chr15_-_90777174 BC000846 U85611 U82226	12467	-	TSC_hg19_v1_chr15_-_90777199 NM_006384	12536	-	AY445887|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_198925|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB051532|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC126438|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC144141|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC110853|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##HQ258520|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK026108|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_020210|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK289991|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY358392|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AB451276|CIB1|10519|calcium and integrin binding 1 (calmyrin)##AB451406|CIB1|10519|calcium and integrin binding 1 (calmyrin)##CR456955|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ891196|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ894379|CIB1|10519|calcium and integrin binding 1 (calmyrin)##BC000846|CIB1|10519|calcium and integrin binding 1 (calmyrin)##U85611|CIB1|10519|calcium and integrin binding 1 (calmyrin)##U82226|CIB1|10519|calcium and integrin binding 1 (calmyrin)##NM_006384|CIB1|10519|calcium and integrin binding 1 (calmyrin)	0.575354	CTCF.p2:2:0.446
chr11	16807190	16807318	reg1009746.p1	11.716	+	TSC_hg19_v1_chr11_+_16760204 BC103747 AK315382 BC007103 BC016352 BC020937 U51678 CR456882 CU675547 AK124165	-46970	+	NM_014267 TSC_hg19_v1_chr11_+_16760165	-47094	+	AF309034 NM_033326	-309329	-	TSC_hg19_v1_chr11_-_16996590 D28414	189322	-	AB385210 TSC_hg19_v1_chr11_-_17035962 BC071599 NM_175058	228711	-	X79239 AB528349 CU688732 TSC_hg19_v1_chr11_-_17099216 DQ891107 DQ894288 BC000475 BC029732 BC100032 BC006772 AK312060 BC066322 D28429 L01124 NM_001017	291985	-	BC103747|C11orf58|10944|chromosome 11 open reading frame 58##AK315382|C11orf58|10944|chromosome 11 open reading frame 58##BC007103|C11orf58|10944|chromosome 11 open reading frame 58##BC016352|C11orf58|10944|chromosome 11 open reading frame 58##BC020937|C11orf58|10944|chromosome 11 open reading frame 58##U51678|C11orf58|10944|chromosome 11 open reading frame 58##CR456882|C11orf58|10944|chromosome 11 open reading frame 58##NM_014267|C11orf58|10944|chromosome 11 open reading frame 58##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6##D28414|RPL36A|6173|ribosomal protein L36a##BC071599|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##NM_175058|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##X79239|RPS13|6207|ribosomal protein S13##DQ891107|RPS13|6207|ribosomal protein S13##DQ894288|RPS13|6207|ribosomal protein S13##BC000475|RPS13|6207|ribosomal protein S13##BC029732|RPS13|6207|ribosomal protein S13##BC100032|RPS13|6207|ribosomal protein S13##BC006772|RPS13|6207|ribosomal protein S13##AK312060|RPS13|6207|ribosomal protein S13##BC066322|RPS13|6207|ribosomal protein S13##L01124|RPS13|6207|ribosomal protein S13##NM_001017|RPS13|6207|ribosomal protein S13	0.999661	CTCF.p2:-6:1.000
chr11	65990253	65990380	reg1007900.p1	11.716	+	TSC_hg19_v1_chr11_+_65988172 BC055288	-2121	+	TSC_hg19_v1_chr11_+_65984213 AB033001	-6094	+	TSC_hg19_v1_chr11_+_65837841 AK096644 NM_018026 AK098336 AY320283 BC010096 BC052577	-152406	+	AK293966 TSC_hg19_v1_chr11_+_65998046 BC042909	7659	+	TSC_hg19_v1_chr11_+_66024752 NM_001134775	34439	+	TSC_hg19_v1_chr11_+_66025238 NM_001134776 NM_001134774 NM_022822 AK022907 AK315725 AL136864 BC034373 AK022449	34873	+	BC055288|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AB033001|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AK096644|PACS1|55690|phosphofurin acidic cluster sorting protein 1##NM_018026|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AK098336|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AY320283|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC010096|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC052577|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AK293966|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC042909|PACS1|55690|phosphofurin acidic cluster sorting protein 1##NM_001134775|KLC2|64837|kinesin light chain 2##NM_001134776|KLC2|64837|kinesin light chain 2##NM_001134774|KLC2|64837|kinesin light chain 2##NM_022822|KLC2|64837|kinesin light chain 2##AK022907|KLC2|64837|kinesin light chain 2##AK315725|KLC2|64837|kinesin light chain 2##AL136864|KLC2|64837|kinesin light chain 2##BC034373|KLC2|64837|kinesin light chain 2##AK022449|KLC2|64837|kinesin light chain 2	0.975014	CTCF.p2:5:0.952
chr14	24101274	24101407	reg1008403.p1	11.716	+	BC055429 TSC_hg19_v1_chr14_-_24048004 AB058734 NM_001146028 NM_032452	-53340	-	TSC_hg19_v1_chr14_-_24047779 AK091572 AX747068	-53542	-	AK290511 TSC_hg19_v1_chr14_-_24047453	-53873	-	AK222857 NM_005794 NM_182908 AK309945 BC002786 U31875	4238	+	TSC_hg19_v1_chr14_-_24422882 BX247982	321536	-	TSC_hg19_v1_chr14_+_24422978 AY616182 DQ344810 NM_021004 AY358638 AF064256 AF044127 AK001870 AK308436 DQ325464 AK314448 AY071856 BC003019 AK301201 DQ338571	321687	+	BC055429|JPH4|84502|junctophilin 4##AB058734|JPH4|84502|junctophilin 4##NM_001146028|JPH4|84502|junctophilin 4##NM_032452|JPH4|84502|junctophilin 4##AK091572|JPH4|84502|junctophilin 4##AK290511|JPH4|84502|junctophilin 4##AK222857|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##NM_005794|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##NM_182908|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##AK309945|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##BC002786|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##U31875|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##BX247982|C14orf167|55449|chromosome 14 open reading frame 167##AY616182|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ344810|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##NM_021004|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY358638|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF064256|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF044127|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK001870|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK308436|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ325464|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK314448|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY071856|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##BC003019|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ338571|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4	0.969469	CTCF.p2:-8:0.969
chr22	25444791	25444915	reg1008723.p1	11.716	+	BC171801 NM_001145206	-20913	+	BC130647 BC130649 CR456388 NM_001001663	-109541	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-242643	+	TSC_hg19_v1_chr22_+_25591072 AK025418	146276	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	150991	+	NM_000496	170758	+	BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AK025418|KIAA1671|85379|KIAA1671##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##NM_000496|CRYBB2|1415|crystallin, beta B2	0.99935	CTCF.p2:5:0.999
chrX	119903961	119904079	reg1007137.p1	11.716	+	TSC_hg19_v1_chrX_-_119763907 BC011930 AY358642 AF161552 AY159319 AB084170 AF177284 AK290111 BC012502 BC050441 AJ238398 NM_001011551 NM_152692	-140116	-	TSC_hg19_v1_chrX_+_119738553 NM_001137554 AK294834	-165458	+	TSC_hg19_v1_chrX_+_119737985 BC001013 CU674498 AY364258	-165983	+	NM_001145718	105758	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	162130	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080141 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	166991	-	BC011930|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AY358642|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AF161552|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AY159319|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AB084170|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AF177284|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AK290111|C1GALT1C1|29071|C1GALT1-specific chaperone 1##BC012502|C1GALT1C1|29071|C1GALT1-specific chaperone 1##BC050441|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AJ238398|C1GALT1C1|29071|C1GALT1-specific chaperone 1##NM_001011551|C1GALT1C1|29071|C1GALT1-specific chaperone 1##NM_152692|C1GALT1C1|29071|C1GALT1-specific chaperone 1##NM_001137554|MCTS1|28985|malignant T cell amplified sequence 1##AK294834|MCTS1|28985|malignant T cell amplified sequence 1##BC001013|MCTS1|28985|malignant T cell amplified sequence 1##AY364258|MCTS1|28985|malignant T cell amplified sequence 1##NM_001145718|CT47B1|643311|cancer/testis antigen family 47, member B1##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11	0.975819	CTCF.p2:12:0.976
chrX	56830102	56830233	reg1004127.p4	11.716	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-74476	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-240116	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-571257	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	191804	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	317761	-	BC071694 NM_019003	333890	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.756665	CTCF.p2:-1:0.757
chr3	106954833	106954952	reg1005527.p1	11.715	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-1367085	-	CR749655 TSC_hg19_v1_chr3_-_105421064	-1533838	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-1869070	+	TSC_hg19_v1_chr3_-_106959482 BC036229	4587	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	4700	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	141418	+	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54	0.998527	CTCF.p2:-9:0.999
chr5	137558602	137558737	reg1007418.p2	11.715	+	AK304635 TSC_hg19_v1_chr5_-_137549034 NM_004661	-9638	-	AF191341 BT009810 AB590268 DQ891686 DQ894870 TSC_hg19_v1_chr5_-_137549013 BC017713 AF053977 BC005258 BC010944 AK291610 AB011472 AK223250	-9666	-	TSC_hg19_v1_chr5_+_137514857 AK296879 AK025790 AF153329 BC012999	-43854	+	AF051767 DQ890850 DQ894004 BC037951 AY358997 AK314022 AK297693 NM_001496 AY359037 TSC_hg19_v1_chr5_-_137610343	51559	-	M34065 BC019089 TSC_hg19_v1_chr5_-_137667469 NM_001790 NM_022809	108824	-	NM_001135647 TSC_hg19_v1_chr5_+_137673265 BC052993	114585	+	AK304635|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##NM_004661|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AF191341|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##BT009810|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##DQ891686|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##DQ894870|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##BC017713|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AF053977|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##BC005258|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##BC010944|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AK291610|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AB011472|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AK223250|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AK296879|KIF20A|10112|kinesin family member 20A##AK025790|KIF20A|10112|kinesin family member 20A##AF153329|KIF20A|10112|kinesin family member 20A##BC012999|KIF20A|10112|kinesin family member 20A##AF051767|GFRA3|2676|GDNF family receptor alpha 3##DQ890850|GFRA3|2676|GDNF family receptor alpha 3##DQ894004|GFRA3|2676|GDNF family receptor alpha 3##BC037951|GFRA3|2676|GDNF family receptor alpha 3##AY358997|GFRA3|2676|GDNF family receptor alpha 3##AK314022|GFRA3|2676|GDNF family receptor alpha 3##AK297693|GFRA3|2676|GDNF family receptor alpha 3##NM_001496|GFRA3|2676|GDNF family receptor alpha 3##AY359037|GFRA3|2676|GDNF family receptor alpha 3##M34065|CDC25C|995|cell division cycle 25 homolog C (S. pombe)##BC019089|CDC25C|995|cell division cycle 25 homolog C (S. pombe)##NM_001790|CDC25C|995|cell division cycle 25 homolog C (S. pombe)##NM_022809|CDC25C|995|cell division cycle 25 homolog C (S. pombe)##NM_001135647|FAM53C|51307|family with sequence similarity 53, member C##BC052993|FAM53C|51307|family with sequence similarity 53, member C	0.344082	CTCF.p2:-17:0.344
chr5	161636121	161636236	reg1007522.p1	11.714	+	NM_000816 NM_198903 NM_198904 BC052926 BC036030 X15376 BC059389 BC069348 BC074795 AK315200 AK299640	-141333	+	NM_001127648 AB590312 DQ890915	-358419	+	NM_001127647	-358787	+	TSC_hg19_v1_chr5_+_162864606 AK316234 NM_004060 NM_199246 AK297190 AK312913 BC007093 BX538035 D78341 L49504 BC000196	1228443	+	AB528197 AM392736 AM393438 FJ215684 AK094647 TSC_hg19_v1_chr5_-_162887097	1250900	-	AK311957 TSC_hg19_v1_chr5_-_162887119 BC017934 BX538290 NM_145266	1250955	-	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127647|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK316234|CCNG1|900|cyclin G1##NM_004060|CCNG1|900|cyclin G1##NM_199246|CCNG1|900|cyclin G1##AK297190|CCNG1|900|cyclin G1##AK312913|CCNG1|900|cyclin G1##BC007093|CCNG1|900|cyclin G1##BX538035|CCNG1|900|cyclin G1##D78341|CCNG1|900|cyclin G1##L49504|CCNG1|900|cyclin G1##BC000196|CCNG1|900|cyclin G1##AM392736|NUDCD2|134492|NudC domain containing 2##AM393438|NUDCD2|134492|NudC domain containing 2##FJ215684|NUDCD2|134492|NudC domain containing 2##AK311957|NUDCD2|134492|NudC domain containing 2##BC017934|NUDCD2|134492|NudC domain containing 2##BX538290|NUDCD2|134492|NudC domain containing 2##NM_145266|NUDCD2|134492|NudC domain containing 2	0.987781	CTCF.p2:-6:0.988
chr8	10405704	10405811	reg1006134.p1	11.714	+	BC033497 NM_001197020 NM_198464 AY358867	-22690	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	-452694	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	-493878	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	106883	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	124402	+	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	182227	-	BC033497|PRSS55|203074|protease, serine, 55##NM_001197020|PRSS55|203074|protease, serine, 55##NM_198464|PRSS55|203074|protease, serine, 55##AY358867|PRSS55|203074|protease, serine, 55##AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7	0.979057	CTCF.p2:-1:0.968
chr14	37022995	37023116	reg1008020.p1	11.713	+	BT009773 DQ892964 DQ896211 D50740 BC006221 U43203 NM_001079668	-33674	-	NM_003317 U33749	-34153	-	TSC_hg19_v1_chr14_-_36982983 BC042093 NM_001101341	-40073	-	BC041090 NM_014360 AF000295 AK313537	28743	-	NM_006194	103717	+	TSC_hg19_v1_chr14_+_37131069 BC001159	108029	+	BT009773|NKX2-1|7080|NK2 homeobox 1##DQ892964|NKX2-1|7080|NK2 homeobox 1##DQ896211|NKX2-1|7080|NK2 homeobox 1##D50740|NKX2-1|7080|NK2 homeobox 1##BC006221|NKX2-1|7080|NK2 homeobox 1##U43203|NKX2-1|7080|NK2 homeobox 1##NM_001079668|NKX2-1|7080|NK2 homeobox 1##NM_003317|NKX2-1|7080|NK2 homeobox 1##U33749|NKX2-1|7080|NK2 homeobox 1##BC042093|SFTA3|253970|surfactant associated 3##NM_001101341|SFTA3|253970|surfactant associated 3##BC041090|NKX2-8|26257|NK2 homeobox 8##NM_014360|NKX2-8|26257|NK2 homeobox 8##AF000295|NKX2-8|26257|NK2 homeobox 8##AK313537|NKX2-8|26257|NK2 homeobox 8##NM_006194|PAX9|5083|paired box 9##BC001159|PAX9|5083|paired box 9	0.37565	CTCF.p2:-1:0.376
chr20	49094905	49095046	reg1009194.p1	11.713	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	-287345	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	-287594	+	NM_005194 TSC_hg19_v1_chr20_+_48807197	-287782	+	TSC_hg19_v1_chr20_+_49126895 AK290638 NM_002827	31901	+	TSC_hg19_v1_chr20_+_49126916 AK316563	31938	+	AK299830 TSC_hg19_v1_chr20_+_49126919	31944	+	EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK290638|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##NM_002827|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK316563|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1	0.013795	
chr2	23574501	23574640	reg1009316.p1	11.713	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2307641	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-2307671	-	TSC_hg19_v1_chr2_-_21266818 AB587530 HM487065 M14081 M14162 BC051278	-2307749	-	NM_052920	33727	+	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	575376	-	TSC_hg19_v1_chr2_+_24150144 BC037901	575587	+	AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##HM487065|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14081|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14162|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC051278|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A	0.110692	
chr17	17217038	17217157	reg1006641.p2	11.712	+	TSC_hg19_v1_chr17_+_17206686 AF210652 NM_020201 BC035838	-10432	+	TSC_hg19_v1_chr17_-_17184612 BC001891 NM_003653	-32492	-	AB529019 CU674916 AK297706 AF031647 TSC_hg19_v1_chr17_-_17184588 AF098109 AK312476	-32553	-	NM_001243312	105560	+	TSC_hg19_v1_chr17_+_17380313 AK001055 NM_018019 BC000647 BC010906 BC104988 BC112029 AB463869	163218	+	TSC_hg19_v1_chr17_+_17398334 CU676147	181289	+	AF210652|NT5M|56953|5',3'-nucleotidase, mitochondrial##NM_020201|NT5M|56953|5',3'-nucleotidase, mitochondrial##BC035838|NT5M|56953|5',3'-nucleotidase, mitochondrial##BC001891|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##NM_003653|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AK297706|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AF031647|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AF098109|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##AK312476|COPS3|8533|COP9 constitutive photomorphogenic homolog subunit 3 (Arabidopsis)##NM_001243312|SMCR9|140776|Smith-Magenis syndrome chromosome region, candidate 9##AK001055|MED9|55090|mediator complex subunit 9##NM_018019|MED9|55090|mediator complex subunit 9##BC000647|MED9|55090|mediator complex subunit 9##BC010906|MED9|55090|mediator complex subunit 9##BC104988|MED9|55090|mediator complex subunit 9##BC112029|MED9|55090|mediator complex subunit 9	0.91851	CTCF.p2:9:0.919
chr6	97634418	97634545	reg1009198.p1	11.712	+	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	-261858	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-288717	-	TSC_hg19_v1_chr6_-_97345751 BC018802 AF161474	-288729	-	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	96609	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	1648099	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	1648191	+	NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC018802|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF161474|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2	0.053545	
chrX	40511027	40511150	reg1008262.p1	11.712	+	TSC_hg19_v1_chrX_-_40506814 AK095710 NM_144970	-4264	-	AK123989 TSC_hg19_v1_chrX_-_40506780 AL832829 CU692972 DQ892152 DQ895348 BC025334 AK304539 AK315384	-4356	-	NM_001195522	-28271	+	AF104256 AB590907 AF135802 TSC_hg19_v1_chrX_-_40594768 BC132672 BC132674 BC144231	83629	-	TSC_hg19_v1_chrX_-_40594795 AB006651 AF304448 BC098377 NM_004229	83700	-	TSC_hg19_v1_chrX_-_40594999 AK293070	83892	-	AK095710|CXorf38|159013|chromosome X open reading frame 38##NM_144970|CXorf38|159013|chromosome X open reading frame 38##AK123989|CXorf38|159013|chromosome X open reading frame 38##AL832829|CXorf38|159013|chromosome X open reading frame 38##DQ892152|CXorf38|159013|chromosome X open reading frame 38##DQ895348|CXorf38|159013|chromosome X open reading frame 38##BC025334|CXorf38|159013|chromosome X open reading frame 38##AK304539|CXorf38|159013|chromosome X open reading frame 38##AK315384|CXorf38|159013|chromosome X open reading frame 38##NM_001195522|LOC347411|347411|brain protein 44-like protein 2##AF104256|MED14|9282|mediator complex subunit 14##AF135802|MED14|9282|mediator complex subunit 14##BC132672|MED14|9282|mediator complex subunit 14##BC132674|MED14|9282|mediator complex subunit 14##BC144231|MED14|9282|mediator complex subunit 14##AB006651|MED14|9282|mediator complex subunit 14##AF304448|MED14|9282|mediator complex subunit 14##BC098377|MED14|9282|mediator complex subunit 14##NM_004229|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14	0.999426	CTCF.p2:-14:0.999
chr14	68085470	68085588	reg1006805.p1	11.711	+	BT006804 CU678574 BC071849 BC004100 L19783 AK314108 AK293584 NM_004569	-18562	-	AK307428 NM_020715 TSC_hg19_v1_chr14_+_68000028 AB033026 BC146787	-85556	+	NM_182526 TSC_hg19_v1_chr14_-_67982162 AK090706 AX746582	-103419	-	TSC_hg19_v1_chr14_+_68086582 BC029050 NM_001172	1060	+	AY074489 BC008464 TSC_hg19_v1_chr14_+_68086636	1107	+	U75667 AK312484 TSC_hg19_v1_chr14_+_68086666 D86724 BC001350 U82256 AB587380 CR536550	1145	+	BT006804|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC071849|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC004100|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##L19783|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##AK314108|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##NM_004569|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##AK307428|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##NM_020715|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##AB033026|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##BC146787|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##NM_182526|TMEM229B|161145|transmembrane protein 229B##AK090706|TMEM229B|161145|transmembrane protein 229B##BC029050|ARG2|384|arginase, type II##NM_001172|ARG2|384|arginase, type II##AY074489|ARG2|384|arginase, type II##BC008464|ARG2|384|arginase, type II##U75667|ARG2|384|arginase, type II##AK312484|ARG2|384|arginase, type II##D86724|ARG2|384|arginase, type II##BC001350|ARG2|384|arginase, type II##U82256|ARG2|384|arginase, type II##CR536550|ARG2|384|arginase, type II	0.855749	CTCF.p2:-6:0.856
chr1	246614189	246614305	reg1006275.p2	11.710	+	AK024733 NM_022743	-33536	-	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-1295939	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-1480564	+	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	56307	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	56361	-	TSC_hg19_v1_chr1_-_246670632 NM_001167740	56390	-	AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3##NM_001167740|SMYD3|64754|SET and MYND domain containing 3	0.876572	CTCF.p2:9:0.877
chr17	55825029	55825142	reg1008829.p1	11.709	+	AK093888 AX748353 NM_170721	-490712	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-491112	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-661942	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	102319	-	AK000746 NM_017949	155664	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	207591	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.44709	CTCF.p2:7:0.447
chr6	83924986	83925119	reg1006704.p2	11.709	+	AK301867 NM_001199917 TSC_hg19_v1_chr6_-_83903693	-21390	-	NM_033411 TSC_hg19_v1_chr6_+_83903075 AK309249 AK295724 AK302978 AK313083	-21955	+	AF102265 AB032081 AF180371 TSC_hg19_v1_chr6_-_83902977 AK314512 AK225363 AK001365 AK023432 BC001258 NM_001199918 NM_001199919 NM_015599	-22080	-	U43944 TSC_hg19_v1_chr6_-_84140724 X77244 DQ892155 EU176687 AB528430 L34035	215640	-	TSC_hg19_v1_chr6_-_84140744 BC025246	215696	-	TSC_hg19_v1_chr6_-_84140767 AK223417 AK301875 AK289783 AK302777	215739	-	AK301867|PGM3|5238|phosphoglucomutase 3##NM_001199917|PGM3|5238|phosphoglucomutase 3##NM_033411|RWDD2A|112611|RWD domain containing 2A##AK309249|RWDD2A|112611|RWD domain containing 2A##AK295724|RWDD2A|112611|RWD domain containing 2A##AK302978|RWDD2A|112611|RWD domain containing 2A##AK313083|RWDD2A|112611|RWD domain containing 2A##AF102265|PGM3|5238|phosphoglucomutase 3##AB032081|PGM3|5238|phosphoglucomutase 3##AF180371|PGM3|5238|phosphoglucomutase 3##AK314512|PGM3|5238|phosphoglucomutase 3##AK225363|PGM3|5238|phosphoglucomutase 3##AK001365|PGM3|5238|phosphoglucomutase 3##AK023432|PGM3|5238|phosphoglucomutase 3##BC001258|PGM3|5238|phosphoglucomutase 3##NM_001199918|PGM3|5238|phosphoglucomutase 3##NM_001199919|PGM3|5238|phosphoglucomutase 3##NM_015599|PGM3|5238|phosphoglucomutase 3##U43944|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##X77244|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##DQ892155|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##EU176687|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##L34035|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##BC025246|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK223417|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK301875|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK289783|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK302777|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	0.964555	CTCF.p2:3:0.965
chr9	135383168	135383279	reg1007008.p1	11.709	+	AK128819 NM_207417 BC118593 BC124555	-97611	+	TSC_hg19_v1_chr9_-_135282210 BC050734 X83973 BC143821 BC127669 BC127670 BC143048 BC143049 BC062692 BC104639 AK225119 AK302902 NM_001205296 NM_007344	-101022	-	TSC_hg19_v1_chr9_-_135230374 BX538166 NM_015046	-152816	-	TSC_hg19_v1_chr9_+_135457992 AK054797 NM_020064 BC136956 BC136969 BC144433 AF325688 AB463426 AF321618	74856	+	TSC_hg19_v1_chr9_-_135545374 AK225121 AK027002 AK225350 AK304715 BC012726	162157	-	TSC_hg19_v1_chr9_+_135545447 BC060821	162195	+	AK128819|C9orf171|389799|chromosome 9 open reading frame 171##NM_207417|C9orf171|389799|chromosome 9 open reading frame 171##BC118593|C9orf171|389799|chromosome 9 open reading frame 171##BC124555|C9orf171|389799|chromosome 9 open reading frame 171##BC050734|TTF1|7270|transcription termination factor, RNA polymerase I##BC143821|TTF1|7270|transcription termination factor, RNA polymerase I##BC127669|TTF1|7270|transcription termination factor, RNA polymerase I##BC127670|TTF1|7270|transcription termination factor, RNA polymerase I##BC143048|TTF1|7270|transcription termination factor, RNA polymerase I##BC143049|TTF1|7270|transcription termination factor, RNA polymerase I##BC062692|TTF1|7270|transcription termination factor, RNA polymerase I##BC104639|TTF1|7270|transcription termination factor, RNA polymerase I##AK225119|TTF1|7270|transcription termination factor, RNA polymerase I##AK302902|TTF1|7270|transcription termination factor, RNA polymerase I##NM_001205296|TTF1|7270|transcription termination factor, RNA polymerase I##NM_007344|TTF1|7270|transcription termination factor, RNA polymerase I##BX538166|SETX|23064|senataxin##NM_015046|SETX|23064|senataxin##AK054797|BARHL1|56751|BarH-like homeobox 1##NM_020064|BARHL1|56751|BarH-like homeobox 1##BC136956|BARHL1|56751|BarH-like homeobox 1##BC136969|BARHL1|56751|BarH-like homeobox 1##BC144433|BARHL1|56751|BarH-like homeobox 1##AF325688|BARHL1|56751|BarH-like homeobox 1##AF321618|BARHL1|56751|BarH-like homeobox 1##AK225121|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK027002|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK225350|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK304715|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC012726|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC060821|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa	0.648032	CTCF.p2:3:0.648
chr9	4762675	4762787	reg1007316.p1	11.709	+	AF183419 NM_001199853	-20689	-	NM_001199855	-20933	-	TSC_hg19_v1_chr9_-_4741309 NM_001199852 NM_016282	-21378	-	NM_005772 TSC_hg19_v1_chr9_+_4792833	30102	+	TSC_hg19_v1_chr9_+_4792936 AK022904 BC001025 AK225872	30192	+	TSC_hg19_v1_chr9_+_4792995 AJ276894 EU831474 EU831561 AF067172	30312	+	AF183419|AK3|50808|adenylate kinase 3##NM_001199853|AK3|50808|adenylate kinase 3##NM_001199855|AK3|50808|adenylate kinase 3##NM_001199852|AK3|50808|adenylate kinase 3##NM_016282|AK3|50808|adenylate kinase 3##NM_005772|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK022904|RCL1|10171|RNA terminal phosphate cyclase-like 1##BC001025|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK225872|RCL1|10171|RNA terminal phosphate cyclase-like 1##AJ276894|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831474|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831561|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF067172|RCL1|10171|RNA terminal phosphate cyclase-like 1	0.965046	CTCF.p2:-7:0.965
chr10	73078821	73078926	reg1007536.p1	11.708	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-106493	+	NM_000281	-430333	-	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	-430571	-	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	152	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	173	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	77865	+	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_000281|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23	0.894299	CTCF.p2:13:0.894
chr6	49499936	49500078	reg1009595.p1	11.707	+	AK126371 NM_001010904	-32337	+	AK293016 NM_018132 BC016279 TSC_hg19_v1_chr6_+_49431119	-68903	+	M65131 BC016282 TSC_hg19_v1_chr6_-_49430938 BX647789 AK312611 AK292568 NM_000255	-69062	-	NM_001145652	18105	+	AK289889 TSC_hg19_v1_chr6_+_49518380 BC036917 AK054918	18365	+	TSC_hg19_v1_chr6_+_49518472 CU691450	18492	+	NM_001010904|GLYATL3|389396|glycine-N-acyltransferase-like 3##AK293016|CENPQ|55166|centromere protein Q##NM_018132|CENPQ|55166|centromere protein Q##BC016279|CENPQ|55166|centromere protein Q##M65131|MUT|4594|methylmalonyl CoA mutase##BC016282|MUT|4594|methylmalonyl CoA mutase##BX647789|MUT|4594|methylmalonyl CoA mutase##AK312611|MUT|4594|methylmalonyl CoA mutase##AK292568|MUT|4594|methylmalonyl CoA mutase##NM_000255|MUT|4594|methylmalonyl CoA mutase##NM_001145652|C6orf141|135398|chromosome 6 open reading frame 141##AK289889|C6orf141|135398|chromosome 6 open reading frame 141##BC036917|C6orf141|135398|chromosome 6 open reading frame 141##AK054918|C6orf141|135398|chromosome 6 open reading frame 141	0.70089	CTCF.p2:24:0.633
chr2	103232416	103232557	reg1009413.p1	11.706	+	CR627411 NM_001011552	-142725	+	AK300026 AF077346 NM_003853	-197286	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	-253378	+	BC136377 BC136378 BC035787 NM_003048 AF073299	3697	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	120847	-	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	120896	+	CR627411|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##NM_001011552|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein##AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein##NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1##BC136377|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC136378|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC035787|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##NM_003048|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AF073299|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182	0.0	
chr8	123651224	123651351	reg1007213.p1	11.706	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-997661	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1826781	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1827017	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	142624	+	BC042145 TSC_hg19_v1_chr8_+_123794000	142707	+	TSC_hg19_v1_chr8_+_123794108 AB020661	142816	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.110325	
chr8	56941518	56941652	reg1009032.p1	11.706	+	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-149065	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	-149190	+	TSC_hg19_v1_chr8_+_56792383 M16038 NM_001111097 NM_002350 BC126456 BC126458	-149220	+	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	45501	-	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	84955	-	TSC_hg19_v1_chr8_-_57123833 U65002	182250	-	AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M16038|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_001111097|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_002350|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126456|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126458|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1	0.967093	CTCF.p2:0:0.967
chrX	114975407	114975556	reg1006652.p1	11.706	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-147613	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-178439	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-179875	+	BC003645 TSC_hg19_v1_chrX_-_115085443	109958	-	AK313927 NM_000686 X87723 U16957	326514	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	592286	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:23:0.429
chr1	200108903	200109035	reg1009859.p1	11.705	+	AK316513 TSC_hg19_v1_chr1_+_200011716	-97245	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	-112100	+	TSC_hg19_v1_chr1_-_198906559 EF413001	-1202422	-	NM_001105517	73686	+	AK021707 TSC_hg19_v1_chr1_-_200377270	268300	-	TSC_hg19_v1_chr1_-_200377488 AK022921	268569	-	AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene##AK021707|ZNF281|23528|zinc finger protein 281##AK022921|ZNF281|23528|zinc finger protein 281	0.861381	CTCF.p2:-3:0.861
chr19	40042204	40042306	reg1006464.p1	11.705	+	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	-11435	-	TSC_hg19_v1_chr19_-_40023460 BC040157 BC051333 AK096263 NM_152361 BC009725	-18768	-	AY324825 NM_182704 BC117331	-36486	+	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	50930	+	FJ613352 NM_001190441	104290	+	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	152788	+	AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC040157|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##BC051333|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##AK096263|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##NM_152361|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##BC009725|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##AY324825|SELV|348303|selenoprotein V##NM_182704|SELV|348303|selenoprotein V##BC117331|SELV|348303|selenoprotein V##BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14	0.998534	CTCF.p2:3:0.999
chr8	74217881	74218008	reg1009420.p1	11.705	+	TSC_hg19_v1_chr8_+_74207135 AF456765 BC067131 AY358270	-10675	+	TSC_hg19_v1_chr8_+_74206836 NM_172037	-11135	+	CR456773 L16558 AB529035 BC071671 BC071895 BC087837 BC071894 BC001476 BC006095 X57959 AB055763 AK225246 AK225254 AK291119 AK313365 X52967 BC009599 NM_000971	-12087	-	Y19062 TSC_hg19_v1_chr8_-_74659076 AB210014 AL079285 AK002152 AK126149 AK293496 AK303104 AK314617 BC008369 BC008370	441123	-	TSC_hg19_v1_chr8_-_74659103 AK294466 CR627442 NM_001164380 NM_001164381 NM_001164382 NM_001164383 NM_001164385 NM_014393	441214	-	TSC_hg19_v1_chr8_-_74659707 AK307841 AK293729	441752	-	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)##BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)##AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)##NM_172037|RDH10|157506|retinol dehydrogenase 10 (all-trans)##CR456773|RPL7|6129|ribosomal protein L7##L16558|RPL7|6129|ribosomal protein L7##BC071671|RPL7|6129|ribosomal protein L7##BC071895|RPL7|6129|ribosomal protein L7##BC087837|RPL7|6129|ribosomal protein L7##BC071894|RPL7|6129|ribosomal protein L7##BC006095|RPL7|6129|ribosomal protein L7##X57959|RPL7|6129|ribosomal protein L7##AK225246|RPL7|6129|ribosomal protein L7##AK225254|RPL7|6129|ribosomal protein L7##AK291119|RPL7|6129|ribosomal protein L7##AK313365|RPL7|6129|ribosomal protein L7##X52967|RPL7|6129|ribosomal protein L7##BC009599|RPL7|6129|ribosomal protein L7##NM_000971|RPL7|6129|ribosomal protein L7##Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK126149|LOC729696|729696|uncharacterized LOC729696##AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	0.184892	
chrX	17609397	17609518	reg1008765.p1	11.704	+	TSC_hg19_v1_chrX_+_17393877 GQ988776	-215577	+	TSC_hg19_v1_chrX_+_17393806 BC136415 BC171763	-215646	+	TSC_hg19_v1_chrX_+_17393541 AY436752 NM_198270	-215915	+	AY456992 NM_001136024	43955	+	TSC_hg19_v1_chrX_+_17755572 BC026159 NM_001037535 NM_001037536 NM_001037540 NM_006746 AK313993 BC009193 AF160728	146138	+	AK056214 AK298873 AK314631 NM_001172732 NM_001172739 NM_001172743 NM_021785	269948	-	GQ988776|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC136415|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC171763|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AY436752|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_198270|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC026159|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037535|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037536|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037540|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_006746|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AK313993|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##BC009193|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AF160728|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AK056214|RAI2|10742|retinoic acid induced 2##AK298873|RAI2|10742|retinoic acid induced 2##AK314631|RAI2|10742|retinoic acid induced 2##NM_001172732|RAI2|10742|retinoic acid induced 2##NM_001172739|RAI2|10742|retinoic acid induced 2##NM_001172743|RAI2|10742|retinoic acid induced 2##NM_021785|RAI2|10742|retinoic acid induced 2	0.266561	CTCF.p2:7:0.267
chr1	156414327	156414461	reg1010083.p1	11.702	+	NM_006365 U49857 BC059943 BC107686 BC050448 TSC_hg19_v1_chr1_-_156399219 AK095626 BC054045	-15118	-	AF193807 AK290840 AK294641 AK303799 AK303814 AY139092 AY139093 NM_020407 AK308556 TSC_hg19_v1_chr1_+_156339022 AK054780 BC065218	-75373	+	TSC_hg19_v1_chr1_-_156308103 NM_001008800 NM_005998	-106242	-	BC040949 TSC_hg19_v1_chr1_-_156460409	46009	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	56124	-	TSC_hg19_v1_chr1_-_156470563 BC018985 BC032479 AB210005 BC064988	56156	-	NM_006365|C1orf61|10485|chromosome 1 open reading frame 61##U49857|C1orf61|10485|chromosome 1 open reading frame 61##BC059943|C1orf61|10485|chromosome 1 open reading frame 61##BC107686|C1orf61|10485|chromosome 1 open reading frame 61##BC050448|C1orf61|10485|chromosome 1 open reading frame 61##AK095626|C1orf61|10485|chromosome 1 open reading frame 61##BC054045|C1orf61|10485|chromosome 1 open reading frame 61##AF193807|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK290840|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK294641|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303799|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303814|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139092|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139093|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_020407|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK308556|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK054780|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##BC065218|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_001008800|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_005998|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##BC040949|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D##BC018985|MEF2D|4209|myocyte enhancer factor 2D##BC032479|MEF2D|4209|myocyte enhancer factor 2D##AB210005|MEF2D|4209|myocyte enhancer factor 2D	0.990915	CTCF.p2:10:0.991
chr12	97702502	97702640	reg1008876.p1	11.702	+	BC027605 NM_001135175	-401328	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-401540	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-908254	-	TSC_hg19_v1_chr12_-_98897622 AK126817	1195056	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	1206796	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	1206836	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.947756	CTCF.p2:4:0.948
chr1	153377341	153377453	reg1006738.p2	11.701	+	Y00278 AK291328 X06234 NM_002964	-13794	-	X97859 BC070294 D83664 NM_005621	-29332	-	AK311882 NM_002965 X06233 TSC_hg19_v1_chr1_+_153330329 BC047681 AF086362	-47059	+	AY189118 NM_176823	11602	+	NM_001045479	35105	-	BC034687 M86757 NM_002963	55723	-	Y00278|S100A8|6279|S100 calcium binding protein A8##AK291328|S100A8|6279|S100 calcium binding protein A8##X06234|S100A8|6279|S100 calcium binding protein A8##NM_002964|S100A8|6279|S100 calcium binding protein A8##X97859|S100A12|6283|S100 calcium binding protein A12##BC070294|S100A12|6283|S100 calcium binding protein A12##D83664|S100A12|6283|S100 calcium binding protein A12##NM_005621|S100A12|6283|S100 calcium binding protein A12##AK311882|S100A9|6280|S100 calcium binding protein A9##NM_002965|S100A9|6280|S100 calcium binding protein A9##X06233|S100A9|6280|S100 calcium binding protein A9##BC047681|S100A9|6280|S100 calcium binding protein A9##AF086362|S100A9|6280|S100 calcium binding protein A9##AY189118|S100A7A|338324|S100 calcium binding protein A7A##NM_176823|S100A7A|338324|S100 calcium binding protein A7A##NM_001045479|S100A7L2|645922|S100 calcium binding protein A7-like 2##BC034687|S100A7|6278|S100 calcium binding protein A7##M86757|S100A7|6278|S100 calcium binding protein A7##NM_002963|S100A7|6278|S100 calcium binding protein A7	0.340473	CTCF.p2:8:0.340
chr13	114427893	114428024	reg1009967.p1	11.701	+	AK289912 NM_002929 U63973 BC140945 L77503	-106381	+	CU688596 DQ890817 DQ893973 M75110 BC029059 BC042846 AK310129 NM_000705	-115473	-	AK310401 TSC_hg19_v1_chr13_+_114239742	-188231	+	TSC_hg19_v1_chr13_+_114462179 BC018995 NM_182614 AK295653 EU831453 EU831540	34253	+	AL833761 TSC_hg19_v1_chr13_-_114526268	98259	-	AK092028 NM_001143946	108755	-	AK289912|GRK1|6011|G protein-coupled receptor kinase 1##NM_002929|GRK1|6011|G protein-coupled receptor kinase 1##U63973|GRK1|6011|G protein-coupled receptor kinase 1##BC140945|GRK1|6011|G protein-coupled receptor kinase 1##L77503|GRK1|6011|G protein-coupled receptor kinase 1##DQ890817|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##DQ893973|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##M75110|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##BC029059|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##BC042846|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##AK310129|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##NM_000705|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##AK310401|TFDP1|7027|transcription factor Dp-1##BC018995|FAM70B|348013|family with sequence similarity 70, member B##NM_182614|FAM70B|348013|family with sequence similarity 70, member B##AK295653|FAM70B|348013|family with sequence similarity 70, member B##EU831453|FAM70B|348013|family with sequence similarity 70, member B##EU831540|FAM70B|348013|family with sequence similarity 70, member B##AL833761|GAS6|2621|growth arrest-specific 6##AK092028|GAS6|2621|growth arrest-specific 6##NM_001143946|GAS6|2621|growth arrest-specific 6	0.912779	CTCF.p2:4:0.913
chr2	72998143	72998267	reg1008788.p1	11.701	+	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	-623263	-	AK295683 TSC_hg19_v1_chr2_-_72371202	-627006	-	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-1304312	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	54899	-	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	116325	+	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	146448	+	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1	0.973975	CTCF.p2:-14:0.974
chr9	72164454	72164575	reg1007239.p1	11.699	+	AK126127 NM_004816	-220274	+	NM_001127608	-225027	+	NM_001170415 AK302483 AK295034 NM_001170416	-344513	+	TSC_hg19_v1_chr9_-_72287241 AF029106 AF047347 NM_001163	122690	-	TSC_hg19_v1_chr9_-_72374870 AL832683 BC053622 NM_001099666	210382	-	NM_001010940 BC150564 BC136709 BC144373 BC144374 BC144375	271222	+	AK126127|FAM189A2|9413|family with sequence similarity 189, member A2##NM_004816|FAM189A2|9413|family with sequence similarity 189, member A2##NM_001127608|FAM189A2|9413|family with sequence similarity 189, member A2##NM_001170415|TJP2|9414|tight junction protein 2 (zona occludens 2)##AK302483|TJP2|9414|tight junction protein 2 (zona occludens 2)##AK295034|TJP2|9414|tight junction protein 2 (zona occludens 2)##NM_001170416|TJP2|9414|tight junction protein 2 (zona occludens 2)##AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##AL832683|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##BC053622|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##NM_001099666|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##NM_001010940|C9orf135|138255|chromosome 9 open reading frame 135##BC150564|C9orf135|138255|chromosome 9 open reading frame 135##BC136709|C9orf135|138255|chromosome 9 open reading frame 135##BC144373|C9orf135|138255|chromosome 9 open reading frame 135##BC144374|C9orf135|138255|chromosome 9 open reading frame 135##BC144375|C9orf135|138255|chromosome 9 open reading frame 135	0.293525	CTCF.p2:15:0.294
chr12	3182691	3182810	reg1008825.p1	11.698	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-113689	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-114156	+	TSC_hg19_v1_chr12_+_3000056 AK024246 NM_001160408 NM_003324 AK293285 AK307434 AF045583 BC032587 CU689434 AB464323 EU446713	-182697	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	3812	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	417691	+	AK125333 TSC_hg19_v1_chr12_-_3601984	419235	-	BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AK024246|TULP3|7289|tubby like protein 3##NM_001160408|TULP3|7289|tubby like protein 3##NM_003324|TULP3|7289|tubby like protein 3##AK293285|TULP3|7289|tubby like protein 3##AK307434|TULP3|7289|tubby like protein 3##AF045583|TULP3|7289|tubby like protein 3##BC032587|TULP3|7289|tubby like protein 3##EU446713|TULP3|7289|tubby like protein 3##NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223	0.959487	CTCF.p2:6:0.959
chr9	102586969	102587108	reg1007954.p2	11.698	+	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	-2881	+	TSC_hg19_v1_chr9_-_102582187 AK057451	-4873	-	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-602451	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	81889	+	AK311412 TSC_hg19_v1_chr9_+_102668952	81914	+	TSC_hg19_v1_chr9_+_102668954 BC111009 AK000658 BC070269 AK095262 AL833620	81963	+	D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17##AK311412|STX17|55014|syntaxin 17##BC111009|STX17|55014|syntaxin 17##AK000658|STX17|55014|syntaxin 17##BC070269|STX17|55014|syntaxin 17##AK095262|STX17|55014|syntaxin 17##AL833620|STX17|55014|syntaxin 17	0.0	
chr12	122956316	122956434	reg1007549.p2	11.694	+	X64838 TSC_hg19_v1_chr12_-_122907155 M97501 NM_001247997 NM_002956 NM_198240	-49138	-	AF045652 AF045653 AY563000 TSC_hg19_v1_chr12_-_122839059	-117338	-	TSC_hg19_v1_chr12_-_122751044 NM_022916	-205320	-	TSC_hg19_v1_chr12_-_122985404 BC065918	29052	-	TSC_hg19_v1_chr12_-_122985537 AK027702 AK074638 NM_017612	29143	-	TSC_hg19_v1_chr12_-_123011521 BC008684 AK056114 BX640711 AK056256 BC067773 AB212664 AK094465 NM_023012	55133	-	X64838|CLIP1|6249|CAP-GLY domain containing linker protein 1##M97501|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_001247997|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_002956|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_198240|CLIP1|6249|CAP-GLY domain containing linker protein 1##AF045652|CLIP1|6249|CAP-GLY domain containing linker protein 1##AF045653|CLIP1|6249|CAP-GLY domain containing linker protein 1##AY563000|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_022916|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##BC065918|ZCCHC8|55596|zinc finger, CCHC domain containing 8##AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8##AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8##NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8##BC008684|RSRC2|65117|arginine/serine-rich coiled-coil 2##AK056114|RSRC2|65117|arginine/serine-rich coiled-coil 2##BX640711|RSRC2|65117|arginine/serine-rich coiled-coil 2##AK056256|RSRC2|65117|arginine/serine-rich coiled-coil 2##BC067773|RSRC2|65117|arginine/serine-rich coiled-coil 2##AB212664|RSRC2|65117|arginine/serine-rich coiled-coil 2##AK094465|RSRC2|65117|arginine/serine-rich coiled-coil 2##NM_023012|RSRC2|65117|arginine/serine-rich coiled-coil 2	0.444607	CTCF.p2:-7:0.445
chr15	34256416	34256543	reg1008852.p1	11.694	+	TSC_hg19_v1_chr15_-_34212524 BC037796	-43921	-	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	-653310	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-896244	-	AK095198 NM_012125	4609	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	74833	-	BC012456 TSC_hg19_v1_chr15_-_34394064 AJ250344 NM_020154 AY358445	137562	-	AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor##BC012456|C15orf24|56851|chromosome 15 open reading frame 24##AJ250344|C15orf24|56851|chromosome 15 open reading frame 24##NM_020154|C15orf24|56851|chromosome 15 open reading frame 24##AY358445|C15orf24|56851|chromosome 15 open reading frame 24	0.349631	CTCF.p2:8:0.350
chr3	118536642	118536766	reg1006915.p1	11.694	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-2372331	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-2372373	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-3194285	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	216829	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	216979	-	AK097667 NM_152538 AK292387	328193	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.983468	CTCF.p2:20:0.983
chr10	18031950	18032061	reg1007150.p2	11.691	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	-180602	+	NM_001098844 BC157856	-237751	+	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	-345775	+	NM_001098844 BC157856	9216	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	66388	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	208824	+	BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	0.40393	CTCF.p2:0:0.404
chr2	96394777	96394916	reg1008064.p1	11.691	+	BC015353 NM_138800	-137081	+	NM_001164464	-244368	-	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	-326367	+	TSC_hg19_v1_chr2_-_96482383 BC117383 BC126153 AK057596	87599	-	TSC_hg19_v1_chr2_-_96657677 AK302433	262776	-	TSC_hg19_v1_chr2_+_96676311 BC015216	281478	+	BC015353|TRIM43|129868|tripartite motif containing 43##NM_138800|TRIM43|129868|tripartite motif containing 43##NM_001164464|TRIM43B|653192|tripartite motif containing 43B##AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##AK057596|LINC00342|150759|long intergenic non-protein coding RNA 342##AK302433|ANKRD36C|400986|ankyrin repeat domain 36C	0.854187	CTCF.p2:17:0.854
chr10	79807172	79807286	reg1006831.p1	11.689	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-13598	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-13673	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-17915	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	1021559	+	TSC_hg19_v1_chr10_+_80899458 AK025812	1092255	+	TSC_hg19_v1_chr10_+_81003207 AB033050	1195901	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.995685	CTCF.p2:-6:0.996
chr1	227669381	227669488	reg1006801.p1	11.689	+	TSC_hg19_v1_chr1_-_227506194 NM_003607 NM_014826 U59305	-163384	-	TSC_hg19_v1_chr1_+_227128004 AB073905	-541410	+	TSC_hg19_v1_chr1_+_227127998 AK074693 AK092784 AK126200 AK293571 AK297735 AX747728 AK090494 AK301012 AX746479	-541439	+	TSC_hg19_v1_chr1_+_227751254 NM_178549 AK026475 AK307248 BC042500	81804	+	AK311313 TSC_hg19_v1_chr1_+_227751265	81847	+	AK055266 AK093736 BC032775 TSC_hg19_v1_chr1_+_227916386	246883	+	NM_003607|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##NM_014826|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##U59305|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##AB073905|ADCK3|56997|aarF domain containing kinase 3##AK074693|ADCK3|56997|aarF domain containing kinase 3##AK092784|ADCK3|56997|aarF domain containing kinase 3##AK126200|ADCK3|56997|aarF domain containing kinase 3##AK293571|ADCK3|56997|aarF domain containing kinase 3##AK297735|ADCK3|56997|aarF domain containing kinase 3##AK090494|ADCK3|56997|aarF domain containing kinase 3##AK301012|ADCK3|56997|aarF domain containing kinase 3##NM_178549|ZNF678|339500|zinc finger protein 678##AK026475|ZNF678|339500|zinc finger protein 678##AK307248|ZNF678|339500|zinc finger protein 678##BC042500|ZNF678|339500|zinc finger protein 678##AK311313|ZNF678|339500|zinc finger protein 678##AK055266|LOC100130093|100130093|uncharacterized LOC100130093##AK093736|LOC100130093|100130093|uncharacterized LOC100130093	0.0	
chr2	119932150	119932260	reg1006466.p1	11.689	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	-15801	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	-232385	+	NM_001426	-326447	-	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	49180	+	TSC_hg19_v1_chr2_+_119981409 AF423424 AK001691 AY029585 AY214461 BX538047 AK291608 AF238864 AF262322 AY082673 BC095421 BC042150	49222	+	BC126395 BC126397 BC144012 BC144014 BC171737 NM_001017927 TSC_hg19_v1_chr2_-_120124372 BC047365 BC105805	192133	-	AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##NM_001426|EN1|2019|engrailed homeobox 1##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase##AF423424|STEAP3|55240|STEAP family member 3, metalloreductase##AK001691|STEAP3|55240|STEAP family member 3, metalloreductase##AY029585|STEAP3|55240|STEAP family member 3, metalloreductase##AY214461|STEAP3|55240|STEAP family member 3, metalloreductase##BX538047|STEAP3|55240|STEAP family member 3, metalloreductase##AK291608|STEAP3|55240|STEAP family member 3, metalloreductase##AF238864|STEAP3|55240|STEAP family member 3, metalloreductase##AF262322|STEAP3|55240|STEAP family member 3, metalloreductase##AY082673|STEAP3|55240|STEAP family member 3, metalloreductase##BC095421|STEAP3|55240|STEAP family member 3, metalloreductase##BC042150|STEAP3|55240|STEAP family member 3, metalloreductase##BC126395|C2orf76|130355|chromosome 2 open reading frame 76##BC126397|C2orf76|130355|chromosome 2 open reading frame 76##BC144012|C2orf76|130355|chromosome 2 open reading frame 76##BC144014|C2orf76|130355|chromosome 2 open reading frame 76##BC171737|C2orf76|130355|chromosome 2 open reading frame 76##NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76##BC047365|C2orf76|130355|chromosome 2 open reading frame 76##BC105805|C2orf76|130355|chromosome 2 open reading frame 76	0.987984	CTCF.p2:14:0.988
chr6	36986059	36986187	reg1006102.p1	11.689	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-12622	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-31853	-	AK022783 TSC_hg19_v1_chr6_-_36953950 AF176006 AF192559 BC125055 BC153873 NM_014341 BC110914	-32146	-	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	151999	+	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	239263	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	239476	+	BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##AK022783|MTCH1|23787|mitochondrial carrier 1##AF176006|MTCH1|23787|mitochondrial carrier 1##AF192559|MTCH1|23787|mitochondrial carrier 1##BC125055|MTCH1|23787|mitochondrial carrier 1##BC153873|MTCH1|23787|mitochondrial carrier 1##NM_014341|MTCH1|23787|mitochondrial carrier 1##BC110914|MTCH1|23787|mitochondrial carrier 1##NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B	0.790501	CTCF.p2:2:0.791
chrX	114984365	114984520	reg1006821.p1	11.689	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-156574	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-187400	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-188836	+	BC003645 TSC_hg19_v1_chrX_-_115085443	100997	-	AK313927 NM_000686 X87723 U16957	317553	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	583325	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:21:0.429
chr10	101733086	101733217	reg1009457.p1	11.688	+	BC020878 TSC_hg19_v1_chr10_-_101690657 AK128576	-42448	-	TSC_hg19_v1_chr10_+_101542570 X96395 BC136419 U63970	-190588	+	TSC_hg19_v1_chr10_+_101542477 NM_000392 U49248 U66683	-190656	+	TSC_hg19_v1_chr10_-_101769671 AL833283 NM_015221	36510	-	X14329 BC027897 NM_001308 AK313972	108474	-	TSC_hg19_v1_chr10_-_101945727 NM_006459 AK222480 AK298427 AK315580	212585	-	AK128576|DNMBP|23268|dynamin binding protein##X96395|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##BC136419|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U63970|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##NM_000392|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U49248|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U66683|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##AL833283|DNMBP|23268|dynamin binding protein##NM_015221|DNMBP|23268|dynamin binding protein##X14329|CPN1|1369|carboxypeptidase N, polypeptide 1##BC027897|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_001308|CPN1|1369|carboxypeptidase N, polypeptide 1##AK313972|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_006459|ERLIN1|10613|ER lipid raft associated 1##AK222480|ERLIN1|10613|ER lipid raft associated 1##AK298427|ERLIN1|10613|ER lipid raft associated 1##AK315580|ERLIN1|10613|ER lipid raft associated 1	0.977083	CTCF.p2:-9:0.977
chr12	57977203	57977338	reg1008595.p1	11.687	+	BC146670 BC150208 TSC_hg19_v1_chr12_+_57943844 NM_004984 U06698 AB210045 AB384390	-33323	+	TSC_hg19_v1_chr12_+_57943826 AK294881 AK315202	-33450	+	AB290174 BC140009 TSC_hg19_v1_chr12_+_57943796	-33480	+	TSC_hg19_v1_chr12_+_57984991 NM_001146258 NM_001146259 NM_001146260 NM_024779 AK297243 AK075553	7682	+	TSC_hg19_v1_chr12_+_57985004 AX754970 AK302254 AK125526 BC028596 AK315588 AX754972 DQ894682 EU176290	7763	+	TSC_hg19_v1_chr12_+_57998614 AK092085 AX747349 NM_178502 AK128752 AK094385	21339	+	BC146670|KIF5A|3798|kinesin family member 5A##BC150208|KIF5A|3798|kinesin family member 5A##NM_004984|KIF5A|3798|kinesin family member 5A##U06698|KIF5A|3798|kinesin family member 5A##AB210045|KIF5A|3798|kinesin family member 5A##AK294881|KIF5A|3798|kinesin family member 5A##AK315202|KIF5A|3798|kinesin family member 5A##AB290174|KIF5A|3798|kinesin family member 5A##BC140009|KIF5A|3798|kinesin family member 5A##NM_001146258|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##NM_001146259|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##NM_001146260|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##NM_024779|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##AK297243|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##AK075553|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##AX754970|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##AK302254|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##AK125526|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##BC028596|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##AK315588|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##DQ894682|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##EU176290|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##AK092085|DTX3|196403|deltex homolog 3 (Drosophila)##NM_178502|DTX3|196403|deltex homolog 3 (Drosophila)##AK128752|DTX3|196403|deltex homolog 3 (Drosophila)##AK094385|DTX3|196403|deltex homolog 3 (Drosophila)	0.992458	CTCF.p2:-12:0.992
chr2	74942272	74942389	reg1007569.p1	11.687	+	TSC_hg19_v1_chr2_+_74881437 AK095587 AK312728 AL136552 NM_004263 AK075384 AK304358 AK291023 BC018361 BC038411 AK308166 AB021292 AB022317 AB463247 AM393735 CU676238 CU691566 DQ895677	-60902	+	BC025997 NM_138804	-67167	-	AK222883 TSC_hg19_v1_chr2_+_74781875 BC111055 U70987 BC114440 AK127127 AK127656 AK314678 BC114497 AK296154 AB587402 AF180527 AK300097	-160467	+	AF086198 NM_000189	117451	+	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	118930	+	TSC_hg19_v1_chr2_-_75062285 BC013295	119921	-	AK312728|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AL136552|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##NM_004263|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK075384|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK304358|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK291023|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC018361|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC038411|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK308166|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AB021292|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AB022317|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AM393735|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##DQ895677|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC025997|C2orf65|130951|chromosome 2 open reading frame 65##NM_138804|C2orf65|130951|chromosome 2 open reading frame 65##AK222883|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC111055|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##U70987|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC114440|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK127127|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK127656|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK314678|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC114497|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK296154|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF180527|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK300097|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF086198|HK2|3099|hexokinase 2##NM_000189|HK2|3099|hexokinase 2##AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2	0.997395	CTCF.p2:-15:0.997
chr9	42276217	42276350	reg1010225.p1	11.687	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-321369	-	BC040528 NM_001113541 NM_015667	-775605	+	BC040528 NM_001113541 NM_015667 NM_001242613	-948904	-	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	92075	+	NM_001099279 NM_199244	440950	+	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	857204	-	BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2	0.978389	CTCF.p2:-11:0.978
chr8	129871535	129871663	reg1009005.p1	11.686	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1064816	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1123109	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1123274	+	AB042405 NM_031415	927534	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1080316	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1080407	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.999375	CTCF.p2:8:0.999
chr11	113767148	113767276	reg1007247.p2	11.685	+	TSC_hg19_v1_chr11_-_113746251 CU688104 AF266283 BC065928 AK304376 NM_020886 AK304770 AK097623	-20921	-	TSC_hg19_v1_chr11_+_113659972 AK093353 AX748073	-107264	+	NM_001101389	-116695	+	AK314268 NM_006028 AF169255 AF080582 AB463385	8374	+	AK304630 NM_000869 NM_213621 D49394 AK313896 BC004453 BC002354 AJ003078 AJ003079 AJ003080 BT007204 AB587356 AF498984 CU677922 DQ892003 DQ895193	78709	+	AK299973 NM_001161772	81009	+	AF266283|USP28|57646|ubiquitin specific peptidase 28##BC065928|USP28|57646|ubiquitin specific peptidase 28##AK304376|USP28|57646|ubiquitin specific peptidase 28##NM_020886|USP28|57646|ubiquitin specific peptidase 28##AK304770|USP28|57646|ubiquitin specific peptidase 28##AK097623|USP28|57646|ubiquitin specific peptidase 28##AK093353|LOC390251|390251|SH3-domain GRB2-like 1 pseudogene##NM_001101389|CLDN25|644672|claudin 25##AK314268|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##NM_006028|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##AF169255|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##AF080582|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##AK304630|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##NM_000869|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##NM_213621|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##D49394|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AK313896|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##BC004453|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##BC002354|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AJ003078|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AJ003079|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AJ003080|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##BT007204|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AF498984|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##DQ892003|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##DQ895193|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AK299973|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##NM_001161772|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A	0.955198	CTCF.p2:-1:0.955
chr17	44331294	44331413	reg1007366.p1	11.685	+	AK291259 NM_001193465	-28626	-	TSC_hg19_v1_chr17_-_44270338 BC098376 NM_015443	-61044	-	TSC_hg19_v1_chr17_-_44270149 BX538006 NM_001193466	-61199	-	BC040501 CR749232 NM_014834	41143	+	BC020869 AK289590 AK315857 BC041803 BC030570 BX647266 NM_001039083 NM_001103154 NM_001113738 NM_016632	107769	-	BC040501 CR749232 NM_001006607	258722	+	AK291259|KIAA1267|284058|KIAA1267##NM_001193465|KIAA1267|284058|KIAA1267##BC098376|KIAA1267|284058|KIAA1267##NM_015443|KIAA1267|284058|KIAA1267##BX538006|KIAA1267|284058|KIAA1267##NM_001193466|KIAA1267|284058|KIAA1267##BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_014834|LRRC37A|9884|leucine rich repeat containing 37A##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AK289590|ARL17A|51326|ADP-ribosylation factor-like 17A##AK315857|ARL17A|51326|ADP-ribosylation factor-like 17A##BC041803|ARL17A|51326|ADP-ribosylation factor-like 17A##BC030570|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001039083|ARL17B|100506084|ADP-ribosylation factor-like 17B##NM_001103154|ARL17B|100506084|ADP-ribosylation factor-like 17B##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A##BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_001006607|LRRC37A2|474170|leucine rich repeat containing 37, member A2	0.999815	CTCF.p2:18:1.000
chr18	42259007	42259118	reg1007964.p1	11.685	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1401633	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-1563493	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-2723829	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	1052	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	1806	+	NM_001242692 AK292422	533890	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.0	
chr2	97220205	97220356	reg1007131.p2	11.685	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	-17795	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-218744	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-218804	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	83739	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	83787	-	TSC_hg19_v1_chr2_-_97304084 AK023813 AY050169 AK304011 NM_001115016 NM_017991	83818	-	NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK023813|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AY050169|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK304011|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##NM_001115016|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##NM_017991|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.998771	CTCF.p2:7:0.999
chr3	117716426	117716539	reg1008299.p1	11.685	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-1552109	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-1552151	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-2374063	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	1037051	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	1037201	-	AK097667 NM_152538 AK292387	1148415	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.962759	CTCF.p2:12:0.963
chr2	87766387	87766511	reg1009073.p1	11.684	+	TSC_hg19_v1_chr2_+_87755060 AK312010	-11389	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	-11432	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	-463117	-	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	281170	+	AK302429 NM_001078170	358836	-	CR749330 NM_001024457	518859	-	AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1##AK302429|RGPD2|729857|RANBP2-like and GRIP domain containing 2##NM_001078170|RGPD2|729857|RANBP2-like and GRIP domain containing 2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1	0.0	
chr9	33852346	33852472	reg1008565.p1	11.684	+	TSC_hg19_v1_chr9_+_33817704 AJ240087 CR457233	-34737	+	TSC_hg19_v1_chr9_+_33817325 BC047584 AK000426 BC004862 AK225880	-35015	+	TSC_hg19_v1_chr9_+_33817170 NM_017811	-35225	+	AB209911 TSC_hg19_v1_chr9_-_34048886 AK302754 AK294952 AK299183 AK303493 CR933678	196468	-	TSC_hg19_v1_chr9_-_34048895 BC111409 AK302335 NM_018449	196507	-	AK000354 AK292935 TSC_hg19_v1_chr9_-_34126623	274177	-	AJ240087|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##CR457233|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC047584|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK000426|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC004862|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK225880|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AB209911|UBAP2|55833|ubiquitin associated protein 2##AK302754|UBAP2|55833|ubiquitin associated protein 2##AK294952|UBAP2|55833|ubiquitin associated protein 2##AK299183|UBAP2|55833|ubiquitin associated protein 2##AK303493|UBAP2|55833|ubiquitin associated protein 2##CR933678|UBAP2|55833|ubiquitin associated protein 2##BC111409|UBAP2|55833|ubiquitin associated protein 2##AK302335|UBAP2|55833|ubiquitin associated protein 2##NM_018449|UBAP2|55833|ubiquitin associated protein 2##AK000354|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK292935|DCAF12|25853|DDB1 and CUL4 associated factor 12	0.996841	CTCF.p2:7:0.997
chr10	29785429	29785561	reg1007945.p1	11.683	+	BX648589 TSC_hg19_v1_chr10_-_29754623	-30944	-	BC031656 TSC_hg19_v1_chr10_+_29698527 BC063483 AL832706	-86978	+	TSC_hg19_v1_chr10_+_29698496 BC073888	-86997	+	TSC_hg19_v1_chr10_-_29923841 BC057241 BC070247	138366	-	AF109135 NM_021738 TSC_hg19_v1_chr10_-_29923901	138412	-	TSC_hg19_v1_chr10_-_30024866 AF051850 NM_003174	239269	-	BX648589|SVIL|6840|supervillin##BC031656|LOC387647|387647|patched domain containing 3 pseudogene##BC063483|LOC387647|387647|patched domain containing 3 pseudogene##AL832706|LOC387647|387647|patched domain containing 3 pseudogene##BC073888|LOC387647|387647|patched domain containing 3 pseudogene##AF109135|SVIL|6840|supervillin##NM_021738|SVIL|6840|supervillin##AF051850|SVIL|6840|supervillin##NM_003174|SVIL|6840|supervillin	0.996054	CTCF.p2:0:0.996
chr18	831038	831144	reg1006149.p1	11.683	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-18788	-	TSC_hg19_v1_chr18_-_712601 NM_202758 X67098 X89602 AK127818 BX648215 AK295850 AK292780 AK309035 BC001285 NM_001126123 NM_017512	-118509	-	AB464497 AK289986 BC028301 NM_001012716	-172799	-	AK313050 NM_001099733	73852	+	NM_001117 BC093837 BC101803 S83513	74250	+	AK290001 BC111020 NM_022840	1740364	-	AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_202758|ENOSF1|55556|enolase superfamily member 1##X67098|ENOSF1|55556|enolase superfamily member 1##X89602|ENOSF1|55556|enolase superfamily member 1##AK127818|ENOSF1|55556|enolase superfamily member 1##BX648215|ENOSF1|55556|enolase superfamily member 1##AK295850|ENOSF1|55556|enolase superfamily member 1##AK292780|ENOSF1|55556|enolase superfamily member 1##AK309035|ENOSF1|55556|enolase superfamily member 1##BC001285|ENOSF1|55556|enolase superfamily member 1##NM_001126123|ENOSF1|55556|enolase superfamily member 1##NM_017512|ENOSF1|55556|enolase superfamily member 1##AK289986|C18orf56|494514|chromosome 18 open reading frame 56##BC028301|C18orf56|494514|chromosome 18 open reading frame 56##NM_001012716|C18orf56|494514|chromosome 18 open reading frame 56##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4	0.977686	CTCF.p2:32:0.978
chr20	55549574	55549683	reg1013001.p2	11.683	+	TSC_hg19_v1_chr20_+_55204361 BC051829 NM_003222 AK314272 BC035664 U85658 X95693	-345198	+	BC014951 NM_001013646	-441345	+	AK131203 NM_080615	-448648	-	EU679366 AK094784 CU678997 DQ891494 DQ894685 EU176612 AB528364 CU678634 BC008584 M60316 AK312419 AK291186 TSC_hg19_v1_chr20_-_55841286 X51801	291567	-	TSC_hg19_v1_chr20_-_55841684 BC004248 NM_001719	292060	-	AF169385 NM_012444 NM_198265 BC033591 AF149310	355224	+	BC051829|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##NM_003222|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##AK314272|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##BC035664|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##U85658|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##X95693|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##BC014951|FAM209B|388799|family with sequence similarity 209, member B##NM_001013646|FAM209B|388799|family with sequence similarity 209, member B##AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##EU679366|BMP7|655|bone morphogenetic protein 7##AK094784|BMP7|655|bone morphogenetic protein 7##DQ891494|BMP7|655|bone morphogenetic protein 7##DQ894685|BMP7|655|bone morphogenetic protein 7##EU176612|BMP7|655|bone morphogenetic protein 7##BC008584|BMP7|655|bone morphogenetic protein 7##M60316|BMP7|655|bone morphogenetic protein 7##AK312419|BMP7|655|bone morphogenetic protein 7##AK291186|BMP7|655|bone morphogenetic protein 7##X51801|BMP7|655|bone morphogenetic protein 7##BC004248|BMP7|655|bone morphogenetic protein 7##NM_001719|BMP7|655|bone morphogenetic protein 7##AF169385|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_012444|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_198265|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##BC033591|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##AF149310|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	0.994247	CTCF.p2:5:0.994
chr4	71467291	71467403	reg1006847.p1	11.683	+	NM_016519 AF209780 AF263464 AJ537437 AF219994 AK314918 BC106931 BC106932	-9341	+	AB593161 AY358528 NM_212557 BC121812 BC121817	-83044	+	NM_152291 AK093828 AK312855 BX647190 BC025688 L13283	-129462	+	AF125373 NM_031889	27113	+	AB527699 DQ884395 TSC_hg19_v1_chr4_-_71532226 AK312014 BC038982	64887	-	TSC_hg19_v1_chr4_-_71532347 NM_144646	64999	-	NM_016519|AMBN|258|ameloblastin (enamel matrix protein)##AF209780|AMBN|258|ameloblastin (enamel matrix protein)##AF263464|AMBN|258|ameloblastin (enamel matrix protein)##AJ537437|AMBN|258|ameloblastin (enamel matrix protein)##AF219994|AMBN|258|ameloblastin (enamel matrix protein)##AK314918|AMBN|258|ameloblastin (enamel matrix protein)##BC106931|AMBN|258|ameloblastin (enamel matrix protein)##BC106932|AMBN|258|ameloblastin (enamel matrix protein)##AB593161|AMTN|401138|amelotin##AY358528|AMTN|401138|amelotin##NM_212557|AMTN|401138|amelotin##BC121812|AMTN|401138|amelotin##BC121817|AMTN|401138|amelotin##NM_152291|MUC7|4589|mucin 7, secreted##AK093828|MUC7|4589|mucin 7, secreted##AK312855|MUC7|4589|mucin 7, secreted##BX647190|MUC7|4589|mucin 7, secreted##BC025688|MUC7|4589|mucin 7, secreted##L13283|MUC7|4589|mucin 7, secreted##AF125373|ENAM|10117|enamelin##NM_031889|ENAM|10117|enamelin##DQ884395|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##AK312014|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##BC038982|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##NM_144646|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides	0.945106	CTCF.p2:-8:0.945
chr6	34360572	34360730	reg1009221.p1	11.683	+	TSC_hg19_v1_chr6_-_34360442 NM_006703	-200	-	TSC_hg19_v1_chr6_-_34360425 BC007727	-231	-	TSC_hg19_v1_chr6_-_34360360 AK313440	-316	-	TSC_hg19_v1_chr6_-_34393847 NM_001203245 U14972 BC070235 BC001032 BC071946 AK311797 NM_001014 NM_001202470 NM_001204091	33198	-	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	73253	+	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	122003	+	NM_006703|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##BC007727|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AK313440|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##NM_001203245|RPS10|6204|ribosomal protein S10##U14972|RPS10|6204|ribosomal protein S10##BC070235|RPS10|6204|ribosomal protein S10##BC001032|RPS10|6204|ribosomal protein S10##BC071946|RPS10|6204|ribosomal protein S10##AK311797|RPS10|6204|ribosomal protein S10##NM_001014|RPS10|6204|ribosomal protein S10##NM_001202470|RPS10-NUDT3|100529239|RPS10-NUDT3 readthrough##NM_001204091|RPS10|6204|ribosomal protein S10##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1	0.0	
chr8	146223108	146223243	reg1008553.p1	11.683	+	AK128723 TSC_hg19_v1_chr8_-_146202735	-20443	-	TSC_hg19_v1_chr8_-_146176267 BC010996 AK226016 AK096815 AK127625 DQ117529 NM_001029976 NM_006958	-46928	-	TSC_hg19_v1_chr8_-_146126839 AK294282 BX648173 AK095705 AB208810 BC017091 AK054888 NM_001109689 NM_021061 BC107579	-96356	-	TSC_hg19_v1_chr8_-_146228237 AK021796 AK294723	5055	-	BC065734 TSC_hg19_v1_chr8_-_146228282 AK296398	5097	-	TSC_hg19_v1_chr8_+_146277823 NM_023080 AK024642	54632	+	AK128723|ZNF252|286101|zinc finger protein 252##BC010996|ZNF16|7564|zinc finger protein 16##AK226016|ZNF16|7564|zinc finger protein 16##AK096815|ZNF16|7564|zinc finger protein 16##AK127625|ZNF16|7564|zinc finger protein 16##DQ117529|ZNF16|7564|zinc finger protein 16##NM_001029976|ZNF16|7564|zinc finger protein 16##NM_006958|ZNF16|7564|zinc finger protein 16##AK294282|ZNF250|58500|zinc finger protein 250##BX648173|ZNF250|58500|zinc finger protein 250##AK095705|ZNF250|58500|zinc finger protein 250##AB208810|ZNF250|58500|zinc finger protein 250##BC017091|ZNF250|58500|zinc finger protein 250##AK054888|ZNF250|58500|zinc finger protein 250##NM_001109689|ZNF250|58500|zinc finger protein 250##NM_021061|ZNF250|58500|zinc finger protein 250##BC107579|ZNF250|58500|zinc finger protein 250##AK294723|ZNF252|286101|zinc finger protein 252##BC065734|ZNF252|286101|zinc finger protein 252##AK296398|ZNF252|286101|zinc finger protein 252##NM_023080|C8orf33|65265|chromosome 8 open reading frame 33##AK024642|C8orf33|65265|chromosome 8 open reading frame 33	0.949194	CTCF.p2:17:0.949
chr4	122173497	122173621	reg1009480.p1	11.682	+	AK303192 NM_001244764	-24939	-	AK301058 NM_001128843	-35778	-	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	-88075	-	TSC_hg19_v1_chr4_-_122302115 NM_198179 AK309337	128603	-	BC012804 BC012822 TSC_hg19_v1_chr4_-_122618109 BC004993 X12454 D00172 M21731	444553	-	TSC_hg19_v1_chr4_-_122618136 AK297909 M19384 BC018671 BC032093	444574	-	AK303192|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3##AK301058|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3##AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3##NM_198179|QRFPR|84109|pyroglutamylated RFamide peptide receptor##AK309337|QRFPR|84109|pyroglutamylated RFamide peptide receptor##BC012804|ANXA5|308|annexin A5##BC012822|ANXA5|308|annexin A5##BC004993|ANXA5|308|annexin A5##X12454|ANXA5|308|annexin A5##D00172|ANXA5|308|annexin A5##M21731|ANXA5|308|annexin A5##AK297909|ANXA5|308|annexin A5##M19384|ANXA5|308|annexin A5##BC018671|ANXA5|308|annexin A5##BC032093|ANXA5|308|annexin A5	0.999891	CTCF.p2:8:0.981
chr14	90234221	90234379	reg1007532.p1	11.680	+	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	-148705	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	-350890	-	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-355524	-	BC001787 BX247991 AK298930 AK094740 NM_145231	186760	-	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	187946	+	TSC_hg19_v1_chr14_+_90422278 AK001952 BC015474 AK315549 BX161451	187979	+	AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK001952|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC015474|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK315549|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BX161451|TDP1|55775|tyrosyl-DNA phosphodiesterase 1	0.897182	CTCF.p2:9:0.897
chr20	15634898	15635013	reg1006030.p1	11.680	+	BC018687 NM_001033087	-457452	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-1316699	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-1658619	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	919058	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	1075708	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	1094066	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	0.289397	CTCF.p2:19:0.289
chr7	128114439	128114560	reg1008271.p1	11.680	+	TSC_hg19_v1_chr7_+_128095931 NM_001098786 NM_013332 AF144755 AK024729 AK222583 BC008573 BC001863 BC093742 BC112183	-18533	+	TSC_hg19_v1_chr7_-_128050037 AK092452 BC033622 AK054667 AK122994 NM_000883 NM_001102605 NM_001142576 NM_183243	-64462	-	AK131294 TSC_hg19_v1_chr7_-_128049984 CR933672	-64519	-	NM_018396 TSC_hg19_v1_chr7_+_128116813 AK302775 BC107586 AK002212 BC064929 BC121115 BC121116 AK299960	2338	+	BC066973 NM_001012454 NM_001128926 BC105729 BC105730 BC105731 BC047310	197847	+	TSC_hg19_v1_chr7_+_128349114 AK093161 AK302221 AX747964 BC040906 AK310426	234628	+	NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated##AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK092452|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC033622|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054667|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK122994|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_000883|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001102605|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142576|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_183243|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK131294|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##CR933672|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_018396|METTL2B|55798|methyltransferase like 2B##AK302775|METTL2B|55798|methyltransferase like 2B##BC107586|METTL2B|55798|methyltransferase like 2B##AK002212|METTL2B|55798|methyltransferase like 2B##BC064929|METTL2B|55798|methyltransferase like 2B##BC121115|METTL2B|55798|methyltransferase like 2B##BC121116|METTL2B|55798|methyltransferase like 2B##AK299960|METTL2B|55798|methyltransferase like 2B##BC066973|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001012454|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001128926|FAM71F2|346653|family with sequence similarity 71, member F2##BC105729|FAM71F2|346653|family with sequence similarity 71, member F2##BC105730|FAM71F2|346653|family with sequence similarity 71, member F2##BC105731|FAM71F2|346653|family with sequence similarity 71, member F2##BC047310|FAM71F2|346653|family with sequence similarity 71, member F2##AK093161|FAM71F1|84691|family with sequence similarity 71, member F1##AK302221|FAM71F1|84691|family with sequence similarity 71, member F1##BC040906|FAM71F1|84691|family with sequence similarity 71, member F1##AK310426|FAM71F1|84691|family with sequence similarity 71, member F1	0.098446	
chr12	123278335	123278469	reg1009761.p1	11.678	+	NM_201435 TSC_hg19_v1_chr12_+_123259079 BC060796 AY254201 AK097663 AK292466	-19301	+	TSC_hg19_v1_chr12_+_123237367 AF038554 AK299463 NM_003677 AB014731 BC007860 BC000925	-41011	+	BC095506 AY507143 EU809458 GQ129267 GQ129268 AK313955 BC066881 BC066882 BC066883 BC067484 AF345568 AF385431 AF385432 NM_032554	-63397	-	TSC_hg19_v1_chr12_+_123319294 AK090537	40900	+	TSC_hg19_v1_chr12_+_123320050 AK298387 BC067085 NM_003959 AB014555	41651	+	CU675175 TSC_hg19_v1_chr12_-_123380621	102213	-	NM_201435|CCDC62|84660|coiled-coil domain containing 62##BC060796|CCDC62|84660|coiled-coil domain containing 62##AY254201|CCDC62|84660|coiled-coil domain containing 62##AK097663|CCDC62|84660|coiled-coil domain containing 62##AK292466|CCDC62|84660|coiled-coil domain containing 62##AF038554|DENR|8562|density-regulated protein##AK299463|DENR|8562|density-regulated protein##NM_003677|DENR|8562|density-regulated protein##AB014731|DENR|8562|density-regulated protein##BC007860|DENR|8562|density-regulated protein##BC000925|DENR|8562|density-regulated protein##BC095506|HCAR1|27198|hydroxycarboxylic acid receptor 1##AY507143|HCAR1|27198|hydroxycarboxylic acid receptor 1##EU809458|HCAR1|27198|hydroxycarboxylic acid receptor 1##GQ129267|HCAR1|27198|hydroxycarboxylic acid receptor 1##GQ129268|HCAR1|27198|hydroxycarboxylic acid receptor 1##AK313955|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066881|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066882|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066883|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC067484|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF345568|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF385431|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF385432|HCAR1|27198|hydroxycarboxylic acid receptor 1##NM_032554|HCAR1|27198|hydroxycarboxylic acid receptor 1##AK090537|HIP1R|9026|huntingtin interacting protein 1 related##AK298387|HIP1R|9026|huntingtin interacting protein 1 related##BC067085|HIP1R|9026|huntingtin interacting protein 1 related##NM_003959|HIP1R|9026|huntingtin interacting protein 1 related##AB014555|HIP1R|9026|huntingtin interacting protein 1 related	0.99218	CTCF.p2:-15:0.992
chr1	152162433	152162565	reg1009302.p1	11.677	+	CR933683 TSC_hg19_v1_chr1_+_152161805	-704	+	AY396742 NM_001122965	-30796	-	NM_007113	-75944	-	AB180729 NM_001009931 AY396741	34170	-	L01090 NM_002016	135179	-	AY827490 NM_001014342	169982	-	AY396742|RPTN|126638|repetin##NM_001122965|RPTN|126638|repetin##NM_007113|TCHH|7062|trichohyalin##AB180729|HRNR|388697|hornerin##NM_001009931|HRNR|388697|hornerin##AY396741|HRNR|388697|hornerin##L01090|FLG|2312|filaggrin##NM_002016|FLG|2312|filaggrin##AY827490|FLG2|388698|filaggrin family member 2##NM_001014342|FLG2|388698|filaggrin family member 2	0.980956	CTCF.p2:-8:0.981
chr2	200844893	200845046	reg1009966.p1	11.677	+	TSC_hg19_v1_chr2_+_200820507 BC017959 CU676122	-24453	+	BX647677 NM_001039693	-24511	-	TSC_hg19_v1_chr2_-_200820204 HQ258367 AK298977 BC025758 AK095272 BC132835 BC136837 BC144420 BX648265 AK293064	-24757	-	NM_015535 AK290496	325640	+	AL110124 AY450394 AK090867 TSC_hg19_v1_chr2_+_201171276 NM_001100422 NM_001100424 AK002064 AK090703 AK314561 BC010848 BC018736 NM_001100423	326130	+	TSC_hg19_v1_chr2_+_201171424 AF193059 BC065817	326480	+	BC017959|C2orf47|79568|chromosome 2 open reading frame 47##BX647677|TYW5|129450|tRNA-yW synthesizing protein 5##NM_001039693|TYW5|129450|tRNA-yW synthesizing protein 5##HQ258367|TYW5|129450|tRNA-yW synthesizing protein 5##AK298977|TYW5|129450|tRNA-yW synthesizing protein 5##BC025758|TYW5|129450|tRNA-yW synthesizing protein 5##AK095272|TYW5|129450|tRNA-yW synthesizing protein 5##BC132835|TYW5|129450|tRNA-yW synthesizing protein 5##BC136837|TYW5|129450|tRNA-yW synthesizing protein 5##BC144420|TYW5|129450|tRNA-yW synthesizing protein 5##BX648265|TYW5|129450|tRNA-yW synthesizing protein 5##AK293064|TYW5|129450|tRNA-yW synthesizing protein 5##NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AF193059|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC065817|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	0.976676	CTCF.p2:-16:0.977
chr6	44272636	44272724	reg1006964.p1	11.677	+	BC035022 AK304265 AK301825 NM_182539	-7240	-	TSC_hg19_v1_chr6_+_44244466 AK094365	-28167	+	NM_001137560 TSC_hg19_v1_chr6_+_44238533 BC040881	-34149	+	TSC_hg19_v1_chr6_-_44281067 AB462941 AB033096 BC131728 NM_020745	8346	-	NM_145026 AK058171	37760	+	NM_001253 TSC_hg19_v1_chr6_+_44355294	82592	+	BC035022|TCTE1|202500|t-complex-associated-testis-expressed 1##AK304265|TCTE1|202500|t-complex-associated-testis-expressed 1##AK301825|TCTE1|202500|t-complex-associated-testis-expressed 1##NM_182539|TCTE1|202500|t-complex-associated-testis-expressed 1##AK094365|TMEM151B|441151|transmembrane protein 151B##NM_001137560|TMEM151B|441151|transmembrane protein 151B##AB033096|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)##BC131728|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)##NM_020745|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)##NM_145026|SPATS1|221409|spermatogenesis associated, serine-rich 1##AK058171|SPATS1|221409|spermatogenesis associated, serine-rich 1##NM_001253|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	0.864305	CTCF.p2:2:0.864
chr18	12039048	12039184	reg1009437.p1	11.676	+	TSC_hg19_v1_chr18_+_11981575 BC017176 AF200432 BT007061	-57506	+	TSC_hg19_v1_chr18_+_11981502 BC031560	-57617	+	TSC_hg19_v1_chr18_+_11981424 AF014398 NM_014214	-57687	+	NM_001279 AK122762 AF041378 AY364639	215233	+	TSC_hg19_v1_chr18_+_12308239 AK001295 AK092677 AK311364	269122	+	TSC_hg19_v1_chr18_+_12308246 AK022340 AK098440 AK304616 BC002654 NM_032525 AK298196 BC039717 AB590145 DQ893486 DQ896394	269149	+	BC017176|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##AF200432|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BT007061|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BC031560|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##AF014398|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##NM_014214|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##NM_001279|CIDEA|1149|cell death-inducing DFFA-like effector a##AK122762|CIDEA|1149|cell death-inducing DFFA-like effector a##AF041378|CIDEA|1149|cell death-inducing DFFA-like effector a##AY364639|CIDEA|1149|cell death-inducing DFFA-like effector a##AK001295|TUBB6|84617|tubulin, beta 6 class V##AK092677|TUBB6|84617|tubulin, beta 6 class V##AK311364|TUBB6|84617|tubulin, beta 6 class V##AK022340|TUBB6|84617|tubulin, beta 6 class V##AK098440|TUBB6|84617|tubulin, beta 6 class V##AK304616|TUBB6|84617|tubulin, beta 6 class V##BC002654|TUBB6|84617|tubulin, beta 6 class V##NM_032525|TUBB6|84617|tubulin, beta 6 class V##AK298196|TUBB6|84617|tubulin, beta 6 class V##DQ893486|TUBB6|84617|tubulin, beta 6 class V##DQ896394|TUBB6|84617|tubulin, beta 6 class V	0.976819	CTCF.p2:14:0.977
chr3	182401469	182401602	reg1007607.p2	11.676	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-971397	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-971822	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-984143	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	109752	+	AK296750 TSC_hg19_v1_chr3_+_182511291	109760	+	TSC_hg19_v1_chr3_+_182511375 AF156548	109854	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.010586	
chr16	57625430	57625557	reg1007452.p2	11.675	+	TSC_hg19_v1_chr16_+_57576577 BC032401 NM_153837	-48905	+	TSC_hg19_v1_chr16_+_57576554 AK303661 AK292783 AK160368 AY358447 AK301357	-48939	+	BC008285 BC009941 NM_033212	-55028	-	AK131550 TSC_hg19_v1_chr16_+_57653651 CR936747	28162	+	NM_001145770 NM_005682 AK075270 AY358400	28455	+	AK312405 NM_001145771 NM_001145772 NM_001145773 NM_201524 NM_201525 TSC_hg19_v1_chr16_+_57662543 AK075555 AK299110	36961	+	BC032401|GPR114|221188|G protein-coupled receptor 114##NM_153837|GPR114|221188|G protein-coupled receptor 114##AK303661|GPR114|221188|G protein-coupled receptor 114##AK292783|GPR114|221188|G protein-coupled receptor 114##AK160368|GPR114|221188|G protein-coupled receptor 114##AY358447|GPR114|221188|G protein-coupled receptor 114##AK301357|GPR114|221188|G protein-coupled receptor 114##BC008285|CCDC102A|92922|coiled-coil domain containing 102A##BC009941|CCDC102A|92922|coiled-coil domain containing 102A##NM_033212|CCDC102A|92922|coiled-coil domain containing 102A##AK131550|GPR56|9289|G protein-coupled receptor 56##CR936747|GPR56|9289|G protein-coupled receptor 56##NM_001145770|GPR56|9289|G protein-coupled receptor 56##NM_005682|GPR56|9289|G protein-coupled receptor 56##AK075270|GPR56|9289|G protein-coupled receptor 56##AY358400|GPR56|9289|G protein-coupled receptor 56##AK312405|GPR56|9289|G protein-coupled receptor 56##NM_001145771|GPR56|9289|G protein-coupled receptor 56##NM_001145772|GPR56|9289|G protein-coupled receptor 56##NM_001145773|GPR56|9289|G protein-coupled receptor 56##NM_201524|GPR56|9289|G protein-coupled receptor 56##NM_201525|GPR56|9289|G protein-coupled receptor 56##AK075555|GPR56|9289|G protein-coupled receptor 56##AK299110|GPR56|9289|G protein-coupled receptor 56	0.947447	CTCF.p2:-9:0.873
chr14	77176601	77176739	reg1008439.p1	11.674	+	NM_004452	-338981	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-558364	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-558393	+	TSC_hg19_v1_chr14_+_77227817 AK094330	51130	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	51785	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	52382	+	NM_004452|ESRRB|2103|estrogen-related receptor beta##AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1	0.998104	CTCF.p2:-20:0.998
chr15	84811694	84811825	reg1009158.p1	11.674	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-488932	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-695531	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-695699	+	NM_001243531	29482	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	332522	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	385713	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.990111	CTCF.p2:-15:0.990
chr18	70429908	70430026	reg1007164.p1	11.674	+	NM_182511 TSC_hg19_v1_chr18_-_70211738	-218237	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	-219192	-	TSC_hg19_v1_chr18_+_67956280 BC020082	-2473706	+	AF448839 NM_138999	102966	-	AF448838 BC050329 NM_001201465 NM_138966	104842	-	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	1385060	-	NM_182511|CBLN2|147381|cerebellin 2 precursor##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##BC020082|SOCS6|9306|suppressor of cytokine signaling 6##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15	0.960606	CTCF.p2:-12:0.961
chr2	66656280	66656429	reg1006962.p2	11.674	+	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	-992517	+	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	-996678	-	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	-997142	-	AL832770 BC043503 NM_002398	6169	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	6486	+	TSC_hg19_v1_chr2_+_66666452 AK297109	10096	+	AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein##BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AL832770|MEIS1|4211|Meis homeobox 1##BC043503|MEIS1|4211|Meis homeobox 1##NM_002398|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##AK297109|MEIS1|4211|Meis homeobox 1	0.789101	CTCF.p2:-19:0.789
chr11	20408713	20408890	reg1008094.p2	11.673	+	AF092095 NM_001098523 U69161 AK223010 BC015358 AK222969 AF039103 EU446982 AB463744 CR456821	-23067	+	TSC_hg19_v1_chr11_+_20385346 BC002439 NM_001098522	-23438	+	TSC_hg19_v1_chr11_+_20385268 AK292092 NM_001098520	-23520	+	NM_001145166 NM_001145167 NM_005788 TSC_hg19_v1_chr11_+_20409136 BC064831 BC019339 AK129984	315	+	BC047226 TSC_hg19_v1_chr11_+_20409261 AK301449 AK298185 AK300591 BC037544 AB590779 EU831425 EU831518	459	+	NM_004211 AF085412	212146	+	AF092095|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098523|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##U69161|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AK223010|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##BC015358|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AK222969|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AF039103|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##EU446982|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##CR456821|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##BC002439|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098522|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AK292092|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098520|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001145166|PRMT3|10196|protein arginine methyltransferase 3##NM_001145167|PRMT3|10196|protein arginine methyltransferase 3##NM_005788|PRMT3|10196|protein arginine methyltransferase 3##BC064831|PRMT3|10196|protein arginine methyltransferase 3##BC019339|PRMT3|10196|protein arginine methyltransferase 3##AK129984|PRMT3|10196|protein arginine methyltransferase 3##BC047226|PRMT3|10196|protein arginine methyltransferase 3##AK301449|PRMT3|10196|protein arginine methyltransferase 3##AK298185|PRMT3|10196|protein arginine methyltransferase 3##AK300591|PRMT3|10196|protein arginine methyltransferase 3##BC037544|PRMT3|10196|protein arginine methyltransferase 3##EU831425|PRMT3|10196|protein arginine methyltransferase 3##EU831518|PRMT3|10196|protein arginine methyltransferase 3##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5	1.04031	CTCF.p2:-12:0.997
chr14	69291675	69291826	reg1009121.p1	11.673	+	NM_001244701 AB528867	-28766	-	NM_001244698 NM_004926	-31120	-	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	-32030	-	TSC_hg19_v1_chr14_-_69354901 BX641076	63189	-	BX248020 AK299362 TSC_hg19_v1_chr14_-_69444987	153236	-	BT007207 AB590251 DQ890778 DQ895768 EU716325 FJ410030 TSC_hg19_v1_chr14_-_69445830 M95178 BC015766	154080	-	NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BX641076|ACTN1|87|actinin, alpha 1##BX248020|ACTN1|87|actinin, alpha 1##AK299362|ACTN1|87|actinin, alpha 1##BT007207|ACTN1|87|actinin, alpha 1##DQ890778|ACTN1|87|actinin, alpha 1##DQ895768|ACTN1|87|actinin, alpha 1##EU716325|ACTN1|87|actinin, alpha 1##FJ410030|ACTN1|87|actinin, alpha 1##M95178|ACTN1|87|actinin, alpha 1##BC015766|ACTN1|87|actinin, alpha 1	0.999247	CTCF.p2:1:0.999
chr15	93461271	93461414	reg1009327.p1	11.673	+	AK295909 TSC_hg19_v1_chr15_+_93447798	-13582	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	-17762	+	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	-17856	+	AL390083 TSC_hg19_v1_chr15_-_93616347	154986	-	TSC_hg19_v1_chr15_-_93616364 AK074966 BC015886 NM_001166286	155031	-	AK309814 AK125204 NM_001166288 NM_001166289	155572	-	AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##AL390083|RGMA|56963|RGM domain family, member A##AK074966|RGMA|56963|RGM domain family, member A##BC015886|RGMA|56963|RGM domain family, member A##NM_001166286|RGMA|56963|RGM domain family, member A##AK309814|RGMA|56963|RGM domain family, member A##AK125204|RGMA|56963|RGM domain family, member A##NM_001166288|RGMA|56963|RGM domain family, member A##NM_001166289|RGMA|56963|RGM domain family, member A	0.999852	CTCF.p2:9:1.000
chr7	128027866	128027994	reg1010004.p1	11.673	+	BC063892 NM_001114726 NM_001174164	-26233	-	TSC_hg19_v1_chr7_-_127983944 BC013889 AK222716 AK300500 AK295976 AK001239 NM_001166135 NM_018077	-43994	-	CU680694 TSC_hg19_v1_chr7_-_127983862	-44076	-	AK054640 AK293413 AK297943 TSC_hg19_v1_chr7_-_128046013 NM_001142573 NM_001142574 NM_001142575	18087	-	AK131294 TSC_hg19_v1_chr7_-_128049984 CR933672	22050	-	TSC_hg19_v1_chr7_-_128050037 AK092452 BC033622 AK054667 AK122994 NM_000883 NM_001102605 NM_001142576 NM_183243	22107	-	BC063892|PRRT4|401399|proline-rich transmembrane protein 4##NM_001114726|PRRT4|401399|proline-rich transmembrane protein 4##NM_001174164|PRRT4|401399|proline-rich transmembrane protein 4##BC013889|RBM28|55131|RNA binding motif protein 28##AK222716|RBM28|55131|RNA binding motif protein 28##AK300500|RBM28|55131|RNA binding motif protein 28##AK001239|RBM28|55131|RNA binding motif protein 28##NM_001166135|RBM28|55131|RNA binding motif protein 28##NM_018077|RBM28|55131|RNA binding motif protein 28##AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK131294|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##CR933672|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK092452|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC033622|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054667|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK122994|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_000883|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001102605|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142576|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_183243|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	0.99649	CTCF.p2:-4:0.996
chr9	92213164	92213309	reg1008944.p1	11.673	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-100229	-	BC054500 NM_001142287 NM_006378	-118626	-	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-279818	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	6745	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	1191883	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1350800	+	BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase	0.680707	CTCF.p2:-20:0.681
chr1	32254934	32255045	reg1008561.p1	11.672	+	AB005298 NM_001703	-25348	-	TSC_hg19_v1_chr1_-_32169619 NM_001856	-85296	-	M92642 TSC_hg19_v1_chr1_-_32169608	-85407	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	9251	-	TSC_hg19_v1_chr1_-_32264318 AK095829	9332	-	BC114430 AK131447 NM_144569 AK091016 AX746730	26610	-	AB005298|BAI2|576|brain-specific angiogenesis inhibitor 2##NM_001703|BAI2|576|brain-specific angiogenesis inhibitor 2##NM_001856|COL16A1|1307|collagen, type XVI, alpha 1##M92642|COL16A1|1307|collagen, type XVI, alpha 1##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1##BC114430|SPOCD1|90853|SPOC domain containing 1##AK131447|SPOCD1|90853|SPOC domain containing 1##NM_144569|SPOCD1|90853|SPOC domain containing 1##AK091016|SPOCD1|90853|SPOC domain containing 1	0.453375	CTCF.p2:87:0.309
chr1	70975897	70976002	reg1006427.p1	11.672	+	TSC_hg19_v1_chr1_+_70876950 NM_001190463 NM_001902 NM_153742 AK310269 AK303946 AK223376 BC015807 S52028 S52784 EU832313 EU832398 BT006882	-98969	+	TSC_hg19_v1_chr1_+_70820493 NM_001031693 NM_001036645 NM_001036646 AF126164 BC010922 AF126163	-155372	+	TSC_hg19_v1_chr1_-_70820406 BC016937 BC028840 AL136717 NM_030816	-155544	-	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	537430	-	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	570758	-	NM_005455 NM_203350	571022	-	NM_001190463|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001902|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_153742|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK310269|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK303946|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK223376|CTH|1491|cystathionase (cystathionine gamma-lyase)##BC015807|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52028|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52784|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832313|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832398|CTH|1491|cystathionase (cystathionine gamma-lyase)##BT006882|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001031693|HHLA3|11147|HERV-H LTR-associating 3##NM_001036645|HHLA3|11147|HERV-H LTR-associating 3##NM_001036646|HHLA3|11147|HERV-H LTR-associating 3##AF126164|HHLA3|11147|HERV-H LTR-associating 3##BC010922|HHLA3|11147|HERV-H LTR-associating 3##AF126163|HHLA3|11147|HERV-H LTR-associating 3##BC016937|ANKRD13C|81573|ankyrin repeat domain 13C##BC028840|ANKRD13C|81573|ankyrin repeat domain 13C##AL136717|ANKRD13C|81573|ankyrin repeat domain 13C##NM_030816|ANKRD13C|81573|ankyrin repeat domain 13C##AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2	0.985813	CTCF.p2:26:0.986
chr7	18385400	18385528	reg1008856.p1	11.672	+	AK097178 TSC_hg19_v1_chr7_+_18330071	-55405	+	TSC_hg19_v1_chr7_+_18126583 AK304298 NM_001204144	-258873	+	BC062797 BC005309 M57423 NM_175886	-317999	-	TSC_hg19_v1_chr7_+_18535361 BC092441 BC150328 AB018287 AJ459808 BC152405 NM_001204145 NM_001204146 NM_014707 NM_178423 AK297404 AK316109 AY429540	149935	+	CR749550 EU832154 EU832248 TSC_hg19_v1_chr7_+_18535882 NM_058176 NM_178425 AB385379 AY032737 AY032738 AY197371 EU832247 BC111735	150407	+	NM_001204147 NM_001204148 TSC_hg19_v1_chr7_+_18548932 AK304410	163459	+	AK097178|HDAC9|9734|histone deacetylase 9##AK304298|HDAC9|9734|histone deacetylase 9##NM_001204144|HDAC9|9734|histone deacetylase 9##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC150328|HDAC9|9734|histone deacetylase 9##AB018287|HDAC9|9734|histone deacetylase 9##AJ459808|HDAC9|9734|histone deacetylase 9##BC152405|HDAC9|9734|histone deacetylase 9##NM_001204145|HDAC9|9734|histone deacetylase 9##NM_001204146|HDAC9|9734|histone deacetylase 9##NM_014707|HDAC9|9734|histone deacetylase 9##NM_178423|HDAC9|9734|histone deacetylase 9##AK297404|HDAC9|9734|histone deacetylase 9##AK316109|HDAC9|9734|histone deacetylase 9##AY429540|HDAC9|9734|histone deacetylase 9##CR749550|HDAC9|9734|histone deacetylase 9##EU832154|HDAC9|9734|histone deacetylase 9##EU832248|HDAC9|9734|histone deacetylase 9##NM_058176|HDAC9|9734|histone deacetylase 9##NM_178425|HDAC9|9734|histone deacetylase 9##AY032737|HDAC9|9734|histone deacetylase 9##AY032738|HDAC9|9734|histone deacetylase 9##AY197371|HDAC9|9734|histone deacetylase 9##EU832247|HDAC9|9734|histone deacetylase 9##BC111735|HDAC9|9734|histone deacetylase 9##NM_001204147|HDAC9|9734|histone deacetylase 9##NM_001204148|HDAC9|9734|histone deacetylase 9##AK304410|HDAC9|9734|histone deacetylase 9	0.718755	CTCF.p2:8:0.719
chr21	39531511	39531637	reg1006769.p1	11.671	+	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	-38173	-	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	-242863	-	NM_130438 NM_001396 U52373 D85759 U58496	-738954	+	BC013327 NM_002243	97089	+	D87291 NM_170736 AK292812	97355	+	NM_170737	112854	+	HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170737|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.999921	CTCF.p2:-12:1.000
chr12	4105100	4105249	reg1008310.p1	11.669	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-122674	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-242792	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-242906	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	277870	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	325217	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	383626	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.99968	CTCF.p2:-19:1.000
chr15	57506121	57506250	reg1006746.p2	11.669	+	TSC_hg19_v1_chr15_+_57210977 M83233	-295185	+	TSC_hg19_v1_chr15_+_57210901 BC050556 BC051769 M80627	-295283	+	TSC_hg19_v1_chr15_+_57210872 AL831981 AK294617 AK310708 AK312710	-295317	+	TSC_hg19_v1_chr15_+_57511630 AK294991 AK304007 AK311359 AK308101 NM_207040 BX537967 AM393573	5482	+	AK056673 AK307410 NM_001252335 NM_032866 TSC_hg19_v1_chr15_+_57668732 AY274808 BC030995 AY610514	162532	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	377980	+	M83233|TCF12|6938|transcription factor 12##BC050556|TCF12|6938|transcription factor 12##BC051769|TCF12|6938|transcription factor 12##M80627|TCF12|6938|transcription factor 12##AL831981|TCF12|6938|transcription factor 12##AK294617|TCF12|6938|transcription factor 12##AK310708|TCF12|6938|transcription factor 12##AK312710|TCF12|6938|transcription factor 12##AK294991|TCF12|6938|transcription factor 12##AK304007|TCF12|6938|transcription factor 12##AK311359|TCF12|6938|transcription factor 12##AK308101|TCF12|6938|transcription factor 12##NM_207040|TCF12|6938|transcription factor 12##BX537967|TCF12|6938|transcription factor 12##AM393573|TCF12|6938|transcription factor 12##AK056673|CGNL1|84952|cingulin-like 1##AK307410|CGNL1|84952|cingulin-like 1##NM_001252335|CGNL1|84952|cingulin-like 1##NM_032866|CGNL1|84952|cingulin-like 1##AY274808|CGNL1|84952|cingulin-like 1##BC030995|CGNL1|84952|cingulin-like 1##AY610514|CGNL1|84952|cingulin-like 1##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1	0.821086	CTCF.p2:17:0.821
chr13	25302255	25302364	reg1007018.p1	11.668	+	AK292968 NM_001185085 NM_001676	-47761	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	-215398	-	BC040438 NM_178540 AY358145	-418592	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	36010	+	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	194660	-	TSC_hg19_v1_chr13_-_25497054 NM_018451	194760	-	AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##NM_018451|CENPJ|55835|centromere protein J	0.937169	CTCF.p2:-2:0.924
chr18	30129349	30129469	reg1008033.p1	11.668	+	AL834491 BC121067 BC121068 AK025263 NM_001242409 NM_022751	-78989	-	TSC_hg19_v1_chr18_-_29993196 D28353	-136214	-	AY695931 NM_005925 X81333 TSC_hg19_v1_chr18_+_29770001 BC136559 BC144244	-359412	+	BC021267 AB037805 NM_020805	223498	-	BC130535 BC144178 BC144179 NM_001105528	890603	-	BC062719 BC091517 AK126038 NM_198995	891250	-	AL834491|FAM59A|64762|family with sequence similarity 59, member A##BC121067|FAM59A|64762|family with sequence similarity 59, member A##BC121068|FAM59A|64762|family with sequence similarity 59, member A##AK025263|FAM59A|64762|family with sequence similarity 59, member A##NM_001242409|FAM59A|64762|family with sequence similarity 59, member A##NM_022751|FAM59A|64762|family with sequence similarity 59, member A##AY695931|MEP1B|4225|meprin A, beta##NM_005925|MEP1B|4225|meprin A, beta##X81333|MEP1B|4225|meprin A, beta##BC136559|MEP1B|4225|meprin A, beta##BC144244|MEP1B|4225|meprin A, beta##BC021267|KLHL14|57565|kelch-like 14 (Drosophila)##AB037805|KLHL14|57565|kelch-like 14 (Drosophila)##NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)##BC130535|C18orf34|374864|chromosome 18 open reading frame 34##BC144178|C18orf34|374864|chromosome 18 open reading frame 34##BC144179|C18orf34|374864|chromosome 18 open reading frame 34##NM_001105528|C18orf34|374864|chromosome 18 open reading frame 34##BC062719|C18orf34|374864|chromosome 18 open reading frame 34##BC091517|C18orf34|374864|chromosome 18 open reading frame 34##AK126038|C18orf34|374864|chromosome 18 open reading frame 34##NM_198995|C18orf34|374864|chromosome 18 open reading frame 34	0.984038	CTCF.p2:-1:0.984
chr9	42764076	42764209	reg1008648.p1	11.668	+	NM_001099279 NM_199244	-46909	+	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	-395784	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-809228	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	369345	-	NM_001145196	866587	-	TSC_hg19_v1_chr9_+_43684876 NM_001201380	920701	+	NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B	0.99859	CTCF.p2:-11:0.999
chr19	13388074	13388232	reg1008284.p1	11.667	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-123973	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-126861	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-127014	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	229023	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	454426	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	470566	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.99981	CTCF.p2:4:1.000
chr5	118651466	118651614	reg1009371.p1	11.667	+	AF070671 TSC_hg19_v1_chr5_+_118604523	-47023	+	NM_001077654 TSC_hg19_v1_chr5_+_118604492 AK097884 AK001931	-47082	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	-244375	+	BC007014 NM_014350 BC005352 TSC_hg19_v1_chr5_+_118691687	40078	+	TSC_hg19_v1_chr5_+_118691713 AF099935 AK001850 AF099936 CU675493	40198	+	TSC_hg19_v1_chr5_+_118788215 NM_000414 NM_001199292 AK301212 AK312449 NM_001199291 BC003098 AK293254 AB208932 X87176 AK299685 AK298075 CU678374 DQ891866 DQ895055	136656	+	AF070671|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_001077654|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK097884|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001931|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1##BC007014|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_014350|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC005352|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099935|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001850|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099936|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_000414|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199292|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK301212|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK312449|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199291|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC003098|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK293254|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##X87176|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK299685|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK298075|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ891866|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ895055|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4	0.0	
chr1	160645492	160645625	reg1006984.p2	11.666	+	AK314244 NM_003037 BC012602	-28495	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	-96270	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	-96311	-	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	36028	-	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	63506	+	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	120440	+	AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9	0.998862	CTCF.p2:-10:0.999
chr3	53763798	53763942	reg1008361.p1	11.666	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	-234759	+	TSC_hg19_v1_chr3_+_53528709 M76558	-235211	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	-382277	-	TSC_hg19_v1_chr3_-_53880427 NM_018397	116549	-	TSC_hg19_v1_chr3_+_53880576 NM_018725	116702	+	TSC_hg19_v1_chr3_+_53880594 AK307749	116725	+	NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018397|CHDH|55349|choline dehydrogenase##NM_018725|IL17RB|55540|interleukin 17 receptor B##AK307749|IL17RB|55540|interleukin 17 receptor B	0.939367	CTCF.p2:-8:0.939
chr11	75417418	75417561	reg1009833.p1	11.665	+	AK123340 TSC_hg19_v1_chr11_-_75379695	-37815	-	AB527183 BC139780 AB058781 BC150254 NM_033063 NM_207577	-38043	-	TSC_hg19_v1_chr11_-_75379154 BC063860 BC041411	-38334	-	AK026297 AK291998 AY157608 BC103876 BC103877 BC103878 NM_025098	11409	+	TSC_hg19_v1_chr11_+_75479774 NM_032564 BC015234	62288	+	TSC_hg19_v1_chr11_+_75479822 AB048286 AY780646 AY358532 AL834287 AF384161 CU677247 AY780647	62434	+	AK123340|MAP6|4135|microtubule-associated protein 6##BC139780|MAP6|4135|microtubule-associated protein 6##AB058781|MAP6|4135|microtubule-associated protein 6##BC150254|MAP6|4135|microtubule-associated protein 6##NM_033063|MAP6|4135|microtubule-associated protein 6##NM_207577|MAP6|4135|microtubule-associated protein 6##BC063860|MAP6|4135|microtubule-associated protein 6##BC041411|MAP6|4135|microtubule-associated protein 6##AK026297|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##AK291998|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##AY157608|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103876|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103877|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103878|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##NM_025098|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##NM_032564|DGAT2|84649|diacylglycerol O-acyltransferase 2##BC015234|DGAT2|84649|diacylglycerol O-acyltransferase 2##AB048286|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY358532|DGAT2|84649|diacylglycerol O-acyltransferase 2##AL834287|DGAT2|84649|diacylglycerol O-acyltransferase 2##AF384161|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY780647|DGAT2|84649|diacylglycerol O-acyltransferase 2	0.999505	CTCF.p2:1:1.000
chr3	194992349	194992492	reg1006764.p3	11.665	+	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	-570	-	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-584917	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-585797	+	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	171282	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	277693	-	TSC_hg19_v1_chr3_-_195306274 BT019860 BT019861 CR456838 CR541773 CU675645 DQ892668 DQ896124	313882	-	BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BT019860|APOD|347|apolipoprotein D##BT019861|APOD|347|apolipoprotein D##CR456838|APOD|347|apolipoprotein D##CR541773|APOD|347|apolipoprotein D##DQ892668|APOD|347|apolipoprotein D##DQ896124|APOD|347|apolipoprotein D	0.981084	CTCF.p2:-14:0.981
chr1	198740867	198740958	reg1004712.p1	11.664	+	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-132582	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-132687	+	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	-132739	+	TSC_hg19_v1_chr1_-_198906559 EF413001	165635	-	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	1255957	+	AK316513 TSC_hg19_v1_chr1_+_200011716	1270812	+	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	0.882594	CTCF.p2:-28:0.883
chr13	96313361	96313495	reg1007831.p2	11.664	+	BC011450 AB023213 TSC_hg19_v1_chr13_-_96296961 BC041804 NM_014934 NM_198968	-16488	-	AB385415 AF272347 AF272348 TSC_hg19_v1_chr13_-_96294398	-19085	-	TSC_hg19_v1_chr13_+_96204946 NM_006984 BC010920 U89916 AK315737 DQ892831 DQ896077 CR456845	-108454	+	AK292947 NM_006260 TSC_hg19_v1_chr13_+_96329392	15966	+	TSC_hg19_v1_chr13_+_96329401 AK312861	15973	+	TSC_hg19_v1_chr13_+_96329409 BC047936 BC020215 BC033823 AB384852 CU690538	16030	+	BC011450|DZIP1|22873|DAZ interacting protein 1##AB023213|DZIP1|22873|DAZ interacting protein 1##BC041804|DZIP1|22873|DAZ interacting protein 1##NM_014934|DZIP1|22873|DAZ interacting protein 1##NM_198968|DZIP1|22873|DAZ interacting protein 1##AF272347|DZIP1|22873|DAZ interacting protein 1##AF272348|DZIP1|22873|DAZ interacting protein 1##NM_006984|CLDN10|9071|claudin 10##BC010920|CLDN10|9071|claudin 10##U89916|CLDN10|9071|claudin 10##AK315737|CLDN10|9071|claudin 10##DQ892831|CLDN10|9071|claudin 10##DQ896077|CLDN10|9071|claudin 10##CR456845|CLDN10|9071|claudin 10##AK292947|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##NM_006260|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##AK312861|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##BC047936|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##BC033823|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3	0.988815	CTCF.p2:17:0.989
chr2	205556776	205556887	reg1007207.p1	11.664	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-146112	+	TSC_hg19_v1_chr2_+_205410560 AX765687 AX765741 AK056157	-146237	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	-146341	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	990347	+	TSC_hg19_v1_chr2_+_206547371 AK290934	990530	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	1394080	-	AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK056157|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AK290934|NRP2|8828|neuropilin 2##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D	0.962694	CTCF.p2:-1:0.963
chr5	73937957	73938078	reg1007240.p2	11.664	+	AK096578 NM_003633	-769	-	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	-1554	-	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	-828667	+	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	42991	+	TSC_hg19_v1_chr5_+_73981057 AK130375 BC017378 CU675968 BT009919 M19735	43071	+	TSC_hg19_v1_chr5_-_74029248 AK126251	91255	-	AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)##AK130375|HEXB|3074|hexosaminidase B (beta polypeptide)##BC017378|HEXB|3074|hexosaminidase B (beta polypeptide)##BT009919|HEXB|3074|hexosaminidase B (beta polypeptide)##M19735|HEXB|3074|hexosaminidase B (beta polypeptide)	0.071055	
chr5	78320931	78321047	reg1006701.p1	11.664	+	NM_000046	-38633	-	TSC_hg19_v1_chr5_-_78281699 BC029051 NM_198709	-39263	-	TSC_hg19_v1_chr5_-_78281630 M32373	-39393	-	TSC_hg19_v1_chr5_-_78365450 AF111858 AK057641 NM_013391 AK300894 AK303873 AK314736	44460	-	NM_001178005 NM_017614 TSC_hg19_v1_chr5_+_78365558	44565	+	AF257473 TSC_hg19_v1_chr5_+_78365591 AK298298 AK315520 BC020665 DQ891370 DQ894550 AB590411 CU676622	44604	+	NM_000046|ARSB|411|arylsulfatase B##BC029051|ARSB|411|arylsulfatase B##NM_198709|ARSB|411|arylsulfatase B##M32373|ARSB|411|arylsulfatase B##AF111858|DMGDH|29958|dimethylglycine dehydrogenase##AK057641|DMGDH|29958|dimethylglycine dehydrogenase##NM_013391|DMGDH|29958|dimethylglycine dehydrogenase##AK300894|DMGDH|29958|dimethylglycine dehydrogenase##AK303873|DMGDH|29958|dimethylglycine dehydrogenase##AK314736|DMGDH|29958|dimethylglycine dehydrogenase##NM_001178005|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_017614|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AF257473|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK298298|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK315520|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##BC020665|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ891370|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ894550|BHMT2|23743|betaine--homocysteine S-methyltransferase 2	1.035428	CTCF.p2:-8:0.974
chr11	62107796	62107905	reg1005424.p1	11.663	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	-2902	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	-3025	+	HQ258026 AY236538 BC130639 BC130645 AY359052 NM_206998	-41341	-	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	78686	+	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	206386	-	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	206464	-	AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##HQ258026|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY236538|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130639|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130645|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY359052|SCGB1D4|404552|secretoglobin, family 1D, member 4##NM_206998|SCGB1D4|404552|secretoglobin, family 1D, member 4##AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein	0.988833	CTCF.p2:0:0.989
chr1	31255323	31255421	reg1007044.p1	11.663	+	TSC_hg19_v1_chr1_-_31230697 NM_006762	-24682	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	-24740	-	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	-58940	-	TSC_hg19_v1_chr1_-_31345363 AL049426	90026	-	AB385258 AF248634 NM_014654 TSC_hg19_v1_chr1_-_31381606	126176	-	TSC_hg19_v1_chr1_-_31538543 BC013398 D43951 AK291779 AK300457 AF315592 AK096476 AK222605	283145	-	NM_006762|LAPTM5|7805|lysosomal protein transmembrane 5##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##AL049426|SDC3|9672|syndecan 3##AF248634|SDC3|9672|syndecan 3##NM_014654|SDC3|9672|syndecan 3##BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)##D43951|PUM1|9698|pumilio homolog 1 (Drosophila)##AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)##AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)##AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)##AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)##AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)	0.999111	CTCF.p2:-24:0.999
chr3	129961841	129961977	reg1007974.p1	11.663	+	TSC_hg19_v1_chr3_-_129830331 BC071676	-131560	-	TSC_hg19_v1_chr3_-_129830276 BC083497	-131614	-	NM_001136152 BC127755	-161171	+	EU085556 NM_153264 AM906078	102509	+	AM774225 NM_001102608	317268	+	BC127105 BC127106 TSC_hg19_v1_chr3_-_130465651 AK314219 BC110318 BC009899 BC017332 BC057239 NM_014602	503694	-	NM_001136152|ALG1L2|644974|asparagine-linked glycosylation 1-like 2##EU085556|COL6A5|256076|collagen, type VI, alpha 5##NM_153264|COL6A5|256076|collagen, type VI, alpha 5##AM906078|COL6A5|256076|collagen, type VI, alpha 5##AM774225|COL6A6|131873|collagen, type VI, alpha 6##NM_001102608|COL6A6|131873|collagen, type VI, alpha 6##BC127105|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC127106|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AK314219|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC110318|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC009899|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC017332|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC057239|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_014602|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4	0.742705	CTCF.p2:9:0.743
chr12	52374229	52374347	reg1006858.p2	11.662	+	AK299496 NM_020327	-27125	+	TSC_hg19_v1_chr12_+_52345493 AK299120 L10125 BC000254 AB384957 BT007072 CU674106 EU831986 EU832079 L10126 U14722 Z22536	-28791	+	TSC_hg19_v1_chr12_+_52345437 BC040531 NM_004302 NM_020328	-28843	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	26453	+	AK297526 NM_001202233	42327	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	70928	+	AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB##AK299120|ACVR1B|91|activin A receptor, type IB##L10125|ACVR1B|91|activin A receptor, type IB##BC000254|ACVR1B|91|activin A receptor, type IB##BT007072|ACVR1B|91|activin A receptor, type IB##EU831986|ACVR1B|91|activin A receptor, type IB##EU832079|ACVR1B|91|activin A receptor, type IB##L10126|ACVR1B|91|activin A receptor, type IB##U14722|ACVR1B|91|activin A receptor, type IB##Z22536|ACVR1B|91|activin A receptor, type IB##BC040531|ACVR1B|91|activin A receptor, type IB##NM_004302|ACVR1B|91|activin A receptor, type IB##NM_020328|ACVR1B|91|activin A receptor, type IB##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1	1.63058	CTCF.p2:11:1.000	CTCF.p2:39:0.631
chr6	158493283	158493425	reg1009119.p1	11.662	+	NM_001178088 TSC_hg19_v1_chr6_+_158438191 BX648749 AB002346 AF039945	-55182	+	TSC_hg19_v1_chr6_+_158402928 AY152396 AB384465	-90345	+	TSC_hg19_v1_chr6_+_158402923 AF318616	-90435	+	BC048335 BC001705 BC028594 BX648104 TSC_hg19_v1_chr6_-_158589279	95886	-	TSC_hg19_v1_chr6_-_158589295 AK027823 BC060795 NM_032861	95946	-	NM_207118 TSC_hg19_v1_chr6_+_158589381 AK055106 BC056906 AJ634743	96037	+	NM_001178088|SYNJ2|8871|synaptojanin 2##BX648749|SYNJ2|8871|synaptojanin 2##AB002346|SYNJ2|8871|synaptojanin 2##AF039945|SYNJ2|8871|synaptojanin 2##AY152396|SYNJ2|8871|synaptojanin 2##AF318616|SYNJ2|8871|synaptojanin 2##BC048335|SERAC1|84947|serine active site containing 1##BC001705|SERAC1|84947|serine active site containing 1##BC028594|SERAC1|84947|serine active site containing 1##BX648104|SERAC1|84947|serine active site containing 1##AK027823|SERAC1|84947|serine active site containing 1##BC060795|SERAC1|84947|serine active site containing 1##NM_032861|SERAC1|84947|serine active site containing 1##NM_207118|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AK055106|GTF2H5|404672|general transcription factor IIH, polypeptide 5##BC056906|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AJ634743|GTF2H5|404672|general transcription factor IIH, polypeptide 5	0.993942	CTCF.p2:16:0.994
chr16	73230773	73230918	reg1005282.p1	11.661	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-138259	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-148624	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-239140	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	1099848	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	1099926	+	TSC_hg19_v1_chr16_-_74401811 AK124154	1170967	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.451248	CTCF.p2:12:0.426
chr5	171533983	171534124	reg1007457.p1	11.661	+	BC026213 NM_012300 NM_033644 NM_033645	-100177	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	-100409	-	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	-100525	-	AB015718 TSC_hg19_v1_chr5_-_171615170	81085	-	AK307943 TSC_hg19_v1_chr5_-_171615203	81150	-	TSC_hg19_v1_chr5_-_171615241 BC070077 AK313350	81220	-	BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB015718|STK10|6793|serine/threonine kinase 10##AK307943|STK10|6793|serine/threonine kinase 10##BC070077|STK10|6793|serine/threonine kinase 10##AK313350|STK10|6793|serine/threonine kinase 10	0.904747	CTCF.p2:-5:0.905
chr12	110243219	110243326	reg1006877.p2	11.660	+	TSC_hg19_v1_chr12_+_110205819 AK074806	-37408	+	NM_032829 BC020193	-91085	+	M88468 AB209722 TSC_hg19_v1_chr12_+_110011620 AK315678 AK293130 AK295338 BC016140	-231641	+	AB073669 AB100308 AF258465 AF263523 DQ059644 DQ059645 DQ059646 NM_001177431 AB590809 NM_001177428 NM_001177433 NM_147204 AB032427	9375	-	TSC_hg19_v1_chr12_-_110271182 AL834192	27915	-	BC117426 BC143307 BC143315 TSC_hg19_v1_chr12_-_110271207 AJ296305 NM_021625	27936	-	AK074806|C12orf34|84915|chromosome 12 open reading frame 34##NM_032829|C12orf34|84915|chromosome 12 open reading frame 34##BC020193|C12orf34|84915|chromosome 12 open reading frame 34##M88468|MVK|4598|mevalonate kinase##AB209722|MVK|4598|mevalonate kinase##AK315678|MVK|4598|mevalonate kinase##AK293130|MVK|4598|mevalonate kinase##AK295338|MVK|4598|mevalonate kinase##BC016140|MVK|4598|mevalonate kinase##AB073669|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB100308|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AF258465|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AF263523|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059644|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059645|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059646|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177431|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177428|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177433|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_147204|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB032427|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AL834192|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC117426|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143307|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143315|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AJ296305|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_021625|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4	0.985681	CTCF.p2:-3:0.986
chr12	93793071	93793201	reg1007684.p1	11.660	+	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	-21244	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-470038	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-470093	-	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	42550	-	TSC_hg19_v1_chr12_-_93835718 D83004	42582	-	TSC_hg19_v1_chr12_-_93835724 BC000396	42602	-	NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC000396|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.816289	CTCF.p2:7:0.816
chr7	32886354	32886489	reg1009867.p1	11.660	+	TSC_hg19_v1_chr7_+_32767741 AK094370 BC126382 BC126384	-118683	+	TSC_hg19_v1_chr7_+_32535168 AK090619 AX746537 NM_015060 BC027724 CU693288	-351191	+	TSC_hg19_v1_chr7_+_32535132 AL833560	-351326	+	AK292802 BC047107 TSC_hg19_v1_chr7_-_32931241	44840	-	TSC_hg19_v1_chr7_-_32931372 BC037887	44948	-	TSC_hg19_v1_chr7_-_32931481 NM_015483	45030	-	AK094370|ZNRF2P1|441208|zinc and ring finger 2 pseudogene 1##BC126382|ZNRF2P1|441208|zinc and ring finger 2 pseudogene 1##BC126384|ZNRF2P1|441208|zinc and ring finger 2 pseudogene 1##AK090619|AVL9|23080|AVL9 homolog (S. cerevisiase)##NM_015060|AVL9|23080|AVL9 homolog (S. cerevisiase)##BC027724|AVL9|23080|AVL9 homolog (S. cerevisiase)##AL833560|AVL9|23080|AVL9 homolog (S. cerevisiase)##AK292802|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##BC047107|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##BC037887|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##NM_015483|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2	0.999008	CTCF.p2:-10:0.999
chr17	58513401	58513522	reg1007812.p2	11.659	+	TSC_hg19_v1_chr17_+_58499858 NM_181707 BC036356 BC048806	-13582	+	TSC_hg19_v1_chr17_-_58469580 NM_032582 AK057301	-43789	-	TSC_hg19_v1_chr17_-_58469447 AF533230	-44003	-	AB587349 TSC_hg19_v1_chr17_-_58603343 AK292227	89868	-	AK307666 TSC_hg19_v1_chr17_-_58603582 BC018121 AF017782 D86981 NM_006380	90076	-	TSC_hg19_v1_chr17_+_58677553 BC060877 NM_003620 AK312902 AK299773 U78305	164083	+	NM_181707|C17orf64|124773|chromosome 17 open reading frame 64##BC036356|C17orf64|124773|chromosome 17 open reading frame 64##BC048806|C17orf64|124773|chromosome 17 open reading frame 64##NM_032582|USP32|84669|ubiquitin specific peptidase 32##AK057301|USP32|84669|ubiquitin specific peptidase 32##AF533230|USP32|84669|ubiquitin specific peptidase 32##AK292227|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##AK307666|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##BC018121|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##AF017782|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##D86981|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##NM_006380|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D	0.954833	CTCF.p2:4:0.955
chr11	33351385	33351525	reg1009338.p1	11.658	+	TSC_hg19_v1_chr11_+_33350077 AY425958	-1345	+	TSC_hg19_v1_chr11_+_33279873 AK293009	-71586	+	NM_001048200 NM_005734 TSC_hg19_v1_chr11_+_33279272 Y09306 AF305239	-72170	+	TSC_hg19_v1_chr11_+_33363104 AK304063	11689	+	TSC_hg19_v1_chr11_+_33563772 AK124395 NM_012194	212369	+	NM_001166692	370830	-	AY425958|HIPK3|10114|homeodomain interacting protein kinase 3##AK293009|HIPK3|10114|homeodomain interacting protein kinase 3##NM_001048200|HIPK3|10114|homeodomain interacting protein kinase 3##NM_005734|HIPK3|10114|homeodomain interacting protein kinase 3##Y09306|HIPK3|10114|homeodomain interacting protein kinase 3##AF305239|HIPK3|10114|homeodomain interacting protein kinase 3##AK304063|HIPK3|10114|homeodomain interacting protein kinase 3##AK124395|C11orf41|25758|chromosome 11 open reading frame 41##NM_012194|C11orf41|25758|chromosome 11 open reading frame 41##NM_001166692|C11orf91|100131378|chromosome 11 open reading frame 91	0.922713	CTCF.p2:22:0.923
chr20	52720083	52720227	reg1009439.p1	11.658	+	AK315220 NM_003657	-32852	-	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	-33093	-	TSC_hg19_v1_chr20_-_52210810 AK290350	-509356	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	70365	-	TSC_hg19_v1_chr20_+_52824396 NM_002623	104292	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	104482	+	AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK290350|ZNF217|7764|zinc finger protein 217##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_002623|PFDN4|5203|prefoldin subunit 4##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4	0.744886	CTCF.p2:-4:0.745
chr7	154536060	154536167	reg1007423.p1	11.658	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	-533728	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	-786355	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	-951713	+	TSC_hg19_v1_chr7_+_154720213 BC033053 AK311721 AK056609 BC050402	184084	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	258557	-	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	259098	+	AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##BC033053|LOC100132707|100132707|uncharacterized LOC100132707##AK311721|LOC100132707|100132707|uncharacterized LOC100132707##AK056609|LOC100132707|100132707|uncharacterized LOC100132707##BC050402|LOC100132707|100132707|uncharacterized LOC100132707##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781	0.998871	CTCF.p2:11:0.999
chr1	16129988	16130138	reg1007942.p1	11.657	+	NM_001024216 AB463637 DQ891730 DQ894907 AY180161	-38595	+	AF459643 NM_001024215 AK027444	-39052	+	TSC_hg19_v1_chr1_+_16085245 NM_017556	-44786	+	TSC_hg19_v1_chr1_-_16134192 NM_001089591	4129	-	BC012991 TSC_hg19_v1_chr1_-_16161389	31271	-	TSC_hg19_v1_chr1_-_16162350 AK094772	32293	-	NM_001024216|FBLIM1|54751|filamin binding LIM protein 1##DQ891730|FBLIM1|54751|filamin binding LIM protein 1##DQ894907|FBLIM1|54751|filamin binding LIM protein 1##AY180161|FBLIM1|54751|filamin binding LIM protein 1##AF459643|FBLIM1|54751|filamin binding LIM protein 1##NM_001024215|FBLIM1|54751|filamin binding LIM protein 1##AK027444|FBLIM1|54751|filamin binding LIM protein 1##NM_017556|FBLIM1|54751|filamin binding LIM protein 1##NM_001089591|UQCRHL|440567|ubiquinol-cytochrome c reductase hinge protein-like##AK094772|FLJ37453|729614|uncharacterized LOC729614	0.863962	CTCF.p2:-28:0.864
chr6	126091058	126091182	reg1006587.p1	11.656	+	TSC_hg19_v1_chr6_+_126070895 AB463717 AF311884 BT020067 BT020068 CU675765	-20212	+	AK289943 AF232238 AB044755 BC007707 TSC_hg19_v1_chr6_+_126070853 AF237949 AJ249545	-20278	+	TSC_hg19_v1_chr6_+_126070775 AF173901	-20354	+	TSC_hg19_v1_chr6_+_126102306 AF493978 NM_001199619 NM_001199620 AK307395 BC137094 BC137095	11214	+	TSC_hg19_v1_chr6_+_126111841 NM_001122842 NM_001199621 NM_181782	20733	+	TSC_hg19_v1_chr6_+_126112105 BC036461 AK127512 AB074157 AK294558 BX537385 AL832621 AL832628 AB074156	20988	+	AF311884|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##BT020067|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##BT020068|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AK289943|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF232238|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AB044755|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##BC007707|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF237949|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AJ249545|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF173901|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF493978|NCOA7|135112|nuclear receptor coactivator 7##NM_001199619|NCOA7|135112|nuclear receptor coactivator 7##NM_001199620|NCOA7|135112|nuclear receptor coactivator 7##AK307395|NCOA7|135112|nuclear receptor coactivator 7##BC137094|NCOA7|135112|nuclear receptor coactivator 7##BC137095|NCOA7|135112|nuclear receptor coactivator 7##NM_001122842|NCOA7|135112|nuclear receptor coactivator 7##NM_001199621|NCOA7|135112|nuclear receptor coactivator 7##NM_181782|NCOA7|135112|nuclear receptor coactivator 7##BC036461|NCOA7|135112|nuclear receptor coactivator 7##AK127512|NCOA7|135112|nuclear receptor coactivator 7##AB074157|NCOA7|135112|nuclear receptor coactivator 7##AK294558|NCOA7|135112|nuclear receptor coactivator 7##BX537385|NCOA7|135112|nuclear receptor coactivator 7##AL832621|NCOA7|135112|nuclear receptor coactivator 7##AL832628|NCOA7|135112|nuclear receptor coactivator 7##AB074156|NCOA7|135112|nuclear receptor coactivator 7	0.79727	CTCF.p2:26:0.797
chr1	120491380	120491488	reg1006986.p1	11.655	+	U77493 TSC_hg19_v1_chr1_-_120484245	-7195	-	BC028372 AY358734 AK292483 NM_021794	-52303	-	NM_001047980	-103656	-	AF308601 TSC_hg19_v1_chr1_-_120612027 AF315356	120595	-	TSC_hg19_v1_chr1_-_120612211 AK307843	120772	-	TSC_hg19_v1_chr1_-_120612272 BC071562	120832	-	U77493|NOTCH2|4853|notch 2##BC028372|ADAM30|11085|ADAM metallopeptidase domain 30##AY358734|ADAM30|11085|ADAM metallopeptidase domain 30##AK292483|ADAM30|11085|ADAM metallopeptidase domain 30##NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30##NM_001047980|NBPF7|343505|neuroblastoma breakpoint family, member 7##AF308601|NOTCH2|4853|notch 2##AF315356|NOTCH2|4853|notch 2##AK307843|NOTCH2|4853|notch 2##BC071562|NOTCH2|4853|notch 2	0.347342	CTCF.p2:-1:0.347
chr20	39878526	39878647	reg1007797.p2	11.655	+	TSC_hg19_v1_chr20_-_39766625 BC035080	-111978	-	TSC_hg19_v1_chr20_+_39766146 NM_002660 NM_182811 BC136466 BC144136 M34667	-112398	+	TSC_hg19_v1_chr20_+_39765861 AB210028	-112724	+	AK122905 AK097523 AB081948 BC047070 AK292415 NM_015035	50137	-	TSC_hg19_v1_chr20_-_39946149 AB007855	67629	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	90929	+	NM_002660|PLCG1|5335|phospholipase C, gamma 1##NM_182811|PLCG1|5335|phospholipase C, gamma 1##BC136466|PLCG1|5335|phospholipase C, gamma 1##BC144136|PLCG1|5335|phospholipase C, gamma 1##M34667|PLCG1|5335|phospholipase C, gamma 1##AB210028|PLCG1|5335|phospholipase C, gamma 1##AK122905|ZHX3|23051|zinc fingers and homeoboxes 3##AK097523|ZHX3|23051|zinc fingers and homeoboxes 3##AB081948|ZHX3|23051|zinc fingers and homeoboxes 3##BC047070|ZHX3|23051|zinc fingers and homeoboxes 3##AK292415|ZHX3|23051|zinc fingers and homeoboxes 3##NM_015035|ZHX3|23051|zinc fingers and homeoboxes 3##AB007855|ZHX3|23051|zinc fingers and homeoboxes 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3	0.177749	
chr2	68349632	68349769	reg1009543.p1	11.655	+	NM_001190263 NM_001190265 NM_006333 NM_173177 TSC_hg19_v1_chr2_-_68290160	-59540	-	BC016284 TSC_hg19_v1_chr2_-_68290140 X95592 BC009584 BC009589 BC005235 AK290451	-59566	-	TSC_hg19_v1_chr2_+_67624467 NM_019002 AJ242682 BC033075 BC040001	-725218	+	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	34934	-	TSC_hg19_v1_chr2_+_68384999 BC008304 NM_020143 AK291715 AF349314 AF164799 AK313204 AK223118 L48692 AK225641 BC018152	35397	+	TSC_hg19_v1_chr2_-_68479665 AK307136 AK314893 BC027913 NM_000945	129895	-	NM_001190263|C1D|10438|C1D nuclear receptor corepressor##NM_001190265|C1D|10438|C1D nuclear receptor corepressor##NM_006333|C1D|10438|C1D nuclear receptor corepressor##NM_173177|C1D|10438|C1D nuclear receptor corepressor##BC016284|C1D|10438|C1D nuclear receptor corepressor##X95592|C1D|10438|C1D nuclear receptor corepressor##BC009584|C1D|10438|C1D nuclear receptor corepressor##BC009589|C1D|10438|C1D nuclear receptor corepressor##BC005235|C1D|10438|C1D nuclear receptor corepressor##AK290451|C1D|10438|C1D nuclear receptor corepressor##NM_019002|ETAA1|54465|Ewing tumor-associated antigen 1##AJ242682|ETAA1|54465|Ewing tumor-associated antigen 1##BC033075|ETAA1|54465|Ewing tumor-associated antigen 1##BC040001|ETAA1|54465|Ewing tumor-associated antigen 1##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92##BC008304|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_020143|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK291715|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF349314|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF164799|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK313204|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK223118|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK225641|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##BC018152|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha	0.99531	CTCF.p2:0:0.995
chr3	128689241	128689372	reg1008445.p1	11.655	+	TSC_hg19_v1_chr3_+_128598520 CU680574 DQ893516 DQ896495	-90772	+	TSC_hg19_v1_chr3_+_128598499 AK294597 AF327351	-90800	+	TSC_hg19_v1_chr3_+_128598471 BC013354 AB209427 AK022568 AK024012	-90823	+	AK056377 BC038736 TSC_hg19_v1_chr3_-_128712920 AB033083 NM_020741	23645	-	NM_024768	31165	+	X52997 BC030229 NM_000174	90320	+	DQ893516|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##DQ896495|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK294597|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AF327351|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##BC013354|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AB209427|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK022568|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK024012|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK056377|KIAA1257|57501|KIAA1257##BC038736|KIAA1257|57501|KIAA1257##AB033083|KIAA1257|57501|KIAA1257##NM_020741|KIAA1257|57501|KIAA1257##NM_024768|CCDC48|79825|coiled-coil domain containing 48##X52997|GP9|2815|glycoprotein IX (platelet)##BC030229|GP9|2815|glycoprotein IX (platelet)##NM_000174|GP9|2815|glycoprotein IX (platelet)	0.964395	CTCF.p2:-13:0.964
chr5	95228610	95228740	reg1009159.p1	11.655	+	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	-70155	-	AF162769 BT006689 CR450312 CR542165 DQ892497 DQ895709 CU679866 D21238 AF069668 BC106075 X76648 TSC_hg19_v1_chr5_-_95158431 AK311868 BC005304 BC010965	-70275	-	TSC_hg19_v1_chr5_+_95067531 CU691986 AB385392	-161139	+	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	68823	-	TSC_hg19_v1_chr5_-_95297609 BC028412 NM_012081	69010	-	AK308575 NM_001177876	520013	-	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##AF162769|GLRX|2745|glutaredoxin (thioltransferase)##BT006689|GLRX|2745|glutaredoxin (thioltransferase)##CR450312|GLRX|2745|glutaredoxin (thioltransferase)##CR542165|GLRX|2745|glutaredoxin (thioltransferase)##DQ892497|GLRX|2745|glutaredoxin (thioltransferase)##DQ895709|GLRX|2745|glutaredoxin (thioltransferase)##D21238|GLRX|2745|glutaredoxin (thioltransferase)##AF069668|GLRX|2745|glutaredoxin (thioltransferase)##BC106075|GLRX|2745|glutaredoxin (thioltransferase)##X76648|GLRX|2745|glutaredoxin (thioltransferase)##AK311868|GLRX|2745|glutaredoxin (thioltransferase)##BC005304|GLRX|2745|glutaredoxin (thioltransferase)##BC010965|GLRX|2745|glutaredoxin (thioltransferase)##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2##BC028412|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_012081|ELL2|22936|elongation factor, RNA polymerase II, 2##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1	0.893282	CTCF.p2:-3:0.893
chr5	139145382	139145520	reg1005450.p2	11.654	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	-85059	+	AF151029 TSC_hg19_v1_chr5_+_139060229	-85239	+	BC002490 TSC_hg19_v1_chr5_+_139060088 AB463548 GQ379202 AK314420	-85367	+	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	29955	+	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	277277	-	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	277394	-	DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##BC002490|CXXC5|51523|CXXC finger protein 5##GQ379202|CXXC5|51523|CXXC finger protein 5##AK314420|CXXC5|51523|CXXC finger protein 5##AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2	0.997475	CTCF.p2:11:0.997
chr17	16290056	16290194	reg1007498.p2	11.652	+	AK129498 BC015127 BC026301 BC031027 BC038999 TSC_hg19_v1_chr17_+_16284408 BC046123 BC009301	-5711	+	TSC_hg19_v1_chr17_+_16284404 AK300882	-5723	+	TSC_hg19_v1_chr17_+_16284371 BC000379 NM_018955	-5761	+	TSC_hg19_v1_chr17_+_16318881 AK289705 NM_016113 BC018926 BC051305	28748	+	TSC_hg19_v1_chr17_+_16318917 AK001896	28793	+	TSC_hg19_v1_chr17_+_16319096 AF103906	28980	+	AK129498|UBB|7314|ubiquitin B##BC015127|UBB|7314|ubiquitin B##BC026301|UBB|7314|ubiquitin B##BC031027|UBB|7314|ubiquitin B##BC038999|UBB|7314|ubiquitin B##BC046123|UBB|7314|ubiquitin B##BC009301|UBB|7314|ubiquitin B##AK300882|UBB|7314|ubiquitin B##BC000379|UBB|7314|ubiquitin B##NM_018955|UBB|7314|ubiquitin B##AK289705|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##NM_016113|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##BC018926|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##BC051305|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AK001896|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AF103906|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2	0.93935	CTCF.p2:3:0.939
chr17	49841870	49841984	reg1009042.p1	11.652	+	AF151806 TSC_hg19_v1_chr17_+_49337913 AK314399 BC025276 BC001535	-504002	+	TSC_hg19_v1_chr17_+_49337906 NM_016001	-504028	+	TSC_hg19_v1_chr17_+_49337888 AK026355	-504041	+	TSC_hg19_v1_chr17_-_50235676 AK294652 AK313001	393761	-	TSC_hg19_v1_chr17_-_50236075 BC047456 BC068462	394113	-	CR936674 TSC_hg19_v1_chr17_-_50236127 NM_020178	394211	-	AF151806|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK314399|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC025276|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC001535|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##NM_016001|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK026355|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK294652|CA10|56934|carbonic anhydrase X##AK313001|CA10|56934|carbonic anhydrase X##BC047456|CA10|56934|carbonic anhydrase X##BC068462|CA10|56934|carbonic anhydrase X##NM_020178|CA10|56934|carbonic anhydrase X	0.988442	CTCF.p2:-5:0.988
chr3	67840607	67840718	reg1007629.p1	11.652	+	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	-135512	+	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	-135600	-	NM_032505 AK096640 AK300397	-791934	+	AY325114 NM_001252216	200071	+	NM_213609 AK289668 AK290446 BC025746	212743	+	BC031566 TSC_hg19_v1_chr3_-_68981699 AY325117 NM_001005527 NM_182522	1141055	-	BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AY325114|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##NM_001252216|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##NM_213609|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AK289668|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AK290446|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##BC025746|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##BC031566|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##AY325117|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##NM_001005527|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##NM_182522|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4	0.0	
chrX	47382887	47383011	reg1007648.p2	11.652	+	BC015023 NM_007130 NM_153380	-40605	-	U28687 NM_003446 BC075003 AB528013 EU446919	-152926	+	TSC_hg19_v1_chrX_+_47092422 AK055588 AK098394 BC073960 BC063668 AB073597 BC000350 AB385092 U44839 AK294635	-290484	+	NM_001654 X04790 TSC_hg19_v1_chrX_+_47420605 AB208831 AK300975 AK130043 AK297453 AK307747 BC002466 BC007514	37618	+	TSC_hg19_v1_chrX_+_47441773 NM_003254 AK074854 AK296116 BC000866 BC007097	58774	+	TSC_hg19_v1_chrX_+_47441834 X03124 M12670 AK310206 AK311937 AK307222 M59906 X02598	58874	+	BC015023|ZNF41|7592|zinc finger protein 41##NM_007130|ZNF41|7592|zinc finger protein 41##NM_153380|ZNF41|7592|zinc finger protein 41##U28687|ZNF157|7712|zinc finger protein 157##NM_003446|ZNF157|7712|zinc finger protein 157##BC075003|ZNF157|7712|zinc finger protein 157##EU446919|ZNF157|7712|zinc finger protein 157##AK055588|USP11|8237|ubiquitin specific peptidase 11##AK098394|USP11|8237|ubiquitin specific peptidase 11##BC073960|USP11|8237|ubiquitin specific peptidase 11##BC063668|USP11|8237|ubiquitin specific peptidase 11##AB073597|USP11|8237|ubiquitin specific peptidase 11##BC000350|USP11|8237|ubiquitin specific peptidase 11##U44839|USP11|8237|ubiquitin specific peptidase 11##AK294635|USP11|8237|ubiquitin specific peptidase 11##NM_001654|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##X04790|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AB208831|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK300975|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK130043|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK297453|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK307747|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC002466|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC007514|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##NM_003254|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK074854|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK296116|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC000866|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC007097|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X03124|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M12670|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK310206|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK311937|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M59906|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X02598|TIMP1|7076|TIMP metallopeptidase inhibitor 1	0.46491	CTCF.p2:26:0.448
chr7	83605691	83605830	reg1008532.p1	11.651	+	NM_012431	-327282	-	AK303925 NM_001178129	-335014	-	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	-813524	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	218562	-	NM_152754	1145486	-	AK309116 TSC_hg19_v1_chr7_-_84816296	1210475	-	NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	0.978186	CTCF.p2:-17:0.978
chr10	91129407	91129508	reg1005791.p2	11.650	+	BC040833 AK091558 TSC_hg19_v1_chr10_-_91102477	-27002	-	NM_001031683 AK297137 AF026939 BC001383 BC004977	-37174	+	NM_001549 AK290427 AF083470 AK312675 U52513 TSC_hg19_v1_chr10_+_91087771	-41771	+	BX647300 NM_001010987 BC150189 BC137368 BC137369	8370	+	NM_001548 BC007091 AK314588 AK308688 X03557	22906	+	TSC_hg19_v1_chr10_+_91174324 NM_012420 BC025786	44886	+	AK091558|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##NM_001549|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK290427|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AF083470|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK312675|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##U52513|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BX647300|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##NM_001010987|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC150189|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC137368|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC137369|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##NM_001548|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##BC007091|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK314588|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK308688|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##X03557|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##NM_012420|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##BC025786|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	0.325529	CTCF.p2:-2:0.326
chr19	7744359	7744477	reg1007294.p2	11.649	+	TSC_hg19_v1_chr19_+_7741975 BC104796 BC104798 NM_174918 AF461156 BC035847	-2451	+	AF290874 AF323081 AY207314 BC069302 NM_001193374 NM_020415 TSC_hg19_v1_chr19_+_7733975 BC101554 BC101560 AF205952 AY359066	-10436	+	AB002559 U63533 TSC_hg19_v1_chr19_+_7702028 AK302257 AB464275 BT006915	-42391	+	NM_001042462 TSC_hg19_v1_chr19_+_7745726 AK292001	1299	+	TSC_hg19_v1_chr19_+_7745742 BC042161 NM_174894 NM_001042461 BC022836	1337	+	TSC_hg19_v1_chr19_-_7764328 NM_001207019	19908	-	BC104796|C19orf59|199675|chromosome 19 open reading frame 59##BC104798|C19orf59|199675|chromosome 19 open reading frame 59##NM_174918|C19orf59|199675|chromosome 19 open reading frame 59##AF461156|C19orf59|199675|chromosome 19 open reading frame 59##BC035847|C19orf59|199675|chromosome 19 open reading frame 59##AF290874|RETN|56729|resistin##AF323081|RETN|56729|resistin##AY207314|RETN|56729|resistin##BC069302|RETN|56729|resistin##NM_001193374|RETN|56729|resistin##NM_020415|RETN|56729|resistin##BC101554|RETN|56729|resistin##BC101560|RETN|56729|resistin##AF205952|RETN|56729|resistin##AY359066|RETN|56729|resistin##AB002559|STXBP2|6813|syntaxin binding protein 2##U63533|STXBP2|6813|syntaxin binding protein 2##AK302257|STXBP2|6813|syntaxin binding protein 2##BT006915|STXBP2|6813|syntaxin binding protein 2##NM_001042462|TRAPPC5|126003|trafficking protein particle complex 5##AK292001|TRAPPC5|126003|trafficking protein particle complex 5##BC042161|TRAPPC5|126003|trafficking protein particle complex 5##NM_174894|TRAPPC5|126003|trafficking protein particle complex 5##NM_001042461|TRAPPC5|126003|trafficking protein particle complex 5##BC022836|TRAPPC5|126003|trafficking protein particle complex 5##NM_001207019|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)	0.917836	CTCF.p2:-10:0.918
chr4	10556388	10556504	reg1006497.p1	11.648	+	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-97436	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-437910	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-437968	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	129955	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	874086	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2929505	-	BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family	0.904107	CTCF.p2:-6:0.904
chr11	8008561	8008693	reg1008982.p1	11.647	+	AY154465 AY489192 NM_176821 BC104957	-23539	-	AB529269 NM_001003745 BC137031 BC137032	-47524	-	AB529270 NM_001004461	-58419	-	NM_003754 TSC_hg19_v1_chr11_+_8008883 AK095574 AK289637 AK297621 AK291354 AK293826 BC000490 U94855 BC073753 AB590115 BT006894 CR456959 CU674238 DQ890766	255	+	AK293528 TSC_hg19_v1_chr11_+_8040820	32178	+	NM_003320 U82467	51552	+	AY154465|NLRP10|338322|NLR family, pyrin domain containing 10##AY489192|NLRP10|338322|NLR family, pyrin domain containing 10##NM_176821|NLRP10|338322|NLR family, pyrin domain containing 10##BC104957|NLRP10|338322|NLR family, pyrin domain containing 10##NM_001003745|OR10A3|26496|olfactory receptor, family 10, subfamily A, member 3##BC137031|OR10A3|26496|olfactory receptor, family 10, subfamily A, member 3##BC137032|OR10A3|26496|olfactory receptor, family 10, subfamily A, member 3##NM_001004461|OR10A6|390093|olfactory receptor, family 10, subfamily A, member 6##NM_003754|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK095574|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK289637|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK297621|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK291354|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK293826|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##BC000490|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##U94855|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##BC073753|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##BT006894|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##CR456959|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##DQ890766|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK293528|TUB|7275|tubby homolog (mouse)##NM_003320|TUB|7275|tubby homolog (mouse)##U82467|TUB|7275|tubby homolog (mouse)	0.977522	CTCF.p2:-6:0.978
chr12	46547180	46547318	reg1006878.p1	11.647	+	TSC_hg19_v1_chr12_-_46385857 AK026473	-161374	-	TSC_hg19_v1_chr12_-_46384378 NM_004719	-162824	-	AK096682 TSC_hg19_v1_chr12_-_46384348 AF030234	-162902	-	AK074851 CU679761 DQ891017 EU176550 AK074949 AK313731 TSC_hg19_v1_chr12_-_46633674	86364	-	TSC_hg19_v1_chr12_-_46662567 AF247166	115317	-	TSC_hg19_v1_chr12_-_46662776 BC010620 BX648676	115494	-	AK026473|SCAF11|9169|SR-related CTD-associated factor 11##NM_004719|SCAF11|9169|SR-related CTD-associated factor 11##AK096682|SCAF11|9169|SR-related CTD-associated factor 11##AF030234|SCAF11|9169|SR-related CTD-associated factor 11##AK074851|SLC38A1|81539|solute carrier family 38, member 1##DQ891017|SLC38A1|81539|solute carrier family 38, member 1##EU176550|SLC38A1|81539|solute carrier family 38, member 1##AK074949|SLC38A1|81539|solute carrier family 38, member 1##AK313731|SLC38A1|81539|solute carrier family 38, member 1##AF247166|SLC38A1|81539|solute carrier family 38, member 1##BC010620|SLC38A1|81539|solute carrier family 38, member 1##BX648676|SLC38A1|81539|solute carrier family 38, member 1	0.050367	
chr2	25599702	25599853	reg1006520.p1	11.647	+	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	-34315	-	TSC_hg19_v1_chr2_-_25565353 AB208833	-34414	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	-34449	-	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	296624	-	AB385496 TSC_hg19_v1_chr2_-_26101159	501352	-	TSC_hg19_v1_chr2_-_26101174 AB084279	501396	-	BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)	1.003756	CTCF.p2:-13:0.994
chr7	76067333	76067447	reg1008880.p1	11.647	+	X56777 M60504 NM_001110354	-13129	+	BC113840 AK172783 AJ312755 NM_080744	-28438	-	TSC_hg19_v1_chr7_+_76026838 AK292763 NM_007155 BC113949	-40547	+	NM_001102594 NM_001102595 NM_020892 BC018555 DQ010329 AK293226 TSC_hg19_v1_chr7_+_76091025 AK023924 AB040961 BC008856 BC026059 BC093079	23637	+	AY225124 AY225125 CU679151 DQ893264 DQ896593 NM_001102596	42436	+	NM_030570 NM_182684 AK290096 AY233462 BC004304 AK056760 CU678662	72466	+	X56777|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##M60504|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_001110354|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##BC113840|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##AK172783|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##AJ312755|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##NM_080744|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##AK292763|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_007155|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##BC113949|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_001102594|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102595|DTX2|113878|deltex homolog 2 (Drosophila)##NM_020892|DTX2|113878|deltex homolog 2 (Drosophila)##BC018555|DTX2|113878|deltex homolog 2 (Drosophila)##DQ010329|DTX2|113878|deltex homolog 2 (Drosophila)##AK293226|DTX2|113878|deltex homolog 2 (Drosophila)##AK023924|DTX2|113878|deltex homolog 2 (Drosophila)##AB040961|DTX2|113878|deltex homolog 2 (Drosophila)##BC008856|DTX2|113878|deltex homolog 2 (Drosophila)##BC026059|DTX2|113878|deltex homolog 2 (Drosophila)##BC093079|DTX2|113878|deltex homolog 2 (Drosophila)##AY225124|DTX2|113878|deltex homolog 2 (Drosophila)##AY225125|DTX2|113878|deltex homolog 2 (Drosophila)##DQ893264|DTX2|113878|deltex homolog 2 (Drosophila)##DQ896593|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102596|DTX2|113878|deltex homolog 2 (Drosophila)##NM_030570|UPK3B|80761|uroplakin 3B##NM_182684|UPK3B|80761|uroplakin 3B##AK290096|UPK3B|80761|uroplakin 3B##AY233462|UPK3B|80761|uroplakin 3B##BC004304|UPK3B|80761|uroplakin 3B##AK056760|UPK3B|80761|uroplakin 3B	0.908856	CTCF.p2:-15:0.848
chr8	25027763	25027912	reg1010209.p1	11.647	+	AY156690 CU688222 CU691684 AB463926 DQ892646 DQ895884 AK075003 AK127430 AK225975 AK299095 AK314591 BC039237 BC066952 TSC_hg19_v1_chr8_-_24814127 AK057731 NM_006158	-213757	-	TSC_hg19_v1_chr8_+_24774588 AF181990	-253204	+	NM_001105541 AK294681	-255362	+	TSC_hg19_v1_chr8_+_25042229 BC015352	14320	+	TSC_hg19_v1_chr8_+_25042294 BC011877 NM_024940 AK123607	14440	+	BC137175 BC137176 TSC_hg19_v1_chr8_+_25042406	14563	+	AY156690|NEFL|4747|neurofilament, light polypeptide##DQ892646|NEFL|4747|neurofilament, light polypeptide##DQ895884|NEFL|4747|neurofilament, light polypeptide##AK075003|NEFL|4747|neurofilament, light polypeptide##AK127430|NEFL|4747|neurofilament, light polypeptide##AK225975|NEFL|4747|neurofilament, light polypeptide##AK299095|NEFL|4747|neurofilament, light polypeptide##AK314591|NEFL|4747|neurofilament, light polypeptide##BC039237|NEFL|4747|neurofilament, light polypeptide##BC066952|NEFL|4747|neurofilament, light polypeptide##AK057731|NEFL|4747|neurofilament, light polypeptide##NM_006158|NEFL|4747|neurofilament, light polypeptide##AF181990|NEFM|4741|neurofilament, medium polypeptide##NM_001105541|NEFM|4741|neurofilament, medium polypeptide##AK294681|NEFM|4741|neurofilament, medium polypeptide##BC015352|DOCK5|80005|dedicator of cytokinesis 5##BC011877|DOCK5|80005|dedicator of cytokinesis 5##NM_024940|DOCK5|80005|dedicator of cytokinesis 5##AK123607|DOCK5|80005|dedicator of cytokinesis 5##BC137175|DOCK5|80005|dedicator of cytokinesis 5##BC137176|DOCK5|80005|dedicator of cytokinesis 5	0.977337	CTCF.p2:27:0.977
chr12	14876791	14876907	reg1007054.p1	11.646	+	BC136544 BC136545 M73489 TSC_hg19_v1_chr12_-_14849534 S57551 AK310034 NM_004963	-27364	-	NM_024829 TSC_hg19_v1_chr12_-_14720806	-156045	-	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	-156240	-	AB527963 TSC_hg19_v1_chr12_-_14924064 AK311916 BC020884 NM_175054	47192	-	NM_177925 TSC_hg19_v1_chr12_+_14927302	50436	+	TSC_hg19_v1_chr12_+_14927338 AK001765 AK303301 BC003602 CU678528 AL133626	50561	+	BC136544|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##BC136545|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##M73489|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##S57551|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##AK310034|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##NM_004963|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##NM_024829|PLBD1|79887|phospholipase B domain containing 1##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1##BC020884|HIST4H4|121504|histone cluster 4, H4##NM_175054|HIST4H4|121504|histone cluster 4, H4##NM_177925|H2AFJ|55766|H2A histone family, member J##AK001765|H2AFJ|55766|H2A histone family, member J##AK303301|H2AFJ|55766|H2A histone family, member J##BC003602|H2AFJ|55766|H2A histone family, member J##AL133626|H2AFJ|55766|H2A histone family, member J	0.838878	CTCF.p2:-36:0.839
chr7	104488953	104489099	reg1010075.p1	11.646	+	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-519808	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-640595	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-859030	-	TSC_hg19_v1_chr7_-_104567089 BC050337	78064	-	TSC_hg19_v1_chr7_-_104653491 AK124046	164456	-	TSC_hg19_v1_chr7_-_104654062 AK094372	165048	-	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##BC050337|LOC723809|723809|uncharacterized LOC723809##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545	0.573349	CTCF.p2:8:0.573
chr8	86059786	86059912	reg1008317.p1	11.646	+	TSC_hg19_v1_chr8_+_86019442 BC030701 BC070092 AK056185 AK300874 AK302648 AK307350 AK307636 AK307443	-40380	+	AK300234 NM_033402 TSC_hg19_v1_chr8_+_86019350	-40502	+	NM_001100391 BC031090	-962745	+	NM_001083588 NM_001951 U31556 TSC_hg19_v1_chr8_+_86089622 Z78409 X86097	29772	+	TSC_hg19_v1_chr8_+_86089641 AB590542	29797	+	NM_001083589	40060	+	BC030701|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC070092|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK056185|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK300874|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK302648|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307350|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307636|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307443|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK300234|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_033402|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_001100391|RALYL|138046|RALY RNA binding protein-like##BC031090|RALYL|138046|RALY RNA binding protein-like##NM_001083588|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001951|E2F5|1875|E2F transcription factor 5, p130-binding##U31556|E2F5|1875|E2F transcription factor 5, p130-binding##Z78409|E2F5|1875|E2F transcription factor 5, p130-binding##X86097|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001083589|E2F5|1875|E2F transcription factor 5, p130-binding	0.405676	CTCF.p2:-12:0.406
chr12	2893284	2893415	reg1009736.p1	11.644	+	AB209016 AJ224873 AY830711 AY830712 AY830713 Z34809 Z34810 Z34811 Z34812 Z34813 Z34814 Z34815 Z34816 Z34817 Z34818 Z34819 Z34820 Z34821 Z34822 Z74996 TSC_hg19_v1_chr12_+_2162753	-730621	+	TSC_hg19_v1_chr12_+_2162452 NM_000719 NM_001129827 NM_001129829 NM_001129830 NM_001129831 NM_001129832 NM_001129833 NM_001129834 NM_001129835 NM_001129836 NM_001129837 NM_001129838 NM_001129839 NM_001129840 NM_001129841 NM_001129842 NM_001129843 NM_001129844 NM_001129846 NM_001167623 NM_001167624 NM_001167625 NM_199460 AK309111 AF465484 AK308652 BC146846	-730855	+	TSC_hg19_v1_chr12_-_2113622 AB463561 AK301109 AK056200 AK299203 BC043437 AY146652 NM_152640	-779678	-	TSC_hg19_v1_chr12_+_2904161 NM_002014 AK313918 BC001786 M88279 BC007924	10805	+	TSC_hg19_v1_chr12_+_2904310 AB385011 CU674888 DQ893668 DQ895800	10953	+	NM_018463 TSC_hg19_v1_chr12_+_2921842 AK130319 AK297189 AK291110 AK300905 AK027483 BC006552 BC013399 DQ892711 DQ895963 CU675449 AY599883	28507	+	AB209016|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AJ224873|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830711|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830712|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830713|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34809|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34810|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34811|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34812|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34813|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34814|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34815|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34816|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34817|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34818|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34819|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34820|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34821|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34822|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z74996|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK301109|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK056200|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK299203|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC043437|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AY146652|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_152640|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_002014|FKBP4|2288|FK506 binding protein 4, 59kDa##AK313918|FKBP4|2288|FK506 binding protein 4, 59kDa##BC001786|FKBP4|2288|FK506 binding protein 4, 59kDa##M88279|FKBP4|2288|FK506 binding protein 4, 59kDa##BC007924|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ893668|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ895800|FKBP4|2288|FK506 binding protein 4, 59kDa##NM_018463|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK130319|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK297189|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK291110|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK300905|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK027483|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC006552|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC013399|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ892711|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ895963|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AY599883|ITFG2|55846|integrin alpha FG-GAP repeat containing 2	0.997785	CTCF.p2:5:0.998
chr17	36313813	36313936	reg1008590.p1	11.644	+	NM_001123391 NM_032258 AK313329 AK302064 BC078140 BC071680 AK301823 AL136860 BC047739	-29881	+	TSC_hg19_v1_chr17_-_36105051 HM116553 HM116554 HM116555 HM116556 AK290131 AK296633 AK298393 BC017714 X58840 NM_000458 NM_001165923	-208823	-	AB528419 BT007126 CR536572 DQ891528 EU176615 TSC_hg19_v1_chr17_-_36104898	-208988	-	BC033670 BC047739 AL136860 AK301823 BC071680 BC078140 AK302064 AK313329 NM_001123391 NM_032258	34751	-	BC067792 TSC_hg19_v1_chr17_-_36413224	99363	-	NM_032351 AK293605 BC130382 BC130384 TSC_hg19_v1_chr17_+_36453120	139180	+	NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##AK313329|TBC1D3|729873|TBC1 domain family, member 3##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##HM116553|HNF1B|6928|HNF1 homeobox B##HM116554|HNF1B|6928|HNF1 homeobox B##HM116555|HNF1B|6928|HNF1 homeobox B##HM116556|HNF1B|6928|HNF1 homeobox B##AK290131|HNF1B|6928|HNF1 homeobox B##AK296633|HNF1B|6928|HNF1 homeobox B##AK298393|HNF1B|6928|HNF1 homeobox B##BC017714|HNF1B|6928|HNF1 homeobox B##X58840|HNF1B|6928|HNF1 homeobox B##NM_000458|HNF1B|6928|HNF1 homeobox B##NM_001165923|HNF1B|6928|HNF1 homeobox B##BT007126|HNF1B|6928|HNF1 homeobox B##CR536572|HNF1B|6928|HNF1 homeobox B##DQ891528|HNF1B|6928|HNF1 homeobox B##EU176615|HNF1B|6928|HNF1 homeobox B##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##AK302064|TBC1D3|729873|TBC1 domain family, member 3##AK313329|TBC1D3|729873|TBC1 domain family, member 3##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##BC067792|LOC440434|440434|aminopeptidase puromycin sensitive pseudogene##NM_032351|MRPL45|84311|mitochondrial ribosomal protein L45##AK293605|MRPL45|84311|mitochondrial ribosomal protein L45##BC130382|MRPL45|84311|mitochondrial ribosomal protein L45##BC130384|MRPL45|84311|mitochondrial ribosomal protein L45	0.025199	
chr19	51925314	51925434	reg1009152.p1	11.643	+	TSC_hg19_v1_chr19_-_51920897 AK289900 AF310233 AY358337 AK290542 AK294185 AK303514 AK303717 BC101725 BC143497 BC143500 AF301007 AK292025 AK308982 AY032685 AF311905 NM_001171156 NM_001171157 NM_001171158 NM_001171159 NM_001171160 NM_001171161 NM_033130	-4426	-	TSC_hg19_v1_chr19_-_51893838 BC085012 BC143997 BC043532 NM_001193623	-31549	-	BC074916 BC074917 BC126139 AF340019 BC069430 AF340020 NM_001161748 NM_030657	-34177	-	AF310234 AK290412 AF195092 AF223403 BC053319 AK290149 AK295589 NM_014442	36303	-	NM_001080405	54463	+	NM_033329	78272	-	AK289900|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF310233|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY358337|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK290542|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK294185|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303514|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303717|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC101725|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143497|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143500|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF301007|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK292025|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK308982|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY032685|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF311905|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171156|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171157|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171158|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171159|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171160|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171161|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_033130|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC085012|LOC147646|147646|uncharacterized LOC147646##BC043532|LOC147646|147646|uncharacterized LOC147646##NM_001193623|LOC147646|147646|uncharacterized LOC147646##BC074916|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC074917|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC126139|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340019|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC069430|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340020|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_001161748|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_030657|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF310234|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290412|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF195092|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF223403|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##BC053319|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290149|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK295589|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_014442|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_001080405|CEACAM18|729767|carcinoembryonic antigen-related cell adhesion molecule 18##NM_033329|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)	0.913689	CTCF.p2:-19:0.914
chr11	27720612	27720747	reg1009928.p1	11.640	+	EF689009 EF689010 NM_001143816 NM_170735	-39484	-	TSC_hg19_v1_chr11_+_27528395 AY054401 AY054402 AY054404 AY513486	-192290	+	AB385247 BC053907 TSC_hg19_v1_chr11_-_27528315 BC009774 AK223156 AL833601 AK002077 NM_018362	-192367	-	AB038674 AY054399 AY054400 EF689017 EF689018 NM_170734	517	-	AY054398 X60201 X91251 TSC_hg19_v1_chr11_-_27722003 EF689014 EF689015 EF689016 NM_001143813 NM_001143814 NM_001709	1325	-	EF689013 NM_001143812	1767	-	EF689009|BDNF|627|brain-derived neurotrophic factor##EF689010|BDNF|627|brain-derived neurotrophic factor##NM_001143816|BDNF|627|brain-derived neurotrophic factor##NM_170735|BDNF|627|brain-derived neurotrophic factor##AY054401|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY054402|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY054404|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY513486|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)##BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)##AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)##AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)##AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)##NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)##AB038674|BDNF|627|brain-derived neurotrophic factor##AY054399|BDNF|627|brain-derived neurotrophic factor##AY054400|BDNF|627|brain-derived neurotrophic factor##EF689017|BDNF|627|brain-derived neurotrophic factor##EF689018|BDNF|627|brain-derived neurotrophic factor##NM_170734|BDNF|627|brain-derived neurotrophic factor##AY054398|BDNF|627|brain-derived neurotrophic factor##X60201|BDNF|627|brain-derived neurotrophic factor##X91251|BDNF|627|brain-derived neurotrophic factor##EF689014|BDNF|627|brain-derived neurotrophic factor##EF689015|BDNF|627|brain-derived neurotrophic factor##EF689016|BDNF|627|brain-derived neurotrophic factor##NM_001143813|BDNF|627|brain-derived neurotrophic factor##NM_001143814|BDNF|627|brain-derived neurotrophic factor##NM_001709|BDNF|627|brain-derived neurotrophic factor##EF689013|BDNF|627|brain-derived neurotrophic factor##NM_001143812|BDNF|627|brain-derived neurotrophic factor	0.998603	CTCF.p2:2:0.999
chr22	22307299	22307397	reg1006703.p1	11.640	+	TSC_hg19_v1_chr22_-_22307213 AK291628 NM_014634	-117	-	TSC_hg19_v1_chr22_-_22307191 BC071989 BC013798 D13640 BC105599	-149	-	TSC_hg19_v1_chr22_-_22221955 BC017832 NM_002745 NM_138957	-85378	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	29799	-	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	29838	-	TSC_hg19_v1_chr22_+_22385369 AF026922	78017	+	AK291628|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##NM_014634|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##BC071989|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##D13640|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##BC105599|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##BC017832|MAPK1|5594|mitogen-activated protein kinase 1##NM_002745|MAPK1|5594|mitogen-activated protein kinase 1##NM_138957|MAPK1|5594|mitogen-activated protein kinase 1##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta	1.010606	CTCF.p2:-18:0.999
chr15	45750225	45750392	reg1001430.p2	11.639	+	NM_032413 NM_197955 TSC_hg19_v1_chr15_+_45722808 AF228422 AK026298 BC021173 AB026707	-27511	+	NM_024063 TSC_hg19_v1_chr15_+_45694551 AK291457 AK023232 AK225463 BC051861 BC000981 AK022348	-55756	+	TSC_hg19_v1_chr15_-_45670958 NM_001482	-79341	-	BC026089 NM_013309 TSC_hg19_v1_chr15_-_45815017	64702	-	AF080470 NM_012388 TSC_hg19_v1_chr15_+_45879539 AK091740	129178	+	TSC_hg19_v1_chr15_+_45879576 AK057545 BC004819 AK315581 AB527698	129299	+	NM_032413|C15orf48|84419|chromosome 15 open reading frame 48##NM_197955|C15orf48|84419|chromosome 15 open reading frame 48##AF228422|C15orf48|84419|chromosome 15 open reading frame 48##AK026298|C15orf48|84419|chromosome 15 open reading frame 48##BC021173|C15orf48|84419|chromosome 15 open reading frame 48##AB026707|C15orf48|84419|chromosome 15 open reading frame 48##NM_024063|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK291457|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK023232|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK225463|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC051861|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC000981|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK022348|SPATA5L1|79029|spermatogenesis associated 5-like 1##NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC026089|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##NM_013309|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##AF080470|PLDN|26258|pallidin homolog (mouse)##NM_012388|PLDN|26258|pallidin homolog (mouse)##AK057545|PLDN|26258|pallidin homolog (mouse)##BC004819|PLDN|26258|pallidin homolog (mouse)##AK315581|PLDN|26258|pallidin homolog (mouse)	0.723679	CTCF.p2:10:0.724
chr2	190525888	190526018	reg1007768.p2	11.638	+	BC037733 TSC_hg19_v1_chr2_-_190445663	-80311	-	TSC_hg19_v1_chr2_-_190445522 DQ065759 NM_014585	-80422	-	AF171087 AF215636 AF226614 AF231121 AL136944 BC035893 TSC_hg19_v1_chr2_-_190445510 AK223236 AK292146 AK314827	-80464	-	NM_019048 AK000759 TSC_hg19_v1_chr2_+_190526184 BC001243	218	+	TSC_hg19_v1_chr2_+_190539326 BC037215 AK307328 BC047413	13407	+	AK126073 NM_144708	14757	+	BC037733|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##DQ065759|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##NM_014585|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF171087|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF215636|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF226614|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF231121|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AL136944|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##BC035893|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK223236|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK292146|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK314827|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##NM_019048|ASNSD1|54529|asparagine synthetase domain containing 1##AK000759|ASNSD1|54529|asparagine synthetase domain containing 1##BC001243|ASNSD1|54529|asparagine synthetase domain containing 1##BC037215|ANKAR|150709|ankyrin and armadillo repeat containing##AK307328|ANKAR|150709|ankyrin and armadillo repeat containing##BC047413|ANKAR|150709|ankyrin and armadillo repeat containing##AK126073|ANKAR|150709|ankyrin and armadillo repeat containing##NM_144708|ANKAR|150709|ankyrin and armadillo repeat containing	1.74486	CTCF.p2:-37:0.907	CTCF.p2:41:0.838
chr7	34863399	34863524	reg1007465.p1	11.638	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	-165542	+	AK289963 NM_133468 AK096150 BC060868	-918319	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-1694380	+	DQ287932 NM_015283	214191	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	362331	-	TSC_hg19_v1_chr7_-_35293701 NM_001077653 NM_001166220 DQ986374	430269	-	AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##NM_001077653|TBX20|57057|T-box 20##NM_001166220|TBX20|57057|T-box 20##DQ986374|TBX20|57057|T-box 20	0.01182	
chr11	61284499	61284633	reg1008331.p1	11.637	+	NM_001145077	-8295	+	NM_001170753 NM_145017 TSC_hg19_v1_chr11_+_61248591 AK057333 BC043246 JF442033	-35948	+	TSC_hg19_v1_chr11_+_61197595 BX648946 AK000494 NM_017841 BC002331	-86972	+	TSC_hg19_v1_chr11_-_61348549 BC125170 BC125171 NM_001252065 NM_004200	63961	-	TSC_hg19_v1_chr11_+_61447896 BC150176 BC150195 NM_006133 AB014559 BC152453	163315	+	TSC_hg19_v1_chr11_+_61520107 AB023171 NM_001127392 AB385408	235541	+	NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B##NM_001170753|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##NM_145017|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##AK057333|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##BC043246|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##JF442033|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##AK000494|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##NM_017841|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##BC002331|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##BC125170|SYT7|9066|synaptotagmin VII##BC125171|SYT7|9066|synaptotagmin VII##NM_001252065|SYT7|9066|synaptotagmin VII##NM_004200|SYT7|9066|synaptotagmin VII##BC150176|DAGLA|747|diacylglycerol lipase, alpha##BC150195|DAGLA|747|diacylglycerol lipase, alpha##NM_006133|DAGLA|747|diacylglycerol lipase, alpha##AB014559|DAGLA|747|diacylglycerol lipase, alpha##BC152453|DAGLA|747|diacylglycerol lipase, alpha##AB023171|C11orf9|745|chromosome 11 open reading frame 9##NM_001127392|C11orf9|745|chromosome 11 open reading frame 9	0.996597	CTCF.p2:14:0.997
chr12	125887879	125888012	reg1007353.p1	11.637	+	NM_052907	-76784	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-337877	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-338004	+	NM_001136103	2864002	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	3420498	-	BC043528 TSC_hg19_v1_chr12_+_129337985	3450039	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.999708	CTCF.p2:-2:1.000
chr21	34733662	34733817	reg1005850.p2	11.637	+	AK222770 AK222812 AK312631 TSC_hg19_v1_chr21_+_34697277 BC021825 J03171 BC002590 AB528746 CU692410 DQ891323 DQ894507	-36421	+	TSC_hg19_v1_chr21_+_34697236 NM_000629	-36521	+	TSC_hg19_v1_chr21_+_34638753 AK299961 AB590138 DQ892552 DQ895763 BT009777	-94985	+	TSC_hg19_v1_chr21_+_34775192 NM_005534 U05875	41457	+	TSC_hg19_v1_chr21_+_34775735 BC003624 U05877	41993	+	AK314005 TSC_hg19_v1_chr21_+_34775746 AK292246	42009	+	AK222770|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK222812|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK312631|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC021825|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##J03171|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC002590|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ891323|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ894507|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##NM_000629|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK299961|IL10RB|3588|interleukin 10 receptor, beta##DQ892552|IL10RB|3588|interleukin 10 receptor, beta##DQ895763|IL10RB|3588|interleukin 10 receptor, beta##BT009777|IL10RB|3588|interleukin 10 receptor, beta##NM_005534|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05875|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##BC003624|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05877|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK314005|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK292246|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)	0.993715	CTCF.p2:-11:0.994
chr8	54721436	54721562	reg1008610.p1	11.637	+	BC099912 AK310407 AY168006 NM_000912 AY466378	-557287	-	BC069117 BC107101 NM_005285	-869032	+	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	-1094486	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	34180	-	AK022345 TSC_hg19_v1_chr8_-_54755834	34328	-	AF113222 TSC_hg19_v1_chr8_-_54755840 NM_015941 NM_213619 AK303229	34353	-	BC099912|OPRK1|4986|opioid receptor, kappa 1##AK310407|OPRK1|4986|opioid receptor, kappa 1##AY168006|OPRK1|4986|opioid receptor, kappa 1##NM_000912|OPRK1|4986|opioid receptor, kappa 1##AY466378|OPRK1|4986|opioid receptor, kappa 1##BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF113222|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_015941|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213619|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK303229|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H	0.710187	CTCF.p2:3:0.710
chr11	65308454	65308588	reg1006992.p4	11.636	+	TSC_hg19_v1_chr11_+_65292576 AF297709 BC069233 AK314945 AK302198 AB047077 AB051427 AB051428	-15921	+	TSC_hg19_v1_chr11_+_65292533 NM_001048218 NM_020680	-15984	+	TSC_hg19_v1_chr11_+_65271764 AF001540	-37011	+	TSC_hg19_v1_chr11_-_65314049 AK090750	5588	-	TSC_hg19_v1_chr11_-_65325391 AF135960 BC136277	16928	-	TSC_hg19_v1_chr11_-_65325673 AK024477 NM_001130144 NM_001164266 NM_021070	17347	-	AF297709|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##BC069233|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK314945|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK302198|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB047077|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB051427|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB051428|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##NM_001048218|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##NM_020680|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK090750|LTBP3|4054|latent transforming growth factor beta binding protein 3##AF135960|LTBP3|4054|latent transforming growth factor beta binding protein 3##BC136277|LTBP3|4054|latent transforming growth factor beta binding protein 3##AK024477|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_001130144|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_001164266|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_021070|LTBP3|4054|latent transforming growth factor beta binding protein 3	0.324747	CTCF.p2:0:0.325
chr2	237478311	237478481	reg1008108.p1	11.636	+	BC043504 NM_024726 AK294105 BC028699	-62264	-	NM_212556 BX647589	-305402	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-401764	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	32	+	BC036499 NM_006710 NM_198189	515622	+	TSC_hg19_v1_chr2_-_237994424 AK056246	516041	-	BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037	0.942747	CTCF.p2:11:0.930
chr7	22768172	22768307	reg1009699.p1	11.636	+	TSC_hg19_v1_chr7_+_22767104 X04403	-1121	+	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	-1416	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	-228392	-	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	94204	-	AB030241 AK056319 AK297399 TSC_hg19_v1_chr7_-_23053708 AL833296	285456	-	TSC_hg19_v1_chr7_-_23053750 BC018710 NM_032581	285511	-	X04403|IL6|3569|interleukin 6 (interferon, beta 2)##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AB030241|FAM126A|84668|family with sequence similarity 126, member A##AK056319|FAM126A|84668|family with sequence similarity 126, member A##AK297399|FAM126A|84668|family with sequence similarity 126, member A##AL833296|FAM126A|84668|family with sequence similarity 126, member A##BC018710|FAM126A|84668|family with sequence similarity 126, member A##NM_032581|FAM126A|84668|family with sequence similarity 126, member A	0.0	
chr1	244462859	244463014	reg1010501.p1	11.635	+	TSC_hg19_v1_chr1_+_244217286 AK310634	-245641	+	BC078175 AJ001388 NM_006352	-246393	+	TSC_hg19_v1_chr1_+_244214584 AK291408 AK293892 BC036677	-248353	+	BC054479 NM_001012970	53000	+	CU680302 EU831433 EU831525 TSC_hg19_v1_chr1_-_244615212 AK025514 AK303886 BC012356	152240	-	TSC_hg19_v1_chr1_-_244615392 AK308749 NM_001126	152402	-	BC078175|ZNF238|10472|zinc finger protein 238##AJ001388|ZNF238|10472|zinc finger protein 238##NM_006352|ZNF238|10472|zinc finger protein 238##AK291408|ZNF238|10472|zinc finger protein 238##AK293892|ZNF238|10472|zinc finger protein 238##BC036677|ZNF238|10472|zinc finger protein 238##BC054479|C1orf100|200159|chromosome 1 open reading frame 100##NM_001012970|C1orf100|200159|chromosome 1 open reading frame 100##EU831433|ADSS|159|adenylosuccinate synthase##EU831525|ADSS|159|adenylosuccinate synthase##AK025514|ADSS|159|adenylosuccinate synthase##AK303886|ADSS|159|adenylosuccinate synthase##BC012356|ADSS|159|adenylosuccinate synthase##AK308749|ADSS|159|adenylosuccinate synthase##NM_001126|ADSS|159|adenylosuccinate synthase	0.997989	CTCF.p2:3:0.998
chr15	93352440	93352578	reg1007412.p1	11.635	+	BC110328 TSC_hg19_v1_chr15_-_93277463	-75120	-	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	-153630	-	AK057393 NM_153040	-337603	+	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	90977	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	91071	+	AK295909 TSC_hg19_v1_chr15_+_93447798	95251	+	BC110328|FAM174B|400451|family with sequence similarity 174, member B##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2##AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2	0.994594	CTCF.p2:-11:0.995
chr18	616496	616621	reg1009868.p1	11.635	+	BC025381 NM_014410 AK299319	-19549	+	BC029515 NM_004066 U03270 AK312047 CU688680 DQ890970 DQ894144	-36176	+	AB005145 TSC_hg19_v1_chr18_-_500702 BC060789 AB038518 NM_130386	-115874	-	DQ980621 NM_199167 AF395889 D63813	137	+	TSC_hg19_v1_chr18_+_657615 NM_001071 BC083512 AK223372 BC013919	40988	+	AB062290 TSC_hg19_v1_chr18_+_657656 AK314140 X02308	41090	+	BC025381|CLUL1|27098|clusterin-like 1 (retinal)##NM_014410|CLUL1|27098|clusterin-like 1 (retinal)##AK299319|CLUL1|27098|clusterin-like 1 (retinal)##BC029515|CETN1|1068|centrin, EF-hand protein, 1##NM_004066|CETN1|1068|centrin, EF-hand protein, 1##U03270|CETN1|1068|centrin, EF-hand protein, 1##AK312047|CETN1|1068|centrin, EF-hand protein, 1##DQ890970|CETN1|1068|centrin, EF-hand protein, 1##DQ894144|CETN1|1068|centrin, EF-hand protein, 1##AB005145|COLEC12|81035|collectin sub-family member 12##BC060789|COLEC12|81035|collectin sub-family member 12##AB038518|COLEC12|81035|collectin sub-family member 12##NM_130386|COLEC12|81035|collectin sub-family member 12##DQ980621|CLUL1|27098|clusterin-like 1 (retinal)##NM_199167|CLUL1|27098|clusterin-like 1 (retinal)##AF395889|CLUL1|27098|clusterin-like 1 (retinal)##D63813|CLUL1|27098|clusterin-like 1 (retinal)##NM_001071|TYMS|7298|thymidylate synthetase##BC083512|TYMS|7298|thymidylate synthetase##AK223372|TYMS|7298|thymidylate synthetase##BC013919|TYMS|7298|thymidylate synthetase##AB062290|TYMS|7298|thymidylate synthetase##AK314140|TYMS|7298|thymidylate synthetase##X02308|TYMS|7298|thymidylate synthetase	0.652368	CTCF.p2:3:0.652
chr6	151213163	151213301	reg1010176.p1	11.634	+	TSC_hg19_v1_chr6_+_151187310 AK315378 NM_001242768	-25843	+	TSC_hg19_v1_chr6_+_151187064 AL117452	-26131	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	-26311	+	TSC_hg19_v1_chr6_+_151561133 BC047728 NM_005100	347882	+	U81607 TSC_hg19_v1_chr6_+_151561544 AB210003 BC046095 AK307578	348296	+	TSC_hg19_v1_chr6_+_151561578 BC006094	348349	+	AK315378|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242768|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AL117452|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC047728|AKAP12|9590|A kinase (PRKA) anchor protein 12##NM_005100|AKAP12|9590|A kinase (PRKA) anchor protein 12##U81607|AKAP12|9590|A kinase (PRKA) anchor protein 12##AB210003|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC046095|AKAP12|9590|A kinase (PRKA) anchor protein 12##AK307578|AKAP12|9590|A kinase (PRKA) anchor protein 12	0.905338	CTCF.p2:-6:0.905
chrX	114978398	114978547	reg1006754.p1	11.634	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-150604	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-181430	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-182866	+	BC003645 TSC_hg19_v1_chrX_-_115085443	106967	-	AK313927 NM_000686 X87723 U16957	323523	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	589295	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:23:0.429
chr1	10270353	10270462	reg1008070.p1	11.633	+	AB014584 TSC_hg19_v1_chr1_+_10093218	-177194	+	TSC_hg19_v1_chr1_+_10093015 AB028839 NM_001105562 NM_006048	-177392	+	BC063013 NM_052960 BC033883 AF399927 AK312027 AY145438 CU687628	-213123	+	TSC_hg19_v1_chr1_+_10270680 AK308121 NM_015074 NM_183416 AF257176 AY139835	364	+	NM_002631 TSC_hg19_v1_chr1_+_10459125 AK300952 AK290404 AK296889 AK303898 AK304423 BC000368 U30255 AB463169 AK298830	188722	+	AF521016 NM_198544 NM_199006 NM_199294	219751	+	AB014584|UBE4B|10277|ubiquitination factor E4B##AB028839|UBE4B|10277|ubiquitination factor E4B##NM_001105562|UBE4B|10277|ubiquitination factor E4B##NM_006048|UBE4B|10277|ubiquitination factor E4B##BC063013|RBP7|116362|retinol binding protein 7, cellular##NM_052960|RBP7|116362|retinol binding protein 7, cellular##BC033883|RBP7|116362|retinol binding protein 7, cellular##AF399927|RBP7|116362|retinol binding protein 7, cellular##AK312027|RBP7|116362|retinol binding protein 7, cellular##AY145438|RBP7|116362|retinol binding protein 7, cellular##AK308121|KIF1B|23095|kinesin family member 1B##NM_015074|KIF1B|23095|kinesin family member 1B##NM_183416|KIF1B|23095|kinesin family member 1B##AF257176|KIF1B|23095|kinesin family member 1B##AY139835|KIF1B|23095|kinesin family member 1B##NM_002631|PGD|5226|phosphogluconate dehydrogenase##AK300952|PGD|5226|phosphogluconate dehydrogenase##AK290404|PGD|5226|phosphogluconate dehydrogenase##AK296889|PGD|5226|phosphogluconate dehydrogenase##AK303898|PGD|5226|phosphogluconate dehydrogenase##AK304423|PGD|5226|phosphogluconate dehydrogenase##BC000368|PGD|5226|phosphogluconate dehydrogenase##U30255|PGD|5226|phosphogluconate dehydrogenase##AK298830|PGD|5226|phosphogluconate dehydrogenase##AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1	0.999659	CTCF.p2:3:1.000
chr4	70036360	70036474	reg1007208.p2	11.633	+	AK313190 TSC_hg19_v1_chr4_+_69962191 BC030974 NM_001074 BC107727 AK223142 J05428 DQ893657 DQ895814	-74203	+	NM_001075 NM_001144767	-150305	-	HQ258456 BC130533 AY358727 AY542891 NM_024743	-218924	-	AF016492 BC069441 BC107059 BC107060 NM_001073 AK222839 AK222872 AK292738 AK298432 BC113649	44040	-	AF177272 AF177273 AF177274 NM_001207004 NM_053039 AB451456	109800	+	AY529122 DQ895203 AF064200 AF081793 AJ005162 Y00317 BC026264 TSC_hg19_v1_chr4_-_70361624 AK292748 NM_021139	325185	-	AK313190|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##BC030974|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##NM_001074|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##AK223142|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##J05428|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##DQ893657|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##DQ895814|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##NM_001075|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##NM_001144767|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##HQ258456|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##BC130533|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##AY358727|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##AY542891|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##NM_024743|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##AF016492|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC069441|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC107059|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC107060|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##NM_001073|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##AK222839|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK222872|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK292738|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK298432|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##BC113649|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AF177272|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF177273|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF177274|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##NM_001207004|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##NM_053039|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AB451456|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AY529122|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##DQ895203|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF064200|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF081793|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AJ005162|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##Y00317|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##BC026264|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AK292748|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##NM_021139|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4	0.569074	CTCF.p2:-2:0.569
chr1	178722644	178722758	reg1008809.p1	11.632	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	-28328	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-240435	+	AF047711 NM_004841 AK290308	-412067	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	117445	-	TSC_hg19_v1_chr1_+_178995028 AB007944	272319	+	TSC_hg19_v1_chr1_+_178995055 AB480690 BC051794 NM_014864	272363	+	BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##AB007944|FAM20B|9917|family with sequence similarity 20, member B##AB480690|FAM20B|9917|family with sequence similarity 20, member B##BC051794|FAM20B|9917|family with sequence similarity 20, member B##NM_014864|FAM20B|9917|family with sequence similarity 20, member B	0.637972	CTCF.p2:11:0.638
chr2	202042212	202042336	reg1009709.p1	11.631	+	AF041459 NM_001202515	-37277	+	NM_001202518 AK304585 AF041462	-44552	+	TSC_hg19_v1_chr2_+_201983419 AK289913 AK315208	-58802	+	NM_001206524 NM_001206542 NM_001230 NM_032974 NM_032976 NM_032977	5346	+	TSC_hg19_v1_chr2_+_202047863 AK310746 U86214 AK304859 AK225475 AY690601 BC042844 U60519 AJ487678 AJ487679	5586	+	NM_001080124 NM_001228 NM_033355 NM_033358 AF422927 AF422928 BC010390 AK310630 BC017031 U60520 X98176	55951	+	AF041459|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202515|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202518|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK304585|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF041462|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK289913|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK315208|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001080124|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001228|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033355|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033358|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422927|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422928|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC010390|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310630|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC017031|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##U60520|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98176|CASP8|841|caspase 8, apoptosis-related cysteine peptidase	0.938083	CTCF.p2:-1:0.938
chr10	12944237	12944378	reg1010101.p1	11.630	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-552530	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-552590	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	-552732	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	99392	-	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	197838	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	259261	+	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10	0.999628	CTCF.p2:-6:1.000
chr4	163959398	163959517	reg1007978.p1	11.630	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	-874306	-	AK294459 NM_014247	-3770460	+	AK058100 NM_152543	-4003125	-	TSC_hg19_v1_chr4_-_164088002 AK097352	128535	-	TSC_hg19_v1_chr4_-_164088043 AK308601	128580	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	128621	-	AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.525135	CTCF.p2:39:0.509
chr11	94237974	94238114	reg1009904.p1	11.629	+	TSC_hg19_v1_chr11_+_94227168 NM_017704 AF025354 AK000196 BC017798 AK000448 AL833977	-10886	+	U37359 TSC_hg19_v1_chr11_-_94227011 BC017823 BC005241 AK095388 AF022778 AK308318 NM_005590 NM_005591	-11071	-	TSC_hg19_v1_chr11_-_94134589 AK315161 NM_016540	-103462	-	NM_001190462	7650	+	AK293616 NM_002033 TSC_hg19_v1_chr11_+_94277086 M58597 BC136373 BC136374	39035	+	TSC_hg19_v1_chr11_+_94277605 M58596	39555	+	NM_017704|ANKRD49|54851|ankyrin repeat domain 49##AF025354|ANKRD49|54851|ankyrin repeat domain 49##AK000196|ANKRD49|54851|ankyrin repeat domain 49##BC017798|ANKRD49|54851|ankyrin repeat domain 49##AK000448|ANKRD49|54851|ankyrin repeat domain 49##AL833977|ANKRD49|54851|ankyrin repeat domain 49##U37359|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC017823|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC005241|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK095388|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AF022778|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK308318|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005590|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005591|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK315161|GPR83|10888|G protein-coupled receptor 83##NM_016540|GPR83|10888|G protein-coupled receptor 83##NM_001190462|LOC643037|643037|uncharacterized LOC643037##AK293616|PIWIL4|143689|piwi-like 4 (Drosophila)##NM_002033|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58597|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136373|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136374|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)	0.977502	CTCF.p2:6:0.978
chr2	179994506	179994618	reg1006136.p2	11.629	+	AL832777 NM_173648	-79777	-	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-322459	-	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	-334861	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	134843	-	AK057999 NM_001113398	432752	-	AK096822 NM_001113397	616206	-	AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##X98114|TTN|7273|titin##X98115|TTN|7273|titin##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B##AK096822|ZNF385B|151126|zinc finger protein 385B##NM_001113397|ZNF385B|151126|zinc finger protein 385B	0.976707	CTCF.p2:3:0.977
chr3	98713117	98713262	reg1008828.p1	11.629	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-92697	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-261602	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-261944	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	644261	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	823556	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	881802	-	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like	0.980284	CTCF.p2:18:0.980
chr14	91790062	91790188	reg1005981.p1	11.628	+	BC098567 NM_003485	-69931	-	BC128536 NM_001177676	-79274	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-209098	+	TSC_hg19_v1_chr14_-_91884159 AF070587	94023	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	94050	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	186375	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.997279	CTCF.p2:-16:0.997
chr1	223900033	223900145	reg1005640.p2	11.627	+	AK316211 AK297800 NM_001146068	-10816	+	TSC_hg19_v1_chr1_-_223853404 NM_001143962	-46672	-	TSC_hg19_v1_chr1_-_223853364 BC157893	-46719	-	TSC_hg19_v1_chr1_+_223900093 BC007686 BC011828 NM_001748	28	+	M23254 TSC_hg19_v1_chr1_+_223900223 AK303952 AF261089 AK315179 BC021303	129	+	TSC_hg19_v1_chr1_+_223900240 AB209855	159	+	AK316211|CAPN2|824|calpain 2, (m/II) large subunit##AK297800|CAPN2|824|calpain 2, (m/II) large subunit##NM_001146068|CAPN2|824|calpain 2, (m/II) large subunit##NM_001143962|CAPN8|388743|calpain 8##BC157893|CAPN8|388743|calpain 8##BC007686|CAPN2|824|calpain 2, (m/II) large subunit##BC011828|CAPN2|824|calpain 2, (m/II) large subunit##NM_001748|CAPN2|824|calpain 2, (m/II) large subunit##M23254|CAPN2|824|calpain 2, (m/II) large subunit##AK303952|CAPN2|824|calpain 2, (m/II) large subunit##AF261089|CAPN2|824|calpain 2, (m/II) large subunit##AK315179|CAPN2|824|calpain 2, (m/II) large subunit##BC021303|CAPN2|824|calpain 2, (m/II) large subunit##AB209855|CAPN2|824|calpain 2, (m/II) large subunit	0.387949	CTCF.p2:-12:0.388
chr12	53493347	53493456	reg1006561.p2	11.627	+	M62402 TSC_hg19_v1_chr12_+_53491450 AK313158 BC003507 BC011708 BC005007 DQ892995 DQ896243 AB528507 CR541791 M69054	-1924	+	TSC_hg19_v1_chr12_+_53491420 NM_002178 BC010162	-1974	+	TSC_hg19_v1_chr12_-_53473175 AK294092 NM_032840	-20214	-	NM_003578 TSC_hg19_v1_chr12_+_53497278	3874	+	TSC_hg19_v1_chr12_+_53497289 AF059203 BC096090 BC096091 BC096092 BC099626 AF099031	3923	+	AB044561 NM_001244706	64875	-	M62402|IGFBP6|3489|insulin-like growth factor binding protein 6##AK313158|IGFBP6|3489|insulin-like growth factor binding protein 6##BC003507|IGFBP6|3489|insulin-like growth factor binding protein 6##BC011708|IGFBP6|3489|insulin-like growth factor binding protein 6##BC005007|IGFBP6|3489|insulin-like growth factor binding protein 6##DQ892995|IGFBP6|3489|insulin-like growth factor binding protein 6##DQ896243|IGFBP6|3489|insulin-like growth factor binding protein 6##CR541791|IGFBP6|3489|insulin-like growth factor binding protein 6##M69054|IGFBP6|3489|insulin-like growth factor binding protein 6##NM_002178|IGFBP6|3489|insulin-like growth factor binding protein 6##BC010162|IGFBP6|3489|insulin-like growth factor binding protein 6##AK294092|SPRYD3|84926|SPRY domain containing 3##NM_032840|SPRYD3|84926|SPRY domain containing 3##NM_003578|SOAT2|8435|sterol O-acyltransferase 2##AF059203|SOAT2|8435|sterol O-acyltransferase 2##BC096090|SOAT2|8435|sterol O-acyltransferase 2##BC096091|SOAT2|8435|sterol O-acyltransferase 2##BC096092|SOAT2|8435|sterol O-acyltransferase 2##BC099626|SOAT2|8435|sterol O-acyltransferase 2##AF099031|SOAT2|8435|sterol O-acyltransferase 2##AB044561|CSAD|51380|cysteine sulfinic acid decarboxylase##NM_001244706|CSAD|51380|cysteine sulfinic acid decarboxylase	0.987623	CTCF.p2:2:0.963
chr4	185961063	185961175	reg1008511.p1	11.627	+	BC140795 BC144567 BC144568 BC144569 NM_001029887	-21081	+	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	-213885	-	TSC_hg19_v1_chr4_-_185747123 L09229 AK292798	-214018	-	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	103351	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	164025	-	NM_031953	170164	+	BC140795|HELT|391723|helt bHLH transcription factor##BC144567|HELT|391723|helt bHLH transcription factor##BC144569|HELT|391723|helt bHLH transcription factor##NM_001029887|HELT|391723|helt bHLH transcription factor##AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##L09229|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK292798|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430##NM_031953|SNX25|83891|sorting nexin 25	0.413319	CTCF.p2:-7:0.413
chr8	105800176	105800302	reg1007961.p1	11.627	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-198992	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-199064	-	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	-321024	-	AF119334 BC109222 BC109223 NM_012082	530907	+	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	1482184	+	AK296561 NM_001198532	1659912	+	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1	0.043358	
chrX	67930855	67930981	reg1009168.p1	11.627	+	TSC_hg19_v1_chrX_+_67913490 D80011	-17427	+	TSC_hg19_v1_chrX_+_67913480 AK291747 NM_001142504	-17438	+	BC035587 NM_001142503 NM_014725 CR749411	-63359	+	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	117937	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	454388	-	AF087142 NM_015686 BC136518 BC136519	794165	+	D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK291747|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142504|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##BC035587|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142503|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_014725|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##CR749411|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B	0.083185	
chr1	160651382	160651543	reg1006620.p1	11.626	+	AK314244 NM_003037 BC012602	-34399	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	-102174	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	-102215	-	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	30124	-	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	57602	+	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	114536	+	AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9	0.921119	CTCF.p2:25:0.921
chr11	83547954	83548096	reg1009429.p1	11.626	+	AK299778 CR933674 NM_001142702	-154574	-	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	-550620	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	-550992	-	AK294375 AK126776 AK295624 NM_001142700	436251	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	480356	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	1086207	-	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)	0.98003	CTCF.p2:-14:0.980
chr16	12913336	12913448	reg1007425.p2	11.625	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-15673	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-15741	-	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-842819	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	82076	+	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	1100639	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	1251694	+	AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2	0.981041	CTCF.p2:5:0.971
chr20	43991546	43991675	reg1007987.p1	11.625	+	NM_001197129	-1034	+	CR542045 CR542074 DQ890718 DQ893898 AB464261 TSC_hg19_v1_chr20_-_43977065 X67016 AK222695 AK223243 AK303964 AK312507 BC030805 D13292 NM_002999	-14555	-	BC151219 AK074595 BC141811 AK074597 NM_003833 NM_030590 NM_030592	-54668	-	NM_001099791 NM_033542 TSC_hg19_v1_chr20_+_43991822 AK075264 AK172738 AX775821 BC048286 BC023562 AL591714 AK309429	207	+	TSC_hg19_v1_chr20_+_43992151 EU832322 EU832407	531	+	CU691416 BC036785 NM_014477 AB017802	15344	-	NM_001197129|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##CR542045|SDC4|6385|syndecan 4##CR542074|SDC4|6385|syndecan 4##DQ890718|SDC4|6385|syndecan 4##DQ893898|SDC4|6385|syndecan 4##X67016|SDC4|6385|syndecan 4##AK222695|SDC4|6385|syndecan 4##AK223243|SDC4|6385|syndecan 4##AK303964|SDC4|6385|syndecan 4##AK312507|SDC4|6385|syndecan 4##BC030805|SDC4|6385|syndecan 4##D13292|SDC4|6385|syndecan 4##NM_002999|SDC4|6385|syndecan 4##BC151219|MATN4|8785|matrilin 4##AK074595|MATN4|8785|matrilin 4##BC141811|MATN4|8785|matrilin 4##AK074597|MATN4|8785|matrilin 4##NM_003833|MATN4|8785|matrilin 4##NM_030590|MATN4|8785|matrilin 4##NM_030592|MATN4|8785|matrilin 4##NM_001099791|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_033542|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK075264|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK172738|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC048286|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC023562|SYS1-DBNDD2|767557|SYS1-DBNDD2 readthrough##AL591714|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK309429|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##EU832322|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##EU832407|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC036785|TP53TG5|27296|TP53 target 5##NM_014477|TP53TG5|27296|TP53 target 5##AB017802|TP53TG5|27296|TP53 target 5	0.841026	CTCF.p2:0:0.841
chr5	136656259	136656376	reg1009724.p1	11.625	+	NM_001167576 NM_001167577 NM_020389	-955154	-	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-1187733	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-1187788	+	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	177924	-	TSC_hg19_v1_chr5_-_136834420 AK094489	178110	-	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	178663	-	NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.814808	CTCF.p2:-3:0.815
chr10	32479942	32480076	reg1009409.p1	11.624	+	TSC_hg19_v1_chr10_-_32345341 NM_004521	-134649	-	TSC_hg19_v1_chr10_-_32345335 BC080604 BC010885 BC111042 AK289413 AK299542 BC065267 AK307502	-134695	-	BC126279 BC126281 TSC_hg19_v1_chr10_-_32345152 X65873	-134841	-	CU691366 TSC_hg19_v1_chr10_-_32636082 AK092304 AX747467 AK309822	155953	-	TSC_hg19_v1_chr10_-_32636116 AF277374 FJ230887 NM_025209	156099	-	TSC_hg19_v1_chr10_-_32636137 BC036529 CR749375	156140	-	NM_004521|KIF5B|3799|kinesin family member 5B##BC080604|KIF5B|3799|kinesin family member 5B##BC010885|KIF5B|3799|kinesin family member 5B##BC111042|KIF5B|3799|kinesin family member 5B##AK289413|KIF5B|3799|kinesin family member 5B##AK299542|KIF5B|3799|kinesin family member 5B##BC065267|KIF5B|3799|kinesin family member 5B##AK307502|KIF5B|3799|kinesin family member 5B##BC126279|KIF5B|3799|kinesin family member 5B##BC126281|KIF5B|3799|kinesin family member 5B##X65873|KIF5B|3799|kinesin family member 5B##AK092304|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AK309822|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AF277374|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##NM_025209|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##BC036529|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##CR749375|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	0.904755	CTCF.p2:-3:0.905
chr9	33403474	33403615	reg1010509.p1	11.623	+	AK297860 TSC_hg19_v1_chr9_-_33402631 AK301949	-932	-	BC062701 BC119672 BC119673 AB006190 NM_001170 TSC_hg19_v1_chr9_-_33402526	-1029	-	AK294028 TSC_hg19_v1_chr9_-_33402480 AK297885	-1066	-	BT007199 CR541991 CR542025 TSC_hg19_v1_chr9_-_33447592 AJ493597 BC013566 AB001325 AK292208 AK303206 AK315760 AK095363 NM_004925	44042	-	AK026193 TSC_hg19_v1_chr9_-_33465258	61680	-	TSC_hg19_v1_chr9_-_33473861 BC030139	70309	-	AK297860|AQP7|364|aquaporin 7##AK301949|AQP7|364|aquaporin 7##BC062701|AQP7|364|aquaporin 7##BC119672|AQP7|364|aquaporin 7##BC119673|AQP7|364|aquaporin 7##AB006190|AQP7|364|aquaporin 7##NM_001170|AQP7|364|aquaporin 7##AK294028|AQP7|364|aquaporin 7##AK297885|AQP7|364|aquaporin 7##BT007199|AQP3|360|aquaporin 3 (Gill blood group)##CR541991|AQP3|360|aquaporin 3 (Gill blood group)##CR542025|AQP3|360|aquaporin 3 (Gill blood group)##AJ493597|AQP3|360|aquaporin 3 (Gill blood group)##BC013566|AQP3|360|aquaporin 3 (Gill blood group)##AB001325|AQP3|360|aquaporin 3 (Gill blood group)##AK292208|AQP3|360|aquaporin 3 (Gill blood group)##AK303206|AQP3|360|aquaporin 3 (Gill blood group)##AK315760|AQP3|360|aquaporin 3 (Gill blood group)##AK095363|AQP3|360|aquaporin 3 (Gill blood group)##NM_004925|AQP3|360|aquaporin 3 (Gill blood group)##AK026193|NOL6|65083|nucleolar protein family 6 (RNA-associated)##BC030139|NOL6|65083|nucleolar protein family 6 (RNA-associated)	0.92769	CTCF.p2:-9:0.928
chr9	95397121	95397221	reg1007092.p2	11.623	+	AB011792 AK303922 AK312820 AK296458 BX537976 NM_001197295 NM_001197296 NM_001393	-98859	-	TSC_hg19_v1_chr9_-_95244789 AK308107 AY029191 AY358329 BC022059 BC063114 NM_001193335 NM_017680	-152375	-	AK027359 AK304501 TSC_hg19_v1_chr9_-_95244656 AK172737	-152524	-	AF520811 TSC_hg19_v1_chr9_-_95432355 AK023225 AF351202	35142	-	TSC_hg19_v1_chr9_-_95432542 BC026154 NM_022755	35386	-	AB014599 TSC_hg19_v1_chr9_-_95527124 AY052562 NM_001003800 NM_015250 BC073970	129912	-	AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK308107|ASPN|54829|asporin##AY029191|ASPN|54829|asporin##AY358329|ASPN|54829|asporin##BC022059|ASPN|54829|asporin##BC063114|ASPN|54829|asporin##NM_001193335|ASPN|54829|asporin##NM_017680|ASPN|54829|asporin##AK027359|ASPN|54829|asporin##AK304501|ASPN|54829|asporin##AK172737|ASPN|54829|asporin##AF520811|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AK023225|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF351202|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##BC026154|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##NM_022755|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AB014599|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AY052562|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_001003800|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_015250|BICD2|23299|bicaudal D homolog 2 (Drosophila)##BC073970|BICD2|23299|bicaudal D homolog 2 (Drosophila)	0.988977	CTCF.p2:4:0.989
chr12	53739106	53739229	reg1008347.p1	11.622	+	AY150674 NM_001173467	-9164	-	AB527932 EU446563 BC101549 BC113613 AY150673 AF477981 NM_152860 AF466179	-9684	-	TSC_hg19_v1_chr12_-_53715374 AK293342 BC000659 BC018836 AY237818 NM_001173466 NM_015665	-23790	-	TSC_hg19_v1_chr12_+_53773935 BC062539 NM_001251825 NM_138473 AF255682 AJ272134	34823	+	BC043224 NM_003109	35257	+	NM_001164690 NM_001164691 NM_020547 AK313593 AF172932 BC126316 BC136356 AY714878 HQ258327	78511	+	AY150674|SP7|121340|Sp7 transcription factor##NM_001173467|SP7|121340|Sp7 transcription factor##EU446563|SP7|121340|Sp7 transcription factor##BC101549|SP7|121340|Sp7 transcription factor##BC113613|SP7|121340|Sp7 transcription factor##AY150673|SP7|121340|Sp7 transcription factor##AF477981|SP7|121340|Sp7 transcription factor##NM_152860|SP7|121340|Sp7 transcription factor##AF466179|SP7|121340|Sp7 transcription factor##AK293342|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BC000659|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BC018836|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AY237818|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##NM_001173466|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##NM_015665|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BC062539|SP1|6667|Sp1 transcription factor##NM_001251825|SP1|6667|Sp1 transcription factor##NM_138473|SP1|6667|Sp1 transcription factor##AF255682|SP1|6667|Sp1 transcription factor##AJ272134|SP1|6667|Sp1 transcription factor##BC043224|SP1|6667|Sp1 transcription factor##NM_003109|SP1|6667|Sp1 transcription factor##NM_001164690|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_001164691|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_020547|AMHR2|269|anti-Mullerian hormone receptor, type II##AK313593|AMHR2|269|anti-Mullerian hormone receptor, type II##AF172932|AMHR2|269|anti-Mullerian hormone receptor, type II##BC126316|AMHR2|269|anti-Mullerian hormone receptor, type II##BC136356|AMHR2|269|anti-Mullerian hormone receptor, type II##AY714878|AMHR2|269|anti-Mullerian hormone receptor, type II##HQ258327|AMHR2|269|anti-Mullerian hormone receptor, type II	0.990727	CTCF.p2:12:0.991
chr14	55158389	55158523	reg1008966.p1	11.622	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	-123820	+	NM_001161576 NM_015589 BC057838 TSC_hg19_v1_chr14_+_55034359	-124112	+	AK315318 AK289478 TSC_hg19_v1_chr14_+_54976623 NM_006568 BC015063 U66469 CU677207 EU832831 GQ129438	-181845	+	TSC_hg19_v1_chr14_+_55168831 AB028976	10433	+	NM_001161577 BC021726	63071	+	AY137463 AY137464 AY137465 Z16418 S44049 CR536551 DQ892998 DQ896245 S43856 S44053 TSC_hg19_v1_chr14_-_55369545 Z29433 Z29434 U66095 BC025415 U19523 U66097 NM_000161 NM_001024024 NM_001024070 NM_001024071	210958	-	AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_001161576|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_015589|SAMD4A|23034|sterile alpha motif domain containing 4A##BC057838|SAMD4A|23034|sterile alpha motif domain containing 4A##AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1##AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1##NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1##BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1##U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1##EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1##GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1##AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_001161577|SAMD4A|23034|sterile alpha motif domain containing 4A##BC021726|SAMD4A|23034|sterile alpha motif domain containing 4A##AY137463|GCH1|2643|GTP cyclohydrolase 1##AY137464|GCH1|2643|GTP cyclohydrolase 1##AY137465|GCH1|2643|GTP cyclohydrolase 1##Z16418|GCH1|2643|GTP cyclohydrolase 1##S44049|GCH1|2643|GTP cyclohydrolase 1##CR536551|GCH1|2643|GTP cyclohydrolase 1##DQ892998|GCH1|2643|GTP cyclohydrolase 1##DQ896245|GCH1|2643|GTP cyclohydrolase 1##S43856|GCH1|2643|GTP cyclohydrolase 1##S44053|GCH1|2643|GTP cyclohydrolase 1##Z29433|GCH1|2643|GTP cyclohydrolase 1##Z29434|GCH1|2643|GTP cyclohydrolase 1##U66095|GCH1|2643|GTP cyclohydrolase 1##BC025415|GCH1|2643|GTP cyclohydrolase 1##U19523|GCH1|2643|GTP cyclohydrolase 1##U66097|GCH1|2643|GTP cyclohydrolase 1##NM_000161|GCH1|2643|GTP cyclohydrolase 1##NM_001024024|GCH1|2643|GTP cyclohydrolase 1##NM_001024070|GCH1|2643|GTP cyclohydrolase 1##NM_001024071|GCH1|2643|GTP cyclohydrolase 1	0.474866	CTCF.p2:12:0.475
chr1	61919183	61919297	reg1007662.p2	11.622	+	TSC_hg19_v1_chr1_+_61869699 AK024964	-49517	+	TSC_hg19_v1_chr1_+_61548292 AB037860 NM_001134673 NM_005595 AK299356 BC022264 CU692518 DQ893250 DQ896579	-371182	+	TSC_hg19_v1_chr1_+_61547427 AK299579 NM_001145512	-371780	+	TSC_hg19_v1_chr1_+_61924622 AK096483	5452	+	AK311444 AK311705 TSC_hg19_v1_chr1_-_62190802 CU688668	271531	-	TSC_hg19_v1_chr1_-_62190806 BC048995 BC029486	271579	-	AK024964|NFIA|4774|nuclear factor I/A##AB037860|NFIA|4774|nuclear factor I/A##NM_001134673|NFIA|4774|nuclear factor I/A##NM_005595|NFIA|4774|nuclear factor I/A##AK299356|NFIA|4774|nuclear factor I/A##BC022264|NFIA|4774|nuclear factor I/A##DQ893250|NFIA|4774|nuclear factor I/A##DQ896579|NFIA|4774|nuclear factor I/A##AK299579|NFIA|4774|nuclear factor I/A##NM_001145512|NFIA|4774|nuclear factor I/A##AK096483|NFIA|4774|nuclear factor I/A##AK311444|TM2D1|83941|TM2 domain containing 1##AK311705|TM2D1|83941|TM2 domain containing 1##BC048995|TM2D1|83941|TM2 domain containing 1##BC029486|TM2D1|83941|TM2 domain containing 1	0.31427	CTCF.p2:-5:0.314
chr6	151996985	151997114	reg1009588.p1	11.622	+	NM_025059 BC060803 BC035003 AK225330 AK026958	-181831	+	AK298490 TSC_hg19_v1_chr6_+_151773653 AK310840 AL110241 BC011348 CU679902	-223407	+	AK022972 NM_024573	-223628	+	NM_001122742 U68068 AK309580 AB588629 AB588630	14644	+	NM_001122741 AK293019 AK313644	129774	+	NM_001122740 U68067	131404	+	NM_025059|C6orf97|80129|chromosome 6 open reading frame 97##BC060803|C6orf97|80129|chromosome 6 open reading frame 97##BC035003|C6orf97|80129|chromosome 6 open reading frame 97##AK225330|C6orf97|80129|chromosome 6 open reading frame 97##AK026958|C6orf97|80129|chromosome 6 open reading frame 97##AK298490|C6orf211|79624|chromosome 6 open reading frame 211##AK310840|C6orf211|79624|chromosome 6 open reading frame 211##AL110241|C6orf211|79624|chromosome 6 open reading frame 211##BC011348|C6orf211|79624|chromosome 6 open reading frame 211##AK022972|C6orf211|79624|chromosome 6 open reading frame 211##NM_024573|C6orf211|79624|chromosome 6 open reading frame 211##NM_001122742|ESR1|2099|estrogen receptor 1##U68068|ESR1|2099|estrogen receptor 1##AK309580|ESR1|2099|estrogen receptor 1##AB588629|ESR1|2099|estrogen receptor 1##AB588630|ESR1|2099|estrogen receptor 1##NM_001122741|ESR1|2099|estrogen receptor 1##AK293019|ESR1|2099|estrogen receptor 1##AK313644|ESR1|2099|estrogen receptor 1##NM_001122740|ESR1|2099|estrogen receptor 1##U68067|ESR1|2099|estrogen receptor 1	0.65549	CTCF.p2:-3:0.655
chr8	97176664	97176803	reg1009039.p1	11.621	+	BC127948 BC127947 AJ537424 NM_001001557	-3752	-	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	-895268	-	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	-895682	+	CR542176 CR542196 TSC_hg19_v1_chr8_-_97247774 AK307085 NM_001199975 BC041005 AK295007 AK311756 M22348 X13585 M26700 BC005230 NM_006294	71076	-	BC012995 NM_015942 TSC_hg19_v1_chr8_-_97273837 AK309002	97084	-	TSC_hg19_v1_chr8_+_97274125 AK293036	97385	+	BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6##BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_001199975|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC012995|MTERFD1|51001|MTERF domain containing 1##NM_015942|MTERFD1|51001|MTERF domain containing 1##AK309002|MTERFD1|51001|MTERF domain containing 1##AK293036|PTDSS1|9791|phosphatidylserine synthase 1	0.81142	CTCF.p2:11:0.811
chr14	76044149	76044282	reg1007628.p2	11.620	+	TSC_hg19_v1_chr14_+_75988840 D42106	-55363	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	-55425	+	BC051303 NM_001135049	-145379	+	NM_017791 AY260572 AY260577 BC019087 AK000378	750	+	AK297002 NM_001195283	27589	+	AF134159 TSC_hg19_v1_chr14_-_76127220 AK311764 AL136658 AF136971 AF161406 BC002444	82981	-	D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AF134159|C14orf1|11161|chromosome 14 open reading frame 1##AK311764|C14orf1|11161|chromosome 14 open reading frame 1##AL136658|C14orf1|11161|chromosome 14 open reading frame 1##AF136971|C14orf1|11161|chromosome 14 open reading frame 1##AF161406|C14orf1|11161|chromosome 14 open reading frame 1##BC002444|C14orf1|11161|chromosome 14 open reading frame 1	0.943108	CTCF.p2:-20:0.943
chr19	39818858	39818975	reg1006563.p1	11.620	+	NM_020862	-12941	-	AY129150 NM_172140 BC117482 BC126183 BC074985 AY336716 HQ258085 AY184372 HQ214053	-31904	+	BC113581 BC113583 AY129148 DQ126337 NM_172138	-59762	+	AB001993 BC022207 BC061922 BC080180 TSC_hg19_v1_chr19_-_39826665	7730	-	BC143548 BC143546 TSC_hg19_v1_chr19_-_39826684 BC093799 BC101818 BC143543 NM_004877	7784	-	TSC_hg19_v1_chr19_+_39833098 AK001073	14181	+	NM_020862|LRFN1|57622|leucine rich repeat and fibronectin type III domain containing 1##AY129150|IL29|282618|interleukin 29 (interferon, lambda 1)##NM_172140|IL29|282618|interleukin 29 (interferon, lambda 1)##BC117482|IL29|282618|interleukin 29 (interferon, lambda 1)##BC126183|IL29|282618|interleukin 29 (interferon, lambda 1)##BC074985|IL29|282618|interleukin 29 (interferon, lambda 1)##AY336716|IL29|282618|interleukin 29 (interferon, lambda 1)##HQ258085|IL29|282618|interleukin 29 (interferon, lambda 1)##AY184372|IL29|282618|interleukin 29 (interferon, lambda 1)##HQ214053|IL29|282618|interleukin 29 (interferon, lambda 1)##BC113581|IL28A|282616|interleukin 28A (interferon, lambda 2)##BC113583|IL28A|282616|interleukin 28A (interferon, lambda 2)##AY129148|IL28A|282616|interleukin 28A (interferon, lambda 2)##DQ126337|IL28A|282616|interleukin 28A (interferon, lambda 2)##NM_172138|IL28A|282616|interleukin 28A (interferon, lambda 2)##AB001993|GMFG|9535|glia maturation factor, gamma##BC022207|GMFG|9535|glia maturation factor, gamma##BC061922|GMFG|9535|glia maturation factor, gamma##BC080180|GMFG|9535|glia maturation factor, gamma##BC143548|GMFG|9535|glia maturation factor, gamma##BC143546|GMFG|9535|glia maturation factor, gamma##BC093799|GMFG|9535|glia maturation factor, gamma##BC101818|GMFG|9535|glia maturation factor, gamma##BC143543|GMFG|9535|glia maturation factor, gamma##NM_004877|GMFG|9535|glia maturation factor, gamma##AK001073|SAMD4B|55095|sterile alpha motif domain containing 4B	0.996395	CTCF.p2:4:0.996
chr6	39860421	39860533	reg1007710.p1	11.620	+	NM_015345 AL833083 BC128388	-99659	+	TSC_hg19_v1_chr6_+_39760151 AK310941 AB002379 NM_001201427 BC047575	-100315	+	TSC_hg19_v1_chr6_+_39760140 AK091749 AX747160	-100338	+	AB527188 AJ224328 NM_005943	34908	-	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	41737	-	BC142616 AB033072 NM_020737 AK291474	694667	-	NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AK310941|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AB002379|DAAM2|23500|dishevelled associated activator of morphogenesis 2##NM_001201427|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC047575|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2	0.994819	CTCF.p2:9:0.995
chr7	134628681	134628800	reg1007182.p1	11.620	+	BC014035 TSC_hg19_v1_chr7_+_134576197 BC061926 BC005006 D90452 D90453	-52467	+	NM_033139 NM_033140 TSC_hg19_v1_chr7_+_134576161	-52585	+	TSC_hg19_v1_chr7_+_134464419 BC040354	-164318	+	TSC_hg19_v1_chr7_+_134671258 AK302827 NM_178563 BC030651 AL832281 AK023045 AK311252	42545	+	NM_018295 TSC_hg19_v1_chr7_+_134832838 AK001862 AK225055 AK301268 BC020942	204107	+	NM_001243753 NM_001243755	225485	-	BC014035|CALD1|800|caldesmon 1##BC061926|CALD1|800|caldesmon 1##BC005006|CALD1|800|caldesmon 1##D90452|CALD1|800|caldesmon 1##D90453|CALD1|800|caldesmon 1##NM_033139|CALD1|800|caldesmon 1##NM_033140|CALD1|800|caldesmon 1##BC040354|CALD1|800|caldesmon 1##AK302827|AGBL3|340351|ATP/GTP binding protein-like 3##NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3##BC030651|AGBL3|340351|ATP/GTP binding protein-like 3##AL832281|AGBL3|340351|ATP/GTP binding protein-like 3##AK023045|AGBL3|340351|ATP/GTP binding protein-like 3##NM_018295|TMEM140|55281|transmembrane protein 140##AK001862|TMEM140|55281|transmembrane protein 140##AK225055|TMEM140|55281|transmembrane protein 140##AK301268|TMEM140|55281|transmembrane protein 140##BC020942|TMEM140|55281|transmembrane protein 140##NM_001243753|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243755|C7orf49|78996|chromosome 7 open reading frame 49	0.8024	CTCF.p2:4:0.802
chr15	30442278	30442412	reg1009990.p1	11.619	+	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-327722	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-328003	-	NM_015307	-579419	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	243367	-	TSC_hg19_v1_chr15_+_30918372 BC071990	476041	+	BC105788 NM_001039841	476533	+	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B	1.122672	CTCF.p2:0:1.000
chr18	77006620	77006770	reg1009811.p1	11.619	+	TSC_hg19_v1_chr18_+_76856487 CU690988	-150196	+	TSC_hg19_v1_chr18_+_76829420 BC053561	-177246	+	BC036473 TSC_hg19_v1_chr18_+_76829395 AK308291 BC022535 BC125219 BC125220 NM_198531 AK093704 AX748269 AK295981	-177296	+	TSC_hg19_v1_chr18_+_77155750 NM_006162 NM_172388 NM_172390 U80917	149118	+	TSC_hg19_v1_chr18_+_77155929 AK292641	149238	+	U80919 TSC_hg19_v1_chr18_+_77155946	149251	+	BC053561|ATP9B|374868|ATPase, class II, type 9B##BC036473|ATP9B|374868|ATPase, class II, type 9B##AK308291|ATP9B|374868|ATPase, class II, type 9B##BC022535|ATP9B|374868|ATPase, class II, type 9B##BC125219|ATP9B|374868|ATPase, class II, type 9B##BC125220|ATP9B|374868|ATPase, class II, type 9B##NM_198531|ATP9B|374868|ATPase, class II, type 9B##AK093704|ATP9B|374868|ATPase, class II, type 9B##AK295981|ATP9B|374868|ATPase, class II, type 9B##NM_006162|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172388|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172390|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80917|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK292641|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80919|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	0.978602	CTCF.p2:9:0.979
chr6	44306365	44306501	reg1009006.p1	11.619	+	TSC_hg19_v1_chr6_-_44281067 AB462941 AB033096 BC131728 NM_020745	-25407	-	BC035022 AK304265 AK301825 NM_182539	-40993	-	TSC_hg19_v1_chr6_+_44244466 AK094365	-61920	+	NM_145026 AK058171	4007	+	NM_001253 TSC_hg19_v1_chr6_+_44355294	48839	+	TSC_hg19_v1_chr6_+_44355461 AK128737 AK299738 BC001568 AB007892 AB590067 CU674768 DQ891623 DQ894814 U86753	49067	+	AB033096|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)##BC131728|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)##NM_020745|AARS2|57505|alanyl-tRNA synthetase 2, mitochondrial (putative)##BC035022|TCTE1|202500|t-complex-associated-testis-expressed 1##AK304265|TCTE1|202500|t-complex-associated-testis-expressed 1##AK301825|TCTE1|202500|t-complex-associated-testis-expressed 1##NM_182539|TCTE1|202500|t-complex-associated-testis-expressed 1##AK094365|TMEM151B|441151|transmembrane protein 151B##NM_145026|SPATS1|221409|spermatogenesis associated, serine-rich 1##AK058171|SPATS1|221409|spermatogenesis associated, serine-rich 1##NM_001253|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)	0.976471	CTCF.p2:10:0.976
chr10	81297051	81297152	reg1005163.p1	11.618	+	BC070048 NM_001099692	-24745	+	TSC_hg19_v1_chr10_-_81205381 AK308876 AK075279 BC053564 BC039249 BC028617 NM_153367	-91841	-	TSC_hg19_v1_chr10_+_81107279 AB529152 CU678858 EU831447	-189814	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	23050	-	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	73603	+	BC022318 NM_003019	411759	-	BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##AK308876|ZCCHC24|219654|zinc finger, CCHC domain containing 24##AK075279|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC053564|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC039249|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC028617|ZCCHC24|219654|zinc finger, CCHC domain containing 24##NM_153367|ZCCHC24|219654|zinc finger, CCHC domain containing 24##EU831447|PPIF|10105|peptidylprolyl isomerase F##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1##BC022318|SFTPD|6441|surfactant protein D##NM_003019|SFTPD|6441|surfactant protein D	0.998371	CTCF.p2:-40:0.998
chr20	35185025	35185165	reg1009823.p1	11.618	+	TSC_hg19_v1_chr20_+_35169921 D82057 AK130879 AK097235 BC002648 AF176042 AF176043	-15172	+	TSC_hg19_v1_chr20_+_35169892 NM_006097 NM_181526	-15209	+	NM_183006 BC153874 TSC_hg19_v1_chr20_+_35090197 BC108706	-94920	+	BC039668 TSC_hg19_v1_chr20_-_35201701	16596	-	TSC_hg19_v1_chr20_+_35201854 NM_001199513 NM_001199514	16797	+	TSC_hg19_v1_chr20_+_35202041 AK313919 NM_021809 AB042646 BC006549 BC012816 AK074802	16906	+	D82057|MYL9|10398|myosin, light chain 9, regulatory##AK130879|MYL9|10398|myosin, light chain 9, regulatory##AK097235|MYL9|10398|myosin, light chain 9, regulatory##BC002648|MYL9|10398|myosin, light chain 9, regulatory##AF176042|MYL9|10398|myosin, light chain 9, regulatory##AF176043|MYL9|10398|myosin, light chain 9, regulatory##NM_006097|MYL9|10398|myosin, light chain 9, regulatory##NM_181526|MYL9|10398|myosin, light chain 9, regulatory##NM_183006|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC153874|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC108706|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_001199513|TGIF2|60436|TGFB-induced factor homeobox 2##NM_001199514|TGIF2|60436|TGFB-induced factor homeobox 2##AK313919|TGIF2|60436|TGFB-induced factor homeobox 2##NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2##AB042646|TGIF2|60436|TGFB-induced factor homeobox 2##BC006549|TGIF2|60436|TGFB-induced factor homeobox 2##BC012816|TGIF2|60436|TGFB-induced factor homeobox 2##AK074802|TGIF2|60436|TGFB-induced factor homeobox 2	0.347169	CTCF.p2:10:0.347
chr17	76130526	76130680	reg1007184.p2	11.617	+	BC023597 NM_007267 TSC_hg19_v1_chr17_-_76128499	-2103	-	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	-3737	+	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	-5765	-	AY358510 NM_001163075	11830	+	TSC_hg19_v1_chr17_+_76164661 AJ002308 AY358916 NM_004710 BC000407 BC105992 BC029755 DQ891832 DQ895019	34057	+	AB451268 AB451395 BT006941 AB591021 BC007872 BC007986 BC006484 AK314950 K02581 TSC_hg19_v1_chr17_-_76183133 NM_003258	52576	-	BC023597|TMC6|11322|transmembrane channel-like 6##NM_007267|TMC6|11322|transmembrane channel-like 6##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6##AY358510|C17orf99|100141515|chromosome 17 open reading frame 99##NM_001163075|C17orf99|100141515|chromosome 17 open reading frame 99##AJ002308|SYNGR2|9144|synaptogyrin 2##AY358916|SYNGR2|9144|synaptogyrin 2##NM_004710|SYNGR2|9144|synaptogyrin 2##BC000407|SYNGR2|9144|synaptogyrin 2##BC105992|SYNGR2|9144|synaptogyrin 2##BC029755|SYNGR2|9144|synaptogyrin 2##DQ891832|SYNGR2|9144|synaptogyrin 2##DQ895019|SYNGR2|9144|synaptogyrin 2##AB451268|TK1|7083|thymidine kinase 1, soluble##AB451395|TK1|7083|thymidine kinase 1, soluble##BT006941|TK1|7083|thymidine kinase 1, soluble##BC007872|TK1|7083|thymidine kinase 1, soluble##BC007986|TK1|7083|thymidine kinase 1, soluble##BC006484|TK1|7083|thymidine kinase 1, soluble##AK314950|TK1|7083|thymidine kinase 1, soluble##K02581|TK1|7083|thymidine kinase 1, soluble##NM_003258|TK1|7083|thymidine kinase 1, soluble	0.976892	CTCF.p2:7:0.977
chr14	81735885	81736034	reg1009328.p1	11.616	+	D14886 NM_201595	-48385	-	D14887 TSC_hg19_v1_chr14_-_81687285 NM_015859 BC050703	-48679	-	AK303378 BC024205 NM_000369 NM_001018036 NM_001142626 M31774 BC108653 BC009237 M73747 M32215 BC063613 AB209207 BC120972 BC120973 BC127628 BC127629 BC141970 S49816 AB384880 AY429111 CU687778 S45272	-314093	+	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	128867	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	264189	-	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	264268	-	D14886|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_201595|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##BC024205|TSHR|7253|thyroid stimulating hormone receptor##NM_000369|TSHR|7253|thyroid stimulating hormone receptor##NM_001018036|TSHR|7253|thyroid stimulating hormone receptor##NM_001142626|TSHR|7253|thyroid stimulating hormone receptor##M31774|TSHR|7253|thyroid stimulating hormone receptor##BC108653|TSHR|7253|thyroid stimulating hormone receptor##BC009237|TSHR|7253|thyroid stimulating hormone receptor##M73747|TSHR|7253|thyroid stimulating hormone receptor##M32215|TSHR|7253|thyroid stimulating hormone receptor##BC063613|TSHR|7253|thyroid stimulating hormone receptor##AB209207|TSHR|7253|thyroid stimulating hormone receptor##BC120972|TSHR|7253|thyroid stimulating hormone receptor##BC120973|TSHR|7253|thyroid stimulating hormone receptor##BC127628|TSHR|7253|thyroid stimulating hormone receptor##BC127629|TSHR|7253|thyroid stimulating hormone receptor##BC141970|TSHR|7253|thyroid stimulating hormone receptor##S49816|TSHR|7253|thyroid stimulating hormone receptor##AY429111|TSHR|7253|thyroid stimulating hormone receptor##S45272|TSHR|7253|thyroid stimulating hormone receptor##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)	0.025311	
chr2	135169676	135169793	reg1007493.p2	11.616	+	NM_002410 D17716 AF113921	-157849	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-843696	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-990380	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	306822	-	AK125008 NM_138326 BC016018 BC107420 AB071418	426484	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	506663	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.0	
chr5	180609061	180609183	reg1008480.p1	11.616	+	NM_206880	-27180	+	AK298113 TSC_hg19_v1_chr5_+_180467271 BC062459	-141807	+	NM_152547 TSC_hg19_v1_chr5_+_180467233 AK057097 AY358358	-141885	+	AF396655 NM_203297	18807	-	AF396652 AF396653 NM_203294 NM_203295 NM_203296	22217	-	DQ892585 DQ895803 BC080553 BC011567 AK314872 AF396651 AX776005 BC132863 BC132867 NM_033342 NM_203293 TSC_hg19_v1_chr5_-_180632192 AF220032	23079	-	NM_206880|OR2V2|285659|olfactory receptor, family 2, subfamily V, member 2##AK298113|BTNL9|153579|butyrophilin-like 9##BC062459|BTNL9|153579|butyrophilin-like 9##NM_152547|BTNL9|153579|butyrophilin-like 9##AK057097|BTNL9|153579|butyrophilin-like 9##AY358358|BTNL9|153579|butyrophilin-like 9##AF396655|TRIM7|81786|tripartite motif containing 7##NM_203297|TRIM7|81786|tripartite motif containing 7##AF396652|TRIM7|81786|tripartite motif containing 7##AF396653|TRIM7|81786|tripartite motif containing 7##NM_203294|TRIM7|81786|tripartite motif containing 7##NM_203295|TRIM7|81786|tripartite motif containing 7##NM_203296|TRIM7|81786|tripartite motif containing 7##DQ892585|TRIM7|81786|tripartite motif containing 7##DQ895803|TRIM7|81786|tripartite motif containing 7##BC080553|TRIM7|81786|tripartite motif containing 7##BC011567|TRIM7|81786|tripartite motif containing 7##AK314872|TRIM7|81786|tripartite motif containing 7##AF396651|TRIM7|81786|tripartite motif containing 7##BC132863|TRIM7|81786|tripartite motif containing 7##BC132867|TRIM7|81786|tripartite motif containing 7##NM_033342|TRIM7|81786|tripartite motif containing 7##NM_203293|TRIM7|81786|tripartite motif containing 7##AF220032|TRIM7|81786|tripartite motif containing 7	0.28864	CTCF.p2:-8:0.271
chr4	148511533	148511650	reg1007383.p1	11.615	+	TSC_hg19_v1_chr4_+_148402244 AK312812 BC022511 AK304451 S45956	-109281	+	TSC_hg19_v1_chr4_+_148402117 D90348 S57498 X61950	-109468	+	NM_001166055 NM_001957 AK315931 TSC_hg19_v1_chr4_+_148402083	-109516	+	TSC_hg19_v1_chr4_+_148538547 BC046128 NM_018241	26942	+	TSC_hg19_v1_chr4_+_148538568 AK001708	27015	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	93673	-	AK312812|EDNRA|1909|endothelin receptor type A##BC022511|EDNRA|1909|endothelin receptor type A##AK304451|EDNRA|1909|endothelin receptor type A##S45956|EDNRA|1909|endothelin receptor type A##D90348|EDNRA|1909|endothelin receptor type A##S57498|EDNRA|1909|endothelin receptor type A##X61950|EDNRA|1909|endothelin receptor type A##NM_001166055|EDNRA|1909|endothelin receptor type A##NM_001957|EDNRA|1909|endothelin receptor type A##AK315931|EDNRA|1909|endothelin receptor type A##BC046128|TMEM184C|55751|transmembrane protein 184C##NM_018241|TMEM184C|55751|transmembrane protein 184C##AK001708|TMEM184C|55751|transmembrane protein 184C##BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)	0.707779	CTCF.p2:28:0.708
chr5	171720620	171720739	reg1008760.p1	11.615	+	NM_152277 TSC_hg19_v1_chr5_-_171710808	-9864	-	BC019910 TSC_hg19_v1_chr5_-_171710765 AK313274	-9975	-	NM_001171183	-99504	+	AB430862 DQ109556 BC038561 TSC_hg19_v1_chr5_-_171881387	160692	-	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	160824	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	347574	+	NM_152277|UBTD2|92181|ubiquitin domain containing 2##BC019910|UBTD2|92181|ubiquitin domain containing 2##AK313274|UBTD2|92181|ubiquitin domain containing 2##NM_001171183|EFCAB9|285588|EF-hand calcium binding domain 9##AB430862|SH3PXD2B|285590|SH3 and PX domains 2B##DQ109556|SH3PXD2B|285590|SH3 and PX domains 2B##BC038561|SH3PXD2B|285590|SH3 and PX domains 2B##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)	0.994785	CTCF.p2:3:0.995
chr5	37413210	37413332	reg1006630.p1	11.614	+	TSC_hg19_v1_chr5_+_37379419 AL512685 BC009648 NM_018034 BC025315 AK001095	-33841	+	TSC_hg19_v1_chr5_+_37379386 AK310901 AK291179 BX537655	-33886	+	TSC_hg19_v1_chr5_-_37371206 AK297143	-42057	-	AJ001899 NM_199231	422321	-	AJ001897 AJ001898 NM_001190468 NM_001190469	422657	-	AF053748 NM_000514	426510	-	AL512685|WDR70|55100|WD repeat domain 70##BC009648|WDR70|55100|WD repeat domain 70##NM_018034|WDR70|55100|WD repeat domain 70##BC025315|WDR70|55100|WD repeat domain 70##AK001095|WDR70|55100|WD repeat domain 70##AK310901|WDR70|55100|WD repeat domain 70##AK291179|WDR70|55100|WD repeat domain 70##BX537655|WDR70|55100|WD repeat domain 70##AK297143|NUP155|9631|nucleoporin 155kDa##AJ001899|GDNF|2668|glial cell derived neurotrophic factor##NM_199231|GDNF|2668|glial cell derived neurotrophic factor##AJ001897|GDNF|2668|glial cell derived neurotrophic factor##AJ001898|GDNF|2668|glial cell derived neurotrophic factor##NM_001190468|GDNF|2668|glial cell derived neurotrophic factor##NM_001190469|GDNF|2668|glial cell derived neurotrophic factor##AF053748|GDNF|2668|glial cell derived neurotrophic factor##NM_000514|GDNF|2668|glial cell derived neurotrophic factor	0.926662	CTCF.p2:34:0.915
chr12	90496931	90497071	reg1008697.p1	11.613	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-393456	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-394314	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-447150	-	BC026075 BC024183 BC027600 BC034491 NM_152638	851950	-	U59111 TSC_hg19_v1_chr12_-_91398750	901746	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	901778	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.957331	CTCF.p2:13:0.957
chr10	112563723	112563873	reg1008661.p1	11.612	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-159669	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-219683	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-236306	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	67814	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	67916	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	114898	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.504251	CTCF.p2:-18:0.504
chr2	186603727	186603870	reg1006963.p1	11.612	+	NM_173651	-444	+	BC136602 TSC_hg19_v1_chr2_+_185463544	-1140306	+	BC142612 TSC_hg19_v1_chr2_+_185463319	-1140493	+	TSC_hg19_v1_chr2_+_187350986 AF220184 NM_018471 AK298615 AK001901 AK297658 AF289586	747132	+	TSC_hg19_v1_chr2_+_187351010 BC012336 AF161421 AF109366	747212	+	TSC_hg19_v1_chr2_+_187351051 BC021102 EU176353 AB587394 CU676824	747272	+	NM_173651|FSIP2|401024|fibrous sheath interacting protein 2##BC136602|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A##AF220184|ZC3H15|55854|zinc finger CCCH-type containing 15##NM_018471|ZC3H15|55854|zinc finger CCCH-type containing 15##AK298615|ZC3H15|55854|zinc finger CCCH-type containing 15##AK001901|ZC3H15|55854|zinc finger CCCH-type containing 15##AK297658|ZC3H15|55854|zinc finger CCCH-type containing 15##AF289586|ZC3H15|55854|zinc finger CCCH-type containing 15##BC012336|ZC3H15|55854|zinc finger CCCH-type containing 15##AF161421|ZC3H15|55854|zinc finger CCCH-type containing 15##AF109366|ZC3H15|55854|zinc finger CCCH-type containing 15##BC021102|ZC3H15|55854|zinc finger CCCH-type containing 15##EU176353|ZC3H15|55854|zinc finger CCCH-type containing 15	1.935273	CTCF.p2:-44:0.988	CTCF.p2:46:0.947
chr2	89179983	89180134	reg1006355.p1	11.612	+	S49006 TSC_hg19_v1_chr2_-_89165772	-14346	-	BX648045 TSC_hg19_v1_chr2_+_89065391 AL137717 BC031698	-114657	+	TSC_hg19_v1_chr2_+_88991190 NM_144563 AY050633 BC015529	-188843	+	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	5032	+	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	112355	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	262531	-	BX648045|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AL137717|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##BC031698|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##NM_144563|RPIA|22934|ribose 5-phosphate isomerase A##AY050633|RPIA|22934|ribose 5-phosphate isomerase A##BC015529|RPIA|22934|ribose 5-phosphate isomerase A##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus	0.995142	CTCF.p2:3:0.995
chr12	83021764	83021882	reg1007682.p1	11.611	+	NM_032230 TSC_hg19_v1_chr12_+_82752307 AK310231 AK026442 BC029120 CU688600	-269514	+	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	-269647	-	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	-868714	-	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	58877	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	59094	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	59438	+	NM_032230|C12orf26|84190|chromosome 12 open reading frame 26##AK310231|C12orf26|84190|chromosome 12 open reading frame 26##AK026442|C12orf26|84190|chromosome 12 open reading frame 26##BC029120|C12orf26|84190|chromosome 12 open reading frame 26##BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59##AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2	0.168546	
chr16	30933029	30933153	reg1008596.p1	11.611	+	BC064416 NM_001142544 NM_001330 U43030 TSC_hg19_v1_chr16_+_30907950 BC049822 BC036787	-25149	+	TSC_hg19_v1_chr16_-_30905474 BC058863	-27555	-	TSC_hg19_v1_chr16_-_30905377 BC019071 NM_004765	-27696	-	TSC_hg19_v1_chr16_-_30934469 BC101464 BC101988 BC105687 BC105926 AK092263 AX747439	1422	-	AK302669 NM_001099784	2804	+	TSC_hg19_v1_chr16_+_30937206 BC059173	4118	+	BC064416|CTF1|1489|cardiotrophin 1##NM_001142544|CTF1|1489|cardiotrophin 1##NM_001330|CTF1|1489|cardiotrophin 1##U43030|CTF1|1489|cardiotrophin 1##BC049822|CTF1|1489|cardiotrophin 1##BC036787|CTF1|1489|cardiotrophin 1##BC058863|BCL7C|9274|B-cell CLL/lymphoma 7C##BC019071|BCL7C|9274|B-cell CLL/lymphoma 7C##NM_004765|BCL7C|9274|B-cell CLL/lymphoma 7C##BC101464|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC101988|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC105687|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC105926|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##AK092263|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##AK302669|FBXL19|54620|F-box and leucine-rich repeat protein 19##NM_001099784|FBXL19|54620|F-box and leucine-rich repeat protein 19##BC059173|FBXL19|54620|F-box and leucine-rich repeat protein 19	0.040905	
chr20	8435050	8435186	reg1009937.p1	11.611	+	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	-322088	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-434646	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-434711	-	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	614565	+	AK307482 TSC_hg19_v1_chr20_+_9049806	614680	+	NM_182797 BC117458 BC143868	762940	+	AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4	0.0	
chr3	127814123	127814224	reg1007965.p2	11.609	+	TSC_hg19_v1_chr3_+_127771342 AB528869	-42807	+	TSC_hg19_v1_chr3_+_127771307 AF346602	-42851	+	TSC_hg19_v1_chr3_+_127771300 AL832821 BC002951 AF077032 AF084458	-42877	+	AB451224 AB451347 AB590226 BT007057 DQ469310 DQ891448 DQ894627 BC012886 TSC_hg19_v1_chr3_-_127842656 AB012122 AF099084 BC000519 BC002993 AF070735 AJ010058 AK222575 Y18418 AK222563 AK312290 NM_003707	28450	-	TSC_hg19_v1_chr3_+_127872314 NM_021937	58136	+	TSC_hg19_v1_chr3_+_127872325 BC007933 AF268872	58265	+	AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AL832821|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##BC002951|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF077032|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF084458|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AB451224|RUVBL1|8607|RuvB-like 1 (E. coli)##AB451347|RUVBL1|8607|RuvB-like 1 (E. coli)##BT007057|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ469310|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ891448|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ894627|RUVBL1|8607|RuvB-like 1 (E. coli)##BC012886|RUVBL1|8607|RuvB-like 1 (E. coli)##AB012122|RUVBL1|8607|RuvB-like 1 (E. coli)##AF099084|RUVBL1|8607|RuvB-like 1 (E. coli)##BC002993|RUVBL1|8607|RuvB-like 1 (E. coli)##AF070735|RUVBL1|8607|RuvB-like 1 (E. coli)##AJ010058|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222575|RUVBL1|8607|RuvB-like 1 (E. coli)##Y18418|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222563|RUVBL1|8607|RuvB-like 1 (E. coli)##AK312290|RUVBL1|8607|RuvB-like 1 (E. coli)##NM_003707|RUVBL1|8607|RuvB-like 1 (E. coli)##NM_021937|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##BC007933|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AF268872|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific	0.999101	CTCF.p2:-11:0.999
chr17	41387245	41387371	reg1009527.p1	11.608	+	TSC_hg19_v1_chr17_+_41363905 AK056132 AK290387 AK299974 AK301571 NM_145041	-23429	+	TSC_hg19_v1_chr17_+_41323230 AK299328 AK290005 AK297425 BC012591 X76952 NM_005899 BC009808 AY450308	-64086	+	TSC_hg19_v1_chr17_+_41322538 D30756 NM_031862 AF227189 NM_031858	-64815	+	AL832479 TSC_hg19_v1_chr17_-_41465694 AK123585 AK311685	78382	-	TSC_hg19_v1_chr17_+_41476360 NM_001661 AK314951 BC000043 AB060692 L38490	89059	+	AK294046 TSC_hg19_v1_chr17_+_41561351 BC020697 AK303319 D50487 NM_004941 AK291664	173989	+	AK056132|TMEM106A|113277|transmembrane protein 106A##AK290387|TMEM106A|113277|transmembrane protein 106A##AK299974|TMEM106A|113277|transmembrane protein 106A##AK301571|TMEM106A|113277|transmembrane protein 106A##NM_145041|TMEM106A|113277|transmembrane protein 106A##AK299328|NBR1|4077|neighbor of BRCA1 gene 1##AK290005|NBR1|4077|neighbor of BRCA1 gene 1##AK297425|NBR1|4077|neighbor of BRCA1 gene 1##X76952|NBR1|4077|neighbor of BRCA1 gene 1##NM_005899|NBR1|4077|neighbor of BRCA1 gene 1##BC009808|NBR1|4077|neighbor of BRCA1 gene 1##AY450308|NBR1|4077|neighbor of BRCA1 gene 1##D30756|NBR1|4077|neighbor of BRCA1 gene 1##NM_031862|NBR1|4077|neighbor of BRCA1 gene 1##AF227189|NBR1|4077|neighbor of BRCA1 gene 1##NM_031858|NBR1|4077|neighbor of BRCA1 gene 1##AL832479|LOC100130581|100130581|uncharacterized LOC100130581##AK123585|LOC100130581|100130581|uncharacterized LOC100130581##AK311685|LOC100130581|100130581|uncharacterized LOC100130581##NM_001661|ARL4D|379|ADP-ribosylation factor-like 4D##AK314951|ARL4D|379|ADP-ribosylation factor-like 4D##BC000043|ARL4D|379|ADP-ribosylation factor-like 4D##AB060692|ARL4D|379|ADP-ribosylation factor-like 4D##L38490|ARL4D|379|ADP-ribosylation factor-like 4D##AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	0.032469	
chr20	61854843	61854961	reg1006600.p1	11.608	+	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	-7379	-	BC137288 BC137308 NM_080606	-216516	-	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-270777	+	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	12439	+	TSC_hg19_v1_chr20_-_61884664 AK308958	29831	-	CU692040 AK126246 TSC_hg19_v1_chr20_-_61885841 BC041812 NM_152864	30944	-	BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7##AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4##AK126246|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4##BC041812|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4##NM_152864|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4	0.993304	CTCF.p2:-15:0.993
chr2	18033125	18033262	reg1009991.p1	11.608	+	NM_001105569	-35408	+	TSC_hg19_v1_chr2_+_17935407 CR936783 NM_001130009 AK093631 AX748233	-97782	+	TSC_hg19_v1_chr2_+_17935163 BC038243 NM_182625 AK131387	-98024	+	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	26761	+	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	708723	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	737617	-	NM_001105569|MSGN1|343930|mesogenin 1##CR936783|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##NM_001130009|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK093631|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##BC038243|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##NM_182625|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK131387|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB	0.403775	CTCF.p2:14:0.404
chr3	104315546	104315661	reg1007982.p1	11.608	+	AY090780 NM_175056 BC143817	-2161736	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-2747229	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-2768643	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	769977	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	770219	+	CR749655 TSC_hg19_v1_chr3_-_105421064	1105451	-	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.76658	CTCF.p2:3:0.767
chr4	89300115	89300237	reg1006580.p1	11.608	+	TSC_hg19_v1_chr4_+_89300147 AK092403 AX747525 BX647121	-10	+	AK295832 TSC_hg19_v1_chr4_+_89300006 BC042047	-179	+	TSC_hg19_v1_chr4_+_89299890 AF336798 AY653201 AY653202 AY653203 NM_001165136 NM_017912	-294	+	TSC_hg19_v1_chr4_+_89378269 AY337518 NM_016323 AB027289 BC140716	78146	+	TSC_hg19_v1_chr4_-_89444916 AB206972 BC007876 AK312082	144745	-	TSC_hg19_v1_chr4_-_89444931 NM_001042616 NM_032906	144776	-	AK092403|HERC6|55008|hect domain and RLD 6##BX647121|HERC6|55008|hect domain and RLD 6##AK295832|HERC6|55008|hect domain and RLD 6##BC042047|HERC6|55008|hect domain and RLD 6##AF336798|HERC6|55008|hect domain and RLD 6##AY653201|HERC6|55008|hect domain and RLD 6##AY653202|HERC6|55008|hect domain and RLD 6##AY653203|HERC6|55008|hect domain and RLD 6##NM_001165136|HERC6|55008|hect domain and RLD 6##NM_017912|HERC6|55008|hect domain and RLD 6##AY337518|HERC5|51191|hect domain and RLD 5##NM_016323|HERC5|51191|hect domain and RLD 5##AB027289|HERC5|51191|hect domain and RLD 5##BC140716|HERC5|51191|hect domain and RLD 5##AB206972|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##BC007876|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AK312082|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_001042616|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_032906|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y	0.262703	CTCF.p2:-10:0.227
chr12	32909277	32909412	reg1007319.p4	11.607	+	AF132939 CU677373 DQ893063 DQ896315 BC015625 TSC_hg19_v1_chr12_-_32908835 AK024057 AK026619 AK130935 NM_001040436	-503	-	TSC_hg19_v1_chr12_+_32832277 AF061795 AF151685 AB384831 CU692924 DQ891544 DQ894732 BC000136	-77021	+	TSC_hg19_v1_chr12_+_32832234 AK299926 AF000430 AK291094 AK293290 AK294533 AK298568 BC107763 AB209070 AB006965 BC024590	-77107	+	EU520483 EU520484 EU520485 EU520486 AB590796 HQ258660 TSC_hg19_v1_chr12_-_33049733 X97675 BC094762 BC126199 BC143966 BC143967 BC070083 NM_001005242 NM_004572	140391	-	BC101024 BC101025 TSC_hg19_v1_chr12_-_33592705 AY198413 NM_198992	683322	-	AJ312278 NM_032834	1265871	+	AF132939|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##DQ893063|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##DQ896315|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##BC015625|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK024057|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK026619|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK130935|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##NM_001040436|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AF061795|DNM1L|10059|dynamin 1-like##AF151685|DNM1L|10059|dynamin 1-like##DQ891544|DNM1L|10059|dynamin 1-like##DQ894732|DNM1L|10059|dynamin 1-like##AK299926|DNM1L|10059|dynamin 1-like##AF000430|DNM1L|10059|dynamin 1-like##AK291094|DNM1L|10059|dynamin 1-like##AK293290|DNM1L|10059|dynamin 1-like##AK294533|DNM1L|10059|dynamin 1-like##AK298568|DNM1L|10059|dynamin 1-like##BC107763|DNM1L|10059|dynamin 1-like##AB209070|DNM1L|10059|dynamin 1-like##AB006965|DNM1L|10059|dynamin 1-like##BC024590|DNM1L|10059|dynamin 1-like##EU520483|PKP2|5318|plakophilin 2##EU520484|PKP2|5318|plakophilin 2##EU520485|PKP2|5318|plakophilin 2##EU520486|PKP2|5318|plakophilin 2##HQ258660|PKP2|5318|plakophilin 2##X97675|PKP2|5318|plakophilin 2##BC094762|PKP2|5318|plakophilin 2##BC126199|PKP2|5318|plakophilin 2##BC143966|PKP2|5318|plakophilin 2##BC143967|PKP2|5318|plakophilin 2##BC070083|PKP2|5318|plakophilin 2##NM_001005242|PKP2|5318|plakophilin 2##NM_004572|PKP2|5318|plakophilin 2##BC101024|SYT10|341359|synaptotagmin X##BC101025|SYT10|341359|synaptotagmin X##AY198413|SYT10|341359|synaptotagmin X##NM_198992|SYT10|341359|synaptotagmin X##AJ312278|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_032834|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)	0.972927	CTCF.p2:-7:0.973
chr8	94987496	94987621	reg1008817.p1	11.607	+	NM_001161778 AB590483 TSC_hg19_v1_chr8_+_94930074 AK302651	-57523	+	NM_018444 TSC_hg19_v1_chr8_+_94929171 BC047619 NM_001161780 AK057079 NM_001161779 BC064978 AF155661 NM_001161781	-58378	+	AK308071 NM_001142301 NM_153704 AK092244 AX747428 TSC_hg19_v1_chr8_+_94767121 AK308735 BX648768 BC031220 BC017974 BC054338 AK094935 BC032835	-220444	+	U07969 BC112013 BC113464 TSC_hg19_v1_chr8_-_95220784 X83228 AK301001 NM_004063	233236	-	AK312873 NM_001144663	241972	-	U10550 TSC_hg19_v1_chr8_-_95274525	286964	-	NM_001161778|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK302651|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_018444|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC047619|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161780|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK057079|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161779|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC064978|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AF155661|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161781|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK308071|TMEM67|91147|transmembrane protein 67##NM_001142301|TMEM67|91147|transmembrane protein 67##NM_153704|TMEM67|91147|transmembrane protein 67##AK092244|TMEM67|91147|transmembrane protein 67##AK308735|TMEM67|91147|transmembrane protein 67##BX648768|TMEM67|91147|transmembrane protein 67##BC031220|TMEM67|91147|transmembrane protein 67##BC017974|TMEM67|91147|transmembrane protein 67##BC054338|TMEM67|91147|transmembrane protein 67##AK094935|TMEM67|91147|transmembrane protein 67##BC032835|TMEM67|91147|transmembrane protein 67##U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle	0.884985	CTCF.p2:10:0.885
chr1	27623328	27623453	reg1008989.p1	11.606	+	TSC_hg19_v1_chr1_+_27561153 BC032523	-62228	+	TSC_hg19_v1_chr1_+_27561124 AK315564	-62263	+	NM_015023 TSC_hg19_v1_chr1_+_27561056	-62356	+	TSC_hg19_v1_chr1_+_27648669 NM_032125 AK313110 AK303821	25261	+	AL136683 BC011579 BC090039 TSC_hg19_v1_chr1_+_27648745	25343	+	TSC_hg19_v1_chr1_+_27648756 EU831420 EU831513 AF251699 AK222642 AK307077 BX648289	25426	+	BC032523|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##NM_032125|TMEM222|84065|transmembrane protein 222##AK313110|TMEM222|84065|transmembrane protein 222##AK303821|TMEM222|84065|transmembrane protein 222##AL136683|TMEM222|84065|transmembrane protein 222##BC011579|TMEM222|84065|transmembrane protein 222##BC090039|TMEM222|84065|transmembrane protein 222##EU831420|TMEM222|84065|transmembrane protein 222##EU831513|TMEM222|84065|transmembrane protein 222##AF251699|TMEM222|84065|transmembrane protein 222##AK222642|TMEM222|84065|transmembrane protein 222##AK307077|TMEM222|84065|transmembrane protein 222##BX648289|LOC644961|644961|actin, beta pseudogene	0.996734	CTCF.p2:-28:0.997
chr11	46373802	46373908	reg1007078.p1	11.605	+	TSC_hg19_v1_chr11_+_46369117 NM_001199266 NM_001199267 NM_001199268 NM_003646 AK225774 U51477 BC041770 AK293615 AK294888 AK312398	-4831	+	TSC_hg19_v1_chr11_+_46367020 AK300577	-6819	+	TSC_hg19_v1_chr11_+_46366983 AK123378 BX648433	-6871	+	TSC_hg19_v1_chr11_+_46383155 NM_001105540 U94905	9280	+	AK309963 AK308210 TSC_hg19_v1_chr11_+_46402507 AK130889 NM_001012334	28620	+	TSC_hg19_v1_chr11_+_46403232 DQ323888 DQ323889 DQ323890 NM_002391	29365	+	NM_001199266|DGKZ|8525|diacylglycerol kinase, zeta##NM_001199267|DGKZ|8525|diacylglycerol kinase, zeta##NM_001199268|DGKZ|8525|diacylglycerol kinase, zeta##NM_003646|DGKZ|8525|diacylglycerol kinase, zeta##AK225774|DGKZ|8525|diacylglycerol kinase, zeta##U51477|DGKZ|8525|diacylglycerol kinase, zeta##BC041770|DGKZ|8525|diacylglycerol kinase, zeta##AK293615|DGKZ|8525|diacylglycerol kinase, zeta##AK294888|DGKZ|8525|diacylglycerol kinase, zeta##AK312398|DGKZ|8525|diacylglycerol kinase, zeta##AK300577|DGKZ|8525|diacylglycerol kinase, zeta##AK123378|DGKZ|8525|diacylglycerol kinase, zeta##BX648433|DGKZ|8525|diacylglycerol kinase, zeta##NM_001105540|DGKZ|8525|diacylglycerol kinase, zeta##U94905|DGKZ|8525|diacylglycerol kinase, zeta##AK309963|MDK|4192|midkine (neurite growth-promoting factor 2)##AK308210|MDK|4192|midkine (neurite growth-promoting factor 2)##AK130889|MDK|4192|midkine (neurite growth-promoting factor 2)##NM_001012334|MDK|4192|midkine (neurite growth-promoting factor 2)##DQ323888|MDK|4192|midkine (neurite growth-promoting factor 2)##DQ323889|MDK|4192|midkine (neurite growth-promoting factor 2)##DQ323890|MDK|4192|midkine (neurite growth-promoting factor 2)##NM_002391|MDK|4192|midkine (neurite growth-promoting factor 2)	0.795667	CTCF.p2:-1:0.784
chr15	99620039	99620184	reg1009788.p1	11.603	+	AK058162 NM_001167902	-69088	-	BC104743 BC104744 BC105686 NM_001102612	-71274	-	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-427355	+	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	25129	+	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	169595	-	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	171305	-	AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23	0.43001	CTCF.p2:18:0.430
chr19	17190992	17191164	reg1007026.p4	11.603	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-4485	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-4757	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-53538	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	135094	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	135127	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	145956	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.0	
chr5	149501852	149501969	reg1009449.p1	11.602	+	NM_005211 X03663	-8976	-	TSC_hg19_v1_chr5_-_149466188 BC047521 AK304491 M25786	-35677	-	TSC_hg19_v1_chr5_-_149466131 AB208819	-35764	-	M21616 TSC_hg19_v1_chr5_-_149535251 AK293093	33294	-	J03278 M30493 TSC_hg19_v1_chr5_-_149535344	33425	-	BC032224 AB209657 NM_002609 TSC_hg19_v1_chr5_-_149535428	33514	-	NM_005211|CSF1R|1436|colony stimulating factor 1 receptor##X03663|CSF1R|1436|colony stimulating factor 1 receptor##BC047521|CSF1R|1436|colony stimulating factor 1 receptor##AK304491|CSF1R|1436|colony stimulating factor 1 receptor##M25786|CSF1R|1436|colony stimulating factor 1 receptor##AB208819|CSF1R|1436|colony stimulating factor 1 receptor##M21616|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AK293093|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##J03278|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##M30493|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##BC032224|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AB209657|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##NM_002609|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide	0.0	
chr13	86380805	86380937	reg1010021.p1	11.601	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-7432	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-1924371	-	TSC_hg19_v1_chr13_-_84456424 BC051738	-1924446	-	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	1943998	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	5670033	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	7498556	+	BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6	0.97944	CTCF.p2:28:0.979
chr5	31825737	31825863	reg1009359.p1	11.601	+	NM_178140	-26770	+	TSC_hg19_v1_chr5_+_31639424 AB002298	-186330	+	NM_018356 TSC_hg19_v1_chr5_+_31532398 BC032845 AK299156 AK002055 BC021215 AB527598	-293365	+	TSC_hg19_v1_chr5_+_32173523 AK055939	347716	+	TSC_hg19_v1_chr5_-_32174291 AJ296152	348468	-	TSC_hg19_v1_chr5_-_32174327 BC063586	348540	-	NM_178140|PDZD2|23037|PDZ domain containing 2##AB002298|PDZD2|23037|PDZ domain containing 2##NM_018356|C5orf22|55322|chromosome 5 open reading frame 22##BC032845|C5orf22|55322|chromosome 5 open reading frame 22##AK299156|C5orf22|55322|chromosome 5 open reading frame 22##AK002055|C5orf22|55322|chromosome 5 open reading frame 22##BC021215|C5orf22|55322|chromosome 5 open reading frame 22##AK055939|LOC153546|153546|uncharacterized LOC153546##AJ296152|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##BC063586|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)	0.971859	CTCF.p2:-11:0.928
chr7	48031450	48031566	reg1007539.p1	11.601	+	TSC_hg19_v1_chr7_-_48019247 NM_004507	-12279	-	BT019481 BT019482 CR536552 Y16893 AB463759 BC007013 TSC_hg19_v1_chr7_-_48019149 AK294117 AK290459 AF076844 AF110393	-12356	-	AB061683 NM_138295	-43455	-	AK302011 BC026189 AF429967 NM_001030019 NM_152782	37171	-	BC045737 BC031107 NM_001100159	43603	+	TSC_hg19_v1_chr7_+_48128282 BC007348 NM_181597	96781	+	NM_004507|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BT019481|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BT019482|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##CR536552|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##Y16893|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BC007013|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK294117|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK290459|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF076844|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF110393|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AB061683|PKD1L1|168507|polycystic kidney disease 1 like 1##NM_138295|PKD1L1|168507|polycystic kidney disease 1 like 1##AK302011|SUN3|256979|Sad1 and UNC84 domain containing 3##BC026189|SUN3|256979|Sad1 and UNC84 domain containing 3##AF429967|SUN3|256979|Sad1 and UNC84 domain containing 3##NM_001030019|SUN3|256979|Sad1 and UNC84 domain containing 3##NM_152782|SUN3|256979|Sad1 and UNC84 domain containing 3##BC045737|C7orf57|136288|chromosome 7 open reading frame 57##BC031107|C7orf57|136288|chromosome 7 open reading frame 57##NM_001100159|C7orf57|136288|chromosome 7 open reading frame 57##BC007348|UPP1|7378|uridine phosphorylase 1##NM_181597|UPP1|7378|uridine phosphorylase 1	0.841402	CTCF.p2:-4:0.841
chr16	50699392	50699511	reg1007441.p1	11.600	+	TSC_hg19_v1_chr16_-_50647562 AK124375	-51873	-	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	-117125	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	-296621	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	15726	-	TSC_hg19_v1_chr16_-_50715246 NM_001144972 NM_153337 NM_182854	15850	-	AF178930 AY187243 NM_022162 AY187244 AY187246 AB527390	31650	+	BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20##NM_001144972|SNX20|124460|sorting nexin 20##NM_153337|SNX20|124460|sorting nexin 20##NM_182854|SNX20|124460|sorting nexin 20##AF178930|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187243|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_022162|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187244|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187246|NOD2|64127|nucleotide-binding oligomerization domain containing 2	0.992524	CTCF.p2:17:0.993
chrX	35399060	35399187	reg1008191.p1	11.600	+	BC035026 NM_152631 AK093101 AX747923 CU690032	-438194	+	TSC_hg19_v1_chrX_-_34675406 BC039242 NM_031442	-723715	-	BC026171 AK292354 NM_203408	-1248687	-	NM_001099921	417335	+	NM_152632 AK126295 BC027936 CU693328	538759	+	AK093920 AX748365 NM_173695	665929	+	BC035026|FAM47B|170062|family with sequence similarity 47, member B##NM_152631|FAM47B|170062|family with sequence similarity 47, member B##AK093101|FAM47B|170062|family with sequence similarity 47, member B##BC039242|TMEM47|83604|transmembrane protein 47##NM_031442|TMEM47|83604|transmembrane protein 47##BC026171|FAM47A|158724|family with sequence similarity 47, member A##AK292354|FAM47A|158724|family with sequence similarity 47, member A##NM_203408|FAM47A|158724|family with sequence similarity 47, member A##NM_001099921|MAGEB16|139604|melanoma antigen family B, 16##NM_152632|CXorf22|170063|chromosome X open reading frame 22##AK126295|CXorf22|170063|chromosome X open reading frame 22##BC027936|CXorf22|170063|chromosome X open reading frame 22##AK093920|CXorf59|286464|chromosome X open reading frame 59##NM_173695|CXorf59|286464|chromosome X open reading frame 59	0.982656	CTCF.p2:-6:0.983
chr13	45883679	45883803	reg1007487.p2	11.599	+	AK290675 NM_198404	-108567	-	TSC_hg19_v1_chr13_+_45694647 BC001771 X16901 AB527978 EU831971 EU832064 BT019525 X59745	-189023	+	TSC_hg19_v1_chr13_+_45694638 NM_004128 AK291545	-189127	+	TSC_hg19_v1_chr13_-_45914246 L13806 CU692614	30541	-	AY334563 CR457036 CU680324 TSC_hg19_v1_chr13_-_45915253	31496	-	BC012431 TSC_hg19_v1_chr13_-_45915280 X64899 BC040008 NM_003295 X16064 AF072098 BC007842 BC003352 BC052333	31551	-	AK290675|KCTD4|386618|potassium channel tetramerisation domain containing 4##NM_198404|KCTD4|386618|potassium channel tetramerisation domain containing 4##BC001771|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##X16901|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##EU831971|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##EU832064|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##BT019525|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##X59745|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##L13806|TPT1|7178|tumor protein, translationally-controlled 1##AY334563|TPT1|7178|tumor protein, translationally-controlled 1##CR457036|TPT1|7178|tumor protein, translationally-controlled 1##BC012431|TPT1|7178|tumor protein, translationally-controlled 1##X64899|TPT1|7178|tumor protein, translationally-controlled 1##BC040008|TPT1|7178|tumor protein, translationally-controlled 1##NM_003295|TPT1|7178|tumor protein, translationally-controlled 1##X16064|TPT1|7178|tumor protein, translationally-controlled 1##BC007842|TPT1|7178|tumor protein, translationally-controlled 1##BC003352|TPT1|7178|tumor protein, translationally-controlled 1##BC052333|TPT1|7178|tumor protein, translationally-controlled 1	0.896775	CTCF.p2:9:0.884
chr19	39005864	39005967	reg1006952.p1	11.599	+	TSC_hg19_v1_chr19_+_38924330 NM_000540 NM_001042723 J05200	-81571	+	AF448437 BC146669 BC150202 BC142721 BC151216 TSC_hg19_v1_chr19_-_38916860 AX721071 AY048119 AY048120 AY048121 FJ768677 FJ768678 FJ768679 FJ768680 FJ768681 FJ768682 NM_001146202 NM_001146203 NM_001146204 NM_001146205 NM_001146206 NM_001146207 NM_170604	-89043	-	TSC_hg19_v1_chr19_+_38893839 BC080606 AK128745	-112014	+	AB527182 TSC_hg19_v1_chr19_-_39108593 NM_001042600 NM_007181	102673	-	TSC_hg19_v1_chr19_+_39109725 NM_013234 AF077051 AF085358 AB019392 AY245432	103798	+	TSC_hg19_v1_chr19_+_39109825 BC007559 AK298635	103901	+	NM_000540|RYR1|6261|ryanodine receptor 1 (skeletal)##NM_001042723|RYR1|6261|ryanodine receptor 1 (skeletal)##J05200|RYR1|6261|ryanodine receptor 1 (skeletal)##AF448437|RASGRP4|115727|RAS guanyl releasing protein 4##BC146669|RASGRP4|115727|RAS guanyl releasing protein 4##BC150202|RASGRP4|115727|RAS guanyl releasing protein 4##BC142721|RASGRP4|115727|RAS guanyl releasing protein 4##BC151216|RASGRP4|115727|RAS guanyl releasing protein 4##AY048119|RASGRP4|115727|RAS guanyl releasing protein 4##AY048120|RASGRP4|115727|RAS guanyl releasing protein 4##AY048121|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768677|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768678|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768679|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768680|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768681|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768682|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146202|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146203|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146204|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146205|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146206|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146207|RASGRP4|115727|RAS guanyl releasing protein 4##NM_170604|RASGRP4|115727|RAS guanyl releasing protein 4##BC080606|FAM98C|147965|family with sequence similarity 98, member C##AK128745|FAM98C|147965|family with sequence similarity 98, member C##NM_001042600|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_007181|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_013234|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF077051|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF085358|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AB019392|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AY245432|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##BC007559|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK298635|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K	0.26294	CTCF.p2:-17:0.263
chr21	17702779	17702933	reg1010367.p1	11.599	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	-600315	+	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	-600531	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	-1265639	-	TSC_hg19_v1_chr21_+_18885168 NM_001207063 NM_001207064 NM_001207065 NM_001207066 NM_001338	1182307	+	TSC_hg19_v1_chr21_+_18885364 BC003684 AK313526 BC010536 Y07593 DQ891181 DQ894363 AF124598 AY072910 AY072911 AY072912 BT019876 GU474812 U90716	1182515	+	D64110 TSC_hg19_v1_chr21_-_18985177 BC011957	1282284	-	NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor##BC003684|CXADR|1525|coxsackie virus and adenovirus receptor##AK313526|CXADR|1525|coxsackie virus and adenovirus receptor##BC010536|CXADR|1525|coxsackie virus and adenovirus receptor##Y07593|CXADR|1525|coxsackie virus and adenovirus receptor##DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor##DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor##AF124598|CXADR|1525|coxsackie virus and adenovirus receptor##AY072910|CXADR|1525|coxsackie virus and adenovirus receptor##AY072911|CXADR|1525|coxsackie virus and adenovirus receptor##AY072912|CXADR|1525|coxsackie virus and adenovirus receptor##BT019876|CXADR|1525|coxsackie virus and adenovirus receptor##GU474812|CXADR|1525|coxsackie virus and adenovirus receptor##U90716|CXADR|1525|coxsackie virus and adenovirus receptor##D64110|BTG3|10950|BTG family, member 3##BC011957|BTG3|10950|BTG family, member 3	0.998762	CTCF.p2:-2:0.999
chr4	87417382	87417527	reg1009756.p1	11.599	+	NM_002753 U07620 BC051731 AK225974 TSC_hg19_v1_chr4_-_87374361	-43131	-	NM_138980 NM_138982	-136080	-	BC022492 TSC_hg19_v1_chr4_-_87281197 BC035057	-136258	-	TSC_hg19_v1_chr4_+_87515468 AK056151 NM_006264 NM_080683 NM_080684 NM_080685 BC139915 U12132 U12129 U12130	98019	+	AJ583502 BC107051 BC107052 EF437223 NM_197965	352887	-	BC016746 BC063410 NM_144645	396106	-	NM_002753|MAPK10|5602|mitogen-activated protein kinase 10##U07620|MAPK10|5602|mitogen-activated protein kinase 10##BC051731|MAPK10|5602|mitogen-activated protein kinase 10##AK225974|MAPK10|5602|mitogen-activated protein kinase 10##NM_138980|MAPK10|5602|mitogen-activated protein kinase 10##NM_138982|MAPK10|5602|mitogen-activated protein kinase 10##BC022492|MAPK10|5602|mitogen-activated protein kinase 10##BC035057|MAPK10|5602|mitogen-activated protein kinase 10##AK056151|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_006264|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080683|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080684|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080685|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##BC139915|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##U12132|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##U12129|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##AJ583502|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC107051|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC107052|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##EF437223|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##NM_197965|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC016746|C4orf36|132989|chromosome 4 open reading frame 36##BC063410|C4orf36|132989|chromosome 4 open reading frame 36##NM_144645|C4orf36|132989|chromosome 4 open reading frame 36	0.981538	CTCF.p2:-8:0.982
chr8	59521249	59521360	reg1008293.p2	11.599	+	TSC_hg19_v1_chr8_+_59465819 AK298697 AK312274 BC013254	-55475	+	TSC_hg19_v1_chr8_+_59465816 AF006636 AK295198 AK128645	-55497	+	BC113674 BC113676 BC143915 BC143916 TSC_hg19_v1_chr8_+_59465795 AK300647	-55515	+	TSC_hg19_v1_chr8_-_59572096 AK294009 NM_001144772 AK304884	50749	-	TSC_hg19_v1_chr8_-_59572189 X96586	50910	-	TSC_hg19_v1_chr8_-_59572336 AK292679 AK313991	51009	-	AK298697|SDCBP|6386|syndecan binding protein (syntenin)##AK312274|SDCBP|6386|syndecan binding protein (syntenin)##BC013254|SDCBP|6386|syndecan binding protein (syntenin)##AF006636|SDCBP|6386|syndecan binding protein (syntenin)##AK295198|SDCBP|6386|syndecan binding protein (syntenin)##AK128645|SDCBP|6386|syndecan binding protein (syntenin)##BC113674|SDCBP|6386|syndecan binding protein (syntenin)##BC113676|SDCBP|6386|syndecan binding protein (syntenin)##BC143915|SDCBP|6386|syndecan binding protein (syntenin)##BC143916|SDCBP|6386|syndecan binding protein (syntenin)##AK300647|SDCBP|6386|syndecan binding protein (syntenin)##AK294009|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##NM_001144772|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##X96586|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##AK292679|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##AK313991|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor	0.95102	CTCF.p2:6:0.951
chr11	74851705	74851838	reg1009400.p1	11.598	+	NM_001005285 BC136958 BC136959	-50994	-	TSC_hg19_v1_chr11_+_74699955 NM_006656 AK022450 AK290442 AK303540	-151807	+	TSC_hg19_v1_chr11_+_74660321 BC064957 BC106066 AB587348 CU687980 D14658	-191431	+	NM_001145212 NM_007256 FM209050 TSC_hg19_v1_chr11_+_74862151 AK304783 AK302492 AK290234 AK300134 AB020687 BC127254 BC041095 AB026256 AL117465	10373	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	19070	+	NM_001195528	100178	+	NM_001005285|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##BC136958|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##BC136959|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##NM_006656|NEU3|10825|sialidase 3 (membrane sialidase)##AK022450|NEU3|10825|sialidase 3 (membrane sialidase)##AK290442|NEU3|10825|sialidase 3 (membrane sialidase)##AK303540|NEU3|10825|sialidase 3 (membrane sialidase)##BC064957|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##BC106066|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##D14658|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##NM_001145212|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_007256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209050|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK304783|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK302492|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK290234|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK300134|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB020687|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC127254|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC041095|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB026256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AL117465|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050	0.999811	CTCF.p2:-6:1.000
chr15	76013536	76013663	reg1010104.p1	11.597	+	TSC_hg19_v1_chr15_-_76005190 NM_001897	-8404	-	AB462981 AY359468 X96753 TSC_hg19_v1_chr15_-_76005157	-8471	-	BC018775 NM_153271 AL833039 EF219141 DQ891695 DQ895211 EU831407 EU831499	-72205	+	TSC_hg19_v1_chr15_+_76016306 BC039862 NM_175881	2715	+	TSC_hg19_v1_chr15_-_76030959 AK091244	17370	-	NM_173469 TSC_hg19_v1_chr15_+_76135647 AK000617	122036	+	NM_001897|CSPG4|1464|chondroitin sulfate proteoglycan 4##AY359468|CSPG4|1464|chondroitin sulfate proteoglycan 4##X96753|CSPG4|1464|chondroitin sulfate proteoglycan 4##BC018775|SNX33|257364|sorting nexin 33##NM_153271|SNX33|257364|sorting nexin 33##AL833039|SNX33|257364|sorting nexin 33##EF219141|SNX33|257364|sorting nexin 33##DQ891695|SNX33|257364|sorting nexin 33##DQ895211|SNX33|257364|sorting nexin 33##EU831407|SNX33|257364|sorting nexin 33##EU831499|SNX33|257364|sorting nexin 33##BC039862|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_175881|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##AK091244|DNM1P35|100128285|DNM1 pseudogene 35##NM_173469|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK000617|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2	0.965016	CTCF.p2:-6:0.518	CTCF.p2:-10:0.433
chr17	19372808	19372925	reg1009103.p1	11.597	+	AK309372 NM_007148 AK313844 AK226052 BC038896 BC053989 AB026054 AB590107 EU446727	-58262	+	L38486 TSC_hg19_v1_chr17_-_19290504 BC047725 AK293056 AK304528 NM_001198695 NM_002404	-82365	-	TSC_hg19_v1_chr17_+_19282061 AY534741 AB527827 HQ257997	-90731	+	AK301854 TSC_hg19_v1_chr17_+_19437179 AK222625 AK001709 AK302620 NM_018242 BC022390 AK225360 BC010661 BC058882 BC050592 CU691318	64328	+	U46689 TSC_hg19_v1_chr17_+_19552087 NM_000382 NM_001031806 AK292381 L47162 AK025677 AK315096 BC002430 DQ895880 EU176377 CR457422 AB208894	179277	+	BC062614 AB250364 AB250701 BC035288 BC050578 AK055758 AK307647 NM_001099646 NM_152908	247094	-	AK309372|RNF112|7732|ring finger protein 112##NM_007148|RNF112|7732|ring finger protein 112##AK313844|RNF112|7732|ring finger protein 112##AK226052|RNF112|7732|ring finger protein 112##BC038896|RNF112|7732|ring finger protein 112##BC053989|RNF112|7732|ring finger protein 112##AB026054|RNF112|7732|ring finger protein 112##EU446727|RNF112|7732|ring finger protein 112##L38486|MFAP4|4239|microfibrillar-associated protein 4##BC047725|MFAP4|4239|microfibrillar-associated protein 4##AK293056|MFAP4|4239|microfibrillar-associated protein 4##AK304528|MFAP4|4239|microfibrillar-associated protein 4##NM_001198695|MFAP4|4239|microfibrillar-associated protein 4##NM_002404|MFAP4|4239|microfibrillar-associated protein 4##AY534741|MAPK7|5598|mitogen-activated protein kinase 7##HQ257997|MAPK7|5598|mitogen-activated protein kinase 7##AK301854|SLC47A1|55244|solute carrier family 47, member 1##AK222625|SLC47A1|55244|solute carrier family 47, member 1##AK001709|SLC47A1|55244|solute carrier family 47, member 1##AK302620|SLC47A1|55244|solute carrier family 47, member 1##NM_018242|SLC47A1|55244|solute carrier family 47, member 1##AK225360|SLC47A1|55244|solute carrier family 47, member 1##BC010661|SLC47A1|55244|solute carrier family 47, member 1##BC058882|SLC47A1|55244|solute carrier family 47, member 1##BC050592|SLC47A1|55244|solute carrier family 47, member 1##U46689|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_000382|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_001031806|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK292381|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##L47162|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK025677|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK315096|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC002430|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##DQ895880|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##EU176377|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##CR457422|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AB208894|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC062614|SLC47A2|146802|solute carrier family 47, member 2##AB250364|SLC47A2|146802|solute carrier family 47, member 2##AB250701|SLC47A2|146802|solute carrier family 47, member 2##BC035288|SLC47A2|146802|solute carrier family 47, member 2##BC050578|SLC47A2|146802|solute carrier family 47, member 2##AK055758|SLC47A2|146802|solute carrier family 47, member 2##AK307647|SLC47A2|146802|solute carrier family 47, member 2##NM_001099646|SLC47A2|146802|solute carrier family 47, member 2##NM_152908|SLC47A2|146802|solute carrier family 47, member 2	0.910727	CTCF.p2:-10:0.911
chr2	105852206	105852329	reg1007673.p2	11.597	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	-197753	+	TSC_hg19_v1_chr2_+_105471877 NM_006236	-380369	+	TSC_hg19_v1_chr2_-_105467912 AK096498	-384351	-	BC066879 BC066880 BC067455 NM_007227 CU688176 EU883573	5990	+	TSC_hg19_v1_chr2_-_105946156 BC020548 BC010093 NM_001142621 NM_004257	93885	-	AK304268 TSC_hg19_v1_chr2_+_105953980 AK307891	101643	+	NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9##NM_006236|POU3F3|5455|POU class 3 homeobox 3##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##BC066879|GPR45|11250|G protein-coupled receptor 45##BC066880|GPR45|11250|G protein-coupled receptor 45##BC067455|GPR45|11250|G protein-coupled receptor 45##NM_007227|GPR45|11250|G protein-coupled receptor 45##EU883573|GPR45|11250|G protein-coupled receptor 45##BC020548|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_001142621|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_004257|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##AK304268|C2orf49|79074|chromosome 2 open reading frame 49##AK307891|C2orf49|79074|chromosome 2 open reading frame 49	0.867557	CTCF.p2:7:0.868
chr4	171059888	171060024	reg1009657.p1	11.597	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-48542	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-48758	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-112451	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	1674688	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	3029996	+	BC043556 TSC_hg19_v1_chr4_-_174090314	3030354	-	BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.747554	CTCF.p2:-19:0.748
chr7	112136020	112136157	reg1010127.p1	11.597	+	NM_001134468 BC031976 AK096894 NM_182597	-15102	+	NM_001197079	-43976	+	TSC_hg19_v1_chr7_+_112090514 NM_001550 AK225222 BC001272 Y10313 AK297509 AB527574 BT019889 BT019890 CU674634	-45485	+	AK293311 TSC_hg19_v1_chr7_-_112430447 AK314460 AL136626 AK025482 NM_022484	294355	-	AL834437 AK299901 TSC_hg19_v1_chr7_-_112579931 BC114615 AK056380 NM_152556	443742	-	AK297464 AK312587 NM_001146266 AL161959 NM_001146267 TSC_hg19_v1_chr7_-_112726667	590407	-	NM_001134468|C7orf53|286006|chromosome 7 open reading frame 53##BC031976|C7orf53|286006|chromosome 7 open reading frame 53##AK096894|C7orf53|286006|chromosome 7 open reading frame 53##NM_182597|C7orf53|286006|chromosome 7 open reading frame 53##NM_001197079|IFRD1|3475|interferon-related developmental regulator 1##NM_001550|IFRD1|3475|interferon-related developmental regulator 1##AK225222|IFRD1|3475|interferon-related developmental regulator 1##BC001272|IFRD1|3475|interferon-related developmental regulator 1##AK297509|IFRD1|3475|interferon-related developmental regulator 1##BT019889|IFRD1|3475|interferon-related developmental regulator 1##BT019890|IFRD1|3475|interferon-related developmental regulator 1##AK293311|TMEM168|64418|transmembrane protein 168##AK314460|TMEM168|64418|transmembrane protein 168##AL136626|TMEM168|64418|transmembrane protein 168##AK025482|TMEM168|64418|transmembrane protein 168##NM_022484|TMEM168|64418|transmembrane protein 168##AL834437|C7orf60|154743|chromosome 7 open reading frame 60##AK299901|C7orf60|154743|chromosome 7 open reading frame 60##BC114615|C7orf60|154743|chromosome 7 open reading frame 60##AK056380|C7orf60|154743|chromosome 7 open reading frame 60##NM_152556|C7orf60|154743|chromosome 7 open reading frame 60##AK297464|GPR85|54329|G protein-coupled receptor 85##AK312587|GPR85|54329|G protein-coupled receptor 85##NM_001146266|GPR85|54329|G protein-coupled receptor 85##AL161959|GPR85|54329|G protein-coupled receptor 85##NM_001146267|GPR85|54329|G protein-coupled receptor 85	0.406779	CTCF.p2:6:0.261
chr1	153793913	153794040	reg1009776.p1	11.595	+	BC003041 BC009916 NM_024330 AK075377 TSC_hg19_v1_chr1_+_153747897 AK123997 AY358409 AK074134 DQ893429 DQ895951 AK027499 BC029792	-46110	+	TSC_hg19_v1_chr1_+_153700548 BX640950 CR749376 CR627233 BC116458 AK290025 CR749212 BX640786 NM_023015	-93423	+	TSC_hg19_v1_chr1_+_153651222 BC063304 AK025024 NM_000906 X15357	-142680	+	AK094665 NM_020699 TSC_hg19_v1_chr1_-_153895452	101475	-	TSC_hg19_v1_chr1_-_153919148 AB007945 NM_014856	125170	-	AY726597 AK096382 BC053562 TSC_hg19_v1_chr1_-_153931074 AF289574	137017	-	BC003041|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC009916|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##NM_024330|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK075377|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK123997|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AY358409|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK074134|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ893429|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ895951|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK027499|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC029792|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BX640950|INTS3|65123|integrator complex subunit 3##CR749376|INTS3|65123|integrator complex subunit 3##CR627233|INTS3|65123|integrator complex subunit 3##BC116458|INTS3|65123|integrator complex subunit 3##AK290025|INTS3|65123|integrator complex subunit 3##CR749212|INTS3|65123|integrator complex subunit 3##BX640786|INTS3|65123|integrator complex subunit 3##NM_023015|INTS3|65123|integrator complex subunit 3##BC063304|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##AK025024|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##NM_000906|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##X15357|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B##NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B##AB007945|DENND4B|9909|DENN/MADD domain containing 4B##NM_014856|DENND4B|9909|DENN/MADD domain containing 4B##AY726597|CRTC2|200186|CREB regulated transcription coactivator 2##AK096382|CRTC2|200186|CREB regulated transcription coactivator 2##BC053562|CRTC2|200186|CREB regulated transcription coactivator 2##AF289574|CRTC2|200186|CREB regulated transcription coactivator 2	0.635026	CTCF.p2:2:0.635
chr20	33857197	33857322	reg1008633.p1	11.595	+	AB021227 NM_006690 AF131284 DQ300264 BC047614	-42691	+	AK314887 NM_006404 BC014451 X89079 L35545 CR456948 DQ892834 DQ896081	-97394	+	CR457266 CU674674 TSC_hg19_v1_chr20_-_33735112 BC016184 AK300212 AY358580 BC001371 AK023931 AK303816 AK001645 NM_001145025 NM_018217	-122135	-	TSC_hg19_v1_chr20_-_33865907 AK296878	8693	-	CR456764 AB463619 DQ892592 DQ895811 TSC_hg19_v1_chr20_-_33872363 AF022229	15081	-	NM_181468 TSC_hg19_v1_chr20_-_33872566 AB062289 BC019305 Y11435 AK296076 BC095465 BC011845	15278	-	AB021227|MMP24|10893|matrix metallopeptidase 24 (membrane-inserted)##NM_006690|MMP24|10893|matrix metallopeptidase 24 (membrane-inserted)##AF131284|MMP24|10893|matrix metallopeptidase 24 (membrane-inserted)##DQ300264|MMP24|10893|matrix metallopeptidase 24 (membrane-inserted)##BC047614|MMP24|10893|matrix metallopeptidase 24 (membrane-inserted)##AK314887|PROCR|10544|protein C receptor, endothelial##NM_006404|PROCR|10544|protein C receptor, endothelial##BC014451|PROCR|10544|protein C receptor, endothelial##X89079|PROCR|10544|protein C receptor, endothelial##L35545|PROCR|10544|protein C receptor, endothelial##CR456948|PROCR|10544|protein C receptor, endothelial##DQ892834|PROCR|10544|protein C receptor, endothelial##DQ896081|PROCR|10544|protein C receptor, endothelial##CR457266|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##BC016184|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK300212|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AY358580|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##BC001371|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK023931|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK303816|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK001645|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##NM_001145025|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##NM_018217|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK296878|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##CR456764|EIF6|3692|eukaryotic translation initiation factor 6##DQ892592|EIF6|3692|eukaryotic translation initiation factor 6##DQ895811|EIF6|3692|eukaryotic translation initiation factor 6##AF022229|EIF6|3692|eukaryotic translation initiation factor 6##NM_181468|EIF6|3692|eukaryotic translation initiation factor 6##AB062289|EIF6|3692|eukaryotic translation initiation factor 6##BC019305|EIF6|3692|eukaryotic translation initiation factor 6##Y11435|EIF6|3692|eukaryotic translation initiation factor 6##AK296076|EIF6|3692|eukaryotic translation initiation factor 6##BC095465|EIF6|3692|eukaryotic translation initiation factor 6##BC011845|EIF6|3692|eukaryotic translation initiation factor 6	0.987081	CTCF.p2:3:0.987
chrX	114969456	114969605	reg1006783.p1	11.593	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-141662	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-172488	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-173924	+	BC003645 TSC_hg19_v1_chrX_-_115085443	115909	-	AK313927 NM_000686 X87723 U16957	332465	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	598237	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:4:0.429
chr18	59303165	59303286	reg1009956.p1	11.592	+	AF217289 BC101047 BC101048 BC101049 NM_031891	-145451	+	AK314130 NM_005912	-1263225	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-1735996	+	AK096495 NM_173557	257078	-	AF109219 TSC_hg19_v1_chr18_-_59854208	550969	-	TSC_hg19_v1_chr18_-_59854227 BC028363	550996	-	AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##BC028363|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.913527	CTCF.p2:4:0.914
chr3	136751396	136751518	reg1009264.p1	11.592	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-74627	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-102120	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	-170365	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	731690	+	AK098474 NM_001002026 AF349452	966222	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	977546	+	AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18	0.145986	
chr10	45360371	45360530	reg1008960.p1	11.591	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	-479951	-	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-1216144	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-1216245	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	46268	+	AK056518 TSC_hg19_v1_chr10_-_45455156	94697	-	TSC_hg19_v1_chr10_+_45455249 AY216713 AY216714 AY216715 AY216716 NM_032023 BC032593 AF260335 AK311531	94782	+	CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)##AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	0.997857	CTCF.p2:7:0.998
chr20	50745162	50745297	reg1009324.p1	11.591	+	AY170621 AY170622 AY172738 BC111714 AK001666 NM_020436	-326233	-	TSC_hg19_v1_chr20_-_50384925 NM_006045	-360301	-	TSC_hg19_v1_chr20_-_50384875 AB385363 AB014511 AK299064	-360351	-	BT009760 AB527686 BC021087 AK001744 TSC_hg19_v1_chr20_-_50808313 AK090547 BC031524 AK001596 AK222712	63026	-	BC012759 BC041622 NM_018197 NM_022088 NM_199426 NM_199427	63294	-	BX640770 NM_173485	843716	+	AY170621|SALL4|57167|sal-like 4 (Drosophila)##AY170622|SALL4|57167|sal-like 4 (Drosophila)##AY172738|SALL4|57167|sal-like 4 (Drosophila)##BC111714|SALL4|57167|sal-like 4 (Drosophila)##AK001666|SALL4|57167|sal-like 4 (Drosophila)##NM_020436|SALL4|57167|sal-like 4 (Drosophila)##NM_006045|ATP9A|10079|ATPase, class II, type 9A##AB014511|ATP9A|10079|ATPase, class II, type 9A##AK299064|ATP9A|10079|ATPase, class II, type 9A##BT009760|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC021087|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001744|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK090547|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC031524|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001596|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK222712|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC012759|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC041622|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_018197|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_022088|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199426|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199427|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2	0.975891	CTCF.p2:-11:0.976
chr22	42159177	42159319	reg1010388.p1	11.591	+	BC025400 NM_152513 BC035720 BC144638	-63736	+	BC035403 NM_001142964 AK131457	-72690	+	AK124020 TSC_hg19_v1_chr22_-_42084824 BC005358 AF155235 NM_001003796	-74383	-	TSC_hg19_v1_chr22_+_42196682 NM_024821 AK026002 AK299311 BC017693 CR456484	37424	+	NM_004599 TSC_hg19_v1_chr22_+_42229105	69857	+	TSC_hg19_v1_chr22_+_42229114 BC051799	69864	+	BC025400|MEI1|150365|meiosis inhibitor 1##NM_152513|MEI1|150365|meiosis inhibitor 1##BC035720|MEI1|150365|meiosis inhibitor 1##BC144638|MEI1|150365|meiosis inhibitor 1##BC035403|C22orf46|79640|chromosome 22 open reading frame 46##NM_001142964|C22orf46|79640|chromosome 22 open reading frame 46##AK131457|C22orf46|79640|chromosome 22 open reading frame 46##BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_024821|CCDC134|79879|coiled-coil domain containing 134##AK026002|CCDC134|79879|coiled-coil domain containing 134##AK299311|CCDC134|79879|coiled-coil domain containing 134##BC017693|CCDC134|79879|coiled-coil domain containing 134##CR456484|CCDC134|79879|coiled-coil domain containing 134##NM_004599|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051799|SREBF2|6721|sterol regulatory element binding transcription factor 2	0.908269	CTCF.p2:7:0.908
chr4	88954602	88954716	reg1007886.p1	11.591	+	TSC_hg19_v1_chr4_+_88928803 BC112261 BC112263 NM_000297 U50928	-25851	+	AY956318 X13694 TSC_hg19_v1_chr4_+_88896900	-57746	+	TSC_hg19_v1_chr4_+_88896868 AK290104 M83248 AK315461 AF052124	-57780	+	BC021281 NM_004827 AF151530	125378	-	TSC_hg19_v1_chr4_-_89205714 AL834271 AK314417 AK054678 AY157615 AY994097 AF351614 BC020850 BC037552	251068	-	AY435431 NM_152542 TSC_hg19_v1_chr4_-_89205908 AL834167	251244	-	BC112261|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##BC112263|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##NM_000297|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##U50928|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##AY956318|SPP1|6696|secreted phosphoprotein 1##X13694|SPP1|6696|secreted phosphoprotein 1##AK290104|SPP1|6696|secreted phosphoprotein 1##M83248|SPP1|6696|secreted phosphoprotein 1##AK315461|SPP1|6696|secreted phosphoprotein 1##AF052124|SPP1|6696|secreted phosphoprotein 1##BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2##NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2##AL834271|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AK314417|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AK054678|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY157615|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY994097|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AF351614|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC020850|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC037552|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY435431|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##NM_152542|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AL834167|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K	0.995968	CTCF.p2:-7:0.996
chr11	3362675	3362789	reg1007382.p1	11.590	+	AK293940 NM_001039165	-109117	-	AB529240 AY255583 NM_001164377	-122690	-	TSC_hg19_v1_chr11_-_3186559 NM_001144063 NM_020896 NM_145638	-176163	-	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	37647	-	NM_053017 NM_001079536 Y16835	300782	-	BC017828 BC069102 NM_004314 S74683 BC111729	303638	+	AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##NM_001144063|OSBPL5|114879|oxysterol binding protein-like 5##NM_020896|OSBPL5|114879|oxysterol binding protein-like 5##NM_145638|OSBPL5|114879|oxysterol binding protein-like 5##BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195##NM_053017|ART5|116969|ADP-ribosyltransferase 5##NM_001079536|ART5|116969|ADP-ribosyltransferase 5##Y16835|ART5|116969|ADP-ribosyltransferase 5##BC017828|ART1|417|ADP-ribosyltransferase 1##BC069102|ART1|417|ADP-ribosyltransferase 1##NM_004314|ART1|417|ADP-ribosyltransferase 1##S74683|ART1|417|ADP-ribosyltransferase 1##BC111729|ART1|417|ADP-ribosyltransferase 1	0.979768	CTCF.p2:-4:0.980
chr17	67565300	67565433	reg1007668.p1	11.590	+	TSC_hg19_v1_chr17_+_67498396 U39064	-66886	+	AK290747 NM_002758 U39065 AK225719 X96757 BC012009	-154490	+	TSC_hg19_v1_chr17_-_67323275 BC029426 AJ512612 AJ275973 AK292592 NM_172232	-242077	-	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	506064	+	BC033038 NM_170742	535628	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	600330	+	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6##NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6##U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6##X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC029426|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ512612|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ275973|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AK292592|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_172232|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2	0.999636	CTCF.p2:-14:1.000
chr1	90064707	90064849	reg1010081.p1	11.590	+	AF385436 NM_015350	-40507	+	TSC_hg19_v1_chr1_+_89990454 BC060782 BC030607	-74302	+	NM_001134476 TSC_hg19_v1_chr1_+_89990414	-74363	+	TSC_hg19_v1_chr1_+_90098630 BC036122	33855	+	NM_032270 TSC_hg19_v1_chr1_+_90098643	33867	+	TSC_hg19_v1_chr1_+_90098707 AK127881 AB081509 BC103929 BC113973	33986	+	AF385436|LRRC8B|23507|leucine rich repeat containing 8 family, member B##NM_015350|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC060782|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC030607|LRRC8B|23507|leucine rich repeat containing 8 family, member B##NM_001134476|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C##AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C##AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C	0.383564	CTCF.p2:7:0.384
chr2	86306019	86306142	reg1007262.p2	11.590	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-189994	-	AY152815 NM_001042437	-211288	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-325075	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	26903	-	NM_015425	27197	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	27261	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.191427	
chr4	4882383	4882486	reg1006568.p2	11.589	+	TSC_hg19_v1_chr4_+_4861391 NM_002448 AK290636 M97676 BC021285	-21036	+	TSC_hg19_v1_chr4_+_4543925 BC025734	-338550	+	TSC_hg19_v1_chr4_-_4543750 NM_016930	-338673	-	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	138712	-	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	170846	+	TSC_hg19_v1_chr4_+_5053464 AJ250839 NM_018401 BC038238 AB528925 DQ890554 DQ893714	171093	+	NM_002448|MSX1|4487|msh homeobox 1##AK290636|MSX1|4487|msh homeobox 1##M97676|MSX1|4487|msh homeobox 1##BC021285|MSX1|4487|msh homeobox 1##BC025734|LOC100507266|100507266|uncharacterized LOC100507266##NM_016930|STX18|53407|syntaxin 18##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B##AJ250839|STK32B|55351|serine/threonine kinase 32B##NM_018401|STK32B|55351|serine/threonine kinase 32B##BC038238|STK32B|55351|serine/threonine kinase 32B##DQ890554|STK32B|55351|serine/threonine kinase 32B##DQ893714|STK32B|55351|serine/threonine kinase 32B	0.040122	
chr22	24899207	24899344	reg1007613.p1	11.588	+	AK314727 CR627429 CR456375 NM_016327 BC131703 TSC_hg19_v1_chr22_+_24891299 AF163312 AB013885 BC033388 AB528843 BC139840 BC139843 CU013080 CU013368	-8034	+	NM_000675 AK123058 EU036693 AK301420 BC013780	-75710	+	TSC_hg19_v1_chr22_+_24819870 EU036694	-79395	+	CU687038 TSC_hg19_v1_chr22_-_24951093 BC053529 AK296893	51770	-	TSC_hg19_v1_chr22_-_24951145 AK054681 AK294972	51868	-	TSC_hg19_v1_chr22_-_24951160 BC070109 NM_031444	51939	-	AK314727|UPB1|51733|ureidopropionase, beta##CR627429|UPB1|51733|ureidopropionase, beta##CR456375|UPB1|51733|ureidopropionase, beta##NM_016327|UPB1|51733|ureidopropionase, beta##BC131703|UPB1|51733|ureidopropionase, beta##AF163312|UPB1|51733|ureidopropionase, beta##AB013885|UPB1|51733|ureidopropionase, beta##BC033388|UPB1|51733|ureidopropionase, beta##BC139840|UPB1|51733|ureidopropionase, beta##BC139843|UPB1|51733|ureidopropionase, beta##CU013080|UPB1|51733|ureidopropionase, beta##CU013368|UPB1|51733|ureidopropionase, beta##NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor##EU036694|ADORA2A|135|adenosine A2a receptor##BC053529|C22orf13|83606|chromosome 22 open reading frame 13##AK296893|C22orf13|83606|chromosome 22 open reading frame 13##AK054681|C22orf13|83606|chromosome 22 open reading frame 13##AK294972|C22orf13|83606|chromosome 22 open reading frame 13##BC070109|C22orf13|83606|chromosome 22 open reading frame 13##NM_031444|C22orf13|83606|chromosome 22 open reading frame 13	0.921898	CTCF.p2:6:0.922
chrX	53463082	53463205	reg1006856.p1	11.588	+	CR456723 TSC_hg19_v1_chrX_-_53461318 AF069134 BC008708 BC000372 BC000829 U73514 AF035555 U96132 NM_001037811 NM_004493	-1837	-	AK304179 AK057345 NM_144968 AK292871 TSC_hg19_v1_chrX_+_53449863 AK290346 BC036767 NM_001031745	-13297	+	TSC_hg19_v1_chrX_-_53449614 BC080185 BC112127 BC171726 NM_006306 AK291921	-13499	-	TSC_hg19_v1_chrX_-_53629608 AB071605	166471	-	TSC_hg19_v1_chrX_-_53713665 BC018750 BC038184 DQ097177 NM_031407 AK056671	250534	-	BC042108 NM_001184898	606466	-	CR456723|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AF069134|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC008708|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC000372|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC000829|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##U73514|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AF035555|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##U96132|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##NM_001037811|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##NM_004493|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AK304179|RIBC1|158787|RIB43A domain with coiled-coils 1##AK057345|RIBC1|158787|RIB43A domain with coiled-coils 1##NM_144968|RIBC1|158787|RIB43A domain with coiled-coils 1##AK292871|RIBC1|158787|RIB43A domain with coiled-coils 1##AK290346|RIBC1|158787|RIB43A domain with coiled-coils 1##BC036767|RIBC1|158787|RIB43A domain with coiled-coils 1##NM_001031745|RIBC1|158787|RIB43A domain with coiled-coils 1##BC080185|SMC1A|8243|structural maintenance of chromosomes 1A##BC112127|SMC1A|8243|structural maintenance of chromosomes 1A##BC171726|SMC1A|8243|structural maintenance of chromosomes 1A##NM_006306|SMC1A|8243|structural maintenance of chromosomes 1A##AK291921|SMC1A|8243|structural maintenance of chromosomes 1A##AB071605|HUWE1|10075|HECT, UBA and WWE domain containing 1##BC018750|HUWE1|10075|HECT, UBA and WWE domain containing 1##BC038184|HUWE1|10075|HECT, UBA and WWE domain containing 1##DQ097177|HUWE1|10075|HECT, UBA and WWE domain containing 1##NM_031407|HUWE1|10075|HECT, UBA and WWE domain containing 1##AK056671|HUWE1|10075|HECT, UBA and WWE domain containing 1##BC042108|PHF8|23133|PHD finger protein 8##NM_001184898|PHF8|23133|PHD finger protein 8	0.588313	CTCF.p2:-10:0.588
chr13	25245639	25245775	reg1008106.p2	11.587	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	-158796	-	BC040438 NM_178540 AY358145	-361990	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	-400809	+	AK292968 NM_001185085 NM_001676	8841	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	92612	+	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	251262	-	BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13##AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J	0.826854	CTCF.p2:2:0.827
chr17	73746075	73746199	reg1010457.p1	11.587	+	BC109238 TSC_hg19_v1_chr17_+_73723807	-22366	+	NM_001005619 X52186 AF011375	-25358	+	BC118916 TSC_hg19_v1_chr17_+_73717603 AB208913	-28536	+	BT007005 CU674592 TSC_hg19_v1_chr17_-_73761274 U26401 AK316181 AK314890 AK303748 BC001166 AK130064 AK310203 NM_000154 AK303832	15144	-	L05088 TSC_hg19_v1_chr17_-_73774461	28318	-	BC108701 AF218029 BC001124 BC006497 BC012813 BC017558 TSC_hg19_v1_chr17_-_73775861 BX647280 AK130772 AK304607 AK312762 BX537379 NM_005324	29704	-	BC109238|ITGB4|3691|integrin, beta 4##NM_001005619|ITGB4|3691|integrin, beta 4##X52186|ITGB4|3691|integrin, beta 4##AF011375|ITGB4|3691|integrin, beta 4##BC118916|ITGB4|3691|integrin, beta 4##AB208913|ITGB4|3691|integrin, beta 4##BT007005|GALK1|2584|galactokinase 1##U26401|GALK1|2584|galactokinase 1##AK316181|GALK1|2584|galactokinase 1##AK314890|GALK1|2584|galactokinase 1##AK303748|GALK1|2584|galactokinase 1##BC001166|GALK1|2584|galactokinase 1##AK130064|GALK1|2584|galactokinase 1##AK310203|GALK1|2584|galactokinase 1##NM_000154|GALK1|2584|galactokinase 1##AK303832|GALK1|2584|galactokinase 1##BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)##AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)##NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)	0.999859	CTCF.p2:2:1.000
chr22	37941271	37941385	reg1009016.p1	11.587	+	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	-26021	-	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	-58983	-	TSC_hg19_v1_chr22_-_37823515 NM_052906	-117800	-	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	15145	+	M87842 BC059782 NM_006498 CR456512	34672	-	TSC_hg19_v1_chr22_+_38004480 NM_001001560 NM_001001561 NM_001172687 NM_013365 AK075256	63234	+	AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10##CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2##NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M87842|LGALS2|3957|lectin, galactoside-binding, soluble, 2##BC059782|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_006498|LGALS2|3957|lectin, galactoside-binding, soluble, 2##CR456512|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_001001560|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001001561|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001172687|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_013365|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK075256|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1	0.028742	
chr1	214296621	214296746	reg1009154.p1	11.586	+	BC024201 NM_002763	-134824	+	AK298182 TSC_hg19_v1_chr1_+_214161296 U44060	-135394	+	TSC_hg19_v1_chr1_+_213224716 AB070706 EF491805	-1071923	+	TSC_hg19_v1_chr1_+_214454550 BC068511 BC049367 BC094747 BC057793 NM_020197 AF226053 BC098133 BC098276 BC098305 BC098335 BC028104 AK313868 AB590916 BC039890	157754	+	X82676 TSC_hg19_v1_chr1_-_214724620 BC017300 AK090596	427924	-	TSC_hg19_v1_chr1_-_214724946 AK298120 BX538306 AK291641	428216	-	BC024201|PROX1|5629|prospero homeobox 1##NM_002763|PROX1|5629|prospero homeobox 1##AK298182|PROX1|5629|prospero homeobox 1##U44060|PROX1|5629|prospero homeobox 1##AB070706|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC068511|SMYD2|56950|SET and MYND domain containing 2##BC049367|SMYD2|56950|SET and MYND domain containing 2##BC094747|SMYD2|56950|SET and MYND domain containing 2##BC057793|SMYD2|56950|SET and MYND domain containing 2##NM_020197|SMYD2|56950|SET and MYND domain containing 2##AF226053|SMYD2|56950|SET and MYND domain containing 2##BC098133|SMYD2|56950|SET and MYND domain containing 2##BC098276|SMYD2|56950|SET and MYND domain containing 2##BC098305|SMYD2|56950|SET and MYND domain containing 2##BC098335|SMYD2|56950|SET and MYND domain containing 2##BC028104|SMYD2|56950|SET and MYND domain containing 2##AK313868|SMYD2|56950|SET and MYND domain containing 2##BC039890|SMYD2|56950|SET and MYND domain containing 2##X82676|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##BC017300|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK090596|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK298120|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK291641|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14	0.993411	CTCF.p2:18:0.993
chr7	143534465	143534584	reg1007021.p2	11.586	+	BC110410 BC043153 NM_178561	-79718	-	NM_001130026 AK296318	-121574	+	BC113530 BC117233 NM_173678 AY167570 BC010225	-215982	+	AK299911 TSC_hg19_v1_chr7_-_143582416 NM_001206941	47890	-	TSC_hg19_v1_chr7_-_143599249 AB018281 NM_014719 BC000609 AK291605 AK001640 NM_001206938	64741	-	BC136812 BC136813 NM_001004685	97767	+	BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_178561|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_001130026|FAM115C|285966|family with sequence similarity 115, member C##AK296318|FAM115C|285966|family with sequence similarity 115, member C##BC113530|FAM115C|285966|family with sequence similarity 115, member C##BC117233|FAM115C|285966|family with sequence similarity 115, member C##NM_173678|FAM115C|285966|family with sequence similarity 115, member C##AY167570|FAM115C|285966|family with sequence similarity 115, member C##BC010225|LOC154761|154761|uncharacterized LOC154761##AK299911|FAM115A|9747|family with sequence similarity 115, member A##NM_001206941|FAM115A|9747|family with sequence similarity 115, member A##AB018281|FAM115A|9747|family with sequence similarity 115, member A##NM_014719|FAM115A|9747|family with sequence similarity 115, member A##BC000609|FAM115A|9747|family with sequence similarity 115, member A##AK291605|FAM115A|9747|family with sequence similarity 115, member A##AK001640|FAM115A|9747|family with sequence similarity 115, member A##NM_001206938|FAM115A|9747|family with sequence similarity 115, member A##BC136812|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##BC136813|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##NM_001004685|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2	0.999676	CTCF.p2:-6:1.000
chr1	43212923	43213052	reg1009133.p1	11.585	+	AF497644 BC030524 AK298992 AK096063 AK291197 NM_001123395 NM_001185117 NM_148960	-7159	-	BC020164 TSC_hg19_v1_chr1_+_43162416	-50586	+	TSC_hg19_v1_chr1_+_43148644 BC013838	-64403	+	AK027680 AK297980 TSC_hg19_v1_chr1_-_43232700 BC091513 BC143961 BC143962 AK075418 BC004160 AK027648 AF097431 AF097432 BC108311 AK027697 AK300210 BC068461	19701	-	TSC_hg19_v1_chr1_-_43232730 NM_001146289 NM_001243246 NM_022356	19755	-	TSC_hg19_v1_chr1_+_43232919 NM_024097	19928	+	AF497644|CLDN19|149461|claudin 19##BC030524|CLDN19|149461|claudin 19##AK298992|CLDN19|149461|claudin 19##AK096063|CLDN19|149461|claudin 19##AK291197|CLDN19|149461|claudin 19##NM_001123395|CLDN19|149461|claudin 19##NM_001185117|CLDN19|149461|claudin 19##NM_148960|CLDN19|149461|claudin 19##BC020164|YBX1|4904|Y box binding protein 1##BC013838|YBX1|4904|Y box binding protein 1##AK027680|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK297980|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC091513|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC143961|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC143962|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK075418|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC004160|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK027648|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AF097431|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AF097432|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC108311|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK027697|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK300210|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC068461|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_001146289|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_001243246|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_022356|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_024097|C1orf50|79078|chromosome 1 open reading frame 50	0.99553	CTCF.p2:14:0.996
chr2	101226902	101227012	reg1007973.p2	11.585	+	TSC_hg19_v1_chr2_+_101179454 NM_024065 BC001021 AK300827 AF110511 AF267853	-47521	+	AB164464 NM_001011717	-140014	+	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	-192860	-	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	209809	+	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	391765	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	540826	-	NM_024065|PDCL3|79031|phosducin-like 3##BC001021|PDCL3|79031|phosducin-like 3##AK300827|PDCL3|79031|phosducin-like 3##AF110511|PDCL3|79031|phosducin-like 3##AF267853|PDCL3|79031|phosducin-like 3##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S##BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)	0.0	
chr3	30083864	30083994	reg1010097.p1	11.584	+	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	-760965	+	NM_001040432	-1651943	+	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	-1693368	-	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	564093	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	564474	+	AL832766 NM_207359	852223	-	NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1	0.99931	CTCF.p2:2:0.999
chr5	75471009	75471132	reg1007999.p1	11.584	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-91799	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-457810	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	-462808	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	228046	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	448075	-	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	540886	+	AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor	0.978645	CTCF.p2:6:0.979
chr4	113243069	113243208	reg1009664.p1	11.583	+	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	-24611	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	-36137	-	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	-90054	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	194194	-	TSC_hg19_v1_chr4_-_113558057 BC044799 BC028584 AK002193	314908	-	NM_016648	314981	+	NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2##BC044799|C4orf21|55345|chromosome 4 open reading frame 21##BC028584|C4orf21|55345|chromosome 4 open reading frame 21##AK002193|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7	0.998846	CTCF.p2:-4:0.999
chr9	123975612	123975741	reg1008718.p1	11.583	+	TSC_hg19_v1_chr9_-_123964341 NM_016322	-11326	-	TSC_hg19_v1_chr9_-_123964201 AK090889	-11491	-	TSC_hg19_v1_chr9_-_123964148 AK023524	-11530	-	TSC_hg19_v1_chr9_+_124030407 NM_001127662 NM_001127663 NM_001127664 NM_001127665 NM_001127666 NM_001127667 NM_198252 AK096280	54713	+	TSC_hg19_v1_chr9_+_124030439 AK304629 AK295572 AK300631	54753	+	AK295201 TSC_hg19_v1_chr9_+_124030468	54786	+	NM_016322|RAB14|51552|RAB14, member RAS oncogene family##AK090889|RAB14|51552|RAB14, member RAS oncogene family##AK023524|RAB14|51552|RAB14, member RAS oncogene family##NM_001127662|GSN|2934|gelsolin##NM_001127663|GSN|2934|gelsolin##NM_001127664|GSN|2934|gelsolin##NM_001127665|GSN|2934|gelsolin##NM_001127666|GSN|2934|gelsolin##NM_001127667|GSN|2934|gelsolin##NM_198252|GSN|2934|gelsolin##AK096280|GSN|2934|gelsolin##AK304629|GSN|2934|gelsolin##AK295572|GSN|2934|gelsolin##AK300631|GSN|2934|gelsolin##AK295201|GSN|2934|gelsolin	0.990514	CTCF.p2:-4:0.991
chr11	66849054	66849164	reg1007075.p1	11.582	+	TSC_hg19_v1_chr11_+_66824317 BC001338 AF498973 CU674656 DQ891124 DQ894303	-24769	+	TSC_hg19_v1_chr11_+_66824285 NM_014578	-24823	+	NM_177963 AK289672 AK289727 BC037406	-58257	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	37630	+	AK096194 TSC_hg19_v1_chr11_+_67007484	158375	+	TSC_hg19_v1_chr11_+_67007558 AB490246 AK299725	158474	+	BC001338|RHOD|29984|ras homolog gene family, member D##AF498973|RHOD|29984|ras homolog gene family, member D##DQ891124|RHOD|29984|ras homolog gene family, member D##DQ894303|RHOD|29984|ras homolog gene family, member D##NM_014578|RHOD|29984|ras homolog gene family, member D##NM_177963|SYT12|91683|synaptotagmin XII##AK289672|SYT12|91683|synaptotagmin XII##AK289727|SYT12|91683|synaptotagmin XII##BC037406|SYT12|91683|synaptotagmin XII##BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A##AK096194|LOC100131150|100131150|uncharacterized LOC100131150##AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A##AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A	0.99991	CTCF.p2:-5:1.000
chr5	140014712	140014814	reg1007594.p1	11.582	+	NM_001040021 NM_001174104 NM_001174105	-1478	-	NM_000591	-1729	-	M86511 TSC_hg19_v1_chr5_-_140012761 BC010507 AK313277 X13334	-1994	-	TSC_hg19_v1_chr5_+_140019047 NM_018502 AK301502 AK308722 AK097088 AK289495 BC001910	4285	+	CR457016 TSC_hg19_v1_chr5_-_140027216 BC003674	12434	-	TSC_hg19_v1_chr5_-_140027241 AF077029 AK311095 NM_001185012 NM_002488	12537	-	NM_001040021|CD14|929|CD14 molecule##NM_001174104|CD14|929|CD14 molecule##NM_001174105|CD14|929|CD14 molecule##NM_000591|CD14|929|CD14 molecule##M86511|CD14|929|CD14 molecule##BC010507|CD14|929|CD14 molecule##AK313277|CD14|929|CD14 molecule##X13334|CD14|929|CD14 molecule##NM_018502|TMCO6|55374|transmembrane and coiled-coil domains 6##AK301502|TMCO6|55374|transmembrane and coiled-coil domains 6##AK308722|TMCO6|55374|transmembrane and coiled-coil domains 6##AK097088|TMCO6|55374|transmembrane and coiled-coil domains 6##AK289495|TMCO6|55374|transmembrane and coiled-coil domains 6##BC001910|TMCO6|55374|transmembrane and coiled-coil domains 6##CR457016|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##BC003674|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##AF077029|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##NM_001185012|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##NM_002488|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa	0.838519	CTCF.p2:0:0.839
chr1	19299101	19299225	reg1008443.p1	11.581	+	TSC_hg19_v1_chr1_-_19282773 NM_001136265	-16364	-	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-70009	-	AK294552 NM_001161504	-81779	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	237583	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	278829	-	AK075563 AK291618 TSC_hg19_v1_chr1_-_19578019	278854	-	NM_001136265|IFFO2|126917|intermediate filament family orphan 2##DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090##AK075563|KIAA0090|23065|KIAA0090##AK291618|KIAA0090|23065|KIAA0090	0.776998	CTCF.p2:11:0.370	CTCF.p2:14:0.375
chr16	33647117	33647240	reg1009148.p1	11.581	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-385045	+	AL133588 NM_016212	-385664	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-441580	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	13008094	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	13008128	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	13075884	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.99964	CTCF.p2:2:1.000
chr17	47857172	47857311	reg1009297.p1	11.581	+	NM_030802 BC037572 TSC_hg19_v1_chr17_-_47841551	-15695	-	AF123073 BC065199 TSC_hg19_v1_chr17_-_47841483	-15762	-	BX641166 TSC_hg19_v1_chr17_-_47785555	-71691	-	NM_001199155 NM_001199156 NM_001199157 NM_001199158 NM_007067 TSC_hg19_v1_chr17_+_47866042 AK293976 AK294014 AK023890 AK294052 AK294836 AF140360	8777	+	TSC_hg19_v1_chr17_+_47866068 BC015485 BC032640 AF217502	8840	+	TSC_hg19_v1_chr17_+_47866119 AF074606 AB463912 CU689460 DQ890883 DQ894037	8917	+	NM_030802|FAM117A|81558|family with sequence similarity 117, member A##BC037572|FAM117A|81558|family with sequence similarity 117, member A##AF123073|FAM117A|81558|family with sequence similarity 117, member A##BC065199|FAM117A|81558|family with sequence similarity 117, member A##BX641166|SLC35B1|10237|solute carrier family 35, member B1##NM_001199155|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199156|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199157|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199158|KAT7|11143|K(lysine) acetyltransferase 7##NM_007067|KAT7|11143|K(lysine) acetyltransferase 7##AK293976|KAT7|11143|K(lysine) acetyltransferase 7##AK294014|KAT7|11143|K(lysine) acetyltransferase 7##AK023890|KAT7|11143|K(lysine) acetyltransferase 7##AK294052|KAT7|11143|K(lysine) acetyltransferase 7##AK294836|KAT7|11143|K(lysine) acetyltransferase 7##AF140360|KAT7|11143|K(lysine) acetyltransferase 7##BC015485|KAT7|11143|K(lysine) acetyltransferase 7##BC032640|KAT7|11143|K(lysine) acetyltransferase 7##AF217502|KAT7|11143|K(lysine) acetyltransferase 7##AF074606|KAT7|11143|K(lysine) acetyltransferase 7##DQ890883|KAT7|11143|K(lysine) acetyltransferase 7##DQ894037|KAT7|11143|K(lysine) acetyltransferase 7	0.993712	CTCF.p2:4:0.994
chr4	67953756	67953877	reg1009196.p1	11.581	+	TSC_hg19_v1_chr4_-_66536182 AB209375	-1417619	-	AK307826 NM_004439 NM_182472	-1418164	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	-2678720	-	CU688992 TSC_hg19_v1_chr4_-_68411171	457307	-	TSC_hg19_v1_chr4_-_68411224 BC030695 BX648166 BC041117 AK307928 AK308170 M95724	457392	-	TSC_hg19_v1_chr4_-_68411282 NM_001812	457462	-	AB209375|EPHA5|2044|EPH receptor A5##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC030695|CENPC1|1060|centromere protein C 1##BX648166|CENPC1|1060|centromere protein C 1##BC041117|CENPC1|1060|centromere protein C 1##AK307928|CENPC1|1060|centromere protein C 1##AK308170|CENPC1|1060|centromere protein C 1##M95724|CENPC1|1060|centromere protein C 1##NM_001812|CENPC1|1060|centromere protein C 1	0.996864	CTCF.p2:7:0.997
chr16	71533791	71533912	reg1008730.p1	11.580	+	AK292260 BC030658 AK057330 BC047091 NM_006961	-10636	-	AK123826 TSC_hg19_v1_chr16_+_71496196	-37663	+	TSC_hg19_v1_chr16_-_71496127 AF507946 BC007256 NM_145911 BC048974 AK091039 AX746746 AK297130	-37730	-	NM_005769 AF131235 NM_001166395 AK026635 AK074746	26242	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	77121	-	BC005052 NM_001017967 NM_052858 AK307585 BC011893 BC013376 AK056842 AK292185 CU680584	126246	+	AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19##AF507946|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC007256|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_145911|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC048974|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK091039|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK297130|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase##BC005052|MARVELD3|91862|MARVEL domain containing 3##NM_001017967|MARVELD3|91862|MARVEL domain containing 3##NM_052858|MARVELD3|91862|MARVEL domain containing 3##AK307585|MARVELD3|91862|MARVEL domain containing 3##BC011893|MARVELD3|91862|MARVEL domain containing 3##BC013376|MARVELD3|91862|MARVEL domain containing 3##AK056842|MARVELD3|91862|MARVEL domain containing 3##AK292185|MARVELD3|91862|MARVEL domain containing 3	0.801871	CTCF.p2:11:0.802
chr2	237969516	237969630	reg1006626.p1	11.580	+	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	-491145	+	BC043504 NM_024726 AK294105 BC028699	-553441	-	NM_212556 BX647589	-796579	-	BC036499 NM_006710 NM_198189	24445	+	TSC_hg19_v1_chr2_-_237994424 AK056246	24864	-	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	24947	+	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	0.925272	CTCF.p2:25:0.925
chr5	35651409	35651525	reg1008541.p1	11.580	+	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	-33458	+	NM_000949	-420645	-	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	-420890	-	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	205566	+	NM_001042625 BC017586 NM_144647	287341	-	CU686633 BC068446 AK308046 AK290809 AK057066 AK303770 AK315851 AK296136 NM_152404	339971	-	BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##NM_000949|PRLR|5618|prolactin receptor##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like##BC068446|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK308046|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK290809|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK057066|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK303770|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK315851|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK296136|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_152404|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	0.899504	CTCF.p2:-5:0.900
chrX	71346547	71346668	reg1009003.p1	11.580	+	TSC_hg19_v1_chrX_+_71130694 NM_001013627	-215829	+	NM_001145139 NM_001145140	-363468	+	NM_001145139 NM_001145140	-408473	-	AB082532 BC151224 NM_001024455 TSC_hg19_v1_chrX_-_71351772	5184	-	AK126598 AY572224 NM_207422	17426	+	NM_001170747 NM_006223 BC093700 BC112281 HQ258728 TSC_hg19_v1_chrX_+_71401606 AB009690 BC005234 BC070288 BC111394 BC104653 AK127605 AF143096	54968	+	NM_001013627|NHSL2|340527|NHS-like 2##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##AB082532|RGAG4|340526|retrotransposon gag domain containing 4##BC151224|RGAG4|340526|retrotransposon gag domain containing 4##NM_001024455|RGAG4|340526|retrotransposon gag domain containing 4##AK126598|FLJ44635|392490|TPT1-like protein##AY572224|FLJ44635|392490|TPT1-like protein##NM_207422|FLJ44635|392490|TPT1-like protein##NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##HQ258728|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	0.9648	CTCF.p2:0:0.965
chr2	114361741	114361878	reg1008994.p1	11.579	+	BC027921 TSC_hg19_v1_chr2_+_114341690	-20110	+	AK292759 AK309926 TSC_hg19_v1_chr2_+_114341689	-20120	+	AL137714 AK302089 AK308574 TSC_hg19_v1_chr2_+_114341674	-20192	+	TSC_hg19_v1_chr2_-_114384648 BC000596 BC105600	22839	-	TSC_hg19_v1_chr2_+_114384811 BC111008 NM_007082 NM_013412	23005	+	TSC_hg19_v1_chr2_+_114384849 AK289496 AF095350 AF095351 BC126129 BC144050 BC144052	23097	+	BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK292759|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##BC000596|RPL23AP7|118433|ribosomal protein L23a pseudogene 7##BC105600|RPL23AP7|118433|ribosomal protein L23a pseudogene 7##BC111008|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##NM_007082|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##NM_013412|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AK289496|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095350|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095351|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC126129|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144050|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144052|RABL2A|11159|RAB, member of RAS oncogene family-like 2A	2.103638	CTCF.p2:-27:0.999	CTCF.p2:-85:0.999
chr4	129495900	129496044	reg1008639.p1	11.579	+	AK131272 NM_006320	-285989	-	TSC_hg19_v1_chr4_-_129208969 BC092478	-286981	-	AK091741 AX747155 TSC_hg19_v1_chr4_-_129208964 BC016692	-287008	-	TSC_hg19_v1_chr4_+_129730875 NM_024900 NM_199320 AK027620 AF520952 AK304815 AK127326	234898	+	TSC_hg19_v1_chr4_+_129732427 BC032376	236481	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	518618	-	AK131272|PGRMC2|10424|progesterone receptor membrane component 2##NM_006320|PGRMC2|10424|progesterone receptor membrane component 2##BC092478|PGRMC2|10424|progesterone receptor membrane component 2##AK091741|PGRMC2|10424|progesterone receptor membrane component 2##BC016692|PGRMC2|10424|progesterone receptor membrane component 2##NM_024900|PHF17|79960|PHD finger protein 17##NM_199320|PHF17|79960|PHD finger protein 17##AK027620|PHF17|79960|PHD finger protein 17##AF520952|PHF17|79960|PHD finger protein 17##AK304815|PHF17|79960|PHD finger protein 17##AK127326|PHF17|79960|PHD finger protein 17##BC032376|PHF17|79960|PHD finger protein 17##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1	0.999703	CTCF.p2:1:1.000
chr6	36648337	36648444	reg1006272.p1	11.579	+	TSC_hg19_v1_chr6_+_36646490 BC013967 AB209881 BC001935 BC000312 L25610 L26165 U03106 S67388 BC000275 L47232 L47233 AY008263	-1865	+	NM_000389 TSC_hg19_v1_chr6_+_36646486 AK309512 NM_001220778 U09579	-1919	+	NM_001220777 NM_078467	-4139	+	AK125083 TSC_hg19_v1_chr6_+_36665627	17238	+	TSC_hg19_v1_chr6_-_36807217 NM_020939	158828	-	TSC_hg19_v1_chr6_-_36807775 AB046819	159402	-	BC013967|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AB209881|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC001935|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000312|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L25610|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L26165|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U03106|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##S67388|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000275|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47232|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47233|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_000389|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK309512|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_001220778|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U09579|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_001220777|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_078467|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK125083|RAB44|401258|RAB44, member RAS oncogene family##NM_020939|CPNE5|57699|copine V##AB046819|CPNE5|57699|copine V	0.850139	CTCF.p2:6:0.850
chr4	82272938	82273054	reg1007636.p2	11.578	+	AB528214 D70899 NM_006259 X94612	-146789	-	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	-320854	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-1016099	+	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	119987	-	TSC_hg19_v1_chr4_-_82393062 AK291459 BC036784 AK303625 AK056257 NM_152545	120064	-	D55671 TSC_hg19_v1_chr4_-_83294725	1021679	-	D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B##AK291459|RASGEF1B|153020|RasGEF domain family, member 1B##BC036784|RASGEF1B|153020|RasGEF domain family, member 1B##AK303625|RASGEF1B|153020|RasGEF domain family, member 1B##AK056257|RASGEF1B|153020|RasGEF domain family, member 1B##NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B##D55671|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	1.011456	CTCF.p2:4:1.000
chr5	172631392	172631495	reg1006253.p1	11.577	+	NM_001205 NM_013978 NM_013979 NM_013980 BC010959 TSC_hg19_v1_chr5_+_172571536 AF083957 AF083958 U15172 AB527856 CU679862 AF083956 AY216799	-59947	+	TSC_hg19_v1_chr5_+_172484383 AK297424	-147060	+	TSC_hg19_v1_chr5_+_172483354 BX647768 NM_001168393 NM_001168394 NM_153607 AK300043 AY139008 BC041709 AY174896 AK124117 BX647573 AK291677	-148059	+	AB021133 CU693024 AB464641 DQ893313 DQ894104 DQ896627 BC025711 AK290615 AK307249 AK297844 AK307218 AK309495 U34962 AK307247 NM_001166175 NM_001166176 NM_004387	30756	-	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	123819	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	124000	-	NM_001205|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013978|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013979|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013980|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##BC010959|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083957|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083958|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##U15172|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083956|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AY216799|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AK297424|C5orf41|153222|chromosome 5 open reading frame 41##BX647768|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41##NM_153607|C5orf41|153222|chromosome 5 open reading frame 41##AK300043|C5orf41|153222|chromosome 5 open reading frame 41##AY139008|C5orf41|153222|chromosome 5 open reading frame 41##BC041709|C5orf41|153222|chromosome 5 open reading frame 41##AY174896|C5orf41|153222|chromosome 5 open reading frame 41##AK124117|C5orf41|153222|chromosome 5 open reading frame 41##BX647573|C5orf41|153222|chromosome 5 open reading frame 41##AK291677|C5orf41|153222|chromosome 5 open reading frame 41##AB021133|NKX2-5|1482|NK2 homeobox 5##DQ893313|NKX2-5|1482|NK2 homeobox 5##DQ894104|NKX2-5|1482|NK2 homeobox 5##DQ896627|NKX2-5|1482|NK2 homeobox 5##BC025711|NKX2-5|1482|NK2 homeobox 5##AK290615|NKX2-5|1482|NK2 homeobox 5##AK307249|NKX2-5|1482|NK2 homeobox 5##AK297844|NKX2-5|1482|NK2 homeobox 5##AK307218|NKX2-5|1482|NK2 homeobox 5##AK309495|NKX2-5|1482|NK2 homeobox 5##U34962|NKX2-5|1482|NK2 homeobox 5##AK307247|NKX2-5|1482|NK2 homeobox 5##NM_001166175|NKX2-5|1482|NK2 homeobox 5##NM_001166176|NKX2-5|1482|NK2 homeobox 5##NM_004387|NKX2-5|1482|NK2 homeobox 5##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2	0.964273	CTCF.p2:4:0.964
chr5	83014151	83014282	reg1010090.p1	11.577	+	NM_001126336 NM_001164097 NM_001164098 NM_004385 TSC_hg19_v1_chr5_+_82767562 U16306 U26555 X15998 AK307642 AB209491 BC050524 D32039	-246599	+	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	-640833	+	TSC_hg19_v1_chr5_-_82373255 NM_174909	-640954	-	AK313713 NM_001884 X17405 X78076 X78075	2718	-	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	666030	-	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	666448	-	NM_001126336|VCAN|1462|versican##NM_001164097|VCAN|1462|versican##NM_001164098|VCAN|1462|versican##NM_004385|VCAN|1462|versican##U16306|VCAN|1462|versican##U26555|VCAN|1462|versican##X15998|VCAN|1462|versican##AK307642|VCAN|1462|versican##AB209491|VCAN|1462|versican##BC050524|VCAN|1462|versican##D32039|VCAN|1462|versican##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_174909|TMEM167A|153339|transmembrane protein 167A##AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	0.995136	CTCF.p2:-2:0.995
chr3	107646467	107646620	reg1009295.p1	11.576	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-404694	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-550233	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-686951	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	163330	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	294749	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	368858	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.986321	CTCF.p2:-11:0.986
chr8	58909665	58909786	reg1008389.p1	11.576	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-2568	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1003299	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1003323	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	414160	+	X56088 M93133 BC101777 BC112184 NM_000780	502982	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	556027	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.299425	CTCF.p2:-10:0.299
chr11	64455982	64456114	reg1007915.p1	11.575	+	TSC_hg19_v1_chr11_-_64410785 NM_138734	-45257	-	BC043422 TSC_hg19_v1_chr11_-_64377473	-78646	-	AB050269 NM_144585 NM_153378	-97767	+	TSC_hg19_v1_chr11_-_64490666 AB023138 BC150275 NM_015080 NM_138732	34617	-	HQ258466 AB590919 TSC_hg19_v1_chr11_-_64510439	54348	-	TSC_hg19_v1_chr11_-_64510461 AK314637	54420	-	NM_138734|NRXN2|9379|neurexin 2##AB050269|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_144585|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_153378|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##AB023138|NRXN2|9379|neurexin 2##BC150275|NRXN2|9379|neurexin 2##NM_015080|NRXN2|9379|neurexin 2##NM_138732|NRXN2|9379|neurexin 2##HQ258466|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AK314637|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)	0.708785	CTCF.p2:-4:0.709
chr3	27175816	27175935	reg1008881.p1	11.575	+	BC067784 TSC_hg19_v1_chr3_+_26664296 AF396933 NM_052953	-511575	+	TSC_hg19_v1_chr3_+_25831590 NM_001145391 NM_017897 AK000611 AK304821 AK225260 BC008202	-1344295	+	AK296047 NM_001145294	-1344363	-	TSC_hg19_v1_chr3_-_27410884 AK123061 NM_199347	235038	-	AF047033 AF089726 NM_003615	322369	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	349950	-	BC067784|LRRC3B|116135|leucine rich repeat containing 3B##AF396933|LRRC3B|116135|leucine rich repeat containing 3B##NM_052953|LRRC3B|116135|leucine rich repeat containing 3B##NM_001145391|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##NM_017897|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK000611|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK304821|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK225260|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##BC008202|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK296047|NGLY1|55768|N-glycanase 1##NM_001145294|NGLY1|55768|N-glycanase 1##AK123061|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##NM_199347|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7	0.98783	CTCF.p2:-14:0.988
chr5	115403873	115403993	reg1006758.p2	11.575	+	NM_001195581	-16771	+	AK291655 BC068560 NM_173800 BC060869 AY560010 BC109022 BC109023	-105722	+	TSC_hg19_v1_chr5_+_115177642 NM_001284 BX647735 U91932 BC000804 D63643 BC012614 X99458 DQ891198 DQ894381 AK311843 BT009833 CR450341	-226258	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	16788	+	TSC_hg19_v1_chr5_+_115898220 D28352	494291	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	506581	-	NM_001195581|LOC644100|644100|uncharacterized LOC644100##AK291655|AQPEP|206338|laeverin##BC068560|AQPEP|206338|laeverin##NM_173800|AQPEP|206338|laeverin##BC060869|AQPEP|206338|laeverin##AY560010|AQPEP|206338|laeverin##BC109022|AQPEP|206338|laeverin##BC109023|AQPEP|206338|laeverin##NM_001284|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BX647735|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##U91932|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC000804|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##D63643|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC012614|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##X99458|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ891198|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ894381|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##AK311843|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BT009833|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##CR450341|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	0.998995	CTCF.p2:0:0.999
chr9	66915333	66915466	reg1009065.p1	11.575	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-362124	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-421203	-	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	-456903	-	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	1011417	+	TSC_hg19_v1_chr9_+_68726468 AK311167	1811103	+	TSC_hg19_v1_chr9_+_69065493 AK311167	2150139	+	BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene	0.99859	CTCF.p2:-9:0.999
chr11	124706984	124707103	reg1007714.p1	11.574	+	TSC_hg19_v1_chr11_-_124670286 BC064919 AK026995 NM_024631	-36724	-	TSC_hg19_v1_chr11_-_124670282 AK303902	-36774	-	CU677755 DQ891768 DQ894952 BC016868 TSC_hg19_v1_chr11_-_124632187 AF361746 AY358382 AK075396 AK301160 AK314710 NM_138961	-74907	-	AY509035 TSC_hg19_v1_chr11_+_124735327 AK056544 NM_022370 AK291045	28282	+	TSC_hg19_v1_chr11_+_124746737 AK024697 AK225076 AK298792 AK295475	39687	+	AY358083 AK074163 AK302628 BC064643 BC039602 BC111562 BC111748 AK027852 AK289769 AF361473 NM_019055	60712	-	BC064919|C11orf61|79684|chromosome 11 open reading frame 61##AK026995|C11orf61|79684|chromosome 11 open reading frame 61##NM_024631|C11orf61|79684|chromosome 11 open reading frame 61##AK303902|C11orf61|79684|chromosome 11 open reading frame 61##DQ891768|ESAM|90952|endothelial cell adhesion molecule##DQ894952|ESAM|90952|endothelial cell adhesion molecule##BC016868|ESAM|90952|endothelial cell adhesion molecule##AF361746|ESAM|90952|endothelial cell adhesion molecule##AY358382|ESAM|90952|endothelial cell adhesion molecule##AK075396|ESAM|90952|endothelial cell adhesion molecule##AK301160|ESAM|90952|endothelial cell adhesion molecule##AK314710|ESAM|90952|endothelial cell adhesion molecule##NM_138961|ESAM|90952|endothelial cell adhesion molecule##AY509035|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##NM_022370|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK291045|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK024697|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK225076|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK298792|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK295475|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AY358083|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK074163|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK302628|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC064643|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC039602|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC111562|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC111748|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK027852|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK289769|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AF361473|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##NM_019055|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)	0.997674	CTCF.p2:13:0.998
chr10	14541068	14541183	reg1006264.p1	11.573	+	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	-168275	-	TSC_hg19_v1_chr10_-_14050453 AK001072	-490633	-	TSC_hg19_v1_chr10_-_13749648 AK057828	-791436	-	TSC_hg19_v1_chr10_-_14646259 BC064407	105192	-	TSC_hg19_v1_chr10_-_14646423 BC072452	105304	-	AK127413 NM_031453	275770	-	AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##AK001072|FRMD4A|55691|FERM domain containing 4A##AK057828|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B##AK127413|FAM107B|83641|family with sequence similarity 107, member B##NM_031453|FAM107B|83641|family with sequence similarity 107, member B	0.98833	CTCF.p2:-22:0.988
chr14	32395396	32395513	reg1009641.p1	11.572	+	AK093789 NM_001201574	-211680	+	AK301447 NM_001201573	-348333	+	TSC_hg19_v1_chr14_+_32030642 NM_025152 AK316445 BX248028 AK295326 BC024919 AK022722 CU692938	-364797	+	TSC_hg19_v1_chr14_+_32546174 BC050059	150725	+	TSC_hg19_v1_chr14_+_32546223 BC075799	150791	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	151052	+	AK093789|NUBPL|80224|nucleotide binding protein-like##NM_001201574|NUBPL|80224|nucleotide binding protein-like##AK301447|NUBPL|80224|nucleotide binding protein-like##NM_001201573|NUBPL|80224|nucleotide binding protein-like##NM_025152|NUBPL|80224|nucleotide binding protein-like##AK316445|NUBPL|80224|nucleotide binding protein-like##BX248028|NUBPL|80224|nucleotide binding protein-like##AK295326|NUBPL|80224|nucleotide binding protein-like##BC024919|NUBPL|80224|nucleotide binding protein-like##AK022722|NUBPL|80224|nucleotide binding protein-like##BC050059|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5	0.996967	CTCF.p2:-3:0.997
chr9	70671513	70671655	reg1009930.p1	11.572	+	TSC_hg19_v1_chr9_-_70490188 NM_001024916 NM_201453	-181408	-	BC141856 TSC_hg19_v1_chr9_-_70490153 BC067803 AK292585	-181434	-	AK293173 TSC_hg19_v1_chr9_-_70490138	-181444	-	NM_201453 AK293173 AY344633 AK297912 BC069006 BC082271 AF265442 CU688346	185308	+	AY344641 AY344642 NM_199135 BC137365 BC137366 EU446685 BC103887	246240	+	BC033073 NM_021965	300230	+	NM_001024916|CBWD5|220869|COBW domain containing 5##NM_201453|CBWD3|445571|COBW domain containing 3##BC141856|CBWD5|220869|COBW domain containing 5##BC067803|CBWD5|220869|COBW domain containing 5##AK292585|CBWD5|220869|COBW domain containing 5##AK293173|CBWD6|644019|COBW domain containing 6##NM_201453|CBWD3|445571|COBW domain containing 3##AK293173|CBWD6|644019|COBW domain containing 6##AY344633|CBWD3|445571|COBW domain containing 3##AK297912|CBWD3|445571|COBW domain containing 3##BC069006|CBWD6|644019|COBW domain containing 6##BC082271|CBWD5|220869|COBW domain containing 5##AF265442|CBWD5|220869|COBW domain containing 5##AY344641|FOXD4L3|286380|forkhead box D4-like 3##AY344642|FOXD4L3|286380|forkhead box D4-like 3##NM_199135|FOXD4L3|286380|forkhead box D4-like 3##BC137365|FOXD4L6|653404|forkhead box D4-like 6##BC137366|FOXD4L6|653404|forkhead box D4-like 6##EU446685|FOXD4L6|653404|forkhead box D4-like 6##BC103887|FOXD4L6|653404|forkhead box D4-like 6##BC033073|PGM5|5239|phosphoglucomutase 5##NM_021965|PGM5|5239|phosphoglucomutase 5	0.978389	CTCF.p2:-14:0.978
chr4	156363589	156363690	reg1007692.p1	11.571	+	TSC_hg19_v1_chr4_-_156298108 AK024812 AY690636 NM_001039580	-65528	-	TSC_hg19_v1_chr4_-_156297990 AK301075 BC146864 BC128540 BC128541 BC056683	-65631	-	TSC_hg19_v1_chr4_-_156297959 BC022852	-65684	-	NM_000856 NM_001130682 NM_001130686 NM_001130687 X66534 Y15723 AK312952 BC095395 TSC_hg19_v1_chr4_+_156587999 AK309950 AK096588 NM_001130683 NM_001130685 BX649180 AK226125 BX647200 BC012627	224536	+	TSC_hg19_v1_chr4_+_156588813 NM_001130684 BC028384	225178	+	NM_000857 TSC_hg19_v1_chr4_+_156680190 AK315944 AK300296 AK315199 AK296680 AK307838 BC026332 BC060835 BC047620 X66533 AF020340	316565	+	AK024812|MAP9|79884|microtubule-associated protein 9##AY690636|MAP9|79884|microtubule-associated protein 9##NM_001039580|MAP9|79884|microtubule-associated protein 9##AK301075|MAP9|79884|microtubule-associated protein 9##BC146864|MAP9|79884|microtubule-associated protein 9##BC128540|MAP9|79884|microtubule-associated protein 9##BC128541|MAP9|79884|microtubule-associated protein 9##BC056683|MAP9|79884|microtubule-associated protein 9##BC022852|MAP9|79884|microtubule-associated protein 9##NM_000856|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130682|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130686|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130687|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##X66534|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##Y15723|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK312952|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC095395|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK309950|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK096588|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130683|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130685|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BX649180|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK226125|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BX647200|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC012627|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130684|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC028384|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	0.995859	CTCF.p2:-11:0.996
chr6	36986491	36986639	reg1006102.p2	11.571	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-13064	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-32295	-	AK022783 TSC_hg19_v1_chr6_-_36953950 AF176006 AF192559 BC125055 BC153873 NM_014341 BC110914	-32588	-	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	151557	+	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	238821	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	239034	+	BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##AK022783|MTCH1|23787|mitochondrial carrier 1##AF176006|MTCH1|23787|mitochondrial carrier 1##AF192559|MTCH1|23787|mitochondrial carrier 1##BC125055|MTCH1|23787|mitochondrial carrier 1##BC153873|MTCH1|23787|mitochondrial carrier 1##NM_014341|MTCH1|23787|mitochondrial carrier 1##BC110914|MTCH1|23787|mitochondrial carrier 1##NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B	1.805395	CTCF.p2:-22:0.995	CTCF.p2:35:0.811
chr13	28107339	28107475	reg1008837.p1	11.570	+	AF265440 TSC_hg19_v1_chr13_-_28024702 BC046166 NM_001166263 NM_152912	-82685	-	TSC_hg19_v1_chr13_-_28024327 BC039599 NM_001166262 NM_001166261	-83098	-	BC143711 D32257 NM_002097 TSC_hg19_v1_chr13_+_27998761 AB590496 U14134 U20272	-108636	+	BC036755 TSC_hg19_v1_chr13_-_28194667	87197	-	TSC_hg19_v1_chr13_-_28194723 AK313394 NM_153371	87320	-	TSC_hg19_v1_chr13_+_28194948 NM_001206559 AK307356	87558	+	BC046166|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166263|MTIF3|219402|mitochondrial translational initiation factor 3##NM_152912|MTIF3|219402|mitochondrial translational initiation factor 3##BC039599|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166262|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166261|MTIF3|219402|mitochondrial translational initiation factor 3##BC143711|GTF3A|2971|general transcription factor IIIA##D32257|GTF3A|2971|general transcription factor IIIA##NM_002097|GTF3A|2971|general transcription factor IIIA##U14134|GTF3A|2971|general transcription factor IIIA##U20272|GTF3A|2971|general transcription factor IIIA##BC036755|LNX2|222484|ligand of numb-protein X 2##AK313394|LNX2|222484|ligand of numb-protein X 2##NM_153371|LNX2|222484|ligand of numb-protein X 2##NM_001206559|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK307356|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa	1.030229	CTCF.p2:-3:0.998
chr7	21301503	21301617	reg1007790.p1	11.570	+	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	-475026	-	TSC_hg19_v1_chr7_-_20826429 AK299947	-475132	-	TSC_hg19_v1_chr7_-_20825382 AB464710	-476178	-	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	166259	+	AB591008 TSC_hg19_v1_chr7_+_21468356	166764	+	AJ320497 NM_003777	281272	+	AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor##AK299947|SP8|221833|Sp8 transcription factor##AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11	0.039245	
chr12	117804970	117805094	reg1006405.p1	11.569	+	AK294435 AF446135 EU753241 U17327 AK307481 NM_000620 NM_001204218	-5524	-	AF446136 TSC_hg19_v1_chr12_-_117799037	-6011	-	NM_001204214	-57818	-	NM_173598	600995	-	NM_001130112 NM_001206801 NM_007370 NM_181578 TSC_hg19_v1_chr12_+_118454507 AK291107 AK094575 AK290685 BC001866 BC013961 AB208992 BC020440 L07540 AB464140 CU674898 CR407651	649536	+	AK310892 TSC_hg19_v1_chr12_-_118498977 BC015887 AK298513 AF229181 NM_018639	693903	-	AK294435|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446135|NOS1|4842|nitric oxide synthase 1 (neuronal)##EU753241|NOS1|4842|nitric oxide synthase 1 (neuronal)##U17327|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK307481|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_000620|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204218|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446136|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_173598|KSR2|283455|kinase suppressor of ras 2##NM_001130112|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_001206801|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_007370|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_181578|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK291107|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK094575|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK290685|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC001866|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC013961|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AB208992|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC020440|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##L07540|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##CR407651|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK310892|WSB2|55884|WD repeat and SOCS box containing 2##BC015887|WSB2|55884|WD repeat and SOCS box containing 2##AK298513|WSB2|55884|WD repeat and SOCS box containing 2##AF229181|WSB2|55884|WD repeat and SOCS box containing 2##NM_018639|WSB2|55884|WD repeat and SOCS box containing 2	0.910857	CTCF.p2:-14:0.911
chr3	183278487	183278599	reg1006891.p2	11.569	+	AF441792 CU689348 DQ894788 EU176275 TSC_hg19_v1_chr3_-_183273495 AK097125 AK314473 BX648370 BC032348 NM_130446	-5091	-	TSC_hg19_v1_chr3_+_183165436 AK057000	-113113	+	NM_015078 BC064632 AK124500 AK310962	-132604	-	BC142993 TSC_hg19_v1_chr3_+_183353410 AK026326 AY422472 BX648466 BX648812 NM_017644	74857	+	TSC_hg19_v1_chr3_+_183415597 AB033023 BC150273 NM_018023	137079	+	TSC_hg19_v1_chr3_-_183543366 BC006434 AK022810 NM_024871	264826	-	AF441792|KLHL6|89857|kelch-like 6 (Drosophila)##DQ894788|KLHL6|89857|kelch-like 6 (Drosophila)##EU176275|KLHL6|89857|kelch-like 6 (Drosophila)##AK097125|KLHL6|89857|kelch-like 6 (Drosophila)##AK314473|KLHL6|89857|kelch-like 6 (Drosophila)##BX648370|KLHL6|89857|kelch-like 6 (Drosophila)##BC032348|KLHL6|89857|kelch-like 6 (Drosophila)##NM_130446|KLHL6|89857|kelch-like 6 (Drosophila)##AK057000|LOC100505687|100505687|uncharacterized LOC100505687##NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC142993|KLHL24|54800|kelch-like 24 (Drosophila)##AK026326|KLHL24|54800|kelch-like 24 (Drosophila)##AY422472|KLHL24|54800|kelch-like 24 (Drosophila)##BX648466|KLHL24|54800|kelch-like 24 (Drosophila)##BX648812|KLHL24|54800|kelch-like 24 (Drosophila)##NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)##AB033023|YEATS2|55689|YEATS domain containing 2##BC150273|YEATS2|55689|YEATS domain containing 2##NM_018023|YEATS2|55689|YEATS domain containing 2##BC006434|MAP6D1|79929|MAP6 domain containing 1##AK022810|MAP6D1|79929|MAP6 domain containing 1##NM_024871|MAP6D1|79929|MAP6 domain containing 1	0.984693	CTCF.p2:8:0.985
chrX	119924038	119924159	reg1008096.p1	11.569	+	TSC_hg19_v1_chrX_-_119763907 BC011930 AY358642 AF161552 AY159319 AB084170 AF177284 AK290111 BC012502 BC050441 AJ238398 NM_001011551 NM_152692	-160194	-	TSC_hg19_v1_chrX_+_119738553 NM_001137554 AK294834	-185536	+	TSC_hg19_v1_chrX_+_119737985 BC001013 CU674498 AY364258	-186061	+	NM_001145718	85680	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	142052	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080141 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	146913	-	BC011930|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AY358642|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AF161552|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AY159319|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AB084170|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AF177284|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AK290111|C1GALT1C1|29071|C1GALT1-specific chaperone 1##BC012502|C1GALT1C1|29071|C1GALT1-specific chaperone 1##BC050441|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AJ238398|C1GALT1C1|29071|C1GALT1-specific chaperone 1##NM_001011551|C1GALT1C1|29071|C1GALT1-specific chaperone 1##NM_152692|C1GALT1C1|29071|C1GALT1-specific chaperone 1##NM_001137554|MCTS1|28985|malignant T cell amplified sequence 1##AK294834|MCTS1|28985|malignant T cell amplified sequence 1##BC001013|MCTS1|28985|malignant T cell amplified sequence 1##AY364258|MCTS1|28985|malignant T cell amplified sequence 1##NM_001145718|CT47B1|643311|cancer/testis antigen family 47, member B1##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11	0.970969	CTCF.p2:-30:0.971
chr7	157225742	157225893	reg1007991.p2	11.568	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	-96106	+	TSC_hg19_v1_chr7_+_157023934 AK098447	-201811	+	D13635 TSC_hg19_v1_chr7_+_156931668 BC014029	-294134	+	TSC_hg19_v1_chr7_+_157647233 BC034557	421457	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	1154636	-	BC028618 TSC_hg19_v1_chr7_-_158497496 AK092008 AX747307 BC043404 BX537845 NM_017760	1271660	-	AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##D13635|UBE3C|9690|ubiquitin protein ligase E3C##BC014029|UBE3C|9690|ubiquitin protein ligase E3C##BC034557|LOC100506585|100506585|uncharacterized LOC100506585##DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC028618|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK092008|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BC043404|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BX537845|NCAPG2|54892|non-SMC condensin II complex, subunit G2##NM_017760|NCAPG2|54892|non-SMC condensin II complex, subunit G2	0.312258	CTCF.p2:-6:0.312
chr12	14264300	14264443	reg1010024.p1	11.567	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-131385	-	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-914642	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-914654	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	254264	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	273901	+	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	456238	-	BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1	0.021339	
chr13	107188893	107189025	reg1007799.p3	11.567	+	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	-1610	-	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-1070368	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	-1070655	+	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	31526	-	NM_001080396	1330500	-	NM_002312 X83441	1678170	-	BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A##NM_002312|LIG4|3981|ligase IV, DNA, ATP-dependent##X83441|LIG4|3981|ligase IV, DNA, ATP-dependent	0.464937	CTCF.p2:12:0.465
chr15	58335541	58335659	reg1008873.p1	11.567	+	AB015228 AB015227 NM_170697	-29361	-	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	-336620	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	-336714	+	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	22278	-	NM_001206897 NM_003888 NM_170696	22520	-	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	94886	+	AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9	0.965608	CTCF.p2:6:0.966
chr15	42196846	42196967	reg1006277.p2	11.566	+	AF233523 NM_016642	-10632	-	AK310651 NM_001114633 AK299419	-65879	+	TSC_hg19_v1_chr15_+_42120310 AK289833 NM_001114632 NM_001198588 NM_005090 AB209150 AK000814 BC139899 AK000663 AK225503 AK000550 BC067834 AF065215 AK290051 DQ523799 DQ523800 AF121908 BC110415 BC025290 CU692962	-76648	+	TSC_hg19_v1_chr15_-_42264741 CU690850 DQ892745 DQ895991 BC077716 AF454953 BC006287 AF307137 AF323924 BC051823	67810	-	AK074621 AK292634 TSC_hg19_v1_chr15_-_42264753 AK024902 NM_139265	67847	-	NM_001206670	145994	-	AF233523|SPTBN5|51332|spectrin, beta, non-erythrocytic 5##NM_016642|SPTBN5|51332|spectrin, beta, non-erythrocytic 5##AK310651|PLA2G4B|100137049|phospholipase A2, group IVB (cytosolic)##NM_001114633|PLA2G4B|100137049|phospholipase A2, group IVB (cytosolic)##AK299419|PLA2G4B|100137049|phospholipase A2, group IVB (cytosolic)##AK289833|JMJD7|100137047|jumonji domain containing 7##NM_001114632|JMJD7|100137047|jumonji domain containing 7##NM_001198588|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##NM_005090|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AB209150|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AK000814|JMJD7|100137047|jumonji domain containing 7##BC139899|JMJD7|100137047|jumonji domain containing 7##AK000663|JMJD7|100137047|jumonji domain containing 7##AK225503|JMJD7|100137047|jumonji domain containing 7##AK000550|JMJD7|100137047|jumonji domain containing 7##BC067834|JMJD7|100137047|jumonji domain containing 7##AF065215|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AK290051|JMJD7|100137047|jumonji domain containing 7##DQ523799|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##DQ523800|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AF121908|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##BC110415|JMJD7|100137047|jumonji domain containing 7##BC025290|JMJD7|100137047|jumonji domain containing 7##DQ892745|EHD4|30844|EH-domain containing 4##DQ895991|EHD4|30844|EH-domain containing 4##BC077716|EHD4|30844|EH-domain containing 4##AF454953|EHD4|30844|EH-domain containing 4##BC006287|EHD4|30844|EH-domain containing 4##AF307137|EHD4|30844|EH-domain containing 4##AF323924|EHD4|30844|EH-domain containing 4##BC051823|EHD4|30844|EH-domain containing 4##AK074621|EHD4|30844|EH-domain containing 4##AK292634|EHD4|30844|EH-domain containing 4##AK024902|EHD4|30844|EH-domain containing 4##NM_139265|EHD4|30844|EH-domain containing 4##NM_001206670|PLA2G4E|123745|phospholipase A2, group IVE	0.995933	CTCF.p2:-2:0.996
chr19	13323766	13323906	reg1011284.p1	11.565	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-59656	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-62544	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-62697	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	293340	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	518743	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	534883	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.998859	CTCF.p2:5:0.999
chr3	63336967	63337116	reg1010050.p1	11.565	+	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	-73124	+	AF458662 AB593079 TSC_hg19_v1_chr3_-_62861056 AB032947 NM_003716 NM_183393 NM_183394	-475997	-	TSC_hg19_v1_chr3_-_62860565 AB587314	-476409	-	NM_144642 AK315958 AK312465	91758	+	NM_001080537 AK126350	301317	+	TSC_hg19_v1_chr3_-_63849482 CU688000 CR457373 BC065012 AK225110	512431	-	NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin##AF458662|CADPS|8618|Ca++-dependent secretion activator##AB593079|CADPS|8618|Ca++-dependent secretion activator##AB032947|CADPS|8618|Ca++-dependent secretion activator##NM_003716|CADPS|8618|Ca++-dependent secretion activator##NM_183393|CADPS|8618|Ca++-dependent secretion activator##NM_183394|CADPS|8618|Ca++-dependent secretion activator##NM_144642|SYNPR|132204|synaptoporin##AK315958|SYNPR|132204|synaptoporin##AK312465|SYNPR|132204|synaptoporin##NM_001080537|SNTN|132203|sentan, cilia apical structure protein##AK126350|SNTN|132203|sentan, cilia apical structure protein##CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)##BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)##AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)	0.370163	CTCF.p2:-5:0.370
chr14	65689194	65689320	reg1007483.p2	11.564	+	TSC_hg19_v1_chr14_-_65569238 BC013669 NM_002382 NM_145112 NM_145113 NM_145114 NM_145116 NM_197957 AK290929 AL833643	-120019	-	AB463901 AY353088 CR542191 CU693010 X60287 M64240 AK292630 AK292189 BC003525 BC004516 AK290130 TSC_hg19_v1_chr14_-_65569205 BC036092 BC027924 BC025685	-120125	-	BC035148 BC052775 TSC_hg19_v1_chr14_+_65453967	-235291	+	AJ536056 NM_004480 NM_178155 NM_178156	188052	+	TSC_hg19_v1_chr14_+_65878582 BC142958 AK292413 AK294242 Y17976 Y17977	189363	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	190069	-	BC013669|MAX|4149|MYC associated factor X##NM_002382|MAX|4149|MYC associated factor X##NM_145112|MAX|4149|MYC associated factor X##NM_145113|MAX|4149|MYC associated factor X##NM_145114|MAX|4149|MYC associated factor X##NM_145116|MAX|4149|MYC associated factor X##NM_197957|MAX|4149|MYC associated factor X##AK290929|MAX|4149|MYC associated factor X##AL833643|MAX|4149|MYC associated factor X##AY353088|MAX|4149|MYC associated factor X##CR542191|MAX|4149|MYC associated factor X##X60287|MAX|4149|MYC associated factor X##M64240|MAX|4149|MYC associated factor X##AK292630|MAX|4149|MYC associated factor X##AK292189|MAX|4149|MYC associated factor X##BC003525|MAX|4149|MYC associated factor X##BC004516|MAX|4149|MYC associated factor X##AK290130|MAX|4149|MYC associated factor X##BC036092|MAX|4149|MYC associated factor X##BC027924|MAX|4149|MYC associated factor X##BC025685|MAX|4149|MYC associated factor X##AJ536056|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_004480|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178155|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178156|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431	0.969625	CTCF.p2:-4:0.940
chr16	15859863	15859996	reg1008887.p1	11.564	+	TSC_hg19_v1_chr16_-_15835382 D10667	-24482	-	BX641087 TSC_hg19_v1_chr16_-_15833973	-25974	-	NM_017668 BC001421 TSC_hg19_v1_chr16_+_15744101 AK000108 AK025815	-115822	+	BC101677 BC104906 BC143364 AB020673 AY520816 AY520817 TSC_hg19_v1_chr16_-_15950886 AK308389 BC031040 EU489063 NM_001040113 NM_001040114 NM_002474 NM_022844	90940	-	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	122524	-	AL832498 TSC_hg19_v1_chr16_-_15982471	122556	-	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle##BX641087|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_017668|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC001421|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK000108|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK025815|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC101677|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC104906|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC143364|MYH11|4629|myosin, heavy chain 11, smooth muscle##AB020673|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520816|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520817|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK308389|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC031040|MYH11|4629|myosin, heavy chain 11, smooth muscle##EU489063|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040113|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040114|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_002474|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_022844|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##AL832498|FOPNL|123811|FGFR1OP N-terminal like	0.951125	CTCF.p2:-19:0.951
chr5	175128149	175128278	reg1007252.p1	11.564	+	NM_022304	-19750	+	TSC_hg19_v1_chr5_+_175085101 AB023487	-43102	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	-43175	+	TSC_hg19_v1_chr5_+_175223538 NM_006650 U35100	95351	+	TSC_hg19_v1_chr5_+_175298517 AY576870 NM_001008220 AK124837	170296	+	TSC_hg19_v1_chr5_+_175298551 AK314177	170332	+	NM_022304|HRH2|3274|histamine receptor H2##AB023487|HRH2|3274|histamine receptor H2##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2##NM_006650|CPLX2|10814|complexin 2##U35100|CPLX2|10814|complexin 2##AY576870|CPLX2|10814|complexin 2##NM_001008220|CPLX2|10814|complexin 2##AK124837|CPLX2|10814|complexin 2##AK314177|CPLX2|10814|complexin 2	0.744998	CTCF.p2:7:0.745
chr1	21558600	21558732	reg1007474.p1	11.563	+	TSC_hg19_v1_chr1_-_21503387 NM_001198801 NM_001198802	-55296	-	TSC_hg19_v1_chr1_-_21503344 BC072413 AB209119	-55342	-	BC030578 NM_001198803	-57427	-	D43698 TSC_hg19_v1_chr1_-_21606025 BX648351 NM_001113347	47417	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	58042	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	58268	-	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##D43698|ECE1|1889|endothelin converting enzyme 1##BX648351|ECE1|1889|endothelin converting enzyme 1##NM_001113347|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1	0.999573	CTCF.p2:-21:1.000
chr5	123273029	123273146	reg1010258.p1	11.563	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-425205	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-513943	-	NM_001136239 AK297992 AF272898 AF272899	-848243	+	BC131507 AB033107 BC151226 NM_020747	807701	-	NM_001146319 AK316288 AK300154	2422727	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	2485756	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.939688	CTCF.p2:-17:0.940
chr7	156266292	156266419	reg1008377.p1	11.563	+	AB464234 TSC_hg19_v1_chr7_-_155604951 L38518 NM_000193	-661465	-	AY927450 AY927452 AY927453 AY927454 AY927455 TSC_hg19_v1_chr7_-_155601833	-664557	-	TSC_hg19_v1_chr7_+_155437354 AK307515	-828987	+	AF063598 TSC_hg19_v1_chr7_-_156433234 BC050364 BC058889 BC031037 BC070228 AK056371 AF439977	166876	-	NM_030936 TSC_hg19_v1_chr7_+_156433487 AK314067 NM_001184996 AL136874 BC028120 AK307316	167110	+	NM_001184997 AF325690	169340	+	L38518|SHH|6469|sonic hedgehog##NM_000193|SHH|6469|sonic hedgehog##AY927450|SHH|6469|sonic hedgehog##AK307515|RBM33|155435|RNA binding motif protein 33##AF063598|C7orf13|129790|chromosome 7 open reading frame 13##BC050364|C7orf13|129790|chromosome 7 open reading frame 13##BC031037|C7orf13|129790|chromosome 7 open reading frame 13##BC070228|C7orf13|129790|chromosome 7 open reading frame 13##AK056371|C7orf13|129790|chromosome 7 open reading frame 13##AF439977|C7orf13|129790|chromosome 7 open reading frame 13##NM_030936|RNF32|140545|ring finger protein 32##AK314067|RNF32|140545|ring finger protein 32##NM_001184996|RNF32|140545|ring finger protein 32##AL136874|RNF32|140545|ring finger protein 32##BC028120|RNF32|140545|ring finger protein 32##AK307316|RNF32|140545|ring finger protein 32##NM_001184997|RNF32|140545|ring finger protein 32##AF325690|RNF32|140545|ring finger protein 32	0.940359	CTCF.p2:10:0.940
chr12	52414647	52414771	reg1009686.p1	11.562	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	-13968	+	AK299496 NM_020327	-67546	+	TSC_hg19_v1_chr12_+_52345493 AK299120 L10125 BC000254 AB384957 BT007072 CU674106 EU831986 EU832079 L10126 U14722 Z22536	-69212	+	AK297526 NM_001202233	1906	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	30507	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	49045	+	BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB##AK299120|ACVR1B|91|activin A receptor, type IB##L10125|ACVR1B|91|activin A receptor, type IB##BC000254|ACVR1B|91|activin A receptor, type IB##BT007072|ACVR1B|91|activin A receptor, type IB##EU831986|ACVR1B|91|activin A receptor, type IB##EU832079|ACVR1B|91|activin A receptor, type IB##L10126|ACVR1B|91|activin A receptor, type IB##U14722|ACVR1B|91|activin A receptor, type IB##Z22536|ACVR1B|91|activin A receptor, type IB##AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44	0.969182	CTCF.p2:5:0.969
chr8	76284802	76284915	reg1007155.p1	11.561	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-387949	+	CR749657 NM_015886	-548087	+	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	-1022168	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	35330	+	BX571750 NM_004133 EU832451 HQ692842	167356	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	1308652	+	NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15##AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4	0.953819	CTCF.p2:22:0.954
chr8	112809567	112809672	reg1007806.p1	11.560	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-1822653	-	NM_001099743 NM_001099744	-2105600	-	AK290469 NM_001099745 NM_001099746	-2116386	-	AB114605 NM_198124	1579762	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	1639510	-	TSC_hg19_v1_chr8_-_116680208 AK304046	3870601	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.694489	CTCF.p2:15:0.694
chr12	723630	723745	reg1007545.p1	11.559	+	AB089940 NM_173593	-154145	+	NM_001130146 NM_032358 AK293165 TSC_hg19_v1_chr12_+_510809 AK027638	-212906	+	TSC_hg19_v1_chr12_-_498451 AK301150 AK301273 AB209999 BC048307 BC053893 NM_001042603 BC092417	-225085	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	28491	+	TSC_hg19_v1_chr12_-_752800 AK298043	29132	-	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	49028	-	AB089940|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_173593|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_001130146|CCDC77|84318|coiled-coil domain containing 77##NM_032358|CCDC77|84318|coiled-coil domain containing 77##AK293165|CCDC77|84318|coiled-coil domain containing 77##AK027638|CCDC77|84318|coiled-coil domain containing 77##AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A##AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A##AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A##BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A##BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A##NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A##BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2	0.897803	CTCF.p2:-15:0.898
chr7	121007031	121007176	reg1006375.p1	11.558	+	AF169963 NM_057168	-38014	+	AF152584 NM_016087	-41683	+	AK025639 AK225313 TSC_hg19_v1_chr7_+_120702920	-304230	+	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	29234	-	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	29311	-	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	506058	+	AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16##AK025639|C7orf58|79974|chromosome 7 open reading frame 58##AK225313|C7orf58|79974|chromosome 7 open reading frame 58##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C##AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1	0.997716	CTCF.p2:-20:0.998
chr19	47232133	47232235	reg1005945.p2	11.557	+	TSC_hg19_v1_chr19_-_47220370 AK300339 AK095884 NM_001079880 NM_001079881 NM_016457	-11802	-	NM_001079882	-14608	-	BC015472 TSC_hg19_v1_chr19_-_47197232	-34985	-	NM_001039885 NM_024301 TSC_hg19_v1_chr19_+_47249314 AK095497 AJ314847 AK022638 AK291282	17125	+	BC014278 AB209003 TSC_hg19_v1_chr19_-_47249674	17471	-	TSC_hg19_v1_chr19_-_47249688 AF212940 AB527410 BC034604	17510	-	AK300339|PRKD2|25865|protein kinase D2##AK095884|PRKD2|25865|protein kinase D2##NM_001079880|PRKD2|25865|protein kinase D2##NM_001079881|PRKD2|25865|protein kinase D2##NM_016457|PRKD2|25865|protein kinase D2##NM_001079882|PRKD2|25865|protein kinase D2##BC015472|PRKD2|25865|protein kinase D2##NM_001039885|FKRP|79147|fukutin related protein##NM_024301|FKRP|79147|fukutin related protein##AK095497|FKRP|79147|fukutin related protein##AJ314847|FKRP|79147|fukutin related protein##AK022638|FKRP|79147|fukutin related protein##AK291282|FKRP|79147|fukutin related protein##BC014278|STRN4|29888|striatin, calmodulin binding protein 4##AB209003|STRN4|29888|striatin, calmodulin binding protein 4##AF212940|STRN4|29888|striatin, calmodulin binding protein 4##BC034604|STRN4|29888|striatin, calmodulin binding protein 4	0.996298	CTCF.p2:2:0.996
chr11	122086237	122086362	reg1009340.p1	11.556	+	BC130361 BC130363 AF303179 NM_001001786	-99438	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-625201	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-763124	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	440248	+	BC070266 AK313578 AF001622 NM_019604	622930	+	AK097534 BC068507 NM_024806 NM_199124	667132	+	BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63	0.921849	CTCF.p2:2:0.922
chr12	40546732	40546853	reg1008147.p1	11.555	+	TSC_hg19_v1_chr12_-_40499870 BC047507	-46920	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	-47103	-	BC038754 NM_001031748 BC048120 AK097445	-526797	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	72067	+	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	539490	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	1035416	+	BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40##NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4	0.996108	CTCF.p2:-8:0.996
chr17	80372471	80372602	reg1006157.p1	11.555	+	BC136490 NM_018949 TSC_hg19_v1_chr17_+_80332304	-40306	+	BC036191 NM_207459 AK093086 AX747912 BC057820 BC050391	-55403	+	TSC_hg19_v1_chr17_-_80291903 NM_003004	-80625	-	TSC_hg19_v1_chr17_+_80376228 NM_173620	3706	+	BC008897 TSC_hg19_v1_chr17_-_80376463 BC023602 AK025875 AK311057 NM_024648 NM_175902	3940	-	TSC_hg19_v1_chr17_+_80376563 BC035561	4058	+	BC136490|UTS2R|2837|urotensin 2 receptor##NM_018949|UTS2R|2837|urotensin 2 receptor##BC036191|TEX19|400629|testis expressed 19##NM_207459|TEX19|400629|testis expressed 19##AK093086|TEX19|400629|testis expressed 19##BC057820|TEX19|400629|testis expressed 19##BC050391|TEX19|400629|testis expressed 19##NM_003004|SECTM1|6398|secreted and transmembrane 1##NM_173620|HEXDC|284004|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing##BC008897|C17orf101|79701|chromosome 17 open reading frame 101##BC023602|C17orf101|79701|chromosome 17 open reading frame 101##AK025875|C17orf101|79701|chromosome 17 open reading frame 101##AK311057|C17orf101|79701|chromosome 17 open reading frame 101##NM_024648|C17orf101|79701|chromosome 17 open reading frame 101##NM_175902|C17orf101|79701|chromosome 17 open reading frame 101##BC035561|HEXDC|284004|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing	0.306897	CTCF.p2:19:0.307
chr19	7102459	7102606	reg1008686.p1	11.555	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-2981	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-32817	+	AK315405 NM_001044387 NM_001044388 NM_024341	-33070	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	191428	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	357475	+	TSC_hg19_v1_chr19_+_7460061 AB011093	357545	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.979549	CTCF.p2:-28:0.980
chr4	77669972	77670098	reg1008274.p1	11.555	+	TSC_hg19_v1_chr4_+_77610738 AK304103	-59284	+	AK027744 TSC_hg19_v1_chr4_+_77610613	-59424	+	AB055660 NM_020859	-313783	+	NM_001029870 BC137241 BC137255	149004	-	TSC_hg19_v1_chr4_+_77870905 BC008083 NM_018243	200850	+	TSC_hg19_v1_chr4_+_77870908 BC064934	200877	+	AK304103|SHROOM3|57619|shroom family member 3##AK027744|SHROOM3|57619|shroom family member 3##AB055660|SHROOM3|57619|shroom family member 3##NM_020859|SHROOM3|57619|shroom family member 3##NM_001029870|ANKRD56|345079|ankyrin repeat domain 56##BC137241|ANKRD56|345079|ankyrin repeat domain 56##BC137255|ANKRD56|345079|ankyrin repeat domain 56##BC008083|SEPT11|55752|septin 11##NM_018243|SEPT11|55752|septin 11##BC064934|SEPT11|55752|septin 11	0.565107	CTCF.p2:11:0.565
chr4	88774327	88774453	reg1010762.p1	11.555	+	AK307774 NM_001184695 NM_001184696 NM_001184697 NM_020203 AJ276396 BC128158 AF325916	-20261	+	AK075076 NM_001184694	-31835	+	NM_004967 TSC_hg19_v1_chr4_+_88720705 J05213	-53669	+	NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 TSC_hg19_v1_chr4_+_88896809 JF412667 BC093033	122420	+	TSC_hg19_v1_chr4_+_88896865 BX648003 J04765 AK057738 AK075463 AK290090 AK296035 BC007016 BC017387 BC022844 AK295491	122462	+	TSC_hg19_v1_chr4_+_88896868 AK290104 M83248 AK315461 AF052124	122489	+	AK307774|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184695|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184696|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184697|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_020203|MEPE|56955|matrix extracellular phosphoglycoprotein##AJ276396|MEPE|56955|matrix extracellular phosphoglycoprotein##BC128158|MEPE|56955|matrix extracellular phosphoglycoprotein##AF325916|MEPE|56955|matrix extracellular phosphoglycoprotein##AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_004967|IBSP|3381|integrin-binding sialoprotein##J05213|IBSP|3381|integrin-binding sialoprotein##NM_000582|SPP1|6696|secreted phosphoprotein 1##NM_001040058|SPP1|6696|secreted phosphoprotein 1##NM_001040060|SPP1|6696|secreted phosphoprotein 1##NM_001251829|SPP1|6696|secreted phosphoprotein 1##NM_001251830|SPP1|6696|secreted phosphoprotein 1##JF412667|SPP1|6696|secreted phosphoprotein 1##BC093033|SPP1|6696|secreted phosphoprotein 1##BX648003|SPP1|6696|secreted phosphoprotein 1##J04765|SPP1|6696|secreted phosphoprotein 1##AK057738|SPP1|6696|secreted phosphoprotein 1##AK075463|SPP1|6696|secreted phosphoprotein 1##AK290090|SPP1|6696|secreted phosphoprotein 1##AK296035|SPP1|6696|secreted phosphoprotein 1##BC007016|SPP1|6696|secreted phosphoprotein 1##BC017387|SPP1|6696|secreted phosphoprotein 1##BC022844|SPP1|6696|secreted phosphoprotein 1##AK295491|SPP1|6696|secreted phosphoprotein 1##AK290104|SPP1|6696|secreted phosphoprotein 1##M83248|SPP1|6696|secreted phosphoprotein 1##AK315461|SPP1|6696|secreted phosphoprotein 1##AF052124|SPP1|6696|secreted phosphoprotein 1	0.910284	CTCF.p2:-12:0.910
chrX	16901476	16901603	reg1007070.p2	11.555	+	TSC_hg19_v1_chrX_-_16888462 NM_002893	-13042	-	TSC_hg19_v1_chrX_-_16888456 X72841	-13088	-	AB463219 CR541701 AK291567 TSC_hg19_v1_chrX_-_16888381 BC114500 BC114501 U35143	-13234	-	TSC_hg19_v1_chrX_+_16964847 AF010233 NM_001080975 NM_004726 AF511533 AF512951	63393	+	TSC_hg19_v1_chrX_+_17393357 AK302437	491815	+	TSC_hg19_v1_chrX_+_17393541 AY436752 NM_198270	492003	+	NM_002893|RBBP7|5931|retinoblastoma binding protein 7##X72841|RBBP7|5931|retinoblastoma binding protein 7##CR541701|RBBP7|5931|retinoblastoma binding protein 7##AK291567|RBBP7|5931|retinoblastoma binding protein 7##BC114500|RBBP7|5931|retinoblastoma binding protein 7##BC114501|RBBP7|5931|retinoblastoma binding protein 7##U35143|RBBP7|5931|retinoblastoma binding protein 7##AF010233|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_001080975|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_004726|REPS2|9185|RALBP1 associated Eps domain containing 2##AF511533|REPS2|9185|RALBP1 associated Eps domain containing 2##AF512951|REPS2|9185|RALBP1 associated Eps domain containing 2##AK302437|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AY436752|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_198270|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	0.39461	CTCF.p2:-2:0.395
chr10	64197504	64197659	reg1010434.p1	11.554	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-63538	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-169042	-	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	-388485	+	AJ505150 NM_199452	82625	+	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	366961	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	367076	+	NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase	0.966836	CTCF.p2:-18:0.967
chr11	46260830	46260940	reg1007685.p1	11.553	+	TSC_hg19_v1_chr11_-_46142986 AK023258 NM_001101802 NM_016621	-117888	-	TSC_hg19_v1_chr11_+_45944226 BC037291	-316669	+	AK055829 AK096021 NM_152312	-317702	+	TSC_hg19_v1_chr11_+_46299212 AK314072 NM_052854	38320	+	BC014097 TSC_hg19_v1_chr11_+_46299557 BC015781 AB063321	38675	+	TSC_hg19_v1_chr11_+_46299596 AB463458 CU680776 DQ895809 EU176365	38738	+	AK023258|PHF21A|51317|PHD finger protein 21A##NM_001101802|PHF21A|51317|PHD finger protein 21A##NM_016621|PHF21A|51317|PHD finger protein 21A##BC037291|GYLTL1B|120071|glycosyltransferase-like 1B##AK055829|GYLTL1B|120071|glycosyltransferase-like 1B##AK096021|GYLTL1B|120071|glycosyltransferase-like 1B##NM_152312|GYLTL1B|120071|glycosyltransferase-like 1B##AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	0.997475	CTCF.p2:-14:0.997
chr11	78275574	78275721	reg1009599.p1	11.553	+	TSC_hg19_v1_chr11_-_78128866 NM_080491	-146771	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	-146841	-	AB011143 BC152459 NM_012296	-222722	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	10145	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	10248	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	876077	-	NM_080491|GAB2|9846|GRB2-associated binding protein 2##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)	0.998852	CTCF.p2:7:0.999
chr14	96890832	96890974	reg1009178.p1	11.553	+	TSC_hg19_v1_chr14_+_96858479 AK057426 NM_152327 BC035256 BC023986 DQ891711 DQ894888	-32441	+	BC004818 NM_016472	-44882	+	TSC_hg19_v1_chr14_+_96829862 AK000796 AK314423 AF151044	-61035	+	TSC_hg19_v1_chr14_+_96968718 NM_001252006 NM_001252007 NM_032632 AK302406 BC036014	77806	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	77843	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	77881	+	AK057426|AK7|122481|adenylate kinase 7##NM_152327|AK7|122481|adenylate kinase 7##BC035256|AK7|122481|adenylate kinase 7##BC023986|AK7|122481|adenylate kinase 7##DQ891711|AK7|122481|adenylate kinase 7##DQ894888|AK7|122481|adenylate kinase 7##BC004818|C14orf129|51527|chromosome 14 open reading frame 129##NM_016472|C14orf129|51527|chromosome 14 open reading frame 129##AK000796|C14orf129|51527|chromosome 14 open reading frame 129##AK314423|C14orf129|51527|chromosome 14 open reading frame 129##AF151044|C14orf129|51527|chromosome 14 open reading frame 129##NM_001252006|PAPOLA|10914|poly(A) polymerase alpha##NM_001252007|PAPOLA|10914|poly(A) polymerase alpha##NM_032632|PAPOLA|10914|poly(A) polymerase alpha##AK302406|PAPOLA|10914|poly(A) polymerase alpha##BC036014|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha	0.054869	
chr15	69121476	69121599	reg1007295.p2	11.553	+	TSC_hg19_v1_chr15_-_69113264 NM_006305	-8277	-	TSC_hg19_v1_chr15_-_69113235 BC007200 BC000608 AF025684 AK312703	-8310	-	AB463390 AY349171 BC106719 BC125143 BT007436 DQ893294 DQ896729 U60823 TSC_hg19_v1_chr15_-_69113208 U73477 X75090 AK223280	-8388	-	NM_001184780 NM_145658 AY358983 AF325189 AF325190 BC017998 AF275321 BC125097 BC125098 CU676134	101378	+	NM_001184779 NM_024505 AF353088 AF353089 AK314689 AK074071	185514	+	TSC_hg19_v1_chr15_+_69452935 BC142975 AY635582 NM_015554 AK098595 BC033828 BC019011	331361	+	NM_006305|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC007200|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC000608|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AF025684|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK312703|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AY349171|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC106719|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC125143|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BT007436|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ893294|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ896729|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U60823|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U73477|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##X75090|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK223280|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##NM_001184780|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_145658|SPESP1|246777|sperm equatorial segment protein 1##AY358983|SPESP1|246777|sperm equatorial segment protein 1##AF325189|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF325190|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC017998|SPESP1|246777|sperm equatorial segment protein 1##AF275321|SPESP1|246777|sperm equatorial segment protein 1##BC125097|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC125098|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AY635582|GLCE|26035|glucuronic acid epimerase##NM_015554|GLCE|26035|glucuronic acid epimerase	0.0	
chr4	39471161	39471324	reg1007781.p1	11.552	+	AK292238 TSC_hg19_v1_chr4_+_39460679 AK303429 NM_006859 NM_194451 AK026289 BC062751 BC023635 AK291985	-10555	+	AK130966 AK303908 AY320412 TSC_hg19_v1_chr4_-_39460532 AL832047 AY597415 AK312241 BC066318 U09953 AK297178 NM_000661	-10694	-	TSC_hg19_v1_chr4_-_39460503 BC000483	-10730	-	AB527640 CU692708 DQ891116 DQ894295 TSC_hg19_v1_chr4_-_39523141	51894	-	TSC_hg19_v1_chr4_-_39529060 AF061016 AJ007702 BC022781 AK097930 AK297737	57765	-	TSC_hg19_v1_chr4_-_39529187 NM_001184700 NM_001184701 NM_003359	57933	-	AK292238|LIAS|11019|lipoic acid synthetase##AK303429|LIAS|11019|lipoic acid synthetase##NM_006859|LIAS|11019|lipoic acid synthetase##NM_194451|LIAS|11019|lipoic acid synthetase##AK026289|LIAS|11019|lipoic acid synthetase##BC062751|LIAS|11019|lipoic acid synthetase##BC023635|LIAS|11019|lipoic acid synthetase##AK291985|LIAS|11019|lipoic acid synthetase##AK130966|RPL9|6133|ribosomal protein L9##AK303908|RPL9|6133|ribosomal protein L9##AY320412|RPL9|6133|ribosomal protein L9##AL832047|RPL9|6133|ribosomal protein L9##AY597415|RPL9|6133|ribosomal protein L9##AK312241|RPL9|6133|ribosomal protein L9##BC066318|RPL9|6133|ribosomal protein L9##U09953|RPL9|6133|ribosomal protein L9##AK297178|RPL9|6133|ribosomal protein L9##NM_000661|RPL9|6133|ribosomal protein L9##BC000483|RPL9|6133|ribosomal protein L9##DQ891116|UGDH|7358|UDP-glucose 6-dehydrogenase##DQ894295|UGDH|7358|UDP-glucose 6-dehydrogenase##AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase##AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase##BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase##AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase##AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001184700|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001184701|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_003359|UGDH|7358|UDP-glucose 6-dehydrogenase	0.99543	CTCF.p2:-10:0.995
chr9	100231029	100231148	reg1006412.p1	11.552	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	-56709	+	TSC_hg19_v1_chr9_+_100174364 NM_014290 BC028694	-56815	+	NM_020893 CR749320	-161150	+	NM_001166116 AK314533	32374	+	TSC_hg19_v1_chr9_+_100263947 BC002660 NM_003275	32850	+	TSC_hg19_v1_chr9_-_100395642 AK094043 AK291199 AX748426 BC035604 BX648493 BX538308 AK128615	164541	-	AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7##NM_014290|TDRD7|23424|tudor domain containing 7##BC028694|TDRD7|23424|tudor domain containing 7##NM_020893|C9orf174|100499483|chromosome 9 open reading frame 174##CR749320|C9orf174|100499483|chromosome 9 open reading frame 174##NM_001166116|TMOD1|7111|tropomodulin 1##AK314533|TMOD1|7111|tropomodulin 1##BC002660|TMOD1|7111|tropomodulin 1##NM_003275|TMOD1|7111|tropomodulin 1##AK094043|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK291199|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BC035604|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX648493|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX538308|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK128615|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2	0.932102	CTCF.p2:-23:0.932
chr2	109544980	109545127	reg1009453.p1	11.551	+	TSC_hg19_v1_chr2_+_109403228 BC050579 AK125199 AK057307 NM_144978 BC015847 BC038421	-141851	+	TSC_hg19_v1_chr2_+_109384621 AY170822	-160370	+	TSC_hg19_v1_chr2_+_109335970 D42063 NM_006267	-209115	+	TSC_hg19_v1_chr2_-_109605623 AK296936	60566	-	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	60694	-	NM_001099289 DQ307286	201010	+	BC050579|CCDC138|165055|coiled-coil domain containing 138##AK125199|CCDC138|165055|coiled-coil domain containing 138##AK057307|CCDC138|165055|coiled-coil domain containing 138##NM_144978|CCDC138|165055|coiled-coil domain containing 138##BC015847|CCDC138|165055|coiled-coil domain containing 138##BC038421|CCDC138|165055|coiled-coil domain containing 138##AY170822|RANBP2|5903|RAN binding protein 2##D42063|RANBP2|5903|RAN binding protein 2##NM_006267|RANBP2|5903|RAN binding protein 2##AK296936|EDAR|10913|ectodysplasin A receptor##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3	0.995009	CTCF.p2:-7:0.995
chr7	123007709	123007819	reg1007694.p1	11.551	+	AB528233 AK026413 AK314537 AF260824 BC111775 NM_022444	-167753	-	BC095524 NM_016945	-372011	-	TSC_hg19_v1_chr7_-_122526793 NM_001009571 NM_001167940 NM_017954	-480968	-	BC091520 BC128181 BC128182 AK093153 AX747958 BC032838 BC068607 NM_178827	166880	-	CR933664 BT006695 TSC_hg19_v1_chr7_-_123197862 AK022209 BC020821 BC070236 BC070237 U64028 AK315458 U53468 BC000813 NM_005000	190126	-	AF428257 BC100874 BC100875 BC100876 BC100877 NM_080928	241329	+	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##BC095524|TAS2R16|50833|taste receptor, type 2, member 16##NM_016945|TAS2R16|50833|taste receptor, type 2, member 16##NM_001009571|CADPS2|93664|Ca++-dependent secretion activator 2##NM_001167940|CADPS2|93664|Ca++-dependent secretion activator 2##NM_017954|CADPS2|93664|Ca++-dependent secretion activator 2##BC091520|IQUB|154865|IQ motif and ubiquitin domain containing##BC128181|IQUB|154865|IQ motif and ubiquitin domain containing##BC128182|IQUB|154865|IQ motif and ubiquitin domain containing##AK093153|IQUB|154865|IQ motif and ubiquitin domain containing##BC032838|IQUB|154865|IQ motif and ubiquitin domain containing##BC068607|IQUB|154865|IQ motif and ubiquitin domain containing##NM_178827|IQUB|154865|IQ motif and ubiquitin domain containing##CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15##NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15	0.010347	
chr10	84729287	84729414	reg1007097.p2	11.550	+	DQ857894 NM_001165973	-1091908	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-1094268	+	AK123978 NM_001145719	-2428776	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	1169907	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	1202442	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	1204209	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.0	
chr1	174739243	174739386	reg1009053.p1	11.550	+	BC095532 NM_005684 CU688296 CU688298 BC067456 BC067457 BC067458 BC067459 BC067460 BC069460 HQ995526	-322084	+	AK095838 TSC_hg19_v1_chr1_+_174128676 AL157958	-610622	+	BC041888 NM_014857 TSC_hg19_v1_chr1_+_174128608	-610714	+	AB007940 NM_001243765	29720	+	NM_001243763 AL049701	104245	+	NM_001035230 BC012094	105355	+	BC095532|GPR52|9293|G protein-coupled receptor 52##NM_005684|GPR52|9293|G protein-coupled receptor 52##BC067456|GPR52|9293|G protein-coupled receptor 52##BC067457|GPR52|9293|G protein-coupled receptor 52##BC067458|GPR52|9293|G protein-coupled receptor 52##BC067459|GPR52|9293|G protein-coupled receptor 52##BC067460|GPR52|9293|G protein-coupled receptor 52##BC069460|GPR52|9293|G protein-coupled receptor 52##HQ995526|GPR52|9293|G protein-coupled receptor 52##AK095838|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL157958|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC041888|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_014857|RABGAP1L|9910|RAB GTPase activating protein 1-like##AB007940|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243765|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243763|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL049701|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001035230|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC012094|RABGAP1L|9910|RAB GTPase activating protein 1-like	0.829135	CTCF.p2:-21:0.829
chr15	44955958	44956095	reg1008878.p1	11.550	+	TSC_hg19_v1_chr15_-_44955887 BC150640 NM_001160227 NM_025137	-146	-	TSC_hg19_v1_chr15_-_44955849 AB385508 AB470308 AB470309 AB470310 AB058743 BC153879 BC047416	-182	-	TSC_hg19_v1_chr15_+_44829374 AK300659	-126644	+	BC036924 NM_001145112	13059	-	AK130783 TSC_hg19_v1_chr15_-_45003540	47520	-	TSC_hg19_v1_chr15_+_45003710 NM_004048 AK303560 AK315776 S82297 S82300 S54761 BC032589 BC064910 X07621 AY007153 AB021288 AB463439 AY187687 CR457066 DQ839493 DQ839494 DQ884406 DQ890551 DQ893711 V00567	47695	+	BC150640|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_001160227|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_025137|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AK300659|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##BC036924|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##NM_001145112|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##NM_004048|B2M|567|beta-2-microglobulin##AK303560|B2M|567|beta-2-microglobulin##AK315776|B2M|567|beta-2-microglobulin##S82297|B2M|567|beta-2-microglobulin##S82300|B2M|567|beta-2-microglobulin##S54761|B2M|567|beta-2-microglobulin##BC032589|B2M|567|beta-2-microglobulin##BC064910|B2M|567|beta-2-microglobulin##X07621|B2M|567|beta-2-microglobulin##AY007153|B2M|567|beta-2-microglobulin##AB021288|B2M|567|beta-2-microglobulin##AY187687|B2M|567|beta-2-microglobulin##CR457066|B2M|567|beta-2-microglobulin##DQ839493|B2M|567|beta-2-microglobulin##DQ839494|B2M|567|beta-2-microglobulin##DQ884406|B2M|567|beta-2-microglobulin##DQ890551|B2M|567|beta-2-microglobulin##DQ893711|B2M|567|beta-2-microglobulin##V00567|B2M|567|beta-2-microglobulin	0.789152	CTCF.p2:-33:0.789
chr15	75086118	75086237	reg1007826.p2	11.549	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	-11321	+	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	-11752	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-44985	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	18995	+	AK024055 NM_001030005 AB072900 BC018026 AY286501	32813	+	TSC_hg19_v1_chr15_-_75135477 AB528889 CU691158 AK075047 BC056423 AK299380	49276	-	X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like##AK024055|CPLX3|594855|complexin 3##NM_001030005|CPLX3|594855|complexin 3##AB072900|CPLX3|594855|complexin 3##BC018026|CPLX3|594855|complexin 3##AY286501|CPLX3|594855|complexin 3##AK075047|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC056423|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK299380|ULK3|25989|unc-51-like kinase 3 (C. elegans)	0.560897	CTCF.p2:9:0.561
chr6	56502506	56502635	reg1008461.p1	11.548	+	BC038763 TSC_hg19_v1_chr6_-_56407722	-94862	-	AF330693 TSC_hg19_v1_chr6_-_56258945	-243646	-	TSC_hg19_v1_chr6_-_56112350 BC045597 AF414088 AL136624 AK313398 NM_030820	-390209	-	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	5069	-	TSC_hg19_v1_chr6_-_56708446 U31850	205902	-	AK294830 TSC_hg19_v1_chr6_-_56716493	213882	-	AF330693|COL21A1|81578|collagen, type XXI, alpha 1##BC045597|COL21A1|81578|collagen, type XXI, alpha 1##AF414088|COL21A1|81578|collagen, type XXI, alpha 1##AL136624|COL21A1|81578|collagen, type XXI, alpha 1##AK313398|COL21A1|81578|collagen, type XXI, alpha 1##NM_030820|COL21A1|81578|collagen, type XXI, alpha 1##AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin##U31850|DST|667|dystonin##AK294830|DST|667|dystonin	0.997505	CTCF.p2:-8:0.998
chr12	45324898	45325040	reg1007596.p2	11.547	+	AK295125 NM_001145110	-17259	-	AK299733 NM_001145107	-54337	-	TSC_hg19_v1_chr12_-_45270158 NM_001145108 NM_006159	-54768	-	AK131230 NM_001004329 TSC_hg19_v1_chr12_-_45444883	119913	-	TSC_hg19_v1_chr12_+_45609769 AK126409 NM_001025356 NM_001142679 NM_001204803 AK310641	284815	+	TSC_hg19_v1_chr12_+_45609845 AK303996	284880	+	AK295125|NELL2|4753|NEL-like 2 (chicken)##NM_001145110|NELL2|4753|NEL-like 2 (chicken)##AK299733|NELL2|4753|NEL-like 2 (chicken)##NM_001145107|NELL2|4753|NEL-like 2 (chicken)##NM_001145108|NELL2|4753|NEL-like 2 (chicken)##NM_006159|NELL2|4753|NEL-like 2 (chicken)##AK131230|DBX2|440097|developing brain homeobox 2##NM_001004329|DBX2|440097|developing brain homeobox 2##AK126409|ANO6|196527|anoctamin 6##NM_001025356|ANO6|196527|anoctamin 6##NM_001142679|ANO6|196527|anoctamin 6##NM_001204803|ANO6|196527|anoctamin 6##AK310641|ANO6|196527|anoctamin 6##AK303996|ANO6|196527|anoctamin 6	0.988008	CTCF.p2:14:0.988
chr15	79043500	79043635	reg1009484.p1	11.547	+	TSC_hg19_v1_chr15_-_78933573 U62439 Y08416 BC096080 BC096081 BC096082 BC096083 NM_000750 U48861	-109994	-	TSC_hg19_v1_chr15_-_78913532 BC098443 BC006114 NM_000743 NM_001166694	-129995	-	AF385584 Y08418 BT006646 BT006897 CU674246 CU675253 M86383 M37981 TSC_hg19_v1_chr15_-_78913298 BC000513 BC001642 BC002996 U62432	-130334	-	TSC_hg19_v1_chr15_+_79102818 AK095823	59260	+	AY327122 AF140675 TSC_hg19_v1_chr15_-_79103698 BC061631 NM_014272 AK299844	60183	-	TSC_hg19_v1_chr15_+_79165157 NM_006791 NM_206839	121607	+	U62439|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##Y08416|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096080|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096081|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096082|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096083|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##NM_000750|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##U48861|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC098443|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC006114|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_000743|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_001166694|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AF385584|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##Y08418|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006646|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006897|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##M37981|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC000513|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC001642|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC002996|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##U62432|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AK095823|MORF4L1|10933|mortality factor 4 like 1##AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_006791|MORF4L1|10933|mortality factor 4 like 1##NM_206839|MORF4L1|10933|mortality factor 4 like 1	0.086048	
chr8	143705538	143705627	reg1006983.p2	11.547	+	AF193421 D87468 BC075802 BC012321 NM_015193 TSC_hg19_v1_chr8_-_143695839	-9756	-	AB005297 NM_001702	-160206	+	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	-221045	-	TSC_hg19_v1_chr8_-_143751386 BC071862	45772	-	TSC_hg19_v1_chr8_-_143751397 AK127631 NM_001077527 NM_003724 BX640755	45819	-	NM_005672 AJ297436 AF043498 BC023582 BC048808 BC065183 CU692804 AY358912	56324	+	AF193421|ARC|23237|activity-regulated cytoskeleton-associated protein##D87468|ARC|23237|activity-regulated cytoskeleton-associated protein##BC075802|ARC|23237|activity-regulated cytoskeleton-associated protein##BC012321|ARC|23237|activity-regulated cytoskeleton-associated protein##NM_015193|ARC|23237|activity-regulated cytoskeleton-associated protein##AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##BC071862|JRK|8629|jerky homolog (mouse)##AK127631|JRK|8629|jerky homolog (mouse)##NM_001077527|JRK|8629|jerky homolog (mouse)##NM_003724|JRK|8629|jerky homolog (mouse)##BX640755|JRK|8629|jerky homolog (mouse)##NM_005672|PSCA|8000|prostate stem cell antigen##AJ297436|PSCA|8000|prostate stem cell antigen##AF043498|PSCA|8000|prostate stem cell antigen##BC023582|PSCA|8000|prostate stem cell antigen##BC048808|PSCA|8000|prostate stem cell antigen##BC065183|PSCA|8000|prostate stem cell antigen##AY358912|PSCA|8000|prostate stem cell antigen	0.966722	CTCF.p2:-9:0.967
chrX	152933453	152933565	reg1008135.p1	11.547	+	TSC_hg19_v1_chrX_+_152912656 BC060837	-20769	+	TSC_hg19_v1_chrX_+_152908821 BC034936 BC042166	-24634	+	TSC_hg19_v1_chrX_+_152907894 AK314250 NM_001395 Y08302	-25570	+	AK303746 NM_001135740	5233	-	BC033746 AK296067 TSC_hg19_v1_chrX_-_152939308 BC064422	5819	-	AK309148 AK296203 NM_001039582 TSC_hg19_v1_chrX_-_152939817	6285	-	BC060837|DUSP9|1852|dual specificity phosphatase 9##BC034936|DUSP9|1852|dual specificity phosphatase 9##BC042166|DUSP9|1852|dual specificity phosphatase 9##AK314250|DUSP9|1852|dual specificity phosphatase 9##NM_001395|DUSP9|1852|dual specificity phosphatase 9##Y08302|DUSP9|1852|dual specificity phosphatase 9##AK303746|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##NM_001135740|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##BC033746|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK296067|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##BC064422|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK309148|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK296203|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##NM_001039582|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase	0.872533	CTCF.p2:0:0.873
chr12	56013509	56013676	reg1009466.p1	11.546	+	BC137000 BC137001 NM_001005494	-68596	+	NM_001005519	-127431	+	NM_001005499	-149671	-	BC136914 AB529283 NM_206899	17067	+	AK290112 NM_152637 TSC_hg19_v1_chr12_+_56075356	61751	+	BC020509 TSC_hg19_v1_chr12_+_56075425 AY358508	61847	+	BC137000|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##BC137001|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##NM_001005494|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68##NM_001005499|OR6C70|390327|olfactory receptor, family 6, subfamily C, member 70##BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1##NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1##AK290112|METTL7B|196410|methyltransferase like 7B##NM_152637|METTL7B|196410|methyltransferase like 7B##BC020509|METTL7B|196410|methyltransferase like 7B##AY358508|METTL7B|196410|methyltransferase like 7B	0.934405	CTCF.p2:-13:0.934
chr1	33560736	33560877	reg1008190.p2	11.546	+	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	-14073	+	TSC_hg19_v1_chr1_-_33502485 NM_001199199 NM_001625 NM_013411	-58306	-	AB005622 TSC_hg19_v1_chr1_-_33502470	-58331	-	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	86842	-	TSC_hg19_v1_chr1_+_33722167 NM_152493	161359	+	TSC_hg19_v1_chr1_-_33813262 AK055807	252490	-	BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##NM_001199199|AK2|204|adenylate kinase 2##NM_001625|AK2|204|adenylate kinase 2##NM_013411|AK2|204|adenylate kinase 2##AB005622|AK2|204|adenylate kinase 2##AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##NM_152493|ZNF362|149076|zinc finger protein 362	0.47962	CTCF.p2:-15:0.480
chr17	59494347	59494484	reg1010170.p1	11.546	+	BC046200 NM_203425	-5304	+	TSC_hg19_v1_chr17_+_59477713 AL832900 AB209378	-16698	+	TSC_hg19_v1_chr17_+_59477477 U28049	-16919	+	BC142620 TSC_hg19_v1_chr17_+_59529788	35371	+	AF188703 NM_018488 BC136403 BC144062 AB464284	39413	+	CU687600 BC062710 NM_199290 TSC_hg19_v1_chr17_-_59668583	174147	-	BC046200|C17orf82|388407|chromosome 17 open reading frame 82##NM_203425|C17orf82|388407|chromosome 17 open reading frame 82##AL832900|TBX2|6909|T-box 2##AB209378|TBX2|6909|T-box 2##U28049|TBX2|6909|T-box 2##BC142620|TBX4|9496|T-box 4##AF188703|TBX4|9496|T-box 4##NM_018488|TBX4|9496|T-box 4##BC136403|TBX4|9496|T-box 4##BC144062|TBX4|9496|T-box 4##BC062710|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##NM_199290|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2	0.39038	CTCF.p2:-4:0.373
chr3	14832948	14833072	reg1009225.p1	11.546	+	NM_001184957 NM_001184958 NM_032137 AK131481 BC030599 AL834386 AL136781 BC038406	-116365	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	-139727	+	TSC_hg19_v1_chr3_+_14693268 NM_016474 AK091158 AX746816 BC005199 BC033897 BC013999	-139752	+	NM_152536	27458	+	TSC_hg19_v1_chr3_-_14988966 BC014104 BC063441 BC039246	155946	-	TSC_hg19_v1_chr3_-_14989000 AK055924	156027	-	NM_001184957|C3orf20|84077|chromosome 3 open reading frame 20##NM_001184958|C3orf20|84077|chromosome 3 open reading frame 20##NM_032137|C3orf20|84077|chromosome 3 open reading frame 20##AK131481|C3orf20|84077|chromosome 3 open reading frame 20##BC030599|C3orf20|84077|chromosome 3 open reading frame 20##AL834386|C3orf20|84077|chromosome 3 open reading frame 20##AL136781|C3orf20|84077|chromosome 3 open reading frame 20##BC038406|C3orf20|84077|chromosome 3 open reading frame 20##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19##NM_016474|C3orf19|51244|chromosome 3 open reading frame 19##AK091158|C3orf19|51244|chromosome 3 open reading frame 19##BC005199|C3orf19|51244|chromosome 3 open reading frame 19##BC033897|C3orf19|51244|chromosome 3 open reading frame 19##BC013999|C3orf19|51244|chromosome 3 open reading frame 19##NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5##BC014104|LOC100505641|100505641|uncharacterized LOC100505641##BC063441|LOC100505641|100505641|uncharacterized LOC100505641##BC039246|LOC100505641|100505641|uncharacterized LOC100505641##AK055924|LOC100505641|100505641|uncharacterized LOC100505641	0.024181	
chr11	2021110	2021290	reg1008643.p4	11.545	+	TSC_hg19_v1_chr11_-_2019073 AK056774 AK092486 AK309887 AK311497	-2129	-	BC040073 TSC_hg19_v1_chr11_-_2019016	-2189	-	BC002550 TSC_hg19_v1_chr11_-_2018986 BC040852	-2260	-	TSC_hg19_v1_chr11_-_2152963 AF318382	131762	-	TSC_hg19_v1_chr11_-_2156727 AB528666 BT007013 CU674260 DQ892721 DQ895970	135536	-	S51971 TSC_hg19_v1_chr11_-_2158501	137304	-	AK056774|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AK092486|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC040073|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC002550|RPS12|6206|ribosomal protein S12##BC040852|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AF318382|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##BT007013|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ892721|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ895970|IGF2|3481|insulin-like growth factor 2 (somatomedin A)	0.0	
chr1	38537678	38537799	reg1007520.p1	11.545	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-25289	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-59308	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-59353	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	787648	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	801278	-	AK312811 BC051675 AK123051 NM_030772	809539	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.542287	CTCF.p2:-8:0.542
chr13	91669721	91669833	reg1009269.p1	11.545	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3344908	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5296338	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7213277	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	381127	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	2209650	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3462049	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.922099	CTCF.p2:9:0.922
chr17	63227964	63228079	reg1009087.p1	11.544	+	TSC_hg19_v1_chr17_+_63133501 AK309061 AK290535 BC022504 AK301719 AF071476 AK289876 AF493933 AY585191	-94442	+	NM_001081955 NM_001165933 NM_003835 TSC_hg19_v1_chr17_+_63133479	-94551	+	TSC_hg19_v1_chr17_-_63052903 AK301699 NM_006572	-175120	-	BC006295 TSC_hg19_v1_chr17_-_63556453	328454	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	329658	-	CR933657 TSC_hg19_v1_chr17_-_63557767	329747	-	AK309061|RGS9|8787|regulator of G-protein signaling 9##AK290535|RGS9|8787|regulator of G-protein signaling 9##BC022504|RGS9|8787|regulator of G-protein signaling 9##AK301719|RGS9|8787|regulator of G-protein signaling 9##AF071476|RGS9|8787|regulator of G-protein signaling 9##AK289876|RGS9|8787|regulator of G-protein signaling 9##AF493933|RGS9|8787|regulator of G-protein signaling 9##AY585191|RGS9|8787|regulator of G-protein signaling 9##NM_001081955|RGS9|8787|regulator of G-protein signaling 9##NM_001165933|RGS9|8787|regulator of G-protein signaling 9##NM_003835|RGS9|8787|regulator of G-protein signaling 9##AK301699|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_006572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC006295|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##CR933657|AXIN2|8313|axin 2	0.525623	CTCF.p2:-2:0.526
chr8	24245280	24245385	reg1007690.p2	11.544	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	-3425	+	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	-93725	+	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	-533021	-	BC058037 AK292492 NM_003817 AF215824 CU691292 AB527100	53199	+	TSC_hg19_v1_chr8_+_24771273 AK296226 BC071752 EF560736 NM_005382	525939	+	EF560737 TSC_hg19_v1_chr8_+_24771276 BC096757 GQ129242 GQ129243 AB527839	525959	+	NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1##BC058037|ADAM7|8756|ADAM metallopeptidase domain 7##AK292492|ADAM7|8756|ADAM metallopeptidase domain 7##NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7##AF215824|ADAM7|8756|ADAM metallopeptidase domain 7##AK296226|NEFM|4741|neurofilament, medium polypeptide##BC071752|NEFM|4741|neurofilament, medium polypeptide##EF560736|NEFM|4741|neurofilament, medium polypeptide##NM_005382|NEFM|4741|neurofilament, medium polypeptide##EF560737|NEFM|4741|neurofilament, medium polypeptide##BC096757|NEFM|4741|neurofilament, medium polypeptide##GQ129242|NEFM|4741|neurofilament, medium polypeptide##GQ129243|NEFM|4741|neurofilament, medium polypeptide	0.972544	CTCF.p2:6:0.973
chr6	135203716	135203833	reg1007588.p2	11.542	+	TSC_hg19_v1_chr6_+_134758857 AK055166	-444926	+	AK055077 NM_001143676	-564579	-	TSC_hg19_v1_chr6_-_134498984 FM205708 AK293383 NM_001143677	-704782	-	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	67458	-	CU674720 EU831981 EU832074 TSC_hg19_v1_chr6_-_135375948 BC040849 AJ420551 BC001465	172114	-	TSC_hg19_v1_chr6_-_135375958 AK024258 AK295545 AF161394 U87791 AJ459826 AJ459827 NM_001145158 NM_001145207 NM_006620	172220	-	AK055166|LOC154092|154092|uncharacterized LOC154092##AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)##EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)##BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)##BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)##AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)##AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)##AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)##U87791|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)	0.162996	
chr17	1268858	1268992	reg1008205.p1	11.541	+	TSC_hg19_v1_chr17_-_1248347 L13388	-20569	-	AB090231 NM_172367 BC142615	-85961	+	NM_001164405	-95068	+	TSC_hg19_v1_chr17_-_1303504 BT007161 CU674076 EU176525 U28936 AB590347 BC000179 AX775995 U43399 U43430 U54778 U20972 BC001440 AY883089 AK295260 AK295997 AK296050 AK296555 AK128785 AK316185 AK316201	34544	-	TSC_hg19_v1_chr17_-_1303556 NM_006761	34628	-	BT007277 DQ891147 DQ894327 AB528363 TSC_hg19_v1_chr17_-_1359527 D10656 BC001718 BC009837 AK291060 BC008506 NM_005206 NM_016823	90567	-	L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##AB090231|TUSC5|286753|tumor suppressor candidate 5##NM_172367|TUSC5|286753|tumor suppressor candidate 5##BC142615|TUSC5|286753|tumor suppressor candidate 5##NM_001164405|BHLHA9|727857|basic helix-loop-helix family, member a9##BT007161|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##EU176525|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U28936|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC000179|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43399|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43430|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U54778|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U20972|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC001440|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AY883089|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295260|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295997|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296050|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296555|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK128785|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316185|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316201|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##NM_006761|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BT007277|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##DQ891147|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##DQ894327|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##D10656|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC001718|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC009837|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##AK291060|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC008506|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_005206|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_016823|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)	0.971023	CTCF.p2:-21:0.971
chrX	15991567	15991695	reg1007165.p1	11.541	+	TSC_hg19_v1_chrX_-_15873104 NM_003916	-118528	-	AK130075 TSC_hg19_v1_chrX_-_15872938	-118693	-	TSC_hg19_v1_chrX_-_15872937 AK296135 AK299921 AK312594	-118702	-	NM_005314	149792	+	L13220 NM_004057 X65869 BC112174	676666	+	AK125332 NM_001144002	738708	-	NM_003916|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##NM_005314|GRPR|2925|gastrin-releasing peptide receptor##L13220|S100G|795|S100 calcium binding protein G##NM_004057|S100G|795|S100 calcium binding protein G##X65869|S100G|795|S100 calcium binding protein G##BC112174|S100G|795|S100 calcium binding protein G##AK125332|CTPS2|56474|CTP synthase II##NM_001144002|CTPS2|56474|CTP synthase II	0.78192	CTCF.p2:51:0.740
chr2	68690566	68690688	reg1007612.p1	11.540	+	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	-98170	+	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	-98255	+	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	-143527	-	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	3783	-	TSC_hg19_v1_chr2_+_68694716 AK290841 NM_173545 AK308186 BC041144 CU691972	4137	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	182326	+	DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48##AK290841|APLF|200558|aprataxin and PNKP like factor##NM_173545|APLF|200558|aprataxin and PNKP like factor##AK308186|APLF|200558|aprataxin and PNKP like factor##BC041144|APLF|200558|aprataxin and PNKP like factor##AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1	0.521857	CTCF.p2:-15:0.522
chr3	156258960	156259104	reg1007766.p2	11.540	+	NM_172159 BC043166 AK127240	-250222	+	NM_003471 AK292999 L39833 U16953 U17968	-398170	+	NM_172160 L47665 AK292693 AK303287	-420681	+	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	13849	-	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	13911	-	NM_015508	133172	+	NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_003471|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292999|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L39833|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U16953|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U17968|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_172160|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L47665|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292693|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK303287|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	0.999656	CTCF.p2:-3:1.000
chr6	136929447	136929553	reg1007845.p2	11.540	+	NM_001198616 NM_001198617 NM_003980	-57544	-	TSC_hg19_v1_chr6_-_136871561 AJ242501 AJ242502 CU693064 AB384694 DQ890946 DQ896812 BC025777 AK312789 X73882	-57879	-	AK296483 AK311270 NM_001198614 NM_001198618 TSC_hg19_v1_chr6_-_136847745 AK311114 AK311236 AK316062 NM_001198619 AK311234	-81703	-	TSC_hg19_v1_chr6_-_137113169 AB384845	183730	-	TSC_hg19_v1_chr6_-_137113545 AK310942 D84476	184048	-	BC054503 TSC_hg19_v1_chr6_-_137113611	184110	-	NM_001198616|MAP7|9053|microtubule-associated protein 7##NM_001198617|MAP7|9053|microtubule-associated protein 7##NM_003980|MAP7|9053|microtubule-associated protein 7##AJ242501|MAP7|9053|microtubule-associated protein 7##AJ242502|MAP7|9053|microtubule-associated protein 7##DQ890946|MAP7|9053|microtubule-associated protein 7##DQ896812|MAP7|9053|microtubule-associated protein 7##BC025777|MAP7|9053|microtubule-associated protein 7##AK312789|MAP7|9053|microtubule-associated protein 7##X73882|MAP7|9053|microtubule-associated protein 7##AK296483|MAP7|9053|microtubule-associated protein 7##AK311270|MAP7|9053|microtubule-associated protein 7##NM_001198614|MAP7|9053|microtubule-associated protein 7##NM_001198618|MAP7|9053|microtubule-associated protein 7##AK311114|MAP7|9053|microtubule-associated protein 7##AK311236|MAP7|9053|microtubule-associated protein 7##AK316062|MAP7|9053|microtubule-associated protein 7##NM_001198619|MAP7|9053|microtubule-associated protein 7##AK311234|MAP7|9053|microtubule-associated protein 7##AK310942|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##D84476|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##BC054503|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5	0.888123	CTCF.p2:4:0.888
chr11	82578655	82578792	reg1009185.p1	11.539	+	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	-133825	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-3426999	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-4292828	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	32794	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	34051	+	AK312323 TSC_hg19_v1_chr11_-_82782872	204150	-	BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82##AK312323|RAB30|27314|RAB30, member RAS oncogene family	0.997018	CTCF.p2:-5:0.997
chr1	207152857	207152987	reg1009927.p1	11.539	+	AK298394 NM_001122979 NM_001170631 NM_032029	-8966	-	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	-33161	-	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	-57635	-	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	53126	-	TSC_hg19_v1_chr1_-_207224335 AL833081 BC137166 BC137167 NM_018566	71437	-	AK292883 TSC_hg19_v1_chr1_+_207226619 NM_001018053 NM_006212 AJ005578 AF470623 AB044805 BC112103 BC112105 BC069350 BC069385 BC069583 BC069586 BC069600 BC075075 BC075076	73715	+	AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116##AL833081|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137166|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137167|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##NM_018566|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##AK292883|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_001018053|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_006212|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AJ005578|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AF470623|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AB044805|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112103|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112105|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069350|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069385|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069583|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069586|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069600|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075075|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075076|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	0.356019	CTCF.p2:7:0.356
chr12	106099592	106099690	reg1006065.p1	11.539	+	AJ311378 TSC_hg19_v1_chr12_+_105724640	-375002	+	TSC_hg19_v1_chr12_+_105724468 BC013920 NM_001145199 BC067897 BC045812 BC061920 AK056999 AJ311377	-375170	+	CU689714 AB527678 DQ892107 DQ895301 TSC_hg19_v1_chr12_-_105629989 AK001521 AK290562 AK297100 BC033731 BC028008 AY113704 NM_001251904 NM_018171	-469731	-	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	433041	-	AB011109 BC152462 NM_014840	434169	-	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	542206	-	AJ311378|C12orf75|387882|chromosome 12 open reading frame 75##BC013920|C12orf75|387882|chromosome 12 open reading frame 75##NM_001145199|C12orf75|387882|chromosome 12 open reading frame 75##BC067897|C12orf75|387882|chromosome 12 open reading frame 75##BC045812|C12orf75|387882|chromosome 12 open reading frame 75##BC061920|C12orf75|387882|chromosome 12 open reading frame 75##AK056999|C12orf75|387882|chromosome 12 open reading frame 75##AJ311377|C12orf75|387882|chromosome 12 open reading frame 75##DQ892107|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##DQ895301|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK001521|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK290562|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK297100|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC033731|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC028008|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AY113704|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251904|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_018171|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4	0.120072	
chr19	10514914	10515050	reg1007500.p1	11.539	+	TSC_hg19_v1_chr19_-_10514250 NM_007065	-726	-	TSC_hg19_v1_chr19_-_10514219 BC000083 BC008793 U63131	-769	-	AB463478 AM393285 AM393349 BT006796 CR542249 DQ892174 DQ895369 U43077 TSC_hg19_v1_chr19_-_10514182	-813	-	AY593872 NM_001243121 TSC_hg19_v1_chr19_+_10527555	12521	+	TSC_hg19_v1_chr19_+_10531189 L20965 NM_001111307	16248	+	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	26445	+	NM_007065|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC000083|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC008793|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U63131|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AM393285|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AM393349|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BT006796|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##CR542249|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ892174|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ895369|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U43077|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AY593872|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001243121|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##L20965|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111307|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific	0.195043	
chr20	1946411	1946555	reg1009652.p1	11.539	+	TSC_hg19_v1_chr20_+_1876034 AK312521 BC033092 Y10375 AB385585 D86043 DQ891651	-70434	+	BC038510 NM_001040023 TSC_hg19_v1_chr20_+_1875923	-70609	+	TSC_hg19_v1_chr20_+_1875554 BC026692	-70887	+	AK289618 NM_001190892	26968	-	NM_001190900	27910	-	AK316076 BC026334 AK295512 TSC_hg19_v1_chr20_-_1974732 AK308747 NM_001190898 NM_001190899 NM_024411	28332	-	AK312521|SIRPA|140885|signal-regulatory protein alpha##BC033092|SIRPA|140885|signal-regulatory protein alpha##Y10375|SIRPA|140885|signal-regulatory protein alpha##D86043|SIRPA|140885|signal-regulatory protein alpha##DQ891651|SIRPA|140885|signal-regulatory protein alpha##BC038510|SIRPA|140885|signal-regulatory protein alpha##NM_001040023|SIRPA|140885|signal-regulatory protein alpha##BC026692|SIRPA|140885|signal-regulatory protein alpha##AK289618|PDYN|5173|prodynorphin##NM_001190892|PDYN|5173|prodynorphin##NM_001190900|PDYN|5173|prodynorphin##AK316076|PDYN|5173|prodynorphin##BC026334|PDYN|5173|prodynorphin##NM_001190898|PDYN|5173|prodynorphin##NM_001190899|PDYN|5173|prodynorphin##NM_024411|PDYN|5173|prodynorphin	1.472167	CTCF.p2:-6:0.994	CTCF.p2:52:0.478
chr2	89203405	89203533	reg1009458.p1	11.539	+	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	-18379	+	S49006 TSC_hg19_v1_chr2_-_89165772	-37757	-	BX648045 TSC_hg19_v1_chr2_+_89065391 AL137717 BC031698	-138068	+	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	88944	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	239120	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	309764	-	BX648045|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AL137717|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##BC031698|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##BC070336|IGKC|3514|immunoglobulin kappa constant	0.046419	
chr3	52462676	52462802	reg1008770.p1	11.539	+	AY014283 TSC_hg19_v1_chr3_+_52445005	-17757	+	TSC_hg19_v1_chr3_+_52444675 BC022002 AK292221	-18063	+	TSC_hg19_v1_chr3_+_52444661 NM_016483 NM_173341	-18148	+	AB029496 BC098104 BC098137 BC099724 NM_020163 TSC_hg19_v1_chr3_-_52479120	16358	-	CR541865 CR541885 DQ891026 DQ894206 AF020769 TSC_hg19_v1_chr3_-_52488058 BC030244 AK313743 NM_003280 X07897	25315	-	TSC_hg19_v1_chr3_+_52489516 NM_007184	26774	+	AY014283|PHF7|51533|PHD finger protein 7##BC022002|PHF7|51533|PHD finger protein 7##AK292221|PHF7|51533|PHD finger protein 7##NM_016483|PHF7|51533|PHD finger protein 7##NM_173341|PHF7|51533|PHD finger protein 7##AB029496|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##BC098104|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##BC098137|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##BC099724|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##NM_020163|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##CR541865|TNNC1|7134|troponin C type 1 (slow)##CR541885|TNNC1|7134|troponin C type 1 (slow)##DQ891026|TNNC1|7134|troponin C type 1 (slow)##DQ894206|TNNC1|7134|troponin C type 1 (slow)##AF020769|TNNC1|7134|troponin C type 1 (slow)##BC030244|TNNC1|7134|troponin C type 1 (slow)##AK313743|TNNC1|7134|troponin C type 1 (slow)##NM_003280|TNNC1|7134|troponin C type 1 (slow)##X07897|TNNC1|7134|troponin C type 1 (slow)##NM_007184|NISCH|11188|nischarin	0.988912	CTCF.p2:-10:0.989
chr12	8261536	8261652	reg1007162.p1	11.537	+	TSC_hg19_v1_chr12_+_8234872 NM_015509 AK074880 AK074858 AK074923 AK303675 AK314424 BC110876 AL050272 AK290537 BC002888	-26743	+	TSC_hg19_v1_chr12_-_8219032 U62027	-42578	-	TSC_hg19_v1_chr12_-_8218956 U28488 AK290242 AK312458 BC020742 NM_004054 AK223388	-42641	-	AF067800 NM_016184 NM_194447 NM_194448 NM_194450 AJ133532 AF328684 BC117439 BC117441 AF109146 BC074822 BC074874 AF200738 HQ258754 EU196761	14773	+	NM_001004328	63555	+	TSC_hg19_v1_chr12_+_8332811 AK096301 BC048994 AK311411 BC034777	71232	+	NM_015509|NECAP1|25977|NECAP endocytosis associated 1##AK074880|NECAP1|25977|NECAP endocytosis associated 1##AK074858|NECAP1|25977|NECAP endocytosis associated 1##AK074923|NECAP1|25977|NECAP endocytosis associated 1##AK303675|NECAP1|25977|NECAP endocytosis associated 1##AK314424|NECAP1|25977|NECAP endocytosis associated 1##BC110876|NECAP1|25977|NECAP endocytosis associated 1##AL050272|NECAP1|25977|NECAP endocytosis associated 1##AK290537|NECAP1|25977|NECAP endocytosis associated 1##BC002888|NECAP1|25977|NECAP endocytosis associated 1##U62027|C3AR1|719|complement component 3a receptor 1##U28488|C3AR1|719|complement component 3a receptor 1##AK290242|C3AR1|719|complement component 3a receptor 1##AK312458|C3AR1|719|complement component 3a receptor 1##BC020742|C3AR1|719|complement component 3a receptor 1##NM_004054|C3AR1|719|complement component 3a receptor 1##AK223388|C3AR1|719|complement component 3a receptor 1##AF067800|CLEC4A|50856|C-type lectin domain family 4, member A##NM_016184|CLEC4A|50856|C-type lectin domain family 4, member A##NM_194447|CLEC4A|50856|C-type lectin domain family 4, member A##NM_194448|CLEC4A|50856|C-type lectin domain family 4, member A##NM_194450|CLEC4A|50856|C-type lectin domain family 4, member A##AJ133532|CLEC4A|50856|C-type lectin domain family 4, member A##AF328684|CLEC4A|50856|C-type lectin domain family 4, member A##BC117439|CLEC4A|50856|C-type lectin domain family 4, member A##BC117441|CLEC4A|50856|C-type lectin domain family 4, member A##AF109146|CLEC4A|50856|C-type lectin domain family 4, member A##BC074822|CLEC4A|50856|C-type lectin domain family 4, member A##BC074874|CLEC4A|50856|C-type lectin domain family 4, member A##AF200738|CLEC4A|50856|C-type lectin domain family 4, member A##HQ258754|CLEC4A|50856|C-type lectin domain family 4, member A##NM_001004328|ZNF705A|440077|zinc finger protein 705A##AK096301|FAM66C|440078|family with sequence similarity 66, member C##BC048994|FAM66C|440078|family with sequence similarity 66, member C##BC034777|FAM66C|440078|family with sequence similarity 66, member C	0.99172	CTCF.p2:1:0.949
chr2	137142370	137142485	reg1008040.p2	11.537	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-266751	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-268629	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-399211	-	TSC_hg19_v1_chr2_+_137523114 AK299929	380689	+	NM_001080427	606034	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1579507	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.115839	
chr1	233530745	233530874	reg1006841.p1	11.536	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	-67226	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	-99326	-	TSC_hg19_v1_chr1_+_233086381 AF416713	-444420	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	219014	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	219110	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	509803	+	AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3	0.988972	CTCF.p2:-4:0.989
chr4	155903751	155903870	reg1009557.p1	11.536	+	NM_144979 AK302720 BC028588	-201348	+	TSC_hg19_v1_chr4_+_155665151 AY546085 AY546086 NM_004744 AF071510	-238594	+	TSC_hg19_v1_chr4_+_155665114 AK292598	-238692	+	NM_000910 U42766	225970	+	TSC_hg19_v1_chr4_-_156297959 BC022852	394145	-	TSC_hg19_v1_chr4_-_156297990 AK301075 BC146864 BC128540 BC128541 BC056683	394198	-	NM_144979|RBM46|166863|RNA binding motif protein 46##AK302720|RBM46|166863|RNA binding motif protein 46##BC028588|RBM46|166863|RNA binding motif protein 46##AY546085|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AY546086|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_004744|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AF071510|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AK292598|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_000910|NPY2R|4887|neuropeptide Y receptor Y2##U42766|NPY2R|4887|neuropeptide Y receptor Y2##BC022852|MAP9|79884|microtubule-associated protein 9##AK301075|MAP9|79884|microtubule-associated protein 9##BC146864|MAP9|79884|microtubule-associated protein 9##BC128540|MAP9|79884|microtubule-associated protein 9##BC128541|MAP9|79884|microtubule-associated protein 9##BC056683|MAP9|79884|microtubule-associated protein 9	0.997901	CTCF.p2:-4:0.998
chr4	73371072	73371183	reg1008747.p1	11.536	+	AK290937 NM_001144756 NM_053036 AF236083	-466257	+	AF119815 NM_004885 AK308069 AJ311393	-473558	+	AK223458 NM_001204306	-699891	-	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	63364	-	BC101684 BC143642 TSC_hg19_v1_chr4_-_73935431 AK096310 AY957564 AY957565 BC071812 NM_173827	564316	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	717652	-	AK290937|NPFFR2|10886|neuropeptide FF receptor 2##NM_001144756|NPFFR2|10886|neuropeptide FF receptor 2##NM_053036|NPFFR2|10886|neuropeptide FF receptor 2##AF236083|NPFFR2|10886|neuropeptide FF receptor 2##AF119815|NPFFR2|10886|neuropeptide FF receptor 2##NM_004885|NPFFR2|10886|neuropeptide FF receptor 2##AK308069|NPFFR2|10886|neuropeptide FF receptor 2##AJ311393|NPFFR2|10886|neuropeptide FF receptor 2##AK223458|GC|2638|group-specific component (vitamin D binding protein)##NM_001204306|GC|2638|group-specific component (vitamin D binding protein)##AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC101684|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC143642|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK096310|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957564|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957565|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC071812|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_173827|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17	0.412208	CTCF.p2:0:0.412
chr9	124308353	124308477	reg1009994.p1	11.536	+	AF378121 AF378122 AF378123 TSC_hg19_v1_chr9_-_124262101 BC045756	-46326	-	BC010703 TSC_hg19_v1_chr9_-_124132529 AK307999 AK304449 AK304518 AK302977 NM_004099 NM_198194	-175873	-	CR542100 X60067 AB528375 DQ891058 DQ894236 CU679799 TSC_hg19_v1_chr9_-_124132480 M81635	-175940	-	NM_032552	20983	+	TSC_hg19_v1_chr9_+_124461442 AF367051	153091	+	AY032952 NM_138709	196648	+	AF378121|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378122|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378123|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC045756|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC010703|STOM|2040|stomatin##AK307999|STOM|2040|stomatin##AK304449|STOM|2040|stomatin##AK304518|STOM|2040|stomatin##AK302977|STOM|2040|stomatin##NM_004099|STOM|2040|stomatin##NM_198194|STOM|2040|stomatin##CR542100|STOM|2040|stomatin##X60067|STOM|2040|stomatin##DQ891058|STOM|2040|stomatin##DQ894236|STOM|2040|stomatin##M81635|STOM|2040|stomatin##NM_032552|DAB2IP|153090|DAB2 interacting protein##AF367051|DAB2IP|153090|DAB2 interacting protein##AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein	0.064615	
chr13	49169915	49170036	reg1008248.p1	11.535	+	AK122778 TSC_hg19_v1_chr13_-_49110119	-59857	-	AB209543 TSC_hg19_v1_chr13_-_49107365	-62611	-	TSC_hg19_v1_chr13_-_49107313 AK315703 NM_001268	-62686	-	AB041947 AB038269 BC096832 BC069160 NM_020377 AB590816	110810	+	TSC_hg19_v1_chr13_+_49550058 AJ749706 NM_001079673 BX648706 BX648141 AK056071	380185	+	TSC_hg19_v1_chr13_+_49550791 BC051029	380746	+	AK122778|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AB209543|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK315703|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##NM_001268|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AB041947|CYSLTR2|57105|cysteinyl leukotriene receptor 2##AB038269|CYSLTR2|57105|cysteinyl leukotriene receptor 2##BC096832|CYSLTR2|57105|cysteinyl leukotriene receptor 2##BC069160|CYSLTR2|57105|cysteinyl leukotriene receptor 2##NM_020377|CYSLTR2|57105|cysteinyl leukotriene receptor 2##AJ749706|FNDC3A|22862|fibronectin type III domain containing 3A##NM_001079673|FNDC3A|22862|fibronectin type III domain containing 3A##BX648706|FNDC3A|22862|fibronectin type III domain containing 3A##BX648141|FNDC3A|22862|fibronectin type III domain containing 3A##AK056071|FNDC3A|22862|fibronectin type III domain containing 3A##BC051029|FNDC3A|22862|fibronectin type III domain containing 3A	0.948377	CTCF.p2:-26:0.923
chr20	46415345	46415508	reg1008068.p1	11.535	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-108	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-674	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-284742	+	AB037836 TSC_hg19_v1_chr20_-_47444291	1028860	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	1029013	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	1122892	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.582963	CTCF.p2:-7:0.583
chr10	57023812	57023933	reg1007076.p1	11.534	+	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	-462874	-	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-2492446	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-2949757	+	NM_001190478 TSC_hg19_v1_chr10_+_57358800	334902	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	1097142	-	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	1097154	-	AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor	0.981512	CTCF.p2:0:0.982
chr15	89207777	89207886	reg1008971.p1	11.534	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	-25645	+	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	-43261	+	BC109060 BC109061 BC073867 AK054603 BC064591 AB073887 NM_001144074 NM_017996	-117980	-	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	138855	+	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	230967	-	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	248729	-	BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein	0.0	
chr3	125853114	125853242	reg1004043.p1	11.534	+	NM_001164475 AK298070	-32784	-	BC028241 BC009444 TSC_hg19_v1_chr3_-_125802968 AK022780 AK000480 AK091671 AX747121 AK021925 BC009039 AK307107 NM_001008485 NM_001008486 NM_017836	-50137	-	AK093380 AX748089 NM_001008487	-77565	-	TSC_hg19_v1_chr3_-_125899364 AK307699 AK308112	46194	-	AF052732 BC027241 AK222535 AK222694 TSC_hg19_v1_chr3_-_125899430 AK294392 AK294530 AB209299 NM_012190	46265	-	TSC_hg19_v1_chr3_-_126076252 NM_014079 BC036733	223037	-	NM_001164475|SLC41A3|54946|solute carrier family 41, member 3##AK298070|SLC41A3|54946|solute carrier family 41, member 3##BC028241|SLC41A3|54946|solute carrier family 41, member 3##BC009444|SLC41A3|54946|solute carrier family 41, member 3##AK022780|SLC41A3|54946|solute carrier family 41, member 3##AK000480|SLC41A3|54946|solute carrier family 41, member 3##AK091671|SLC41A3|54946|solute carrier family 41, member 3##AK021925|SLC41A3|54946|solute carrier family 41, member 3##BC009039|SLC41A3|54946|solute carrier family 41, member 3##AK307107|SLC41A3|54946|solute carrier family 41, member 3##NM_001008485|SLC41A3|54946|solute carrier family 41, member 3##NM_001008486|SLC41A3|54946|solute carrier family 41, member 3##NM_017836|SLC41A3|54946|solute carrier family 41, member 3##AK093380|SLC41A3|54946|solute carrier family 41, member 3##NM_001008487|SLC41A3|54946|solute carrier family 41, member 3##AK307699|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK308112|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AF052732|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##BC027241|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222535|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222694|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294392|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294530|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AB209299|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##NM_012190|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##NM_014079|KLF15|28999|Kruppel-like factor 15##BC036733|KLF15|28999|Kruppel-like factor 15	0.999153	CTCF.p2:-5:0.999
chr13	47468328	47468453	reg1006256.p1	11.533	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	-97075	-	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-340883	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-340970	+	AK314132 BX647777 AK302787 NM_000621 NM_001165947	2677	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1107061	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	1143424	+	BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15	1.053057	CTCF.p2:-13:0.998
chr2	162443204	162443358	reg1007832.p2	11.533	+	AK057394 TSC_hg19_v1_chr2_-_162364248	-79028	-	TSC_hg19_v1_chr2_+_162272908 U49250 AB529217 HQ258587	-170375	+	TSC_hg19_v1_chr2_+_162272830 AK297438 AK312567 AK226050 BC029289	-170460	+	NM_001178015 NM_001178016 NM_022058 BC051190 AK294767 AK308529 AK309839 BC038298 AK293793 AB040457 BC136269 BC143714 AY376402	37655	+	AY429533 TSC_hg19_v1_chr2_-_162929965 AY429531 AY429532 BC013329 AB451339 AB451488 AB590646 M80536	486681	-	M74777 TSC_hg19_v1_chr2_-_162930507	487222	-	AK057394|AHCTF1P1|285116|AT hook containing transcription factor 1 pseudogene 1##U49250|TBR1|10716|T-box, brain, 1##HQ258587|TBR1|10716|T-box, brain, 1##AK297438|TBR1|10716|T-box, brain, 1##AK312567|TBR1|10716|T-box, brain, 1##AK226050|TBR1|10716|T-box, brain, 1##BC029289|TBR1|10716|T-box, brain, 1##NM_001178015|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##NM_001178016|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##NM_022058|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC051190|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK294767|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK308529|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK309839|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC038298|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK293793|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AB040457|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC136269|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC143714|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AY376402|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AY429533|DPP4|1803|dipeptidyl-peptidase 4##AY429531|DPP4|1803|dipeptidyl-peptidase 4##AY429532|DPP4|1803|dipeptidyl-peptidase 4##BC013329|DPP4|1803|dipeptidyl-peptidase 4##AB451339|DPP4|1803|dipeptidyl-peptidase 4##AB451488|DPP4|1803|dipeptidyl-peptidase 4##M80536|DPP4|1803|dipeptidyl-peptidase 4##M74777|DPP4|1803|dipeptidyl-peptidase 4	0.360491	CTCF.p2:-19:0.360
chr1	24194859	24194995	reg1009075.p1	11.532	+	CU675950 TSC_hg19_v1_chr1_-_24194781 M29877 AB074175 AK092914 AK095443 AK095455 AK225468 AK301302 AK310143 AK314649 AX747804 BC017338 AK295535 NM_000147	-118	-	TSC_hg19_v1_chr1_-_24151934 NM_000191 NM_001166059	-42979	-	TSC_hg19_v1_chr1_-_24151929 BC021145 BT009792 CR456884 CU679747 DQ892083 DQ895276 L07033 BC010570 AK309129 AK300733 AK313869	-43040	-	BC069722 NM_001841 X74328 FJ357036	44877	-	NM_017761 TSC_hg19_v1_chr1_+_24286310	91378	+	TSC_hg19_v1_chr1_+_24286317 AF151042 AK300522 BC068475 AK311305 BC001959 BC085018 BC078177 AF374386	91419	+	M29877|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AB074175|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK092914|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095443|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095455|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK225468|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK301302|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK310143|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK314649|FUCA1|2517|fucosidase, alpha-L- 1, tissue##BC017338|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK295535|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000147|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000191|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_001166059|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##BC021145|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##BT009792|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##CR456884|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##DQ892083|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##DQ895276|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##L07033|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##BC010570|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##AK309129|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##AK300733|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##AK313869|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)##NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)##X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)##NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2	0.966632	CTCF.p2:6:0.967
chr6	25788908	25789033	reg1007455.p1	11.532	+	AK024903 NM_005495 TSC_hg19_v1_chr6_+_25754969 AK293354	-34021	+	AK312055 AB590704 BC066238 BC066239 BC066240 BC066241 BC066242 BC066243 NM_170610	-61900	+	CU687518 BC062211 NM_170745	-62199	-	AK290783 AK308035 NM_005074	43307	-	BC017952 AK298297 AK298367 AK298271 NM_001098486 NM_006632	85484	-	U90544 NM_005835	141921	-	AK024903|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4##NM_005495|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4##AK293354|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4##AK312055|HIST1H2BA|255626|histone cluster 1, H2ba##BC066238|HIST1H2BA|255626|histone cluster 1, H2ba##BC066239|HIST1H2BA|255626|histone cluster 1, H2ba##BC066240|HIST1H2BA|255626|histone cluster 1, H2ba##BC066241|HIST1H2BA|255626|histone cluster 1, H2ba##BC066242|HIST1H2BA|255626|histone cluster 1, H2ba##BC066243|HIST1H2BA|255626|histone cluster 1, H2ba##NM_170610|HIST1H2BA|255626|histone cluster 1, H2ba##BC062211|HIST1H2AA|221613|histone cluster 1, H2aa##NM_170745|HIST1H2AA|221613|histone cluster 1, H2aa##AK290783|SLC17A1|6568|solute carrier family 17 (sodium phosphate), member 1##AK308035|SLC17A1|6568|solute carrier family 17 (sodium phosphate), member 1##NM_005074|SLC17A1|6568|solute carrier family 17 (sodium phosphate), member 1##BC017952|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##AK298297|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##AK298367|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##AK298271|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##NM_001098486|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##NM_006632|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##U90544|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2##NM_005835|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2	0.96406	CTCF.p2:-7:0.964
chr1	156450638	156450752	reg1007142.p1	11.531	+	NM_006365 U49857 BC059943 BC107686 BC050448 TSC_hg19_v1_chr1_-_156399219 AK095626 BC054045	-51419	-	AF193807 AK290840 AK294641 AK303799 AK303814 AY139092 AY139093 NM_020407 AK308556 TSC_hg19_v1_chr1_+_156339022 AK054780 BC065218	-111674	+	TSC_hg19_v1_chr1_-_156308103 NM_001008800 NM_005998	-142543	-	BC040949 TSC_hg19_v1_chr1_-_156460409	9708	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	19823	-	TSC_hg19_v1_chr1_-_156470563 BC018985 BC032479 AB210005 BC064988	19855	-	NM_006365|C1orf61|10485|chromosome 1 open reading frame 61##U49857|C1orf61|10485|chromosome 1 open reading frame 61##BC059943|C1orf61|10485|chromosome 1 open reading frame 61##BC107686|C1orf61|10485|chromosome 1 open reading frame 61##BC050448|C1orf61|10485|chromosome 1 open reading frame 61##AK095626|C1orf61|10485|chromosome 1 open reading frame 61##BC054045|C1orf61|10485|chromosome 1 open reading frame 61##AF193807|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK290840|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK294641|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303799|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303814|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139092|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139093|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_020407|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK308556|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK054780|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##BC065218|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_001008800|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_005998|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##BC040949|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D##BC018985|MEF2D|4209|myocyte enhancer factor 2D##BC032479|MEF2D|4209|myocyte enhancer factor 2D##AB210005|MEF2D|4209|myocyte enhancer factor 2D	2.043936	CTCF.p2:-7:0.943	CTCF.p2:90:0.839	CTCF.p2:-105:0.262
chr3	133931877	133932001	reg1009681.p1	11.531	+	BC051347 TSC_hg19_v1_chr3_-_133748836 NM_005630	-183066	-	U70867 BC041140 AK303550 AK309561 TSC_hg19_v1_chr3_-_133748770	-183189	-	AK025826 AK225383 BC051274 BC064502 BC082257 NM_025041	-283353	-	TSC_hg19_v1_chr3_-_133969397 AB527382	37525	-	TSC_hg19_v1_chr3_-_133969650 NM_001005861 NM_002958 X69970 X96588	37687	-	TSC_hg19_v1_chr3_-_134093290 AK223598 AK001343 AB023206 AK291616 NM_016201	161426	-	BC051347|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##NM_005630|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##U70867|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##BC041140|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK303550|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK309561|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK025826|C3orf36|80111|chromosome 3 open reading frame 36##AK225383|C3orf36|80111|chromosome 3 open reading frame 36##BC051274|C3orf36|80111|chromosome 3 open reading frame 36##BC064502|C3orf36|80111|chromosome 3 open reading frame 36##BC082257|C3orf36|80111|chromosome 3 open reading frame 36##NM_025041|C3orf36|80111|chromosome 3 open reading frame 36##NM_001005861|RYK|6259|RYK receptor-like tyrosine kinase##NM_002958|RYK|6259|RYK receptor-like tyrosine kinase##X69970|RYK|6259|RYK receptor-like tyrosine kinase##X96588|RYK|6259|RYK receptor-like tyrosine kinase##AK223598|AMOTL2|51421|angiomotin like 2##AK001343|AMOTL2|51421|angiomotin like 2##AB023206|AMOTL2|51421|angiomotin like 2##AK291616|AMOTL2|51421|angiomotin like 2##NM_016201|AMOTL2|51421|angiomotin like 2	0.998663	CTCF.p2:-6:0.999
chr5	172759128	172759244	reg1007573.p2	11.531	+	AK095891 NM_003714	-2681	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	-3743	-	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	-3924	-	BC003114 TSC_hg19_v1_chr5_-_173043602	284411	-	TSC_hg19_v1_chr5_-_173043624 AK301982	284442	-	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	284487	-	AK095891|STC2|8614|stanniocalcin 2##NM_003714|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1	0.925304	CTCF.p2:9:0.407	CTCF.p2:-23:0.518
chr2	191895385	191895508	reg1007370.p1	11.530	+	TSC_hg19_v1_chr2_-_191878927 AK225853 NM_007315 NM_139266	-16495	-	TSC_hg19_v1_chr2_-_191878916 AK096686	-16532	-	TSC_hg19_v1_chr2_-_191878883 AK315002 BC002704	-16552	-	AK299976 TSC_hg19_v1_chr2_-_192015721	120267	-	TSC_hg19_v1_chr2_-_192015734 AK300868 BC016694	120290	-	L78440 TSC_hg19_v1_chr2_-_192015772 AK301172	120323	-	AK225853|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##NM_007315|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##NM_139266|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##AK096686|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##AK315002|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##BC002704|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##AK299976|STAT4|6775|signal transducer and activator of transcription 4##AK300868|STAT4|6775|signal transducer and activator of transcription 4##BC016694|STAT4|6775|signal transducer and activator of transcription 4##L78440|STAT4|6775|signal transducer and activator of transcription 4##AK301172|STAT4|6775|signal transducer and activator of transcription 4	0.978587	CTCF.p2:9:0.979
chr12	8696968	8697092	reg1007693.p1	11.529	+	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	-3556	-	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	-30799	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	-88428	+	AB040431 BC006296 NM_020661	68409	-	TSC_hg19_v1_chr12_-_8815272 AK315807 BC005901 AK290585 AK299475	118266	-	TSC_hg19_v1_chr12_-_8815423 U37283 NM_003480	118371	-	BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##AB040431|AICDA|57379|activation-induced cytidine deaminase##BC006296|AICDA|57379|activation-induced cytidine deaminase##NM_020661|AICDA|57379|activation-induced cytidine deaminase##AK315807|MFAP5|8076|microfibrillar associated protein 5##BC005901|MFAP5|8076|microfibrillar associated protein 5##AK290585|MFAP5|8076|microfibrillar associated protein 5##AK299475|MFAP5|8076|microfibrillar associated protein 5##U37283|MFAP5|8076|microfibrillar associated protein 5##NM_003480|MFAP5|8076|microfibrillar associated protein 5	0.999654	CTCF.p2:-15:1.000
chr2	41641697	41641826	reg1009635.p1	11.528	+	Y12878 Y12885 AK291696 BX537482 NM_001112802	-902189	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	-962539	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-984330	-	AK124893 NM_001242815	539181	-	TSC_hg19_v1_chr2_+_42275160 NM_138370	633371	+	AB528999 TSC_hg19_v1_chr2_+_42275979	634200	+	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)	0.93601	CTCF.p2:-6:0.936
chrX	15779857	15779983	reg1009661.p1	11.528	+	AB021660 AK291050 NM_007220	-23519	+	BC014317 NM_020665	-96767	-	AK315144 NM_021804 AB193259	-159686	-	BC113454 BC113480 NM_005089 TSC_hg19_v1_chrX_+_15808594 D49677 BC050451 BC065719 AK309673 HQ258575	28679	+	TSC_hg19_v1_chrX_-_15872876 AF251295	92956	-	TSC_hg19_v1_chrX_-_15872883 BC001117 BC071867	92966	-	AB021660|CA5B|11238|carbonic anhydrase VB, mitochondrial##AK291050|CA5B|11238|carbonic anhydrase VB, mitochondrial##NM_007220|CA5B|11238|carbonic anhydrase VB, mitochondrial##BC014317|TMEM27|57393|transmembrane protein 27##NM_020665|TMEM27|57393|transmembrane protein 27##AK315144|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##NM_021804|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##AB193259|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##BC113454|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC113480|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##NM_005089|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##D49677|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC050451|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC065719|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AK309673|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##HQ258575|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	0.975868	CTCF.p2:-14:0.976
chr1	1185675	1185809	reg1009714.p1	11.527	+	BC089443 NM_001014980	-3641	-	TSC_hg19_v1_chr1_+_1167622 NM_080605 BC051719	-18065	+	TSC_hg19_v1_chr1_-_1167426 NM_016176 NM_016547	-18309	-	BC104890 BC113430 BC143657 TSC_hg19_v1_chr1_-_1209214 AF296658 AK075017 AK291935	23395	-	TSC_hg19_v1_chr1_-_1209229 BC094777 NM_058167 NM_194315 NM_194457 NM_194458	23488	-	TSC_hg19_v1_chr1_+_1209415 DQ898177	23658	+	BC089443|FAM132A|388581|family with sequence similarity 132, member A##NM_001014980|FAM132A|388581|family with sequence similarity 132, member A##NM_080605|B3GALT6|126792|UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6##BC051719|B3GALT6|126792|UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6##NM_016176|SDF4|51150|stromal cell derived factor 4##NM_016547|SDF4|51150|stromal cell derived factor 4##BC104890|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##BC113430|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##BC143657|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##AF296658|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##AK075017|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##AK291935|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##BC094777|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_058167|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194315|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194457|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194458|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2	0.830069	CTCF.p2:11:0.830
chr12	21833452	21833553	reg1007189.p1	11.527	+	TSC_hg19_v1_chr12_-_21810792 NM_002300	-22707	-	TSC_hg19_v1_chr12_-_21810774 AK312328 BC015122	-22729	-	TSC_hg19_v1_chr12_-_21810756 BC002362 AY189689	-22742	-	BC000544 AK291821 D50312 NM_004982	94178	-	NM_005691 NM_020297	256125	-	AK056519 TSC_hg19_v1_chr12_-_22094251 BC033804	260748	-	NM_002300|LDHB|3945|lactate dehydrogenase B##AK312328|LDHB|3945|lactate dehydrogenase B##BC015122|LDHB|3945|lactate dehydrogenase B##BC002362|LDHB|3945|lactate dehydrogenase B##AY189689|LDHB|3945|lactate dehydrogenase B##BC000544|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##AK291821|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##D50312|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##NM_004982|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##NM_005691|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##NM_020297|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##AK056519|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##BC033804|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	0.999476	CTCF.p2:-14:0.999
chr16	11501453	11501583	reg1007477.p1	11.527	+	TSC_hg19_v1_chr16_+_11439315 BC013040	-62200	+	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	-62224	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-126376	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	178669	-	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	179271	-	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	260780	+	BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin	0.991275	CTCF.p2:-9:0.991
chr1	180832432	180832569	reg1007657.p2	11.525	+	AF099082 TSC_hg19_v1_chr1_+_180601194 AF115389 CU691970	-231223	+	TSC_hg19_v1_chr1_+_180601171 BC041142 AF089744	-231332	+	AK309750 TSC_hg19_v1_chr1_+_180601157	-231341	+	NM_020950 AB046834	49818	+	TSC_hg19_v1_chr1_+_180897572 BC000118	65081	+	BC009944 TSC_hg19_v1_chr1_-_180992009 AK299063 AK312440	159510	-	AF099082|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF115389|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##BC041142|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF089744|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AK309750|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_020950|KIAA1614|57710|KIAA1614##AB046834|KIAA1614|57710|KIAA1614##BC009944|STX6|10228|syntaxin 6##AK299063|STX6|10228|syntaxin 6##AK312440|STX6|10228|syntaxin 6	0.976475	CTCF.p2:11:0.839
chr4	141805728	141805851	reg1009323.p1	11.525	+	NM_015130 TSC_hg19_v1_chr4_-_141677529	-128290	-	U28480 BC069556 BC096736 BC098168 BC098258 BC098352 NM_021833	-315869	-	TSC_hg19_v1_chr4_+_141445351 BX648843 BC015168 AK093087	-360434	+	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	248742	-	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	336266	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	336297	+	NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)##U28480|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC069556|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC096736|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098168|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098258|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098352|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##NM_021833|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BX648843|ELMOD2|255520|ELMO/CED-12 domain containing 2##BC015168|ELMOD2|255520|ELMO/CED-12 domain containing 2##AK093087|ELMOD2|255520|ELMO/CED-12 domain containing 2##AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330	0.641411	CTCF.p2:1:0.641
chr4	4254611	4254719	reg1006308.p1	11.525	+	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	-4717	-	BC130430 BC130432 NM_177998	-26048	-	BC044637 TSC_hg19_v1_chr4_-_3957162	-297510	-	TSC_hg19_v1_chr4_-_4291782 AL136750 NM_001145725	37102	-	TSC_hg19_v1_chr4_-_4291848 AK000432 BC015796 AK290750	37185	-	TSC_hg19_v1_chr4_-_4291900 NM_017816	37247	-	BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##AL136750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_001145725|LYAR|55646|Ly1 antibody reactive homolog (mouse)##AK000432|LYAR|55646|Ly1 antibody reactive homolog (mouse)##BC015796|LYAR|55646|Ly1 antibody reactive homolog (mouse)##AK290750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_017816|LYAR|55646|Ly1 antibody reactive homolog (mouse)	0.996825	CTCF.p2:-31:0.997
chr11	7570263	7570380	reg1007404.p2	11.524	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	-35078	+	NM_003621 BC021714 TSC_hg19_v1_chr11_+_7535171	-35218	+	NM_198474 BX647908 BC092488 TSC_hg19_v1_chr11_+_7506763 AK298137 BC035895 AK297778	-63604	+	AK296718 TSC_hg19_v1_chr11_+_7618421	48097	+	AB209000 BC001346 AF169802 NM_016229	124431	-	NM_198185	157619	-	AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##NM_003621|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##BC021714|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##NM_198474|OLFML1|283298|olfactomedin-like 1##BX647908|OLFML1|283298|olfactomedin-like 1##BC092488|OLFML1|283298|olfactomedin-like 1##AK298137|OLFML1|283298|olfactomedin-like 1##BC035895|OLFML1|283298|olfactomedin-like 1##AK297778|OLFML1|283298|olfactomedin-like 1##AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AB209000|CYB5R2|51700|cytochrome b5 reductase 2##BC001346|CYB5R2|51700|cytochrome b5 reductase 2##AF169802|CYB5R2|51700|cytochrome b5 reductase 2##NM_016229|CYB5R2|51700|cytochrome b5 reductase 2##NM_198185|OVCH2|341277|ovochymase 2 (gene/pseudogene)	0.0	
chr14	102780623	102780753	reg1009101.p1	11.524	+	TSC_hg19_v1_chr14_-_102771492 AK094747 BC053536 BC026069 AK302349 AK312778 AB022694 NM_014226	-9189	-	TSC_hg19_v1_chr14_+_102606250 NM_001242414 NM_001242415 NM_001242416 NM_001242417 NM_001242418 NM_144574 NM_181291 NM_181308 BC030654 AK090580 AK225852 BC028387 AK090978 AX746714 AK297727 AL832242 AL832500 CU688486 DQ891530 DQ894719 EU831767 EU831845 AF327354 BX248274	-174478	+	TSC_hg19_v1_chr14_-_102606024 BX248761 AJ890082 AK056446 NM_001017963	-174649	-	AK093342 AX748064 TSC_hg19_v1_chr14_+_102783841	3089	+	TSC_hg19_v1_chr14_+_102786095 BX248266 NM_018335	5406	+	NM_001177611 AF228148 TSC_hg19_v1_chr14_-_102829228 AF228149 BC000600 AK056112 NM_001177612 NM_032630	48464	-	AK094747|MOK|5891|MOK protein kinase##BC053536|MOK|5891|MOK protein kinase##BC026069|MOK|5891|MOK protein kinase##AK302349|MOK|5891|MOK protein kinase##AK312778|MOK|5891|MOK protein kinase##AB022694|MOK|5891|MOK protein kinase##NM_014226|MOK|5891|MOK protein kinase##NM_001242414|WDR20|91833|WD repeat domain 20##NM_001242415|WDR20|91833|WD repeat domain 20##NM_001242416|WDR20|91833|WD repeat domain 20##NM_001242417|WDR20|91833|WD repeat domain 20##NM_001242418|WDR20|91833|WD repeat domain 20##NM_144574|WDR20|91833|WD repeat domain 20##NM_181291|WDR20|91833|WD repeat domain 20##NM_181308|WDR20|91833|WD repeat domain 20##BC030654|WDR20|91833|WD repeat domain 20##AK090580|WDR20|91833|WD repeat domain 20##AK225852|WDR20|91833|WD repeat domain 20##BC028387|WDR20|91833|WD repeat domain 20##AK090978|WDR20|91833|WD repeat domain 20##AK297727|WDR20|91833|WD repeat domain 20##AL832242|WDR20|91833|WD repeat domain 20##AL832500|WDR20|91833|WD repeat domain 20##DQ891530|WDR20|91833|WD repeat domain 20##DQ894719|WDR20|91833|WD repeat domain 20##EU831767|WDR20|91833|WD repeat domain 20##EU831845|WDR20|91833|WD repeat domain 20##AF327354|WDR20|91833|WD repeat domain 20##BX248274|WDR20|91833|WD repeat domain 20##BX248761|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AJ890082|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK056446|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##NM_001017963|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK093342|ZNF839|55778|zinc finger protein 839##BX248266|ZNF839|55778|zinc finger protein 839##NM_018335|ZNF839|55778|zinc finger protein 839##NM_001177611|CINP|51550|cyclin-dependent kinase 2 interacting protein##AF228148|CINP|51550|cyclin-dependent kinase 2 interacting protein##AF228149|CINP|51550|cyclin-dependent kinase 2 interacting protein##BC000600|CINP|51550|cyclin-dependent kinase 2 interacting protein##AK056112|CINP|51550|cyclin-dependent kinase 2 interacting protein##NM_001177612|CINP|51550|cyclin-dependent kinase 2 interacting protein##NM_032630|CINP|51550|cyclin-dependent kinase 2 interacting protein	0.92501	CTCF.p2:19:0.925
chr9	130526520	130526638	reg1006824.p1	11.524	+	AK311510 NM_001142532 AK294386 NM_001142531	-1872	-	AK291393 TSC_hg19_v1_chr9_-_130517562 NM_001142534 AK056068 NM_001142533	-9012	-	TSC_hg19_v1_chr9_-_130497669 NM_001085347 NM_001134430 NM_001134431 NM_001252018 NM_001252021 NM_001252023 NM_130459	-28919	-	CU693348 BC027962 AY358440 AF124251 AK292041 BX647905 NM_001252334 NM_005489	6999	-	BC032365 AK292718 AK096983 AK128287 NM_170600	14400	-	NM_001261 TSC_hg19_v1_chr9_+_130548312	21729	+	AK311510|SH2D3C|10044|SH2 domain containing 3C##NM_001142532|SH2D3C|10044|SH2 domain containing 3C##AK294386|SH2D3C|10044|SH2 domain containing 3C##NM_001142531|SH2D3C|10044|SH2 domain containing 3C##AK291393|SH2D3C|10044|SH2 domain containing 3C##NM_001142534|SH2D3C|10044|SH2 domain containing 3C##AK056068|SH2D3C|10044|SH2 domain containing 3C##NM_001142533|SH2D3C|10044|SH2 domain containing 3C##NM_001085347|TOR2A|27433|torsin family 2, member A##NM_001134430|TOR2A|27433|torsin family 2, member A##NM_001134431|TOR2A|27433|torsin family 2, member A##NM_001252018|TOR2A|27433|torsin family 2, member A##NM_001252021|TOR2A|27433|torsin family 2, member A##NM_001252023|TOR2A|27433|torsin family 2, member A##NM_130459|TOR2A|27433|torsin family 2, member A##BC027962|SH2D3C|10044|SH2 domain containing 3C##AY358440|SH2D3C|10044|SH2 domain containing 3C##AF124251|SH2D3C|10044|SH2 domain containing 3C##AK292041|SH2D3C|10044|SH2 domain containing 3C##BX647905|SH2D3C|10044|SH2 domain containing 3C##NM_001252334|SH2D3C|10044|SH2 domain containing 3C##NM_005489|SH2D3C|10044|SH2 domain containing 3C##BC032365|SH2D3C|10044|SH2 domain containing 3C##AK292718|SH2D3C|10044|SH2 domain containing 3C##AK096983|SH2D3C|10044|SH2 domain containing 3C##AK128287|SH2D3C|10044|SH2 domain containing 3C##NM_170600|SH2D3C|10044|SH2 domain containing 3C##NM_001261|CDK9|1025|cyclin-dependent kinase 9	0.014098	
chr2	714410	714533	reg1006791.p1	11.523	+	TSC_hg19_v1_chr2_-_677406 BC016010 AL137269 NM_152834	-37060	-	BC033490 NM_001002919	-426227	-	TSC_hg19_v1_chr2_+_264946 NM_001040649 NM_004300 NM_007099 AK289934 M83653 BC020699 AK291861 BC007422 AB209838 BC106011 AB385551 BT007136 Y16846 M83654 M87546 S62885	-449559	+	TSC_hg19_v1_chr2_+_946534 BC035783 NM_018968 AJ003029 BC125251	232108	+	BC063107 NM_000547 NM_001206744 NM_001206745 NM_175719 BC095448 M17755 J02969 J02970 X17358 Y00406	702784	+	NM_175721 NM_175722 AF439430 CU687644	703708	+	BC016010|TMEM18|129787|transmembrane protein 18##AL137269|TMEM18|129787|transmembrane protein 18##NM_152834|TMEM18|129787|transmembrane protein 18##BC033490|FAM150B|285016|family with sequence similarity 150, member B##NM_001002919|FAM150B|285016|family with sequence similarity 150, member B##NM_001040649|ACP1|52|acid phosphatase 1, soluble##NM_004300|ACP1|52|acid phosphatase 1, soluble##NM_007099|ACP1|52|acid phosphatase 1, soluble##AK289934|ACP1|52|acid phosphatase 1, soluble##M83653|ACP1|52|acid phosphatase 1, soluble##BC020699|ACP1|52|acid phosphatase 1, soluble##AK291861|ACP1|52|acid phosphatase 1, soluble##BC007422|ACP1|52|acid phosphatase 1, soluble##AB209838|ACP1|52|acid phosphatase 1, soluble##BC106011|ACP1|52|acid phosphatase 1, soluble##BT007136|ACP1|52|acid phosphatase 1, soluble##Y16846|ACP1|52|acid phosphatase 1, soluble##M83654|ACP1|52|acid phosphatase 1, soluble##M87546|ACP1|52|acid phosphatase 1, soluble##S62885|ACP1|52|acid phosphatase 1, soluble##BC035783|SNTG2|54221|syntrophin, gamma 2##NM_018968|SNTG2|54221|syntrophin, gamma 2##AJ003029|SNTG2|54221|syntrophin, gamma 2##BC125251|SNTG2|54221|syntrophin, gamma 2##BC063107|TPO|7173|thyroid peroxidase##NM_000547|TPO|7173|thyroid peroxidase##NM_001206744|TPO|7173|thyroid peroxidase##NM_001206745|TPO|7173|thyroid peroxidase##NM_175719|TPO|7173|thyroid peroxidase##BC095448|TPO|7173|thyroid peroxidase##M17755|TPO|7173|thyroid peroxidase##J02969|TPO|7173|thyroid peroxidase##J02970|TPO|7173|thyroid peroxidase##X17358|TPO|7173|thyroid peroxidase##Y00406|TPO|7173|thyroid peroxidase##NM_175721|TPO|7173|thyroid peroxidase##NM_175722|TPO|7173|thyroid peroxidase##AF439430|TPO|7173|thyroid peroxidase	0.954641	CTCF.p2:-1:0.955
chr14	40458310	40458422	reg1008252.p1	11.522	+	BC053537 BC068566 BC030611 NM_203301	-556705	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-557009	-	TSC_hg19_v1_chr14_+_39736592 BC039017 AK315254 BC029513 BC051363 U73682	-721793	+	NM_152447 AK096627	1618401	+	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	4518109	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	4908132	+	BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##BC039017|CTAGE5|4253|CTAGE family, member 5##AK315254|CTAGE5|4253|CTAGE family, member 5##BC029513|CTAGE5|4253|CTAGE family, member 5##BC051363|CTAGE5|4253|CTAGE family, member 5##U73682|CTAGE5|4253|CTAGE family, member 5##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28	0.988726	CTCF.p2:-16:0.989
chr19	6166126	6166243	reg1008009.p2	11.521	+	AY009107 BC022027 AK093433 AX748123 AK302604 AJ577571 NM_030924 BC090046 AL136854	-30431	+	TSC_hg19_v1_chr19_-_6110613 BC028579 AK303321 NM_000635 NM_134433	-55572	-	TSC_hg19_v1_chr19_-_6110512 AK291196 BC071571 X76091	-55661	-	TSC_hg19_v1_chr19_-_6199558 AK056073	33363	-	AB463904 TSC_hg19_v1_chr19_-_6279803	113619	-	TSC_hg19_v1_chr19_-_6279967 D14539 NM_005934	113781	-	AY009107|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC022027|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK093433|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK302604|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AJ577571|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##NM_030924|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC090046|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AL136854|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC028579|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK303321|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_000635|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_134433|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK291196|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC071571|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##X76091|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##D14539|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1##NM_005934|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1	0.943446	CTCF.p2:-10:0.943
chr15	82932841	82932954	reg1010296.p1	11.520	+	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	-108004	-	NM_198181 CR936812	-210681	+	TSC_hg19_v1_chr15_+_82647308 BC066934	-285566	+	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	11895	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	11993	+	CR936602 NM_001164465	85281	-	BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10	0.799612	CTCF.p2:2:0.800
chr1	11724173	11724309	reg1009252.p2	11.519	+	TSC_hg19_v1_chr1_+_11724261 AK314989 NM_018438 AF129536 BC020880	-34	+	TSC_hg19_v1_chr1_+_11714940 NM_001014765 NM_033182 NM_183413 CR749368 AK296025 AK301418 AK316284 AK316347 AY040878 AK293721 BC007832 AK294053	-9320	+	AF187318 NM_012168	-9429	-	TSC_hg19_v1_chr1_-_11741180 AK027327 AF139365 AF157482 NM_006341	16981	-	NM_001127325 AK094316	27450	-	BC111064 NM_198545 AK075558 TSC_hg19_v1_chr1_+_11751786 AY358750	27562	+	AK314989|FBXO6|26270|F-box protein 6##NM_018438|FBXO6|26270|F-box protein 6##AF129536|FBXO6|26270|F-box protein 6##BC020880|FBXO6|26270|F-box protein 6##NM_001014765|FBXO44|93611|F-box protein 44##NM_033182|FBXO44|93611|F-box protein 44##NM_183413|FBXO44|93611|F-box protein 44##CR749368|FBXO44|93611|F-box protein 44##AK296025|FBXO44|93611|F-box protein 44##AK301418|FBXO44|93611|F-box protein 44##AK316284|FBXO44|93611|F-box protein 44##AK316347|FBXO44|93611|F-box protein 44##AY040878|FBXO44|93611|F-box protein 44##AK293721|FBXO44|93611|F-box protein 44##BC007832|FBXO44|93611|F-box protein 44##AK294053|FBXO44|93611|F-box protein 44##AF187318|FBXO2|26232|F-box protein 2##NM_012168|FBXO2|26232|F-box protein 2##AK027327|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##AF139365|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##AF157482|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##NM_006341|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##NM_001127325|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##AK094316|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##BC111064|C1orf187|374946|chromosome 1 open reading frame 187##NM_198545|C1orf187|374946|chromosome 1 open reading frame 187##AK075558|C1orf187|374946|chromosome 1 open reading frame 187##AY358750|C1orf187|374946|chromosome 1 open reading frame 187	0.134059	
chr1	158173759	158173940	reg1008339.p1	11.519	+	AK225996 TSC_hg19_v1_chr1_+_158150684 AK310541 J04142 AK310749 AB590619 CU693322	-23065	+	BC027926 NM_001766	-24113	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	-210461	+	M28825 NM_001763	50077	+	AK226024 NM_001765	85711	+	CU686844 AB590508 AK303330 BC074747 AK310617 BC069481 BC104216 BC104217 M28826 NM_001764	127416	-	AK225996|CD1D|912|CD1d molecule##J04142|CD1D|912|CD1d molecule##AK310749|CD1D|912|CD1d molecule##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule##BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##M28825|CD1A|909|CD1a molecule##NM_001763|CD1A|909|CD1a molecule##AK226024|CD1C|911|CD1c molecule##NM_001765|CD1C|911|CD1c molecule##AK303330|CD1B|910|CD1b molecule##BC074747|CD1B|910|CD1b molecule##AK310617|CD1B|910|CD1b molecule##BC069481|CD1B|910|CD1b molecule##BC104216|CD1B|910|CD1b molecule##BC104217|CD1B|910|CD1b molecule##M28826|CD1B|910|CD1b molecule##NM_001764|CD1B|910|CD1b molecule	0.999435	CTCF.p2:-51:0.999
chr4	26412415	26412567	reg1009169.p1	11.519	+	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	-89809	+	TSC_hg19_v1_chr4_+_26322635 AK302230	-89855	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	-90182	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	79494	-	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	173189	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	450049	+	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2	0.923523	CTCF.p2:25:0.781
chr5	92943646	92943778	reg1010120.p1	11.519	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	-23044	+	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	-24729	+	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	-26749	-	AK309742 TSC_hg19_v1_chr5_-_92957232	13499	-	CU688688 EU446850 BC029532 AB527965 AK098546 NM_153216	133540	-	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	503608	-	BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##EU446850|POU5F2|134187|POU domain class 5, transcription factor 2##BC029532|POU5F2|134187|POU domain class 5, transcription factor 2##AK098546|POU5F2|134187|POU domain class 5, transcription factor 2##NM_153216|POU5F2|134187|POU domain class 5, transcription factor 2##AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A	0.0	
chr21	40890365	40890494	reg1007930.p1	11.518	+	NM_007341 X93498 BC006371 BT006994 GQ129448 GQ129449	-66623	+	TSC_hg19_v1_chr21_+_40817797 NM_001001713	-72634	+	BC043006 BC026122 TSC_hg19_v1_chr21_-_40817675	-72759	-	AB020337 NM_006057 NM_033170 NM_033171 NM_033172 NM_033173	138824	+	AK092516 AX747579 NM_001080444 AB528819	226955	+	NM_006198 U52969 AK289964 BC013791 X93349 AF416716 AM183336	348948	+	NM_007341|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##X93498|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##BC006371|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##BT006994|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##GQ129448|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##GQ129449|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##NM_001001713|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##BC043006|LCA5L|150082|Leber congenital amaurosis 5-like##BC026122|LCA5L|150082|Leber congenital amaurosis 5-like##AB020337|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_006057|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033170|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033171|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033172|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033173|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##AK092516|IGSF5|150084|immunoglobulin superfamily, member 5##NM_001080444|IGSF5|150084|immunoglobulin superfamily, member 5##NM_006198|PCP4|5121|Purkinje cell protein 4##U52969|PCP4|5121|Purkinje cell protein 4##AK289964|PCP4|5121|Purkinje cell protein 4##BC013791|PCP4|5121|Purkinje cell protein 4##X93349|PCP4|5121|Purkinje cell protein 4##AF416716|PCP4|5121|Purkinje cell protein 4##AM183336|PCP4|5121|Purkinje cell protein 4	0.976078	CTCF.p2:-15:0.881
chr7	8335819	8335944	reg1009094.p1	11.518	+	TSC_hg19_v1_chr7_-_8302174 U38260 L01100 BC008640 BC005922 NM_004968	-33708	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	-34090	-	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	-34165	-	TSC_hg19_v1_chr7_+_8473238 AK095624	137357	+	AB047362 AB073665 NM_152745 TSC_hg19_v1_chr7_+_8473633	137729	+	AK315141 TSC_hg19_v1_chr7_+_8474016 AK091655 BC047505 AK296248	138239	+	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa##L01100|ICA1|3382|islet cell autoantigen 1, 69kDa##BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa##BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##AK095624|NXPH1|30010|neurexophilin 1##AB047362|NXPH1|30010|neurexophilin 1##AB073665|NXPH1|30010|neurexophilin 1##NM_152745|NXPH1|30010|neurexophilin 1##AK315141|NXPH1|30010|neurexophilin 1##AK091655|NXPH1|30010|neurexophilin 1##BC047505|NXPH1|30010|neurexophilin 1##AK296248|NXPH1|30010|neurexophilin 1	0.991667	CTCF.p2:7:0.992
chr11	44545189	44545296	reg1007742.p1	11.517	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-213566	-	NM_000401 BX648142	-427483	+	BC068545 TSC_hg19_v1_chr11_+_44117272 U72263 BC013050	-427971	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	41923	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	41985	+	NM_130783	240733	+	AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_000401|EXT2|2132|exostosin 2##BX648142|EXT2|2132|exostosin 2##BC068545|EXT2|2132|exostosin 2##U72263|EXT2|2132|exostosin 2##BC013050|EXT2|2132|exostosin 2##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_130783|TSPAN18|90139|tetraspanin 18	0.730956	CTCF.p2:-3:0.731
chr16	11450647	11450775	reg1008489.p1	11.517	+	TSC_hg19_v1_chr16_+_11439315 BC013040	-11393	+	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	-11417	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-75569	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	229476	-	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	230078	-	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	311587	+	BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin	0.921211	CTCF.p2:18:0.921
chr5	35926660	35926780	reg1006897.p1	11.517	+	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	-69687	+	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	-308711	+	NM_000949	-695898	-	NM_001042625 BC017586 NM_144647	12088	-	CU686633 BC068446 AK308046 AK290809 AK057066 AK303770 AK315851 AK296136 NM_152404	64718	-	BC035012 NM_001171873	74407	-	BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##NM_000949|PRLR|5618|prolactin receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like##BC068446|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK308046|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK290809|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK057066|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK303770|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK315851|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK296136|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_152404|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	0.948754	CTCF.p2:26:0.949
chr15	70805231	70805350	reg1007121.p2	11.516	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-415047	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-415063	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-463381	-	TSC_hg19_v1_chr15_-_70878946 BC040579	73654	-	BC016881 AL834243 NM_001008224 AK055435	189337	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	250552	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.012576	
chr19	48466572	48466677	reg1006426.p1	11.515	+	BC020755 TSC_hg19_v1_chr19_-_48389573 L02337 S43859 AK313415 AK289380 NM_003167	-77012	-	CU676700 DQ891165 DQ894346 U08024 L20000 X70222 TSC_hg19_v1_chr19_-_48389554 X84816 U08025	-77086	-	NM_000554 DQ426868 BC016664 DQ426867 BC053672	-141469	+	AB590993 DQ227497 NM_001128326	28758	-	AF279147 NM_022142 BC015598	31301	+	HQ258076 BC126133 BC126135 AF169159 NM_019855	80621	-	BC020755|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L02337|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##S43859|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##AK313415|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##AK289380|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##NM_003167|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ891165|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ894346|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08024|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L20000|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X70222|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X84816|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08025|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##NM_000554|CRX|1406|cone-rod homeobox##DQ426868|CRX|1406|cone-rod homeobox##BC016664|CRX|1406|cone-rod homeobox##DQ426867|CRX|1406|cone-rod homeobox##BC053672|CRX|1406|cone-rod homeobox##DQ227497|BSPH1|100131137|binder of sperm protein homolog 1##NM_001128326|BSPH1|100131137|binder of sperm protein homolog 1##AF279147|ELSPBP1|64100|epididymal sperm binding protein 1##NM_022142|ELSPBP1|64100|epididymal sperm binding protein 1##BC015598|ELSPBP1|64100|epididymal sperm binding protein 1##HQ258076|CABP5|56344|calcium binding protein 5##BC126133|CABP5|56344|calcium binding protein 5##BC126135|CABP5|56344|calcium binding protein 5##AF169159|CABP5|56344|calcium binding protein 5##NM_019855|CABP5|56344|calcium binding protein 5	0.976184	CTCF.p2:-25:0.976
chr4	170969029	170969159	reg1009051.p1	11.515	+	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-21589	-	BC066912 AF327560 AK308263 NM_001009554	-44172	-	AB528091 AM392880 TSC_hg19_v1_chr4_-_170679066 AK000541 AL136673 BC010367 NM_017867	-290022	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	42104	-	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	42320	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	1765550	+	AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##BC066912|MFAP3L|9848|microfibrillar-associated protein 3-like##AF327560|MFAP3L|9848|microfibrillar-associated protein 3-like##AK308263|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001009554|MFAP3L|9848|microfibrillar-associated protein 3-like##AM392880|C4orf27|54969|chromosome 4 open reading frame 27##AK000541|C4orf27|54969|chromosome 4 open reading frame 27##AL136673|C4orf27|54969|chromosome 4 open reading frame 27##BC010367|C4orf27|54969|chromosome 4 open reading frame 27##NM_017867|C4orf27|54969|chromosome 4 open reading frame 27##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	0.963202	CTCF.p2:14:0.963
chr11	122893944	122894070	reg1007837.p2	11.514	+	AB231738 NM_001098169	-41651	-	AK097534 BC068507 NM_024806 NM_199124	-140576	+	BC070266 AK313578 AF001622 NM_019604	-184778	+	AB034951 BC016179 BC016660 BC019816 AF352832 TSC_hg19_v1_chr11_-_122932842 AK222628 AK222785 AK096100 AK129885 AK303935	38817	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	38872	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	171895	-	AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AB034951|HSPA8|3312|heat shock 70kDa protein 8##BC016179|HSPA8|3312|heat shock 70kDa protein 8##BC016660|HSPA8|3312|heat shock 70kDa protein 8##BC019816|HSPA8|3312|heat shock 70kDa protein 8##AF352832|HSPA8|3312|heat shock 70kDa protein 8##AK222628|HSPA8|3312|heat shock 70kDa protein 8##AK222785|HSPA8|3312|heat shock 70kDa protein 8##AK096100|HSPA8|3312|heat shock 70kDa protein 8##AK129885|HSPA8|3312|heat shock 70kDa protein 8##AK303935|HSPA8|3312|heat shock 70kDa protein 8##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein	0.999311	CTCF.p2:7:0.999
chr10	45353315	45353439	reg1008129.p1	11.513	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	-472878	-	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-1209071	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-1209172	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	53341	+	AK056518 TSC_hg19_v1_chr10_-_45455156	101770	-	TSC_hg19_v1_chr10_+_45455249 AY216713 AY216714 AY216715 AY216716 NM_032023 BC032593 AF260335 AK311531	101855	+	CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)##AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4	0.362162	CTCF.p2:10:0.362
chr11	87132504	87132640	reg1009829.p1	11.513	+	AK024853 TSC_hg19_v1_chr11_+_87032449	-100130	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	-383594	+	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	-466184	-	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	776020	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	938295	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	938330	-	AK024853|TMEM135|65084|transmembrane protein 135##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C	0.955709	CTCF.p2:11:0.956
chr7	140711996	140712139	reg1010449.p1	11.513	+	TSC_hg19_v1_chr7_-_140624512 AB529216 AK314346 BC101757 BC112079 M95712 NM_004333	-87560	-	TSC_hg19_v1_chr7_+_140396507 AF067166 NM_004546 AF050639 BC063026 BC001168 CR542121	-315564	+	TSC_hg19_v1_chr7_+_140372910 AF131745 AY302592 NM_052853 BC014107	-339129	+	AF151897 AK024776 NM_016071	2400	-	TSC_hg19_v1_chr7_-_140714748 AF078858 BC105793	2683	-	NM_053035 TSC_hg19_v1_chr7_-_140714792	2719	-	AK314346|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC101757|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC112079|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##M95712|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##NM_004333|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##AF067166|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##NM_004546|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF050639|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC063026|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC001168|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##CR542121|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF131745|ADCK2|90956|aarF domain containing kinase 2##AY302592|ADCK2|90956|aarF domain containing kinase 2##NM_052853|ADCK2|90956|aarF domain containing kinase 2##BC014107|ADCK2|90956|aarF domain containing kinase 2##AF151897|MRPS33|51650|mitochondrial ribosomal protein S33##AK024776|MRPS33|51650|mitochondrial ribosomal protein S33##NM_016071|MRPS33|51650|mitochondrial ribosomal protein S33##AF078858|MRPS33|51650|mitochondrial ribosomal protein S33##BC105793|MRPS33|51650|mitochondrial ribosomal protein S33##NM_053035|MRPS33|51650|mitochondrial ribosomal protein S33	0.810618	CTCF.p2:8:0.691
chr11	59570151	59570296	reg1009551.p1	11.512	+	TSC_hg19_v1_chr11_+_59522917 AK312909 AK297419 AK290251 U32315 CU675647 HQ447354 AB464272 AJ002076 BT006666	-47232	+	TSC_hg19_v1_chr11_+_59522849 AK293494 BC007405 BC007429	-47376	+	AK125660 NM_001178040 NM_004177	-47692	+	CR457117 CU674518 TSC_hg19_v1_chr11_-_59578247 BC001040 BC019269 AB049642 AK000491 AF183428 NM_017840	8014	-	CU691524 DQ892469 DQ895682 AK301290 AK301295 X76562 BC037958 NM_005142 AK314275	42735	-	DQ892807 DQ896054 AK292990 BC018632 J05068 NM_001062	63768	-	AK312909|STX3|6809|syntaxin 3##AK297419|STX3|6809|syntaxin 3##AK290251|STX3|6809|syntaxin 3##U32315|STX3|6809|syntaxin 3##HQ447354|STX3|6809|syntaxin 3##AJ002076|STX3|6809|syntaxin 3##BT006666|STX3|6809|syntaxin 3##AK293494|STX3|6809|syntaxin 3##BC007405|STX3|6809|syntaxin 3##BC007429|STX3|6809|syntaxin 3##AK125660|STX3|6809|syntaxin 3##NM_001178040|STX3|6809|syntaxin 3##NM_004177|STX3|6809|syntaxin 3##CR457117|MRPL16|54948|mitochondrial ribosomal protein L16##BC001040|MRPL16|54948|mitochondrial ribosomal protein L16##BC019269|MRPL16|54948|mitochondrial ribosomal protein L16##AB049642|MRPL16|54948|mitochondrial ribosomal protein L16##AK000491|MRPL16|54948|mitochondrial ribosomal protein L16##AF183428|MRPL16|54948|mitochondrial ribosomal protein L16##NM_017840|MRPL16|54948|mitochondrial ribosomal protein L16##DQ892469|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##DQ895682|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##AK301290|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##AK301295|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##X76562|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##BC037958|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##NM_005142|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##AK314275|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##DQ892807|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##DQ896054|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##AK292990|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##BC018632|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##J05068|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##NM_001062|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)	0.960099	CTCF.p2:4:0.960
chr4	17449456	17449561	reg1007397.p2	11.512	+	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	-549123	-	AK226029 TSC_hg19_v1_chr4_-_16900258	-549249	-	AK300119 AB463834 DQ891981 DQ895171 AK312881 TSC_hg19_v1_chr4_-_16900210 AF068651 AF047337 AF064492 AF064493 BC034019	-549382	-	AB528218 AM393718 DQ891926 DQ895113 CU674280 TSC_hg19_v1_chr4_-_17513714 X04882 BC000576 AK124382 AK296622 AK223437 AK289773 NM_000320	64258	-	BC127863 NM_001079827	67279	+	TSC_hg19_v1_chr4_+_17578852 NM_015907	129374	+	AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2##AK226029|LDB2|9079|LIM domain binding 2##AK300119|LDB2|9079|LIM domain binding 2##DQ891981|LDB2|9079|LIM domain binding 2##DQ895171|LDB2|9079|LIM domain binding 2##AK312881|LDB2|9079|LIM domain binding 2##AF068651|LDB2|9079|LIM domain binding 2##AF047337|LDB2|9079|LIM domain binding 2##AF064492|LDB2|9079|LIM domain binding 2##AF064493|LDB2|9079|LIM domain binding 2##BC034019|LDB2|9079|LIM domain binding 2##AM393718|QDPR|5860|quinoid dihydropteridine reductase##DQ891926|QDPR|5860|quinoid dihydropteridine reductase##DQ895113|QDPR|5860|quinoid dihydropteridine reductase##X04882|QDPR|5860|quinoid dihydropteridine reductase##BC000576|QDPR|5860|quinoid dihydropteridine reductase##AK124382|QDPR|5860|quinoid dihydropteridine reductase##AK296622|QDPR|5860|quinoid dihydropteridine reductase##AK223437|QDPR|5860|quinoid dihydropteridine reductase##AK289773|QDPR|5860|quinoid dihydropteridine reductase##NM_000320|QDPR|5860|quinoid dihydropteridine reductase##BC127863|CLRN2|645104|clarin 2##NM_001079827|CLRN2|645104|clarin 2##NM_015907|LAP3|51056|leucine aminopeptidase 3	0.996344	CTCF.p2:-2:0.996
chr5	142246714	142246819	reg1007726.p2	11.512	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-96458	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-96794	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-169195	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	536057	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	536340	-	BC015610 TSC_hg19_v1_chr5_-_142783214	536445	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.998958	CTCF.p2:4:0.999
chr12	62832044	62832168	reg1009529.p1	11.511	+	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	-177922	+	BC050347 NM_178539	-245523	-	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	-2748967	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	28473	+	BC042679 AB017814 AB384555 TSC_hg19_v1_chr12_+_62861012	28809	+	AK022671 TSC_hg19_v1_chr12_+_62954346	122205	+	NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)##AB017814|MON2|23041|MON2 homolog (S. cerevisiae)##AK022671|MON2|23041|MON2 homolog (S. cerevisiae)	0.999028	CTCF.p2:-7:0.999
chr5	25544886	25545008	reg1008062.p1	11.511	+	NM_006727	-899863	-	DQ388610 NM_020227 AK301776	-2037204	+	L33477 NM_004061	-2691217	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	1493724	-	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	1927456	+	NM_004932 TSC_hg19_v1_chr5_+_31193792 AK291290	5648849	+	NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401##NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	0.452385	CTCF.p2:-2:0.452
chr15	31782368	31782498	reg1009242.p1	11.510	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-163095	+	NM_001243538	-259384	-	GQ502181 HM135791 NM_001252020	-329005	-	AJ430383 NM_130901	165108	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	380396	-	TSC_hg19_v1_chr15_-_32162898 AK126002	380510	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.992139	CTCF.p2:-3:0.992
chr16	87584117	87584267	reg1010192.p1	11.510	+	AB011151 AB384500 NM_015144 AB030243 BC101478	-58802	-	TSC_hg19_v1_chr16_+_87425998 AF303888 AM393561 DQ893152 DQ896448 AB528176 AL834298	-158178	+	TSC_hg19_v1_chr16_+_87425947 AK025556 BC067797 BC018634	-158229	+	AB593088 TSC_hg19_v1_chr16_+_87636492 NM_020655 BC036533	52309	+	TSC_hg19_v1_chr16_+_87636574 AB042636	52386	+	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	52518	+	AB011151|ZCCHC14|23174|zinc finger, CCHC domain containing 14##NM_015144|ZCCHC14|23174|zinc finger, CCHC domain containing 14##AB030243|ZCCHC14|23174|zinc finger, CCHC domain containing 14##BC101478|ZCCHC14|23174|zinc finger, CCHC domain containing 14##AF303888|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AM393561|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ893152|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ896448|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AL834298|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK025556|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC067797|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC018634|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##NM_020655|JPH3|57338|junctophilin 3##BC036533|JPH3|57338|junctophilin 3##AB042636|JPH3|57338|junctophilin 3##DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3	0.992739	CTCF.p2:-13:0.993
chr4	180788572	180788701	reg1008159.p1	11.510	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-2424993	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-2425043	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-2425095	-	TSC_hg19_v1_chr4_+_183065111 AK308489	2276489	+	NM_001080477 HE578284 HE578285	2456518	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	3049894	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.920012	CTCF.p2:-15:0.920
chr12	110683434	110683552	reg1007705.p2	11.509	+	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	-121272	+	AK097461 NM_207435	-177994	-	TSC_hg19_v1_chr12_-_110486328 AK021447 BC041968	-197164	-	TSC_hg19_v1_chr12_+_110719041 NM_001681 NM_170665	35542	+	TSC_hg19_v1_chr12_+_110719528 M23114 BC035588 M23115 CU690124	35875	+	TSC_hg19_v1_chr12_-_110841470 BC098264 BC098295 BC098362 BC099732 BC111798 AF191340 BC148236 BC040130	157946	-	NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK097461|C12orf76|400073|chromosome 12 open reading frame 76##NM_207435|C12orf76|400073|chromosome 12 open reading frame 76##AK021447|C12orf76|400073|chromosome 12 open reading frame 76##BC041968|C12orf76|400073|chromosome 12 open reading frame 76##NM_001681|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_170665|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23114|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC035588|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23115|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC098264|ANAPC7|51434|anaphase promoting complex subunit 7##BC098295|ANAPC7|51434|anaphase promoting complex subunit 7##BC098362|ANAPC7|51434|anaphase promoting complex subunit 7##BC099732|ANAPC7|51434|anaphase promoting complex subunit 7##BC111798|ANAPC7|51434|anaphase promoting complex subunit 7##AF191340|ANAPC7|51434|anaphase promoting complex subunit 7##BC148236|ANAPC7|51434|anaphase promoting complex subunit 7##BC040130|ANAPC7|51434|anaphase promoting complex subunit 7	0.999596	CTCF.p2:0:1.000
chr12	15422001	15422119	reg1009026.p1	11.509	+	AK311016 BC007997 AK295343 AK313881 NM_001190726 NM_032918	-47710	-	NM_006205 DQ980604 D45399	-296094	+	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	-307512	-	NM_002848 NM_030667 TSC_hg19_v1_chr12_+_15475264 AB209729	53200	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	53491	+	NM_030668 NM_030669 NM_030670 NM_030671 AF152378 AF187042 AF187043 AF187044	277221	+	AK311016|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##BC007997|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK295343|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK313881|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_001190726|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_032918|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AB209729|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	1.010441	CTCF.p2:17:0.996
chr6	139087173	139087300	reg1008564.p1	11.509	+	TSC_hg19_v1_chr6_+_139013613 AK128874	-73623	+	TSC_hg19_v1_chr6_-_138893682 NM_020464	-193528	-	TSC_hg19_v1_chr6_-_138820580 AK092744 AX747703	-266620	-	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	7554	+	AK092592 AX747618 NM_001242740	7565	-	NM_001077706 NM_001195037	30011	+	AK128874|FLJ46906|441172|uncharacterized LOC441172##NM_020464|NHSL1|57224|NHS-like 1##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A##AK092592|LOC100507462|100507462|uncharacterized LOC100507462##NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462##NM_001077706|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##NM_001195037|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like	0.976365	CTCF.p2:-1:0.976
chr10	102321871	102322002	reg1008168.p2	11.508	+	TSC_hg19_v1_chr10_+_102295705 AF395830 BC007719 AB528628 DQ892767 DQ896013	-26178	+	TSC_hg19_v1_chr10_+_102295696 AK295353 NM_017902 AK000622	-26301	+	AF077028 AK293081 AK304277 TSC_hg19_v1_chr10_-_102289637 AF115968 AL080056 NM_005004 AK295867	-32300	-	TSC_hg19_v1_chr10_+_102505338 L25597 M89470 NM_000278 NM_003987 NM_003988 NM_003989 NM_003990	183466	+	AF460991 AF460992 NM_001136123 NM_001243770 NM_018121	350389	+	TSC_hg19_v1_chr10_+_102672719 AK292565 AL832343 AL833126 BC015131 BC047715 BC030565 BC064526 BC020915 BC073832 AL832383 AB385255	350839	+	AF395830|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##BC007719|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ892767|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ896013|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK295353|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##NM_017902|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK000622|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AF077028|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF115968|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AL080056|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##NM_005004|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##L25597|PAX2|5076|paired box 2##M89470|PAX2|5076|paired box 2##NM_000278|PAX2|5076|paired box 2##NM_003987|PAX2|5076|paired box 2##NM_003988|PAX2|5076|paired box 2##NM_003989|PAX2|5076|paired box 2##NM_003990|PAX2|5076|paired box 2##AF460991|FAM178A|55719|family with sequence similarity 178, member A##AF460992|FAM178A|55719|family with sequence similarity 178, member A##NM_001136123|FAM178A|55719|family with sequence similarity 178, member A##NM_001243770|FAM178A|55719|family with sequence similarity 178, member A##NM_018121|FAM178A|55719|family with sequence similarity 178, member A##AK292565|FAM178A|55719|family with sequence similarity 178, member A##AL832343|FAM178A|55719|family with sequence similarity 178, member A##AL833126|FAM178A|55719|family with sequence similarity 178, member A##BC015131|FAM178A|55719|family with sequence similarity 178, member A##BC047715|FAM178A|55719|family with sequence similarity 178, member A##BC030565|FAM178A|55719|family with sequence similarity 178, member A##BC064526|FAM178A|55719|family with sequence similarity 178, member A##BC020915|FAM178A|55719|family with sequence similarity 178, member A##BC073832|FAM178A|55719|family with sequence similarity 178, member A##AL832383|FAM178A|55719|family with sequence similarity 178, member A	0.0	
chr18	34268137	34268256	reg1008242.p2	11.508	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	-390482	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-500720	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-558308	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	140567	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	140698	-	AB073382 TSC_hg19_v1_chr18_-_34408948	140756	-	AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.208209	
chr19	34636786	34636907	reg1009044.p1	11.508	+	TSC_hg19_v1_chr19_+_34287743 NM_001129994 NM_001129995 NM_024076 AK027901 AK291465 BC001185 BC009335 AK225793 AK294543	-349110	+	BC018723 NM_022467	-461413	+	TSC_hg19_v1_chr19_+_34112858 NM_001127895 NM_001127896 BC014250 BC011380 AB047801	-523911	+	TSC_hg19_v1_chr19_+_34663327 BC016842 NM_001114093 NM_015578	26485	+	TSC_hg19_v1_chr19_+_34663429 AK300208	26580	+	TSC_hg19_v1_chr19_+_34663440 AL834398 AK027643 AB069974 AB069975	26622	+	NM_001129994|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_001129995|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_024076|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK027901|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK291465|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC001185|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC009335|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK225793|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK294543|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127895|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127896|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC014250|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC011380|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##AB047801|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC016842|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_001114093|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_015578|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK300208|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AL834398|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK027643|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069974|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069975|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)	0.999341	CTCF.p2:0:0.999
chr4	106392852	106392985	reg1009510.p1	11.508	+	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	-324874	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	-325107	+	BX640738 NM_017628	-325887	+	AM393754 AM393796 TSC_hg19_v1_chr4_-_106395220 AK294097 AL136655 AF161473 BC039462 BC008246 BC035569 BC012903 BC022803 AK289607 CU691190 AM393483 EU831414 EU831507 BC001065 BC021071 AB528841 AK297096 AK299125 AK299501 BC057219 AK000466 AB026722 AF217187 NM_006903 NM_176866 NM_176867 NM_176869	2272	-	AK000191 NM_001242729 NM_017700 BC105695	80864	+	TSC_hg19_v1_chr4_-_106629819 BC014442 AK314939 NM_001142471 NM_020395	236923	-	AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2##AM393754|PPA2|27068|pyrophosphatase (inorganic) 2##AM393796|PPA2|27068|pyrophosphatase (inorganic) 2##AK294097|PPA2|27068|pyrophosphatase (inorganic) 2##AL136655|PPA2|27068|pyrophosphatase (inorganic) 2##AF161473|PPA2|27068|pyrophosphatase (inorganic) 2##BC039462|PPA2|27068|pyrophosphatase (inorganic) 2##BC008246|PPA2|27068|pyrophosphatase (inorganic) 2##BC035569|PPA2|27068|pyrophosphatase (inorganic) 2##BC012903|PPA2|27068|pyrophosphatase (inorganic) 2##BC022803|PPA2|27068|pyrophosphatase (inorganic) 2##AK289607|PPA2|27068|pyrophosphatase (inorganic) 2##AM393483|PPA2|27068|pyrophosphatase (inorganic) 2##EU831414|PPA2|27068|pyrophosphatase (inorganic) 2##EU831507|PPA2|27068|pyrophosphatase (inorganic) 2##AK299125|PPA2|27068|pyrophosphatase (inorganic) 2##BC057219|PPA2|27068|pyrophosphatase (inorganic) 2##AK000466|PPA2|27068|pyrophosphatase (inorganic) 2##AB026722|PPA2|27068|pyrophosphatase (inorganic) 2##AF217187|PPA2|27068|pyrophosphatase (inorganic) 2##NM_006903|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176866|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176867|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176869|PPA2|27068|pyrophosphatase (inorganic) 2##AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_001242729|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC014442|INTS12|57117|integrator complex subunit 12##AK314939|INTS12|57117|integrator complex subunit 12##NM_001142471|INTS12|57117|integrator complex subunit 12##NM_020395|INTS12|57117|integrator complex subunit 12	0.937674	CTCF.p2:8:0.938
chr10	14239036	14239172	reg1008140.p1	11.507	+	TSC_hg19_v1_chr10_-_14050453 AK001072	-188612	-	TSC_hg19_v1_chr10_-_13749648 AK057828	-489415	-	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-610117	+	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	133746	-	TSC_hg19_v1_chr10_-_14646259 BC064407	407213	-	TSC_hg19_v1_chr10_-_14646423 BC072452	407325	-	AK001072|FRMD4A|55691|FERM domain containing 4A##AK057828|FRMD4A|55691|FERM domain containing 4A##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B	0.999367	CTCF.p2:-1:0.999
chr2	96658652	96658791	reg1007578.p1	11.506	+	TSC_hg19_v1_chr2_-_96657677 AK302433	-1099	-	TSC_hg19_v1_chr2_-_96482383 BC117383 BC126153 AK057596	-176276	-	BC015353 NM_138800	-400956	+	TSC_hg19_v1_chr2_+_96676311 BC015216	17603	+	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	41973	-	NM_000682 AB527942 BC133021 BC136537	123214	-	AK302433|ANKRD36C|400986|ankyrin repeat domain 36C##AK057596|LINC00342|150759|long intergenic non-protein coding RNA 342##BC015353|TRIM43|129868|tripartite motif containing 43##NM_138800|TRIM43|129868|tripartite motif containing 43##BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor	1.620937	CTCF.p2:-28:0.631	CTCF.p2:39:0.990
chr3	79135703	79135839	reg1010037.p1	11.506	+	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-67184	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-468786	-	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-2046491	+	NM_002941	681287	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	2674926	-	TSC_hg19_v1_chr3_-_81810798 AK312245	2675027	-	NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.978977	CTCF.p2:4:0.979
chr4	1750531	1750622	reg1006033.p2	11.506	+	TSC_hg19_v1_chr4_+_1723248 AK302463 AK225631 BC106071 AF093543 AF479620 AJ243997 BC111771	-27308	+	TSC_hg19_v1_chr4_+_1723215 NM_006342	-27359	+	TSC_hg19_v1_chr4_-_1722981 BC126370 BC009331 BC018921 NM_001127266 NM_138385	-27545	-	TSC_hg19_v1_chr4_+_1795019 AB209441 NM_000142 NM_001163213 NM_022965	44450	+	DQ893606 AK293572 TSC_hg19_v1_chr4_-_1857827 BC014500 BC021208 AF061025 NM_012318	107255	-	AK289697 TSC_hg19_v1_chr4_+_1873132 NM_001042424	122508	+	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3##NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC126370|TMEM129|92305|transmembrane protein 129##BC009331|TMEM129|92305|transmembrane protein 129##BC018921|TMEM129|92305|transmembrane protein 129##NM_001127266|TMEM129|92305|transmembrane protein 129##NM_138385|TMEM129|92305|transmembrane protein 129##AB209441|FGFR3|2261|fibroblast growth factor receptor 3##NM_000142|FGFR3|2261|fibroblast growth factor receptor 3##NM_001163213|FGFR3|2261|fibroblast growth factor receptor 3##NM_022965|FGFR3|2261|fibroblast growth factor receptor 3##DQ893606|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK293572|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC014500|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC021208|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AF061025|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##NM_012318|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK289697|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_001042424|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	1.008415	CTCF.p2:-15:0.997
chr6	62860116	62860216	reg1007840.p2	11.506	+	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	-4572487	-	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	-5677751	+	TSC_hg19_v1_chr6_-_57087081 AF161486 BC015021 NM_016277 CR749371 AK311123	-5773095	-	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	135835	-	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	1169698	-	TSC_hg19_v1_chr6_+_64231650 CR749458	1371489	+	BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AF161486|RAB23|51715|RAB23, member RAS oncogene family##BC015021|RAB23|51715|RAB23, member RAS oncogene family##NM_016277|RAB23|51715|RAB23, member RAS oncogene family##CR749371|RAB23|51715|RAB23, member RAS oncogene family##AK311123|RAB23|51715|RAB23, member RAS oncogene family##AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	0.940913	CTCF.p2:-5:0.941
chr11	128474049	128474179	reg1009783.p1	11.505	+	BX640634 NM_001143820	-16662	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	-81980	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	-82151	-	TSC_hg19_v1_chr11_+_128563793 NM_001167681 NM_002017	89684	+	TSC_hg19_v1_chr11_+_128563966 AK313370	89847	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	89866	+	BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001167681|FLI1|2313|Friend leukemia virus integration 1##NM_002017|FLI1|2313|Friend leukemia virus integration 1##AK313370|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1	0.537959	CTCF.p2:-6:0.538
chr7	102937766	102937886	reg1008762.p1	11.505	+	AK097711 BC094802 BC023575 TSC_hg19_v1_chr7_-_102920949	-16925	-	AL834175 BC150309 TSC_hg19_v1_chr7_-_102920725 AK302046 BC068601 BC033022 AK131353	-17118	-	AY357337 TSC_hg19_v1_chr7_-_102789708 CR936639 NM_001122838 NM_198990	-148259	-	TSC_hg19_v1_chr7_+_102937894 NM_004279 AK057656 AK000994 AK289864 BC010398 AF054182 AK098616 AK297354 AK309928 DQ892913 DQ896162	61	+	BC014079 TSC_hg19_v1_chr7_+_102937944	115	+	BC125057 BC139751 BC046351 X98260 TSC_hg19_v1_chr7_-_102985295 BC012376 BC062703 BC056682 BC032854 NM_001129887 NM_014377	47367	-	AK097711|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC094802|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC023575|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##AL834175|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC150309|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##AK302046|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC068601|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC033022|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##AK131353|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##AY357337|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D##CR936639|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D##NM_001122838|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D##NM_198990|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D##NM_004279|PMPCB|9512|peptidase (mitochondrial processing) beta##AK057656|PMPCB|9512|peptidase (mitochondrial processing) beta##AK000994|PMPCB|9512|peptidase (mitochondrial processing) beta##AK289864|PMPCB|9512|peptidase (mitochondrial processing) beta##BC010398|PMPCB|9512|peptidase (mitochondrial processing) beta##AF054182|PMPCB|9512|peptidase (mitochondrial processing) beta##AK098616|PMPCB|9512|peptidase (mitochondrial processing) beta##AK297354|PMPCB|9512|peptidase (mitochondrial processing) beta##AK309928|PMPCB|9512|peptidase (mitochondrial processing) beta##DQ892913|PMPCB|9512|peptidase (mitochondrial processing) beta##DQ896162|PMPCB|9512|peptidase (mitochondrial processing) beta##BC014079|PMPCB|9512|peptidase (mitochondrial processing) beta##BC125057|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC139751|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC046351|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##X98260|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC012376|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC062703|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC056682|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC032854|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_001129887|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_014377|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2	0.986129	CTCF.p2:-2:0.986
chr2	113482551	113482677	reg1004628.p2	11.504	+	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	-79094	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-140425	+	TSC_hg19_v1_chr2_+_113342023 AK024631 BC004498 NM_032309 AK312219	-140576	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	39608	-	NM_000575 BC035169	60358	-	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	111730	-	NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BC004498|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_032309|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK312219|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta	0.730492	CTCF.p2:11:0.730
chr13	100887619	100887756	reg1009992.p1	11.503	+	NM_000282 NM_001127692 NM_001178004 TSC_hg19_v1_chr13_+_100741349 AF385926 AK298318 AK225288 AK225299 AK296771 AK315503 BC000140 X14608	-146328	+	TSC_hg19_v1_chr13_+_100634271 AF104902 AF193855	-253400	+	TSC_hg19_v1_chr13_+_100634037 NM_007129	-253667	+	AK091974 BC001077 BC004360 NM_033110	298312	-	TSC_hg19_v1_chr13_-_101241029 AK095850 NM_001195087	353340	-	AK299859 TSC_hg19_v1_chr13_-_101327050 BX648008 AK056409 AK290345 BX647956	439369	-	NM_000282|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##NM_001127692|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##NM_001178004|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AF385926|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK298318|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK225288|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK225299|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK296771|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK315503|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##BC000140|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##X14608|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AF104902|ZIC2|7546|Zic family member 2##AF193855|ZIC2|7546|Zic family member 2##NM_007129|ZIC2|7546|Zic family member 2##AK091974|A2LD1|87769|AIG2-like domain 1##BC001077|A2LD1|87769|AIG2-like domain 1##BC004360|A2LD1|87769|AIG2-like domain 1##NM_033110|A2LD1|87769|AIG2-like domain 1##AK095850|A2LD1|87769|AIG2-like domain 1##NM_001195087|A2LD1|87769|AIG2-like domain 1##AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	0.292694	CTCF.p2:7:0.293
chr7	41744840	41744946	reg1007533.p1	11.503	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-2208	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1570284	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1570362	+	NM_000168	531724	-	TSC_hg19_v1_chr7_-_42276797 AK308429	531902	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	1206696	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.486339	CTCF.p2:2:0.486
chr8	127396047	127396171	reg1007602.p2	11.503	+	TSC_hg19_v1_chr8_-_126963395 BX648371	-432696	-	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-953530	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-1292012	+	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	174446	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	174615	-	DQ486513 NM_001159542	1031747	+	BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B	1.028387	CTCF.p2:2:0.517	CTCF.p2:63:0.512
chr16	77985817	77985928	reg1007396.p1	11.502	+	TSC_hg19_v1_chr16_+_77822482 AK290153 BC033537 NM_020927 AB046796 CU689646	-163383	+	NM_001105663 NM_001243657 NM_001243660 NM_001243661 TSC_hg19_v1_chr16_+_77756410 AK296963 EU981826	-229439	+	AK293831 BC063283 NM_199355	-516902	-	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	70578	+	NM_001244755	77113	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	147583	+	AK290153|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##BC033537|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_020927|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AB046796|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_001105663|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243657|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243660|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243661|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK296963|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##EU981826|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase	0.22521	CTCF.p2:-14:0.225
chr3	52038354	52038502	reg1008325.p1	11.502	+	BC008926 NM_000992 TSC_hg19_v1_chr3_-_52029968	-8465	-	TSC_hg19_v1_chr3_-_52029912 BC070190 AK289538 AK311884 D28412	-8515	-	TSC_hg19_v1_chr3_-_52029890 BC071663 U49083 U10248 Z49148 BC071909 BC070481	-8547	-	X93921 TSC_hg19_v1_chr3_-_52090192 BC019107 AF508727 BC104880 BC104882 NM_001947	51847	-	TSC_hg19_v1_chr3_-_52188413 BC119692 AK075289 BC119693 AK315688	150002	-	BC110877 NM_001161580 NM_001161581 NM_015426	150277	-	BC008926|RPL29|6159|ribosomal protein L29##NM_000992|RPL29|6159|ribosomal protein L29##BC070190|RPL29|6159|ribosomal protein L29##AK289538|RPL29|6159|ribosomal protein L29##AK311884|RPL29|6159|ribosomal protein L29##D28412|RPL29|6159|ribosomal protein L29##BC071663|RPL29|6159|ribosomal protein L29##U49083|RPL29|6159|ribosomal protein L29##U10248|RPL29|6159|ribosomal protein L29##Z49148|RPL29|6159|ribosomal protein L29##BC071909|RPL29|6159|ribosomal protein L29##BC070481|RPL29|6159|ribosomal protein L29##X93921|DUSP7|1849|dual specificity phosphatase 7##BC019107|DUSP7|1849|dual specificity phosphatase 7##AF508727|DUSP7|1849|dual specificity phosphatase 7##BC104880|DUSP7|1849|dual specificity phosphatase 7##BC104882|DUSP7|1849|dual specificity phosphatase 7##NM_001947|DUSP7|1849|dual specificity phosphatase 7##BC119692|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK075289|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC119693|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK315688|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC110877|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161580|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161581|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_015426|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)	0.875637	CTCF.p2:-26:0.876
chr10	118934482	118934612	reg1009538.p1	11.501	+	AK127095 NM_001112704 NM_199131	-36736	-	NM_001127211 NM_018330 TSC_hg19_v1_chr10_-_118765131 AK091381 AX746947	-169435	-	TSC_hg19_v1_chr10_-_118764901 AK095703	-169723	-	AB087138 AB464053 NM_181840	22452	+	NM_003054 BC030593 TSC_hg19_v1_chr10_+_119000626 AK314997 L23205 L09118 X71354 L14269 BC108927 BC108928	66103	+	CU688476 TSC_hg19_v1_chr10_-_119134939 BC012186 BC028375 NM_173791 AK091746 AX747159 BC033019	200334	-	AK127095|VAX1|11023|ventral anterior homeobox 1##NM_001112704|VAX1|11023|ventral anterior homeobox 1##NM_199131|VAX1|11023|ventral anterior homeobox 1##NM_001127211|KIAA1598|57698|KIAA1598##NM_018330|KIAA1598|57698|KIAA1598##AK091381|KIAA1598|57698|KIAA1598##AK095703|KIAA1598|57698|KIAA1598##AB087138|KCNK18|338567|potassium channel, subfamily K, member 18##NM_181840|KCNK18|338567|potassium channel, subfamily K, member 18##NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC012186|PDZD8|118987|PDZ domain containing 8##BC028375|PDZD8|118987|PDZ domain containing 8##NM_173791|PDZD8|118987|PDZ domain containing 8##AK091746|PDZD8|118987|PDZ domain containing 8##BC033019|PDZD8|118987|PDZ domain containing 8	1.171225	CTCF.p2:6:0.996
chr11	115740640	115740757	reg1007055.p1	11.501	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-365518	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-652050	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1191450	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	903000	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	918017	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	918040	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.0	
chr7	20022583	20022735	reg1006836.p1	11.501	+	BX648384 NM_152774	-210256	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	-274013	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	-837646	-	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	234321	-	AK295044 TSC_hg19_v1_chr7_+_20370337	347678	+	BC002630 NM_002214 M73780	348075	+	BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##AK295044|ITGB8|3696|integrin, beta 8##BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8	0.301949	CTCF.p2:-29:0.302
chr1	222182583	222182725	reg1008847.p1	11.500	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-267168	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-267224	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-267246	-	AY358602 BC007638 BC016552 NM_024746	538780	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	580523	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	608746	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.034016	
chrX	68505930	68506072	reg1009232.p1	11.500	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	-120695	-	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	-457146	+	TSC_hg19_v1_chrX_+_67913490 D80011	-592510	+	AF087142 NM_015686 BC136518 BC136519	219082	+	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	329934	+	AB528121 AY605053 NM_001002254	763783	-	AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B##AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A##AY605053|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##NM_001002254|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2	0.999791	CTCF.p2:13:1.000
chr12	111751695	111751815	reg1006959.p2	11.499	+	BC151245 NM_015267 AB006631 AF271236	-279883	+	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	-393377	-	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-466952	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	55091	-	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	55155	-	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	91994	+	BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3	0.999866	CTCF.p2:1:1.000
chr2	207854233	207854344	reg1007067.p2	11.499	+	BC112076 BC112078 NM_173077 AJ422118	-49988	+	AK021557 TSC_hg19_v1_chr2_+_207630326 AK001516 AF223470 AL833877	-223965	+	NM_001136193 NM_001136194 NM_014929	-224177	+	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	176368	-	BC012919 TSC_hg19_v1_chr2_-_208031680	177337	-	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	540355	+	BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##AK021557|FASTKD2|22868|FAST kinase domains 2##AK001516|FASTKD2|22868|FAST kinase domains 2##AF223470|FASTKD2|22868|FAST kinase domains 2##AL833877|FASTKD2|22868|FAST kinase domains 2##NM_001136193|FASTKD2|22868|FAST kinase domains 2##NM_001136194|FASTKD2|22868|FAST kinase domains 2##NM_014929|FASTKD2|22868|FAST kinase domains 2##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1	0.103267	
chr1	24477081	24477201	reg1009054.p1	11.498	+	AB590595 CU688622 AF286095 TSC_hg19_v1_chr1_-_24469610 AK226001 BC029273 BC014096 AK308522 AK292204 AK313971 NM_021258	-7469	-	BX647453 BX647644 BX647455 NM_152372 BC067101	-38492	-	TSC_hg19_v1_chr1_-_24434930 AK125972 BX537911	-42172	-	AF439325 AY129151 AY129152 AY129153 AB590083 AK160364 AJ534330 AJ534331 BC101407 BC101408 BC101975 BC139722 NM_170743 NM_173064 NM_173065 TSC_hg19_v1_chr1_-_24513772 BC140872	36634	-	NM_198173 NM_198174 TSC_hg19_v1_chr1_+_24645846	168687	+	AK074386 TSC_hg19_v1_chr1_+_24645958 AK315164 BC036890 NM_001195010	168843	+	AF286095|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK226001|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC029273|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC014096|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK308522|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK292204|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK313971|IL22RA1|58985|interleukin 22 receptor, alpha 1##NM_021258|IL22RA1|58985|interleukin 22 receptor, alpha 1##BX647453|MYOM3|127294|myomesin family, member 3##BX647644|MYOM3|127294|myomesin family, member 3##BX647455|MYOM3|127294|myomesin family, member 3##NM_152372|MYOM3|127294|myomesin family, member 3##BC067101|MYOM3|127294|myomesin family, member 3##AK125972|MYOM3|127294|myomesin family, member 3##BX537911|MYOM3|127294|myomesin family, member 3##AF439325|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129151|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129152|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129153|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AK160364|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AJ534330|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AJ534331|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101407|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101408|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101975|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC139722|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_170743|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_173064|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_173065|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC140872|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_198173|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_198174|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK074386|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK315164|GRHL3|57822|grainyhead-like 3 (Drosophila)##BC036890|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_001195010|GRHL3|57822|grainyhead-like 3 (Drosophila)	0.988968	CTCF.p2:-5:0.989
chr4	140216927	140217053	reg1007514.p1	11.498	+	CR457005 AF047184 TSC_hg19_v1_chr4_-_140216970 AF047435 AK291147 BC101798 BC112061	-17	-	BC037987 BC104173 BC104174 AF329088 AF484960 NM_032623	-15575	-	TSC_hg19_v1_chr4_-_140098351 AK311505	-118653	-	BC107682 NM_001184986 NM_001184991 NM_002494	5382	-	AK314626 TSC_hg19_v1_chr4_+_140222652 AK304417 AF327722 AK023402 AY039242	5652	+	TSC_hg19_v1_chr4_+_140222680 NM_057175 BC039818 AJ314788 BC093928 BC104806 AB528041 AY112670 AK023387	5821	+	CR457005|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF047184|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF047435|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AK291147|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC101798|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC112061|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC037987|C4orf49|84709|chromosome 4 open reading frame 49##BC104173|C4orf49|84709|chromosome 4 open reading frame 49##BC104174|C4orf49|84709|chromosome 4 open reading frame 49##AF329088|C4orf49|84709|chromosome 4 open reading frame 49##AF484960|C4orf49|84709|chromosome 4 open reading frame 49##NM_032623|C4orf49|84709|chromosome 4 open reading frame 49##BC107682|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184986|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184991|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_002494|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AK314626|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AK304417|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AF327722|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AK023402|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AY039242|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##NM_057175|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##BC039818|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AJ314788|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##BC093928|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##BC104806|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AY112670|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AK023387|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit	1.087554	CTCF.p2:14:0.998
chr5	56516866	56516996	reg1007771.p1	11.498	+	NM_001127236 AL136844 AB463051 AM392551 AM393442	-7003	+	BC113004 NM_001127235	-45658	+	TSC_hg19_v1_chr5_+_56469911 AL161991 AY226828	-47034	+	BC137470 BC137473 BX648504 NM_001017992	261663	-	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	1239005	-	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	1270363	+	NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1##AL161991|GPBP1|65056|GC-rich promoter binding protein 1##AY226828|GPBP1|65056|GC-rich promoter binding protein 1##BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane	0.145437	
chr1	29529474	29529613	reg1010147.p1	11.497	+	NM_005626 TSC_hg19_v1_chr1_-_29508638	-20904	-	TSC_hg19_v1_chr1_-_29508396 AK310528 AK293706 AK223444	-21145	-	AK291509 BC002781 TSC_hg19_v1_chr1_-_29508360	-21177	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	27837	-	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	27904	-	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	33505	+	NM_005626|SRSF4|6429|serine/arginine-rich splicing factor 4##AK310528|SRSF4|6429|serine/arginine-rich splicing factor 4##AK293706|SRSF4|6429|serine/arginine-rich splicing factor 4##AK223444|SRSF4|6429|serine/arginine-rich splicing factor 4##AK291509|SRSF4|6429|serine/arginine-rich splicing factor 4##BC002781|SRSF4|6429|serine/arginine-rich splicing factor 4##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U	0.999749	CTCF.p2:16:1.000
chr1	91631816	91631929	reg1003232.p3	11.497	+	BC150177 TSC_hg19_v1_chr1_-_91487794 NM_032186 NM_201269	-144082	-	TSC_hg19_v1_chr1_-_91487593 BC110841 BC132776 BC132778	-144237	-	TSC_hg19_v1_chr1_-_91487586 BC092462	-144283	-	TSC_hg19_v1_chr1_-_91870367 AB058637 AK294754 AK302582 AB058636 AB204867 NM_001017975	238500	-	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	334547	+	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	334809	+	BC150177|ZNF644|84146|zinc finger protein 644##NM_032186|ZNF644|84146|zinc finger protein 644##NM_201269|ZNF644|84146|zinc finger protein 644##BC110841|ZNF644|84146|zinc finger protein 644##BC132776|ZNF644|84146|zinc finger protein 644##BC132778|ZNF644|84146|zinc finger protein 644##BC092462|ZNF644|84146|zinc finger protein 644##AB058637|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK294754|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK302582|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB058636|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB204867|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001017975|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	0.999467	CTCF.p2:-2:0.999
chr2	152095492	152095616	reg1009799.p1	11.497	+	X97758 BC012513 TSC_hg19_v1_chr2_-_151344182 AK298007 AK311312 NM_005168 AK313224	-751390	-	TSC_hg19_v1_chr2_-_150444290 NM_015702	-1651247	-	TSC_hg19_v1_chr2_-_150444250 BC023995 BC010894 AK310001 AF161510 BC022859 BC000932	-1651297	-	TSC_hg19_v1_chr2_-_152118378 BC136410 BC136411 AK127552 NM_198557	22779	-	TSC_hg19_v1_chr2_-_152146171 BC001268	50598	-	U32849 AK124323 TSC_hg19_v1_chr2_-_152146429 AK291548 AK298754 NM_004688	50849	-	X97758|RND3|390|Rho family GTPase 3##BC012513|RND3|390|Rho family GTPase 3##AK298007|RND3|390|Rho family GTPase 3##NM_005168|RND3|390|Rho family GTPase 3##AK313224|RND3|390|Rho family GTPase 3##NM_015702|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC023995|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC010894|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK310001|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF161510|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC022859|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC000932|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC136410|RBM43|375287|RNA binding motif protein 43##BC136411|RBM43|375287|RNA binding motif protein 43##AK127552|RBM43|375287|RNA binding motif protein 43##NM_198557|RBM43|375287|RNA binding motif protein 43##BC001268|NMI|9111|N-myc (and STAT) interactor##U32849|NMI|9111|N-myc (and STAT) interactor##AK124323|NMI|9111|N-myc (and STAT) interactor##AK291548|NMI|9111|N-myc (and STAT) interactor##AK298754|NMI|9111|N-myc (and STAT) interactor##NM_004688|NMI|9111|N-myc (and STAT) interactor	0.154793	
chr10	110543817	110543932	reg1007619.p1	11.496	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-1619498	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-2084815	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-4142829	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	1139335	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	1139403	-	NM_019903 AB209810 BC057285	1221907	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.980918	CTCF.p2:25:0.981
chr10	124039299	124039434	reg1007763.p1	11.496	+	AK058088 NM_144587 BC109261 BC109262	-8537	+	NM_006997 NM_206860 TSC_hg19_v1_chr10_+_123923144 BC141837 BC142673 AF095791	-116135	+	BC039311 TSC_hg19_v1_chr10_+_123923007	-116391	+	NM_001001974 TSC_hg19_v1_chr10_+_124134144	94753	+	AK314660 TSC_hg19_v1_chr10_+_124134274 BC001136	94879	+	AK057463 NM_001195608	106218	+	AK058088|BTBD16|118663|BTB (POZ) domain containing 16##NM_144587|BTBD16|118663|BTB (POZ) domain containing 16##BC109261|BTBD16|118663|BTB (POZ) domain containing 16##BC109262|BTBD16|118663|BTB (POZ) domain containing 16##NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_001001974|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##AK314660|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##BC001136|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##AK057463|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##NM_001195608|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	0.678651	CTCF.p2:-23:0.679
chr8	135697939	135698052	reg1007723.p2	11.496	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-1113898	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-1388498	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1494665	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	10799	-	TSC_hg19_v1_chr8_-_135725053 AB463359	27084	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	27279	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.254787	CTCF.p2:15:0.255
chr1	204958558	204958694	reg1010354.p1	11.495	+	TSC_hg19_v1_chr1_+_204938044 BC008124	-20564	+	NM_001160331 BC137013 BC144454 BC144455 AB384522	-45228	+	TSC_hg19_v1_chr1_+_204839989 AK308686	-118643	+	TSC_hg19_v1_chr1_+_205012339 NM_005076	53712	+	X67734 X68274 TSC_hg19_v1_chr1_+_205012450	53812	+	BC061592 AY359081 NM_203376 AK303432	94961	-	BC008124|NFASC|23114|neurofascin##NM_001160331|NFASC|23114|neurofascin##BC137013|NFASC|23114|neurofascin##BC144454|NFASC|23114|neurofascin##BC144455|NFASC|23114|neurofascin##AK308686|NFASC|23114|neurofascin##NM_005076|CNTN2|6900|contactin 2 (axonal)##X67734|CNTN2|6900|contactin 2 (axonal)##X68274|CNTN2|6900|contactin 2 (axonal)##BC061592|TMEM81|388730|transmembrane protein 81##AY359081|TMEM81|388730|transmembrane protein 81##NM_203376|TMEM81|388730|transmembrane protein 81##AK303432|TMEM81|388730|transmembrane protein 81	0.435438	CTCF.p2:-10:0.435
chr15	101840630	101840732	reg1007577.p1	11.495	+	TSC_hg19_v1_chr15_-_101835457 AK223110 AK312200 X13482 BC022816 AK290078 AK223070 BC067846 NM_003090	-5250	-	TSC_hg19_v1_chr15_-_101835402 AB528428 CU692724 AJ130971 AJ130972 DQ892838 DQ896084 BC071717	-5300	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	-23018	-	TSC_hg19_v1_chr15_-_102029640 AM491522	188956	-	TSC_hg19_v1_chr15_-_102029907 D28513	189209	-	TSC_hg19_v1_chr15_-_102029982 D87993 D87994 D87995	189274	-	AK223110|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK312200|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##X13482|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC022816|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK290078|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK223070|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC067846|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##NM_003090|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AJ130971|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AJ130972|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##DQ892838|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##DQ896084|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC071717|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S##AM491522|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D28513|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87993|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87994|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87995|PCSK6|5046|proprotein convertase subtilisin/kexin type 6	0.771766	CTCF.p2:-10:0.772
chr7	81863894	81864045	reg1008066.p1	11.495	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-464595	-	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-1315295	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-1315535	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	208877	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	209111	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	927900	-	FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)	0.895187	CTCF.p2:-13:0.895
chr11	20375512	20375642	reg1009950.p1	11.494	+	NM_001029865	-193708	-	AK290458 TSC_hg19_v1_chr11_+_20070637	-304954	+	TSC_hg19_v1_chr11_+_20049136 AK307574	-326445	+	NM_006410 TSC_hg19_v1_chr11_+_20385245 NM_001098521	9665	+	TSC_hg19_v1_chr11_+_20385268 AK292092 NM_001098520	9704	+	TSC_hg19_v1_chr11_+_20385346 BC002439 NM_001098522	9786	+	NM_001029865|DBX1|120237|developing brain homeobox 1##AK290458|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##NM_006410|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098521|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AK292092|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098520|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##BC002439|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098522|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa	0.461739	CTCF.p2:0:0.462
chr2	64116036	64116175	reg1007534.p1	11.494	+	BX647825 NM_006759 AK314263 TSC_hg19_v1_chr2_+_64069029 BC047004 BC000173	-47079	+	TSC_hg19_v1_chr2_+_64068125 NM_001001521 BC002954 U27460	-47902	+	TSC_hg19_v1_chr2_+_63816146 NM_001199111 NM_001199112 AK295931 AK300719	-299805	+	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	130157	-	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	130400	-	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	255419	-	BX647825|UGP2|7360|UDP-glucose pyrophosphorylase 2##NM_006759|UGP2|7360|UDP-glucose pyrophosphorylase 2##AK314263|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC047004|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC000173|UGP2|7360|UDP-glucose pyrophosphorylase 2##NM_001001521|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC002954|UGP2|7360|UDP-glucose pyrophosphorylase 2##U27460|UGP2|7360|UDP-glucose pyrophosphorylase 2##NM_001199111|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##NM_001199112|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##AK295931|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##AK300719|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)	0.9824	CTCF.p2:27:0.982
chrX	131747154	131747276	reg1008850.p1	11.494	+	BC042090 NM_001170704 TSC_hg19_v1_chrX_-_131624064	-123182	-	AF491305 EU446986 BC074775 BC074776 AB077698 AB077699 AF467070 AJ427918 AJ427919 AY072692 NM_018388 NM_133486	-173538	-	AY372211 AK002178 NM_001170701 NM_001170702 AK300248 NM_001170703	-199630	-	TSC_hg19_v1_chrX_-_132091486 BC037325 AK295118 AL049679 AB067777 AB067776 AK295041	344186	-	AK075402 TSC_hg19_v1_chrX_-_132092281 BC094718	345041	-	AK056706 NM_001077188 NM_147175	348207	-	BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)##EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC037325|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295118|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AL049679|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067777|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067776|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295041|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK056706|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_001077188|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_147175|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2	0.468756	CTCF.p2:-1:0.469
chr11	16627873	16627995	reg1008504.p1	11.493	+	AF309034 NM_033326	-130009	-	BC037866 NM_001145811	-197507	-	AL136780 AK310506 BC047064 NM_001145819 NM_017508	-203533	-	NM_014267 TSC_hg19_v1_chr11_+_16760165	132226	+	TSC_hg19_v1_chr11_+_16760204 BC103747 AK315382 BC007103 BC016352 BC020937 U51678 CR456882 CU675547 AK124165	132350	+	TSC_hg19_v1_chr11_-_16996590 D28414	368642	-	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##NM_014267|C11orf58|10944|chromosome 11 open reading frame 58##BC103747|C11orf58|10944|chromosome 11 open reading frame 58##AK315382|C11orf58|10944|chromosome 11 open reading frame 58##BC007103|C11orf58|10944|chromosome 11 open reading frame 58##BC016352|C11orf58|10944|chromosome 11 open reading frame 58##BC020937|C11orf58|10944|chromosome 11 open reading frame 58##U51678|C11orf58|10944|chromosome 11 open reading frame 58##CR456882|C11orf58|10944|chromosome 11 open reading frame 58##D28414|RPL36A|6173|ribosomal protein L36a	0.993561	CTCF.p2:-1:0.994
chr3	101532716	101532863	reg1007885.p1	11.493	+	AK289689 NM_001134456	-34504	+	TSC_hg19_v1_chr3_+_101498080 BC009431	-34701	+	NM_145037 TSC_hg19_v1_chr3_+_101498054	-34741	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	14171	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	35585	+	AY090780 NM_175056 BC143817	621078	+	AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##BC009431|FAM55C|91775|family with sequence similarity 55, member C##NM_145037|FAM55C|91775|family with sequence similarity 55, member C##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1	0.765601	CTCF.p2:-31:0.766
chr4	10551401	10551519	reg1009490.p1	11.493	+	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-92450	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-432924	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-432982	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	134941	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	879072	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2934491	-	BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family	0.882815	CTCF.p2:7:0.883
chr1	112933574	112933707	reg1007444.p1	11.492	+	AY863198 AF120491 NM_004980 NM_172198	-401918	-	TSC_hg19_v1_chr1_+_112298524 AK301697 AK001506 BC031062 BC011556 AF106019 AF155803 AK314312 DQ892249 DQ895449 CU679958	-635091	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	-635205	-	NM_018704 TSC_hg19_v1_chr1_+_112938844 AK023340	5186	+	TSC_hg19_v1_chr1_+_112938871 BC016029 AK022544 AK092791 AX747733	5228	+	AB045116 NM_004185	76399	+	AF120491|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_004980|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_172198|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##AK301697|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK001506|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC031062|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC011556|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF106019|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF155803|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK314312|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ892249|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ895449|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B##NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like##BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK092791|LOC100129406|100129406|uncharacterized LOC100129406##AB045116|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_004185|WNT2B|7482|wingless-type MMTV integration site family, member 2B	0.990882	CTCF.p2:-13:0.991
chr15	44611737	44611877	reg1008211.p2	11.492	+	TSC_hg19_v1_chr15_+_44581110 AK298564 AL832333 AK291026 CU680228 CU687742	-30672	+	BC063480 AY358086 TSC_hg19_v1_chr15_+_44580965	-30848	+	AK098265 TSC_hg19_v1_chr15_+_44580937	-30866	+	NM_016396	107771	+	TSC_hg19_v1_chr15_+_44719826 AK291230 AF161478 AF161543	107989	+	TSC_hg19_v1_chr15_+_44719836 BC018623 AK226094 DQ128104 BC035744	108103	+	AK298564|CASC4|113201|cancer susceptibility candidate 4##AL832333|CASC4|113201|cancer susceptibility candidate 4##AK291026|CASC4|113201|cancer susceptibility candidate 4##BC063480|CASC4|113201|cancer susceptibility candidate 4##AY358086|CASC4|113201|cancer susceptibility candidate 4##AK098265|CASC4|113201|cancer susceptibility candidate 4##NM_016396|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##AK291230|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##AF161478|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##AF161543|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##BC018623|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##AK226094|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##DQ128104|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##BC035744|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	0.024208	
chr1	9785196	9785299	reg1008257.p1	11.492	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	-73443	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-136291	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-185611	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	98648	-	TSC_hg19_v1_chr1_-_9884023 AK304813	98774	-	TSC_hg19_v1_chr1_-_9884024 BC033902	98797	-	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1	1.539926	CTCF.p2:-17:0.611	CTCF.p2:33:0.929
chr4	79963378	79963483	reg1007286.p2	11.492	+	AK055774 BX648346 CU689134 AY424281 BC029604 TSC_hg19_v1_chr4_-_79860593 BC031256 BC047510 AK291232 NM_001040202 AX775925	-102948	-	TSC_hg19_v1_chr4_+_79697552 AK292147 BC036021 DQ890994	-265807	+	NM_017593 NM_198892 TSC_hg19_v1_chr4_+_79697532	-265894	+	BC063623 BC080651 BC004552 NM_032693	283731	-	CU688758 DQ891321 DQ894505 BC058888 AK312768 BC029820 BC048274 X78712 NM_033214 AK292241 BC027598	365937	-	AB527650 AY233452 TSC_hg19_v1_chr4_-_80993874 AY040326 BC114374 AB209913	1030458	-	AK055774|PAQR3|152559|progestin and adipoQ receptor family member III##BX648346|PAQR3|152559|progestin and adipoQ receptor family member III##AY424281|PAQR3|152559|progestin and adipoQ receptor family member III##BC029604|PAQR3|152559|progestin and adipoQ receptor family member III##BC031256|PAQR3|152559|progestin and adipoQ receptor family member III##BC047510|PAQR3|152559|progestin and adipoQ receptor family member III##AK291232|PAQR3|152559|progestin and adipoQ receptor family member III##NM_001040202|PAQR3|152559|progestin and adipoQ receptor family member III##AX775925|PAQR3|152559|progestin and adipoQ receptor family member III##AK292147|BMP2K|55589|BMP2 inducible kinase##BC036021|BMP2K|55589|BMP2 inducible kinase##DQ890994|BMP2K|55589|BMP2 inducible kinase##NM_017593|BMP2K|55589|BMP2 inducible kinase##NM_198892|BMP2K|55589|BMP2 inducible kinase##BC063623|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC080651|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC004552|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##NM_032693|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##DQ891321|GK2|2712|glycerol kinase 2##DQ894505|GK2|2712|glycerol kinase 2##BC058888|GK2|2712|glycerol kinase 2##BC029820|GK2|2712|glycerol kinase 2##BC048274|GK2|2712|glycerol kinase 2##X78712|GK2|2712|glycerol kinase 2##NM_033214|GK2|2712|glycerol kinase 2##AK292241|GK2|2712|glycerol kinase 2##BC027598|GK2|2712|glycerol kinase 2##AY233452|ANTXR2|118429|anthrax toxin receptor 2##AY040326|ANTXR2|118429|anthrax toxin receptor 2##BC114374|ANTXR2|118429|anthrax toxin receptor 2##AB209913|ANTXR2|118429|anthrax toxin receptor 2	0.455101	CTCF.p2:-6:0.455
chr5	66053190	66053301	reg1007734.p1	11.492	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-161037	+	BC067770 NM_139168	-612583	+	TSC_hg19_v1_chr5_+_65440162 AK308287 BC017000 AK091758 AX747166 BC047322	-613076	+	AY830839 BC018692 NM_015183	71358	+	BC109069 BC109070 D83597 NM_005582 AK313177	439355	-	TSC_hg19_v1_chr5_+_67511583 NM_181523	1458335	+	NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC067770|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_139168|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK308287|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC017000|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK091758|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC047322|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.990702	CTCF.p2:7:0.991
chr11	43911911	43912024	reg1008370.p1	11.491	+	TSC_hg19_v1_chr11_+_43902380 NM_139178 AK315266 AB042029 BC067257	-9574	+	NM_016142 TSC_hg19_v1_chr11_+_43702287 AK027882 AK075011 AK292625 AK075216 AK074952 AF078850 BC012043 AK222881 AK301663 BC012536 EU176708	-209709	+	TSC_hg19_v1_chr11_+_43665785 AK095484	-246183	+	TSC_hg19_v1_chr11_+_43964186 NM_001145033 BC052560	52042	+	AB231734 NM_001031854 BC144554	157580	+	NM_001127219 NM_032592 AK057649 BC020197 AY026508 AK304074 TSC_hg19_v1_chr11_+_44088043 AK307380	175939	+	NM_139178|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AK315266|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AB042029|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##BC067257|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##NM_016142|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK027882|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075011|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK292625|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075216|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK074952|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AF078850|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012043|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK222881|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK301663|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012536|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##EU176708|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##NM_001145033|C11orf96|387763|chromosome 11 open reading frame 96##BC052560|C11orf96|387763|chromosome 11 open reading frame 96##AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##NM_001127219|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##NM_032592|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK057649|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##BC020197|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AY026508|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK304074|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK307380|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)	0.010816	
chr1	42642735	42642841	reg1006685.p1	11.491	+	M95174 M97496 NM_033553	-12398	-	NM_007102 U34279 BC093781 Z50753 BC093779 BC069301	-23692	+	TSC_hg19_v1_chr1_-_42501606 BC046120	-141159	-	TSC_hg19_v1_chr1_-_42776761 AB463045	133973	-	TSC_hg19_v1_chr1_-_42800873 AB028964 BC152441 NM_001198851 BC151828	157964	-	TSC_hg19_v1_chr1_-_42800884 BC014182 NM_001198852	158102	-	M95174|GUCA2A|2980|guanylate cyclase activator 2A (guanylin)##M97496|GUCA2A|2980|guanylate cyclase activator 2A (guanylin)##NM_033553|GUCA2A|2980|guanylate cyclase activator 2A (guanylin)##NM_007102|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##U34279|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC093781|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##Z50753|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC093779|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC069301|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB028964|FOXJ3|22887|forkhead box J3##BC152441|FOXJ3|22887|forkhead box J3##NM_001198851|FOXJ3|22887|forkhead box J3##BC151828|FOXJ3|22887|forkhead box J3##BC014182|FOXJ3|22887|forkhead box J3##NM_001198852|FOXJ3|22887|forkhead box J3	0.010509	
chr13	77477825	77477934	reg1007526.p2	11.489	+	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	-17272	-	BC013764 TSC_hg19_v1_chr13_-_77460431	-17479	-	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-1143039	+	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	88290	+	TSC_hg19_v1_chr13_-_77601295 AL833187 BC063796 BC072448	123403	-	TSC_hg19_v1_chr13_-_77601303 AK314442 NM_012158	123452	-	AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AL833187|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC063796|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC072448|FBXL3|26224|F-box and leucine-rich repeat protein 3##AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3	0.4099	CTCF.p2:0:0.410
chr16	67433441	67433584	reg1007839.p2	11.489	+	TSC_hg19_v1_chr16_-_67427402 AF132972 AF078846 BC000691 NM_015964 NM_016140	-6133	-	AK311487 NM_001161575 AK297329 AK309897 AK001866 AK292311 AY313780 AK301766	-52234	+	TSC_hg19_v1_chr16_+_67360728 AY963267 BC026156 NM_018296 BC018031	-72760	+	TSC_hg19_v1_chr16_-_67450360 NM_013304 U90653 BC021908	16785	-	TSC_hg19_v1_chr16_+_67465023 U26726 BC036780 BC064536 NM_000196 U14631	31518	+	CU679153 DQ893270 DQ896601 X71490 TSC_hg19_v1_chr16_-_67515051 AK300570 AK313035 AK125522 BC008861 NM_004691	81532	-	AF132972|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AF078846|TPPP3|51673|tubulin polymerization-promoting protein family member 3##BC000691|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_015964|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_016140|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AK311487|LRRC36|55282|leucine rich repeat containing 36##NM_001161575|LRRC36|55282|leucine rich repeat containing 36##AK297329|LRRC36|55282|leucine rich repeat containing 36##AK309897|LRRC36|55282|leucine rich repeat containing 36##AK001866|LRRC36|55282|leucine rich repeat containing 36##AK292311|LRRC36|55282|leucine rich repeat containing 36##AY313780|LRRC36|55282|leucine rich repeat containing 36##AK301766|LRRC36|55282|leucine rich repeat containing 36##AY963267|LRRC36|55282|leucine rich repeat containing 36##BC026156|LRRC36|55282|leucine rich repeat containing 36##NM_018296|LRRC36|55282|leucine rich repeat containing 36##BC018031|LRRC36|55282|leucine rich repeat containing 36##NM_013304|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U90653|ZDHHC1|29800|zinc finger, DHHC-type containing 1##BC021908|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##DQ893270|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##DQ896601|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##X71490|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK300570|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK313035|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK125522|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##BC008861|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_004691|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1	0.929962	CTCF.p2:-2:0.901
chr18	47745274	47745403	reg1010662.p1	11.489	+	AB384567 AB032945 TSC_hg19_v1_chr18_-_47721518 AB290160 BC032511 NM_001080467	-23966	-	TSC_hg19_v1_chr18_-_47376221 BC033527	-369149	-	TSC_hg19_v1_chr18_+_47340396 AK123464	-404947	+	AB527886 BC030606 NM_145020 AK302114	47494	-	AF078830 AF078831 AF078832 AF078833 EF488685 AB527669 NM_001204151	61035	-	AK295401 TSC_hg19_v1_chr18_-_47807854 BC012487 BC047353 AK302004 AJ564845 Y10746 AK225948	62431	-	AB032945|MYO5B|4645|myosin VB##AB290160|MYO5B|4645|myosin VB##BC032511|MYO5B|4645|myosin VB##NM_001080467|MYO5B|4645|myosin VB##BC033527|MYO5B|4645|myosin VB##BC030606|CCDC11|220136|coiled-coil domain containing 11##NM_145020|CCDC11|220136|coiled-coil domain containing 11##AK302114|CCDC11|220136|coiled-coil domain containing 11##AF078830|MBD1|4152|methyl-CpG binding domain protein 1##AF078831|MBD1|4152|methyl-CpG binding domain protein 1##AF078832|MBD1|4152|methyl-CpG binding domain protein 1##AF078833|MBD1|4152|methyl-CpG binding domain protein 1##EF488685|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204151|MBD1|4152|methyl-CpG binding domain protein 1##AK295401|MBD1|4152|methyl-CpG binding domain protein 1##BC047353|MBD1|4152|methyl-CpG binding domain protein 1##AK302004|MBD1|4152|methyl-CpG binding domain protein 1##AJ564845|MBD1|4152|methyl-CpG binding domain protein 1##Y10746|MBD1|4152|methyl-CpG binding domain protein 1##AK225948|MBD1|4152|methyl-CpG binding domain protein 1	0.998463	CTCF.p2:0:0.998
chr5	129534754	129534867	reg1007667.p1	11.488	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	-294323	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-738757	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-1104385	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	966121	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	966180	-	TSC_hg19_v1_chr5_-_130501019 NM_005340	966233	-	BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1##NM_005340|HINT1|3094|histidine triad nucleotide binding protein 1	0.093046	
chr8	8091369	8091490	reg1009318.p1	11.488	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-5287	+	AK292586 NM_001193630	-307571	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-339225	+	TSC_hg19_v1_chr8_-_8175862 AF075060	84459	-	AK122582 NM_001080826	147793	-	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	468269	+	BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23	0.993599	CTCF.p2:0:0.994
chr10	34926531	34926667	reg1009561.p1	11.487	+	TSC_hg19_v1_chr10_-_33623996 BX648025	-1302601	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1302785	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	-1303146	-	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	177552	-	AK310225 AK300491 NM_001198778 NM_001198779	436613	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	452673	-	BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2	0.961816	CTCF.p2:-4:0.962
chr2	29532100	29532235	reg1010333.p1	11.487	+	TSC_hg19_v1_chr2_+_29338370 BC013862 NM_024692 AL834443	-193812	+	NM_001029883	-235041	-	AK296977 NM_199280	-328004	+	EU788003 EU788004 EU788005 EU788006 EU788007 EU788008 EU788009 EU788010 FJ838786 FJ838787 U62540 TSC_hg19_v1_chr2_-_30144453 AK296218 NM_004304	612287	-	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	837603	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	837666	+	BC013862|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_024692|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##AL834443|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71##AK296977|FAM179A|165186|family with sequence similarity 179, member A##NM_199280|FAM179A|165186|family with sequence similarity 179, member A##EU788003|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788004|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788005|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788006|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788007|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788008|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788009|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788010|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838786|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838787|ALK|238|anaplastic lymphoma receptor tyrosine kinase##U62540|ALK|238|anaplastic lymphoma receptor tyrosine kinase##AK296218|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_004304|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)	0.470748	CTCF.p2:0:0.471
chr7	106790996	106791136	reg1008038.p2	11.487	+	TSC_hg19_v1_chr7_+_106685154 BC075800 M31158 NM_002736 AK128639 AK291441 AB384742 AM392728 AM392771 AM393258 AM393700 CU687290	-105863	+	TSC_hg19_v1_chr7_+_106505893 NM_002649 X83368	-285137	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	-285292	+	AK295910 NM_001244262 TSC_hg19_v1_chr7_+_106809447 AK298504 BC017069 NM_012257	18373	+	NM_005295 AK122621 AK307393	319436	+	TSC_hg19_v1_chr7_-_107204366 HQ258000 AF058718	413344	-	BC075800|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##M31158|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##NM_002736|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK128639|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK291441|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392728|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392771|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393258|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393700|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK295910|HBP1|26959|HMG-box transcription factor 1##NM_001244262|HBP1|26959|HMG-box transcription factor 1##AK298504|HBP1|26959|HMG-box transcription factor 1##BC017069|HBP1|26959|HMG-box transcription factor 1##NM_012257|HBP1|26959|HMG-box transcription factor 1##NM_005295|GPR22|2845|G protein-coupled receptor 22##AK122621|GPR22|2845|G protein-coupled receptor 22##AK307393|GPR22|2845|G protein-coupled receptor 22##HQ258000|COG5|10466|component of oligomeric golgi complex 5##AF058718|COG5|10466|component of oligomeric golgi complex 5	0.823221	CTCF.p2:10:0.823
chrX	109651510	109651613	reg1006808.p2	11.487	+	TSC_hg19_v1_chrX_-_109561428 AJ007014	-90115	-	TSC_hg19_v1_chrX_-_109561314 BX648797 NM_001025580 NM_015365	-90215	-	CU687440 TSC_hg19_v1_chrX_-_109561311 AK314596 BC060813	-90256	-	AB037739 AY121804 NM_020769	10723	+	AK091430 NM_001171689	31897	-	BC002909 AK293106 AK297563 AK312270 NM_145234	387472	-	AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BX648797|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001025580|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_015365|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AK314596|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC060813|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AB037739|RGAG1|57529|retrotransposon gag domain containing 1##AY121804|RGAG1|57529|retrotransposon gag domain containing 1##NM_020769|RGAG1|57529|retrotransposon gag domain containing 1##AK091430|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001171689|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC002909|CHRDL1|91851|chordin-like 1##AK293106|CHRDL1|91851|chordin-like 1##AK297563|CHRDL1|91851|chordin-like 1##AK312270|CHRDL1|91851|chordin-like 1##NM_145234|CHRDL1|91851|chordin-like 1	0.775887	CTCF.p2:5:0.776
chr17	21416368	21416481	reg1007304.p2	11.486	+	FJ434338 NM_001194958	-107977	+	TSC_hg19_v1_chr17_+_21279667 BC027982 NM_021012	-136742	+	NM_002756	-225077	+	TSC_hg19_v1_chr17_-_21454933 AK056436 BC132738 BC136630 BC019938 BC010612 BC052777 BC053952 NM_001113434	38499	-	NM_001190452	606012	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	4204698	+	FJ434338|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##NM_001194958|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##BC027982|KCNJ12|3768|potassium inwardly-rectifying channel, subfamily J, member 12##NM_021012|KCNJ12|3768|potassium inwardly-rectifying channel, subfamily J, member 12##NM_002756|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK056436|C17orf51|339263|chromosome 17 open reading frame 51##BC132738|C17orf51|339263|chromosome 17 open reading frame 51##BC136630|C17orf51|339263|chromosome 17 open reading frame 51##BC019938|C17orf51|339263|chromosome 17 open reading frame 51##BC010612|C17orf51|339263|chromosome 17 open reading frame 51##BC052777|C17orf51|339263|chromosome 17 open reading frame 51##BC053952|C17orf51|339263|chromosome 17 open reading frame 51##NM_001113434|C17orf51|339263|chromosome 17 open reading frame 51##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1	0.949893	CTCF.p2:6:0.950
chr17	44290390	44290522	reg1009314.p1	11.486	+	TSC_hg19_v1_chr17_-_44270338 BC098376 NM_015443	-20147	-	TSC_hg19_v1_chr17_-_44270149 BX538006 NM_001193466	-20302	-	TSC_hg19_v1_chr17_+_44101553 AB073354	-188886	+	AK291259 NM_001193465	12271	-	BC040501 CR749232 NM_014834	82040	+	BC020869 AK289590 AK315857 BC041803 BC030570 BX647266 NM_001039083 NM_001103154 NM_001113738 NM_016632	148666	-	BC098376|KIAA1267|284058|KIAA1267##NM_015443|KIAA1267|284058|KIAA1267##BX538006|KIAA1267|284058|KIAA1267##NM_001193466|KIAA1267|284058|KIAA1267##AB073354|MAPT|4137|microtubule-associated protein tau##AK291259|KIAA1267|284058|KIAA1267##NM_001193465|KIAA1267|284058|KIAA1267##BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_014834|LRRC37A|9884|leucine rich repeat containing 37A##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AK289590|ARL17A|51326|ADP-ribosylation factor-like 17A##AK315857|ARL17A|51326|ADP-ribosylation factor-like 17A##BC041803|ARL17A|51326|ADP-ribosylation factor-like 17A##BC030570|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001039083|ARL17B|100506084|ADP-ribosylation factor-like 17B##NM_001103154|ARL17B|100506084|ADP-ribosylation factor-like 17B##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A	0.910217	CTCF.p2:0:0.892
chr1	167237209	167237318	reg1008631.p1	11.485	+	TSC_hg19_v1_chr1_+_167190127 NM_001198786 NM_002697 AK302525 AK303201 AK308004 AK091438 S66901 BC052274 X13403	-47206	+	NM_001080426	-173177	+	CU687006 BC074830 BC074876 TSC_hg19_v1_chr1_-_167059615 BC107164 BC107165 AK312833 BC069705 BC069723 BC069745 BC069761 BC069789 NM_005814 U79725	-177568	-	NM_001198783 TSC_hg19_v1_chr1_+_167298306	61035	+	TSC_hg19_v1_chr1_+_167298389 AY113189 BC001664 BC003571	61176	+	AB590419 CU693020 DQ893778 EU176191 X55510 X55511 X55512 BC025703 AK128376 AK313946 J04132 AK223325 NM_000734 NM_198053	250510	-	NM_001198786|POU2F1|5451|POU class 2 homeobox 1##NM_002697|POU2F1|5451|POU class 2 homeobox 1##AK302525|POU2F1|5451|POU class 2 homeobox 1##AK303201|POU2F1|5451|POU class 2 homeobox 1##AK308004|POU2F1|5451|POU class 2 homeobox 1##AK091438|POU2F1|5451|POU class 2 homeobox 1##BC052274|POU2F1|5451|POU class 2 homeobox 1##X13403|POU2F1|5451|POU class 2 homeobox 1##NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)##BC074830|GPA33|10223|glycoprotein A33 (transmembrane)##BC074876|GPA33|10223|glycoprotein A33 (transmembrane)##BC107164|GPA33|10223|glycoprotein A33 (transmembrane)##BC107165|GPA33|10223|glycoprotein A33 (transmembrane)##AK312833|GPA33|10223|glycoprotein A33 (transmembrane)##BC069705|GPA33|10223|glycoprotein A33 (transmembrane)##BC069723|GPA33|10223|glycoprotein A33 (transmembrane)##BC069745|GPA33|10223|glycoprotein A33 (transmembrane)##BC069761|GPA33|10223|glycoprotein A33 (transmembrane)##BC069789|GPA33|10223|glycoprotein A33 (transmembrane)##NM_005814|GPA33|10223|glycoprotein A33 (transmembrane)##U79725|GPA33|10223|glycoprotein A33 (transmembrane)##NM_001198783|POU2F1|5451|POU class 2 homeobox 1##AY113189|POU2F1|5451|POU class 2 homeobox 1##BC001664|POU2F1|5451|POU class 2 homeobox 1##BC003571|POU2F1|5451|POU class 2 homeobox 1##DQ893778|CD247|919|CD247 molecule##EU176191|CD247|919|CD247 molecule##X55510|CD247|919|CD247 molecule##X55511|CD247|919|CD247 molecule##X55512|CD247|919|CD247 molecule##BC025703|CD247|919|CD247 molecule##AK128376|CD247|919|CD247 molecule##AK313946|CD247|919|CD247 molecule##J04132|CD247|919|CD247 molecule##AK223325|CD247|919|CD247 molecule##NM_000734|CD247|919|CD247 molecule##NM_198053|CD247|919|CD247 molecule	0.977888	CTCF.p2:-12:0.978
chr20	16802250	16802365	reg1008338.p1	11.485	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	-73286	+	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	-91644	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	-248294	-	BC040546 NM_001201528	404444	+	NM_001201529 NM_002594 TSC_hg19_v1_chr20_+_17207617	405303	+	BC001905 TSC_hg19_v1_chr20_+_17207673	405364	+	BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##BC040546|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201528|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201529|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	0.957151	CTCF.p2:4:0.957
chr9	34379452	34379580	reg1009330.p1	11.485	+	TSC_hg19_v1_chr9_-_34376864 BC070098 NM_020702	-2583	-	NM_001161 NM_001244390 NM_147172 NM_147173 TSC_hg19_v1_chr9_+_34329566 AK310574 U30313	-49978	+	TSC_hg19_v1_chr9_-_34329214 NM_194313 AK310014	-50305	-	AK225981 AF367474 TSC_hg19_v1_chr9_-_34381563 AK094751 NM_001252195 NM_147168 NM_147169	2031	-	AK058087 BC022084 BC029484 NM_032596	18301	-	TSC_hg19_v1_chr9_-_34458569 AK299882 AK096350 AK123887 AK294054 BC041009 NM_001184940 NM_001184941 NM_001184942 NM_001184943 NM_001184945 NM_147202	79011	-	BC070098|KIAA1161|57462|KIAA1161##NM_020702|KIAA1161|57462|KIAA1161##NM_001161|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_001244390|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_147172|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_147173|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##U30313|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_194313|KIF24|347240|kinesin family member 24##AK310014|KIF24|347240|kinesin family member 24##AK225981|C9orf24|84688|chromosome 9 open reading frame 24##AF367474|C9orf24|84688|chromosome 9 open reading frame 24##AK094751|C9orf24|84688|chromosome 9 open reading frame 24##NM_001252195|C9orf24|84688|chromosome 9 open reading frame 24##NM_147168|C9orf24|84688|chromosome 9 open reading frame 24##NM_147169|C9orf24|84688|chromosome 9 open reading frame 24##AK058087|C9orf24|84688|chromosome 9 open reading frame 24##BC022084|C9orf24|84688|chromosome 9 open reading frame 24##BC029484|C9orf24|84688|chromosome 9 open reading frame 24##NM_032596|C9orf24|84688|chromosome 9 open reading frame 24##AK299882|C9orf25|203259|chromosome 9 open reading frame 25##AK096350|C9orf25|203259|chromosome 9 open reading frame 25##AK123887|C9orf25|203259|chromosome 9 open reading frame 25##AK294054|C9orf25|203259|chromosome 9 open reading frame 25##BC041009|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184940|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184941|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184942|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184943|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184945|C9orf25|203259|chromosome 9 open reading frame 25##NM_147202|C9orf25|203259|chromosome 9 open reading frame 25	0.756408	CTCF.p2:1:0.756
chrX	75675131	75675274	reg1008650.p1	11.485	+	NM_020932 TSC_hg19_v1_chrX_+_75648083 AB046807 AF490507 AK291270 BC050588	-27098	+	TSC_hg19_v1_chrX_+_75392955 CU674612	-282247	+	AY927529 AY927616 BC001220 NM_016500 TSC_hg19_v1_chrX_+_75392896 AF151079 BC051894	-282363	+	AK297183 TSC_hg19_v1_chrX_-_76814315	1139064	-	L33812 TSC_hg19_v1_chrX_-_76937201	1261977	-	AB102641 BT007188 TSC_hg19_v1_chrX_-_77041551 BC002521	1366329	-	NM_020932|MAGEE1|57692|melanoma antigen family E, 1##AB046807|MAGEE1|57692|melanoma antigen family E, 1##AF490507|MAGEE1|57692|melanoma antigen family E, 1##AK291270|MAGEE1|57692|melanoma antigen family E, 1##BC050588|MAGEE1|57692|melanoma antigen family E, 1##AY927616|CXorf26|51260|chromosome X open reading frame 26##BC001220|CXorf26|51260|chromosome X open reading frame 26##NM_016500|CXorf26|51260|chromosome X open reading frame 26##BC051894|CXorf26|51260|chromosome X open reading frame 26##AK297183|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##L33812|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##AB102641|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##BT007188|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##BC002521|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	0.244106	CTCF.p2:14:0.244
chr10	103061323	103061423	reg1008315.p1	11.484	+	BC136321 BC069156 NM_006562 X90828	-72671	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-170195	+	BC019674 NM_001085398	-170471	-	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	52499	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	286556	-	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	286636	-	BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda	0.2074	
chr3	132254977	132255099	reg1008179.p1	11.483	+	AB014578 BC151246 TSC_hg19_v1_chr3_+_132136540 AY779857 BC043583 NM_015268	-118511	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	-218750	+	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	-218800	+	AK304461 NM_016557 AK313923 AF110640 BC069438	61070	+	NM_178445	63942	+	NM_198329	118251	+	AB014578|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC151246|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AY779857|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC043583|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##NM_015268|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##AK304461|CCRL1|51554|chemokine (C-C motif) receptor-like 1##NM_016557|CCRL1|51554|chemokine (C-C motif) receptor-like 1##AK313923|CCRL1|51554|chemokine (C-C motif) receptor-like 1##AF110640|CCRL1|51554|chemokine (C-C motif) receptor-like 1##BC069438|CCRL1|51554|chemokine (C-C motif) receptor-like 1##NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1##NM_198329|UBA5|79876|ubiquitin-like modifier activating enzyme 5	0.996128	CTCF.p2:-4:0.996
chr16	53583987	53584121	reg1010525.p1	11.482	+	TSC_hg19_v1_chr16_-_53537122 AK303503 BC001134 BC095401 AK222743 AK023320 NM_001012398 NM_022476	-46914	-	TSC_hg19_v1_chr16_+_53479685 BX537767	-104366	+	TSC_hg19_v1_chr16_+_53469560 AK300047	-114508	+	TSC_hg19_v1_chr16_-_53737760 BC136433 AK096333 AK308390 BC017977 CR749645 AK307929 EF565106 NM_001127897 NM_015272 AK304790	153703	-	NM_001080432	153820	+	TSC_hg19_v1_chr16_+_53738067 AK096554 AB051539 AK295196	154014	+	AK303503|AKTIP|64400|AKT interacting protein##BC001134|AKTIP|64400|AKT interacting protein##BC095401|AKTIP|64400|AKT interacting protein##AK222743|AKTIP|64400|AKT interacting protein##AK023320|AKTIP|64400|AKT interacting protein##NM_001012398|AKTIP|64400|AKT interacting protein##NM_022476|AKTIP|64400|AKT interacting protein##BX537767|RBL2|5934|retinoblastoma-like 2 (p130)##AK300047|RBL2|5934|retinoblastoma-like 2 (p130)##BC136433|RPGRIP1L|23322|RPGRIP1-like##AK096333|RPGRIP1L|23322|RPGRIP1-like##AK308390|RPGRIP1L|23322|RPGRIP1-like##BC017977|RPGRIP1L|23322|RPGRIP1-like##CR749645|RPGRIP1L|23322|RPGRIP1-like##AK307929|RPGRIP1L|23322|RPGRIP1-like##EF565106|RPGRIP1L|23322|RPGRIP1-like##NM_001127897|RPGRIP1L|23322|RPGRIP1-like##NM_015272|RPGRIP1L|23322|RPGRIP1-like##AK304790|RPGRIP1L|23322|RPGRIP1-like##NM_001080432|FTO|79068|fat mass and obesity associated##AK096554|FTO|79068|fat mass and obesity associated##AB051539|FTO|79068|fat mass and obesity associated##AK295196|FTO|79068|fat mass and obesity associated	0.030102	
chr9	101299232	101299345	reg1007853.p2	11.482	+	TSC_hg19_v1_chr9_-_101018013 NM_018421	-281284	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	-281567	-	TSC_hg19_v1_chr9_-_100954922 AK292788 BC011690 AB209809 NM_052820	-344355	-	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	171897	-	CR749467 TSC_hg19_v1_chr9_-_101558801 NM_173551	259363	-	TSC_hg19_v1_chr9_+_101569953 AB527376 AB040673 AB078146 AJ132365 NM_024642	270702	+	NM_018421|TBC1D2|55357|TBC1 domain family, member 2##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##AK292788|CORO2A|7464|coronin, actin binding protein, 2A##BC011690|CORO2A|7464|coronin, actin binding protein, 2A##AB209809|CORO2A|7464|coronin, actin binding protein, 2A##NM_052820|CORO2A|7464|coronin, actin binding protein, 2A##DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##CR749467|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##NM_173551|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##AB040673|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AB078146|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AJ132365|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##NM_024642|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)	0.992105	CTCF.p2:-7:0.992
chr9	34074321	34074444	reg1006935.p1	11.481	+	TSC_hg19_v1_chr9_-_34048895 BC111409 AK302335 NM_018449	-25466	-	AB209911 TSC_hg19_v1_chr9_-_34048886 AK302754 AK294952 AK299183 AK303493 CR933678	-25505	-	TSC_hg19_v1_chr9_+_33817704 AJ240087 CR457233	-256710	+	AK000354 AK292935 TSC_hg19_v1_chr9_-_34126623	52204	-	BC063823 TSC_hg19_v1_chr9_-_34126702 AB067479 DQ518909	52313	-	TSC_hg19_v1_chr9_-_34126703 NM_015397	52354	-	BC111409|UBAP2|55833|ubiquitin associated protein 2##AK302335|UBAP2|55833|ubiquitin associated protein 2##NM_018449|UBAP2|55833|ubiquitin associated protein 2##AB209911|UBAP2|55833|ubiquitin associated protein 2##AK302754|UBAP2|55833|ubiquitin associated protein 2##AK294952|UBAP2|55833|ubiquitin associated protein 2##AK299183|UBAP2|55833|ubiquitin associated protein 2##AK303493|UBAP2|55833|ubiquitin associated protein 2##CR933678|UBAP2|55833|ubiquitin associated protein 2##AJ240087|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##CR457233|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK000354|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK292935|DCAF12|25853|DDB1 and CUL4 associated factor 12##BC063823|DCAF12|25853|DDB1 and CUL4 associated factor 12##AB067479|DCAF12|25853|DDB1 and CUL4 associated factor 12##DQ518909|DCAF12|25853|DDB1 and CUL4 associated factor 12##NM_015397|DCAF12|25853|DDB1 and CUL4 associated factor 12	0.964928	CTCF.p2:3:0.965
chr13	30982531	30982620	reg1006398.p1	11.480	+	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-101006	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	-101424	-	TSC_hg19_v1_chr13_-_30424811 NM_007106	-557734	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	57418	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	57483	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	209052	-	AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##NM_007106|UBL3|5412|ubiquitin-like 3##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1	0.0	
chr4	138957027	138957169	reg1009440.p1	11.479	+	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-503456	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-503506	-	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-3834180	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	206266	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	979895	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	1048305	-	AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.964772	CTCF.p2:-3:0.965
chr2	38763349	38763474	reg1009107.p1	11.478	+	TSC_hg19_v1_chr2_-_38604430 NM_001135673 NM_022374	-158980	-	TSC_hg19_v1_chr2_-_38604411 BC053508 AK026946 AK225190 AK303985 AK308894	-159007	-	AK316179 TSC_hg19_v1_chr2_-_38525609	-237842	-	TSC_hg19_v1_chr2_-_38829619 CU675994	66280	-	TSC_hg19_v1_chr2_-_38830012 AY236962	66581	-	TSC_hg19_v1_chr2_-_38830065 AY236963 BC017480 AK291462	66629	-	NM_001135673|ATL2|64225|atlastin GTPase 2##NM_022374|ATL2|64225|atlastin GTPase 2##BC053508|ATL2|64225|atlastin GTPase 2##AK026946|ATL2|64225|atlastin GTPase 2##AK225190|ATL2|64225|atlastin GTPase 2##AK303985|ATL2|64225|atlastin GTPase 2##AK308894|ATL2|64225|atlastin GTPase 2##AK316179|ATL2|64225|atlastin GTPase 2##AY236962|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	0.999894	CTCF.p2:-3:1.000
chr3	179529545	179529672	reg1008334.p1	11.478	+	TSC_hg19_v1_chr3_+_179370901 NM_003940 U75362 BC016146 AK290338 AM393315 AM393392 AM393610 AM393780 DQ892472 DQ895684	-158713	+	TSC_hg19_v1_chr3_+_179322594 NM_001199957 NM_001199958 NM_002492 BX648034 BC005271 BC009796 AK313822 AF047181 BC093071 BC017909 CU679497	-207015	+	AY212270 BC032522 TSC_hg19_v1_chr3_-_179322427 BC021575 NM_020409 NM_177988	-207186	-	AB032593 NM_016559 AB032592 TSC_hg19_v1_chr3_-_179754937 AK299633 AK294501 AK314283 BC036183	225118	-	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	790395	+	AB075860 TSC_hg19_v1_chr3_+_180320970	791355	+	NM_003940|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##U75362|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##BC016146|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AK290338|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393315|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393392|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393610|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393780|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ892472|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ895684|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##NM_001199957|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_001199958|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AY212270|MRPL47|57129|mitochondrial ribosomal protein L47##BC032522|MRPL47|57129|mitochondrial ribosomal protein L47##BC021575|MRPL47|57129|mitochondrial ribosomal protein L47##NM_020409|MRPL47|57129|mitochondrial ribosomal protein L47##NM_177988|MRPL47|57129|mitochondrial ribosomal protein L47##AB032593|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_016559|PEX5L|51555|peroxisomal biogenesis factor 5-like##AB032592|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK299633|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK294501|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK314283|PEX5L|51555|peroxisomal biogenesis factor 5-like##BC036183|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##AB075860|TTC14|151613|tetratricopeptide repeat domain 14	0.522568	CTCF.p2:-14:0.523
chr11	62310345	62310465	reg1007089.p1	11.477	+	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	-123869	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	-205457	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	-205580	+	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	3831	-	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	3909	-	DQ185040 BT006677 CR407625 BC006509 BC006520 CU674184 CU677463 CU680700 BC000384 DQ891103 DQ894284 Z11531 AB527934 BC009865 BC015813 BC018857 BC018853 BC028179 TSC_hg19_v1_chr11_-_62341334 BC013918 AK092787 AK299876 AY542307 BC067738 AK129569 AK129618 AK300729 X63526 AK130026 AK300686 BC031012	30919	-	AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein##DQ185040|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BT006677|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##CR407625|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006509|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006520|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC000384|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ891103|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ894284|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##Z11531|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC009865|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC015813|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018857|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018853|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC028179|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC013918|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK092787|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK299876|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AY542307|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC067738|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129569|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129618|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300729|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##X63526|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK130026|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300686|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC031012|EEF1G|1937|eukaryotic translation elongation factor 1 gamma	0.0	
chr4	981055	981172	reg1005444.p1	11.477	+	TSC_hg19_v1_chr4_+_980831 M74715 NM_000203 AK125223 BC099922 AK291816 BC029959 AB208901	-291	+	TSC_hg19_v1_chr4_-_967335 AB209503 BC063801 NM_001347	-13777	-	AB384698 GU727647 L38707 TSC_hg19_v1_chr4_-_967325	-13816	-	BC015517 AF297659 NM_022042 NM_134425 TSC_hg19_v1_chr4_-_987193 AY124771 NM_213613 AK292747	6082	-	TSC_hg19_v1_chr4_+_1005410 AK172829	24290	+	AF312678 AY358303 NM_001004356 AF279689 NM_001004358	24571	+	M74715|IDUA|3425|iduronidase, alpha-L-##NM_000203|IDUA|3425|iduronidase, alpha-L-##AK125223|IDUA|3425|iduronidase, alpha-L-##BC099922|IDUA|3425|iduronidase, alpha-L-##AK291816|IDUA|3425|iduronidase, alpha-L-##BC029959|IDUA|3425|iduronidase, alpha-L-##AB208901|IDUA|3425|iduronidase, alpha-L-##AB209503|DGKQ|1609|diacylglycerol kinase, theta 110kDa##BC063801|DGKQ|1609|diacylglycerol kinase, theta 110kDa##NM_001347|DGKQ|1609|diacylglycerol kinase, theta 110kDa##GU727647|DGKQ|1609|diacylglycerol kinase, theta 110kDa##L38707|DGKQ|1609|diacylglycerol kinase, theta 110kDa##BC015517|SLC26A1|10861|solute carrier family 26 (sulfate transporter), member 1##AF297659|SLC26A1|10861|solute carrier family 26 (sulfate transporter), member 1##NM_022042|SLC26A1|10861|solute carrier family 26 (sulfate transporter), member 1##NM_134425|SLC26A1|10861|solute carrier family 26 (sulfate transporter), member 1##AY124771|SLC26A1|10861|solute carrier family 26 (sulfate transporter), member 1##NM_213613|SLC26A1|10861|solute carrier family 26 (sulfate transporter), member 1##AK292747|SLC26A1|10861|solute carrier family 26 (sulfate transporter), member 1##AK172829|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF312678|FGFRL1|53834|fibroblast growth factor receptor-like 1##AY358303|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004356|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF279689|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004358|FGFRL1|53834|fibroblast growth factor receptor-like 1	0.023304	
chr8	30239856	30240011	reg1009206.p1	11.477	+	Z36874 TSC_hg19_v1_chr8_+_30209759	-30196	+	D84145 NM_006571 TSC_hg19_v1_chr8_+_30013882 AK314128 BC013175 CR456851	-226078	+	NM_001100916 EU518495	-237733	-	NM_001008710 NM_001008711 NM_001008712 NM_006867 AK304858 D84107 D84108 D84109 D84110 TSC_hg19_v1_chr8_+_30242056 BC003608	2076	+	NM_001206847	256183	+	S67861 TSC_hg19_v1_chr8_-_30515718 X63469 BC030572 BC001775 NM_002095	275803	-	D84145|DCTN6|10671|dynactin 6##NM_006571|DCTN6|10671|dynactin 6##AK314128|DCTN6|10671|dynactin 6##BC013175|DCTN6|10671|dynactin 6##CR456851|DCTN6|10671|dynactin 6##NM_001100916|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##EU518495|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing##NM_006867|RBPMS|11030|RNA binding protein with multiple splicing##AK304858|RBPMS|11030|RNA binding protein with multiple splicing##D84107|RBPMS|11030|RNA binding protein with multiple splicing##D84108|RBPMS|11030|RNA binding protein with multiple splicing##D84109|RBPMS|11030|RNA binding protein with multiple splicing##D84110|RBPMS|11030|RNA binding protein with multiple splicing##BC003608|RBPMS|11030|RNA binding protein with multiple splicing##NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341##S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa	0.837305	CTCF.p2:19:0.837
chr14	69310785	69310910	reg1009346.p1	11.476	+	NM_001244701 AB528867	-47863	-	NM_001244698 NM_004926	-50217	-	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	-51127	-	TSC_hg19_v1_chr14_-_69354901 BX641076	44092	-	BX248020 AK299362 TSC_hg19_v1_chr14_-_69444987	134139	-	BT007207 AB590251 DQ890778 DQ895768 EU716325 FJ410030 TSC_hg19_v1_chr14_-_69445830 M95178 BC015766	134983	-	NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BX641076|ACTN1|87|actinin, alpha 1##BX248020|ACTN1|87|actinin, alpha 1##AK299362|ACTN1|87|actinin, alpha 1##BT007207|ACTN1|87|actinin, alpha 1##DQ890778|ACTN1|87|actinin, alpha 1##DQ895768|ACTN1|87|actinin, alpha 1##EU716325|ACTN1|87|actinin, alpha 1##FJ410030|ACTN1|87|actinin, alpha 1##M95178|ACTN1|87|actinin, alpha 1##BC015766|ACTN1|87|actinin, alpha 1	0.993653	CTCF.p2:3:0.994
chr16	14343515	14343634	reg1007856.p1	11.476	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-49376	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-63056	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-178488	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	380454	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	380559	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	383165	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.99363	CTCF.p2:2:0.994
chr3	42785874	42785987	reg1006162.p1	11.476	+	NM_020707	-41612	-	AY176040 AY177390 NM_152393 AK056577 AK291294 AK300682 TSC_hg19_v1_chr3_+_42727028 BC110491	-58904	+	TSC_hg19_v1_chr3_+_42704598 AB033016	-81332	+	AK302859 BC036050 AK058196 NM_144719	28809	-	TSC_hg19_v1_chr3_-_42843217 BC061594	57333	-	TSC_hg19_v1_chr3_-_42845935 NM_001099668	59993	-	NM_020707|HHATL|57467|hedgehog acyltransferase-like##AY176040|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AY177390|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##NM_152393|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AK056577|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AK291294|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AK300682|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##BC110491|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AB033016|ZBTB47|92999|zinc finger and BTB domain containing 47##AK302859|CCDC13|152206|coiled-coil domain containing 13##BC036050|CCDC13|152206|coiled-coil domain containing 13##AK058196|CCDC13|152206|coiled-coil domain containing 13##NM_144719|CCDC13|152206|coiled-coil domain containing 13##NM_001099668|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A	0.276853	CTCF.p2:15:0.277
chr3	52265650	52265783	reg1010022.p1	11.476	+	AF259262 NM_017442	-5538	-	TSC_hg19_v1_chr3_+_52232180 BC011798 BC063005 Y00451 X56351	-33513	+	TSC_hg19_v1_chr3_+_52232177 AK293190	-33541	+	CR456732 CR533520 CU678412 AM392602 DQ891754 DQ894936 AB385234 AF109365 TSC_hg19_v1_chr3_-_52273109 BC003161 BC000327 Y17169	7368	-	TSC_hg19_v1_chr3_-_52273175 AL136773 BC016452 BC021003 NM_007284	7446	-	TSC_hg19_v1_chr3_+_52273270 BC039681	7547	+	AF259262|TLR9|54106|toll-like receptor 9##NM_017442|TLR9|54106|toll-like receptor 9##BC011798|ALAS1|211|aminolevulinate, delta-, synthase 1##Y00451|ALAS1|211|aminolevulinate, delta-, synthase 1##X56351|ALAS1|211|aminolevulinate, delta-, synthase 1##AK293190|ALAS1|211|aminolevulinate, delta-, synthase 1##CR456732|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##CR533520|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##DQ891754|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##DQ894936|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##AF109365|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##BC003161|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##BC000327|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##Y17169|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##AL136773|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##BC016452|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##NM_007284|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	0.978841	CTCF.p2:-2:0.979
chr4	104707341	104707453	reg1009190.p1	11.476	+	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-66497	-	AB527246 AB209996 TSC_hg19_v1_chr4_-_104119535 AK290362 NM_001813 Z15005	-587877	-	AK128463 TSC_hg19_v1_chr4_-_104020987 AF164790 AK023323 AK290160 AK291335 AK300626 BC037277 BC095414 AY358841 BC001953 NM_020139	-686397	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	705085	-	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	708656	-	BX640738 NM_017628	1359634	+	BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##AB209996|CENPE|1062|centromere protein E, 312kDa##AK290362|CENPE|1062|centromere protein E, 312kDa##NM_001813|CENPE|1062|centromere protein E, 312kDa##Z15005|CENPE|1062|centromere protein E, 312kDa##AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##AK127778|CXXC4|80319|CXXC finger protein 4##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2	0.996387	CTCF.p2:8:0.996
chr4	40739051	40739187	reg1008972.p1	11.476	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-106412	-	TSC_hg19_v1_chr4_-_40631882 BC034402 BC071585 NM_001098634	-107254	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	-221161	-	BC042401 NM_024677 BC036568 AK024063	12827	+	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	120056	-	BC088372 TSC_hg19_v1_chr4_-_40936716	197559	-	AK304206|RBM47|54502|RNA binding motif protein 47##BC034402|RBM47|54502|RNA binding motif protein 47##BC071585|RBM47|54502|RNA binding motif protein 47##NM_001098634|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	0.985982	CTCF.p2:-10:0.986
chr13	27948914	27949043	reg1008049.p1	11.475	+	TSC_hg19_v1_chr13_+_27844966 HQ258126	-103971	+	AY439004 NM_206827	-104515	+	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	-123236	+	BC143711 D32257 NM_002097 TSC_hg19_v1_chr13_+_27998761 AB590496 U14134 U20272	49793	+	TSC_hg19_v1_chr13_-_28024327 BC039599 NM_001166262 NM_001166261	75331	-	AF265440 TSC_hg19_v1_chr13_-_28024702 BC046166 NM_001166263 NM_152912	75744	-	HQ258126|RASL11A|387496|RAS-like, family 11, member A##AY439004|RASL11A|387496|RAS-like, family 11, member A##NM_206827|RASL11A|387496|RAS-like, family 11, member A##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21##BC143711|GTF3A|2971|general transcription factor IIIA##D32257|GTF3A|2971|general transcription factor IIIA##NM_002097|GTF3A|2971|general transcription factor IIIA##U14134|GTF3A|2971|general transcription factor IIIA##U20272|GTF3A|2971|general transcription factor IIIA##BC039599|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166262|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166261|MTIF3|219402|mitochondrial translational initiation factor 3##BC046166|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166263|MTIF3|219402|mitochondrial translational initiation factor 3##NM_152912|MTIF3|219402|mitochondrial translational initiation factor 3	0.211026	CTCF.p2:-18:0.211
chr5	131862577	131862707	reg1004209.p2	11.475	+	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	-36161	-	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-116014	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-157134	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	16550	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	29998	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	131248	+	X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13	0.994067	CTCF.p2:-9:0.994
chr10	101605696	101605843	reg1010042.p1	11.474	+	TSC_hg19_v1_chr10_+_101542570 X96395 BC136419 U63970	-63206	+	TSC_hg19_v1_chr10_+_101542477 NM_000392 U49248 U66683	-63274	+	BX537557 NM_004376 NM_078470	-113347	-	BC020878 TSC_hg19_v1_chr10_-_101690657 AK128576	84934	-	TSC_hg19_v1_chr10_-_101769671 AL833283 NM_015221	163892	-	X14329 BC027897 NM_001308 AK313972	235856	-	X96395|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##BC136419|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U63970|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##NM_000392|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U49248|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U66683|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##BX537557|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##NM_004376|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##NM_078470|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AK128576|DNMBP|23268|dynamin binding protein##AL833283|DNMBP|23268|dynamin binding protein##NM_015221|DNMBP|23268|dynamin binding protein##X14329|CPN1|1369|carboxypeptidase N, polypeptide 1##BC027897|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_001308|CPN1|1369|carboxypeptidase N, polypeptide 1##AK313972|CPN1|1369|carboxypeptidase N, polypeptide 1	0.999812	CTCF.p2:-15:1.000
chr10	104159378	104159515	reg1010204.p1	11.472	+	NM_002502 X61498 X61499 TSC_hg19_v1_chr10_+_104155501 AK292654	-3975	+	NM_001077493 TSC_hg19_v1_chr10_+_104154290 BC002844 NM_001077494 S76638	-5156	+	TSC_hg19_v1_chr10_+_104005308 AF068755 D87435 BC117681 BC117682	-154079	+	TSC_hg19_v1_chr10_-_104178575 BC037332	19126	-	AB095931 NM_002779 TSC_hg19_v1_chr10_-_104178917	19462	-	BC039259 TSC_hg19_v1_chr10_-_104179472 AF452641	20025	-	NM_002502|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61498|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61499|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##AK292654|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_001077493|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC002844|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_001077494|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##S76638|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC037332|PSD|5662|pleckstrin and Sec7 domain containing##AB095931|PSD|5662|pleckstrin and Sec7 domain containing##NM_002779|PSD|5662|pleckstrin and Sec7 domain containing##BC039259|PSD|5662|pleckstrin and Sec7 domain containing##AF452641|PSD|5662|pleckstrin and Sec7 domain containing	0.984904	CTCF.p2:-1:0.985
chr1	120351705	120351854	reg1008450.p1	11.471	+	CR456850 BC044217 X83618 AK301594 AK313590 TSC_hg19_v1_chr1_-_120311529 AK302276 AK303777 NM_001166107 NM_005518	-40269	-	NM_006623 AK315360 BC011262 TSC_hg19_v1_chr1_+_120254558 AK309662 AK310132 AF171237 BC000303 BC001349 BC023235 DQ892073 EU176546 AB528378 CR456795	-97248	+	NM_001080470	-161390	-	AY007243 AF345934 BC017089 TSC_hg19_v1_chr1_-_120354084 AF254415 AY126670 AY126671 AY126672 NM_001159352 NM_001159353 NM_032044	2351	-	NM_001047980	35999	-	BC028372 AY358734 AK292483 NM_021794	87352	-	CR456850|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##BC044217|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##X83618|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK301594|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK313590|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK302276|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK303777|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_001166107|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_005518|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase##AK315360|PHGDH|26227|phosphoglycerate dehydrogenase##BC011262|PHGDH|26227|phosphoglycerate dehydrogenase##AK309662|PHGDH|26227|phosphoglycerate dehydrogenase##AK310132|PHGDH|26227|phosphoglycerate dehydrogenase##AF171237|PHGDH|26227|phosphoglycerate dehydrogenase##BC000303|PHGDH|26227|phosphoglycerate dehydrogenase##BC001349|PHGDH|26227|phosphoglycerate dehydrogenase##BC023235|PHGDH|26227|phosphoglycerate dehydrogenase##DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase##EU176546|PHGDH|26227|phosphoglycerate dehydrogenase##CR456795|PHGDH|26227|phosphoglycerate dehydrogenase##NM_001080470|ZNF697|90874|zinc finger protein 697##AY007243|REG4|83998|regenerating islet-derived family, member 4##AF345934|REG4|83998|regenerating islet-derived family, member 4##BC017089|REG4|83998|regenerating islet-derived family, member 4##AF254415|REG4|83998|regenerating islet-derived family, member 4##AY126670|REG4|83998|regenerating islet-derived family, member 4##AY126671|REG4|83998|regenerating islet-derived family, member 4##AY126672|REG4|83998|regenerating islet-derived family, member 4##NM_001159352|REG4|83998|regenerating islet-derived family, member 4##NM_001159353|REG4|83998|regenerating islet-derived family, member 4##NM_032044|REG4|83998|regenerating islet-derived family, member 4##NM_001047980|NBPF7|343505|neuroblastoma breakpoint family, member 7##BC028372|ADAM30|11085|ADAM metallopeptidase domain 30##AY358734|ADAM30|11085|ADAM metallopeptidase domain 30##AK292483|ADAM30|11085|ADAM metallopeptidase domain 30##NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30	0.999336	CTCF.p2:-2:0.999
chr12	64237744	64237888	reg1009731.p1	11.471	+	TSC_hg19_v1_chr12_+_64237847 BC065032	-90	+	BX647105 BX647419 TSC_hg19_v1_chr12_+_64173925	-63881	+	TSC_hg19_v1_chr12_+_64173629 AB015633 NM_014254 BC013152 BC002596 AK289382 CU680528 DQ891077 DQ894259	-64149	+	TSC_hg19_v1_chr12_+_64238511 BC053903 NM_020762 BC029919	730	+	BC071634 AK057111 BC036246 AK129933 NM_152440	378237	-	BC039369 NM_001099676 NM_001170633	546501	-	BX647105|TMEM5|10329|transmembrane protein 5##BX647419|TMEM5|10329|transmembrane protein 5##AB015633|TMEM5|10329|transmembrane protein 5##NM_014254|TMEM5|10329|transmembrane protein 5##BC013152|TMEM5|10329|transmembrane protein 5##BC002596|TMEM5|10329|transmembrane protein 5##AK289382|TMEM5|10329|transmembrane protein 5##DQ891077|TMEM5|10329|transmembrane protein 5##DQ894259|TMEM5|10329|transmembrane protein 5##BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC071634|C12orf66|144577|chromosome 12 open reading frame 66##AK057111|C12orf66|144577|chromosome 12 open reading frame 66##BC036246|C12orf66|144577|chromosome 12 open reading frame 66##AK129933|C12orf66|144577|chromosome 12 open reading frame 66##NM_152440|C12orf66|144577|chromosome 12 open reading frame 66##BC039369|C12orf56|115749|chromosome 12 open reading frame 56##NM_001099676|C12orf56|115749|chromosome 12 open reading frame 56##NM_001170633|C12orf56|115749|chromosome 12 open reading frame 56	0.971012	CTCF.p2:-9:0.971
chr13	34116909	34117026	reg1007416.p1	11.471	+	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	-192199	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	-257100	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-336803	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	133968	-	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	275260	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	275317	+	AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa	0.930512	CTCF.p2:3:0.931
chr7	18360741	18360853	reg1009558.p1	11.471	+	AK097178 TSC_hg19_v1_chr7_+_18330071	-30738	+	TSC_hg19_v1_chr7_+_18126583 AK304298 NM_001204144	-234206	+	BC062797 BC005309 M57423 NM_175886	-293332	-	TSC_hg19_v1_chr7_+_18535361 BC092441 BC150328 AB018287 AJ459808 BC152405 NM_001204145 NM_001204146 NM_014707 NM_178423 AK297404 AK316109 AY429540	174602	+	CR749550 EU832154 EU832248 TSC_hg19_v1_chr7_+_18535882 NM_058176 NM_178425 AB385379 AY032737 AY032738 AY197371 EU832247 BC111735	175074	+	NM_001204147 NM_001204148 TSC_hg19_v1_chr7_+_18548932 AK304410	188126	+	AK097178|HDAC9|9734|histone deacetylase 9##AK304298|HDAC9|9734|histone deacetylase 9##NM_001204144|HDAC9|9734|histone deacetylase 9##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC150328|HDAC9|9734|histone deacetylase 9##AB018287|HDAC9|9734|histone deacetylase 9##AJ459808|HDAC9|9734|histone deacetylase 9##BC152405|HDAC9|9734|histone deacetylase 9##NM_001204145|HDAC9|9734|histone deacetylase 9##NM_001204146|HDAC9|9734|histone deacetylase 9##NM_014707|HDAC9|9734|histone deacetylase 9##NM_178423|HDAC9|9734|histone deacetylase 9##AK297404|HDAC9|9734|histone deacetylase 9##AK316109|HDAC9|9734|histone deacetylase 9##AY429540|HDAC9|9734|histone deacetylase 9##CR749550|HDAC9|9734|histone deacetylase 9##EU832154|HDAC9|9734|histone deacetylase 9##EU832248|HDAC9|9734|histone deacetylase 9##NM_058176|HDAC9|9734|histone deacetylase 9##NM_178425|HDAC9|9734|histone deacetylase 9##AY032737|HDAC9|9734|histone deacetylase 9##AY032738|HDAC9|9734|histone deacetylase 9##AY197371|HDAC9|9734|histone deacetylase 9##EU832247|HDAC9|9734|histone deacetylase 9##BC111735|HDAC9|9734|histone deacetylase 9##NM_001204147|HDAC9|9734|histone deacetylase 9##NM_001204148|HDAC9|9734|histone deacetylase 9##AK304410|HDAC9|9734|histone deacetylase 9	0.015426	
chr3	184089458	184089567	reg1008280.p1	11.470	+	TSC_hg19_v1_chr3_+_184081196 NM_006232 Z49199 BC000739 AB464044 EU446997	-8283	+	AF026004 TSC_hg19_v1_chr3_-_184079266 AK302389 BC072004 AK298952 AK302759 NM_001171087 NM_001171088 NM_001171089 NM_004366	-10184	-	BC026221 TSC_hg19_v1_chr3_+_184056421	-33150	+	BC130322 BC136338 BC143982 L33410 NM_000460 NM_001177597 NM_001177598 TSC_hg19_v1_chr3_-_184095936	6426	-	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	8528	+	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	190070	+	NM_006232|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##Z49199|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##BC000739|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##EU446997|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##AF026004|CLCN2|1181|chloride channel 2##AK302389|CLCN2|1181|chloride channel 2##BC072004|CLCN2|1181|chloride channel 2##AK298952|CLCN2|1181|chloride channel 2##AK302759|CLCN2|1181|chloride channel 2##NM_001171087|CLCN2|1181|chloride channel 2##NM_001171088|CLCN2|1181|chloride channel 2##NM_001171089|CLCN2|1181|chloride channel 2##NM_004366|CLCN2|1181|chloride channel 2##BC026221|FAM131A|131408|family with sequence similarity 131, member A##BC130322|THPO|7066|thrombopoietin##BC136338|THPO|7066|thrombopoietin##BC143982|THPO|7066|thrombopoietin##L33410|THPO|7066|thrombopoietin##NM_000460|THPO|7066|thrombopoietin##NM_001177597|THPO|7066|thrombopoietin##NM_001177598|THPO|7066|thrombopoietin##AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3	0.294919	CTCF.p2:-3:0.295
chr3	42581490	42581643	reg1009552.p1	11.470	+	TSC_hg19_v1_chr3_+_42544134 AK298115 AK314334 L13288 BC064424 X75299 AB590664 EF577396	-37387	+	TSC_hg19_v1_chr3_+_42544108 AK294609 NM_001251883 NM_001251884 NM_001251885 NM_004624 AK293548	-37459	+	AK056819 NM_001251882	-50776	+	TSC_hg19_v1_chr3_-_42623460 BC006178 BC018437 AY359041 AK292856 AK293133 AK074576 NM_001201584 NM_004206 NM_032970	41895	-	NM_016305 AF201950 TSC_hg19_v1_chr3_+_42632337	50751	+	TSC_hg19_v1_chr3_+_42632351 BC017804 AK312225 DQ891965 EU176663 BC020444	50813	+	AK298115|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK314334|VIPR1|7433|vasoactive intestinal peptide receptor 1##L13288|VIPR1|7433|vasoactive intestinal peptide receptor 1##BC064424|VIPR1|7433|vasoactive intestinal peptide receptor 1##X75299|VIPR1|7433|vasoactive intestinal peptide receptor 1##EF577396|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK294609|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251883|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251884|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251885|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_004624|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK293548|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK056819|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251882|VIPR1|7433|vasoactive intestinal peptide receptor 1##BC006178|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##BC018437|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AY359041|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK292856|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK293133|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK074576|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_001201584|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_004206|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_032970|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_016305|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##AF201950|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##BC017804|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##AK312225|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##DQ891965|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##EU176663|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##BC020444|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2	0.996591	CTCF.p2:2:0.997
chr6	787090	787211	reg1008014.p2	11.470	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-94060	-	AF508547 BC101697 BC101699 NM_148959	-130197	-	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-395386	+	BC053850 NM_033260	525524	+	NM_001452 U13220 AB463646	602975	+	BC134421 NM_001453	823530	+	AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1	0.636941	CTCF.p2:1:0.637
chr6	87849094	87849229	reg1009942.p1	11.470	+	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	-44343	-	NM_000865	-202138	+	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	-1460724	-	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	16128	+	TSC_hg19_v1_chr6_+_87964930 AL832366	115819	+	BC016386 TSC_hg19_v1_chr6_+_87967437	118274	+	V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292##AL832366|ZNF292|23036|zinc finger protein 292##BC016386|ZNF292|23036|zinc finger protein 292	0.535639	CTCF.p2:-8:0.536
chr9	176192	176345	reg1009845.p1	11.470	+	BC089432 NM_207305	-57852	-	AK289708 NM_182905	-146530	-	None	None	None	AY295766 CU675219 HQ258394 AK315855 BC132759 AK297292 TSC_hg19_v1_chr9_-_179017 AY320414 BC009573 AF257330 AY343911 BC013432 AK290648 BC005996 NM_001145355 NM_001145356 NM_018491	2725	-	TSC_hg19_v1_chr9_+_214847 BC043265	38563	+	TSC_hg19_v1_chr9_+_214864 AB191037 NM_203447	38594	+	BC089432|FOXD4|2298|forkhead box D4##NM_207305|FOXD4|2298|forkhead box D4##AK289708|WASH1|100287171|WAS protein family homolog 1##NM_182905|WASH1|100287171|WAS protein family homolog 1##AY295766|CBWD1|55871|COBW domain containing 1##HQ258394|CBWD1|55871|COBW domain containing 1##AK315855|CBWD1|55871|COBW domain containing 1##BC132759|CBWD1|55871|COBW domain containing 1##AK297292|CBWD1|55871|COBW domain containing 1##AY320414|CBWD1|55871|COBW domain containing 1##BC009573|CBWD1|55871|COBW domain containing 1##AF257330|CBWD1|55871|COBW domain containing 1##AY343911|CBWD1|55871|COBW domain containing 1##BC013432|CBWD1|55871|COBW domain containing 1##AK290648|CBWD1|55871|COBW domain containing 1##BC005996|CBWD1|55871|COBW domain containing 1##NM_001145355|CBWD1|55871|COBW domain containing 1##NM_001145356|CBWD1|55871|COBW domain containing 1##NM_018491|CBWD1|55871|COBW domain containing 1##BC043265|DOCK8|81704|dedicator of cytokinesis 8##AB191037|DOCK8|81704|dedicator of cytokinesis 8##NM_203447|DOCK8|81704|dedicator of cytokinesis 8	0.584332	CTCF.p2:-14:0.584
chr3	190102126	190102293	reg1007090.p1	11.469	+	BC012471 AF114837 AY358652 AF101051 AF134160 AK312866 AK225963 AK296934 TSC_hg19_v1_chr3_-_190040231 NM_021101	-61995	-	NM_001134418	-261984	-	NM_018192	-263302	-	AK314955 NM_006580	3451	+	CU687168 BC071780 AY358607 NM_207316	65421	-	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	129668	+	BC012471|CLDN1|9076|claudin 1##AF114837|CLDN1|9076|claudin 1##AY358652|CLDN1|9076|claudin 1##AF101051|CLDN1|9076|claudin 1##AF134160|CLDN1|9076|claudin 1##AK312866|CLDN1|9076|claudin 1##AK296934|CLDN1|9076|claudin 1##NM_021101|CLDN1|9076|claudin 1##NM_001134418|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##AK314955|CLDN16|10686|claudin 16##NM_006580|CLDN16|10686|claudin 16##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207##NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein	1.135964	CTCF.p2:-21:0.791
chr1	86846073	86846223	reg1007094.p1	11.468	+	BC116180 BC113654 BC117170 BC143715 BC143717 BC143718 AY244357 NM_152890	-224035	-	TSC_hg19_v1_chr1_-_86174088 AL442074 BC026236 AK298149 NM_001170670 NM_017953	-672035	-	EU446811 AK000767 TSC_hg19_v1_chr1_-_86174035 BC110898 AK314566	-672142	-	BC091490 TSC_hg19_v1_chr1_-_86862004 AB033055 BC047368 BC009779 BC012579 AK308351 AK302792 BC026105 AK303209 NM_001007022 NM_001184765 NM_001184766 NM_020729	15827	-	NM_006536 AF043977 AK296719 AK290348 AK307937 BC041096 AB026833 AF127980	43701	+	NM_001285 TSC_hg19_v1_chr1_+_86934607 AK314375 AK291999 AK097057 AF127036	88439	+	BC116180|COL24A1|255631|collagen, type XXIV, alpha 1##BC113654|COL24A1|255631|collagen, type XXIV, alpha 1##BC117170|COL24A1|255631|collagen, type XXIV, alpha 1##BC143715|COL24A1|255631|collagen, type XXIV, alpha 1##BC143717|COL24A1|255631|collagen, type XXIV, alpha 1##BC143718|COL24A1|255631|collagen, type XXIV, alpha 1##AY244357|COL24A1|255631|collagen, type XXIV, alpha 1##NM_152890|COL24A1|255631|collagen, type XXIV, alpha 1##AL442074|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC026236|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK298149|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_001170670|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_017953|ZNHIT6|54680|zinc finger, HIT-type containing 6##EU446811|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK000767|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC110898|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK314566|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC091490|ODF2L|57489|outer dense fiber of sperm tails 2-like##AB033055|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC047368|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC009779|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC012579|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK308351|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK302792|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC026105|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK303209|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001007022|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184765|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184766|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_020729|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_006536|CLCA2|9635|chloride channel accessory 2##AF043977|CLCA2|9635|chloride channel accessory 2##AK290348|CLCA2|9635|chloride channel accessory 2##AK307937|CLCA2|9635|chloride channel accessory 2##BC041096|CLCA2|9635|chloride channel accessory 2##AB026833|CLCA2|9635|chloride channel accessory 2##AF127980|CLCA2|9635|chloride channel accessory 2##NM_001285|CLCA1|1179|chloride channel accessory 1##AK314375|CLCA1|1179|chloride channel accessory 1##AK291999|CLCA1|1179|chloride channel accessory 1##AK097057|CLCA1|1179|chloride channel accessory 1##AF127036|CLCA1|1179|chloride channel accessory 1	0.0	
chr7	22143464	22143584	reg1007776.p2	11.468	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-158042	-	AJ320497 NM_003777	-560692	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-675200	+	AL833195 NM_012294	252997	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	396323	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	623299	+	AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)	0.997901	CTCF.p2:-7:0.998
chr1	235578765	235578890	reg1007063.p2	11.467	+	TSC_hg19_v1_chr1_+_235530768 AK093397 AK292287 BC008654	-48055	+	NM_001079515 NM_003193 TSC_hg19_v1_chr1_+_235530744 AK296185 AK298050	-48084	+	AK309831 TSC_hg19_v1_chr1_+_235492306	-86532	+	TSC_hg19_v1_chr1_-_235667473 AK091497	88682	-	TSC_hg19_v1_chr1_-_235667723 BC016974 AK130297	88906	-	BC029564 NM_152490 TSC_hg19_v1_chr1_-_235667782	88954	-	AK093397|TBCE|6905|tubulin folding cofactor E##AK292287|TBCE|6905|tubulin folding cofactor E##BC008654|TBCE|6905|tubulin folding cofactor E##NM_001079515|TBCE|6905|tubulin folding cofactor E##NM_003193|TBCE|6905|tubulin folding cofactor E##AK296185|TBCE|6905|tubulin folding cofactor E##AK298050|TBCE|6905|tubulin folding cofactor E##AK091497|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##BC016974|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##AK130297|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##BC029564|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_152490|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2	0.167075	
chr5	173744402	173744513	reg1008081.p2	11.467	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-271705	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	-271746	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	-328267	+	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	407155	+	NM_000794	1126705	-	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	1161105	+	AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##NM_000794|DRD1|1812|dopamine receptor D1##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1	0.214441	
chr11	2218579	2218695	reg1007739.p1	11.466	+	M20911 M20912 AB591012 DQ677336 DQ677337 M17589 Y00414 M24790 NM_000360 NM_199292 NM_199293 X05290 BC143611 BC104967 BC143614	-25577	-	AY899304 X70508 BC005255 DQ104204 DQ104205 NM_000207 NM_001042376 NM_001185097 NM_001185098	-36214	-	TSC_hg19_v1_chr11_-_2170792 DQ104203 NM_001007139	-47825	-	TSC_hg19_v1_chr11_-_2291819 BC057801 BC136561 BC136567	73220	-	BC028140 NM_005170 TSC_hg19_v1_chr11_-_2292209	73558	-	TSC_hg19_v1_chr11_-_2323122 AK290921 BC028070 AK310172 NM_001142946 AB029488	104540	-	M20911|TH|7054|tyrosine hydroxylase##M20912|TH|7054|tyrosine hydroxylase##DQ677336|TH|7054|tyrosine hydroxylase##DQ677337|TH|7054|tyrosine hydroxylase##M17589|TH|7054|tyrosine hydroxylase##Y00414|TH|7054|tyrosine hydroxylase##M24790|TH|7054|tyrosine hydroxylase##NM_000360|TH|7054|tyrosine hydroxylase##NM_199292|TH|7054|tyrosine hydroxylase##NM_199293|TH|7054|tyrosine hydroxylase##X05290|TH|7054|tyrosine hydroxylase##BC143611|TH|7054|tyrosine hydroxylase##BC104967|TH|7054|tyrosine hydroxylase##BC143614|TH|7054|tyrosine hydroxylase##AY899304|INS|3630|insulin##X70508|INS|3630|insulin##BC005255|INS|3630|insulin##DQ104204|INS-IGF2|723961|INS-IGF2 readthrough##DQ104205|INS-IGF2|723961|INS-IGF2 readthrough##NM_000207|INS|3630|insulin##NM_001042376|INS-IGF2|723961|INS-IGF2 readthrough##NM_001185097|INS|3630|insulin##NM_001185098|INS|3630|insulin##DQ104203|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##NM_001007139|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##BC057801|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136561|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136567|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC028140|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##NM_005170|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##AK290921|C11orf21|29125|chromosome 11 open reading frame 21##BC028070|C11orf21|29125|chromosome 11 open reading frame 21##AK310172|C11orf21|29125|chromosome 11 open reading frame 21##NM_001142946|C11orf21|29125|chromosome 11 open reading frame 21##AB029488|C11orf21|29125|chromosome 11 open reading frame 21	0.013508	
chr12	67749746	67749892	reg1007609.p2	11.466	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-86389	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-86647	+	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	-86717	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	292804	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	803603	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	869733	-	BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26	0.903733	CTCF.p2:-11:0.904
chr1	32879660	32879781	reg1008053.p1	11.466	+	CR457252 TSC_hg19_v1_chr1_-_32860030 BC010573 CR749228 BX641056 AK300231 BC026322 AK297604 AK300306 AK001138 AK225717 AK293454 BC028381 AK021440 AK297352 AK225026 AK304477 AK316172 NM_001143888 NM_001143889 NM_001143890 NM_018045	-19683	-	NM_001167676	-51877	-	BC035354 NM_052841	-51891	+	TSC_hg19_v1_chr1_+_32930659 AK092326 AX747483 NM_001145720	50932	+	NM_001040441	125051	+	TSC_hg19_v1_chr1_+_33005058 AK074546 AY157873 BC015239	125324	+	CR457252|BSDC1|55108|BSD domain containing 1##BC010573|BSDC1|55108|BSD domain containing 1##CR749228|BSDC1|55108|BSD domain containing 1##BX641056|BSDC1|55108|BSD domain containing 1##AK300231|BSDC1|55108|BSD domain containing 1##BC026322|BSDC1|55108|BSD domain containing 1##AK297604|BSDC1|55108|BSD domain containing 1##AK300306|BSDC1|55108|BSD domain containing 1##AK001138|BSDC1|55108|BSD domain containing 1##AK225717|BSDC1|55108|BSD domain containing 1##AK293454|BSDC1|55108|BSD domain containing 1##BC028381|BSDC1|55108|BSD domain containing 1##AK021440|BSDC1|55108|BSD domain containing 1##AK297352|BSDC1|55108|BSD domain containing 1##AK225026|BSDC1|55108|BSD domain containing 1##AK304477|BSDC1|55108|BSD domain containing 1##AK316172|BSDC1|55108|BSD domain containing 1##NM_001143888|BSDC1|55108|BSD domain containing 1##NM_001143889|BSDC1|55108|BSD domain containing 1##NM_001143890|BSDC1|55108|BSD domain containing 1##NM_018045|BSDC1|55108|BSD domain containing 1##NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##NM_001145720|ZBTB8B|728116|zinc finger and BTB domain containing 8B##NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A##AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A##AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A##BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A	0.995135	CTCF.p2:20:0.995
chr14	100844288	100844403	reg1002950.p1	11.466	+	TSC_hg19_v1_chr14_+_100842812 NM_001161476 BX248767 AK291960 NM_024515 BC067872 AY295082	-1507	+	TSC_hg19_v1_chr14_-_100842681 NM_173701 NM_213645	-1665	-	TSC_hg19_v1_chr14_-_100842665 AK291141	-1692	-	AB527893 CU678064 EU832622 EU832695 NM_001159531	189988	-	BC002607 NM_020836	191785	-	TSC_hg19_v1_chr14_+_101193228 NM_003836 AK289384 AK297918 AK313258 BC007741 BC014015	348878	+	NM_001161476|WDR25|79446|WD repeat domain 25##BX248767|WDR25|79446|WD repeat domain 25##AK291960|WDR25|79446|WD repeat domain 25##NM_024515|WDR25|79446|WD repeat domain 25##BC067872|WDR25|79446|WD repeat domain 25##AY295082|WDR25|79446|WD repeat domain 25##NM_173701|WARS|7453|tryptophanyl-tRNA synthetase##NM_213645|WARS|7453|tryptophanyl-tRNA synthetase##AK291141|WARS|7453|tryptophanyl-tRNA synthetase##EU832622|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832695|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001159531|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##BC002607|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_020836|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_003836|DLK1|8788|delta-like 1 homolog (Drosophila)##AK289384|DLK1|8788|delta-like 1 homolog (Drosophila)##AK297918|DLK1|8788|delta-like 1 homolog (Drosophila)##AK313258|DLK1|8788|delta-like 1 homolog (Drosophila)##BC007741|DLK1|8788|delta-like 1 homolog (Drosophila)##BC014015|DLK1|8788|delta-like 1 homolog (Drosophila)	0.963162	CTCF.p2:15:0.932
chr14	45996630	45996742	reg1008741.p1	11.465	+	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-274040	-	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	-274319	-	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-391497	+	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	1124297	-	BC028193 NM_182830	1815729	-	AK309211 NM_001113498	2147470	-	AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	0.244107	CTCF.p2:1:0.244
chr14	69709435	69709576	reg1007379.p1	11.465	+	AK292563 NM_001193362 NM_001193363 AK295601 BX161412	-50989	+	TSC_hg19_v1_chr14_+_69658227 CR936729 BX647767 CR936728 AK056025 AL834434	-51253	+	NM_001193360 NM_001193361 NM_018199 TSC_hg19_v1_chr14_+_69658214	-51302	+	NM_001168368 NM_020692	17175	+	AK299588 TSC_hg19_v1_chr14_+_69726876 AB032956 BC122545 BC098578 AK315848 AK289745 BC036812 AB384119 AB078143 AJ505951	17432	+	BC071709 TSC_hg19_v1_chr14_-_69865012 BC014301 AK130850 AK312186 D85758 NM_004450 U66871	155498	-	AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2##AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2##BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2##CR936729|EXD2|55218|exonuclease 3'-5' domain containing 2##BX647767|EXD2|55218|exonuclease 3'-5' domain containing 2##CR936728|EXD2|55218|exonuclease 3'-5' domain containing 2##AK056025|EXD2|55218|exonuclease 3'-5' domain containing 2##AL834434|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001193360|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001193361|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_018199|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001168368|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##NM_020692|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK299588|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AB032956|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC122545|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC098578|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK315848|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK289745|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC036812|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AB078143|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AJ505951|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC071709|ERH|2079|enhancer of rudimentary homolog (Drosophila)##BC014301|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK130850|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK312186|ERH|2079|enhancer of rudimentary homolog (Drosophila)##D85758|ERH|2079|enhancer of rudimentary homolog (Drosophila)##NM_004450|ERH|2079|enhancer of rudimentary homolog (Drosophila)##U66871|ERH|2079|enhancer of rudimentary homolog (Drosophila)	0.999366	CTCF.p2:-4:0.999
chr17	6908210	6908342	reg1006740.p2	11.465	+	M62982 NM_000697 M35418 M58704 BC069557 AB590844	-8869	+	AF357879 AK292818 AK304345 BC014599 NM_053285	-173243	-	NM_153230 BC034782	-228715	+	NM_001004333	7459	+	AK289930 TSC_hg19_v1_chr17_+_6915955 BC036317 BC051802 BC062705 BC095436 AM746459	7684	+	TSC_hg19_v1_chr17_+_6915973 BC040148	7699	+	M62982|ALOX12|239|arachidonate 12-lipoxygenase##NM_000697|ALOX12|239|arachidonate 12-lipoxygenase##M35418|ALOX12|239|arachidonate 12-lipoxygenase##M58704|ALOX12|239|arachidonate 12-lipoxygenase##BC069557|ALOX12|239|arachidonate 12-lipoxygenase##AF357879|TEKT1|83659|tektin 1##AK292818|TEKT1|83659|tektin 1##AK304345|TEKT1|83659|tektin 1##BC014599|TEKT1|83659|tektin 1##NM_053285|TEKT1|83659|tektin 1##NM_153230|FBXO39|162517|F-box protein 39##BC034782|FBXO39|162517|F-box protein 39##NM_001004333|RNASEK|440400|ribonuclease, RNase K##AK289930|RNASEK|440400|ribonuclease, RNase K##BC036317|RNASEK|440400|ribonuclease, RNase K##BC051802|RNASEK|440400|ribonuclease, RNase K##BC062705|RNASEK|440400|ribonuclease, RNase K##BC095436|RNASEK|440400|ribonuclease, RNase K##AM746459|RNASEK|440400|ribonuclease, RNase K##BC040148|RNASEK-C17ORF49|100529209|RNASEK-C17orf49 readthrough	0.91319	CTCF.p2:23:0.913
chr20	61422901	61423057	reg1007334.p1	11.465	+	TSC_hg19_v1_chr20_+_61340165 NM_002531 X70070	-82803	+	TSC_hg19_v1_chr20_+_61273854 BC015727 AK023410 AF205072 AF104334	-149132	+	TSC_hg19_v1_chr20_+_61273818 NM_016354	-149176	+	AK001776 NM_018270 TSC_hg19_v1_chr20_+_61427832 BC014235 BC009889 BC018841 AB085682 AB463516	4868	+	TSC_hg19_v1_chr20_+_61436186 NM_007346 AK314696 AK022234 AF109134 BC008768 BC014137 CU680798 DQ892943 EU176723 BC032666	13214	+	TSC_hg19_v1_chr20_+_61448401 BC011705 NM_001853 DQ892946 DQ896194 L41162	25424	+	NM_002531|NTSR1|4923|neurotensin receptor 1 (high affinity)##X70070|NTSR1|4923|neurotensin receptor 1 (high affinity)##BC015727|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AK023410|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AF205072|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AF104334|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##NM_016354|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AK001776|C20orf20|55257|chromosome 20 open reading frame 20##NM_018270|C20orf20|55257|chromosome 20 open reading frame 20##BC014235|C20orf20|55257|chromosome 20 open reading frame 20##BC009889|C20orf20|55257|chromosome 20 open reading frame 20##BC018841|C20orf20|55257|chromosome 20 open reading frame 20##AB085682|C20orf20|55257|chromosome 20 open reading frame 20##NM_007346|OGFR|11054|opioid growth factor receptor##AK314696|OGFR|11054|opioid growth factor receptor##AK022234|OGFR|11054|opioid growth factor receptor##AF109134|OGFR|11054|opioid growth factor receptor##BC008768|OGFR|11054|opioid growth factor receptor##BC014137|OGFR|11054|opioid growth factor receptor##DQ892943|OGFR|11054|opioid growth factor receptor##EU176723|OGFR|11054|opioid growth factor receptor##BC032666|OGFR|11054|opioid growth factor receptor##BC011705|COL9A3|1299|collagen, type IX, alpha 3##NM_001853|COL9A3|1299|collagen, type IX, alpha 3##DQ892946|COL9A3|1299|collagen, type IX, alpha 3##DQ896194|COL9A3|1299|collagen, type IX, alpha 3##L41162|COL9A3|1299|collagen, type IX, alpha 3	0.082422	
chr2	173892319	173892435	reg1009256.p1	11.465	+	BC040183 NM_001100397 AK311500 AK311697	-206051	+	TSC_hg19_v1_chr2_+_173600637 AB027471 AK313084 BC024004 AB590290 DQ890549 DQ894011	-291705	+	AB209681 TSC_hg19_v1_chr2_+_173600599 U78516	-291777	+	AB208974 TSC_hg19_v1_chr2_+_173940455	48071	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	48169	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	48271	+	BC040183|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##NM_001100397|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311500|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311697|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB027471|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK313084|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##BC024004|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ890549|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ894011|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB209681|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##U78516|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB208974|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK	0.998893	CTCF.p2:-8:0.999
chr12	95269473	95269606	reg1008166.p2	11.464	+	EU831778 EU831856 BC040535 NM_020698	-225275	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-415807	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-415897	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	127931	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	127977	-	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	197759	-	EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	0.015325	
chr17	35754761	35754862	reg1006711.p1	11.464	+	AK096966 BC034672 NM_173625 CU689930	-21831	+	TSC_hg19_v1_chr17_-_35716040 AB371587 AK309084 AY315621 AY315622 NM_198836	-38759	-	AY315619 AY315620 NM_198837 NM_198838	-98120	-	AK308905 TSC_hg19_v1_chr17_-_35766928 AY315623 AY315625 AY315626 NM_198834 NM_198839	12064	-	TSC_hg19_v1_chr17_+_35766978 NM_001166105 AK096371 AK225918	12151	+	AK022767 NM_001488 NM_133439	12500	+	AK096966|C17orf78|284099|chromosome 17 open reading frame 78##BC034672|C17orf78|284099|chromosome 17 open reading frame 78##NM_173625|C17orf78|284099|chromosome 17 open reading frame 78##AB371587|ACACA|31|acetyl-CoA carboxylase alpha##AK309084|ACACA|31|acetyl-CoA carboxylase alpha##AY315621|ACACA|31|acetyl-CoA carboxylase alpha##AY315622|ACACA|31|acetyl-CoA carboxylase alpha##NM_198836|ACACA|31|acetyl-CoA carboxylase alpha##AY315619|ACACA|31|acetyl-CoA carboxylase alpha##AY315620|ACACA|31|acetyl-CoA carboxylase alpha##NM_198837|ACACA|31|acetyl-CoA carboxylase alpha##NM_198838|ACACA|31|acetyl-CoA carboxylase alpha##AK308905|ACACA|31|acetyl-CoA carboxylase alpha##AY315623|ACACA|31|acetyl-CoA carboxylase alpha##AY315625|ACACA|31|acetyl-CoA carboxylase alpha##AY315626|ACACA|31|acetyl-CoA carboxylase alpha##NM_198834|ACACA|31|acetyl-CoA carboxylase alpha##NM_198839|ACACA|31|acetyl-CoA carboxylase alpha##NM_001166105|TADA2A|6871|transcriptional adaptor 2A##AK096371|TADA2A|6871|transcriptional adaptor 2A##AK225918|TADA2A|6871|transcriptional adaptor 2A##AK022767|TADA2A|6871|transcriptional adaptor 2A##NM_001488|TADA2A|6871|transcriptional adaptor 2A##NM_133439|TADA2A|6871|transcriptional adaptor 2A	0.458594	CTCF.p2:20:0.459
chr1	99645970	99646075	reg1007374.p1	11.464	+	BC040174 AK295688 BC140086 BC143086 AY634620 BC136350 BC144000 AY574039 FJ472844 NM_001010861 NM_001037317	-175710	-	TSC_hg19_v1_chr1_+_99127278 NM_015976 NM_152238 AK025031 AK223229 AL049989 AF121857 AK298211 BC018105 BC010349	-518714	+	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	-1259416	-	AF541281 NM_001166252 NM_014839 AB007924 AK056665 AY304518 AB384482 BC042963 TSC_hg19_v1_chr1_+_99730047 AK291369 AK297417	83928	+	TSC_hg19_v1_chr1_+_99730067 AF357013 AK300361	84063	+	NM_017734 AF262379 AL390971 AJ312214 BC012570 AK000278 AL390973	465545	+	BC040174|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AK295688|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC140086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC143086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY634620|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC136350|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC144000|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY574039|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##FJ472844|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001010861|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001037317|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_015976|SNX7|51375|sorting nexin 7##NM_152238|SNX7|51375|sorting nexin 7##AK025031|SNX7|51375|sorting nexin 7##AK223229|SNX7|51375|sorting nexin 7##AL049989|SNX7|51375|sorting nexin 7##AF121857|SNX7|51375|sorting nexin 7##AK298211|SNX7|51375|sorting nexin 7##BC018105|SNX7|51375|sorting nexin 7##BC010349|SNX7|51375|sorting nexin 7##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase##AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AF357013|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK300361|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_017734|PALMD|54873|palmdelphin##AF262379|PALMD|54873|palmdelphin##AL390971|PALMD|54873|palmdelphin##AJ312214|PALMD|54873|palmdelphin##BC012570|PALMD|54873|palmdelphin##AK000278|PALMD|54873|palmdelphin##AL390973|PALMD|54873|palmdelphin	0.976502	CTCF.p2:-8:0.977
chr12	44409295	44409414	reg1005511.p1	11.462	+	TSC_hg19_v1_chr12_+_44229883 BC042192 BC060798 AK057287 BC030284 AL136855 NM_032256	-179448	+	AK127868 BT019691 CR541736 CR541761 AB209302 AB384914 TSC_hg19_v1_chr12_-_44200120 AK291223 BC022491 BC022344 U02680 BC068548 EU832120 EU832214 AK297206 BC043148 NM_001242397 NM_002822	-209242	-	TSC_hg19_v1_chr12_+_44152777 BC013316 AY340962 AY340963 AY340964 AY340965 AY340966 AY340967 AF155118 AK000528	-256575	+	D89629 AK315960 AK299277 NM_001145109	860037	-	BC020544 TSC_hg19_v1_chr12_-_45269991	860623	-	TSC_hg19_v1_chr12_-_45270099 AK056082 AK297521 AK309825 D83018	860751	-	BC042192|TMEM117|84216|transmembrane protein 117##BC060798|TMEM117|84216|transmembrane protein 117##AK057287|TMEM117|84216|transmembrane protein 117##BC030284|TMEM117|84216|transmembrane protein 117##AL136855|TMEM117|84216|transmembrane protein 117##NM_032256|TMEM117|84216|transmembrane protein 117##AK127868|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BT019691|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541736|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541761|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AB209302|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK291223|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022491|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022344|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##U02680|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC068548|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832120|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832214|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK297206|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC043148|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_001242397|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_002822|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC013316|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340962|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340963|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340964|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340965|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340966|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340967|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AF155118|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK000528|IRAK4|51135|interleukin-1 receptor-associated kinase 4##D89629|NELL2|4753|NEL-like 2 (chicken)##AK315960|NELL2|4753|NEL-like 2 (chicken)##AK299277|NELL2|4753|NEL-like 2 (chicken)##NM_001145109|NELL2|4753|NEL-like 2 (chicken)##BC020544|NELL2|4753|NEL-like 2 (chicken)##AK056082|NELL2|4753|NEL-like 2 (chicken)##AK297521|NELL2|4753|NEL-like 2 (chicken)##AK309825|NELL2|4753|NEL-like 2 (chicken)##D83018|NELL2|4753|NEL-like 2 (chicken)	0.472365	CTCF.p2:-18:0.458
chr19	12034570	12034704	reg1009208.p1	11.462	+	TSC_hg19_v1_chr19_+_11998643 BC051309 NM_021915 EU446913	-35964	+	AL833935 NM_152262	-57794	+	TSC_hg19_v1_chr19_+_11925098 AK095252 NM_152357 BC035760	-109531	+	TSC_hg19_v1_chr19_+_12035889 AK299182 AK308305 AL136732 NM_144566 BC144406 BC136777	1281	+	AK092240 AK299224 AX747424 NM_001012753 BC105711 BC105712 BC105713	41245	+	TSC_hg19_v1_chr19_-_12146492 AK129553 BC047412	111852	-	BC051309|ZNF69|7620|zinc finger protein 69##NM_021915|ZNF69|7620|zinc finger protein 69##EU446913|ZNF69|7620|zinc finger protein 69##AL833935|ZNF439|90594|zinc finger protein 439##NM_152262|ZNF439|90594|zinc finger protein 439##AK095252|ZNF440|126070|zinc finger protein 440##NM_152357|ZNF440|126070|zinc finger protein 440##BC035760|ZNF440|126070|zinc finger protein 440##AK299182|ZNF763|284390|zinc finger protein 763##AK308305|ZNF700|90592|zinc finger protein 700##AL136732|ZNF700|90592|zinc finger protein 700##NM_144566|ZNF700|90592|zinc finger protein 700##BC144406|ZNF700|90592|zinc finger protein 700##BC136777|ZNF700|90592|zinc finger protein 700##AK092240|ZNF763|284390|zinc finger protein 763##AK299224|ZNF763|284390|zinc finger protein 763##NM_001012753|ZNF763|284390|zinc finger protein 763##BC105711|ZNF763|284390|zinc finger protein 763##BC105712|ZNF763|284390|zinc finger protein 763##BC105713|ZNF763|284390|zinc finger protein 763##BC047412|ZNF433|163059|zinc finger protein 433	0.997605	CTCF.p2:-3:0.998
chr14	31551333	31551453	reg1006823.p1	11.461	+	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	-55823	-	NM_001128126 NM_007077	-56711	+	TSC_hg19_v1_chr14_+_31343764 NM_001135058 NM_004086 AY358900 AF006740 AK292724 BC000640 BC007230 BC018827	-207675	+	TSC_hg19_v1_chr14_-_31676690 NM_015382	125292	-	TSC_hg19_v1_chr14_-_31676920 BC016947	125542	-	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	338368	-	BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3##NM_001128126|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##NM_007077|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##NM_001135058|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_004086|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AY358900|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AF006740|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AK292724|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC000640|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC007230|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC018827|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_015382|HECTD1|25831|HECT domain containing 1##BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A	0.999246	CTCF.p2:0:0.999
chr19	48854640	48854786	reg1009128.p1	11.461	+	TSC_hg19_v1_chr19_+_48828847 BC009718 U52101	-25879	+	TSC_hg19_v1_chr19_+_48828629 NM_001425 U87947	-26073	+	TSC_hg19_v1_chr19_-_48825152 AK128144	-29543	-	TSC_hg19_v1_chr19_-_48867198 BC004363 BC040021 AY358161 BC016919 NM_018273 AK001784 AK291521 AK294408 AK297591 AK297610 AK298317 AK129801 AK303635	12556	-	NM_012451 BC106891	12996	+	CU676330 DQ891992 DQ895182 TSC_hg19_v1_chr19_-_48894672	39931	-	BC009718|EMP3|2014|epithelial membrane protein 3##U52101|EMP3|2014|epithelial membrane protein 3##NM_001425|EMP3|2014|epithelial membrane protein 3##U87947|EMP3|2014|epithelial membrane protein 3##AK128144|CCDC114|93233|coiled-coil domain containing 114##BC040021|TMEM143|55260|transmembrane protein 143##AY358161|TMEM143|55260|transmembrane protein 143##BC016919|TMEM143|55260|transmembrane protein 143##NM_018273|TMEM143|55260|transmembrane protein 143##AK291521|TMEM143|55260|transmembrane protein 143##AK294408|TMEM143|55260|transmembrane protein 143##AK297591|TMEM143|55260|transmembrane protein 143##AK297610|TMEM143|55260|transmembrane protein 143##AK298317|TMEM143|55260|transmembrane protein 143##AK129801|TMEM143|55260|transmembrane protein 143##AK303635|TMEM143|55260|transmembrane protein 143##NM_012451|SYNGR4|23546|synaptogyrin 4##BC106891|SYNGR4|23546|synaptogyrin 4##DQ891992|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##DQ895182|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1	0.999817	CTCF.p2:-4:1.000
chr3	193506043	193506172	reg1009630.p1	11.461	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-194942	+	TSC_hg19_v1_chr3_+_193311006 BC043443 BC075805 AB011139	-195040	+	TSC_hg19_v1_chr3_+_193310928 NM_015560 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837	-195152	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	347826	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	347848	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	565967	-	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)##BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)##AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2	0.833125	CTCF.p2:-8:0.833
chr12	51815196	51815328	reg1009624.p1	11.460	+	TSC_hg19_v1_chr12_+_51785519 AK128321	-29741	+	TSC_hg19_v1_chr12_-_51785431 AK296852	-29829	-	BC035822 NM_007210	-30067	-	AK299545 TSC_hg19_v1_chr12_+_51818596 NM_001039960 NM_004858 DQ063579	3336	+	TSC_hg19_v1_chr12_+_51818698 BC025994 AF069512 AF107099 CU693092 AL831915	3522	+	TSC_hg19_v1_chr12_+_51985016 AB027567 NM_014191	169755	+	AK128321|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AK296852|GALNT6|11226|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)##BC035822|GALNT6|11226|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)##NM_007210|GALNT6|11226|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)##AK299545|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##NM_001039960|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##NM_004858|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ063579|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##BC025994|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AF069512|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AF107099|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AL831915|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AB027567|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##NM_014191|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	0.595296	CTCF.p2:-21:0.595
chr15	81629052	81629192	reg1010647.p1	11.460	+	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	-12628	-	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	-39818	+	NM_172217 AY324389	-111433	+	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	37363	-	AK094145 TSC_hg19_v1_chr15_-_82336883	707761	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	709244	-	AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##NM_172217|IL16|3603|interleukin 16##AY324389|IL16|3603|interleukin 16##NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)	0.0	
chr4	77426149	77426270	reg1007829.p1	11.460	+	AB055660 NM_020859	-69957	+	BC035224 NM_001042784	-97752	-	TSC_hg19_v1_chr4_+_77227894 DQ891974 DQ895165 CU692542	-198308	+	AK027744 TSC_hg19_v1_chr4_+_77610613	184402	+	TSC_hg19_v1_chr4_+_77610738 AK304103	184542	+	NM_001029870 BC137241 BC137255	392830	-	AB055660|SHROOM3|57619|shroom family member 3##NM_020859|SHROOM3|57619|shroom family member 3##BC035224|CCDC158|339965|coiled-coil domain containing 158##NM_001042784|CCDC158|339965|coiled-coil domain containing 158##DQ891974|STBD1|8987|starch binding domain 1##DQ895165|STBD1|8987|starch binding domain 1##AK027744|SHROOM3|57619|shroom family member 3##AK304103|SHROOM3|57619|shroom family member 3##NM_001029870|ANKRD56|345079|ankyrin repeat domain 56##BC137241|ANKRD56|345079|ankyrin repeat domain 56##BC137255|ANKRD56|345079|ankyrin repeat domain 56	0.999566	CTCF.p2:3:1.000
chr6	115069220	115069332	reg1007505.p1	11.460	+	AF503292 NM_153612 BC093911 BC093913	-685252	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-776940	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	-777004	-	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	1312606	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	1352733	+	AK097758 TSC_hg19_v1_chr6_-_116422450	1353154	-	AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	0.983165	CTCF.p2:-7:0.983
chr6	74448966	74449100	reg1008155.p2	11.460	+	TSC_hg19_v1_chr6_+_74406033 AY149920	-43009	+	EF553520 TSC_hg19_v1_chr6_+_74405925 AY788891 BX641095	-43113	+	TSC_hg19_v1_chr6_+_74405882 AK095888	-43162	+	BC146868 U73778 NM_004370 NM_080645 TSC_hg19_v1_chr6_-_75915745	1466622	-	TSC_hg19_v1_chr6_-_75915768 AK307558	1466747	-	CR407646 CR542125 X15822 TSC_hg19_v1_chr6_-_75953494 BC101826 BC101828 AK312154	1504446	-	AY149920|CD109|135228|CD109 molecule##EF553520|CD109|135228|CD109 molecule##AY788891|CD109|135228|CD109 molecule##BX641095|CD109|135228|CD109 molecule##AK095888|CD109|135228|CD109 molecule##BC146868|COL12A1|1303|collagen, type XII, alpha 1##U73778|COL12A1|1303|collagen, type XII, alpha 1##NM_004370|COL12A1|1303|collagen, type XII, alpha 1##NM_080645|COL12A1|1303|collagen, type XII, alpha 1##AK307558|COL12A1|1303|collagen, type XII, alpha 1##CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	0.969207	CTCF.p2:-13:0.969
chr5	94186051	94186198	reg1009138.p1	11.459	+	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	-231751	+	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	-231867	-	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	-738804	-	AK025997 TSC_hg19_v1_chr5_-_94224607	38482	-	AY656716 AK058012 BC030005 AK057694 TSC_hg19_v1_chr5_-_94417350	231144	-	NM_001002796	231420	-	BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1##AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1##BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1##AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_001002796|MCTP1|79772|multiple C2 domains, transmembrane 1	0.030725	
chr10	21784724	21784874	reg1009640.p1	11.458	+	TSC_hg19_v1_chr10_-_21463021 BC126132 BC126134 BC144201 AJ580772 NM_001173484 NM_213569	-321732	-	AB209311 TSC_hg19_v1_chr10_-_21462987	-321812	-	BC140744 BC144447 NM_001010896 NM_001177483	-349312	-	BC130594 BC132974 TSC_hg19_v1_chr10_-_21785960	1133	-	TSC_hg19_v1_chr10_-_21786190 BC040880	1392	-	TSC_hg19_v1_chr10_-_21786207 NM_001010911	1426	-	BC126132|NEBL|10529|nebulette##BC126134|NEBL|10529|nebulette##BC144201|NEBL|10529|nebulette##AJ580772|NEBL|10529|nebulette##NM_001173484|NEBL|10529|nebulette##NM_213569|NEBL|10529|nebulette##AB209311|NEBL|10529|nebulette##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113##BC130594|C10orf114|399726|chromosome 10 open reading frame 114##BC132974|C10orf114|399726|chromosome 10 open reading frame 114##BC040880|C10orf114|399726|chromosome 10 open reading frame 114##NM_001010911|C10orf114|399726|chromosome 10 open reading frame 114	0.977678	CTCF.p2:-15:0.978
chr12	93381198	93381350	reg1007638.p1	11.458	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-58176	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-58231	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	-58336	-	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	390618	+	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	454412	-	TSC_hg19_v1_chr12_-_93835718 D83004	454444	-	NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.743329	CTCF.p2:-19:0.743
chr19	42325288	42325429	reg1008322.p1	11.458	+	AK298694 NM_001815 D90277 D90278 L00692 L00693 BC106728	-24806	+	NM_002483 TSC_hg19_v1_chr19_+_42259437 AK312542 M29541 M18728 M18216 BC005008 BT009774	-65887	+	M16234 TSC_hg19_v1_chr19_+_42221424	-103940	+	AY358726 NM_173506	23149	-	AK057404 AK301822 NM_001040283 BC039266 BC029202	23713	+	BC018616 NM_001022	38629	+	NM_001815|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90277|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90278|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00692|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00693|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##BC106728|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##NM_002483|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##AK312542|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M29541|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18728|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18216|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BC005008|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BT009774|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M16234|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AY358726|LYPD4|147719|LY6/PLAUR domain containing 4##NM_173506|LYPD4|147719|LY6/PLAUR domain containing 4##AK057404|DMRTC2|63946|DMRT-like family C2##AK301822|DMRTC2|63946|DMRT-like family C2##NM_001040283|DMRTC2|63946|DMRT-like family C2##BC039266|DMRTC2|63946|DMRT-like family C2##BC029202|DMRTC2|63946|DMRT-like family C2##BC018616|RPS19|6223|ribosomal protein S19##NM_001022|RPS19|6223|ribosomal protein S19	0.882565	CTCF.p2:3:0.883
chr20	5537900	5538014	reg1007793.p1	11.458	+	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-242921	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-430262	+	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	-430435	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	53630	-	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	193109	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	354169	+	AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)	0.950568	CTCF.p2:0:0.951
chr17	41956040	41956157	reg1008766.p1	11.457	+	AK298112 AK309938 NM_001168322 NM_001168323 NM_001168324 NM_145273 AF427619 AF427620 BC025395 AY358364 CU692992	-31549	+	TSC_hg19_v1_chr17_-_41910537 AK309045 AK299535 AK313045 AK311368 BC035833 BC025743 BC047017 NM_001932	-45472	-	BC056865 TSC_hg19_v1_chr17_-_41910234	-45887	-	TSC_hg19_v1_chr17_-_41977993 AK299321 CR936598	21882	-	AL136554 X82895 TSC_hg19_v1_chr17_-_41984895 AK299518 AK223560 AK294564 AK299286	28797	-	BC030287 CR936730 NM_005374 AK311166	29021	-	AK298112|CD300LG|146894|CD300 molecule-like family member g##AK309938|CD300LG|146894|CD300 molecule-like family member g##NM_001168322|CD300LG|146894|CD300 molecule-like family member g##NM_001168323|CD300LG|146894|CD300 molecule-like family member g##NM_001168324|CD300LG|146894|CD300 molecule-like family member g##NM_145273|CD300LG|146894|CD300 molecule-like family member g##AF427619|CD300LG|146894|CD300 molecule-like family member g##AF427620|CD300LG|146894|CD300 molecule-like family member g##BC025395|CD300LG|146894|CD300 molecule-like family member g##AY358364|CD300LG|146894|CD300 molecule-like family member g##AK309045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##AK299535|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##AK313045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##AK311368|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC035833|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC025743|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC047017|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##NM_001932|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC056865|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##AK299321|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##CR936598|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AL136554|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299518|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK223560|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK294564|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299286|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##BC030287|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##CR936730|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##NM_005374|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK311166|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	0.750499	CTCF.p2:-14:0.737
chr2	232578633	232578760	reg1008469.p1	11.457	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	-5364	+	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	-5462	+	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	-121079	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	67229	-	TSC_hg19_v1_chr2_+_232646442 AK307486	67741	+	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	72420	+	BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AK307486|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)	1.074688	CTCF.p2:8:0.993
chr9	116071629	116071745	reg1008324.p1	11.457	+	BC013036 NM_145051	-10368	-	TSC_hg19_v1_chr9_+_116037955 BC007424 AF016369 AB209797 AK313131 BC001588 EU176331 EU176673 AB590453 AY572489 CR457105	-33698	+	NM_001244926 NM_004697 TSC_hg19_v1_chr9_+_116037937 AK225056 U82756	-33756	+	AK074891 AL833635 BC022982 AK093240 AX748007 BC012352 TSC_hg19_v1_chr9_-_116102556 AK313843 NM_001012361 NM_145241	30889	-	NM_017688 AK092607 AJ276691 AB527588	40146	+	BC031878 NM_031219	66653	-	BC013036|RNF183|138065|ring finger protein 183##NM_145051|RNF183|138065|ring finger protein 183##BC007424|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##AF016369|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##AB209797|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##AK313131|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##BC001588|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##EU176331|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##EU176673|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##AY572489|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##CR457105|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##NM_001244926|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##NM_004697|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##AK225056|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##U82756|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##AK074891|WDR31|114987|WD repeat domain 31##AL833635|WDR31|114987|WD repeat domain 31##BC022982|WDR31|114987|WD repeat domain 31##AK093240|WDR31|114987|WD repeat domain 31##BC012352|WDR31|114987|WD repeat domain 31##AK313843|WDR31|114987|WD repeat domain 31##NM_001012361|WDR31|114987|WD repeat domain 31##NM_145241|WDR31|114987|WD repeat domain 31##NM_017688|BSPRY|54836|B-box and SPRY domain containing##AK092607|BSPRY|54836|B-box and SPRY domain containing##AJ276691|BSPRY|54836|B-box and SPRY domain containing##BC031878|HDHD3|81932|haloacid dehalogenase-like hydrolase domain containing 3##NM_031219|HDHD3|81932|haloacid dehalogenase-like hydrolase domain containing 3	0.330935	CTCF.p2:-5:0.313
chr4	36352850	36352963	reg1006830.p1	11.456	+	BC157885 NM_001170700	-67263	+	AK131492 NM_001136536 AK304357 AK316523	-69660	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	-106869	-	NM_001144990	893783	+	NM_001104629 BC037906	1102669	+	AK001879 NM_018302 AK225192	1232963	+	BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_001144990|KIAA1239|57495|KIAA1239##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19	0.0	
chr12	19910377	19910516	reg1007378.p1	11.455	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-317258	+	TSC_hg19_v1_chr12_+_19592783 AB209384	-317651	+	TSC_hg19_v1_chr12_+_19592425 AK131361 NM_001114176 NM_153207 AK126973 BC022220	-317927	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	611752	+	AK308317 NM_001244683	814351	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	938049	+	BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##AK131361|AEBP2|121536|AE binding protein 2##NM_001114176|AEBP2|121536|AE binding protein 2##NM_153207|AEBP2|121536|AE binding protein 2##AK126973|AEBP2|121536|AE binding protein 2##BC022220|AEBP2|121536|AE binding protein 2##BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	0.297898	CTCF.p2:-2:0.298
chr19	14472664	14472770	reg1007410.p1	11.455	+	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	-155669	-	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	-211917	-	TSC_hg19_v1_chr19_+_14247979 BX537706	-224726	+	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	19332	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	19538	+	TSC_hg19_v1_chr19_-_14529877 AK301847	57172	-	AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule##AK301847|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A	0.438512	CTCF.p2:-20:0.439
chr2	74477381	74477497	reg1007027.p1	11.455	+	NM_006636 TSC_hg19_v1_chr2_+_74425741 AK300035 AK130664 AK222826 AK223041 AK302245 AK313138 BC015062 BC001548 BC017054 AB529041 X16396 DQ894679	-51702	+	AK057260 TSC_hg19_v1_chr2_-_74425749	-51724	-	AJ577474 CU678456 TSC_hg19_v1_chr2_-_74406014 AB016839 AK023321 AK001650 BC003398 NM_018221 AK021657	-71532	-	AF243499 AF293338 NM_021196	64711	-	NM_133478	93094	-	AK315014 BC071583 TSC_hg19_v1_chr2_-_74601817 NM_001135041 NM_023019	124318	-	NM_006636|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK300035|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK130664|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK222826|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK223041|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK302245|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK313138|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC015062|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC001548|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC017054|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##X16396|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##DQ894679|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AJ577474|MOB1A|55233|MOB kinase activator 1A##AB016839|MOB1A|55233|MOB kinase activator 1A##AK023321|MOB1A|55233|MOB kinase activator 1A##AK001650|MOB1A|55233|MOB kinase activator 1A##BC003398|MOB1A|55233|MOB kinase activator 1A##NM_018221|MOB1A|55233|MOB kinase activator 1A##AK021657|MOB1A|55233|MOB kinase activator 1A##AF243499|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##AF293338|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##NM_021196|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##NM_133478|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##AK315014|DCTN1|1639|dynactin 1##BC071583|DCTN1|1639|dynactin 1##NM_001135041|DCTN1|1639|dynactin 1##NM_023019|DCTN1|1639|dynactin 1	0.999854	CTCF.p2:-17:0.984
chr5	92917212	92917317	reg1006872.p2	11.455	+	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	-301	-	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-2238132	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-2241102	+	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	1719	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	3404	+	AK309742 TSC_hg19_v1_chr5_-_92957232	39947	-	AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	0.982303	CTCF.p2:-1:0.982
chr17	18120851	18120945	reg1006050.p1	11.454	+	TSC_hg19_v1_chr17_+_18087141 AK301107 BC062339	-33709	+	TSC_hg19_v1_chr17_+_18086815 NM_017758	-34059	+	AF144094 NM_016239	-108879	+	TSC_hg19_v1_chr17_+_18128931 BC028037 NM_004140 BC151838 BC028214 X86371	8040	+	AK310400 TSC_hg19_v1_chr17_-_18162017 AB208864 U01184 DQ893621 DQ896850	41045	-	AK295814 AK297836 TSC_hg19_v1_chr17_-_18162033 BC017030 AK295655	41131	-	AK301107|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##BC062339|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##NM_017758|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##AF144094|MYO15A|51168|myosin XVA##NM_016239|MYO15A|51168|myosin XVA##BC028037|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##NM_004140|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##BC151838|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##BC028214|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##X86371|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##AK310400|FLII|2314|flightless I homolog (Drosophila)##AB208864|FLII|2314|flightless I homolog (Drosophila)##U01184|FLII|2314|flightless I homolog (Drosophila)##DQ893621|FLII|2314|flightless I homolog (Drosophila)##DQ896850|FLII|2314|flightless I homolog (Drosophila)##AK295814|FLII|2314|flightless I homolog (Drosophila)##AK297836|FLII|2314|flightless I homolog (Drosophila)##BC017030|FLII|2314|flightless I homolog (Drosophila)##AK295655|FLII|2314|flightless I homolog (Drosophila)	0.03539	
chr17	7535898	7536014	reg1009052.p1	11.454	+	EU352660 NM_001040 NM_001146279 NM_001146280 NM_001146281 TSC_hg19_v1_chr17_+_7533452 BC101785 BC112186 BC069597 X05403 EU352661 EU352662 EU352663 EU352664	-2445	+	TSC_hg19_v1_chr17_+_7533444 EU352659	-2531	+	TSC_hg19_v1_chr17_+_7531286 AK302603 EU352657 EU352658 X16351 EU352665 EU352666 EU352667 EU352668 EU352669	-4610	+	TSC_hg19_v1_chr17_+_7554243 NM_001678	18290	+	TSC_hg19_v1_chr17_+_7554417 M81181 AK290143 BC126175	18501	+	TSC_hg19_v1_chr17_+_7554712 U45945 HQ258155 AY946017	18857	+	EU352660|SHBG|6462|sex hormone-binding globulin##NM_001040|SHBG|6462|sex hormone-binding globulin##NM_001146279|SHBG|6462|sex hormone-binding globulin##NM_001146280|SHBG|6462|sex hormone-binding globulin##NM_001146281|SHBG|6462|sex hormone-binding globulin##BC101785|SHBG|6462|sex hormone-binding globulin##BC112186|SHBG|6462|sex hormone-binding globulin##BC069597|SHBG|6462|sex hormone-binding globulin##X05403|SHBG|6462|sex hormone-binding globulin##EU352661|SHBG|6462|sex hormone-binding globulin##EU352662|SHBG|6462|sex hormone-binding globulin##EU352663|SHBG|6462|sex hormone-binding globulin##EU352664|SHBG|6462|sex hormone-binding globulin##EU352659|SHBG|6462|sex hormone-binding globulin##AK302603|SHBG|6462|sex hormone-binding globulin##EU352657|SHBG|6462|sex hormone-binding globulin##EU352658|SHBG|6462|sex hormone-binding globulin##X16351|SHBG|6462|sex hormone-binding globulin##EU352665|SHBG|6462|sex hormone-binding globulin##EU352666|SHBG|6462|sex hormone-binding globulin##EU352667|SHBG|6462|sex hormone-binding globulin##EU352668|SHBG|6462|sex hormone-binding globulin##EU352669|SHBG|6462|sex hormone-binding globulin##NM_001678|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide##M81181|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide##AK290143|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide##BC126175|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide##U45945|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide##HQ258155|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide##AY946017|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide	0.997211	CTCF.p2:0:0.997
chr20	49546021	49546161	reg1009333.p1	11.454	+	AF361220 NM_001010974 NM_017843 NM_198799 TSC_hg19_v1_chr20_+_49411542 AK000502 BC038381 BC047337 AJ511266 BC056883	-134573	+	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	-198022	+	TSC_hg19_v1_chr20_-_49308074 AK124347	-238014	-	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	1632	-	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	28972	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	29277	+	AF361220|BCAS4|55653|breast carcinoma amplified sequence 4##NM_001010974|BCAS4|55653|breast carcinoma amplified sequence 4##NM_017843|BCAS4|55653|breast carcinoma amplified sequence 4##NM_198799|BCAS4|55653|breast carcinoma amplified sequence 4##AK000502|BCAS4|55653|breast carcinoma amplified sequence 4##BC038381|BCAS4|55653|breast carcinoma amplified sequence 4##BC047337|BCAS4|55653|breast carcinoma amplified sequence 4##AJ511266|BCAS4|55653|breast carcinoma amplified sequence 4##BC056883|BCAS4|55653|breast carcinoma amplified sequence 4##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3	0.359349	CTCF.p2:25:0.214
chr17	37225758	37225877	reg1008872.p1	11.453	+	BC140879 BC140880 NM_001008777 AY700575	-102178	-	TSC_hg19_v1_chr17_+_37026351 X82456 BC012460 DQ891539 DQ894728 AB463833 CU675705 AK289847	-199421	+	TSC_hg19_v1_chr17_+_37026313 AK295522 AK296092 AK309933 BC007560	-199503	+	EU832116 EU832210 AK312999 TSC_hg19_v1_chr17_-_37307740 AF279144 AF378753 AY704670 AY704671	81915	-	TSC_hg19_v1_chr17_-_37307863 BC036059	82030	-	TSC_hg19_v1_chr17_-_37307891 NM_020405	82078	-	BC140879|FBXO47|494188|F-box protein 47##BC140880|FBXO47|494188|F-box protein 47##NM_001008777|FBXO47|494188|F-box protein 47##AY700575|FBXO47|494188|F-box protein 47##X82456|LASP1|3927|LIM and SH3 protein 1##BC012460|LASP1|3927|LIM and SH3 protein 1##DQ891539|LASP1|3927|LIM and SH3 protein 1##DQ894728|LASP1|3927|LIM and SH3 protein 1##AK289847|LASP1|3927|LIM and SH3 protein 1##AK295522|LASP1|3927|LIM and SH3 protein 1##AK296092|LASP1|3927|LIM and SH3 protein 1##AK309933|LASP1|3927|LIM and SH3 protein 1##BC007560|LASP1|3927|LIM and SH3 protein 1##EU832116|PLXDC1|57125|plexin domain containing 1##EU832210|PLXDC1|57125|plexin domain containing 1##AK312999|PLXDC1|57125|plexin domain containing 1##AF279144|PLXDC1|57125|plexin domain containing 1##AF378753|PLXDC1|57125|plexin domain containing 1##AY704670|PLXDC1|57125|plexin domain containing 1##AY704671|PLXDC1|57125|plexin domain containing 1##BC036059|PLXDC1|57125|plexin domain containing 1##NM_020405|PLXDC1|57125|plexin domain containing 1	0.017212	
chr8	28692777	28692908	reg1009728.p1	11.453	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	-133692	+	TSC_hg19_v1_chr8_+_28559032 AB011091	-133767	+	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	-341077	+	TSC_hg19_v1_chr8_-_28747454 BC016687 AK225072 AK304525 AK298468 NM_001172562 BC025267 AK300593 AK295977 AK001733 AK225530	54618	-	NM_001145159 NM_018250	54855	-	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	55075	+	AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3##AB011091|EXTL3|2137|exostoses (multiple)-like 3##NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##BC016687|INTS9|55756|integrator complex subunit 9##AK225072|INTS9|55756|integrator complex subunit 9##AK304525|INTS9|55756|integrator complex subunit 9##AK298468|INTS9|55756|integrator complex subunit 9##NM_001172562|INTS9|55756|integrator complex subunit 9##BC025267|INTS9|55756|integrator complex subunit 9##AK300593|INTS9|55756|integrator complex subunit 9##AK295977|INTS9|55756|integrator complex subunit 9##AK001733|INTS9|55756|integrator complex subunit 9##AK225530|INTS9|55756|integrator complex subunit 9##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1	0.537223	CTCF.p2:-7:0.537
chr9	27333287	27333407	reg1005066.p1	11.452	+	BC137351 BC137352 BC144602 BC014307 AJ278482 NM_001161585 NM_020641	-36226	-	AK294887 NM_000459	-224205	+	BC126156 BC136298 AK222987 AK024955 BC056252 NM_022901	-327678	-	AF146759 AF315688 NM_020124 AY358855 AB463795	190975	+	TSC_hg19_v1_chr9_-_27529809 AL832572 BC033027 AK023266 NM_024761	196303	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	240124	-	BC137351|C9orf11|54586|chromosome 9 open reading frame 11##BC137352|C9orf11|54586|chromosome 9 open reading frame 11##BC144602|C9orf11|54586|chromosome 9 open reading frame 11##BC014307|C9orf11|54586|chromosome 9 open reading frame 11##AJ278482|C9orf11|54586|chromosome 9 open reading frame 11##NM_001161585|C9orf11|54586|chromosome 9 open reading frame 11##NM_020641|C9orf11|54586|chromosome 9 open reading frame 11##AK294887|TEK|7010|TEK tyrosine kinase, endothelial##NM_000459|TEK|7010|TEK tyrosine kinase, endothelial##BC126156|LRRC19|64922|leucine rich repeat containing 19##BC136298|LRRC19|64922|leucine rich repeat containing 19##AK222987|LRRC19|64922|leucine rich repeat containing 19##AK024955|LRRC19|64922|leucine rich repeat containing 19##BC056252|LRRC19|64922|leucine rich repeat containing 19##NM_022901|LRRC19|64922|leucine rich repeat containing 19##AF146759|IFNK|56832|interferon, kappa##AF315688|IFNK|56832|interferon, kappa##NM_020124|IFNK|56832|interferon, kappa##AY358855|IFNK|56832|interferon, kappa##AL832572|MOB3B|79817|MOB kinase activator 3B##BC033027|MOB3B|79817|MOB kinase activator 3B##AK023266|MOB3B|79817|MOB kinase activator 3B##NM_024761|MOB3B|79817|MOB kinase activator 3B##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72	0.666729	CTCF.p2:-12:0.667
chrX	67682659	67682780	reg1009072.p1	11.452	+	TSC_hg19_v1_chrX_-_67653677 BC059393 NM_002547 AK309665 BC140763 AK295769 AJ001189 AK309696	-29157	-	NM_001011645	-894037	+	TSC_hg19_v1_chrX_+_66766350 M20260	-916348	+	NM_001195214 NM_173834	35904	+	TSC_hg19_v1_chrX_+_67718892 AK095555 AK292835 BC012469 AK303992 AM393755	36169	+	BC035587 NM_001142503 NM_014725 CR749411	184840	+	BC059393|OPHN1|4983|oligophrenin 1##NM_002547|OPHN1|4983|oligophrenin 1##AK309665|OPHN1|4983|oligophrenin 1##BC140763|OPHN1|4983|oligophrenin 1##AK295769|OPHN1|4983|oligophrenin 1##AJ001189|OPHN1|4983|oligophrenin 1##AK309696|OPHN1|4983|oligophrenin 1##NM_001011645|AR|367|androgen receptor##M20260|AR|367|androgen receptor##NM_001195214|YIPF6|286451|Yip1 domain family, member 6##NM_173834|YIPF6|286451|Yip1 domain family, member 6##AK095555|YIPF6|286451|Yip1 domain family, member 6##AK292835|YIPF6|286451|Yip1 domain family, member 6##BC012469|YIPF6|286451|Yip1 domain family, member 6##AK303992|YIPF6|286451|Yip1 domain family, member 6##AM393755|YIPF6|286451|Yip1 domain family, member 6##BC035587|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142503|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_014725|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##CR749411|STARD8|9754|StAR-related lipid transfer (START) domain containing 8	0.792418	CTCF.p2:-5:0.792
chr1	220853548	220853658	reg1007901.p1	11.451	+	AK098103 AK314614 AF154845 BC113869 BC114478 TSC_hg19_v1_chr1_+_220702027 AK295506 AB385474	-151621	+	TSC_hg19_v1_chr1_+_220701565 AB040910 NM_018650	-152046	+	TSC_hg19_v1_chr1_+_220701527 BC068608	-152078	+	NM_024709 TSC_hg19_v1_chr1_+_220863727 BC036067 AK091937 AK056749 AK056749 AK024208	10099	+	TSC_hg19_v1_chr1_+_220921664 AL136931 BC011973 NM_017898 BC016859	68041	+	NM_022746 TSC_hg19_v1_chr1_+_220960254 AK026043 AK225416 AK094105 AK290812 BC010619	106560	+	AK098103|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK314614|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AF154845|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC113869|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC114478|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK295506|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AB040910|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##NM_018650|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC068608|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##NM_024709|C1orf115|79762|chromosome 1 open reading frame 115##BC036067|C1orf115|79762|chromosome 1 open reading frame 115##AK091937|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK024208|C1orf115|79762|chromosome 1 open reading frame 115##AL136931|MARC2|54996|mitochondrial amidoxime reducing component 2##BC011973|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_017898|MARC2|54996|mitochondrial amidoxime reducing component 2##BC016859|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_022746|MARC1|64757|mitochondrial amidoxime reducing component 1##AK026043|MARC1|64757|mitochondrial amidoxime reducing component 1##AK225416|MARC1|64757|mitochondrial amidoxime reducing component 1##AK094105|MARC1|64757|mitochondrial amidoxime reducing component 1##AK290812|MARC1|64757|mitochondrial amidoxime reducing component 1##BC010619|MARC1|64757|mitochondrial amidoxime reducing component 1	0.509453	CTCF.p2:-6:0.509
chr3	97907531	97907642	reg1008332.p1	11.451	+	NM_001005515	-20043	+	BC136984 NM_001005514	-39387	+	AB528772 NM_001005338	-56046	+	BC137523 BC137524 NM_001005479	75521	+	NM_001005482	94145	+	NM_001005517	165111	+	NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15##BC136984|OR5H14|403273|olfactory receptor, family 5, subfamily H, member 14##NM_001005514|OR5H14|403273|olfactory receptor, family 5, subfamily H, member 14##NM_001005338|OR5H1|26341|olfactory receptor, family 5, subfamily H, member 1##BC137523|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##BC137524|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##NM_001005479|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##NM_001005482|OR5H2|79310|olfactory receptor, family 5, subfamily H, member 2##NM_001005517|OR5K4|403278|olfactory receptor, family 5, subfamily K, member 4	0.018769	
chr18	8389762	8389882	reg1007907.p1	11.450	+	TSC_hg19_v1_chr18_+_7946885 AK294492	-442916	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	-822505	+	NM_001105581	-1158686	+	TSC_hg19_v1_chr18_+_8609434 BC071600 BC098407 BC050338 NM_001025300	219614	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	219924	+	AK131528 NM_015210	327546	+	AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##BC071600|RAB12|201475|RAB12, member RAS oncogene family##BC098407|RAB12|201475|RAB12, member RAS oncogene family##BC050338|RAB12|201475|RAB12, member RAS oncogene family##NM_001025300|RAB12|201475|RAB12, member RAS oncogene family##AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165	0.442339	CTCF.p2:7:0.442
chr8	104524386	104524529	reg1007342.p2	11.450	+	AK126939 NM_001100117	-11482	+	TSC_hg19_v1_chr8_+_104427659 AK001874	-96792	+	TSC_hg19_v1_chr8_+_104427646 AK001693	-96811	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	307118	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	827595	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	954758	-	AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK001874|DCAF13|25879|DDB1 and CUL4 associated factor 13##AK001693|DCAF13|25879|DDB1 and CUL4 associated factor 13##NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase	0.943412	CTCF.p2:5:0.943
chr9	97316771	97316881	reg1008606.p1	11.450	+	TSC_hg19_v1_chr9_+_97136850 NM_032558	-179993	+	HQ258506 BC130390 BC143798 NM_017561	-225912	-	TSC_hg19_v1_chr9_+_97021599 NM_194320 AK289742 AK093956	-295236	+	CR536483 HQ258389 BC113632 BC117477 NM_003837 Y10812	39214	-	AF073475 CU680450 D26054 D26055 D26056 AY544122 TSC_hg19_v1_chr9_-_97401681	84810	-	TSC_hg19_v1_chr9_-_97401794 BC012927 M19922	84960	-	NM_032558|HIATL1|84641|hippocampus abundant transcript-like 1##HQ258506|FAM22F|54754|family with sequence similarity 22, member F##BC130390|FAM22F|54754|family with sequence similarity 22, member F##BC143798|FAM22F|54754|family with sequence similarity 22, member F##NM_017561|FAM22F|54754|family with sequence similarity 22, member F##NM_194320|ZNF169|169841|zinc finger protein 169##AK289742|ZNF169|169841|zinc finger protein 169##AK093956|ZNF169|169841|zinc finger protein 169##CR536483|FBP2|8789|fructose-1,6-bisphosphatase 2##HQ258389|FBP2|8789|fructose-1,6-bisphosphatase 2##BC113632|FBP2|8789|fructose-1,6-bisphosphatase 2##BC117477|FBP2|8789|fructose-1,6-bisphosphatase 2##NM_003837|FBP2|8789|fructose-1,6-bisphosphatase 2##Y10812|FBP2|8789|fructose-1,6-bisphosphatase 2##AF073475|FBP1|2203|fructose-1,6-bisphosphatase 1##D26054|FBP1|2203|fructose-1,6-bisphosphatase 1##D26055|FBP1|2203|fructose-1,6-bisphosphatase 1##D26056|FBP1|2203|fructose-1,6-bisphosphatase 1##AY544122|FBP1|2203|fructose-1,6-bisphosphatase 1##BC012927|FBP1|2203|fructose-1,6-bisphosphatase 1##M19922|FBP1|2203|fructose-1,6-bisphosphatase 1	0.987861	CTCF.p2:-13:0.988
chr11	71274645	71274753	reg1007491.p1	11.449	+	NM_005553 X63755 BC101744 AB126078 CU686892 BC069531	-15115	+	AB126077 NM_021046 AY360461	-25614	+	AB126076 NM_001012503 BC136967 BC136968 AB528865 BC119736	-36370	+	AB126079 BC137550 BC137566 NM_001012710	1909	+	BC130498 BC130502 AB126080 NM_001005405	19215	-	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	223908	+	NM_005553|KRTAP5-9|3846|keratin associated protein 5-9##X63755|KRTAP5-9|3846|keratin associated protein 5-9##BC101744|KRTAP5-9|3846|keratin associated protein 5-9##AB126078|KRTAP5-9|3846|keratin associated protein 5-9##BC069531|KRTAP5-9|3846|keratin associated protein 5-9##AB126077|KRTAP5-8|57830|keratin associated protein 5-8##NM_021046|KRTAP5-8|57830|keratin associated protein 5-8##AY360461|KRTAP5-8|57830|keratin associated protein 5-8##AB126076|KRTAP5-7|440050|keratin associated protein 5-7##NM_001012503|KRTAP5-7|440050|keratin associated protein 5-7##BC136967|KRTAP5-7|440050|keratin associated protein 5-7##BC136968|KRTAP5-7|440050|keratin associated protein 5-7##AB126079|KRTAP5-10|387273|keratin associated protein 5-10##BC137550|KRTAP5-10|387273|keratin associated protein 5-10##BC137566|KRTAP5-10|387273|keratin associated protein 5-10##NM_001012710|KRTAP5-10|387273|keratin associated protein 5-10##BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11##NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1	0.196284	
chr17	29042257	29042368	reg1008579.p1	11.449	+	BC096718 BC098126 BC098273 NM_015594	-155729	+	TSC_hg19_v1_chr17_+_28804434 AK000606 AK291381 NM_001007024 NM_001007025 NM_004871 AK298714 AF047438 BC012620 AF073926 BC040471	-237879	+	AK316409 NM_001199775 AK302878	-334797	+	TSC_hg19_v1_chr17_+_29058664 BC047718	16376	+	TSC_hg19_v1_chr17_-_29151711 DQ298450 DQ892276 CU692798 AK296238 AF046059 BC023567	109363	-	TSC_hg19_v1_chr17_-_29151725 AK313315 NM_015986	109451	-	BC096718|TBC1D29|26083|TBC1 domain family, member 29##BC098126|TBC1D29|26083|TBC1 domain family, member 29##BC098273|TBC1D29|26083|TBC1 domain family, member 29##NM_015594|TBC1D29|26083|TBC1 domain family, member 29##AK000606|GOSR1|9527|golgi SNAP receptor complex member 1##AK291381|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1##NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1##AK298714|GOSR1|9527|golgi SNAP receptor complex member 1##AF047438|GOSR1|9527|golgi SNAP receptor complex member 1##BC012620|GOSR1|9527|golgi SNAP receptor complex member 1##AF073926|GOSR1|9527|golgi SNAP receptor complex member 1##BC040471|GOSR1|9527|golgi SNAP receptor complex member 1##AK316409|CPD|1362|carboxypeptidase D##NM_001199775|CPD|1362|carboxypeptidase D##AK302878|CPD|1362|carboxypeptidase D##BC047718|SUZ12P|440423|suppressor of zeste 12 homolog pseudogene##DQ298450|CRLF3|51379|cytokine receptor-like factor 3##DQ892276|CRLF3|51379|cytokine receptor-like factor 3##AK296238|CRLF3|51379|cytokine receptor-like factor 3##AF046059|CRLF3|51379|cytokine receptor-like factor 3##BC023567|CRLF3|51379|cytokine receptor-like factor 3##AK313315|CRLF3|51379|cytokine receptor-like factor 3##NM_015986|CRLF3|51379|cytokine receptor-like factor 3	0.954169	CTCF.p2:4:0.954
chr1	113261428	113261522	reg1007502.p2	11.448	+	BC011803 BC064628 AL133644 AB527803 EU832164 EU832258 AK093270 AX748024 BC073828 NM_005167	-3564	-	TSC_hg19_v1_chr1_-_113250031 NM_001042678 NM_175744	-11449	-	TSC_hg19_v1_chr1_-_113249750 AK094474	-11727	-	NM_001004440 NM_182759 BC112268 BC117479 BC143949 BC144042 BC144043 AY325116 AY325119	1718	+	BC045664 AK094064 NM_001166496 AF239919 AL162079 TSC_hg19_v1_chr1_-_113498818 AK296688 AK312500 BC026317	237242	-	TSC_hg19_v1_chr1_-_113498861 AK303603 AJ438943 NM_003051	237426	-	BC011803|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC064628|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AL133644|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832164|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832258|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AK093270|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC073828|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_005167|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_001042678|RHOC|389|ras homolog gene family, member C##NM_175744|RHOC|389|ras homolog gene family, member C##AK094474|RHOC|389|ras homolog gene family, member C##NM_001004440|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##NM_182759|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC112268|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC117479|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC143949|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144042|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144043|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325116|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325119|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC045664|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK094064|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_001166496|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AF239919|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AL162079|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK296688|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK312500|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC026317|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK303603|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AJ438943|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_003051|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)	0.831285	CTCF.p2:3:0.814
chr11	32195101	32195216	reg1008475.p1	11.448	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	-82459	+	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	-82681	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-355680	-	AK093168 BC032861 NM_001198551 NM_001198552	257202	-	TSC_hg19_v1_chr11_-_32456950 BC046461	261781	-	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	261911	-	BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1##BC046461|WT1|7490|Wilms tumor 1##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1	0.636927	CTCF.p2:16:0.637
chr20	2723841	2723984	reg1010556.p1	11.448	+	TSC_hg19_v1_chr20_+_2673520 AB037863 NM_001110514	-50230	+	TSC_hg19_v1_chr20_-_2644844 BC019037 CU674954 DQ892561 DQ895776 DQ895816 EU831924 EU832019 AK001905 BC001960 NM_006899 NM_174855 NM_174856 AK309488 AK315641 AK300485	-79078	-	AL050094 TSC_hg19_v1_chr20_-_2641583	-82376	-	AK027661 BC032692 AY358956 TSC_hg19_v1_chr20_-_2781253	57331	-	AK075527 BC063430 AK075508 TSC_hg19_v1_chr20_-_2781274 AK315027 NM_001184699 NM_019609	57371	-	AK129653 AK312218 BC014591 NM_080739 AL713708	71734	+	AB037863|EBF4|57593|early B-cell factor 4##NM_001110514|EBF4|57593|early B-cell factor 4##BC019037|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ892561|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ895776|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ895816|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##EU831924|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##EU832019|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK001905|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##BC001960|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_006899|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_174855|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_174856|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK309488|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK315641|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK300485|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK027661|CPXM1|56265|carboxypeptidase X (M14 family), member 1##BC032692|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AY358956|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK075527|CPXM1|56265|carboxypeptidase X (M14 family), member 1##BC063430|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK075508|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK315027|CPXM1|56265|carboxypeptidase X (M14 family), member 1##NM_001184699|CPXM1|56265|carboxypeptidase X (M14 family), member 1##NM_019609|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK312218|C20orf141|128653|chromosome 20 open reading frame 141##BC014591|C20orf141|128653|chromosome 20 open reading frame 141##NM_080739|C20orf141|128653|chromosome 20 open reading frame 141##AL713708|C20orf141|128653|chromosome 20 open reading frame 141	0.976004	CTCF.p2:1:0.976
chr1	100274334	100274491	reg1009084.p1	11.447	+	AK131302 NM_001013660	-43064	-	NM_017734 AF262379 AL390971 AJ312214 BC012570 AK000278 AL390973	-162845	+	TSC_hg19_v1_chr1_+_99730067 AF357013 AK300361	-544327	+	TSC_hg19_v1_chr1_+_100315653 NM_000642 U84007	41231	+	TSC_hg19_v1_chr1_+_100315681 AB621804	41286	+	TSC_hg19_v1_chr1_+_100315814 BC078663 NM_000028 NM_000643 NM_000644 U84008 U84009 U84010	41513	+	AK131302|FRRS1|391059|ferric-chelate reductase 1##NM_001013660|FRRS1|391059|ferric-chelate reductase 1##NM_017734|PALMD|54873|palmdelphin##AF262379|PALMD|54873|palmdelphin##AL390971|PALMD|54873|palmdelphin##AJ312214|PALMD|54873|palmdelphin##BC012570|PALMD|54873|palmdelphin##AK000278|PALMD|54873|palmdelphin##AL390973|PALMD|54873|palmdelphin##AF357013|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK300361|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_000642|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##U84007|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##BC078663|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##NM_000028|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##NM_000643|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##NM_000644|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##U84008|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##U84009|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##U84010|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	0.573909	CTCF.p2:-22:0.574
chr3	194064791	194064901	reg1007212.p1	11.447	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	-210891	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	-210913	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-753681	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	7228	-	BC101064 BC101065 TSC_hg19_v1_chr3_-_194090471 AK125112 NM_001135057 NM_130830	25621	-	NM_004488	55148	-	AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2##BC101064|LRRC15|131578|leucine rich repeat containing 15##BC101065|LRRC15|131578|leucine rich repeat containing 15##AK125112|LRRC15|131578|leucine rich repeat containing 15##NM_001135057|LRRC15|131578|leucine rich repeat containing 15##NM_130830|LRRC15|131578|leucine rich repeat containing 15##NM_004488|GP5|2814|glycoprotein V (platelet)	0.998878	CTCF.p2:-8:0.999
chr7	19787511	19787625	reg1007433.p1	11.447	+	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	-38922	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	-602555	-	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	-630290	-	BX648384 NM_152774	24835	-	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	469412	-	AK295044 TSC_hg19_v1_chr7_+_20370337	582769	+	HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##AK295044|ITGB8|3696|integrin, beta 8	0.967126	CTCF.p2:0:0.967
chrX	153943331	153943462	reg1009240.p1	11.447	+	AJ012833 AM393026 AM393495 AM393696 AM393839 AB463462 BC002833 BC113998 BC114933 BC128045 AJ223041 AY679088 AY679089 AJ012834 AJ012835 AJ223040 NM_020994 NM_172377	-61592	-	AJ275978 AJ003149 BC130362 BC130364 NM_001327 NM_139250 U87459	-95941	-	NM_001327 NM_139250 U87459 BC130362 BC130364 AJ003149 AJ275978	-129914	+	TSC_hg19_v1_chrX_-_153979326 AB463697 AK126283 AY057989 NM_001081573 NM_080612 AK307927	35901	-	TSC_hg19_v1_chrX_-_153979807 AL832051 DQ656063	36430	-	TSC_hg19_v1_chrX_+_153991038 NM_001142463 NM_001363 BC009928	47632	+	AJ012833|CTAG2|30848|cancer/testis antigen 2##AM393026|CTAG2|30848|cancer/testis antigen 2##AM393495|CTAG2|30848|cancer/testis antigen 2##AM393696|CTAG2|30848|cancer/testis antigen 2##AM393839|CTAG2|30848|cancer/testis antigen 2##BC002833|CTAG2|30848|cancer/testis antigen 2##BC113998|CTAG2|30848|cancer/testis antigen 2##BC114933|CTAG2|30848|cancer/testis antigen 2##BC128045|CTAG2|30848|cancer/testis antigen 2##AJ223041|CTAG2|30848|cancer/testis antigen 2##AY679088|CTAG2|30848|cancer/testis antigen 2##AY679089|CTAG2|30848|cancer/testis antigen 2##AJ012834|CTAG2|30848|cancer/testis antigen 2##AJ012835|CTAG2|30848|cancer/testis antigen 2##AJ223040|CTAG2|30848|cancer/testis antigen 2##NM_020994|CTAG2|30848|cancer/testis antigen 2##NM_172377|CTAG2|30848|cancer/testis antigen 2##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AK126283|GAB3|139716|GRB2-associated binding protein 3##AY057989|GAB3|139716|GRB2-associated binding protein 3##NM_001081573|GAB3|139716|GRB2-associated binding protein 3##NM_080612|GAB3|139716|GRB2-associated binding protein 3##AK307927|GAB3|139716|GRB2-associated binding protein 3##AL832051|GAB3|139716|GRB2-associated binding protein 3##NM_001142463|DKC1|1736|dyskeratosis congenita 1, dyskerin##NM_001363|DKC1|1736|dyskeratosis congenita 1, dyskerin##BC009928|DKC1|1736|dyskeratosis congenita 1, dyskerin	0.454423	CTCF.p2:5:0.454
chr19	30349023	30349160	reg1009713.p1	11.446	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	-46190	+	TSC_hg19_v1_chr19_-_30206402 NM_031448	-142669	-	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	-142999	-	BC026184 NM_001252641	65459	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	84191	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	514289	+	AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536	0.998815	CTCF.p2:2:0.999
chr8	91583374	91583507	reg1010327.p1	11.446	+	AB529128 X06661 BC006478 AK054881 AK312491 BC020864 NM_004929	-488425	-	NM_001359 BC105080 BC105082 BC143669 TSC_hg19_v1_chr8_+_91013704 AK300069 L26050	-569791	+	TSC_hg19_v1_chr8_-_90996896 AK001017 AK289848 BC071590 BC040519 BX640816 NM_002485 AK312410	-586536	-	AK300583 AK123958 AL834364 TSC_hg19_v1_chr8_-_91657856	74358	-	TSC_hg19_v1_chr8_-_91657970 AY147881 NM_001008495 NM_001146273	74575	-	AF414126 TSC_hg19_v1_chr8_+_91803956 NM_022351 AK095533 BC068448 AY224210	220505	+	X06661|CALB1|793|calbindin 1, 28kDa##BC006478|CALB1|793|calbindin 1, 28kDa##AK054881|CALB1|793|calbindin 1, 28kDa##AK312491|CALB1|793|calbindin 1, 28kDa##BC020864|CALB1|793|calbindin 1, 28kDa##NM_004929|CALB1|793|calbindin 1, 28kDa##NM_001359|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105080|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105082|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC143669|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK300069|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##L26050|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK001017|NBN|4683|nibrin##AK289848|NBN|4683|nibrin##BC071590|NBN|4683|nibrin##BC040519|NBN|4683|nibrin##BX640816|NBN|4683|nibrin##NM_002485|NBN|4683|nibrin##AK312410|NBN|4683|nibrin##AK300583|TMEM64|169200|transmembrane protein 64##AK123958|TMEM64|169200|transmembrane protein 64##AL834364|TMEM64|169200|transmembrane protein 64##AY147881|TMEM64|169200|transmembrane protein 64##NM_001008495|TMEM64|169200|transmembrane protein 64##NM_001146273|TMEM64|169200|transmembrane protein 64##AF414126|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##NM_022351|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AK095533|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##BC068448|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AY224210|NECAB1|64168|N-terminal EF-hand calcium binding protein 1	0.715615	CTCF.p2:1:0.716
chr11	48329453	48329590	reg1009946.p1	11.445	+	NM_001004725	-1747	+	NM_001004726	-44109	+	BC136935 BC136936 NM_001004727	-62890	+	BC136853 BC136854 NM_001004702	16960	+	AB528861 NM_001005513	44477	-	BC140738 NM_001005512	180785	+	NM_001004725|OR4S1|256148|olfactory receptor, family 4, subfamily S, member 1##NM_001004726|OR4X1|390113|olfactory receptor, family 4, subfamily X, member 1##BC136935|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##BC136936|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##NM_001004727|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##BC136853|OR4C3|256144|olfactory receptor, family 4, subfamily C, member 3##BC136854|OR4C3|256144|olfactory receptor, family 4, subfamily C, member 3##NM_001004702|OR4C3|256144|olfactory receptor, family 4, subfamily C, member 3##NM_001005513|OR4C45|403257|olfactory receptor, family 4, subfamily C, member 45##BC140738|OR4A47|403253|olfactory receptor, family 4, subfamily A, member 47##NM_001005512|OR4A47|403253|olfactory receptor, family 4, subfamily A, member 47	0.971621	CTCF.p2:-2:0.972
chr2	70568441	70568571	reg1009739.p1	11.445	+	AM393139 AB528755 AK225148 BC026293 TSC_hg19_v1_chr2_-_70529198 AL833147 BC014975 AK225151 AK309543 AK315877 AK027574 NM_032822	-39300	-	TSC_hg19_v1_chr2_-_70520848 X85373 BC022432 NM_003096 BC106055	-47641	-	CR456918 AB464221 BC071880 TSC_hg19_v1_chr2_-_70520827 BC070166 BC066302 BC000070	-47695	-	AK309220 AK309066 CU675103 BT006833 AF149096 AF149097 AF149098 X70340 K03222 M31172 AK290151 AK312899 BC005308 TSC_hg19_v1_chr2_-_70780995	212302	-	NM_001099691 NM_003236	212640	-	BC065525 NM_001185054	426340	-	AM393139|FAM136A|84908|family with sequence similarity 136, member A##AK225148|FAM136A|84908|family with sequence similarity 136, member A##BC026293|FAM136A|84908|family with sequence similarity 136, member A##AL833147|FAM136A|84908|family with sequence similarity 136, member A##BC014975|FAM136A|84908|family with sequence similarity 136, member A##AK225151|FAM136A|84908|family with sequence similarity 136, member A##AK309543|FAM136A|84908|family with sequence similarity 136, member A##AK315877|FAM136A|84908|family with sequence similarity 136, member A##AK027574|FAM136A|84908|family with sequence similarity 136, member A##NM_032822|FAM136A|84908|family with sequence similarity 136, member A##X85373|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC022432|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##NM_003096|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC106055|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##CR456918|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC071880|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC070166|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC066302|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC000070|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##AK309220|TGFA|7039|transforming growth factor, alpha##AK309066|TGFA|7039|transforming growth factor, alpha##BT006833|TGFA|7039|transforming growth factor, alpha##AF149096|TGFA|7039|transforming growth factor, alpha##AF149097|TGFA|7039|transforming growth factor, alpha##AF149098|TGFA|7039|transforming growth factor, alpha##X70340|TGFA|7039|transforming growth factor, alpha##K03222|TGFA|7039|transforming growth factor, alpha##M31172|TGFA|7039|transforming growth factor, alpha##AK290151|TGFA|7039|transforming growth factor, alpha##AK312899|TGFA|7039|transforming growth factor, alpha##BC005308|TGFA|7039|transforming growth factor, alpha##NM_001099691|TGFA|7039|transforming growth factor, alpha##NM_003236|TGFA|7039|transforming growth factor, alpha##BC065525|ADD2|119|adducin 2 (beta)##NM_001185054|ADD2|119|adducin 2 (beta)	0.954257	CTCF.p2:-11:0.954
chr1	89948948	89949076	reg1010244.p1	11.444	+	NM_198460 AK131356	-119568	+	AY358953 AK090479 AF328727 AF430643 TSC_hg19_v1_chr1_-_89738544 BC031639 AF430642 NM_001134486 NM_052942	-210498	-	AK304245 AB527149 AF288814 AK131094 AL832576 BC070055 BC017889 AK312417 BC008421 NM_052941	-284441	-	NM_001134476 TSC_hg19_v1_chr1_+_89990414	41403	+	TSC_hg19_v1_chr1_+_89990454 BC060782 BC030607	41464	+	AF385436 NM_015350	75259	+	NM_198460|GBP6|163351|guanylate binding protein family, member 6##AK131356|GBP6|163351|guanylate binding protein family, member 6##AY358953|GBP5|115362|guanylate binding protein 5##AK090479|GBP5|115362|guanylate binding protein 5##AF328727|GBP5|115362|guanylate binding protein 5##AF430643|GBP5|115362|guanylate binding protein 5##BC031639|GBP5|115362|guanylate binding protein 5##AF430642|GBP5|115362|guanylate binding protein 5##NM_001134486|GBP5|115362|guanylate binding protein 5##NM_052942|GBP5|115362|guanylate binding protein 5##AK304245|GBP4|115361|guanylate binding protein 4##AF288814|GBP4|115361|guanylate binding protein 4##AK131094|GBP4|115361|guanylate binding protein 4##AL832576|GBP4|115361|guanylate binding protein 4##BC070055|GBP4|115361|guanylate binding protein 4##BC017889|GBP4|115361|guanylate binding protein 4##AK312417|GBP4|115361|guanylate binding protein 4##BC008421|GBP4|115361|guanylate binding protein 4##NM_052941|GBP4|115361|guanylate binding protein 4##NM_001134476|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC060782|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC030607|LRRC8B|23507|leucine rich repeat containing 8 family, member B##AF385436|LRRC8B|23507|leucine rich repeat containing 8 family, member B##NM_015350|LRRC8B|23507|leucine rich repeat containing 8 family, member B	0.998465	CTCF.p2:-11:0.998
chr20	19883918	19884044	reg1007466.p1	11.444	+	BC128065 NM_018993 TSC_hg19_v1_chr20_+_19870217 AB060339	-13754	+	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	-16838	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	-690528	+	TSC_hg19_v1_chr20_+_19915762 BC034698 AL136924	31768	+	TSC_hg19_v1_chr20_+_19955789 M37190	71878	+	TSC_hg19_v1_chr20_+_19997934 NM_016100 NM_181528	113952	+	BC128065|RIN2|54453|Ras and Rab interactor 2##NM_018993|RIN2|54453|Ras and Rab interactor 2##AB060339|RIN2|54453|Ras and Rab interactor 2##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2##AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##BC034698|RIN2|54453|Ras and Rab interactor 2##AL136924|RIN2|54453|Ras and Rab interactor 2##M37190|RIN2|54453|Ras and Rab interactor 2##NM_016100|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##NM_181528|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit	0.0	
chr9	998581	998761	reg1002237.p1	11.444	+	AF193873 TSC_hg19_v1_chr9_+_977425	-21266	+	NM_021240 BC113584 BC117245	-21706	+	AF130728 AY442914 AY442915 NM_021951 AK313594 AJ276801 AL162131 BC040847 EU446468 AB463577 CU691924	-156908	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	51673	+	TSC_hg19_v1_chr9_+_1050370 Y19052	51699	+	AF130729 NM_181872	51938	+	AF193873|DMRT3|58524|doublesex and mab-3 related transcription factor 3##NM_021240|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC113584|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC117245|DMRT3|58524|doublesex and mab-3 related transcription factor 3##AF130728|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442914|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442915|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021951|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AK313594|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AJ276801|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AL162131|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BC040847|DMRT1|1761|doublesex and mab-3 related transcription factor 1##EU446468|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2	1.997858	CTCF.p2:23:0.999	CTCF.p2:-74:0.999
chrX	43817865	43817993	reg1007880.p2	11.444	+	AK294306 M69177 TSC_hg19_v1_chrX_-_43741666 BC022494 AK310458 AK312679 NM_000898	-76262	-	TSC_hg19_v1_chrX_-_43741500 S62734 CU692654 GQ129432 GQ129433	-76406	-	TSC_hg19_v1_chrX_+_43515544 AK293926 AK291769 BC008064 CU675911 DQ890676 DQ893857 BT006651	-302367	+	NM_000266	14991	-	CU689086 AK292967 AK026496 AK297714 BC031039 NM_025184 AK291187	385019	-	TSC_hg19_v1_chrX_-_44402101 BC035015 BC042813 NM_173794	584225	-	AK294306|MAOB|4129|monoamine oxidase B##M69177|MAOB|4129|monoamine oxidase B##BC022494|MAOB|4129|monoamine oxidase B##AK310458|MAOB|4129|monoamine oxidase B##AK312679|MAOB|4129|monoamine oxidase B##NM_000898|MAOB|4129|monoamine oxidase B##S62734|MAOB|4129|monoamine oxidase B##GQ129432|MAOB|4129|monoamine oxidase B##GQ129433|MAOB|4129|monoamine oxidase B##AK293926|MAOA|4128|monoamine oxidase A##AK291769|MAOA|4128|monoamine oxidase A##BC008064|MAOA|4128|monoamine oxidase A##DQ890676|MAOA|4128|monoamine oxidase A##DQ893857|MAOA|4128|monoamine oxidase A##BT006651|MAOA|4128|monoamine oxidase A##NM_000266|NDP|4693|Norrie disease (pseudoglioma)##AK292967|EFHC2|80258|EF-hand domain (C-terminal) containing 2##AK026496|EFHC2|80258|EF-hand domain (C-terminal) containing 2##AK297714|EFHC2|80258|EF-hand domain (C-terminal) containing 2##BC031039|EFHC2|80258|EF-hand domain (C-terminal) containing 2##NM_025184|EFHC2|80258|EF-hand domain (C-terminal) containing 2##AK291187|EFHC2|80258|EF-hand domain (C-terminal) containing 2##BC035015|FUNDC1|139341|FUN14 domain containing 1##BC042813|FUNDC1|139341|FUN14 domain containing 1##NM_173794|FUNDC1|139341|FUN14 domain containing 1	0.810961	CTCF.p2:-2:0.811
chr1	17820868	17820999	reg1007732.p1	11.442	+	TSC_hg19_v1_chr1_-_17766260 NM_018715	-54662	-	TSC_hg19_v1_chr1_-_17766174 AB040903	-54758	-	TSC_hg19_v1_chr1_-_17765069 BC053908 NM_001136204	-55872	-	TSC_hg19_v1_chr1_+_17846826 AK129959	25890	+	TSC_hg19_v1_chr1_+_17866365 AB046846 NM_018125 AK311076	45427	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	86082	+	NM_018715|RCC2|55920|regulator of chromosome condensation 2##AB040903|RCC2|55920|regulator of chromosome condensation 2##BC053908|RCC2|55920|regulator of chromosome condensation 2##NM_001136204|RCC2|55920|regulator of chromosome condensation 2##AK129959|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AB046846|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_018125|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK311076|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like	0.995897	CTCF.p2:-2:0.996
chr1	2479563	2479693	reg1008569.p1	11.442	+	BC087840 DQ272660 NM_001010926	-17945	-	TSC_hg19_v1_chr1_-_2458040 AL442072 BC043496 AK001644 AK223546 AK303127 AK309860 NM_018216 AK295301	-21564	-	DQ176850 NM_014638 BC144620	-71871	+	AK300515 NM_003820 U70321 AK303468 BC029848 BC002794 BC018882 U81232 AF153978 AK310076 AB208808 AY358879 CU678202 AB590572 DQ893000 DQ896755 AF373877 AF373878 CR456909	8325	+	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	38560	+	TSC_hg19_v1_chr1_+_2518534 AK094901	38886	+	BC087840|HES5|388585|hairy and enhancer of split 5 (Drosophila)##DQ272660|HES5|388585|hairy and enhancer of split 5 (Drosophila)##NM_001010926|HES5|388585|hairy and enhancer of split 5 (Drosophila)##AL442072|PANK4|55229|pantothenate kinase 4##BC043496|PANK4|55229|pantothenate kinase 4##AK001644|PANK4|55229|pantothenate kinase 4##AK223546|PANK4|55229|pantothenate kinase 4##AK303127|PANK4|55229|pantothenate kinase 4##AK309860|PANK4|55229|pantothenate kinase 4##NM_018216|PANK4|55229|pantothenate kinase 4##AK295301|PANK4|55229|pantothenate kinase 4##DQ176850|PLCH2|9651|phospholipase C, eta 2##NM_014638|PLCH2|9651|phospholipase C, eta 2##BC144620|PLCH2|9651|phospholipase C, eta 2##AK300515|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##NM_003820|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U70321|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK303468|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC029848|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC002794|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC018882|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U81232|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF153978|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK310076|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AB208808|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AY358879|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ893000|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ896755|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373877|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373878|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##CR456909|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B##AK094901|FAM213B|127281|family with sequence similarity 213, member B	0.9999	CTCF.p2:6:1.000
chr14	102310057	102310213	reg1009948.p1	11.442	+	AB451341 CU677587 D26445 AB463199 L42375 TSC_hg19_v1_chr14_+_102276338	-33826	+	TSC_hg19_v1_chr14_+_102276171 NM_002719 NM_178586 NM_178587 AK295449 AK315072 Z69030 U37352 BC016183	-33952	+	NM_001161725 NM_001161726 TSC_hg19_v1_chr14_+_102228166 AL834350 BC051442 AK131391 AK302470	-81949	+	TSC_hg19_v1_chr14_+_102430876 AB290157 NM_001376 AK299878	120693	+	TSC_hg19_v1_chr14_+_102430909 AB002323 AB527134	120826	+	TSC_hg19_v1_chr14_-_102553382 AJ890083 X07270 BC017233 BC001695 AK129557 AK291115 AK291607 AK300126 AK310595 BC121062 X15183	243229	-	AB451341|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##D26445|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##L42375|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_002719|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178586|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178587|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK315072|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##Z69030|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##U37352|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC016183|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_001161725|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_001161726|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AL834350|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC051442|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK131391|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK302470|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AB290157|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##NM_001376|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AK299878|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AB002323|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AJ890083|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##X07270|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC017233|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC001695|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK129557|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK291115|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK291607|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK300126|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK310595|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC121062|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##X15183|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1	0.785835	CTCF.p2:-9:0.299	CTCF.p2:-13:0.487
chr3	116738094	116738216	reg1007740.p1	11.442	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-573782	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-573824	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-1395736	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	2015378	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	2015528	-	AK097667 NM_152538 AK292387	2126742	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.0	
chr20	3199268	3199389	reg1006880.p2	11.441	+	NM_033453 NM_181493 AF219116 TSC_hg19_v1_chr20_+_3190132 AF063607 AF334680 AB062127 AK309165 AF026816 EF199841 EF213026 BC010138 DQ896125 EU176384	-9204	+	TSC_hg19_v1_chr20_-_3185325 BC000643 NM_023935 BC007957 BC011851 AK310809	-14022	-	TSC_hg19_v1_chr20_-_3154196 BC038860	-45090	-	BC110540 BC110541 AF336127 NM_032034	19030	-	AK296508 NM_001174090	19506	-	AK091157 AK296760 AX746815 NM_001174089	20532	-	NM_033453|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##NM_181493|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##AF219116|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##AF063607|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##AF334680|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##AB062127|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##AK309165|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##AF026816|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##EF199841|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##EF213026|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##BC010138|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##DQ896125|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##EU176384|ITPA|3704|inosine triphosphatase (nucleoside triphosphate pyrophosphatase)##BC000643|DDRGK1|65992|DDRGK domain containing 1##NM_023935|DDRGK1|65992|DDRGK domain containing 1##BC007957|DDRGK1|65992|DDRGK domain containing 1##BC011851|DDRGK1|65992|DDRGK domain containing 1##AK310809|DDRGK1|65992|DDRGK domain containing 1##BC038860|ProSAPiP1|9762|ProSAPiP1 protein##BC110540|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##BC110541|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##AF336127|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##NM_032034|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##AK296508|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##NM_001174090|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##AK091157|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##AK296760|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##NM_001174089|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11	0.844831	CTCF.p2:-8:0.845
chr2	196525115	196525257	reg1010650.p1	11.441	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	-3278	+	BC029413 NM_001127257 CR749813	-3611	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-3465557	-	AB463018 AF327442 AK094515 NM_018897 AB023161	408309	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	511093	-	TSC_hg19_v1_chr2_-_197036310 NM_004226	511132	-	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##NM_004226|STK17B|9262|serine/threonine kinase 17b	0.884941	CTCF.p2:22:0.885
chr7	25429235	25429366	reg1009057.p1	11.441	+	AB040290 AF330057 AF440392 NM_022150	-161220	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-209429	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-264360	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	762633	+	TSC_hg19_v1_chr7_-_26232151 BX538099	802851	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	811041	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.962864	CTCF.p2:23:0.963
chr16	57634398	57634520	reg1009642.p1	11.440	+	TSC_hg19_v1_chr16_+_57576577 BC032401 NM_153837	-57871	+	TSC_hg19_v1_chr16_+_57576554 AK303661 AK292783 AK160368 AY358447 AK301357	-57905	+	BC008285 BC009941 NM_033212	-63994	-	AK131550 TSC_hg19_v1_chr16_+_57653651 CR936747	19196	+	NM_001145770 NM_005682 AK075270 AY358400	19489	+	AK312405 NM_001145771 NM_001145772 NM_001145773 NM_201524 NM_201525 TSC_hg19_v1_chr16_+_57662543 AK075555 AK299110	27995	+	BC032401|GPR114|221188|G protein-coupled receptor 114##NM_153837|GPR114|221188|G protein-coupled receptor 114##AK303661|GPR114|221188|G protein-coupled receptor 114##AK292783|GPR114|221188|G protein-coupled receptor 114##AK160368|GPR114|221188|G protein-coupled receptor 114##AY358447|GPR114|221188|G protein-coupled receptor 114##AK301357|GPR114|221188|G protein-coupled receptor 114##BC008285|CCDC102A|92922|coiled-coil domain containing 102A##BC009941|CCDC102A|92922|coiled-coil domain containing 102A##NM_033212|CCDC102A|92922|coiled-coil domain containing 102A##AK131550|GPR56|9289|G protein-coupled receptor 56##CR936747|GPR56|9289|G protein-coupled receptor 56##NM_001145770|GPR56|9289|G protein-coupled receptor 56##NM_005682|GPR56|9289|G protein-coupled receptor 56##AK075270|GPR56|9289|G protein-coupled receptor 56##AY358400|GPR56|9289|G protein-coupled receptor 56##AK312405|GPR56|9289|G protein-coupled receptor 56##NM_001145771|GPR56|9289|G protein-coupled receptor 56##NM_001145772|GPR56|9289|G protein-coupled receptor 56##NM_001145773|GPR56|9289|G protein-coupled receptor 56##NM_201524|GPR56|9289|G protein-coupled receptor 56##NM_201525|GPR56|9289|G protein-coupled receptor 56##AK075555|GPR56|9289|G protein-coupled receptor 56##AK299110|GPR56|9289|G protein-coupled receptor 56	0.995261	CTCF.p2:-4:0.995
chr6	114230534	114230680	reg1008903.p1	11.440	+	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	-51873	+	AK122906 NM_001013734	-1562076	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1654712	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	61665	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	61729	-	AF503292 NM_153612 BC093911 BC093913	153417	-	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	0.997458	CTCF.p2:16:0.997
chr16	85928045	85928180	reg1010162.p1	11.439	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-94777	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-94807	+	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	-94879	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	4674	+	TSC_hg19_v1_chr16_-_86542463 AK091834	614352	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	616044	+	BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1	0.428157	CTCF.p2:0:0.428
chrX	12919720	12919851	reg1009607.p1	11.439	+	AK313858 BC033651 NM_016562 AF240467 AF245702	-34587	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	-110217	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	-110288	+	AK314240 NM_138636 AF246971 AY358296 BC101074 BC101075 BC101076 BC101077 AF245703	4972	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	73455	+	TSC_hg19_v1_chrX_+_12994293 BC104464 BC104465 BT007090 X02493	74558	+	AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK314240|TLR8|51311|toll-like receptor 8##NM_138636|TLR8|51311|toll-like receptor 8##AF246971|TLR8|51311|toll-like receptor 8##AY358296|TLR8|51311|toll-like receptor 8##BC101074|TLR8|51311|toll-like receptor 8##BC101075|TLR8|51311|toll-like receptor 8##BC101076|TLR8|51311|toll-like receptor 8##BC101077|TLR8|51311|toll-like receptor 8##AF245703|TLR8|51311|toll-like receptor 8##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked##BC104464|TMSB4X|7114|thymosin beta 4, X-linked##BC104465|TMSB4X|7114|thymosin beta 4, X-linked##BT007090|TMSB4X|7114|thymosin beta 4, X-linked##X02493|TMSB4X|7114|thymosin beta 4, X-linked	0.99836	CTCF.p2:6:0.998
chr7	148762986	148763130	reg1009546.p1	11.438	+	TSC_hg19_v1_chr7_-_148725766 NM_004911	-37286	-	BC006344 BC011754 AK313299 TSC_hg19_v1_chr7_-_148725753	-37315	-	CU674214 DQ893573 DQ894347 TSC_hg19_v1_chr7_-_148725561 BC000425 BC001928 J05016 AK290971	-37503	-	AB463377 AM392873 AM392921 TSC_hg19_v1_chr7_-_148787811 BC109245 BC128392 AL834510 AK297472	24714	-	TSC_hg19_v1_chr7_-_148787844 BX647929 AK095701	24775	-	TSC_hg19_v1_chr7_-_148787872 NM_152411	24842	-	NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4##BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4##BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4##AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4##DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4##DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4##BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4##BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4##AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4##AM392873|ZNF786|136051|zinc finger protein 786##AM392921|ZNF786|136051|zinc finger protein 786##BC109245|ZNF786|136051|zinc finger protein 786##BC128392|ZNF786|136051|zinc finger protein 786##AL834510|ZNF786|136051|zinc finger protein 786##AK297472|ZNF786|136051|zinc finger protein 786##BX647929|ZNF786|136051|zinc finger protein 786##AK095701|ZNF786|136051|zinc finger protein 786##NM_152411|ZNF786|136051|zinc finger protein 786	0.659804	CTCF.p2:9:0.524
chr13	39719199	39719338	reg1009186.p1	11.437	+	TSC_hg19_v1_chr13_+_39612534 AL833329 NM_001012754 NM_001017370 BX648122 BC052492 BC140877 BC140878 CR749318 AK300260 AK299198 BX647872	-106733	+	TSC_hg19_v1_chr13_-_39612251 NM_025138 NM_170719	-107015	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	-107067	-	AF098807 BC017824 TSC_hg19_v1_chr13_-_40177268	457976	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	458059	-	NM_005780 TSC_hg19_v1_chr13_-_40177356	458094	-	AL833329|NHLRC3|387921|NHL repeat containing 3##NM_001012754|NHLRC3|387921|NHL repeat containing 3##NM_001017370|NHLRC3|387921|NHL repeat containing 3##BX648122|NHLRC3|387921|NHL repeat containing 3##BC052492|NHLRC3|387921|NHL repeat containing 3##BC140877|NHLRC3|387921|NHL repeat containing 3##BC140878|NHLRC3|387921|NHL repeat containing 3##CR749318|NHLRC3|387921|NHL repeat containing 3##AK300260|NHLRC3|387921|NHL repeat containing 3##AK299198|NHLRC3|387921|NHL repeat containing 3##BX647872|NHLRC3|387921|NHL repeat containing 3##NM_025138|PROSER1|80209|proline and serine rich 1##NM_170719|PROSER1|80209|proline and serine rich 1##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1##AF098807|LHFP|10186|lipoma HMGIC fusion partner##BC017824|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##NM_005780|LHFP|10186|lipoma HMGIC fusion partner	0.114399	
chr16	2689204	2689325	reg1008309.p1	11.437	+	AK096394 TSC_hg19_v1_chr16_+_2653445 BC093998 BC111952 AK291606 BC062576 BC036664 BC056242 BC105289 BC080650	-35847	+	BC033494 TSC_hg19_v1_chr16_+_2588066 AB463382 DQ892297 DQ895496 EU832784 GQ129441 CU689632 CR536517 BC040324	-101157	+	AK131060 AK222581 AK293900 TSC_hg19_v1_chr16_+_2588021 AF017995 Y15056	-101229	+	BC063714 TSC_hg19_v1_chr16_-_2723400 AK091794 AX747190 BC043252	34141	-	TSC_hg19_v1_chr16_+_2732524 NM_018992 AK000047	43235	+	TSC_hg19_v1_chr16_+_2732528 BC007314	43327	+	AK096394|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC093998|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC111952|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##AK291606|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC062576|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC036664|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC056242|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC105289|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC080650|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC033494|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##DQ892297|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##DQ895496|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##EU832784|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##GQ129441|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##CR536517|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##BC040324|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK131060|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK222581|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK293900|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AF017995|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##Y15056|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK091794|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##AX747190|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##BC043252|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##NM_018992|KCTD5|54442|potassium channel tetramerisation domain containing 5##AK000047|KCTD5|54442|potassium channel tetramerisation domain containing 5##BC007314|KCTD5|54442|potassium channel tetramerisation domain containing 5	0.979903	CTCF.p2:-5:0.980
chr19	42924311	42924411	reg1005789.p1	11.437	+	TSC_hg19_v1_chr19_+_42901325 AK311181	-23049	+	BC101197 BC101198 AB049591 AK312080 NM_032488	-29930	-	AB011541 BC153880 NM_001410 TSC_hg19_v1_chr19_+_42829786	-94575	+	TSC_hg19_v1_chr19_-_42928157 BC029301	3852	-	AK309893 AK292482 BC029961 BC070041 NM_005357 U40002	7177	-	BC093946 BC112095 AK292985 AY358433 NM_198477 AY598464	22763	-	BC101197|CNFN|84518|cornifelin##BC101198|CNFN|84518|cornifelin##AB049591|CNFN|84518|cornifelin##AK312080|CNFN|84518|cornifelin##NM_032488|CNFN|84518|cornifelin##AB011541|MEGF8|1954|multiple EGF-like-domains 8##BC153880|MEGF8|1954|multiple EGF-like-domains 8##NM_001410|MEGF8|1954|multiple EGF-like-domains 8##BC029301|LIPE|3991|lipase, hormone-sensitive##AK292482|LIPE|3991|lipase, hormone-sensitive##BC029961|LIPE|3991|lipase, hormone-sensitive##BC070041|LIPE|3991|lipase, hormone-sensitive##NM_005357|LIPE|3991|lipase, hormone-sensitive##U40002|LIPE|3991|lipase, hormone-sensitive##BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17##BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17##NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17	0.99827	CTCF.p2:-19:0.998
chr2	216898820	216898962	reg1010766.p1	11.437	+	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	-20555	-	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-598109	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-598371	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	47653	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	47801	+	TSC_hg19_v1_chr2_+_216974084 NM_021141	75161	+	AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169##NM_021141|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)	0.998195	CTCF.p2:0:0.998
chr3	21525929	21526062	reg1010780.p1	11.437	+	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-1298321	-	BC070075 TSC_hg19_v1_chr3_+_20081907 BC060823 AB527402	-1444085	+	NM_003884 U57317	-1444472	+	AK026072 NM_024697	266820	-	AK310298 TSC_hg19_v1_chr3_-_22414124	888139	-	TSC_hg19_v1_chr3_+_23244600 AK307075	1718588	+	AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC070075|KAT2B|8850|K(lysine) acetyltransferase 2B##BC060823|KAT2B|8850|K(lysine) acetyltransferase 2B##NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B##U57317|KAT2B|8850|K(lysine) acetyltransferase 2B##AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AK310298|ZNF385D|79750|zinc finger protein 385D##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2	1.051585	CTCF.p2:5:0.997
chr17	62773076	62773215	reg1009674.p1	11.436	+	TSC_hg19_v1_chr17_-_62658414 CR936721 NM_022739	-114780	-	TSC_hg19_v1_chr17_-_62658187 AY014180	-114963	-	AF310676 AB385561 AF301463 BC051283 BC093876 BC111945 TSC_hg19_v1_chr17_-_62658136	-115078	-	BC032382 TSC_hg19_v1_chr17_-_62777683 AK055342 BC120976 BC120977	4577	-	TSC_hg19_v1_chr17_-_62833238 AK301174 AK304173	60088	-	TSC_hg19_v1_chr17_-_62833261 BC034693 BC041324	60109	-	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC032382|LOC146880|146880|Rho GTPase activating protein 27 pseudogene##AK055342|LOC146880|146880|Rho GTPase activating protein 27 pseudogene##BC120976|LOC146880|146880|Rho GTPase activating protein 27 pseudogene##BC120977|LOC146880|146880|Rho GTPase activating protein 27 pseudogene##AK301174|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene##AK304173|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene##BC034693|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene	0.553069	CTCF.p2:-1:0.553
chr11	7593022	7593146	reg1007426.p1	11.434	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	-57841	+	NM_003621 BC021714 TSC_hg19_v1_chr11_+_7535171	-57981	+	NM_198474 BX647908 BC092488 TSC_hg19_v1_chr11_+_7506763 AK298137 BC035895 AK297778	-86367	+	AK296718 TSC_hg19_v1_chr11_+_7618421	25334	+	AB209000 BC001346 AF169802 NM_016229	101668	-	NM_198185	134856	-	AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##NM_003621|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##BC021714|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##NM_198474|OLFML1|283298|olfactomedin-like 1##BX647908|OLFML1|283298|olfactomedin-like 1##BC092488|OLFML1|283298|olfactomedin-like 1##AK298137|OLFML1|283298|olfactomedin-like 1##BC035895|OLFML1|283298|olfactomedin-like 1##AK297778|OLFML1|283298|olfactomedin-like 1##AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AB209000|CYB5R2|51700|cytochrome b5 reductase 2##BC001346|CYB5R2|51700|cytochrome b5 reductase 2##AF169802|CYB5R2|51700|cytochrome b5 reductase 2##NM_016229|CYB5R2|51700|cytochrome b5 reductase 2##NM_198185|OVCH2|341277|ovochymase 2 (gene/pseudogene)	0.702848	CTCF.p2:-1:0.703
chr2	218031071	218031226	reg1009568.p1	11.434	+	BC029516 NM_003284	-306367	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-470888	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-471582	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	777633	-	AK001785 TSC_hg19_v1_chr2_-_218843551	812398	-	TSC_hg19_v1_chr2_-_218867719 AK309785	836575	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.99804	CTCF.p2:9:0.998
chr4	38063769	38063919	reg1010383.p1	11.434	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-84827	+	AF095288 BC069114 BC069400 NM_006607	-101789	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-171055	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	601982	+	AF289565 TSC_hg19_v1_chr4_-_38666549	602645	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	720755	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.962555	CTCF.p2:-21:0.963
chr16	89707720	89707842	reg1008384.p1	11.433	+	D13138 DQ890714 EU832130 EU832223 AB590480 BT006664 CR457404 TSC_hg19_v1_chr16_+_89696823	-10982	+	TSC_hg19_v1_chr16_+_89696677 BC017023	-11096	+	J05257 NM_004413	-20782	+	BC132711 BC132713 BC007527 AF281063 TSC_hg19_v1_chr16_-_89724098 D38554 AK302055	16279	-	TSC_hg19_v1_chr16_-_89724128 NM_001083314 NM_002768 U58048	16408	-	TSC_hg19_v1_chr16_+_89724243 AK056168 BC148299 NM_153025 AK128803 AK303024 BC045670	16455	+	D13138|DPEP1|1800|dipeptidase 1 (renal)##DQ890714|DPEP1|1800|dipeptidase 1 (renal)##EU832130|DPEP1|1800|dipeptidase 1 (renal)##EU832223|DPEP1|1800|dipeptidase 1 (renal)##BT006664|DPEP1|1800|dipeptidase 1 (renal)##CR457404|DPEP1|1800|dipeptidase 1 (renal)##BC017023|DPEP1|1800|dipeptidase 1 (renal)##J05257|DPEP1|1800|dipeptidase 1 (renal)##NM_004413|DPEP1|1800|dipeptidase 1 (renal)##BC132711|CHMP1A|5119|charged multivesicular body protein 1A##BC132713|CHMP1A|5119|charged multivesicular body protein 1A##BC007527|CHMP1A|5119|charged multivesicular body protein 1A##AF281063|CHMP1A|5119|charged multivesicular body protein 1A##D38554|CHMP1A|5119|charged multivesicular body protein 1A##AK302055|CHMP1A|5119|charged multivesicular body protein 1A##NM_001083314|CHMP1A|5119|charged multivesicular body protein 1A##NM_002768|CHMP1A|5119|charged multivesicular body protein 1A##U58048|CHMP1A|5119|charged multivesicular body protein 1A##AK056168|C16orf55|124045|chromosome 16 open reading frame 55##BC148299|C16orf55|124045|chromosome 16 open reading frame 55##NM_153025|C16orf55|124045|chromosome 16 open reading frame 55##AK128803|C16orf55|124045|chromosome 16 open reading frame 55##AK303024|C16orf55|124045|chromosome 16 open reading frame 55##BC045670|C16orf55|124045|chromosome 16 open reading frame 55	0.694155	CTCF.p2:5:0.694
chr7	150595689	150595798	reg1008121.p1	11.433	+	TSC_hg19_v1_chr7_+_150549604 U11863 AK092514 AK296638 AK307278 AK314806 BC014093 M55602	-46131	+	TSC_hg19_v1_chr7_+_150549567 U11862 NM_001091	-46192	+	BC004358 BC014586 NM_014020 AK097304	-97338	-	TSC_hg19_v1_chr7_-_150652893 BC127672 BC127673 BC080563 NM_001204798 NM_172057 DQ120125	57184	-	TSC_hg19_v1_chr7_-_150675385 DQ525913 NM_000238 NM_172056	79626	-	NM_000603 BC063294 AK300390	92424	+	U11863|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK092514|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK296638|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK314806|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##BC014093|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##M55602|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##U11862|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##NM_001091|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##BC004358|TMEM176B|28959|transmembrane protein 176B##BC014586|TMEM176B|28959|transmembrane protein 176B##NM_014020|TMEM176B|28959|transmembrane protein 176B##AK097304|TMEM176B|28959|transmembrane protein 176B##BC127673|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_001204798|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172057|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##DQ120125|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##DQ525913|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_000238|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172056|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	0.998767	CTCF.p2:2:0.999
chr7	38145618	38145758	reg1008795.p1	11.433	+	NM_001242948 AK309180	-184761	+	BC000686 AK290885 TSC_hg19_v1_chr7_+_37960509 DQ914439 AJ250475	-185135	+	AY027862 NM_001242946 NM_017549 TSC_hg19_v1_chr7_+_37960259 BC018299	-185465	+	NM_032016 AK315404 TSC_hg19_v1_chr7_+_38217846	72140	+	TSC_hg19_v1_chr7_+_38217932 AK091579 AX747072 AJ492267 AY358645 BC005959	72270	+	BC062761 BC105589 AF151103 NM_001003799 NM_001003806	167551	-	NM_001242948|EPDR1|54749|ependymin related protein 1 (zebrafish)##AK309180|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC000686|EPDR1|54749|ependymin related protein 1 (zebrafish)##AK290885|EPDR1|54749|ependymin related protein 1 (zebrafish)##DQ914439|EPDR1|54749|ependymin related protein 1 (zebrafish)##AJ250475|EPDR1|54749|ependymin related protein 1 (zebrafish)##AY027862|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_001242946|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_017549|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC018299|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_032016|STARD3NL|83930|STARD3 N-terminal like##AK315404|STARD3NL|83930|STARD3 N-terminal like##AK091579|STARD3NL|83930|STARD3 N-terminal like##AJ492267|STARD3NL|83930|STARD3 N-terminal like##AY358645|STARD3NL|83930|STARD3 N-terminal like##BC005959|STARD3NL|83930|STARD3 N-terminal like##BC062761|TRGV9|6983|T cell receptor gamma variable 9##BC105589|TARP|445347|TCR gamma alternate reading frame protein##AF151103|TARP|445347|TCR gamma alternate reading frame protein##NM_001003799|TARP|445347|TCR gamma alternate reading frame protein##NM_001003806|TARP|445347|TCR gamma alternate reading frame protein	0.987919	CTCF.p2:-11:0.988
chr10	27179961	27180086	reg1007813.p1	11.432	+	TSC_hg19_v1_chr10_-_27149997 NM_001012750 NM_001012751 NM_001012752 NM_001178116 NM_001178119 NM_001178120 NM_001178121 NM_001178122 NM_001178123 NM_001178124 NM_001178125 NM_005470	-30018	-	TSC_hg19_v1_chr10_-_27149916 AF260262 AK298646 AK126803 AB040151	-30084	-	AB529081 FJ380057 FJ380058 FJ380059 TSC_hg19_v1_chr10_-_27149883 AF540955 AK296751 AF001628 AF006516 BC013238 U87166 AB209268 BC024254 AK291823	-30183	-	BC130453 TSC_hg19_v1_chr10_-_27389422 AB028997 AK001137 NM_014915	209361	-	AB384745 CU692788 BC019602 TSC_hg19_v1_chr10_-_27443272 AY358484 AK314372 AK291292	263184	-	TSC_hg19_v1_chr10_-_27443304 BC007795 BC023507 BC024032	263268	-	NM_001012750|ABI1|10006|abl-interactor 1##NM_001012751|ABI1|10006|abl-interactor 1##NM_001012752|ABI1|10006|abl-interactor 1##NM_001178116|ABI1|10006|abl-interactor 1##NM_001178119|ABI1|10006|abl-interactor 1##NM_001178120|ABI1|10006|abl-interactor 1##NM_001178121|ABI1|10006|abl-interactor 1##NM_001178122|ABI1|10006|abl-interactor 1##NM_001178123|ABI1|10006|abl-interactor 1##NM_001178124|ABI1|10006|abl-interactor 1##NM_001178125|ABI1|10006|abl-interactor 1##NM_005470|ABI1|10006|abl-interactor 1##AF260262|ABI1|10006|abl-interactor 1##AK298646|ABI1|10006|abl-interactor 1##AK126803|ABI1|10006|abl-interactor 1##AB040151|ABI1|10006|abl-interactor 1##FJ380057|ABI1|10006|abl-interactor 1##FJ380058|ABI1|10006|abl-interactor 1##FJ380059|ABI1|10006|abl-interactor 1##AF540955|ABI1|10006|abl-interactor 1##AK296751|ABI1|10006|abl-interactor 1##AF001628|ABI1|10006|abl-interactor 1##AF006516|ABI1|10006|abl-interactor 1##BC013238|ABI1|10006|abl-interactor 1##U87166|ABI1|10006|abl-interactor 1##AB209268|ABI1|10006|abl-interactor 1##BC024254|ABI1|10006|abl-interactor 1##AK291823|ABI1|10006|abl-interactor 1##BC130453|ANKRD26|22852|ankyrin repeat domain 26##AB028997|ANKRD26|22852|ankyrin repeat domain 26##AK001137|ANKRD26|22852|ankyrin repeat domain 26##NM_014915|ANKRD26|22852|ankyrin repeat domain 26##BC019602|YME1L1|10730|YME1-like 1 (S. cerevisiae)##AY358484|YME1L1|10730|YME1-like 1 (S. cerevisiae)##AK314372|YME1L1|10730|YME1-like 1 (S. cerevisiae)##AK291292|YME1L1|10730|YME1-like 1 (S. cerevisiae)##BC007795|YME1L1|10730|YME1-like 1 (S. cerevisiae)##BC023507|YME1L1|10730|YME1-like 1 (S. cerevisiae)##BC024032|YME1L1|10730|YME1-like 1 (S. cerevisiae)	0.996309	CTCF.p2:-19:0.996
chr12	121548246	121548375	reg1006806.p2	11.432	+	TSC_hg19_v1_chr12_-_121476781 HQ258301 AJ225089 AK314419 NM_003733 NM_198213 AK023956 BC117408 BC117410	-71527	-	TSC_hg19_v1_chr12_-_121454291 AK222630 AK299170 AK301566 AK022510 AK225162 NM_022895 AK307971	-94016	-	TSC_hg19_v1_chr12_-_121454230 BC014661	-94066	-	NM_002562 TSC_hg19_v1_chr12_+_121570744 AK294126 AK290405 AK296432 BC011913 BC121157 BC121158 AB209709 BC007679 AK090866 AK225163 AX746656 Y09561 GQ180122 DQ893457 DQ896337 AB590390 CU680114 AY847298 AY847299 AY847300 AY847301 AY847302 AY847303 AY847304 DQ399293	22391	+	U83993 NM_002560	99351	+	TSC_hg19_v1_chr12_+_121647931 AK293599 AK293660 AK297704 AK308549 AK308868 BC017458	99582	+	HQ258301|OASL|8638|2'-5'-oligoadenylate synthetase-like##AJ225089|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK314419|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_003733|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_198213|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK023956|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117408|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117410|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK222630|C12orf43|64897|chromosome 12 open reading frame 43##AK299170|C12orf43|64897|chromosome 12 open reading frame 43##AK301566|C12orf43|64897|chromosome 12 open reading frame 43##AK022510|C12orf43|64897|chromosome 12 open reading frame 43##AK225162|C12orf43|64897|chromosome 12 open reading frame 43##NM_022895|C12orf43|64897|chromosome 12 open reading frame 43##AK307971|C12orf43|64897|chromosome 12 open reading frame 43##BC014661|C12orf43|64897|chromosome 12 open reading frame 43##NM_002562|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK294126|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK290405|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK296432|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC011913|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121157|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121158|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AB209709|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC007679|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK090866|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK225163|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##Y09561|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##GQ180122|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ893457|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ896337|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847298|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847299|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847300|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847301|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847302|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847303|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847304|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ399293|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##U83993|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##NM_002560|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293599|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293660|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK297704|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308549|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308868|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC017458|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4	0.999794	CTCF.p2:6:1.000
chr1	75669512	75669643	reg1006695.p2	11.432	+	NM_001001933 BC040321	-75458	+	NM_001130042 NM_001130043 NM_001134759 NM_001889	-470486	-	NM_001162916 AK098237 BC071765 NM_138467 AK294264 AK299849 BC009514 AK311272 AB590606	-470697	+	AK128063 BC028743 BC034580 BC051740 NM_001130058 NM_152697 AK093170 AX747970	407204	-	AK299573 TSC_hg19_v1_chr1_-_76081791	412169	-	NM_000016 NM_001127328 TSC_hg19_v1_chr1_+_76190106	520497	+	NM_001001933|LHX8|431707|LIM homeobox 8##BC040321|LHX8|431707|LIM homeobox 8##NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001162916|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK098237|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC071765|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##NM_138467|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK294264|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK299849|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC009514|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK311272|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK128063|SLC44A5|204962|solute carrier family 44, member 5##BC028743|SLC44A5|204962|solute carrier family 44, member 5##BC034580|SLC44A5|204962|solute carrier family 44, member 5##BC051740|SLC44A5|204962|solute carrier family 44, member 5##NM_001130058|SLC44A5|204962|solute carrier family 44, member 5##NM_152697|SLC44A5|204962|solute carrier family 44, member 5##AK093170|SLC44A5|204962|solute carrier family 44, member 5##AK299573|SLC44A5|204962|solute carrier family 44, member 5##NM_000016|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##NM_001127328|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain	1.234568	CTCF.p2:6:0.974	CTCF.p2:-55:0.261
chr2	210842507	210842641	reg1009540.p1	11.432	+	TSC_hg19_v1_chr2_+_210636732 BC136690 BC136693	-205838	+	TSC_hg19_v1_chr2_+_210636707 AK090815 AX746629 NM_032504 NM_182587	-205866	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	-398180	+	TSC_hg19_v1_chr2_+_210867347 BC063135 AK056028 NM_006916	24762	+	BC016764 TSC_hg19_v1_chr2_+_210867366 AK093658 AX748246 AK291035 AK303184 AL833120 AK096199 AK308741 BC072401 BC005148 NM_199229 AB528699 EU831915 EU832009	24796	+	TSC_hg19_v1_chr2_-_211018294 AK074441 BC070141	175767	-	BC136690|UNC80|285175|unc-80 homolog (C. elegans)##BC136693|UNC80|285175|unc-80 homolog (C. elegans)##AK090815|UNC80|285175|unc-80 homolog (C. elegans)##NM_032504|UNC80|285175|unc-80 homolog (C. elegans)##NM_182587|UNC80|285175|unc-80 homolog (C. elegans)##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2##BC063135|RPE|6120|ribulose-5-phosphate-3-epimerase##AK056028|RPE|6120|ribulose-5-phosphate-3-epimerase##NM_006916|RPE|6120|ribulose-5-phosphate-3-epimerase##BC016764|RPE|6120|ribulose-5-phosphate-3-epimerase##AK093658|RPE|6120|ribulose-5-phosphate-3-epimerase##AK291035|RPE|6120|ribulose-5-phosphate-3-epimerase##AK303184|RPE|6120|ribulose-5-phosphate-3-epimerase##AL833120|RPE|6120|ribulose-5-phosphate-3-epimerase##AK096199|RPE|6120|ribulose-5-phosphate-3-epimerase##AK308741|RPE|6120|ribulose-5-phosphate-3-epimerase##BC072401|RPE|6120|ribulose-5-phosphate-3-epimerase##BC005148|RPE|6120|ribulose-5-phosphate-3-epimerase##NM_199229|RPE|6120|ribulose-5-phosphate-3-epimerase##EU831915|RPE|6120|ribulose-5-phosphate-3-epimerase##EU832009|RPE|6120|ribulose-5-phosphate-3-epimerase##AK074441|C2orf67|151050|chromosome 2 open reading frame 67##BC070141|C2orf67|151050|chromosome 2 open reading frame 67	0.95506	CTCF.p2:-15:0.955
chr10	127671043	127671153	reg1007238.p1	11.431	+	NM_145235 BC024189 CR627249 TSC_hg19_v1_chr10_+_127585124 AY358154 AK304407 DQ786222	-85942	+	TSC_hg19_v1_chr10_-_127585056 BC068471	-86068	-	AK001751 AY064250 AF427340 NM_018180	-101231	-	AK291629 TSC_hg19_v1_chr10_-_128076950	405853	-	AY358878 AF023476 AF023477 TSC_hg19_v1_chr10_-_128077049 AK127856	405933	-	TSC_hg19_v1_chr10_-_128077062 BC060804	405966	-	NM_145235|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##BC024189|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##CR627249|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##AY358154|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##BC068471|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AK001751|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AY064250|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AF427340|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##NM_018180|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AK291629|ADAM12|8038|ADAM metallopeptidase domain 12##AY358878|ADAM12|8038|ADAM metallopeptidase domain 12##AF023476|ADAM12|8038|ADAM metallopeptidase domain 12##AF023477|ADAM12|8038|ADAM metallopeptidase domain 12##AK127856|ADAM12|8038|ADAM metallopeptidase domain 12##BC060804|ADAM12|8038|ADAM metallopeptidase domain 12	0.845875	CTCF.p2:-23:0.846
chr13	24445860	24446023	reg1008103.p4	11.431	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	-292409	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-301486	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-438101	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	17075	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	17573	-	NM_001135816 BC142999	17651	+	BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.151087	
chr2	30937095	30937227	reg1005992.p1	11.431	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	-267013	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-482659	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-567285	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	93132	-	AK122747 NM_001253827	415336	-	AY358758 AK225808 TSC_hg19_v1_chr2_-_31361308	424137	-	BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AY358758|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AK225808|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.988511	CTCF.p2:-24:0.989
chr17	46413371	46413495	reg1006971.p1	11.430	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-228281	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-228448	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-234612	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	94105	-	TSC_hg19_v1_chr17_-_46507604 BC039040	94184	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	194838	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.958778	CTCF.p2:10:0.959
chr4	103178997	103179112	reg1009179.p1	11.429	+	NM_001083907 TSC_hg19_v1_chr4_+_102734998 AK000713	-444046	+	TSC_hg19_v1_chr4_+_102711886 BC032241 AK292133 AL834291 EU051376 AB587395	-467119	+	NM_001127507 NM_017935 TSC_hg19_v1_chr4_+_102711808	-467258	+	AK027652 NM_001135148	66414	-	CU680230 DQ892212 DQ895407 TSC_hg19_v1_chr4_-_103265863	86814	-	TSC_hg19_v1_chr4_-_103266365 AB040120 NM_022154 AK304274	87272	-	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##BC032241|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK292133|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AL834291|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##EU051376|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_001127507|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_017935|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK027652|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_001135148|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##DQ892212|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##DQ895407|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	0.751549	CTCF.p2:-6:0.752
chr7	73441278	73441373	reg1007287.p2	11.429	+	AY372053 BC030643 NM_182504 GQ129394 GQ129395 AY372054	-165801	+	TSC_hg19_v1_chr7_-_73256847 AK301597 AF534110 NM_152559 AY354928	-184463	-	NM_001305 TSC_hg19_v1_chr7_+_73245327 AK026651 AK124076 BC000671 AB000712	-196054	+	NM_000501 NM_001081752 NM_001081753 NM_001081754 NM_001081755 AK075554 TSC_hg19_v1_chr7_+_73442441 AK075494	1108	+	TSC_hg19_v1_chr7_+_73442462 AK125511 AK130894	1131	+	TSC_hg19_v1_chr7_+_73442469 M36860 X52896	1144	+	AY372053|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##BC030643|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##NM_182504|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129394|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129395|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##AY372054|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_001305|CLDN4|1364|claudin 4##AK026651|CLDN4|1364|claudin 4##AK124076|CLDN4|1364|claudin 4##BC000671|CLDN4|1364|claudin 4##AB000712|CLDN4|1364|claudin 4##NM_000501|ELN|2006|elastin##NM_001081752|ELN|2006|elastin##NM_001081753|ELN|2006|elastin##NM_001081754|ELN|2006|elastin##NM_001081755|ELN|2006|elastin##AK075554|ELN|2006|elastin##AK075494|ELN|2006|elastin##AK125511|ELN|2006|elastin##AK130894|ELN|2006|elastin##M36860|ELN|2006|elastin##X52896|ELN|2006|elastin	0.996516	CTCF.p2:-8:0.997
chr1	180851207	180851339	reg1005933.p1	11.427	+	AF099082 TSC_hg19_v1_chr1_+_180601194 AF115389 CU691970	-249996	+	TSC_hg19_v1_chr1_+_180601171 BC041142 AF089744	-250105	+	AK309750 TSC_hg19_v1_chr1_+_180601157	-250114	+	NM_020950 AB046834	31045	+	TSC_hg19_v1_chr1_+_180897572 BC000118	46308	+	BC009944 TSC_hg19_v1_chr1_-_180992009 AK299063 AK312440	140737	-	AF099082|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF115389|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##BC041142|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF089744|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AK309750|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_020950|KIAA1614|57710|KIAA1614##AB046834|KIAA1614|57710|KIAA1614##BC009944|STX6|10228|syntaxin 6##AK299063|STX6|10228|syntaxin 6##AK312440|STX6|10228|syntaxin 6	0.997906	CTCF.p2:-30:0.998
chr1	33552075	33552184	reg1006654.p2	11.427	+	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	-5396	+	TSC_hg19_v1_chr1_-_33502485 NM_001199199 NM_001625 NM_013411	-49629	-	AB005622 TSC_hg19_v1_chr1_-_33502470	-49654	-	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	95519	-	TSC_hg19_v1_chr1_+_33722167 NM_152493	170036	+	TSC_hg19_v1_chr1_-_33813262 AK055807	261167	-	BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##NM_001199199|AK2|204|adenylate kinase 2##NM_001625|AK2|204|adenylate kinase 2##NM_013411|AK2|204|adenylate kinase 2##AB005622|AK2|204|adenylate kinase 2##AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##NM_152493|ZNF362|149076|zinc finger protein 362	0.998277	CTCF.p2:11:0.998
chr15	76094532	76094649	reg1009396.p1	11.427	+	TSC_hg19_v1_chr15_-_76030959 AK091244	-63621	-	TSC_hg19_v1_chr15_+_76016306 BC039862 NM_175881	-78276	+	TSC_hg19_v1_chr15_-_76005190 NM_001897	-89395	-	NM_173469 TSC_hg19_v1_chr15_+_76135647 AK000617	41045	+	TSC_hg19_v1_chr15_+_76135787 BC017708 AL832429	41202	+	TSC_hg19_v1_chr15_+_76135995 CU676032 AK294199	41448	+	AK091244|DNM1P35|100128285|DNM1 pseudogene 35##BC039862|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_175881|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_001897|CSPG4|1464|chondroitin sulfate proteoglycan 4##NM_173469|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK000617|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##BC017708|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AL832429|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK294199|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2	0.997139	CTCF.p2:20:0.997
chr10	124102287	124102397	reg1008956.p1	11.426	+	AK058088 NM_144587 BC109261 BC109262	-71513	+	NM_006997 NM_206860 TSC_hg19_v1_chr10_+_123923144 BC141837 BC142673 AF095791	-179111	+	BC039311 TSC_hg19_v1_chr10_+_123923007	-179367	+	NM_001001974 TSC_hg19_v1_chr10_+_124134144	31777	+	AK314660 TSC_hg19_v1_chr10_+_124134274 BC001136	31903	+	AK057463 NM_001195608	43242	+	AK058088|BTBD16|118663|BTB (POZ) domain containing 16##NM_144587|BTBD16|118663|BTB (POZ) domain containing 16##BC109261|BTBD16|118663|BTB (POZ) domain containing 16##BC109262|BTBD16|118663|BTB (POZ) domain containing 16##NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_001001974|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##AK314660|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##BC001136|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##AK057463|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##NM_001195608|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	0.916437	CTCF.p2:-3:0.916
chr10	75841079	75841225	reg1010470.p1	11.424	+	TSC_hg19_v1_chr10_+_75757873 AK304823 NM_003373 NM_014000 AK300280 AK296509 BC099919 BC039174 M33308 AB385172 DQ894680	-83246	+	BC049374 NM_001001791	-158618	-	AB208961 TSC_hg19_v1_chr10_+_75673428	-167765	+	TSC_hg19_v1_chr10_-_75910513 BC067127	69360	-	TSC_hg19_v1_chr10_-_75910561 AK315597 AK026983 AK299352 BC026232 NM_012095 NM_207012	69536	-	TSC_hg19_v1_chr10_+_75910978 NM_001202450 NM_006721 AK301590 U90338 U33936	69817	+	AK304823|VCL|7414|vinculin##NM_003373|VCL|7414|vinculin##NM_014000|VCL|7414|vinculin##AK300280|VCL|7414|vinculin##AK296509|VCL|7414|vinculin##BC039174|VCL|7414|vinculin##M33308|VCL|7414|vinculin##DQ894680|VCL|7414|vinculin##BC049374|C10orf55|414236|chromosome 10 open reading frame 55##NM_001001791|C10orf55|414236|chromosome 10 open reading frame 55##AB208961|PLAU|5328|plasminogen activator, urokinase##BC067127|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK315597|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK026983|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK299352|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##BC026232|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_012095|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_207012|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_001202450|ADK|132|adenosine kinase##NM_006721|ADK|132|adenosine kinase##AK301590|ADK|132|adenosine kinase##U90338|ADK|132|adenosine kinase##U33936|ADK|132|adenosine kinase	0.638869	CTCF.p2:5:0.639
chr1	108324963	108325079	reg1006204.p1	11.424	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	-93897	-	AB023193 TSC_hg19_v1_chr1_+_107683657	-641417	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-642279	+	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	182579	-	AJ619961 NM_213651 AK292567	410375	-	AF123303 EU832524 EU832606 AJ619987 TSC_hg19_v1_chr1_-_108742797 AK316506	417749	-	AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.997976	CTCF.p2:-4:0.998
chr18	21096031	21096163	reg1010471.p1	11.424	+	TSC_hg19_v1_chr18_+_21083474 NM_013326 AK057192 AK295246 AK296230 AK294169 BC008305 BC002950	-12623	+	TSC_hg19_v1_chr18_+_21033285 AF013591	-62793	+	TSC_hg19_v1_chr18_+_21033263 BC039729	-62827	+	TSC_hg19_v1_chr18_-_21166428 BC063302 AF002020	70311	-	TSC_hg19_v1_chr18_-_21166458 AK295715 NM_000271	70413	-	TSC_hg19_v1_chr18_-_21242592 CU688952 AK313667 AK057782 BC030622 NM_173505	146623	-	NM_013326|C18orf8|29919|chromosome 18 open reading frame 8##AK057192|C18orf8|29919|chromosome 18 open reading frame 8##AK295246|C18orf8|29919|chromosome 18 open reading frame 8##AK296230|C18orf8|29919|chromosome 18 open reading frame 8##AK294169|C18orf8|29919|chromosome 18 open reading frame 8##BC008305|C18orf8|29919|chromosome 18 open reading frame 8##BC002950|C18orf8|29919|chromosome 18 open reading frame 8##AF013591|RIOK3|8780|RIO kinase 3 (yeast)##BC039729|RIOK3|8780|RIO kinase 3 (yeast)##BC063302|NPC1|4864|Niemann-Pick disease, type C1##AF002020|NPC1|4864|Niemann-Pick disease, type C1##AK295715|NPC1|4864|Niemann-Pick disease, type C1##NM_000271|NPC1|4864|Niemann-Pick disease, type C1##AK313667|ANKRD29|147463|ankyrin repeat domain 29##AK057782|ANKRD29|147463|ankyrin repeat domain 29##BC030622|ANKRD29|147463|ankyrin repeat domain 29##NM_173505|ANKRD29|147463|ankyrin repeat domain 29	0.999698	CTCF.p2:-10:1.000
chr1	117041788	117041931	reg1009826.p1	11.423	+	TSC_hg19_v1_chr1_-_116961216 AK309389	-80621	-	TSC_hg19_v1_chr1_-_116961205 BC007373 BC018892 BC028281 BC069003 AK309872 BC098428	-80669	-	AK296362 NM_001160234	-115868	+	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	71756	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	71818	-	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	168524	-	AK309389|ATP1A1OS|84852|ATP1A1 opposite strand##BC007373|ATP1A1OS|84852|ATP1A1 opposite strand##BC018892|ATP1A1OS|84852|ATP1A1 opposite strand##BC028281|ATP1A1OS|84852|ATP1A1 opposite strand##BC069003|ATP1A1OS|84852|ATP1A1 opposite strand##AK309872|ATP1A1OS|84852|ATP1A1 opposite strand##BC098428|ATP1A1OS|84852|ATP1A1 opposite strand##AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3	0.0	
chr17	17936907	17937043	reg1007815.p1	11.423	+	NM_001130090 NM_001130091 NM_001130092 NM_031294 TSC_hg19_v1_chr17_+_17876186 BC047873 AL136926 AK293011 BC040276 BC050419 BC050665 AK093317 AX748051	-60775	+	TSC_hg19_v1_chr17_-_17875715 AK124331 AK295111 AK301944 AK303305 AK299872 AF467441 BC051650 AK294846 NM_001033551 NM_001082968	-61234	-	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	-196651	-	AM393241 CU678578 CU689282 AB528073 AF070584 BC032126 AF052185 AY203943 TSC_hg19_v1_chr17_-_17942481 BC004114 NM_145691 AK290257 AK294487 AK296382	5428	-	TSC_hg19_v1_chr17_+_17942750 BC041829 NM_024052 AK315083 AK074284 AK127580 BC000636	5832	+	TSC_hg19_v1_chr17_+_17991289 AK313362 BC062572 BC000493 NM_001388 AK297569 X80754 AK295575 DQ890768 DQ893929 BT006976	54293	+	NM_001130090|LRRC48|83450|leucine rich repeat containing 48##NM_001130091|LRRC48|83450|leucine rich repeat containing 48##NM_001130092|LRRC48|83450|leucine rich repeat containing 48##NM_031294|LRRC48|83450|leucine rich repeat containing 48##BC047873|LRRC48|83450|leucine rich repeat containing 48##AL136926|LRRC48|83450|leucine rich repeat containing 48##AK293011|LRRC48|83450|leucine rich repeat containing 48##BC040276|LRRC48|83450|leucine rich repeat containing 48##BC050419|LRRC48|83450|leucine rich repeat containing 48##BC050665|LRRC48|83450|leucine rich repeat containing 48##AK093317|LRRC48|83450|leucine rich repeat containing 48##AK124331|TOM1L2|146691|target of myb1-like 2 (chicken)##AK295111|TOM1L2|146691|target of myb1-like 2 (chicken)##AK301944|TOM1L2|146691|target of myb1-like 2 (chicken)##AK303305|TOM1L2|146691|target of myb1-like 2 (chicken)##AK299872|TOM1L2|146691|target of myb1-like 2 (chicken)##AF467441|TOM1L2|146691|target of myb1-like 2 (chicken)##BC051650|TOM1L2|146691|target of myb1-like 2 (chicken)##AK294846|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001033551|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001082968|TOM1L2|146691|target of myb1-like 2 (chicken)##BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1##AM393241|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF070584|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC032126|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF052185|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AY203943|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC004114|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_145691|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK290257|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK294487|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC041829|C17orf39|79018|chromosome 17 open reading frame 39##NM_024052|C17orf39|79018|chromosome 17 open reading frame 39##AK315083|C17orf39|79018|chromosome 17 open reading frame 39##AK074284|C17orf39|79018|chromosome 17 open reading frame 39##AK127580|C17orf39|79018|chromosome 17 open reading frame 39##BC000636|C17orf39|79018|chromosome 17 open reading frame 39##AK313362|DRG2|1819|developmentally regulated GTP binding protein 2##BC062572|DRG2|1819|developmentally regulated GTP binding protein 2##BC000493|DRG2|1819|developmentally regulated GTP binding protein 2##NM_001388|DRG2|1819|developmentally regulated GTP binding protein 2##AK297569|DRG2|1819|developmentally regulated GTP binding protein 2##X80754|DRG2|1819|developmentally regulated GTP binding protein 2##AK295575|DRG2|1819|developmentally regulated GTP binding protein 2##DQ890768|DRG2|1819|developmentally regulated GTP binding protein 2##DQ893929|DRG2|1819|developmentally regulated GTP binding protein 2##BT006976|DRG2|1819|developmentally regulated GTP binding protein 2	0.997895	CTCF.p2:29:0.998
chr19	4791232	4791332	reg1006039.p1	11.423	+	TSC_hg19_v1_chr19_+_4769144 AB058892 AB058893 BC090884 BC117294 BC117296 BC143983	-22121	+	TSC_hg19_v1_chr19_-_4723831 AF542510 AK122654 NM_139159 AF452102	-67438	-	BC037948 TSC_hg19_v1_chr19_-_4723798	-67482	-	NM_018708 TSC_hg19_v1_chr19_+_4791745	454	+	AK126532 AK315554 TSC_hg19_v1_chr19_+_4791756	474	+	TSC_hg19_v1_chr19_+_4791757 AK074232 BC004988 AY356352 EU446817 AB384759 AJ311359	530	+	AB058892|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##AB058893|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##BC090884|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##BC117294|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##BC117296|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##AF542510|DPP9|91039|dipeptidyl-peptidase 9##AK122654|DPP9|91039|dipeptidyl-peptidase 9##NM_139159|DPP9|91039|dipeptidyl-peptidase 9##AF452102|DPP9|91039|dipeptidyl-peptidase 9##BC037948|DPP9|91039|dipeptidyl-peptidase 9##NM_018708|FEM1A|55527|fem-1 homolog a (C. elegans)##AK126532|FEM1A|55527|fem-1 homolog a (C. elegans)##AK315554|FEM1A|55527|fem-1 homolog a (C. elegans)##AK074232|FEM1A|55527|fem-1 homolog a (C. elegans)##BC004988|FEM1A|55527|fem-1 homolog a (C. elegans)##AY356352|FEM1A|55527|fem-1 homolog a (C. elegans)##EU446817|FEM1A|55527|fem-1 homolog a (C. elegans)##AJ311359|FEM1A|55527|fem-1 homolog a (C. elegans)	0.982506	CTCF.p2:-9:0.983
chr2	209260134	209260254	reg1007109.p1	11.423	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-35569	+	TSC_hg19_v1_chr2_+_209131083 AK127769	-129111	+	TSC_hg19_v1_chr2_+_209131009 AY457063 BC017736 BC032389 NM_001178000 NM_015040 NM_152671 BC125052 BC125053	-129198	+	BC036811 NM_005048 U25128 HQ257935 AY497546	11467	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	1028560	+	BC110423 TSC_hg19_v1_chr2_+_210444185	1183976	+	AK294181|PTH2R|5746|parathyroid hormone 2 receptor##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##AY457063|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC017736|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC032389|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001178000|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_015040|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_152671|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC125052|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC125053|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC110423|MAP2|4133|microtubule-associated protein 2	0.986747	CTCF.p2:-34:0.987
chr1	25830435	25830544	reg1007701.p2	11.422	+	TSC_hg19_v1_chr1_+_25757387 AK311472 NM_018202 AY845015 BC007687 AK001609 AY845035 AY845036 BC032427 BC020801	-73004	+	AB018644 AB018645 AB030388 AB049753 AF056965 AF177938 AM295498 AM295506 DQ178642 DQ266353 DQ266400 DQ322275 FR691748 FR691750 GU474431 GU563377 GU810838 HE572747 JF436968 S57967 X63096 X63095 AY603478 X63098 Z97026 BC075081 M34015 AF510065 AF510066 AF510067 AF510068 X54534 NM_020485 NM_138616 NM_138617 NM_138618 BC139905	-83149	-	TSC_hg19_v1_chr1_+_25664821 NM_014313 AK311092 AF087880 AL136627 AK299180 AK311355 AK312588 AY358650 AY071927 BC007341 BC066908 AF081282	-165655	+	TSC_hg19_v1_chr1_+_25870097 AK091219 NM_015627	39602	+	TSC_hg19_v1_chr1_+_25870146 BC029770 AL117654 AB528624	39675	+	AF261655 NM_020379	113469	+	AK311472|TMEM57|55219|transmembrane protein 57##NM_018202|TMEM57|55219|transmembrane protein 57##AY845015|TMEM57|55219|transmembrane protein 57##BC007687|TMEM57|55219|transmembrane protein 57##AK001609|TMEM57|55219|transmembrane protein 57##AY845035|TMEM57|55219|transmembrane protein 57##AY845036|TMEM57|55219|transmembrane protein 57##BC032427|TMEM57|55219|transmembrane protein 57##BC020801|TMEM57|55219|transmembrane protein 57##AB018644|RHCE|6006|Rh blood group, CcEe antigens##AB018645|RHCE|6006|Rh blood group, CcEe antigens##AB030388|RHCE|6006|Rh blood group, CcEe antigens##AB049753|RHCE|6006|Rh blood group, CcEe antigens##AF056965|RHCE|6006|Rh blood group, CcEe antigens##AF177938|RHD|6007|Rh blood group, D antigen##AM295498|RHCE|6006|Rh blood group, CcEe antigens##AM295506|RHCE|6006|Rh blood group, CcEe antigens##DQ178642|RHCE|6006|Rh blood group, CcEe antigens##DQ266353|RHCE|6006|Rh blood group, CcEe antigens##DQ266400|RHCE|6006|Rh blood group, CcEe antigens##DQ322275|RHCE|6006|Rh blood group, CcEe antigens##FR691748|RHCE|6006|Rh blood group, CcEe antigens##FR691750|RHCE|6006|Rh blood group, CcEe antigens##GU474431|RHCE|6006|Rh blood group, CcEe antigens##GU563377|RHCE|6006|Rh blood group, CcEe antigens##GU810838|RHCE|6006|Rh blood group, CcEe antigens##S57967|RHCE|6006|Rh blood group, CcEe antigens##X63096|RHCE|6006|Rh blood group, CcEe antigens##X63095|RHCE|6006|Rh blood group, CcEe antigens##AY603478|RHCE|6006|Rh blood group, CcEe antigens##X63098|RHCE|6006|Rh blood group, CcEe antigens##Z97026|RHD|6007|Rh blood group, D antigen##BC075081|RHCE|6006|Rh blood group, CcEe antigens##M34015|RHCE|6006|Rh blood group, CcEe antigens##AF510065|RHCE|6006|Rh blood group, CcEe antigens##AF510066|RHCE|6006|Rh blood group, CcEe antigens##AF510067|RHCE|6006|Rh blood group, CcEe antigens##AF510068|RHCE|6006|Rh blood group, CcEe antigens##X54534|RHCE|6006|Rh blood group, CcEe antigens##NM_020485|RHCE|6006|Rh blood group, CcEe antigens##NM_138616|RHCE|6006|Rh blood group, CcEe antigens##NM_138617|RHCE|6006|Rh blood group, CcEe antigens##NM_138618|RHCE|6006|Rh blood group, CcEe antigens##BC139905|RHCE|6006|Rh blood group, CcEe antigens##NM_014313|TMEM50A|23585|transmembrane protein 50A##AK311092|TMEM50A|23585|transmembrane protein 50A##AF087880|TMEM50A|23585|transmembrane protein 50A##AL136627|TMEM50A|23585|transmembrane protein 50A##AK299180|TMEM50A|23585|transmembrane protein 50A##AK311355|TMEM50A|23585|transmembrane protein 50A##AK312588|TMEM50A|23585|transmembrane protein 50A##AY358650|TMEM50A|23585|transmembrane protein 50A##AY071927|TMEM50A|23585|transmembrane protein 50A##BC007341|TMEM50A|23585|transmembrane protein 50A##BC066908|TMEM50A|23585|transmembrane protein 50A##AF081282|TMEM50A|23585|transmembrane protein 50A##AK091219|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##NM_015627|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##BC029770|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AL117654|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1	0.99285	CTCF.p2:-8:0.993
chr9	107922118	107922203	reg1005771.p1	11.422	+	NM_005502 TSC_hg19_v1_chr9_-_107690527	-231631	-	AK024328 TSC_hg19_v1_chr9_-_107690437 AF258627	-231680	-	BC146856 TSC_hg19_v1_chr9_-_107690419 AF285167 BC034824 BC141816 BC142693 AK022254	-231776	-	TSC_hg19_v1_chr9_+_108006931 NM_080546	84753	+	TSC_hg19_v1_chr9_+_108006937 AJ272365	84791	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	84907	+	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##NM_080546|SLC44A1|23446|solute carrier family 44, member 1##AJ272365|SLC44A1|23446|solute carrier family 44, member 1##AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1	0.908228	CTCF.p2:-5:0.908
chrX	152526074	152526214	reg1011098.p1	11.422	+	AY148486 EU161102 BC017555 AK314979 NM_004988	-40050	-	NM_032882 NM_001242319	-280131	-	NM_001242319 AK289879 NM_001170944 NM_032882 AK055322	-285349	+	TSC_hg19_v1_chrX_+_152599610 AK122976 NM_001080485	73465	+	NM_001136273	157636	+	NM_080701	185800	-	AY148486|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##EU161102|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##BC017555|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##AK314979|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##NM_004988|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##NM_032882|PNMA6A|84968|paraneoplastic antigen like 6A##NM_001242319|PNMA6D|100287466|paraneoplastic antigen like 6D##NM_001242319|PNMA6D|100287466|paraneoplastic antigen like 6D##AK289879|PNMA6C|100287428|paraneoplastic antigen like 6C##NM_001170944|PNMA6C|100287428|paraneoplastic antigen like 6C##NM_032882|PNMA6A|84968|paraneoplastic antigen like 6A##AK055322|PNMA6C|100287428|paraneoplastic antigen like 6C##AK122976|ZNF275|10838|zinc finger protein 275##NM_001080485|ZNF275|10838|zinc finger protein 275##NM_001136273|ZFP92|139735|zinc finger protein 92 homolog (mouse)##NM_080701|TREX2|11219|three prime repair exonuclease 2	0.973294	CTCF.p2:12:0.973
chr1	165562302	165562421	reg1009700.p1	11.421	+	TSC_hg19_v1_chr1_+_165513441 NM_001005214 BC132981 BC132983	-48889	+	AB593016 AK312922 NM_006917	-147816	-	AK127724 NM_177398	-236410	-	NM_004528	37748	+	TSC_hg19_v1_chr1_+_165600499 BC005964 DQ185045 AK312103 AF026977 AK223012 BC000505	38110	+	TSC_hg19_v1_chr1_-_165667539 AK302191 AK302183 X75425 U50203	105227	-	NM_001005214|LRRC52|440699|leucine rich repeat containing 52##BC132981|LRRC52|440699|leucine rich repeat containing 52##BC132983|LRRC52|440699|leucine rich repeat containing 52##AB593016|RXRG|6258|retinoid X receptor, gamma##AK312922|RXRG|6258|retinoid X receptor, gamma##NM_006917|RXRG|6258|retinoid X receptor, gamma##AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_004528|MGST3|4259|microsomal glutathione S-transferase 3##BC005964|MGST3|4259|microsomal glutathione S-transferase 3##DQ185045|MGST3|4259|microsomal glutathione S-transferase 3##AK312103|MGST3|4259|microsomal glutathione S-transferase 3##AF026977|MGST3|4259|microsomal glutathione S-transferase 3##AK223012|MGST3|4259|microsomal glutathione S-transferase 3##BC000505|MGST3|4259|microsomal glutathione S-transferase 3##AK302191|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK302183|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##X75425|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##U50203|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1	0.320161	CTCF.p2:8:0.320
chr9	112232045	112232164	reg1008055.p1	11.421	+	BX648253 NM_001145369 NM_001145370	-18441	-	AK296265 AK296388 AK316118 NM_001145371 NM_001145372	-40891	-	TSC_hg19_v1_chr9_-_112083330 AB032179	-148814	-	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	28485	-	BC039306 NM_001037293 AK095003	170965	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	310511	+	BX648253|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145369|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145370|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AB032179|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	0.996534	CTCF.p2:16:0.997
chr10	30976737	30976865	reg1008275.p2	11.420	+	AF139543 BC066294 NM_183058	-58166	-	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-253680	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-253862	+	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	311651	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	344020	-	TSC_hg19_v1_chr10_+_31607451 BX647794	630635	+	AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1	0.996054	CTCF.p2:-14:0.996
chr1	111323593	111323730	reg1009523.p1	11.420	+	TSC_hg19_v1_chr1_-_111217626 BC035059 NM_002232	-106021	-	TSC_hg19_v1_chr1_-_111217553 AK314009	-106117	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	-106309	-	NM_001040033 BC035456	90168	+	NM_000560 TSC_hg19_v1_chr1_+_111415769 AK313582 AK298723	92094	+	BC040693 TSC_hg19_v1_chr1_+_111415791 M37033 M60871	92141	+	BC035059|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##NM_002232|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##NM_001040033|CD53|963|CD53 molecule##BC035456|CD53|963|CD53 molecule##NM_000560|CD53|963|CD53 molecule##AK313582|CD53|963|CD53 molecule##AK298723|CD53|963|CD53 molecule##BC040693|CD53|963|CD53 molecule##M37033|CD53|963|CD53 molecule##M60871|CD53|963|CD53 molecule	0.999757	CTCF.p2:21:1.000
chr15	36043948	36044065	reg1008200.p2	11.420	+	CU688170 TSC_hg19_v1_chr15_-_35838365 BC066652 AK094007 AL833427 AX748407 AK125017 NM_001141972 NM_080650	-205620	-	NM_014106 TSC_hg19_v1_chr15_-_35280498	-763494	-	TSC_hg19_v1_chr15_-_35280489 BC071603 AK291438	-763552	-	TSC_hg19_v1_chr15_+_36871914 NM_001130010 AK026504 BC006254	827893	+	NM_032499	888799	+	CU674744 EU831754 EU831831 TSC_hg19_v1_chr15_-_37390403 AK294411 AK311546 AK056038 NM_172315	1346460	-	BC066652|ATPBD4|89978|ATP binding domain 4##AK094007|ATPBD4|89978|ATP binding domain 4##AL833427|ATPBD4|89978|ATP binding domain 4##AK125017|ATPBD4|89978|ATP binding domain 4##NM_001141972|ATPBD4|89978|ATP binding domain 4##NM_080650|ATPBD4|89978|ATP binding domain 4##NM_014106|ZNF770|54989|zinc finger protein 770##BC071603|ZNF770|54989|zinc finger protein 770##AK291438|ZNF770|54989|zinc finger protein 770##NM_001130010|C15orf41|84529|chromosome 15 open reading frame 41##AK026504|C15orf41|84529|chromosome 15 open reading frame 41##BC006254|C15orf41|84529|chromosome 15 open reading frame 41##NM_032499|C15orf41|84529|chromosome 15 open reading frame 41##EU831754|MEIS2|4212|Meis homeobox 2##EU831831|MEIS2|4212|Meis homeobox 2##AK294411|MEIS2|4212|Meis homeobox 2##AK311546|MEIS2|4212|Meis homeobox 2##AK056038|MEIS2|4212|Meis homeobox 2##NM_172315|MEIS2|4212|Meis homeobox 2	0.997861	CTCF.p2:-5:0.998
chr2	219984313	219984412	reg1006968.p2	11.420	+	BC136587 BC136588 NM_002181	-59125	-	AK127189 AK302678 AK302688 BC031585 NM_152389 NM_194302 BC047637	-78120	-	AF166331 NM_005209 BC006285 NM_057093 NM_057094	-126239	-	TSC_hg19_v1_chr2_-_220025558 BC012732 AK022672 AJ972687 BC030986 NM_024782	41177	-	DQ891019 DQ894199 CU688862 AK091919 BC030243 AK298256 AK298277 AK055730 NM_001144889 NM_001144890 NM_144712	50399	-	CR457401 CU674686 AK311656 TSC_hg19_v1_chr2_-_220041648 BC001393 AK314975 AK075274 BC012821 AY007160 NM_015680	57265	-	BC136587|IHH|3549|Indian hedgehog##BC136588|IHH|3549|Indian hedgehog##NM_002181|IHH|3549|Indian hedgehog##AK127189|CCDC108|255101|coiled-coil domain containing 108##AK302678|CCDC108|255101|coiled-coil domain containing 108##AK302688|CCDC108|255101|coiled-coil domain containing 108##BC031585|CCDC108|255101|coiled-coil domain containing 108##NM_152389|CCDC108|255101|coiled-coil domain containing 108##NM_194302|CCDC108|255101|coiled-coil domain containing 108##BC047637|CCDC108|255101|coiled-coil domain containing 108##AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2##BC012732|NHEJ1|79840|nonhomologous end-joining factor 1##AK022672|NHEJ1|79840|nonhomologous end-joining factor 1##AJ972687|NHEJ1|79840|nonhomologous end-joining factor 1##BC030986|NHEJ1|79840|nonhomologous end-joining factor 1##NM_024782|NHEJ1|79840|nonhomologous end-joining factor 1##DQ891019|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##DQ894199|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##BC030243|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298256|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298277|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK055730|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144889|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144890|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_144712|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##CR457401|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC001393|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK314975|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK075274|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC012821|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AY007160|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##NM_015680|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1	0.991867	CTCF.p2:-7:0.992
chr12	109823428	109823558	reg1010161.p1	11.419	+	AK131519 BC113073 BC146825 NM_213596 TSC_hg19_v1_chr12_-_109747027	-76460	-	TSC_hg19_v1_chr12_+_109665176 U34591	-158275	+	NM_001093 AJ575431 AJ575592 DQ493870 U89344 TSC_hg19_v1_chr12_+_109577280	-246252	+	NM_001101421	3030	+	AF113208 BC040062 TSC_hg19_v1_chr12_-_109915106 AK056912 AK222548	91614	-	TSC_hg19_v1_chr12_-_109915133 AK092170 AX747390 AK027543 AY205299 NM_031954	91649	-	AK131519|FOXN4|121643|forkhead box N4##BC113073|FOXN4|121643|forkhead box N4##BC146825|FOXN4|121643|forkhead box N4##NM_213596|FOXN4|121643|forkhead box N4##U34591|ACACB|32|acetyl-CoA carboxylase beta##NM_001093|ACACB|32|acetyl-CoA carboxylase beta##AJ575431|ACACB|32|acetyl-CoA carboxylase beta##AJ575592|ACACB|32|acetyl-CoA carboxylase beta##DQ493870|ACACB|32|acetyl-CoA carboxylase beta##U89344|ACACB|32|acetyl-CoA carboxylase beta##NM_001101421|MYO1H|283446|myosin IH##AF113208|KCTD10|83892|potassium channel tetramerisation domain containing 10##BC040062|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK056912|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK222548|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK092170|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK027543|KCTD10|83892|potassium channel tetramerisation domain containing 10##AY205299|KCTD10|83892|potassium channel tetramerisation domain containing 10##NM_031954|KCTD10|83892|potassium channel tetramerisation domain containing 10	0.774883	CTCF.p2:10:0.775
chr17	70721753	70721868	reg1008112.p2	11.419	+	AK000477 TSC_hg19_v1_chr17_-_70588944	-132867	-	TSC_hg19_v1_chr17_+_70117187 BC007951	-604570	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-604640	+	AF331643 TSC_hg19_v1_chr17_-_71088816	367006	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	367013	-	BC035631 TSC_hg19_v1_chr17_-_71088831	367021	-	AK000477|LOC100499467|100499467|uncharacterized LOC100499467##BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.094927	
chr2	147802746	147802854	reg1007215.p1	11.419	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-2524879	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-2525169	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-2527597	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	799317	+	TSC_hg19_v1_chr2_+_148602300 AK314124	799535	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	799845	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.986379	CTCF.p2:3:0.986
chr1	178001068	178001200	reg1009952.p1	11.418	+	BC009106 TSC_hg19_v1_chr1_-_177939393	-61764	-	AB063357 NM_033127 TSC_hg19_v1_chr1_-_177939202	-62008	-	AB051534 AB161694 BC028036 NM_021165	-860553	+	TSC_hg19_v1_chr1_-_178007060 AK092831 BX538051 AB067515	5965	-	AK124464 TSC_hg19_v1_chr1_-_178062762	61619	-	TSC_hg19_v1_chr1_+_178062868 AK075169 NM_170692 AK311017	61716	+	BC009106|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AB063357|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##NM_033127|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AB051534|FAM5B|57795|family with sequence similarity 5, member B##AB161694|FAM5B|57795|family with sequence similarity 5, member B##BC028036|FAM5B|57795|family with sequence similarity 5, member B##NM_021165|FAM5B|57795|family with sequence similarity 5, member B##AK092831|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##BX538051|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##AK124464|LOC100302401|100302401|uncharacterized LOC100302401##AK075169|RASAL2|9462|RAS protein activator like 2##NM_170692|RASAL2|9462|RAS protein activator like 2##AK311017|RASAL2|9462|RAS protein activator like 2	0.999816	CTCF.p2:0:1.000
chr1	204535066	204535201	reg1007349.p1	11.418	+	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	-49523	+	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	-49631	+	TSC_hg19_v1_chr1_-_204463934 BC094741	-71368	-	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	119458	-	TSC_hg19_v1_chr1_+_204797779 BC040674 NM_001005388 NM_001005389 NM_001160332 NM_001160333 NM_015090 AK295291 AK299262 AK090639 AX746553	262679	+	TSC_hg19_v1_chr1_+_204839989 AK308686	304850	+	AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2##BC040674|NFASC|23114|neurofascin##NM_001005388|NFASC|23114|neurofascin##NM_001005389|NFASC|23114|neurofascin##NM_001160332|NFASC|23114|neurofascin##NM_001160333|NFASC|23114|neurofascin##NM_015090|NFASC|23114|neurofascin##AK295291|NFASC|23114|neurofascin##AK299262|NFASC|23114|neurofascin##AK090639|NFASC|23114|neurofascin##AK308686|NFASC|23114|neurofascin	0.999471	CTCF.p2:2:0.999
chr4	114992293	114992423	reg1009993.p1	11.418	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-91519	-	TSC_hg19_v1_chr4_-_114682923 NM_001221 NM_172114 NM_172115 NM_172127 NM_172128 NM_172129	-309388	-	TSC_hg19_v1_chr4_-_114682619 AK055642 AB209288	-309702	-	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	527225	+	NM_003360 U30930	551164	+	BC113075 BC012326 AK289670 AB036429 NM_022569	1042623	-	AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##NM_001221|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172114|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172115|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172127|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172128|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172129|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK055642|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AB209288|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	0.684632	CTCF.p2:0:0.685
chr6	148723	148904	reg1004575.p2	11.418	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	143272	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	143684	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	242951	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	2.741217	CTCF.p2:-30:0.415	CTCF.p2:30:0.964	CTCF.p2:63:0.287	CTCF.p2:-90:0.443	CTCF.p2:91:0.632
chr11	5705951	5706093	reg1008099.p1	11.417	+	TSC_hg19_v1_chr11_-_5701373 AB362928 AY625000 CU676898 DQ288685 JF928461 JF928462 AF220025 AF220026 AF220027 AF220028 AF220029	-4606	-	NM_130390 AB039904	-52525	+	NM_021616 AK027876 AF220143 AF220144	-59796	+	TSC_hg19_v1_chr11_-_5706305 BC021258 BX647152 AK027593 NM_033034 NM_033092 NM_033093	241	-	AK298934 NM_001199573 NM_006074 TSC_hg19_v1_chr11_+_5710861	4824	+	TSC_hg19_v1_chr11_+_5711025 AK308221 AK310098 AK311659 BC022281 AK298715 BC035582 AK290434 X82200 AK308796 AK301192	4996	+	AB362928|TRIM5|85363|tripartite motif containing 5##AY625000|TRIM5|85363|tripartite motif containing 5##DQ288685|TRIM5|85363|tripartite motif containing 5##AF220025|TRIM5|85363|tripartite motif containing 5##AF220026|TRIM5|85363|tripartite motif containing 5##AF220027|TRIM5|85363|tripartite motif containing 5##AF220028|TRIM5|85363|tripartite motif containing 5##AF220029|TRIM5|85363|tripartite motif containing 5##NM_130390|TRIM34|53840|tripartite motif containing 34##AB039904|TRIM34|53840|tripartite motif containing 34##NM_021616|TRIM34|53840|tripartite motif containing 34##AK027876|TRIM34|53840|tripartite motif containing 34##AF220143|TRIM34|53840|tripartite motif containing 34##AF220144|TRIM34|53840|tripartite motif containing 34##BC021258|TRIM5|85363|tripartite motif containing 5##BX647152|TRIM5|85363|tripartite motif containing 5##AK027593|TRIM5|85363|tripartite motif containing 5##NM_033034|TRIM5|85363|tripartite motif containing 5##NM_033092|TRIM5|85363|tripartite motif containing 5##NM_033093|TRIM5|85363|tripartite motif containing 5##AK298934|TRIM22|10346|tripartite motif containing 22##NM_001199573|TRIM22|10346|tripartite motif containing 22##NM_006074|TRIM22|10346|tripartite motif containing 22##AK308221|TRIM22|10346|tripartite motif containing 22##AK310098|TRIM22|10346|tripartite motif containing 22##BC022281|TRIM22|10346|tripartite motif containing 22##AK298715|TRIM22|10346|tripartite motif containing 22##BC035582|TRIM22|10346|tripartite motif containing 22##AK290434|TRIM22|10346|tripartite motif containing 22##X82200|TRIM22|10346|tripartite motif containing 22##AK308796|TRIM22|10346|tripartite motif containing 22##AK301192|TRIM22|10346|tripartite motif containing 22	0.010963	
chr19	13076241	13076391	reg1002309.p2	11.416	+	TSC_hg19_v1_chr19_-_13068038 AF479749 NM_052850	-8271	-	AJ295986 BC004944 BC013027 BC013039 AF412816 AF475095 AJ429498 CU686712 BC069200 TSC_hg19_v1_chr19_-_13068030	-8297	-	TSC_hg19_v1_chr19_+_13056675 AK289908 BC088364 BC014026 AB209713 D21235 AB463210 L37720	-19585	+	AK095926 NM_152654 BC101800 BC113476 AB070695 HQ258091	4136	+	TSC_hg19_v1_chr19_+_13106288 BC052801 NM_002501 AB385580 BT019732	30086	+	TSC_hg19_v1_chr19_+_13134807 AK297261 U18759	58488	+	AF479749|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##NM_052850|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AJ295986|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC004944|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC013027|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC013039|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AF412816|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AF475095|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AJ429498|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC069200|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AK289908|RAD23A|5886|RAD23 homolog A (S. cerevisiae)##BC088364|RAD23A|5886|RAD23 homolog A (S. cerevisiae)##BC014026|RAD23A|5886|RAD23 homolog A (S. cerevisiae)##AB209713|RAD23A|5886|RAD23 homolog A (S. cerevisiae)##D21235|RAD23A|5886|RAD23 homolog A (S. cerevisiae)##AK095926|DAND5|199699|DAN domain family, member 5##NM_152654|DAND5|199699|DAN domain family, member 5##BC101800|DAND5|199699|DAN domain family, member 5##BC113476|DAND5|199699|DAN domain family, member 5##AB070695|DAND5|199699|DAN domain family, member 5##HQ258091|DAND5|199699|DAN domain family, member 5##NM_002501|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BT019732|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK297261|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U18759|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	0.817444	CTCF.p2:22:0.817
chr22	23197980	23198100	reg1009843.p1	11.416	+	X62125 TSC_hg19_v1_chr22_+_23165276 AK129603 BC071804 BC033102 CU689610 L03633 HM996064 HM996172 AF124174 AF194540 AF194541 AF194542 AF194543 AF194544 AF194545 AF194546 AF194547 AF194548 AF194549 AF194550 AF194551 AF194552 AF194553 AF194554 AF194555 AF194556 AF194557 AF194558 AF194559 AF194560 AF194561 AF194562 AF194563 AF194564 AF194565 AF194566 AF194567 AF194568 AF194569 AF194570 AF194571 AF194572 AF194573 AF194574 AF194575 AF194576 AF194577 AJ388658 AJ697911 AM181371 AM183998 AM184000 AM184018 AY685383 AY942038 DQ098709 DQ098711 DQ098766 DQ098772 DQ098775 DQ098778 DQ098782 DQ322816 DQ322984 DQ322992 EF589387 EF589498 EF589544 GU086862 L26532 Y09387 AM184068 DQ098712 DQ098779 AJ399866 AY050712 DQ322899 DQ322900 DQ322979 L21956 S67988 AY950800 U09888 U09892 Y08149 AF103683 AF044486 AY962389 AF092503 AJ408283 DQ098753 Z46858 DQ098738 DQ098739 DQ098762 L38428 DQ098710 AF103704 AF103701 AF103718 AF490954 AF490947 AF103709 AF103640 AF103644 AF103645 AF103647 AF103697 AF103698 AF103700 U87151	-32645	+	TSC_hg19_v1_chr22_+_23154240 L29158 L29159 L29160 L29161 L29164 BC032452 BC089414 AY190827 X57810 L26902	-43765	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	-62934	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	15653	+	TSC_hg19_v1_chr22_+_23222900 AK127411 S77601 X57802 X57803 X57816 X57818 AB369252 AF026919 AF026925 AY190825 L26400 AF490955 AF490961	24889	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	32043	+	BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3##AB369252|CYAT1|100290481|immunoglobulin lambda light chain-like##AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5	0.997512	CTCF.p2:10:0.998
chr22	50780851	50780972	reg1006916.p1	11.416	+	AK054743 AK022407 BC031069 NM_001001794	-15465	-	NM_012401	-34911	-	TSC_hg19_v1_chr22_-_50720982 AK056543	-59936	-	TSC_hg19_v1_chr22_+_50781755 NM_001242898 NM_001242899 NM_001242900 NM_014678 BC032664 BC006568 BC052995	832	+	AB014585 TSC_hg19_v1_chr22_+_50781776 BC041698 AK302472	892	+	BC046169 TSC_hg19_v1_chr22_-_50893787 BC056915	112855	-	AK054743|FAM116B|414918|family with sequence similarity 116, member B##BC031069|FAM116B|414918|family with sequence similarity 116, member B##NM_001001794|FAM116B|414918|family with sequence similarity 116, member B##NM_012401|PLXNB2|23654|plexin B2##AK056543|PLXNB2|23654|plexin B2##NM_001242898|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242899|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242900|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_014678|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC032664|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC006568|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC052995|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##AB014585|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC041698|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##AK302472|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC046169|SBF1|6305|SET binding factor 1##BC056915|SBF1|6305|SET binding factor 1	0.926483	CTCF.p2:4:0.926
chr3	45553101	45553225	reg1010708.p1	11.416	+	AK308146 BC025989 TSC_hg19_v1_chr3_+_45430067 D21851 NM_015340	-123099	+	TSC_hg19_v1_chr3_-_45267804 NM_015444	-285338	-	AB078417 AF438313 TSC_hg19_v1_chr3_-_45267780 BC057390	-285455	-	TSC_hg19_v1_chr3_+_45635397 M80651	82422	+	TSC_hg19_v1_chr3_+_45636176 BC117236 BC117238 NM_014240 AJ132408 HQ258355	83108	+	CR749564 TSC_hg19_v1_chr3_+_45730767 NM_014016	177570	+	AK308146|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##BC025989|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##D21851|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015340|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##M80651|LIMD1|8994|LIM domains containing 1##BC117236|LIMD1|8994|LIM domains containing 1##BC117238|LIMD1|8994|LIM domains containing 1##NM_014240|LIMD1|8994|LIM domains containing 1##AJ132408|LIMD1|8994|LIM domains containing 1##HQ258355|LIMD1|8994|LIM domains containing 1##CR749564|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##NM_014016|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	0.312521	CTCF.p2:10:0.313
chr1	63614847	63614982	reg1009566.p1	11.415	+	TSC_hg19_v1_chr1_+_63249807 NM_032852 NM_178221 AK027773 BC018678 BC033024 BC008395	-365101	+	DQ341187 TSC_hg19_v1_chr1_-_63154045 AK055401 NM_033407 AK292640	-460787	-	NM_014495 AK315304 TSC_hg19_v1_chr1_+_63063190 AK289426 BC007059 BC058287 AY358273 AF152562 AB590604 CU691298	-551703	+	AB464527 NM_012183	173815	+	TSC_hg19_v1_chr1_+_63789065 L12142	174170	+	NM_013339 AF063604 TSC_hg19_v1_chr1_+_63833313	218373	+	NM_032852|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_178221|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##AK027773|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC018678|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC033024|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC008395|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##DQ341187|DOCK7|85440|dedicator of cytokinesis 7##AK055401|DOCK7|85440|dedicator of cytokinesis 7##NM_033407|DOCK7|85440|dedicator of cytokinesis 7##AK292640|DOCK7|85440|dedicator of cytokinesis 7##NM_014495|ANGPTL3|27329|angiopoietin-like 3##AK315304|ANGPTL3|27329|angiopoietin-like 3##AK289426|ANGPTL3|27329|angiopoietin-like 3##BC007059|ANGPTL3|27329|angiopoietin-like 3##BC058287|ANGPTL3|27329|angiopoietin-like 3##AY358273|ANGPTL3|27329|angiopoietin-like 3##AF152562|ANGPTL3|27329|angiopoietin-like 3##NM_012183|FOXD3|27022|forkhead box D3##L12142|FOXD3|27022|forkhead box D3##NM_013339|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF063604|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	0.784514	CTCF.p2:-8:0.785
chr2	20425170	20425289	reg1007871.p1	11.415	+	TSC_hg19_v1_chr2_-_20425168 NM_001006946	-50	-	X60306 AB464260 CU679093 DQ893265 DQ896595 TSC_hg19_v1_chr2_-_20424892 AK299385 J05392 AK313974 AK222739 BC008765 AJ551176 AK311409 NM_002997	-442	-	NM_014713	-173441	-	AF272350 TSC_hg19_v1_chr2_-_20512079	86820	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	101904	-	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	125190	-	NM_001006946|SDC1|6382|syndecan 1##X60306|SDC1|6382|syndecan 1##DQ893265|SDC1|6382|syndecan 1##DQ896595|SDC1|6382|syndecan 1##AK299385|SDC1|6382|syndecan 1##J05392|SDC1|6382|syndecan 1##AK313974|SDC1|6382|syndecan 1##AK222739|SDC1|6382|syndecan 1##BC008765|SDC1|6382|syndecan 1##AJ551176|SDC1|6382|syndecan 1##NM_002997|SDC1|6382|syndecan 1##NM_014713|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)	0.033762	
chr15	86029303	86029447	reg1009863.p1	11.413	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	-105484	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-363057	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-504049	+	AF127481 NM_144767	190892	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	308722	-	TSC_hg19_v1_chr15_-_86338178 NM_022480	308820	-	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)	0.999886	CTCF.p2:-14:1.000
chr7	99814852	99815000	reg1008151.p1	11.412	+	TSC_hg19_v1_chr7_+_99775540 NM_012447 AK292394 BC146806 AK302693 BC047490 BC028684 AL833816 BC140932	-39363	+	AJ007798 TSC_hg19_v1_chr7_+_99775380	-39562	+	AB587513 AM392909 CU693354 DQ893325 DQ896641 AL834418 TSC_hg19_v1_chr7_-_99774981 AB209144 AK096281 BC027972 NM_152742 AY093588	-39999	-	NM_024070	1944	+	BC065200 AK290510 TSC_hg19_v1_chr7_-_99869856 BC044886 BC090867 BC033723 BC053367 NM_178831	54904	-	BC056606 NM_001004351	90398	+	NM_012447|STAG3|10734|stromal antigen 3##AK292394|STAG3|10734|stromal antigen 3##BC146806|STAG3|10734|stromal antigen 3##AK302693|STAG3|10734|stromal antigen 3##BC047490|STAG3|10734|stromal antigen 3##BC028684|STAG3|10734|stromal antigen 3##AL833816|STAG3|10734|stromal antigen 3##BC140932|STAG3|10734|stromal antigen 3##AJ007798|STAG3|10734|stromal antigen 3##AM392909|GPC2|221914|glypican 2##DQ893325|GPC2|221914|glypican 2##DQ896641|GPC2|221914|glypican 2##AL834418|GPC2|221914|glypican 2##AK096281|GPC2|221914|glypican 2##BC027972|GPC2|221914|glypican 2##NM_152742|GPC2|221914|glypican 2##AY093588|GPC2|221914|glypican 2##NM_024070|PVRIG|79037|poliovirus receptor related immunoglobulin domain containing##BC065200|GATS|352954|GATS, stromal antigen 3 opposite strand##AK290510|GATS|352954|GATS, stromal antigen 3 opposite strand##BC044886|GATS|352954|GATS, stromal antigen 3 opposite strand##BC090867|GATS|352954|GATS, stromal antigen 3 opposite strand##BC033723|GATS|352954|GATS, stromal antigen 3 opposite strand##BC053367|GATS|352954|GATS, stromal antigen 3 opposite strand##NM_178831|GATS|352954|GATS, stromal antigen 3 opposite strand##BC056606|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)##NM_001004351|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)	0.494234	CTCF.p2:-20:0.432
chr1	38492443	38492558	reg1007228.p1	11.411	+	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-14070	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-14115	+	TSC_hg19_v1_chr1_-_38471187 BC014501 BC001351 BC011697 AK309179 AK290641 NM_001243878 NM_004468	-21267	-	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	19949	-	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	832886	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	846516	-	AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC014501|FHL3|2275|four and a half LIM domains 3##BC001351|FHL3|2275|four and a half LIM domains 3##BC011697|FHL3|2275|four and a half LIM domains 3##AK309179|FHL3|2275|four and a half LIM domains 3##AK290641|FHL3|2275|four and a half LIM domains 3##NM_001243878|FHL3|2275|four and a half LIM domains 3##NM_004468|FHL3|2275|four and a half LIM domains 3##L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein	0.936727	CTCF.p2:-27:0.937
chr21	46557129	46557224	reg1005278.p1	11.411	+	TSC_hg19_v1_chr21_+_46494502 AY082339 BC030663 NM_001112 NM_001160230 NM_015833 NM_015834 AB194369 AB194370 AB194371 AB194372 AB194373 AF525422 AF533142 AY135659 U76420 U76421 U76422 BC065545 U82120	-62593	+	TSC_hg19_v1_chr21_+_46359968 CU679303	-197207	+	TSC_hg19_v1_chr21_+_46359920 AF391113 AF391114 BC009341 NM_058190	-197251	+	TSC_hg19_v1_chr21_+_46572480 FJ169506	15322	+	TSC_hg19_v1_chr21_-_46707808 BC064623 AJ575591 AL110285 AB023175 AJ302079 AJ302080 AY066015 AK294966 AK290732 AK298080 NM_015227 NM_133635	150625	-	TSC_hg19_v1_chr21_+_46707955 BC022830 BC033767	150799	+	AY082339|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC030663|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001112|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001160230|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015833|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015834|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194369|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194370|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194371|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194372|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194373|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF525422|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF533142|ADARB1|104|adenosine deaminase, RNA-specific, B1##AY135659|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76420|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76421|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76422|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC065545|ADARB1|104|adenosine deaminase, RNA-specific, B1##U82120|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF391113|FAM207A|85395|family with sequence similarity 207, member A##AF391114|FAM207A|85395|family with sequence similarity 207, member A##BC009341|FAM207A|85395|family with sequence similarity 207, member A##NM_058190|FAM207A|85395|family with sequence similarity 207, member A##FJ169506|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC064623|POFUT2|23275|protein O-fucosyltransferase 2##AJ575591|POFUT2|23275|protein O-fucosyltransferase 2##AL110285|POFUT2|23275|protein O-fucosyltransferase 2##AB023175|POFUT2|23275|protein O-fucosyltransferase 2##AJ302079|POFUT2|23275|protein O-fucosyltransferase 2##AJ302080|POFUT2|23275|protein O-fucosyltransferase 2##AY066015|POFUT2|23275|protein O-fucosyltransferase 2##AK294966|POFUT2|23275|protein O-fucosyltransferase 2##AK290732|POFUT2|23275|protein O-fucosyltransferase 2##AK298080|POFUT2|23275|protein O-fucosyltransferase 2##NM_015227|POFUT2|23275|protein O-fucosyltransferase 2##NM_133635|POFUT2|23275|protein O-fucosyltransferase 2##BC022830|LOC642852|642852|uncharacterized LOC642852##BC033767|LOC642852|642852|uncharacterized LOC642852	0.955527	CTCF.p2:9:0.956
chr14	65358644	65358766	reg1009870.p1	11.410	+	J05500 AB209415 TSC_hg19_v1_chr14_-_65346722	-12062	-	AB384944 BC136284 BC136285 NM_000347 NM_001024858	-68867	-	TSC_hg19_v1_chr14_+_65171243 BC129952 BC129953	-187427	+	NM_001202558 NM_001202559 NM_001204063 NM_001204064 NM_145165 BC020550 TSC_hg19_v1_chr14_+_65381175 AK315905 AF060510 AK057626	22422	+	TSC_hg19_v1_chr14_+_65381184 AK296141 AK303739 AK296850	22489	+	BC022820 TSC_hg19_v1_chr14_-_65409460 AK225871 BC005277 BC067221 BC016756 X68314 X53463 BC039850 BC046164 NM_002083	50810	-	J05500|SPTB|6710|spectrin, beta, erythrocytic##AB209415|SPTB|6710|spectrin, beta, erythrocytic##BC136284|SPTB|6710|spectrin, beta, erythrocytic##BC136285|SPTB|6710|spectrin, beta, erythrocytic##NM_000347|SPTB|6710|spectrin, beta, erythrocytic##NM_001024858|SPTB|6710|spectrin, beta, erythrocytic##BC129952|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BC129953|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##NM_001202558|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##NM_001202559|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##NM_001204063|CHURC1|91612|churchill domain containing 1##NM_001204064|CHURC1|91612|churchill domain containing 1##NM_145165|CHURC1|91612|churchill domain containing 1##BC020550|CHURC1|91612|churchill domain containing 1##AK315905|CHURC1|91612|churchill domain containing 1##AF060510|CHURC1|91612|churchill domain containing 1##AK057626|CHURC1|91612|churchill domain containing 1##AK296141|CHURC1|91612|churchill domain containing 1##AK303739|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##AK296850|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##BC022820|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##AK225871|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC005277|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC067221|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC016756|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##X68314|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##X53463|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC039850|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC046164|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##NM_002083|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)	0.908145	CTCF.p2:0:0.908
chr10	22021221	22021360	reg1010263.p1	11.408	+	AY598745 CU687346 NM_001195626 AF060929 AF060934 AF060935 AF060936 AF060937 AF060938	-197665	+	TSC_hg19_v1_chr10_+_21823382 AB209755 BC052798 BC094844 BC129946	-197896	+	U13948 TSC_hg19_v1_chr10_+_21823274 BC065376 BC080577	-198014	+	AY225122 AK027263 TSC_hg19_v1_chr10_-_22292522 BC014436	271159	-	TSC_hg19_v1_chr10_-_22292660 BC110894 NM_022365 AK308369	271375	-	NM_001199938	477621	-	AY598745|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##NM_001195626|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060929|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060934|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060935|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060936|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060937|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060938|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AB209755|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC052798|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC094844|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC129946|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##U13948|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC065376|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC080577|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AY225122|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK027263|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC014436|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1	0.488905	CTCF.p2:4:0.489
chr13	21402797	21402911	reg1009628.p1	11.407	+	TSC_hg19_v1_chr13_-_21348081 AK055408 AK316604	-54767	-	DQ823637 BC018091 NM_174928 TSC_hg19_v1_chr13_-_21348079	-54788	-	TSC_hg19_v1_chr13_-_21295740 L23206	-107043	-	BC050680 AB051508 AB384273 AK057924 BC098402 TSC_hg19_v1_chr13_-_21476886 AK302760	74016	-	TSC_hg19_v1_chr13_-_21476909 NM_022459	74083	-	TSC_hg19_v1_chr13_-_21635685 BC127671 AF207547 AB209897 BC071572	232811	-	AK316604|N6AMT2|221143|N-6 adenine-specific DNA methyltransferase 2 (putative)##DQ823637|N6AMT2|221143|N-6 adenine-specific DNA methyltransferase 2 (putative)##BC018091|N6AMT2|221143|N-6 adenine-specific DNA methyltransferase 2 (putative)##NM_174928|N6AMT2|221143|N-6 adenine-specific DNA methyltransferase 2 (putative)##BC050680|XPO4|64328|exportin 4##AB051508|XPO4|64328|exportin 4##AK057924|XPO4|64328|exportin 4##BC098402|XPO4|64328|exportin 4##AK302760|XPO4|64328|exportin 4##NM_022459|XPO4|64328|exportin 4##BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)	0.863738	CTCF.p2:1:0.864
chr2	39457105	39457216	reg1008210.p1	11.406	+	AY845084 AY847283 NM_001009565 BC144460	-456	-	TSC_hg19_v1_chr2_-_39348166 AK290228	-109001	-	L13857 AB463274 NM_005633	-109578	-	EU832785 GQ129258 AB384884 NM_003618 TSC_hg19_v1_chr2_-_39664286 AK314487	207049	-	TSC_hg19_v1_chr2_-_39664294 BC060880	207141	-	TSC_hg19_v1_chr2_-_39664420 AK291467	207226	-	AY845084|CDKL4|344387|cyclin-dependent kinase-like 4##AY847283|CDKL4|344387|cyclin-dependent kinase-like 4##NM_001009565|CDKL4|344387|cyclin-dependent kinase-like 4##BC144460|CDKL4|344387|cyclin-dependent kinase-like 4##AK290228|SOS1|6654|son of sevenless homolog 1 (Drosophila)##L13857|SOS1|6654|son of sevenless homolog 1 (Drosophila)##NM_005633|SOS1|6654|son of sevenless homolog 1 (Drosophila)##EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##AK291467|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	0.993873	CTCF.p2:19:0.994
chr4	154265665	154265806	reg1009873.p1	11.406	+	TSC_hg19_v1_chr4_+_154178530 BC025417	-87196	+	TSC_hg19_v1_chr4_+_154125594 AK308731 NM_015271 AB011089 AF220018	-140130	+	BC011052 NM_001130067	-191466	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	52	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	140	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	121757	+	BC025417|TRIM2|23321|tripartite motif containing 2##AK308731|TRIM2|23321|tripartite motif containing 2##NM_015271|TRIM2|23321|tripartite motif containing 2##AB011089|TRIM2|23321|tripartite motif containing 2##AF220018|TRIM2|23321|tripartite motif containing 2##BC011052|TRIM2|23321|tripartite motif containing 2##NM_001130067|TRIM2|23321|tripartite motif containing 2##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922	0.083133	
chr6	114200785	114200913	reg1008822.p1	11.406	+	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	-22115	+	AK122906 NM_001013734	-1532318	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1624954	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	91423	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	91487	-	AF503292 NM_153612 BC093911 BC093913	183175	-	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	0.0	
chr7	2720646	2720751	reg1007188.p1	11.406	+	AK289723 AB075830 BC146753 NM_133463	-1540	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-48995	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	-49095	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	163110	-	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	362764	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	620301	+	AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1	0.974079	CTCF.p2:1:0.974
chr11	27180446	27180576	reg1009487.p1	11.405	+	NM_003986	-118003	+	TSC_hg19_v1_chr11_+_27015837 BC026873	-164667	+	TSC_hg19_v1_chr11_+_27015673 AK310616	-164841	+	AF382034 TSC_hg19_v1_chr11_-_27384763 AY598334 CU678989 AK313358 BC008496 AK308494 NM_030771 NM_080654	204255	-	TSC_hg19_v1_chr11_-_27494323 AB209743 AF257182 BC033039 NM_018490	313793	-	AB385247 BC053907 TSC_hg19_v1_chr11_-_27528315 BC009774 AK223156 AL833601 AK002077 NM_018362	347801	-	NM_003986|BBOX1|8424|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1##BC026873|FIBIN|387758|fin bud initiation factor homolog (zebrafish)##AF382034|CCDC34|91057|coiled-coil domain containing 34##AY598334|CCDC34|91057|coiled-coil domain containing 34##AK313358|CCDC34|91057|coiled-coil domain containing 34##BC008496|CCDC34|91057|coiled-coil domain containing 34##AK308494|CCDC34|91057|coiled-coil domain containing 34##NM_030771|CCDC34|91057|coiled-coil domain containing 34##NM_080654|CCDC34|91057|coiled-coil domain containing 34##AB209743|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF257182|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC033039|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##NM_018490|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)##BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)##AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)##AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)##AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)##NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)	0.855261	CTCF.p2:9:0.855
chr1	157163556	157163664	reg1007848.p2	11.405	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-55327	-	TSC_hg19_v1_chr1_-_157108158 L16464	-55460	-	AK131392 NM_001004341	-94011	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	358620	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	404191	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	506917	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.974225	CTCF.p2:-7:0.974
chr7	87740833	87740957	reg1007004.p1	11.405	+	TSC_hg19_v1_chr7_+_87563605 BC036029 BC092465 NM_004194 NM_016351 NM_021721 NM_021722 NM_021723 AK291010 BC062433 BC125118 BC125117 AF073291 AF155381 AF155382	-177312	+	AK302010 TSC_hg19_v1_chr7_+_87505937 BC022811 CU690272	-234915	+	BC036045 TSC_hg19_v1_chr7_+_87505839 AK292569 AF160249 BC014909 AF160876 BC035632 AK303175 BC047693	-235091	+	AB464235 L12387 TSC_hg19_v1_chr7_-_87849352 AK295225 BC011025 M32886	108457	-	TSC_hg19_v1_chr7_-_87849391 AK129770 AK310366 NM_003130	108510	-	TSC_hg19_v1_chr7_-_87856292 AK296601 NM_198901	115399	-	BC036029|ADAM22|53616|ADAM metallopeptidase domain 22##BC092465|ADAM22|53616|ADAM metallopeptidase domain 22##NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22##NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22##AK291010|ADAM22|53616|ADAM metallopeptidase domain 22##BC062433|ADAM22|53616|ADAM metallopeptidase domain 22##BC125118|ADAM22|53616|ADAM metallopeptidase domain 22##BC125117|ADAM22|53616|ADAM metallopeptidase domain 22##AF073291|ADAM22|53616|ADAM metallopeptidase domain 22##AF155381|ADAM22|53616|ADAM metallopeptidase domain 22##AF155382|ADAM22|53616|ADAM metallopeptidase domain 22##AK302010|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC022811|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC036045|DBF4|10926|DBF4 homolog (S. cerevisiae)##AK292569|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF160249|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC014909|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF160876|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC035632|DBF4|10926|DBF4 homolog (S. cerevisiae)##AK303175|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC047693|DBF4|10926|DBF4 homolog (S. cerevisiae)##L12387|SRI|6717|sorcin##AK295225|SRI|6717|sorcin##BC011025|SRI|6717|sorcin##M32886|SRI|6717|sorcin##AK129770|SRI|6717|sorcin##AK310366|SRI|6717|sorcin##NM_003130|SRI|6717|sorcin##AK296601|SRI|6717|sorcin##NM_198901|SRI|6717|sorcin	0.995149	CTCF.p2:11:0.995
chr1	28306243	28306375	reg1009307.p1	11.404	+	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-19791	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-44748	+	TSC_hg19_v1_chr1_-_28241258 BC021257 NM_002946	-65045	-	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	108815	-	NM_000952 NM_001164723	197145	-	S52624 AK292053 NM_001164721 NM_001164722	214103	-	AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC021257|RPA2|6118|replication protein A2, 32kDa##NM_002946|RPA2|6118|replication protein A2, 32kDa##BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor	0.999316	CTCF.p2:15:0.999
chr13	111875855	111875992	reg1007166.p1	11.404	+	AK300272 TSC_hg19_v1_chr13_+_111855425	-20501	+	NM_001113513 BC050521	-36737	+	TSC_hg19_v1_chr13_+_111806070 D63476	-69845	+	BC029889 NM_152324	97091	+	NM_005986	845989	+	AK130866 NM_145248 BC016750	1154736	+	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113513|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC050521|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##D63476|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC029889|C13orf16|121793|chromosome 13 open reading frame 16##NM_152324|C13orf16|121793|chromosome 13 open reading frame 16##NM_005986|SOX1|6656|SRY (sex determining region Y)-box 1##AK130866|SPACA7|122258|sperm acrosome associated 7##NM_145248|SPACA7|122258|sperm acrosome associated 7##BC016750|SPACA7|122258|sperm acrosome associated 7	0.966923	CTCF.p2:3:0.967
chr4	36415997	36416157	reg1010065.p1	11.403	+	BC157885 NM_001170700	-130434	+	AK131492 NM_001136536 AK304357 AK316523	-132831	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	-170040	-	NM_001144990	830612	+	NM_001104629 BC037906	1039498	+	AK001879 NM_018302 AK225192	1169792	+	BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_001144990|KIAA1239|57495|KIAA1239##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19	0.072784	
chr5	137157974	137158092	reg1007489.p1	11.403	+	TSC_hg19_v1_chr5_-_137090053 AK311328	-67961	-	BC012980 BC018949 TSC_hg19_v1_chr5_-_137090040 BC028976 BC030249 NM_006805	-67994	-	TSC_hg19_v1_chr5_-_137090036 BC018800	-67999	-	NM_001135940 NM_006790 AK300088 TSC_hg19_v1_chr5_+_137203548	45513	+	AF133820 AK300076 AK307620 AK312733 BC005376 TSC_hg19_v1_chr5_+_137203565 AF144477	45533	+	NM_014386 BC044581 AK301924 BC038714 AF182034 AF118125 CU692208	67118	+	BC012980|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC018949|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC028976|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC030249|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##NM_006805|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC018800|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##NM_001135940|MYOT|9499|myotilin##NM_006790|MYOT|9499|myotilin##AK300088|MYOT|9499|myotilin##AF133820|MYOT|9499|myotilin##AK300076|MYOT|9499|myotilin##AK307620|MYOT|9499|myotilin##AK312733|MYOT|9499|myotilin##BC005376|MYOT|9499|myotilin##AF144477|MYOT|9499|myotilin##NM_014386|PKD2L2|27039|polycystic kidney disease 2-like 2##BC044581|PKD2L2|27039|polycystic kidney disease 2-like 2##AK301924|PKD2L2|27039|polycystic kidney disease 2-like 2##BC038714|PKD2L2|27039|polycystic kidney disease 2-like 2##AF182034|PKD2L2|27039|polycystic kidney disease 2-like 2##AF118125|PKD2L2|27039|polycystic kidney disease 2-like 2	0.992109	CTCF.p2:6:0.992
chr8	21104402	21104513	reg1007728.p2	11.403	+	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	-991711	-	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	-1049535	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	-1049564	+	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	541335	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	541909	-	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	666708	-	AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa	0.990843	CTCF.p2:12:0.991
chr15	30390213	30390350	reg1007523.p2	11.402	+	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-275658	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-275939	-	NM_015307	-527355	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	295431	-	TSC_hg19_v1_chr15_+_30918372 BC071990	528105	+	BC105788 NM_001039841	528597	+	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B	1.164897	CTCF.p2:0:1.000
chr17	3767126	3767219	reg1005452.p2	11.402	+	TSC_hg19_v1_chr17_-_3749541 NM_001114118 NM_018553	-17662	-	TSC_hg19_v1_chr17_-_3704490 BC113436 BC117207 NM_002208	-62661	-	HQ258689 TSC_hg19_v1_chr17_-_3704463	-62719	-	AF425301 NM_172206	26864	-	BC031647 TSC_hg19_v1_chr17_-_3796278 AF425232 BC043487	29119	-	AL136576 NM_032294 NM_172207 TSC_hg19_v1_chr17_-_3796348	29171	-	NM_001114118|C17orf85|55421|chromosome 17 open reading frame 85##NM_018553|C17orf85|55421|chromosome 17 open reading frame 85##BC113436|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC117207|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_002208|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##HQ258689|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##AF425301|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_172206|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##BC031647|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##AF425232|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##BC043487|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##AL136576|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_032294|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_172207|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha	0.988002	CTCF.p2:-6:0.988
chr20	48225575	48225710	reg1010526.p1	11.402	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	-40953	-	BC110572 BC110573 NM_004975	-126463	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-330447	+	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	104588	-	AB004550 TSC_hg19_v1_chr20_-_48330359	104714	-	TSC_hg19_v1_chr20_-_48330471 NM_004776	104824	-	AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.990375	CTCF.p2:3:0.990
chr7	37026857	37026984	reg1007561.p2	11.402	+	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	-1200	-	BC064635 NM_001039459	-2230	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-262844	-	AK291784 NM_001206482	366351	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	461548	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	461635	-	D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1	0.245733	CTCF.p2:-12:0.246
chr9	91615990	91616133	reg1009720.p1	11.402	+	TSC_hg19_v1_chr9_+_91606382 AK312798 BC060827 NM_005226	-9691	+	AK094842 NM_001001938 NM_001142413 AK127854 BC144432 BC136895 AY333281	-10218	+	BC101432 BC101439 BC101440 BC101442 AK098532 NM_001100111	-349022	-	DQ896663 TSC_hg19_v1_chr9_-_91793449 D84361	177403	-	BC026314 NM_016848 TSC_hg19_v1_chr9_-_91793734	177649	-	TSC_hg19_v1_chr9_+_91926112 NM_001827 X54942 BC006458 AB527990 BT006630 CR407630 CR542118	310097	+	AK312798|S1PR3|1903|sphingosine-1-phosphate receptor 3##BC060827|S1PR3|1903|sphingosine-1-phosphate receptor 3##NM_005226|S1PR3|1903|sphingosine-1-phosphate receptor 3##AK094842|C9orf47|286223|chromosome 9 open reading frame 47##NM_001001938|C9orf47|286223|chromosome 9 open reading frame 47##NM_001142413|C9orf47|286223|chromosome 9 open reading frame 47##AK127854|C9orf47|286223|chromosome 9 open reading frame 47##BC144432|C9orf47|286223|chromosome 9 open reading frame 47##BC136895|C9orf47|286223|chromosome 9 open reading frame 47##AY333281|C9orf47|286223|chromosome 9 open reading frame 47##BC101432|LOC286238|286238|uncharacterized LOC286238##BC101439|LOC286238|286238|uncharacterized LOC286238##BC101440|LOC286238|286238|uncharacterized LOC286238##BC101442|LOC286238|286238|uncharacterized LOC286238##AK098532|LOC286238|286238|uncharacterized LOC286238##NM_001100111|LOC286238|286238|uncharacterized LOC286238##DQ896663|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##D84361|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2##X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2	0.897437	CTCF.p2:15:0.897
chr13	21063458	21063574	reg1007038.p2	11.401	+	NM_001110219 NM_001110220 NM_001110221	-256983	-	NM_006783	-258145	-	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	-296405	-	BC119660 BC119661 TSC_hg19_v1_chr13_-_21099959 AF160216 AF077049 AF087898 AK024041 BC071810 NM_015974	36457	-	NM_006531 NM_175605 U20362 TSC_hg19_v1_chr13_+_21141275 BC030776	77725	+	TSC_hg19_v1_chr13_+_21141298 AK300769 AK310223 AK308281 AK303853 BC059357	77790	+	NM_001110219|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110220|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110221|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa##AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa##BC119660|CRYL1|51084|crystallin, lambda 1##BC119661|CRYL1|51084|crystallin, lambda 1##AF160216|CRYL1|51084|crystallin, lambda 1##AF077049|CRYL1|51084|crystallin, lambda 1##AF087898|CRYL1|51084|crystallin, lambda 1##AK024041|CRYL1|51084|crystallin, lambda 1##BC071810|CRYL1|51084|crystallin, lambda 1##NM_015974|CRYL1|51084|crystallin, lambda 1##NM_006531|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##NM_175605|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##U20362|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC030776|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK300769|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK310223|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK308281|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK303853|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC059357|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)	0.083144	
chr2	73089780	73089915	reg1010355.p1	11.401	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	-36743	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	-714905	-	AK295683 TSC_hg19_v1_chr2_-_72371202	-718648	-	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	24683	+	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	54806	+	TSC_hg19_v1_chr2_-_73298414 AK024193	208589	-	AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1##AK024193|SFXN5|94097|sideroflexin 5	0.997458	CTCF.p2:-9:0.997
chr7	76754927	76755058	reg1008496.p1	11.401	+	BC036053 NM_020879 BX649000 AK292491 HM370402	-3046	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-498445	-	TSC_hg19_v1_chr7_-_76256148 BC017101	-498789	-	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	74144	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	290726	-	TSC_hg19_v1_chr7_+_77166392 BC050008	411386	+	BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC017101|POMZP3|22932|POM121 and ZP3 fusion##GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)##BC050008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	0.224979	CTCF.p2:-8:0.225
chr2	127807838	127807971	reg1010152.p1	11.400	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-394112	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-394197	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-3025040	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	56837	-	BC039307 NM_001001665	155438	-	AK131190 TSC_hg19_v1_chr2_-_127977781	169813	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	1.041962	CTCF.p2:4:1.000
chr12	19892288	19892406	reg1007047.p1	11.399	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-299159	+	TSC_hg19_v1_chr12_+_19592783 AB209384	-299552	+	TSC_hg19_v1_chr12_+_19592425 AK131361 NM_001114176 NM_153207 AK126973 BC022220	-299828	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	629851	+	AK308317 NM_001244683	832450	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	956148	+	BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##AK131361|AEBP2|121536|AE binding protein 2##NM_001114176|AEBP2|121536|AE binding protein 2##NM_153207|AEBP2|121536|AE binding protein 2##AK126973|AEBP2|121536|AE binding protein 2##BC022220|AEBP2|121536|AE binding protein 2##BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	0.999356	CTCF.p2:-22:0.999
chr6	40974020	40974118	reg1007405.p1	11.399	+	BC142616 AB033072 NM_020737 AK291474	-418925	-	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-1071855	-	AB527188 AJ224328 NM_005943	-1078684	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	32880	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	36277	+	AK223461 AK308197 AK310006 AK313288 NM_006789 BC047767 AF161698 BC069688 BC069764 AK300689	46930	+	BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2##AK223461|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK308197|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK310006|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK313288|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##NM_006789|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC047767|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AF161698|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069688|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069764|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK300689|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2	0.962191	CTCF.p2:-1:0.962
chr7	55665737	55665856	reg1010107.p1	11.399	+	TSC_hg19_v1_chr7_-_55640198 NM_030796	-25586	-	TSC_hg19_v1_chr7_-_55640196 AK075391 AK225755	-25633	-	BC016650 AK314338 TSC_hg19_v1_chr7_-_55640107	-25691	-	AK301928 NM_207366	264666	-	TSC_hg19_v1_chr7_+_55955148 BC094796 BC048108	289373	+	AK097282 NM_182633 AB464411	314552	+	NM_030796|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK075391|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK225755|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##BC016650|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK314338|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK301928|SEPT14|346288|septin 14##NM_207366|SEPT14|346288|septin 14##BC094796|ZNF713|349075|zinc finger protein 713##AK097282|ZNF713|349075|zinc finger protein 713##NM_182633|ZNF713|349075|zinc finger protein 713	0.917033	CTCF.p2:5:0.917
chr14	105292867	105292965	reg1007394.p2	11.398	+	TSC_hg19_v1_chr14_+_105267378 BC157833 BC171822	-25474	+	TSC_hg19_v1_chr14_+_105266890 AX721091 NM_001137601	-25996	+	TSC_hg19_v1_chr14_-_105262083 NM_001014431 NM_001014432	-30835	-	TSC_hg19_v1_chr14_+_105331604 AB006622 NM_001112726 NM_015005	38764	+	TSC_hg19_v1_chr14_+_105391152 AK296188	98235	+	TSC_hg19_v1_chr14_+_105391155 AK295352	98241	+	BC157833|ZBTB42|100128927|zinc finger and BTB domain containing 42##BC171822|ZBTB42|100128927|zinc finger and BTB domain containing 42##AX721091|ZBTB42|100128927|zinc finger and BTB domain containing 42##NM_001137601|ZBTB42|100128927|zinc finger and BTB domain containing 42##NM_001014431|AKT1|207|v-akt murine thymoma viral oncogene homolog 1##NM_001014432|AKT1|207|v-akt murine thymoma viral oncogene homolog 1##AB006622|KIAA0284|283638|KIAA0284##NM_001112726|KIAA0284|283638|KIAA0284##NM_015005|KIAA0284|283638|KIAA0284##AK296188|PLD4|122618|phospholipase D family, member 4##AK295352|PLD4|122618|phospholipase D family, member 4	0.989976	CTCF.p2:14:0.990
chr6	107056069	107056207	reg1009491.p1	11.398	+	TSC_hg19_v1_chr6_+_106960443 U83115	-95727	+	AK056705 NM_001624	-96409	+	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	-282475	-	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	21142	-	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	21359	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	293334	+	U83115|AIM1|202|absent in melanoma 1##AK056705|AIM1|202|absent in melanoma 1##NM_001624|AIM1|202|absent in melanoma 1##CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203	0.150338	
chr10	50189517	50189629	reg1004954.p1	11.397	+	NM_001006939 BC036722	-67293	-	AK127650 NM_020945	-296058	+	TSC_hg19_v1_chr10_+_49892917 BC034937	-296683	+	TSC_hg19_v1_chr10_-_50323537 BC041414 AK297931 AK056299 NM_001031746 NM_144984	133950	-	BC029839 BC047597 NM_001164484	152485	-	DQ884399 TSC_hg19_v1_chr10_-_50396437 BC047724 BC104438 BC104439 NM_001010863 BC037922 BC042857 AK303891	206853	-	NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18##AK127650|WDFY4|57705|WDFY family member 4##NM_020945|WDFY4|57705|WDFY family member 4##BC034937|WDFY4|57705|WDFY family member 4##BC041414|VSTM4|196740|V-set and transmembrane domain containing 4##AK297931|VSTM4|196740|V-set and transmembrane domain containing 4##AK056299|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001031746|VSTM4|196740|V-set and transmembrane domain containing 4##NM_144984|VSTM4|196740|V-set and transmembrane domain containing 4##BC029839|FAM170B|170370|family with sequence similarity 170, member B##BC047597|FAM170B|170370|family with sequence similarity 170, member B##NM_001164484|FAM170B|170370|family with sequence similarity 170, member B##DQ884399|C10orf128|170371|chromosome 10 open reading frame 128##BC047724|C10orf128|170371|chromosome 10 open reading frame 128##BC104438|C10orf128|170371|chromosome 10 open reading frame 128##BC104439|C10orf128|170371|chromosome 10 open reading frame 128##NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128##BC037922|C10orf128|170371|chromosome 10 open reading frame 128##BC042857|C10orf128|170371|chromosome 10 open reading frame 128	0.999362	CTCF.p2:-14:0.999
chr7	130754122	130754228	reg1007769.p2	11.397	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-335248	-	AF294347 AF431815 BC038415 NM_052933	-382820	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-400580	-	TSC_hg19_v1_chr7_-_130792857 BC047367	38684	-	AK294384 NM_001145354	40679	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	258431	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.0	
chr14	106026189	106026295	reg1007485.p3	11.396	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-33301	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-68606	+	BX248038 NM_001134877	-69723	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	66094	-	BC040042 TSC_hg19_v1_chr14_-_106110945	84681	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	84874	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.836909	CTCF.p2:-32:0.837
chr19	49178750	49178881	reg1010132.p1	11.396	+	BC018654 BC018697 BC033207 NM_145807 BC021210	-2542	-	AF067662 AB018195 TSC_hg19_v1_chr19_-_49149299 AY358967 NM_001217	-29464	-	AB208807 TSC_hg19_v1_chr19_-_49140623 BC011965 U79283 AK310025 NM_001352	-38211	-	NM_000511 NM_001097638 AK290277 D87942 BC001899 BC121066	20446	+	AK093389 AX748093 NM_182574 BC106047	41430	-	TSC_hg19_v1_chr19_-_49222963 NM_001130915 AK131427	44151	-	BC018654|NTN5|126147|netrin 5##BC018697|NTN5|126147|netrin 5##BC033207|NTN5|126147|netrin 5##NM_145807|NTN5|126147|netrin 5##BC021210|NTN5|126147|netrin 5##AF067662|CA11|770|carbonic anhydrase XI##AB018195|CA11|770|carbonic anhydrase XI##AY358967|CA11|770|carbonic anhydrase XI##NM_001217|CA11|770|carbonic anhydrase XI##AB208807|DBP|1628|D site of albumin promoter (albumin D-box) binding protein##BC011965|DBP|1628|D site of albumin promoter (albumin D-box) binding protein##U79283|DBP|1628|D site of albumin promoter (albumin D-box) binding protein##AK310025|DBP|1628|D site of albumin promoter (albumin D-box) binding protein##NM_001352|DBP|1628|D site of albumin promoter (albumin D-box) binding protein##NM_000511|FUT2|2524|fucosyltransferase 2 (secretor status included)##NM_001097638|FUT2|2524|fucosyltransferase 2 (secretor status included)##AK290277|FUT2|2524|fucosyltransferase 2 (secretor status included)##D87942|FUT2|2524|fucosyltransferase 2 (secretor status included)##BC001899|FUT2|2524|fucosyltransferase 2 (secretor status included)##BC121066|FUT2|2524|fucosyltransferase 2 (secretor status included)##AK093389|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator##NM_182574|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator##BC106047|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator##NM_001130915|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator##AK131427|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator	0.889604	CTCF.p2:6:0.890
chr4	16796618	16796718	reg1007384.p1	11.395	+	TSC_hg19_v1_chr4_+_16228615 AK093550 AX748197 BC010030	-568032	+	TSC_hg19_v1_chr4_+_16228285 AK096972 BC132927	-568373	+	TSC_hg19_v1_chr4_-_16228103 BC066899 NM_153365	-568531	-	AK300119 AB463834 DQ891981 DQ895171 AK312881 TSC_hg19_v1_chr4_-_16900210 AF068651 AF047337 AF064492 AF064493 BC034019	103458	-	AK226029 TSC_hg19_v1_chr4_-_16900258	103591	-	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	103717	-	AK093550|FLJ39653|202020|uncharacterized FLJ39653##BC010030|FLJ39653|202020|uncharacterized FLJ39653##AK096972|FLJ39653|202020|uncharacterized FLJ39653##BC132927|FLJ39653|202020|uncharacterized FLJ39653##BC066899|TAPT1|202018|transmembrane anterior posterior transformation 1##NM_153365|TAPT1|202018|transmembrane anterior posterior transformation 1##AK300119|LDB2|9079|LIM domain binding 2##DQ891981|LDB2|9079|LIM domain binding 2##DQ895171|LDB2|9079|LIM domain binding 2##AK312881|LDB2|9079|LIM domain binding 2##AF068651|LDB2|9079|LIM domain binding 2##AF047337|LDB2|9079|LIM domain binding 2##AF064492|LDB2|9079|LIM domain binding 2##AF064493|LDB2|9079|LIM domain binding 2##BC034019|LDB2|9079|LIM domain binding 2##AK226029|LDB2|9079|LIM domain binding 2##AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2	0.999372	CTCF.p2:-5:0.999
chr13	30909347	30909468	reg1008139.p1	11.394	+	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-27838	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	-28256	-	TSC_hg19_v1_chr13_-_30424811 NM_007106	-484566	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	130586	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	130651	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	282220	-	AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##NM_007106|UBL3|5412|ubiquitin-like 3##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1	0.515569	CTCF.p2:1:0.516
chr9	116844891	116845024	reg1011269.p1	11.394	+	TSC_hg19_v1_chr9_-_116840705 AK310776 BC041593 NM_001633	-4243	-	TSC_hg19_v1_chr9_-_116840651 AK310791	-4320	-	TSC_hg19_v1_chr9_-_116840581 X04225 AK290837	-4388	-	BC010626 NM_138424	16379	-	BC036824 TSC_hg19_v1_chr9_-_116861573	16585	-	TSC_hg19_v1_chr9_+_116917816 BC035728	72854	+	AK310776|AMBP|259|alpha-1-microglobulin/bikunin precursor##BC041593|AMBP|259|alpha-1-microglobulin/bikunin precursor##NM_001633|AMBP|259|alpha-1-microglobulin/bikunin precursor##AK310791|AMBP|259|alpha-1-microglobulin/bikunin precursor##X04225|AMBP|259|alpha-1-microglobulin/bikunin precursor##AK290837|AMBP|259|alpha-1-microglobulin/bikunin precursor##BC010626|KIF12|113220|kinesin family member 12##NM_138424|KIF12|113220|kinesin family member 12##BC036824|KIF12|113220|kinesin family member 12##BC035728|COL27A1|85301|collagen, type XXVII, alpha 1	0.999919	CTCF.p2:-7:1.000
chr17	72919741	72919816	reg1005512.p1	11.392	+	BC101096 BC101097 BC101098 BC101099 AK091243 AK296899 AX746872 NM_173477 AK289804	-479	-	NM_178128 AY203929 BC117230 AK094411	-30057	-	BT006684 CU678312 AB463633 AK223530 J03826 AK098648 AK293210 AK301779 BC063493 BC002960 AK298908 AK094120 AK293208 BC018911 BC034763 BC011521 AK295307 NM_004110 NM_024417	-50667	-	AK000063 NM_178160	591	+	BC143799 AB463989 NM_178233 AB593153	12116	+	CU690082 AB527292 TSC_hg19_v1_chr17_-_72968758	48976	-	BC101096|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101097|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101098|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101099|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK091243|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK296899|USH1G|124590|Usher syndrome 1G (autosomal recessive)##NM_173477|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK289804|USH1G|124590|Usher syndrome 1G (autosomal recessive)##NM_178128|FADS6|283985|fatty acid desaturase domain family, member 6##AY203929|FADS6|283985|fatty acid desaturase domain family, member 6##BC117230|FADS6|283985|fatty acid desaturase domain family, member 6##AK094411|FADS6|283985|fatty acid desaturase domain family, member 6##BT006684|FDXR|2232|ferredoxin reductase##AK223530|FDXR|2232|ferredoxin reductase##J03826|FDXR|2232|ferredoxin reductase##AK098648|FDXR|2232|ferredoxin reductase##AK293210|FDXR|2232|ferredoxin reductase##AK301779|FDXR|2232|ferredoxin reductase##BC063493|FDXR|2232|ferredoxin reductase##BC002960|FDXR|2232|ferredoxin reductase##AK298908|FDXR|2232|ferredoxin reductase##AK094120|FDXR|2232|ferredoxin reductase##AK293208|FDXR|2232|ferredoxin reductase##BC018911|FDXR|2232|ferredoxin reductase##BC034763|FDXR|2232|ferredoxin reductase##BC011521|FDXR|2232|ferredoxin reductase##AK295307|FDXR|2232|ferredoxin reductase##NM_004110|FDXR|2232|ferredoxin reductase##NM_024417|FDXR|2232|ferredoxin reductase##AK000063|OTOP2|92736|otopetrin 2##NM_178160|OTOP2|92736|otopetrin 2##BC143799|OTOP3|347741|otopetrin 3##NM_178233|OTOP3|347741|otopetrin 3##AB593153|OTOP3|347741|otopetrin 3	0.994264	CTCF.p2:8:0.994
chr1	94491552	94491679	reg1008358.p1	11.392	+	TSC_hg19_v1_chr1_-_94375075 AK290449	-116525	-	TSC_hg19_v1_chr1_-_94374987 NM_002061	-116611	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	-116653	-	AF001945 U88667 AK295818 AF000148 AB210040 DQ426859 NM_000350	95076	-	TSC_hg19_v1_chr1_-_94703141 BC093767 U90920 AK307733 BC022483	211449	-	TSC_hg19_v1_chr1_-_94703252 BC067839 NM_004815	211664	-	AK290449|GCLM|2730|glutamate-cysteine ligase, modifier subunit##NM_002061|GCLM|2730|glutamate-cysteine ligase, modifier subunit##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit##AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##BC093767|ARHGAP29|9411|Rho GTPase activating protein 29##U90920|ARHGAP29|9411|Rho GTPase activating protein 29##AK307733|ARHGAP29|9411|Rho GTPase activating protein 29##BC022483|ARHGAP29|9411|Rho GTPase activating protein 29##BC067839|ARHGAP29|9411|Rho GTPase activating protein 29##NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29	0.999372	CTCF.p2:-5:0.999
chr21	30848903	30849011	reg1007524.p1	11.392	+	AF026199 NM_206866	-177221	+	TSC_hg19_v1_chr21_+_30671242 AK313791 BC063307	-177716	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	-177737	+	L19058 NM_000830 NM_175611 AK296404 BC028238	463332	-	BC101503 BC101505 NM_012131 AY358094	690049	-	AB590283 CU676754 DQ892002 DQ895192 BC058004 AY358707 BC020866 AK223512 AK022269 NM_199328	739398	-	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AK313791|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC063307|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##L19058|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_000830|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_175611|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##AK296404|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC028238|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC101503|CLDN17|26285|claudin 17##BC101505|CLDN17|26285|claudin 17##NM_012131|CLDN17|26285|claudin 17##AY358094|CLDN17|26285|claudin 17##DQ892002|CLDN8|9073|claudin 8##DQ895192|CLDN8|9073|claudin 8##BC058004|CLDN8|9073|claudin 8##AY358707|CLDN8|9073|claudin 8##BC020866|CLDN8|9073|claudin 8##AK223512|CLDN8|9073|claudin 8##AK022269|CLDN8|9073|claudin 8##NM_199328|CLDN8|9073|claudin 8	0.989989	CTCF.p2:-7:0.990
chr3	132118256	132118379	reg1006819.p1	11.392	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	-82029	+	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	-82079	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	-364477	-	AB014578 BC151246 TSC_hg19_v1_chr3_+_132136540 AY779857 BC043583 NM_015268	18210	+	AK304461 NM_016557 AK313923 AF110640 BC069438	197791	+	NM_178445	200663	+	M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##AB014578|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC151246|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AY779857|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC043583|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##NM_015268|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AK304461|CCRL1|51554|chemokine (C-C motif) receptor-like 1##NM_016557|CCRL1|51554|chemokine (C-C motif) receptor-like 1##AK313923|CCRL1|51554|chemokine (C-C motif) receptor-like 1##AF110640|CCRL1|51554|chemokine (C-C motif) receptor-like 1##BC069438|CCRL1|51554|chemokine (C-C motif) receptor-like 1##NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1	0.796908	CTCF.p2:34:0.797
chr10	96943467	96943619	reg1008666.p2	11.391	+	M21942 M21941 DQ891400 DQ894579 M17397 M17398 AK303813 Y00498 AK292753 AK293327 AK293328 AK298401 AK315823 BC020596 NM_000770 NM_001198853 NM_001198854 NM_001198855	-114380	-	TSC_hg19_v1_chr10_+_96698414 AK289420 AK298458 BC020754 NM_000771 BC070317 M61855 M61857 BC125054 D00173 M21939 M15331 S46963	-245101	+	M61854 AB463557 NM_000769	-421084	+	AK126134 NM_207321	10413	+	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	107239	-	AM393082 NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_006434	257372	-	M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61854|CYP2C19|1557|cytochrome P450, family 2, subfamily C, polypeptide 19##NM_000769|CYP2C19|1557|cytochrome P450, family 2, subfamily C, polypeptide 19##AK126134|C10orf129|142827|chromosome 10 open reading frame 129##NM_207321|C10orf129|142827|chromosome 10 open reading frame 129##AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1##AM393082|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1##NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1	1.307835	CTCF.p2:-19:0.995	CTCF.p2:72:0.313
chr1	115655520	115655648	reg1009263.p1	11.391	+	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	-23468	-	NM_000549	-83170	+	NM_003176 BC026162 AK315268 AF273043 BC105299 BC126266 BC144019 BC144020 BC065190 X95654	-258072	+	BC032517 NM_002506 X52599	225269	-	NM_001172411 NM_138959 BC065272 AF481859	529008	+	AB057596 NM_001172412	529665	+	AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##NM_000549|TSHB|7252|thyroid stimulating hormone, beta##NM_003176|SYCP1|6847|synaptonemal complex protein 1##BC026162|SYCP1|6847|synaptonemal complex protein 1##AK315268|SYCP1|6847|synaptonemal complex protein 1##AF273043|SYCP1|6847|synaptonemal complex protein 1##BC105299|SYCP1|6847|synaptonemal complex protein 1##BC126266|SYCP1|6847|synaptonemal complex protein 1##BC144019|SYCP1|6847|synaptonemal complex protein 1##BC144020|SYCP1|6847|synaptonemal complex protein 1##BC065190|SYCP1|6847|synaptonemal complex protein 1##X95654|SYCP1|6847|synaptonemal complex protein 1##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)	0.997032	CTCF.p2:19:0.997
chr1	242181079	242181178	reg1007743.p1	11.391	+	BC132986 BC132988 AF276659 BC127722 NM_001004343	-18754	-	NM_003686 NM_006027 AF042282 AF091740 AF060479 AF084974	-169043	+	BC007491 TSC_hg19_v1_chr1_+_242011556	-169578	+	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	431642	-	AK098092 NM_152666	506869	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	1237228	-	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_003686|EXO1|9156|exonuclease 1##NM_006027|EXO1|9156|exonuclease 1##AF042282|EXO1|9156|exonuclease 1##AF091740|EXO1|9156|exonuclease 1##AF060479|EXO1|9156|exonuclease 1##AF084974|EXO1|9156|exonuclease 1##BC007491|EXO1|9156|exonuclease 1##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa	0.947035	CTCF.p2:-19:0.947
chr19	44156592	44156691	reg1007456.p1	11.391	+	AB528095 TSC_hg19_v1_chr19_-_44143948 BC068457 AK313028 AF363368 BC113963 NM_145296	-12654	-	NM_182498	-32628	-	BC015950 TSC_hg19_v1_chr19_-_44123754 AY257197 BC045799	-32892	-	AF257789 CR456952 AB464026 DQ893017 DQ896262 M83246 TSC_hg19_v1_chr19_-_44174320 AK290774 AY029180 X51675 X74039 BC002788	17662	-	NM_001005376 NM_001005377 NM_002659	17856	-	BC033853 NM_019612 BC066939	63584	+	BC068457|CADM4|199731|cell adhesion molecule 4##AK313028|CADM4|199731|cell adhesion molecule 4##AF363368|CADM4|199731|cell adhesion molecule 4##BC113963|CADM4|199731|cell adhesion molecule 4##NM_145296|CADM4|199731|cell adhesion molecule 4##NM_182498|ZNF428|126299|zinc finger protein 428##BC015950|ZNF428|126299|zinc finger protein 428##AY257197|ZNF428|126299|zinc finger protein 428##BC045799|ZNF428|126299|zinc finger protein 428##AF257789|PLAUR|5329|plasminogen activator, urokinase receptor##CR456952|PLAUR|5329|plasminogen activator, urokinase receptor##DQ893017|PLAUR|5329|plasminogen activator, urokinase receptor##DQ896262|PLAUR|5329|plasminogen activator, urokinase receptor##M83246|PLAUR|5329|plasminogen activator, urokinase receptor##AK290774|PLAUR|5329|plasminogen activator, urokinase receptor##AY029180|PLAUR|5329|plasminogen activator, urokinase receptor##X51675|PLAUR|5329|plasminogen activator, urokinase receptor##X74039|PLAUR|5329|plasminogen activator, urokinase receptor##BC002788|PLAUR|5329|plasminogen activator, urokinase receptor##NM_001005376|PLAUR|5329|plasminogen activator, urokinase receptor##NM_001005377|PLAUR|5329|plasminogen activator, urokinase receptor##NM_002659|PLAUR|5329|plasminogen activator, urokinase receptor##BC033853|IRGC|56269|immunity-related GTPase family, cinema##NM_019612|IRGC|56269|immunity-related GTPase family, cinema##BC066939|IRGC|56269|immunity-related GTPase family, cinema	0.975038	CTCF.p2:-4:0.975
chr11	76518566	76518675	reg1007563.p1	11.390	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	-24343	+	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	-136811	-	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	-137652	-	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	53312	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	53373	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	226839	+	NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3##NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)	0.999552	CTCF.p2:13:1.000
chr7	21807034	21807174	reg1004151.p1	11.390	+	AJ320497 NM_003777	-224272	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-338780	+	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	-339285	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	178378	-	AL833195 NM_012294	589417	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	732743	-	AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B	0.635324	CTCF.p2:-23:0.635
chr1	204332910	204333036	reg1007479.p2	11.389	+	AB023186 BC152475 NM_014935 TSC_hg19_v1_chr1_-_204329058	-3923	-	CU691306 TSC_hg19_v1_chr1_-_204183117 AB075871 BC058832 AK124645 NM_198447	-149846	-	AF218017 BC022819 AK291695 NM_002256 TSC_hg19_v1_chr1_-_204165620	-167392	-	TSC_hg19_v1_chr1_+_204380508 BC009873	47548	+	TSC_hg19_v1_chr1_-_204380946 BC065280 AK222877 NM_032833 AK027650 AK303535 AK316092	47967	-	BC132876 BC136645 BC144342 NM_002646 AK308153	126525	-	AB023186|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC152475|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##NM_014935|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##AB075871|GOLT1A|127845|golgi transport 1A##BC058832|GOLT1A|127845|golgi transport 1A##AK124645|GOLT1A|127845|golgi transport 1A##NM_198447|GOLT1A|127845|golgi transport 1A##AF218017|KISS1|3814|KiSS-1 metastasis-suppressor##BC022819|KISS1|3814|KiSS-1 metastasis-suppressor##AK291695|KISS1|3814|KiSS-1 metastasis-suppressor##NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor##BC065280|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK222877|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_032833|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK027650|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK303535|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##BC132876|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC136645|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC144342|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_002646|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AK308153|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide	0.681877	CTCF.p2:0:0.682
chr2	30387995	30388117	reg1006540.p1	11.389	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-18180	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	-18223	+	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	-18286	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	66446	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	282092	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	642237	-	AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13	1.082049	CTCF.p2:-43:0.825	CTCF.p2:60:0.257
chr1	208058539	208058659	reg1007601.p1	11.388	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	-133116	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	-133206	+	NM_175710 BC109190 BC109191	-240112	+	BX640941 TSC_hg19_v1_chr1_-_208059392	724	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	25784	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	25958	-	BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule	0.999587	CTCF.p2:-5:1.000
chr14	24777426	24777540	reg1007947.p2	11.388	+	TSC_hg19_v1_chr14_-_24777184 BC035970	-297	-	AF544398 TSC_hg19_v1_chr14_-_24777163	-315	-	AK000387 TSC_hg19_v1_chr14_-_24777155	-329	-	NM_001164692 NM_019839 AK304169 BC038437 AB032558	1890	+	TSC_hg19_v1_chr14_-_24780610 NM_014430 BC000982 AF190901	3109	-	TSC_hg19_v1_chr14_-_24780632 BC050376	3148	-	BC035970|CIDEB|27141|cell death-inducing DFFA-like effector b##AF544398|CIDEB|27141|cell death-inducing DFFA-like effector b##AK000387|CIDEB|27141|cell death-inducing DFFA-like effector b##NM_001164692|LTB4R2|56413|leukotriene B4 receptor 2##NM_019839|LTB4R2|56413|leukotriene B4 receptor 2##AK304169|LTB4R2|56413|leukotriene B4 receptor 2##BC038437|LTB4R2|56413|leukotriene B4 receptor 2##AB032558|LTB4R2|56413|leukotriene B4 receptor 2##NM_014430|CIDEB|27141|cell death-inducing DFFA-like effector b##BC000982|CIDEB|27141|cell death-inducing DFFA-like effector b##AF190901|CIDEB|27141|cell death-inducing DFFA-like effector b	0.999085	CTCF.p2:2:0.999
chr2	171217961	171218101	reg1009949.p1	11.387	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	-183346	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-534073	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-536646	-	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	353827	+	TSC_hg19_v1_chr2_+_171571942 AB464708	353946	+	TSC_hg19_v1_chr2_+_171572707 BC069026	354679	+	AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##BC069026|SP5|389058|Sp5 transcription factor	0.997682	CTCF.p2:-8:0.998
chr2	175022851	175022981	reg1009656.p1	11.387	+	AY441957 NM_001172712 NM_003111	-192487	-	BC126414 BC143928 AK304199 TSC_hg19_v1_chr2_-_174830067	-192907	-	TSC_hg19_v1_chr2_-_174829232 AJ310752 AJ430844 AY441958 AB528284	-193722	-	BC068447 TSC_hg19_v1_chr2_-_175113235 BC013925 BC091522 DQ250006	90301	-	TSC_hg19_v1_chr2_-_175113245 AK296339 BC029376 AF134478	90329	-	TSC_hg19_v1_chr2_-_175113261 AK225112 AF078868	90354	-	AY441957|SP3|6670|Sp3 transcription factor##NM_001172712|SP3|6670|Sp3 transcription factor##NM_003111|SP3|6670|Sp3 transcription factor##BC126414|SP3|6670|Sp3 transcription factor##BC143928|SP3|6670|Sp3 transcription factor##AK304199|SP3|6670|Sp3 transcription factor##AJ310752|SP3|6670|Sp3 transcription factor##AY441958|SP3|6670|Sp3 transcription factor##BC068447|OLA1|29789|Obg-like ATPase 1##BC013925|OLA1|29789|Obg-like ATPase 1##BC091522|OLA1|29789|Obg-like ATPase 1##DQ250006|OLA1|29789|Obg-like ATPase 1##AK296339|OLA1|29789|Obg-like ATPase 1##BC029376|OLA1|29789|Obg-like ATPase 1##AF134478|OLA1|29789|Obg-like ATPase 1##AK225112|OLA1|29789|Obg-like ATPase 1##AF078868|OLA1|29789|Obg-like ATPase 1	0.996767	CTCF.p2:-2:0.997
chr3	138313625	138313751	reg1007538.p1	11.387	+	TSC_hg19_v1_chr3_-_138313097 AF202146 AF289495 AK225440 AK299003 AK295866 AK294587 AK301913 BC030598 NM_024491 AK314314	-578	-	TSC_hg19_v1_chr3_+_138153427 BC037292 AK125080 AK289530	-160249	+	NM_031913 TSC_hg19_v1_chr3_+_138153418	-160272	+	AK125477 TSC_hg19_v1_chr3_+_138327450	13760	+	NM_001033030 NM_001033031 NM_001033032 TSC_hg19_v1_chr3_+_138327638 BC012478	13928	+	AK001444 NM_018147	14230	+	AF202146|CEP70|80321|centrosomal protein 70kDa##AF289495|CEP70|80321|centrosomal protein 70kDa##AK225440|CEP70|80321|centrosomal protein 70kDa##AK299003|CEP70|80321|centrosomal protein 70kDa##AK295866|CEP70|80321|centrosomal protein 70kDa##AK294587|CEP70|80321|centrosomal protein 70kDa##AK301913|CEP70|80321|centrosomal protein 70kDa##BC030598|CEP70|80321|centrosomal protein 70kDa##NM_024491|CEP70|80321|centrosomal protein 70kDa##AK314314|CEP70|80321|centrosomal protein 70kDa##BC037292|ESYT3|83850|extended synaptotagmin-like protein 3##AK125080|ESYT3|83850|extended synaptotagmin-like protein 3##AK289530|ESYT3|83850|extended synaptotagmin-like protein 3##NM_031913|ESYT3|83850|extended synaptotagmin-like protein 3##AK125477|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033030|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033031|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033032|FAIM|55179|Fas apoptotic inhibitory molecule##BC012478|FAIM|55179|Fas apoptotic inhibitory molecule##AK001444|FAIM|55179|Fas apoptotic inhibitory molecule##NM_018147|FAIM|55179|Fas apoptotic inhibitory molecule	0.250917	CTCF.p2:8:0.251
chrX	101054416	101054540	reg1010300.p1	11.386	+	BC052628 AB011084 BC012541 BX648494 TSC_hg19_v1_chrX_-_100914836 AK291342 NM_014782 NM_177949	-139639	-	NM_177948	-176128	+	TSC_hg19_v1_chrX_+_100878175 AK291225 NM_016607 NM_177947 BX647802 AF208859 AK222655 AB039669 BC005194 CR933656	-176337	+	AJ277654 AJ277655 AJ277656 AJ277657 AJ277658 NM_032946	58070	-	TSC_hg19_v1_chrX_-_101187001 AK094141 AK296520 NM_001011657	132538	-	NM_080390 AK312138 AF325115	326208	+	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2##AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2##BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2##BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2##AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2##NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2##NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2##NM_177948|ARMCX3|51566|armadillo repeat containing, X-linked 3##AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3##BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3##AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3##AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3##BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3##CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3##AJ277654|NXF5|55998|nuclear RNA export factor 5##AJ277655|NXF5|55998|nuclear RNA export factor 5##AJ277656|NXF5|55998|nuclear RNA export factor 5##AJ277657|NXF5|55998|nuclear RNA export factor 5##AJ277658|NXF5|55998|nuclear RNA export factor 5##NM_032946|NXF5|55998|nuclear RNA export factor 5##AK094141|ZMAT1|84460|zinc finger, matrin-type 1##AK296520|ZMAT1|84460|zinc finger, matrin-type 1##NM_001011657|ZMAT1|84460|zinc finger, matrin-type 1##NM_080390|TCEAL2|140597|transcription elongation factor A (SII)-like 2##AK312138|TCEAL2|140597|transcription elongation factor A (SII)-like 2##AF325115|TCEAL2|140597|transcription elongation factor A (SII)-like 2	0.987471	CTCF.p2:-4:0.987
chr10	50372755	50372872	reg1007460.p2	11.385	+	BC029839 BC047597 NM_001164484	-30755	-	TSC_hg19_v1_chr10_-_50323537 BC041414 AK297931 AK056299 NM_001031746 NM_144984	-49290	-	NM_001006939 BC036722	-250533	-	DQ884399 TSC_hg19_v1_chr10_-_50396437 BC047724 BC104438 BC104439 NM_001010863 BC037922 BC042857 AK303891	23613	-	AK127811 NM_001135196 NM_199459 TSC_hg19_v1_chr10_+_50507214 AL833265	134398	+	NM_001080520	227093	-	BC029839|FAM170B|170370|family with sequence similarity 170, member B##BC047597|FAM170B|170370|family with sequence similarity 170, member B##NM_001164484|FAM170B|170370|family with sequence similarity 170, member B##BC041414|VSTM4|196740|V-set and transmembrane domain containing 4##AK297931|VSTM4|196740|V-set and transmembrane domain containing 4##AK056299|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001031746|VSTM4|196740|V-set and transmembrane domain containing 4##NM_144984|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18##DQ884399|C10orf128|170371|chromosome 10 open reading frame 128##BC047724|C10orf128|170371|chromosome 10 open reading frame 128##BC104438|C10orf128|170371|chromosome 10 open reading frame 128##BC104439|C10orf128|170371|chromosome 10 open reading frame 128##NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128##BC037922|C10orf128|170371|chromosome 10 open reading frame 128##BC042857|C10orf128|170371|chromosome 10 open reading frame 128##AK127811|C10orf71|118461|chromosome 10 open reading frame 71##NM_001135196|C10orf71|118461|chromosome 10 open reading frame 71##NM_199459|C10orf71|118461|chromosome 10 open reading frame 71##AL833265|C10orf71|118461|chromosome 10 open reading frame 71##NM_001080520|DRGX|644168|dorsal root ganglia homeobox	0.383374	CTCF.p2:-2:0.383
chr12	62975697	62975825	reg1009244.p1	11.385	+	AK022671 TSC_hg19_v1_chr12_+_62954346	-21450	+	BC042679 AB017814 AB384555 TSC_hg19_v1_chr12_+_62861012	-114846	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	-115182	+	BC136288 AK098456 NM_175895	21449	-	TSC_hg19_v1_chr12_-_63328666 NM_020700 BC157843	352944	-	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	353164	-	AK022671|MON2|23041|MON2 homolog (S. cerevisiae)##AB017814|MON2|23041|MON2 homolog (S. cerevisiae)##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)##BC136288|C12orf61|283416|chromosome 12 open reading frame 61##AK098456|C12orf61|283416|chromosome 12 open reading frame 61##NM_175895|C12orf61|283416|chromosome 12 open reading frame 61##NM_020700|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC157843|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H	0.512308	CTCF.p2:-12:0.512
chr14	95155949	95156083	reg1008057.p1	11.385	+	NM_001085 TSC_hg19_v1_chr14_+_95078727 AK123091 AK308565 BC070265 BC003559 AB209060 BC010530 BC034554 AY513275 AY513276	-77280	+	TSC_hg19_v1_chr14_+_95047798 AK293192 BC008915 AK096131	-108210	+	TSC_hg19_v1_chr14_+_95047766 AK298279	-108253	+	AB463695 BC063580 AY177407 NM_173849	80408	-	AB590557 HM595745 NM_001195573	443800	-	AB028449 NM_030621	452038	-	NM_001085|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AK123091|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC070265|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC003559|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AB209060|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC010530|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC034554|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AY513275|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AY513276|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AK293192|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##BC008915|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##AK096131|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##AK298279|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##BC063580|GSC|145258|goosecoid homeobox##AY177407|GSC|145258|goosecoid homeobox##NM_173849|GSC|145258|goosecoid homeobox##HM595745|DICER1|23405|dicer 1, ribonuclease type III##NM_001195573|DICER1|23405|dicer 1, ribonuclease type III##AB028449|DICER1|23405|dicer 1, ribonuclease type III##NM_030621|DICER1|23405|dicer 1, ribonuclease type III	0.441379	CTCF.p2:-4:0.441
chr11	121526821	121526936	reg1008381.p2	11.384	+	TSC_hg19_v1_chr11_+_121461071 AK294404	-65780	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-203703	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	-203929	+	BC130361 BC130363 AF303179 NM_001001786	459983	-	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	999669	+	BC070266 AK313578 AF001622 NM_019604	1182351	+	AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule	0.61473	CTCF.p2:-5:0.573
chr14	68133986	68134102	reg1008551.p1	11.384	+	U75667 AK312484 TSC_hg19_v1_chr14_+_68086666 D86724 BC001350 U82256 AB587380 CR536550	-47370	+	AY074489 BC008464 TSC_hg19_v1_chr14_+_68086636	-47408	+	TSC_hg19_v1_chr14_+_68086582 BC029050 NM_001172	-47455	+	BT019348 BT019960 CR456757 CR542095 CU678400 AF035824 TSC_hg19_v1_chr14_-_68141319 AK310839	7221	-	TSC_hg19_v1_chr14_-_68141331 AK291689 AK316572 BC003142 BC001598 AF060902 NM_006370	7420	-	CR457180 CU680026 CU691474 CU693194 BC011727 BC000112 TSC_hg19_v1_chr14_-_68162477 AK289427 BC026274 DQ426886 AK057195 AK293355 BC051291 AF151840 AF167438 AF395068 AK307500 AK314465 BC037302 AK074749 NM_001252650 NM_016026	28420	-	U75667|ARG2|384|arginase, type II##AK312484|ARG2|384|arginase, type II##D86724|ARG2|384|arginase, type II##BC001350|ARG2|384|arginase, type II##U82256|ARG2|384|arginase, type II##CR536550|ARG2|384|arginase, type II##AY074489|ARG2|384|arginase, type II##BC008464|ARG2|384|arginase, type II##BC029050|ARG2|384|arginase, type II##NM_001172|ARG2|384|arginase, type II##BT019348|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##BT019960|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##CR456757|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##CR542095|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##AF035824|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##AK310839|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##AK291689|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##AK316572|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##BC003142|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##AF060902|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##NM_006370|VTI1B|10490|vesicle transport through interaction with t-SNAREs homolog 1B (yeast)##CR457180|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##BC011727|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##BC000112|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK289427|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##BC026274|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##DQ426886|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK057195|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK293355|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##BC051291|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AF151840|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AF167438|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AF395068|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK307500|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK314465|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##BC037302|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##AK074749|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##NM_001252650|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)##NM_016026|RDH11|51109|retinol dehydrogenase 11 (all-trans/9-cis/11-cis)	0.0	
chr2	3427779	3427904	reg1008864.p1	11.384	+	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	-44336	+	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	-46285	-	TSC_hg19_v1_chr2_-_2335085 AK307797	-1092757	-	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	95457	-	TSC_hg19_v1_chr2_-_3523345 NM_018269	95510	-	AJ224117 BT019670 CR541820 DQ892597 DQ895824 TSC_hg19_v1_chr2_-_3605880 AF048994 AK096913 AF048995 AK075490	178038	-	AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK307797|MYT1L|23040|myelin transcription factor 1-like##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1##NM_018269|ADI1|55256|acireductone dioxygenase 1##AJ224117|RNASEH1|246243|ribonuclease H1##BT019670|RNASEH1|246243|ribonuclease H1##CR541820|RNASEH1|246243|ribonuclease H1##DQ892597|RNASEH1|246243|ribonuclease H1##DQ895824|RNASEH1|246243|ribonuclease H1##AF048994|RNASEH1|246243|ribonuclease H1##AK096913|RNASEH1|246243|ribonuclease H1##AF048995|RNASEH1|246243|ribonuclease H1##AK075490|RNASEH1|246243|ribonuclease H1	0.869659	CTCF.p2:13:0.870
chr1	174952454	174952611	reg1010278.p1	11.383	+	AK316355 NM_001243764 AK316219 AK298711	-18611	+	NM_001035230 BC012094	-107863	+	NM_001243763 AL049701	-108973	+	NM_001007214 AK093425 AX748118	16051	+	TSC_hg19_v1_chr1_+_174968845 NM_014412	16335	+	TSC_hg19_v1_chr1_+_174969090 BC005975	16549	+	AK316355|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243764|RABGAP1L|9910|RAB GTPase activating protein 1-like##AK316219|RABGAP1L|9910|RAB GTPase activating protein 1-like##AK298711|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001035230|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC012094|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243763|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL049701|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001007214|CACYBP|27101|calcyclin binding protein##AK093425|CACYBP|27101|calcyclin binding protein##NM_014412|CACYBP|27101|calcyclin binding protein##BC005975|CACYBP|27101|calcyclin binding protein	0.99992	CTCF.p2:18:1.000
chr8	79837103	79837247	reg1010007.p1	11.383	+	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	-119527	-	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	-258855	+	NM_006823 NM_181839 S76965	-408840	+	NM_001199214 NM_007029	685873	+	TSC_hg19_v1_chr8_+_80523304 D50375	686133	+	AK299500 TSC_hg19_v1_chr8_+_80523339	686164	+	J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7##NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_001199214|STMN2|11075|stathmin-like 2##NM_007029|STMN2|11075|stathmin-like 2##D50375|STMN2|11075|stathmin-like 2##AK299500|STMN2|11075|stathmin-like 2	0.994491	CTCF.p2:1:0.994
chr11	46336786	46336929	reg1009902.p1	11.382	+	TSC_hg19_v1_chr11_+_46299596 AB463458 CU680776 DQ895809 EU176365	-37234	+	BC014097 TSC_hg19_v1_chr11_+_46299557 BC015781 AB063321	-37297	+	TSC_hg19_v1_chr11_+_46299212 AK314072 NM_052854	-37652	+	AK124594 NM_201532	17597	+	NM_201533 TSC_hg19_v1_chr11_+_46366981 AK303322	30041	+	TSC_hg19_v1_chr11_+_46366983 AK123378 BX648433	30127	+	DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AK124594|DGKZ|8525|diacylglycerol kinase, zeta##NM_201532|DGKZ|8525|diacylglycerol kinase, zeta##NM_201533|DGKZ|8525|diacylglycerol kinase, zeta##AK303322|DGKZ|8525|diacylglycerol kinase, zeta##AK123378|DGKZ|8525|diacylglycerol kinase, zeta##BX648433|DGKZ|8525|diacylglycerol kinase, zeta	0.891588	CTCF.p2:8:0.892
chr13	52810475	52810601	reg1010150.p1	11.382	+	TSC_hg19_v1_chr13_-_52768573 AK307345 AK307124 AK309380 BX648914 AK027536	-41979	-	NM_001146099 NM_002498	-76543	-	NM_152720 TSC_hg19_v1_chr13_-_52733672 BC019916 AK290259	-76812	-	AB044385 TSC_hg19_v1_chr13_-_52980275 BC063842 AK298974 AK315087 AY358149	169740	-	AK096289 NM_018676 NM_199263	170090	-	TSC_hg19_v1_chr13_-_53024744 AF151903 BC050439 BC037279 AK289740 NM_016075	214229	-	AK307345|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK307124|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK309380|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##BX648914|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK027536|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##AB044385|THSD1|55901|thrombospondin, type I, domain containing 1##BC063842|THSD1|55901|thrombospondin, type I, domain containing 1##AK298974|THSD1|55901|thrombospondin, type I, domain containing 1##AK315087|THSD1|55901|thrombospondin, type I, domain containing 1##AY358149|THSD1|55901|thrombospondin, type I, domain containing 1##AK096289|THSD1|55901|thrombospondin, type I, domain containing 1##NM_018676|THSD1|55901|thrombospondin, type I, domain containing 1##NM_199263|THSD1|55901|thrombospondin, type I, domain containing 1##AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	0.996435	CTCF.p2:8:0.996
chr3	99787746	99787851	reg1008313.p1	11.382	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	-192807	-	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	-251053	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	-430348	+	BC017987 NM_001042459 NM_182909 AF329092 AX776292	45554	-	AK300704 NM_001167924	45975	+	TSC_hg19_v1_chr3_+_99898312 AK055026	110563	+	EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like##AK300704|C3orf26|84319|chromosome 3 open reading frame 26##NM_001167924|C3orf26|84319|chromosome 3 open reading frame 26	0.999006	CTCF.p2:-9:0.999
chr10	115281077	115281201	reg1009654.p1	11.381	+	TSC_hg19_v1_chr10_+_114710785 FJ010164 FJ010165 FJ010173	-570306	+	TSC_hg19_v1_chr10_+_114710005 AK225809 NM_001146274 NM_001146283 NM_001146284 NM_001146285 NM_001146286 NM_001198525 NM_001198526 NM_001198527 NM_001198528 NM_001198529 NM_001198530 NM_001198531 NM_030756 FJ010174 Y11306 AK315243 FJ010168 FJ010169 FJ010172 FJ010166 FJ010167 FJ010170 BC032656 FJ010171 AK299295 AB440195 AB451266 CR536574 HM352838 HM352839 HM352840 HM352841 HM352842 HM352843 HM352844 HM352845 HM352846 HM352847 HM352848 HM352849 HM352850 HM352851 BX648364	-570837	+	TSC_hg19_v1_chr10_-_114207307 AK308026	-1073834	-	AK303948 NM_001177660	29450	+	NM_004132 D49742 S83182 BC031412 AK290832 AK303761 AK303759 AB590433 CU689160 DQ890820 DQ893975	31689	+	AM392642 AM393530 BC126407 BC143751 AL831980 AL832025 AL832330 BX640682 AY177620 AY177621 BX641052 BC005933 BC017866 BC058825 BC070130 AK056969 AY081943 NM_006175 NM_198060	142583	-	FJ010164|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010165|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010173|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK308026|ZDHHC6|64429|zinc finger, DHHC-type containing 6##AK303948|HABP2|3026|hyaluronan binding protein 2##NM_001177660|HABP2|3026|hyaluronan binding protein 2##NM_004132|HABP2|3026|hyaluronan binding protein 2##D49742|HABP2|3026|hyaluronan binding protein 2##S83182|HABP2|3026|hyaluronan binding protein 2##BC031412|HABP2|3026|hyaluronan binding protein 2##AK290832|HABP2|3026|hyaluronan binding protein 2##AK303761|HABP2|3026|hyaluronan binding protein 2##AK303759|HABP2|3026|hyaluronan binding protein 2##DQ890820|HABP2|3026|hyaluronan binding protein 2##DQ893975|HABP2|3026|hyaluronan binding protein 2##AM392642|NRAP|4892|nebulin-related anchoring protein##AM393530|NRAP|4892|nebulin-related anchoring protein##BC126407|NRAP|4892|nebulin-related anchoring protein##BC143751|NRAP|4892|nebulin-related anchoring protein##AL831980|NRAP|4892|nebulin-related anchoring protein##AL832025|NRAP|4892|nebulin-related anchoring protein##AL832330|NRAP|4892|nebulin-related anchoring protein##BX640682|NRAP|4892|nebulin-related anchoring protein##AY177620|NRAP|4892|nebulin-related anchoring protein##AY177621|NRAP|4892|nebulin-related anchoring protein##BX641052|NRAP|4892|nebulin-related anchoring protein##BC005933|NRAP|4892|nebulin-related anchoring protein##BC017866|NRAP|4892|nebulin-related anchoring protein##BC058825|NRAP|4892|nebulin-related anchoring protein##BC070130|NRAP|4892|nebulin-related anchoring protein##AK056969|NRAP|4892|nebulin-related anchoring protein##AY081943|NRAP|4892|nebulin-related anchoring protein##NM_006175|NRAP|4892|nebulin-related anchoring protein##NM_198060|NRAP|4892|nebulin-related anchoring protein	0.94621	CTCF.p2:5:0.946
chr6	90680498	90680619	reg1009789.p1	11.381	+	AB527151 AF296766 NM_032602	-76372	+	BC012574 TSC_hg19_v1_chr6_+_90539629 BC027850 AF154415 BC029386 BC132828 BC132830	-140859	+	TSC_hg19_v1_chr6_+_90539598 BC056685 NM_001137667 NM_001137668 NM_012115	-140964	+	AJ271878 TSC_hg19_v1_chr6_-_91006556 NM_021813	325953	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	326054	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	616125	-	AF296766|GJA10|84694|gap junction protein, alpha 10, 62kDa##NM_032602|GJA10|84694|gap junction protein, alpha 10, 62kDa##BC012574|CASP8AP2|9994|caspase 8 associated protein 2##BC027850|CASP8AP2|9994|caspase 8 associated protein 2##AF154415|CASP8AP2|9994|caspase 8 associated protein 2##BC029386|CASP8AP2|9994|caspase 8 associated protein 2##BC132828|CASP8AP2|9994|caspase 8 associated protein 2##BC132830|CASP8AP2|9994|caspase 8 associated protein 2##BC056685|CASP8AP2|9994|caspase 8 associated protein 2##NM_001137667|CASP8AP2|9994|caspase 8 associated protein 2##NM_001137668|CASP8AP2|9994|caspase 8 associated protein 2##NM_012115|CASP8AP2|9994|caspase 8 associated protein 2##AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7	0.297394	CTCF.p2:-12:0.297
chr1	40550493	40550608	reg1008408.p2	11.380	+	TSC_hg19_v1_chr1_+_40506457 L12168	-44092	+	TSC_hg19_v1_chr1_+_40506444 BC013963	-44109	+	AK295396 AK298110 TSC_hg19_v1_chr1_+_40506430 M98474 AK298094	-44122	+	CR542053 CU678959 AK301682 TSC_hg19_v1_chr1_-_40562915 AK075496 AK312287 U44772	12362	-	TSC_hg19_v1_chr1_-_40562918 BC008426	12369	-	AK302232 AK310799 TSC_hg19_v1_chr1_-_40562925	12377	-	L12168|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##BC013963|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK295396|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK298110|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##M98474|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK298094|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##CR542053|PPT1|5538|palmitoyl-protein thioesterase 1##AK301682|PPT1|5538|palmitoyl-protein thioesterase 1##AK075496|PPT1|5538|palmitoyl-protein thioesterase 1##AK312287|PPT1|5538|palmitoyl-protein thioesterase 1##U44772|PPT1|5538|palmitoyl-protein thioesterase 1##BC008426|PPT1|5538|palmitoyl-protein thioesterase 1##AK302232|PPT1|5538|palmitoyl-protein thioesterase 1##AK310799|PPT1|5538|palmitoyl-protein thioesterase 1	0.694154	CTCF.p2:-1:0.694
chr19	10535073	10535244	reg1009045.p1	11.380	+	TSC_hg19_v1_chr19_+_10531189 L20965 NM_001111307	-3928	+	AY593872 NM_001243121 TSC_hg19_v1_chr19_+_10527555	-7655	+	TSC_hg19_v1_chr19_-_10514250 NM_007065	-20902	-	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	6269	+	AF073745 NM_001111309	7952	+	TSC_hg19_v1_chr19_+_10563605 BC038234 NM_006202 BC019864	28510	+	L20965|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111307|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY593872|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001243121|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_007065|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AF073745|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111309|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC038234|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_006202|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC019864|PDE4A|5141|phosphodiesterase 4A, cAMP-specific	0.995709	CTCF.p2:2:0.996
chr21	46352683	46352788	reg1008953.p1	11.380	+	TSC_hg19_v1_chr21_-_46348634 AK095992 NM_001127491	-4043	-	AB208909 TSC_hg19_v1_chr21_-_46340890 NM_000211	-11816	-	AK222505 TSC_hg19_v1_chr21_-_46340824	-11904	-	BC128244 BC128245 AF380178 AY040088 TSC_hg19_v1_chr21_-_46359834 AK127059	7028	-	TSC_hg19_v1_chr21_+_46359920 AF391113 AF391114 BC009341 NM_058190	7190	+	TSC_hg19_v1_chr21_+_46359968 CU679303	7234	+	AK095992|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##NM_001127491|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AB208909|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##NM_000211|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK222505|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##BC128244|C21orf67|84536|chromosome 21 open reading frame 67##BC128245|C21orf67|84536|chromosome 21 open reading frame 67##AF380178|C21orf67|84536|chromosome 21 open reading frame 67##AY040088|C21orf67|84536|chromosome 21 open reading frame 67##AF391113|FAM207A|85395|family with sequence similarity 207, member A##AF391114|FAM207A|85395|family with sequence similarity 207, member A##BC009341|FAM207A|85395|family with sequence similarity 207, member A##NM_058190|FAM207A|85395|family with sequence similarity 207, member A	0.197099	
chr9	99079751	99079884	reg1008807.p1	11.380	+	BT019371 CR541894 CU689848 DQ891812 DQ894995 BC034281 NM_000197 U05659	-15408	-	TSC_hg19_v1_chr9_-_98638262 AF194971 AL389954	-441494	-	NM_001010895 TSC_hg19_v1_chr9_+_98637942 AK129624 AK308409 AL389953	-441876	+	TSC_hg19_v1_chr9_-_99145966 HQ258608 AB106537 AB122077 AK307890 BC100278	66114	-	NM_007001 TSC_hg19_v1_chr9_-_99145994 BC113579	66203	-	BC126141 TSC_hg19_v1_chr9_-_99180642	100779	-	BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##AF194971|LINC00476|100128782|long intergenic non-protein coding RNA 476##AL389954|LINC00476|100128782|long intergenic non-protein coding RNA 476##NM_001010895|C9orf102|375748|chromosome 9 open reading frame 102##AK308409|C9orf102|375748|chromosome 9 open reading frame 102##AL389953|C9orf102|375748|chromosome 9 open reading frame 102##HQ258608|SLC35D2|11046|solute carrier family 35, member D2##AB106537|SLC35D2|11046|solute carrier family 35, member D2##AB122077|SLC35D2|11046|solute carrier family 35, member D2##AK307890|SLC35D2|11046|solute carrier family 35, member D2##BC100278|SLC35D2|11046|solute carrier family 35, member D2##NM_007001|SLC35D2|11046|solute carrier family 35, member D2##BC113579|SLC35D2|11046|solute carrier family 35, member D2##BC126141|ZNF367|195828|zinc finger protein 367	0.999898	CTCF.p2:9:1.000
chr1	161711349	161711491	reg1010462.p1	11.379	+	AY670683 AY670684 AY670685 AY670686 AY670687 NM_001002901 AY786314	-18965	+	AF531423 NM_001184866 NM_001184867 NM_001184870 NM_001184871 NM_001184872 NM_001184873 NM_032738	-34659	+	NM_001002273 NM_001002274 NM_001002275 NM_001190828 NM_004001 AF543826 M31933 X17653 AK308150 AB209585 BC062629 X52473 X62573 BC146678 M28696 M31934 BC031992 BC141826 U90941 AB590317 BC148273 CR407635 CU689254 DQ891344 DQ894525 U87560 U87561 U87562 U87563 U87564 U87565 U87566 U87567 U87568 U87569 U87570 U87571 U87572 U87573 U87574 U87575 U87576 U87577 M31935	-78428	+	TSC_hg19_v1_chr1_+_161719575 BC006286 AF119226 NM_007240 DQ892766 DQ896011 CU675333 BT006633	8146	+	NM_007348 TSC_hg19_v1_chr1_+_161736080 AB015856	24650	+	AF005887 AK290498 TSC_hg19_v1_chr1_+_161736109	24690	+	AY670683|FCRLB|127943|Fc receptor-like B##AY670684|FCRLB|127943|Fc receptor-like B##AY670685|FCRLB|127943|Fc receptor-like B##AY670686|FCRLB|127943|Fc receptor-like B##AY670687|FCRLB|127943|Fc receptor-like B##NM_001002901|FCRLB|127943|Fc receptor-like B##AY786314|FCRLB|127943|Fc receptor-like B##AF531423|FCRLA|84824|Fc receptor-like A##NM_001184866|FCRLA|84824|Fc receptor-like A##NM_001184867|FCRLA|84824|Fc receptor-like A##NM_001184870|FCRLA|84824|Fc receptor-like A##NM_001184871|FCRLA|84824|Fc receptor-like A##NM_001184872|FCRLA|84824|Fc receptor-like A##NM_001184873|FCRLA|84824|Fc receptor-like A##NM_032738|FCRLA|84824|Fc receptor-like A##NM_001002273|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_001002274|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_001002275|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_001190828|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_004001|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AF543826|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M31933|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##X17653|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AK308150|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AB209585|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##X52473|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##X62573|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC146678|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M28696|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M31934|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC031992|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC141826|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U90941|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC148273|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##CR407635|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##DQ891344|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##DQ894525|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87560|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87561|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87562|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87563|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87564|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87565|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87566|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87567|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87568|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87569|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87570|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87571|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87572|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87573|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87574|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87575|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87576|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87577|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M31935|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC006286|DUSP12|11266|dual specificity phosphatase 12##AF119226|DUSP12|11266|dual specificity phosphatase 12##NM_007240|DUSP12|11266|dual specificity phosphatase 12##DQ892766|DUSP12|11266|dual specificity phosphatase 12##DQ896011|DUSP12|11266|dual specificity phosphatase 12##BT006633|DUSP12|11266|dual specificity phosphatase 12##NM_007348|ATF6|22926|activating transcription factor 6##AB015856|ATF6|22926|activating transcription factor 6##AF005887|ATF6|22926|activating transcription factor 6##AK290498|ATF6|22926|activating transcription factor 6	0.997544	CTCF.p2:15:0.998
chr11	9779748	9779890	reg1008352.p2	11.379	+	TSC_hg19_v1_chr11_+_9685669 AB014540 BC000134 CU674300 AF210818 AK304104	-94113	+	BC000616 TSC_hg19_v1_chr11_+_9685651 AF134894	-94168	+	TSC_hg19_v1_chr11_+_9685627 NM_015055	-94183	+	AK098060 TSC_hg19_v1_chr11_+_9779882	43	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	535947	-	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	546810	+	AB014540|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000134|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF210818|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AK304104|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000616|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF134894|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##NM_015055|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AK098060|LOC283104|283104|uncharacterized LOC283104##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin	0.984446	CTCF.p2:-3:0.984
chr3	10385952	10386066	reg1007085.p1	11.379	+	TSC_hg19_v1_chr3_-_10362861 NM_183352	-23156	-	AK294662 TSC_hg19_v1_chr3_-_10362797 BC091506 AK301999	-23211	-	AF052155 NM_001136232 TSC_hg19_v1_chr3_-_10362765 L09260 BC002634 AK223019 EF036494	-23262	-	TSC_hg19_v1_chr3_-_10547221 M97260	161224	-	AK308898 NM_001001331 NM_001683 TSC_hg19_v1_chr3_-_10547271	161260	-	AB210008 TSC_hg19_v1_chr3_-_10547352	161337	-	NM_183352|SEC13|6396|SEC13 homolog (S. cerevisiae)##AK294662|SEC13|6396|SEC13 homolog (S. cerevisiae)##BC091506|SEC13|6396|SEC13 homolog (S. cerevisiae)##AK301999|SEC13|6396|SEC13 homolog (S. cerevisiae)##AF052155|SEC13|6396|SEC13 homolog (S. cerevisiae)##NM_001136232|SEC13|6396|SEC13 homolog (S. cerevisiae)##L09260|SEC13|6396|SEC13 homolog (S. cerevisiae)##BC002634|SEC13|6396|SEC13 homolog (S. cerevisiae)##AK223019|SEC13|6396|SEC13 homolog (S. cerevisiae)##EF036494|SEC13|6396|SEC13 homolog (S. cerevisiae)##M97260|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2	0.082207	
chr9	92681765	92681888	reg1007020.p2	11.379	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-461845	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-568819	-	BC054500 NM_001142287 NM_006378	-587216	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	723293	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	882210	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	882241	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.099606	
chr11	12910424	12910548	reg1009412.p1	11.378	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	-214523	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	-511377	+	AK123671 NM_032867	-602040	+	TSC_hg19_v1_chr11_+_12960793 AK075236	50325	+	TSC_hg19_v1_chr11_+_13030883 NM_001080521	120438	+	TSC_hg19_v1_chr11_+_13299288 NM_001030272 NM_001030273 NM_001178	388806	+	NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha##AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_001080521|RASSF10|644943|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10##NM_001030272|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001030273|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001178|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like	0.989518	CTCF.p2:14:0.990
chr3	128513997	128514137	reg1009600.p1	11.378	+	TSC_hg19_v1_chr3_+_128445036 AK298344	-69030	+	TSC_hg19_v1_chr3_+_128445035 AK000826 AK308934 BC008721	-69033	+	TSC_hg19_v1_chr3_+_128445026 AK290721	-69039	+	TSC_hg19_v1_chr3_+_128532268 AF119891	18268	+	NM_014049 TSC_hg19_v1_chr3_+_128598429	84314	+	TSC_hg19_v1_chr3_+_128598453 BC007970	84381	+	AK298344|RAB7A|7879|RAB7A, member RAS oncogene family##AK000826|RAB7A|7879|RAB7A, member RAS oncogene family##AK308934|RAB7A|7879|RAB7A, member RAS oncogene family##BC008721|RAB7A|7879|RAB7A, member RAS oncogene family##AK290721|RAB7A|7879|RAB7A, member RAS oncogene family##NM_014049|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##BC007970|ACAD9|28976|acyl-CoA dehydrogenase family, member 9	0.999438	CTCF.p2:0:0.999
chr22	30682920	30683053	reg1000562.p1	11.377	+	CR541703 AB463155 CU013134 CU013422 DQ892537 DQ895748 CR456534 BC011589 NM_020530 TSC_hg19_v1_chr22_-_30662841	-20171	-	AB527710 X13967 BC093733 BC093735 BC143305 BC069540 TSC_hg19_v1_chr22_-_30642749 AK315310 NM_002309	-40247	-	BC030013 NM_152510	-206534	+	CU013000 CU013288 CU692418 AB528172 BC021927 AK309436 AK055587 TSC_hg19_v1_chr22_-_30685566 CR456449 AK310246 NM_001037666	2564	-	TSC_hg19_v1_chr22_-_30722928 AB449894 AB590468 BC143051 BC143052 BC150187 CT841514 BC150214 AK127939 AF331038 BC022201 BC136815 BC171775 AK074656 BC142940 NM_001204240 NM_031937	39941	-	TSC_hg19_v1_chr22_+_30752612 BC018040 NM_001017437	69633	+	CR541703|OSM|5008|oncostatin M##CU013134|OSM|5008|oncostatin M##CU013422|OSM|5008|oncostatin M##DQ892537|OSM|5008|oncostatin M##DQ895748|OSM|5008|oncostatin M##CR456534|OSM|5008|oncostatin M##BC011589|OSM|5008|oncostatin M##NM_020530|OSM|5008|oncostatin M##X13967|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093733|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093735|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC143305|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC069540|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AK315310|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##NM_002309|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC030013|HORMAD2|150280|HORMA domain containing 2##NM_152510|HORMAD2|150280|HORMA domain containing 2##CU013000|GATSL3|652968|GATS protein-like 3##CU013288|GATSL3|652968|GATS protein-like 3##BC021927|GATSL3|652968|GATS protein-like 3##AK309436|GATSL3|652968|GATS protein-like 3##AK055587|GATSL3|652968|GATS protein-like 3##CR456449|GATSL3|652968|GATS protein-like 3##AK310246|GATSL3|652968|GATS protein-like 3##NM_001037666|GATSL3|652968|GATS protein-like 3##AB449894|TBC1D10A|83874|TBC1 domain family, member 10A##BC143051|TBC1D10A|83874|TBC1 domain family, member 10A##BC143052|TBC1D10A|83874|TBC1 domain family, member 10A##BC150187|TBC1D10A|83874|TBC1 domain family, member 10A##CT841514|TBC1D10A|83874|TBC1 domain family, member 10A##BC150214|TBC1D10A|83874|TBC1 domain family, member 10A##AK127939|TBC1D10A|83874|TBC1 domain family, member 10A##AF331038|TBC1D10A|83874|TBC1 domain family, member 10A##BC022201|TBC1D10A|83874|TBC1 domain family, member 10A##BC136815|TBC1D10A|83874|TBC1 domain family, member 10A##BC171775|TBC1D10A|83874|TBC1 domain family, member 10A##AK074656|TBC1D10A|83874|TBC1 domain family, member 10A##BC142940|TBC1D10A|83874|TBC1 domain family, member 10A##NM_001204240|TBC1D10A|83874|TBC1 domain family, member 10A##NM_031937|TBC1D10A|83874|TBC1 domain family, member 10A##BC018040|CCDC157|550631|coiled-coil domain containing 157##NM_001017437|CCDC157|550631|coiled-coil domain containing 157	0.999723	CTCF.p2:3:1.000
chr6	128058207	128058325	reg1008375.p2	11.377	+	AK303850 BC062712 NM_001010905	-159948	+	NM_001012279	-217767	-	NM_014702	-277732	-	AK292046 AK097903 BC144034 BC130516 NM_001010923 NM_001164685	163934	-	AK124031 NM_001164687	181492	-	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	783390	-	AK303850|C6orf58|352999|chromosome 6 open reading frame 58##BC062712|C6orf58|352999|chromosome 6 open reading frame 58##NM_001010905|C6orf58|352999|chromosome 6 open reading frame 58##NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174##NM_014702|KIAA0408|9729|KIAA0408##AK292046|THEMIS|387357|thymocyte selection associated##AK097903|THEMIS|387357|thymocyte selection associated##BC144034|THEMIS|387357|thymocyte selection associated##BC130516|THEMIS|387357|thymocyte selection associated##NM_001010923|THEMIS|387357|thymocyte selection associated##NM_001164685|THEMIS|387357|thymocyte selection associated##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	0.999004	CTCF.p2:-2:0.999
chr6	4936936	4937061	reg1007851.p2	11.377	+	BC043397 NM_001143971	-46773	+	AK296985 NM_001143970	-100667	+	TSC_hg19_v1_chr6_+_4776889 BC119682	-160077	+	TSC_hg19_v1_chr6_+_5004043 AK094934	67028	+	TSC_hg19_v1_chr6_-_5004262 BC017871 NM_006638	67272	-	TSC_hg19_v1_chr6_+_5030223 BC042032 BC133670	93235	+	BC043397|CDYL|9425|chromodomain protein, Y-like##NM_001143971|CDYL|9425|chromodomain protein, Y-like##AK296985|CDYL|9425|chromodomain protein, Y-like##NM_001143970|CDYL|9425|chromodomain protein, Y-like##BC119682|CDYL|9425|chromodomain protein, Y-like##AK094934|LOC285778|285778|uncharacterized LOC285778##BC017871|RPP40|10799|ribonuclease P/MRP 40kDa subunit##NM_006638|RPP40|10799|ribonuclease P/MRP 40kDa subunit##BC042032|LOC100129461|100129461|uncharacterized LOC100129461##BC133670|LOC100129461|100129461|uncharacterized LOC100129461	0.925917	CTCF.p2:5:0.926
chr1	178737594	178737724	reg1010390.p1	11.376	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	-43286	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-255393	+	AF047711 NM_004841 AK290308	-427025	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	102487	-	TSC_hg19_v1_chr1_+_178995028 AB007944	257361	+	TSC_hg19_v1_chr1_+_178995055 AB480690 BC051794 NM_014864	257405	+	BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##AB007944|FAM20B|9917|family with sequence similarity 20, member B##AB480690|FAM20B|9917|family with sequence similarity 20, member B##BC051794|FAM20B|9917|family with sequence similarity 20, member B##NM_014864|FAM20B|9917|family with sequence similarity 20, member B	0.98489	CTCF.p2:-4:0.985
chr19	46061722	46061875	reg1007141.p1	11.376	+	TSC_hg19_v1_chr19_+_46010748 BC026019 BC038224 Z46389	-51025	+	TSC_hg19_v1_chr19_+_46010736 AK314812	-51075	+	TSC_hg19_v1_chr19_+_46010688 NM_003370	-51110	+	AB528200 AM392686 EU832556 TSC_hg19_v1_chr19_-_46088061 BC064146 BC005059 BC047316	26244	-	TSC_hg19_v1_chr19_-_46088075 AK025840	26280	-	TSC_hg19_v1_chr19_-_46088084 AK098798 NM_001017989 NM_025136	26306	-	BC026019|VASP|7408|vasodilator-stimulated phosphoprotein##BC038224|VASP|7408|vasodilator-stimulated phosphoprotein##Z46389|VASP|7408|vasodilator-stimulated phosphoprotein##AK314812|VASP|7408|vasodilator-stimulated phosphoprotein##NM_003370|VASP|7408|vasodilator-stimulated phosphoprotein##AM392686|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##EU832556|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC064146|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC005059|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC047316|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##AK025840|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##AK098798|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##NM_001017989|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##NM_025136|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)	1.143434	CTCF.p2:-23:0.992
chr12	131303631	131303755	reg1008169.p2	11.375	+	TSC_hg19_v1_chr12_-_131200818 BC007632	-102868	-	AB002316 NM_015347	-301284	-	TSC_hg19_v1_chr12_+_130822635 BC028581 AF387507 AF104260 AK093133 AX747944	-481071	+	TSC_hg19_v1_chr12_-_131323796 D14582 BC047496 NM_001980 NM_194356	20060	-	TSC_hg19_v1_chr12_+_131356615 AF054183 AK311223 AK316193 AK312466 BC000852 NM_006325	52893	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	52932	+	BC007632|RIMBP2|23504|RIMS binding protein 2##AB002316|RIMBP2|23504|RIMS binding protein 2##NM_015347|RIMBP2|23504|RIMS binding protein 2##BC028581|PIWIL1|9271|piwi-like 1 (Drosophila)##AF387507|PIWIL1|9271|piwi-like 1 (Drosophila)##AF104260|PIWIL1|9271|piwi-like 1 (Drosophila)##AK093133|PIWIL1|9271|piwi-like 1 (Drosophila)##D14582|STX2|2054|syntaxin 2##BC047496|STX2|2054|syntaxin 2##NM_001980|STX2|2054|syntaxin 2##NM_194356|STX2|2054|syntaxin 2##AF054183|RAN|5901|RAN, member RAS oncogene family##AK316193|RAN|5901|RAN, member RAS oncogene family##AK312466|RAN|5901|RAN, member RAS oncogene family##BC000852|RAN|5901|RAN, member RAS oncogene family##NM_006325|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family	1.025185	CTCF.p2:3:0.999
chr15	99813315	99813409	reg1007013.p2	11.374	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-21720	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-21946	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-23656	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	292791	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	292832	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	292873	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.737902	CTCF.p2:-3:0.738
chr2	233918770	233918895	reg1009683.p1	11.374	+	BC069151 BC107053 NM_005383	-21451	+	TSC_hg19_v1_chr2_-_233877933 BC031573 NM_019850 AK025225 AK300953	-40882	-	TSC_hg19_v1_chr2_-_233877913 AK298315	-40925	-	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	6227	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	6284	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	241434	+	BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC031573|NGEF|25791|neuronal guanine nucleotide exchange factor##NM_019850|NGEF|25791|neuronal guanine nucleotide exchange factor##AK300953|NGEF|25791|neuronal guanine nucleotide exchange factor##AK298315|NGEF|25791|neuronal guanine nucleotide exchange factor##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.99982	CTCF.p2:7:1.000
chrX	11155770	11155923	reg1007824.p1	11.374	+	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	-26377	+	NM_001122608 NM_001171991 NM_005333 AK097815 TSC_hg19_v1_chrX_+_11129447 CR749578	-26416	+	NM_033290	-304038	-	AF177663 NM_013423 AK297713	128262	-	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	155696	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	527974	-	BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase##NM_001122608|HCCS|3052|holocytochrome c synthase##NM_001171991|HCCS|3052|holocytochrome c synthase##NM_005333|HCCS|3052|holocytochrome c synthase##AK097815|HCCS|3052|holocytochrome c synthase##CR749578|HCCS|3052|holocytochrome c synthase##NM_033290|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6	0.999144	CTCF.p2:3:0.999
chr17	28134925	28135034	reg1007678.p2	11.373	+	TSC_hg19_v1_chr17_-_28088446 BC011636	-46521	-	BC028205 TSC_hg19_v1_chr17_-_27949878 AL833952	-185128	-	AK096431 NM_032854	-186587	-	AK302745 AK303060 NM_001145053 AK299608	121917	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	122154	-	NM_198529 BX648689 BC137519	133725	+	BC011636|SSH2|85464|slingshot homolog 2 (Drosophila)##BC028205|CORO6|84940|coronin 6##AL833952|CORO6|84940|coronin 6##AK096431|CORO6|84940|coronin 6##NM_032854|CORO6|84940|coronin 6##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5	0.99201	CTCF.p2:-12:0.992
chr5	32093442	32093574	reg1007589.p2	11.373	+	NM_178140	-294478	+	TSC_hg19_v1_chr5_+_31639424 AB002298	-454038	+	NM_018356 TSC_hg19_v1_chr5_+_31532398 BC032845 AK299156 AK002055 BC021215 AB527598	-561073	+	TSC_hg19_v1_chr5_+_32173523 AK055939	80008	+	TSC_hg19_v1_chr5_-_32174291 AJ296152	80760	-	TSC_hg19_v1_chr5_-_32174327 BC063586	80832	-	NM_178140|PDZD2|23037|PDZ domain containing 2##AB002298|PDZD2|23037|PDZ domain containing 2##NM_018356|C5orf22|55322|chromosome 5 open reading frame 22##BC032845|C5orf22|55322|chromosome 5 open reading frame 22##AK299156|C5orf22|55322|chromosome 5 open reading frame 22##AK002055|C5orf22|55322|chromosome 5 open reading frame 22##BC021215|C5orf22|55322|chromosome 5 open reading frame 22##AK055939|LOC153546|153546|uncharacterized LOC153546##AJ296152|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##BC063586|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)	0.953648	CTCF.p2:2:0.954
chr8	138859399	138859529	reg1010496.p1	11.373	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-2389263	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-2389806	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-3134190	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	649642	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	1066780	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	1855818	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.056109	
chr16	1351014	1351134	reg1009442.p1	11.372	+	NM_012217 BC069143	-44798	+	NM_003294 BC074974 BC074975 BC029356	-60383	+	BC065923 AK308208 BC029356 NM_024164 BC074974	-70896	-	NM_194260 NM_194261	8079	+	TSC_hg19_v1_chr16_+_1359631 NM_003345 NM_194259	8554	+	AK291118 TSC_hg19_v1_chr16_+_1359639	8568	+	NM_012217|TPSD1|23430|tryptase delta 1##BC069143|TPSD1|23430|tryptase delta 1##NM_003294|TPSAB1|7177|tryptase alpha/beta 1##BC074974|TPSAB1|7177|tryptase alpha/beta 1##BC074975|TPSAB1|7177|tryptase alpha/beta 1##BC029356|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##BC065923|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##AK308208|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##BC029356|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##NM_024164|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##BC074974|TPSAB1|7177|tryptase alpha/beta 1##NM_194260|UBE2I|7329|ubiquitin-conjugating enzyme E2I##NM_194261|UBE2I|7329|ubiquitin-conjugating enzyme E2I##NM_003345|UBE2I|7329|ubiquitin-conjugating enzyme E2I##NM_194259|UBE2I|7329|ubiquitin-conjugating enzyme E2I##AK291118|UBE2I|7329|ubiquitin-conjugating enzyme E2I	1.013907	CTCF.p2:0:1.000
chr7	98050431	98050572	reg1010379.p1	11.372	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-20068	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-20207	-	TSC_hg19_v1_chr7_-_98015920 D28374	-34587	-	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	196235	+	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	417029	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	417126	-	NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##D28374|RPS3A|6189|ribosomal protein S3A##NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130	0.99168	CTCF.p2:3:0.992
chr19	45303850	45303968	reg1009443.p1	11.371	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	-22753	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	-51928	+	BC144608 NM_001039213	-101489	+	TSC_hg19_v1_chr19_+_45312359 BC014065 NM_001013257 NM_005581 X83425 BC036745 X80026 BC050450 AB463427 CU690688 HE572749	8447	+	NM_001042724 NM_002856 TSC_hg19_v1_chr19_+_45349482	45533	+	TSC_hg19_v1_chr19_+_45349564 AK291330	45654	+	AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_001042724|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##NM_002856|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##AK291330|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)	1.017046	CTCF.p2:17:0.999
chr2	101958781	101958891	reg1007187.p2	11.371	+	AM392566 AB463234 TSC_hg19_v1_chr2_-_101925153 BC019355 BC032328 AK074985 AK075141 AY450390 BC045743 AK129799 NM_173647	-33694	-	TSC_hg19_v1_chr2_+_101869378 AF103798 BC064421 BC018664	-89444	+	TSC_hg19_v1_chr2_+_101869347 NM_017546	-89499	+	TSC_hg19_v1_chr2_-_102003859 AK094970	45027	-	TSC_hg19_v1_chr2_-_102003966 BC032949 BC047514 NM_153836 AB046109	45153	-	AK131289 AK298610 NM_001145664 TSC_hg19_v1_chr2_-_102091212	132357	-	AM392566|RNF149|284996|ring finger protein 149##BC019355|RNF149|284996|ring finger protein 149##BC032328|RNF149|284996|ring finger protein 149##AK074985|RNF149|284996|ring finger protein 149##AK075141|RNF149|284996|ring finger protein 149##AY450390|RNF149|284996|ring finger protein 149##BC045743|RNF149|284996|ring finger protein 149##AK129799|RNF149|284996|ring finger protein 149##NM_173647|RNF149|284996|ring finger protein 149##AF103798|C2orf29|55571|chromosome 2 open reading frame 29##BC064421|C2orf29|55571|chromosome 2 open reading frame 29##BC018664|C2orf29|55571|chromosome 2 open reading frame 29##NM_017546|C2orf29|55571|chromosome 2 open reading frame 29##AK094970|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC032949|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC047514|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_153836|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AB046109|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AK131289|RFX8|731220|regulatory factor X, 8##AK298610|RFX8|731220|regulatory factor X, 8##NM_001145664|RFX8|731220|regulatory factor X, 8	0.996786	CTCF.p2:-4:0.997
chr22	18038285	18038373	reg1006585.p2	11.371	+	TSC_hg19_v1_chr22_-_17747522 AF277398	-290758	-	AK314321 TSC_hg19_v1_chr22_-_17700267 AK295174 AK292689	-337966	-	AF190746 NM_017424	-347551	-	TSC_hg19_v1_chr22_+_18043149 AJ428203 AY008285 NM_031481 BC031644 AK308974 AK095706 AK309110	4890	+	BT007128 CU012943 CU013231 EU831478 EU831565 AB528072 CR456385 X71491 TSC_hg19_v1_chr22_-_18111488 X76228 BC004443	73116	-	TSC_hg19_v1_chr22_-_18111509 AK312394	73177	-	AF277398|CECR3|27442|cat eye syndrome chromosome region, candidate 3 (non-protein coding)##AK314321|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK295174|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK292689|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF190746|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_017424|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AJ428203|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AY008285|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##NM_031481|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BC031644|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK308974|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK095706|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK309110|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BT007128|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU012943|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU013231|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831478|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831565|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CR456385|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X71491|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X76228|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##BC004443|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##AK312394|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1	0.181007	
chr7	25138147	25138275	reg1007902.p1	11.371	+	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	-118467	-	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-340614	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-340872	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	26666	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	26729	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	81660	-	AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31	0.988704	CTCF.p2:11:0.989
chr9	94900526	94900642	reg1007152.p1	11.371	+	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	-22920	-	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	-188195	-	TSC_hg19_v1_chr9_-_94711095 BC033697	-189456	-	TSC_hg19_v1_chr9_-_95055945 AB209234 D28473 AK293014	155354	-	U04953 TSC_hg19_v1_chr9_-_95055976 BX647236 AK308202 BX647430 NM_013417 BX537417 BX537429 BX538109 BX647071 BX648567	155391	-	TSC_hg19_v1_chr9_-_95055986 AK301272	155402	-	AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##AB209234|IARS|3376|isoleucyl-tRNA synthetase##D28473|IARS|3376|isoleucyl-tRNA synthetase##AK293014|IARS|3376|isoleucyl-tRNA synthetase##U04953|IARS|3376|isoleucyl-tRNA synthetase##BX647236|IARS|3376|isoleucyl-tRNA synthetase##AK308202|IARS|3376|isoleucyl-tRNA synthetase##BX647430|IARS|3376|isoleucyl-tRNA synthetase##NM_013417|IARS|3376|isoleucyl-tRNA synthetase##BX537417|IARS|3376|isoleucyl-tRNA synthetase##BX537429|IARS|3376|isoleucyl-tRNA synthetase##BX538109|IARS|3376|isoleucyl-tRNA synthetase##BX647071|IARS|3376|isoleucyl-tRNA synthetase##BX648567|IARS|3376|isoleucyl-tRNA synthetase##AK301272|IARS|3376|isoleucyl-tRNA synthetase	0.999779	CTCF.p2:-16:1.000
chr15	74358470	74358620	reg1004889.p2	11.370	+	TSC_hg19_v1_chr15_+_74287153 AB384942 CU674024 BT009911	-71389	+	TSC_hg19_v1_chr15_+_74287135 M79462 M79463 M79464 M80185 AB208950	-71406	+	TSC_hg19_v1_chr15_+_74287128 AK300256 AK300951	-71426	+	BC131515 AK292574 AF263742 NM_001038640	16335	-	AK092302 AX747465 AB040898 BC152429 NM_001130136	63161	+	AK309388 NM_001130137 BC028042	63447	+	BT009911|PML|5371|promyelocytic leukemia##M79462|PML|5371|promyelocytic leukemia##M79463|PML|5371|promyelocytic leukemia##M79464|PML|5371|promyelocytic leukemia##M80185|PML|5371|promyelocytic leukemia##AB208950|PML|5371|promyelocytic leukemia##AK300256|PML|5371|promyelocytic leukemia##BC131515|GOLGA6A|342096|golgin A6 family, member A##AK292574|GOLGA6A|342096|golgin A6 family, member A##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001038640|GOLGA6A|342096|golgin A6 family, member A##AK092302|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AB040898|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC152429|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130136|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130137|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC028042|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	0.919612	CTCF.p2:6:0.920
chr16	72100712	72100846	reg1010885.p1	11.370	+	NM_020995	-3655	+	NM_001126102 NM_005143 AK314700 BC107587 AK055872 BC017862 BC058031 BC070299 K01763 L29394 BC121124 BC121125 X00637 K00422	-12256	+	AK292293 TSC_hg19_v1_chr16_+_72042642 NM_001361 BC065245	-58185	+	AK308891 BC009646 TSC_hg19_v1_chr16_-_72127507 AK222889 AK000518 NM_017853	26732	-	NM_014003 TSC_hg19_v1_chr16_+_72127745 AK301074 AK291634 AK293776 AK297269 AK311169 D86977 AK309391 BC004235 BC008340 AK297791	26983	+	NM_001142317	26988	-	NM_020995|HPR|3250|haptoglobin-related protein##NM_001126102|HP|3240|haptoglobin##NM_005143|HP|3240|haptoglobin##AK314700|HP|3240|haptoglobin##BC107587|HP|3240|haptoglobin##AK055872|HP|3240|haptoglobin##BC017862|HP|3240|haptoglobin##BC058031|HP|3240|haptoglobin##BC070299|HP|3240|haptoglobin##K01763|HP|3240|haptoglobin##L29394|HP|3240|haptoglobin##BC121124|HP|3240|haptoglobin##BC121125|HP|3240|haptoglobin##X00637|HP|3240|haptoglobin##K00422|HP|3240|haptoglobin##AK292293|DHODH|1723|dihydroorotate dehydrogenase (quinone)##NM_001361|DHODH|1723|dihydroorotate dehydrogenase (quinone)##BC065245|DHODH|1723|dihydroorotate dehydrogenase (quinone)##AK308891|TXNL4B|54957|thioredoxin-like 4B##BC009646|TXNL4B|54957|thioredoxin-like 4B##AK222889|TXNL4B|54957|thioredoxin-like 4B##AK000518|TXNL4B|54957|thioredoxin-like 4B##NM_017853|TXNL4B|54957|thioredoxin-like 4B##NM_014003|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK301074|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK291634|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK293776|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK297269|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK311169|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##D86977|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK309391|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##BC004235|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##BC008340|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK297791|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##NM_001142317|TXNL4B|54957|thioredoxin-like 4B	0.974503	CTCF.p2:-13:0.975
chr9	21396243	21396365	reg1006684.p2	11.370	+	AY255838 V00548 AB590747 CR541921 JN848522 BC074936 BC074937 BC104163 BC104164 M54886 V00544 V00549 NM_000605	-10978	-	AB464595 CU686802 HQ258738 JN848523 BC093988 BC112002 BC069427 NM_006900	-28265	-	AB590746 BC069471 BC096697 BC096710 BC096730 BC098357 NM_021002	-45419	-	K01900 NM_002170 BC104828 BC104830 V00545 V00550	12836	+	NM_024013 V00538 V00537 BC112300 BC112302 BC074928 BC074929 AB464595 CU686802 HQ258738 JN848523	44175	+	AY358570 NM_176891	86007	-	AY255838|IFNA2|3440|interferon, alpha 2##V00548|IFNA2|3440|interferon, alpha 2##CR541921|IFNA2|3440|interferon, alpha 2##BC074936|IFNA2|3440|interferon, alpha 2##BC074937|IFNA2|3440|interferon, alpha 2##BC104163|IFNA2|3440|interferon, alpha 2##BC104164|IFNA2|3440|interferon, alpha 2##M54886|IFNA2|3440|interferon, alpha 2##V00544|IFNA2|3440|interferon, alpha 2##V00549|IFNA2|3440|interferon, alpha 2##NM_000605|IFNA2|3440|interferon, alpha 2##HQ258738|IFNA1|3439|interferon, alpha 1##BC093988|IFNA13|3447|interferon, alpha 13##BC112002|IFNA1|3439|interferon, alpha 1##BC069427|IFNA13|3447|interferon, alpha 13##NM_006900|IFNA13|3447|interferon, alpha 13##BC069471|IFNA6|3443|interferon, alpha 6##BC096697|IFNA6|3443|interferon, alpha 6##BC096710|IFNA6|3443|interferon, alpha 6##BC096730|IFNA6|3443|interferon, alpha 6##BC098357|IFNA6|3443|interferon, alpha 6##NM_021002|IFNA6|3443|interferon, alpha 6##K01900|IFNA8|3445|interferon, alpha 8##NM_002170|IFNA8|3445|interferon, alpha 8##BC104828|IFNA8|3445|interferon, alpha 8##BC104830|IFNA8|3445|interferon, alpha 8##V00545|IFNA8|3445|interferon, alpha 8##V00550|IFNA8|3445|interferon, alpha 8##NM_024013|IFNA1|3439|interferon, alpha 1##V00538|IFNA1|3439|interferon, alpha 1##V00537|IFNA1|3439|interferon, alpha 1##BC112300|IFNA1|3439|interferon, alpha 1##BC112302|IFNA1|3439|interferon, alpha 1##BC074928|IFNA1|3439|interferon, alpha 1##BC074929|IFNA1|3439|interferon, alpha 1##HQ258738|IFNA1|3439|interferon, alpha 1##AY358570|IFNE|338376|interferon, epsilon##NM_176891|IFNE|338376|interferon, epsilon	0.730718	CTCF.p2:5:0.731
chr10	93395289	93395396	reg1008714.p1	11.369	+	BX537399 NM_005398 TSC_hg19_v1_chr10_-_93392859	-2484	-	AF087874 Y18207 TSC_hg19_v1_chr10_-_93392829 AK299398 AK313149	-2528	-	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	-2581	-	AF438201 TSC_hg19_v1_chr10_+_93558136	162761	+	TSC_hg19_v1_chr10_+_93558164 AF305081 NM_025235	162810	+	AK314612 TSC_hg19_v1_chr10_+_93558182 AF309033	162847	+	BX537399|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##NM_005398|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AF087874|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##Y18207|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK299398|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK313149|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AF438201|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF305081|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##NM_025235|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AK314612|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF309033|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	0.984867	CTCF.p2:1:0.985
chr6	153833379	153833506	reg1008216.p1	11.367	+	AB055767 TSC_hg19_v1_chr6_-_153603892	-229551	-	BC013117 NM_012419 AF202257 TSC_hg19_v1_chr6_-_153452453	-381022	-	TSC_hg19_v1_chr6_-_153323873 AK297671 NM_001114184 NM_019041	-509545	-	DQ680044 NM_001145279 NM_001145280 EU340241 EU340242 EU340243 NM_001145281	498190	+	L29301 NM_000914 NM_001008503 NM_001008504 NM_001008505 NM_001145282 NM_001145283 NM_001145284 NM_001145285 NM_001145286 L25119 U12569 AB590577 AK309655 AK313901 AY225404 AY364230 AY036622 AY036623 AY309001 AY309005 AY309006 AY309007 AY309008 AY309009 BC074927 AY521028	527118	+	EU360599 EU362990 NM_001145287	574199	+	BC013117|RGS17|26575|regulator of G-protein signaling 17##NM_012419|RGS17|26575|regulator of G-protein signaling 17##AF202257|RGS17|26575|regulator of G-protein signaling 17##AK297671|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_001114184|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_019041|MTRF1L|54516|mitochondrial translational release factor 1-like##DQ680044|OPRM1|4988|opioid receptor, mu 1##NM_001145279|OPRM1|4988|opioid receptor, mu 1##NM_001145280|OPRM1|4988|opioid receptor, mu 1##EU340241|OPRM1|4988|opioid receptor, mu 1##EU340242|OPRM1|4988|opioid receptor, mu 1##EU340243|OPRM1|4988|opioid receptor, mu 1##NM_001145281|OPRM1|4988|opioid receptor, mu 1##L29301|OPRM1|4988|opioid receptor, mu 1##NM_000914|OPRM1|4988|opioid receptor, mu 1##NM_001008503|OPRM1|4988|opioid receptor, mu 1##NM_001008504|OPRM1|4988|opioid receptor, mu 1##NM_001008505|OPRM1|4988|opioid receptor, mu 1##NM_001145282|OPRM1|4988|opioid receptor, mu 1##NM_001145283|OPRM1|4988|opioid receptor, mu 1##NM_001145284|OPRM1|4988|opioid receptor, mu 1##NM_001145285|OPRM1|4988|opioid receptor, mu 1##NM_001145286|OPRM1|4988|opioid receptor, mu 1##L25119|OPRM1|4988|opioid receptor, mu 1##U12569|OPRM1|4988|opioid receptor, mu 1##AK313901|OPRM1|4988|opioid receptor, mu 1##AY225404|OPRM1|4988|opioid receptor, mu 1##AY364230|OPRM1|4988|opioid receptor, mu 1##AY036622|OPRM1|4988|opioid receptor, mu 1##AY036623|OPRM1|4988|opioid receptor, mu 1##AY309001|OPRM1|4988|opioid receptor, mu 1##AY309005|OPRM1|4988|opioid receptor, mu 1##AY309006|OPRM1|4988|opioid receptor, mu 1##AY309007|OPRM1|4988|opioid receptor, mu 1##AY309008|OPRM1|4988|opioid receptor, mu 1##AY309009|OPRM1|4988|opioid receptor, mu 1##BC074927|OPRM1|4988|opioid receptor, mu 1##AY521028|OPRM1|4988|opioid receptor, mu 1##EU360599|OPRM1|4988|opioid receptor, mu 1##EU362990|OPRM1|4988|opioid receptor, mu 1##NM_001145287|OPRM1|4988|opioid receptor, mu 1	0.0	
chr15	32568548	32568646	reg1006224.p1	11.366	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-245854	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-405654	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-405768	-	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	339165	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	365317	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	441660	+	AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1	0.999849	CTCF.p2:3:1.000
chr21	35720340	35720438	reg1005255.p2	11.366	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	-274460	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	-274548	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-432297	-	AF302095 DQ192290 NM_172201 BC112087 BC093892	15957	+	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	27436	+	AY789480 NM_001127670 EU008570	107683	-	AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1	0.998125	CTCF.p2:5:0.998
chr2	139585122	139585249	reg1007462.p1	11.366	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-47379	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-325695	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-325792	+	TSC_hg19_v1_chr2_-_142888540 AK054663	3303371	-	AF176832 NM_018557	3304084	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	4050021	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.990028	CTCF.p2:25:0.990
chr4	103541918	103542060	reg1008424.p2	11.366	+	TSC_hg19_v1_chr4_+_103422822 AK291450	-119166	+	TSC_hg19_v1_chr4_+_103422737 M55643	-119227	+	TSC_hg19_v1_chr4_+_103422554 M58603	-119434	+	EU009130 TSC_hg19_v1_chr4_-_103682110 AK300015 AB209846 AK312827	140097	-	TSC_hg19_v1_chr4_-_103682126 U60337 AK291598 BC015743	140146	-	NM_005908 TSC_hg19_v1_chr4_-_103682152	140175	-	AK291450|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##M55643|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##M58603|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##EU009130|MANBA|4126|mannosidase, beta A, lysosomal##AK300015|MANBA|4126|mannosidase, beta A, lysosomal##AB209846|MANBA|4126|mannosidase, beta A, lysosomal##AK312827|MANBA|4126|mannosidase, beta A, lysosomal##U60337|MANBA|4126|mannosidase, beta A, lysosomal##AK291598|MANBA|4126|mannosidase, beta A, lysosomal##BC015743|MANBA|4126|mannosidase, beta A, lysosomal##NM_005908|MANBA|4126|mannosidase, beta A, lysosomal	0.893425	CTCF.p2:-19:0.893
chr6	33730090	33730216	reg1009358.p1	11.366	+	AK056586 AK223572 AK289935 BC089389 NM_001142883 NM_054111	-15432	-	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	-50640	-	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	-50690	-	AK301083 NM_001143944	24562	-	TSC_hg19_v1_chr6_-_33756897 BC051803	26738	-	BC039864 NM_181336 TSC_hg19_v1_chr6_-_33756906	26757	-	AK056586|IP6K3|117283|inositol hexakisphosphate kinase 3##AK223572|IP6K3|117283|inositol hexakisphosphate kinase 3##AK289935|IP6K3|117283|inositol hexakisphosphate kinase 3##BC089389|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_001142883|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_054111|IP6K3|117283|inositol hexakisphosphate kinase 3##AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##AK301083|LEMD2|221496|LEM domain containing 2##NM_001143944|LEMD2|221496|LEM domain containing 2##BC051803|LEMD2|221496|LEM domain containing 2##BC039864|LEMD2|221496|LEM domain containing 2##NM_181336|LEMD2|221496|LEM domain containing 2	0.993781	CTCF.p2:7:0.994
chr14	33944999	33945121	reg1009808.p1	11.365	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-536570	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1146524	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-1398554	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	475089	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	986427	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	1063825	-	AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein	0.304573	CTCF.p2:-2:0.305
chr2	11040464	11040576	reg1008172.p2	11.365	+	TSC_hg19_v1_chr2_-_10952912 AK294347 D49489 BC001312 NM_005742	-87600	-	TSC_hg19_v1_chr2_-_10952851 DQ891186 DQ894369 AK289428	-87692	-	TSC_hg19_v1_chr2_-_10942759 AK225496 U79278	-97816	-	BC026110 NM_002236 TSC_hg19_v1_chr2_+_11052109	11565	+	AK057872 NM_182500 BC120930 AK292828	232696	+	BC027625 NM_152391 TSC_hg19_v1_chr2_+_11295562	255031	+	AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6##D49489|PDIA6|10130|protein disulfide isomerase family A, member 6##BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6##NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6##AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6##AK225496|PDIA6|10130|protein disulfide isomerase family A, member 6##U79278|PDIA6|10130|protein disulfide isomerase family A, member 6##BC026110|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##NM_002236|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##AK057872|C2orf50|130813|chromosome 2 open reading frame 50##NM_182500|C2orf50|130813|chromosome 2 open reading frame 50##BC120930|C2orf50|130813|chromosome 2 open reading frame 50##AK292828|C2orf50|130813|chromosome 2 open reading frame 50##BC027625|PQLC3|130814|PQ loop repeat containing 3##NM_152391|PQLC3|130814|PQ loop repeat containing 3	0.995501	CTCF.p2:-3:0.996
chr21	36173931	36174066	reg1010064.p1	11.365	+	AF448438 AF448439 NM_053277	-132311	+	BT007363 CU678256 AF303449 U85266 TSC_hg19_v1_chr21_-_35987486 BC002864 AK092184 AX747397 NM_004414 AY325903	-186652	-	NM_203417 U85265	-187254	-	S76350 GU070939 TSC_hg19_v1_chr21_-_36231874	57838	-	S76345 S76346 GU070941 TSC_hg19_v1_chr21_-_36252995	78938	-	TSC_hg19_v1_chr21_-_36259250 EU093088	85274	-	AF448438|CLIC6|54102|chloride intracellular channel 6##AF448439|CLIC6|54102|chloride intracellular channel 6##NM_053277|CLIC6|54102|chloride intracellular channel 6##BT007363|RCAN1|1827|regulator of calcineurin 1##AF303449|RCAN1|1827|regulator of calcineurin 1##U85266|RCAN1|1827|regulator of calcineurin 1##BC002864|RCAN1|1827|regulator of calcineurin 1##AK092184|RCAN1|1827|regulator of calcineurin 1##NM_004414|RCAN1|1827|regulator of calcineurin 1##AY325903|RCAN1|1827|regulator of calcineurin 1##NM_203417|RCAN1|1827|regulator of calcineurin 1##U85265|RCAN1|1827|regulator of calcineurin 1##S76350|RUNX1|861|runt-related transcription factor 1##S76345|RUNX1|861|runt-related transcription factor 1##S76346|RUNX1|861|runt-related transcription factor 1	0.250287	CTCF.p2:3:0.250
chr2	176962439	176962536	reg1007449.p2	11.365	+	TSC_hg19_v1_chr2_+_176957451 NM_000523 AB463753	-4943	+	NM_001080458	-13798	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	-95512	-	BC069088 BC121103 BC121104 NM_021193	2042	+	TSC_hg19_v1_chr2_+_176969236 AK309681	6754	+	TSC_hg19_v1_chr2_+_176972007 BC109394 NM_021192	9569	+	NM_000523|HOXD13|3239|homeobox D13##NM_001080458|EVX2|344191|even-skipped homeobox 2##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715##BC069088|HOXD12|3238|homeobox D12##BC121103|HOXD12|3238|homeobox D12##BC121104|HOXD12|3238|homeobox D12##NM_021193|HOXD12|3238|homeobox D12##BC109394|HOXD11|3237|homeobox D11##NM_021192|HOXD11|3237|homeobox D11	0.421373	CTCF.p2:5:0.421
chr1	6169015	6169126	reg1006481.p1	11.364	+	AK315858 NM_001199863	-62897	+	AK131252 NM_001199862	-63090	+	AK124696 NM_001199860	-74726	+	AK127046 AB527126 AF425231 NM_015557 TSC_hg19_v1_chr1_-_6240331	71137	-	TSC_hg19_v1_chr1_-_6259655 CR456873 BC046108 BC058887 AK097075 AK311749 D17652 BC066314 BC035566 NM_000983	90583	-	BC119780 TSC_hg19_v1_chr1_+_6266175 NM_207396	97094	+	AK315858|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199863|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK131252|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199862|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK124696|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199860|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK127046|CHD5|26038|chromodomain helicase DNA binding protein 5##AF425231|CHD5|26038|chromodomain helicase DNA binding protein 5##NM_015557|CHD5|26038|chromodomain helicase DNA binding protein 5##CR456873|RPL22|6146|ribosomal protein L22##BC058887|RPL22|6146|ribosomal protein L22##AK097075|RPL22|6146|ribosomal protein L22##AK311749|RPL22|6146|ribosomal protein L22##D17652|RPL22|6146|ribosomal protein L22##BC066314|RPL22|6146|ribosomal protein L22##BC035566|RPL22|6146|ribosomal protein L22##NM_000983|RPL22|6146|ribosomal protein L22##BC119780|RNF207|388591|ring finger protein 207##NM_207396|RNF207|388591|ring finger protein 207	0.619703	CTCF.p2:6:0.620
chr16	50705716	50705832	reg1007891.p1	11.364	+	TSC_hg19_v1_chr16_-_50647562 AK124375	-58196	-	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	-123448	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	-302944	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	9403	-	TSC_hg19_v1_chr16_-_50715246 NM_001144972 NM_153337 NM_182854	9527	-	AF178930 AY187243 NM_022162 AY187244 AY187246 AB527390	25327	+	BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20##NM_001144972|SNX20|124460|sorting nexin 20##NM_153337|SNX20|124460|sorting nexin 20##NM_182854|SNX20|124460|sorting nexin 20##AF178930|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187243|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_022162|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187244|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187246|NOD2|64127|nucleotide-binding oligomerization domain containing 2	0.948067	CTCF.p2:-16:0.948
chr17	38268007	38268129	reg1006522.p1	11.364	+	TSC_hg19_v1_chr17_-_38256983 M24898 NM_021724	-11094	-	M34339 X72631 TSC_hg19_v1_chr17_-_38256833 BC047875 AK315270 AK300155 BC056148	-11346	-	TSC_hg19_v1_chr17_-_38252967 AY429554	-15087	-	CR749360 TSC_hg19_v1_chr17_+_38278225	10154	+	NM_001012241 BC118997 BC122543	10759	+	EU831932 EU832027 TSC_hg19_v1_chr17_+_38279490	11411	+	M24898|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##NM_021724|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AY429554|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##CR749360|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##NM_001012241|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##BC118997|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##BC122543|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##EU831932|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##EU832027|MSL1|339287|male-specific lethal 1 homolog (Drosophila)	0.015099	
chr18	61245743	61245856	reg1008035.p2	11.364	+	AF411191 BC103884 BC103885 NM_080474	-22407	+	NM_002639 AK312765 BC020713 AK301667 U04313	-101619	+	AK290932 AK309322 AK311041 TSC_hg19_v1_chr18_-_61089700 BC009692 AK308892 NM_004869	-156076	-	NM_012397 AK290323 AK313486 AK296797 AK303867 AK303979 AJ001696 AJ001697 AK298049 BC101821 BC143402 AJ001698	8798	+	U19557 BC008399 BC017401 NM_002974 AK292212	65709	-	S66896 AB046399 AK222746 AK222753 AK308383 AK310948 AK314805 BC005224 BC008483 AK307261 NM_006919	83355	-	AF411191|SERPINB12|89777|serpin peptidase inhibitor, clade B (ovalbumin), member 12##BC103884|SERPINB12|89777|serpin peptidase inhibitor, clade B (ovalbumin), member 12##BC103885|SERPINB12|89777|serpin peptidase inhibitor, clade B (ovalbumin), member 12##NM_080474|SERPINB12|89777|serpin peptidase inhibitor, clade B (ovalbumin), member 12##NM_002639|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##AK312765|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##BC020713|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##AK301667|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##U04313|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##AK290932|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK309322|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK311041|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##BC009692|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK308892|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##NM_004869|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##NM_012397|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK290323|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK313486|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK296797|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK303867|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK303979|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AJ001696|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AJ001697|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK298049|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##BC101821|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##BC143402|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AJ001698|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##U19557|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##BC008399|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##BC017401|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##NM_002974|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##AK292212|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##S66896|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AB046399|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK222746|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK222753|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK308383|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK310948|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK314805|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##BC005224|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##BC008483|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##NM_006919|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3	0.962468	CTCF.p2:3:0.962
chr6_ssto_hap7	1140314	1140417	reg1007868.p1	11.364	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.993051	CTCF.p2:5:0.993
chr9	80984666	80984800	reg1010041.p1	11.364	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	-72675	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	-133703	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-338549	-	TSC_hg19_v1_chr9_+_82186879 NM_007005	1202153	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	1202791	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	1202952	+	AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.960788	CTCF.p2:3:0.961
chr2	85934466	85934601	reg1009275.p1	11.363	+	NM_006433 NM_012483 X54101 AK310057 AK311537 AK311012 AK311657 BC063245 AK304728 TSC_hg19_v1_chr2_+_85921514 DQ892267 DQ895468 BC023576 CR541859 X05044	-13053	+	NM_000542 NM_198843	-38670	-	TSC_hg19_v1_chr2_-_85888519 AB439563 AB439564 AB439565 AB439566	-45958	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	46472	+	AY152815 NM_001042437	160259	-	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	181553	-	NM_006433|GNLY|10578|granulysin##NM_012483|GNLY|10578|granulysin##X54101|GNLY|10578|granulysin##AK310057|GNLY|10578|granulysin##AK311537|GNLY|10578|granulysin##AK311012|GNLY|10578|granulysin##AK311657|GNLY|10578|granulysin##BC063245|GNLY|10578|granulysin##AK304728|GNLY|10578|granulysin##DQ892267|GNLY|10578|granulysin##DQ895468|GNLY|10578|granulysin##BC023576|GNLY|10578|granulysin##CR541859|GNLY|10578|granulysin##X05044|GNLY|10578|granulysin##NM_000542|SFTPB|6439|surfactant protein B##NM_198843|SFTPB|6439|surfactant protein B##AB439563|SFTPB|6439|surfactant protein B##AB439565|SFTPB|6439|surfactant protein B##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	0.998993	CTCF.p2:-1:0.999
chr10	130829962	130830061	reg1007494.p1	11.362	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-905483	-	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	-984157	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-1124556	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	435460	+	TSC_hg19_v1_chr10_+_131265507 BC000824	435503	+	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	932042	-	NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3	0.118374	
chr15	72095181	72095309	reg1007224.p2	11.362	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	-255665	+	NM_024817 BC140868	-661435	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-687374	-	AF121129 NM_014249 NM_016346 AF148128	7667	+	AK097557 NM_001166340	311353	+	NM_001172109 NM_001172110	313973	+	AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172109|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172110|SENP8|123228|SUMO/sentrin specific peptidase family member 8	1.006147	CTCF.p2:-10:0.970
chr2	15299959	15300109	reg1010415.p1	11.362	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	-527183	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	-527213	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-2441637	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	401395	-	TSC_hg19_v1_chr2_-_15701451 BC108693 AF388385 BC131735 NM_015909 AB621813	401424	-	NM_004939 X70649	431735	+	AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence##BC108693|NBAS|51594|neuroblastoma amplified sequence##AF388385|NBAS|51594|neuroblastoma amplified sequence##BC131735|NBAS|51594|neuroblastoma amplified sequence##NM_015909|NBAS|51594|neuroblastoma amplified sequence##AB621813|NBAS|51594|neuroblastoma amplified sequence##NM_004939|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##X70649|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	0.998705	CTCF.p2:-5:0.999
chr22	50714647	50714741	reg1000614.p1	11.361	+	AF001008 CU013114 CU013402 AB463125 DQ891728 DQ894905 CR456514 U92268 AF001174 Y14440 AF031135 U53442 AK291845 BC027933 NM_002751 AK299745	-5938	-	CU677413 CU013115 CU013403 DQ892787 DQ896034 AB587470 X79483 AK308768 CR456515 BC015741 NM_002969 TSC_hg19_v1_chr22_-_50700113 Y10487	-14586	-	AK307421 TSC_hg19_v1_chr22_-_50699740 AK294422 BX640648 AK289770	-14955	-	TSC_hg19_v1_chr22_-_50720334 AK074932 AK126394	5654	-	TSC_hg19_v1_chr22_-_50720982 AK056543	6281	-	NM_012401	31306	-	AF001008|MAPK11|5600|mitogen-activated protein kinase 11##CU013114|MAPK11|5600|mitogen-activated protein kinase 11##CU013402|MAPK11|5600|mitogen-activated protein kinase 11##DQ891728|MAPK11|5600|mitogen-activated protein kinase 11##DQ894905|MAPK11|5600|mitogen-activated protein kinase 11##CR456514|MAPK11|5600|mitogen-activated protein kinase 11##U92268|MAPK11|5600|mitogen-activated protein kinase 11##AF001174|MAPK11|5600|mitogen-activated protein kinase 11##Y14440|MAPK11|5600|mitogen-activated protein kinase 11##AF031135|MAPK11|5600|mitogen-activated protein kinase 11##U53442|MAPK11|5600|mitogen-activated protein kinase 11##AK291845|MAPK11|5600|mitogen-activated protein kinase 11##BC027933|MAPK11|5600|mitogen-activated protein kinase 11##NM_002751|MAPK11|5600|mitogen-activated protein kinase 11##AK299745|MAPK11|5600|mitogen-activated protein kinase 11##CU013115|MAPK12|6300|mitogen-activated protein kinase 12##CU013403|MAPK12|6300|mitogen-activated protein kinase 12##DQ892787|MAPK12|6300|mitogen-activated protein kinase 12##DQ896034|MAPK12|6300|mitogen-activated protein kinase 12##X79483|MAPK12|6300|mitogen-activated protein kinase 12##AK308768|MAPK12|6300|mitogen-activated protein kinase 12##CR456515|MAPK12|6300|mitogen-activated protein kinase 12##BC015741|MAPK12|6300|mitogen-activated protein kinase 12##NM_002969|MAPK12|6300|mitogen-activated protein kinase 12##Y10487|MAPK12|6300|mitogen-activated protein kinase 12##AK307421|MAPK12|6300|mitogen-activated protein kinase 12##AK294422|MAPK12|6300|mitogen-activated protein kinase 12##BX640648|MAPK12|6300|mitogen-activated protein kinase 12##AK289770|MAPK12|6300|mitogen-activated protein kinase 12##AK074932|PLXNB2|23654|plexin B2##AK126394|PLXNB2|23654|plexin B2##AK056543|PLXNB2|23654|plexin B2##NM_012401|PLXNB2|23654|plexin B2	0.0	
chr1	237032301	237032416	reg1006604.p1	11.360	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-73523	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	-73781	+	AK315250 NM_001103 TSC_hg19_v1_chr1_+_236849798 AK297886 M86406 AB209521 BC051770 BC047901 AB590561 CU690840	-182496	+	NM_001035 X98330 Y08218	173415	+	AK314151 NM_021186	1021863	-	TSC_hg19_v1_chr1_+_239550016 AK056349	2517584	+	U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK315250|ACTN2|88|actinin, alpha 2##NM_001103|ACTN2|88|actinin, alpha 2##AK297886|ACTN2|88|actinin, alpha 2##M86406|ACTN2|88|actinin, alpha 2##AB209521|ACTN2|88|actinin, alpha 2##BC051770|ACTN2|88|actinin, alpha 2##BC047901|ACTN2|88|actinin, alpha 2##NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3	0.206147	CTCF.p2:-3:0.206
chr13	27056859	27056996	reg1011087.p1	11.359	+	BC069634 BC104492 BC105950 BC107601 NM_001260 X85753 AY702976 CU686950	-228161	+	TSC_hg19_v1_chr13_+_26828240 BC094784	-228686	+	TSC_hg19_v1_chr13_-_26796406 AF293342 AJ010346 CR749238 AK312435 NM_005977	-260502	-	TSC_hg19_v1_chr13_+_27131854 AK289845 BC050283 NM_006646	74907	+	TSC_hg19_v1_chr13_+_27131892 AF454702	74975	+	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	277926	-	BC069634|CDK8|1024|cyclin-dependent kinase 8##BC104492|CDK8|1024|cyclin-dependent kinase 8##BC105950|CDK8|1024|cyclin-dependent kinase 8##BC107601|CDK8|1024|cyclin-dependent kinase 8##NM_001260|CDK8|1024|cyclin-dependent kinase 8##X85753|CDK8|1024|cyclin-dependent kinase 8##AY702976|CDK8|1024|cyclin-dependent kinase 8##BC094784|CDK8|1024|cyclin-dependent kinase 8##AF293342|RNF6|6049|ring finger protein (C3H2C3 type) 6##AJ010346|RNF6|6049|ring finger protein (C3H2C3 type) 6##CR749238|RNF6|6049|ring finger protein (C3H2C3 type) 6##AK312435|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_005977|RNF6|6049|ring finger protein (C3H2C3 type) 6##AK289845|WASF3|10810|WAS protein family, member 3##BC050283|WASF3|10810|WAS protein family, member 3##NM_006646|WASF3|10810|WAS protein family, member 3##AF454702|WASF3|10810|WAS protein family, member 3##AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12	0.645606	CTCF.p2:-11:0.646
chr2	48333778	48333912	reg1009465.p1	11.359	+	BC130445 BC136480 AK292877 AF176706 AF174599 AK223592 BC043258 AY827075 TSC_hg19_v1_chr2_-_48132864 AK297444 NM_001190274	-201052	-	AK304140 AK315108 NM_025133	-217994	-	BC071594 NM_000179 TSC_hg19_v1_chr2_+_48010283 U28946 D89646 BC104665 U54777 BC004246 AK293921 AK308392 AB590153 DQ892898	-323549	+	TSC_hg19_v1_chr2_+_48541851 NM_002158 BC063305	207973	+	AY134855 NM_001135629 NM_001193475 NM_152994 TSC_hg19_v1_chr2_+_48667936 AK172762 AK122900 AY092062 BC111059 AK307755 BC117279 BC143466 BC143463 BC040721	334127	+	AK309740 NM_001198593 TSC_hg19_v1_chr2_+_48757177	423276	+	BC130445|FBXO11|80204|F-box protein 11##BC136480|FBXO11|80204|F-box protein 11##AK292877|FBXO11|80204|F-box protein 11##AF176706|FBXO11|80204|F-box protein 11##AF174599|FBXO11|80204|F-box protein 11##AK223592|FBXO11|80204|F-box protein 11##BC043258|FBXO11|80204|F-box protein 11##AY827075|FBXO11|80204|F-box protein 11##AK297444|FBXO11|80204|F-box protein 11##NM_001190274|FBXO11|80204|F-box protein 11##AK304140|FBXO11|80204|F-box protein 11##AK315108|FBXO11|80204|F-box protein 11##NM_025133|FBXO11|80204|F-box protein 11##BC071594|MSH6|2956|mutS homolog 6 (E. coli)##NM_000179|MSH6|2956|mutS homolog 6 (E. coli)##U28946|MSH6|2956|mutS homolog 6 (E. coli)##D89646|MSH6|2956|mutS homolog 6 (E. coli)##BC104665|MSH6|2956|mutS homolog 6 (E. coli)##U54777|MSH6|2956|mutS homolog 6 (E. coli)##BC004246|MSH6|2956|mutS homolog 6 (E. coli)##AK293921|MSH6|2956|mutS homolog 6 (E. coli)##AK308392|MSH6|2956|mutS homolog 6 (E. coli)##DQ892898|MSH6|2956|mutS homolog 6 (E. coli)##NM_002158|FOXN2|3344|forkhead box N2##BC063305|FOXN2|3344|forkhead box N2##AY134855|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_001135629|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_001193475|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_152994|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK172762|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK122900|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AY092062|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC111059|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK307755|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC117279|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC143466|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC143463|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC040721|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	0.992307	CTCF.p2:10:0.992
chr3	126108206	126108330	reg1008141.p1	11.359	+	TSC_hg19_v1_chr3_-_126076252 NM_014079 BC036733	-32053	-	AF052732 BC027241 AK222535 AK222694 TSC_hg19_v1_chr3_-_125899430 AK294392 AK294530 AB209299 NM_012190	-208825	-	TSC_hg19_v1_chr3_-_125899364 AK307699 AK308112	-208896	-	AK097402 NM_182628 TSC_hg19_v1_chr3_+_126113866	5555	+	TSC_hg19_v1_chr3_-_126194735 AY936556	86457	-	DQ079590 NM_001040653 NM_025112 TSC_hg19_v1_chr3_-_126194793	86521	-	NM_014079|KLF15|28999|Kruppel-like factor 15##BC036733|KLF15|28999|Kruppel-like factor 15##AF052732|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##BC027241|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222535|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222694|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294392|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294530|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AB209299|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##NM_012190|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK307699|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK308112|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK097402|CCDC37|348807|coiled-coil domain containing 37##NM_182628|CCDC37|348807|coiled-coil domain containing 37##AY936556|ZXDC|79364|ZXD family zinc finger C##DQ079590|ZXDC|79364|ZXD family zinc finger C##NM_001040653|ZXDC|79364|ZXD family zinc finger C##NM_025112|ZXDC|79364|ZXD family zinc finger C	0.066817	
chr3	163208148	163208261	reg1008330.p1	11.359	+	NM_001080440	-1993609	+	AF458592 BC037817 NM_001040100	-2118396	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-2269083	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	1588074	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	1706301	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	2346989	-	NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase	0.999327	CTCF.p2:6:0.999
chr14	106145461	106145607	reg1011089.p1	11.358	+	TSC_hg19_v1_chr14_-_106111114 AJ294731	-34418	-	BC040042 TSC_hg19_v1_chr14_-_106110945	-34611	-	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	-53198	-	TSC_hg19_v1_chr14_-_106174914 BC113815 AJ294729	29419	-	TSC_hg19_v1_chr14_-_106208542 AF487336	63015	-	AF150959 TSC_hg19_v1_chr14_-_106208714 S76144	63176	-	AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AJ294729|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.811567	CTCF.p2:8:0.812
chr4	25441694	25441809	reg1007988.p1	11.358	+	TSC_hg19_v1_chr4_+_25378893 AK292336 AF191338	-62789	+	TSC_hg19_v1_chr4_+_25378862 NM_013367 BC059383	-62906	+	TSC_hg19_v1_chr4_+_25314405 NM_024936 BC157834 BC171821 AK299211 AK309675 AY629351 BC016914 AF161537 CU677765	-127304	+	NM_001177998 NM_006424 AK292675 AF111856 AK075046 TSC_hg19_v1_chr4_+_25657473 AF146796 BC142704 BC146666	215709	+	NM_001177999 AK314514	216339	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	422803	-	AK292336|ANAPC4|29945|anaphase promoting complex subunit 4##AF191338|ANAPC4|29945|anaphase promoting complex subunit 4##NM_013367|ANAPC4|29945|anaphase promoting complex subunit 4##BC059383|ANAPC4|29945|anaphase promoting complex subunit 4##NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4##NM_001177998|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_006424|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK292675|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF111856|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK075046|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF146796|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC142704|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC146666|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)	0.996761	CTCF.p2:-15:0.997
chr11	128718840	128718968	reg1009321.p1	11.357	+	BC136360 BC136361 BC074752 NM_000220 U12541 AK314267 AK290797	-6526	-	TSC_hg19_v1_chr11_+_128564132 AB385119 AY029368 CU674822 DQ892582 DQ896858	-154762	+	TSC_hg19_v1_chr11_+_128563997 X67001 S45205 BC010115 BC001670	-154849	+	U12544 U12545 AK308032 U12543 U03884 AK308033 BC063109 NM_153764 NM_153765 NM_153766 NM_153767 U12542	18295	-	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	42436	+	DQ891644 DQ894833 TSC_hg19_v1_chr11_-_128774571	55625	-	BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AY029368|FLI1|2313|Friend leukemia virus integration 1##DQ892582|FLI1|2313|Friend leukemia virus integration 1##DQ896858|FLI1|2313|Friend leukemia virus integration 1##X67001|FLI1|2313|Friend leukemia virus integration 1##S45205|FLI1|2313|Friend leukemia virus integration 1##BC010115|FLI1|2313|Friend leukemia virus integration 1##BC001670|FLI1|2313|Friend leukemia virus integration 1##U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##DQ891644|C11orf45|219833|chromosome 11 open reading frame 45##DQ894833|C11orf45|219833|chromosome 11 open reading frame 45	0.538105	CTCF.p2:6:0.538
chr6	137289412	137289529	reg1008220.p2	11.357	+	AK316095 BC087842 NM_001008783 AK295424	-46017	+	TSC_hg19_v1_chr6_+_137143749 U76560 BC006268 AB529018 CR542054 CR542076 CU675317 CU689196	-145695	+	TSC_hg19_v1_chr6_+_137143699 NM_000288 BC031606 U88871	-145768	+	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	76368	-	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	76775	-	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	205281	-	AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##U76560|PEX7|5191|peroxisomal biogenesis factor 7##BC006268|PEX7|5191|peroxisomal biogenesis factor 7##CR542054|PEX7|5191|peroxisomal biogenesis factor 7##CR542076|PEX7|5191|peroxisomal biogenesis factor 7##NM_000288|PEX7|5191|peroxisomal biogenesis factor 7##BC031606|PEX7|5191|peroxisomal biogenesis factor 7##U88871|PEX7|5191|peroxisomal biogenesis factor 7##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2	0.708827	CTCF.p2:-6:0.709
chr1	150436967	150437065	reg1007009.p1	11.356	+	TSC_hg19_v1_chr1_+_150337184 AK291703 AK304380 AK056707 AK308148 AF161362 BC045623 AB007929 EU832460 EU832492 EU832542 EU832573 AB527168	-99794	+	NM_015203 TSC_hg19_v1_chr1_+_150337109	-99960	+	TSC_hg19_v1_chr1_+_150336622 BX641025	-100371	+	TSC_hg19_v1_chr1_+_150459910 AK298773 AK022590 BC000541 AK315507 AK222814 AY450558	22876	+	TSC_hg19_v1_chr1_+_150459916 AK225368 BC009997 NM_025150 AB384782 BC007824	22916	+	NM_001202858 NM_004425 NM_022664 TSC_hg19_v1_chr1_+_150480582 AK097205 AK097046 BC023505 DQ010946 DQ112074 U68186 U68187	43518	+	AK291703|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AK304380|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AK056707|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AK308148|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AF161362|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##BC045623|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AB007929|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##EU832460|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##EU832492|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##EU832542|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##EU832573|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##NM_015203|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##BX641025|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AK298773|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AK022590|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##BC000541|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AK315507|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AK222814|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AY450558|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AK225368|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##BC009997|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##NM_025150|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##BC007824|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##NM_001202858|ECM1|1893|extracellular matrix protein 1##NM_004425|ECM1|1893|extracellular matrix protein 1##NM_022664|ECM1|1893|extracellular matrix protein 1##AK097205|ECM1|1893|extracellular matrix protein 1##AK097046|ECM1|1893|extracellular matrix protein 1##BC023505|ECM1|1893|extracellular matrix protein 1##U68186|ECM1|1893|extracellular matrix protein 1##U68187|ECM1|1893|extracellular matrix protein 1	0.991846	CTCF.p2:-14:0.992
chr17	17045294	17045421	reg1008904.p1	11.356	+	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	-99393	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	-169953	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-451753	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	64256	-	TSC_hg19_v1_chr17_-_17109636 BC031263 AK295282 NM_178836	64300	-	TSC_hg19_v1_chr17_-_17140464 AF517523 BC015687	95088	-	NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK090899|PLD6|201164|phospholipase D family, member 6##BC031263|PLD6|201164|phospholipase D family, member 6##AK295282|PLD6|201164|phospholipase D family, member 6##NM_178836|PLD6|201164|phospholipase D family, member 6##AF517523|FLCN|201163|folliculin##BC015687|FLCN|201163|folliculin	0.531448	CTCF.p2:0:0.531
chr19	42942696	42942803	reg1023708.p1	11.355	+	AK309893 AK292482 BC029961 BC070041 NM_005357 U40002	-11211	-	TSC_hg19_v1_chr19_-_42928157 BC029301	-14536	-	TSC_hg19_v1_chr19_+_42901325 AK311181	-41437	+	BC093946 BC112095 AK292985 AY358433 NM_198477 AY598464	4375	-	X16356 TSC_hg19_v1_chr19_-_43031473	88660	-	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	89843	-	AK292482|LIPE|3991|lipase, hormone-sensitive##BC029961|LIPE|3991|lipase, hormone-sensitive##BC070041|LIPE|3991|lipase, hormone-sensitive##NM_005357|LIPE|3991|lipase, hormone-sensitive##U40002|LIPE|3991|lipase, hormone-sensitive##BC029301|LIPE|3991|lipase, hormone-sensitive##BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17##BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17##NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)	0.186701	
chr1	24077911	24078028	reg1008380.p1	11.354	+	L47345 TSC_hg19_v1_chr1_+_24069969 BC002883 AK313079 AB527691 DQ893026 DQ896270 AF116729	-7986	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	-8065	+	TSC_hg19_v1_chr1_+_24018295 BC018970	-59670	+	TSC_hg19_v1_chr1_-_24104774 AK055276 AL049675	26800	-	TSC_hg19_v1_chr1_+_24104875 NM_020362 AF221595 AF271784 AF218024	26904	+	AK296662 TSC_hg19_v1_chr1_+_24104906	26937	+	L47345|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##BC002883|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK313079|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##DQ893026|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##DQ896270|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AF116729|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##BC018970|RPL11|6135|ribosomal protein L11##AL049675|LOC100506963|100506963|uncharacterized LOC100506963##NM_020362|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AF221595|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AF271784|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AF218024|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AK296662|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1	0.976461	CTCF.p2:10:0.976
chr14	22855953	22856087	reg1009417.p1	11.354	+	AB463964 NM_001001912 AY726598	-722698	+	NM_001005466 AB529274 BC137371 BC137382	-752974	-	AB528817 NM_001005465	-817146	-	X58763 TSC_hg19_v1_chr14_+_22989364	133329	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	202066	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	202114	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.999912	CTCF.p2:-21:1.000
chr2	55402817	55402959	reg1009725.p1	11.354	+	TSC_hg19_v1_chr2_-_55277709 AY123246 NM_020532 NM_153828 NM_207520	-125173	-	TSC_hg19_v1_chr2_-_55277672 AB040462 AB040463 AY102277 AY102278 AY102279 BC016165 BC068991 BC150182 BC152555	-125206	-	TSC_hg19_v1_chr2_-_55277661 AK075039	-125226	-	NM_001135592	56150	+	AK315683 TSC_hg19_v1_chr2_-_55459408 AK056000 BC029502 NM_152385	56539	-	NM_002954	56652	+	AY123246|RTN4|57142|reticulon 4##NM_020532|RTN4|57142|reticulon 4##NM_153828|RTN4|57142|reticulon 4##NM_207520|RTN4|57142|reticulon 4##AB040462|RTN4|57142|reticulon 4##AB040463|RTN4|57142|reticulon 4##AY102277|RTN4|57142|reticulon 4##AY102278|RTN4|57142|reticulon 4##AY102279|RTN4|57142|reticulon 4##BC016165|RTN4|57142|reticulon 4##BC068991|RTN4|57142|reticulon 4##BC150182|RTN4|57142|reticulon 4##BC152555|RTN4|57142|reticulon 4##AK075039|RTN4|57142|reticulon 4##NM_001135592|RPS27A|6233|ribosomal protein S27a##AK315683|C2orf63|130162|chromosome 2 open reading frame 63##AK056000|C2orf63|130162|chromosome 2 open reading frame 63##BC029502|C2orf63|130162|chromosome 2 open reading frame 63##NM_152385|C2orf63|130162|chromosome 2 open reading frame 63##NM_002954|RPS27A|6233|ribosomal protein S27a	0.157036	
chr11	108568749	108568846	reg1006245.p1	11.353	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-32983	+	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	-104393	-	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	-199602	-	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	724046	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	724102	+	AK095101 TSC_hg19_v1_chr11_+_109963524	1394731	+	AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5##AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C	0.532891	CTCF.p2:-12:0.523
chr14	35610047	35610222	reg1008899.p1	11.353	+	TSC_hg19_v1_chr14_+_35591757 AK301931 BC050339 BC044580 BC001542 AK304066 BC032221 NM_014672 AB002389 BX161394 BX161487 AK303508	-18282	+	AK293717 BX248043 TSC_hg19_v1_chr14_-_35591728	-18444	-	AK000651 AK225512 AK225447 TSC_hg19_v1_chr14_-_35591505 BC063438 BC100021 AY157304 AY157305 NM_017917	-18656	-	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	151437	+	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	151509	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	263790	-	AK301931|KIAA0391|9692|KIAA0391##BC044580|KIAA0391|9692|KIAA0391##BC001542|KIAA0391|9692|KIAA0391##AK304066|KIAA0391|9692|KIAA0391##BC032221|KIAA0391|9692|KIAA0391##NM_014672|KIAA0391|9692|KIAA0391##AB002389|KIAA0391|9692|KIAA0391##BX161394|KIAA0391|9692|KIAA0391##BX161487|KIAA0391|9692|KIAA0391##AK303508|KIAA0391|9692|KIAA0391##AK293717|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BX248043|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK000651|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK225512|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK225447|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BC063438|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BC100021|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AY157304|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AY157305|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##NM_017917|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	0.998949	CTCF.p2:-19:0.999
chr4	6136445	6136581	reg1008975.p1	11.353	+	DQ206871 TSC_hg19_v1_chr4_-_5894794 NM_001014809	-241769	-	BC009987 TSC_hg19_v1_chr4_-_5891940	-244585	-	TSC_hg19_v1_chr4_-_5890302 NM_001313	-246204	-	TSC_hg19_v1_chr4_-_6202277 AK294356 AK307983 AK056126 AM412307 AM412308 AM412309 AM412310 BC026343 NM_001099433 NM_144720	65771	-	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	135055	+	Y18064 TSC_hg19_v1_chr4_+_6271588	135081	+	DQ206871|CRMP1|1400|collapsin response mediator protein 1##NM_001014809|CRMP1|1400|collapsin response mediator protein 1##BC009987|CRMP1|1400|collapsin response mediator protein 1##NM_001313|CRMP1|1400|collapsin response mediator protein 1##AK294356|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK307983|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK056126|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412307|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412308|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412309|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412310|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##BC026343|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_001099433|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_144720|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)	0.075663	
chrX	50323092	50323218	reg1010752.p1	11.353	+	TSC_hg19_v1_chrX_-_50213589 BC137319 BC137320 NM_001013742 AB183864	-109493	-	AJ314764 AJ314765 AJ314766 AJ416458 NM_033031 NM_033670	-295616	+	AK292463 BC126250 BC126252 NM_003886 Y15195	-357495	-	TSC_hg19_v1_chrX_-_50386679 AY044234	63522	-	TSC_hg19_v1_chrX_-_50557118 AB033028 BC151240 NM_020717	233956	-	BC117264 BC117266 NM_005448 BC069155 HQ258214	330603	+	BC137319|DGKK|139189|diacylglycerol kinase, kappa##BC137320|DGKK|139189|diacylglycerol kinase, kappa##NM_001013742|DGKK|139189|diacylglycerol kinase, kappa##AB183864|DGKK|139189|diacylglycerol kinase, kappa##AJ314764|CCNB3|85417|cyclin B3##AJ314765|CCNB3|85417|cyclin B3##AJ314766|CCNB3|85417|cyclin B3##AJ416458|CCNB3|85417|cyclin B3##NM_033031|CCNB3|85417|cyclin B3##NM_033670|CCNB3|85417|cyclin B3##AK292463|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC126250|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC126252|AKAP4|8852|A kinase (PRKA) anchor protein 4##NM_003886|AKAP4|8852|A kinase (PRKA) anchor protein 4##Y15195|AKAP4|8852|A kinase (PRKA) anchor protein 4##AY044234|SHROOM4|57477|shroom family member 4##AB033028|SHROOM4|57477|shroom family member 4##BC151240|SHROOM4|57477|shroom family member 4##NM_020717|SHROOM4|57477|shroom family member 4##BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15	0.993965	CTCF.p2:15:0.994
chr1	116150876	116151056	reg1008570.p1	11.352	+	BC032517 NM_002506 X52599	-270113	-	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	-518850	-	NM_000549	-578552	+	NM_001172411 NM_138959 BC065272 AF481859	33626	+	AB057596 NM_001172412	34283	+	CU692536 DQ893219 DQ896548 D55655 AK225959 TSC_hg19_v1_chr1_-_116311307	160268	-	BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##NM_000549|TSHB|7252|thyroid stimulating hormone, beta##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##DQ893219|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ896548|CASQ2|845|calsequestrin 2 (cardiac muscle)##D55655|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK225959|CASQ2|845|calsequestrin 2 (cardiac muscle)	0.954	CTCF.p2:-7:0.954
chr13	103452631	103452763	reg1007958.p1	11.352	+	AF411385 NM_001159596 NM_017693 TSC_hg19_v1_chr13_+_103451468 AK290658 AK304391 BC112339	-1056	+	BC051860 TSC_hg19_v1_chr13_-_103451388 AY358959 AK074974 AK222567 AK225103 AK309238 BC001297 NM_024089	-1360	-	NM_138779 TSC_hg19_v1_chr13_-_103426169	-26539	-	NM_001204425 BC075084 BC075085 AB209312 AK000166 AK225229 BC020663 BC051813	6963	+	TSC_hg19_v1_chr13_+_103498240 NM_000123 BC031522 AF462447	45512	+	AK294708 TSC_hg19_v1_chr13_+_103498254	45557	+	AF411385|BIVM|54841|basic, immunoglobulin-like variable motif containing##NM_001159596|BIVM|54841|basic, immunoglobulin-like variable motif containing##NM_017693|BIVM|54841|basic, immunoglobulin-like variable motif containing##AK290658|BIVM|54841|basic, immunoglobulin-like variable motif containing##AK304391|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC112339|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC051860|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AY358959|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AK074974|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AK222567|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AK225103|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AK309238|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##BC001297|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##NM_024089|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##NM_138779|C13orf27|93081|chromosome 13 open reading frame 27##NM_001204425|BIVM-ERCC5|100533467|BIVM-ERCC5 readthrough##BC075084|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC075085|BIVM|54841|basic, immunoglobulin-like variable motif containing##AB209312|BIVM-ERCC5|100533467|BIVM-ERCC5 readthrough##AK000166|BIVM|54841|basic, immunoglobulin-like variable motif containing##AK225229|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC020663|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC051813|BIVM|54841|basic, immunoglobulin-like variable motif containing##NM_000123|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##BC031522|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AF462447|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5	0.46962	CTCF.p2:-15:0.470
chr19	54989978	54990119	reg1008261.p1	11.352	+	BC065910 TSC_hg19_v1_chr19_-_54984370 BC024327 NM_145057	-5667	-	BC015921 NM_198988	-15155	-	AL833879 TSC_hg19_v1_chr19_+_54965768	-24336	+	NM_002288 NM_021270 BC057790 AF013250 BC069366 CU686777 HQ448404 EF174570	24025	+	AK310088 TSC_hg19_v1_chr19_+_55084486	94437	+	TSC_hg19_v1_chr19_+_55085256 NM_001130917 NM_006866 U82275 AK130170	95204	+	BC065910|CDC42EP5|148170|CDC42 effector protein (Rho GTPase binding) 5##BC024327|CDC42EP5|148170|CDC42 effector protein (Rho GTPase binding) 5##NM_145057|CDC42EP5|148170|CDC42 effector protein (Rho GTPase binding) 5##BC015921|LENG9|94059|leukocyte receptor cluster (LRC) member 9##NM_198988|LENG9|94059|leukocyte receptor cluster (LRC) member 9##NM_002288|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##NM_021270|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##BC057790|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##AF013250|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##BC069366|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##HQ448404|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##EF174570|LAIR2|3904|leukocyte-associated immunoglobulin-like receptor 2##AK310088|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_001130917|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_006866|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82275|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AK130170|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2	0.997533	CTCF.p2:-21:0.998
chr5	169847944	169848072	reg1010342.p1	11.352	+	BC025707 NM_004137 AK313979	-31361	-	TSC_hg19_v1_chr5_+_169816493 AK311026	-31512	+	DQ148476 NM_001034838	-67128	+	TSC_hg19_v1_chr5_+_169931023 BC035032 NM_001034837 NM_014592	83027	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	362746	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	440923	+	BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##DQ148476|KCNIP1|30820|Kv channel interacting protein 1##NM_001034838|KCNIP1|30820|Kv channel interacting protein 1##BC035032|KCNIP1|30820|Kv channel interacting protein 1##NM_001034837|KCNIP1|30820|Kv channel interacting protein 1##NM_014592|KCNIP1|30820|Kv channel interacting protein 1##AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17	0.999703	CTCF.p2:4:1.000
chr11	121190092	121190210	reg1007478.p1	11.351	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	-26597	+	TSC_hg19_v1_chr11_+_121163484 AK096847 AK223141 AK222686	-26669	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	-26746	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	132798	+	TSC_hg19_v1_chr11_+_121323112 AK309523	133024	+	TSC_hg19_v1_chr11_+_121461071 AK294404	270947	+	BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK096847|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK223141|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK222686|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing	0.055605	
chr17	14479	14599	reg1007261.p1	11.350	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr17_-_31242 AB590049	16717	-	TSC_hg19_v1_chr17_-_31442 NM_003585 D70830	16972	-	NM_001242780 AK054983 BC027928	166482	+	NM_003585|DOC2B|8447|double C2-like domains, beta##D70830|DOC2B|8447|double C2-like domains, beta##NM_001242780|LOC100506388|100506388|uncharacterized LOC100506388##AK054983|LOC100506388|100506388|uncharacterized LOC100506388##BC027928|LOC100506388|100506388|uncharacterized LOC100506388	1.038498	CTCF.p2:-26:0.993
chr16	71645027	71645172	reg1010074.p1	11.348	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	-34127	-	NM_005769 AF131235 NM_001166395 AK026635 AK074746	-85006	+	AK292260 BC030658 AK057330 BC047091 NM_006961	-121884	-	BC005052 NM_001017967 NM_052858 AK307585 BC011893 BC013376 AK056842 AK292185 CU680584	14998	+	AB463166 AM393067 AM393542 BC129927 BC129983 NM_015020	103601	-	TSC_hg19_v1_chr16_-_71757789 AK124678	112665	-	X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase##NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19##BC005052|MARVELD3|91862|MARVEL domain containing 3##NM_001017967|MARVELD3|91862|MARVEL domain containing 3##NM_052858|MARVELD3|91862|MARVEL domain containing 3##AK307585|MARVELD3|91862|MARVEL domain containing 3##BC011893|MARVELD3|91862|MARVEL domain containing 3##BC013376|MARVELD3|91862|MARVEL domain containing 3##AK056842|MARVELD3|91862|MARVEL domain containing 3##AK292185|MARVELD3|91862|MARVEL domain containing 3##AM393067|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AM393542|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129927|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129983|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##NM_015020|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AK124678|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2	1.103162	CTCF.p2:0:1.000
chr19	51041114	51041215	reg1005685.p2	11.348	+	CU688154 TSC_hg19_v1_chr19_-_51017942 BC066359 NM_001024656	-23299	-	TSC_hg19_v1_chr19_-_51017156 NM_001114598	-24009	-	AF247787 NM_138334 TSC_hg19_v1_chr19_-_51014412 BC051380 BC062416 AK131052	-26754	-	BC131897 NM_001080457	30126	-	AL136594 NM_032298	100137	-	NM_001160328 NM_001160329 BC031067 BC028379 TSC_hg19_v1_chr19_-_51143094	101961	-	BC066359|ASPDH|554235|aspartate dehydrogenase domain containing##NM_001024656|ASPDH|554235|aspartate dehydrogenase domain containing##NM_001114598|ASPDH|554235|aspartate dehydrogenase domain containing##AF247787|JOSD2|126119|Josephin domain containing 2##NM_138334|JOSD2|126119|Josephin domain containing 2##BC051380|JOSD2|126119|Josephin domain containing 2##BC062416|JOSD2|126119|Josephin domain containing 2##AK131052|JOSD2|126119|Josephin domain containing 2##BC131897|LRRC4B|94030|leucine rich repeat containing 4B##NM_001080457|LRRC4B|94030|leucine rich repeat containing 4B##AL136594|SYT3|84258|synaptotagmin III##NM_032298|SYT3|84258|synaptotagmin III##NM_001160328|SYT3|84258|synaptotagmin III##NM_001160329|SYT3|84258|synaptotagmin III##BC031067|SYT3|84258|synaptotagmin III##BC028379|SYT3|84258|synaptotagmin III	1.066479	CTCF.p2:5:0.801
chr7	23586728	23586853	reg1007340.p2	11.348	+	CU677835 DQ892442 DQ895653 AB528532 TSC_hg19_v1_chr7_-_23571604 BC069011 BC017094 U53209 AB097048 AK300565 AK311687 AK314801 AK300741 AK310719 AK298815 NM_013293	-15226	-	TSC_hg19_v1_chr7_+_23530136 BC026177	-56623	+	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	-76792	-	TSC_hg19_v1_chr7_+_23637005 NM_138771 AK289911 AY358713 AX721042	50225	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	133033	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	163126	+	DQ892442|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##DQ895653|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC069011|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC017094|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##U53209|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AB097048|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK300565|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK311687|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK314801|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK300741|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK310719|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK298815|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##NM_013293|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_138771|CCDC126|90693|coiled-coil domain containing 126##AK289911|CCDC126|90693|coiled-coil domain containing 126##AY358713|CCDC126|90693|coiled-coil domain containing 126##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31	1.90363	CTCF.p2:6:0.999	CTCF.p2:-86:0.904
chr13	47548181	47548319	reg1010129.p1	11.347	+	AK314132 BX647777 AK302787 NM_000621 NM_001165947	-77183	-	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	-176935	-	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-420743	+	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1027201	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	1063564	+	TSC_hg19_v1_chr13_-_48612129 AK316271	1063858	-	AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##AK316271|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.85573	CTCF.p2:-3:0.856
chrX	154209228	154209380	reg1009919.p1	11.347	+	TSC_hg19_v1_chrX_+_154114626 NM_012151 BC071963 AB462986 AM393473 AM393736 BC039693 DQ896667 NM_001007523 NM_001007524	-94675	+	CU692668 AK313707 BC111967 BC111969 M90707 BC022513 AK289947 BC064380 BC098389 NM_019863	-94801	-	BC130510 BC130512 AF254576 NM_001017990 NM_080720 BC134365 HQ258044 BC101415 BC101417 BC101418 BC128034 CR542230	-96018	+	FN811132 AX746360 X01179 K01740 BC150305 AK292902 M14113 NM_000132 AK307726	41594	-	NM_023934 AJ272054 BC000255 AF320778 AK313143 BC072685 TSC_hg19_v1_chrX_+_154255191 BC108657 CU674108 AB528138 AM393227 AM393536 AY032594	45834	+	AK295164 TSC_hg19_v1_chrX_-_154255216	45911	-	NM_012151|F8A1|8263|coagulation factor VIII-associated 1##BC071963|F8A1|8263|coagulation factor VIII-associated 1##AM393473|F8A1|8263|coagulation factor VIII-associated 1##AM393736|F8A1|8263|coagulation factor VIII-associated 1##BC039693|F8A1|8263|coagulation factor VIII-associated 1##DQ896667|F8A1|8263|coagulation factor VIII-associated 1##NM_001007523|F8A2|474383|coagulation factor VIII-associated 2##NM_001007524|F8A3|474384|coagulation factor VIII-associated 3##AK313707|F8|2157|coagulation factor VIII, procoagulant component##BC111967|F8|2157|coagulation factor VIII, procoagulant component##BC111969|F8|2157|coagulation factor VIII, procoagulant component##M90707|F8|2157|coagulation factor VIII, procoagulant component##BC022513|F8|2157|coagulation factor VIII, procoagulant component##AK289947|F8|2157|coagulation factor VIII, procoagulant component##BC064380|F8|2157|coagulation factor VIII, procoagulant component##BC098389|F8|2157|coagulation factor VIII, procoagulant component##NM_019863|F8|2157|coagulation factor VIII, procoagulant component##BC130510|H2AFB3|83740|H2A histone family, member B3##BC130512|H2AFB3|83740|H2A histone family, member B3##AF254576|H2AFB3|83740|H2A histone family, member B3##NM_001017990|H2AFB1|474382|H2A histone family, member B1##NM_080720|H2AFB3|83740|H2A histone family, member B3##BC134365|H2AFB2|474381|H2A histone family, member B2##HQ258044|H2AFB3|83740|H2A histone family, member B3##BC101415|H2AFB3|83740|H2A histone family, member B3##BC101417|H2AFB3|83740|H2A histone family, member B3##BC101418|H2AFB3|83740|H2A histone family, member B3##BC128034|H2AFB1|474382|H2A histone family, member B1##CR542230|H2AFB1|474382|H2A histone family, member B1##FN811132|F8|2157|coagulation factor VIII, procoagulant component##AX746360|F8|2157|coagulation factor VIII, procoagulant component##X01179|F8|2157|coagulation factor VIII, procoagulant component##K01740|F8|2157|coagulation factor VIII, procoagulant component##AK292902|F8|2157|coagulation factor VIII, procoagulant component##M14113|F8|2157|coagulation factor VIII, procoagulant component##NM_000132|F8|2157|coagulation factor VIII, procoagulant component##AK307726|F8|2157|coagulation factor VIII, procoagulant component##NM_023934|FUNDC2|65991|FUN14 domain containing 2##AJ272054|FUNDC2|65991|FUN14 domain containing 2##BC000255|FUNDC2|65991|FUN14 domain containing 2##AF320778|FUNDC2|65991|FUN14 domain containing 2##AK313143|FUNDC2|65991|FUN14 domain containing 2##BC072685|FUNDC2|65991|FUN14 domain containing 2##BC108657|FUNDC2|65991|FUN14 domain containing 2##AM393227|FUNDC2|65991|FUN14 domain containing 2##AM393536|FUNDC2|65991|FUN14 domain containing 2##AY032594|FUNDC2|65991|FUN14 domain containing 2##AK295164|F8|2157|coagulation factor VIII, procoagulant component	0.371549	CTCF.p2:-18:0.372
chr17	46534729	46534853	reg1009313.p1	11.346	+	TSC_hg19_v1_chr17_-_46507604 BC039040	-27174	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	-27253	-	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-349639	+	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	73480	-	EU446481 BC074805 BC074806 X16665 NM_002145	87542	-	NM_002146 AK027609	117037	-	BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1##EU446481|HOXB2|3212|homeobox B2##BC074805|HOXB2|3212|homeobox B2##BC074806|HOXB2|3212|homeobox B2##X16665|HOXB2|3212|homeobox B2##NM_002145|HOXB2|3212|homeobox B2##NM_002146|HOXB3|3213|homeobox B3##AK027609|HOXB3|3213|homeobox B3	0.865339	CTCF.p2:10:0.865
chr7	127348928	127349048	reg1009666.p1	11.346	+	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	-56652	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	-56752	+	TSC_hg19_v1_chr7_+_127292198 NM_014390	-56806	+	BC111561 BC111745 AF196976 AJ297858 NM_022143 AK172751 TSC_hg19_v1_chr7_-_127671066 AK314047	322048	-	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	532345	+	CU680694 TSC_hg19_v1_chr7_-_127983862	634866	-	BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##NM_014390|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BC111561|LRRC4|64101|leucine rich repeat containing 4##BC111745|LRRC4|64101|leucine rich repeat containing 4##AF196976|LRRC4|64101|leucine rich repeat containing 4##AJ297858|LRRC4|64101|leucine rich repeat containing 4##NM_022143|LRRC4|64101|leucine rich repeat containing 4##AK172751|LRRC4|64101|leucine rich repeat containing 4##AK314047|LRRC4|64101|leucine rich repeat containing 4##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin	0.998039	CTCF.p2:-18:0.998
chr8	101553151	101553258	reg1006037.p2	11.346	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-230919	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-231023	-	AB271913 AB271914 AB029316 NM_015435	-237733	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	18736	-	AK093906 AX748361 NM_152628	108688	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	180602	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.99729	CTCF.p2:4:0.997
chr11	58939461	58939575	reg1002198.p2	11.344	+	NM_022074 NM_198847 AK291453 BC071759 AK092061 AX747338	-27239	+	TSC_hg19_v1_chr11_+_58910331 AK092237 AX747422 NM_001142519 NM_001142520 NM_001142521	-29208	+	TSC_hg19_v1_chr11_-_58910222 AK124475 BC028022	-29275	-	TSC_hg19_v1_chr11_+_58939648 NM_015177	167	+	TSC_hg19_v1_chr11_+_58940008 AB023154 AB385405	511	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	40889	-	NM_022074|FAM111A|63901|family with sequence similarity 111, member A##NM_198847|FAM111A|63901|family with sequence similarity 111, member A##AK291453|FAM111A|63901|family with sequence similarity 111, member A##BC071759|FAM111A|63901|family with sequence similarity 111, member A##AK092061|FAM111A|63901|family with sequence similarity 111, member A##AK092237|FAM111A|63901|family with sequence similarity 111, member A##NM_001142519|FAM111A|63901|family with sequence similarity 111, member A##NM_001142520|FAM111A|63901|family with sequence similarity 111, member A##NM_001142521|FAM111A|63901|family with sequence similarity 111, member A##NM_015177|DTX4|23220|deltex homolog 4 (Drosophila)##AB023154|DTX4|23220|deltex homolog 4 (Drosophila)##BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1	0.0	
chr1	186181868	186181989	reg1007585.p1	11.344	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	-478352	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-895458	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-895609	-	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	83479	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	162329	-	BC016514 TSC_hg19_v1_chr1_-_186344361	162417	-	AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)##BC016514|TPR|7175|translocated promoter region (to activated MET oncogene)	0.052166	
chr18	56161160	56161278	reg1007663.p1	11.344	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-272369	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-272416	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-272457	+	BX647796 NM_052947	134969	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	177422	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	177509	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.999774	CTCF.p2:-4:1.000
chr8	107604140	107604266	reg1008264.p1	11.344	+	AK296561 NM_001198532	-144052	+	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	-321780	+	AF119334 BC109222 BC109223 NM_012082	-1273057	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	65785	+	TSC_hg19_v1_chr8_+_107670114 AK292899 BC032710 BC019691	65912	+	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	134152	+	AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1##AK292899|OXR1|55074|oxidation resistance 1##BC032710|OXR1|55074|oxidation resistance 1##BC019691|OXR1|55074|oxidation resistance 1##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1	0.951335	CTCF.p2:-5:0.951
chr11	15096597	15096717	reg1006455.p2	11.343	+	BC008428 AK291188 BC092468 NM_000728	-1531	+	M26095 X03662 M64486 BC093753 BC101599 BC143562 BC069684 BC069704 BC069760 BC069778 NM_001033952 NM_001033953 NM_001741 X00356	-102837	-	AK054728 TSC_hg19_v1_chr11_+_14926557	-170108	+	AB236159 NM_001031853	37312	+	AB236158 NM_001042536	39826	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	1327744	-	BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##M26095|CALCA|796|calcitonin-related polypeptide alpha##X03662|CALCA|796|calcitonin-related polypeptide alpha##M64486|CALCA|796|calcitonin-related polypeptide alpha##BC093753|CALCA|796|calcitonin-related polypeptide alpha##BC101599|CALCA|796|calcitonin-related polypeptide alpha##BC143562|CALCA|796|calcitonin-related polypeptide alpha##BC069684|CALCA|796|calcitonin-related polypeptide alpha##BC069704|CALCA|796|calcitonin-related polypeptide alpha##BC069760|CALCA|796|calcitonin-related polypeptide alpha##BC069778|CALCA|796|calcitonin-related polypeptide alpha##NM_001033952|CALCA|796|calcitonin-related polypeptide alpha##NM_001033953|CALCA|796|calcitonin-related polypeptide alpha##NM_001741|CALCA|796|calcitonin-related polypeptide alpha##X00356|CALCA|796|calcitonin-related polypeptide alpha##AK054728|CALCB|797|calcitonin-related polypeptide beta##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6	0.763334	CTCF.p2:8:0.763
chr12	49390635	49390755	reg1009202.p1	11.343	+	NM_005430	-18460	+	U81787 NM_003394 AK312906	-25097	-	TSC_hg19_v1_chr12_-_49351310 M74491	-39391	-	AB527129 AB018292 BC136398 BC136399 TSC_hg19_v1_chr12_-_49393076 NM_015086 BC039264	2305	-	TSC_hg19_v1_chr12_-_49412538 AK293332 NM_001206710 AK303276 AK307994 AK310250 BC000358 AK097606 NM_001206709 NM_002733	21876	-	AF010403 NM_003482	58411	-	NM_005430|WNT1|7471|wingless-type MMTV integration site family, member 1##U81787|WNT10B|7480|wingless-type MMTV integration site family, member 10B##NM_003394|WNT10B|7480|wingless-type MMTV integration site family, member 10B##AK312906|WNT10B|7480|wingless-type MMTV integration site family, member 10B##M74491|ARF3|377|ADP-ribosylation factor 3##AB018292|DDN|23109|dendrin##BC136398|DDN|23109|dendrin##BC136399|DDN|23109|dendrin##NM_015086|DDN|23109|dendrin##BC039264|DDN|23109|dendrin##AK293332|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206710|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK303276|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK307994|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK310250|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##BC000358|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK097606|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206709|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_002733|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2	0.20703	CTCF.p2:8:0.207
chr4	74312189	74312331	reg1010058.p1	11.343	+	NM_001134 V01514 AK297669 TSC_hg19_v1_chr4_+_74301937 AK297674 AK314817 BC027881 DQ890942 DQ894103 CU693306	-10305	+	X51365 X51363 X51364 TSC_hg19_v1_chr4_+_74286879	-25398	+	TSC_hg19_v1_chr4_+_74281884 BC014308	-30315	+	AK290556 NM_001133 BC109020 BC109021 L35486	35210	+	AY217664 BC058835 NM_177532 AY217665 CR749283 AK126346 NM_201431	173959	-	NM_000584 Y00787 AK131067 AK311874 M17017 M26383 BC013615 AF043337 AB590232 DQ890564 DQ893727 BT007067 CR542151 Z11686	294038	+	NM_001134|AFP|174|alpha-fetoprotein##V01514|AFP|174|alpha-fetoprotein##AK297669|AFP|174|alpha-fetoprotein##AK297674|AFP|174|alpha-fetoprotein##AK314817|AFP|174|alpha-fetoprotein##BC027881|AFP|174|alpha-fetoprotein##DQ890942|AFP|174|alpha-fetoprotein##DQ894103|AFP|174|alpha-fetoprotein##X51365|ALB|213|albumin##X51363|ALB|213|albumin##X51364|ALB|213|albumin##BC014308|ALB|213|albumin##AK290556|AFM|173|afamin##NM_001133|AFM|173|afamin##BC109020|AFM|173|afamin##BC109021|AFM|173|afamin##L35486|AFM|173|afamin##AY217664|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##BC058835|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_177532|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AY217665|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##CR749283|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK126346|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_201431|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_000584|IL8|3576|interleukin 8##Y00787|IL8|3576|interleukin 8##AK131067|IL8|3576|interleukin 8##AK311874|IL8|3576|interleukin 8##M17017|IL8|3576|interleukin 8##M26383|IL8|3576|interleukin 8##BC013615|IL8|3576|interleukin 8##DQ890564|IL8|3576|interleukin 8##DQ893727|IL8|3576|interleukin 8##BT007067|IL8|3576|interleukin 8##CR542151|IL8|3576|interleukin 8##Z11686|IL8|3576|interleukin 8	0.784847	CTCF.p2:13:0.785
chr9	998819	998999	reg1002237.p2	11.343	+	AF193873 TSC_hg19_v1_chr9_+_977425	-21504	+	NM_021240 BC113584 BC117245	-21944	+	AF130728 AY442914 AY442915 NM_021951 AK313594 AJ276801 AL162131 BC040847 EU446468 AB463577 CU691924	-157146	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	51435	+	TSC_hg19_v1_chr9_+_1050370 Y19052	51461	+	AF130729 NM_181872	51700	+	AF193873|DMRT3|58524|doublesex and mab-3 related transcription factor 3##NM_021240|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC113584|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC117245|DMRT3|58524|doublesex and mab-3 related transcription factor 3##AF130728|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442914|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442915|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021951|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AK313594|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AJ276801|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AL162131|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BC040847|DMRT1|1761|doublesex and mab-3 related transcription factor 1##EU446468|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2	1.997858	CTCF.p2:-17:0.999	CTCF.p2:80:0.999
chr11	116562512	116562645	reg1007475.p1	11.342	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-1187398	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-1473930	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-2013330	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	81120	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	96137	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	96160	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.977913	CTCF.p2:14:0.978
chr13	40643450	40643584	reg1008086.p1	11.342	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-413656	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-466155	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-466190	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	597195	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	701775	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	701815	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.76922	CTCF.p2:0:0.769
chr17	46802019	46802139	reg1009663.p1	11.342	+	BC030950 AF331165 NM_032391	-2199	-	AK056123 AB464577 AK315480 BC015565 AK056414 NM_024017 TSC_hg19_v1_chr17_-_46703952	-98291	-	AK096222 NM_024016	-109779	-	BT007410 AB464574 DQ893517 DQ896496 U57052 BC007092 BC070233 AK313266 AK225234 NM_006361 AY937237	3957	-	CU689652 BC033563 NM_173623 AK310321	69566	-	AK097392 AK302952 BC041368 AL834151 NM_001130918	92345	-	BC030950|PRAC|84366|prostate cancer susceptibility candidate##AF331165|PRAC|84366|prostate cancer susceptibility candidate##NM_032391|PRAC|84366|prostate cancer susceptibility candidate##AK056123|HOXB9|3219|homeobox B9##AK315480|HOXB9|3219|homeobox B9##BC015565|HOXB9|3219|homeobox B9##AK056414|HOXB9|3219|homeobox B9##NM_024017|HOXB9|3219|homeobox B9##AK096222|HOXB8|3218|homeobox B8##NM_024016|HOXB8|3218|homeobox B8##BT007410|HOXB13|10481|homeobox B13##DQ893517|HOXB13|10481|homeobox B13##DQ896496|HOXB13|10481|homeobox B13##U57052|HOXB13|10481|homeobox B13##BC007092|HOXB13|10481|homeobox B13##BC070233|HOXB13|10481|homeobox B13##AK313266|HOXB13|10481|homeobox B13##AK225234|HOXB13|10481|homeobox B13##NM_006361|HOXB13|10481|homeobox B13##AY937237|HOXB13|10481|homeobox B13##BC033563|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_173623|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK310321|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK097392|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK302952|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC041368|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AL834151|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_001130918|TTLL6|284076|tubulin tyrosine ligase-like family, member 6	0.614279	CTCF.p2:-19:0.614
chr3	13692064	13692188	reg1008701.p1	11.342	+	AK304827 NM_001165035	-81887	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	-101463	+	AK129883 NM_001004019 NM_001998 TSC_hg19_v1_chr3_+_13590624	-101501	+	BC008811 NM_004625	229491	-	TSC_hg19_v1_chr3_-_14166228 BC017082	474107	-	TSC_hg19_v1_chr3_-_14166250 BC033775	474124	-	AK304827|FBLN2|2199|fibulin 2##NM_001165035|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2##AK129883|FBLN2|2199|fibulin 2##NM_001004019|FBLN2|2199|fibulin 2##NM_001998|FBLN2|2199|fibulin 2##BC008811|WNT7A|7476|wingless-type MMTV integration site family, member 7A##NM_004625|WNT7A|7476|wingless-type MMTV integration site family, member 7A##BC017082|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##BC033775|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4	0.694888	CTCF.p2:11:0.695
chr11	58421600	58421714	reg1008368.p1	11.341	+	BC069167 NM_000614 BC068030 AK314118 BC074963 BC074964 CU686605 S72921	-31472	+	TSC_hg19_v1_chr11_+_58346697 AB056107 AB057443 CU690828	-74962	+	TSC_hg19_v1_chr11_+_58346591 BC051743 NM_001197051 NM_053023	-75074	+	AF023466 BC009785 NM_005838 NM_201648	77750	-	BC021682 NM_145016 BC016789	190331	-	NM_001220494 AK300479 BC008353	273480	+	BC069167|CNTF|1270|ciliary neurotrophic factor##NM_000614|CNTF|1270|ciliary neurotrophic factor##BC068030|CNTF|1270|ciliary neurotrophic factor##AK314118|CNTF|1270|ciliary neurotrophic factor##BC074963|CNTF|1270|ciliary neurotrophic factor##BC074964|CNTF|1270|ciliary neurotrophic factor##S72921|CNTF|1270|ciliary neurotrophic factor##AB056107|ZFP91|80829|zinc finger protein 91 homolog (mouse)##AB057443|ZFP91-CNTF|386607|ZFP91-CNTF readthrough##BC051743|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_001197051|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_053023|ZFP91|80829|zinc finger protein 91 homolog (mouse)##AF023466|GLYAT|10249|glycine-N-acyltransferase##BC009785|GLYAT|10249|glycine-N-acyltransferase##NM_005838|GLYAT|10249|glycine-N-acyltransferase##NM_201648|GLYAT|10249|glycine-N-acyltransferase##BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1	0.999513	CTCF.p2:-4:1.000
chr17	29046428	29046567	reg1009921.p1	11.341	+	BC096718 BC098126 BC098273 NM_015594	-159914	+	TSC_hg19_v1_chr17_+_28804434 AK000606 AK291381 NM_001007024 NM_001007025 NM_004871 AK298714 AF047438 BC012620 AF073926 BC040471	-242064	+	AK316409 NM_001199775 AK302878	-338982	+	TSC_hg19_v1_chr17_+_29058664 BC047718	12191	+	TSC_hg19_v1_chr17_-_29151711 DQ298450 DQ892276 CU692798 AK296238 AF046059 BC023567	105178	-	TSC_hg19_v1_chr17_-_29151725 AK313315 NM_015986	105266	-	BC096718|TBC1D29|26083|TBC1 domain family, member 29##BC098126|TBC1D29|26083|TBC1 domain family, member 29##BC098273|TBC1D29|26083|TBC1 domain family, member 29##NM_015594|TBC1D29|26083|TBC1 domain family, member 29##AK000606|GOSR1|9527|golgi SNAP receptor complex member 1##AK291381|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1##NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1##AK298714|GOSR1|9527|golgi SNAP receptor complex member 1##AF047438|GOSR1|9527|golgi SNAP receptor complex member 1##BC012620|GOSR1|9527|golgi SNAP receptor complex member 1##AF073926|GOSR1|9527|golgi SNAP receptor complex member 1##BC040471|GOSR1|9527|golgi SNAP receptor complex member 1##AK316409|CPD|1362|carboxypeptidase D##NM_001199775|CPD|1362|carboxypeptidase D##AK302878|CPD|1362|carboxypeptidase D##BC047718|SUZ12P|440423|suppressor of zeste 12 homolog pseudogene##DQ298450|CRLF3|51379|cytokine receptor-like factor 3##DQ892276|CRLF3|51379|cytokine receptor-like factor 3##AK296238|CRLF3|51379|cytokine receptor-like factor 3##AF046059|CRLF3|51379|cytokine receptor-like factor 3##BC023567|CRLF3|51379|cytokine receptor-like factor 3##AK313315|CRLF3|51379|cytokine receptor-like factor 3##NM_015986|CRLF3|51379|cytokine receptor-like factor 3	0.999226	CTCF.p2:11:0.999
chr10	117177311	117177422	reg1009085.p1	11.340	+	TSC_hg19_v1_chr10_+_116853123 BC029592 BC035157 NM_207303 BC139916 BC139923 BC047716	-324218	+	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	-479403	+	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	-595817	+	AB590245 DQ892210 DQ895406 AF042080 U95847 U97144 BC014962 NM_145793	854314	-	AK292886 NM_001145453	855390	-	AF038421 NM_005264 TSC_hg19_v1_chr10_-_118033147	855702	-	BC029592|ATRNL1|26033|attractin-like 1##BC035157|ATRNL1|26033|attractin-like 1##NM_207303|ATRNL1|26033|attractin-like 1##BC139916|ATRNL1|26033|attractin-like 1##BC139923|ATRNL1|26033|attractin-like 1##BC047716|ATRNL1|26033|attractin-like 1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##DQ892210|GFRA1|2674|GDNF family receptor alpha 1##DQ895406|GFRA1|2674|GDNF family receptor alpha 1##AF042080|GFRA1|2674|GDNF family receptor alpha 1##U95847|GFRA1|2674|GDNF family receptor alpha 1##U97144|GFRA1|2674|GDNF family receptor alpha 1##BC014962|GFRA1|2674|GDNF family receptor alpha 1##NM_145793|GFRA1|2674|GDNF family receptor alpha 1##AK292886|GFRA1|2674|GDNF family receptor alpha 1##NM_001145453|GFRA1|2674|GDNF family receptor alpha 1##AF038421|GFRA1|2674|GDNF family receptor alpha 1##NM_005264|GFRA1|2674|GDNF family receptor alpha 1	0.982237	CTCF.p2:-1:0.982
chr2	135223872	135223983	reg1008405.p2	11.339	+	NM_002410 D17716 AF113921	-212042	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-897889	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-1044573	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	252629	-	AK125008 NM_138326 BC016018 BC107420 AB071418	372291	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	452470	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.983813	CTCF.p2:-10:0.724	CTCF.p2:-11:0.260
chr12	11734244	11734386	reg1007303.p1	11.338	+	BC044827 NM_006248	-185824	-	BC044827 K03205 K03206 BC141917 K03204 NM_005039 NM_199353 NM_199354 AX772842	-225799	-	BC130386 BC035362 K03207 NM_002723 BC128191	-270955	-	TSC_hg19_v1_chr12_+_11802659 AK289441	68358	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	68459	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	68671	+	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2##BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##K03205|PRB1|5542|proline-rich protein BstNI subfamily 1##K03206|PRB1|5542|proline-rich protein BstNI subfamily 1##BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1##K03204|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1##BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4##BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4##K03207|PRB4|5545|proline-rich protein BstNI subfamily 4##NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4##BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4##AK289441|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6	0.999604	CTCF.p2:-19:1.000
chr2	111141087	111141199	reg1008153.p1	11.338	+	TSC_hg19_v1_chr2_-_110970123 BC031315	-171022	-	AJ001815 BC032939 TSC_hg19_v1_chr2_-_110962582 BX571745 NM_000272 NM_001128178 NM_001128179 NM_207181	-178536	-	AF023674 CU679489 BC062574 TSC_hg19_v1_chr2_-_110962561 BC009789 AK299011 AK225600 AK307654	-178588	-	BC094740 NM_001205288 NM_033514	89508	-	NM_005054 U64675	193534	-	AL136868 NM_001037866 NM_001123363 NM_032260	195165	-	BC031315|LINC00116|205251|long intergenic non-protein coding RNA 116##AJ001815|NPHP1|4867|nephronophthisis 1 (juvenile)##BC032939|NPHP1|4867|nephronophthisis 1 (juvenile)##BX571745|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_000272|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128178|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128179|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_207181|NPHP1|4867|nephronophthisis 1 (juvenile)##AF023674|NPHP1|4867|nephronophthisis 1 (juvenile)##BC062574|NPHP1|4867|nephronophthisis 1 (juvenile)##BC009789|NPHP1|4867|nephronophthisis 1 (juvenile)##AK299011|NPHP1|4867|nephronophthisis 1 (juvenile)##AK225600|NPHP1|4867|nephronophthisis 1 (juvenile)##AK307654|NPHP1|4867|nephronophthisis 1 (juvenile)##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5	0.99755	CTCF.p2:12:0.998
chr3	112012283	112012430	reg1011042.p1	11.338	+	CU688884 BC030506 AY212246 AK313368 AK128276 AF521911 NM_001190259 NM_001190260 NM_152785	-160297	-	TSC_hg19_v1_chr3_+_111805267 AK303588 NM_001171747 NM_024616 AY830714 AK026839 BC017064 AK298076	-207128	+	AK131211 NM_001042575 BC117322	-253848	+	BC044801 NM_183061 AK128084	732	-	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	39602	+	AL832529 AK129797 AK293399 BC031103 TSC_hg19_v1_chr3_+_112052024 AK074972	39668	+	BC030506|GCET2|257144|germinal center expressed transcript 2##AY212246|GCET2|257144|germinal center expressed transcript 2##AK313368|GCET2|257144|germinal center expressed transcript 2##AF521911|GCET2|257144|germinal center expressed transcript 2##NM_001190259|GCET2|257144|germinal center expressed transcript 2##NM_001190260|GCET2|257144|germinal center expressed transcript 2##NM_152785|GCET2|257144|germinal center expressed transcript 2##AK303588|C3orf52|79669|chromosome 3 open reading frame 52##NM_001171747|C3orf52|79669|chromosome 3 open reading frame 52##NM_024616|C3orf52|79669|chromosome 3 open reading frame 52##AY830714|C3orf52|79669|chromosome 3 open reading frame 52##AK026839|C3orf52|79669|chromosome 3 open reading frame 52##BC017064|C3orf52|79669|chromosome 3 open reading frame 52##AK298076|C3orf52|79669|chromosome 3 open reading frame 52##AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7##BC044801|SLC9A10|285335|solute carrier family 9, member 10##NM_183061|SLC9A10|285335|solute carrier family 9, member 10##AK128084|SLC9A10|285335|solute carrier family 9, member 10##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule##AL832529|CD200|4345|CD200 molecule##AK129797|CD200|4345|CD200 molecule##AK293399|CD200|4345|CD200 molecule##BC031103|CD200|4345|CD200 molecule##AK074972|CD200|4345|CD200 molecule	0.941147	CTCF.p2:12:0.941
chr2	65058957	65059106	reg1008510.p2	11.337	+	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-177984	-	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-178182	-	TSC_hg19_v1_chr2_+_64751580 AL833962	-307429	+	TSC_hg19_v1_chr2_-_65090764 AK097952	31710	-	TSC_hg19_v1_chr2_-_65159574 BC037562	100546	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	156569	+	D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##AL833962|AFTPH|54812|aftiphilin##BC037562|LOC400958|400958|uncharacterized LOC400958##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.935028	CTCF.p2:16:0.935
chr15	30554416	30554514	reg1006965.p1	11.336	+	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-439842	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-440123	-	NM_015307	-691539	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	131247	-	TSC_hg19_v1_chr15_+_30918372 BC071990	363921	+	BC105788 NM_001039841	364413	+	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B	0.999849	CTCF.p2:-3:1.000
chr3	185486405	185486513	reg1008613.p2	11.336	+	AK304402 TSC_hg19_v1_chr3_+_185304106 AF151697 NM_021627 AK296772 AK027599 AK296744 BC040609 CU691906 AB037752 AB385449 AL834380	-182376	+	CU687970 TSC_hg19_v1_chr3_-_185270374 AK298380 AY036912 AY093498 EF186228 EF186229 BC064941 AK122651 NM_139248	-216131	-	TSC_hg19_v1_chr3_-_185216824 EU831805 EU831882 AK313954 BC019884 BC008043 BX647928 AY358547 AK172748 AK290878 NM_080652	-269760	-	CU676908 DQ892161 EU176689 TSC_hg19_v1_chr3_-_185542803 AK309611 AF117107 BC012322	56315	-	TSC_hg19_v1_chr3_-_185542828 BC021290 AK290664 NM_001007225 NM_006548	56372	-	AK091863 TSC_hg19_v1_chr3_-_185641735	155206	-	AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK298380|LIPH|200879|lipase, member H##AY036912|LIPH|200879|lipase, member H##AY093498|LIPH|200879|lipase, member H##EF186228|LIPH|200879|lipase, member H##EF186229|LIPH|200879|lipase, member H##BC064941|LIPH|200879|lipase, member H##AK122651|LIPH|200879|lipase, member H##NM_139248|LIPH|200879|lipase, member H##EU831805|TMEM41A|90407|transmembrane protein 41A##EU831882|TMEM41A|90407|transmembrane protein 41A##AK313954|TMEM41A|90407|transmembrane protein 41A##BC019884|TMEM41A|90407|transmembrane protein 41A##BC008043|TMEM41A|90407|transmembrane protein 41A##BX647928|TMEM41A|90407|transmembrane protein 41A##AY358547|TMEM41A|90407|transmembrane protein 41A##AK172748|TMEM41A|90407|transmembrane protein 41A##AK290878|TMEM41A|90407|transmembrane protein 41A##NM_080652|TMEM41A|90407|transmembrane protein 41A##DQ892161|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##EU176689|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK309611|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AF117107|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##BC021290|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK290664|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##NM_001007225|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##NM_006548|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK091863|TRA2B|6434|transformer 2 beta homolog (Drosophila)	0.999158	CTCF.p2:3:0.999
chr7	132003630	132003739	reg1008602.p1	11.336	+	TSC_hg19_v1_chr7_-_131833385 AL834504	-170289	-	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	-762321	-	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-991045	+	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	189236	-	AK123428 TSC_hg19_v1_chr7_-_132261230	257546	-	TSC_hg19_v1_chr7_-_132261268 NM_001105543 NM_020911	257611	-	AL834504|PLXNA4|91584|plexin A4##BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4##AK123428|PLXNA4|91584|plexin A4##NM_001105543|PLXNA4|91584|plexin A4##NM_020911|PLXNA4|91584|plexin A4	0.999512	CTCF.p2:0:1.000
chr7	6036975	6037106	reg1008418.p2	11.336	+	AK314983 BC034495 NM_001099697 NM_173565	-26727	-	BC067810 NM_015622 BC132749 BC132751 AK292326 BC010130 CU679629	-98660	+	BC147028 BC147029 BC113704 BC113706 NM_001097622 CU686830 BC069468 BC069512 BC069550 HQ258718	-116567	+	AB103082 AB103083 AB103085 AB103087 AB587472 U14658 BX537558 TSC_hg19_v1_chr7_-_6048681 BC093921 BC143397 AK312390 BC008400 BC031832 AK294661 NM_000535	11652	-	TSC_hg19_v1_chr7_+_6048883 AK313037 NM_006303 U24169	11832	+	TSC_hg19_v1_chr7_+_6048905 BC013630	11867	+	AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_015622|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC147028|OCM|654231|oncomodulin##BC147029|OCM|654231|oncomodulin##BC113704|OCM|654231|oncomodulin##BC113706|OCM|654231|oncomodulin##NM_001097622|OCM|654231|oncomodulin##BC069468|OCM|654231|oncomodulin##BC069512|OCM|654231|oncomodulin##BC069550|OCM|654231|oncomodulin##HQ258718|OCM|654231|oncomodulin##AB103082|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##AB103083|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##AB103085|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##U14658|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##BX537558|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##BC093921|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##BC143397|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##AK312390|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##BC008400|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##BC031832|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##AK294661|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##NM_000535|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##AK313037|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2##NM_006303|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2##U24169|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2##BC013630|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	0.668026	CTCF.p2:-20:0.668
chr15	29394549	29394651	reg1008816.p1	11.335	+	NM_001130414 NM_005503 AF047348 BC082986	-180751	+	TSC_hg19_v1_chr15_+_29077475 BC018626	-317118	+	TSC_hg19_v1_chr15_+_29033278 AK302529	-361277	+	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	167370	-	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	167429	-	NM_015307	468326	-	NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1	0.998693	CTCF.p2:10:0.999
chr1	160070897	160071028	reg1007535.p1	11.334	+	AK308115 NM_001206665 TSC_hg19_v1_chr1_-_160068754	-2274	-	TSC_hg19_v1_chr1_-_160068411 AF407274 AK055843 BC053881 NM_052868	-2547	-	AB590475 TSC_hg19_v1_chr1_-_160068277 AY157579 AF311906 AY044845	-2665	-	NM_000702 AK124581 AK091617 AK225127 AK295048 AK314296 TSC_hg19_v1_chr1_+_160085548 BC047533 AB018321 BC052271	14581	+	NM_144699 AF506797 BC068570 BC036052 BX647234 AL833335 AK308286 BC094801	50413	+	BC028297 NM_001001734	76238	+	AK308115|IGSF8|93185|immunoglobulin superfamily, member 8##NM_001206665|IGSF8|93185|immunoglobulin superfamily, member 8##AF407274|IGSF8|93185|immunoglobulin superfamily, member 8##AK055843|IGSF8|93185|immunoglobulin superfamily, member 8##BC053881|IGSF8|93185|immunoglobulin superfamily, member 8##NM_052868|IGSF8|93185|immunoglobulin superfamily, member 8##AY157579|IGSF8|93185|immunoglobulin superfamily, member 8##AF311906|IGSF8|93185|immunoglobulin superfamily, member 8##AY044845|IGSF8|93185|immunoglobulin superfamily, member 8##NM_000702|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK124581|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK091617|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK295048|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK314296|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##BC047533|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AB018321|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##BC052271|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##NM_144699|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AF506797|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC068570|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC036052|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BX647234|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AL833335|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AK308286|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC094801|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC028297|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##NM_001001734|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide	0.996013	CTCF.p2:-10:0.996
chr1	240139797	240139910	reg1009200.p1	11.334	+	AF279779 NM_000740	-347481	+	TSC_hg19_v1_chr1_+_239550016 AK056349	-589911	+	AK314151 NM_021186	-2085632	-	TSC_hg19_v1_chr1_+_240255182 NM_020066	115324	+	BC046632 TSC_hg19_v1_chr1_-_240775431	635556	-	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	635601	-	AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##NM_020066|FMN2|56776|formin 2##BC046632|GREM2|64388|gremlin 2##AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2	0.999902	CTCF.p2:-8:1.000
chr5	14270430	14270574	reg1009390.p1	11.334	+	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	-126830	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-258632	-	AX800026 AY045575 NM_001369	-325914	-	TSC_hg19_v1_chr5_+_14488527 AK131423	218037	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	311398	+	TSC_hg19_v1_chr5_+_14581949 AK001989 BC011524 CU679940	311462	+	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A##AK001989|FAM105A|54491|family with sequence similarity 105, member A##BC011524|FAM105A|54491|family with sequence similarity 105, member A	0.558419	CTCF.p2:15:0.558
chr3	27722777	27722933	reg1010051.p1	11.333	+	TSC_hg19_v1_chr3_-_27525893 AK309734	-196925	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	-197030	-	AF047033 AF089726 NM_003615	-224611	-	AB031038 BC131712 NM_005442 AB463608 BC037568	40938	-	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	41346	-	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	560243	+	AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)	0.994187	CTCF.p2:10:0.994
chr21	33238480	33238627	reg1011337.p1	11.332	+	TSC_hg19_v1_chr21_-_33104407 BC014921 NM_001145444 NM_001145445 NM_020706	-134117	-	BC043353 TSC_hg19_v1_chr21_-_33104396	-134160	-	AL834304 BC052286 BC064990 TSC_hg19_v1_chr21_-_33104271 AK057840 AK308406	-134281	-	TSC_hg19_v1_chr21_+_33245863 AJ271722 NM_014586	7167	+	CU692128 TSC_hg19_v1_chr21_-_33651338 AF387845 AF231921 AK075281 BC042917 NM_018944 AK312073	412842	-	AF454915 AF454916 NM_178817 NM_206898	425570	+	BC014921|SCAF4|57466|SR-related CTD-associated factor 4##NM_001145444|SCAF4|57466|SR-related CTD-associated factor 4##NM_001145445|SCAF4|57466|SR-related CTD-associated factor 4##NM_020706|SCAF4|57466|SR-related CTD-associated factor 4##BC043353|SCAF4|57466|SR-related CTD-associated factor 4##AL834304|SCAF4|57466|SR-related CTD-associated factor 4##BC052286|SCAF4|57466|SR-related CTD-associated factor 4##BC064990|SCAF4|57466|SR-related CTD-associated factor 4##AK057840|SCAF4|57466|SR-related CTD-associated factor 4##AK308406|SCAF4|57466|SR-related CTD-associated factor 4##AJ271722|HUNK|30811|hormonally up-regulated Neu-associated kinase##NM_014586|HUNK|30811|hormonally up-regulated Neu-associated kinase##AF387845|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AF231921|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AK075281|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##BC042917|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##NM_018944|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AK312073|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AF454915|MRAP|56246|melanocortin 2 receptor accessory protein##AF454916|MRAP|56246|melanocortin 2 receptor accessory protein##NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein##NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein	0.999829	CTCF.p2:-16:1.000
chr9	102773467	102773588	reg1008526.p2	11.332	+	TSC_hg19_v1_chr9_+_102677458 BC101564 BC101566 BC143430 BC039048	-96067	+	TSC_hg19_v1_chr9_+_102668954 BC111009 AK000658 BC070269 AK095262 AL833620	-104526	+	AK311412 TSC_hg19_v1_chr9_+_102668952	-104575	+	AB383909 AJ344330 TSC_hg19_v1_chr9_-_102861281 AB011145 AY359048 BX648519	87675	-	TSC_hg19_v1_chr9_-_102861295 BC005374	87766	-	TSC_hg19_v1_chr9_-_102861305 AK075024 NM_015051	87794	-	BC101564|STX17|55014|syntaxin 17##BC101566|STX17|55014|syntaxin 17##BC143430|STX17|55014|syntaxin 17##BC111009|STX17|55014|syntaxin 17##AK000658|STX17|55014|syntaxin 17##BC070269|STX17|55014|syntaxin 17##AK095262|STX17|55014|syntaxin 17##AL833620|STX17|55014|syntaxin 17##AK311412|STX17|55014|syntaxin 17##AJ344330|ERP44|23071|endoplasmic reticulum protein 44##AB011145|ERP44|23071|endoplasmic reticulum protein 44##AY359048|ERP44|23071|endoplasmic reticulum protein 44##BX648519|ERP44|23071|endoplasmic reticulum protein 44##BC005374|ERP44|23071|endoplasmic reticulum protein 44##AK075024|ERP44|23071|endoplasmic reticulum protein 44##NM_015051|ERP44|23071|endoplasmic reticulum protein 44	0.986153	CTCF.p2:13:0.986
chr18	72885176	72885287	reg1007300.p2	11.331	+	NM_001146189 NM_001146190 NM_017757	-542313	+	TSC_hg19_v1_chr18_+_72265126 AK056288	-620100	+	TSC_hg19_v1_chr18_-_72265072 BC036588	-620171	-	TSC_hg19_v1_chr18_-_72920993 CU687330 CU689738	35770	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	35881	-	BC018081 NM_175907 TSC_hg19_v1_chr18_-_72921324	36074	-	NM_001146189|ZNF407|55628|zinc finger protein 407##NM_001146190|ZNF407|55628|zinc finger protein 407##NM_017757|ZNF407|55628|zinc finger protein 407##AK056288|ZNF407|55628|zinc finger protein 407##BC036588|LOC400657|400657|uncharacterized LOC400657##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	0.0	
chr3	129102246	129102377	reg1009281.p1	11.331	+	TSC_hg19_v1_chr3_-_129035130 BC000426 NM_006026	-67211	-	TSC_hg19_v1_chr3_+_128997745 BC010125 BC050686 NM_001006109 BC009993	-104499	+	TSC_hg19_v1_chr3_+_128997674 AF201934 NM_020187 BC088363 AK297501 AK309891 AK225264	-104649	+	TSC_hg19_v1_chr3_-_129118263 BC053996 AK093477	15952	-	CU688234 AK127968 BC031104 BC066975 NM_207307	45101	-	AM180876 CR450305 CU680042 BC034463 U56254 U56428 TSC_hg19_v1_chr3_-_129158722 BC011752	56407	-	BC000426|H1FX|8971|H1 histone family, member X##NM_006026|H1FX|8971|H1 histone family, member X##BC010125|C3orf37|56941|chromosome 3 open reading frame 37##BC050686|C3orf37|56941|chromosome 3 open reading frame 37##NM_001006109|C3orf37|56941|chromosome 3 open reading frame 37##BC009993|C3orf37|56941|chromosome 3 open reading frame 37##AF201934|C3orf37|56941|chromosome 3 open reading frame 37##NM_020187|C3orf37|56941|chromosome 3 open reading frame 37##BC088363|C3orf37|56941|chromosome 3 open reading frame 37##AK297501|C3orf37|56941|chromosome 3 open reading frame 37##AK309891|C3orf37|56941|chromosome 3 open reading frame 37##AK225264|C3orf37|56941|chromosome 3 open reading frame 37##BC053996|RPL32P3|132241|ribosomal protein L32 pseudogene 3##AK093477|RPL32P3|132241|ribosomal protein L32 pseudogene 3##AK127968|C3orf25|90288|chromosome 3 open reading frame 25##BC031104|C3orf25|90288|chromosome 3 open reading frame 25##BC066975|C3orf25|90288|chromosome 3 open reading frame 25##NM_207307|C3orf25|90288|chromosome 3 open reading frame 25##AM180876|MBD4|8930|methyl-CpG binding domain protein 4##CR450305|MBD4|8930|methyl-CpG binding domain protein 4##BC034463|MBD4|8930|methyl-CpG binding domain protein 4##BC011752|MBD4|8930|methyl-CpG binding domain protein 4	1.173015	CTCF.p2:-7:0.989
chr5	135313230	135313363	reg1008855.p1	11.331	+	AB590696 BC093670 BC101579 AK314092 D63521 NM_002302	-22675	-	TSC_hg19_v1_chr5_+_135266044 NM_012159 BC044938	-47256	+	CU688130 BC066283 BC066284 BC066285 BC066286 BC066287 M30134 NM_000590 S63356 X17543	-81787	-	NM_000358 TSC_hg19_v1_chr5_+_135364679 AK094581 AK094055 AK222833 AK298603 AK093916 AK303643 BC026352 BC000097 BC004972 M77349	51348	+	TSC_hg19_v1_chr5_+_135364731 AB590111 DQ892178 EU176690 CU678832 BT009820	51438	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	155233	+	BC093670|LECT2|3950|leukocyte cell-derived chemotaxin 2##BC101579|LECT2|3950|leukocyte cell-derived chemotaxin 2##AK314092|LECT2|3950|leukocyte cell-derived chemotaxin 2##D63521|LECT2|3950|leukocyte cell-derived chemotaxin 2##NM_002302|LECT2|3950|leukocyte cell-derived chemotaxin 2##NM_012159|FBXL21|26223|F-box and leucine-rich repeat protein 21 (gene/pseudogene)##BC044938|FBXL21|26223|F-box and leucine-rich repeat protein 21 (gene/pseudogene)##BC066283|IL9|3578|interleukin 9##BC066284|IL9|3578|interleukin 9##BC066285|IL9|3578|interleukin 9##BC066286|IL9|3578|interleukin 9##BC066287|IL9|3578|interleukin 9##M30134|IL9|3578|interleukin 9##NM_000590|IL9|3578|interleukin 9##S63356|IL9|3578|interleukin 9##X17543|IL9|3578|interleukin 9##NM_000358|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK094581|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK094055|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK222833|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK298603|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK093916|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK303643|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC026352|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC000097|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC004972|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##M77349|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##DQ892178|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##EU176690|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BT009820|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5	0.074969	
chr11	13977551	13977674	reg1009296.p1	11.329	+	AY423606 BC017377 TSC_hg19_v1_chr11_+_13690267 AY600449	-287345	+	TSC_hg19_v1_chr11_+_13690255 AK315527 AK026381	-287359	+	CR936619 TSC_hg19_v1_chr11_+_13690235	-287375	+	TSC_hg19_v1_chr11_+_13984277 NM_006108 AK291780 AK074803 BC136513 BC136563 BC006262 AB051390	6671	+	AK309550 AK309683 NM_001177315 NM_001102669	402439	-	TSC_hg19_v1_chr11_-_14380730 BC013106 AK299606 AK313976 NM_012250	403065	-	AY423606|FAR1|84188|fatty acyl CoA reductase 1##BC017377|FAR1|84188|fatty acyl CoA reductase 1##AY600449|FAR1|84188|fatty acyl CoA reductase 1##AK315527|FAR1|84188|fatty acyl CoA reductase 1##AK026381|FAR1|84188|fatty acyl CoA reductase 1##CR936619|FAR1|84188|fatty acyl CoA reductase 1##NM_006108|SPON1|10418|spondin 1, extracellular matrix protein##AK291780|SPON1|10418|spondin 1, extracellular matrix protein##AK074803|SPON1|10418|spondin 1, extracellular matrix protein##BC136513|SPON1|10418|spondin 1, extracellular matrix protein##BC136563|SPON1|10418|spondin 1, extracellular matrix protein##AB051390|SPON1|10418|spondin 1, extracellular matrix protein##AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##BC013106|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK299606|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK313976|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_012250|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	0.996593	CTCF.p2:0:0.997
chr17	26578781	26578899	reg1008219.p2	11.329	+	AB384832 AK024686 TSC_hg19_v1_chr17_+_26370066	-208839	+	TSC_hg19_v1_chr17_+_26369661 AK315315 AF197898 NM_016231 AF180819	-209187	+	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	-358449	-	NM_014573 TSC_hg19_v1_chr17_+_26646214 L19183 AK299511 AK307678 BC017362 BC091504 AK293331	67353	+	TSC_hg19_v1_chr17_-_26662482 AY224601 BC038094 AK297769 BC002640 NM_174887 AK309232	83646	-	NM_021137 TSC_hg19_v1_chr17_+_26662786 BC003694 AK300584 AK312387 BC001643 BC001949 BC006208 M80783	83863	+	AK024686|NLK|51701|nemo-like kinase##AK315315|NLK|51701|nemo-like kinase##AF197898|NLK|51701|nemo-like kinase##NM_016231|NLK|51701|nemo-like kinase##AF180819|NLK|51701|nemo-like kinase##AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108##NM_014573|TMEM97|27346|transmembrane protein 97##L19183|TMEM97|27346|transmembrane protein 97##AK299511|TMEM97|27346|transmembrane protein 97##AK307678|TMEM97|27346|transmembrane protein 97##BC017362|TMEM97|27346|transmembrane protein 97##BC091504|TMEM97|27346|transmembrane protein 97##AK293331|TMEM97|27346|transmembrane protein 97##AY224601|IFT20|90410|intraflagellar transport 20 homolog (Chlamydomonas)##BC038094|IFT20|90410|intraflagellar transport 20 homolog (Chlamydomonas)##BC002640|IFT20|90410|intraflagellar transport 20 homolog (Chlamydomonas)##NM_174887|IFT20|90410|intraflagellar transport 20 homolog (Chlamydomonas)##NM_021137|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##BC003694|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##AK300584|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##AK312387|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##BC001643|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##BC001949|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##M80783|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	0.97469	CTCF.p2:5:0.975
chr6	97074764	97074902	reg1008446.p1	11.329	+	NM_001170807 NM_020482 AK058175 BC029490 BC021723 AK223539	-64364	+	TSC_hg19_v1_chr6_+_96969734 AB018319 CU690338	-105094	+	TSC_hg19_v1_chr6_+_96969716 NM_015323 BC015377 AK307651 BC036379 BC028608	-105134	+	TSC_hg19_v1_chr6_-_97285392 AB030566 AK313535 AB209347 AK289839 NM_001143957 NM_030784	210398	-	HQ257923 TSC_hg19_v1_chr6_-_97345742 AF060508 AK311850 BC039464	270877	-	TSC_hg19_v1_chr6_-_97345751 BC018802 AF161474	270919	-	NM_001170807|FHL5|9457|four and a half LIM domains 5##NM_020482|FHL5|9457|four and a half LIM domains 5##AK058175|FHL5|9457|four and a half LIM domains 5##BC029490|FHL5|9457|four and a half LIM domains 5##BC021723|FHL5|9457|four and a half LIM domains 5##AK223539|FHL5|9457|four and a half LIM domains 5##AB018319|UFL1|23376|UFM1-specific ligase 1##NM_015323|UFL1|23376|UFM1-specific ligase 1##BC015377|UFL1|23376|UFM1-specific ligase 1##AK307651|UFL1|23376|UFM1-specific ligase 1##BC036379|UFL1|23376|UFM1-specific ligase 1##BC028608|UFL1|23376|UFM1-specific ligase 1##AB030566|GPR63|81491|G protein-coupled receptor 63##AK313535|GPR63|81491|G protein-coupled receptor 63##AB209347|GPR63|81491|G protein-coupled receptor 63##AK289839|GPR63|81491|G protein-coupled receptor 63##NM_001143957|GPR63|81491|G protein-coupled receptor 63##NM_030784|GPR63|81491|G protein-coupled receptor 63##HQ257923|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF060508|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK311850|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC039464|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC018802|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF161474|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	0.997359	CTCF.p2:-28:0.997
chr7	66465788	66465915	reg1008188.p1	11.329	+	TSC_hg19_v1_chr7_+_66461858 BC042156 NM_018264 AK001762 BC015591 BC051888	-3993	+	CU688080 TSC_hg19_v1_chr7_-_66460574 BC065700 AF151855 AK001779 AY169963 NM_016038 AK289609	-5351	-	TSC_hg19_v1_chr7_+_66386238 BC010519	-79580	+	TSC_hg19_v1_chr7_-_66767458 BC029419 D38438 D38500 BC029368 BC038841 BC056507	301577	-	TSC_hg19_v1_chr7_+_66767639 AK023257 AK308931	301757	+	TSC_hg19_v1_chr7_+_66767642 AK307290	301797	+	BC042156|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##NM_018264|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##AK001762|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##BC015591|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##BC051888|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##BC065700|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AF151855|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AK001779|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AY169963|SBDS|51119|Shwachman-Bodian-Diamond syndrome##NM_016038|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AK289609|SBDS|51119|Shwachman-Bodian-Diamond syndrome##BC010519|C7orf42|55069|chromosome 7 open reading frame 42##BC029419|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##D38438|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##D38500|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##BC029368|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##BC038841|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##AK023257|STAG3L4|64940|stromal antigen 3-like 4##AK308931|STAG3L4|64940|stromal antigen 3-like 4##AK307290|STAG3L4|64940|stromal antigen 3-like 4	0.998671	CTCF.p2:-2:0.999
chr10	12295013	12295148	reg1008277.p1	11.328	+	TSC_hg19_v1_chr10_+_12238212 BC001600 AK289362 CR456966	-56854	+	TSC_hg19_v1_chr10_+_12238194 BC009598	-56881	+	TSC_hg19_v1_chr10_+_12238186 U27112 AK308790	-56898	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	96495	+	TSC_hg19_v1_chr10_+_12391709 BC035745	96637	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	96697	+	BC001600|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289362|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##CR456966|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##BC009598|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##U27112|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK308790|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID	0.630464	CTCF.p2:-11:0.630
chr10	74100287	74100426	reg1009741.p1	11.328	+	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-66532	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-124245	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-124568	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	14322	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	14570	-	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	183363	-	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1	0.993541	CTCF.p2:15:0.994
chr9	140567400	140567527	reg1007558.p1	11.328	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-53996	+	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	-54020	+	TSC_hg19_v1_chr9_-_140513273 BC011781 AF267857 NM_032937	-54170	-	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	71066	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	204771	+	TSC_hg19_v1_chr9_+_140918045 AB209467	350611	+	BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC011781|C9orf37|85026|chromosome 9 open reading frame 37##AF267857|C9orf37|85026|chromosome 9 open reading frame 37##NM_032937|C9orf37|85026|chromosome 9 open reading frame 37##AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit	0.726084	CTCF.p2:-12:0.726
chr19	8804762	8804888	reg1009997.p1	11.327	+	TSC_hg19_v1_chr19_-_8675585 AB209515 NM_030957	-129233	-	TSC_hg19_v1_chr19_-_8642338 AB290178	-162427	-	TSC_hg19_v1_chr19_-_8642317 AK301166 AK310058 AB210037 AK131106 NM_012335	-162503	-	AY248901 AK292258 BC024028 TSC_hg19_v1_chr19_-_8809146 BC045752 NM_178525	4287	-	BC137046 BC151149 NM_001004699	36527	+	AK055494 NM_144693	128739	-	AB209515|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##NM_030957|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##AB290178|MYO1F|4542|myosin IF##AK301166|MYO1F|4542|myosin IF##AB210037|MYO1F|4542|myosin IF##AK131106|MYO1F|4542|myosin IF##NM_012335|MYO1F|4542|myosin IF##AY248901|ACTL9|284382|actin-like 9##AK292258|ACTL9|284382|actin-like 9##BC024028|ACTL9|284382|actin-like 9##BC045752|ACTL9|284382|actin-like 9##NM_178525|ACTL9|284382|actin-like 9##BC137046|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##BC151149|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##NM_001004699|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##AK055494|ZNF558|148156|zinc finger protein 558##NM_144693|ZNF558|148156|zinc finger protein 558	0.987881	CTCF.p2:-5:0.988
chr3	194722799	194722915	reg1007697.p1	11.327	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-315354	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-316234	+	NM_018385	-329652	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	268993	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	440845	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	547256	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.935677	CTCF.p2:-14:0.936
chr7	107821639	107821779	reg1009971.p1	11.327	+	BC142619 BC140804 BC144591 AF028816 AK300385 NM_007356	-50917	-	AB384752 TSC_hg19_v1_chr7_-_107643594 BC113455 M61916 BX648251 AK303501 AK309921 AK307611 BC044633 BC052598 NM_002291	-178104	-	AK300077 TSC_hg19_v1_chr7_+_107531630 AK225289 AK310220 AB209703 BC018648 BC018696 J03620 AB529125 CU676276	-290053	+	AJ001057 AB385311 NM_001037132	58843	-	TSC_hg19_v1_chr7_-_108096830 BC114570 BC115736 AB002341 BX538010 AK299870 BC098401 NM_001193582 NM_001193583 NM_001193584 NM_005010	275220	-	TSC_hg19_v1_chr7_-_108142934 BC005203 AK002115	321263	-	BC142619|LAMB4|22798|laminin, beta 4##BC140804|LAMB4|22798|laminin, beta 4##BC144591|LAMB4|22798|laminin, beta 4##AF028816|LAMB4|22798|laminin, beta 4##AK300385|LAMB4|22798|laminin, beta 4##NM_007356|LAMB4|22798|laminin, beta 4##BC113455|LAMB1|3912|laminin, beta 1##M61916|LAMB1|3912|laminin, beta 1##BX648251|LAMB1|3912|laminin, beta 1##AK303501|LAMB1|3912|laminin, beta 1##AK309921|LAMB1|3912|laminin, beta 1##AK307611|LAMB1|3912|laminin, beta 1##BC044633|LAMB1|3912|laminin, beta 1##BC052598|LAMB1|3912|laminin, beta 1##NM_002291|LAMB1|3912|laminin, beta 1##AK300077|DLD|1738|dihydrolipoamide dehydrogenase##AK225289|DLD|1738|dihydrolipoamide dehydrogenase##AK310220|DLD|1738|dihydrolipoamide dehydrogenase##AB209703|DLD|1738|dihydrolipoamide dehydrogenase##BC018648|DLD|1738|dihydrolipoamide dehydrogenase##BC018696|DLD|1738|dihydrolipoamide dehydrogenase##J03620|DLD|1738|dihydrolipoamide dehydrogenase##AJ001057|NRCAM|4897|neuronal cell adhesion molecule##NM_001037132|NRCAM|4897|neuronal cell adhesion molecule##BC114570|NRCAM|4897|neuronal cell adhesion molecule##BC115736|NRCAM|4897|neuronal cell adhesion molecule##AB002341|NRCAM|4897|neuronal cell adhesion molecule##BX538010|NRCAM|4897|neuronal cell adhesion molecule##AK299870|NRCAM|4897|neuronal cell adhesion molecule##BC098401|NRCAM|4897|neuronal cell adhesion molecule##NM_001193582|NRCAM|4897|neuronal cell adhesion molecule##NM_001193583|NRCAM|4897|neuronal cell adhesion molecule##NM_001193584|NRCAM|4897|neuronal cell adhesion molecule##NM_005010|NRCAM|4897|neuronal cell adhesion molecule##BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8##AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8	0.549733	CTCF.p2:-24:0.539
chr10	45730774	45730889	reg1009019.p1	11.326	+	TSC_hg19_v1_chr10_-_45496265 AK311351 HQ258049 BC062568 BC130369 BC130395 AK055129 NM_001039380	-234467	-	NM_006963 AK291508 AK312278 BC053687 BC010642	-234504	+	BC011402 AB025244 TSC_hg19_v1_chr10_-_45474258 AK002191 AK098476 AL136653 AB022718 AK300839 AK312496 NM_007021	-256562	-	AK131555 NM_001004297	80224	-	TSC_hg19_v1_chr10_+_45869638 AB208946 NM_000698 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223	138806	+	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	138866	+	AK311351|C10orf25|220979|chromosome 10 open reading frame 25##HQ258049|C10orf25|220979|chromosome 10 open reading frame 25##BC062568|C10orf25|220979|chromosome 10 open reading frame 25##BC130369|C10orf25|220979|chromosome 10 open reading frame 25##BC130395|C10orf25|220979|chromosome 10 open reading frame 25##AK055129|C10orf25|220979|chromosome 10 open reading frame 25##NM_001039380|C10orf25|220979|chromosome 10 open reading frame 25##NM_006963|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK291508|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK312278|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC053687|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC010642|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC011402|C10orf10|11067|chromosome 10 open reading frame 10##AB025244|C10orf10|11067|chromosome 10 open reading frame 10##AK002191|C10orf10|11067|chromosome 10 open reading frame 10##AK098476|C10orf10|11067|chromosome 10 open reading frame 10##AL136653|C10orf10|11067|chromosome 10 open reading frame 10##AB022718|C10orf10|11067|chromosome 10 open reading frame 10##AK300839|C10orf10|11067|chromosome 10 open reading frame 10##AK312496|C10orf10|11067|chromosome 10 open reading frame 10##NM_007021|C10orf10|11067|chromosome 10 open reading frame 10##AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##AB208946|ALOX5|240|arachidonate 5-lipoxygenase##NM_000698|ALOX5|240|arachidonate 5-lipoxygenase##AK225603|ALOX5|240|arachidonate 5-lipoxygenase##BC130332|ALOX5|240|arachidonate 5-lipoxygenase##BC132677|ALOX5|240|arachidonate 5-lipoxygenase##BC143985|ALOX5|240|arachidonate 5-lipoxygenase##BC143986|ALOX5|240|arachidonate 5-lipoxygenase##AK315223|ALOX5|240|arachidonate 5-lipoxygenase##BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase	0.999478	CTCF.p2:-1:0.999
chr12	10186529	10186664	reg1010085.p1	11.324	+	AY358265 NM_207345 AK307335	-3321	+	AY358810 AK128243 NM_001129998 NM_205852 BC136805 BC136806 AK131027 BC036036 DQ368812	-23305	+	BX647321 AB528702 AF124841 AY358599 NM_001099431 NM_016509	-34803	-	CU691652 DQ892440 DQ895651 AK300979 AK291584 BC039072 AK313589 AK075114 BC067746 AF200949 NM_016511 AK091989 AX747295 AY358587	64995	-	AF400595 AF400596 AF400597 AF400598 AF400599 AF400600 AF400601 AF400602 AY026769 AY026770 AY026771 CU687154 AF313469 BC013385 AY009090 AK297028 BC093829 BC093831 BC071746 AK298679 AK298724 AK313247 CR749536 AK295108 AF313468 AJ312372 AJ312373 AY359002 AK294111 NM_022570 NM_197947 NM_197948 NM_197949 NM_197950 NM_197954	96177	-	AB102861 AB590414 CU692540 DQ891409 DQ894585 AF035776 AK292124 AK295409 AK298040 BC022295 BC055085 AB010710 AK308009 NM_001172632 NM_001172633 NM_002543	138136	-	AY358265|CLEC9A|283420|C-type lectin domain family 9, member A##NM_207345|CLEC9A|283420|C-type lectin domain family 9, member A##AK307335|CLEC9A|283420|C-type lectin domain family 9, member A##AY358810|CLEC12B|387837|C-type lectin domain family 12, member B##AK128243|CLEC12B|387837|C-type lectin domain family 12, member B##NM_001129998|CLEC12B|387837|C-type lectin domain family 12, member B##NM_205852|CLEC12B|387837|C-type lectin domain family 12, member B##BC136805|CLEC12B|387837|C-type lectin domain family 12, member B##BC136806|CLEC12B|387837|C-type lectin domain family 12, member B##AK131027|CLEC12B|387837|C-type lectin domain family 12, member B##BC036036|CLEC12B|387837|C-type lectin domain family 12, member B##DQ368812|CLEC12B|387837|C-type lectin domain family 12, member B##BX647321|CLEC1B|51266|C-type lectin domain family 1, member B##AF124841|CLEC1B|51266|C-type lectin domain family 1, member B##AY358599|CLEC1B|51266|C-type lectin domain family 1, member B##NM_001099431|CLEC1B|51266|C-type lectin domain family 1, member B##NM_016509|CLEC1B|51266|C-type lectin domain family 1, member B##DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A##DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A##AK300979|CLEC1A|51267|C-type lectin domain family 1, member A##AK291584|CLEC1A|51267|C-type lectin domain family 1, member A##BC039072|CLEC1A|51267|C-type lectin domain family 1, member A##AK313589|CLEC1A|51267|C-type lectin domain family 1, member A##AK075114|CLEC1A|51267|C-type lectin domain family 1, member A##BC067746|CLEC1A|51267|C-type lectin domain family 1, member A##AF200949|CLEC1A|51267|C-type lectin domain family 1, member A##NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A##AK091989|CLEC1A|51267|C-type lectin domain family 1, member A##AY358587|CLEC1A|51267|C-type lectin domain family 1, member A##AF400595|CLEC7A|64581|C-type lectin domain family 7, member A##AF400596|CLEC7A|64581|C-type lectin domain family 7, member A##AF400597|CLEC7A|64581|C-type lectin domain family 7, member A##AF400598|CLEC7A|64581|C-type lectin domain family 7, member A##AF400599|CLEC7A|64581|C-type lectin domain family 7, member A##AF400600|CLEC7A|64581|C-type lectin domain family 7, member A##AF400601|CLEC7A|64581|C-type lectin domain family 7, member A##AF400602|CLEC7A|64581|C-type lectin domain family 7, member A##AY026769|CLEC7A|64581|C-type lectin domain family 7, member A##AY026770|CLEC7A|64581|C-type lectin domain family 7, member A##AY026771|CLEC7A|64581|C-type lectin domain family 7, member A##AF313469|CLEC7A|64581|C-type lectin domain family 7, member A##BC013385|CLEC7A|64581|C-type lectin domain family 7, member A##AY009090|CLEC7A|64581|C-type lectin domain family 7, member A##AK297028|CLEC7A|64581|C-type lectin domain family 7, member A##BC093829|CLEC7A|64581|C-type lectin domain family 7, member A##BC093831|CLEC7A|64581|C-type lectin domain family 7, member A##BC071746|CLEC7A|64581|C-type lectin domain family 7, member A##AK298679|CLEC7A|64581|C-type lectin domain family 7, member A##AK298724|CLEC7A|64581|C-type lectin domain family 7, member A##AK313247|CLEC7A|64581|C-type lectin domain family 7, member A##CR749536|CLEC7A|64581|C-type lectin domain family 7, member A##AK295108|CLEC7A|64581|C-type lectin domain family 7, member A##AF313468|CLEC7A|64581|C-type lectin domain family 7, member A##AJ312372|CLEC7A|64581|C-type lectin domain family 7, member A##AJ312373|CLEC7A|64581|C-type lectin domain family 7, member A##AY359002|CLEC7A|64581|C-type lectin domain family 7, member A##AK294111|CLEC7A|64581|C-type lectin domain family 7, member A##NM_022570|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197947|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197948|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197949|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197950|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197954|CLEC7A|64581|C-type lectin domain family 7, member A##AB102861|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##DQ891409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##DQ894585|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AF035776|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK292124|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK295409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK298040|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##BC022295|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##BC055085|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AB010710|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK308009|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_001172632|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_001172633|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_002543|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1	0.380649	CTCF.p2:-18:0.381
chr14	66826288	66826418	reg1009173.p1	11.324	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-946628	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-946865	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-947027	-	AB037806 AF272663 NM_001024218 NM_020806	147771	+	TSC_hg19_v1_chr14_+_66974859 AK025169	148500	+	TSC_hg19_v1_chr14_+_66974870 AK315569	148516	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.991277	CTCF.p2:-16:0.991
chr14	76448876	76448965	reg1007403.p2	11.323	+	NM_003239	-829	-	AK313564 TSC_hg19_v1_chr14_-_76447479 X14149 J03241	-1449	-	TSC_hg19_v1_chr14_-_76447323 BC018503 EF560714	-1590	-	TSC_hg19_v1_chr14_+_76452112 NM_001102564 NM_052873 AK302944 AK056735 BC032566 BC010436 BC042852 CU679711	3172	+	TSC_hg19_v1_chr14_+_76618258 NM_017926 NM_017972 BC058032	169336	+	TSC_hg19_v1_chr14_+_76618279 AB032978	169357	+	NM_003239|TGFB3|7043|transforming growth factor, beta 3##AK313564|TGFB3|7043|transforming growth factor, beta 3##X14149|TGFB3|7043|transforming growth factor, beta 3##J03241|TGFB3|7043|transforming growth factor, beta 3##BC018503|TGFB3|7043|transforming growth factor, beta 3##EF560714|TGFB3|7043|transforming growth factor, beta 3##NM_001102564|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##NM_052873|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##AK302944|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##AK056735|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##BC010436|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##BC042852|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##NM_017926|C14orf118|55668|chromosome 14 open reading frame 118##NM_017972|C14orf118|55668|chromosome 14 open reading frame 118##BC058032|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118	0.273206	CTCF.p2:33:0.273
chr12	53264377	53264495	reg1007292.p2	11.322	+	AB463817 AX721217 AK298636 AK096419 AK290901 NM_173352	-21690	-	AJ564105 BC063648 NM_175834 BC039148	-36367	-	CU692074 EU832356 EU832441 BC042174 X67683 BC012867 AK098110 AK296582 AK299394 AK299400 AK299451 AK307941 NM_002272	-56565	-	CU687300 AB528612 AM392826 AM392892 DQ892637 DQ895875 U76549 M34225 M26512 BC075839 BC073760 X74929 BC000654 Z36777 BC063513 TSC_hg19_v1_chr12_-_53298839 AK222941 D28446 NM_002273	34380	-	NM_199187 AK308506	78225	+	NM_000224 TSC_hg19_v1_chr12_+_53342874	78425	+	AK298636|KRT78|196374|keratin 78##AK096419|KRT78|196374|keratin 78##AK290901|KRT78|196374|keratin 78##NM_173352|KRT78|196374|keratin 78##AJ564105|KRT79|338785|keratin 79##BC063648|KRT79|338785|keratin 79##NM_175834|KRT79|338785|keratin 79##BC039148|KRT79|338785|keratin 79##EU832356|KRT4|3851|keratin 4##EU832441|KRT4|3851|keratin 4##BC042174|KRT4|3851|keratin 4##X67683|KRT4|3851|keratin 4##BC012867|KRT4|3851|keratin 4##AK098110|KRT4|3851|keratin 4##AK296582|KRT4|3851|keratin 4##AK299394|KRT4|3851|keratin 4##AK299400|KRT4|3851|keratin 4##AK299451|KRT4|3851|keratin 4##AK307941|KRT4|3851|keratin 4##NM_002272|KRT4|3851|keratin 4##AM392826|KRT8|3856|keratin 8##AM392892|KRT8|3856|keratin 8##DQ892637|KRT8|3856|keratin 8##DQ895875|KRT8|3856|keratin 8##U76549|KRT8|3856|keratin 8##M34225|KRT8|3856|keratin 8##M26512|KRT8|3856|keratin 8##BC075839|KRT8|3856|keratin 8##BC073760|KRT8|3856|keratin 8##X74929|KRT8|3856|keratin 8##BC000654|KRT8|3856|keratin 8##Z36777|KRT8|3856|keratin 8##BC063513|KRT8|3856|keratin 8##AK222941|KRT8|3856|keratin 8##NM_002273|KRT8|3856|keratin 8##NM_199187|KRT18|3875|keratin 18##AK308506|KRT18|3875|keratin 18##NM_000224|KRT18|3875|keratin 18	0.703703	CTCF.p2:5:0.704
chr3	58203023	58203152	reg1009368.p1	11.322	+	NM_004944	-2690	-	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	-208940	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-459885	+	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	20196	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	20443	+	TSC_hg19_v1_chr3_+_58291985 NM_001098783 NM_007042	88883	+	NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6##NM_001098783|RPP14|11102|ribonuclease P/MRP 14kDa subunit##NM_007042|RPP14|11102|ribonuclease P/MRP 14kDa subunit	0.691537	CTCF.p2:2:0.692
chr10	98053151	98053272	reg1007906.p2	11.321	+	AM180327 AM180328 AM180329 AM180330 AM180331 AM180332 AM180333 AM180334 AM180335 AM180336 AM180337 AM180338 AM180339 AM180340 AM180341 AM180342 AM180343 AM180344 AM180345 AM180346 BC018906 BC110298 AK027779 AF068180 AF068181 AK225546 NM_001114094 NM_013314	-21968	-	BC109045 BC109046 TSC_hg19_v1_chr10_+_97889812 AK095317 BC030967	-163469	+	TSC_hg19_v1_chr10_+_97889471 CR627437 NM_014803 BC011627	-163715	+	NM_001017520 NM_004088 AB046378 AK313615 M26144 BC012920 AK223317 DQ891465 DQ894645	10957	+	AF367761 NM_001040102 NM_001040103 NM_033207	65863	-	AB384048 BC113577 BC112341 BC112366 AB023149 BC013871 BC030548 TSC_hg19_v1_chr10_-_98273674 AK026106 NM_012465	220352	-	AM180327|BLNK|29760|B-cell linker##AM180328|BLNK|29760|B-cell linker##AM180329|BLNK|29760|B-cell linker##AM180330|BLNK|29760|B-cell linker##AM180331|BLNK|29760|B-cell linker##AM180332|BLNK|29760|B-cell linker##AM180333|BLNK|29760|B-cell linker##AM180334|BLNK|29760|B-cell linker##AM180335|BLNK|29760|B-cell linker##AM180336|BLNK|29760|B-cell linker##AM180337|BLNK|29760|B-cell linker##AM180338|BLNK|29760|B-cell linker##AM180339|BLNK|29760|B-cell linker##AM180340|BLNK|29760|B-cell linker##AM180341|BLNK|29760|B-cell linker##AM180342|BLNK|29760|B-cell linker##AM180343|BLNK|29760|B-cell linker##AM180344|BLNK|29760|B-cell linker##AM180345|BLNK|29760|B-cell linker##AM180346|BLNK|29760|B-cell linker##BC018906|BLNK|29760|B-cell linker##BC110298|BLNK|29760|B-cell linker##AK027779|BLNK|29760|B-cell linker##AF068180|BLNK|29760|B-cell linker##AF068181|BLNK|29760|B-cell linker##AK225546|BLNK|29760|B-cell linker##NM_001114094|BLNK|29760|B-cell linker##NM_013314|BLNK|29760|B-cell linker##BC109045|ZNF518A|9849|zinc finger protein 518A##BC109046|ZNF518A|9849|zinc finger protein 518A##BC030967|ZNF518A|9849|zinc finger protein 518A##CR627437|ZNF518A|9849|zinc finger protein 518A##NM_014803|ZNF518A|9849|zinc finger protein 518A##NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal##NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal##AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal##AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal##M26144|DNTT|1791|deoxynucleotidyltransferase, terminal##BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal##AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal##AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##BC113577|TLL2|7093|tolloid-like 2##BC112341|TLL2|7093|tolloid-like 2##BC112366|TLL2|7093|tolloid-like 2##AB023149|TLL2|7093|tolloid-like 2##BC013871|TLL2|7093|tolloid-like 2##BC030548|TLL2|7093|tolloid-like 2##AK026106|TLL2|7093|tolloid-like 2##NM_012465|TLL2|7093|tolloid-like 2	0.0	
chr9	107505805	107505927	reg1009331.p1	11.321	+	BC140916 AB587601 NM_001004484	-49186	+	AB463958 NM_001001956	-125382	-	AB529292 NM_001004481 BC136824 BC136826	-137938	-	TSC_hg19_v1_chr9_+_107509977 BC005935 NM_015469 AK301410 AF161417 AK024015 AL117557 BC045830 CU675195	4144	+	AK002137 BC017914 BX647652 NM_018376 AK310397 BC005202	20586	+	AB055982 AB445477 TSC_hg19_v1_chr9_-_107665989	160131	-	BC140916|OR13D1|286365|olfactory receptor, family 13, subfamily D, member 1##NM_001004484|OR13D1|286365|olfactory receptor, family 13, subfamily D, member 1##NM_001001956|OR13C9|286362|olfactory receptor, family 13, subfamily C, member 9##NM_001004481|OR13C2|392376|olfactory receptor, family 13, subfamily C, member 2##BC136824|OR13C2|392376|olfactory receptor, family 13, subfamily C, member 2##BC136826|OR13C2|392376|olfactory receptor, family 13, subfamily C, member 2##BC005935|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##NM_015469|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AK301410|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AF161417|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AK024015|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AL117557|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##BC045830|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AK002137|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC017914|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BX647652|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##NM_018376|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##AK310397|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC005202|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##AB055982|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AB445477|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	0.992593	CTCF.p2:-4:0.993
chr3	43680148	43680276	reg1007828.p1	11.320	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-16699	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-16774	-	TSC_hg19_v1_chr3_+_43328077 AK291360 NM_001100594 NM_017719 BC071567 AK295187 CR749621 AK314376	-352143	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	52209	+	AK093476 AX748152 NM_001145030	603165	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	699418	+	AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK291360|SNRK|54861|SNF related kinase##NM_001100594|SNRK|54861|SNF related kinase##NM_017719|SNRK|54861|SNF related kinase##BC071567|SNRK|54861|SNF related kinase##AK295187|SNRK|54861|SNF related kinase##CR749621|SNRK|54861|SNF related kinase##AK314376|SNRK|54861|SNF related kinase##NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23	0.15269	
chr18	10787453	10787580	reg1008095.p2	11.319	+	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-261419	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-261460	+	TSC_hg19_v1_chr18_+_10526033 AK294038 U78107 AK314495	-261488	+	NM_022068	361244	-	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	901696	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	963999	+	CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK294038|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##U78107|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK314495|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.186484	
chr5	138897619	138897756	reg1008323.p1	11.319	+	NM_198282 TSC_hg19_v1_chr5_-_138862344	-35344	-	TSC_hg19_v1_chr5_-_138862306 AK095896 AX775913 BC047779 AK290661	-35415	-	AK304726 BC146912 BC146913 DQ462572 NM_001077693 EU025066 TSC_hg19_v1_chr5_-_138842329	-55377	-	TSC_hg19_v1_chr5_+_138940760 BC033349 NM_003339 NM_181838 BC048426	43086	+	TSC_hg19_v1_chr5_+_138940966 AK001428 BC019052 AK001311 AY651263	43238	+	TSC_hg19_v1_chr5_+_138941350 U39317 AB590980	43661	+	NM_198282|TMEM173|340061|transmembrane protein 173##AK095896|TMEM173|340061|transmembrane protein 173##AX775913|TMEM173|340061|transmembrane protein 173##BC047779|TMEM173|340061|transmembrane protein 173##AK290661|TMEM173|340061|transmembrane protein 173##BC146912|ECSCR|641700|endothelial cell-specific chemotaxis regulator##BC146913|ECSCR|641700|endothelial cell-specific chemotaxis regulator##DQ462572|ECSCR|641700|endothelial cell-specific chemotaxis regulator##NM_001077693|ECSCR|641700|endothelial cell-specific chemotaxis regulator##EU025066|ECSCR|641700|endothelial cell-specific chemotaxis regulator##BC033349|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_003339|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_181838|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC048426|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001428|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC019052|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001311|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AY651263|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##U39317|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2	0.973233	CTCF.p2:2:0.973
chr9	133646463	133646600	reg1010205.p1	11.319	+	NM_007313 AB209642 M14753	-57212	+	TSC_hg19_v1_chr9_+_133569166 AK001916 AK296605 NM_014285 AK022460 AK090512 AK303163 BC000747 DQ892753 EU176744 AB463621	-77367	+	AY004252 NM_021619	-106551	+	TSC_hg19_v1_chr9_+_133710665 M30833 X16416	64136	+	TSC_hg19_v1_chr9_+_133710748 M14754 NM_005157	64257	+	AB109625 BC101127 BC101128 EU832764 GQ129307 NM_198180	122693	-	NM_007313|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AB209642|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M14753|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AK001916|EXOSC2|23404|exosome component 2##AK296605|EXOSC2|23404|exosome component 2##NM_014285|EXOSC2|23404|exosome component 2##AK022460|EXOSC2|23404|exosome component 2##AK090512|EXOSC2|23404|exosome component 2##AK303163|EXOSC2|23404|exosome component 2##BC000747|EXOSC2|23404|exosome component 2##DQ892753|EXOSC2|23404|exosome component 2##EU176744|EXOSC2|23404|exosome component 2##AY004252|PRDM12|59335|PR domain containing 12##NM_021619|PRDM12|59335|PR domain containing 12##M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AB109625|QRFP|347148|pyroglutamylated RFamide peptide##BC101127|QRFP|347148|pyroglutamylated RFamide peptide##BC101128|QRFP|347148|pyroglutamylated RFamide peptide##EU832764|QRFP|347148|pyroglutamylated RFamide peptide##GQ129307|QRFP|347148|pyroglutamylated RFamide peptide##NM_198180|QRFP|347148|pyroglutamylated RFamide peptide	0.419643	CTCF.p2:-7:0.420
chr1	178511728	178511864	reg1006827.p2	11.318	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-29530	+	AF047711 NM_004841 AK290308	-201162	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-448155	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	182577	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	328350	-	TSC_hg19_v1_chr1_+_178995028 AB007944	483224	+	AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##BC110611|RASAL2|9462|RAS protein activator like 2##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##AB007944|FAM20B|9917|family with sequence similarity 20, member B	0.577054	CTCF.p2:12:0.577
chr17	29885817	29885969	reg1008932.p2	11.318	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-70832	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-167029	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-167226	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	300378	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	342773	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	342838	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.870859	CTCF.p2:-13:0.871
chr17	4470144	4470248	reg1005813.p1	11.318	+	CU687648 BC063111 AK129501 AK300648 AK296645 TSC_hg19_v1_chr17_-_4463871 AK074646 NM_001122890 NM_153338	-6345	-	EU832503 BC050546 TSC_hg19_v1_chr17_-_4458680 AF147709 AK303150 AK301622 AK307948 NM_001105538 NM_014520	-11522	-	NM_001124758 BC041772 TSC_hg19_v1_chr17_+_4402177 AB441165	-67960	+	NM_198501 AK124452 BC105050 BC112177	17128	+	BC110859 NM_001114974	17637	+	AB590843 M23892 BC029032 NM_001140 AK290309 AK296792 AK296904 AK312557	74762	-	BC063111|GGT6|124975|gamma-glutamyltransferase 6##AK129501|GGT6|124975|gamma-glutamyltransferase 6##AK300648|GGT6|124975|gamma-glutamyltransferase 6##AK296645|GGT6|124975|gamma-glutamyltransferase 6##AK074646|GGT6|124975|gamma-glutamyltransferase 6##NM_001122890|GGT6|124975|gamma-glutamyltransferase 6##NM_153338|GGT6|124975|gamma-glutamyltransferase 6##EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a##BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a##AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a##AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a##AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a##AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_001124758|SPNS2|124976|spinster homolog 2 (Drosophila)##BC041772|SPNS2|124976|spinster homolog 2 (Drosophila)##AB441165|SPNS2|124976|spinster homolog 2 (Drosophila)##NM_198501|SMTNL2|342527|smoothelin-like 2##AK124452|SMTNL2|342527|smoothelin-like 2##BC105050|SMTNL2|342527|smoothelin-like 2##BC112177|SMTNL2|342527|smoothelin-like 2##BC110859|SMTNL2|342527|smoothelin-like 2##NM_001114974|SMTNL2|342527|smoothelin-like 2##M23892|ALOX15|246|arachidonate 15-lipoxygenase##BC029032|ALOX15|246|arachidonate 15-lipoxygenase##NM_001140|ALOX15|246|arachidonate 15-lipoxygenase##AK290309|ALOX15|246|arachidonate 15-lipoxygenase##AK296792|ALOX15|246|arachidonate 15-lipoxygenase##AK296904|ALOX15|246|arachidonate 15-lipoxygenase##AK312557|ALOX15|246|arachidonate 15-lipoxygenase	0.99824	CTCF.p2:-15:0.998
chr17	77397328	77397446	reg1006353.p1	11.318	+	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-326357	+	AF329840 NM_198593 BC021553	-366865	+	TSC_hg19_v1_chr17_+_77020308 AK055541	-377077	+	NM_001082575	81175	-	AY230663 BC041453 NM_178543 AY358622	307502	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	354594	+	AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2	0.832692	CTCF.p2:3:0.833
chr8	104291453	104291568	reg1006380.p1	11.318	+	TSC_hg19_v1_chr8_+_104152984 NM_001024372 NM_024812 BC035038 AK022077 BC011517 AK093819 AF371319 AF371323 DQ893318 DQ896633	-138510	+	TSC_hg19_v1_chr8_+_104033310 AK308632 BC010960 X69151 AK000064	-258190	+	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	-258243	+	NM_001164615 BX640609 AK313789	19164	+	NM_001164616 NM_003506 TSC_hg19_v1_chr8_+_104311103 AK299341 AK296824 BC060836 BC036106 AB012911 AK304092 AK316544	19581	+	TSC_hg19_v1_chr8_+_104383774 AK130063 BC021025 AY358914 AK300273	92230	+	NM_001024372|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_024812|BAALC|79870|brain and acute leukemia, cytoplasmic##BC035038|BAALC|79870|brain and acute leukemia, cytoplasmic##AK022077|BAALC|79870|brain and acute leukemia, cytoplasmic##BC011517|BAALC|79870|brain and acute leukemia, cytoplasmic##AK093819|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371319|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371323|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ893318|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ896633|BAALC|79870|brain and acute leukemia, cytoplasmic##AK308632|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC010960|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##X69151|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK000064|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##NM_001164615|FZD6|8323|frizzled family receptor 6##BX640609|FZD6|8323|frizzled family receptor 6##AK313789|FZD6|8323|frizzled family receptor 6##NM_001164616|FZD6|8323|frizzled family receptor 6##NM_003506|FZD6|8323|frizzled family receptor 6##AK299341|FZD6|8323|frizzled family receptor 6##AK296824|FZD6|8323|frizzled family receptor 6##BC060836|FZD6|8323|frizzled family receptor 6##BC036106|FZD6|8323|frizzled family receptor 6##AB012911|FZD6|8323|frizzled family receptor 6##AK304092|FZD6|8323|frizzled family receptor 6##AK316544|FZD6|8323|frizzled family receptor 6##AK130063|CTHRC1|115908|collagen triple helix repeat containing 1##BC021025|CTHRC1|115908|collagen triple helix repeat containing 1##AY358914|CTHRC1|115908|collagen triple helix repeat containing 1##AK300273|CTHRC1|115908|collagen triple helix repeat containing 1	0.012301	
chr15	73373804	73373927	reg1008041.p1	11.317	+	NM_001172623 NM_001172624 NM_002499 U61262 U72391 BC117161 BC143270 BC143271 BC143279 AB528479	-28945	+	TSC_hg19_v1_chr15_-_73076118 AK055526 NM_031284	-297742	-	BC044589 TSC_hg19_v1_chr15_-_73076072	-297794	-	TSC_hg19_v1_chr15_-_73661207 AJ132429 DQ854814	287342	-	AJ238850 NM_005477	287739	-	NM_001042367 AK131030 BC055412	361644	+	NM_001172623|NEO1|4756|neogenin 1##NM_001172624|NEO1|4756|neogenin 1##NM_002499|NEO1|4756|neogenin 1##U61262|NEO1|4756|neogenin 1##U72391|NEO1|4756|neogenin 1##BC117161|NEO1|4756|neogenin 1##BC143270|NEO1|4756|neogenin 1##BC143271|NEO1|4756|neogenin 1##BC143279|NEO1|4756|neogenin 1##AK055526|ADPGK|83440|ADP-dependent glucokinase##NM_031284|ADPGK|83440|ADP-dependent glucokinase##BC044589|ADPGK|83440|ADP-dependent glucokinase##AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60##AK131030|C15orf60|283677|chromosome 15 open reading frame 60##BC055412|C15orf60|283677|chromosome 15 open reading frame 60	0.982445	CTCF.p2:21:0.982
chr3	47830687	47830792	reg1008300.p1	11.317	+	TSC_hg19_v1_chr3_-_47823419 AK302541	-7232	-	TSC_hg19_v1_chr3_-_47823394 BC012101 NM_003074	-7342	-	TSC_hg19_v1_chr3_-_47823378 BC032564	-7362	-	BC047335 NM_014966 NM_138615 TSC_hg19_v1_chr3_+_47844624 BC028405 AK291266	13772	+	AK096791 TSC_hg19_v1_chr3_+_47844627 BC020126 BC038417 BC015029 AB020697 BC063510	13917	+	TSC_hg19_v1_chr3_+_47866475 AK002076	35749	+	AK302541|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1##BC012101|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1##NM_003074|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1##BC032564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1##BC047335|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##NM_014966|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##NM_138615|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC028405|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK291266|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK002076|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	0.23519	CTCF.p2:39:0.235
chr4	24689119	24689234	reg1007467.p1	11.317	+	TSC_hg19_v1_chr4_-_24586178 NM_001358	-102987	-	AB001636 TSC_hg19_v1_chr4_-_24586176	-103000	-	TSC_hg19_v1_chr4_-_24586154 AK303506 BC035974	-103016	-	NM_003102 TSC_hg19_v1_chr4_+_24797099 AK313935	107931	+	TSC_hg19_v1_chr4_+_24797207 BC014418 J02947	108042	+	AK125353 BC057761 BC067735 NM_001130726 TSC_hg19_v1_chr4_-_24914655	225405	-	NM_001358|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##NM_003102|SOD3|6649|superoxide dismutase 3, extracellular##AK313935|SOD3|6649|superoxide dismutase 3, extracellular##BC014418|SOD3|6649|superoxide dismutase 3, extracellular##J02947|SOD3|6649|superoxide dismutase 3, extracellular##AK125353|CCDC149|91050|coiled-coil domain containing 149##BC057761|CCDC149|91050|coiled-coil domain containing 149##BC067735|CCDC149|91050|coiled-coil domain containing 149##NM_001130726|CCDC149|91050|coiled-coil domain containing 149	0.188682	
chr5	66542024	66542169	reg1009975.p1	11.317	+	BC109069 BC109070 D83597 NM_005582 AK313177	-49496	-	AY830839 BC018692 NM_015183	-417493	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-649888	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	969484	+	TSC_hg19_v1_chr5_+_67511602 BC094795	969511	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	1042198	+	BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.999835	CTCF.p2:-18:1.000
chr15	32943580	32943688	reg1008054.p1	11.316	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	-9720	+	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	-35872	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-620891	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	66623	+	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	67532	-	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	416601	-	NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1	0.950674	CTCF.p2:-9:0.918
chr5	159343390	159343489	reg1008796.p2	11.316	+	BC074723 M65272 NM_002187	-585965	-	TSC_hg19_v1_chr5_+_158690297 AY444562 AK057996 BC013425	-653153	+	NM_145049	-653351	+	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	386	+	TSC_hg19_v1_chr5_+_159436145 AK315262	92708	+	AK222641 TSC_hg19_v1_chr5_+_159436161 AK222984 NM_003314 U46570	92728	+	BC074723|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##M65272|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_002187|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##AY444562|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK057996|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##BC013425|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_145049|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##AK315262|TTC1|7265|tetratricopeptide repeat domain 1##AK222641|TTC1|7265|tetratricopeptide repeat domain 1##AK222984|TTC1|7265|tetratricopeptide repeat domain 1##NM_003314|TTC1|7265|tetratricopeptide repeat domain 1##U46570|TTC1|7265|tetratricopeptide repeat domain 1	0.400479	CTCF.p2:-5:0.265
chr8	59301362	59301484	reg1009717.p1	11.315	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-394266	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1394997	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1395021	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	22462	+	X56088 M93133 BC101777 BC112184 NM_000780	111284	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	164329	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.759074	CTCF.p2:16:0.759
chr12	59507657	59507782	reg1010033.p1	11.314	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-193417	-	AY505340 BC126169 BC126171 BC143960 AY358288 NM_153377 TSC_hg19_v1_chr12_-_59314272	-193542	-	AK301162 AY358295 NM_001136051	-194404	-	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	482198	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	575420	+	BC050347 NM_178539	3078864	-	AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2	0.99007	CTCF.p2:-5:0.990
chr22	42362822	42362950	reg1008642.p2	11.314	+	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	-19763	-	EU035297 NM_001110215	-26664	-	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	-40087	-	TSC_hg19_v1_chr22_+_42372810 NM_019106 NM_145733 AK290037 AK299919 AL833942 BC111779 CR456572 AF285107 AF285108 AF285109	10022	+	AK128138 NM_152613 TSC_hg19_v1_chr22_+_42394808 AK129656 AK296138 BC022546 BC022549 BC038789 AK310980 CR456400 AB463345 CU012958 CU013246	31889	+	AB528190 CU013127 CU013415 DQ891874 DQ895062 CR456527 M38083 BC000095 TSC_hg19_v1_chr22_-_42466570	103549	-	CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_019106|SEPT3|55964|septin 3##NM_145733|SEPT3|55964|septin 3##AK290037|SEPT3|55964|septin 3##AK299919|SEPT3|55964|septin 3##AL833942|SEPT3|55964|septin 3##BC111779|SEPT3|55964|septin 3##CR456572|SEPT3|55964|septin 3##AF285107|SEPT3|55964|septin 3##AF285108|SEPT3|55964|septin 3##AF285109|SEPT3|55964|septin 3##AK128138|WBP2NL|164684|WBP2 N-terminal like##NM_152613|WBP2NL|164684|WBP2 N-terminal like##AK129656|WBP2NL|164684|WBP2 N-terminal like##AK296138|WBP2NL|164684|WBP2 N-terminal like##BC022546|WBP2NL|164684|WBP2 N-terminal like##BC022549|WBP2NL|164684|WBP2 N-terminal like##CR456400|WBP2NL|164684|WBP2 N-terminal like##CU013127|NAGA|4668|N-acetylgalactosaminidase, alpha-##CU013415|NAGA|4668|N-acetylgalactosaminidase, alpha-##DQ891874|NAGA|4668|N-acetylgalactosaminidase, alpha-##DQ895062|NAGA|4668|N-acetylgalactosaminidase, alpha-##CR456527|NAGA|4668|N-acetylgalactosaminidase, alpha-##M38083|NAGA|4668|N-acetylgalactosaminidase, alpha-##BC000095|NAGA|4668|N-acetylgalactosaminidase, alpha-	0.065112	
chr7	134639086	134639214	reg1008497.p1	11.314	+	BC014035 TSC_hg19_v1_chr7_+_134576197 BC061926 BC005006 D90452 D90453	-62877	+	NM_033139 NM_033140 TSC_hg19_v1_chr7_+_134576161	-62995	+	TSC_hg19_v1_chr7_+_134464419 BC040354	-174728	+	TSC_hg19_v1_chr7_+_134671258 AK302827 NM_178563 BC030651 AL832281 AK023045 AK311252	32135	+	NM_018295 TSC_hg19_v1_chr7_+_134832838 AK001862 AK225055 AK301268 BC020942	193697	+	NM_001243753 NM_001243755	215075	-	BC014035|CALD1|800|caldesmon 1##BC061926|CALD1|800|caldesmon 1##BC005006|CALD1|800|caldesmon 1##D90452|CALD1|800|caldesmon 1##D90453|CALD1|800|caldesmon 1##NM_033139|CALD1|800|caldesmon 1##NM_033140|CALD1|800|caldesmon 1##BC040354|CALD1|800|caldesmon 1##AK302827|AGBL3|340351|ATP/GTP binding protein-like 3##NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3##BC030651|AGBL3|340351|ATP/GTP binding protein-like 3##AL832281|AGBL3|340351|ATP/GTP binding protein-like 3##AK023045|AGBL3|340351|ATP/GTP binding protein-like 3##NM_018295|TMEM140|55281|transmembrane protein 140##AK001862|TMEM140|55281|transmembrane protein 140##AK225055|TMEM140|55281|transmembrane protein 140##AK301268|TMEM140|55281|transmembrane protein 140##BC020942|TMEM140|55281|transmembrane protein 140##NM_001243753|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243755|C7orf49|78996|chromosome 7 open reading frame 49	0.585034	CTCF.p2:-1:0.585
chr10	7914082	7914235	reg1009498.p1	11.313	+	AJ292190 NM_031923 AL117661	-53450	+	TSC_hg19_v1_chr10_+_7860467 BC105593 BC073884 BC017320 BC045106 AK307657 AK307521 BC062352 BC028077	-53682	+	TSC_hg19_v1_chr10_+_7830141 NM_001001973 NM_005174 BC000931 BC020824 AK292896 AK296803 D16562 D16563 BC016812 AK294061 BC010380 BC000470 BC013394 BC013865 CU677727 CR457403 BC026049	-84018	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	182491	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	182617	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	183325	+	AJ292190|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##NM_031923|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##AL117661|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC105593|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC073884|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC017320|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC045106|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##AK307657|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##AK307521|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC062352|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC028077|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##NM_001001973|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##NM_005174|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC000931|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC020824|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##AK292896|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##AK296803|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##D16562|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##D16563|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC016812|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##AK294061|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC010380|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC000470|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC013394|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC013865|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##CR457403|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC026049|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3	0.999516	CTCF.p2:-19:1.000
chr18	9148042	9148171	reg1008209.p1	11.313	+	AY533564 NM_001204056	-10546	+	TSC_hg19_v1_chr18_+_9136811 NM_001083625 NM_015208 BC070234 AK024808 AY373757 BC057225 AL834204	-11315	+	TSC_hg19_v1_chr18_+_9102715 AK312129 BC001632 BC017487 M22538 AK291865 AB590136 BC071689 DQ892593 DQ895813 CR456928	-45386	+	TSC_hg19_v1_chr18_+_9334800 AK027629 AK075550 NM_020648 AF196834 AJ297391	186684	+	TSC_hg19_v1_chr18_+_9334831 BC020490 AK315751	186751	+	TSC_hg19_v1_chr18_+_9475545 NM_006788 BC013126	327491	+	AY533564|ANKRD12|23253|ankyrin repeat domain 12##NM_001204056|ANKRD12|23253|ankyrin repeat domain 12##NM_001083625|ANKRD12|23253|ankyrin repeat domain 12##NM_015208|ANKRD12|23253|ankyrin repeat domain 12##BC070234|ANKRD12|23253|ankyrin repeat domain 12##AK024808|ANKRD12|23253|ankyrin repeat domain 12##AY373757|ANKRD12|23253|ankyrin repeat domain 12##BC057225|ANKRD12|23253|ankyrin repeat domain 12##AL834204|ANKRD12|23253|ankyrin repeat domain 12##AK312129|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC001632|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC017487|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##M22538|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK291865|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC071689|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ892593|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ895813|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##CR456928|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK027629|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK075550|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##NM_020648|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AF196834|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AJ297391|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##BC020490|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK315751|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##NM_006788|RALBP1|10928|ralA binding protein 1##BC013126|RALBP1|10928|ralA binding protein 1	0.840159	CTCF.p2:32:0.840
chr2	112806494	112806611	reg1007499.p2	11.313	+	TSC_hg19_v1_chr2_+_112656224 BC114917 BC114918	-150332	+	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	-150367	+	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	-164791	-	NM_032824 AK027587 TSC_hg19_v1_chr2_+_112812871	6289	+	TSC_hg19_v1_chr2_+_112812903 BC115373	6395	+	TSC_hg19_v1_chr2_+_112813153 AK290294 AY429534 AY429535	6635	+	BC114917|MERTK|10461|c-mer proto-oncogene tyrosine kinase##BC114918|MERTK|10461|c-mer proto-oncogene tyrosine kinase##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##NM_032824|TMEM87B|84910|transmembrane protein 87B##AK027587|TMEM87B|84910|transmembrane protein 87B##BC115373|TMEM87B|84910|transmembrane protein 87B##AK290294|TMEM87B|84910|transmembrane protein 87B##AY429534|TMEM87B|84910|transmembrane protein 87B##AY429535|TMEM87B|84910|transmembrane protein 87B	0.832708	CTCF.p2:0:0.833
chr3	32706412	32706508	reg1007984.p1	11.312	+	BX649189 TSC_hg19_v1_chr3_-_32612288 AK222573 AK222653 BC131620 AF078849 AK074348 AK293253 NM_016141	-94186	-	BC002797 TSC_hg19_v1_chr3_-_32544365 NM_017801	-162080	-	TSC_hg19_v1_chr3_-_32544335 AK000403	-162127	-	TSC_hg19_v1_chr3_+_32726700 AK023227 AK022952 NM_015442 AK309670 BC006382 BC002931 BC002928 AK297085 AK298693 CU678296 CU678298 DQ892895 DQ896143 EU831494 EU831581	20345	+	DQ232881 NM_001039111	153049	+	BC071751 NM_005508 AK292674	286640	+	BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC002797|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##NM_017801|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##AK000403|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##AK023227|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK022952|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##NM_015442|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK309670|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC006382|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002931|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002928|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK297085|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK298693|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ892895|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ896143|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831494|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831581|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ232881|TRIM71|131405|tripartite motif containing 71##NM_001039111|TRIM71|131405|tripartite motif containing 71##BC071751|CCR4|1233|chemokine (C-C motif) receptor 4##NM_005508|CCR4|1233|chemokine (C-C motif) receptor 4##AK292674|CCR4|1233|chemokine (C-C motif) receptor 4	0.970064	CTCF.p2:-14:0.970
chr1	30853352	30853489	reg1011660.p1	11.311	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-1290372	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-1295973	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-1296040	-	TSC_hg19_v1_chr1_+_31191648 AK057725	338211	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	343012	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	377212	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	0.997013	CTCF.p2:-2:0.997
chr1	36181189	36181329	reg1008678.p2	11.311	+	NM_002794	-73815	-	TSC_hg19_v1_chr1_-_36107140 NM_001199779	-74093	-	BT007137 CR456862 AB464087 DQ893539 DQ896799 TSC_hg19_v1_chr1_-_36107121 D26599 BC101836 BC105126 BC107901 BC000268 AK296956 AB209470	-74176	-	TSC_hg19_v1_chr1_-_36184424 BC026909 AK294352	3153	-	TSC_hg19_v1_chr1_-_36184816 AK096303 NM_152374	3532	-	TSC_hg19_v1_chr1_-_36235569 BC113116 BC115023 BC115024 BC115025 BC115026 BC115027 BC137279 BC140789 AF297866 NM_001190481 NM_022111 BC038991 BC018670 BC062215 AK308193	54256	-	NM_002794|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##NM_001199779|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BT007137|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##CR456862|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##DQ893539|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##DQ896799|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##D26599|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC101836|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC105126|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC107901|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC000268|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##AK296956|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##AB209470|PSMB2|5690|proteasome (prosome, macropain) subunit, beta type, 2##BC026909|C1orf216|127703|chromosome 1 open reading frame 216##AK294352|C1orf216|127703|chromosome 1 open reading frame 216##AK096303|C1orf216|127703|chromosome 1 open reading frame 216##NM_152374|C1orf216|127703|chromosome 1 open reading frame 216##BC113116|CLSPN|63967|claspin##BC115023|CLSPN|63967|claspin##BC115024|CLSPN|63967|claspin##BC115025|CLSPN|63967|claspin##BC115026|CLSPN|63967|claspin##BC115027|CLSPN|63967|claspin##BC137279|CLSPN|63967|claspin##BC140789|CLSPN|63967|claspin##AF297866|CLSPN|63967|claspin##NM_001190481|CLSPN|63967|claspin##NM_022111|CLSPN|63967|claspin##BC038991|CLSPN|63967|claspin##BC018670|CLSPN|63967|claspin##BC062215|CLSPN|63967|claspin##AK308193|CLSPN|63967|claspin	0.999601	CTCF.p2:10:1.000
chr6	89490608	89490744	reg1008939.p1	11.311	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-614910	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-635640	-	BC029488 NM_030960 AF203447	-733146	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	182515	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	182632	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	182671	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.999634	CTCF.p2:37:1.000
chr4	69137635	69137781	reg1009834.p1	11.310	+	BC126195 AK310210 AL833167 BX537945 AK290904 NM_182502	-26336	-	AK123556 NM_001129907	-53911	-	AK122625 NM_207407	-142122	-	TSC_hg19_v1_chr4_-_69215804 BC041119 AK056430 NM_001031732 NM_133370	78054	-	AK313859 NM_014058 AF064819 AK292787 AY359017 BC113412 BC113414	175478	+	AF548389 NM_001077 U59209	296521	-	BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B##AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B##AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B##BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B##AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B##NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B##AK123556|TMPRSS11BNL|401136|TMPRSS11B N terminal-like##NM_001129907|TMPRSS11BNL|401136|TMPRSS11B N terminal-like##AK122625|TMPRSS11F|389208|transmembrane protease, serine 11F##NM_207407|TMPRSS11F|389208|transmembrane protease, serine 11F##BC041119|YTHDC1|91746|YTH domain containing 1##AK056430|YTHDC1|91746|YTH domain containing 1##NM_001031732|YTHDC1|91746|YTH domain containing 1##NM_133370|YTHDC1|91746|YTH domain containing 1##AK313859|TMPRSS11E|28983|transmembrane protease, serine 11E##NM_014058|TMPRSS11E|28983|transmembrane protease, serine 11E##AF064819|TMPRSS11E|28983|transmembrane protease, serine 11E##AK292787|TMPRSS11E|28983|transmembrane protease, serine 11E##AY359017|TMPRSS11E|28983|transmembrane protease, serine 11E##BC113412|TMPRSS11E|28983|transmembrane protease, serine 11E##BC113414|TMPRSS11E|28983|transmembrane protease, serine 11E##AF548389|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##NM_001077|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17##U59209|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17	0.075271	
chr15	75591417	75591550	reg1005519.p1	11.309	+	AF263742 NM_001145224	-16305	+	AF263742 NM_001164404	-40585	+	TSC_hg19_v1_chr15_+_75494242 AF495726 BC011379 AK125604	-97240	+	NM_017828 AK225716 BC033744 AK000459 AK293708 AK057145 AK124968 AK314740 BC069195 BC068998 AL136872	36911	+	NM_024608 AK026055	47886	+	AB209141 TSC_hg19_v1_chr15_-_75660874	69378	-	AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001145224|GOLGA6D|653643|golgin A6 family, member D##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001164404|GOLGA6C|653641|golgin A6 family, member C##AF495726|C15orf39|56905|chromosome 15 open reading frame 39##BC011379|C15orf39|56905|chromosome 15 open reading frame 39##AK125604|C15orf39|56905|chromosome 15 open reading frame 39##NM_017828|COMMD4|54939|COMM domain containing 4##AK225716|COMMD4|54939|COMM domain containing 4##BC033744|COMMD4|54939|COMM domain containing 4##AK000459|COMMD4|54939|COMM domain containing 4##AK293708|COMMD4|54939|COMM domain containing 4##AK057145|COMMD4|54939|COMM domain containing 4##AK314740|COMMD4|54939|COMM domain containing 4##BC069195|COMMD4|54939|COMM domain containing 4##BC068998|COMMD4|54939|COMM domain containing 4##AL136872|COMMD4|54939|COMM domain containing 4##NM_024608|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)##AK026055|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)##AB209141|MAN2C1|4123|mannosidase, alpha, class 2C, member 1	0.919612	CTCF.p2:-1:0.920
chr22	18842005	18842133	reg1007683.p2	11.309	+	TSC_hg19_v1_chr22_+_18632936 AK313385 AL136690 BC014896	-209167	+	TSC_hg19_v1_chr22_+_18632731 NM_017414	-209335	+	TSC_hg19_v1_chr22_+_18593574 AJ245922 CR456600 BC104845 BC074827 AK315316	-248486	+	NM_005675 AF228707 TSC_hg19_v1_chr22_+_18893832 AK315115 BC047039 CR456434 AK098780 AB528122 CU012994 CU013282	51741	+	AB209472 TSC_hg19_v1_chr22_-_18923807 BC068260 BC094736 BC036534	81662	-	BC118597 BC121809 NM_001195226 NM_016335 U79754	81945	-	AK313385|USP18|11274|ubiquitin specific peptidase 18##AL136690|USP18|11274|ubiquitin specific peptidase 18##BC014896|USP18|11274|ubiquitin specific peptidase 18##NM_017414|USP18|11274|ubiquitin specific peptidase 18##AJ245922|TUBA8|51807|tubulin, alpha 8##CR456600|TUBA8|51807|tubulin, alpha 8##BC104845|TUBA8|51807|tubulin, alpha 8##BC074827|TUBA8|51807|tubulin, alpha 8##AK315316|TUBA8|51807|tubulin, alpha 8##NM_005675|DGCR6|8214|DiGeorge syndrome critical region gene 6##AF228707|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK315115|DGCR6|8214|DiGeorge syndrome critical region gene 6##BC047039|DGCR6|8214|DiGeorge syndrome critical region gene 6##CR456434|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK098780|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU012994|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU013282|DGCR6|8214|DiGeorge syndrome critical region gene 6##AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1##BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1##BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1##BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1##BC118597|PRODH|5625|proline dehydrogenase (oxidase) 1##BC121809|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_001195226|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_016335|PRODH|5625|proline dehydrogenase (oxidase) 1##U79754|PRODH|5625|proline dehydrogenase (oxidase) 1	0.92641	CTCF.p2:18:0.926
chr5	168414689	168414834	reg1009416.p1	11.309	+	TSC_hg19_v1_chr5_-_168271862 BC023515	-142902	-	TSC_hg19_v1_chr5_-_168006609 BC013705 NM_024594	-408246	-	TSC_hg19_v1_chr5_-_168006352 AK223285 AK022961	-408410	-	AB383998 AK310549 TSC_hg19_v1_chr5_-_168728144 BC142665 BC142717 AY358884 AB017169 BC098388 AB011538 BC146759 NM_003062	313197	-	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	595960	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	649483	+	BC013705|PANK3|79646|pantothenate kinase 3##NM_024594|PANK3|79646|pantothenate kinase 3##AK223285|PANK3|79646|pantothenate kinase 3##AK022961|PANK3|79646|pantothenate kinase 3##AK310549|SLIT3|6586|slit homolog 3 (Drosophila)##BC142665|SLIT3|6586|slit homolog 3 (Drosophila)##BC142717|SLIT3|6586|slit homolog 3 (Drosophila)##AY358884|SLIT3|6586|slit homolog 3 (Drosophila)##AB017169|SLIT3|6586|slit homolog 3 (Drosophila)##BC098388|SLIT3|6586|slit homolog 3 (Drosophila)##AB011538|SLIT3|6586|slit homolog 3 (Drosophila)##BC146759|SLIT3|6586|slit homolog 3 (Drosophila)##NM_003062|SLIT3|6586|slit homolog 3 (Drosophila)##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##NM_004946|DOCK2|1794|dedicator of cytokinesis 2	0.999607	CTCF.p2:0:1.000
chr8	57154599	57154707	reg1008501.p1	11.309	+	TSC_hg19_v1_chr8_+_57124347 AK095922 AK098285 AK290088 AY070434 AK225982 BC002546	-30314	+	NM_001011667 NM_001011668 NM_001011669 NM_001011670 NM_001011671 NM_024300 TSC_hg19_v1_chr8_+_57124314	-30339	+	AK296933 AK313663 NM_001114634 NM_001114635 NM_002655 TSC_hg19_v1_chr8_-_57123860	-30792	-	BC064525 AK057667 TSC_hg19_v1_chr8_-_57232687 BC037219	78017	-	TSC_hg19_v1_chr8_-_57232700 AY444559 AK294634	78065	-	AB083038 NM_138969 AK095159	78634	-	AK095922|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##AK098285|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##AK290088|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##AY070434|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##AK225982|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##BC002546|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011667|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011668|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011669|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011670|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011671|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_024300|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##AK296933|PLAG1|5324|pleiomorphic adenoma gene 1##AK313663|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001114634|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001114635|PLAG1|5324|pleiomorphic adenoma gene 1##NM_002655|PLAG1|5324|pleiomorphic adenoma gene 1##BC064525|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##AK057667|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##BC037219|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##AY444559|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##AK294634|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##AB083038|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##NM_138969|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##AK095159|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5	0.676973	CTCF.p2:11:0.677
chr20	1757977	1758109	reg1007640.p1	11.308	+	AY748247 AY748248 CU687894 BC064532 BC020629 AK292745 NM_001039508 NM_018556 NM_080816	-119652	-	AB590891 CU692960 BC131747 Y10376 BC025286 BC075835 TSC_hg19_v1_chr20_-_1600656 AK289866 AK313517 BX537992 NM_001083910 NM_001135844 NM_006065	-157405	-	DQ891297 EU176577 BC033502 NM_178460	-219721	-	TSC_hg19_v1_chr20_+_1874780 NM_001040022	116753	+	TSC_hg19_v1_chr20_+_1874954 BC075849 AK290776	116946	+	TSC_hg19_v1_chr20_+_1875136 AK298243	117091	+	AY748247|SIRPG|55423|signal-regulatory protein gamma##AY748248|SIRPG|55423|signal-regulatory protein gamma##BC064532|SIRPG|55423|signal-regulatory protein gamma##BC020629|SIRPG|55423|signal-regulatory protein gamma##AK292745|SIRPG|55423|signal-regulatory protein gamma##NM_001039508|SIRPG|55423|signal-regulatory protein gamma##NM_018556|SIRPG|55423|signal-regulatory protein gamma##NM_080816|SIRPG|55423|signal-regulatory protein gamma##BC131747|SIRPB1|10326|signal-regulatory protein beta 1##Y10376|SIRPB1|10326|signal-regulatory protein beta 1##BC025286|SIRPB1|10326|signal-regulatory protein beta 1##BC075835|SIRPB1|10326|signal-regulatory protein beta 1##AK289866|SIRPB1|10326|signal-regulatory protein beta 1##BX537992|SIRPB1|10326|signal-regulatory protein beta 1##NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1##NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1##NM_006065|SIRPB1|10326|signal-regulatory protein beta 1##DQ891297|SIRPD|128646|signal-regulatory protein delta##EU176577|SIRPD|128646|signal-regulatory protein delta##BC033502|SIRPD|128646|signal-regulatory protein delta##NM_178460|SIRPD|128646|signal-regulatory protein delta##NM_001040022|SIRPA|140885|signal-regulatory protein alpha##BC075849|SIRPA|140885|signal-regulatory protein alpha##AK290776|SIRPA|140885|signal-regulatory protein alpha##AK298243|SIRPA|140885|signal-regulatory protein alpha	0.963214	CTCF.p2:20:0.963
chr2	65414503	65414629	reg1009013.p1	11.308	+	TSC_hg19_v1_chr2_-_65357263 NM_004161 NM_015543	-57225	-	TSC_hg19_v1_chr2_-_65357236 BC000905 BX571747 AL050268 AK303678 AK055927 AK315495	-57347	-	AF498929 BT019528 BT019529 CR533479 CR536488 AB464118 AB590355 AM392684 CU674450 DQ894084 EU831590 EU831675 TSC_hg19_v1_chr2_-_65357083 M28209	-57491	-	TSC_hg19_v1_chr2_-_65454728 AK055581	40170	-	NM_001005386 NM_005722 TSC_hg19_v1_chr2_+_65454944 AK295157 AK301634 BC014546 BX649080 AF006082 AK315205 AB462954 EU831978 EU832071	40369	+	TSC_hg19_v1_chr2_-_65593766 AK299079	179207	-	NM_004161|RAB1A|5861|RAB1A, member RAS oncogene family##NM_015543|RAB1A|5861|RAB1A, member RAS oncogene family##BC000905|RAB1A|5861|RAB1A, member RAS oncogene family##BX571747|RAB1A|5861|RAB1A, member RAS oncogene family##AL050268|RAB1A|5861|RAB1A, member RAS oncogene family##AK303678|RAB1A|5861|RAB1A, member RAS oncogene family##AK055927|RAB1A|5861|RAB1A, member RAS oncogene family##AK315495|RAB1A|5861|RAB1A, member RAS oncogene family##AF498929|RAB1A|5861|RAB1A, member RAS oncogene family##BT019528|RAB1A|5861|RAB1A, member RAS oncogene family##BT019529|RAB1A|5861|RAB1A, member RAS oncogene family##CR533479|RAB1A|5861|RAB1A, member RAS oncogene family##CR536488|RAB1A|5861|RAB1A, member RAS oncogene family##AM392684|RAB1A|5861|RAB1A, member RAS oncogene family##DQ894084|RAB1A|5861|RAB1A, member RAS oncogene family##EU831590|RAB1A|5861|RAB1A, member RAS oncogene family##EU831675|RAB1A|5861|RAB1A, member RAS oncogene family##M28209|RAB1A|5861|RAB1A, member RAS oncogene family##AK055581|LOC729324|729324|hCG1986447##NM_001005386|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##NM_005722|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK295157|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK301634|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BC014546|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BX649080|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AF006082|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK315205|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU831978|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU832071|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK299079|SPRED2|200734|sprouty-related, EVH1 domain containing 2	0.985347	CTCF.p2:10:0.985
chrX	134099510	134099630	reg1009560.p1	11.308	+	AK316570 AF086333 TSC_hg19_v1_chrX_-_134049288 AK307196 BC005700 AK299074 AL137163 NM_019556	-50298	-	NM_001170782 NM_001170784 BC016784 NM_001170779 NM_001170781 NM_001170783 NM_138819 BC017868 AK090611 AK295485 AK310079 BC063491 BC065225	-158319	+	TSC_hg19_v1_chrX_-_133931236 BC019221 NM_001166599 AK124650 AK297720 NM_001166600 NM_001170757	-168367	-	BC008642 NM_001163438	25397	+	HQ258053 TSC_hg19_v1_chrX_-_134156520 BC063496 BC073159 BC113720 BC117393 BC086860 NM_001078173	56973	-	TSC_hg19_v1_chrX_+_134166384 NM_001078171 Y13374 AF038168 AF052096 BC106076 BC002385 BC002410	66790	+	AK316570|MOSPD1|56180|motile sperm domain containing 1##AF086333|MOSPD1|56180|motile sperm domain containing 1##AK307196|MOSPD1|56180|motile sperm domain containing 1##BC005700|MOSPD1|56180|motile sperm domain containing 1##AK299074|MOSPD1|56180|motile sperm domain containing 1##AL137163|MOSPD1|56180|motile sperm domain containing 1##NM_019556|MOSPD1|56180|motile sperm domain containing 1##NM_001170782|FAM122C|159091|family with sequence similarity 122C##NM_001170784|FAM122C|159091|family with sequence similarity 122C##BC016784|FAM122C|159091|family with sequence similarity 122C##NM_001170779|FAM122C|159091|family with sequence similarity 122C##NM_001170781|FAM122C|159091|family with sequence similarity 122C##NM_001170783|FAM122C|159091|family with sequence similarity 122C##NM_138819|FAM122C|159091|family with sequence similarity 122C##BC017868|FAM122C|159091|family with sequence similarity 122C##AK090611|FAM122C|159091|family with sequence similarity 122C##AK295485|FAM122C|159091|family with sequence similarity 122C##AK310079|FAM122C|159091|family with sequence similarity 122C##BC063491|FAM122C|159091|family with sequence similarity 122C##BC065225|FAM122C|159091|family with sequence similarity 122C##BC019221|FAM122B|159090|family with sequence similarity 122B##NM_001166599|FAM122B|159090|family with sequence similarity 122B##AK124650|FAM122B|159090|family with sequence similarity 122B##AK297720|FAM122B|159090|family with sequence similarity 122B##NM_001166600|FAM122B|159090|family with sequence similarity 122B##NM_001170757|FAM122B|159090|family with sequence similarity 122B##BC008642|CXorf69|644538|chromosome X open reading frame 69##NM_001163438|CXorf69|644538|chromosome X open reading frame 69##HQ258053|FAM127C|441518|family with sequence similarity 127, member C##BC063496|FAM127C|441518|family with sequence similarity 127, member C##BC073159|FAM127C|441518|family with sequence similarity 127, member C##BC113720|FAM127C|441518|family with sequence similarity 127, member C##BC117393|FAM127C|441518|family with sequence similarity 127, member C##BC086860|FAM127C|441518|family with sequence similarity 127, member C##NM_001078173|FAM127C|441518|family with sequence similarity 127, member C##NM_001078171|FAM127A|8933|family with sequence similarity 127, member A##Y13374|FAM127A|8933|family with sequence similarity 127, member A##AF038168|FAM127A|8933|family with sequence similarity 127, member A##AF052096|FAM127A|8933|family with sequence similarity 127, member A##BC106076|FAM127A|8933|family with sequence similarity 127, member A##BC002385|FAM127A|8933|family with sequence similarity 127, member A##BC002410|FAM127A|8933|family with sequence similarity 127, member A	0.946099	CTCF.p2:7:0.946
chr10	71404444	71404556	reg1007633.p2	11.307	+	NM_145306 BC013587	-14493	+	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	-71400	-	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	-193167	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	157157	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	157189	+	TSC_hg19_v1_chr10_+_71562275 M59217	157791	+	NM_145306|C10orf35|219738|chromosome 10 open reading frame 35##BC013587|C10orf35|219738|chromosome 10 open reading frame 35##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##M59217|COL13A1|1305|collagen, type XIII, alpha 1	0.999047	CTCF.p2:-9:0.999
chr15	34816058	34816193	reg1009855.p1	11.307	+	BC032774 BC093673 BC104800 BC143254 AK097551 NM_181077	-134180	-	AF529233 TSC_hg19_v1_chr15_-_34659398 BC144236 AK290273 AK308910 AL832237 BC092463 NM_153613 BC048430 AY734233 AF542964	-156545	-	AF482429 NM_175741 BC114518 BC114567 BC033392 AK098568	-177997	+	BC032774 BC093673 BC104800 BC143254 AK097551 NM_001023567	12041	-	BX647673 TSC_hg19_v1_chr15_-_34875067	58944	-	BC069131 BC069339 NM_020660 BC112110 BC112114 BC143788	230609	-	BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_181077|GOLGA8A|23015|golgin A8 family, member A##AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AF482429|C15orf55|256646|chromosome 15 open reading frame 55##NM_175741|C15orf55|256646|chromosome 15 open reading frame 55##BC114518|C15orf55|256646|chromosome 15 open reading frame 55##BC114567|C15orf55|256646|chromosome 15 open reading frame 55##BC033392|C15orf55|256646|chromosome 15 open reading frame 55##AK098568|C15orf55|256646|chromosome 15 open reading frame 55##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_001023567|GOLGA8B|440270|golgin A8 family, member B##BX647673|GOLGA8B|440270|golgin A8 family, member B##BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa##BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa##NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa##BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa	1.12324	CTCF.p2:-12:1.000
chr19	45348125	45348254	reg1008640.p1	11.307	+	TSC_hg19_v1_chr19_+_45312359 BC014065 NM_001013257 NM_005581 X83425 BC036745 X80026 BC050450 AB463427 CU690688 HE572749	-35833	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	-67033	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	-96208	+	NM_001042724 NM_002856 TSC_hg19_v1_chr19_+_45349482	1253	+	TSC_hg19_v1_chr19_+_45349564 AK291330	1374	+	BC003091 TSC_hg19_v1_chr19_+_45349584 AF058448 AB528739 DQ891829 DQ895015 CR456818 X80038 CU678368	1494	+	NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##NM_001042724|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##NM_002856|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##AK291330|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##BC003091|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##AF058448|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##DQ891829|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##DQ895015|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##CR456818|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##X80038|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)	0.983911	CTCF.p2:9:0.984
chr8	37853916	37854039	reg1009679.p1	11.305	+	AY487247 FJ170286 FJ170287 BC075017 AK313857 X70811 AK309919 AK293033 NM_000025	-29893	-	S53291 TSC_hg19_v1_chr8_-_37822825	-31158	-	BC029504 NM_152413	-56331	-	TSC_hg19_v1_chr8_+_37888059 NM_004095 BC004459 AB044548 AK312011 BC058073 DQ890570 DQ893731 AB590574 BT007162 CR456769 L36055	34063	+	NM_004674 TSC_hg19_v1_chr8_+_37963033	109044	+	TSC_hg19_v1_chr8_+_37963046 AK291750 AK293699 AB020982 AF056718 AK298483 AB385056 AK311336	109107	+	AY487247|ADRB3|155|adrenergic, beta-3-, receptor##FJ170286|ADRB3|155|adrenergic, beta-3-, receptor##FJ170287|ADRB3|155|adrenergic, beta-3-, receptor##BC075017|ADRB3|155|adrenergic, beta-3-, receptor##AK313857|ADRB3|155|adrenergic, beta-3-, receptor##X70811|ADRB3|155|adrenergic, beta-3-, receptor##AK309919|ADRB3|155|adrenergic, beta-3-, receptor##AK293033|ADRB3|155|adrenergic, beta-3-, receptor##NM_000025|ADRB3|155|adrenergic, beta-3-, receptor##S53291|ADRB3|155|adrenergic, beta-3-, receptor##BC029504|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##NM_152413|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##NM_004095|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##BC004459|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##AB044548|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##AK312011|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##BC058073|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##DQ890570|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##DQ893731|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##BT007162|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##CR456769|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##L36055|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##NM_004674|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK291750|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK293699|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AB020982|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AF056718|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK298483|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK311336|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)	0.980693	CTCF.p2:-17:0.981
chr12	52766467	52766565	reg1008069.p1	11.304	+	X99140 NM_002283	-5235	-	BC126935 BC128063 BC069546 X99141 AK314904 NM_002282	-51356	-	NM_002284 BC069585 CU686916 X99142	-70838	+	AJ628420 BC069647 NM_033045 AK314030	12882	-	AB527176 AJ628419 NM_033033	33603	-	Y17282 AK225962 NM_004693	61591	-	X99140|KRT85|3891|keratin 85##NM_002283|KRT85|3891|keratin 85##BC126935|KRT83|3889|keratin 83##BC128063|KRT83|3889|keratin 83##BC069546|KRT83|3889|keratin 83##X99141|KRT83|3889|keratin 83##AK314904|KRT83|3889|keratin 83##NM_002282|KRT83|3889|keratin 83##NM_002284|KRT86|3892|keratin 86##BC069585|KRT86|3892|keratin 86##X99142|KRT86|3892|keratin 86##AJ628420|KRT84|3890|keratin 84##BC069647|KRT84|3890|keratin 84##NM_033045|KRT84|3890|keratin 84##AK314030|KRT84|3890|keratin 84##AJ628419|KRT82|3888|keratin 82##NM_033033|KRT82|3888|keratin 82##Y17282|KRT75|9119|keratin 75##AK225962|KRT75|9119|keratin 75##NM_004693|KRT75|9119|keratin 75	1.010392	CTCF.p2:3:1.000
chr19	44059473	44059574	reg1007680.p2	11.304	+	TSC_hg19_v1_chr19_+_44037567 BC043611 NM_174945 AK301820	-22011	+	TSC_hg19_v1_chr19_-_44031351 AM392804 AB463613 AK309880 BC008250 AK315346 D83198 NM_014297	-28162	-	BC029299 NM_198850 BC070094	-50488	-	CR456728 AB384718 BC023593 TSC_hg19_v1_chr19_-_44079680 AB208781	20125	-	AK293542 TSC_hg19_v1_chr19_-_44079716 AK300163 AK315332 NM_006297	20204	-	AK296854 NM_001193621	21428	+	BC043611|ZNF575|284346|zinc finger protein 575##NM_174945|ZNF575|284346|zinc finger protein 575##AK301820|ZNF575|284346|zinc finger protein 575##AM392804|ETHE1|23474|ethylmalonic encephalopathy 1##AK309880|ETHE1|23474|ethylmalonic encephalopathy 1##BC008250|ETHE1|23474|ethylmalonic encephalopathy 1##AK315346|ETHE1|23474|ethylmalonic encephalopathy 1##D83198|ETHE1|23474|ethylmalonic encephalopathy 1##NM_014297|ETHE1|23474|ethylmalonic encephalopathy 1##BC029299|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##NM_198850|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##BC070094|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##CR456728|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##BC023593|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##AB208781|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##AK293542|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##AK300163|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##AK315332|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##NM_006297|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##AK296854|LOC390940|390940|uncharacterized protein ENSP00000244321##NM_001193621|LOC390940|390940|uncharacterized protein ENSP00000244321	0.093886	
chr22	41318862	41318991	reg1007897.p1	11.304	+	AB528124 CU013018 CU013306 CR456468 BC112135 AF085232 NM_145174	-60863	-	TSC_hg19_v1_chr22_+_41253101 NM_001204827 NM_022098 AK301635 BX648018 BC037424 AL365514 BC005331 BC001681 BC004989 AX721172 AK313770 AL834310 CR456442 BC001208 BC023654 BC045166 BC053556 BC011632 AB527238 CR457396 CU013040 CU013328 CU674830	-65806	+	TSC_hg19_v1_chr22_-_41252691 NM_003932	-66236	-	TSC_hg19_v1_chr22_+_41347364 NM_014248	28422	+	TSC_hg19_v1_chr22_+_41347389 BC017370 CR456560 AK315722 AF140598 BC001466 AB590096 AF142059 CU013160 CU013448 CU674722 AF085906 AY099360	28480	+	TSC_hg19_v1_chr22_+_41487787 U01877	168864	+	CU013018|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##CU013306|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##CR456468|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##BC112135|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##AF085232|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##NM_145174|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##NM_001204827|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##NM_022098|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##AK301635|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BX648018|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC037424|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##AL365514|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC005331|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC001681|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC004989|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##AK313770|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##AL834310|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##CR456442|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC001208|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC023654|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC045166|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC053556|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC011632|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##CR457396|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##NM_003932|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##NM_014248|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##BC017370|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CR456560|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AK315722|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF140598|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##BC001466|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF142059|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CU013160|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CU013448|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF085906|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AY099360|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##U01877|EP300|2033|E1A binding protein p300	0.99724	CTCF.p2:-17:0.997
chr8	12288474	12288605	reg1011132.p1	11.304	+	DQ012022 NM_001037804 NM_001195257	-112715	-	AK309984 BC062615 BC072459 BC098427 BC048297 AK098138 AK308513 AK297741 AK308439 BC085016 NM_001083537 AK291001 AK298940	-236952	-	AY509884 NM_201402	-292271	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	5304	-	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	5365	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	324465	-	DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##BC062615|FAM86B1|85002|family with sequence similarity 86, member B1##BC098427|FAM86B1|85002|family with sequence similarity 86, member B1##BC048297|FAM86B1|85002|family with sequence similarity 86, member B1##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##NM_001083537|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##NM_201402|USP17L2|377630|ubiquitin specific peptidase 17-like 2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1	0.993599	CTCF.p2:-2:0.994
chr11	18797359	18797472	reg1008120.p1	11.303	+	BC115396 BC115397 AK095113 NM_173588	-49668	-	TSC_hg19_v1_chr11_+_18720347 BC035692 NM_153347	-77067	+	TSC_hg19_v1_chr11_+_18720321 AK074600	-77112	+	AK294374 BC064807 AK316270 AK294673 BC039897 AK295604 AK090923 AX746685 AL832541 NM_001039970 NM_006906 NM_032781 TSC_hg19_v1_chr11_-_18813404	15850	-	BC096835 NM_147199	159131	-	BC063450 NM_054030	284812	-	BC115396|IGSF22|283284|immunoglobulin superfamily, member 22##BC115397|IGSF22|283284|immunoglobulin superfamily, member 22##AK095113|IGSF22|283284|immunoglobulin superfamily, member 22##NM_173588|IGSF22|283284|immunoglobulin superfamily, member 22##BC035692|TMEM86A|144110|transmembrane protein 86A##NM_153347|TMEM86A|144110|transmembrane protein 86A##AK074600|TMEM86A|144110|transmembrane protein 86A##AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC096835|MRGPRX1|259249|MAS-related GPR, member X1##NM_147199|MRGPRX1|259249|MAS-related GPR, member X1##BC063450|MRGPRX2|117194|MAS-related GPR, member X2##NM_054030|MRGPRX2|117194|MAS-related GPR, member X2	0.997225	CTCF.p2:-1:0.997
chr19	47750764	47750889	reg1010187.p1	11.303	+	AB590880 AK298837 AF354654 AF354655 AF354656 NM_001127240 NM_001127241 NM_001127242	-14886	-	U82987 BC136481 TSC_hg19_v1_chr19_-_47734457 AF332558 NM_014417	-16481	-	TSC_hg19_v1_chr19_+_47634184 AB385085 DQ891751 DQ894932 CU676224 AF110956 BT007290	-116604	+	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	8935	+	TSC_hg19_v1_chr19_+_47759811 BC002787 BC009743	8992	+	TSC_hg19_v1_chr19_+_47778141 BC022076 BC045749 NM_178511 BC064510	27310	+	AK298837|BBC3|27113|BCL2 binding component 3##AF354654|BBC3|27113|BCL2 binding component 3##AF354655|BBC3|27113|BCL2 binding component 3##AF354656|BBC3|27113|BCL2 binding component 3##NM_001127240|BBC3|27113|BCL2 binding component 3##NM_001127241|BBC3|27113|BCL2 binding component 3##NM_001127242|BBC3|27113|BCL2 binding component 3##U82987|BBC3|27113|BCL2 binding component 3##BC136481|BBC3|27113|BCL2 binding component 3##AF332558|BBC3|27113|BCL2 binding component 3##NM_014417|BBC3|27113|BCL2 binding component 3##DQ891751|SAE1|10055|SUMO1 activating enzyme subunit 1##DQ894932|SAE1|10055|SUMO1 activating enzyme subunit 1##AF110956|SAE1|10055|SUMO1 activating enzyme subunit 1##BT007290|SAE1|10055|SUMO1 activating enzyme subunit 1##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9##BC002787|CCDC9|26093|coiled-coil domain containing 9##BC009743|CCDC9|26093|coiled-coil domain containing 9##BC022076|PRR24|255783|proline rich 24##BC045749|PRR24|255783|proline rich 24##NM_178511|PRR24|255783|proline rich 24##BC064510|PRR24|255783|proline rich 24	0.999317	CTCF.p2:6:0.999
chr4	168998297	168998429	reg1007803.p2	11.302	+	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	-842623	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	-842659	-	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	-842752	-	NM_007193 BC007320 AF196478 AJ238979 CU675613 EU176730	15406	+	TSC_hg19_v1_chr4_-_169239951 AK001649 BC038115 AK307404 NM_017631	241542	-	TSC_hg19_v1_chr4_-_169401573 AK096369	403217	-	AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_007193|ANXA10|11199|annexin A10##BC007320|ANXA10|11199|annexin A10##AF196478|ANXA10|11199|annexin A10##AJ238979|ANXA10|11199|annexin A10##EU176730|ANXA10|11199|annexin A10##AK001649|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##BC038115|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##AK307404|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##NM_017631|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##AK096369|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like	0.562552	CTCF.p2:6:0.563
chr5	141928461	141928624	reg1008013.p1	11.302	+	TSC_hg19_v1_chr5_-_141704587 AK096464 NM_001127496 NM_030964	-223908	-	BC125095 BC125096 TSC_hg19_v1_chr5_-_141704555 AF227516 AF227517	-224022	-	TSC_hg19_v1_chr5_+_141488389 AB097010 AB097037 BC004317	-440132	+	S67291 S67292 S67294 AB528663 X65778 X65779 M13361 NM_033137 X51943	65166	-	L01487 BC032697 NM_001144892	72360	-	M60516 NM_000800	137077	-	AK096464|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_001127496|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_030964|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125095|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125096|SPRY4|81848|sprouty homolog 4 (Drosophila)##AF227516|SPRY4|81848|sprouty homolog 4 (Drosophila)##AB097010|NDFIP1|80762|Nedd4 family interacting protein 1##AB097037|NDFIP1|80762|Nedd4 family interacting protein 1##BC004317|NDFIP1|80762|Nedd4 family interacting protein 1##S67291|FGF1|2246|fibroblast growth factor 1 (acidic)##S67292|FGF1|2246|fibroblast growth factor 1 (acidic)##S67294|FGF1|2246|fibroblast growth factor 1 (acidic)##X65778|FGF1|2246|fibroblast growth factor 1 (acidic)##X65779|FGF1|2246|fibroblast growth factor 1 (acidic)##M13361|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)##X51943|FGF1|2246|fibroblast growth factor 1 (acidic)##L01487|FGF1|2246|fibroblast growth factor 1 (acidic)##BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)##M60516|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)	1.586989	CTCF.p2:26:0.990	CTCF.p2:-74:0.596
chr12	97798437	97798566	reg1008152.p2	11.301	+	BC027605 NM_001135175	-497258	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-497470	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-1004184	-	TSC_hg19_v1_chr12_-_98897622 AK126817	1099126	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	1110866	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	1110906	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.926955	CTCF.p2:7:0.927
chr15	65032836	65032966	reg1009619.p1	11.301	+	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	-37432	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	-37499	-	BC119629 BC119630 BC148316 BC127630 TSC_hg19_v1_chr15_-_64995360 BC127631 AF242520 AF242521	-37541	-	BC131612 BC148208 AY369207 NM_194272 TSC_hg19_v1_chr15_-_65067789 AK127873	34845	-	BC137503 BC137504 TSC_hg19_v1_chr15_-_65117814 BC018978 AK026345 EU084033 NM_025049 AB185926 AB185927	84934	-	AK311036 NM_001195059 NM_025201 TSC_hg19_v1_chr15_+_65134113 AK096203 BC008744 AF494534	101206	+	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2##BC131612|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC148208|RBPMS2|348093|RNA binding protein with multiple splicing 2##AY369207|RBPMS2|348093|RNA binding protein with multiple splicing 2##NM_194272|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK127873|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC137503|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC137504|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC018978|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AK026345|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##EU084033|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_025049|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185926|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185927|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_001195059|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##NM_025201|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK096203|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC008744|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AF494534|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2	0.414559	CTCF.p2:-17:0.415
chr5	125675038	125675159	reg1008351.p1	11.301	+	BC131507 AB033107 BC151226 NM_020747	-1594310	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-2827216	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-2915954	-	NM_001146319 AK316288 AK300154	20716	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	83745	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	84089	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.999814	CTCF.p2:-5:1.000
chr9	126306420	126306537	reg1007989.p1	11.301	+	NM_173689 AK123000 DQ426866 AY720432	-187985	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-275590	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	-275658	-	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	385833	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	467405	+	TSC_hg19_v1_chr9_+_126774046 BC034458	467593	+	NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC034458|LHX2|9355|LIM homeobox 2	0.968238	CTCF.p2:-8:0.968
chr13	92001300	92001398	reg1008143.p1	11.300	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3676480	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5627910	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7544849	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	49555	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1878078	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3130477	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.997348	CTCF.p2:-19:0.997
chr19	15530084	15530190	reg1007658.p1	11.300	+	TSC_hg19_v1_chr19_-_15529834 NM_014371 AK295956	-303	-	DQ891853 DQ895043 TSC_hg19_v1_chr19_-_15529792 AB015332 AB025905 AJ243467 BC000713 AK001594 AK094736 AK225046 AK225291 AK310990	-362	-	TSC_hg19_v1_chr19_-_15490599 AK308251 AK303640 BC037270 Y11997 NM_005858	-39531	-	AK122890 TSC_hg19_v1_chr19_-_15543534	13408	-	AK131404 NM_021241 TSC_hg19_v1_chr19_-_15560872	30681	-	AK024488 TSC_hg19_v1_chr19_-_15575356 AK122587 NM_022904	45230	-	NM_014371|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK295956|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##DQ891853|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##DQ895043|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AB015332|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AB025905|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AJ243467|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##BC000713|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK001594|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK094736|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK225046|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK225291|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK310990|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK308251|AKAP8|10270|A kinase (PRKA) anchor protein 8##AK303640|AKAP8|10270|A kinase (PRKA) anchor protein 8##BC037270|AKAP8|10270|A kinase (PRKA) anchor protein 8##Y11997|AKAP8|10270|A kinase (PRKA) anchor protein 8##NM_005858|AKAP8|10270|A kinase (PRKA) anchor protein 8##AK122890|WIZ|58525|widely interspaced zinc finger motifs##AK131404|WIZ|58525|widely interspaced zinc finger motifs##NM_021241|WIZ|58525|widely interspaced zinc finger motifs##AK024488|RASAL3|64926|RAS protein activator like 3##AK122587|RASAL3|64926|RAS protein activator like 3##NM_022904|RASAL3|64926|RAS protein activator like 3	0.032869	
chr9	112980028	112980182	reg1005020.p1	11.300	+	NM_001012993	-9693	-	NM_001136562 AK300427	-92313	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	-169142	+	AF065241 AF276919 CR407665 AF313911 AY004872 AF085844 BC003377 J04026 BC054866 TSC_hg19_v1_chr9_-_113018788 X77584	38647	-	TSC_hg19_v1_chr9_-_113018817 BX647247 D28376 AK289508	38720	-	TSC_hg19_v1_chr9_-_113018882 NM_001244938 NM_003329	38794	-	NM_001012993|C9orf152|401546|chromosome 9 open reading frame 152##NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##AF065241|TXN|7295|thioredoxin##AF276919|TXN|7295|thioredoxin##CR407665|TXN|7295|thioredoxin##AF313911|TXN|7295|thioredoxin##AY004872|TXN|7295|thioredoxin##AF085844|TXN|7295|thioredoxin##BC003377|TXN|7295|thioredoxin##J04026|TXN|7295|thioredoxin##BC054866|TXN|7295|thioredoxin##X77584|TXN|7295|thioredoxin##BX647247|TXN|7295|thioredoxin##D28376|TXN|7295|thioredoxin##AK289508|TXN|7295|thioredoxin##NM_001244938|TXN|7295|thioredoxin##NM_003329|TXN|7295|thioredoxin	0.993121	CTCF.p2:8:0.993
chr1	154532110	154532261	reg1009604.p1	11.299	+	BC107057 AY112698 TSC_hg19_v1_chr1_-_154531132 AY948200 NM_017582	-1076	-	BC044864 NM_001098475 NM_182499	-57491	+	BC143765 BC117210 NM_001010846	-57661	-	TSC_hg19_v1_chr1_+_154540253 NM_000748 U62437	8068	+	TSC_hg19_v1_chr1_+_154540307 X53179 AK313470 BC075040 BC075041 Y08415	8225	+	NM_001193495 X79448	46590	-	BC107057|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY112698|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY948200|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##NM_017582|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##BC044864|TDRD10|126668|tudor domain containing 10##NM_001098475|TDRD10|126668|tudor domain containing 10##NM_182499|TDRD10|126668|tudor domain containing 10##BC143765|SHE|126669|Src homology 2 domain containing E##BC117210|SHE|126669|Src homology 2 domain containing E##NM_001010846|SHE|126669|Src homology 2 domain containing E##NM_000748|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##U62437|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##X53179|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##AK313470|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##BC075040|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##BC075041|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##Y08415|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##NM_001193495|ADAR|103|adenosine deaminase, RNA-specific##X79448|ADAR|103|adenosine deaminase, RNA-specific	0.569913	CTCF.p2:-26:0.570
chr12	7741479	7741578	reg1005914.p1	11.299	+	DQ058615 TSC_hg19_v1_chr12_-_7656374 BC051281 AK226017 Z22968 Z22969 Z22970 Z22971 NM_004244 NM_203416	-85178	-	GQ397482 AY358856 AK303372 AF264014 NM_174941 BC104962 BC104964	-144791	-	NM_001080454	-284601	+	U72890 L25877 U72891 BC101405 BC101404 BC101972 BC096158 BC096159 BC096160 BC096161 BC101973 BC144708 NM_001644	76956	-	CU689052 DQ892661 DQ895901 AF110641 AF263538 NM_020634 BC030959 AY358875	106828	-	AY317075 NM_199286 BC125145	122545	+	DQ058615|CD163|9332|CD163 molecule##BC051281|CD163|9332|CD163 molecule##AK226017|CD163|9332|CD163 molecule##Z22968|CD163|9332|CD163 molecule##Z22969|CD163|9332|CD163 molecule##Z22970|CD163|9332|CD163 molecule##Z22971|CD163|9332|CD163 molecule##NM_004244|CD163|9332|CD163 molecule##NM_203416|CD163|9332|CD163 molecule##GQ397482|CD163L1|283316|CD163 molecule-like 1##AK303372|CD163L1|283316|CD163 molecule-like 1##AF264014|CD163L1|283316|CD163 molecule-like 1##NM_174941|CD163L1|283316|CD163 molecule-like 1##BC104962|CD163L1|283316|CD163 molecule-like 1##BC104964|CD163L1|283316|CD163 molecule-like 1##NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4##U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##DQ892661|GDF3|9573|growth differentiation factor 3##DQ895901|GDF3|9573|growth differentiation factor 3##AF110641|GDF3|9573|growth differentiation factor 3##AF263538|GDF3|9573|growth differentiation factor 3##NM_020634|GDF3|9573|growth differentiation factor 3##BC030959|GDF3|9573|growth differentiation factor 3##AY358875|GDF3|9573|growth differentiation factor 3##AY317075|DPPA3|359787|developmental pluripotency associated 3##NM_199286|DPPA3|359787|developmental pluripotency associated 3##BC125145|STELLAR|400206|developmental pluripotency associated 3 pseudogene	0.694186	CTCF.p2:-6:0.694
chr16	66981215	66981339	reg1009525.p1	11.299	+	AM392781 AB527125 DQ893022 DQ896756 BC098417 BC071874 TSC_hg19_v1_chr16_+_66969468 AK222724 Y09616 D50579 U60553	-11822	+	TSC_hg19_v1_chr16_+_66968390 AL713761	-12884	+	TSC_hg19_v1_chr16_+_66968388 AK095522	-12900	+	TSC_hg19_v1_chr16_+_66995159 AK097538 NM_001185177 NM_024922 BC053670 AK000105 AY358609	13875	+	AK025389 NM_001185176	20100	+	AK293061 NM_173815 AK296064	41252	+	AM392781|CES2|8824|carboxylesterase 2##DQ893022|CES2|8824|carboxylesterase 2##DQ896756|CES2|8824|carboxylesterase 2##BC098417|CES2|8824|carboxylesterase 2##BC071874|CES2|8824|carboxylesterase 2##AK222724|CES2|8824|carboxylesterase 2##Y09616|CES2|8824|carboxylesterase 2##D50579|CES2|8824|carboxylesterase 2##U60553|CES2|8824|carboxylesterase 2##AL713761|CES2|8824|carboxylesterase 2##AK095522|CES2|8824|carboxylesterase 2##AK097538|CES3|23491|carboxylesterase 3##NM_001185177|CES3|23491|carboxylesterase 3##NM_024922|CES3|23491|carboxylesterase 3##BC053670|CES3|23491|carboxylesterase 3##AK000105|CES3|23491|carboxylesterase 3##AY358609|CES3|23491|carboxylesterase 3##AK025389|CES3|23491|carboxylesterase 3##NM_001185176|CES3|23491|carboxylesterase 3##AK293061|CES4A|283848|carboxylesterase 4A##NM_173815|CES4A|283848|carboxylesterase 4A##AK296064|CES4A|283848|carboxylesterase 4A	0.999709	CTCF.p2:-15:1.000
chr20	44642883	44643014	reg1005994.p2	11.299	+	TSC_hg19_v1_chr20_+_44637546 AK298246 AK301446 AK311648 AK313137 AK316145 J05070 NM_004994 AK303080 BC006093 DQ896791 EU176415 AB528343 CU675241	-5396	+	TSC_hg19_v1_chr20_-_44600992 AK296989	-41955	-	TSC_hg19_v1_chr20_-_44600828 AF395833 BC041331 BC142981 NM_022095	-42138	-	TSC_hg19_v1_chr20_+_44650321 NM_001134771	7372	+	TSC_hg19_v1_chr20_+_44657824 NM_020708 AK098371	14875	+	TSC_hg19_v1_chr20_+_44657861 AK289758 AK296331 AK294059 BC132668 BC132670 AK295096 AF208159 AB033002	14983	+	AK298246|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK301446|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK313137|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK316145|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##J05070|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##NM_004994|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK303080|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##BC006093|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##DQ896791|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##EU176415|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK296989|ZNF335|63925|zinc finger protein 335##AF395833|ZNF335|63925|zinc finger protein 335##BC041331|ZNF335|63925|zinc finger protein 335##BC142981|ZNF335|63925|zinc finger protein 335##NM_022095|ZNF335|63925|zinc finger protein 335##NM_001134771|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##NM_020708|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK098371|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK289758|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK296331|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK294059|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC132668|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC132670|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK295096|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AF208159|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AB033002|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5	0.890456	CTCF.p2:-9:0.890
chr2	219968971	219969100	reg1010416.p1	11.299	+	BC136587 BC136588 NM_002181	-43798	-	AK127189 AK302678 AK302688 BC031585 NM_152389 NM_194302 BC047637	-62793	-	AF166331 NM_005209 BC006285 NM_057093 NM_057094	-110912	-	TSC_hg19_v1_chr2_-_220025558 BC012732 AK022672 AJ972687 BC030986 NM_024782	56504	-	DQ891019 DQ894199 CU688862 AK091919 BC030243 AK298256 AK298277 AK055730 NM_001144889 NM_001144890 NM_144712	65726	-	CR457401 CU674686 AK311656 TSC_hg19_v1_chr2_-_220041648 BC001393 AK314975 AK075274 BC012821 AY007160 NM_015680	72592	-	BC136587|IHH|3549|Indian hedgehog##BC136588|IHH|3549|Indian hedgehog##NM_002181|IHH|3549|Indian hedgehog##AK127189|CCDC108|255101|coiled-coil domain containing 108##AK302678|CCDC108|255101|coiled-coil domain containing 108##AK302688|CCDC108|255101|coiled-coil domain containing 108##BC031585|CCDC108|255101|coiled-coil domain containing 108##NM_152389|CCDC108|255101|coiled-coil domain containing 108##NM_194302|CCDC108|255101|coiled-coil domain containing 108##BC047637|CCDC108|255101|coiled-coil domain containing 108##AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2##BC012732|NHEJ1|79840|nonhomologous end-joining factor 1##AK022672|NHEJ1|79840|nonhomologous end-joining factor 1##AJ972687|NHEJ1|79840|nonhomologous end-joining factor 1##BC030986|NHEJ1|79840|nonhomologous end-joining factor 1##NM_024782|NHEJ1|79840|nonhomologous end-joining factor 1##DQ891019|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##DQ894199|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##BC030243|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298256|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298277|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK055730|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144889|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144890|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_144712|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##CR457401|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC001393|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK314975|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK075274|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC012821|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AY007160|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##NM_015680|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1	0.367768	CTCF.p2:3:0.368
chr6	6759539	6759665	reg1008927.p1	11.299	+	BC039678 TSC_hg19_v1_chr6_+_6725205	-34441	+	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	-170652	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-438692	-	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	348224	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	348433	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	348621	+	NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1	0.795444	CTCF.p2:-3:0.795
chr15	75242847	75242966	reg1009559.p1	11.298	+	TSC_hg19_v1_chr15_-_75230386 AK026623 BC024240 NM_004255	-12466	-	CR407649 DQ987236 DQ987237 DQ893584 DQ896832 TSC_hg19_v1_chr15_-_75230377 M22760 AK026615	-12537	-	NM_020447	-43445	-	CU675593 AY034074 BC002497 BC007270 TSC_hg19_v1_chr15_-_75249114	6118	-	AK000381 NM_017793	6868	-	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	45001	+	AK026623|COX5A|9377|cytochrome c oxidase subunit Va##BC024240|COX5A|9377|cytochrome c oxidase subunit Va##NM_004255|COX5A|9377|cytochrome c oxidase subunit Va##CR407649|COX5A|9377|cytochrome c oxidase subunit Va##DQ987236|COX5A|9377|cytochrome c oxidase subunit Va##DQ987237|COX5A|9377|cytochrome c oxidase subunit Va##DQ893584|COX5A|9377|cytochrome c oxidase subunit Va##DQ896832|COX5A|9377|cytochrome c oxidase subunit Va##M22760|COX5A|9377|cytochrome c oxidase subunit Va##AK026615|COX5A|9377|cytochrome c oxidase subunit Va##NM_020447|C15orf17|57184|chromosome 15 open reading frame 17##AY034074|RPP25|54913|ribonuclease P/MRP 25kDa subunit##BC002497|RPP25|54913|ribonuclease P/MRP 25kDa subunit##BC007270|RPP25|54913|ribonuclease P/MRP 25kDa subunit##AK000381|RPP25|54913|ribonuclease P/MRP 25kDa subunit##NM_017793|RPP25|54913|ribonuclease P/MRP 25kDa subunit##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5	0.256181	CTCF.p2:0:0.256
chr17	46048137	46048267	reg1008519.p1	11.298	+	BC002865 NM_024320 TSC_hg19_v1_chr17_-_46035208 AK309589	-13020	-	TSC_hg19_v1_chr17_+_46019041 AF468030	-29156	+	NM_018129 TSC_hg19_v1_chr17_+_46018965 AK001397 AK303665 AK303792 AK223242 AK303536 BC006525	-29258	+	AK223387 NM_176096 TSC_hg19_v1_chr17_+_46048452	230	+	TSC_hg19_v1_chr17_+_46048471 AF217982 AK023722	267	+	AF343090 TSC_hg19_v1_chr17_+_46048487 AF110322 AK225274 BC072435 AB062433 BC009957	292	+	BC002865|PRR15L|79170|proline rich 15-like##NM_024320|PRR15L|79170|proline rich 15-like##AK309589|PRR15L|79170|proline rich 15-like##AF468030|PNPO|55163|pyridoxamine 5'-phosphate oxidase##NM_018129|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK001397|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK303665|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK303792|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK223242|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK303536|PNPO|55163|pyridoxamine 5'-phosphate oxidase##BC006525|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK223387|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##NM_176096|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF217982|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK023722|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF343090|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF110322|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK225274|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC072435|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AB062433|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC009957|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3	0.0	
chr4	74459494	74459624	reg1007677.p2	11.298	+	AK290556 NM_001133 BC109020 BC109021 L35486	-112089	+	NM_001134 V01514 AK297669 TSC_hg19_v1_chr4_+_74301937 AK297674 AK314817 BC027881 DQ890942 DQ894103 CU693306	-157604	+	X51365 X51363 X51364 TSC_hg19_v1_chr4_+_74286879	-172697	+	AY217664 BC058835 NM_177532 AY217665 CR749283 AK126346 NM_201431	26660	-	NM_000584 Y00787 AK131067 AK311874 M17017 M26383 BC013615 AF043337 AB590232 DQ890564 DQ893727 BT007067 CR542151 Z11686	146739	+	NM_002993 AK311981 U81234 BC013744 DQ891500 DQ894692 AB463491	242810	+	AK290556|AFM|173|afamin##NM_001133|AFM|173|afamin##BC109020|AFM|173|afamin##BC109021|AFM|173|afamin##L35486|AFM|173|afamin##NM_001134|AFP|174|alpha-fetoprotein##V01514|AFP|174|alpha-fetoprotein##AK297669|AFP|174|alpha-fetoprotein##AK297674|AFP|174|alpha-fetoprotein##AK314817|AFP|174|alpha-fetoprotein##BC027881|AFP|174|alpha-fetoprotein##DQ890942|AFP|174|alpha-fetoprotein##DQ894103|AFP|174|alpha-fetoprotein##X51365|ALB|213|albumin##X51363|ALB|213|albumin##X51364|ALB|213|albumin##AY217664|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##BC058835|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_177532|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AY217665|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##CR749283|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK126346|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_201431|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_000584|IL8|3576|interleukin 8##Y00787|IL8|3576|interleukin 8##AK131067|IL8|3576|interleukin 8##AK311874|IL8|3576|interleukin 8##M17017|IL8|3576|interleukin 8##M26383|IL8|3576|interleukin 8##BC013615|IL8|3576|interleukin 8##DQ890564|IL8|3576|interleukin 8##DQ893727|IL8|3576|interleukin 8##BT007067|IL8|3576|interleukin 8##CR542151|IL8|3576|interleukin 8##Z11686|IL8|3576|interleukin 8##NM_002993|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##AK311981|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##U81234|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##BC013744|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ891500|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ894692|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)	0.999353	CTCF.p2:-4:0.999
chr14	55821442	55821556	reg1007603.p1	11.297	+	NM_152231	-82628	+	TSC_hg19_v1_chr14_+_55738114 BX248268 BC095482	-83341	+	NM_017943 AK092879 AX747787 TSC_hg19_v1_chr14_+_55738097 BC109120 BC109121	-83440	+	BC028015 AB587548 AK292810 TSC_hg19_v1_chr14_-_55878549 BC109089 BC109090 AK131251 NM_014924	57057	-	AY457923 HQ258397 NM_199047 DQ448593 BC117185 BC117159	85798	-	BX248296 TSC_hg19_v1_chr14_-_56046835 AK124927	225317	-	NM_152231|FBXO34|55030|F-box protein 34##BX248268|FBXO34|55030|F-box protein 34##BC095482|FBXO34|55030|F-box protein 34##NM_017943|FBXO34|55030|F-box protein 34##AK092879|FBXO34|55030|F-box protein 34##BC109120|FBXO34|55030|F-box protein 34##BC109121|FBXO34|55030|F-box protein 34##BC028015|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##AK292810|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##BC109089|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##BC109090|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##AK131251|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##NM_014924|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##AY457923|TBPL2|387332|TATA box binding protein like 2##HQ258397|TBPL2|387332|TATA box binding protein like 2##NM_199047|TBPL2|387332|TATA box binding protein like 2##DQ448593|TBPL2|387332|TATA box binding protein like 2##BC117185|TBPL2|387332|TATA box binding protein like 2##BC117159|TBPL2|387332|TATA box binding protein like 2##BX248296|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##AK124927|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)	0.077496	
chr19	39127572	39127702	reg1007504.p1	11.297	+	TSC_hg19_v1_chr19_+_39109863 BC001031 AK026531 AF315506 CU674510	-17760	+	AF109355 TSC_hg19_v1_chr19_+_39109847	-17790	+	TSC_hg19_v1_chr19_+_39109833 AK316344 AK301035 AK289554	-17799	+	TSC_hg19_v1_chr19_+_39138266 NM_004924	10629	+	AK309363 TSC_hg19_v1_chr19_+_39138288	10652	+	TSC_hg19_v1_chr19_+_39138308 U48734	10672	+	BC001031|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK026531|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF315506|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF109355|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK316344|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK301035|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK289554|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##NM_004924|ACTN4|81|actinin, alpha 4##AK309363|ACTN4|81|actinin, alpha 4##U48734|ACTN4|81|actinin, alpha 4	0.991993	CTCF.p2:4:0.992
chr10	81806758	81806879	reg1010442.p1	11.296	+	BC022318 NM_003019	-97958	-	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	-436114	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	-486667	-	TSC_hg19_v1_chr10_+_81838420 AK222536 AK023325 BC022252 NM_025125 CR457310	31618	+	BC066348 BC090922 NM_001012973	85439	+	BC117332 BC117334 TSC_hg19_v1_chr10_+_81892485	85639	+	BC022318|SFTPD|6441|surfactant protein D##NM_003019|SFTPD|6441|surfactant protein D##AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##AK222536|FAM213A|80195|family with sequence similarity 213, member A##AK023325|FAM213A|80195|family with sequence similarity 213, member A##BC022252|FAM213A|80195|family with sequence similarity 213, member A##NM_025125|FAM213A|80195|family with sequence similarity 213, member A##CR457310|FAM213A|80195|family with sequence similarity 213, member A##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9##BC117332|PLAC9|219348|placenta-specific 9##BC117334|PLAC9|219348|placenta-specific 9	0.989849	CTCF.p2:1:0.958
chr1	145713699	145713834	reg1008241.p1	11.296	+	AL079314 TSC_hg19_v1_chr1_+_145663283	-50547	+	TSC_hg19_v1_chr1_+_145611124 AF419857 NM_014455 AK290749 AF542552 BC054049 BC064903 CU691082 EU446627 EU446791 GQ129333 GQ129334	-102586	+	TSC_hg19_v1_chr1_-_145610937 BC004424	-102831	-	AF060981 BC014465 NM_007053 AK128370	1821	-	NM_001201325 NM_001201326 NM_002614 TSC_hg19_v1_chr1_+_145727703	13918	+	TSC_hg19_v1_chr1_+_145727712 AK313100 AK298269 BC006496 BC006518 AF012281	13953	+	AL079314|RNF115|27246|ring finger protein 115##AF419857|RNF115|27246|ring finger protein 115##NM_014455|RNF115|27246|ring finger protein 115##AK290749|RNF115|27246|ring finger protein 115##AF542552|RNF115|27246|ring finger protein 115##BC054049|RNF115|27246|ring finger protein 115##BC064903|RNF115|27246|ring finger protein 115##EU446627|RNF115|27246|ring finger protein 115##EU446791|RNF115|27246|ring finger protein 115##GQ129333|RNF115|27246|ring finger protein 115##GQ129334|RNF115|27246|ring finger protein 115##BC004424|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)##AF060981|CD160|11126|CD160 molecule##BC014465|CD160|11126|CD160 molecule##NM_007053|CD160|11126|CD160 molecule##AK128370|CD160|11126|CD160 molecule##NM_001201325|PDZK1|5174|PDZ domain containing 1##NM_001201326|PDZK1|5174|PDZ domain containing 1##NM_002614|PDZK1|5174|PDZ domain containing 1##AK313100|PDZK1|5174|PDZ domain containing 1##AK298269|PDZK1|5174|PDZ domain containing 1##BC006496|PDZK1|5174|PDZ domain containing 1##BC006518|PDZK1|5174|PDZ domain containing 1##AF012281|PDZK1|5174|PDZ domain containing 1	0.997466	CTCF.p2:-12:0.997
chr14	72490847	72490976	reg1009737.p1	11.296	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-91045	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-91758	+	AK294895 NM_001204423	-92095	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	869897	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	902224	+	AK098542 AF311602 NM_178441	962746	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.976657	CTCF.p2:-12:0.977
chr17	71187712	71187855	reg1008150.p1	11.296	+	TSC_hg19_v1_chr17_+_71161148 AK290745 BC019610 NM_001050 AK313866	-26639	+	TSC_hg19_v1_chr17_-_71088832 NM_001159770 NM_139177	-98935	-	BC035631 TSC_hg19_v1_chr17_-_71088831	-98952	-	TSC_hg19_v1_chr17_+_71189175 NM_018714	1377	+	TSC_hg19_v1_chr17_+_71189196 AK098224	1408	+	TSC_hg19_v1_chr17_+_71189203 DQ896029 AB462989 BC021985 AB037802	1434	+	AK290745|SSTR2|6752|somatostatin receptor 2##BC019610|SSTR2|6752|somatostatin receptor 2##NM_001050|SSTR2|6752|somatostatin receptor 2##AK313866|SSTR2|6752|somatostatin receptor 2##NM_001159770|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##NM_139177|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##NM_018714|COG1|9382|component of oligomeric golgi complex 1##AK098224|COG1|9382|component of oligomeric golgi complex 1##DQ896029|COG1|9382|component of oligomeric golgi complex 1##BC021985|COG1|9382|component of oligomeric golgi complex 1##AB037802|COG1|9382|component of oligomeric golgi complex 1	0.757643	CTCF.p2:2:0.758
chr2	225866881	225867025	reg1008423.p1	11.296	+	TSC_hg19_v1_chr2_-_225811768 EU236710	-55199	-	TSC_hg19_v1_chr2_-_225450116 NM_003590	-416833	-	TSC_hg19_v1_chr2_-_225450056 BC039598	-416878	-	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	40395	-	NM_020864 BC131727 AB040919	398692	+	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	1796526	-	EU236710|DOCK10|55619|dedicator of cytokinesis 10##NM_003590|CUL3|8452|cullin 3##BC039598|CUL3|8452|cullin 3##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1	0.99848	CTCF.p2:9:0.998
chr1	12679979	12680088	reg1007293.p1	11.295	+	DQ426869 DQ893006 DQ896252 CU678154 AF061741 AK222593 BC002730 TSC_hg19_v1_chr1_-_12677700 AK310202 AY358093 AK309282 AK312961 BX648476 NM_004753	-2450	-	TSC_hg19_v1_chr1_+_12403045 AK057675	-276963	+	TSC_hg19_v1_chr1_+_12290088 NM_015378 NM_018156 AJ608774 AJ608775 AL162331	-389926	+	NM_001013630	24532	+	AK127828 NM_001103169 NM_001103170	96084	+	BC029894 NM_152290 AK026705 AK298760	126133	+	DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK057675|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_015378|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_018156|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608774|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608775|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AL162331|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_001013630|AADACL4|343066|arylacetamide deacetylase-like 4##AK127828|AADACL3|126767|arylacetamide deacetylase-like 3##NM_001103169|AADACL3|126767|arylacetamide deacetylase-like 3##NM_001103170|AADACL3|126767|arylacetamide deacetylase-like 3##BC029894|C1orf158|93190|chromosome 1 open reading frame 158##NM_152290|C1orf158|93190|chromosome 1 open reading frame 158##AK026705|C1orf158|93190|chromosome 1 open reading frame 158##AK298760|C1orf158|93190|chromosome 1 open reading frame 158	0.220591	CTCF.p2:7:0.221
chr13	40190345	40190478	reg1008849.p2	11.295	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-13049	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-13084	-	AF098807 BC017824 TSC_hg19_v1_chr13_-_40177268	-13167	-	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	39450	+	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	1050301	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	1154881	-	NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##AF098807|LHFP|10186|lipoma HMGIC fusion partner##BC017824|LHFP|10186|lipoma HMGIC fusion partner##AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31	0.421523	CTCF.p2:12:0.422
chr16	3179655	3179782	reg1010549.p1	11.294	+	TSC_hg19_v1_chr16_+_3162586 NM_001042428 NM_003456 AK313009 AF060865 BC002810	-17123	+	TSC_hg19_v1_chr16_-_3149286 AK074736	-30436	-	BC114452 AK027455 NM_032805	-36869	-	TSC_hg19_v1_chr16_-_3184862 AF098968	5153	-	AF017433 TSC_hg19_v1_chr16_+_3184980	5234	+	TSC_hg19_v1_chr16_+_3185058 NM_004220	5334	+	NM_001042428|ZNF205|7755|zinc finger protein 205##NM_003456|ZNF205|7755|zinc finger protein 205##AK313009|ZNF205|7755|zinc finger protein 205##AF060865|ZNF205|7755|zinc finger protein 205##BC002810|ZNF205|7755|zinc finger protein 205##AK074736|ZSCAN10|84891|zinc finger and SCAN domain containing 10##BC114452|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AK027455|ZSCAN10|84891|zinc finger and SCAN domain containing 10##NM_032805|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AF017433|ZNF213|7760|zinc finger protein 213##NM_004220|ZNF213|7760|zinc finger protein 213	0.990071	CTCF.p2:1:0.990
chr2	56976423	56976538	reg1007565.p1	11.294	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-563571	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-564714	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-565275	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	1297274	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	1297508	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	1492002	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.994345	CTCF.p2:15:0.994
chr4	69364278	69364402	reg1009603.p1	11.294	+	AK313859 NM_014058 AF064819 AK292787 AY359017 BC113412 BC113414	-51154	+	TSC_hg19_v1_chr4_-_69215804 BC041119 AK056430 NM_001031732 NM_133370	-148578	-	BC126195 AK310210 AL833167 BX537945 AK290904 NM_182502	-252968	-	AF548389 NM_001077 U59209	69889	-	U06641 U08854 AF548389 AK289419 AF180322 BC171879 NM_001076	172063	-	TSC_hg19_v1_chr4_+_69681710 BC113649 AK222839 AK222872 AK292738 AK298432 NM_001075 NM_001144767 X63359	317378	+	AK313859|TMPRSS11E|28983|transmembrane protease, serine 11E##NM_014058|TMPRSS11E|28983|transmembrane protease, serine 11E##AF064819|TMPRSS11E|28983|transmembrane protease, serine 11E##AK292787|TMPRSS11E|28983|transmembrane protease, serine 11E##AY359017|TMPRSS11E|28983|transmembrane protease, serine 11E##BC113412|TMPRSS11E|28983|transmembrane protease, serine 11E##BC113414|TMPRSS11E|28983|transmembrane protease, serine 11E##BC041119|YTHDC1|91746|YTH domain containing 1##AK056430|YTHDC1|91746|YTH domain containing 1##NM_001031732|YTHDC1|91746|YTH domain containing 1##NM_133370|YTHDC1|91746|YTH domain containing 1##BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B##AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B##AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B##BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B##AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B##NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B##AF548389|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##NM_001077|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17##U59209|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17##U06641|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##U08854|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##AF548389|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##AK289419|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##AF180322|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##BC171879|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##NM_001076|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##BC113649|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK222839|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK222872|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK292738|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK298432|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##NM_001075|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##NM_001144767|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10	0.992451	CTCF.p2:-20:0.992
chr12	49908010	49908102	reg1006589.p1	11.293	+	TSC_hg19_v1_chr12_+_49761253 BC017767 AL833614 BC048299 AK292334 AK023202 BX648916 BC032441	-146662	+	TSC_hg19_v1_chr12_+_49760679 AK095582 NM_023071	-147367	+	BC033236 NM_024902	-167016	+	TSC_hg19_v1_chr12_+_49932842 AB033108 NM_012284 BC144254 BC150602 AB022696 AB384589	24964	+	AY336730 NM_001012300	52165	-	TSC_hg19_v1_chr12_-_49961916 AK123187 BC011794 NM_006337 BX538079 AK308581	53862	-	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2##AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2##BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK095582|SPATS2|65244|spermatogenesis associated, serine-rich 2##NM_023071|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##AB033108|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##NM_012284|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC144254|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC150602|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AB022696|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AY336730|MCRS1|10445|microspherule protein 1##NM_001012300|MCRS1|10445|microspherule protein 1##BC011794|MCRS1|10445|microspherule protein 1##NM_006337|MCRS1|10445|microspherule protein 1##BX538079|MCRS1|10445|microspherule protein 1	0.998552	CTCF.p2:-2:0.999
chr18	22458405	22458521	reg1007634.p1	11.293	+	AF312230 BC069136 NM_001143828 NM_001160166 NM_021624 AB045370 BC112348 AB044934 AF307973 AF325356 AF329449 AJ298292 AY008280 AY136745 DQ835186 DQ835187	-417821	+	TSC_hg19_v1_chr18_+_22006671 AK312727 BC034016 AB026264 AB587563 CU689806 DQ893141 EU176771 AF208694	-451798	+	TSC_hg19_v1_chr18_+_22006608 AK292533 NM_018439 BC036074	-451856	+	TSC_hg19_v1_chr18_-_22931121 AB385259	472685	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	473574	-	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	473700	-	AF312230|HRH4|59340|histamine receptor H4##BC069136|HRH4|59340|histamine receptor H4##NM_001143828|HRH4|59340|histamine receptor H4##NM_001160166|HRH4|59340|histamine receptor H4##NM_021624|HRH4|59340|histamine receptor H4##AB045370|HRH4|59340|histamine receptor H4##BC112348|HRH4|59340|histamine receptor H4##AB044934|HRH4|59340|histamine receptor H4##AF307973|HRH4|59340|histamine receptor H4##AF325356|HRH4|59340|histamine receptor H4##AF329449|HRH4|59340|histamine receptor H4##AJ298292|HRH4|59340|histamine receptor H4##AY008280|HRH4|59340|histamine receptor H4##AY136745|HRH4|59340|histamine receptor H4##DQ835186|HRH4|59340|histamine receptor H4##DQ835187|HRH4|59340|histamine receptor H4##AK312727|IMPACT|55364|Impact homolog (mouse)##BC034016|IMPACT|55364|Impact homolog (mouse)##AB026264|IMPACT|55364|Impact homolog (mouse)##DQ893141|IMPACT|55364|Impact homolog (mouse)##EU176771|IMPACT|55364|Impact homolog (mouse)##AF208694|IMPACT|55364|Impact homolog (mouse)##AK292533|IMPACT|55364|Impact homolog (mouse)##NM_018439|IMPACT|55364|Impact homolog (mouse)##BC036074|IMPACT|55364|Impact homolog (mouse)##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521	0.955416	CTCF.p2:-11:0.955
chr3	156166210	156166341	reg1010562.p1	11.293	+	NM_172159 BC043166 AK127240	-157465	+	NM_003471 AK292999 L39833 U16953 U17968	-305413	+	NM_172160 L47665 AK292693 AK303287	-327924	+	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	106606	-	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	106668	-	NM_015508	225929	+	NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_003471|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292999|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L39833|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U16953|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U17968|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_172160|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L47665|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292693|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK303287|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	0.010059	
chr17	74381958	74382086	reg1010872.p1	11.292	+	TSC_hg19_v1_chr17_+_74381419 AF266756	-581	+	CU676993 CU688902 NM_001142602 TSC_hg19_v1_chr17_+_74381358 AK292614 AK023393	-727	+	TSC_hg19_v1_chr17_+_74380953 AK292294	-1068	+	BC007822 TSC_hg19_v1_chr17_-_74449235	67221	-	TSC_hg19_v1_chr17_-_74449273 AB051521 NM_022066	67266	-	BC092430 NM_001166579	67410	+	AF266756|SPHK1|8877|sphingosine kinase 1##NM_001142602|SPHK1|8877|sphingosine kinase 1##AK292614|SPHK1|8877|sphingosine kinase 1##AK023393|SPHK1|8877|sphingosine kinase 1##AK292294|SPHK1|8877|sphingosine kinase 1##BC007822|UBE2O|63893|ubiquitin-conjugating enzyme E2O##AB051521|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_022066|UBE2O|63893|ubiquitin-conjugating enzyme E2O##BC092430|AANAT|15|aralkylamine N-acetyltransferase##NM_001166579|AANAT|15|aralkylamine N-acetyltransferase	0.607861	CTCF.p2:-1:0.608
chr1	36010758	36010871	reg1007259.p2	11.291	+	TSC_hg19_v1_chr1_-_35920081 AK090878	-90656	-	BX648067 TSC_hg19_v1_chr1_+_35851133	-159697	+	TSC_hg19_v1_chr1_+_35734624 BC127113 BC127114 AB587559	-276186	+	TSC_hg19_v1_chr1_-_36022989 BC014530 AF275679 AK314605 AY163234	12155	-	AK316252 TSC_hg19_v1_chr1_-_36023002	12189	-	TSC_hg19_v1_chr1_-_36023005 NM_024874	12217	-	AK090878|KIAA0319L|79932|KIAA0319-like##BX648067|ZMYM4|9202|zinc finger, MYM-type 4##BC127113|ZMYM4|9202|zinc finger, MYM-type 4##BC127114|ZMYM4|9202|zinc finger, MYM-type 4##BC014530|KIAA0319L|79932|KIAA0319-like##AF275679|KIAA0319L|79932|KIAA0319-like##AK314605|KIAA0319L|79932|KIAA0319-like##AY163234|KIAA0319L|79932|KIAA0319-like##AK316252|KIAA0319L|79932|KIAA0319-like##NM_024874|KIAA0319L|79932|KIAA0319-like	0.309836	CTCF.p2:5:0.310
chr16	24264556	24264658	reg1007968.p1	11.291	+	AB587511 EU832791 GQ129253 TSC_hg19_v1_chr16_+_23847512	-417101	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	-417212	+	TSC_hg19_v1_chr16_+_23847321 BC036472	-417275	+	BC037899 NM_006539 AK095553	2267	+	AK055453 TSC_hg19_v1_chr16_+_24267474	2867	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	3091	+	EU832791|PRKCB|5579|protein kinase C, beta##GQ129253|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	0.742188	CTCF.p2:11:0.742
chr3	155869720	155869861	reg1008771.p1	11.291	+	NM_003471 AK292999 L39833 U16953 U17968	-8928	+	NM_172160 L47665 AK292693 AK303287	-31439	+	TSC_hg19_v1_chr3_+_155588481 AK315832 U10860 DQ896621 EU176462	-281221	+	NM_172159 BC043166 AK127240	139020	+	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	403091	-	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	403153	-	NM_003471|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292999|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L39833|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U16953|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U17968|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_172160|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L47665|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292693|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK303287|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK315832|GMPS|8833|guanine monphosphate synthetase##U10860|GMPS|8833|guanine monphosphate synthetase##DQ896621|GMPS|8833|guanine monphosphate synthetase##EU176462|GMPS|8833|guanine monphosphate synthetase##NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)	0.0	
chr8	121135827	121135962	reg1009386.p1	11.291	+	NM_022783 TSC_hg19_v1_chr8_+_120885965 AK315175 AK225168 AK297822 AL136678 AK225675 BC024746 AK022490 BC012040 AM392576 AM393333 AB527130 AK023916	-249890	+	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	-267780	-	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	-290817	-	TSC_hg19_v1_chr8_+_121137341 NM_021110 Y11709 AK293080 AK307716 AK311498	1461	+	CU692406 DQ893117 DQ893487 DQ896395 AK307322 TSC_hg19_v1_chr8_-_121457370 AB049640 AF112214 BC009190	321461	-	TSC_hg19_v1_chr8_-_121457391 AK311924	321499	-	NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_021110|COL14A1|7373|collagen, type XIV, alpha 1##Y11709|COL14A1|7373|collagen, type XIV, alpha 1##AK293080|COL14A1|7373|collagen, type XIV, alpha 1##AK307716|COL14A1|7373|collagen, type XIV, alpha 1##AK311498|COL14A1|7373|collagen, type XIV, alpha 1##DQ893117|MRPL13|28998|mitochondrial ribosomal protein L13##DQ893487|MRPL13|28998|mitochondrial ribosomal protein L13##DQ896395|MRPL13|28998|mitochondrial ribosomal protein L13##AK307322|MRPL13|28998|mitochondrial ribosomal protein L13##AB049640|MRPL13|28998|mitochondrial ribosomal protein L13##AF112214|MRPL13|28998|mitochondrial ribosomal protein L13##BC009190|MRPL13|28998|mitochondrial ribosomal protein L13##AK311924|MRPL13|28998|mitochondrial ribosomal protein L13	0.988012	CTCF.p2:0:0.988
chr1	58531384	58531513	reg1011078.p1	11.290	+	TSC_hg19_v1_chr1_-_57888785 AK313144	-642620	-	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	-1099732	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	-1210940	+	TSC_hg19_v1_chr1_-_58716179 CR933698 AB210012	184734	-	TSC_hg19_v1_chr1_-_58716210 AK095513 NM_021080	184761	-	TSC_hg19_v1_chr1_-_59012387 AF263547 NM_145243 AB048348 BC012915 AK308847	480975	-	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##CR933698|DAB1|1600|disabled homolog 1 (Drosophila)##AB210012|DAB1|1600|disabled homolog 1 (Drosophila)##AK095513|DAB1|1600|disabled homolog 1 (Drosophila)##NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)##NM_145243|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AB048348|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BC012915|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AK308847|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)	0.373374	CTCF.p2:-12:0.373
chr20	50002612	50002753	reg1010636.p1	11.290	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	-363025	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-427314	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-427619	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	156457	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	156593	-	EU887574 EU887577 NM_001136021	176485	-	BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.6147	CTCF.p2:-5:0.615
chr4	167942849	167942974	reg1008523.p2	11.290	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-1148457	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-1642754	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-1694056	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	212700	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	212793	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	212829	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.999285	CTCF.p2:-16:0.999
chr12	6387997	6388114	reg1008000.p2	11.289	+	TSC_hg19_v1_chr12_+_6309565 NM_001769 AK315219 AK308700 AK296332 AK309527 AY966455 X60111 AK296894 AK298431 BC011988 M38690 AY423720 DQ891314 DQ894498 AB590218 CU680148 L34068	-78485	+	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	-154296	-	AJ272204 NM_020373	-332658	-	AK001527 NM_018173 BC104751 BC105961 BC109095	31578	+	TSC_hg19_v1_chr12_+_6419886 BC040273	31830	+	AK023741 NM_001144856	32043	+	NM_001769|CD9|928|CD9 molecule##AK315219|CD9|928|CD9 molecule##AK308700|CD9|928|CD9 molecule##AK296332|CD9|928|CD9 molecule##AK309527|CD9|928|CD9 molecule##AY966455|CD9|928|CD9 molecule##X60111|CD9|928|CD9 molecule##AK296894|CD9|928|CD9 molecule##AK298431|CD9|928|CD9 molecule##BC011988|CD9|928|CD9 molecule##M38690|CD9|928|CD9 molecule##AY423720|CD9|928|CD9 molecule##DQ891314|CD9|928|CD9 molecule##DQ894498|CD9|928|CD9 molecule##L34068|CD9|928|CD9 molecule##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor##AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##AK001527|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_018173|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC104751|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC105961|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC109095|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC040273|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AK023741|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144856|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6	0.87798	CTCF.p2:-3:0.878
chr7	151047462	151047595	reg1007100.p2	11.289	+	TSC_hg19_v1_chr7_+_151038909 AF459743 AY129295 AK293159 AF155099	-8614	+	TSC_hg19_v1_chr7_+_151038874 NM_001243351 NM_016118 AF300717	-8686	+	BX648385 TSC_hg19_v1_chr7_-_150974229 NM_003078 U66619	-73299	-	AK056624 TSC_hg19_v1_chr7_-_151071775	24208	-	TSC_hg19_v1_chr7_-_151107122 NM_198285	59593	-	BC100878 BC100879 BC100880 BC100881 AF445455 NM_144727	89567	-	AF459743|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AY129295|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AK293159|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF155099|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_001243351|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_016118|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF300717|NUB1|51667|negative regulator of ubiquitin-like proteins 1##BX648385|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_003078|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##U66619|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_198285|WDR86|349136|WD repeat domain 86##BC100878|CRYGN|155051|crystallin, gamma N##BC100879|CRYGN|155051|crystallin, gamma N##BC100880|CRYGN|155051|crystallin, gamma N##BC100881|CRYGN|155051|crystallin, gamma N##AF445455|CRYGN|155051|crystallin, gamma N##NM_144727|CRYGN|155051|crystallin, gamma N	0.957152	CTCF.p2:27:0.957
chr1	180148084	180148182	reg1006683.p1	11.288	+	TSC_hg19_v1_chr1_+_180124047 AB384905	-24077	+	AF361868 TSC_hg19_v1_chr1_+_180124032 L42379	-24101	+	AB209280 BC100023 TSC_hg19_v1_chr1_+_180124023 BC017692	-24107	+	NM_033343 AF179849	51303	+	TSC_hg19_v1_chr1_-_180471976 AK314112 NM_032360	323831	-	TSC_hg19_v1_chr1_+_180601151 BC028576 NM_001135669 NM_004736	453004	+	AF361868|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##L42379|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##AB209280|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##BC100023|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##BC017692|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##NM_033343|LHX4|89884|LIM homeobox 4##AF179849|LHX4|89884|LIM homeobox 4##AK314112|ACBD6|84320|acyl-CoA binding domain containing 6##NM_032360|ACBD6|84320|acyl-CoA binding domain containing 6##BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	0.604733	CTCF.p2:20:0.605
chrX	73353375	73353505	reg1010657.p1	11.288	+	BC071776 TSC_hg19_v1_chrX_+_73164176 AK056172	-189271	+	TSC_hg19_v1_chrX_+_72783126 AB529212 AK297768 BC050300 AL832095	-570214	+	TSC_hg19_v1_chrX_+_72783043 CR936642 BC127727 BC127728 BC136691 BC136692	-570385	+	TSC_hg19_v1_chrX_-_73512419 AK057701	158965	-	TSC_hg19_v1_chrX_-_73513379 AK311345	159934	-	BC021176 NM_203303 TSC_hg19_v1_chrX_+_73524041 EU446947 EU831786 EU831864 CU676854	170622	+	BC071776|JPX|554203|JPX transcript, XIST activator (non-protein coding)##AK056172|JPX|554203|JPX transcript, XIST activator (non-protein coding)##AK297768|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC050300|CHIC1|53344|cysteine-rich hydrophobic domain 1##AL832095|CHIC1|53344|cysteine-rich hydrophobic domain 1##CR936642|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC127727|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC127728|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC136691|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC136692|CHIC1|53344|cysteine-rich hydrophobic domain 1##AK057701|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##AK311345|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##BC021176|ZCCHC13|389874|zinc finger, CCHC domain containing 13##NM_203303|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU446947|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831786|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831864|ZCCHC13|389874|zinc finger, CCHC domain containing 13	0.998977	CTCF.p2:9:0.999
chr17	63194976	63195125	reg1010493.p1	11.287	+	TSC_hg19_v1_chr17_+_63133501 AK309061 AK290535 BC022504 AK301719 AF071476 AK289876 AF493933 AY585191	-61471	+	NM_001081955 NM_001165933 NM_003835 TSC_hg19_v1_chr17_+_63133479	-61580	+	TSC_hg19_v1_chr17_-_63052903 AK301699 NM_006572	-142149	-	BC006295 TSC_hg19_v1_chr17_-_63556453	361425	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	362629	-	CR933657 TSC_hg19_v1_chr17_-_63557767	362718	-	AK309061|RGS9|8787|regulator of G-protein signaling 9##AK290535|RGS9|8787|regulator of G-protein signaling 9##BC022504|RGS9|8787|regulator of G-protein signaling 9##AK301719|RGS9|8787|regulator of G-protein signaling 9##AF071476|RGS9|8787|regulator of G-protein signaling 9##AK289876|RGS9|8787|regulator of G-protein signaling 9##AF493933|RGS9|8787|regulator of G-protein signaling 9##AY585191|RGS9|8787|regulator of G-protein signaling 9##NM_001081955|RGS9|8787|regulator of G-protein signaling 9##NM_001165933|RGS9|8787|regulator of G-protein signaling 9##NM_003835|RGS9|8787|regulator of G-protein signaling 9##AK301699|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_006572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC006295|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##CR933657|AXIN2|8313|axin 2	0.999885	CTCF.p2:14:1.000
chr3	138634342	138634480	reg1003333.p1	11.287	+	AB384841 BC114432 NM_006219 S67334	-156227	-	AK001444 NM_018147	-306493	+	NM_001033030 NM_001033031 NM_001033032 TSC_hg19_v1_chr3_+_138327638 BC012478	-306795	+	BC062549 NM_023067	31570	-	AK125319 NM_001040061	31664	+	NM_001134659	90698	-	BC114432|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##NM_006219|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##S67334|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##AK001444|FAIM|55179|Fas apoptotic inhibitory molecule##NM_018147|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033030|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033031|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033032|FAIM|55179|Fas apoptotic inhibitory molecule##BC012478|FAIM|55179|Fas apoptotic inhibitory molecule##BC062549|FOXL2|668|forkhead box L2##NM_023067|FOXL2|668|forkhead box L2##AK125319|C3orf72|401089|chromosome 3 open reading frame 72##NM_001040061|C3orf72|401089|chromosome 3 open reading frame 72##NM_001134659|PRR23A|729627|proline rich 23A	0.996117	CTCF.p2:4:0.996
chr1	27371161	27371281	reg1009492.p1	11.286	+	TSC_hg19_v1_chr1_-_27339448 AK122816	-31767	-	BC012790 BC014160 NM_052943 TSC_hg19_v1_chr1_-_27339338	-31887	-	TSC_hg19_v1_chr1_+_27320182 NM_001013642 BC069216	-51028	+	M96066 S68616 NM_003047 TSC_hg19_v1_chr1_-_27481521	110240	-	NM_015023 TSC_hg19_v1_chr1_+_27561056	189813	+	TSC_hg19_v1_chr1_+_27561124 AK315564	189906	+	AK122816|FAM46B|115572|family with sequence similarity 46, member B##BC012790|FAM46B|115572|family with sequence similarity 46, member B##BC014160|FAM46B|115572|family with sequence similarity 46, member B##NM_052943|FAM46B|115572|family with sequence similarity 46, member B##NM_001013642|TRNP1|388610|TMF1-regulated nuclear protein 1##BC069216|TRNP1|388610|TMF1-regulated nuclear protein 1##M96066|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##S68616|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_003047|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1	0.972075	CTCF.p2:-16:0.972
chr2	75426777	75426933	reg1011218.p1	11.286	+	AK289765 NM_001058 NM_015727	-227	-	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-241070	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-364604	-	BC016157 TSC_hg19_v1_chr2_-_75788066	361192	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	361235	-	AK023453 NM_032181	369992	-	AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A	0.64453	CTCF.p2:9:0.645
chr1	46912644	46912773	reg1011121.p1	11.285	+	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	-52732	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-106265	+	TSC_hg19_v1_chr1_+_46769369 D28439 BC093060 BC001934 NM_006004 BC015177 BC107703 BC001426 AK311967 Y00764 M36647 BT007070	-143321	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	59964	+	NM_001097611	104178	-	BC002755 AB000409 AK096423 TSC_hg19_v1_chr1_-_47069922	157196	-	NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##D28439|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC093060|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001934|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006004|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC015177|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC107703|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001426|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##AK311967|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##Y00764|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##M36647|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BT007070|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001097611|KNCN|148930|kinocilin##BC002755|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AB000409|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK096423|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1	0.965218	CTCF.p2:-10:0.965
chr19	47359463	47359618	reg1008861.p1	11.285	+	BC006337 TSC_hg19_v1_chr19_-_47354069 AK312003 NM_004069 NM_021575	-5409	-	AF105230 TSC_hg19_v1_chr19_-_47291850 AB209738 AF105423 NM_005628 U53347 AK292690	-67818	-	AF334818 GQ919058 AB527629 CU674018 DQ892148 DQ895345 AF102826 TSC_hg19_v1_chr19_-_47291260 BC000062 AK125222	-68267	-	AB051509 AF159851 BC131565 BC150257 NM_004491	62392	+	TSC_hg19_v1_chr19_+_47523068 BC039016	163536	+	AB054002 NM_002517 U77968	164671	+	BC006337|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##AK312003|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##NM_004069|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##NM_021575|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##AF105230|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AB209738|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF105423|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_005628|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##U53347|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK292690|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF334818|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##GQ919058|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ892148|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ895345|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF102826|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC000062|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK125222|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AB051509|ARHGAP35|2909|Rho GTPase activating protein 35##AF159851|ARHGAP35|2909|Rho GTPase activating protein 35##BC131565|ARHGAP35|2909|Rho GTPase activating protein 35##BC150257|ARHGAP35|2909|Rho GTPase activating protein 35##NM_004491|ARHGAP35|2909|Rho GTPase activating protein 35##BC039016|NPAS1|4861|neuronal PAS domain protein 1##AB054002|NPAS1|4861|neuronal PAS domain protein 1##NM_002517|NPAS1|4861|neuronal PAS domain protein 1##U77968|NPAS1|4861|neuronal PAS domain protein 1	0.0	
chr8	141678509	141678638	reg1008416.p1	11.285	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-32949	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-157010	+	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	-157181	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	332683	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	460164	+	AK128212 NM_001080431	560099	-	BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4	0.907203	CTCF.p2:-9:0.907
chr10	17649640	17649768	reg1009497.p1	11.284	+	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	-153339	-	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	-153490	-	TSC_hg19_v1_chr10_-_17271978 BC078172	-377718	-	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	9669	-	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	36526	+	NM_001098844 BC157856	144550	+	BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236	0.0	
chr6	13229452	13229592	reg1008744.p1	11.284	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-512479	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-512579	+	TSC_hg19_v1_chr6_+_12514301 D28417	-715220	+	AK091836 AX747210 NM_001242698	66295	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	99178	-	AK027010 NM_001242630	178846	-	AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.567707	CTCF.p2:-23:0.523
chr1	206837636	206837780	reg1008048.p2	11.283	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-28598	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	-28864	+	TSC_hg19_v1_chr1_-_206785905 NM_001201478 NM_006893	-51825	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	20763	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	108171	-	AY040367 NM_153758 AB463800	134518	+	BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001201478|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_006893|EIF2D|1939|eukaryotic translation initiation factor 2D##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19	0.233874	CTCF.p2:10:0.234
chr13	114048407	114048509	reg1008973.p1	11.283	+	AB449887 TSC_hg19_v1_chr13_-_114018427 AK300897 BC080640 AK309959 NM_024719	-30038	-	BC062461 TSC_hg19_v1_chr13_-_114018273	-30221	-	TSC_hg19_v1_chr13_+_113951612 BC093044 BC021288 AK301584 AB463850 DQ892614 DQ895854	-96770	+	TSC_hg19_v1_chr13_-_114103452 BC009755 NM_199162	54996	-	AJ313429 NM_138430	59380	-	TSC_hg19_v1_chr13_-_114145027 AK000099 AK001566 BC056669 NM_001014283	96562	-	AB449887|GRTP1|79774|growth hormone regulated TBC protein 1##AK300897|GRTP1|79774|growth hormone regulated TBC protein 1##BC080640|GRTP1|79774|growth hormone regulated TBC protein 1##AK309959|GRTP1|79774|growth hormone regulated TBC protein 1##NM_024719|GRTP1|79774|growth hormone regulated TBC protein 1##BC062461|GRTP1|79774|growth hormone regulated TBC protein 1##BC093044|LAMP1|3916|lysosomal-associated membrane protein 1##BC021288|LAMP1|3916|lysosomal-associated membrane protein 1##AK301584|LAMP1|3916|lysosomal-associated membrane protein 1##DQ892614|LAMP1|3916|lysosomal-associated membrane protein 1##DQ895854|LAMP1|3916|lysosomal-associated membrane protein 1##BC009755|ADPRHL1|113622|ADP-ribosylhydrolase like 1##NM_199162|ADPRHL1|113622|ADP-ribosylhydrolase like 1##AJ313429|ADPRHL1|113622|ADP-ribosylhydrolase like 1##NM_138430|ADPRHL1|113622|ADP-ribosylhydrolase like 1##AK000099|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##AK001566|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##BC056669|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##NM_001014283|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)	0.985151	CTCF.p2:6:0.985
chr4	183399689	183399833	reg1008255.p1	11.283	+	NM_001080477 HE578284 HE578285	-154607	+	TSC_hg19_v1_chr4_+_183065111 AK308489	-334636	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-5036118	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	438769	-	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	438873	-	TSC_hg19_v1_chr4_+_184020431 NM_024949	620717	+	NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##NM_024949|WWC2|80014|WW and C2 domain containing 2	0.999904	CTCF.p2:-2:1.000
chrX	45046256	45046388	reg1010405.p1	11.283	+	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-313886	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-343009	+	TSC_hg19_v1_chrX_-_44402101 BC035015 BC042813 NM_173794	-644168	-	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	13791	-	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	1260389	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	1358534	-	NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##BC035015|FUNDC1|139341|FUN14 domain containing 1##BC042813|FUNDC1|139341|FUN14 domain containing 1##NM_173794|FUNDC1|139341|FUN14 domain containing 1##BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674	1.047305	CTCF.p2:10:0.997
chr14	81462784	81462900	reg1009380.p1	11.282	+	AK303378 BC024205 NM_000369 NM_001018036 NM_001142626 M31774 BC108653 BC009237 M73747 M32215 BC063613 AB209207 BC120972 BC120973 BC127628 BC127629 BC141970 S49816 AB384880 AY429111 CU687778 S45272	-40976	+	BC045834 AK309833 TSC_hg19_v1_chr14_-_81408073	-54784	-	NM_152446	-56959	-	D14887 TSC_hg19_v1_chr14_-_81687285 NM_015859 BC050703	224438	-	D14886 NM_201595	224732	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	401984	-	BC024205|TSHR|7253|thyroid stimulating hormone receptor##NM_000369|TSHR|7253|thyroid stimulating hormone receptor##NM_001018036|TSHR|7253|thyroid stimulating hormone receptor##NM_001142626|TSHR|7253|thyroid stimulating hormone receptor##M31774|TSHR|7253|thyroid stimulating hormone receptor##BC108653|TSHR|7253|thyroid stimulating hormone receptor##BC009237|TSHR|7253|thyroid stimulating hormone receptor##M73747|TSHR|7253|thyroid stimulating hormone receptor##M32215|TSHR|7253|thyroid stimulating hormone receptor##BC063613|TSHR|7253|thyroid stimulating hormone receptor##AB209207|TSHR|7253|thyroid stimulating hormone receptor##BC120972|TSHR|7253|thyroid stimulating hormone receptor##BC120973|TSHR|7253|thyroid stimulating hormone receptor##BC127628|TSHR|7253|thyroid stimulating hormone receptor##BC127629|TSHR|7253|thyroid stimulating hormone receptor##BC141970|TSHR|7253|thyroid stimulating hormone receptor##S49816|TSHR|7253|thyroid stimulating hormone receptor##AY429111|TSHR|7253|thyroid stimulating hormone receptor##S45272|TSHR|7253|thyroid stimulating hormone receptor##BC045834|CEP128|145508|centrosomal protein 128kDa##AK309833|CEP128|145508|centrosomal protein 128kDa##NM_152446|CEP128|145508|centrosomal protein 128kDa##D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##D14886|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_201595|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2	0.946312	CTCF.p2:1:0.946
chr2	9279945	9280089	reg1009563.p1	11.281	+	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	-136196	-	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	-302298	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-457814	+	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	66875	+	TSC_hg19_v1_chr2_+_9346940 BC063308	66942	+	TSC_hg19_v1_chr2_-_9563308 AK093179	283325	-	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##BC063308|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AK093179|ITGB1BP1|9270|integrin beta 1 binding protein 1	0.989795	CTCF.p2:6:0.990
chr18	839454	839574	reg1008745.p1	11.280	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-27211	-	TSC_hg19_v1_chr18_-_712601 NM_202758 X67098 X89602 AK127818 BX648215 AK295850 AK292780 AK309035 BC001285 NM_001126123 NM_017512	-126932	-	AB464497 AK289986 BC028301 NM_001012716	-181222	-	AK313050 NM_001099733	65429	+	NM_001117 BC093837 BC101803 S83513	65827	+	AK290001 BC111020 NM_022840	1731941	-	AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_202758|ENOSF1|55556|enolase superfamily member 1##X67098|ENOSF1|55556|enolase superfamily member 1##X89602|ENOSF1|55556|enolase superfamily member 1##AK127818|ENOSF1|55556|enolase superfamily member 1##BX648215|ENOSF1|55556|enolase superfamily member 1##AK295850|ENOSF1|55556|enolase superfamily member 1##AK292780|ENOSF1|55556|enolase superfamily member 1##AK309035|ENOSF1|55556|enolase superfamily member 1##BC001285|ENOSF1|55556|enolase superfamily member 1##NM_001126123|ENOSF1|55556|enolase superfamily member 1##NM_017512|ENOSF1|55556|enolase superfamily member 1##AK289986|C18orf56|494514|chromosome 18 open reading frame 56##BC028301|C18orf56|494514|chromosome 18 open reading frame 56##NM_001012716|C18orf56|494514|chromosome 18 open reading frame 56##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4	0.999832	CTCF.p2:6:1.000
chr2	18931328	18931437	reg1008746.p1	11.280	+	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	-160572	-	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	-189466	-	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	-871428	+	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	626997	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	1137253	+	TSC_hg19_v1_chr2_-_20101456 BC050088	1170046	-	AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946	0.109034	
chr2	30249433	30249556	reg1008695.p1	11.280	+	EU788003 EU788004 EU788005 EU788006 EU788007 EU788008 EU788009 EU788010 FJ838786 FJ838787 U62540 TSC_hg19_v1_chr2_-_30144453 AK296218 NM_004304	-105040	-	TSC_hg19_v1_chr2_+_29338370 BC013862 NM_024692 AL834443	-911139	+	NM_001029883	-952368	-	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	120276	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	120339	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	120382	+	EU788003|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788004|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788005|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788006|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788007|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788008|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788009|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788010|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838786|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838787|ALK|238|anaplastic lymphoma receptor tyrosine kinase##U62540|ALK|238|anaplastic lymphoma receptor tyrosine kinase##AK296218|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_004304|ALK|238|anaplastic lymphoma receptor tyrosine kinase##BC013862|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_024692|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##AL834443|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)	0.992785	CTCF.p2:0:0.993
chr3	159750131	159750240	reg1007932.p1	11.279	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	-43453	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	-192326	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	-192492	+	TSC_hg19_v1_chr3_+_159943306 NM_001168214	193152	+	BC031660 TSC_hg19_v1_chr3_+_159943777	193518	+	AB037795 NM_001190242	351313	-	NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80##BC031660|C3orf80|401097|chromosome 3 open reading frame 80##AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	0.991581	CTCF.p2:-1:0.992
chr4	100482424	100482563	reg1009773.p1	11.279	+	NM_032149 AK093085 AX747911 AK223345 AK314711 AL136838	-50314	+	X76342 AK223472 BC131512 U07821 AK301657 AK310811 AK312854 NM_000673	-125936	-	AK301696 NM_001166504	-126203	-	BC028373 NM_152292	2331	-	AK000332 AK313548 NM_001134665 NM_001134666	2687	-	AK302602 NM_000253	2746	+	NM_032149|C4orf17|84103|chromosome 4 open reading frame 17##AK093085|C4orf17|84103|chromosome 4 open reading frame 17##AK223345|C4orf17|84103|chromosome 4 open reading frame 17##AK314711|C4orf17|84103|chromosome 4 open reading frame 17##AL136838|C4orf17|84103|chromosome 4 open reading frame 17##X76342|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK223472|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##BC131512|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##U07821|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK301657|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK310811|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK312854|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_000673|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK301696|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_001166504|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##BC028373|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##NM_152292|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##AK000332|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##AK313548|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##NM_001134665|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##NM_001134666|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##AK302602|MTTP|4547|microsomal triglyceride transfer protein##NM_000253|MTTP|4547|microsomal triglyceride transfer protein	0.248135	CTCF.p2:-18:0.248
chr20	55152691	55152785	reg1006646.p1	11.278	+	BC014951 NM_001013646	-44455	+	AK131203 NM_080615	-51758	-	NM_001012971 BC029411 BC105792 BC107704 BC070179	-52935	+	TSC_hg19_v1_chr20_+_55204361 BC051829 NM_003222 AK314272 BC035664 U85658 X95693	51692	+	EU679366 AK094784 CU678997 DQ891494 DQ894685 EU176612 AB528364 CU678634 BC008584 M60316 AK312419 AK291186 TSC_hg19_v1_chr20_-_55841286 X51801	688457	-	TSC_hg19_v1_chr20_-_55841684 BC004248 NM_001719	688950	-	BC014951|FAM209B|388799|family with sequence similarity 209, member B##NM_001013646|FAM209B|388799|family with sequence similarity 209, member B##AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##NM_001012971|FAM209A|200232|family with sequence similarity 209, member A##BC029411|FAM209A|200232|family with sequence similarity 209, member A##BC105792|FAM209B|388799|family with sequence similarity 209, member B##BC107704|FAM209A|200232|family with sequence similarity 209, member A##BC070179|FAM209A|200232|family with sequence similarity 209, member A##BC051829|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##NM_003222|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##AK314272|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##BC035664|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##U85658|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##X95693|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##EU679366|BMP7|655|bone morphogenetic protein 7##AK094784|BMP7|655|bone morphogenetic protein 7##DQ891494|BMP7|655|bone morphogenetic protein 7##DQ894685|BMP7|655|bone morphogenetic protein 7##EU176612|BMP7|655|bone morphogenetic protein 7##BC008584|BMP7|655|bone morphogenetic protein 7##M60316|BMP7|655|bone morphogenetic protein 7##AK312419|BMP7|655|bone morphogenetic protein 7##AK291186|BMP7|655|bone morphogenetic protein 7##X51801|BMP7|655|bone morphogenetic protein 7##BC004248|BMP7|655|bone morphogenetic protein 7##NM_001719|BMP7|655|bone morphogenetic protein 7	0.528043	CTCF.p2:12:0.528
chr1	223705203	223705340	reg1011108.p1	11.277	+	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	-138506	+	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	-167800	-	TSC_hg19_v1_chr1_-_223316591 NM_003268	-388665	-	TSC_hg19_v1_chr1_-_223853364 BC157893	148099	-	TSC_hg19_v1_chr1_-_223853404 NM_001143962	148146	-	AK316211 AK297800 NM_001146068	184002	+	NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4##NM_003268|TLR5|7100|toll-like receptor 5##BC157893|CAPN8|388743|calpain 8##NM_001143962|CAPN8|388743|calpain 8##AK316211|CAPN2|824|calpain 2, (m/II) large subunit##AK297800|CAPN2|824|calpain 2, (m/II) large subunit##NM_001146068|CAPN2|824|calpain 2, (m/II) large subunit	0.997117	CTCF.p2:-3:0.997
chr15	55460677	55460811	reg1010140.p1	11.277	+	NM_001080534	-1155644	+	AK096055 BX537884 NM_182758	-1408897	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-2378550	-	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	28348	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	28435	-	AF125393 NM_183234 U57094 U38654 NM_004580	101793	-	NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family	0.645771	CTCF.p2:10:0.646
chr2	143792010	143792164	reg1006867.p1	11.277	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-156847	+	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	-156881	+	AF176832 NM_018557	-902818	-	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	94843	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	94904	+	NM_024659	1202818	-	BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1	1.851872	CTCF.p2:52:0.858	CTCF.p2:-58:0.994
chr2	175206331	175206446	reg1008465.p1	11.277	+	TSC_hg19_v1_chr2_+_175199681 NM_001145250	-6644	+	TSC_hg19_v1_chr2_-_175113328 AF078859 AL833441 AK225138 AK074710 AK027523 BC012842 NM_001011708 NM_013341	-93054	-	TSC_hg19_v1_chr2_-_175113261 AK225112 AF078868	-93118	-	AB528012 AF098297 CU677191 TSC_hg19_v1_chr2_-_175260427 BC031018 U03644 BC046098 BC015040 BC021175 BC038987 AK292389 NM_004882	54014	-	TSC_hg19_v1_chr2_+_175260466 NM_001193528 NM_024583 AK296558 AK295357 AK295357 AK057912 AK057912 BC007344	54089	+	BC119684 BC119685 BC119685 TSC_hg19_v1_chr2_+_175260519	54170	+	NM_001145250|SP9|100131390|Sp9 transcription factor homolog (mouse)##AF078859|OLA1|29789|Obg-like ATPase 1##AL833441|OLA1|29789|Obg-like ATPase 1##AK225138|OLA1|29789|Obg-like ATPase 1##AK074710|OLA1|29789|Obg-like ATPase 1##AK027523|OLA1|29789|Obg-like ATPase 1##BC012842|OLA1|29789|Obg-like ATPase 1##NM_001011708|OLA1|29789|Obg-like ATPase 1##NM_013341|OLA1|29789|Obg-like ATPase 1##AK225112|OLA1|29789|Obg-like ATPase 1##AF078868|OLA1|29789|Obg-like ATPase 1##AF098297|CIR1|9541|corepressor interacting with RBPJ, 1##BC031018|CIR1|9541|corepressor interacting with RBPJ, 1##U03644|CIR1|9541|corepressor interacting with RBPJ, 1##BC046098|CIR1|9541|corepressor interacting with RBPJ, 1##BC015040|CIR1|9541|corepressor interacting with RBPJ, 1##BC021175|CIR1|9541|corepressor interacting with RBPJ, 1##BC038987|CIR1|9541|corepressor interacting with RBPJ, 1##AK292389|CIR1|9541|corepressor interacting with RBPJ, 1##NM_004882|CIR1|9541|corepressor interacting with RBPJ, 1##NM_001193528|SCRN3|79634|secernin 3##NM_024583|SCRN3|79634|secernin 3##AK296558|SCRN3|79634|secernin 3##AK295357|SCRN3|79634|secernin 3##AK295357|SCRN3|79634|secernin 3##AK057912|SCRN3|79634|secernin 3##AK057912|SCRN3|79634|secernin 3##BC119684|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3	0.24032	CTCF.p2:12:0.240
chr10	129514197	129514291	reg1007199.p1	11.276	+	NM_001030013	-166632	+	AK127465 NM_001039762	-519823	-	TSC_hg19_v1_chr10_+_128594020 NM_001380 BC144632 BC146857 D50857	-920213	+	NM_207426	21293	+	CU688662 TSC_hg19_v1_chr10_-_129691142	176850	-	TSC_hg19_v1_chr10_-_129691206 BC029478 NM_152311	176963	-	NM_001030013|NPS|594857|neuropeptide S##AK127465|FAM196A|642938|family with sequence similarity 196, member A##NM_001039762|FAM196A|642938|family with sequence similarity 196, member A##NM_001380|DOCK1|1793|dedicator of cytokinesis 1##BC144632|DOCK1|1793|dedicator of cytokinesis 1##BC146857|DOCK1|1793|dedicator of cytokinesis 1##D50857|DOCK1|1793|dedicator of cytokinesis 1##NM_207426|FOXI2|399823|forkhead box I2##BC029478|CLRN3|119467|clarin 3##NM_152311|CLRN3|119467|clarin 3	0.981701	CTCF.p2:4:0.982
chr1	35318350	35318531	reg1008562.p1	11.276	+	NM_002060 AK291563 AK313477 BC072389 BC027889 M96789	-59831	+	TSC_hg19_v1_chr1_+_35247838 NM_001005752 BC012918	-70561	+	AK026139 NM_024009 TSC_hg19_v1_chr1_+_35246807	-71634	+	NM_001164824 BC034598	6217	-	BX648912 BC107421 NM_001164825 TSC_hg19_v1_chr1_-_35325339 BC011880 BC073851 AK074853 BC064320 NM_138428	6935	-	BC141907 TSC_hg19_v1_chr1_+_35331580	13117	+	NM_002060|GJA4|2701|gap junction protein, alpha 4, 37kDa##AK291563|GJA4|2701|gap junction protein, alpha 4, 37kDa##BC072389|GJA4|2701|gap junction protein, alpha 4, 37kDa##BC027889|GJA4|2701|gap junction protein, alpha 4, 37kDa##M96789|GJA4|2701|gap junction protein, alpha 4, 37kDa##NM_001005752|GJB3|2707|gap junction protein, beta 3, 31kDa##BC012918|GJB3|2707|gap junction protein, beta 3, 31kDa##AK026139|GJB3|2707|gap junction protein, beta 3, 31kDa##NM_024009|GJB3|2707|gap junction protein, beta 3, 31kDa##NM_001164824|C1orf212|113444|chromosome 1 open reading frame 212##BC034598|C1orf212|113444|chromosome 1 open reading frame 212##BX648912|C1orf212|113444|chromosome 1 open reading frame 212##BC107421|C1orf212|113444|chromosome 1 open reading frame 212##NM_001164825|C1orf212|113444|chromosome 1 open reading frame 212##BC011880|C1orf212|113444|chromosome 1 open reading frame 212##BC073851|C1orf212|113444|chromosome 1 open reading frame 212##AK074853|C1orf212|113444|chromosome 1 open reading frame 212##BC064320|C1orf212|113444|chromosome 1 open reading frame 212##NM_138428|C1orf212|113444|chromosome 1 open reading frame 212	0.652698	CTCF.p2:-60:0.507
chr13	53824511	53824678	reg1007946.p1	11.276	+	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	-221682	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	-401819	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-510632	-	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3890522	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3897092	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3903665	+	AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	1.453234	CTCF.p2:-11:0.999	CTCF.p2:82:0.454
chr20	16456707	16456851	reg1008988.p1	11.276	+	BC018687 NM_001033087	-1279276	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-2138523	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-2480443	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	97234	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	253884	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	272242	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	0.630696	CTCF.p2:24:0.631
chr6	47381850	47381982	reg1010078.p1	11.276	+	TSC_hg19_v1_chr6_-_47277647 NM_014452	-104221	-	AK315560 TSC_hg19_v1_chr6_-_47277645	-104271	-	AK001504 TSC_hg19_v1_chr6_-_47277640	-104276	-	TSC_hg19_v1_chr6_+_47445524 NM_012120	63599	+	TSC_hg19_v1_chr6_+_47445937 AF146277 BC069444	64000	+	AY140953 DQ315369 NM_153839	242357	+	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AK315560|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AK001504|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##NM_012120|CD2AP|23607|CD2-associated protein##AF146277|CD2AP|23607|CD2-associated protein##BC069444|CD2AP|23607|CD2-associated protein##AY140953|GPR111|222611|G protein-coupled receptor 111##DQ315369|GPR111|222611|G protein-coupled receptor 111##NM_153839|GPR111|222611|G protein-coupled receptor 111	0.999491	CTCF.p2:-12:0.999
chr7	39504670	39504803	reg1007827.p1	11.276	+	NM_001166018 NM_007252	-487128	+	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	-555943	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	-833659	-	TSC_hg19_v1_chr7_+_39606002 AK314937 NM_020192 AK293511 AF226046 BC022043 CR457198 DQ892829 DQ896074 DQ896075	101233	+	TSC_hg19_v1_chr7_+_39663159 NM_005402	158430	+	TSC_hg19_v1_chr7_+_39663204 BC039858	158475	+	NM_001166018|POU6F2|11281|POU class 6 homeobox 2##NM_007252|POU6F2|11281|POU class 6 homeobox 2##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##AK314937|YAE1D1|57002|Yae1 domain containing 1##NM_020192|YAE1D1|57002|Yae1 domain containing 1##AF226046|YAE1D1|57002|Yae1 domain containing 1##BC022043|YAE1D1|57002|Yae1 domain containing 1##CR457198|YAE1D1|57002|Yae1 domain containing 1##DQ892829|YAE1D1|57002|Yae1 domain containing 1##DQ896074|YAE1D1|57002|Yae1 domain containing 1##DQ896075|YAE1D1|57002|Yae1 domain containing 1##NM_005402|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)	0.933833	CTCF.p2:14:0.934
chr3	182906824	182906942	reg1009530.p1	11.275	+	TSC_hg19_v1_chr3_-_182880523 AB013924 AK313172 BC032940 NM_014398	-26319	-	TSC_hg19_v1_chr3_-_182880435 DQ892118	-26444	-	BC036395 TSC_hg19_v1_chr3_-_182833987	-72960	-	TSC_hg19_v1_chr3_+_182970969 NM_032047 AK074424	64065	+	AB209517 TSC_hg19_v1_chr3_+_182971343	64395	+	TSC_hg19_v1_chr3_+_182971608 AK091474 AX747008	64723	+	AB013924|LAMP3|27074|lysosomal-associated membrane protein 3##AK313172|LAMP3|27074|lysosomal-associated membrane protein 3##BC032940|LAMP3|27074|lysosomal-associated membrane protein 3##NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3##DQ892118|LAMP3|27074|lysosomal-associated membrane protein 3##BC036395|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	0.945131	CTCF.p2:-4:0.945
chr6	7723367	7723482	reg1007695.p1	11.275	+	TSC_hg19_v1_chr6_+_7590453 AL832462 NM_152551 AK292409 AK056796 BC054008 BC114631 BC114630 BC062458	-132965	+	TSC_hg19_v1_chr6_+_7579692 J05211	-143687	+	TSC_hg19_v1_chr6_+_7541904 AB621818 AK304182	-181494	+	TSC_hg19_v1_chr6_+_7726328 AK300628	2968	+	NM_001718 M60315 BC096084 BC096085 BC099624 BC099625 BC111763 BC112352 BC113018 BC113019 BC128031	3626	+	TSC_hg19_v1_chr6_-_7910300 AK315598 NM_001145549	186905	-	AL832462|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##NM_152551|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##AK292409|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##AK056796|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC054008|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC114631|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC114630|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC062458|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##J05211|DSP|1832|desmoplakin##AK304182|DSP|1832|desmoplakin##AK300628|BMP6|654|bone morphogenetic protein 6##NM_001718|BMP6|654|bone morphogenetic protein 6##M60315|BMP6|654|bone morphogenetic protein 6##BC096084|BMP6|654|bone morphogenetic protein 6##BC096085|BMP6|654|bone morphogenetic protein 6##BC099624|BMP6|654|bone morphogenetic protein 6##BC099625|BMP6|654|bone morphogenetic protein 6##BC111763|BMP6|654|bone morphogenetic protein 6##BC112352|BMP6|654|bone morphogenetic protein 6##BC113018|BMP6|654|bone morphogenetic protein 6##BC113019|BMP6|654|bone morphogenetic protein 6##BC128031|BMP6|654|bone morphogenetic protein 6##AK315598|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##NM_001145549|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)	0.913272	CTCF.p2:3:0.913
chr18	32811071	32811198	reg1006687.p1	11.274	+	TSC_hg19_v1_chr18_+_32621374 NM_014268 AK090945 AX746696 AK315766 BC007318 AB016823 AB528177 AM393705 BT020086 CR536545 CU675609 DQ892923 DQ896172 AK296251	-189678	+	NM_001143827 AK294833 TSC_hg19_v1_chr18_+_32558384	-252834	+	NM_001143826 TSC_hg19_v1_chr18_+_32557008	-254175	+	TSC_hg19_v1_chr18_+_32821018 NM_001135178 NM_032347 AF533250 AY157641 AK311533 AK027384 BC006172	9912	+	TSC_hg19_v1_chr18_-_32870201 AX721137 AK131291 AK128697 AY234408 AK303447 NM_001112734 NM_001166012	59038	-	TSC_hg19_v1_chr18_+_32870279 AK023456 AF159567 AK094216	59170	+	NM_014268|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK090945|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK315766|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##BC007318|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AB016823|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AM393705|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##BT020086|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##CR536545|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##DQ892923|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##DQ896172|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK296251|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001143827|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK294833|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001135178|ZNF397|84307|zinc finger protein 397##NM_032347|ZNF397|84307|zinc finger protein 397##AF533250|ZNF397|84307|zinc finger protein 397##AY157641|ZNF397|84307|zinc finger protein 397##AK311533|ZNF397|84307|zinc finger protein 397##AK027384|ZNF397|84307|zinc finger protein 397##BC006172|ZNF397|84307|zinc finger protein 397##AK131291|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK128697|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AY234408|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK303447|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##NM_001112734|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##NM_001166012|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK023456|ZNF271|10778|zinc finger protein 271##AF159567|ZNF271|10778|zinc finger protein 271##AK094216|ZNF271|10778|zinc finger protein 271	0.997859	CTCF.p2:-15:0.998
chr20	32241144	32241261	reg1007432.p3	11.274	+	BC015066 NM_001039709 NM_005093 AF069747 AF052212	-91025	+	TSC_hg19_v1_chr20_+_32077922 NM_001032999 AF052211	-163231	+	TSC_hg19_v1_chr20_+_32077885 AK294168 AK307887	-163366	+	DQ080434 NM_080825 BC032818	8913	+	NM_001024675 BC137111 BC137114	13111	+	TSC_hg19_v1_chr20_-_32262195 AF193759 AK291895 BC023270 AF409141 BC047673 AK023706 AK309285	20994	-	BC015066|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##NM_001039709|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##NM_005093|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AF069747|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AF052212|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AK294168|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AK307887|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##DQ080434|C20orf144|128864|chromosome 20 open reading frame 144##NM_080825|C20orf144|128864|chromosome 20 open reading frame 144##BC032818|C20orf144|128864|chromosome 20 open reading frame 144##NM_001024675|ACTL10|170487|actin-like 10##BC137111|ACTL10|170487|actin-like 10##BC137114|ACTL10|170487|actin-like 10##AF193759|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##AK291895|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##BC023270|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##AF409141|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##BC047673|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##AK023706|NECAB3|63941|N-terminal EF-hand calcium binding protein 3##AK309285|NECAB3|63941|N-terminal EF-hand calcium binding protein 3	0.539006	CTCF.p2:19:0.539
chr4	170534398	170534534	reg1011053.p1	11.274	+	TSC_hg19_v1_chr4_-_170533762 NM_001199397 NM_001199398 NM_001199399 NM_001199400 NM_012224	-697	-	BC015147 BC114491 AB067488 CR933642 AL050385 TSC_hg19_v1_chr4_-_170533735 BC068201 CR936672	-830	-	TSC_hg19_v1_chr4_-_170192202 NM_020870	-342246	-	TSC_hg19_v1_chr4_+_170541683 NM_001243372 NM_001829 NM_173872	7205	+	TSC_hg19_v1_chr4_+_170541724 BX647119	7242	+	TSC_hg19_v1_chr4_+_170541735 BC070318 AK304362 BC054877 BC026256 BC136510	7391	+	NM_001199397|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199398|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199399|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199400|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_012224|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC015147|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC114491|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AB067488|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR933642|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AL050385|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC068201|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR936672|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1##NM_001243372|CLCN3|1182|chloride channel 3##NM_001829|CLCN3|1182|chloride channel 3##NM_173872|CLCN3|1182|chloride channel 3##BX647119|CLCN3|1182|chloride channel 3##AK304362|CLCN3|1182|chloride channel 3##BC054877|CLCN3|1182|chloride channel 3##BC026256|CLCN3|1182|chloride channel 3##BC136510|CLCN3|1182|chloride channel 3	0.509868	CTCF.p2:3:0.510
chr11	72542626	72542759	reg1010522.p1	11.273	+	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-17210	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-17287	+	AB209473 AK095668 BC035482 BC007919 BC014033 AK310301 AK315255 NM_006645	-37996	-	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	310357	-	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	386652	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	386754	+	BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK095668|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC035482|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC007919|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC014033|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AK315255|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##NM_006645|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.993789	CTCF.p2:-9:0.994
chr17	7997295	7997403	reg1007399.p1	11.273	+	AF038461 NM_001139	-6329	-	TSC_hg19_v1_chr17_+_7982776 AK096086 BC046191	-14574	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	-37147	+	AJ269499 AK313677 NM_021628	24483	-	AK296416 AK299742 NM_001165960	24834	-	BC039887 AB049064 AB463716 NM_001165967 NM_032580	30053	-	AF038461|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##NM_001139|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##AJ269499|ALOXE3|59344|arachidonate lipoxygenase 3##AK313677|ALOXE3|59344|arachidonate lipoxygenase 3##NM_021628|ALOXE3|59344|arachidonate lipoxygenase 3##AK296416|ALOXE3|59344|arachidonate lipoxygenase 3##AK299742|ALOXE3|59344|arachidonate lipoxygenase 3##NM_001165960|ALOXE3|59344|arachidonate lipoxygenase 3##BC039887|HES7|84667|hairy and enhancer of split 7 (Drosophila)##AB049064|HES7|84667|hairy and enhancer of split 7 (Drosophila)##NM_001165967|HES7|84667|hairy and enhancer of split 7 (Drosophila)##NM_032580|HES7|84667|hairy and enhancer of split 7 (Drosophila)	0.999496	CTCF.p2:-3:0.999
chr19	36001398	36001528	reg1007924.p2	11.272	+	AY789698 AY789699 AY789700 AY789701 AY789702 AY789703 AY789704 AY789705 AY789706 BC011886 TSC_hg19_v1_chr19_-_36001373 AK096215 AK304668 AK316475 EF158323 NM_001126059 EF158324 EF158325 EF158326	-90	-	AY622964 AY789707 AF086315 AL832080 NM_001035516	-8658	-	AM392574 AM392667 AM392672 AM392738 AM392847 AM392851 AM393397 AM393477 AY359007 HQ258707 BC130501 NM_001244847 NM_207392	-20075	-	BC035311 AY358412 NM_001126056 NM_001126057 NM_001126058 NM_001190347 NM_001190348 NM_001190349 NM_033317	3093	-	BC063640 BX648076 AK291305 AY358701 NM_001166034 NM_001166035 NM_198538	17760	-	NM_014364 AK314980 BC036373 AK225727 AY306129 AJ005371 DQ890856 DQ894010	22907	+	AY789698|DMKN|93099|dermokine##AY789699|DMKN|93099|dermokine##AY789700|DMKN|93099|dermokine##AY789701|DMKN|93099|dermokine##AY789702|DMKN|93099|dermokine##AY789703|DMKN|93099|dermokine##AY789704|DMKN|93099|dermokine##AY789705|DMKN|93099|dermokine##AY789706|DMKN|93099|dermokine##BC011886|DMKN|93099|dermokine##AK096215|DMKN|93099|dermokine##AK304668|DMKN|93099|dermokine##AK316475|DMKN|93099|dermokine##EF158323|DMKN|93099|dermokine##NM_001126059|DMKN|93099|dermokine##EF158324|DMKN|93099|dermokine##EF158325|DMKN|93099|dermokine##EF158326|DMKN|93099|dermokine##AY622964|DMKN|93099|dermokine##AY789707|DMKN|93099|dermokine##AF086315|DMKN|93099|dermokine##AL832080|DMKN|93099|dermokine##NM_001035516|DMKN|93099|dermokine##AM392574|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392667|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392672|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392738|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392847|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392851|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393397|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393477|KRTDAP|388533|keratinocyte differentiation-associated protein##AY359007|KRTDAP|388533|keratinocyte differentiation-associated protein##HQ258707|KRTDAP|388533|keratinocyte differentiation-associated protein##BC130501|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_001244847|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_207392|KRTDAP|388533|keratinocyte differentiation-associated protein##BC035311|DMKN|93099|dermokine##AY358412|DMKN|93099|dermokine##NM_001126056|DMKN|93099|dermokine##NM_001126057|DMKN|93099|dermokine##NM_001126058|DMKN|93099|dermokine##NM_001190347|DMKN|93099|dermokine##NM_001190348|DMKN|93099|dermokine##NM_001190349|DMKN|93099|dermokine##NM_033317|DMKN|93099|dermokine##BC063640|SBSN|374897|suprabasin##BX648076|SBSN|374897|suprabasin##AK291305|SBSN|374897|suprabasin##AY358701|SBSN|374897|suprabasin##NM_001166034|SBSN|374897|suprabasin##NM_001166035|SBSN|374897|suprabasin##NM_198538|SBSN|374897|suprabasin##NM_014364|GAPDHS|26330|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic##AK314980|GAPDHS|26330|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic##BC036373|GAPDHS|26330|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic##AK225727|GAPDHS|26330|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic##AY306129|GAPDHS|26330|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic##AJ005371|GAPDHS|26330|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic##DQ890856|GAPDHS|26330|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic##DQ894010|GAPDHS|26330|glyceraldehyde-3-phosphate dehydrogenase, spermatogenic	1.045727	CTCF.p2:0:1.000
chr2	39286638	39286781	reg1008683.p1	11.272	+	TSC_hg19_v1_chr2_-_39187477 BC030087	-99229	-	NM_001145451	-140206	+	AY367766 NM_001145450 TSC_hg19_v1_chr2_+_39103127 BC102032 BC102034 BC102035	-183556	+	L13857 AB463274 NM_005633	60873	-	TSC_hg19_v1_chr2_-_39348166 AK290228	61450	-	AY845084 AY847283 NM_001009565 BC144460	169995	-	BC030087|LOC375196|375196|uncharacterized LOC375196##NM_001145451|ARHGEF33|100271715|Rho guanine nucleotide exchange factor (GEF) 33##AY367766|MORN2|729967|MORN repeat containing 2##NM_001145450|MORN2|729967|MORN repeat containing 2##BC102032|MORN2|729967|MORN repeat containing 2##BC102034|MORN2|729967|MORN repeat containing 2##BC102035|MORN2|729967|MORN repeat containing 2##L13857|SOS1|6654|son of sevenless homolog 1 (Drosophila)##NM_005633|SOS1|6654|son of sevenless homolog 1 (Drosophila)##AK290228|SOS1|6654|son of sevenless homolog 1 (Drosophila)##AY845084|CDKL4|344387|cyclin-dependent kinase-like 4##AY847283|CDKL4|344387|cyclin-dependent kinase-like 4##NM_001009565|CDKL4|344387|cyclin-dependent kinase-like 4##BC144460|CDKL4|344387|cyclin-dependent kinase-like 4	0.847632	CTCF.p2:-17:0.848
chr1	27932972	27933090	reg1007178.p1	11.271	+	BC064935 TSC_hg19_v1_chr1_-_27930394	-2654	-	BC042058 NM_001029882	-2910	-	TSC_hg19_v1_chr1_-_27816676 NM_001201404 NM_006990	-116355	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	19639	-	M27454 AK301078 BC002836 AK304846 NM_001042729	20044	-	TSC_hg19_v1_chr1_-_27961656 BC064382 AK130188 NM_005248	28655	-	BC064935|AHDC1|27245|AT hook, DNA binding motif, containing 1##NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1##NM_001201404|WASF2|10163|WAS protein family, member 2##NM_006990|WASF2|10163|WAS protein family, member 2##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##M27454|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK301078|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042729|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##BC064382|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK130188|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_005248|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	0.996147	CTCF.p2:22:0.996
chr6	119121795	119121914	reg1008412.p1	11.271	+	BC110835 BC064835 NM_001178035	-90621	-	BC048977 BC052778 NM_001042475 NM_206921 BC036553	-148818	-	NM_002667 M63603 AK311799 BC005269	-252389	+	NM_014034 AK025738 AL050261 BC010878 AB028628 AF279306 CU679835 CR457347	93554	+	DQ892465 DQ895678 NM_017696	131040	-	TSC_hg19_v1_chr6_-_119256163 AK122665	134319	-	BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##DQ892465|MCM9|254394|minichromosome maintenance complex component 9##DQ895678|MCM9|254394|minichromosome maintenance complex component 9##NM_017696|MCM9|254394|minichromosome maintenance complex component 9##AK122665|MCM9|254394|minichromosome maintenance complex component 9	0.996181	CTCF.p2:3:0.996
chr2	64750028	64750139	reg1007846.p1	11.270	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	-68435	+	TSC_hg19_v1_chr2_+_64681295 NM_014181	-68783	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-378559	-	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	1401	+	TSC_hg19_v1_chr2_+_64751580 AL833962	1519	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	130766	-	BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##AL833962|AFTPH|54812|aftiphilin##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2	0.963108	CTCF.p2:0:0.963
chr3	138136490	138136612	reg1009132.p1	11.270	+	NM_001252090	-68582	+	TSC_hg19_v1_chr3_+_138067711 AK295640 NM_001252092	-68833	+	TSC_hg19_v1_chr3_+_138067476 NM_001085049 NM_001252093 BC047690 AF043938	-69040	+	NM_031913 TSC_hg19_v1_chr3_+_138153418	16865	+	TSC_hg19_v1_chr3_+_138153427 BC037292 AK125080 AK289530	16888	+	TSC_hg19_v1_chr3_-_138313097 AF202146 AF289495 AK225440 AK299003 AK295866 AK294587 AK301913 BC030598 NM_024491 AK314314	176559	-	NM_001252090|MRAS|22808|muscle RAS oncogene homolog##AK295640|MRAS|22808|muscle RAS oncogene homolog##NM_001252092|MRAS|22808|muscle RAS oncogene homolog##NM_001085049|MRAS|22808|muscle RAS oncogene homolog##NM_001252093|MRAS|22808|muscle RAS oncogene homolog##BC047690|MRAS|22808|muscle RAS oncogene homolog##AF043938|MRAS|22808|muscle RAS oncogene homolog##NM_031913|ESYT3|83850|extended synaptotagmin-like protein 3##BC037292|ESYT3|83850|extended synaptotagmin-like protein 3##AK125080|ESYT3|83850|extended synaptotagmin-like protein 3##AK289530|ESYT3|83850|extended synaptotagmin-like protein 3##AF202146|CEP70|80321|centrosomal protein 70kDa##AF289495|CEP70|80321|centrosomal protein 70kDa##AK225440|CEP70|80321|centrosomal protein 70kDa##AK299003|CEP70|80321|centrosomal protein 70kDa##AK295866|CEP70|80321|centrosomal protein 70kDa##AK294587|CEP70|80321|centrosomal protein 70kDa##AK301913|CEP70|80321|centrosomal protein 70kDa##BC030598|CEP70|80321|centrosomal protein 70kDa##NM_024491|CEP70|80321|centrosomal protein 70kDa##AK314314|CEP70|80321|centrosomal protein 70kDa	0.999792	CTCF.p2:-1:1.000
chr6	132601035	132601151	reg1003689.p2	11.270	+	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	-328679	-	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-471832	+	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	-471932	+	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	121523	-	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	233157	-	BC069083 NM_175057 AY183469	258334	+	BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7##BC069083|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##NM_175057|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183469|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)	0.016977	
chr9	38160738	38160873	reg1010924.p1	11.270	+	X75342 NM_003028 TSC_hg19_v1_chr9_-_38069225 BC094765	-91564	-	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	-91664	-	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	-256439	-	TSC_hg19_v1_chr9_+_38392669 NM_000692	231868	+	TSC_hg19_v1_chr9_+_38392698 AK313344	231892	+	TSC_hg19_v1_chr9_+_38392760 AK297020 BC001619 AK225950	231937	+	X75342|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_003028|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B##AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK313344|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK297020|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##BC001619|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK225950|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1	1.133377	CTCF.p2:6:0.993
chr4	3039176	3039282	reg1008039.p1	11.269	+	TSC_hg19_v1_chr4_+_2965297 AK292390 AK223581 NM_001004056 NM_001004057 NM_182982 BC110825 BC027597 BC039732 BC117320 U33054 U33055 U33056 AK293569 X97879 X97880 X97881 X98118 HQ258463 X75897	-73694	+	TSC_hg19_v1_chr4_-_2965155 AK292939	-74035	-	BC053635 TSC_hg19_v1_chr4_-_2965134 BC017358 NM_003703	-74106	-	L12392 TSC_hg19_v1_chr4_+_3076416 AB016794 NM_002111	37098	+	AK126094 NM_001042690	211537	+	TSC_hg19_v1_chr4_+_3294763 AK310999 BC028154	255531	+	AK292390|GRK4|2868|G protein-coupled receptor kinase 4##AK223581|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004056|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004057|GRK4|2868|G protein-coupled receptor kinase 4##NM_182982|GRK4|2868|G protein-coupled receptor kinase 4##BC027597|GRK4|2868|G protein-coupled receptor kinase 4##BC117320|GRK4|2868|G protein-coupled receptor kinase 4##U33054|GRK4|2868|G protein-coupled receptor kinase 4##U33055|GRK4|2868|G protein-coupled receptor kinase 4##U33056|GRK4|2868|G protein-coupled receptor kinase 4##X97879|GRK4|2868|G protein-coupled receptor kinase 4##X97880|GRK4|2868|G protein-coupled receptor kinase 4##X97881|GRK4|2868|G protein-coupled receptor kinase 4##X98118|GRK4|2868|G protein-coupled receptor kinase 4##HQ258463|GRK4|2868|G protein-coupled receptor kinase 4##X75897|GRK4|2868|G protein-coupled receptor kinase 4##AK292939|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC053635|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC017358|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##NM_003703|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##L12392|HTT|3064|huntingtin##AB016794|HTT|3064|huntingtin##NM_002111|HTT|3064|huntingtin##AK126094|C4orf44|345222|chromosome 4 open reading frame 44##NM_001042690|C4orf44|345222|chromosome 4 open reading frame 44##AK310999|RGS12|6002|regulator of G-protein signaling 12##BC028154|RGS12|6002|regulator of G-protein signaling 12	0.028621	
chr6	107057701	107057837	reg1011291.p1	11.269	+	TSC_hg19_v1_chr6_+_106960443 U83115	-97358	+	AK056705 NM_001624	-98040	+	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	-284106	-	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	19511	-	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	19728	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	291703	+	U83115|AIM1|202|absent in melanoma 1##AK056705|AIM1|202|absent in melanoma 1##NM_001624|AIM1|202|absent in melanoma 1##CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203	0.95348	CTCF.p2:-1:0.587	CTCF.p2:-2:0.366
chr7	37873290	37873388	reg1007256.p2	11.269	+	AB529245 AY288420 BC120951 BC120952 NM_181791	-93344	+	BC043356 TSC_hg19_v1_chr7_+_37723380	-149957	+	NM_001206480	-384445	-	BC036816 NM_016616	14859	+	AF026692 BC047684 BC058911 AK313029 TSC_hg19_v1_chr7_-_37956420 AK303977 AK302357	83072	-	TSC_hg19_v1_chr7_-_37956526 BC032828 NM_003014	83181	-	AY288420|GPR141|353345|G protein-coupled receptor 141##BC120951|GPR141|353345|G protein-coupled receptor 141##BC120952|GPR141|353345|G protein-coupled receptor 141##NM_181791|GPR141|353345|G protein-coupled receptor 141##NM_001206480|ELMO1|9844|engulfment and cell motility 1##BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##AF026692|SFRP4|6424|secreted frizzled-related protein 4##BC047684|SFRP4|6424|secreted frizzled-related protein 4##BC058911|SFRP4|6424|secreted frizzled-related protein 4##AK313029|SFRP4|6424|secreted frizzled-related protein 4##AK303977|SFRP4|6424|secreted frizzled-related protein 4##AK302357|SFRP4|6424|secreted frizzled-related protein 4##BC032828|SFRP4|6424|secreted frizzled-related protein 4##NM_003014|SFRP4|6424|secreted frizzled-related protein 4	0.730218	CTCF.p2:8:0.730
chr1	111942558	111942668	reg1007867.p1	11.268	+	BC093891 BC101501 HM237139 NM_181643 AK303897 BC050319 AK310801 AK074433 BC068603 HM237140	-53379	+	AK290702 AB025008 AB025009 AY825504 NM_021797 AF290004 AY789444 NM_201653	-109108	+	NM_001025199 U58515 AK298466 AK223316	-170221	+	U09550 AK298757 AK314074 BC126177 BC136406 AY189737 NM_002557	27763	-	NM_001688	49129	+	AB529135 AF478464 CU679349 AF052183 AY225316 TSC_hg19_v1_chr1_-_111991843 BC016946 NM_024102 BC001679 BC006477	49207	-	BC093891|C1orf88|128344|chromosome 1 open reading frame 88##BC101501|C1orf88|128344|chromosome 1 open reading frame 88##HM237139|C1orf88|128344|chromosome 1 open reading frame 88##NM_181643|C1orf88|128344|chromosome 1 open reading frame 88##AK303897|C1orf88|128344|chromosome 1 open reading frame 88##BC050319|C1orf88|128344|chromosome 1 open reading frame 88##AK310801|C1orf88|128344|chromosome 1 open reading frame 88##AK074433|C1orf88|128344|chromosome 1 open reading frame 88##BC068603|C1orf88|128344|chromosome 1 open reading frame 88##HM237140|C1orf88|128344|chromosome 1 open reading frame 88##AK290702|CHIA|27159|chitinase, acidic##AB025008|CHIA|27159|chitinase, acidic##AB025009|CHIA|27159|chitinase, acidic##AY825504|CHIA|27159|chitinase, acidic##NM_021797|CHIA|27159|chitinase, acidic##AF290004|CHIA|27159|chitinase, acidic##AY789444|CHIA|27159|chitinase, acidic##NM_201653|CHIA|27159|chitinase, acidic##NM_001025199|CHI3L2|1117|chitinase 3-like 2##U58515|CHI3L2|1117|chitinase 3-like 2##AK298466|CHI3L2|1117|chitinase 3-like 2##AK223316|CHI3L2|1117|chitinase 3-like 2##U09550|OVGP1|5016|oviductal glycoprotein 1, 120kDa##AK298757|OVGP1|5016|oviductal glycoprotein 1, 120kDa##AK314074|OVGP1|5016|oviductal glycoprotein 1, 120kDa##BC126177|OVGP1|5016|oviductal glycoprotein 1, 120kDa##BC136406|OVGP1|5016|oviductal glycoprotein 1, 120kDa##AY189737|OVGP1|5016|oviductal glycoprotein 1, 120kDa##NM_002557|OVGP1|5016|oviductal glycoprotein 1, 120kDa##NM_001688|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1##AF478464|WDR77|79084|WD repeat domain 77##AF052183|WDR77|79084|WD repeat domain 77##AY225316|WDR77|79084|WD repeat domain 77##BC016946|WDR77|79084|WD repeat domain 77##NM_024102|WDR77|79084|WD repeat domain 77##BC001679|WDR77|79084|WD repeat domain 77##BC006477|WDR77|79084|WD repeat domain 77	0.998247	CTCF.p2:0:0.998
chr3	135222799	135222919	reg1008333.p1	11.268	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-708558	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-708708	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-853014	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	461672	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	461761	+	NM_181897 AK316258 L12146	518759	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.537884	CTCF.p2:25:0.538
chr5	125992231	125992362	reg1009853.p1	11.268	+	BC130495 BC130497 AK131015 NM_207408 HQ258080	-24881	+	AK023255 NM_032177 TSC_hg19_v1_chr5_+_125936641 BC021161 AK024065 AK298497 AK225464 CR457305 DQ893213 DQ896542	-55664	+	TSC_hg19_v1_chr5_-_125930891 AB489160 EU831757 EU831835 S74728 BC073174 BC071712 AK295526 BC002515 AK312459 AK297365 NM_001182 NM_001201377 NM_001202404	-61440	-	NM_005573 BC052951	120019	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	120535	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	120586	+	BC130495|C5orf48|389320|chromosome 5 open reading frame 48##BC130497|C5orf48|389320|chromosome 5 open reading frame 48##AK131015|C5orf48|389320|chromosome 5 open reading frame 48##NM_207408|C5orf48|389320|chromosome 5 open reading frame 48##HQ258080|C5orf48|389320|chromosome 5 open reading frame 48##AK023255|PHAX|51808|phosphorylated adaptor for RNA export##NM_032177|PHAX|51808|phosphorylated adaptor for RNA export##BC021161|PHAX|51808|phosphorylated adaptor for RNA export##AK024065|PHAX|51808|phosphorylated adaptor for RNA export##AK298497|PHAX|51808|phosphorylated adaptor for RNA export##AK225464|PHAX|51808|phosphorylated adaptor for RNA export##CR457305|PHAX|51808|phosphorylated adaptor for RNA export##DQ893213|PHAX|51808|phosphorylated adaptor for RNA export##DQ896542|PHAX|51808|phosphorylated adaptor for RNA export##EU831757|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##EU831835|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##S74728|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC073174|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC071712|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK295526|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC002515|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK312459|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK297365|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001182|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001201377|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001202404|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_005573|LMNB1|4001|lamin B1##BC052951|LMNB1|4001|lamin B1##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1##AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1	0.936139	CTCF.p2:-8:0.936
chr7	1798314	1798433	reg1009887.p1	11.268	+	NM_001128636	-49576	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-188552	+	AB067495 TSC_hg19_v1_chr7_+_1609735	-188640	+	TSC_hg19_v1_chr7_-_1980177 BC018870	181790	-	AK310481 TSC_hg19_v1_chr7_-_2272542	474162	-	TSC_hg19_v1_chr7_-_2272559 AF083811	474187	-	NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AB067495|KIAA1908|114796|uncharacterized LOC114796##BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AF083811|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.955202	CTCF.p2:16:0.955
chr19	5987475	5987614	reg1008986.p1	11.267	+	AK299856 TSC_hg19_v1_chr19_-_5978306 NM_003624 NM_007320 NM_007322	-9260	-	AK025300 AK299260 AK314343 TSC_hg19_v1_chr19_-_5978152	-9393	-	CU678680 DQ234346 AK308205 TSC_hg19_v1_chr19_-_5978122 BC004349 AL050149 AK222813 AK301942 Y08698 AK222990	-9432	-	TSC_hg19_v1_chr19_-_6110512 AK291196 BC071571 X76091	122979	-	TSC_hg19_v1_chr19_-_6110613 BC028579 AK303321 NM_000635 NM_134433	123068	-	AY009107 BC022027 AK093433 AX748123 AK302604 AJ577571 NM_030924 BC090046 AL136854	148209	+	AK299856|RANBP3|8498|RAN binding protein 3##NM_003624|RANBP3|8498|RAN binding protein 3##NM_007320|RANBP3|8498|RAN binding protein 3##NM_007322|RANBP3|8498|RAN binding protein 3##AK025300|RANBP3|8498|RAN binding protein 3##AK299260|RANBP3|8498|RAN binding protein 3##AK314343|RANBP3|8498|RAN binding protein 3##DQ234346|RANBP3|8498|RAN binding protein 3##AK308205|RANBP3|8498|RAN binding protein 3##BC004349|RANBP3|8498|RAN binding protein 3##AL050149|RANBP3|8498|RAN binding protein 3##AK222813|RANBP3|8498|RAN binding protein 3##AK301942|RANBP3|8498|RAN binding protein 3##Y08698|RANBP3|8498|RAN binding protein 3##AK222990|RANBP3|8498|RAN binding protein 3##AK291196|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC071571|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##X76091|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC028579|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK303321|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_000635|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_134433|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AY009107|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC022027|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK093433|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK302604|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AJ577571|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##NM_030924|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC090046|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AL136854|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2	0.994487	CTCF.p2:-5:0.994
chr20	9959154	9959292	reg1010010.p1	11.267	+	TSC_hg19_v1_chr20_-_9819519 AB040812 BC024179 AK291401 AK307926 AK095674 AK315820 NM_020341 NM_177990 AB033090 AX776013	-139656	-	TSC_hg19_v1_chr20_+_9495437 CU690786	-463761	+	AL121740 BC050727 TSC_hg19_v1_chr20_+_9495326	-463911	+	NM_022096 NM_198798 AK097689 TSC_hg19_v1_chr20_+_10015744 BC022878 BC028189 BC011591	56509	+	TSC_hg19_v1_chr20_+_10199575 NM_003081 NM_130811 AK094560 AK098347 D21267 AK223617 AK314359 AK289647 BC010647 BX647443 AK098767 L19760 L19761	240304	+	TSC_hg19_v1_chr20_-_10200139 AK124961	240920	-	AB040812|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##BC024179|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK291401|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK307926|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK095674|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK315820|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_020341|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_177990|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AB033090|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AX776013|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AL121740|LAMP5|24141|lysosomal-associated membrane protein family, member 5##BC050727|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_022096|ANKRD5|63926|ankyrin repeat domain 5##NM_198798|ANKRD5|63926|ankyrin repeat domain 5##AK097689|ANKRD5|63926|ankyrin repeat domain 5##BC022878|ANKRD5|63926|ankyrin repeat domain 5##BC028189|ANKRD5|63926|ankyrin repeat domain 5##BC011591|ANKRD5|63926|ankyrin repeat domain 5##NM_003081|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_130811|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK094560|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098347|SNAP25|6616|synaptosomal-associated protein, 25kDa##D21267|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK223617|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK314359|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK289647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BC010647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BX647443|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098767|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19760|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19761|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK124961|LOC100131208|100131208|uncharacterized LOC100131208	0.0	
chr1	85493499	85493634	reg1008180.p1	11.266	+	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	-30858	-	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	-134680	-	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-337490	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	20579	-	TSC_hg19_v1_chr1_-_85514184 BX647497 AK314354 NM_001253693 NM_018298	20632	-	NM_145172 AY049724 AK292603 AK054629 BC040265	34443	+	BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3##BX647497|MCOLN3|55283|mucolipin 3##AK314354|MCOLN3|55283|mucolipin 3##NM_001253693|MCOLN3|55283|mucolipin 3##NM_018298|MCOLN3|55283|mucolipin 3##NM_145172|WDR63|126820|WD repeat domain 63##AY049724|WDR63|126820|WD repeat domain 63##AK292603|WDR63|126820|WD repeat domain 63##AK054629|WDR63|126820|WD repeat domain 63##BC040265|WDR63|126820|WD repeat domain 63	0.237987	CTCF.p2:28:0.238
chr20	45149785	45149892	reg1008724.p1	11.266	+	AK001331 AK095611 BC024177 NM_018102 NM_199441 BC026321 TSC_hg19_v1_chr20_-_45142199	-7643	-	AL831934 TSC_hg19_v1_chr20_-_45087948	-61907	-	TSC_hg19_v1_chr20_-_45061554 AK293861	-88210	-	NM_080721 TSC_hg19_v1_chr20_-_45179294	29415	-	DQ892655 DQ895894 AF154121 AY072810 AK293902 AK056713 AK295748 AK315131 BC035966 NM_001193339 NM_001193342 NM_022829 TSC_hg19_v1_chr20_-_45280099	130243	-	TSC_hg19_v1_chr20_-_45313125 AK096658 NM_001011554 NM_001193340	163286	-	AK001331|ZNF334|55713|zinc finger protein 334##AK095611|ZNF334|55713|zinc finger protein 334##BC024177|ZNF334|55713|zinc finger protein 334##NM_018102|ZNF334|55713|zinc finger protein 334##NM_199441|ZNF334|55713|zinc finger protein 334##BC026321|ZNF334|55713|zinc finger protein 334##AL831934|ZNF663|100130934|zinc finger protein 663##AK293861|ELMO2|63916|engulfment and cell motility 2##NM_080721|C20orf123|128506|chromosome 20 open reading frame 123##DQ892655|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##DQ895894|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AF154121|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AY072810|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK293902|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK056713|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK295748|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK315131|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##BC035966|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193339|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193342|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_022829|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK096658|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001011554|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193340|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3	0.727876	CTCF.p2:-26:0.728
chr7	149757733	149757855	reg1009909.p1	11.266	+	TSC_hg19_v1_chr7_+_149571066 BX640846 AK290086 AK094602 AK098362 AK172725 DQ995344 AY037164	-186713	+	BC023225 TSC_hg19_v1_chr7_-_149570892 BC028735	-186899	-	TSC_hg19_v1_chr7_+_149570049 AF452639 AK057700 NM_001100592 NM_145230	-187752	+	AB039791 NM_001164459	242274	-	TSC_hg19_v1_chr7_+_150020443 NM_001142928 NM_023942 AK055954	262610	+	TSC_hg19_v1_chr7_+_150020552 BC001354	262782	+	BX640846|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK290086|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK094602|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK098362|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK172725|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##DQ995344|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AY037164|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##BC023225|LOC401431|401431|uncharacterized LOC401431##BC028735|LOC401431|401431|uncharacterized LOC401431##AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AB039791|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)##NM_001164459|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)##NM_001142928|LRRC61|65999|leucine rich repeat containing 61##NM_023942|LRRC61|65999|leucine rich repeat containing 61##AK055954|LRRC61|65999|leucine rich repeat containing 61##BC001354|LRRC61|65999|leucine rich repeat containing 61	0.969943	CTCF.p2:-17:0.970
chr14	33057813	33057928	reg1009518.p1	11.264	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-259334	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-511364	+	TSC_hg19_v1_chr14_+_32546223 BC075799	-511625	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	350620	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	1362279	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	1873617	-	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A	0.873698	CTCF.p2:-15:0.644	CTCF.p2:-16:0.230
chr22	36541242	36541356	reg1008544.p2	11.264	+	AY072786 DQ778625 TSC_hg19_v1_chr22_-_36424553 AK055213 NM_001082578 NM_001082579	-116760	-	TSC_hg19_v1_chr22_-_36236476 AF229058 AL009266 AK314632 BC013115 BC025281 AK291460 NM_001031695 NM_001082576 NM_001082577 NM_014309	-304774	-	CR456559 TSC_hg19_v1_chr22_-_36236341	-304959	-	BC042918 BC038352 AK025349 AF070675 BC070144 AF305227 BC050596 AY014902 AY014903 AY014904 AY014905 NM_145640	15579	-	AY014906 AY014907 NM_145641 NM_145642	20925	-	AK290466 BC006276 AK313637 AK311506 AY014914 AY014915 NM_030643 NM_145660	59519	-	AY072786|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ778625|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK055213|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082578|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082579|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC042918|APOL3|80833|apolipoprotein L, 3##BC038352|APOL3|80833|apolipoprotein L, 3##AK025349|APOL3|80833|apolipoprotein L, 3##AF070675|APOL3|80833|apolipoprotein L, 3##AF305227|APOL3|80833|apolipoprotein L, 3##BC050596|APOL3|80833|apolipoprotein L, 3##AY014902|APOL3|80833|apolipoprotein L, 3##AY014903|APOL3|80833|apolipoprotein L, 3##AY014904|APOL3|80833|apolipoprotein L, 3##AY014905|APOL3|80833|apolipoprotein L, 3##NM_145640|APOL3|80833|apolipoprotein L, 3##AY014906|APOL3|80833|apolipoprotein L, 3##AY014907|APOL3|80833|apolipoprotein L, 3##NM_145641|APOL3|80833|apolipoprotein L, 3##NM_145642|APOL3|80833|apolipoprotein L, 3##AK290466|APOL4|80832|apolipoprotein L, 4##BC006276|APOL4|80832|apolipoprotein L, 4##AK313637|APOL4|80832|apolipoprotein L, 4##AK311506|APOL4|80832|apolipoprotein L, 4##AY014914|APOL4|80832|apolipoprotein L, 4##AY014915|APOL4|80832|apolipoprotein L, 4##NM_030643|APOL4|80832|apolipoprotein L, 4##NM_145660|APOL4|80832|apolipoprotein L, 4	0.997588	CTCF.p2:-9:0.998
chr1	110630818	110630926	reg1008251.p1	11.263	+	AF008203 BC112007 BC113428 NM_006492	-17595	-	AK291059 TSC_hg19_v1_chr1_+_110577249 AL834196 AB051548 AB463038	-53619	+	BC094786 TSC_hg19_v1_chr1_+_110577243	-53630	+	AK098556 NM_203412 BC058929	24203	+	NM_001010898 AK289982 TSC_hg19_v1_chr1_+_110693135	62262	+	TSC_hg19_v1_chr1_+_110753347 NM_001039574 NM_004978	122472	+	AF008203|ALX3|257|ALX homeobox 3##BC112007|ALX3|257|ALX homeobox 3##BC113428|ALX3|257|ALX homeobox 3##NM_006492|ALX3|257|ALX homeobox 3##AK291059|FAM40A|85369|family with sequence similarity 40, member A##AL834196|FAM40A|85369|family with sequence similarity 40, member A##AB051548|FAM40A|85369|family with sequence similarity 40, member A##BC094786|FAM40A|85369|family with sequence similarity 40, member A##AK098556|UBL4B|164153|ubiquitin-like 4B##NM_203412|UBL4B|164153|ubiquitin-like 4B##BC058929|UBL4B|164153|ubiquitin-like 4B##NM_001010898|SLC6A17|388662|solute carrier family 6, member 17##AK289982|SLC6A17|388662|solute carrier family 6, member 17##NM_001039574|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_004978|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4	0.29894	CTCF.p2:7:0.299
chr17	1961906	1962040	reg1008420.p1	11.261	+	DQ187313 NM_001098202	-2416	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-3575	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-16665	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	244839	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	245067	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	245279	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.748097	CTCF.p2:8:0.748
chr3	192284621	192284739	reg1007430.p1	11.261	+	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-157837	-	AY858112 NM_001083308	-1105729	+	AK090630 AX746546 NM_198152	-1236356	-	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	160685	-	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	350956	-	BC036194 BC045582 NM_178496	351261	-	AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing##AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2	0.490069	CTCF.p2:-17:0.490
chr5	180296110	180296251	reg1008811.p2	11.260	+	AK295714 TSC_hg19_v1_chr5_-_180288277 AK303450 BC029573 AK091376 AX746945 NM_001172638 NM_152283	-7889	-	TSC_hg19_v1_chr5_+_180258018 BC047586	-38175	+	TSC_hg19_v1_chr5_+_180257959 AK308536	-38228	+	NM_001040462 NM_001159707 NM_001159708 NM_001159709 NM_024850 AK296597 AY358523 AK025111 AK225213 BC119696 BC119697	29994	+	AK298687 NM_001159710 AK309639 AK308012	40390	+	NM_197975 AK025267 AY358385 BC100800 BC100801 BC100802	119721	+	AK295714|ZFP62|643836|zinc finger protein 62 homolog (mouse)##AK303450|ZFP62|643836|zinc finger protein 62 homolog (mouse)##BC029573|ZFP62|643836|zinc finger protein 62 homolog (mouse)##AK091376|ZFP62|643836|zinc finger protein 62 homolog (mouse)##NM_001172638|ZFP62|643836|zinc finger protein 62 homolog (mouse)##NM_152283|ZFP62|643836|zinc finger protein 62 homolog (mouse)##BC047586|LOC729678|729678|uncharacterized LOC729678##NM_001040462|BTNL8|79908|butyrophilin-like 8##NM_001159707|BTNL8|79908|butyrophilin-like 8##NM_001159708|BTNL8|79908|butyrophilin-like 8##NM_001159709|BTNL8|79908|butyrophilin-like 8##NM_024850|BTNL8|79908|butyrophilin-like 8##AK296597|BTNL8|79908|butyrophilin-like 8##AY358523|BTNL8|79908|butyrophilin-like 8##AK025111|BTNL8|79908|butyrophilin-like 8##AK225213|BTNL8|79908|butyrophilin-like 8##BC119696|BTNL8|79908|butyrophilin-like 8##BC119697|BTNL8|79908|butyrophilin-like 8##AK298687|BTNL8|79908|butyrophilin-like 8##NM_001159710|BTNL8|79908|butyrophilin-like 8##AK309639|BTNL8|79908|butyrophilin-like 8##AK308012|BTNL8|79908|butyrophilin-like 8##NM_197975|BTNL3|10917|butyrophilin-like 3##AK025267|BTNL3|10917|butyrophilin-like 3##AY358385|BTNL3|10917|butyrophilin-like 3##BC100800|BTNL3|10917|butyrophilin-like 3##BC100801|BTNL3|10917|butyrophilin-like 3##BC100802|BTNL3|10917|butyrophilin-like 3	0.0	
chr14	52246917	52247042	reg1008582.p1	11.259	+	TSC_hg19_v1_chr14_+_52118627 BX161430 NM_152330 BC020521 AK315764 AK055545 BX647863	-128349	+	AL833158 NM_001042481	-291125	+	NM_030755 AB048246 TSC_hg19_v1_chr14_+_51706980 AK302416 BC036460 BC016769 BC050366 AK075395 BC032834 AK303134 AL080080 BC056874 AY358640 AK312905 DQ891674 DQ894860 CU690352	-540030	+	NM_001243773 NM_001243774 NM_053064 AK092371	80097	+	TSC_hg19_v1_chr14_+_52327329 AK307171	80344	+	AK001024 AK311334 TSC_hg19_v1_chr14_+_52327363	80385	+	BX161430|FRMD6|122786|FERM domain containing 6##NM_152330|FRMD6|122786|FERM domain containing 6##BC020521|FRMD6|122786|FERM domain containing 6##AK315764|FRMD6|122786|FERM domain containing 6##AK055545|FRMD6|122786|FERM domain containing 6##BX647863|FRMD6|122786|FERM domain containing 6##AL833158|FRMD6|122786|FERM domain containing 6##NM_001042481|FRMD6|122786|FERM domain containing 6##NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1##AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1##BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1##BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1##BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1##AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1##BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1##AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1##AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1##BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1##AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1##AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1##NM_001243773|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_001243774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	0.998445	CTCF.p2:20:0.998
chr17	5100388	5100506	reg1007855.p1	11.259	+	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-5067	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-5274	-	AY143550 NM_004505 X63546 X63547	-68761	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	37654	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	85219	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	222478	-	AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##AY143550|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##NM_004505|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63546|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63547|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa	0.996744	CTCF.p2:-4:0.997
chr17	67519518	67519650	reg1009690.p1	11.259	+	TSC_hg19_v1_chr17_+_67498396 U39064	-21104	+	AK290747 NM_002758 U39065 AK225719 X96757 BC012009	-108708	+	TSC_hg19_v1_chr17_-_67323275 BC029426 AJ512612 AJ275973 AK292592 NM_172232	-196295	-	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	551846	+	BC033038 NM_170742	581410	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	646112	+	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6##NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6##U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6##X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC029426|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ512612|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ275973|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AK292592|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_172232|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2	0.448069	CTCF.p2:4:0.448
chr20	24764859	24764982	reg1009223.p1	11.259	+	TSC_hg19_v1_chr20_+_24450295 BC030637	-314618	+	AK024282 NM_024893	-315086	+	BC040904 NM_178311	-795505	-	TSC_hg19_v1_chr20_+_24929865 NM_003650	164943	+	TSC_hg19_v1_chr20_+_24929907 AF031824 BC015507 AB015225 CU677327 BT009825 AF036342 CR541860 CR541878	165102	+	TSC_hg19_v1_chr20_-_24973355 CU678464 BC003501	208410	-	BC030637|SYNDIG1|79953|synapse differentiation inducing 1##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1##BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_003650|CST7|8530|cystatin F (leukocystatin)##AF031824|CST7|8530|cystatin F (leukocystatin)##BC015507|CST7|8530|cystatin F (leukocystatin)##AB015225|CST7|8530|cystatin F (leukocystatin)##BT009825|CST7|8530|cystatin F (leukocystatin)##AF036342|CST7|8530|cystatin F (leukocystatin)##CR541860|CST7|8530|cystatin F (leukocystatin)##CR541878|CST7|8530|cystatin F (leukocystatin)##BC003501|C20orf3|57136|chromosome 20 open reading frame 3	0.832482	CTCF.p2:-8:0.832
chr2	134644341	134644466	reg1009349.p1	11.259	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-318365	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-465049	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-1104709	-	NM_002410 D17716 AF113921	367482	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	832153	-	AK125008 NM_138326 BC016018 BC107420 AB071418	951815	+	AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	0.996732	CTCF.p2:-9:0.997
chr8_gl000196_random	1708	1825	reg1007546.p2	11.259	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.616313	CTCF.p2:10:0.616
chr10	102973526	102973631	reg1008498.p1	11.258	+	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-82400	+	BC019674 NM_001085398	-82676	-	TSC_hg19_v1_chr10_+_102821745 BC007758 AY359087 AK225949 AK172862	-151919	+	BC136321 BC069156 NM_006562 X90828	15124	-	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	140294	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	374351	-	BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##BC007758|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AY359087|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK225949|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172862|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda	0.857945	CTCF.p2:-6:0.858
chr11	74437740	74437858	reg1010718.p1	11.258	+	AK302677 AK316370 D26018 NM_006591 TSC_hg19_v1_chr11_+_74303654 BC092454 AK316301 BC108908 BC108909 BC032636 BC058840 BC041703 AB383722	-134136	+	TSC_hg19_v1_chr11_-_74204756 NM_001144869	-233049	-	CR936625 DQ192291 NM_005472	-259203	-	NM_015424 AK304519 AY358522 AY279090 AY279091	4406	-	BC142623 TSC_hg19_v1_chr11_-_74442472	4654	-	TSC_hg19_v1_chr11_+_74459915 AB082522 NM_001098638	22109	+	AK302677|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316370|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##D26018|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_006591|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC092454|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316301|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108908|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108909|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC032636|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC058840|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC041703|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_001144869|LIPT2|387787|lipoyl(octanoyl) transferase 2 (putative)##CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_015424|CHRDL2|25884|chordin-like 2##AK304519|CHRDL2|25884|chordin-like 2##AY358522|CHRDL2|25884|chordin-like 2##AY279090|CHRDL2|25884|chordin-like 2##AY279091|CHRDL2|25884|chordin-like 2##BC142623|CHRDL2|25884|chordin-like 2##AB082522|RNF169|254225|ring finger protein 169##NM_001098638|RNF169|254225|ring finger protein 169	0.259189	CTCF.p2:1:0.259
chr14	39576875	39577003	reg1011394.p1	11.258	+	TSC_hg19_v1_chr14_-_39572440 AK299862 BC036649 NM_006364 AK303485	-4506	-	AK293944 TSC_hg19_v1_chr14_-_39572386 AK312259 X97064	-4595	-	AY358395 BX248017 NM_175060	-851383	-	AF027150 NM_001009182 NM_001009183 NM_003616 BC028095 BC104968 AK313947 AB037701 AB037702 AB037703	6528	+	AK310730 TSC_hg19_v1_chr14_-_39639538 AK294339 AL833179 BC047328 BX161510 AK315900 BX248013 AK056690 NM_001079537 NM_177452 BC030604	62633	-	TSC_hg19_v1_chr14_+_39644403 NM_002687 AK292579 AK223612 U77718 BC062602 Y09703 Y10351	67490	+	AK299862|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##BC036649|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##NM_006364|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK303485|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK293944|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK312259|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##X97064|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AY358395|CLEC14A|161198|C-type lectin domain family 14, member A##BX248017|CLEC14A|161198|C-type lectin domain family 14, member A##NM_175060|CLEC14A|161198|C-type lectin domain family 14, member A##AF027150|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_001009182|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_001009183|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_003616|GEMIN2|8487|gem (nuclear organelle) associated protein 2##BC028095|GEMIN2|8487|gem (nuclear organelle) associated protein 2##BC104968|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AK313947|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037701|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037702|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037703|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AK310730|TRAPPC6B|122553|trafficking protein particle complex 6B##AK294339|TRAPPC6B|122553|trafficking protein particle complex 6B##AL833179|TRAPPC6B|122553|trafficking protein particle complex 6B##BC047328|TRAPPC6B|122553|trafficking protein particle complex 6B##BX161510|TRAPPC6B|122553|trafficking protein particle complex 6B##AK315900|TRAPPC6B|122553|trafficking protein particle complex 6B##BX248013|TRAPPC6B|122553|trafficking protein particle complex 6B##AK056690|TRAPPC6B|122553|trafficking protein particle complex 6B##NM_001079537|TRAPPC6B|122553|trafficking protein particle complex 6B##NM_177452|TRAPPC6B|122553|trafficking protein particle complex 6B##BC030604|TRAPPC6B|122553|trafficking protein particle complex 6B##NM_002687|PNN|5411|pinin, desmosome associated protein##AK292579|PNN|5411|pinin, desmosome associated protein##AK223612|PNN|5411|pinin, desmosome associated protein##U77718|PNN|5411|pinin, desmosome associated protein##BC062602|PNN|5411|pinin, desmosome associated protein##Y09703|PNN|5411|pinin, desmosome associated protein	0.928376	CTCF.p2:0:0.928
chr2	179756279	179756408	reg1010476.p1	11.258	+	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-84240	-	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	-96642	-	TSC_hg19_v1_chr2_+_179387947 AK093733	-368383	+	AL832777 NM_173648	158442	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	373062	-	AK057999 NM_001113398	670971	-	X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##X98114|TTN|7273|titin##X98115|TTN|7273|titin##AK093733|LOC100506866|100506866|uncharacterized LOC100506866##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B	0.327169	CTCF.p2:-2:0.327
chr1	159750427	159750540	reg1007807.p2	11.257	+	M35163 BC125135 X56214 X56692 AK289443 AK313624 BC020766 BC070257 NM_000567	-66157	-	BC007039 BC007058 BC070178 NM_001639 X04608 TSC_hg19_v1_chr1_+_159557615 AB587585 BT006750 CR450313 CU675509 M10944	-192820	+	AB529280 NM_001004469 BC137025 BC137026	-244665	-	TSC_hg19_v1_chr1_+_159750758 AK000449 NM_017823 BC001140 AB164404 AF086553	391	+	NM_001004310 AY212514 AY654627 AY654628 AY513661	21710	+	NM_020125 TSC_hg19_v1_chr1_+_159796486	46000	+	M35163|CRP|1401|C-reactive protein, pentraxin-related##BC125135|CRP|1401|C-reactive protein, pentraxin-related##X56214|CRP|1401|C-reactive protein, pentraxin-related##X56692|CRP|1401|C-reactive protein, pentraxin-related##AK289443|CRP|1401|C-reactive protein, pentraxin-related##AK313624|CRP|1401|C-reactive protein, pentraxin-related##BC020766|CRP|1401|C-reactive protein, pentraxin-related##BC070257|CRP|1401|C-reactive protein, pentraxin-related##NM_000567|CRP|1401|C-reactive protein, pentraxin-related##BC007039|APCS|325|amyloid P component, serum##BC007058|APCS|325|amyloid P component, serum##BC070178|APCS|325|amyloid P component, serum##NM_001639|APCS|325|amyloid P component, serum##X04608|APCS|325|amyloid P component, serum##BT006750|APCS|325|amyloid P component, serum##CR450313|APCS|325|amyloid P component, serum##M10944|APCS|325|amyloid P component, serum##NM_001004469|OR10J5|127385|olfactory receptor, family 10, subfamily J, member 5##BC137025|OR10J5|127385|olfactory receptor, family 10, subfamily J, member 5##BC137026|OR10J5|127385|olfactory receptor, family 10, subfamily J, member 5##AK000449|DUSP23|54935|dual specificity phosphatase 23##NM_017823|DUSP23|54935|dual specificity phosphatase 23##BC001140|DUSP23|54935|dual specificity phosphatase 23##AB164404|DUSP23|54935|dual specificity phosphatase 23##AF086553|DUSP23|54935|dual specificity phosphatase 23##NM_001004310|FCRL6|343413|Fc receptor-like 6##AY212514|FCRL6|343413|Fc receptor-like 6##AY654627|FCRL6|343413|Fc receptor-like 6##AY654628|FCRL6|343413|Fc receptor-like 6##AY513661|FCRL6|343413|Fc receptor-like 6##NM_020125|SLAMF8|56833|SLAM family member 8	0.172987	
chr13	22212531	22212645	reg1007111.p1	11.257	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-34228	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-34279	-	TSC_hg19_v1_chr13_-_22033510 BC067898 NM_153251 BC034944	-179081	-	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	32560	+	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	1542527	+	TSC_hg19_v1_chr13_-_23949652 AK125458	1737062	-	NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##BC067898|ZDHHC20|253832|zinc finger, DHHC-type containing 20##NM_153251|ZDHHC20|253832|zinc finger, DHHC-type containing 20##BC034944|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.958984	CTCF.p2:-19:0.959
chr19	49947104	49947241	reg1000604.p2	11.257	+	AK294226 AB032436 TSC_hg19_v1_chr19_-_49944785 BC059379 NM_020309	-2426	-	NM_001195256	-17485	+	AY048588 BC093995 BC093997 AY037555 NM_178449	-20525	-	TSC_hg19_v1_chr19_-_49955072 AK294687 BC001108 AK000650 AK304476 NM_017916	7897	-	NM_001145396 NM_153329 TSC_hg19_v1_chr19_+_49956479 AK298587 AK074136	9309	+	AK297101 TSC_hg19_v1_chr19_+_49956529 BC014895 AK024182 AK301246	9358	+	AK294226|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##AB032436|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##BC059379|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##NM_020309|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##NM_001195256|LOC100507003|100507003|uncharacterized LOC100507003##AY048588|PTH2|113091|parathyroid hormone 2##BC093995|PTH2|113091|parathyroid hormone 2##BC093997|PTH2|113091|parathyroid hormone 2##AY037555|PTH2|113091|parathyroid hormone 2##NM_178449|PTH2|113091|parathyroid hormone 2##AK294687|PIH1D1|55011|PIH1 domain containing 1##BC001108|PIH1D1|55011|PIH1 domain containing 1##AK000650|PIH1D1|55011|PIH1 domain containing 1##AK304476|PIH1D1|55011|PIH1 domain containing 1##NM_017916|PIH1D1|55011|PIH1 domain containing 1##NM_001145396|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##NM_153329|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK298587|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK074136|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK297101|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##BC014895|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK024182|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK301246|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1	0.999539	CTCF.p2:7:1.000
chr5	67582259	67582427	reg1007940.p2	11.257	+	TSC_hg19_v1_chr5_+_67511602 BC094795	-70736	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	-70763	+	BC109069 BC109070 D83597 NM_005582 AK313177	-1089743	-	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	1951	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	4203	+	AK094785 NM_001242466 AK294919	6109	+	BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.966327	CTCF.p2:-11:0.966
chr11	65149829	65149979	reg1010350.p1	11.256	+	NM_145719	-27623	+	TSC_hg19_v1_chr11_+_65101347 BC014889 AK291944 U94585 AB463002 BT006718 DQ892397 DQ895612	-48553	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	-48620	+	BC036869 BX648573 NM_001077241 NM_182556	220	-	NM_031904 TSC_hg19_v1_chr11_+_65154083 BC021094	4160	+	TSC_hg19_v1_chr11_+_65154127 AK074850 BC033851 AK056778 BC044658 AK291678 AK304363 BC051695	4207	+	NM_145719|TIGD3|220359|tigger transposable element derived 3##BC014889|DPF2|5977|D4, zinc and double PHD fingers family 2##AK291944|DPF2|5977|D4, zinc and double PHD fingers family 2##U94585|DPF2|5977|D4, zinc and double PHD fingers family 2##BT006718|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ892397|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ895612|DPF2|5977|D4, zinc and double PHD fingers family 2##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2##BC036869|SLC25A45|283130|solute carrier family 25, member 45##BX648573|SLC25A45|283130|solute carrier family 25, member 45##NM_001077241|SLC25A45|283130|solute carrier family 25, member 45##NM_182556|SLC25A45|283130|solute carrier family 25, member 45##NM_031904|FRMD8|83786|FERM domain containing 8##AK074850|FRMD8|83786|FERM domain containing 8##BC033851|FRMD8|83786|FERM domain containing 8##AK056778|FRMD8|83786|FERM domain containing 8##BC044658|FRMD8|83786|FERM domain containing 8##AK291678|FRMD8|83786|FERM domain containing 8##AK304363|FRMD8|83786|FERM domain containing 8##BC051695|FRMD8|83786|FERM domain containing 8	1.020288	CTCF.p2:-17:0.995
chr7	26540502	26540627	reg1007669.p2	11.256	+	TSC_hg19_v1_chr7_+_26438248 AK056484	-102302	+	AK309162 NM_001199838	-136620	+	NM_001199837 AK307905	-140036	+	AK093321 AX748054 NM_001145531	136925	+	AF072166 AJ004886 AB528968 DQ892896 DQ896144 AB014486 TSC_hg19_v1_chr7_-_26904210 BC002893 AK222885 AK313209 BC036044 AF051323 NM_003930	363629	-	S79869 S79871 S79910 U37431 AB464569 CU689416 DQ890884 DQ894038 U10421 AK308067 BC032547 AK313514 NM_005522 NM_153620	595010	-	AK056484|LOC441204|441204|uncharacterized LOC441204##AK309162|SNX10|29887|sorting nexin 10##NM_001199838|SNX10|29887|sorting nexin 10##NM_001199837|SNX10|29887|sorting nexin 10##AK307905|SNX10|29887|sorting nexin 10##AK093321|C7orf71|285941|chromosome 7 open reading frame 71##NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71##AF072166|SKAP2|8935|src kinase associated phosphoprotein 2##AJ004886|SKAP2|8935|src kinase associated phosphoprotein 2##DQ892896|SKAP2|8935|src kinase associated phosphoprotein 2##DQ896144|SKAP2|8935|src kinase associated phosphoprotein 2##AB014486|SKAP2|8935|src kinase associated phosphoprotein 2##BC002893|SKAP2|8935|src kinase associated phosphoprotein 2##AK222885|SKAP2|8935|src kinase associated phosphoprotein 2##AK313209|SKAP2|8935|src kinase associated phosphoprotein 2##BC036044|SKAP2|8935|src kinase associated phosphoprotein 2##AF051323|SKAP2|8935|src kinase associated phosphoprotein 2##NM_003930|SKAP2|8935|src kinase associated phosphoprotein 2##S79869|HOXA1|3198|homeobox A1##S79871|HOXA1|3198|homeobox A1##S79910|HOXA1|3198|homeobox A1##U37431|HOXA1|3198|homeobox A1##DQ890884|HOXA1|3198|homeobox A1##DQ894038|HOXA1|3198|homeobox A1##U10421|HOXA1|3198|homeobox A1##AK308067|HOXA1|3198|homeobox A1##BC032547|HOXA1|3198|homeobox A1##AK313514|HOXA1|3198|homeobox A1##NM_005522|HOXA1|3198|homeobox A1##NM_153620|HOXA1|3198|homeobox A1	0.990868	CTCF.p2:12:0.991
chr15	74782277	74782366	reg1007909.p2	11.255	+	TSC_hg19_v1_chr15_+_74753647 BC014373 AF085896	-28670	+	TSC_hg19_v1_chr15_-_74753521 BC030055 NM_032907 NM_201265	-28809	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	-28874	-	AK302034 TSC_hg19_v1_chr15_+_74833575 BC045545 NM_006465 AF116846 AK298716 BC041792 AB208830 BC060824	51239	+	L29217 L29220 NM_003992	118391	+	AK091692 AX747131 NM_001130028	125013	+	BC014373|LOC440288|440288|uncharacterized LOC440288##AF085896|LOC440288|440288|uncharacterized LOC440288##BC030055|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##NM_032907|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##NM_201265|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##AK302034|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##BC045545|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##NM_006465|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##AF116846|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##AK298716|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##BC041792|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##AB208830|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##BC060824|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##L29217|CLK3|1198|CDC-like kinase 3##L29220|CLK3|1198|CDC-like kinase 3##NM_003992|CLK3|1198|CDC-like kinase 3##AK091692|CLK3|1198|CDC-like kinase 3##NM_001130028|CLK3|1198|CDC-like kinase 3	0.999804	CTCF.p2:11:1.000
chr22	46959347	46959483	reg1007675.p1	11.255	+	AF231024 NM_014246 TSC_hg19_v1_chr22_-_46933142	-26301	-	TSC_hg19_v1_chr22_+_46731810 AK303020	-227605	+	TSC_hg19_v1_chr22_+_46731615 AB178028 AK001002 AK295173 AK290712 BC066593 BC080631 CR456445 BC027991 BC012076 AB463324 CU013043 CU013331	-227786	+	CR456470 NM_015124 BC129837 AB463563 CU013020 CU013308	63261	+	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	174664	-	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	174740	-	AF231024|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##NM_014246|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##AK303020|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AB178028|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK001002|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK295173|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK290712|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC066593|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC080631|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456445|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC027991|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC012076|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013043|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013331|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456470|GRAMD4|23151|GRAM domain containing 4##NM_015124|GRAMD4|23151|GRAM domain containing 4##BC129837|GRAMD4|23151|GRAM domain containing 4##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase	0.861105	CTCF.p2:-12:0.861
chr2	55242231	55242361	reg1008647.p2	11.255	+	AJ251385 AM392753 AM393122 AM393280 AM393537 BC139928 DQ778739 AF087901 BC014366 TSC_hg19_v1_chr2_-_55237387 BC007109 AF177332 AF132048 BC001035 AF077050 AF125103 NM_007008 AY102276	-4924	-	TSC_hg19_v1_chr2_-_55199899 BC131571	-42388	-	NM_001039753	-290148	+	AK302741 AF333336 NM_207521 AY123248	34014	-	TSC_hg19_v1_chr2_-_55277421 AF320999 AJ251383 AJ251384 CU687182 AM393104 AM393557 BC010737	35135	-	TSC_hg19_v1_chr2_-_55277585 AK130812 AB015639 BC071848 AB020693 BC152425 AF148537 AF148538 AK098385 BC012619	35226	-	AJ251385|RTN4|57142|reticulon 4##AM392753|RTN4|57142|reticulon 4##AM393122|RTN4|57142|reticulon 4##AM393280|RTN4|57142|reticulon 4##AM393537|RTN4|57142|reticulon 4##BC139928|RTN4|57142|reticulon 4##DQ778739|RTN4|57142|reticulon 4##AF087901|RTN4|57142|reticulon 4##BC014366|RTN4|57142|reticulon 4##BC007109|RTN4|57142|reticulon 4##AF177332|RTN4|57142|reticulon 4##AF132048|RTN4|57142|reticulon 4##BC001035|RTN4|57142|reticulon 4##AF077050|RTN4|57142|reticulon 4##AF125103|RTN4|57142|reticulon 4##NM_007008|RTN4|57142|reticulon 4##AY102276|RTN4|57142|reticulon 4##NM_001039753|EML6|400954|echinoderm microtubule associated protein like 6##AK302741|RTN4|57142|reticulon 4##AF333336|RTN4|57142|reticulon 4##NM_207521|RTN4|57142|reticulon 4##AY123248|RTN4|57142|reticulon 4##AF320999|RTN4|57142|reticulon 4##AJ251383|RTN4|57142|reticulon 4##AJ251384|RTN4|57142|reticulon 4##AM393104|RTN4|57142|reticulon 4##AM393557|RTN4|57142|reticulon 4##BC010737|RTN4|57142|reticulon 4##AK130812|RTN4|57142|reticulon 4##AB015639|RTN4|57142|reticulon 4##BC071848|RTN4|57142|reticulon 4##AB020693|RTN4|57142|reticulon 4##BC152425|RTN4|57142|reticulon 4##AF148537|RTN4|57142|reticulon 4##AF148538|RTN4|57142|reticulon 4##AK098385|RTN4|57142|reticulon 4##BC012619|RTN4|57142|reticulon 4	0.969243	CTCF.p2:-15:0.969
chrX	118400495	118400600	reg1007818.p1	11.255	+	TSC_hg19_v1_chrX_+_118370247 NM_006667 AK313956 Y12711 BC034238 AK293618 DQ891774 DQ894958 CR456993	-30282	+	NM_020721	-116006	-	TSC_hg19_v1_chrX_+_118109314 AK026265	-291209	+	NM_145305 TSC_hg19_v1_chrX_+_118533308 AK094254 BC071871	132740	+	TSC_hg19_v1_chrX_+_118533353 AK091304 AK303932 AX746905 AK292035 CU676444 AL590525	132859	+	NM_001152 TSC_hg19_v1_chrX_+_118602390 AK315292	201829	+	NM_006667|PGRMC1|10857|progesterone receptor membrane component 1##AK313956|PGRMC1|10857|progesterone receptor membrane component 1##Y12711|PGRMC1|10857|progesterone receptor membrane component 1##BC034238|PGRMC1|10857|progesterone receptor membrane component 1##AK293618|PGRMC1|10857|progesterone receptor membrane component 1##DQ891774|PGRMC1|10857|progesterone receptor membrane component 1##DQ894958|PGRMC1|10857|progesterone receptor membrane component 1##CR456993|PGRMC1|10857|progesterone receptor membrane component 1##NM_020721|KIAA1210|57481|KIAA1210##AK026265|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_145305|SLC25A43|203427|solute carrier family 25, member 43##AK094254|SLC25A43|203427|solute carrier family 25, member 43##BC071871|SLC25A43|203427|solute carrier family 25, member 43##AK091304|SLC25A43|203427|solute carrier family 25, member 43##AK303932|SLC25A43|203427|solute carrier family 25, member 43##AK292035|SLC25A43|203427|solute carrier family 25, member 43##AL590525|SLC25A43|203427|solute carrier family 25, member 43##NM_001152|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##AK315292|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5	0.698066	CTCF.p2:-1:0.698
chr15	34402396	34402527	reg1009790.p1	11.254	+	AK057200 NM_152595 BC130441	-8180	+	TSC_hg19_v1_chr15_-_34394073 AJ245874 AK314883 BC104934 BC104936	-8358	-	BC012456 TSC_hg19_v1_chr15_-_34394064 AJ250344 NM_020154 AY358445	-8420	-	BC026234 AL136908 TSC_hg19_v1_chr15_-_34502237 AK293021 BC111000 AK297904	99764	-	BC037234 TSC_hg19_v1_chr15_-_34502298 AL833631 AK293695 AK311338 NM_024713	99840	-	TSC_hg19_v1_chr15_+_34517216 AK290524 AK075227 AK296184 BC016348 BC002583 AF151018 NM_016454 AY336092	114779	+	AK057200|PGBD4|161779|piggyBac transposable element derived 4##NM_152595|PGBD4|161779|piggyBac transposable element derived 4##BC130441|PGBD4|161779|piggyBac transposable element derived 4##AJ245874|C15orf24|56851|chromosome 15 open reading frame 24##AK314883|C15orf24|56851|chromosome 15 open reading frame 24##BC104934|C15orf24|56851|chromosome 15 open reading frame 24##BC104936|C15orf24|56851|chromosome 15 open reading frame 24##BC012456|C15orf24|56851|chromosome 15 open reading frame 24##AJ250344|C15orf24|56851|chromosome 15 open reading frame 24##NM_020154|C15orf24|56851|chromosome 15 open reading frame 24##AY358445|C15orf24|56851|chromosome 15 open reading frame 24##BC026234|C15orf29|79768|chromosome 15 open reading frame 29##AL136908|C15orf29|79768|chromosome 15 open reading frame 29##AK293021|C15orf29|79768|chromosome 15 open reading frame 29##BC111000|C15orf29|79768|chromosome 15 open reading frame 29##AK297904|C15orf29|79768|chromosome 15 open reading frame 29##BC037234|C15orf29|79768|chromosome 15 open reading frame 29##AL833631|C15orf29|79768|chromosome 15 open reading frame 29##AK293695|C15orf29|79768|chromosome 15 open reading frame 29##AK311338|C15orf29|79768|chromosome 15 open reading frame 29##NM_024713|C15orf29|79768|chromosome 15 open reading frame 29##AK290524|TMEM85|51234|transmembrane protein 85##AK075227|TMEM85|51234|transmembrane protein 85##BC016348|TMEM85|51234|transmembrane protein 85##BC002583|TMEM85|51234|transmembrane protein 85##AF151018|TMEM85|51234|transmembrane protein 85##NM_016454|TMEM85|51234|transmembrane protein 85##AY336092|TMEM85|51234|transmembrane protein 85	0.886056	CTCF.p2:3:0.886
chr2	233200077	233200218	reg1009832.p1	11.254	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-373787	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	-409114	-	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-549031	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	43236	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	71429	+	AK313163 NM_001631 BC132678 M31008 M15694	120723	+	AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal	0.991457	CTCF.p2:19:0.991
chrX	105724648	105724777	reg1010735.p1	11.254	+	BC031229 NM_001171020 NM_152423	-312415	+	TSC_hg19_v1_chrX_-_105282719 AK310778 NM_000354	-441983	-	TSC_hg19_v1_chrX_+_105066559 AK131549	-658146	+	NM_001184782 NM_018015 TSC_hg19_v1_chrX_+_105855208 BC047503 AK001040 BC070110 AK291730 BC011483 BC033709 BC054032 CU687040 CU689708	130522	+	BC036901 NM_024539 AK126553	212363	+	TSC_hg19_v1_chrX_+_105969932 AK074264 NM_194463 BC063404 AF394689 CU687692	245296	+	BC031229|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_001171020|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_152423|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##AK131549|NRK|203447|Nik related kinase##NM_001184782|CXorf57|55086|chromosome X open reading frame 57##NM_018015|CXorf57|55086|chromosome X open reading frame 57##BC047503|CXorf57|55086|chromosome X open reading frame 57##AK001040|CXorf57|55086|chromosome X open reading frame 57##BC070110|CXorf57|55086|chromosome X open reading frame 57##AK291730|CXorf57|55086|chromosome X open reading frame 57##BC011483|CXorf57|55086|chromosome X open reading frame 57##BC033709|CXorf57|55086|chromosome X open reading frame 57##BC054032|CXorf57|55086|chromosome X open reading frame 57##BC036901|RNF128|79589|ring finger protein 128##NM_024539|RNF128|79589|ring finger protein 128##AK126553|RNF128|79589|ring finger protein 128##AK074264|RNF128|79589|ring finger protein 128##NM_194463|RNF128|79589|ring finger protein 128##BC063404|RNF128|79589|ring finger protein 128##AF394689|RNF128|79589|ring finger protein 128	1.060282	CTCF.p2:-11:1.000
chr1	89551620	89551748	reg1009730.p1	11.253	+	AK291783 M55542 AK298032 AK303893 AB208912 BC002666 NM_002053	-20718	-	JF927951 BC140837 BC144650 BC063819 CR936758 AK001823 BC017992 AK309096 AL136680 CR936755 NM_018284	-63204	-	NM_001008661 NM_001008662 NM_001162536 NM_019610	-93042	-	M55543 AK226018 BC073163 AK057968 AK314325 BC022272 NM_004120	40057	-	AK096141 NM_207398	90038	-	AK304245 AB527149 AF288814 AK131094 AL832576 BC070055 BC017889 AK312417 BC008421 NM_052941	112887	-	AK291783|GBP1|2633|guanylate binding protein 1, interferon-inducible##M55542|GBP1|2633|guanylate binding protein 1, interferon-inducible##AK298032|GBP1|2633|guanylate binding protein 1, interferon-inducible##AK303893|GBP1|2633|guanylate binding protein 1, interferon-inducible##AB208912|GBP1|2633|guanylate binding protein 1, interferon-inducible##BC002666|GBP1|2633|guanylate binding protein 1, interferon-inducible##NM_002053|GBP1|2633|guanylate binding protein 1, interferon-inducible##JF927951|GBP3|2635|guanylate binding protein 3##BC140837|GBP3|2635|guanylate binding protein 3##BC144650|GBP3|2635|guanylate binding protein 3##BC063819|GBP3|2635|guanylate binding protein 3##CR936758|GBP3|2635|guanylate binding protein 3##AK001823|GBP3|2635|guanylate binding protein 3##BC017992|GBP3|2635|guanylate binding protein 3##AK309096|GBP3|2635|guanylate binding protein 3##AL136680|GBP3|2635|guanylate binding protein 3##CR936755|GBP3|2635|guanylate binding protein 3##NM_018284|GBP3|2635|guanylate binding protein 3##NM_001008661|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001008662|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001162536|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##NM_019610|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##M55543|GBP2|2634|guanylate binding protein 2, interferon-inducible##AK226018|GBP2|2634|guanylate binding protein 2, interferon-inducible##BC073163|GBP2|2634|guanylate binding protein 2, interferon-inducible##AK057968|GBP2|2634|guanylate binding protein 2, interferon-inducible##AK314325|GBP2|2634|guanylate binding protein 2, interferon-inducible##BC022272|GBP2|2634|guanylate binding protein 2, interferon-inducible##NM_004120|GBP2|2634|guanylate binding protein 2, interferon-inducible##AK096141|GBP7|388646|guanylate binding protein 7##NM_207398|GBP7|388646|guanylate binding protein 7##AK304245|GBP4|115361|guanylate binding protein 4##AF288814|GBP4|115361|guanylate binding protein 4##AK131094|GBP4|115361|guanylate binding protein 4##AL832576|GBP4|115361|guanylate binding protein 4##BC070055|GBP4|115361|guanylate binding protein 4##BC017889|GBP4|115361|guanylate binding protein 4##AK312417|GBP4|115361|guanylate binding protein 4##BC008421|GBP4|115361|guanylate binding protein 4##NM_052941|GBP4|115361|guanylate binding protein 4	0.988313	CTCF.p2:-17:0.988
chr14	93685578	93685714	reg1010236.p1	11.252	+	TSC_hg19_v1_chr14_+_93673628 AB590826 BC051819 BX248249	-12012	+	BC017013 TSC_hg19_v1_chr14_+_93673625	-12022	+	TSC_hg19_v1_chr14_+_93673600 BC015046 AK315492	-12050	+	TSC_hg19_v1_chr14_-_93799368 AB040958 AK001510	113719	-	TSC_hg19_v1_chr14_-_93799376 AK291422 BC141850 BX248762 NM_001002860 NM_018167 BC047071	113758	-	AK125327 NM_020818	113918	+	BC051819|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BX248249|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BC017013|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BC015046|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##AK315492|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##AB040958|BTBD7|55727|BTB (POZ) domain containing 7##AK001510|BTBD7|55727|BTB (POZ) domain containing 7##AK291422|BTBD7|55727|BTB (POZ) domain containing 7##BC141850|BTBD7|55727|BTB (POZ) domain containing 7##BX248762|BTBD7|55727|BTB (POZ) domain containing 7##NM_001002860|BTBD7|55727|BTB (POZ) domain containing 7##NM_018167|BTBD7|55727|BTB (POZ) domain containing 7##BC047071|BTBD7|55727|BTB (POZ) domain containing 7##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)	0.951666	CTCF.p2:10:0.952
chr20	61814805	61814915	reg1007521.p1	11.252	+	BC137288 BC137308 NM_080606	-176474	-	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-230735	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-230830	+	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	32663	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	52481	+	TSC_hg19_v1_chr20_-_61884664 AK308958	69873	-	BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7##AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4	0.654208	CTCF.p2:16:0.654
chr4	42373600	42373713	reg1008193.p2	11.252	+	AB126828 AB126829 NM_001159547 NM_207406	-218762	-	TSC_hg19_v1_chr4_-_42154719 AK125953 AB463533	-219000	-	TSC_hg19_v1_chr4_-_42154134 BC128592 BC128593	-219496	-	NM_001080505	26199	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	285432	-	AB528853 NM_001080476	521625	+	AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##AK125953|BEND4|389206|BEN domain containing 4##BC128592|BEND4|389206|BEN domain containing 4##BC128593|BEND4|389206|BEN domain containing 4##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1	0.988223	CTCF.p2:2:0.988
chr5	111510824	111510969	reg1009495.p1	11.252	+	TSC_hg19_v1_chr5_+_111496560 AB002437	-14327	+	AK298779 NM_001142474 NM_001142475	-198322	-	NM_001142477 TSC_hg19_v1_chr5_-_111093886 NM_001142476	-417043	-	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	243977	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	532315	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	562677	+	AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13##AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli	0.993503	CTCF.p2:-18:0.994
chr2	214111533	214111672	reg1010971.p1	11.251	+	BC028936 NM_001079526	-95270	-	AK301503 AF130863 NM_016260	-96547	-	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	-708287	-	AK124960 NM_001242575	37326	-	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	37555	+	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	1164858	+	BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451##BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	0.376283	CTCF.p2:-4:0.376
chr6	138430654	138430779	reg1009860.p1	11.251	+	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	-2148	-	TSC_hg19_v1_chr6_-_138189314 AK124173	-241366	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-242179	+	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	52420	+	BC069109 NM_021635 AF189269 AF189270	108910	-	TSC_hg19_v1_chr6_+_138725355 NM_014320 AF117616 BC016806 BC016807 AK057928 AY427823	294669	+	DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_014320|HEBP2|23593|heme binding protein 2##AF117616|HEBP2|23593|heme binding protein 2##BC016806|HEBP2|23593|heme binding protein 2##BC016807|HEBP2|23593|heme binding protein 2##AK057928|HEBP2|23593|heme binding protein 2##AY427823|HEBP2|23593|heme binding protein 2	0.998212	CTCF.p2:7:0.998
chr15	82635520	82635631	reg1010472.p1	11.250	+	TSC_hg19_v1_chr15_+_82555158 AL833762 NM_001008226 BC144647 AK304339	-80422	+	TSC_hg19_v1_chr15_-_82555076 NM_001040610 NM_024580	-80486	-	BC014628 TSC_hg19_v1_chr15_-_82555043 AK300348 AK056656 BX538332	-80544	-	NM_001164465	6130	-	TSC_hg19_v1_chr15_+_82647308 BC066934	11756	+	NM_198181 CR936812	86641	+	AL833762|FAM154B|283726|family with sequence similarity 154, member B##NM_001008226|FAM154B|283726|family with sequence similarity 154, member B##AK304339|FAM154B|283726|family with sequence similarity 154, member B##NM_001040610|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_024580|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BC014628|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK300348|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK056656|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BX538332|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9	0.799612	CTCF.p2:1:0.800
chr1	89920836	89920956	reg1008961.p1	11.250	+	NM_198460 AK131356	-91452	+	AY358953 AK090479 AF328727 AF430643 TSC_hg19_v1_chr1_-_89738544 BC031639 AF430642 NM_001134486 NM_052942	-182382	-	AK304245 AB527149 AF288814 AK131094 AL832576 BC070055 BC017889 AK312417 BC008421 NM_052941	-256325	-	NM_001134476 TSC_hg19_v1_chr1_+_89990414	69519	+	TSC_hg19_v1_chr1_+_89990454 BC060782 BC030607	69580	+	AF385436 NM_015350	103375	+	NM_198460|GBP6|163351|guanylate binding protein family, member 6##AK131356|GBP6|163351|guanylate binding protein family, member 6##AY358953|GBP5|115362|guanylate binding protein 5##AK090479|GBP5|115362|guanylate binding protein 5##AF328727|GBP5|115362|guanylate binding protein 5##AF430643|GBP5|115362|guanylate binding protein 5##BC031639|GBP5|115362|guanylate binding protein 5##AF430642|GBP5|115362|guanylate binding protein 5##NM_001134486|GBP5|115362|guanylate binding protein 5##NM_052942|GBP5|115362|guanylate binding protein 5##AK304245|GBP4|115361|guanylate binding protein 4##AF288814|GBP4|115361|guanylate binding protein 4##AK131094|GBP4|115361|guanylate binding protein 4##AL832576|GBP4|115361|guanylate binding protein 4##BC070055|GBP4|115361|guanylate binding protein 4##BC017889|GBP4|115361|guanylate binding protein 4##AK312417|GBP4|115361|guanylate binding protein 4##BC008421|GBP4|115361|guanylate binding protein 4##NM_052941|GBP4|115361|guanylate binding protein 4##NM_001134476|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC060782|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC030607|LRRC8B|23507|leucine rich repeat containing 8 family, member B##AF385436|LRRC8B|23507|leucine rich repeat containing 8 family, member B##NM_015350|LRRC8B|23507|leucine rich repeat containing 8 family, member B	0.949812	CTCF.p2:22:0.950
chrX	149131214	149131349	reg1010848.p1	11.250	+	L43575 TSC_hg19_v1_chrX_-_149106661 U66042 NM_001013845	-24599	-	AK313943 NM_001166400 NM_001166401 NM_005364 BC002455 BC012744	-121311	+	AK292272 AK313321 NM_001080790 BC002351 NM_005365	-267686	+	TSC_hg19_v1_chrX_+_149529838 AK302612	398552	+	TSC_hg19_v1_chrX_+_149531583 NM_001177465 AK294478	400281	+	NM_001177466 NM_005491 U46023 BC136324 AB527434 AK315217	482501	+	L43575|CXorf40B|541578|chromosome X open reading frame 40B##U66042|CXorf40B|541578|chromosome X open reading frame 40B##NM_001013845|CXorf40B|541578|chromosome X open reading frame 40B##AK313943|MAGEA8|4107|melanoma antigen family A, 8##NM_001166400|MAGEA8|4107|melanoma antigen family A, 8##NM_001166401|MAGEA8|4107|melanoma antigen family A, 8##NM_005364|MAGEA8|4107|melanoma antigen family A, 8##BC002455|MAGEA8|4107|melanoma antigen family A, 8##BC012744|MAGEA8|4107|melanoma antigen family A, 8##AK292272|MAGEA9|4108|melanoma antigen family A, 9##AK313321|MAGEA9|4108|melanoma antigen family A, 9##NM_001080790|MAGEA9B|728269|melanoma antigen family A, 9B##BC002351|MAGEA9|4108|melanoma antigen family A, 9##NM_005365|MAGEA9|4108|melanoma antigen family A, 9##AK302612|MAMLD1|10046|mastermind-like domain containing 1##NM_001177465|MAMLD1|10046|mastermind-like domain containing 1##AK294478|MAMLD1|10046|mastermind-like domain containing 1##NM_001177466|MAMLD1|10046|mastermind-like domain containing 1##NM_005491|MAMLD1|10046|mastermind-like domain containing 1##U46023|MAMLD1|10046|mastermind-like domain containing 1##BC136324|MAMLD1|10046|mastermind-like domain containing 1##AK315217|MAMLD1|10046|mastermind-like domain containing 1	0.962762	CTCF.p2:-15:0.963
chr3	143670363	143670481	reg1008204.p2	11.249	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	-103155	-	BC067737 TSC_hg19_v1_chr3_+_142895211	-775251	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-831771	+	NM_173552 AK315082	20230	+	TSC_hg19_v1_chr3_+_143690915 BC037293	20568	+	NM_001134470 AK294020	21795	+	AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58##NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58##AK294020|C3orf58|205428|chromosome 3 open reading frame 58	0.936281	CTCF.p2:-7:0.936
chr1	161261434	161261579	reg1008619.p1	11.248	+	BC028905 NM_001102566 TSC_hg19_v1_chr1_+_161228534 BC067884 BC147003 BC147004	-32941	+	AK310773 AY572806 AY572807 AY572808 AY572809 AY572810 AY572811 AY572812 AY572813 AY572814 AY572815 AY572816 AY572817 AY572818 AY572819 AY572820 AY572821 AY572822 AY572823 AY572824 AY572825 AY572826 AY572827 BC121120 BC121121 BC030972 BC069626 BC069651 AK316208 AK303757 NM_001077469 NM_001077470 NM_001077471 NM_001077472 NM_001077473 NM_001077474 NM_001077475 NM_001077476 NM_001077477 NM_001077478 NM_001077479 NM_001077480 NM_001077481 NM_001077482 NM_005122 AK303796	-53550	-	NM_032174 TSC_hg19_v1_chr1_+_161195849 AK022832 AK027704 AK297848 BX537951 AK297831	-65649	+	BT006765 DQ895885 EU176378 S66705 D10537 BC006491 AK313555 TSC_hg19_v1_chr1_-_161279760 NM_000530	18236	-	NM_001035511 NM_001035512 NM_001035513 NM_003001 TSC_hg19_v1_chr1_+_161284170 AK131051 AK293687 AK294305 BC020808 BC066329 U57877 AB211234 AB211235 AB201252 AB212048 BC012735 BC033626 D49737	22673	+	NM_001013625	76157	-	BC028905|PCP4L1|654790|Purkinje cell protein 4 like 1##NM_001102566|PCP4L1|654790|Purkinje cell protein 4 like 1##BC067884|PCP4L1|654790|Purkinje cell protein 4 like 1##BC147003|PCP4L1|654790|Purkinje cell protein 4 like 1##BC147004|PCP4L1|654790|Purkinje cell protein 4 like 1##AK310773|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572806|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572807|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572808|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572809|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572810|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572811|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572812|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572813|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572814|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572815|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572816|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572817|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572818|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572819|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572820|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572821|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572822|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572823|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572824|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572825|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572826|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572827|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC121120|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC121121|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC030972|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC069626|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC069651|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK316208|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK303757|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077469|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077470|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077471|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077472|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077473|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077474|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077475|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077476|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077477|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077478|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077479|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077480|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077481|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077482|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_005122|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK303796|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_032174|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK022832|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK027704|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK297848|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##BX537951|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK297831|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##BT006765|MPZ|4359|myelin protein zero##DQ895885|MPZ|4359|myelin protein zero##EU176378|MPZ|4359|myelin protein zero##S66705|MPZ|4359|myelin protein zero##D10537|MPZ|4359|myelin protein zero##BC006491|MPZ|4359|myelin protein zero##AK313555|MPZ|4359|myelin protein zero##NM_000530|MPZ|4359|myelin protein zero##NM_001035511|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001035512|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001035513|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_003001|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK131051|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK293687|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK294305|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC020808|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC066329|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##U57877|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB211234|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB211235|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB201252|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB212048|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC012735|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC033626|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##D49737|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001013625|C1orf192|257177|chromosome 1 open reading frame 192	0.662178	CTCF.p2:15:0.662
chr1	58628755	58628899	reg1010774.p1	11.248	+	TSC_hg19_v1_chr1_-_57888785 AK313144	-739999	-	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	-1197111	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	-1308319	+	TSC_hg19_v1_chr1_-_58716179 CR933698 AB210012	87355	-	TSC_hg19_v1_chr1_-_58716210 AK095513 NM_021080	87382	-	TSC_hg19_v1_chr1_-_59012387 AF263547 NM_145243 AB048348 BC012915 AK308847	383596	-	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##CR933698|DAB1|1600|disabled homolog 1 (Drosophila)##AB210012|DAB1|1600|disabled homolog 1 (Drosophila)##AK095513|DAB1|1600|disabled homolog 1 (Drosophila)##NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)##NM_145243|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AB048348|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BC012915|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AK308847|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)	0.995679	CTCF.p2:9:0.996
chr2	210937782	210937881	reg1008621.p1	11.248	+	BC016764 TSC_hg19_v1_chr2_+_210867366 AK093658 AX748246 AK291035 AK303184 AL833120 AK096199 AK308741 BC072401 BC005148 NM_199229 AB528699 EU831915 EU832009	-70461	+	TSC_hg19_v1_chr2_+_210867347 BC063135 AK056028 NM_006916	-70495	+	TSC_hg19_v1_chr2_+_210636732 BC136690 BC136693	-301095	+	TSC_hg19_v1_chr2_-_211018294 AK074441 BC070141	80510	-	AK124963 TSC_hg19_v1_chr2_-_211035462	97589	-	TSC_hg19_v1_chr2_-_211036099 BC126155 BC143914 BC032837 NM_152519 AK308432	98219	-	BC016764|RPE|6120|ribulose-5-phosphate-3-epimerase##AK093658|RPE|6120|ribulose-5-phosphate-3-epimerase##AK291035|RPE|6120|ribulose-5-phosphate-3-epimerase##AK303184|RPE|6120|ribulose-5-phosphate-3-epimerase##AL833120|RPE|6120|ribulose-5-phosphate-3-epimerase##AK096199|RPE|6120|ribulose-5-phosphate-3-epimerase##AK308741|RPE|6120|ribulose-5-phosphate-3-epimerase##BC072401|RPE|6120|ribulose-5-phosphate-3-epimerase##BC005148|RPE|6120|ribulose-5-phosphate-3-epimerase##NM_199229|RPE|6120|ribulose-5-phosphate-3-epimerase##EU831915|RPE|6120|ribulose-5-phosphate-3-epimerase##EU832009|RPE|6120|ribulose-5-phosphate-3-epimerase##BC063135|RPE|6120|ribulose-5-phosphate-3-epimerase##AK056028|RPE|6120|ribulose-5-phosphate-3-epimerase##NM_006916|RPE|6120|ribulose-5-phosphate-3-epimerase##BC136690|UNC80|285175|unc-80 homolog (C. elegans)##BC136693|UNC80|285175|unc-80 homolog (C. elegans)##AK074441|C2orf67|151050|chromosome 2 open reading frame 67##BC070141|C2orf67|151050|chromosome 2 open reading frame 67##AK124963|C2orf67|151050|chromosome 2 open reading frame 67##BC126155|C2orf67|151050|chromosome 2 open reading frame 67##BC143914|C2orf67|151050|chromosome 2 open reading frame 67##BC032837|C2orf67|151050|chromosome 2 open reading frame 67##NM_152519|C2orf67|151050|chromosome 2 open reading frame 67##AK308432|C2orf67|151050|chromosome 2 open reading frame 67	0.076383	
chr6	109848341	109848484	reg1010577.p1	11.248	+	TSC_hg19_v1_chr6_-_109804443 AB007901 NM_001164313 NM_014797	-43953	-	TSC_hg19_v1_chr6_-_109804420 AK309697 BC036731	-44040	-	TSC_hg19_v1_chr6_-_109777182 AB048948 NM_001159291 NM_022765	-71232	-	TSC_hg19_v1_chr6_-_110012389 AK092103 AX747355 AK315561 AK055538 AL832162 NM_001145128 NM_145025 BC022031	163971	-	NM_014845 TSC_hg19_v1_chr6_+_110012488 BC041338	164044	+	TSC_hg19_v1_chr6_+_110012514 AK291671 AK293422 D87464	164096	+	AB007901|ZBTB24|9841|zinc finger and BTB domain containing 24##NM_001164313|ZBTB24|9841|zinc finger and BTB domain containing 24##NM_014797|ZBTB24|9841|zinc finger and BTB domain containing 24##AK309697|ZBTB24|9841|zinc finger and BTB domain containing 24##BC036731|ZBTB24|9841|zinc finger and BTB domain containing 24##AB048948|MICAL1|64780|microtubule associated monoxygenase, calponin and LIM domain containing 1##NM_001159291|MICAL1|64780|microtubule associated monoxygenase, calponin and LIM domain containing 1##NM_022765|MICAL1|64780|microtubule associated monoxygenase, calponin and LIM domain containing 1##AK315561|AKD1|221264|adenylate kinase domain containing 1##AK055538|AKD1|221264|adenylate kinase domain containing 1##AL832162|AKD1|221264|adenylate kinase domain containing 1##NM_001145128|AKD1|221264|adenylate kinase domain containing 1##NM_145025|AKD1|221264|adenylate kinase domain containing 1##BC022031|AKD1|221264|adenylate kinase domain containing 1##NM_014845|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##BC041338|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK291671|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK293422|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##D87464|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)	0.974428	CTCF.p2:-14:0.974
chr14	35141917	35142015	reg1007290.p2	11.247	+	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	-42611	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	-133081	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	-210479	-	BC011444 AK314157 NM_021914 AF134802	41022	-	TSC_hg19_v1_chr14_-_35183800 NM_001243645 AF134803 BC022364 BC022876 BC025683 NM_138638	41909	-	AB593178 TSC_hg19_v1_chr14_+_35343416 BC039097	201510	+	BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC011444|CFL2|1073|cofilin 2 (muscle)##AK314157|CFL2|1073|cofilin 2 (muscle)##NM_021914|CFL2|1073|cofilin 2 (muscle)##AF134802|CFL2|1073|cofilin 2 (muscle)##NM_001243645|CFL2|1073|cofilin 2 (muscle)##AF134803|CFL2|1073|cofilin 2 (muscle)##BC022364|CFL2|1073|cofilin 2 (muscle)##BC022876|CFL2|1073|cofilin 2 (muscle)##BC025683|CFL2|1073|cofilin 2 (muscle)##NM_138638|CFL2|1073|cofilin 2 (muscle)	0.99953	CTCF.p2:0:1.000
chr17	15160797	15160918	reg1009144.p1	11.247	+	TSC_hg19_v1_chr17_+_14204397 AK023723 BC063301 AF105377 NM_006041 BC069664 BC069725	-956412	+	NM_001007530 BC146859 BC071823	-1020694	-	TSC_hg19_v1_chr17_+_13972841 BC000060 BC006394 U09466 AK294213 AK295925 BT006985 CU674016 DQ893604 DQ895073	-1187976	+	CR541931 CR541953 M94048 NM_153322 S61788 TSC_hg19_v1_chr17_-_15164113	3223	-	AK300690 L03203 TSC_hg19_v1_chr17_-_15165834	4962	-	AK290640 TSC_hg19_v1_chr17_-_15165870 BC019040	5008	-	AK023723|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC063301|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##AF105377|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##NM_006041|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC069664|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC069725|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##NM_001007530|CDRT15|146822|CMT1A duplicated region transcript 15##BC146859|CDRT15|146822|CMT1A duplicated region transcript 15##BC071823|CDRT15|146822|CMT1A duplicated region transcript 15##BC000060|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##BC006394|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##U09466|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK294213|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK295925|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##BT006985|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##DQ893604|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##DQ895073|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##CR541931|PMP22|5376|peripheral myelin protein 22##CR541953|PMP22|5376|peripheral myelin protein 22##M94048|PMP22|5376|peripheral myelin protein 22##NM_153322|PMP22|5376|peripheral myelin protein 22##S61788|PMP22|5376|peripheral myelin protein 22##AK300690|PMP22|5376|peripheral myelin protein 22##L03203|PMP22|5376|peripheral myelin protein 22##AK290640|PMP22|5376|peripheral myelin protein 22##BC019040|PMP22|5376|peripheral myelin protein 22	0.99144	CTCF.p2:-15:0.991
chr3	55468935	55469061	reg1008449.p2	11.247	+	BC074741 AF225421 NM_020678	-506982	-	TSC_hg19_v1_chr3_+_54156691 AF516696 NM_018398	-1312307	+	BC137502 BC137505 TSC_hg19_v1_chr3_+_54156614	-1312399	+	TSC_hg19_v1_chr3_-_55514935 CU687936 AB590996 BC074783	45946	-	TSC_hg19_v1_chr3_-_55515377 L20861	46377	-	AK290869 TSC_hg19_v1_chr3_-_55515412	46410	-	BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF516696|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##NM_018398|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137502|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137505|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A##L20861|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A	0.988138	CTCF.p2:-6:0.988
chr5	43306178	43306312	reg1011109.p1	11.247	+	BC036422 NM_153361	-113919	+	AK057343 NM_003432 TSC_hg19_v1_chr5_+_43121669 AK310735 BC017923	-184561	+	TSC_hg19_v1_chr5_+_43121609 AK299315 AK307977	-184631	+	BC000297 BC082234 M15802 X66435 TSC_hg19_v1_chr5_-_43313515 AK095492 AK315593	7286	-	TSC_hg19_v1_chr5_-_43313581 NM_001098272 NM_002130	7351	-	TSC_hg19_v1_chr5_-_43397231 AK307307	90981	-	BC036422|NIM1|167359|serine/threonine-protein kinase NIM1##NM_153361|NIM1|167359|serine/threonine-protein kinase NIM1##AK057343|ZNF131|7690|zinc finger protein 131##NM_003432|ZNF131|7690|zinc finger protein 131##AK310735|ZNF131|7690|zinc finger protein 131##BC017923|ZNF131|7690|zinc finger protein 131##AK299315|ZNF131|7690|zinc finger protein 131##AK307977|ZNF131|7690|zinc finger protein 131##BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##M15802|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK307307|CCL28|56477|chemokine (C-C motif) ligand 28	0.817428	CTCF.p2:2:0.817
chr12	93958139	93958270	reg1010711.p1	11.246	+	NM_014050 NM_172177 TSC_hg19_v1_chr12_+_93861292 AF135160 AF078860 AL136659 AK000285 AF151038 CR749344	-96925	+	TSC_hg19_v1_chr12_-_93836008 NM_003348	-122180	-	TSC_hg19_v1_chr12_-_93835724 BC000396	-122466	-	NM_003877	5393	+	TSC_hg19_v1_chr12_-_93964654 AK123812	6459	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	6616	+	NM_014050|MRPL42|28977|mitochondrial ribosomal protein L42##NM_172177|MRPL42|28977|mitochondrial ribosomal protein L42##AF135160|MRPL42|28977|mitochondrial ribosomal protein L42##AF078860|MRPL42|28977|mitochondrial ribosomal protein L42##AL136659|MRPL42|28977|mitochondrial ribosomal protein L42##AK000285|MRPL42|28977|mitochondrial ribosomal protein L42##AF151038|MRPL42|28977|mitochondrial ribosomal protein L42##CR749344|MRPL42|28977|mitochondrial ribosomal protein L42##NM_003348|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC000396|UBE2N|7334|ubiquitin-conjugating enzyme E2N##NM_003877|SOCS2|8835|suppressor of cytokine signaling 2##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2	0.0	
chr1	793416	793542	reg1010578.p1	11.246	+	TSC_hg19_v1_chr1_+_763052 AK311121 AK311732 AK026873 BC102012 BC102023 BC107481	-30409	+	BC042880 TSC_hg19_v1_chr1_+_763038	-30466	+	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	-30584	-	TSC_hg19_v1_chr1_+_861084 NM_152486	67622	+	AB463150 AM393843 CU678496 TSC_hg19_v1_chr1_-_894632 AL050019 AK024284 AK225239 BC009786	101149	-	TSC_hg19_v1_chr1_-_894646 AK315080	101166	-	AK311732|LOC643837|643837|uncharacterized LOC643837##AK026873|LOC643837|643837|uncharacterized LOC643837##BC102012|LOC643837|643837|uncharacterized LOC643837##BC102023|LOC643837|643837|uncharacterized LOC643837##BC107481|LOC643837|643837|uncharacterized LOC643837##BC042880|LOC643837|643837|uncharacterized LOC643837##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115##NM_152486|SAMD11|148398|sterile alpha motif domain containing 11##AM393843|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AL050019|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK024284|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK225239|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##BC009786|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK315080|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)	0.689027	CTCF.p2:-5:0.614
chr13	21754978	21755075	reg1008542.p2	11.245	+	TSC_hg19_v1_chr13_+_21750834 BC068492 BC023616 BC000002	-4226	+	CU690596 TSC_hg19_v1_chr13_-_21750699 AF361358 AK090584 AK314864 AX746521 BC013418 AK307976 BC048988 NM_001166017 NM_145061	-4338	-	NM_024026	-4655	+	TSC_hg19_v1_chr13_+_21872311 AK093279	117257	+	CU686599 TSC_hg19_v1_chr13_-_22033417 BC110517 AK295804 BC050367 AK299354	278364	-	TSC_hg19_v1_chr13_-_22033486 AX721051	278456	-	BC068492|MRP63|78988|mitochondrial ribosomal protein 63##BC023616|MRP63|78988|mitochondrial ribosomal protein 63##BC000002|MRP63|78988|mitochondrial ribosomal protein 63##AF361358|SKA3|221150|spindle and kinetochore associated complex subunit 3##AK090584|SKA3|221150|spindle and kinetochore associated complex subunit 3##AK314864|SKA3|221150|spindle and kinetochore associated complex subunit 3##BC013418|SKA3|221150|spindle and kinetochore associated complex subunit 3##AK307976|SKA3|221150|spindle and kinetochore associated complex subunit 3##BC048988|SKA3|221150|spindle and kinetochore associated complex subunit 3##NM_001166017|SKA3|221150|spindle and kinetochore associated complex subunit 3##NM_145061|SKA3|221150|spindle and kinetochore associated complex subunit 3##NM_024026|MRP63|78988|mitochondrial ribosomal protein 63##AK093279|MIPEPP3|650794|mitochondrial intermediate peptidase pseudogene 3##BC110517|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK295804|ZDHHC20|253832|zinc finger, DHHC-type containing 20##BC050367|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK299354|ZDHHC20|253832|zinc finger, DHHC-type containing 20	0.175451	
chr20	58071095	58071208	reg1008517.p2	11.245	+	TSC_hg19_v1_chr20_+_57875665 J05081 X52001 AB590897 CU679163 BT007085 DQ096281	-195394	+	BC008876 TSC_hg19_v1_chr20_+_57875490 BC053866 NM_000114 NM_207032 NM_207033 NM_207034	-195662	+	NM_178457	-305077	+	AK098788 NM_001199505	81412	+	BC108303 AJ311122 NM_080672 TSC_hg19_v1_chr20_+_58179660 BC117362 BC117364	108503	+	AJ617581 NM_001199506 AK316047	180565	+	J05081|EDN3|1908|endothelin 3##X52001|EDN3|1908|endothelin 3##BT007085|EDN3|1908|endothelin 3##DQ096281|EDN3|1908|endothelin 3##BC008876|EDN3|1908|endothelin 3##BC053866|EDN3|1908|endothelin 3##NM_000114|EDN3|1908|endothelin 3##NM_207032|EDN3|1908|endothelin 3##NM_207033|EDN3|1908|endothelin 3##NM_207034|EDN3|1908|endothelin 3##NM_178457|ZNF831|128611|zinc finger protein 831##AK098788|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199505|PHACTR3|116154|phosphatase and actin regulator 3##BC108303|PHACTR3|116154|phosphatase and actin regulator 3##AJ311122|PHACTR3|116154|phosphatase and actin regulator 3##NM_080672|PHACTR3|116154|phosphatase and actin regulator 3##BC117362|PHACTR3|116154|phosphatase and actin regulator 3##BC117364|PHACTR3|116154|phosphatase and actin regulator 3##AJ617581|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199506|PHACTR3|116154|phosphatase and actin regulator 3##AK316047|PHACTR3|116154|phosphatase and actin regulator 3	1.022393	CTCF.p2:-4:0.996
chr1	235580540	235580651	reg1008250.p1	11.244	+	TSC_hg19_v1_chr1_+_235530768 AK093397 AK292287 BC008654	-49823	+	NM_001079515 NM_003193 TSC_hg19_v1_chr1_+_235530744 AK296185 AK298050	-49852	+	AK309831 TSC_hg19_v1_chr1_+_235492306	-88300	+	TSC_hg19_v1_chr1_-_235667473 AK091497	86914	-	TSC_hg19_v1_chr1_-_235667723 BC016974 AK130297	87138	-	BC029564 NM_152490 TSC_hg19_v1_chr1_-_235667782	87186	-	AK093397|TBCE|6905|tubulin folding cofactor E##AK292287|TBCE|6905|tubulin folding cofactor E##BC008654|TBCE|6905|tubulin folding cofactor E##NM_001079515|TBCE|6905|tubulin folding cofactor E##NM_003193|TBCE|6905|tubulin folding cofactor E##AK296185|TBCE|6905|tubulin folding cofactor E##AK298050|TBCE|6905|tubulin folding cofactor E##AK091497|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##BC016974|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##AK130297|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##BC029564|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_152490|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2	0.051988	
chr3	105237788	105237936	reg1010164.p1	11.243	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-152040	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	-152282	+	AY090780 NM_175056 BC143817	-3083995	+	CR749655 TSC_hg19_v1_chr3_-_105421064	183192	-	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	349945	-	TSC_hg19_v1_chr3_-_106959482 BC036229	1721617	-	AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.998434	CTCF.p2:8:0.998
chr3	58291832	58291961	reg1008584.p1	11.242	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	-68366	+	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	-68613	+	NM_004944	-91499	-	TSC_hg19_v1_chr3_+_58291985 NM_001098783 NM_007042	74	+	TSC_hg19_v1_chr3_+_58292000 AF001175	104	+	TSC_hg19_v1_chr3_+_58292022 BC012017 BC002441 BC007342	121	+	AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_001098783|RPP14|11102|ribonuclease P/MRP 14kDa subunit##NM_007042|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AF001175|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC012017|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC002441|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC007342|RPP14|11102|ribonuclease P/MRP 14kDa subunit	0.998698	CTCF.p2:-5:0.999
chr1	14440462	14440600	reg1010364.p1	11.241	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-364590	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-364608	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-364646	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	484663	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	810188	+	AY505121 NM_001018001	815764	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.589526	CTCF.p2:-10:0.590
chr16	9742088	9742207	reg1008278.p1	11.241	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-556544	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-556607	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-684852	-	BC143273 U09002 NM_001134408	533686	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	534041	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	534530	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.264405	CTCF.p2:-2:0.264
chr17	7426520	7426638	reg1007468.p1	11.241	+	TSC_hg19_v1_chr17_+_7388113 CU688278	-38463	+	TSC_hg19_v1_chr17_+_7387773 BC137231 BC067295	-38724	+	AK293777 TSC_hg19_v1_chr17_+_7387688 NM_000937 X63564	-38887	+	BC019047 NM_003809 NM_172089 BC071837 AF055872 AY358870 AY081051 BC104420 AF030099	25834	+	TSC_hg19_v1_chr17_+_7461620 NM_001198622 NM_001198623 NM_001198624 NM_003808 NM_172087 NM_172088	35037	+	AK225556 AK314518 AK301221 AF046888 AF114011 AY081050 AF114013 AF114012 AF184972 AY358880 BC008042 TSC_hg19_v1_chr17_+_7462318 DQ149579 EF211088 EU831984 EU832077 AF136294 BT019561 BT019562 CR542040 CR542073	35631	+	BC137231|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##BC067295|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##AK293777|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##NM_000937|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##X63564|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##BC019047|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_003809|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_172089|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough##BC071837|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AF055872|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AY358870|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AY081051|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough##BC104420|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AF030099|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_001198622|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198623|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198624|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_003808|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_172087|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_172088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK225556|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK314518|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK301221|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF046888|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114011|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AY081050|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114013|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114012|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF184972|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AY358880|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BC008042|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##DQ149579|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EF211088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EU831984|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EU832077|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF136294|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BT019561|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BT019562|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##CR542040|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##CR542073|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	0.010279	
chr12	108587738	108587877	reg1010436.p1	11.240	+	BC110330 AB018332 NM_014653	-64320	+	AY238895 NM_203436	-419646	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-432806	-	NM_001142345	126631	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	145277	-	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	321275	+	BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing	0.935032	CTCF.p2:3:0.935
chr3	97758574	97758714	reg1003116.p2	11.240	+	CR749263 NM_001105580	-4497	-	TSC_hg19_v1_chr3_-_97691261 NM_001042533 NM_032778 AK027299 DQ453796 AB083192 NM_153182	-67367	-	TSC_hg19_v1_chr3_+_97540854 AK296966	-217774	+	AB528856 NM_054106	47372	+	AB528772 NM_001005338	92896	+	BC136984 NM_001005514	109555	+	CR749263|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3##NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3##NM_001042533|MINA|84864|MYC induced nuclear antigen##NM_032778|MINA|84864|MYC induced nuclear antigen##AK027299|MINA|84864|MYC induced nuclear antigen##DQ453796|MINA|84864|MYC induced nuclear antigen##AB083192|MINA|84864|MYC induced nuclear antigen##NM_153182|MINA|84864|MYC induced nuclear antigen##AK296966|CRYBG3|131544|beta-gamma crystallin domain containing 3##NM_054106|OR5AC2|81050|olfactory receptor, family 5, subfamily AC, member 2##NM_001005338|OR5H1|26341|olfactory receptor, family 5, subfamily H, member 1##BC136984|OR5H14|403273|olfactory receptor, family 5, subfamily H, member 14##NM_001005514|OR5H14|403273|olfactory receptor, family 5, subfamily H, member 14	0.98846	CTCF.p2:-11:0.988
chr14	88082518	88082652	reg1009774.p1	11.239	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-2083000	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-2086044	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-2086112	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	376878	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	376974	-	NM_001201402	377423	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	0.94224	CTCF.p2:5:0.942
chr17	3551206	3551331	reg1010632.p1	11.239	+	TSC_hg19_v1_chr17_+_3540053 AJ222967 AK296178 AK297525 AK292019 AK309044 AK309651	-11218	+	NM_001031681 NM_004937 BC032850	-11502	+	TSC_hg19_v1_chr17_-_3539545 AB529118 CU676548 DQ891646 DQ894835 AK055609 AL832420 AK312428 AK298360 BC020543 AF163573 NM_013276	-11769	-	AB590842 CU692828 TSC_hg19_v1_chr17_-_3571873 AF277318 BC035653 U90913 AF234997 AK001327 AK315408 BC023980	20580	-	TSC_hg19_v1_chr17_-_3571905 AF028823 NM_001204698 NM_014604	20670	-	NM_001014764 NM_031298 TSC_hg19_v1_chr17_+_3572105 BC001409	20834	+	AJ222967|CTNS|1497|cystinosin, lysosomal cystine transporter##AK296178|CTNS|1497|cystinosin, lysosomal cystine transporter##AK297525|CTNS|1497|cystinosin, lysosomal cystine transporter##AK292019|CTNS|1497|cystinosin, lysosomal cystine transporter##AK309044|CTNS|1497|cystinosin, lysosomal cystine transporter##AK309651|CTNS|1497|cystinosin, lysosomal cystine transporter##NM_001031681|CTNS|1497|cystinosin, lysosomal cystine transporter##NM_004937|CTNS|1497|cystinosin, lysosomal cystine transporter##BC032850|CTNS|1497|cystinosin, lysosomal cystine transporter##DQ891646|SHPK|23729|sedoheptulokinase##DQ894835|SHPK|23729|sedoheptulokinase##AK055609|SHPK|23729|sedoheptulokinase##AL832420|SHPK|23729|sedoheptulokinase##AK312428|SHPK|23729|sedoheptulokinase##AK298360|SHPK|23729|sedoheptulokinase##BC020543|SHPK|23729|sedoheptulokinase##AF163573|SHPK|23729|sedoheptulokinase##NM_013276|SHPK|23729|sedoheptulokinase##AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##AF028823|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##NM_001204698|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##NM_014604|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##NM_001014764|TMEM93|83460|transmembrane protein 93##NM_031298|TMEM93|83460|transmembrane protein 93##BC001409|TMEM93|83460|transmembrane protein 93	0.999161	CTCF.p2:20:0.999
chr9	100473033	100473152	reg1007435.p1	11.238	+	TSC_hg19_v1_chr9_-_100459623 BC014965 NM_000380	-13426	-	TSC_hg19_v1_chr9_-_100459597 AB590398 BT019518 DQ893624 DQ895423 D14533	-13503	-	TSC_hg19_v1_chr9_+_100396102 BC001450 AB209233 X80030 AB384886 DQ895382 EU176351	-76972	+	TSC_hg19_v1_chr9_+_100615409 NM_004473	142379	+	AB464529 TSC_hg19_v1_chr9_+_100616210	143110	+	TSC_hg19_v1_chr9_-_100684783 CU678254 DQ892983 DQ896231 AY189280 AF151053 AK309270 BC002863 AK000213 AK302701 NM_016481	211718	-	BC014965|XPA|7507|xeroderma pigmentosum, complementation group A##NM_000380|XPA|7507|xeroderma pigmentosum, complementation group A##BT019518|XPA|7507|xeroderma pigmentosum, complementation group A##DQ893624|XPA|7507|xeroderma pigmentosum, complementation group A##DQ895423|XPA|7507|xeroderma pigmentosum, complementation group A##D14533|XPA|7507|xeroderma pigmentosum, complementation group A##BC001450|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##AB209233|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##X80030|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##DQ895382|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##EU176351|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##NM_004473|FOXE1|2304|forkhead box E1 (thyroid transcription factor 2)##DQ892983|C9orf156|51531|chromosome 9 open reading frame 156##DQ896231|C9orf156|51531|chromosome 9 open reading frame 156##AY189280|C9orf156|51531|chromosome 9 open reading frame 156##AF151053|C9orf156|51531|chromosome 9 open reading frame 156##AK309270|C9orf156|51531|chromosome 9 open reading frame 156##BC002863|C9orf156|51531|chromosome 9 open reading frame 156##AK000213|C9orf156|51531|chromosome 9 open reading frame 156##AK302701|C9orf156|51531|chromosome 9 open reading frame 156##NM_016481|C9orf156|51531|chromosome 9 open reading frame 156	0.999734	CTCF.p2:-8:1.000
chr10	30530183	30530292	reg1008164.p1	11.237	+	TSC_hg19_v1_chr10_-_30348516 AK308850 NM_020848 BC071601	-181743	-	TSC_hg19_v1_chr10_-_30316350 BC047548	-213806	-	TSC_hg19_v1_chr10_-_30025865 AK307640	-504331	-	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	107996	-	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	192702	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	192884	+	AK308850|KIAA1462|57608|KIAA1462##NM_020848|KIAA1462|57608|KIAA1462##BC071601|KIAA1462|57608|KIAA1462##BC047548|KIAA1462|57608|KIAA1462##AK307640|SVIL|6840|supervillin##AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8	0.833889	CTCF.p2:9:0.834
chr3	195721378	195721490	reg1008556.p2	11.236	+	TSC_hg19_v1_chr3_-_195717156 BC071730 AK300421 AK316025 AK299148	-4303	-	NM_005781 L13738	-85518	-	AK131539 NM_001010938	-99003	-	TSC_hg19_v1_chr3_-_195808954 AB209254 X01060 BC001188	87510	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	87527	-	TSC_hg19_v1_chr3_-_195808984 M11507	87549	-	BC071730|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AK316025|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK299148|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##NM_005781|TNK2|10188|tyrosine kinase, non-receptor, 2##L13738|TNK2|10188|tyrosine kinase, non-receptor, 2##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2##AB209254|TFRC|7037|transferrin receptor (p90, CD71)##X01060|TFRC|7037|transferrin receptor (p90, CD71)##BC001188|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)	0.788607	CTCF.p2:1:0.789
chr5	178157774	178157889	reg1008608.p1	11.236	+	AK290711 BC036517 TSC_hg19_v1_chr5_-_178157661 D89928 BC047105 AK128881 AF116030 NM_005649	-163	-	TSC_hg19_v1_chr5_-_178054103 AK308674	-103708	-	TSC_hg19_v1_chr5_-_178054072 AK308879 AK309215 BC151233 AK308578	-103751	-	TSC_hg19_v1_chr5_+_178287000 BC022190 BC036466 NM_058230 AK057737 AK289667	129168	+	AK131367 NM_030613 TSC_hg19_v1_chr5_+_178322918 BC142989	165090	+	NM_001178089 NM_001178090 NM_182594 AK094763 AK292317 AX721148	210384	+	AK290711|ZNF354A|6940|zinc finger protein 354A##BC036517|ZNF354A|6940|zinc finger protein 354A##D89928|ZNF354A|6940|zinc finger protein 354A##BC047105|ZNF354A|6940|zinc finger protein 354A##AF116030|ZNF354A|6940|zinc finger protein 354A##NM_005649|ZNF354A|6940|zinc finger protein 354A##AK308674|CLK4|57396|CDC-like kinase 4##AK308879|CLK4|57396|CDC-like kinase 4##BC151233|CLK4|57396|CDC-like kinase 4##BC022190|ZNF354B|117608|zinc finger protein 354B##BC036466|ZNF354B|117608|zinc finger protein 354B##NM_058230|ZNF354B|117608|zinc finger protein 354B##AK057737|ZNF354B|117608|zinc finger protein 354B##AK289667|ZNF354B|117608|zinc finger protein 354B##AK131367|ZFP2|80108|zinc finger protein 2 homolog (mouse)##NM_030613|ZFP2|80108|zinc finger protein 2 homolog (mouse)##BC142989|ZFP2|80108|zinc finger protein 2 homolog (mouse)##NM_001178089|ZNF454|285676|zinc finger protein 454##NM_001178090|ZNF454|285676|zinc finger protein 454##NM_182594|ZNF454|285676|zinc finger protein 454##AK094763|ZNF454|285676|zinc finger protein 454##AK292317|ZNF454|285676|zinc finger protein 454	0.106965	
chr1	220863541	220863691	reg1010742.p1	11.235	+	AK098103 AK314614 AF154845 BC113869 BC114478 TSC_hg19_v1_chr1_+_220702027 AK295506 AB385474	-161634	+	TSC_hg19_v1_chr1_+_220701565 AB040910 NM_018650	-162059	+	TSC_hg19_v1_chr1_+_220701527 BC068608	-162091	+	NM_024709 TSC_hg19_v1_chr1_+_220863727 BC036067 AK091937 AK056749 AK056749 AK024208	86	+	TSC_hg19_v1_chr1_+_220921664 AL136931 BC011973 NM_017898 BC016859	58028	+	NM_022746 TSC_hg19_v1_chr1_+_220960254 AK026043 AK225416 AK094105 AK290812 BC010619	96547	+	AK098103|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK314614|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AF154845|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC113869|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC114478|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK295506|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AB040910|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##NM_018650|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC068608|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##NM_024709|C1orf115|79762|chromosome 1 open reading frame 115##BC036067|C1orf115|79762|chromosome 1 open reading frame 115##AK091937|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK024208|C1orf115|79762|chromosome 1 open reading frame 115##AL136931|MARC2|54996|mitochondrial amidoxime reducing component 2##BC011973|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_017898|MARC2|54996|mitochondrial amidoxime reducing component 2##BC016859|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_022746|MARC1|64757|mitochondrial amidoxime reducing component 1##AK026043|MARC1|64757|mitochondrial amidoxime reducing component 1##AK225416|MARC1|64757|mitochondrial amidoxime reducing component 1##AK094105|MARC1|64757|mitochondrial amidoxime reducing component 1##AK290812|MARC1|64757|mitochondrial amidoxime reducing component 1##BC010619|MARC1|64757|mitochondrial amidoxime reducing component 1	0.180552	
chr6_mann_hap4	2681234	2681341	reg1009979.p1	11.235	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.012206	CTCF.p2:14:1.000
chr19	49092269	49092387	reg1008589.p1	11.234	+	NM_004605	-13336	+	TSC_hg19_v1_chr19_+_49055432 NM_177973 U92315 BC034694 CU689942	-36864	+	AB067470 NM_001080434	-75897	-	AF353721 NM_133498 AY358387 BC047334	17681	+	BC111970 BC111972 NM_017708 AK000207	24427	-	TSC_hg19_v1_chr19_-_49122434 L11566 BC009708 BC051837 AK091257 AX746879 AK026558 AK293386 BC021743 D28461 NM_000979	30105	-	NM_004605|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##NM_177973|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##U92315|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##BC034694|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##AB067470|LMTK3|114783|lemur tyrosine kinase 3##NM_001080434|LMTK3|114783|lemur tyrosine kinase 3##AF353721|SPACA4|171169|sperm acrosome associated 4##NM_133498|SPACA4|171169|sperm acrosome associated 4##AY358387|SPACA4|171169|sperm acrosome associated 4##BC047334|SPACA4|171169|sperm acrosome associated 4##BC111970|FAM83E|54854|family with sequence similarity 83, member E##BC111972|FAM83E|54854|family with sequence similarity 83, member E##NM_017708|FAM83E|54854|family with sequence similarity 83, member E##AK000207|FAM83E|54854|family with sequence similarity 83, member E##L11566|RPL18|6141|ribosomal protein L18##BC009708|RPL18|6141|ribosomal protein L18##AK026558|RPL18|6141|ribosomal protein L18##AK293386|RPL18|6141|ribosomal protein L18##BC021743|RPL18|6141|ribosomal protein L18##D28461|RPL18|6141|ribosomal protein L18##NM_000979|RPL18|6141|ribosomal protein L18	0.997645	CTCF.p2:-2:0.998
chr4	47034772	47034886	reg1009120.p1	11.234	+	NM_000812 AK296023	-1482	+	AK090780 NM_000809	-38406	-	CU690038 DQ891679 DQ894864 EU176605 U30461 NM_001204266 NM_001204267 BC035055	-39333	-	TSC_hg19_v1_chr4_-_47465683 AY542163 BC015145 NM_017845 AK000509 BC019826 AF182421	430850	-	TSC_hg19_v1_chr4_-_47465720 BC008371	430899	-	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	452501	+	NM_000812|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1##AK296023|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1##AK090780|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_000809|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##AY542163|COMMD8|54951|COMM domain containing 8##BC015145|COMMD8|54951|COMM domain containing 8##NM_017845|COMMD8|54951|COMM domain containing 8##AK000509|COMMD8|54951|COMM domain containing 8##BC019826|COMMD8|54951|COMM domain containing 8##AF182421|COMMD8|54951|COMM domain containing 8##BC008371|COMMD8|54951|COMM domain containing 8##BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D	0.992835	CTCF.p2:1:0.993
chr6	116608974	116609116	reg1007957.p1	11.234	+	BC039245 NM_001080976 BC043526	-7724	+	TSC_hg19_v1_chr6_-_116601123 NM_003309	-7855	-	TSC_hg19_v1_chr6_-_116601094 AL136629 BC068554 BC048969	-7952	-	TSC_hg19_v1_chr6_+_116692109 NM_013352 AF098066	83098	+	TSC_hg19_v1_chr6_-_116692863 AK298559 AK316303	83824	-	NM_001010919	173510	+	BC039245|DSE|29940|dermatan sulfate epimerase##NM_001080976|DSE|29940|dermatan sulfate epimerase##BC043526|DSE|29940|dermatan sulfate epimerase##NM_003309|TSPYL1|7259|TSPY-like 1##AL136629|TSPYL1|7259|TSPY-like 1##BC068554|TSPYL1|7259|TSPY-like 1##BC048969|TSPYL1|7259|TSPY-like 1##NM_013352|DSE|29940|dermatan sulfate epimerase##AF098066|DSE|29940|dermatan sulfate epimerase##AK298559|LOC100287467|100287467|uncharacterized LOC100287467##AK316303|LOC100287467|100287467|uncharacterized LOC100287467##NM_001010919|FAM26F|441168|family with sequence similarity 26, member F	0.505094	CTCF.p2:-5:0.505
chr6	135144179	135144312	reg1010609.p1	11.234	+	TSC_hg19_v1_chr6_+_134758857 AK055166	-385397	+	AK055077 NM_001143676	-505050	-	TSC_hg19_v1_chr6_-_134498984 FM205708 AK293383 NM_001143677	-645253	-	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	126987	-	CU674720 EU831981 EU832074 TSC_hg19_v1_chr6_-_135375948 BC040849 AJ420551 BC001465	231643	-	TSC_hg19_v1_chr6_-_135375958 AK024258 AK295545 AF161394 U87791 AJ459826 AJ459827 NM_001145158 NM_001145207 NM_006620	231749	-	AK055166|LOC154092|154092|uncharacterized LOC154092##AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)##EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)##BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)##BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)##AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)##AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)##AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)##U87791|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)	0.6751	CTCF.p2:13:0.675
chr7	131339572	131339684	reg1008844.p1	11.234	+	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	-98265	-	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-326989	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	-327022	+	TSC_hg19_v1_chr7_-_131833385 AL834504	493767	-	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	853292	-	AK123428 TSC_hg19_v1_chr7_-_132261230	921602	-	BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AL834504|PLXNA4|91584|plexin A4##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4##AK123428|PLXNA4|91584|plexin A4	0.998863	CTCF.p2:-2:0.999
chr8	90629361	90629511	reg1009785.p1	11.234	+	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	-1289690	-	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	-1743177	-	AK093121 AX747937 BC117326 BC117328 NM_173538	-2750763	+	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	140594	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	140848	+	AF061326 NM_004337	284659	+	AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF061326|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_004337|OSGIN2|734|oxidative stress induced growth inhibitor family member 2	0.274352	CTCF.p2:19:0.274
chr10	54711726	54711863	reg1010725.p1	11.233	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-180368	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-637679	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-1252447	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	1849204	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	2646980	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	3409220	-	AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor	0.372521	CTCF.p2:-20:0.373
chr1	105323243	105323373	reg1010248.p1	11.233	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-1030806	+	NM_001008221 AK292341	-1031030	+	AK292341 NM_001008221	-1084237	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	2276057	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	2359434	+	AB023193 TSC_hg19_v1_chr1_+_107683657	2360296	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.8517	CTCF.p2:-6:0.852
chr15	83011808	83011919	reg1010435.p1	11.233	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-66973	+	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	-67071	+	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	-186970	-	CR936602 NM_001164465	6315	-	NM_198181 CR936812	86878	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	197373	-	BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17	0.799612	CTCF.p2:-2:0.800
chr17_gl000205_random	17042	17223	reg1009260.p1	11.232	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.746796	CTCF.p2:-37:0.747
chr1	67614946	67615084	reg1010516.p1	11.231	+	NM_001013674	-20796	-	TSC_hg19_v1_chr1_-_67520070 AK289800 NM_015139	-94962	-	AB385301 BC093786 BC112031 AB044343 TSC_hg19_v1_chr1_-_67519828 D87449	-95239	-	AF461422 NM_144701	17153	+	NM_001559 U64198 TSC_hg19_v1_chr1_+_67773087	158066	+	AK294494 TSC_hg19_v1_chr1_+_67773565 AK316525	158548	+	NM_001013674|C1orf141|400757|chromosome 1 open reading frame 141##AK289800|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_015139|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##AF461422|IL23R|149233|interleukin 23 receptor##NM_144701|IL23R|149233|interleukin 23 receptor##NM_001559|IL12RB2|3595|interleukin 12 receptor, beta 2##U64198|IL12RB2|3595|interleukin 12 receptor, beta 2##AK294494|IL12RB2|3595|interleukin 12 receptor, beta 2##AK316525|IL12RB2|3595|interleukin 12 receptor, beta 2	0.028332	
chr19	14517106	14517215	reg1008199.p2	11.231	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	-24905	+	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	-25111	+	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	-200112	-	TSC_hg19_v1_chr19_-_14529877 AK301847	12729	-	TSC_hg19_v1_chr19_-_14530152 BC001009 BC032128 BC010455 AK293911	12980	-	TSC_hg19_v1_chr19_-_14530193 U90426 NM_005804	13014	-	AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##AK301847|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##BC001009|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##BC032128|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##BC010455|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##AK293911|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##U90426|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##NM_005804|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A	1.827334	CTCF.p2:1:0.971	CTCF.p2:42:0.846
chr2	232477358	232477521	reg1008247.p1	11.231	+	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	-19822	+	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	-82285	-	BC033054 TSC_hg19_v1_chr2_-_232379076	-98357	-	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	95795	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	95893	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	168486	-	NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta	0.999916	CTCF.p2:1:1.000
chr11	72953777	72953897	reg1007586.p2	11.230	+	AK313942 TSC_hg19_v1_chr11_+_72929608	-24221	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	-24391	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	-24493	+	NM_176796 NM_176797 AF007891	21739	+	AF007892 AX775903 NM_176798	27101	+	BC009391 NM_004154 BC000571 AF218005 X97058 AK311529 U52464	29502	+	AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176796|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176797|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007891|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007892|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AX775903|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176798|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##BC009391|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_004154|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##BC000571|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF218005|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##X97058|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##U52464|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6	0.999584	CTCF.p2:3:1.000
chr1	87791774	87791908	reg1010247.p1	11.230	+	TSC_hg19_v1_chr1_+_87595568 BC030523	-196292	+	AB007917 TSC_hg19_v1_chr1_+_87380462	-411384	+	TSC_hg19_v1_chr1_+_87380374 BC025384 BC025990 NM_001134492 NM_012262 AK023260 AB024568 BC108735	-411488	+	NM_006769 U24576 TSC_hg19_v1_chr1_+_87794164	2316	+	AK292578 TSC_hg19_v1_chr1_+_87794564	2718	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	2840	+	BC030523|LOC339524|339524|uncharacterized LOC339524##AB007917|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025384|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025990|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_001134492|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_012262|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AK023260|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AB024568|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC108735|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_006769|LMO4|8543|LIM domain only 4##U24576|LMO4|8543|LIM domain only 4##AK292578|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4	0.0	
chr20	36162914	36163070	reg1009932.p1	11.230	+	TSC_hg19_v1_chr20_-_36156284 AK074498 NM_001167820 NM_006698	-6680	-	TSC_hg19_v1_chr20_-_36156274 AK124822 AF053470 BC047692 AL049288	-6739	-	NM_001167822 TSC_hg19_v1_chr20_-_36156087 BC071704 NM_001167821	-6885	-	TSC_hg19_v1_chr20_+_36322440 NM_030877 BC121005 BC121006 AF239607	159438	+	AK074663 AK130301 TSC_hg19_v1_chr20_+_36322443	159452	+	TSC_hg19_v1_chr20_+_36322503 AF370431 AK293420	159491	+	AK074498|BLCAP|10904|bladder cancer associated protein##NM_001167820|BLCAP|10904|bladder cancer associated protein##NM_006698|BLCAP|10904|bladder cancer associated protein##AK124822|BLCAP|10904|bladder cancer associated protein##AF053470|BLCAP|10904|bladder cancer associated protein##BC047692|BLCAP|10904|bladder cancer associated protein##AL049288|BLCAP|10904|bladder cancer associated protein##NM_001167822|BLCAP|10904|bladder cancer associated protein##BC071704|BLCAP|10904|bladder cancer associated protein##NM_001167821|BLCAP|10904|bladder cancer associated protein##NM_030877|CTNNBL1|56259|catenin, beta like 1##BC121005|CTNNBL1|56259|catenin, beta like 1##BC121006|CTNNBL1|56259|catenin, beta like 1##AF239607|CTNNBL1|56259|catenin, beta like 1##AK074663|CTNNBL1|56259|catenin, beta like 1##AK130301|CTNNBL1|56259|catenin, beta like 1##AF370431|CTNNBL1|56259|catenin, beta like 1##AK293420|CTNNBL1|56259|catenin, beta like 1	0.304406	CTCF.p2:19:0.304
chr2	119622821	119622951	reg1007301.p1	11.230	+	NM_001426	-17128	-	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-776823	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-851153	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	76934	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	293518	-	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	358499	+	NM_001426|EN1|2019|engrailed homeobox 1##AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase	0.0	
chr7	103872001	103872132	reg1010172.p1	11.230	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-23635	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-242070	-	TSC_hg19_v1_chr7_-_103086511 AF523354 AY256823 AY256824 AY256825 AK126898 NM_001167962 NM_198999 NM_206883 NM_206884 NM_206885	-785499	-	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	97152	+	TSC_hg19_v1_chr7_-_104567089 BC050337	695024	-	TSC_hg19_v1_chr7_-_104653491 AK124046	781416	-	DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##AF523354|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256823|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256824|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256825|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AK126898|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_001167962|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_198999|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206883|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206884|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206885|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC050337|LOC723809|723809|uncharacterized LOC723809##AK124046|LOC100216545|100216545|uncharacterized LOC100216545	0.78403	CTCF.p2:-8:0.784
chr9	74434176	74434313	reg1010557.p1	11.229	+	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	-50666	-	AL136545 TSC_hg19_v1_chr9_-_74061901	-372361	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	-697708	-	AF151825 TSC_hg19_v1_chr9_-_74525994	91681	-	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	91912	-	TSC_hg19_v1_chr9_+_74526393 NM_182505 BC010179	92157	+	BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2##AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF151825|FAM108B1|51104|family with sequence similarity 108, member B1##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1##NM_182505|C9orf85|138241|chromosome 9 open reading frame 85##BC010179|C9orf85|138241|chromosome 9 open reading frame 85	0.99235	CTCF.p2:1:0.992
chr11	18001432	18001567	reg1010696.p1	11.228	+	NM_001112741 NM_004976 AB529092	-243980	+	NM_002478 AK314968 TSC_hg19_v1_chr11_+_17741117 BC000353 X56677 BC064493 AB463907 BT007157	-260280	+	CU677569 TSC_hg19_v1_chr11_-_17565964 AK290788 AK300936 AB018687 BC016057 AF039699 AF039700 AK225614 NM_005709 NM_153676	-435582	-	TSC_hg19_v1_chr11_-_18034463 AK294022	32951	-	TSC_hg19_v1_chr11_-_18034595 AJ243950 AJ243951 BC000707 NM_012139	33064	-	BC065375 AK292286 TSC_hg19_v1_chr11_-_18034745	33217	-	NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_002478|MYOD1|4654|myogenic differentiation 1##AK314968|MYOD1|4654|myogenic differentiation 1##X56677|MYOD1|4654|myogenic differentiation 1##BC064493|MYOD1|4654|myogenic differentiation 1##BT007157|MYOD1|4654|myogenic differentiation 1##AK290788|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK300936|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AB018687|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##BC016057|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039699|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039700|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK225614|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_005709|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_153676|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK294022|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243950|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243951|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC000707|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##NM_012139|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC065375|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AK292286|SERGEF|26297|secretion regulating guanine nucleotide exchange factor	0.976199	CTCF.p2:-2:0.976
chr15	92769361	92769498	reg1011446.p1	11.228	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-371862	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	-372332	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	-372486	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	167770	+	AK057393 NM_153040	245477	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	429450	-	AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B	0.982255	CTCF.p2:5:0.982
chr10	7302475	7302585	reg1007458.p1	11.227	+	TSC_hg19_v1_chr10_+_6622460 AY007155	-680050	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	-680269	-	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-1057654	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	148720	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	150904	-	AK027849 TSC_hg19_v1_chr10_-_7659249	356687	-	AY007155|LOC439949|439949|uncharacterized LOC439949##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.039998	
chr10	95314659	95314776	reg1009394.p1	11.227	+	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	-58329	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	-72669	-	AK075374 NM_000783 AF005418	-481061	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	11792	+	X00129 TSC_hg19_v1_chr10_-_95360993 BC020633 NM_006744	46261	-	NM_006204 U31973 BC111377	57690	+	NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1##X00129|RBP4|5950|retinol binding protein 4, plasma##BC020633|RBP4|5950|retinol binding protein 4, plasma##NM_006744|RBP4|5950|retinol binding protein 4, plasma##NM_006204|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##U31973|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##BC111377|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime	0.99052	CTCF.p2:5:0.991
chr13	32575528	32575671	reg1008396.p1	11.227	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-154697	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-261886	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-801389	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	29842	+	BC146956 BC146965 NM_001136571	310490	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	314018	+	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset	0.687054	CTCF.p2:2:0.687
chr9	34500757	34500885	reg1010335.p1	11.227	+	NM_012144 BC030583 AK290696 AF091619 AK314639 AK303937 AK302186 AK302499 DQ890609 EU176231	-41915	+	TSC_hg19_v1_chr9_-_34458569 AK299882 AK096350 AK123887 AK294054 BC041009 NM_001184940 NM_001184941 NM_001184942 NM_001184943 NM_001184945 NM_147202	-42294	-	AK058087 BC022084 BC029484 NM_032596	-103004	-	TSC_hg19_v1_chr9_-_34522975 BC022101 NM_198573	22183	-	TSC_hg19_v1_chr9_-_34589723 BC001492 M73238 NM_001842 NM_147164	88918	-	NM_001207011 TSC_hg19_v1_chr9_-_34590150	89329	-	NM_012144|DNAI1|27019|dynein, axonemal, intermediate chain 1##BC030583|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK290696|DNAI1|27019|dynein, axonemal, intermediate chain 1##AF091619|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK314639|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK303937|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK302186|DNAI1|27019|dynein, axonemal, intermediate chain 1##DQ890609|DNAI1|27019|dynein, axonemal, intermediate chain 1##EU176231|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK299882|C9orf25|203259|chromosome 9 open reading frame 25##AK096350|C9orf25|203259|chromosome 9 open reading frame 25##AK123887|C9orf25|203259|chromosome 9 open reading frame 25##AK294054|C9orf25|203259|chromosome 9 open reading frame 25##BC041009|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184940|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184941|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184942|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184943|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184945|C9orf25|203259|chromosome 9 open reading frame 25##NM_147202|C9orf25|203259|chromosome 9 open reading frame 25##AK058087|C9orf24|84688|chromosome 9 open reading frame 24##BC022084|C9orf24|84688|chromosome 9 open reading frame 24##BC029484|C9orf24|84688|chromosome 9 open reading frame 24##NM_032596|C9orf24|84688|chromosome 9 open reading frame 24##BC022101|ENHO|375704|energy homeostasis associated##NM_198573|ENHO|375704|energy homeostasis associated##BC001492|CNTFR|1271|ciliary neurotrophic factor receptor##M73238|CNTFR|1271|ciliary neurotrophic factor receptor##NM_001842|CNTFR|1271|ciliary neurotrophic factor receptor##NM_147164|CNTFR|1271|ciliary neurotrophic factor receptor##NM_001207011|CNTFR|1271|ciliary neurotrophic factor receptor	1.043826	CTCF.p2:12:1.000
chr2	170623917	170624044	reg1008454.p1	11.226	+	TSC_hg19_v1_chr2_+_170590477 BC010437	-33493	+	TSC_hg19_v1_chr2_+_170590371 NM_144711 AX721220	-33645	+	TSC_hg19_v1_chr2_+_170550978 AK314915 NM_001008489 NM_001199285 NM_001199286 NM_001199287 NM_001199288 NM_001199290 BC106013 AK090653 AX746559	-72963	+	NM_003142 TSC_hg19_v1_chr2_+_170655388 BC020818 D28394 J04205 BC001289 DQ185046 X13697	31436	+	TSC_hg19_v1_chr2_+_170662051 M20328 M35261	38164	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	57405	-	BC010437|KLHL23|151230|kelch-like 23 (Drosophila)##NM_144711|KLHL23|151230|kelch-like 23 (Drosophila)##AK314915|PHOSPHO2|493911|phosphatase, orphan 2##NM_001008489|PHOSPHO2|493911|phosphatase, orphan 2##NM_001199285|PHOSPHO2|493911|phosphatase, orphan 2##NM_001199286|PHOSPHO2|493911|phosphatase, orphan 2##NM_001199287|PHOSPHO2|493911|phosphatase, orphan 2##NM_001199288|PHOSPHO2|493911|phosphatase, orphan 2##NM_001199290|PHOSPHO2-KLHL23|100526832|PHOSPHO2-KLHL23 readthrough##BC106013|PHOSPHO2|493911|phosphatase, orphan 2##AK090653|PHOSPHO2-KLHL23|100526832|PHOSPHO2-KLHL23 readthrough##AX746559|PHOSPHO2-KLHL23|100526832|PHOSPHO2-KLHL23 readthrough##NM_003142|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##BC020818|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##D28394|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##J04205|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##BC001289|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##DQ185046|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##X13697|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##M20328|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##M35261|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5	0.956469	CTCF.p2:0:0.956
chr2	85154237	85154362	reg1008342.p2	11.226	+	TSC_hg19_v1_chr2_+_85133055 M92381	-21237	+	NM_021103 AK130949 D28363 TSC_hg19_v1_chr2_+_85132779 AK311952 BC016731 BC107889 S54005 BC016025 M20259 AY453400	-21504	+	TSC_hg19_v1_chr2_-_85108241 NM_001080824 BC051789	-45996	-	TSC_hg19_v1_chr2_+_85198299 NM_020122	43985	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	44192	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	206360	+	M92381|TMSB10|9168|thymosin beta 10##NM_021103|TMSB10|9168|thymosin beta 10##AK130949|TMSB10|9168|thymosin beta 10##AK311952|TMSB10|9168|thymosin beta 10##BC016731|TMSB10|9168|thymosin beta 10##BC107889|TMSB10|9168|thymosin beta 10##S54005|TMSB10|9168|thymosin beta 10##BC016025|TMSB10|9168|thymosin beta 10##M20259|TMSB10|9168|thymosin beta 10##AY453400|TMSB10|9168|thymosin beta 10##NM_001080824|C2orf89|129293|chromosome 2 open reading frame 89##BC051789|C2orf89|129293|chromosome 2 open reading frame 89##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	0.999793	CTCF.p2:16:1.000
chr7	302896	303067	reg1008735.p1	11.226	+	BC040074 TSC_hg19_v1_chr7_+_193137	-109836	+	AF533706 NM_020223 TSC_hg19_v1_chr7_+_193043	-109964	+	None	None	None	NM_001195127	27154	+	TSC_hg19_v1_chr7_-_558849 AK292217	255853	-	X03795 X06374 TSC_hg19_v1_chr7_-_559093	256083	-	BC040074|FAM20C|56975|family with sequence similarity 20, member C##AF533706|FAM20C|56975|family with sequence similarity 20, member C##NM_020223|FAM20C|56975|family with sequence similarity 20, member C##NM_001195127|LOC100288524|100288524|forkhead box L1-like##AK292217|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X03795|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X06374|PDGFA|5154|platelet-derived growth factor alpha polypeptide	3.993055	CTCF.p2:-21:0.999	CTCF.p2:31:0.999	CTCF.p2:-74:0.997	CTCF.p2:84:0.999
chr16	87669214	87669328	reg1010733.p1	11.225	+	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	-32561	+	TSC_hg19_v1_chr16_+_87636574 AB042636	-32693	+	AB593088 TSC_hg19_v1_chr16_+_87636492 NM_020655 BC036533	-32770	+	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	130244	-	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	130299	-	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	233804	-	DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3##AB042636|JPH3|57338|junctophilin 3##NM_020655|JPH3|57338|junctophilin 3##BC036533|JPH3|57338|junctophilin 3##BC001044|KLHDC4|54758|kelch domain containing 4##BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5	0.975734	CTCF.p2:9:0.976
chr4	141772292	141772414	reg1008016.p1	11.224	+	NM_015130 TSC_hg19_v1_chr4_-_141677529	-94854	-	U28480 BC069556 BC096736 BC098168 BC098258 BC098352 NM_021833	-282433	-	TSC_hg19_v1_chr4_+_141445351 BX648843 BC015168 AK093087	-326998	+	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	282178	-	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	369702	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	369733	+	NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)##U28480|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC069556|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC096736|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098168|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098258|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098352|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##NM_021833|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BX648843|ELMOD2|255520|ELMO/CED-12 domain containing 2##BC015168|ELMOD2|255520|ELMO/CED-12 domain containing 2##AK093087|ELMOD2|255520|ELMO/CED-12 domain containing 2##AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330	0.839615	CTCF.p2:25:0.840
chr11	10344669	10344827	reg1009999.p1	11.223	+	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	-18119	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	-28982	-	AK098060 TSC_hg19_v1_chr11_+_9779882	-564886	+	AK295046 NM_001172431	127119	+	NM_000480 BC126118 TSC_hg19_v1_chr11_+_10472246 AK311436 M84720 AK289998 AK294444 AK313039 HQ258646	127647	+	NM_001025389 D12775 AK308181 M84721 AK299113 TSC_hg19_v1_chr11_+_10476953	132071	+	AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK098060|LOC283104|283104|uncharacterized LOC283104##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3##NM_000480|AMPD3|272|adenosine monophosphate deaminase 3##BC126118|AMPD3|272|adenosine monophosphate deaminase 3##AK311436|AMPD3|272|adenosine monophosphate deaminase 3##M84720|AMPD3|272|adenosine monophosphate deaminase 3##AK289998|AMPD3|272|adenosine monophosphate deaminase 3##AK294444|AMPD3|272|adenosine monophosphate deaminase 3##AK313039|AMPD3|272|adenosine monophosphate deaminase 3##HQ258646|AMPD3|272|adenosine monophosphate deaminase 3##NM_001025389|AMPD3|272|adenosine monophosphate deaminase 3##D12775|AMPD3|272|adenosine monophosphate deaminase 3##AK308181|AMPD3|272|adenosine monophosphate deaminase 3##M84721|AMPD3|272|adenosine monophosphate deaminase 3##AK299113|AMPD3|272|adenosine monophosphate deaminase 3	0.972662	CTCF.p2:8:0.973
chr1	231227819	231227928	reg1008892.p1	11.222	+	TSC_hg19_v1_chr1_-_231176001 BC009447 NM_198552	-51882	-	TSC_hg19_v1_chr1_+_231114847 CU677601	-113009	+	AF321442 TSC_hg19_v1_chr1_+_231114837 AK293049 AF271780 AF290878 NM_022786 BC016309 AK026629	-113058	+	AK126782 NM_001004342 AY253917	70821	+	CU691424 TSC_hg19_v1_chr1_-_231376913 BC053609 AK303359 BC036800 BC062353 NM_152379 AK055124	149023	-	NM_014236 TSC_hg19_v1_chr1_+_231376946	149059	+	BC009447|FAM89A|375061|family with sequence similarity 89, member A##NM_198552|FAM89A|375061|family with sequence similarity 89, member A##AF321442|ARV1|64801|ARV1 homolog (S. cerevisiae)##AK293049|ARV1|64801|ARV1 homolog (S. cerevisiae)##AF271780|ARV1|64801|ARV1 homolog (S. cerevisiae)##AF290878|ARV1|64801|ARV1 homolog (S. cerevisiae)##NM_022786|ARV1|64801|ARV1 homolog (S. cerevisiae)##BC016309|ARV1|64801|ARV1 homolog (S. cerevisiae)##AK026629|ARV1|64801|ARV1 homolog (S. cerevisiae)##AK126782|TRIM67|440730|tripartite motif containing 67##NM_001004342|TRIM67|440730|tripartite motif containing 67##AY253917|TRIM67|440730|tripartite motif containing 67##BC053609|C1orf131|128061|chromosome 1 open reading frame 131##AK303359|C1orf131|128061|chromosome 1 open reading frame 131##BC036800|C1orf131|128061|chromosome 1 open reading frame 131##BC062353|C1orf131|128061|chromosome 1 open reading frame 131##NM_152379|C1orf131|128061|chromosome 1 open reading frame 131##AK055124|C1orf131|128061|chromosome 1 open reading frame 131##NM_014236|GNPAT|8443|glyceronephosphate O-acyltransferase	0.798477	CTCF.p2:4:0.798
chr2	100106951	100107087	reg1008189.p2	11.222	+	TSC_hg19_v1_chr2_-_100106480 AF206019 NM_001037872 NM_016316 BC037734	-510	-	TSC_hg19_v1_chr2_-_100106444 AK307719 AB047646 AF357886 AF151538	-579	-	AK025799 TSC_hg19_v1_chr2_-_100046333 AK025176 AJ131720	-60682	-	BC136579 BC144266 U34360 TSC_hg19_v1_chr2_-_100720992	613947	-	TSC_hg19_v1_chr2_-_100721160 AK290468	614164	-	BC040181 TSC_hg19_v1_chr2_+_100721424	614387	+	AF206019|REV1|51455|REV1 homolog (S. cerevisiae)##NM_001037872|REV1|51455|REV1 homolog (S. cerevisiae)##NM_016316|REV1|51455|REV1 homolog (S. cerevisiae)##BC037734|REV1|51455|REV1 homolog (S. cerevisiae)##AK307719|REV1|51455|REV1 homolog (S. cerevisiae)##AB047646|REV1|51455|REV1 homolog (S. cerevisiae)##AF357886|REV1|51455|REV1 homolog (S. cerevisiae)##AF151538|REV1|51455|REV1 homolog (S. cerevisiae)##AK025176|REV1|51455|REV1 homolog (S. cerevisiae)##AJ131720|REV1|51455|REV1 homolog (S. cerevisiae)##BC136579|AFF3|3899|AF4/FMR2 family, member 3##BC144266|AFF3|3899|AF4/FMR2 family, member 3##U34360|AFF3|3899|AF4/FMR2 family, member 3##AK290468|AFF3|3899|AF4/FMR2 family, member 3	0.950658	CTCF.p2:11:0.951
chr2	190615938	190616062	reg1008696.p1	11.222	+	AK126073 NM_144708	-75290	+	TSC_hg19_v1_chr2_+_190539326 BC037215 AK307328 BC047413	-76640	+	NM_019048 AK000759 TSC_hg19_v1_chr2_+_190526184 BC001243	-89829	+	AK314565 NM_022353 AK055441	11937	-	NM_000534 NM_001128143 NM_001128144	32810	+	TSC_hg19_v1_chr2_-_190649062 AF151036 AF395704 AK313533 BC005200	33034	-	AK126073|ANKAR|150709|ankyrin and armadillo repeat containing##NM_144708|ANKAR|150709|ankyrin and armadillo repeat containing##BC037215|ANKAR|150709|ankyrin and armadillo repeat containing##AK307328|ANKAR|150709|ankyrin and armadillo repeat containing##BC047413|ANKAR|150709|ankyrin and armadillo repeat containing##NM_019048|ASNSD1|54529|asparagine synthetase domain containing 1##AK000759|ASNSD1|54529|asparagine synthetase domain containing 1##BC001243|ASNSD1|54529|asparagine synthetase domain containing 1##AK314565|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1##NM_022353|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1##AK055441|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1##NM_000534|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##NM_001128143|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##NM_001128144|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AF151036|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AF395704|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AK313533|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##BC005200|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	0.973232	CTCF.p2:9:0.973
chr3	75471342	75471445	reg1007508.p1	11.221	+	AB384611 BC150608 NM_020872	-901091	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1797355	-	BC051316 BC064501 NM_018029	-2360584	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	12756	-	AK000525 NM_001124759	242090	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	250093	+	BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074	1.568177	CTCF.p2:-6:0.581	CTCF.p2:31:0.987
chr4	41663607	41663719	reg1009265.p1	11.220	+	TSC_hg19_v1_chr4_+_41614937 AK299835 CU686623	-48651	+	TSC_hg19_v1_chr4_+_41614918 AK298915 AK299297 BC068200 BX537916 CR749205 NM_001112719 NM_001112720	-48744	+	AK294774 TSC_hg19_v1_chr4_+_41614797	-48899	+	TSC_hg19_v1_chr4_+_41700736 AL117572	37113	+	BC017199 TSC_hg19_v1_chr4_-_41750743 AK311082	87069	-	TSC_hg19_v1_chr4_-_41750938 D82344 NM_003924	87298	-	AK299835|LIMCH1|22998|LIM and calponin homology domains 1##AK298915|LIMCH1|22998|LIM and calponin homology domains 1##AK299297|LIMCH1|22998|LIM and calponin homology domains 1##BC068200|LIMCH1|22998|LIM and calponin homology domains 1##BX537916|LIMCH1|22998|LIM and calponin homology domains 1##CR749205|LIMCH1|22998|LIM and calponin homology domains 1##NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1##NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1##AK294774|LIMCH1|22998|LIM and calponin homology domains 1##AL117572|LIMCH1|22998|LIM and calponin homology domains 1##BC017199|PHOX2B|8929|paired-like homeobox 2b##D82344|PHOX2B|8929|paired-like homeobox 2b##NM_003924|PHOX2B|8929|paired-like homeobox 2b	0.986776	CTCF.p2:3:0.987
chr12	27886130	27886256	reg1008436.p1	11.219	+	TSC_hg19_v1_chr12_+_27863764 BC015862 AK075378 AK075515 BC109372 BC063515 BC028346	-22419	+	NM_001190864 NM_021821 TSC_hg19_v1_chr12_+_27863756 AF182422	-22461	+	NM_001029874 BC140921 AY662682	-36730	+	NM_001146221	38015	-	TSC_hg19_v1_chr12_+_27933193 AK095405 NM_020782 BC137116 BC137117 BC108669 AB528162 AB587405 EU446834	47018	+	M26958 J03802 NM_198964 NM_198966 AK313476 M26960 BC005961 M26959	236772	-	BC015862|MRPS35|60488|mitochondrial ribosomal protein S35##AK075378|MRPS35|60488|mitochondrial ribosomal protein S35##AK075515|MRPS35|60488|mitochondrial ribosomal protein S35##BC109372|MRPS35|60488|mitochondrial ribosomal protein S35##BC063515|MRPS35|60488|mitochondrial ribosomal protein S35##BC028346|MRPS35|60488|mitochondrial ribosomal protein S35##NM_001190864|MRPS35|60488|mitochondrial ribosomal protein S35##NM_021821|MRPS35|60488|mitochondrial ribosomal protein S35##AF182422|MRPS35|60488|mitochondrial ribosomal protein S35##NM_001029874|REP15|387849|RAB15 effector protein##BC140921|REP15|387849|RAB15 effector protein##AY662682|REP15|387849|RAB15 effector protein##NM_001146221|MANSC4|100287284|MANSC domain containing 4##AK095405|KLHDC5|57542|kelch domain containing 5##NM_020782|KLHDC5|57542|kelch domain containing 5##BC137116|KLHDC5|57542|kelch domain containing 5##BC137117|KLHDC5|57542|kelch domain containing 5##BC108669|KLHDC5|57542|kelch domain containing 5##EU446834|KLHDC5|57542|kelch domain containing 5##M26958|PTHLH|5744|parathyroid hormone-like hormone##J03802|PTHLH|5744|parathyroid hormone-like hormone##NM_198964|PTHLH|5744|parathyroid hormone-like hormone##NM_198966|PTHLH|5744|parathyroid hormone-like hormone##AK313476|PTHLH|5744|parathyroid hormone-like hormone##M26960|PTHLH|5744|parathyroid hormone-like hormone##BC005961|PTHLH|5744|parathyroid hormone-like hormone##M26959|PTHLH|5744|parathyroid hormone-like hormone	0.070833	
chr12	9786919	9787038	reg1007327.p1	11.218	+	BC027885 BC113997 BC114516 U11276 NM_002258 AK292022	-26482	-	TSC_hg19_v1_chr12_-_9600810 BC035635 BC128040 BC111733	-186180	-	TSC_hg19_v1_chr12_+_9436619 AK123583 AK309820	-350353	+	TSC_hg19_v1_chr12_+_9800760 AK096274	13918	+	BC063128 NM_001197318 NM_013269 AK310150 NM_001004419 AK310554 AK313554 BC019883 AF133299 AF285087 CU676474 FN813349 FN813350 FN813351 NM_001197317 NM_001197319	35289	+	AF518873 BC093857 BC093859 NM_001253748 NM_001253750 NM_172004	98898	-	BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC035635|DDX12P|440081|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12, pseudogene##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK309820|LOC642846|642846|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like##AK096274|LOC374443|374443|CLR pseudogene##BC063128|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D##NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D##AK310150|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D##AK310554|CLEC2D|29121|C-type lectin domain family 2, member D##AK313554|CLEC2D|29121|C-type lectin domain family 2, member D##BC019883|CLEC2D|29121|C-type lectin domain family 2, member D##AF133299|CLEC2D|29121|C-type lectin domain family 2, member D##AF285087|CLEC2D|29121|C-type lectin domain family 2, member D##FN813349|CLEC2D|29121|C-type lectin domain family 2, member D##FN813350|CLEC2D|29121|C-type lectin domain family 2, member D##FN813351|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D##AF518873|CLECL1|160365|C-type lectin-like 1##BC093857|CLECL1|160365|C-type lectin-like 1##BC093859|CLECL1|160365|C-type lectin-like 1##NM_001253748|CLECL1|160365|C-type lectin-like 1##NM_001253750|CLECL1|160365|C-type lectin-like 1##NM_172004|CLECL1|160365|C-type lectin-like 1	0.99409	CTCF.p2:-4:0.994
chr16	11047922	11048033	reg1007592.p1	11.218	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-9534	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-11742	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-11811	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	302073	-	X63758 BC096135 BC096136 BC096137 NM_005425	315161	-	NM_021247	319474	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.998509	CTCF.p2:-3:0.999
chr16	84310977	84311096	reg1010052.p1	11.218	+	BC109203 BC008969 NM_172347	-37707	-	NM_001145400 NM_139174 AK093046 AX747882 AF447586 BC033491 AK315171 CU689630	-86258	+	TSC_hg19_v1_chr16_-_84220644 AK304739 L39059 AB209594 AK299060 AK097031 AK299347 BC028131 AK304261 AK315982 NM_001243156 NM_001243157 NM_001243158 NM_001243159 NM_001243160 NM_005679 NM_139353	-90412	-	AF302109 NM_021197 AF169631 TSC_hg19_v1_chr16_+_84328440 AK075061 BC029159 DQ893365 DQ896682	17452	+	TSC_hg19_v1_chr16_+_84402143 AK300526 AY791884 BX648333 NM_014861 AK316128 CR749829	91106	+	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	227255	-	BC109203|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##BC008969|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##NM_172347|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##NM_001145400|ADAD2|161931|adenosine deaminase domain containing 2##NM_139174|ADAD2|161931|adenosine deaminase domain containing 2##AK093046|ADAD2|161931|adenosine deaminase domain containing 2##AF447586|ADAD2|161931|adenosine deaminase domain containing 2##BC033491|ADAD2|161931|adenosine deaminase domain containing 2##AK315171|ADAD2|161931|adenosine deaminase domain containing 2##AK304739|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##L39059|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AB209594|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK299060|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK097031|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK299347|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##BC028131|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK304261|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK315982|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243156|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243157|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243158|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243159|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243160|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_005679|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_139353|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AF302109|WFDC1|58189|WAP four-disulfide core domain 1##NM_021197|WFDC1|58189|WAP four-disulfide core domain 1##AF169631|WFDC1|58189|WAP four-disulfide core domain 1##AK075061|WFDC1|58189|WAP four-disulfide core domain 1##BC029159|WFDC1|58189|WAP four-disulfide core domain 1##DQ893365|WFDC1|58189|WAP four-disulfide core domain 1##DQ896682|WFDC1|58189|WAP four-disulfide core domain 1##AK300526|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AY791884|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BX648333|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##NM_014861|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AK316128|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##CR749829|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609	0.999076	CTCF.p2:-8:0.999
chr9	96725376	96725488	reg1007624.p1	11.218	+	TSC_hg19_v1_chr9_-_96717638 BC064363	-7793	-	TSC_hg19_v1_chr9_-_96717589 AF213356 NM_021570	-7850	-	TSC_hg19_v1_chr9_+_96339042 NM_005392 BC064613 AB014562 BC152437 AL834263	-386509	+	TSC_hg19_v1_chr9_+_96793094 AY171233 NM_177995 BC067120 NM_001253830 BC051654	67683	+	NM_001253829 NM_152422 TSC_hg19_v1_chr9_+_96846745 BC031279 AK310403 AK289692	121319	+	TSC_hg19_v1_chr9_+_96846806 AK124912	121382	+	BC064363|BARX1|56033|BARX homeobox 1##AF213356|BARX1|56033|BARX homeobox 1##NM_021570|BARX1|56033|BARX homeobox 1##NM_005392|PHF2|5253|PHD finger protein 2##BC064613|PHF2|5253|PHD finger protein 2##AB014562|PHF2|5253|PHD finger protein 2##BC152437|PHF2|5253|PHD finger protein 2##AL834263|PHF2|5253|PHD finger protein 2##AY171233|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_177995|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC067120|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253830|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC051654|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253829|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_152422|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC031279|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK310403|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK289692|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK124912|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	0.999581	CTCF.p2:-1:1.000
chr7	5405782	5405904	reg1008097.p1	11.216	+	TSC_hg19_v1_chr7_+_5322595 AY485959 NM_001040661 NM_153247 AK092242 AX747426 AK296278 BC047592 BC025325	-83237	+	BC016912 AF151808 NM_001033520 AY691426	-151951	+	TSC_hg19_v1_chr7_+_5229923 AB463348 AM392901 AM393618 AM393628 CU675721 AY691425 CR533530	-175858	+	TSC_hg19_v1_chr7_-_5460842 BC140723	55063	-	AY129022 TSC_hg19_v1_chr7_-_5461555	55698	-	NM_001080495	57333	-	AY485959|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##NM_001040661|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##NM_153247|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AK092242|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AK296278|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC047592|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC025325|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC016912|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AF151808|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033520|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY691426|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM392901|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM393618|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM393628|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY691425|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##CR533530|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY129022|TNRC18|84629|trinucleotide repeat containing 18##NM_001080495|TNRC18|84629|trinucleotide repeat containing 18	0.998642	CTCF.p2:-6:0.999
chr14	61492090	61492199	reg1007700.p1	11.215	+	TSC_hg19_v1_chr14_+_61447962 BX648332 BC110378 BC064429 BX248072 AF070578 AK303839	-44089	+	TSC_hg19_v1_chr14_+_61447932 BC050349	-44208	+	NM_001172702 NM_153811 AF543422 TSC_hg19_v1_chr14_+_61447920	-44267	+	AB464738 TSC_hg19_v1_chr14_-_61747887	255733	-	BC101726 BC113559 TSC_hg19_v1_chr14_-_61747937	255781	-	TSC_hg19_v1_chr14_-_61747957 AK091169 AX746825	255821	-	BX648332|SLC38A6|145389|solute carrier family 38, member 6##BC110378|SLC38A6|145389|solute carrier family 38, member 6##BC064429|SLC38A6|145389|solute carrier family 38, member 6##BX248072|SLC38A6|145389|solute carrier family 38, member 6##AF070578|SLC38A6|145389|solute carrier family 38, member 6##AK303839|SLC38A6|145389|solute carrier family 38, member 6##BC050349|SLC38A6|145389|solute carrier family 38, member 6##NM_001172702|SLC38A6|145389|solute carrier family 38, member 6##NM_153811|SLC38A6|145389|solute carrier family 38, member 6##AF543422|SLC38A6|145389|solute carrier family 38, member 6##BC101726|TMEM30B|161291|transmembrane protein 30B##BC113559|TMEM30B|161291|transmembrane protein 30B##AK091169|TMEM30B|161291|transmembrane protein 30B	0.997664	CTCF.p2:-1:0.998
chr19	770389	770484	reg1005000.p1	11.215	+	TSC_hg19_v1_chr19_+_751132 BC052236 BX648389 BC042125 NM_173481	-19307	+	TSC_hg19_v1_chr19_+_708934 NM_001040134 NM_002579 AK299809 AK315168 BC032449 Y14770	-61487	+	BC137161 BC144505 NM_214710	-74976	-	TSC_hg19_v1_chr19_+_797414 NM_002819 NM_031990 NM_031991 NM_175847 X66975 BC002397 BC023219	26980	+	TSC_hg19_v1_chr19_+_797446 AB208910	27009	+	TSC_hg19_v1_chr19_+_797448 X62006 X65371 X65372	27013	+	BC052236|C19orf21|126353|chromosome 19 open reading frame 21##BX648389|C19orf21|126353|chromosome 19 open reading frame 21##BC042125|C19orf21|126353|chromosome 19 open reading frame 21##NM_173481|C19orf21|126353|chromosome 19 open reading frame 21##NM_001040134|PALM|5064|paralemmin##NM_002579|PALM|5064|paralemmin##AK315168|PALM|5064|paralemmin##BC032449|PALM|5064|paralemmin##Y14770|PALM|5064|paralemmin##BC137161|PRSS57|400668|protease, serine, 57##BC144505|PRSS57|400668|protease, serine, 57##NM_214710|PRSS57|400668|protease, serine, 57##NM_002819|PTBP1|5725|polypyrimidine tract binding protein 1##NM_031990|PTBP1|5725|polypyrimidine tract binding protein 1##NM_031991|PTBP1|5725|polypyrimidine tract binding protein 1##NM_175847|PTBP1|5725|polypyrimidine tract binding protein 1##X66975|PTBP1|5725|polypyrimidine tract binding protein 1##BC002397|PTBP1|5725|polypyrimidine tract binding protein 1##BC023219|PTBP1|5725|polypyrimidine tract binding protein 1##AB208910|PTBP1|5725|polypyrimidine tract binding protein 1##X62006|PTBP1|5725|polypyrimidine tract binding protein 1##X65371|PTBP1|5725|polypyrimidine tract binding protein 1##X65372|PTBP1|5725|polypyrimidine tract binding protein 1	0.999873	CTCF.p2:-9:1.000
chr11	6759255	6759397	reg1010313.p1	11.214	+	TSC_hg19_v1_chr11_-_6704541 CR457177 DQ891581 DQ894774 DQ895036 AB463889 BC012306 AK026857 AF164797 AF141338 NM_022061	-54752	-	TSC_hg19_v1_chr11_-_6676982 AB053446 NM_003737	-82363	-	TSC_hg19_v1_chr11_-_6643809 BC038382	-115465	-	NM_001004490 BC140734	30910	-	BC151143 NM_001004489	46921	+	BC101489 BC101491 NM_003696	57749	-	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17##DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17##DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17##DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17##BC012306|MRPL17|63875|mitochondrial ribosomal protein L17##AK026857|MRPL17|63875|mitochondrial ribosomal protein L17##AF164797|MRPL17|63875|mitochondrial ribosomal protein L17##AF141338|MRPL17|63875|mitochondrial ribosomal protein L17##NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17##AB053446|DCHS1|8642|dachsous 1 (Drosophila)##NM_003737|DCHS1|8642|dachsous 1 (Drosophila)##BC038382|DCHS1|8642|dachsous 1 (Drosophila)##NM_001004490|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC140734|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC151143|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##NM_001004489|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	0.58148	CTCF.p2:-23:0.581
chr8	134898464	134898583	reg1008165.p2	11.214	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-314426	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-589026	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-695193	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	810271	-	TSC_hg19_v1_chr8_-_135725053 AB463359	826556	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	826751	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.964892	CTCF.p2:1:0.965
chr14	76027406	76027541	reg1009903.p1	11.213	+	TSC_hg19_v1_chr14_+_75988840 D42106	-38621	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	-38683	+	BC051303 NM_001135049	-128637	+	NM_017791 AY260572 AY260577 BC019087 AK000378	17492	+	AK297002 NM_001195283	44331	+	AF134159 TSC_hg19_v1_chr14_-_76127220 AK311764 AL136658 AF136971 AF161406 BC002444	99723	-	D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AF134159|C14orf1|11161|chromosome 14 open reading frame 1##AK311764|C14orf1|11161|chromosome 14 open reading frame 1##AL136658|C14orf1|11161|chromosome 14 open reading frame 1##AF136971|C14orf1|11161|chromosome 14 open reading frame 1##AF161406|C14orf1|11161|chromosome 14 open reading frame 1##BC002444|C14orf1|11161|chromosome 14 open reading frame 1	0.993955	CTCF.p2:17:0.994
chr20	189729	189860	reg1009702.p1	11.213	+	AF525930 NM_001037732 BC140936	-19502	-	AY358796 AF525929 BC069486 BC109395 BC110085 NM_139074	-51641	+	AK225987 AJ236910 BC069294 NM_030931 AB590889 AF525928 AY122478	-66542	+	BC070359 NM_080831 AY122480 AY358186 CU687092 HQ447599 AF525931 AF529413	18119	+	AY358708 EF426755 NM_207469 BC137292 BC137293 AF525932 AY621329	48603	+	TSC_hg19_v1_chr20_-_271080 AK091924 AX747257 AK304526 BX640715 BC051762	81280	-	AF525930|DEFB128|245939|defensin, beta 128##NM_001037732|DEFB128|245939|defensin, beta 128##BC140936|DEFB128|245939|defensin, beta 128##AY358796|DEFB127|140850|defensin, beta 127##AF525929|DEFB127|140850|defensin, beta 127##BC069486|DEFB127|140850|defensin, beta 127##BC109395|DEFB127|140850|defensin, beta 127##BC110085|DEFB127|140850|defensin, beta 127##NM_139074|DEFB127|140850|defensin, beta 127##AK225987|DEFB126|81623|defensin, beta 126##AJ236910|DEFB126|81623|defensin, beta 126##BC069294|DEFB126|81623|defensin, beta 126##NM_030931|DEFB126|81623|defensin, beta 126##AF525928|DEFB126|81623|defensin, beta 126##AY122478|DEFB126|81623|defensin, beta 126##BC070359|DEFB129|140881|defensin, beta 129##NM_080831|DEFB129|140881|defensin, beta 129##AY122480|DEFB129|140881|defensin, beta 129##AY358186|DEFB129|140881|defensin, beta 129##HQ447599|DEFB129|140881|defensin, beta 129##AF525931|DEFB129|140881|defensin, beta 129##AF529413|DEFB129|140881|defensin, beta 129##AY358708|DEFB132|400830|defensin, beta 132##EF426755|DEFB132|400830|defensin, beta 132##NM_207469|DEFB132|400830|defensin, beta 132##BC137292|DEFB132|400830|defensin, beta 132##BC137293|DEFB132|400830|defensin, beta 132##AF525932|DEFB132|400830|defensin, beta 132##AY621329|DEFB132|400830|defensin, beta 132##AK091924|C20orf96|140680|chromosome 20 open reading frame 96##AK304526|C20orf96|140680|chromosome 20 open reading frame 96##BX640715|C20orf96|140680|chromosome 20 open reading frame 96##BC051762|C20orf96|140680|chromosome 20 open reading frame 96	0.471543	CTCF.p2:-11:0.472
chr4_ctg9_hap1	194198	194319	reg1009485.p1	11.213	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.992451	CTCF.p2:-20:0.992
chr6	148498906	148499042	reg1010373.p1	11.213	+	TSC_hg19_v1_chr6_+_147829825 NM_001030060	-669155	+	TSC_hg19_v1_chr6_+_147527118 AK128121	-971864	+	NM_001127715 NM_139244 AL834152 BC107737 BC113382 BC113408	-973418	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	164789	+	TSC_hg19_v1_chr6_+_148663973 AB018333	165016	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	165217	+	NM_001030060|SAMD5|389432|sterile alpha motif domain containing 5##AK128121|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001127715|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_139244|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AL834152|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC107737|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113382|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113408|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1	0.999753	CTCF.p2:-17:1.000
chr17	44121817	44121944	reg1008831.p2	11.212	+	TSC_hg19_v1_chr17_+_44101553 AB073354	-20310	+	BC130319 BC130321 NM_001007532 AY179170	-45250	+	TSC_hg19_v1_chr17_+_44068829 AY526356	-53046	+	TSC_hg19_v1_chr17_-_44270149 BX538006 NM_001193466	148274	-	TSC_hg19_v1_chr17_-_44270338 BC098376 NM_015443	148429	-	AK291259 NM_001193465	180847	-	AB073354|MAPT|4137|microtubule-associated protein tau##BC130319|STH|246744|saitohin##BC130321|STH|246744|saitohin##NM_001007532|STH|246744|saitohin##AY179170|STH|246744|saitohin##AY526356|MAPT|4137|microtubule-associated protein tau##BX538006|KIAA1267|284058|KIAA1267##NM_001193466|KIAA1267|284058|KIAA1267##BC098376|KIAA1267|284058|KIAA1267##NM_015443|KIAA1267|284058|KIAA1267##AK291259|KIAA1267|284058|KIAA1267##NM_001193465|KIAA1267|284058|KIAA1267	1.212363	CTCF.p2:15:0.998	CTCF.p2:-61:0.214
chr19	9190620	9190712	reg1008545.p2	11.212	+	AF414442 NM_024690 AM903345	-98645	-	BC112058 BC112064 NM_145208 AY038022 AB451462	-237355	+	TSC_hg19_v1_chr19_-_8942981 AK291265 AK307200	-247710	-	BC137551 BC137555 AB529309 NM_001004456	13221	+	NM_001005193	23315	-	NM_001005192	35772	-	AF414442|MUC16|94025|mucin 16, cell surface associated##NM_024690|MUC16|94025|mucin 16, cell surface associated##AM903345|MUC16|94025|mucin 16, cell surface associated##BC112058|MBD3L1|85509|methyl-CpG binding domain protein 3-like 1##BC112064|MBD3L1|85509|methyl-CpG binding domain protein 3-like 1##NM_145208|MBD3L1|85509|methyl-CpG binding domain protein 3-like 1##AY038022|MBD3L1|85509|methyl-CpG binding domain protein 3-like 1##AB451462|MBD3L1|85509|methyl-CpG binding domain protein 3-like 1##AK291265|ZNF558|148156|zinc finger protein 558##AK307200|ZNF558|148156|zinc finger protein 558##BC137551|OR1M1|125963|olfactory receptor, family 1, subfamily M, member 1##BC137555|OR1M1|125963|olfactory receptor, family 1, subfamily M, member 1##NM_001004456|OR1M1|125963|olfactory receptor, family 1, subfamily M, member 1##NM_001005193|OR7G2|390882|olfactory receptor, family 7, subfamily G, member 2##NM_001005192|OR7G1|125962|olfactory receptor, family 7, subfamily G, member 1	0.0	
chr3	34302222	34302341	reg1008710.p2	11.212	+	TSC_hg19_v1_chr3_+_33840125 AF250394 GQ131806 AB384596 CU676494 CU686637 BT007367	-462110	+	TSC_hg19_v1_chr3_+_33840120 AF151793 BC020066	-462174	+	TSC_hg19_v1_chr3_+_33840081 BC068454 AF349951	-462198	+	TSC_hg19_v1_chr3_+_35681016 BC041385 AK057559	1378820	+	BC051828 NM_016300	1381567	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	1418915	+	AF250394|PDCD6IP|10015|programmed cell death 6 interacting protein##GQ131806|PDCD6IP|10015|programmed cell death 6 interacting protein##BT007367|PDCD6IP|10015|programmed cell death 6 interacting protein##AF151793|PDCD6IP|10015|programmed cell death 6 interacting protein##BC020066|PDCD6IP|10015|programmed cell death 6 interacting protein##BC068454|PDCD6IP|10015|programmed cell death 6 interacting protein##AF349951|PDCD6IP|10015|programmed cell death 6 interacting protein##BC041385|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK057559|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	0.968674	CTCF.p2:5:0.969
chr7	102045181	102045292	reg1008308.p2	11.211	+	NM_024653 TSC_hg19_v1_chr7_+_102036839 AK023964 BC014298 DQ893168 DQ896466 AK294664	-8394	+	TSC_hg19_v1_chr7_+_102023018 AK098134	-22203	+	TSC_hg19_v1_chr7_+_102004338 BC048257 BC066362	-40884	+	TSC_hg19_v1_chr7_+_102073995 NM_001126340 NM_032831	28741	+	TSC_hg19_v1_chr7_+_102074021 AK056497 AK027639 AK300574	28805	+	TSC_hg19_v1_chr7_-_102105305 CU678220 BC002820 BC017096	59997	-	NM_024653|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK023964|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##BC014298|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ893168|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ896466|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK294664|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##NM_001126340|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_032831|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK056497|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK027639|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK300574|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##BC002820|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##BC017096|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)	0.085626	
chr7	8763868	8763996	reg1010574.p1	11.211	+	AK315141 TSC_hg19_v1_chr7_+_8474016 AK091655 BC047505 AK296248	-289812	+	AB047362 AB073665 NM_152745 TSC_hg19_v1_chr7_+_8473633	-290322	+	TSC_hg19_v1_chr7_+_8473238 AK095624	-290694	+	CR407618 CR541716 TSC_hg19_v1_chr7_-_10979730 AF201077 BC101794 BC101796	2215777	-	AK130950 TSC_hg19_v1_chr7_-_10979760 AK024837 U94586 BC105295 NM_002489	2215852	-	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	2249578	+	AK315141|NXPH1|30010|neurexophilin 1##AK091655|NXPH1|30010|neurexophilin 1##BC047505|NXPH1|30010|neurexophilin 1##AK296248|NXPH1|30010|neurexophilin 1##AB047362|NXPH1|30010|neurexophilin 1##AB073665|NXPH1|30010|neurexophilin 1##NM_152745|NXPH1|30010|neurexophilin 1##AK095624|NXPH1|30010|neurexophilin 1##CR407618|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR541716|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AF201077|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101794|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101796|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK130950|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK024837|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##U94586|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC105295|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_002489|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14	0.982289	CTCF.p2:-1:0.982
chr19	19601289	19601423	reg1010149.p1	11.210	+	TSC_hg19_v1_chr19_+_19496634 NM_017660 AK303482	-104650	+	TSC_hg19_v1_chr19_+_19431662 AB385396	-169692	+	TSC_hg19_v1_chr19_+_19431637 NM_015329 AB020699	-169722	+	AB464723 DQ891603 DQ894797 AF329483 AK058166 AK313767 BC014611 NM_032037 AF348077	25009	-	TSC_hg19_v1_chr19_+_19626536 AF261134	25209	+	NM_015965 TSC_hg19_v1_chr19_+_19627033 BC009189 AK298891 AK293859 AK293965 BC000589 AF286697	25680	+	NM_017660|GATAD2A|54815|GATA zinc finger domain containing 2A##AK303482|GATAD2A|54815|GATA zinc finger domain containing 2A##NM_015329|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AB020699|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##DQ891603|TSSK6|83983|testis-specific serine kinase 6##DQ894797|TSSK6|83983|testis-specific serine kinase 6##AF329483|TSSK6|83983|testis-specific serine kinase 6##AK058166|TSSK6|83983|testis-specific serine kinase 6##AK313767|TSSK6|83983|testis-specific serine kinase 6##BC014611|TSSK6|83983|testis-specific serine kinase 6##NM_032037|TSSK6|83983|testis-specific serine kinase 6##AF348077|TSSK6|83983|testis-specific serine kinase 6##AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##NM_015965|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC009189|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AK293859|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC000589|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AF286697|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	0.992538	CTCF.p2:16:0.993
chr6	31566461	31566589	reg1011755.p1	11.209	+	AB055881 AB590963 AJ223153 BC052582 BC018752 AF031136 AF031137 AF031138 NM_001145466 NM_001145467 NM_147130	-5896	-	BC103855 BC103856 NM_001166538 NM_007161 NM_205840 Y18486 Y18487 Y18488 Y18489 Y18490 AY852265 AY852266	-11500	+	AF000424 NM_205837 AF000426	-11976	+	TSC_hg19_v1_chr6_+_31583010 NM_004847 BC009474 NM_001623 U49392 AF088038 AK290771 U19713 D86438 EF070983 EU832665 EU832744	16517	+	TSC_hg19_v1_chr6_+_31583819 NM_032955 AF299329 EF070982 AF299327 CR542153	17302	+	TSC_hg19_v1_chr6_+_31588456 NM_004638 NM_080686	21926	+	AB055881|NCR3|259197|natural cytotoxicity triggering receptor 3##AJ223153|NCR3|259197|natural cytotoxicity triggering receptor 3##BC052582|NCR3|259197|natural cytotoxicity triggering receptor 3##BC018752|NCR3|259197|natural cytotoxicity triggering receptor 3##AF031136|NCR3|259197|natural cytotoxicity triggering receptor 3##AF031137|NCR3|259197|natural cytotoxicity triggering receptor 3##AF031138|NCR3|259197|natural cytotoxicity triggering receptor 3##NM_001145466|NCR3|259197|natural cytotoxicity triggering receptor 3##NM_001145467|NCR3|259197|natural cytotoxicity triggering receptor 3##NM_147130|NCR3|259197|natural cytotoxicity triggering receptor 3##BC103855|LST1|7940|leukocyte specific transcript 1##BC103856|LST1|7940|leukocyte specific transcript 1##NM_001166538|LST1|7940|leukocyte specific transcript 1##NM_007161|LST1|7940|leukocyte specific transcript 1##NM_205840|LST1|7940|leukocyte specific transcript 1##Y18486|LST1|7940|leukocyte specific transcript 1##Y18487|LST1|7940|leukocyte specific transcript 1##Y18488|LST1|7940|leukocyte specific transcript 1##Y18489|LST1|7940|leukocyte specific transcript 1##Y18490|LST1|7940|leukocyte specific transcript 1##AY852265|LST1|7940|leukocyte specific transcript 1##AY852266|LST1|7940|leukocyte specific transcript 1##AF000424|LST1|7940|leukocyte specific transcript 1##NM_205837|LST1|7940|leukocyte specific transcript 1##AF000426|LST1|7940|leukocyte specific transcript 1##NM_004847|AIF1|199|allograft inflammatory factor 1##BC009474|AIF1|199|allograft inflammatory factor 1##NM_001623|AIF1|199|allograft inflammatory factor 1##U49392|AIF1|199|allograft inflammatory factor 1##AF088038|AIF1|199|allograft inflammatory factor 1##AK290771|AIF1|199|allograft inflammatory factor 1##U19713|AIF1|199|allograft inflammatory factor 1##D86438|AIF1|199|allograft inflammatory factor 1##EF070983|AIF1|199|allograft inflammatory factor 1##EU832665|AIF1|199|allograft inflammatory factor 1##EU832744|AIF1|199|allograft inflammatory factor 1##NM_032955|AIF1|199|allograft inflammatory factor 1##EF070982|AIF1|199|allograft inflammatory factor 1##AF299327|AIF1|199|allograft inflammatory factor 1##CR542153|AIF1|199|allograft inflammatory factor 1##NM_004638|PRRC2A|7916|proline-rich coiled-coil 2A##NM_080686|PRRC2A|7916|proline-rich coiled-coil 2A	0.999083	CTCF.p2:8:0.999
chr11	9994560	9994677	reg1008726.p1	11.208	+	AK098060 TSC_hg19_v1_chr11_+_9779882	-214756	+	TSC_hg19_v1_chr11_+_9685669 AB014540 BC000134 CU674300 AF210818 AK304104	-308912	+	BC000616 TSC_hg19_v1_chr11_+_9685651 AF134894	-308967	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	321148	-	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	332011	+	AK295046 NM_001172431	477249	+	AK098060|LOC283104|283104|uncharacterized LOC283104##AB014540|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000134|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF210818|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AK304104|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000616|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF134894|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3	0.361743	CTCF.p2:7:0.362
chr17	27697241	27697377	reg1005348.p2	11.208	+	TSC_hg19_v1_chr17_-_27621167 AK293075 NM_020772	-76144	-	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	-76199	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	-123432	+	NM_020791 NM_025142 BC133039 BC144067	20636	+	TSC_hg19_v1_chr17_-_27893539 AK056717	196235	-	TSC_hg19_v1_chr17_-_27894056 BC012476 NM_198147 AY358212	196715	-	AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1##NM_020791|TAOK1|57551|TAO kinase 1##NM_025142|TAOK1|57551|TAO kinase 1##BC133039|TAOK1|57551|TAO kinase 1##BC144067|TAOK1|57551|TAO kinase 1##AK056717|ABHD15|116236|abhydrolase domain containing 15##BC012476|ABHD15|116236|abhydrolase domain containing 15##NM_198147|ABHD15|116236|abhydrolase domain containing 15##AY358212|ABHD15|116236|abhydrolase domain containing 15	0.992577	CTCF.p2:17:0.993
chr12	102878364	102878511	reg1008195.p2	11.207	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-4055	-	M11568 TSC_hg19_v1_chr12_-_102874344	-4095	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-4115	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	432529	-	TSC_hg19_v1_chr12_-_103311062 BC026251	432626	-	L47726 NM_000277 U49897	432943	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.979339	CTCF.p2:8:0.979
chr6	137487281	137487407	reg1007644.p2	11.207	+	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	-121099	-	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	-121506	-	AK316095 BC087842 NM_001008783 AK295424	-243891	+	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	7407	-	TSC_hg19_v1_chr6_-_137540496 BT006814 AB527981 CU675119 AF056979 AK294252	53124	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	53168	-	AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2##BT006814|IFNGR1|3459|interferon gamma receptor 1##AF056979|IFNGR1|3459|interferon gamma receptor 1##AK294252|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1	0.824885	CTCF.p2:13:0.825
chr17	48238975	48239094	reg1007630.p2	11.206	+	AJ401189 NM_032595 TSC_hg19_v1_chr17_-_48227977	-11108	-	TSC_hg19_v1_chr17_-_48207145 BC142728 BC136485 AY148482 NM_174920 AK291482 AK094209 AK225767 BC141822	-31885	-	TSC_hg19_v1_chr17_+_48172739 NM_001199900 NM_002611 AK297089 BC040478 BC063137 AK290522 AK293600 BC005811 L42451 NM_001199899	-66224	+	AK300710 TSC_hg19_v1_chr17_+_48243372 L34355 L35853 L46810 NM_000023 NM_001135697 AK293614 AK290622 BC025702 U08895 AB464188 DQ893777 CU693018	4348	+	TSC_hg19_v1_chr17_+_48262817 CU691369	23805	+	J00113 TSC_hg19_v1_chr17_-_48262921 M32790 M32798	23885	-	AJ401189|PPP1R9B|84687|protein phosphatase 1, regulatory subunit 9B##NM_032595|PPP1R9B|84687|protein phosphatase 1, regulatory subunit 9B##BC142728|SAMD14|201191|sterile alpha motif domain containing 14##BC136485|SAMD14|201191|sterile alpha motif domain containing 14##AY148482|SAMD14|201191|sterile alpha motif domain containing 14##NM_174920|SAMD14|201191|sterile alpha motif domain containing 14##AK291482|SAMD14|201191|sterile alpha motif domain containing 14##AK094209|SAMD14|201191|sterile alpha motif domain containing 14##AK225767|SAMD14|201191|sterile alpha motif domain containing 14##BC141822|SAMD14|201191|sterile alpha motif domain containing 14##NM_001199900|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_002611|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK297089|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC040478|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC063137|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK290522|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK293600|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC005811|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##L42451|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199899|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK300710|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L34355|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L35853|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L46810|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##NM_000023|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##NM_001135697|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##AK290622|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##BC025702|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##U08895|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##DQ893777|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##J00113|COL1A1|1277|collagen, type I, alpha 1##M32798|COL1A1|1277|collagen, type I, alpha 1	0.65254	CTCF.p2:-15:0.653
chr18	35358625	35358735	reg1004542.p1	11.206	+	NM_001025087 NM_001025088 NM_001025089 NM_020180	-212681	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	-212984	-	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-949560	-	TSC_hg19_v1_chr18_-_36915657 D28405	1556976	-	TSC_hg19_v1_chr18_-_37380279 AK090603	2021588	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	4176519	+	NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK090603|LOC647946|647946|uncharacterized LOC647946##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3	0.999575	CTCF.p2:-10:1.000
chr4	16266567	16266678	reg1007248.p1	11.206	+	TSC_hg19_v1_chr4_+_16228615 AK093550 AX748197 BC010030	-37986	+	TSC_hg19_v1_chr4_+_16228285 AK096972 BC132927	-38327	+	TSC_hg19_v1_chr4_-_16228103 BC066899 NM_153365	-38485	-	AK300119 AB463834 DQ891981 DQ895171 AK312881 TSC_hg19_v1_chr4_-_16900210 AF068651 AF047337 AF064492 AF064493 BC034019	633504	-	AK226029 TSC_hg19_v1_chr4_-_16900258	633637	-	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	633763	-	AK093550|FLJ39653|202020|uncharacterized FLJ39653##BC010030|FLJ39653|202020|uncharacterized FLJ39653##AK096972|FLJ39653|202020|uncharacterized FLJ39653##BC132927|FLJ39653|202020|uncharacterized FLJ39653##BC066899|TAPT1|202018|transmembrane anterior posterior transformation 1##NM_153365|TAPT1|202018|transmembrane anterior posterior transformation 1##AK300119|LDB2|9079|LIM domain binding 2##DQ891981|LDB2|9079|LIM domain binding 2##DQ895171|LDB2|9079|LIM domain binding 2##AK312881|LDB2|9079|LIM domain binding 2##AF068651|LDB2|9079|LIM domain binding 2##AF047337|LDB2|9079|LIM domain binding 2##AF064492|LDB2|9079|LIM domain binding 2##AF064493|LDB2|9079|LIM domain binding 2##BC034019|LDB2|9079|LIM domain binding 2##AK226029|LDB2|9079|LIM domain binding 2##AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2	0.933354	CTCF.p2:22:0.933
chr9	130547326	130547466	reg1009237.p1	11.205	+	BC032365 AK292718 AK096983 AK128287 NM_170600	-6417	-	CU693348 BC027962 AY358440 AF124251 AK292041 BX647905 NM_001252334 NM_005489	-13818	-	AK311510 NM_001142532 AK294386 NM_001142531	-22689	-	NM_001261 TSC_hg19_v1_chr9_+_130548312	912	+	TSC_hg19_v1_chr9_+_130548326 X80230	939	+	TSC_hg19_v1_chr9_+_130548375 L25676 BC001968 AK313828 AB590139 DQ891182 DQ894364 DQ894365 AB451289 AB451421 BT019903	996	+	BC032365|SH2D3C|10044|SH2 domain containing 3C##AK292718|SH2D3C|10044|SH2 domain containing 3C##AK096983|SH2D3C|10044|SH2 domain containing 3C##AK128287|SH2D3C|10044|SH2 domain containing 3C##NM_170600|SH2D3C|10044|SH2 domain containing 3C##BC027962|SH2D3C|10044|SH2 domain containing 3C##AY358440|SH2D3C|10044|SH2 domain containing 3C##AF124251|SH2D3C|10044|SH2 domain containing 3C##AK292041|SH2D3C|10044|SH2 domain containing 3C##BX647905|SH2D3C|10044|SH2 domain containing 3C##NM_001252334|SH2D3C|10044|SH2 domain containing 3C##NM_005489|SH2D3C|10044|SH2 domain containing 3C##AK311510|SH2D3C|10044|SH2 domain containing 3C##NM_001142532|SH2D3C|10044|SH2 domain containing 3C##AK294386|SH2D3C|10044|SH2 domain containing 3C##NM_001142531|SH2D3C|10044|SH2 domain containing 3C##NM_001261|CDK9|1025|cyclin-dependent kinase 9##X80230|CDK9|1025|cyclin-dependent kinase 9##L25676|CDK9|1025|cyclin-dependent kinase 9##BC001968|CDK9|1025|cyclin-dependent kinase 9##AK313828|CDK9|1025|cyclin-dependent kinase 9##DQ891182|CDK9|1025|cyclin-dependent kinase 9##DQ894364|CDK9|1025|cyclin-dependent kinase 9##DQ894365|CDK9|1025|cyclin-dependent kinase 9##AB451289|CDK9|1025|cyclin-dependent kinase 9##AB451421|CDK9|1025|cyclin-dependent kinase 9##BT019903|CDK9|1025|cyclin-dependent kinase 9	0.990651	CTCF.p2:20:0.991
chr1	12719108	12719242	reg1010109.p1	11.203	+	NM_001013630	-14610	+	DQ426869 DQ893006 DQ896252 CU678154 AF061741 AK222593 BC002730 TSC_hg19_v1_chr1_-_12677700 AK310202 AY358093 AK309282 AK312961 BX648476 NM_004753	-41592	-	TSC_hg19_v1_chr1_+_12403045 AK057675	-316105	+	AK127828 NM_001103169 NM_001103170	56942	+	BC029894 NM_152290 AK026705 AK298760	86991	+	NM_001080830	115808	+	NM_001013630|AADACL4|343066|arylacetamide deacetylase-like 4##DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK057675|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AK127828|AADACL3|126767|arylacetamide deacetylase-like 3##NM_001103169|AADACL3|126767|arylacetamide deacetylase-like 3##NM_001103170|AADACL3|126767|arylacetamide deacetylase-like 3##BC029894|C1orf158|93190|chromosome 1 open reading frame 158##NM_152290|C1orf158|93190|chromosome 1 open reading frame 158##AK026705|C1orf158|93190|chromosome 1 open reading frame 158##AK298760|C1orf158|93190|chromosome 1 open reading frame 158##NM_001080830|PRAMEF12|390999|PRAME family member 12	1.104725	CTCF.p2:0:0.999
chr19	11646985	11647125	reg1009680.p1	11.203	+	BC005119 BC000193 AK131241 TSC_hg19_v1_chr19_-_11639952 BC008279 NM_001142464 NM_001142465 NM_016581	-7098	-	AK314905 NM_001243204	-7376	-	TSC_hg19_v1_chr19_-_11616689 AK131037 NM_138783	-30334	-	BC022015 NM_001299 AK316406 BC036307 D17408 U37019 TSC_hg19_v1_chr19_+_11649667 AK223234 AK301888 AK313255 S80560 CU692454	2604	+	TSC_hg19_v1_chr19_-_11670046 AK097850 NM_032377	22978	-	X14618 TSC_hg19_v1_chr19_-_11688461	41396	-	BC005119|ECSIT|51295|ECSIT homolog (Drosophila)##BC000193|ECSIT|51295|ECSIT homolog (Drosophila)##BC008279|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001142464|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001142465|ECSIT|51295|ECSIT homolog (Drosophila)##NM_016581|ECSIT|51295|ECSIT homolog (Drosophila)##AK314905|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001243204|ECSIT|51295|ECSIT homolog (Drosophila)##AK131037|ZNF653|115950|zinc finger protein 653##NM_138783|ZNF653|115950|zinc finger protein 653##BC022015|CNN1|1264|calponin 1, basic, smooth muscle##NM_001299|CNN1|1264|calponin 1, basic, smooth muscle##AK316406|CNN1|1264|calponin 1, basic, smooth muscle##BC036307|CNN1|1264|calponin 1, basic, smooth muscle##D17408|CNN1|1264|calponin 1, basic, smooth muscle##U37019|CNN1|1264|calponin 1, basic, smooth muscle##AK223234|CNN1|1264|calponin 1, basic, smooth muscle##AK301888|CNN1|1264|calponin 1, basic, smooth muscle##AK313255|CNN1|1264|calponin 1, basic, smooth muscle##S80560|CNN1|1264|calponin 1, basic, smooth muscle##AK097850|ELOF1|84337|elongation factor 1 homolog (S. cerevisiae)##NM_032377|ELOF1|84337|elongation factor 1 homolog (S. cerevisiae)##X14618|ACP5|54|acid phosphatase 5, tartrate resistant	0.994453	CTCF.p2:-2:0.994
chr1	112912419	112912530	reg1008393.p2	11.202	+	AY863198 AF120491 NM_004980 NM_172198	-380752	-	TSC_hg19_v1_chr1_+_112298524 AK301697 AK001506 BC031062 BC011556 AF106019 AF155803 AK314312 DQ892249 DQ895449 CU679958	-613925	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	-614039	-	NM_018704 TSC_hg19_v1_chr1_+_112938844 AK023340	26352	+	TSC_hg19_v1_chr1_+_112938871 BC016029 AK022544 AK092791 AX747733	26394	+	AB045116 NM_004185	97565	+	AF120491|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_004980|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_172198|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##AK301697|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK001506|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC031062|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC011556|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF106019|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF155803|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK314312|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ892249|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ895449|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B##NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like##BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK092791|LOC100129406|100129406|uncharacterized LOC100129406##AB045116|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_004185|WNT2B|7482|wingless-type MMTV integration site family, member 2B	0.838832	CTCF.p2:10:0.777
chr4	112204346	112204469	reg1010291.p1	11.202	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-641129	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-646238	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-660132	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	862207	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	948677	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	1002594	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.928374	CTCF.p2:-2:0.928
chr2	161851021	161851145	reg1008486.p1	11.201	+	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	-500766	-	CU676342 D28482 X77494 AK225887 L11289 TSC_hg19_v1_chr2_-_161350025 AK309949 BC012992 BC012993 AK297812	-501124	-	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	-720894	-	NM_004180 NM_133484 U59863 U63830	142382	+	TSC_hg19_v1_chr2_+_162016938 AK313096 NM_001199135 BC067779	165866	+	NM_005805 TSC_hg19_v1_chr2_+_162164936 BC066336	313779	+	BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_004180|TANK|10010|TRAF family member-associated NFKB activator##NM_133484|TANK|10010|TRAF family member-associated NFKB activator##U59863|TANK|10010|TRAF family member-associated NFKB activator##U63830|TANK|10010|TRAF family member-associated NFKB activator##AK313096|TANK|10010|TRAF family member-associated NFKB activator##NM_001199135|TANK|10010|TRAF family member-associated NFKB activator##BC067779|TANK|10010|TRAF family member-associated NFKB activator##NM_005805|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##BC066336|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14	0.993452	CTCF.p2:22:0.993
chr1	28046206	28046320	reg1008826.p2	11.200	+	TSC_hg19_v1_chr1_-_27998734 NM_002038 NM_022872 NM_022873	-47524	-	TSC_hg19_v1_chr1_-_27998704 AK024814 AK314488	-47554	-	TSC_hg19_v1_chr1_-_27998690 X02492 BC011601 BC015603	-47586	-	TSC_hg19_v1_chr1_+_28052467 BC025768 NM_001143912 NM_001143913 NM_001143914 NM_001143915 NM_152660 AK290120 AK301672 AK098318 AK310165 AL035307 AL035309 CU693060	6265	+	TSC_hg19_v1_chr1_+_28099762 NM_177424 AF123769 AL035306 AK297585 BC046999 AB464269 CU692348 CR407620 AK299982	53508	+	NM_014110 TSC_hg19_v1_chr1_+_28157314	111023	+	NM_002038|IFI6|2537|interferon, alpha-inducible protein 6##NM_022872|IFI6|2537|interferon, alpha-inducible protein 6##NM_022873|IFI6|2537|interferon, alpha-inducible protein 6##AK024814|IFI6|2537|interferon, alpha-inducible protein 6##AK314488|IFI6|2537|interferon, alpha-inducible protein 6##X02492|IFI6|2537|interferon, alpha-inducible protein 6##BC011601|IFI6|2537|interferon, alpha-inducible protein 6##BC015603|IFI6|2537|interferon, alpha-inducible protein 6##BC025768|FAM76A|199870|family with sequence similarity 76, member A##NM_001143912|FAM76A|199870|family with sequence similarity 76, member A##NM_001143913|FAM76A|199870|family with sequence similarity 76, member A##NM_001143914|FAM76A|199870|family with sequence similarity 76, member A##NM_001143915|FAM76A|199870|family with sequence similarity 76, member A##NM_152660|FAM76A|199870|family with sequence similarity 76, member A##AK290120|FAM76A|199870|family with sequence similarity 76, member A##AK301672|FAM76A|199870|family with sequence similarity 76, member A##AK098318|FAM76A|199870|family with sequence similarity 76, member A##AK310165|FAM76A|199870|family with sequence similarity 76, member A##AL035307|FAM76A|199870|family with sequence similarity 76, member A##AL035309|FAM76A|199870|family with sequence similarity 76, member A##NM_177424|STX12|23673|syntaxin 12##AF123769|STX12|23673|syntaxin 12##AL035306|STX12|23673|syntaxin 12##AK297585|STX12|23673|syntaxin 12##BC046999|STX12|23673|syntaxin 12##CR407620|STX12|23673|syntaxin 12##AK299982|STX12|23673|syntaxin 12##NM_014110|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8	0.0	
chr3	58615954	58616092	reg1008626.p2	11.200	+	AF035283 NM_001076778 NM_007177	-52533	-	AB023811 TSC_hg19_v1_chr3_-_58563116 BC010561 AL050264 AK055443 AK128791 BC093012	-52914	-	AK298402 AK313512 BC033517 BC047700 TSC_hg19_v1_chr3_-_58522918 NM_003500	-93123	-	BC015359 TSC_hg19_v1_chr3_-_58652501 AK127546 NM_138805 AY358677	36498	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	419685	-	BC075863 TSC_hg19_v1_chr3_-_59035746	419718	-	AF035283|FAM107A|11170|family with sequence similarity 107, member A##NM_001076778|FAM107A|11170|family with sequence similarity 107, member A##NM_007177|FAM107A|11170|family with sequence similarity 107, member A##AB023811|FAM107A|11170|family with sequence similarity 107, member A##BC010561|FAM107A|11170|family with sequence similarity 107, member A##AL050264|FAM107A|11170|family with sequence similarity 107, member A##AK055443|FAM107A|11170|family with sequence similarity 107, member A##AK128791|FAM107A|11170|family with sequence similarity 107, member A##BC093012|FAM107A|11170|family with sequence similarity 107, member A##AK298402|ACOX2|8309|acyl-CoA oxidase 2, branched chain##AK313512|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC033517|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC047700|ACOX2|8309|acyl-CoA oxidase 2, branched chain##NM_003500|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC015359|FAM3D|131177|family with sequence similarity 3, member D##AK127546|FAM3D|131177|family with sequence similarity 3, member D##NM_138805|FAM3D|131177|family with sequence similarity 3, member D##AY358677|FAM3D|131177|family with sequence similarity 3, member D##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67	0.999299	CTCF.p2:11:0.999
chr15	40602362	40602465	reg1008886.p2	11.199	+	TSC_hg19_v1_chr15_-_40600137 AK291657 NM_004573	-2268	-	TSC_hg19_v1_chr15_-_40600085 BC009009	-2326	-	BC136467 M95678 TSC_hg19_v1_chr15_-_40600050	-2373	-	TSC_hg19_v1_chr15_-_40630272 BC140897 BC140902 AK126035	27889	-	TSC_hg19_v1_chr15_-_40633122 AK125329 NM_207380	30731	-	TSC_hg19_v1_chr15_+_40643233 NM_001145643 BC061640	40822	+	AK291657|PLCB2|5330|phospholipase C, beta 2##NM_004573|PLCB2|5330|phospholipase C, beta 2##BC009009|PLCB2|5330|phospholipase C, beta 2##BC136467|PLCB2|5330|phospholipase C, beta 2##M95678|PLCB2|5330|phospholipase C, beta 2##BC140897|C15orf52|388115|chromosome 15 open reading frame 52##BC140902|C15orf52|388115|chromosome 15 open reading frame 52##AK126035|C15orf52|388115|chromosome 15 open reading frame 52##AK125329|C15orf52|388115|chromosome 15 open reading frame 52##NM_207380|C15orf52|388115|chromosome 15 open reading frame 52##NM_001145643|PHGR1|644844|proline/histidine/glycine-rich 1##BC061640|PHGR1|644844|proline/histidine/glycine-rich 1	0.94361	CTCF.p2:0:0.944
chr4	100729552	100729667	reg1008761.p1	11.198	+	TSC_hg19_v1_chr4_+_100495977 AK225328 BC062696 X59657 AK290793 BC125110 BC125111 X75500 X91148	-233602	+	AK302602 NM_000253	-244370	+	AK000332 AK313548 NM_001134665 NM_001134666	-244429	-	NM_014395 AF186022 AF163254 AF161551 AK301355 AF178987 BC012924 AB528911 DQ893576 DQ894665	8416	+	AF130115 TSC_hg19_v1_chr4_-_100815585 AK311755 BC110402 BC005340 AK223311 AF201947 BC026245	85966	-	TSC_hg19_v1_chr4_-_100815667 NM_001243736 NM_021970	86075	-	AK225328|MTTP|4547|microsomal triglyceride transfer protein##BC062696|MTTP|4547|microsomal triglyceride transfer protein##X59657|MTTP|4547|microsomal triglyceride transfer protein##AK290793|MTTP|4547|microsomal triglyceride transfer protein##BC125110|MTTP|4547|microsomal triglyceride transfer protein##BC125111|MTTP|4547|microsomal triglyceride transfer protein##X75500|MTTP|4547|microsomal triglyceride transfer protein##X91148|MTTP|4547|microsomal triglyceride transfer protein##AK302602|MTTP|4547|microsomal triglyceride transfer protein##NM_000253|MTTP|4547|microsomal triglyceride transfer protein##AK000332|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##AK313548|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##NM_001134665|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##NM_001134666|RG9MTD2|93587|RNA (guanine-9-) methyltransferase domain containing 2##NM_014395|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF186022|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF163254|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF161551|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AK301355|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF178987|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##BC012924|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##DQ893576|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##DQ894665|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF130115|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##AK311755|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC110402|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC005340|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##AK223311|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##AF201947|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC026245|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##NM_001243736|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##NM_021970|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	0.988869	CTCF.p2:3:0.989
chr5	139737339	139737476	reg1009550.p1	11.198	+	M60278 BC033097 TSC_hg19_v1_chr5_-_139726189 AK222688 AK307310 AK313202 NM_001945	-11224	-	TSC_hg19_v1_chr5_-_139725861 EU832647 EU832724	-11519	-	TSC_hg19_v1_chr5_-_139682680 BC011869 BC003620 BC006202 AK223394 NM_002622	-54723	-	AF332961 NM_031467 AF336237 BC136262 BC143602 AF313465 AB032762	2399	+	TSC_hg19_v1_chr5_-_139780719 BC079833	43310	-	TSC_hg19_v1_chr5_-_139781027 BC030152	43634	-	M60278|HBEGF|1839|heparin-binding EGF-like growth factor##BC033097|HBEGF|1839|heparin-binding EGF-like growth factor##AK222688|HBEGF|1839|heparin-binding EGF-like growth factor##AK307310|HBEGF|1839|heparin-binding EGF-like growth factor##AK313202|HBEGF|1839|heparin-binding EGF-like growth factor##NM_001945|HBEGF|1839|heparin-binding EGF-like growth factor##EU832647|HBEGF|1839|heparin-binding EGF-like growth factor##EU832724|HBEGF|1839|heparin-binding EGF-like growth factor##BC011869|PFDN1|5201|prefoldin subunit 1##BC003620|PFDN1|5201|prefoldin subunit 1##BC006202|PFDN1|5201|prefoldin subunit 1##AK223394|PFDN1|5201|prefoldin subunit 1##NM_002622|PFDN1|5201|prefoldin subunit 1##AF332961|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##NM_031467|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AF336237|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##BC136262|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##BC143602|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AF313465|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AB032762|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9	0.444455	CTCF.p2:-1:0.444
chr5	152876460	152876575	reg1010377.p1	11.198	+	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	-6252	+	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	-1091766	-	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	-1572155	-	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	541940	-	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	542007	+	TSC_hg19_v1_chr5_+_153418558 AK315573 BC026244	542043	+	NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3##AK315573|MFAP3|4238|microfibrillar-associated protein 3##BC026244|MFAP3|4238|microfibrillar-associated protein 3	0.931846	CTCF.p2:-1:0.932
chr6	34023133	34023270	reg1010488.p1	11.198	+	BC112314 BC143981 Y00695 BC069675 NM_001040109 NM_001184698 NM_002418	-251427	-	BC039864 NM_181336 TSC_hg19_v1_chr6_-_33756906	-266291	-	TSC_hg19_v1_chr6_-_33756897 BC051803	-266310	-	AB385221 EU432124 HQ258665 HQ258669 U92457 BC130526 BC130528 BC144057 NM_000841 X80818 AK308669	78201	-	NM_002131 NM_145899 NM_145903 TSC_hg19_v1_chr6_+_34204617	181410	+	TSC_hg19_v1_chr6_+_34204649 AK096863 M23616 M23617 NM_145901 NM_145902 AK301434	181449	+	BC112314|MLN|4295|motilin##BC143981|MLN|4295|motilin##Y00695|MLN|4295|motilin##BC069675|MLN|4295|motilin##NM_001040109|MLN|4295|motilin##NM_001184698|MLN|4295|motilin##NM_002418|MLN|4295|motilin##BC039864|LEMD2|221496|LEM domain containing 2##NM_181336|LEMD2|221496|LEM domain containing 2##BC051803|LEMD2|221496|LEM domain containing 2##EU432124|GRM4|2914|glutamate receptor, metabotropic 4##HQ258665|GRM4|2914|glutamate receptor, metabotropic 4##HQ258669|GRM4|2914|glutamate receptor, metabotropic 4##U92457|GRM4|2914|glutamate receptor, metabotropic 4##BC130526|GRM4|2914|glutamate receptor, metabotropic 4##BC130528|GRM4|2914|glutamate receptor, metabotropic 4##BC144057|GRM4|2914|glutamate receptor, metabotropic 4##NM_000841|GRM4|2914|glutamate receptor, metabotropic 4##X80818|GRM4|2914|glutamate receptor, metabotropic 4##NM_002131|HMGA1|3159|high mobility group AT-hook 1##NM_145899|HMGA1|3159|high mobility group AT-hook 1##NM_145903|HMGA1|3159|high mobility group AT-hook 1##AK096863|HMGA1|3159|high mobility group AT-hook 1##M23616|HMGA1|3159|high mobility group AT-hook 1##M23617|HMGA1|3159|high mobility group AT-hook 1##NM_145901|HMGA1|3159|high mobility group AT-hook 1##NM_145902|HMGA1|3159|high mobility group AT-hook 1##AK301434|HMGA1|3159|high mobility group AT-hook 1	0.99996	CTCF.p2:4:1.000
chr1	8091400	8091550	reg1008740.p1	11.197	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-5077	-	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	-5114	-	AB528431 AJ276373 DQ892137 DQ895331 BC012839 TSC_hg19_v1_chr1_-_8075752	-15760	-	NM_001080397	292914	+	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	392542	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	786117	-	NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AJ276373|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ892137|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ895331|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC012839|ERRFI1|54206|ERBB receptor feedback inhibitor 1##NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats	0.200295	CTCF.p2:-29:0.200
chr2	58133405	58133538	reg1007975.p1	11.197	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-1720562	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-1721705	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-1722266	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	140283	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	140517	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	335011	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.0	
chr5	6292236	6292358	reg1007550.p2	11.197	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	-869388	+	TSC_hg19_v1_chr5_+_5422777 AK126937	-869522	+	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	-1151786	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	86353	-	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	156556	+	TSC_hg19_v1_chr5_+_6449114 AK057805	156892	+	AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1	0.066539	
chr10	4857624	4857805	reg1006488.p1	11.196	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-1030205	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-1030403	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-1642709	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	10704	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	147800	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	147909	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	1.999622	CTCF.p2:34:1.000	CTCF.p2:-75:1.000
chr6	86632782	86632917	reg1011124.p1	11.196	+	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	-244412	-	TSC_hg19_v1_chr6_-_86353055 AF037448 NM_001159677 NM_006372	-279824	-	TSC_hg19_v1_chr6_-_86352716 AF155568	-280134	-	NM_000865	1014174	+	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	1171969	-	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	1232440	+	BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##AF037448|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159677|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_006372|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AF155568|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292	0.995373	CTCF.p2:-10:0.995
chr7	131374025	131374138	reg1007735.p2	11.196	+	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	-132718	-	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-361442	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	-361475	+	TSC_hg19_v1_chr7_-_131833385 AL834504	459314	-	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	818839	-	AK123428 TSC_hg19_v1_chr7_-_132261230	887149	-	BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AL834504|PLXNA4|91584|plexin A4##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4##AK123428|PLXNA4|91584|plexin A4	0.999204	CTCF.p2:-13:0.999
chr21	45717660	45717765	reg1008909.p1	11.195	+	AB006683 AB006685 BC137268 BC137270 NM_000658	-7502	+	BC142608 AK309572 AB006682 NM_000383 Z97990	-11968	+	AF194032 NM_013369 NM_175867	-35614	-	TSC_hg19_v1_chr21_+_45719932 NM_002626 X15573	2215	+	TSC_hg19_v1_chr21_+_45719955 AK303605 AK308437	2244	+	TSC_hg19_v1_chr21_+_45719971 BC008964 BC009919 BC006422 AK091488 AX747017 BC007536 AB209127 CU675691 CU679201	2268	+	AB006683|AIRE|326|autoimmune regulator##AB006685|AIRE|326|autoimmune regulator##BC137268|AIRE|326|autoimmune regulator##BC137270|AIRE|326|autoimmune regulator##NM_000658|AIRE|326|autoimmune regulator##BC142608|AIRE|326|autoimmune regulator##AK309572|AIRE|326|autoimmune regulator##AB006682|AIRE|326|autoimmune regulator##NM_000383|AIRE|326|autoimmune regulator##Z97990|AIRE|326|autoimmune regulator##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_002626|PFKL|5211|phosphofructokinase, liver##X15573|PFKL|5211|phosphofructokinase, liver##AK303605|PFKL|5211|phosphofructokinase, liver##AK308437|PFKL|5211|phosphofructokinase, liver##BC008964|PFKL|5211|phosphofructokinase, liver##BC009919|PFKL|5211|phosphofructokinase, liver##BC006422|PFKL|5211|phosphofructokinase, liver##AK091488|PFKL|5211|phosphofructokinase, liver##BC007536|PFKL|5211|phosphofructokinase, liver##AB209127|PFKL|5211|phosphofructokinase, liver	0.096381	
chr11	31892731	31892863	reg1009857.p1	11.194	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-53319	-	AB209177 TSC_hg19_v1_chr11_-_31832871 BX640762 NM_000280 NM_001604	-59928	-	BC011953 TSC_hg19_v1_chr11_-_31832790	-60010	-	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	219680	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	219902	+	AK093168 BC032861 NM_001198551 NM_001198552	559563	-	AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AB209177|PAX6|5080|paired box 6##BX640762|PAX6|5080|paired box 6##NM_000280|PAX6|5080|paired box 6##NM_001604|PAX6|5080|paired box 6##BC011953|PAX6|5080|paired box 6##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1	0.08089	
chr1	27204577	27204684	reg1006811.p1	11.193	+	BC023552 AF029082 NM_006142 TSC_hg19_v1_chr1_+_27189639 BC001550 BC000329 BC002995 BC000995 AB464718 M93010 DQ894162 CU674492 CR541905 CR541926	-14965	+	TSC_hg19_v1_chr1_+_27153178 BC066776 NM_032283	-51433	+	AK000484 AK225521 AK301626 NM_001202554 AK056539	-89949	+	CU675813 AY364261 TSC_hg19_v1_chr1_-_27216757 BC007815 BC008634 BC020272	12045	-	TSC_hg19_v1_chr1_-_27216775 AK022535 AY358864	12142	-	TSC_hg19_v1_chr1_-_27216794 AK001211 NM_018066	12196	-	BC023552|SFN|2810|stratifin##AF029082|SFN|2810|stratifin##NM_006142|SFN|2810|stratifin##BC001550|SFN|2810|stratifin##BC000329|SFN|2810|stratifin##BC002995|SFN|2810|stratifin##BC000995|SFN|2810|stratifin##M93010|SFN|2810|stratifin##DQ894162|SFN|2810|stratifin##CR541905|SFN|2810|stratifin##CR541926|SFN|2810|stratifin##BC066776|ZDHHC18|84243|zinc finger, DHHC-type containing 18##NM_032283|ZDHHC18|84243|zinc finger, DHHC-type containing 18##AK000484|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK225521|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK301626|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_001202554|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK056539|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AY364261|GPN2|54707|GPN-loop GTPase 2##BC007815|GPN2|54707|GPN-loop GTPase 2##BC008634|GPN2|54707|GPN-loop GTPase 2##BC020272|GPN2|54707|GPN-loop GTPase 2##AK022535|GPN2|54707|GPN-loop GTPase 2##AY358864|GPN2|54707|GPN-loop GTPase 2##AK001211|GPN2|54707|GPN-loop GTPase 2##NM_018066|GPN2|54707|GPN-loop GTPase 2	0.997935	CTCF.p2:13:0.998
chr17	8657306	8657429	reg1009722.p1	11.193	+	BC029224 AK057296 NM_001158261 NM_144681	-9239	-	TSC_hg19_v1_chr17_-_8534040 M69181 AB210026 BC144668 BC150634 NM_005964 U34304 AB621820	-123321	-	BC008968 TSC_hg19_v1_chr17_-_8424250	-233131	-	BC146949 BC146966 BC171861 NM_001128076	4509	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	45185	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	113617	-	BC029224|CCDC42|146849|coiled-coil domain containing 42##AK057296|CCDC42|146849|coiled-coil domain containing 42##NM_001158261|CCDC42|146849|coiled-coil domain containing 42##NM_144681|CCDC42|146849|coiled-coil domain containing 42##M69181|MYH10|4628|myosin, heavy chain 10, non-muscle##AB210026|MYH10|4628|myosin, heavy chain 10, non-muscle##BC144668|MYH10|4628|myosin, heavy chain 10, non-muscle##BC150634|MYH10|4628|myosin, heavy chain 10, non-muscle##NM_005964|MYH10|4628|myosin, heavy chain 10, non-muscle##U34304|MYH10|4628|myosin, heavy chain 10, non-muscle##BC008968|MYH10|4628|myosin, heavy chain 10, non-muscle##BC146949|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC146966|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC171861|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##NM_001128076|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6	0.550575	CTCF.p2:-7:0.551
chr4	172571826	172571946	reg1008954.p1	11.193	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-1560472	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-1560688	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-1624381	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	162758	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	1518066	+	BC043556 TSC_hg19_v1_chr4_-_174090314	1518424	-	BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	1.137147	CTCF.p2:23:0.979
chrX	103342990	103343100	reg1005860.p1	11.193	+	AK093522 AX748182 NM_001164416	-48530	+	AY283370 BC118604 BC121816 BC038109 NM_001002916	-74802	-	TSC_hg19_v1_chrX_+_103217225 BC093093 NM_194324 BC028039 BC054476 AK291479 BC029803 BC035660	-125829	+	NM_001143978 TSC_hg19_v1_chrX_+_103357233	14139	+	TSC_hg19_v1_chrX_-_103401691 AL833609 NM_001012755	58612	-	TSC_hg19_v1_chrX_+_103411133 AK091221 AX746858 BC057847 NM_207318	68079	+	AK093522|H2BFM|286436|H2B histone family, member M##NM_001164416|H2BFM|286436|H2B histone family, member M##AY283370|H2BFWT|158983|H2B histone family, member W, testis-specific##BC118604|H2BFWT|158983|H2B histone family, member W, testis-specific##BC121816|H2BFWT|158983|H2B histone family, member W, testis-specific##BC038109|H2BFWT|158983|H2B histone family, member W, testis-specific##NM_001002916|H2BFWT|158983|H2B histone family, member W, testis-specific##BC093093|TMSB15B|286527|thymosin beta 15B##NM_194324|TMSB15B|286527|thymosin beta 15B##BC054476|TMSB15B|286527|thymosin beta 15B##AK291479|TMSB15B|286527|thymosin beta 15B##BC029803|TMSB15B|286527|thymosin beta 15B##BC035660|TMSB15B|286527|thymosin beta 15B##NM_001143978|ZCCHC18|644353|zinc finger, CCHC domain containing 18##AL833609|MCART6|401612|mitochondrial carrier triple repeat 6##NM_001012755|MCART6|401612|mitochondrial carrier triple repeat 6##AK091221|FAM199X|139231|family with sequence similarity 199, X-linked##BC057847|FAM199X|139231|family with sequence similarity 199, X-linked##NM_207318|FAM199X|139231|family with sequence similarity 199, X-linked	0.995973	CTCF.p2:-21:0.996
chrX	110090648	110090790	reg1010585.p1	11.193	+	NM_001143981 NM_001143982 NM_001143983	-51434	-	BC002909 AK293106 AK297563 AK312270 NM_145234	-51686	-	AK091430 NM_001171689	-407261	-	AK290504 NM_001128166 NM_001128167 TSC_hg19_v1_chrX_+_110187624 AK315284	96828	+	NM_002578 TSC_hg19_v1_chrX_+_110339395	248682	+	NM_001128168 NM_001128172 NM_001128173 AB102659 AF068864 AM943850 AM943851 AM943852	275598	+	NM_001143981|CHRDL1|91851|chordin-like 1##NM_001143982|CHRDL1|91851|chordin-like 1##NM_001143983|CHRDL1|91851|chordin-like 1##BC002909|CHRDL1|91851|chordin-like 1##AK293106|CHRDL1|91851|chordin-like 1##AK297563|CHRDL1|91851|chordin-like 1##AK312270|CHRDL1|91851|chordin-like 1##NM_145234|CHRDL1|91851|chordin-like 1##AK091430|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001171689|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128168|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128172|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128173|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AB102659|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AF068864|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943850|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943851|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943852|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	0.96979	CTCF.p2:6:0.970
chr17	62359445	62359563	reg1008126.p1	11.192	+	BC040522 NM_018469 TSC_hg19_v1_chr17_-_62340654	-18850	-	TSC_hg19_v1_chr17_-_62340645 BC036672	-18857	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	-18918	-	AF177201 CU679261 TSC_hg19_v1_chr17_-_62493178 AK307801 BC009194 NM_007215	133633	-	AB451257 AB451382 BT006943 DQ890687 DQ893774 AB384902 TSC_hg19_v1_chr17_-_62502320	142779	-	TSC_hg19_v1_chr17_-_62502393 BC016027 AB209919	142878	-	BC040522|TEX2|55852|testis expressed 2##NM_018469|TEX2|55852|testis expressed 2##BC036672|TEX2|55852|testis expressed 2##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2##AF177201|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##AK307801|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##BC009194|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##NM_007215|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##AB451257|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AB451382|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##BT006943|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##DQ890687|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##DQ893774|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##BC016027|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AB209919|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	0.44733	CTCF.p2:14:0.447
chr20	23976945	23977046	reg1008316.p1	11.192	+	BC040904 NM_178311	-7580	-	L20492 L20491 NM_178312	-9524	-	AB590893 CU686872 HQ447459 BC069514 X70377 BC062678 NM_001900	-116649	-	AK024282 NM_024893	472839	+	TSC_hg19_v1_chr20_+_24450295 BC030637	473307	+	TSC_hg19_v1_chr20_+_24929865 NM_003650	952868	+	BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20492|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20491|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178312|GGTLC1|92086|gamma-glutamyltransferase light chain 1##HQ447459|CST5|1473|cystatin D##BC069514|CST5|1473|cystatin D##X70377|CST5|1473|cystatin D##BC062678|CST5|1473|cystatin D##NM_001900|CST5|1473|cystatin D##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1##BC030637|SYNDIG1|79953|synapse differentiation inducing 1##NM_003650|CST7|8530|cystatin F (leukocystatin)	0.999956	CTCF.p2:-19:1.000
chr8	27721460	27721595	reg1010156.p1	11.191	+	TSC_hg19_v1_chr8_-_27695574 AK301836	-25968	-	TSC_hg19_v1_chr8_-_27695325 AF189722 AB027250 AK027291 AF237709 BC015191 AB027249 NM_018492	-26180	-	AF306677 AF306678 TSC_hg19_v1_chr8_+_27632070 AF306675 AY882862 NM_001017420 AK124215 AF306679 AL832666 BC017933 BC034641	-89528	+	NM_173833	128841	-	AB075870 NM_001010906	219860	-	NM_018091 TSC_hg19_v1_chr8_+_27950679 AK302140 AK296475 AK022626 AK295574 AK001284 AK293424 AK315985 AK316053 AK298265 BC001240 AL834273 AB463602 AM392633	229130	+	AK301836|PBK|55872|PDZ binding kinase##AF189722|PBK|55872|PDZ binding kinase##AB027250|PBK|55872|PDZ binding kinase##AK027291|PBK|55872|PDZ binding kinase##AF237709|PBK|55872|PDZ binding kinase##BC015191|PBK|55872|PDZ binding kinase##AB027249|PBK|55872|PDZ binding kinase##NM_018492|PBK|55872|PDZ binding kinase##AF306677|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF306678|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF306675|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AY882862|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##NM_001017420|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AK124215|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF306679|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AL832666|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##BC017933|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##BC034641|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##NM_173833|SCARA5|286133|scavenger receptor class A, member 5 (putative)##AB075870|C8orf80|389643|chromosome 8 open reading frame 80##NM_001010906|C8orf80|389643|chromosome 8 open reading frame 80##NM_018091|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK302140|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK296475|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK022626|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK295574|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK001284|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK293424|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK315985|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK316053|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK298265|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##BC001240|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AL834273|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AM392633|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)	0.577391	CTCF.p2:-15:0.577
chr11	71316192	71316305	reg1009531.p1	11.190	+	BC130498 BC130502 AB126080 NM_001005405	-22334	-	AB126079 BC137550 BC137566 NM_001012710	-39640	+	NM_005553 X63755 BC101744 AB126078 CU686892 BC069531	-56664	+	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	182359	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	208658	-	AF529416 NM_001002035	227997	+	BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11##AB126079|KRTAP5-10|387273|keratin associated protein 5-10##BC137550|KRTAP5-10|387273|keratin associated protein 5-10##BC137566|KRTAP5-10|387273|keratin associated protein 5-10##NM_001012710|KRTAP5-10|387273|keratin associated protein 5-10##NM_005553|KRTAP5-9|3846|keratin associated protein 5-9##X63755|KRTAP5-9|3846|keratin associated protein 5-9##BC101744|KRTAP5-9|3846|keratin associated protein 5-9##AB126078|KRTAP5-9|3846|keratin associated protein 5-9##BC069531|KRTAP5-9|3846|keratin associated protein 5-9##NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1##BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene##AF529416|DEFB108B|245911|defensin, beta 108B##NM_001002035|DEFB108B|245911|defensin, beta 108B	0.996917	CTCF.p2:-11:0.997
chr6	100564660	100564794	reg1008483.p1	11.190	+	AK123634 NM_001040179 NM_032503 AF347063	-122617	-	AY004253 NM_021620	-510078	+	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	-548124	-	NM_005068 U70212	346823	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	764373	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	764489	-	AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.980298	CTCF.p2:-1:0.980
chr12	120339947	120340087	reg1009687.p1	11.189	+	TSC_hg19_v1_chr12_-_120315112 AY209000 AY257469 BC008127 AY681966 NM_001206999 NM_007174	-24924	-	AK123136 TSC_hg19_v1_chr12_-_120241305	-98720	-	TSC_hg19_v1_chr12_+_120105769 AK312495 NM_006253 BC017671 AF022116 BC001007 BC001056 BC001823 BC018818 U83994 AK301165 Y12556 AB590811 AJ224515	-234165	+	TSC_hg19_v1_chr12_+_120427616 AK129960 NM_207311 U88834	87581	+	AF498960 BT020024 CR536486 CR541683 CU677517 DQ890586 DQ890603 DQ893750 AB528529 TSC_hg19_v1_chr12_-_120554547 X79781 AK304620	214484	-	TSC_hg19_v1_chr12_-_120554551 AK312538	214536	-	AY209000|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY257469|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##BC008127|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY681966|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_001206999|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_007174|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AK123136|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AK312495|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##NM_006253|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC017671|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AF022116|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001007|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001056|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001823|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC018818|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##U83994|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK301165|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##Y12556|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AJ224515|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK129960|CCDC64|92558|coiled-coil domain containing 64##NM_207311|CCDC64|92558|coiled-coil domain containing 64##U88834|CCDC64|92558|coiled-coil domain containing 64##AF498960|RAB35|11021|RAB35, member RAS oncogene family##BT020024|RAB35|11021|RAB35, member RAS oncogene family##CR536486|RAB35|11021|RAB35, member RAS oncogene family##CR541683|RAB35|11021|RAB35, member RAS oncogene family##DQ890586|RAB35|11021|RAB35, member RAS oncogene family##DQ890603|RAB35|11021|RAB35, member RAS oncogene family##DQ893750|RAB35|11021|RAB35, member RAS oncogene family##X79781|RAB35|11021|RAB35, member RAS oncogene family##AK304620|RAB35|11021|RAB35, member RAS oncogene family##AK312538|RAB35|11021|RAB35, member RAS oncogene family	0.128922	
chr19	12886501	12886591	reg1004035.p1	11.188	+	TSC_hg19_v1_chr19_-_12886422 NM_001100176 NM_013312	-119	-	CU680326 DQ891339 DQ893360 DQ894521 DQ896679 AB527820 TSC_hg19_v1_chr19_-_12886342 AF044924 BC012443	-219	-	AF440756 AY515705 NM_017682 AK000139 AK225232	-23108	+	TSC_hg19_v1_chr19_+_12902286 DQ650707	15744	+	AK222532 TSC_hg19_v1_chr19_+_12902299 AK313737 BC110372 BC004250 BC009465 BC009466 NM_002229 X51345	15767	+	BC000452 BC003022 BC064138 TSC_hg19_v1_chr19_-_12912615 Z22548 AK289485 AK293957 BC039428 AK022395 NM_005809 NM_181738	26118	-	NM_001100176|HOOK2|29911|hook homolog 2 (Drosophila)##NM_013312|HOOK2|29911|hook homolog 2 (Drosophila)##DQ891339|HOOK2|29911|hook homolog 2 (Drosophila)##DQ893360|HOOK2|29911|hook homolog 2 (Drosophila)##DQ894521|HOOK2|29911|hook homolog 2 (Drosophila)##DQ896679|HOOK2|29911|hook homolog 2 (Drosophila)##AF044924|HOOK2|29911|hook homolog 2 (Drosophila)##BC012443|HOOK2|29911|hook homolog 2 (Drosophila)##AF440756|BEST2|54831|bestrophin 2##AY515705|BEST2|54831|bestrophin 2##NM_017682|BEST2|54831|bestrophin 2##AK000139|BEST2|54831|bestrophin 2##AK225232|BEST2|54831|bestrophin 2##AK222532|JUNB|3726|jun B proto-oncogene##AK313737|JUNB|3726|jun B proto-oncogene##BC004250|JUNB|3726|jun B proto-oncogene##BC009465|JUNB|3726|jun B proto-oncogene##BC009466|JUNB|3726|jun B proto-oncogene##NM_002229|JUNB|3726|jun B proto-oncogene##X51345|JUNB|3726|jun B proto-oncogene##BC000452|PRDX2|7001|peroxiredoxin 2##BC003022|PRDX2|7001|peroxiredoxin 2##BC064138|PRDX2|7001|peroxiredoxin 2##Z22548|PRDX2|7001|peroxiredoxin 2##AK289485|PRDX2|7001|peroxiredoxin 2##AK293957|PRDX2|7001|peroxiredoxin 2##BC039428|PRDX2|7001|peroxiredoxin 2##AK022395|PRDX2|7001|peroxiredoxin 2##NM_005809|PRDX2|7001|peroxiredoxin 2##NM_181738|PRDX2|7001|peroxiredoxin 2	0.724838	CTCF.p2:-22:0.725
chr5	156680588	156680737	reg1008482.p3	11.188	+	BC094701 AB209622 D13720 NM_005546 BC109077 BC109078 AK312846 AK303609 AB590549	-72745	+	AY973323 CU692472 AF465821 BC025397 AK057543 BC022035 BC025409 BC025998 NM_130899	-87434	-	NM_001100816 TSC_hg19_v1_chr5_-_156569881 AK123613 AF031383 BC005250 BC006968 AK308393 NM_004270	-110810	-	TSC_hg19_v1_chr5_+_156693105 AL136549 NM_001037333 AK294220 AK295865 AK297401 AK303702 AB032994 AF160973 NM_001037332	12590	+	BC011762 BC021008 NM_014376	15694	+	AK289701 BC022570 NM_001001343	92038	-	AB209622|ITK|3702|IL2-inducible T-cell kinase##D13720|ITK|3702|IL2-inducible T-cell kinase##NM_005546|ITK|3702|IL2-inducible T-cell kinase##BC109077|ITK|3702|IL2-inducible T-cell kinase##BC109078|ITK|3702|IL2-inducible T-cell kinase##AK312846|ITK|3702|IL2-inducible T-cell kinase##AK303609|ITK|3702|IL2-inducible T-cell kinase##AY973323|FAM71B|153745|family with sequence similarity 71, member B##AF465821|FAM71B|153745|family with sequence similarity 71, member B##BC025397|FAM71B|153745|family with sequence similarity 71, member B##AK057543|FAM71B|153745|family with sequence similarity 71, member B##BC022035|FAM71B|153745|family with sequence similarity 71, member B##BC025409|FAM71B|153745|family with sequence similarity 71, member B##BC025998|FAM71B|153745|family with sequence similarity 71, member B##NM_130899|FAM71B|153745|family with sequence similarity 71, member B##NM_001100816|MED7|9443|mediator complex subunit 7##AF031383|MED7|9443|mediator complex subunit 7##BC005250|MED7|9443|mediator complex subunit 7##BC006968|MED7|9443|mediator complex subunit 7##AK308393|MED7|9443|mediator complex subunit 7##NM_004270|MED7|9443|mediator complex subunit 7##AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK289701|FNDC9|408263|fibronectin type III domain containing 9##BC022570|FNDC9|408263|fibronectin type III domain containing 9##NM_001001343|FNDC9|408263|fibronectin type III domain containing 9	0.711409	CTCF.p2:0:0.711
chr10	122182988	122183116	reg1010061.p1	11.187	+	NM_007190 TSC_hg19_v1_chr10_+_121652241 AB019435 AK021846 AK314592 AK001135 AK001135 AK301517 BC063800 BC063800 BC002540 AF116723 BX649119 BX649119 AB384691 CU687818 BT006755	-530863	+	AK023143 TSC_hg19_v1_chr10_-_121632359 BC004183 BC007219 NM_024834	-550712	-	TSC_hg19_v1_chr10_-_121602031 BC000935	-580989	-	NM_001030059 TSC_hg19_v1_chr10_+_122216486 BC101267 BC101268 BC101269 BC122535 BC132787 AK296273 HQ258170 AK310178	33587	+	NM_018117 TSC_hg19_v1_chr10_+_122610771	427676	+	TSC_hg19_v1_chr10_+_122610873 BC040469 AB037772 AK299524 AF320223 AK301761 BC071564 AK315145 AB385454	427843	+	NM_007190|SEC23IP|11196|SEC23 interacting protein##AB019435|SEC23IP|11196|SEC23 interacting protein##AK021846|SEC23IP|11196|SEC23 interacting protein##AK314592|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK301517|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC002540|SEC23IP|11196|SEC23 interacting protein##AF116723|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BT006755|SEC23IP|11196|SEC23 interacting protein##AK023143|MCMBP|79892|minichromosome maintenance complex binding protein##BC004183|MCMBP|79892|minichromosome maintenance complex binding protein##BC007219|MCMBP|79892|minichromosome maintenance complex binding protein##NM_024834|MCMBP|79892|minichromosome maintenance complex binding protein##BC000935|MCMBP|79892|minichromosome maintenance complex binding protein##NM_001030059|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101267|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101268|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101269|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC122535|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC132787|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##HQ258170|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AK310178|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##NM_018117|WDR11|55717|WD repeat domain 11##BC040469|WDR11|55717|WD repeat domain 11##AB037772|WDR11|55717|WD repeat domain 11##AK299524|WDR11|55717|WD repeat domain 11##AF320223|WDR11|55717|WD repeat domain 11##AK301761|WDR11|55717|WD repeat domain 11##BC071564|WDR11|55717|WD repeat domain 11##AK315145|WDR11|55717|WD repeat domain 11	0.928068	CTCF.p2:-3:0.928
chr13	34298099	34298214	reg1008107.p2	11.187	+	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	-47221	-	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	-373388	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	-438289	-	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	94071	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	94128	+	TSC_hg19_v1_chr13_+_35516429 NM_015678 AF467288	1218302	+	BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_015678|NBEA|26960|neurobeachin##AF467288|NBEA|26960|neurobeachin	0.263418	CTCF.p2:9:0.263
chr7	138701929	138702050	reg1008365.p1	11.187	+	TSC_hg19_v1_chr7_-_138666114 AM989468 AM989469 AM989472 AM989473 AM989474 NM_001164665 NM_020910	-35756	-	BC109304 BC109305 AF245517 AK292945 NM_020632 NM_130840	-219095	-	BC131697 AK055841 NM_001085429 BC058028	-219266	+	TSC_hg19_v1_chr7_-_138720787 BC008842 NM_080660 BC020784	18845	-	AK055851 BX647974 TSC_hg19_v1_chr7_-_138794101	92112	-	TSC_hg19_v1_chr7_-_138794133 AK292811	92184	-	AM989468|KIAA1549|57670|KIAA1549##AM989469|KIAA1549|57670|KIAA1549##NM_001164665|KIAA1549|57670|KIAA1549##NM_020910|KIAA1549|57670|KIAA1549##BC109304|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC109305|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AF245517|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AK292945|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_020632|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_130840|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC131697|TMEM213|155006|transmembrane protein 213##AK055841|TMEM213|155006|transmembrane protein 213##NM_001085429|TMEM213|155006|transmembrane protein 213##BC058028|TMEM213|155006|transmembrane protein 213##BC008842|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##NM_080660|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##BC020784|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##AK055851|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BX647974|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##AK292811|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1	0.933271	CTCF.p2:3:0.933
chr1	227950255	227950373	reg1009978.p1	11.186	+	CU676318 TSC_hg19_v1_chr1_+_227923140 BX648570 AK054633 BC011145 BC007786	-27182	+	TSC_hg19_v1_chr1_-_227923113 AK023030 AK022579 NM_001161465 NM_023007 AB528287	-27215	-	TSC_hg19_v1_chr1_-_227922985 BC011928	-27343	-	BC130400 HQ258179 NM_183062	53067	+	AB590917 HQ258230 AB060283 AK131041 TSC_hg19_v1_chr1_-_228135634 BC111960 BC113431 NM_003395	185317	-	NM_033131 AK056278 BC103921 BC103922 BC103923 AB060284	244459	+	BX648570|SNAP47|116841|synaptosomal-associated protein, 47kDa##AK054633|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC011145|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC007786|SNAP47|116841|synaptosomal-associated protein, 47kDa##AK023030|JMJD4|65094|jumonji domain containing 4##AK022579|JMJD4|65094|jumonji domain containing 4##NM_001161465|JMJD4|65094|jumonji domain containing 4##NM_023007|JMJD4|65094|jumonji domain containing 4##BC011928|JMJD4|65094|jumonji domain containing 4##BC130400|PRSS38|339501|protease, serine, 38##HQ258179|PRSS38|339501|protease, serine, 38##NM_183062|PRSS38|339501|protease, serine, 38##HQ258230|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AB060283|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AK131041|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC111960|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC113431|WNT9A|7483|wingless-type MMTV integration site family, member 9A##NM_003395|WNT9A|7483|wingless-type MMTV integration site family, member 9A##NM_033131|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK056278|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103921|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103922|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103923|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AB060284|WNT3A|89780|wingless-type MMTV integration site family, member 3A	1.081921	CTCF.p2:-9:0.980
chr9	89102296	89102429	reg1011232.p1	11.186	+	TSC_hg19_v1_chr9_-_88969326 AL832193 CR936608 AK055546 CR933644 AL832026 BX641077 CR933643 BC111003 NM_001185059 NM_001185074 NM_024617	-132989	-	AK308352 TSC_hg19_v1_chr9_-_88969321 BC032456	-133073	-	AB528754 AM393721 TSC_hg19_v1_chr9_-_88897454 BC053900 BC071621 AY015642 AL834356 AF284752 BC002675 AK055643 AK225937 AK309289 NM_030940	-204918	-	L13698 NM_002048	459741	-	AK127445 NM_001001709 BC132741 BC136791 HQ258059	661239	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	1010224	+	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC053900|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC071621|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AY015642|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AL834356|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AF284752|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC002675|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK055643|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK225937|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##NM_030940|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##L13698|GAS1|2619|growth arrest-specific 1##NM_002048|GAS1|2619|growth arrest-specific 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1	0.993286	CTCF.p2:-5:0.993
chr16	29703412	29703522	reg1007877.p2	11.185	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-12985	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-13073	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-28453	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	53834	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	86119	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	98584	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.559168	CTCF.p2:-3:0.559
chr19	5031716	5031852	reg1009043.p1	11.185	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-62611	+	NM_015015 TSC_hg19_v1_chr19_+_4969124	-62660	+	TSC_hg19_v1_chr19_-_4916833 AK097879	-114956	-	TSC_hg19_v1_chr19_+_5032899 CU687848	1115	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	309010	-	AK098722 NM_181710 AK292251 BC017592	423642	+	AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##NM_015015|KDM4B|23030|lysine (K)-specific demethylase 4B##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4	0.970109	CTCF.p2:11:0.970
chr1	161067538	161067697	reg1004958.p2	11.183	+	TSC_hg19_v1_chr1_-_161059357 NM_030916	-8249	-	AF426163 CU679709 DQ893504 DQ896483 AF160477 TSC_hg19_v1_chr1_-_161059349 BC010423 AK027753	-8399	-	TSC_hg19_v1_chr1_-_161039761 AK126116 AK126163 NM_001025598 NM_181720	-27858	-	TSC_hg19_v1_chr1_+_161068152 BC032482 NM_001007255 NM_152366 AY601914 BC022077 BC066896 AK093268 AX748022	553	+	AB464064 CU680334 AF151065 AF117237 TSC_hg19_v1_chr1_-_161087828 BC047042 AF165883 AK024531 BC012464 AK315736	20208	-	TSC_hg19_v1_chr1_-_161087839 NM_012394	20235	-	NM_030916|PVRL4|81607|poliovirus receptor-related 4##AF426163|PVRL4|81607|poliovirus receptor-related 4##DQ893504|PVRL4|81607|poliovirus receptor-related 4##DQ896483|PVRL4|81607|poliovirus receptor-related 4##AF160477|PVRL4|81607|poliovirus receptor-related 4##BC010423|PVRL4|81607|poliovirus receptor-related 4##AK027753|PVRL4|81607|poliovirus receptor-related 4##AK126116|ARHGAP30|257106|Rho GTPase activating protein 30##AK126163|ARHGAP30|257106|Rho GTPase activating protein 30##NM_001025598|ARHGAP30|257106|Rho GTPase activating protein 30##NM_181720|ARHGAP30|257106|Rho GTPase activating protein 30##BC032482|KLHDC9|126823|kelch domain containing 9##NM_001007255|KLHDC9|126823|kelch domain containing 9##NM_152366|KLHDC9|126823|kelch domain containing 9##AY601914|KLHDC9|126823|kelch domain containing 9##BC022077|KLHDC9|126823|kelch domain containing 9##BC066896|KLHDC9|126823|kelch domain containing 9##AK093268|KLHDC9|126823|kelch domain containing 9##AF151065|PFDN2|5202|prefoldin subunit 2##AF117237|PFDN2|5202|prefoldin subunit 2##BC047042|PFDN2|5202|prefoldin subunit 2##AF165883|PFDN2|5202|prefoldin subunit 2##AK024531|PFDN2|5202|prefoldin subunit 2##BC012464|PFDN2|5202|prefoldin subunit 2##AK315736|PFDN2|5202|prefoldin subunit 2##NM_012394|PFDN2|5202|prefoldin subunit 2	0.998858	CTCF.p2:-20:0.999
chr1	207672979	207673090	reg1007034.p2	11.183	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	-3456	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-45373	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-177929	+	NM_175710 BC109190 BC109191	145453	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	252359	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	252449	+	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein	0.668213	CTCF.p2:5:0.668
chr15	90100037	90100140	reg1007850.p1	11.183	+	CU689056 AY257182 AF193809 NM_016321 BC015461 AK298252 AK298641 AF081497 AK301640 AK313238 BC030965 AK290899 AK310222	-60293	-	TSC_hg19_v1_chr15_-_89878042 AK291281	-222045	-	BC050559 BC042571 NM_001126131 NM_002693 X98093 TSC_hg19_v1_chr15_-_89878036	-222067	-	TSC_hg19_v1_chr15_+_90118742 GQ227787 NM_152259	18690	+	TSC_hg19_v1_chr15_-_90198681 BC042063 NM_198525	98532	-	TSC_hg19_v1_chr15_-_90222599 AB005293 BC031084 AK310907 NM_001145311 NM_002666	122521	-	AY257182|RHCG|51458|Rh family, C glycoprotein##AF193809|RHCG|51458|Rh family, C glycoprotein##NM_016321|RHCG|51458|Rh family, C glycoprotein##BC015461|RHCG|51458|Rh family, C glycoprotein##AK298252|RHCG|51458|Rh family, C glycoprotein##AK298641|RHCG|51458|Rh family, C glycoprotein##AF081497|RHCG|51458|Rh family, C glycoprotein##AK301640|RHCG|51458|Rh family, C glycoprotein##AK313238|RHCG|51458|Rh family, C glycoprotein##BC030965|RHCG|51458|Rh family, C glycoprotein##AK290899|RHCG|51458|Rh family, C glycoprotein##AK310222|RHCG|51458|Rh family, C glycoprotein##AK291281|POLG|5428|polymerase (DNA directed), gamma##BC050559|POLG|5428|polymerase (DNA directed), gamma##BC042571|POLG|5428|polymerase (DNA directed), gamma##NM_001126131|POLG|5428|polymerase (DNA directed), gamma##NM_002693|POLG|5428|polymerase (DNA directed), gamma##X98093|POLG|5428|polymerase (DNA directed), gamma##GQ227787|C15orf42|90381|chromosome 15 open reading frame 42##NM_152259|C15orf42|90381|chromosome 15 open reading frame 42##BC042063|KIF7|374654|kinesin family member 7##NM_198525|KIF7|374654|kinesin family member 7##AB005293|PLIN1|5346|perilipin 1##BC031084|PLIN1|5346|perilipin 1##NM_001145311|PLIN1|5346|perilipin 1##NM_002666|PLIN1|5346|perilipin 1	0.999789	CTCF.p2:0:1.000
chr16	66988117	66988256	reg1011130.p1	11.183	+	AM392781 AB527125 DQ893022 DQ896756 BC098417 BC071874 TSC_hg19_v1_chr16_+_66969468 AK222724 Y09616 D50579 U60553	-18731	+	TSC_hg19_v1_chr16_+_66968390 AL713761	-19793	+	TSC_hg19_v1_chr16_+_66968388 AK095522	-19809	+	TSC_hg19_v1_chr16_+_66995159 AK097538 NM_001185177 NM_024922 BC053670 AK000105 AY358609	6966	+	AK025389 NM_001185176	13191	+	AK293061 NM_173815 AK296064	34343	+	AM392781|CES2|8824|carboxylesterase 2##DQ893022|CES2|8824|carboxylesterase 2##DQ896756|CES2|8824|carboxylesterase 2##BC098417|CES2|8824|carboxylesterase 2##BC071874|CES2|8824|carboxylesterase 2##AK222724|CES2|8824|carboxylesterase 2##Y09616|CES2|8824|carboxylesterase 2##D50579|CES2|8824|carboxylesterase 2##U60553|CES2|8824|carboxylesterase 2##AL713761|CES2|8824|carboxylesterase 2##AK095522|CES2|8824|carboxylesterase 2##AK097538|CES3|23491|carboxylesterase 3##NM_001185177|CES3|23491|carboxylesterase 3##NM_024922|CES3|23491|carboxylesterase 3##BC053670|CES3|23491|carboxylesterase 3##AK000105|CES3|23491|carboxylesterase 3##AY358609|CES3|23491|carboxylesterase 3##AK025389|CES3|23491|carboxylesterase 3##NM_001185176|CES3|23491|carboxylesterase 3##AK293061|CES4A|283848|carboxylesterase 4A##NM_173815|CES4A|283848|carboxylesterase 4A##AK296064|CES4A|283848|carboxylesterase 4A	0.998316	CTCF.p2:-16:0.998
chr9	101610965	101611083	reg1008705.p1	11.183	+	TSC_hg19_v1_chr9_+_101569953 AB527376 AB040673 AB078146 AJ132365 NM_024642	-41034	+	CR749467 TSC_hg19_v1_chr9_-_101558801 NM_173551	-52373	-	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	-139839	-	TSC_hg19_v1_chr9_+_101706027 AK308438 NM_001855 AK095885 L25286 D21230	94959	+	TSC_hg19_v1_chr9_+_101867370 AK302059	256347	+	BC071181 TSC_hg19_v1_chr9_+_101867394	256369	+	AB040673|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AB078146|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AJ132365|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##NM_024642|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##CR749467|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##NM_173551|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AK308438|COL15A1|1306|collagen, type XV, alpha 1##NM_001855|COL15A1|1306|collagen, type XV, alpha 1##AK095885|COL15A1|1306|collagen, type XV, alpha 1##L25286|COL15A1|1306|collagen, type XV, alpha 1##D21230|COL15A1|1306|collagen, type XV, alpha 1##AK302059|TGFBR1|7046|transforming growth factor, beta receptor 1##BC071181|TGFBR1|7046|transforming growth factor, beta receptor 1	0.999745	CTCF.p2:-13:1.000
chr15	55818803	55818913	reg1009230.p1	11.182	+	AF337549 NM_001033559 NM_001033560 NM_130810	-18427	-	NM_001198784 AK130862 BX648577	-118063	+	AK292795 BC039871 TSC_hg19_v1_chr15_-_55700478 BC027621 AB033080 AK022459 BC015203 NM_004748 NM_001204450 NM_001204451 NM_020739	-118277	-	EF625686 TSC_hg19_v1_chr15_-_55880544	61674	-	AF457207 NM_015617	62191	-	AY630258 NM_173814 TSC_hg19_v1_chr15_-_56035276	216368	-	AF337549|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001033559|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001033560|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_130810|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001198784|FLJ27352|145788|uncharacterized LOC145788##AK130862|FLJ27352|145788|uncharacterized LOC145788##BX648577|FLJ27352|145788|uncharacterized LOC145788##AK292795|CCPG1|9236|cell cycle progression 1##BC039871|CCPG1|9236|cell cycle progression 1##BC027621|CCPG1|9236|cell cycle progression 1##AB033080|CCPG1|9236|cell cycle progression 1##AK022459|CCPG1|9236|cell cycle progression 1##BC015203|CCPG1|9236|cell cycle progression 1##NM_004748|CCPG1|9236|cell cycle progression 1##NM_001204450|CCPG1|9236|cell cycle progression 1##NM_001204451|CCPG1|9236|cell cycle progression 1##NM_020739|CCPG1|9236|cell cycle progression 1##EF625686|PYGO1|26108|pygopus homolog 1 (Drosophila)##AF457207|PYGO1|26108|pygopus homolog 1 (Drosophila)##NM_015617|PYGO1|26108|pygopus homolog 1 (Drosophila)##AY630258|PRTG|283659|protogenin##NM_173814|PRTG|283659|protogenin	0.993926	CTCF.p2:-14:0.994
chr1	110182967	110183077	reg1008835.p1	11.181	+	NM_203404 S47833	-14974	+	TSC_hg19_v1_chr1_+_110163724 AK302939	-19301	+	NM_004037 U16268	-19747	+	AK291880 NM_000850 NM_147148 TSC_hg19_v1_chr1_+_110198723	15688	+	TSC_hg19_v1_chr1_+_110198727 DQ062813 AK311000 BC015513 M99422 M96234 BC108729	15730	+	M99421 TSC_hg19_v1_chr1_+_110198960 AB590400 DQ890658 DQ890659 DQ893839 BT019947 CR541869 CU677329	15921	+	NM_203404|AMPD2|271|adenosine monophosphate deaminase 2##S47833|AMPD2|271|adenosine monophosphate deaminase 2##AK302939|AMPD2|271|adenosine monophosphate deaminase 2##NM_004037|AMPD2|271|adenosine monophosphate deaminase 2##U16268|AMPD2|271|adenosine monophosphate deaminase 2##AK291880|GSTM4|2948|glutathione S-transferase mu 4##NM_000850|GSTM4|2948|glutathione S-transferase mu 4##NM_147148|GSTM4|2948|glutathione S-transferase mu 4##DQ062813|GSTM4|2948|glutathione S-transferase mu 4##BC015513|GSTM4|2948|glutathione S-transferase mu 4##M99422|GSTM4|2948|glutathione S-transferase mu 4##M96234|GSTM4|2948|glutathione S-transferase mu 4##BC108729|GSTM4|2948|glutathione S-transferase mu 4##M99421|GSTM4|2948|glutathione S-transferase mu 4##DQ890658|GSTM4|2948|glutathione S-transferase mu 4##DQ890659|GSTM4|2948|glutathione S-transferase mu 4##DQ893839|GSTM4|2948|glutathione S-transferase mu 4##BT019947|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##CR541869|GSTM4|2948|glutathione S-transferase mu 4	0.866351	CTCF.p2:8:0.866
chr1	206899764	206899872	reg1006548.p2	11.181	+	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-41347	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-90708	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	-90974	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	46061	-	AY040367 NM_153758 AB463800	72408	+	AF453946 NM_013371	102403	+	BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19	0.999699	CTCF.p2:-11:1.000
chr1	38325861	38326016	reg1010268.p1	11.181	+	TSC_hg19_v1_chr1_-_38325265 X78710 AK225923 AK298751 AK309584 AK314233 BC014454 NM_005955	-680	-	AY517499 TSC_hg19_v1_chr1_+_38273967 BC107856 BC057819 AK127381 BC102041 BC127187 BC127188 BC141938	-52028	+	TSC_hg19_v1_chr1_-_38273855 AY172561 NM_024640 BC080186	-52067	-	TSC_hg19_v1_chr1_-_38397424 AK022846	71497	-	TSC_hg19_v1_chr1_-_38412689 AL833055 BC058932	86744	-	TSC_hg19_v1_chr1_-_38412717 BC062317 AK310824	86773	-	X78710|MTF1|4520|metal-regulatory transcription factor 1##AK225923|MTF1|4520|metal-regulatory transcription factor 1##AK298751|MTF1|4520|metal-regulatory transcription factor 1##AK309584|MTF1|4520|metal-regulatory transcription factor 1##AK314233|MTF1|4520|metal-regulatory transcription factor 1##BC014454|MTF1|4520|metal-regulatory transcription factor 1##NM_005955|MTF1|4520|metal-regulatory transcription factor 1##AY517499|C1orf122|127687|chromosome 1 open reading frame 122##BC107856|C1orf122|127687|chromosome 1 open reading frame 122##BC057819|C1orf122|127687|chromosome 1 open reading frame 122##AK127381|C1orf122|127687|chromosome 1 open reading frame 122##BC102041|C1orf122|127687|chromosome 1 open reading frame 122##BC127187|C1orf122|127687|chromosome 1 open reading frame 122##BC127188|C1orf122|127687|chromosome 1 open reading frame 122##AY172561|YRDC|79693|yrdC domain containing (E. coli)##NM_024640|YRDC|79693|yrdC domain containing (E. coli)##BC080186|YRDC|79693|yrdC domain containing (E. coli)##AK022846|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##AL833055|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##BC058932|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##BC062317|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##AK310824|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa	0.998077	CTCF.p2:11:0.998
chr3	93560631	93560760	reg1008652.p1	11.181	+	M83941 AF213460 BC026247 TSC_hg19_v1_chr3_+_89156840 AK291411 AB384708	-4403845	+	AF213459 NM_005233 NM_182644 BC063282 TSC_hg19_v1_chr3_+_89156770	-4403974	+	AL832398 NM_173824 TSC_hg19_v1_chr3_+_88199126 BC024188 AK297719 AK313547	-5361667	+	AB590252 DQ892389 DQ895602 TSC_hg19_v1_chr3_-_93692741 Y00692 AK292994	131981	-	TSC_hg19_v1_chr3_-_93692932 BC015801 NM_000313	132223	-	TSC_hg19_v1_chr3_+_93698998 BC073842 NM_001174150 NM_001174151 NM_144996 NM_182896 CR936753 BC094725 BC104033 BC104034 BC104035 BC104036 AK299284 BC031093 AK296994 BC062993 BC015439 CR936763 AL713789 CR936756	138332	+	M83941|EPHA3|2042|EPH receptor A3##AF213460|EPHA3|2042|EPH receptor A3##BC026247|EPHA3|2042|EPH receptor A3##AK291411|EPHA3|2042|EPH receptor A3##AF213459|EPHA3|2042|EPH receptor A3##NM_005233|EPHA3|2042|EPH receptor A3##NM_182644|EPHA3|2042|EPH receptor A3##BC063282|EPHA3|2042|EPH receptor A3##AL832398|C3orf38|285237|chromosome 3 open reading frame 38##NM_173824|C3orf38|285237|chromosome 3 open reading frame 38##BC024188|C3orf38|285237|chromosome 3 open reading frame 38##AK297719|C3orf38|285237|chromosome 3 open reading frame 38##AK313547|C3orf38|285237|chromosome 3 open reading frame 38##DQ892389|PROS1|5627|protein S (alpha)##DQ895602|PROS1|5627|protein S (alpha)##Y00692|PROS1|5627|protein S (alpha)##AK292994|PROS1|5627|protein S (alpha)##BC015801|PROS1|5627|protein S (alpha)##NM_000313|PROS1|5627|protein S (alpha)##BC073842|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174150|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174151|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_144996|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_182896|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936753|ARL13B|200894|ADP-ribosylation factor-like 13B##BC094725|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104033|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104034|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104035|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104036|ARL13B|200894|ADP-ribosylation factor-like 13B##AK299284|ARL13B|200894|ADP-ribosylation factor-like 13B##BC031093|ARL13B|200894|ADP-ribosylation factor-like 13B##AK296994|ARL13B|200894|ADP-ribosylation factor-like 13B##BC062993|ARL13B|200894|ADP-ribosylation factor-like 13B##BC015439|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936763|ARL13B|200894|ADP-ribosylation factor-like 13B##AL713789|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936756|ARL13B|200894|ADP-ribosylation factor-like 13B	0.785322	CTCF.p2:10:0.785
chr3	50557074	50557169	reg1006957.p1	11.180	+	AJ251367 AJ251368 AB011130 BC152438 AB383908 NM_001005505 NM_001174051 NM_006030 AF040709 AF042792 AK310138 TSC_hg19_v1_chr3_-_50541066	-16161	-	TSC_hg19_v1_chr3_-_50396943 NM_007024 AK314166	-160183	-	BC017367 TSC_hg19_v1_chr3_-_50396920 BC011948	-160211	-	AK124438 AK311093 TSC_hg19_v1_chr3_-_50605192 BC034766 AK313128 AK308074 AK309486 AL833938 AK130227 NM_001171740 NM_001171743 NM_016210	48022	-	TSC_hg19_v1_chr3_+_50606919 BX537562 NM_016173 AK314023 AF172244 AK124369	49827	+	AF188706 NM_001171741	51318	-	AJ251367|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AJ251368|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AB011130|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##BC152438|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_001005505|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_001174051|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_006030|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AF040709|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AF042792|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AK310138|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_007024|TMEM115|11070|transmembrane protein 115##AK314166|TMEM115|11070|transmembrane protein 115##BC017367|TMEM115|11070|transmembrane protein 115##BC011948|TMEM115|11070|transmembrane protein 115##AK124438|C3orf18|51161|chromosome 3 open reading frame 18##AK311093|C3orf18|51161|chromosome 3 open reading frame 18##BC034766|C3orf18|51161|chromosome 3 open reading frame 18##AK313128|C3orf18|51161|chromosome 3 open reading frame 18##AK308074|C3orf18|51161|chromosome 3 open reading frame 18##AK309486|C3orf18|51161|chromosome 3 open reading frame 18##AL833938|C3orf18|51161|chromosome 3 open reading frame 18##AK130227|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171740|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171743|C3orf18|51161|chromosome 3 open reading frame 18##NM_016210|C3orf18|51161|chromosome 3 open reading frame 18##BX537562|HEMK1|51409|HemK methyltransferase family member 1##NM_016173|HEMK1|51409|HemK methyltransferase family member 1##AK314023|HEMK1|51409|HemK methyltransferase family member 1##AF172244|HEMK1|51409|HemK methyltransferase family member 1##AK124369|HEMK1|51409|HemK methyltransferase family member 1##AF188706|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171741|C3orf18|51161|chromosome 3 open reading frame 18	0.999691	CTCF.p2:-13:1.000
chr8	145056723	145056863	reg1009891.p1	11.180	+	TSC_hg19_v1_chr8_-_145050917 U53204 NM_000445	-5866	-	AY480045 NM_201378 TSC_hg19_v1_chr8_-_145047698	-9124	-	TSC_hg19_v1_chr8_-_145028003 AY480046 NM_201379	-28762	-	AK303317 TSC_hg19_v1_chr8_-_145060590 AK128537 BC132961 BC136542 BC144235	3784	-	AK027370 TSC_hg19_v1_chr8_-_145060609 AK309251 BC030549 BC020378 AK222914 AK308657 NM_032789	3821	-	BC035485 TSC_hg19_v1_chr8_-_145064214	7382	-	U53204|PLEC|5339|plectin##NM_000445|PLEC|5339|plectin##AY480045|PLEC|5339|plectin##NM_201378|PLEC|5339|plectin##AY480046|PLEC|5339|plectin##NM_201379|PLEC|5339|plectin##AK303317|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK128537|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC132961|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC136542|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC144235|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK027370|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK309251|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC030549|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC020378|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK222914|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK308657|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##NM_032789|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC035485|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	0.993605	CTCF.p2:-13:0.994
chr14	91369506	91369622	reg1007135.p1	11.179	+	NM_001010854 TSC_hg19_v1_chr14_-_91282765	-86799	-	AB527232 TSC_hg19_v1_chr14_-_91282750	-86866	-	TSC_hg19_v1_chr14_+_90863372 BC011834 BC047523 U16851 BC000454 BC008597 AK289937 M27319	-506137	+	TSC_hg19_v1_chr14_-_91526731 CU677851	157190	-	TSC_hg19_v1_chr14_-_91526968 AF090421 AF074393 AF080000 BC017187 AK309925 NM_004755 NM_182398	157406	-	NM_001102366 NM_001102368 NM_001102369 NM_024952 TSC_hg19_v1_chr14_+_91580416 AK097294 AK098752 BX537970 BX161393 BX247989 BC009182 AK308857 AB210031	210841	+	NM_001010854|TTC7B|145567|tetratricopeptide repeat domain 7B##BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AF090421|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##AF074393|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##AF080000|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##BC017187|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##AK309925|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##NM_004755|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##NM_182398|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159##NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159##NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159##NM_024952|C14orf159|80017|chromosome 14 open reading frame 159##AK097294|C14orf159|80017|chromosome 14 open reading frame 159##AK098752|C14orf159|80017|chromosome 14 open reading frame 159##BX537970|C14orf159|80017|chromosome 14 open reading frame 159##BX161393|C14orf159|80017|chromosome 14 open reading frame 159##BX247989|C14orf159|80017|chromosome 14 open reading frame 159##BC009182|C14orf159|80017|chromosome 14 open reading frame 159##AK308857|C14orf159|80017|chromosome 14 open reading frame 159##AB210031|C14orf159|80017|chromosome 14 open reading frame 159	0.911238	CTCF.p2:-10:0.911
chr2	213727992	213728138	reg1009446.p1	11.179	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	-324750	-	AK316425 NM_001122634 AK302778 AY317138	-2269980	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-2306676	+	AK301503 AF130863 NM_016260	286990	-	BC028936 NM_001079526	288267	-	AK124960 NM_001242575	420863	-	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451	0.501969	CTCF.p2:-11:0.502
chr2	166257937	166258053	reg1009856.p1	11.178	+	NM_001040143	-105713	+	NM_021007	-107655	+	AK289656 NM_001040142 DQ993531 BC029489 BC047398 BC048417	-162063	+	AK126129 NM_001172173 TSC_hg19_v1_chr2_+_166326207	68189	+	NM_024969 AK056655 TSC_hg19_v1_chr2_+_166428851	170854	+	AK313389 TSC_hg19_v1_chr2_-_166650651	392610	-	NM_001040143|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_021007|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##AK313389|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)	0.988523	CTCF.p2:-4:0.989
chr11	125812064	125812189	reg1010777.p1	11.176	+	NM_013264 BC031098 BC050360 AK312772 TSC_hg19_v1_chr11_+_125774406 AK295121 BC035388	-37784	+	TSC_hg19_v1_chr11_-_125773094 AK055702 BC004822 AK314251 NM_031307	-39015	-	TSC_hg19_v1_chr11_+_125757594 BC015047	-54513	+	BC098583 NM_001243597 NM_016952	121060	-	CU680792 TSC_hg19_v1_chr11_-_126081542 AK027400 AK308059 AK225320 BC014131 NM_001144827 NM_032795	269433	-	NM_024556 TSC_hg19_v1_chr11_+_126081676 AK315615 AK024756 AK225081 BC001647	269536	+	NM_013264|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##BC031098|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##BC050360|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##AK312772|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##AK295121|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##BC035388|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##AK055702|PUS3|83480|pseudouridylate synthase 3##BC004822|PUS3|83480|pseudouridylate synthase 3##AK314251|PUS3|83480|pseudouridylate synthase 3##NM_031307|PUS3|83480|pseudouridylate synthase 3##BC015047|HYLS1|219844|hydrolethalus syndrome 1##BC098583|CDON|50937|Cdon homolog (mouse)##NM_001243597|CDON|50937|Cdon homolog (mouse)##NM_016952|CDON|50937|Cdon homolog (mouse)##AK027400|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##AK308059|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##AK225320|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##BC014131|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##NM_001144827|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##NM_032795|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##NM_024556|FAM118B|79607|family with sequence similarity 118, member B##AK315615|FAM118B|79607|family with sequence similarity 118, member B##AK024756|FAM118B|79607|family with sequence similarity 118, member B##AK225081|FAM118B|79607|family with sequence similarity 118, member B##BC001647|FAM118B|79607|family with sequence similarity 118, member B	0.985906	CTCF.p2:-9:0.986
chr19	16152465	16152598	reg1009726.p1	11.176	+	BC031284 TSC_hg19_v1_chr19_+_16145007	-7563	+	NM_001004465	-92714	+	TSC_hg19_v1_chr19_-_16045678 BC016853 NM_001128932 NM_021187	-106858	-	TSC_hg19_v1_chr19_+_16178347 NM_001145160 AK023385	25729	+	TSC_hg19_v1_chr19_+_16187132 NM_003290	34569	+	TSC_hg19_v1_chr19_+_16187304 BC037576 AK300136 AK307538 AK301285	34754	+	BC031284|FLJ25328|148231|uncharacterized LOC148231##NM_001004465|OR10H4|126541|olfactory receptor, family 10, subfamily H, member 4##BC016853|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_001128932|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_021187|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_001145160|TPM4|7171|tropomyosin 4##AK023385|TPM4|7171|tropomyosin 4##NM_003290|TPM4|7171|tropomyosin 4##BC037576|TPM4|7171|tropomyosin 4##AK300136|TPM4|7171|tropomyosin 4##AK307538|TPM4|7171|tropomyosin 4##AK301285|TPM4|7171|tropomyosin 4	0.145862	
chr3	150505684	150505821	reg1010822.p1	11.176	+	TSC_hg19_v1_chr3_-_150481278 U76248 NM_005067	-24630	-	TSC_hg19_v1_chr3_-_150480936 BC013082	-24822	-	TSC_hg19_v1_chr3_-_150480902 AK223565	-24853	-	AF388366 AF388368 NM_052995	156270	-	AF482697 NM_001195794 NM_174878	185033	-	TSC_hg19_v1_chr3_+_150803504 AK128165	297753	+	U76248|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##NM_005067|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##BC013082|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##AK223565|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##AF388366|CLRN1|7401|clarin 1##AF388368|CLRN1|7401|clarin 1##NM_052995|CLRN1|7401|clarin 1##AF482697|CLRN1|7401|clarin 1##NM_001195794|CLRN1|7401|clarin 1##NM_174878|CLRN1|7401|clarin 1##AK128165|MED12L|116931|mediator complex subunit 12-like	0.745634	CTCF.p2:-8:0.746
chr7	90258760	90258880	reg1008926.p1	11.176	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	-33011	+	TSC_hg19_v1_chr7_+_90032774 AL136770 BC016061	-226016	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	-226116	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	79963	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	80340	+	BC017719 TSC_hg19_v1_chr7_+_90893724	634881	+	AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##AL136770|CLDN12|9069|claudin 12##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14##BC017719|FZD1|8321|frizzled family receptor 1	0.552738	CTCF.p2:7:0.553
chr18	12092866	12092985	reg1009782.p1	11.175	+	TSC_hg19_v1_chr18_+_11981575 BC017176 AF200432 BT007061	-111315	+	TSC_hg19_v1_chr18_+_11981502 BC031560	-111426	+	TSC_hg19_v1_chr18_+_11981424 AF014398 NM_014214	-111496	+	NM_001279 AK122762 AF041378 AY364639	161424	+	TSC_hg19_v1_chr18_+_12308239 AK001295 AK092677 AK311364	215313	+	TSC_hg19_v1_chr18_+_12308246 AK022340 AK098440 AK304616 BC002654 NM_032525 AK298196 BC039717 AB590145 DQ893486 DQ896394	215340	+	BC017176|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##AF200432|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BT007061|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BC031560|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##AF014398|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##NM_014214|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##NM_001279|CIDEA|1149|cell death-inducing DFFA-like effector a##AK122762|CIDEA|1149|cell death-inducing DFFA-like effector a##AF041378|CIDEA|1149|cell death-inducing DFFA-like effector a##AY364639|CIDEA|1149|cell death-inducing DFFA-like effector a##AK001295|TUBB6|84617|tubulin, beta 6 class V##AK092677|TUBB6|84617|tubulin, beta 6 class V##AK311364|TUBB6|84617|tubulin, beta 6 class V##AK022340|TUBB6|84617|tubulin, beta 6 class V##AK098440|TUBB6|84617|tubulin, beta 6 class V##AK304616|TUBB6|84617|tubulin, beta 6 class V##BC002654|TUBB6|84617|tubulin, beta 6 class V##NM_032525|TUBB6|84617|tubulin, beta 6 class V##AK298196|TUBB6|84617|tubulin, beta 6 class V##DQ893486|TUBB6|84617|tubulin, beta 6 class V##DQ896394|TUBB6|84617|tubulin, beta 6 class V	0.939307	CTCF.p2:-13:0.939
chr2	32997828	32997971	reg1010863.p1	11.175	+	NM_001193509 NM_017735 AK299196 BC063791 TSC_hg19_v1_chr2_+_32853177 AK027570	-144765	+	TSC_hg19_v1_chr2_+_32582308 AF265555	-415589	+	TSC_hg19_v1_chr2_+_32582131 NM_016252	-415786	+	NM_206943	174469	+	TSC_hg19_v1_chr2_+_33359657 NM_000627 NM_001166264 NM_001166265 NM_001166266 AB208801 BC130289 BC144127 BC144128 M34057 AB384737 AF489528	361806	+	AK125551 TSC_hg19_v1_chr2_+_33661417 BC027849 NM_170672 AK292983	663549	+	NM_001193509|TTC27|55622|tetratricopeptide repeat domain 27##NM_017735|TTC27|55622|tetratricopeptide repeat domain 27##AK299196|TTC27|55622|tetratricopeptide repeat domain 27##BC063791|TTC27|55622|tetratricopeptide repeat domain 27##AK027570|TTC27|55622|tetratricopeptide repeat domain 27##AF265555|BIRC6|57448|baculoviral IAP repeat containing 6##NM_016252|BIRC6|57448|baculoviral IAP repeat containing 6##NM_206943|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1##AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1##M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1##AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1##AK125551|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC027849|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_170672|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK292983|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)	0.982266	CTCF.p2:-28:0.982
chr8	18769832	18769952	reg1008270.p1	11.175	+	AB463178 BC045112 AB023159 NM_206909	-103543	-	EU832144 EU832237 AK296546 BX647320 BX647406 TSC_hg19_v1_chr8_-_18541614	-228360	-	D90042 NM_000015 BC067218 BC015878 D90040 AJ581144	-521104	+	GU727648 TSC_hg19_v1_chr8_-_18871128	101220	-	TSC_hg19_v1_chr8_-_18871214 AK091317 AX746913 NM_015310	101394	-	TSC_hg19_v1_chr8_+_19171505 NM_001174160 NM_022071 AK024799 AK293301 BC082982 NM_001174159	401391	+	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3##AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3##EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3##EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3##AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3##D90042|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##NM_000015|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC067218|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC015878|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##D90040|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##AJ581144|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3##AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_001174160|SH2D4A|63898|SH2 domain containing 4A##NM_022071|SH2D4A|63898|SH2 domain containing 4A##AK024799|SH2D4A|63898|SH2 domain containing 4A##AK293301|SH2D4A|63898|SH2 domain containing 4A##BC082982|SH2D4A|63898|SH2 domain containing 4A##NM_001174159|SH2D4A|63898|SH2 domain containing 4A	0.998828	CTCF.p2:5:0.999
chr9	129468864	129468981	reg1010069.p1	11.175	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	-92161	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-379755	+	AK309713 NM_001134778	-958445	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	98388	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	154022	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	208182	+	NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	0.0	
chr10	77159725	77159832	reg1010878.p1	11.174	+	TSC_hg19_v1_chr10_-_76995794 CU690500 BC023663 AK302283 AK074421 AY358476 BC047774 NM_144589 AK290452	-164007	-	BC012883 L08666 TSC_hg19_v1_chr10_+_76970608	-189168	+	TSC_hg19_v1_chr10_+_76970563 BC000165 BC072407 AK315919 AK296635	-189224	+	TSC_hg19_v1_chr10_-_77159861 AK092897 AX747796	167	-	AK127647 TSC_hg19_v1_chr10_-_77160688	892	-	TSC_hg19_v1_chr10_-_77161142 CU680472 EU446545 BC013011 BC021165	1432	-	BC023663|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK302283|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK074421|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AY358476|COMTD1|118881|catechol-O-methyltransferase domain containing 1##BC047774|COMTD1|118881|catechol-O-methyltransferase domain containing 1##NM_144589|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK290452|COMTD1|118881|catechol-O-methyltransferase domain containing 1##BC012883|VDAC2|7417|voltage-dependent anion channel 2##L08666|VDAC2|7417|voltage-dependent anion channel 2##BC000165|VDAC2|7417|voltage-dependent anion channel 2##BC072407|VDAC2|7417|voltage-dependent anion channel 2##AK315919|VDAC2|7417|voltage-dependent anion channel 2##AK296635|VDAC2|7417|voltage-dependent anion channel 2##AK092897|ZNF503|84858|zinc finger protein 503##AK127647|ZNF503|84858|zinc finger protein 503##EU446545|ZNF503|84858|zinc finger protein 503##BC013011|ZNF503|84858|zinc finger protein 503##BC021165|ZNF503|84858|zinc finger protein 503	0.560961	CTCF.p2:15:0.561
chr3	171490370	171490512	reg1010498.p1	11.173	+	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-312370	-	NM_000340	-745674	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-745908	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	37814	-	NM_001164436 AK026825	70707	+	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	266974	+	AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B	0.242825	CTCF.p2:-3:0.243
chr2	170681430	170681568	reg1009626.p1	11.172	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-114	-	TSC_hg19_v1_chr2_+_170662051 M20328 M35261	-19355	+	NM_003142 TSC_hg19_v1_chr2_+_170655388 BC020818 D28394 J04205 BC001289 DQ185046 X13697	-26083	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	2459	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	353186	+	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	890359	+	BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##M20328|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##M35261|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##NM_003142|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##BC020818|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##D28394|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##J04205|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##BC001289|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##DQ185046|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##X13697|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor	0.112089	
chr2	201766309	201766461	reg1009848.p1	11.172	+	AY251943 AY251944 BC007654 NM_001142356 CU675739 DQ896612 AB463931 AL834430	-9666	+	NM_001136039 NM_001142355 TSC_hg19_v1_chr2_+_201754095 AF060513 AF283538 AK314709 NM_021824 AK225905 AB038949 AK023378 AF182416	-12267	+	TSC_hg19_v1_chr2_-_201753860 AF146799 AK297804 AF271652 AF251049 NM_032472 NM_130906 AF414127 AK027315 AY257468 BC007693	-12498	-	TSC_hg19_v1_chr2_-_201828407 AK316433 U40268 U27459 BC014834 AK302614 NM_006190	61934	-	AL832234 TSC_hg19_v1_chr2_-_201936363	169973	-	TSC_hg19_v1_chr2_-_201936368 AL833403	169991	-	AY251943|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AY251944|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##BC007654|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_001142356|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##DQ896612|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AL834430|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_001136039|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_001142355|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF060513|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF283538|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AK314709|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_021824|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AK225905|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AB038949|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AK023378|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF182416|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF146799|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AK297804|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AF271652|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AF251049|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##NM_032472|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##NM_130906|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AF414127|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AY257468|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##BC007693|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AK316433|ORC2|4999|origin recognition complex, subunit 2##U40268|ORC2|4999|origin recognition complex, subunit 2##U27459|ORC2|4999|origin recognition complex, subunit 2##BC014834|ORC2|4999|origin recognition complex, subunit 2##AK302614|ORC2|4999|origin recognition complex, subunit 2##NM_006190|ORC2|4999|origin recognition complex, subunit 2##AL832234|FAM126B|285172|family with sequence similarity 126, member B##AL833403|FAM126B|285172|family with sequence similarity 126, member B	0.068853	
chr7	6566194	6566323	reg1011275.p1	11.172	+	DQ892879 DQ896128 CU675925 CU680460 CU687206 X63745 TSC_hg19_v1_chr7_-_6523784 BC008081 BC012994 BC071982 AK127440 AK315702 NM_001100603 NM_006854	-42490	-	TSC_hg19_v1_chr7_-_6487586 AK075128 AK074744 AF450090 NM_001142936 NM_139179	-78650	-	TSC_hg19_v1_chr7_-_6487567 BC027603 AK074584 AK093958 AK122748 AK301087 AK301104 AX748382 AK298955	-78719	-	NM_001145118	24808	-	TSC_hg19_v1_chr7_+_6617111 AK223532 NM_001134387 NM_001134388 NM_001134389 NM_018106 AK001341 AK308971 AL136674 BC001239 AY359090	50860	+	TSC_hg19_v1_chr7_+_6629662 BC001076 BC005121 AK056149 NM_024067	63528	+	DQ892879|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##DQ896128|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##X63745|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC008081|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC012994|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC071982|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##AK315702|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##NM_001100603|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##NM_006854|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##AK075128|DAGLB|221955|diacylglycerol lipase, beta##AK074744|DAGLB|221955|diacylglycerol lipase, beta##AF450090|DAGLB|221955|diacylglycerol lipase, beta##NM_001142936|DAGLB|221955|diacylglycerol lipase, beta##NM_139179|DAGLB|221955|diacylglycerol lipase, beta##BC027603|DAGLB|221955|diacylglycerol lipase, beta##AK074584|DAGLB|221955|diacylglycerol lipase, beta##AK093958|DAGLB|221955|diacylglycerol lipase, beta##AK122748|DAGLB|221955|diacylglycerol lipase, beta##AK301087|DAGLB|221955|diacylglycerol lipase, beta##AK301104|DAGLB|221955|diacylglycerol lipase, beta##AK298955|DAGLB|221955|diacylglycerol lipase, beta##NM_001145118|GRID2IP|392862|glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein##AK223532|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134387|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134388|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134389|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_018106|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK001341|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK308971|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AL136674|ZDHHC4|55146|zinc finger, DHHC-type containing 4##BC001239|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AY359090|ZDHHC4|55146|zinc finger, DHHC-type containing 4##BC001076|C7orf26|79034|chromosome 7 open reading frame 26##BC005121|C7orf26|79034|chromosome 7 open reading frame 26##AK056149|C7orf26|79034|chromosome 7 open reading frame 26##NM_024067|C7orf26|79034|chromosome 7 open reading frame 26	0.89325	CTCF.p2:0:0.893
chr8	65487739	65487867	reg1008757.p1	11.172	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-1406603	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-1406659	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-1489176	-	NM_152414 AK293979	5055	+	TSC_hg19_v1_chr8_+_65493611 AK091333	5861	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	223476	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.988767	CTCF.p2:-7:0.989
chr4	9705192	9705335	reg1010812.p1	11.171	+	AF529414 NM_001040448	-259004	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-340410	+	AF544012 BC100991 NM_001105662	-345155	+	NM_000798	77994	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	317861	-	AK310895 BC018897 NM_001001290 AK096819	336659	-	AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF544012|USP17|391627|ubiquitin specific peptidase 17##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_000798|DRD5|1816|dopamine receptor D5##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	1.009346	CTCF.p2:12:0.724	CTCF.p2:-25:0.285
chr10	103032125	103032224	reg1007870.p1	11.170	+	BC136321 BC069156 NM_006562 X90828	-43472	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-140996	+	BC019674 NM_001085398	-141272	-	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	81698	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	315755	-	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	315835	-	BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda	0.673014	CTCF.p2:1:0.673
chr17	61689706	61689824	reg1008357.p1	11.170	+	TSC_hg19_v1_chr17_+_61678277 BC007744 CU675789	-11406	+	TSC_hg19_v1_chr17_+_61678230 AK315375 NM_016360 AK094052 AX748431 BC005049	-11533	+	TSC_hg19_v1_chr17_+_61628000 DQ891233 DQ894417 AB590131	-61753	+	TSC_hg19_v1_chr17_+_61699772 AX775739 AX775741 AK315305	9981	+	TSC_hg19_v1_chr17_+_61699785 AK225784	10019	+	TSC_hg19_v1_chr17_+_61699786 BC090859 NM_002401 NM_203351 AL834303	10033	+	BC007744|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I##AK315375|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I##NM_016360|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I##AK094052|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I##BC005049|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I##DQ891233|DCAF7|10238|DDB1 and CUL4 associated factor 7##DQ894417|DCAF7|10238|DDB1 and CUL4 associated factor 7##AX775739|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AX775741|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AK315305|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AK225784|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##BC090859|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##NM_002401|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##NM_203351|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AL834303|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3	0.894689	CTCF.p2:16:0.895
chr3	59038658	59038793	reg1010772.p1	11.170	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-2965	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-2984	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-3017	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	2198365	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	2508486	+	BC047734 TSC_hg19_v1_chr3_+_61547294	2508561	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.018769	
chr22	51170688	51170818	reg1009385.p1	11.169	+	AB569469 NM_001080420	-57684	+	TSC_hg19_v1_chr22_-_51066581 AK092752 X52151 BX648618 BC014210 AK098659 AB448736 AK301098 AK315011 NM_000487 NM_001085425 NM_001085426 NM_001085427 NM_001085428	-104219	-	AF218778 NM_016431	-129192	+	AK310316 Y00970 NM_001097 CR456366 AB587466 CU012933 CU013221	5890	+	BC075856 TSC_hg19_v1_chr22_-_51222065 AF095352 BC024281 BC040495 BC014879 BC020495 AK308268 NM_001003789 NM_001130919 NM_001130920 NM_001130921 NM_001130922 NM_001130923 NM_007081 AK313442	51310	-	TSC_hg19_v1_chr22_+_51222212 AK293095 AL365511 BC019348 BC065556	51487	+	AB569469|SHANK3|85358|SH3 and multiple ankyrin repeat domains 3##NM_001080420|SHANK3|85358|SH3 and multiple ankyrin repeat domains 3##AK092752|ARSA|410|arylsulfatase A##X52151|ARSA|410|arylsulfatase A##BX648618|ARSA|410|arylsulfatase A##BC014210|ARSA|410|arylsulfatase A##AK098659|ARSA|410|arylsulfatase A##AB448736|ARSA|410|arylsulfatase A##AK301098|ARSA|410|arylsulfatase A##AK315011|ARSA|410|arylsulfatase A##NM_000487|ARSA|410|arylsulfatase A##NM_001085425|ARSA|410|arylsulfatase A##NM_001085426|ARSA|410|arylsulfatase A##NM_001085427|ARSA|410|arylsulfatase A##NM_001085428|ARSA|410|arylsulfatase A##AF218778|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##NM_016431|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AK310316|ACR|49|acrosin##Y00970|ACR|49|acrosin##NM_001097|ACR|49|acrosin##CR456366|ACR|49|acrosin##CU012933|ACR|49|acrosin##CU013221|ACR|49|acrosin##BC075856|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##AF095352|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##BC024281|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##BC040495|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##BC014879|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##BC020495|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##AK308268|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_001003789|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_001130919|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_001130920|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_001130921|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_001130922|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_001130923|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_007081|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##AK313442|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##AK293095|RPL23AP82|284942|ribosomal protein L23a pseudogene 82##AL365511|RPL23AP82|284942|ribosomal protein L23a pseudogene 82##BC019348|RPL23AP82|284942|ribosomal protein L23a pseudogene 82##BC065556|RPL23AP82|284942|ribosomal protein L23a pseudogene 82	0.98759	CTCF.p2:-17:0.988
chr4	114199610	114199714	reg1007706.p1	11.169	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	-228828	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-460361	+	NM_015454 TSC_hg19_v1_chr4_+_113558677	-640994	+	TSC_hg19_v1_chr4_+_114214102 AK294720	14457	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	482619	-	TSC_hg19_v1_chr4_-_114682341 AK294517	482694	-	NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7##AK294720|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK294517|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.994763	CTCF.p2:0:0.995
chr5	9362021	9362127	reg1007002.p1	11.169	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-1492764	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-1492815	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-1492942	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	184120	-	BC095521 NM_019599	268388	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	887910	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	1.00583	CTCF.p2:-24:0.994
chr9	136061528	136061658	reg1006125.p1	11.169	+	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	-22296	-	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	-36907	-	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	-65094	-	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	23027	-	AF134412 AF134413 AF134414 AF134415 AF134416 BC069595 BC069605 BC069814 BC111575 DQ139865 FR691751 FR691752 J05175 JN791441 CU686922 AK302203 TSC_hg19_v1_chr9_-_136150618	89021	-	NM_020469 TSC_hg19_v1_chr9_-_136150638	89044	-	AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B##AF134412|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134413|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134414|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134415|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134416|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069595|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069605|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069814|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC111575|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##DQ139865|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691751|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691752|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##J05175|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##JN791441|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AK302203|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##NM_020469|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)	0.89845	CTCF.p2:6:0.898
chr10	111644033	111644178	reg1010754.p1	11.168	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-2719729	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-3185046	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-5243060	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	39104	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	39172	-	NM_019903 AB209810 BC057285	121676	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.714682	CTCF.p2:-6:0.715
chr19	41632714	41632856	reg1010984.p1	11.168	+	AK296884 AK298082 AK316498 J02906 NM_000774 BC109057 BC109056	-12438	+	NM_000766 AB527127 AF209774 AY513604 AY513605 AY513606 AY513607 AY513608 AY513609	-38414	+	TSC_hg19_v1_chr19_+_41515553 X06399	-117247	+	TSC_hg19_v1_chr19_+_41699123 AK027605 NM_030622 AY358603	66319	+	TSC_hg19_v1_chr19_+_41699143 AK296087 BC033691 AF335278 CU689700 DQ893363 DQ896681	66378	+	TSC_hg19_v1_chr19_+_41725118 NM_001699 NM_021913	92326	+	AK298082|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##AK316498|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##J02906|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##NM_000774|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##BC109057|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##BC109056|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##NM_000766|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AF209774|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513604|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513605|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513606|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513607|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513608|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513609|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##X06399|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##AK027605|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##NM_030622|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AY358603|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AK296087|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##BC033691|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AF335278|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##DQ893363|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##DQ896681|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##NM_001699|AXL|558|AXL receptor tyrosine kinase##NM_021913|AXL|558|AXL receptor tyrosine kinase	0.731139	CTCF.p2:-25:0.731
chr3	4762482	4762612	reg1008505.p2	11.168	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-227351	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-227419	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-227516	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	258569	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	258634	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	258807	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.068528	
chr9	135128117	135128225	reg1008846.p1	11.168	+	AB058760 NM_032536 TSC_hg19_v1_chr9_+_135037469	-90768	+	TSC_hg19_v1_chr9_+_135037083 AY358165	-91080	+	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	-172921	-	TSC_hg19_v1_chr9_-_135230312 AK125448	102059	-	TSC_hg19_v1_chr9_-_135230352 AK307608 BX537849	102177	-	TSC_hg19_v1_chr9_-_135230374 BX538166 NM_015046	102236	-	AB058760|NTNG2|84628|netrin G2##NM_032536|NTNG2|84628|netrin G2##AY358165|NTNG2|84628|netrin G2##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AK125448|SETX|23064|senataxin##AK307608|SETX|23064|senataxin##BX537849|SETX|23064|senataxin##BX538166|SETX|23064|senataxin##NM_015046|SETX|23064|senataxin	0.830068	CTCF.p2:7:0.830
chr4	84174089	84174232	reg1011286.p1	11.167	+	TSC_hg19_v1_chr4_-_84035912 AK000140 NM_001130715 NM_016619	-138233	-	AF208846 EU570985 EU570986 TSC_hg19_v1_chr4_-_84035890 AJ422147	-138269	-	BC012205 NM_001130716	-143157	-	TSC_hg19_v1_chr4_-_84205924 DQ895928 EU176380 BC008804 AK023076	31755	-	TSC_hg19_v1_chr4_-_84205952 AK129583 AK300972 BC020728 AJ621061 NM_015697	31843	-	AJ627581 TSC_hg19_v1_chr4_-_84255962 AF084467 AM419200 AY948074 CU690802 AF152376 NM_001199830 AF165154 AK075400	81786	-	AK000140|PLAC8|51316|placenta-specific 8##NM_001130715|PLAC8|51316|placenta-specific 8##NM_016619|PLAC8|51316|placenta-specific 8##AF208846|PLAC8|51316|placenta-specific 8##EU570985|PLAC8|51316|placenta-specific 8##EU570986|PLAC8|51316|placenta-specific 8##AJ422147|PLAC8|51316|placenta-specific 8##BC012205|PLAC8|51316|placenta-specific 8##NM_001130716|PLAC8|51316|placenta-specific 8##DQ895928|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##EU176380|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC008804|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK023076|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK129583|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK300972|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC020728|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AJ621061|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##NM_015697|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AF084467|HPSE|10855|heparanase##AM419200|HPSE|10855|heparanase##AY948074|HPSE|10855|heparanase##AF152376|HPSE|10855|heparanase##NM_001199830|HPSE|10855|heparanase##AF165154|HPSE|10855|heparanase##AK075400|HPSE|10855|heparanase	0.968661	CTCF.p2:-2:0.969
chr15	48004005	48004124	reg1008185.p1	11.166	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	-527677	+	TSC_hg19_v1_chr15_+_45927245 AK222463 AF042284 NM_021199 AF151802 AK313111 BC016836	-2076815	+	TSC_hg19_v1_chr15_+_45879759 AK128626	-2124291	+	TSC_hg19_v1_chr15_+_48009541 AK290032	5524	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	6621	+	AF348468 NM_205850 BC110836 BC113628 BC113630 BC143950 DQ665306 DQ665307 HQ258279	409140	+	AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK222463|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF042284|SQRDL|58472|sulfide quinone reductase-like (yeast)##NM_021199|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF151802|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK313111|SQRDL|58472|sulfide quinone reductase-like (yeast)##BC016836|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK128626|PLDN|26258|pallidin homolog (mouse)##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF348468|SLC24A5|283652|solute carrier family 24, member 5##NM_205850|SLC24A5|283652|solute carrier family 24, member 5##BC113628|SLC24A5|283652|solute carrier family 24, member 5##BC113630|SLC24A5|283652|solute carrier family 24, member 5##BC143950|SLC24A5|283652|solute carrier family 24, member 5##DQ665306|SLC24A5|283652|solute carrier family 24, member 5##DQ665307|SLC24A5|283652|solute carrier family 24, member 5##HQ258279|SLC24A5|283652|solute carrier family 24, member 5	0.999524	CTCF.p2:-10:1.000
chr13	44479739	44479877	reg1007341.p1	11.165	+	AK096044 NM_153218 TSC_hg19_v1_chr13_+_44453986 BC035749	-25802	+	NM_144974 AK056408	-25983	-	NM_001128303	-26389	+	BC029067 NM_001010897 TSC_hg19_v1_chr13_+_44947983	468174	+	U35048 TSC_hg19_v1_chr13_-_45010962 AJ222700 BC105277 BC069207	531144	-	BC146664 BC146679 TSC_hg19_v1_chr13_-_45010983 BC000456 BC016867	531171	-	AK096044|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_153218|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC035749|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC029067|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##NM_001010897|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##U35048|TSC22D1|8848|TSC22 domain family, member 1##AJ222700|TSC22D1|8848|TSC22 domain family, member 1##BC105277|TSC22D1|8848|TSC22 domain family, member 1##BC069207|TSC22D1|8848|TSC22 domain family, member 1##BC146664|TSC22D1|8848|TSC22 domain family, member 1##BC146679|TSC22D1|8848|TSC22 domain family, member 1##BC000456|TSC22D1|8848|TSC22 domain family, member 1##BC016867|TSC22D1|8848|TSC22 domain family, member 1	0.96871	CTCF.p2:-38:0.969
chr19	14153974	14154097	reg1009143.p2	11.165	+	TSC_hg19_v1_chr19_+_14142622 BC028003 DQ891051 DQ894230 CU688366	-11388	+	AF265242 AY358876 TSC_hg19_v1_chr19_+_14142572	-11450	+	TSC_hg19_v1_chr19_+_14142542 AF053004 AF106912	-11521	+	NM_001145028	15935	-	TSC_hg19_v1_chr19_-_14201272 AY453840 NM_138352	47241	-	TSC_hg19_v1_chr19_-_14224999 AF208004 AF224718 NM_207518 AK292284 AF239744	71019	-	BC028003|IL27RA|9466|interleukin 27 receptor, alpha##DQ891051|IL27RA|9466|interleukin 27 receptor, alpha##DQ894230|IL27RA|9466|interleukin 27 receptor, alpha##AF265242|IL27RA|9466|interleukin 27 receptor, alpha##AY358876|IL27RA|9466|interleukin 27 receptor, alpha##AF053004|IL27RA|9466|interleukin 27 receptor, alpha##AF106912|IL27RA|9466|interleukin 27 receptor, alpha##NM_001145028|PALM3|342979|paralemmin 3##AY453840|SAMD1|90378|sterile alpha motif domain containing 1##NM_138352|SAMD1|90378|sterile alpha motif domain containing 1##AF208004|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF224718|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##NM_207518|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AK292284|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF239744|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha	0.987562	CTCF.p2:-18:0.988
chr10	100424339	100424466	reg1010747.p1	11.164	+	TSC_hg19_v1_chr10_-_100206705 NM_000195 NM_182639	-217691	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	-217727	-	BC002514 TSC_hg19_v1_chr10_-_100206650	-217756	-	AJ299720 AK094037 BC112356 AF282885 AF282886 AF282887 AJ299719 AK314759 NM_001166244 NM_001166245 NM_001166246 NM_021828	571192	-	TSC_hg19_v1_chr10_+_101088794 NM_020348	664422	+	TSC_hg19_v1_chr10_+_101089114 AK308618	664724	+	NM_000195|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_182639|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1##AJ299720|HPSE2|60495|heparanase 2##AK094037|HPSE2|60495|heparanase 2##BC112356|HPSE2|60495|heparanase 2##AF282885|HPSE2|60495|heparanase 2##AF282886|HPSE2|60495|heparanase 2##AF282887|HPSE2|60495|heparanase 2##AJ299719|HPSE2|60495|heparanase 2##AK314759|HPSE2|60495|heparanase 2##NM_001166244|HPSE2|60495|heparanase 2##NM_001166245|HPSE2|60495|heparanase 2##NM_001166246|HPSE2|60495|heparanase 2##NM_021828|HPSE2|60495|heparanase 2##NM_020348|CNNM1|26507|cyclin M1##AK308618|CNNM1|26507|cyclin M1	0.927632	CTCF.p2:4:0.928
chr10	113358377	113358490	reg1008297.p1	11.164	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	-521581	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-679053	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-679073	+	AB046780 TSC_hg19_v1_chr10_-_113933602	575128	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	585072	-	BC113497 BC113499 AF312827 HQ258194 NM_058222	685019	+	NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta	0.999475	CTCF.p2:-10:0.999
chr7	26409270	26409419	reg1008079.p1	11.164	+	AK309162 NM_001199838	-5400	+	NM_001199837 AK307905	-8816	+	TSC_hg19_v1_chr7_+_26331633 BC031050 AK312850 AK296142	-77697	+	TSC_hg19_v1_chr7_+_26438248 AK056484	28918	+	AK093321 AX748054 NM_001145531	268145	+	AF072166 AJ004886 AB528968 DQ892896 DQ896144 AB014486 TSC_hg19_v1_chr7_-_26904210 BC002893 AK222885 AK313209 BC036044 AF051323 NM_003930	494849	-	AK309162|SNX10|29887|sorting nexin 10##NM_001199838|SNX10|29887|sorting nexin 10##NM_001199837|SNX10|29887|sorting nexin 10##AK307905|SNX10|29887|sorting nexin 10##BC031050|SNX10|29887|sorting nexin 10##AK312850|SNX10|29887|sorting nexin 10##AK296142|SNX10|29887|sorting nexin 10##AK056484|LOC441204|441204|uncharacterized LOC441204##AK093321|C7orf71|285941|chromosome 7 open reading frame 71##NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71##AF072166|SKAP2|8935|src kinase associated phosphoprotein 2##AJ004886|SKAP2|8935|src kinase associated phosphoprotein 2##DQ892896|SKAP2|8935|src kinase associated phosphoprotein 2##DQ896144|SKAP2|8935|src kinase associated phosphoprotein 2##AB014486|SKAP2|8935|src kinase associated phosphoprotein 2##BC002893|SKAP2|8935|src kinase associated phosphoprotein 2##AK222885|SKAP2|8935|src kinase associated phosphoprotein 2##AK313209|SKAP2|8935|src kinase associated phosphoprotein 2##BC036044|SKAP2|8935|src kinase associated phosphoprotein 2##AF051323|SKAP2|8935|src kinase associated phosphoprotein 2##NM_003930|SKAP2|8935|src kinase associated phosphoprotein 2	0.998711	CTCF.p2:0:0.999
chr11	35637857	35638004	reg1010527.p1	11.163	+	AL832391 AK316188 TSC_hg19_v1_chr11_-_35547165 AY358346 AK027841 AK300185 BC089434 NM_001001991 NM_015430	-90771	-	S83375 U01824 TSC_hg19_v1_chr11_-_35441572 AK122843 NM_001195728 NM_001252652	-196375	-	TSC_hg19_v1_chr11_-_35441106 NM_004171	-196827	-	NM_014344 TSC_hg19_v1_chr11_+_35640006 AK315015 BC049171 BC071898 AJ245599	1964	+	TSC_hg19_v1_chr11_+_35684404 BC013166 NM_017583	46443	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	46520	+	AL832391|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##AK316188|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##AY358346|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##AK027841|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##AK300185|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##BC089434|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##NM_001001991|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##NM_015430|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_014344|FJX1|24147|four jointed box 1 (Drosophila)##AK315015|FJX1|24147|four jointed box 1 (Drosophila)##BC049171|FJX1|24147|four jointed box 1 (Drosophila)##BC071898|FJX1|24147|four jointed box 1 (Drosophila)##AJ245599|FJX1|24147|four jointed box 1 (Drosophila)##BC013166|TRIM44|54765|tripartite motif containing 44##NM_017583|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44	0.990502	CTCF.p2:-19:0.991
chr17	70536587	70536709	reg1008268.p2	11.163	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-419408	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-419478	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-419489	+	AK000477 TSC_hg19_v1_chr17_-_70588944	52295	-	AF331643 TSC_hg19_v1_chr17_-_71088816	552168	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	552175	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.98951	CTCF.p2:3:0.990
chr1	87299411	87299547	reg1008476.p2	11.163	+	TSC_hg19_v1_chr1_+_87170526 BC007455 AF151819 AF257318 AF263293 AB385341 DQ893029 DQ896273	-128925	+	TSC_hg19_v1_chr1_+_87170510 AF350371	-128980	+	TSC_hg19_v1_chr1_+_87170289 AK303710 AB007960 AK225864 AK001954	-129101	+	CU675093 AF051894 AF288991 TSC_hg19_v1_chr1_-_87379800 AK225252 AK225640 BC016359	80313	-	AL833575 TSC_hg19_v1_chr1_-_87379810 BC005294 BC021697	80342	-	TSC_hg19_v1_chr1_-_87380011 NM_004261 NM_203341	80578	-	BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF350371|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK303710|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AB007960|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK225864|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK001954|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF051894|SEP15|9403|15 kDa selenoprotein##AF288991|SEP15|9403|15 kDa selenoprotein##AK225252|SEP15|9403|15 kDa selenoprotein##AK225640|SEP15|9403|15 kDa selenoprotein##BC016359|SEP15|9403|15 kDa selenoprotein##AL833575|SEP15|9403|15 kDa selenoprotein##BC005294|SEP15|9403|15 kDa selenoprotein##BC021697|SEP15|9403|15 kDa selenoprotein##NM_004261|SEP15|9403|15 kDa selenoprotein##NM_203341|SEP15|9403|15 kDa selenoprotein	0.999935	CTCF.p2:-17:1.000
chr22	22511242	22511370	reg1007938.p1	11.163	+	TSC_hg19_v1_chr22_+_22385369 AF026922	-125941	+	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	-174120	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	-174159	-	X02422 TSC_hg19_v1_chr22_+_22550141	38823	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	38872	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	57958	+	AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57	0.935522	CTCF.p2:-12:0.936
chr7	100720993	100721111	reg1007904.p2	11.163	+	TSC_hg19_v1_chr7_+_100663360 AJ606307 AJ606308 NM_001040105	-57687	+	NM_001164462	-108149	+	AK130455 TSC_hg19_v1_chr7_+_100612694	-108359	+	BC005847 TSC_hg19_v1_chr7_+_100728767 AK092927 AX747810 BC048194 NM_030961 BC011882	7708	+	NM_000602 NM_001165413 TSC_hg19_v1_chr7_+_100770384 AK293248 AK297728 AK298048 AK316225 BC020765 X04729 BC010860 X04429 X12701 BC005927 M16006	49362	+	NM_001283 TSC_hg19_v1_chr7_+_100797756 AK312151 BC003561 AB015319	76676	+	AJ606307|MUC17|140453|mucin 17, cell surface associated##AJ606308|MUC17|140453|mucin 17, cell surface associated##NM_001040105|MUC17|140453|mucin 17, cell surface associated##NM_001164462|MUC12|10071|mucin 12, cell surface associated##BC005847|TRIM56|81844|tripartite motif containing 56##BC048194|TRIM56|81844|tripartite motif containing 56##NM_030961|TRIM56|81844|tripartite motif containing 56##BC011882|TRIM56|81844|tripartite motif containing 56##NM_000602|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001165413|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK293248|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK297728|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK298048|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK316225|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC020765|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04729|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC010860|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04429|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X12701|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC005927|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##M16006|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001283|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AK312151|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC003561|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AB015319|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit	0.915213	CTCF.p2:-1:0.915
chr8	117939559	117939684	reg1011295.p1	11.163	+	TSC_hg19_v1_chr8_-_117887068 NM_006265	-52539	-	AK289505 BC050381 TSC_hg19_v1_chr8_-_117887011 D38551	-52674	-	TSC_hg19_v1_chr8_+_117778793 AK055279 AK315770	-160827	+	BC140924 BC142621 NM_001025357 AB463771 AB181519	10838	+	EF560713 NM_001172811	22890	+	AK298294 NM_001172813 NM_001172815 AL713790	23582	+	NM_006265|RAD21|5885|RAD21 homolog (S. pombe)##AK289505|RAD21|5885|RAD21 homolog (S. pombe)##BC050381|RAD21|5885|RAD21 homolog (S. pombe)##D38551|RAD21|5885|RAD21 homolog (S. pombe)##AK055279|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##AK315770|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC140924|C8orf85|441376|chromosome 8 open reading frame 85##BC142621|C8orf85|441376|chromosome 8 open reading frame 85##NM_001025357|C8orf85|441376|chromosome 8 open reading frame 85##AB181519|C8orf85|441376|chromosome 8 open reading frame 85##EF560713|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172811|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	0.862007	CTCF.p2:0:0.862
chr3	159523067	159523176	reg1008902.p1	11.162	+	TSC_hg19_v1_chr3_+_159481881 AK309223	-41159	+	TSC_hg19_v1_chr3_+_158991090 AK314662	-532030	+	BC036535 NM_001197107 NM_001197108 NM_014575 TSC_hg19_v1_chr3_+_158991047	-532079	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	34572	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	34738	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	183611	+	AK309223|SCHIP1|29970|schwannomin interacting protein 1##AK314662|SCHIP1|29970|schwannomin interacting protein 1##BC036535|SCHIP1|29970|schwannomin interacting protein 1##NM_001197107|SCHIP1|29970|schwannomin interacting protein 1##NM_001197108|SCHIP1|29970|schwannomin interacting protein 1##NM_014575|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)	0.789818	CTCF.p2:3:0.790
chrX	37786092	37786235	reg1008830.p1	11.162	+	BC000968 TSC_hg19_v1_chrX_-_37706825 AK311851 U02556 NM_006520	-79311	-	CR450320 CR542213 TSC_hg19_v1_chrX_-_37706781 GQ129368 GQ129369	-79387	-	TSC_hg19_v1_chrX_+_37639311 AK304033 AK301491 AK312929 AK301476 X04011 DQ890878 DQ894032	-146848	+	AF049615 NM_012274 BC104428 BC104429 BC113024 BC113025	63917	+	BX647688 NM_001163335 NM_138780 TSC_hg19_v1_chrX_+_37865853 AK125106	79687	+	NM_001163334	106623	+	BC000968|DYNLT3|6990|dynein, light chain, Tctex-type 3##AK311851|DYNLT3|6990|dynein, light chain, Tctex-type 3##U02556|DYNLT3|6990|dynein, light chain, Tctex-type 3##NM_006520|DYNLT3|6990|dynein, light chain, Tctex-type 3##CR450320|DYNLT3|6990|dynein, light chain, Tctex-type 3##CR542213|DYNLT3|6990|dynein, light chain, Tctex-type 3##GQ129368|DYNLT3|6990|dynein, light chain, Tctex-type 3##GQ129369|DYNLT3|6990|dynein, light chain, Tctex-type 3##AK304033|CYBB|1536|cytochrome b-245, beta polypeptide##AK301491|CYBB|1536|cytochrome b-245, beta polypeptide##AK312929|CYBB|1536|cytochrome b-245, beta polypeptide##AK301476|CYBB|1536|cytochrome b-245, beta polypeptide##X04011|CYBB|1536|cytochrome b-245, beta polypeptide##DQ890878|CYBB|1536|cytochrome b-245, beta polypeptide##DQ894032|CYBB|1536|cytochrome b-245, beta polypeptide##AF049615|CXorf27|25763|chromosome X open reading frame 27##NM_012274|CXorf27|25763|chromosome X open reading frame 27##BC104428|CXorf27|25763|chromosome X open reading frame 27##BC104429|CXorf27|25763|chromosome X open reading frame 27##BC113024|CXorf27|25763|chromosome X open reading frame 27##BC113025|CXorf27|25763|chromosome X open reading frame 27##BX647688|SYTL5|94122|synaptotagmin-like 5##NM_001163335|SYTL5|94122|synaptotagmin-like 5##NM_138780|SYTL5|94122|synaptotagmin-like 5##AK125106|SYTL5|94122|synaptotagmin-like 5##NM_001163334|SYTL5|94122|synaptotagmin-like 5	0.921553	CTCF.p2:-16:0.922
chr10	125343293	125343422	reg1009953.p1	11.161	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-429001	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-429411	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-429459	+	AJ505757 NM_153442 BC112011 BC113462	82520	+	BC137492 BC146862 AY358565 NM_198148	308139	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	508542	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.93201	CTCF.p2:-5:0.932
chr11	6374759	6374889	reg1006967.p1	11.160	+	DQ892300 DQ895499 BC038387 TSC_hg19_v1_chr11_-_6341732 BC011585 NM_145040 AF339881	-33091	-	NM_176875 D13305 S70057 L07746 AK292064 AK226020 BC000740 AK314266 AB527993 AF239668 Y13464 DQ890577 DQ893737 AF441129 AY029770 AY322551 BT006789 L04473 L08112	-93794	+	NM_001037329 AK122736	-114499	+	TSC_hg19_v1_chr11_+_6411681 NM_000543 NM_001007593 AB209775 AK292388 X59960 BC041164 M59916 AY649987 HQ132745 HQ132746 HQ132747 HQ132748	36908	+	TSC_hg19_v1_chr11_-_6440299 AK293452 AF394214 L77864 NM_001164 AK293613 AK294495 AK311725	65499	-	AK297544 BC010854 NM_145689 TSC_hg19_v1_chr11_-_6440647	65816	-	DQ892300|PRKCDBP|112464|protein kinase C, delta binding protein##DQ895499|PRKCDBP|112464|protein kinase C, delta binding protein##BC038387|PRKCDBP|112464|protein kinase C, delta binding protein##BC011585|PRKCDBP|112464|protein kinase C, delta binding protein##NM_145040|PRKCDBP|112464|protein kinase C, delta binding protein##AF339881|PRKCDBP|112464|protein kinase C, delta binding protein##NM_176875|CCKBR|887|cholecystokinin B receptor##D13305|CCKBR|887|cholecystokinin B receptor##S70057|CCKBR|887|cholecystokinin B receptor##L07746|CCKBR|887|cholecystokinin B receptor##AK292064|CCKBR|887|cholecystokinin B receptor##AK226020|CCKBR|887|cholecystokinin B receptor##BC000740|CCKBR|887|cholecystokinin B receptor##AK314266|CCKBR|887|cholecystokinin B receptor##AF239668|CCKBR|887|cholecystokinin B receptor##DQ890577|CCKBR|887|cholecystokinin B receptor##DQ893737|CCKBR|887|cholecystokinin B receptor##AF441129|CCKBR|887|cholecystokinin B receptor##AY029770|CCKBR|887|cholecystokinin B receptor##AY322551|CCKBR|887|cholecystokinin B receptor##BT006789|CCKBR|887|cholecystokinin B receptor##L04473|CCKBR|887|cholecystokinin B receptor##L08112|CCKBR|887|cholecystokinin B receptor##NM_001037329|CNGA4|1262|cyclic nucleotide gated channel alpha 4##AK122736|CNGA4|1262|cyclic nucleotide gated channel alpha 4##NM_000543|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##NM_001007593|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AB209775|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK292388|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##X59960|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##BC041164|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##M59916|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AY649987|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132745|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132746|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132747|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132748|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK293452|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AF394214|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##L77864|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_001164|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK293613|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK294495|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK311725|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK297544|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##BC010854|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_145689|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)	0.995957	CTCF.p2:34:0.996
chr15	40971402	40971499	reg1008488.p1	11.159	+	TSC_hg19_v1_chr15_+_40886474 AB022190 BC014306 NM_144508 NM_170589 AK307605 AK307996 AF248041 AF461041 BC029373	-84986	+	AF173994 TSC_hg19_v1_chr15_+_40886230 BC043597	-85225	+	TSC_hg19_v1_chr15_+_40861536 AK055971 AK301706 NM_152260 CU677781	-109866	+	TSC_hg19_v1_chr15_-_40987295 AK125393	15845	-	EU362635 NM_001164270 NM_002875 NM_133487 TSC_hg19_v1_chr15_+_40987377 BC001459 AK291969 AK303089 AK313503 AK131299 NM_001164269	15901	+	TSC_hg19_v1_chr15_+_40987387 D14134 D13804	15966	+	AB022190|CASC5|57082|cancer susceptibility candidate 5##BC014306|CASC5|57082|cancer susceptibility candidate 5##NM_144508|CASC5|57082|cancer susceptibility candidate 5##NM_170589|CASC5|57082|cancer susceptibility candidate 5##AK307605|CASC5|57082|cancer susceptibility candidate 5##AK307996|CASC5|57082|cancer susceptibility candidate 5##AF248041|CASC5|57082|cancer susceptibility candidate 5##AF461041|CASC5|57082|cancer susceptibility candidate 5##BC029373|CASC5|57082|cancer susceptibility candidate 5##AF173994|CASC5|57082|cancer susceptibility candidate 5##BC043597|CASC5|57082|cancer susceptibility candidate 5##AK055971|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2##AK301706|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2##NM_152260|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2##AK125393|LOC100505648|100505648|uncharacterized LOC100505648##EU362635|RAD51|5888|RAD51 homolog (S. cerevisiae)##NM_001164270|RAD51|5888|RAD51 homolog (S. cerevisiae)##NM_002875|RAD51|5888|RAD51 homolog (S. cerevisiae)##NM_133487|RAD51|5888|RAD51 homolog (S. cerevisiae)##BC001459|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK291969|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK303089|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK313503|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK131299|RAD51|5888|RAD51 homolog (S. cerevisiae)##NM_001164269|RAD51|5888|RAD51 homolog (S. cerevisiae)##D14134|RAD51|5888|RAD51 homolog (S. cerevisiae)##D13804|RAD51|5888|RAD51 homolog (S. cerevisiae)	0.981382	CTCF.p2:-8:0.981
chr3	196705637	196705780	reg1010576.p1	11.159	+	TSC_hg19_v1_chr3_-_196695705 BC018804 BC044640 AK022830 NM_025163	-10030	-	TSC_hg19_v1_chr3_+_196669559 AL832915 BC000257 BC007882	-36137	+	TSC_hg19_v1_chr3_+_196669529 BC062368 AK123020	-36198	+	BC032042 TSC_hg19_v1_chr3_+_196729798	24102	+	BT007377 AB527337 M12154 BC093920 BC111947 BC143257 BC002623 BC001875 BC007550 BC053510 BC071910 TSC_hg19_v1_chr3_-_196756658 BC032752	50915	-	TSC_hg19_v1_chr3_-_196756689 NM_033316 NM_005929	50994	-	BC018804|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##BC044640|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##AK022830|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##NM_025163|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##AL832915|LOC152217|152217|uncharacterized LOC152217##BC000257|LOC152217|152217|uncharacterized LOC152217##BC007882|LOC152217|152217|uncharacterized LOC152217##BC062368|LOC152217|152217|uncharacterized LOC152217##AK123020|LOC152217|152217|uncharacterized LOC152217##BC032042|MFI2-AS1|100507057|MFI2 antisense RNA 1 (non-protein coding)##BT007377|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##M12154|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC093920|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC111947|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC143257|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC002623|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC001875|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC007550|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC053510|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC071910|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC032752|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_033316|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_005929|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5	0.474369	CTCF.p2:2:0.474
chr10	78933772	78933895	reg1008276.p1	11.158	+	AF267860 NM_032024	-1391315	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1772268	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1772352	-	AF118141 TSC_hg19_v1_chr10_-_79397246	463392	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	463503	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	463573	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.996322	CTCF.p2:-11:0.996
chr20	25291141	25291261	reg1008173.p1	11.158	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	-62443	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	-114721	+	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	-114831	+	CU680756 AK075023 AK290815 AK293495 TSC_hg19_v1_chr20_-_25371426	80184	-	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	80325	-	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	97121	+	NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK075023|ABHD12|26090|abhydrolase domain containing 12##AK290815|ABHD12|26090|abhydrolase domain containing 12##AK293495|ABHD12|26090|abhydrolase domain containing 12##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	0.0	
chr16	30032969	30033084	reg1008851.p1	11.157	+	TSC_hg19_v1_chr16_-_30022300 AK293651 BC055284 NM_003586	-10676	-	TSC_hg19_v1_chr16_+_30007570 AK309498 BC047712 BC035693 AY189289 AB590065 CU690476	-25430	+	TSC_hg19_v1_chr16_+_30007561 AK075133 NM_173618 AK130409 AK074137	-25495	+	AK058133 BC101433 BC101434 BC101435 BC101436 BC127955 NM_001109659 NM_001109660	1628	+	AB593090 AB593089 AF370365 NM_031478	9128	-	NM_000034 AK308748 TSC_hg19_v1_chr16_+_30064461	31410	+	AK293651|DOC2A|8448|double C2-like domains, alpha##BC055284|DOC2A|8448|double C2-like domains, alpha##NM_003586|DOC2A|8448|double C2-like domains, alpha##AK309498|INO80E|283899|INO80 complex subunit E##BC047712|INO80E|283899|INO80 complex subunit E##BC035693|INO80E|283899|INO80 complex subunit E##AY189289|INO80E|283899|INO80 complex subunit E##AK075133|INO80E|283899|INO80 complex subunit E##NM_173618|INO80E|283899|INO80 complex subunit E##AK130409|INO80E|283899|INO80 complex subunit E##AK074137|INO80E|283899|INO80 complex subunit E##AK058133|C16orf92|146378|chromosome 16 open reading frame 92##BC101433|C16orf92|146378|chromosome 16 open reading frame 92##BC101434|C16orf92|146378|chromosome 16 open reading frame 92##BC101435|C16orf92|146378|chromosome 16 open reading frame 92##BC101436|C16orf92|146378|chromosome 16 open reading frame 92##BC127955|C16orf92|146378|chromosome 16 open reading frame 92##NM_001109659|C16orf92|146378|chromosome 16 open reading frame 92##NM_001109660|C16orf92|146378|chromosome 16 open reading frame 92##AB593090|FAM57B|83723|family with sequence similarity 57, member B##AB593089|FAM57B|83723|family with sequence similarity 57, member B##AF370365|FAM57B|83723|family with sequence similarity 57, member B##NM_031478|FAM57B|83723|family with sequence similarity 57, member B##NM_000034|ALDOA|226|aldolase A, fructose-bisphosphate##AK308748|ALDOA|226|aldolase A, fructose-bisphosphate	0.99853	CTCF.p2:20:0.999
chr7	70163342	70163467	reg1010393.p1	11.156	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-1098816	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-1099075	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-1099568	+	TSC_hg19_v1_chr7_+_70231164 AK296981	67801	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	434384	+	AK123862 TSC_hg19_v1_chr7_-_71801809	1638374	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.113068	
chrX	153572096	153572247	reg1011152.p1	11.156	+	NM_001145934	-38763	+	NM_001145933 NM_012253 AK301724 TSC_hg19_v1_chrX_+_153524147 AK292261 AK302044 BC025382 AK302261 AK292224 AB527362 AM392578 AM393533 CU692986	-48052	+	DQ655913 TSC_hg19_v1_chrX_-_153523933	-48306	-	TSC_hg19_v1_chrX_-_153599586 AB191259 AB371575 AB371577 AB371578 AB371579 AB191260 AB371574 AB371576 AB463042 AK090427	27444	-	TSC_hg19_v1_chrX_-_153599726 AB593010	27551	-	X53416 TSC_hg19_v1_chrX_-_153602972	30779	-	NM_001145934|TKTL1|8277|transketolase-like 1##NM_001145933|TKTL1|8277|transketolase-like 1##NM_012253|TKTL1|8277|transketolase-like 1##AK301724|TKTL1|8277|transketolase-like 1##AK292261|TKTL1|8277|transketolase-like 1##AK302044|TKTL1|8277|transketolase-like 1##BC025382|TKTL1|8277|transketolase-like 1##AK302261|TKTL1|8277|transketolase-like 1##AK292224|TKTL1|8277|transketolase-like 1##AM392578|TKTL1|8277|transketolase-like 1##AM393533|TKTL1|8277|transketolase-like 1##DQ655913|TEX28|1527|testis expressed 28##AB191259|FLNA|2316|filamin A, alpha##AB371575|FLNA|2316|filamin A, alpha##AB371577|FLNA|2316|filamin A, alpha##AB371578|FLNA|2316|filamin A, alpha##AB371579|FLNA|2316|filamin A, alpha##AB191260|FLNA|2316|filamin A, alpha##AB371574|FLNA|2316|filamin A, alpha##AB371576|FLNA|2316|filamin A, alpha##AK090427|FLNA|2316|filamin A, alpha##AB593010|FLNA|2316|filamin A, alpha##X53416|FLNA|2316|filamin A, alpha	0.15483	
chr5	56134377	56134519	reg1010318.p1	11.155	+	TSC_hg19_v1_chr5_+_56111395 AF042838	-23030	+	TSC_hg19_v1_chr5_+_56111375 AK307828	-23084	+	NM_005921	-23549	+	NM_001171990 NM_153706 BC036528 AK309152	70684	+	TSC_hg19_v1_chr5_-_56247951 BX537798 BX640907 CR749246 CR749805 BX647359 BX648294 BC041348 NM_152622	113496	-	TSC_hg19_v1_chr5_+_56469684 AK311625 NM_001203246 NM_022913	335266	+	AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##NM_001171990|C5orf35|133383|chromosome 5 open reading frame 35##NM_153706|C5orf35|133383|chromosome 5 open reading frame 35##BC036528|C5orf35|133383|chromosome 5 open reading frame 35##AK309152|C5orf35|133383|chromosome 5 open reading frame 35##BX537798|MIER3|166968|mesoderm induction early response 1, family member 3##BX640907|MIER3|166968|mesoderm induction early response 1, family member 3##CR749246|MIER3|166968|mesoderm induction early response 1, family member 3##CR749805|MIER3|166968|mesoderm induction early response 1, family member 3##BX647359|MIER3|166968|mesoderm induction early response 1, family member 3##BX648294|MIER3|166968|mesoderm induction early response 1, family member 3##BC041348|MIER3|166968|mesoderm induction early response 1, family member 3##NM_152622|MIER3|166968|mesoderm induction early response 1, family member 3##AK311625|GPBP1|65056|GC-rich promoter binding protein 1##NM_001203246|GPBP1|65056|GC-rich promoter binding protein 1##NM_022913|GPBP1|65056|GC-rich promoter binding protein 1	0.914061	CTCF.p2:20:0.914
chr9	35258975	35259103	reg1010414.p1	11.155	+	TSC_hg19_v1_chr9_+_35162109 BC111781 BC111800	-96930	+	TSC_hg19_v1_chr9_+_35161986 NM_006377 AB209998 AK296836 AF020202	-97037	+	TSC_hg19_v1_chr9_-_35115860 AK022837 AK021622 BC004406 NM_025182 AK307682	-143162	-	TSC_hg19_v1_chr9_+_35489994 NM_014806	230958	+	TSC_hg19_v1_chr9_+_35490107 BC150211 AB002373 BC042915	231045	+	NM_001135999	279589	+	BC111781|UNC13B|10497|unc-13 homolog B (C. elegans)##BC111800|UNC13B|10497|unc-13 homolog B (C. elegans)##NM_006377|UNC13B|10497|unc-13 homolog B (C. elegans)##AB209998|UNC13B|10497|unc-13 homolog B (C. elegans)##AK296836|UNC13B|10497|unc-13 homolog B (C. elegans)##AF020202|UNC13B|10497|unc-13 homolog B (C. elegans)##AK022837|FAM214B|80256|family with sequence similarity 214, member B##AK021622|FAM214B|80256|family with sequence similarity 214, member B##BC004406|FAM214B|80256|family with sequence similarity 214, member B##NM_025182|FAM214B|80256|family with sequence similarity 214, member B##AK307682|FAM214B|80256|family with sequence similarity 214, member B##NM_014806|RUSC2|9853|RUN and SH3 domain containing 2##BC150211|RUSC2|9853|RUN and SH3 domain containing 2##AB002373|RUSC2|9853|RUN and SH3 domain containing 2##NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2	0.0	
chr10	99313371	99313507	reg1008603.p1	11.154	+	TSC_hg19_v1_chr10_+_99258879 CU675619	-54521	+	TSC_hg19_v1_chr10_+_99258694 BC007331 NM_024954 AK222597 AK021869	-54719	+	NM_022362 AF319947	-55001	-	AJ583444 AK056990 NM_001129981 NM_020349 BC107759	18808	+	AK094791 TSC_hg19_v1_chr10_+_99344126 BC011916 NM_001134670 NM_138413 BC045550 BC057821 AK293733	30666	+	TSC_hg19_v1_chr10_+_99344421 AK289440 CU691258 CU692268 EU831607 EU831618 EU831694 EU831704	31001	+	BC007331|UBTD1|80019|ubiquitin domain containing 1##NM_024954|UBTD1|80019|ubiquitin domain containing 1##AK222597|UBTD1|80019|ubiquitin domain containing 1##AK021869|UBTD1|80019|ubiquitin domain containing 1##NM_022362|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AF319947|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AJ583444|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##AK056990|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##NM_001129981|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##NM_020349|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##BC107759|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##AK094791|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC011916|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##NM_001134670|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##NM_138413|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC045550|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC057821|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##AK289440|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831607|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831618|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831694|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831704|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1	0.998512	CTCF.p2:8:0.999
chr16	55735757	55735873	reg1007843.p2	11.154	+	BC039309 NM_001172502 AK301811	-30213	+	NM_001043 BC060831 NM_001172504	-45362	+	TSC_hg19_v1_chr16_+_55689899 AK312793 M65105	-45830	+	DQ891472 DQ894656 AK301651 AB025026 TSC_hg19_v1_chr16_-_55867009 M73499 S73751 AF177775 BC009706 AY268104 L07764	131178	-	BC110338 TSC_hg19_v1_chr16_-_55867027 AB119996 AB119995 BC012418 AK290623 AK292209 NM_001025194 NM_001025195 NM_001266	131230	-	AY907669 BC069548 BC069501 BC117126 BC143692 AK056109 NM_001143685 NM_145024	173429	-	BC039309|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##NM_001172502|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##AK301811|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##NM_001043|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##BC060831|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##NM_001172504|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##AK312793|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##M65105|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##DQ891472|CES1|1066|carboxylesterase 1##DQ894656|CES1|1066|carboxylesterase 1##AK301651|CES1|1066|carboxylesterase 1##AB025026|CES1|1066|carboxylesterase 1##M73499|CES1|1066|carboxylesterase 1##S73751|CES1|1066|carboxylesterase 1##AF177775|CES1|1066|carboxylesterase 1##BC009706|CES1|1066|carboxylesterase 1##AY268104|CES1|1066|carboxylesterase 1##L07764|CES1|1066|carboxylesterase 1##BC110338|CES1|1066|carboxylesterase 1##AB119996|CES1|1066|carboxylesterase 1##AB119995|CES1|1066|carboxylesterase 1##BC012418|CES1|1066|carboxylesterase 1##AK290623|CES1|1066|carboxylesterase 1##AK292209|CES1|1066|carboxylesterase 1##NM_001025194|CES1|1066|carboxylesterase 1##NM_001025195|CES1|1066|carboxylesterase 1##NM_001266|CES1|1066|carboxylesterase 1##AY907669|CES5A|221223|carboxylesterase 5A##BC069548|CES5A|221223|carboxylesterase 5A##BC069501|CES5A|221223|carboxylesterase 5A##BC117126|CES5A|221223|carboxylesterase 5A##BC143692|CES5A|221223|carboxylesterase 5A##AK056109|CES5A|221223|carboxylesterase 5A##NM_001143685|CES5A|221223|carboxylesterase 5A##NM_145024|CES5A|221223|carboxylesterase 5A	0.984863	CTCF.p2:0:0.985
chr22	30651915	30652060	reg1005288.p1	11.154	+	AB527710 X13967 BC093733 BC093735 BC143305 BC069540 TSC_hg19_v1_chr22_-_30642749 AK315310 NM_002309	-9248	-	BC030013 NM_152510	-175535	+	BC142713 TSC_hg19_v1_chr22_+_30279201 AB002369 BC152455	-372726	+	CR541703 AB463155 CU013134 CU013422 DQ892537 DQ895748 CR456534 BC011589 NM_020530 TSC_hg19_v1_chr22_-_30662841	10828	-	CU013000 CU013288 CU692418 AB528172 BC021927 AK309436 AK055587 TSC_hg19_v1_chr22_-_30685566 CR456449 AK310246 NM_001037666	33563	-	TSC_hg19_v1_chr22_-_30722928 AB449894 AB590468 BC143051 BC143052 BC150187 CT841514 BC150214 AK127939 AF331038 BC022201 BC136815 BC171775 AK074656 BC142940 NM_001204240 NM_031937	70940	-	X13967|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093733|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093735|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC143305|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC069540|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AK315310|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##NM_002309|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC030013|HORMAD2|150280|HORMA domain containing 2##NM_152510|HORMAD2|150280|HORMA domain containing 2##BC142713|MTMR3|8897|myotubularin related protein 3##AB002369|MTMR3|8897|myotubularin related protein 3##BC152455|MTMR3|8897|myotubularin related protein 3##CR541703|OSM|5008|oncostatin M##CU013134|OSM|5008|oncostatin M##CU013422|OSM|5008|oncostatin M##DQ892537|OSM|5008|oncostatin M##DQ895748|OSM|5008|oncostatin M##CR456534|OSM|5008|oncostatin M##BC011589|OSM|5008|oncostatin M##NM_020530|OSM|5008|oncostatin M##CU013000|GATSL3|652968|GATS protein-like 3##CU013288|GATSL3|652968|GATS protein-like 3##BC021927|GATSL3|652968|GATS protein-like 3##AK309436|GATSL3|652968|GATS protein-like 3##AK055587|GATSL3|652968|GATS protein-like 3##CR456449|GATSL3|652968|GATS protein-like 3##AK310246|GATSL3|652968|GATS protein-like 3##NM_001037666|GATSL3|652968|GATS protein-like 3##AB449894|TBC1D10A|83874|TBC1 domain family, member 10A##BC143051|TBC1D10A|83874|TBC1 domain family, member 10A##BC143052|TBC1D10A|83874|TBC1 domain family, member 10A##BC150187|TBC1D10A|83874|TBC1 domain family, member 10A##CT841514|TBC1D10A|83874|TBC1 domain family, member 10A##BC150214|TBC1D10A|83874|TBC1 domain family, member 10A##AK127939|TBC1D10A|83874|TBC1 domain family, member 10A##AF331038|TBC1D10A|83874|TBC1 domain family, member 10A##BC022201|TBC1D10A|83874|TBC1 domain family, member 10A##BC136815|TBC1D10A|83874|TBC1 domain family, member 10A##BC171775|TBC1D10A|83874|TBC1 domain family, member 10A##AK074656|TBC1D10A|83874|TBC1 domain family, member 10A##BC142940|TBC1D10A|83874|TBC1 domain family, member 10A##NM_001204240|TBC1D10A|83874|TBC1 domain family, member 10A##NM_031937|TBC1D10A|83874|TBC1 domain family, member 10A	0.219332	CTCF.p2:-1:0.219
chr4	38761304	38761437	reg1009268.p1	11.154	+	AF289565 TSC_hg19_v1_chr4_-_38666549	-94881	-	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	-95544	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-782353	+	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	23229	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	45049	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	97058	-	AF289565|FLJ13197|79667|uncharacterized FLJ13197##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6	0.994628	CTCF.p2:-11:0.995
chr10	112295703	112295876	reg1008549.p1	11.153	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-38038	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-231089	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-231196	-	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	31703	+	AF067163 TSC_hg19_v1_chr10_+_112344155	48326	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	108340	+	NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20	0.308826	CTCF.p2:-2:0.214
chr16	90148456	90148585	reg1010740.p1	11.153	+	AM690992 AM690991 AM690993 NM_001098173	-6186	-	AB527979 BC107033 AF274347 AF274348 NM_052996	-19859	-	AF050081 NM_001214	-52212	-	TSC_hg19_v1_chr16_+_90168671 AK092558 AX747598	20156	+	None	None	None	None	None	None	AM690992|PRDM7|11105|PR domain containing 7##AM690991|PRDM7|11105|PR domain containing 7##AM690993|PRDM7|11105|PR domain containing 7##NM_001098173|PRDM7|11105|PR domain containing 7##BC107033|PRDM7|11105|PR domain containing 7##AF274347|PRDM7|11105|PR domain containing 7##AF274348|PRDM7|11105|PR domain containing 7##NM_052996|PRDM7|11105|PR domain containing 7##AF050081|C16orf3|750|chromosome 16 open reading frame 3##NM_001214|C16orf3|750|chromosome 16 open reading frame 3##AK092558|FAM157C|100132055|family with sequence similarity 157, member C	0.923286	CTCF.p2:-21:0.923
chr20	23181695	23181818	reg1009621.p1	11.153	+	AB527124 AM393282 AM393752 DQ891055 DQ894234 TSC_hg19_v1_chr20_-_23066962 AJ295142 AB209895 BC028075 AK299957 NM_012072 U94333	-114823	-	TSC_hg19_v1_chr20_-_23062805 AK056764	-118944	-	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	-151518	-	BC003410 NM_013248 TSC_hg19_v1_chr20_+_23331435 AK026360 BC000759 BC003029 AF156957 BC002687	149688	+	AK295362 TSC_hg19_v1_chr20_+_23342818 AK056477 AK293942 AK314599	161057	+	TSC_hg19_v1_chr20_+_23342853 AK289814	161103	+	AM393282|CD93|22918|CD93 molecule##AM393752|CD93|22918|CD93 molecule##DQ891055|CD93|22918|CD93 molecule##DQ894234|CD93|22918|CD93 molecule##AJ295142|CD93|22918|CD93 molecule##AB209895|CD93|22918|CD93 molecule##BC028075|CD93|22918|CD93 molecule##AK299957|CD93|22918|CD93 molecule##NM_012072|CD93|22918|CD93 molecule##U94333|CD93|22918|CD93 molecule##AK056764|CD93|22918|CD93 molecule##BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##BC003410|NXT1|29107|NTF2-like export factor 1##NM_013248|NXT1|29107|NTF2-like export factor 1##AK026360|NXT1|29107|NTF2-like export factor 1##BC000759|NXT1|29107|NTF2-like export factor 1##BC003029|NXT1|29107|NTF2-like export factor 1##AF156957|NXT1|29107|NTF2-like export factor 1##BC002687|NXT1|29107|NTF2-like export factor 1##AK295362|GZF1|64412|GDNF-inducible zinc finger protein 1##AK056477|GZF1|64412|GDNF-inducible zinc finger protein 1##AK293942|GZF1|64412|GDNF-inducible zinc finger protein 1##AK314599|GZF1|64412|GDNF-inducible zinc finger protein 1##AK289814|GZF1|64412|GDNF-inducible zinc finger protein 1	0.168047	
chr7	15344773	15344883	reg1007313.p1	11.153	+	BC105005 BC143632 BC143633 NM_004080 NM_145695	-463814	-	NM_001163148	-1313779	-	NM_001163149 X87175	-1313960	-	BC108676 AK131284 NM_001004320	256778	-	AB463880 CR536553 CU677801 L36328 TSC_hg19_v1_chr7_-_15726203 BC017021 AK313386	381301	-	TSC_hg19_v1_chr7_-_15726309 AK309472 X82629 NM_005924	381463	-	BC105005|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143632|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143633|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_004080|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_145695|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_001163148|ETV1|2115|ets variant 1##NM_001163149|ETV1|2115|ets variant 1##X87175|ETV1|2115|ets variant 1##BC108676|AGMO|392636|alkylglycerol monooxygenase##AK131284|AGMO|392636|alkylglycerol monooxygenase##NM_001004320|AGMO|392636|alkylglycerol monooxygenase##CR536553|MEOX2|4223|mesenchyme homeobox 2##L36328|MEOX2|4223|mesenchyme homeobox 2##BC017021|MEOX2|4223|mesenchyme homeobox 2##AK313386|MEOX2|4223|mesenchyme homeobox 2##AK309472|MEOX2|4223|mesenchyme homeobox 2##X82629|MEOX2|4223|mesenchyme homeobox 2##NM_005924|MEOX2|4223|mesenchyme homeobox 2	0.996879	CTCF.p2:-11:0.997
chr1	162583599	162583733	reg1008958.p2	11.152	+	TSC_hg19_v1_chr1_+_162531349 AK312685 S73498	-52293	+	TSC_hg19_v1_chr1_+_162531320 NM_003115 BC009377	-52384	+	TSC_hg19_v1_chr1_+_162467635 AJ536197 AK292369 AB384827	-115954	+	TSC_hg19_v1_chr1_+_162602235 NM_001014796 NM_006182 AK095975 AK225196 X74764 BX640899 BC052998 AK314388	18580	+	AK225063 TSC_hg19_v1_chr1_+_162602308	18645	+	AK022929 AF145023 NM_016371 BC065246 AK290741 BC007068 AJ249179 AF098786 AY358962 BT007075 CU675533 CU688024 GQ129366 GQ129367	176874	+	AK312685|UAP1|6675|UDP-N-acteylglucosamine pyrophosphorylase 1##S73498|UAP1|6675|UDP-N-acteylglucosamine pyrophosphorylase 1##NM_003115|UAP1|6675|UDP-N-acteylglucosamine pyrophosphorylase 1##BC009377|UAP1|6675|UDP-N-acteylglucosamine pyrophosphorylase 1##AJ536197|UHMK1|127933|U2AF homology motif (UHM) kinase 1##AK292369|UHMK1|127933|U2AF homology motif (UHM) kinase 1##AB384827|UHMK1|127933|U2AF homology motif (UHM) kinase 1##NM_001014796|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_006182|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK095975|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK225196|DDR2|4921|discoidin domain receptor tyrosine kinase 2##X74764|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BX640899|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BC052998|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK314388|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK225063|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK022929|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF145023|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##NM_016371|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC065246|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AK290741|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC007068|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AJ249179|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF098786|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AY358962|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BT007075|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129366|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129367|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7	0.901937	CTCF.p2:-16:0.902
chr11	7716036	7716159	reg1009274.p1	11.152	+	AB209000 BC001346 AF169802 NM_016229	-21345	-	AK296718 TSC_hg19_v1_chr11_+_7618421	-97679	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	-180854	+	NM_198185	11843	-	AF173006 NM_153444 HQ258379 BC101710 BC113557	102406	-	AB463971 AF158377 NM_153445	131421	-	AB209000|CYB5R2|51700|cytochrome b5 reductase 2##BC001346|CYB5R2|51700|cytochrome b5 reductase 2##AF169802|CYB5R2|51700|cytochrome b5 reductase 2##NM_016229|CYB5R2|51700|cytochrome b5 reductase 2##AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##NM_198185|OVCH2|341277|ovochymase 2 (gene/pseudogene)##AF173006|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##NM_153444|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##HQ258379|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##BC101710|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##BC113557|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##AF158377|OR5P3|120066|olfactory receptor, family 5, subfamily P, member 3##NM_153445|OR5P3|120066|olfactory receptor, family 5, subfamily P, member 3	0.999301	CTCF.p2:-16:0.999
chr11	126310840	126310982	reg1010115.p1	11.151	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	-34913	+	NM_006278 X74570	-84816	+	TSC_hg19_v1_chr11_-_126225452 AK096370	-85448	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	559749	-	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	559814	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	562394	+	AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK096370|FLJ39051|399972|uncharacterized LOC399972##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)	0.997382	CTCF.p2:-4:0.997
chr16	79081379	79081499	reg1009801.p1	11.151	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-947984	+	NM_001244755	-1018454	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	-1024989	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	553176	-	AF125108 NM_130897 BC054892 BC035232	1493449	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	1756608	-	NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2	0.344604	CTCF.p2:-5:0.303
chr17	41176546	41176660	reg1006622.p1	11.150	+	TSC_hg19_v1_chr17_-_41174433 AK290460 NM_006373	-2150	-	TSC_hg19_v1_chr17_-_41174403 AK000237	-2200	-	BC001913 BT007369 HQ258013 BC014279 TSC_hg19_v1_chr17_-_41174385 AK298536 AK097072 BC008725 BC068489 BC015041 BC090858	-2242	-	TSC_hg19_v1_chr17_+_41177247 AK290199 NM_005440 BC094842 BC104986 BC104990 AF498968 BT019394 X95456 BC018096 AB209778	723	+	AB385129 AY751490 CU687226 JN686490 U64805 NM_007298	99518	-	AF005068 BC106745 BC106746 BC114511 BC114562 AK308084 DQ333386 DQ333387 DQ363751 BC085615 TSC_hg19_v1_chr17_-_41277382 AB621825 AK307553 U14680 BC012577 BC030969 BC115037	100750	-	AK290460|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##NM_006373|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##AK000237|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC001913|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BT007369|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##HQ258013|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC014279|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##AK298536|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##AK097072|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC008725|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC068489|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC015041|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC090858|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##AK290199|RND2|8153|Rho family GTPase 2##NM_005440|RND2|8153|Rho family GTPase 2##BC094842|RND2|8153|Rho family GTPase 2##BC104986|RND2|8153|Rho family GTPase 2##BC104990|RND2|8153|Rho family GTPase 2##AF498968|RND2|8153|Rho family GTPase 2##BT019394|RND2|8153|Rho family GTPase 2##X95456|RND2|8153|Rho family GTPase 2##BC018096|RND2|8153|Rho family GTPase 2##AB209778|RND2|8153|Rho family GTPase 2##AY751490|BRCA1|672|breast cancer 1, early onset##JN686490|BRCA1|672|breast cancer 1, early onset##U64805|BRCA1|672|breast cancer 1, early onset##NM_007298|BRCA1|672|breast cancer 1, early onset##AF005068|BRCA1|672|breast cancer 1, early onset##BC106745|BRCA1|672|breast cancer 1, early onset##BC106746|BRCA1|672|breast cancer 1, early onset##BC114511|BRCA1|672|breast cancer 1, early onset##BC114562|BRCA1|672|breast cancer 1, early onset##AK308084|BRCA1|672|breast cancer 1, early onset##DQ333386|BRCA1|672|breast cancer 1, early onset##DQ333387|BRCA1|672|breast cancer 1, early onset##DQ363751|BRCA1|672|breast cancer 1, early onset##BC085615|BRCA1|672|breast cancer 1, early onset##AK307553|BRCA1|672|breast cancer 1, early onset##U14680|BRCA1|672|breast cancer 1, early onset##BC012577|BRCA1|672|breast cancer 1, early onset##BC030969|BRCA1|672|breast cancer 1, early onset##BC115037|BRCA1|672|breast cancer 1, early onset	0.339069	CTCF.p2:-11:0.339
chr6	16286412	16286562	reg1010975.p1	11.150	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-47636	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-143177	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-157050	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	475210	-	NM_001190766	816001	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	995367	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.978267	CTCF.p2:2:0.978
chr4	164254015	164254133	reg1007637.p2	11.149	+	NM_000909	-128	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	-165996	-	TSC_hg19_v1_chr4_-_164088043 AK308601	-166037	-	BC042416 NM_006174	11016	+	AB527371 AM393077 BC143053 BC143054 BC146698 CR533560 CU688544 BC142943 AL136779 AK057325 BC125101 AK314517 BC028707 NM_032136	140891	-	NM_018352 TSC_hg19_v1_chr4_+_164415764	161644	+	NM_000909|NPY1R|4886|neuropeptide Y receptor Y1##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC042416|NPY5R|4889|neuropeptide Y receptor Y5##NM_006174|NPY5R|4889|neuropeptide Y receptor Y5##AM393077|TKTL2|84076|transketolase-like 2##BC143053|TKTL2|84076|transketolase-like 2##BC143054|TKTL2|84076|transketolase-like 2##BC146698|TKTL2|84076|transketolase-like 2##CR533560|TKTL2|84076|transketolase-like 2##BC142943|TKTL2|84076|transketolase-like 2##AL136779|TKTL2|84076|transketolase-like 2##AK057325|TKTL2|84076|transketolase-like 2##BC125101|TKTL2|84076|transketolase-like 2##AK314517|TKTL2|84076|transketolase-like 2##BC028707|TKTL2|84076|transketolase-like 2##NM_032136|TKTL2|84076|transketolase-like 2##NM_018352|C4orf43|55319|chromosome 4 open reading frame 43	0.999513	CTCF.p2:0:1.000
chr11	112426566	112426669	reg1009916.p1	11.147	+	AY364435 NM_001145024	-295035	-	TSC_hg19_v1_chr11_+_112097100 NM_000317 BC018029 D17400 AK310768 BC009686 AK307133 M97655 AM392676 AM393300 AM393668 DQ890961 DQ894133	-329490	+	NM_001037290 AK027801 AK297853 AB096252	-379512	+	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 TSC_hg19_v1_chr11_+_112831996 AK314589	405370	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	405514	+	X16841 TSC_hg19_v1_chr11_+_112832212	405589	+	AY364435|C11orf34|349633|chromosome 11 open reading frame 34##NM_001145024|C11orf34|349633|chromosome 11 open reading frame 34##NM_000317|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC018029|PTS|5805|6-pyruvoyltetrahydropterin synthase##D17400|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK310768|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC009686|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK307133|PTS|5805|6-pyruvoyltetrahydropterin synthase##M97655|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM392676|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393300|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393668|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ890961|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ894133|PTS|5805|6-pyruvoyltetrahydropterin synthase##NM_001037290|BCO2|83875|beta-carotene oxygenase 2##AK027801|BCO2|83875|beta-carotene oxygenase 2##AK297853|BCO2|83875|beta-carotene oxygenase 2##AB096252|BCO2|83875|beta-carotene oxygenase 2##NM_000615|NCAM1|4684|neural cell adhesion molecule 1##NM_001076682|NCAM1|4684|neural cell adhesion molecule 1##NM_001242607|NCAM1|4684|neural cell adhesion molecule 1##NM_001242608|NCAM1|4684|neural cell adhesion molecule 1##NM_181351|NCAM1|4684|neural cell adhesion molecule 1##AK314589|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1	0.842634	CTCF.p2:3:0.843
chr20	46354216	46354354	reg1010382.p1	11.147	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-223601	+	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	-223663	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-368797	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	60467	-	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	61033	-	AB037836 TSC_hg19_v1_chr20_-_47444291	1090001	-	AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1	0.859329	CTCF.p2:4:0.847
chr2	228727053	228727206	reg1012433.p1	11.147	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	-48538	+	AF271633 BC032014 AK301490 AF283317 AK312464 NM_025243	-144408	-	AM393148 AM393273 BC131618 AL359944 CR749679 AK055355 NM_001162483 NM_020161	-229211	-	AK097409 NM_178821 BC036377 AK098821 AK301861	9223	+	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	319233	-	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	1408876	-	BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AF271633|SLC19A3|80704|solute carrier family 19, member 3##BC032014|SLC19A3|80704|solute carrier family 19, member 3##AK301490|SLC19A3|80704|solute carrier family 19, member 3##AF283317|SLC19A3|80704|solute carrier family 19, member 3##AK312464|SLC19A3|80704|solute carrier family 19, member 3##NM_025243|SLC19A3|80704|solute carrier family 19, member 3##AM393148|C2orf83|56918|chromosome 2 open reading frame 83##AM393273|C2orf83|56918|chromosome 2 open reading frame 83##BC131618|C2orf83|56918|chromosome 2 open reading frame 83##AL359944|C2orf83|56918|chromosome 2 open reading frame 83##CR749679|C2orf83|56918|chromosome 2 open reading frame 83##AK055355|C2orf83|56918|chromosome 2 open reading frame 83##NM_001162483|C2orf83|56918|chromosome 2 open reading frame 83##NM_020161|C2orf83|56918|chromosome 2 open reading frame 83##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1	0.998907	CTCF.p2:3:0.999
chr1	150594118	150594236	reg1008634.p1	11.146	+	TSC_hg19_v1_chr1_-_150587883 AK124918	-6258	-	TSC_hg19_v1_chr1_-_150552129 NM_001197320 NM_021960 NM_182763	-42007	-	TSC_hg19_v1_chr1_-_150552077 AK316267 AK297217 AK304775 AK312508	-42096	-	TSC_hg19_v1_chr1_-_150601610 AK290064 NM_207045 NM_207046 NM_207047	7405	-	TSC_hg19_v1_chr1_-_150601913 CR457130 CR536578 EU832303 EU832387	7752	-	TSC_hg19_v1_chr1_-_150602036 BC069208	7851	-	NM_001197320|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_021960|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_182763|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK316267|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK297217|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK304775|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK312508|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK290064|ENSA|2029|endosulfine alpha##NM_207045|ENSA|2029|endosulfine alpha##NM_207046|ENSA|2029|endosulfine alpha##NM_207047|ENSA|2029|endosulfine alpha##CR457130|ENSA|2029|endosulfine alpha##CR536578|ENSA|2029|endosulfine alpha##EU832303|ENSA|2029|endosulfine alpha##EU832387|ENSA|2029|endosulfine alpha##BC069208|ENSA|2029|endosulfine alpha	0.973729	CTCF.p2:2:0.974
chr16	29239558	29239666	reg1008011.p1	11.146	+	TSC_hg19_v1_chr16_+_29086310 BC042920 AK225670 AK298442 AK301253	-153307	+	AK307342 NM_001014987 NM_001014988 NM_014387 TSC_hg19_v1_chr16_+_28996403 AJ223280	-243214	+	BC011563 NM_001014989	-243466	+	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	226239	+	BC022832 NM_001031827 NM_001039182	226672	-	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	231614	+	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK307342|LAT|27040|linker for activation of T cells##NM_001014987|LAT|27040|linker for activation of T cells##NM_001014988|LAT|27040|linker for activation of T cells##NM_014387|LAT|27040|linker for activation of T cells##AJ223280|LAT|27040|linker for activation of T cells##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3	0.99827	CTCF.p2:-15:0.998
chr2	191669037	191669196	reg1009293.p2	11.146	+	TSC_hg19_v1_chr2_+_191513840 NM_005966 BC035724 AK292446	-155150	+	TSC_hg19_v1_chr2_-_191399454 NM_001142645	-269650	-	AK296987 TSC_hg19_v1_chr2_-_191399436	-269689	-	AK289747 NM_014905 TSC_hg19_v1_chr2_+_191745546	76430	+	TSC_hg19_v1_chr2_+_191745547 BC038507 AB020645 AF158555	76441	+	TSC_hg19_v1_chr2_+_191745568 AF097495 Y08264 AF327434	76468	+	NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##NM_001142645|TMEM194B|100131211|transmembrane protein 194B##AK296987|TMEM194B|100131211|transmembrane protein 194B##AK289747|GLS|2744|glutaminase##NM_014905|GLS|2744|glutaminase##BC038507|GLS|2744|glutaminase##AB020645|GLS|2744|glutaminase##AF158555|GLS|2744|glutaminase##AF097495|GLS|2744|glutaminase##Y08264|GLS|2744|glutaminase##AF327434|GLS|2744|glutaminase	0.0	
chr10	20108505	20108641	reg1008447.p1	11.145	+	TSC_hg19_v1_chr10_+_20105360 AK304591 AY358486 NM_032812	-3200	+	TSC_hg19_v1_chr10_+_18948359 NM_178815 BC024163 AK027275 AF494061 DQ893166 DQ896464	-1160152	+	BC033534 TSC_hg19_v1_chr10_-_18948215	-1160376	-	NM_006393 Y16241	1077957	-	BC140744 BC144447 NM_001010896 NM_001177483	1326914	-	AB209311 TSC_hg19_v1_chr10_-_21462987	1354414	-	AK304591|PLXDC2|84898|plexin domain containing 2##AY358486|PLXDC2|84898|plexin domain containing 2##NM_032812|PLXDC2|84898|plexin domain containing 2##NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B##BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B##AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B##AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B##NM_006393|NEBL|10529|nebulette##Y16241|NEBL|10529|nebulette##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113##AB209311|NEBL|10529|nebulette	0.995511	CTCF.p2:-7:0.996
chr11	10098568	10098660	reg1007713.p2	11.145	+	AK098060 TSC_hg19_v1_chr11_+_9779882	-318752	+	TSC_hg19_v1_chr11_+_9685669 AB014540 BC000134 CU674300 AF210818 AK304104	-412908	+	BC000616 TSC_hg19_v1_chr11_+_9685651 AF134894	-412963	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	217152	-	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	228015	+	AK295046 NM_001172431	373253	+	AK098060|LOC283104|283104|uncharacterized LOC283104##AB014540|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000134|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF210818|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AK304104|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000616|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF134894|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3	0.999322	CTCF.p2:-4:0.999
chr13	78139932	78140063	reg1008348.p2	11.145	+	NM_001160706 NM_003843 NM_144777 BC020726 AF045941 AK025320 AK222720 AK301659	-30146	+	NM_015057 TSC_hg19_v1_chr13_-_77901230	-238794	-	TSC_hg19_v1_chr13_-_77601303 AK314442 NM_012158	-538666	-	TSC_hg19_v1_chr13_+_78271822 NM_001242868	131907	+	AK294201 NM_001040153	133018	+	NM_001242869 NM_001242870 NM_001242871 NM_144595 AL834203 AK289600 BC045177 AK289714 AK295423	175409	+	NM_001160706|SCEL|8796|sciellin##NM_003843|SCEL|8796|sciellin##NM_144777|SCEL|8796|sciellin##BC020726|SCEL|8796|sciellin##AF045941|SCEL|8796|sciellin##AK025320|SCEL|8796|sciellin##AK222720|SCEL|8796|sciellin##AK301659|SCEL|8796|sciellin##NM_015057|MYCBP2|23077|MYC binding protein 2##AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_001242868|SLAIN1|122060|SLAIN motif family, member 1##AK294201|SLAIN1|122060|SLAIN motif family, member 1##NM_001040153|SLAIN1|122060|SLAIN motif family, member 1##NM_001242869|SLAIN1|122060|SLAIN motif family, member 1##NM_001242870|SLAIN1|122060|SLAIN motif family, member 1##NM_001242871|SLAIN1|122060|SLAIN motif family, member 1##NM_144595|SLAIN1|122060|SLAIN motif family, member 1##AL834203|SLAIN1|122060|SLAIN motif family, member 1##AK289600|SLAIN1|122060|SLAIN motif family, member 1##BC045177|SLAIN1|122060|SLAIN motif family, member 1##AK289714|SLAIN1|122060|SLAIN motif family, member 1##AK295423|SLAIN1|122060|SLAIN motif family, member 1	0.0	
chr22	20616580	20616704	reg1008645.p1	11.145	+	NM_015672	-154857	-	BC072398 TSC_hg19_v1_chr22_-_20427830	-188812	-	NM_001242313	-238974	+	TSC_hg19_v1_chr22_+_20748463 BC056902 X92715 AK291358 AK299569 NM_003426 BC048295 BC013741	131803	+	AB052951 TSC_hg19_v1_chr22_-_20792077	175420	-	TSC_hg19_v1_chr22_-_20792108 AB024433 AF522196 NM_153334 NM_182895	175484	-	NM_015672|RIMBP3|85376|RIMS binding protein 3##BC072398|PI4KAP1|728233|phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1##NM_001242313|TMEM191B|728229|transmembrane protein 191B##BC056902|ZNF74|7625|zinc finger protein 74##X92715|ZNF74|7625|zinc finger protein 74##AK291358|ZNF74|7625|zinc finger protein 74##AK299569|ZNF74|7625|zinc finger protein 74##NM_003426|ZNF74|7625|zinc finger protein 74##BC048295|ZNF74|7625|zinc finger protein 74##BC013741|ZNF74|7625|zinc finger protein 74##AB052951|SCARF2|91179|scavenger receptor class F, member 2##AB024433|SCARF2|91179|scavenger receptor class F, member 2##AF522196|SCARF2|91179|scavenger receptor class F, member 2##NM_153334|SCARF2|91179|scavenger receptor class F, member 2##NM_182895|SCARF2|91179|scavenger receptor class F, member 2	0.962445	CTCF.p2:-15:0.962
chrX	130926467	130926623	reg1007810.p2	11.145	+	BC137050 AB529233 NM_001004486	-248547	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-503133	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-503283	-	TSC_hg19_v1_chrX_-_130964633 AK097911	38106	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	230776	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	231095	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.034976	
chr19	53928392	53928502	reg1007817.p2	11.144	+	TSC_hg19_v1_chr19_+_53898427 BC140724 BC017357	-30022	+	TSC_hg19_v1_chr19_+_53898401 AK316300 BX647981 AK295840	-30043	+	TSC_hg19_v1_chr19_+_53898385 NM_001040185	-30056	+	TSC_hg19_v1_chr19_+_53935236 NM_001008401	6782	+	BX647962 TSC_hg19_v1_chr19_+_53935241	6793	+	TSC_hg19_v1_chr19_+_53935248 BC103708 AK094777	6799	+	BC140724|ZNF765|91661|zinc finger protein 765##BC017357|ZNF765|91661|zinc finger protein 765##AK316300|ZNF765|91661|zinc finger protein 765##BX647981|ZNF765|91661|zinc finger protein 765##AK295840|ZNF765|91661|zinc finger protein 765##NM_001040185|ZNF765|91661|zinc finger protein 765##NM_001008401|ZNF761|388561|zinc finger protein 761##BX647962|LOC147804|147804|tropomyosin 3 pseudogene##BC103708|ZNF761|388561|zinc finger protein 761##AK094777|LOC147804|147804|tropomyosin 3 pseudogene	0.991907	CTCF.p2:0:0.992
chr15	32732660	32732801	reg1008363.p1	11.143	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-409987	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-569787	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-569901	-	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	175032	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	201184	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	277527	+	AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1	1.164897	CTCF.p2:-1:1.000
chr8	136464732	136464853	reg1010601.p1	11.143	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-739518	-	TSC_hg19_v1_chr8_-_135725053 AB463359	-739713	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	-755998	-	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	4866	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	5409	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	3044314	-	BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B	0.27818	CTCF.p2:0:0.278
chrY	59349493	59349623	reg1010835.p1	11.143	+	M84747 NM_002186 AK303178 BC025298 BC051337 S71404 CU690808	-19211	+	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	-135561	+	AK289543 AK311508 NM_005840 AK125483	-249118	+	None	None	None	None	None	None	None	None	None	M84747|IL9R|3581|interleukin 9 receptor##NM_002186|IL9R|3581|interleukin 9 receptor##AK303178|IL9R|3581|interleukin 9 receptor##BC025298|IL9R|3581|interleukin 9 receptor##BC051337|IL9R|3581|interleukin 9 receptor##S71404|IL9R|3581|interleukin 9 receptor##NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7##AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)	0.637007	CTCF.p2:11:0.637
chr10	73715984	73716091	reg1009078.p1	11.142	+	TSC_hg19_v1_chr10_-_73611059 NM_001042465 NM_001042466 NM_002778	-104946	-	AK299184 TSC_hg19_v1_chr10_-_73611043	-104994	-	AK223290 AK293672 AK307721 TSC_hg19_v1_chr10_-_73611007 AK129790 J03077 AK057878 BC091483	-105020	-	TSC_hg19_v1_chr10_+_73723993 AB017915 NM_004273 AB012192	8020	+	AK292328 TSC_hg19_v1_chr10_-_73848270 AK294008 AK307091	132231	-	TSC_hg19_v1_chr10_-_73848286 AY358921	132245	-	NM_001042465|PSAP|5660|prosaposin##NM_001042466|PSAP|5660|prosaposin##NM_002778|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin##AK223290|PSAP|5660|prosaposin##AK293672|PSAP|5660|prosaposin##AK307721|PSAP|5660|prosaposin##AK129790|PSAP|5660|prosaposin##J03077|PSAP|5660|prosaposin##AK057878|PSAP|5660|prosaposin##BC091483|PSAP|5660|prosaposin##AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AY358921|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	0.694154	CTCF.p2:-11:0.694
chr13	30689251	30689383	reg1008580.p1	11.141	+	TSC_hg19_v1_chr13_-_30424811 NM_007106	-264476	-	TSC_hg19_v1_chr13_-_30424719 AK056580	-264615	-	BC059385 BC044582 TSC_hg19_v1_chr13_-_30424481	-264911	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	191834	-	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	192252	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	350676	-	NM_007106|UBL3|5412|ubiquitin-like 3##AK056580|UBL3|5412|ubiquitin-like 3##BC059385|UBL3|5412|ubiquitin-like 3##BC044582|UBL3|5412|ubiquitin-like 3##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1	0.955028	CTCF.p2:-3:0.955
chr3	143393318	143393437	reg1004805.p2	11.141	+	BC067737 TSC_hg19_v1_chr3_+_142895211	-498206	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-554726	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-672947	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	173890	-	NM_173552 AK315082	297275	+	TSC_hg19_v1_chr3_+_143690915 BC037293	297613	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58	0.0	
chr6_cox_hap2	2847464	2847588	reg1009512.p2	11.141	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.012206	CTCF.p2:7:1.000
chr7	33004448	33004566	reg1008670.p2	11.141	+	TSC_hg19_v1_chr7_+_32997051 NM_007270 AK075331 AK128597 AK300328 AK293954 AK294266 BC101723 BC112053 AF089745	-7355	+	AF274938 TSC_hg19_v1_chr7_-_32982789 BC050570 BC036907	-21803	-	TSC_hg19_v1_chr7_-_32931481 NM_015483	-73056	-	BC015856 NM_001166118 NM_016489	76012	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	97815	-	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	144470	-	NM_007270|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK075331|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK128597|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK300328|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK293954|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK294266|FKBP9|11328|FK506 binding protein 9, 63 kDa##BC101723|FKBP9|11328|FK506 binding protein 9, 63 kDa##BC112053|FKBP9|11328|FK506 binding protein 9, 63 kDa##AF089745|FKBP9|11328|FK506 binding protein 9, 63 kDa##AF274938|RP9P|441212|retinitis pigmentosa 9 pseudogene##BC050570|RP9P|441212|retinitis pigmentosa 9 pseudogene##BC036907|RP9P|441212|retinitis pigmentosa 9 pseudogene##NM_015483|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##BC015856|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001166118|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_016489|NT5C3|51251|5'-nucleotidase, cytosolic III##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)	0.15934	
chr17	38136799	38136941	reg1010303.p1	11.140	+	AK096439 NM_178171 BC109197	-17626	+	NM_001195545	-39144	+	TSC_hg19_v1_chr17_-_38083855 AF373101 BC071833 AX775843 AK075212 BC017087 AF395708 AF373102 AK074811 NM_139280	-53038	-	TSC_hg19_v1_chr17_+_38137059 AK054611 AK094206 AK293539 AK300973 NM_002809 BC001684 BC012302	195	+	D67025 TSC_hg19_v1_chr17_+_38137082	211	+	AK055799 AK300081 TSC_hg19_v1_chr17_+_38137088	218	+	AK096439|GSDMA|284110|gasdermin A##NM_178171|GSDMA|284110|gasdermin A##BC109197|GSDMA|284110|gasdermin A##NM_001195545|LRRC3C|100505591|leucine rich repeat containing 3C##AF373101|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC071833|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AX775843|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK075212|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC017087|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF395708|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF373102|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK074811|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##NM_139280|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK054611|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK094206|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK293539|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK300973|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##NM_002809|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC012302|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##D67025|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK055799|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK300081|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	0.0	
chr2	74627121	74627262	reg1010600.p1	11.140	+	TSC_hg19_v1_chr2_-_74619172 NM_001190836	-8019	-	TSC_hg19_v1_chr2_-_74618983 BX647972	-8206	-	TSC_hg19_v1_chr2_-_74618975 BX647925	-8217	-	NM_001145054	17652	-	AK023015 AK222696 TSC_hg19_v1_chr2_+_74648856 BC032428 AK311621 BC051848 NM_032118 BC051753	21683	+	TSC_hg19_v1_chr2_-_74667581 AK307302 AF290512 NM_001015056 NM_033046	40440	-	NM_001190836|DCTN1|1639|dynactin 1##BX647972|DCTN1|1639|dynactin 1##BX647925|DCTN1|1639|dynactin 1##NM_001145054|C2orf81|388963|chromosome 2 open reading frame 81##AK023015|WDR54|84058|WD repeat domain 54##AK222696|WDR54|84058|WD repeat domain 54##BC032428|WDR54|84058|WD repeat domain 54##AK311621|WDR54|84058|WD repeat domain 54##BC051848|WDR54|84058|WD repeat domain 54##NM_032118|WDR54|84058|WD repeat domain 54##BC051753|WDR54|84058|WD repeat domain 54##AK307302|RTKN|6242|rhotekin##AF290512|RTKN|6242|rhotekin##NM_001015056|RTKN|6242|rhotekin##NM_033046|RTKN|6242|rhotekin	0.0	
chr1	152319745	152319864	reg1010495.p1	11.138	+	L01090 NM_002016	-22126	-	AB180729 NM_001009931 AY396741	-123135	-	CR933683 TSC_hg19_v1_chr1_+_152161805	-158009	+	AY827490 NM_001014342	12677	-	AF077831 AK291301 AK298640 AK316568 BC030807 NM_016190	66934	-	NM_178438	163515	+	L01090|FLG|2312|filaggrin##NM_002016|FLG|2312|filaggrin##AB180729|HRNR|388697|hornerin##NM_001009931|HRNR|388697|hornerin##AY396741|HRNR|388697|hornerin##AY827490|FLG2|388698|filaggrin family member 2##NM_001014342|FLG2|388698|filaggrin family member 2##AF077831|CRNN|49860|cornulin##AK291301|CRNN|49860|cornulin##AK298640|CRNN|49860|cornulin##AK316568|CRNN|49860|cornulin##BC030807|CRNN|49860|cornulin##NM_016190|CRNN|49860|cornulin##NM_178438|LCE5A|254910|late cornified envelope 5A	0.270235	CTCF.p2:-5:0.270
chr16	71392492	71392637	reg1008134.p2	11.138	+	BC034468 TSC_hg19_v1_chr16_-_71323306 AK226169 BX648660 AK315056 NM_001099642 AK123343 AF458590 NM_018348 BC035005	-69263	-	AK000289 TSC_hg19_v1_chr16_-_71318858	-73754	-	TSC_hg19_v1_chr16_-_71264605 BC028351 AK299016 AK299348 NM_001198542 NM_001198543	-127950	-	NM_001740 NM_007088 AK222495 AK222648 AK291096 TSC_hg19_v1_chr16_+_71392625	57	+	TSC_hg19_v1_chr16_+_71392648 BC015484 X56667	80	+	TSC_hg19_v1_chr16_-_71496127 AF507946 BC007256 NM_145911 BC048974 AK091039 AX746746 AK297130	103557	-	BC034468|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK226169|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BX648660|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK315056|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_001099642|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AF458590|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_018348|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BC035005|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK000289|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BC028351|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK299016|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK299348|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001198542|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001198543|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001740|CALB2|794|calbindin 2##NM_007088|CALB2|794|calbindin 2##AK222495|CALB2|794|calbindin 2##AK222648|CALB2|794|calbindin 2##AK291096|CALB2|794|calbindin 2##BC015484|CALB2|794|calbindin 2##X56667|CALB2|794|calbindin 2##AF507946|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC007256|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_145911|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC048974|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK091039|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK297130|ZNF23|7571|zinc finger protein 23 (KOX 16)	0.984021	CTCF.p2:-3:0.984
chr17	48075718	48075849	reg1008623.p2	11.138	+	BC012361 BC028970 AK075167 TSC_hg19_v1_chr17_-_48072589 AK313257 NM_005220	-3205	-	NM_001934 U73328	-25654	+	U31762 TSC_hg19_v1_chr17_+_48049688	-26100	+	AK293323 AK303384 NM_002204 NM_005501 TSC_hg19_v1_chr17_+_48133350	57558	+	TSC_hg19_v1_chr17_+_48133357 AB209658 BC150190 BC015344	57663	+	AK055119 NM_001199898	96317	+	BC012361|DLX3|1747|distal-less homeobox 3##BC028970|DLX3|1747|distal-less homeobox 3##AK075167|DLX3|1747|distal-less homeobox 3##AK313257|DLX3|1747|distal-less homeobox 3##NM_005220|DLX3|1747|distal-less homeobox 3##NM_001934|DLX4|1748|distal-less homeobox 4##U73328|DLX4|1748|distal-less homeobox 4##U31762|DLX4|1748|distal-less homeobox 4##AK293323|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AK303384|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##NM_002204|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##NM_005501|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AB209658|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC150190|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC015344|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AK055119|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199898|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2	0.999509	CTCF.p2:-6:1.000
chr8	12046198	12046323	reg1011092.p1	11.138	+	AY509884 NM_201402	-49992	-	BC110823 NM_001039615	-99414	+	DQ012022 NM_001037804 NM_001195257	-117005	-	AK309984 BC062615 BC072459 BC098427 BC048297 AK098138 AK308513 AK297741 AK308439 BC085016 NM_001083537 AK291001 AK298940	5327	-	DQ012022 NM_001037804 NM_001195257	129564	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	247583	-	AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##NM_201402|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC110823|ZNF705D|728957|zinc finger protein 705D##NM_001039615|ZNF705D|728957|zinc finger protein 705D##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##BC062615|FAM86B1|85002|family with sequence similarity 86, member B1##BC098427|FAM86B1|85002|family with sequence similarity 86, member B1##BC048297|FAM86B1|85002|family with sequence similarity 86, member B1##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##NM_001083537|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1	0.993599	CTCF.p2:-1:0.994
chr2	19065505	19065609	reg1010203.p1	11.137	+	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	-294747	-	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	-323641	-	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	-1005603	+	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	492822	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	1003078	+	TSC_hg19_v1_chr2_-_20101456 BC050088	1035871	-	AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946	0.967331	CTCF.p2:1:0.967
chr2	214018500	214018647	reg1007679.p1	11.137	+	BC028936 NM_001079526	-2241	-	AK301503 AF130863 NM_016260	-3518	-	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	-615258	-	AK124960 NM_001242575	130355	-	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	130584	+	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	1257887	+	BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451##BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	0.917496	CTCF.p2:11:0.917
chr22	46259913	46260033	reg1009685.p1	11.137	+	CR456568 TSC_hg19_v1_chr22_+_46067931 AK095309 CR457381 DQ893240 DQ896570	-192056	+	AK025734 TSC_hg19_v1_chr22_+_46067746 AF119662 BC007508	-192217	+	TSC_hg19_v1_chr22_+_46067733 AF086923 AL050282	-192244	+	AF416743 NM_058238 TSC_hg19_v1_chr22_-_46373045	113056	-	TSC_hg19_v1_chr22_+_46449736 BC036832	189751	+	AB528792 AK001807 NM_018280 TSC_hg19_v1_chr22_-_46450052	190039	-	CR456568|ATXN10|25814|ataxin 10##AK095309|ATXN10|25814|ataxin 10##CR457381|ATXN10|25814|ataxin 10##DQ893240|ATXN10|25814|ataxin 10##DQ896570|ATXN10|25814|ataxin 10##AK025734|ATXN10|25814|ataxin 10##AF119662|ATXN10|25814|ataxin 10##BC007508|ATXN10|25814|ataxin 10##AF086923|ATXN10|25814|ataxin 10##AL050282|ATXN10|25814|ataxin 10##AF416743|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_058238|WNT7B|7477|wingless-type MMTV integration site family, member 7B##AK001807|C22orf26|55267|chromosome 22 open reading frame 26##NM_018280|C22orf26|55267|chromosome 22 open reading frame 26	0.71349	CTCF.p2:1:0.713
chr3	182840246	182840373	reg1007894.p1	11.137	+	BC036395 TSC_hg19_v1_chr3_-_182833987	-6386	-	AK295293 TSC_hg19_v1_chr3_-_182817343 AK023051 AB029826 AF310339 BC004187 BC004214 AF310972 NM_020166	-22959	-	AB587379 CU678606 TSC_hg19_v1_chr3_-_182817309 CR749608 AK316428 AB209737 AL442091 AK294882	-23028	-	TSC_hg19_v1_chr3_-_182880435 DQ892118	40130	-	TSC_hg19_v1_chr3_-_182880523 AB013924 AK313172 BC032940 NM_014398	40255	-	TSC_hg19_v1_chr3_+_182970969 NM_032047 AK074424	130639	+	BC036395|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK295293|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK023051|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AB029826|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AF310339|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##BC004187|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##BC004214|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AF310972|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##NM_020166|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##CR749608|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK316428|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AB209737|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AL442091|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK294882|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##DQ892118|LAMP3|27074|lysosomal-associated membrane protein 3##AB013924|LAMP3|27074|lysosomal-associated membrane protein 3##AK313172|LAMP3|27074|lysosomal-associated membrane protein 3##BC032940|LAMP3|27074|lysosomal-associated membrane protein 3##NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3##NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	0.898151	CTCF.p2:9:0.898
chr3	39748956	39749075	reg1010821.p1	11.137	+	NM_182935 BC075796 AK127034 AK290187 BC022471	-239896	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	-299873	+	BC070263 NM_002295 TSC_hg19_v1_chr3_+_39448210 BC066941 BC107567 BC005391 BC062714 D28372 AF503367 BC013827 BC050688 X15005 BC034537 BC053370 BC071968 BC010418 BC071693 BC018867 BC071969 BC073863	-300805	+	TSC_hg19_v1_chr3_+_39851138 BC092512 AK126013 AF396687 NM_015460 BC109311 BC109312	102160	+	BC031275 AK057627 AK309874 AK309698 TSC_hg19_v1_chr3_-_40351022 BC045736 BC118565 BC106900	602053	-	NM_005875 TSC_hg19_v1_chr3_+_40351187 AK223448 BC006996 AF077052	602165	+	NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA##BC070263|RPSA|3921|ribosomal protein SA##NM_002295|RPSA|3921|ribosomal protein SA##BC066941|RPSA|3921|ribosomal protein SA##BC107567|RPSA|3921|ribosomal protein SA##BC005391|RPSA|3921|ribosomal protein SA##BC062714|RPSA|3921|ribosomal protein SA##AF503367|RPSA|3921|ribosomal protein SA##BC013827|RPSA|3921|ribosomal protein SA##BC050688|RPSA|3921|ribosomal protein SA##X15005|RPSA|3921|ribosomal protein SA##BC034537|RPSA|3921|ribosomal protein SA##BC053370|RPSA|3921|ribosomal protein SA##BC071968|RPSA|3921|ribosomal protein SA##BC010418|RPSA|3921|ribosomal protein SA##BC071693|RPSA|3921|ribosomal protein SA##BC018867|RPSA|3921|ribosomal protein SA##BC071969|RPSA|3921|ribosomal protein SA##BC073863|RPSA|3921|ribosomal protein SA##BC092512|MYRIP|25924|myosin VIIA and Rab interacting protein##AK126013|MYRIP|25924|myosin VIIA and Rab interacting protein##AF396687|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_015460|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109311|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109312|MYRIP|25924|myosin VIIA and Rab interacting protein##BC031275|FLJ33065|440952|uncharacterized LOC440952##AK057627|FLJ33065|440952|uncharacterized LOC440952##AK309874|FLJ33065|440952|uncharacterized LOC440952##BC045736|FLJ33065|440952|uncharacterized LOC440952##BC118565|FLJ33065|440952|uncharacterized LOC440952##BC106900|FLJ33065|440952|uncharacterized LOC440952##NM_005875|EIF1B|10289|eukaryotic translation initiation factor 1B##AK223448|EIF1B|10289|eukaryotic translation initiation factor 1B##BC006996|EIF1B|10289|eukaryotic translation initiation factor 1B##AF077052|EIF1B|10289|eukaryotic translation initiation factor 1B	0.560852	CTCF.p2:-13:0.561
chr10	60712566	60712670	reg1005657.p1	11.136	+	TSC_hg19_v1_chr10_+_60272869 NM_001080512 AY726586	-439706	+	BC029815 TSC_hg19_v1_chr10_+_60145169 AK312558 M62810 NM_003201 BC018628 BC104482 BC126366 EU279428 HQ258758 AB451241 AB451366 AB464302 BT019658 BT019659 CR407653	-567413	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	-617782	+	TSC_hg19_v1_chr10_-_60936189 AK055418	223588	-	AL834339 NM_032439 TSC_hg19_v1_chr10_+_60936408 CR749429	223770	+	BC011268 AK054956 TSC_hg19_v1_chr10_+_60936573 AB384640 AM392743	223942	+	NM_001080512|BICC1|80114|bicaudal C homolog 1 (Drosophila)##AY726586|BICC1|80114|bicaudal C homolog 1 (Drosophila)##BC029815|TFAM|7019|transcription factor A, mitochondrial##AK312558|TFAM|7019|transcription factor A, mitochondrial##M62810|TFAM|7019|transcription factor A, mitochondrial##NM_003201|TFAM|7019|transcription factor A, mitochondrial##BC018628|TFAM|7019|transcription factor A, mitochondrial##BC104482|TFAM|7019|transcription factor A, mitochondrial##BC126366|TFAM|7019|transcription factor A, mitochondrial##EU279428|TFAM|7019|transcription factor A, mitochondrial##HQ258758|TFAM|7019|transcription factor A, mitochondrial##AB451241|TFAM|7019|transcription factor A, mitochondrial##AB451366|TFAM|7019|transcription factor A, mitochondrial##BT019658|TFAM|7019|transcription factor A, mitochondrial##BT019659|TFAM|7019|transcription factor A, mitochondrial##CR407653|TFAM|7019|transcription factor A, mitochondrial##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	0.974198	CTCF.p2:-2:0.974
chr6	64722267	64722384	reg1008047.p1	11.136	+	AF091622 BC113650 BC113652 NM_015153 D87685 AB385299	-365883	+	TSC_hg19_v1_chr6_+_64346027 BX648268 AK290491	-376308	+	TSC_hg19_v1_chr6_+_64345729 AK315868 AK298580	-376502	+	AY358133 NM_198283 AK310478	1567380	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	1694768	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	3876703	-	AF091622|PHF3|23469|PHD finger protein 3##BC113650|PHF3|23469|PHD finger protein 3##BC113652|PHF3|23469|PHD finger protein 3##NM_015153|PHF3|23469|PHD finger protein 3##D87685|PHF3|23469|PHD finger protein 3##BX648268|PHF3|23469|PHD finger protein 3##AK290491|PHF3|23469|PHD finger protein 3##AK315868|PHF3|23469|PHD finger protein 3##AK298580|PHF3|23469|PHD finger protein 3##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3	0.974883	CTCF.p2:-4:0.975
chr1	27995767	27995895	reg1010979.p1	11.135	+	TSC_hg19_v1_chr1_-_27961656 BC064382 AK130188 NM_005248	-34145	-	M27454 AK301078 BC002836 AK304846 NM_001042729	-42756	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	-43161	-	TSC_hg19_v1_chr1_-_27998690 X02492 BC011601 BC015603	2846	-	TSC_hg19_v1_chr1_-_27998704 AK024814 AK314488	2878	-	TSC_hg19_v1_chr1_-_27998734 NM_002038 NM_022872 NM_022873	2908	-	BC064382|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK130188|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_005248|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##M27454|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK301078|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042729|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##X02492|IFI6|2537|interferon, alpha-inducible protein 6##BC011601|IFI6|2537|interferon, alpha-inducible protein 6##BC015603|IFI6|2537|interferon, alpha-inducible protein 6##AK024814|IFI6|2537|interferon, alpha-inducible protein 6##AK314488|IFI6|2537|interferon, alpha-inducible protein 6##NM_002038|IFI6|2537|interferon, alpha-inducible protein 6##NM_022872|IFI6|2537|interferon, alpha-inducible protein 6##NM_022873|IFI6|2537|interferon, alpha-inducible protein 6	0.53262	CTCF.p2:-4:0.533
chr2	181942000	181942120	reg1007976.p2	11.135	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-96233	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-96417	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-96690	+	NM_000885	379558	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	379990	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	380262	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.940823	CTCF.p2:-11:0.941
chr7	19091546	19091651	reg1008737.p1	11.134	+	TSC_hg19_v1_chr7_+_18548965 AK304343	-542629	+	NM_001204147 NM_001204148 TSC_hg19_v1_chr7_+_18548932 AK304410	-542675	+	CR749550 EU832154 EU832248 TSC_hg19_v1_chr7_+_18535882 NM_058176 NM_178425 AB385379 AY032737 AY032738 AY197371 EU832247 BC111735	-555727	+	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	65680	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	93415	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	657048	-	AK304343|HDAC9|9734|histone deacetylase 9##NM_001204147|HDAC9|9734|histone deacetylase 9##NM_001204148|HDAC9|9734|histone deacetylase 9##AK304410|HDAC9|9734|histone deacetylase 9##CR749550|HDAC9|9734|histone deacetylase 9##EU832154|HDAC9|9734|histone deacetylase 9##EU832248|HDAC9|9734|histone deacetylase 9##NM_058176|HDAC9|9734|histone deacetylase 9##NM_178425|HDAC9|9734|histone deacetylase 9##AY032737|HDAC9|9734|histone deacetylase 9##AY032738|HDAC9|9734|histone deacetylase 9##AY197371|HDAC9|9734|histone deacetylase 9##EU832247|HDAC9|9734|histone deacetylase 9##BC111735|HDAC9|9734|histone deacetylase 9##BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor	0.978324	CTCF.p2:-5:0.978
chr10	98479679	98479820	reg1010478.p2	11.133	+	TSC_hg19_v1_chr10_-_98346798 AF269150 BC136788 BC136789 BC144412 NM_020123	-132926	-	TSC_hg19_v1_chr10_-_98346770 AK314348	-132971	-	TSC_hg19_v1_chr10_-_98346739 AF160213	-133077	-	BX648550 TSC_hg19_v1_chr10_-_98480272 AK125635 NM_152309	492	-	TSC_hg19_v1_chr10_+_98592020 NM_001170765 NM_001170766 AL832106 AK308356 BC053359	112304	+	TSC_hg19_v1_chr10_-_98592186 AB593180	112451	-	AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3##BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3##AK314348|TM9SF3|56889|transmembrane 9 superfamily member 3##AF160213|TM9SF3|56889|transmembrane 9 superfamily member 3##BX648550|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AK125635|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_152309|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor##AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor##BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor	0.074418	
chr12	10923881	10923995	reg1009806.p1	11.133	+	TSC_hg19_v1_chr12_-_10875923 X95325 BC015913 BC015564 BC021926 BC009744 M24069 BC008801 X72712 AK314846 NM_001145426 NM_003651	-48037	-	TSC_hg19_v1_chr12_-_10875782 AB463536 DQ892686 DQ895930	-48196	-	AF251059 NM_018423	-97048	-	BC069091 AB529261 BC093992 BC113561 NM_023919	31258	-	BC069084 BC069551 BC096701 BC096735 BC098167 BC098353 NM_023918 AB529262 CU686904	35640	-	BC069066 AB529263 BC095519 NM_023917	38781	-	X95325|CSDA|8531|cold shock domain protein A##BC015913|CSDA|8531|cold shock domain protein A##BC015564|CSDA|8531|cold shock domain protein A##BC021926|CSDA|8531|cold shock domain protein A##BC009744|CSDA|8531|cold shock domain protein A##M24069|CSDA|8531|cold shock domain protein A##BC008801|CSDA|8531|cold shock domain protein A##X72712|CSDA|8531|cold shock domain protein A##AK314846|CSDA|8531|cold shock domain protein A##NM_001145426|CSDA|8531|cold shock domain protein A##NM_003651|CSDA|8531|cold shock domain protein A##DQ892686|CSDA|8531|cold shock domain protein A##DQ895930|CSDA|8531|cold shock domain protein A##AF251059|STYK1|55359|serine/threonine/tyrosine kinase 1##NM_018423|STYK1|55359|serine/threonine/tyrosine kinase 1##BC069091|TAS2R7|50837|taste receptor, type 2, member 7##BC093992|TAS2R7|50837|taste receptor, type 2, member 7##BC113561|TAS2R7|50837|taste receptor, type 2, member 7##NM_023919|TAS2R7|50837|taste receptor, type 2, member 7##BC069084|TAS2R8|50836|taste receptor, type 2, member 8##BC069551|TAS2R8|50836|taste receptor, type 2, member 8##BC096701|TAS2R8|50836|taste receptor, type 2, member 8##BC096735|TAS2R8|50836|taste receptor, type 2, member 8##BC098167|TAS2R8|50836|taste receptor, type 2, member 8##BC098353|TAS2R8|50836|taste receptor, type 2, member 8##NM_023918|TAS2R8|50836|taste receptor, type 2, member 8##BC069066|TAS2R9|50835|taste receptor, type 2, member 9##BC095519|TAS2R9|50835|taste receptor, type 2, member 9##NM_023917|TAS2R9|50835|taste receptor, type 2, member 9	0.039525	
chr12	115063133	115063251	reg1007753.p2	11.133	+	AB051068 AF221714 NM_000192 NM_080717 Y09445	-216974	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-219268	-	NM_080718 U80987 U89353 AB527531 EU446658	-221488	-	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	58948	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	1651758	-	TSC_hg19_v1_chr12_-_116715263 AY338463	1651968	-	AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5##AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like	0.99865	CTCF.p2:-5:0.999
chr13	76270062	76270179	reg1009038.p1	11.133	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-59650	+	AF330045 NM_005358	-75551	+	TSC_hg19_v1_chr13_+_76123890 AK313665 BC018125 NM_006002 M30496 CU676190 BT019359 CR456855	-146196	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	64720	+	BC013764 TSC_hg19_v1_chr13_-_77460431	1190280	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	1190487	-	AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##AK313665|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BC018125|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_006002|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##M30496|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BT019359|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##CR456855|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12	0.999556	CTCF.p2:21:1.000
chr22	25025177	25025322	reg1011417.p1	11.133	+	TSC_hg19_v1_chr22_+_25003637 NM_001032365	-21626	+	AL832738 TSC_hg19_v1_chr22_+_24999158 NM_001032364 BC035341 NM_005265 L20494 J04131	-26056	+	TSC_hg19_v1_chr22_-_24989036 BC032388 BC108684 NM_207644 AK097054	-36237	-	AB079368 NM_001008496 AK302409 AK315806	145435	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	176961	+	BC130647 BC130649 CR456388 NM_001001663	310063	-	NM_001032365|GGT1|2678|gamma-glutamyltransferase 1##AL832738|GGT1|2678|gamma-glutamyltransferase 1##NM_001032364|GGT1|2678|gamma-glutamyltransferase 1##BC035341|GGT1|2678|gamma-glutamyltransferase 1##NM_005265|GGT1|2678|gamma-glutamyltransferase 1##L20494|GGT1|2678|gamma-glutamyltransferase 1##J04131|GGT1|2678|gamma-glutamyltransferase 1##BC032388|FAM211B|388886|family with sequence similarity 211, member B##BC108684|FAM211B|388886|family with sequence similarity 211, member B##NM_207644|FAM211B|388886|family with sequence similarity 211, member B##AK097054|FAM211B|388886|family with sequence similarity 211, member B##AB079368|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001008496|PIWIL3|440822|piwi-like 3 (Drosophila)##AK302409|PIWIL3|440822|piwi-like 3 (Drosophila)##AK315806|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211	1.012352	CTCF.p2:-17:0.999
chr3	69720360	69720484	reg1009962.p1	11.133	+	TSC_hg19_v1_chr3_-_69591738 AK091076	-128665	-	NM_015123 BC057836	-284981	-	AB023230 TSC_hg19_v1_chr3_-_69435240	-285191	-	TSC_hg19_v1_chr3_+_69788632 NM_198159 AK291318 AL110195 AB006909 AB527520	68231	+	TSC_hg19_v1_chr3_+_69812620 AK296129 NM_001184967	92241	+	AB006988 NM_006722	92539	+	AK091076|FRMD4B|23150|FERM domain containing 4B##NM_015123|FRMD4B|23150|FERM domain containing 4B##BC057836|FRMD4B|23150|FERM domain containing 4B##AB023230|FRMD4B|23150|FERM domain containing 4B##NM_198159|MITF|4286|microphthalmia-associated transcription factor##AK291318|MITF|4286|microphthalmia-associated transcription factor##AL110195|MITF|4286|microphthalmia-associated transcription factor##AB006909|MITF|4286|microphthalmia-associated transcription factor##AK296129|MITF|4286|microphthalmia-associated transcription factor##NM_001184967|MITF|4286|microphthalmia-associated transcription factor##AB006988|MITF|4286|microphthalmia-associated transcription factor##NM_006722|MITF|4286|microphthalmia-associated transcription factor	0.988052	CTCF.p2:17:0.988
chr4	48089247	48089372	reg1007754.p1	11.133	+	TSC_hg19_v1_chr4_+_48018788 BC067881 CR749484 NM_207330 AK095299	-70506	+	X64802 TSC_hg19_v1_chr4_-_48018662	-70672	-	AK292021 NM_000087	-74349	-	BC017829 L27071 NM_003328	46949	-	BC101711 BC101713 BC143487 NM_003215 TSC_hg19_v1_chr4_-_48271858	182526	-	BC040993 TSC_hg19_v1_chr4_+_48343485 AK291006	254102	+	BC067881|NIPAL1|152519|NIPA-like domain containing 1##CR749484|NIPAL1|152519|NIPA-like domain containing 1##NM_207330|NIPAL1|152519|NIPA-like domain containing 1##AK095299|NIPAL1|152519|NIPA-like domain containing 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1##AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1##BC017829|TXK|7294|TXK tyrosine kinase##L27071|TXK|7294|TXK tyrosine kinase##NM_003328|TXK|7294|TXK tyrosine kinase##BC101711|TEC|7006|tec protein tyrosine kinase##BC101713|TEC|7006|tec protein tyrosine kinase##BC143487|TEC|7006|tec protein tyrosine kinase##NM_003215|TEC|7006|tec protein tyrosine kinase##BC040993|SLAIN2|57606|SLAIN motif family, member 2##AK291006|SLAIN2|57606|SLAIN motif family, member 2	0.972287	CTCF.p2:29:0.972
chrX	107020506	107020639	reg1008101.p2	11.133	+	TSC_hg19_v1_chrX_-_107019012 NM_198057	-1564	-	AK300535 TSC_hg19_v1_chrX_-_107018990 AK092669 AX747661	-1633	-	AF153603 AF228339 AB025432 AF183393 BC072446 TSC_hg19_v1_chrX_-_106960293 AL110191 NM_004089 CR933650	-60291	-	TSC_hg19_v1_chrX_+_107069107 NM_012216 NM_052817	48531	+	Y18880 TSC_hg19_v1_chrX_+_107069473	48895	+	TSC_hg19_v1_chrX_+_107069526 AF196481	49000	+	NM_198057|TSC22D3|1831|TSC22 domain family, member 3##AK300535|TSC22D3|1831|TSC22 domain family, member 3##AK092669|TSC22D3|1831|TSC22 domain family, member 3##AF153603|TSC22D3|1831|TSC22 domain family, member 3##AF228339|TSC22D3|1831|TSC22 domain family, member 3##AB025432|TSC22D3|1831|TSC22 domain family, member 3##AF183393|TSC22D3|1831|TSC22 domain family, member 3##BC072446|TSC22D3|1831|TSC22 domain family, member 3##AL110191|TSC22D3|1831|TSC22 domain family, member 3##NM_004089|TSC22D3|1831|TSC22 domain family, member 3##CR933650|TSC22D3|1831|TSC22 domain family, member 3##NM_012216|MID2|11043|midline 2##NM_052817|MID2|11043|midline 2##Y18880|MID2|11043|midline 2##AF196481|MID2|11043|midline 2	1.045028	CTCF.p2:13:0.999
chr14	36539783	36539922	reg1009241.p1	11.132	+	TSC_hg19_v1_chr14_+_36295599 NM_032352 AY827074 BC006250 AK297106 AK310359 AK315424	-244249	+	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	-261457	-	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	-261705	-	AB463855 CU677729 BX248287 TSC_hg19_v1_chr14_-_36789806 AF208857 BC016821 AK293473 BC005197 AB038523 AK315290 NM_001144891 NM_016586	249992	-	TSC_hg19_v1_chr14_-_36982983 BC042093 NM_001101341	443130	-	NM_003317 U33749	449050	-	NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BX248287|MBIP|51562|MAP3K12 binding inhibitory protein 1##AF208857|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC016821|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK293473|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC005197|MBIP|51562|MAP3K12 binding inhibitory protein 1##AB038523|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK315290|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_001144891|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_016586|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC042093|SFTA3|253970|surfactant associated 3##NM_001101341|SFTA3|253970|surfactant associated 3##NM_003317|NKX2-1|7080|NK2 homeobox 1##U33749|NKX2-1|7080|NK2 homeobox 1	0.993418	CTCF.p2:-3:0.993
chr1	71151110	71151224	reg1010791.p1	11.131	+	TSC_hg19_v1_chr1_+_70876950 NM_001190463 NM_001902 NM_153742 AK310269 AK303946 AK223376 BC015807 S52028 S52784 EU832313 EU832398 BT006882	-274187	+	TSC_hg19_v1_chr1_+_70820493 NM_001031693 NM_001036645 NM_001036646 AF126164 BC010922 AF126163	-330590	+	TSC_hg19_v1_chr1_-_70820406 BC016937 BC028840 AL136717 NM_030816	-330762	-	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	362212	-	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	395540	-	NM_005455 NM_203350	395804	-	NM_001190463|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001902|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_153742|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK310269|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK303946|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK223376|CTH|1491|cystathionase (cystathionine gamma-lyase)##BC015807|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52028|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52784|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832313|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832398|CTH|1491|cystathionase (cystathionine gamma-lyase)##BT006882|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001031693|HHLA3|11147|HERV-H LTR-associating 3##NM_001036645|HHLA3|11147|HERV-H LTR-associating 3##NM_001036646|HHLA3|11147|HERV-H LTR-associating 3##AF126164|HHLA3|11147|HERV-H LTR-associating 3##BC010922|HHLA3|11147|HERV-H LTR-associating 3##AF126163|HHLA3|11147|HERV-H LTR-associating 3##BC016937|ANKRD13C|81573|ankyrin repeat domain 13C##BC028840|ANKRD13C|81573|ankyrin repeat domain 13C##AL136717|ANKRD13C|81573|ankyrin repeat domain 13C##NM_030816|ANKRD13C|81573|ankyrin repeat domain 13C##AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2	0.853709	CTCF.p2:1:0.822
chr18	9793	9903	reg1026615.p1	11.131	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr18_+_158556 NM_001037334 NM_005151 AK297605 AK315438 BC003556 AK095516	148682	+	TSC_hg19_v1_chr18_+_158587 U30888 AB528508 DQ890594 DQ893762 CU678498 BT007183	148794	+	TSC_hg19_v1_chr18_-_268046 AY573302 AY573303 CU679685 DQ892768 EU176747 AK225709 L36529 AK314755 AK225067 BC010381 NM_005131	258185	-	NM_001037334|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##NM_005151|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AK297605|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AK315438|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##BC003556|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AK095516|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##U30888|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##DQ890594|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##DQ893762|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##BT007183|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AY573302|THOC1|9984|THO complex 1##AY573303|THOC1|9984|THO complex 1##DQ892768|THOC1|9984|THO complex 1##EU176747|THOC1|9984|THO complex 1##AK225709|THOC1|9984|THO complex 1##L36529|THOC1|9984|THO complex 1##AK314755|THOC1|9984|THO complex 1##AK225067|THOC1|9984|THO complex 1##BC010381|THOC1|9984|THO complex 1##NM_005131|THOC1|9984|THO complex 1	0.0	
chr10	93149515	93149681	reg1007759.p2	11.130	+	TSC_hg19_v1_chr10_+_92980539 AL832496	-169064	+	TSC_hg19_v1_chr10_+_92980445 NM_032373	-169190	+	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	-226836	+	BC071762 TSC_hg19_v1_chr10_+_93170064	20460	+	TSC_hg19_v1_chr10_+_93170100 NM_173497 NM_182765 AK295723 AK094625 BC040187 EU832472 EU832551 BX537856	20583	+	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	243163	-	AL832496|PCGF5|84333|polycomb group ring finger 5##NM_032373|PCGF5|84333|polycomb group ring finger 5##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5##NM_173497|HECTD2|143279|HECT domain containing 2##NM_182765|HECTD2|143279|HECT domain containing 2##AK295723|HECTD2|143279|HECT domain containing 2##AK094625|HECTD2|143279|HECT domain containing 2##BC040187|HECTD2|143279|HECT domain containing 2##EU832472|HECTD2|143279|HECT domain containing 2##EU832551|HECTD2|143279|HECT domain containing 2##BX537856|HECTD2|143279|HECT domain containing 2##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C	0.994061	CTCF.p2:-34:0.994
chr12	113468875	113469004	reg1009933.p1	11.130	+	TSC_hg19_v1_chr12_+_113416323 NM_001032731 NM_002535 NM_016817 BC010625 BC053870 BC023637 AK292906 BC069052 BC049215 AK292796 M87284 M87434 AB590925 CU690608	-52599	+	AF063613 TSC_hg19_v1_chr12_+_113376306	-92599	+	TSC_hg19_v1_chr12_+_113376245 AK000608 NM_006187 BC113746 BC012015 AK292949	-92689	+	NM_004416 BC048216	26751	+	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	104473	-	AF086713 AB208935 AK294350 NM_001193520 NM_004658	105092	-	NM_001032731|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_002535|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_016817|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC010625|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC053870|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC023637|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292906|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC069052|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC049215|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292796|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87284|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87434|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AF063613|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##AK000608|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##NM_006187|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##BC113746|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##BC012015|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##AK292949|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)##BC048216|DTX1|1840|deltex homolog 1 (Drosophila)##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	0.996437	CTCF.p2:0:0.996
chr12	78393967	78394099	reg1007836.p1	11.130	+	NM_014903 AJ488201	-168901	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-934744	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-1121250	-	AK094616 NM_001135805	863739	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	864442	+	TSC_hg19_v1_chr12_+_79258517 BX647240	864503	+	NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I##BX647240|SYT1|6857|synaptotagmin I	0.888185	CTCF.p2:-16:0.888
chr16	19191338	19191481	reg1010372.p1	11.130	+	TSC_hg19_v1_chr16_+_19179561 NM_016524 BC004518 AF220560 AB527504 CU678742	-11658	+	TSC_hg19_v1_chr16_+_19125253 AK096327 NM_001034841	-66161	+	TSC_hg19_v1_chr16_+_19079232 AL136647 NM_001190983 BC043272	-112144	+	BC070101 NM_001105248 NM_001105249	230647	+	AY236494 NM_024780 BC038118 AK097718 BC027602 AK131202	276395	+	AY463154 BC014981 TSC_hg19_v1_chr16_-_19533421 AF306698 BC025273 BC001538 AF212862 BC012153 AK312912 NM_016641	341967	-	NM_016524|SYT17|51760|synaptotagmin XVII##BC004518|SYT17|51760|synaptotagmin XVII##AF220560|SYT17|51760|synaptotagmin XVII##AK096327|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##NM_001034841|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##AL136647|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_001190983|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC043272|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC070101|TMC5|79838|transmembrane channel-like 5##NM_001105248|TMC5|79838|transmembrane channel-like 5##NM_001105249|TMC5|79838|transmembrane channel-like 5##AY236494|TMC5|79838|transmembrane channel-like 5##NM_024780|TMC5|79838|transmembrane channel-like 5##BC038118|TMC5|79838|transmembrane channel-like 5##AK097718|TMC5|79838|transmembrane channel-like 5##BC027602|TMC5|79838|transmembrane channel-like 5##AK131202|TMC5|79838|transmembrane channel-like 5##AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1##NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1	0.88839	CTCF.p2:6:0.888
chr19	49474295	49474434	reg1010723.p1	11.130	+	TSC_hg19_v1_chr19_+_49468656 DQ892980 DQ896228 EU831925 EU832020 AB528331 CU678630 AY466472 CR456715	-5654	+	Y09188 BC018990 BC002991 TSC_hg19_v1_chr19_+_49468604 M11147	-5761	+	TSC_hg19_v1_chr19_+_49468565 AK026534 AK130191 AK131048 AK131050 AK307065 AK311773 AY207005 BC008439 BC008441 BC013928 BC016346 BC016354 BC016715 BC021670 BC058820 BC062708 NM_000146 BX571748 BC067772 AK130205 AK131053 BC004245	-5798	+	CU675761 CU678426 AB590881 TSC_hg19_v1_chr19_-_49496515 U32573	22078	-	TSC_hg19_v1_chr19_-_49496541 J04501 BC007688 BC002617	22170	-	TSC_hg19_v1_chr19_-_49496564 AK223579 AK291672 AK294349 AK300369 AK302738 AK303712	22200	-	DQ892980|FTL|2512|ferritin, light polypeptide##DQ896228|FTL|2512|ferritin, light polypeptide##EU831925|FTL|2512|ferritin, light polypeptide##EU832020|FTL|2512|ferritin, light polypeptide##AY466472|FTL|2512|ferritin, light polypeptide##CR456715|FTL|2512|ferritin, light polypeptide##Y09188|FTL|2512|ferritin, light polypeptide##BC018990|FTL|2512|ferritin, light polypeptide##BC002991|FTL|2512|ferritin, light polypeptide##M11147|FTL|2512|ferritin, light polypeptide##AK026534|FTL|2512|ferritin, light polypeptide##AK130191|FTL|2512|ferritin, light polypeptide##AK131048|FTL|2512|ferritin, light polypeptide##AK131050|FTL|2512|ferritin, light polypeptide##AK307065|FTL|2512|ferritin, light polypeptide##AK311773|FTL|2512|ferritin, light polypeptide##AY207005|FTL|2512|ferritin, light polypeptide##BC008439|FTL|2512|ferritin, light polypeptide##BC008441|FTL|2512|ferritin, light polypeptide##BC013928|FTL|2512|ferritin, light polypeptide##BC016346|FTL|2512|ferritin, light polypeptide##BC016354|FTL|2512|ferritin, light polypeptide##BC016715|FTL|2512|ferritin, light polypeptide##BC021670|FTL|2512|ferritin, light polypeptide##BC058820|FTL|2512|ferritin, light polypeptide##BC062708|FTL|2512|ferritin, light polypeptide##NM_000146|FTL|2512|ferritin, light polypeptide##BX571748|FTL|2512|ferritin, light polypeptide##BC067772|FTL|2512|ferritin, light polypeptide##AK130205|FTL|2512|ferritin, light polypeptide##AK131053|FTL|2512|ferritin, light polypeptide##BC004245|FTL|2512|ferritin, light polypeptide##U32573|GYS1|2997|glycogen synthase 1 (muscle)##J04501|GYS1|2997|glycogen synthase 1 (muscle)##BC007688|GYS1|2997|glycogen synthase 1 (muscle)##BC002617|GYS1|2997|glycogen synthase 1 (muscle)##AK223579|GYS1|2997|glycogen synthase 1 (muscle)##AK291672|GYS1|2997|glycogen synthase 1 (muscle)##AK294349|GYS1|2997|glycogen synthase 1 (muscle)##AK300369|GYS1|2997|glycogen synthase 1 (muscle)##AK302738|GYS1|2997|glycogen synthase 1 (muscle)##AK303712|GYS1|2997|glycogen synthase 1 (muscle)	0.996999	CTCF.p2:0:0.997
chr22	28996676	28996824	reg1008722.p2	11.130	+	TSC_hg19_v1_chr22_-_28315245 BC018704 D30037 AK313064 CR456541 NM_012399	-681486	-	TSC_hg19_v1_chr22_-_28315203 BC031427	-681543	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	-681576	-	TSC_hg19_v1_chr22_-_29075801 NM_001145418	79043	-	BC004207 AK289360 CR456418 NM_001005735 NM_007194 NM_145862 AK290754 AB164374	141067	-	BC000004 TSC_hg19_v1_chr22_+_29138056 NM_172002 BC065569 CR456462 AY191719 AB528150 CU013013 CU013301	141311	+	BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta##D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta##CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_001145418|TTC28|23331|tetratricopeptide repeat domain 28##BC004207|CHEK2|11200|checkpoint kinase 2##AK289360|CHEK2|11200|checkpoint kinase 2##CR456418|CHEK2|11200|checkpoint kinase 2##NM_001005735|CHEK2|11200|checkpoint kinase 2##NM_007194|CHEK2|11200|checkpoint kinase 2##NM_145862|CHEK2|11200|checkpoint kinase 2##AK290754|CHEK2|11200|checkpoint kinase 2##NM_172002|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##BC065569|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##CR456462|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##AY191719|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)	0.876837	CTCF.p2:-25:0.877
chr4	84412182	84412290	reg1008607.p1	11.130	+	BC016905 TSC_hg19_v1_chr4_-_84406254 EF531340 BC039573 AY358576 AK022704 AK023676 NM_139076	-5962	-	AK026620 NM_016067 AF151892 BC005186 TSC_hg19_v1_chr4_+_84377213 AK002008 CU675033	-35063	+	BC095473 BC011863 BC065814 BC111502 TSC_hg19_v1_chr4_-_84376999 AK308395 AF436845 AK312725 AK128665 BC015428 NM_133636	-35253	-	TSC_hg19_v1_chr4_+_84457260 AK055749 AK223543	45036	+	TSC_hg19_v1_chr4_+_84457420 DQ345298 BC090956 AY358100 NM_032717 DQ324782	45345	+	NM_006168	1007150	-	BC016905|FAM175A|84142|family with sequence similarity 175, member A##EF531340|FAM175A|84142|family with sequence similarity 175, member A##BC039573|FAM175A|84142|family with sequence similarity 175, member A##AY358576|FAM175A|84142|family with sequence similarity 175, member A##AK022704|FAM175A|84142|family with sequence similarity 175, member A##AK023676|FAM175A|84142|family with sequence similarity 175, member A##NM_139076|FAM175A|84142|family with sequence similarity 175, member A##AK026620|MRPS18C|51023|mitochondrial ribosomal protein S18C##NM_016067|MRPS18C|51023|mitochondrial ribosomal protein S18C##AF151892|MRPS18C|51023|mitochondrial ribosomal protein S18C##BC005186|MRPS18C|51023|mitochondrial ribosomal protein S18C##AK002008|MRPS18C|51023|mitochondrial ribosomal protein S18C##BC095473|HELQ|113510|helicase, POLQ-like##BC011863|HELQ|113510|helicase, POLQ-like##BC065814|HELQ|113510|helicase, POLQ-like##BC111502|HELQ|113510|helicase, POLQ-like##AK308395|HELQ|113510|helicase, POLQ-like##AF436845|HELQ|113510|helicase, POLQ-like##AK312725|HELQ|113510|helicase, POLQ-like##AK128665|HELQ|113510|helicase, POLQ-like##BC015428|HELQ|113510|helicase, POLQ-like##NM_133636|HELQ|113510|helicase, POLQ-like##AK055749|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK223543|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_006168|NKX6-1|4825|NK6 homeobox 1	0.609662	CTCF.p2:-4:0.610
chr10	70853151	70853283	reg1010621.p1	11.129	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	-5333	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	-5381	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-104682	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	30674	+	TSC_hg19_v1_chr10_+_70883933 BX649092 AK315496	30716	+	AK297142 TSC_hg19_v1_chr10_+_70883939	30723	+	D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_002727|SRGN|5552|serglycin##NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BX649092|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK315496|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK297142|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.999154	CTCF.p2:19:0.999
chr20	13100289	13100404	reg1008133.p1	11.129	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	-110705	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-1201789	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	-1228897	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	102077	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	519218	-	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	665195	-	BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)	0.999748	CTCF.p2:1:1.000
chr2	172455388	172455516	reg1008533.p1	11.129	+	TSC_hg19_v1_chr2_+_172379020 NM_001127383 NM_024843 AK128495 AK316588 AL136693 BC016900 AK291731 AK027115 AK225459 BC065290 HQ257890	-76497	+	AK301485 TSC_hg19_v1_chr2_+_172378762	-76693	+	TSC_hg19_v1_chr2_-_172374248 AB055776	-81206	-	TSC_hg19_v1_chr2_+_172543981 BX537412 AK055491 NM_001378 AK225759 BC091498 AY037160 AK308008 AK298561	88572	+	TSC_hg19_v1_chr2_+_172544264 AK096579 AK075323 AF250307 BC109375 AF134477 AK316119 BC015038	88839	+	AB527259 DQ891540 EU176607 TSC_hg19_v1_chr2_-_172750755 AK091071 BC016932 AJ496568 Y14494 AK022828 AK294638 NM_003705	295331	-	NM_001127383|CYBRD1|79901|cytochrome b reductase 1##NM_024843|CYBRD1|79901|cytochrome b reductase 1##AK128495|CYBRD1|79901|cytochrome b reductase 1##AK316588|CYBRD1|79901|cytochrome b reductase 1##AL136693|CYBRD1|79901|cytochrome b reductase 1##BC016900|CYBRD1|79901|cytochrome b reductase 1##AK291731|CYBRD1|79901|cytochrome b reductase 1##AK027115|CYBRD1|79901|cytochrome b reductase 1##AK225459|CYBRD1|79901|cytochrome b reductase 1##BC065290|CYBRD1|79901|cytochrome b reductase 1##HQ257890|CYBRD1|79901|cytochrome b reductase 1##AK301485|CYBRD1|79901|cytochrome b reductase 1##BX537412|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK055491|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##NM_001378|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK225759|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC091498|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AY037160|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK308008|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK298561|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK096579|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK075323|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF250307|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC109375|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF134477|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK316119|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC015038|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	0.765103	CTCF.p2:-12:0.765
chr5	57756684	57756816	reg1009002.p2	11.129	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	-814	-	BC137470 BC137473 BX648504 NM_001017992	-978156	-	NM_001127236 AL136844 AB463051 AM392551 AM393442	-1246822	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	30544	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	122169	+	BC036319 NM_001197223	539008	-	DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.977602	CTCF.p2:-2:0.978
chr15	63340295	63340410	reg1007440.p1	11.128	+	M19715 TSC_hg19_v1_chr15_+_63336282	-4074	+	L02923 TSC_hg19_v1_chr15_+_63335956	-4394	+	M19714 TSC_hg19_v1_chr15_+_63335095	-5262	+	TSC_hg19_v1_chr15_+_63340667 AB209041 NM_001018008 BC053545 BC050473 AK301319 AK298625 AB385207 CU690980 DQ424903 EU832801 GQ129381 L02922 AF474156	337	+	NM_032857 NM_171846 BC067288 TSC_hg19_v1_chr15_+_63414026 AK027808	73664	+	TSC_hg19_v1_chr15_+_63414037 AY358709 BC037198	73701	+	M19715|TPM1|7168|tropomyosin 1 (alpha)##L02923|TPM1|7168|tropomyosin 1 (alpha)##M19714|TPM1|7168|tropomyosin 1 (alpha)##AB209041|TPM1|7168|tropomyosin 1 (alpha)##NM_001018008|TPM1|7168|tropomyosin 1 (alpha)##BC053545|TPM1|7168|tropomyosin 1 (alpha)##BC050473|TPM1|7168|tropomyosin 1 (alpha)##AK301319|TPM1|7168|tropomyosin 1 (alpha)##AK298625|TPM1|7168|tropomyosin 1 (alpha)##DQ424903|TPM1|7168|tropomyosin 1 (alpha)##EU832801|TPM1|7168|tropomyosin 1 (alpha)##GQ129381|TPM1|7168|tropomyosin 1 (alpha)##L02922|TPM1|7168|tropomyosin 1 (alpha)##AF474156|TPM1|7168|tropomyosin 1 (alpha)##NM_032857|LACTB|114294|lactamase, beta##NM_171846|LACTB|114294|lactamase, beta##BC067288|LACTB|114294|lactamase, beta##AK027808|LACTB|114294|lactamase, beta##AY358709|LACTB|114294|lactamase, beta##BC037198|LACTB|114294|lactamase, beta	0.722447	CTCF.p2:-12:0.722
chr20	43672827	43672954	reg1009749.p1	11.128	+	AK315238 U60207 TSC_hg19_v1_chr20_+_43595176 BC058916 BC039023 U18297	-77699	+	NM_006282 TSC_hg19_v1_chr20_+_43595152 AB209315 BC029511 AK309169 AK225326 BC005231 BC015332 BC038850 CR933633 BC093768	-77744	+	AB590243 BT020008 BT020009 CR456765 CU677113 DQ891151 EU176561 TSC_hg19_v1_chr20_-_43589038 AK129538 U58970 BC014907 AK222952 BC001763 BC007423 AK000594 BC006573 AB085681 AK302128 AK307655 NM_006809	-83836	-	BC132957 BC132959 BC144234 TSC_hg19_v1_chr20_-_43729732 AK289735 NM_002251	56799	-	CU691668 AY038181 BC039173 AY358822 NM_145652	70877	-	AB464352 AY358678 AY037803 NM_080869	80206	-	AK315238|STK4|6789|serine/threonine kinase 4##U60207|STK4|6789|serine/threonine kinase 4##BC058916|STK4|6789|serine/threonine kinase 4##BC039023|STK4|6789|serine/threonine kinase 4##U18297|STK4|6789|serine/threonine kinase 4##NM_006282|STK4|6789|serine/threonine kinase 4##AB209315|STK4|6789|serine/threonine kinase 4##BC029511|STK4|6789|serine/threonine kinase 4##AK309169|STK4|6789|serine/threonine kinase 4##AK225326|STK4|6789|serine/threonine kinase 4##BC005231|STK4|6789|serine/threonine kinase 4##BC015332|STK4|6789|serine/threonine kinase 4##BC038850|STK4|6789|serine/threonine kinase 4##CR933633|STK4|6789|serine/threonine kinase 4##BC093768|STK4|6789|serine/threonine kinase 4##BT020008|TOMM34|10953|translocase of outer mitochondrial membrane 34##BT020009|TOMM34|10953|translocase of outer mitochondrial membrane 34##CR456765|TOMM34|10953|translocase of outer mitochondrial membrane 34##DQ891151|TOMM34|10953|translocase of outer mitochondrial membrane 34##EU176561|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK129538|TOMM34|10953|translocase of outer mitochondrial membrane 34##U58970|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC014907|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK222952|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC001763|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC007423|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK000594|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC006573|TOMM34|10953|translocase of outer mitochondrial membrane 34##AB085681|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK302128|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK307655|TOMM34|10953|translocase of outer mitochondrial membrane 34##NM_006809|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC132957|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC132959|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC144234|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##AK289735|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##NM_002251|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##AY038181|WFDC5|149708|WAP four-disulfide core domain 5##BC039173|WFDC5|149708|WAP four-disulfide core domain 5##AY358822|WFDC5|149708|WAP four-disulfide core domain 5##NM_145652|WFDC5|149708|WAP four-disulfide core domain 5##AY358678|WFDC12|128488|WAP four-disulfide core domain 12##AY037803|WFDC12|128488|WAP four-disulfide core domain 12##NM_080869|WFDC12|128488|WAP four-disulfide core domain 12	0.055511	
chr4	113859739	113859879	reg1010679.p1	11.128	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-120508	+	NM_015454 TSC_hg19_v1_chr4_+_113558677	-301141	+	TSC_hg19_v1_chr4_-_113558120 AK302613 AK299831 NM_018392	-301674	-	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	111025	+	TSC_hg19_v1_chr4_+_114214102 AK294720	354310	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	822472	-	AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7##AK302613|C4orf21|55345|chromosome 4 open reading frame 21##AK299831|C4orf21|55345|chromosome 4 open reading frame 21##NM_018392|C4orf21|55345|chromosome 4 open reading frame 21##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK294720|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.960964	CTCF.p2:12:0.961
chr6_apd_hap1	2881180	2881306	reg1011714.p1	11.128	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999083	CTCF.p2:8:0.999
chr11	111802628	111802753	reg1010323.p1	11.127	+	TSC_hg19_v1_chr11_+_111789658 AK057948	-13030	+	NM_080659 BC008501 TSC_hg19_v1_chr11_+_111789636	-13072	+	BC110872 TSC_hg19_v1_chr11_+_111783490 D89617 BC109393 AB587583 CR457408	-19176	+	TSC_hg19_v1_chr11_+_111807932 DQ642016 NM_001037954	5218	+	TSC_hg19_v1_chr11_+_111808066 BC035509 BC064479 BC128600	5393	+	TSC_hg19_v1_chr11_+_111848069 NM_033425 AK289807 BC033034 AB051522	45376	+	AK057948|C11orf52|91894|chromosome 11 open reading frame 52##NM_080659|C11orf52|91894|chromosome 11 open reading frame 52##BC008501|C11orf52|91894|chromosome 11 open reading frame 52##BC110872|HSPB2-C11orf52|100528019|HSPB2-C11orf52 readthrough (non-protein coding)##D89617|HSPB2|3316|heat shock 27kDa protein 2##BC109393|HSPB2|3316|heat shock 27kDa protein 2##CR457408|HSPB2|3316|heat shock 27kDa protein 2##DQ642016|DIXDC1|85458|DIX domain containing 1##NM_001037954|DIXDC1|85458|DIX domain containing 1##BC035509|DIXDC1|85458|DIX domain containing 1##BC064479|DIXDC1|85458|DIX domain containing 1##BC128600|DIXDC1|85458|DIX domain containing 1##NM_033425|DIXDC1|85458|DIX domain containing 1##AK289807|DIXDC1|85458|DIX domain containing 1##BC033034|DIXDC1|85458|DIX domain containing 1##AB051522|DIXDC1|85458|DIX domain containing 1	0.979607	CTCF.p2:8:0.980
chr3	155419791	155419937	reg1010919.p1	11.127	+	NM_001130960 NM_001130961 TSC_hg19_v1_chr3_-_155394133 AK096620	-25710	-	NM_007289 TSC_hg19_v1_chr3_+_154798107 BC101632 BC143465 BC101658	-621731	+	TSC_hg19_v1_chr3_+_154797924 NM_007288	-621933	+	BC113950 NM_014996	2132	-	BC042198 AF115515 TSC_hg19_v1_chr3_-_155524068 BC064898 AK055701 NM_173657 AL832165 AK289890	104197	-	D88152 TSC_hg19_v1_chr3_-_155572196 BC014416 AK312268 NM_001190992 NM_004733	152342	-	NM_001130960|PLCH1|23007|phospholipase C, eta 1##NM_001130961|PLCH1|23007|phospholipase C, eta 1##AK096620|PLCH1|23007|phospholipase C, eta 1##NM_007289|MME|4311|membrane metallo-endopeptidase##BC101632|MME|4311|membrane metallo-endopeptidase##BC143465|MME|4311|membrane metallo-endopeptidase##BC101658|MME|4311|membrane metallo-endopeptidase##NM_007288|MME|4311|membrane metallo-endopeptidase##BC113950|PLCH1|23007|phospholipase C, eta 1##NM_014996|PLCH1|23007|phospholipase C, eta 1##BC042198|C3orf33|285315|chromosome 3 open reading frame 33##AF115515|C3orf33|285315|chromosome 3 open reading frame 33##BC064898|C3orf33|285315|chromosome 3 open reading frame 33##AK055701|C3orf33|285315|chromosome 3 open reading frame 33##NM_173657|C3orf33|285315|chromosome 3 open reading frame 33##AL832165|C3orf33|285315|chromosome 3 open reading frame 33##AK289890|C3orf33|285315|chromosome 3 open reading frame 33##D88152|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##BC014416|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##AK312268|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##NM_001190992|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##NM_004733|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1	0.906459	CTCF.p2:16:0.906
chr14	67633210	67633304	reg1008196.p1	11.126	+	AJ272343 TSC_hg19_v1_chr14_+_66975224 AK294532 AK297447 BC030016 DQ892463 DQ895675 AB385462 AJ272033	-658032	+	TSC_hg19_v1_chr14_+_66974870 AK315569	-658388	+	TSC_hg19_v1_chr14_+_66974859 AK025169	-658404	+	NM_173526 AK093449 AX748134 AK302154 BC037380 BC050401	22886	+	BC095485 TSC_hg19_v1_chr14_+_67708117 NM_022474 AK291240 AK098373 BC053366 AL832326 BC129933 AL832578 BC037966 AK057160	74906	+	CU692980 TSC_hg19_v1_chr14_-_67826522 BC001411 AF104629 BC031002 AK315784 AK001155 AF145316 AF077614 AF100741 BC025373 NM_015994	193309	-	AJ272343|GPHN|10243|gephyrin##AK294532|GPHN|10243|gephyrin##AK297447|GPHN|10243|gephyrin##BC030016|GPHN|10243|gephyrin##DQ892463|GPHN|10243|gephyrin##DQ895675|GPHN|10243|gephyrin##AJ272033|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##NM_173526|FAM71D|161142|family with sequence similarity 71, member D##AK093449|FAM71D|161142|family with sequence similarity 71, member D##AK302154|FAM71D|161142|family with sequence similarity 71, member D##BC037380|FAM71D|161142|family with sequence similarity 71, member D##BC050401|FAM71D|161142|family with sequence similarity 71, member D##BC095485|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##NM_022474|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK291240|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK098373|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC053366|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832326|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC129933|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832578|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC037966|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	0.949696	CTCF.p2:3:0.950
chr20	5549823	5549950	reg1010686.p1	11.126	+	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-254850	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-442191	+	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	-442364	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	41701	-	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	181180	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	342240	+	AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)	0.996121	CTCF.p2:0:0.996
chr15	100296136	100296273	reg1009549.p1	11.125	+	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-22570	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-22600	-	TSC_hg19_v1_chr15_-_100273591 BC084545 AK124852	-22638	-	AB527357 AJ315735 NM_139057	585939	-	BC034500 BC034970 NM_178842	788693	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	846205	-	BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC084545|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK124852|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)	0.515064	CTCF.p2:9:0.515
chr22	23130773	23130909	reg1011068.p1	11.125	+	TSC_hg19_v1_chr22_+_23063107 M18645 X53070 BC073786 X57805 X57813 AF026926 L35916 L35917 L35918 L35920 U43769 X64165 X64166 X54442	-67710	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	-75959	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	-90323	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	4265	+	TSC_hg19_v1_chr22_+_23154240 L29158 L29159 L29160 L29161 L29164 BC032452 BC089414 AY190827 X57810 L26902	23434	+	X62125 TSC_hg19_v1_chr22_+_23165276 AK129603 BC071804 BC033102 CU689610 L03633 HM996064 HM996172 AF124174 AF194540 AF194541 AF194542 AF194543 AF194544 AF194545 AF194546 AF194547 AF194548 AF194549 AF194550 AF194551 AF194552 AF194553 AF194554 AF194555 AF194556 AF194557 AF194558 AF194559 AF194560 AF194561 AF194562 AF194563 AF194564 AF194565 AF194566 AF194567 AF194568 AF194569 AF194570 AF194571 AF194572 AF194573 AF194574 AF194575 AF194576 AF194577 AJ388658 AJ697911 AM181371 AM183998 AM184000 AM184018 AY685383 AY942038 DQ098709 DQ098711 DQ098766 DQ098772 DQ098775 DQ098778 DQ098782 DQ322816 DQ322984 DQ322992 EF589387 EF589498 EF589544 GU086862 L26532 Y09387 AM184068 DQ098712 DQ098779 AJ399866 AY050712 DQ322899 DQ322900 DQ322979 L21956 S67988 AY950800 U09888 U09892 Y08149 AF103683 AF044486 AY962389 AF092503 AJ408283 DQ098753 Z46858 DQ098738 DQ098739 DQ098762 L38428 DQ098710 AF103704 AF103701 AF103718 AF490954 AF490947 AF103709 AF103640 AF103644 AF103645 AF103647 AF103697 AF103698 AF103700 U87151	34554	+	L35918|IGLJ3|28831|immunoglobulin lambda joining 3##BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3##DQ896079|IGL@|3535|immunoglobulin lambda locus	0.999676	CTCF.p2:16:1.000
chr5	167150413	167150530	reg1008327.p1	11.125	+	HE578282 HE578283 NM_001122679	-438629	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-4217828	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-4220183	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	568350	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	763003	+	TSC_hg19_v1_chr5_+_167956546 AX721195	806146	+	NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.747003	CTCF.p2:-5:0.747
chr6	159463733	159463874	reg1010553.p1	11.125	+	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-42582	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	-42984	-	TSC_hg19_v1_chr6_-_159420766 BC035675	-43034	-	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	2298	-	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	126627	+	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	650447	-	BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC035675|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial	0.994045	CTCF.p2:-2:0.994
chr8	11447094	11447207	reg1006716.p2	11.125	+	S76617 NM_001715 BC018703 BC004473 BC038555	-95557	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-122921	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-242146	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	114570	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	180118	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	213034	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.999077	CTCF.p2:9:0.999
chr18	8478798	8478916	reg1009135.p1	11.124	+	TSC_hg19_v1_chr18_+_7946885 AK294492	-531951	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	-911540	+	NM_001105581	-1247721	+	TSC_hg19_v1_chr18_+_8609434 BC071600 BC098407 BC050338 NM_001025300	130579	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	130889	+	AK131528 NM_015210	238511	+	AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##BC071600|RAB12|201475|RAB12, member RAS oncogene family##BC098407|RAB12|201475|RAB12, member RAS oncogene family##BC050338|RAB12|201475|RAB12, member RAS oncogene family##NM_001025300|RAB12|201475|RAB12, member RAS oncogene family##AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165	0.960359	CTCF.p2:1:0.960
chr20	6809574	6809692	reg1009771.p1	11.124	+	BC069214 NM_001200	-60889	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-705470	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-705756	-	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	1111469	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	1190667	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	1190774	-	BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4	0.998281	CTCF.p2:7:0.998
chr8	131141943	131142067	reg1008319.p1	11.124	+	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-113122	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-113311	-	BC016345 TSC_hg19_v1_chr8_-_131028667	-113346	-	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	314026	-	NM_001115	910829	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1774352	+	AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B##NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.93729	CTCF.p2:-7:0.937
chrX	153616596	153616747	reg1010929.p1	11.124	+	BC000738 TSC_hg19_v1_chrX_+_153607746 X82434 AB463603 CU674378 AM393723 BT007401 CR536536	-8888	+	NM_000117 TSC_hg19_v1_chrX_+_153607623	-9058	+	TSC_hg19_v1_chrX_-_153603003 AK125630 GU727643 NM_001110556 NM_001456	-13670	-	NM_006013 TSC_hg19_v1_chrX_+_153626717 AK026568 AK130582 D28410 M64241 AK307511 BC026276 BX647954 AK027197 BC095425 AF218023 BC003358 BC071918 S35960 M73791 AF486812 BC063422 AB528224 AM393337 CR456797 CR542069 DQ369703 DQ369704 DQ369705 DQ369706 DQ369707 DQ369708 DQ369709 DQ369710 DQ369711 DQ369712 DQ369713 DQ369714 DQ369715 DQ369716	10044	+	AY927624 BC001561 U06846 NM_006730 BC028092	20887	-	TSC_hg19_v1_chrX_+_153639881 NM_000116 NM_181311 NM_181312 NM_181313 X92762 BC005062 AK291848 BC011515 AY231461 AY231462 AY231463 AY231464 AY258036 AY258037 AY258038 AY258039 AM392997 AM393205 DQ884408	23353	+	BC000738|EMD|2010|emerin##X82434|EMD|2010|emerin##AM393723|EMD|2010|emerin##BT007401|EMD|2010|emerin##CR536536|EMD|2010|emerin##NM_000117|EMD|2010|emerin##AK125630|FLNA|2316|filamin A, alpha##GU727643|FLNA|2316|filamin A, alpha##NM_001110556|FLNA|2316|filamin A, alpha##NM_001456|FLNA|2316|filamin A, alpha##NM_006013|RPL10|6134|ribosomal protein L10##AK026568|RPL10|6134|ribosomal protein L10##AK130582|RPL10|6134|ribosomal protein L10##D28410|RPL10|6134|ribosomal protein L10##M64241|RPL10|6134|ribosomal protein L10##AK307511|RPL10|6134|ribosomal protein L10##BC026276|RPL10|6134|ribosomal protein L10##BX647954|RPL10|6134|ribosomal protein L10##AK027197|RPL10|6134|ribosomal protein L10##BC095425|RPL10|6134|ribosomal protein L10##AF218023|RPL10|6134|ribosomal protein L10##BC003358|RPL10|6134|ribosomal protein L10##BC071918|RPL10|6134|ribosomal protein L10##S35960|RPL10|6134|ribosomal protein L10##M73791|RPL10|6134|ribosomal protein L10##AF486812|RPL10|6134|ribosomal protein L10##AM393337|RPL10|6134|ribosomal protein L10##CR456797|RPL10|6134|ribosomal protein L10##CR542069|RPL10|6134|ribosomal protein L10##DQ369703|RPL10|6134|ribosomal protein L10##DQ369704|RPL10|6134|ribosomal protein L10##DQ369705|RPL10|6134|ribosomal protein L10##DQ369706|RPL10|6134|ribosomal protein L10##DQ369707|RPL10|6134|ribosomal protein L10##DQ369708|RPL10|6134|ribosomal protein L10##DQ369709|RPL10|6134|ribosomal protein L10##DQ369710|RPL10|6134|ribosomal protein L10##DQ369711|RPL10|6134|ribosomal protein L10##DQ369712|RPL10|6134|ribosomal protein L10##DQ369713|RPL10|6134|ribosomal protein L10##DQ369714|RPL10|6134|ribosomal protein L10##DQ369715|RPL10|6134|ribosomal protein L10##DQ369716|RPL10|6134|ribosomal protein L10##BC001561|DNASE1L1|1774|deoxyribonuclease I-like 1##U06846|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_006730|DNASE1L1|1774|deoxyribonuclease I-like 1##BC028092|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_000116|TAZ|6901|tafazzin##NM_181311|TAZ|6901|tafazzin##NM_181312|TAZ|6901|tafazzin##NM_181313|TAZ|6901|tafazzin##X92762|TAZ|6901|tafazzin##BC005062|TAZ|6901|tafazzin##AK291848|TAZ|6901|tafazzin##BC011515|TAZ|6901|tafazzin##AY231461|TAZ|6901|tafazzin##AY231462|TAZ|6901|tafazzin##AY231463|TAZ|6901|tafazzin##AY231464|TAZ|6901|tafazzin##AY258036|TAZ|6901|tafazzin##AY258037|TAZ|6901|tafazzin##AY258038|TAZ|6901|tafazzin##AY258039|TAZ|6901|tafazzin##AM392997|TAZ|6901|tafazzin##AM393205|TAZ|6901|tafazzin##DQ884408|TAZ|6901|tafazzin	0.15483	
chr11	108288426	108288549	reg1010625.p1	11.123	+	TSC_hg19_v1_chr11_+_108093793 AB209133 U33841	-194690	+	NM_000051	-194929	+	D83243 BC050561 TSC_hg19_v1_chr11_-_108093366 BC040356 BC094769 AK290020 NM_002519	-195115	-	BC059411 BC029536 AK303096 NM_152587	49755	-	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	80708	-	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	175917	-	AB209133|ATM|472|ataxia telangiectasia mutated##U33841|ATM|472|ataxia telangiectasia mutated##NM_000051|ATM|472|ataxia telangiectasia mutated##D83243|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC050561|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC040356|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC094769|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AK290020|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##NM_002519|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC029536|C11orf65|160140|chromosome 11 open reading frame 65##AK303096|C11orf65|160140|chromosome 11 open reading frame 65##NM_152587|C11orf65|160140|chromosome 11 open reading frame 65##AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5	0.89146	CTCF.p2:9:0.891
chr11	64555159	64555267	reg1006996.p1	11.123	+	L49345 L49380 BC032676 BC020217 BC069273 TSC_hg19_v1_chr11_-_64546242 D26120 D26121 AK301803 BC034451 NM_004630 NM_201995 NM_201997 NM_201998	-8955	-	Y08766 TSC_hg19_v1_chr11_-_64546170	-9055	-	TSC_hg19_v1_chr11_-_64546015 BC008080 BC008724 AK296237 AK299705	-9208	-	CU690514 BC039839 AK298383 AK304495 BC047865 NM_004579	15453	-	TSC_hg19_v1_chr11_-_64578027 BC002544 AJ297485 AJ297486 NM_130800 NM_130801	22844	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	22981	-	L49345|SF1|7536|splicing factor 1##L49380|SF1|7536|splicing factor 1##BC032676|SF1|7536|splicing factor 1##BC020217|SF1|7536|splicing factor 1##BC069273|SF1|7536|splicing factor 1##D26120|SF1|7536|splicing factor 1##D26121|SF1|7536|splicing factor 1##AK301803|SF1|7536|splicing factor 1##BC034451|SF1|7536|splicing factor 1##NM_004630|SF1|7536|splicing factor 1##NM_201995|SF1|7536|splicing factor 1##NM_201997|SF1|7536|splicing factor 1##NM_201998|SF1|7536|splicing factor 1##Y08766|SF1|7536|splicing factor 1##BC008080|SF1|7536|splicing factor 1##BC008724|SF1|7536|splicing factor 1##AK296237|SF1|7536|splicing factor 1##AK299705|SF1|7536|splicing factor 1##BC039839|MAP4K2|5871|mitogen-activated protein kinase kinase kinase kinase 2##AK298383|MAP4K2|5871|mitogen-activated protein kinase kinase kinase kinase 2##AK304495|MAP4K2|5871|mitogen-activated protein kinase kinase kinase kinase 2##BC047865|MAP4K2|5871|mitogen-activated protein kinase kinase kinase kinase 2##NM_004579|MAP4K2|5871|mitogen-activated protein kinase kinase kinase kinase 2##BC002544|MEN1|4221|multiple endocrine neoplasia I##AJ297485|MEN1|4221|multiple endocrine neoplasia I##AJ297486|MEN1|4221|multiple endocrine neoplasia I##NM_130800|MEN1|4221|multiple endocrine neoplasia I##NM_130801|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I	0.93355	CTCF.p2:15:0.934
chr1	16767046	16767194	reg1006307.p1	11.123	+	AK128106 BC022039 AK311614 AY327405 NM_198546	-3218	-	NM_001114600 NM_015609 BC023988 TSC_hg19_v1_chr1_+_16693726 BX640985 AJ295987 AB097042 AB097043 AB097046 AK297926 AK298576 AK308787 AL050028 AK316205 BC065538 AB097044 AB097045 BC010631	-73449	+	TSC_hg19_v1_chr1_-_16678969 BC063864 NM_018994 AK055598 BC043410	-88172	-	NM_001145277 NM_001145278 NM_018090 TSC_hg19_v1_chr1_+_16767200	64	+	AK223344 TSC_hg19_v1_chr1_+_16767218 AK300764 AK302227 AK023545 BC018914	105	+	TSC_hg19_v1_chr1_+_16767236 BC017014 AK001282 AB463921 AK024468 AM393342	125	+	AK128106|SPATA21|374955|spermatogenesis associated 21##BC022039|SPATA21|374955|spermatogenesis associated 21##AK311614|SPATA21|374955|spermatogenesis associated 21##AY327405|SPATA21|374955|spermatogenesis associated 21##NM_198546|SPATA21|374955|spermatogenesis associated 21##NM_001114600|C1orf144|26099|chromosome 1 open reading frame 144##NM_015609|C1orf144|26099|chromosome 1 open reading frame 144##BC023988|C1orf144|26099|chromosome 1 open reading frame 144##BX640985|C1orf144|26099|chromosome 1 open reading frame 144##AJ295987|C1orf144|26099|chromosome 1 open reading frame 144##AB097042|C1orf144|26099|chromosome 1 open reading frame 144##AB097043|C1orf144|26099|chromosome 1 open reading frame 144##AB097046|C1orf144|26099|chromosome 1 open reading frame 144##AK297926|C1orf144|26099|chromosome 1 open reading frame 144##AK298576|C1orf144|26099|chromosome 1 open reading frame 144##AK308787|C1orf144|26099|chromosome 1 open reading frame 144##AL050028|C1orf144|26099|chromosome 1 open reading frame 144##AK316205|C1orf144|26099|chromosome 1 open reading frame 144##BC065538|C1orf144|26099|chromosome 1 open reading frame 144##AB097044|C1orf144|26099|chromosome 1 open reading frame 144##AB097045|C1orf144|26099|chromosome 1 open reading frame 144##BC010631|C1orf144|26099|chromosome 1 open reading frame 144##BC063864|FBXO42|54455|F-box protein 42##NM_018994|FBXO42|54455|F-box protein 42##AK055598|FBXO42|54455|F-box protein 42##BC043410|FBXO42|54455|F-box protein 42##NM_001145277|NECAP2|55707|NECAP endocytosis associated 2##NM_001145278|NECAP2|55707|NECAP endocytosis associated 2##NM_018090|NECAP2|55707|NECAP endocytosis associated 2##AK223344|NECAP2|55707|NECAP endocytosis associated 2##AK300764|NECAP2|55707|NECAP endocytosis associated 2##AK302227|NECAP2|55707|NECAP endocytosis associated 2##AK023545|NECAP2|55707|NECAP endocytosis associated 2##BC018914|NECAP2|55707|NECAP endocytosis associated 2##BC017014|NECAP2|55707|NECAP endocytosis associated 2##AK001282|NECAP2|55707|NECAP endocytosis associated 2##AK024468|NECAP2|55707|NECAP endocytosis associated 2##AM393342|NECAP2|55707|NECAP endocytosis associated 2	1.034884	CTCF.p2:-4:0.997
chr19	12074825	12074936	reg1008463.p1	11.123	+	TSC_hg19_v1_chr19_+_12035889 AK299182 AK308305 AL136732 NM_144566 BC144406 BC136777	-38962	+	TSC_hg19_v1_chr19_+_11998643 BC051309 NM_021915 EU446913	-76207	+	AL833935 NM_152262	-98037	+	AK092240 AK299224 AX747424 NM_001012753 BC105711 BC105712 BC105713	1002	+	TSC_hg19_v1_chr19_-_12146492 AK129553 BC047412	71609	-	TSC_hg19_v1_chr19_-_12146530 AK098300 NM_001080411	71661	-	AK299182|ZNF763|284390|zinc finger protein 763##AK308305|ZNF700|90592|zinc finger protein 700##AL136732|ZNF700|90592|zinc finger protein 700##NM_144566|ZNF700|90592|zinc finger protein 700##BC144406|ZNF700|90592|zinc finger protein 700##BC136777|ZNF700|90592|zinc finger protein 700##BC051309|ZNF69|7620|zinc finger protein 69##NM_021915|ZNF69|7620|zinc finger protein 69##EU446913|ZNF69|7620|zinc finger protein 69##AL833935|ZNF439|90594|zinc finger protein 439##NM_152262|ZNF439|90594|zinc finger protein 439##AK092240|ZNF763|284390|zinc finger protein 763##AK299224|ZNF763|284390|zinc finger protein 763##NM_001012753|ZNF763|284390|zinc finger protein 763##BC105711|ZNF763|284390|zinc finger protein 763##BC105712|ZNF763|284390|zinc finger protein 763##BC105713|ZNF763|284390|zinc finger protein 763##BC047412|ZNF433|163059|zinc finger protein 433##AK098300|ZNF433|163059|zinc finger protein 433##NM_001080411|ZNF433|163059|zinc finger protein 433	0.997605	CTCF.p2:-5:0.998
chr3	137411769	137411891	reg1009156.p1	11.122	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-735000	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-762493	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	-830738	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	71317	+	AK098474 NM_001002026 AF349452	305849	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	317173	+	AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18	0.831447	CTCF.p2:12:0.831
chr12	20373367	20373497	reg1008092.p1	11.121	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-780244	+	TSC_hg19_v1_chr12_+_19592783 AB209384	-780637	+	TSC_hg19_v1_chr12_+_19592425 AK131361 NM_001114176 NM_153207 AK126973 BC022220	-780913	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	148766	+	AK308317 NM_001244683	351365	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	475063	+	BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##AK131361|AEBP2|121536|AE binding protein 2##NM_001114176|AEBP2|121536|AE binding protein 2##NM_153207|AEBP2|121536|AE binding protein 2##AK126973|AEBP2|121536|AE binding protein 2##BC022220|AEBP2|121536|AE binding protein 2##BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	0.071289	
chr5	139752583	139752723	reg1010732.p1	11.121	+	AF332961 NM_031467 AF336237 BC136262 BC143602 AF313465 AB032762	-12847	+	M60278 BC033097 TSC_hg19_v1_chr5_-_139726189 AK222688 AK307310 AK313202 NM_001945	-26470	-	TSC_hg19_v1_chr5_-_139725861 EU832647 EU832724	-26765	-	TSC_hg19_v1_chr5_-_139780719 BC079833	28064	-	TSC_hg19_v1_chr5_-_139781027 BC030152	28388	-	TSC_hg19_v1_chr5_+_139781398 NM_001197030 NM_017747 NM_017978 NM_020690 NM_024668	28744	+	AF332961|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##NM_031467|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AF336237|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##BC136262|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##BC143602|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AF313465|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AB032762|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##M60278|HBEGF|1839|heparin-binding EGF-like growth factor##BC033097|HBEGF|1839|heparin-binding EGF-like growth factor##AK222688|HBEGF|1839|heparin-binding EGF-like growth factor##AK307310|HBEGF|1839|heparin-binding EGF-like growth factor##AK313202|HBEGF|1839|heparin-binding EGF-like growth factor##NM_001945|HBEGF|1839|heparin-binding EGF-like growth factor##EU832647|HBEGF|1839|heparin-binding EGF-like growth factor##EU832724|HBEGF|1839|heparin-binding EGF-like growth factor##NM_001197030|ANKHD1|54882|ankyrin repeat and KH domain containing 1##NM_017747|ANKHD1|54882|ankyrin repeat and KH domain containing 1##NM_017978|ANKHD1|54882|ankyrin repeat and KH domain containing 1##NM_020690|ANKHD1-EIF4EBP3|404734|ANKHD1-EIF4EBP3 readthrough##NM_024668|ANKHD1|54882|ankyrin repeat and KH domain containing 1	0.896983	CTCF.p2:-3:0.897
chr8	109299456	109299572	reg1008019.p1	11.121	+	TSC_hg19_v1_chr8_-_109260947 BC017887 AK313186 BC005944 BC016706 BC021679 U94175 U62962 BC008419 NM_001568 AK310902	-38529	-	AB527268 CR457029 CR542275 CU674376 CU677689 CU678957 DQ892278 DQ895478 BC000734 TSC_hg19_v1_chr8_-_109260938 U54562 U85947	-38580	-	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	-203640	-	TSC_hg19_v1_chr8_+_109455865 BC021667 NM_014673 AK222615 BC007027 BC020753	156338	+	TSC_hg19_v1_chr8_+_109455874 AK290974 D14659 AB384437 CR457402 CU676696 CU692380 HQ447150	156366	+	AK055230 NM_153015 BC033057 BC030710	500292	-	BC017887|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK313186|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC005944|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC016706|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC021679|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U94175|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U62962|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC008419|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##NM_001568|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK310902|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR457029|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR542275|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ892278|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ895478|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC000734|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U54562|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U85947|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2##BC021667|TTC35|9694|tetratricopeptide repeat domain 35##NM_014673|TTC35|9694|tetratricopeptide repeat domain 35##AK222615|TTC35|9694|tetratricopeptide repeat domain 35##BC007027|TTC35|9694|tetratricopeptide repeat domain 35##BC020753|TTC35|9694|tetratricopeptide repeat domain 35##AK290974|TTC35|9694|tetratricopeptide repeat domain 35##D14659|TTC35|9694|tetratricopeptide repeat domain 35##CR457402|TTC35|9694|tetratricopeptide repeat domain 35##HQ447150|TTC35|9694|tetratricopeptide repeat domain 35##AK055230|TMEM74|157753|transmembrane protein 74##NM_153015|TMEM74|157753|transmembrane protein 74##BC030710|TMEM74|157753|transmembrane protein 74	0.901045	CTCF.p2:0:0.901
chr8	65664628	65664772	reg1008321.p1	11.121	+	TSC_hg19_v1_chr8_+_65493611 AK091333	-171036	+	NM_152414 AK293979	-171842	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-1583500	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	46579	-	TSC_hg19_v1_chr8_-_66546394 AK001373	881695	-	TSC_hg19_v1_chr8_-_66546404 AK304463	881706	-	AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AK001373|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1	0.98351	CTCF.p2:-4:0.984
chrX	139816040	139816142	reg1007939.p2	11.121	+	TSC_hg19_v1_chrX_+_139791923 AK054978	-24164	+	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	-228839	-	BC137148 BC137149 NM_001013403	-768415	-	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	50561	-	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	268715	+	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	280720	+	AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1	0.901196	CTCF.p2:24:0.901
chr11	7709602	7709702	reg1007099.p1	11.120	+	AB209000 BC001346 AF169802 NM_016229	-14900	-	AK296718 TSC_hg19_v1_chr11_+_7618421	-91234	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	-174409	+	NM_198185	18288	-	AF173006 NM_153444 HQ258379 BC101710 BC113557	108851	-	AB463971 AF158377 NM_153445	137866	-	AB209000|CYB5R2|51700|cytochrome b5 reductase 2##BC001346|CYB5R2|51700|cytochrome b5 reductase 2##AF169802|CYB5R2|51700|cytochrome b5 reductase 2##NM_016229|CYB5R2|51700|cytochrome b5 reductase 2##AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##NM_198185|OVCH2|341277|ovochymase 2 (gene/pseudogene)##AF173006|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##NM_153444|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##HQ258379|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##BC101710|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##BC113557|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##AF158377|OR5P3|120066|olfactory receptor, family 5, subfamily P, member 3##NM_153445|OR5P3|120066|olfactory receptor, family 5, subfamily P, member 3	0.957631	CTCF.p2:14:0.958
chr4	164406097	164406232	reg1009066.p2	11.120	+	AB527371 AM393077 BC143053 BC143054 BC146698 CR533560 CU688544 BC142943 AL136779 AK057325 BC125101 AK314517 BC028707 NM_032136	-11199	-	BC042416 NM_006174	-141074	+	NM_000909	-152218	-	NM_018352 TSC_hg19_v1_chr4_+_164415764	9554	+	TSC_hg19_v1_chr4_+_164415817 BC017418 AK298235	9652	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	9678	+	AM393077|TKTL2|84076|transketolase-like 2##BC143053|TKTL2|84076|transketolase-like 2##BC143054|TKTL2|84076|transketolase-like 2##BC146698|TKTL2|84076|transketolase-like 2##CR533560|TKTL2|84076|transketolase-like 2##BC142943|TKTL2|84076|transketolase-like 2##AL136779|TKTL2|84076|transketolase-like 2##AK057325|TKTL2|84076|transketolase-like 2##BC125101|TKTL2|84076|transketolase-like 2##AK314517|TKTL2|84076|transketolase-like 2##BC028707|TKTL2|84076|transketolase-like 2##NM_032136|TKTL2|84076|transketolase-like 2##BC042416|NPY5R|4889|neuropeptide Y receptor Y5##NM_006174|NPY5R|4889|neuropeptide Y receptor Y5##NM_000909|NPY1R|4886|neuropeptide Y receptor Y1##NM_018352|C4orf43|55319|chromosome 4 open reading frame 43##BC017418|C4orf43|55319|chromosome 4 open reading frame 43##AK298235|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43	0.999891	CTCF.p2:-12:1.000
chr8	101576336	101576474	reg1009401.p1	11.120	+	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	-4465	-	TSC_hg19_v1_chr8_-_101322306 NM_183419	-254120	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-254224	-	AK093906 AX748361 NM_152628	85487	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	157401	-	AK095194 AK298990 TSC_hg19_v1_chr8_-_101734267	157816	-	BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK095194|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK298990|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.021434	
chr1	152413468	152413585	reg1008391.p1	11.118	+	AF077831 AK291301 AK298640 AK316568 BC030807 NM_016190	-26788	-	AY827490 NM_001014342	-81045	-	L01090 NM_002016	-115848	-	NM_178438	69793	+	AJ243662 NM_019060	73451	+	BC131716 NM_178435	125711	-	AF077831|CRNN|49860|cornulin##AK291301|CRNN|49860|cornulin##AK298640|CRNN|49860|cornulin##AK316568|CRNN|49860|cornulin##BC030807|CRNN|49860|cornulin##NM_016190|CRNN|49860|cornulin##AY827490|FLG2|388698|filaggrin family member 2##NM_001014342|FLG2|388698|filaggrin family member 2##L01090|FLG|2312|filaggrin##NM_002016|FLG|2312|filaggrin##NM_178438|LCE5A|254910|late cornified envelope 5A##AJ243662|CRCT1|54544|cysteine-rich C-terminal 1##NM_019060|CRCT1|54544|cysteine-rich C-terminal 1##BC131716|LCE3E|353145|late cornified envelope 3E##NM_178435|LCE3E|353145|late cornified envelope 3E	1.004973	CTCF.p2:5:0.994
chr13	25268341	25268484	reg1011102.p1	11.118	+	AK292968 NM_001185085 NM_001676	-13864	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	-181501	-	BC040438 NM_178540 AY358145	-384695	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	69907	+	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	228557	-	TSC_hg19_v1_chr13_-_25497054 NM_018451	228657	-	AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##NM_018451|CENPJ|55835|centromere protein J	0.99802	CTCF.p2:-4:0.998
chr20	62212246	62212373	reg1009504.p1	11.118	+	TSC_hg19_v1_chr20_-_62205593 AB232667 BC035130 AK023724 NM_001037335	-6721	-	AB051556 BC150283 NM_033405	-13203	-	BC000912 NM_024059	-27937	+	AB033095 TSC_hg19_v1_chr20_-_62258409 BC036305 NM_012384	46066	-	TSC_hg19_v1_chr20_-_62258426 AK298927	46128	-	DQ893121 DQ896397 BC047671 BC021084 BC032527 AF069709 BC056873 TSC_hg19_v1_chr20_-_62284781 AK074860 NM_015894 AK310010 BC009381 BC025234	72451	-	AB232667|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC035130|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##AK023724|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##NM_001037335|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##AB051556|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC150283|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##NM_033405|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC000912|C20orf195|79025|chromosome 20 open reading frame 195##NM_024059|C20orf195|79025|chromosome 20 open reading frame 195##AB033095|GMEB2|26205|glucocorticoid modulatory element binding protein 2##BC036305|GMEB2|26205|glucocorticoid modulatory element binding protein 2##NM_012384|GMEB2|26205|glucocorticoid modulatory element binding protein 2##AK298927|GMEB2|26205|glucocorticoid modulatory element binding protein 2##DQ893121|STMN3|50861|stathmin-like 3##DQ896397|STMN3|50861|stathmin-like 3##BC047671|STMN3|50861|stathmin-like 3##BC032527|STMN3|50861|stathmin-like 3##AF069709|STMN3|50861|stathmin-like 3##BC056873|STMN3|50861|stathmin-like 3##AK074860|STMN3|50861|stathmin-like 3##NM_015894|STMN3|50861|stathmin-like 3##AK310010|STMN3|50861|stathmin-like 3##BC009381|STMN3|50861|stathmin-like 3##BC025234|STMN3|50861|stathmin-like 3	0.292597	CTCF.p2:-3:0.221
chr3	13938209	13938319	reg1008938.p1	11.118	+	BC008811 NM_004625	-16647	-	AK304827 NM_001165035	-328025	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	-347601	+	TSC_hg19_v1_chr3_-_14166228 BC017082	227969	-	TSC_hg19_v1_chr3_-_14166250 BC033775	227986	-	TSC_hg19_v1_chr3_-_14166360 AK290764 AK056271	228062	-	BC008811|WNT7A|7476|wingless-type MMTV integration site family, member 7A##NM_004625|WNT7A|7476|wingless-type MMTV integration site family, member 7A##AK304827|FBLN2|2199|fibulin 2##NM_001165035|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2##BC017082|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##BC033775|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##AK290764|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##AK056271|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4	0.940071	CTCF.p2:-22:0.940
chr3	148579190	148579314	reg1009030.p1	11.118	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	-33654	+	NM_032049	-131286	+	NM_000685 NM_004835 NM_009585 NM_031850 TSC_hg19_v1_chr3_+_148415688 AK291541 BC068494 BC022447 M87290 S77410 X65699	-163565	+	NM_001870 AK313628 BC012613 DQ892805 DQ896052 CU680374 M27717	3816	+	TSC_hg19_v1_chr3_+_148709140 NM_001184720 NM_001184721 NM_004130	129915	+	TSC_hg19_v1_chr3_+_148709326 AK299962 BC000033 X79537 AK312283 AF087942 U44131	130083	+	NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_000685|AGTR1|185|angiotensin II receptor, type 1##NM_004835|AGTR1|185|angiotensin II receptor, type 1##NM_009585|AGTR1|185|angiotensin II receptor, type 1##NM_031850|AGTR1|185|angiotensin II receptor, type 1##AK291541|AGTR1|185|angiotensin II receptor, type 1##BC068494|AGTR1|185|angiotensin II receptor, type 1##BC022447|AGTR1|185|angiotensin II receptor, type 1##M87290|AGTR1|185|angiotensin II receptor, type 1##S77410|AGTR1|185|angiotensin II receptor, type 1##X65699|AGTR1|185|angiotensin II receptor, type 1##NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)##AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)##BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)##DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)##DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)##M27717|CPA3|1359|carboxypeptidase A3 (mast cell)##NM_001184720|GYG1|2992|glycogenin 1##NM_001184721|GYG1|2992|glycogenin 1##NM_004130|GYG1|2992|glycogenin 1##AK299962|GYG1|2992|glycogenin 1##BC000033|GYG1|2992|glycogenin 1##X79537|GYG1|2992|glycogenin 1##AK312283|GYG1|2992|glycogenin 1##AF087942|GYG1|2992|glycogenin 1##U44131|GYG1|2992|glycogenin 1	0.997008	CTCF.p2:-5:0.997
chr6	122702770	122702881	reg1009301.p1	11.118	+	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	-946000	+	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	-1047182	-	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-3031904	-	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	17870	+	TSC_hg19_v1_chr6_+_122720796 AK225593 AK225594 BC112323 M65217 AK294624 BC005329 BC064622 BC121050 BC121051 BC128420 AK316377 AB463722 CU675115 EU446897	17991	+	CU688532 CU689596 AL137261 TSC_hg19_v1_chr6_-_122792947 AF164794 AB033079 BC014412 BC028607 BC033029 NM_020755 AK075339 AY358429 AK128781 AF087902	90128	-	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2##AK225593|HSF2|3298|heat shock transcription factor 2##AK225594|HSF2|3298|heat shock transcription factor 2##BC112323|HSF2|3298|heat shock transcription factor 2##M65217|HSF2|3298|heat shock transcription factor 2##AK294624|HSF2|3298|heat shock transcription factor 2##BC005329|HSF2|3298|heat shock transcription factor 2##BC064622|HSF2|3298|heat shock transcription factor 2##BC121050|HSF2|3298|heat shock transcription factor 2##BC121051|HSF2|3298|heat shock transcription factor 2##BC128420|HSF2|3298|heat shock transcription factor 2##AK316377|HSF2|3298|heat shock transcription factor 2##EU446897|HSF2|3298|heat shock transcription factor 2##AL137261|SERINC1|57515|serine incorporator 1##AF164794|SERINC1|57515|serine incorporator 1##AB033079|SERINC1|57515|serine incorporator 1##BC014412|SERINC1|57515|serine incorporator 1##BC028607|SERINC1|57515|serine incorporator 1##BC033029|SERINC1|57515|serine incorporator 1##NM_020755|SERINC1|57515|serine incorporator 1##AK075339|SERINC1|57515|serine incorporator 1##AY358429|SERINC1|57515|serine incorporator 1##AF087902|SERINC1|57515|serine incorporator 1	0.940364	CTCF.p2:7:0.940
chr4	73885300	73885424	reg1011079.p1	11.117	+	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	-450871	-	AK290937 NM_001144756 NM_053036 AF236083	-980492	+	AF119815 NM_004885 AK308069 AJ311393	-987793	+	BC101684 BC143642 TSC_hg19_v1_chr4_-_73935431 AK096310 AY957564 AY957565 BC071812 NM_173827	50081	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	203417	-	TSC_hg19_v1_chr4_-_74124365 AB527094	238997	-	AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AK290937|NPFFR2|10886|neuropeptide FF receptor 2##NM_001144756|NPFFR2|10886|neuropeptide FF receptor 2##NM_053036|NPFFR2|10886|neuropeptide FF receptor 2##AF236083|NPFFR2|10886|neuropeptide FF receptor 2##AF119815|NPFFR2|10886|neuropeptide FF receptor 2##NM_004885|NPFFR2|10886|neuropeptide FF receptor 2##AK308069|NPFFR2|10886|neuropeptide FF receptor 2##AJ311393|NPFFR2|10886|neuropeptide FF receptor 2##BC101684|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC143642|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK096310|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957564|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957565|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC071812|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_173827|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17	0.998293	CTCF.p2:7:0.998
chr7	116853191	116853328	reg1010060.p1	11.117	+	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	-192894	+	TSC_hg19_v1_chr7_+_116660271 AK093212	-192992	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	-259686	+	BC078170 AK056742 NM_003391 X07876	110076	-	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	214286	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	266779	+	AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##AK093212|ST7|7982|suppression of tumorigenicity 7##AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	0.072468	
chr8	66948862	66948983	reg1009083.p1	11.117	+	NM_033105 BC016742 AF368276 AL133660	-15103	+	TSC_hg19_v1_chr8_-_66754300 AK292680	-194630	-	NM_001242318	-194954	-	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	90418	+	BC002599 BC011031 AK075431 NM_000756	141845	-	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	392384	+	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AK292680|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	0.998978	CTCF.p2:-8:0.999
chr1_gl000192_random	506261	506391	reg1010080.p1	11.116	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.943269	CTCF.p2:-14:0.943
chr5	10628100	10628229	reg1008605.p2	11.116	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-63722	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-186012	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-186161	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	133095	-	TSC_hg19_v1_chr5_-_10761341 BC002726	133178	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	133235	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.972296	CTCF.p2:27:0.972
chr9	34603770	34603895	reg1008925.p1	11.116	+	NM_001207011 TSC_hg19_v1_chr9_-_34590150	-13682	-	TSC_hg19_v1_chr9_-_34589723 BC001492 M73238 NM_001842 NM_147164	-14093	-	TSC_hg19_v1_chr9_-_34522975 BC022101 NM_198573	-80828	-	BC032136 NM_148178 NM_148179	8260	-	AB463589 CR541889 CU674154 DQ891980 EU176665 TSC_hg19_v1_chr9_-_34620472 BC000319 BC003004 AF082513	16639	-	TSC_hg19_v1_chr9_-_34620483 BC107697 AK314730	16653	-	NM_001207011|CNTFR|1271|ciliary neurotrophic factor receptor##BC001492|CNTFR|1271|ciliary neurotrophic factor receptor##M73238|CNTFR|1271|ciliary neurotrophic factor receptor##NM_001842|CNTFR|1271|ciliary neurotrophic factor receptor##NM_147164|CNTFR|1271|ciliary neurotrophic factor receptor##BC022101|ENHO|375704|energy homeostasis associated##NM_198573|ENHO|375704|energy homeostasis associated##BC032136|C9orf23|138716|chromosome 9 open reading frame 23##NM_148178|C9orf23|138716|chromosome 9 open reading frame 23##NM_148179|C9orf23|138716|chromosome 9 open reading frame 23##CR541889|DCTN3|11258|dynactin 3 (p22)##DQ891980|DCTN3|11258|dynactin 3 (p22)##EU176665|DCTN3|11258|dynactin 3 (p22)##BC000319|DCTN3|11258|dynactin 3 (p22)##BC003004|DCTN3|11258|dynactin 3 (p22)##AF082513|DCTN3|11258|dynactin 3 (p22)##BC107697|DCTN3|11258|dynactin 3 (p22)##AK314730|DCTN3|11258|dynactin 3 (p22)	0.999826	CTCF.p2:6:1.000
chr5	150677729	150677868	reg1011230.p1	11.115	+	NM_000405 NM_001167607 TSC_hg19_v1_chr5_+_150632745 AK225978 L01439 M76477 AK312494 X62078 AK298867 BC009273 X61095 CU679281 DQ891914 DQ895098 X16087	-45083	+	TSC_hg19_v1_chr5_-_150603654 AK292841 AK298063 AL713742 NM_015621	-74118	-	TSC_hg19_v1_chr5_-_150603648 AK225826	-74167	-	AK127978 NM_001145017 NM_181774	5531	-	BC101100 BC101101 BC101102 BC101103 AK297682 AY162214 AK122630 AK309575 NM_181776	49321	-	TSC_hg19_v1_chr5_+_150827163 NM_078483 BX537963 AY227111	149362	+	NM_000405|GM2A|2760|GM2 ganglioside activator##NM_001167607|GM2A|2760|GM2 ganglioside activator##L01439|GM2A|2760|GM2 ganglioside activator##M76477|GM2A|2760|GM2 ganglioside activator##AK312494|GM2A|2760|GM2 ganglioside activator##X62078|GM2A|2760|GM2 ganglioside activator##AK298867|GM2A|2760|GM2 ganglioside activator##BC009273|GM2A|2760|GM2 ganglioside activator##X61095|GM2A|2760|GM2 ganglioside activator##DQ891914|GM2A|2760|GM2 ganglioside activator##DQ895098|GM2A|2760|GM2 ganglioside activator##X16087|GM2A|2760|GM2 ganglioside activator##AK292841|CCDC69|26112|coiled-coil domain containing 69##AK298063|CCDC69|26112|coiled-coil domain containing 69##AL713742|CCDC69|26112|coiled-coil domain containing 69##NM_015621|CCDC69|26112|coiled-coil domain containing 69##AK225826|CCDC69|26112|coiled-coil domain containing 69##AK127978|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_001145017|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_181774|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##BC101100|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101101|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101102|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101103|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK297682|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AY162214|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK309575|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##NM_181776|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##NM_078483|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BX537963|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AY227111|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1	0.06256	
chr4	38037019	38037138	reg1010270.p1	11.114	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-58061	+	AF095288 BC069114 BC069400 NM_006607	-75023	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-144289	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	628748	+	AF289565 TSC_hg19_v1_chr4_-_38666549	629411	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	747521	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.94018	CTCF.p2:8:0.940
chr14	88958659	88958787	reg1009830.p1	11.113	+	AK055864 TSC_hg19_v1_chr14_+_88852071 AB463283 AM393238 CR533563	-106610	+	NM_001040428 NM_018418 TSC_hg19_v1_chr14_+_88852033 AF144487 AL136604 AK225746 AK290631 AK293007 CR936777	-106709	+	AF279890 NM_021161	-165471	-	TSC_hg19_v1_chr14_-_89016807 BC143846 BC143847	58116	-	TSC_hg19_v1_chr14_-_89017858 AK310480	59117	-	TSC_hg19_v1_chr14_-_89021360 NM_007039 X79510	62470	-	AK055864|SPATA7|55812|spermatogenesis associated 7##AM393238|SPATA7|55812|spermatogenesis associated 7##CR533563|SPATA7|55812|spermatogenesis associated 7##NM_001040428|SPATA7|55812|spermatogenesis associated 7##NM_018418|SPATA7|55812|spermatogenesis associated 7##AF144487|SPATA7|55812|spermatogenesis associated 7##AL136604|SPATA7|55812|spermatogenesis associated 7##AK225746|SPATA7|55812|spermatogenesis associated 7##AK290631|SPATA7|55812|spermatogenesis associated 7##AK293007|SPATA7|55812|spermatogenesis associated 7##CR936777|SPATA7|55812|spermatogenesis associated 7##AF279890|KCNK10|54207|potassium channel, subfamily K, member 10##NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10##BC143846|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21##BC143847|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21##AK310480|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21##NM_007039|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21##X79510|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21	0.983886	CTCF.p2:1:0.984
chr16	3577367	3577467	reg1007896.p1	11.113	+	AK023359 NM_024793	-17524	+	TSC_hg19_v1_chr16_+_3551003 AB089691 NM_015041 BC017070 AB014543 AB527560	-26426	+	NM_001080524	-31997	-	TSC_hg19_v1_chr16_-_3627397 AY601811 NM_178844 AK090431 AK090476	49982	-	TSC_hg19_v1_chr16_-_3661587 NM_032444 AK122775	84166	-	NM_005223	125522	+	AK023359|CLUAP1|23059|clusterin associated protein 1##NM_024793|CLUAP1|23059|clusterin associated protein 1##AB089691|CLUAP1|23059|clusterin associated protein 1##NM_015041|CLUAP1|23059|clusterin associated protein 1##BC017070|CLUAP1|23059|clusterin associated protein 1##AB014543|CLUAP1|23059|clusterin associated protein 1##NM_001080524|C16orf90|646174|chromosome 16 open reading frame 90##AY601811|NLRC3|197358|NLR family, CARD domain containing 3##NM_178844|NLRC3|197358|NLR family, CARD domain containing 3##AK090431|NLRC3|197358|NLR family, CARD domain containing 3##AK090476|NLRC3|197358|NLR family, CARD domain containing 3##NM_032444|SLX4|84464|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)##AK122775|SLX4|84464|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)##NM_005223|DNASE1|1773|deoxyribonuclease I	0.830068	CTCF.p2:-3:0.830
chr8	249331	249452	reg1008877.p1	11.113	+	NM_173539 AK093442 AX748129 TSC_hg19_v1_chr8_+_182396 AK313454 NM_001042415 NM_001042416 BC026190	-67049	+	AK127000 TSC_hg19_v1_chr8_-_182246 BC064938 BC052779	-67119	-	NM_001005504	-132368	-	AF419858 NM_012173 NM_183420 NM_183421 TSC_hg19_v1_chr8_+_356923	107474	+	TSC_hg19_v1_chr8_+_356957 BC050393	107593	+	TSC_hg19_v1_chr8_-_494835 AY194292 FJ381685 BC136248 BC136249	245524	-	NM_173539|ZNF596|169270|zinc finger protein 596##AK313454|ZNF596|169270|zinc finger protein 596##NM_001042415|ZNF596|169270|zinc finger protein 596##NM_001042416|ZNF596|169270|zinc finger protein 596##BC026190|ZNF596|169270|zinc finger protein 596##AK127000|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC064938|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC052779|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21##AF419858|FBXO25|26260|F-box protein 25##NM_012173|FBXO25|26260|F-box protein 25##NM_183420|FBXO25|26260|F-box protein 25##NM_183421|FBXO25|26260|F-box protein 25##BC050393|FBXO25|26260|F-box protein 25##AY194292|C8orf42|157695|chromosome 8 open reading frame 42##BC136248|C8orf42|157695|chromosome 8 open reading frame 42##BC136249|C8orf42|157695|chromosome 8 open reading frame 42	0.703268	CTCF.p2:0:0.614
chr13	32955842	32955977	reg1011145.p1	11.112	+	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	-66292	+	BC146956 BC146965 NM_001136571	-69820	-	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	-350468	+	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	46449	-	Z36834 TSC_hg19_v1_chr13_-_33112933 BC010643 U50532 AL049783 AK298546 AK312924 NM_014887 NM_033111	157016	-	TSC_hg19_v1_chr13_+_33160588 NM_015032	204654	+	NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1##Z36834|N4BP2L2|10443|NEDD4 binding protein 2-like 2##BC010643|N4BP2L2|10443|NEDD4 binding protein 2-like 2##U50532|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AL049783|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK298546|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK312924|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_014887|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_033111|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_015032|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.28141	CTCF.p2:-3:0.281
chr2	27145701	27145823	reg1009428.p1	11.111	+	AF264015 NM_020134 TSC_hg19_v1_chr2_+_27070999 BC002874 NM_001253723 NM_001253724	-74636	+	TSC_hg19_v1_chr2_+_27008924 U14518 BC000881 BC002703 CU674442 BT007246	-136774	+	NM_001809 NM_001042426 TSC_hg19_v1_chr2_+_27008894	-136870	+	TSC_hg19_v1_chr2_+_27193529 AK312342 AB025186 NM_012326 BC011557 Y11174	47788	+	TSC_hg19_v1_chr2_+_27255814 NM_001083590 NM_017727 BC068479	110021	+	TSC_hg19_v1_chr2_+_27255832 AK297150	110067	+	AF264015|DPYSL5|56896|dihydropyrimidinase-like 5##NM_020134|DPYSL5|56896|dihydropyrimidinase-like 5##BC002874|DPYSL5|56896|dihydropyrimidinase-like 5##NM_001253723|DPYSL5|56896|dihydropyrimidinase-like 5##NM_001253724|DPYSL5|56896|dihydropyrimidinase-like 5##U14518|CENPA|1058|centromere protein A##BC000881|CENPA|1058|centromere protein A##BC002703|CENPA|1058|centromere protein A##BT007246|CENPA|1058|centromere protein A##NM_001809|CENPA|1058|centromere protein A##NM_001042426|CENPA|1058|centromere protein A##AK312342|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##AB025186|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##NM_012326|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##BC011557|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##Y11174|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##NM_001083590|TMEM214|54867|transmembrane protein 214##NM_017727|TMEM214|54867|transmembrane protein 214##BC068479|TMEM214|54867|transmembrane protein 214##AK297150|TMEM214|54867|transmembrane protein 214	0.777931	CTCF.p2:4:0.744
chr7	128038741	128038848	reg1010497.p1	11.111	+	BC063892 NM_001114726 NM_001174164	-37097	-	TSC_hg19_v1_chr7_-_127983944 BC013889 AK222716 AK300500 AK295976 AK001239 NM_001166135 NM_018077	-54858	-	CU680694 TSC_hg19_v1_chr7_-_127983862	-54940	-	AK054640 AK293413 AK297943 TSC_hg19_v1_chr7_-_128046013 NM_001142573 NM_001142574 NM_001142575	7223	-	AK131294 TSC_hg19_v1_chr7_-_128049984 CR933672	11186	-	TSC_hg19_v1_chr7_-_128050037 AK092452 BC033622 AK054667 AK122994 NM_000883 NM_001102605 NM_001142576 NM_183243	11243	-	BC063892|PRRT4|401399|proline-rich transmembrane protein 4##NM_001114726|PRRT4|401399|proline-rich transmembrane protein 4##NM_001174164|PRRT4|401399|proline-rich transmembrane protein 4##BC013889|RBM28|55131|RNA binding motif protein 28##AK222716|RBM28|55131|RNA binding motif protein 28##AK300500|RBM28|55131|RNA binding motif protein 28##AK001239|RBM28|55131|RNA binding motif protein 28##NM_001166135|RBM28|55131|RNA binding motif protein 28##NM_018077|RBM28|55131|RNA binding motif protein 28##AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK131294|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##CR933672|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK092452|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC033622|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054667|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK122994|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_000883|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001102605|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142576|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_183243|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	0.862926	CTCF.p2:0:0.863
chr3	17193111	17193291	reg1006029.p1	11.110	+	BC036392 NM_015184	-218620	+	AB029015 NM_001144382	-266750	+	U65918 U66726 U66078 BC027595 NM_001351	-546235	-	AK310539 NM_001134381	548310	-	D86965 NM_014744	589197	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	590966	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.0	
chr7	2904758	2904923	reg1008206.p2	11.110	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-21032	-	AK289723 AB075830 BC146753 NM_133463	-185682	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-233137	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	178622	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	436159	+	TSC_hg19_v1_chr7_+_4721925 NM_001037165	1816998	+	AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##NM_001037165|FOXK1|221937|forkhead box K1	0.99136	CTCF.p2:-1:0.991
chr8	32964219	32964357	reg1008910.p2	11.110	+	TSC_hg19_v1_chr8_+_32785485 BC034319	-178799	+	NM_001159996 AK293270 AK293240	-384896	+	AK289927 NM_013959	-460038	+	TSC_hg19_v1_chr8_-_33330616 BC004884	366325	-	AK098505 AK297132 TSC_hg19_v1_chr8_-_33330636 AK303231 AJ512465 AJ535838 AJ535839 AK292993 AJ582015 NM_032664	366358	-	NM_032509 TSC_hg19_v1_chr8_+_33342703 AK314491 AK225476 AK027469 BC015965 AF251062 BC039740 BC028230 BC050528 CU690708	378416	+	NM_001159996|NRG1|3084|neuregulin 1##AK293270|NRG1|3084|neuregulin 1##AK293240|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1##BC004884|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK098505|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK297132|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK303231|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ512465|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535838|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535839|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK292993|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ582015|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032664|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032509|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK314491|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK225476|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK027469|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC015965|MAK16|84549|MAK16 homolog (S. cerevisiae)##AF251062|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC039740|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC028230|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC050528|MAK16|84549|MAK16 homolog (S. cerevisiae)	0.99392	CTCF.p2:29:0.994
chr12	9013185	9013311	reg1011391.p1	11.109	+	NM_144670 AK122624 AK290355 AL832139 BX648231	-38066	+	TSC_hg19_v1_chr12_+_8850570 AK302847 NM_020734 BC006368	-162644	+	AK124368 TSC_hg19_v1_chr12_-_8815486	-197766	-	TSC_hg19_v1_chr12_+_9067153 AB209063 AK293893 NM_004426 BC073964 U89277 BC157850	54021	+	TSC_hg19_v1_chr12_-_9102242 AK291143 M16985 AK222792 BC024206 AK312689	88970	-	TSC_hg19_v1_chr12_-_9102262 NM_001207024 NM_002355	89061	-	NM_144670|A2ML1|144568|alpha-2-macroglobulin-like 1##AK122624|A2ML1|144568|alpha-2-macroglobulin-like 1##AK290355|A2ML1|144568|alpha-2-macroglobulin-like 1##AL832139|A2ML1|144568|alpha-2-macroglobulin-like 1##BX648231|A2ML1|144568|alpha-2-macroglobulin-like 1##AK302847|RIMKLB|57494|ribosomal modification protein rimK-like family member B##NM_020734|RIMKLB|57494|ribosomal modification protein rimK-like family member B##BC006368|RIMKLB|57494|ribosomal modification protein rimK-like family member B##AK124368|MFAP5|8076|microfibrillar associated protein 5##AB209063|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##AK293893|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##NM_004426|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC073964|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##U89277|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC157850|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##AK291143|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##M16985|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK222792|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##BC024206|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK312689|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##NM_001207024|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##NM_002355|M6PR|4074|mannose-6-phosphate receptor (cation dependent)	0.835578	CTCF.p2:3:0.836
chr14	31825303	31825406	reg1007218.p1	11.109	+	TSC_hg19_v1_chr14_-_31676920 BC016947	-148419	-	TSC_hg19_v1_chr14_-_31676690 NM_015382	-148669	-	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	-329784	-	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	64407	-	TSC_hg19_v1_chr14_-_31926633 BC010618 AK302829 AK055367 NM_080664	101321	-	GQ981321 GQ981322 NM_001197184	131796	-	NM_015382|HECTD1|25831|HECT domain containing 1##BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3##BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A##BC010618|C14orf126|112487|chromosome 14 open reading frame 126##AK055367|C14orf126|112487|chromosome 14 open reading frame 126##NM_080664|C14orf126|112487|chromosome 14 open reading frame 126##GQ981321|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##GQ981322|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##NM_001197184|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)	0.462684	CTCF.p2:23:0.463
chr1	202433434	202433588	reg1011451.p1	11.108	+	AB050641 AB050642 NM_032103 NM_032104	-1641	+	TSC_hg19_v1_chr1_+_202317826 AK307591 NM_001167857 NM_001167858 NM_002481 AB003062 AF324888 BC144699 BC110907 BC034430 BC071166	-115638	+	TSC_hg19_v1_chr1_-_202311082 AF161499 NM_014176	-122425	-	AB588820 NM_001197131 TSC_hg19_v1_chr1_+_202509319	75769	+	AK094430 NM_001136504	179069	-	BC100814 BC100815 BC100816 BC100817 AK090672 NM_177402 TSC_hg19_v1_chr1_-_202679575	245988	-	AB050641|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050642|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032103|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032104|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AK307591|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167857|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167858|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_002481|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB003062|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AF324888|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC144699|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC110907|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC034430|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC071166|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AF161499|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##NM_014176|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AB588820|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001197131|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AK094430|SYT2|127833|synaptotagmin II##NM_001136504|SYT2|127833|synaptotagmin II##BC100814|SYT2|127833|synaptotagmin II##BC100815|SYT2|127833|synaptotagmin II##BC100816|SYT2|127833|synaptotagmin II##BC100817|SYT2|127833|synaptotagmin II##AK090672|SYT2|127833|synaptotagmin II##NM_177402|SYT2|127833|synaptotagmin II	0.777273	CTCF.p2:-15:0.777
chr12	22236261	22236380	reg1008996.p1	11.108	+	AF271388 TSC_hg19_v1_chr12_+_22199226 AF397212	-37091	+	TSC_hg19_v1_chr12_+_22199207 BC016609 NM_018686 AL832975 AK022927 AK222981	-37148	+	AK056519 TSC_hg19_v1_chr12_-_22094251 BC033804	-142070	-	BC117285 BC126162 BC031081 BC046158 AK315340 EU041716 NM_003034 X77922 TSC_hg19_v1_chr12_-_22487789	251360	-	AB385344 AB011100 BC042498 TSC_hg19_v1_chr12_-_22697128 AK299353	460819	-	BC117143 BC143859 BC143860 BC143878 TSC_hg19_v1_chr12_-_22697430 AK295862	461069	-	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##BC016609|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##NM_018686|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AL832975|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK022927|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK222981|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK056519|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##BC033804|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##BC117285|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC126162|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC031081|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC046158|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AK315340|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##EU041716|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##NM_003034|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##X77922|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AB011100|KIAA0528|9847|KIAA0528##BC042498|KIAA0528|9847|KIAA0528##AK299353|KIAA0528|9847|KIAA0528##BC117143|KIAA0528|9847|KIAA0528##BC143859|KIAA0528|9847|KIAA0528##BC143860|KIAA0528|9847|KIAA0528##BC143878|KIAA0528|9847|KIAA0528##AK295862|KIAA0528|9847|KIAA0528	0.229652	CTCF.p2:-16:0.230
chr2	44314453	44314604	reg1010015.p1	11.108	+	TSC_hg19_v1_chr2_-_44223145 BC130285 AY289212 NM_133259	-91389	-	BC026034 TSC_hg19_v1_chr2_-_44223116	-91410	-	AK299869 TSC_hg19_v1_chr2_-_44223114 AK125781 AK290016 AK308348	-91415	-	TSC_hg19_v1_chr2_+_44396013 NM_001033556 NM_001033557 NM_002706 NM_177968 NM_177969 AK056009 AK291214 DQ023508 DQ023509 DQ023510 DQ023511 BC064381 AJ271832 AJ271835 BC012002	81487	+	TSC_hg19_v1_chr2_+_44396066 AL833035	81582	+	NM_000341 BC022386 AK309145 AK313157 AB033549 AK091932 AK289636 L11696 M95548 AK223146 BC093624 BC093626 D82326 CU692594 DQ892031 DQ895222 DQ023513 DQ023515 DQ023516 DQ023517	188107	+	BC130285|LRPPRC|10128|leucine-rich PPR-motif containing##AY289212|LRPPRC|10128|leucine-rich PPR-motif containing##NM_133259|LRPPRC|10128|leucine-rich PPR-motif containing##BC026034|LRPPRC|10128|leucine-rich PPR-motif containing##AK299869|LRPPRC|10128|leucine-rich PPR-motif containing##AK125781|LRPPRC|10128|leucine-rich PPR-motif containing##AK290016|LRPPRC|10128|leucine-rich PPR-motif containing##AK308348|LRPPRC|10128|leucine-rich PPR-motif containing##NM_001033556|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_001033557|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_002706|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177968|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177969|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK056009|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK291214|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023508|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023509|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023510|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023511|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC064381|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271832|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271835|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC012002|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AL833035|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	0.910714	CTCF.p2:-25:0.911
chr3	47365890	47365995	reg1008863.p2	11.108	+	NM_025010 TSC_hg19_v1_chr3_+_47324433 AK023765 AK291477 AK295292 BX537953 BC015962 AB527175 AM393269 AM393767 BC032620	-41514	+	BC015311 NM_001134878 NM_022342 NM_182902	-41647	-	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	-160503	-	AB040904 NM_015466 TSC_hg19_v1_chr3_+_47422510 AK055157 AK299906 AK295888 AK289502 AB025194 AF290614 AK295877 BC089042	56590	+	TSC_hg19_v1_chr3_-_47517349 AK300311	151395	-	TSC_hg19_v1_chr3_-_47517417 AK291484 D83782 NM_012235	151490	-	NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)##AK023765|KLHL18|23276|kelch-like 18 (Drosophila)##AK291477|KLHL18|23276|kelch-like 18 (Drosophila)##AK295292|KLHL18|23276|kelch-like 18 (Drosophila)##BX537953|KLHL18|23276|kelch-like 18 (Drosophila)##BC015962|KLHL18|23276|kelch-like 18 (Drosophila)##AM393269|KLHL18|23276|kelch-like 18 (Drosophila)##AM393767|KLHL18|23276|kelch-like 18 (Drosophila)##BC032620|KLHL18|23276|kelch-like 18 (Drosophila)##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9##AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2##AB040904|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_015466|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK055157|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK299906|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295888|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK289502|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AB025194|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AF290614|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295877|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##BC089042|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK300311|SCAP|22937|SREBF chaperone##AK291484|SCAP|22937|SREBF chaperone##D83782|SCAP|22937|SREBF chaperone##NM_012235|SCAP|22937|SREBF chaperone	0.031389	
chr6	159081384	159081516	reg1008552.p1	11.108	+	TSC_hg19_v1_chr6_+_159071070 NM_001009991 NM_001242384 NM_001242394 NM_001242395 AK092729 AK298712 AX747692 BC085612	-10396	+	AB590427 CR456931 DQ892606 DQ892607 DQ895846 DQ895847 EU862237 U56255 TSC_hg19_v1_chr6_-_159065772 D50663 BC105588 BC029412 AK315601 NM_006519	-15676	-	BC033450 TSC_hg19_v1_chr6_+_158957752	-123748	+	J05021 X51521 TSC_hg19_v1_chr6_-_159239246	157772	-	TSC_hg19_v1_chr6_-_159239264 BC013903 AK299456 BC068458	157809	-	TSC_hg19_v1_chr6_-_159239276 NM_003379	157855	-	NM_001009991|SYTL3|94120|synaptotagmin-like 3##NM_001242384|SYTL3|94120|synaptotagmin-like 3##NM_001242394|SYTL3|94120|synaptotagmin-like 3##NM_001242395|SYTL3|94120|synaptotagmin-like 3##AK092729|SYTL3|94120|synaptotagmin-like 3##AK298712|SYTL3|94120|synaptotagmin-like 3##BC085612|SYTL3|94120|synaptotagmin-like 3##CR456931|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892606|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892607|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895846|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895847|DYNLT1|6993|dynein, light chain, Tctex-type 1##EU862237|DYNLT1|6993|dynein, light chain, Tctex-type 1##U56255|DYNLT1|6993|dynein, light chain, Tctex-type 1##D50663|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC105588|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC029412|DYNLT1|6993|dynein, light chain, Tctex-type 1##AK315601|DYNLT1|6993|dynein, light chain, Tctex-type 1##NM_006519|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC033450|TMEM181|57583|transmembrane protein 181##J05021|EZR|7430|ezrin##X51521|EZR|7430|ezrin##BC013903|EZR|7430|ezrin##AK299456|EZR|7430|ezrin##BC068458|EZR|7430|ezrin##NM_003379|EZR|7430|ezrin	0.022456	
chr2	114457862	114457991	reg1008963.p2	11.107	+	TSC_hg19_v1_chr2_+_114384849 AK289496 AF095350 AF095351 BC126129 BC144050 BC144052	-73020	+	TSC_hg19_v1_chr2_+_114384811 BC111008 NM_007082 NM_013412	-73112	+	TSC_hg19_v1_chr2_-_114384648 BC000596 BC105600	-73278	-	AF529364 CU676258 TSC_hg19_v1_chr2_-_114514079 AY358620	56152	-	AK025657 AK315719 TSC_hg19_v1_chr2_-_114514220 BC050096 BC018537 NM_025181	56371	-	TSC_hg19_v1_chr2_+_114647549 BC044590 NM_005721 AF127773	189621	+	AK289496|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095350|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095351|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC126129|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144050|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144052|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC111008|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##NM_007082|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##NM_013412|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC000596|RPL23AP7|118433|ribosomal protein L23a pseudogene 7##BC105600|RPL23AP7|118433|ribosomal protein L23a pseudogene 7##AF529364|SLC35F5|80255|solute carrier family 35, member F5##AY358620|SLC35F5|80255|solute carrier family 35, member F5##AK025657|SLC35F5|80255|solute carrier family 35, member F5##AK315719|SLC35F5|80255|solute carrier family 35, member F5##BC050096|SLC35F5|80255|solute carrier family 35, member F5##BC018537|SLC35F5|80255|solute carrier family 35, member F5##NM_025181|SLC35F5|80255|solute carrier family 35, member F5##BC044590|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##NM_005721|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AF127773|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	0.995894	CTCF.p2:12:0.996
chrX	47244037	47244160	reg1009149.p1	11.107	+	U28687 NM_003446 BC075003 AB528013 EU446919	-14075	+	TSC_hg19_v1_chrX_+_47092422 AK055588 AK098394 BC073960 BC063668 AB073597 BC000350 AB385092 U44839 AK294635	-151633	+	BC140849 NM_004651 TSC_hg19_v1_chrX_+_47092361	-151786	+	BC015023 NM_007130 NM_153380	98246	-	NM_001654 X04790 TSC_hg19_v1_chrX_+_47420605 AB208831 AK300975 AK130043 AK297453 AK307747 BC002466 BC007514	176469	+	TSC_hg19_v1_chrX_+_47441773 NM_003254 AK074854 AK296116 BC000866 BC007097	197625	+	U28687|ZNF157|7712|zinc finger protein 157##NM_003446|ZNF157|7712|zinc finger protein 157##BC075003|ZNF157|7712|zinc finger protein 157##EU446919|ZNF157|7712|zinc finger protein 157##AK055588|USP11|8237|ubiquitin specific peptidase 11##AK098394|USP11|8237|ubiquitin specific peptidase 11##BC073960|USP11|8237|ubiquitin specific peptidase 11##BC063668|USP11|8237|ubiquitin specific peptidase 11##AB073597|USP11|8237|ubiquitin specific peptidase 11##BC000350|USP11|8237|ubiquitin specific peptidase 11##U44839|USP11|8237|ubiquitin specific peptidase 11##AK294635|USP11|8237|ubiquitin specific peptidase 11##BC140849|USP11|8237|ubiquitin specific peptidase 11##NM_004651|USP11|8237|ubiquitin specific peptidase 11##BC015023|ZNF41|7592|zinc finger protein 41##NM_007130|ZNF41|7592|zinc finger protein 41##NM_153380|ZNF41|7592|zinc finger protein 41##NM_001654|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##X04790|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AB208831|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK300975|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK130043|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK297453|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK307747|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC002466|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC007514|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##NM_003254|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK074854|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK296116|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC000866|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC007097|TIMP1|7076|TIMP metallopeptidase inhibitor 1	0.960424	CTCF.p2:12:0.960
chr14	36353015	36353130	reg1009472.p1	11.105	+	TSC_hg19_v1_chr14_+_36295599 NM_032352 AY827074 BC006250 AK297106 AK310359 AK315424	-57469	+	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	-74677	-	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	-74925	-	AB463855 CU677729 BX248287 TSC_hg19_v1_chr14_-_36789806 AF208857 BC016821 AK293473 BC005197 AB038523 AK315290 NM_001144891 NM_016586	436772	-	TSC_hg19_v1_chr14_-_36982983 BC042093 NM_001101341	629910	-	NM_003317 U33749	635830	-	NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BX248287|MBIP|51562|MAP3K12 binding inhibitory protein 1##AF208857|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC016821|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK293473|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC005197|MBIP|51562|MAP3K12 binding inhibitory protein 1##AB038523|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK315290|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_001144891|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_016586|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC042093|SFTA3|253970|surfactant associated 3##NM_001101341|SFTA3|253970|surfactant associated 3##NM_003317|NKX2-1|7080|NK2 homeobox 1##U33749|NKX2-1|7080|NK2 homeobox 1	0.997207	CTCF.p2:-3:0.997
chr1	65525725	65525893	reg1009163.p2	11.104	+	TSC_hg19_v1_chr1_-_65432203 BC111401	-93581	-	TSC_hg19_v1_chr1_-_65432181 BC062431 BC009079 NM_002227	-93795	-	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	-315010	+	TSC_hg19_v1_chr1_+_65613263 NM_203464 BC146653 BC016180 AK309057 BC066944 NM_001005353	87552	+	TSC_hg19_v1_chr1_+_65613835 NM_013410 AK025926 AK313611 X60673	88039	+	TSC_hg19_v1_chr1_+_65613971 BC040224 BC136886 BC136887 BC148270 CR456830 CU688216 DQ892294 DQ895494	88221	+	BC111401|JAK1|3716|Janus kinase 1##BC062431|JAK1|3716|Janus kinase 1##BC009079|JAK1|3716|Janus kinase 1##NM_002227|JAK1|3716|Janus kinase 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_203464|AK4|205|adenylate kinase 4##BC146653|AK4|205|adenylate kinase 4##BC016180|AK4|205|adenylate kinase 4##AK309057|AK4|205|adenylate kinase 4##BC066944|AK4|205|adenylate kinase 4##NM_001005353|AK4|205|adenylate kinase 4##NM_013410|AK4|205|adenylate kinase 4##AK025926|AK4|205|adenylate kinase 4##AK313611|AK4|205|adenylate kinase 4##X60673|AK4|205|adenylate kinase 4##BC040224|AK4|205|adenylate kinase 4##BC136886|AK4|205|adenylate kinase 4##BC136887|AK4|205|adenylate kinase 4##BC148270|AK4|205|adenylate kinase 4##CR456830|AK4|205|adenylate kinase 4##DQ892294|AK4|205|adenylate kinase 4##DQ895494|AK4|205|adenylate kinase 4	0.189893	
chr19	14328300	14328415	reg1008091.p2	11.104	+	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	-11309	-	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	-67557	-	TSC_hg19_v1_chr19_+_14247979 BX537706	-80366	+	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	163692	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	163898	+	TSC_hg19_v1_chr19_-_14529877 AK301847	201532	-	AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule##AK301847|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A	0.106388	
chr19	47141934	47142055	reg1008245.p2	11.103	+	AF493875 NM_033258 BC095514	-4055	-	BC017857 L29016 D29634 BC110342 BC075814 D25418 TSC_hg19_v1_chr19_-_47128333 AK315278 NM_000960	-13671	-	AK310762 AK295927 TSC_hg19_v1_chr19_+_47105407	-36627	+	TSC_hg19_v1_chr19_-_47164311 BC034052 NM_145056	22376	-	BC015472 TSC_hg19_v1_chr19_-_47197232	55205	-	NM_001079882	75582	-	AF493875|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##NM_033258|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##BC095514|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##L29016|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##D29634|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC110342|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC075814|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##D25418|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##AK315278|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##NM_000960|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##AK310762|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##AK295927|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)##NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)##BC015472|PRKD2|25865|protein kinase D2##NM_001079882|PRKD2|25865|protein kinase D2	0.752244	CTCF.p2:-11:0.752
chr11	16810039	16810170	reg1011664.p1	11.102	+	TSC_hg19_v1_chr11_+_16760204 BC103747 AK315382 BC007103 BC016352 BC020937 U51678 CR456882 CU675547 AK124165	-49820	+	NM_014267 TSC_hg19_v1_chr11_+_16760165	-49944	+	AF309034 NM_033326	-312179	-	TSC_hg19_v1_chr11_-_16996590 D28414	186472	-	AB385210 TSC_hg19_v1_chr11_-_17035962 BC071599 NM_175058	225861	-	X79239 AB528349 CU688732 TSC_hg19_v1_chr11_-_17099216 DQ891107 DQ894288 BC000475 BC029732 BC100032 BC006772 AK312060 BC066322 D28429 L01124 NM_001017	289135	-	BC103747|C11orf58|10944|chromosome 11 open reading frame 58##AK315382|C11orf58|10944|chromosome 11 open reading frame 58##BC007103|C11orf58|10944|chromosome 11 open reading frame 58##BC016352|C11orf58|10944|chromosome 11 open reading frame 58##BC020937|C11orf58|10944|chromosome 11 open reading frame 58##U51678|C11orf58|10944|chromosome 11 open reading frame 58##CR456882|C11orf58|10944|chromosome 11 open reading frame 58##NM_014267|C11orf58|10944|chromosome 11 open reading frame 58##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6##D28414|RPL36A|6173|ribosomal protein L36a##BC071599|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##NM_175058|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##X79239|RPS13|6207|ribosomal protein S13##DQ891107|RPS13|6207|ribosomal protein S13##DQ894288|RPS13|6207|ribosomal protein S13##BC000475|RPS13|6207|ribosomal protein S13##BC029732|RPS13|6207|ribosomal protein S13##BC100032|RPS13|6207|ribosomal protein S13##BC006772|RPS13|6207|ribosomal protein S13##AK312060|RPS13|6207|ribosomal protein S13##BC066322|RPS13|6207|ribosomal protein S13##L01124|RPS13|6207|ribosomal protein S13##NM_001017|RPS13|6207|ribosomal protein S13	0.999658	CTCF.p2:6:1.000
chr1	14052452	14052595	reg1011248.p1	11.102	+	NM_012231 NM_015866 U17838	-21174	+	TSC_hg19_v1_chr1_+_14026688 BC014468 NM_001135610	-25799	+	NM_001006624 NM_001006625	-140557	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	23362	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	23400	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	23418	+	NM_012231|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_015866|PRDM2|7799|PR domain containing 2, with ZNF domain##U17838|PRDM2|7799|PR domain containing 2, with ZNF domain##BC014468|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001135610|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001006624|PDPN|10630|podoplanin##NM_001006625|PDPN|10630|podoplanin##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain	0.997385	CTCF.p2:3:0.997
chr3	50283742	50283858	reg1010148.p1	11.102	+	TSC_hg19_v1_chr3_+_50273754 AB463704 AF493906 AY677118 CR456783 CU677075 DQ892783 DQ895908 AK304473	-10016	+	TSC_hg19_v1_chr3_+_50273678 J03004	-10115	+	TSC_hg19_v1_chr3_+_50273657 BC014627 X04828	-10140	+	NM_001166425 AK302330	540	+	TSC_hg19_v1_chr3_+_50297644 BC033528 AK125074	13936	+	AK308875 NM_001005914 NM_004636 TSC_hg19_v1_chr3_+_50305047	21219	+	AF493906|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AY677118|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##CR456783|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##DQ892783|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##DQ895908|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AK304473|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##J03004|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##BC014627|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##X04828|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##NM_001166425|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AK302330|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AK308875|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##NM_001005914|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##NM_004636|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B	0.999377	CTCF.p2:0:0.999
chr5	1738080	1738198	reg1010214.p1	11.102	+	TSC_hg19_v1_chr5_-_1634100 BC019918 BC045555 AK311210 AK311251	-104021	-	TSC_hg19_v1_chr5_-_1634097 BC020552 BC053586 BC044220 AK308990 AK315872 BC067863 BC014604 AK307076	-104070	-	TSC_hg19_v1_chr5_-_1594617 BC150558	-143508	-	TSC_hg19_v1_chr5_-_1799926 AB049654 AF151109 AF155653 BC020642	61784	-	TSC_hg19_v1_chr5_-_1799952 AK312001 BC104652 EF036487 NM_032479	61833	-	TSC_hg19_v1_chr5_+_1801520 NM_004553 AK022503 BC038664 AF044959 BC046155 CR456880 HQ257915	63373	+	BC019918|LOC728613|728613|programmed cell death 6 pseudogene##BC045555|LOC728613|728613|programmed cell death 6 pseudogene##AK311210|LOC728613|728613|programmed cell death 6 pseudogene##BC020552|LOC728613|728613|programmed cell death 6 pseudogene##BC053586|LOC728613|728613|programmed cell death 6 pseudogene##BC044220|LOC728613|728613|programmed cell death 6 pseudogene##AK308990|LOC728613|728613|programmed cell death 6 pseudogene##BC067863|LOC728613|728613|programmed cell death 6 pseudogene##BC014604|LOC728613|728613|programmed cell death 6 pseudogene##AK307076|LOC728613|728613|programmed cell death 6 pseudogene##BC150558|SDHAP3|728609|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3##AB049654|MRPL36|64979|mitochondrial ribosomal protein L36##AF151109|MRPL36|64979|mitochondrial ribosomal protein L36##AF155653|MRPL36|64979|mitochondrial ribosomal protein L36##BC020642|MRPL36|64979|mitochondrial ribosomal protein L36##AK312001|MRPL36|64979|mitochondrial ribosomal protein L36##BC104652|MRPL36|64979|mitochondrial ribosomal protein L36##EF036487|MRPL36|64979|mitochondrial ribosomal protein L36##NM_032479|MRPL36|64979|mitochondrial ribosomal protein L36##NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	0.22579	CTCF.p2:-17:0.226
chr8	137726399	137726552	reg1003477.p1	11.102	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-1256274	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-1256817	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-2001201	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	1782631	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2199769	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	2988807	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.824606	CTCF.p2:79:0.814
chr8	42270001	42270098	reg1006850.p1	11.102	+	TSC_hg19_v1_chr8_+_42249394 AK307224 AK058201 AK308760 BC056870 BC002456	-20638	+	TSC_hg19_v1_chr8_+_42249386 AF038962	-20662	+	NM_001135694 NM_005662 TSC_hg19_v1_chr8_+_42249355	-20731	+	NM_001135676	126248	+	TSC_hg19_v1_chr8_-_42396648 AK314774	126602	-	TSC_hg19_v1_chr8_+_42396791 NM_138436 BC013035 NM_001135674 NM_001135675	126778	+	AK307224|VDAC3|7419|voltage-dependent anion channel 3##AK058201|VDAC3|7419|voltage-dependent anion channel 3##AK308760|VDAC3|7419|voltage-dependent anion channel 3##BC056870|VDAC3|7419|voltage-dependent anion channel 3##AF038962|VDAC3|7419|voltage-dependent anion channel 3##NM_001135694|VDAC3|7419|voltage-dependent anion channel 3##NM_005662|VDAC3|7419|voltage-dependent anion channel 3##NM_001135676|C8orf40|114926|chromosome 8 open reading frame 40##AK314774|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##NM_138436|C8orf40|114926|chromosome 8 open reading frame 40##BC013035|C8orf40|114926|chromosome 8 open reading frame 40##NM_001135674|C8orf40|114926|chromosome 8 open reading frame 40##NM_001135675|C8orf40|114926|chromosome 8 open reading frame 40	0.423245	CTCF.p2:-7:0.423
chr1	156629848	156630003	reg1009205.p1	11.101	+	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	-17971	+	TSC_hg19_v1_chr1_+_156611723 AY358372 NM_021948 NM_198427	-18196	+	AB049054 NM_021817 AK294131 AK310758 AK308805 AK090712 AK308980 AK293797 BC029864	-40739	+	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	17220	-	BT019827 CR450357 DQ892265 DQ896851 M68867 BC001109 AB593017 AK312007 TSC_hg19_v1_chr1_-_156675376 NM_001878 NM_001199723	45497	-	AY391837 AK022733 NM_030980	67743	-	AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##AY358372|BCAN|63827|brevican##NM_021948|BCAN|63827|brevican##NM_198427|BCAN|63827|brevican##AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin##BT019827|CRABP2|1382|cellular retinoic acid binding protein 2##CR450357|CRABP2|1382|cellular retinoic acid binding protein 2##DQ892265|CRABP2|1382|cellular retinoic acid binding protein 2##DQ896851|CRABP2|1382|cellular retinoic acid binding protein 2##M68867|CRABP2|1382|cellular retinoic acid binding protein 2##BC001109|CRABP2|1382|cellular retinoic acid binding protein 2##AB593017|CRABP2|1382|cellular retinoic acid binding protein 2##AK312007|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001878|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001199723|CRABP2|1382|cellular retinoic acid binding protein 2##AY391837|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK022733|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_030980|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2	1.884912	CTCF.p2:-19:1.000	CTCF.p2:79:0.885
chr5	148814130	148814263	reg1011324.p1	11.099	+	TSC_hg19_v1_chr5_+_148786440 AK126481 CR933654 BX640700	-27714	+	AB590699 CR457192 BC113925 BC113946 AF152098 AF184969 AF218727 AY358931 AF110385 AF212311 NM_014443 TSC_hg19_v1_chr5_-_148758856	-55374	-	TSC_hg19_v1_chr5_+_148737613 AF451985 BC000014	-76573	+	AF218004 TSC_hg19_v1_chr5_-_148930935 AK303794 BC021971 BC025371 BC007246	116728	-	TSC_hg19_v1_chr5_-_148930950 AK294942	116770	-	TSC_hg19_v1_chr5_-_148931006 NM_001025105 NM_001892	116810	-	AK126481|MIR143HG|728264|MIR143 host gene (non-protein coding)##CR933654|MIR143HG|728264|MIR143 host gene (non-protein coding)##CR457192|IL17B|27190|interleukin 17B##BC113925|IL17B|27190|interleukin 17B##BC113946|IL17B|27190|interleukin 17B##AF152098|IL17B|27190|interleukin 17B##AF184969|IL17B|27190|interleukin 17B##AF218727|IL17B|27190|interleukin 17B##AY358931|IL17B|27190|interleukin 17B##AF110385|IL17B|27190|interleukin 17B##AF212311|IL17B|27190|interleukin 17B##NM_014443|IL17B|27190|interleukin 17B##AF451985|PCYOX1L|78991|prenylcysteine oxidase 1 like##BC000014|PCYOX1L|78991|prenylcysteine oxidase 1 like##AF218004|CSNK1A1|1452|casein kinase 1, alpha 1##AK303794|CSNK1A1|1452|casein kinase 1, alpha 1##BC021971|CSNK1A1|1452|casein kinase 1, alpha 1##BC025371|CSNK1A1|1452|casein kinase 1, alpha 1##BC007246|CSNK1A1|1452|casein kinase 1, alpha 1##AK294942|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001025105|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001892|CSNK1A1|1452|casein kinase 1, alpha 1	0.996774	CTCF.p2:7:0.997
chr8	95725736	95725857	reg1008673.p1	11.099	+	TSC_hg19_v1_chr8_+_95653401 BC099916 BC067098 BC019932 BC052574	-72352	+	TSC_hg19_v1_chr8_+_95653392 NM_001034915 NM_001122825 NM_001122826 NM_001122827 NM_017697	-72430	+	TSC_hg19_v1_chr8_+_95653284 BX647570	-72504	+	TSC_hg19_v1_chr8_+_95732105 NM_181787 AK123682 BX538174 BX538048 BC110870	6344	+	TSC_hg19_v1_chr8_+_95732206 BC126193 BC130576	6414	+	TSC_hg19_v1_chr8_+_95835522 BC099915 AB161944 NM_017864	109752	+	BC099916|ESRP1|54845|epithelial splicing regulatory protein 1##BC067098|ESRP1|54845|epithelial splicing regulatory protein 1##BC019932|ESRP1|54845|epithelial splicing regulatory protein 1##BC052574|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001034915|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122825|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122826|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122827|ESRP1|54845|epithelial splicing regulatory protein 1##NM_017697|ESRP1|54845|epithelial splicing regulatory protein 1##BX647570|ESRP1|54845|epithelial splicing regulatory protein 1##NM_181787|DPY19L4|286148|dpy-19-like 4 (C. elegans)##AK123682|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BX538174|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BX538048|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC110870|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC126193|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC130576|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC099915|INTS8|55656|integrator complex subunit 8##AB161944|INTS8|55656|integrator complex subunit 8##NM_017864|INTS8|55656|integrator complex subunit 8	0.996166	CTCF.p2:2:0.996
chr3	33173239	33173373	reg1010866.p1	11.098	+	TSC_hg19_v1_chr3_+_33155562 AJ006470 CU679079 DQ893221 DQ896550	-17733	+	TSC_hg19_v1_chr3_+_33155553 NM_006371 AK314719 AK298250 AK075401 AK126433 AK001634 AK091772 BC008745 AK097650 AK092990	-17806	+	AK223091 AK300753 TSC_hg19_v1_chr3_-_33138639 NM_000404 NM_001135602	-34625	-	AB011099 NM_015551	87400	-	TSC_hg19_v1_chr3_+_33318965 AK001271 NM_012157 AK302218 NM_001171713 AK303764 AK299665 AK294209 AF174589 AK316229 AK001438 AK298967 AK297534 AF186273 BC031556	145644	+	AK023274 AF198487 TSC_hg19_v1_chr3_-_33481564	308230	-	AJ006470|CRTAP|10491|cartilage associated protein##DQ893221|CRTAP|10491|cartilage associated protein##DQ896550|CRTAP|10491|cartilage associated protein##NM_006371|CRTAP|10491|cartilage associated protein##AK314719|CRTAP|10491|cartilage associated protein##AK298250|CRTAP|10491|cartilage associated protein##AK075401|CRTAP|10491|cartilage associated protein##AK126433|CRTAP|10491|cartilage associated protein##AK001634|CRTAP|10491|cartilage associated protein##AK091772|CRTAP|10491|cartilage associated protein##BC008745|CRTAP|10491|cartilage associated protein##AK097650|CRTAP|10491|cartilage associated protein##AK092990|CRTAP|10491|cartilage associated protein##AK223091|GLB1|2720|galactosidase, beta 1##AK300753|GLB1|2720|galactosidase, beta 1##NM_000404|GLB1|2720|galactosidase, beta 1##NM_001135602|GLB1|2720|galactosidase, beta 1##AB011099|SUSD5|26032|sushi domain containing 5##NM_015551|SUSD5|26032|sushi domain containing 5##AK001271|FBXL2|25827|F-box and leucine-rich repeat protein 2##NM_012157|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK302218|FBXL2|25827|F-box and leucine-rich repeat protein 2##NM_001171713|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK303764|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK299665|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK294209|FBXL2|25827|F-box and leucine-rich repeat protein 2##AF174589|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK316229|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK001438|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK298967|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK297534|FBXL2|25827|F-box and leucine-rich repeat protein 2##AF186273|FBXL2|25827|F-box and leucine-rich repeat protein 2##BC031556|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK023274|UBP1|7342|upstream binding protein 1 (LBP-1a)##AF198487|UBP1|7342|upstream binding protein 1 (LBP-1a)	0.938228	CTCF.p2:-20:0.938
chr11	107447356	107447476	reg1007581.p2	11.097	+	AK293603 TSC_hg19_v1_chr11_-_107436464 BC015183 AK304413 AB218768 AK095523 NM_138775	-10972	-	AK293001 TSC_hg19_v1_chr11_-_107328552 BX649022 BX647832 BC107418 BC070142 BX648704 AK126881 NM_152434	-118877	-	BC085622 TSC_hg19_v1_chr11_-_106889260 BC130484 BC130488 BC144033 NM_000855 X63282 Z50053	-558328	-	TSC_hg19_v1_chr11_+_107461813 AK297351 NM_001130037 NM_018712	14395	+	TSC_hg19_v1_chr11_+_107461998 AK303689 AK054794	14569	+	TSC_hg19_v1_chr11_+_107462073 BC028725	14660	+	AK293603|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##BC015183|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK304413|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AB218768|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK095523|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##NM_138775|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK293001|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX649022|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX647832|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC107418|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC070142|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX648704|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK126881|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##NM_152434|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC130484|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC130488|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC144033|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_000855|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##X63282|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##Z50053|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK303689|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK054794|ELMOD1|55531|ELMO/CED-12 domain containing 1##BC028725|ELMOD1|55531|ELMO/CED-12 domain containing 1	0.997508	CTCF.p2:-7:0.998
chr11	45127190	45127291	reg1007990.p2	11.097	+	AF275818 NM_020229	-11677	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	-154823	-	TSC_hg19_v1_chr11_-_44956087 AF010315	-171133	-	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	180510	-	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	559944	-	NM_001145265 NM_001145266	698382	+	AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1	0.999282	CTCF.p2:0:0.999
chr1	147112680	147112789	reg1008575.p2	11.097	+	NM_004326 Y13620 AK298105 TSC_hg19_v1_chr1_+_147013319	-99483	+	TSC_hg19_v1_chr1_+_146714335 AK298424 AK297135 BC077717 AK293157 BC001171 AF054177 BC043501 BC053354 BC005038	-398370	+	NM_004284 TSC_hg19_v1_chr1_+_146714333 EF560738 AF537213 AK001342 AK027631 AK307400	-398423	+	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	29760	-	BC013313 NM_181703	119964	-	NM_005266	132749	-	NM_004326|BCL9|607|B-cell CLL/lymphoma 9##Y13620|BCL9|607|B-cell CLL/lymphoma 9##AK298424|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK297135|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC077717|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK293157|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC001171|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF054177|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC043501|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC053354|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC005038|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##NM_004284|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##EF560738|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF537213|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK001342|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK027631|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK307400|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_005266|GJA5|2702|gap junction protein, alpha 5, 40kDa	0.999304	CTCF.p2:-4:0.999
chr16	28627369	28627478	reg1008390.p2	11.096	+	L10819 TSC_hg19_v1_chr16_-_28621339 BC000923 L19999 NM_001055 NM_177529	-6101	-	NM_177530 NM_177534	-6775	-	BC025763 U28170 BC113727 BC113729 U28169 NM_001054	-19045	-	BC048316 TSC_hg19_v1_chr16_-_28634894 NM_177536	7466	-	AK292155 NM_001199142 BC157842	72510	+	BC107692 NM_001037808 NM_003752 TSC_hg19_v1_chr16_+_28722786 AK301183 NM_001099661 AK301233 AK304500 AK055366 AK299421 AK303790 BC001571 BC000533 AY762099 AK293264 AK000739 BC071705	95396	+	L10819|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##BC000923|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##L19999|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##NM_001055|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##NM_177529|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##NM_177530|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##NM_177534|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##BC025763|SULT1A2|6799|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2##U28170|SULT1A2|6799|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2##BC113727|SULT1A2|6799|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2##BC113729|SULT1A2|6799|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2##U28169|SULT1A2|6799|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2##NM_001054|SULT1A2|6799|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2##NM_177536|SULT1A1|6817|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C	0.830069	CTCF.p2:-14:0.830
chr20	17485607	17485757	reg1008692.p1	11.096	+	TSC_hg19_v1_chr20_+_17207684 BC005815 AK294200 AK312341 J05252 AB528512 DQ892675 DQ895917	-277867	+	BC001905 TSC_hg19_v1_chr20_+_17207673	-278011	+	NM_001201529 NM_002594 TSC_hg19_v1_chr20_+_17207617	-278072	+	AF039655 Y16717 TSC_hg19_v1_chr20_-_17512006 NM_001195	26310	-	AK316247 BC041483 NM_001161705	53860	-	NM_001011546 NM_006870 TSC_hg19_v1_chr20_+_17550756 AK315994 BC009477 AK312645 BX647319 S65738 AK302338	65057	+	BC005815|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK294200|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK312341|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##J05252|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##DQ892675|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##DQ895917|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201529|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AF039655|BFSP1|631|beaded filament structural protein 1, filensin##Y16717|BFSP1|631|beaded filament structural protein 1, filensin##NM_001195|BFSP1|631|beaded filament structural protein 1, filensin##AK316247|BFSP1|631|beaded filament structural protein 1, filensin##BC041483|BFSP1|631|beaded filament structural protein 1, filensin##NM_001161705|BFSP1|631|beaded filament structural protein 1, filensin##NM_001011546|DSTN|11034|destrin (actin depolymerizing factor)##NM_006870|DSTN|11034|destrin (actin depolymerizing factor)##AK315994|DSTN|11034|destrin (actin depolymerizing factor)##BC009477|DSTN|11034|destrin (actin depolymerizing factor)##AK312645|DSTN|11034|destrin (actin depolymerizing factor)##BX647319|DSTN|11034|destrin (actin depolymerizing factor)##S65738|DSTN|11034|destrin (actin depolymerizing factor)##AK302338|DSTN|11034|destrin (actin depolymerizing factor)	0.966994	CTCF.p2:-37:0.967
chr8	49231385	49231517	reg1010292.p1	11.096	+	TSC_hg19_v1_chr8_+_48920990 BC016332 BC016710 BC007051 AK313447 U62136 AF049140 BC028673 BC062418 NM_003350	-310470	+	AK022899 TSC_hg19_v1_chr8_+_48873533 BC031061 AB590735	-357833	+	TSC_hg19_v1_chr8_+_48873513 AK296913	-357938	+	AK021829 BC025676 BC029586 AK316037 AK299659 AK307101 NM_001142857 NM_024593	416342	-	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	602459	-	NM_001007176 BC017981 AJ276240	753458	+	BC016332|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC016710|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC007051|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AK313447|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##U62136|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AF049140|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC028673|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC062418|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##NM_003350|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AK022899|MCM4|4173|minichromosome maintenance complex component 4##BC031061|MCM4|4173|minichromosome maintenance complex component 4##AK296913|MCM4|4173|minichromosome maintenance complex component 4##AK021829|EFCAB1|79645|EF-hand calcium binding domain 1##BC025676|EFCAB1|79645|EF-hand calcium binding domain 1##BC029586|EFCAB1|79645|EF-hand calcium binding domain 1##AK316037|EFCAB1|79645|EF-hand calcium binding domain 1##AK299659|EFCAB1|79645|EF-hand calcium binding domain 1##AK307101|EFCAB1|79645|EF-hand calcium binding domain 1##NM_001142857|EFCAB1|79645|EF-hand calcium binding domain 1##NM_024593|EFCAB1|79645|EF-hand calcium binding domain 1##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22	1.013712	CTCF.p2:-15:0.967
chr1	84397494	84397610	reg1008959.p1	11.095	+	TSC_hg19_v1_chr1_-_84326677 BC036594	-70876	-	AK097722 TSC_hg19_v1_chr1_-_84326308	-71284	-	AF104266 AF104938 AF104939 NM_012302	-2131471	+	AK126792 BC048970 BC032829 TSC_hg19_v1_chr1_-_84464848 BC060878 BC028350 NM_024686	67244	-	TSC_hg19_v1_chr1_+_84543744 AK074904 BC037304 BC035058 NM_002731 NM_207578 AK314550 BC016285 M34181 AB463197 AM392526 AM393233 AM393317 AM393497 CU677593 EU832783 GQ129404 AB451239 AB451364	146284	+	TSC_hg19_v1_chr1_+_84609953 NM_182948 BX537705 BX641026	212405	+	AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2##AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##AK074904|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BC035058|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_002731|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_207578|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK314550|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BC016285|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##M34181|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM392526|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM393233|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM393317|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM393497|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##EU832783|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##GQ129404|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AB451239|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AB451364|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_182948|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BX537705|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BX641026|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	0.847475	CTCF.p2:-10:0.847
chr19	1618316	1618426	reg1006982.p2	11.095	+	TSC_hg19_v1_chr19_-_1605464 NM_006830	-12898	-	AK312053 TSC_hg19_v1_chr19_-_1605462	-12909	-	TSC_hg19_v1_chr19_-_1605429 BC000462 BC003594 D55636	-12940	-	AB385055 BC110579 BC110580 M31523 NM_001136139	31894	-	M31222 NM_003200 TSC_hg19_v1_chr19_-_1652346	33968	-	NM_001080488 TSC_hg19_v1_chr19_+_1753823	135381	+	NM_006830|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##AK312053|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##BC000462|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##BC003594|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##D55636|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##BC110580|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##M31523|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_001136139|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_001080488|ONECUT3|390874|one cut homeobox 3	0.558507	CTCF.p2:5:0.559
chr6	107435537	107435674	reg1007985.p1	11.095	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	-86133	+	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	-358108	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	-358325	-	BC131628 NM_001080450	30	-	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	345125	-	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	375823	+	NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203##NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)	0.981247	CTCF.p2:15:0.981
chr7	11251825	11251961	reg1011179.p1	11.095	+	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	-238383	+	AK130950 TSC_hg19_v1_chr7_-_10979760 AK024837 U94586 BC105295 NM_002489	-272109	-	CR407618 CR541716 TSC_hg19_v1_chr7_-_10979730 AF201077 BC101794 BC101796	-272184	-	TSC_hg19_v1_chr7_-_11871825 AK092252 AX747433 NM_015204	619896	-	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	999032	+	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	1191639	-	AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14##AK130950|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK024837|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##U94586|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC105295|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_002489|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR407618|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR541716|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AF201077|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101794|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101796|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains	0.988453	CTCF.p2:9:0.988
chr9	87012125	87012234	reg1008028.p1	11.095	+	AF305210 NM_022127	-28767	-	BC093821 BC093823 AK310861 AK304406 AK314039 AK292849 NM_001199633	-56545	-	NM_024945 TSC_hg19_v1_chr9_+_86595689 BC039999 BC020606 AK022950 BC044571 BC053549 BC032494	-416470	+	TSC_hg19_v1_chr9_+_87283453 BC075804 NM_001018064 NM_006180 AB209118	271282	+	TSC_hg19_v1_chr9_+_87284577 NM_001018065 NM_001018066	272404	+	NM_001007097 TSC_hg19_v1_chr9_+_87284627	272447	+	AF305210|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_022127|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093821|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093823|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK310861|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK304406|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK314039|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK292849|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_001199633|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_024945|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC039999|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC020606|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##AK022950|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC044571|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC053549|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC032494|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC075804|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018064|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_006180|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB209118|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018065|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018066|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001007097|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	0.992319	CTCF.p2:-9:0.992
chr14	55272649	55272753	reg1008340.p2	11.094	+	NM_001161577 BC021726	-51174	+	TSC_hg19_v1_chr14_+_55168831 AB028976	-103812	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	-238065	+	AY137463 AY137464 AY137465 Z16418 S44049 CR536551 DQ892998 DQ896245 S43856 S44053 TSC_hg19_v1_chr14_-_55369545 Z29433 Z29434 U66095 BC025415 U19523 U66097 NM_000161 NM_001024024 NM_001024070 NM_001024071	96713	-	TSC_hg19_v1_chr14_-_55493780 BC000622 BC005040 AK293005 BC063041	221084	-	TSC_hg19_v1_chr14_-_55493818 BC043349 NM_001008396 NM_007086	221110	-	NM_001161577|SAMD4A|23034|sterile alpha motif domain containing 4A##BC021726|SAMD4A|23034|sterile alpha motif domain containing 4A##AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A##AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##AY137463|GCH1|2643|GTP cyclohydrolase 1##AY137464|GCH1|2643|GTP cyclohydrolase 1##AY137465|GCH1|2643|GTP cyclohydrolase 1##Z16418|GCH1|2643|GTP cyclohydrolase 1##S44049|GCH1|2643|GTP cyclohydrolase 1##CR536551|GCH1|2643|GTP cyclohydrolase 1##DQ892998|GCH1|2643|GTP cyclohydrolase 1##DQ896245|GCH1|2643|GTP cyclohydrolase 1##S43856|GCH1|2643|GTP cyclohydrolase 1##S44053|GCH1|2643|GTP cyclohydrolase 1##Z29433|GCH1|2643|GTP cyclohydrolase 1##Z29434|GCH1|2643|GTP cyclohydrolase 1##U66095|GCH1|2643|GTP cyclohydrolase 1##BC025415|GCH1|2643|GTP cyclohydrolase 1##U19523|GCH1|2643|GTP cyclohydrolase 1##U66097|GCH1|2643|GTP cyclohydrolase 1##NM_000161|GCH1|2643|GTP cyclohydrolase 1##NM_001024024|GCH1|2643|GTP cyclohydrolase 1##NM_001024070|GCH1|2643|GTP cyclohydrolase 1##NM_001024071|GCH1|2643|GTP cyclohydrolase 1##BC000622|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC005040|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##AK293005|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC063041|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC043349|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_001008396|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_007086|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1	0.999909	CTCF.p2:4:1.000
chr18	47730470	47730571	reg1007748.p1	11.094	+	AB384567 AB032945 TSC_hg19_v1_chr18_-_47721518 AB290160 BC032511 NM_001080467	-9148	-	TSC_hg19_v1_chr18_-_47376221 BC033527	-354331	-	TSC_hg19_v1_chr18_+_47340396 AK123464	-390129	+	AB527886 BC030606 NM_145020 AK302114	62312	-	AF078830 AF078831 AF078832 AF078833 EF488685 AB527669 NM_001204151	75853	-	AK295401 TSC_hg19_v1_chr18_-_47807854 BC012487 BC047353 AK302004 AJ564845 Y10746 AK225948	77249	-	AB032945|MYO5B|4645|myosin VB##AB290160|MYO5B|4645|myosin VB##BC032511|MYO5B|4645|myosin VB##NM_001080467|MYO5B|4645|myosin VB##BC033527|MYO5B|4645|myosin VB##BC030606|CCDC11|220136|coiled-coil domain containing 11##NM_145020|CCDC11|220136|coiled-coil domain containing 11##AK302114|CCDC11|220136|coiled-coil domain containing 11##AF078830|MBD1|4152|methyl-CpG binding domain protein 1##AF078831|MBD1|4152|methyl-CpG binding domain protein 1##AF078832|MBD1|4152|methyl-CpG binding domain protein 1##AF078833|MBD1|4152|methyl-CpG binding domain protein 1##EF488685|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204151|MBD1|4152|methyl-CpG binding domain protein 1##AK295401|MBD1|4152|methyl-CpG binding domain protein 1##BC047353|MBD1|4152|methyl-CpG binding domain protein 1##AK302004|MBD1|4152|methyl-CpG binding domain protein 1##AJ564845|MBD1|4152|methyl-CpG binding domain protein 1##Y10746|MBD1|4152|methyl-CpG binding domain protein 1##AK225948|MBD1|4152|methyl-CpG binding domain protein 1	0.898012	CTCF.p2:5:0.898
chr19	4567683	4567799	reg1011518.p1	11.094	+	BC142617 TSC_hg19_v1_chr19_-_4559731 AK300037 NM_032108	-8000	-	AK127689 BC070198 TSC_hg19_v1_chr19_-_4540114	-27641	-	AF403428 NM_052972 BC034389 AB073607 AK027382 AK303861 AK314506 TSC_hg19_v1_chr19_-_4540049	-27697	-	NM_152362 TSC_hg19_v1_chr19_+_4639539 BC017672 AK097251	71797	+	NM_001167942	72287	+	BC003639 AL365373 AL365374 AF282264 AB590867 BC014655 AK098829 TSC_hg19_v1_chr19_-_4670355	102602	-	BC142617|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##AK300037|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##NM_032108|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##BC070198|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AF403428|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_052972|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##BC034389|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AB073607|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK027382|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK303861|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK314506|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_152362|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC017672|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##AK097251|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##NM_001167942|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC003639|C19orf10|56005|chromosome 19 open reading frame 10##AL365373|C19orf10|56005|chromosome 19 open reading frame 10##AL365374|C19orf10|56005|chromosome 19 open reading frame 10##AF282264|C19orf10|56005|chromosome 19 open reading frame 10##BC014655|C19orf10|56005|chromosome 19 open reading frame 10##AK098829|C19orf10|56005|chromosome 19 open reading frame 10	0.345957	CTCF.p2:5:0.346
chr3	118601331	118601465	reg1010902.p1	11.094	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-2437025	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-2437067	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-3258979	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	152135	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	152285	-	AK097667 NM_152538 AK292387	263499	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.99808	CTCF.p2:4:0.998
chr9	112336713	112336833	reg1008713.p2	11.094	+	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	-76184	-	BX648253 NM_001145369 NM_001145370	-123110	-	AK296265 AK296388 AK316118 NM_001145371 NM_001145372	-145560	-	BC039306 NM_001037293 AK095003	66296	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	205842	+	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	474136	+	BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BX648253|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145369|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145370|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2	0.175552	
chrX	109656500	109656628	reg1008592.p2	11.094	+	TSC_hg19_v1_chrX_-_109561428 AJ007014	-95118	-	TSC_hg19_v1_chrX_-_109561314 BX648797 NM_001025580 NM_015365	-95218	-	CU687440 TSC_hg19_v1_chrX_-_109561311 AK314596 BC060813	-95259	-	AB037739 AY121804 NM_020769	5720	+	AK091430 NM_001171689	26894	-	BC002909 AK293106 AK297563 AK312270 NM_145234	382469	-	AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BX648797|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001025580|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_015365|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AK314596|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC060813|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AB037739|RGAG1|57529|retrotransposon gag domain containing 1##AY121804|RGAG1|57529|retrotransposon gag domain containing 1##NM_020769|RGAG1|57529|retrotransposon gag domain containing 1##AK091430|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001171689|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC002909|CHRDL1|91851|chordin-like 1##AK293106|CHRDL1|91851|chordin-like 1##AK297563|CHRDL1|91851|chordin-like 1##AK312270|CHRDL1|91851|chordin-like 1##NM_145234|CHRDL1|91851|chordin-like 1	0.999544	CTCF.p2:-11:1.000
chr2	228103105	228103230	reg1009047.p1	11.093	+	NM_000091 X80031 TSC_hg19_v1_chr2_+_228029337	-73857	+	NM_000092	-73893	-	TSC_hg19_v1_chr2_-_228028922 X81053	-74265	-	TSC_hg19_v1_chr2_+_228189983 AK026137 BC093024 AF258660	86877	+	AF246239 NM_020194	89060	+	AY358671 BC137256 BC137257 BC035754 TSC_hg19_v1_chr2_-_228244023 AK026453 NM_024795	140847	-	NM_000091|COL4A3|1285|collagen, type IV, alpha 3 (Goodpasture antigen)##X80031|COL4A3|1285|collagen, type IV, alpha 3 (Goodpasture antigen)##NM_000092|COL4A4|1286|collagen, type IV, alpha 4##X81053|COL4A4|1286|collagen, type IV, alpha 4##AK026137|MFF|56947|mitochondrial fission factor##BC093024|MFF|56947|mitochondrial fission factor##AF258660|MFF|56947|mitochondrial fission factor##AF246239|MFF|56947|mitochondrial fission factor##NM_020194|MFF|56947|mitochondrial fission factor##AY358671|TM4SF20|79853|transmembrane 4 L six family member 20##BC137256|TM4SF20|79853|transmembrane 4 L six family member 20##BC137257|TM4SF20|79853|transmembrane 4 L six family member 20##BC035754|TM4SF20|79853|transmembrane 4 L six family member 20##AK026453|TM4SF20|79853|transmembrane 4 L six family member 20##NM_024795|TM4SF20|79853|transmembrane 4 L six family member 20	0.985201	CTCF.p2:0:0.985
chr3	168229331	168229475	reg1011448.p1	11.093	+	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	-415972	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	-416288	-	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-775914	+	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	634676	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	634959	-	BX640908 NM_001164000	636118	-	AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus	0.996137	CTCF.p2:-7:0.996
chr9	102569682	102569802	reg1008234.p2	11.093	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-585155	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-585499	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-585525	-	TSC_hg19_v1_chr9_-_102582187 AK057451	12423	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	14415	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	99185	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.923059	CTCF.p2:0:0.923
chr16	77205761	77205886	reg1010381.p1	11.092	+	NM_138994 AK057327 BC017266	-862068	+	AB051550 NM_033401 TSC_hg19_v1_chr16_+_76311298	-894583	+	AK307901 NM_018975 TSC_hg19_v1_chr16_+_75681715 AK000669 BC022428 BC004465 BC005841 BC016739 BC078171 AF289599 AF250393 AB464292 CU678732 AF262988	-1524116	+	TSC_hg19_v1_chr16_+_77224857 BC024277 NM_014940	19019	+	AK023374 TSC_hg19_v1_chr16_+_77224865	19062	+	TSC_hg19_v1_chr16_+_77225092 AK023896 AK296467	19251	+	NM_138994|CNTNAP4|85445|contactin associated protein-like 4##AK057327|CNTNAP4|85445|contactin associated protein-like 4##BC017266|CNTNAP4|85445|contactin associated protein-like 4##AB051550|CNTNAP4|85445|contactin associated protein-like 4##NM_033401|CNTNAP4|85445|contactin associated protein-like 4##AK307901|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##NM_018975|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AK000669|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC022428|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC004465|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC005841|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC016739|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC078171|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF289599|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF250393|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF262988|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC024277|MON1B|22879|MON1 homolog B (yeast)##NM_014940|MON1B|22879|MON1 homolog B (yeast)##AK023374|MON1B|22879|MON1 homolog B (yeast)##AK023896|MON1B|22879|MON1 homolog B (yeast)##AK296467|MON1B|22879|MON1 homolog B (yeast)	0.999671	CTCF.p2:14:1.000
chr2	24387394	24387557	reg1008767.p1	11.092	+	TSC_hg19_v1_chr2_+_24346339 NM_001145710	-41116	+	TSC_hg19_v1_chr2_-_24346174 BC029523 NM_199346 BC043236 AK292601	-41231	-	TSC_hg19_v1_chr2_-_24307733 AK297579 BC000474 BC018819 AF010309 AK223382 NM_004881 NM_147184	-79634	-	BC050462 NM_001040710	10496	+	TSC_hg19_v1_chr2_-_24583385 AB033082 BC146779 AF182198 AF182199 BC038963 NM_006277 NM_019595 NM_147152	196005	-	NM_003743 NM_147223 NM_147233 AJ000881 AJ000882 U59302	419902	+	NM_001145710|LOC375190|375190|UPF0638 protein B##BC029523|PFN4|375189|profilin family, member 4##NM_199346|PFN4|375189|profilin family, member 4##BC043236|PFN4|375189|profilin family, member 4##AK292601|PFN4|375189|profilin family, member 4##AK297579|TP53I3|9540|tumor protein p53 inducible protein 3##BC000474|TP53I3|9540|tumor protein p53 inducible protein 3##BC018819|TP53I3|9540|tumor protein p53 inducible protein 3##AF010309|TP53I3|9540|tumor protein p53 inducible protein 3##AK223382|TP53I3|9540|tumor protein p53 inducible protein 3##NM_004881|TP53I3|9540|tumor protein p53 inducible protein 3##NM_147184|TP53I3|9540|tumor protein p53 inducible protein 3##BC050462|C2orf84|653140|chromosome 2 open reading frame 84##NM_001040710|C2orf84|653140|chromosome 2 open reading frame 84##AB033082|ITSN2|50618|intersectin 2##BC146779|ITSN2|50618|intersectin 2##AF182198|ITSN2|50618|intersectin 2##AF182199|ITSN2|50618|intersectin 2##BC038963|ITSN2|50618|intersectin 2##NM_006277|ITSN2|50618|intersectin 2##NM_019595|ITSN2|50618|intersectin 2##NM_147152|ITSN2|50618|intersectin 2##NM_003743|NCOA1|8648|nuclear receptor coactivator 1##NM_147223|NCOA1|8648|nuclear receptor coactivator 1##NM_147233|NCOA1|8648|nuclear receptor coactivator 1##AJ000881|NCOA1|8648|nuclear receptor coactivator 1##AJ000882|NCOA1|8648|nuclear receptor coactivator 1##U59302|NCOA1|8648|nuclear receptor coactivator 1	3.039838	CTCF.p2:7:0.998	CTCF.p2:-21:0.998	CTCF.p2:-50:0.998
chr7	100494852	100494964	reg1008364.p1	11.092	+	BC105060 BC105062 BC143469 AK291321 TSC_hg19_v1_chr7_-_100493509 BC001541 AK223443 AF334270 BC026315 BC036813 NM_000665 NM_015831	-1397	-	BC017456 BC067904 AK292467 NM_001015072	-7603	-	TSC_hg19_v1_chr7_+_100472809 BC109116	-22082	+	AK130455 TSC_hg19_v1_chr7_+_100612694	117785	+	NM_001164462	117995	+	TSC_hg19_v1_chr7_+_100663360 AJ606307 AJ606308 NM_001040105	168457	+	BC105060|ACHE|43|acetylcholinesterase##BC105062|ACHE|43|acetylcholinesterase##BC143469|ACHE|43|acetylcholinesterase##AK291321|ACHE|43|acetylcholinesterase##BC001541|ACHE|43|acetylcholinesterase##AK223443|ACHE|43|acetylcholinesterase##AF334270|ACHE|43|acetylcholinesterase##BC026315|ACHE|43|acetylcholinesterase##BC036813|ACHE|43|acetylcholinesterase##NM_000665|ACHE|43|acetylcholinesterase##NM_015831|ACHE|43|acetylcholinesterase##BC017456|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##BC067904|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##AK292467|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##NM_001015072|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##BC109116|SRRT|51593|serrate RNA effector molecule homolog (Arabidopsis)##NM_001164462|MUC12|10071|mucin 12, cell surface associated##AJ606307|MUC17|140453|mucin 17, cell surface associated##AJ606308|MUC17|140453|mucin 17, cell surface associated##NM_001040105|MUC17|140453|mucin 17, cell surface associated	0.995969	CTCF.p2:3:0.996
chr9	3441334	3441461	reg1010702.p1	11.092	+	AK127804 TSC_hg19_v1_chr9_-_3223066	-218361	-	TSC_hg19_v1_chr9_-_2844102 AK315531 NM_014878	-597284	-	TSC_hg19_v1_chr9_-_2844084 AL832245 AK225953 AL832239	-597308	-	TSC_hg19_v1_chr9_-_3525889 AK310956 AK289540	84442	-	TSC_hg19_v1_chr9_-_3525983 BC022191 NM_002919 NM_134428	84607	-	TSC_hg19_v1_chr9_+_3526079 AK125504	84691	+	AK315531|KIAA0020|9933|KIAA0020##NM_014878|KIAA0020|9933|KIAA0020##AL832245|KIAA0020|9933|KIAA0020##AK225953|KIAA0020|9933|KIAA0020##AL832239|KIAA0020|9933|KIAA0020##AK310956|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK289540|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##BC022191|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_002919|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_134428|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)	0.445923	CTCF.p2:5:0.446
chr1	109736417	109736543	reg1011181.p1	11.091	+	BC125208 TSC_hg19_v1_chr1_+_109656794 AK297221 AK297478 AK304003	-79693	+	TSC_hg19_v1_chr1_+_109656726 AK057647	-79754	+	TSC_hg19_v1_chr1_+_109656574 NM_020775	-79880	+	TSC_hg19_v1_chr1_+_109756523 NM_006513	20019	+	BC111398 X91257 TSC_hg19_v1_chr1_+_109756539	20059	+	TSC_hg19_v1_chr1_+_109756553 AK222677 AK312771	20070	+	BC125208|KIAA1324|57535|KIAA1324##AK297221|KIAA1324|57535|KIAA1324##AK297478|KIAA1324|57535|KIAA1324##AK304003|KIAA1324|57535|KIAA1324##AK057647|KIAA1324|57535|KIAA1324##NM_020775|KIAA1324|57535|KIAA1324##NM_006513|SARS|6301|seryl-tRNA synthetase##BC111398|SARS|6301|seryl-tRNA synthetase##X91257|SARS|6301|seryl-tRNA synthetase##AK222677|SARS|6301|seryl-tRNA synthetase##AK312771|SARS|6301|seryl-tRNA synthetase	0.049494	
chr1	30322050	30322175	reg1010091.p1	11.090	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-759064	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-764665	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-764732	-	TSC_hg19_v1_chr1_+_31191648 AK057725	869519	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	874320	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	908520	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	0.998045	CTCF.p2:8:0.998
chr19	55652752	55652849	reg1007621.p2	11.090	+	AB209452 TSC_hg19_v1_chr19_-_55629006 AF312028 NM_017607	-23868	-	AK000265 AK301615 NM_017729 BC015763 CU677435	-60991	+	AK309305 NM_133180 AF370395 AK075098 AK296732	-65555	+	TSC_hg19_v1_chr19_-_55658311 AY762903 AY762904 BT019630 S51938	5617	-	S69208 S69209 BC022086 BC010963 AK291352 AK308199 BC007074 BC034143 BC107798 M19308 M19309 TSC_hg19_v1_chr19_-_55660575 NM_001126132 NM_001126133 NM_003283	7781	-	BT019517 CR541985 CR542012 M64247 BC096165 BC096166 BC096167 BC099631 X54163 AK223451 EU747720 NM_000363	16227	-	AB209452|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##AF312028|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##NM_017607|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##AK000265|EPS8L1|54869|EPS8-like 1##AK301615|EPS8L1|54869|EPS8-like 1##NM_017729|EPS8L1|54869|EPS8-like 1##BC015763|EPS8L1|54869|EPS8-like 1##AK309305|EPS8L1|54869|EPS8-like 1##NM_133180|EPS8L1|54869|EPS8-like 1##AF370395|EPS8L1|54869|EPS8-like 1##AK075098|EPS8L1|54869|EPS8-like 1##AK296732|EPS8L1|54869|EPS8-like 1##AY762903|TNNT1|7138|troponin T type 1 (skeletal, slow)##AY762904|TNNT1|7138|troponin T type 1 (skeletal, slow)##BT019630|TNNT1|7138|troponin T type 1 (skeletal, slow)##S51938|TNNT1|7138|troponin T type 1 (skeletal, slow)##S69208|TNNT1|7138|troponin T type 1 (skeletal, slow)##S69209|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC022086|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC010963|TNNT1|7138|troponin T type 1 (skeletal, slow)##AK291352|TNNT1|7138|troponin T type 1 (skeletal, slow)##AK308199|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC007074|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC034143|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC107798|TNNT1|7138|troponin T type 1 (skeletal, slow)##M19308|TNNT1|7138|troponin T type 1 (skeletal, slow)##M19309|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_001126132|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_001126133|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_003283|TNNT1|7138|troponin T type 1 (skeletal, slow)##BT019517|TNNI3|7137|troponin I type 3 (cardiac)##CR541985|TNNI3|7137|troponin I type 3 (cardiac)##CR542012|TNNI3|7137|troponin I type 3 (cardiac)##M64247|TNNI3|7137|troponin I type 3 (cardiac)##BC096165|TNNI3|7137|troponin I type 3 (cardiac)##BC096166|TNNI3|7137|troponin I type 3 (cardiac)##BC096167|TNNI3|7137|troponin I type 3 (cardiac)##BC099631|TNNI3|7137|troponin I type 3 (cardiac)##X54163|TNNI3|7137|troponin I type 3 (cardiac)##AK223451|TNNI3|7137|troponin I type 3 (cardiac)##EU747720|TNNI3|7137|troponin I type 3 (cardiac)##NM_000363|TNNI3|7137|troponin I type 3 (cardiac)	1.471735	CTCF.p2:-15:0.999	CTCF.p2:-89:0.472
chr14	21325938	21326063	reg1009752.p1	11.089	+	TSC_hg19_v1_chr14_-_21271004 AK312100 BC022882 BC005324 NM_002933 NM_198234 NM_198235	-54982	-	AK098375 NM_198232	-55453	-	BC020848 NM_005615 AK313580	-76782	+	TSC_hg19_v1_chr14_+_21359543 NM_002935 X15161 M28128 BC096060 BC096061 BC096062	33559	+	TSC_hg19_v1_chr14_+_21423628 NM_002934 X55988 BC093678 BC093680 M28129 M24157 BC096059 M30510	97648	+	NM_001029991 NM_022734	131964	+	AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##AK098375|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198232|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC020848|RNASE6|6039|ribonuclease, RNase A family, k6##NM_005615|RNASE6|6039|ribonuclease, RNase A family, k6##AK313580|RNASE6|6039|ribonuclease, RNase A family, k6##NM_002935|RNASE3|6037|ribonuclease, RNase A family, 3##X15161|RNASE3|6037|ribonuclease, RNase A family, 3##M28128|RNASE3|6037|ribonuclease, RNase A family, 3##BC096060|RNASE3|6037|ribonuclease, RNase A family, 3##BC096061|RNASE3|6037|ribonuclease, RNase A family, 3##BC096062|RNASE3|6037|ribonuclease, RNase A family, 3##NM_002934|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##X55988|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093678|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093680|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M28129|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M24157|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC096059|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M30510|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##NM_001029991|METTL17|64745|methyltransferase like 17##NM_022734|METTL17|64745|methyltransferase like 17	0.9965	CTCF.p2:-11:0.997
chr5	125879972	125880070	reg1008914.p1	11.089	+	NM_001146322 AK303857	-79205	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	-120834	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	-121178	+	TSC_hg19_v1_chr5_-_125930891 AB489160 EU831757 EU831835 S74728 BC073174 BC071712 AK295526 BC002515 AK312459 AK297365 NM_001182 NM_001201377 NM_001202404	50835	-	AK023255 NM_032177 TSC_hg19_v1_chr5_+_125936641 BC021161 AK024065 AK298497 AK225464 CR457305 DQ893213 DQ896542	56611	+	BC130495 BC130497 AK131015 NM_207408 HQ258080	87394	+	NM_001146322|GRAMD3|65983|GRAM domain containing 3##AK303857|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##EU831757|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##EU831835|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##S74728|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC073174|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC071712|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK295526|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC002515|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK312459|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK297365|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001182|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001201377|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001202404|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK023255|PHAX|51808|phosphorylated adaptor for RNA export##NM_032177|PHAX|51808|phosphorylated adaptor for RNA export##BC021161|PHAX|51808|phosphorylated adaptor for RNA export##AK024065|PHAX|51808|phosphorylated adaptor for RNA export##AK298497|PHAX|51808|phosphorylated adaptor for RNA export##AK225464|PHAX|51808|phosphorylated adaptor for RNA export##CR457305|PHAX|51808|phosphorylated adaptor for RNA export##DQ893213|PHAX|51808|phosphorylated adaptor for RNA export##DQ896542|PHAX|51808|phosphorylated adaptor for RNA export##BC130495|C5orf48|389320|chromosome 5 open reading frame 48##BC130497|C5orf48|389320|chromosome 5 open reading frame 48##AK131015|C5orf48|389320|chromosome 5 open reading frame 48##NM_207408|C5orf48|389320|chromosome 5 open reading frame 48##HQ258080|C5orf48|389320|chromosome 5 open reading frame 48	0.993643	CTCF.p2:-10:0.994
chr6	27486685	27486828	reg1008748.p1	11.089	+	TSC_hg19_v1_chr6_-_27440879 BC022992 AK123011 AK312804 NM_007149	-46055	-	TSC_hg19_v1_chr6_+_27356537 NM_001076781 AK092633 AK294965 AX747641 BC132797	-130201	+	AF352327 AF336874 BC107050 NM_032030	-194198	+	EU446971 TSC_hg19_v1_chr6_-_27775708 NM_003519 AK312114 BC093759 BC093761	288967	-	BC112254 BC112256 TSC_hg19_v1_chr6_+_27775950 AK311766 BC062305 NM_003509 HQ258047	289185	+	BC007518 TSC_hg19_v1_chr6_+_27777828 AK311991 NM_003536 EU446975 BC096128 BC096129 BC096130 BC143046 BC148243 BC148250	291026	+	BC022992|ZNF184|7738|zinc finger protein 184##AK123011|ZNF184|7738|zinc finger protein 184##AK312804|ZNF184|7738|zinc finger protein 184##NM_007149|ZNF184|7738|zinc finger protein 184##NM_001076781|ZNF391|346157|zinc finger protein 391##AK092633|ZNF391|346157|zinc finger protein 391##AK294965|ZNF391|346157|zinc finger protein 391##BC132797|ZNF391|346157|zinc finger protein 391##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83##EU446971|HIST1H2BL|8340|histone cluster 1, H2bl##NM_003519|HIST1H2BL|8340|histone cluster 1, H2bl##AK312114|HIST1H2BL|8340|histone cluster 1, H2bl##BC093759|HIST1H2BL|8340|histone cluster 1, H2bl##BC093761|HIST1H2BL|8340|histone cluster 1, H2bl##BC112254|HIST1H2AI|8329|histone cluster 1, H2ai##BC112256|HIST1H2AI|8329|histone cluster 1, H2ai##AK311766|HIST1H2AI|8329|histone cluster 1, H2ai##BC062305|HIST1H3F|8968|histone cluster 1, H3f##NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai##HQ258047|HIST1H2AM|8336|histone cluster 1, H2am##BC007518|HIST1H3H|8357|histone cluster 1, H3h##AK311991|HIST1H3H|8357|histone cluster 1, H3h##NM_003536|HIST1H3H|8357|histone cluster 1, H3h##EU446975|HIST1H3H|8357|histone cluster 1, H3h##BC096128|HIST1H3H|8357|histone cluster 1, H3h##BC096129|HIST1H3H|8357|histone cluster 1, H3h##BC096130|HIST1H3H|8357|histone cluster 1, H3h##BC143046|HIST1H3H|8357|histone cluster 1, H3h##BC148243|HIST1H3H|8357|histone cluster 1, H3h##BC148250|HIST1H3H|8357|histone cluster 1, H3h	0.209113	CTCF.p2:-5:0.209
chr13	87522764	87522900	reg1009041.p1	11.088	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-1149393	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-3066332	-	TSC_hg19_v1_chr13_-_84456424 BC051738	-3066407	-	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	802037	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	4528072	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	6356595	+	BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6	0.990646	CTCF.p2:-18:0.991
chr17	30394030	30394149	reg1010571.p1	11.088	+	AY386261 AK302740 BC117373 BC143578 BC143581 AK310287 NM_052888 HQ258530 AJ314647	-45996	+	AB385289 TSC_hg19_v1_chr17_+_30264319	-129795	+	TSC_hg19_v1_chr17_+_30264164 BC015704	-129926	+	TSC_hg19_v1_chr17_+_30469463 BC060781 NM_001033566 NM_001033568 NM_018307 AJ496730	75339	+	TSC_hg19_v1_chr17_+_30469520 BC041114	75433	+	TSC_hg19_v1_chr17_+_30469544 BC110895	75456	+	AY386261|LRRC37B|114659|leucine rich repeat containing 37B##AK302740|LRRC37B|114659|leucine rich repeat containing 37B##BC117373|LRRC37B|114659|leucine rich repeat containing 37B##BC143578|LRRC37B|114659|leucine rich repeat containing 37B##BC143581|LRRC37B|114659|leucine rich repeat containing 37B##AK310287|LRRC37B|114659|leucine rich repeat containing 37B##NM_052888|LRRC37B|114659|leucine rich repeat containing 37B##HQ258530|LRRC37B|114659|leucine rich repeat containing 37B##AJ314647|LRRC37B|114659|leucine rich repeat containing 37B##BC015704|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)##BC060781|RHOT1|55288|ras homolog gene family, member T1##NM_001033566|RHOT1|55288|ras homolog gene family, member T1##NM_001033568|RHOT1|55288|ras homolog gene family, member T1##NM_018307|RHOT1|55288|ras homolog gene family, member T1##AJ496730|RHOT1|55288|ras homolog gene family, member T1##BC041114|RHOT1|55288|ras homolog gene family, member T1##BC110895|RHOT1|55288|ras homolog gene family, member T1	0.988117	CTCF.p2:-4:0.988
chr6	118940045	118940180	reg1010173.p1	11.088	+	NM_002667 M63603 AK311799 BC005269	-70647	+	BC028615 NM_001029858 BC114925	-711422	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-943446	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	32924	-	BC110835 BC064835 NM_001178035	91121	-	NM_014034 AK025738 AL050261 BC010878 AB028628 AF279306 CU679835 CR457347	275296	+	NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like##NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	0.418053	CTCF.p2:10:0.290
chr15	48377364	48377486	reg1009618.p1	11.087	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	-366740	+	TSC_hg19_v1_chr15_+_48009541 AK290032	-367837	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	-901038	+	AF348468 NM_205850 BC110836 BC113628 BC113630 BC143950 DQ665306 DQ665307 HQ258279	35779	+	AF190159 TSC_hg19_v1_chr15_-_48470320 AF106685	92904	-	TSC_hg19_v1_chr15_-_48470503 AB037762 BC152420 BC152451 BC068523 AK023133 NM_016132	93092	-	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF348468|SLC24A5|283652|solute carrier family 24, member 5##NM_205850|SLC24A5|283652|solute carrier family 24, member 5##BC113628|SLC24A5|283652|solute carrier family 24, member 5##BC113630|SLC24A5|283652|solute carrier family 24, member 5##BC143950|SLC24A5|283652|solute carrier family 24, member 5##DQ665306|SLC24A5|283652|solute carrier family 24, member 5##DQ665307|SLC24A5|283652|solute carrier family 24, member 5##HQ258279|SLC24A5|283652|solute carrier family 24, member 5##AF190159|MYEF2|50804|myelin expression factor 2##AF106685|MYEF2|50804|myelin expression factor 2##AB037762|MYEF2|50804|myelin expression factor 2##BC152420|MYEF2|50804|myelin expression factor 2##BC152451|MYEF2|50804|myelin expression factor 2##BC068523|MYEF2|50804|myelin expression factor 2##AK023133|MYEF2|50804|myelin expression factor 2##NM_016132|MYEF2|50804|myelin expression factor 2	0.994795	CTCF.p2:-5:0.995
chr2	89173733	89173841	reg1008065.p2	11.087	+	S49006 TSC_hg19_v1_chr2_-_89165772	-8075	-	BX648045 TSC_hg19_v1_chr2_+_89065391 AL137717 BC031698	-108386	+	TSC_hg19_v1_chr2_+_88991190 NM_144563 AY050633 BC015529	-182572	+	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	11303	+	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	118626	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	268802	-	BX648045|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AL137717|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##BC031698|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##NM_144563|RPIA|22934|ribose 5-phosphate isomerase A##AY050633|RPIA|22934|ribose 5-phosphate isomerase A##BC015529|RPIA|22934|ribose 5-phosphate isomerase A##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus	0.991318	CTCF.p2:-3:0.991
chr5	1645138	1645244	reg1009399.p1	11.087	+	TSC_hg19_v1_chr5_-_1634100 BC019918 BC045555 AK311210 AK311251	-11073	-	TSC_hg19_v1_chr5_-_1634097 BC020552 BC053586 BC044220 AK308990 AK315872 BC067863 BC014604 AK307076	-11122	-	TSC_hg19_v1_chr5_-_1594617 BC150558	-50560	-	TSC_hg19_v1_chr5_-_1799926 AB049654 AF151109 AF155653 BC020642	154732	-	TSC_hg19_v1_chr5_-_1799952 AK312001 BC104652 EF036487 NM_032479	154781	-	TSC_hg19_v1_chr5_+_1801520 NM_004553 AK022503 BC038664 AF044959 BC046155 CR456880 HQ257915	156321	+	BC019918|LOC728613|728613|programmed cell death 6 pseudogene##BC045555|LOC728613|728613|programmed cell death 6 pseudogene##AK311210|LOC728613|728613|programmed cell death 6 pseudogene##BC020552|LOC728613|728613|programmed cell death 6 pseudogene##BC053586|LOC728613|728613|programmed cell death 6 pseudogene##BC044220|LOC728613|728613|programmed cell death 6 pseudogene##AK308990|LOC728613|728613|programmed cell death 6 pseudogene##BC067863|LOC728613|728613|programmed cell death 6 pseudogene##BC014604|LOC728613|728613|programmed cell death 6 pseudogene##AK307076|LOC728613|728613|programmed cell death 6 pseudogene##BC150558|SDHAP3|728609|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3##AB049654|MRPL36|64979|mitochondrial ribosomal protein L36##AF151109|MRPL36|64979|mitochondrial ribosomal protein L36##AF155653|MRPL36|64979|mitochondrial ribosomal protein L36##BC020642|MRPL36|64979|mitochondrial ribosomal protein L36##AK312001|MRPL36|64979|mitochondrial ribosomal protein L36##BC104652|MRPL36|64979|mitochondrial ribosomal protein L36##EF036487|MRPL36|64979|mitochondrial ribosomal protein L36##NM_032479|MRPL36|64979|mitochondrial ribosomal protein L36##NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	0.216107	CTCF.p2:-11:0.216
chr8	105430384	105430488	reg1007439.p2	11.087	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	-78384	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	-598861	+	AK126939 NM_001100117	-917461	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	48779	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	170739	-	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	170811	-	AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12	0.013751	
chr11	65473862	65473987	reg1008051.p1	11.086	+	TSC_hg19_v1_chr11_-_65430567 U88316	-43367	-	TSC_hg19_v1_chr11_-_65430427 NM_001145138 NM_001243984 NM_001243985 NM_021975	-43483	-	TSC_hg19_v1_chr11_-_65430388 BC033522 BC011603 BC110830 BC014095 M62399 BC069248 AK308020 AK308478 AK303262	-43610	-	NM_001206833 NM_006388 NM_182709 NM_182710 AK313297 U74667 AK225100 AK226002	5573	+	BC117167 BC143290 BC143296 BC093032 TSC_hg19_v1_chr11_+_65479722 AK304664 BC064912 U67734 AB463743 HQ258620 BC013211 BC000166 U40989	5851	+	TSC_hg19_v1_chr11_-_65487976 L08647	14045	-	NM_001145138|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##NM_001243984|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##NM_001243985|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##NM_021975|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##BC033522|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##BC011603|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##BC110830|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##BC014095|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##M62399|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##BC069248|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##AK308020|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##AK308478|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##AK303262|RELA|5970|v-rel reticuloendotheliosis viral oncogene homolog A (avian)##NM_001206833|KAT5|10524|K(lysine) acetyltransferase 5##NM_006388|KAT5|10524|K(lysine) acetyltransferase 5##NM_182709|KAT5|10524|K(lysine) acetyltransferase 5##NM_182710|KAT5|10524|K(lysine) acetyltransferase 5##AK313297|KAT5|10524|K(lysine) acetyltransferase 5##U74667|KAT5|10524|K(lysine) acetyltransferase 5##AK225100|KAT5|10524|K(lysine) acetyltransferase 5##AK226002|KAT5|10524|K(lysine) acetyltransferase 5##BC117167|KAT5|10524|K(lysine) acetyltransferase 5##BC143290|KAT5|10524|K(lysine) acetyltransferase 5##BC143296|KAT5|10524|K(lysine) acetyltransferase 5##BC093032|KAT5|10524|K(lysine) acetyltransferase 5##AK304664|KAT5|10524|K(lysine) acetyltransferase 5##BC064912|KAT5|10524|K(lysine) acetyltransferase 5##U67734|KAT5|10524|K(lysine) acetyltransferase 5##HQ258620|KAT5|10524|K(lysine) acetyltransferase 5##BC013211|KAT5|10524|K(lysine) acetyltransferase 5##BC000166|KAT5|10524|K(lysine) acetyltransferase 5##U40989|KAT5|10524|K(lysine) acetyltransferase 5##L08647|RNASEH2C|84153|ribonuclease H2, subunit C	0.830069	CTCF.p2:-37:0.830
chr17	15901916	15902019	reg1008005.p2	11.086	+	TSC_hg19_v1_chr17_+_15848443 M97759 BC025722 AB464451 DQ891714 DQ894891 CU693036 AY136748	-53475	+	NM_000676 X68487	-53737	+	NM_178571 AK292544 AK315847 BC028414 BC047400	-266374	+	BC105128 BC112107 NM_017775 TSC_hg19_v1_chr17_+_15902780 AK056878	798	+	DQ530600 AB464424 TSC_hg19_v1_chr17_-_15902988 BC094855 BC018807 BC044842 BC089386 BC066344 NM_001042697 NM_001042698	1002	-	TSC_hg19_v1_chr17_+_15903137 AK055780 AK297783 BC073796 BC011698	1190	+	M97759|ADORA2B|136|adenosine A2b receptor##BC025722|ADORA2B|136|adenosine A2b receptor##DQ891714|ADORA2B|136|adenosine A2b receptor##DQ894891|ADORA2B|136|adenosine A2b receptor##AY136748|ADORA2B|136|adenosine A2b receptor##NM_000676|ADORA2B|136|adenosine A2b receptor##X68487|ADORA2B|136|adenosine A2b receptor##NM_178571|TBC1D26|353149|TBC1 domain family, member 26##AK292544|TBC1D28|254272|TBC1 domain family, member 28##AK315847|TBC1D26|353149|TBC1 domain family, member 26##BC028414|TBC1D26|353149|TBC1 domain family, member 26##BC047400|TBC1D26|353149|TBC1 domain family, member 26##BC105128|TTC19|54902|tetratricopeptide repeat domain 19##BC112107|TTC19|54902|tetratricopeptide repeat domain 19##NM_017775|TTC19|54902|tetratricopeptide repeat domain 19##AK056878|TTC19|54902|tetratricopeptide repeat domain 19##DQ530600|ZSWIM7|125150|zinc finger, SWIM-type containing 7##BC094855|ZSWIM7|125150|zinc finger, SWIM-type containing 7##BC018807|ZSWIM7|125150|zinc finger, SWIM-type containing 7##BC044842|ZSWIM7|125150|zinc finger, SWIM-type containing 7##BC089386|ZSWIM7|125150|zinc finger, SWIM-type containing 7##BC066344|ZSWIM7|125150|zinc finger, SWIM-type containing 7##NM_001042697|ZSWIM7|125150|zinc finger, SWIM-type containing 7##NM_001042698|ZSWIM7|125150|zinc finger, SWIM-type containing 7##AK055780|TTC19|54902|tetratricopeptide repeat domain 19##AK297783|TTC19|54902|tetratricopeptide repeat domain 19##BC073796|TTC19|54902|tetratricopeptide repeat domain 19##BC011698|TTC19|54902|tetratricopeptide repeat domain 19	0.997065	CTCF.p2:12:0.997
chr11	132149211	132149319	reg1008303.p1	11.085	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-367926	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-368641	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-908796	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	663749	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	664340	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	1253049	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.394835	CTCF.p2:-4:0.395
chr11	18225444	18225564	reg1010315.p1	11.085	+	BC095509 NM_054032	-31121	+	BC067292 NM_054031	-83003	+	TSC_hg19_v1_chr11_-_18127617 AB489136 BC012010 AK123457 NM_138421	-97884	-	BC007026 AK312182 M81349 TSC_hg19_v1_chr11_-_18258350	32840	-	NM_006512 TSC_hg19_v1_chr11_-_18258385	32883	-	M26152 AK307163 BC020795 BC058008 TSC_hg19_v1_chr11_-_18270183 NM_001127380 NM_001199744 NM_030754	44689	-	BC095509|MRGPRX4|117196|MAS-related GPR, member X4##NM_054032|MRGPRX4|117196|MAS-related GPR, member X4##BC067292|MRGPRX3|117195|MAS-related GPR, member X3##NM_054031|MRGPRX3|117195|MAS-related GPR, member X3##AB489136|SAAL1|113174|serum amyloid A-like 1##BC012010|SAAL1|113174|serum amyloid A-like 1##AK123457|SAAL1|113174|serum amyloid A-like 1##NM_138421|SAAL1|113174|serum amyloid A-like 1##BC007026|SAA4|6291|serum amyloid A4, constitutive##AK312182|SAA4|6291|serum amyloid A4, constitutive##M81349|SAA4|6291|serum amyloid A4, constitutive##NM_006512|SAA4|6291|serum amyloid A4, constitutive##M26152|SAA2|6289|serum amyloid A2##AK307163|SAA2|6289|serum amyloid A2##BC020795|SAA2|6289|serum amyloid A2##BC058008|SAA2|6289|serum amyloid A2##NM_001127380|SAA2|6289|serum amyloid A2##NM_001199744|SAA2-SAA4|100528017|SAA2-SAA4 readthrough##NM_030754|SAA2|6289|serum amyloid A2	0.215549	CTCF.p2:9:0.216
chr15	85874458	85874580	reg1008087.p1	11.084	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-208201	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-349193	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-349282	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	49372	+	AF127481 NM_144767	345748	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	463578	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	0.0	
chr4	40982485	40982606	reg1008665.p1	11.084	+	BC088372 TSC_hg19_v1_chr4_-_40936716	-45867	-	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-123370	-	BC042401 NM_024677 BC036568 AK024063	-230599	+	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	234024	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	276351	+	TSC_hg19_v1_chr4_+_41258913 BC000332 BC018838	276373	+	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.907203	CTCF.p2:-16:0.907
chr6	1596604	1596738	reg1008725.p1	11.084	+	NM_001452 U13220 AB463646	-206546	+	BC053850 NM_033260	-283997	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-903581	-	BC134421 NM_001453	14009	+	TSC_hg19_v1_chr6_+_1611545 BC169307	14903	+	AF040260 NM_001253846	579553	-	NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##BC169307|FOXC1|2296|forkhead box C1##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase	0.997266	CTCF.p2:-1:0.997
chr20	49435035	49435174	reg1008116.p2	11.083	+	AF361220 NM_001010974 NM_017843 NM_198799 TSC_hg19_v1_chr20_+_49411542 AK000502 BC038381 BC047337 AJ511266 BC056883	-23586	+	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	-87035	+	TSC_hg19_v1_chr20_-_49308074 AK124347	-127027	-	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	112619	-	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	139959	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	140264	+	AF361220|BCAS4|55653|breast carcinoma amplified sequence 4##NM_001010974|BCAS4|55653|breast carcinoma amplified sequence 4##NM_017843|BCAS4|55653|breast carcinoma amplified sequence 4##NM_198799|BCAS4|55653|breast carcinoma amplified sequence 4##AK000502|BCAS4|55653|breast carcinoma amplified sequence 4##BC038381|BCAS4|55653|breast carcinoma amplified sequence 4##BC047337|BCAS4|55653|breast carcinoma amplified sequence 4##AJ511266|BCAS4|55653|breast carcinoma amplified sequence 4##BC056883|BCAS4|55653|breast carcinoma amplified sequence 4##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3	0.99737	CTCF.p2:-3:0.997
chr10	86687499	86687627	reg1009798.p1	11.082	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-502868	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-555945	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-599169	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	1438700	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	1593931	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	1593967	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.038098	
chr12	108154941	108155119	reg1008539.p2	11.082	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-29	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	-120	-	AK056378 TSC_hg19_v1_chr12_-_108154899	-191	-	AY238895 NM_203436	13131	+	BC110330 AB018332 NM_014653	368457	+	NM_001142345	559408	-	BC068562|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4##AK056378|PRDM4|11108|PR domain containing 4##AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##NM_001142345|CMKLR1|1240|chemokine-like receptor 1	0.0	
chr4	120207670	120207813	reg1011402.p1	11.082	+	TSC_hg19_v1_chr4_+_120133867 BC062741 NM_019050 CR749490	-73901	+	TSC_hg19_v1_chr4_+_120133742 BX648836	-73998	+	NM_016599 AJ252149 AK313856 AY013295 BC017402 BC020932 BC005195	-150739	+	TSC_hg19_v1_chr4_-_120221773 AK025703 AF075061 BC017399 NM_001001701	14093	-	AY605045 NM_001170330	17858	-	CU686944 AK025079 BC069617 BC069466 BC069625 BC069637 BC111791 NM_000134	35545	-	BC062741|USP53|54532|ubiquitin specific peptidase 53##NM_019050|USP53|54532|ubiquitin specific peptidase 53##CR749490|USP53|54532|ubiquitin specific peptidase 53##NM_016599|MYOZ2|51778|myozenin 2##AJ252149|MYOZ2|51778|myozenin 2##AK313856|MYOZ2|51778|myozenin 2##AY013295|MYOZ2|51778|myozenin 2##BC017402|MYOZ2|51778|myozenin 2##BC020932|MYOZ2|51778|myozenin 2##BC005195|MYOZ2|51778|myozenin 2##AK025703|C4orf3|401152|chromosome 4 open reading frame 3##AF075061|C4orf3|401152|chromosome 4 open reading frame 3##BC017399|C4orf3|401152|chromosome 4 open reading frame 3##NM_001001701|C4orf3|401152|chromosome 4 open reading frame 3##AY605045|C4orf3|401152|chromosome 4 open reading frame 3##NM_001170330|C4orf3|401152|chromosome 4 open reading frame 3##AK025079|FABP2|2169|fatty acid binding protein 2, intestinal##BC069617|FABP2|2169|fatty acid binding protein 2, intestinal##BC069466|FABP2|2169|fatty acid binding protein 2, intestinal##BC069625|FABP2|2169|fatty acid binding protein 2, intestinal##BC069637|FABP2|2169|fatty acid binding protein 2, intestinal##BC111791|FABP2|2169|fatty acid binding protein 2, intestinal##NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal	0.500234	CTCF.p2:2:0.500
chr4	175795229	175795366	reg1008866.p2	11.082	+	U93917 BC036086 NM_001042543 NM_006529	-44877	-	AK300524 NM_000860 NM_001145816	-351506	-	U63296 X82460 BC007691 BC018986 J05594 L76465 AK058013 AK300940 AK314624 AK300125 TSC_hg19_v1_chr4_-_175443639	-351677	-	NM_001130703 NM_001130704 NM_001130705 NM_014269 AK292410 BC036070	44236	+	CU692222 CU692662 DQ892372 DQ895581 TSC_hg19_v1_chr4_-_176733403	938096	-	BC010461 BC022508 TSC_hg19_v1_chr4_-_176733419 D49958	938144	-	U93917|GLRA3|8001|glycine receptor, alpha 3##BC036086|GLRA3|8001|glycine receptor, alpha 3##NM_001042543|GLRA3|8001|glycine receptor, alpha 3##NM_006529|GLRA3|8001|glycine receptor, alpha 3##AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##U63296|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##X82460|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC007691|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC018986|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##J05594|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##L76465|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK058013|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300940|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK314624|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300125|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29##NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29##AK292410|ADAM29|11086|ADAM metallopeptidase domain 29##BC036070|ADAM29|11086|ADAM metallopeptidase domain 29##DQ892372|GPM6A|2823|glycoprotein M6A##DQ895581|GPM6A|2823|glycoprotein M6A##BC010461|GPM6A|2823|glycoprotein M6A##BC022508|GPM6A|2823|glycoprotein M6A##D49958|GPM6A|2823|glycoprotein M6A	0.135623	
chr9	135450539	135450650	reg1007950.p1	11.082	+	AK128819 NM_207417 BC118593 BC124555	-164982	+	TSC_hg19_v1_chr9_-_135282210 BC050734 X83973 BC143821 BC127669 BC127670 BC143048 BC143049 BC062692 BC104639 AK225119 AK302902 NM_001205296 NM_007344	-168393	-	TSC_hg19_v1_chr9_-_135230374 BX538166 NM_015046	-220187	-	TSC_hg19_v1_chr9_+_135457992 AK054797 NM_020064 BC136956 BC136969 BC144433 AF325688 AB463426 AF321618	7485	+	TSC_hg19_v1_chr9_-_135545374 AK225121 AK027002 AK225350 AK304715 BC012726	94786	-	TSC_hg19_v1_chr9_+_135545447 BC060821	94824	+	AK128819|C9orf171|389799|chromosome 9 open reading frame 171##NM_207417|C9orf171|389799|chromosome 9 open reading frame 171##BC118593|C9orf171|389799|chromosome 9 open reading frame 171##BC124555|C9orf171|389799|chromosome 9 open reading frame 171##BC050734|TTF1|7270|transcription termination factor, RNA polymerase I##BC143821|TTF1|7270|transcription termination factor, RNA polymerase I##BC127669|TTF1|7270|transcription termination factor, RNA polymerase I##BC127670|TTF1|7270|transcription termination factor, RNA polymerase I##BC143048|TTF1|7270|transcription termination factor, RNA polymerase I##BC143049|TTF1|7270|transcription termination factor, RNA polymerase I##BC062692|TTF1|7270|transcription termination factor, RNA polymerase I##BC104639|TTF1|7270|transcription termination factor, RNA polymerase I##AK225119|TTF1|7270|transcription termination factor, RNA polymerase I##AK302902|TTF1|7270|transcription termination factor, RNA polymerase I##NM_001205296|TTF1|7270|transcription termination factor, RNA polymerase I##NM_007344|TTF1|7270|transcription termination factor, RNA polymerase I##BX538166|SETX|23064|senataxin##NM_015046|SETX|23064|senataxin##AK054797|BARHL1|56751|BarH-like homeobox 1##NM_020064|BARHL1|56751|BarH-like homeobox 1##BC136956|BARHL1|56751|BarH-like homeobox 1##BC136969|BARHL1|56751|BarH-like homeobox 1##BC144433|BARHL1|56751|BarH-like homeobox 1##AF325688|BARHL1|56751|BarH-like homeobox 1##AF321618|BARHL1|56751|BarH-like homeobox 1##AK225121|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK027002|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK225350|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK304715|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC012726|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC060821|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa	1.0174	CTCF.p2:20:1.000
chr16	29721773	29721907	reg1010295.p1	11.079	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-31358	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-31446	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-46826	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	35461	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	67746	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	80211	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.456673	CTCF.p2:3:0.457
chr1	9048233	9048334	reg1007751.p1	11.079	+	NM_001215 AK300652 BC034350 M57892 AB102863 AB103091	-42350	+	AK309177 NM_001428	-109133	-	TSC_hg19_v1_chr1_-_8938746 AK223192 BX537400 AK309291 AK315417	-109521	-	AB527336 AY571960 NM_207420	38120	-	TSC_hg19_v1_chr1_-_9117554 AF451839 AF479408	69295	-	TSC_hg19_v1_chr1_-_9129605 DQ892291 DQ895491 CU674838 AK300091	81316	-	NM_001215|CA6|765|carbonic anhydrase VI##AK300652|CA6|765|carbonic anhydrase VI##BC034350|CA6|765|carbonic anhydrase VI##M57892|CA6|765|carbonic anhydrase VI##AB102863|CA6|765|carbonic anhydrase VI##AB103091|CA6|765|carbonic anhydrase VI##AK309177|ENO1|2023|enolase 1, (alpha)##NM_001428|ENO1|2023|enolase 1, (alpha)##AK223192|ENO1|2023|enolase 1, (alpha)##BX537400|ENO1|2023|enolase 1, (alpha)##AK309291|ENO1|2023|enolase 1, (alpha)##AK315417|ENO1|2023|enolase 1, (alpha)##AY571960|SLC2A7|155184|solute carrier family 2 (facilitated glucose transporter), member 7##NM_207420|SLC2A7|155184|solute carrier family 2 (facilitated glucose transporter), member 7##AF451839|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AF479408|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892291|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ895491|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK300091|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5	0.953255	CTCF.p2:2:0.953
chr16	2190728	2190833	reg1009125.p1	11.078	+	U24497 TSC_hg19_v1_chr16_-_2185898 L33243 NM_000296 NM_001009944	-4881	-	AB209025 TSC_hg19_v1_chr16_-_2159898	-30902	-	TSC_hg19_v1_chr16_+_2128185 AK125096	-62568	+	TSC_hg19_v1_chr16_+_2198609 AY646153 BC066913 NM_014353	7848	+	TSC_hg19_v1_chr16_+_2198707 BC007681	7965	+	TSC_hg19_v1_chr16_+_2205783 AK090624 AX746540 NM_032271	15001	+	U24497|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##L33243|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##NM_000296|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##NM_001009944|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##AB209025|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##AK125096|TSC2|7249|tuberous sclerosis 2##AY646153|RAB26|25837|RAB26, member RAS oncogene family##BC066913|RAB26|25837|RAB26, member RAS oncogene family##NM_014353|RAB26|25837|RAB26, member RAS oncogene family##BC007681|RAB26|25837|RAB26, member RAS oncogene family##AK090624|TRAF7|84231|TNF receptor-associated factor 7##NM_032271|TRAF7|84231|TNF receptor-associated factor 7	0.980477	CTCF.p2:-10:0.980
chr9	36023571	36023683	reg1009285.p1	11.078	+	HQ258184 BC104869 BC113651 NM_019897	-65505	-	AY358408 NM_001039792	-117439	+	AY726589 NM_001004487 BC136715 BC136716	-153239	-	TSC_hg19_v1_chr9_+_36036901 AK292653 NM_021111 AK315073 BC050306 BC032240 BC060806 BC137093 CU687432	13320	+	TSC_hg19_v1_chr9_+_36136731 AK074488 BC017918 AK075091 AK298741 AK307243 CR749781 AY039756 NM_022343	113105	+	AK313763 NM_005893 AF333334 BC019251 DQ890826 DQ893980 DQ893982 EU176505 Z46967	145819	+	HQ258184|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC104869|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC113651|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##NM_019897|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##AY358408|HRCT1|646962|histidine rich carboxyl terminus 1##NM_001039792|HRCT1|646962|histidine rich carboxyl terminus 1##AY726589|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##NM_001004487|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136715|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136716|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK074488|GLIPR2|152007|GLI pathogenesis-related 2##BC017918|GLIPR2|152007|GLI pathogenesis-related 2##AK075091|GLIPR2|152007|GLI pathogenesis-related 2##AK298741|GLIPR2|152007|GLI pathogenesis-related 2##AK307243|GLIPR2|152007|GLI pathogenesis-related 2##CR749781|GLIPR2|152007|GLI pathogenesis-related 2##AY039756|GLIPR2|152007|GLI pathogenesis-related 2##NM_022343|GLIPR2|152007|GLI pathogenesis-related 2##AK313763|CCIN|881|calicin##NM_005893|CCIN|881|calicin##AF333334|CCIN|881|calicin##BC019251|CCIN|881|calicin##DQ890826|CCIN|881|calicin##DQ893980|CCIN|881|calicin##DQ893982|CCIN|881|calicin##EU176505|CCIN|881|calicin##Z46967|CCIN|881|calicin	0.984299	CTCF.p2:-7:0.984
chr11	72296864	72296977	reg1008208.p1	11.077	+	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	-151270	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	-151344	-	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	-151465	-	TSC_hg19_v1_chr11_-_72353458 AY495089 AK131525 AK092278 AX747449 NM_001143839 NM_001243784	56559	-	AY495087 NM_001146209	83187	-	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	88533	-	AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK131525|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK092278|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001143839|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001243784|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	0.962026	CTCF.p2:-7:0.962
chr13	111596785	111596890	reg1008267.p1	11.077	+	AK000100 NM_017664 TSC_hg19_v1_chr13_-_111567417	-29421	-	TSC_hg19_v1_chr13_-_111567375 BC001727 AK096083 BC039715	-29472	-	CU674848 CU691752 TSC_hg19_v1_chr13_-_111567293	-29550	-	TSC_hg19_v1_chr13_+_111767658 BC060776 NM_001113511 NM_001113512 NM_145735 BC033905 AL834228 CU687414 CU689800 EU832819 GQ129214	170892	+	AK300157 TSC_hg19_v1_chr13_+_111806035	209199	+	TSC_hg19_v1_chr13_+_111806041 AB177849 NM_003899	209214	+	AK000100|ANKRD10|55608|ankyrin repeat domain 10##NM_017664|ANKRD10|55608|ankyrin repeat domain 10##BC001727|ANKRD10|55608|ankyrin repeat domain 10##AK096083|ANKRD10|55608|ankyrin repeat domain 10##BC039715|ANKRD10|55608|ankyrin repeat domain 10##BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK300157|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AB177849|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_003899|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	0.278022	CTCF.p2:-6:0.278
chr2	171672361	171672474	reg1008599.p2	11.077	+	TSC_hg19_v1_chr2_+_171572707 BC069026	-99707	+	TSC_hg19_v1_chr2_+_171571942 AB464708	-100440	+	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	-100559	+	M81883 NM_000817 NM_013445 BC037780 TSC_hg19_v1_chr2_+_171673241	742	+	TSC_hg19_v1_chr2_+_171673396 AK292582 BC026349 BC002815 S61898 L16888 Z22750	995	+	NM_001201428 AL117430 AK125761 NM_015530	112574	+	BC069026|SP5|389058|Sp5 transcription factor##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##M81883|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_000817|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_013445|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC037780|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##AK292582|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC026349|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC002815|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##S61898|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##L16888|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##Z22750|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_001201428|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AL117430|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK125761|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##NM_015530|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa	0.999552	CTCF.p2:1:1.000
chrX	106916231	106916355	reg1010269.p1	11.077	+	AK307748 AK312706 AK316467 TSC_hg19_v1_chrX_+_106871744 AK297968 BC001605 X15331 AK223169 DQ895833 EU176362 AB464022 CU674782	-44495	+	NM_001204402 NM_002764 TSC_hg19_v1_chrX_+_106871719 D00860	-44598	+	BC033510 NM_001169154 NM_173494	-466432	+	BC018148 Z50781 NM_001015881	43360	-	CR533450 EU831656 EU831739 TSC_hg19_v1_chrX_-_106960193 AK311834 AY007119 AK127938	43836	-	AF153603 AF228339 AB025432 AF183393 BC072446 TSC_hg19_v1_chrX_-_106960293 AL110191 NM_004089 CR933650	43988	-	AK307748|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK312706|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK316467|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK297968|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC001605|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##X15331|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK223169|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##DQ895833|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##EU176362|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##NM_001204402|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##NM_002764|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##D00860|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC033510|CXorf41|139212|chromosome X open reading frame 41##NM_001169154|CXorf41|139212|chromosome X open reading frame 41##NM_173494|CXorf41|139212|chromosome X open reading frame 41##BC018148|TSC22D3|1831|TSC22 domain family, member 3##Z50781|TSC22D3|1831|TSC22 domain family, member 3##NM_001015881|TSC22D3|1831|TSC22 domain family, member 3##CR533450|TSC22D3|1831|TSC22 domain family, member 3##EU831656|TSC22D3|1831|TSC22 domain family, member 3##EU831739|TSC22D3|1831|TSC22 domain family, member 3##AK311834|TSC22D3|1831|TSC22 domain family, member 3##AY007119|TSC22D3|1831|TSC22 domain family, member 3##AK127938|TSC22D3|1831|TSC22 domain family, member 3##AF153603|TSC22D3|1831|TSC22 domain family, member 3##AF228339|TSC22D3|1831|TSC22 domain family, member 3##AB025432|TSC22D3|1831|TSC22 domain family, member 3##AF183393|TSC22D3|1831|TSC22 domain family, member 3##BC072446|TSC22D3|1831|TSC22 domain family, member 3##AL110191|TSC22D3|1831|TSC22 domain family, member 3##NM_004089|TSC22D3|1831|TSC22 domain family, member 3##CR933650|TSC22D3|1831|TSC22 domain family, member 3	0.230318	CTCF.p2:-8:0.230
chr15	91814916	91815044	reg1009134.p2	11.076	+	AB018278 TSC_hg19_v1_chr15_+_91769341 CR457086 DQ891614 EU176590	-45569	+	TSC_hg19_v1_chr15_+_91643558 AF052188	-171421	+	TSC_hg19_v1_chr15_+_91643505 NM_014848 BC030011	-171494	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	581963	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	582117	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	582587	+	AB018278|SV2B|9899|synaptic vesicle glycoprotein 2B##CR457086|SV2B|9899|synaptic vesicle glycoprotein 2B##DQ891614|SV2B|9899|synaptic vesicle glycoprotein 2B##EU176590|SV2B|9899|synaptic vesicle glycoprotein 2B##AF052188|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_014848|SV2B|9899|synaptic vesicle glycoprotein 2B##BC030011|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	0.999791	CTCF.p2:10:1.000
chr7	26707250	26707388	reg1006361.p1	11.076	+	AK093321 AX748054 NM_001145531	-29830	+	TSC_hg19_v1_chr7_+_26438248 AK056484	-269057	+	AK309162 NM_001199838	-303375	+	AF072166 AJ004886 AB528968 DQ892896 DQ896144 AB014486 TSC_hg19_v1_chr7_-_26904210 BC002893 AK222885 AK313209 BC036044 AF051323 NM_003930	196874	-	S79869 S79871 S79910 U37431 AB464569 CU689416 DQ890884 DQ894038 U10421 AK308067 BC032547 AK313514 NM_005522 NM_153620	428255	-	TSC_hg19_v1_chr7_+_27135786 BC031342	428466	+	AK093321|C7orf71|285941|chromosome 7 open reading frame 71##NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71##AK056484|LOC441204|441204|uncharacterized LOC441204##AK309162|SNX10|29887|sorting nexin 10##NM_001199838|SNX10|29887|sorting nexin 10##AF072166|SKAP2|8935|src kinase associated phosphoprotein 2##AJ004886|SKAP2|8935|src kinase associated phosphoprotein 2##DQ892896|SKAP2|8935|src kinase associated phosphoprotein 2##DQ896144|SKAP2|8935|src kinase associated phosphoprotein 2##AB014486|SKAP2|8935|src kinase associated phosphoprotein 2##BC002893|SKAP2|8935|src kinase associated phosphoprotein 2##AK222885|SKAP2|8935|src kinase associated phosphoprotein 2##AK313209|SKAP2|8935|src kinase associated phosphoprotein 2##BC036044|SKAP2|8935|src kinase associated phosphoprotein 2##AF051323|SKAP2|8935|src kinase associated phosphoprotein 2##NM_003930|SKAP2|8935|src kinase associated phosphoprotein 2##S79869|HOXA1|3198|homeobox A1##S79871|HOXA1|3198|homeobox A1##S79910|HOXA1|3198|homeobox A1##U37431|HOXA1|3198|homeobox A1##DQ890884|HOXA1|3198|homeobox A1##DQ894038|HOXA1|3198|homeobox A1##U10421|HOXA1|3198|homeobox A1##AK308067|HOXA1|3198|homeobox A1##BC032547|HOXA1|3198|homeobox A1##AK313514|HOXA1|3198|homeobox A1##NM_005522|HOXA1|3198|homeobox A1##NM_153620|HOXA1|3198|homeobox A1##BC031342|HOTAIRM1|100506311|HOXA transcript antisense RNA, myeloid-specific 1 (non-protein coding)	1.017212	CTCF.p2:61:0.999
chr11	27507587	27507697	reg1008301.p2	11.075	+	TSC_hg19_v1_chr11_-_27494323 AB209743 AF257182 BC033039 NM_018490	-13338	-	AF382034 TSC_hg19_v1_chr11_-_27384763 AY598334 CU678989 AK313358 BC008496 AK308494 NM_030771 NM_080654	-122876	-	NM_003986	-445134	+	AB385247 BC053907 TSC_hg19_v1_chr11_-_27528315 BC009774 AK223156 AL833601 AK002077 NM_018362	20670	-	TSC_hg19_v1_chr11_+_27528395 AY054401 AY054402 AY054404 AY513486	20747	+	EF689009 EF689010 NM_001143816 NM_170735	173553	-	AB209743|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF257182|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC033039|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##NM_018490|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF382034|CCDC34|91057|coiled-coil domain containing 34##AY598334|CCDC34|91057|coiled-coil domain containing 34##AK313358|CCDC34|91057|coiled-coil domain containing 34##BC008496|CCDC34|91057|coiled-coil domain containing 34##AK308494|CCDC34|91057|coiled-coil domain containing 34##NM_030771|CCDC34|91057|coiled-coil domain containing 34##NM_080654|CCDC34|91057|coiled-coil domain containing 34##NM_003986|BBOX1|8424|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1##BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)##BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)##AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)##AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)##AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)##NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)##AY054401|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY054402|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY054404|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY513486|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##EF689009|BDNF|627|brain-derived neurotrophic factor##EF689010|BDNF|627|brain-derived neurotrophic factor##NM_001143816|BDNF|627|brain-derived neurotrophic factor##NM_170735|BDNF|627|brain-derived neurotrophic factor	0.859169	CTCF.p2:8:0.859
chr11	92675279	92675404	reg1011034.p1	11.075	+	NM_001008781	-590080	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-2690931	+	AK290231 NM_001144073 NM_012124	-2718810	-	BC069163 NM_005959 U25341 AY521019	27498	+	TSC_hg19_v1_chr11_-_92930978 CU690400	255646	-	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	255744	-	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4	0.0	
chr1	201192127	201192252	reg1011740.p1	11.075	+	BC033185 NM_001164586	-32237	+	AK075335 AY138587 AK296307 TSC_hg19_v1_chr1_-_201123603 BC001106 AL136600 AK054883 AK303843 NM_016456	-68577	-	TSC_hg19_v1_chr1_-_201123569 AK091726	-68618	-	NM_000299 NM_001005337 Z34974 AK315291 X79293 BC114571 BC115702	60448	+	TSC_hg19_v1_chr1_-_201342319 X79855 X79856 X79858 CU678094 S64668 X74819 X79859	150191	-	TSC_hg19_v1_chr1_-_201346783 L40162 AY277394 X79861 BC002653	154599	-	BC033185|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##NM_001164586|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##AK075335|TMEM9|252839|transmembrane protein 9##AY138587|TMEM9|252839|transmembrane protein 9##AK296307|TMEM9|252839|transmembrane protein 9##BC001106|TMEM9|252839|transmembrane protein 9##AL136600|TMEM9|252839|transmembrane protein 9##AK054883|TMEM9|252839|transmembrane protein 9##AK303843|TMEM9|252839|transmembrane protein 9##NM_016456|TMEM9|252839|transmembrane protein 9##AK091726|TMEM9|252839|transmembrane protein 9##NM_000299|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##NM_001005337|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##Z34974|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##AK315291|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##X79293|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC114571|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC115702|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##X79855|TNNT2|7139|troponin T type 2 (cardiac)##X79856|TNNT2|7139|troponin T type 2 (cardiac)##X79858|TNNT2|7139|troponin T type 2 (cardiac)##S64668|TNNT2|7139|troponin T type 2 (cardiac)##X74819|TNNT2|7139|troponin T type 2 (cardiac)##X79859|TNNT2|7139|troponin T type 2 (cardiac)##L40162|TNNT2|7139|troponin T type 2 (cardiac)##AY277394|TNNT2|7139|troponin T type 2 (cardiac)##X79861|TNNT2|7139|troponin T type 2 (cardiac)##BC002653|TNNT2|7139|troponin T type 2 (cardiac)	0.136726	
chr15	20814937	20815049	reg1009276.p2	11.075	+	NM_001145004	-67880	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-103556	-	None	None	None	NM_207355 BC066981	256985	-	NM_207355 BC066981	1268145	-	BC136985 NM_001004719	1553484	+	NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2	0.998843	CTCF.p2:17:0.999
chr2	169998422	169998526	reg1008353.p1	11.075	+	AY359046 NM_001142271	-60858	+	AF529287 NM_001142270	-69428	+	TSC_hg19_v1_chr2_+_169926132 AF343729 AF240697 AF240698 BC058883	-72344	+	AY265358 AY265357 TSC_hg19_v1_chr2_-_170218991	220507	-	U33837 TSC_hg19_v1_chr2_-_170219045 AK295005 NM_004525	220605	-	TSC_hg19_v1_chr2_+_170335996 AK302851 AY604003 AY604004 NM_152384 BC044593 AL834305 AK312680 AM393220 AB528077 CU692220	337531	+	AY359046|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##NM_001142271|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AF529287|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##NM_001142270|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AF343729|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AF240697|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AF240698|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##BC058883|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AY265358|LRP2|4036|low density lipoprotein receptor-related protein 2##AY265357|LRP2|4036|low density lipoprotein receptor-related protein 2##U33837|LRP2|4036|low density lipoprotein receptor-related protein 2##AK295005|LRP2|4036|low density lipoprotein receptor-related protein 2##NM_004525|LRP2|4036|low density lipoprotein receptor-related protein 2##AY604003|BBS5|129880|Bardet-Biedl syndrome 5##AY604004|BBS5|129880|Bardet-Biedl syndrome 5##NM_152384|BBS5|129880|Bardet-Biedl syndrome 5##BC044593|BBS5|129880|Bardet-Biedl syndrome 5##AL834305|BBS5|129880|Bardet-Biedl syndrome 5##AK312680|BBS5|129880|Bardet-Biedl syndrome 5##AM393220|BBS5|129880|Bardet-Biedl syndrome 5	0.98006	CTCF.p2:-5:0.980
chr18	14178814	14178962	reg1007730.p1	11.074	+	BC010705 AK096748 BC024227 BC037787 NM_145287	-46431	-	AK315319 BC094710 NM_000529 AK289381	-263352	-	BC095531 NM_005913	-353346	+	TSC_hg19_v1_chr18_+_14179298 BC127726	421	+	BC140940 BX649118 AK307658 NM_001137671	364656	-	AF269088 NM_001145029 BC028407	569397	+	BC010705|ZNF519|162655|zinc finger protein 519##AK096748|ZNF519|162655|zinc finger protein 519##BC024227|ZNF519|162655|zinc finger protein 519##BC037787|ZNF519|162655|zinc finger protein 519##NM_145287|ZNF519|162655|zinc finger protein 519##AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC095531|MC5R|4161|melanocortin 5 receptor##NM_005913|MC5R|4161|melanocortin 5 receptor##BC127726|ANKRD20A5P|440482|ankyrin repeat domain 20 family, member A5, pseudogene##BC140940|POTEC|388468|POTE ankyrin domain family, member C##BX649118|POTEC|388468|POTE ankyrin domain family, member C##AK307658|POTEC|388468|POTE ankyrin domain family, member C##NM_001137671|POTEC|388468|POTE ankyrin domain family, member C##AF269088|ANKRD30B|374860|ankyrin repeat domain 30B##NM_001145029|ANKRD30B|374860|ankyrin repeat domain 30B##BC028407|ANKRD30B|374860|ankyrin repeat domain 30B	1.373297	CTCF.p2:23:0.362	CTCF.p2:-54:0.994
chr20	42846131	42846240	reg1008026.p1	11.074	+	BC048277 BC067866 BC094781 BC032458 BC036500 AK055067 BC019858 TSC_hg19_v1_chr20_+_42839737	-6514	+	TSC_hg19_v1_chr20_-_42839428 AF151041 AF161517 AL133000 AK000476 NM_016470	-6701	-	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	-6829	-	TSC_hg19_v1_chr20_+_42875907 AK056251 AK225166 NM_024034	29721	+	TSC_hg19_v1_chr20_+_42875913 BC000199	29732	+	AF277566 TSC_hg19_v1_chr20_+_42875947 AK299259 AK293484 AK299700 AF123764	29762	+	BC048277|LOC100505783|100505783|uncharacterized LOC100505783##BC067866|LOC100505783|100505783|uncharacterized LOC100505783##BC094781|LOC100505783|100505783|uncharacterized LOC100505783##BC032458|LOC100505783|100505783|uncharacterized LOC100505783##BC036500|LOC100505783|100505783|uncharacterized LOC100505783##AK055067|LOC100505783|100505783|uncharacterized LOC100505783##BC019858|LOC100505783|100505783|uncharacterized LOC100505783##AF151041|C20orf111|51526|chromosome 20 open reading frame 111##AF161517|C20orf111|51526|chromosome 20 open reading frame 111##AL133000|C20orf111|51526|chromosome 20 open reading frame 111##AK000476|C20orf111|51526|chromosome 20 open reading frame 111##NM_016470|C20orf111|51526|chromosome 20 open reading frame 111##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111##AK056251|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AK225166|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##NM_024034|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##BC000199|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AF277566|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AK299259|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AK293484|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AK299700|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AF123764|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1	0.989644	CTCF.p2:-14:0.990
chr2	237936203	237936321	reg1008676.p2	11.074	+	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	-457834	+	BC043504 NM_024726 AK294105 BC028699	-520130	-	NM_212556 BX647589	-763268	-	BC036499 NM_006710 NM_198189	57756	+	TSC_hg19_v1_chr2_-_237994424 AK056246	58175	-	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	58258	+	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	0.158561	
chr6	160955341	160955452	reg1008508.p2	11.074	+	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	-186002	+	CU689064 BC039899 AK290787 X98333 AB075951 BC030978 NM_003058	-275521	-	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	-412482	+	NM_005577	132010	-	NM_000301 NM_001168338 AK308036 AK312966 AK298338 X05199 M74220 BC060513	167865	+	TSC_hg19_v1_chr6_+_161412797 BC146770 D86968	457346	+	BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##BC039899|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AK290787|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##X98333|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AB075951|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC030978|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003058|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_005577|LPA|4018|lipoprotein, Lp(a)##NM_000301|PLG|5340|plasminogen##NM_001168338|PLG|5340|plasminogen##AK308036|PLG|5340|plasminogen##AK312966|PLG|5340|plasminogen##AK298338|PLG|5340|plasminogen##X05199|PLG|5340|plasminogen##M74220|PLG|5340|plasminogen##BC060513|PLG|5340|plasminogen##BC146770|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##D86968|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4	0.999049	CTCF.p2:17:0.999
chr8	124475201	124475313	reg1008329.p1	11.074	+	AK001066 NM_018024 AK225643 TSC_hg19_v1_chr8_+_124429026 AK293492 BC008781 AB528691 CU679103	-46231	+	CR749832 TSC_hg19_v1_chr8_-_124428591	-46659	-	TSC_hg19_v1_chr8_-_124408688 NM_014109	-66560	-	BC120963 BC120964 BC024030 NM_148177	69122	-	AY059629 AJ420108 TSC_hg19_v1_chr8_-_124553447 AK056986 EF143260	78093	-	TSC_hg19_v1_chr8_-_124553499 NM_001242463 NM_058229	78224	-	AK001066|WDYHV1|55093|WDYHV motif containing 1##NM_018024|WDYHV1|55093|WDYHV motif containing 1##AK225643|WDYHV1|55093|WDYHV motif containing 1##AK293492|WDYHV1|55093|WDYHV motif containing 1##BC008781|WDYHV1|55093|WDYHV motif containing 1##CR749832|ATAD2|29028|ATPase family, AAA domain containing 2##NM_014109|ATAD2|29028|ATPase family, AAA domain containing 2##BC120963|FBXO32|114907|F-box protein 32##BC120964|FBXO32|114907|F-box protein 32##BC024030|FBXO32|114907|F-box protein 32##NM_148177|FBXO32|114907|F-box protein 32##AY059629|FBXO32|114907|F-box protein 32##AJ420108|FBXO32|114907|F-box protein 32##AK056986|FBXO32|114907|F-box protein 32##EF143260|FBXO32|114907|F-box protein 32##NM_001242463|FBXO32|114907|F-box protein 32##NM_058229|FBXO32|114907|F-box protein 32	0.070002	
chr3	39333462	39333605	reg1010804.p1	11.073	+	TSC_hg19_v1_chr3_-_39323217 AB464486 NM_001171174	-10326	-	NM_001171171	-10770	-	NM_001171172	-11604	-	AK314957 NM_005201 AF005210 BC107152 BC107159 D49919 BC074743	37712	+	TSC_hg19_v1_chr3_+_39424860 NM_017875 AK000558 AK225388 BC013194 CR457242	91457	+	BC070263 NM_002295 TSC_hg19_v1_chr3_+_39448210 BC066941 BC107567 BC005391 BC062714 D28372 AF503367 BC013827 BC050688 X15005 BC034537 BC053370 BC071968 BC010418 BC071693 BC018867 BC071969 BC073863	114677	+	NM_001171174|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171171|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171172|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK314957|CCR8|1237|chemokine (C-C motif) receptor 8##NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8##AF005210|CCR8|1237|chemokine (C-C motif) receptor 8##BC107152|CCR8|1237|chemokine (C-C motif) receptor 8##BC107159|CCR8|1237|chemokine (C-C motif) receptor 8##D49919|CCR8|1237|chemokine (C-C motif) receptor 8##BC074743|CCR8|1237|chemokine (C-C motif) receptor 8##NM_017875|SLC25A38|54977|solute carrier family 25, member 38##AK000558|SLC25A38|54977|solute carrier family 25, member 38##AK225388|SLC25A38|54977|solute carrier family 25, member 38##BC013194|SLC25A38|54977|solute carrier family 25, member 38##CR457242|SLC25A38|54977|solute carrier family 25, member 38##BC070263|RPSA|3921|ribosomal protein SA##NM_002295|RPSA|3921|ribosomal protein SA##BC066941|RPSA|3921|ribosomal protein SA##BC107567|RPSA|3921|ribosomal protein SA##BC005391|RPSA|3921|ribosomal protein SA##BC062714|RPSA|3921|ribosomal protein SA##AF503367|RPSA|3921|ribosomal protein SA##BC013827|RPSA|3921|ribosomal protein SA##BC050688|RPSA|3921|ribosomal protein SA##X15005|RPSA|3921|ribosomal protein SA##BC034537|RPSA|3921|ribosomal protein SA##BC053370|RPSA|3921|ribosomal protein SA##BC071968|RPSA|3921|ribosomal protein SA##BC010418|RPSA|3921|ribosomal protein SA##BC071693|RPSA|3921|ribosomal protein SA##BC018867|RPSA|3921|ribosomal protein SA##BC071969|RPSA|3921|ribosomal protein SA##BC073863|RPSA|3921|ribosomal protein SA	0.998832	CTCF.p2:-9:0.999
chrX	48774609	48774756	reg1006835.p2	11.073	+	D84454 NM_001042498	-5448	-	CR450287 D88146 NM_005660 AK225508 AK290284 AK293415 AK293419 AK298484 AK299748 TSC_hg19_v1_chrX_-_48768926 BC035747 NM_001032289 AK292816	-5751	-	NM_001167992 AJ973593 AJ973594 AJ973595 AJ973596 AJ973597 AJ973598 AJ973599 AJ973600 AJ973602 AJ973603 AJ973604 AJ973605 AJ973606 AJ973607 AJ973601 AB041833 AB041834 AB041835 AB041836 AB385557 CU680304 DQ892221 DQ894883	-18899	+	U77735 BC018111 AK312745 TSC_hg19_v1_chrX_-_48776302 AK290931 NM_006875	1665	-	TSC_hg19_v1_chrX_-_48814831 BC028225	40123	-	TSC_hg19_v1_chrX_-_48814870 BC009917 NM_001136157 NM_001136158 NM_017602	40192	-	D84454|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001042498|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##CR450287|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##D88146|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_005660|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK225508|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK290284|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293415|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293419|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK298484|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK299748|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC035747|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001032289|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK292816|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001167992|PQBP1|10084|polyglutamine binding protein 1##AJ973593|PQBP1|10084|polyglutamine binding protein 1##AJ973594|PQBP1|10084|polyglutamine binding protein 1##AJ973595|PQBP1|10084|polyglutamine binding protein 1##AJ973596|PQBP1|10084|polyglutamine binding protein 1##AJ973597|PQBP1|10084|polyglutamine binding protein 1##AJ973598|PQBP1|10084|polyglutamine binding protein 1##AJ973599|PQBP1|10084|polyglutamine binding protein 1##AJ973600|PQBP1|10084|polyglutamine binding protein 1##AJ973602|PQBP1|10084|polyglutamine binding protein 1##AJ973603|PQBP1|10084|polyglutamine binding protein 1##AJ973604|PQBP1|10084|polyglutamine binding protein 1##AJ973605|PQBP1|10084|polyglutamine binding protein 1##AJ973606|PQBP1|10084|polyglutamine binding protein 1##AJ973607|PQBP1|10084|polyglutamine binding protein 1##AJ973601|PQBP1|10084|polyglutamine binding protein 1##AB041833|PQBP1|10084|polyglutamine binding protein 1##AB041834|PQBP1|10084|polyglutamine binding protein 1##AB041835|PQBP1|10084|polyglutamine binding protein 1##AB041836|PQBP1|10084|polyglutamine binding protein 1##DQ892221|PQBP1|10084|polyglutamine binding protein 1##DQ894883|PQBP1|10084|polyglutamine binding protein 1##U77735|PIM2|11040|pim-2 oncogene##BC018111|PIM2|11040|pim-2 oncogene##AK312745|PIM2|11040|pim-2 oncogene##AK290931|PIM2|11040|pim-2 oncogene##NM_006875|PIM2|11040|pim-2 oncogene##BC028225|OTUD5|55593|OTU domain containing 5##BC009917|OTUD5|55593|OTU domain containing 5##NM_001136157|OTUD5|55593|OTU domain containing 5##NM_001136158|OTUD5|55593|OTU domain containing 5##NM_017602|OTUD5|55593|OTU domain containing 5	0.963245	CTCF.p2:0:0.963
chr6	52264688	52264820	reg1010038.p1	11.072	+	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	-37797	+	TSC_hg19_v1_chr6_-_52149551 D38073 AK299566 NM_002388 AK301704	-115175	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	-115234	-	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	20324	+	AK297632 NM_001172420	21050	+	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	177004	-	NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##D38073|MCM3|4172|minichromosome maintenance complex component 3##AK299566|MCM3|4172|minichromosome maintenance complex component 3##NM_002388|MCM3|4172|minichromosome maintenance complex component 3##AK301704|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3##NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2	0.705467	CTCF.p2:17:0.705
chr1	205304861	205304981	reg1007073.p2	11.071	+	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	-14078	-	AY358192 TSC_hg19_v1_chr1_+_205236667	-68287	+	AK293734 NM_001242925	-106863	+	BC036076 TSC_hg19_v1_chr1_-_205313311	8389	-	AK299227 AK001610 NM_018203 AK096590	21119	-	AB084764 AB084765 AB085610 AB096677 AB096678 AB096679 AB096680 AB096681 AB096682 BC036636 AK302392 NM_001001552 NM_001199050 NM_001199051 NM_001199052	86275	-	AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK293734|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_001242925|TMCC2|9911|transmembrane and coiled-coil domain family 2##BC036076|KLHDC8A|55220|kelch domain containing 8A##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A##AB084764|LEMD1|93273|LEM domain containing 1##AB084765|LEMD1|93273|LEM domain containing 1##AB085610|LEMD1|93273|LEM domain containing 1##AB096677|LEMD1|93273|LEM domain containing 1##AB096678|LEMD1|93273|LEM domain containing 1##AB096679|LEMD1|93273|LEM domain containing 1##AB096680|LEMD1|93273|LEM domain containing 1##AB096681|LEMD1|93273|LEM domain containing 1##AB096682|LEMD1|93273|LEM domain containing 1##BC036636|LEMD1|93273|LEM domain containing 1##AK302392|LEMD1|93273|LEM domain containing 1##NM_001001552|LEMD1|93273|LEM domain containing 1##NM_001199050|LEMD1|93273|LEM domain containing 1##NM_001199051|LEMD1|93273|LEM domain containing 1##NM_001199052|LEMD1|93273|LEM domain containing 1	1.96344	CTCF.p2:-24:0.964	CTCF.p2:41:1.000
chrX	153029506	153029613	reg1008889.p1	11.070	+	AY421736 TSC_hg19_v1_chrX_+_152991253	-38329	+	BC025358 NM_000033 TSC_hg19_v1_chrX_+_152990337 Z21876 BC015541	-39226	+	TSC_hg19_v1_chrX_-_152989858 Z31696	-39694	-	TSC_hg19_v1_chrX_+_153029673 AK292535 NM_001163257 NM_005393 AK307894 AB033032 AF149019 AK295894 AK296538 AK304705	98	+	AK295849 TSC_hg19_v1_chrX_+_153030956 AK295762	1402	+	TSC_hg19_v1_chrX_+_153046495 NM_001170760 NM_001170761 NM_014370 BC117124 AK301749 AK314828 BC092416 AF027406 AB489184 DQ099381 U82808	16937	+	AY421736|ABCD1|215|ATP-binding cassette, sub-family D (ALD), member 1##BC025358|ABCD1|215|ATP-binding cassette, sub-family D (ALD), member 1##NM_000033|ABCD1|215|ATP-binding cassette, sub-family D (ALD), member 1##Z21876|ABCD1|215|ATP-binding cassette, sub-family D (ALD), member 1##BC015541|ABCD1|215|ATP-binding cassette, sub-family D (ALD), member 1##Z31696|BCAP31|10134|B-cell receptor-associated protein 31##AK292535|PLXNB3|5365|plexin B3##NM_001163257|PLXNB3|5365|plexin B3##NM_005393|PLXNB3|5365|plexin B3##AK307894|PLXNB3|5365|plexin B3##AB033032|PLXNB3|5365|plexin B3##AF149019|PLXNB3|5365|plexin B3##AK295894|PLXNB3|5365|plexin B3##AK296538|PLXNB3|5365|plexin B3##AK304705|PLXNB3|5365|plexin B3##AK295849|PLXNB3|5365|plexin B3##AK295762|PLXNB3|5365|plexin B3##NM_001170760|SRPK3|26576|SRSF protein kinase 3##NM_001170761|SRPK3|26576|SRSF protein kinase 3##NM_014370|SRPK3|26576|SRSF protein kinase 3##BC117124|SRPK3|26576|SRSF protein kinase 3##AK301749|SRPK3|26576|SRSF protein kinase 3##AK314828|SRPK3|26576|SRSF protein kinase 3##BC092416|SRPK3|26576|SRSF protein kinase 3##AF027406|SRPK3|26576|SRSF protein kinase 3##DQ099381|SRPK3|26576|SRSF protein kinase 3##U82808|SRPK3|26576|SRSF protein kinase 3	0.999913	CTCF.p2:10:1.000
chr13	30282170	30282289	reg1009556.p1	11.069	+	TSC_hg19_v1_chr13_-_30169826 NM_003045	-112409	-	X59155 X57303 TSC_hg19_v1_chr13_-_30169595 AK312818 BC063303	-112608	-	AK301633 TSC_hg19_v1_chr13_+_30070532	-211722	+	AK307361 AM393248 AM393364 CR533458 AF044221 AL080177 AK311846 TSC_hg19_v1_chr13_-_30423999	141570	-	BC059385 BC044582 TSC_hg19_v1_chr13_-_30424481	142177	-	TSC_hg19_v1_chr13_-_30424719 AK056580	142473	-	NM_003045|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK301633|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK307361|UBL3|5412|ubiquitin-like 3##AM393248|UBL3|5412|ubiquitin-like 3##AM393364|UBL3|5412|ubiquitin-like 3##CR533458|UBL3|5412|ubiquitin-like 3##AF044221|UBL3|5412|ubiquitin-like 3##AL080177|UBL3|5412|ubiquitin-like 3##AK311846|UBL3|5412|ubiquitin-like 3##BC059385|UBL3|5412|ubiquitin-like 3##BC044582|UBL3|5412|ubiquitin-like 3##AK056580|UBL3|5412|ubiquitin-like 3	0.860393	CTCF.p2:0:0.860
chr12	106620707	106620848	reg1010672.p1	11.068	+	AB011109 BC152462 NM_014840	-86967	-	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	-88095	-	AJ311378 TSC_hg19_v1_chr12_+_105724640	-896138	+	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	21070	-	TSC_hg19_v1_chr12_+_106696595 BC033617 NM_152772 BC017872 AF306671 AF306858 AK314055	75795	+	NM_018082 TSC_hg19_v1_chr12_+_106751498 BX537447	130693	+	AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AJ311378|C12orf75|387882|chromosome 12 open reading frame 75##BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4##BC033617|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_152772|TCP11L2|255394|t-complex 11 (mouse)-like 2##BC017872|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306671|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306858|TCP11L2|255394|t-complex 11 (mouse)-like 2##AK314055|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	0.97256	CTCF.p2:-18:0.973
chr20	35465203	35465348	reg1011697.p1	11.068	+	TSC_hg19_v1_chr20_-_35444558 AK131491	-20655	-	AK057056 TSC_hg19_v1_chr20_-_35407842	-57499	-	TSC_hg19_v1_chr20_-_35402167 BC035821 AK093031 AX747868 AK290738 NM_001145316 NM_024918 AK301671 AK301840 BC058899 AK023408 BC026011 NM_001145315 NM_001145317 NM_001145318	-63090	-	AK126630 NM_199181	23000	-	TSC_hg19_v1_chr20_-_35492072 NM_080627	26859	-	TSC_hg19_v1_chr20_+_35504544 BC127688 BC130646 BC130648 AK123544 NM_080628 HQ258755	39274	+	AK131491|KIAA0889|140710|KIAA0889##AK057056|KIAA0889|140710|KIAA0889##BC035821|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK093031|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK290738|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145316|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_024918|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301671|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301840|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC058899|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK023408|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC026011|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145315|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145317|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145318|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK126630|KIAA0889|140710|KIAA0889##NM_199181|KIAA0889|140710|KIAA0889##NM_080627|KIAA0889|140710|KIAA0889##BC127688|C20orf118|140711|chromosome 20 open reading frame 118##BC130646|C20orf118|140711|chromosome 20 open reading frame 118##BC130648|C20orf118|140711|chromosome 20 open reading frame 118##AK123544|C20orf118|140711|chromosome 20 open reading frame 118##NM_080628|C20orf118|140711|chromosome 20 open reading frame 118##HQ258755|C20orf118|140711|chromosome 20 open reading frame 118	0.0	
chr17	1768864	1768991	reg1010939.p1	11.067	+	TSC_hg19_v1_chr17_+_1733335 M63488 AB209732 BC018126 AB385027 HQ258560	-35578	+	TSC_hg19_v1_chr17_+_1733284 NM_002945 AK289704	-35643	+	TSC_hg19_v1_chr17_-_1733157 BC035077 AK095369 NM_052928	-35789	-	BC128608 NM_178568	159250	-	TSC_hg19_v1_chr17_+_1933446 S81752 U34880 AF321876 NM_001383 AK314015 BC096086 BC096087 BC096088 BC096089 BC003099	164494	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	176381	+	M63488|RPA1|6117|replication protein A1, 70kDa##AB209732|RPA1|6117|replication protein A1, 70kDa##BC018126|RPA1|6117|replication protein A1, 70kDa##HQ258560|RPA1|6117|replication protein A1, 70kDa##NM_002945|RPA1|6117|replication protein A1, 70kDa##AK289704|RPA1|6117|replication protein A1, 70kDa##BC035077|SMYD4|114826|SET and MYND domain containing 4##AK095369|SMYD4|114826|SET and MYND domain containing 4##NM_052928|SMYD4|114826|SET and MYND domain containing 4##BC128608|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_178568|RTN4RL1|146760|reticulon 4 receptor-like 1##S81752|DPH1|1801|DPH1 homolog (S. cerevisiae)##U34880|DPH1|1801|DPH1 homolog (S. cerevisiae)##AF321876|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_001383|DPH1|1801|DPH1 homolog (S. cerevisiae)##AK314015|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096086|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096087|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096088|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096089|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC003099|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2	0.997932	CTCF.p2:7:0.998
chr4	76215116	76215253	reg1010317.p1	11.067	+	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	-356812	+	BC011618 S55606 AB109441 NM_001729	-495401	-	BC009799 M30704 NM_001657	-734556	+	TSC_hg19_v1_chr4_-_76439504 AK309555 AK308754 AB528599 AF247041 CU689096 CU690404 GQ129342 GQ129343 GQ250944 GQ250945 GQ250946 JF691538 JF691539 AB209072 AF255666 AY888047 GU937000 AF305424	224332	-	TSC_hg19_v1_chr4_-_76439614 AK091501 AX747022 BC031057 BC047393 NM_001008925 NM_001009922 NM_015436	224430	-	NM_144721 TSC_hg19_v1_chr4_+_76439670 AK310575 AK056959 AK303658 AK308914 AK309187 AL833350 BX647579 AK313765	224507	+	NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##AK309555|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK308754|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF247041|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129342|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129343|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250944|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250945|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250946|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AB209072|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF255666|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AY888047|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GU937000|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF305424|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK091501|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC031057|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC047393|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001008925|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001009922|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_015436|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_144721|THAP6|152815|THAP domain containing 6##AK310575|THAP6|152815|THAP domain containing 6##AK056959|THAP6|152815|THAP domain containing 6##AK303658|THAP6|152815|THAP domain containing 6##AK308914|THAP6|152815|THAP domain containing 6##AK309187|THAP6|152815|THAP domain containing 6##AL833350|THAP6|152815|THAP domain containing 6##BX647579|THAP6|152815|THAP domain containing 6##AK313765|THAP6|152815|THAP domain containing 6	0.888059	CTCF.p2:19:0.888
chr11	17620640	17620746	reg1008952.p2	11.066	+	CU677569 TSC_hg19_v1_chr11_-_17565964 AK290788 AK300936 AB018687 BC016057 AF039699 AF039700 AK225614 NM_005709 NM_153676	-54776	-	TSC_hg19_v1_chr11_-_17498427 NM_000352	-122257	-	U63421 HM635782 TSC_hg19_v1_chr11_-_17498355 AK297560 AF087138 L78207 AB209084	-122350	-	NM_002478 AK314968 TSC_hg19_v1_chr11_+_17741117 BC000353 X56677 BC064493 AB463907 BT007157	120526	+	NM_001112741 NM_004976 AB529092	136826	+	TSC_hg19_v1_chr11_-_18034463 AK294022	413757	-	AK290788|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK300936|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AB018687|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##BC016057|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039699|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039700|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK225614|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_005709|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_153676|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_000352|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##U63421|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##HM635782|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AK297560|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AF087138|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##L78207|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AB209084|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##NM_002478|MYOD1|4654|myogenic differentiation 1##AK314968|MYOD1|4654|myogenic differentiation 1##X56677|MYOD1|4654|myogenic differentiation 1##BC064493|MYOD1|4654|myogenic differentiation 1##BT007157|MYOD1|4654|myogenic differentiation 1##NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##AK294022|SERGEF|26297|secretion regulating guanine nucleotide exchange factor	0.989274	CTCF.p2:-11:0.989
chr2	156080435	156080557	reg1010102.p1	11.065	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-525307	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-1352052	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-1745245	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	1106194	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	1108667	-	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	1211462	+	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	0.991151	CTCF.p2:2:0.991
chr2	228270926	228271078	reg1008797.p1	11.064	+	AY358671 BC137256 BC137257 BC035754 TSC_hg19_v1_chr2_-_228244023 AK026453 NM_024795	-26988	-	AF246239 NM_020194	-78775	+	TSC_hg19_v1_chr2_+_228189983 AK026137 BC093024 AF258660	-80958	+	TSC_hg19_v1_chr2_+_228336861 AK097451	65840	+	TSC_hg19_v1_chr2_+_228336877 NM_001135187 NM_001135188 NM_001135189 NM_004504 BC030592 X89478 BC096272 BC096273 BC096274 BC096275 AB527534 CU688928	66004	+	TSC_hg19_v1_chr2_+_228356287 AK295030	85289	+	AY358671|TM4SF20|79853|transmembrane 4 L six family member 20##BC137256|TM4SF20|79853|transmembrane 4 L six family member 20##BC137257|TM4SF20|79853|transmembrane 4 L six family member 20##BC035754|TM4SF20|79853|transmembrane 4 L six family member 20##AK026453|TM4SF20|79853|transmembrane 4 L six family member 20##NM_024795|TM4SF20|79853|transmembrane 4 L six family member 20##AF246239|MFF|56947|mitochondrial fission factor##NM_020194|MFF|56947|mitochondrial fission factor##AK026137|MFF|56947|mitochondrial fission factor##BC093024|MFF|56947|mitochondrial fission factor##AF258660|MFF|56947|mitochondrial fission factor##AK097451|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135187|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135188|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135189|AGFG1|3267|ArfGAP with FG repeats 1##NM_004504|AGFG1|3267|ArfGAP with FG repeats 1##BC030592|AGFG1|3267|ArfGAP with FG repeats 1##X89478|AGFG1|3267|ArfGAP with FG repeats 1##BC096272|AGFG1|3267|ArfGAP with FG repeats 1##BC096273|AGFG1|3267|ArfGAP with FG repeats 1##BC096274|AGFG1|3267|ArfGAP with FG repeats 1##BC096275|AGFG1|3267|ArfGAP with FG repeats 1##AK295030|AGFG1|3267|ArfGAP with FG repeats 1	0.891938	CTCF.p2:-12:0.892
chr14	53899116	53899249	reg1011264.p1	11.063	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-279132	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-279214	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-279309	-	NM_130851	522087	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	524351	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	964539	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.926376	CTCF.p2:-3:0.926
chr19	49973663	49973795	reg1009335.p1	11.063	+	AK297101 TSC_hg19_v1_chr19_+_49956529 BC014895 AK024182 AK301246	-17199	+	NM_001145396 NM_153329 TSC_hg19_v1_chr19_+_49956479 AK298587 AK074136	-17248	+	TSC_hg19_v1_chr19_-_49955072 AK294687 BC001108 AK000650 AK304476 NM_017916	-18660	-	NM_001204502 NM_001459 TSC_hg19_v1_chr19_+_49977483 U04806 BC006331 BC011914 BC028001 BC126293 BC136464 BC144129	3769	+	NM_001204503 U03858 AK301136 TSC_hg19_v1_chr19_+_49977846 HQ258599	4127	+	TSC_hg19_v1_chr19_+_49990861 AK130605	17127	+	AK297101|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##BC014895|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK024182|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK301246|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##NM_001145396|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##NM_153329|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK298587|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK074136|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK294687|PIH1D1|55011|PIH1 domain containing 1##BC001108|PIH1D1|55011|PIH1 domain containing 1##AK000650|PIH1D1|55011|PIH1 domain containing 1##AK304476|PIH1D1|55011|PIH1 domain containing 1##NM_017916|PIH1D1|55011|PIH1 domain containing 1##NM_001204502|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##NM_001459|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##U04806|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC006331|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC011914|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC028001|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC126293|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC136464|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC144129|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##NM_001204503|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##U03858|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##AK301136|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##HQ258599|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##AK130605|RPL13A|23521|ribosomal protein L13a	0.19988	
chrX	152404595	152404728	reg1010745.p1	11.062	+	NM_032882 NM_001242319	-158648	-	NM_001242319 AK289879 NM_001170944 NM_032882 AK055322	-163866	+	TSC_hg19_v1_chrX_+_152224862 AL136878	-179794	+	AY148486 EU161102 BC017555 AK314979 NM_004988	81433	-	TSC_hg19_v1_chrX_+_152599610 AK122976 NM_001080485	194948	+	NM_001136273	279119	+	NM_032882|PNMA6A|84968|paraneoplastic antigen like 6A##NM_001242319|PNMA6D|100287466|paraneoplastic antigen like 6D##NM_001242319|PNMA6D|100287466|paraneoplastic antigen like 6D##AK289879|PNMA6C|100287428|paraneoplastic antigen like 6C##NM_001170944|PNMA6C|100287428|paraneoplastic antigen like 6C##NM_032882|PNMA6A|84968|paraneoplastic antigen like 6A##AK055322|PNMA6C|100287428|paraneoplastic antigen like 6C##AL136878|PNMA3|29944|paraneoplastic antigen MA3##AY148486|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##EU161102|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##BC017555|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##AK314979|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##NM_004988|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##AK122976|ZNF275|10838|zinc finger protein 275##NM_001080485|ZNF275|10838|zinc finger protein 275##NM_001136273|ZFP92|139735|zinc finger protein 92 homolog (mouse)	0.973294	CTCF.p2:-12:0.973
chr20	62689211	62689360	reg1009454.p2	11.061	+	NM_198723	-847	+	AJ243896 AF270652 BC111390 NM_018419 BC035513 BC038590 BC073971 TSC_hg19_v1_chr20_-_62680993 AB033888	-8347	-	TSC_hg19_v1_chr20_+_62612576 AB527848	-76699	+	NM_003195	4724	+	TSC_hg19_v1_chr20_+_62694558 BC050623 BC014211 BC063636 BC018896 BC050624 BC056407 D50495 AB590039 CR456940 CU690746 EU446904	5275	+	BC054337 TSC_hg19_v1_chr20_-_62710872 BC063010 NM_005873 AK298240 AK290081 X91809 BC022197	21565	-	NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##AJ243896|SOX18|54345|SRY (sex determining region Y)-box 18##AF270652|SOX18|54345|SRY (sex determining region Y)-box 18##BC111390|SOX18|54345|SRY (sex determining region Y)-box 18##NM_018419|SOX18|54345|SRY (sex determining region Y)-box 18##BC035513|SOX18|54345|SRY (sex determining region Y)-box 18##BC038590|SOX18|54345|SRY (sex determining region Y)-box 18##BC073971|SOX18|54345|SRY (sex determining region Y)-box 18##AB033888|SOX18|54345|SRY (sex determining region Y)-box 18##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2##BC050623|TCEA2|6919|transcription elongation factor A (SII), 2##BC014211|TCEA2|6919|transcription elongation factor A (SII), 2##BC018896|TCEA2|6919|transcription elongation factor A (SII), 2##BC050624|TCEA2|6919|transcription elongation factor A (SII), 2##BC056407|TCEA2|6919|transcription elongation factor A (SII), 2##D50495|TCEA2|6919|transcription elongation factor A (SII), 2##CR456940|TCEA2|6919|transcription elongation factor A (SII), 2##EU446904|TCEA2|6919|transcription elongation factor A (SII), 2##BC054337|RGS19|10287|regulator of G-protein signaling 19##BC063010|RGS19|10287|regulator of G-protein signaling 19##NM_005873|RGS19|10287|regulator of G-protein signaling 19##AK298240|RGS19|10287|regulator of G-protein signaling 19##AK290081|RGS19|10287|regulator of G-protein signaling 19##X91809|RGS19|10287|regulator of G-protein signaling 19	0.994894	CTCF.p2:18:0.995
chr9	94537848	94537981	reg1011555.p1	11.060	+	TSC_hg19_v1_chr9_-_94186159 NM_005384	-351732	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	-351870	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	-413715	-	TSC_hg19_v1_chr9_-_94711095 BC033697	173214	-	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	174475	-	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	339750	-	NM_005384|NFIL3|4783|nuclear factor, interleukin 3 regulated##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1	0.999734	CTCF.p2:-9:1.000
chr14	34800961	34801110	reg1008653.p1	11.059	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	-380886	-	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1392545	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-2002499	+	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	130452	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	207850	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	298320	-	BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6	0.032675	
chr15	59050492	59050606	reg1008618.p2	11.059	+	TSC_hg19_v1_chr15_-_59041988 BC126253 BC143935 NM_001110	-8495	-	TSC_hg19_v1_chr15_-_59041833 AK300472	-8727	-	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	-8760	-	TSC_hg19_v1_chr15_+_59063396 AL833610 NM_001040450 NM_001040453	12858	+	BC060514 TSC_hg19_v1_chr15_+_59063500 AK297291 AK075319 AB075509 BC140811 BC144616	12973	+	AK000867 TSC_hg19_v1_chr15_-_59225776 AK055195 BC108656 AK291423 AK131242	175233	-	BC126253|ADAM10|102|ADAM metallopeptidase domain 10##BC143935|ADAM10|102|ADAM metallopeptidase domain 10##NM_001110|ADAM10|102|ADAM metallopeptidase domain 10##AK300472|ADAM10|102|ADAM metallopeptidase domain 10##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10##AL833610|FAM63B|54629|family with sequence similarity 63, member B##NM_001040450|FAM63B|54629|family with sequence similarity 63, member B##NM_001040453|FAM63B|54629|family with sequence similarity 63, member B##BC060514|FAM63B|54629|family with sequence similarity 63, member B##AK297291|FAM63B|54629|family with sequence similarity 63, member B##AK075319|FAM63B|54629|family with sequence similarity 63, member B##AB075509|FAM63B|54629|family with sequence similarity 63, member B##BC140811|FAM63B|54629|family with sequence similarity 63, member B##BC144616|FAM63B|54629|family with sequence similarity 63, member B##AK000867|SLTM|79811|SAFB-like, transcription modulator##AK055195|SLTM|79811|SAFB-like, transcription modulator##BC108656|SLTM|79811|SAFB-like, transcription modulator##AK291423|SLTM|79811|SAFB-like, transcription modulator##AK131242|SLTM|79811|SAFB-like, transcription modulator	0.0	
chr5	146833532	146833680	reg1009231.p1	11.059	+	CU691634 AB384367 EU832180 EU832273 TSC_hg19_v1_chr5_-_146833229 BC039006 D78014 AK297223 NM_001387 Y07818	-341	-	AK094580 NM_001112724 NM_145001 TSC_hg19_v1_chr5_+_146614587 AK315942 BC021666 AK299099	-219000	+	AK294659 NM_181677 NM_181678 AK295347	-372584	-	EU007906 CU687310 EU832163 EU832257 TSC_hg19_v1_chr5_-_146889506	55860	-	BC077077 NM_001197294 TSC_hg19_v1_chr5_-_146889632	56020	-	BC003189 AB011127 TSC_hg19_v1_chr5_-_147162128 AK291280	328488	-	EU832180|DPYSL3|1809|dihydropyrimidinase-like 3##EU832273|DPYSL3|1809|dihydropyrimidinase-like 3##BC039006|DPYSL3|1809|dihydropyrimidinase-like 3##D78014|DPYSL3|1809|dihydropyrimidinase-like 3##AK297223|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3##Y07818|DPYSL3|1809|dihydropyrimidinase-like 3##AK094580|STK32A|202374|serine/threonine kinase 32A##NM_001112724|STK32A|202374|serine/threonine kinase 32A##NM_145001|STK32A|202374|serine/threonine kinase 32A##AK315942|STK32A|202374|serine/threonine kinase 32A##BC021666|STK32A|202374|serine/threonine kinase 32A##AK299099|STK32A|202374|serine/threonine kinase 32A##AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##EU007906|DPYSL3|1809|dihydropyrimidinase-like 3##EU832163|DPYSL3|1809|dihydropyrimidinase-like 3##EU832257|DPYSL3|1809|dihydropyrimidinase-like 3##BC077077|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3##BC003189|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AB011127|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AK291280|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	0.999	CTCF.p2:-1:0.999
chr7	98638135	98638272	reg1011164.p1	11.059	+	TSC_hg19_v1_chr7_+_98476154 AF076974 NM_001244580 NM_003496 AF110377	-162053	+	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	-170527	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	-170576	-	AF199364 AB385491 AF464850 TSC_hg19_v1_chr7_-_98741471	103220	-	TSC_hg19_v1_chr7_-_98741637 BC136804 BC144414	103427	-	TSC_hg19_v1_chr7_-_98741752 AB046845 BC152468 NM_001199847 NM_020429 NM_181349	103546	-	AF076974|TRRAP|8295|transformation/transcription domain-associated protein##NM_001244580|TRRAP|8295|transformation/transcription domain-associated protein##NM_003496|TRRAP|8295|transformation/transcription domain-associated protein##AF110377|TRRAP|8295|transformation/transcription domain-associated protein##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##AF199364|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##AF464850|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##BC136804|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##BC144414|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##AB046845|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##BC152468|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##NM_001199847|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##NM_020429|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##NM_181349|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1	0.986974	CTCF.p2:-18:0.987
chr5	63370500	63370626	reg1010897.p1	11.058	+	AK314187 TSC_hg19_v1_chr5_-_63258084	-112541	-	AF498978 BC069159 NM_000524 AB464441 BC136263 TSC_hg19_v1_chr5_-_63257719 AK291429 AK311460	-112901	-	AK123022 NM_181506 BX649157 AY358733 BC110838 AY280614	-1495925	+	TSC_hg19_v1_chr5_+_63461666 AK090756 AX746601 NM_001113561 NM_178532 BC101277 BC101278 BC101279 AL832580 BC101397	91118	+	BC140707 NM_001029875 BX640900	431918	+	NM_001164442 TSC_hg19_v1_chr5_+_63986235	615622	+	AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AF498978|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC069159|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_000524|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC136263|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK291429|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK123022|LRRC70|100130733|leucine rich repeat containing 70##NM_181506|LRRC70|100130733|leucine rich repeat containing 70##AY358733|LRRC70|100130733|leucine rich repeat containing 70##BC110838|LRRC70|100130733|leucine rich repeat containing 70##AY280614|LRRC70|100130733|leucine rich repeat containing 70##AK090756|RNF180|285671|ring finger protein 180##NM_001113561|RNF180|285671|ring finger protein 180##NM_178532|RNF180|285671|ring finger protein 180##BC101277|RNF180|285671|ring finger protein 180##BC101278|RNF180|285671|ring finger protein 180##BC101279|RNF180|285671|ring finger protein 180##AL832580|RNF180|285671|ring finger protein 180##BC101397|RNF180|285671|ring finger protein 180##BC140707|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001029875|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##BX640900|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001164442|FAM159B|100132916|family with sequence similarity 159, member B	0.462639	CTCF.p2:-12:0.463
chr1	17746466	17746587	reg1011033.p1	11.057	+	AY443100 AB527380 AY422079 NM_207421	-47811	+	AF229067 AK314839 NM_012387 AB017919 AK290507 AK309637 BC025718 AB527709 CU693030	-111823	+	AB026831 NM_016233 BC109091 BC041592 BC109092	-170927	+	BC142946 TSC_hg19_v1_chr1_-_17764885	18336	-	TSC_hg19_v1_chr1_-_17765031 AB384219 BC042141	18484	-	TSC_hg19_v1_chr1_-_17765069 BC053908 NM_001136204	18535	-	AY443100|PADI6|353238|peptidyl arginine deiminase, type VI##AY422079|PADI6|353238|peptidyl arginine deiminase, type VI##NM_207421|PADI6|353238|peptidyl arginine deiminase, type VI##AF229067|PADI4|23569|peptidyl arginine deiminase, type IV##AK314839|PADI4|23569|peptidyl arginine deiminase, type IV##NM_012387|PADI4|23569|peptidyl arginine deiminase, type IV##AB017919|PADI4|23569|peptidyl arginine deiminase, type IV##AK290507|PADI4|23569|peptidyl arginine deiminase, type IV##AK309637|PADI4|23569|peptidyl arginine deiminase, type IV##BC025718|PADI4|23569|peptidyl arginine deiminase, type IV##AB026831|PADI3|51702|peptidyl arginine deiminase, type III##NM_016233|PADI3|51702|peptidyl arginine deiminase, type III##BC109091|PADI3|51702|peptidyl arginine deiminase, type III##BC041592|PADI3|51702|peptidyl arginine deiminase, type III##BC109092|PADI3|51702|peptidyl arginine deiminase, type III##BC142946|RCC2|55920|regulator of chromosome condensation 2##BC042141|RCC2|55920|regulator of chromosome condensation 2##BC053908|RCC2|55920|regulator of chromosome condensation 2##NM_001136204|RCC2|55920|regulator of chromosome condensation 2	0.999759	CTCF.p2:-3:1.000
chr14	36156655	36156780	reg1008999.p1	11.057	+	AF260323 NM_032594 BC130377 BC130379 TSC_hg19_v1_chr14_+_36003369 AB037912 AK096639	-153408	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	-282793	-	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	-395074	+	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	121430	-	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	121678	-	TSC_hg19_v1_chr14_+_36295599 NM_032352 AY827074 BC006250 AK297106 AK310359 AK315424	138886	+	AF260323|INSM2|84684|insulinoma-associated 2##NM_032594|INSM2|84684|insulinoma-associated 2##BC130377|INSM2|84684|insulinoma-associated 2##BC130379|INSM2|84684|insulinoma-associated 2##AB037912|INSM2|84684|insulinoma-associated 2##AK096639|INSM2|84684|insulinoma-associated 2##BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like	0.983859	CTCF.p2:6:0.984
chr20	56767782	56767888	reg1005587.p1	11.056	+	NM_178456 BC035405	-41848	+	NM_199171	-481295	-	TSC_hg19_v1_chr20_-_56285634 BC080635 AF224278 AY128643 NM_199169 NM_199170 AX775887 AK296199	-482213	-	AK299330 AK057583 BC100979 BC100980 TSC_hg19_v1_chr20_-_56884511	116664	-	TSC_hg19_v1_chr20_+_56884770 NM_020673 BC063457 AF091034 AJ276210	116947	+	TSC_hg19_v1_chr20_+_56884847 BC015710	117009	+	NM_178456|C20orf85|128602|chromosome 20 open reading frame 85##BC035405|C20orf85|128602|chromosome 20 open reading frame 85##NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##BC080635|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AF224278|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AY128643|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199169|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199170|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK296199|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK299330|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##AK057583|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100979|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100980|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##NM_020673|RAB22A|57403|RAB22A, member RAS oncogene family##BC063457|RAB22A|57403|RAB22A, member RAS oncogene family##AF091034|RAB22A|57403|RAB22A, member RAS oncogene family##AJ276210|RAB22A|57403|RAB22A, member RAS oncogene family##BC015710|RAB22A|57403|RAB22A, member RAS oncogene family	0.997727	CTCF.p2:-1:0.998
chr7	118816192	118816314	reg1011019.p1	11.056	+	NM_019644 AK302407	-951519	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-992082	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-1302710	-	AK307139 AB028967 NM_012281	1097451	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	1681767	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	1681907	-	NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12	0.987003	CTCF.p2:14:0.987
chr8	32081160	32081266	reg1008355.p2	11.056	+	NM_013962	-583946	+	TSC_hg19_v1_chr8_+_30891325 AF091214	-1189922	+	AF195513 AY077841 NM_001015508	-1189983	-	AK298132 NM_001160002 NM_001160004 NM_001160005 NM_001160007 NM_001160008 NM_004495 NM_013956 NM_013957 NM_013958 NM_013960 NM_013964 M94168 BC006492 TSC_hg19_v1_chr8_+_32405834 M94167 AF026146 AK097005 AK290730 L12261	324576	+	AK289927 NM_013959	423037	+	NM_001159996 AK293270 AK293240	498179	+	NM_013962|NRG1|3084|neuregulin 1##AF091214|WRN|7486|Werner syndrome, RecQ helicase-like##AF195513|PURG|29942|purine-rich element binding protein G##AY077841|PURG|29942|purine-rich element binding protein G##NM_001015508|PURG|29942|purine-rich element binding protein G##AK298132|NRG1|3084|neuregulin 1##NM_001160002|NRG1|3084|neuregulin 1##NM_001160004|NRG1|3084|neuregulin 1##NM_001160005|NRG1|3084|neuregulin 1##NM_001160007|NRG1|3084|neuregulin 1##NM_001160008|NRG1|3084|neuregulin 1##NM_004495|NRG1|3084|neuregulin 1##NM_013956|NRG1|3084|neuregulin 1##NM_013957|NRG1|3084|neuregulin 1##NM_013958|NRG1|3084|neuregulin 1##NM_013960|NRG1|3084|neuregulin 1##NM_013964|NRG1|3084|neuregulin 1##M94168|NRG1|3084|neuregulin 1##BC006492|NRG1|3084|neuregulin 1##M94167|NRG1|3084|neuregulin 1##AF026146|NRG1|3084|neuregulin 1##AK097005|NRG1|3084|neuregulin 1##AK290730|NRG1|3084|neuregulin 1##L12261|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1##NM_001159996|NRG1|3084|neuregulin 1##AK293270|NRG1|3084|neuregulin 1##AK293240|NRG1|3084|neuregulin 1	0.859358	CTCF.p2:10:0.859
chr12	105270994	105271133	reg1010030.p1	11.055	+	TSC_hg19_v1_chr12_+_105153261 AF131762	-117786	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-419976	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-420255	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	51200	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	109027	+	TSC_hg19_v1_chr12_+_105380115 BC032326 CU689336 DQ891649 DQ894838	109058	+	AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45##BC032326|C12orf45|121053|chromosome 12 open reading frame 45##DQ891649|C12orf45|121053|chromosome 12 open reading frame 45##DQ894838|C12orf45|121053|chromosome 12 open reading frame 45	0.0	
chr12	111057518	111057674	reg1010570.p1	11.055	+	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	-5671	+	AK124744 TSC_hg19_v1_chr12_-_111021124	-36470	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	-36526	-	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	69362	-	AK293543 NM_001040107	70003	-	L07395 AK297882 AB590512 EU831993 EU832086 TSC_hg19_v1_chr12_-_111180593	122950	-	AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1##L07395|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK297882|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU831993|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU832086|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme	0.043606	
chr7	142578779	142578908	reg1010276.p1	11.055	+	TSC_hg19_v1_chr7_+_142560518 BC110606 BC110607	-18328	+	TSC_hg19_v1_chr7_+_142552837 NM_004445 D83492 BC015495 BC051028 BC056159	-26118	+	M12426 TSC_hg19_v1_chr7_+_142495248	-83648	+	AF304463 AF365928 AJ243500 AJ243501 AF365927 AK291707 NM_018646 AJ487964	4540	-	BC034740 NM_019841 AF304464	52018	-	BC014596 NM_178829 AB083483 AB083484 AB464498	57816	+	BC110606|EPHB6|2051|EPH receptor B6##BC110607|EPHB6|2051|EPH receptor B6##NM_004445|EPHB6|2051|EPH receptor B6##D83492|EPHB6|2051|EPH receptor B6##BC015495|EPHB6|2051|EPH receptor B6##BC051028|EPHB6|2051|EPH receptor B6##BC056159|EPHB6|2051|EPH receptor B6##AF304463|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AF365928|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AJ243500|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AJ243501|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AF365927|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AK291707|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##NM_018646|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AJ487964|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##BC034740|TRPV5|56302|transient receptor potential cation channel, subfamily V, member 5##NM_019841|TRPV5|56302|transient receptor potential cation channel, subfamily V, member 5##AF304464|TRPV5|56302|transient receptor potential cation channel, subfamily V, member 5##BC014596|C7orf34|135927|chromosome 7 open reading frame 34##NM_178829|C7orf34|135927|chromosome 7 open reading frame 34##AB083483|C7orf34|135927|chromosome 7 open reading frame 34##AB083484|C7orf34|135927|chromosome 7 open reading frame 34	0.705496	CTCF.p2:-4:0.705
chr11	9159391	9159524	reg1009539.p1	11.054	+	BC111690 AK131552 AK123039 NM_001170690 NM_020974 TSC_hg19_v1_chr11_-_9113185	-46319	-	BC008835 TSC_hg19_v1_chr11_-_9025549 AK024750 AK098694 AK296484 NM_020645	-133894	-	BC040124 TSC_hg19_v1_chr11_-_8986002	-173448	-	TSC_hg19_v1_chr11_-_9225783 AK302478	66364	-	AB029014 TSC_hg19_v1_chr11_-_9286891 BC071596 NM_001243254 NM_015213	127405	-	AK303339 TSC_hg19_v1_chr11_-_9336043 BC064366 BC091524	176602	-	BC111690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK131552|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK123039|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_001170690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_020974|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##BC008835|NRIP3|56675|nuclear receptor interacting protein 3##AK024750|NRIP3|56675|nuclear receptor interacting protein 3##AK098694|NRIP3|56675|nuclear receptor interacting protein 3##AK296484|NRIP3|56675|nuclear receptor interacting protein 3##NM_020645|NRIP3|56675|nuclear receptor interacting protein 3##BC040124|TMEM9B|56674|TMEM9 domain family, member B##AK302478|DENND5A|23258|DENN/MADD domain containing 5A##AB029014|DENND5A|23258|DENN/MADD domain containing 5A##BC071596|DENND5A|23258|DENN/MADD domain containing 5A##NM_001243254|DENND5A|23258|DENN/MADD domain containing 5A##NM_015213|DENND5A|23258|DENN/MADD domain containing 5A##AK303339|TMEM41B|440026|transmembrane protein 41B##BC064366|TMEM41B|440026|transmembrane protein 41B##BC091524|TMEM41B|440026|transmembrane protein 41B	0.018961	
chr11	95569312	95569444	reg1010908.p1	11.054	+	D42054 BC039711 BC029385 AB385276 AY225092 CU691748 TSC_hg19_v1_chr11_+_95523869	-45538	+	TSC_hg19_v1_chr11_+_95523702 NM_001243776 NM_001243777 NM_014679 BC001233 AK291245 AK293277 AK098647 BC031048 AY239292	-45703	+	AK021591 TSC_hg19_v1_chr11_-_95522975 BC026013 NM_144664	-46412	-	AK293243 TSC_hg19_v1_chr11_-_95657092 AK302940 BC040432 AK291277	87673	-	BC052990 BC012086 TSC_hg19_v1_chr11_-_95657272 BC034474 BX647997 NM_001243571 NM_016156 NM_201278 NM_201281 AB028996	87978	-	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	507025	-	D42054|CEP57|9702|centrosomal protein 57kDa##BC039711|CEP57|9702|centrosomal protein 57kDa##BC029385|CEP57|9702|centrosomal protein 57kDa##AY225092|CEP57|9702|centrosomal protein 57kDa##NM_001243776|CEP57|9702|centrosomal protein 57kDa##NM_001243777|CEP57|9702|centrosomal protein 57kDa##NM_014679|CEP57|9702|centrosomal protein 57kDa##BC001233|CEP57|9702|centrosomal protein 57kDa##AK291245|CEP57|9702|centrosomal protein 57kDa##AK293277|CEP57|9702|centrosomal protein 57kDa##AK098647|CEP57|9702|centrosomal protein 57kDa##BC031048|CEP57|9702|centrosomal protein 57kDa##AY239292|CEP57|9702|centrosomal protein 57kDa##AK021591|FAM76B|143684|family with sequence similarity 76, member B##BC026013|FAM76B|143684|family with sequence similarity 76, member B##NM_144664|FAM76B|143684|family with sequence similarity 76, member B##AK293243|MTMR2|8898|myotubularin related protein 2##AK302940|MTMR2|8898|myotubularin related protein 2##BC040432|MTMR2|8898|myotubularin related protein 2##AK291277|MTMR2|8898|myotubularin related protein 2##BC052990|MTMR2|8898|myotubularin related protein 2##BC012086|MTMR2|8898|myotubularin related protein 2##BC034474|MTMR2|8898|myotubularin related protein 2##BX647997|MTMR2|8898|myotubularin related protein 2##NM_001243571|MTMR2|8898|myotubularin related protein 2##NM_016156|MTMR2|8898|myotubularin related protein 2##NM_201278|MTMR2|8898|myotubularin related protein 2##NM_201281|MTMR2|8898|myotubularin related protein 2##AB028996|MTMR2|8898|myotubularin related protein 2##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)	0.0	
chr1	200948839	200948947	reg1009660.p1	11.053	+	AK316510 NM_001142569 TSC_hg19_v1_chr1_+_200864027 AK303885	-84896	+	TSC_hg19_v1_chr1_+_200860668 NM_018265 AK001583 AK001763 BC106877	-88247	+	BC126386 BC126388 AK315339 NM_005298	-106770	+	AM177180 AB527174 BC137281 BC144557 TSC_hg19_v1_chr1_-_200992598	43661	-	TSC_hg19_v1_chr1_-_200992826 AB007918 NM_001252100 NM_001252102 NM_001252103 NM_017596	43938	-	TSC_hg19_v1_chr1_+_200993085 AK022893 BC037533 BC016656	44194	+	AK316510|C1orf106|55765|chromosome 1 open reading frame 106##NM_001142569|C1orf106|55765|chromosome 1 open reading frame 106##AK303885|C1orf106|55765|chromosome 1 open reading frame 106##NM_018265|C1orf106|55765|chromosome 1 open reading frame 106##AK001583|C1orf106|55765|chromosome 1 open reading frame 106##AK001763|C1orf106|55765|chromosome 1 open reading frame 106##BC106877|C1orf106|55765|chromosome 1 open reading frame 106##BC126386|GPR25|2848|G protein-coupled receptor 25##BC126388|GPR25|2848|G protein-coupled receptor 25##AK315339|GPR25|2848|G protein-coupled receptor 25##NM_005298|GPR25|2848|G protein-coupled receptor 25##AM177180|KIF21B|23046|kinesin family member 21B##BC137281|KIF21B|23046|kinesin family member 21B##BC144557|KIF21B|23046|kinesin family member 21B##AB007918|KIF21B|23046|kinesin family member 21B##NM_001252100|KIF21B|23046|kinesin family member 21B##NM_001252102|KIF21B|23046|kinesin family member 21B##NM_001252103|KIF21B|23046|kinesin family member 21B##NM_017596|KIF21B|23046|kinesin family member 21B	0.997724	CTCF.p2:0:0.998
chr15	72023025	72023142	reg1010693.p1	11.053	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	-183503	+	NM_024817 BC140868	-589273	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-615212	-	AF121129 NM_014249 NM_016346 AF148128	79829	+	AK097557 NM_001166340	383515	+	NM_001172109 NM_001172110	386135	+	AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172109|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172110|SENP8|123228|SUMO/sentrin specific peptidase family member 8	0.600214	CTCF.p2:0:0.600
chr6	33712277	33712403	reg1010459.p1	11.053	+	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	-32827	-	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	-32877	-	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	-123146	+	AK056586 AK223572 AK289935 BC089389 NM_001142883 NM_054111	2381	-	AK301083 NM_001143944	42375	-	TSC_hg19_v1_chr6_-_33756897 BC051803	44551	-	AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##AK056586|IP6K3|117283|inositol hexakisphosphate kinase 3##AK223572|IP6K3|117283|inositol hexakisphosphate kinase 3##AK289935|IP6K3|117283|inositol hexakisphosphate kinase 3##BC089389|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_001142883|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_054111|IP6K3|117283|inositol hexakisphosphate kinase 3##AK301083|LEMD2|221496|LEM domain containing 2##NM_001143944|LEMD2|221496|LEM domain containing 2##BC051803|LEMD2|221496|LEM domain containing 2	0.999522	CTCF.p2:8:1.000
chr7	70294264	70294393	reg1008104.p1	11.053	+	TSC_hg19_v1_chr7_+_70231164 AK296981	-63123	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-1229740	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-1229999	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	303460	+	AK123862 TSC_hg19_v1_chr7_-_71801809	1507450	-	NM_001017440 TSC_hg19_v1_chr7_-_71802376	1507976	-	AK296981|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1##NM_001017440|CALN1|83698|calneuron 1	0.983918	CTCF.p2:-10:0.984
chr10	13116927	13117067	reg1011690.p1	11.052	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	-73298	-	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-725220	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-725280	+	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	25148	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	86571	+	BC018068 NM_145314	159330	-	AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10##BC018068|UCMA|221044|upper zone of growth plate and cartilage matrix associated##NM_145314|UCMA|221044|upper zone of growth plate and cartilage matrix associated	0.999743	CTCF.p2:15:1.000
chr14	106004341	106004427	reg1007168.p1	11.052	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-11443	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-46748	+	BX248038 NM_001134877	-47865	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	87952	-	BC040042 TSC_hg19_v1_chr14_-_106110945	106539	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	106732	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.981822	CTCF.p2:-2:0.982
chr8	105142529	105142634	reg1007972.p1	11.052	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	-311006	+	AK126939 NM_001100117	-629606	+	TSC_hg19_v1_chr8_+_104427659 AK001874	-714916	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	209471	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	336634	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	458594	-	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK001874|DCAF13|25879|DDB1 and CUL4 associated factor 13##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12	0.992958	CTCF.p2:15:0.993
chr10	18504013	18504155	reg1010916.p1	11.051	+	NM_201593 NM_201596 NM_201597 S60415 BC136409 AF137376 AF423191 AY393860 AY675091 AK296471 AK311694 AK307526 NM_001167945 NM_201571 NM_201572 AK293837	-74377	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	-263255	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	-405691	+	NM_000724 AB208917 U95019	45556	+	AK310943 NM_201590	125529	+	NM_201570 AK299873 AK295113	185479	+	NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK310943|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201590|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	0.055297	
chr11	60468820	60468967	reg1011828.p1	11.051	+	AF237905 NM_031457 AK310969 AK310884 AK315901 BC022895 AK308413 AF350504 AK310872	-1761	+	AY324188 AY324189 AY324190 NM_001012417 NM_001100909 BC140799 BC171746	-185945	+	AK000224 AK309275 NM_001164470 NM_017716 BC029793	-208637	+	NM_001098835 NM_152717 AK300233 BC031610 AK091846 AX747218 AY584608 AY584609	55516	+	AK122633 NM_206893 BC137259 BC137263	83952	+	NM_024098 TSC_hg19_v1_chr11_+_60609543 AK025974 AK302329 AK123775 BC001378 DQ892603 DQ895844 DQ501251	140628	+	AF237905|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_031457|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310969|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310884|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK315901|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##BC022895|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK308413|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AF350504|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310872|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AY324188|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324189|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324190|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001012417|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001100909|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC140799|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC171746|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AK000224|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_001164470|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_017716|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##BC029793|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_001098835|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##NM_152717|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK300233|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##BC031610|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK091846|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584608|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584609|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK122633|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_206893|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137259|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137263|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_024098|CCDC86|79080|coiled-coil domain containing 86##AK025974|CCDC86|79080|coiled-coil domain containing 86##AK302329|CCDC86|79080|coiled-coil domain containing 86##AK123775|CCDC86|79080|coiled-coil domain containing 86##BC001378|CCDC86|79080|coiled-coil domain containing 86##DQ892603|CCDC86|79080|coiled-coil domain containing 86##DQ895844|CCDC86|79080|coiled-coil domain containing 86##DQ501251|CCDC86|79080|coiled-coil domain containing 86	0.596305	CTCF.p2:-5:0.596
chr20	62127598	62127699	reg1007635.p1	11.051	+	BT007043 AB527167 Y15065 BC000699 AF110020 TSC_hg19_v1_chr20_-_62104002 AK293727 AF033348 AF074247 D82346 NM_004518 NM_172106 NM_172107 NM_172108 NM_172109	-23719	-	X89741 Y08421 AB590558 AK314907 TSC_hg19_v1_chr20_-_61992648 BC096290 BC096291 BC096292 BC096293 L35901 NM_000744 U62433	-135017	-	BC043183 NM_020882 BC041767	-203092	+	TSC_hg19_v1_chr20_-_62130437 X70940 AK307536 NM_001958 BC110409	2865	-	TSC_hg19_v1_chr20_+_62152117 BC002531 NM_024299 AK024699 AK311318	24485	+	TSC_hg19_v1_chr20_-_62168681 AB527573 X78549 AK301691 AK315232 BC035843 NM_005975 AK301364	41056	-	BT007043|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##Y15065|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##BC000699|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF110020|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AK293727|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF033348|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF074247|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##D82346|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_004518|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172106|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172107|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172108|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172109|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##X89741|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##Y08421|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##AK314907|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096290|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096291|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096292|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096293|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##L35901|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##NM_000744|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##U62433|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC043183|COL20A1|57642|collagen, type XX, alpha 1##NM_020882|COL20A1|57642|collagen, type XX, alpha 1##BC041767|COL20A1|57642|collagen, type XX, alpha 1##X70940|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##AK307536|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##NM_001958|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC110409|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##X78549|PTK6|5753|PTK6 protein tyrosine kinase 6##AK301691|PTK6|5753|PTK6 protein tyrosine kinase 6##AK315232|PTK6|5753|PTK6 protein tyrosine kinase 6##BC035843|PTK6|5753|PTK6 protein tyrosine kinase 6##NM_005975|PTK6|5753|PTK6 protein tyrosine kinase 6##AK301364|PTK6|5753|PTK6 protein tyrosine kinase 6	1.008041	CTCF.p2:-14:0.998
chr8	27850183	27850317	reg1011622.p1	11.051	+	TSC_hg19_v1_chr8_-_27695574 AK301836	-154691	-	TSC_hg19_v1_chr8_-_27695325 AF189722 AB027250 AK027291 AF237709 BC015191 AB027249 NM_018492	-154903	-	AF306677 AF306678 TSC_hg19_v1_chr8_+_27632070 AF306675 AY882862 NM_001017420 AK124215 AF306679 AL832666 BC017933 BC034641	-218251	+	NM_173833	118	-	AB075870 NM_001010906	91137	-	NM_018091 TSC_hg19_v1_chr8_+_27950679 AK302140 AK296475 AK022626 AK295574 AK001284 AK293424 AK315985 AK316053 AK298265 BC001240 AL834273 AB463602 AM392633	100407	+	AK301836|PBK|55872|PDZ binding kinase##AF189722|PBK|55872|PDZ binding kinase##AB027250|PBK|55872|PDZ binding kinase##AK027291|PBK|55872|PDZ binding kinase##AF237709|PBK|55872|PDZ binding kinase##BC015191|PBK|55872|PDZ binding kinase##AB027249|PBK|55872|PDZ binding kinase##NM_018492|PBK|55872|PDZ binding kinase##AF306677|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF306678|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF306675|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AY882862|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##NM_001017420|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AK124215|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF306679|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AL832666|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##BC017933|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##BC034641|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##NM_173833|SCARA5|286133|scavenger receptor class A, member 5 (putative)##AB075870|C8orf80|389643|chromosome 8 open reading frame 80##NM_001010906|C8orf80|389643|chromosome 8 open reading frame 80##NM_018091|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK302140|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK296475|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK022626|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK295574|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK001284|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK293424|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK315985|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK316053|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK298265|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##BC001240|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AL834273|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AM392633|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)	0.020972	
chr20	1783074	1783212	reg1008657.p1	11.050	+	AY748247 AY748248 CU687894 BC064532 BC020629 AK292745 NM_001039508 NM_018556 NM_080816	-144752	-	AB590891 CU692960 BC131747 Y10376 BC025286 BC075835 TSC_hg19_v1_chr20_-_1600656 AK289866 AK313517 BX537992 NM_001083910 NM_001135844 NM_006065	-182505	-	DQ891297 EU176577 BC033502 NM_178460	-244821	-	TSC_hg19_v1_chr20_+_1874780 NM_001040022	91653	+	TSC_hg19_v1_chr20_+_1874954 BC075849 AK290776	91846	+	TSC_hg19_v1_chr20_+_1875136 AK298243	91991	+	AY748247|SIRPG|55423|signal-regulatory protein gamma##AY748248|SIRPG|55423|signal-regulatory protein gamma##BC064532|SIRPG|55423|signal-regulatory protein gamma##BC020629|SIRPG|55423|signal-regulatory protein gamma##AK292745|SIRPG|55423|signal-regulatory protein gamma##NM_001039508|SIRPG|55423|signal-regulatory protein gamma##NM_018556|SIRPG|55423|signal-regulatory protein gamma##NM_080816|SIRPG|55423|signal-regulatory protein gamma##BC131747|SIRPB1|10326|signal-regulatory protein beta 1##Y10376|SIRPB1|10326|signal-regulatory protein beta 1##BC025286|SIRPB1|10326|signal-regulatory protein beta 1##BC075835|SIRPB1|10326|signal-regulatory protein beta 1##AK289866|SIRPB1|10326|signal-regulatory protein beta 1##BX537992|SIRPB1|10326|signal-regulatory protein beta 1##NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1##NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1##NM_006065|SIRPB1|10326|signal-regulatory protein beta 1##DQ891297|SIRPD|128646|signal-regulatory protein delta##EU176577|SIRPD|128646|signal-regulatory protein delta##BC033502|SIRPD|128646|signal-regulatory protein delta##NM_178460|SIRPD|128646|signal-regulatory protein delta##NM_001040022|SIRPA|140885|signal-regulatory protein alpha##BC075849|SIRPA|140885|signal-regulatory protein alpha##AK290776|SIRPA|140885|signal-regulatory protein alpha##AK298243|SIRPA|140885|signal-regulatory protein alpha	0.988281	CTCF.p2:-5:0.988
chr2	120511056	120511178	reg1009475.p1	11.050	+	TSC_hg19_v1_chr2_+_120436776 AK057313 AK308503 AK311734	-74336	+	TSC_hg19_v1_chr2_+_120436745 AK130088 NM_001105198 NM_001105199 NM_030577 AK096890 AK299078 BC004404	-74383	+	AK293665 NM_001029996 TSC_hg19_v1_chr2_+_120302024 BC036530 AK304416	-209075	+	M68941 NM_002830 TSC_hg19_v1_chr2_+_120517497 AK314836 BC010674	6283	+	TSC_hg19_v1_chr2_+_120770604 NM_001184937 NM_001184939 NM_020909	259486	+	TSC_hg19_v1_chr2_+_120770652 AK023019 BC054508 AK290895 BC032822 NM_001184938	259616	+	AK057313|LOC100125918|100125918|uncharacterized LOC100125918##AK308503|TMEM177|80775|transmembrane protein 177##AK130088|TMEM177|80775|transmembrane protein 177##NM_001105198|TMEM177|80775|transmembrane protein 177##NM_001105199|TMEM177|80775|transmembrane protein 177##NM_030577|TMEM177|80775|transmembrane protein 177##AK096890|TMEM177|80775|transmembrane protein 177##AK299078|TMEM177|80775|transmembrane protein 177##BC004404|TMEM177|80775|transmembrane protein 177##AK293665|PCDP1|200373|primary ciliary dyskinesia protein 1##NM_001029996|PCDP1|200373|primary ciliary dyskinesia protein 1##BC036530|PCDP1|200373|primary ciliary dyskinesia protein 1##AK304416|PCDP1|200373|primary ciliary dyskinesia protein 1##M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_001184937|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184939|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_020909|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK023019|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC054508|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK290895|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC032822|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184938|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5	0.696316	CTCF.p2:-2:0.696
chr5	173352620	173352753	reg1010455.p1	11.050	+	TSC_hg19_v1_chr5_+_173315343 NM_030627	-37308	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-309013	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-309058	-	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	63504	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	120025	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	120066	+	NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein	0.075214	
chr1	32014593	32014718	reg1008395.p1	11.049	+	AK093784 AK316357 AX748305 NM_001199039 NM_018565 AK296118	-127968	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	-128589	+	NM_001199037 AK298512	-131622	+	NM_001204414 NM_022164 TSC_hg19_v1_chr1_+_32042115 AK292770 AK075398 AK296322 AK298382	27448	+	TSC_hg19_v1_chr1_+_32042122 AY358421	27467	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	27487	+	AK093784|SERINC2|347735|serine incorporator 2##AK316357|SERINC2|347735|serine incorporator 2##NM_001199039|SERINC2|347735|serine incorporator 2##NM_018565|SERINC2|347735|serine incorporator 2##AK296118|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##NM_001204414|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_022164|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK292770|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK075398|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK296322|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298382|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AY358421|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1	0.999885	CTCF.p2:5:1.000
chr7	138759893	138760037	reg1010690.p1	11.049	+	TSC_hg19_v1_chr7_-_138720787 BC008842 NM_080660 BC020784	-39131	-	TSC_hg19_v1_chr7_-_138666114 AM989468 AM989469 AM989472 AM989473 AM989474 NM_001164665 NM_020910	-93732	-	BC109304 BC109305 AF245517 AK292945 NM_020632 NM_130840	-277071	-	AK055851 BX647974 TSC_hg19_v1_chr7_-_138794101	34136	-	TSC_hg19_v1_chr7_-_138794133 AK292811	34208	-	BC025308 BC033105 BC040956 NM_020119 NM_024625 BX571742 TSC_hg19_v1_chr7_-_138794467	34465	-	BC008842|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##NM_080660|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##BC020784|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##AM989468|KIAA1549|57670|KIAA1549##AM989469|KIAA1549|57670|KIAA1549##NM_001164665|KIAA1549|57670|KIAA1549##NM_020910|KIAA1549|57670|KIAA1549##BC109304|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC109305|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AF245517|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AK292945|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_020632|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_130840|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AK055851|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BX647974|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##AK292811|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BC025308|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BC033105|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BC040956|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##NM_020119|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##NM_024625|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BX571742|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1	0.99834	CTCF.p2:20:0.998
chr9	109904346	109904498	reg1008720.p1	11.049	+	TSC_hg19_v1_chr9_+_109686439 CR749850	-217953	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	-279058	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-1447504	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	141110	+	TSC_hg19_v1_chr9_+_110045559 AK125226 AK223479	141135	+	TSC_hg19_v1_chr9_+_110045567 D21090	141180	+	CR749850|ZNF462|58499|zinc finger protein 462##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK125226|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK223479|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##D21090|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.968215	CTCF.p2:2:0.968
chr15	58474854	58475001	reg1011242.p1	11.048	+	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	-44441	+	NM_001206897 NM_003888 NM_170696	-116807	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	-117049	-	NM_000236 X07228 AK293324 AK309448 TSC_hg19_v1_chr15_+_58724189 D83548 BC132825 BC136495 J03895 J03540 AB528021 HQ258274	249275	+	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	566862	-	TSC_hg19_v1_chr15_-_59041833 AK300472	566895	-	AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_000236|LIPC|3990|lipase, hepatic##X07228|LIPC|3990|lipase, hepatic##AK293324|LIPC|3990|lipase, hepatic##AK309448|LIPC|3990|lipase, hepatic##D83548|LIPC|3990|lipase, hepatic##BC132825|LIPC|3990|lipase, hepatic##BC136495|LIPC|3990|lipase, hepatic##J03895|LIPC|3990|lipase, hepatic##J03540|LIPC|3990|lipase, hepatic##HQ258274|LIPC|3990|lipase, hepatic##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10##AK300472|ADAM10|102|ADAM metallopeptidase domain 10	0.981315	CTCF.p2:10:0.981
chr17	5342525	5342677	reg1009182.p2	11.048	+	BC000435 TSC_hg19_v1_chr17_-_5342437 AK291516 L04636 NM_001212 X75913	-138	-	M69039 BT019898 BT019899 CU680662 DQ891331 DQ893366 DQ894514 DQ896683 AB590234 TSC_hg19_v1_chr17_-_5342406 BC013731 AJ297362	-202	-	TSC_hg19_v1_chr17_+_5323504 BC013831 AK096001 AK300409 BC046349 BC004451 AK295394 BC062623 BC051849 AY680654 AY680655 AY680656 AY680657 AY680658 AY680659 AY680660 CU690862	-19101	+	BC030017 TSC_hg19_v1_chr17_-_5372147 AK295074	29503	-	BC141954 AK025625 BC141953 TSC_hg19_v1_chr17_-_5372206	29591	-	BC050409 TSC_hg19_v1_chr17_-_5372303 AK314580 AK295760 NM_001199699 NM_020162	29706	-	BC000435|C1QBP|708|complement component 1, q subcomponent binding protein##AK291516|C1QBP|708|complement component 1, q subcomponent binding protein##L04636|C1QBP|708|complement component 1, q subcomponent binding protein##NM_001212|C1QBP|708|complement component 1, q subcomponent binding protein##X75913|C1QBP|708|complement component 1, q subcomponent binding protein##BT019898|C1QBP|708|complement component 1, q subcomponent binding protein##BT019899|C1QBP|708|complement component 1, q subcomponent binding protein##DQ891331|C1QBP|708|complement component 1, q subcomponent binding protein##DQ893366|C1QBP|708|complement component 1, q subcomponent binding protein##DQ894514|C1QBP|708|complement component 1, q subcomponent binding protein##DQ896683|C1QBP|708|complement component 1, q subcomponent binding protein##BC013731|C1QBP|708|complement component 1, q subcomponent binding protein##AJ297362|C1QBP|708|complement component 1, q subcomponent binding protein##BC013831|RPAIN|84268|RPA interacting protein##AK096001|RPAIN|84268|RPA interacting protein##AK300409|RPAIN|84268|RPA interacting protein##BC046349|RPAIN|84268|RPA interacting protein##BC004451|RPAIN|84268|RPA interacting protein##AK295394|RPAIN|84268|RPA interacting protein##BC062623|RPAIN|84268|RPA interacting protein##BC051849|RPAIN|84268|RPA interacting protein##AY680654|RPAIN|84268|RPA interacting protein##AY680655|RPAIN|84268|RPA interacting protein##AY680656|RPAIN|84268|RPA interacting protein##AY680657|RPAIN|84268|RPA interacting protein##AY680658|RPAIN|84268|RPA interacting protein##AY680659|RPAIN|84268|RPA interacting protein##AY680660|RPAIN|84268|RPA interacting protein##BC030017|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33##AK295074|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33##AK025625|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33##BC050409|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33##AK314580|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33##AK295760|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33##NM_001199699|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33##NM_020162|DHX33|56919|DEAH (Asp-Glu-Ala-His) box polypeptide 33	1.965898	CTCF.p2:49:0.969	CTCF.p2:-50:0.997
chr18	25179309	25179424	reg1006799.p1	11.048	+	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-414133	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	-456487	-	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	-733650	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	577671	-	TSC_hg19_v1_chr18_-_25757363 NM_001792	578031	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	3443336	-	AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3	0.976702	CTCF.p2:1:0.977
chr19	51672704	51672814	reg1009727.p1	11.047	+	TSC_hg19_v1_chr19_+_51645559 NM_014385 NM_016543 AK314875 AF193441 BC028150 AJ007395 AF178981 AF170485 AJ130710 AJ130711 AJ130712 AJ130713	-27168	+	NM_001198558 NM_014441 AF227924 AK297043 BC035365 AB026265 AY358913 AK315272 AF247180 DQ892476 DQ895688	-44540	+	TSC_hg19_v1_chr19_-_51611637 AK291173 NM_145232	-61118	-	AK293934 TSC_hg19_v1_chr19_+_51728362 NM_001082618 NM_001177608 NM_001772 AK309558 M23197 AY162464	55584	+	BC028152 AK304810 TSC_hg19_v1_chr19_+_51728370 AB590304 DQ891726 DQ894903	55612	+	AK097554 NM_173635	88204	+	NM_014385|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##NM_016543|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AK314875|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF193441|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##BC028150|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ007395|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF178981|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF170485|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130710|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130711|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130712|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130713|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##NM_001198558|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##NM_014441|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AF227924|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK297043|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##BC035365|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AB026265|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AY358913|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK315272|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AF247180|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##DQ892476|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##DQ895688|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK291173|CTU1|90353|cytosolic thiouridylase subunit 1 homolog (S. pombe)##NM_145232|CTU1|90353|cytosolic thiouridylase subunit 1 homolog (S. pombe)##AK293934|CD33|945|CD33 molecule##NM_001082618|CD33|945|CD33 molecule##NM_001177608|CD33|945|CD33 molecule##NM_001772|CD33|945|CD33 molecule##AK309558|CD33|945|CD33 molecule##M23197|CD33|945|CD33 molecule##AY162464|CD33|945|CD33 molecule##BC028152|CD33|945|CD33 molecule##AK304810|CD33|945|CD33 molecule##DQ891726|CD33|945|CD33 molecule##DQ894903|CD33|945|CD33 molecule##AK097554|C19orf75|284369|chromosome 19 open reading frame 75##NM_173635|C19orf75|284369|chromosome 19 open reading frame 75	0.692959	CTCF.p2:5:0.693
chr4	42752233	42752363	reg1009712.p1	11.047	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	-93210	-	NM_001080505	-352443	+	AB126828 AB126829 NM_001159547 NM_207406	-597404	-	AB528853 NM_001080476	142983	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	1698255	-	AK123347 NM_198353	1698525	-	BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8	0.0	
chr4	90823124	90823211	reg1005830.p1	11.047	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-7105	+	NM_001146055	-63721	-	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	-64925	-	AK097436 NM_001145065 AK310825 AB051467 BC021681	225551	+	BC051694 NM_207491	333014	+	AB209318 NM_001510 AK308611	2402425	+	AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##NM_001146055|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2	0.276475	CTCF.p2:14:0.276
chr2	101223415	101223562	reg1007980.p1	11.046	+	TSC_hg19_v1_chr2_+_101179454 NM_024065 BC001021 AK300827 AF110511 AF267853	-44052	+	AB164464 NM_001011717	-136545	+	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	-189391	-	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	213278	+	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	395234	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	544295	-	NM_024065|PDCL3|79031|phosducin-like 3##BC001021|PDCL3|79031|phosducin-like 3##AK300827|PDCL3|79031|phosducin-like 3##AF110511|PDCL3|79031|phosducin-like 3##AF267853|PDCL3|79031|phosducin-like 3##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S##BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)	0.206022	CTCF.p2:1:0.206
chr22	21644748	21644862	reg1007861.p2	11.046	+	BC062565 AJ000730 BC008814 NM_004173 TSC_hg19_v1_chr22_-_21386851	-257954	-	BC064805 NM_001159554 AB002058 CR456535 BC109209 AB528202 CU013135 CU013423 AK309079 NM_005446 BC047287 BC063553 BC033488	-275345	+	TSC_hg19_v1_chr22_+_21356508 AK096901 BC065749	-288324	+	NM_001128633	92857	+	NM_001128635	93234	+	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	126871	+	BC062565|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AJ000730|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC008814|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_004173|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC064805|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_001159554|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AB002058|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CR456535|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC109209|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013135|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013423|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK309079|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_005446|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC047287|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC063553|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC033488|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK096901|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##BC065749|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2	0.92641	CTCF.p2:4:0.926
chr4	140150733	140150861	reg1008924.p1	11.046	+	TSC_hg19_v1_chr4_-_140098351 AK311505	-52460	-	U43188 NM_201999	-90194	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	-145186	-	BC037987 BC104173 BC104174 AF329088 AF484960 NM_032623	50618	-	CR457005 AF047184 TSC_hg19_v1_chr4_-_140216970 AF047435 AK291147 BC101798 BC112061	66176	-	BC107682 NM_001184986 NM_001184991 NM_002494	71575	-	U43188|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_201999|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC037987|C4orf49|84709|chromosome 4 open reading frame 49##BC104173|C4orf49|84709|chromosome 4 open reading frame 49##BC104174|C4orf49|84709|chromosome 4 open reading frame 49##AF329088|C4orf49|84709|chromosome 4 open reading frame 49##AF484960|C4orf49|84709|chromosome 4 open reading frame 49##NM_032623|C4orf49|84709|chromosome 4 open reading frame 49##CR457005|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF047184|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF047435|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AK291147|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC101798|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC112061|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC107682|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184986|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184991|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_002494|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa	0.990862	CTCF.p2:3:0.991
chr9	122731518	122731636	reg1008641.p2	11.046	+	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	-599919	-	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-2264890	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	-2264963	+	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	610776	-	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	745140	-	AF176698 TSC_hg19_v1_chr9_-_123555558	823968	-	BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9##AF176698|FBXW2|26190|F-box and WD repeat domain containing 2	0.98381	CTCF.p2:0:0.984
chr11	2913419	2913533	reg1007876.p1	11.045	+	U22398 BC039188 NM_000076 NM_001122630 NM_001122631 TSC_hg19_v1_chr11_-_2907004 BC067842	-6482	-	AK123073 TSC_hg19_v1_chr11_-_2721223	-192251	-	BC007733 TSC_hg19_v1_chr11_-_2560881	-352629	-	TSC_hg19_v1_chr11_+_2920918 BC015571 NM_183233	7469	+	TSC_hg19_v1_chr11_+_2923507 NM_002555	10026	+	TSC_hg19_v1_chr11_+_2923528 AB012083 AF028738 AF059663 AF070479 AF037064	10060	+	U22398|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC039188|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_000076|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122630|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122631|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC067842|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##AK123073|KCNQ1OT1|10984|KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)##BC015571|SLC22A18|5002|solute carrier family 22, member 18##NM_183233|SLC22A18|5002|solute carrier family 22, member 18##NM_002555|SLC22A18|5002|solute carrier family 22, member 18##AB012083|SLC22A18|5002|solute carrier family 22, member 18##AF028738|SLC22A18|5002|solute carrier family 22, member 18##AF059663|SLC22A18|5002|solute carrier family 22, member 18##AF070479|SLC22A18|5002|solute carrier family 22, member 18##AF037064|SLC22A18|5002|solute carrier family 22, member 18	0.954503	CTCF.p2:-1:0.955
chr1	174186956	174187103	reg1011241.p1	11.045	+	AK095838 TSC_hg19_v1_chr1_+_174128676 AL157958	-58337	+	BC041888 NM_014857 TSC_hg19_v1_chr1_+_174128608	-58429	+	TSC_hg19_v1_chr1_-_173991524 AB007961	-195514	-	BC095532 NM_005684 CU688296 CU688298 BC067456 BC067457 BC067458 BC067459 BC067460 BC069460 HQ995526	230201	+	AB007940 NM_001243765	582005	+	NM_001243763 AL049701	656530	+	AK095838|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL157958|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC041888|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_014857|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC095532|GPR52|9293|G protein-coupled receptor 52##NM_005684|GPR52|9293|G protein-coupled receptor 52##BC067456|GPR52|9293|G protein-coupled receptor 52##BC067457|GPR52|9293|G protein-coupled receptor 52##BC067458|GPR52|9293|G protein-coupled receptor 52##BC067459|GPR52|9293|G protein-coupled receptor 52##BC067460|GPR52|9293|G protein-coupled receptor 52##BC069460|GPR52|9293|G protein-coupled receptor 52##HQ995526|GPR52|9293|G protein-coupled receptor 52##AB007940|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243765|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243763|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL049701|RABGAP1L|9910|RAB GTPase activating protein 1-like	0.088622	
chr12	3913146	3913277	reg1009193.p1	11.045	+	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-50829	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-50943	-	AK125333 TSC_hg19_v1_chr12_-_3601984	-311226	-	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	69289	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	469833	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	517180	+	AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5	1.835972	CTCF.p2:18:0.907	CTCF.p2:-95:0.872
chr4	171912240	171912366	reg1010267.p1	11.045	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-900889	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-901105	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-964798	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	822341	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	2177649	+	BC043556 TSC_hg19_v1_chr4_-_174090314	2178007	-	BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.010317	
chr6	53302498	53302634	reg1008473.p2	11.045	+	AK299674 AK302948 TSC_hg19_v1_chr6_-_53213749 AF338241 NM_001242828 NM_001242830 NM_001242831 NM_021814	-88705	-	TSC_hg19_v1_chr6_-_53213736 AB209798 AL136939 BC074503 BC067123	-88845	-	AK125098 TSC_hg19_v1_chr6_-_53213676	-88927	-	TSC_hg19_v1_chr6_-_53409483 AB516284 CU691792 CU692650 EU832317 EU832402	106900	-	TSC_hg19_v1_chr6_-_53409528 BC039894 M90656	106951	-	TSC_hg19_v1_chr6_-_53409821 AB262176 BC022487	107247	-	AK299674|ELOVL5|60481|ELOVL fatty acid elongase 5##AK302948|ELOVL5|60481|ELOVL fatty acid elongase 5##AF338241|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242828|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242830|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242831|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_021814|ELOVL5|60481|ELOVL fatty acid elongase 5##AB209798|ELOVL5|60481|ELOVL fatty acid elongase 5##AL136939|ELOVL5|60481|ELOVL fatty acid elongase 5##BC074503|ELOVL5|60481|ELOVL fatty acid elongase 5##BC067123|ELOVL5|60481|ELOVL fatty acid elongase 5##AK125098|ELOVL5|60481|ELOVL fatty acid elongase 5##AB516284|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EU832317|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EU832402|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC039894|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##M90656|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AB262176|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC022487|GCLC|2729|glutamate-cysteine ligase, catalytic subunit	0.431944	CTCF.p2:9:0.432
chr8	71747280	71747399	reg1009329.p1	11.044	+	AY534247 BC111381 NM_001011720 BC151845 BC137104 BC137105	-165699	+	TSC_hg19_v1_chr8_-_71581419 BC000878 BC008505 NM_016027	-165890	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	-165955	-	AF467247 BC121798 BC121799 AJ000097 NM_172058 NM_172059 NM_172060	521510	-	AK127798 AK295897 TSC_hg19_v1_chr8_-_72274006	526646	-	TSC_hg19_v1_chr8_-_72274302 AK307379	526954	-	AY534247|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC111381|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##NM_001011720|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC151845|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137104|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137105|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC000878|LACTB2|51110|lactamase, beta 2##BC008505|LACTB2|51110|lactamase, beta 2##NM_016027|LACTB2|51110|lactamase, beta 2##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2##AF467247|EYA1|2138|eyes absent homolog 1 (Drosophila)##BC121798|EYA1|2138|eyes absent homolog 1 (Drosophila)##BC121799|EYA1|2138|eyes absent homolog 1 (Drosophila)##AJ000097|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172058|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172059|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172060|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)	0.237928	CTCF.p2:5:0.238
chr12	6663371	6663490	reg1010433.p1	11.043	+	M36164 TSC_hg19_v1_chr12_+_6647482	-16013	+	TSC_hg19_v1_chr12_+_6643982 M17851 AY633612 BC023632 DQ891557 DQ894744 AB463693 CU679249 J02642 BT006893 CR407671	-19448	+	TSC_hg19_v1_chr12_+_6643683 AF261085 NM_002046 AK308198 AK299448 BC009081 BC013310 M33197 BC025925 BC029618 X53778 AB062273 AY007133 BC004109 BC083511 BC029340 BC001601 BC020308 BC026907	-19768	+	TSC_hg19_v1_chr12_-_6665250 BC001790 BC010431 BC023664 BC110387 NM_001039670 NM_001193457 NM_080730	1828	-	TSC_hg19_v1_chr12_-_6677453 BC000656 BC065257 AK129852 BC106072 BC082985 BC128183 BC128184 AK056208 AK307582 NM_001033714 NM_006170	14036	-	CR936680 EU446505 TSC_hg19_v1_chr12_-_6715604	52138	-	M36164|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##M17851|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AY633612|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC023632|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##DQ891557|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##DQ894744|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##J02642|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BT006893|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##CR407671|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AF261085|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##NM_002046|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AK308198|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AK299448|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC009081|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC013310|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##M33197|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC025925|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC029618|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##X53778|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AB062273|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AY007133|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC004109|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC083511|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC029340|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC001601|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC020308|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC026907|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC001790|IFFO1|25900|intermediate filament family orphan 1##BC010431|IFFO1|25900|intermediate filament family orphan 1##BC023664|IFFO1|25900|intermediate filament family orphan 1##BC110387|IFFO1|25900|intermediate filament family orphan 1##NM_001039670|IFFO1|25900|intermediate filament family orphan 1##NM_001193457|IFFO1|25900|intermediate filament family orphan 1##NM_080730|IFFO1|25900|intermediate filament family orphan 1##BC000656|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC065257|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK129852|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC106072|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC082985|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC128183|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC128184|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK056208|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK307582|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##NM_001033714|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##NM_006170|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##CR936680|CHD4|1108|chromodomain helicase DNA binding protein 4##EU446505|CHD4|1108|chromodomain helicase DNA binding protein 4	0.1208	
chr1	76796818	76796925	reg1008266.p1	11.043	+	TSC_hg19_v1_chr1_+_76540430 NM_001160011 NM_152996 AK091215 AX746855 BC059363 AK297363 AY358540 AJ507291 CU691350	-256409	+	AF403035 CU691378 BC022517 AF429968 BC036573 AK098606 NM_080868	-398826	-	NM_002440 BC033030 U89293 AF104243 AB528458 CU689598 DQ891259 DQ894445	-534259	+	TSC_hg19_v1_chr1_+_77165439 D28460	368569	+	TSC_hg19_v1_chr1_+_77333125 AK056241	536256	+	TSC_hg19_v1_chr1_+_77333164 AK095758 AK300902 AK295019 BC001201 NM_030965	536300	+	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17##AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17##AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_002440|MSH4|4438|mutS homolog 4 (E. coli)##BC033030|MSH4|4438|mutS homolog 4 (E. coli)##U89293|MSH4|4438|mutS homolog 4 (E. coli)##AF104243|MSH4|4438|mutS homolog 4 (E. coli)##DQ891259|MSH4|4438|mutS homolog 4 (E. coli)##DQ894445|MSH4|4438|mutS homolog 4 (E. coli)##D28460|TPI1|7167|triosephosphate isomerase 1##AK056241|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK095758|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK300902|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK295019|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##BC001201|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##NM_030965|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	0.902121	CTCF.p2:5:0.902
chr9	46861937	46862052	reg1010445.p1	11.043	+	TSC_hg19_v1_chr9_+_45441926 BC006438	-1420068	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-3177151	+	NM_001145196	-3231265	-	BC040528 NM_001113541 NM_015667	18647615	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	19595307	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	19596502	-	BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.93719	CTCF.p2:-1:0.937
chr11	119884075	119884198	reg1009239.p2	11.042	+	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	-284754	-	BC037832 NM_006288	-589893	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-590227	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	115410	-	AK299472 TSC_hg19_v1_chr11_-_120008323	124136	-	AB464321 CU675956 EU446943 TSC_hg19_v1_chr11_-_120008772	124619	-	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29##EU446943|TRIM29|23650|tripartite motif containing 29	0.0	
chr6	35295350	35295470	reg1009636.p1	11.042	+	TSC_hg19_v1_chr6_+_35265672 BC007702	-29743	+	AK093613 AY241694 NM_022047 TSC_hg19_v1_chr6_+_35265594 AK314756 BC017504 AB527549 AJ276095	-29796	+	TSC_hg19_v1_chr6_+_35227490 AK294605 BC002549 NM_003427 BC000133 M91592	-67883	+	TSC_hg19_v1_chr6_+_35310334 NM_001171818 NM_001171819 NM_001171820 NM_006238 NM_177435	14916	+	TSC_hg19_v1_chr6_+_35310339 AK122614	14929	+	TSC_hg19_v1_chr6_+_35310375 AK304878 AB099507 AK296425 AK291661 BC002715 BC007578	14966	+	BC007702|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AK093613|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AY241694|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##NM_022047|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AK314756|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##BC017504|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AJ276095|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AK294605|ZNF76|7629|zinc finger protein 76##BC002549|ZNF76|7629|zinc finger protein 76##NM_003427|ZNF76|7629|zinc finger protein 76##BC000133|ZNF76|7629|zinc finger protein 76##M91592|ZNF76|7629|zinc finger protein 76##NM_001171818|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_001171819|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_001171820|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_006238|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_177435|PPARD|5467|peroxisome proliferator-activated receptor delta##AK122614|PPARD|5467|peroxisome proliferator-activated receptor delta##AK304878|PPARD|5467|peroxisome proliferator-activated receptor delta##AB099507|PPARD|5467|peroxisome proliferator-activated receptor delta##AK296425|PPARD|5467|peroxisome proliferator-activated receptor delta##AK291661|PPARD|5467|peroxisome proliferator-activated receptor delta##BC002715|PPARD|5467|peroxisome proliferator-activated receptor delta##BC007578|PPARD|5467|peroxisome proliferator-activated receptor delta	0.90534	CTCF.p2:11:0.905
chr8	72687388	72687502	reg1007892.p2	11.042	+	BC035138 BC048982 TSC_hg19_v1_chr8_-_72459928	-227536	-	AJ000098 NM_000503 TSC_hg19_v1_chr8_-_72274481	-412970	-	TSC_hg19_v1_chr8_-_72274302 AK307379	-413152	-	TSC_hg19_v1_chr8_+_72756330 AK123315 BC094782	68829	+	TSC_hg19_v1_chr8_+_72756336 BX647470	68895	+	TSC_hg19_v1_chr8_-_72756449 AF087036 AB463900 BT007169	68994	-	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK123315|LOC100132891|100132891|uncharacterized LOC100132891##AF087036|MSC|9242|musculin##BT007169|MSC|9242|musculin	0.992367	CTCF.p2:-1:0.992
chr15	56541436	56541532	reg1008226.p1	11.041	+	TSC_hg19_v1_chr15_-_56535479 NM_022841	-6002	-	TSC_hg19_v1_chr15_-_56388663 AL832584	-152787	-	TSC_hg19_v1_chr15_-_56285776 BC035707 AK304394 AY550969 BC152452 BC152562 D42055 NM_006154	-255689	-	TSC_hg19_v1_chr15_+_56657623 AK294960 BC028119 NM_198524 AL832050	116145	+	TSC_hg19_v1_chr15_-_56757262 BC031046 AK310029 BC012554 BC034991 AK002084 NM_018365	215802	-	TSC_hg19_v1_chr15_-_57025690 AB046804 BC053649 BC064359 AK310882 AK289739 BC130451 BC136412	484228	-	NM_022841|RFX7|64864|regulatory factor X, 7##AL832584|RFX7|64864|regulatory factor X, 7##BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK294960|TEX9|374618|testis expressed 9##BC028119|TEX9|374618|testis expressed 9##NM_198524|TEX9|374618|testis expressed 9##AL832050|TEX9|374618|testis expressed 9##BC031046|MNS1|55329|meiosis-specific nuclear structural 1##BC012554|MNS1|55329|meiosis-specific nuclear structural 1##BC034991|MNS1|55329|meiosis-specific nuclear structural 1##AK002084|MNS1|55329|meiosis-specific nuclear structural 1##NM_018365|MNS1|55329|meiosis-specific nuclear structural 1##AB046804|ZNF280D|54816|zinc finger protein 280D##BC053649|ZNF280D|54816|zinc finger protein 280D##BC064359|ZNF280D|54816|zinc finger protein 280D##AK310882|ZNF280D|54816|zinc finger protein 280D##AK289739|ZNF280D|54816|zinc finger protein 280D##BC130451|ZNF280D|54816|zinc finger protein 280D##BC136412|ZNF280D|54816|zinc finger protein 280D	0.893459	CTCF.p2:-5:0.893
chr3	50159105	50159250	reg1010407.p2	11.041	+	TSC_hg19_v1_chr3_+_50126425 U23946	-32742	+	TSC_hg19_v1_chr3_+_50126354 AF091263 AK297249 AK302766 AK297445 AK314032 BC002957 AB208813 AF103802 AF107493 AB586690	-32797	+	NM_005778 TSC_hg19_v1_chr3_+_50126351	-32832	+	TSC_hg19_v1_chr3_+_50192514 AB209259	33320	+	BC042914 NM_004186 U33920	33729	+	DQ426874 NM_000172 NM_144499 X15088 BC095505 AF493908	69913	+	U23946|RBM5|10181|RNA binding motif protein 5##AF091263|RBM5|10181|RNA binding motif protein 5##AK297249|RBM5|10181|RNA binding motif protein 5##AK302766|RBM5|10181|RNA binding motif protein 5##AK297445|RBM5|10181|RNA binding motif protein 5##AK314032|RBM5|10181|RNA binding motif protein 5##BC002957|RBM5|10181|RNA binding motif protein 5##AB208813|RBM5|10181|RNA binding motif protein 5##AF103802|RBM5|10181|RNA binding motif protein 5##AF107493|RBM5|10181|RNA binding motif protein 5##AB586690|RBM5|10181|RNA binding motif protein 5##NM_005778|RBM5|10181|RNA binding motif protein 5##AB209259|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##BC042914|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##NM_004186|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##U33920|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##NM_000172|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##NM_144499|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##X15088|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##BC095505|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##AF493908|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1	0.999962	CTCF.p2:-14:1.000
chr5	126777884	126778043	reg1008441.p1	11.041	+	NM_032446 CR749437 AK307919 BC020198 AB058676 BC152478	-151429	+	AK126569 NM_001164478 NM_001164479	-368786	-	NM_178450	-411524	-	NM_130809 TSC_hg19_v1_chr5_+_126853331 AL831963 AL832056 AL832600 AJ427339 AJ441110 AJ496322 AJ515158 AJ515428 AJ515429 AK057437 BC017066	75388	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	81231	+	NM_001048252 AB219764	206760	+	NM_032446|MEGF10|84466|multiple EGF-like-domains 10##CR749437|MEGF10|84466|multiple EGF-like-domains 10##AK307919|MEGF10|84466|multiple EGF-like-domains 10##BC020198|MEGF10|84466|multiple EGF-like-domains 10##AB058676|MEGF10|84466|multiple EGF-like-domains 10##BC152478|MEGF10|84466|multiple EGF-like-domains 10##AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63##NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##NM_130809|PRRC1|133619|proline-rich coiled-coil 1##AL831963|PRRC1|133619|proline-rich coiled-coil 1##AL832056|PRRC1|133619|proline-rich coiled-coil 1##AL832600|PRRC1|133619|proline-rich coiled-coil 1##AJ427339|PRRC1|133619|proline-rich coiled-coil 1##AJ441110|PRRC1|133619|proline-rich coiled-coil 1##AJ496322|PRRC1|133619|proline-rich coiled-coil 1##AJ515158|PRRC1|133619|proline-rich coiled-coil 1##AJ515428|PRRC1|133619|proline-rich coiled-coil 1##AJ515429|PRRC1|133619|proline-rich coiled-coil 1##AK057437|PRRC1|133619|proline-rich coiled-coil 1##BC017066|PRRC1|133619|proline-rich coiled-coil 1##AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1##NM_001048252|CTXN3|613212|cortexin 3##AB219764|CTXN3|613212|cortexin 3	0.807435	CTCF.p2:23:0.807
chrX	155246487	155246617	reg1010862.p1	11.041	+	M84747 NM_002186 AK303178 BC025298 BC051337 S71404 CU690808	-19211	+	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	-135561	+	AK289543 AK311508 NM_005840 AK125483	-249118	+	None	None	None	None	None	None	None	None	None	M84747|IL9R|3581|interleukin 9 receptor##NM_002186|IL9R|3581|interleukin 9 receptor##AK303178|IL9R|3581|interleukin 9 receptor##BC025298|IL9R|3581|interleukin 9 receptor##BC051337|IL9R|3581|interleukin 9 receptor##S71404|IL9R|3581|interleukin 9 receptor##NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7##AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)	0.637007	CTCF.p2:11:0.637
chr22	43364075	43364207	reg1006123.p2	11.040	+	AL136845 NM_001184971	-8255	-	BC008037 NM_007229	-21095	-	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-110786	-	TSC_hg19_v1_chr22_-_43411136 AF128536	46998	-	TSC_hg19_v1_chr22_-_43411156 NM_001184970	47036	-	TSC_hg19_v1_chr22_-_43485410 AF104927 AF173935 AK315658 BC009058 AK095996 BC014968 AL136687 NM_012263	121246	-	AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184970|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF104927|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AF173935|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK315658|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC009058|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK095996|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC014968|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AL136687|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_012263|TTLL1|25809|tubulin tyrosine ligase-like family, member 1	0.251546	CTCF.p2:3:0.252
chr10	86300371	86300526	reg1008749.p1	11.039	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-115753	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-168830	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-212054	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	1825815	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	1981046	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	1981082	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.0	
chr12	57852982	57853114	reg1008495.p2	11.039	+	TSC_hg19_v1_chr12_+_57849089 NM_031479 AK075285 BC005161 AF412024	-3950	+	TSC_hg19_v1_chr12_+_57828511 AK314849 BC020693 NM_005538 X82540 BC130324 BC130326 AB590801	-24485	+	AB023219 AX775761 AX775763 TSC_hg19_v1_chr12_-_57824797	-28236	-	AK297899 NM_001160045 NM_001167609 NM_005269 X07384 AB239135 AB239136	894	+	AK301095 AK057573 AB030239 NM_001080156	18631	-	TSC_hg19_v1_chr12_-_57873391 AK092763 AX747713 NM_001080157	20346	-	NM_031479|INHBE|83729|inhibin, beta E##AK075285|INHBE|83729|inhibin, beta E##BC005161|INHBE|83729|inhibin, beta E##AF412024|INHBE|83729|inhibin, beta E##AK314849|INHBC|3626|inhibin, beta C##BC020693|INHBC|3626|inhibin, beta C##NM_005538|INHBC|3626|inhibin, beta C##BC130324|INHBC|3626|inhibin, beta C##BC130326|INHBC|3626|inhibin, beta C##AB023219|R3HDM2|22864|R3H domain containing 2##AX775761|R3HDM2|22864|R3H domain containing 2##AX775763|R3HDM2|22864|R3H domain containing 2##AK297899|GLI1|2735|GLI family zinc finger 1##NM_001160045|GLI1|2735|GLI family zinc finger 1##NM_001167609|GLI1|2735|GLI family zinc finger 1##NM_005269|GLI1|2735|GLI family zinc finger 1##X07384|GLI1|2735|GLI family zinc finger 1##AB239135|GLI1|2735|GLI family zinc finger 1##AB239136|GLI1|2735|GLI family zinc finger 1##AK301095|ARHGAP9|64333|Rho GTPase activating protein 9##AK057573|ARHGAP9|64333|Rho GTPase activating protein 9##AB030239|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080156|ARHGAP9|64333|Rho GTPase activating protein 9##AK092763|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9	0.987551	CTCF.p2:4:0.988
chr14	104447103	104447224	reg1008945.p2	11.039	+	TSC_hg19_v1_chr14_+_104394792 NM_153046	-52380	+	AK310120 TSC_hg19_v1_chr14_-_104387867 AK309355 AK312099 AF054175 AK309499 DQ426862 NM_001127393 NM_004894	-59284	-	BX161388 TSC_hg19_v1_chr14_-_104387847 BC047289 BC063419 BC000429 BC001944	-59318	-	AX781433 BX247999 NM_001080464 AX721044 BC035836 BC136637 AX781428 AX781429 AX781430 AX781431 AX781435	104898	+	NM_015656	157896	+	TSC_hg19_v1_chr14_+_104605441 AB033062	158289	+	NM_153046|TDRD9|122402|tudor domain containing 9##AK310120|C14orf2|9556|chromosome 14 open reading frame 2##AK309355|C14orf2|9556|chromosome 14 open reading frame 2##AK312099|C14orf2|9556|chromosome 14 open reading frame 2##AF054175|C14orf2|9556|chromosome 14 open reading frame 2##AK309499|C14orf2|9556|chromosome 14 open reading frame 2##DQ426862|C14orf2|9556|chromosome 14 open reading frame 2##NM_001127393|C14orf2|9556|chromosome 14 open reading frame 2##NM_004894|C14orf2|9556|chromosome 14 open reading frame 2##BX161388|C14orf2|9556|chromosome 14 open reading frame 2##BC047289|C14orf2|9556|chromosome 14 open reading frame 2##BC063419|C14orf2|9556|chromosome 14 open reading frame 2##BC000429|C14orf2|9556|chromosome 14 open reading frame 2##BC001944|C14orf2|9556|chromosome 14 open reading frame 2##AX781433|ASPG|374569|asparaginase homolog (S. cerevisiae)##BX247999|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_001080464|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC035836|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC136637|ASPG|374569|asparaginase homolog (S. cerevisiae)##AX781435|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_015656|KIF26A|26153|kinesin family member 26A##AB033062|KIF26A|26153|kinesin family member 26A	0.830069	CTCF.p2:0:0.830
chr16	55292008	55292103	reg1007530.p1	11.039	+	AY335945 BC131510 NM_001252197 NM_005853	-326945	+	AF275804 TSC_hg19_v1_chr16_-_54962719	-329340	-	TSC_hg19_v1_chr16_-_54320368 AY335943 NM_024336	-971662	-	AY335937 NM_024335	66415	+	TSC_hg19_v1_chr16_+_55513109 NM_004530 X58968 AK312711 BC002576 DQ891952 DQ895138 AB385158 CU678050 J03210	221065	+	AK310314 NM_001127891	223415	+	AY335945|IRX5|10265|iroquois homeobox 5##BC131510|IRX5|10265|iroquois homeobox 5##NM_001252197|IRX5|10265|iroquois homeobox 5##NM_005853|IRX5|10265|iroquois homeobox 5##AF275804|CRNDE|643911|colorectal neoplasia differentially expressed (non-protein coding)##AY335943|IRX3|79191|iroquois homeobox 3##NM_024336|IRX3|79191|iroquois homeobox 3##AY335937|IRX6|79190|iroquois homeobox 6##NM_024335|IRX6|79190|iroquois homeobox 6##NM_004530|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##X58968|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##AK312711|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##BC002576|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##DQ891952|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##DQ895138|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##J03210|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##AK310314|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##NM_001127891|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	0.37088	CTCF.p2:15:0.371
chr7	104559151	104559267	reg1006927.p2	11.039	+	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-589991	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-710778	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-929213	-	TSC_hg19_v1_chr7_-_104567089 BC050337	7881	-	TSC_hg19_v1_chr7_-_104653491 AK124046	94273	-	TSC_hg19_v1_chr7_-_104654062 AK094372	94865	-	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##BC050337|LOC723809|723809|uncharacterized LOC723809##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545	0.969538	CTCF.p2:26:0.970
chr6	159393523	159393651	reg1007852.p2	11.038	+	NM_001195032	-83969	+	TSC_hg19_v1_chr6_-_159240446 NM_001111077	-153131	-	TSC_hg19_v1_chr6_-_159240401 AK296738	-153174	-	TSC_hg19_v1_chr6_-_159420766 BC035675	27182	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	27232	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	27634	-	NM_001195032|C6orf99|100130967|chromosome 6 open reading frame 99##NM_001111077|EZR|7430|ezrin##AK296738|EZR|7430|ezrin##BC035675|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)	0.966068	CTCF.p2:26:0.966
chr9	15533381	15533503	reg1008386.p2	11.038	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-22482	-	AF098483 AF098482 NM_021144	-23195	-	TSC_hg19_v1_chr9_+_15422877 AB527501 EU446705 BC014985	-110530	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	19579	+	TSC_hg19_v1_chr9_-_16727889 AY438376	1194455	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	1337225	-	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2	0.187583	
chr9	93633433	93633569	reg1010599.p1	11.038	+	NM_001174167 X73568	-43768	+	TSC_hg19_v1_chr9_+_93564206 NM_001174168 BC011399	-69286	+	TSC_hg19_v1_chr9_+_93564100 AK290927	-69386	+	TSC_hg19_v1_chr9_-_94124185 AB528075 AM393420 CU676666 DQ892036 DQ895227 X79888 AK302453	490669	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	490698	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	552543	-	NM_001174167|SYK|6850|spleen tyrosine kinase##X73568|SYK|6850|spleen tyrosine kinase##NM_001174168|SYK|6850|spleen tyrosine kinase##BC011399|SYK|6850|spleen tyrosine kinase##AK290927|SYK|6850|spleen tyrosine kinase##AM393420|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ892036|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ895227|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##X79888|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK302453|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated	0.873262	CTCF.p2:4:0.873
chr8	136478225	136478346	reg1011096.p1	11.036	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-8084	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-8627	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-753011	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	3030821	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	3447959	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	4236997	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.998022	CTCF.p2:4:0.998
chr10	98402860	98402992	reg1010336.p1	11.035	+	TSC_hg19_v1_chr10_-_98346798 AF269150 BC136788 BC136789 BC144412 NM_020123	-56103	-	TSC_hg19_v1_chr10_-_98346770 AK314348	-56148	-	TSC_hg19_v1_chr10_-_98346739 AF160213	-56254	-	BX648550 TSC_hg19_v1_chr10_-_98480272 AK125635 NM_152309	77315	-	TSC_hg19_v1_chr10_+_98592020 NM_001170765 NM_001170766 AL832106 AK308356 BC053359	189127	+	TSC_hg19_v1_chr10_-_98592186 AB593180	189274	-	AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3##BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3##AK314348|TM9SF3|56889|transmembrane 9 superfamily member 3##AF160213|TM9SF3|56889|transmembrane 9 superfamily member 3##BX648550|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AK125635|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_152309|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor##AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor##BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor	0.0	
chr2	224835137	224835261	reg1008921.p2	11.035	+	TSC_hg19_v1_chr2_+_224822174 NM_022915 AK022763 BC012058 AK024052 CR457293 CU680184	-13046	+	TSC_hg19_v1_chr2_-_224810053 BC065934 NM_020830 AJ310568	-25134	-	TSC_hg19_v1_chr2_-_224810031 BC021065	-25167	-	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	31429	-	AK295564 NM_001136530	68141	-	TSC_hg19_v1_chr2_-_224904004 BC015663 AK225823 AK297588 AK312499 NM_001136528 NM_006216	68971	-	NM_022915|MRPL44|65080|mitochondrial ribosomal protein L44##AK022763|MRPL44|65080|mitochondrial ribosomal protein L44##BC012058|MRPL44|65080|mitochondrial ribosomal protein L44##AK024052|MRPL44|65080|mitochondrial ribosomal protein L44##CR457293|MRPL44|65080|mitochondrial ribosomal protein L44##BC065934|WDFY1|57590|WD repeat and FYVE domain containing 1##NM_020830|WDFY1|57590|WD repeat and FYVE domain containing 1##AJ310568|WDFY1|57590|WD repeat and FYVE domain containing 1##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##BC015663|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK225823|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK297588|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK312499|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136528|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_006216|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	0.995111	CTCF.p2:-9:0.995
chr3	32338334	32338462	reg1007928.p1	11.035	+	TSC_hg19_v1_chr3_+_32280215 BC041390	-58179	+	TSC_hg19_v1_chr3_+_32280171 AF474370 AY598783 NM_178868	-58233	+	TSC_hg19_v1_chr3_+_32148151 BC028726 AK292808 AB385275	-190230	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	94771	+	TSC_hg19_v1_chr3_+_32433370 BC010116 AY174113 DQ132881 AK308878	95005	+	CR457231 TSC_hg19_v1_chr3_-_32544290	205874	-	BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AF474370|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AY598783|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##NM_178868|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##BC028726|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AK292808|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##BC010116|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AY174113|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##DQ132881|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AK308878|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##CR457231|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6	0.999894	CTCF.p2:-12:1.000
chr11	17251780	17251928	reg1009483.p1	11.034	+	TSC_hg19_v1_chr11_-_17229534 AK309610 AK299474 AK304262 BC040952 BC031681 AK294416 BC035982 AK310248	-22357	-	Y13367 AB385161 HQ258691 BC113658 NM_002645	-60534	-	X79239 AB528349 CU688732 TSC_hg19_v1_chr11_-_17099216 DQ891107 DQ894288 BC000475 BC029732 BC100032 BC006772 AK312060 BC066322 D28429 L01124 NM_001017	-152615	-	TSC_hg19_v1_chr11_+_17298285 EU039832 EU039833 NM_005013 X76732 BC111556 AF450266	46459	+	TSC_hg19_v1_chr11_+_17332454 BC172867	80629	+	TSC_hg19_v1_chr11_+_17373346 CR749521 NM_001202439 BX537685 BC136797 BC136800	121487	+	AK309610|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK299474|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK304262|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##BC040952|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##BC031681|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK294416|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK310248|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##Y13367|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##HQ258691|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##BC113658|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##NM_002645|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##X79239|RPS13|6207|ribosomal protein S13##DQ891107|RPS13|6207|ribosomal protein S13##DQ894288|RPS13|6207|ribosomal protein S13##BC000475|RPS13|6207|ribosomal protein S13##BC029732|RPS13|6207|ribosomal protein S13##BC100032|RPS13|6207|ribosomal protein S13##BC006772|RPS13|6207|ribosomal protein S13##AK312060|RPS13|6207|ribosomal protein S13##BC066322|RPS13|6207|ribosomal protein S13##L01124|RPS13|6207|ribosomal protein S13##NM_001017|RPS13|6207|ribosomal protein S13##EU039832|NUCB2|4925|nucleobindin 2##EU039833|NUCB2|4925|nucleobindin 2##NM_005013|NUCB2|4925|nucleobindin 2##X76732|NUCB2|4925|nucleobindin 2##BC111556|NUCB2|4925|nucleobindin 2##AF450266|NUCB2|4925|nucleobindin 2##CR749521|B7H6|374383|B7 homolog 6##NM_001202439|B7H6|374383|B7 homolog 6##BX537685|B7H6|374383|B7 homolog 6##BC136797|B7H6|374383|B7 homolog 6##BC136800|B7H6|374383|B7 homolog 6	0.962173	CTCF.p2:-31:0.962
chr2	201336136	201336275	reg1008369.p1	11.034	+	TSC_hg19_v1_chr2_+_201171424 AF193059 BC065817	-164756	+	AL110124 AY450394 AK090867 TSC_hg19_v1_chr2_+_201171276 NM_001100422 NM_001100424 AK002064 AK090703 AK314561 BC010848 BC018736 NM_001100423	-165106	+	NM_015535 AK290496	-165596	+	TSC_hg19_v1_chr2_-_201374792 BC059366 BC045189 AK290867 BC067755 AK055884 NM_152387	38627	-	TSC_hg19_v1_chr2_+_201390929 NM_001160033 NM_001160046 NM_152524 AK095291 BC048349 BC110583 BX647433 AK302457 BC092412 AY094614	54697	+	TSC_hg19_v1_chr2_+_201450590 AK301052	114382	+	AF193059|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC065817|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC059366|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC045189|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK290867|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC067755|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK055884|KCTD18|130535|potassium channel tetramerisation domain containing 18##NM_152387|KCTD18|130535|potassium channel tetramerisation domain containing 18##NM_001160033|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_001160046|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_152524|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK095291|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC048349|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC110583|SGOL2|151246|shugoshin-like 2 (S. pombe)##BX647433|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK302457|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC092412|SGOL2|151246|shugoshin-like 2 (S. pombe)##AY094614|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK301052|AOX1|316|aldehyde oxidase 1	0.970323	CTCF.p2:6:0.970
chr3	57029586	57029729	reg1009157.p1	11.033	+	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	-193746	-	AK293864 AB209661 NM_001128616	-219988	-	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-312450	-	AY221117 NM_181727 BC126274 BC136498	64846	+	AF433662 AK302493 NM_001128615	83656	-	AF458067 TSC_hg19_v1_chr3_-_57199347	169676	-	AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12##AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF458067|IL17RD|54756|interleukin 17 receptor D	0.926677	CTCF.p2:-33:0.927
chr4	88014791	88014933	reg1008662.p1	11.033	+	TSC_hg19_v1_chr4_+_87968211 AF177238 AF177239	-46611	+	TSC_hg19_v1_chr4_+_87928422 L13773 BC114930 NM_005935 AK296243 L25050 AB385236	-86541	+	TSC_hg19_v1_chr4_+_87857481 L13743	-157379	+	BC041901 TSC_hg19_v1_chr4_-_88141661 BX640727 BX538173 NM_020803 CR749265 BX640744 BX647454 BC041384	126800	-	HQ258364 AY268355 BC112303 BC112305 AB073347 AK292784 AY186249 AY186250 NM_001136230 NM_178135 AY358575	229163	-	AB529195 CU690256 CU679009 AF273056 AY358553 TSC_hg19_v1_chr4_-_88312322 BC014327 BC021673	297409	-	AF177238|AFF1|4299|AF4/FMR2 family, member 1##AF177239|AFF1|4299|AF4/FMR2 family, member 1##L13773|AFF1|4299|AF4/FMR2 family, member 1##BC114930|AFF1|4299|AF4/FMR2 family, member 1##NM_005935|AFF1|4299|AF4/FMR2 family, member 1##AK296243|AFF1|4299|AF4/FMR2 family, member 1##L25050|AFF1|4299|AF4/FMR2 family, member 1##BC041901|KLHL8|57563|kelch-like 8 (Drosophila)##BX640727|KLHL8|57563|kelch-like 8 (Drosophila)##BX538173|KLHL8|57563|kelch-like 8 (Drosophila)##NM_020803|KLHL8|57563|kelch-like 8 (Drosophila)##CR749265|KLHL8|57563|kelch-like 8 (Drosophila)##BX640744|KLHL8|57563|kelch-like 8 (Drosophila)##BX647454|KLHL8|57563|kelch-like 8 (Drosophila)##BC041384|KLHL8|57563|kelch-like 8 (Drosophila)##HQ258364|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY268355|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112303|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112305|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AB073347|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AK292784|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186249|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186250|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_001136230|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_178135|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY358575|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	0.602427	CTCF.p2:22:0.602
chr9	125844233	125844370	reg1010785.p1	11.032	+	AB384939 BC066885 BC066886 BC067532 BC067533 BC067534 CU688178 NM_005294	-47456	+	AK294531 AK299686 TSC_hg19_v1_chr9_+_125795928 AK313539	-48434	+	AK131449 TSC_hg19_v1_chr9_+_125703299 BC020609 NM_012197 AK022408 BC054492 AF161357 AJ011679	-141073	+	TSC_hg19_v1_chr9_-_125874882 AK025814	30598	-	TSC_hg19_v1_chr9_-_125941308 BC002693	97019	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	186519	-	BC066885|GPR21|2844|G protein-coupled receptor 21##BC066886|GPR21|2844|G protein-coupled receptor 21##BC067532|GPR21|2844|G protein-coupled receptor 21##BC067533|GPR21|2844|G protein-coupled receptor 21##BC067534|GPR21|2844|G protein-coupled receptor 21##NM_005294|GPR21|2844|G protein-coupled receptor 21##AK294531|RABGAP1|23637|RAB GTPase activating protein 1##AK299686|GPR21|2844|G protein-coupled receptor 21##AK313539|GPR21|2844|G protein-coupled receptor 21##AK131449|RABGAP1|23637|RAB GTPase activating protein 1##BC020609|RABGAP1|23637|RAB GTPase activating protein 1##NM_012197|RABGAP1|23637|RAB GTPase activating protein 1##AK022408|RABGAP1|23637|RAB GTPase activating protein 1##BC054492|RABGAP1|23637|RAB GTPase activating protein 1##AF161357|RABGAP1|23637|RAB GTPase activating protein 1##AJ011679|RABGAP1|23637|RAB GTPase activating protein 1##AK025814|MIR600HG|81571|MIR600 host gene (non-protein coding)##BC002693|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein	0.212127	CTCF.p2:-2:0.212
chr22	22562328	22562473	reg1008286.p1	11.031	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	-12222	+	X02422 TSC_hg19_v1_chr22_+_22550141	-12271	+	TSC_hg19_v1_chr22_+_22385369 AF026922	-177035	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	6864	+	BC017922 NM_007128 CR456609 CU013205 CU013493 AB590106	36811	+	TSC_hg19_v1_chr22_+_22652513 BC033148 AK090629 AX746545 BX641141	90119	+	BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57##BC017922|VPREB1|7441|pre-B lymphocyte 1##NM_007128|VPREB1|7441|pre-B lymphocyte 1##CR456609|VPREB1|7441|pre-B lymphocyte 1##CU013205|VPREB1|7441|pre-B lymphocyte 1##CU013493|VPREB1|7441|pre-B lymphocyte 1##BC033148|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##AK090629|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##BX641141|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene	0.953481	CTCF.p2:-18:0.953
chr2	27473164	27473269	reg1008433.p2	11.031	+	TSC_hg19_v1_chr2_+_27440342 D78586 AB384768	-32837	+	TSC_hg19_v1_chr2_+_27440339 AB621827	-32893	+	TSC_hg19_v1_chr2_+_27440236 BC065510 NM_004341 AK226105	-32962	+	CU688460 DQ892115 DQ895310 U76010 TSC_hg19_v1_chr2_-_27485916 AK313600 BC028358 NM_003459	12670	-	AK097736 NM_173650 AK311597 BC035194 AK302239	25098	+	AK300699 NM_032546 NM_187841 AK311516	32082	+	D78586|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase##BC065510|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase##NM_004341|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase##AK226105|CAD|790|carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase##DQ892115|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##DQ895310|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##U76010|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##AK313600|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##BC028358|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##NM_003459|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##AK097736|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##NM_173650|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##BC035194|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##AK302239|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##AK300699|TRIM54|57159|tripartite motif containing 54##NM_032546|TRIM54|57159|tripartite motif containing 54##NM_187841|TRIM54|57159|tripartite motif containing 54	0.535942	CTCF.p2:-15:0.536
chr2	73120879	73120992	reg1004412.p3	11.031	+	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	-6405	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	-67831	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	-745993	-	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	23718	+	TSC_hg19_v1_chr2_-_73298414 AK024193	177501	-	TSC_hg19_v1_chr2_-_73298842 AL833454 AK314770 AK289731 AY044437 BC101311 BC101312 BC101313 NM_144579	177954	-	NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1##AK024193|SFXN5|94097|sideroflexin 5##AL833454|SFXN5|94097|sideroflexin 5##AK314770|SFXN5|94097|sideroflexin 5##AK289731|SFXN5|94097|sideroflexin 5##AY044437|SFXN5|94097|sideroflexin 5##BC101311|SFXN5|94097|sideroflexin 5##BC101312|SFXN5|94097|sideroflexin 5##BC101313|SFXN5|94097|sideroflexin 5##NM_144579|SFXN5|94097|sideroflexin 5	0.383877	CTCF.p2:0:0.384
chr19	53251713	53251840	reg1008920.p1	11.030	+	BC028590 AK091389 AX746954 NM_001161501 NM_001161499 NM_001161500	-13478	-	AK097434 NM_030972	-18642	-	TSC_hg19_v1_chr19_-_53193740 AK289399 AK075066 NM_001242531 NM_001242538	-57966	-	BX640933 AK131231 NM_198457	38248	-	CR933598 AK304704 BC070146 AK293074 NM_006969	73126	-	TSC_hg19_v1_chr19_-_53360854 AX721127 CR936599 AK292449 CR936695 AK289841 AY442330 AY442331 NM_001008801 NM_199132	109100	-	BC028590|ZNF611|81856|zinc finger protein 611##AK091389|ZNF611|81856|zinc finger protein 611##NM_001161501|ZNF611|81856|zinc finger protein 611##NM_001161499|ZNF611|81856|zinc finger protein 611##NM_001161500|ZNF611|81856|zinc finger protein 611##AK097434|ZNF611|81856|zinc finger protein 611##NM_030972|ZNF611|81856|zinc finger protein 611##AK289399|ZNF83|55769|zinc finger protein 83##AK075066|ZNF83|55769|zinc finger protein 83##NM_001242531|ZNF83|55769|zinc finger protein 83##NM_001242538|ZNF83|55769|zinc finger protein 83##BX640933|ZNF600|162966|zinc finger protein 600##AK131231|ZNF600|162966|zinc finger protein 600##NM_198457|ZNF600|162966|zinc finger protein 600##CR933598|ZNF28|7576|zinc finger protein 28##AK304704|ZNF28|7576|zinc finger protein 28##BC070146|ZNF28|7576|zinc finger protein 28##AK293074|ZNF28|7576|zinc finger protein 28##NM_006969|ZNF28|7576|zinc finger protein 28##CR936599|ZNF468|90333|zinc finger protein 468##AK292449|ZNF468|90333|zinc finger protein 468##CR936695|ZNF468|90333|zinc finger protein 468##AK289841|ZNF468|90333|zinc finger protein 468##AY442330|ZNF468|90333|zinc finger protein 468##AY442331|ZNF468|90333|zinc finger protein 468##NM_001008801|ZNF468|90333|zinc finger protein 468##NM_199132|ZNF468|90333|zinc finger protein 468	0.010999	
chr6	16332452	16332596	reg1010260.p2	11.030	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-93673	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-189214	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-203087	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	429173	-	NM_001190766	769964	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	949330	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.998044	CTCF.p2:-2:0.998
chr6	41149959	41150069	reg1008905.p1	11.030	+	NM_018965 TSC_hg19_v1_chr6_-_41130927 AB062787	-19071	-	TSC_hg19_v1_chr6_-_41130901 AK312215 AF213457	-19126	-	DQ891310 DQ894494 BC032362 BC018284 TSC_hg19_v1_chr6_-_41130855	-19176	-	AF534824 AK023755 BC125078 BC125079 AY358171 NM_024807	18909	-	AY358271 NM_198153 BC101780 BC105101 BC143652	46054	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	104410	-	NM_018965|TREM2|54209|triggering receptor expressed on myeloid cells 2##AB062787|TREM2|54209|triggering receptor expressed on myeloid cells 2##AK312215|TREM2|54209|triggering receptor expressed on myeloid cells 2##AF213457|TREM2|54209|triggering receptor expressed on myeloid cells 2##DQ891310|TREM2|54209|triggering receptor expressed on myeloid cells 2##DQ894494|TREM2|54209|triggering receptor expressed on myeloid cells 2##BC032362|TREM2|54209|triggering receptor expressed on myeloid cells 2##BC018284|TREM2|54209|triggering receptor expressed on myeloid cells 2##AF534824|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AK023755|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125078|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125079|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AY358171|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_024807|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1	0.992732	CTCF.p2:-2:0.651	CTCF.p2:-70:0.341
chr10	104263501	104263611	reg1008207.p1	11.029	+	CU674342 AM393135 DQ892689 DQ895934 AB462953 BC026016 TSC_hg19_v1_chr10_-_104262470 BC000693 Z14978 X82206 AK302072 AK312506 AK297362 AK297620 NM_005736	-1099	-	TSC_hg19_v1_chr10_+_104221184 AK301612 AY358808 NM_024789	-42374	+	TSC_hg19_v1_chr10_+_104221151 AK296583	-42406	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	163	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	263	+	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	140728	+	AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK301612|TMEM180|79847|transmembrane protein 180##AY358808|TMEM180|79847|transmembrane protein 180##NM_024789|TMEM180|79847|transmembrane protein 180##AK296583|TMEM180|79847|transmembrane protein 180##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8	0.262151	CTCF.p2:-2:0.262
chr1	186691989	186692105	reg1010326.p1	11.029	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-42557	-	M33478 NM_002597	-261820	-	AF076464 NM_022576	-274192	-	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	106041	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	3754688	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	5435556	+	AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AF076464|PDC|5132|phosducin##NM_022576|PDC|5132|phosducin##NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18	0.761099	CTCF.p2:-6:0.761
chr14	33029576	33029727	reg1010715.p1	11.029	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-231115	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-483145	+	TSC_hg19_v1_chr14_+_32546223 BC075799	-483406	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	378839	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	1390498	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	1901836	-	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A	0.0	
chr11	662832	662970	reg1011310.p1	11.028	+	TSC_hg19_v1_chr11_+_637268 EU432112 L12398 NM_000797 S76942	-25615	+	NM_021920	-35729	-	AF276242 AF301909 TSC_hg19_v1_chr11_-_624945 AY358368 BC038405 AK000226 AK300991 AK308040 AK309157 AK000384 NM_001171968 NM_021924 NM_031264 AF258678 AF258679	-37867	-	AB489172 AF068892 AF068893 AF068894 AF068895 AF068896 AF068897 AF007165 TSC_hg19_v1_chr11_-_694998	32019	-	TSC_hg19_v1_chr11_-_695046 AK289873 EU831436 EU831528	32127	-	TSC_hg19_v1_chr11_-_695070 AF049459	32196	-	EU432112|DRD4|1815|dopamine receptor D4##L12398|DRD4|1815|dopamine receptor D4##NM_000797|DRD4|1815|dopamine receptor D4##S76942|DRD4|1815|dopamine receptor D4##NM_021920|SCT|6343|secretin##AF276242|CDHR5|53841|cadherin-related family member 5##AF301909|CDHR5|53841|cadherin-related family member 5##AY358368|CDHR5|53841|cadherin-related family member 5##BC038405|CDHR5|53841|cadherin-related family member 5##AK000226|CDHR5|53841|cadherin-related family member 5##AK300991|CDHR5|53841|cadherin-related family member 5##AK308040|CDHR5|53841|cadherin-related family member 5##AK309157|CDHR5|53841|cadherin-related family member 5##AK000384|CDHR5|53841|cadherin-related family member 5##NM_001171968|CDHR5|53841|cadherin-related family member 5##NM_021924|CDHR5|53841|cadherin-related family member 5##NM_031264|CDHR5|53841|cadherin-related family member 5##AF258678|CDHR5|53841|cadherin-related family member 5##AF258679|CDHR5|53841|cadherin-related family member 5##AF068892|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068893|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068894|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068895|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068896|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068897|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF007165|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AK289873|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##EU831436|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##EU831528|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF049459|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)	1.23279	CTCF.p2:-17:0.818	CTCF.p2:36:0.414
chr14	105106415	105106546	reg1008289.p1	11.028	+	AB464314 AK124477 NM_207379	-35392	-	AK095913 NM_001008404 AK297818 AK309489 BC041103	-60394	+	TSC_hg19_v1_chr14_+_104605441 AB033062	-501028	+	TSC_hg19_v1_chr14_+_105147469 BC035345	40982	+	TSC_hg19_v1_chr14_+_105155954 NM_001031714 NM_022489 NM_032714 AK290083 BC006173 BX248757	49404	+	TSC_hg19_v1_chr14_+_105173955 DQ395338 DQ395339 DQ395340	67617	+	AK124477|TMEM179|388021|transmembrane protein 179##NM_207379|TMEM179|388021|transmembrane protein 179##AK095913|C14orf180|400258|chromosome 14 open reading frame 180##NM_001008404|C14orf180|400258|chromosome 14 open reading frame 180##AK297818|C14orf180|400258|chromosome 14 open reading frame 180##AK309489|C14orf180|400258|chromosome 14 open reading frame 180##BC041103|C14orf180|400258|chromosome 14 open reading frame 180##AB033062|KIF26A|26153|kinesin family member 26A##NM_001031714|INF2|64423|inverted formin, FH2 and WH2 domain containing##NM_022489|INF2|64423|inverted formin, FH2 and WH2 domain containing##NM_032714|INF2|64423|inverted formin, FH2 and WH2 domain containing##AK290083|INF2|64423|inverted formin, FH2 and WH2 domain containing##BC006173|INF2|64423|inverted formin, FH2 and WH2 domain containing##BX248757|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395338|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395339|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395340|INF2|64423|inverted formin, FH2 and WH2 domain containing	0.332273	CTCF.p2:10:0.332
chr4	4996974	4997102	reg1010658.p1	11.028	+	TSC_hg19_v1_chr4_+_4861391 NM_002448 AK290636 M97676 BC021285	-135640	+	TSC_hg19_v1_chr4_+_4543925 BC025734	-453154	+	TSC_hg19_v1_chr4_-_4543750 NM_016930	-453277	-	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	24108	-	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	56242	+	TSC_hg19_v1_chr4_+_5053464 AJ250839 NM_018401 BC038238 AB528925 DQ890554 DQ893714	56489	+	NM_002448|MSX1|4487|msh homeobox 1##AK290636|MSX1|4487|msh homeobox 1##M97676|MSX1|4487|msh homeobox 1##BC021285|MSX1|4487|msh homeobox 1##BC025734|LOC100507266|100507266|uncharacterized LOC100507266##NM_016930|STX18|53407|syntaxin 18##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B##AJ250839|STK32B|55351|serine/threonine kinase 32B##NM_018401|STK32B|55351|serine/threonine kinase 32B##BC038238|STK32B|55351|serine/threonine kinase 32B##DQ890554|STK32B|55351|serine/threonine kinase 32B##DQ893714|STK32B|55351|serine/threonine kinase 32B	0.990099	CTCF.p2:-14:0.990
chr9	130496963	130497095	reg1002728.p1	11.028	+	AK294862 BC031281 AK057342 AK302422 AK302737 NM_144965	-18680	+	HQ257888 TSC_hg19_v1_chr9_-_130477940 BC032117 BC047012 NM_001002913	-19087	-	AK094948 NM_001012502 BC141809	-27747	+	TSC_hg19_v1_chr9_-_130497605 BC080527 AK027677 BC100907 BC100908 BC100909 BC100910 AK075520 AK055034 AK092388 AX747514 AY358180 BC062340	549	-	TSC_hg19_v1_chr9_-_130497669 NM_001085347 NM_001134430 NM_001134431 NM_001252018 NM_001252021 NM_001252023 NM_130459	631	-	AK291393 TSC_hg19_v1_chr9_-_130517562 NM_001142534 AK056068 NM_001142533	20538	-	AK294862|TTC16|158248|tetratricopeptide repeat domain 16##BC031281|TTC16|158248|tetratricopeptide repeat domain 16##AK057342|TTC16|158248|tetratricopeptide repeat domain 16##AK302422|TTC16|158248|tetratricopeptide repeat domain 16##AK302737|TTC16|158248|tetratricopeptide repeat domain 16##NM_144965|TTC16|158248|tetratricopeptide repeat domain 16##HQ257888|PTRH1|138428|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)##BC047012|PTRH1|138428|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)##NM_001002913|PTRH1|138428|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)##AK094948|C9orf117|286207|chromosome 9 open reading frame 117##NM_001012502|C9orf117|286207|chromosome 9 open reading frame 117##BC141809|C9orf117|286207|chromosome 9 open reading frame 117##BC080527|TOR2A|27433|torsin family 2, member A##AK027677|TOR2A|27433|torsin family 2, member A##BC100907|TOR2A|27433|torsin family 2, member A##BC100908|TOR2A|27433|torsin family 2, member A##BC100909|TOR2A|27433|torsin family 2, member A##BC100910|TOR2A|27433|torsin family 2, member A##AK075520|TOR2A|27433|torsin family 2, member A##AK055034|TOR2A|27433|torsin family 2, member A##AK092388|TOR2A|27433|torsin family 2, member A##AY358180|TOR2A|27433|torsin family 2, member A##BC062340|TOR2A|27433|torsin family 2, member A##NM_001085347|TOR2A|27433|torsin family 2, member A##NM_001134430|TOR2A|27433|torsin family 2, member A##NM_001134431|TOR2A|27433|torsin family 2, member A##NM_001252018|TOR2A|27433|torsin family 2, member A##NM_001252021|TOR2A|27433|torsin family 2, member A##NM_001252023|TOR2A|27433|torsin family 2, member A##NM_130459|TOR2A|27433|torsin family 2, member A##AK291393|SH2D3C|10044|SH2 domain containing 3C##NM_001142534|SH2D3C|10044|SH2 domain containing 3C##AK056068|SH2D3C|10044|SH2 domain containing 3C##NM_001142533|SH2D3C|10044|SH2 domain containing 3C	0.151685	
chr19	15740236	15740364	reg1010587.p1	11.027	+	AK300530 AK300539 NM_007253 AK300478 AK096809 AK314685	-14271	+	NM_173483 AK096820	-120965	+	BC136551 BC136552 BC144238 AF384856 AY358156 TSC_hg19_v1_chr19_-_15590313 AK289415 AB073610 AK055882 NM_052890	-150041	-	AB002454 AK296761 AK296802 AK298675 AK316136 NM_000896 NM_001199208 NM_001199209 AK304200 BC136299 D12620 D12621	11423	+	NM_023944 AK304138 TSC_hg19_v1_chr19_+_15783896 AK304389 AK075435 AL832171 BC035350 AY358977 AB035130 AB035131	43572	+	BC112178 BC113647 NM_013939 HQ258140 BC069085 BC069457	98543	+	AK300530|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK300539|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##NM_007253|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK300478|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK096809|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK314685|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##NM_173483|CYP4F22|126410|cytochrome P450, family 4, subfamily F, polypeptide 22##AK096820|CYP4F22|126410|cytochrome P450, family 4, subfamily F, polypeptide 22##BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2##BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2##BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2##AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2##AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2##AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2##AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2##AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2##NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2##AB002454|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK296761|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK296802|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK298675|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK316136|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_000896|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_001199208|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_001199209|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK304200|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##BC136299|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##D12620|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##D12621|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_023944|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK304138|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK304389|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK075435|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AL832171|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##BC035350|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AY358977|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AB035130|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AB035131|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##BC112178|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2##BC113647|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2##NM_013939|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2##HQ258140|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2##BC069085|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2##BC069457|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2	0.999797	CTCF.p2:-11:1.000
chr3	145936820	145936941	reg1009815.p1	11.027	+	TSC_hg19_v1_chr3_-_145879223 NM_000935 NM_182943	-57629	-	TSC_hg19_v1_chr3_-_145878972 BC037169 AB209879	-57924	-	AB527423 U84573 AK295084 TSC_hg19_v1_chr3_-_145878818	-58073	-	AY550971 TSC_hg19_v1_chr3_-_145968931 AK128442 AK292815 AF199023 AL833760 AK312809	31995	-	TSC_hg19_v1_chr3_-_145968970 BC028354 NM_001128306 NM_001177304 NM_020353	32084	-	AK301909 NM_001199978	250207	-	NM_000935|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_182943|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##BC037169|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AB209879|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##U84573|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AK295084|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AY550971|PLSCR4|57088|phospholipid scramblase 4##AK128442|PLSCR4|57088|phospholipid scramblase 4##AK292815|PLSCR4|57088|phospholipid scramblase 4##AF199023|PLSCR4|57088|phospholipid scramblase 4##AL833760|PLSCR4|57088|phospholipid scramblase 4##AK312809|PLSCR4|57088|phospholipid scramblase 4##BC028354|PLSCR4|57088|phospholipid scramblase 4##NM_001128306|PLSCR4|57088|phospholipid scramblase 4##NM_001177304|PLSCR4|57088|phospholipid scramblase 4##NM_020353|PLSCR4|57088|phospholipid scramblase 4##AK301909|PLSCR2|57047|phospholipid scramblase 2##NM_001199978|PLSCR2|57047|phospholipid scramblase 2	0.993972	CTCF.p2:-2:0.994
chr15	83194722	83194831	reg1009151.p2	11.026	+	NM_198181 CR936812	-96035	+	CR936602 NM_001164465	-176598	-	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-249886	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	14460	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	45759	-	CU690752 BC050629 NM_030594	121898	-	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	0.799612	CTCF.p2:-4:0.800
chr19	45160618	45160741	reg1011002.p1	11.026	+	TSC_hg19_v1_chr19_+_45147209 AK300349 AK094177 BC015542	-13463	+	TSC_hg19_v1_chr19_+_45147180 AK290946	-13498	+	TSC_hg19_v1_chr19_+_45147159 NM_001135768 NM_001135769 NM_001135770 NM_006505	-13548	+	BC083499 NM_001127893 NM_020219	14044	+	BC144608 NM_001039213	41741	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	91302	+	AK300349|PVR|5817|poliovirus receptor##AK094177|PVR|5817|poliovirus receptor##BC015542|PVR|5817|poliovirus receptor##AK290946|PVR|5817|poliovirus receptor##NM_001135768|PVR|5817|poliovirus receptor##NM_001135769|PVR|5817|poliovirus receptor##NM_001135770|PVR|5817|poliovirus receptor##NM_006505|PVR|5817|poliovirus receptor##BC083499|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_001127893|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_020219|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3	1.470435	CTCF.p2:9:0.958	CTCF.p2:-42:0.512
chr20	37918115	37918210	reg1007128.p1	11.026	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-327173	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-363094	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-363173	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1399715	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1739332	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1739502	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.637412	CTCF.p2:-7:0.637
chr6_mann_hap4	2862161	2862285	reg1011747.p1	11.026	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.44778	CTCF.p2:-12:0.429
chr12	26182281	26182407	reg1011467.p1	11.025	+	AK290055 NM_001164747	-55657	+	TSC_hg19_v1_chr12_+_26111964 NM_001164748 NM_007211 BC030021 AB093206 AY665468 AY665469 AY665470 AY665471	-70343	+	AK296816 NM_001145727	-380857	-	NM_001164746 AK292333	23149	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	95577	-	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	165947	+	AK290055|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_001164747|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_001164748|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_007211|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##BC030021|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AB093206|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665468|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665469|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665470|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665471|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AK296816|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145727|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)	0.991893	CTCF.p2:1:0.992
chr13	111702733	111702881	reg1008258.p2	11.025	+	AK000100 NM_017664 TSC_hg19_v1_chr13_-_111567417	-135391	-	TSC_hg19_v1_chr13_-_111567375 BC001727 AK096083 BC039715	-135442	-	CU674848 CU691752 TSC_hg19_v1_chr13_-_111567293	-135520	-	TSC_hg19_v1_chr13_+_111767658 BC060776 NM_001113511 NM_001113512 NM_145735 BC033905 AL834228 CU687414 CU689800 EU832819 GQ129214	64922	+	AK300157 TSC_hg19_v1_chr13_+_111806035	103229	+	TSC_hg19_v1_chr13_+_111806041 AB177849 NM_003899	103244	+	AK000100|ANKRD10|55608|ankyrin repeat domain 10##NM_017664|ANKRD10|55608|ankyrin repeat domain 10##BC001727|ANKRD10|55608|ankyrin repeat domain 10##AK096083|ANKRD10|55608|ankyrin repeat domain 10##BC039715|ANKRD10|55608|ankyrin repeat domain 10##BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK300157|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AB177849|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_003899|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	0.999232	CTCF.p2:-6:0.999
chr3	14675465	14675579	reg1010653.p1	11.025	+	NM_001080423	-91935	-	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	-231406	+	TSC_hg19_v1_chr3_+_14444072 AK303649	-231453	+	TSC_hg19_v1_chr3_+_14693268 NM_016474 AK091158 AX746816 BC005199 BC033897 BC013999	17736	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	17761	+	NM_001184957 NM_001184958 NM_032137 AK131481 BC030599 AL834386 AL136781 BC038406	41123	+	NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2##NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_016474|C3orf19|51244|chromosome 3 open reading frame 19##AK091158|C3orf19|51244|chromosome 3 open reading frame 19##BC005199|C3orf19|51244|chromosome 3 open reading frame 19##BC033897|C3orf19|51244|chromosome 3 open reading frame 19##BC013999|C3orf19|51244|chromosome 3 open reading frame 19##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19##NM_001184957|C3orf20|84077|chromosome 3 open reading frame 20##NM_001184958|C3orf20|84077|chromosome 3 open reading frame 20##NM_032137|C3orf20|84077|chromosome 3 open reading frame 20##AK131481|C3orf20|84077|chromosome 3 open reading frame 20##BC030599|C3orf20|84077|chromosome 3 open reading frame 20##AL834386|C3orf20|84077|chromosome 3 open reading frame 20##AL136781|C3orf20|84077|chromosome 3 open reading frame 20##BC038406|C3orf20|84077|chromosome 3 open reading frame 20	0.743841	CTCF.p2:-4:0.744
chr10	22839807	22839939	reg1008687.p2	11.024	+	TSC_hg19_v1_chr10_+_22726003 AK295718	-113874	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-205417	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-229708	+	AK294817 TSC_hg19_v1_chr10_-_23003038	163164	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	163617	-	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	377108	+	AK295718|LOC100289455|100289455|uncharacterized LOC100289455##NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3	0.969192	CTCF.p2:0:0.969
chr11	67157031	67157157	reg1010606.p1	11.022	+	AK298052 NM_001166212	-15447	-	DQ891525 DQ894715 AB528390 AY049779 BC066229 BC066230 BC066231 AF172854 BC012939 AF176911 NM_013246	-15988	-	AF179890 BC001334 TSC_hg19_v1_chr11_-_67121006 BC070250 AB209274 NM_021173	-36090	-	TSC_hg19_v1_chr11_+_67159464 BC014848 NM_004584 U53174 AK315348 CR536508	2374	+	NM_001243224	3681	+	BT006629 AB464100 S57501 TSC_hg19_v1_chr11_-_67169297 AK313586 X70848 M63960 BC004482 BC001888	12180	-	AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ891525|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ894715|CLCF1|23529|cardiotrophin-like cytokine factor 1##AY049779|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066229|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066230|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066231|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF172854|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC012939|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF176911|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_013246|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF179890|POLD4|57804|polymerase (DNA-directed), delta 4##BC001334|POLD4|57804|polymerase (DNA-directed), delta 4##BC070250|POLD4|57804|polymerase (DNA-directed), delta 4##AB209274|POLD4|57804|polymerase (DNA-directed), delta 4##NM_021173|POLD4|57804|polymerase (DNA-directed), delta 4##BC014848|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_004584|RAD9A|5883|RAD9 homolog A (S. pombe)##U53174|RAD9A|5883|RAD9 homolog A (S. pombe)##AK315348|RAD9A|5883|RAD9 homolog A (S. pombe)##CR536508|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_001243224|RAD9A|5883|RAD9 homolog A (S. pombe)##BT006629|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##S57501|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##AK313586|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##X70848|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##M63960|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC004482|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC001888|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme	0.87545	CTCF.p2:-1:0.875
chr1	224238646	224238769	reg1009267.p1	11.022	+	NM_001031685 NM_005426 TSC_hg19_v1_chr1_-_224033682	-205013	-	TSC_hg19_v1_chr1_-_224033620 BC046150 AJ318888 U58334 BC058918	-205084	-	AB384887 TSC_hg19_v1_chr1_-_224033497 AK294432	-205244	-	NM_001136115 NM_015176 TSC_hg19_v1_chr1_+_224301812 AK001628 AK307892 BC031576 AK303381 CU689186	63103	+	TSC_hg19_v1_chr1_+_224370925 BC000961 NM_003676	132215	+	TSC_hg19_v1_chr1_+_224370941 AK308232 AF466375 AY423730 AF002668 CU674476	132280	+	NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2##BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2##AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2##U58334|TP53BP2|7159|tumor protein p53 binding protein, 2##BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2##AK294432|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_001136115|FBXO28|23219|F-box protein 28##NM_015176|FBXO28|23219|F-box protein 28##AK001628|FBXO28|23219|F-box protein 28##AK307892|FBXO28|23219|F-box protein 28##BC031576|FBXO28|23219|F-box protein 28##AK303381|FBXO28|23219|F-box protein 28##BC000961|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_003676|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AK308232|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF466375|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AY423730|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF002668|DEGS1|8560|delta(4)-desaturase, sphingolipid 1	0.252183	
chr1	91748396	91748511	reg1008328.p1	11.021	+	BC150177 TSC_hg19_v1_chr1_-_91487794 NM_032186 NM_201269	-260663	-	TSC_hg19_v1_chr1_-_91487593 BC110841 BC132776 BC132778	-260818	-	TSC_hg19_v1_chr1_-_91487586 BC092462	-260864	-	TSC_hg19_v1_chr1_-_91870367 AB058637 AK294754 AK302582 AB058636 AB204867 NM_001017975	121919	-	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	217966	+	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	218228	+	BC150177|ZNF644|84146|zinc finger protein 644##NM_032186|ZNF644|84146|zinc finger protein 644##NM_201269|ZNF644|84146|zinc finger protein 644##BC110841|ZNF644|84146|zinc finger protein 644##BC132776|ZNF644|84146|zinc finger protein 644##BC132778|ZNF644|84146|zinc finger protein 644##BC092462|ZNF644|84146|zinc finger protein 644##AB058637|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK294754|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK302582|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB058636|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB204867|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001017975|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	0.931332	CTCF.p2:-10:0.931
chr1	84049448	84049600	reg1010771.p1	11.020	+	AF104266 AF104938 AF104939 NM_012302	-1783443	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	-2277597	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-4577097	-	AK097722 TSC_hg19_v1_chr1_-_84326308	276744	-	TSC_hg19_v1_chr1_-_84326677 BC036594	277152	-	AK126792 BC048970 BC032829 TSC_hg19_v1_chr1_-_84464848 BC060878 BC028350 NM_024686	415272	-	AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	0.697447	CTCF.p2:17:0.680
chr22	41897346	41897468	reg1008235.p1	11.020	+	TSC_hg19_v1_chr22_+_41865120 AK293562 AK297213 AK301321 AK314845 AK302691 AK296260 BC026196 BC014092 NM_001098 U80040 CR456365 AB385022 CR536568 CU012932 CU013220 DQ893674 DQ895836	-32276	+	AB489147 CU012956 CU013244 EU446678 TSC_hg19_v1_chr22_-_41864681 BC075808 CR456398 BC007321 NM_032758	-32723	-	TSC_hg19_v1_chr22_-_41842881 NM_016272	-54468	-	TSC_hg19_v1_chr22_-_41940381 AB051452 BC088367 BC017248	42946	-	TSC_hg19_v1_chr22_-_41940495 AY092087 AK026524 AK129663 NM_138338 NM_001018050 NM_001018052 CR456459	43093	-	TSC_hg19_v1_chr22_+_41957014 NM_014460 AK313407 BC067113 AL834417	59662	+	AK293562|ACO2|50|aconitase 2, mitochondrial##AK297213|ACO2|50|aconitase 2, mitochondrial##AK301321|ACO2|50|aconitase 2, mitochondrial##AK314845|ACO2|50|aconitase 2, mitochondrial##AK302691|ACO2|50|aconitase 2, mitochondrial##AK296260|ACO2|50|aconitase 2, mitochondrial##BC026196|ACO2|50|aconitase 2, mitochondrial##BC014092|ACO2|50|aconitase 2, mitochondrial##NM_001098|ACO2|50|aconitase 2, mitochondrial##U80040|ACO2|50|aconitase 2, mitochondrial##CR456365|ACO2|50|aconitase 2, mitochondrial##CR536568|ACO2|50|aconitase 2, mitochondrial##CU012932|ACO2|50|aconitase 2, mitochondrial##CU013220|ACO2|50|aconitase 2, mitochondrial##DQ893674|ACO2|50|aconitase 2, mitochondrial##DQ895836|ACO2|50|aconitase 2, mitochondrial##CU012956|PHF5A|84844|PHD finger protein 5A##CU013244|PHF5A|84844|PHD finger protein 5A##EU446678|PHF5A|84844|PHD finger protein 5A##BC075808|PHF5A|84844|PHD finger protein 5A##CR456398|PHF5A|84844|PHD finger protein 5A##BC007321|PHF5A|84844|PHD finger protein 5A##NM_032758|PHF5A|84844|PHD finger protein 5A##NM_016272|TOB2|10766|transducer of ERBB2, 2##AB051452|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC088367|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC017248|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AY092087|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK026524|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK129663|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_138338|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018050|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018052|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##CR456459|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_014460|CSDC2|27254|cold shock domain containing C2, RNA binding##AK313407|CSDC2|27254|cold shock domain containing C2, RNA binding##BC067113|CSDC2|27254|cold shock domain containing C2, RNA binding##AL834417|CSDC2|27254|cold shock domain containing C2, RNA binding	0.0	
chr11	126350745	126350873	reg1008177.p2	11.019	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	-74811	+	NM_006278 X74570	-124714	+	TSC_hg19_v1_chr11_-_126225452 AK096370	-125346	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	519851	-	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	519916	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	522496	+	AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK096370|FLJ39051|399972|uncharacterized LOC399972##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)	0.364142	CTCF.p2:7:0.364
chr1	33764390	33764495	reg1006719.p2	11.019	+	TSC_hg19_v1_chr1_+_33722167 NM_152493	-42277	+	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	-116794	-	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	-217709	+	TSC_hg19_v1_chr1_-_33813262 AK055807	48854	-	BC029269 TSC_hg19_v1_chr1_-_33815374 BC068573 BC092492 BC110863	50927	-	AK128821 TSC_hg19_v1_chr1_-_33815496 BC028396 BC018602	51011	-	NM_152493|ZNF362|149076|zinc finger protein 362##AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##BC029269|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC068573|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC092492|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC110863|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AK128821|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC028396|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC018602|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	0.046525	
chr9	127905966	127906110	reg1008806.p2	11.018	+	AB590983 TSC_hg19_v1_chr9_-_127905808 BC104030 BC104031 BC104032 AK098024 AK093983 AX748393 NM_001144877 NM_173690	-247	-	TSC_hg19_v1_chr9_-_127703357 BC032853 U51587 NM_002077	-202699	-	TSC_hg19_v1_chr9_-_127703273 AK302445	-202777	-	AB385530 AF035158 BT019708 X92972 TSC_hg19_v1_chr9_-_127952023	45971	-	AK295752 TSC_hg19_v1_chr9_-_127952069 AK312332 BC006990 AK316527 AK295190 AK299087 NM_001123355 NM_001123369 NM_002721	46089	-	TSC_hg19_v1_chr9_+_127962821 BC065725 NM_001174152 NM_001174153 AL832249 BC047023 Z97074	56787	+	BC104030|SCAI|286205|suppressor of cancer cell invasion##BC104031|SCAI|286205|suppressor of cancer cell invasion##BC104032|SCAI|286205|suppressor of cancer cell invasion##AK098024|SCAI|286205|suppressor of cancer cell invasion##AK093983|SCAI|286205|suppressor of cancer cell invasion##NM_001144877|SCAI|286205|suppressor of cancer cell invasion##NM_173690|SCAI|286205|suppressor of cancer cell invasion##BC032853|GOLGA1|2800|golgin A1##U51587|GOLGA1|2800|golgin A1##NM_002077|GOLGA1|2800|golgin A1##AK302445|GOLGA1|2800|golgin A1##AF035158|PPP6C|5537|protein phosphatase 6, catalytic subunit##BT019708|PPP6C|5537|protein phosphatase 6, catalytic subunit##X92972|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK295752|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK312332|PPP6C|5537|protein phosphatase 6, catalytic subunit##BC006990|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK316527|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK295190|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK299087|PPP6C|5537|protein phosphatase 6, catalytic subunit##NM_001123355|PPP6C|5537|protein phosphatase 6, catalytic subunit##NM_001123369|PPP6C|5537|protein phosphatase 6, catalytic subunit##NM_002721|PPP6C|5537|protein phosphatase 6, catalytic subunit##BC065725|RABEPK|10244|Rab9 effector protein with kelch motifs##NM_001174152|RABEPK|10244|Rab9 effector protein with kelch motifs##NM_001174153|RABEPK|10244|Rab9 effector protein with kelch motifs##AL832249|RABEPK|10244|Rab9 effector protein with kelch motifs##BC047023|RABEPK|10244|Rab9 effector protein with kelch motifs##Z97074|RABEPK|10244|Rab9 effector protein with kelch motifs	0.840414	CTCF.p2:-59:0.724
chr8	73454830	73454956	reg1011675.p1	11.017	+	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	-5250	+	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	-467059	-	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-698185	-	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	466219	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	550549	-	BC150551 BC150552 NM_001243237	716843	-	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84##BC150551|LOC100130301|100130301|uncharacterized LOC100130301##BC150552|LOC100130301|100130301|uncharacterized LOC100130301##NM_001243237|LOC100130301|100130301|uncharacterized LOC100130301	0.0	
chr4	77432394	77432510	reg1007273.p1	11.016	+	AB055660 NM_020859	-76200	+	BC035224 NM_001042784	-103995	-	TSC_hg19_v1_chr4_+_77227894 DQ891974 DQ895165 CU692542	-204551	+	AK027744 TSC_hg19_v1_chr4_+_77610613	178159	+	TSC_hg19_v1_chr4_+_77610738 AK304103	178299	+	NM_001029870 BC137241 BC137255	386587	-	AB055660|SHROOM3|57619|shroom family member 3##NM_020859|SHROOM3|57619|shroom family member 3##BC035224|CCDC158|339965|coiled-coil domain containing 158##NM_001042784|CCDC158|339965|coiled-coil domain containing 158##DQ891974|STBD1|8987|starch binding domain 1##DQ895165|STBD1|8987|starch binding domain 1##AK027744|SHROOM3|57619|shroom family member 3##AK304103|SHROOM3|57619|shroom family member 3##NM_001029870|ANKRD56|345079|ankyrin repeat domain 56##BC137241|ANKRD56|345079|ankyrin repeat domain 56##BC137255|ANKRD56|345079|ankyrin repeat domain 56	0.977759	CTCF.p2:-45:0.978
chr6	134478040	134478172	reg1010588.p1	11.016	+	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	-104403	-	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	-203761	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	-204742	+	CU674630 Y10032 AF153609 BC001263 FM205710 TSC_hg19_v1_chr6_-_134496003 AK098509 AK295422 BX649005	17868	-	TSC_hg19_v1_chr6_-_134496010 NM_005627	17913	-	FM205707 TSC_hg19_v1_chr6_-_134496850	18755	-	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1##Y10032|SGK1|6446|serum/glucocorticoid regulated kinase 1##AF153609|SGK1|6446|serum/glucocorticoid regulated kinase 1##BC001263|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205710|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK098509|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK295422|SGK1|6446|serum/glucocorticoid regulated kinase 1##BX649005|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_005627|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205707|SGK1|6446|serum/glucocorticoid regulated kinase 1	0.973479	CTCF.p2:-12:0.973
chr1	151168886	151169022	reg1009438.p2	11.015	+	TSC_hg19_v1_chr1_-_151162674 AK310045 DQ655941	-6281	-	DQ892940 DQ896189 AB464341 BT019356 BT019357 AK222935 AK222939 TSC_hg19_v1_chr1_-_151162644 BC003151 D43642 NM_005997 AK225130 AK297565	-6333	-	AF165217 AK313280 AK092700 AK300675 AX747678 BC017810 BX647346 AF177173 NM_013353	-20469	-	TSC_hg19_v1_chr1_+_151171050 AK309826 NM_001135636 NM_001135637 NM_001135638 NM_003557 AK295691 BC007833 U78576 BC007005 U78577 U78575 AK291015	2079	+	TSC_hg19_v1_chr1_+_151227206 NM_002810 U24704	58243	+	TSC_hg19_v1_chr1_+_151227209 BC072008	58267	+	AK310045|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##DQ655941|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##DQ892940|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##DQ896189|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##BT019356|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##BT019357|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK222935|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK222939|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##BC003151|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##D43642|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##NM_005997|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK225130|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK297565|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AF165217|TMOD4|29765|tropomodulin 4 (muscle)##AK313280|TMOD4|29765|tropomodulin 4 (muscle)##AK092700|TMOD4|29765|tropomodulin 4 (muscle)##AK300675|TMOD4|29765|tropomodulin 4 (muscle)##BC017810|TMOD4|29765|tropomodulin 4 (muscle)##BX647346|TMOD4|29765|tropomodulin 4 (muscle)##AF177173|TMOD4|29765|tropomodulin 4 (muscle)##NM_013353|TMOD4|29765|tropomodulin 4 (muscle)##AK309826|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_001135636|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_001135637|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_001135638|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_003557|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##AK295691|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##BC007833|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##U78576|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##U78577|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##U78575|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##AK291015|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_002810|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##U24704|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##BC072008|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	0.997298	CTCF.p2:0:0.997
chr19	31157360	31157467	reg1009091.p1	11.015	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	-294033	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	-724131	+	BC026184 NM_001252641	-742863	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	682934	-	FJ211597 NM_001205273	925773	+	TSC_hg19_v1_chr19_+_32836524 NM_001136156 NM_014910 AK292526 AB029007 BX640881 BC136417 AL713775	1679149	+	BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5##NM_001136156|ZNF507|22847|zinc finger protein 507##NM_014910|ZNF507|22847|zinc finger protein 507##AK292526|ZNF507|22847|zinc finger protein 507##AB029007|ZNF507|22847|zinc finger protein 507##BX640881|ZNF507|22847|zinc finger protein 507##BC136417|ZNF507|22847|zinc finger protein 507##AL713775|ZNF507|22847|zinc finger protein 507	1.020028	CTCF.p2:-7:0.997
chr17_ctg5_hap1	534535	534648	reg1010940.p1	11.014	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999815	CTCF.p2:5:1.000
chr2	73220330	73220477	reg1010346.p1	11.014	+	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	-75750	+	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	-105873	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	-167299	-	TSC_hg19_v1_chr2_-_73298414 AK024193	78033	-	TSC_hg19_v1_chr2_-_73298842 AL833454 AK314770 AK289731 AY044437 BC101311 BC101312 BC101313 NM_144579	78486	-	AK023823 TSC_hg19_v1_chr2_-_73316784	96380	-	BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1##NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##AK024193|SFXN5|94097|sideroflexin 5##AL833454|SFXN5|94097|sideroflexin 5##AK314770|SFXN5|94097|sideroflexin 5##AK289731|SFXN5|94097|sideroflexin 5##AY044437|SFXN5|94097|sideroflexin 5##BC101311|SFXN5|94097|sideroflexin 5##BC101312|SFXN5|94097|sideroflexin 5##BC101313|SFXN5|94097|sideroflexin 5##NM_144579|SFXN5|94097|sideroflexin 5##AK023823|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)	0.997873	CTCF.p2:-12:0.998
chr12	75920816	75920956	reg1008987.p1	11.013	+	BC005225 TSC_hg19_v1_chr12_-_75905414 NM_007043	-15467	-	BC033887 TSC_hg19_v1_chr12_-_75905393 BC014034 BC026107	-15491	-	AK022133 TSC_hg19_v1_chr12_-_75905382 BC016778 U55766	-15501	-	AF220656 TSC_hg19_v1_chr12_-_76424608	503661	-	TSC_hg19_v1_chr12_-_76425369 BC126425 BC130427 BC110820 U92983 BC018929	504404	-	TSC_hg19_v1_chr12_-_76425376 AK304224 AB587598 NM_007350 Z50194	504641	-	BC005225|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##NM_007043|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC033887|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC014034|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC026107|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK022133|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC016778|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##U55766|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AF220656|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC126425|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC130427|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC110820|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##U92983|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC018929|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##AK304224|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##NM_007350|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##Z50194|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1	0.924473	CTCF.p2:7:0.924
chr9	44420013	44420133	reg1008901.p2	11.013	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-735230	+	NM_001145196	-789344	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-1286586	-	TSC_hg19_v1_chr9_+_45441926 BC006438	1021853	+	BC040528 NM_001113541 NM_015667	21089536	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	22037228	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.93719	CTCF.p2:-5:0.937
chr9	97893755	97893885	reg1012043.p1	11.013	+	AK298959 TSC_hg19_v1_chr9_+_97766501 AK300486	-127345	+	NM_001193329 AJ560639	-371823	+	BC029616 TSC_hg19_v1_chr9_+_97488999	-404817	+	X66894 NM_001243743	185700	-	AK312548 AK222871 TSC_hg19_v1_chr9_-_98079974 BC015748 X66893 AK304887 NM_000136 NM_001243744	186111	-	TSC_hg19_v1_chr9_-_98268874 AB209495 AB233423 AB233424 CU692174	375053	-	AK298959|C9orf3|84909|chromosome 9 open reading frame 3##AK300486|C9orf3|84909|chromosome 9 open reading frame 3##NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3##AJ560639|C9orf3|84909|chromosome 9 open reading frame 3##BC029616|C9orf3|84909|chromosome 9 open reading frame 3##X66894|FANCC|2176|Fanconi anemia, complementation group C##NM_001243743|FANCC|2176|Fanconi anemia, complementation group C##AK312548|FANCC|2176|Fanconi anemia, complementation group C##AK222871|FANCC|2176|Fanconi anemia, complementation group C##BC015748|FANCC|2176|Fanconi anemia, complementation group C##X66893|FANCC|2176|Fanconi anemia, complementation group C##AK304887|FANCC|2176|Fanconi anemia, complementation group C##NM_000136|FANCC|2176|Fanconi anemia, complementation group C##NM_001243744|FANCC|2176|Fanconi anemia, complementation group C##AB209495|PTCH1|5727|patched 1##AB233423|PTCH1|5727|patched 1##AB233424|PTCH1|5727|patched 1	0.85891	CTCF.p2:-2:0.859
chr17	31204347	31204454	reg1007903.p3	11.012	+	TSC_hg19_v1_chr17_-_31204196 BC030602	-187	-	TSC_hg19_v1_chr17_-_31204141 AK127942	-277	-	CU688936 AB385376 AB018270 BC146763 NM_015194	-505	-	NM_001033504 NM_015544	50527	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	50803	+	AF216311 NM_173847 BC100886 BC100887	114502	+	BC030602|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##NM_001033504|TMEM98|26022|transmembrane protein 98##NM_015544|TMEM98|26022|transmembrane protein 98##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3	0.346832	CTCF.p2:-24:0.347
chr18	53082633	53082781	reg1011083.p1	11.012	+	AK095041 NM_001243232	-11482	-	FR748208 TSC_hg19_v1_chr18_-_53068947	-13763	-	FR748209 M74720 AB209741 TSC_hg19_v1_chr18_-_53068920 AK300636	-13869	-	AK300612 NM_001243233	7015	-	AK096862 NM_001243231	95292	-	TSC_hg19_v1_chr18_-_53255424 M74719	172713	-	AK095041|TCF4|6925|transcription factor 4##NM_001243232|TCF4|6925|transcription factor 4##FR748209|TCF4|6925|transcription factor 4##AB209741|TCF4|6925|transcription factor 4##AK300636|TCF4|6925|transcription factor 4##AK300612|TCF4|6925|transcription factor 4##NM_001243233|TCF4|6925|transcription factor 4##AK096862|TCF4|6925|transcription factor 4##NM_001243231|TCF4|6925|transcription factor 4##M74719|TCF4|6925|transcription factor 4	0.997505	CTCF.p2:-11:0.998
chr12	94940098	94940230	reg1009579.p1	11.011	+	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-86432	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-86522	-	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	-86633	-	EU831778 EU831856 BC040535 NM_020698	104100	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	457306	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	457352	-	BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	0.174421	
chr20	36280429	36280510	reg1006400.p1	11.011	+	TSC_hg19_v1_chr20_-_36156284 AK074498 NM_001167820 NM_006698	-124157	-	TSC_hg19_v1_chr20_-_36156274 AK124822 AF053470 BC047692 AL049288	-124216	-	NM_001167822 TSC_hg19_v1_chr20_-_36156087 BC071704 NM_001167821	-124362	-	TSC_hg19_v1_chr20_+_36322440 NM_030877 BC121005 BC121006 AF239607	41961	+	AK074663 AK130301 TSC_hg19_v1_chr20_+_36322443	41975	+	TSC_hg19_v1_chr20_+_36322503 AF370431 AK293420	42014	+	AK074498|BLCAP|10904|bladder cancer associated protein##NM_001167820|BLCAP|10904|bladder cancer associated protein##NM_006698|BLCAP|10904|bladder cancer associated protein##AK124822|BLCAP|10904|bladder cancer associated protein##AF053470|BLCAP|10904|bladder cancer associated protein##BC047692|BLCAP|10904|bladder cancer associated protein##AL049288|BLCAP|10904|bladder cancer associated protein##NM_001167822|BLCAP|10904|bladder cancer associated protein##BC071704|BLCAP|10904|bladder cancer associated protein##NM_001167821|BLCAP|10904|bladder cancer associated protein##NM_030877|CTNNBL1|56259|catenin, beta like 1##BC121005|CTNNBL1|56259|catenin, beta like 1##BC121006|CTNNBL1|56259|catenin, beta like 1##AF239607|CTNNBL1|56259|catenin, beta like 1##AK074663|CTNNBL1|56259|catenin, beta like 1##AK130301|CTNNBL1|56259|catenin, beta like 1##AF370431|CTNNBL1|56259|catenin, beta like 1##AK293420|CTNNBL1|56259|catenin, beta like 1	0.530387	CTCF.p2:-17:0.512
chr3	169581334	169581459	reg1008146.p1	11.011	+	NM_001080460	-41687	+	AK293661 AK095125 NM_001172779 NM_001172780 NM_153353 TSC_hg19_v1_chr3_-_169530693	-50824	-	TSC_hg19_v1_chr3_-_169530306 BC032841 AK295065 BC028610 AK302466	-51076	-	HQ258307 BC117401 BC143569 BC143582 AY358138 AK097338 NM_024727 AK026912	6261	-	BX648991 BX648534 BX648989 BX537903 NM_182610	48024	+	TSC_hg19_v1_chr3_+_169684598 NM_003262 AK294504 BC003677 BC007040 BC012035 BX648539 D87127 U93239 EU832302 EU832386	103192	+	NM_001080460|LRRIQ4|344657|leucine-rich repeats and IQ motif containing 4##AK293661|LRRC34|151827|leucine rich repeat containing 34##AK095125|LRRC34|151827|leucine rich repeat containing 34##NM_001172779|LRRC34|151827|leucine rich repeat containing 34##NM_001172780|LRRC34|151827|leucine rich repeat containing 34##NM_153353|LRRC34|151827|leucine rich repeat containing 34##BC032841|LRRC34|151827|leucine rich repeat containing 34##AK295065|LRRC34|151827|leucine rich repeat containing 34##BC028610|LRRC34|151827|leucine rich repeat containing 34##AK302466|LRRC34|151827|leucine rich repeat containing 34##HQ258307|LRRC31|79782|leucine rich repeat containing 31##BC117401|LRRC31|79782|leucine rich repeat containing 31##BC143569|LRRC31|79782|leucine rich repeat containing 31##BC143582|LRRC31|79782|leucine rich repeat containing 31##AY358138|LRRC31|79782|leucine rich repeat containing 31##AK097338|LRRC31|79782|leucine rich repeat containing 31##NM_024727|LRRC31|79782|leucine rich repeat containing 31##AK026912|LRRC31|79782|leucine rich repeat containing 31##BX648991|SAMD7|344658|sterile alpha motif domain containing 7##BX648534|SAMD7|344658|sterile alpha motif domain containing 7##BX648989|SAMD7|344658|sterile alpha motif domain containing 7##BX537903|SAMD7|344658|sterile alpha motif domain containing 7##NM_182610|SAMD7|344658|sterile alpha motif domain containing 7##NM_003262|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC003677|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC007040|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC012035|SEC62|7095|SEC62 homolog (S. cerevisiae)##BX648539|SEC62|7095|SEC62 homolog (S. cerevisiae)##D87127|SEC62|7095|SEC62 homolog (S. cerevisiae)##U93239|SEC62|7095|SEC62 homolog (S. cerevisiae)##EU832302|SEC62|7095|SEC62 homolog (S. cerevisiae)##EU832386|SEC62|7095|SEC62 homolog (S. cerevisiae)	0.967216	CTCF.p2:-3:0.967
chr5	54640362	54640474	reg1009317.p2	11.011	+	AK291649 AK304788 TSC_hg19_v1_chr5_+_54603828 D29641 BC065258 AB527662	-36584	+	TSC_hg19_v1_chr5_+_54603816 BC104996 BC113509 BC028604	-36612	+	NM_015360 BC105291 BX640789	-36823	+	BC040295 CU691780 AB000888 BC117133 BC143281 BC168254 TSC_hg19_v1_chr5_-_54830793 AF017116 BC039847 AF014402 AF014403 BC008787 NM_003711 NM_176895	190250	-	TSC_hg19_v1_chr5_-_55008090 BC101361 BC101362 AK075190	367668	-	TSC_hg19_v1_chr5_-_55008148 AK122957 BC066891 NM_173514	367730	-	AK291649|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##AK304788|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##D29641|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC065258|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC104996|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC113509|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC028604|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##NM_015360|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC105291|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BX640789|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC040295|RNF138P1|379013|ring finger protein 138 pseudogene 1##AB000888|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC117133|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC143281|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC168254|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF017116|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC039847|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF014402|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF014403|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC008787|PPAP2A|8611|phosphatidic acid phosphatase type 2A##NM_003711|PPAP2A|8611|phosphatidic acid phosphatase type 2A##NM_176895|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC101361|SLC38A9|153129|solute carrier family 38, member 9##BC101362|SLC38A9|153129|solute carrier family 38, member 9##AK075190|SLC38A9|153129|solute carrier family 38, member 9##AK122957|SLC38A9|153129|solute carrier family 38, member 9##BC066891|SLC38A9|153129|solute carrier family 38, member 9##NM_173514|SLC38A9|153129|solute carrier family 38, member 9	0.943421	CTCF.p2:-5:0.943
chr11	104871649	104871794	reg1011743.p1	11.010	+	TSC_hg19_v1_chr11_-_104839279 U28979 BC008060 U28976 BC017839 U28014 AK225751 Z48810 U25804 AK296081 AK304222 NM_001225	-32424	-	NM_033306 U28977 U28978	-44300	-	AF464191 AF464192 AF464193 AF464194 AF464195 AF486844 AF486845 AF486846 AF486847 NM_001191016	-102325	-	AK296660 NM_001136109 NM_001136110 NM_001136112 NM_004347	22173	-	BC062327 TSC_hg19_v1_chr11_-_104905871 AK296646 AK301037 AK313516 AK290114 AK290122 AK310059 AK223503	34147	-	AY885669 TSC_hg19_v1_chr11_-_104916063 BC104635 BC070196 NM_001017534 NM_052889 AK311902 AK125640 BC117478 BC117480	44350	-	U28979|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC008060|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28976|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC017839|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28014|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK225751|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##Z48810|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U25804|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK296081|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK304222|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##NM_001225|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##NM_033306|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28977|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28978|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AF464191|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464192|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464193|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464194|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464195|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486844|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486845|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486846|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486847|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_001191016|CASP12|100506742|caspase 12 (gene/pseudogene)##AK296660|CASP5|838|caspase 5, apoptosis-related cysteine peptidase##NM_001136109|CASP5|838|caspase 5, apoptosis-related cysteine peptidase##NM_001136110|CASP5|838|caspase 5, apoptosis-related cysteine peptidase##NM_001136112|CASP5|838|caspase 5, apoptosis-related cysteine peptidase##NM_004347|CASP5|838|caspase 5, apoptosis-related cysteine peptidase##BC062327|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##AK296646|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##AK301037|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##AK313516|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##AK290114|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##AK290122|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##AK310059|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##AK223503|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##AY885669|CARD16|114769|caspase recruitment domain family, member 16##BC104635|CARD16|114769|caspase recruitment domain family, member 16##BC070196|CARD16|114769|caspase recruitment domain family, member 16##NM_001017534|CARD16|114769|caspase recruitment domain family, member 16##NM_052889|CARD16|114769|caspase recruitment domain family, member 16##AK311902|CARD16|114769|caspase recruitment domain family, member 16##AK125640|CARD16|114769|caspase recruitment domain family, member 16##BC117478|CARD16|114769|caspase recruitment domain family, member 16##BC117480|CARD16|114769|caspase recruitment domain family, member 16	0.998344	CTCF.p2:15:0.998
chr13	51644294	51644425	reg1010876.p1	11.010	+	BC001397 BC005088 BC007332 BC010174 TSC_hg19_v1_chr13_+_51484193	-160202	+	TSC_hg19_v1_chr13_+_51483926 AK021774 AK223340 BC036744	-160405	+	TSC_hg19_v1_chr13_+_51483905 AY764036	-160455	+	TSC_hg19_v1_chr13_+_51796507 BC034497 NM_001242312 NM_145019 AK055269 AK096364 BC051771 AB527542 CU690842	152157	+	AX772926 NM_001101320 AM402969	270836	+	AF097645 BC039829 BC018725 BC013358 BC032386 TSC_hg19_v1_chr13_-_52027173 AK296801 AK304218	382794	-	BC001397|RNASEH2B|79621|ribonuclease H2, subunit B##BC005088|RNASEH2B|79621|ribonuclease H2, subunit B##BC007332|RNASEH2B|79621|ribonuclease H2, subunit B##BC010174|RNASEH2B|79621|ribonuclease H2, subunit B##AK021774|RNASEH2B|79621|ribonuclease H2, subunit B##AK223340|RNASEH2B|79621|ribonuclease H2, subunit B##BC036744|RNASEH2B|79621|ribonuclease H2, subunit B##AY764036|RNASEH2B|79621|ribonuclease H2, subunit B##BC034497|FAM124A|220108|family with sequence similarity 124A##NM_001242312|FAM124A|220108|family with sequence similarity 124A##NM_145019|FAM124A|220108|family with sequence similarity 124A##AK055269|FAM124A|220108|family with sequence similarity 124A##AK096364|FAM124A|220108|family with sequence similarity 124A##BC051771|FAM124A|220108|family with sequence similarity 124A##AX772926|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##NM_001101320|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AM402969|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AF097645|INTS6|26512|integrator complex subunit 6##BC039829|INTS6|26512|integrator complex subunit 6##BC018725|INTS6|26512|integrator complex subunit 6##BC013358|INTS6|26512|integrator complex subunit 6##BC032386|INTS6|26512|integrator complex subunit 6##AK296801|INTS6|26512|integrator complex subunit 6##AK304218|INTS6|26512|integrator complex subunit 6	0.214918	CTCF.p2:10:0.215
chr8	95284688	95284810	reg1009840.p1	11.010	+	TSC_hg19_v1_chr8_-_95274548 AK314017 BC022010 NM_005261 NM_181702	-10201	-	U10550 TSC_hg19_v1_chr8_-_95274525	-10227	-	AK312873 NM_001144663	-55219	-	AF007866 NM_001205263	164406	-	BC001965 AF112481 BC020668 AK290437 TSC_hg19_v1_chr8_-_95487344 NM_001205262 NM_012415	202570	-	AB037850 AF116724 HQ258534 TSC_hg19_v1_chr8_-_95565696 AL832487 BC112288 BC113380 NM_015496 NM_183009	280958	-	AK314017|GEM|2669|GTP binding protein overexpressed in skeletal muscle##BC022010|GEM|2669|GTP binding protein overexpressed in skeletal muscle##NM_005261|GEM|2669|GTP binding protein overexpressed in skeletal muscle##NM_181702|GEM|2669|GTP binding protein overexpressed in skeletal muscle##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205262|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AB037850|KIAA1429|25962|KIAA1429##AF116724|KIAA1429|25962|KIAA1429##AL832487|KIAA1429|25962|KIAA1429##BC112288|KIAA1429|25962|KIAA1429##BC113380|KIAA1429|25962|KIAA1429##NM_015496|KIAA1429|25962|KIAA1429##NM_183009|KIAA1429|25962|KIAA1429	0.920823	CTCF.p2:6:0.921
chr13	102409924	102410040	reg1009250.p1	11.009	+	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	-304987	+	TSC_hg19_v1_chr13_-_102068838 BC028390	-341142	-	AY141972 AK094669 BC012128 NM_052867 TSC_hg19_v1_chr13_-_102068817	-341221	-	NM_004115 U66200	159012	-	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	644093	-	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	839354	+	AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC028390|NALCN|259232|sodium leak channel, non-selective##AY141972|NALCN|259232|sodium leak channel, non-selective##AK094669|NALCN|259232|sodium leak channel, non-selective##BC012128|NALCN|259232|sodium leak channel, non-selective##NM_052867|NALCN|259232|sodium leak channel, non-selective##NM_004115|FGF14|2259|fibroblast growth factor 14##U66200|FGF14|2259|fibroblast growth factor 14##BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II	0.370837	CTCF.p2:12:0.371
chr14	29223575	29223695	reg1008170.p1	11.008	+	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	-2156647	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	-3704397	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-4120217	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	12593	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	13278	+	TSC_hg19_v1_chr14_+_29241992 BX248251	18360	+	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23	0.283963	CTCF.p2:-11:0.284
chr16	67373490	67373600	reg1008800.p2	11.008	+	TSC_hg19_v1_chr16_+_67360728 AY963267 BC026156 NM_018296 BC018031	-12793	+	BC070103 BC094790 AK302748 AK302567 BC117335 NM_001100915 AK097481	-12901	-	TSC_hg19_v1_chr16_+_67313455 BC063501 NM_001129729 NM_001129731 BC054486	-60103	+	AK311487 NM_001161575 AK297329 AK309897 AK001866 AK292311 AY313780 AK301766	7733	+	TSC_hg19_v1_chr16_-_67427402 AF132972 AF078846 BC000691 NM_015964 NM_016140	53834	-	TSC_hg19_v1_chr16_-_67450360 NM_013304 U90653 BC021908	76752	-	AY963267|LRRC36|55282|leucine rich repeat containing 36##BC026156|LRRC36|55282|leucine rich repeat containing 36##NM_018296|LRRC36|55282|leucine rich repeat containing 36##BC018031|LRRC36|55282|leucine rich repeat containing 36##BC070103|KCTD19|146212|potassium channel tetramerisation domain containing 19##BC094790|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK302748|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK302567|KCTD19|146212|potassium channel tetramerisation domain containing 19##BC117335|KCTD19|146212|potassium channel tetramerisation domain containing 19##NM_001100915|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK097481|KCTD19|146212|potassium channel tetramerisation domain containing 19##BC063501|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129729|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129731|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC054486|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##AK311487|LRRC36|55282|leucine rich repeat containing 36##NM_001161575|LRRC36|55282|leucine rich repeat containing 36##AK297329|LRRC36|55282|leucine rich repeat containing 36##AK309897|LRRC36|55282|leucine rich repeat containing 36##AK001866|LRRC36|55282|leucine rich repeat containing 36##AK292311|LRRC36|55282|leucine rich repeat containing 36##AY313780|LRRC36|55282|leucine rich repeat containing 36##AK301766|LRRC36|55282|leucine rich repeat containing 36##AF132972|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AF078846|TPPP3|51673|tubulin polymerization-promoting protein family member 3##BC000691|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_015964|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_016140|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_013304|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U90653|ZDHHC1|29800|zinc finger, DHHC-type containing 1##BC021908|ZDHHC1|29800|zinc finger, DHHC-type containing 1	0.126484	
chr11	106027056	106027178	reg1008383.p1	11.007	+	NM_152433 NM_198439	-78653	-	AF136978 AF151057 AF151838 AF302110 NM_015423 TSC_hg19_v1_chr11_+_105948388 BC016728 AK312529 BC015470 AK293362 AB463408 CU677695 DQ891342 DQ894524	-78752	+	TSC_hg19_v1_chr11_-_105892952 AL834523 BC041118 AB058729 NM_032424	-134158	-	BC085622 TSC_hg19_v1_chr11_-_106889260 BC130484 BC130488 BC144033 NM_000855 X63282 Z50053	861971	-	AK293001 TSC_hg19_v1_chr11_-_107328552 BX649022 BX647832 BC107418 BC070142 BX648704 AK126881 NM_152434	1301422	-	AK293603 TSC_hg19_v1_chr11_-_107436464 BC015183 AK304413 AB218768 AK095523 NM_138775	1409327	-	NM_152433|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##NM_198439|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##AF136978|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151057|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151838|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF302110|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##NM_015423|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC016728|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK312529|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC015470|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK293362|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ891342|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ894524|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AL834523|KIAA1826|84437|KIAA1826##BC041118|KIAA1826|84437|KIAA1826##AB058729|KIAA1826|84437|KIAA1826##NM_032424|KIAA1826|84437|KIAA1826##BC130484|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC130488|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC144033|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_000855|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##X63282|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##Z50053|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##AK293001|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX649022|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX647832|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC107418|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC070142|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX648704|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK126881|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##NM_152434|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK293603|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##BC015183|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK304413|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AB218768|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK095523|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##NM_138775|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)	0.968402	CTCF.p2:-2:0.968
chr3	67432221	67432367	reg1010744.p1	11.007	+	NM_032505 AK096640 AK300397	-383566	+	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	-880830	-	AF381545 BC140907 NM_015541 AY730707	-881442	-	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	272768	-	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	272856	+	AY325114 NM_001252216	608439	+	NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AY325114|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##NM_001252216|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1	0.056318	
chr4	9125389	9125521	reg1010810.p1	11.007	+	NM_001040071	-173979	+	AB593128 M99587 NM_018942	-251958	-	U83411 TSC_hg19_v1_chr4_+_8594521	-530932	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	91674	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	120148	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	134393	+	NM_001040071|LOC650293|650293|seven transmembrane helix receptor##M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.995288	CTCF.p2:11:0.995
chr7	30549887	30550004	reg1008491.p1	11.007	+	CU674304 TSC_hg19_v1_chr7_-_30544445 BC013937 BC005356 AK315608 BC019243 BC000625 NM_001199815 NM_001199816 NM_001199817 NM_024051	-5544	-	AY128682 AY128683 AY128684 AY128685 AY128686 AF113925 BC040339 AK300367 AK023969 NM_006092	-31624	-	TSC_hg19_v1_chr7_+_30324634 AY054122	-225289	+	NM_002047	84235	+	TSC_hg19_v1_chr7_-_30634379 AK096687	84427	-	TSC_hg19_v1_chr7_+_30634447 AK074524 AK295490 BC007722 AK310351 BC000065 D30658 BC007755 AB528358 DQ892773 DQ896021 U09587	84561	+	BC013937|GGCT|79017|gamma-glutamylcyclotransferase##BC005356|GGCT|79017|gamma-glutamylcyclotransferase##AK315608|GGCT|79017|gamma-glutamylcyclotransferase##BC019243|GGCT|79017|gamma-glutamylcyclotransferase##BC000625|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199815|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199816|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199817|GGCT|79017|gamma-glutamylcyclotransferase##NM_024051|GGCT|79017|gamma-glutamylcyclotransferase##AY128682|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128683|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128684|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128685|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128686|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AF113925|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC040339|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK300367|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK023969|NOD1|10392|nucleotide-binding oligomerization domain containing 1##NM_006092|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY054122|ZNRF2|223082|zinc and ring finger 2##NM_002047|GARS|2617|glycyl-tRNA synthetase##AK096687|LOC401320|401320|uncharacterized LOC401320##AK074524|GARS|2617|glycyl-tRNA synthetase##AK295490|GARS|2617|glycyl-tRNA synthetase##BC007722|GARS|2617|glycyl-tRNA synthetase##AK310351|GARS|2617|glycyl-tRNA synthetase##BC000065|GARS|2617|glycyl-tRNA synthetase##D30658|GARS|2617|glycyl-tRNA synthetase##BC007755|GARS|2617|glycyl-tRNA synthetase##DQ892773|GARS|2617|glycyl-tRNA synthetase##DQ896021|GARS|2617|glycyl-tRNA synthetase##U09587|GARS|2617|glycyl-tRNA synthetase	0.970544	CTCF.p2:-17:0.971
chr18	2932324	2932442	reg1008003.p1	11.006	+	AB026706 TSC_hg19_v1_chr18_+_2907037	-25382	+	TSC_hg19_v1_chr18_+_2847006 AF270513 NM_032048 BC032231 BC136541	-85352	+	BC006008 NM_015295 TSC_hg19_v1_chr18_+_2655885	-276469	+	BC152448 D87436 NM_014646	79561	-	BC116183 BC116184 TSC_hg19_v1_chr18_-_3219875	287477	-	TSC_hg19_v1_chr18_-_3219987 AJ621424 AK125322 NM_003803 NM_019856	287662	-	AB026706|EMILIN2|84034|elastin microfibril interfacer 2##AF270513|EMILIN2|84034|elastin microfibril interfacer 2##NM_032048|EMILIN2|84034|elastin microfibril interfacer 2##BC032231|EMILIN2|84034|elastin microfibril interfacer 2##BC136541|EMILIN2|84034|elastin microfibril interfacer 2##BC006008|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##NM_015295|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##BC152448|LPIN2|9663|lipin 2##D87436|LPIN2|9663|lipin 2##NM_014646|LPIN2|9663|lipin 2##BC116183|MYOM1|8736|myomesin 1, 185kDa##BC116184|MYOM1|8736|myomesin 1, 185kDa##AJ621424|MYOM1|8736|myomesin 1, 185kDa##AK125322|MYOM1|8736|myomesin 1, 185kDa##NM_003803|MYOM1|8736|myomesin 1, 185kDa##NM_019856|MYOM1|8736|myomesin 1, 185kDa	0.948001	CTCF.p2:-7:0.948
chr6	167631984	167632102	reg1009959.p1	11.006	+	NM_001145121	-47963	+	BC095537 NM_005299	-60727	-	NM_031409 U68031 U68030	-95794	+	AK091987 AX747293 NM_001143947 NM_018974 AJ422141 AJ508812 BC098248 BC099718 BC105635	72833	+	AK093039 AK225984 AX747876 NM_031949 BC030650 AK301755 BC047411 AK314450 AY026506 CU688966 CU690408	106574	+	BC068592 U03399 BC063451 BC033909 BC034995 NM_004610	165914	-	NM_001145121|TCP10L2|401285|t-complex 10-like 2 (mouse)##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##AK091987|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_001143947|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_018974|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ422141|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ508812|UNC93A|54346|unc-93 homolog A (C. elegans)##BC098248|UNC93A|54346|unc-93 homolog A (C. elegans)##BC099718|UNC93A|54346|unc-93 homolog A (C. elegans)##BC105635|UNC93A|54346|unc-93 homolog A (C. elegans)##AK093039|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK225984|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##NM_031949|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC030650|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK301755|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC047411|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK314450|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AY026506|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC068592|TCP10|6953|t-complex 10 homolog (mouse)##U03399|TCP10|6953|t-complex 10 homolog (mouse)##BC063451|TCP10|6953|t-complex 10 homolog (mouse)##NM_004610|TCP10|6953|t-complex 10 homolog (mouse)	0.99905	CTCF.p2:-12:0.999
chr8	100872089	100872244	reg1011173.p1	11.006	+	TSC_hg19_v1_chr8_+_100025537 BC094749	-846576	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	-846654	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	-846671	+	TSC_hg19_v1_chr8_-_100905892 X13238	33713	-	TSC_hg19_v1_chr8_-_100905910 AK311791	33755	-	NM_004374	34075	-	BC094749|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##X13238|COX6C|1345|cytochrome c oxidase subunit VIc##AK311791|COX6C|1345|cytochrome c oxidase subunit VIc##NM_004374|COX6C|1345|cytochrome c oxidase subunit VIc	0.99866	CTCF.p2:22:0.999
chr16	17561910	17562024	reg1008105.p1	11.005	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-1235437	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1235479	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-1235485	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	2838	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1011424	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1236129	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.969865	CTCF.p2:20:0.970
chr5	36507555	36507679	reg1011080.p1	11.005	+	BC017951 AK058151 AK302947 TSC_hg19_v1_chr5_-_36302002 BC047660 NM_001161429 NM_145000	-205613	-	BC062567 NM_153013 AK304009	-265306	-	NM_001085411 TSC_hg19_v1_chr5_-_36241996	-265629	-	NM_001166696 NM_004172	98839	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	99111	+	NM_001166695 U03504 AB529121 AY954110 TSC_hg19_v1_chr5_+_36608562	100879	+	BC017951|RANBP3L|202151|RAN binding protein 3-like##AK058151|RANBP3L|202151|RAN binding protein 3-like##AK302947|RANBP3L|202151|RAN binding protein 3-like##BC047660|RANBP3L|202151|RAN binding protein 3-like##NM_001161429|RANBP3L|202151|RAN binding protein 3-like##NM_145000|RANBP3L|202151|RAN binding protein 3-like##BC062567|NADKD1|133686|NAD kinase domain containing 1##NM_153013|NADKD1|133686|NAD kinase domain containing 1##AK304009|NADKD1|133686|NAD kinase domain containing 1##NM_001085411|NADKD1|133686|NAD kinase domain containing 1##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	0.999459	CTCF.p2:11:0.999
chr10	99461292	99461414	reg1010174.p1	11.004	+	TSC_hg19_v1_chr10_-_99446983 AK223099 AF218019 AK024533 AK222493 AF131791 NM_021732 AF241786 AY505173	-14324	-	TSC_hg19_v1_chr10_+_99400490 BC003167 DQ893537 DQ893758 BT007330	-60869	+	TSC_hg19_v1_chr10_+_99400444 AJ303098 NM_018425	-60911	+	TSC_hg19_v1_chr10_+_99473461 NM_031484	12111	+	BC062544 BC004995 TSC_hg19_v1_chr10_+_99473485 AF325259	12128	+	TSC_hg19_v1_chr10_+_99496884 AK296295 NM_001002262 NM_001174119 NM_001174120 NM_001174121 NM_001174122 NM_144588 AK057481 AK097945 AK299735 AK300438 BC030621	35515	+	AK223099|AVPI1|60370|arginine vasopressin-induced 1##AF218019|AVPI1|60370|arginine vasopressin-induced 1##AK024533|AVPI1|60370|arginine vasopressin-induced 1##AK222493|AVPI1|60370|arginine vasopressin-induced 1##AF131791|AVPI1|60370|arginine vasopressin-induced 1##NM_021732|AVPI1|60370|arginine vasopressin-induced 1##AF241786|AVPI1|60370|arginine vasopressin-induced 1##BC003167|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##DQ893537|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##DQ893758|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##BT007330|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##AJ303098|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##NM_018425|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##NM_031484|MARVELD1|83742|MARVEL domain containing 1##BC062544|MARVELD1|83742|MARVEL domain containing 1##BC004995|MARVELD1|83742|MARVEL domain containing 1##AF325259|MARVELD1|83742|MARVEL domain containing 1##AK296295|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001002262|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174119|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174120|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174121|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174122|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_144588|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK057481|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK097945|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK299735|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK300438|ZFYVE27|118813|zinc finger, FYVE domain containing 27##BC030621|ZFYVE27|118813|zinc finger, FYVE domain containing 27	0.919159	CTCF.p2:3:0.919
chr16	67499815	67499943	reg1005793.p1	11.004	+	TSC_hg19_v1_chr16_+_67465023 U26726 BC036780 BC064536 NM_000196 U14631	-34849	+	TSC_hg19_v1_chr16_-_67450360 NM_013304 U90653 BC021908	-49582	-	TSC_hg19_v1_chr16_-_67427402 AF132972 AF078846 BC000691 NM_015964 NM_016140	-72500	-	CU679153 DQ893270 DQ896601 X71490 TSC_hg19_v1_chr16_-_67515051 AK300570 AK313035 AK125522 BC008861 NM_004691	15165	-	NM_001138 U88063	17836	-	TSC_hg19_v1_chr16_+_67562734 NM_024519 AK127792 NM_001193522 AK307467 BC012730	62862	+	U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_013304|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U90653|ZDHHC1|29800|zinc finger, DHHC-type containing 1##BC021908|ZDHHC1|29800|zinc finger, DHHC-type containing 1##AF132972|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AF078846|TPPP3|51673|tubulin polymerization-promoting protein family member 3##BC000691|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_015964|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_016140|TPPP3|51673|tubulin polymerization-promoting protein family member 3##DQ893270|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##DQ896601|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##X71490|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK300570|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK313035|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK125522|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##BC008861|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_004691|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_001138|AGRP|181|agouti related protein homolog (mouse)##U88063|AGRP|181|agouti related protein homolog (mouse)##NM_024519|FAM65A|79567|family with sequence similarity 65, member A##AK127792|FAM65A|79567|family with sequence similarity 65, member A##NM_001193522|FAM65A|79567|family with sequence similarity 65, member A##AK307467|FAM65A|79567|family with sequence similarity 65, member A	0.791282	CTCF.p2:13:0.763
chr16	63395052	63395161	reg1007068.p1	11.003	+	AK124734 NM_001796	-1324368	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-4626909	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-4676450	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	1760796	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	1760862	-	TSC_hg19_v1_chr16_-_65155987 AK297377	1760888	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.999327	CTCF.p2:11:0.999
chr1	48559482	48559588	reg1008182.p1	11.002	+	NM_001194986	-96974	-	AF042832 NM_004474	-657847	+	AF275722 NM_012186	-677792	+	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	128857	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	378143	-	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	378310	-	NM_001194986|LOC388630|388630|UPF0632 protein A##AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6	0.191964	
chr15	65346738	65346848	reg1008821.p1	11.001	+	NM_178859 AK129601	-9038	+	TSC_hg19_v1_chr15_-_65321968 AK055688 AB590989 BC016630 BC033687 AK301390 NM_139242	-24830	-	TSC_hg19_v1_chr15_-_65282253 AK301362 NM_001127890 NM_016630	-64547	-	CU691030 AK314914 AK296261 TSC_hg19_v1_chr15_-_65360286 AF233588	13438	-	BC053734 TSC_hg19_v1_chr15_-_65360332 NM_016563	13549	-	NM_001101362	22360	+	NM_178859|OSTBETA|123264|organic solute transporter beta##AK129601|OSTBETA|123264|organic solute transporter beta##AK055688|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##BC016630|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##BC033687|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##AK301390|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##NM_139242|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK314914|RASL12|51285|RAS-like, family 12##AK296261|RASL12|51285|RAS-like, family 12##AF233588|RASL12|51285|RAS-like, family 12##BC053734|RASL12|51285|RAS-like, family 12##NM_016563|RASL12|51285|RAS-like, family 12##NM_001101362|KBTBD13|390594|kelch repeat and BTB (POZ) domain containing 13	1.011077	CTCF.p2:4:0.999
chr6	15441599	15441745	reg1011048.p1	11.001	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-192559	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-192771	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-195260	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	221505	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	221618	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	687630	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.554615	CTCF.p2:10:0.555
chr2	237981109	237981224	reg1009259.p2	11.000	+	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	-502738	+	BC043504 NM_024726 AK294105 BC028699	-565034	-	NM_212556 BX647589	-808172	-	BC036499 NM_006710 NM_198189	12852	+	TSC_hg19_v1_chr2_-_237994424 AK056246	13271	-	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	13354	+	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	0.99937	CTCF.p2:6:0.999
chr19	34532957	34533111	reg1010678.p1	10.999	+	TSC_hg19_v1_chr19_+_34287743 NM_001129994 NM_001129995 NM_024076 AK027901 AK291465 BC001185 BC009335 AK225793 AK294543	-245298	+	BC018723 NM_022467	-357601	+	TSC_hg19_v1_chr19_+_34112858 NM_001127895 NM_001127896 BC014250 BC011380 AB047801	-420099	+	TSC_hg19_v1_chr19_+_34663327 BC016842 NM_001114093 NM_015578	130297	+	TSC_hg19_v1_chr19_+_34663429 AK300208	130392	+	TSC_hg19_v1_chr19_+_34663440 AL834398 AK027643 AB069974 AB069975	130434	+	NM_001129994|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_001129995|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_024076|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK027901|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK291465|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC001185|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC009335|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK225793|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK294543|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127895|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127896|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC014250|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC011380|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##AB047801|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC016842|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_001114093|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_015578|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK300208|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AL834398|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK027643|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069974|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069975|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)	0.999581	CTCF.p2:-9:1.000
chr8	19125235	19125372	reg1009093.p1	10.999	+	TSC_hg19_v1_chr8_-_18871214 AK091317 AX746913 NM_015310	-254017	-	GU727648 TSC_hg19_v1_chr8_-_18871128	-254191	-	AB463178 BC045112 AB023159 NM_206909	-458954	-	TSC_hg19_v1_chr8_+_19171505 NM_001174160 NM_022071 AK024799 AK293301 BC082982 NM_001174159	45980	+	BX649103 NM_001130518	334727	-	AY358441 NM_018371	414790	-	AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3##GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3##BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3##AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_001174160|SH2D4A|63898|SH2 domain containing 4A##NM_022071|SH2D4A|63898|SH2 domain containing 4A##AK024799|SH2D4A|63898|SH2 domain containing 4A##AK293301|SH2D4A|63898|SH2 domain containing 4A##BC082982|SH2D4A|63898|SH2 domain containing 4A##NM_001174159|SH2D4A|63898|SH2 domain containing 4A##BX649103|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_001130518|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AY358441|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018371|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1	0.865226	CTCF.p2:19:0.865
chr12	40706907	40707032	reg1010365.p1	10.998	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	-88110	+	TSC_hg19_v1_chr12_-_40499870 BC047507	-207097	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	-207280	-	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	379313	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	875239	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	1124618	+	NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4	0.948478	CTCF.p2:14:0.948
chr7	31483124	31483256	reg1010261.p1	10.998	+	AK055238 AF248954 NM_022728	-102668	-	TSC_hg19_v1_chr7_+_31092073 NM_001118 NM_001199635 NM_001199636 NM_001199637 AK290046 AK226138	-391086	+	L01406 L09237 NM_000823 AY557192	-479531	+	AK128026 NM_194300	73787	+	NM_001145123 NM_006658	243440	+	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	627315	-	AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##NM_001118|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199635|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199636|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199637|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK290046|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK226138|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##L01406|GHRHR|2692|growth hormone releasing hormone receptor##L09237|GHRHR|2692|growth hormone releasing hormone receptor##NM_000823|GHRHR|2692|growth hormone releasing hormone receptor##AY557192|GHRHR|2692|growth hormone releasing hormone receptor##AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129##NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	0.999516	CTCF.p2:-17:1.000
chr1	247553535	247553650	reg1008609.p1	10.997	+	TSC_hg19_v1_chr1_-_247494994 BC007263 NM_032752	-58575	-	BC126341 BC126367 NM_173858	-134269	+	BC032514 BC096349 BC096350 BC096351 BC099661 BC013605 AK054647 NM_001243740 NM_003431	-218308	-	AK314998 NM_001079821 NM_001127461 TSC_hg19_v1_chr1_+_247579474 AB208891	25877	+	AF410477 AF427617 NM_001127462 NM_001243133 NM_004895 NM_183395	27758	+	NM_001004492 BC137181 BC137205	61703	-	BC007263|ZNF496|84838|zinc finger protein 496##NM_032752|ZNF496|84838|zinc finger protein 496##BC126341|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC126367|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##NM_173858|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC032514|ZNF124|7678|zinc finger protein 124##BC096349|ZNF124|7678|zinc finger protein 124##BC096350|ZNF124|7678|zinc finger protein 124##BC096351|ZNF124|7678|zinc finger protein 124##BC099661|ZNF124|7678|zinc finger protein 124##BC013605|ZNF124|7678|zinc finger protein 124##AK054647|ZNF124|7678|zinc finger protein 124##NM_001243740|ZNF124|7678|zinc finger protein 124##NM_003431|ZNF124|7678|zinc finger protein 124##AK314998|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001079821|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127461|NLRP3|114548|NLR family, pyrin domain containing 3##AB208891|NLRP3|114548|NLR family, pyrin domain containing 3##AF410477|NLRP3|114548|NLR family, pyrin domain containing 3##AF427617|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127462|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001243133|NLRP3|114548|NLR family, pyrin domain containing 3##NM_004895|NLRP3|114548|NLR family, pyrin domain containing 3##NM_183395|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001004492|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##BC137181|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##BC137205|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11	1.064893	CTCF.p2:-9:0.998
chr1	43222753	43222893	reg1010869.p1	10.997	+	AF497644 BC030524 AK298992 AK096063 AK291197 NM_001123395 NM_001185117 NM_148960	-16995	-	BC020164 TSC_hg19_v1_chr1_+_43162416	-60422	+	TSC_hg19_v1_chr1_+_43148644 BC013838	-74239	+	AK027680 AK297980 TSC_hg19_v1_chr1_-_43232700 BC091513 BC143961 BC143962 AK075418 BC004160 AK027648 AF097431 AF097432 BC108311 AK027697 AK300210 BC068461	9865	-	TSC_hg19_v1_chr1_-_43232730 NM_001146289 NM_001243246 NM_022356	9919	-	TSC_hg19_v1_chr1_+_43232919 NM_024097	10092	+	AF497644|CLDN19|149461|claudin 19##BC030524|CLDN19|149461|claudin 19##AK298992|CLDN19|149461|claudin 19##AK096063|CLDN19|149461|claudin 19##AK291197|CLDN19|149461|claudin 19##NM_001123395|CLDN19|149461|claudin 19##NM_001185117|CLDN19|149461|claudin 19##NM_148960|CLDN19|149461|claudin 19##BC020164|YBX1|4904|Y box binding protein 1##BC013838|YBX1|4904|Y box binding protein 1##AK027680|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK297980|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC091513|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC143961|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC143962|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK075418|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC004160|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK027648|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AF097431|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AF097432|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC108311|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK027697|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK300210|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC068461|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_001146289|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_001243246|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_022356|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_024097|C1orf50|79078|chromosome 1 open reading frame 50	0.946829	CTCF.p2:7:0.947
chr1	64602892	64603019	reg1010542.p1	10.997	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	-363296	+	NM_001172818 AK300100	-514062	+	AK293298 NM_001172819 AK298505	-543441	+	BC029895 NM_152489	66534	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	333563	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	607844	+	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_020925|CACHD1|57685|cache domain containing 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2	0.970943	CTCF.p2:4:0.971
chr6	105535613	105535738	reg1008305.p2	10.997	+	AK131411 DQ127228 NM_001004317	-130753	+	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	-227887	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	-227913	-	BC034425 NM_147147	48545	-	NM_007073 AF204172 TSC_hg19_v1_chr6_-_105584689	48951	-	TSC_hg19_v1_chr6_-_105585033 AK289979 BC040502 NM_001199563	49372	-	AK131411|LIN28B|389421|lin-28 homolog B (C. elegans)##DQ127228|LIN28B|389421|lin-28 homolog B (C. elegans)##NM_001004317|LIN28B|389421|lin-28 homolog B (C. elegans)##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034425|BVES|11149|blood vessel epicardial substance##NM_147147|BVES|11149|blood vessel epicardial substance##NM_007073|BVES|11149|blood vessel epicardial substance##AF204172|BVES|11149|blood vessel epicardial substance##AK289979|BVES|11149|blood vessel epicardial substance##BC040502|BVES|11149|blood vessel epicardial substance##NM_001199563|BVES|11149|blood vessel epicardial substance	0.998451	CTCF.p2:-22:0.998
chr7	30452767	30452917	reg1008739.p2	10.997	+	TSC_hg19_v1_chr7_+_30324634 AY054122	-128186	+	TSC_hg19_v1_chr7_+_30324515 AF527533	-128293	+	AF513707 NM_147128	-128920	+	AY128682 AY128683 AY128684 AY128685 AY128686 AF113925 BC040339 AK300367 AK023969 NM_006092	65479	-	CU674304 TSC_hg19_v1_chr7_-_30544445 BC013937 BC005356 AK315608 BC019243 BC000625 NM_001199815 NM_001199816 NM_001199817 NM_024051	91559	-	NM_002047	181338	+	AY054122|ZNRF2|223082|zinc and ring finger 2##AF527533|ZNRF2|223082|zinc and ring finger 2##AF513707|ZNRF2|223082|zinc and ring finger 2##NM_147128|ZNRF2|223082|zinc and ring finger 2##AY128682|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128683|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128684|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128685|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128686|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AF113925|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC040339|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK300367|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK023969|NOD1|10392|nucleotide-binding oligomerization domain containing 1##NM_006092|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC013937|GGCT|79017|gamma-glutamylcyclotransferase##BC005356|GGCT|79017|gamma-glutamylcyclotransferase##AK315608|GGCT|79017|gamma-glutamylcyclotransferase##BC019243|GGCT|79017|gamma-glutamylcyclotransferase##BC000625|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199815|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199816|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199817|GGCT|79017|gamma-glutamylcyclotransferase##NM_024051|GGCT|79017|gamma-glutamylcyclotransferase##NM_002047|GARS|2617|glycyl-tRNA synthetase	0.982976	CTCF.p2:0:0.983
chr12	14320084	14320202	reg1008571.p1	10.996	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-187157	-	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-970414	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-970426	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	198492	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	218129	+	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	400466	-	BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1	0.822183	CTCF.p2:16:0.822
chr15	44512021	44512131	reg1008422.p2	10.996	+	AK090572 AX746516 TSC_hg19_v1_chr15_-_44487470	-24607	-	BC043486 CU691018 BC007796 BC053647 NM_032892 TSC_hg19_v1_chr15_-_44487448	-24726	-	NM_001167941 NM_024908 TSC_hg19_v1_chr15_+_44119199 AK290933 BC025247 AK023035 BC051855 EF011624 CU690868	-392889	+	TSC_hg19_v1_chr15_+_44580919 NM_138423 NM_177974 BC012124	68823	+	AK098265 TSC_hg19_v1_chr15_+_44580937	68865	+	BC063480 AY358086 TSC_hg19_v1_chr15_+_44580965	68883	+	AK090572|FRMD5|84978|FERM domain containing 5##BC043486|FRMD5|84978|FERM domain containing 5##BC007796|FRMD5|84978|FERM domain containing 5##BC053647|FRMD5|84978|FERM domain containing 5##NM_032892|FRMD5|84978|FERM domain containing 5##NM_001167941|WDR76|79968|WD repeat domain 76##NM_024908|WDR76|79968|WD repeat domain 76##AK290933|WDR76|79968|WD repeat domain 76##BC025247|WDR76|79968|WD repeat domain 76##AK023035|WDR76|79968|WD repeat domain 76##BC051855|WDR76|79968|WD repeat domain 76##EF011624|WDR76|79968|WD repeat domain 76##NM_138423|CASC4|113201|cancer susceptibility candidate 4##NM_177974|CASC4|113201|cancer susceptibility candidate 4##BC012124|CASC4|113201|cancer susceptibility candidate 4##AK098265|CASC4|113201|cancer susceptibility candidate 4##BC063480|CASC4|113201|cancer susceptibility candidate 4##AY358086|CASC4|113201|cancer susceptibility candidate 4	0.787194	CTCF.p2:6:0.787
chr17	57407061	57407180	reg1008404.p1	10.996	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	-109222	+	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	-119723	+	AK225380 TSC_hg19_v1_chr17_+_57233106 AK001891 AK225377 FJ161961 BC008669	-174000	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	1898	+	AF461690 NM_001166301 NM_024612 TSC_hg19_v1_chr17_+_57642970 BC024187 AK299151 AK095681 AF260270 AK226048 AB384723 DQ890909 DQ894060	235867	+	TSC_hg19_v1_chr17_+_57697037 NM_004859	289925	+	NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK225380|PRR11|55771|proline rich 11##AK001891|PRR11|55771|proline rich 11##AK225377|PRR11|55771|proline rich 11##FJ161961|PRR11|55771|proline rich 11##BC008669|PRR11|55771|proline rich 11##NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)##AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_004859|CLTC|1213|clathrin, heavy chain (Hc)	0.0	
chr7	18395902	18396005	reg1007531.p1	10.996	+	AK097178 TSC_hg19_v1_chr7_+_18330071	-65894	+	TSC_hg19_v1_chr7_+_18126583 AK304298 NM_001204144	-269362	+	BC062797 BC005309 M57423 NM_175886	-328488	-	TSC_hg19_v1_chr7_+_18535361 BC092441 BC150328 AB018287 AJ459808 BC152405 NM_001204145 NM_001204146 NM_014707 NM_178423 AK297404 AK316109 AY429540	139446	+	CR749550 EU832154 EU832248 TSC_hg19_v1_chr7_+_18535882 NM_058176 NM_178425 AB385379 AY032737 AY032738 AY197371 EU832247 BC111735	139918	+	NM_001204147 NM_001204148 TSC_hg19_v1_chr7_+_18548932 AK304410	152970	+	AK097178|HDAC9|9734|histone deacetylase 9##AK304298|HDAC9|9734|histone deacetylase 9##NM_001204144|HDAC9|9734|histone deacetylase 9##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC150328|HDAC9|9734|histone deacetylase 9##AB018287|HDAC9|9734|histone deacetylase 9##AJ459808|HDAC9|9734|histone deacetylase 9##BC152405|HDAC9|9734|histone deacetylase 9##NM_001204145|HDAC9|9734|histone deacetylase 9##NM_001204146|HDAC9|9734|histone deacetylase 9##NM_014707|HDAC9|9734|histone deacetylase 9##NM_178423|HDAC9|9734|histone deacetylase 9##AK297404|HDAC9|9734|histone deacetylase 9##AK316109|HDAC9|9734|histone deacetylase 9##AY429540|HDAC9|9734|histone deacetylase 9##CR749550|HDAC9|9734|histone deacetylase 9##EU832154|HDAC9|9734|histone deacetylase 9##EU832248|HDAC9|9734|histone deacetylase 9##NM_058176|HDAC9|9734|histone deacetylase 9##NM_178425|HDAC9|9734|histone deacetylase 9##AY032737|HDAC9|9734|histone deacetylase 9##AY032738|HDAC9|9734|histone deacetylase 9##AY197371|HDAC9|9734|histone deacetylase 9##EU832247|HDAC9|9734|histone deacetylase 9##BC111735|HDAC9|9734|histone deacetylase 9##NM_001204147|HDAC9|9734|histone deacetylase 9##NM_001204148|HDAC9|9734|histone deacetylase 9##AK304410|HDAC9|9734|histone deacetylase 9	0.997998	CTCF.p2:12:0.998
chr15	41314793	41314935	reg1010798.p1	10.995	+	NM_001142776 NM_024111 TSC_hg19_v1_chr15_+_41245671 BC019625 BC001683 BC001847 AY702027	-69160	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	-93166	+	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	-128164	+	TSC_hg19_v1_chr15_-_41364176 AK057582	49340	-	BC144681 AB033085 NM_017553 BC146785 TSC_hg19_v1_chr15_-_41408344	93473	-	TSC_hg19_v1_chr15_-_41408423 BC012578	93569	-	NM_001142776|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##NM_024111|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC019625|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001683|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001847|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AY702027|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)##AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AK057582|INO80|54617|INO80 homolog (S. cerevisiae)##BC144681|INO80|54617|INO80 homolog (S. cerevisiae)##AB033085|INO80|54617|INO80 homolog (S. cerevisiae)##NM_017553|INO80|54617|INO80 homolog (S. cerevisiae)##BC146785|INO80|54617|INO80 homolog (S. cerevisiae)##BC012578|INO80|54617|INO80 homolog (S. cerevisiae)	0.227691	CTCF.p2:-87:0.215
chr17	12570791	12570918	reg1010844.p1	10.995	+	TSC_hg19_v1_chr17_+_12569389 BC126307 BC143391 AF532596	-1420	+	AK128608 TSC_hg19_v1_chr17_+_12569334 AK292885	-1533	+	NM_001146312 NM_153604 TSC_hg19_v1_chr17_+_12569210 AY764180	-1645	+	AK097821 NM_001146313	52751	+	TSC_hg19_v1_chr17_+_12692837 NM_014859 AB014572	121963	+	TSC_hg19_v1_chr17_-_12921295 AK300011 AF304370 CR457261 CU674942	350422	-	BC126307|MYOCD|93649|myocardin##BC143391|MYOCD|93649|myocardin##AF532596|MYOCD|93649|myocardin##AK128608|MYOCD|93649|myocardin##AK292885|MYOCD|93649|myocardin##NM_001146312|MYOCD|93649|myocardin##NM_153604|MYOCD|93649|myocardin##AY764180|MYOCD|93649|myocardin##AK097821|MYOCD|93649|myocardin##NM_001146313|MYOCD|93649|myocardin##NM_014859|ARHGAP44|9912|Rho GTPase activating protein 44##AB014572|ARHGAP44|9912|Rho GTPase activating protein 44##AK300011|ELAC2|60528|elaC homolog 2 (E. coli)##AF304370|ELAC2|60528|elaC homolog 2 (E. coli)##CR457261|ELAC2|60528|elaC homolog 2 (E. coli)	0.0	
chr1	170734979	170735107	reg1009564.p2	10.994	+	BC074993 NM_006902 NM_022716 EU446648 AB527492 AB451463 TSC_hg19_v1_chr1_+_170633380 M95929	-101681	+	TSC_hg19_v1_chr1_+_170632302 AK225968	-102753	+	TSC_hg19_v1_chr1_+_170501309 AK308339 NM_001146039 NM_152281 AK021814 BC064945 CU687974 BC047476 AK057661	-233740	+	NM_001163629 NM_025063 AK027203 BC113390 BC113392	169604	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	324998	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	419379	+	BC074993|PRRX1|5396|paired related homeobox 1##NM_006902|PRRX1|5396|paired related homeobox 1##NM_022716|PRRX1|5396|paired related homeobox 1##EU446648|PRRX1|5396|paired related homeobox 1##AB451463|PRRX1|5396|paired related homeobox 1##AK225968|PRRX1|5396|paired related homeobox 1##AK308339|GORAB|92344|golgin, RAB6-interacting##NM_001146039|GORAB|92344|golgin, RAB6-interacting##NM_152281|GORAB|92344|golgin, RAB6-interacting##AK021814|GORAB|92344|golgin, RAB6-interacting##BC064945|GORAB|92344|golgin, RAB6-interacting##BC047476|GORAB|92344|golgin, RAB6-interacting##AK057661|GORAB|92344|golgin, RAB6-interacting##NM_001163629|C1orf129|80133|chromosome 1 open reading frame 129##NM_025063|C1orf129|80133|chromosome 1 open reading frame 129##AK027203|C1orf129|80133|chromosome 1 open reading frame 129##BC113390|C1orf129|80133|chromosome 1 open reading frame 129##BC113392|C1orf129|80133|chromosome 1 open reading frame 129##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	0.048624	
chr12	110291030	110291157	reg1009695.p1	10.994	+	BC117426 BC143307 BC143315 TSC_hg19_v1_chr12_-_110271207 AJ296305 NM_021625	-19885	-	TSC_hg19_v1_chr12_-_110271182 AL834192	-19906	-	AB073669 AB100308 AF258465 AF263523 DQ059644 DQ059645 DQ059646 NM_001177431 AB590809 NM_001177428 NM_001177433 NM_147204 AB032427	-38446	-	AY372530 AY372531 CU679533 AK313457 AF209704 TSC_hg19_v1_chr12_-_110318304 AY372532 BC009932 NM_016433	27185	-	TSC_hg19_v1_chr12_+_110338090 AK092736 AX747696 NM_001143852 BC004285 AK301262	47009	+	AY007230 NM_032300 BC022838	47278	+	BC117426|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143307|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143315|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AJ296305|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_021625|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AL834192|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB073669|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB100308|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AF258465|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AF263523|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059644|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059645|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059646|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177431|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177428|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177433|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_147204|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB032427|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AY372530|GLTP|51228|glycolipid transfer protein##AY372531|GLTP|51228|glycolipid transfer protein##AK313457|GLTP|51228|glycolipid transfer protein##AF209704|GLTP|51228|glycolipid transfer protein##AY372532|GLTP|51228|glycolipid transfer protein##BC009932|GLTP|51228|glycolipid transfer protein##NM_016433|GLTP|51228|glycolipid transfer protein##AK092736|TCHP|84260|trichoplein, keratin filament binding##NM_001143852|TCHP|84260|trichoplein, keratin filament binding##BC004285|TCHP|84260|trichoplein, keratin filament binding##AK301262|TCHP|84260|trichoplein, keratin filament binding##AY007230|TCHP|84260|trichoplein, keratin filament binding##NM_032300|TCHP|84260|trichoplein, keratin filament binding##BC022838|TCHP|84260|trichoplein, keratin filament binding	0.0	
chr5	168175431	168175569	reg1010195.p1	10.994	+	TSC_hg19_v1_chr5_-_168006609 BC013705 NM_024594	-168985	-	TSC_hg19_v1_chr5_-_168006352 AK223285 AK022961	-169149	-	TSC_hg19_v1_chr5_+_167956546 AX721195	-218883	+	TSC_hg19_v1_chr5_-_168271862 BC023515	96359	-	AB383998 AK310549 TSC_hg19_v1_chr5_-_168728144 BC142665 BC142717 AY358884 AB017169 BC098388 AB011538 BC146759 NM_003062	552458	-	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	835221	+	BC013705|PANK3|79646|pantothenate kinase 3##NM_024594|PANK3|79646|pantothenate kinase 3##AK223285|PANK3|79646|pantothenate kinase 3##AK022961|PANK3|79646|pantothenate kinase 3##AK310549|SLIT3|6586|slit homolog 3 (Drosophila)##BC142665|SLIT3|6586|slit homolog 3 (Drosophila)##BC142717|SLIT3|6586|slit homolog 3 (Drosophila)##AY358884|SLIT3|6586|slit homolog 3 (Drosophila)##AB017169|SLIT3|6586|slit homolog 3 (Drosophila)##BC098388|SLIT3|6586|slit homolog 3 (Drosophila)##AB011538|SLIT3|6586|slit homolog 3 (Drosophila)##BC146759|SLIT3|6586|slit homolog 3 (Drosophila)##NM_003062|SLIT3|6586|slit homolog 3 (Drosophila)##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99	0.90909	CTCF.p2:-9:0.909
chr9	131201032	131201141	reg1009172.p1	10.994	+	BC011811 TSC_hg19_v1_chr9_+_131191208	-9876	+	AK074519 AK074523 AF177203 TSC_hg19_v1_chr9_+_131185231	-15901	+	TSC_hg19_v1_chr9_+_131183225 BC119698 BC119699	-17831	+	NM_153436 AK301842	16363	+	TSC_hg19_v1_chr9_+_131218395 NM_001242352 NM_001242353 NM_001242354 NM_002540 NM_153432 NM_153435 NM_153439 AK093367 AK301754	17252	+	TSC_hg19_v1_chr9_+_131218424 AY366499	17327	+	BC011811|CERCAM|51148|cerebral endothelial cell adhesion molecule##AK074519|CERCAM|51148|cerebral endothelial cell adhesion molecule##AK074523|CERCAM|51148|cerebral endothelial cell adhesion molecule##AF177203|CERCAM|51148|cerebral endothelial cell adhesion molecule##BC119698|CERCAM|51148|cerebral endothelial cell adhesion molecule##BC119699|CERCAM|51148|cerebral endothelial cell adhesion molecule##NM_153436|ODF2|4957|outer dense fiber of sperm tails 2##AK301842|ODF2|4957|outer dense fiber of sperm tails 2##NM_001242352|ODF2|4957|outer dense fiber of sperm tails 2##NM_001242353|ODF2|4957|outer dense fiber of sperm tails 2##NM_001242354|ODF2|4957|outer dense fiber of sperm tails 2##NM_002540|ODF2|4957|outer dense fiber of sperm tails 2##NM_153432|ODF2|4957|outer dense fiber of sperm tails 2##NM_153435|ODF2|4957|outer dense fiber of sperm tails 2##NM_153439|ODF2|4957|outer dense fiber of sperm tails 2##AK093367|ODF2|4957|outer dense fiber of sperm tails 2##AK301754|ODF2|4957|outer dense fiber of sperm tails 2##AY366499|ODF2|4957|outer dense fiber of sperm tails 2	0.999852	CTCF.p2:-2:1.000
chr5	137078852	137078964	reg1010349.p1	10.993	+	AK098190 BC034035 NM_017415 TSC_hg19_v1_chr5_-_137071807	-7147	-	AF208068 AK314707 TSC_hg19_v1_chr5_-_137071541 AB032955	-7403	-	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	-243928	-	TSC_hg19_v1_chr5_-_137088952 BC012490	10048	-	L10372 TSC_hg19_v1_chr5_-_137089473	10547	-	AB528924 CR456986 BC007271 BC009284 TSC_hg19_v1_chr5_-_137089840	10895	-	BC034035|KLHL3|26249|kelch-like 3 (Drosophila)##NM_017415|KLHL3|26249|kelch-like 3 (Drosophila)##AF208068|KLHL3|26249|kelch-like 3 (Drosophila)##AK314707|KLHL3|26249|kelch-like 3 (Drosophila)##AB032955|KLHL3|26249|kelch-like 3 (Drosophila)##AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC012490|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##L10372|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##CR456986|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC007271|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC009284|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	0.999929	CTCF.p2:2:1.000
chr17	7418192	7418347	reg1008906.p2	10.992	+	TSC_hg19_v1_chr17_+_7388113 CU688278	-30153	+	TSC_hg19_v1_chr17_+_7387773 BC137231 BC067295	-30414	+	AK293777 TSC_hg19_v1_chr17_+_7387688 NM_000937 X63564	-30577	+	BC019047 NM_003809 NM_172089 BC071837 AF055872 AY358870 AY081051 BC104420 AF030099	34144	+	TSC_hg19_v1_chr17_+_7461620 NM_001198622 NM_001198623 NM_001198624 NM_003808 NM_172087 NM_172088	43347	+	AK225556 AK314518 AK301221 AF046888 AF114011 AY081050 AF114013 AF114012 AF184972 AY358880 BC008042 TSC_hg19_v1_chr17_+_7462318 DQ149579 EF211088 EU831984 EU832077 AF136294 BT019561 BT019562 CR542040 CR542073	43941	+	BC137231|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##BC067295|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##AK293777|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##NM_000937|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##X63564|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##BC019047|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_003809|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_172089|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough##BC071837|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AF055872|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AY358870|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AY081051|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough##BC104420|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AF030099|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_001198622|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198623|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198624|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_003808|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_172087|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_172088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK225556|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK314518|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK301221|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF046888|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114011|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AY081050|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114013|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114012|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF184972|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AY358880|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BC008042|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##DQ149579|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EF211088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EU831984|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EU832077|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF136294|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BT019561|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BT019562|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##CR542040|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##CR542073|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	0.107467	
chr22	39513990	39514145	reg1008815.p2	10.992	+	NM_001166002 NM_001166003 NM_001166004 NM_181773 BC069023 CR456481	-20797	+	AK092614 NM_021822 AK315650 BC061914 AF182420 CR456472 BC009683 BC024268 AB266487 AB462950 CU013022 CU013310 CU692904 JF262036	-40880	+	AK294810 NM_001006666 NM_145298	-77427	+	TSC_hg19_v1_chr22_-_39529023 BC128418	14980	-	DQ064603 AB528611 EU446785 CU690844 BC051773 TSC_hg19_v1_chr22_-_39548584 NM_175709 AK124408	34500	-	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	122842	-	NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##AK092614|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_021822|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK315650|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC061914|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AF182420|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CR456472|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC009683|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC024268|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AB266487|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013022|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013310|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##JF262036|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK294810|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_001006666|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_145298|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##BC128418|CBX7|23492|chromobox homolog 7##DQ064603|CBX7|23492|chromobox homolog 7##EU446785|CBX7|23492|chromobox homolog 7##BC051773|CBX7|23492|chromobox homolog 7##NM_175709|CBX7|23492|chromobox homolog 7##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide	0.994611	CTCF.p2:18:0.995
chr12	31000267	31000405	reg1010103.p1	10.991	+	AY074490 AY074491 NM_001002259 NM_001206856 NM_023925 NM_032156	-92889	-	TSC_hg19_v1_chr12_-_30848807 NM_006390	-151470	-	U77494 TSC_hg19_v1_chr12_-_30848794	-151566	-	TSC_hg19_v1_chr12_+_31079362 BC084571	79025	+	TSC_hg19_v1_chr12_+_31079681 AK293947	79324	+	AK300920 NM_001080509 TSC_hg19_v1_chr12_+_31079866 BC146917 BC146922	79528	+	AY074490|CAPRIN2|65981|caprin family member 2##AY074491|CAPRIN2|65981|caprin family member 2##NM_001002259|CAPRIN2|65981|caprin family member 2##NM_001206856|CAPRIN2|65981|caprin family member 2##NM_023925|CAPRIN2|65981|caprin family member 2##NM_032156|CAPRIN2|65981|caprin family member 2##NM_006390|IPO8|10526|importin 8##U77494|IPO8|10526|importin 8##AK293947|TSPAN11|441631|tetraspanin 11##AK300920|TSPAN11|441631|tetraspanin 11##NM_001080509|TSPAN11|441631|tetraspanin 11##BC146917|TSPAN11|441631|tetraspanin 11##BC146922|TSPAN11|441631|tetraspanin 11	0.896818	CTCF.p2:-32:0.897
chr15	89167718	89167822	reg1008518.p2	10.991	+	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	-3200	+	BC109060 BC109061 BC073867 AK054603 BC064591 AB073887 NM_001144074 NM_017996	-77919	-	TSC_hg19_v1_chr15_+_89010935 BC032378 BC012489 AK027059 AK026165 AK222933 AK315407 AK223152 BC000200 CU680342 CU689362 DQ891586 DQ894780 BC009451	-156844	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	14416	+	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	178916	+	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	271028	-	NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC032378|MRPS11|64963|mitochondrial ribosomal protein S11##BC012489|MRPS11|64963|mitochondrial ribosomal protein S11##AK027059|MRPS11|64963|mitochondrial ribosomal protein S11##AK026165|MRPS11|64963|mitochondrial ribosomal protein S11##AK222933|MRPS11|64963|mitochondrial ribosomal protein S11##AK315407|MRPS11|64963|mitochondrial ribosomal protein S11##AK223152|MRPS11|64963|mitochondrial ribosomal protein S11##BC000200|MRPS11|64963|mitochondrial ribosomal protein S11##DQ891586|MRPS11|64963|mitochondrial ribosomal protein S11##DQ894780|MRPS11|64963|mitochondrial ribosomal protein S11##BC009451|MRPS11|64963|mitochondrial ribosomal protein S11##BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3	0.0	
chr17	5490900	5491017	reg1008499.p1	10.991	+	AF298548 TSC_hg19_v1_chr17_-_5487785 AF310105 AB023143 BC028066 BC051787 AK310936 NM_001033053 NM_014922 NM_033004 NM_033006 NM_033007	-3159	-	AF217966 AF131825 NM_001162371 TSC_hg19_v1_chr17_-_5404327	-86642	-	AK289939 AL136906 NM_024039	-100729	+	AK309645 TSC_hg19_v1_chr17_+_5972435 AK289603	481472	+	TSC_hg19_v1_chr17_+_5973700 AL833730 NM_015253	482849	+	TSC_hg19_v1_chr17_+_5974408 BC009975	483459	+	AF298548|NLRP1|22861|NLR family, pyrin domain containing 1##AF310105|NLRP1|22861|NLR family, pyrin domain containing 1##AB023143|NLRP1|22861|NLR family, pyrin domain containing 1##AK310936|NLRP1|22861|NLR family, pyrin domain containing 1##NM_001033053|NLRP1|22861|NLR family, pyrin domain containing 1##NM_014922|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033004|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033006|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033007|NLRP1|22861|NLR family, pyrin domain containing 1##AF217966|LOC728392|728392|uncharacterized LOC728392##AF131825|LOC728392|728392|uncharacterized LOC728392##NM_001162371|LOC728392|728392|uncharacterized LOC728392##AK289939|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AL136906|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##NM_024039|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AK309645|WSCD1|23302|WSC domain containing 1##AK289603|WSCD1|23302|WSC domain containing 1##AL833730|WSCD1|23302|WSC domain containing 1##NM_015253|WSCD1|23302|WSC domain containing 1##BC009975|WSCD1|23302|WSC domain containing 1	0.999784	CTCF.p2:-12:1.000
chr7	131192747	131192864	reg1008611.p2	10.991	+	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-180166	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	-180199	+	AK294384 NM_001145354	-397951	+	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	48558	-	TSC_hg19_v1_chr7_-_131833385 AL834504	640590	-	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	1000115	-	BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##AL834504|PLXNA4|91584|plexin A4##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4	0.959592	CTCF.p2:-1:0.960
chr9	97680477	97680612	reg1011231.p1	10.991	+	NM_001193329 AJ560639	-158547	+	BC029616 TSC_hg19_v1_chr9_+_97488999	-191541	+	TSC_hg19_v1_chr9_+_97488980 NM_001193331 NM_032823 AK296782 AK057450	-191582	+	AK298959 TSC_hg19_v1_chr9_+_97766501 AK300486	85931	+	X66894 NM_001243743	398976	-	AK312548 AK222871 TSC_hg19_v1_chr9_-_98079974 BC015748 X66893 AK304887 NM_000136 NM_001243744	399387	-	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3##AJ560639|C9orf3|84909|chromosome 9 open reading frame 3##BC029616|C9orf3|84909|chromosome 9 open reading frame 3##NM_001193331|C9orf3|84909|chromosome 9 open reading frame 3##NM_032823|C9orf3|84909|chromosome 9 open reading frame 3##AK296782|C9orf3|84909|chromosome 9 open reading frame 3##AK057450|C9orf3|84909|chromosome 9 open reading frame 3##AK298959|C9orf3|84909|chromosome 9 open reading frame 3##AK300486|C9orf3|84909|chromosome 9 open reading frame 3##X66894|FANCC|2176|Fanconi anemia, complementation group C##NM_001243743|FANCC|2176|Fanconi anemia, complementation group C##AK312548|FANCC|2176|Fanconi anemia, complementation group C##AK222871|FANCC|2176|Fanconi anemia, complementation group C##BC015748|FANCC|2176|Fanconi anemia, complementation group C##X66893|FANCC|2176|Fanconi anemia, complementation group C##AK304887|FANCC|2176|Fanconi anemia, complementation group C##NM_000136|FANCC|2176|Fanconi anemia, complementation group C##NM_001243744|FANCC|2176|Fanconi anemia, complementation group C	0.01058	
chr13	92839790	92839889	reg1007911.p1	10.990	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-788935	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-4514970	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-6466400	-	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1039588	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	2291987	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	2408590	-	BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase	0.998737	CTCF.p2:-5:0.999
chr18	46548306	46548464	reg1008341.p2	10.990	+	AF010193 NM_001190821 NM_005904	-71305	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	-71618	-	AK301535 NM_001190822	-72683	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	438666	-	TSC_hg19_v1_chr18_-_47013575 AB097012	465180	-	TSC_hg19_v1_chr18_-_47013599 BC093004	465214	-	AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin##AB097012|C18orf32|497661|chromosome 18 open reading frame 32##BC093004|C18orf32|497661|chromosome 18 open reading frame 32	0.891059	CTCF.p2:-11:0.891
chr5	86365936	86366072	reg1008394.p1	10.989	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	-452187	+	TSC_hg19_v1_chr5_+_85913757 AK026505	-452246	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-2685340	-	TSC_hg19_v1_chr5_+_86563706 CR749722	197681	+	TSC_hg19_v1_chr5_+_86563831 BC131816	197822	+	TSC_hg19_v1_chr5_+_86564085 AB209106 NM_002890 BC033015	198062	+	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.216067	CTCF.p2:-10:0.216
chrX	67952892	67953004	reg1008628.p1	10.989	+	TSC_hg19_v1_chrX_+_67913490 D80011	-39457	+	TSC_hg19_v1_chrX_+_67913480 AK291747 NM_001142504	-39468	+	BC035587 NM_001142503 NM_014725 CR749411	-85389	+	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	95907	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	432358	-	AF087142 NM_015686 BC136518 BC136519	772135	+	D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK291747|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142504|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##BC035587|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142503|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_014725|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##CR749411|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B	0.993173	CTCF.p2:-15:0.993
chr16	89008378	89008469	reg1006833.p1	10.988	+	AB010420 NM_175931	-817	-	AB528852 EU190484 BC130001 BC130002 NM_001080487	-75382	-	TSC_hg19_v1_chr16_+_88923536 NM_016209 AF089106 AX771012 AK311885 BC105809 AK126779 AF161524 AK310805 AX771013 BC018024 AX771014 BC011369	-84900	+	AB527670 EU446890 BC047019 AK314766 AB010419 BC062624 NM_005187 TSC_hg19_v1_chr16_-_89043569	34980	-	TSC_hg19_v1_chr16_-_89119364 AK055272	110946	-	NM_001127214 NM_001243279 NM_174917 TSC_hg19_v1_chr16_+_89160259	151814	+	AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##EU190484|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130001|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130002|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001080487|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_016209|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF089106|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771012|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK311885|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC105809|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK126779|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF161524|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK310805|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771013|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC018024|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771014|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC011369|TRAPPC2L|51693|trafficking protein particle complex 2-like##EU446890|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC047019|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AK314766|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010419|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC062624|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_005187|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_001127214|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001243279|ACSF3|197322|acyl-CoA synthetase family member 3##NM_174917|ACSF3|197322|acyl-CoA synthetase family member 3	0.653804	CTCF.p2:-24:0.654
chr18	64867573	64867726	reg1010819.p1	10.988	+	AJ007607 NM_021153 AK304000 AK315257 BC015877	-596338	-	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-1449447	+	TSC_hg19_v1_chr18_+_63417845 BC036786	-1449783	+	AK021849 TSC_hg19_v1_chr18_-_65182656	314934	-	TSC_hg19_v1_chr18_-_65183956 NM_032160	316297	-	AM393206 AM393295 CU689334 TSC_hg19_v1_chr18_-_66382307 AK307269 AK295551 BC032325 AL832341 AL832356 BC093792 BC093794 BC143400 AB058733	1514617	-	AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AK021849|DSEL|92126|dermatan sulfate epimerase-like##NM_032160|DSEL|92126|dermatan sulfate epimerase-like##AM393206|TMX3|54495|thioredoxin-related transmembrane protein 3##AM393295|TMX3|54495|thioredoxin-related transmembrane protein 3##AK307269|TMX3|54495|thioredoxin-related transmembrane protein 3##AK295551|TMX3|54495|thioredoxin-related transmembrane protein 3##BC032325|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832341|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832356|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093792|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093794|TMX3|54495|thioredoxin-related transmembrane protein 3##BC143400|TMX3|54495|thioredoxin-related transmembrane protein 3##AB058733|TMX3|54495|thioredoxin-related transmembrane protein 3	0.106269	
chr19	11047466	11047571	reg1008260.p1	10.988	+	TSC_hg19_v1_chr19_+_11039470 BC011833 NM_138358 BC007244 BC005075	-8061	+	CU680474 AB463355 AM392632 TSC_hg19_v1_chr19_-_11039312 BC000056 BC013014 NM_024029	-8279	-	TSC_hg19_v1_chr19_+_10982381 AL833242	-65082	+	TSC_hg19_v1_chr19_+_11071705 NM_001128844 NM_003072 AK290033 BC150298 BC139917 BC139924	24128	+	TSC_hg19_v1_chr19_+_11071717 BC007302	24197	+	TSC_hg19_v1_chr19_+_11071720 BC035916	24232	+	BC011833|C19orf52|90580|chromosome 19 open reading frame 52##NM_138358|C19orf52|90580|chromosome 19 open reading frame 52##BC007244|C19orf52|90580|chromosome 19 open reading frame 52##BC005075|C19orf52|90580|chromosome 19 open reading frame 52##AM392632|YIPF2|78992|Yip1 domain family, member 2##BC000056|YIPF2|78992|Yip1 domain family, member 2##BC013014|YIPF2|78992|Yip1 domain family, member 2##NM_024029|YIPF2|78992|Yip1 domain family, member 2##AL833242|CARM1|10498|coactivator-associated arginine methyltransferase 1##NM_001128844|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_003072|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##AK290033|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC150298|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC139917|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC139924|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	0.990584	CTCF.p2:-18:0.991
chr6_mcf_hap5	2946162	2946288	reg1012076.p1	10.988	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999083	CTCF.p2:8:0.999
chr21	40813562	40813672	reg1008272.p1	10.987	+	TSC_hg19_v1_chr21_+_40759717 AK310268 NM_001146218 BC111393 AK299144	-53900	+	TSC_hg19_v1_chr21_+_40752270 Y12478 AK293866 BC012415	-61344	+	TSC_hg19_v1_chr21_+_40752257 AK299245 AK297186 AK293113	-61368	+	BC031059 NM_152505	2510	-	BC043006 BC026122 TSC_hg19_v1_chr21_-_40817675	4053	-	TSC_hg19_v1_chr21_+_40817797 NM_001001713	4178	+	AK310268|WRB|7485|tryptophan rich basic protein##NM_001146218|WRB|7485|tryptophan rich basic protein##BC111393|WRB|7485|tryptophan rich basic protein##AK299144|WRB|7485|tryptophan rich basic protein##Y12478|WRB|7485|tryptophan rich basic protein##AK293866|WRB|7485|tryptophan rich basic protein##BC012415|WRB|7485|tryptophan rich basic protein##AK299245|WRB|7485|tryptophan rich basic protein##AK297186|WRB|7485|tryptophan rich basic protein##AK293113|WRB|7485|tryptophan rich basic protein##BC031059|LCA5L|150082|Leber congenital amaurosis 5-like##NM_152505|LCA5L|150082|Leber congenital amaurosis 5-like##BC043006|LCA5L|150082|Leber congenital amaurosis 5-like##BC026122|LCA5L|150082|Leber congenital amaurosis 5-like##NM_001001713|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein	0.668956	CTCF.p2:7:0.606
chr2	75292183	75292324	reg1011077.p1	10.987	+	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-106468	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-230002	-	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	-230993	+	AK289765 NM_001058 NM_015727	134375	-	BC016157 TSC_hg19_v1_chr2_-_75788066	495794	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	495837	-	NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2##AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A	0.9996	CTCF.p2:0:1.000
chr1	75731500	75731632	reg1008786.p1	10.986	+	NM_001001933 BC040321	-137447	+	NM_001130042 NM_001130043 NM_001134759 NM_001889	-532475	-	NM_001162916 AK098237 BC071765 NM_138467 AK294264 AK299849 BC009514 AK311272 AB590606	-532686	+	AK128063 BC028743 BC034580 BC051740 NM_001130058 NM_152697 AK093170 AX747970	345215	-	AK299573 TSC_hg19_v1_chr1_-_76081791	350180	-	NM_000016 NM_001127328 TSC_hg19_v1_chr1_+_76190106	458508	+	NM_001001933|LHX8|431707|LIM homeobox 8##BC040321|LHX8|431707|LIM homeobox 8##NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001162916|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK098237|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC071765|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##NM_138467|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK294264|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK299849|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC009514|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK311272|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK128063|SLC44A5|204962|solute carrier family 44, member 5##BC028743|SLC44A5|204962|solute carrier family 44, member 5##BC034580|SLC44A5|204962|solute carrier family 44, member 5##BC051740|SLC44A5|204962|solute carrier family 44, member 5##NM_001130058|SLC44A5|204962|solute carrier family 44, member 5##NM_152697|SLC44A5|204962|solute carrier family 44, member 5##AK093170|SLC44A5|204962|solute carrier family 44, member 5##AK299573|SLC44A5|204962|solute carrier family 44, member 5##NM_000016|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##NM_001127328|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain	0.993816	CTCF.p2:0:0.994
chr19	7746713	7746833	reg1009350.p2	10.986	+	TSC_hg19_v1_chr19_+_7745742 BC042161 NM_174894 NM_001042461 BC022836	-1018	+	NM_001042462 TSC_hg19_v1_chr19_+_7745726 AK292001	-1056	+	TSC_hg19_v1_chr19_+_7741975 BC104796 BC104798 NM_174918 AF461156 BC035847	-4806	+	TSC_hg19_v1_chr19_-_7764328 NM_001207019	17553	-	BC064417 BC062591 AK223207 BC014108 M14766 TSC_hg19_v1_chr19_-_7767004 AK310707 AK310071 M15059 NM_001220500 NM_002002 X04772	20231	-	AY203939 BC093691 BC093693 BC143309 AY423706 NM_001244856 NM_198492	50243	-	BC042161|TRAPPC5|126003|trafficking protein particle complex 5##NM_174894|TRAPPC5|126003|trafficking protein particle complex 5##NM_001042461|TRAPPC5|126003|trafficking protein particle complex 5##BC022836|TRAPPC5|126003|trafficking protein particle complex 5##NM_001042462|TRAPPC5|126003|trafficking protein particle complex 5##AK292001|TRAPPC5|126003|trafficking protein particle complex 5##BC104796|C19orf59|199675|chromosome 19 open reading frame 59##BC104798|C19orf59|199675|chromosome 19 open reading frame 59##NM_174918|C19orf59|199675|chromosome 19 open reading frame 59##AF461156|C19orf59|199675|chromosome 19 open reading frame 59##BC035847|C19orf59|199675|chromosome 19 open reading frame 59##NM_001207019|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC064417|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC062591|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK223207|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC014108|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M14766|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310707|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310071|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M15059|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_001220500|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_002002|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##X04772|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AY203939|CLEC4G|339390|C-type lectin domain family 4, member G##BC093691|CLEC4G|339390|C-type lectin domain family 4, member G##BC093693|CLEC4G|339390|C-type lectin domain family 4, member G##BC143309|CLEC4G|339390|C-type lectin domain family 4, member G##AY423706|CLEC4G|339390|C-type lectin domain family 4, member G##NM_001244856|CLEC4G|339390|C-type lectin domain family 4, member G##NM_198492|CLEC4G|339390|C-type lectin domain family 4, member G	0.692251	CTCF.p2:-4:0.645
chr22	39910468	39910649	reg1009015.p1	10.986	+	TSC_hg19_v1_chr22_+_39898401 BC008327 AK290954	-12160	+	TSC_hg19_v1_chr22_+_39898366 AK026539	-12193	+	TSC_hg19_v1_chr22_+_39898363 AL365515	-12199	+	AK296028 TSC_hg19_v1_chr22_+_39916566 AK057751 D90209 NM_001675 NM_182810 BC008090 BC022088 BC011994 BC024775 BC016855 BC073754 BC044895 BC073990	6036	+	TSC_hg19_v1_chr22_-_39928750 CU013041 CU013329	18142	-	BC047711 TSC_hg19_v1_chr22_-_39928752 AK025423	18193	-	BC008327|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AK290954|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AK026539|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL365515|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AK296028|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##AK057751|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##D90209|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##NM_001675|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##NM_182810|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC008090|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC022088|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC011994|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC024775|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC016855|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC073754|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC044895|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##BC073990|ATF4|468|activating transcription factor 4 (tax-responsive enhancer element B67)##CU013041|RPS19BP1|91582|ribosomal protein S19 binding protein 1##CU013329|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC047711|RPS19BP1|91582|ribosomal protein S19 binding protein 1##AK025423|RPS19BP1|91582|ribosomal protein S19 binding protein 1	0.0	
chr1	150138316	150138428	reg1007551.p2	10.985	+	TSC_hg19_v1_chr1_+_150122415 AB464030 AK222921 CU679641 DQ893381 DQ896780 AF073836	-15934	+	TSC_hg19_v1_chr1_+_150122268 AF217956 AF168676 BC010149	-16068	+	TSC_hg19_v1_chr1_+_150122120 AK302255 AF192912 AF291105 NM_016274	-16240	+	AK095228 NM_001136479	68653	-	AB528764 AM393076 AL833660 TSC_hg19_v1_chr1_-_150208332 AK303333 BC003380 AL832664 AK303392 AK223469	69895	-	AY057381 TSC_hg19_v1_chr1_-_150208461 AK092672 AX747663	70079	-	AK222921|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ893381|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ896780|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF073836|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF217956|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF168676|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##BC010149|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AK302255|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF192912|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF291105|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##NM_016274|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AK095228|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##NM_001136479|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AM393076|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL833660|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303333|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##BC003380|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL832664|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303392|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK223469|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AY057381|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK092672|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	0.771353	CTCF.p2:4:0.771
chr11	74743150	74743258	reg1008201.p1	10.985	+	TSC_hg19_v1_chr11_+_74699955 NM_006656 AK022450 AK290442 AK303540	-43240	+	TSC_hg19_v1_chr11_+_74660321 BC064957 BC106066 AB587348 CU687980 D14658	-82864	+	TSC_hg19_v1_chr11_+_74660317 BC067821	-82886	+	NM_001005285 BC136958 BC136959	57573	-	NM_001145212 NM_007256 FM209050 TSC_hg19_v1_chr11_+_74862151 AK304783 AK302492 AK290234 AK300134 AB020687 BC127254 BC041095 AB026256 AL117465	118940	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	127637	+	NM_006656|NEU3|10825|sialidase 3 (membrane sialidase)##AK022450|NEU3|10825|sialidase 3 (membrane sialidase)##AK290442|NEU3|10825|sialidase 3 (membrane sialidase)##AK303540|NEU3|10825|sialidase 3 (membrane sialidase)##BC064957|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##BC106066|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##D14658|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##BC067821|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##NM_001005285|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##BC136958|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##BC136959|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##NM_001145212|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_007256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209050|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK304783|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK302492|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK290234|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK300134|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB020687|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC127254|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC041095|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB026256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AL117465|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1	0.984949	CTCF.p2:4:0.985
chr10	92622792	92622917	reg1008890.p1	10.984	+	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	-5121	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	-5408	-	TSC_hg19_v1_chr10_+_91498725 AK025628	-1124087	+	TSC_hg19_v1_chr10_+_92631241 BC006991	8403	+	TSC_hg19_v1_chr10_+_92631730 NM_001104546 NM_006413 AL833628 AK296196 U77665 AK312900 AK225532 DQ893181 DQ896488	8868	+	AB528537 DQ892852 DQ896099 AY903446 BC005191 AK290960 BC018667 TSC_hg19_v1_chr10_-_92680845	57962	-	BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK025628|KIF20B|9585|kinesin family member 20B##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit##NM_001104546|RPP30|10556|ribonuclease P/MRP 30kDa subunit##NM_006413|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AL833628|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK296196|RPP30|10556|ribonuclease P/MRP 30kDa subunit##U77665|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK312900|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK225532|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ893181|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ896488|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	0.248279	CTCF.p2:9:0.248
chr16	55978331	55978457	reg1009519.p1	10.984	+	AY907669 BC069548 BC069501 BC117126 BC143692 AK056109 NM_001143685 NM_145024	-69150	-	BC110338 TSC_hg19_v1_chr16_-_55867027 AB119996 AB119995 BC012418 AK290623 AK292209 NM_001025194 NM_001025195 NM_001266	-111349	-	DQ891472 DQ894656 AK301651 AB025026 TSC_hg19_v1_chr16_-_55867009 M73499 S73751 AF177775 BC009706 AY268104 L07764	-111401	-	AK294334 NM_001190158	11548	-	NM_020988 NM_138736 TSC_hg19_v1_chr16_+_56225253	246857	+	AK056008 TSC_hg19_v1_chr16_+_56225314	246916	+	AY907669|CES5A|221223|carboxylesterase 5A##BC069548|CES5A|221223|carboxylesterase 5A##BC069501|CES5A|221223|carboxylesterase 5A##BC117126|CES5A|221223|carboxylesterase 5A##BC143692|CES5A|221223|carboxylesterase 5A##AK056109|CES5A|221223|carboxylesterase 5A##NM_001143685|CES5A|221223|carboxylesterase 5A##NM_145024|CES5A|221223|carboxylesterase 5A##BC110338|CES1|1066|carboxylesterase 1##AB119996|CES1|1066|carboxylesterase 1##AB119995|CES1|1066|carboxylesterase 1##BC012418|CES1|1066|carboxylesterase 1##AK290623|CES1|1066|carboxylesterase 1##AK292209|CES1|1066|carboxylesterase 1##NM_001025194|CES1|1066|carboxylesterase 1##NM_001025195|CES1|1066|carboxylesterase 1##NM_001266|CES1|1066|carboxylesterase 1##DQ891472|CES1|1066|carboxylesterase 1##DQ894656|CES1|1066|carboxylesterase 1##AK301651|CES1|1066|carboxylesterase 1##AB025026|CES1|1066|carboxylesterase 1##M73499|CES1|1066|carboxylesterase 1##S73751|CES1|1066|carboxylesterase 1##AF177775|CES1|1066|carboxylesterase 1##BC009706|CES1|1066|carboxylesterase 1##AY268104|CES1|1066|carboxylesterase 1##L07764|CES1|1066|carboxylesterase 1##AK294334|CES5A|221223|carboxylesterase 5A##NM_001190158|CES5A|221223|carboxylesterase 5A##NM_020988|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_138736|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##AK056008|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O	0.998502	CTCF.p2:-9:0.999
chr19	3146700	3146821	reg1010461.p1	10.984	+	TSC_hg19_v1_chr19_+_3136030 GU727645 NM_002068 M63904 AK300481 AK291329 BC013585 GU727637	-10616	+	TSC_hg19_v1_chr19_+_3122573 BC051315 CU674752	-24155	+	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	-24367	+	NM_003775 TSC_hg19_v1_chr19_+_3178766 BC014970 AJ000479	31992	+	TSC_hg19_v1_chr19_+_3185896 NM_020170	39118	+	AK172848 TSC_hg19_v1_chr19_+_3185938 AK314044 BC010064 BC019091 BC025926	39184	+	GU727645|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_002068|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##M63904|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK300481|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK291329|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC013585|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##GU727637|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##NM_003775|S1PR4|8698|sphingosine-1-phosphate receptor 4##BC014970|S1PR4|8698|sphingosine-1-phosphate receptor 4##AJ000479|S1PR4|8698|sphingosine-1-phosphate receptor 4##NM_020170|NCLN|56926|nicalin##AK172848|NCLN|56926|nicalin##AK314044|NCLN|56926|nicalin##BC010064|NCLN|56926|nicalin##BC019091|NCLN|56926|nicalin##BC025926|NCLN|56926|nicalin	0.995935	CTCF.p2:7:0.996
chr2	64814163	64814292	reg1008259.p1	10.984	+	TSC_hg19_v1_chr2_+_64751580 AL833962	-62625	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	-62743	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	-132579	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	66622	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	66820	-	TSC_hg19_v1_chr2_-_65090764 AK097952	276514	-	AL833962|AFTPH|54812|aftiphilin##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2	0.0	
chr4	155427554	155427680	reg1008194.p1	10.984	+	AK127704 NM_001142552 NM_001142553 TSC_hg19_v1_chr4_-_155412931	-14710	-	TSC_hg19_v1_chr4_-_155412411 AY354498 BC140919	-15135	-	AY354497 NM_017639	-115169	-	BC106004 TSC_hg19_v1_chr4_-_155471547 AK307997 AK304574 BC036046 BC020786 AK002108 NM_001201564 NM_002669	43936	-	AK312972 NM_001184741 NM_005141 AK303788 AK311683 BC106760 TSC_hg19_v1_chr4_+_155484164 BC036007 BC007030 BC020762 BC107766 BC060040 AB527849 AK309592 BC070245 J00129	56545	+	AB527957 BC098280 BC099706 BC099720 BC101935 J00127 AK290559 J00128 BC020764 BC070246 BC105803 TSC_hg19_v1_chr4_-_155511898 NM_000508 NM_021871	84251	-	AK127704|DCHS2|54798|dachsous 2 (Drosophila)##NM_001142552|DCHS2|54798|dachsous 2 (Drosophila)##NM_001142553|DCHS2|54798|dachsous 2 (Drosophila)##AY354498|DCHS2|54798|dachsous 2 (Drosophila)##BC140919|DCHS2|54798|dachsous 2 (Drosophila)##AY354497|DCHS2|54798|dachsous 2 (Drosophila)##NM_017639|DCHS2|54798|dachsous 2 (Drosophila)##BC106004|PLRG1|5356|pleiotropic regulator 1##AK307997|PLRG1|5356|pleiotropic regulator 1##AK304574|PLRG1|5356|pleiotropic regulator 1##BC036046|PLRG1|5356|pleiotropic regulator 1##BC020786|PLRG1|5356|pleiotropic regulator 1##AK002108|PLRG1|5356|pleiotropic regulator 1##NM_001201564|PLRG1|5356|pleiotropic regulator 1##NM_002669|PLRG1|5356|pleiotropic regulator 1##AK312972|FGB|2244|fibrinogen beta chain##NM_001184741|FGB|2244|fibrinogen beta chain##NM_005141|FGB|2244|fibrinogen beta chain##AK303788|FGB|2244|fibrinogen beta chain##AK311683|FGB|2244|fibrinogen beta chain##BC106760|FGB|2244|fibrinogen beta chain##BC036007|FGB|2244|fibrinogen beta chain##BC007030|FGB|2244|fibrinogen beta chain##BC107766|FGB|2244|fibrinogen beta chain##BC060040|FGB|2244|fibrinogen beta chain##AK309592|FGB|2244|fibrinogen beta chain##BC070245|FGB|2244|fibrinogen beta chain##J00129|FGB|2244|fibrinogen beta chain##BC098280|FGA|2243|fibrinogen alpha chain##BC099706|FGA|2243|fibrinogen alpha chain##BC099720|FGA|2243|fibrinogen alpha chain##BC101935|FGA|2243|fibrinogen alpha chain##J00127|FGA|2243|fibrinogen alpha chain##AK290559|FGA|2243|fibrinogen alpha chain##J00128|FGA|2243|fibrinogen alpha chain##BC020764|FGA|2243|fibrinogen alpha chain##BC070246|FGA|2243|fibrinogen alpha chain##BC105803|FGA|2243|fibrinogen alpha chain##NM_000508|FGA|2243|fibrinogen alpha chain##NM_021871|FGA|2243|fibrinogen alpha chain	0.991858	CTCF.p2:7:0.992
chr14	21536708	21536843	reg1009210.p1	10.983	+	BC137537 BC137538 NM_138331	-10760	+	AK292697 NM_032572 AY170392 AJ306608 AJ306609 AJ306610 AY359097 BC112334	-26310	+	BC044831 NM_001012264	-33832	-	TSC_hg19_v1_chr14_+_21538418 BX248768 BC144317 AK074057 BC142692 BC151212 AK126755 NM_018071	1659	+	BC036105 TSC_hg19_v1_chr14_-_21566504	29727	-	TSC_hg19_v1_chr14_-_21566815 AB015427 NM_016423	30043	-	BC137537|RNASE8|122665|ribonuclease, RNase A family, 8##BC137538|RNASE8|122665|ribonuclease, RNase A family, 8##NM_138331|RNASE8|122665|ribonuclease, RNase A family, 8##AK292697|RNASE7|84659|ribonuclease, RNase A family, 7##NM_032572|RNASE7|84659|ribonuclease, RNase A family, 7##AY170392|RNASE7|84659|ribonuclease, RNase A family, 7##AJ306608|RNASE7|84659|ribonuclease, RNase A family, 7##AJ306609|RNASE7|84659|ribonuclease, RNase A family, 7##AJ306610|RNASE7|84659|ribonuclease, RNase A family, 7##AY359097|RNASE7|84659|ribonuclease, RNase A family, 7##BC112334|RNASE7|84659|ribonuclease, RNase A family, 7##BC044831|RNASE13|440163|ribonuclease, RNase A family, 13 (non-active)##NM_001012264|RNASE13|440163|ribonuclease, RNase A family, 13 (non-active)##BX248768|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC144317|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##AK074057|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC142692|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC151212|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##AK126755|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##NM_018071|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC036105|ZNF219|51222|zinc finger protein 219##AB015427|ZNF219|51222|zinc finger protein 219##NM_016423|ZNF219|51222|zinc finger protein 219	0.992845	CTCF.p2:0:0.993
chr7	35664303	35664443	reg1007350.p1	10.983	+	TSC_hg19_v1_chr7_-_35293701 NM_001077653 NM_001166220 DQ986374	-370643	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	-438581	-	DQ287932 NM_015283	-586721	-	TSC_hg19_v1_chr7_-_35734533 BC005091	70223	-	BC020264 TSC_hg19_v1_chr7_-_35734751 AK055708	70366	-	TSC_hg19_v1_chr7_-_35734795 NM_022373	70405	-	NM_001077653|TBX20|57057|T-box 20##NM_001166220|TBX20|57057|T-box 20##DQ986374|TBX20|57057|T-box 20##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC005091|HERPUD2|64224|HERPUD family member 2##BC020264|HERPUD2|64224|HERPUD family member 2##AK055708|HERPUD2|64224|HERPUD family member 2##NM_022373|HERPUD2|64224|HERPUD family member 2	0.350214	CTCF.p2:5:0.350
chr2	17491128	17491256	reg1009020.p1	10.982	+	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	-644048	-	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-1409025	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-1409197	+	DQ860102 NM_001099218	208513	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	230695	+	TSC_hg19_v1_chr2_+_17721989 AF039555 U14747 AB001104	230828	+	BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1##AF039555|VSNL1|7447|visinin-like 1##U14747|VSNL1|7447|visinin-like 1##AB001104|VSNL1|7447|visinin-like 1	0.997593	CTCF.p2:7:0.998
chr6	74442933	74443041	reg1008374.p2	10.982	+	TSC_hg19_v1_chr6_+_74406033 AY149920	-36963	+	EF553520 TSC_hg19_v1_chr6_+_74405925 AY788891 BX641095	-37067	+	TSC_hg19_v1_chr6_+_74405882 AK095888	-37116	+	BC146868 U73778 NM_004370 NM_080645 TSC_hg19_v1_chr6_-_75915745	1472668	-	TSC_hg19_v1_chr6_-_75915768 AK307558	1472793	-	CR407646 CR542125 X15822 TSC_hg19_v1_chr6_-_75953494 BC101826 BC101828 AK312154	1510492	-	AY149920|CD109|135228|CD109 molecule##EF553520|CD109|135228|CD109 molecule##AY788891|CD109|135228|CD109 molecule##BX641095|CD109|135228|CD109 molecule##AK095888|CD109|135228|CD109 molecule##BC146868|COL12A1|1303|collagen, type XII, alpha 1##U73778|COL12A1|1303|collagen, type XII, alpha 1##NM_004370|COL12A1|1303|collagen, type XII, alpha 1##NM_080645|COL12A1|1303|collagen, type XII, alpha 1##AK307558|COL12A1|1303|collagen, type XII, alpha 1##CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	0.928953	CTCF.p2:4:0.929
chr12	49318446	49318589	reg1011037.p1	10.980	+	NM_033124 AK302082 AK093051 AX747886 AF382188 AK314623 BC039317	-20595	+	AF498967 Y07923 AB464152 AB040147 AK292762 BC026356 NM_014470	-58917	-	AF026402 BC002366 TSC_hg19_v1_chr12_-_49245925 AK294877 AK312379 AK128428 AK292921 NM_004818	-72585	-	NM_001143781	146	-	DQ892057 DQ895251 AF238079 BC027973 AY358998 BC048292 AK301455 TSC_hg19_v1_chr12_-_49319304 NM_001143782 NM_016594	753	-	BC017565 TSC_hg19_v1_chr12_-_49351236 BC007647 BC007762	32665	-	NM_033124|CCDC65|85478|coiled-coil domain containing 65##AK302082|CCDC65|85478|coiled-coil domain containing 65##AK093051|CCDC65|85478|coiled-coil domain containing 65##AF382188|CCDC65|85478|coiled-coil domain containing 65##AK314623|CCDC65|85478|coiled-coil domain containing 65##BC039317|CCDC65|85478|coiled-coil domain containing 65##AF498967|RND1|27289|Rho family GTPase 1##Y07923|RND1|27289|Rho family GTPase 1##AB040147|RND1|27289|Rho family GTPase 1##AK292762|RND1|27289|Rho family GTPase 1##BC026356|RND1|27289|Rho family GTPase 1##NM_014470|RND1|27289|Rho family GTPase 1##AF026402|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##BC002366|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK294877|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK312379|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK128428|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK292921|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##NM_004818|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##NM_001143781|FKBP11|51303|FK506 binding protein 11, 19 kDa##DQ892057|FKBP11|51303|FK506 binding protein 11, 19 kDa##DQ895251|FKBP11|51303|FK506 binding protein 11, 19 kDa##AF238079|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC027973|FKBP11|51303|FK506 binding protein 11, 19 kDa##AY358998|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC048292|FKBP11|51303|FK506 binding protein 11, 19 kDa##AK301455|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_001143782|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_016594|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC017565|ARF3|377|ADP-ribosylation factor 3##BC007647|ARF3|377|ADP-ribosylation factor 3##BC007762|ARF3|377|ADP-ribosylation factor 3	0.0	
chr15	78251840	78251984	reg1011009.p1	10.980	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-327132	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-327213	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-538650	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	118041	-	NM_001101404	133014	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	171850	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.997139	CTCF.p2:-8:0.997
chr2	216814821	216814956	reg1010059.p1	10.980	+	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-514106	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-514368	-	AF312399 TSC_hg19_v1_chr2_-_216290008	-524916	-	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	63448	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	131656	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	131804	+	BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##AF312399|FN1|2335|fibronectin 1##AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169	0.01213	
chr22	39531254	39531378	reg1008812.p2	10.980	+	TSC_hg19_v1_chr22_-_39529023 BC128418	-2269	-	NM_001166002 NM_001166003 NM_001166004 NM_181773 BC069023 CR456481	-38046	+	AK092614 NM_021822 AK315650 BC061914 AF182420 CR456472 BC009683 BC024268 AB266487 AB462950 CU013022 CU013310 CU692904 JF262036	-58129	+	DQ064603 AB528611 EU446785 CU690844 BC051773 TSC_hg19_v1_chr22_-_39548584 NM_175709 AK124408	17251	-	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	105593	-	CR541807 CU013138 CU013426 AB590092 TSC_hg19_v1_chr22_-_39639984 CR456538 X02744	108709	-	BC128418|CBX7|23492|chromobox homolog 7##NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##AK092614|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_021822|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK315650|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC061914|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AF182420|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CR456472|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC009683|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC024268|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AB266487|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013022|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013310|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##JF262036|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##DQ064603|CBX7|23492|chromobox homolog 7##EU446785|CBX7|23492|chromobox homolog 7##BC051773|CBX7|23492|chromobox homolog 7##NM_175709|CBX7|23492|chromobox homolog 7##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR541807|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013138|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013426|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR456538|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02744|PDGFB|5155|platelet-derived growth factor beta polypeptide	0.02412	
chr2	99185810	99185930	reg1006376.p2	10.979	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-124512	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-222965	+	DQ426863 NM_001079878 NM_001298 DQ067460	-223237	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	39072	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	39180	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	39200	+	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)	1.012391	CTCF.p2:-15:1.000
chr7	50132214	50132338	reg1009176.p1	10.979	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-319006	+	AK126220 AY204751 BX647273 NM_152701	-1921221	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-2003321	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	548	-	NM_001161834	3405	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	212077	+	AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)	0.664924	CTCF.p2:-12:0.665
chr1	200939259	200939400	reg1011486.p1	10.978	+	AK316510 NM_001142569 TSC_hg19_v1_chr1_+_200864027 AK303885	-75332	+	TSC_hg19_v1_chr1_+_200860668 NM_018265 AK001583 AK001763 BC106877	-78683	+	BC126386 BC126388 AK315339 NM_005298	-97206	+	AM177180 AB527174 BC137281 BC144557 TSC_hg19_v1_chr1_-_200992598	53225	-	TSC_hg19_v1_chr1_-_200992826 AB007918 NM_001252100 NM_001252102 NM_001252103 NM_017596	53502	-	TSC_hg19_v1_chr1_+_200993085 AK022893 BC037533 BC016656	53758	+	AK316510|C1orf106|55765|chromosome 1 open reading frame 106##NM_001142569|C1orf106|55765|chromosome 1 open reading frame 106##AK303885|C1orf106|55765|chromosome 1 open reading frame 106##NM_018265|C1orf106|55765|chromosome 1 open reading frame 106##AK001583|C1orf106|55765|chromosome 1 open reading frame 106##AK001763|C1orf106|55765|chromosome 1 open reading frame 106##BC106877|C1orf106|55765|chromosome 1 open reading frame 106##BC126386|GPR25|2848|G protein-coupled receptor 25##BC126388|GPR25|2848|G protein-coupled receptor 25##AK315339|GPR25|2848|G protein-coupled receptor 25##NM_005298|GPR25|2848|G protein-coupled receptor 25##AM177180|KIF21B|23046|kinesin family member 21B##BC137281|KIF21B|23046|kinesin family member 21B##BC144557|KIF21B|23046|kinesin family member 21B##AB007918|KIF21B|23046|kinesin family member 21B##NM_001252100|KIF21B|23046|kinesin family member 21B##NM_001252102|KIF21B|23046|kinesin family member 21B##NM_001252103|KIF21B|23046|kinesin family member 21B##NM_017596|KIF21B|23046|kinesin family member 21B	0.905544	CTCF.p2:-2:0.906
chr12	25283733	25283890	reg1010767.p1	10.978	+	TSC_hg19_v1_chr12_+_25205520 BC029391 AK303103 AK303256 BC126417 BC144164 BC144165 BC144170	-78231	+	NM_001204126 NM_001204127 NM_006152	-78631	+	BC035880 NM_001101339 BC046192 BC062789	-133399	-	BC028415 AK297998 AK302235 AK301763 AK093102 AX747924 BC031047 BC047415 BC057795 NM_001082972 NM_001082973 NM_001204101 NM_001204102 NM_018272 AK304602	64252	-	TSC_hg19_v1_chr12_+_25348156 AK057730 NM_001001660	64340	+	AK094491 TSC_hg19_v1_chr12_+_25348215 BC100276 BC071769	64395	+	BC029391|LRMP|4033|lymphoid-restricted membrane protein##AK303103|LRMP|4033|lymphoid-restricted membrane protein##AK303256|LRMP|4033|lymphoid-restricted membrane protein##BC126417|LRMP|4033|lymphoid-restricted membrane protein##BC144164|LRMP|4033|lymphoid-restricted membrane protein##BC144165|LRMP|4033|lymphoid-restricted membrane protein##BC144170|LRMP|4033|lymphoid-restricted membrane protein##NM_001204126|LRMP|4033|lymphoid-restricted membrane protein##NM_001204127|LRMP|4033|lymphoid-restricted membrane protein##NM_006152|LRMP|4033|lymphoid-restricted membrane protein##BC035880|C12orf77|196415|chromosome 12 open reading frame 77##NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77##BC046192|C12orf77|196415|chromosome 12 open reading frame 77##BC062789|C12orf77|196415|chromosome 12 open reading frame 77##BC028415|CASC1|55259|cancer susceptibility candidate 1##AK297998|CASC1|55259|cancer susceptibility candidate 1##AK302235|CASC1|55259|cancer susceptibility candidate 1##AK301763|CASC1|55259|cancer susceptibility candidate 1##AK093102|CASC1|55259|cancer susceptibility candidate 1##BC031047|CASC1|55259|cancer susceptibility candidate 1##BC047415|CASC1|55259|cancer susceptibility candidate 1##BC057795|CASC1|55259|cancer susceptibility candidate 1##NM_001082972|CASC1|55259|cancer susceptibility candidate 1##NM_001082973|CASC1|55259|cancer susceptibility candidate 1##NM_001204101|CASC1|55259|cancer susceptibility candidate 1##NM_001204102|CASC1|55259|cancer susceptibility candidate 1##NM_018272|CASC1|55259|cancer susceptibility candidate 1##AK304602|CASC1|55259|cancer susceptibility candidate 1##AK057730|LYRM5|144363|LYR motif containing 5##NM_001001660|LYRM5|144363|LYR motif containing 5##BC100276|LYRM5|144363|LYR motif containing 5##BC071769|LYRM5|144363|LYR motif containing 5	0.883903	CTCF.p2:8:0.884
chr17	74178356	74178495	reg1008304.p1	10.977	+	BC046460 NM_001454	-41051	-	TSC_hg19_v1_chr17_-_74099869 BX647763 NM_001013839 NM_001145297 NM_001145298 NM_001145299 NM_015219	-78560	-	AK295871 TSC_hg19_v1_chr17_-_74099825 FJ457119 FJ457120 AK023832 BC018466 AB028990 BC011045 AK128278 BC029432 AK022397 AL834324	-78701	-	AK091467 AX747002 AB067504 NM_052916 TSC_hg19_v1_chr17_-_74236615	58023	-	TSC_hg19_v1_chr17_+_74261282 BC060859 NM_182565	82859	+	TSC_hg19_v1_chr17_+_74261431 BC035511 EU176314	83082	+	BC046460|FOXJ1|2302|forkhead box J1##NM_001454|FOXJ1|2302|forkhead box J1##BX647763|EXOC7|23265|exocyst complex component 7##NM_001013839|EXOC7|23265|exocyst complex component 7##NM_001145297|EXOC7|23265|exocyst complex component 7##NM_001145298|EXOC7|23265|exocyst complex component 7##NM_001145299|EXOC7|23265|exocyst complex component 7##NM_015219|EXOC7|23265|exocyst complex component 7##AK295871|EXOC7|23265|exocyst complex component 7##FJ457119|EXOC7|23265|exocyst complex component 7##FJ457120|EXOC7|23265|exocyst complex component 7##AK023832|EXOC7|23265|exocyst complex component 7##BC018466|EXOC7|23265|exocyst complex component 7##AB028990|EXOC7|23265|exocyst complex component 7##BC011045|EXOC7|23265|exocyst complex component 7##AK128278|EXOC7|23265|exocyst complex component 7##BC029432|EXOC7|23265|exocyst complex component 7##AK022397|EXOC7|23265|exocyst complex component 7##AL834324|EXOC7|23265|exocyst complex component 7##AK091467|RNF157|114804|ring finger protein 157##AB067504|RNF157|114804|ring finger protein 157##NM_052916|RNF157|114804|ring finger protein 157##BC060859|FAM100B|283991|family with sequence similarity 100, member B##NM_182565|FAM100B|283991|family with sequence similarity 100, member B##BC035511|FAM100B|283991|family with sequence similarity 100, member B##EU176314|FAM100B|283991|family with sequence similarity 100, member B	0.944847	CTCF.p2:12:0.945
chr19	1372125	1372218	reg1008700.p2	10.977	+	TSC_hg19_v1_chr19_+_1354979 NM_032853 AK310721 U20897	-17170	+	TSC_hg19_v1_chr19_+_1286081 AJ007292 NM_001405 AB463609	-86206	+	TSC_hg19_v1_chr19_+_1275540 NM_017914 BC000890 BC012080	-96604	+	TSC_hg19_v1_chr19_+_1383882 AK092169 AX747389 NM_024407 AK128713	11715	+	AK293917 AK297611 TSC_hg19_v1_chr19_+_1383902 AF115969 AK091623 AK127759 AX747100	11729	+	TSC_hg19_v1_chr19_+_1383905 AK222738 BC005954 AF060512	11739	+	NM_032853|MUM1|84939|melanoma associated antigen (mutated) 1##AK310721|MUM1|84939|melanoma associated antigen (mutated) 1##U20897|MUM1|84939|melanoma associated antigen (mutated) 1##AJ007292|EFNA2|1943|ephrin-A2##NM_001405|EFNA2|1943|ephrin-A2##NM_017914|C19orf24|55009|chromosome 19 open reading frame 24##BC000890|C19orf24|55009|chromosome 19 open reading frame 24##BC012080|C19orf24|55009|chromosome 19 open reading frame 24##AK092169|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##NM_024407|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK128713|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK293917|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AF115969|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK091623|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK127759|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK222738|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##BC005954|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AF060512|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)	0.913037	CTCF.p2:-2:0.913
chr4	153656583	153656715	reg1008573.p1	10.977	+	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	-55449	-	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	-199216	+	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	-200355	-	BC037869 NM_145720	44254	-	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	44372	+	TSC_hg19_v1_chr4_+_153701117 AK290472 U52521 BC103759 BC105114 BC105116 BC143675 BC143676 AK096509	44478	+	BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154##AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##BC037869|TIGD4|201798|tigger transposable element derived 4##NM_145720|TIGD4|201798|tigger transposable element derived 4##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK290472|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##U52521|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC103759|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105114|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105116|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143675|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143676|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK096509|ARFIP1|27236|ADP-ribosylation factor interacting protein 1	0.541519	CTCF.p2:23:0.542
chr10	26973739	26973865	reg1010216.p1	10.976	+	TSC_hg19_v1_chr10_+_26727703 AY152730	-246096	+	TSC_hg19_v1_chr10_+_26727679 BC054516	-246134	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	-246485	+	AK096048 TSC_hg19_v1_chr10_-_26986612	12782	-	TSC_hg19_v1_chr10_+_26986597 AK024802 AK223414 AB210838 NM_014317 BC063635 BC049211 AF118395	12844	+	TSC_hg19_v1_chr10_-_27057776 AK315914	84015	-	AY152730|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK024802|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK223414|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AB210838|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##NM_014317|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC063635|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC049211|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AF118395|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK315914|ABI1|10006|abl-interactor 1	0.987869	CTCF.p2:-22:0.988
chr3	100035526	100035649	reg1012195.p1	10.976	+	NM_001199198 NM_018309 TSC_hg19_v1_chr3_+_99979835 AK001908 AB449910 BC020955 BX648032	-55810	+	TSC_hg19_v1_chr3_+_99898312 AK055026	-137226	+	AK300704 NM_001167924	-201814	+	TSC_hg19_v1_chr3_+_100053600 NM_020202 AF260334 BC107890 AK225979 AK294010 AK295835 BC020620 AF284574 AK313704	18020	+	TSC_hg19_v1_chr3_-_100119707 DQ896424 CU688068	84164	-	AB018262 BC003633 TSC_hg19_v1_chr3_-_100119948	84341	-	NM_001199198|TBC1D23|55773|TBC1 domain family, member 23##NM_018309|TBC1D23|55773|TBC1 domain family, member 23##AK001908|TBC1D23|55773|TBC1 domain family, member 23##AB449910|TBC1D23|55773|TBC1 domain family, member 23##BC020955|TBC1D23|55773|TBC1 domain family, member 23##BX648032|TBC1D23|55773|TBC1 domain family, member 23##AK300704|C3orf26|84319|chromosome 3 open reading frame 26##NM_001167924|C3orf26|84319|chromosome 3 open reading frame 26##NM_020202|NIT2|56954|nitrilase family, member 2##AF260334|NIT2|56954|nitrilase family, member 2##BC107890|NIT2|56954|nitrilase family, member 2##AK225979|NIT2|56954|nitrilase family, member 2##AK294010|NIT2|56954|nitrilase family, member 2##BC020620|NIT2|56954|nitrilase family, member 2##AF284574|NIT2|56954|nitrilase family, member 2##AK313704|NIT2|56954|nitrilase family, member 2##DQ896424|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##AB018262|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##BC003633|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)	0.91086	CTCF.p2:3:0.911
chr3	8366588	8366698	reg1009217.p1	10.976	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	-1463745	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	-1463844	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-3137152	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	176687	-	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	176872	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	176938	+	X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1	0.021325	
chr7	30604020	30604131	reg1008753.p1	10.976	+	CU674304 TSC_hg19_v1_chr7_-_30544445 BC013937 BC005356 AK315608 BC019243 BC000625 NM_001199815 NM_001199816 NM_001199817 NM_024051	-59674	-	AY128682 AY128683 AY128684 AY128685 AY128686 AF113925 BC040339 AK300367 AK023969 NM_006092	-85754	-	TSC_hg19_v1_chr7_+_30324634 AY054122	-279419	+	NM_002047	30105	+	TSC_hg19_v1_chr7_-_30634379 AK096687	30297	-	TSC_hg19_v1_chr7_+_30634447 AK074524 AK295490 BC007722 AK310351 BC000065 D30658 BC007755 AB528358 DQ892773 DQ896021 U09587	30431	+	BC013937|GGCT|79017|gamma-glutamylcyclotransferase##BC005356|GGCT|79017|gamma-glutamylcyclotransferase##AK315608|GGCT|79017|gamma-glutamylcyclotransferase##BC019243|GGCT|79017|gamma-glutamylcyclotransferase##BC000625|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199815|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199816|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199817|GGCT|79017|gamma-glutamylcyclotransferase##NM_024051|GGCT|79017|gamma-glutamylcyclotransferase##AY128682|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128683|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128684|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128685|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128686|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AF113925|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC040339|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK300367|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK023969|NOD1|10392|nucleotide-binding oligomerization domain containing 1##NM_006092|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY054122|ZNRF2|223082|zinc and ring finger 2##NM_002047|GARS|2617|glycyl-tRNA synthetase##AK096687|LOC401320|401320|uncharacterized LOC401320##AK074524|GARS|2617|glycyl-tRNA synthetase##AK295490|GARS|2617|glycyl-tRNA synthetase##BC007722|GARS|2617|glycyl-tRNA synthetase##AK310351|GARS|2617|glycyl-tRNA synthetase##BC000065|GARS|2617|glycyl-tRNA synthetase##D30658|GARS|2617|glycyl-tRNA synthetase##BC007755|GARS|2617|glycyl-tRNA synthetase##DQ892773|GARS|2617|glycyl-tRNA synthetase##DQ896021|GARS|2617|glycyl-tRNA synthetase##U09587|GARS|2617|glycyl-tRNA synthetase	0.999791	CTCF.p2:15:1.000
chr17	62028448	62028560	reg1008764.p2	10.975	+	S52229 S79249 X83539 M80461 BC032651 BC002975 BC030210 AX775815 AX775817 AK222954 AK313583 AK223210 NM_000626 NM_001039933 NM_021602 M89957	-18838	-	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	-32338	-	BC119747 BC029365 NM_001318 NM_022579 NM_022580 NM_022581 AX772828	-39847	-	AY212253 M81758 NM_000334	21734	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	47258	+	NM_000873 TSC_hg19_v1_chr17_-_62084314	55801	-	S52229|CD79B|974|CD79b molecule, immunoglobulin-associated beta##S79249|CD79B|974|CD79b molecule, immunoglobulin-associated beta##X83539|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M80461|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC032651|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC002975|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC030210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775815|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775817|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK222954|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK313583|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK223210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_000626|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_001039933|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_021602|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M89957|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1##BC119747|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BC029365|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_001318|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022579|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022580|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022581|CSHL1|1444|chorionic somatomammotropin hormone-like 1##AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##NM_000873|ICAM2|3384|intercellular adhesion molecule 2	0.987416	CTCF.p2:-5:0.987
chr6	106671310	106671442	reg1011465.p1	10.975	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	-124572	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	-137141	+	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	-137180	+	BC002699 TSC_hg19_v1_chr6_-_106773313	101932	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	102156	-	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	102287	-	AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	0.958401	CTCF.p2:18:0.958
chr6	25942903	25943024	reg1009100.p1	10.975	+	U90544 NM_005835	-12072	-	BC017952 AK298297 AK298367 AK298271 NM_001098486 NM_006632	-68509	-	AK290783 AK308035 NM_005074	-110686	-	TSC_hg19_v1_chr6_+_25963029 BX640949 AK313248 BC026930 NM_006355 AB209906	20070	+	CR936707 TSC_hg19_v1_chr6_+_25963398	20445	+	CU686848 AB590705 EU446958 BC069492 TSC_hg19_v1_chr6_-_26018016 BC101593 BC112140 NM_005325	75036	-	U90544|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2##NM_005835|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2##BC017952|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##AK298297|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##AK298367|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##AK298271|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##NM_001098486|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##NM_006632|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##AK290783|SLC17A1|6568|solute carrier family 17 (sodium phosphate), member 1##AK308035|SLC17A1|6568|solute carrier family 17 (sodium phosphate), member 1##NM_005074|SLC17A1|6568|solute carrier family 17 (sodium phosphate), member 1##BX640949|TRIM38|10475|tripartite motif containing 38##AK313248|TRIM38|10475|tripartite motif containing 38##BC026930|TRIM38|10475|tripartite motif containing 38##NM_006355|TRIM38|10475|tripartite motif containing 38##AB209906|TRIM38|10475|tripartite motif containing 38##CR936707|TRIM38|10475|tripartite motif containing 38##EU446958|HIST1H1A|3024|histone cluster 1, H1a##BC069492|HIST1H1A|3024|histone cluster 1, H1a##BC101593|HIST1H1A|3024|histone cluster 1, H1a##BC112140|HIST1H1A|3024|histone cluster 1, H1a##NM_005325|HIST1H1A|3024|histone cluster 1, H1a	0.692701	CTCF.p2:5:0.693
chr2	231794124	231794232	reg1009410.p2	10.974	+	BC032694 NM_005683	-4238	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-64456	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-64500	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	66714	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	108059	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	127399	+	BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.2036	CTCF.p2:-28:0.204
chr8	101138288	101138433	reg1012113.p1	10.974	+	BC092411 NM_015668 TSC_hg19_v1_chr8_-_101118447	-19936	-	AY009106 BC036665 AK292559 TSC_hg19_v1_chr8_-_101118229 BC047060	-20141	-	NM_004374	-232119	-	BC090892 NM_001029860	19702	-	BC018157 NM_005034 TSC_hg19_v1_chr8_+_101162863 BC000806 Z47727	24517	+	TSC_hg19_v1_chr8_+_101170231 AK057482 NM_172218 BC055091	31903	+	BC092411|RGS22|26166|regulator of G-protein signaling 22##NM_015668|RGS22|26166|regulator of G-protein signaling 22##AY009106|RGS22|26166|regulator of G-protein signaling 22##BC036665|RGS22|26166|regulator of G-protein signaling 22##AK292559|RGS22|26166|regulator of G-protein signaling 22##BC047060|RGS22|26166|regulator of G-protein signaling 22##NM_004374|COX6C|1345|cytochrome c oxidase subunit VIc##BC090892|FBXO43|286151|F-box protein 43##NM_001029860|FBXO43|286151|F-box protein 43##BC018157|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##NM_005034|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##BC000806|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##Z47727|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##AK057482|SPAG1|6674|sperm associated antigen 1##NM_172218|SPAG1|6674|sperm associated antigen 1##BC055091|SPAG1|6674|sperm associated antigen 1	0.874121	CTCF.p2:-4:0.874
chr9	137341543	137341655	reg1009644.p1	10.974	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-123199	+	TSC_hg19_v1_chr9_+_137218317 BC063827 NM_002957	-123284	+	AJ011376 NM_052821 AB464354	-336645	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	192048	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	192211	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	431061	+	BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##BC063827|RXRA|6256|retinoid X receptor, alpha##NM_002957|RXRA|6256|retinoid X receptor, alpha##AJ011376|WDR5|11091|WD repeat domain 5##NM_052821|WDR5|11091|WD repeat domain 5##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##D90279|COL5A1|1289|collagen, type V, alpha 1##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	1.479778	CTCF.p2:-12:0.978	CTCF.p2:38:0.439
chr11	44797072	44797206	reg1008397.p1	10.972	+	NM_130783	-11164	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-209912	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-209974	+	TSC_hg19_v1_chr11_-_44956087 AF010315	158968	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	175278	-	AF275818 NM_020229	318424	+	NM_130783|TSPAN18|90139|tetraspanin 18##AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11	0.971454	CTCF.p2:2:0.971
chr17	30986478	30986587	reg1008681.p1	10.972	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-171772	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-171935	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-172461	+	CU688936 AB385376 AB018270 BC146763 NM_015194	217363	-	TSC_hg19_v1_chr17_-_31204141 AK127942	217591	-	TSC_hg19_v1_chr17_-_31204196 BC030602	217681	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.122737	
chr8	96069271	96069374	reg1007920.p1	10.972	+	TSC_hg19_v1_chr8_+_96037224 NM_152416 BC028166 DQ891641 DQ894830 AK298631 AK301414	-32018	+	TSC_hg19_v1_chr8_-_95961604 AK315071 AF409114 AF409115 AK125880 NM_001135733 NM_033285	-107665	-	TSC_hg19_v1_chr8_-_95907430 BC007015 BC020729 NM_057749	-161870	-	TSC_hg19_v1_chr8_+_96145948 NM_024613	76623	+	TSC_hg19_v1_chr8_+_96146012 AL834473 BC011806	76686	+	TSC_hg19_v1_chr8_+_96146116 AK023249	76814	+	NM_152416|C8orf38|137682|chromosome 8 open reading frame 38##BC028166|C8orf38|137682|chromosome 8 open reading frame 38##DQ891641|C8orf38|137682|chromosome 8 open reading frame 38##DQ894830|C8orf38|137682|chromosome 8 open reading frame 38##AK298631|C8orf38|137682|chromosome 8 open reading frame 38##AK301414|C8orf38|137682|chromosome 8 open reading frame 38##AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##BC007015|CCNE2|9134|cyclin E2##BC020729|CCNE2|9134|cyclin E2##NM_057749|CCNE2|9134|cyclin E2##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##AL834473|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC011806|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2	0.726714	CTCF.p2:-9:0.727
chr1	156808787	156808961	reg1010189.p1	10.971	+	AB528908 EU832614 EU832686 AF097744 AK222737 AY763100 AF051325 AJ000553 AY763099 BC012107 AK313706 NM_001161441 NM_001161442 NM_001161444 NM_003975	-22305	-	AY763098 NM_001161443	-22936	-	AK126428 NM_001007792	-23369	+	AF064078 AK310760 NM_014215	19814	-	M23102 TSC_hg19_v1_chr1_+_156830655 BC136554 BC144239 NM_001012331 NM_002529 AK290759 AK312704 BC062580	21792	+	NM_001080471	54648	+	EU832614|SH2D2A|9047|SH2 domain containing 2A##EU832686|SH2D2A|9047|SH2 domain containing 2A##AF097744|SH2D2A|9047|SH2 domain containing 2A##AK222737|SH2D2A|9047|SH2 domain containing 2A##AY763100|SH2D2A|9047|SH2 domain containing 2A##AF051325|SH2D2A|9047|SH2 domain containing 2A##AJ000553|SH2D2A|9047|SH2 domain containing 2A##AY763099|SH2D2A|9047|SH2 domain containing 2A##BC012107|SH2D2A|9047|SH2 domain containing 2A##AK313706|SH2D2A|9047|SH2 domain containing 2A##NM_001161441|SH2D2A|9047|SH2 domain containing 2A##NM_001161442|SH2D2A|9047|SH2 domain containing 2A##NM_001161444|SH2D2A|9047|SH2 domain containing 2A##NM_003975|SH2D2A|9047|SH2 domain containing 2A##AY763098|SH2D2A|9047|SH2 domain containing 2A##NM_001161443|SH2D2A|9047|SH2 domain containing 2A##AK126428|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001007792|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AF064078|INSRR|3645|insulin receptor-related receptor##AK310760|INSRR|3645|insulin receptor-related receptor##NM_014215|INSRR|3645|insulin receptor-related receptor##M23102|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC136554|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC144239|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001012331|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_002529|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK290759|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK312704|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC062580|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001080471|PEAR1|375033|platelet endothelial aggregation receptor 1	0.159476	
chr2	200353641	200353788	reg1011784.p1	10.971	+	AK291463 NM_015265	-17726	-	TSC_hg19_v1_chr2_-_200329812 AB209376 NM_001172517	-23894	-	AB028957 TSC_hg19_v1_chr2_-_200325214	-28473	-	AB568489 TSC_hg19_v1_chr2_-_200715872	362149	-	BC039445 TSC_hg19_v1_chr2_-_200715916	362199	-	TSC_hg19_v1_chr2_+_200775981 NM_153689	422263	+	AK291463|SATB2|23314|SATB homeobox 2##NM_015265|SATB2|23314|SATB homeobox 2##AB209376|SATB2|23314|SATB homeobox 2##NM_001172517|SATB2|23314|SATB homeobox 2##AB028957|SATB2|23314|SATB homeobox 2##AB568489|FONG|348751|uncharacterized LOC348751##BC039445|FONG|348751|uncharacterized LOC348751##NM_153689|C2orf69|205327|chromosome 2 open reading frame 69	0.984018	CTCF.p2:0:0.984
chr11	131381834	131381927	reg1005219.p1	10.970	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-141411	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-595492	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-595535	-	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	398744	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	399459	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	1431134	-	NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.991245	CTCF.p2:4:0.991
chr6	47599186	47599298	reg1007899.p1	10.970	+	TSC_hg19_v1_chr6_+_47445937 AF146277 BC069444	-153326	+	TSC_hg19_v1_chr6_+_47445524 NM_012120	-153727	+	TSC_hg19_v1_chr6_-_47277647 NM_014452	-321547	-	AY140953 DQ315369 NM_153839	25031	+	AK095395 NM_153838 DQ315370	67052	+	BC126194 BC126198 NM_181744 AY377391 AY288419 HQ258199	150546	+	AF146277|CD2AP|23607|CD2-associated protein##BC069444|CD2AP|23607|CD2-associated protein##NM_012120|CD2AP|23607|CD2-associated protein##NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AY140953|GPR111|222611|G protein-coupled receptor 111##DQ315369|GPR111|222611|G protein-coupled receptor 111##NM_153839|GPR111|222611|G protein-coupled receptor 111##AK095395|GPR115|221393|G protein-coupled receptor 115##NM_153838|GPR115|221393|G protein-coupled receptor 115##DQ315370|GPR115|221393|G protein-coupled receptor 115##BC126194|OPN5|221391|opsin 5##BC126198|OPN5|221391|opsin 5##NM_181744|OPN5|221391|opsin 5##AY377391|OPN5|221391|opsin 5##AY288419|OPN5|221391|opsin 5##HQ258199|OPN5|221391|opsin 5	0.999668	CTCF.p2:-21:1.000
chr9	70151325	70151460	reg1011229.p1	10.970	+	AL136793 NM_001098805	-769412	+	AF265442 BC069006 AK293173 NM_001085457	-888838	-	NM_001085476	-949189	-	NM_001126334	27422	-	NM_001099279 NM_199244	278338	-	CU688346 TSC_hg19_v1_chr9_-_70490092	338689	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.829185	CTCF.p2:18:0.829
chr1	179048427	179048553	reg1009537.p2	10.969	+	AK289989 BC046441 TSC_hg19_v1_chr1_+_178995259	-53272	+	TSC_hg19_v1_chr1_+_178995055 AB480690 BC051794 NM_014864	-53426	+	TSC_hg19_v1_chr1_+_178995028 AB007944	-53470	+	NM_022371 TSC_hg19_v1_chr1_+_179051147	2644	+	BC088368 BC001085 TSC_hg19_v1_chr1_+_179051232 BC018292 AJ299403 AJ299441 BC007571 AK025998	2735	+	TSC_hg19_v1_chr1_+_179051236 BC011746 AK316530 AK299966 CU675711 CU676228 CR457354	2758	+	AK289989|FAM20B|9917|family with sequence similarity 20, member B##BC046441|FAM20B|9917|family with sequence similarity 20, member B##AB480690|FAM20B|9917|family with sequence similarity 20, member B##BC051794|FAM20B|9917|family with sequence similarity 20, member B##NM_014864|FAM20B|9917|family with sequence similarity 20, member B##AB007944|FAM20B|9917|family with sequence similarity 20, member B##NM_022371|TOR3A|64222|torsin family 3, member A##BC088368|TOR3A|64222|torsin family 3, member A##BC001085|TOR3A|64222|torsin family 3, member A##BC018292|TOR3A|64222|torsin family 3, member A##AJ299403|TOR3A|64222|torsin family 3, member A##AJ299441|TOR3A|64222|torsin family 3, member A##BC007571|TOR3A|64222|torsin family 3, member A##AK025998|TOR3A|64222|torsin family 3, member A##BC011746|TOR3A|64222|torsin family 3, member A##AK316530|TOR3A|64222|torsin family 3, member A##AK299966|TOR3A|64222|torsin family 3, member A##CR457354|TOR3A|64222|torsin family 3, member A	0.011634	
chr12	49736415	49736525	reg1007276.p1	10.969	+	BC110812 AF466366 NM_001008223	-5507	-	NM_001100620 NM_005480 TSC_hg19_v1_chr12_+_49717037 AK315211 AK296811 AK309716 AK310709 AK299302 BC032583 BC018627 BC011597	-19434	+	NM_006262 TSC_hg19_v1_chr12_+_49688929 BC032703 AB528454 CU689492 DQ893358 DQ896677	-47525	+	TSC_hg19_v1_chr12_+_49740718 AK055747	4233	+	BC033236 NM_024902	4570	+	TSC_hg19_v1_chr12_+_49760679 AK095582 NM_023071	24219	+	BC110812|C1QL4|338761|complement component 1, q subcomponent-like 4##AF466366|C1QL4|338761|complement component 1, q subcomponent-like 4##NM_001008223|C1QL4|338761|complement component 1, q subcomponent-like 4##NM_001100620|TROAP|10024|trophinin associated protein (tastin)##NM_005480|TROAP|10024|trophinin associated protein (tastin)##AK315211|TROAP|10024|trophinin associated protein (tastin)##AK296811|TROAP|10024|trophinin associated protein (tastin)##AK309716|TROAP|10024|trophinin associated protein (tastin)##AK310709|TROAP|10024|trophinin associated protein (tastin)##AK299302|TROAP|10024|trophinin associated protein (tastin)##BC032583|TROAP|10024|trophinin associated protein (tastin)##BC018627|TROAP|10024|trophinin associated protein (tastin)##BC011597|TROAP|10024|trophinin associated protein (tastin)##NM_006262|PRPH|5630|peripherin##BC032703|PRPH|5630|peripherin##DQ893358|PRPH|5630|peripherin##DQ896677|PRPH|5630|peripherin##AK055747|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##AK095582|SPATS2|65244|spermatogenesis associated, serine-rich 2##NM_023071|SPATS2|65244|spermatogenesis associated, serine-rich 2	1.064592	CTCF.p2:-86:0.998
chr15	92926894	92927007	reg1009374.p2	10.969	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-529383	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	-529853	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	-530007	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	10249	+	AK057393 NM_153040	87956	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	271929	-	AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B	0.885914	CTCF.p2:2:0.886
chr7	39936064	39936189	reg1009936.p1	10.968	+	TSC_hg19_v1_chr7_+_39773192 BC038571	-162894	+	TSC_hg19_v1_chr7_+_39663298 AK308109	-272818	+	TSC_hg19_v1_chr7_+_39663204 BC039858	-272915	+	TSC_hg19_v1_chr7_+_39989642 BC080601	53500	+	BC064414 TSC_hg19_v1_chr7_+_39989879	53758	+	TSC_hg19_v1_chr7_+_39989958 AK092534 NM_003718 NM_031267	53833	+	BC038571|LINC00265|349114|long intergenic non-protein coding RNA 265##AK308109|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##BC080601|CDK13|8621|cyclin-dependent kinase 13##AK092534|CDK13|8621|cyclin-dependent kinase 13##NM_003718|CDK13|8621|cyclin-dependent kinase 13##NM_031267|CDK13|8621|cyclin-dependent kinase 13	0.981742	CTCF.p2:-1:0.982
chr14	94647145	94647285	reg1009610.p1	10.967	+	NM_020958 NM_058237 BC002650 BC068491 AB046842 AB385489 CU686649	-6491	+	TSC_hg19_v1_chr14_-_94595942 NM_032036	-51275	-	BC032626 TSC_hg19_v1_chr14_-_94595922 AF208232	-51297	-	AF181467 NM_016186	112145	-	TSC_hg19_v1_chr14_-_94759564 AY358597 AK314877	112347	-	BX248011 NM_001100607 TSC_hg19_v1_chr14_-_94759609 BC022261	112389	-	NM_020958|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##NM_058237|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##BC002650|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##BC068491|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##AB046842|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##NM_032036|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2##BC032626|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2##AF208232|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2##AF181467|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##NM_016186|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##AY358597|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##AK314877|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##BX248011|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##NM_001100607|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##BC022261|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10	0.124492	
chr2	73857923	73858053	reg1011507.p1	10.967	+	TSC_hg19_v1_chr2_+_73613119 AJ417593 AX751581 NM_015120	-244930	+	AB463596 BC136252 BC143379 X60104 BC034462 TSC_hg19_v1_chr2_-_73520677 NM_001965 AK314154	-337348	-	AB075820 TSC_hg19_v1_chr2_-_73496671 NM_001080410	-361312	-	AB019551 BC012626 AF187813 NM_003960	11526	-	AF185571 BC069564 BC121101 BC121102 NM_016347	70478	-	TSC_hg19_v1_chr2_-_73964473 AK291071 AF060921 AK097254 AY643713 BC029492 AK295239 AF151879 NM_016058	106483	-	AJ417593|ALMS1|7840|Alstrom syndrome 1##AX751581|ALMS1|7840|Alstrom syndrome 1##NM_015120|ALMS1|7840|Alstrom syndrome 1##BC136252|EGR4|1961|early growth response 4##BC143379|EGR4|1961|early growth response 4##X60104|EGR4|1961|early growth response 4##BC034462|EGR4|1961|early growth response 4##NM_001965|EGR4|1961|early growth response 4##AK314154|EGR4|1961|early growth response 4##AB075820|FBXO41|150726|F-box protein 41##NM_001080410|FBXO41|150726|F-box protein 41##AB019551|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##BC012626|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##AF187813|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##NM_003960|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##AF185571|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC069564|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC121101|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC121102|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##NM_016347|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##AK291071|TPRKB|51002|TP53RK binding protein##AF060921|TPRKB|51002|TP53RK binding protein##AK097254|TPRKB|51002|TP53RK binding protein##AY643713|TPRKB|51002|TP53RK binding protein##BC029492|TPRKB|51002|TP53RK binding protein##AK295239|TPRKB|51002|TP53RK binding protein##AF151879|TPRKB|51002|TP53RK binding protein##NM_016058|TPRKB|51002|TP53RK binding protein	0.9541	CTCF.p2:9:0.954
chr4	160367744	160367875	reg1011047.p1	10.967	+	AK294459 NM_014247	-178812	+	AK058100 NM_152543	-411477	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-677524	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	2717342	-	TSC_hg19_v1_chr4_-_164088002 AK097352	3720183	-	TSC_hg19_v1_chr4_-_164088043 AK308601	3720228	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.931665	CTCF.p2:19:0.932
chr6	45682570	45682707	reg1009918.p1	10.967	+	TSC_hg19_v1_chr6_+_45390379 L40992	-292226	+	TSC_hg19_v1_chr6_+_45390325 BC108919 BC108920	-292333	+	TSC_hg19_v1_chr6_+_45389825 NM_004348	-292773	+	DQ892643 DQ895881 CU690236 AF176920 AK314416 AK075163 TSC_hg19_v1_chr6_-_45983598 AK075144 AF216941 AK222544 BC035968 DQ679794 AK223130 NM_016929	300839	-	AY032602 AK097048 NM_001114086	365393	-	NM_014936 TSC_hg19_v1_chr6_+_46097726 BC018054	415076	+	L40992|RUNX2|860|runt-related transcription factor 2##BC108919|RUNX2|860|runt-related transcription factor 2##BC108920|RUNX2|860|runt-related transcription factor 2##NM_004348|RUNX2|860|runt-related transcription factor 2##DQ892643|CLIC5|53405|chloride intracellular channel 5##DQ895881|CLIC5|53405|chloride intracellular channel 5##AF176920|CLIC5|53405|chloride intracellular channel 5##AK314416|CLIC5|53405|chloride intracellular channel 5##AK075163|CLIC5|53405|chloride intracellular channel 5##AK075144|CLIC5|53405|chloride intracellular channel 5##AF216941|CLIC5|53405|chloride intracellular channel 5##AK222544|CLIC5|53405|chloride intracellular channel 5##BC035968|CLIC5|53405|chloride intracellular channel 5##DQ679794|CLIC5|53405|chloride intracellular channel 5##AK223130|CLIC5|53405|chloride intracellular channel 5##NM_016929|CLIC5|53405|chloride intracellular channel 5##AY032602|CLIC5|53405|chloride intracellular channel 5##AK097048|CLIC5|53405|chloride intracellular channel 5##NM_001114086|CLIC5|53405|chloride intracellular channel 5##NM_014936|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##BC018054|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)	0.069237	
chr12	121124655	121124796	reg1008392.p2	10.966	+	AF169148 AF169149 NM_004276 NM_031205	-36355	+	BC030201 NM_001033677	-46304	+	AK223206 TSC_hg19_v1_chr12_-_121019185 AK303144 AF070660 AF117232 AJ306296 BC012505 NM_015918 NM_198202	-105537	-	TSC_hg19_v1_chr12_+_121124951 NM_014730	213	+	TSC_hg19_v1_chr12_+_121124973 D63486 BC016297 BC000371	314	+	CR936818 TSC_hg19_v1_chr12_+_121132759	7993	+	AF169148|CABP1|9478|calcium binding protein 1##AF169149|CABP1|9478|calcium binding protein 1##NM_004276|CABP1|9478|calcium binding protein 1##NM_031205|CABP1|9478|calcium binding protein 1##BC030201|CABP1|9478|calcium binding protein 1##NM_001033677|CABP1|9478|calcium binding protein 1##AK223206|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK303144|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF070660|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF117232|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AJ306296|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##BC012505|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015918|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_198202|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_014730|MLEC|9761|malectin##D63486|MLEC|9761|malectin##BC016297|MLEC|9761|malectin##BC000371|MLEC|9761|malectin	0.172404	
chr12	34175048	34175184	reg1010875.p1	10.965	+	BC101024 BC101025 TSC_hg19_v1_chr12_-_33592705 AY198413 NM_198992	-582450	-	EU520483 EU520484 EU520485 EU520486 AB590796 HQ258660 TSC_hg19_v1_chr12_-_33049733 X97675 BC094762 BC126199 BC143966 BC143967 BC070083 NM_001005242 NM_004572	-1125381	-	AF132939 CU677373 DQ893063 DQ896315 BC015625 TSC_hg19_v1_chr12_-_32908835 AK024057 AK026619 AK130935 NM_001040436	-1266275	-	AJ312278 NM_032834	99	+	TSC_hg19_v1_chr12_+_34175402 BC022336	270	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	357	+	BC101024|SYT10|341359|synaptotagmin X##BC101025|SYT10|341359|synaptotagmin X##AY198413|SYT10|341359|synaptotagmin X##NM_198992|SYT10|341359|synaptotagmin X##EU520483|PKP2|5318|plakophilin 2##EU520484|PKP2|5318|plakophilin 2##EU520485|PKP2|5318|plakophilin 2##EU520486|PKP2|5318|plakophilin 2##HQ258660|PKP2|5318|plakophilin 2##X97675|PKP2|5318|plakophilin 2##BC094762|PKP2|5318|plakophilin 2##BC126199|PKP2|5318|plakophilin 2##BC143966|PKP2|5318|plakophilin 2##BC143967|PKP2|5318|plakophilin 2##BC070083|PKP2|5318|plakophilin 2##NM_001005242|PKP2|5318|plakophilin 2##NM_004572|PKP2|5318|plakophilin 2##AF132939|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##DQ893063|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##DQ896315|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##BC015625|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK024057|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK026619|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK130935|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##NM_001040436|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AJ312278|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_032834|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC022336|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)	0.981376	CTCF.p2:17:0.981
chr2	27977141	27977264	reg1010685.p1	10.965	+	TSC_hg19_v1_chr2_+_27886755 AK300958	-90432	+	BC074000 AB018307 NM_014860 AF197954 AK000329 AK304889 BC045638 AF224759 TSC_hg19_v1_chr2_-_27886542	-90710	-	AK001486 NM_018158 BC098302 BC098358 BC099711 BC099739 AY028435	-90853	+	TSC_hg19_v1_chr2_+_27994585 BC090047 NM_004891 NM_145330	17381	+	TSC_hg19_v1_chr2_+_27994614 BC020834 AF047440 BC087846 BC009475 CR456888 CR542117	17460	+	CU675980 AK300989 TSC_hg19_v1_chr2_-_28113253 AJ404857 NM_022128 BX648909 AY643715 BC017425	136048	-	AK300958|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC074000|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AB018307|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##NM_014860|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AF197954|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AK000329|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AK304889|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##BC045638|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AF224759|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AK001486|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##NM_018158|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC098302|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC098358|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC099711|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC099739|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##AY028435|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC090047|MRPL33|9553|mitochondrial ribosomal protein L33##NM_004891|MRPL33|9553|mitochondrial ribosomal protein L33##NM_145330|MRPL33|9553|mitochondrial ribosomal protein L33##BC020834|MRPL33|9553|mitochondrial ribosomal protein L33##AF047440|MRPL33|9553|mitochondrial ribosomal protein L33##BC087846|MRPL33|9553|mitochondrial ribosomal protein L33##BC009475|MRPL33|9553|mitochondrial ribosomal protein L33##CR456888|MRPL33|9553|mitochondrial ribosomal protein L33##CR542117|MRPL33|9553|mitochondrial ribosomal protein L33##AK300989|RBKS|64080|ribokinase##AJ404857|RBKS|64080|ribokinase##NM_022128|RBKS|64080|ribokinase##BX648909|RBKS|64080|ribokinase##AY643715|RBKS|64080|ribokinase##BC017425|RBKS|64080|ribokinase	0.0	
chr8	26185018	26185160	reg1010782.p1	10.965	+	AK303981 NM_001177591	-34358	+	TSC_hg19_v1_chr8_+_26149092 M64929 AY189686	-35895	+	AK314823 TSC_hg19_v1_chr8_+_26149043 BC041071	-36040	+	NM_004331 TSC_hg19_v1_chr8_+_26240583 AF452712 AK300286 AL132665 BC009603 AF067396 AF079221 AF060922 AK307195 AK300727 AF536326 AB004788 AK290213 BC001559 AB527613 BT019500 BT019501 CR456701 EU831983 EU832076	55495	+	BC047515 TSC_hg19_v1_chr8_-_26371389 BC036489 AK055325 NM_007257	186345	-	TSC_hg19_v1_chr8_+_26371546 AK092377 NM_001197293 AB370195	186539	+	AK303981|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##NM_001177591|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##M64929|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AY189686|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AK314823|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##BC041071|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC047515|PNMA2|10687|paraneoplastic antigen MA2##BC036489|PNMA2|10687|paraneoplastic antigen MA2##AK055325|PNMA2|10687|paraneoplastic antigen MA2##NM_007257|PNMA2|10687|paraneoplastic antigen MA2##AK092377|DPYSL2|1808|dihydropyrimidinase-like 2##NM_001197293|DPYSL2|1808|dihydropyrimidinase-like 2##AB370195|DPYSL2|1808|dihydropyrimidinase-like 2	0.962438	CTCF.p2:25:0.948
chr9	74886922	74887034	reg1009617.p1	10.965	+	TSC_hg19_v1_chr9_+_74764417 CU690994 AK315988	-122526	+	TSC_hg19_v1_chr9_+_74764402 AB033084	-122579	+	AF095286 TSC_hg19_v1_chr9_+_74764386 AF019638	-122592	+	TSC_hg19_v1_chr9_+_74920350 AK095210	33373	+	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	92747	-	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	93122	-	AK315988|GDA|9615|guanine deaminase##AB033084|GDA|9615|guanine deaminase##AF095286|GDA|9615|guanine deaminase##AF019638|GDA|9615|guanine deaminase##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5	0.80319	CTCF.p2:9:0.803
chr1	2105850	2105981	reg1012543.p1	10.964	+	NM_001033582	-69761	+	NM_001242874 AK294782	-100448	+	AK294649 NM_001033581	-100831	+	TSC_hg19_v1_chr1_-_2126212 BC041041 AF469129 BC066360 AK055593 BC103992 NM_182533	20264	-	AK127994 NM_001146310	33256	-	NM_003036 X15218 TSC_hg19_v1_chr1_+_2160159	54254	+	NM_001033582|PRKCZ|5590|protein kinase C, zeta##NM_001242874|PRKCZ|5590|protein kinase C, zeta##AK294782|PRKCZ|5590|protein kinase C, zeta##AK294649|PRKCZ|5590|protein kinase C, zeta##NM_001033581|PRKCZ|5590|protein kinase C, zeta##BC041041|C1orf86|199990|chromosome 1 open reading frame 86##AF469129|C1orf86|199990|chromosome 1 open reading frame 86##BC066360|C1orf86|199990|chromosome 1 open reading frame 86##AK055593|C1orf86|199990|chromosome 1 open reading frame 86##BC103992|C1orf86|199990|chromosome 1 open reading frame 86##NM_182533|C1orf86|199990|chromosome 1 open reading frame 86##AK127994|C1orf86|199990|chromosome 1 open reading frame 86##NM_001146310|C1orf86|199990|chromosome 1 open reading frame 86##NM_003036|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##X15218|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)	1.041636	CTCF.p2:-10:1.000
chr7	22491960	22492096	reg1010519.p1	10.964	+	AL833195 NM_012294	-95507	-	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-506546	-	AJ320497 NM_003777	-909196	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	47819	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	274795	+	TSC_hg19_v1_chr7_+_22767104 X04403	275090	+	AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)	0.97058	CTCF.p2:-2:0.971
chr15	38732612	38732721	reg1007881.p1	10.963	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	-187644	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	-188271	+	BC029221 NM_152453	-505210	+	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	13679	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	124265	-	AK093014 AX747856 BC119016 BC119810 NM_207444	256132	+	NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53	0.997844	CTCF.p2:-19:0.956
chr7	111375851	111375970	reg1008682.p1	10.963	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	-173426	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-644787	+	NM_001024607	-2851274	-	TSC_hg19_v1_chr7_-_111428948 AK294820	53101	-	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	470355	-	TSC_hg19_v1_chr7_-_111846458 AK095906 AK309605 NM_014705	470552	-	AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AK294820|DOCK4|9732|dedicator of cytokinesis 4##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4##AK095906|DOCK4|9732|dedicator of cytokinesis 4##AK309605|DOCK4|9732|dedicator of cytokinesis 4##NM_014705|DOCK4|9732|dedicator of cytokinesis 4	0.999521	CTCF.p2:17:1.000
chr9	6055348	6055497	reg1011069.p3	10.963	+	AF039023 AK300408 BC098406 TSC_hg19_v1_chr9_-_6015616 AK307840 BX537405 NM_001243202 NM_001243203 NM_012416	-39791	-	TSC_hg19_v1_chr9_-_6007953 NM_001017969	-47458	-	BC108654 TSC_hg19_v1_chr9_-_5968443	-87014	-	NM_001199640 NM_001199641 NM_033439 AK295908 AK313414 TSC_hg19_v1_chr9_+_6215806 AK303943 BC047085	160374	+	NM_001001874 NM_001001875 NM_033516 AK057479 AY032877 BC017589 BC042113 BC033792	272953	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	357722	+	AF039023|RANBP6|26953|RAN binding protein 6##AK300408|RANBP6|26953|RAN binding protein 6##BC098406|RANBP6|26953|RAN binding protein 6##BX537405|RANBP6|26953|RAN binding protein 6##NM_001243202|RANBP6|26953|RAN binding protein 6##NM_001243203|RANBP6|26953|RAN binding protein 6##NM_012416|RANBP6|26953|RAN binding protein 6##NM_001017969|KIAA2026|158358|KIAA2026##NM_001199640|IL33|90865|interleukin 33##NM_001199641|IL33|90865|interleukin 33##NM_033439|IL33|90865|interleukin 33##AK295908|IL33|90865|interleukin 33##AK313414|IL33|90865|interleukin 33##AK303943|IL33|90865|interleukin 33##BC047085|IL33|90865|interleukin 33##NM_001001874|TPD52L3|89882|tumor protein D52-like 3##NM_001001875|TPD52L3|89882|tumor protein D52-like 3##NM_033516|TPD52L3|89882|tumor protein D52-like 3##AK057479|TPD52L3|89882|tumor protein D52-like 3##AY032877|TPD52L3|89882|tumor protein D52-like 3##BC017589|TPD52L3|89882|tumor protein D52-like 3##BC042113|TPD52L3|89882|tumor protein D52-like 3##BC033792|TPD52L3|89882|tumor protein D52-like 3##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	0.771557	CTCF.p2:-22:0.772
chr7	129304366	129304500	reg1010358.p1	10.962	+	L22454 NM_001040110	-34516	+	AK293351 TSC_hg19_v1_chr7_+_129251621 BC016925 AK290891	-52821	+	TSC_hg19_v1_chr7_+_129251531 NM_005011	-52892	+	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	288318	-	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	288376	-	TSC_hg19_v1_chr7_-_129691215 BC000190 AB463378 AJ537494 AM393415 CU679956 BC011551 AF151050 AK001317 AK022373 NM_016478	386788	-	L22454|NRF1|4899|nuclear respiratory factor 1##NM_001040110|NRF1|4899|nuclear respiratory factor 1##AK293351|NRF1|4899|nuclear respiratory factor 1##BC016925|NRF1|4899|nuclear respiratory factor 1##AK290891|NRF1|4899|nuclear respiratory factor 1##NM_005011|NRF1|4899|nuclear respiratory factor 1##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC000190|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AJ537494|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AM393415|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC011551|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AF151050|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK001317|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK022373|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_016478|ZC3HC1|51530|zinc finger, C3HC-type containing 1	0.491375	CTCF.p2:0:0.491
chr4	123498096	123498242	reg1011686.p1	10.961	+	AF532913 AY283686 AY523040 DQ231169 S77835 AB451325 AB451454 AB591003 CU688118 DQ861285 AF228636 BC066254 BC066255 BC066256 BC066257 BC070338 S77834 U25676 V00564 NM_000586 X01586	-120583	-	NM_001159285 NM_001159295 BC040229 AK093297 AX748040	-197537	+	NM_139243 AK057303	-198026	+	CU688120 CU688122 DQ645417 BC069124 BC066258 BC066259 BC066260 BC066261 BC066262 NM_001207006 NM_021803 AF254069	44019	-	AK123553 NM_001178007 NM_152618 BC055426 TSC_hg19_v1_chr4_+_123653916 BX538148	155736	+	TSC_hg19_v1_chr4_+_123747833 J04513 NM_002006 BC111737 BC118573 BC118654	249675	+	AF532913|IL2|3558|interleukin 2##AY283686|IL2|3558|interleukin 2##AY523040|IL2|3558|interleukin 2##DQ231169|IL2|3558|interleukin 2##S77835|IL2|3558|interleukin 2##AB451325|IL2|3558|interleukin 2##AB451454|IL2|3558|interleukin 2##DQ861285|IL2|3558|interleukin 2##AF228636|IL2|3558|interleukin 2##BC066254|IL2|3558|interleukin 2##BC066255|IL2|3558|interleukin 2##BC066256|IL2|3558|interleukin 2##BC066257|IL2|3558|interleukin 2##BC070338|IL2|3558|interleukin 2##S77834|IL2|3558|interleukin 2##U25676|IL2|3558|interleukin 2##V00564|IL2|3558|interleukin 2##NM_000586|IL2|3558|interleukin 2##X01586|IL2|3558|interleukin 2##NM_001159285|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##NM_001159295|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##BC040229|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK093297|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##NM_139243|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK057303|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##DQ645417|IL21|59067|interleukin 21##BC069124|IL21|59067|interleukin 21##BC066258|IL21|59067|interleukin 21##BC066259|IL21|59067|interleukin 21##BC066260|IL21|59067|interleukin 21##BC066261|IL21|59067|interleukin 21##BC066262|IL21|59067|interleukin 21##NM_001207006|IL21|59067|interleukin 21##NM_021803|IL21|59067|interleukin 21##AF254069|IL21|59067|interleukin 21##AK123553|BBS12|166379|Bardet-Biedl syndrome 12##NM_001178007|BBS12|166379|Bardet-Biedl syndrome 12##NM_152618|BBS12|166379|Bardet-Biedl syndrome 12##BC055426|BBS12|166379|Bardet-Biedl syndrome 12##BX538148|BBS12|166379|Bardet-Biedl syndrome 12##J04513|FGF2|2247|fibroblast growth factor 2 (basic)##NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)##BC111737|FGF2|2247|fibroblast growth factor 2 (basic)	0.91137	CTCF.p2:13:0.911
chr8	135274008	135274121	reg1009534.p1	10.961	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-689967	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-964567	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1070734	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	434730	-	TSC_hg19_v1_chr8_-_135725053 AB463359	451015	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	451210	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.899685	CTCF.p2:7:0.900
chr19	9247294	9247401	reg1008175.p1	10.960	+	NM_001001958	-9722	-	NM_001005192	-20909	-	NM_001005193	-33366	-	TSC_hg19_v1_chr19_+_9251103 NM_001190791 NM_020933 AF148135 AF275255 AK056570 AK314560 BC078154 BC009367 AL834126 AK304871 AK304151	3746	+	BC001685 TSC_hg19_v1_chr19_+_9271396	24034	+	AK095468 NM_175883	48922	+	NM_001001958|OR7G3|390883|olfactory receptor, family 7, subfamily G, member 3##NM_001005192|OR7G1|125962|olfactory receptor, family 7, subfamily G, member 1##NM_001005193|OR7G2|390882|olfactory receptor, family 7, subfamily G, member 2##NM_001190791|ZNF317|57693|zinc finger protein 317##NM_020933|ZNF317|57693|zinc finger protein 317##AF148135|ZNF317|57693|zinc finger protein 317##AF275255|ZNF317|57693|zinc finger protein 317##AK056570|ZNF317|57693|zinc finger protein 317##AK314560|ZNF317|57693|zinc finger protein 317##BC078154|ZNF317|57693|zinc finger protein 317##BC009367|ZNF317|57693|zinc finger protein 317##AL834126|ZNF317|57693|zinc finger protein 317##AK304871|ZNF317|57693|zinc finger protein 317##AK304151|ZNF317|57693|zinc finger protein 317##AK095468|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2##NM_175883|OR7D2|162998|olfactory receptor, family 7, subfamily D, member 2	0.973555	CTCF.p2:-4:0.974
chr14	20795564	20795688	reg1009289.p1	10.959	+	TSC_hg19_v1_chr14_-_20774154 AK074553 NM_138376	-21485	-	BX248066 BC008647 EU832467 TSC_hg19_v1_chr14_-_20774111 BC030822 BX640732 BC053538 BX648584	-21519	-	BC137054 BC137055 AB529289 NM_001004479	-84703	+	BC000369 BC001218 BC004435 NM_182852 BX161423 NM_182851 BX161424	1909	-	TSC_hg19_v1_chr14_-_20801439 AK026233 AK225451 AK309183 AK225253 AK226037 AL161994 NM_021178 NM_182849	5818	-	TSC_hg19_v1_chr14_+_20811783 NM_001042618 NM_005484	16121	+	AK074553|TTC5|91875|tetratricopeptide repeat domain 5##NM_138376|TTC5|91875|tetratricopeptide repeat domain 5##BX248066|TTC5|91875|tetratricopeptide repeat domain 5##BC008647|TTC5|91875|tetratricopeptide repeat domain 5##EU832467|TTC5|91875|tetratricopeptide repeat domain 5##BC030822|TTC5|91875|tetratricopeptide repeat domain 5##BX640732|TTC5|91875|tetratricopeptide repeat domain 5##BC053538|TTC5|91875|tetratricopeptide repeat domain 5##BX648584|TTC5|91875|tetratricopeptide repeat domain 5##BC137054|OR11H4|390442|olfactory receptor, family 11, subfamily H, member 4##BC137055|OR11H4|390442|olfactory receptor, family 11, subfamily H, member 4##NM_001004479|OR11H4|390442|olfactory receptor, family 11, subfamily H, member 4##BC000369|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##BC001218|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##BC004435|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##NM_182852|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##BX161423|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##NM_182851|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##BX161424|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##AK026233|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##AK225451|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##AK309183|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##AK225253|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##AK226037|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##AL161994|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##NM_021178|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##NM_182849|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##NM_001042618|PARP2|10038|poly (ADP-ribose) polymerase 2##NM_005484|PARP2|10038|poly (ADP-ribose) polymerase 2	0.999071	CTCF.p2:-4:0.999
chr2	141344094	141344227	reg1011665.p1	10.958	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-1806354	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-2084670	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-2084767	+	TSC_hg19_v1_chr2_-_142888540 AK054663	1544396	-	AF176832 NM_018557	1545109	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	2291046	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.103307	
chr17	60749788	60749895	reg1008444.p1	10.957	+	TSC_hg19_v1_chr17_+_60705060 BC150212 AF107292 AB384513	-44734	+	BC146647 TSC_hg19_v1_chr17_+_60705048 AF134838	-44796	+	TSC_hg19_v1_chr17_+_60704751 AB014609 BC153884 NM_006039	-45084	+	NM_001100875 BC035021	134170	-	AK122947 AK093076 AX747906 BX648705 NM_152598	135836	-	NM_025185	337056	+	BC150212|MRC2|9902|mannose receptor, C type 2##AF107292|MRC2|9902|mannose receptor, C type 2##BC146647|MRC2|9902|mannose receptor, C type 2##AF134838|MRC2|9902|mannose receptor, C type 2##AB014609|MRC2|9902|mannose receptor, C type 2##BC153884|MRC2|9902|mannose receptor, C type 2##NM_006039|MRC2|9902|mannose receptor, C type 2##NM_001100875|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC035021|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	0.98032	CTCF.p2:6:0.980
chr3	168867218	168867335	reg1009509.p1	10.957	+	BX640908 NM_001164000	-1755	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	-2914	-	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	-3197	-	BC069498 GQ352634 U43292 AK304098 NM_001205194 NM_004991	514213	-	BC128029 TSC_hg19_v1_chr3_-_169482848	615572	-	BC007289 AK055346 NM_032487	620366	-	BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus##BC069498|MECOM|2122|MDS1 and EVI1 complex locus##GQ352634|MECOM|2122|MDS1 and EVI1 complex locus##U43292|MECOM|2122|MDS1 and EVI1 complex locus##AK304098|MECOM|2122|MDS1 and EVI1 complex locus##NM_001205194|MECOM|2122|MDS1 and EVI1 complex locus##NM_004991|MECOM|2122|MDS1 and EVI1 complex locus##BC128029|TERC|7012|telomerase RNA component##BC007289|ARPM1|84517|actin related protein M1##AK055346|ARPM1|84517|actin related protein M1##NM_032487|ARPM1|84517|actin related protein M1	0.534164	CTCF.p2:0:0.534
chr9	22452555	22452674	reg1007893.p1	10.957	+	AJ290954 TSC_hg19_v1_chr9_+_22447458 AK130018	-5165	+	AB464510 TSC_hg19_v1_chr9_+_22447162	-5501	+	TSC_hg19_v1_chr9_+_22446846 AK096011 NM_022160 BC130435 BC130437	-5777	+	BC030692 NM_001171197	1368863	-	TSC_hg19_v1_chr9_-_23821819 BC035004	1369199	-	BC042393 NM_001171195 TSC_hg19_v1_chr9_-_23821847	1369230	-	AJ290954|DMRTA1|63951|DMRT-like family A1##AK130018|DMRTA1|63951|DMRT-like family A1##AK096011|DMRTA1|63951|DMRT-like family A1##NM_022160|DMRTA1|63951|DMRT-like family A1##BC130435|DMRTA1|63951|DMRT-like family A1##BC130437|DMRTA1|63951|DMRT-like family A1##BC030692|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171197|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC035004|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC042393|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171195|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	0.98552	CTCF.p2:-6:0.986
chr16	33458963	33459088	reg1008479.p1	10.956	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-196892	+	AL133588 NM_016212	-197511	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-253427	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	13196247	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	13196281	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	13264037	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.980009	CTCF.p2:11:0.980
chr4	115101787	115101893	reg1008752.p1	10.956	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-201001	-	TSC_hg19_v1_chr4_-_114682923 NM_001221 NM_172114 NM_172115 NM_172127 NM_172128 NM_172129	-418870	-	TSC_hg19_v1_chr4_-_114682619 AK055642 AB209288	-419184	-	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	417743	+	NM_003360 U30930	441682	+	BC113075 BC012326 AK289670 AB036429 NM_022569	933141	-	AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##NM_001221|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172114|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172115|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172127|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172128|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172129|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK055642|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AB209288|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	1.016252	CTCF.p2:18:0.999
chr12	50261006	50261140	reg1011099.p1	10.955	+	CU690986 BC053560 BC040957 AK292194 NM_181708	-24184	-	TSC_hg19_v1_chr12_-_50222197 NM_001037806	-38874	-	TSC_hg19_v1_chr12_+_50156978 AK026605	-104045	+	CU674012 AB463040 TSC_hg19_v1_chr12_-_50297671 AB023167 BC000051 AK290031 AF190461 NM_012306	36594	-	AK225940 NM_000486 BC042496 S73196 S73197 CR542024	83495	+	NM_001651	94205	+	BC053560|BCDIN3D|144233|BCDIN3 domain containing##BC040957|BCDIN3D|144233|BCDIN3 domain containing##AK292194|BCDIN3D|144233|BCDIN3 domain containing##NM_181708|BCDIN3D|144233|BCDIN3 domain containing##NM_001037806|NCKAP5L|57701|NCK-associated protein 5-like##AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AB023167|FAIM2|23017|Fas apoptotic inhibitory molecule 2##BC000051|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AK290031|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AF190461|FAIM2|23017|Fas apoptotic inhibitory molecule 2##NM_012306|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AK225940|AQP2|359|aquaporin 2 (collecting duct)##NM_000486|AQP2|359|aquaporin 2 (collecting duct)##BC042496|AQP2|359|aquaporin 2 (collecting duct)##S73196|AQP2|359|aquaporin 2 (collecting duct)##S73197|AQP2|359|aquaporin 2 (collecting duct)##CR542024|AQP2|359|aquaporin 2 (collecting duct)##NM_001651|AQP5|362|aquaporin 5	0.983941	CTCF.p2:4:0.984
chr12	56423615	56423729	reg1009195.p2	10.955	+	NM_022465 AK122880	-8913	+	TSC_hg19_v1_chr12_+_56391069 NM_000456 NM_001032386 NM_001032387 AK312763 AK309669	-32603	+	AK292597 AK296517 TSC_hg19_v1_chr12_+_56367884 BC065298 BC056422	-55764	+	NM_001029 BC002604	12031	+	NM_001982 M34309 NM_001005915 TSC_hg19_v1_chr12_+_56473925	50195	+	TSC_hg19_v1_chr12_+_56473948 AK300909 AK294719 AK291681 BC082992 M29366 S61953 BC002706 CU678138 BT007226	50342	+	NM_022465|IKZF4|64375|IKAROS family zinc finger 4 (Eos)##AK122880|IKZF4|64375|IKAROS family zinc finger 4 (Eos)##NM_000456|SUOX|6821|sulfite oxidase##NM_001032386|SUOX|6821|sulfite oxidase##NM_001032387|SUOX|6821|sulfite oxidase##AK312763|SUOX|6821|sulfite oxidase##AK292597|RAB5B|5869|RAB5B, member RAS oncogene family##AK296517|RAB5B|5869|RAB5B, member RAS oncogene family##BC065298|RAB5B|5869|RAB5B, member RAS oncogene family##BC056422|RAB5B|5869|RAB5B, member RAS oncogene family##NM_001029|RPS26|6231|ribosomal protein S26##BC002604|RPS26|6231|ribosomal protein S26##NM_001982|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##M34309|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##NM_001005915|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##AK300909|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##AK294719|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##AK291681|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##BC082992|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##M29366|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##S61953|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##BC002706|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##BT007226|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	0.802766	CTCF.p2:-1:0.803
chr15	102181474	102181597	reg1008782.p2	10.953	+	TSC_hg19_v1_chr15_-_102030140 NM_002570 NM_138319 NM_138320 NM_138321 NM_138322 NM_138323 NM_138324 NM_138325	-151373	-	TSC_hg19_v1_chr15_-_102029995 M80482 M80482	-151502	-	TSC_hg19_v1_chr15_-_102029982 D87993 D87994 D87995	-151580	-	TSC_hg19_v1_chr15_-_102192580 BC006150 BC008873 AF353992 AK315584 AK297048 AK026257 AK296553 NM_025141 NM_078474	10931	-	TSC_hg19_v1_chr15_-_102264638 BC132671 BC136315 BC143943 AK056653 AX721055 NM_152334	83120	-	BC137002 BC137003 NM_001005326	164376	+	NM_002570|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138319|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138320|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138321|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138322|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138323|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138324|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138325|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87993|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87994|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87995|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##BC006150|TM2D3|80213|TM2 domain containing 3##BC008873|TM2D3|80213|TM2 domain containing 3##AF353992|TM2D3|80213|TM2 domain containing 3##AK315584|TM2D3|80213|TM2 domain containing 3##AK297048|TM2D3|80213|TM2 domain containing 3##AK026257|TM2D3|80213|TM2 domain containing 3##AK296553|TM2D3|80213|TM2 domain containing 3##NM_025141|TM2D3|80213|TM2 domain containing 3##NM_078474|TM2D3|80213|TM2 domain containing 3##BC132671|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC136315|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC143943|TARSL2|123283|threonyl-tRNA synthetase-like 2##AK056653|TARSL2|123283|threonyl-tRNA synthetase-like 2##NM_152334|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	0.08919	
chr22	39739638	39739763	reg1010761.p1	10.953	+	BC014017 BC013674 BC013861 BC015032 BC015767 BC088373 BC063662 BC071666 CR456566 BC006483 BC012146 BC012786 TSC_hg19_v1_chr22_-_39715629 AK092695 AK297711 AK315693 AX747675 BC008492 BC107711 D28415 NM_000967 NM_001033853	-24061	-	NM_002608 X02811 TSC_hg19_v1_chr22_-_39640988 M12783	-98693	-	CR541807 CU013138 CU013426 AB590092 TSC_hg19_v1_chr22_-_39639984 CR456538 X02744	-99675	-	TSC_hg19_v1_chr22_+_39745981 NM_004711 NM_145731 BC000731 AK295863 CR456590 AK289507 AB209372 CU013190 CU013478 AB587338 AJ002304 AJ002305 BT007135 CU674372	6205	+	AJ002303 NM_145738	20474	+	BC050554 NM_006116 NM_153497 TSC_hg19_v1_chr22_+_39795796 AK296314 BC038582 AF425640 AK312456 U49928	56070	+	BC014017|RPL3|6122|ribosomal protein L3##BC013674|RPL3|6122|ribosomal protein L3##BC013861|RPL3|6122|ribosomal protein L3##BC015032|RPL3|6122|ribosomal protein L3##BC015767|RPL3|6122|ribosomal protein L3##BC088373|RPL3|6122|ribosomal protein L3##BC063662|RPL3|6122|ribosomal protein L3##BC071666|RPL3|6122|ribosomal protein L3##CR456566|RPL3|6122|ribosomal protein L3##BC006483|RPL3|6122|ribosomal protein L3##BC012146|RPL3|6122|ribosomal protein L3##BC012786|RPL3|6122|ribosomal protein L3##AK092695|RPL3|6122|ribosomal protein L3##AK297711|RPL3|6122|ribosomal protein L3##AK315693|RPL3|6122|ribosomal protein L3##BC008492|RPL3|6122|ribosomal protein L3##BC107711|RPL3|6122|ribosomal protein L3##NM_000967|RPL3|6122|ribosomal protein L3##NM_001033853|RPL3|6122|ribosomal protein L3##NM_002608|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02811|PDGFB|5155|platelet-derived growth factor beta polypeptide##M12783|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR541807|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013138|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013426|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR456538|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02744|PDGFB|5155|platelet-derived growth factor beta polypeptide##NM_004711|SYNGR1|9145|synaptogyrin 1##NM_145731|SYNGR1|9145|synaptogyrin 1##BC000731|SYNGR1|9145|synaptogyrin 1##AK295863|SYNGR1|9145|synaptogyrin 1##CR456590|SYNGR1|9145|synaptogyrin 1##AK289507|SYNGR1|9145|synaptogyrin 1##CU013190|SYNGR1|9145|synaptogyrin 1##CU013478|SYNGR1|9145|synaptogyrin 1##AJ002304|SYNGR1|9145|synaptogyrin 1##AJ002305|SYNGR1|9145|synaptogyrin 1##BT007135|SYNGR1|9145|synaptogyrin 1##AJ002303|SYNGR1|9145|synaptogyrin 1##NM_145738|SYNGR1|9145|synaptogyrin 1##BC050554|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_006116|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_153497|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK296314|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##BC038582|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AF425640|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK312456|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##U49928|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1	0.942141	CTCF.p2:0:0.942
chr8	90860565	90860713	reg1010765.p1	10.953	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	-90355	+	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	-90609	+	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	-1520893	-	AF061326 NM_004337	53456	+	BC031054 NM_001126111 TSC_hg19_v1_chr8_+_90914816	54155	+	TSC_hg19_v1_chr8_-_90996804 AB528582 BC143065 BC143066 BC108650 BC016762 BC005293 AF058696 AF051334 AK223256 BC146797 BC136802 BC136803 BC144413	136193	-	AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AF061326|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_004337|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##BC031054|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_001126111|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##BC143065|NBN|4683|nibrin##BC143066|NBN|4683|nibrin##BC108650|NBN|4683|nibrin##BC016762|NBN|4683|nibrin##BC005293|NBN|4683|nibrin##AF058696|NBN|4683|nibrin##AF051334|NBN|4683|nibrin##AK223256|NBN|4683|nibrin##BC146797|NBN|4683|nibrin##BC136802|NBN|4683|nibrin##BC136803|NBN|4683|nibrin##BC144413|NBN|4683|nibrin	0.822463	CTCF.p2:-11:0.822
chr8	67372131	67372243	reg1008625.p1	10.952	+	NM_144650 AY033237 AK056992 AK300881 BC047492 BC064634 AK293530 AK300243 AK294114 BC110290	-27455	+	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	-30881	+	BC002599 BC011031 AK075431 NM_000756	-281420	-	NM_152765	33303	+	BC032233 NM_001080416 NM_001144755 TSC_hg19_v1_chr8_-_67525502	153287	-	AM392649 AM393766 TSC_hg19_v1_chr8_-_67579266	207044	-	NM_144650|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AY033237|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK056992|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300881|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC047492|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC064634|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK293530|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300243|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK294114|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC110290|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone##NM_152765|C8orf46|254778|chromosome 8 open reading frame 46##BC032233|LOC645895|645895|uncharacterized LOC645895##NM_001080416|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1##NM_001144755|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1##AM392649|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##AM393766|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1	0.4617	CTCF.p2:-6:0.462
chr12	4216700	4216836	reg1006052.p1	10.951	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-234268	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-354386	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-354500	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	166276	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	213623	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	272032	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.998921	CTCF.p2:-35:0.999
chr1	168606768	168606878	reg1007834.p1	10.950	+	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-61031	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	-93606	-	AJ010277 NM_005149 BC093664 BC093666 EU446671	-356521	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	91606	-	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	469146	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	730269	-	NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##AJ010277|TBX19|9095|T-box 19##NM_005149|TBX19|9095|T-box 19##BC093664|TBX19|9095|T-box 19##BC093666|TBX19|9095|T-box 19##EU446671|TBX19|9095|T-box 19##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)	0.770561	CTCF.p2:1:0.771
chr1	226796553	226796685	reg1008285.p2	10.950	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-60002	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-60118	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-200816	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	130319	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	261661	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	331327	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.964666	CTCF.p2:0:0.965
chr1	48667955	48668073	reg1008984.p1	10.950	+	NM_001194986	-205453	-	AF042832 NM_004474	-766326	+	AF275722 NM_012186	-786271	+	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	20378	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	269664	-	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	269831	-	NM_001194986|LOC388630|388630|UPF0632 protein A##AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6	0.838752	CTCF.p2:11:0.839
chr9	87283308	87283440	reg1010191.p1	10.950	+	AF305210 NM_022127	-299962	-	BC093821 BC093823 AK310861 AK304406 AK314039 AK292849 NM_001199633	-327740	-	NM_024945 TSC_hg19_v1_chr9_+_86595689 BC039999 BC020606 AK022950 BC044571 BC053549 BC032494	-687665	+	TSC_hg19_v1_chr9_+_87283453 BC075804 NM_001018064 NM_006180 AB209118	87	+	TSC_hg19_v1_chr9_+_87284577 NM_001018065 NM_001018066	1209	+	NM_001007097 TSC_hg19_v1_chr9_+_87284627	1252	+	AF305210|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_022127|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093821|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093823|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK310861|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK304406|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK314039|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK292849|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_001199633|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_024945|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC039999|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC020606|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##AK022950|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC044571|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC053549|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC032494|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC075804|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018064|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_006180|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB209118|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018065|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018066|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001007097|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	0.0	
chr1	150505149	150505266	reg1008949.p1	10.949	+	AK292435 TSC_hg19_v1_chr1_+_150480584 AK301369 AK316390 AK302279 U65932 DQ893011 DQ896257	-24573	+	NM_001202858 NM_004425 NM_022664 TSC_hg19_v1_chr1_+_150480582 AK097205 AK097046 BC023505 DQ010946 DQ112074 U68186 U68187	-24673	+	TSC_hg19_v1_chr1_+_150459916 AK225368 BC009997 NM_025150 AB384782 BC007824	-45275	+	TSC_hg19_v1_chr1_+_150521883 AF289612 NM_019032 NM_025008	16647	+	AB385142 AF203373 BT006640 CU677857 DQ890628 DQ893795 FJ917536 TSC_hg19_v1_chr1_-_150552076 AF118124 BC017197 BC071897 L08246 AK300499 BC107735 AK294462	46833	-	TSC_hg19_v1_chr1_-_150552077 AK316267 AK297217 AK304775 AK312508	46874	-	AK292435|ECM1|1893|extracellular matrix protein 1##AK301369|ECM1|1893|extracellular matrix protein 1##AK316390|ECM1|1893|extracellular matrix protein 1##AK302279|ECM1|1893|extracellular matrix protein 1##U65932|ECM1|1893|extracellular matrix protein 1##DQ893011|ECM1|1893|extracellular matrix protein 1##DQ896257|ECM1|1893|extracellular matrix protein 1##NM_001202858|ECM1|1893|extracellular matrix protein 1##NM_004425|ECM1|1893|extracellular matrix protein 1##NM_022664|ECM1|1893|extracellular matrix protein 1##AK097205|ECM1|1893|extracellular matrix protein 1##AK097046|ECM1|1893|extracellular matrix protein 1##BC023505|ECM1|1893|extracellular matrix protein 1##U68186|ECM1|1893|extracellular matrix protein 1##U68187|ECM1|1893|extracellular matrix protein 1##AK225368|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##BC009997|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##NM_025150|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##BC007824|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AF289612|ADAMTSL4|54507|ADAMTS-like 4##NM_019032|ADAMTSL4|54507|ADAMTS-like 4##NM_025008|ADAMTSL4|54507|ADAMTS-like 4##AF203373|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BT006640|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##DQ890628|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##DQ893795|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##FJ917536|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AF118124|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC017197|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC071897|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##L08246|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK300499|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC107735|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK294462|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK316267|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK297217|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK304775|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK312508|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)	0.011208	
chr1	203236525	203236671	reg1009984.p1	10.949	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-37783	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-80672	-	BC008568 TSC_hg19_v1_chr1_-_203155877 AK312911	-80710	-	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	38091	+	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	80786	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	83611	-	U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.975	CTCF.p2:-23:0.975
chr17	10521531	10521669	reg1011514.p1	10.949	+	NM_001100112 BC093082 AK299440 AK300702 AK308102 BX510904 NM_017534	-68623	-	AK310004 NM_005963	-99742	-	AF111783 NM_017533	-148725	-	NM_002470 TSC_hg19_v1_chr17_-_10560627	39027	-	TSC_hg19_v1_chr17_-_10600869 DQ891605 DQ894798 AF026852 AF183424 BC015504 AK098826 AK315595 AK074588 NM_004589	79253	-	NM_020233 BC070155 AB073393 AK292629 BC001294	79348	+	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult##NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult##AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_002470|MYH3|4621|myosin, heavy chain 3, skeletal muscle, embryonic##DQ891605|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##DQ894798|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF026852|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF183424|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##BC015504|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK098826|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK315595|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK074588|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_004589|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_020233|C17orf48|56985|chromosome 17 open reading frame 48##BC070155|C17orf48|56985|chromosome 17 open reading frame 48##AB073393|C17orf48|56985|chromosome 17 open reading frame 48##AK292629|C17orf48|56985|chromosome 17 open reading frame 48##BC001294|C17orf48|56985|chromosome 17 open reading frame 48	0.998515	CTCF.p2:19:0.999
chr2	206750443	206750563	reg1008997.p2	10.948	+	TSC_hg19_v1_chr2_+_206547371 AK290934	-203142	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	-203325	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-1339784	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	200408	-	AK295987 NM_001199984	273414	-	X61100 AK098395 BC018900 BC022368 TSC_hg19_v1_chr2_-_207024145 AK300585 BC030833 AK295705 AK295966 AK298320 BC004133 NM_001199981 NM_001199982 NM_001199983 NM_005006	273669	-	AK290934|NRP2|8828|neuropilin 2##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D##AK295987|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199984|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	0.136632	
chr2	35635656	35635760	reg1009332.p2	10.948	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-1811363	-	AB020653 NM_015376	-1896767	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-1934012	+	TSC_hg19_v1_chr2_+_36582920 AY358371	947254	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	947694	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	1189574	-	BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	0.997557	CTCF.p2:-2:0.998
chr3	50473625	50473760	reg1012384.p1	10.948	+	TSC_hg19_v1_chr3_-_50396943 NM_007024 AK314166	-76754	-	BC017367 TSC_hg19_v1_chr3_-_50396920 BC011948	-76782	-	BC008802 NM_006545	-85207	-	AJ251367 AJ251368 AB011130 BC152438 AB383908 NM_001005505 NM_001174051 NM_006030 AF040709 AF042792 AK310138 TSC_hg19_v1_chr3_-_50541066	67268	-	AK124438 AK311093 TSC_hg19_v1_chr3_-_50605192 BC034766 AK313128 AK308074 AK309486 AL833938 AK130227 NM_001171740 NM_001171743 NM_016210	131451	-	TSC_hg19_v1_chr3_+_50606919 BX537562 NM_016173 AK314023 AF172244 AK124369	133256	+	NM_007024|TMEM115|11070|transmembrane protein 115##AK314166|TMEM115|11070|transmembrane protein 115##BC017367|TMEM115|11070|transmembrane protein 115##BC011948|TMEM115|11070|transmembrane protein 115##BC008802|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##NM_006545|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##AJ251367|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AJ251368|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AB011130|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##BC152438|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_001005505|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_001174051|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_006030|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AF040709|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AF042792|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AK310138|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AK124438|C3orf18|51161|chromosome 3 open reading frame 18##AK311093|C3orf18|51161|chromosome 3 open reading frame 18##BC034766|C3orf18|51161|chromosome 3 open reading frame 18##AK313128|C3orf18|51161|chromosome 3 open reading frame 18##AK308074|C3orf18|51161|chromosome 3 open reading frame 18##AK309486|C3orf18|51161|chromosome 3 open reading frame 18##AL833938|C3orf18|51161|chromosome 3 open reading frame 18##AK130227|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171740|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171743|C3orf18|51161|chromosome 3 open reading frame 18##NM_016210|C3orf18|51161|chromosome 3 open reading frame 18##BX537562|HEMK1|51409|HemK methyltransferase family member 1##NM_016173|HEMK1|51409|HemK methyltransferase family member 1##AK314023|HEMK1|51409|HemK methyltransferase family member 1##AF172244|HEMK1|51409|HemK methyltransferase family member 1##AK124369|HEMK1|51409|HemK methyltransferase family member 1	0.998597	CTCF.p2:-9:0.999
chr1	211526362	211526483	reg1009804.p1	10.947	+	BC029600 NM_145759	-6717	+	TSC_hg19_v1_chr1_+_211500174 AK295766 AK303286 AB000509	-26235	+	NM_001033910 TSC_hg19_v1_chr1_+_211500158	-26269	+	TSC_hg19_v1_chr1_+_211556144 AK130858	29725	+	TSC_hg19_v1_chr1_+_211556168 BC005997	29746	+	AY191519 NM_001164688 NM_183059	139836	-	BC029600|TRAF5|7188|TNF receptor-associated factor 5##NM_145759|TRAF5|7188|TNF receptor-associated factor 5##AK295766|TRAF5|7188|TNF receptor-associated factor 5##AK303286|TRAF5|7188|TNF receptor-associated factor 5##AB000509|TRAF5|7188|TNF receptor-associated factor 5##NM_001033910|TRAF5|7188|TNF receptor-associated factor 5##AK130858|LINC00467|84791|long intergenic non-protein coding RNA 467##BC005997|LINC00467|84791|long intergenic non-protein coding RNA 467##AY191519|RD3|343035|retinal degeneration 3##NM_001164688|RD3|343035|retinal degeneration 3##NM_183059|RD3|343035|retinal degeneration 3	0.973141	CTCF.p2:0:0.973
chr12	53459847	53459975	reg1009911.p1	10.947	+	TSC_hg19_v1_chr12_-_53448212 AK096472	-11714	-	AF518729 CR936725 NM_170754 BX647126 AK131320 BC142668 BC142712 AB384104	-16011	+	AK172747 TSC_hg19_v1_chr12_+_53442984	-16920	+	BC136312 AK027706 TSC_hg19_v1_chr12_-_53473165	13238	-	TSC_hg19_v1_chr12_-_53473167 AK074694	13257	-	TSC_hg19_v1_chr12_-_53473175 AK294092 NM_032840	13276	-	AK096472|LOC283335|283335|uncharacterized LOC283335##AF518729|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)##CR936725|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)##NM_170754|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)##BX647126|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)##AK131320|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)##BC142668|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)##BC142712|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)##AK172747|TENC1|23371|tensin like C1 domain containing phosphatase (tensin 2)##BC136312|SPRYD3|84926|SPRY domain containing 3##AK027706|SPRYD3|84926|SPRY domain containing 3##AK074694|SPRYD3|84926|SPRY domain containing 3##AK294092|SPRYD3|84926|SPRY domain containing 3##NM_032840|SPRYD3|84926|SPRY domain containing 3	0.981258	CTCF.p2:-11:0.981
chr15	84910847	84910956	reg1011356.p1	10.947	+	NM_001243531	-69660	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-588074	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-794673	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	233380	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	286571	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	286605	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	0.823666	CTCF.p2:-3:0.800
chr7	40369290	40369404	reg1007841.p1	10.947	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-194738	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-194816	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	-195216	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	1373338	-	NM_000168	1907270	-	TSC_hg19_v1_chr7_-_42276797 AK308429	1907448	-	AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3	0.863125	CTCF.p2:1:0.863
chr16	83859830	83859947	reg1009592.p1	10.946	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	-18232	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	-18288	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-1199219	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	72881	+	NM_182981 TSC_hg19_v1_chr16_+_83986844 AK290383 AY258068 AY037158 BC020434 BC032476 BC093687 BC113417	126996	+	TSC_hg19_v1_chr16_+_84002230 AY299331 NM_019065 BC131615 AK127376	142324	+	BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase##NM_182981|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK290383|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY258068|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY037158|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC020434|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC032476|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC093687|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC113417|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY299331|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_019065|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##BC131615|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##AK127376|NECAB2|54550|N-terminal EF-hand calcium binding protein 2	0.999907	CTCF.p2:-3:1.000
chr17	38771667	38771848	reg1007724.p1	10.946	+	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	-50039	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	-113911	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-171938	+	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	32313	-	BC069196 TSC_hg19_v1_chr17_-_38804818	33039	-	BX538083 EU832123 EU832217 BC032815 AK092967 AK308598 NM_152349	49593	-	BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC069196|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BX538083|KRT222|125113|keratin 222##EU832123|KRT222|125113|keratin 222##EU832217|KRT222|125113|keratin 222##BC032815|KRT222|125113|keratin 222##AK308598|KRT222|125113|keratin 222##NM_152349|KRT222|125113|keratin 222	0.354942	CTCF.p2:55:0.355
chr2	241377790	241377908	reg1010481.p1	10.946	+	TSC_hg19_v1_chr2_+_241375269 AK223516 BC045712	-2584	+	TSC_hg19_v1_chr2_+_241375207 BC027997	-2638	+	TSC_hg19_v1_chr2_+_241375079 BC051279 NM_002081 X54232	-2769	+	AK125881 TSC_hg19_v1_chr2_-_241495084	117181	-	AB034636 BC073146 BC036111 TSC_hg19_v1_chr2_-_241497400	119534	-	AK000506 AK225534 NM_016552 NM_017844 TSC_hg19_v1_chr2_-_241497404	119555	-	AK223516|GPC1|2817|glypican 1##BC045712|GPC1|2817|glypican 1##BC027997|GPC1|2817|glypican 1##BC051279|GPC1|2817|glypican 1##NM_002081|GPC1|2817|glypican 1##X54232|GPC1|2817|glypican 1##AK125881|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AB034636|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##BC073146|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##BC036111|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK000506|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK225534|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_016552|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_017844|ANKMY1|51281|ankyrin repeat and MYND domain containing 1	0.999585	CTCF.p2:11:1.000
chr3	17686708	17686828	reg1009455.p1	10.946	+	BC036392 NM_015184	-712187	+	AB029015 NM_001144382	-760317	+	U65918 U66726 U66078 BC027595 NM_001351	-1039802	-	AK310539 NM_001134381	54743	-	D86965 NM_014744	95630	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	97399	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.962937	CTCF.p2:1:0.963
chr4	75000076	75000208	reg1012215.p1	10.946	+	NM_002089 TSC_hg19_v1_chr4_-_74965027	-35120	-	CR542171 CU677427 AB590957 X53799 M57731 BC015753 BC053653 TSC_hg19_v1_chr4_-_74964913 AK308504 M36820 AK311304 BC005276	-35267	-	AB590406 EU176452 EU831482 EU831569 X53800 BC016308 BC065743 M36821 AK307064 TSC_hg19_v1_chr4_-_74904407 NM_002090 AK311367	-95716	-	TSC_hg19_v1_chr4_+_75023834 AX794782 BC037529 NM_001144978 BC041943 AX794779	23723	+	AK289455 BC127938 BC127939 DQ235269 AY358920 NM_001013442 DQ235264 DQ235265 DQ235266 DQ235267 DQ235268	174077	+	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	230798	+	NM_002089|CXCL2|2920|chemokine (C-X-C motif) ligand 2##CR542171|CXCL2|2920|chemokine (C-X-C motif) ligand 2##X53799|CXCL2|2920|chemokine (C-X-C motif) ligand 2##M57731|CXCL2|2920|chemokine (C-X-C motif) ligand 2##BC015753|CXCL2|2920|chemokine (C-X-C motif) ligand 2##BC053653|CXCL2|2920|chemokine (C-X-C motif) ligand 2##M36820|CXCL2|2920|chemokine (C-X-C motif) ligand 2##EU176452|CXCL3|2921|chemokine (C-X-C motif) ligand 3##EU831482|CXCL3|2921|chemokine (C-X-C motif) ligand 3##EU831569|CXCL3|2921|chemokine (C-X-C motif) ligand 3##X53800|CXCL3|2921|chemokine (C-X-C motif) ligand 3##BC016308|CXCL3|2921|chemokine (C-X-C motif) ligand 3##BC065743|CXCL3|2921|chemokine (C-X-C motif) ligand 3##M36821|CXCL3|2921|chemokine (C-X-C motif) ligand 3##AK307064|CXCL3|2921|chemokine (C-X-C motif) ligand 3##NM_002090|CXCL3|2921|chemokine (C-X-C motif) ligand 3##AK311367|CXCL3|2921|chemokine (C-X-C motif) ligand 3##BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##AK289455|EPGN|255324|epithelial mitogen homolog (mouse)##BC127938|EPGN|255324|epithelial mitogen homolog (mouse)##BC127939|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235269|EPGN|255324|epithelial mitogen homolog (mouse)##AY358920|EPGN|255324|epithelial mitogen homolog (mouse)##NM_001013442|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235264|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235265|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235266|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235267|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235268|EPGN|255324|epithelial mitogen homolog (mouse)##AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin	0.591326	CTCF.p2:20:0.591
chr8	134508774	134508888	reg1009130.p1	10.946	+	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-199334	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-305501	+	NM_001045556 NM_001045557	-393522	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	75266	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1199963	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1216248	-	AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.42062	CTCF.p2:-2:0.421
chr12	126554220	126554362	reg1011101.p1	10.945	+	NM_052907	-743130	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-1004223	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-1004350	+	NM_001136103	2197656	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	2754152	-	BC043528 TSC_hg19_v1_chr12_+_129337985	2783693	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.999841	CTCF.p2:-22:1.000
chr7	117314049	117314195	reg1012327.p1	10.945	+	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	-194084	+	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	-246577	-	BC078170 AK056742 NM_003391 X07876	-350787	-	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	199359	-	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	199421	-	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	510049	+	M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	0.972129	CTCF.p2:-13:0.972
chr9	137978035	137978127	reg1008459.p1	10.945	+	TSC_hg19_v1_chr9_+_137967404 AK289921 CU679089 BT007146	-10590	+	BC008763 BC011741 TSC_hg19_v1_chr9_+_137967372 AK289719	-10708	+	D82343 BC000189 TSC_hg19_v1_chr9_+_137967290	-10803	+	AK290478 TSC_hg19_v1_chr9_+_137979513	1433	+	TSC_hg19_v1_chr9_+_138371663 AB014549 NM_014811	393569	+	AY927868 DQ892784 DQ896031 NM_001048265 NM_144654	413647	-	AK289921|OLFM1|10439|olfactomedin 1##BT007146|OLFM1|10439|olfactomedin 1##BC008763|OLFM1|10439|olfactomedin 1##BC011741|OLFM1|10439|olfactomedin 1##AK289719|OLFM1|10439|olfactomedin 1##D82343|OLFM1|10439|olfactomedin 1##BC000189|OLFM1|10439|olfactomedin 1##AK290478|OLFM1|10439|olfactomedin 1##AB014549|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##NM_014811|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##AY927868|C9orf116|138162|chromosome 9 open reading frame 116##DQ892784|C9orf116|138162|chromosome 9 open reading frame 116##DQ896031|C9orf116|138162|chromosome 9 open reading frame 116##NM_001048265|C9orf116|138162|chromosome 9 open reading frame 116##NM_144654|C9orf116|138162|chromosome 9 open reading frame 116	0.166231	
chr10	72685568	72685701	reg1009049.p2	10.944	+	NM_000281	-37094	-	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	-37332	-	TSC_hg19_v1_chr10_+_72575751 AB033078 AJ011304	-109879	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	286746	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	393391	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	393412	+	NM_000281|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AB033078|SGPL1|8879|sphingosine-1-phosphate lyase 1##AJ011304|SGPL1|8879|sphingosine-1-phosphate lyase 1##AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3	0.860828	CTCF.p2:-18:0.861
chr11	134009778	134009911	reg1010970.p1	10.944	+	AK075309 AK125071 AK225666 TSC_hg19_v1_chr11_+_133938965 BC057284 AJ344431 AF356518 BC012147 BC010690	-70872	+	AJ416101 NM_001205329 NM_032801 AY358335 TSC_hg19_v1_chr11_+_133938938 AK074769 AF448478	-70963	+	NM_014987 TSC_hg19_v1_chr11_-_133826886	-182962	-	TSC_hg19_v1_chr11_-_134093862 D29954	84002	-	TSC_hg19_v1_chr11_-_134093881 BC098398	84037	-	TSC_hg19_v1_chr11_-_134094442 AK124878 NM_015261	84598	-	AK075309|JAM3|83700|junctional adhesion molecule 3##AK125071|JAM3|83700|junctional adhesion molecule 3##AK225666|JAM3|83700|junctional adhesion molecule 3##BC057284|JAM3|83700|junctional adhesion molecule 3##AJ344431|JAM3|83700|junctional adhesion molecule 3##AF356518|JAM3|83700|junctional adhesion molecule 3##BC012147|JAM3|83700|junctional adhesion molecule 3##BC010690|JAM3|83700|junctional adhesion molecule 3##AJ416101|JAM3|83700|junctional adhesion molecule 3##NM_001205329|JAM3|83700|junctional adhesion molecule 3##NM_032801|JAM3|83700|junctional adhesion molecule 3##AY358335|JAM3|83700|junctional adhesion molecule 3##AK074769|JAM3|83700|junctional adhesion molecule 3##AF448478|JAM3|83700|junctional adhesion molecule 3##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B##D29954|NCAPD3|23310|non-SMC condensin II complex, subunit D3##BC098398|NCAPD3|23310|non-SMC condensin II complex, subunit D3##AK124878|NCAPD3|23310|non-SMC condensin II complex, subunit D3##NM_015261|NCAPD3|23310|non-SMC condensin II complex, subunit D3	0.983814	CTCF.p2:6:0.984
chr1	14898470	14898580	reg1008780.p1	10.944	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-822584	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-822602	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-822640	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	26669	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	352194	+	AY505121 NM_001018001	357770	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.099095	
chr14	90701822	90701931	reg1007281.p1	10.944	+	NM_022054 BC012779	-173769	+	TSC_hg19_v1_chr14_+_90422278 AK001952 BC015474 AK315549 BX161451	-279597	+	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	-279630	+	L02426 NM_002802 TSC_hg19_v1_chr14_+_90722920 AK313325 BC000512 BC016368 AK299121 BC067741 AK222668	21033	+	BC008925 BC033136 BC098568 TSC_hg19_v1_chr14_-_90798286 AK000870 AK294958 BC021805 NM_017970	96490	-	TSC_hg19_v1_chr14_+_90863329 NM_006888	161447	+	NM_022054|KCNK13|56659|potassium channel, subfamily K, member 13##BC012779|KCNK13|56659|potassium channel, subfamily K, member 13##AK001952|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC015474|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK315549|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BX161451|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##L02426|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##NM_002802|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##AK313325|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC000512|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC016368|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##AK299121|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC067741|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##AK222668|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC008925|C14orf102|55051|chromosome 14 open reading frame 102##BC033136|C14orf102|55051|chromosome 14 open reading frame 102##BC098568|C14orf102|55051|chromosome 14 open reading frame 102##AK000870|C14orf102|55051|chromosome 14 open reading frame 102##AK294958|C14orf102|55051|chromosome 14 open reading frame 102##BC021805|C14orf102|55051|chromosome 14 open reading frame 102##NM_017970|C14orf102|55051|chromosome 14 open reading frame 102##NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	0.999523	CTCF.p2:-2:1.000
chr18	29004486	29004615	reg1009081.p2	10.944	+	AY177664 NM_001134453 NM_177986 AY168788 AY228236 BC132907 BC132909 AY227350	-47744	+	AF097935 NM_001942 X56654 AB591022	-106393	+	Z34522 NM_004948 NM_024421 X72925	-261769	-	AK290367 NM_001944 M76482	23194	+	NM_001943 TSC_hg19_v1_chr18_+_29078205 BC099655 BC099656 BC099657 Z26317 AK308408	73593	+	NM_000371 TSC_hg19_v1_chr18_+_29171839 AK312051 BC005310 BC020791 D00096 GU727633 K02091 M10605 X59498 AF162690 BT007189 CR456908 DQ778081 DQ839490 U19780	167247	+	AY177664|DSG4|147409|desmoglein 4##NM_001134453|DSG4|147409|desmoglein 4##NM_177986|DSG4|147409|desmoglein 4##AY168788|DSG4|147409|desmoglein 4##AY228236|DSG4|147409|desmoglein 4##BC132907|DSG4|147409|desmoglein 4##BC132909|DSG4|147409|desmoglein 4##AY227350|DSG4|147409|desmoglein 4##AF097935|DSG1|1828|desmoglein 1##NM_001942|DSG1|1828|desmoglein 1##X56654|DSG1|1828|desmoglein 1##Z34522|DSC1|1823|desmocollin 1##NM_004948|DSC1|1823|desmocollin 1##NM_024421|DSC1|1823|desmocollin 1##X72925|DSC1|1823|desmocollin 1##AK290367|DSG3|1830|desmoglein 3##NM_001944|DSG3|1830|desmoglein 3##M76482|DSG3|1830|desmoglein 3##NM_001943|DSG2|1829|desmoglein 2##BC099655|DSG2|1829|desmoglein 2##BC099656|DSG2|1829|desmoglein 2##BC099657|DSG2|1829|desmoglein 2##Z26317|DSG2|1829|desmoglein 2##AK308408|DSG2|1829|desmoglein 2##NM_000371|TTR|7276|transthyretin##AK312051|TTR|7276|transthyretin##BC005310|TTR|7276|transthyretin##BC020791|TTR|7276|transthyretin##D00096|TTR|7276|transthyretin##GU727633|TTR|7276|transthyretin##K02091|TTR|7276|transthyretin##M10605|TTR|7276|transthyretin##X59498|TTR|7276|transthyretin##AF162690|TTR|7276|transthyretin##BT007189|TTR|7276|transthyretin##CR456908|TTR|7276|transthyretin##DQ839490|TTR|7276|transthyretin##U19780|TTR|7276|transthyretin	0.013697	
chr2	98357095	98357193	reg1006172.p1	10.941	+	AB083211 NM_207519	-6276	+	L05148 NM_001079 AK303341 AK310637 AK310628 BC053878	-27102	+	TSC_hg19_v1_chr2_-_98280591 NM_005735	-76570	-	AK025852 TSC_hg19_v1_chr2_-_98408976	51778	-	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	255042	-	TSC_hg19_v1_chr2_-_98612395 AK098792	255259	-	AB083211|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_207519|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##L05148|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_001079|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK303341|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310637|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310628|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##BC053878|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_005735|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##AK025852|TMEM131|23505|transmembrane protein 131##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##AK098792|TMEM131|23505|transmembrane protein 131	0.245634	
chr4	113554687	113554838	reg1008974.p1	10.941	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	-117430	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	-336235	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	-347761	-	TSC_hg19_v1_chr4_-_113558057 BC044799 BC028584 AK002193	3284	-	NM_016648	3357	+	TSC_hg19_v1_chr4_-_113558120 AK302613 AK299831 NM_018392	3373	-	BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC044799|C4orf21|55345|chromosome 4 open reading frame 21##BC028584|C4orf21|55345|chromosome 4 open reading frame 21##AK002193|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7##AK302613|C4orf21|55345|chromosome 4 open reading frame 21##AK299831|C4orf21|55345|chromosome 4 open reading frame 21##NM_018392|C4orf21|55345|chromosome 4 open reading frame 21	0.787289	CTCF.p2:0:0.787
chr6	99293790	99293894	reg1009431.p2	10.941	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	-11170	+	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	-11262	+	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	-1562752	-	TSC_hg19_v1_chr6_-_99395800 BC091484 BC032641	101947	-	TSC_hg19_v1_chr6_-_99395817 AK313076 BC055010 BC039819 NM_012160	101985	-	BC004869 BC011583 NM_032511	503688	-	Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##BC091484|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC032641|FBXL4|26235|F-box and leucine-rich repeat protein 4##AK313076|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC055010|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC039819|FBXL4|26235|F-box and leucine-rich repeat protein 4##NM_012160|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC004869|C6orf168|84553|chromosome 6 open reading frame 168##BC011583|C6orf168|84553|chromosome 6 open reading frame 168##NM_032511|C6orf168|84553|chromosome 6 open reading frame 168	0.02723	
chrX	23774377	23774513	reg1009008.p2	10.941	+	TSC_hg19_v1_chrX_-_23761415 NM_001033583 NM_001037171	-13035	-	BX648512 AK000659 TSC_hg19_v1_chrX_-_23761394	-13054	-	AB528567 TSC_hg19_v1_chrX_-_23761366 BC136671 BC144360 BC144370 BC012573	-13127	-	NM_002970 TSC_hg19_v1_chrX_+_23801289 AK310078 BC008424 AK312162 AK310094 M77693 AL050290 BC002503 AK315888	26867	+	TSC_hg19_v1_chrX_+_23801432 M55580 AY841998 AB464243 AM392717 BT006825 CR450294	27004	+	TSC_hg19_v1_chrX_-_23855464 AK303908 D28399	81015	-	NM_001033583|ACOT9|23597|acyl-CoA thioesterase 9##NM_001037171|ACOT9|23597|acyl-CoA thioesterase 9##BX648512|ACOT9|23597|acyl-CoA thioesterase 9##AK000659|ACOT9|23597|acyl-CoA thioesterase 9##BC136671|ACOT9|23597|acyl-CoA thioesterase 9##BC144360|ACOT9|23597|acyl-CoA thioesterase 9##BC144370|ACOT9|23597|acyl-CoA thioesterase 9##BC012573|ACOT9|23597|acyl-CoA thioesterase 9##NM_002970|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK310078|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BC008424|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK312162|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##M77693|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AL050290|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BC002503|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK315888|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##M55580|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AY841998|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BT006825|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##CR450294|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK303908|RPL9|6133|ribosomal protein L9	0.998024	CTCF.p2:-13:0.998
chr18	7221552	7221651	reg1008550.p2	10.940	+	BC144590 NM_005559 X58531	-103817	-	NM_001010000 BX648684 AK308259 AK302026	-387136	+	NM_001243517	-710187	+	NM_001105581	9535	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	345716	+	TSC_hg19_v1_chr18_+_7946885 AK294492	725305	+	BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M	0.379405	CTCF.p2:-5:0.379
chr12	64650079	64650190	reg1008712.p2	10.939	+	BC071634 AK057111 BC036246 AK129933 NM_152440	-34081	-	TSC_hg19_v1_chr12_+_64238511 BC053903 NM_020762 BC029919	-411588	+	TSC_hg19_v1_chr12_+_64237847 BC065032	-412408	+	BC039369 NM_001099676 NM_001170633	134183	-	TSC_hg19_v1_chr12_+_64798240 NM_007235 AK308108 AK292884	148112	+	BC020569 Y16414 TSC_hg19_v1_chr12_+_64803772 AF039022	153644	+	BC071634|C12orf66|144577|chromosome 12 open reading frame 66##AK057111|C12orf66|144577|chromosome 12 open reading frame 66##BC036246|C12orf66|144577|chromosome 12 open reading frame 66##AK129933|C12orf66|144577|chromosome 12 open reading frame 66##NM_152440|C12orf66|144577|chromosome 12 open reading frame 66##BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC039369|C12orf56|115749|chromosome 12 open reading frame 56##NM_001099676|C12orf56|115749|chromosome 12 open reading frame 56##NM_001170633|C12orf56|115749|chromosome 12 open reading frame 56##NM_007235|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK308108|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK292884|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	0.982024	CTCF.p2:7:0.982
chr5	66505142	66505251	reg1007308.p2	10.939	+	BC109069 BC109070 D83597 NM_005582 AK313177	-12596	-	AY830839 BC018692 NM_015183	-380593	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-612988	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	1006384	+	TSC_hg19_v1_chr5_+_67511602 BC094795	1006411	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	1079098	+	BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.975224	CTCF.p2:4:0.975
chr6	43691703	43691832	reg1009096.p1	10.939	+	TSC_hg19_v1_chr6_-_43655539 NM_001193343 NM_018135	-36219	-	TSC_hg19_v1_chr6_-_43655521 CU679679 DQ884400 AK300757 BC010364 AK307183 AB049952	-36248	-	NM_001193341 NM_152732 AK291399 BC029519 AK055407	-78971	+	TSC_hg19_v1_chr6_+_43737947 NM_001025366 NM_001025367 NM_001025368 NM_001025369 NM_001025370 NM_001033756 NM_001171622 NM_001171623 NM_001171624 NM_001171625 NM_001171626 NM_001171627 NM_001171628 NM_001171629 NM_001171630 NM_001204384 NM_001204385 NM_003376 BC058855 BC019867	46251	+	TSC_hg19_v1_chr6_+_43738284 AF022375	46480	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	46767	+	NM_001193343|MRPS18A|55168|mitochondrial ribosomal protein S18A##NM_018135|MRPS18A|55168|mitochondrial ribosomal protein S18A##DQ884400|MRPS18A|55168|mitochondrial ribosomal protein S18A##AK300757|MRPS18A|55168|mitochondrial ribosomal protein S18A##BC010364|MRPS18A|55168|mitochondrial ribosomal protein S18A##AK307183|MRPS18A|55168|mitochondrial ribosomal protein S18A##AB049952|MRPS18A|55168|mitochondrial ribosomal protein S18A##NM_001193341|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##NM_152732|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##AK291399|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##BC029519|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##AK055407|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##NM_001025366|VEGFA|7422|vascular endothelial growth factor A##NM_001025367|VEGFA|7422|vascular endothelial growth factor A##NM_001025368|VEGFA|7422|vascular endothelial growth factor A##NM_001025369|VEGFA|7422|vascular endothelial growth factor A##NM_001025370|VEGFA|7422|vascular endothelial growth factor A##NM_001033756|VEGFA|7422|vascular endothelial growth factor A##NM_001171622|VEGFA|7422|vascular endothelial growth factor A##NM_001171623|VEGFA|7422|vascular endothelial growth factor A##NM_001171624|VEGFA|7422|vascular endothelial growth factor A##NM_001171625|VEGFA|7422|vascular endothelial growth factor A##NM_001171626|VEGFA|7422|vascular endothelial growth factor A##NM_001171627|VEGFA|7422|vascular endothelial growth factor A##NM_001171628|VEGFA|7422|vascular endothelial growth factor A##NM_001171629|VEGFA|7422|vascular endothelial growth factor A##NM_001171630|VEGFA|7422|vascular endothelial growth factor A##NM_001204384|VEGFA|7422|vascular endothelial growth factor A##NM_001204385|VEGFA|7422|vascular endothelial growth factor A##NM_003376|VEGFA|7422|vascular endothelial growth factor A##BC058855|VEGFA|7422|vascular endothelial growth factor A##BC019867|VEGFA|7422|vascular endothelial growth factor A##AF022375|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A	0.954415	CTCF.p2:-20:0.954
chr7	106300555	106300657	reg1004144.p1	10.939	+	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	-375083	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	-375244	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	-547591	-	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	897	-	TSC_hg19_v1_chr7_+_106505701 AK292684	205107	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	205168	+	BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1##AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74##AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	0.589078	CTCF.p2:5:0.589
chr1	150895054	150895197	reg1010139.p1	10.938	+	TSC_hg19_v1_chr1_-_150849221 BC028362 AK293027 NM_001197325 NM_001668 NM_178427	-45894	-	TSC_hg19_v1_chr1_-_150849187 BC060838 AK290177 AL834279 AK313780	-45948	-	TSC_hg19_v1_chr1_-_150849073 AK315812 AK291705 AF001307 M69238 AK223459	-46039	-	NM_001145415 NM_001243491 NM_012432 TSC_hg19_v1_chr1_+_150898838 AK302461 AK308335 BC028671 D31891 BC009362	3744	+	TSC_hg19_v1_chr1_-_150947141 BC010032	52013	-	AK290989 TSC_hg19_v1_chr1_-_150947185 BC001357	52044	-	BC028362|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AK293027|ARNT|405|aryl hydrocarbon receptor nuclear translocator##NM_001197325|ARNT|405|aryl hydrocarbon receptor nuclear translocator##NM_001668|ARNT|405|aryl hydrocarbon receptor nuclear translocator##NM_178427|ARNT|405|aryl hydrocarbon receptor nuclear translocator##BC060838|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AK290177|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AL834279|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AK313780|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AK315812|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AK291705|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AF001307|ARNT|405|aryl hydrocarbon receptor nuclear translocator##M69238|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AK223459|ARNT|405|aryl hydrocarbon receptor nuclear translocator##NM_001145415|SETDB1|9869|SET domain, bifurcated 1##NM_001243491|SETDB1|9869|SET domain, bifurcated 1##NM_012432|SETDB1|9869|SET domain, bifurcated 1##AK302461|SETDB1|9869|SET domain, bifurcated 1##AK308335|SETDB1|9869|SET domain, bifurcated 1##BC028671|SETDB1|9869|SET domain, bifurcated 1##D31891|SETDB1|9869|SET domain, bifurcated 1##BC009362|SETDB1|9869|SET domain, bifurcated 1##BC010032|CERS2|29956|ceramide synthase 2##AK290989|CERS2|29956|ceramide synthase 2##BC001357|CERS2|29956|ceramide synthase 2	0.206359	CTCF.p2:7:0.206
chr20	20341166	20341280	reg1008879.p1	10.938	+	NM_001167816 AL117439	-303903	+	BC144222 AF255443 AF318303 AF318304 AF318305 NM_016652	-304536	-	AK307817 NM_015585 AK304174 BC028708	-308047	+	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	7531	+	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	352005	-	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	765441	+	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AK307817|C20orf26|26074|chromosome 20 open reading frame 26##NM_015585|C20orf26|26074|chromosome 20 open reading frame 26##AK304174|C20orf26|26074|chromosome 20 open reading frame 26##BC028708|C20orf26|26074|chromosome 20 open reading frame 26##M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1	0.937016	CTCF.p2:4:0.920
chr4	54063492	54063624	reg1009419.p2	10.938	+	TSC_hg19_v1_chr4_+_53728483 AK021492 AK027267 AK314942 AY839725 AY839726 BC001087 BC001846 NM_023940 BC025694	-335070	+	AK095318 NM_001242690 NM_024534	-445765	-	AY189288 TSC_hg19_v1_chr4_-_53617616	-445968	-	BC012458 CU689380 GQ129374 GQ129375 TSC_hg19_v1_chr4_-_54232229 BC021137 AB074276 AK096833 BC032453 AY299407 NM_152540	168577	-	TSC_hg19_v1_chr4_+_54243807 AK295737	180211	+	TSC_hg19_v1_chr4_+_54243821 NM_001134937 NM_001134938 NM_030917	180257	+	AK027267|RASL11B|65997|RAS-like, family 11, member B##AK314942|RASL11B|65997|RAS-like, family 11, member B##AY839725|RASL11B|65997|RAS-like, family 11, member B##AY839726|RASL11B|65997|RAS-like, family 11, member B##BC001087|RASL11B|65997|RAS-like, family 11, member B##BC001846|RASL11B|65997|RAS-like, family 11, member B##NM_023940|RASL11B|65997|RAS-like, family 11, member B##BC025694|RASL11B|65997|RAS-like, family 11, member B##NM_001242690|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##NM_024534|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##AY189288|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##BC012458|SCFD2|152579|sec1 family domain containing 2##GQ129374|SCFD2|152579|sec1 family domain containing 2##GQ129375|SCFD2|152579|sec1 family domain containing 2##BC021137|SCFD2|152579|sec1 family domain containing 2##AB074276|SCFD2|152579|sec1 family domain containing 2##AK096833|SCFD2|152579|sec1 family domain containing 2##BC032453|SCFD2|152579|sec1 family domain containing 2##AY299407|SCFD2|152579|sec1 family domain containing 2##NM_152540|SCFD2|152579|sec1 family domain containing 2##AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	0.984797	CTCF.p2:-14:0.985
chr1	152626622	152626754	reg1009464.p2	10.937	+	AB528786 BC120933 BC120934 NM_178431	-31110	-	NM_178433	-40402	+	BC130365 BC130367 NM_178434 HQ258028	-53516	+	NM_178430 BC130603 BC130605	9190	+	NM_178429 BC125197	21092	+	AF086289 NM_014357 AF005080 BC117235 BC117237	31914	+	AB528786|LCE3A|353142|late cornified envelope 3A##BC120933|LCE3A|353142|late cornified envelope 3A##BC120934|LCE3A|353142|late cornified envelope 3A##NM_178431|LCE3A|353142|late cornified envelope 3A##NM_178433|LCE3B|353143|late cornified envelope 3B##BC130365|LCE3C|353144|late cornified envelope 3C##BC130367|LCE3C|353144|late cornified envelope 3C##NM_178434|LCE3C|353144|late cornified envelope 3C##HQ258028|LCE3C|353144|late cornified envelope 3C##NM_178430|LCE2D|353141|late cornified envelope 2D##BC130603|LCE2D|353141|late cornified envelope 2D##BC130605|LCE2D|353141|late cornified envelope 2D##NM_178429|LCE2C|353140|late cornified envelope 2C##AF086289|LCE2B|26239|late cornified envelope 2B##NM_014357|LCE2B|26239|late cornified envelope 2B##AF005080|LCE2B|26239|late cornified envelope 2B##BC117235|LCE2B|26239|late cornified envelope 2B##BC117237|LCE2B|26239|late cornified envelope 2B	0.987948	CTCF.p2:-5:0.988
chr1	22602463	22602578	reg1010773.p1	10.937	+	AY009398 BT020125 AB590593 AB061675 AY358947 AF316543 NM_030761 BC057781	-133009	-	TSC_hg19_v1_chr1_+_22379812 AL121737	-222715	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	-223350	+	AK091019 AK095273 AX746732 NM_001083621 NM_014870 TSC_hg19_v1_chr1_+_22778343	175824	+	TSC_hg19_v1_chr1_+_22778350 AB007947 BC114607	175906	+	TSC_hg19_v1_chr1_+_22889990 BC072417 NM_001006943 NM_020526 BC038796 AB527136	287536	+	AY009398|WNT4|54361|wingless-type MMTV integration site family, member 4##BT020125|WNT4|54361|wingless-type MMTV integration site family, member 4##AB061675|WNT4|54361|wingless-type MMTV integration site family, member 4##AY358947|WNT4|54361|wingless-type MMTV integration site family, member 4##AF316543|WNT4|54361|wingless-type MMTV integration site family, member 4##NM_030761|WNT4|54361|wingless-type MMTV integration site family, member 4##BC057781|WNT4|54361|wingless-type MMTV integration site family, member 4##AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40##AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40##AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40##BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40##BC072417|EPHA8|2046|EPH receptor A8##NM_001006943|EPHA8|2046|EPH receptor A8##NM_020526|EPHA8|2046|EPH receptor A8##BC038796|EPHA8|2046|EPH receptor A8	0.0	
chr8	126444395	126444496	reg1006591.p2	10.937	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-1866	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-340348	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-340388	-	TSC_hg19_v1_chr8_-_126963395 BX648371	518968	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	1126110	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	1126279	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.970938	CTCF.p2:6:0.971
chr9	117249993	117250129	reg1011278.p1	10.937	+	AY703039 AK126136 TSC_hg19_v1_chr9_-_117160753	-89310	-	AY703040 BC055285 NM_030767	-93377	-	AY703041 AY703042 AK131082 AK160382 TSC_hg19_v1_chr9_-_117150263 AB075848	-99771	-	AL110228 NM_001083885	15412	-	BC142684 TSC_hg19_v1_chr9_-_117267731 AK056190 BC142614 NM_001173425 NM_015404	17669	-	NM_004888 TSC_hg19_v1_chr9_+_117350048 BC003564 AF038954 BC008452	99977	+	AY703039|AKNA|80709|AT-hook transcription factor##AK126136|AKNA|80709|AT-hook transcription factor##AY703040|AKNA|80709|AT-hook transcription factor##BC055285|AKNA|80709|AT-hook transcription factor##NM_030767|AKNA|80709|AT-hook transcription factor##AY703041|AKNA|80709|AT-hook transcription factor##AY703042|AKNA|80709|AT-hook transcription factor##AK131082|AKNA|80709|AT-hook transcription factor##AK160382|AKNA|80709|AT-hook transcription factor##AB075848|AKNA|80709|AT-hook transcription factor##AL110228|DFNB31|25861|deafness, autosomal recessive 31##NM_001083885|DFNB31|25861|deafness, autosomal recessive 31##BC142684|DFNB31|25861|deafness, autosomal recessive 31##AK056190|DFNB31|25861|deafness, autosomal recessive 31##BC142614|DFNB31|25861|deafness, autosomal recessive 31##NM_001173425|DFNB31|25861|deafness, autosomal recessive 31##NM_015404|DFNB31|25861|deafness, autosomal recessive 31##NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	0.979577	CTCF.p2:-7:0.962
chrX	20009311	20009457	reg1008427.p1	10.937	+	AY092822 TSC_hg19_v1_chrX_-_20009180	-276	-	NM_198279	-21003	-	TSC_hg19_v1_chrX_-_19905675 AK313308 AF230904 AY423734 NM_031892	-103680	-	AK294788 NM_001168467	125368	-	AK027409 TSC_hg19_v1_chrX_-_20135017 AK303019 AK316117 AK296319 BC136379 BC089400 NM_001168465 NM_001168466 NM_152780	125680	-	BT007064 EU831819 EU831896 TSC_hg19_v1_chrX_-_20159957 BC000793 BC110421 AK312320 BC067851 L18960 NM_001412	150492	-	AY092822|LOC729609|729609|uncharacterized LOC729609##NM_198279|CXorf23|256643|chromosome X open reading frame 23##AK313308|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF230904|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY423734|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_031892|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK294788|MAP7D2|256714|MAP7 domain containing 2##NM_001168467|MAP7D2|256714|MAP7 domain containing 2##AK027409|MAP7D2|256714|MAP7 domain containing 2##AK303019|MAP7D2|256714|MAP7 domain containing 2##AK316117|MAP7D2|256714|MAP7 domain containing 2##AK296319|MAP7D2|256714|MAP7 domain containing 2##BC136379|MAP7D2|256714|MAP7 domain containing 2##BC089400|MAP7D2|256714|MAP7 domain containing 2##NM_001168465|MAP7D2|256714|MAP7 domain containing 2##NM_001168466|MAP7D2|256714|MAP7 domain containing 2##NM_152780|MAP7D2|256714|MAP7 domain containing 2##BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	1.089457	CTCF.p2:-49:0.991
chr10	102801089	102801201	reg1010046.p1	10.936	+	TSC_hg19_v1_chr10_+_102792167 AK299405 BC000124	-8956	+	AK074707 TSC_hg19_v1_chr10_+_102792161	-8984	+	TSC_hg19_v1_chr10_+_102790985 NM_030971	-10156	+	TSC_hg19_v1_chr10_+_102820998 AK172864 NM_030929	19833	+	TSC_hg19_v1_chr10_+_102821745 BC007758 AY359087 AK225949 AK172862	20514	+	BC019674 NM_001085398	89757	-	AK299405|SFXN3|81855|sideroflexin 3##BC000124|SFXN3|81855|sideroflexin 3##AK074707|SFXN3|81855|sideroflexin 3##NM_030971|SFXN3|81855|sideroflexin 3##AK172864|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##NM_030929|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##BC007758|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AY359087|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK225949|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172862|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor	0.864767	CTCF.p2:-3:0.865
chr16	2053945	2054066	reg1008937.p2	10.936	+	NM_004209 TSC_hg19_v1_chr16_+_2039990 AK313894 BC009568 BC014087 AJ002309 DQ892351 DQ895555 CU680772	-13982	+	TSC_hg19_v1_chr16_+_2034205 AB528688 AF306863 BC002429 BC028348 AF124604 U31176	-19755	+	TSC_hg19_v1_chr16_+_2034139 NM_005262	-19915	+	TSC_hg19_v1_chr16_-_2059761 BC050477 NM_178167	5762	-	AK024487 TSC_hg19_v1_chr16_-_2059805	5815	-	NM_001099456 AL365521	15527	+	NM_004209|SYNGR3|9143|synaptogyrin 3##AK313894|SYNGR3|9143|synaptogyrin 3##BC009568|SYNGR3|9143|synaptogyrin 3##BC014087|SYNGR3|9143|synaptogyrin 3##AJ002309|SYNGR3|9143|synaptogyrin 3##DQ892351|SYNGR3|9143|synaptogyrin 3##DQ895555|SYNGR3|9143|synaptogyrin 3##AF306863|GFER|2671|growth factor, augmenter of liver regeneration##BC002429|GFER|2671|growth factor, augmenter of liver regeneration##BC028348|GFER|2671|growth factor, augmenter of liver regeneration##AF124604|GFER|2671|growth factor, augmenter of liver regeneration##U31176|GFER|2671|growth factor, augmenter of liver regeneration##NM_005262|GFER|2671|growth factor, augmenter of liver regeneration##BC050477|ZNF598|90850|zinc finger protein 598##NM_178167|ZNF598|90850|zinc finger protein 598##AK024487|ZNF598|90850|zinc finger protein 598##NM_001099456|NPW|283869|neuropeptide W##AL365521|NPW|283869|neuropeptide W	1.025123	CTCF.p2:-24:1.000
chr12	86266412	86266544	reg1010469.p1	10.935	+	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	-36241	-	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	-36433	-	U31986 TSC_hg19_v1_chr12_+_85673999 BC010923 NM_006982	-592519	+	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	1648	+	BC035851 NM_013244	966179	-	AL833338 BC062424 AK093140 AX747948 NM_152589	2156682	-	AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##U31986|ALX1|8092|ALX homeobox 1##BC010923|ALX1|8092|ALX homeobox 1##NM_006982|ALX1|8092|ALX homeobox 1##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin##BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##AL833338|C12orf50|160419|chromosome 12 open reading frame 50##BC062424|C12orf50|160419|chromosome 12 open reading frame 50##AK093140|C12orf50|160419|chromosome 12 open reading frame 50##NM_152589|C12orf50|160419|chromosome 12 open reading frame 50	0.121448	
chr1	34579656	34579764	reg1007332.p2	10.934	+	AK097707 NM_145205	-253635	+	NM_145238 AK131405 TSC_hg19_v1_chr1_+_33938251 AK290195 BC008827 BC011404	-641459	+	TSC_hg19_v1_chr1_-_33896604 AJ242730	-683102	-	TSC_hg19_v1_chr1_-_34630856 AB212622	51155	-	AY210418 NM_052896	51732	-	AK123355 NM_032884 BC007637	52889	+	AK097707|HMGB4|127540|high mobility group box 4##NM_145205|HMGB4|127540|high mobility group box 4##NM_145238|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK131405|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK290195|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC008827|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC011404|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AJ242730|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AB212622|CSMD2|114784|CUB and Sushi multiple domains 2##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2##AK123355|C1orf94|84970|chromosome 1 open reading frame 94##NM_032884|C1orf94|84970|chromosome 1 open reading frame 94##BC007637|C1orf94|84970|chromosome 1 open reading frame 94	0.829133	CTCF.p2:3:0.829
chr6	56769485	56769613	reg1009211.p1	10.934	+	AK299898 TSC_hg19_v1_chr6_-_56716715	-52835	-	AK294830 TSC_hg19_v1_chr6_-_56716493	-53097	-	TSC_hg19_v1_chr6_-_56708446 U31850	-61077	-	TSC_hg19_v1_chr6_+_56819725 NM_152731	50190	+	BC036119 TSC_hg19_v1_chr6_+_56819931 AK054724	50457	+	TSC_hg19_v1_chr6_+_56911328 BC041125 NM_020931	141797	+	AK299898|DST|667|dystonin##AK294830|DST|667|dystonin##U31850|DST|667|dystonin##NM_152731|BEND6|221336|BEN domain containing 6##BC036119|BEND6|221336|BEN domain containing 6##AK054724|BEND6|221336|BEN domain containing 6##BC041125|KIAA1586|57691|KIAA1586##NM_020931|KIAA1586|57691|KIAA1586	0.552631	CTCF.p2:6:0.553
chr2	25923138	25923272	reg1009062.p1	10.933	+	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	-26804	-	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	-357743	-	TSC_hg19_v1_chr2_-_25565353 AB208833	-357842	-	AB385496 TSC_hg19_v1_chr2_-_26101159	177924	-	TSC_hg19_v1_chr2_-_26101174 AB084279	177968	-	TSC_hg19_v1_chr2_-_26101321 AB051472 NM_018263	178109	-	AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta##BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)##AB051472|ASXL2|55252|additional sex combs like 2 (Drosophila)##NM_018263|ASXL2|55252|additional sex combs like 2 (Drosophila)	0.479525	CTCF.p2:-6:0.480
chr1	159906324	159906432	reg1007006.p1	10.932	+	TSC_hg19_v1_chr1_-_159895294 BC002616 D21261 GU727636 NM_003564 AK291562 AK298654	-11091	-	BC009357 TSC_hg19_v1_chr1_-_159895269	-11113	-	BC089391 BC027874 NM_012337 BC064386 AF094758 AK308262 AK225566 AK225582 AK292249	-36453	-	TSC_hg19_v1_chr1_-_159915401 AB037776 BC030141 NM_001135050 NM_020789 AY358128	9016	-	BC074754 BC070213 AY358801 AF275725 AY034613 NM_001146172 NM_001146173 NM_033438	17624	-	CU676470 TSC_hg19_v1_chr1_-_160001654 BC001803	95218	-	BC002616|TAGLN2|8407|transgelin 2##D21261|TAGLN2|8407|transgelin 2##GU727636|TAGLN2|8407|transgelin 2##NM_003564|TAGLN2|8407|transgelin 2##AK291562|TAGLN2|8407|transgelin 2##AK298654|TAGLN2|8407|transgelin 2##BC009357|TAGLN2|8407|transgelin 2##BC089391|CCDC19|25790|coiled-coil domain containing 19##BC027874|CCDC19|25790|coiled-coil domain containing 19##NM_012337|CCDC19|25790|coiled-coil domain containing 19##BC064386|CCDC19|25790|coiled-coil domain containing 19##AF094758|CCDC19|25790|coiled-coil domain containing 19##AK308262|CCDC19|25790|coiled-coil domain containing 19##AK225566|CCDC19|25790|coiled-coil domain containing 19##AK225582|CCDC19|25790|coiled-coil domain containing 19##AK292249|CCDC19|25790|coiled-coil domain containing 19##AB037776|IGSF9|57549|immunoglobulin superfamily, member 9##BC030141|IGSF9|57549|immunoglobulin superfamily, member 9##NM_001135050|IGSF9|57549|immunoglobulin superfamily, member 9##NM_020789|IGSF9|57549|immunoglobulin superfamily, member 9##AY358128|IGSF9|57549|immunoglobulin superfamily, member 9##BC074754|SLAMF9|89886|SLAM family member 9##BC070213|SLAMF9|89886|SLAM family member 9##AY358801|SLAMF9|89886|SLAM family member 9##AF275725|SLAMF9|89886|SLAM family member 9##AY034613|SLAMF9|89886|SLAM family member 9##NM_001146172|SLAMF9|89886|SLAM family member 9##NM_001146173|SLAMF9|89886|SLAM family member 9##NM_033438|SLAMF9|89886|SLAM family member 9##BC001803|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M	0.998998	CTCF.p2:4:0.999
chr7	104621791	104621947	reg1008911.p2	10.932	+	TSC_hg19_v1_chr7_-_104567089 BC050337	-54779	-	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-652651	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-773438	-	TSC_hg19_v1_chr7_-_104653491 AK124046	31613	-	TSC_hg19_v1_chr7_-_104654062 AK094372	32205	-	TSC_hg19_v1_chr7_-_104654534 BC017007 AK123476	32633	-	BC050337|LOC723809|723809|uncharacterized LOC723809##AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545##BC017007|LOC100216545|100216545|uncharacterized LOC100216545##AK123476|LOC100216545|100216545|uncharacterized LOC100216545	0.520839	CTCF.p2:-15:0.521
chr9	15104970	15105068	reg1008326.p1	10.932	+	BX537574 NM_144966	-194027	-	AB160987 TSC_hg19_v1_chr9_-_14869016	-236020	-	BC031064 NM_001177704	-325489	-	AK301427 NM_001168342	145136	-	TSC_hg19_v1_chr9_-_15307215 BC070139 AK301185 AK298581 AK091187 AX746836	202181	-	TSC_hg19_v1_chr9_-_15307325 AK298998 BC142985 AK310482 NM_001168339 NM_001168340 NM_001168341 NM_152574	202325	-	BX537574|FREM1|158326|FRAS1 related extracellular matrix 1##NM_144966|FREM1|158326|FRAS1 related extracellular matrix 1##AB160987|FREM1|158326|FRAS1 related extracellular matrix 1##BC031064|FREM1|158326|FRAS1 related extracellular matrix 1##NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1##AK301427|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168342|TTC39B|158219|tetratricopeptide repeat domain 39B##BC070139|TTC39B|158219|tetratricopeptide repeat domain 39B##AK301185|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298581|TTC39B|158219|tetratricopeptide repeat domain 39B##AK091187|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298998|TTC39B|158219|tetratricopeptide repeat domain 39B##BC142985|TTC39B|158219|tetratricopeptide repeat domain 39B##AK310482|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168339|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168340|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168341|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_152574|TTC39B|158219|tetratricopeptide repeat domain 39B	0.0	
chr13	20013365	20013460	reg1008548.p2	10.931	+	BC011721 NM_006001	-257450	-	None	None	None	None	None	None	BC128146 BC128147 AJ421032 AY219890 NM_001141968 NM_130785 NM_199254	97481	-	TSC_hg19_v1_chr13_+_20207808 AK300258 NM_017520 BC017322 AK092556 AX747597 AL832864 BC003542	194423	+	TSC_hg19_v1_chr13_-_20346399 AL834505	333028	-	BC011721|TUBA3C|7278|tubulin, alpha 3c##NM_006001|TUBA3C|7278|tubulin, alpha 3c##BC128146|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##BC128147|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AJ421032|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AY219890|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_001141968|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_130785|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_199254|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AK300258|MPHOSPH8|54737|M-phase phosphoprotein 8##NM_017520|MPHOSPH8|54737|M-phase phosphoprotein 8##BC017322|MPHOSPH8|54737|M-phase phosphoprotein 8##AK092556|MPHOSPH8|54737|M-phase phosphoprotein 8##AL832864|MPHOSPH8|54737|M-phase phosphoprotein 8##BC003542|MPHOSPH8|54737|M-phase phosphoprotein 8##AL834505|PSPC1|55269|paraspeckle component 1	0.997937	CTCF.p2:8:0.998
chr3	186567307	186567441	reg1009587.p1	10.931	+	BC096308 BC096309 BC096310 BC096311 TSC_hg19_v1_chr3_+_186560498 AK291525 AK312868 AX767959 D45371 BC054496	-6875	+	NM_001177800 NM_004797 TSC_hg19_v1_chr3_+_186560467 AL832470	-6908	+	NM_181573	-42891	-	TSC_hg19_v1_chr3_+_186648314 NM_173216 NM_173217	80935	+	X17247 TSC_hg19_v1_chr3_+_186648632	81203	+	U67847 TSC_hg19_v1_chr3_+_186714361	146974	+	BC096308|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096309|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096310|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096311|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AK291525|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AK312868|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AX767959|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##D45371|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC054496|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##NM_001177800|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##NM_004797|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AL832470|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##NM_181573|RFC4|5984|replication factor C (activator 1) 4, 37kDa##NM_173216|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_173217|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	0.428061	CTCF.p2:-32:0.428
chr17	37363351	37363483	reg1011490.p1	10.930	+	TSC_hg19_v1_chr17_+_37356579 BC000530 S56985 BC013016	-6836	+	TSC_hg19_v1_chr17_+_37356573 AK223082 BC062709 BX537435	-6845	+	BC095445 NM_000981 TSC_hg19_v1_chr17_+_37356569 AB055766 BC066315 AK130962 AK311858 X63527	-6865	+	BC109231 AJ608762 AK131500 NM_198993	18562	-	TSC_hg19_v1_chr17_-_37557855 BC007557 DQ223959 AK312612 AK291844 AK123048 NM_001184906 NM_032875	194483	-	CU687400 BC131783 AF055994 BC006517 Y13467 BC060758 TSC_hg19_v1_chr17_-_37607519 AK299789 AK314185 NM_004774	244004	-	BC000530|RPL19|6143|ribosomal protein L19##S56985|RPL19|6143|ribosomal protein L19##BC013016|RPL19|6143|ribosomal protein L19##AK223082|RPL19|6143|ribosomal protein L19##BC062709|RPL19|6143|ribosomal protein L19##BX537435|RPL19|6143|ribosomal protein L19##BC095445|RPL19|6143|ribosomal protein L19##NM_000981|RPL19|6143|ribosomal protein L19##AB055766|RPL19|6143|ribosomal protein L19##BC066315|RPL19|6143|ribosomal protein L19##AK130962|RPL19|6143|ribosomal protein L19##AK311858|RPL19|6143|ribosomal protein L19##X63527|RPL19|6143|ribosomal protein L19##BC109231|STAC2|342667|SH3 and cysteine rich domain 2##AJ608762|STAC2|342667|SH3 and cysteine rich domain 2##AK131500|STAC2|342667|SH3 and cysteine rich domain 2##NM_198993|STAC2|342667|SH3 and cysteine rich domain 2##BC007557|FBXL20|84961|F-box and leucine-rich repeat protein 20##DQ223959|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK312612|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK291844|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK123048|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_001184906|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_032875|FBXL20|84961|F-box and leucine-rich repeat protein 20##BC131783|MED1|5469|mediator complex subunit 1##AF055994|MED1|5469|mediator complex subunit 1##BC006517|MED1|5469|mediator complex subunit 1##Y13467|MED1|5469|mediator complex subunit 1##BC060758|MED1|5469|mediator complex subunit 1##AK299789|MED1|5469|mediator complex subunit 1##AK314185|MED1|5469|mediator complex subunit 1##NM_004774|MED1|5469|mediator complex subunit 1	0.964483	CTCF.p2:-18:0.964
chr11	63506349	63506484	reg1011031.p1	10.929	+	TSC_hg19_v1_chr11_+_63448971 NM_006054 NM_201428 NM_201429 NM_201430 AY427821 AY750848 AK309766 AK075412 AK297533 AK304100 AK307811 BC011394 AK295534 AK308083 BC022993 AB209771 AF059524 AK222898 AF119297 BC100822 BC100823 BC118550 BC118628 AK295758 BC010556 BC105982 BC000634 AK295361 BC105981 AK297529 AB591013 CU679745 AK127079	-57370	+	TSC_hg19_v1_chr11_-_63439066 NM_015459 CR936784 BC077727	-67346	-	TSC_hg19_v1_chr11_-_63438892 AK023383 CU687312 AL117600 BC005096	-67563	-	NM_001144936 TSC_hg19_v1_chr11_-_63536248	29780	-	BC056402 NM_138471 TSC_hg19_v1_chr11_+_63580927	74529	+	TSC_hg19_v1_chr11_+_63581031 BC002782 BC007540 CU691150	74678	+	NM_006054|RTN3|10313|reticulon 3##NM_201428|RTN3|10313|reticulon 3##NM_201429|RTN3|10313|reticulon 3##NM_201430|RTN3|10313|reticulon 3##AY427821|RTN3|10313|reticulon 3##AY750848|RTN3|10313|reticulon 3##AK309766|RTN3|10313|reticulon 3##AK075412|RTN3|10313|reticulon 3##AK297533|RTN3|10313|reticulon 3##AK304100|RTN3|10313|reticulon 3##AK307811|RTN3|10313|reticulon 3##BC011394|RTN3|10313|reticulon 3##AK295534|RTN3|10313|reticulon 3##AK308083|RTN3|10313|reticulon 3##BC022993|RTN3|10313|reticulon 3##AB209771|RTN3|10313|reticulon 3##AF059524|RTN3|10313|reticulon 3##AK222898|RTN3|10313|reticulon 3##AF119297|RTN3|10313|reticulon 3##BC100822|RTN3|10313|reticulon 3##BC100823|RTN3|10313|reticulon 3##BC118550|RTN3|10313|reticulon 3##BC118628|RTN3|10313|reticulon 3##AK295758|RTN3|10313|reticulon 3##BC010556|RTN3|10313|reticulon 3##BC105982|RTN3|10313|reticulon 3##BC000634|RTN3|10313|reticulon 3##AK295361|RTN3|10313|reticulon 3##BC105981|RTN3|10313|reticulon 3##AK297529|RTN3|10313|reticulon 3##AK127079|RTN3|10313|reticulon 3##NM_015459|ATL3|25923|atlastin GTPase 3##CR936784|ATL3|25923|atlastin GTPase 3##BC077727|ATL3|25923|atlastin GTPase 3##AK023383|ATL3|25923|atlastin GTPase 3##AL117600|ATL3|25923|atlastin GTPase 3##NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95##BC056402|C11orf84|144097|chromosome 11 open reading frame 84##NM_138471|C11orf84|144097|chromosome 11 open reading frame 84##BC002782|C11orf84|144097|chromosome 11 open reading frame 84##BC007540|C11orf84|144097|chromosome 11 open reading frame 84	0.951307	CTCF.p2:2:0.951
chr17	74677439	74677576	reg1011439.p1	10.928	+	AY096001 CU692632 BC022462 TSC_hg19_v1_chr17_-_74639807 AK310906 AY358918 BC063830 NM_018414	-37701	-	NM_006456 TSC_hg19_v1_chr17_-_74582222	-95320	-	TSC_hg19_v1_chr17_-_74581934 AK225943	-95566	-	TSC_hg19_v1_chr17_-_74707048 AB590448 NM_001008528 NM_001008529 NM_198530 BC094776	29525	-	TSC_hg19_v1_chr17_-_74707067 BC053983	29593	-	BC016837 TSC_hg19_v1_chr17_-_74722026	44485	-	AY096001|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##BC022462|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##AK310906|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##AY358918|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##BC063830|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##NM_018414|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##NM_006456|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##AK225943|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##NM_001008528|MXRA7|439921|matrix-remodelling associated 7##NM_001008529|MXRA7|439921|matrix-remodelling associated 7##NM_198530|MXRA7|439921|matrix-remodelling associated 7##BC094776|MXRA7|439921|matrix-remodelling associated 7##BC053983|MXRA7|439921|matrix-remodelling associated 7##BC016837|JMJD6|23210|jumonji domain containing 6	0.798782	CTCF.p2:-7:0.799
chr6	143658858	143658988	reg1011073.p1	10.928	+	TSC_hg19_v1_chr6_+_143382055 BC025278 CU692954 DQ893291 DQ896622 BX538067	-276841	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	-276887	+	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	-276928	+	TSC_hg19_v1_chr6_-_143771811 BC037955 NM_182503	112906	-	TSC_hg19_v1_chr6_+_143771941 NM_003630 BC014551 BC015506 AB035307 AK025644 AK300907 AJ001625 AJ131389 AY277600 CR542062 CU677325	113077	+	CU678350 AK296485 BC003060 AK075458 TSC_hg19_v1_chr6_-_143832841 AY358551 BC051268 AK315475 NM_032020	173971	-	BC025278|AIG1|51390|androgen-induced 1##DQ893291|AIG1|51390|androgen-induced 1##DQ896622|AIG1|51390|androgen-induced 1##BX538067|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC037955|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_182503|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_003630|PEX3|8504|peroxisomal biogenesis factor 3##BC014551|PEX3|8504|peroxisomal biogenesis factor 3##BC015506|PEX3|8504|peroxisomal biogenesis factor 3##AB035307|PEX3|8504|peroxisomal biogenesis factor 3##AK025644|PEX3|8504|peroxisomal biogenesis factor 3##AK300907|PEX3|8504|peroxisomal biogenesis factor 3##AJ001625|PEX3|8504|peroxisomal biogenesis factor 3##AJ131389|PEX3|8504|peroxisomal biogenesis factor 3##AY277600|PEX3|8504|peroxisomal biogenesis factor 3##CR542062|PEX3|8504|peroxisomal biogenesis factor 3##AK296485|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC003060|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK075458|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AY358551|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC051268|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK315475|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_032020|FUCA2|2519|fucosidase, alpha-L- 2, plasma	0.998055	CTCF.p2:-9:0.998
chr9	32572386	32572517	reg1008758.p1	10.928	+	TSC_hg19_v1_chr9_-_32552585 NM_001195622 NM_005802	-19849	-	AB045732 AB045733 AF098300 TSC_hg19_v1_chr9_-_32552567 BC060884	-19892	-	U82939 TSC_hg19_v1_chr9_-_32550876	-21588	-	CR456920 TSC_hg19_v1_chr9_-_32573139 AF035840 BC029247 AK289702 AF067167 BC009801 NM_001199987 NM_002493 NM_182739	671	-	BC116181 BC116182 AF390562 NM_153809	63189	-	AK125320 NM_212558 BX647550	211065	+	NM_001195622|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##NM_005802|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AB045732|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AB045733|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AF098300|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##BC060884|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##U82939|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##CR456920|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AF035840|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC029247|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AK289702|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AF067167|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC009801|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_001199987|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_002493|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_182739|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC116181|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##BC116182|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##AF390562|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##NM_153809|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##AK125320|TMEM215|401498|transmembrane protein 215##NM_212558|TMEM215|401498|transmembrane protein 215##BX647550|TMEM215|401498|transmembrane protein 215	0.997681	CTCF.p2:11:0.998
chr12	56895144	56895259	reg1010432.p1	10.927	+	AK289471 BC025661 BC036929 AK000467 AF110330 AK303772 AF223944 AK294822 BC119767 BC119768 BC059370 BC048344 NM_013267	-13161	-	NM_207344 TSC_hg19_v1_chr12_+_56862350 AF451989 AK300594 AL832247 BC020844 AK291920 BX647957 AK074733 AF289571	-32849	+	HQ258134 BC074913 BC117474 NM_012064	-46785	-	TSC_hg19_v1_chr12_+_56915603 NM_002898 BC072679 AK308885 AK293315 AK304540 D28483 AK299580 BC027863 CU693300	20496	+	AF000422 TSC_hg19_v1_chr12_-_57006969	111715	-	AK023830 TSC_hg19_v1_chr12_-_57009380	114175	-	AK289471|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC025661|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC036929|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK000467|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF110330|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK303772|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF223944|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK294822|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119767|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119768|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC059370|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC048344|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_013267|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_207344|SPRYD4|283377|SPRY domain containing 4##AF451989|SPRYD4|283377|SPRY domain containing 4##AK300594|SPRYD4|283377|SPRY domain containing 4##AL832247|SPRYD4|283377|SPRY domain containing 4##BC020844|SPRYD4|283377|SPRY domain containing 4##AK291920|SPRYD4|283377|SPRY domain containing 4##BX647957|SPRYD4|283377|SPRY domain containing 4##AK074733|SPRYD4|283377|SPRY domain containing 4##AF289571|SPRYD4|283377|SPRY domain containing 4##HQ258134|MIP|4284|major intrinsic protein of lens fiber##BC074913|MIP|4284|major intrinsic protein of lens fiber##BC117474|MIP|4284|major intrinsic protein of lens fiber##NM_012064|MIP|4284|major intrinsic protein of lens fiber##NM_002898|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC072679|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK308885|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK293315|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK304540|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##D28483|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK299580|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC027863|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AF000422|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023830|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A	0.830069	CTCF.p2:8:0.830
chr12	9043286	9043420	reg1007935.p1	10.927	+	NM_144670 AK122624 AK290355 AL832139 BX648231	-68171	+	TSC_hg19_v1_chr12_+_8850570 AK302847 NM_020734 BC006368	-192749	+	AK124368 TSC_hg19_v1_chr12_-_8815486	-227871	-	TSC_hg19_v1_chr12_+_9067153 AB209063 AK293893 NM_004426 BC073964 U89277 BC157850	23916	+	TSC_hg19_v1_chr12_-_9102242 AK291143 M16985 AK222792 BC024206 AK312689	58865	-	TSC_hg19_v1_chr12_-_9102262 NM_001207024 NM_002355	58956	-	NM_144670|A2ML1|144568|alpha-2-macroglobulin-like 1##AK122624|A2ML1|144568|alpha-2-macroglobulin-like 1##AK290355|A2ML1|144568|alpha-2-macroglobulin-like 1##AL832139|A2ML1|144568|alpha-2-macroglobulin-like 1##BX648231|A2ML1|144568|alpha-2-macroglobulin-like 1##AK302847|RIMKLB|57494|ribosomal modification protein rimK-like family member B##NM_020734|RIMKLB|57494|ribosomal modification protein rimK-like family member B##BC006368|RIMKLB|57494|ribosomal modification protein rimK-like family member B##AK124368|MFAP5|8076|microfibrillar associated protein 5##AB209063|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##AK293893|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##NM_004426|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC073964|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##U89277|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC157850|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##AK291143|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##M16985|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK222792|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##BC024206|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK312689|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##NM_001207024|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##NM_002355|M6PR|4074|mannose-6-phosphate receptor (cation dependent)	0.98208	CTCF.p2:-9:0.982
chr20	36701991	36702137	reg1008995.p2	10.927	+	TSC_hg19_v1_chr20_+_36662228 AB463518 CU689672	-39787	+	TSC_hg19_v1_chr20_+_36662168 BC033629 AK312468 BC001696	-39897	+	TSC_hg19_v1_chr20_+_36661917 NM_021215 DQ372938	-40103	+	TSC_hg19_v1_chr20_-_36758362 M98479	56327	-	TSC_hg19_v1_chr20_-_36793673 AK291714 AK058031 AK295775 AK300292 AK314618 BC003551 NM_004613 NM_198951	91615	-	AK096202 NM_001029864	187109	-	BC033629|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##AK312468|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##BC001696|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##NM_021215|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##DQ372938|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##M98479|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291714|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK058031|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK295775|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK300292|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK314618|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC003551|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_004613|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_198951|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755	0.045552	
chr3	22605753	22605856	reg1008492.p1	10.926	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-191670	-	AK026072 NM_024697	-812989	-	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-2378130	-	TSC_hg19_v1_chr3_+_23244600 AK307075	638779	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	638951	+	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	1241606	+	AK310298|ZNF385D|79750|zinc finger protein 385D##AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.015276	
chr1	150045165	150045320	reg1008543.p1	10.925	+	TSC_hg19_v1_chr1_+_150039889 AK298835 AK023170 AK293555 BC012932 AF165513 AK295529 AJ133421 AK223214 AK307949 CU688480	-5378	+	NM_007259 BC028382 AK301994 AK298786	-5853	+	AJ293573 BC072681 BC020622 TSC_hg19_v1_chr1_-_149982676 AK299790 NM_020205	-62620	-	TSC_hg19_v1_chr1_+_150122120 AK302255 AF192912 AF291105 NM_016274	76890	+	TSC_hg19_v1_chr1_+_150122268 AF217956 AF168676 BC010149	77062	+	TSC_hg19_v1_chr1_+_150122415 AB464030 AK222921 CU679641 DQ893381 DQ896780 AF073836	77196	+	AK298835|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK023170|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK293555|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##BC012932|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AF165513|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK295529|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AJ133421|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK223214|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK307949|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##NM_007259|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##BC028382|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK301994|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK298786|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AJ293573|OTUD7B|56957|OTU domain containing 7B##BC072681|OTUD7B|56957|OTU domain containing 7B##BC020622|OTUD7B|56957|OTU domain containing 7B##AK299790|OTUD7B|56957|OTU domain containing 7B##NM_020205|OTUD7B|56957|OTU domain containing 7B##AK302255|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF192912|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF291105|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##NM_016274|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF217956|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF168676|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##BC010149|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AK222921|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ893381|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ896780|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF073836|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1	0.145482	
chr19	35535372	35535534	reg1008598.p1	10.925	+	TSC_hg19_v1_chr19_+_35532642 AK315655	-2797	+	TSC_hg19_v1_chr19_+_35532623 BC025716	-2827	+	M18930 NM_002151 NM_182983 X07732	-4044	+	TSC_hg19_v1_chr19_+_35550794 X07002	15357	+	NM_001136007 NM_001136008 NM_001136009 NM_001136010 NM_001136011 NM_001136012 NM_005971 NM_021910 BC090044 U28249	71311	+	X93036 TSC_hg19_v1_chr19_+_35607221 BC005238 AK311689	71768	+	AK315655|HPN|3249|hepsin##BC025716|HPN|3249|hepsin##M18930|HPN|3249|hepsin##NM_002151|HPN|3249|hepsin##NM_182983|HPN|3249|hepsin##X07732|HPN|3249|hepsin##X07002|HPN|3249|hepsin##NM_001136007|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136008|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136009|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136010|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136011|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136012|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_005971|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_021910|FXYD3|5349|FXYD domain containing ion transport regulator 3##BC090044|FXYD3|5349|FXYD domain containing ion transport regulator 3##U28249|FXYD3|5349|FXYD domain containing ion transport regulator 3##X93036|FXYD3|5349|FXYD domain containing ion transport regulator 3##BC005238|FXYD3|5349|FXYD domain containing ion transport regulator 3##AK311689|FXYD3|5349|FXYD domain containing ion transport regulator 3	0.997751	CTCF.p2:-11:0.998
chr3	38016282	38016396	reg1011327.p1	10.925	+	TSC_hg19_v1_chr3_+_37903656 AJ575644 AJ575645 NM_001008392 NM_005808 AY279532 AY364238	-112673	+	TSC_hg19_v1_chr3_+_37493631 BC030198 D25303 NM_002207 L24158	-522585	+	NM_178339 NM_178342 AJ493604 AJ493603	-575325	+	TSC_hg19_v1_chr3_+_38032276 BC004300	15937	+	NM_015873	18738	+	TSC_hg19_v1_chr3_+_38035642 AK309304	19323	+	AJ575644|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AJ575645|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_001008392|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_005808|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY279532|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY364238|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##BC030198|ITGA9|3680|integrin, alpha 9##D25303|ITGA9|3680|integrin, alpha 9##NM_002207|ITGA9|3680|integrin, alpha 9##L24158|ITGA9|3680|integrin, alpha 9##NM_178339|C3orf35|339883|chromosome 3 open reading frame 35##NM_178342|C3orf35|339883|chromosome 3 open reading frame 35##AJ493604|C3orf35|339883|chromosome 3 open reading frame 35##AJ493603|C3orf35|339883|chromosome 3 open reading frame 35##BC004300|VILL|50853|villin-like##NM_015873|VILL|50853|villin-like##AK309304|VILL|50853|villin-like	0.990254	CTCF.p2:-20:0.990
chr4	86678273	86678374	reg1008951.p2	10.925	+	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	-281980	+	NM_014991	-790780	-	NM_001263 U65887	-1174230	+	TSC_hg19_v1_chr4_+_86699850 NM_001042669	21525	+	BC098580 TSC_hg19_v1_chr4_+_86699865 AK098193	21575	+	AK307423 TSC_hg19_v1_chr4_+_86749064	70731	+	NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24##BC098580|ARHGAP24|83478|Rho GTPase activating protein 24##AK098193|ARHGAP24|83478|Rho GTPase activating protein 24##AK307423|ARHGAP24|83478|Rho GTPase activating protein 24	0.9419	CTCF.p2:12:0.942
chr20	8112675	8112777	reg1008907.p1	10.924	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-112254	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-112319	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	-112426	-	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	304	+	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	936957	+	AK307482 TSC_hg19_v1_chr20_+_9049806	937072	+	AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4	0.11647	
chr20	57443903	57444007	reg1007918.p1	10.923	+	NM_001077490 NM_080425	-15920	+	AJ251759 TSC_hg19_v1_chr20_-_57425958	-17998	-	AF105253 NM_016592 TSC_hg19_v1_chr20_+_57414802	-29157	+	TSC_hg19_v1_chr20_+_57464205 X56009	20239	+	TSC_hg19_v1_chr20_+_57466445 NM_000516 NM_001077488 NM_001077489 NM_080426 AK026564 AK225818 BC008855 BC089157	22402	+	TSC_hg19_v1_chr20_+_57466632 BC108315 BC002722 BC104928 X04408	22659	+	NM_001077490|GNAS|2778|GNAS complex locus##NM_080425|GNAS|2778|GNAS complex locus##AJ251759|GNAS-AS1|149775|GNAS antisense RNA 1 (non-protein coding)##AF105253|GNAS|2778|GNAS complex locus##NM_016592|GNAS|2778|GNAS complex locus##X56009|GNAS|2778|GNAS complex locus##NM_000516|GNAS|2778|GNAS complex locus##NM_001077488|GNAS|2778|GNAS complex locus##NM_001077489|GNAS|2778|GNAS complex locus##NM_080426|GNAS|2778|GNAS complex locus##AK026564|GNAS|2778|GNAS complex locus##AK225818|GNAS|2778|GNAS complex locus##BC008855|GNAS|2778|GNAS complex locus##BC089157|GNAS|2778|GNAS complex locus##BC108315|GNAS|2778|GNAS complex locus##BC002722|GNAS|2778|GNAS complex locus##BC104928|GNAS|2778|GNAS complex locus##X04408|GNAS|2778|GNAS complex locus	0.332135	CTCF.p2:-7:0.332
chr4	148018290	148018403	reg1008964.p1	10.923	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	-151348	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	-458255	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	-575350	-	NM_001166055 NM_001957 AK315931 TSC_hg19_v1_chr4_+_148402083	383729	+	TSC_hg19_v1_chr4_+_148402117 D90348 S57498 X61950	383777	+	TSC_hg19_v1_chr4_+_148402244 AK312812 BC022511 AK304451 S45956	383964	+	AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001166055|EDNRA|1909|endothelin receptor type A##NM_001957|EDNRA|1909|endothelin receptor type A##AK315931|EDNRA|1909|endothelin receptor type A##D90348|EDNRA|1909|endothelin receptor type A##S57498|EDNRA|1909|endothelin receptor type A##X61950|EDNRA|1909|endothelin receptor type A##AK312812|EDNRA|1909|endothelin receptor type A##BC022511|EDNRA|1909|endothelin receptor type A##AK304451|EDNRA|1909|endothelin receptor type A##S45956|EDNRA|1909|endothelin receptor type A	0.999068	CTCF.p2:15:0.999
chr6	143834630	143834745	reg1008367.p2	10.923	+	CU678350 AK296485 BC003060 AK075458 TSC_hg19_v1_chr6_-_143832841 AY358551 BC051268 AK315475 NM_032020	-1793	-	TSC_hg19_v1_chr6_+_143771941 NM_003630 BC014551 BC015506 AB035307 AK025644 AK300907 AJ001625 AJ131389 AY277600 CR542062 CU677325	-62687	+	TSC_hg19_v1_chr6_-_143771811 BC037955 NM_182503	-62858	-	NM_001100166 NM_014721 AK300221 AB014580 BC152416 BC150630	94675	+	TSC_hg19_v1_chr6_+_143999112 AK298263 NM_001100164 NM_001100165 CR749345 AK297799	164490	+	TSC_hg19_v1_chr6_+_144164476 AK095269 BC009855 NM_032860	329802	+	AK296485|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC003060|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK075458|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AY358551|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC051268|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK315475|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_032020|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_003630|PEX3|8504|peroxisomal biogenesis factor 3##BC014551|PEX3|8504|peroxisomal biogenesis factor 3##BC015506|PEX3|8504|peroxisomal biogenesis factor 3##AB035307|PEX3|8504|peroxisomal biogenesis factor 3##AK025644|PEX3|8504|peroxisomal biogenesis factor 3##AK300907|PEX3|8504|peroxisomal biogenesis factor 3##AJ001625|PEX3|8504|peroxisomal biogenesis factor 3##AJ131389|PEX3|8504|peroxisomal biogenesis factor 3##AY277600|PEX3|8504|peroxisomal biogenesis factor 3##CR542062|PEX3|8504|peroxisomal biogenesis factor 3##BC037955|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_182503|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_001100166|PHACTR2|9749|phosphatase and actin regulator 2##NM_014721|PHACTR2|9749|phosphatase and actin regulator 2##AK300221|PHACTR2|9749|phosphatase and actin regulator 2##AB014580|PHACTR2|9749|phosphatase and actin regulator 2##BC152416|PHACTR2|9749|phosphatase and actin regulator 2##BC150630|PHACTR2|9749|phosphatase and actin regulator 2##AK298263|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100164|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100165|PHACTR2|9749|phosphatase and actin regulator 2##CR749345|PHACTR2|9749|phosphatase and actin regulator 2##AK297799|PHACTR2|9749|phosphatase and actin regulator 2##BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)##NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)	0.802657	CTCF.p2:5:0.803
chr9	72586949	72587061	reg1008708.p1	10.923	+	NM_001010940 BC150564 BC136709 BC144373 BC144374 BC144375	-151269	+	TSC_hg19_v1_chr9_-_72374870 AL832683 BC053622 NM_001099666	-212109	-	TSC_hg19_v1_chr9_-_72287241 AF029106 AF047347 NM_001163	-299801	-	BC040299 BC045569 NM_153267 BC063634	71502	+	AK304040 TSC_hg19_v1_chr9_+_72658764 BC016383 AK304531	71816	+	TSC_hg19_v1_chr9_-_72873739 CR936772 AK124136 BC040840	286759	-	NM_001010940|C9orf135|138255|chromosome 9 open reading frame 135##BC150564|C9orf135|138255|chromosome 9 open reading frame 135##BC136709|C9orf135|138255|chromosome 9 open reading frame 135##BC144373|C9orf135|138255|chromosome 9 open reading frame 135##BC144374|C9orf135|138255|chromosome 9 open reading frame 135##BC144375|C9orf135|138255|chromosome 9 open reading frame 135##AL832683|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##BC053622|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##NM_001099666|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##BC040299|MAMDC2|256691|MAM domain containing 2##BC045569|MAMDC2|256691|MAM domain containing 2##NM_153267|MAMDC2|256691|MAM domain containing 2##BC063634|MAMDC2|256691|MAM domain containing 2##AK304040|MAMDC2|256691|MAM domain containing 2##BC016383|MAMDC2|256691|MAM domain containing 2##AK304531|MAMDC2|256691|MAM domain containing 2##CR936772|LOC100507299|100507299|uncharacterized LOC100507299##AK124136|LOC100507299|100507299|uncharacterized LOC100507299##BC040840|LOC100507299|100507299|uncharacterized LOC100507299	0.965263	CTCF.p2:6:0.965
chr1	10567609	10567757	reg1011064.p1	10.922	+	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-32672	+	TSC_hg19_v1_chr1_-_10532605 NM_004401 NM_213566	-35061	-	TSC_hg19_v1_chr1_-_10532555 AB590590 BT006980 CU675773 BC000037 AF103799 AF087573 BC007721 AK313317 AK222546 U91985 BC007112	-35128	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	186868	-	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	289022	-	NM_001170754	474410	-	AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_004401|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##NM_213566|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BT006980|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC000037|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF103799|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF087573|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007721|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK313317|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK222546|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##U91985|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007112|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127	0.595584	CTCF.p2:-9:0.596
chr21	19061296	19061438	reg1010524.p1	10.922	+	TSC_hg19_v1_chr21_-_18985237 NM_001130914 NM_006806	-76100	-	TSC_hg19_v1_chr21_-_18985216 AK289408	-76163	-	D64110 TSC_hg19_v1_chr21_-_18985177 BC011957	-76227	-	TSC_hg19_v1_chr21_-_19191674 AF239726 AK023825 AK225123 AK314471 CR749496 NM_001100420 NM_001100421 NM_017447	130313	-	AF523314 AF523315 NM_001204175 NM_001204176 NM_001204177 NM_001204178 AF523313	228289	+	TSC_hg19_v1_chr21_+_19617149 AF257472 NM_024944 AY358608 BC009418	555795	+	NM_001130914|BTG3|10950|BTG family, member 3##NM_006806|BTG3|10950|BTG family, member 3##AK289408|BTG3|10950|BTG family, member 3##D64110|BTG3|10950|BTG family, member 3##BC011957|BTG3|10950|BTG family, member 3##AF239726|C21orf91|54149|chromosome 21 open reading frame 91##AK023825|C21orf91|54149|chromosome 21 open reading frame 91##AK225123|C21orf91|54149|chromosome 21 open reading frame 91##AK314471|C21orf91|54149|chromosome 21 open reading frame 91##CR749496|C21orf91|54149|chromosome 21 open reading frame 91##NM_001100420|C21orf91|54149|chromosome 21 open reading frame 91##NM_001100421|C21orf91|54149|chromosome 21 open reading frame 91##NM_017447|C21orf91|54149|chromosome 21 open reading frame 91##AF523314|CHODL|140578|chondrolectin##AF523315|CHODL|140578|chondrolectin##NM_001204175|CHODL|140578|chondrolectin##NM_001204176|CHODL|140578|chondrolectin##NM_001204177|CHODL|140578|chondrolectin##NM_001204178|CHODL|140578|chondrolectin##AF523313|CHODL|140578|chondrolectin##AF257472|CHODL|140578|chondrolectin##NM_024944|CHODL|140578|chondrolectin##AY358608|CHODL|140578|chondrolectin##BC009418|CHODL|140578|chondrolectin	1.803272	CTCF.p2:-27:0.869	CTCF.p2:101:0.923
chr8	6281559	6281686	reg1009389.p2	10.922	+	AK301702 TSC_hg19_v1_chr8_+_6264167	-17450	+	NM_001172574 NM_001172575 NM_024596 BC056195 BC030702 AK308387 TSC_hg19_v1_chr8_+_6264158	-17487	+	TSC_hg19_v1_chr8_-_6264070 AK025595 BC024246	-17548	-	HQ258258 AF187858 AB009865 BC126200 BC126202 BC143902 AF218015 BC022490 AK075219 AK225698 AK290070 AK310171 AK312541 NM_001118887 NM_001118888 NM_001147 TSC_hg19_v1_chr8_-_6420798 AJ289781	139069	-	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	284269	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	284318	+	AK301702|MCPH1|79648|microcephalin 1##NM_001172574|MCPH1|79648|microcephalin 1##NM_001172575|MCPH1|79648|microcephalin 1##NM_024596|MCPH1|79648|microcephalin 1##BC056195|MCPH1|79648|microcephalin 1##BC030702|MCPH1|79648|microcephalin 1##AK308387|MCPH1|79648|microcephalin 1##AK025595|LOC100287015|100287015|uncharacterized LOC100287015##HQ258258|ANGPT2|285|angiopoietin 2##AF187858|ANGPT2|285|angiopoietin 2##AB009865|ANGPT2|285|angiopoietin 2##BC126200|ANGPT2|285|angiopoietin 2##BC126202|ANGPT2|285|angiopoietin 2##BC143902|ANGPT2|285|angiopoietin 2##AF218015|ANGPT2|285|angiopoietin 2##BC022490|ANGPT2|285|angiopoietin 2##AK075219|ANGPT2|285|angiopoietin 2##AK225698|ANGPT2|285|angiopoietin 2##AK290070|ANGPT2|285|angiopoietin 2##AK310171|ANGPT2|285|angiopoietin 2##AK312541|ANGPT2|285|angiopoietin 2##NM_001118887|ANGPT2|285|angiopoietin 2##NM_001118888|ANGPT2|285|angiopoietin 2##NM_001147|ANGPT2|285|angiopoietin 2##AJ289781|ANGPT2|285|angiopoietin 2##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	0.646315	CTCF.p2:-15:0.646
chr9	77880525	77880648	reg1010825.p1	10.922	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	-177076	+	TSC_hg19_v1_chr9_+_77703406 NM_012383	-177186	+	BC001366 TSC_hg19_v1_chr9_-_77703070 AK000566 AK097144 AK023413 BC036804 NM_001127603 NM_017881 BC026243	-177498	-	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	625049	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	1128805	-	AY196293 NM_001097634	1175995	+	AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1##NM_012383|OSTF1|26578|osteoclast stimulating factor 1##BC001366|C9orf95|54981|chromosome 9 open reading frame 95##AK000566|C9orf95|54981|chromosome 9 open reading frame 95##AK097144|C9orf95|54981|chromosome 9 open reading frame 95##AK023413|C9orf95|54981|chromosome 9 open reading frame 95##BC036804|C9orf95|54981|chromosome 9 open reading frame 95##NM_001127603|C9orf95|54981|chromosome 9 open reading frame 95##NM_017881|C9orf95|54981|chromosome 9 open reading frame 95##BC026243|C9orf95|54981|chromosome 9 open reading frame 95##NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.999331	CTCF.p2:-6:0.999
chr6	53357838	53357971	reg1008233.p1	10.921	+	AK299674 AK302948 TSC_hg19_v1_chr6_-_53213749 AF338241 NM_001242828 NM_001242830 NM_001242831 NM_021814	-144043	-	TSC_hg19_v1_chr6_-_53213736 AB209798 AL136939 BC074503 BC067123	-144183	-	AK125098 TSC_hg19_v1_chr6_-_53213676	-144265	-	TSC_hg19_v1_chr6_-_53409483 AB516284 CU691792 CU692650 EU832317 EU832402	51562	-	TSC_hg19_v1_chr6_-_53409528 BC039894 M90656	51613	-	TSC_hg19_v1_chr6_-_53409821 AB262176 BC022487	51909	-	AK299674|ELOVL5|60481|ELOVL fatty acid elongase 5##AK302948|ELOVL5|60481|ELOVL fatty acid elongase 5##AF338241|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242828|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242830|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242831|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_021814|ELOVL5|60481|ELOVL fatty acid elongase 5##AB209798|ELOVL5|60481|ELOVL fatty acid elongase 5##AL136939|ELOVL5|60481|ELOVL fatty acid elongase 5##BC074503|ELOVL5|60481|ELOVL fatty acid elongase 5##BC067123|ELOVL5|60481|ELOVL fatty acid elongase 5##AK125098|ELOVL5|60481|ELOVL fatty acid elongase 5##AB516284|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EU832317|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EU832402|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC039894|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##M90656|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AB262176|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC022487|GCLC|2729|glutamate-cysteine ligase, catalytic subunit	1.016138	CTCF.p2:3:0.815	CTCF.p2:88:0.201
chr1	146861797	146861899	reg1008898.p1	10.920	+	TSC_hg19_v1_chr1_+_146714335 AK298424 AK297135 BC077717 AK293157 BC001171 AF054177 BC043501 BC053354 BC005038	-147484	+	NM_004284 TSC_hg19_v1_chr1_+_146714333 EF560738 AF537213 AK001342 AK027631 AK307400	-147537	+	AK314647 TSC_hg19_v1_chr1_-_146697221 AK022172 NM_001144829 NM_001144830 NM_001461	-164656	-	NM_004326 Y13620 AK298105 TSC_hg19_v1_chr1_+_147013319	151403	+	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	280646	-	BC013313 NM_181703	370850	-	AK298424|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK297135|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC077717|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK293157|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC001171|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF054177|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC043501|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC053354|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC005038|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##NM_004284|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##EF560738|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF537213|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK001342|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK027631|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK307400|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK314647|FMO5|2330|flavin containing monooxygenase 5##AK022172|FMO5|2330|flavin containing monooxygenase 5##NM_001144829|FMO5|2330|flavin containing monooxygenase 5##NM_001144830|FMO5|2330|flavin containing monooxygenase 5##NM_001461|FMO5|2330|flavin containing monooxygenase 5##NM_004326|BCL9|607|B-cell CLL/lymphoma 9##Y13620|BCL9|607|B-cell CLL/lymphoma 9##AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa	0.908193	CTCF.p2:3:0.908
chr13	23370341	23370474	reg1009146.p2	10.919	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-1125259	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-1192047	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-1192098	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	384708	+	TSC_hg19_v1_chr13_-_23949652 AK125458	579243	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	637433	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.95855	CTCF.p2:19:0.959
chr13	99848846	99848958	reg1008950.p1	10.919	+	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	-110211	-	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	-218612	-	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	-443997	-	AK290342 NM_001144072	3776	+	TSC_hg19_v1_chr13_-_99852951 BC043515 AK097488	4065	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	4217	+	BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9##AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AK290342|UBAC2|337867|UBA domain containing 2##NM_001144072|UBAC2|337867|UBA domain containing 2##BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2	0.033775	
chr20	54919051	54919166	reg1010894.p1	10.919	+	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	-95321	+	NM_080617	-339097	-	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-1826894	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	14916	+	BC002499 TSC_hg19_v1_chr20_-_54967272 BC006423 AF011468 BC001280 D84212 AK312776 BC027464 AK301769 NM_003600 NM_198433 NM_198434 NM_198435 NM_198436 NM_198437	48177	-	TSC_hg19_v1_chr20_+_54967443 NM_001033521 AK307144	48316	+	BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B##BC002499|AURKA|6790|aurora kinase A##BC006423|AURKA|6790|aurora kinase A##AF011468|AURKA|6790|aurora kinase A##BC001280|AURKA|6790|aurora kinase A##D84212|AURKA|6790|aurora kinase A##AK312776|AURKA|6790|aurora kinase A##BC027464|AURKA|6790|aurora kinase A##AK301769|AURKA|6790|aurora kinase A##NM_003600|AURKA|6790|aurora kinase A##NM_198433|AURKA|6790|aurora kinase A##NM_198434|AURKA|6790|aurora kinase A##NM_198435|AURKA|6790|aurora kinase A##NM_198436|AURKA|6790|aurora kinase A##NM_198437|AURKA|6790|aurora kinase A##NM_001033521|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa	0.976874	CTCF.p2:1:0.977
chr2	192419946	192420073	reg1010106.p1	10.919	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-309911	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-403702	-	TSC_hg19_v1_chr2_-_192015965 NM_003151	-404050	-	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	122853	+	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	291729	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	291962	-	NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##NM_003151|STAT4|6775|signal transducer and activator of transcription 4##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response	0.999864	CTCF.p2:-12:1.000
chr6	144263391	144263511	reg1010797.p1	10.919	+	BC146950 BC146969 BC171862 NM_001013623	-77879	+	TSC_hg19_v1_chr6_+_144164521 AK300360	-98915	+	TSC_hg19_v1_chr6_+_144164476 AK095269 BC009855 NM_032860	-98962	+	EF100446 EF100447 EF100448 EF100449 EF100450 EF100451 EF100452 TSC_hg19_v1_chr6_-_144329322	65837	-	TSC_hg19_v1_chr6_-_144329394 AK314570 BC059359 AK096331 NM_001080952 NM_001080953 NM_001080954 NM_001080956 NM_002656 NM_006718 AJ311395 U72621	66013	-	EF100438 EF100439 EF100440 EF100441 EF100442 EF100443 EF100444 EF100445 TSC_hg19_v1_chr6_-_144385724 NM_001080951 NM_001080955	122239	-	BC146950|C6orf94|153918|chromosome 6 open reading frame 94##BC146969|C6orf94|153918|chromosome 6 open reading frame 94##BC171862|C6orf94|153918|chromosome 6 open reading frame 94##NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94##AK300360|LTV1|84946|LTV1 homolog (S. cerevisiae)##BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)##NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)##EF100446|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100447|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100448|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100449|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100450|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100451|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100452|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AK314570|PLAGL1|5325|pleiomorphic adenoma gene-like 1##BC059359|HYMAI|57061|hydatidiform mole associated and imprinted (non-protein coding)##AK096331|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080952|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080953|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080954|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080956|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_002656|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_006718|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AJ311395|PLAGL1|5325|pleiomorphic adenoma gene-like 1##U72621|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100438|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100439|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100440|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100441|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100442|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100443|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100444|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100445|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080951|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080955|PLAGL1|5325|pleiomorphic adenoma gene-like 1	0.98669	CTCF.p2:-21:0.987
chr11	19925189	19925312	reg1009718.p1	10.918	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	-190384	+	AB063115 NM_001111018 AJ488205	-552935	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-662049	-	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	119138	+	TSC_hg19_v1_chr11_+_20049136 AK307574	123882	+	AK290458 TSC_hg19_v1_chr11_+_20070637	145373	+	AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##AK290458|NAV2|89797|neuron navigator 2	0.977712	CTCF.p2:11:0.978
chr5	107817173	107817330	reg1009248.p1	10.918	+	BC063316 NM_001163315	-99453	-	TSC_hg19_v1_chr5_-_107717106 AK126722	-100121	-	AK308672 NM_001962 U26403	-810661	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	246729	-	AK293376 J03358 NM_005246 AK296874	266311	+	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	267421	+	BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AB593118|HP07349|100652853|uncharacterized protein HP07349##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase	0.993091	CTCF.p2:-16:0.993
chr6	149350115	149350219	reg1007782.p1	10.918	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-281958	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-685976	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-686177	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	288936	+	AK315038 NM_015093 AK307650	289274	+	AY340238 NM_001002255 BC130305 HQ258040	371341	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.997452	CTCF.p2:-15:0.997
chr9	21455441	21455531	reg1007387.p1	10.917	+	NM_024013 V00538 V00537 BC112300 BC112302 BC074928 BC074929 AB464595 CU686802 HQ258738 JN848523	-15007	+	K01900 NM_002170 BC104828 BC104830 V00545 V00550	-46346	+	AY255838 V00548 AB590747 CR541921 JN848522 BC074936 BC074937 BC104163 BC104164 M54886 V00544 V00549 NM_000605	-70160	-	AY358570 NM_176891	26825	-	AK124391 TSC_hg19_v1_chr9_-_21559834	104296	-	TSC_hg19_v1_chr9_+_21802647 AF109294 AY712791 NM_002451 U22233 L40432 AK300592 AK309365	347154	+	NM_024013|IFNA1|3439|interferon, alpha 1##V00538|IFNA1|3439|interferon, alpha 1##V00537|IFNA1|3439|interferon, alpha 1##BC112300|IFNA1|3439|interferon, alpha 1##BC112302|IFNA1|3439|interferon, alpha 1##BC074928|IFNA1|3439|interferon, alpha 1##BC074929|IFNA1|3439|interferon, alpha 1##HQ258738|IFNA1|3439|interferon, alpha 1##K01900|IFNA8|3445|interferon, alpha 8##NM_002170|IFNA8|3445|interferon, alpha 8##BC104828|IFNA8|3445|interferon, alpha 8##BC104830|IFNA8|3445|interferon, alpha 8##V00545|IFNA8|3445|interferon, alpha 8##V00550|IFNA8|3445|interferon, alpha 8##AY255838|IFNA2|3440|interferon, alpha 2##V00548|IFNA2|3440|interferon, alpha 2##CR541921|IFNA2|3440|interferon, alpha 2##BC074936|IFNA2|3440|interferon, alpha 2##BC074937|IFNA2|3440|interferon, alpha 2##BC104163|IFNA2|3440|interferon, alpha 2##BC104164|IFNA2|3440|interferon, alpha 2##M54886|IFNA2|3440|interferon, alpha 2##V00544|IFNA2|3440|interferon, alpha 2##V00549|IFNA2|3440|interferon, alpha 2##NM_000605|IFNA2|3440|interferon, alpha 2##AY358570|IFNE|338376|interferon, epsilon##NM_176891|IFNE|338376|interferon, epsilon##AK124391|MIR31HG|554202|MIR31 host gene (non-protein coding)##AF109294|MTAP|4507|methylthioadenosine phosphorylase##AY712791|MTAP|4507|methylthioadenosine phosphorylase##NM_002451|MTAP|4507|methylthioadenosine phosphorylase##U22233|MTAP|4507|methylthioadenosine phosphorylase##L40432|MTAP|4507|methylthioadenosine phosphorylase##AK300592|MTAP|4507|methylthioadenosine phosphorylase##AK309365|MTAP|4507|methylthioadenosine phosphorylase	0.96307	CTCF.p2:15:0.963
chr15	31727632	31727765	reg1009292.p2	10.916	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-108360	+	NM_001243538	-204649	-	GQ502181 HM135791 NM_001252020	-274270	-	AJ430383 NM_130901	219843	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	435131	-	TSC_hg19_v1_chr15_-_32162898 AK126002	435245	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.39337	CTCF.p2:-38:0.393
chr19	10975209	10975327	reg1011350.p1	10.916	+	BC157863 NM_001136482	-16163	+	AB528501 DQ892640 DQ895878 BC002443 BC018831 TSC_hg19_v1_chr19_-_10946889 U41804 NM_006858	-28344	-	TSC_hg19_v1_chr19_+_10828827 BC039596 AK289831	-146409	+	TSC_hg19_v1_chr19_+_10982255 NM_199141	6982	+	TSC_hg19_v1_chr19_+_10982381 AL833242	7168	+	CU680474 AB463355 AM392632 TSC_hg19_v1_chr19_-_11039312 BC000056 BC013014 NM_024029	63971	-	BC157863|C19orf38|255809|chromosome 19 open reading frame 38##NM_001136482|C19orf38|255809|chromosome 19 open reading frame 38##DQ892640|TMED1|11018|transmembrane emp24 protein transport domain containing 1##DQ895878|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC002443|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC018831|TMED1|11018|transmembrane emp24 protein transport domain containing 1##U41804|TMED1|11018|transmembrane emp24 protein transport domain containing 1##NM_006858|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC039596|DNM2|1785|dynamin 2##AK289831|DNM2|1785|dynamin 2##NM_199141|CARM1|10498|coactivator-associated arginine methyltransferase 1##AL833242|CARM1|10498|coactivator-associated arginine methyltransferase 1##AM392632|YIPF2|78992|Yip1 domain family, member 2##BC000056|YIPF2|78992|Yip1 domain family, member 2##BC013014|YIPF2|78992|Yip1 domain family, member 2##NM_024029|YIPF2|78992|Yip1 domain family, member 2	0.986573	CTCF.p2:-1:0.987
chr3	169755657	169755772	reg1008750.p2	10.916	+	TSC_hg19_v1_chr3_+_169684598 NM_003262 AK294504 BC003677 BC007040 BC012035 BX648539 D87127 U93239 EU832302 EU832386	-71126	+	BX648991 BX648534 BX648989 BX537903 NM_182610	-126294	+	HQ258307 BC117401 BC143569 BC143582 AY358138 AK097338 NM_024727 AK026912	-168057	-	TSC_hg19_v1_chr3_+_169755748 NM_014373	40	+	TSC_hg19_v1_chr3_+_169755782 BC000181	76	+	TSC_hg19_v1_chr3_+_169755984 AK311293	238	+	NM_003262|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC003677|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC007040|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC012035|SEC62|7095|SEC62 homolog (S. cerevisiae)##BX648539|SEC62|7095|SEC62 homolog (S. cerevisiae)##D87127|SEC62|7095|SEC62 homolog (S. cerevisiae)##U93239|SEC62|7095|SEC62 homolog (S. cerevisiae)##EU832302|SEC62|7095|SEC62 homolog (S. cerevisiae)##EU832386|SEC62|7095|SEC62 homolog (S. cerevisiae)##BX648991|SAMD7|344658|sterile alpha motif domain containing 7##BX648534|SAMD7|344658|sterile alpha motif domain containing 7##BX648989|SAMD7|344658|sterile alpha motif domain containing 7##BX537903|SAMD7|344658|sterile alpha motif domain containing 7##NM_182610|SAMD7|344658|sterile alpha motif domain containing 7##HQ258307|LRRC31|79782|leucine rich repeat containing 31##BC117401|LRRC31|79782|leucine rich repeat containing 31##BC143569|LRRC31|79782|leucine rich repeat containing 31##BC143582|LRRC31|79782|leucine rich repeat containing 31##AY358138|LRRC31|79782|leucine rich repeat containing 31##AK097338|LRRC31|79782|leucine rich repeat containing 31##NM_024727|LRRC31|79782|leucine rich repeat containing 31##AK026912|LRRC31|79782|leucine rich repeat containing 31##NM_014373|GPR160|26996|G protein-coupled receptor 160##BC000181|GPR160|26996|G protein-coupled receptor 160##AK311293|GPR160|26996|G protein-coupled receptor 160	0.364591	CTCF.p2:-8:0.291
chr4	169946034	169946148	reg1009068.p1	10.916	+	BC021973 BC033650 TSC_hg19_v1_chr4_-_169931407 AK027337 AK291756 AK299847 AL833393 NM_032783	-14633	-	TSC_hg19_v1_chr4_+_169753245 NM_001166110 AB023209	-192914	+	TSC_hg19_v1_chr4_+_169552755 NM_001166109 AK095512	-393295	+	BC041023 TSC_hg19_v1_chr4_-_170077830	131728	-	TSC_hg19_v1_chr4_-_170192099 BC053671	245956	-	AK021429 TSC_hg19_v1_chr4_-_170192108	246016	-	BC021973|CBR4|84869|carbonyl reductase 4##BC033650|CBR4|84869|carbonyl reductase 4##AK027337|CBR4|84869|carbonyl reductase 4##AK291756|CBR4|84869|carbonyl reductase 4##AL833393|CBR4|84869|carbonyl reductase 4##NM_032783|CBR4|84869|carbonyl reductase 4##NM_001166110|PALLD|23022|palladin, cytoskeletal associated protein##AB023209|PALLD|23022|palladin, cytoskeletal associated protein##NM_001166109|PALLD|23022|palladin, cytoskeletal associated protein##AK095512|PALLD|23022|palladin, cytoskeletal associated protein##BC041023|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1##AK021429|SH3RF1|57630|SH3 domain containing ring finger 1	0.857707	CTCF.p2:10:0.858
chr4	177968627	177968757	reg1009601.p2	10.916	+	AK313879 BC035212 U58111 X94216 U43142 BC063685 NM_005429 TSC_hg19_v1_chr4_-_177713956	-254882	-	TSC_hg19_v1_chr4_-_177241652 AK096223	-727061	-	TSC_hg19_v1_chr4_+_177241122 AK026302 AL136660 AY359044 BC043490 BC053883 BC047290 CU690386 EU831652 EU831735	-727524	+	TSC_hg19_v1_chr4_+_178231006 NM_018248	262301	+	TSC_hg19_v1_chr4_+_178231027 AK001720 BC025954 AK307692 AB079071	262368	+	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	394849	-	AK313879|VEGFC|7424|vascular endothelial growth factor C##BC035212|VEGFC|7424|vascular endothelial growth factor C##U58111|VEGFC|7424|vascular endothelial growth factor C##X94216|VEGFC|7424|vascular endothelial growth factor C##U43142|VEGFC|7424|vascular endothelial growth factor C##BC063685|VEGFC|7424|vascular endothelial growth factor C##NM_005429|VEGFC|7424|vascular endothelial growth factor C##AK026302|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AL136660|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AY359044|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC043490|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC053883|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC047290|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831652|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831735|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##NM_018248|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK001720|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##BC025954|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK307692|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AB079071|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase	0.996647	CTCF.p2:0:0.997
chr2	242820306	242820402	reg1009059.p1	10.915	+	AK090909 AX746675 BC113517 BC113519 NM_173821	-8472	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	-19330	-	AK091038 AX746745 NM_001167599 NM_001167602 NM_080741 BC012899	-68304	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	210505	+	None	None	None	None	None	None	AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1##AK091038|NEU4|129807|sialidase 4##NM_001167599|NEU4|129807|sialidase 4##NM_001167602|NEU4|129807|sialidase 4##NM_080741|NEU4|129807|sialidase 4##BC012899|NEU4|129807|sialidase 4##AK298283|LOC728323|728323|uncharacterized LOC728323	0.758883	CTCF.p2:-23:0.667
chr10	73074155	73074272	reg1008754.p1	10.914	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-101833	+	NM_000281	-425673	-	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	-425911	-	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	4812	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	4833	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	82525	+	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_000281|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23	0.972368	CTCF.p2:17:0.972
chr1	151224314	151224428	reg1007895.p1	10.913	+	TSC_hg19_v1_chr1_+_151171050 AK309826 NM_001135636 NM_001135637 NM_001135638 NM_003557 AK295691 BC007833 U78576 BC007005 U78577 U78575 AK291015	-53338	+	TSC_hg19_v1_chr1_-_151162674 AK310045 DQ655941	-61698	-	DQ892940 DQ896189 AB464341 BT019356 BT019357 AK222935 AK222939 TSC_hg19_v1_chr1_-_151162644 BC003151 D43642 NM_005997 AK225130 AK297565	-61750	-	TSC_hg19_v1_chr1_+_151227206 NM_002810 U24704	2826	+	TSC_hg19_v1_chr1_+_151227209 BC072008	2850	+	TSC_hg19_v1_chr1_+_151227240 AB033605 BC002365 AB527552	2876	+	AK309826|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_001135636|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_001135637|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_001135638|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_003557|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##AK295691|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##BC007833|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##U78576|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##U78577|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##U78575|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##AK291015|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##AK310045|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##DQ655941|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##DQ892940|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##DQ896189|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##BT019356|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##BT019357|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK222935|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK222939|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##BC003151|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##D43642|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##NM_005997|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK225130|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK297565|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##NM_002810|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##U24704|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##BC072008|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##AB033605|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##BC002365|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	0.0	
chr15	82810386	82810489	reg1009162.p2	10.913	+	NM_198181 CR936812	-88221	+	TSC_hg19_v1_chr15_+_82647308 BC066934	-163106	+	NM_001164465	-168732	-	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	14456	-	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	134355	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	134453	+	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like	0.823666	CTCF.p2:-8:0.800
chr7	81345436	81345563	reg1009669.p1	10.913	+	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-796825	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-797065	-	HM217020 HM217021 HM217022 HM217023 HM217024 HM217025 HM217026 AB590184 CU678951 DQ893062 DQ896314 TSC_hg19_v1_chr7_+_80276126	-1069452	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	53875	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	727347	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	727581	-	AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##HM217020|CD36|948|CD36 molecule (thrombospondin receptor)##HM217021|CD36|948|CD36 molecule (thrombospondin receptor)##HM217022|CD36|948|CD36 molecule (thrombospondin receptor)##HM217023|CD36|948|CD36 molecule (thrombospondin receptor)##HM217024|CD36|948|CD36 molecule (thrombospondin receptor)##HM217025|CD36|948|CD36 molecule (thrombospondin receptor)##HM217026|CD36|948|CD36 molecule (thrombospondin receptor)##DQ893062|CD36|948|CD36 molecule (thrombospondin receptor)##DQ896314|CD36|948|CD36 molecule (thrombospondin receptor)##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1	0.906019	CTCF.p2:26:0.858
chr12	100628619	100628736	reg1009584.p2	10.911	+	TSC_hg19_v1_chr12_+_100594593 BC015107 NM_022496 AF161399 AK222959 AB038229 AF212251 BC050679 AK023495 AK023684 AK296991 AF175226 CU677213	-34082	+	TSC_hg19_v1_chr12_-_100536644 NM_001006947 NM_015054	-92029	-	BC127017 AK125813 TSC_hg19_v1_chr12_-_100536637 BC014891	-92128	-	BC015117 TSC_hg19_v1_chr12_-_100660855 BC039480 AK090824 AX746635 BC100927 BC100928 BC100929 BC100930 NM_152317	32135	-	TSC_hg19_v1_chr12_+_100661023 AK000936 BC011525	32323	+	TSC_hg19_v1_chr12_+_100661170 AK125091	32503	+	BC015107|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##NM_022496|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AF161399|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK222959|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AB038229|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AF212251|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##BC050679|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK023495|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK023684|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK296991|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AF175226|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##NM_001006947|UHRF1BP1L|23074|UHRF1 binding protein 1-like##NM_015054|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC127017|UHRF1BP1L|23074|UHRF1 binding protein 1-like##AK125813|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC014891|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC015117|DEPDC4|120863|DEP domain containing 4##BC039480|DEPDC4|120863|DEP domain containing 4##AK090824|DEPDC4|120863|DEP domain containing 4##BC100927|DEPDC4|120863|DEP domain containing 4##BC100928|DEPDC4|120863|DEP domain containing 4##BC100929|DEPDC4|120863|DEP domain containing 4##BC100930|DEPDC4|120863|DEP domain containing 4##NM_152317|DEPDC4|120863|DEP domain containing 4##AK000936|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##BC011525|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##AK125091|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	0.416469	CTCF.p2:0:0.416
chr15	83669272	83669407	reg1010137.p1	10.911	+	NM_031452 TSC_hg19_v1_chr15_+_83654965 BC112329 AK027095 BC003627 BC027181	-14361	+	TSC_hg19_v1_chr15_-_83654854 AK097109	-14480	-	AF081530 TSC_hg19_v1_chr15_-_83621443 AK292772 BC012109 NM_004839 NM_199330	-47917	-	TSC_hg19_v1_chr15_-_83680364 AK311484 AK125586 BC019820 AK312160	11010	-	TSC_hg19_v1_chr15_-_83680376 NM_001160113 NM_001160114 NM_001160115 NM_001160116 NM_144597	11041	-	TSC_hg19_v1_chr15_-_83735995 AB462966 AF529369 AM393763 AY364253 DQ891458 DQ894635 CU688394 BC017464 AK000731 AK225355 AK225362 AF355402 AF257241 AL136853	66605	-	NM_031452|FAM103A1|83640|family with sequence similarity 103, member A1##BC112329|FAM103A1|83640|family with sequence similarity 103, member A1##AK027095|FAM103A1|83640|family with sequence similarity 103, member A1##BC003627|FAM103A1|83640|family with sequence similarity 103, member A1##BC027181|FAM103A1|83640|family with sequence similarity 103, member A1##AK097109|LOC100131860|100131860|uncharacterized LOC100131860##AF081530|HOMER2|9455|homer homolog 2 (Drosophila)##AK292772|HOMER2|9455|homer homolog 2 (Drosophila)##BC012109|HOMER2|9455|homer homolog 2 (Drosophila)##NM_004839|HOMER2|9455|homer homolog 2 (Drosophila)##NM_199330|HOMER2|9455|homer homolog 2 (Drosophila)##AK311484|C15orf40|123207|chromosome 15 open reading frame 40##AK125586|C15orf40|123207|chromosome 15 open reading frame 40##BC019820|C15orf40|123207|chromosome 15 open reading frame 40##AK312160|C15orf40|123207|chromosome 15 open reading frame 40##NM_001160113|C15orf40|123207|chromosome 15 open reading frame 40##NM_001160114|C15orf40|123207|chromosome 15 open reading frame 40##NM_001160115|C15orf40|123207|chromosome 15 open reading frame 40##NM_001160116|C15orf40|123207|chromosome 15 open reading frame 40##NM_144597|C15orf40|123207|chromosome 15 open reading frame 40##AF529369|BTBD1|53339|BTB (POZ) domain containing 1##AM393763|BTBD1|53339|BTB (POZ) domain containing 1##AY364253|BTBD1|53339|BTB (POZ) domain containing 1##DQ891458|BTBD1|53339|BTB (POZ) domain containing 1##DQ894635|BTBD1|53339|BTB (POZ) domain containing 1##BC017464|BTBD1|53339|BTB (POZ) domain containing 1##AK000731|BTBD1|53339|BTB (POZ) domain containing 1##AK225355|BTBD1|53339|BTB (POZ) domain containing 1##AK225362|BTBD1|53339|BTB (POZ) domain containing 1##AF355402|BTBD1|53339|BTB (POZ) domain containing 1##AF257241|BTBD1|53339|BTB (POZ) domain containing 1##AL136853|BTBD1|53339|BTB (POZ) domain containing 1	0.491756	CTCF.p2:25:0.492
chr2	161067271	161067388	reg1008398.p1	10.911	+	AK304203 AL831998 TSC_hg19_v1_chr2_-_161056784 AK290300 AK313944	-10534	-	AB463075 AM393800 M35198 NM_000888 BC121178 BC143656	-10742	-	U17033 U17034 NM_001007267 NM_001195641 NM_007366 TSC_hg19_v1_chr2_-_160919148	-148194	-	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	62860	-	CU676342 D28482 X77494 AK225887 L11289 TSC_hg19_v1_chr2_-_161350025 AK309949 BC012992 BC012993 AK297812	282630	-	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	282988	-	AK304203|ITGB6|3694|integrin, beta 6##AL831998|ITGB6|3694|integrin, beta 6##AK290300|ITGB6|3694|integrin, beta 6##AK313944|ITGB6|3694|integrin, beta 6##AM393800|ITGB6|3694|integrin, beta 6##M35198|ITGB6|3694|integrin, beta 6##NM_000888|ITGB6|3694|integrin, beta 6##BC121178|ITGB6|3694|integrin, beta 6##BC143656|ITGB6|3694|integrin, beta 6##U17033|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##U17034|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001007267|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001195641|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_007366|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	0.904517	CTCF.p2:30:0.905
chr3	171552090	171552221	reg1009836.p1	10.911	+	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	-23900	-	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-374084	-	NM_000340	-807388	-	NM_001164436 AK026825	8993	+	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	205260	+	TSC_hg19_v1_chr3_+_171757437 AK127826	205279	+	AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B##AK127826|FNDC3B|64778|fibronectin type III domain containing 3B	0.021666	
chr7	35559975	35560092	reg1010681.p1	10.911	+	TSC_hg19_v1_chr7_-_35293701 NM_001077653 NM_001166220 DQ986374	-266303	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	-334241	-	DQ287932 NM_015283	-482381	-	TSC_hg19_v1_chr7_-_35734533 BC005091	174563	-	BC020264 TSC_hg19_v1_chr7_-_35734751 AK055708	174706	-	TSC_hg19_v1_chr7_-_35734795 NM_022373	174745	-	NM_001077653|TBX20|57057|T-box 20##NM_001166220|TBX20|57057|T-box 20##DQ986374|TBX20|57057|T-box 20##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC005091|HERPUD2|64224|HERPUD family member 2##BC020264|HERPUD2|64224|HERPUD family member 2##AK055708|HERPUD2|64224|HERPUD family member 2##NM_022373|HERPUD2|64224|HERPUD family member 2	0.593841	CTCF.p2:-6:0.594
chr9	80479589	80479717	reg1009629.p1	10.911	+	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	-216422	-	AK027023 TSC_hg19_v1_chr9_+_79968352	-511305	+	TSC_hg19_v1_chr9_+_79792474 AB054005	-687145	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	166531	-	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	371377	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	432405	+	BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1	0.231917	CTCF.p2:-11:0.232
chr13	49855363	49855476	reg1008554.p1	10.910	+	NM_001193478 NM_030911 TSC_hg19_v1_chr13_+_49822076 BC022801 BC092434 AK312835 BC032889 BC070238 AK297400 BC009562 AY027525 BC048092 BC125202 BC125203	-33330	+	AB463896 AY603964 NM_001507	-60947	+	TSC_hg19_v1_chr13_+_49684452 AK302415 AJ749707 NM_014923 AB023187 BC107793	-170963	+	NM_030925	120315	-	TSC_hg19_v1_chr13_-_50018201 AY211923 AY288977 BX647518 NM_001079670	162762	-	TSC_hg19_v1_chr13_+_50018457 NM_031915 AK308220 AF334407	163051	+	NM_001193478|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##NM_030911|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC022801|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC092434|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AK312835|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC032889|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC070238|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AK297400|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC009562|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AY027525|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC048092|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC125202|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC125203|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AY603964|MLNR|2862|motilin receptor##NM_001507|MLNR|2862|motilin receptor##AK302415|FNDC3A|22862|fibronectin type III domain containing 3A##AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A##NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A##AB023187|FNDC3A|22862|fibronectin type III domain containing 3A##BC107793|FNDC3A|22862|fibronectin type III domain containing 3A##NM_030925|CAB39L|81617|calcium binding protein 39-like##AY211923|CAB39L|81617|calcium binding protein 39-like##AY288977|CAB39L|81617|calcium binding protein 39-like##BX647518|CAB39L|81617|calcium binding protein 39-like##NM_001079670|CAB39L|81617|calcium binding protein 39-like##NM_031915|SETDB2|83852|SET domain, bifurcated 2##AK308220|SETDB2|83852|SET domain, bifurcated 2##AF334407|SETDB2|83852|SET domain, bifurcated 2	0.999838	CTCF.p2:-7:1.000
chr5	180033073	180033185	reg1010538.p1	10.910	+	AB590701 AF313458 BC029176 AF086152 AF436839 AY040564 BC072673 NM_052863 AY359064	-14627	-	TSC_hg19_v1_chr5_+_179921452 AB033020 BC152469	-111671	+	TSC_hg19_v1_chr5_+_179921385 NM_015455	-111736	+	EU826564 EU826565 EU826566 X68203 AY233382 AY233383 X69878 TSC_hg19_v1_chr5_-_180076569	43427	-	TSC_hg19_v1_chr5_-_180076572 U43143	43444	-	AK291679 AK309910 TSC_hg19_v1_chr5_-_180076601	43473	-	AF313458|SCGB3A1|92304|secretoglobin, family 3A, member 1##BC029176|SCGB3A1|92304|secretoglobin, family 3A, member 1##AF086152|SCGB3A1|92304|secretoglobin, family 3A, member 1##AF436839|SCGB3A1|92304|secretoglobin, family 3A, member 1##AY040564|SCGB3A1|92304|secretoglobin, family 3A, member 1##BC072673|SCGB3A1|92304|secretoglobin, family 3A, member 1##NM_052863|SCGB3A1|92304|secretoglobin, family 3A, member 1##AY359064|SCGB3A1|92304|secretoglobin, family 3A, member 1##AB033020|CNOT6|57472|CCR4-NOT transcription complex, subunit 6##BC152469|CNOT6|57472|CCR4-NOT transcription complex, subunit 6##NM_015455|CNOT6|57472|CCR4-NOT transcription complex, subunit 6##EU826564|FLT4|2324|fms-related tyrosine kinase 4##EU826565|FLT4|2324|fms-related tyrosine kinase 4##EU826566|FLT4|2324|fms-related tyrosine kinase 4##X68203|FLT4|2324|fms-related tyrosine kinase 4##AY233382|FLT4|2324|fms-related tyrosine kinase 4##AY233383|FLT4|2324|fms-related tyrosine kinase 4##X69878|FLT4|2324|fms-related tyrosine kinase 4##U43143|FLT4|2324|fms-related tyrosine kinase 4##AK291679|FLT4|2324|fms-related tyrosine kinase 4##AK309910|FLT4|2324|fms-related tyrosine kinase 4	0.950962	CTCF.p2:8:0.951
chr7	92250444	92250571	reg1008834.p1	10.910	+	TSC_hg19_v1_chr7_-_92219705 BC079834 BC090868 BC057771 AK125498 AL833918 BC017874 NM_001040057 NM_152789 BC062706	-30809	-	TSC_hg19_v1_chr7_-_92219660 BC032461 BC157872	-30865	-	BC104865 BC104867 BC143576 NM_032120 CR933641 BC044570 AL136619 BC020919 BC033561 CR936726 AK294626 AK294812 AF161422 BC065716 CR533549	-92401	+	AB528631 CU690894 X66365 TSC_hg19_v1_chr7_-_92462894	212260	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	212713	-	AK313491 TSC_hg19_v1_chr7_-_92465884	215391	-	BC090868|FAM133B|257415|family with sequence similarity 133, member B##BC057771|FAM133B|257415|family with sequence similarity 133, member B##AK125498|FAM133B|257415|family with sequence similarity 133, member B##AL833918|FAM133B|257415|family with sequence similarity 133, member B##BC017874|FAM133B|257415|family with sequence similarity 133, member B##NM_001040057|FAM133B|257415|family with sequence similarity 133, member B##NM_152789|FAM133B|257415|family with sequence similarity 133, member B##BC062706|FAM133B|257415|family with sequence similarity 133, member B##BC032461|FAM133B|257415|family with sequence similarity 133, member B##BC157872|FAM133B|257415|family with sequence similarity 133, member B##BC104865|RBM48|84060|RNA binding motif protein 48##BC104867|RBM48|84060|RNA binding motif protein 48##BC143576|RBM48|84060|RNA binding motif protein 48##NM_032120|RBM48|84060|RNA binding motif protein 48##CR933641|RBM48|84060|RNA binding motif protein 48##BC044570|RBM48|84060|RNA binding motif protein 48##AL136619|RBM48|84060|RNA binding motif protein 48##BC020919|RBM48|84060|RNA binding motif protein 48##BC033561|RBM48|84060|RNA binding motif protein 48##CR936726|RBM48|84060|RNA binding motif protein 48##AK294626|RBM48|84060|RNA binding motif protein 48##AK294812|RBM48|84060|RNA binding motif protein 48##AF161422|RBM48|84060|RNA binding motif protein 48##BC065716|RBM48|84060|RNA binding motif protein 48##CR533549|RBM48|84060|RNA binding motif protein 48##X66365|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6	0.0	
chr15	33248310	33248435	reg1009435.p1	10.909	+	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-237206	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-238115	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	-314458	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	111863	-	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	354797	+	TSC_hg19_v1_chr15_-_34212524 BC037796	964186	-	AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3	0.905432	CTCF.p2:12:0.905
chr17	18044654	18044801	reg1012011.p1	10.908	+	AF144094 NM_016239	-32708	+	TSC_hg19_v1_chr17_+_17991289 AK313362 BC062572 BC000493 NM_001388 AK297569 X80754 AK295575 DQ890768 DQ893929 BT006976	-53459	+	TSC_hg19_v1_chr17_+_17942750 BC041829 NM_024052 AK315083 AK074284 AK127580 BC000636	-101920	+	TSC_hg19_v1_chr17_+_18086815 NM_017758	42112	+	TSC_hg19_v1_chr17_+_18087141 AK301107 BC062339	42462	+	TSC_hg19_v1_chr17_+_18128931 BC028037 NM_004140 BC151838 BC028214 X86371	84211	+	AF144094|MYO15A|51168|myosin XVA##NM_016239|MYO15A|51168|myosin XVA##AK313362|DRG2|1819|developmentally regulated GTP binding protein 2##BC062572|DRG2|1819|developmentally regulated GTP binding protein 2##BC000493|DRG2|1819|developmentally regulated GTP binding protein 2##NM_001388|DRG2|1819|developmentally regulated GTP binding protein 2##AK297569|DRG2|1819|developmentally regulated GTP binding protein 2##X80754|DRG2|1819|developmentally regulated GTP binding protein 2##AK295575|DRG2|1819|developmentally regulated GTP binding protein 2##DQ890768|DRG2|1819|developmentally regulated GTP binding protein 2##DQ893929|DRG2|1819|developmentally regulated GTP binding protein 2##BT006976|DRG2|1819|developmentally regulated GTP binding protein 2##BC041829|C17orf39|79018|chromosome 17 open reading frame 39##NM_024052|C17orf39|79018|chromosome 17 open reading frame 39##AK315083|C17orf39|79018|chromosome 17 open reading frame 39##AK074284|C17orf39|79018|chromosome 17 open reading frame 39##AK127580|C17orf39|79018|chromosome 17 open reading frame 39##BC000636|C17orf39|79018|chromosome 17 open reading frame 39##NM_017758|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##AK301107|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##BC062339|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##BC028037|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##NM_004140|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##BC151838|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##BC028214|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##X86371|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	0.999325	CTCF.p2:4:0.999
chr19	10111021	10111129	reg1007796.p1	10.908	+	TSC_hg19_v1_chr19_-_10047187 CU679906 DQ891083 DQ894265 AF131839 BC011361 NM_058164	-63951	-	BC031971 TSC_hg19_v1_chr19_+_9946188	-164911	+	NM_006221 TSC_hg19_v1_chr19_+_9946010 AK097558 AK291074 BC002899 U49070 AF086512 AB385559 BT019331 CR407654 CU678280 DQ892978 DQ896226	-165124	+	TSC_hg19_v1_chr19_-_10121181 AF177941 NM_015719	10068	-	DQ426888 AF229845 NM_015725	12817	+	TSC_hg19_v1_chr19_+_10196791 NM_018381	85711	+	DQ891083|OLFM2|93145|olfactomedin 2##DQ894265|OLFM2|93145|olfactomedin 2##AF131839|OLFM2|93145|olfactomedin 2##BC011361|OLFM2|93145|olfactomedin 2##NM_058164|OLFM2|93145|olfactomedin 2##BC031971|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##NM_006221|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK097558|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK291074|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##BC002899|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##U49070|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AF086512|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##BT019331|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##CR407654|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##DQ892978|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##DQ896226|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AF177941|COL5A3|50509|collagen, type V, alpha 3##NM_015719|COL5A3|50509|collagen, type V, alpha 3##AF229845|RDH8|50700|retinol dehydrogenase 8 (all-trans)##NM_015725|RDH8|50700|retinol dehydrogenase 8 (all-trans)##NM_018381|C19orf66|55337|chromosome 19 open reading frame 66	0.962948	CTCF.p2:18:0.963
chr2	96930677	96930820	reg1011990.p1	10.908	+	BC101730 BC101732 NM_001037228	-24772	+	TSC_hg19_v1_chr2_-_96874588 NM_020151	-56150	-	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	-56214	-	TSC_hg19_v1_chr2_-_96931700 BC039892	939	-	TSC_hg19_v1_chr2_-_96931736 AX775835 BC028575 AK000514 AK293276	981	-	TSC_hg19_v1_chr2_-_96931748 NM_001193304 NM_017849	1007	-	BC101730|LOC285033|285033|uncharacterized LOC285033##BC101732|LOC285033|285033|uncharacterized LOC285033##NM_001037228|LOC285033|285033|uncharacterized LOC285033##NM_020151|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC039892|TMEM127|55654|transmembrane protein 127##BC028575|TMEM127|55654|transmembrane protein 127##AK000514|TMEM127|55654|transmembrane protein 127##AK293276|TMEM127|55654|transmembrane protein 127##NM_001193304|TMEM127|55654|transmembrane protein 127##NM_017849|TMEM127|55654|transmembrane protein 127	0.974315	CTCF.p2:-7:0.974
chr6	166795410	166795526	reg1009694.p1	10.908	+	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	-39434	-	BC018969 NM_145169 TSC_hg19_v1_chr6_-_166756020	-39461	-	BC034775 NM_175922 TSC_hg19_v1_chr6_-_166721880	-73592	-	CU674406 TSC_hg19_v1_chr6_-_166796429 BC000810 AK312201 AK310934	941	-	TSC_hg19_v1_chr6_-_166796469 AF125101 AF151887 NM_016098	1042	-	DQ891864 DQ895053 L07598 TSC_hg19_v1_chr6_-_167040629	245109	-	AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1##BC018969|SFT2D1|113402|SFT2 domain containing 1##NM_145169|SFT2D1|113402|SFT2 domain containing 1##BC034775|PRR18|285800|proline rich 18##NM_175922|PRR18|285800|proline rich 18##BC000810|BRP44L|51660|brain protein 44-like##AK312201|BRP44L|51660|brain protein 44-like##AF125101|BRP44L|51660|brain protein 44-like##AF151887|BRP44L|51660|brain protein 44-like##NM_016098|BRP44L|51660|brain protein 44-like##DQ891864|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##DQ895053|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##L07598|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	0.144134	
chr8	7544283	7544389	reg1010965.p1	10.908	+	NM_001136572	-104162	-	NM_001136572	-127103	-	DQ119826 NM_001037668 NM_001040705 BC137510 BC137513 AF540979 AY122467	-190919	+	NM_001164452 NM_001164456	28628	+	NM_001164449 NM_001164451	36276	+	NM_001164450	51572	+	NM_001136572|FAM90A7|441317|family with sequence similarity 90, member A7##NM_001136572|FAM90A7|441317|family with sequence similarity 90, member A7##DQ119826|DEFB107A|245910|defensin, beta 107A##NM_001037668|DEFB107A|245910|defensin, beta 107A##NM_001040705|DEFB107B|503614|defensin, beta 107B##BC137510|DEFB107A|245910|defensin, beta 107A##BC137513|DEFB107A|245910|defensin, beta 107A##AF540979|DEFB107A|245910|defensin, beta 107A##AY122467|DEFB107A|245910|defensin, beta 107A##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164449|FAM90A19|728753|family with sequence similarity 90, member A19##NM_001164451|FAM90A18|441326|family with sequence similarity 90, member A18##NM_001164450|FAM90A8|441324|family with sequence similarity 90, member A8	0.999491	CTCF.p2:3:0.999
chr11	48131546	48131707	reg1010603.p2	10.907	+	TSC_hg19_v1_chr11_+_48002270 AL359057 BC063417	-129267	+	D37781 TSC_hg19_v1_chr11_+_48002120	-129506	+	TSC_hg19_v1_chr11_+_48002110 NM_001098503 NM_002843 U10886	-129535	+	NM_001005470	106735	+	BC136935 BC136936 NM_001004727	135005	+	NM_001004726	153786	+	AL359057|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##BC063417|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##D37781|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_001098503|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_002843|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##U10886|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_001005470|OR4B1|119765|olfactory receptor, family 4, subfamily B, member 1##BC136935|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##BC136936|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##NM_001004727|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##NM_001004726|OR4X1|390113|olfactory receptor, family 4, subfamily X, member 1	0.963305	CTCF.p2:50:0.963
chr12	56617859	56617989	reg1002774.p1	10.907	+	TSC_hg19_v1_chr12_-_56615718 BC024284 AK300752 NM_005785 NM_194358 AK314811 AK304576 NM_194359	-2199	-	NM_001242826 BC011626 BC095418 TSC_hg19_v1_chr12_-_56615651 BC036267	-2352	-	TSC_hg19_v1_chr12_-_56583357 AB209006 NM_001130420 NM_003075 NM_139067	-34577	-	TSC_hg19_v1_chr12_+_56618125 NM_024068	199	+	BC006171 TSC_hg19_v1_chr12_+_56618157 AY203942	285	+	NM_173596 TSC_hg19_v1_chr12_+_56623836 AK298331 AK313188	5913	+	BC024284|RNF41|10193|ring finger protein 41##AK300752|RNF41|10193|ring finger protein 41##NM_005785|RNF41|10193|ring finger protein 41##NM_194358|RNF41|10193|ring finger protein 41##AK314811|RNF41|10193|ring finger protein 41##AK304576|RNF41|10193|ring finger protein 41##NM_194359|RNF41|10193|ring finger protein 41##NM_001242826|RNF41|10193|ring finger protein 41##BC011626|RNF41|10193|ring finger protein 41##BC095418|RNF41|10193|ring finger protein 41##BC036267|RNF41|10193|ring finger protein 41##AB209006|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_001130420|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_003075|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_139067|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_024068|OBFC2B|79035|oligonucleotide/oligosaccharide-binding fold containing 2B##BC006171|OBFC2B|79035|oligonucleotide/oligosaccharide-binding fold containing 2B##AY203942|OBFC2B|79035|oligonucleotide/oligosaccharide-binding fold containing 2B##NM_173596|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##AK298331|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##AK313188|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5	0.696604	CTCF.p2:9:0.697
chr7	12564590	12564722	reg1005760.p1	10.907	+	NM_001135924	-120805	-	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	-121124	-	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	-313731	+	AB067492 NM_001112706 AK290363 AK075123 TSC_hg19_v1_chr7_+_12610346 BC021090 AB590413 DQ892033 DQ895224 AF276507	45651	+	AK027778 NM_033128	64491	+	TSC_hg19_v1_chr7_+_12726499 NM_001037164 NM_212460 BC039123 BC001111 BC003027	161830	+	NM_001135924|VWDE|221806|von Willebrand factor D and EGF domains##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains##NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AB067492|SCIN|85477|scinderin##NM_001112706|SCIN|85477|scinderin##AK290363|SCIN|85477|scinderin##AK075123|SCIN|85477|scinderin##BC021090|SCIN|85477|scinderin##DQ892033|SCIN|85477|scinderin##DQ895224|SCIN|85477|scinderin##AF276507|SCIN|85477|scinderin##AK027778|SCIN|85477|scinderin##NM_033128|SCIN|85477|scinderin##NM_001037164|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_212460|ARL4A|10124|ADP-ribosylation factor-like 4A##BC039123|ARL4A|10124|ADP-ribosylation factor-like 4A##BC001111|ARL4A|10124|ADP-ribosylation factor-like 4A##BC003027|ARL4A|10124|ADP-ribosylation factor-like 4A	0.990459	CTCF.p2:-43:0.990
chr16	88991765	88991870	reg1009707.p1	10.906	+	AB528852 EU190484 BC130001 BC130002 NM_001080487	-58776	-	TSC_hg19_v1_chr16_+_88923536 NM_016209 AF089106 AX771012 AK311885 BC105809 AK126779 AF161524 AK310805 AX771013 BC018024 AX771014 BC011369	-68294	+	AK294390 TSC_hg19_v1_chr16_-_88923352 AK312655 BC056151 BC050684 NM_000512 BC018027	-68447	-	AB010420 NM_175931	15789	-	AB527670 EU446890 BC047019 AK314766 AB010419 BC062624 NM_005187 TSC_hg19_v1_chr16_-_89043569	51586	-	TSC_hg19_v1_chr16_-_89119364 AK055272	127552	-	EU190484|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130001|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130002|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001080487|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_016209|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF089106|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771012|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK311885|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC105809|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK126779|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF161524|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK310805|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771013|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC018024|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771014|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC011369|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK294390|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK312655|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC056151|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC050684|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##NM_000512|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC018027|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##EU446890|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC047019|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AK314766|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010419|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC062624|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_005187|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	0.088335	
chr2	44105162	44105274	reg1008913.p1	10.906	+	AF324494 NM_022437 BC113657 BC143564 HQ258492 AF320294	-39071	+	BC111541 BC111542 AF320293 AF312715 NM_022436 AK091997 AX747300	-39273	-	AK223432 NM_001193464 NM_015522 NM_016008 AK074206 AK301489 BC016324 TSC_hg19_v1_chr2_+_44001199 BC040558 BC058823 AF151818 AY083346 BC006969	-104020	+	TSC_hg19_v1_chr2_-_44223096 BC050311	117849	-	AK299869 TSC_hg19_v1_chr2_-_44223114 AK125781 AK290016 AK308348	117895	-	BC026034 TSC_hg19_v1_chr2_-_44223116	117900	-	AF324494|ABCG8|64241|ATP-binding cassette, sub-family G (WHITE), member 8##NM_022437|ABCG8|64241|ATP-binding cassette, sub-family G (WHITE), member 8##BC113657|ABCG8|64241|ATP-binding cassette, sub-family G (WHITE), member 8##BC143564|ABCG8|64241|ATP-binding cassette, sub-family G (WHITE), member 8##HQ258492|ABCG8|64241|ATP-binding cassette, sub-family G (WHITE), member 8##AF320294|ABCG8|64241|ATP-binding cassette, sub-family G (WHITE), member 8##BC111541|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5##BC111542|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5##AF320293|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5##AF312715|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5##NM_022436|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5##AK091997|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5##AK223432|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##NM_001193464|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##NM_015522|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##NM_016008|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##AK074206|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##AK301489|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##BC016324|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##BC040558|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##BC058823|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##AF151818|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##AY083346|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##BC006969|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##BC050311|LRPPRC|10128|leucine-rich PPR-motif containing##AK299869|LRPPRC|10128|leucine-rich PPR-motif containing##AK125781|LRPPRC|10128|leucine-rich PPR-motif containing##AK290016|LRPPRC|10128|leucine-rich PPR-motif containing##AK308348|LRPPRC|10128|leucine-rich PPR-motif containing##BC026034|LRPPRC|10128|leucine-rich PPR-motif containing	0.945925	CTCF.p2:-5:0.946
chr8	11801266	11801380	reg1010963.p1	10.906	+	TSC_hg19_v1_chr8_-_11725628 NM_001908 NM_147780 NM_147781 NM_147782 NM_147783	-75625	-	TSC_hg19_v1_chr8_-_11725624 AK075393	-75699	-	AK092070 AK130184 AK290239 AK297687 BC095408 TSC_hg19_v1_chr8_-_11725597 AK296845 BX647952	-75726	-	AY621333 DQ012026 NM_001033018	30784	-	AY621332 DQ012025 NM_001033017	38506	+	AY621331 DQ012024 NM_001033019 BC130461 BC130463	52466	-	NM_001908|CTSB|1508|cathepsin B##NM_147780|CTSB|1508|cathepsin B##NM_147781|CTSB|1508|cathepsin B##NM_147782|CTSB|1508|cathepsin B##NM_147783|CTSB|1508|cathepsin B##AK075393|CTSB|1508|cathepsin B##AK092070|CTSB|1508|cathepsin B##AK130184|CTSB|1508|cathepsin B##AK290239|CTSB|1508|cathepsin B##AK297687|CTSB|1508|cathepsin B##BC095408|CTSB|1508|cathepsin B##AK296845|CTSB|1508|cathepsin B##BX647952|CTSB|1508|cathepsin B##AY621333|DEFB136|613210|defensin, beta 136##DQ012026|DEFB136|613210|defensin, beta 136##NM_001033018|DEFB136|613210|defensin, beta 136##AY621332|DEFB135|613209|defensin, beta 135##DQ012025|DEFB135|613209|defensin, beta 135##NM_001033017|DEFB135|613209|defensin, beta 135##AY621331|DEFB134|613211|defensin, beta 134##DQ012024|DEFB134|613211|defensin, beta 134##NM_001033019|DEFB134|613211|defensin, beta 134##BC130461|DEFB134|613211|defensin, beta 134##BC130463|DEFB134|613211|defensin, beta 134	0.675195	CTCF.p2:18:0.675
chr9	37747295	37747414	reg1010005.p1	10.906	+	TSC_hg19_v1_chr9_+_37650996 AB023184 NM_014907 BC114965	-96320	+	TSC_hg19_v1_chr9_-_37592575 BC029423 NM_001001790 NM_001134484 NM_001134485	-154749	-	CR627326 AB435233 TSC_hg19_v1_chr9_-_37592574 BC034247	-154835	-	TSC_hg19_v1_chr9_+_37753801 AK056017 NM_144964	6431	+	AK294219 TSC_hg19_v1_chr9_+_37753812 AK304516 AK092718 AK295733 AK315922 AX747687 BC057774 BC012175	6472	+	AF229833 TSC_hg19_v1_chr9_-_37784905	37491	-	AB023184|FRMPD1|22844|FERM and PDZ domain containing 1##NM_014907|FRMPD1|22844|FERM and PDZ domain containing 1##BC114965|FRMPD1|22844|FERM and PDZ domain containing 1##BC029423|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001001790|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134484|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134485|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##AB435233|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC034247|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##AK056017|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##NM_144964|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##AK294219|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##AK304516|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##AK092718|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##AK295733|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##AK315922|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##BC057774|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##BC012175|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##AF229833|EXOSC3|51010|exosome component 3	0.999165	CTCF.p2:-7:0.999
chr15	77478994	77479125	reg1009931.p1	10.905	+	AK091802 AX747193 TSC_hg19_v1_chr15_-_77472798	-6331	-	TSC_hg19_v1_chr15_-_77363522 NM_001168412 NM_005724 NM_198902	-115515	-	TSC_hg19_v1_chr15_-_77363454 BC011206 BC000704 AK001326	-115576	-	TSC_hg19_v1_chr15_-_77712437 NM_024776	233484	-	TSC_hg19_v1_chr15_+_77713043 AK297449 AK311376	233972	+	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	234203	+	AK091802|PEAK1|79834|NKF3 kinase family member##NM_001168412|TSPAN3|10099|tetraspanin 3##NM_005724|TSPAN3|10099|tetraspanin 3##NM_198902|TSPAN3|10099|tetraspanin 3##BC011206|TSPAN3|10099|tetraspanin 3##BC000704|TSPAN3|10099|tetraspanin 3##AK001326|TSPAN3|10099|tetraspanin 3##NM_024776|PEAK1|79834|NKF3 kinase family member##AK297449|HMG20A|10363|high mobility group 20A##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A	0.230291	CTCF.p2:-30:0.230
chr1	21023047	21023175	reg1009277.p1	10.904	+	TSC_hg19_v1_chr1_-_20988023 NM_005216	-35082	-	TSC_hg19_v1_chr1_-_20987997 D29643 AK315633	-35109	-	TSC_hg19_v1_chr1_-_20987960 AK297009	-35144	-	AB463089 BC065927 AB290162 NM_001122819 NM_020816	21148	-	AK296431 TSC_hg19_v1_chr1_-_21058714	35596	-	AK124869 NM_001103160 NM_001103161	36021	-	NM_005216|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase##D29643|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase##AK315633|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase##AK297009|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase##BC065927|KIF17|57576|kinesin family member 17##AB290162|KIF17|57576|kinesin family member 17##NM_001122819|KIF17|57576|kinesin family member 17##NM_020816|KIF17|57576|kinesin family member 17##AK296431|SH2D5|400745|SH2 domain containing 5##AK124869|SH2D5|400745|SH2 domain containing 5##NM_001103160|SH2D5|400745|SH2 domain containing 5##NM_001103161|SH2D5|400745|SH2 domain containing 5	1.03842	CTCF.p2:-15:0.999
chr21	37961775	37961925	reg1012349.p1	10.904	+	AJ566766 NM_001146077	-12984	-	AJ566765 NM_001146078	-46953	-	AF314090 AY355348 NM_001146079 NM_144492	-109463	-	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	109590	+	NM_005069 NM_009586 BC110444	110155	+	TSC_hg19_v1_chr21_-_38338991 AK307940 NM_001242784	377009	-	AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14##AJ566765|CLDN14|23562|claudin 14##NM_001146078|CLDN14|23562|claudin 14##AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14##NM_005069|SIM2|6493|single-minded homolog 2 (Drosophila)##NM_009586|SIM2|6493|single-minded homolog 2 (Drosophila)##BC110444|SIM2|6493|single-minded homolog 2 (Drosophila)##AK307940|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_001242784|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)	0.912178	CTCF.p2:16:0.912
chr1	176850257	176850377	reg1009406.p1	10.903	+	AF342989 AF342990 BC062665 BC104644 NM_020318 NM_021936 BC152552	-418005	+	AF527539 TSC_hg19_v1_chr1_-_176176377	-673941	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	-673948	-	BC142697 AB006627 BC146795 TSC_hg19_v1_chr1_-_177133827	283508	-	AK307820 AK295126 BC032870 BC049377 TSC_hg19_v1_chr1_-_177134004 NM_004319 NM_207108	283669	-	TSC_hg19_v1_chr1_-_177134042 AK309094	283758	-	AF342989|PAPPA2|60676|pappalysin 2##AF342990|PAPPA2|60676|pappalysin 2##BC062665|PAPPA2|60676|pappalysin 2##BC104644|PAPPA2|60676|pappalysin 2##NM_020318|PAPPA2|60676|pappalysin 2##NM_021936|PAPPA2|60676|pappalysin 2##BC152552|PAPPA2|60676|pappalysin 2##AF527539|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2##BC142697|ASTN1|460|astrotactin 1##AB006627|ASTN1|460|astrotactin 1##BC146795|ASTN1|460|astrotactin 1##AK307820|ASTN1|460|astrotactin 1##AK295126|ASTN1|460|astrotactin 1##BC032870|ASTN1|460|astrotactin 1##BC049377|ASTN1|460|astrotactin 1##NM_004319|ASTN1|460|astrotactin 1##NM_207108|ASTN1|460|astrotactin 1##AK309094|ASTN1|460|astrotactin 1	0.999368	CTCF.p2:1:0.999
chr6_ssto_hap7	2668530	2668644	reg1010990.p1	10.903	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.012206	CTCF.p2:20:1.000
chr2	189234209	189234338	reg1010533.p1	10.902	+	TSC_hg19_v1_chr2_+_189157557 BC068525 AF191771 AF200715 AF075014	-76692	+	TSC_hg19_v1_chr2_+_189156740 AK298626	-77525	+	TSC_hg19_v1_chr2_+_189156656 BC001103	-77611	+	AY039011 NM_052952	420557	-	TSC_hg19_v1_chr2_+_189839098 AK308010 NM_000090 BC028178	604821	+	X14420 BX649097 TSC_hg19_v1_chr2_+_189839117	604845	+	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AK298626|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##BC001103|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AY039011|DIRC1|116093|disrupted in renal carcinoma 1##NM_052952|DIRC1|116093|disrupted in renal carcinoma 1##AK308010|COL3A1|1281|collagen, type III, alpha 1##NM_000090|COL3A1|1281|collagen, type III, alpha 1##BC028178|COL3A1|1281|collagen, type III, alpha 1##X14420|COL3A1|1281|collagen, type III, alpha 1	0.968023	CTCF.p2:12:0.968
chr3	53384826	53384932	reg1010792.p1	10.902	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	-3286	-	TSC_hg19_v1_chr3_-_53290099 NM_001064 NM_001135055	-94765	-	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	-94868	-	TSC_hg19_v1_chr3_+_53528709 M76558	143780	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	144232	+	TSC_hg19_v1_chr3_-_53880427 NM_018397	495540	-	DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_001064|TKT|7086|transketolase##NM_001135055|TKT|7086|transketolase##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_018397|CHDH|55349|choline dehydrogenase	0.062282	
chr8	117460236	117460350	reg1008715.p1	10.901	+	TSC_hg19_v1_chr8_-_116681365 AF183810	-778958	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	-779128	-	TSC_hg19_v1_chr8_-_116680208 AK304046	-780073	-	TSC_hg19_v1_chr8_-_117768041 BC000386 BT019594 CR456906 CU674186 AK222620 U54559 BC090880	307744	-	AK222520 TSC_hg19_v1_chr8_-_117768063 AK296162 NM_003756	307778	-	BC005955 BC022441 NM_032334 TSC_hg19_v1_chr8_+_117778752	318458	+	AF183810|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC000386|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BT019594|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##CR456906|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222620|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##U54559|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC090880|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222520|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK296162|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##NM_003756|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC005955|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC022441|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##NM_032334|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)	0.0	
chr14	100539127	100539295	reg1008612.p1	10.900	+	TSC_hg19_v1_chr14_+_100531768 AF087843 BC032358 AF052504	-7416	+	TSC_hg19_v1_chr14_+_100531758 NM_016337 AK301379	-7459	+	AK295919 TSC_hg19_v1_chr14_+_100485800	-53452	+	AF131766 TSC_hg19_v1_chr14_+_100563847	24622	+	AY541700 BC063598 TSC_hg19_v1_chr14_-_100626009 NM_206918	86760	-	NM_003403 TSC_hg19_v1_chr14_+_100705177	165931	+	AF087843|EVL|51466|Enah/Vasp-like##BC032358|EVL|51466|Enah/Vasp-like##AF052504|EVL|51466|Enah/Vasp-like##NM_016337|EVL|51466|Enah/Vasp-like##AK301379|EVL|51466|Enah/Vasp-like##AK295919|EVL|51466|Enah/Vasp-like##AF131766|EVL|51466|Enah/Vasp-like##AY541700|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##BC063598|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##NM_206918|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##NM_003403|YY1|7528|YY1 transcription factor	0.243684	CTCF.p2:95:0.201
chr6	36391015	36391149	reg1010048.p1	10.900	+	AF175387 AF218365 AF116508 AF116509 AF116510 AF218235 AF218366 BC035853 AK301011 AF147782 AK223424 AJ276205 AK026144 NM_001207038 AK303829 NM_001207035 NM_001207036 NM_001207037 NM_001207039 NM_001207040 NM_001207041 NM_016135	-35623	-	BC140873 BX648558 NM_001010903 TSC_hg19_v1_chr6_-_36304663	-86457	-	AM182887 FJ457781 NM_001145717	-152846	+	BC031105 NM_152990	19583	-	AY305862 NM_173562 TSC_hg19_v1_chr6_+_36410797 AK295717 AK316456	19588	+	TSC_hg19_v1_chr6_+_36410807 BC023525 AK302861 AK304377	19750	+	AF175387|ETV7|51513|ets variant 7##AF218365|ETV7|51513|ets variant 7##AF116508|ETV7|51513|ets variant 7##AF116509|ETV7|51513|ets variant 7##AF116510|ETV7|51513|ets variant 7##AF218235|ETV7|51513|ets variant 7##AF218366|ETV7|51513|ets variant 7##BC035853|ETV7|51513|ets variant 7##AK301011|ETV7|51513|ets variant 7##AF147782|ETV7|51513|ets variant 7##AK223424|ETV7|51513|ets variant 7##AJ276205|ETV7|51513|ets variant 7##AK026144|ETV7|51513|ets variant 7##NM_001207038|ETV7|51513|ets variant 7##AK303829|ETV7|51513|ets variant 7##NM_001207035|ETV7|51513|ets variant 7##NM_001207036|ETV7|51513|ets variant 7##NM_001207037|ETV7|51513|ets variant 7##NM_001207039|ETV7|51513|ets variant 7##NM_001207040|ETV7|51513|ets variant 7##NM_001207041|ETV7|51513|ets variant 7##NM_016135|ETV7|51513|ets variant 7##BC140873|C6orf222|389384|chromosome 6 open reading frame 222##BX648558|C6orf222|389384|chromosome 6 open reading frame 222##NM_001010903|C6orf222|389384|chromosome 6 open reading frame 222##AM182887|PNPLA1|285848|patatin-like phospholipase domain containing 1##FJ457781|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145717|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC031105|PXT1|222659|peroxisomal, testis specific 1##NM_152990|PXT1|222659|peroxisomal, testis specific 1##AY305862|KCTD20|222658|potassium channel tetramerisation domain containing 20##NM_173562|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK295717|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK316456|KCTD20|222658|potassium channel tetramerisation domain containing 20##BC023525|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK302861|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK304377|KCTD20|222658|potassium channel tetramerisation domain containing 20	0.060698	
chr15	20989291	20989421	reg1009675.p2	10.899	+	NM_001145004	-242243	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-277919	-	None	None	None	NM_207355 BC066981	82622	-	NM_207355 BC066981	1093782	-	BC136985 NM_001004719	1379121	+	NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2	0.609846	CTCF.p2:13:0.610
chrX	100851170	100851321	reg1010927.p1	10.899	+	TSC_hg19_v1_chrX_+_100805532 AB039670 NM_016608 CR749609 AK222578 AK074785 BC002691 AF248963	-45744	+	TSC_hg19_v1_chrX_+_100663231 U01923	-187990	+	AK298133 TSC_hg19_v1_chrX_+_100663213	-188026	+	TSC_hg19_v1_chrX_-_100872931 BC007677 NM_001009584 NM_001184768 NM_019007	21713	-	TSC_hg19_v1_chrX_+_100878175 AK291225 NM_016607 NM_177947 BX647802 AF208859 AK222655 AB039669 BC005194 CR933656	26896	+	NM_177948	27105	+	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1##NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1##CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1##AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1##AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1##BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1##AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1##U01923|HNRNPH2|3188|heterogeneous nuclear ribonucleoprotein H2 (H')##AK298133|HNRNPH2|3188|heterogeneous nuclear ribonucleoprotein H2 (H')##BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6##NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6##NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6##NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6##AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3##BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3##AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3##AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3##BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3##CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_177948|ARMCX3|51566|armadillo repeat containing, X-linked 3	1.66629	CTCF.p2:-5:0.879	CTCF.p2:104:0.788
chr1	161162415	161162530	reg1008865.p1	10.898	+	NM_001199873 NM_001199874 NM_003779	-14715	-	AK056851 AF038661 BC000276 AF020921 BC006099 TSC_hg19_v1_chr1_-_161147285 BC009985 AK291455 AK092493 AK023311	-15205	-	NM_000309 NM_001122764 BC002357 D38537 U26446 AK094855 AK302298 AK298912	-26232	+	AB014588 AF148213 AY358886 BC063293 AK291573 BC030812 TSC_hg19_v1_chr1_-_161168845 NM_005099	6359	-	BC008868 NM_004550	6632	+	NM_001166159	9464	+	NM_001199873|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##NM_001199874|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##NM_003779|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AK056851|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AF038661|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##BC000276|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##BC006099|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##BC009985|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AK291455|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AK092493|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AK023311|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##NM_000309|PPOX|5498|protoporphyrinogen oxidase##NM_001122764|PPOX|5498|protoporphyrinogen oxidase##BC002357|PPOX|5498|protoporphyrinogen oxidase##D38537|PPOX|5498|protoporphyrinogen oxidase##U26446|PPOX|5498|protoporphyrinogen oxidase##AK094855|PPOX|5498|protoporphyrinogen oxidase##AK302298|PPOX|5498|protoporphyrinogen oxidase##AK298912|PPOX|5498|protoporphyrinogen oxidase##AB014588|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4##AF148213|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4##AY358886|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4##BC063293|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4##AK291573|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4##BC030812|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4##NM_005099|ADAMTS4|9507|ADAM metallopeptidase with thrombospondin type 1 motif, 4##BC008868|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##NM_004550|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##NM_001166159|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)	0.9606	CTCF.p2:2:0.961
chr20	6058131	6058244	reg1010226.p1	10.898	+	TSC_hg19_v1_chr20_-_6034626 AK290123 AK172833 BC027720 NM_152611	-23531	-	NM_001127458 AK310368	-70288	+	TSC_hg19_v1_chr20_+_5986970 AL832419	-71218	+	TSC_hg19_v1_chr20_-_6103678 AK314394 BC040545 AF443278	45487	-	BC035882 TSC_hg19_v1_chr20_-_6103891	45690	-	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	45976	-	AK290123|LRRN4|164312|leucine rich repeat neuronal 4##AK172833|LRRN4|164312|leucine rich repeat neuronal 4##BC027720|LRRN4|164312|leucine rich repeat neuronal 4##NM_152611|LRRN4|164312|leucine rich repeat neuronal 4##NM_001127458|CRLS1|54675|cardiolipin synthase 1##AK310368|CRLS1|54675|cardiolipin synthase 1##AL832419|CRLS1|54675|cardiolipin synthase 1##AK314394|FERMT1|55612|fermitin family member 1##BC040545|FERMT1|55612|fermitin family member 1##AF443278|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1	0.996216	CTCF.p2:-1:0.996
chr2	75326021	75326163	reg1011065.p1	10.898	+	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-140307	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-263841	-	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	-264832	+	AK289765 NM_001058 NM_015727	100536	-	BC016157 TSC_hg19_v1_chr2_-_75788066	461955	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	461998	-	NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2##AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A	0.222248	CTCF.p2:0:0.222
chr12	57151420	57151531	reg1007431.p1	10.897	+	AB528338 CU675073 EU176421 EU176762 TSC_hg19_v1_chr12_-_57146108 AK223391 AK314866 X74330 BC005266 NM_000946	-5349	-	TSC_hg19_v1_chr12_-_57119316 NM_001113202 NM_001113203	-32157	-	BC105120 BC105122 TSC_hg19_v1_chr12_-_57119084 BC106041 AF054187 AY605660 AY911673 X80909 AK311904 AK096699 AK223085 AK293209	-32433	-	AK313423 BC020710 NM_003725 TSC_hg19_v1_chr12_+_57157107 U89281 AF223225	5636	+	AY044434 BC101551 BC101553 AK122782 NM_148897	176641	-	AF057034 NM_003708	199924	-	EU176421|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##EU176762|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##AK223391|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##AK314866|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##X74330|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##BC005266|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##NM_000946|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit##NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC105120|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC105122|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC106041|NACA|4666|nascent polypeptide-associated complex alpha subunit##AF054187|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY605660|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY911673|NACA|4666|nascent polypeptide-associated complex alpha subunit##X80909|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK311904|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK096699|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK223085|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK293209|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK313423|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##BC020710|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##NM_003725|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##U89281|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##AF223225|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##AY044434|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC101551|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC101553|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##AK122782|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##NM_148897|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##AF057034|RDH16|8608|retinol dehydrogenase 16 (all-trans)##NM_003708|RDH16|8608|retinol dehydrogenase 16 (all-trans)	0.295462	CTCF.p2:-8:0.295
chr5	66452948	66453065	reg1009228.p1	10.897	+	AY830839 BC018692 NM_015183	-328403	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-560798	+	BC067770 NM_139168	-1012344	+	BC109069 BC109070 D83597 NM_005582 AK313177	39594	-	TSC_hg19_v1_chr5_+_67511583 NM_181523	1058574	+	TSC_hg19_v1_chr5_+_67511602 BC094795	1058601	+	AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC067770|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_139168|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.976479	CTCF.p2:-9:0.976
chr10	116546304	116546421	reg1009220.p1	10.896	+	TSC_hg19_v1_chr10_-_116528049 AK057834	-18354	-	TSC_hg19_v1_chr10_-_116444374 NM_001003407 NM_001003408	-101969	-	AB462929 TSC_hg19_v1_chr10_-_116444183 D31883	-102199	-	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	35187	+	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	151601	+	TSC_hg19_v1_chr10_+_116853123 BC029592 BC035157 NM_207303 BC139916 BC139923 BC047716	306786	+	AK057834|ABLIM1|3983|actin binding LIM protein 1##NM_001003407|ABLIM1|3983|actin binding LIM protein 1##NM_001003408|ABLIM1|3983|actin binding LIM protein 1##D31883|ABLIM1|3983|actin binding LIM protein 1##BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC029592|ATRNL1|26033|attractin-like 1##BC035157|ATRNL1|26033|attractin-like 1##NM_207303|ATRNL1|26033|attractin-like 1##BC139916|ATRNL1|26033|attractin-like 1##BC139923|ATRNL1|26033|attractin-like 1##BC047716|ATRNL1|26033|attractin-like 1	0.975737	CTCF.p2:9:0.976
chr15	77400148	77400270	reg1008794.p1	10.896	+	TSC_hg19_v1_chr15_-_77363522 NM_001168412 NM_005724 NM_198902	-36665	-	TSC_hg19_v1_chr15_-_77363454 BC011206 BC000704 AK001326	-36726	-	TSC_hg19_v1_chr15_-_77363389 AF054840 CU674348 AB529127 AF133423 AK293677 AK001310 AK001305 BC004280 BC009248 AK075336 AK075482 AK095520 AK298157	-36923	-	AK091802 AX747193 TSC_hg19_v1_chr15_-_77472798	72519	-	TSC_hg19_v1_chr15_-_77712437 NM_024776	312334	-	TSC_hg19_v1_chr15_+_77713043 AK297449 AK311376	312822	+	NM_001168412|TSPAN3|10099|tetraspanin 3##NM_005724|TSPAN3|10099|tetraspanin 3##NM_198902|TSPAN3|10099|tetraspanin 3##BC011206|TSPAN3|10099|tetraspanin 3##BC000704|TSPAN3|10099|tetraspanin 3##AK001326|TSPAN3|10099|tetraspanin 3##AF054840|TSPAN3|10099|tetraspanin 3##AF133423|TSPAN3|10099|tetraspanin 3##AK293677|TSPAN3|10099|tetraspanin 3##AK001310|TSPAN3|10099|tetraspanin 3##AK001305|TSPAN3|10099|tetraspanin 3##BC004280|TSPAN3|10099|tetraspanin 3##BC009248|TSPAN3|10099|tetraspanin 3##AK075336|TSPAN3|10099|tetraspanin 3##AK075482|TSPAN3|10099|tetraspanin 3##AK298157|TSPAN3|10099|tetraspanin 3##AK091802|PEAK1|79834|NKF3 kinase family member##NM_024776|PEAK1|79834|NKF3 kinase family member##AK297449|HMG20A|10363|high mobility group 20A	0.877314	CTCF.p2:-7:0.877
chr20	11254820	11254969	reg1011458.p1	10.896	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-600325	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	-600690	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-838918	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	616555	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	643663	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	1734747	+	BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3	0.761032	CTCF.p2:15:0.761
chr8	21924394	21924546	reg1011484.p1	10.896	+	TSC_hg19_v1_chr8_+_21924371 CU675345 DQ892779 DQ896026 EU832675 EU832755 BT007396	-93	+	AK055842 TSC_hg19_v1_chr8_+_21916865	-7605	+	NM_001114138 NM_001978 TSC_hg19_v1_chr8_+_21916727 L19713 U28389	-7761	+	TSC_hg19_v1_chr8_+_21946666 AK126408 NM_022749 BC052237	22208	+	TSC_hg19_v1_chr8_+_21946730 AK294646	22277	+	CU677759 AK026147 TSC_hg19_v1_chr8_-_21966936 BC016902 NM_024815	42418	-	DQ892779|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##DQ896026|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##EU832675|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##EU832755|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##BT007396|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##AK055842|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##NM_001114138|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##NM_001978|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##L19713|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##U28389|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##AK126408|FAM160B2|64760|family with sequence similarity 160, member B2##NM_022749|FAM160B2|64760|family with sequence similarity 160, member B2##BC052237|FAM160B2|64760|family with sequence similarity 160, member B2##AK294646|FAM160B2|64760|family with sequence similarity 160, member B2##AK026147|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##BC016902|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##NM_024815|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18	0.999898	CTCF.p2:5:1.000
chr22	27075124	27075240	reg1008149.p1	10.895	+	TSC_hg19_v1_chr22_+_27068725 AK026502	-6442	+	TSC_hg19_v1_chr22_+_27053392 AB263414 AB263415 AB263416 AB263417 AK098833	-21710	+	BC069404 CR456424 NM_001886 U59057 AB528112 CU012985 CU013273 BC096171 BC096172 BC096173 BC096174	-57251	+	TSC_hg19_v1_chr22_-_28197481 NM_002430 X82209	1122295	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	1239992	-	TSC_hg19_v1_chr22_-_28315203 BC031427	1240025	-	AK026502|LOC100507637|100507637|uncharacterized LOC100507637##AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##BC069404|CRYBA4|1413|crystallin, beta A4##CR456424|CRYBA4|1413|crystallin, beta A4##NM_001886|CRYBA4|1413|crystallin, beta A4##U59057|CRYBA4|1413|crystallin, beta A4##CU012985|CRYBA4|1413|crystallin, beta A4##CU013273|CRYBA4|1413|crystallin, beta A4##BC096171|CRYBA4|1413|crystallin, beta A4##BC096172|CRYBA4|1413|crystallin, beta A4##BC096173|CRYBA4|1413|crystallin, beta A4##BC096174|CRYBA4|1413|crystallin, beta A4##NM_002430|MN1|4330|meningioma (disrupted in balanced translocation) 1##X82209|MN1|4330|meningioma (disrupted in balanced translocation) 1##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta	0.857787	CTCF.p2:-9:0.858
chr8	79419928	79420035	reg1006902.p1	10.895	+	NM_001172086 NM_001172087	-1506702	-	BC000661 BC093043 TSC_hg19_v1_chr8_-_77912318 BC005375 M85038 AK312997 M86852 NM_000318 NM_001079867	-1507572	-	AK131399 TSC_hg19_v1_chr8_+_77765961	-1654092	+	NM_006823 NM_181839 S76965	8354	+	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	158339	+	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	297667	-	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2##NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2##BC000661|PEX2|5828|peroxisomal biogenesis factor 2##BC093043|PEX2|5828|peroxisomal biogenesis factor 2##BC005375|PEX2|5828|peroxisomal biogenesis factor 2##M85038|PEX2|5828|peroxisomal biogenesis factor 2##AK312997|PEX2|5828|peroxisomal biogenesis factor 2##M86852|PEX2|5828|peroxisomal biogenesis factor 2##NM_000318|PEX2|5828|peroxisomal biogenesis factor 2##NM_001079867|PEX2|5828|peroxisomal biogenesis factor 2##AK131399|ZFHX4|79776|zinc finger homeobox 4##NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7	0.906916	CTCF.p2:-22:0.907
chr8	9687061	9687165	reg1007625.p2	10.895	+	TSC_hg19_v1_chr8_+_9413439 BC023578 AF082556 NM_003747 AK301798	-273632	+	TSC_hg19_v1_chr8_+_9413423 AK302031	-273690	+	TSC_hg19_v1_chr8_+_9413421 BC098394	-273708	+	TSC_hg19_v1_chr8_+_9911765 AY958429	224656	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	224766	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	265950	+	BC023578|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AF082556|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##NM_003747|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK301798|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK302031|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##BC098394|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AY958429|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A	0.990656	CTCF.p2:14:0.991
chr12	79941752	79941875	reg1008895.p2	10.894	+	CR627387 NM_001135806 AK308743	-502362	+	TSC_hg19_v1_chr12_+_79258794 BC058917	-682996	+	TSC_hg19_v1_chr12_+_79258597 BC041373	-683221	+	AB590922 CR536549 BC007018 TSC_hg19_v1_chr12_-_80084318	142402	-	U63809 TSC_hg19_v1_chr12_-_80084784 NM_002583	142952	-	AK302692 NM_001143886	365877	-	CR627387|SYT1|6857|synaptotagmin I##NM_001135806|SYT1|6857|synaptotagmin I##AK308743|SYT1|6857|synaptotagmin I##BC058917|SYT1|6857|synaptotagmin I##BC041373|SYT1|6857|synaptotagmin I##CR536549|PAWR|5074|PRKC, apoptosis, WT1, regulator##BC007018|PAWR|5074|PRKC, apoptosis, WT1, regulator##U63809|PAWR|5074|PRKC, apoptosis, WT1, regulator##NM_002583|PAWR|5074|PRKC, apoptosis, WT1, regulator##AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	0.963185	CTCF.p2:-1:0.963
chr14	22843872	22843996	reg1011005.p1	10.894	+	AB463964 NM_001001912 AY726598	-710612	+	NM_001005466 AB529274 BC137371 BC137382	-740888	-	AB528817 NM_001005465	-805060	-	X58763 TSC_hg19_v1_chr14_+_22989364	145415	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	214152	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	214200	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.596032	CTCF.p2:1:0.547
chr17	6925394	6925538	reg1009309.p2	10.894	+	TSC_hg19_v1_chr17_+_6918100 AK295795 BC040036	-7359	+	NM_001142798 NM_001142799 NM_174893 TSC_hg19_v1_chr17_+_6918071 AK055800	-7398	+	TSC_hg19_v1_chr17_+_6915973 BC040148	-9491	+	TSC_hg19_v1_chr17_+_6926368 BC059404 NM_181844 AK293102 AK292878 AB076580	911	+	TSC_hg19_v1_chr17_+_6926416 AK122893	951	+	TSC_hg19_v1_chr17_+_6939347 BC142618 NM_201566	13919	+	AK295795|C17orf49|124944|chromosome 17 open reading frame 49##BC040036|C17orf49|124944|chromosome 17 open reading frame 49##NM_001142798|C17orf49|124944|chromosome 17 open reading frame 49##NM_001142799|C17orf49|124944|chromosome 17 open reading frame 49##NM_174893|C17orf49|124944|chromosome 17 open reading frame 49##AK055800|C17orf49|124944|chromosome 17 open reading frame 49##BC040148|RNASEK-C17ORF49|100529209|RNASEK-C17orf49 readthrough##BC059404|BCL6B|255877|B-cell CLL/lymphoma 6, member B##NM_181844|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AK293102|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AK292878|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AB076580|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AK122893|BCL6B|255877|B-cell CLL/lymphoma 6, member B##BC142618|SLC16A13|201232|solute carrier family 16, member 13 (monocarboxylic acid transporter 13)##NM_201566|SLC16A13|201232|solute carrier family 16, member 13 (monocarboxylic acid transporter 13)	0.972635	CTCF.p2:6:0.973
chr20	4573326	4573459	reg1011742.p1	10.894	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	-343802	-	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	-443869	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	-443957	+	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	93584	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	129142	+	AY154472 NM_170774	222376	-	L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	0.843184	CTCF.p2:7:0.843
chr7	25133953	25134078	reg1010157.p2	10.894	+	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	-114271	-	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-336418	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-336676	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	30862	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	30925	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	85856	-	AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31	0.064993	
chr9	98994827	98994935	reg1008717.p1	10.894	+	TSC_hg19_v1_chr9_-_98638262 AF194971 AL389954	-356558	-	NM_001010895 TSC_hg19_v1_chr9_+_98637942 AK129624 AK308409 AL389953	-356940	+	TSC_hg19_v1_chr9_-_98637839 AK092137 AX747374	-357028	-	BT019371 CR541894 CU689848 DQ891812 DQ894995 BC034281 NM_000197 U05659	69528	-	TSC_hg19_v1_chr9_-_99145966 HQ258608 AB106537 AB122077 AK307890 BC100278	151050	-	NM_007001 TSC_hg19_v1_chr9_-_99145994 BC113579	151139	-	AF194971|LINC00476|100128782|long intergenic non-protein coding RNA 476##AL389954|LINC00476|100128782|long intergenic non-protein coding RNA 476##NM_001010895|C9orf102|375748|chromosome 9 open reading frame 102##AK308409|C9orf102|375748|chromosome 9 open reading frame 102##AL389953|C9orf102|375748|chromosome 9 open reading frame 102##AK092137|LINC00476|100128782|long intergenic non-protein coding RNA 476##BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##HQ258608|SLC35D2|11046|solute carrier family 35, member D2##AB106537|SLC35D2|11046|solute carrier family 35, member D2##AB122077|SLC35D2|11046|solute carrier family 35, member D2##AK307890|SLC35D2|11046|solute carrier family 35, member D2##BC100278|SLC35D2|11046|solute carrier family 35, member D2##NM_007001|SLC35D2|11046|solute carrier family 35, member D2##BC113579|SLC35D2|11046|solute carrier family 35, member D2	0.215367	CTCF.p2:1:0.215
chr10	104594829	104594940	reg1010043.p1	10.893	+	TSC_hg19_v1_chr10_+_104590431 CU687687	-4440	+	NM_017787 TSC_hg19_v1_chr10_+_104535970 AY656171 AK056285 BC113857 BC114465	-58929	+	TSC_hg19_v1_chr10_+_104503740 AY656172	-91126	+	AK308466 BT020000 CU687686 BC062997 BC063388 BC032843 M14564 TSC_hg19_v1_chr10_-_104597171 AK289898 AK094106 AK312235 NM_000102	2300	-	NM_001136200 NM_144591 AL832477 TSC_hg19_v1_chr10_+_104614015 AK098071 BC015994 BC040069 AK311742	19117	+	NM_020682 AK057833 AK225972 AF226730 AK309737 BC119637 BC119638	34373	+	NM_017787|C10orf26|54838|chromosome 10 open reading frame 26##AY656171|C10orf26|54838|chromosome 10 open reading frame 26##AK056285|C10orf26|54838|chromosome 10 open reading frame 26##BC113857|C10orf26|54838|chromosome 10 open reading frame 26##BC114465|C10orf26|54838|chromosome 10 open reading frame 26##AY656172|C10orf26|54838|chromosome 10 open reading frame 26##AK308466|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BT020000|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC062997|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC063388|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC032843|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##M14564|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK289898|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK094106|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK312235|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##NM_000102|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32##NM_144591|C10orf32|119032|chromosome 10 open reading frame 32##AL832477|C10orf32|119032|chromosome 10 open reading frame 32##AK098071|C10orf32|119032|chromosome 10 open reading frame 32##BC015994|C10orf32|119032|chromosome 10 open reading frame 32##BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT readthrough##AK311742|C10orf32|119032|chromosome 10 open reading frame 32##NM_020682|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK057833|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK225972|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AF226730|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK309737|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119637|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119638|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase	0.999913	CTCF.p2:-4:1.000
chr1	231053132	231053259	reg1008464.p1	10.893	+	AK096166 NM_001136494	-47861	-	TSC_hg19_v1_chr1_-_231004271 AK027431 BC066649 NM_032800	-48929	-	AL713769 TSC_hg19_v1_chr1_-_231004090	-49125	-	TSC_hg19_v1_chr1_-_231114585 BC110880 AK075386 AK075561	61392	-	TSC_hg19_v1_chr1_-_231114598 BC047662	61405	-	AK309725 TSC_hg19_v1_chr1_-_231114608	61414	-	AK096166|C1orf198|84886|chromosome 1 open reading frame 198##NM_001136494|C1orf198|84886|chromosome 1 open reading frame 198##AK027431|C1orf198|84886|chromosome 1 open reading frame 198##BC066649|C1orf198|84886|chromosome 1 open reading frame 198##NM_032800|C1orf198|84886|chromosome 1 open reading frame 198##AL713769|C1orf198|84886|chromosome 1 open reading frame 198##BC110880|TTC13|79573|tetratricopeptide repeat domain 13##AK075386|TTC13|79573|tetratricopeptide repeat domain 13##AK075561|TTC13|79573|tetratricopeptide repeat domain 13##BC047662|TTC13|79573|tetratricopeptide repeat domain 13##AK309725|TTC13|79573|tetratricopeptide repeat domain 13	0.994044	CTCF.p2:-27:0.994
chr2	226147717	226147839	reg1010622.p1	10.893	+	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	-240430	-	TSC_hg19_v1_chr2_-_225811768 EU236710	-336024	-	TSC_hg19_v1_chr2_-_225450116 NM_003590	-697658	-	NM_020864 BC131727 AB040919	117867	+	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	1515701	-	TSC_hg19_v1_chr2_-_227664534 S62539	1516721	-	AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##EU236710|DOCK10|55619|dedicator of cytokinesis 10##NM_003590|CUL3|8452|cullin 3##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##S62539|IRS1|3667|insulin receptor substrate 1	0.956062	CTCF.p2:-2:0.892
chr11	96127051	96127181	reg1010536.p1	10.892	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-3942	+	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	-4074	-	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	-50713	-	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	2764633	+	AB013802 AB013803 NM_175566	3299757	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	4431012	+	AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42	0.997492	CTCF.p2:5:0.997
chr7	100289405	100289521	reg1008891.p2	10.892	+	NM_022574	-2594	-	TSC_hg19_v1_chr7_+_100273776 M36429 AB528576 CU679597 AF501883 CR541729	-15631	+	M16538 TSC_hg19_v1_chr7_+_100271486 AK291592	-17969	+	TSC_hg19_v1_chr7_+_100303755 NM_005837 BC001430 U94316	14257	+	NM_000799 X02157 BC093628 BC111937 BC143225 AB463610 JN849371	29049	+	AF332975 AF332976 AF332977 AF332978 AF332979 AF332980 NM_003386 NM_173059	41785	+	NM_022574|GIGYF1|64599|GRB10 interacting GYF protein 1##M36429|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##AF501883|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##CR541729|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##M16538|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##AK291592|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##NM_005837|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##BC001430|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##U94316|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##NM_000799|EPO|2056|erythropoietin##X02157|EPO|2056|erythropoietin##BC093628|EPO|2056|erythropoietin##BC111937|EPO|2056|erythropoietin##BC143225|EPO|2056|erythropoietin##JN849371|EPO|2056|erythropoietin##AF332975|ZAN|7455|zonadhesin##AF332976|ZAN|7455|zonadhesin##AF332977|ZAN|7455|zonadhesin##AF332978|ZAN|7455|zonadhesin##AF332979|ZAN|7455|zonadhesin##AF332980|ZAN|7455|zonadhesin##NM_003386|ZAN|7455|zonadhesin##NM_173059|ZAN|7455|zonadhesin	0.989929	CTCF.p2:-7:0.990
chr8	65831125	65831242	reg1009115.p2	10.892	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	-119904	-	TSC_hg19_v1_chr8_+_65493611 AK091333	-337519	+	NM_152414 AK293979	-338325	+	TSC_hg19_v1_chr8_-_66546394 AK001373	715212	-	TSC_hg19_v1_chr8_-_66546404 AK304463	715223	-	TSC_hg19_v1_chr8_-_66546413 BC011607 BC018846 NM_018120	715249	-	BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK001373|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1##BC011607|ARMC1|55156|armadillo repeat containing 1##BC018846|ARMC1|55156|armadillo repeat containing 1##NM_018120|ARMC1|55156|armadillo repeat containing 1	0.115871	
chr6	39345364	39345511	reg1010794.p1	10.891	+	AF358909 AY253145 AY253146 AY253147 BC111860 NM_001135105 NM_001135106 NM_001135107 NM_032115 EU978943	-55098	-	AF358910 CU693040 DQ891712 DQ894889 EU978944 BC025726 AY358853 AF339912 AK310582 AK315273 NM_031460 NM_001135111	-63272	-	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	-148197	-	BC117307 BC143444 BC143445 AK131471 NM_145027	347708	-	TSC_hg19_v1_chr6_+_39760140 AK091749 AX747160	414702	+	TSC_hg19_v1_chr6_+_39760151 AK310941 AB002379 NM_001201427 BC047575	414725	+	AF358909|KCNK16|83795|potassium channel, subfamily K, member 16##AY253145|KCNK16|83795|potassium channel, subfamily K, member 16##AY253146|KCNK16|83795|potassium channel, subfamily K, member 16##AY253147|KCNK16|83795|potassium channel, subfamily K, member 16##BC111860|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135105|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135106|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135107|KCNK16|83795|potassium channel, subfamily K, member 16##NM_032115|KCNK16|83795|potassium channel, subfamily K, member 16##EU978943|KCNK16|83795|potassium channel, subfamily K, member 16##AF358910|KCNK17|89822|potassium channel, subfamily K, member 17##DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17##DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17##EU978944|KCNK17|89822|potassium channel, subfamily K, member 17##BC025726|KCNK17|89822|potassium channel, subfamily K, member 17##AY358853|KCNK17|89822|potassium channel, subfamily K, member 17##AF339912|KCNK17|89822|potassium channel, subfamily K, member 17##AK310582|KCNK17|89822|potassium channel, subfamily K, member 17##AK315273|KCNK17|89822|potassium channel, subfamily K, member 17##NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17##NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17##AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5##BC117307|KIF6|221458|kinesin family member 6##BC143444|KIF6|221458|kinesin family member 6##BC143445|KIF6|221458|kinesin family member 6##AK131471|KIF6|221458|kinesin family member 6##NM_145027|KIF6|221458|kinesin family member 6##AK310941|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AB002379|DAAM2|23500|dishevelled associated activator of morphogenesis 2##NM_001201427|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC047575|DAAM2|23500|dishevelled associated activator of morphogenesis 2	0.892438	CTCF.p2:-20:0.892
chr7	29961145	29961297	reg1010920.p1	10.891	+	TSC_hg19_v1_chr7_+_29846126 NM_001080529	-115081	+	TSC_hg19_v1_chr7_+_29603500 BC018144	-357690	+	TSC_hg19_v1_chr7_+_29603450 BC029131 NM_175887	-357802	+	TSC_hg19_v1_chr7_-_30029417 AB071705 AK295713 D83777 AK293462 BC040492 NM_001145515 NM_014766 NM_001145513	68287	-	AK295172 NM_001145514	68683	-	CU675039 DQ892525 DQ895737 TSC_hg19_v1_chr7_-_30066286 AK000738 NM_017946 AK309552 AY358643 BC005206	105000	-	NM_001080529|WIPF3|644150|WAS/WASL interacting protein family, member 3##BC018144|PRR15|222171|proline rich 15##BC029131|PRR15|222171|proline rich 15##NM_175887|PRR15|222171|proline rich 15##AB071705|SCRN1|9805|secernin 1##AK295713|SCRN1|9805|secernin 1##D83777|SCRN1|9805|secernin 1##AK293462|SCRN1|9805|secernin 1##BC040492|SCRN1|9805|secernin 1##NM_001145515|SCRN1|9805|secernin 1##NM_014766|SCRN1|9805|secernin 1##NM_001145513|SCRN1|9805|secernin 1##AK295172|SCRN1|9805|secernin 1##NM_001145514|SCRN1|9805|secernin 1##DQ892525|FKBP14|55033|FK506 binding protein 14, 22 kDa##DQ895737|FKBP14|55033|FK506 binding protein 14, 22 kDa##AK000738|FKBP14|55033|FK506 binding protein 14, 22 kDa##NM_017946|FKBP14|55033|FK506 binding protein 14, 22 kDa##AK309552|FKBP14|55033|FK506 binding protein 14, 22 kDa##AY358643|FKBP14|55033|FK506 binding protein 14, 22 kDa##BC005206|FKBP14|55033|FK506 binding protein 14, 22 kDa	0.907738	CTCF.p2:13:0.908
chr11	130304965	130305101	reg1005349.p3	10.890	+	TSC_hg19_v1_chr11_-_130298505 NM_007037	-6513	-	BC113874 TSC_hg19_v1_chr11_-_130298419 BC089435	-6671	-	TSC_hg19_v1_chr11_-_130184509 AK314701 BC030580 BC049375 BC071729 NM_014155	-120501	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	13629	+	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	481312	-	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	481355	-	NM_007037|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC113874|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC089435|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##AK314701|ZBTB44|29068|zinc finger and BTB domain containing 44##BC030580|ZBTB44|29068|zinc finger and BTB domain containing 44##BC049375|ZBTB44|29068|zinc finger and BTB domain containing 44##BC071729|ZBTB44|29068|zinc finger and BTB domain containing 44##NM_014155|ZBTB44|29068|zinc finger and BTB domain containing 44##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19	0.923365	CTCF.p2:-11:0.923
chr19	18174319	18174431	reg1007553.p1	10.890	+	TSC_hg19_v1_chr19_+_18118978 AF193051 NM_015683 AK000689 AK128588 BC022516 AK314657 AB529119	-55357	+	TSC_hg19_v1_chr19_+_18111932 NM_001025604 AK127940	-62425	+	NM_002248 U69883	-112265	+	EU832463 EU832545 BC137404 BC137406 NM_005535 NM_153701 U03187 BC029121 TSC_hg19_v1_chr19_-_18197721 AK225919 AK290423	23357	-	TSC_hg19_v1_chr19_+_18208608 AB527184 NM_015016 AB011133	34234	+	BC063240 TSC_hg19_v1_chr19_+_18263972	89606	+	AF193051|ARRDC2|27106|arrestin domain containing 2##NM_015683|ARRDC2|27106|arrestin domain containing 2##AK000689|ARRDC2|27106|arrestin domain containing 2##AK128588|ARRDC2|27106|arrestin domain containing 2##BC022516|ARRDC2|27106|arrestin domain containing 2##AK314657|ARRDC2|27106|arrestin domain containing 2##NM_001025604|ARRDC2|27106|arrestin domain containing 2##AK127940|ARRDC2|27106|arrestin domain containing 2##NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##EU832463|IL12RB1|3594|interleukin 12 receptor, beta 1##EU832545|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137404|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137406|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_005535|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_153701|IL12RB1|3594|interleukin 12 receptor, beta 1##U03187|IL12RB1|3594|interleukin 12 receptor, beta 1##BC029121|IL12RB1|3594|interleukin 12 receptor, beta 1##AK225919|IL12RB1|3594|interleukin 12 receptor, beta 1##AK290423|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_015016|MAST3|23031|microtubule associated serine/threonine kinase 3##AB011133|MAST3|23031|microtubule associated serine/threonine kinase 3	0.885657	CTCF.p2:0:0.886
chr1	203008575	203008720	reg1011444.p1	10.889	+	TSC_hg19_v1_chr1_+_202976528 BC013073 NM_138391 NM_001079809 BC150647 CU680486 CU688332	-32088	+	AF070537 TSC_hg19_v1_chr1_+_202976519 AK291426 AK312985 AK309745 BC067775	-32128	+	TSC_hg19_v1_chr1_+_202976501 AK297222	-32155	+	AK126624 NM_015053 BC132923 BC132925 BC144262	11691	+	BT007233 CU691060 AB463908 EU831793 EU831870 TSC_hg19_v1_chr1_-_203055140 X17651 BC053899	46479	-	NM_002479	46729	-	BC013073|TMEM183A|92703|transmembrane protein 183A##NM_138391|TMEM183A|92703|transmembrane protein 183A##NM_001079809|TMEM183B|653659|transmembrane protein 183B##BC150647|TMEM183A|92703|transmembrane protein 183A##AF070537|TMEM183A|92703|transmembrane protein 183A##AK291426|TMEM183A|92703|transmembrane protein 183A##AK312985|TMEM183A|92703|transmembrane protein 183A##AK309745|TMEM183A|92703|transmembrane protein 183A##BC067775|TMEM183A|92703|transmembrane protein 183A##AK297222|TMEM183B|653659|transmembrane protein 183B##AK126624|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##NM_015053|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##BC132923|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##BC132925|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##BC144262|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##BT007233|MYOG|4656|myogenin (myogenic factor 4)##EU831793|MYOG|4656|myogenin (myogenic factor 4)##EU831870|MYOG|4656|myogenin (myogenic factor 4)##X17651|MYOG|4656|myogenin (myogenic factor 4)##BC053899|MYOG|4656|myogenin (myogenic factor 4)##NM_002479|MYOG|4656|myogenin (myogenic factor 4)	0.999547	CTCF.p2:-13:1.000
chr1	246052249	246052379	reg1009609.p1	10.888	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-734006	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-918631	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-918684	+	AK024733 NM_022743	528397	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	618240	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	618294	-	AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3	0.85851	CTCF.p2:-7:0.859
chr17	2256484	2256599	reg1008137.p1	10.888	+	TSC_hg19_v1_chr17_+_2240796 NM_014853 AB007857 NM_001098509 BC039204 AK294955 AB275762 AB385325 AB449878 AK304263	-15639	+	NM_018128 AB037822	-15803	-	AB463326 TSC_hg19_v1_chr17_-_2239749 AK026565	-16797	-	X96401 NM_020310 TSC_hg19_v1_chr17_-_2304355 AK291596	47775	-	TSC_hg19_v1_chr17_-_2415189 BX647255 AK294547 BC050603 BC001213 AL832612 AK027410 AK296464 NM_024086	158604	-	TSC_hg19_v1_chr17_+_2496944 NM_000430 L13386	240429	+	NM_014853|SGSM2|9905|small G protein signaling modulator 2##AB007857|SGSM2|9905|small G protein signaling modulator 2##NM_001098509|SGSM2|9905|small G protein signaling modulator 2##BC039204|SGSM2|9905|small G protein signaling modulator 2##AK294955|SGSM2|9905|small G protein signaling modulator 2##AB275762|SGSM2|9905|small G protein signaling modulator 2##AB449878|SGSM2|9905|small G protein signaling modulator 2##AK304263|SGSM2|9905|small G protein signaling modulator 2##NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AK026565|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##X96401|MNT|4335|MAX binding protein##NM_020310|MNT|4335|MAX binding protein##AK291596|MNT|4335|MAX binding protein##BX647255|METTL16|79066|methyltransferase like 16##AK294547|METTL16|79066|methyltransferase like 16##BC050603|METTL16|79066|methyltransferase like 16##BC001213|METTL16|79066|methyltransferase like 16##AL832612|METTL16|79066|methyltransferase like 16##AK027410|METTL16|79066|methyltransferase like 16##AK296464|METTL16|79066|methyltransferase like 16##NM_024086|METTL16|79066|methyltransferase like 16##NM_000430|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13386|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	0.939156	CTCF.p2:-19:0.939
chr2	238384173	238384304	reg1010307.p2	10.888	+	TSC_hg19_v1_chr2_-_238322840 NM_004369 NM_057164 NM_057165 NM_057166 NM_057167	-61394	-	TSC_hg19_v1_chr2_-_238322815 X52022	-61417	-	AK303290 TSC_hg19_v1_chr2_-_238322814	-61424	-	TSC_hg19_v1_chr2_+_238395893 NM_001042467 NM_024101 AK296745 AK022207 AK292929 AK310821 AK225381 BC001653 BC051269	11658	+	AB015419 BC069081 BC069284 NM_015893	90978	+	TSC_hg19_v1_chr2_-_238499327 BC009827 BC050426 AL136645	115108	-	NM_004369|COL6A3|1293|collagen, type VI, alpha 3##NM_057164|COL6A3|1293|collagen, type VI, alpha 3##NM_057165|COL6A3|1293|collagen, type VI, alpha 3##NM_057166|COL6A3|1293|collagen, type VI, alpha 3##NM_057167|COL6A3|1293|collagen, type VI, alpha 3##X52022|COL6A3|1293|collagen, type VI, alpha 3##AK303290|COL6A3|1293|collagen, type VI, alpha 3##NM_001042467|MLPH|79083|melanophilin##NM_024101|MLPH|79083|melanophilin##AK296745|MLPH|79083|melanophilin##AK022207|MLPH|79083|melanophilin##AK292929|MLPH|79083|melanophilin##AK310821|MLPH|79083|melanophilin##AK225381|MLPH|79083|melanophilin##BC001653|MLPH|79083|melanophilin##BC051269|MLPH|79083|melanophilin##AB015419|PRLH|51052|prolactin releasing hormone##BC069081|PRLH|51052|prolactin releasing hormone##BC069284|PRLH|51052|prolactin releasing hormone##NM_015893|PRLH|51052|prolactin releasing hormone##BC009827|RAB17|64284|RAB17, member RAS oncogene family##BC050426|RAB17|64284|RAB17, member RAS oncogene family##AL136645|RAB17|64284|RAB17, member RAS oncogene family	0.125558	
chr12	120375984	120376104	reg1011502.p1	10.887	+	TSC_hg19_v1_chr12_-_120315112 AY209000 AY257469 BC008127 AY681966 NM_001206999 NM_007174	-60951	-	AK123136 TSC_hg19_v1_chr12_-_120241305	-134747	-	TSC_hg19_v1_chr12_+_120105769 AK312495 NM_006253 BC017671 AF022116 BC001007 BC001056 BC001823 BC018818 U83994 AK301165 Y12556 AB590811 AJ224515	-270192	+	TSC_hg19_v1_chr12_+_120427616 AK129960 NM_207311 U88834	51554	+	AF498960 BT020024 CR536486 CR541683 CU677517 DQ890586 DQ890603 DQ893750 AB528529 TSC_hg19_v1_chr12_-_120554547 X79781 AK304620	178457	-	TSC_hg19_v1_chr12_-_120554551 AK312538	178509	-	AY209000|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY257469|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##BC008127|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY681966|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_001206999|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_007174|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AK123136|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AK312495|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##NM_006253|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC017671|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AF022116|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001007|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001056|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001823|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC018818|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##U83994|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK301165|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##Y12556|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AJ224515|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK129960|CCDC64|92558|coiled-coil domain containing 64##NM_207311|CCDC64|92558|coiled-coil domain containing 64##U88834|CCDC64|92558|coiled-coil domain containing 64##AF498960|RAB35|11021|RAB35, member RAS oncogene family##BT020024|RAB35|11021|RAB35, member RAS oncogene family##CR536486|RAB35|11021|RAB35, member RAS oncogene family##CR541683|RAB35|11021|RAB35, member RAS oncogene family##DQ890586|RAB35|11021|RAB35, member RAS oncogene family##DQ890603|RAB35|11021|RAB35, member RAS oncogene family##DQ893750|RAB35|11021|RAB35, member RAS oncogene family##X79781|RAB35|11021|RAB35, member RAS oncogene family##AK304620|RAB35|11021|RAB35, member RAS oncogene family##AK312538|RAB35|11021|RAB35, member RAS oncogene family	0.999804	CTCF.p2:0:1.000
chr15	91576471	91576611	reg1011719.p1	10.887	+	BC016445 TSC_hg19_v1_chr15_-_91565785 AK074863 AF201694 AK315721 AF308803 AK027754 AK300608 AK293688 AK308480 NM_018668	-10771	-	CU677627 TSC_hg19_v1_chr15_-_91565525	-11039	-	AF044588 BC003138 TSC_hg19_v1_chr15_-_91537766 AK297117 AK304094 BC005140 AK312600 NM_003981 NM_199413 NM_199414	-38775	-	NM_001167580 TSC_hg19_v1_chr15_+_91643185 AK294902	66668	+	TSC_hg19_v1_chr15_+_91643505 NM_014848 BC030011	66945	+	TSC_hg19_v1_chr15_+_91643558 AF052188	67018	+	BC016445|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK074863|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AF201694|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK315721|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AF308803|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK027754|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK300608|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK293688|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK308480|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##NM_018668|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AF044588|PRC1|9055|protein regulator of cytokinesis 1##BC003138|PRC1|9055|protein regulator of cytokinesis 1##AK297117|PRC1|9055|protein regulator of cytokinesis 1##AK304094|PRC1|9055|protein regulator of cytokinesis 1##BC005140|PRC1|9055|protein regulator of cytokinesis 1##AK312600|PRC1|9055|protein regulator of cytokinesis 1##NM_003981|PRC1|9055|protein regulator of cytokinesis 1##NM_199413|PRC1|9055|protein regulator of cytokinesis 1##NM_199414|PRC1|9055|protein regulator of cytokinesis 1##NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B##AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_014848|SV2B|9899|synaptic vesicle glycoprotein 2B##BC030011|SV2B|9899|synaptic vesicle glycoprotein 2B##AF052188|SV2B|9899|synaptic vesicle glycoprotein 2B	1.386319	CTCF.p2:6:0.822	CTCF.p2:-89:0.565
chr2	11552231	11552371	reg1010695.p1	10.887	+	TSC_hg19_v1_chr2_-_11484762 AB014519 NM_004850	-67556	-	AK301439 AK313402 TSC_hg19_v1_chr2_+_11295602	-256699	+	TSC_hg19_v1_chr2_+_11295592 AK001091	-256720	+	BC107740 TSC_hg19_v1_chr2_-_11606272 BC008348 BC062610 AK290413 AK293504	53943	-	TSC_hg19_v1_chr2_-_11606278 AK223407 AY083996 NM_198256	53985	-	AF245388 NM_014668	121940	+	AB014519|ROCK2|9475|Rho-associated, coiled-coil containing protein kinase 2##NM_004850|ROCK2|9475|Rho-associated, coiled-coil containing protein kinase 2##AK301439|PQLC3|130814|PQ loop repeat containing 3##AK313402|PQLC3|130814|PQ loop repeat containing 3##AK001091|PQLC3|130814|PQ loop repeat containing 3##BC107740|E2F6|1876|E2F transcription factor 6##BC008348|E2F6|1876|E2F transcription factor 6##BC062610|E2F6|1876|E2F transcription factor 6##AK290413|E2F6|1876|E2F transcription factor 6##AK293504|E2F6|1876|E2F transcription factor 6##AK223407|E2F6|1876|E2F transcription factor 6##AY083996|E2F6|1876|E2F transcription factor 6##NM_198256|E2F6|1876|E2F transcription factor 6##AF245388|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_014668|GREB1|9687|growth regulation by estrogen in breast cancer 1	0.810552	CTCF.p2:25:0.811
chr6	119450653	119450792	reg1011138.p1	10.887	+	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-50814	-	CU687406 AB385245 EU832813 GQ129264 TSC_hg19_v1_chr6_-_119399478	-51298	-	TSC_hg19_v1_chr6_-_119256325 NM_153255	-194395	-	BX538186 AK091682 AX747126 NM_001100411	19624	-	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	220199	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	2204921	-	BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##EU832813|FAM184A|79632|family with sequence similarity 184, member A##GQ129264|FAM184A|79632|family with sequence similarity 184, member A##NM_153255|MCM9|254394|minichromosome maintenance complex component 9##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170	0.978474	CTCF.p2:6:0.978
chr11	74164549	74164670	reg1008547.p1	10.886	+	TSC_hg19_v1_chr11_-_74109469 BC027950 AB019210 AK056591 BC059360 NM_173582	-55119	-	BC089446 TSC_hg19_v1_chr11_-_74022686 BC040582 AL833965 AY358521 AK300598 AY327887 BC117333 BC126170 AY313448 NM_182904	-141927	-	TSC_hg19_v1_chr11_+_73882440 AB385584 CU678344 DQ892348 DQ895778	-282154	+	CR936625 DQ192291 NM_005472	13987	-	TSC_hg19_v1_chr11_-_74204756 NM_001144869	40141	-	AK302677 AK316370 D26018 NM_006591 TSC_hg19_v1_chr11_+_74303654 BC092454 AK316301 BC108908 BC108909 BC032636 BC058840 BC041703 AB383722	139054	+	AB019210|PGM2L1|283209|phosphoglucomutase 2-like 1##AK056591|PGM2L1|283209|phosphoglucomutase 2-like 1##BC059360|PGM2L1|283209|phosphoglucomutase 2-like 1##NM_173582|PGM2L1|283209|phosphoglucomutase 2-like 1##BC089446|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC040582|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AL833965|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY358521|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AK300598|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY327887|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC117333|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC126170|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY313448|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##NM_182904|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##DQ892348|PPME1|51400|protein phosphatase methylesterase 1##DQ895778|PPME1|51400|protein phosphatase methylesterase 1##CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_001144869|LIPT2|387787|lipoyl(octanoyl) transferase 2 (putative)##AK302677|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316370|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##D26018|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_006591|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC092454|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316301|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108908|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108909|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC032636|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC058840|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC041703|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit	0.999831	CTCF.p2:19:1.000
chr17	80279424	80279556	reg1007986.p2	10.886	+	BT006696 DQ890740 DQ892590 DQ893911 DQ895810 AK298096 AK310061 BC009293 BC013297 X06180 AK223465 AY935534 AY935535 AY935536 AY935537 AK310558 NM_006137	-4066	-	TSC_hg19_v1_chr17_-_80231580 BC003558 BC015775 AK291758 AK295638 AK303365 NM_001893 NM_139062	-47910	-	TSC_hg19_v1_chr17_-_80231315 AB091044 AK296969	-48197	-	TSC_hg19_v1_chr17_-_80291610 AK223068 BC017716	12123	-	AK312980 U77643 TSC_hg19_v1_chr17_-_80291643 AK223104	12156	-	TSC_hg19_v1_chr17_-_80291859 AK290708	12356	-	BT006696|CD7|924|CD7 molecule##DQ890740|CD7|924|CD7 molecule##DQ892590|CD7|924|CD7 molecule##DQ893911|CD7|924|CD7 molecule##DQ895810|CD7|924|CD7 molecule##AK298096|CD7|924|CD7 molecule##AK310061|CD7|924|CD7 molecule##BC009293|CD7|924|CD7 molecule##BC013297|CD7|924|CD7 molecule##X06180|CD7|924|CD7 molecule##AK223465|CD7|924|CD7 molecule##AY935534|CD7|924|CD7 molecule##AY935535|CD7|924|CD7 molecule##AY935536|CD7|924|CD7 molecule##AY935537|CD7|924|CD7 molecule##AK310558|CD7|924|CD7 molecule##NM_006137|CD7|924|CD7 molecule##BC003558|CSNK1D|1453|casein kinase 1, delta##BC015775|CSNK1D|1453|casein kinase 1, delta##AK291758|CSNK1D|1453|casein kinase 1, delta##AK295638|CSNK1D|1453|casein kinase 1, delta##AK303365|CSNK1D|1453|casein kinase 1, delta##NM_001893|CSNK1D|1453|casein kinase 1, delta##NM_139062|CSNK1D|1453|casein kinase 1, delta##AB091044|CSNK1D|1453|casein kinase 1, delta##AK296969|CSNK1D|1453|casein kinase 1, delta##AK223068|SECTM1|6398|secreted and transmembrane 1##BC017716|SECTM1|6398|secreted and transmembrane 1##AK312980|SECTM1|6398|secreted and transmembrane 1##U77643|SECTM1|6398|secreted and transmembrane 1##AK223104|SECTM1|6398|secreted and transmembrane 1##AK290708|SECTM1|6398|secreted and transmembrane 1	0.992485	CTCF.p2:4:0.992
chrX	31232197	31232328	reg1010404.p1	10.886	+	BC069538 BC100768 BC100769 BC100770 BC069069 AF285592 NM_031894	-142099	-	TSC_hg19_v1_chrX_-_30907408 AK297274 NM_152787	-324803	-	TSC_hg19_v1_chrX_+_30671612 L13943 AK294938 AK294304 BX647604 AK308238 BC037549 CU688226 DQ891580 DQ894773	-560634	+	CU688550 M92650 TSC_hg19_v1_chrX_-_31285072 BC070078 NM_004015 NM_004016 NM_004017 NM_004018 NM_004019 S42206 BC094758 AK299936 BC028720 S38776	52772	-	NM_004014 S62617	294152	-	L35854 NM_004013 NM_004020 NM_004021 NM_004022 NM_004023	941323	-	BC069538|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100768|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100769|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100770|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC069069|FTHL17|53940|ferritin, heavy polypeptide-like 17##AF285592|FTHL17|53940|ferritin, heavy polypeptide-like 17##NM_031894|FTHL17|53940|ferritin, heavy polypeptide-like 17##AK297274|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##NM_152787|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##L13943|GK|2710|glycerol kinase##AK294938|GK|2710|glycerol kinase##AK294304|GK|2710|glycerol kinase##BX647604|GK|2710|glycerol kinase##AK308238|GK|2710|glycerol kinase##BC037549|GK|2710|glycerol kinase##DQ891580|GK|2710|glycerol kinase##DQ894773|GK|2710|glycerol kinase##M92650|DMD|1756|dystrophin##BC070078|DMD|1756|dystrophin##NM_004015|DMD|1756|dystrophin##NM_004016|DMD|1756|dystrophin##NM_004017|DMD|1756|dystrophin##NM_004018|DMD|1756|dystrophin##NM_004019|DMD|1756|dystrophin##S42206|DMD|1756|dystrophin##BC094758|DMD|1756|dystrophin##AK299936|DMD|1756|dystrophin##BC028720|DMD|1756|dystrophin##S38776|DMD|1756|dystrophin##NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin##L35854|DMD|1756|dystrophin##NM_004013|DMD|1756|dystrophin##NM_004020|DMD|1756|dystrophin##NM_004021|DMD|1756|dystrophin##NM_004022|DMD|1756|dystrophin##NM_004023|DMD|1756|dystrophin	0.571029	CTCF.p2:-25:0.571
chr13	114520057	114520152	reg1006798.p1	10.885	+	TSC_hg19_v1_chr13_+_114462179 BC018995 NM_182614 AK295653 EU831453 EU831540	-57893	+	AK289912 NM_002929 U63973 BC140945 L77503	-198527	+	CU688596 DQ890817 DQ893973 M75110 BC029059 BC042846 AK310129 NM_000705	-207619	-	AL833761 TSC_hg19_v1_chr13_-_114526268	6113	-	AK092028 NM_001143946	16609	-	TSC_hg19_v1_chr13_-_114538954 AK122969 NM_001143945	18880	-	BC018995|FAM70B|348013|family with sequence similarity 70, member B##NM_182614|FAM70B|348013|family with sequence similarity 70, member B##AK295653|FAM70B|348013|family with sequence similarity 70, member B##EU831453|FAM70B|348013|family with sequence similarity 70, member B##EU831540|FAM70B|348013|family with sequence similarity 70, member B##AK289912|GRK1|6011|G protein-coupled receptor kinase 1##NM_002929|GRK1|6011|G protein-coupled receptor kinase 1##U63973|GRK1|6011|G protein-coupled receptor kinase 1##BC140945|GRK1|6011|G protein-coupled receptor kinase 1##L77503|GRK1|6011|G protein-coupled receptor kinase 1##DQ890817|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##DQ893973|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##M75110|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##BC029059|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##BC042846|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##AK310129|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##NM_000705|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##AL833761|GAS6|2621|growth arrest-specific 6##AK092028|GAS6|2621|growth arrest-specific 6##NM_001143946|GAS6|2621|growth arrest-specific 6##AK122969|GAS6|2621|growth arrest-specific 6##NM_001143945|GAS6|2621|growth arrest-specific 6	0.947412	CTCF.p2:0:0.947
chr2	216796100	216796247	reg1011372.p1	10.884	+	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-495391	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-495653	-	AF312399 TSC_hg19_v1_chr2_-_216290008	-506201	-	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	82163	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	150371	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	150519	+	BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##AF312399|FN1|2335|fibronectin 1##AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169	0.47778	CTCF.p2:1:0.478
chr5	113696754	113696873	reg1009290.p1	10.884	+	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	-847417	+	AK128596 NM_001085377	-872287	-	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	-926181	-	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	1236	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	1648	+	BC015371 NM_170775 BC040722	72436	+	AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2##AK128596|MCC|4163|mutated in colorectal cancers##NM_001085377|MCC|4163|mutated in colorectal cancers##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	0.20688	CTCF.p2:74:0.207
chr10	31015838	31015970	reg1008124.p1	10.883	+	AF139543 BC066294 NM_183058	-97269	-	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-292783	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-292965	+	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	272548	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	304917	-	TSC_hg19_v1_chr10_+_31607451 BX647794	591532	+	AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1	0.999876	CTCF.p2:-3:1.000
chr13	70431487	70431609	reg1008779.p2	10.883	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-2627044	-	AK289924 NM_022843	-8441894	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-8442295	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	250993	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	2008711	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	2009215	-	BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)	0.973125	CTCF.p2:5:0.973
chr17	33445148	33445266	reg1009166.p1	10.883	+	TSC_hg19_v1_chr17_-_33416298 AK093112 AX747930 BC028424	-28896	-	TSC_hg19_v1_chr17_-_33390690 CR933651 NM_001017368	-54490	-	TSC_hg19_v1_chr17_+_33307530 NM_002311 NM_013975 BC068005 AK300363 AK308407 U40671 X84740 BC009026	-137619	+	AB464124 DQ892318 DQ895520 BC002723 AB013341 AB016223 AB016224 AB016225 Y15572 AF034956 BC014422 TSC_hg19_v1_chr17_-_33446836 AK296241 BX647297 AK301249	1538	-	TSC_hg19_v1_chr17_-_33446880 NM_001142571 NM_002878 NM_133629	1668	-	AK313775 NM_017559 BC024002 AK225743 AL133054 EU831600 EU831687	3447	+	AK093112|RFFL|117584|ring finger and FYVE-like domain containing 1##BC028424|RFFL|117584|ring finger and FYVE-like domain containing 1##CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1##NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1##NM_002311|LIG3|3980|ligase III, DNA, ATP-dependent##NM_013975|LIG3|3980|ligase III, DNA, ATP-dependent##BC068005|LIG3|3980|ligase III, DNA, ATP-dependent##AK300363|LIG3|3980|ligase III, DNA, ATP-dependent##AK308407|LIG3|3980|ligase III, DNA, ATP-dependent##U40671|LIG3|3980|ligase III, DNA, ATP-dependent##X84740|LIG3|3980|ligase III, DNA, ATP-dependent##BC009026|LIG3|3980|ligase III, DNA, ATP-dependent##DQ892318|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##DQ895520|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC002723|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB013341|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016223|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016224|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016225|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##Y15572|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AF034956|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC014422|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK296241|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BX647297|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK301249|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_001142571|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_002878|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_133629|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK313775|FNDC8|54752|fibronectin type III domain containing 8##NM_017559|FNDC8|54752|fibronectin type III domain containing 8##BC024002|FNDC8|54752|fibronectin type III domain containing 8##AK225743|FNDC8|54752|fibronectin type III domain containing 8##AL133054|FNDC8|54752|fibronectin type III domain containing 8##EU831600|FNDC8|54752|fibronectin type III domain containing 8##EU831687|FNDC8|54752|fibronectin type III domain containing 8	0.886908	CTCF.p2:27:0.887
chr17	38689666	38689821	reg1011183.p1	10.883	+	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	-31897	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-89924	+	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	-115619	-	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	31975	-	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	114327	-	BC069196 TSC_hg19_v1_chr17_-_38804818	115053	-	AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC069196|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.979437	CTCF.p2:1:0.979
chr9	127299120	127299247	reg1009463.p1	10.883	+	TSC_hg19_v1_chr9_-_127269711 BC032501 NM_004959	-29479	-	AY278562 NM_001161808	-85761	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	-121463	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	121521	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	234327	-	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	240317	+	BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144##BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A	0.979441	CTCF.p2:6:0.979
chr12	120703698	120703785	reg1007914.p1	10.882	+	TSC_hg19_v1_chr12_-_120703574 NM_001080855 NM_001243756 NM_002859	-151	-	TSC_hg19_v1_chr12_-_120703534 AK299486 BC136787 BC136794 BC144410 U14588 AB209034 AK298057 AK314204	-227	-	BX648777 NM_025157	-15782	-	NM_012240 TSC_hg19_v1_chr12_+_120740123 BC034736 AF083109 BC109319 BC109320	36401	+	AB464016 EU832774 GQ129318 AK311830 BC005386 BC013384 BC106725 BC106726 M21054 NM_000928	61832	-	AB463899 AB012851 NM_002442 TSC_hg19_v1_chr12_-_120806968	103195	-	NM_001080855|PXN|5829|paxillin##NM_001243756|PXN|5829|paxillin##NM_002859|PXN|5829|paxillin##AK299486|PXN|5829|paxillin##BC136787|PXN|5829|paxillin##BC136794|PXN|5829|paxillin##BC144410|PXN|5829|paxillin##U14588|PXN|5829|paxillin##AB209034|PXN|5829|paxillin##AK298057|PXN|5829|paxillin##AK314204|PXN|5829|paxillin##BX648777|PXN|5829|paxillin##NM_025157|PXN|5829|paxillin##NM_012240|SIRT4|23409|sirtuin 4##BC034736|SIRT4|23409|sirtuin 4##AF083109|SIRT4|23409|sirtuin 4##BC109319|SIRT4|23409|sirtuin 4##BC109320|SIRT4|23409|sirtuin 4##EU832774|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##GQ129318|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##AK311830|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC005386|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC013384|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106725|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106726|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##M21054|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##NM_000928|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##AB012851|MSI1|4440|musashi homolog 1 (Drosophila)##NM_002442|MSI1|4440|musashi homolog 1 (Drosophila)	0.970847	CTCF.p2:-15:0.971
chr9	113189927	113190038	reg1009254.p1	10.882	+	HQ258720 AF305830 BC130549 BC130551 BC144461 BC035743 NM_001003936	-89882	-	TSC_hg19_v1_chr9_-_113018882 NM_001244938 NM_003329	-171083	-	TSC_hg19_v1_chr9_-_113018817 BX647247 D28376 AK289508	-171157	-	TSC_hg19_v1_chr9_-_113342011 AJ619977 AY243503 AK122605 BC030816 NM_153366	152082	-	NM_001166280 NM_001166281 NM_005592 AF006464 BC109098 BC109099 EU832778 EU832779 GQ129313	241134	+	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	610430	-	HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001244938|TXN|7295|thioredoxin##NM_003329|TXN|7295|thioredoxin##BX647247|TXN|7295|thioredoxin##D28376|TXN|7295|thioredoxin##AK289508|TXN|7295|thioredoxin##AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1	0.219542	CTCF.p2:-3:0.220
chr1	116249558	116249683	reg1008732.p2	10.881	+	AB057596 NM_001172412	-64371	+	NM_001172411 NM_138959 BC065272 AF481859	-65028	+	BC032517 NM_002506 X52599	-368767	-	CU692536 DQ893219 DQ896548 D55655 AK225959 TSC_hg19_v1_chr1_-_116311307	61614	-	TSC_hg19_v1_chr1_-_116311336 AK295502 BC022288 AK313041	61731	-	AK129891 TSC_hg19_v1_chr1_-_116311410 NM_001232 AK293595	61796	-	AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##DQ893219|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ896548|CASQ2|845|calsequestrin 2 (cardiac muscle)##D55655|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK225959|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK295502|CASQ2|845|calsequestrin 2 (cardiac muscle)##BC022288|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK313041|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK129891|CASQ2|845|calsequestrin 2 (cardiac muscle)##NM_001232|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK293595|CASQ2|845|calsequestrin 2 (cardiac muscle)	0.949406	CTCF.p2:19:0.949
chr5	95680584	95680710	reg1007590.p1	10.880	+	TSC_hg19_v1_chr5_-_95297609 BC028412 NM_012081	-382962	-	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	-383149	-	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	-522127	-	AK308575 NM_001177876	68041	-	AK303888 NM_001177875	87215	-	AB208874 AB590528 BC130295 BC136486 TSC_hg19_v1_chr5_-_95768927 X64810 M90753 BC031211 NM_000439	88175	-	BC028412|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_012081|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AK303888|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177875|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AB208874|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC130295|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC136486|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##X64810|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##M90753|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC031211|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_000439|PCSK1|5122|proprotein convertase subtilisin/kexin type 1	0.7293	CTCF.p2:-7:0.729
chr20	62338246	62338393	reg1008968.p2	10.878	+	AF217794 TSC_hg19_v1_chr20_+_62328078 AY124378 AY124379 AB590899 AF134240	-10225	+	TSC_hg19_v1_chr20_+_62328005 NM_003823 AF104419 AY358279 BC017065	-10308	+	TSC_hg19_v1_chr20_+_62321100 AL080127	-17171	+	NM_001083113 AB058750	485	+	TSC_hg19_v1_chr20_-_62339259 BC092480 BC021023 BC093967 BC143447 BC143448 BC143467 BC143472 BC143477	920	-	TSC_hg19_v1_chr20_-_62339374 BC010068 NM_001134758 NM_003224	1027	-	AF134240|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##NM_003823|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AF104419|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AY358279|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##BC017065|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AL080127|RTEL1|51750|regulator of telomere elongation helicase 1##NM_001083113|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##AB058750|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##BC092480|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC021023|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC093967|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143447|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143448|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143467|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143472|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143477|ARFRP1|10139|ADP-ribosylation factor related protein 1##NM_001134758|ARFRP1|10139|ADP-ribosylation factor related protein 1##NM_003224|ARFRP1|10139|ADP-ribosylation factor related protein 1	0.0	
chr11	16841953	16842087	reg1010406.p1	10.877	+	TSC_hg19_v1_chr11_+_16760204 BC103747 AK315382 BC007103 BC016352 BC020937 U51678 CR456882 CU675547 AK124165	-81736	+	NM_014267 TSC_hg19_v1_chr11_+_16760165	-81860	+	AF309034 NM_033326	-344095	-	TSC_hg19_v1_chr11_-_16996590 D28414	154556	-	AB385210 TSC_hg19_v1_chr11_-_17035962 BC071599 NM_175058	193945	-	X79239 AB528349 CU688732 TSC_hg19_v1_chr11_-_17099216 DQ891107 DQ894288 BC000475 BC029732 BC100032 BC006772 AK312060 BC066322 D28429 L01124 NM_001017	257219	-	BC103747|C11orf58|10944|chromosome 11 open reading frame 58##AK315382|C11orf58|10944|chromosome 11 open reading frame 58##BC007103|C11orf58|10944|chromosome 11 open reading frame 58##BC016352|C11orf58|10944|chromosome 11 open reading frame 58##BC020937|C11orf58|10944|chromosome 11 open reading frame 58##U51678|C11orf58|10944|chromosome 11 open reading frame 58##CR456882|C11orf58|10944|chromosome 11 open reading frame 58##NM_014267|C11orf58|10944|chromosome 11 open reading frame 58##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6##D28414|RPL36A|6173|ribosomal protein L36a##BC071599|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##NM_175058|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##X79239|RPS13|6207|ribosomal protein S13##DQ891107|RPS13|6207|ribosomal protein S13##DQ894288|RPS13|6207|ribosomal protein S13##BC000475|RPS13|6207|ribosomal protein S13##BC029732|RPS13|6207|ribosomal protein S13##BC100032|RPS13|6207|ribosomal protein S13##BC006772|RPS13|6207|ribosomal protein S13##AK312060|RPS13|6207|ribosomal protein S13##BC066322|RPS13|6207|ribosomal protein S13##L01124|RPS13|6207|ribosomal protein S13##NM_001017|RPS13|6207|ribosomal protein S13	0.996374	CTCF.p2:-9:0.996
chr4	153561547	153561703	reg1007729.p2	10.877	+	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	-104192	+	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	-105331	-	NM_001013415 AY008274	-257961	-	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	39575	-	BC037869 NM_145720	139278	-	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	139396	+	AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154##BC037869|TIGD4|201798|tigger transposable element derived 4##NM_145720|TIGD4|201798|tigger transposable element derived 4##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1	0.976565	CTCF.p2:12:0.977
chr11	6727256	6727403	reg1012154.p1	10.876	+	TSC_hg19_v1_chr11_-_6704541 CR457177 DQ891581 DQ894774 DQ895036 AB463889 BC012306 AK026857 AF164797 AF141338 NM_022061	-22755	-	TSC_hg19_v1_chr11_-_6676982 AB053446 NM_003737	-50366	-	TSC_hg19_v1_chr11_-_6643809 BC038382	-83468	-	NM_001004490 BC140734	62907	-	BC151143 NM_001004489	78918	+	BC101489 BC101491 NM_003696	89746	-	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17##DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17##DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17##DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17##BC012306|MRPL17|63875|mitochondrial ribosomal protein L17##AK026857|MRPL17|63875|mitochondrial ribosomal protein L17##AF164797|MRPL17|63875|mitochondrial ribosomal protein L17##AF141338|MRPL17|63875|mitochondrial ribosomal protein L17##NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17##AB053446|DCHS1|8642|dachsous 1 (Drosophila)##NM_003737|DCHS1|8642|dachsous 1 (Drosophila)##BC038382|DCHS1|8642|dachsous 1 (Drosophila)##NM_001004490|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC140734|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC151143|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##NM_001004489|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	0.975187	CTCF.p2:2:0.975
chr18	55848099	55848222	reg1009279.p1	10.876	+	TSC_hg19_v1_chr18_+_55816551 AY112983 AY112984 DQ181796 NM_001144965 NM_001144968 NM_001144969 NM_001144971 AY112985	-31603	+	AF385931 NM_001144964	-133703	+	TSC_hg19_v1_chr18_+_55712924 AY243322	-135253	+	TSC_hg19_v1_chr18_+_55862636 NM_001144970 AK294963 AY243318 AB007899	14570	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	40602	+	TSC_hg19_v1_chr18_+_55888802 AK300444	40643	+	AY112983|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112984|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ181796|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144965|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144968|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144969|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144971|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112985|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AF385931|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144964|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243322|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.999138	CTCF.p2:11:0.999
chr2	228336730	228336847	reg1008531.p2	10.876	+	AY358671 BC137256 BC137257 BC035754 TSC_hg19_v1_chr2_-_228244023 AK026453 NM_024795	-92774	-	AF246239 NM_020194	-144561	+	TSC_hg19_v1_chr2_+_228189983 AK026137 BC093024 AF258660	-146744	+	TSC_hg19_v1_chr2_+_228336861 AK097451	54	+	TSC_hg19_v1_chr2_+_228336877 NM_001135187 NM_001135188 NM_001135189 NM_004504 BC030592 X89478 BC096272 BC096273 BC096274 BC096275 AB527534 CU688928	218	+	TSC_hg19_v1_chr2_+_228356287 AK295030	19503	+	AY358671|TM4SF20|79853|transmembrane 4 L six family member 20##BC137256|TM4SF20|79853|transmembrane 4 L six family member 20##BC137257|TM4SF20|79853|transmembrane 4 L six family member 20##BC035754|TM4SF20|79853|transmembrane 4 L six family member 20##AK026453|TM4SF20|79853|transmembrane 4 L six family member 20##NM_024795|TM4SF20|79853|transmembrane 4 L six family member 20##AF246239|MFF|56947|mitochondrial fission factor##NM_020194|MFF|56947|mitochondrial fission factor##AK026137|MFF|56947|mitochondrial fission factor##BC093024|MFF|56947|mitochondrial fission factor##AF258660|MFF|56947|mitochondrial fission factor##AK097451|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135187|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135188|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135189|AGFG1|3267|ArfGAP with FG repeats 1##NM_004504|AGFG1|3267|ArfGAP with FG repeats 1##BC030592|AGFG1|3267|ArfGAP with FG repeats 1##X89478|AGFG1|3267|ArfGAP with FG repeats 1##BC096272|AGFG1|3267|ArfGAP with FG repeats 1##BC096273|AGFG1|3267|ArfGAP with FG repeats 1##BC096274|AGFG1|3267|ArfGAP with FG repeats 1##BC096275|AGFG1|3267|ArfGAP with FG repeats 1##AK295030|AGFG1|3267|ArfGAP with FG repeats 1	0.999913	CTCF.p2:9:1.000
chr4	124312125	124312271	reg1011072.p1	10.876	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-467946	+	AF019632 AK294450 NM_198041	-468058	-	TSC_hg19_v1_chr4_-_123843731 DQ893139 DQ896423 BC009842 AB209758 AK291871 AF019633 NM_007083	-468437	-	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	5758	+	AK026960 BC063856 NM_005841	8475	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	1321616	-	NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AF019632|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK294450|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_198041|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50	0.103129	
chr5	153955515	153955659	reg1011670.p1	10.875	+	TSC_hg19_v1_chr5_-_153857823 AF061756 NM_004821	-97765	-	TSC_hg19_v1_chr5_-_153857790 BC021190	-97799	-	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	-129977	+	BC001460 NM_015315 CU674716	136886	+	TSC_hg19_v1_chr5_+_154134891 AB018274	179308	+	TSC_hg19_v1_chr5_+_154135038 AK091465 AX747001	179494	+	AF061756|HAND1|9421|heart and neural crest derivatives expressed 1##NM_004821|HAND1|9421|heart and neural crest derivatives expressed 1##BC021190|HAND1|9421|heart and neural crest derivatives expressed 1##AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like##BC001460|LARP1|23367|La ribonucleoprotein domain family, member 1##NM_015315|LARP1|23367|La ribonucleoprotein domain family, member 1##AB018274|LARP1|23367|La ribonucleoprotein domain family, member 1##AK091465|LARP1|23367|La ribonucleoprotein domain family, member 1	0.956848	CTCF.p2:2:0.957
chr1	101985934	101986052	reg1009473.p2	10.873	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-283423	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-283612	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-494560	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	476494	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	476797	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1510790	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.953414	CTCF.p2:-10:0.937
chr20	311345	311455	reg1009387.p1	10.872	+	TSC_hg19_v1_chr20_+_306226 BC067361 NM_006943 U35612 BC028103	-5164	+	TSC_hg19_v1_chr20_+_278213 BC069238 NM_033089 AK025768 BC107584 BC036469	-33191	+	AK302223 TSC_hg19_v1_chr20_-_271367 BC134417 BC137450 BC144648 BC144649 AK097394 NM_080571 NM_153269	-40036	-	TSC_hg19_v1_chr20_+_327371 NM_024958 AK290527	16005	+	TSC_hg19_v1_chr20_+_327754 AK026982	16349	+	AY247738 NM_021158 TSC_hg19_v1_chr20_+_361483 AJ697936 AK026945 AK222837 BC027484	50013	+	BC067361|SOX12|6666|SRY (sex determining region Y)-box 12##NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12##U35612|SOX12|6666|SRY (sex determining region Y)-box 12##BC028103|SOX12|6666|SRY (sex determining region Y)-box 12##BC069238|ZCCHC3|85364|zinc finger, CCHC domain containing 3##NM_033089|ZCCHC3|85364|zinc finger, CCHC domain containing 3##AK025768|ZCCHC3|85364|zinc finger, CCHC domain containing 3##BC107584|ZCCHC3|85364|zinc finger, CCHC domain containing 3##BC036469|ZCCHC3|85364|zinc finger, CCHC domain containing 3##AK302223|C20orf96|140680|chromosome 20 open reading frame 96##BC134417|C20orf96|140680|chromosome 20 open reading frame 96##BC137450|C20orf96|140680|chromosome 20 open reading frame 96##BC144648|C20orf96|140680|chromosome 20 open reading frame 96##BC144649|C20orf96|140680|chromosome 20 open reading frame 96##AK097394|C20orf96|140680|chromosome 20 open reading frame 96##NM_080571|C20orf96|140680|chromosome 20 open reading frame 96##NM_153269|C20orf96|140680|chromosome 20 open reading frame 96##NM_024958|NRSN2|80023|neurensin 2##AK290527|NRSN2|80023|neurensin 2##AK026982|NRSN2|80023|neurensin 2##AY247738|TRIB3|57761|tribbles homolog 3 (Drosophila)##NM_021158|TRIB3|57761|tribbles homolog 3 (Drosophila)##AJ697936|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK026945|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK222837|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC027484|TRIB3|57761|tribbles homolog 3 (Drosophila)	0.963858	CTCF.p2:3:0.964
chr6_cox_hap2	3076068	3076196	reg1012392.p1	10.872	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999083	CTCF.p2:8:0.999
chr1	1307556	1307686	reg1011205.p1	10.871	+	TSC_hg19_v1_chr1_-_1293914 AK304615 AK225028 BC006213 BC017312 NM_032348 AY358391 AK027269 AK293442 AK315510	-13696	-	TSC_hg19_v1_chr1_-_1284799 AK095867	-22838	-	AK293286 CU690690 AF006011 AB385564 BC025292 NM_004421 BC050454 TSC_hg19_v1_chr1_-_1284533	-23206	-	TSC_hg19_v1_chr1_-_1310537 BC035595	2913	-	TSC_hg19_v1_chr1_-_1310563 NM_001127230 AK000615 NM_001127229 BC062333	2952	-	NM_017900 TSC_hg19_v1_chr1_-_1310902	3242	-	AK304615|MXRA8|54587|matrix-remodelling associated 8##AK225028|MXRA8|54587|matrix-remodelling associated 8##BC006213|MXRA8|54587|matrix-remodelling associated 8##BC017312|MXRA8|54587|matrix-remodelling associated 8##NM_032348|MXRA8|54587|matrix-remodelling associated 8##AY358391|MXRA8|54587|matrix-remodelling associated 8##AK027269|MXRA8|54587|matrix-remodelling associated 8##AK293442|MXRA8|54587|matrix-remodelling associated 8##AK315510|MXRA8|54587|matrix-remodelling associated 8##AK095867|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##AK293286|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##AF006011|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##BC025292|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##NM_004421|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##BC050454|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##BC035595|AURKAIP1|54998|aurora kinase A interacting protein 1##NM_001127230|AURKAIP1|54998|aurora kinase A interacting protein 1##AK000615|AURKAIP1|54998|aurora kinase A interacting protein 1##NM_001127229|AURKAIP1|54998|aurora kinase A interacting protein 1##BC062333|AURKAIP1|54998|aurora kinase A interacting protein 1##NM_017900|AURKAIP1|54998|aurora kinase A interacting protein 1	0.96222	CTCF.p2:-6:0.948
chr3	185072023	185072144	reg1006576.p1	10.871	+	AK302951 TSC_hg19_v1_chr3_+_185046682 BC031677	-25392	+	TSC_hg19_v1_chr3_+_185000783 NM_001242314 NM_001242317 AK297646 BC036593 AK312714 BC015996	-71334	+	BC038948 BC110460 L07077 AK301521 TSC_hg19_v1_chr3_-_184971838 AK223460 AK291798 BC011030 BC030982 NM_001166415 NM_001966	-100233	-	BC026249 NM_004721 AK296961 AB001872 BC111726	8849	+	TSC_hg19_v1_chr3_-_185216824 EU831805 EU831882 AK313954 BC019884 BC008043 BX647928 AY358547 AK172748 AK290878 NM_080652	144616	-	CU687970 TSC_hg19_v1_chr3_-_185270374 AK298380 AY036912 AY093498 EF186228 EF186229 BC064941 AK122651 NM_139248	198245	-	AK302951|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC031677|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_001242314|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_001242317|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK297646|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC036593|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK312714|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC015996|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##EU831805|TMEM41A|90407|transmembrane protein 41A##EU831882|TMEM41A|90407|transmembrane protein 41A##AK313954|TMEM41A|90407|transmembrane protein 41A##BC019884|TMEM41A|90407|transmembrane protein 41A##BC008043|TMEM41A|90407|transmembrane protein 41A##BX647928|TMEM41A|90407|transmembrane protein 41A##AY358547|TMEM41A|90407|transmembrane protein 41A##AK172748|TMEM41A|90407|transmembrane protein 41A##AK290878|TMEM41A|90407|transmembrane protein 41A##NM_080652|TMEM41A|90407|transmembrane protein 41A##AK298380|LIPH|200879|lipase, member H##AY036912|LIPH|200879|lipase, member H##AY093498|LIPH|200879|lipase, member H##EF186228|LIPH|200879|lipase, member H##EF186229|LIPH|200879|lipase, member H##BC064941|LIPH|200879|lipase, member H##AK122651|LIPH|200879|lipase, member H##NM_139248|LIPH|200879|lipase, member H	0.660439	CTCF.p2:-8:0.660
chr15	72963004	72963119	reg1006936.p1	10.870	+	NM_018652	-16024	+	TSC_hg19_v1_chr15_+_72766706 AB209432 BC051877	-196345	+	TSC_hg19_v1_chr15_+_72766670 AJ243190 NM_005744 AK312715	-196394	+	NM_001252678 NM_033028 TSC_hg19_v1_chr15_+_72978547 AK303706 AF359281 AK298922 AK314507 BX647855 BC027624 AK075321 AK302224 AB528022 DQ891519 DQ894709	15482	+	BC037410 TSC_hg19_v1_chr15_-_73051778	88653	-	TSC_hg19_v1_chr15_-_73076054 CU675251 EU831454 EU831541 BC018074	112979	-	NM_018652|GOLGA6B|55889|golgin A6 family, member B##AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##NM_001252678|BBS4|585|Bardet-Biedl syndrome 4##NM_033028|BBS4|585|Bardet-Biedl syndrome 4##AK303706|BBS4|585|Bardet-Biedl syndrome 4##AF359281|BBS4|585|Bardet-Biedl syndrome 4##AK298922|BBS4|585|Bardet-Biedl syndrome 4##AK314507|BBS4|585|Bardet-Biedl syndrome 4##BX647855|BBS4|585|Bardet-Biedl syndrome 4##BC027624|BBS4|585|Bardet-Biedl syndrome 4##AK075321|BBS4|585|Bardet-Biedl syndrome 4##AK302224|BBS4|585|Bardet-Biedl syndrome 4##DQ891519|BBS4|585|Bardet-Biedl syndrome 4##DQ894709|BBS4|585|Bardet-Biedl syndrome 4##EU831454|ADPGK|83440|ADP-dependent glucokinase##EU831541|ADPGK|83440|ADP-dependent glucokinase##BC018074|ADPGK|83440|ADP-dependent glucokinase	0.925843	CTCF.p2:1:0.926
chr5	95949853	95949998	reg1009123.p1	10.870	+	AB208874 AB590528 BC130295 BC136486 TSC_hg19_v1_chr5_-_95768927 X64810 M90753 BC031211 NM_000439	-181103	-	AK303888 NM_001177875	-182063	-	AK308575 NM_001177876	-201237	-	TSC_hg19_v1_chr5_+_95997755 NM_001190442 AB208816	47826	+	TSC_hg19_v1_chr5_+_95997965 BC016066 NM_001042440	48003	+	BC013579 TSC_hg19_v1_chr5_+_95998220	48270	+	AB208874|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC130295|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC136486|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##X64810|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##M90753|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC031211|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_000439|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AK303888|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177875|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001190442|CAST|831|calpastatin##AB208816|CAST|831|calpastatin##BC016066|CAST|831|calpastatin##NM_001042440|CAST|831|calpastatin##BC013579|CAST|831|calpastatin	0.998103	CTCF.p2:-24:0.998
chr6	127963281	127963385	reg1009113.p1	10.870	+	AK303850 BC062712 NM_001010905	-65015	+	NM_001012279	-122834	-	NM_014702	-182799	-	AK292046 AK097903 BC144034 BC130516 NM_001010923 NM_001164685	258867	-	AK124031 NM_001164687	276425	-	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	878323	-	AK303850|C6orf58|352999|chromosome 6 open reading frame 58##BC062712|C6orf58|352999|chromosome 6 open reading frame 58##NM_001010905|C6orf58|352999|chromosome 6 open reading frame 58##NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174##NM_014702|KIAA0408|9729|KIAA0408##AK292046|THEMIS|387357|thymocyte selection associated##AK097903|THEMIS|387357|thymocyte selection associated##BC144034|THEMIS|387357|thymocyte selection associated##BC130516|THEMIS|387357|thymocyte selection associated##NM_001010923|THEMIS|387357|thymocyte selection associated##NM_001164685|THEMIS|387357|thymocyte selection associated##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	0.0158	
chr6	129993022	129993166	reg1009478.p1	10.870	+	NM_000426 NM_001079823 Z26653	-788781	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-1151438	-	AK124031 NM_001164687	-1753336	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	38232	-	NM_001010876	189321	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	346631	+	NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	0.292012	CTCF.p2:-19:0.292
chr9	92044294	92044435	reg1007576.p1	10.870	+	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-110946	+	TSC_hg19_v1_chr9_+_91926112 NM_001827 X54942 BC006458 AB527990 BT006630 CR407630 CR542118	-118206	+	BC026314 NM_016848 TSC_hg19_v1_chr9_-_91793734	-250654	-	BC054500 NM_001142287 NM_006378	50246	-	BX648216 TSC_hg19_v1_chr9_-_92113005	68643	-	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	175617	+	AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2##X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma	0.354246	CTCF.p2:-93:0.300
chr11	15671662	15671803	reg1011538.p1	10.869	+	AB236158 NM_001042536	-535249	+	AB236159 NM_001031853	-537763	+	BC008428 AK291188 BC092468 NM_000728	-576606	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	752669	-	BC037866 NM_001145811	758695	-	AF309034 NM_033326	826193	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	0.898449	CTCF.p2:-7:0.898
chr1	171954143	171954261	reg1010219.p1	10.869	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-143499	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-203364	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-203388	+	AL035295 NM_139240 BC038410	435626	+	TSC_hg19_v1_chr1_-_172413202 BC006539	458986	-	TSC_hg19_v1_chr1_-_172413207 AK308201	459005	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.996936	CTCF.p2:4:0.997
chr15	76025268	76025396	reg1011913.p1	10.869	+	TSC_hg19_v1_chr15_+_76016306 BC039862 NM_175881	-9018	+	TSC_hg19_v1_chr15_-_76005190 NM_001897	-20137	-	AB462981 AY359468 X96753 TSC_hg19_v1_chr15_-_76005157	-20204	-	TSC_hg19_v1_chr15_-_76030959 AK091244	5637	-	NM_173469 TSC_hg19_v1_chr15_+_76135647 AK000617	110303	+	TSC_hg19_v1_chr15_+_76135787 BC017708 AL832429	110460	+	BC039862|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_175881|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_001897|CSPG4|1464|chondroitin sulfate proteoglycan 4##AY359468|CSPG4|1464|chondroitin sulfate proteoglycan 4##X96753|CSPG4|1464|chondroitin sulfate proteoglycan 4##AK091244|DNM1P35|100128285|DNM1 pseudogene 35##NM_173469|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK000617|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##BC017708|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AL832429|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2	0.0	
chr6	99915527	99915662	reg1010911.p1	10.869	+	BC019074 AJ420570 BC064640 TSC_hg19_v1_chr6_-_99873180 BC042850 BX648520 BC007791 AF314186 BC052638 BC064413 AK027759 BC012780 BC107700 AK027898 AK027658 AK074628 NM_015491 NM_032870	-42427	-	TSC_hg19_v1_chr6_+_99872794 BC029846 BC047485 AK025621	-42780	+	AF314185 TSC_hg19_v1_chr6_-_99849313 AL080186	-66303	-	TSC_hg19_v1_chr6_-_99963261 NM_001080481 AK310643	47675	-	TSC_hg19_v1_chr6_-_99963309 BC005991	47716	-	TSC_hg19_v1_chr6_+_99968921 BX647075 NM_001195131	53305	+	BC019074|PNISR|25957|PNN-interacting serine/arginine-rich protein##AJ420570|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC064640|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC042850|PNISR|25957|PNN-interacting serine/arginine-rich protein##BX648520|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC007791|PNISR|25957|PNN-interacting serine/arginine-rich protein##AF314186|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC052638|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC064413|PNISR|25957|PNN-interacting serine/arginine-rich protein##AK027759|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC012780|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC107700|PNISR|25957|PNN-interacting serine/arginine-rich protein##AK027898|PNISR|25957|PNN-interacting serine/arginine-rich protein##AK027658|PNISR|25957|PNN-interacting serine/arginine-rich protein##AK074628|PNISR|25957|PNN-interacting serine/arginine-rich protein##NM_015491|PNISR|25957|PNN-interacting serine/arginine-rich protein##NM_032870|PNISR|25957|PNN-interacting serine/arginine-rich protein##AF314185|PNISR|25957|PNN-interacting serine/arginine-rich protein##AL080186|PNISR|25957|PNN-interacting serine/arginine-rich protein##NM_001080481|USP45|85015|ubiquitin specific peptidase 45##AK310643|USP45|85015|ubiquitin specific peptidase 45##BC005991|USP45|85015|ubiquitin specific peptidase 45##BX647075|LOC100130890|100130890|uncharacterized LOC100130890##NM_001195131|LOC100130890|100130890|uncharacterized LOC100130890	0.986543	CTCF.p2:-12:0.987
chr19	13215438	13215578	reg1009575.p1	10.868	+	NM_005583	-1535	-	TSC_hg19_v1_chr19_-_13213673 BC002796	-1811	-	TSC_hg19_v1_chr19_-_13213530 AK311530 M22637	-1982	-	AF196479 AB590553 CU676232 CU677996 BC002492 BC040126 BC018302 NM_001142554 NM_017722 TSC_hg19_v1_chr19_-_13227551 AK000251 AK304636 AK295245 AK292377 NM_001136035	11885	-	TSC_hg19_v1_chr19_+_13229102 NM_052876 BC055396 AF395817	13617	+	TSC_hg19_v1_chr19_+_13250072 AK123056	34609	+	NM_005583|LYL1|4066|lymphoblastic leukemia derived sequence 1##BC002796|LYL1|4066|lymphoblastic leukemia derived sequence 1##M22637|LYL1|4066|lymphoblastic leukemia derived sequence 1##AF196479|TRMT1|55621|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)##BC002492|TRMT1|55621|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)##BC040126|TRMT1|55621|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)##BC018302|TRMT1|55621|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)##NM_001142554|TRMT1|55621|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)##NM_017722|TRMT1|55621|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)##AK000251|TRMT1|55621|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)##AK304636|TRMT1|55621|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)##AK295245|TRMT1|55621|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)##AK292377|TRMT1|55621|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)##NM_001136035|TRMT1|55621|TRM1 tRNA methyltransferase 1 homolog (S. cerevisiae)##NM_052876|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing##BC055396|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing##AF395817|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing##AK123056|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing	0.0	
chr16	231520	231637	reg1010428.p1	10.867	+	NM_005331 BC056686	-1179	+	AK223392 BC005931 NM_000558 BC101846 BC101848 AF349571 BC032122 BC050661 AF105974 DQ891761 DQ893109 DQ894945 DQ896383 AB590168	-4883	+	NM_000517 V00493 AF097635 BC008572 AF147332 DQ891761 DQ893109 DQ894945 DQ896383 AB590168	-8701	+	TSC_hg19_v1_chr16_-_279124 AK309376	47558	-	CU678436 AB528653 TSC_hg19_v1_chr16_-_279416 BC065198 AJ404326 AK001093 BX647161 AK223084 BC003194 AY005111 NM_018032 NM_201412	47832	-	TSC_hg19_v1_chr16_+_284828 AK310766 AK057165 NM_032039	53235	+	NM_005331|HBQ1|3049|hemoglobin, theta 1##BC056686|HBQ1|3049|hemoglobin, theta 1##AK223392|HBA1|3039|hemoglobin, alpha 1##BC005931|HBA1|3039|hemoglobin, alpha 1##NM_000558|HBA1|3039|hemoglobin, alpha 1##BC101846|HBA1|3039|hemoglobin, alpha 1##BC101848|HBA1|3039|hemoglobin, alpha 1##AF349571|HBA1|3039|hemoglobin, alpha 1##BC032122|HBA1|3039|hemoglobin, alpha 1##BC050661|HBA1|3039|hemoglobin, alpha 1##AF105974|HBA1|3039|hemoglobin, alpha 1##DQ891761|HBA2|3040|hemoglobin, alpha 2##DQ893109|HBA2|3040|hemoglobin, alpha 2##DQ894945|HBA1|3039|hemoglobin, alpha 1##DQ896383|HBA1|3039|hemoglobin, alpha 1##NM_000517|HBA2|3040|hemoglobin, alpha 2##V00493|HBA1|3039|hemoglobin, alpha 1##AF097635|HBA1|3039|hemoglobin, alpha 1##BC008572|HBA1|3039|hemoglobin, alpha 1##AF147332|HBA1|3039|hemoglobin, alpha 1##DQ891761|HBA2|3040|hemoglobin, alpha 2##DQ893109|HBA2|3040|hemoglobin, alpha 2##DQ894945|HBA1|3039|hemoglobin, alpha 1##DQ896383|HBA1|3039|hemoglobin, alpha 1##BC065198|LUC7L|55692|LUC7-like (S. cerevisiae)##AJ404326|LUC7L|55692|LUC7-like (S. cerevisiae)##AK001093|LUC7L|55692|LUC7-like (S. cerevisiae)##BX647161|LUC7L|55692|LUC7-like (S. cerevisiae)##AK223084|LUC7L|55692|LUC7-like (S. cerevisiae)##BC003194|LUC7L|55692|LUC7-like (S. cerevisiae)##AY005111|LUC7L|55692|LUC7-like (S. cerevisiae)##NM_018032|LUC7L|55692|LUC7-like (S. cerevisiae)##NM_201412|LUC7L|55692|LUC7-like (S. cerevisiae)##AK310766|ITFG3|83986|integrin alpha FG-GAP repeat containing 3##AK057165|ITFG3|83986|integrin alpha FG-GAP repeat containing 3##NM_032039|ITFG3|83986|integrin alpha FG-GAP repeat containing 3	0.653769	CTCF.p2:1:0.654
chr18	30294644	30294776	reg1011709.p1	10.867	+	AL834491 BC121067 BC121068 AK025263 NM_001242409 NM_022751	-244290	-	TSC_hg19_v1_chr18_-_29993196 D28353	-301515	-	AY695931 NM_005925 X81333 TSC_hg19_v1_chr18_+_29770001 BC136559 BC144244	-524713	+	BC021267 AB037805 NM_020805	58197	-	BC130535 BC144178 BC144179 NM_001105528	725302	-	BC062719 BC091517 AK126038 NM_198995	725949	-	AL834491|FAM59A|64762|family with sequence similarity 59, member A##BC121067|FAM59A|64762|family with sequence similarity 59, member A##BC121068|FAM59A|64762|family with sequence similarity 59, member A##AK025263|FAM59A|64762|family with sequence similarity 59, member A##NM_001242409|FAM59A|64762|family with sequence similarity 59, member A##NM_022751|FAM59A|64762|family with sequence similarity 59, member A##AY695931|MEP1B|4225|meprin A, beta##NM_005925|MEP1B|4225|meprin A, beta##X81333|MEP1B|4225|meprin A, beta##BC136559|MEP1B|4225|meprin A, beta##BC144244|MEP1B|4225|meprin A, beta##BC021267|KLHL14|57565|kelch-like 14 (Drosophila)##AB037805|KLHL14|57565|kelch-like 14 (Drosophila)##NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)##BC130535|C18orf34|374864|chromosome 18 open reading frame 34##BC144178|C18orf34|374864|chromosome 18 open reading frame 34##BC144179|C18orf34|374864|chromosome 18 open reading frame 34##NM_001105528|C18orf34|374864|chromosome 18 open reading frame 34##BC062719|C18orf34|374864|chromosome 18 open reading frame 34##BC091517|C18orf34|374864|chromosome 18 open reading frame 34##AK126038|C18orf34|374864|chromosome 18 open reading frame 34##NM_198995|C18orf34|374864|chromosome 18 open reading frame 34	0.257638	CTCF.p2:-8:0.258
chr2	221552088	221552210	reg1009035.p1	10.867	+	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-1059795	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-1089560	+	M13981 NM_002191 BC039076 BC006391 TSC_hg19_v1_chr2_+_220437031 BT006954 CU675381 DQ890602 DQ893773 M13144	-1115103	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	884861	-	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	1606871	-	AK057009 NM_153038 BC109388	1610763	+	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##M13981|INHA|3623|inhibin, alpha##NM_002191|INHA|3623|inhibin, alpha##BC039076|INHA|3623|inhibin, alpha##BC006391|INHA|3623|inhibin, alpha##BT006954|INHA|3623|inhibin, alpha##DQ890602|INHA|3623|inhibin, alpha##DQ893773|INHA|3623|inhibin, alpha##M13144|INHA|3623|inhibin, alpha##BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140	0.753619	CTCF.p2:-18:0.614
chr22	26276633	26276771	reg1010402.p1	10.867	+	TSC_hg19_v1_chr22_+_26138168 AY077700	-138518	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	-138582	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-315756	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	288735	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	288795	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	288961	+	AY077700|MYO18B|84700|myosin XVIIIB##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.012784	
chr4	187218300	187218439	reg1010981.p1	10.866	+	TSC_hg19_v1_chr4_+_187187342 AK313195 BC029374 BC119014 BC122863 M13142 AF045649	-30990	+	NM_000128 BC020617	-31248	+	AK292624 AK297672 M13143 NM_000892 AK313378 BC117349 BC117351 BC143911	-69701	+	EU432127 AB464620 HQ258378 BC074946 BC074947 NM_005958 U14108 TSC_hg19_v1_chr4_-_187476657 BC126297 BC126299	258250	-	TSC_hg19_v1_chr4_-_187527219 BC172774	308913	-	TSC_hg19_v1_chr4_-_187644994 NM_005245 X87241	426622	-	AK313195|F11|2160|coagulation factor XI##BC029374|F11|2160|coagulation factor XI##BC119014|F11|2160|coagulation factor XI##BC122863|F11|2160|coagulation factor XI##M13142|F11|2160|coagulation factor XI##AF045649|F11|2160|coagulation factor XI##NM_000128|F11|2160|coagulation factor XI##BC020617|F11|2160|coagulation factor XI##AK292624|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##AK297672|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##M13143|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##NM_000892|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##AK313378|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##BC117349|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##BC117351|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##BC143911|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##EU432127|MTNR1A|4543|melatonin receptor 1A##HQ258378|MTNR1A|4543|melatonin receptor 1A##BC074946|MTNR1A|4543|melatonin receptor 1A##BC074947|MTNR1A|4543|melatonin receptor 1A##NM_005958|MTNR1A|4543|melatonin receptor 1A##U14108|MTNR1A|4543|melatonin receptor 1A##BC126297|MTNR1A|4543|melatonin receptor 1A##BC126299|MTNR1A|4543|melatonin receptor 1A##NM_005245|FAT1|2195|FAT tumor suppressor homolog 1 (Drosophila)##X87241|FAT1|2195|FAT tumor suppressor homolog 1 (Drosophila)	0.975482	CTCF.p2:-12:0.975
chr17	42021482	42021596	reg1009024.p1	10.865	+	X00491 NM_002722	-1723	-	BC030287 CR936730 NM_005374 AK311166	-36420	-	AL136554 X82895 TSC_hg19_v1_chr17_-_41984895 AK299518 AK223560 AK294564 AK299286	-36644	-	BC041057 NM_004160	60297	-	AK314432 AK300923 BC111713 AY116538 NM_153006 AK074407	60479	+	CU675657 AB097008 AK130810 AK313855 TSC_hg19_v1_chr17_-_42092332 BC007438 NM_032376 AK172826 AK294237	70827	-	X00491|PPY|5539|pancreatic polypeptide##NM_002722|PPY|5539|pancreatic polypeptide##BC030287|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##CR936730|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##NM_005374|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK311166|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AL136554|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299518|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK223560|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK294564|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299286|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##BC041057|PYY|5697|peptide YY##NM_004160|PYY|5697|peptide YY##AK314432|NAGS|162417|N-acetylglutamate synthase##AK300923|NAGS|162417|N-acetylglutamate synthase##BC111713|NAGS|162417|N-acetylglutamate synthase##AY116538|NAGS|162417|N-acetylglutamate synthase##NM_153006|NAGS|162417|N-acetylglutamate synthase##AK074407|NAGS|162417|N-acetylglutamate synthase##AB097008|TMEM101|84336|transmembrane protein 101##AK130810|TMEM101|84336|transmembrane protein 101##AK313855|TMEM101|84336|transmembrane protein 101##BC007438|TMEM101|84336|transmembrane protein 101##NM_032376|TMEM101|84336|transmembrane protein 101##AK172826|TMEM101|84336|transmembrane protein 101##AK294237|TMEM101|84336|transmembrane protein 101	0.998298	CTCF.p2:-7:0.998
chr17	42942643	42942765	reg1009226.p2	10.865	+	BC020667 NM_016438	-17426	+	NM_001080383	-34526	-	NM_005497 TSC_hg19_v1_chr17_-_42907633	-35064	-	AK128148 AK225335 TSC_hg19_v1_chr17_-_42976764 AK293108 BC002360	34046	-	TSC_hg19_v1_chr17_-_42976775 AK302828 D21163	34078	-	TSC_hg19_v1_chr17_-_42976800 AK296367 AK297392 AK316098	34104	-	BC020667|HIGD1B|51751|HIG1 hypoxia inducible domain family, member 1B##NM_016438|HIGD1B|51751|HIG1 hypoxia inducible domain family, member 1B##NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa##NM_005497|GJC1|10052|gap junction protein, gamma 1, 45kDa##AK128148|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK225335|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK293108|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##BC002360|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK302828|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##D21163|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK296367|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK297392|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK316098|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2	0.997602	CTCF.p2:-2:0.998
chr22	28282646	28282772	reg1008916.p1	10.865	+	TSC_hg19_v1_chr22_-_28197481 NM_002430 X82209	-85232	-	TSC_hg19_v1_chr22_+_27068725 AK026502	-1213969	+	TSC_hg19_v1_chr22_+_27053392 AB263414 AB263415 AB263416 AB263417 AK098833	-1229237	+	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	32465	-	TSC_hg19_v1_chr22_-_28315203 BC031427	32498	-	TSC_hg19_v1_chr22_-_28315245 BC018704 D30037 AK313064 CR456541 NM_012399	32555	-	NM_002430|MN1|4330|meningioma (disrupted in balanced translocation) 1##X82209|MN1|4330|meningioma (disrupted in balanced translocation) 1##AK026502|LOC100507637|100507637|uncharacterized LOC100507637##AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta##D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta##CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta	0.099811	
chr3	6841101	6841233	reg1010643.p1	10.865	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-1611676	+	TSC_hg19_v1_chr3_+_5229430 D86967	-1611734	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	-1611804	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	61632	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	61731	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	1702163	-	DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK124088|LOC100288428|100288428|uncharacterized LOC100288428	0.99341	CTCF.p2:11:0.993
chr5	135223188	135223306	reg1009288.p1	10.865	+	AK126812 NM_145282 BC025747	-52858	+	NM_004887	-308279	-	AF086340 AF073957 AF144103 BT007080 AB528117 AM392840 AF106911 BC003513 AY358906 TSC_hg19_v1_chr5_-_134914682 AB543622 AK075514	-308674	-	CU688130 BC066283 BC066284 BC066285 BC066286 BC066287 M30134 NM_000590 S63356 X17543	8262	-	TSC_hg19_v1_chr5_+_135266044 NM_012159 BC044938	42793	+	AB590696 BC093670 BC101579 AK314092 D63521 NM_002302	67374	-	AK126812|SLC25A48|153328|solute carrier family 25, member 48##NM_145282|SLC25A48|153328|solute carrier family 25, member 48##BC025747|SLC25A48|153328|solute carrier family 25, member 48##NM_004887|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF086340|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF073957|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF144103|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BT007080|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AM392840|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF106911|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BC003513|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AY358906|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AB543622|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AK075514|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BC066283|IL9|3578|interleukin 9##BC066284|IL9|3578|interleukin 9##BC066285|IL9|3578|interleukin 9##BC066286|IL9|3578|interleukin 9##BC066287|IL9|3578|interleukin 9##M30134|IL9|3578|interleukin 9##NM_000590|IL9|3578|interleukin 9##S63356|IL9|3578|interleukin 9##X17543|IL9|3578|interleukin 9##NM_012159|FBXL21|26223|F-box and leucine-rich repeat protein 21 (gene/pseudogene)##BC044938|FBXL21|26223|F-box and leucine-rich repeat protein 21 (gene/pseudogene)##BC093670|LECT2|3950|leukocyte cell-derived chemotaxin 2##BC101579|LECT2|3950|leukocyte cell-derived chemotaxin 2##AK314092|LECT2|3950|leukocyte cell-derived chemotaxin 2##D63521|LECT2|3950|leukocyte cell-derived chemotaxin 2##NM_002302|LECT2|3950|leukocyte cell-derived chemotaxin 2	0.967135	CTCF.p2:-5:0.967
chr8	144465867	144465998	reg1009554.p1	10.865	+	TSC_hg19_v1_chr8_+_144451016 NM_052924 BC012135 BC025767 AB528055 AY082588 CU693058 AB067516	-14842	+	AF349017 NM_052963 TSC_hg19_v1_chr8_-_144417051	-48877	-	TSC_hg19_v1_chr8_-_144417034 AK303237 AK315913 AK308475 AK311647 BC071914 BC044646 BC052285	-48917	-	NM_201589	46669	-	D63484 TSC_hg19_v1_chr8_-_144623602 BC038670	157659	-	TSC_hg19_v1_chr8_-_144623640 NM_015117	157700	-	NM_052924|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC012135|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC025767|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AY082588|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AB067516|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AF349017|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_052963|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK303237|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK315913|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK308475|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK311647|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC071914|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC044646|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC052285|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_201589|MAFA|389692|v-maf musculoaponeurotic fibrosarcoma oncogene homolog A (avian)##D63484|ZC3H3|23144|zinc finger CCCH-type containing 3##BC038670|ZC3H3|23144|zinc finger CCCH-type containing 3##NM_015117|ZC3H3|23144|zinc finger CCCH-type containing 3	0.999349	CTCF.p2:0:0.999
chr9	111524169	111524307	reg1011012.p1	10.865	+	TSC_hg19_v1_chr9_-_110252048 NM_004235	-1272192	-	AF105036 AF022184 TSC_hg19_v1_chr9_-_110251847 U70663	-1272398	-	HM026463 CU688792 CU689020 DQ891793 DQ894975 AB385001 TSC_hg19_v1_chr9_-_110251402 BC030811 BC029923 AK313489	-1272790	-	CU689742 TSC_hg19_v1_chr9_-_111618267 BC033789 AK313871 NM_006686	94003	-	BC014610 AK314981 NM_006687	100335	+	BC033094 TSC_hg19_v1_chr9_-_111696232 CR749385 AK304742	172003	-	NM_004235|KLF4|9314|Kruppel-like factor 4 (gut)##AF105036|KLF4|9314|Kruppel-like factor 4 (gut)##AF022184|KLF4|9314|Kruppel-like factor 4 (gut)##U70663|KLF4|9314|Kruppel-like factor 4 (gut)##HM026463|KLF4|9314|Kruppel-like factor 4 (gut)##DQ891793|KLF4|9314|Kruppel-like factor 4 (gut)##DQ894975|KLF4|9314|Kruppel-like factor 4 (gut)##BC030811|KLF4|9314|Kruppel-like factor 4 (gut)##BC029923|KLF4|9314|Kruppel-like factor 4 (gut)##AK313489|KLF4|9314|Kruppel-like factor 4 (gut)##BC033789|ACTL7B|10880|actin-like 7B##AK313871|ACTL7B|10880|actin-like 7B##NM_006686|ACTL7B|10880|actin-like 7B##BC014610|ACTL7A|10881|actin-like 7A##AK314981|ACTL7A|10881|actin-like 7A##NM_006687|ACTL7A|10881|actin-like 7A##BC033094|IKBKAP|8518|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein##CR749385|IKBKAP|8518|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein##AK304742|IKBKAP|8518|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein	0.060012	
chr9	27548275	27548385	reg1008957.p1	10.865	+	TSC_hg19_v1_chr9_-_27529809 AL832572 BC033027 AK023266 NM_024761	-18680	-	AF146759 AF315688 NM_020124 AY358855 AB463795	-24008	+	BC137351 BC137352 BC144602 BC014307 AJ278482 NM_001161585 NM_020641	-251209	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	25141	-	AK057806 JN681271 NM_145005	25511	-	AK056372 NM_152570	1170972	-	AL832572|MOB3B|79817|MOB kinase activator 3B##BC033027|MOB3B|79817|MOB kinase activator 3B##AK023266|MOB3B|79817|MOB kinase activator 3B##NM_024761|MOB3B|79817|MOB kinase activator 3B##AF146759|IFNK|56832|interferon, kappa##AF315688|IFNK|56832|interferon, kappa##NM_020124|IFNK|56832|interferon, kappa##AY358855|IFNK|56832|interferon, kappa##BC137351|C9orf11|54586|chromosome 9 open reading frame 11##BC137352|C9orf11|54586|chromosome 9 open reading frame 11##BC144602|C9orf11|54586|chromosome 9 open reading frame 11##BC014307|C9orf11|54586|chromosome 9 open reading frame 11##AJ278482|C9orf11|54586|chromosome 9 open reading frame 11##NM_001161585|C9orf11|54586|chromosome 9 open reading frame 11##NM_020641|C9orf11|54586|chromosome 9 open reading frame 11##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2	0.951544	CTCF.p2:26:0.952
chr1	221047699	221047826	reg1006787.p1	10.864	+	NM_022746 TSC_hg19_v1_chr1_+_220960254 AK026043 AK225416 AK094105 AK290812 BC010619	-87599	+	TSC_hg19_v1_chr1_+_220921664 AL136931 BC011973 NM_017898 BC016859	-126118	+	NM_024709 TSC_hg19_v1_chr1_+_220863727 BC036067 AK091937 AK056749 AK056749 AK024208	-184060	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	4999	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	5152	+	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	5337	+	NM_022746|MARC1|64757|mitochondrial amidoxime reducing component 1##AK026043|MARC1|64757|mitochondrial amidoxime reducing component 1##AK225416|MARC1|64757|mitochondrial amidoxime reducing component 1##AK094105|MARC1|64757|mitochondrial amidoxime reducing component 1##AK290812|MARC1|64757|mitochondrial amidoxime reducing component 1##BC010619|MARC1|64757|mitochondrial amidoxime reducing component 1##AL136931|MARC2|54996|mitochondrial amidoxime reducing component 2##BC011973|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_017898|MARC2|54996|mitochondrial amidoxime reducing component 2##BC016859|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_024709|C1orf115|79762|chromosome 1 open reading frame 115##BC036067|C1orf115|79762|chromosome 1 open reading frame 115##AK091937|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK024208|C1orf115|79762|chromosome 1 open reading frame 115##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox	0.959435	CTCF.p2:-28:0.959
chr13	101167183	101167312	reg1008885.p1	10.864	+	NM_000282 NM_001127692 NM_001178004 TSC_hg19_v1_chr13_+_100741349 AF385926 AK298318 AK225288 AK225299 AK296771 AK315503 BC000140 X14608	-425888	+	TSC_hg19_v1_chr13_+_100634271 AF104902 AF193855	-532960	+	TSC_hg19_v1_chr13_+_100634037 NM_007129	-533227	+	AK091974 BC001077 BC004360 NM_033110	18752	-	TSC_hg19_v1_chr13_-_101241029 AK095850 NM_001195087	73780	-	AK299859 TSC_hg19_v1_chr13_-_101327050 BX648008 AK056409 AK290345 BX647956	159809	-	NM_000282|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##NM_001127692|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##NM_001178004|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AF385926|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK298318|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK225288|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK225299|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK296771|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK315503|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##BC000140|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##X14608|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AF104902|ZIC2|7546|Zic family member 2##AF193855|ZIC2|7546|Zic family member 2##NM_007129|ZIC2|7546|Zic family member 2##AK091974|A2LD1|87769|AIG2-like domain 1##BC001077|A2LD1|87769|AIG2-like domain 1##BC004360|A2LD1|87769|AIG2-like domain 1##NM_033110|A2LD1|87769|AIG2-like domain 1##AK095850|A2LD1|87769|AIG2-like domain 1##NM_001195087|A2LD1|87769|AIG2-like domain 1##AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	0.998305	CTCF.p2:28:0.998
chr3	186332760	186332875	reg1009031.p1	10.864	+	TSC_hg19_v1_chr3_+_186330872 BC048198 BC052590 M16961 AB527879 CU690918 D67012	-1873	+	TSC_hg19_v1_chr3_+_186330850 NM_001622 AK298447 AK312969 AK292751	-1968	+	AK303754 TSC_hg19_v1_chr3_+_186330817	-2049	+	AF534529 AJ242928 NM_014375 AB017551 BC069670 BC069820 BC114616 BC074734 AY373820 AY373821 AK309647	25448	+	AK313381 BC069574 NM_000412 BC150591	50967	+	NM_000893 NM_001102416 NM_001166451 AK303768 AK298440 AK315230 AK290839 BC060039 TSC_hg19_v1_chr3_+_186435263 K02566 BC026253 CU687392	102396	+	BC048198|AHSG|197|alpha-2-HS-glycoprotein##BC052590|AHSG|197|alpha-2-HS-glycoprotein##M16961|AHSG|197|alpha-2-HS-glycoprotein##D67012|AHSG|197|alpha-2-HS-glycoprotein##NM_001622|AHSG|197|alpha-2-HS-glycoprotein##AK298447|AHSG|197|alpha-2-HS-glycoprotein##AK312969|AHSG|197|alpha-2-HS-glycoprotein##AK292751|AHSG|197|alpha-2-HS-glycoprotein##AK303754|AHSG|197|alpha-2-HS-glycoprotein##AF534529|FETUB|26998|fetuin B##AJ242928|FETUB|26998|fetuin B##NM_014375|FETUB|26998|fetuin B##AB017551|FETUB|26998|fetuin B##BC069670|FETUB|26998|fetuin B##BC069820|FETUB|26998|fetuin B##BC114616|FETUB|26998|fetuin B##BC074734|FETUB|26998|fetuin B##AY373820|FETUB|26998|fetuin B##AY373821|FETUB|26998|fetuin B##AK309647|FETUB|26998|fetuin B##AK313381|HRG|3273|histidine-rich glycoprotein##BC069574|HRG|3273|histidine-rich glycoprotein##NM_000412|HRG|3273|histidine-rich glycoprotein##BC150591|HRG|3273|histidine-rich glycoprotein##NM_000893|KNG1|3827|kininogen 1##NM_001102416|KNG1|3827|kininogen 1##NM_001166451|KNG1|3827|kininogen 1##AK303768|KNG1|3827|kininogen 1##AK298440|KNG1|3827|kininogen 1##AK315230|KNG1|3827|kininogen 1##AK290839|KNG1|3827|kininogen 1##BC060039|KNG1|3827|kininogen 1##K02566|KNG1|3827|kininogen 1##BC026253|KNG1|3827|kininogen 1	1.083105	CTCF.p2:13:0.998
chr6	144803380	144803477	reg1008600.p2	10.864	+	NM_007124 X69086	-190510	+	TSC_hg19_v1_chr6_+_144607461 AK292506	-195948	+	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	-331707	+	AK124757 TSC_hg19_v1_chr6_+_146056061	1252606	+	TSC_hg19_v1_chr6_-_146056437 AJ130763 AJ130764	1252985	-	AF454494 TSC_hg19_v1_chr6_-_146056628 AF454493 BC005286 AF084535	1253173	-	NM_007124|UTRN|7402|utrophin##X69086|UTRN|7402|utrophin##AK292506|UTRN|7402|utrophin##NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11##AK124757|LOC100507557|100507557|uncharacterized LOC100507557##AJ130763|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AJ130764|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454494|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454493|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##BC005286|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF084535|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	0.999179	CTCF.p2:2:0.999
chr15	42376698	42376812	reg1009122.p1	10.863	+	NM_001206670	-33855	-	AK074621 AK292634 TSC_hg19_v1_chr15_-_42264753 AK024902 NM_139265	-112002	-	TSC_hg19_v1_chr15_-_42264741 CU690850 DQ892745 DQ895991 BC077716 AF454953 BC006287 AF307137 AF323924 BC051823	-112039	-	AB527201 AB090876 NM_178034	9949	-	BC111481 BC035335 AK122623 BC142682 BC146648 BC131531 AK304368 AK172836 NM_213600	72048	-	TSC_hg19_v1_chr15_-_42500479 AF280814 CU686671 AM392538 AM393769 AB018313	123652	-	NM_001206670|PLA2G4E|123745|phospholipase A2, group IVE##AK074621|EHD4|30844|EH-domain containing 4##AK292634|EHD4|30844|EH-domain containing 4##AK024902|EHD4|30844|EH-domain containing 4##NM_139265|EHD4|30844|EH-domain containing 4##DQ892745|EHD4|30844|EH-domain containing 4##DQ895991|EHD4|30844|EH-domain containing 4##BC077716|EHD4|30844|EH-domain containing 4##AF454953|EHD4|30844|EH-domain containing 4##BC006287|EHD4|30844|EH-domain containing 4##AF307137|EHD4|30844|EH-domain containing 4##AF323924|EHD4|30844|EH-domain containing 4##BC051823|EHD4|30844|EH-domain containing 4##AB090876|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##NM_178034|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##BC111481|PLA2G4F|255189|phospholipase A2, group IVF##BC035335|PLA2G4F|255189|phospholipase A2, group IVF##AK122623|PLA2G4F|255189|phospholipase A2, group IVF##BC142682|PLA2G4F|255189|phospholipase A2, group IVF##BC146648|PLA2G4F|255189|phospholipase A2, group IVF##BC131531|PLA2G4F|255189|phospholipase A2, group IVF##AK304368|PLA2G4F|255189|phospholipase A2, group IVF##AK172836|PLA2G4F|255189|phospholipase A2, group IVF##NM_213600|PLA2G4F|255189|phospholipase A2, group IVF##AF280814|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AM392538|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AM393769|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AB018313|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)	0.77785	CTCF.p2:7:0.778
chr10	23582194	23582305	reg1009876.p1	10.861	+	AB463998 NM_178161	-100791	+	BC117471 BC130380 NM_012228 BC018030 TSC_hg19_v1_chr10_+_23384507 AF151889 BC066305 AF122004 EU446941	-197766	+	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	-365268	+	BC035732 NM_153714	51522	-	AB188491 NM_001145373 TSC_hg19_v1_chr10_+_23728216	145961	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	401428	+	NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a##BC117471|MSRB2|22921|methionine sulfoxide reductase B2##BC130380|MSRB2|22921|methionine sulfoxide reductase B2##NM_012228|MSRB2|22921|methionine sulfoxide reductase B2##BC018030|MSRB2|22921|methionine sulfoxide reductase B2##AF151889|MSRB2|22921|methionine sulfoxide reductase B2##BC066305|MSRB2|22921|methionine sulfoxide reductase B2##AF122004|MSRB2|22921|methionine sulfoxide reductase B2##EU446941|MSRB2|22921|methionine sulfoxide reductase B2##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67##AB188491|OTUD1|220213|OTU domain containing 1##NM_001145373|OTUD1|220213|OTU domain containing 1##AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217	0.0	
chr6	127442633	127442763	reg1011107.p1	10.861	+	NM_032784 AF251057	-2647	+	TSC_hg19_v1_chr6_+_127439818 BC022367	-2887	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	-781428	+	NM_001242851 NM_001242844 NM_001242849 NM_001242852 TSC_hg19_v1_chr6_+_127587982 NM_001242845 NM_001242846 NM_001242850 NM_030963	145206	+	TSC_hg19_v1_chr6_+_127588008 AK027558 AL136829 AX721119	145308	+	AK025796 NM_001139510	220853	-	NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3##BC022367|RSPO3|84870|R-spondin 3##BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##NM_001242851|RNF146|81847|ring finger protein 146##NM_001242844|RNF146|81847|ring finger protein 146##NM_001242849|RNF146|81847|ring finger protein 146##NM_001242852|RNF146|81847|ring finger protein 146##NM_001242845|RNF146|81847|ring finger protein 146##NM_001242846|RNF146|81847|ring finger protein 146##NM_001242850|RNF146|81847|ring finger protein 146##NM_030963|RNF146|81847|ring finger protein 146##AK027558|RNF146|81847|ring finger protein 146##AL136829|RNF146|81847|ring finger protein 146##AK025796|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001139510|ECHDC1|55862|enoyl CoA hydratase domain containing 1	0.032448	
chr15	45030689	45030829	reg1009336.p2	10.860	+	NM_080745 NM_182985	-2200	+	BC031266 TSC_hg19_v1_chr15_+_45021331	-9428	+	AK311550 TSC_hg19_v1_chr15_+_45021275 DQ232883	-9506	+	BC029537 NM_152448 DQ890983 DQ894158	218149	+	NM_003104 TSC_hg19_v1_chr15_+_45315395 AK312444 U07361 L29008 BC021085 AK295656 AK296574 AK309672 BC025295 AB529056 DQ892769 DQ896016	284631	+	TSC_hg19_v1_chr15_-_45406336 AF230496	375572	-	NM_080745|TRIM69|140691|tripartite motif containing 69##NM_182985|TRIM69|140691|tripartite motif containing 69##BC031266|TRIM69|140691|tripartite motif containing 69##DQ232883|TRIM69|140691|tripartite motif containing 69##BC029537|C15orf43|145645|chromosome 15 open reading frame 43##NM_152448|C15orf43|145645|chromosome 15 open reading frame 43##DQ890983|C15orf43|145645|chromosome 15 open reading frame 43##DQ894158|C15orf43|145645|chromosome 15 open reading frame 43##NM_003104|SORD|6652|sorbitol dehydrogenase##AK312444|SORD|6652|sorbitol dehydrogenase##U07361|SORD|6652|sorbitol dehydrogenase##L29008|SORD|6652|sorbitol dehydrogenase##BC021085|SORD|6652|sorbitol dehydrogenase##AK296574|SORD|6652|sorbitol dehydrogenase##AK309672|SORD|6652|sorbitol dehydrogenase##BC025295|SORD|6652|sorbitol dehydrogenase##DQ892769|SORD|6652|sorbitol dehydrogenase##DQ896016|SORD|6652|sorbitol dehydrogenase##AF230496|DUOX2|50506|dual oxidase 2	0.0	
chr18	23412111	23412254	reg1010596.p1	10.860	+	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	-480019	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	-480145	-	TSC_hg19_v1_chr18_-_22931121 AB385259	-481034	-	AB527567 EU832762 GQ129305 AB300354 AB300355 AB300356 AB300357 AF230662 AF244972 AF257500 AF343880 BC096221 BC096222 BC096223 BC096224 CR542088 CR542103 X79201 TSC_hg19_v1_chr18_-_23670574 AK304305 AK316302 AK316338 AK299082 AK307923 AK289510 NM_001007559 NM_005637 AK301504	258398	-	BC042820 NM_001025096 NM_001025097 NM_144662 BC025393 BC028371 BC028686 BC025389 BC047355 BC021713	301666	+	TSC_hg19_v1_chr18_+_23806444 NM_005640 AB234096	394235	+	AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##EU832762|SS18|6760|synovial sarcoma translocation, chromosome 18##GQ129305|SS18|6760|synovial sarcoma translocation, chromosome 18##AF244972|SS18|6760|synovial sarcoma translocation, chromosome 18##AF343880|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096221|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096222|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096223|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096224|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542088|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542103|SS18|6760|synovial sarcoma translocation, chromosome 18##X79201|SS18|6760|synovial sarcoma translocation, chromosome 18##AK304305|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316302|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316338|SS18|6760|synovial sarcoma translocation, chromosome 18##AK299082|SS18|6760|synovial sarcoma translocation, chromosome 18##AK307923|SS18|6760|synovial sarcoma translocation, chromosome 18##AK289510|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001007559|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_005637|SS18|6760|synovial sarcoma translocation, chromosome 18##AK301504|SS18|6760|synovial sarcoma translocation, chromosome 18##BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_005640|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##AB234096|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa	0.294549	CTCF.p2:-1:0.295
chr12	46696956	46697087	reg1008991.p2	10.859	+	NM_001077484 NM_030674	-33814	-	BX647547 TSC_hg19_v1_chr12_-_46662796 AK225639 AF271070 BX648495 AK225778 AK308129	-34203	-	TSC_hg19_v1_chr12_-_46662776 BC010620 BX648676	-34278	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	69268	-	TSC_hg19_v1_chr12_-_46766619 NM_018976	69582	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	522735	-	NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##BX647547|SLC38A1|81539|solute carrier family 38, member 1##AK225639|SLC38A1|81539|solute carrier family 38, member 1##AF271070|SLC38A1|81539|solute carrier family 38, member 1##BX648495|SLC38A1|81539|solute carrier family 38, member 1##AK225778|SLC38A1|81539|solute carrier family 38, member 1##AK308129|SLC38A1|81539|solute carrier family 38, member 1##BC010620|SLC38A1|81539|solute carrier family 38, member 1##BX648676|SLC38A1|81539|solute carrier family 38, member 1##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4	0.998925	CTCF.p2:12:0.999
chr13	46700804	46700939	reg1008781.p1	10.859	+	AB590176 BT006936 DQ890567 EU176478 TSC_hg19_v1_chr13_-_46679154 CU675521 AK290829 AB011969 M75106 BC007057 NM_001872 NM_016413	-21695	-	TSC_hg19_v1_chr13_+_46626953 AK095119 AK124928	-73900	+	BC019000 TSC_hg19_v1_chr13_-_46626864 AK056422 AY283618 NM_015070	-73988	-	TSC_hg19_v1_chr13_-_46742711 CR936795	41824	-	TSC_hg19_v1_chr13_-_46756291 J02923	55421	-	TSC_hg19_v1_chr13_-_46756297 BC007673 AB208984 AK312393	55437	-	BT006936|CPB2|1361|carboxypeptidase B2 (plasma)##DQ890567|CPB2|1361|carboxypeptidase B2 (plasma)##EU176478|CPB2|1361|carboxypeptidase B2 (plasma)##AK290829|CPB2|1361|carboxypeptidase B2 (plasma)##AB011969|CPB2|1361|carboxypeptidase B2 (plasma)##M75106|CPB2|1361|carboxypeptidase B2 (plasma)##BC007057|CPB2|1361|carboxypeptidase B2 (plasma)##NM_001872|CPB2|1361|carboxypeptidase B2 (plasma)##NM_016413|CPB2|1361|carboxypeptidase B2 (plasma)##AK095119|LOC100509894|100509894|uncharacterized LOC100509894##AK124928|LOC100509894|100509894|uncharacterized LOC100509894##BC019000|ZC3H13|23091|zinc finger CCCH-type containing 13##AK056422|ZC3H13|23091|zinc finger CCCH-type containing 13##AY283618|ZC3H13|23091|zinc finger CCCH-type containing 13##NM_015070|ZC3H13|23091|zinc finger CCCH-type containing 13##CR936795|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##BC007673|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AB208984|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AK312393|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)	0.044511	
chr17	7893597	7893736	reg1009766.p2	10.859	+	NM_001037144 NM_053051 AY160226 AY160227 TSC_hg19_v1_chr17_+_7835522 AK293076 AF331638 BC021134 AL833907	-58137	+	AB528455 DQ890860 DQ894015 BC025413 TSC_hg19_v1_chr17_-_7835265 BC032717 AK314038 NM_021210 NM_001166621	-58406	-	AF016411 BC096232 BC096233 BC096234 BC099634 NM_004732	-60914	-	DQ426876 NM_000180 M92432	12285	+	AK298095 NM_001039130 NM_001039131 NM_001141 AK292779 AK300554 BC063647 U78294 BC035217 BC033294 AB590334 DQ891345 EU176579 AF468051 AF468052 AF468053 AF468054	48746	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	66536	+	NM_001037144|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##NM_053051|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160226|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160227|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AK293076|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AF331638|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##BC021134|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AL833907|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##DQ890860|TRAPPC1|58485|trafficking protein particle complex 1##DQ894015|TRAPPC1|58485|trafficking protein particle complex 1##BC025413|TRAPPC1|58485|trafficking protein particle complex 1##BC032717|TRAPPC1|58485|trafficking protein particle complex 1##AK314038|TRAPPC1|58485|trafficking protein particle complex 1##NM_021210|TRAPPC1|58485|trafficking protein particle complex 1##NM_001166621|TRAPPC1|58485|trafficking protein particle complex 1##AF016411|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096232|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096233|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096234|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC099634|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_004732|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_000180|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##M92432|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##AK298095|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039130|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039131|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001141|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK292779|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK300554|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC063647|ALOX15B|247|arachidonate 15-lipoxygenase, type B##U78294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC035217|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC033294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##DQ891345|ALOX15B|247|arachidonate 15-lipoxygenase, type B##EU176579|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468051|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468052|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468053|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468054|ALOX15B|247|arachidonate 15-lipoxygenase, type B	0.958201	CTCF.p2:0:0.958
chr22	31343944	31344065	reg1009668.p1	10.859	+	AF323731 NM_030758 AK097581 AK294007 BC118914 AB051451 AB384622 AF288741	-253159	+	BC031973 TSC_hg19_v1_chr22_+_31063955	-280070	+	TSC_hg19_v1_chr22_-_31063837 BC030987 BC028724 AF461689 AK056074 NM_152511	-280169	-	AB020659 NM_014941	20182	-	AK056480 TSC_hg19_v1_chr22_+_31366813	22733	+	TSC_hg19_v1_chr22_+_31477303 NM_006932 NM_134269 NM_134270 AK128719 AF064238 AJ010306 AY061971 AY061972 Y13492 AK096953 AK293681 BC034237 AK300854	133278	+	AF323731|OSBP2|23762|oxysterol binding protein 2##NM_030758|OSBP2|23762|oxysterol binding protein 2##AK097581|OSBP2|23762|oxysterol binding protein 2##AK294007|OSBP2|23762|oxysterol binding protein 2##BC118914|OSBP2|23762|oxysterol binding protein 2##AB051451|OSBP2|23762|oxysterol binding protein 2##AF288741|OSBP2|23762|oxysterol binding protein 2##BC030987|DUSP18|150290|dual specificity phosphatase 18##BC028724|DUSP18|150290|dual specificity phosphatase 18##AF461689|DUSP18|150290|dual specificity phosphatase 18##AK056074|DUSP18|150290|dual specificity phosphatase 18##NM_152511|DUSP18|150290|dual specificity phosphatase 18##AB020659|MORC2|22880|MORC family CW-type zinc finger 2##NM_014941|MORC2|22880|MORC family CW-type zinc finger 2##NM_006932|SMTN|6525|smoothelin##NM_134269|SMTN|6525|smoothelin##NM_134270|SMTN|6525|smoothelin##AK128719|SMTN|6525|smoothelin##AF064238|SMTN|6525|smoothelin##AJ010306|SMTN|6525|smoothelin##AY061971|SMTN|6525|smoothelin##AY061972|SMTN|6525|smoothelin##Y13492|SMTN|6525|smoothelin##AK096953|SMTN|6525|smoothelin##AK293681|SMTN|6525|smoothelin##BC034237|SMTN|6525|smoothelin##AK300854|SMTN|6525|smoothelin	0.79651	CTCF.p2:-26:0.797
chr7	155608091	155608204	reg1008836.p1	10.859	+	AB464234 TSC_hg19_v1_chr7_-_155604951 L38518 NM_000193	-3257	-	AY927450 AY927452 AY927453 AY927454 AY927455 TSC_hg19_v1_chr7_-_155601833	-6349	-	TSC_hg19_v1_chr7_+_155437354 AK307515	-170779	+	AF063598 TSC_hg19_v1_chr7_-_156433234 BC050364 BC058889 BC031037 BC070228 AK056371 AF439977	825084	-	NM_030936 TSC_hg19_v1_chr7_+_156433487 AK314067 NM_001184996 AL136874 BC028120 AK307316	825318	+	NM_001184997 AF325690	827548	+	L38518|SHH|6469|sonic hedgehog##NM_000193|SHH|6469|sonic hedgehog##AY927450|SHH|6469|sonic hedgehog##AK307515|RBM33|155435|RNA binding motif protein 33##AF063598|C7orf13|129790|chromosome 7 open reading frame 13##BC050364|C7orf13|129790|chromosome 7 open reading frame 13##BC031037|C7orf13|129790|chromosome 7 open reading frame 13##BC070228|C7orf13|129790|chromosome 7 open reading frame 13##AK056371|C7orf13|129790|chromosome 7 open reading frame 13##AF439977|C7orf13|129790|chromosome 7 open reading frame 13##NM_030936|RNF32|140545|ring finger protein 32##AK314067|RNF32|140545|ring finger protein 32##NM_001184996|RNF32|140545|ring finger protein 32##AL136874|RNF32|140545|ring finger protein 32##BC028120|RNF32|140545|ring finger protein 32##AK307316|RNF32|140545|ring finger protein 32##NM_001184997|RNF32|140545|ring finger protein 32##AF325690|RNF32|140545|ring finger protein 32	0.023525	
chr10	29528959	29529085	reg1009414.p1	10.858	+	TSC_hg19_v1_chr10_+_28966451 NM_012342 AK290639 BC019252 AK223065 U23070	-562575	+	TSC_hg19_v1_chr10_+_28878692 BC010356	-650316	+	AB590052 AK297460 TSC_hg19_v1_chr10_+_28822585	-706476	+	NM_032517 BC021730 AY358694	48994	+	TSC_hg19_v1_chr10_+_29698475 BC066966 BC050354	169447	+	BC107795 AK056080 TSC_hg19_v1_chr10_+_29698485	169463	+	NM_012342|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK290639|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC019252|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK223065|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##U23070|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC010356|WAC|51322|WW domain containing adaptor with coiled-coil##AK297460|WAC|51322|WW domain containing adaptor with coiled-coil##NM_032517|LYZL1|84569|lysozyme-like 1##BC021730|LYZL1|84569|lysozyme-like 1##AY358694|LYZL1|84569|lysozyme-like 1##BC066966|LOC387647|387647|patched domain containing 3 pseudogene##BC050354|LOC387647|387647|patched domain containing 3 pseudogene##BC107795|LOC387647|387647|patched domain containing 3 pseudogene##AK056080|LOC387647|387647|patched domain containing 3 pseudogene	0.063187	
chr12	30960488	30960615	reg1010764.p1	10.858	+	AY074490 AY074491 NM_001002259 NM_001206856 NM_023925 NM_032156	-53104	-	TSC_hg19_v1_chr12_-_30848807 NM_006390	-111685	-	U77494 TSC_hg19_v1_chr12_-_30848794	-111781	-	TSC_hg19_v1_chr12_+_31079362 BC084571	118810	+	TSC_hg19_v1_chr12_+_31079681 AK293947	119109	+	AK300920 NM_001080509 TSC_hg19_v1_chr12_+_31079866 BC146917 BC146922	119313	+	AY074490|CAPRIN2|65981|caprin family member 2##AY074491|CAPRIN2|65981|caprin family member 2##NM_001002259|CAPRIN2|65981|caprin family member 2##NM_001206856|CAPRIN2|65981|caprin family member 2##NM_023925|CAPRIN2|65981|caprin family member 2##NM_032156|CAPRIN2|65981|caprin family member 2##NM_006390|IPO8|10526|importin 8##U77494|IPO8|10526|importin 8##AK293947|TSPAN11|441631|tetraspanin 11##AK300920|TSPAN11|441631|tetraspanin 11##NM_001080509|TSPAN11|441631|tetraspanin 11##BC146917|TSPAN11|441631|tetraspanin 11##BC146922|TSPAN11|441631|tetraspanin 11	0.93285	CTCF.p2:19:0.933
chr6	155498630	155498768	reg1009025.p1	10.858	+	NM_012454	-87277	+	TSC_hg19_v1_chr6_+_155054812 AB029039	-443874	+	AK295651 AK303001 AK307815 TSC_hg19_v1_chr6_+_155054549 BC032728	-444145	+	NM_001010927 AK299723 BC066979 AF120324 BC022469	39429	+	BC020838 NM_001001346	86447	+	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	136886	-	NM_012454|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AB029039|SCAF8|22828|SR-related CTD-associated factor 8##AK295651|SCAF8|22828|SR-related CTD-associated factor 8##AK303001|SCAF8|22828|SR-related CTD-associated factor 8##AK307815|SCAF8|22828|SR-related CTD-associated factor 8##BC032728|SCAF8|22828|SR-related CTD-associated factor 8##NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC020838|CLDN20|49861|claudin 20##NM_001001346|CLDN20|49861|claudin 20##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial	0.961377	CTCF.p2:-8:0.961
chr1	160747393	160747524	reg1011663.p1	10.857	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-38394	+	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	-65872	-	AK314244 NM_003037 BC012602	-130395	-	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	18540	+	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	85120	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	107500	-	AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)	0.031432	
chr9	135286596	135286725	reg1010234.p1	10.857	+	AK128819 NM_207417 BC118593 BC124555	-1048	+	TSC_hg19_v1_chr9_-_135282210 BC050734 X83973 BC143821 BC127669 BC127670 BC143048 BC143049 BC062692 BC104639 AK225119 AK302902 NM_001205296 NM_007344	-4459	-	TSC_hg19_v1_chr9_-_135230374 BX538166 NM_015046	-56253	-	TSC_hg19_v1_chr9_+_135457992 AK054797 NM_020064 BC136956 BC136969 BC144433 AF325688 AB463426 AF321618	171419	+	TSC_hg19_v1_chr9_-_135545374 AK225121 AK027002 AK225350 AK304715 BC012726	258720	-	TSC_hg19_v1_chr9_+_135545447 BC060821	258758	+	AK128819|C9orf171|389799|chromosome 9 open reading frame 171##NM_207417|C9orf171|389799|chromosome 9 open reading frame 171##BC118593|C9orf171|389799|chromosome 9 open reading frame 171##BC124555|C9orf171|389799|chromosome 9 open reading frame 171##BC050734|TTF1|7270|transcription termination factor, RNA polymerase I##BC143821|TTF1|7270|transcription termination factor, RNA polymerase I##BC127669|TTF1|7270|transcription termination factor, RNA polymerase I##BC127670|TTF1|7270|transcription termination factor, RNA polymerase I##BC143048|TTF1|7270|transcription termination factor, RNA polymerase I##BC143049|TTF1|7270|transcription termination factor, RNA polymerase I##BC062692|TTF1|7270|transcription termination factor, RNA polymerase I##BC104639|TTF1|7270|transcription termination factor, RNA polymerase I##AK225119|TTF1|7270|transcription termination factor, RNA polymerase I##AK302902|TTF1|7270|transcription termination factor, RNA polymerase I##NM_001205296|TTF1|7270|transcription termination factor, RNA polymerase I##NM_007344|TTF1|7270|transcription termination factor, RNA polymerase I##BX538166|SETX|23064|senataxin##NM_015046|SETX|23064|senataxin##AK054797|BARHL1|56751|BarH-like homeobox 1##NM_020064|BARHL1|56751|BarH-like homeobox 1##BC136956|BARHL1|56751|BarH-like homeobox 1##BC136969|BARHL1|56751|BarH-like homeobox 1##BC144433|BARHL1|56751|BarH-like homeobox 1##AF325688|BARHL1|56751|BarH-like homeobox 1##AF321618|BARHL1|56751|BarH-like homeobox 1##AK225121|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK027002|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK225350|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK304715|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC012726|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC060821|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa	0.531211	CTCF.p2:-25:0.531
chr1	34098743	34098861	reg1010001.p1	10.856	+	NM_145238 AK131405 TSC_hg19_v1_chr1_+_33938251 AK290195 BC008827 BC011404	-160551	+	TSC_hg19_v1_chr1_-_33896604 AJ242730	-202194	-	AB527842 AJ419231 BC130630 BC144121 NM_198040	-257635	-	AK097707 NM_145205	227273	+	TSC_hg19_v1_chr1_-_34630856 AB212622	532063	-	AY210418 NM_052896	532640	-	NM_145238|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK131405|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK290195|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC008827|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC011404|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AJ242730|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AJ419231|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC130630|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC144121|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##NM_198040|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AK097707|HMGB4|127540|high mobility group box 4##NM_145205|HMGB4|127540|high mobility group box 4##AB212622|CSMD2|114784|CUB and Sushi multiple domains 2##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2	0.992601	CTCF.p2:-6:0.993
chr2	196943119	196943263	reg1011197.p1	10.856	+	AB463018 AF327442 AK094515 NM_018897 AB023161	-9696	-	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	-421283	+	BC029413 NM_001127257 CR749813	-421616	+	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	93088	-	TSC_hg19_v1_chr2_-_197036310 NM_004226	93127	-	BC117194 BC117198 AB037722 NM_020760	514101	-	AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##NM_004226|STK17B|9262|serine/threonine kinase 17b##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	0.775777	CTCF.p2:-17:0.776
chr10	13482590	13482721	reg1010344.p1	10.855	+	TSC_hg19_v1_chr10_-_13390214 U34044 BC063816 GU954545 GU954546 GU954547 GU954548 GU954549 NM_001195602 NM_001195604 NM_012247	-92388	-	TSC_hg19_v1_chr10_-_13390036 AK301568 AK309829	-92616	-	TSC_hg19_v1_chr10_-_13342064 AF023462 BC029512 AF112977 BC021011 NM_006214	-140559	-	BC031618 AK097602 NM_001100912 NM_152751	62304	-	NM_003675 TSC_hg19_v1_chr10_+_13628948	146288	+	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	146332	+	U34044|SEPHS1|22929|selenophosphate synthetase 1##BC063816|SEPHS1|22929|selenophosphate synthetase 1##GU954545|SEPHS1|22929|selenophosphate synthetase 1##GU954546|SEPHS1|22929|selenophosphate synthetase 1##GU954547|SEPHS1|22929|selenophosphate synthetase 1##GU954548|SEPHS1|22929|selenophosphate synthetase 1##GU954549|SEPHS1|22929|selenophosphate synthetase 1##NM_001195602|SEPHS1|22929|selenophosphate synthetase 1##NM_001195604|SEPHS1|22929|selenophosphate synthetase 1##NM_012247|SEPHS1|22929|selenophosphate synthetase 1##AK301568|SEPHS1|22929|selenophosphate synthetase 1##AK309829|SEPHS1|22929|selenophosphate synthetase 1##AF023462|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC029512|PHYH|5264|phytanoyl-CoA 2-hydroxylase##AF112977|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC021011|PHYH|5264|phytanoyl-CoA 2-hydroxylase##NM_006214|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC031618|BEND7|222389|BEN domain containing 7##AK097602|BEND7|222389|BEN domain containing 7##NM_001100912|BEND7|222389|BEN domain containing 7##NM_152751|BEND7|222389|BEN domain containing 7##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)	0.766881	CTCF.p2:3:0.767
chr15	85053550	85053661	reg1011240.p1	10.855	+	NM_001243531	-212364	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-730778	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-937377	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	90676	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	143867	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	143901	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	0.823666	CTCF.p2:-3:0.800
chr2	1554595	1554719	reg1010274.p1	10.855	+	NM_175721 NM_175722 AF439430 CU687644	-136478	+	BC063107 NM_000547 NM_001206744 NM_001206745 NM_175719 BC095448 M17755 J02969 J02970 X17358 Y00406	-137402	+	TSC_hg19_v1_chr2_+_946534 BC035783 NM_018968 AJ003029 BC125251	-608078	+	BC098579 TSC_hg19_v1_chr2_-_1748229	193565	-	TSC_hg19_v1_chr2_-_1748282 AF200348 D86983 EF090903	193604	-	TSC_hg19_v1_chr2_-_1748288 NM_012293	193636	-	NM_175721|TPO|7173|thyroid peroxidase##NM_175722|TPO|7173|thyroid peroxidase##AF439430|TPO|7173|thyroid peroxidase##BC063107|TPO|7173|thyroid peroxidase##NM_000547|TPO|7173|thyroid peroxidase##NM_001206744|TPO|7173|thyroid peroxidase##NM_001206745|TPO|7173|thyroid peroxidase##NM_175719|TPO|7173|thyroid peroxidase##BC095448|TPO|7173|thyroid peroxidase##M17755|TPO|7173|thyroid peroxidase##J02969|TPO|7173|thyroid peroxidase##J02970|TPO|7173|thyroid peroxidase##X17358|TPO|7173|thyroid peroxidase##Y00406|TPO|7173|thyroid peroxidase##BC035783|SNTG2|54221|syntrophin, gamma 2##NM_018968|SNTG2|54221|syntrophin, gamma 2##AJ003029|SNTG2|54221|syntrophin, gamma 2##BC125251|SNTG2|54221|syntrophin, gamma 2##BC098579|PXDN|7837|peroxidasin homolog (Drosophila)##AF200348|PXDN|7837|peroxidasin homolog (Drosophila)##D86983|PXDN|7837|peroxidasin homolog (Drosophila)##EF090903|PXDN|7837|peroxidasin homolog (Drosophila)##NM_012293|PXDN|7837|peroxidasin homolog (Drosophila)	0.999708	CTCF.p2:3:1.000
chr7	43479506	43479655	reg1009814.p1	10.855	+	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	-327354	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-507611	+	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	-507779	-	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	143114	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	289514	-	TSC_hg19_v1_chr7_+_43798278 NM_000712 NM_001253823 BC005902 BC008456	318687	+	AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44##NM_000712|BLVRA|644|biliverdin reductase A##NM_001253823|BLVRA|644|biliverdin reductase A##BC005902|BLVRA|644|biliverdin reductase A##BC008456|BLVRA|644|biliverdin reductase A	0.999692	CTCF.p2:3:1.000
chr8	11603948	11604078	reg1009299.p1	10.855	+	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	-42293	+	S76617 NM_001715 BC018703 BC004473 BC038555	-252420	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-279784	-	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	23255	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	56171	+	TSC_hg19_v1_chr8_+_11660249 AK296043 AK315993 AK311246 X69141 AK301617	56225	+	NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##AK296043|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##AK315993|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##AK311246|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##X69141|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##AK301617|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.691189	CTCF.p2:12:0.691
chr12	107313820	107313947	reg1011239.p1	10.854	+	TSC_hg19_v1_chr12_+_107168357 NM_018157 BC132689 BC144056 BC034220 AK001482 AY221116	-145421	+	BC028582 NM_032491 AF332192 AK315698 BC030644 CU688514 CU688962 DQ890831 DQ893986	-235350	+	NM_001206691 AB095365 AK302837 AB044245	-318952	+	TSC_hg19_v1_chr12_+_107349591 NM_152261	35714	+	AK024021 TSC_hg19_v1_chr12_+_107349684 AK001731 BC020522 AK022770	35825	+	TSC_hg19_v1_chr12_-_107380925 BC036066 BC068468 AK222558 AY008301 BC050361 BC025984 AK024124 NM_001033050 NM_025198	67015	-	NM_018157|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC132689|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC144056|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC034220|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AK001482|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AY221116|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC028582|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_032491|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AF332192|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK315698|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##BC030644|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ890831|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ893986|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_001206691|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095365|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK302837|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB044245|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_152261|C12orf23|90488|chromosome 12 open reading frame 23##AK024021|C12orf23|90488|chromosome 12 open reading frame 23##AK001731|C12orf23|90488|chromosome 12 open reading frame 23##BC020522|C12orf23|90488|chromosome 12 open reading frame 23##AK022770|C12orf23|90488|chromosome 12 open reading frame 23##BC036066|MTERFD3|80298|MTERF domain containing 3##BC068468|MTERFD3|80298|MTERF domain containing 3##AK222558|MTERFD3|80298|MTERF domain containing 3##AY008301|MTERFD3|80298|MTERF domain containing 3##BC050361|MTERFD3|80298|MTERF domain containing 3##BC025984|MTERFD3|80298|MTERF domain containing 3##AK024124|MTERFD3|80298|MTERF domain containing 3##NM_001033050|MTERFD3|80298|MTERF domain containing 3##NM_025198|MTERFD3|80298|MTERF domain containing 3	0.987219	CTCF.p2:5:0.987
chr1	87597546	87597665	reg1009403.p1	10.854	+	TSC_hg19_v1_chr1_+_87595568 BC030523	-2056	+	AB007917 TSC_hg19_v1_chr1_+_87380462	-217148	+	TSC_hg19_v1_chr1_+_87380374 BC025384 BC025990 NM_001134492 NM_012262 AK023260 AB024568 BC108735	-217252	+	NM_006769 U24576 TSC_hg19_v1_chr1_+_87794164	196552	+	AK292578 TSC_hg19_v1_chr1_+_87794564	196954	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	197076	+	BC030523|LOC339524|339524|uncharacterized LOC339524##AB007917|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025384|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025990|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_001134492|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_012262|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AK023260|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AB024568|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC108735|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_006769|LMO4|8543|LIM domain only 4##U24576|LMO4|8543|LIM domain only 4##AK292578|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4	0.992469	CTCF.p2:-8:0.992
chr20	21700385	21700506	reg1011271.p1	10.854	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	-13912	+	TSC_hg19_v1_chr20_+_21686296 NM_006192	-14151	+	NM_002509	-205782	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	864471	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	864630	-	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	865657	-	BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1##NM_006192|PAX1|5075|paired box 1##NM_002509|NKX2-2|4821|NK2 homeobox 2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2	0.993743	CTCF.p2:-3:0.994
chr4	1748063	1748184	reg1009606.p1	10.854	+	TSC_hg19_v1_chr4_+_1723248 AK302463 AK225631 BC106071 AF093543 AF479620 AJ243997 BC111771	-24855	+	TSC_hg19_v1_chr4_+_1723215 NM_006342	-24906	+	TSC_hg19_v1_chr4_-_1722981 BC126370 BC009331 BC018921 NM_001127266 NM_138385	-25092	-	TSC_hg19_v1_chr4_+_1795019 AB209441 NM_000142 NM_001163213 NM_022965	46903	+	DQ893606 AK293572 TSC_hg19_v1_chr4_-_1857827 BC014500 BC021208 AF061025 NM_012318	109708	-	AK289697 TSC_hg19_v1_chr4_+_1873132 NM_001042424	124961	+	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3##NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC126370|TMEM129|92305|transmembrane protein 129##BC009331|TMEM129|92305|transmembrane protein 129##BC018921|TMEM129|92305|transmembrane protein 129##NM_001127266|TMEM129|92305|transmembrane protein 129##NM_138385|TMEM129|92305|transmembrane protein 129##AB209441|FGFR3|2261|fibroblast growth factor receptor 3##NM_000142|FGFR3|2261|fibroblast growth factor receptor 3##NM_001163213|FGFR3|2261|fibroblast growth factor receptor 3##NM_022965|FGFR3|2261|fibroblast growth factor receptor 3##DQ893606|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK293572|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC014500|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC021208|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AF061025|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##NM_012318|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK289697|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_001042424|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	0.375835	CTCF.p2:8:0.317
chr1	21697177	21697285	reg1009795.p1	10.852	+	X98272 TSC_hg19_v1_chr1_-_21671998 NM_001113348	-25251	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	-80297	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	-80523	-	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	69451	+	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	138628	+	TSC_hg19_v1_chr1_+_21835918 AK295608 AK312667 AK298085 BC021289 BC066116 BC090861 AB011406 AH007388 X95994 AK293184 BC110909	138701	+	X98272|ECE1|1889|endothelin converting enzyme 1##NM_001113348|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK295608|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK312667|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK298085|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC021289|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC066116|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC090861|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB011406|ALPL|249|alkaline phosphatase, liver/bone/kidney##X95994|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK293184|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC110909|ALPL|249|alkaline phosphatase, liver/bone/kidney	0.953083	CTCF.p2:-7:0.953
chr2	160796584	160796729	reg1011947.p1	10.852	+	NM_001198759 NM_001198760 NM_002349 TSC_hg19_v1_chr2_-_160761270	-35366	-	AF064827 AY184222 AY314006 TSC_hg19_v1_chr2_-_160761248 AF011333 AK310678 BC057232	-35430	-	TSC_hg19_v1_chr2_-_160654754 AK304422 AY314007 NM_001198763 NM_001198764 NM_014880	-141900	-	BC140823 BC144631 TSC_hg19_v1_chr2_-_160919021	122323	-	U17033 U17034 NM_001007267 NM_001195641 NM_007366 TSC_hg19_v1_chr2_-_160919148	122479	-	AB463075 AM393800 M35198 NM_000888 BC121178 BC143656	259931	-	NM_001198759|LY75-CD302|100526664|LY75-CD302 readthrough##NM_001198760|LY75-CD302|100526664|LY75-CD302 readthrough##NM_002349|LY75|4065|lymphocyte antigen 75##AF064827|LY75|4065|lymphocyte antigen 75##AY184222|LY75-CD302|100526664|LY75-CD302 readthrough##AY314006|LY75-CD302|100526664|LY75-CD302 readthrough##AF011333|LY75|4065|lymphocyte antigen 75##AK310678|LY75|4065|lymphocyte antigen 75##BC057232|LY75|4065|lymphocyte antigen 75##AK304422|CD302|9936|CD302 molecule##AY314007|CD302|9936|CD302 molecule##NM_001198763|CD302|9936|CD302 molecule##NM_001198764|CD302|9936|CD302 molecule##NM_014880|CD302|9936|CD302 molecule##BC140823|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC144631|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##U17033|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##U17034|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001007267|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001195641|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_007366|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##AM393800|ITGB6|3694|integrin, beta 6##M35198|ITGB6|3694|integrin, beta 6##NM_000888|ITGB6|3694|integrin, beta 6##BC121178|ITGB6|3694|integrin, beta 6##BC143656|ITGB6|3694|integrin, beta 6	0.490463	CTCF.p2:3:0.490
chr1	32866554	32866677	reg1011336.p1	10.851	+	CR457252 TSC_hg19_v1_chr1_-_32860030 BC010573 CR749228 BX641056 AK300231 BC026322 AK297604 AK300306 AK001138 AK225717 AK293454 BC028381 AK021440 AK297352 AK225026 AK304477 AK316172 NM_001143888 NM_001143889 NM_001143890 NM_018045	-6578	-	NM_001167676	-38772	-	BC035354 NM_052841	-38786	+	TSC_hg19_v1_chr1_+_32930659 AK092326 AX747483 NM_001145720	64037	+	NM_001040441	138156	+	TSC_hg19_v1_chr1_+_33005058 AK074546 AY157873 BC015239	138429	+	CR457252|BSDC1|55108|BSD domain containing 1##BC010573|BSDC1|55108|BSD domain containing 1##CR749228|BSDC1|55108|BSD domain containing 1##BX641056|BSDC1|55108|BSD domain containing 1##AK300231|BSDC1|55108|BSD domain containing 1##BC026322|BSDC1|55108|BSD domain containing 1##AK297604|BSDC1|55108|BSD domain containing 1##AK300306|BSDC1|55108|BSD domain containing 1##AK001138|BSDC1|55108|BSD domain containing 1##AK225717|BSDC1|55108|BSD domain containing 1##AK293454|BSDC1|55108|BSD domain containing 1##BC028381|BSDC1|55108|BSD domain containing 1##AK021440|BSDC1|55108|BSD domain containing 1##AK297352|BSDC1|55108|BSD domain containing 1##AK225026|BSDC1|55108|BSD domain containing 1##AK304477|BSDC1|55108|BSD domain containing 1##AK316172|BSDC1|55108|BSD domain containing 1##NM_001143888|BSDC1|55108|BSD domain containing 1##NM_001143889|BSDC1|55108|BSD domain containing 1##NM_001143890|BSDC1|55108|BSD domain containing 1##NM_018045|BSDC1|55108|BSD domain containing 1##NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##NM_001145720|ZBTB8B|728116|zinc finger and BTB domain containing 8B##NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A##AK074546|ZBTB8A|653121|zinc finger and BTB domain containing 8A##AY157873|ZBTB8A|653121|zinc finger and BTB domain containing 8A##BC015239|ZBTB8A|653121|zinc finger and BTB domain containing 8A	0.990541	CTCF.p2:-5:0.991
chr2	218853360	218853494	reg1011933.p1	10.851	+	AK001785 TSC_hg19_v1_chr2_-_218843551	-9881	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	-44646	-	BC029516 NM_003284	-1128646	-	TSC_hg19_v1_chr2_-_218867719 AK309785	14296	-	NM_198483	80310	+	U11872 NM_001168298	136577	+	AK001785|TNS1|7145|tensin 1##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AK309785|TNS1|7145|tensin 1##NM_198483|RUFY4|285180|RUN and FYVE domain containing 4##U11872|CXCR2|3579|chemokine (C-X-C motif) receptor 2##NM_001168298|CXCR2|3579|chemokine (C-X-C motif) receptor 2	0.0	
chr3	42232776	42232882	reg1007257.p1	10.851	+	TSC_hg19_v1_chr3_+_42201684 BX647199 NM_014965 BC015922 AK000754 AM392573 AM393596 CU677507 EU446989	-31074	+	AL713787 TSC_hg19_v1_chr3_+_42190865	-41982	+	TSC_hg19_v1_chr3_+_42190749 AK294221	-42081	+	BC008283 NM_001174138	72609	-	BC111026 NM_000729	74832	-	AF326749 BC016747 NM_144634	219214	-	BX647199|TRAK1|22906|trafficking protein, kinesin binding 1##NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1##BC015922|TRAK1|22906|trafficking protein, kinesin binding 1##AK000754|TRAK1|22906|trafficking protein, kinesin binding 1##AM392573|TRAK1|22906|trafficking protein, kinesin binding 1##AM393596|TRAK1|22906|trafficking protein, kinesin binding 1##EU446989|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##BC008283|CCK|885|cholecystokinin##NM_001174138|CCK|885|cholecystokinin##BC111026|CCK|885|cholecystokinin##NM_000729|CCK|885|cholecystokinin##AF326749|LYZL4|131375|lysozyme-like 4##BC016747|LYZL4|131375|lysozyme-like 4##NM_144634|LYZL4|131375|lysozyme-like 4	0.998035	CTCF.p2:-3:0.998
chr5	102560419	102560553	reg1011430.p1	10.851	+	BC024591 NM_015216 AB463068	-95212	+	TSC_hg19_v1_chr5_+_102456089 AK294787	-104428	+	AK310544 AB007893 TSC_hg19_v1_chr5_+_102456004	-104505	+	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	33971	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	337995	-	AK308672 NM_001962 U26403	4446104	-	BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK294787|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AB007893|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5	0.470379	CTCF.p2:-1:0.470
chr11	3846073	3846207	reg1010776.p1	10.850	+	NM_014489 AF159615	-16366	+	AL096753 NM_001145438 TSC_hg19_v1_chr11_+_3819145 AK307359 AK308525 AK292181 BC009930 AK301991	-27055	+	TSC_hg19_v1_chr11_-_3819023 NM_005387 NM_016320 NM_139131 NM_139132	-27139	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	16015	-	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	16059	-	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	30789	+	NM_014489|PGAP2|27315|post-GPI attachment to proteins 2##AF159615|PGAP2|27315|post-GPI attachment to proteins 2##AL096753|PGAP2|27315|post-GPI attachment to proteins 2##NM_001145438|PGAP2|27315|post-GPI attachment to proteins 2##AK307359|PGAP2|27315|post-GPI attachment to proteins 2##AK292181|PGAP2|27315|post-GPI attachment to proteins 2##BC009930|PGAP2|27315|post-GPI attachment to proteins 2##AK301991|PGAP2|27315|post-GPI attachment to proteins 2##NM_005387|NUP98|4928|nucleoporin 98kDa##NM_016320|NUP98|4928|nucleoporin 98kDa##NM_139131|NUP98|4928|nucleoporin 98kDa##NM_139132|NUP98|4928|nucleoporin 98kDa##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1	0.060952	
chr9	71808198	71808303	reg1008716.p1	10.850	+	TSC_hg19_v1_chr9_+_71789197 AF083892 BC028426 AF489824 L27476 AB385223 AM392689 AM392712 AM392803 AM392967	-19031	+	NM_001170630 NM_004817 NM_201629 BC027592 TSC_hg19_v1_chr9_+_71789110	-19210	+	AF083893 TSC_hg19_v1_chr9_+_71736397	-71839	+	NM_001170415 AK302483 AK295034 NM_001170416	11751	+	NM_001127608	131237	+	AK126127 NM_004816	135990	+	AF083892|TJP2|9414|tight junction protein 2 (zona occludens 2)##BC028426|TJP2|9414|tight junction protein 2 (zona occludens 2)##AF489824|TJP2|9414|tight junction protein 2 (zona occludens 2)##L27476|TJP2|9414|tight junction protein 2 (zona occludens 2)##AM392689|TJP2|9414|tight junction protein 2 (zona occludens 2)##AM392712|TJP2|9414|tight junction protein 2 (zona occludens 2)##AM392803|TJP2|9414|tight junction protein 2 (zona occludens 2)##AM392967|TJP2|9414|tight junction protein 2 (zona occludens 2)##NM_001170630|TJP2|9414|tight junction protein 2 (zona occludens 2)##NM_004817|TJP2|9414|tight junction protein 2 (zona occludens 2)##NM_201629|TJP2|9414|tight junction protein 2 (zona occludens 2)##BC027592|TJP2|9414|tight junction protein 2 (zona occludens 2)##AF083893|TJP2|9414|tight junction protein 2 (zona occludens 2)##NM_001170415|TJP2|9414|tight junction protein 2 (zona occludens 2)##AK302483|TJP2|9414|tight junction protein 2 (zona occludens 2)##AK295034|TJP2|9414|tight junction protein 2 (zona occludens 2)##NM_001170416|TJP2|9414|tight junction protein 2 (zona occludens 2)##NM_001127608|FAM189A2|9413|family with sequence similarity 189, member A2##AK126127|FAM189A2|9413|family with sequence similarity 189, member A2##NM_004816|FAM189A2|9413|family with sequence similarity 189, member A2	0.93264	CTCF.p2:-4:0.933
chr3	142712923	142713068	reg1010709.p1	10.849	+	TSC_hg19_v1_chr3_+_142682794 BC062727	-30165	+	AK123932 BC118666 BC122527 NM_198504 AY424287	-30780	-	CR536570 TSC_hg19_v1_chr3_-_142607926 AB528798 AF098269 BC006265 AK315121 AY035400 AK223633 AY358557 AK075478 NM_013363	-105099	-	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	7435	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	125656	+	BC067737 TSC_hg19_v1_chr3_+_142895211	182176	+	BC062727|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK123932|PAQR9|344838|progestin and adipoQ receptor family member IX##BC118666|PAQR9|344838|progestin and adipoQ receptor family member IX##BC122527|PAQR9|344838|progestin and adipoQ receptor family member IX##NM_198504|PAQR9|344838|progestin and adipoQ receptor family member IX##AY424287|PAQR9|344838|progestin and adipoQ receptor family member IX##CR536570|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AF098269|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##BC006265|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK315121|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AY035400|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK223633|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AY358557|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK075478|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##NM_013363|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2	0.850007	CTCF.p2:23:0.835
chr3	4763867	4764013	reg1008659.p1	10.849	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-228744	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-228812	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-228909	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	257176	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	257241	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	257414	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.762473	CTCF.p2:-5:0.762
chr3	67022385	67022511	reg1009791.p1	10.849	+	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	-470984	-	AF381545 BC140907 NM_015541 AY730707	-471596	-	TSC_hg19_v1_chr3_+_66444897 AB075504	-577489	+	NM_032505 AK096640 AK300397	26280	+	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	682614	-	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	682702	+	AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit	0.106437	
chr4	175143559	175143677	reg1011945.p1	10.849	+	EF529495 EF529496 EF529497 EF529498 EF529499 EF529500 EF529501 EF529502 EF529503 EF529504 EF529505 EF529506 EF529507 EF529508 EF529509 EU000853 EU000854 EU000855 EU000856 TSC_hg19_v1_chr4_+_174451609 AB075501 AK300846 AK054605	-692008	+	TSC_hg19_v1_chr4_-_174451381 NM_021973 AK122739 FJ226608	-692249	-	BC101406 BC101974 BC109383 TSC_hg19_v1_chr4_-_174450570	-693068	-	AF174596 AF233224 TSC_hg19_v1_chr4_-_175204794 AF115514 AY358721 BC014679 AF201932 AK026319 BC040456 AK314483	61116	-	NM_001040157 TSC_hg19_v1_chr4_+_175204877	61242	+	TSC_hg19_v1_chr4_+_175205073 NM_001145314 BC038667 AB051499 AK094961 AK292484	61495	+	EF529495|NBLA00301|79804|Nbla00301##EF529496|NBLA00301|79804|Nbla00301##EF529497|NBLA00301|79804|Nbla00301##EF529498|NBLA00301|79804|Nbla00301##EF529499|NBLA00301|79804|Nbla00301##EF529500|NBLA00301|79804|Nbla00301##EF529501|NBLA00301|79804|Nbla00301##EF529502|NBLA00301|79804|Nbla00301##EF529503|NBLA00301|79804|Nbla00301##EF529504|NBLA00301|79804|Nbla00301##EF529505|NBLA00301|79804|Nbla00301##EF529506|NBLA00301|79804|Nbla00301##EF529507|NBLA00301|79804|Nbla00301##EF529508|NBLA00301|79804|Nbla00301##EF529509|NBLA00301|79804|Nbla00301##EU000853|NBLA00301|79804|Nbla00301##EU000854|NBLA00301|79804|Nbla00301##EU000855|NBLA00301|79804|Nbla00301##EU000856|NBLA00301|79804|Nbla00301##AB075501|NBLA00301|79804|Nbla00301##AK054605|NBLA00301|79804|Nbla00301##NM_021973|HAND2|9464|heart and neural crest derivatives expressed 2##AK122739|HAND2|9464|heart and neural crest derivatives expressed 2##FJ226608|HAND2|9464|heart and neural crest derivatives expressed 2##BC101406|HAND2|9464|heart and neural crest derivatives expressed 2##BC101974|HAND2|9464|heart and neural crest derivatives expressed 2##BC109383|HAND2|9464|heart and neural crest derivatives expressed 2##AF174596|FBXO8|26269|F-box protein 8##AF233224|FBXO8|26269|F-box protein 8##AF115514|FBXO8|26269|F-box protein 8##AY358721|FBXO8|26269|F-box protein 8##BC014679|FBXO8|26269|F-box protein 8##AF201932|FBXO8|26269|F-box protein 8##AK026319|FBXO8|26269|F-box protein 8##BC040456|FBXO8|26269|F-box protein 8##AK314483|FBXO8|26269|F-box protein 8##NM_001040157|CEP44|80817|centrosomal protein 44kDa##NM_001145314|CEP44|80817|centrosomal protein 44kDa##BC038667|CEP44|80817|centrosomal protein 44kDa##AB051499|CEP44|80817|centrosomal protein 44kDa##AK094961|CEP44|80817|centrosomal protein 44kDa##AK292484|CEP44|80817|centrosomal protein 44kDa	0.955395	CTCF.p2:-8:0.955
chr9	139941108	139941212	reg1010836.p1	10.849	+	TSC_hg19_v1_chr9_-_139940630 AF327349 AK074793 AF285836 NM_015392	-521	-	TSC_hg19_v1_chr9_-_139940559 BC004217	-598	-	TSC_hg19_v1_chr9_-_139940543 AK225091 AF272357	-651	-	AF144748 EF495152 CU690182 DQ892410 DQ895623 U91510 BC035738 NM_001246 NM_203468	7315	-	TSC_hg19_v1_chr9_-_139965024 BC048267 NM_178448 DQ150361	23873	-	TSC_hg19_v1_chr9_+_139971968 NM_207309	30793	+	AF327349|NPDC1|56654|neural proliferation, differentiation and control, 1##AK074793|NPDC1|56654|neural proliferation, differentiation and control, 1##AF285836|NPDC1|56654|neural proliferation, differentiation and control, 1##NM_015392|NPDC1|56654|neural proliferation, differentiation and control, 1##BC004217|NPDC1|56654|neural proliferation, differentiation and control, 1##AK225091|NPDC1|56654|neural proliferation, differentiation and control, 1##AF272357|NPDC1|56654|neural proliferation, differentiation and control, 1##AF144748|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##EF495152|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##DQ892410|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##DQ895623|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##U91510|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##BC035738|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##NM_001246|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##NM_203468|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##BC048267|C9orf140|89958|chromosome 9 open reading frame 140##NM_178448|C9orf140|89958|chromosome 9 open reading frame 140##DQ150361|C9orf140|89958|chromosome 9 open reading frame 140##NM_207309|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	0.99375	CTCF.p2:-2:0.994
chr8	22280214	22280301	reg1008366.p1	10.847	+	TSC_hg19_v1_chr8_+_22225175 AK295807	-55082	+	TSC_hg19_v1_chr8_+_22225050 NM_001135153	-55225	+	TSC_hg19_v1_chr8_+_22224790 AK172810 BC015770 D31887	-55412	+	AK055013 TSC_hg19_v1_chr8_+_22298511 NM_001243974 NM_001243975 NM_005605	18189	+	TSC_hg19_v1_chr8_+_22298590 BC004864 S46622 AK299415	18380	+	TSC_hg19_v1_chr8_+_22298813 AY007249 AB385002 CU678778	18587	+	AK295807|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##NM_001135153|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##AK172810|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##BC015770|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##D31887|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##AK055013|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##NM_001243974|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##NM_001243975|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##NM_005605|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##BC004864|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##S46622|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##AK299415|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##AY007249|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme	0.920754	CTCF.p2:-2:0.921
chr2	216887882	216888034	reg1011585.p1	10.846	+	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	-9622	-	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-587176	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-587438	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	58586	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	58734	+	TSC_hg19_v1_chr2_+_216974084 NM_021141	86094	+	AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169##NM_021141|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)	0.98511	CTCF.p2:3:0.985
chr7	35577159	35577257	reg1008620.p1	10.846	+	TSC_hg19_v1_chr7_-_35293701 NM_001077653 NM_001166220 DQ986374	-283478	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	-351416	-	DQ287932 NM_015283	-499556	-	TSC_hg19_v1_chr7_-_35734533 BC005091	157388	-	BC020264 TSC_hg19_v1_chr7_-_35734751 AK055708	157531	-	TSC_hg19_v1_chr7_-_35734795 NM_022373	157570	-	NM_001077653|TBX20|57057|T-box 20##NM_001166220|TBX20|57057|T-box 20##DQ986374|TBX20|57057|T-box 20##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC005091|HERPUD2|64224|HERPUD family member 2##BC020264|HERPUD2|64224|HERPUD family member 2##AK055708|HERPUD2|64224|HERPUD family member 2##NM_022373|HERPUD2|64224|HERPUD family member 2	0.830674	CTCF.p2:9:0.831
chr17	28667257	28667376	reg1008161.p1	10.845	+	AK290266 BC137201 BC137202 AY358153 NM_206832 AK172838	-6254	-	NM_000386 TSC_hg19_v1_chr17_-_28619220	-48113	-	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	-48357	-	TSC_hg19_v1_chr17_+_28705953 NM_001304 BC051702 BC045549 BC054116	38623	+	TSC_hg19_v1_chr17_+_28705963 D85390 BC045624	38650	+	TSC_hg19_v1_chr17_+_28705984 U65090 AB385118	38673	+	AK290266|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##BC137201|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##BC137202|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##AY358153|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##NM_206832|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##AK172838|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##NM_000386|BLMH|642|bleomycin hydrolase##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase##NM_001304|CPD|1362|carboxypeptidase D##BC051702|CPD|1362|carboxypeptidase D##BC045549|CPD|1362|carboxypeptidase D##BC054116|CPD|1362|carboxypeptidase D##D85390|CPD|1362|carboxypeptidase D##BC045624|CPD|1362|carboxypeptidase D##U65090|CPD|1362|carboxypeptidase D	0.075901	
chr18	11154506	11154636	reg1007525.p2	10.845	+	NM_022068	-5811	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-628474	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-628515	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	534641	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	596944	+	L10665 TSC_hg19_v1_chr18_+_11752245	597644	+	NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.928908	CTCF.p2:12:0.929
chr17	65555583	65555714	reg1012260.p1	10.844	+	BC007905 NM_012417 NM_181671	-181725	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-182060	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-182239	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	158402	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	266054	+	AK293224 TSC_hg19_v1_chr17_+_65822221	266569	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.900505	CTCF.p2:0:0.901
chr19	46073259	46073401	reg1010976.p1	10.844	+	TSC_hg19_v1_chr19_+_46010748 BC026019 BC038224 Z46389	-62557	+	TSC_hg19_v1_chr19_+_46010736 AK314812	-62607	+	TSC_hg19_v1_chr19_+_46010688 NM_003370	-62642	+	AB528200 AM392686 EU832556 TSC_hg19_v1_chr19_-_46088061 BC064146 BC005059 BC047316	14712	-	TSC_hg19_v1_chr19_-_46088075 AK025840	14748	-	TSC_hg19_v1_chr19_-_46088084 AK098798 NM_001017989 NM_025136	14774	-	BC026019|VASP|7408|vasodilator-stimulated phosphoprotein##BC038224|VASP|7408|vasodilator-stimulated phosphoprotein##Z46389|VASP|7408|vasodilator-stimulated phosphoprotein##AK314812|VASP|7408|vasodilator-stimulated phosphoprotein##NM_003370|VASP|7408|vasodilator-stimulated phosphoprotein##AM392686|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##EU832556|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC064146|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC005059|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC047316|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##AK025840|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##AK098798|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##NM_001017989|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##NM_025136|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)	0.934097	CTCF.p2:20:0.934
chr12	107525692	107525799	reg1009229.p1	10.843	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-38135	-	BC030519 TSC_hg19_v1_chr12_-_107487328 D83702	-38412	-	TSC_hg19_v1_chr12_-_107380925 BC036066 BC068468 AK222558 AY008301 BC050361 BC025984 AK024124 NM_001033050 NM_025198	-144847	-	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	186468	+	AK127295 NM_001017523	448888	+	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	553922	+	NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##BC030519|CRY1|1407|cryptochrome 1 (photolyase-like)##D83702|CRY1|1407|cryptochrome 1 (photolyase-like)##BC036066|MTERFD3|80298|MTERF domain containing 3##BC068468|MTERFD3|80298|MTERF domain containing 3##AK222558|MTERFD3|80298|MTERF domain containing 3##AY008301|MTERFD3|80298|MTERF domain containing 3##BC050361|MTERFD3|80298|MTERF domain containing 3##BC025984|MTERFD3|80298|MTERF domain containing 3##AK024124|MTERFD3|80298|MTERF domain containing 3##NM_001033050|MTERFD3|80298|MTERF domain containing 3##NM_025198|MTERFD3|80298|MTERF domain containing 3##BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)	0.988712	CTCF.p2:-1:0.989
chr15	63779609	63779744	reg1011206.p1	10.843	+	AK315769 NM_001218 NM_206925 TSC_hg19_v1_chr15_-_63674076	-105601	-	BT006656 DQ893188 DQ896511 EU831616 EU831623 EU831703 EU831708 AF051882 BC000278 AF037335 BC011691 TSC_hg19_v1_chr15_-_63674046 AK096845 BC023981	-105684	-	NM_001145646 NM_031301 TSC_hg19_v1_chr15_+_63569803 AK291204 AL136671 BC020905 AB189172 AB197122 AF508794 AX776001 AY358698 AB528062 AM392724 AM392878 DQ891401 CU676772 AK307725	-209863	+	TSC_hg19_v1_chr15_+_63796791 AK314223	17106	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	17201	+	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	109903	+	AK315769|CA12|771|carbonic anhydrase XII##NM_001218|CA12|771|carbonic anhydrase XII##NM_206925|CA12|771|carbonic anhydrase XII##BT006656|CA12|771|carbonic anhydrase XII##DQ893188|CA12|771|carbonic anhydrase XII##DQ896511|CA12|771|carbonic anhydrase XII##EU831616|CA12|771|carbonic anhydrase XII##EU831623|CA12|771|carbonic anhydrase XII##EU831703|CA12|771|carbonic anhydrase XII##EU831708|CA12|771|carbonic anhydrase XII##AF051882|CA12|771|carbonic anhydrase XII##BC000278|CA12|771|carbonic anhydrase XII##AF037335|CA12|771|carbonic anhydrase XII##BC011691|CA12|771|carbonic anhydrase XII##AK096845|CA12|771|carbonic anhydrase XII##BC023981|CA12|771|carbonic anhydrase XII##NM_001145646|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##NM_031301|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK291204|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AL136671|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##BC020905|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB189172|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB197122|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AF508794|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AY358698|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392724|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392878|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##DQ891401|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK307725|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK314223|USP3|9960|ubiquitin specific peptidase 3##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22	0.132798	
chr3	48315234	48315373	reg1011914.p1	10.843	+	TSC_hg19_v1_chr3_+_48282593 BC028160 BC062690 AK298782 AY258146 NM_016089 AL832831 BC006247 BC048798 BC005859 AF114816 AF114817 AB463372	-32693	+	NM_004345 BC055089 X89658 U19970 CU691114 AB590666 AY251531 Z38026 AY162210 CR457083 CR541961	-50385	+	BC007401 BC018642 NM_001789 NM_201567 TSC_hg19_v1_chr3_-_48229900 M81933	-85444	-	DQ892283 DQ895483 AK308970 AF051941 TSC_hg19_v1_chr3_-_48342858 U90449 BC001808 BC012828 NM_005793 AK222555 AK294809 AK307332 AK297364 AK309090	27548	-	NM_001080525	54527	-	AY247969 NM_001159927 NM_001159929 NM_207102 BC101303 BC101304 BC101305 BC101306	98433	+	BC028160|ZNF589|51385|zinc finger protein 589##BC062690|ZNF589|51385|zinc finger protein 589##AK298782|ZNF589|51385|zinc finger protein 589##AY258146|ZNF589|51385|zinc finger protein 589##NM_016089|ZNF589|51385|zinc finger protein 589##AL832831|ZNF589|51385|zinc finger protein 589##BC006247|ZNF589|51385|zinc finger protein 589##BC048798|ZNF589|51385|zinc finger protein 589##BC005859|ZNF589|51385|zinc finger protein 589##AF114816|ZNF589|51385|zinc finger protein 589##AF114817|ZNF589|51385|zinc finger protein 589##NM_004345|CAMP|820|cathelicidin antimicrobial peptide##BC055089|CAMP|820|cathelicidin antimicrobial peptide##X89658|CAMP|820|cathelicidin antimicrobial peptide##U19970|CAMP|820|cathelicidin antimicrobial peptide##AY251531|CAMP|820|cathelicidin antimicrobial peptide##Z38026|CAMP|820|cathelicidin antimicrobial peptide##AY162210|CAMP|820|cathelicidin antimicrobial peptide##CR457083|CAMP|820|cathelicidin antimicrobial peptide##CR541961|CAMP|820|cathelicidin antimicrobial peptide##BC007401|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##BC018642|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_001789|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_201567|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##M81933|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ892283|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##DQ895483|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK308970|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AF051941|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##U90449|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC001808|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC012828|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##NM_005793|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK222555|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK294809|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK297364|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)##AY247969|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12##NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12##BC101303|FBXW12|285231|F-box and WD repeat domain containing 12##BC101304|FBXW12|285231|F-box and WD repeat domain containing 12##BC101305|FBXW12|285231|F-box and WD repeat domain containing 12##BC101306|FBXW12|285231|F-box and WD repeat domain containing 12	0.991321	CTCF.p2:-9:0.991
chr19	18519129	18519241	reg1007393.p2	10.842	+	BC025744 TSC_hg19_v1_chr19_-_18508433 NM_145256 BC053659 BC033825	-10765	-	TSC_hg19_v1_chr19_+_18496967 AB000584 AK225425 AK225431 AK291530 NM_004864 BC008962 U88323 BC000529 AF019770 U51731 BT019465	-22203	+	TSC_hg19_v1_chr19_+_18451449 AK289968 NM_017712 AK294497 BC042138 BC028063 AJ278828 AK000215	-67778	+	TSC_hg19_v1_chr19_+_18530163 NM_001009998 NM_032627	10942	+	TSC_hg19_v1_chr19_+_18530224 BC000274 AK098429	11040	+	TSC_hg19_v1_chr19_+_18530425 CU674122 AB464208	11255	+	BC025744|LRRC25|126364|leucine rich repeat containing 25##NM_145256|LRRC25|126364|leucine rich repeat containing 25##BC053659|LRRC25|126364|leucine rich repeat containing 25##BC033825|LRRC25|126364|leucine rich repeat containing 25##AB000584|GDF15|9518|growth differentiation factor 15##AK225431|GDF15|9518|growth differentiation factor 15##AK291530|GDF15|9518|growth differentiation factor 15##NM_004864|GDF15|9518|growth differentiation factor 15##BC008962|GDF15|9518|growth differentiation factor 15##U88323|GDF15|9518|growth differentiation factor 15##BC000529|GDF15|9518|growth differentiation factor 15##AF019770|GDF15|9518|growth differentiation factor 15##U51731|GDF15|9518|growth differentiation factor 15##BT019465|GDF15|9518|growth differentiation factor 15##AK289968|PGPEP1|54858|pyroglutamyl-peptidase I##NM_017712|PGPEP1|54858|pyroglutamyl-peptidase I##AK294497|PGPEP1|54858|pyroglutamyl-peptidase I##BC042138|PGPEP1|54858|pyroglutamyl-peptidase I##BC028063|PGPEP1|54858|pyroglutamyl-peptidase I##AJ278828|PGPEP1|54858|pyroglutamyl-peptidase I##AK000215|PGPEP1|54858|pyroglutamyl-peptidase I##NM_001009998|SSBP4|170463|single stranded DNA binding protein 4##NM_032627|SSBP4|170463|single stranded DNA binding protein 4##BC000274|SSBP4|170463|single stranded DNA binding protein 4##AK098429|SSBP4|170463|single stranded DNA binding protein 4	0.767477	CTCF.p2:8:0.767
chr15	89959643	89959799	reg1008360.p1	10.841	+	TSC_hg19_v1_chr15_-_89878042 AK291281	-81678	-	BC050559 BC042571 NM_001126131 NM_002693 X98093 TSC_hg19_v1_chr15_-_89878036	-81700	-	TSC_hg19_v1_chr15_+_89787255 AK055176 BC140769 BC144483 BC004277	-172471	+	CU689056 AY257182 AF193809 NM_016321 BC015461 AK298252 AK298641 AF081497 AK301640 AK313238 BC030965 AK290899 AK310222	80074	-	TSC_hg19_v1_chr15_+_90118742 GQ227787 NM_152259	159057	+	TSC_hg19_v1_chr15_-_90198681 BC042063 NM_198525	238899	-	AK291281|POLG|5428|polymerase (DNA directed), gamma##BC050559|POLG|5428|polymerase (DNA directed), gamma##BC042571|POLG|5428|polymerase (DNA directed), gamma##NM_001126131|POLG|5428|polymerase (DNA directed), gamma##NM_002693|POLG|5428|polymerase (DNA directed), gamma##X98093|POLG|5428|polymerase (DNA directed), gamma##AK055176|FANCI|55215|Fanconi anemia, complementation group I##BC140769|FANCI|55215|Fanconi anemia, complementation group I##BC144483|FANCI|55215|Fanconi anemia, complementation group I##BC004277|FANCI|55215|Fanconi anemia, complementation group I##AY257182|RHCG|51458|Rh family, C glycoprotein##AF193809|RHCG|51458|Rh family, C glycoprotein##NM_016321|RHCG|51458|Rh family, C glycoprotein##BC015461|RHCG|51458|Rh family, C glycoprotein##AK298252|RHCG|51458|Rh family, C glycoprotein##AK298641|RHCG|51458|Rh family, C glycoprotein##AF081497|RHCG|51458|Rh family, C glycoprotein##AK301640|RHCG|51458|Rh family, C glycoprotein##AK313238|RHCG|51458|Rh family, C glycoprotein##BC030965|RHCG|51458|Rh family, C glycoprotein##AK290899|RHCG|51458|Rh family, C glycoprotein##AK310222|RHCG|51458|Rh family, C glycoprotein##GQ227787|C15orf42|90381|chromosome 15 open reading frame 42##NM_152259|C15orf42|90381|chromosome 15 open reading frame 42##BC042063|KIF7|374654|kinesin family member 7##NM_198525|KIF7|374654|kinesin family member 7	1.007812	CTCF.p2:-44:0.984
chrX	128860463	128860596	reg1010427.p1	10.841	+	BC021104 NM_017413	-71607	-	TSC_hg19_v1_chrX_+_128674247 AK226116 BC094726 NM_000276 NM_001587 U57627 AK293107 BC130612 BC144106 BC025253 AB384825	-186231	+	TSC_hg19_v1_chrX_-_128657468 NM_003069 NM_139035	-203067	-	AK300954 U90724 NM_003399 BC126174 BC143901	12447	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	53358	+	TSC_hg19_v1_chrX_+_128913898 AK314869 AK292023 BC051881 AL049683 AB528892	53455	+	BC021104|APLN|8862|apelin##NM_017413|APLN|8862|apelin##AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe##U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe##AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_003069|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_139035|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3##AK314869|SASH3|54440|SAM and SH3 domain containing 3##AK292023|SASH3|54440|SAM and SH3 domain containing 3##BC051881|SASH3|54440|SAM and SH3 domain containing 3##AL049683|SASH3|54440|SAM and SH3 domain containing 3	0.996449	CTCF.p2:7:0.996
chr10	134201582	134201656	reg1009849.p1	10.840	+	TSC_hg19_v1_chr10_+_134145696 AK098652 BC050097 AK295953 AB051461 BC029902 NM_001143757 AK097418	-55909	+	TSC_hg19_v1_chr10_+_134145617 NM_001143758 NM_001143759 NM_030626	-56005	+	TSC_hg19_v1_chr10_-_134145360 AK098366 AK308956 BC042566	-56273	-	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	9090	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	57064	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	149693	+	AK098652|LRRC27|80313|leucine rich repeat containing 27##BC050097|LRRC27|80313|leucine rich repeat containing 27##AK295953|LRRC27|80313|leucine rich repeat containing 27##AB051461|LRRC27|80313|leucine rich repeat containing 27##BC029902|LRRC27|80313|leucine rich repeat containing 27##NM_001143757|LRRC27|80313|leucine rich repeat containing 27##AK097418|LRRC27|80313|leucine rich repeat containing 27##NM_001143758|LRRC27|80313|leucine rich repeat containing 27##NM_001143759|LRRC27|80313|leucine rich repeat containing 27##NM_030626|LRRC27|80313|leucine rich repeat containing 27##AK098366|STK32C|282974|serine/threonine kinase 32C##AK308956|STK32C|282974|serine/threonine kinase 32C##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa	0.993411	CTCF.p2:24:0.993
chr15	74257204	74257336	reg1011199.p1	10.840	+	TSC_hg19_v1_chr15_+_74218979 DQ893331	-38229	+	TSC_hg19_v1_chr15_+_74218813 BC015090 L21186	-38455	+	TSC_hg19_v1_chr15_+_74218802 BC068542 AK303982 AK314222	-38469	+	AL109664 AF074953 AL109665 CR542089 DQ064605 AB587381 AK300799 AK222665 AK075244 Y16522 BC034379 BC065249 NM_004809 AF111800 AK302051 TSC_hg19_v1_chr15_-_74284672 AF156557	27333	-	TSC_hg19_v1_chr15_-_74286928 AK091531	29664	-	TSC_hg19_v1_chr15_+_74287096 NM_002675 NM_033238 NM_033239 NM_033240 NM_033244 NM_033246 NM_033247 NM_033249 NM_033250 X63131 AB209411 S50913 M73778 AF230401 AF230402 AF230403 AF230404 AF230405 AF230406 AF230407 AF230408 AF230409 AF230410 AF230411 BC000080 BC020994	29780	+	DQ893331|LOXL1|4016|lysyl oxidase-like 1##BC015090|LOXL1|4016|lysyl oxidase-like 1##L21186|LOXL1|4016|lysyl oxidase-like 1##BC068542|LOXL1|4016|lysyl oxidase-like 1##AK303982|LOXL1|4016|lysyl oxidase-like 1##AK314222|LOXL1|4016|lysyl oxidase-like 1##AL109664|STOML1|9399|stomatin (EPB72)-like 1##AF074953|STOML1|9399|stomatin (EPB72)-like 1##AL109665|STOML1|9399|stomatin (EPB72)-like 1##CR542089|STOML1|9399|stomatin (EPB72)-like 1##DQ064605|STOML1|9399|stomatin (EPB72)-like 1##AK300799|STOML1|9399|stomatin (EPB72)-like 1##AK222665|STOML1|9399|stomatin (EPB72)-like 1##AK075244|STOML1|9399|stomatin (EPB72)-like 1##Y16522|STOML1|9399|stomatin (EPB72)-like 1##BC034379|STOML1|9399|stomatin (EPB72)-like 1##BC065249|STOML1|9399|stomatin (EPB72)-like 1##NM_004809|STOML1|9399|stomatin (EPB72)-like 1##AF111800|STOML1|9399|stomatin (EPB72)-like 1##AK302051|STOML1|9399|stomatin (EPB72)-like 1##AF156557|STOML1|9399|stomatin (EPB72)-like 1##AK091531|STOML1|9399|stomatin (EPB72)-like 1##NM_002675|PML|5371|promyelocytic leukemia##NM_033238|PML|5371|promyelocytic leukemia##NM_033239|PML|5371|promyelocytic leukemia##NM_033240|PML|5371|promyelocytic leukemia##NM_033244|PML|5371|promyelocytic leukemia##NM_033246|PML|5371|promyelocytic leukemia##NM_033247|PML|5371|promyelocytic leukemia##NM_033249|PML|5371|promyelocytic leukemia##NM_033250|PML|5371|promyelocytic leukemia##X63131|PML|5371|promyelocytic leukemia##AB209411|PML|5371|promyelocytic leukemia##S50913|PML|5371|promyelocytic leukemia##M73778|PML|5371|promyelocytic leukemia##AF230401|PML|5371|promyelocytic leukemia##AF230402|PML|5371|promyelocytic leukemia##AF230403|PML|5371|promyelocytic leukemia##AF230404|PML|5371|promyelocytic leukemia##AF230405|PML|5371|promyelocytic leukemia##AF230406|PML|5371|promyelocytic leukemia##AF230407|PML|5371|promyelocytic leukemia##AF230408|PML|5371|promyelocytic leukemia##AF230409|PML|5371|promyelocytic leukemia##AF230410|PML|5371|promyelocytic leukemia##AF230411|PML|5371|promyelocytic leukemia##BC000080|PML|5371|promyelocytic leukemia##BC020994|PML|5371|promyelocytic leukemia	1.320054	CTCF.p2:-11:0.999	CTCF.p2:-48:0.322
chr19	4370044	4370161	reg1007969.p2	10.840	+	NM_001159846 NM_032868 AK027887 AK308468 TSC_hg19_v1_chr19_+_4343562 BC032652	-26543	+	TSC_hg19_v1_chr19_-_4342718 AK125774	-27352	-	AB527779 TSC_hg19_v1_chr19_-_4338790 BC000795 AJ245719 AK000241 NM_001013841 NM_017720	-31304	-	TSC_hg19_v1_chr19_-_4400419 AY364240 CR542087 AB527297 DQ891258 DQ894444 U65999 X99656 AK097616 NM_001199944	30291	-	BC001270 TSC_hg19_v1_chr19_-_4400513 AK315450 BC098565 AK299166 NM_001199943 NM_003025	30451	-	BC067093 NM_005483 BC052620 TSC_hg19_v1_chr19_+_4402664 BC041606 AB527824 U20979 BC005813 BC011560	32614	+	NM_001159846|MPND|84954|MPN domain containing##NM_032868|MPND|84954|MPN domain containing##AK027887|MPND|84954|MPN domain containing##AK308468|MPND|84954|MPN domain containing##BC032652|MPND|84954|MPN domain containing##AK125774|STAP2|55620|signal transducing adaptor family member 2##BC000795|STAP2|55620|signal transducing adaptor family member 2##AJ245719|STAP2|55620|signal transducing adaptor family member 2##AK000241|STAP2|55620|signal transducing adaptor family member 2##NM_001013841|STAP2|55620|signal transducing adaptor family member 2##NM_017720|STAP2|55620|signal transducing adaptor family member 2##AY364240|SH3GL1|6455|SH3-domain GRB2-like 1##CR542087|SH3GL1|6455|SH3-domain GRB2-like 1##DQ891258|SH3GL1|6455|SH3-domain GRB2-like 1##DQ894444|SH3GL1|6455|SH3-domain GRB2-like 1##U65999|SH3GL1|6455|SH3-domain GRB2-like 1##X99656|SH3GL1|6455|SH3-domain GRB2-like 1##AK097616|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199944|SH3GL1|6455|SH3-domain GRB2-like 1##BC001270|SH3GL1|6455|SH3-domain GRB2-like 1##AK315450|SH3GL1|6455|SH3-domain GRB2-like 1##BC098565|SH3GL1|6455|SH3-domain GRB2-like 1##AK299166|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199943|SH3GL1|6455|SH3-domain GRB2-like 1##NM_003025|SH3GL1|6455|SH3-domain GRB2-like 1##BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	0.901351	CTCF.p2:0:0.560	CTCF.p2:55:0.341
chr20	7266684	7266821	reg1009839.p1	10.840	+	BC069214 NM_001200	-518008	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-1162589	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-1162875	-	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	654350	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	733548	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	733655	-	BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4	0.982476	CTCF.p2:7:0.982
chr15	45077007	45077114	reg1008243.p2	10.839	+	NM_080745 NM_182985	-48501	+	BC031266 TSC_hg19_v1_chr15_+_45021331	-55729	+	AK311550 TSC_hg19_v1_chr15_+_45021275 DQ232883	-55807	+	BC029537 NM_152448 DQ890983 DQ894158	171848	+	NM_003104 TSC_hg19_v1_chr15_+_45315395 AK312444 U07361 L29008 BC021085 AK295656 AK296574 AK309672 BC025295 AB529056 DQ892769 DQ896016	238330	+	TSC_hg19_v1_chr15_-_45406336 AF230496	329271	-	NM_080745|TRIM69|140691|tripartite motif containing 69##NM_182985|TRIM69|140691|tripartite motif containing 69##BC031266|TRIM69|140691|tripartite motif containing 69##DQ232883|TRIM69|140691|tripartite motif containing 69##BC029537|C15orf43|145645|chromosome 15 open reading frame 43##NM_152448|C15orf43|145645|chromosome 15 open reading frame 43##DQ890983|C15orf43|145645|chromosome 15 open reading frame 43##DQ894158|C15orf43|145645|chromosome 15 open reading frame 43##NM_003104|SORD|6652|sorbitol dehydrogenase##AK312444|SORD|6652|sorbitol dehydrogenase##U07361|SORD|6652|sorbitol dehydrogenase##L29008|SORD|6652|sorbitol dehydrogenase##BC021085|SORD|6652|sorbitol dehydrogenase##AK296574|SORD|6652|sorbitol dehydrogenase##AK309672|SORD|6652|sorbitol dehydrogenase##BC025295|SORD|6652|sorbitol dehydrogenase##DQ892769|SORD|6652|sorbitol dehydrogenase##DQ896016|SORD|6652|sorbitol dehydrogenase##AF230496|DUOX2|50506|dual oxidase 2	0.712434	CTCF.p2:13:0.712
chr7	99956268	99956399	reg1007291.p1	10.839	+	AJ400845 NM_178238 AF161081	-702	+	TSC_hg19_v1_chr7_+_99933808 AL834317	-22511	+	TSC_hg19_v1_chr7_+_99933747 AK056412 AK310352	-22578	+	AF161080 NM_013439 NM_178272 NM_178273 BC017812 TSC_hg19_v1_chr7_+_99971109 AJ400841	14763	+	TSC_hg19_v1_chr7_+_99971132 AJ400842 AJ400843 AK298731 AB590724 CU676074	14872	+	AK302108 AK300745 TSC_hg19_v1_chr7_-_100026299 AL136735 NM_017984 AK299989	69969	-	AJ400845|PILRB|29990|paired immunoglobin-like type 2 receptor beta##NM_178238|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AF161081|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AL834317|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AK056412|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AK310352|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AF161080|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_013439|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178272|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178273|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##BC017812|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400841|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400842|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400843|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AK298731|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AK302108|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##AK300745|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##AL136735|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##NM_017984|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##AK299989|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1	0.600533	CTCF.p2:-21:0.601
chr2	11272863	11272979	reg1009180.p2	10.838	+	BC026110 NM_002236 TSC_hg19_v1_chr2_+_11052109	-220836	+	TSC_hg19_v1_chr2_-_10952912 AK294347 D49489 BC001312 NM_005742	-320001	-	TSC_hg19_v1_chr2_-_10952851 DQ891186 DQ894369 AK289428	-320093	-	AK057872 NM_182500 BC120930 AK292828	295	+	BC027625 NM_152391 TSC_hg19_v1_chr2_+_11295562	22630	+	TSC_hg19_v1_chr2_+_11295592 AK001091	22660	+	BC026110|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##NM_002236|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6##D49489|PDIA6|10130|protein disulfide isomerase family A, member 6##BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6##NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6##AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6##AK057872|C2orf50|130813|chromosome 2 open reading frame 50##NM_182500|C2orf50|130813|chromosome 2 open reading frame 50##BC120930|C2orf50|130813|chromosome 2 open reading frame 50##AK292828|C2orf50|130813|chromosome 2 open reading frame 50##BC027625|PQLC3|130814|PQ loop repeat containing 3##NM_152391|PQLC3|130814|PQ loop repeat containing 3##AK001091|PQLC3|130814|PQ loop repeat containing 3	0.988979	CTCF.p2:-8:0.989
chr2	25451772	25451902	reg1012172.p1	10.838	+	NM_000939 NM_001035256	-60279	-	TSC_hg19_v1_chr2_+_25264954 NM_014971 AB023170	-186860	+	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	-256970	-	TSC_hg19_v1_chr2_-_25466801 BC018214	14971	-	TSC_hg19_v1_chr2_-_25467080 BC023612	15298	-	TSC_hg19_v1_chr2_-_25468920 AK025230	17141	-	NM_000939|POMC|5443|proopiomelanocortin##NM_001035256|POMC|5443|proopiomelanocortin##NM_014971|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AB023170|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC018214|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.026238	
chr11	34947771	34947917	reg1011415.p1	10.837	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-9687	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-9955	-	NM_001135024 NM_001166158 NM_003477	-10168	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	212556	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	212890	+	TSC_hg19_v1_chr11_+_35160821 M59040	212974	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.983611	CTCF.p2:-20:0.984
chr19	54296333	54296455	reg1008867.p1	10.837	+	NM_001012728	-161085	+	AF412400 AF412401 NM_001079907	-237868	+	AF272148 NM_001253801	-238496	+	AF231021 NM_033297	15564	-	CU688384 DQ891084 DQ894266 AK290772 BC028069 AK095460 AY095146 AY154467 AY116204 AY116205 AY116206 AY116207 NM_144687	31143	-	NM_001020820 TSC_hg19_v1_chr19_+_54369637	73237	+	NM_001012728|DPRX|503834|divergent-paired related homeobox##AF412400|ZNF331|55422|zinc finger protein 331##AF412401|ZNF331|55422|zinc finger protein 331##NM_001079907|ZNF331|55422|zinc finger protein 331##AF272148|ZNF331|55422|zinc finger protein 331##NM_001253801|ZNF331|55422|zinc finger protein 331##AF231021|NLRP12|91662|NLR family, pyrin domain containing 12##NM_033297|NLRP12|91662|NLR family, pyrin domain containing 12##DQ891084|NLRP12|91662|NLR family, pyrin domain containing 12##DQ894266|NLRP12|91662|NLR family, pyrin domain containing 12##AK290772|NLRP12|91662|NLR family, pyrin domain containing 12##BC028069|NLRP12|91662|NLR family, pyrin domain containing 12##AK095460|NLRP12|91662|NLR family, pyrin domain containing 12##AY095146|NLRP12|91662|NLR family, pyrin domain containing 12##AY154467|NLRP12|91662|NLR family, pyrin domain containing 12##AY116204|NLRP12|91662|NLR family, pyrin domain containing 12##AY116205|NLRP12|91662|NLR family, pyrin domain containing 12##AY116206|NLRP12|91662|NLR family, pyrin domain containing 12##AY116207|NLRP12|91662|NLR family, pyrin domain containing 12##NM_144687|NLRP12|91662|NLR family, pyrin domain containing 12##NM_001020820|MYADM|91663|myeloid-associated differentiation marker	1.014359	CTCF.p2:-34:0.999
chr14	60531353	60531481	reg1010864.p1	10.836	+	AB587373 TSC_hg19_v1_chr14_-_60337495 BC111694 L10333 BC090862 BC068510 NM_021136	-193964	-	AK290534 NM_206852 TSC_hg19_v1_chr14_-_60097533	-433884	-	TSC_hg19_v1_chr14_-_60097342 BC000314 BC003003 AK297492	-434073	-	NM_022495 TSC_hg19_v1_chr14_+_60558640 AK095489	27410	+	AY359031 TSC_hg19_v1_chr14_-_60632031 BC000637	100615	-	TSC_hg19_v1_chr14_-_60632103 BC007337 AF151844 AK313285 AL117420 NM_016029	100717	-	BC111694|RTN1|6252|reticulon 1##L10333|RTN1|6252|reticulon 1##BC090862|RTN1|6252|reticulon 1##BC068510|RTN1|6252|reticulon 1##NM_021136|RTN1|6252|reticulon 1##AK290534|RTN1|6252|reticulon 1##NM_206852|RTN1|6252|reticulon 1##BC000314|RTN1|6252|reticulon 1##BC003003|RTN1|6252|reticulon 1##AK297492|RTN1|6252|reticulon 1##NM_022495|C14orf135|64430|chromosome 14 open reading frame 135##AK095489|C14orf135|64430|chromosome 14 open reading frame 135##AY359031|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC000637|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC007337|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AF151844|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AK313285|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AL117420|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_016029|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7	0.0	
chr17	57936918	57937027	reg1007889.p2	10.836	+	TSC_hg19_v1_chr17_+_57915291 AK310806	-21666	+	TSC_hg19_v1_chr17_+_57785080 AK293664	-151899	+	AK294854 TSC_hg19_v1_chr17_+_57785025 AF214006 AX775965	-151937	+	AK024096 AK298492 AK301312 BC000258 AK022771 AK315172 NM_001193609 NM_001193610 NM_001193611 NM_001193612 NM_001193613 NM_016261	33219	-	NM_003161 BC036033 TSC_hg19_v1_chr17_+_57970481 AK293247	33490	+	TSC_hg19_v1_chr17_+_57970492 AK300202 AK312875 BC053365 M60724 AB384946 CU690966 AK297147	33570	+	AK293664|VMP1|81671|vacuole membrane protein 1##AK294854|VMP1|81671|vacuole membrane protein 1##AF214006|VMP1|81671|vacuole membrane protein 1##AX775965|VMP1|81671|vacuole membrane protein 1##AK024096|TUBD1|51174|tubulin, delta 1##AK298492|TUBD1|51174|tubulin, delta 1##AK301312|TUBD1|51174|tubulin, delta 1##BC000258|TUBD1|51174|tubulin, delta 1##AK022771|TUBD1|51174|tubulin, delta 1##AK315172|TUBD1|51174|tubulin, delta 1##NM_001193609|TUBD1|51174|tubulin, delta 1##NM_001193610|TUBD1|51174|tubulin, delta 1##NM_001193611|TUBD1|51174|tubulin, delta 1##NM_001193612|TUBD1|51174|tubulin, delta 1##NM_001193613|TUBD1|51174|tubulin, delta 1##NM_016261|TUBD1|51174|tubulin, delta 1##NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK300202|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK312875|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC053365|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##M60724|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK297147|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	0.02359	
chr5	671827	671944	reg1010873.p1	10.836	+	TSC_hg19_v1_chr5_+_612458 AK001427 BC000132 AB040952 AB384228 AK299072 CU674056 BC001750	-59419	+	NM_018140 TSC_hg19_v1_chr5_+_612451	-59457	+	BC101669 BC101671 BC143328 U28043 BC011555 NM_004174 TSC_hg19_v1_chr5_-_524565	-147380	-	TSC_hg19_v1_chr5_-_693430 AB017016 BC040496 AK098392 NM_007030	21576	-	AK023215 NM_024786	179215	-	TSC_hg19_v1_chr5_-_892666 BX648703 AK297573 AK301987 NM_001009877	220764	-	AK001427|CEP72|55722|centrosomal protein 72kDa##BC000132|CEP72|55722|centrosomal protein 72kDa##AB040952|CEP72|55722|centrosomal protein 72kDa##AK299072|CEP72|55722|centrosomal protein 72kDa##BC001750|CEP72|55722|centrosomal protein 72kDa##NM_018140|CEP72|55722|centrosomal protein 72kDa##BC101669|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC101671|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC143328|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##U28043|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC011555|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##NM_004174|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##AB017016|TPPP|11076|tubulin polymerization promoting protein##BC040496|TPPP|11076|tubulin polymerization promoting protein##AK098392|TPPP|11076|tubulin polymerization promoting protein##NM_007030|TPPP|11076|tubulin polymerization promoting protein##AK023215|ZDHHC11|79844|zinc finger, DHHC-type containing 11##NM_024786|ZDHHC11|79844|zinc finger, DHHC-type containing 11##BX648703|BRD9|65980|bromodomain containing 9##AK297573|BRD9|65980|bromodomain containing 9##AK301987|BRD9|65980|bromodomain containing 9##NM_001009877|BRD9|65980|bromodomain containing 9	0.014514	
chrX	52950444	52950621	reg1008045.p1	10.836	+	AL834135 NM_001099684	-22124	+	TSC_hg19_v1_chrX_+_52926366 AK091598 AX747084	-24141	+	TSC_hg19_v1_chrX_+_52926355 AK057692 BX649013	-24188	+	AL834135 NM_001099684	35096	-	AK091598 AX747084 BX649013 CR749619 TSC_hg19_v1_chrX_-_52987693 AK057692 NM_001242491	37130	-	BC067819 NM_001242489 NM_001242490 NM_001242492 NM_001242493 NM_001242494 NM_001242495 NM_001242496 NM_001242497 NM_014138	74114	-	AL834135|FAM156A|29057|family with sequence similarity 156, member A##NM_001099684|FAM156B|727866|family with sequence similarity 156, member B##AK091598|FAM156B|727866|family with sequence similarity 156, member B##AK057692|FAM156A|29057|family with sequence similarity 156, member A##BX649013|FAM156B|727866|family with sequence similarity 156, member B##AL834135|FAM156A|29057|family with sequence similarity 156, member A##NM_001099684|FAM156B|727866|family with sequence similarity 156, member B##AK091598|FAM156B|727866|family with sequence similarity 156, member B##BX649013|FAM156B|727866|family with sequence similarity 156, member B##CR749619|FAM156A|29057|family with sequence similarity 156, member A##AK057692|FAM156A|29057|family with sequence similarity 156, member A##NM_001242491|FAM156A|29057|family with sequence similarity 156, member A##BC067819|FAM156A|29057|family with sequence similarity 156, member A##NM_001242489|FAM156A|29057|family with sequence similarity 156, member A##NM_001242490|FAM156A|29057|family with sequence similarity 156, member A##NM_001242492|FAM156A|29057|family with sequence similarity 156, member A##NM_001242493|FAM156A|29057|family with sequence similarity 156, member A##NM_001242494|FAM156A|29057|family with sequence similarity 156, member A##NM_001242495|FAM156A|29057|family with sequence similarity 156, member A##NM_001242496|FAM156A|29057|family with sequence similarity 156, member A##NM_001242497|FAM156A|29057|family with sequence similarity 156, member A##NM_014138|FAM156A|29057|family with sequence similarity 156, member A	0.984647	CTCF.p2:-52:0.985
chr11	62264705	62264840	reg1012119.p1	10.835	+	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	-78236	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	-159824	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	-159947	+	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	49464	-	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	49542	-	DQ185040 BT006677 CR407625 BC006509 BC006520 CU674184 CU677463 CU680700 BC000384 DQ891103 DQ894284 Z11531 AB527934 BC009865 BC015813 BC018857 BC018853 BC028179 TSC_hg19_v1_chr11_-_62341334 BC013918 AK092787 AK299876 AY542307 BC067738 AK129569 AK129618 AK300729 X63526 AK130026 AK300686 BC031012	76552	-	AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein##DQ185040|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BT006677|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##CR407625|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006509|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006520|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC000384|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ891103|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ894284|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##Z11531|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC009865|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC015813|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018857|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018853|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC028179|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC013918|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK092787|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK299876|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AY542307|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC067738|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129569|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129618|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300729|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##X63526|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK130026|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300686|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC031012|EEF1G|1937|eukaryotic translation elongation factor 1 gamma	0.544339	CTCF.p2:-1:0.544
chr15	73533364	73533483	reg1010946.p1	10.835	+	NM_001172623 NM_001172624 NM_002499 U61262 U72391 BC117161 BC143270 BC143271 BC143279 AB528479	-188503	+	TSC_hg19_v1_chr15_-_73076118 AK055526 NM_031284	-457300	-	BC044589 TSC_hg19_v1_chr15_-_73076072	-457352	-	TSC_hg19_v1_chr15_-_73661207 AJ132429 DQ854814	127784	-	AJ238850 NM_005477	128181	-	NM_001042367 AK131030 BC055412	202086	+	NM_001172623|NEO1|4756|neogenin 1##NM_001172624|NEO1|4756|neogenin 1##NM_002499|NEO1|4756|neogenin 1##U61262|NEO1|4756|neogenin 1##U72391|NEO1|4756|neogenin 1##BC117161|NEO1|4756|neogenin 1##BC143270|NEO1|4756|neogenin 1##BC143271|NEO1|4756|neogenin 1##BC143279|NEO1|4756|neogenin 1##AK055526|ADPGK|83440|ADP-dependent glucokinase##NM_031284|ADPGK|83440|ADP-dependent glucokinase##BC044589|ADPGK|83440|ADP-dependent glucokinase##AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60##AK131030|C15orf60|283677|chromosome 15 open reading frame 60##BC055412|C15orf60|283677|chromosome 15 open reading frame 60	0.999823	CTCF.p2:-10:1.000
chr6	110849396	110849545	reg1011419.p1	10.835	+	TSC_hg19_v1_chr6_-_110797837 BC047565 NM_033125	-51607	-	TSC_hg19_v1_chr6_-_110797817 AK304546	-51652	-	BC012014 AF268892 AY145502 BC037247 TSC_hg19_v1_chr6_-_110797794	-51682	-	AK304351 TSC_hg19_v1_chr6_+_111135843	286363	+	BC047513 TSC_hg19_v1_chr6_-_111136246	286748	-	AJ420571 TSC_hg19_v1_chr6_-_111136300	286829	-	BC047565|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##NM_033125|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304546|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC012014|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AF268892|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AY145502|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC037247|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304351|AMD1|262|adenosylmethionine decarboxylase 1##BC047513|CDK19|23097|cyclin-dependent kinase 19##AJ420571|CDK19|23097|cyclin-dependent kinase 19	0.998601	CTCF.p2:-16:0.999
chr17	18615835	18615953	reg1009944.p1	10.833	+	NM_001145045	-30323	-	NM_001039397	-68155	-	BC101585 BC104815 BC143561 TSC_hg19_v1_chr17_-_18528914 BC062767 BX647826 AK093811 AX748319	-86987	-	AK301647 DQ232882 NM_001037330 AK316368 AK301639 AK298836 BC146902 BC146907	9522	+	NM_031456 BC028364 AK310383 AL136822	31462	+	TSC_hg19_v1_chr17_+_18684595 BC008430 NM_016078 AK290813 BX537929 BX648167	68708	+	NM_001145045|ZNF286B|729288|zinc finger protein 286B##NM_001039397|TBC1D28|254272|TBC1 domain family, member 28##BC101585|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC104815|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC143561|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC062767|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BX647826|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##AK093811|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##AK301647|TRIM16L|147166|tripartite motif containing 16-like##DQ232882|TRIM16L|147166|tripartite motif containing 16-like##NM_001037330|TRIM16L|147166|tripartite motif containing 16-like##AK316368|TRIM16L|147166|tripartite motif containing 16-like##AK301639|TRIM16L|147166|tripartite motif containing 16-like##AK298836|TRIM16L|147166|tripartite motif containing 16-like##BC146902|TRIM16L|147166|tripartite motif containing 16-like##BC146907|TRIM16L|147166|tripartite motif containing 16-like##NM_031456|FBXW10|10517|F-box and WD repeat domain containing 10##BC028364|FBXW10|10517|F-box and WD repeat domain containing 10##AK310383|FBXW10|10517|F-box and WD repeat domain containing 10##AL136822|FBXW10|10517|F-box and WD repeat domain containing 10##BC008430|FAM18B1|51030|family with sequence similarity 18, member B1##NM_016078|FAM18B1|51030|family with sequence similarity 18, member B1##AK290813|FAM18B1|51030|family with sequence similarity 18, member B1##BX537929|FAM18B1|51030|family with sequence similarity 18, member B1##BX648167|FAM18B1|51030|family with sequence similarity 18, member B1	0.980563	CTCF.p2:-5:0.981
chr12	51380875	51380996	reg1011245.p1	10.832	+	NM_001109619	-33154	+	TSC_hg19_v1_chr12_+_51318801 AY358797 AK024409 AK307071 AK225689 AK225595 AK023693 AK293356 AJ536233 BC008180 BC004492 AB590800 EU832657 EU832734 AL050159 AF113007	-62134	+	TSC_hg19_v1_chr12_+_51318519 NM_014033	-62411	+	TSC_hg19_v1_chr12_-_51402997 AK316507	22071	-	TSC_hg19_v1_chr12_-_51403037 AK296445 NM_001174130	22107	-	AK094735 NM_001174129	38988	-	NM_001109619|HIGD1C|613227|HIG1 hypoxia inducible domain family, member 1C##AY358797|METTL7A|25840|methyltransferase like 7A##AK024409|METTL7A|25840|methyltransferase like 7A##AK307071|METTL7A|25840|methyltransferase like 7A##AK225689|METTL7A|25840|methyltransferase like 7A##AK225595|METTL7A|25840|methyltransferase like 7A##AK023693|METTL7A|25840|methyltransferase like 7A##AK293356|METTL7A|25840|methyltransferase like 7A##AJ536233|METTL7A|25840|methyltransferase like 7A##BC008180|METTL7A|25840|methyltransferase like 7A##BC004492|METTL7A|25840|methyltransferase like 7A##EU832657|METTL7A|25840|methyltransferase like 7A##EU832734|METTL7A|25840|methyltransferase like 7A##AL050159|METTL7A|25840|methyltransferase like 7A##AF113007|METTL7A|25840|methyltransferase like 7A##NM_014033|METTL7A|25840|methyltransferase like 7A##AK316507|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AK296445|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174130|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AK094735|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174129|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2	0.144185	
chr4	124024171	124024337	reg1010240.p1	10.832	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-180002	+	AF019632 AK294450 NM_198041	-180114	-	TSC_hg19_v1_chr4_-_123843731 DQ893139 DQ896423 BC009842 AB209758 AK291871 AF019633 NM_007083	-180493	-	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	293702	+	AK026960 BC063856 NM_005841	296419	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	1609560	-	NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AF019632|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK294450|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_198041|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50	0.455499	CTCF.p2:-20:0.455
chr8	126130751	126130875	reg1006170.p1	10.831	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-26716	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-26756	-	TSC_hg19_v1_chr8_-_126104024 AK296970	-26791	-	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	311766	+	TSC_hg19_v1_chr8_-_126963395 BX648371	832600	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	1439742	-	NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##AK296970|KIAA0196|9897|KIAA0196##BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B	0.998691	CTCF.p2:-16:0.999
chr10	61963923	61964048	reg1009544.p2	10.830	+	AK292927 AK092527 NM_001149	-63269	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-297661	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	-297784	-	U13616 NM_020987	185575	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	368705	-	EU832293 EU832377 AK172736 BX537917 TSC_hg19_v1_chr10_-_62493273 BX648574	529192	-	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##S72869|CCDC6|8030|coiled-coil domain containing 6##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832293|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832377|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX537917|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX648574|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.036557	
chr1	46872128	46872203	reg1008163.p1	10.830	+	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	-12189	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-65722	+	TSC_hg19_v1_chr1_+_46769369 D28439 BC093060 BC001934 NM_006004 BC015177 BC107703 BC001426 AK311967 Y00764 M36647 BT007070	-102778	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	100507	+	NM_001097611	144721	-	BC002755 AB000409 AK096423 TSC_hg19_v1_chr1_-_47069922	197739	-	NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##D28439|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC093060|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001934|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006004|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC015177|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC107703|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001426|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##AK311967|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##Y00764|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##M36647|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BT007070|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001097611|KNCN|148930|kinocilin##BC002755|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AB000409|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK096423|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1	0.996724	CTCF.p2:26:0.997
chr17	15752503	15752628	reg1011290.p1	10.830	+	NM_178571 AK292544 AK315847 BC028414 BC047400	-116972	+	AK315062 BC015730 BC025260 AK092259 AB058777 TSC_hg19_v1_chr17_+_15603063	-149510	+	NM_001130842 NM_020652 AK296547 TSC_hg19_v1_chr17_+_15603030	-149602	+	NM_000676 X68487	95665	+	TSC_hg19_v1_chr17_+_15848443 M97759 BC025722 AB464451 DQ891714 DQ894891 CU693036 AY136748	95927	+	BC105128 BC112107 NM_017775 TSC_hg19_v1_chr17_+_15902780 AK056878	150200	+	NM_178571|TBC1D26|353149|TBC1 domain family, member 26##AK292544|TBC1D28|254272|TBC1 domain family, member 28##AK315847|TBC1D26|353149|TBC1 domain family, member 26##BC028414|TBC1D26|353149|TBC1 domain family, member 26##BC047400|TBC1D26|353149|TBC1 domain family, member 26##AK315062|ZNF286A|57335|zinc finger protein 286A##BC015730|ZNF286A|57335|zinc finger protein 286A##BC025260|ZNF286A|57335|zinc finger protein 286A##AK092259|ZNF286A|57335|zinc finger protein 286A##NM_001130842|ZNF286A|57335|zinc finger protein 286A##NM_020652|ZNF286A|57335|zinc finger protein 286A##NM_000676|ADORA2B|136|adenosine A2b receptor##X68487|ADORA2B|136|adenosine A2b receptor##M97759|ADORA2B|136|adenosine A2b receptor##BC025722|ADORA2B|136|adenosine A2b receptor##DQ891714|ADORA2B|136|adenosine A2b receptor##DQ894891|ADORA2B|136|adenosine A2b receptor##AY136748|ADORA2B|136|adenosine A2b receptor##BC105128|TTC19|54902|tetratricopeptide repeat domain 19##BC112107|TTC19|54902|tetratricopeptide repeat domain 19##NM_017775|TTC19|54902|tetratricopeptide repeat domain 19##AK056878|TTC19|54902|tetratricopeptide repeat domain 19	0.0	
chr5	157345072	157345185	reg1009505.p1	10.830	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-59038	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-160748	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-174388	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	1181329	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	1181614	-	AK304228 NM_001199382	1289520	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.616181	CTCF.p2:15:0.616
chr1	156579007	156579119	reg1008992.p2	10.829	+	AB528795 BC032436 TSC_hg19_v1_chr1_-_156571275 BC040147 AK125763 BC056904 AK000256 AK293026 AK301232 NM_015590 NM_182679	-7806	-	TSC_hg19_v1_chr1_+_156561594 AK316083	-17461	+	TSC_hg19_v1_chr1_+_156561567 AK294835 AK298222 BC056917 NM_144772 AJ315849 BC100931 BC100932 BC100933 BC100934	-17508	+	AB049054 NM_021817 AK294131 AK310758 AK308805 AK090712 AK308980 AK293797 BC029864	10123	+	TSC_hg19_v1_chr1_+_156611723 AY358372 NM_021948 NM_198427	32666	+	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	32891	+	BC032436|GPATCH4|54865|G patch domain containing 4##BC040147|GPATCH4|54865|G patch domain containing 4##AK125763|GPATCH4|54865|G patch domain containing 4##BC056904|GPATCH4|54865|G patch domain containing 4##AK000256|GPATCH4|54865|G patch domain containing 4##AK293026|GPATCH4|54865|G patch domain containing 4##AK301232|GPATCH4|54865|G patch domain containing 4##NM_015590|GPATCH4|54865|G patch domain containing 4##NM_182679|GPATCH4|54865|G patch domain containing 4##AK294835|APOA1BP|128240|apolipoprotein A-I binding protein##AK298222|APOA1BP|128240|apolipoprotein A-I binding protein##BC056917|APOA1BP|128240|apolipoprotein A-I binding protein##NM_144772|APOA1BP|128240|apolipoprotein A-I binding protein##AJ315849|APOA1BP|128240|apolipoprotein A-I binding protein##BC100931|APOA1BP|128240|apolipoprotein A-I binding protein##BC100932|APOA1BP|128240|apolipoprotein A-I binding protein##BC100933|APOA1BP|128240|apolipoprotein A-I binding protein##BC100934|APOA1BP|128240|apolipoprotein A-I binding protein##AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AY358372|BCAN|63827|brevican##NM_021948|BCAN|63827|brevican##NM_198427|BCAN|63827|brevican##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican	0.474787	CTCF.p2:2:0.475
chr9	115123903	115124042	reg1008734.p1	10.829	+	TSC_hg19_v1_chr9_-_115095957 NM_001163788 NM_001163790 NM_001244896 NM_001244897 NM_005156	-27999	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	-28123	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	-28685	-	NM_001195822 NM_032303 AK098721 TSC_hg19_v1_chr9_+_115142387 AY093428 BC004331 AK289929 AK292486 AK313605 AK225946 AK303645 AK301469	18318	+	TSC_hg19_v1_chr9_+_115142411 BC095451 CU678670	18446	+	TSC_hg19_v1_chr9_+_115249149 AK096613 NM_133465	125190	+	NM_001163788|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001163790|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244896|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244897|PTBP3|9991|polypyrimidine tract binding protein 3##NM_005156|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001195822|HSDL2|84263|hydroxysteroid dehydrogenase like 2##NM_032303|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK098721|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AY093428|HSDL2|84263|hydroxysteroid dehydrogenase like 2##BC004331|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK289929|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK292486|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK313605|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK225946|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK303645|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK301469|HSDL2|84263|hydroxysteroid dehydrogenase like 2##BC095451|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK096613|KIAA1958|158405|KIAA1958##NM_133465|KIAA1958|158405|KIAA1958	0.999731	CTCF.p2:4:1.000
chr11	33187900	33188009	reg1008848.p1	10.828	+	AB527773 CU679493 BC059948 TSC_hg19_v1_chr11_-_33183016 U15782 BC108319 BC009792 AK297371 AK290836 NM_001033505 NM_001033506 NM_001326	-4978	-	NM_001145541 AK002198	-126386	+	TSC_hg19_v1_chr11_+_33061291 BC030582	-126632	+	NM_001048200 NM_005734 TSC_hg19_v1_chr11_+_33279272 Y09306 AF305239	91331	+	TSC_hg19_v1_chr11_+_33279873 AK293009	91915	+	TSC_hg19_v1_chr11_+_33350077 AY425958	162156	+	BC059948|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##U15782|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##BC108319|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##BC009792|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##AK297371|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##AK290836|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##NM_001033505|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##NM_001033506|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##NM_001326|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##NM_001145541|TCP11L1|55346|t-complex 11 (mouse)-like 1##AK002198|TCP11L1|55346|t-complex 11 (mouse)-like 1##BC030582|TCP11L1|55346|t-complex 11 (mouse)-like 1##NM_001048200|HIPK3|10114|homeodomain interacting protein kinase 3##NM_005734|HIPK3|10114|homeodomain interacting protein kinase 3##Y09306|HIPK3|10114|homeodomain interacting protein kinase 3##AF305239|HIPK3|10114|homeodomain interacting protein kinase 3##AK293009|HIPK3|10114|homeodomain interacting protein kinase 3##AY425958|HIPK3|10114|homeodomain interacting protein kinase 3	0.179653	
chr12	69550927	69551074	reg1011489.p1	10.828	+	J04970 NM_001874 AK127859	-193981	-	TSC_hg19_v1_chr12_-_69326952 AF368463 AK313180 BC022276 NM_001005502 NM_198320	-224038	-	EU076746 EU076747 EU076748 EU076749 TSC_hg19_v1_chr12_+_69202803	-348199	+	NM_007007 TSC_hg19_v1_chr12_+_69633348 AK223568 AK299928	82333	+	TSC_hg19_v1_chr12_+_69633357 BC005000 BC000714 X67337 AK292024 CU674352 CU678850 DQ892159 EU176688	82389	+	TSC_hg19_v1_chr12_+_69742133 AK130149 NM_000239	191131	+	J04970|CPM|1368|carboxypeptidase M##NM_001874|CPM|1368|carboxypeptidase M##AK127859|CPM|1368|carboxypeptidase M##AF368463|CPM|1368|carboxypeptidase M##AK313180|CPM|1368|carboxypeptidase M##BC022276|CPM|1368|carboxypeptidase M##NM_001005502|CPM|1368|carboxypeptidase M##NM_198320|CPM|1368|carboxypeptidase M##EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK130149|LYZ|4069|lysozyme##NM_000239|LYZ|4069|lysozyme	1.011892	CTCF.p2:11:0.998
chr19	45287764	45287897	reg1009111.p1	10.828	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	-6674	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	-35849	+	BC144608 NM_001039213	-85410	+	TSC_hg19_v1_chr19_+_45312359 BC014065 NM_001013257 NM_005581 X83425 BC036745 X80026 BC050450 AB463427 CU690688 HE572749	24526	+	NM_001042724 NM_002856 TSC_hg19_v1_chr19_+_45349482	61612	+	TSC_hg19_v1_chr19_+_45349564 AK291330	61733	+	AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_001042724|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##NM_002856|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##AK291330|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)	0.996102	CTCF.p2:-21:0.996
chr15	59539691	59539834	reg1011311.p1	10.827	+	AY642121 BC022034 AY009108 NM_033195 AK312777 AK058192	-40710	+	TSC_hg19_v1_chr15_+_59397344 NM_004701 AK001404 AL080146 BC105086 BC105112 AF087910 AK222611 AB020981 AF002822 AB587333 AM393577 BT019458 CR533527	-142391	+	TSC_hg19_v1_chr15_+_59359061 AK095327	-180684	+	AB290177 TSC_hg19_v1_chr15_-_59665055	125292	-	TSC_hg19_v1_chr15_-_59665065 AK291688	125304	-	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	125308	-	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B##BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_004701|CCNB2|9133|cyclin B2##AK001404|CCNB2|9133|cyclin B2##AL080146|CCNB2|9133|cyclin B2##BC105086|CCNB2|9133|cyclin B2##BC105112|CCNB2|9133|cyclin B2##AF087910|CCNB2|9133|cyclin B2##AK222611|CCNB2|9133|cyclin B2##AB020981|CCNB2|9133|cyclin B2##AF002822|CCNB2|9133|cyclin B2##AM393577|CCNB2|9133|cyclin B2##BT019458|CCNB2|9133|cyclin B2##CR533527|CCNB2|9133|cyclin B2##AK095327|RNF111|54778|ring finger protein 111##AB290177|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE	0.993987	CTCF.p2:1:0.994
chr19	2819674	2819827	reg1008604.p1	10.827	+	TSC_hg19_v1_chr19_+_2785534 BC002391 NM_003249 BC000135 BC013878 Z50115 U29366 EU176234 CU677940 CU680690	-34189	+	TSC_hg19_v1_chr19_-_2783332 NM_003021	-36408	-	AK293535 TSC_hg19_v1_chr19_-_2783326	-36423	-	TSC_hg19_v1_chr19_+_2819873 NM_001102651 AK299752 BC047777 AK092136 AX747373	123	+	TSC_hg19_v1_chr19_+_2819942 BC000113 CU690506	255	+	NM_001172775 NM_152791 AK093163 AX747966 AL832140 BX647423 BC022022 AK292954	21708	+	BC002391|THOP1|7064|thimet oligopeptidase 1##NM_003249|THOP1|7064|thimet oligopeptidase 1##BC000135|THOP1|7064|thimet oligopeptidase 1##BC013878|THOP1|7064|thimet oligopeptidase 1##Z50115|THOP1|7064|thimet oligopeptidase 1##U29366|THOP1|7064|thimet oligopeptidase 1##EU176234|THOP1|7064|thimet oligopeptidase 1##NM_003021|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##AK293535|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##NM_001102651|ZNF554|115196|zinc finger protein 554##AK299752|ZNF554|115196|zinc finger protein 554##BC047777|ZNF554|115196|zinc finger protein 554##AK092136|ZNF554|115196|zinc finger protein 554##BC000113|ZNF554|115196|zinc finger protein 554##NM_001172775|ZNF555|148254|zinc finger protein 555##NM_152791|ZNF555|148254|zinc finger protein 555##AK093163|ZNF555|148254|zinc finger protein 555##AL832140|ZNF555|148254|zinc finger protein 555##BX647423|ZNF555|148254|zinc finger protein 555##BC022022|ZNF555|148254|zinc finger protein 555##AK292954|ZNF555|148254|zinc finger protein 555	0.0	
chr19	56861946	56862066	reg1010328.p1	10.827	+	BC002636 NM_024303 AK098700	-122338	-	NM_001080456	-157586	-	AF188492 AF188493 NM_001145546 NM_033106	-174618	+	BX647919 AK097128 TSC_hg19_v1_chr19_+_56879704 AL833621 BC064603 BC089419	17710	+	TSC_hg19_v1_chr19_-_56904904 AK055489 NM_144690 AK299036 BC056238 AK316028	42886	-	NM_001159860	53376	+	BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_001080456|ZSCAN5B|342933|zinc finger and SCAN domain containing 5B##AF188492|GALP|85569|galanin-like peptide##AF188493|GALP|85569|galanin-like peptide##NM_001145546|GALP|85569|galanin-like peptide##NM_033106|GALP|85569|galanin-like peptide##BX647919|ZNF542|147947|zinc finger protein 542##AK097128|ZNF542|147947|zinc finger protein 542##AL833621|ZNF542|147947|zinc finger protein 542##BC064603|ZNF542|147947|zinc finger protein 542##BC089419|ZNF542|147947|zinc finger protein 542##AK055489|ZNF582|147948|zinc finger protein 582##NM_144690|ZNF582|147948|zinc finger protein 582##AK299036|ZNF582|147948|zinc finger protein 582##BC056238|ZNF582|147948|zinc finger protein 582##AK316028|ZNF582|147948|zinc finger protein 582##NM_001159860|ZNF583|147949|zinc finger protein 583	0.870452	CTCF.p2:10:0.870
chr7	82110946	82111084	reg1012298.p1	10.827	+	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	-37935	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	-38169	-	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-711641	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	680854	-	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	681221	-	AK303925 NM_001178129	1159731	-	NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	0.767417	CTCF.p2:-7:0.767
chr21	34569266	34569413	reg1011863.p1	10.825	+	TSC_hg19_v1_chr21_+_34444006 BC011252	-125294	+	TSC_hg19_v1_chr21_+_34442554 AB463154 DQ896828 BC026989	-126778	+	TSC_hg19_v1_chr21_+_34442446 BC033290 NM_138983 AL834450 AB209791	-126887	+	BC002793 NM_000874 NM_207584 NM_207585 TSC_hg19_v1_chr21_+_34602236	32881	+	TSC_hg19_v1_chr21_+_34602281 L41942 L41944	32940	+	TSC_hg19_v1_chr21_+_34602305 BC013156 X77722 X89814 U29584	33063	+	BC011252|OLIG1|116448|oligodendrocyte transcription factor 1##DQ896828|OLIG1|116448|oligodendrocyte transcription factor 1##BC026989|OLIG1|116448|oligodendrocyte transcription factor 1##BC033290|OLIG1|116448|oligodendrocyte transcription factor 1##NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1##AL834450|OLIG1|116448|oligodendrocyte transcription factor 1##AB209791|OLIG1|116448|oligodendrocyte transcription factor 1##BC002793|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_000874|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207585|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41942|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41944|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##BC013156|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X77722|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X89814|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##U29584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2	0.988475	CTCF.p2:20:0.988
chr3	192534204	192534333	reg1008457.p1	10.825	+	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	-88903	-	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-407425	-	AY858112 NM_001083308	-1355317	+	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	101368	-	BC036194 BC045582 NM_178496	101673	-	TSC_hg19_v1_chr3_+_192958897 BC048095 NM_020386	424636	+	AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2##BC048095|HRASLS|57110|HRAS-like suppressor##NM_020386|HRASLS|57110|HRAS-like suppressor	0.137419	
chr5	71433751	71433887	reg1011541.p1	10.825	+	TSC_hg19_v1_chr5_+_71403301 BC017240 NM_005909 BC025240 BC139918 BC150196 BC046114 AK096273 AK308147 BX647077 BC039822 BC108733 BC032516 BC073993 BC056145 BC063669 BC094834 AB463119	-30540	+	NM_004291 BC029882 U16826 CR542216 CU688778 EU831800 EU831877	-418765	+	TSC_hg19_v1_chr5_+_70944968 AK025591	-488832	+	TSC_hg19_v1_chr5_+_71502701 AK125194	68944	+	CU687962 D87453 TSC_hg19_v1_chr5_-_71616067 BC064902 BC011818 AK299412 AK025417 AK309065	182239	-	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	182261	-	BC017240|MAP1B|4131|microtubule-associated protein 1B##NM_005909|MAP1B|4131|microtubule-associated protein 1B##BC025240|MAP1B|4131|microtubule-associated protein 1B##BC139918|MAP1B|4131|microtubule-associated protein 1B##BC150196|MAP1B|4131|microtubule-associated protein 1B##BC046114|MAP1B|4131|microtubule-associated protein 1B##AK096273|MAP1B|4131|microtubule-associated protein 1B##AK308147|MAP1B|4131|microtubule-associated protein 1B##BX647077|MAP1B|4131|microtubule-associated protein 1B##BC039822|MAP1B|4131|microtubule-associated protein 1B##BC108733|MAP1B|4131|microtubule-associated protein 1B##BC032516|MAP1B|4131|microtubule-associated protein 1B##BC073993|MAP1B|4131|microtubule-associated protein 1B##BC056145|MAP1B|4131|microtubule-associated protein 1B##BC063669|MAP1B|4131|microtubule-associated protein 1B##BC094834|MAP1B|4131|microtubule-associated protein 1B##NM_004291|CARTPT|9607|CART prepropeptide##BC029882|CARTPT|9607|CART prepropeptide##U16826|CARTPT|9607|CART prepropeptide##CR542216|CARTPT|9607|CART prepropeptide##EU831800|CARTPT|9607|CART prepropeptide##EU831877|CARTPT|9607|CART prepropeptide##AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AK125194|MAP1B|4131|microtubule-associated protein 1B##D87453|MRPS27|23107|mitochondrial ribosomal protein S27##BC064902|MRPS27|23107|mitochondrial ribosomal protein S27##BC011818|MRPS27|23107|mitochondrial ribosomal protein S27##AK299412|MRPS27|23107|mitochondrial ribosomal protein S27##AK025417|MRPS27|23107|mitochondrial ribosomal protein S27##AK309065|MRPS27|23107|mitochondrial ribosomal protein S27##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27	0.981824	CTCF.p2:-1:0.982
chr6	12292713	12292848	reg1010830.p1	10.825	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	-2187	+	NM_002114	-280057	+	NM_001143948 NM_032744	-513501	-	TSC_hg19_v1_chr6_+_12514301 D28417	221522	+	AK295263 TSC_hg19_v1_chr6_+_12716998	424163	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	424263	+	NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1	0.112162	
chr7	22041129	22041247	reg1009392.p1	10.825	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-55706	-	AJ320497 NM_003777	-458356	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-572864	+	AL833195 NM_012294	355333	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	498659	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	725635	+	AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)	0.935898	CTCF.p2:27:0.936
chr7	27200678	27200804	reg1009007.p2	10.825	+	AB463748 TSC_hg19_v1_chr7_-_27196299 AJ005814 BC061916 AF026397 NM_006896	-4496	-	TSC_hg19_v1_chr7_-_27192203 DQ655986	-8533	-	AB587586 BC069497 CU686852 BC104915 BC104917 NM_024014	-13362	-	AB463749 AM393527 BT006990 DQ892748 DQ895994 TSC_hg19_v1_chr7_-_27205095 U82759	4345	-	TSC_hg19_v1_chr7_-_27205124 BC006537 BC010023	4385	-	NM_152739 TSC_hg19_v1_chr7_-_27205157	4413	-	BC061916|HOXA7|3204|homeobox A7##AF026397|HOXA7|3204|homeobox A7##NM_006896|HOXA7|3204|homeobox A7##BC069497|HOXA6|3203|homeobox A6##BC104915|HOXA6|3203|homeobox A6##BC104917|HOXA6|3203|homeobox A6##NM_024014|HOXA6|3203|homeobox A6##AM393527|HOXA9|3205|homeobox A9##BT006990|HOXA9|3205|homeobox A9##DQ892748|HOXA9|3205|homeobox A9##DQ895994|HOXA9|3205|homeobox A9##U82759|HOXA9|3205|homeobox A9##BC006537|HOXA9|3205|homeobox A9##BC010023|HOXA9|3205|homeobox A9##NM_152739|HOXA9|3205|homeobox A9	0.999803	CTCF.p2:21:1.000
chr17	46955651	46955765	reg1000412.p1	10.824	+	NM_005831 AK293329 TSC_hg19_v1_chr17_+_46908406 AK293137 AK303313 AK304024 AK310648 AK314796 U22897 AK222666 AK223227 AK298177 BC004130	-47318	+	AK097392 AK302952 BC041368 AL834151 NM_001130918	-61284	-	CU689652 BC033563 NM_173623 AK310321	-84063	-	AK095669 TSC_hg19_v1_chr17_+_46970178 NM_001002027 NM_005175 AL080089 AK311848 D13118	14477	+	TSC_hg19_v1_chr17_+_46985768 NM_023079 AK296865	30037	+	AK130303 TSC_hg19_v1_chr17_+_46985840 AK024030 AK122770	30126	+	NM_005831|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293329|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293137|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK303313|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK304024|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK314796|CALCOCO2|10241|calcium binding and coiled-coil domain 2##U22897|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK222666|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK223227|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK298177|CALCOCO2|10241|calcium binding and coiled-coil domain 2##BC004130|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK097392|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK302952|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC041368|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AL834151|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_001130918|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC033563|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_173623|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK310321|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK095669|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_001002027|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_005175|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AL080089|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AK311848|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##D13118|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_023079|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK296865|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK130303|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK024030|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK122770|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z	0.801193	CTCF.p2:0:0.768
chr3	153486778	153486889	reg1008387.p1	10.823	+	AF086445 NM_001101337	-284550	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-606785	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-606807	+	AK127282 NM_001251962	351958	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	352369	+	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	555427	-	AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36	0.75662	CTCF.p2:20:0.757
chr17	64724177	64724305	reg1011978.p1	10.822	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	-425314	+	TSC_hg19_v1_chr17_+_64298733 BC053321	-425491	+	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	-498716	-	AK290171 TSC_hg19_v1_chr17_+_64831234	106994	+	BC101633 NM_145811 BC101607 AF361351 AF458898	149179	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	236648	+	NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##BC053321|PRKCA|5578|protein kinase C, alpha##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	0.993189	CTCF.p2:0:0.993
chr3	134319803	134319927	reg1009907.p1	10.821	+	AK023448 BC068997 TSC_hg19_v1_chr3_+_134205041 NM_025180 AK056465	-114841	+	TSC_hg19_v1_chr3_+_134204899 NM_001042400	-114981	+	BX537696 TSC_hg19_v1_chr3_-_134204864 NM_015391 AK001285 NM_001242374	-114997	-	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	49980	-	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	194286	+	TSC_hg19_v1_chr3_+_134514301 BC111744	194436	+	AK023448|CEP63|80254|centrosomal protein 63kDa##BC068997|CEP63|80254|centrosomal protein 63kDa##NM_025180|CEP63|80254|centrosomal protein 63kDa##AK056465|CEP63|80254|centrosomal protein 63kDa##NM_001042400|CEP63|80254|centrosomal protein 63kDa##BX537696|ANAPC13|25847|anaphase promoting complex subunit 13##NM_015391|ANAPC13|25847|anaphase promoting complex subunit 13##AK001285|ANAPC13|25847|anaphase promoting complex subunit 13##NM_001242374|ANAPC13|25847|anaphase promoting complex subunit 13##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC111744|EPHB1|2047|EPH receptor B1	0.878127	CTCF.p2:-2:0.878
chr12	109956687	109956819	reg1010230.p1	10.818	+	TSC_hg19_v1_chr12_+_109915463 BC141880	-41248	+	TSC_hg19_v1_chr12_+_109915446 BC032301 BC108705 BC144684 BC150637 BC051266 AF251046 AL096740 BC068221	-41302	+	TSC_hg19_v1_chr12_+_109915438 BX537403 NM_130466 NM_183415 AK307385	-41317	+	AK301036 TSC_hg19_v1_chr12_+_109967767 AK304678	11008	+	TSC_hg19_v1_chr12_+_109972962 BC013182	16218	+	TSC_hg19_v1_chr12_-_110011310 BC005054 BC011831 AK295211 AK312598 NM_052845	54568	-	BC141880|UBE3B|89910|ubiquitin protein ligase E3B##BC032301|UBE3B|89910|ubiquitin protein ligase E3B##BC108705|UBE3B|89910|ubiquitin protein ligase E3B##BC144684|UBE3B|89910|ubiquitin protein ligase E3B##BC150637|UBE3B|89910|ubiquitin protein ligase E3B##BC051266|UBE3B|89910|ubiquitin protein ligase E3B##AF251046|UBE3B|89910|ubiquitin protein ligase E3B##AL096740|UBE3B|89910|ubiquitin protein ligase E3B##BC068221|UBE3B|89910|ubiquitin protein ligase E3B##BX537403|UBE3B|89910|ubiquitin protein ligase E3B##NM_130466|UBE3B|89910|ubiquitin protein ligase E3B##NM_183415|UBE3B|89910|ubiquitin protein ligase E3B##AK307385|UBE3B|89910|ubiquitin protein ligase E3B##AK304678|UBE3B|89910|ubiquitin protein ligase E3B##BC013182|UBE3B|89910|ubiquitin protein ligase E3B##BC005054|MMAB|326625|methylmalonic aciduria (cobalamin deficiency) cblB type##BC011831|MMAB|326625|methylmalonic aciduria (cobalamin deficiency) cblB type##AK295211|MMAB|326625|methylmalonic aciduria (cobalamin deficiency) cblB type##AK312598|MMAB|326625|methylmalonic aciduria (cobalamin deficiency) cblB type##NM_052845|MMAB|326625|methylmalonic aciduria (cobalamin deficiency) cblB type	0.945108	CTCF.p2:-5:0.945
chr5	14399286	14399422	reg1011450.p1	10.818	+	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	-255682	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-387484	-	AX800026 AY045575 NM_001369	-454766	-	TSC_hg19_v1_chr5_+_14488527 AK131423	89185	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	182546	+	TSC_hg19_v1_chr5_+_14581949 AK001989 BC011524 CU679940	182610	+	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A##AK001989|FAM105A|54491|family with sequence similarity 105, member A##BC011524|FAM105A|54491|family with sequence similarity 105, member A	0.960081	CTCF.p2:7:0.960
chr11	10675937	10676057	reg1008915.p2	10.817	+	AK300358 NM_001098579 AF081249	-2120	-	CU693164 DQ892040 DQ895232 AK300885 BC026231 AF118108 AF127670 TSC_hg19_v1_chr11_-_10590213 AY358925 AK075443 AK312462 NM_006691	-85776	-	BC028123 TSC_hg19_v1_chr11_+_10562846	-113165	+	TSC_hg19_v1_chr11_-_10715063 AK301296 AK127209 NM_001100167 BC117127	39083	-	AF081250 TSC_hg19_v1_chr11_-_10715170 AK304702	39170	-	TSC_hg19_v1_chr11_-_10715300 AK296336	39312	-	AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog##AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog##DQ892040|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##DQ895232|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK300885|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##BC026231|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AF118108|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AF127670|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AY358925|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK075443|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK312462|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##NM_006691|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##BC028123|MRVI1-AS1|100129827|MRVI1 antisense RNA 1 (non-protein coding)##AK301296|MRVI1|10335|murine retrovirus integration site 1 homolog##AK127209|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001100167|MRVI1|10335|murine retrovirus integration site 1 homolog##BC117127|MRVI1|10335|murine retrovirus integration site 1 homolog##AF081250|MRVI1|10335|murine retrovirus integration site 1 homolog##AK304702|MRVI1|10335|murine retrovirus integration site 1 homolog##AK296336|MRVI1|10335|murine retrovirus integration site 1 homolog	0.981832	CTCF.p2:21:0.982
chr1	227730373	227730486	reg1008638.p1	10.817	+	TSC_hg19_v1_chr1_-_227506194 NM_003607 NM_014826 U59305	-224379	-	TSC_hg19_v1_chr1_+_227128004 AB073905	-602405	+	TSC_hg19_v1_chr1_+_227127998 AK074693 AK092784 AK126200 AK293571 AK297735 AX747728 AK090494 AK301012 AX746479	-602434	+	TSC_hg19_v1_chr1_+_227751254 NM_178549 AK026475 AK307248 BC042500	20809	+	AK311313 TSC_hg19_v1_chr1_+_227751265	20852	+	AK055266 AK093736 BC032775 TSC_hg19_v1_chr1_+_227916386	185888	+	NM_003607|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##NM_014826|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##U59305|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##AB073905|ADCK3|56997|aarF domain containing kinase 3##AK074693|ADCK3|56997|aarF domain containing kinase 3##AK092784|ADCK3|56997|aarF domain containing kinase 3##AK126200|ADCK3|56997|aarF domain containing kinase 3##AK293571|ADCK3|56997|aarF domain containing kinase 3##AK297735|ADCK3|56997|aarF domain containing kinase 3##AK090494|ADCK3|56997|aarF domain containing kinase 3##AK301012|ADCK3|56997|aarF domain containing kinase 3##NM_178549|ZNF678|339500|zinc finger protein 678##AK026475|ZNF678|339500|zinc finger protein 678##AK307248|ZNF678|339500|zinc finger protein 678##BC042500|ZNF678|339500|zinc finger protein 678##AK311313|ZNF678|339500|zinc finger protein 678##AK055266|LOC100130093|100130093|uncharacterized LOC100130093##AK093736|LOC100130093|100130093|uncharacterized LOC100130093	0.998459	CTCF.p2:-14:0.998
chr17	53434197	53434341	reg1011627.p1	10.817	+	TSC_hg19_v1_chr17_+_53344967 AK295726 AK074289	-89283	+	AK290043 TSC_hg19_v1_chr17_+_53343204	-91082	+	TSC_hg19_v1_chr17_+_53342370 BC036093 M95585	-91828	+	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	64986	-	BC010128 AK001832 NM_018286	365880	-	AK095175 NM_001099640	375193	-	AK295726|HLF|3131|hepatic leukemia factor##AK074289|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor##BC036093|HLF|3131|hepatic leukemia factor##M95585|HLF|3131|hepatic leukemia factor##CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100	0.999791	CTCF.p2:7:1.000
chr10	15033496	15033613	reg1005654.p1	10.816	+	NM_001080836	-32117	+	CU692508 TSC_hg19_v1_chr10_-_14996096 BC108276 AK022922 BC022254 AF395747 AF395748 AF395749 AF395750 AF395751 AF395752 AJ296101 BC009185 BX648858 AK021422 AK290598 AK307912 NM_001033855 NM_001033857 NM_001033858 NM_022487	-37500	-	NM_001193424 NM_001193426 BC029360 TSC_hg19_v1_chr10_+_14920864 NM_001193425 NM_001193427 AK222565 AK225369 AK027067 CU688630 BC007754 NM_024670	-112715	+	NM_001039702 NM_018324 BC050372 AK001844 AK001968	52373	+	BC029526 AK095538 AK295169 NM_001039844 TSC_hg19_v1_chr10_-_15130776	97220	-	NM_001097590 NM_006414 NM_183005 TSC_hg19_v1_chr10_+_15139195 AK223418	105638	+	NM_001080836|MEIG1|644890|meiosis expressed gene 1 homolog (mouse)##BC108276|DCLRE1C|64421|DNA cross-link repair 1C##AK022922|DCLRE1C|64421|DNA cross-link repair 1C##BC022254|DCLRE1C|64421|DNA cross-link repair 1C##AF395747|DCLRE1C|64421|DNA cross-link repair 1C##AF395748|DCLRE1C|64421|DNA cross-link repair 1C##AF395749|DCLRE1C|64421|DNA cross-link repair 1C##AF395750|DCLRE1C|64421|DNA cross-link repair 1C##AF395751|DCLRE1C|64421|DNA cross-link repair 1C##AF395752|DCLRE1C|64421|DNA cross-link repair 1C##AJ296101|DCLRE1C|64421|DNA cross-link repair 1C##BC009185|DCLRE1C|64421|DNA cross-link repair 1C##BX648858|DCLRE1C|64421|DNA cross-link repair 1C##AK021422|DCLRE1C|64421|DNA cross-link repair 1C##AK290598|DCLRE1C|64421|DNA cross-link repair 1C##AK307912|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033855|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033857|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033858|DCLRE1C|64421|DNA cross-link repair 1C##NM_022487|DCLRE1C|64421|DNA cross-link repair 1C##NM_001193424|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193426|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##BC029360|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193425|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193427|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK222565|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK225369|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK027067|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##BC007754|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_024670|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001039702|OLAH|55301|oleoyl-ACP hydrolase##NM_018324|OLAH|55301|oleoyl-ACP hydrolase##BC050372|OLAH|55301|oleoyl-ACP hydrolase##AK001844|OLAH|55301|oleoyl-ACP hydrolase##AK001968|OLAH|55301|oleoyl-ACP hydrolase##BC029526|ACBD7|414149|acyl-CoA binding domain containing 7##AK095538|ACBD7|414149|acyl-CoA binding domain containing 7##AK295169|ACBD7|414149|acyl-CoA binding domain containing 7##NM_001039844|ACBD7|414149|acyl-CoA binding domain containing 7##NM_001097590|RPP38|10557|ribonuclease P/MRP 38kDa subunit##NM_006414|RPP38|10557|ribonuclease P/MRP 38kDa subunit##NM_183005|RPP38|10557|ribonuclease P/MRP 38kDa subunit##AK223418|RPP38|10557|ribonuclease P/MRP 38kDa subunit	1.632083	CTCF.p2:49:0.740	CTCF.p2:-53:0.892
chr12	33072199	33072307	reg1009004.p1	10.816	+	EU520483 EU520484 EU520485 EU520486 AB590796 HQ258660 TSC_hg19_v1_chr12_-_33049733 X97675 BC094762 BC126199 BC143966 BC143967 BC070083 NM_001005242 NM_004572	-22518	-	AF132939 CU677373 DQ893063 DQ896315 BC015625 TSC_hg19_v1_chr12_-_32908835 AK024057 AK026619 AK130935 NM_001040436	-163412	-	TSC_hg19_v1_chr12_+_32832277 AF061795 AF151685 AB384831 CU692924 DQ891544 DQ894732 BC000136	-239930	+	BC101024 BC101025 TSC_hg19_v1_chr12_-_33592705 AY198413 NM_198992	520413	-	AJ312278 NM_032834	1102962	+	TSC_hg19_v1_chr12_+_34175402 BC022336	1103133	+	EU520483|PKP2|5318|plakophilin 2##EU520484|PKP2|5318|plakophilin 2##EU520485|PKP2|5318|plakophilin 2##EU520486|PKP2|5318|plakophilin 2##HQ258660|PKP2|5318|plakophilin 2##X97675|PKP2|5318|plakophilin 2##BC094762|PKP2|5318|plakophilin 2##BC126199|PKP2|5318|plakophilin 2##BC143966|PKP2|5318|plakophilin 2##BC143967|PKP2|5318|plakophilin 2##BC070083|PKP2|5318|plakophilin 2##NM_001005242|PKP2|5318|plakophilin 2##NM_004572|PKP2|5318|plakophilin 2##AF132939|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##DQ893063|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##DQ896315|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##BC015625|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK024057|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK026619|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK130935|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##NM_001040436|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AF061795|DNM1L|10059|dynamin 1-like##AF151685|DNM1L|10059|dynamin 1-like##DQ891544|DNM1L|10059|dynamin 1-like##DQ894732|DNM1L|10059|dynamin 1-like##BC101024|SYT10|341359|synaptotagmin X##BC101025|SYT10|341359|synaptotagmin X##AY198413|SYT10|341359|synaptotagmin X##NM_198992|SYT10|341359|synaptotagmin X##AJ312278|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_032834|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC022336|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)	0.255056	CTCF.p2:2:0.255
chr1	54587354	54587467	reg1010337.p1	10.816	+	AK096488 AK056674 NM_153035 BC035374	-68111	+	AK075187 TSC_hg19_v1_chr1_-_54519086 AK074636 AF290615 AX775907 NM_004872	-68323	-	TSC_hg19_v1_chr1_-_54518929 AY359029	-68488	-	NM_201546	32032	-	TSC_hg19_v1_chr1_-_54665704 BC012781 BC038388 AK090456 BC071735 BC064419 AK122760 NM_001031672	78297	-	AK024572 NM_016491 TSC_hg19_v1_chr1_+_54665839	78432	+	AK096488|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##AK056674|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##NM_153035|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##BC035374|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##AK075187|TMEM59|9528|transmembrane protein 59##AF290615|TMEM59|9528|transmembrane protein 59##AX775907|TMEM59|9528|transmembrane protein 59##NM_004872|TMEM59|9528|transmembrane protein 59##AY359029|TMEM59|9528|transmembrane protein 59##NM_201546|CDCP2|200008|CUB domain containing protein 2##BC012781|CYB5RL|606495|cytochrome b5 reductase-like##BC038388|CYB5RL|606495|cytochrome b5 reductase-like##AK090456|CYB5RL|606495|cytochrome b5 reductase-like##BC071735|CYB5RL|606495|cytochrome b5 reductase-like##BC064419|CYB5RL|606495|cytochrome b5 reductase-like##NM_001031672|CYB5RL|606495|cytochrome b5 reductase-like##AK024572|MRPL37|51253|mitochondrial ribosomal protein L37##NM_016491|MRPL37|51253|mitochondrial ribosomal protein L37	0.976954	CTCF.p2:0:0.977
chr16	81069256	81069357	reg1006107.p1	10.816	+	TSC_hg19_v1_chr16_+_81040849 AK298554	-28428	+	TSC_hg19_v1_chr16_+_81040818 BC008972 AK296024 AK026313	-28488	+	TSC_hg19_v1_chr16_+_81040541 AF217515	-28765	+	TSC_hg19_v1_chr16_+_81069446 AX775771 NM_015251 BC002701 AK290943	207	+	AK057264 AK295411 BC064143 NM_001100873 NM_152337	41531	-	BT009827 CR457072 AK311978 M69175 BC000790 BC009065 BC020922 TSC_hg19_v1_chr16_-_81130001 D00723 NM_004483	60647	-	AK298554|CENPN|55839|centromere protein N##BC008972|CENPN|55839|centromere protein N##AK296024|CENPN|55839|centromere protein N##AK026313|CENPN|55839|centromere protein N##AF217515|CENPN|55839|centromere protein N##NM_015251|ATMIN|23300|ATM interactor##BC002701|ATMIN|23300|ATM interactor##AK290943|ATMIN|23300|ATM interactor##AK057264|C16orf46|123775|chromosome 16 open reading frame 46##AK295411|C16orf46|123775|chromosome 16 open reading frame 46##BC064143|C16orf46|123775|chromosome 16 open reading frame 46##NM_001100873|C16orf46|123775|chromosome 16 open reading frame 46##NM_152337|C16orf46|123775|chromosome 16 open reading frame 46##BT009827|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##CR457072|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##AK311978|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##M69175|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##BC000790|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##BC009065|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##BC020922|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##D00723|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##NM_004483|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)	1.684412	CTCF.p2:47:0.998	CTCF.p2:106:0.626
chr18	72219317	72219425	reg1008793.p1	10.816	+	AK314572 AK098369 AK289916 TSC_hg19_v1_chr18_+_72201836 AK303708 BC110295 AJ417564 BC113512 BC117122 HQ258259	-17521	+	AK308716 TSC_hg19_v1_chr18_+_72201683 NM_032649 AY358756	-17686	+	TSC_hg19_v1_chr18_+_72167152 AF258592 BC003176 AJ347717 CU678422	-52255	+	TSC_hg19_v1_chr18_-_72264818 AK001853 BC132930 BC132956	45470	-	TSC_hg19_v1_chr18_-_72265072 BC036588	45689	-	TSC_hg19_v1_chr18_+_72265126 AK056288	45760	+	AK314572|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)##AK098369|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)##AK289916|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)##AK303708|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)##BC110295|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)##AJ417564|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)##BC113512|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)##BC117122|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)##HQ258259|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)##AK308716|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)##NM_032649|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)##AY358756|CNDP1|84735|carnosine dipeptidase 1 (metallopeptidase M20 family)##AF258592|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##BC003176|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AJ347717|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK001853|LOC400657|400657|uncharacterized LOC400657##BC132930|LOC400657|400657|uncharacterized LOC400657##BC132956|LOC400657|400657|uncharacterized LOC400657##BC036588|LOC400657|400657|uncharacterized LOC400657##AK056288|ZNF407|55628|zinc finger protein 407	0.980612	CTCF.p2:11:0.981
chr13	43052779	43052928	reg1012368.p1	10.815	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	-206568	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	-340643	+	NM_152910 NM_178009 AB078967 AB078968	-429988	+	BC040889 NM_033012	84018	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	95481	+	NM_182508 AK310859 AK098238 BC093659 BC112237	302871	+	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30	0.357907	CTCF.p2:9:0.358
chr17	74454775	74454896	reg1009704.p1	10.815	+	BC092430 NM_001166579	-5403	+	TSC_hg19_v1_chr17_-_74449273 AB051521 NM_022066	-5547	-	BC007822 TSC_hg19_v1_chr17_-_74449235	-5592	-	NM_001088 U40347 AB593119 BC069434	8822	+	AK303434 AY500247 AK292166 NM_001005498	29063	-	TSC_hg19_v1_chr17_-_74497506 BC016034 AK292135 NM_024599	42624	-	BC092430|AANAT|15|aralkylamine N-acetyltransferase##NM_001166579|AANAT|15|aralkylamine N-acetyltransferase##AB051521|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_022066|UBE2O|63893|ubiquitin-conjugating enzyme E2O##BC007822|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_001088|AANAT|15|aralkylamine N-acetyltransferase##U40347|AANAT|15|aralkylamine N-acetyltransferase##AB593119|AANAT|15|aralkylamine N-acetyltransferase##BC069434|AANAT|15|aralkylamine N-acetyltransferase##AK303434|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AY500247|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292166|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001005498|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##BC016034|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292135|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_024599|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)	0.513363	CTCF.p2:-8:0.513
chr18	74061152	74061281	reg1008977.p1	10.815	+	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-921594	-	TSC_hg19_v1_chr18_+_72998258 AK223545 BC024152	-1062874	+	TSC_hg19_v1_chr18_+_72922751 NM_005786 AK091155 AX746813	-1138471	+	BC108287 TSC_hg19_v1_chr18_-_74092260	31034	-	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	145939	-	TSC_hg19_v1_chr18_-_74534239 BC032908	473023	-	BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1##BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1##NM_005786|TSHZ1|10194|teashirt zinc finger homeobox 1##BC108287|ZNF516|9658|zinc finger protein 516##D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC032908|LOC100131655|100131655|uncharacterized LOC100131655	0.991253	CTCF.p2:4:0.991
chr2	151908247	151908365	reg1011308.p1	10.815	+	X97758 BC012513 TSC_hg19_v1_chr2_-_151344182 AK298007 AK311312 NM_005168 AK313224	-564142	-	TSC_hg19_v1_chr2_-_150444290 NM_015702	-1463999	-	TSC_hg19_v1_chr2_-_150444250 BC023995 BC010894 AK310001 AF161510 BC022859 BC000932	-1464049	-	TSC_hg19_v1_chr2_-_152118378 BC136410 BC136411 AK127552 NM_198557	210027	-	TSC_hg19_v1_chr2_-_152146171 BC001268	237846	-	U32849 AK124323 TSC_hg19_v1_chr2_-_152146429 AK291548 AK298754 NM_004688	238097	-	X97758|RND3|390|Rho family GTPase 3##BC012513|RND3|390|Rho family GTPase 3##AK298007|RND3|390|Rho family GTPase 3##NM_005168|RND3|390|Rho family GTPase 3##AK313224|RND3|390|Rho family GTPase 3##NM_015702|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC023995|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC010894|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK310001|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF161510|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC022859|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC000932|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC136410|RBM43|375287|RNA binding motif protein 43##BC136411|RBM43|375287|RNA binding motif protein 43##AK127552|RBM43|375287|RNA binding motif protein 43##NM_198557|RBM43|375287|RNA binding motif protein 43##BC001268|NMI|9111|N-myc (and STAT) interactor##U32849|NMI|9111|N-myc (and STAT) interactor##AK124323|NMI|9111|N-myc (and STAT) interactor##AK291548|NMI|9111|N-myc (and STAT) interactor##AK298754|NMI|9111|N-myc (and STAT) interactor##NM_004688|NMI|9111|N-myc (and STAT) interactor	0.267248	CTCF.p2:10:0.267
chr2	174904744	174904889	reg1009470.p2	10.815	+	AY441957 NM_001172712 NM_003111	-74387	-	BC126414 BC143928 AK304199 TSC_hg19_v1_chr2_-_174830067	-74807	-	TSC_hg19_v1_chr2_-_174829232 AJ310752 AJ430844 AY441958 AB528284	-75622	-	BC068447 TSC_hg19_v1_chr2_-_175113235 BC013925 BC091522 DQ250006	208401	-	TSC_hg19_v1_chr2_-_175113245 AK296339 BC029376 AF134478	208429	-	TSC_hg19_v1_chr2_-_175113261 AK225112 AF078868	208454	-	AY441957|SP3|6670|Sp3 transcription factor##NM_001172712|SP3|6670|Sp3 transcription factor##NM_003111|SP3|6670|Sp3 transcription factor##BC126414|SP3|6670|Sp3 transcription factor##BC143928|SP3|6670|Sp3 transcription factor##AK304199|SP3|6670|Sp3 transcription factor##AJ310752|SP3|6670|Sp3 transcription factor##AY441958|SP3|6670|Sp3 transcription factor##BC068447|OLA1|29789|Obg-like ATPase 1##BC013925|OLA1|29789|Obg-like ATPase 1##BC091522|OLA1|29789|Obg-like ATPase 1##DQ250006|OLA1|29789|Obg-like ATPase 1##AK296339|OLA1|29789|Obg-like ATPase 1##BC029376|OLA1|29789|Obg-like ATPase 1##AF134478|OLA1|29789|Obg-like ATPase 1##AK225112|OLA1|29789|Obg-like ATPase 1##AF078868|OLA1|29789|Obg-like ATPase 1	0.993869	CTCF.p2:-3:0.994
chr10	88453650	88453793	reg1008359.p1	10.814	+	AK304760 TSC_hg19_v1_chr10_+_88428267 AK300692 AK297871 NM_001080116 AJ133766 BC010929 NM_001080114 NM_001080115 NM_001171611 NM_007078 AB014513 AF276807 AF276808 AF276809 AJ133767 AJ133768	-25366	+	TSC_hg19_v1_chr10_+_88428170 NM_001171610	-25535	+	TSC_hg19_v1_chr10_+_88426539 AK294696	-27176	+	TSC_hg19_v1_chr10_+_88516526 NM_004329 BC028383 AK291764 Z22535	62766	+	TSC_hg19_v1_chr10_-_88717330 BC072456 AK304727 AK023527 AK293822 BC094744 BC064415 AK308401 NM_024756	263650	-	NM_003087 AK223367 AK311652 BC014098 AK312141 AF017256 AF411524 EU019993 AF010126 DQ892334 DQ892505 DQ895719 EU176715 AB464279 CR541788 CR541790	264649	+	AK304760|LDB3|11155|LIM domain binding 3##AK300692|LDB3|11155|LIM domain binding 3##AK297871|LDB3|11155|LIM domain binding 3##NM_001080116|LDB3|11155|LIM domain binding 3##AJ133766|LDB3|11155|LIM domain binding 3##BC010929|LDB3|11155|LIM domain binding 3##NM_001080114|LDB3|11155|LIM domain binding 3##NM_001080115|LDB3|11155|LIM domain binding 3##NM_001171611|LDB3|11155|LIM domain binding 3##NM_007078|LDB3|11155|LIM domain binding 3##AB014513|LDB3|11155|LIM domain binding 3##AF276807|LDB3|11155|LIM domain binding 3##AF276808|LDB3|11155|LIM domain binding 3##AF276809|LDB3|11155|LIM domain binding 3##AJ133767|LDB3|11155|LIM domain binding 3##AJ133768|LDB3|11155|LIM domain binding 3##NM_001171610|LDB3|11155|LIM domain binding 3##AK294696|LDB3|11155|LIM domain binding 3##NM_004329|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC028383|BMPR1A|657|bone morphogenetic protein receptor, type IA##AK291764|BMPR1A|657|bone morphogenetic protein receptor, type IA##Z22535|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC072456|MMRN2|79812|multimerin 2##AK304727|MMRN2|79812|multimerin 2##AK023527|MMRN2|79812|multimerin 2##AK293822|MMRN2|79812|multimerin 2##BC094744|MMRN2|79812|multimerin 2##BC064415|MMRN2|79812|multimerin 2##AK308401|MMRN2|79812|multimerin 2##NM_024756|MMRN2|79812|multimerin 2##NM_003087|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK223367|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##BC014098|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK312141|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF017256|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF411524|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU019993|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF010126|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892334|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892505|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ895719|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU176715|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541788|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541790|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)	0.036678	
chr12	84220046	84220136	reg1007062.p1	10.814	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	-1138830	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	-1139174	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	-1139391	+	AK291207 AK022853 TSC_hg19_v1_chr12_-_85306547	1086452	-	TSC_hg19_v1_chr12_-_85306575 BC022253 BC070040	1086481	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	1086501	-	AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK291207|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK022853|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC022253|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC070040|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15	0.351255	CTCF.p2:-7:0.351
chr14	104603935	104604068	reg1012046.p1	10.814	+	AX781433 BX247999 NM_001080464 AX721044 BC035836 BC136637 AX781428 AX781429 AX781430 AX781431 AX781435	-51940	+	TSC_hg19_v1_chr14_+_104394792 NM_153046	-209218	+	AK310120 TSC_hg19_v1_chr14_-_104387867 AK309355 AK312099 AF054175 AK309499 DQ426862 NM_001127393 NM_004894	-216122	-	NM_015656	1058	+	TSC_hg19_v1_chr14_+_104605441 AB033062	1451	+	AK095913 NM_001008404 AK297818 AK309489 BC041103	442085	+	AX781433|ASPG|374569|asparaginase homolog (S. cerevisiae)##BX247999|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_001080464|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC035836|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC136637|ASPG|374569|asparaginase homolog (S. cerevisiae)##AX781435|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_153046|TDRD9|122402|tudor domain containing 9##AK310120|C14orf2|9556|chromosome 14 open reading frame 2##AK309355|C14orf2|9556|chromosome 14 open reading frame 2##AK312099|C14orf2|9556|chromosome 14 open reading frame 2##AF054175|C14orf2|9556|chromosome 14 open reading frame 2##AK309499|C14orf2|9556|chromosome 14 open reading frame 2##DQ426862|C14orf2|9556|chromosome 14 open reading frame 2##NM_001127393|C14orf2|9556|chromosome 14 open reading frame 2##NM_004894|C14orf2|9556|chromosome 14 open reading frame 2##NM_015656|KIF26A|26153|kinesin family member 26A##AB033062|KIF26A|26153|kinesin family member 26A##AK095913|C14orf180|400258|chromosome 14 open reading frame 180##NM_001008404|C14orf180|400258|chromosome 14 open reading frame 180##AK297818|C14orf180|400258|chromosome 14 open reading frame 180##AK309489|C14orf180|400258|chromosome 14 open reading frame 180##BC041103|C14orf180|400258|chromosome 14 open reading frame 180	0.997991	CTCF.p2:-4:0.998
chr7	27960921	27961056	reg1008900.p2	10.814	+	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-181169	+	BC001764 TSC_hg19_v1_chr7_+_27779809	-181179	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	-181213	+	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	259213	-	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	259418	-	L05913 NM_182899	377951	+	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5	0.962249	CTCF.p2:28:0.962
chr8	22452854	22452971	reg1011187.p1	10.814	+	AY007729 AY070438 NM_176871 NM_198042 TSC_hg19_v1_chr8_+_22437993 AY217349 AK024498 DQ893664 EU176702	-14862	+	TSC_hg19_v1_chr8_+_22436642 AK027800 BC071774 AF289563 BC021556	-16206	+	AK092968 AX747829 NM_021630	-16659	+	TSC_hg19_v1_chr8_+_22457113 AK295405 NM_001013842 NM_001198827 NM_173686	4208	+	TSC_hg19_v1_chr8_+_22462270 AK314535	9357	+	TSC_hg19_v1_chr8_+_22462275 BX640952	9364	+	AY007729|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AY070438|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_176871|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_198042|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AY217349|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK024498|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##DQ893664|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##EU176702|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK027800|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##BC071774|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AF289563|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##BC021556|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK092968|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_021630|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK295405|C8orf58|541565|chromosome 8 open reading frame 58##NM_001013842|C8orf58|541565|chromosome 8 open reading frame 58##NM_001198827|C8orf58|541565|chromosome 8 open reading frame 58##NM_173686|C8orf58|541565|chromosome 8 open reading frame 58##AK314535|KIAA1967|57805|KIAA1967##BX640952|KIAA1967|57805|KIAA1967	0.997514	CTCF.p2:-3:0.998
chr11	131996976	131997093	reg1009548.p1	10.813	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-215695	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-216410	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-756565	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	815980	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	816571	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	1405280	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.987771	CTCF.p2:11:0.988
chr1	9675774	9675896	reg1009090.p1	10.813	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-26879	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-76199	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	-76303	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	35969	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	208060	-	TSC_hg19_v1_chr1_-_9884023 AK304813	208186	-	BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1	0.071968	
chr5	159392702	159392820	reg1009376.p1	10.813	+	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	-48936	+	BC074723 M65272 NM_002187	-635287	-	TSC_hg19_v1_chr5_+_158690297 AY444562 AK057996 BC013425	-702475	+	TSC_hg19_v1_chr5_+_159436145 AK315262	43386	+	AK222641 TSC_hg19_v1_chr5_+_159436161 AK222984 NM_003314 U46570	43406	+	TSC_hg19_v1_chr5_-_159546405 AB067522 BC035076 BC105110 BC143437 NM_001130864 NM_052927	153698	-	NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC074723|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##M65272|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_002187|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##AY444562|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK057996|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##BC013425|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK315262|TTC1|7265|tetratricopeptide repeat domain 1##AK222641|TTC1|7265|tetratricopeptide repeat domain 1##AK222984|TTC1|7265|tetratricopeptide repeat domain 1##NM_003314|TTC1|7265|tetratricopeptide repeat domain 1##U46570|TTC1|7265|tetratricopeptide repeat domain 1##AB067522|PWWP2A|114825|PWWP domain containing 2A##BC035076|PWWP2A|114825|PWWP domain containing 2A##BC105110|PWWP2A|114825|PWWP domain containing 2A##BC143437|PWWP2A|114825|PWWP domain containing 2A##NM_001130864|PWWP2A|114825|PWWP domain containing 2A##NM_052927|PWWP2A|114825|PWWP domain containing 2A	0.021081	
chr6	34214403	34214546	reg1011991.p1	10.813	+	BC015789 NM_145905	-7907	+	TSC_hg19_v1_chr6_+_34205395 M23619	-9079	+	TSC_hg19_v1_chr6_+_34205029 AF176039	-9421	+	AK311680 TSC_hg19_v1_chr6_+_34216344	1876	+	BC047919 TSC_hg19_v1_chr6_-_34216784 BC023627 AK290164	2319	-	TSC_hg19_v1_chr6_-_34216832 BC009526 NM_001008703 NM_001008704 NM_178508	2389	-	BC015789|HMGA1|3159|high mobility group AT-hook 1##NM_145905|HMGA1|3159|high mobility group AT-hook 1##M23619|HMGA1|3159|high mobility group AT-hook 1##AF176039|HMGA1|3159|high mobility group AT-hook 1##BC047919|C6orf1|221491|chromosome 6 open reading frame 1##BC023627|C6orf1|221491|chromosome 6 open reading frame 1##AK290164|C6orf1|221491|chromosome 6 open reading frame 1##BC009526|C6orf1|221491|chromosome 6 open reading frame 1##NM_001008703|C6orf1|221491|chromosome 6 open reading frame 1##NM_001008704|C6orf1|221491|chromosome 6 open reading frame 1##NM_178508|C6orf1|221491|chromosome 6 open reading frame 1	0.971213	CTCF.p2:14:0.971
chr7	814264	814375	reg1008674.p1	10.813	+	BC026734 NM_001164758 NM_001164759	-47020	-	TSC_hg19_v1_chr7_-_766907 NM_001164760	-47393	-	TSC_hg19_v1_chr7_+_766769 AK056233	-47528	+	BC013613 NM_001171946	40874	+	NM_001171944 NM_001171945 NM_025154 TSC_hg19_v1_chr7_+_856279 AK022816 AK302896 AK309120 AK022469 BX538211 BC151827 AB018353 BC152418	41963	+	BC142707 NM_001130965 AB463335 CU680640	57829	+	BC026734|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164758|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164759|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164760|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK056233|HEATR2|54919|HEAT repeat containing 2##BC013613|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171946|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171944|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171945|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_025154|SUN1|23353|Sad1 and UNC84 domain containing 1##AK022816|SUN1|23353|Sad1 and UNC84 domain containing 1##AK302896|SUN1|23353|Sad1 and UNC84 domain containing 1##AK309120|SUN1|23353|Sad1 and UNC84 domain containing 1##AK022469|SUN1|23353|Sad1 and UNC84 domain containing 1##BX538211|SUN1|23353|Sad1 and UNC84 domain containing 1##BC151827|SUN1|23353|Sad1 and UNC84 domain containing 1##AB018353|SUN1|23353|Sad1 and UNC84 domain containing 1##BC152418|SUN1|23353|Sad1 and UNC84 domain containing 1##BC142707|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001130965|SUN1|23353|Sad1 and UNC84 domain containing 1	0.939067	CTCF.p2:5:0.939
chr13	76444567	76444691	reg1010062.p1	10.812	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-109789	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-234159	+	AF330045 NM_005358	-250060	+	BC013764 TSC_hg19_v1_chr13_-_77460431	1015771	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	1015978	-	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	1121540	+	NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5	0.939079	CTCF.p2:1:0.939
chr19	46692826	46692940	reg1010713.p1	10.812	+	AY358692 NM_001135113	-41384	+	AY672112 NM_001002915	-41845	+	HQ258051 BC130593 BC130597 AY358434 AY672113 NM_207393	-64962	-	AY359013 NM_198541 AY672111	40126	+	TSC_hg19_v1_chr19_+_46800304 NM_152795 AF463492 BC026308 AB118749 AB295039 AK027725 AB527715 BC080551	107430	+	NM_022462 NM_152796 AK297828 AK304747 TSC_hg19_v1_chr19_+_46801682 AK021421 AK021653 AK024095	108777	+	AY358692|IGFL2|147920|IGF-like family member 2##NM_001135113|IGFL2|147920|IGF-like family member 2##AY672112|IGFL2|147920|IGF-like family member 2##NM_001002915|IGFL2|147920|IGF-like family member 2##HQ258051|IGFL3|388555|IGF-like family member 3##BC130593|IGFL3|388555|IGF-like family member 3##BC130597|IGFL3|388555|IGF-like family member 3##AY358434|IGFL3|388555|IGF-like family member 3##AY672113|IGFL3|388555|IGF-like family member 3##NM_207393|IGFL3|388555|IGF-like family member 3##AY359013|IGFL1|374918|IGF-like family member 1##NM_198541|IGFL1|374918|IGF-like family member 1##AY672111|IGFL1|374918|IGF-like family member 1##NM_152795|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AF463492|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##BC026308|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AB118749|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AB295039|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK027725|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##BC080551|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##NM_022462|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##NM_152796|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK297828|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK304747|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK021421|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK021653|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK024095|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	0.694155	CTCF.p2:-1:0.694
chr21	22372033	22372145	reg1009545.p1	10.812	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-1316	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-1399	+	TSC_hg19_v1_chr21_+_22370656 BC052946 NM_004540	-1447	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	3428979	+	TSC_hg19_v1_chr21_+_26934442 AF402776	4562383	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	4607726	-	BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##BC052946|NCAM2|4685|neural cell adhesion molecule 2##NM_004540|NCAM2|4685|neural cell adhesion molecule 2##AK124194|FLJ42200|400860|FLJ42200 protein##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39	0.989949	CTCF.p2:-5:0.990
chr2	162864106	162864228	reg1010698.p1	10.812	+	NM_001178015 NM_001178016 NM_022058 BC051190 AK294767 AK308529 AK309839 BC038298 AK293793 AB040457 BC136269 BC143714 AY376402	-383231	+	AK057394 TSC_hg19_v1_chr2_-_162364248	-499914	-	TSC_hg19_v1_chr2_+_162272908 U49250 AB529217 HQ258587	-591261	+	AY429533 TSC_hg19_v1_chr2_-_162929965 AY429531 AY429532 BC013329 AB451339 AB451488 AB590646 M80536	65795	-	M74777 TSC_hg19_v1_chr2_-_162930507	66336	-	TSC_hg19_v1_chr2_-_162930585 X60708	66410	-	NM_001178015|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##NM_001178016|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##NM_022058|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC051190|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK294767|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK308529|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK309839|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC038298|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK293793|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AB040457|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC136269|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC143714|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AY376402|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK057394|AHCTF1P1|285116|AT hook containing transcription factor 1 pseudogene 1##U49250|TBR1|10716|T-box, brain, 1##HQ258587|TBR1|10716|T-box, brain, 1##AY429533|DPP4|1803|dipeptidyl-peptidase 4##AY429531|DPP4|1803|dipeptidyl-peptidase 4##AY429532|DPP4|1803|dipeptidyl-peptidase 4##BC013329|DPP4|1803|dipeptidyl-peptidase 4##AB451339|DPP4|1803|dipeptidyl-peptidase 4##AB451488|DPP4|1803|dipeptidyl-peptidase 4##M80536|DPP4|1803|dipeptidyl-peptidase 4##M74777|DPP4|1803|dipeptidyl-peptidase 4##X60708|DPP4|1803|dipeptidyl-peptidase 4	0.740984	CTCF.p2:-9:0.741
chr7	30101574	30101692	reg1010394.p1	10.812	+	TSC_hg19_v1_chr7_+_30068250 BC002838 AF308300 AF380162 DQ893498 DQ896458 CU678236	-33342	+	TSC_hg19_v1_chr7_+_30068010 NM_001197026 NM_001197027 NM_032639 AK294857 BC053990 AK023180	-33632	+	CU675039 DQ892525 DQ895737 TSC_hg19_v1_chr7_-_30066286 AK000738 NM_017946 AK309552 AY358643 BC005206	-35412	-	TSC_hg19_v1_chr7_+_30174621 NM_152793 AK096533 AL834391 AK098769 AB528783 AK294982	72949	+	AF513707 NM_147128	222289	+	TSC_hg19_v1_chr7_+_30324515 AF527533	222916	+	BC002838|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF308300|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF380162|PLEKHA8P1|51054|pleckstrin homology domain containing, family A member 8 pseudogene 1##DQ893498|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##DQ896458|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197026|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197027|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_032639|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK294857|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##BC053990|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK023180|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##DQ892525|FKBP14|55033|FK506 binding protein 14, 22 kDa##DQ895737|FKBP14|55033|FK506 binding protein 14, 22 kDa##AK000738|FKBP14|55033|FK506 binding protein 14, 22 kDa##NM_017946|FKBP14|55033|FK506 binding protein 14, 22 kDa##AK309552|FKBP14|55033|FK506 binding protein 14, 22 kDa##AY358643|FKBP14|55033|FK506 binding protein 14, 22 kDa##BC005206|FKBP14|55033|FK506 binding protein 14, 22 kDa##NM_152793|C7orf41|222166|chromosome 7 open reading frame 41##AK096533|C7orf41|222166|chromosome 7 open reading frame 41##AL834391|C7orf41|222166|chromosome 7 open reading frame 41##AK098769|C7orf41|222166|chromosome 7 open reading frame 41##AK294982|C7orf41|222166|chromosome 7 open reading frame 41##AF513707|ZNRF2|223082|zinc and ring finger 2##NM_147128|ZNRF2|223082|zinc and ring finger 2##AF527533|ZNRF2|223082|zinc and ring finger 2	0.573684	CTCF.p2:-2:0.558
chr15	51200737	51200856	reg1009140.p2	10.811	+	TSC_hg19_v1_chr15_-_51200797 AK091906	-35	-	TSC_hg19_v1_chr15_-_51057895 AK075454 AY169314 NM_032802	-142893	-	TSC_hg19_v1_chr15_-_51057864 BC025740 AK315651 AJ345028	-142937	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	131	+	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	186054	-	AY517501 NM_207381	196676	-	AK075454|SPPL2A|84888|signal peptide peptidase-like 2A##AY169314|SPPL2A|84888|signal peptide peptidase-like 2A##NM_032802|SPPL2A|84888|signal peptide peptidase-like 2A##BC025740|SPPL2A|84888|signal peptide peptidase-like 2A##AK315651|SPPL2A|84888|signal peptide peptidase-like 2A##AJ345028|SPPL2A|84888|signal peptide peptidase-like 2A##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3	0.999171	CTCF.p2:6:0.999
chr14	107120121	107120301	reg1005678.p2	10.810	+	DQ454926 GU552751 DQ523845 DQ454743 DQ454741 FJ873884 FJ873949 FJ874082 DQ454745 AY003790 EU350425 EU667608 EF407835 DQ454756 DQ454758 DQ322814 AF343367 AF343413 AF103266 AJ007443 AF103288 FJ385341 AF103034 AF103338 AF062236 JN110970 L03820 HM774324 HM774398 HM774726 HM774904 HM774928 L33041 HM775043 AF408742 AF485449 AF078936 AF485451 AF485453 AF485455 EF633815 DQ524036 DQ524153 DQ926062 HM995709 HM995710 HM995711 HM995712 HM995713 HM995863 HM995864 HM995866 DQ322813 HM996268 AJ245306 AY044149 DQ100802 DQ100910 DQ926129 AB063797 AB063898 AB063899 AF022008 AF099199 AF398961 AF471517 AF471518 AF471519 AF471520 AJ224899 AJ399811 AY554175 AY640527 DQ065678 DQ535356 DQ779565 DQ779566 FJ385288 FN563805 FN563806 FN563810 FN563812 FN563827 FN563828 HQ689733 JF806286 X77017 L48239 AY392926 AY393064 AY452138 X65898 X81752 X81753 BC073782 AF067420 TSC_hg19_v1_chr14_-_107114275 AK097071	-6102	-	S76904 AM279575 EU619960 JN110911 JN111008 HM774600 HM774602 AF103144 AF103285 AY866748 AY866803 DQ187673 DQ187733 DQ322974 DQ840851 DQ840858 DQ840864 AF006522 AF233250 AF471440 EF177980 EU835549 AB063812 AJ399808 AJ579268 DQ205169 DQ535364 DQ535448 DQ926460 Z98683 Z98702 AJ519260 AJ519262 AJ519304 AY392915 AF062171 TSC_hg19_v1_chr14_-_107099662 AK097355 AK097366 AK093636 AK097572 AX748235	-20688	-	AF460776 EF583680 DQ454729 DQ454436 HM995491 DQ454495 DQ454638 DQ454782 DQ523857 DQ454730 DQ454735 DQ454736 DQ454850 DQ454463 DQ454626 DQ454634 DQ454779 AY003758 DQ454909 AY003782 DQ454387 DQ454439 DQ454443 DQ454491 DQ454630 DQ454640 DQ454657 DQ454658 DQ454693 DQ454996 DQ523865 DQ523866 DQ523904 DQ523907 GU552723 GU552763 DQ454683 DQ454954 AY003756 AY003861 DQ454803 DQ454883 DQ454908 DQ454931 DQ454981 Z30558 Z30559 Z30575 Z30577 Z30579 Z30673 DQ454894 HM995480 DQ454567 DQ454586 DQ454595 DQ454611 DQ454623 DQ454649 DQ454661 DQ454790 DQ454858 DQ454930 DQ454940 DQ523860 M18514 AY003863 AY003854 DQ454390 DQ454444 DQ454650 DQ454684 DQ454709 DQ454717 DQ454721 DQ454733 DQ454737 DQ454855 DQ454887 DQ454933 DQ454936 DQ454963 DQ454984 DQ454994 DQ523863 DQ454447 DQ454504 DQ454539 DQ454596 DQ454609 DQ454613 DQ454619 DQ454633 DQ454656 DQ454672 DQ454720 DQ454886 DQ454942 DQ454972 DQ454977 HM116187 DQ454605 DQ454646 DQ454702 DQ454703 DQ454851 HM116123 HM116135 HM116139 HM116144 HM116147 HM116154 HM116217 AY003860 DQ454602 DQ454880 DQ454822 DQ454825 EF091925 EF175400 EF175422 EF175440 EF583671 EU667610 EU814956 GQ232848 GQ232850 GQ232880 DQ454435 EU099241 EU099155 EU099196 AY577297 AY393172 DQ523932 DQ524057 EU099215 EU099224 AM183980 AY393168 AY393171 AY393176 AY393177 AY393178 AM279541 AF103075 AF103349 AF103054 AY180386 AF103162 FJ385403 JN110682 JN110887 AF103140 FJ385332 FJ385336 FJ385376 FJ385404 FJ385416 FJ385417 FJ385421 GQ504863 L26904 AF103343 AF103091 EU620035 AF103271 EU146313 U00585 EU620063 DQ926547 AY062314 U00553 U00557 AF103164 AF103228 DQ005270 HM995488 AY671631 HM996467 AJ245067 DQ523945 DQ523951 DQ523954 DQ523969 DQ523970 DQ523977 DQ523979 DQ524002 DQ524011 DQ524015 DQ524019 DQ524040 DQ524042 DQ524043 DQ524052 DQ524055 DQ524072 DQ524087 DQ524090 DQ524092 DQ524099 DQ524100 DQ524104 DQ524108 DQ524110 DQ524124 DQ524133 AM233755 DQ926051 DQ926252 AB067262 AJ300799 AY671719 AY941873 AY944692 AY944703 AY944704 AY944722 DQ005289 DQ005293 DQ005305 EF178085 FJ385391 HM995323 HM995324 HM995327 HM995330 HM995345 HM995347 HM995388 HM995403 HM995478 HM995483 HM995484 HM995485 HM995486 HM995487 HM995498 HM995499 HM995500 HM995502 HM995534 HM995551 HM995556 HM995557 HM995559 HM995560 HM995932 HM995933 HM995957 HM995994 HM996010 HM996122 HM996155 HM996464 HM996496 AB063721 AB063723 AB063729 AB063744 AB063787 AB063920 AB066903 AB066912 AB066913 AB067270 AB067272 AB067275 AB067296 AF021963 AF035041 AF062230 AF174018 AF174072 AF174080 AF174097 AF174119 AJ006351 AJ239343 AJ244983 AJ245027 AJ413991 AJ413998 AJ413999 AJ574780 AM279612 AY345917 AY640510 AY670733 AY670744 AY670820 AY670910 AY670915 AY670930 AY670942 AY670967 AY670984 AY671004 AY671056 AY671062 AY671072 AY671075 AY671076 AY671082 AY671085 AY671088 AY671194 AY671221 AY671255 AY671326 AY671337 AY671343 AY671346 AY671353 AY671356 AY671359 AY671373 AY671376 AY671378 AY671394 AY671456 AY671457 AY671458 AY671459 AY671460 AY671463 AY671467 AY671470 AY671472 AY671473 AY671476 AY671485 AY671488 AY671493 AY671494 AY671575 AY671588 AY671589 AY671601 AY671606 AY671628 AY671645 AY671666 AY671667 AY671674 AY671692 AY671710 AY671715 AY671717 AY671759 AY866865 AY986386 AY986387 AY986388 AY986389 AY986390 DQ005263 DQ005287 DQ005288 DQ100795 DQ328873 DQ431484 DQ431485 DQ926085 DQ926130 DQ926178 DQ926219 DQ926256 DQ926258 DQ926290 DQ926310 DQ926368 DQ926395 DQ926514 DQ926572 DQ926640 DQ926644 EU794431 FJ385318 FJ456850 GU570380 GU570382 HQ378396 HQ689744 JF806450 L12189 L12197 L23516 L23517 L23563 S73508 U00486 U00493 U31937 U43927 U51549 U95241 U96283 X98749 Z70613 Z70615 Z70628 Z70629 Z70651 Z70652 Z70653 Z70658 Z74672 Z74674 Z74681 Z74682 Z74683 Z74684 Z74685 Z74686 Z74687 Z74688 Z74689 Z74690 DQ926105 AY686879 AY944715 DQ535399 DQ535425 DQ535434 DQ535441 DQ535468 DQ535469 DQ535474 EF177985 EF178038 EF178125 HM996104 HM996425 HM996431 HM996435 Z14199 Z75403 AY392942 AY393076 AY393081 AY393082 Z47242 AY671167 AF062106 AF062108 AF062109 AF062126 AF062129 AF062132 AF062144 AF062166 AF062185 AF062209 AF062228 AF062252 AF062266 AY671032 AY671186 AY671196 AY671241 AY671258 AY671290 AY671296 M88500 S46247 U44791 U86525 X52111 Z11958 Z47349 Z75395 M18518 BC066594 S50735 TSC_hg19_v1_chr14_-_107083721 AK097365 X67906 X69860 X69866 AK097362 BX248300 AK125079	-36634	-	AF103081 JN110643 JN110687 GQ504895 GQ504960 HM774028 HM774358 HM774582 HM774889 X98961 AF165107 AY423163 AF485471 AF485473 AJ306675 AY423172 FN563800 EF633801 HM994977 HM994995 HM995120 HM995247 HM995290 HM995392 HM995519 HM995754 HM995991 HM996039 HM996369 AY866776 DQ322973 DQ926438 AF471404 AJ245345 AJ401162 AM279604 AY866777 DQ100932 DQ100975 DQ926053 DQ926476 GU570357 L19914 Z96976 AB067024 AB067127 AB363182 AB373619 AF231404 AF471217 AF471316 AF471319 AF471331 AF471353 AJ519231 AJ556646 AJ556650 AY640562 AY866705 AY866733 AY971141 DQ065617 DQ065721 DQ100842 DQ535272 DQ535332 DQ926279 EF633803 EF633809 EF633824 EF633825 FJ385293 FJ492933 FN563769 FN563801 FN563814 FN563817 FN563830 FN563831 L38018 Y08405 Y08406 Z96975 Z98724 AJ519258 AJ519228 AJ519314 AJ519323 AJ519243 AJ519280 AJ519310 AJ519335 AJ519268 AJ519313 X62126 TSC_hg19_v1_chr14_-_107122620	2278	-	GQ232991 EU814957 AY003867 GQ233006 AY003724 AY003757 FJ840009 GU552709 AY003791 FJ840366 JF810271 FJ840139 FJ874031 AF017464 HM774748 HM775002 HQ704029 DQ524134 DQ840815 DQ840856 AY530312 AY941926 AY986399 DQ100849 AB067106 AB363089 DQ535377 U00563 U64502 AY392909 AY393069 AY393070 AF062111 AF062168 X81739 X81750 Z14221 TSC_hg19_v1_chr14_-_107131555 AK097017 AK128476 AK130433	11178	-	AY179836 AY179838 AY179841 AY179844 AY179846 AY179847 AY179848 AY179850 AY179854 AY179855 AY179856 AY179858 AY179860 AY003797 DQ454801 EF583677 EU099154 EU099192 AY003810 DQ454853 AY003779 DQ454620 DQ523910 GU552683 AY003802 AY003865 DQ454802 DQ454808 DQ454937 GU552691 GU552774 HM773974 FJ873961 EF441761 DQ454821 AY996332 FJ840044 FJ840053 FJ840143 FJ840193 FJ840194 FJ840196 FJ840204 FJ840239 FJ873866 FJ873869 FJ873895 FJ873936 FJ874043 GQ232929 HM116184 EF583683 EF175392 EU099153 GQ232967 GU358675 EF583681 EU099116 GU358674 JF810254 EF091907 EF175405 EU667599 EF091906 EF091908 EF091909 EF091910 EF175388 EF175390 EF175395 EF175406 EF175412 EF175417 EF175418 EF175420 EF175428 EF407848 EF441755 EU099106 EU350411 EU350412 EU433866 EU433872 EU433873 EU433879 EU667594 EU667595 EU667596 EU667597 EU667598 EU814958 EU814959 EU814960 EU814963 EU814966 FJ694873 FJ694874 GQ232838 GQ232965 GU358670 GU358676 GU358678 GU358682 JF810255 JF810274 AF103216 EF175425 EF583662 EF583663 EF583664 EF583665 EF583667 EF583673 EF583674 EF583675 EF583682 EU350410 M35478 EF407834 EF566907 EF407828 EF407830 EF583660 DQ100847 AY998726 AF209884 AJ007325 EF473862 EU099204 U86786 U86795 U86797 AF308545 AF308549 AF308553 AF308554 AF308559 AF308560 AF308561 EU090245 GQ903485 GQ903489 GQ903492 EU099120 GQ903503 AJ239384 EU099100 EU099208 Z80841 AF103052 AF103307 EU099086 EU099105 EU099142 EU099250 EU099176 EU099293 HM774304 AY515008 EU099141 EU099212 JN110763 JN110845 JN110914 JN111163 L04334 L04335 L04344 FJ385405 FJ385410 FJ385424 FJ385430 FJ385431 HM774065 HM774083 HM774091 HM774102 HM774365 HM774646 HM774653 HM774656 HM774681 HM774757 HM774769 HM774771 HM774786 HM774863 HM774965 HM775047 AF103339 AY515006 DQ523992 EU099090 EU099092 EU099115 EU099162 EU099179 EU099210 EU099218 EU099282 DQ097895 EF624069 EF624074 EF624075 EF624077 EF624128 EF624129 EF624130 EF624131 EF624138 EF624140 EF624141 EF624143 EF624174 EF624175 EF624176 EF624177 EF624179 EF624180 EF624182 EF624183 EF624184 EF624185 EF624186 EF624187 EF624188 EF624189 EF624190 EF624191 EF624192 EF624193 EU099060 EU099066 EU099128 EU099129 EU099145 EU099158 EU099160 EU099161 EU099165 EU099177 EU099178 EU099180 EU099247 EU146320 EU146330 EU146331 EU146336 EU146348 EU146349 EU146350 EU146351 EU146352 EU146353 EU146354 EU146355 EU146356 EU146357 EU146359 EU146383 EU146385 EU146386 M98324 AY393263 AY393515 DQ524120 EU090241 EU099081 EU099095 EU099099 EU099103 EU099111 EU099121 EU099135 EU099136 EU099164 EU099170 EU099174 EU099189 EU099205 EU099207 EU099209 EU099220 AF306353 AJ132852 AM259138 L12098 AF035025 AY392856 AY392858 AY393000 AY393010 AY393106 AY393123 AY393128 AY393133 AY393135 AY393137 AY393138 AY393233 AY393338 AY393342 AY393350 AY393373 AY393495 AY393496 AY393501 AY393503 AY393504 AY393508 AY393513 AY393514 AY393516 AY393517 AY393518 AY393519 AY393520 AY393522 AY393523 AY393525 AY393528 AY393532 AY393535 AY393538 AY393539 AY393540 AY393541 AY393542 AY393543 AY393544 AY393545 AY393546 AY393604 AY393611 AY393682 DQ100913 EU099069 EU099072 EU099083 EU099117 EU099138 EU099167 EU099168 EU099171 EU099175 EU099188 EU099198 EU099201 EU099202 EU099211 EU099219 EU099236 HM994945 AY574947 AY093586 AY093587 DQ100805 DQ100924 JN158773 AY093585 AF035785 AF098366 AY781822 DQ100688 DQ523989 HM995306 U00502 DQ100709 DQ100908 DQ523957 DQ524013 DQ524031 DQ524041 DQ524127 HM994992 HM994994 HM994997 HM994998 HM995013 HM995114 HM995174 HM995178 HM995180 HM995227 HM995241 HM995248 HM995283 HM995304 HM995307 HM995375 HM995447 HM995450 HM995512 HM995517 HM995520 HM995558 HM995678 HM995679 HM995680 HM995681 HM995682 HM995683 HM995684 HM995685 HM995744 HM996065 HM996269 HM996387 AF004321 AB063837 AB063906 AB063914 AB067012 AB067013 AB067018 AB067022 AB067235 AB363092 AF099200 AF174076 AY781868 AY866799 AY941859 DQ065663 DQ065677 DQ065701 DQ840709 DQ926327 EF178030 FJ195540 FJ385306 FJ385381 GQ856069 GQ903493 GQ903497 GQ903502 GQ903514 Z92894 AB027437 AB063666 AB063701 AB063715 AB063720 AB063763 AB063768 AB063778 AB063780 AB063785 AB063831 AB063902 AB063903 AB063921 AB066830 AB066835 AB066837 AB066840 AB066841 AB066842 AB066843 AB066928 AB066936 AB066939 AB066942 AB066944 AB066948 AB066949 AB066953 AB067158 AB067170 AB067305 AB067309 AB067333 AB067383 AB363078 AB363086 AB363094 AB363097 AB373608 AF021950 AF021951 AF021952 AF021970 AF021992 AF035784 AF062098 AF062127 AF062189 AF062216 AF062283 AF115114 AF115115 AF115116 AF115118 AF115119 AF174042 AF174065 AF174069 AF174073 AF174096 AF174109 AF174126 AF193848 AF217789 AF408721 AF460964 AF460965 AJ239346 AJ239357 AJ239365 AJ239372 AJ239376 AJ389170 AJ389172 AJ389179 AJ389181 AJ413995 AJ414000 AJ414001 AJ414002 AJ414004 AJ414008 AJ414009 AJ414010 AJ414015 AJ414017 AJ414020 AJ414021 AJ414023 AJ414027 AJ416562 AJ555258 AJ555262 AJ555275 AM040567 AY033246 AY055485 AY059634 AY281328 AY281329 AY466503 AY485361 AY553640 AY557623 AY557624 AY557625 AY557626 AY557627 AY561708 AY577304 AY781812 AY927666 AY941846 AY941940 D16837 DQ100681 DQ100723 DQ100733 DQ100777 DQ100808 DQ100811 DQ100820 DQ100839 DQ100902 DQ100906 DQ100912 DQ100952 DQ212523 DQ490739 DQ926531 EF555585 EF624068 EF624070 EF624071 EF624072 EF624073 EF624078 EF624079 EF624132 EF624136 EF624178 EF624181 EF624194 EF624195 EU202446 EU202448 EU835547 EU835554 FJ039781 FJ039784 FJ385379 GQ903484 GQ903486 GQ903487 GQ903490 GQ903491 GQ903495 GQ903496 GQ903498 GQ903500 GQ903501 GQ903504 GQ903507 GQ903509 GQ903511 GU570264 GU570271 GU570274 HM152493 HM152496 HM152502 HM152504 HM152527 HQ378401 HQ392874 HQ689778 HQ689781 JN158782 JN159449 JN159454 L14454 L23519 S73955 U00518 U00550 U00583 U71105 U85240 U89903 X64237 X67903 Z18841 Z34906 Z34908 Z34957 Z34959 Z34960 Z34961 Z34962 Z34963 AY927663 JN158517 DQ535261 DQ535284 DQ535416 DQ535445 DQ535451 DQ535460 EF177997 EF178006 EF178014 GU570268 Z35123 M18516 AF062105 AF062117 AF062156 AF062161 AF062175 AF062193 AF062198 AF062208 AF174026 AY172957 L06923 M62723 X65889 Z14214 Z47222 Z47224 Z47227 Z47233 Z47244 Z47245 Z47246 Z47247 Z47248 Z47249 Z47250 Z47251 Z47252 Z47253 Z47254 Z47255 Z47256 Z47257 Z47258 Z47259 Z47260 Z47261 Z47262 Z47263 Z47264 Z47265 Z47266 Z47267 Z47268 Z47269 Z47270 Z47271 Z47272 Z47273 Z80837 Z80853 CU688244 L23561 M24669 M24670 TSC_hg19_v1_chr14_-_107170387 BC062336	50024	-	BC073782|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF067420|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK097366|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC066594|IGH@|3492|immunoglobulin heavy locus##AK097365|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097362|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125079|IGH@|3492|immunoglobulin heavy locus##AK097017|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130433|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF035025|IGHV1-69|28461|immunoglobulin heavy variable 1-69##BC062336|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	3.530505	CTCF.p2:4:0.989	CTCF.p2:-53:0.989	CTCF.p2:62:0.989	CTCF.p2:-73:0.535
chr1	54344313	54344434	reg1009353.p1	10.810	+	AK001269 AL354612 AL354613 TSC_hg19_v1_chr1_-_54304168 BC003082 NM_001168551 NM_018087	-40208	-	DQ141696 AK302910 BX648031 TSC_hg19_v1_chr1_-_54304004 AK298909 AK295000	-40399	-	AK090634 AX746550 NM_147193	-144497	-	AL713668 TSC_hg19_v1_chr1_-_54355462 AK000823 BC064590 AK315183	11062	-	TSC_hg19_v1_chr1_-_54355476 NM_018982	11115	-	AK290780 BC017955 BC107170 BC107171 NM_000792 NM_001039715 NM_001039716 NM_213593 FJ002243 FJ002244 FJ002245 FJ002246 FJ002247 FJ002248 FJ002249 S48220 AY560374 AY560375 AY560376 AY560377 AY560378 AY560379 AY560380 AY560381 AY560382 AY560383	15498	+	AK001269|TMEM48|55706|transmembrane protein 48##AL354612|TMEM48|55706|transmembrane protein 48##AL354613|TMEM48|55706|transmembrane protein 48##BC003082|TMEM48|55706|transmembrane protein 48##NM_001168551|TMEM48|55706|transmembrane protein 48##NM_018087|TMEM48|55706|transmembrane protein 48##DQ141696|TMEM48|55706|transmembrane protein 48##AK302910|TMEM48|55706|transmembrane protein 48##BX648031|TMEM48|55706|transmembrane protein 48##AK298909|TMEM48|55706|transmembrane protein 48##AK295000|TMEM48|55706|transmembrane protein 48##AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1##AL713668|YIPF1|54432|Yip1 domain family, member 1##AK000823|YIPF1|54432|Yip1 domain family, member 1##BC064590|YIPF1|54432|Yip1 domain family, member 1##AK315183|YIPF1|54432|Yip1 domain family, member 1##NM_018982|YIPF1|54432|Yip1 domain family, member 1##AK290780|DIO1|1733|deiodinase, iodothyronine, type I##BC017955|DIO1|1733|deiodinase, iodothyronine, type I##BC107170|DIO1|1733|deiodinase, iodothyronine, type I##BC107171|DIO1|1733|deiodinase, iodothyronine, type I##NM_000792|DIO1|1733|deiodinase, iodothyronine, type I##NM_001039715|DIO1|1733|deiodinase, iodothyronine, type I##NM_001039716|DIO1|1733|deiodinase, iodothyronine, type I##NM_213593|DIO1|1733|deiodinase, iodothyronine, type I##FJ002243|DIO1|1733|deiodinase, iodothyronine, type I##FJ002244|DIO1|1733|deiodinase, iodothyronine, type I##AY560374|DIO1|1733|deiodinase, iodothyronine, type I##AY560375|DIO1|1733|deiodinase, iodothyronine, type I##AY560376|DIO1|1733|deiodinase, iodothyronine, type I##AY560377|DIO1|1733|deiodinase, iodothyronine, type I##AY560378|DIO1|1733|deiodinase, iodothyronine, type I##AY560379|DIO1|1733|deiodinase, iodothyronine, type I##AY560380|DIO1|1733|deiodinase, iodothyronine, type I##AY560381|DIO1|1733|deiodinase, iodothyronine, type I##AY560382|DIO1|1733|deiodinase, iodothyronine, type I##AY560383|DIO1|1733|deiodinase, iodothyronine, type I	0.778818	CTCF.p2:-7:0.779
chr17	37910544	37910701	reg1008965.p2	10.810	+	AK290115 NM_001242443	-14403	+	AK125544 NM_001242442	-15599	+	AK294620 NM_001030002 BC006535 TSC_hg19_v1_chr17_+_37894600	-16043	+	BC032707 AF129512 AY377973 AY377975 AY377976 AY377977 AY377978 AY377979 AY377980 AY377981 AY377982 NM_012481 NM_183228 NM_183229 NM_183230 NM_183231 NM_183232	109808	-	AK292383 NM_198844 NM_199321 BC043152 AY251603 AY251604	113821	+	AF119884 NM_018530	163170	-	AK290115|GRB7|2886|growth factor receptor-bound protein 7##NM_001242443|GRB7|2886|growth factor receptor-bound protein 7##AK125544|GRB7|2886|growth factor receptor-bound protein 7##NM_001242442|GRB7|2886|growth factor receptor-bound protein 7##AK294620|GRB7|2886|growth factor receptor-bound protein 7##NM_001030002|GRB7|2886|growth factor receptor-bound protein 7##BC006535|GRB7|2886|growth factor receptor-bound protein 7##BC032707|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AF129512|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377973|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377975|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377976|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377977|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377978|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377979|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377980|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377981|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377982|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_012481|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183228|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183229|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183230|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183231|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183232|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AK292383|ZPBP2|124626|zona pellucida binding protein 2##NM_198844|ZPBP2|124626|zona pellucida binding protein 2##NM_199321|ZPBP2|124626|zona pellucida binding protein 2##BC043152|ZPBP2|124626|zona pellucida binding protein 2##AY251603|ZPBP2|124626|zona pellucida binding protein 2##AY251604|ZPBP2|124626|zona pellucida binding protein 2##AF119884|GSDMB|55876|gasdermin B##NM_018530|GSDMB|55876|gasdermin B	0.114079	
chr19	2171542	2171690	reg1006898.p2	10.810	+	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	-7478	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-20063	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	-20074	-	BC021037 TSC_hg19_v1_chr19_+_2222534	50858	+	BC032803 TSC_hg19_v1_chr19_+_2232168	60505	+	CR457253 CU679203 TSC_hg19_v1_chr19_-_2236329 AK092742 AX747701 BC003084 BC008966 AK001159 NM_018049	64673	-	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##CR457253|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK092742|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC003084|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC008966|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK001159|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##NM_018049|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1	0.064136	
chr6	129573348	129573485	reg1008671.p2	10.810	+	NM_000426 NM_001079823 Z26653	-369103	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-731760	-	AK124031 NM_001164687	-1333658	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	457910	-	NM_001010876	608999	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	766309	+	NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	0.716746	CTCF.p2:19:0.717
chr12	31270128	31270257	reg1011396.p1	10.809	+	BC047317 BC050522 X99583 AK303139 TSC_hg19_v1_chr12_+_31226840 U33833 U75967 BC001591	-43319	+	TSC_hg19_v1_chr12_+_31226805 U75968 BC011264	-43384	+	TSC_hg19_v1_chr12_+_31226789 BC148224 BC111733 NM_004399 NM_030653 NM_152438 AK297607 BC050069	-43414	+	TSC_hg19_v1_chr12_-_31477084 AK294457	206895	-	BC071966 TSC_hg19_v1_chr12_-_31479052 BC004462 AK027736 AF087885 AK026932 AL157432	208866	-	TSC_hg19_v1_chr12_-_31479085 AF212220	208909	-	BC047317|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050522|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##X99583|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK303139|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U33833|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75967|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC001591|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75968|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC011264|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC148224|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_004399|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_030653|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_152438|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK297607|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050069|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK294457|FAM60A|58516|family with sequence similarity 60, member A##BC071966|FAM60A|58516|family with sequence similarity 60, member A##BC004462|FAM60A|58516|family with sequence similarity 60, member A##AF087885|FAM60A|58516|family with sequence similarity 60, member A##AK026932|FAM60A|58516|family with sequence similarity 60, member A##AL157432|FAM60A|58516|family with sequence similarity 60, member A##AF212220|FAM60A|58516|family with sequence similarity 60, member A	0.0	
chr15	51178160	51178300	reg1009612.p1	10.809	+	TSC_hg19_v1_chr15_-_51057895 AK075454 AY169314 NM_032802	-120327	-	TSC_hg19_v1_chr15_-_51057864 BC025740 AK315651 AJ345028	-120371	-	TSC_hg19_v1_chr15_-_50978995 AY032950 NM_017672	-199233	-	TSC_hg19_v1_chr15_-_51200797 AK091906	22531	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	22697	+	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	208620	-	AK075454|SPPL2A|84888|signal peptide peptidase-like 2A##AY169314|SPPL2A|84888|signal peptide peptidase-like 2A##NM_032802|SPPL2A|84888|signal peptide peptidase-like 2A##BC025740|SPPL2A|84888|signal peptide peptidase-like 2A##AK315651|SPPL2A|84888|signal peptide peptidase-like 2A##AJ345028|SPPL2A|84888|signal peptide peptidase-like 2A##AY032950|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7##NM_017672|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3	0.0	
chr18	51094449	51094571	reg1009865.p1	10.809	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-1227397	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-1227969	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-2370470	-	TSC_hg19_v1_chr18_-_51690988 AL110266	596482	-	AF072246 TSC_hg19_v1_chr18_-_51750614	656027	-	TSC_hg19_v1_chr18_-_51750997 BC032638	656455	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	0.972071	CTCF.p2:1:0.972
chr6	24205287	24205417	reg1009637.p1	10.809	+	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	-78922	+	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	-1635627	+	X54394 X54393 GQ305133 M58594 NM_001163558	-1902305	-	AF181722 NM_181337	151778	+	AF181721 NM_016356	152927	-	BC050704 NM_001195610	178167	-	AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1##AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2##BC050704|DCDC2|51473|doublecortin domain containing 2##NM_001195610|DCDC2|51473|doublecortin domain containing 2	0.0	
chr8	100010231	100010342	reg1008468.p2	10.809	+	NM_001142462 NM_053001 TSC_hg19_v1_chr8_+_99956669 AK074518 AK291491 AK310994 BC016936 AY038073	-53629	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	-172439	-	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	-570940	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	15209	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	15226	+	TSC_hg19_v1_chr8_+_100025537 BC094749	15304	+	NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)##NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)##AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)##AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)##AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)##BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)##AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)##U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3##BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##BC094749|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)	0.770272	CTCF.p2:1:0.770
chr14	53521742	53521888	reg1012252.p1	10.808	+	TSC_hg19_v1_chr14_-_53417903 BC017327 NM_001134999 NM_001135000 NM_006832	-103948	-	Z24725 AF443279 TSC_hg19_v1_chr14_-_53417769 BX161467 AK291738	-104095	-	TSC_hg19_v1_chr14_-_53417272 EU979385 CU675940 EU831994 EU832087	-104536	-	TSC_hg19_v1_chr14_-_53619887 AK125372	98058	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	98153	-	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	98235	-	BC017327|FERMT2|10979|fermitin family member 2##NM_001134999|FERMT2|10979|fermitin family member 2##NM_001135000|FERMT2|10979|fermitin family member 2##NM_006832|FERMT2|10979|fermitin family member 2##Z24725|FERMT2|10979|fermitin family member 2##AF443279|FERMT2|10979|fermitin family member 2##BX161467|FERMT2|10979|fermitin family member 2##AK291738|FERMT2|10979|fermitin family member 2##EU979385|FERMT2|10979|fermitin family member 2##EU831994|FERMT2|10979|fermitin family member 2##EU832087|FERMT2|10979|fermitin family member 2##AK125372|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1	0.997338	CTCF.p2:-2:0.997
chr4	72579434	72579572	reg1010699.p1	10.808	+	BC030977 NM_003759 AF007216 AK308038 CU689062	-374636	+	AF069510 AB470072 AF053753 AF053754 AF310248 EF531618 TSC_hg19_v1_chr4_+_72102322	-477217	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	-526780	+	AB591002 CU691194 M12654 TSC_hg19_v1_chr4_-_72649797 AK290827 AK298433 AK312971 BC057228 BC022310 X03178 AK315853 NM_000583	70403	-	AK309595 NM_001204307	90254	-	AK223458 NM_001204306	91733	-	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK290827|GC|2638|group-specific component (vitamin D binding protein)##AK298433|GC|2638|group-specific component (vitamin D binding protein)##AK312971|GC|2638|group-specific component (vitamin D binding protein)##BC057228|GC|2638|group-specific component (vitamin D binding protein)##BC022310|GC|2638|group-specific component (vitamin D binding protein)##X03178|GC|2638|group-specific component (vitamin D binding protein)##AK315853|GC|2638|group-specific component (vitamin D binding protein)##NM_000583|GC|2638|group-specific component (vitamin D binding protein)##AK309595|GC|2638|group-specific component (vitamin D binding protein)##NM_001204307|GC|2638|group-specific component (vitamin D binding protein)##AK223458|GC|2638|group-specific component (vitamin D binding protein)##NM_001204306|GC|2638|group-specific component (vitamin D binding protein)	0.922217	CTCF.p2:20:0.922
chr7	38836630	38836787	reg1010935.p1	10.808	+	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	-165631	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	-165746	-	TSC_hg19_v1_chr7_-_38389583 BC035592	-447119	-	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	112085	-	NM_001166018 NM_007252	180900	+	TSC_hg19_v1_chr7_+_39606002 AK314937 NM_020192 AK293511 AF226046 BC022043 CR457198 DQ892829 DQ896074 DQ896075	769261	+	X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin##BC035592|TRGV5|6978|T cell receptor gamma variable 5##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_001166018|POU6F2|11281|POU class 6 homeobox 2##NM_007252|POU6F2|11281|POU class 6 homeobox 2##AK314937|YAE1D1|57002|Yae1 domain containing 1##NM_020192|YAE1D1|57002|Yae1 domain containing 1##AF226046|YAE1D1|57002|Yae1 domain containing 1##BC022043|YAE1D1|57002|Yae1 domain containing 1##CR457198|YAE1D1|57002|Yae1 domain containing 1##DQ892829|YAE1D1|57002|Yae1 domain containing 1##DQ896074|YAE1D1|57002|Yae1 domain containing 1##DQ896075|YAE1D1|57002|Yae1 domain containing 1	0.996712	CTCF.p2:-1:0.997
chr9	71183100	71183218	reg1009150.p1	10.808	+	DQ890797 DQ893952 BC029780 NM_153237 TSC_hg19_v1_chr9_-_71155800	-27394	-	BC033073 NM_021965	-211345	+	AY344641 AY344642 NM_199135 BC137365 BC137366 EU446685 BC103887	-265335	+	TSC_hg19_v1_chr9_+_71320206 AK295587 AK292734 NM_003558	137217	+	TSC_hg19_v1_chr9_+_71394980 NM_138333 BC013062 AK126379 AK304099	211792	+	CU680482 TSC_hg19_v1_chr9_+_71395147	211957	+	DQ890797|C9orf71|169693|chromosome 9 open reading frame 71##DQ893952|C9orf71|169693|chromosome 9 open reading frame 71##BC029780|C9orf71|169693|chromosome 9 open reading frame 71##NM_153237|C9orf71|169693|chromosome 9 open reading frame 71##BC033073|PGM5|5239|phosphoglucomutase 5##NM_021965|PGM5|5239|phosphoglucomutase 5##AY344641|FOXD4L3|286380|forkhead box D4-like 3##AY344642|FOXD4L3|286380|forkhead box D4-like 3##NM_199135|FOXD4L3|286380|forkhead box D4-like 3##BC137365|FOXD4L6|653404|forkhead box D4-like 6##BC137366|FOXD4L6|653404|forkhead box D4-like 6##EU446685|FOXD4L6|653404|forkhead box D4-like 6##BC103887|FOXD4L6|653404|forkhead box D4-like 6##AK295587|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##AK292734|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_003558|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_138333|FAM122A|116224|family with sequence similarity 122A##BC013062|FAM122A|116224|family with sequence similarity 122A##AK126379|FAM122A|116224|family with sequence similarity 122A	0.364011	CTCF.p2:2:0.364
chr11	97012024	97012146	reg1009655.p1	10.807	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-888911	+	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	-889043	-	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	-935682	-	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	1879664	+	AB013802 AB013803 NM_175566	2414788	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	3546043	+	AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42	0.882623	CTCF.p2:9:0.883
chr17	18467527	18467653	reg1009611.p2	10.807	+	AK296659 NM_001040078 AK315818 BC073889 BC105943 TSC_hg19_v1_chr17_+_18380141 CU687266	-87458	+	BC036791 NM_001145127 AK298286 BC026998	-186503	+	TSC_hg19_v1_chr17_-_18266810 BC007979 BC022874 BC038598 AK223552 AK298415 AK302834 AF017065 NM_004169 NM_148918	-200806	-	BC101585 BC104815 BC143561 TSC_hg19_v1_chr17_-_18528914 BC062767 BX647826 AK093811 AX748319	61317	-	NM_001039397	80149	-	NM_001145045	117981	-	AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001040078|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##AK315818|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC073889|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##BC036791|EVPLL|645027|envoplakin-like##NM_001145127|EVPLL|645027|envoplakin-like##AK298286|EVPLL|645027|envoplakin-like##BC026998|EVPLL|645027|envoplakin-like##BC007979|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC022874|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC038598|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK223552|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK298415|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK302834|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AF017065|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_004169|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_148918|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC101585|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC104815|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC143561|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC062767|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BX647826|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##AK093811|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##NM_001039397|TBC1D28|254272|TBC1 domain family, member 28##NM_001145045|ZNF286B|729288|zinc finger protein 286B	0.209097	CTCF.p2:5:0.209
chr1	9327294	9327397	reg1007214.p1	10.807	+	CR749282 TSC_hg19_v1_chr1_+_9299950	-27407	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	-32428	+	TSC_hg19_v1_chr1_+_9294832 BC081559	-32530	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	25592	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	25624	+	TSC_hg19_v1_chr1_+_9415945 CU677397	88601	+	CR749282|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1	0.014591	
chr22	33445224	33445353	reg1011716.p1	10.807	+	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-42562	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-247536	+	TSC_hg19_v1_chr22_+_33197690 AK311702 AK314871 AK298126 BC013086 U14394 AX801509 U02571 S78453 U67195	-247594	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	9067	-	AJ007583 AB011181 NM_004737 NM_133642	871082	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	2016861	+	CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK314871|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK298126|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC013086|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U14394|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U02571|TIMP3|7078|TIMP metallopeptidase inhibitor 3##S78453|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U67195|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox	0.994066	CTCF.p2:15:0.994
chr9	33813817	33813967	reg1011890.p1	10.807	+	BC069476 BC069494 NM_002771 X15505 D45417	-18328	+	AB298285 NM_001197097 NM_007343 AB528734 X71345 X72781 TSC_hg19_v1_chr9_+_33750676 BC030238 AY052783 AB298286 NM_001197098	-63252	+	TSC_hg19_v1_chr9_+_33624216 M62898	-189674	+	TSC_hg19_v1_chr9_+_33817170 NM_017811	3292	+	TSC_hg19_v1_chr9_+_33817325 BC047584 AK000426 BC004862 AK225880	3502	+	TSC_hg19_v1_chr9_+_33817704 AJ240087 CR457233	3780	+	BC069476|PRSS3|5646|protease, serine, 3##BC069494|PRSS3|5646|protease, serine, 3##NM_002771|PRSS3|5646|protease, serine, 3##X15505|PRSS3|5646|protease, serine, 3##D45417|PRSS3|5646|protease, serine, 3##AB298285|PRSS3|5646|protease, serine, 3##NM_001197097|PRSS3|5646|protease, serine, 3##NM_007343|PRSS3|5646|protease, serine, 3##X71345|PRSS3|5646|protease, serine, 3##X72781|PRSS3|5646|protease, serine, 3##BC030238|PRSS3|5646|protease, serine, 3##AY052783|PRSS3|5646|protease, serine, 3##AB298286|PRSS3|5646|protease, serine, 3##NM_001197098|PRSS3|5646|protease, serine, 3##M62898|ANXA2P2|304|annexin A2 pseudogene 2##NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC047584|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK000426|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC004862|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK225880|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AJ240087|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##CR457233|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2	0.999919	CTCF.p2:-27:1.000
chrX	17064761	17064885	reg1009964.p1	10.807	+	TSC_hg19_v1_chrX_+_16964847 AF010233 NM_001080975 NM_004726 AF511533 AF512951	-99891	+	TSC_hg19_v1_chrX_-_16888462 NM_002893	-176326	-	TSC_hg19_v1_chrX_-_16888456 X72841	-176372	-	TSC_hg19_v1_chrX_+_17393357 AK302437	328531	+	TSC_hg19_v1_chrX_+_17393541 AY436752 NM_198270	328719	+	TSC_hg19_v1_chrX_+_17393806 BC136415 BC171763	328988	+	AF010233|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_001080975|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_004726|REPS2|9185|RALBP1 associated Eps domain containing 2##AF511533|REPS2|9185|RALBP1 associated Eps domain containing 2##AF512951|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_002893|RBBP7|5931|retinoblastoma binding protein 7##X72841|RBBP7|5931|retinoblastoma binding protein 7##AK302437|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AY436752|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_198270|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC136415|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC171763|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	0.93771	CTCF.p2:2:0.938
chr10	102819847	102819970	reg1010967.p1	10.806	+	TSC_hg19_v1_chr10_+_102792167 AK299405 BC000124	-27719	+	AK074707 TSC_hg19_v1_chr10_+_102792161	-27747	+	TSC_hg19_v1_chr10_+_102790985 NM_030971	-28919	+	TSC_hg19_v1_chr10_+_102820998 AK172864 NM_030929	1070	+	TSC_hg19_v1_chr10_+_102821745 BC007758 AY359087 AK225949 AK172862	1751	+	BC019674 NM_001085398	70994	-	AK299405|SFXN3|81855|sideroflexin 3##BC000124|SFXN3|81855|sideroflexin 3##AK074707|SFXN3|81855|sideroflexin 3##NM_030971|SFXN3|81855|sideroflexin 3##AK172864|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##NM_030929|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##BC007758|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AY359087|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK225949|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172862|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor	0.997411	CTCF.p2:7:0.997
chr15	68503249	68503374	reg1009565.p3	10.806	+	TSC_hg19_v1_chr15_-_68498423 BX640817 NM_001031733 NM_033429	-4895	-	TSC_hg19_v1_chr15_-_68497633 BX640702 BC009516 AK092628 AK296804 AX747637	-5674	-	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	-156650	+	CR457244 DQ891480 EU176598 BC013130 BC010849 TSC_hg19_v1_chr15_-_68522011 AK291175 AK293155 AK000568 AK027604 NM_017882	18695	-	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	66782	+	TSC_hg19_v1_chr15_+_68570434 AK290167	67113	+	BX640817|CALML4|91860|calmodulin-like 4##NM_001031733|CALML4|91860|calmodulin-like 4##NM_033429|CALML4|91860|calmodulin-like 4##BX640702|CALML4|91860|calmodulin-like 4##BC009516|CALML4|91860|calmodulin-like 4##AK092628|CALML4|91860|calmodulin-like 4##AK296804|CALML4|91860|calmodulin-like 4##BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1##CR457244|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##DQ891480|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##EU176598|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC013130|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC010849|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK291175|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK293155|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK000568|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK027604|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##NM_017882|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)	1.047346	CTCF.p2:9:1.000
chr9	3467727	3467852	reg1009142.p1	10.806	+	AK127804 TSC_hg19_v1_chr9_-_3223066	-244753	-	TSC_hg19_v1_chr9_-_2844102 AK315531 NM_014878	-623676	-	TSC_hg19_v1_chr9_-_2844084 AL832245 AK225953 AL832239	-623700	-	TSC_hg19_v1_chr9_-_3525889 AK310956 AK289540	58050	-	TSC_hg19_v1_chr9_-_3525983 BC022191 NM_002919 NM_134428	58215	-	TSC_hg19_v1_chr9_+_3526079 AK125504	58299	+	AK315531|KIAA0020|9933|KIAA0020##NM_014878|KIAA0020|9933|KIAA0020##AL832245|KIAA0020|9933|KIAA0020##AK225953|KIAA0020|9933|KIAA0020##AL832239|KIAA0020|9933|KIAA0020##AK310956|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK289540|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##BC022191|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_002919|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_134428|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)	0.765723	CTCF.p2:-13:0.766
chr20	57022969	57023092	reg1008922.p2	10.805	+	AK124571 TSC_hg19_v1_chr20_+_57022525	-538	+	TSC_hg19_v1_chr20_+_56964291 BC001712 AF086628 AF086629 AK298036 AK127252 AB529043 CU674842 BT009811	-58576	+	TSC_hg19_v1_chr20_+_56964286 NM_001195677 NM_004738 AK023241 AY358464	-58806	+	BC101758 BC101760 AK074647 NM_153360 AK293299	66868	-	TSC_hg19_v1_chr20_+_57226338 AK316547 NM_001001433 NM_001134772 NM_001134773 NM_001204868 NM_003763 AK304867 AB209296	203358	+	TSC_hg19_v1_chr20_+_57226873 BC019042 AF008935 AF008936 AF008937 BC073876 AF038897 AF428146 AK026970	203961	+	AK124571|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BC001712|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086628|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086629|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK298036|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK127252|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BT009811|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##NM_001195677|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##NM_004738|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK023241|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AY358464|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BC101758|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##BC101760|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK074647|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##NM_153360|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK293299|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK316547|STX16|8675|syntaxin 16##NM_001001433|STX16|8675|syntaxin 16##NM_001134772|STX16|8675|syntaxin 16##NM_001134773|STX16|8675|syntaxin 16##NM_001204868|STX16|8675|syntaxin 16##NM_003763|STX16|8675|syntaxin 16##AK304867|STX16|8675|syntaxin 16##AB209296|STX16-NPEPL1|100534593|STX16-NPEPL1 readthrough (non-protein coding)##BC019042|STX16|8675|syntaxin 16##AF008935|STX16|8675|syntaxin 16##AF008936|STX16|8675|syntaxin 16##AF008937|STX16|8675|syntaxin 16##BC073876|STX16|8675|syntaxin 16##AF038897|STX16|8675|syntaxin 16##AF428146|STX16|8675|syntaxin 16##AK026970|STX16|8675|syntaxin 16	1.01057	CTCF.p2:-7:0.994
chr13	27980550	27980694	reg1011114.p1	10.804	+	TSC_hg19_v1_chr13_+_27844966 HQ258126	-135615	+	AY439004 NM_206827	-136159	+	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	-154880	+	BC143711 D32257 NM_002097 TSC_hg19_v1_chr13_+_27998761 AB590496 U14134 U20272	18149	+	TSC_hg19_v1_chr13_-_28024327 BC039599 NM_001166262 NM_001166261	43687	-	AF265440 TSC_hg19_v1_chr13_-_28024702 BC046166 NM_001166263 NM_152912	44100	-	HQ258126|RASL11A|387496|RAS-like, family 11, member A##AY439004|RASL11A|387496|RAS-like, family 11, member A##NM_206827|RASL11A|387496|RAS-like, family 11, member A##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21##BC143711|GTF3A|2971|general transcription factor IIIA##D32257|GTF3A|2971|general transcription factor IIIA##NM_002097|GTF3A|2971|general transcription factor IIIA##U14134|GTF3A|2971|general transcription factor IIIA##U20272|GTF3A|2971|general transcription factor IIIA##BC039599|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166262|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166261|MTIF3|219402|mitochondrial translational initiation factor 3##BC046166|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166263|MTIF3|219402|mitochondrial translational initiation factor 3##NM_152912|MTIF3|219402|mitochondrial translational initiation factor 3	0.868822	CTCF.p2:-11:0.869
chr6	14046832	14046943	reg1009070.p1	10.804	+	NM_001165033 AK090576 AX746519	-121444	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	-121721	+	NM_001165034	-122211	+	NM_001251901	70599	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	71018	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	71135	+	NM_001165033|RNF182|221687|ring finger protein 182##AK090576|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182##NM_001165034|RNF182|221687|ring finger protein 182##NM_001251901|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule	0.0	
chr7	42916175	42916306	reg1009104.p1	10.804	+	TSC_hg19_v1_chr7_-_42276797 AK308429	-639445	-	NM_000168	-639623	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-1173555	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	35349	-	BC002900 AB528708 CR450317 CU690460 D00760 BC047697 TSC_hg19_v1_chr7_-_42971774 AK311369 BX641097 AK222976	55513	-	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	55561	-	AK308429|GLI3|2737|GLI family zinc finger 3##NM_000168|GLI3|2737|GLI family zinc finger 3##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25##BC002900|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##CR450317|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##D00760|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC047697|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BX641097|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK222976|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2	0.199672	
chr10	124802978	124803134	reg1010034.p2	10.803	+	TSC_hg19_v1_chr10_+_124768521 BC013756 U12778 AK314241 AB527625 CU680672 AL831821	-34528	+	TSC_hg19_v1_chr10_+_124768471 NM_001609 AK298638	-34608	+	CR749800 TSC_hg19_v1_chr10_-_124768312 AK226143 AK026626 NM_022466 BX647958 BC022564	-34785	-	NM_001105574 TSC_hg19_v1_chr10_+_124895620	92537	+	NM_005519	104581	+	NM_001007793 NM_004725 TSC_hg19_v1_chr10_+_124913846	110749	+	BC013756|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##U12778|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK314241|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AL831821|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##NM_001609|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK298638|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##CR749800|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##AK226143|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##AK026626|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##NM_022466|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##BX647958|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##BC022564|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##NM_001105574|HMX3|340784|H6 family homeobox 3##NM_005519|HMX2|3167|H6 family homeobox 2##NM_001007793|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##NM_004725|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)	0.723737	CTCF.p2:-13:0.699
chr17	32747423	32747569	reg1009960.p2	10.803	+	AB528767 BC105073 BC105075 M57502 AK312183 NM_002981	-57281	-	NM_005408 U59808 AJ001634 BC008621 U46767 X98306 AB463483 CU679005 DQ891497 DQ894688 BT007385 CR450337 Z77650	-63965	+	Y16645 NM_005623	-101435	+	BC133004 BC136710 BC142651 AK126768 NM_207454	158856	-	NM_207313	160271	+	CU693272 AK301773 TSC_hg19_v1_chr17_-_33288425 AK225729 BC026125 AK225728 D78333	540939	-	BC105073|CCL1|6346|chemokine (C-C motif) ligand 1##BC105075|CCL1|6346|chemokine (C-C motif) ligand 1##M57502|CCL1|6346|chemokine (C-C motif) ligand 1##AK312183|CCL1|6346|chemokine (C-C motif) ligand 1##NM_002981|CCL1|6346|chemokine (C-C motif) ligand 1##NM_005408|CCL13|6357|chemokine (C-C motif) ligand 13##U59808|CCL13|6357|chemokine (C-C motif) ligand 13##AJ001634|CCL13|6357|chemokine (C-C motif) ligand 13##BC008621|CCL13|6357|chemokine (C-C motif) ligand 13##U46767|CCL13|6357|chemokine (C-C motif) ligand 13##X98306|CCL13|6357|chemokine (C-C motif) ligand 13##DQ891497|CCL13|6357|chemokine (C-C motif) ligand 13##DQ894688|CCL13|6357|chemokine (C-C motif) ligand 13##BT007385|CCL13|6357|chemokine (C-C motif) ligand 13##CR450337|CCL13|6357|chemokine (C-C motif) ligand 13##Z77650|CCL13|6357|chemokine (C-C motif) ligand 13##Y16645|CCL8|6355|chemokine (C-C motif) ligand 8##NM_005623|CCL8|6355|chemokine (C-C motif) ligand 8##BC133004|C17orf102|400591|chromosome 17 open reading frame 102##BC136710|C17orf102|400591|chromosome 17 open reading frame 102##BC142651|C17orf102|400591|chromosome 17 open reading frame 102##AK126768|C17orf102|400591|chromosome 17 open reading frame 102##NM_207454|C17orf102|400591|chromosome 17 open reading frame 102##NM_207313|TMEM132E|124842|transmembrane protein 132E##AK301773|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225729|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC026125|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225728|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##D78333|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)	0.999541	CTCF.p2:-5:1.000
chr5	35777856	35777960	reg1008493.p1	10.803	+	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	-159899	+	NM_000949	-547086	-	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	-547331	-	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	79125	+	NM_001042625 BC017586 NM_144647	160900	-	CU686633 BC068446 AK308046 AK290809 AK057066 AK303770 AK315851 AK296136 NM_152404	213530	-	BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##NM_000949|PRLR|5618|prolactin receptor##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like##BC068446|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK308046|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK290809|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK057066|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK303770|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK315851|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK296136|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_152404|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	0.983218	CTCF.p2:1:0.983
chr12	40501463	40501594	reg1010801.p1	10.802	+	TSC_hg19_v1_chr12_-_40499870 BC047507	-1656	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	-1839	-	BC038754 NM_001031748 BC048120 AK097445	-481533	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	117331	+	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	584754	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	1080680	+	BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40##NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4	0.998548	CTCF.p2:-7:0.999
chr18	74514104	74514221	reg1011897.p1	10.802	+	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	-307007	-	BC108287 TSC_hg19_v1_chr18_-_74092260	-421912	-	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-1374540	-	TSC_hg19_v1_chr18_-_74534239 BC032908	20077	-	TSC_hg19_v1_chr18_+_74534512 BX648028	20348	+	AF085243 AF085244 NM_007345	21953	+	D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC108287|ZNF516|9658|zinc finger protein 516##BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##BC032908|LOC100131655|100131655|uncharacterized LOC100131655##BX648028|ZNF236|7776|zinc finger protein 236##AF085243|ZNF236|7776|zinc finger protein 236##AF085244|ZNF236|7776|zinc finger protein 236##NM_007345|ZNF236|7776|zinc finger protein 236	0.709891	CTCF.p2:-2:0.710
chr10	109964308	109964426	reg1008859.p2	10.801	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-1039991	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-1505308	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-3563322	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	1718842	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	1718910	-	NM_019903 AB209810 BC057285	1801414	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.0	
chr10	120327950	120328056	reg1008978.p1	10.801	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	-226179	-	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	-521573	+	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	-521959	-	AK313269 AK290461 NM_004248	27155	-	CU691560 TSC_hg19_v1_chr10_-_120514298	186284	-	TSC_hg19_v1_chr10_-_120514483 AJ544771 AK097728	186508	-	AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A##BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AK313269|PRLHR|2834|prolactin releasing hormone receptor##AK290461|PRLHR|2834|prolactin releasing hormone receptor##NM_004248|PRLHR|2834|prolactin releasing hormone receptor##AJ544771|C10orf46|143384|chromosome 10 open reading frame 46##AK097728|C10orf46|143384|chromosome 10 open reading frame 46	0.939216	CTCF.p2:-18:0.939
chr1	10002518	10002661	reg1010206.p1	10.801	+	TSC_hg19_v1_chr1_-_9970314 AB021262 BC035794 BC014300 NM_001012329 NM_020248	-32280	-	AF438482 NM_001009566 NM_014944 AB020718	-118023	-	TSC_hg19_v1_chr1_-_9884024 BC033902	-118545	-	BC063443 NM_032368	236	-	TSC_hg19_v1_chr1_-_10003358 AB060688 BC007240 AK304348 AK312550	784	-	NM_022787 BC014943 TSC_hg19_v1_chr1_+_10003497 AK026065 AK222920	907	+	AB021262|CTNNBIP1|56998|catenin, beta interacting protein 1##BC014300|CTNNBIP1|56998|catenin, beta interacting protein 1##NM_001012329|CTNNBIP1|56998|catenin, beta interacting protein 1##NM_020248|CTNNBIP1|56998|catenin, beta interacting protein 1##AF438482|CLSTN1|22883|calsyntenin 1##NM_001009566|CLSTN1|22883|calsyntenin 1##NM_014944|CLSTN1|22883|calsyntenin 1##AB020718|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1##BC063443|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##NM_032368|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AB060688|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##BC007240|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK304348|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK312550|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##NM_022787|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##BC014943|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK026065|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK222920|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1	0.529388	CTCF.p2:-6:0.529
chr11	67340273	67340407	reg1011506.p1	10.801	+	AB528802 AF169154 BC018476 NM_016366	-49492	-	BC002850 NM_005851 AK308725 TSC_hg19_v1_chr11_-_67276169	-64201	-	TSC_hg19_v1_chr11_-_67275634 BT006909 CR457050 CR542042 AK310197 AK001498 BC016704 AF089814	-64707	-	NM_000852 TSC_hg19_v1_chr11_+_67351145	10766	+	TSC_hg19_v1_chr11_+_67351285 AY887902 BC010915 BC044846 X15480 U62589 U30897	10949	+	NM_001166102 NM_007103 TSC_hg19_v1_chr11_+_67374428 AF092131 AF053070 BC008146 AK310537 AK223061 AK293522 AK300726 BC015645 AB590249 CR456739 CU677379 CU678877 DQ893236 DQ896566 AK316122	34061	+	AF169154|CABP2|51475|calcium binding protein 2##BC018476|CABP2|51475|calcium binding protein 2##NM_016366|CABP2|51475|calcium binding protein 2##BC002850|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##NM_005851|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BT006909|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR457050|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR542042|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK310197|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK001498|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BC016704|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AF089814|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##NM_000852|GSTP1|2950|glutathione S-transferase pi 1##BC010915|GSTP1|2950|glutathione S-transferase pi 1##BC044846|GSTP1|2950|glutathione S-transferase pi 1##X15480|GSTP1|2950|glutathione S-transferase pi 1##U62589|GSTP1|2950|glutathione S-transferase pi 1##U30897|GSTP1|2950|glutathione S-transferase pi 1##NM_001166102|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_007103|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF092131|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF053070|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC008146|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK310537|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK223061|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK293522|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK300726|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC015645|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##CR456739|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ893236|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ896566|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK316122|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa	0.694155	CTCF.p2:-15:0.694
chr11	7119607	7119745	reg1011595.p1	10.801	+	NM_014469 AK292271 AF069682 BC057796 BC029295 AB527964	-9419	+	AK310900 NM_176822	-77977	+	BC136772 BC144405 AF056617 AK313462 TSC_hg19_v1_chr11_-_7041578 NM_013249	-78151	-	TSC_hg19_v1_chr11_+_7273164 BC046367 NM_175733 AK315013	153517	+	AK055003 AB527847 CU692338 TSC_hg19_v1_chr11_+_7273475	153761	+	NM_198474 BX647908 BC092488 TSC_hg19_v1_chr11_+_7506763 AK298137 BC035895 AK297778	387041	+	NM_014469|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AK292271|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AF069682|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC057796|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC029295|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AK310900|NLRP14|338323|NLR family, pyrin domain containing 14##NM_176822|NLRP14|338323|NLR family, pyrin domain containing 14##BC136772|ZNF214|7761|zinc finger protein 214##BC144405|ZNF214|7761|zinc finger protein 214##AF056617|ZNF214|7761|zinc finger protein 214##AK313462|ZNF214|7761|zinc finger protein 214##NM_013249|ZNF214|7761|zinc finger protein 214##BC046367|SYT9|143425|synaptotagmin IX##NM_175733|SYT9|143425|synaptotagmin IX##AK315013|SYT9|143425|synaptotagmin IX##AK055003|SYT9|143425|synaptotagmin IX##NM_198474|OLFML1|283298|olfactomedin-like 1##BX647908|OLFML1|283298|olfactomedin-like 1##BC092488|OLFML1|283298|olfactomedin-like 1##AK298137|OLFML1|283298|olfactomedin-like 1##BC035895|OLFML1|283298|olfactomedin-like 1##AK297778|OLFML1|283298|olfactomedin-like 1	0.916004	CTCF.p2:-18:0.916
chr13	31618634	31618770	reg1010246.p1	10.801	+	TSC_hg19_v1_chr13_+_31506809 BC030277 NM_152325 CU688876	-111872	+	NM_032849 AK055635 TSC_hg19_v1_chr13_+_31480407 AL832478 BC040165 BC101624 BC101626 CU691826	-138222	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	-308987	+	CU691504 DQ891727 DQ894904 AF039695 TSC_hg19_v1_chr13_-_31735849	117092	-	AB003333 TSC_hg19_v1_chr13_-_31736042 BC037553 AB003334 D86956 BC018124 AK314576 AK293955 NM_006644 AK302294 AK303029 AK311464 AK307597	117401	-	TSC_hg19_v1_chr13_+_31774111 NM_194318	155401	+	BC030277|C13orf26|122046|chromosome 13 open reading frame 26##NM_152325|C13orf26|122046|chromosome 13 open reading frame 26##NM_032849|C13orf33|84935|chromosome 13 open reading frame 33##AK055635|C13orf33|84935|chromosome 13 open reading frame 33##BC040165|C13orf33|84935|chromosome 13 open reading frame 33##BC101624|C13orf33|84935|chromosome 13 open reading frame 33##BC101626|C13orf33|84935|chromosome 13 open reading frame 33##BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891727|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ894904|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AF039695|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AB003333|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC037553|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AB003334|HSPH1|10808|heat shock 105kDa/110kDa protein 1##D86956|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC018124|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK314576|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK293955|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_006644|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK302294|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK303029|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK311464|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK307597|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like	0.998543	CTCF.p2:10:0.999
chr22	26899038	26899141	reg1008624.p1	10.801	+	TSC_hg19_v1_chr22_+_26879842 BC066962 AK293916 NM_001013694	-19259	+	TSC_hg19_v1_chr22_-_26879788 AL713795 BC050285 AB051454 BC028625 NM_022081	-19299	-	TSC_hg19_v1_chr22_-_26879750 AK057648 AK290211	-19347	-	TSC_hg19_v1_chr22_-_26908440 AK025443 AK299964 BC011599 BC033080 AL080147 NM_001008697 NM_012143 AK298303 AL050258	9304	-	TSC_hg19_v1_chr22_+_26908507 AK057443	9404	+	AK075139 NM_001008566	62262	-	BC066962|SRRD|402055|SRR1 domain containing##AK293916|SRRD|402055|SRR1 domain containing##NM_001013694|SRRD|402055|SRR1 domain containing##AL713795|HPS4|89781|Hermansky-Pudlak syndrome 4##BC050285|HPS4|89781|Hermansky-Pudlak syndrome 4##AB051454|HPS4|89781|Hermansky-Pudlak syndrome 4##BC028625|HPS4|89781|Hermansky-Pudlak syndrome 4##NM_022081|HPS4|89781|Hermansky-Pudlak syndrome 4##AK057648|HPS4|89781|Hermansky-Pudlak syndrome 4##AK290211|HPS4|89781|Hermansky-Pudlak syndrome 4##AK025443|TFIP11|24144|tuftelin interacting protein 11##AK299964|TFIP11|24144|tuftelin interacting protein 11##BC011599|TFIP11|24144|tuftelin interacting protein 11##BC033080|TFIP11|24144|tuftelin interacting protein 11##AL080147|TFIP11|24144|tuftelin interacting protein 11##NM_001008697|TFIP11|24144|tuftelin interacting protein 11##NM_012143|TFIP11|24144|tuftelin interacting protein 11##AK298303|TFIP11|24144|tuftelin interacting protein 11##AL050258|TFIP11|24144|tuftelin interacting protein 11##AK075139|TPST2|8459|tyrosylprotein sulfotransferase 2##NM_001008566|TPST2|8459|tyrosylprotein sulfotransferase 2	0.973215	CTCF.p2:-4:0.973
chr22	39264975	39265099	reg1010716.p1	10.801	+	NM_014293 TSC_hg19_v1_chr22_-_39240034	-24994	-	TSC_hg19_v1_chr22_-_39239733 AB527378	-25256	-	TSC_hg19_v1_chr22_-_39190149 AK223349 AK289744 AL035366 NM_005740	-74862	-	TSC_hg19_v1_chr22_-_39268213 CU680218 CU687960 DQ893667 DQ895787 BC064900	3154	-	TSC_hg19_v1_chr22_-_39268222 BC012111 AK293035	3184	-	TSC_hg19_v1_chr22_-_39268255 AK094829 NM_014292	3267	-	NM_014293|NPTXR|23467|neuronal pentraxin receptor##AK223349|DNAL4|10126|dynein, axonemal, light chain 4##AL035366|DNAL4|10126|dynein, axonemal, light chain 4##NM_005740|DNAL4|10126|dynein, axonemal, light chain 4##DQ893667|CBX6|23466|chromobox homolog 6##DQ895787|CBX6|23466|chromobox homolog 6##BC064900|CBX6|23466|chromobox homolog 6##BC012111|CBX6|23466|chromobox homolog 6##AK293035|CBX6|23466|chromobox homolog 6##AK094829|CBX6|23466|chromobox homolog 6##NM_014292|CBX6|23466|chromobox homolog 6	0.999677	CTCF.p2:2:1.000
chr8	122261143	122261283	reg1012268.p1	10.801	+	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-436707	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-436943	-	TSC_hg19_v1_chr8_-_121824090 AB590740	-437150	-	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	392413	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	1532698	+	BC042145 TSC_hg19_v1_chr8_+_123794000	1532781	+	NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2	0.998578	CTCF.p2:0:0.999
chr10	125140338	125140493	reg1011896.p1	10.800	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-226059	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-226469	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-226517	+	AJ505757 NM_153442 BC112011 BC113462	285462	+	BC137492 BC146862 AY358565 NM_198148	511081	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	711484	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.931874	CTCF.p2:7:0.932
chr9	115205630	115205735	reg1008948.p1	10.800	+	TSC_hg19_v1_chr9_+_115142411 BC095451 CU678670	-63264	+	NM_001195822 NM_032303 AK098721 TSC_hg19_v1_chr9_+_115142387 AY093428 BC004331 AK289929 AK292486 AK313605 AK225946 AK303645 AK301469	-63392	+	TSC_hg19_v1_chr9_-_115095957 NM_001163788 NM_001163790 NM_001244896 NM_001244897 NM_005156	-109709	-	TSC_hg19_v1_chr9_+_115249149 AK096613 NM_133465	43480	+	BC105048 BC113515 BC143372 BC143424 TSC_hg19_v1_chr9_+_115249466	43730	+	TSC_hg19_v1_chr9_+_115336888 AK056181	131248	+	BC095451|HSDL2|84263|hydroxysteroid dehydrogenase like 2##NM_001195822|HSDL2|84263|hydroxysteroid dehydrogenase like 2##NM_032303|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK098721|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AY093428|HSDL2|84263|hydroxysteroid dehydrogenase like 2##BC004331|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK289929|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK292486|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK313605|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK225946|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK303645|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK301469|HSDL2|84263|hydroxysteroid dehydrogenase like 2##NM_001163788|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001163790|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244896|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244897|PTBP3|9991|polypyrimidine tract binding protein 3##NM_005156|PTBP3|9991|polypyrimidine tract binding protein 3##AK096613|KIAA1958|158405|KIAA1958##NM_133465|KIAA1958|158405|KIAA1958##BC105048|KIAA1958|158405|KIAA1958##BC113515|KIAA1958|158405|KIAA1958##BC143372|KIAA1958|158405|KIAA1958##BC143424|KIAA1958|158405|KIAA1958##AK056181|KIAA1958|158405|KIAA1958	0.99894	CTCF.p2:6:0.999
chr2	30295244	30295370	reg1011639.p1	10.799	+	EU788003 EU788004 EU788005 EU788006 EU788007 EU788008 EU788009 EU788010 FJ838786 FJ838787 U62540 TSC_hg19_v1_chr2_-_30144453 AK296218 NM_004304	-150853	-	TSC_hg19_v1_chr2_+_29338370 BC013862 NM_024692 AL834443	-956952	+	NM_001029883	-998181	-	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	74463	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	74526	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	74569	+	EU788003|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788004|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788005|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788006|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788007|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788008|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788009|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788010|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838786|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838787|ALK|238|anaplastic lymphoma receptor tyrosine kinase##U62540|ALK|238|anaplastic lymphoma receptor tyrosine kinase##AK296218|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_004304|ALK|238|anaplastic lymphoma receptor tyrosine kinase##BC013862|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_024692|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##AL834443|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)	0.295077	CTCF.p2:4:0.295
chrX	120713001	120713129	reg1010565.p1	10.799	+	TSC_hg19_v1_chrX_+_120181464 BC050732 NM_012084 AK313356	-531625	+	BC029540 NM_001080141 NM_001080146	-593428	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080141 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	-598288	-	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	1605175	+	TSC_hg19_v1_chrX_-_122866885 AK001758	2153818	-	TSC_hg19_v1_chrX_-_122866897 NM_001081550	2153832	-	BC050732|GLUD2|2747|glutamate dehydrogenase 2##NM_012084|GLUD2|2747|glutamate dehydrogenase 2##AK313356|GLUD2|2747|glutamate dehydrogenase 2##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##AK001758|THOC2|57187|THO complex 2##NM_001081550|THOC2|57187|THO complex 2	0.355552	CTCF.p2:3:0.356
chr15	56783461	56783583	reg1009778.p1	10.798	+	TSC_hg19_v1_chr15_-_56757262 BC031046 AK310029 BC012554 BC034991 AK002084 NM_018365	-26236	-	TSC_hg19_v1_chr15_+_56657623 AK294960 BC028119 NM_198524 AL832050	-125893	+	TSC_hg19_v1_chr15_-_56535479 NM_022841	-248040	-	TSC_hg19_v1_chr15_-_57025690 AB046804 BC053649 BC064359 AK310882 AK289739 BC130451 BC136412	242190	-	TSC_hg19_v1_chr15_-_57025818 BX641000 BX640707 NM_001002843 NM_001002844 NM_017661 AK295159	242310	-	TSC_hg19_v1_chr15_-_57210733 AK096657 BC036541	427214	-	BC031046|MNS1|55329|meiosis-specific nuclear structural 1##BC012554|MNS1|55329|meiosis-specific nuclear structural 1##BC034991|MNS1|55329|meiosis-specific nuclear structural 1##AK002084|MNS1|55329|meiosis-specific nuclear structural 1##NM_018365|MNS1|55329|meiosis-specific nuclear structural 1##AK294960|TEX9|374618|testis expressed 9##BC028119|TEX9|374618|testis expressed 9##NM_198524|TEX9|374618|testis expressed 9##AL832050|TEX9|374618|testis expressed 9##NM_022841|RFX7|64864|regulatory factor X, 7##AB046804|ZNF280D|54816|zinc finger protein 280D##BC053649|ZNF280D|54816|zinc finger protein 280D##BC064359|ZNF280D|54816|zinc finger protein 280D##AK310882|ZNF280D|54816|zinc finger protein 280D##AK289739|ZNF280D|54816|zinc finger protein 280D##BC130451|ZNF280D|54816|zinc finger protein 280D##BC136412|ZNF280D|54816|zinc finger protein 280D##BX641000|ZNF280D|54816|zinc finger protein 280D##BX640707|ZNF280D|54816|zinc finger protein 280D##NM_001002843|ZNF280D|54816|zinc finger protein 280D##NM_001002844|ZNF280D|54816|zinc finger protein 280D##NM_017661|ZNF280D|54816|zinc finger protein 280D##AK295159|ZNF280D|54816|zinc finger protein 280D##AK096657|LOC145783|145783|uncharacterized LOC145783	0.993497	CTCF.p2:-3:0.993
chr15	74667689	74667807	reg1009141.p2	10.798	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-7745	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-9213	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-56843	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	58281	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	58564	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	85699	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.99741	CTCF.p2:0:0.997
chr20	5509683	5509797	reg1007765.p1	10.798	+	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-214704	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-402045	+	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	-402218	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	81847	-	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	221326	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	382386	+	AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)	0.997027	CTCF.p2:-19:0.997
chr19	47747556	47747696	reg1008198.p1	10.797	+	AB590880 AK298837 AF354654 AF354655 AF354656 NM_001127240 NM_001127241 NM_001127242	-11686	-	U82987 BC136481 TSC_hg19_v1_chr19_-_47734457 AF332558 NM_014417	-13281	-	TSC_hg19_v1_chr19_+_47634184 AB385085 DQ891751 DQ894932 CU676224 AF110956 BT007290	-113404	+	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	12135	+	TSC_hg19_v1_chr19_+_47759811 BC002787 BC009743	12192	+	TSC_hg19_v1_chr19_+_47778141 BC022076 BC045749 NM_178511 BC064510	30510	+	AK298837|BBC3|27113|BCL2 binding component 3##AF354654|BBC3|27113|BCL2 binding component 3##AF354655|BBC3|27113|BCL2 binding component 3##AF354656|BBC3|27113|BCL2 binding component 3##NM_001127240|BBC3|27113|BCL2 binding component 3##NM_001127241|BBC3|27113|BCL2 binding component 3##NM_001127242|BBC3|27113|BCL2 binding component 3##U82987|BBC3|27113|BCL2 binding component 3##BC136481|BBC3|27113|BCL2 binding component 3##AF332558|BBC3|27113|BCL2 binding component 3##NM_014417|BBC3|27113|BCL2 binding component 3##DQ891751|SAE1|10055|SUMO1 activating enzyme subunit 1##DQ894932|SAE1|10055|SUMO1 activating enzyme subunit 1##AF110956|SAE1|10055|SUMO1 activating enzyme subunit 1##BT007290|SAE1|10055|SUMO1 activating enzyme subunit 1##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9##BC002787|CCDC9|26093|coiled-coil domain containing 9##BC009743|CCDC9|26093|coiled-coil domain containing 9##BC022076|PRR24|255783|proline rich 24##BC045749|PRR24|255783|proline rich 24##NM_178511|PRR24|255783|proline rich 24##BC064510|PRR24|255783|proline rich 24	0.323212	CTCF.p2:26:0.323
chr2	38118209	38118344	reg1010072.p1	10.797	+	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	-218887	-	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	-219497	-	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-546463	+	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	34156	+	BC024243 NM_001170792	37625	+	NM_001170793 NM_144713 AK057516 AF435956	59324	+	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1##BC024243|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1	0.999689	CTCF.p2:-12:1.000
chr18	23963790	23963917	reg1008967.p1	10.796	+	TSC_hg19_v1_chr18_+_23806444 NM_005640 AB234096	-157436	+	BC042820 NM_001025096 NM_001025097 NM_144662 BC025393 BC028371 BC028686 BC025389 BC047355 BC021713	-250005	+	AB527567 EU832762 GQ129305 AB300354 AB300355 AB300356 AB300357 AF230662 AF244972 AF257500 AF343880 BC096221 BC096222 BC096223 BC096224 CR542088 CR542103 X79201 TSC_hg19_v1_chr18_-_23670574 AK304305 AK316302 AK316338 AK299082 AK307923 AK289510 NM_001007559 NM_005637 AK301504	-293273	-	NM_001142730 TSC_hg19_v1_chr18_-_24128518	164657	-	AK289870 BC063652 TSC_hg19_v1_chr18_-_24129261 NM_001136205	165388	-	AF542549 NM_198991	256454	-	NM_005640|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##AB234096|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##EU832762|SS18|6760|synovial sarcoma translocation, chromosome 18##GQ129305|SS18|6760|synovial sarcoma translocation, chromosome 18##AF244972|SS18|6760|synovial sarcoma translocation, chromosome 18##AF343880|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096221|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096222|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096223|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096224|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542088|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542103|SS18|6760|synovial sarcoma translocation, chromosome 18##X79201|SS18|6760|synovial sarcoma translocation, chromosome 18##AK304305|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316302|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316338|SS18|6760|synovial sarcoma translocation, chromosome 18##AK299082|SS18|6760|synovial sarcoma translocation, chromosome 18##AK307923|SS18|6760|synovial sarcoma translocation, chromosome 18##AK289510|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001007559|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_005637|SS18|6760|synovial sarcoma translocation, chromosome 18##AK301504|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1##AK289870|KCTD1|284252|potassium channel tetramerisation domain containing 1##BC063652|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001136205|KCTD1|284252|potassium channel tetramerisation domain containing 1##AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1	0.999858	CTCF.p2:-8:1.000
chr18	2994663	2994790	reg1009488.p1	10.796	+	AB026706 TSC_hg19_v1_chr18_+_2907037	-87725	+	TSC_hg19_v1_chr18_+_2847006 AF270513 NM_032048 BC032231 BC136541	-147695	+	BC006008 NM_015295 TSC_hg19_v1_chr18_+_2655885	-338812	+	BC152448 D87436 NM_014646	17218	-	BC116183 BC116184 TSC_hg19_v1_chr18_-_3219875	225134	-	TSC_hg19_v1_chr18_-_3219987 AJ621424 AK125322 NM_003803 NM_019856	225319	-	AB026706|EMILIN2|84034|elastin microfibril interfacer 2##AF270513|EMILIN2|84034|elastin microfibril interfacer 2##NM_032048|EMILIN2|84034|elastin microfibril interfacer 2##BC032231|EMILIN2|84034|elastin microfibril interfacer 2##BC136541|EMILIN2|84034|elastin microfibril interfacer 2##BC006008|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##NM_015295|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##BC152448|LPIN2|9663|lipin 2##D87436|LPIN2|9663|lipin 2##NM_014646|LPIN2|9663|lipin 2##BC116183|MYOM1|8736|myomesin 1, 185kDa##BC116184|MYOM1|8736|myomesin 1, 185kDa##AJ621424|MYOM1|8736|myomesin 1, 185kDa##AK125322|MYOM1|8736|myomesin 1, 185kDa##NM_003803|MYOM1|8736|myomesin 1, 185kDa##NM_019856|MYOM1|8736|myomesin 1, 185kDa	0.928592	CTCF.p2:-2:0.929
chr19	18390344	18390457	reg1008567.p1	10.796	+	AK057466 AK302431 AL136867 BC112932 NM_001145304 NM_001145305 NM_025249	-5158	-	NM_000923 U66346	-31391	-	AK300888 AK300983 TSC_hg19_v1_chr19_-_18337249 NM_001098818 U88713	-53141	-	TSC_hg19_v1_chr19_+_18391286 AB593186	881	+	BC169275 TSC_hg19_v1_chr19_-_18391478	1059	-	BC169273 TSC_hg19_v1_chr19_-_18392160 X51346	1705	-	AK057466|KIAA1683|80726|KIAA1683##AK302431|KIAA1683|80726|KIAA1683##AL136867|KIAA1683|80726|KIAA1683##BC112932|KIAA1683|80726|KIAA1683##NM_001145304|KIAA1683|80726|KIAA1683##NM_001145305|KIAA1683|80726|KIAA1683##NM_025249|KIAA1683|80726|KIAA1683##NM_000923|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U66346|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK300888|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK300983|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##NM_001098818|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U88713|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##BC169273|JUND|3727|jun D proto-oncogene##X51346|JUND|3727|jun D proto-oncogene	0.050292	
chr3	27353704	27353842	reg1009126.p2	10.796	+	BC067784 TSC_hg19_v1_chr3_+_26664296 AF396933 NM_052953	-689473	+	TSC_hg19_v1_chr3_+_25831590 NM_001145391 NM_017897 AK000611 AK304821 AK225260 BC008202	-1522193	+	AK296047 NM_001145294	-1522261	-	TSC_hg19_v1_chr3_-_27410884 AK123061 NM_199347	57140	-	AF047033 AF089726 NM_003615	144471	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	172052	-	BC067784|LRRC3B|116135|leucine rich repeat containing 3B##AF396933|LRRC3B|116135|leucine rich repeat containing 3B##NM_052953|LRRC3B|116135|leucine rich repeat containing 3B##NM_001145391|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##NM_017897|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK000611|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK304821|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK225260|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##BC008202|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK296047|NGLY1|55768|N-glycanase 1##NM_001145294|NGLY1|55768|N-glycanase 1##AK123061|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##NM_199347|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7	0.234493	CTCF.p2:-9:0.234
chr17	38358181	38358285	reg1008751.p1	10.795	+	NM_016339	-23992	+	TSC_hg19_v1_chr17_+_38296796 CU690706	-61437	+	TSC_hg19_v1_chr17_+_38296779 BC030008	-61456	+	TSC_hg19_v1_chr17_+_38375614 AK289779 AK311544 AL834239 NM_133264 BC025965 AK315836 AK055057 AK290301 BC065551 AF370396	17381	+	AK313620 TSC_hg19_v1_chr17_+_38444130	85897	+	TSC_hg19_v1_chr17_+_38444134 NM_001254 U77949	85907	+	NM_016339|RAPGEFL1|51195|Rap guanine nucleotide exchange factor (GEF)-like 1##BC030008|CASC3|22794|cancer susceptibility candidate 3##AK289779|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK311544|WIPF2|147179|WAS/WASL interacting protein family, member 2##AL834239|WIPF2|147179|WAS/WASL interacting protein family, member 2##NM_133264|WIPF2|147179|WAS/WASL interacting protein family, member 2##BC025965|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK315836|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK055057|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK290301|WIPF2|147179|WAS/WASL interacting protein family, member 2##BC065551|WIPF2|147179|WAS/WASL interacting protein family, member 2##AF370396|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK313620|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##NM_001254|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##U77949|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)	0.841739	CTCF.p2:-1:0.842
chrX	57480539	57480646	reg1008773.p1	10.795	+	NM_174912 AK055766 BC073922 TSC_hg19_v1_chrX_+_57313185 CU687272 EU285560 BC048279	-167377	+	BC071694 NM_019003	-316535	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	-332664	-	NM_007157	137676	+	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	137868	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	456367	-	NM_174912|FAAH2|158584|fatty acid amide hydrolase 2##AK055766|FAAH2|158584|fatty acid amide hydrolase 2##BC073922|FAAH2|158584|fatty acid amide hydrolase 2##EU285560|FAAH2|158584|fatty acid amide hydrolase 2##BC048279|FAAH2|158584|fatty acid amide hydrolase 2##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A	0.941173	CTCF.p2:13:0.941
chr14	25179741	25179872	reg1009372.p2	10.794	+	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-76388	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-100945	-	AB590242 CR456807 CR541704 DQ893067 DQ896320 M16117 TSC_hg19_v1_chr14_-_25045457 AK225914 BC014460 NM_001911	-134360	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	339432	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1887182	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	4056422	+	AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##CR456807|CTSG|1511|cathepsin G##CR541704|CTSG|1511|cathepsin G##DQ893067|CTSG|1511|cathepsin G##DQ896320|CTSG|1511|cathepsin G##M16117|CTSG|1511|cathepsin G##AK225914|CTSG|1511|cathepsin G##BC014460|CTSG|1511|cathepsin G##NM_001911|CTSG|1511|cathepsin G##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1	0.997106	CTCF.p2:-6:0.997
chr3	158445688	158445791	reg1010013.p1	10.794	+	CU678961 EU831968 EU832061 AF087851 AF282594 AF282626 BC008438 BC005346 NM_020169	-55366	-	TSC_hg19_v1_chr3_+_158362392 CU690604	-83323	+	TSC_hg19_v1_chr3_+_158362373 AK315031	-83358	+	DQ891333 DQ893367 DQ894516 DQ896684 BC029640 TSC_hg19_v1_chr3_-_158450211	4469	-	U27185 AK130079 TSC_hg19_v1_chr3_-_158450247	4502	-	TSC_hg19_v1_chr3_-_158450277 NM_002888 NM_206963	4541	-	EU831968|LXN|56925|latexin##EU832061|LXN|56925|latexin##AF087851|LXN|56925|latexin##AF282594|LXN|56925|latexin##AF282626|LXN|56925|latexin##BC008438|LXN|56925|latexin##BC005346|LXN|56925|latexin##NM_020169|LXN|56925|latexin##AK315031|GFM1|85476|G elongation factor, mitochondrial 1##DQ891333|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ893367|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ894516|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ896684|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##BC029640|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##U27185|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##AK130079|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##NM_002888|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##NM_206963|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1	0.999174	CTCF.p2:-2:0.999
chr17	44080013	44080131	reg1009046.p1	10.793	+	BC130319 BC130321 NM_001007532 AY179170	-3442	+	TSC_hg19_v1_chr17_+_44068829 AY526356	-11238	+	TSC_hg19_v1_chr17_+_43972018 J03778	-108048	+	TSC_hg19_v1_chr17_+_44101553 AB073354	21498	+	TSC_hg19_v1_chr17_-_44270149 BX538006 NM_001193466	190082	-	TSC_hg19_v1_chr17_-_44270338 BC098376 NM_015443	190237	-	BC130319|STH|246744|saitohin##BC130321|STH|246744|saitohin##NM_001007532|STH|246744|saitohin##AY179170|STH|246744|saitohin##AY526356|MAPT|4137|microtubule-associated protein tau##J03778|MAPT|4137|microtubule-associated protein tau##AB073354|MAPT|4137|microtubule-associated protein tau##BX538006|KIAA1267|284058|KIAA1267##NM_001193466|KIAA1267|284058|KIAA1267##BC098376|KIAA1267|284058|KIAA1267##NM_015443|KIAA1267|284058|KIAA1267	0.998858	CTCF.p2:1:0.999
chr1	93434126	93434241	reg1008933.p1	10.793	+	TSC_hg19_v1_chr1_-_93427020 BC070342 NM_001006605 NM_001252269 NM_001252270 NM_001252273	-7145	-	TSC_hg19_v1_chr1_-_93399531 BX648424	-34591	-	NM_001252271	-91477	-	TSC_hg19_v1_chr1_+_93544836 NM_001164391 NM_001164392 NM_001164393 NM_007358 AK290318 AK302900 AJ010014 AK302776 AF086908 BC010013 BC001897	110650	+	AY359039 BC016556 AF151858 TSC_hg19_v1_chr1_-_93645971 AK293308 BC016365 AK312787 CR936808 AK125882	211804	-	BC070051 NM_001167830 NM_016040	212062	-	BC070342|FAM69A|388650|family with sequence similarity 69, member A##NM_001006605|FAM69A|388650|family with sequence similarity 69, member A##NM_001252269|FAM69A|388650|family with sequence similarity 69, member A##NM_001252270|FAM69A|388650|family with sequence similarity 69, member A##NM_001252273|FAM69A|388650|family with sequence similarity 69, member A##NM_001252271|FAM69A|388650|family with sequence similarity 69, member A##NM_001164391|MTF2|22823|metal response element binding transcription factor 2##NM_001164392|MTF2|22823|metal response element binding transcription factor 2##NM_001164393|MTF2|22823|metal response element binding transcription factor 2##NM_007358|MTF2|22823|metal response element binding transcription factor 2##AK290318|MTF2|22823|metal response element binding transcription factor 2##AK302900|MTF2|22823|metal response element binding transcription factor 2##AJ010014|MTF2|22823|metal response element binding transcription factor 2##AK302776|MTF2|22823|metal response element binding transcription factor 2##AF086908|MTF2|22823|metal response element binding transcription factor 2##BC010013|MTF2|22823|metal response element binding transcription factor 2##BC001897|MTF2|22823|metal response element binding transcription factor 2##AY359039|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016556|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AF151858|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK293308|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016365|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK312787|TMED5|50999|transmembrane emp24 protein transport domain containing 5##CR936808|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK125882|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC070051|TMED5|50999|transmembrane emp24 protein transport domain containing 5##NM_001167830|TMED5|50999|transmembrane emp24 protein transport domain containing 5##NM_016040|TMED5|50999|transmembrane emp24 protein transport domain containing 5	0.929261	CTCF.p2:5:0.929
chr3	141089060	141089180	reg1008022.p1	10.793	+	TSC_hg19_v1_chr3_+_141087345 AK311501	-1763	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	-46064	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	-138434	+	AK311479 TSC_hg19_v1_chr3_+_141105293	16168	+	TSC_hg19_v1_chr3_+_141205882 AK292016 AK301015 AF115573 D78155 D82880 NM_006506	116751	+	TSC_hg19_v1_chr3_+_141457045 NM_001201370 NM_014245 NM_183237	367949	+	AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2##AK292016|RASA2|5922|RAS p21 protein activator 2##AK301015|RASA2|5922|RAS p21 protein activator 2##AF115573|RASA2|5922|RAS p21 protein activator 2##D78155|RASA2|5922|RAS p21 protein activator 2##D82880|RASA2|5922|RAS p21 protein activator 2##NM_006506|RASA2|5922|RAS p21 protein activator 2##NM_001201370|RNF7|9616|ring finger protein 7##NM_014245|RNF7|9616|ring finger protein 7##NM_183237|RNF7|9616|ring finger protein 7	0.0	
chr7	23978681	23978815	reg1011892.p1	10.793	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-228832	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	-258925	+	TSC_hg19_v1_chr7_+_23637005 NM_138771 AK289911 AY358713 AX721042	-341733	+	BC029497 NM_000905 AK312156 K01911 M15789	345095	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	634340	+	TSC_hg19_v1_chr7_-_24797042 BC099911	818289	-	AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##NM_138771|CCDC126|90693|coiled-coil domain containing 126##AK289911|CCDC126|90693|coiled-coil domain containing 126##AY358713|CCDC126|90693|coiled-coil domain containing 126##BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC099911|DFNA5|1687|deafness, autosomal dominant 5	0.486308	CTCF.p2:-4:0.486
chr9	136398302	136398438	reg1009751.p1	10.793	+	AB011177 NM_001145320	-1085	+	NM_001080483	-8303	-	DQ891513 DQ894704 AK294974 BC013740 TSC_hg19_v1_chr9_-_136344222 AJ011372 AK225106 AK222919 AK074836 AK096630 Y17803 AK074927 NM_001145099 NM_017585	-54142	-	TSC_hg19_v1_chr9_+_136399879 BC050544 NM_014694	1555	+	AB528863 BC146946 BC146961 NM_001080515	46985	-	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	103138	+	AB011177|ADAMTSL2|9719|ADAMTS-like 2##NM_001145320|ADAMTSL2|9719|ADAMTS-like 2##NM_001080483|TMEM8C|389827|transmembrane protein 8C##DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##BC050544|ADAMTSL2|9719|ADAMTS-like 2##NM_014694|ADAMTSL2|9719|ADAMTS-like 2##BC146946|FAM163B|642968|family with sequence similarity 163, member B##BC146961|FAM163B|642968|family with sequence similarity 163, member B##NM_001080515|FAM163B|642968|family with sequence similarity 163, member B##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)	0.233347	CTCF.p2:-3:0.233
chr6	119432002	119432132	reg1011560.p1	10.792	+	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-32159	-	CU687406 AB385245 EU832813 GQ129264 TSC_hg19_v1_chr6_-_119399478	-32643	-	TSC_hg19_v1_chr6_-_119256325 NM_153255	-175740	-	BX538186 AK091682 AX747126 NM_001100411	38279	-	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	238854	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	2223576	-	BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##EU832813|FAM184A|79632|family with sequence similarity 184, member A##GQ129264|FAM184A|79632|family with sequence similarity 184, member A##NM_153255|MCM9|254394|minichromosome maintenance complex component 9##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170	0.946316	CTCF.p2:28:0.946
chr7	89891870	89891982	reg1009118.p2	10.792	+	NM_001039706 NM_001160138 AK093991 AK303034 AX748399 BC036351 AK302636 BC141834 BC142655 BC140742 AY349356	-17314	+	AF526382 AY358267 NM_001040666	-48793	+	AF455138 NM_001244944 NM_001244945 NM_152999 AK092666 AX747660 TSC_hg19_v1_chr7_+_89841171 AY008443 AY008444 AY008445 NM_001040665 NM_001244946 AK315043	-50811	+	TSC_hg19_v1_chr7_+_89976015 AF351613 NM_001042717 NM_033107 AK095561 BC107714 CR933597 AK294325 BC144162	84078	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	140778	+	TSC_hg19_v1_chr7_+_90032774 AL136770 BC016061	140878	+	NM_001039706|C7orf63|79846|chromosome 7 open reading frame 63##NM_001160138|C7orf63|79846|chromosome 7 open reading frame 63##AK093991|C7orf63|79846|chromosome 7 open reading frame 63##AK303034|C7orf63|79846|chromosome 7 open reading frame 63##BC036351|C7orf63|79846|chromosome 7 open reading frame 63##AK302636|C7orf63|79846|chromosome 7 open reading frame 63##BC141834|C7orf63|79846|chromosome 7 open reading frame 63##BC142655|C7orf63|79846|chromosome 7 open reading frame 63##BC140742|C7orf63|79846|chromosome 7 open reading frame 63##AY349356|C7orf63|79846|chromosome 7 open reading frame 63##AF526382|STEAP2|261729|STEAP family member 2, metalloreductase##AY358267|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040666|STEAP2|261729|STEAP family member 2, metalloreductase##AF455138|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244944|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244945|STEAP2|261729|STEAP family member 2, metalloreductase##NM_152999|STEAP2|261729|STEAP family member 2, metalloreductase##AK092666|STEAP2|261729|STEAP family member 2, metalloreductase##AY008443|STEAP2|261729|STEAP family member 2, metalloreductase##AY008444|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040665|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244946|STEAP2|261729|STEAP family member 2, metalloreductase##AK315043|STEAP2|261729|STEAP family member 2, metalloreductase##AF351613|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001042717|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_033107|GTPBP10|85865|GTP-binding protein 10 (putative)##AK095561|GTPBP10|85865|GTP-binding protein 10 (putative)##BC107714|GTPBP10|85865|GTP-binding protein 10 (putative)##CR933597|GTPBP10|85865|GTP-binding protein 10 (putative)##AK294325|GTPBP10|85865|GTP-binding protein 10 (putative)##BC144162|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12##AL136770|CLDN12|9069|claudin 12	0.854828	CTCF.p2:21:0.855
chr10	113900005	113900152	reg1009653.p1	10.791	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	-1063226	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-1220698	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-1220718	+	AB046780 TSC_hg19_v1_chr10_-_113933602	33483	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	43427	-	BC113497 BC113499 AF312827 HQ258194 NM_058222	143374	+	NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta	0.998969	CTCF.p2:27:0.999
chr1	165042759	165042881	reg1009646.p1	10.791	+	TSC_hg19_v1_chr1_+_164818083 AK022520	-224697	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	-513834	+	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	-514229	+	AK122800 NM_001174069	282655	-	AK127724 NM_177398	283131	-	AB593016 AK312922 NM_006917	371725	-	AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AB593016|RXRG|6258|retinoid X receptor, gamma##AK312922|RXRG|6258|retinoid X receptor, gamma##NM_006917|RXRG|6258|retinoid X receptor, gamma	0.32707	CTCF.p2:13:0.327
chr8	27062637	27062759	reg1012057.p1	10.791	+	TSC_hg19_v1_chr8_-_26724764 AK289548	-337940	-	AK311558 TSC_hg19_v1_chr8_-_26724735	-337964	-	U02569 AY491775 AY491776 AY491777 AY491778 AY491779 AY491780 AY491781 D25235 D32201 D32202 NM_000680 NM_033302 NM_033303 NM_033304	-339780	-	AB527631 CU679938 DQ891040 DQ894219 TSC_hg19_v1_chr8_-_27101279 AJ303455	38580	-	TSC_hg19_v1_chr8_-_27115922 BC011520 NM_030795 BC111001 AK295329 AK225142 AK294023 AK309207 AL136568	53214	-	TSC_hg19_v1_chr8_-_27115938 AK297415	53259	-	AK289548|ADRA1A|148|adrenergic, alpha-1A-, receptor##U02569|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491775|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491776|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491777|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491778|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491780|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491781|ADRA1A|148|adrenergic, alpha-1A-, receptor##D25235|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32201|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32202|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_000680|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033302|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033303|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033304|ADRA1A|148|adrenergic, alpha-1A-, receptor##DQ891040|STMN4|81551|stathmin-like 4##DQ894219|STMN4|81551|stathmin-like 4##AJ303455|STMN4|81551|stathmin-like 4##BC011520|STMN4|81551|stathmin-like 4##NM_030795|STMN4|81551|stathmin-like 4##BC111001|STMN4|81551|stathmin-like 4##AK295329|STMN4|81551|stathmin-like 4##AK225142|STMN4|81551|stathmin-like 4##AK294023|STMN4|81551|stathmin-like 4##AK309207|STMN4|81551|stathmin-like 4##AL136568|STMN4|81551|stathmin-like 4##AK297415|STMN4|81551|stathmin-like 4	0.998766	CTCF.p2:5:0.999
chr1	153483522	153483630	reg1009086.p1	10.790	+	BC034687 M86757 NM_002963	-50456	-	NM_001045479	-71074	-	AY189118 NM_176823	-94577	+	TSC_hg19_v1_chr1_-_153508468 AK312088 D28464	24889	-	TSC_hg19_v1_chr1_-_153508522 BC001431	24956	-	TSC_hg19_v1_chr1_-_153508622 BC009017 NM_014624	25080	-	BC034687|S100A7|6278|S100 calcium binding protein A7##M86757|S100A7|6278|S100 calcium binding protein A7##NM_002963|S100A7|6278|S100 calcium binding protein A7##NM_001045479|S100A7L2|645922|S100 calcium binding protein A7-like 2##AY189118|S100A7A|338324|S100 calcium binding protein A7A##NM_176823|S100A7A|338324|S100 calcium binding protein A7A##AK312088|S100A6|6277|S100 calcium binding protein A6##D28464|S100A6|6277|S100 calcium binding protein A6##BC001431|S100A6|6277|S100 calcium binding protein A6##BC009017|S100A6|6277|S100 calcium binding protein A6##NM_014624|S100A6|6277|S100 calcium binding protein A6	0.527984	CTCF.p2:-5:0.449
chr1	169680808	169680951	reg1002173.p1	10.790	+	AB528958 CU676702 DQ891376 DQ894554 AJ246000 X16150 X17519 BC020758 X16070 AK225713 AK312673 M25280 TSC_hg19_v1_chr1_-_169680762 NM_000655	-120	-	M25322 AK312884 BC068533 NM_003005	-81517	-	TSC_hg19_v1_chr1_-_169555717 AK291613 AK300469 NM_000130	-125140	-	BC131551 M24736 M30640 BC142677 BC142711 AK314214 NM_000450 TSC_hg19_v1_chr1_-_169703221	22320	-	AL035369 NM_033418 AK313909	83153	-	TSC_hg19_v1_chr1_+_169764185 AK303296 BC011012 AK001568 BC091516 AK096493 AK310638 AK299369 EU832166 EU832260	83329	+	DQ891376|SELL|6402|selectin L##DQ894554|SELL|6402|selectin L##AJ246000|SELL|6402|selectin L##X16150|SELL|6402|selectin L##X17519|SELL|6402|selectin L##BC020758|SELL|6402|selectin L##X16070|SELL|6402|selectin L##AK225713|SELL|6402|selectin L##AK312673|SELL|6402|selectin L##M25280|SELL|6402|selectin L##NM_000655|SELL|6402|selectin L##M25322|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##AK312884|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##BC068533|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##NM_003005|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##AK291613|F5|2153|coagulation factor V (proaccelerin, labile factor)##AK300469|F5|2153|coagulation factor V (proaccelerin, labile factor)##NM_000130|F5|2153|coagulation factor V (proaccelerin, labile factor)##BC131551|SELE|6401|selectin E##M24736|SELE|6401|selectin E##M30640|SELE|6401|selectin E##BC142677|SELE|6401|selectin E##BC142711|SELE|6401|selectin E##AK314214|SELE|6401|selectin E##NM_000450|SELE|6401|selectin E##AL035369|METTL18|92342|methyltransferase like 18##NM_033418|METTL18|92342|methyltransferase like 18##AK313909|METTL18|92342|methyltransferase like 18##AK303296|C1orf112|55732|chromosome 1 open reading frame 112##BC011012|C1orf112|55732|chromosome 1 open reading frame 112##AK001568|C1orf112|55732|chromosome 1 open reading frame 112##BC091516|C1orf112|55732|chromosome 1 open reading frame 112##AK096493|C1orf112|55732|chromosome 1 open reading frame 112##AK310638|C1orf112|55732|chromosome 1 open reading frame 112##AK299369|C1orf112|55732|chromosome 1 open reading frame 112##EU832166|C1orf112|55732|chromosome 1 open reading frame 112##EU832260|C1orf112|55732|chromosome 1 open reading frame 112	0.0	
chr3	99405976	99406110	reg1011739.p1	10.790	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	-48593	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-785551	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-954456	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	130702	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	188948	-	BC017987 NM_001042459 NM_182909 AF329092 AX776292	427309	-	AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like	0.846074	CTCF.p2:-10:0.846
chr8	72732313	72732430	reg1009362.p2	10.790	+	BC035138 BC048982 TSC_hg19_v1_chr8_-_72459928	-272462	-	AJ000098 NM_000503 TSC_hg19_v1_chr8_-_72274481	-457896	-	TSC_hg19_v1_chr8_-_72274302 AK307379	-458078	-	TSC_hg19_v1_chr8_+_72756330 AK123315 BC094782	23903	+	TSC_hg19_v1_chr8_+_72756336 BX647470	23969	+	TSC_hg19_v1_chr8_-_72756449 AF087036 AB463900 BT007169	24068	-	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK123315|LOC100132891|100132891|uncharacterized LOC100132891##AF087036|MSC|9242|musculin##BT007169|MSC|9242|musculin	0.99913	CTCF.p2:-2:0.999
chr13	27521214	27521325	reg1009893.p1	10.789	+	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	-186416	-	TSC_hg19_v1_chr13_+_27131892 AF454702	-389367	+	TSC_hg19_v1_chr13_+_27131854 AK289845 BC050283 NM_006646	-389435	+	DQ894074 AF022789 TSC_hg19_v1_chr13_-_27745948 AK289685	224592	-	TSC_hg19_v1_chr13_-_27746003 BC026072 NM_182488	224817	-	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	304473	+	AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12##AF454702|WASF3|10810|WAS protein family, member 3##AK289845|WASF3|10810|WAS protein family, member 3##BC050283|WASF3|10810|WAS protein family, member 3##NM_006646|WASF3|10810|WAS protein family, member 3##DQ894074|USP12|219333|ubiquitin specific peptidase 12##AF022789|USP12|219333|ubiquitin specific peptidase 12##AK289685|USP12|219333|ubiquitin specific peptidase 12##BC026072|USP12|219333|ubiquitin specific peptidase 12##NM_182488|USP12|219333|ubiquitin specific peptidase 12##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21	0.700138	CTCF.p2:-1:0.700
chr14	106573093	106573217	reg1011186.p1	10.789	+	AF028100 AF460781 AF460830 DQ523918 DQ454686 DQ454784 AY003751 GQ232926 GQ232842 DQ454536 DQ454572 DQ454577 DQ523874 GU552698 DQ100996 AY003834 AY003866 DQ454881 DQ454918 GQ232935 GU552747 AY003780 DQ454841 DQ523891 FJ694882 FJ839966 FJ839976 FJ839978 FJ839985 FJ839992 FJ840024 FJ840027 FJ840030 FJ840039 FJ840068 FJ840074 FJ840076 FJ840077 FJ840081 FJ840084 FJ840087 FJ840121 FJ840122 FJ840152 FJ840211 FJ840345 FJ840372 FJ840374 FJ840382 FJ840393 FJ873873 FJ873898 FJ873903 FJ873918 FJ873976 FJ873981 FJ874020 FJ874039 FJ874070 AJ008190 AY003813 AY003814 EF175404 EF091903 EF091904 EF175384 EU350416 EU350417 AF035027 EU099275 EU099133 AM183981 AM183982 AM183983 HQ704031 HM774241 L04343 U63211 AF103184 FJ385385 HM774328 HM774349 HM774514 HM774642 HM774682 HM774840 HM774998 HQ704030 HQ704032 HQ704033 HQ704034 AF032360 HM774930 S56184 L03385 Y15773 AJ306670 AY376085 DQ926534 HM994910 HM995374 HM995381 AB063655 AB063669 AB063676 AB063796 AB063804 AB063927 AB066885 AB066886 AB066890 AB066980 AB066983 AB067006 AB067010 AB067016 AB067028 AB067069 AB067083 AB067103 AB067234 AB067266 AB363180 AF174058 AF174062 AJ306669 AJ309318 AM279602 AY376074 AY376080 AY944687 DQ100830 DQ100852 DQ100869 DQ100889 DQ100935 DQ926042 DQ926211 DQ926238 DQ926293 DQ926337 DQ926445 DQ926545 DQ926589 DQ926594 DQ926641 EF177963 EF177965 EU117415 FJ385303 FJ385304 FJ385360 FJ490203 GU570287 GU570291 GU570293 GU570294 HM994902 HM994970 HM994971 HM994973 HM994974 HM994975 HM994976 HM994999 HM995000 HM995001 HM995002 HM995003 HM995005 HM995006 HM995007 HM995008 HM995009 HM995010 HM995011 HM995229 HM995234 HM995240 HM995300 HM995301 HM995302 HM995303 HM995305 HM995350 HM995352 HM995354 HM995372 HM995378 HM995379 HM995382 HM995383 HM995384 HM995385 HM995386 HM995423 HM995430 HM995431 HM995449 HM995453 HM995454 HM995455 HM995458 HM995459 HM995507 HM995509 HM995510 HM995511 HM995575 HM995632 HM995835 HM995836 HM995838 HM995839 HM995840 HM995841 HM995954 HM996284 HM996494 HQ378378 U07985 Z18834 X98899 AB021529 AB021539 AF035796 AF471223 AF471224 AF471226 AF471227 AF471231 AF471235 AF471238 AF471239 AJ239353 AJ245321 AJ579149 AJ579153 AJ579156 AJ579215 AJ579229 AJ617571 AY379733 AY941939 D83676 D83677 DQ225095 DQ535264 DQ535301 DQ535363 DQ535409 DQ535438 DQ535483 EF633755 EF633756 EF633757 EF633758 EF633787 EF633789 EF633790 EF633816 EU835550 EU835551 GU570285 GU570286 HM152494 U00488 U00506 U00546 U00577 U00588 X62968 X62969 X63080 X64239 X73605 X79166 X99360 Z18318 Z33899 Z33901 Z14176 Z14171 AY994080 EU883655 DQ234395 DQ234396 DQ234397 DQ234398 DQ234399 DQ234401 EU883644 EU883645 EU883646 EU883647 EU883648 EU883649 EU883650 EU883651 EU883652 EU883653 EU883654 EU883656 EU883657 EU883658 EU883659 L23565 X53613 Z80840 CU675389 CU676902 BC021276 BC006402 TSC_hg19_v1_chr14_-_106552810 AK097367 AK123546 AK128565 AK128625 AK129508 BX640627	-20594	-	U49659 U32203 U32487 U32607 U32954 U33784 AF028116 AF267845 AJ437672 AJ437673 AJ437676 AJ437677 AY155561 AY155552 AY155553 AY155554 AY155555 AY155556 AY155558 AY155559 AY155560 DQ454893 DQ454501 DQ454556 AY003840 DQ454563 DQ454673 DQ454929 DQ454579 DQ454828 DQ523913 DQ454847 AF017458 FJ873972 FJ873986 HM995044 AJ487486 FJ694876 GQ232843 AF209886 AJ007327 AF209893 HQ392873 AF343406 AM279474 AM279478 AM279560 AM279563 AF308547 AF308555 HM773982 HM775023 AY515010 JN110874 L04323 HM774154 HM774400 HM774451 HM774458 HM774741 HM774744 HM774802 HM774806 HM775008 HM775009 HM775022 DQ097897 EU099249 AB067193 HM995129 AM183997 AY393237 AY393510 AY393524 AY193810 AY392846 AY392882 AY393110 AY393131 AY393136 AY393222 AY393234 AY393247 AY393248 AY393260 AY393499 AY393502 AY393529 AY393530 AY393534 AY393607 AY393631 AY393634 HM996282 HM996256 DQ100826 AF062290 DQ100689 DQ523985 EU620053 GU570225 HM995043 HM995045 HM995046 HM995047 HM995049 HM995050 HM995122 HM995127 HM995128 HM995148 HM995149 HM995150 HM995151 HM995152 HM995153 HM995154 HM995155 HM995208 HM995254 HM995311 HM995312 HM995363 HM995366 HM995694 HM995695 HM995698 HM995700 HM995703 HM995706 HM995708 HM995973 HM995974 HM995975 HM995976 HM995980 HM995983 HM995988 HM995989 HM995993 HM996202 HM996204 HM996241 HM996510 AB066887 AB067030 AB067098 AB067233 AF115112 AF115117 AF174060 AJ306682 AY376094 AY515000 DQ926131 DQ926568 DQ926621 EF178040 FJ195456 FJ195503 Z92895 Z92896 AB063690 AB063704 AB063736 AB066827 AB066831 AB066838 AB067161 AB067182 AB067304 AB067306 AB067324 AB289325 AB289327 AF021988 AF115130 AJ617574 AY640556 AY781858 AY971028 AY971058 AY971094 DQ005271 DQ100828 DQ100854 DQ205183 DQ535305 DQ768422 DQ926187 DQ926367 DQ926378 DQ926488 FJ385322 GU570224 HM152497 JN158499 M26435 U00547 U00560 U00561 Z18321 Z97032 DQ926181 DQ535306 DQ535339 EF178019 EF178022 FJ195500 FJ195523 L26892 HM995872 HM995895 HM995898 HM995899 AF062115 AF062177 AF062190 AF062211 AF062222 AF062223 AF062261 AF062263 AY392866 U43760 X65919 Z47216 Z47238 Z47240 BC067091 AF283666 BC075846 BC037361 Z14165 Z14166 Z14167 TSC_hg19_v1_chr14_-_106539571 AK097906 AK301334	-33816	-	AY035373 AY885209 AY885216 X61021 DQ454578 DQ523921 AF460677 AF460684 AF460701 AF460706 AF460802 DQ454428 GQ232803 GQ232912 GQ232954 GU552749 GQ232920 AY003818 AY003835 AY003844 AY003714 AY003809 DQ454647 DQ454454 DQ454471 DQ454492 DQ454915 GU552745 GU552756 GU552770 DQ454424 DQ454524 DQ454812 DQ454885 DQ454891 DQ454983 DQ454662 DQ454913 FJ840305 FJ840316 FJ873819 FJ873835 FJ873939 FJ873998 FJ874018 FJ874053 FJ874076 EU350415 AJ008237 AY003828 AJ487494 AJ487503 AY003805 DQ100698 EF175433 EF441757 EU814965 EU814969 DQ454482 EU099127 AM183996 HQ392896 AJ239383 AM279491 GQ903488 HM995750 AF103301 AF103037 AF103086 AF103146 AF165100 HM774111 AF103361 JN110905 HM775055 HM773993 FJ385329 HM774299 HM774454 HM774805 JN110797 JN111157 L04326 GQ504865 GQ504893 GQ504963 GQ504975 HM773970 HM774033 HM774184 HM774282 HM774312 HM774358 HM774362 HM774394 HM774602 HM774747 HM774807 HM774864 HM774872 HM774884 HM774902 HM774908 HM774914 HM774917 HM774979 HM774993 HM775020 HM775028 HQ703988 HQ704021 HQ704022 JN111201 DQ100741 HM775041 HM775050 S56604 AF103104 AF103221 AY866717 EF624097 EF624098 EF624099 EF624100 EF624101 EF624102 EF624103 EF624104 EF624105 EF624106 EF624107 EF624108 EF624109 EF624110 EF624111 EF624222 AJ300779 AJ300783 AJ300785 AY960861 DQ926366 AF001791 DQ100888 AF485461 AF485467 AF485475 AJ290433 AY376111 AF471523 AY423164 AY423165 AY423166 AY423167 AY423168 AY423196 AY423201 DQ100661 AJ556637 AY165857 AY885183 DQ109964 DQ109966 L37310 U00590 AF471185 AJ389182 AY866729 AY941943 DQ187554 DQ187558 DQ187672 GU570324 HM994886 HM995057 HM995131 HM995134 HM995135 HM995636 HM995660 HM995664 HM995773 HM995858 HM995860 HM996049 HM996147 HM996163 HM996317 HM996335 HM996371 HM996422 HM996433 HM996484 HM996538 U00584 DQ187677 DQ187708 DQ322751 DQ322797 DQ322802 DQ322804 DQ322860 DQ322861 DQ322862 DQ322863 DQ322864 DQ322865 DQ322866 DQ322867 DQ322894 DQ322895 DQ322896 DQ322897 DQ322905 DQ322906 DQ322909 DQ322910 DQ322922 DQ322957 DQ322958 DQ840698 DQ840723 DQ840725 DQ840754 DQ840755 DQ840757 DQ840759 DQ840761 DQ840762 DQ840763 DQ840764 DQ840765 DQ840767 DQ840768 DQ840779 DQ840854 DQ840860 DQ840862 DQ840867 DQ840872 DQ840875 DQ926106 HM996194 AF098360 AF115120 AF151699 AF151701 AF471405 AF471406 AF471470 AJ488539 AJ606116 AJ606117 AY530318 AY686908 DQ100752 DQ100787 DQ100790 DQ100827 DQ100850 DQ926039 DQ926040 DQ926061 DQ926074 DQ926108 DQ926127 DQ926145 DQ926175 DQ926381 DQ926443 DQ926559 DQ926611 EF177960 EF178018 EF178108 EU794412 FJ195533 FJ385315 HQ378333 HQ378408 L19913 X87893 X95740 Z18836 AB021510 AB021520 AB063665 AB063803 AB063812 AB063892 AB066987 AB067027 AB067099 AB067112 AB067123 AB067237 AB067268 AF021995 AF022001 AF052526 AF062119 AF062188 AF062241 AF109406 AF174118 AF408728 AF471169 AF471171 AF471172 AF471177 AF471179 AF471180 AF471181 AF471182 AF471184 AF471186 AF471189 AF471194 AF471195 AF471198 AF471199 AF471203 AF471204 AF471205 AF471208 AF471212 AF471214 AF471220 AF471386 AF471522 AF471527 AF471533 AF471543 AJ238036 AJ238038 AJ238040 AJ239359 AJ245208 AJ245317 AJ271601 AJ300781 AJ300786 AJ300796 AJ414013 AJ488543 AJ491910 AJ555273 AJ556638 AJ556640 AJ556645 AJ556649 AJ556658 AJ556659 AJ556660 AJ556664 AJ556667 AJ556668 AJ556669 AJ574777 AJ574779 AJ579141 AJ579162 AJ579198 AJ579216 AJ579217 AJ579233 AJ579234 AJ579239 AJ579269 AJ627231 AJ627236 AJ627237 AY033247 AY033256 AY033273 AY148344 AY281326 AY640478 AY685255 AY685317 AY955072 AY971017 AY971018 AY971074 AY971101 AY971123 DQ021409 DQ065716 DQ065724 DQ535273 DQ535337 DQ535344 DQ535374 DQ535415 DQ535435 DQ535457 DQ535480 DQ926153 DQ926159 DQ926221 DQ926410 DQ926544 DQ926553 DQ926573 DQ926614 EF177979 EF178025 EF178029 EF178039 EF178120 EF178121 EF178134 EF633799 EF633800 EU549723 EU794426 FJ385367 FJ481089 FJ492901 GQ856061 GQ903508 GQ903515 HM152524 HQ689704 JF806286 JF806288 JF806292 L39958 U00487 U00538 U03400 U76679 U85242 U85243 U96279 U96282 U96284 X62965 X99356 X99361 Z18822 Z95482 Z96960 Z96961 Z96962 Z96971 HM995657 AF283801 AJ249633 HM995748 HM995753 HM995770 HM995771 HM995772 HM995775 HM995873 Z14175 X69864 AY392917 AY393072 AY393151 AY393154 AY393160 X69863 X67908 Z14189 AF062138 AF062243 AF174030 AF174034 U79585 X59134 X65896 CU676308 BC041037 BC018747 BC062335 BC064496 TSC_hg19_v1_chr14_-_106518933 AK130614 AK097345 AK123975 AK126132 AK225676 BX640822	-54476	-	DQ454787 U64487 AF460704 AF460740 AF460807 DQ454554 AL389978 FJ385400 DQ454728 DQ454993 DQ454902 GQ232943 GU552699 AY003824 AY003849 DQ454431 EF566904 AY003777 DQ454493 DQ454848 GU552714 GU552717 DQ454498 DQ454515 DQ454965 DQ523862 EF407823 DQ454754 DQ454849 DQ454990 FJ840311 FJ840313 FJ840317 FJ840329 FJ840349 FJ873842 FJ873857 FJ873909 FJ873912 FJ873925 FJ874051 FJ874081 FJ874083 FJ874089 HM116118 AY003786 EU433870 EF175391 EF175399 EF175431 EF175439 EF441746 EU433865 EU667604 EU099143 EU099237 EU099244 EU099063 EU099194 EU099113 EU099200 AM183985 AM183986 EU099292 HQ392870 AF103124 DQ100718 AF103028 AF103040 AF103322 HM774410 L07309 L07310 L07312 JN110741 L03824 L03825 L04325 HM774027 HM774097 HM774142 HM774318 HM774446 HM774453 HM774557 HM774576 HM774604 HM774628 HM774645 HM774671 HM774698 HM774809 HM774847 HM774858 HM775011 HM775058 AF165102 HM775038 HM775039 HM775042 AF082199 EU146392 EU146393 EU146395 AY376083 AY376084 AF103217 AY485363 DQ100667 DQ926397 DQ926487 AF062294 DQ187521 DQ187649 DQ523968 DQ523986 DQ524059 DQ926170 DQ926613 GU570296 GU570301 HM995316 HM995318 HM995367 HM995592 HM995658 HM995661 HM995663 HM995671 HM995696 HM995697 HM995699 HM995792 HM995793 HM995795 HM995911 HM995912 HM995913 HM995914 HM995915 HM995916 HM995917 HM995918 HM996161 HM996278 DQ187668 DQ322752 DQ322795 DQ322799 DQ322834 DQ322835 DQ322836 DQ322837 DQ322838 DQ322839 DQ322840 DQ322841 DQ322842 DQ322843 DQ322847 DQ322848 DQ322849 DQ322850 DQ322851 DQ322852 DQ322853 DQ322854 DQ322907 DQ322908 DQ322924 DQ322985 DQ322986 DQ322987 DQ840668 DQ840696 DQ840724 DQ840738 DQ840869 DQ840885 DQ840898 DQ840902 DQ926246 DQ926249 DQ926313 DQ926315 AB063717 AB063810 AB066882 AB066982 AB067264 AB067265 AB363130 AB363133 AB363178 AB363229 AB363239 AF234248 AJ306671 AY033239 AY033240 AY376073 AY376086 AY376088 AY422530 AY530313 AY640532 AY846271 AY971070 AY971132 AY986395 AY986402 DQ065641 DQ065715 DQ100950 DQ926227 DQ926469 DQ926491 DQ926596 EF178046 EU549734 FJ195526 GU570302 HQ378386 Z46761 AB021522 AB063668 AB363134 AB363177 AB363231 AF021996 AF035794 AF115122 AF119800 AF119801 AF119802 AF119803 AF119804 AF151704 AF174095 AF471243 AF471244 AF471245 AF471248 AF471251 AF471252 AF471253 AJ389186 AJ414018 AJ555260 AJ579155 AJ579190 AJ579223 AJ579232 AJ579237 AJ627246 AY530315 AY685254 AY971117 DQ065650 DQ100894 DQ100911 DQ205140 DQ205152 DQ212511 DQ431495 DQ535391 DQ535412 DQ535423 DQ535428 DQ840729 DQ840811 DQ926123 DQ926333 DQ926625 EF178050 EF633766 EF633767 EF633768 EF633798 FJ492898 GU570300 GU570349 S77136 U64493 U64507 U85230 U96395 X62972 X63081 X64241 X99352 X99366 Z96969 Z96970 Z97036 HM995655 HM995787 HM995788 HM995789 HM995870 L33033 X67907 AY392930 AY393153 AY393157 AY393162 L08089 AF062269 L06912 S72664 X65897 X81736 X81744 X81754 Z11959 BC090940 X61013 X61014 BC073758 AK097320 AK125582 AK130539 AK130586 AK130844 AK301403 TSC_hg19_v1_chr14_-_106573761	400	-	GU552766 DQ454945 DQ454680 DQ454800 DQ100736 HQ392877 AY062313 JN110910 JN111168 L03821 L04324 FJ385334 FJ385335 HM774019 HM774079 HM774175 HM774429 HM774436 HM774460 HM774566 HM774691 HM774780 HM774984 AF165105 AY062308 DQ100831 AJ300807 AB063700 AY423173 AY062309 DQ100870 GU570344 HM994897 HM994907 HM994915 HM995019 HM995419 HM995424 HM995733 HM995761 HM995921 HM995935 HM995953 HM996087 HM996247 HM996409 DQ840731 DQ840896 AB374202 AM279603 AY866783 DQ431491 EF178033 FJ385392 GU570335 AB021538 AB063673 AB066975 AB067002 AB067017 AB067076 AB067261 AB363102 AB363150 AF062210 AF098364 AF174056 AF174100 AF174120 AF301484 AF455549 AF471257 AF471259 AF471261 AF471262 AF471264 AF471363 AF471478 AF471487 AF471497 AJ007956 AJ389180 AJ399809 AJ413989 AJ555276 AJ556639 AJ579273 AM040537 AY268370 AY466509 AY685302 AY685304 AY921574 AY921575 AY927662 AY941906 D83675 DQ065617 DQ065728 DQ535267 DQ535281 DQ535298 DQ535334 DQ535408 DQ535485 DQ926436 DQ926504 DQ926507 DQ926513 DQ926550 EF178020 GU570303 GU570338 GU570343 GU570348 L33984 S65535 Z33898 AY670714 HM995884 AF062141 L03683 L38431 X65894 X81740 M18515 BC053984 TSC_hg19_v1_chr14_-_106586668	13346	-	AF028103 AF028108 Z11951 FJ840130 AF460713 AF460734 DQ454527 DQ454388 DQ454699 GQ232866 DQ454529 GQ232862 GQ232892 GU552777 EF407836 AY003841 DQ454714 GU552715 GU552744 DQ454664 DQ454668 DQ454679 DQ454889 DQ523850 AF209741 FJ385398 FJ873853 GU552716 GU552740 FJ840399 FJ840405 FJ873982 FJ840136 FJ840137 FJ840146 FJ873844 FJ873859 FJ873968 AJ008185 AJ008243 DQ454505 AY003713 AY003823 AY003842 EU433861 AF103214 EF441758 AF209733 AF209739 M18511 EU099088 EU099091 EU099108 EU099125 EU099214 DQ100874 AF103360 AF103031 AF103055 AF103172 AF103027 AY062317 HM773987 JN110484 JN110743 JN110870 JN110880 JN110904 JN111065 FJ385409 FJ385427 GQ504866 HM774017 HM774087 HM774308 HM774638 HM774746 HM774912 HM774921 AF032354 AF103227 AF103255 AF082194 EU146316 EU146375 EU146379 EU146381 EU146388 EU146390 EU146391 AJ271553 AJ300806 DQ926562 L38566 AB066857 HM995144 AF035789 AF035799 AF035798 L26034 AF062296 AF062303 AF471268 DQ454900 DQ524054 HM995097 HM995098 HM995245 HM995265 HM995270 HM995272 HM995274 HM995569 HM995686 HM995688 HM995689 HM995690 HM995691 HM995692 HM995930 HM995937 HM995946 HM996125 HM996208 HM996383 HM996458 DQ322777 DQ840774 DQ840820 DQ840842 DQ840897 AJ278771 AY686927 AY866567 AY998725 DQ100923 DQ100931 DQ926186 DQ926328 DQ926496 EF178079 FJ195531 FJ195532 FJ385300 FJ385301 FJ385374 FJ385399 HM995143 L39128 X79165 AB021509 AB021517 AB021528 AB021540 AB063657 AB063800 AB063845 AB066984 AB067025 AB067128 AB363162 AB363202 AB363206 AB373605 AB373606 AB373610 AB373616 AB373630 AB373634 AF021972 AF035026 AF174091 AF471269 AF471270 AF471271 AF471274 AF471276 AF471277 AF471278 AF471279 AJ249632 AJ401163 AJ401164 AJ556720 AJ579094 AJ579101 AJ579115 AJ579140 AJ579160 AJ579180 AJ579219 AJ579227 AJ579235 AJ579263 AJ579275 AJ579285 AJ627238 AY055479 AY376081 AY971142 D83688 D83689 DQ065634 DQ535287 DQ535290 DQ535292 DQ535322 DQ535337 DQ535365 DQ535372 DQ535396 DQ535403 DQ535404 DQ926160 DQ926428 DQ926446 DQ926474 DQ926484 DQ926537 DQ926556 EF028218 EF178024 FJ195520 FJ195538 FJ385323 GU570304 HM152485 HQ689757 U97245 X62954 X62960 X87453 X99364 Y12699 Z18319 Z18322 Z18323 Z75557 Z98737 Z98738 Z98739 Z98740 AJ401161 M34023 L14818 X56523 X56524 AF431053 AF431055 Z14169 AY505570 X81723 X81743 Z14216 Z80843 L29153 L29154 Z14960 M34032 BC065820 BC014667 TSC_hg19_v1_chr14_-_106610847 AK123981 AK301228 AK130434 AK289373	37440	-	BC021276|IGHD|3495|immunoglobulin heavy constant delta##BC006402|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097367|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123546|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128565|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128625|IGHD|3495|immunoglobulin heavy constant delta##AK129508|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640627|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC067091|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF283666|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC075846|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC037361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097906|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC041037|IGHM|3507|immunoglobulin heavy constant mu##BC018747|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC062335|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC064496|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097345|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK123975|IGH@|3492|immunoglobulin heavy locus##BX640822|IGH@|3492|immunoglobulin heavy locus##AL389978|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BC090940|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073758|IGHM|3507|immunoglobulin heavy constant mu##AK097320|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125582|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130539|IGHM|3507|immunoglobulin heavy constant mu##AK130586|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130844|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301403|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC065820|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC014667|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130434|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.99932	CTCF.p2:9:0.999
chr2	1549889	1550029	reg1011583.p1	10.789	+	NM_175721 NM_175722 AF439430 CU687644	-131780	+	BC063107 NM_000547 NM_001206744 NM_001206745 NM_175719 BC095448 M17755 J02969 J02970 X17358 Y00406	-132704	+	TSC_hg19_v1_chr2_+_946534 BC035783 NM_018968 AJ003029 BC125251	-603380	+	BC098579 TSC_hg19_v1_chr2_-_1748229	198263	-	TSC_hg19_v1_chr2_-_1748282 AF200348 D86983 EF090903	198302	-	TSC_hg19_v1_chr2_-_1748288 NM_012293	198334	-	NM_175721|TPO|7173|thyroid peroxidase##NM_175722|TPO|7173|thyroid peroxidase##AF439430|TPO|7173|thyroid peroxidase##BC063107|TPO|7173|thyroid peroxidase##NM_000547|TPO|7173|thyroid peroxidase##NM_001206744|TPO|7173|thyroid peroxidase##NM_001206745|TPO|7173|thyroid peroxidase##NM_175719|TPO|7173|thyroid peroxidase##BC095448|TPO|7173|thyroid peroxidase##M17755|TPO|7173|thyroid peroxidase##J02969|TPO|7173|thyroid peroxidase##J02970|TPO|7173|thyroid peroxidase##X17358|TPO|7173|thyroid peroxidase##Y00406|TPO|7173|thyroid peroxidase##BC035783|SNTG2|54221|syntrophin, gamma 2##NM_018968|SNTG2|54221|syntrophin, gamma 2##AJ003029|SNTG2|54221|syntrophin, gamma 2##BC125251|SNTG2|54221|syntrophin, gamma 2##BC098579|PXDN|7837|peroxidasin homolog (Drosophila)##AF200348|PXDN|7837|peroxidasin homolog (Drosophila)##D86983|PXDN|7837|peroxidasin homolog (Drosophila)##EF090903|PXDN|7837|peroxidasin homolog (Drosophila)##NM_012293|PXDN|7837|peroxidasin homolog (Drosophila)	0.601297	CTCF.p2:2:0.601
chr6	150739432	150739556	reg1010047.p1	10.789	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	-49336	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-275253	+	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	-349281	-	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	181526	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	447338	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	447427	+	AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3##NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.983724	CTCF.p2:-15:0.984
chr9	6667777	6667909	reg1010905.p1	10.789	+	BC111993 BC111995 M63635 D90239 M64590 AK314156 NM_000170	-22216	-	TSC_hg19_v1_chr9_+_6413338 AF274049 AB071698 EU176286 EU176602 AB385208	-254438	+	TSC_hg19_v1_chr9_+_6413200 AK308433	-254646	+	AK310439 NM_001146696	53019	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	89824	+	TSC_hg19_v1_chr9_+_6757984 AB018323 AK304095 AK314355 AB037901 BC008296 AK303651 AK304032 BC104859 BC104861 BC143571	90196	+	BC111993|GLDC|2731|glycine dehydrogenase (decarboxylating)##BC111995|GLDC|2731|glycine dehydrogenase (decarboxylating)##M63635|GLDC|2731|glycine dehydrogenase (decarboxylating)##D90239|GLDC|2731|glycine dehydrogenase (decarboxylating)##M64590|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK314156|GLDC|2731|glycine dehydrogenase (decarboxylating)##NM_000170|GLDC|2731|glycine dehydrogenase (decarboxylating)##AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK308433|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C##AB018323|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304095|KDM4C|23081|lysine (K)-specific demethylase 4C##AK314355|KDM4C|23081|lysine (K)-specific demethylase 4C##AB037901|KDM4C|23081|lysine (K)-specific demethylase 4C##BC008296|KDM4C|23081|lysine (K)-specific demethylase 4C##AK303651|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304032|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104859|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104861|KDM4C|23081|lysine (K)-specific demethylase 4C##BC143571|KDM4C|23081|lysine (K)-specific demethylase 4C	0.966514	CTCF.p2:17:0.967
chr1	70203369	70203506	reg1010218.p1	10.788	+	TSC_hg19_v1_chr1_+_70034033 AF498274	-169357	+	AK294206 TSC_hg19_v1_chr1_+_70033988	-169466	+	TSC_hg19_v1_chr1_+_70032819 BC080568	-170599	+	AF434715 NM_020794 BC128989 CR749629	22445	+	BC003407 CU678999 TSC_hg19_v1_chr1_-_70671236 BC008586	467773	-	TSC_hg19_v1_chr1_-_70671263 AK022951 NM_017768	467874	-	AF498274|LRRC7|57554|leucine rich repeat containing 7##AF434715|LRRC7|57554|leucine rich repeat containing 7##NM_020794|LRRC7|57554|leucine rich repeat containing 7##BC128989|LRRC7|57554|leucine rich repeat containing 7##CR749629|LRRC7|57554|leucine rich repeat containing 7##BC003407|LRRC40|55631|leucine rich repeat containing 40##BC008586|LRRC40|55631|leucine rich repeat containing 40##AK022951|LRRC40|55631|leucine rich repeat containing 40##NM_017768|LRRC40|55631|leucine rich repeat containing 40	0.998429	CTCF.p2:24:0.998
chr6	116332108	116332230	reg1008731.p1	10.788	+	AF503292 NM_153612 BC093911 BC093913	-1948145	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-2039833	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	-2039897	-	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	49713	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	89840	+	AK097758 TSC_hg19_v1_chr6_-_116422450	90261	-	AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	0.9999	CTCF.p2:-13:0.984
chr1	20031151	20031271	reg1011352.p1	10.787	+	L41147 NM_000871	-39432	+	AK309257 NM_001204086	-58952	+	AK313265 NM_001204085	-59346	+	TSC_hg19_v1_chr1_-_20126374 BX640987 NM_181719	95199	-	CR457228 BC051880 BC030960 AK000232 AK222991 NM_019062	110470	-	TSC_hg19_v1_chr1_+_20208887 NM_015207	177653	+	L41147|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##NM_000871|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4##NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4##CR457228|RNF186|54546|ring finger protein 186##BC051880|RNF186|54546|ring finger protein 186##BC030960|RNF186|54546|ring finger protein 186##AK000232|RNF186|54546|ring finger protein 186##AK222991|RNF186|54546|ring finger protein 186##NM_019062|RNF186|54546|ring finger protein 186##NM_015207|OTUD3|23252|OTU domain containing 3	0.075614	
chr2	214799421	214799545	reg1010056.p2	10.786	+	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	-650326	+	AK124960 NM_001242575	-650555	-	BC028936 NM_001079526	-783151	-	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	476977	+	AB590656 JF790283 JF790285 JF790287 TSC_hg19_v1_chr2_-_215674408 BC126426 BC126428 AX794378 JF790280 JF790281 JF790282 JF790284 U76638 AK314260 AK301843 JF790286 AK223409 NM_000465	874876	-	AY033486 NM_015657	1097326	-	BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##JF790283|BARD1|580|BRCA1 associated RING domain 1##JF790285|BARD1|580|BRCA1 associated RING domain 1##JF790287|BARD1|580|BRCA1 associated RING domain 1##BC126426|BARD1|580|BRCA1 associated RING domain 1##BC126428|BARD1|580|BRCA1 associated RING domain 1##AX794378|BARD1|580|BRCA1 associated RING domain 1##JF790280|BARD1|580|BRCA1 associated RING domain 1##JF790281|BARD1|580|BRCA1 associated RING domain 1##JF790282|BARD1|580|BRCA1 associated RING domain 1##JF790284|BARD1|580|BRCA1 associated RING domain 1##U76638|BARD1|580|BRCA1 associated RING domain 1##AK314260|BARD1|580|BRCA1 associated RING domain 1##AK301843|BARD1|580|BRCA1 associated RING domain 1##JF790286|BARD1|580|BRCA1 associated RING domain 1##AK223409|BARD1|580|BRCA1 associated RING domain 1##NM_000465|BARD1|580|BRCA1 associated RING domain 1##AY033486|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_015657|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12	0.963448	CTCF.p2:-9:0.963
chr5	158583904	158584032	reg1009819.p1	10.786	+	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	-57226	-	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	-57511	-	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1297878	-	AK304228 NM_001199382	50680	-	AK056513 NM_144726	50865	-	AK311433 AK304435 NM_001199381	51141	-	BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145##AK056513|RNF145|153830|ring finger protein 145##NM_144726|RNF145|153830|ring finger protein 145##AK311433|RNF145|153830|ring finger protein 145##AK304435|RNF145|153830|ring finger protein 145##NM_001199381|RNF145|153830|ring finger protein 145	0.991012	CTCF.p2:-10:0.991
chr8	11424732	11424860	reg1008823.p2	10.786	+	S76617 NM_001715 BC018703 BC004473 BC038555	-73203	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-100567	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-219792	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	136924	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	202472	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	235388	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.261391	CTCF.p2:-11:0.261
chr1	172368753	172368876	reg1007110.p2	10.785	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-558111	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-617976	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-618000	+	AL035295 NM_139240 BC038410	21014	+	TSC_hg19_v1_chr1_-_172413202 BC006539	44374	-	TSC_hg19_v1_chr1_-_172413207 AK308201	44393	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.108419	
chr1	151128625	151128727	reg1008591.p1	10.784	+	AF339152 AF339153 AF339154 AB022434 AB058772 TSC_hg19_v1_chr1_-_151119105 AK302862 AK311613 NM_001178061 NM_001178062 NM_030913	-9629	-	BC027033 NM_144618 TSC_hg19_v1_chr1_+_151043238 AK092230 AX747418 AK313606 AK301882	-85492	+	TSC_hg19_v1_chr1_+_151032908 BC019253	-95767	+	NM_001204848 NM_024575 AF271774 AL833373 AK027120 AK225472 TSC_hg19_v1_chr1_+_151129149 BC063014	454	+	TSC_hg19_v1_chr1_-_151138337 BX647911 NM_212551 AK298706 NM_001136543	9700	-	NM_001204856 NM_024041 AK301644 TSC_hg19_v1_chr1_+_151138545 AK056322 BC000264 DQ892531 DQ895742	9886	+	AF339152|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AF339153|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AF339154|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AB022434|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AB058772|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AK302862|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AK311613|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##NM_001178061|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##NM_001178062|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##NM_030913|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##BC027033|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##NM_144618|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##AK092230|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##AK313606|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##AK301882|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##BC019253|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##NM_001204848|TNFAIP8L2-SCNM1|100534012|TNFAIP8L2-SCNM1 readthrough##NM_024575|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##AF271774|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##AL833373|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##AK027120|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##AK225472|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##BC063014|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##BX647911|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##NM_212551|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##AK298706|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##NM_001136543|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##NM_001204856|SCNM1|79005|sodium channel modifier 1##NM_024041|SCNM1|79005|sodium channel modifier 1##AK301644|SCNM1|79005|sodium channel modifier 1##AK056322|SCNM1|79005|sodium channel modifier 1##BC000264|SCNM1|79005|sodium channel modifier 1##DQ892531|SCNM1|79005|sodium channel modifier 1##DQ895742|SCNM1|79005|sodium channel modifier 1	0.981359	CTCF.p2:-16:0.981
chr11	87965184	87965296	reg1009287.p1	10.782	+	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	-56648	-	AK024853 TSC_hg19_v1_chr11_+_87032449	-932798	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	-1216262	+	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	105627	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	105662	-	TSC_hg19_v1_chr11_-_88070905 BX537913 NM_001114173 NM_001814 NM_148170	105691	-	BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family##AK024853|TMEM135|65084|transmembrane protein 135##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C##BX537913|CTSC|1075|cathepsin C##NM_001114173|CTSC|1075|cathepsin C##NM_001814|CTSC|1075|cathepsin C##NM_148170|CTSC|1075|cathepsin C	0.959129	CTCF.p2:4:0.959
chr11	59304814	59304937	reg1009284.p1	10.781	+	NM_001004711	-22490	+	NM_001004706	-33827	+	BC136893 BC136894 NM_001004705	-60002	+	TSC_hg19_v1_chr11_-_59383172 BC051350 BC063121	78294	-	TSC_hg19_v1_chr11_-_59383232 BC011581	78335	-	AF185696 M86917 NM_002556	78741	-	NM_001004711|OR4D9|390199|olfactory receptor, family 4, subfamily D, member 9##NM_001004706|OR4D11|219986|olfactory receptor, family 4, subfamily D, member 11##BC136893|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##BC136894|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##NM_001004705|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##BC051350|OSBP|5007|oxysterol binding protein##BC063121|OSBP|5007|oxysterol binding protein##BC011581|OSBP|5007|oxysterol binding protein##AF185696|OSBP|5007|oxysterol binding protein##M86917|OSBP|5007|oxysterol binding protein##NM_002556|OSBP|5007|oxysterol binding protein	0.941577	CTCF.p2:-13:0.942
chr12	68434353	68434488	reg1010026.p1	10.781	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	-391797	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-770990	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-771248	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	119002	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	185132	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	212884	-	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22	0.980437	CTCF.p2:0:0.980
chr13	52917570	52917701	reg1011129.p1	10.781	+	TSC_hg19_v1_chr13_-_52768573 AK307345 AK307124 AK309380 BX648914 AK027536	-149076	-	NM_001146099 NM_002498	-183640	-	NM_152720 TSC_hg19_v1_chr13_-_52733672 BC019916 AK290259	-183909	-	AB044385 TSC_hg19_v1_chr13_-_52980275 BC063842 AK298974 AK315087 AY358149	62643	-	AK096289 NM_018676 NM_199263	62993	-	TSC_hg19_v1_chr13_-_53024744 AF151903 BC050439 BC037279 AK289740 NM_016075	107132	-	AK307345|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK307124|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK309380|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##BX648914|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK027536|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##AB044385|THSD1|55901|thrombospondin, type I, domain containing 1##BC063842|THSD1|55901|thrombospondin, type I, domain containing 1##AK298974|THSD1|55901|thrombospondin, type I, domain containing 1##AK315087|THSD1|55901|thrombospondin, type I, domain containing 1##AY358149|THSD1|55901|thrombospondin, type I, domain containing 1##AK096289|THSD1|55901|thrombospondin, type I, domain containing 1##NM_018676|THSD1|55901|thrombospondin, type I, domain containing 1##NM_199263|THSD1|55901|thrombospondin, type I, domain containing 1##AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	0.080129	
chr2	166060603	166060714	reg1010474.p1	10.781	+	AF225986 AF225987 AK299757 TSC_hg19_v1_chr2_-_166060561 NM_001081676 NM_001081677 NM_006922 DQ993536	-81	-	AK293998 AK097141 NM_001199148 NM_173512	-248644	-	AK225849 BC006264 TSC_hg19_v1_chr2_-_165698685 AK294937	-362036	-	AK289656 NM_001040142 DQ993531 BC029489 BC047398 BC048417	35274	+	NM_021007	89682	+	NM_001040143	91624	+	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AK293998|SLC38A11|151258|solute carrier family 38, member 11##AK097141|SLC38A11|151258|solute carrier family 38, member 11##NM_001199148|SLC38A11|151258|solute carrier family 38, member 11##NM_173512|SLC38A11|151258|solute carrier family 38, member 11##AK225849|COBLL1|22837|COBL-like 1##BC006264|COBLL1|22837|COBL-like 1##AK294937|COBLL1|22837|COBL-like 1##AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_021007|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_001040143|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	0.999312	CTCF.p2:4:0.999
chr2	68510074	68510205	reg1011056.p1	10.781	+	TSC_hg19_v1_chr2_-_68479665 AK307136 AK314893 BC027913 NM_000945	-30544	-	TSC_hg19_v1_chr2_+_68384999 BC008304 NM_020143 AK291715 AF349314 AF164799 AK313204 AK223118 L48692 AK225641 BC018152	-125042	+	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	-125505	-	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	36961	-	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	82233	+	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	82318	+	AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC008304|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_020143|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK291715|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF349314|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF164799|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK313204|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK223118|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK225641|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##BC018152|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin##DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin	0.995241	CTCF.p2:12:0.995
chr12	57608189	57608331	reg1003923.p3	10.779	+	TSC_hg19_v1_chr12_+_57522452 BC045107	-85797	+	TSC_hg19_v1_chr12_+_57522265 BC052593 BC072015 NM_002332 X13916	-85978	+	TSC_hg19_v1_chr12_-_57505177 NM_001178078 NM_001178080 NM_001178081 NM_003153	-103063	-	AY358614 NM_007224 TSC_hg19_v1_chr12_+_57610601 BC036679 AK094231 AK290949 BC053581 CU690992	2404	+	NM_001166356 NM_005412 TSC_hg19_v1_chr12_+_57623504 AK055053 AK223555 AK298231 AK301339 AK303827 BC032584 BC044211 AK295941 BC008066 BC012833 BC011911 BC091501 CU680112 CU689432 AB527799 BT006866 DQ891309 DQ894430	15198	+	NM_001166358 BX647711 AK301443 TSC_hg19_v1_chr12_+_57623972 BX648847 NM_001166359 NM_001166357 BC004189 BC004215 BC008711 AK296183 AK297173 AK315916	15728	+	BC045107|LRP1|4035|low density lipoprotein receptor-related protein 1##BC052593|LRP1|4035|low density lipoprotein receptor-related protein 1##BC072015|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_002332|LRP1|4035|low density lipoprotein receptor-related protein 1##X13916|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_001178078|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178080|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178081|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_003153|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AY358614|NXPH4|11247|neurexophilin 4##NM_007224|NXPH4|11247|neurexophilin 4##BC036679|NXPH4|11247|neurexophilin 4##AK094231|NXPH4|11247|neurexophilin 4##AK290949|NXPH4|11247|neurexophilin 4##BC053581|NXPH4|11247|neurexophilin 4##NM_001166356|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_005412|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK055053|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK223555|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK298231|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301339|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK303827|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC032584|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC044211|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK295941|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008066|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC011911|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC091501|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BT006866|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ891309|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ894430|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166358|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX647711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301443|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX648847|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166359|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166357|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK296183|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK297173|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK315916|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)	0.745919	CTCF.p2:0:0.746
chr2	47003994	47004118	reg1011780.p1	10.779	+	TSC_hg19_v1_chr2_+_46926340 BC032862 AF073958 NM_144949	-77655	+	TSC_hg19_v1_chr2_+_46926049 AK290194 AK296796 AB014571 AL136896 NM_014011	-77983	+	TSC_hg19_v1_chr2_+_46844353 NM_014171 AK291298 AF161488 BC018653 BC006980 BC006979	-159703	+	TSC_hg19_v1_chr2_-_47134945 M23161	130955	-	TSC_hg19_v1_chr2_-_47142893 AF475284 BC037845	138835	-	TSC_hg19_v1_chr2_-_47142934 BC040357	138878	-	BC032862|SOCS5|9655|suppressor of cytokine signaling 5##AF073958|SOCS5|9655|suppressor of cytokine signaling 5##NM_144949|SOCS5|9655|suppressor of cytokine signaling 5##AK290194|SOCS5|9655|suppressor of cytokine signaling 5##AB014571|SOCS5|9655|suppressor of cytokine signaling 5##AL136896|SOCS5|9655|suppressor of cytokine signaling 5##NM_014011|SOCS5|9655|suppressor of cytokine signaling 5##NM_014171|CRIPT|9419|cysteine-rich PDZ-binding protein##AK291298|CRIPT|9419|cysteine-rich PDZ-binding protein##AF161488|CRIPT|9419|cysteine-rich PDZ-binding protein##BC018653|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006980|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006979|CRIPT|9419|cysteine-rich PDZ-binding protein##M23161|MCFD2|90411|multiple coagulation factor deficiency 2##AF475284|MCFD2|90411|multiple coagulation factor deficiency 2##BC037845|MCFD2|90411|multiple coagulation factor deficiency 2##BC040357|MCFD2|90411|multiple coagulation factor deficiency 2	0.968898	CTCF.p2:6:0.969
chr4	147262057	147262187	reg1010255.p1	10.779	+	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	-165255	+	BC033879 TSC_hg19_v1_chr4_-_146859976	-402154	-	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	-402445	-	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	180874	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	297969	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	604876	-	NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29	0.808916	CTCF.p2:-6:0.809
chr4	47670976	47671120	reg1012462.p1	10.779	+	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	-183718	+	TSC_hg19_v1_chr4_-_47465720 BC008371	-205320	-	TSC_hg19_v1_chr4_-_47465683 AY542163 BC015145 NM_017845 AK000509 BC019826 AF182421	-205369	-	TSC_hg19_v1_chr4_+_47708352 D28417	37306	+	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	169042	-	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	245547	-	BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D##BC008371|COMMD8|54951|COMM domain containing 8##AY542163|COMMD8|54951|COMM domain containing 8##BC015145|COMMD8|54951|COMM domain containing 8##NM_017845|COMMD8|54951|COMM domain containing 8##AK000509|COMMD8|54951|COMM domain containing 8##BC019826|COMMD8|54951|COMM domain containing 8##AF182421|COMMD8|54951|COMM domain containing 8##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1	0.952629	CTCF.p2:-2:0.953
chr7	90057192	90057325	reg1008776.p2	10.778	+	TSC_hg19_v1_chr7_+_90032774 AL136770 BC016061	-24454	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	-24554	+	TSC_hg19_v1_chr7_+_89976015 AF351613 NM_001042717 NM_033107 AK095561 BC107714 CR933597 AK294325 BC144162	-81254	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	168551	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	281525	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	281902	+	AL136770|CLDN12|9069|claudin 12##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12##AF351613|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001042717|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_033107|GTPBP10|85865|GTP-binding protein 10 (putative)##AK095561|GTPBP10|85865|GTP-binding protein 10 (putative)##BC107714|GTPBP10|85865|GTP-binding protein 10 (putative)##CR933597|GTPBP10|85865|GTP-binding protein 10 (putative)##AK294325|GTPBP10|85865|GTP-binding protein 10 (putative)##BC144162|GTPBP10|85865|GTP-binding protein 10 (putative)##AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14	0.446902	CTCF.p2:13:0.447
chr3	27399289	27399421	reg1010703.p1	10.777	+	BC067784 TSC_hg19_v1_chr3_+_26664296 AF396933 NM_052953	-735055	+	TSC_hg19_v1_chr3_+_25831590 NM_001145391 NM_017897 AK000611 AK304821 AK225260 BC008202	-1567775	+	AK296047 NM_001145294	-1567843	-	TSC_hg19_v1_chr3_-_27410884 AK123061 NM_199347	11558	-	AF047033 AF089726 NM_003615	98889	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	126470	-	BC067784|LRRC3B|116135|leucine rich repeat containing 3B##AF396933|LRRC3B|116135|leucine rich repeat containing 3B##NM_052953|LRRC3B|116135|leucine rich repeat containing 3B##NM_001145391|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##NM_017897|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK000611|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK304821|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK225260|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##BC008202|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK296047|NGLY1|55768|N-glycanase 1##NM_001145294|NGLY1|55768|N-glycanase 1##AK123061|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##NM_199347|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7	0.625273	CTCF.p2:-1:0.625
chr1	4712749	4712879	reg1011808.p1	10.776	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-895969	-	TSC_hg19_v1_chr1_-_3816816 CU688284 BC035643 BC047611	-896051	-	BC048797 NM_004402	-938970	+	TSC_hg19_v1_chr1_+_4714668 AF175409	1915	+	AY282806 NM_001042478 NM_018836	2290	+	NM_001199861	1339543	+	BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##BC035643|C1orf174|339448|chromosome 1 open reading frame 174##BC047611|C1orf174|339448|chromosome 1 open reading frame 174##BC048797|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)##NM_004402|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)##AF175409|AJAP1|55966|adherens junctions associated protein 1##AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2	0.964019	CTCF.p2:0:0.964
chr15	64338732	64338850	reg1009034.p1	10.774	+	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	-181	-	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-212651	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-212671	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	47306	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	49349	+	TSC_hg19_v1_chr15_+_64388200 AK310618 BC000357 AK222793 AB528736 AF065483 AF065484 BT006983 DQ890751 DQ893918	49415	+	AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1##AK310618|SNX1|6642|sorting nexin 1##BC000357|SNX1|6642|sorting nexin 1##AK222793|SNX1|6642|sorting nexin 1##AF065483|SNX1|6642|sorting nexin 1##AF065484|SNX1|6642|sorting nexin 1##BT006983|SNX1|6642|sorting nexin 1##DQ890751|SNX1|6642|sorting nexin 1##DQ893918|SNX1|6642|sorting nexin 1	0.995217	CTCF.p2:-27:0.995
chr2	204318725	204318831	reg1009370.p2	10.774	+	TSC_hg19_v1_chr2_+_204193004 NM_005759 AK311427 AK302853 AK294429 AK299824 AK316000 BC001439 AB590360 AF260261 BT009920 CU674706 DQ890735 DQ893907	-125643	+	TSC_hg19_v1_chr2_+_204103740 AF183412 AK297082 BC093022 BC033752 BC020616 AL832998 AY359068 AK307931 DQ890918 DQ894068 DQ894069 CU676580	-215057	+	NM_177538	-215615	+	TSC_hg19_v1_chr2_-_204399987 BC032486 AK096270 AB053311 AJ584699 AY494951 AY523977 AY523978 NM_203365 NM_213589	81368	-	NM_001243077 NM_001243078 NM_006139 AJ517504 AK313313 J02988 TSC_hg19_v1_chr2_+_204571361 AK303421	252502	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	252621	+	NM_005759|ABI2|10152|abl-interactor 2##AK302853|ABI2|10152|abl-interactor 2##AK294429|ABI2|10152|abl-interactor 2##AK299824|ABI2|10152|abl-interactor 2##AK316000|ABI2|10152|abl-interactor 2##BC001439|ABI2|10152|abl-interactor 2##AF260261|ABI2|10152|abl-interactor 2##BT009920|ABI2|10152|abl-interactor 2##DQ890735|ABI2|10152|abl-interactor 2##DQ893907|ABI2|10152|abl-interactor 2##AF183412|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK297082|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC093022|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC033752|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC020616|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AL832998|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AY359068|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK307931|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ890918|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ894068|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ894069|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##NM_177538|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK096270|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AB053311|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AJ584699|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY494951|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523977|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523978|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_203365|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_213589|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_001243077|CD28|940|CD28 molecule##NM_001243078|CD28|940|CD28 molecule##NM_006139|CD28|940|CD28 molecule##AJ517504|CD28|940|CD28 molecule##AK313313|CD28|940|CD28 molecule##J02988|CD28|940|CD28 molecule##AK303421|CD28|940|CD28 molecule##BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule	0.712325	CTCF.p2:2:0.712
chr3	48236029	48236177	reg1012182.p1	10.774	+	BC007401 BC018642 NM_001789 NM_201567 TSC_hg19_v1_chr3_-_48229900 M81933	-6244	-	AF277722 AY137580 EU812118 CU675643 AB590275 DQ890753 DQ892919 DQ896168 AK290554 TSC_hg19_v1_chr3_-_48229511	-6675	-	TSC_hg19_v1_chr3_-_48130743 AK054577 NM_001134364 NM_002375 NM_030885	-105403	-	NM_004345 BC055089 X89658 U19970 CU691114 AB590666 AY251531 Z38026 AY162210 CR457083 CR541961	28815	+	TSC_hg19_v1_chr3_+_48282593 BC028160 BC062690 AK298782 AY258146 NM_016089 AL832831 BC006247 BC048798 BC005859 AF114816 AF114817 AB463372	46507	+	DQ892283 DQ895483 AK308970 AF051941 TSC_hg19_v1_chr3_-_48342858 U90449 BC001808 BC012828 NM_005793 AK222555 AK294809 AK307332 AK297364 AK309090	106748	-	BC007401|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##BC018642|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_001789|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_201567|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##M81933|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AK054577|MAP4|4134|microtubule-associated protein 4##NM_001134364|MAP4|4134|microtubule-associated protein 4##NM_002375|MAP4|4134|microtubule-associated protein 4##NM_030885|MAP4|4134|microtubule-associated protein 4##NM_004345|CAMP|820|cathelicidin antimicrobial peptide##BC055089|CAMP|820|cathelicidin antimicrobial peptide##X89658|CAMP|820|cathelicidin antimicrobial peptide##U19970|CAMP|820|cathelicidin antimicrobial peptide##AY251531|CAMP|820|cathelicidin antimicrobial peptide##Z38026|CAMP|820|cathelicidin antimicrobial peptide##AY162210|CAMP|820|cathelicidin antimicrobial peptide##CR457083|CAMP|820|cathelicidin antimicrobial peptide##CR541961|CAMP|820|cathelicidin antimicrobial peptide##BC028160|ZNF589|51385|zinc finger protein 589##BC062690|ZNF589|51385|zinc finger protein 589##AK298782|ZNF589|51385|zinc finger protein 589##AY258146|ZNF589|51385|zinc finger protein 589##NM_016089|ZNF589|51385|zinc finger protein 589##AL832831|ZNF589|51385|zinc finger protein 589##BC006247|ZNF589|51385|zinc finger protein 589##BC048798|ZNF589|51385|zinc finger protein 589##BC005859|ZNF589|51385|zinc finger protein 589##AF114816|ZNF589|51385|zinc finger protein 589##AF114817|ZNF589|51385|zinc finger protein 589##DQ892283|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##DQ895483|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK308970|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AF051941|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##U90449|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC001808|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC012828|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##NM_005793|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK222555|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK294809|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK297364|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)	0.992465	CTCF.p2:-4:0.992
chr14	106147236	106147393	reg1004345.p3	10.773	+	TSC_hg19_v1_chr14_-_106111114 AJ294731	-36198	-	BC040042 TSC_hg19_v1_chr14_-_106110945	-36391	-	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	-54978	-	TSC_hg19_v1_chr14_-_106174914 BC113815 AJ294729	27639	-	TSC_hg19_v1_chr14_-_106208542 AF487336	61235	-	AF150959 TSC_hg19_v1_chr14_-_106208714 S76144	61396	-	AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AJ294729|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.618716	CTCF.p2:10:0.619
chr18	59568727	59568854	reg1011937.p1	10.773	+	AK096495 NM_173557	-8487	-	AF217289 BC101047 BC101048 BC101049 NM_031891	-411016	+	AK314130 NM_005912	-1528790	-	AF109219 TSC_hg19_v1_chr18_-_59854208	285404	-	TSC_hg19_v1_chr18_-_59854227 BC028363	285431	-	TSC_hg19_v1_chr18_-_59854258 AK315134	285453	-	AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##BC028363|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##AK315134|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.983567	CTCF.p2:-2:0.984
chr2	59252427	59252538	reg1009469.p1	10.773	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-784000	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-978494	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-978728	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	1528040	-	AF080216 TSC_hg19_v1_chr2_-_60780784	1528296	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	1731002	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.992038	CTCF.p2:0:0.992
chr4	89290536	89290642	reg1008827.p2	10.773	+	AY435431 NM_152542 TSC_hg19_v1_chr4_-_89205908 AL834167	-84686	-	TSC_hg19_v1_chr4_-_89205714 AL834271 AK314417 AK054678 AY157615 AY994097 AF351614 BC020850 BC037552	-84862	-	BC021281 NM_004827 AF151530	-210552	-	TSC_hg19_v1_chr4_+_89299890 AF336798 AY653201 AY653202 AY653203 NM_001165136 NM_017912	9293	+	AK295832 TSC_hg19_v1_chr4_+_89300006 BC042047	9408	+	TSC_hg19_v1_chr4_+_89300147 AK092403 AX747525 BX647121	9577	+	AY435431|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##NM_152542|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AL834167|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AL834271|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AK314417|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AK054678|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY157615|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY994097|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AF351614|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC020850|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC037552|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2##NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2##AF336798|HERC6|55008|hect domain and RLD 6##AY653201|HERC6|55008|hect domain and RLD 6##AY653202|HERC6|55008|hect domain and RLD 6##AY653203|HERC6|55008|hect domain and RLD 6##NM_001165136|HERC6|55008|hect domain and RLD 6##NM_017912|HERC6|55008|hect domain and RLD 6##AK295832|HERC6|55008|hect domain and RLD 6##BC042047|HERC6|55008|hect domain and RLD 6##AK092403|HERC6|55008|hect domain and RLD 6##BX647121|HERC6|55008|hect domain and RLD 6	0.947707	CTCF.p2:-6:0.948
chr19	44314068	44314196	reg1011330.p1	10.772	+	CU691254 AY358719 BC057816 AK301693 NM_001031749	-7564	-	TSC_hg19_v1_chr19_-_44285437 AF022797 NM_002250	-28692	-	AB128983 AB128984 AB128985 AF000972 AF022150 BT007426 CU677271 DQ891493 DQ894684 BC015337 AF395661 TSC_hg19_v1_chr19_-_44285137 AF033021	-29057	-	TSC_hg19_v1_chr19_-_44324785 AK055031 NM_182573	10655	-	AK294852 NM_181845 TSC_hg19_v1_chr19_+_44331566 AK098175	17378	+	AY166785 BC101333 NM_001033719 BC101332 AK300120	70158	-	AY358719|LYPD5|284348|LY6/PLAUR domain containing 5##BC057816|LYPD5|284348|LY6/PLAUR domain containing 5##AK301693|LYPD5|284348|LY6/PLAUR domain containing 5##NM_001031749|LYPD5|284348|LY6/PLAUR domain containing 5##AF022797|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##NM_002250|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128983|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128984|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128985|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF000972|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF022150|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##BT007426|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##DQ891493|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##DQ894684|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##BC015337|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF395661|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF033021|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AK055031|LYPD5|284348|LY6/PLAUR domain containing 5##NM_182573|LYPD5|284348|LY6/PLAUR domain containing 5##AK294852|ZNF283|284349|zinc finger protein 283##NM_181845|ZNF283|284349|zinc finger protein 283##AK098175|ZNF283|284349|zinc finger protein 283##AY166785|ZNF404|342908|zinc finger protein 404##BC101333|ZNF404|342908|zinc finger protein 404##NM_001033719|ZNF404|342908|zinc finger protein 404##BC101332|ZNF404|342908|zinc finger protein 404##AK300120|ZNF404|342908|zinc finger protein 404	0.998542	CTCF.p2:11:0.999
chr20	5914543	5914690	reg1010424.p1	10.772	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	-22490	+	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	-183550	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	-323029	-	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	16507	-	AJ439063 NM_032485 NM_182802 AK297806 BC101054 BC101055 BC101056 BC101057 BC080656 AY158211 BC005170 AK314654	16867	+	TSC_hg19_v1_chr20_+_5986738 NM_019095	72044	+	NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AJ439063|MCM8|84515|minichromosome maintenance complex component 8##NM_032485|MCM8|84515|minichromosome maintenance complex component 8##NM_182802|MCM8|84515|minichromosome maintenance complex component 8##AK297806|MCM8|84515|minichromosome maintenance complex component 8##BC101054|MCM8|84515|minichromosome maintenance complex component 8##BC101055|MCM8|84515|minichromosome maintenance complex component 8##BC101056|MCM8|84515|minichromosome maintenance complex component 8##BC101057|MCM8|84515|minichromosome maintenance complex component 8##BC080656|MCM8|84515|minichromosome maintenance complex component 8##AY158211|MCM8|84515|minichromosome maintenance complex component 8##BC005170|MCM8|84515|minichromosome maintenance complex component 8##AK314654|MCM8|84515|minichromosome maintenance complex component 8##NM_019095|CRLS1|54675|cardiolipin synthase 1	0.705821	CTCF.p2:26:0.706
chr9	127657026	127657137	reg1008350.p2	10.772	+	TSC_hg19_v1_chr9_+_127631514 AF087842 BC000018 BC002418 HQ448697	-25549	+	TSC_hg19_v1_chr9_+_127631493 BC000798 NM_030978 AK308570	-25595	+	TSC_hg19_v1_chr9_+_127631421 AK315604	-25651	+	TSC_hg19_v1_chr9_-_127703273 AK302445	46180	-	TSC_hg19_v1_chr9_-_127703357 BC032853 U51587 NM_002077	46258	-	AB590983 TSC_hg19_v1_chr9_-_127905808 BC104030 BC104031 BC104032 AK098024 AK093983 AX748393 NM_001144877 NM_173690	248710	-	AF087842|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##BC000018|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##BC002418|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##HQ448697|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##BC000798|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##NM_030978|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##AK315604|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##AK302445|GOLGA1|2800|golgin A1##BC032853|GOLGA1|2800|golgin A1##U51587|GOLGA1|2800|golgin A1##NM_002077|GOLGA1|2800|golgin A1##BC104030|SCAI|286205|suppressor of cancer cell invasion##BC104031|SCAI|286205|suppressor of cancer cell invasion##BC104032|SCAI|286205|suppressor of cancer cell invasion##AK098024|SCAI|286205|suppressor of cancer cell invasion##AK093983|SCAI|286205|suppressor of cancer cell invasion##NM_001144877|SCAI|286205|suppressor of cancer cell invasion##NM_173690|SCAI|286205|suppressor of cancer cell invasion	0.908231	CTCF.p2:5:0.908
chr17	38948185	38948314	reg1012221.p1	10.771	+	AJ564206 NM_181537	-9464	-	BC132951 BC136896 AJ564205 NM_181539	-19844	-	AB463812 AJ564204 AK129503 NM_181534	-36696	-	AB463813 AJ564207 AK129827 NM_181535	7929	-	NM_001195387 TSC_hg19_v1_chr17_+_38975396 NM_145274 BC015365 AK298616 AK097454 NM_001195386	27140	+	J04029 AB590331 DQ893356 DQ896675 BC034697 NM_000421 TSC_hg19_v1_chr17_-_38978867	30598	-	AJ564206|KRT27|342574|keratin 27##NM_181537|KRT27|342574|keratin 27##BC132951|KRT26|353288|keratin 26##BC136896|KRT26|353288|keratin 26##AJ564205|KRT26|353288|keratin 26##NM_181539|KRT26|353288|keratin 26##AJ564204|KRT25|147183|keratin 25##AK129503|KRT25|147183|keratin 25##NM_181534|KRT25|147183|keratin 25##AJ564207|KRT28|162605|keratin 28##AK129827|KRT28|162605|keratin 28##NM_181535|KRT28|162605|keratin 28##NM_001195387|TMEM99|147184|transmembrane protein 99##NM_145274|TMEM99|147184|transmembrane protein 99##BC015365|TMEM99|147184|transmembrane protein 99##AK298616|TMEM99|147184|transmembrane protein 99##AK097454|TMEM99|147184|transmembrane protein 99##NM_001195386|TMEM99|147184|transmembrane protein 99##J04029|KRT10|3858|keratin 10##DQ893356|KRT10|3858|keratin 10##DQ896675|KRT10|3858|keratin 10##BC034697|KRT10|3858|keratin 10##NM_000421|KRT10|3858|keratin 10	0.038377	
chr18	60625229	60625348	reg1009029.p1	10.771	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-240980	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-241362	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	-242624	+	TSC_hg19_v1_chr18_-_60795898 AF401211	170647	-	BC027258 NM_000633 NM_000657	361272	-	TSC_hg19_v1_chr18_-_60986977 X06487	361705	-	BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2	0.735191	CTCF.p2:23:0.735
chr8	67089223	67089344	reg1009987.p1	10.771	+	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	-49943	+	NM_033105 BC016742 AF368276 AL133660	-155464	+	TSC_hg19_v1_chr8_-_66754300 AK292680	-334991	-	BC002599 BC011031 AK075431 NM_000756	1484	-	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	252023	+	NM_144650 AY033237 AK056992 AK300881 BC047492 BC064634 AK293530 AK300243 AK294114 BC110290	255449	+	AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AK292680|PDE7A|5150|phosphodiesterase 7A##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_144650|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AY033237|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK056992|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300881|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC047492|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC064634|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK293530|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300243|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK294114|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC110290|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1	0.992825	CTCF.p2:-4:0.993
chr8	24749408	24749522	reg1009913.p1	10.770	+	BC058037 AK292492 NM_003817 AF215824 CU691292 AB527100	-450934	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	-507558	+	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	-597858	+	TSC_hg19_v1_chr8_+_24771273 AK296226 BC071752 EF560736 NM_005382	21806	+	EF560737 TSC_hg19_v1_chr8_+_24771276 BC096757 GQ129242 GQ129243 AB527839	21826	+	BC002421 TSC_hg19_v1_chr8_-_24772396 AK308605	22858	-	BC058037|ADAM7|8756|ADAM metallopeptidase domain 7##AK292492|ADAM7|8756|ADAM metallopeptidase domain 7##NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7##AF215824|ADAM7|8756|ADAM metallopeptidase domain 7##NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##AK296226|NEFM|4741|neurofilament, medium polypeptide##BC071752|NEFM|4741|neurofilament, medium polypeptide##EF560736|NEFM|4741|neurofilament, medium polypeptide##NM_005382|NEFM|4741|neurofilament, medium polypeptide##EF560737|NEFM|4741|neurofilament, medium polypeptide##BC096757|NEFM|4741|neurofilament, medium polypeptide##GQ129242|NEFM|4741|neurofilament, medium polypeptide##GQ129243|NEFM|4741|neurofilament, medium polypeptide##BC002421|NEFM|4741|neurofilament, medium polypeptide	0.958648	CTCF.p2:0:0.959
chr10	112440934	112441039	reg1009219.p2	10.769	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-36857	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-96871	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-113494	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	190626	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	190728	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	237710	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.609913	CTCF.p2:-1:0.610
chr19	10330442	10330612	reg1009989.p2	10.769	+	TSC_hg19_v1_chr19_-_10305646 BC126227 BC144093 NM_001130823 NM_001379 AF180682 X63692	-24800	-	TSC_hg19_v1_chr19_-_10305600 BC092517	-24922	-	AB209413 TSC_hg19_v1_chr19_-_10305579	-24970	-	NM_004230 TSC_hg19_v1_chr19_-_10342058	11479	-	TSC_hg19_v1_chr19_+_10362680 NM_015956 NM_146387 NM_146388 AF132962 BC000756	32120	+	TSC_hg19_v1_chr19_+_10362889 BC009858	32371	+	BC126227|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC144093|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001130823|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001379|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##AF180682|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##X63692|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC092517|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##AB209413|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_004230|S1PR2|9294|sphingosine-1-phosphate receptor 2##NM_015956|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146387|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146388|MRPL4|51073|mitochondrial ribosomal protein L4##AF132962|MRPL4|51073|mitochondrial ribosomal protein L4##BC000756|MRPL4|51073|mitochondrial ribosomal protein L4##BC009858|MRPL4|51073|mitochondrial ribosomal protein L4	0.151283	
chr19	17403749	17403855	reg1008346.p2	10.768	+	AK303628 NM_152363	-11349	+	TSC_hg19_v1_chr19_+_17378266 AK000578 BC091491 BC000788	-25508	+	TSC_hg19_v1_chr19_+_17378251 AK308590 AK299493 NM_001033549 NM_014173 AF161491 AK025970 AK301193 BC006244 AL136692 AK225047	-25597	+	BC020173 BC039087 TSC_hg19_v1_chr19_-_17414209 BC007895 AK225140 AK315366 AK021805 AK225340 AK298251 NM_024527	10380	-	BC021801 NM_023937 TSC_hg19_v1_chr19_+_17416677 AB049652 BC000071	12789	+	TSC_hg19_v1_chr19_+_17420345 NM_024050	16479	+	AK303628|ANKLE1|126549|ankyrin repeat and LEM domain containing 1##NM_152363|ANKLE1|126549|ankyrin repeat and LEM domain containing 1##AK000578|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC091491|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC000788|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK308590|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK299493|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_001033549|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_014173|BABAM1|29086|BRISC and BRCA1 A complex member 1##AF161491|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK025970|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK301193|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC006244|BABAM1|29086|BRISC and BRCA1 A complex member 1##AL136692|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK225047|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC020173|ABHD8|79575|abhydrolase domain containing 8##BC039087|ABHD8|79575|abhydrolase domain containing 8##BC007895|ABHD8|79575|abhydrolase domain containing 8##AK225140|ABHD8|79575|abhydrolase domain containing 8##AK315366|ABHD8|79575|abhydrolase domain containing 8##AK021805|ABHD8|79575|abhydrolase domain containing 8##AK225340|ABHD8|79575|abhydrolase domain containing 8##AK298251|ABHD8|79575|abhydrolase domain containing 8##NM_024527|ABHD8|79575|abhydrolase domain containing 8##BC021801|MRPL34|64981|mitochondrial ribosomal protein L34##NM_023937|MRPL34|64981|mitochondrial ribosomal protein L34##AB049652|MRPL34|64981|mitochondrial ribosomal protein L34##BC000071|MRPL34|64981|mitochondrial ribosomal protein L34##NM_024050|DDA1|79016|DET1 and DDB1 associated 1	0.060865	
chr6	75918768	75918892	reg1009983.p1	10.768	+	TSC_hg19_v1_chr6_-_75915768 AK307558	-3050	-	BC146868 U73778 NM_004370 NM_080645 TSC_hg19_v1_chr6_-_75915745	-3175	-	TSC_hg19_v1_chr6_+_74406033 AY149920	-1512806	+	CR407646 CR542125 X15822 TSC_hg19_v1_chr6_-_75953494 BC101826 BC101828 AK312154	34649	-	TSC_hg19_v1_chr6_-_75953518 NM_001865	34747	-	AJ420517 TSC_hg19_v1_chr6_-_75965925	47056	-	AK307558|COL12A1|1303|collagen, type XII, alpha 1##BC146868|COL12A1|1303|collagen, type XII, alpha 1##U73778|COL12A1|1303|collagen, type XII, alpha 1##NM_004370|COL12A1|1303|collagen, type XII, alpha 1##NM_080645|COL12A1|1303|collagen, type XII, alpha 1##AY149920|CD109|135228|CD109 molecule##CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##NM_001865|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AJ420517|TMEM30A|55754|transmembrane protein 30A	0.761225	CTCF.p2:13:0.761
chr4	9533820	9533942	reg1011369.p1	10.767	+	AF529414 NM_001040448	-87622	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-169028	+	AF544012 BC100991 NM_001105662	-173773	+	NM_000798	249376	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	489243	-	AK310895 BC018897 NM_001001290 AK096819	508041	-	AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF544012|USP17|391627|ubiquitin specific peptidase 17##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_000798|DRD5|1816|dopamine receptor D5##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.999894	CTCF.p2:-5:1.000
chr1	165373243	165373381	reg1011988.p1	10.765	+	AK127724 NM_177398	-47361	-	AK122800 NM_001174069	-47837	-	TSC_hg19_v1_chr1_+_164818083 AK022520	-555189	+	AB593016 AK312922 NM_006917	41233	-	TSC_hg19_v1_chr1_+_165513441 NM_001005214 BC132981 BC132983	140160	+	NM_004528	226797	+	AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AB593016|RXRG|6258|retinoid X receptor, gamma##AK312922|RXRG|6258|retinoid X receptor, gamma##NM_006917|RXRG|6258|retinoid X receptor, gamma##NM_001005214|LRRC52|440699|leucine rich repeat containing 52##BC132981|LRRC52|440699|leucine rich repeat containing 52##BC132983|LRRC52|440699|leucine rich repeat containing 52##NM_004528|MGST3|4259|microsomal glutathione S-transferase 3	0.02394	
chr19	42044288	42044398	reg1010948.p1	10.765	+	NM_001130514	-95281	+	TSC_hg19_v1_chr19_-_41945831 AK298197 NM_001167869 NM_001167870 NM_001167871 NM_018035	-98510	-	TSC_hg19_v1_chr19_-_41945814 BC013323 AK316313	-98529	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	38234	+	D90276 AK298701 NM_001817	89091	-	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	147809	-	NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##AK298197|ATP5SL|55101|ATP5S-like##NM_001167869|ATP5SL|55101|ATP5S-like##NM_001167870|ATP5SL|55101|ATP5S-like##NM_001167871|ATP5SL|55101|ATP5S-like##NM_018035|ATP5SL|55101|ATP5S-like##BC013323|ATP5SL|55101|ATP5S-like##AK316313|ATP5SL|55101|ATP5S-like##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7	0.981512	CTCF.p2:8:0.982
chr4	1261857	1261978	reg1007035.p2	10.765	+	TSC_hg19_v1_chr4_+_1243060 AK125775 AK056133	-18749	+	TSC_hg19_v1_chr4_-_1242910 BC072021 BC053320 NM_001012614 NM_001328 BC098400	-19009	-	AB527760 DQ891918 DQ895102 TSC_hg19_v1_chr4_-_1242878 AF091555 BC011655 U37408	-19107	-	TSC_hg19_v1_chr4_+_1283678 BC001225 NM_001017405 NM_005882 AK001088 AK022586 AK094253 AK300572	21753	+	TSC_hg19_v1_chr4_+_1283693 AK296174 AK022515 AY236486 AK308901 AF084928 BC006470 AY189687 BT006957	21789	+	TSC_hg19_v1_chr4_+_1341031 BC110331 AB040963 NM_020894 BC140901	79351	+	AK125775|C4orf42|92070|chromosome 4 open reading frame 42##AK056133|C4orf42|92070|chromosome 4 open reading frame 42##BC072021|CTBP1|1487|C-terminal binding protein 1##BC053320|CTBP1|1487|C-terminal binding protein 1##NM_001012614|CTBP1|1487|C-terminal binding protein 1##NM_001328|CTBP1|1487|C-terminal binding protein 1##BC098400|CTBP1|1487|C-terminal binding protein 1##DQ891918|CTBP1|1487|C-terminal binding protein 1##DQ895102|CTBP1|1487|C-terminal binding protein 1##AF091555|CTBP1|1487|C-terminal binding protein 1##BC011655|CTBP1|1487|C-terminal binding protein 1##U37408|CTBP1|1487|C-terminal binding protein 1##BC001225|MAEA|10296|macrophage erythroblast attacher##NM_001017405|MAEA|10296|macrophage erythroblast attacher##NM_005882|MAEA|10296|macrophage erythroblast attacher##AK001088|MAEA|10296|macrophage erythroblast attacher##AK022586|MAEA|10296|macrophage erythroblast attacher##AK094253|MAEA|10296|macrophage erythroblast attacher##AK300572|MAEA|10296|macrophage erythroblast attacher##AK296174|MAEA|10296|macrophage erythroblast attacher##AK022515|MAEA|10296|macrophage erythroblast attacher##AY236486|MAEA|10296|macrophage erythroblast attacher##AK308901|MAEA|10296|macrophage erythroblast attacher##AF084928|MAEA|10296|macrophage erythroblast attacher##BC006470|MAEA|10296|macrophage erythroblast attacher##AY189687|MAEA|10296|macrophage erythroblast attacher##BT006957|MAEA|10296|macrophage erythroblast attacher##BC110331|KIAA1530|57654|KIAA1530##AB040963|KIAA1530|57654|KIAA1530##NM_020894|KIAA1530|57654|KIAA1530##BC140901|KIAA1530|57654|KIAA1530	0.694154	CTCF.p2:18:0.694
chr11	13260585	13260720	reg1011298.p1	10.764	+	TSC_hg19_v1_chr11_+_13030883 NM_001080521	-229728	+	TSC_hg19_v1_chr11_+_12960793 AK075236	-299841	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	-564689	+	TSC_hg19_v1_chr11_+_13299288 NM_001030272 NM_001030273 NM_001178	38640	+	TSC_hg19_v1_chr11_+_13299331 AK315174	38680	+	BC041129 TSC_hg19_v1_chr11_+_13299351 AK291510	38706	+	NM_001080521|RASSF10|644943|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_001030272|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001030273|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001178|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK315174|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##BC041129|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK291510|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like	0.028081	
chr2	64715257	64715371	reg1010460.p1	10.764	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	-33666	+	TSC_hg19_v1_chr2_+_64681295 NM_014181	-34014	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-343790	-	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	36170	+	TSC_hg19_v1_chr2_+_64751580 AL833962	36288	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	165535	-	BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##AL833962|AFTPH|54812|aftiphilin##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2	0.991877	CTCF.p2:-13:0.992
chr5	113014787	113014877	reg1007809.p1	10.763	+	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	-165436	+	AK128596 NM_001085377	-190306	-	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	-244200	-	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	683217	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	683629	+	BC015371 NM_170775 BC040722	754417	+	AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2##AK128596|MCC|4163|mutated in colorectal cancers##NM_001085377|MCC|4163|mutated in colorectal cancers##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	0.893733	CTCF.p2:-18:0.894
chr11	36694484	36694611	reg1008249.p1	10.762	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-74745	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-78443	+	NM_000448 M29474	-104979	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	3620047	-	AB046800 NM_020929	3621116	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	6638971	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.880713	CTCF.p2:22:0.881
chr16	82673450	82673572	reg1011217.p1	10.762	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-12842	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	-12922	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	-13117	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	1168089	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	1168145	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	1259258	+	AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase	0.999356	CTCF.p2:2:0.999
chr6	20529493	20529593	reg1007557.p2	10.762	+	CR749285 NM_001243076	-125510	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-127440	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	-316871	-	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	5180	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	1064829	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	1137116	+	CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340	0.909264	CTCF.p2:-29:0.909
chr7	140026180	140026285	reg1009701.p1	10.762	+	TSC_hg19_v1_chr7_+_139877154 AK026372	-149076	+	TSC_hg19_v1_chr7_-_139876751 AB528281 AK131497 NM_030647	-149370	-	BC081541 NM_022750	-262712	-	AL136583 AL136583 TSC_hg19_v1_chr7_-_140098295 AK299276 BC028380 BC028380 BC046567 BC046567 AK296543 AK300265 AK074823 AK074823 NM_032295 NM_207113	72067	-	NM_001008749	77610	+	TSC_hg19_v1_chr7_-_140179165 AB209298 AB527778 DQ892404 EU176516 BC064838 AM236048 BC037400 BC051821 BC012398 AK297361 AK315552	152930	-	AK026372|LOC100134229|100134229|uncharacterized LOC100134229##AK131497|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)##NM_030647|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)##BC081541|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##NM_022750|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK299276|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK296543|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK300265|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_032295|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_207113|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_001008749|RAB19|401409|RAB19, member RAS oncogene family##AB209298|MKRN1|23608|makorin ring finger protein 1##DQ892404|MKRN1|23608|makorin ring finger protein 1##EU176516|MKRN1|23608|makorin ring finger protein 1##BC064838|MKRN1|23608|makorin ring finger protein 1##AM236048|MKRN1|23608|makorin ring finger protein 1##BC037400|MKRN1|23608|makorin ring finger protein 1##BC051821|MKRN1|23608|makorin ring finger protein 1##BC012398|MKRN1|23608|makorin ring finger protein 1##AK297361|MKRN1|23608|makorin ring finger protein 1##AK315552|MKRN1|23608|makorin ring finger protein 1	0.157275	
chr9	32432095	32432218	reg1011679.p1	10.762	+	TSC_hg19_v1_chr9_+_32384682 BC018103	-47467	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	-47507	+	TSC_hg19_v1_chr9_+_32384622 AK057904	-47529	+	AB385150 TSC_hg19_v1_chr9_-_32526215 AK301678 AK315040 BX647917 BC070029 BC132786 BC136610 AF038963 NM_014314 BC107731	94096	-	U82939 TSC_hg19_v1_chr9_-_32550876	118707	-	AB045732 AB045733 AF098300 TSC_hg19_v1_chr9_-_32552567 BC060884	120403	-	BC018103|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK301678|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58##AK315040|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58##BX647917|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58##BC070029|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58##BC132786|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58##BC136610|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58##AF038963|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58##NM_014314|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58##BC107731|DDX58|23586|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58##U82939|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AB045732|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AB045733|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AF098300|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##BC060884|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase	0.050348	
chrX	123522584	123522687	reg1005784.p1	10.762	+	NM_001114937 NM_002351 AL023657 AK311645	-42460	+	AK026678 TSC_hg19_v1_chrX_+_123234596	-288105	+	TSC_hg19_v1_chrX_+_123095638 BC001765	-426998	+	HE578281 BC140783 BC144542 BC144543 AF100772 NM_001163278 NM_001163279 NM_014253	574998	-	NM_001195272	931333	+	BC136673 BC136674 NM_001013628	1777444	-	NM_001114937|SH2D1A|4068|SH2 domain containing 1A##NM_002351|SH2D1A|4068|SH2 domain containing 1A##AL023657|SH2D1A|4068|SH2 domain containing 1A##AK311645|SH2D1A|4068|SH2 domain containing 1A##AK026678|STAG2|10735|stromal antigen 2##BC001765|STAG2|10735|stromal antigen 2##BC140783|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144542|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144543|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##AF100772|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163278|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163279|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_014253|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001195272|LOC100129520|100129520|testis expressed sequence 13-like##BC136673|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##BC136674|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##NM_001013628|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2	0.999871	CTCF.p2:-18:1.000
chr2	162129784	162129902	reg1009608.p1	10.758	+	TSC_hg19_v1_chr2_+_162016938 AK313096 NM_001199135 BC067779	-112894	+	NM_004180 NM_133484 U59863 U63830	-136378	+	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	-779526	-	NM_005805 TSC_hg19_v1_chr2_+_162164936 BC066336	35019	+	TSC_hg19_v1_chr2_+_162164996 U86782	35180	+	NM_006593 BC104844 BC113418 TSC_hg19_v1_chr2_+_162272726	142838	+	AK313096|TANK|10010|TRAF family member-associated NFKB activator##NM_001199135|TANK|10010|TRAF family member-associated NFKB activator##BC067779|TANK|10010|TRAF family member-associated NFKB activator##NM_004180|TANK|10010|TRAF family member-associated NFKB activator##NM_133484|TANK|10010|TRAF family member-associated NFKB activator##U59863|TANK|10010|TRAF family member-associated NFKB activator##U63830|TANK|10010|TRAF family member-associated NFKB activator##BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_005805|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##BC066336|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##U86782|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##NM_006593|TBR1|10716|T-box, brain, 1##BC104844|TBR1|10716|T-box, brain, 1##BC113418|TBR1|10716|T-box, brain, 1	0.996255	CTCF.p2:7:0.996
chr7	152520582	152520701	reg1008784.p2	10.758	+	TSC_hg19_v1_chr7_+_152456872 NM_001040135 NM_020445 AK315534 BC008682 AK294292 AK316078 AF086920 BC015207 AF023453 CU677239 CU679037 DQ894754 EU176295	-63748	+	AB590731 CU692064 TSC_hg19_v1_chr7_-_152373227 BC042137 AK313607 Y08837 AF035587 NM_005431	-147433	-	TSC_hg19_v1_chr7_+_152161285 BC036622	-359402	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	1063759	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	1229117	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	1481744	+	NM_001040135|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##NM_020445|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK315534|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC008682|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK294292|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK316078|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF086920|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC015207|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF023453|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##DQ894754|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##EU176295|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC042137|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AK313607|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##Y08837|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AF035587|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##NM_005431|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##BC036622|LOC100128822|100128822|uncharacterized LOC100128822##BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6	0.049769	
chr8	103209726	103209856	reg1008154.p1	10.758	+	NM_001040630	-72657	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	-73268	-	NM_032041	-406353	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	41382	-	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	215120	-	NM_024410 AK315276 BC104456 BC104457	354070	+	NM_001040630|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_032041|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1	0.029353	
chr1	1225673	1225778	reg1010348.p1	10.757	+	NM_001130413 BC040882 AK127357	-9834	+	TSC_hg19_v1_chr1_+_1209415 DQ898177	-16325	+	TSC_hg19_v1_chr1_-_1209229 BC094777 NM_058167 NM_194315 NM_194457 NM_194458	-16495	-	TSC_hg19_v1_chr1_-_1243285 BC051194 NM_030649	17666	-	TSC_hg19_v1_chr1_+_1243987 AK075292 BC034304 NM_153339 AK298218	18273	+	AB463529 AM393218 CR533557 AK056652 AK022675 TSC_hg19_v1_chr1_-_1260041 BC042444 AK092190 AK297350 BC008041 BC020199 BC007978 AK291387 AK021939 AK058018 AL136813 NM_017871 AK023356 AK027767	34299	-	NM_001130413|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##BC040882|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##AK127357|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##BC094777|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_058167|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194315|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194457|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194458|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##BC051194|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3##NM_030649|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3##AK075292|PUSL1|126789|pseudouridylate synthase-like 1##BC034304|PUSL1|126789|pseudouridylate synthase-like 1##NM_153339|PUSL1|126789|pseudouridylate synthase-like 1##AK298218|PUSL1|126789|pseudouridylate synthase-like 1##AM393218|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##CR533557|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK056652|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK022675|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC042444|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK092190|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK297350|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC008041|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC020199|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC007978|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK291387|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK021939|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK058018|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AL136813|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##NM_017871|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK023356|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK027767|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like	0.66917	CTCF.p2:-4:0.669
chr1	24716676	24716805	reg1009820.p2	10.757	+	AY231160 AY231161 NM_021180	-67211	+	AK074386 TSC_hg19_v1_chr1_+_24645958 AK315164 BC036890 NM_001195010	-70756	+	NM_198173 NM_198174 TSC_hg19_v1_chr1_+_24645846	-70912	+	TSC_hg19_v1_chr1_-_24740273 AK090659 AK299401 AX746563 BC035061 NM_001199013 NM_001199014 NM_178122	23482	-	BC040212 NM_001199012	24846	-	NM_020448 TSC_hg19_v1_chr1_+_24742291 AK312433 BX640883 BC012492 BC001265 BC063583 U90918	25563	+	AY231160|GRHL3|57822|grainyhead-like 3 (Drosophila)##AY231161|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_021180|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK074386|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK315164|GRHL3|57822|grainyhead-like 3 (Drosophila)##BC036890|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_001195010|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_198173|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_198174|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK299401|C1orf201|90529|chromosome 1 open reading frame 201##BC035061|C1orf201|90529|chromosome 1 open reading frame 201##NM_001199013|C1orf201|90529|chromosome 1 open reading frame 201##NM_001199014|C1orf201|90529|chromosome 1 open reading frame 201##NM_178122|C1orf201|90529|chromosome 1 open reading frame 201##BC040212|C1orf201|90529|chromosome 1 open reading frame 201##NM_001199012|C1orf201|90529|chromosome 1 open reading frame 201##NM_020448|NIPAL3|57185|NIPA-like domain containing 3##AK312433|NIPAL3|57185|NIPA-like domain containing 3##BX640883|NIPAL3|57185|NIPA-like domain containing 3##BC012492|NIPAL3|57185|NIPA-like domain containing 3##BC001265|NIPAL3|57185|NIPA-like domain containing 3##BC063583|NIPAL3|57185|NIPA-like domain containing 3##U90918|NIPAL3|57185|NIPA-like domain containing 3	0.683	CTCF.p2:3:0.683
chr2	55945445	55945573	reg1011938.p1	10.757	+	TSC_hg19_v1_chr2_-_55920980 BC053660 BC009057 AK027437 AY027528 AK307589 AJ458465 NM_033109	-24531	-	TSC_hg19_v1_chr2_-_55846016 AK056503	-99491	-	TSC_hg19_v1_chr2_-_55844909 BC045714	-100598	-	TSC_hg19_v1_chr2_-_56150918 AK301531 BC014410 BC098561 AK301402 AK312639 AK092854 AK290599 AX747769	205406	-	AK293058 NM_001039348 NM_001039349	205776	-	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	465696	+	BC053660|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##BC009057|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AY027528|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AK307589|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AJ458465|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##NM_033109|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AK056503|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##BC045714|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##AK301531|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC014410|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC098561|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301402|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK312639|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK092854|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK290599|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A	0.998184	CTCF.p2:-5:0.998
chr5	114582214	114582330	reg1008882.p2	10.757	+	AB196558 AJ272269 BC130334 AK125426 BC045164 BC046096 NM_001017397 NM_001017398 NM_018700	-66285	-	TSC_hg19_v1_chr5_-_114505606 AK316422 AK296389	-76668	-	BC015371 NM_170775 BC040722	-813023	+	AY780790 AB590094 TSC_hg19_v1_chr5_-_114598563 NM_005023	16294	-	BC031242 AK307327 NM_152549	49703	-	AB587510 AJ580807 NM_001040440	50076	-	AB196558|TRIM36|55521|tripartite motif containing 36##AJ272269|TRIM36|55521|tripartite motif containing 36##BC130334|TRIM36|55521|tripartite motif containing 36##AK125426|TRIM36|55521|tripartite motif containing 36##BC045164|TRIM36|55521|tripartite motif containing 36##BC046096|TRIM36|55521|tripartite motif containing 36##NM_001017397|TRIM36|55521|tripartite motif containing 36##NM_001017398|TRIM36|55521|tripartite motif containing 36##NM_018700|TRIM36|55521|tripartite motif containing 36##AK316422|TRIM36|55521|tripartite motif containing 36##AK296389|TRIM36|55521|tripartite motif containing 36##BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY780790|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##NM_005023|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##BC031242|CCDC112|153733|coiled-coil domain containing 112##NM_152549|CCDC112|153733|coiled-coil domain containing 112##AJ580807|CCDC112|153733|coiled-coil domain containing 112##NM_001040440|CCDC112|153733|coiled-coil domain containing 112	0.699883	CTCF.p2:5:0.700
chr6	119469827	119469972	reg1011813.p1	10.757	+	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-69991	-	CU687406 AB385245 EU832813 GQ129264 TSC_hg19_v1_chr6_-_119399478	-70475	-	TSC_hg19_v1_chr6_-_119256325 NM_153255	-213572	-	BX538186 AK091682 AX747126 NM_001100411	447	-	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	201022	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	2185744	-	BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##EU832813|FAM184A|79632|family with sequence similarity 184, member A##GQ129264|FAM184A|79632|family with sequence similarity 184, member A##NM_153255|MCM9|254394|minichromosome maintenance complex component 9##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170	0.990847	CTCF.p2:-11:0.991
chr7	143824941	143825059	reg1010638.p1	10.757	+	BC136742 NM_001005480	-18360	+	BC136902 BC136903 NM_001004135	-32830	+	BC136814 BC136829 NM_001004488	-53707	+	BC136889 NM_001001659	1177	+	NM_198495 AK292236	55552	+	BC136868 BC136878 EF560743 AK125680 NM_001003702	67719	-	BC136742|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2##NM_001005480|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2##BC136902|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##BC136903|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##NM_001004135|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##BC136814|OR2A25|392138|olfactory receptor, family 2, subfamily A, member 25##BC136829|OR2A25|392138|olfactory receptor, family 2, subfamily A, member 25##NM_001004488|OR2A25|392138|olfactory receptor, family 2, subfamily A, member 25##BC136889|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14##NM_001001659|OR2A14|135941|olfactory receptor, family 2, subfamily A, member 14##NM_198495|CTAGE4|100128553|CTAGE family, member 4##AK292236|CTAGE8|100142659|CTAGE family, member 8##BC136868|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##BC136878|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##EF560743|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##AK125680|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35##NM_001003702|ARHGEF35|445328|Rho guanine nucleotide exchange factor (GEF) 35	0.994533	CTCF.p2:6:0.995
chr10	105644544	105644691	reg1010196.p1	10.756	+	TSC_hg19_v1_chr10_-_105615306 NM_014631	-29347	-	TSC_hg19_v1_chr10_-_105452931 AK294736 AK295314 AK315983 AK295660	-191667	-	TSC_hg19_v1_chr10_-_105437934 AK304828	-206696	-	TSC_hg19_v1_chr10_-_105677943 BC017400	33312	-	TSC_hg19_v1_chr10_-_105677986 NM_024928	33398	-	TSC_hg19_v1_chr10_+_105726926 AK307389	82269	+	NM_014631|SH3PXD2A|9644|SH3 and PX domains 2A##AK294736|SH3PXD2A|9644|SH3 and PX domains 2A##AK295314|SH3PXD2A|9644|SH3 and PX domains 2A##AK315983|SH3PXD2A|9644|SH3 and PX domains 2A##AK295660|SH3PXD2A|9644|SH3 and PX domains 2A##AK304828|SH3PXD2A|9644|SH3 and PX domains 2A##BC017400|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1##NM_024928|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1##AK307389|SLK|9748|STE20-like kinase	0.941361	CTCF.p2:4:0.941
chr5	161103250	161103384	reg1012291.p1	10.756	+	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	-128191	-	AB018258 AK295081 AK090832 AX746642 NM_025153	-824186	-	AK025130 TSC_hg19_v1_chr5_-_160112393	-990978	-	NM_000811	9340	+	AK289792 NM_000806 AK295160	170924	+	NM_001127643	171367	+	BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##AK025130|ATP10B|23120|ATPase, class V, type 10B##NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6##AK289792|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_000806|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK295160|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127643|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	0.0	
chr1	33921545	33921647	reg1007952.p1	10.755	+	TSC_hg19_v1_chr1_-_33896604 AJ242730	-24988	-	AB527842 AJ419231 BC130630 BC144121 NM_198040	-80429	-	NM_004427 TSC_hg19_v1_chr1_-_33815501 U89278	-106088	-	NM_145238 AK131405 TSC_hg19_v1_chr1_+_33938251 AK290195 BC008827 BC011404	16655	+	AK097707 NM_145205	404479	+	TSC_hg19_v1_chr1_-_34630856 AB212622	709269	-	AJ242730|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AJ419231|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC130630|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC144121|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##NM_198040|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##NM_004427|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##U89278|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##NM_145238|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK131405|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK290195|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC008827|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC011404|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK097707|HMGB4|127540|high mobility group box 4##NM_145205|HMGB4|127540|high mobility group box 4##AB212622|CSMD2|114784|CUB and Sushi multiple domains 2	0.94457	CTCF.p2:14:0.945
chr2	217563662	217563799	reg1009890.p1	10.755	+	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-3470	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-4164	-	L27560 AF147308 TSC_hg19_v1_chr2_-_217540846	-22946	-	BC029516 NM_003284	161051	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	1245051	-	AK001785 TSC_hg19_v1_chr2_-_218843551	1279816	-	AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##L27560|IGFBP5|3488|insulin-like growth factor binding protein 5##AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5##BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1	0.0	
chr3	39041583	39041727	reg1012247.p1	10.755	+	AF109737 AF150882 NM_014139	-49604	-	AF117907 NM_006514	-206155	-	M77235 NM_000335 NM_001099404 NM_001099405 NM_198056 BC051374 NM_001160160 NM_001160161	-350515	-	TSC_hg19_v1_chr3_+_39093498 AB040882 AK025513 AK297349 AK298810 AK302307 BC026353 NM_020839 BC037168 AB385469 AF468833 AL832926	51846	+	CU687304 AB527597 TSC_hg19_v1_chr3_-_39149103 BC064624 AK300271 BC103826 BC103827 BC008928	107416	-	TSC_hg19_v1_chr3_-_39149122 BC075854 AK001574 AK057043 AJ409349 NM_031899 AK303847	107471	-	AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF117907|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##NM_006514|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##M77235|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_000335|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099404|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099405|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_198056|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##BC051374|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160160|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160161|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##AB040882|WDR48|57599|WD repeat domain 48##AK025513|WDR48|57599|WD repeat domain 48##AK297349|WDR48|57599|WD repeat domain 48##AK298810|WDR48|57599|WD repeat domain 48##AK302307|WDR48|57599|WD repeat domain 48##BC026353|WDR48|57599|WD repeat domain 48##NM_020839|WDR48|57599|WD repeat domain 48##BC037168|WDR48|57599|WD repeat domain 48##AF468833|WDR48|57599|WD repeat domain 48##AL832926|WDR48|57599|WD repeat domain 48##BC064624|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK300271|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103826|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103827|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC008928|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC075854|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK001574|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK057043|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AJ409349|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##NM_031899|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK303847|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa	1.606735	CTCF.p2:17:0.624	CTCF.p2:-39:0.965
chr16	75498707	75498851	reg1009361.p2	10.754	+	TSC_hg19_v1_chr16_-_75498598 BC018082 NM_145254 AK298475 BX647432 BX648429 BX648484 AK311919	-178	-	AM392693 AM393662 AY302139 CU676164 TSC_hg19_v1_chr16_-_75498577	-241	-	TSC_hg19_v1_chr16_-_75498315 AK094930	-482	-	AF280086 NM_021615	30146	-	TSC_hg19_v1_chr16_-_75529279 AF219990	30500	-	TSC_hg19_v1_chr16_-_75529303 AK311527 AK093904	30518	-	BC018082|TMEM170A|124491|transmembrane protein 170A##NM_145254|TMEM170A|124491|transmembrane protein 170A##AK298475|TMEM170A|124491|transmembrane protein 170A##BX647432|TMEM170A|124491|transmembrane protein 170A##BX648429|TMEM170A|124491|transmembrane protein 170A##BX648484|TMEM170A|124491|transmembrane protein 170A##AK311919|TMEM170A|124491|transmembrane protein 170A##AY302139|TMEM170A|124491|transmembrane protein 170A##AK094930|TMEM170A|124491|transmembrane protein 170A##AF280086|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6##NM_021615|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6	0.413426	CTCF.p2:-26:0.413
chr19	47516354	47516497	reg1009905.p2	10.754	+	AB051509 AF159851 BC131565 BC150257 NM_004491	-94493	+	BC006337 TSC_hg19_v1_chr19_-_47354069 AK312003 NM_004069 NM_021575	-162294	-	AF105230 TSC_hg19_v1_chr19_-_47291850 AB209738 AF105423 NM_005628 U53347 AK292690	-224703	-	TSC_hg19_v1_chr19_+_47523068 BC039016	6651	+	AB054002 NM_002517 U77968	7786	+	AK000519 NM_017854 TSC_hg19_v1_chr19_-_47551883 BC002907	35471	-	AB051509|ARHGAP35|2909|Rho GTPase activating protein 35##AF159851|ARHGAP35|2909|Rho GTPase activating protein 35##BC131565|ARHGAP35|2909|Rho GTPase activating protein 35##BC150257|ARHGAP35|2909|Rho GTPase activating protein 35##NM_004491|ARHGAP35|2909|Rho GTPase activating protein 35##BC006337|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##AK312003|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##NM_004069|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##NM_021575|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##AF105230|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AB209738|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF105423|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_005628|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##U53347|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK292690|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC039016|NPAS1|4861|neuronal PAS domain protein 1##AB054002|NPAS1|4861|neuronal PAS domain protein 1##NM_002517|NPAS1|4861|neuronal PAS domain protein 1##U77968|NPAS1|4861|neuronal PAS domain protein 1##AK000519|TMEM160|54958|transmembrane protein 160##NM_017854|TMEM160|54958|transmembrane protein 160##BC002907|TMEM160|54958|transmembrane protein 160	0.997508	CTCF.p2:-25:0.998
chr20	41159619	41159751	reg1010232.p1	10.754	+	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-912624	-	AB089149 NM_052846	-1164188	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	-1190170	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	658825	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	926807	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	926918	+	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3##AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6	0.979228	CTCF.p2:-3:0.979
chr3	65327903	65328025	reg1012415.p1	10.754	+	TSC_hg19_v1_chr3_-_64673677 BC036770 AK310571	-654278	-	TSC_hg19_v1_chr3_-_64673334 AF261918 BC130578 BC171764 AF488803 NM_182920	-654617	-	AB037733 TSC_hg19_v1_chr3_-_64672299	-655669	-	BC062367 NM_001033057 NM_004742 NM_015520 TSC_hg19_v1_chr3_-_66024518	696549	-	AK092495 AX747571 NM_173471	791320	+	NM_001164796	943203	+	BC036770|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AK310571|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##NM_001164796|SLC25A26|115286|solute carrier family 25, member 26	0.997991	CTCF.p2:-7:0.998
chr5	71690657	71690785	reg1009571.p1	10.754	+	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-74499	+	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	-74519	+	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	-74641	-	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	112462	-	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	421769	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	453220	+	BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1	0.066122	
chr8	81904277	81904415	reg1012470.p1	10.753	+	AK131274 NM_001033723	-117331	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-505862	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-820576	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	119968	-	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	288427	+	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	455323	-	AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2	0.910749	CTCF.p2:12:0.911
chr10	32294015	32294161	reg1012200.p1	10.752	+	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	-76303	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	-76364	-	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-683999	+	TSC_hg19_v1_chr10_-_32344938 AB462413	50844	-	BC126279 BC126281 TSC_hg19_v1_chr10_-_32345152 X65873	51080	-	TSC_hg19_v1_chr10_-_32345335 BC080604 BC010885 BC111042 AK289413 AK299542 BC065267 AK307502	51226	-	AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##BC126279|KIF5B|3799|kinesin family member 5B##BC126281|KIF5B|3799|kinesin family member 5B##X65873|KIF5B|3799|kinesin family member 5B##BC080604|KIF5B|3799|kinesin family member 5B##BC010885|KIF5B|3799|kinesin family member 5B##BC111042|KIF5B|3799|kinesin family member 5B##AK289413|KIF5B|3799|kinesin family member 5B##AK299542|KIF5B|3799|kinesin family member 5B##BC065267|KIF5B|3799|kinesin family member 5B##AK307502|KIF5B|3799|kinesin family member 5B	0.915454	CTCF.p2:12:0.915
chr16	19910807	19910928	reg1010586.p1	10.752	+	AK295204 AF202640 TSC_hg19_v1_chr16_-_19896168 BC034467 AF181862 NM_016235 AK294680 AK075119 AK315989 AK296754	-14703	-	TSC_hg19_v1_chr16_-_19729532 BC117562 NM_001012991	-181380	-	TSC_hg19_v1_chr16_+_19727698 AF520569 AF520570 AK000122 NM_153208	-183130	+	AB196529 AY635179 BC137237 BC137238 BC144547 NM_001002911 AK291384	174220	-	U36221 AK312277 BX647831 BX648201 BX649067 BX648023 NM_001007240 NM_001007241 NM_001007242 NM_001502 CR749600	427986	-	AK127643 AK055722 AK091961 AK096043 AX747279 M15881 BC035975 AK127648 NM_001008389 NM_003361	453165	-	AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC117562|C16orf88|400506|chromosome 16 open reading frame 88##NM_001012991|C16orf88|400506|chromosome 16 open reading frame 88##AF520569|IQCK|124152|IQ motif containing K##AF520570|IQCK|124152|IQ motif containing K##AK000122|IQCK|124152|IQ motif containing K##NM_153208|IQCK|124152|IQ motif containing K##AB196529|GPR139|124274|G protein-coupled receptor 139##AY635179|GPR139|124274|G protein-coupled receptor 139##BC137237|GPR139|124274|G protein-coupled receptor 139##BC137238|GPR139|124274|G protein-coupled receptor 139##NM_001002911|GPR139|124274|G protein-coupled receptor 139##AK291384|GPR139|124274|G protein-coupled receptor 139##U36221|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK312277|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX647831|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648201|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX649067|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648023|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007240|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007241|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007242|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001502|GP2|2813|glycoprotein 2 (zymogen granule membrane)##CR749600|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK127643|UMOD|7369|uromodulin##AK055722|UMOD|7369|uromodulin##AK091961|UMOD|7369|uromodulin##AK096043|UMOD|7369|uromodulin##M15881|UMOD|7369|uromodulin##BC035975|UMOD|7369|uromodulin##AK127648|UMOD|7369|uromodulin##NM_001008389|UMOD|7369|uromodulin##NM_003361|UMOD|7369|uromodulin	0.16187	
chr17	80921205	80921322	reg1008654.p1	10.752	+	BC109036 BC109037 AK301690 AK023903 NM_024702	-123354	-	TSC_hg19_v1_chr17_+_80710051 AJ006417 DQ891885 EU176650	-211215	+	TSC_hg19_v1_chr17_+_80710000 AK091959 AX747278	-211255	+	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	85207	-	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	88406	-	TSC_hg19_v1_chr17_+_81037508 BC082252 NM_001004431 BC118558 BC118638	116279	+	BC109036|ZNF750|79755|zinc finger protein 750##BC109037|ZNF750|79755|zinc finger protein 750##AK301690|ZNF750|79755|zinc finger protein 750##AK023903|ZNF750|79755|zinc finger protein 750##NM_024702|ZNF750|79755|zinc finger protein 750##AJ006417|TBCD|6904|tubulin folding cofactor D##DQ891885|TBCD|6904|tubulin folding cofactor D##EU176650|TBCD|6904|tubulin folding cofactor D##AK091959|TBCD|6904|tubulin folding cofactor D##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like##NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like	0.093158	
chr1	147817900	147818003	reg1009147.p1	10.751	+	AL832622 TSC_hg19_v1_chr1_-_147624600	-193351	-	TSC_hg19_v1_chr1_-_147624593 BC136292 NM_183372	-193435	-	BX648497 TSC_hg19_v1_chr1_-_147624379	-193606	-	BC099898 BC071624 AK097058 AK310056 TSC_hg19_v1_chr1_-_147931936 AK310186 AK309393	113977	-	BC130376 BC130378 AB084917 NM_001143883 NM_178230	137446	-	AL117237 NM_015383 BC094705	207903	-	AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##BX648497|NBPF11|200030|neuroblastoma breakpoint family, member 11##BC071624|FLJ39739|388685|uncharacterized FLJ39739##AK097058|FLJ39739|388685|uncharacterized FLJ39739##AK310056|FLJ39739|388685|uncharacterized FLJ39739##AK310186|FLJ39739|388685|uncharacterized FLJ39739##AK309393|FLJ39739|388685|uncharacterized FLJ39739##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##AL117237|NBPF14|25832|neuroblastoma breakpoint family, member 14##NM_015383|NBPF14|25832|neuroblastoma breakpoint family, member 14##BC094705|NBPF1|55672|neuroblastoma breakpoint family, member 1	0.943269	CTCF.p2:-12:0.943
chr1	204400579	204400687	reg1008871.p2	10.751	+	TSC_hg19_v1_chr1_-_204380946 BC065280 AK222877 NM_032833 AK027650 AK303535 AK316092	-19693	-	TSC_hg19_v1_chr1_+_204380508 BC009873	-20112	+	AB023186 BC152475 NM_014935 TSC_hg19_v1_chr1_-_204329058	-71583	-	BC132876 BC136645 BC144342 NM_002646 AK308153	58865	-	TSC_hg19_v1_chr1_-_204463934 BC094741	63132	-	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	84869	+	BC065280|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK222877|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_032833|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK027650|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK303535|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AB023186|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC152475|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##NM_014935|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC132876|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC136645|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC144342|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_002646|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AK308153|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	0.993072	CTCF.p2:1:0.993
chr12	126168458	126168592	reg1009377.p2	10.751	+	NM_052907	-357364	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-618457	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-618584	+	NM_001136103	2583422	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	3139918	-	BC043528 TSC_hg19_v1_chr12_+_129337985	3169459	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.986492	CTCF.p2:-32:0.986
chr22	27061555	27061694	reg1010736.p1	10.751	+	TSC_hg19_v1_chr22_+_27053392 AB263414 AB263415 AB263416 AB263417 AK098833	-8152	+	BC069404 CR456424 NM_001886 U59057 AB528112 CU012985 CU013273 BC096171 BC096172 BC096173 BC096174	-43693	+	BC036790 TSC_hg19_v1_chr22_-_27014064	-47562	-	TSC_hg19_v1_chr22_+_27068725 AK026502	7116	+	TSC_hg19_v1_chr22_-_28197481 NM_002430 X82209	1135853	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	1253550	-	AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##BC069404|CRYBA4|1413|crystallin, beta A4##CR456424|CRYBA4|1413|crystallin, beta A4##NM_001886|CRYBA4|1413|crystallin, beta A4##U59057|CRYBA4|1413|crystallin, beta A4##CU012985|CRYBA4|1413|crystallin, beta A4##CU013273|CRYBA4|1413|crystallin, beta A4##BC096171|CRYBA4|1413|crystallin, beta A4##BC096172|CRYBA4|1413|crystallin, beta A4##BC096173|CRYBA4|1413|crystallin, beta A4##BC096174|CRYBA4|1413|crystallin, beta A4##BC036790|CRYBB1|1414|crystallin, beta B1##AK026502|LOC100507637|100507637|uncharacterized LOC100507637##NM_002430|MN1|4330|meningioma (disrupted in balanced translocation) 1##X82209|MN1|4330|meningioma (disrupted in balanced translocation) 1##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta	0.956495	CTCF.p2:5:0.956
chr2	95719453	95719610	reg1011004.p1	10.751	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	-28049	+	AK097438 BC021716 NM_144705 AK296678 CU692394	-182281	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3871528	-	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	68011	-	AB049940 TSC_hg19_v1_chr2_-_95787749 BC014172 NM_031902	68181	-	AK027363 NM_032788	105731	-	BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5##AB049940|MRPS5|64969|mitochondrial ribosomal protein S5##BC014172|MRPS5|64969|mitochondrial ribosomal protein S5##NM_031902|MRPS5|64969|mitochondrial ribosomal protein S5##AK027363|ZNF514|84874|zinc finger protein 514##NM_032788|ZNF514|84874|zinc finger protein 514	0.0	
chr14	95827896	95828028	reg1010238.p2	10.750	+	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	-41779	-	TSC_hg19_v1_chr14_+_95624023 BC040596	-203941	+	TSC_hg19_v1_chr14_-_95623867 BC046934 AB023145 BC150287 NM_177438	-204170	-	AK131436 BC146604 BX248076 NM_152592	114142	-	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	173053	-	TSC_hg19_v1_chr14_+_96001352 NM_016417	173364	+	AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC046934|DICER1|23405|dicer 1, ribonuclease type III##AB023145|DICER1|23405|dicer 1, ribonuclease type III##BC150287|DICER1|23405|dicer 1, ribonuclease type III##NM_177438|DICER1|23405|dicer 1, ribonuclease type III##AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##NM_016417|GLRX5|51218|glutaredoxin 5	0.999366	CTCF.p2:2:0.999
chr19	59092625	59092746	reg1009542.p2	10.750	+	TSC_hg19_v1_chr19_+_59086818 BC065480 BC067232 BC043401 AK000827 AK311347 BC000766 BC001952	-5864	+	TSC_hg19_v1_chr19_-_59084939 AF055077 AF055078 NM_003422 NM_198055	-7737	-	TSC_hg19_v1_chr19_-_59084737 BC007777	-7855	-	None	None	None	None	None	None	None	None	None	BC065480|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##BC067232|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##BC043401|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##AK000827|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##AK311347|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##BC000766|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##BC001952|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##AF055077|MZF1|7593|myeloid zinc finger 1##AF055078|MZF1|7593|myeloid zinc finger 1##NM_003422|MZF1|7593|myeloid zinc finger 1##NM_198055|MZF1|7593|myeloid zinc finger 1##BC007777|MZF1|7593|myeloid zinc finger 1	0.199767	
chr6_mann_hap4	2909340	2909466	reg1012332.p1	10.750	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999083	CTCF.p2:8:0.999
chr6	33575650	33575759	reg1008060.p2	10.749	+	TSC_hg19_v1_chr6_-_33548037 AK303422 AK293547 NM_001188	-27661	-	U23765 U16811 TSC_hg19_v1_chr6_-_33547998 X84213 BC004431 BC032789 BC110337 AK091807 AK292093	-27789	-	TSC_hg19_v1_chr6_+_33422352 AK313571 AK122644 NM_152735 BC014978	-153332	+	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	13490	+	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	103759	-	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	103809	-	AK303422|BAK1|578|BCL2-antagonist/killer 1##AK293547|BAK1|578|BCL2-antagonist/killer 1##NM_001188|BAK1|578|BCL2-antagonist/killer 1##U23765|BAK1|578|BCL2-antagonist/killer 1##U16811|BAK1|578|BCL2-antagonist/killer 1##X84213|BAK1|578|BCL2-antagonist/killer 1##BC004431|BAK1|578|BCL2-antagonist/killer 1##BC032789|BAK1|578|BCL2-antagonist/killer 1##BC110337|BAK1|578|BCL2-antagonist/killer 1##AK091807|BAK1|578|BCL2-antagonist/killer 1##AK292093|BAK1|578|BCL2-antagonist/killer 1##AK313571|ZBTB9|221504|zinc finger and BTB domain containing 9##AK122644|ZBTB9|221504|zinc finger and BTB domain containing 9##NM_152735|ZBTB9|221504|zinc finger and BTB domain containing 9##BC014978|ZBTB9|221504|zinc finger and BTB domain containing 9##D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125	0.327048	CTCF.p2:8:0.327
chr1	3535690	3535816	reg1009719.p2	10.748	+	AB231860 NM_001409	-7695	-	TSC_hg19_v1_chr1_-_3447976 AB011539	-87761	-	AK310408 TSC_hg19_v1_chr1_+_3388187 AK296150	-147569	+	TSC_hg19_v1_chr1_+_3541565 NM_182752 AK096427	5811	+	AK298343 TSC_hg19_v1_chr1_+_3541608 AK289919 BC019034	5856	+	CU678066 AB034912 AK000437 AK225525 BC002611 BC086311 TSC_hg19_v1_chr1_-_3566668 AK302397 NM_017818	30863	-	AB231860|MEGF6|1953|multiple EGF-like-domains 6##NM_001409|MEGF6|1953|multiple EGF-like-domains 6##AB011539|MEGF6|1953|multiple EGF-like-domains 6##AK310408|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK296150|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##NM_182752|TPRG1L|127262|tumor protein p63 regulated 1-like##AK096427|TPRG1L|127262|tumor protein p63 regulated 1-like##AK298343|TPRG1L|127262|tumor protein p63 regulated 1-like##AK289919|TPRG1L|127262|tumor protein p63 regulated 1-like##BC019034|TPRG1L|127262|tumor protein p63 regulated 1-like##AB034912|WRAP73|49856|WD repeat containing, antisense to TP73##AK000437|WRAP73|49856|WD repeat containing, antisense to TP73##AK225525|WRAP73|49856|WD repeat containing, antisense to TP73##BC002611|WRAP73|49856|WD repeat containing, antisense to TP73##BC086311|WRAP73|49856|WD repeat containing, antisense to TP73##AK302397|WRAP73|49856|WD repeat containing, antisense to TP73##NM_017818|WRAP73|49856|WD repeat containing, antisense to TP73	0.995498	CTCF.p2:3:0.995
chr18	59169848	59169993	reg1009136.p1	10.748	+	AF217289 BC101047 BC101048 BC101049 NM_031891	-12146	+	AK314130 NM_005912	-1129920	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-1602691	+	AK096495 NM_173557	390383	-	AF109219 TSC_hg19_v1_chr18_-_59854208	684274	-	TSC_hg19_v1_chr18_-_59854227 BC028363	684301	-	AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##BC028363|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.948175	CTCF.p2:4:0.948
chr2	47562300	47562411	reg1007833.p1	10.747	+	TSC_hg19_v1_chr2_-_47403685 NM_001743	-158646	-	TSC_hg19_v1_chr2_-_47403656 BC008437	-158701	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	-158705	-	NM_002354 TSC_hg19_v1_chr2_+_47596376	33987	+	TSC_hg19_v1_chr2_+_47596449 AK026585 BC014785 M26481 M32325 X14758 M33011 M32306 DQ891338 DQ894520 CR542259 CR542283	34190	+	TSC_hg19_v1_chr2_+_47630218 AK304496	67849	+	NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC008437|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##NM_002354|EPCAM|4072|epithelial cell adhesion molecule##AK026585|EPCAM|4072|epithelial cell adhesion molecule##BC014785|EPCAM|4072|epithelial cell adhesion molecule##M26481|EPCAM|4072|epithelial cell adhesion molecule##M32325|EPCAM|4072|epithelial cell adhesion molecule##X14758|EPCAM|4072|epithelial cell adhesion molecule##M33011|EPCAM|4072|epithelial cell adhesion molecule##M32306|EPCAM|4072|epithelial cell adhesion molecule##DQ891338|EPCAM|4072|epithelial cell adhesion molecule##DQ894520|EPCAM|4072|epithelial cell adhesion molecule##CR542259|EPCAM|4072|epithelial cell adhesion molecule##CR542283|EPCAM|4072|epithelial cell adhesion molecule##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.999249	CTCF.p2:32:0.999
chr6_qbl_hap6	2812942	2813062	reg1011814.p1	10.747	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.44778	CTCF.p2:-13:0.429
chr7	142420315	142420434	reg1009658.p2	10.747	+	NM_001190487	-46244	+	AY358487 BC035384 AK122940 NM_001001317	-462513	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-608835	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	36952	+	M12426 TSC_hg19_v1_chr7_+_142495248	74821	+	TSC_hg19_v1_chr7_+_142552837 NM_004445 D83492 BC015495 BC051028 BC056159	132351	+	NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)##NM_004445|EPHB6|2051|EPH receptor B6##D83492|EPHB6|2051|EPH receptor B6##BC015495|EPHB6|2051|EPH receptor B6##BC051028|EPHB6|2051|EPH receptor B6##BC056159|EPHB6|2051|EPH receptor B6	0.998641	CTCF.p2:0:0.999
chr8	71060318	71060499	reg1009598.p1	10.747	+	TSC_hg19_v1_chr8_-_70983549 AF319458 AK022595 NM_024504	-76853	-	TSC_hg19_v1_chr8_-_70983468 BC052311	-76937	-	AK308488 AF205075 AK096879 NM_030958	-313159	-	BC092442 TSC_hg19_v1_chr8_-_71315599	255139	-	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	255618	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	460114	-	AF319458|PRDM14|63978|PR domain containing 14##AK022595|PRDM14|63978|PR domain containing 14##NM_024504|PRDM14|63978|PR domain containing 14##BC052311|PRDM14|63978|PR domain containing 14##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC092442|NCOA2|10499|nuclear receptor coactivator 2##NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1	0.763003	CTCF.p2:-27:0.763
chr11	33829905	33830033	reg1009982.p1	10.746	+	AB209039 AF176702 TSC_hg19_v1_chr11_-_33796067 AF174595 CU692298 EU832324 EU832409 AL136625 BC046110 AK001943 AK128454 AK304866 BC039291 NM_012175 NM_033406	-33977	-	TSC_hg19_v1_chr11_-_33757970 M27909 AK311778 X16447 X17198 NM_000611 NM_203329 NM_203330 NM_203331	-72021	-	NM_001127227	-85472	-	AB463835 CU692080 DQ892333 DQ895538 BC073973 TSC_hg19_v1_chr11_-_33891132	61073	-	BC035607 TSC_hg19_v1_chr11_-_33891285	61303	-	BC042426 TSC_hg19_v1_chr11_-_33891402 BC034041 NM_001142316	61422	-	AB209039|FBXO3|26273|F-box protein 3##AF176702|FBXO3|26273|F-box protein 3##AF174595|FBXO3|26273|F-box protein 3##EU832324|FBXO3|26273|F-box protein 3##EU832409|FBXO3|26273|F-box protein 3##AL136625|FBXO3|26273|F-box protein 3##BC046110|FBXO3|26273|F-box protein 3##AK001943|FBXO3|26273|F-box protein 3##AK128454|FBXO3|26273|F-box protein 3##AK304866|FBXO3|26273|F-box protein 3##BC039291|FBXO3|26273|F-box protein 3##NM_012175|FBXO3|26273|F-box protein 3##NM_033406|FBXO3|26273|F-box protein 3##M27909|CD59|966|CD59 molecule, complement regulatory protein##AK311778|CD59|966|CD59 molecule, complement regulatory protein##X16447|CD59|966|CD59 molecule, complement regulatory protein##X17198|CD59|966|CD59 molecule, complement regulatory protein##NM_000611|CD59|966|CD59 molecule, complement regulatory protein##NM_203329|CD59|966|CD59 molecule, complement regulatory protein##NM_203330|CD59|966|CD59 molecule, complement regulatory protein##NM_203331|CD59|966|CD59 molecule, complement regulatory protein##NM_001127227|CD59|966|CD59 molecule, complement regulatory protein##DQ892333|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##DQ895538|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC073973|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC035607|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC042426|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC034041|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142316|LMO2|4005|LIM domain only 2 (rhombotin-like 1)	0.999934	CTCF.p2:-3:1.000
chr1	160514590	160514725	reg1010419.p1	10.746	+	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	-21628	-	NM_020335 TSC_hg19_v1_chr1_+_160370394	-144278	+	M96739 AK313700 NM_005598 BC013789	-177793	+	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	34590	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	34631	-	AK314244 NM_003037 BC012602	102406	-	AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1	0.976451	CTCF.p2:1:0.976
chr2	27239836	27239985	reg1007611.p2	10.745	+	TSC_hg19_v1_chr2_+_27193529 AK312342 AB025186 NM_012326 BC011557 Y11174	-46360	+	AF264015 NM_020134 TSC_hg19_v1_chr2_+_27070999 BC002874 NM_001253723 NM_001253724	-168784	+	TSC_hg19_v1_chr2_+_27008924 U14518 BC000881 BC002703 CU674442 BT007246	-230922	+	TSC_hg19_v1_chr2_+_27255814 NM_001083590 NM_017727 BC068479	15873	+	TSC_hg19_v1_chr2_+_27255832 AK297150	15919	+	TSC_hg19_v1_chr2_+_27255839 AK296575 AK074981 AK097308 CU686645 AL833725 BC002467	15974	+	AK312342|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##AB025186|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##NM_012326|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##BC011557|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##Y11174|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##AF264015|DPYSL5|56896|dihydropyrimidinase-like 5##NM_020134|DPYSL5|56896|dihydropyrimidinase-like 5##BC002874|DPYSL5|56896|dihydropyrimidinase-like 5##NM_001253723|DPYSL5|56896|dihydropyrimidinase-like 5##NM_001253724|DPYSL5|56896|dihydropyrimidinase-like 5##U14518|CENPA|1058|centromere protein A##BC000881|CENPA|1058|centromere protein A##BC002703|CENPA|1058|centromere protein A##BT007246|CENPA|1058|centromere protein A##NM_001083590|TMEM214|54867|transmembrane protein 214##NM_017727|TMEM214|54867|transmembrane protein 214##BC068479|TMEM214|54867|transmembrane protein 214##AK297150|TMEM214|54867|transmembrane protein 214##AK296575|TMEM214|54867|transmembrane protein 214##AK074981|TMEM214|54867|transmembrane protein 214##AK097308|TMEM214|54867|transmembrane protein 214##AL833725|TMEM214|54867|transmembrane protein 214##BC002467|TMEM214|54867|transmembrane protein 214	0.99988	CTCF.p2:3:1.000
chr3	72871607	72871743	reg1008755.p1	10.745	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-1037404	-	AK313656 NM_173359	-1067752	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-1068153	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	25873	-	BC017274 TSC_hg19_v1_chr3_-_72897575	25900	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	25917	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.324075	CTCF.p2:34:0.324
chr8	38579009	38579140	reg1011887.p1	10.745	+	BC137511 BC137512 BC139744 AK125570 NM_207412	-192898	-	FJ809916 FJ809917 NM_001174063 NM_001174064 NM_015850 NM_023105 NM_023106 NM_023110	-252723	-	BC018128 TSC_hg19_v1_chr8_-_38326154 M60485 X66945 AB208919 BC015035 AK222718 AK223126	-252923	-	BX647696 NM_001146216	6629	+	AY072874 AY072875 TSC_hg19_v1_chr8_+_38614814 AK308849	35712	+	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	65648	+	BC137511|C8orf86|389649|chromosome 8 open reading frame 86##BC137512|C8orf86|389649|chromosome 8 open reading frame 86##BC139744|C8orf86|389649|chromosome 8 open reading frame 86##AK125570|C8orf86|389649|chromosome 8 open reading frame 86##NM_207412|C8orf86|389649|chromosome 8 open reading frame 86##FJ809916|FGFR1|2260|fibroblast growth factor receptor 1##FJ809917|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174063|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174064|FGFR1|2260|fibroblast growth factor receptor 1##NM_015850|FGFR1|2260|fibroblast growth factor receptor 1##NM_023105|FGFR1|2260|fibroblast growth factor receptor 1##NM_023106|FGFR1|2260|fibroblast growth factor receptor 1##NM_023110|FGFR1|2260|fibroblast growth factor receptor 1##BC018128|FGFR1|2260|fibroblast growth factor receptor 1##M60485|FGFR1|2260|fibroblast growth factor receptor 1##X66945|FGFR1|2260|fibroblast growth factor receptor 1##AB208919|FGFR1|2260|fibroblast growth factor receptor 1##BC015035|FGFR1|2260|fibroblast growth factor receptor 1##AK222718|FGFR1|2260|fibroblast growth factor receptor 1##AK223126|FGFR1|2260|fibroblast growth factor receptor 1##BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072874|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072875|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK308849|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1	0.991057	CTCF.p2:8:0.991
chr9	119334544	119334677	reg1009748.p1	10.745	+	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	-418540	+	AB022761 NM_017418	-1430514	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-1454137	-	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	114852	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	114996	+	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	842703	-	NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2	0.971357	CTCF.p2:18:0.971
chr3	89148264	89148379	reg1009064.p2	10.744	+	AL832398 NM_173824 TSC_hg19_v1_chr3_+_88199126 BC024188 AK297719 AK313547	-949293	+	NM_001195308 BC005222	-949297	-	AF543494 NM_018293	-960060	+	AF213459 NM_005233 NM_182644 BC063282 TSC_hg19_v1_chr3_+_89156770	8400	+	M83941 AF213460 BC026247 TSC_hg19_v1_chr3_+_89156840 AK291411 AB384708	8529	+	AB590252 DQ892389 DQ895602 TSC_hg19_v1_chr3_-_93692741 Y00692 AK292994	4544355	-	AL832398|C3orf38|285237|chromosome 3 open reading frame 38##NM_173824|C3orf38|285237|chromosome 3 open reading frame 38##BC024188|C3orf38|285237|chromosome 3 open reading frame 38##AK297719|C3orf38|285237|chromosome 3 open reading frame 38##AK313547|C3orf38|285237|chromosome 3 open reading frame 38##NM_001195308|CGGBP1|8545|CGG triplet repeat binding protein 1##BC005222|CGGBP1|8545|CGG triplet repeat binding protein 1##AF543494|ZNF654|55279|zinc finger protein 654##NM_018293|ZNF654|55279|zinc finger protein 654##AF213459|EPHA3|2042|EPH receptor A3##NM_005233|EPHA3|2042|EPH receptor A3##NM_182644|EPHA3|2042|EPH receptor A3##BC063282|EPHA3|2042|EPH receptor A3##M83941|EPHA3|2042|EPH receptor A3##AF213460|EPHA3|2042|EPH receptor A3##BC026247|EPHA3|2042|EPH receptor A3##AK291411|EPHA3|2042|EPH receptor A3##DQ892389|PROS1|5627|protein S (alpha)##DQ895602|PROS1|5627|protein S (alpha)##Y00692|PROS1|5627|protein S (alpha)##AK292994|PROS1|5627|protein S (alpha)	1.242525	CTCF.p2:2:0.962	CTCF.p2:34:0.281
chr12	2394081	2394184	reg1009236.p1	10.743	+	AB209016 AJ224873 AY830711 AY830712 AY830713 Z34809 Z34810 Z34811 Z34812 Z34813 Z34814 Z34815 Z34816 Z34817 Z34818 Z34819 Z34820 Z34821 Z34822 Z74996 TSC_hg19_v1_chr12_+_2162753	-231404	+	TSC_hg19_v1_chr12_+_2162452 NM_000719 NM_001129827 NM_001129829 NM_001129830 NM_001129831 NM_001129832 NM_001129833 NM_001129834 NM_001129835 NM_001129836 NM_001129837 NM_001129838 NM_001129839 NM_001129840 NM_001129841 NM_001129842 NM_001129843 NM_001129844 NM_001129846 NM_001167623 NM_001167624 NM_001167625 NM_199460 AK309111 AF465484 AK308652 BC146846	-231638	+	TSC_hg19_v1_chr12_-_2113622 AB463561 AK301109 AK056200 AK299203 BC043437 AY146652 NM_152640	-280461	-	TSC_hg19_v1_chr12_+_2904161 NM_002014 AK313918 BC001786 M88279 BC007924	510022	+	TSC_hg19_v1_chr12_+_2904310 AB385011 CU674888 DQ893668 DQ895800	510170	+	NM_018463 TSC_hg19_v1_chr12_+_2921842 AK130319 AK297189 AK291110 AK300905 AK027483 BC006552 BC013399 DQ892711 DQ895963 CU675449 AY599883	527724	+	AB209016|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AJ224873|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830711|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830712|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830713|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34809|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34810|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34811|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34812|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34813|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34814|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34815|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34816|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34817|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34818|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34819|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34820|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34821|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34822|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z74996|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK301109|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK056200|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK299203|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC043437|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AY146652|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_152640|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_002014|FKBP4|2288|FK506 binding protein 4, 59kDa##AK313918|FKBP4|2288|FK506 binding protein 4, 59kDa##BC001786|FKBP4|2288|FK506 binding protein 4, 59kDa##M88279|FKBP4|2288|FK506 binding protein 4, 59kDa##BC007924|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ893668|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ895800|FKBP4|2288|FK506 binding protein 4, 59kDa##NM_018463|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK130319|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK297189|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK291110|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK300905|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK027483|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC006552|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC013399|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ892711|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ895963|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AY599883|ITFG2|55846|integrin alpha FG-GAP repeat containing 2	0.99538	CTCF.p2:8:0.995
chr1	181906185	181906337	reg1009532.p1	10.741	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-453561	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-848396	+	NM_016545	-848624	+	BC137223 BC137224 AK128654 NM_001009992	124536	-	TSC_hg19_v1_chr1_-_182354649 AK301600	448421	-	TSC_hg19_v1_chr1_-_182357758 BC127883	451502	-	NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase	0.275307	CTCF.p2:28:0.275
chr13	21069381	21069532	reg1009625.p1	10.739	+	NM_001110219 NM_001110220 NM_001110221	-262923	-	NM_006783	-264085	-	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	-302345	-	BC119660 BC119661 TSC_hg19_v1_chr13_-_21099959 AF160216 AF077049 AF087898 AK024041 BC071810 NM_015974	30517	-	NM_006531 NM_175605 U20362 TSC_hg19_v1_chr13_+_21141275 BC030776	71785	+	TSC_hg19_v1_chr13_+_21141298 AK300769 AK310223 AK308281 AK303853 BC059357	71850	+	NM_001110219|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110220|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110221|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa##AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa##BC119660|CRYL1|51084|crystallin, lambda 1##BC119661|CRYL1|51084|crystallin, lambda 1##AF160216|CRYL1|51084|crystallin, lambda 1##AF077049|CRYL1|51084|crystallin, lambda 1##AF087898|CRYL1|51084|crystallin, lambda 1##AK024041|CRYL1|51084|crystallin, lambda 1##BC071810|CRYL1|51084|crystallin, lambda 1##NM_015974|CRYL1|51084|crystallin, lambda 1##NM_006531|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##NM_175605|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##U20362|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC030776|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK300769|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK310223|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK308281|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK303853|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC059357|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)	0.701099	CTCF.p2:-1:0.701
chr14	79064498	79064612	reg1009809.p1	10.739	+	AB018286 BC152457 NM_004796	-194463	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-798105	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-837046	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	681149	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	1613349	-	AK292210 NM_000793	1632841	-	AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	0.998462	CTCF.p2:11:0.998
chr14	34968100	34968237	reg1010741.p1	10.738	+	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	-36681	-	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	-548019	-	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1559678	+	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	40717	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	131187	-	BC011444 AK314157 NM_021914 AF134802	214820	-	AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6##BC011444|CFL2|1073|cofilin 2 (muscle)##AK314157|CFL2|1073|cofilin 2 (muscle)##NM_021914|CFL2|1073|cofilin 2 (muscle)##AF134802|CFL2|1073|cofilin 2 (muscle)	0.242117	CTCF.p2:16:0.242
chr22	41295183	41295302	reg1008917.p2	10.738	+	AB528124 CU013018 CU013306 CR456468 BC112135 AF085232 NM_145174	-37179	-	TSC_hg19_v1_chr22_+_41253101 NM_001204827 NM_022098 AK301635 BX648018 BC037424 AL365514 BC005331 BC001681 BC004989 AX721172 AK313770 AL834310 CR456442 BC001208 BC023654 BC045166 BC053556 BC011632 AB527238 CR457396 CU013040 CU013328 CU674830	-42122	+	TSC_hg19_v1_chr22_-_41252691 NM_003932	-42552	-	TSC_hg19_v1_chr22_+_41347364 NM_014248	52106	+	TSC_hg19_v1_chr22_+_41347389 BC017370 CR456560 AK315722 AF140598 BC001466 AB590096 AF142059 CU013160 CU013448 CU674722 AF085906 AY099360	52164	+	TSC_hg19_v1_chr22_+_41487787 U01877	192548	+	CU013018|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##CU013306|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##CR456468|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##BC112135|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##AF085232|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##NM_145174|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##NM_001204827|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##NM_022098|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##AK301635|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BX648018|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC037424|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##AL365514|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC005331|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC001681|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC004989|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##AK313770|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##AL834310|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##CR456442|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC001208|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC023654|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC045166|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC053556|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC011632|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##CR457396|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##NM_003932|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##NM_014248|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##BC017370|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CR456560|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AK315722|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF140598|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##BC001466|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF142059|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CU013160|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CU013448|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF085906|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AY099360|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##U01877|EP300|2033|E1A binding protein p300	0.138424	
chr22	42869639	42869795	reg1009775.p2	10.738	+	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	-41336	-	BC038245 TSC_hg19_v1_chr22_-_42765218	-104515	-	AB527391 NM_005650 NM_181492	-258340	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	46050	-	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	46097	-	BC041802 AK294584 AL450314 NM_014509 AK295223 BC119650 BC119651 BC127635 BC127636 CR456455 AL589866 AL590118 AL590120 CU013005 CU013293	80229	+	CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK294584|SERHL2|253190|serine hydrolase-like 2##AL450314|SERHL2|253190|serine hydrolase-like 2##NM_014509|SERHL2|253190|serine hydrolase-like 2##AK295223|SERHL2|253190|serine hydrolase-like 2##BC119650|SERHL2|253190|serine hydrolase-like 2##BC119651|SERHL2|253190|serine hydrolase-like 2##BC127635|SERHL2|253190|serine hydrolase-like 2##BC127636|SERHL2|253190|serine hydrolase-like 2##CR456455|SERHL2|253190|serine hydrolase-like 2##AL589866|SERHL2|253190|serine hydrolase-like 2##AL590118|SERHL2|253190|serine hydrolase-like 2##AL590120|SERHL2|253190|serine hydrolase-like 2##CU013005|SERHL2|253190|serine hydrolase-like 2##CU013293|SERHL2|253190|serine hydrolase-like 2	0.069324	
chr8	125452745	125452864	reg1010670.p1	10.738	+	TSC_hg19_v1_chr8_-_125384925 BC041379 NM_194291	-67852	-	BC101502 BC101506 AK057332 TSC_hg19_v1_chr8_-_125183771	-269066	-	AB196633 NM_001039112	-588578	+	TSC_hg19_v1_chr8_+_125463060 NM_017956 AK225083 AK000779 AK222727 BC011713 BC003057	10268	+	TSC_hg19_v1_chr8_-_125486793 CR933665	33973	-	TSC_hg19_v1_chr8_-_125486808 AK075052	34027	-	BC041379|TMEM65|157378|transmembrane protein 65##NM_194291|TMEM65|157378|transmembrane protein 65##BC101502|C8orf78|157376|chromosome 8 open reading frame 78##BC101506|C8orf78|157376|chromosome 8 open reading frame 78##AK057332|C8orf78|157376|chromosome 8 open reading frame 78##AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_017956|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK225083|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK000779|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK222727|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC011713|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC003057|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)	1.076941	CTCF.p2:4:0.998
chr1	117598071	117598187	reg1007203.p1	10.737	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	-53724	+	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	-145487	+	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	-301022	+	AK291017 TSC_hg19_v1_chr1_+_117602939	4795	+	TSC_hg19_v1_chr1_+_117602948 AF073771 NM_003594 AF080255 BC015341 BC030058	4825	+	AK023243 AK222901 BC034943 AY669488 NM_001145635 NM_025188	66250	-	AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##AK291017|TTF2|8458|transcription termination factor, RNA polymerase II##AF073771|TTF2|8458|transcription termination factor, RNA polymerase II##NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II##AF080255|TTF2|8458|transcription termination factor, RNA polymerase II##BC015341|TTF2|8458|transcription termination factor, RNA polymerase II##BC030058|TTF2|8458|transcription termination factor, RNA polymerase II##AK023243|TRIM45|80263|tripartite motif containing 45##AK222901|TRIM45|80263|tripartite motif containing 45##BC034943|TRIM45|80263|tripartite motif containing 45##AY669488|TRIM45|80263|tripartite motif containing 45##NM_001145635|TRIM45|80263|tripartite motif containing 45##NM_025188|TRIM45|80263|tripartite motif containing 45	0.814056	CTCF.p2:23:0.814
chr15	90836681	90836816	reg1011400.p1	10.737	+	TSC_hg19_v1_chr15_+_90808921 AB029315 NM_001033088 AL834503 BC007222 AL360142 AK312641 BC017192 BC019023 AF242770 AL355700 BC009389 BC096824 AF225423	-27828	+	TSC_hg19_v1_chr15_+_90792763 BC036668 NM_001029964 AK127965 BC052201	-43973	+	TSC_hg19_v1_chr15_+_90777469 BC127821 NM_001013657	-59274	+	AK289385 NM_001004309 BC067279 CR749343	58775	+	BC151834 D29640 TSC_hg19_v1_chr15_+_90931449	94706	+	TSC_hg19_v1_chr15_+_90931479 NM_003870	94729	+	AB029315|NGRN|51335|neugrin, neurite outgrowth associated##NM_001033088|NGRN|51335|neugrin, neurite outgrowth associated##AL834503|NGRN|51335|neugrin, neurite outgrowth associated##BC007222|NGRN|51335|neugrin, neurite outgrowth associated##AL360142|NGRN|51335|neugrin, neurite outgrowth associated##AK312641|NGRN|51335|neugrin, neurite outgrowth associated##BC017192|NGRN|51335|neugrin, neurite outgrowth associated##BC019023|NGRN|51335|neugrin, neurite outgrowth associated##AF242770|NGRN|51335|neugrin, neurite outgrowth associated##AL355700|NGRN|51335|neugrin, neurite outgrowth associated##BC009389|NGRN|51335|neugrin, neurite outgrowth associated##BC096824|NGRN|51335|neugrin, neurite outgrowth associated##AF225423|NGRN|51335|neugrin, neurite outgrowth associated##BC036668|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##NM_001029964|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##AK127965|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##BC127821|C15orf58|390637|chromosome 15 open reading frame 58##NM_001013657|C15orf58|390637|chromosome 15 open reading frame 58##AK289385|ZNF774|342132|zinc finger protein 774##NM_001004309|ZNF774|342132|zinc finger protein 774##BC067279|ZNF774|342132|zinc finger protein 774##CR749343|ZNF774|342132|zinc finger protein 774##BC151834|IQGAP1|8826|IQ motif containing GTPase activating protein 1##D29640|IQGAP1|8826|IQ motif containing GTPase activating protein 1##NM_003870|IQGAP1|8826|IQ motif containing GTPase activating protein 1	1.842665	CTCF.p2:-16:0.980	CTCF.p2:79:0.862
chr5	71565122	71565242	reg1011525.p1	10.737	+	TSC_hg19_v1_chr5_+_71502701 AK125194	-62419	+	TSC_hg19_v1_chr5_+_71403301 BC017240 NM_005909 BC025240 BC139918 BC150196 BC046114 AK096273 AK308147 BX647077 BC039822 BC108733 BC032516 BC073993 BC056145 BC063669 BC094834 AB463119	-161903	+	NM_004291 BC029882 U16826 CR542216 CU688778 EU831800 EU831877	-550128	+	CU687962 D87453 TSC_hg19_v1_chr5_-_71616067 BC064902 BC011818 AK299412 AK025417 AK309065	50876	-	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	50898	-	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	51020	+	AK125194|MAP1B|4131|microtubule-associated protein 1B##BC017240|MAP1B|4131|microtubule-associated protein 1B##NM_005909|MAP1B|4131|microtubule-associated protein 1B##BC025240|MAP1B|4131|microtubule-associated protein 1B##BC139918|MAP1B|4131|microtubule-associated protein 1B##BC150196|MAP1B|4131|microtubule-associated protein 1B##BC046114|MAP1B|4131|microtubule-associated protein 1B##AK096273|MAP1B|4131|microtubule-associated protein 1B##AK308147|MAP1B|4131|microtubule-associated protein 1B##BX647077|MAP1B|4131|microtubule-associated protein 1B##BC039822|MAP1B|4131|microtubule-associated protein 1B##BC108733|MAP1B|4131|microtubule-associated protein 1B##BC032516|MAP1B|4131|microtubule-associated protein 1B##BC073993|MAP1B|4131|microtubule-associated protein 1B##BC056145|MAP1B|4131|microtubule-associated protein 1B##BC063669|MAP1B|4131|microtubule-associated protein 1B##BC094834|MAP1B|4131|microtubule-associated protein 1B##NM_004291|CARTPT|9607|CART prepropeptide##BC029882|CARTPT|9607|CART prepropeptide##U16826|CARTPT|9607|CART prepropeptide##CR542216|CARTPT|9607|CART prepropeptide##EU831800|CARTPT|9607|CART prepropeptide##EU831877|CARTPT|9607|CART prepropeptide##D87453|MRPS27|23107|mitochondrial ribosomal protein S27##BC064902|MRPS27|23107|mitochondrial ribosomal protein S27##BC011818|MRPS27|23107|mitochondrial ribosomal protein S27##AK299412|MRPS27|23107|mitochondrial ribosomal protein S27##AK025417|MRPS27|23107|mitochondrial ribosomal protein S27##AK309065|MRPS27|23107|mitochondrial ribosomal protein S27##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2	0.983135	CTCF.p2:-3:0.983
chr5	99959578	99959706	reg1010912.p1	10.737	+	AF529367 TSC_hg19_v1_chr5_+_99871306	-88372	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-88569	+	BC054860 BC117134 NM_001270 AF006513	-1697414	-	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	279286	-	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	1672466	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	1874991	-	AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1	0.07151	
chr6	92040041	92040181	reg1011976.p1	10.737	+	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-743273	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-743428	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-1033499	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	2089072	-	TSC_hg19_v1_chr6_-_96025325 BC047582	3985178	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	3985290	+	BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha	0.908645	CTCF.p2:-22:0.898
chr17	1956970	1957114	reg1001342.p1	10.736	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-11734	+	TSC_hg19_v1_chr17_+_1933446 S81752 U34880 AF321876 NM_001383 AK314015 BC096086 BC096087 BC096088 BC096089 BC003099	-23621	+	BC128608 NM_178568	-28865	-	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	1356	+	DQ187313 NM_001098202	2515	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	249770	-	NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##S81752|DPH1|1801|DPH1 homolog (S. cerevisiae)##U34880|DPH1|1801|DPH1 homolog (S. cerevisiae)##AF321876|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_001383|DPH1|1801|DPH1 homolog (S. cerevisiae)##AK314015|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096086|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096087|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096088|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096089|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC003099|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC128608|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_178568|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.641355	CTCF.p2:-10:0.641
chr5	131401187	131401316	reg1009884.p3	10.736	+	M20137 NM_000588 BC069472 BC066272 BC066273 BC066274 BC066275 BC066276 M17115 M14743 CU686832 HQ448457	-4879	+	AK314452 BC047453 NM_001205248 NM_001205251 BC026161 NM_001205250 DQ655980	-53558	-	AB385389 AB020644 TSC_hg19_v1_chr5_-_131347331 AK294291 NM_001009185 NM_001205247 NM_015256	-53950	-	M11220 NM_000758 BC113924 BC113999 BC108724 M11734 M10663 AY720441 AB591004 AF510855	8274	+	NM_001017973 NM_004199 BC017062	161692	-	TSC_hg19_v1_chr5_-_131563545 AY358970 BC025960 BC035813 BX647924 NM_001017974 NM_001142598 NM_001142599	162267	-	M20137|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##NM_000588|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC069472|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066272|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066273|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066274|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066275|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066276|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M17115|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M14743|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##HQ448457|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##AK314452|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC047453|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205248|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205251|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC026161|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205250|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##DQ655980|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##AB020644|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##AK294291|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001009185|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205247|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_015256|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##M11220|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_000758|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113924|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113999|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC108724|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M11734|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M10663|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AY720441|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AF510855|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_001017973|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_004199|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC017062|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##AY358970|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC025960|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC035813|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BX647924|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001017974|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142598|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142599|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II	0.496192	CTCF.p2:-6:0.496
chr6_dbb_hap3	2852020	2852142	reg1012050.p1	10.736	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999083	CTCF.p2:8:0.999
chr9	141121343	141121471	reg1008058.p1	10.736	+	NM_001145249	-14771	+	TSC_hg19_v1_chr9_+_141044539 AK308459	-76856	+	TSC_hg19_v1_chr9_+_140918045 AB209467	-203333	+	None	None	None	None	None	None	None	None	None	NM_001145249|FAM157B|100132403|family with sequence similarity 157, member B##AK308459|TUBBP5|643224|tubulin, beta pseudogene 5##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit	1.938905	CTCF.p2:-29:0.945	CTCF.p2:33:0.994
chr15	78423780	78423876	reg1008034.p1	10.735	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	-66	-	NM_001101404	-38902	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	-53875	-	TSC_hg19_v1_chr15_+_78441718 AK299970 AK096721 AK296002 BC036227 NM_005530 AK315963 CR749548 BC021967 AK316051	17877	+	TSC_hg19_v1_chr15_+_78441734 AK222973	17906	+	TSC_hg19_v1_chr15_+_78441739 U07681 AB529210 CU692430 DQ892774 DQ893529 DQ896022	17926	+	BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2##NM_001101404|SH2D7|646892|SH2 domain containing 7##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##AK299970|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK296002|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC036227|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##NM_005530|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK315963|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##CR749548|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC021967|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK316051|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK222973|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##U07681|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ892774|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ893529|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ896022|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha	0.016867	
chr5	67548608	67548732	reg1012194.p1	10.735	+	TSC_hg19_v1_chr5_+_67511602 BC094795	-37063	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	-37090	+	BC109069 BC109070 D83597 NM_005582 AK313177	-1056070	-	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	35624	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	37876	+	AK094785 NM_001242466 AK294919	39782	+	BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.985637	CTCF.p2:12:0.986
chrX	13664301	13664426	reg1010159.p1	10.734	+	NM_001167890 NM_015507 AK075214 AK300236 AJ245671 AF193055 AF186084 AK300137 AK315018 AY358333 BC038587 AL117610 CU691592 DQ890938	-76527	+	TSC_hg19_v1_chrX_-_13397507 D28370	-266858	-	AK302365 NM_001135995	-325846	-	AK291271 AK315599 NM_152634 AK294465	6903	+	TSC_hg19_v1_chrX_+_13707246 NM_001195328 NM_004251	42878	+	TSC_hg19_v1_chrX_+_13707248 AK290505 BC017265	42930	+	NM_001167890|EGFL6|25975|EGF-like-domain, multiple 6##NM_015507|EGFL6|25975|EGF-like-domain, multiple 6##AK075214|EGFL6|25975|EGF-like-domain, multiple 6##AK300236|EGFL6|25975|EGF-like-domain, multiple 6##AJ245671|EGFL6|25975|EGF-like-domain, multiple 6##AF193055|EGFL6|25975|EGF-like-domain, multiple 6##AF186084|EGFL6|25975|EGF-like-domain, multiple 6##AK300137|EGFL6|25975|EGF-like-domain, multiple 6##AK315018|EGFL6|25975|EGF-like-domain, multiple 6##AY358333|EGFL6|25975|EGF-like-domain, multiple 6##BC038587|EGFL6|25975|EGF-like-domain, multiple 6##AL117610|EGFL6|25975|EGF-like-domain, multiple 6##DQ890938|EGFL6|25975|EGF-like-domain, multiple 6##AK302365|ATXN3L|92552|ataxin 3-like##NM_001135995|ATXN3L|92552|ataxin 3-like##AK291271|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK315599|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##NM_152634|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK294465|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##NM_001195328|RAB9A|9367|RAB9A, member RAS oncogene family##NM_004251|RAB9A|9367|RAB9A, member RAS oncogene family##AK290505|RAB9A|9367|RAB9A, member RAS oncogene family##BC017265|RAB9A|9367|RAB9A, member RAS oncogene family	0.972414	CTCF.p2:0:0.972
chr11	61501012	61501129	reg1010535.p1	10.733	+	TSC_hg19_v1_chr11_+_61447896 BC150176 BC150195 NM_006133 AB014559 BC152453	-53189	+	TSC_hg19_v1_chr11_-_61348549 BC125170 BC125171 NM_001252065 NM_004200	-152543	-	NM_001145077	-224799	+	TSC_hg19_v1_chr11_+_61520107 AB023171 NM_001127392 AB385408	19037	+	AF086762 NM_013279	21790	+	TSC_hg19_v1_chr11_-_61560064 BC002750 AF085986 AK291683 AF086763 BC015968 AF070661 NM_014206	59000	-	BC150176|DAGLA|747|diacylglycerol lipase, alpha##BC150195|DAGLA|747|diacylglycerol lipase, alpha##NM_006133|DAGLA|747|diacylglycerol lipase, alpha##AB014559|DAGLA|747|diacylglycerol lipase, alpha##BC152453|DAGLA|747|diacylglycerol lipase, alpha##BC125170|SYT7|9066|synaptotagmin VII##BC125171|SYT7|9066|synaptotagmin VII##NM_001252065|SYT7|9066|synaptotagmin VII##NM_004200|SYT7|9066|synaptotagmin VII##NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B##AB023171|C11orf9|745|chromosome 11 open reading frame 9##NM_001127392|C11orf9|745|chromosome 11 open reading frame 9##AF086762|C11orf9|745|chromosome 11 open reading frame 9##NM_013279|C11orf9|745|chromosome 11 open reading frame 9##BC002750|C11orf10|746|chromosome 11 open reading frame 10##AF085986|C11orf10|746|chromosome 11 open reading frame 10##AK291683|C11orf10|746|chromosome 11 open reading frame 10##AF086763|C11orf10|746|chromosome 11 open reading frame 10##BC015968|C11orf10|746|chromosome 11 open reading frame 10##AF070661|C11orf10|746|chromosome 11 open reading frame 10##NM_014206|C11orf10|746|chromosome 11 open reading frame 10	0.995246	CTCF.p2:9:0.995
chr15	74600291	74600397	reg1010623.p1	10.733	+	NM_025055 AK057417	-71640	+	AK299191 NM_001199040	-98299	-	AF352729 AY358748 BC015881 AK056125 NM_001142617 NM_001142619 NM_001142620 TSC_hg19_v1_chr15_-_74501378	-99001	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	10561	+	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	58191	-	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	59659	-	NM_025055|CCDC33|80125|coiled-coil domain containing 33##AK057417|CCDC33|80125|coiled-coil domain containing 33##AK299191|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001199040|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AF352729|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AY358748|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##BC015881|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AK056125|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142617|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142619|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142620|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	0.965673	CTCF.p2:-5:0.966
chr14	60431853	60431985	reg1009958.p1	10.731	+	AB587373 TSC_hg19_v1_chr14_-_60337495 BC111694 L10333 BC090862 BC068510 NM_021136	-94466	-	AK290534 NM_206852 TSC_hg19_v1_chr14_-_60097533	-334386	-	TSC_hg19_v1_chr14_-_60097342 BC000314 BC003003 AK297492	-334575	-	NM_022495 TSC_hg19_v1_chr14_+_60558640 AK095489	126908	+	AY359031 TSC_hg19_v1_chr14_-_60632031 BC000637	200113	-	TSC_hg19_v1_chr14_-_60632103 BC007337 AF151844 AK313285 AL117420 NM_016029	200215	-	BC111694|RTN1|6252|reticulon 1##L10333|RTN1|6252|reticulon 1##BC090862|RTN1|6252|reticulon 1##BC068510|RTN1|6252|reticulon 1##NM_021136|RTN1|6252|reticulon 1##AK290534|RTN1|6252|reticulon 1##NM_206852|RTN1|6252|reticulon 1##BC000314|RTN1|6252|reticulon 1##BC003003|RTN1|6252|reticulon 1##AK297492|RTN1|6252|reticulon 1##NM_022495|C14orf135|64430|chromosome 14 open reading frame 135##AK095489|C14orf135|64430|chromosome 14 open reading frame 135##AY359031|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC000637|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC007337|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AF151844|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AK313285|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AL117420|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_016029|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7	0.931873	CTCF.p2:-1:0.932
chr2	92215703	92215823	reg1011548.p1	10.731	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-367760	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-2004045	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-2138009	+	AK097438 BC021716 NM_144705 AK296678 CU692394	3321487	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	3475719	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	3571779	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.802197	CTCF.p2:-10:0.802
chr3	125485201	125485335	reg1008813.p1	10.731	+	TSC_hg19_v1_chr3_-_125314371 NM_022776	-170895	-	TSC_hg19_v1_chr3_-_125239050 NM_003794	-246215	-	AF065485 TSC_hg19_v1_chr3_-_125239047 CU676320 DQ892131 DQ895325 AB528425 AK001835 AK298972 BC018762 BC021002	-246237	-	TSC_hg19_v1_chr3_+_125635451 BC032772 BC041080	150188	+	BC073816 NM_001015050 NM_001195223	170615	-	AF231410 NM_001012337 BC141849 AK302014	202786	+	NM_022776|OSBPL11|114885|oxysterol binding protein-like 11##NM_003794|SNX4|8723|sorting nexin 4##AF065485|SNX4|8723|sorting nexin 4##DQ892131|SNX4|8723|sorting nexin 4##DQ895325|SNX4|8723|sorting nexin 4##AK001835|SNX4|8723|sorting nexin 4##AK298972|SNX4|8723|sorting nexin 4##BC018762|SNX4|8723|sorting nexin 4##BC032772|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC041080|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like##AF231410|ROPN1B|152015|rhophilin associated tail protein 1B##NM_001012337|ROPN1B|152015|rhophilin associated tail protein 1B##BC141849|ROPN1B|152015|rhophilin associated tail protein 1B	0.999894	CTCF.p2:3:1.000
chr8	107589956	107590059	reg1009753.p1	10.731	+	AK296561 NM_001198532	-129856	+	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	-307584	+	AF119334 BC109222 BC109223 NM_012082	-1258861	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	79981	+	TSC_hg19_v1_chr8_+_107670114 AK292899 BC032710 BC019691	80108	+	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	148348	+	AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1##AK292899|OXR1|55074|oxidation resistance 1##BC032710|OXR1|55074|oxidation resistance 1##BC019691|OXR1|55074|oxidation resistance 1##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1	0.977164	CTCF.p2:9:0.977
chr1	114378459	114378590	reg1009383.p1	10.730	+	TSC_hg19_v1_chr1_-_114354906 AK002082 BC026155 NM_018364 AK292552	-23523	-	TSC_hg19_v1_chr1_-_114354898 CU693140 CR627402	-23643	-	TSC_hg19_v1_chr1_-_114302096 BC002447	-76384	-	AB587398 JN084012 AF001846 AF001847 GU479452 AF150732 AF077031 BC071670 AK303124 TSC_hg19_v1_chr1_-_114414332 AK310570 AK310698 BC017785 NM_001193431 NM_012411 NM_015967	35785	-	AY265861 AY265862 AY265863 AY265864 BC127719 BC127720 TSC_hg19_v1_chr1_-_114430038 BC132904 BC132906 CR749373	51514	-	NM_001010922 TSC_hg19_v1_chr1_-_114430204 AK289439	51662	-	AK002082|RSBN1|54665|round spermatid basic protein 1##BC026155|RSBN1|54665|round spermatid basic protein 1##NM_018364|RSBN1|54665|round spermatid basic protein 1##AK292552|RSBN1|54665|round spermatid basic protein 1##CR627402|RSBN1|54665|round spermatid basic protein 1##BC002447|PHTF1|10745|putative homeodomain transcription factor 1##JN084012|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##AF001846|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##GU479452|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##AF150732|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##AF077031|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##BC071670|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##AK303124|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##AK310570|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##AK310698|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##BC017785|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##NM_001193431|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##NM_012411|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##NM_015967|PTPN22|26191|protein tyrosine phosphatase, non-receptor type 22 (lymphoid)##AY265861|BCL2L15|440603|BCL2-like 15##AY265862|BCL2L15|440603|BCL2-like 15##AY265863|BCL2L15|440603|BCL2-like 15##AY265864|BCL2L15|440603|BCL2-like 15##BC127719|BCL2L15|440603|BCL2-like 15##BC127720|BCL2L15|440603|BCL2-like 15##BC132904|BCL2L15|440603|BCL2-like 15##BC132906|BCL2L15|440603|BCL2-like 15##CR749373|BCL2L15|440603|BCL2-like 15##NM_001010922|BCL2L15|440603|BCL2-like 15##AK289439|BCL2L15|440603|BCL2-like 15	0.990496	CTCF.p2:-21:0.990
chr4	155480685	155480828	reg1012201.p1	10.730	+	BC106004 TSC_hg19_v1_chr4_-_155471547 AK307997 AK304574 BC036046 BC020786 AK002108 NM_001201564 NM_002669	-9203	-	AK127704 NM_001142552 NM_001142553 TSC_hg19_v1_chr4_-_155412931	-67849	-	TSC_hg19_v1_chr4_-_155412411 AY354498 BC140919	-68274	-	AK312972 NM_001184741 NM_005141 AK303788 AK311683 BC106760 TSC_hg19_v1_chr4_+_155484164 BC036007 BC007030 BC020762 BC107766 BC060040 AB527849 AK309592 BC070245 J00129	3406	+	AB527957 BC098280 BC099706 BC099720 BC101935 J00127 AK290559 J00128 BC020764 BC070246 BC105803 TSC_hg19_v1_chr4_-_155511898 NM_000508 NM_021871	31112	-	TSC_hg19_v1_chr4_-_155533794 BT007081 CU675513 AB527926	53021	-	BC106004|PLRG1|5356|pleiotropic regulator 1##AK307997|PLRG1|5356|pleiotropic regulator 1##AK304574|PLRG1|5356|pleiotropic regulator 1##BC036046|PLRG1|5356|pleiotropic regulator 1##BC020786|PLRG1|5356|pleiotropic regulator 1##AK002108|PLRG1|5356|pleiotropic regulator 1##NM_001201564|PLRG1|5356|pleiotropic regulator 1##NM_002669|PLRG1|5356|pleiotropic regulator 1##AK127704|DCHS2|54798|dachsous 2 (Drosophila)##NM_001142552|DCHS2|54798|dachsous 2 (Drosophila)##NM_001142553|DCHS2|54798|dachsous 2 (Drosophila)##AY354498|DCHS2|54798|dachsous 2 (Drosophila)##BC140919|DCHS2|54798|dachsous 2 (Drosophila)##AK312972|FGB|2244|fibrinogen beta chain##NM_001184741|FGB|2244|fibrinogen beta chain##NM_005141|FGB|2244|fibrinogen beta chain##AK303788|FGB|2244|fibrinogen beta chain##AK311683|FGB|2244|fibrinogen beta chain##BC106760|FGB|2244|fibrinogen beta chain##BC036007|FGB|2244|fibrinogen beta chain##BC007030|FGB|2244|fibrinogen beta chain##BC107766|FGB|2244|fibrinogen beta chain##BC060040|FGB|2244|fibrinogen beta chain##AK309592|FGB|2244|fibrinogen beta chain##BC070245|FGB|2244|fibrinogen beta chain##J00129|FGB|2244|fibrinogen beta chain##BC098280|FGA|2243|fibrinogen alpha chain##BC099706|FGA|2243|fibrinogen alpha chain##BC099720|FGA|2243|fibrinogen alpha chain##BC101935|FGA|2243|fibrinogen alpha chain##J00127|FGA|2243|fibrinogen alpha chain##AK290559|FGA|2243|fibrinogen alpha chain##J00128|FGA|2243|fibrinogen alpha chain##BC020764|FGA|2243|fibrinogen alpha chain##BC070246|FGA|2243|fibrinogen alpha chain##BC105803|FGA|2243|fibrinogen alpha chain##NM_000508|FGA|2243|fibrinogen alpha chain##NM_021871|FGA|2243|fibrinogen alpha chain##BT007081|FGG|2266|fibrinogen gamma chain	0.818867	CTCF.p2:-17:0.819
chr11	17408294	17408410	reg1008425.p1	10.729	+	TSC_hg19_v1_chr11_+_17373346 CR749521 NM_001202439 BX537685 BC136797 BC136800	-35011	+	TSC_hg19_v1_chr11_+_17332454 BC172867	-75869	+	TSC_hg19_v1_chr11_+_17298285 EU039832 EU039833 NM_005013 X76732 BC111556 AF450266	-110039	+	BC064497 NM_000525	1853	-	BC040617 AK301550 NM_001166290 TSC_hg19_v1_chr11_-_17410958	2558	-	U63421 HM635782 TSC_hg19_v1_chr11_-_17498355 AK297560 AF087138 L78207 AB209084	89991	-	CR749521|B7H6|374383|B7 homolog 6##NM_001202439|B7H6|374383|B7 homolog 6##BX537685|B7H6|374383|B7 homolog 6##BC136797|B7H6|374383|B7 homolog 6##BC136800|B7H6|374383|B7 homolog 6##EU039832|NUCB2|4925|nucleobindin 2##EU039833|NUCB2|4925|nucleobindin 2##NM_005013|NUCB2|4925|nucleobindin 2##X76732|NUCB2|4925|nucleobindin 2##BC111556|NUCB2|4925|nucleobindin 2##AF450266|NUCB2|4925|nucleobindin 2##BC064497|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##NM_000525|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##BC040617|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##AK301550|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##NM_001166290|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##U63421|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##HM635782|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AK297560|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AF087138|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##L78207|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AB209084|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	0.085638	
chr1	222628576	222628702	reg1009578.p1	10.729	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-713153	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-713209	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-713231	-	AY358602 BC007638 BC016552 NM_024746	92795	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	134538	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	162761	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.996058	CTCF.p2:13:0.996
chrX	149852156	149852273	reg1009434.p2	10.729	+	AL832715 AK297021 BC030779 TSC_hg19_v1_chrX_+_149737092	-115110	+	TSC_hg19_v1_chrX_+_149737070 NM_000252 AK291710 U46024 AK297057 AK304036	-115168	+	NM_001177466 NM_005491 U46023 BC136324 AB527434 AK315217	-238432	+	TSC_hg19_v1_chrX_+_149861868 BC032947 NM_003828 AK226109 AF057354 AJ224979	9707	+	AM393605 AM393786 DQ891322 DQ894506 AK290200 TSC_hg19_v1_chrX_-_150067096 AK293244 AY078165 AY078166 AY078167 AK125020 AK291375 BC025729 AK295217	214879	-	TSC_hg19_v1_chrX_-_150067149 BC030536 AY358837 AL136580 NM_001184808 NM_001242614 NM_031462 NM_134445 NM_134446	214993	-	AL832715|MTM1|4534|myotubularin 1##AK297021|MTM1|4534|myotubularin 1##BC030779|MTM1|4534|myotubularin 1##NM_000252|MTM1|4534|myotubularin 1##AK291710|MTM1|4534|myotubularin 1##U46024|MTM1|4534|myotubularin 1##AK297057|MTM1|4534|myotubularin 1##AK304036|MTM1|4534|myotubularin 1##NM_001177466|MAMLD1|10046|mastermind-like domain containing 1##NM_005491|MAMLD1|10046|mastermind-like domain containing 1##U46023|MAMLD1|10046|mastermind-like domain containing 1##BC136324|MAMLD1|10046|mastermind-like domain containing 1##AK315217|MAMLD1|10046|mastermind-like domain containing 1##BC032947|MTMR1|8776|myotubularin related protein 1##NM_003828|MTMR1|8776|myotubularin related protein 1##AK226109|MTMR1|8776|myotubularin related protein 1##AF057354|MTMR1|8776|myotubularin related protein 1##AJ224979|MTMR1|8776|myotubularin related protein 1##AM393605|CD99L2|83692|CD99 molecule-like 2##AM393786|CD99L2|83692|CD99 molecule-like 2##DQ891322|CD99L2|83692|CD99 molecule-like 2##DQ894506|CD99L2|83692|CD99 molecule-like 2##AK290200|CD99L2|83692|CD99 molecule-like 2##AK293244|CD99L2|83692|CD99 molecule-like 2##AY078165|CD99L2|83692|CD99 molecule-like 2##AY078166|CD99L2|83692|CD99 molecule-like 2##AY078167|CD99L2|83692|CD99 molecule-like 2##AK125020|CD99L2|83692|CD99 molecule-like 2##AK291375|CD99L2|83692|CD99 molecule-like 2##BC025729|CD99L2|83692|CD99 molecule-like 2##AK295217|CD99L2|83692|CD99 molecule-like 2##BC030536|CD99L2|83692|CD99 molecule-like 2##AY358837|CD99L2|83692|CD99 molecule-like 2##AL136580|CD99L2|83692|CD99 molecule-like 2##NM_001184808|CD99L2|83692|CD99 molecule-like 2##NM_001242614|CD99L2|83692|CD99 molecule-like 2##NM_031462|CD99L2|83692|CD99 molecule-like 2##NM_134445|CD99L2|83692|CD99 molecule-like 2##NM_134446|CD99L2|83692|CD99 molecule-like 2	0.992402	CTCF.p2:0:0.992
chr19	12751055	12751184	reg1009861.p1	10.728	+	AK307775 NM_153358 AK298597 TSC_hg19_v1_chr19_+_12721749 AX721060 AK074877 AK297715 BC106937 BC106938	-29355	+	AB385437 CU691590 EU446833 BC038586 AB033024 NM_020714 TSC_hg19_v1_chr19_-_12721628	-29558	-	BC136728 BC136729 TSC_hg19_v1_chr19_-_12662297 BC065023 AK095600 BC028367 AK092760 AX747711 BX647959 NM_144976	-88846	-	TSC_hg19_v1_chr19_-_12777530 U68382 U68567 AB209921 DQ891878 DQ895066 AB527181 U60266 BC000736	26393	-	TSC_hg19_v1_chr19_-_12777557 U05572 AK291572 AK303418 NM_000528 NM_001173498	26446	-	TSC_hg19_v1_chr19_+_12777620 NM_001099737 AK074525 AK314164	26517	+	AK307775|ZNF791|163049|zinc finger protein 791##NM_153358|ZNF791|163049|zinc finger protein 791##AK298597|ZNF791|163049|zinc finger protein 791##AK074877|ZNF791|163049|zinc finger protein 791##AK297715|ZNF791|163049|zinc finger protein 791##BC106937|ZNF791|163049|zinc finger protein 791##BC106938|ZNF791|163049|zinc finger protein 791##EU446833|ZNF490|57474|zinc finger protein 490##BC038586|ZNF490|57474|zinc finger protein 490##AB033024|ZNF490|57474|zinc finger protein 490##NM_020714|ZNF490|57474|zinc finger protein 490##BC136728|ZNF564|163050|zinc finger protein 564##BC136729|ZNF564|163050|zinc finger protein 564##BC065023|ZNF564|163050|zinc finger protein 564##BC028367|ZNF564|163050|zinc finger protein 564##AK092760|ZNF564|163050|zinc finger protein 564##BX647959|ZNF564|163050|zinc finger protein 564##NM_144976|ZNF564|163050|zinc finger protein 564##U68382|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##U68567|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##AB209921|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##DQ891878|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##DQ895066|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##U60266|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##BC000736|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##U05572|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##AK291572|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##AK303418|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##NM_000528|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##NM_001173498|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##NM_001099737|WDR83|84292|WD repeat domain 83##AK074525|WDR83|84292|WD repeat domain 83##AK314164|WDR83|84292|WD repeat domain 83	0.226641	CTCF.p2:15:0.227
chr19	48763489	48763615	reg1008148.p2	10.728	+	TSC_hg19_v1_chr19_-_48759141 BC056891 BC034564 BC046136 NM_001184902 NM_001184904	-4381	-	AK125548 TSC_hg19_v1_chr19_+_48758936 BC060888 BC008448 BC033836	-4603	+	AB023172 AF322184 AF511652 TSC_hg19_v1_chr19_-_48753084 BC041697 BC045539 AK302327 AK311079 AK297045 BX648568 AK297069 NM_001184901 NM_001184903 NM_014959	-10528	-	AK075062 NM_153608	11101	+	BC007730 NM_144577	59779	-	TSC_hg19_v1_chr19_-_48825152 AK128144	61618	-	BC056891|CARD8|22900|caspase recruitment domain family, member 8##BC034564|CARD8|22900|caspase recruitment domain family, member 8##BC046136|CARD8|22900|caspase recruitment domain family, member 8##NM_001184902|CARD8|22900|caspase recruitment domain family, member 8##NM_001184904|CARD8|22900|caspase recruitment domain family, member 8##AK125548|LOC100505812|100505812|uncharacterized LOC100505812##BC060888|LOC100505812|100505812|uncharacterized LOC100505812##AB023172|CARD8|22900|caspase recruitment domain family, member 8##AF322184|CARD8|22900|caspase recruitment domain family, member 8##AF511652|CARD8|22900|caspase recruitment domain family, member 8##BC041697|CARD8|22900|caspase recruitment domain family, member 8##BC045539|CARD8|22900|caspase recruitment domain family, member 8##AK302327|CARD8|22900|caspase recruitment domain family, member 8##AK311079|CARD8|22900|caspase recruitment domain family, member 8##AK297045|CARD8|22900|caspase recruitment domain family, member 8##BX648568|CARD8|22900|caspase recruitment domain family, member 8##AK297069|CARD8|22900|caspase recruitment domain family, member 8##NM_001184901|CARD8|22900|caspase recruitment domain family, member 8##NM_001184903|CARD8|22900|caspase recruitment domain family, member 8##NM_014959|CARD8|22900|caspase recruitment domain family, member 8##AK075062|ZNF114|163071|zinc finger protein 114##NM_153608|ZNF114|163071|zinc finger protein 114##BC007730|CCDC114|93233|coiled-coil domain containing 114##NM_144577|CCDC114|93233|coiled-coil domain containing 114##AK128144|CCDC114|93233|coiled-coil domain containing 114	0.990828	CTCF.p2:14:0.991
chr11	67973709	67973831	reg1010055.p1	10.727	+	NM_001277 NM_212469 TSC_hg19_v1_chr11_-_67888859	-84882	-	D10704 BC036471 TSC_hg19_v1_chr11_-_67888844	-85013	-	AF025374 NM_006053	-163324	+	TSC_hg19_v1_chr11_-_67981112 AF264782 BC002522 BC065287 BC087834 NM_016028 NM_017635 BC108304 AK314336 AK299201	7209	-	TSC_hg19_v1_chr11_-_68039418 AF264781	65616	-	TSC_hg19_v1_chr11_-_68039453 NM_022338	65688	-	NM_001277|CHKA|1119|choline kinase alpha##NM_212469|CHKA|1119|choline kinase alpha##D10704|CHKA|1119|choline kinase alpha##BC036471|CHKA|1119|choline kinase alpha##AF025374|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##NM_006053|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##AF264782|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC002522|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC065287|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC087834|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_016028|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_017635|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC108304|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK314336|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK299201|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AF264781|C11orf24|53838|chromosome 11 open reading frame 24##NM_022338|C11orf24|53838|chromosome 11 open reading frame 24	0.503772	CTCF.p2:11:0.504
chr12	40840334	40840460	reg1010339.p2	10.727	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	-221538	+	TSC_hg19_v1_chr12_-_40499870 BC047507	-340525	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	-340708	-	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	245885	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	741811	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	991190	+	NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4	0.27483	CTCF.p2:0:0.275
chr19	605374	605536	reg1004882.p1	10.727	+	TSC_hg19_v1_chr19_+_589888 AJ012582 NM_001194 AF065164 DQ854815 AB527443	-15542	+	TSC_hg19_v1_chr19_+_572595 X64364 AY358113 BC009040 AB085790 AK296858 AK297880 D28441 D45131 AB072923 L10240 AB091680 M87879 AB463434	-32793	+	TSC_hg19_v1_chr19_+_572571 AF548371	-32884	+	TSC_hg19_v1_chr19_-_633520 AK307525 BC030829	28043	-	TSC_hg19_v1_chr19_-_633538 AK225723 AK225865 BC098387 U75370	28088	-	TSC_hg19_v1_chr19_-_633564 BC070057 NM_005035	28145	-	AJ012582|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##NM_001194|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##AF065164|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##DQ854815|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##X64364|BSG|682|basigin (Ok blood group)##AY358113|BSG|682|basigin (Ok blood group)##BC009040|BSG|682|basigin (Ok blood group)##AB085790|BSG|682|basigin (Ok blood group)##AK296858|BSG|682|basigin (Ok blood group)##AK297880|BSG|682|basigin (Ok blood group)##D28441|BSG|682|basigin (Ok blood group)##D45131|BSG|682|basigin (Ok blood group)##AB072923|BSG|682|basigin (Ok blood group)##L10240|BSG|682|basigin (Ok blood group)##AB091680|BSG|682|basigin (Ok blood group)##M87879|BSG|682|basigin (Ok blood group)##AF548371|BSG|682|basigin (Ok blood group)##AK307525|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC030829|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##AK225723|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##AK225865|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC098387|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##U75370|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC070057|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##NM_005035|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)	0.321295	
chr4	108939880	108939995	reg1009235.p1	10.727	+	TSC_hg19_v1_chr4_+_108911045 BC000306 AM392952 AM393255 DQ891419 DQ894593 AB528829 AF001902	-28864	+	AK314444 TSC_hg19_v1_chr4_+_108911011	-28925	+	AF001903 NM_001184705 NM_005327 TSC_hg19_v1_chr4_+_108910984 X96752	-29001	+	AK303272 NM_001166119	147977	-	TSC_hg19_v1_chr4_+_109088684 BC020624	148747	+	TSC_hg19_v1_chr4_-_109090113 AF288571 AK225772 NM_001130713 NM_001130714 NM_016269	149862	-	BC000306|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ891419|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ894593|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001902|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK314444|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001903|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_001184705|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_005327|HADH|3033|hydroxyacyl-CoA dehydrogenase##X96752|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK303272|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1##BC020624|LOC641518|641518|uncharacterized LOC641518##AF288571|LEF1|51176|lymphoid enhancer-binding factor 1##AK225772|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1##NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1	0.960846	CTCF.p2:-8:0.961
chr8	79833675	79833807	reg1011482.p1	10.727	+	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	-116093	-	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	-255421	+	NM_006823 NM_181839 S76965	-405406	+	NM_001199214 NM_007029	689307	+	TSC_hg19_v1_chr8_+_80523304 D50375	689567	+	AK299500 TSC_hg19_v1_chr8_+_80523339	689598	+	J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7##NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_001199214|STMN2|11075|stathmin-like 2##NM_007029|STMN2|11075|stathmin-like 2##D50375|STMN2|11075|stathmin-like 2##AK299500|STMN2|11075|stathmin-like 2	0.447356	CTCF.p2:4:0.447
chr3	111762603	111762746	reg1010492.p1	10.726	+	AK131211 NM_001042575 BC117322	-4166	+	NM_001008273 BC004477 TSC_hg19_v1_chr3_+_111718179 AF112201 BT007408 CU677265	-44537	+	NM_001008272 NM_013259 AF303058 AF087855 AK315289 TSC_hg19_v1_chr3_+_111717781 BC015329	-44967	+	TSC_hg19_v1_chr3_+_111805267 AK303588 NM_001171747 NM_024616 AY830714 AK026839 BC017064 AK298076	42554	+	CU688884 BC030506 AY212246 AK313368 AK128276 AF521911 NM_001190259 NM_001190260 NM_152785	89385	-	BC044801 NM_183061 AK128084	250414	-	AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7##NM_001008273|TAGLN3|29114|transgelin 3##AF112201|TAGLN3|29114|transgelin 3##BT007408|TAGLN3|29114|transgelin 3##NM_001008272|TAGLN3|29114|transgelin 3##NM_013259|TAGLN3|29114|transgelin 3##AF303058|TAGLN3|29114|transgelin 3##AF087855|TAGLN3|29114|transgelin 3##AK315289|TAGLN3|29114|transgelin 3##BC015329|TAGLN3|29114|transgelin 3##AK303588|C3orf52|79669|chromosome 3 open reading frame 52##NM_001171747|C3orf52|79669|chromosome 3 open reading frame 52##NM_024616|C3orf52|79669|chromosome 3 open reading frame 52##AY830714|C3orf52|79669|chromosome 3 open reading frame 52##AK026839|C3orf52|79669|chromosome 3 open reading frame 52##BC017064|C3orf52|79669|chromosome 3 open reading frame 52##AK298076|C3orf52|79669|chromosome 3 open reading frame 52##BC030506|GCET2|257144|germinal center expressed transcript 2##AY212246|GCET2|257144|germinal center expressed transcript 2##AK313368|GCET2|257144|germinal center expressed transcript 2##AF521911|GCET2|257144|germinal center expressed transcript 2##NM_001190259|GCET2|257144|germinal center expressed transcript 2##NM_001190260|GCET2|257144|germinal center expressed transcript 2##NM_152785|GCET2|257144|germinal center expressed transcript 2##BC044801|SLC9A10|285335|solute carrier family 9, member 10##NM_183061|SLC9A10|285335|solute carrier family 9, member 10##AK128084|SLC9A10|285335|solute carrier family 9, member 10	0.85094	CTCF.p2:1:0.851
chr4	25927538	25927659	reg1010726.p1	10.726	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-11734	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-63044	-	NM_001177999 AK314514	-269508	+	L07875 BC020780 NM_005349 NM_203283	393721	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	394711	+	TSC_hg19_v1_chr4_+_26322635 AK302230	395038	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.821858	CTCF.p2:-11:0.822
chr17	6569452	6569583	reg1012345.p1	10.725	+	BC038956 TSC_hg19_v1_chr17_+_6555051 BC052606 BC067087 BC082254 NM_001105520 BC028174	-14454	+	TSC_hg19_v1_chr17_-_6554926 AB527483 AK094033 AX748423 AK311875 BC012539 AF151883 AK130946 NM_016060	-14620	-	NM_032731 TSC_hg19_v1_chr17_+_6544379 AJ344101 AK291963 AK092749 BC006405 AK311853 AF086210 BC050406	-25210	+	AJ489980 AY151833 AK172785 AK297612 TSC_hg19_v1_chr17_-_6616686 AK127797 BC104795 BC112151 BC143689 NM_001143838 NM_177550	47178	-	NM_017523 NM_199139	89638	+	BC073156 TSC_hg19_v1_chr17_+_6659364 AK292710 AK292848 BC032776 BC058017 EF028165 EF028166 X99699	89861	+	BC038956|C17orf100|388327|chromosome 17 open reading frame 100##BC052606|C17orf100|388327|chromosome 17 open reading frame 100##BC067087|C17orf100|388327|chromosome 17 open reading frame 100##BC082254|C17orf100|388327|chromosome 17 open reading frame 100##NM_001105520|C17orf100|388327|chromosome 17 open reading frame 100##BC028174|C17orf100|388327|chromosome 17 open reading frame 100##AK094033|MED31|51003|mediator complex subunit 31##AK311875|MED31|51003|mediator complex subunit 31##BC012539|MED31|51003|mediator complex subunit 31##AF151883|MED31|51003|mediator complex subunit 31##AK130946|MED31|51003|mediator complex subunit 31##NM_016060|MED31|51003|mediator complex subunit 31##NM_032731|TXNDC17|84817|thioredoxin domain containing 17##AJ344101|TXNDC17|84817|thioredoxin domain containing 17##AK291963|TXNDC17|84817|thioredoxin domain containing 17##BC006405|TXNDC17|84817|thioredoxin domain containing 17##AK311853|TXNDC17|84817|thioredoxin domain containing 17##AF086210|TXNDC17|84817|thioredoxin domain containing 17##BC050406|TXNDC17|84817|thioredoxin domain containing 17##AJ489980|SLC13A5|284111|solute carrier family 13 (sodium-dependent citrate transporter), member 5##AY151833|SLC13A5|284111|solute carrier family 13 (sodium-dependent citrate transporter), member 5##AK172785|SLC13A5|284111|solute carrier family 13 (sodium-dependent citrate transporter), member 5##AK297612|SLC13A5|284111|solute carrier family 13 (sodium-dependent citrate transporter), member 5##AK127797|SLC13A5|284111|solute carrier family 13 (sodium-dependent citrate transporter), member 5##BC104795|SLC13A5|284111|solute carrier family 13 (sodium-dependent citrate transporter), member 5##BC112151|SLC13A5|284111|solute carrier family 13 (sodium-dependent citrate transporter), member 5##BC143689|SLC13A5|284111|solute carrier family 13 (sodium-dependent citrate transporter), member 5##NM_001143838|SLC13A5|284111|solute carrier family 13 (sodium-dependent citrate transporter), member 5##NM_177550|SLC13A5|284111|solute carrier family 13 (sodium-dependent citrate transporter), member 5##NM_017523|XAF1|54739|XIAP associated factor 1##NM_199139|XAF1|54739|XIAP associated factor 1##BC073156|XAF1|54739|XIAP associated factor 1##AK292710|XAF1|54739|XIAP associated factor 1##AK292848|XAF1|54739|XIAP associated factor 1##BC032776|XAF1|54739|XIAP associated factor 1##BC058017|XAF1|54739|XIAP associated factor 1##EF028165|XAF1|54739|XIAP associated factor 1##EF028166|XAF1|54739|XIAP associated factor 1##X99699|XAF1|54739|XIAP associated factor 1	0.982278	CTCF.p2:-11:0.982
chr20	15217530	15217677	reg1012497.p1	10.725	+	BC018687 NM_001033087	-40100	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-899347	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-1241267	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	1336410	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	1493060	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	1511418	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	0.520865	CTCF.p2:13:0.521
chr11	112151380	112151539	reg1009872.p3	10.724	+	AY364435 NM_001145024	-19877	-	TSC_hg19_v1_chr11_+_112097100 NM_000317 BC018029 D17400 AK310768 BC009686 AK307133 M97655 AM392676 AM393300 AM393668 DQ890961 DQ894133	-54332	+	NM_001037290 AK027801 AK297853 AB096252	-104354	+	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 TSC_hg19_v1_chr11_+_112831996 AK314589	680528	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	680672	+	X16841 TSC_hg19_v1_chr11_+_112832212	680747	+	AY364435|C11orf34|349633|chromosome 11 open reading frame 34##NM_001145024|C11orf34|349633|chromosome 11 open reading frame 34##NM_000317|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC018029|PTS|5805|6-pyruvoyltetrahydropterin synthase##D17400|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK310768|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC009686|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK307133|PTS|5805|6-pyruvoyltetrahydropterin synthase##M97655|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM392676|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393300|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393668|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ890961|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ894133|PTS|5805|6-pyruvoyltetrahydropterin synthase##NM_001037290|BCO2|83875|beta-carotene oxygenase 2##AK027801|BCO2|83875|beta-carotene oxygenase 2##AK297853|BCO2|83875|beta-carotene oxygenase 2##AB096252|BCO2|83875|beta-carotene oxygenase 2##NM_000615|NCAM1|4684|neural cell adhesion molecule 1##NM_001076682|NCAM1|4684|neural cell adhesion molecule 1##NM_001242607|NCAM1|4684|neural cell adhesion molecule 1##NM_001242608|NCAM1|4684|neural cell adhesion molecule 1##NM_181351|NCAM1|4684|neural cell adhesion molecule 1##AK314589|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1	0.983682	CTCF.p2:3:0.984
chr19	13832202	13832313	reg1009234.p2	10.724	+	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	-215081	-	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-568077	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-570965	+	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	10322	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	26462	+	TSC_hg19_v1_chr19_+_13875323 NM_001031727 NM_032285	43063	+	AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130##NM_001031727|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)##NM_032285|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	0.0	
chr19	16639057	16639184	reg1009582.p2	10.724	+	TSC_hg19_v1_chr19_-_16636222 AB209730	-2892	-	AK297781 AK225118 AK311324 NM_032207 AK225678 AK025395 BC027869	-31905	+	CU677059 AB576176 DQ890903 DQ894056 AK058084 BC014595 NM_145046	-32150	-	TSC_hg19_v1_chr19_-_16653226 BC001552 Y08265 AF536542	14096	-	TSC_hg19_v1_chr19_-_16653240 AK296883	14119	-	BC021294 TSC_hg19_v1_chr19_-_16653249	14128	-	AB209730|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK297781|C19orf44|84167|chromosome 19 open reading frame 44##AK225118|C19orf44|84167|chromosome 19 open reading frame 44##AK311324|C19orf44|84167|chromosome 19 open reading frame 44##NM_032207|C19orf44|84167|chromosome 19 open reading frame 44##AK225678|C19orf44|84167|chromosome 19 open reading frame 44##AK025395|C19orf44|84167|chromosome 19 open reading frame 44##BC027869|C19orf44|84167|chromosome 19 open reading frame 44##AB576176|CALR3|125972|calreticulin 3##DQ890903|CALR3|125972|calreticulin 3##DQ894056|CALR3|125972|calreticulin 3##AK058084|CALR3|125972|calreticulin 3##BC014595|CALR3|125972|calreticulin 3##NM_145046|CALR3|125972|calreticulin 3##BC001552|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##Y08265|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AF536542|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK296883|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##BC021294|CHERP|10523|calcium homeostasis endoplasmic reticulum protein	0.105518	
chr20	8703095	8703209	reg1009467.p2	10.724	+	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	-590122	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-702680	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-702745	-	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	346531	+	AK307482 TSC_hg19_v1_chr20_+_9049806	346646	+	NM_182797 BC117458 BC143868	494906	+	AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4	0.999482	CTCF.p2:0:0.999
chr12	13431228	13431365	reg1010834.p1	10.723	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-81567	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-81579	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-81658	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	701690	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	1087339	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	1106976	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.768684	CTCF.p2:-16:0.769
chr15	30691303	30691452	reg1009300.p1	10.723	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-5665	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-576754	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-577035	-	TSC_hg19_v1_chr15_+_30918372 BC071990	227009	+	BC105788 NM_001039841	227501	+	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	504697	+	BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1	1.164897	CTCF.p2:-4:1.000
chr15	48542895	48543032	reg1011942.p1	10.723	+	NM_000338 NM_001184832 AK129998 AK298312 BC020860	-44466	+	BX537772 NM_001145668 AK295375	-59050	+	TSC_hg19_v1_chr15_-_48470503 AB037762 BC152420 BC152451 BC068523 AK023133 NM_016132	-72446	-	TSC_hg19_v1_chr15_+_48623625 NM_001025248 NM_001025249 AK000629 BC070339 BC110377 AK298464 U90223 AB528727	80701	+	TSC_hg19_v1_chr15_+_48624363 AK291515 NM_001948 AK312122 U31930 U62891 L11877 AB049113 M89913 DQ891191 DQ894375 CR541720 CR541781	81438	+	TSC_hg19_v1_chr15_-_48937070 L13923	394120	-	NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##BX537772|CTXN2|399697|cortexin 2##NM_001145668|CTXN2|399697|cortexin 2##AK295375|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AB037762|MYEF2|50804|myelin expression factor 2##BC152420|MYEF2|50804|myelin expression factor 2##BC152451|MYEF2|50804|myelin expression factor 2##BC068523|MYEF2|50804|myelin expression factor 2##AK023133|MYEF2|50804|myelin expression factor 2##NM_016132|MYEF2|50804|myelin expression factor 2##NM_001025248|DUT|1854|deoxyuridine triphosphatase##NM_001025249|DUT|1854|deoxyuridine triphosphatase##AK000629|DUT|1854|deoxyuridine triphosphatase##BC070339|DUT|1854|deoxyuridine triphosphatase##BC110377|DUT|1854|deoxyuridine triphosphatase##AK298464|DUT|1854|deoxyuridine triphosphatase##U90223|DUT|1854|deoxyuridine triphosphatase##AK291515|DUT|1854|deoxyuridine triphosphatase##NM_001948|DUT|1854|deoxyuridine triphosphatase##AK312122|DUT|1854|deoxyuridine triphosphatase##U31930|DUT|1854|deoxyuridine triphosphatase##U62891|DUT|1854|deoxyuridine triphosphatase##L11877|DUT|1854|deoxyuridine triphosphatase##AB049113|DUT|1854|deoxyuridine triphosphatase##M89913|DUT|1854|deoxyuridine triphosphatase##DQ891191|DUT|1854|deoxyuridine triphosphatase##DQ894375|DUT|1854|deoxyuridine triphosphatase##CR541720|DUT|1854|deoxyuridine triphosphatase##CR541781|DUT|1854|deoxyuridine triphosphatase##L13923|FBN1|2200|fibrillin 1	0.199591	
chr21	18958311	18958454	reg1009684.p1	10.723	+	TSC_hg19_v1_chr21_+_18885364 BC003684 AK313526 BC010536 Y07593 DQ891181 DQ894363 AF124598 AY072910 AY072911 AY072912 BT019876 GU474812 U90716	-73011	+	TSC_hg19_v1_chr21_+_18885168 NM_001207063 NM_001207064 NM_001207065 NM_001207066 NM_001338	-73219	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	-1855841	+	D64110 TSC_hg19_v1_chr21_-_18985177 BC011957	26758	-	TSC_hg19_v1_chr21_-_18985216 AK289408	26822	-	TSC_hg19_v1_chr21_-_18985237 NM_001130914 NM_006806	26885	-	BC003684|CXADR|1525|coxsackie virus and adenovirus receptor##AK313526|CXADR|1525|coxsackie virus and adenovirus receptor##BC010536|CXADR|1525|coxsackie virus and adenovirus receptor##Y07593|CXADR|1525|coxsackie virus and adenovirus receptor##DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor##DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor##AF124598|CXADR|1525|coxsackie virus and adenovirus receptor##AY072910|CXADR|1525|coxsackie virus and adenovirus receptor##AY072911|CXADR|1525|coxsackie virus and adenovirus receptor##AY072912|CXADR|1525|coxsackie virus and adenovirus receptor##BT019876|CXADR|1525|coxsackie virus and adenovirus receptor##GU474812|CXADR|1525|coxsackie virus and adenovirus receptor##U90716|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor##NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25##D64110|BTG3|10950|BTG family, member 3##BC011957|BTG3|10950|BTG family, member 3##AK289408|BTG3|10950|BTG family, member 3##NM_001130914|BTG3|10950|BTG family, member 3##NM_006806|BTG3|10950|BTG family, member 3	0.996509	CTCF.p2:3:0.997
chr3	99251244	99251364	reg1010003.p1	10.723	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-630812	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-799717	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-800059	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	106146	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	285441	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	343687	-	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like	0.999625	CTCF.p2:3:1.000
chr11	75919951	75920106	reg1011509.p1	10.721	+	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	-2516	-	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	-393750	+	NM_003369 TSC_hg19_v1_chr11_+_75526233 AK291011	-393806	+	TSC_hg19_v1_chr11_-_75921806 AK075540	1776	-	TSC_hg19_v1_chr11_-_76091995 AB590785 AF007393 AF081567 HQ258648 NM_004705 AK291843 BC117138 BC117140 BC110304	171980	-	TSC_hg19_v1_chr11_+_76092383 AK125821 BC040665 AK095089	172395	+	BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11##BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##NM_003369|UVRAG|7405|UV radiation resistance associated gene##AK291011|UVRAG|7405|UV radiation resistance associated gene##AK075540|WNT11|7481|wingless-type MMTV integration site family, member 11##AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	0.978418	CTCF.p2:-22:0.978
chr22	31608011	31608156	reg1011696.p1	10.721	+	TSC_hg19_v1_chr22_+_31556228 AK095947 AK291236 BC026040 CR456349	-51847	+	TSC_hg19_v1_chr22_+_31556200 BC033166 BX648019 AK027035	-51877	+	TSC_hg19_v1_chr22_+_31556196 DQ296559 DQ296560 DQ296561 DQ296562 DQ296563 DQ296564 DQ296565	-51889	+	TSC_hg19_v1_chr22_+_31608207 AK302553	93	+	NM_005569 TSC_hg19_v1_chr22_+_31608257 AK093554 AX748198	173	+	AK291640 D45906 TSC_hg19_v1_chr22_+_31608280	197	+	AK095947|RNF185|91445|ring finger protein 185##AK291236|RNF185|91445|ring finger protein 185##BC026040|RNF185|91445|ring finger protein 185##CR456349|RNF185|91445|ring finger protein 185##BC033166|RNF185|91445|ring finger protein 185##BX648019|RNF185|91445|ring finger protein 185##AK027035|RNF185|91445|ring finger protein 185##DQ296559|RNF185|91445|ring finger protein 185##DQ296560|RNF185|91445|ring finger protein 185##DQ296561|RNF185|91445|ring finger protein 185##DQ296562|RNF185|91445|ring finger protein 185##DQ296563|RNF185|91445|ring finger protein 185##DQ296564|RNF185|91445|ring finger protein 185##DQ296565|RNF185|91445|ring finger protein 185##AK302553|LIMK2|3985|LIM domain kinase 2##NM_005569|LIMK2|3985|LIM domain kinase 2##AK093554|LIMK2|3985|LIM domain kinase 2##AK291640|LIMK2|3985|LIM domain kinase 2##D45906|LIMK2|3985|LIM domain kinase 2	0.713104	CTCF.p2:24:0.713
chr4	1811775	1811894	reg1007285.p1	10.721	+	TSC_hg19_v1_chr4_+_1795019 AB209441 NM_000142 NM_001163213 NM_022965	-16808	+	TSC_hg19_v1_chr4_+_1723248 AK302463 AK225631 BC106071 AF093543 AF479620 AJ243997 BC111771	-88566	+	TSC_hg19_v1_chr4_+_1723215 NM_006342	-88617	+	DQ893606 AK293572 TSC_hg19_v1_chr4_-_1857827 BC014500 BC021208 AF061025 NM_012318	45997	-	AK289697 TSC_hg19_v1_chr4_+_1873132 NM_001042424	61250	+	TSC_hg19_v1_chr4_+_1873169 BC052254 BC020545 BC032731	61364	+	AB209441|FGFR3|2261|fibroblast growth factor receptor 3##NM_000142|FGFR3|2261|fibroblast growth factor receptor 3##NM_001163213|FGFR3|2261|fibroblast growth factor receptor 3##NM_022965|FGFR3|2261|fibroblast growth factor receptor 3##AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3##NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3##DQ893606|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK293572|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC014500|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC021208|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AF061025|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##NM_012318|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK289697|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_001042424|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	0.213567	
chr9	77853410	77853522	reg1009594.p2	10.721	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	-149956	+	TSC_hg19_v1_chr9_+_77703406 NM_012383	-150066	+	BC001366 TSC_hg19_v1_chr9_-_77703070 AK000566 AK097144 AK023413 BC036804 NM_001127603 NM_017881 BC026243	-150378	-	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	652169	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	1155925	-	AY196293 NM_001097634	1203115	+	AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1##NM_012383|OSTF1|26578|osteoclast stimulating factor 1##BC001366|C9orf95|54981|chromosome 9 open reading frame 95##AK000566|C9orf95|54981|chromosome 9 open reading frame 95##AK097144|C9orf95|54981|chromosome 9 open reading frame 95##AK023413|C9orf95|54981|chromosome 9 open reading frame 95##BC036804|C9orf95|54981|chromosome 9 open reading frame 95##NM_001127603|C9orf95|54981|chromosome 9 open reading frame 95##NM_017881|C9orf95|54981|chromosome 9 open reading frame 95##BC026243|C9orf95|54981|chromosome 9 open reading frame 95##NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.567797	CTCF.p2:-12:0.535
chr20	56662432	56662549	reg1010063.p2	10.720	+	NM_199171	-375950	-	TSC_hg19_v1_chr20_-_56285634 BC080635 AF224278 AY128643 NM_199169 NM_199170 AX775887 AK296199	-376868	-	TSC_hg19_v1_chr20_+_56285236 AK056098	-377265	+	NM_178456 BC035405	63497	+	AK299330 AK057583 BC100979 BC100980 TSC_hg19_v1_chr20_-_56884511	222009	-	TSC_hg19_v1_chr20_+_56884770 NM_020673 BC063457 AF091034 AJ276210	222292	+	NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##BC080635|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AF224278|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AY128643|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199169|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199170|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK296199|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_178456|C20orf85|128602|chromosome 20 open reading frame 85##BC035405|C20orf85|128602|chromosome 20 open reading frame 85##AK299330|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##AK057583|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100979|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100980|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##NM_020673|RAB22A|57403|RAB22A, member RAS oncogene family##BC063457|RAB22A|57403|RAB22A, member RAS oncogene family##AF091034|RAB22A|57403|RAB22A, member RAS oncogene family##AJ276210|RAB22A|57403|RAB22A, member RAS oncogene family	0.92576	CTCF.p2:10:0.926
chr9	19028989	19029100	reg1007786.p2	10.720	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	-554861	+	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	-554956	+	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	-1449948	+	BC033489 AK292245 AK057474 NM_153707	4175	-	TSC_hg19_v1_chr9_+_19049372 NM_006570	20319	+	TSC_hg19_v1_chr9_+_19049391 BC009990	20347	+	AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##BC033489|FAM154A|158297|family with sequence similarity 154, member A##AK292245|FAM154A|158297|family with sequence similarity 154, member A##AK057474|FAM154A|158297|family with sequence similarity 154, member A##NM_153707|FAM154A|158297|family with sequence similarity 154, member A##NM_006570|RRAGA|10670|Ras-related GTP binding A##BC009990|RRAGA|10670|Ras-related GTP binding A	0.998499	CTCF.p2:-2:0.998
chr16	412250	412360	reg1009670.p1	10.718	+	TSC_hg19_v1_chr16_-_402657 NM_003502 NM_181050	-9659	-	AF009674 BC044648 TSC_hg19_v1_chr16_-_402516	-9847	-	NM_006849 TSC_hg19_v1_chr16_+_333160 AK075485 AK124931 BC027964 BC000537 AK308516 BC075029 U19948 AK295383	-79134	+	BX647501 BC013829 TSC_hg19_v1_chr16_-_420539 AK226042 AK096844 BC000507 AK315180 NM_006428	8233	-	DQ892035 DQ895226 BC021557 AB045292 TSC_hg19_v1_chr16_-_431979 NM_021259 AK091823	19616	-	TSC_hg19_v1_chr16_+_447198 BC017067 NM_005009 BC004880 Y07604 AB528678 BT019438	34906	+	NM_003502|AXIN1|8312|axin 1##NM_181050|AXIN1|8312|axin 1##AF009674|AXIN1|8312|axin 1##BC044648|AXIN1|8312|axin 1##NM_006849|PDIA2|64714|protein disulfide isomerase family A, member 2##AK075485|PDIA2|64714|protein disulfide isomerase family A, member 2##AK124931|PDIA2|64714|protein disulfide isomerase family A, member 2##BC027964|PDIA2|64714|protein disulfide isomerase family A, member 2##BC000537|PDIA2|64714|protein disulfide isomerase family A, member 2##AK308516|PDIA2|64714|protein disulfide isomerase family A, member 2##BC075029|PDIA2|64714|protein disulfide isomerase family A, member 2##U19948|PDIA2|64714|protein disulfide isomerase family A, member 2##AK295383|PDIA2|64714|protein disulfide isomerase family A, member 2##BX647501|MRPL28|10573|mitochondrial ribosomal protein L28##BC013829|MRPL28|10573|mitochondrial ribosomal protein L28##AK226042|MRPL28|10573|mitochondrial ribosomal protein L28##AK096844|MRPL28|10573|mitochondrial ribosomal protein L28##BC000507|MRPL28|10573|mitochondrial ribosomal protein L28##AK315180|MRPL28|10573|mitochondrial ribosomal protein L28##NM_006428|MRPL28|10573|mitochondrial ribosomal protein L28##DQ892035|TMEM8A|58986|transmembrane protein 8A##DQ895226|TMEM8A|58986|transmembrane protein 8A##BC021557|TMEM8A|58986|transmembrane protein 8A##AB045292|TMEM8A|58986|transmembrane protein 8A##NM_021259|TMEM8A|58986|transmembrane protein 8A##AK091823|TMEM8A|58986|transmembrane protein 8A##BC017067|NME4|4833|non-metastatic cells 4, protein expressed in##NM_005009|NME4|4833|non-metastatic cells 4, protein expressed in##BC004880|NME4|4833|non-metastatic cells 4, protein expressed in##Y07604|NME4|4833|non-metastatic cells 4, protein expressed in##BT019438|NME4|4833|non-metastatic cells 4, protein expressed in	0.981661	CTCF.p2:24:0.782
chr6	145955251	145955360	reg1008772.p1	10.718	+	NM_007124 X69086	-1342387	+	TSC_hg19_v1_chr6_+_144607461 AK292506	-1347825	+	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	-1483584	+	AK124757 TSC_hg19_v1_chr6_+_146056061	100729	+	TSC_hg19_v1_chr6_-_146056437 AJ130763 AJ130764	101108	-	AF454494 TSC_hg19_v1_chr6_-_146056628 AF454493 BC005286 AF084535	101296	-	NM_007124|UTRN|7402|utrophin##X69086|UTRN|7402|utrophin##AK292506|UTRN|7402|utrophin##NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11##AK124757|LOC100507557|100507557|uncharacterized LOC100507557##AJ130763|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AJ130764|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454494|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454493|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##BC005286|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF084535|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	0.996218	CTCF.p2:19:0.996
chr11	7534472	7534651	reg1010311.p3	10.717	+	NM_198474 BX647908 BC092488 TSC_hg19_v1_chr11_+_7506763 AK298137 BC035895 AK297778	-27844	+	AK055003 AB527847 CU692338 TSC_hg19_v1_chr11_+_7273475	-261124	+	TSC_hg19_v1_chr11_+_7273164 BC046367 NM_175733 AK315013	-261368	+	NM_003621 BC021714 TSC_hg19_v1_chr11_+_7535171	542	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	682	+	AK296718 TSC_hg19_v1_chr11_+_7618421	83857	+	NM_198474|OLFML1|283298|olfactomedin-like 1##BX647908|OLFML1|283298|olfactomedin-like 1##BC092488|OLFML1|283298|olfactomedin-like 1##AK298137|OLFML1|283298|olfactomedin-like 1##BC035895|OLFML1|283298|olfactomedin-like 1##AK297778|OLFML1|283298|olfactomedin-like 1##AK055003|SYT9|143425|synaptotagmin IX##BC046367|SYT9|143425|synaptotagmin IX##NM_175733|SYT9|143425|synaptotagmin IX##AK315013|SYT9|143425|synaptotagmin IX##NM_003621|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##BC021714|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)	0.163724	
chr1	243871643	243871773	reg1008448.p1	10.717	+	TSC_hg19_v1_chr1_+_243419405 AK297105 AF250731	-452273	+	BC032454 TSC_hg19_v1_chr1_+_243419371 AK299249	-452337	+	TSC_hg19_v1_chr1_+_243419357 AK299212	-452353	+	AF135794 AB463341 AM392791 AM392849 AJ245709 AF124141 AK308052 BC020479 AF085234 AY005799 BC121154 NM_005465 NM_181690	134819	-	AL117525 NM_001206729	135177	-	TSC_hg19_v1_chr1_+_244214553 NM_205768	342848	+	AK297105|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF250731|SDCCAG8|10806|serologically defined colon cancer antigen 8##BC032454|SDCCAG8|10806|serologically defined colon cancer antigen 8##AK299249|SDCCAG8|10806|serologically defined colon cancer antigen 8##AK299212|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF135794|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392791|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392849|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AJ245709|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF124141|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AK308052|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC020479|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF085234|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AY005799|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC121154|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_005465|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_181690|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AL117525|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_001206729|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_205768|ZNF238|10472|zinc finger protein 238	0.010991	
chr6	135262106	135262236	reg1008649.p2	10.717	+	TSC_hg19_v1_chr6_+_134758857 AK055166	-503323	+	AK055077 NM_001143676	-622976	-	TSC_hg19_v1_chr6_-_134498984 FM205708 AK293383 NM_001143677	-763179	-	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	9061	-	CU674720 EU831981 EU832074 TSC_hg19_v1_chr6_-_135375948 BC040849 AJ420551 BC001465	113717	-	TSC_hg19_v1_chr6_-_135375958 AK024258 AK295545 AF161394 U87791 AJ459826 AJ459827 NM_001145158 NM_001145207 NM_006620	113823	-	AK055166|LOC154092|154092|uncharacterized LOC154092##AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)##EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)##BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)##BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)##AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)##AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)##AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)##U87791|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)	0.959344	CTCF.p2:0:0.959
chr15	61487472	61487580	reg1009869.p2	10.716	+	U04899 U04898 NM_002943 NM_134260	-567841	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	-602847	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-716252	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	33898	-	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	33971	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	865088	-	U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	0.0	
chr17	60304115	60304262	reg1012813.p1	10.716	+	TSC_hg19_v1_chr17_-_60142600 BC140891 AF117754 NM_005121	-161561	-	TSC_hg19_v1_chr17_-_60005339 AB033113 AK308307 AK299032 AL136800 NM_020748	-298846	-	BC101472 BC101474 AF360549 TSC_hg19_v1_chr17_-_59940873 NM_032043	-363394	-	NM_001144933	143390	+	AK098684 NM_173503 BC101752 BC101778	153738	+	TSC_hg19_v1_chr17_+_60501257 NM_181725 BC006985 AB590991 AF161384 AK022822 AF161385	197075	+	BC140891|MED13|9969|mediator complex subunit 13##AF117754|MED13|9969|mediator complex subunit 13##NM_005121|MED13|9969|mediator complex subunit 13##AB033113|INTS2|57508|integrator complex subunit 2##AK308307|INTS2|57508|integrator complex subunit 2##AK299032|INTS2|57508|integrator complex subunit 2##AL136800|INTS2|57508|integrator complex subunit 2##NM_020748|INTS2|57508|integrator complex subunit 2##BC101472|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##BC101474|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AF360549|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_032043|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_001144933|EFCAB3|146779|EF-hand calcium binding domain 3##AK098684|EFCAB3|146779|EF-hand calcium binding domain 3##NM_173503|EFCAB3|146779|EF-hand calcium binding domain 3##BC101752|EFCAB3|146779|EF-hand calcium binding domain 3##BC101778|EFCAB3|146779|EF-hand calcium binding domain 3##NM_181725|METTL2A|339175|methyltransferase like 2A##BC006985|METTL2A|339175|methyltransferase like 2A##AF161384|METTL2A|339175|methyltransferase like 2A##AK022822|METTL2A|339175|methyltransferase like 2A##AF161385|METTL2A|339175|methyltransferase like 2A	0.025199	
chr22	19132322	19132439	reg1009514.p2	10.716	+	TSC_hg19_v1_chr22_-_19132175 NM_022719	-193	-	L42353 BC003015 CU013055 CU013343 BC006542 DQ890662 DQ893842 L78010 AB463030 CR456344 L77566 TSC_hg19_v1_chr22_-_19132163	-235	-	L77564 NM_053006	-14060	+	NM_005315	5415	-	TSC_hg19_v1_chr22_+_19159215 AB593110	26837	+	HM037273 TSC_hg19_v1_chr22_-_19165931 AK298204	33567	-	NM_022719|DGCR14|8220|DiGeorge syndrome critical region gene 14##L42353|DGCR14|8220|DiGeorge syndrome critical region gene 14##BC003015|DGCR14|8220|DiGeorge syndrome critical region gene 14##CU013055|DGCR14|8220|DiGeorge syndrome critical region gene 14##CU013343|DGCR14|8220|DiGeorge syndrome critical region gene 14##BC006542|DGCR14|8220|DiGeorge syndrome critical region gene 14##DQ890662|DGCR14|8220|DiGeorge syndrome critical region gene 14##DQ893842|DGCR14|8220|DiGeorge syndrome critical region gene 14##L78010|DGCR14|8220|DiGeorge syndrome critical region gene 14##CR456344|DGCR14|8220|DiGeorge syndrome critical region gene 14##L77566|DGCR14|8220|DiGeorge syndrome critical region gene 14##L77564|TSSK2|23617|testis-specific serine kinase 2##NM_053006|TSSK2|23617|testis-specific serine kinase 2##NM_005315|GSC2|2928|goosecoid homeobox 2##AB593110|LOC100652736|100652736|uncharacterized LOC100652736##HM037273|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1##AK298204|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1	0.579258	CTCF.p2:0:0.579
chr12	80580571	80580685	reg1011343.p1	10.715	+	AF458589 BC092481 NM_001143885 NM_001244990	-251394	-	TSC_hg19_v1_chr12_-_80328937 NM_002480	-251662	-	TSC_hg19_v1_chr12_-_80328878 BC062560 AY380574 BC111752 D87930 AK314193 NM_001244992 BC047898 BC000812	-251828	-	NM_173591	22604	+	NM_001145026	257497	+	NM_002469 AK313287 X52011 BC017834 AB587443 CU676084 DQ893248 DQ896577 CR407641 CR541763	520824	+	AF458589|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC092481|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143885|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001244990|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_002480|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC062560|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##AY380574|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC111752|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##D87930|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##AK314193|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001244992|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC047898|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC000812|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_173591|OTOGL|283310|otogelin-like##NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q##NM_002469|MYF6|4618|myogenic factor 6 (herculin)##AK313287|MYF6|4618|myogenic factor 6 (herculin)##X52011|MYF6|4618|myogenic factor 6 (herculin)##BC017834|MYF6|4618|myogenic factor 6 (herculin)##DQ893248|MYF6|4618|myogenic factor 6 (herculin)##DQ896577|MYF6|4618|myogenic factor 6 (herculin)##CR407641|MYF6|4618|myogenic factor 6 (herculin)##CR541763|MYF6|4618|myogenic factor 6 (herculin)	0.972207	CTCF.p2:-9:0.972
chr3	46410239	46410339	reg1008651.p2	10.715	+	TSC_hg19_v1_chr3_+_46395601 AK292920 U03905	-14682	+	AK292685 NM_001123041 NM_001123396	-15060	+	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	-126373	+	NM_000579 NM_001100168	1343	+	AF015525 NM_003965 AF014958 BC071682 BC025717 BC096075 BC096076 BC099623 AK296673 NM_001130910 AK313312 AF015524	38607	+	AK316330 U84119 AK298035 NM_001199149	94829	-	AK292920|CCR2|729230|chemokine (C-C motif) receptor 2##U03905|CCR2|729230|chemokine (C-C motif) receptor 2##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##NM_000579|CCR5|1234|chemokine (C-C motif) receptor 5##NM_001100168|CCR5|1234|chemokine (C-C motif) receptor 5##AF015525|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_003965|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC071682|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC096075|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC096076|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK296673|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_001130910|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK313312|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AF015524|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK316330|LTF|4057|lactotransferrin##U84119|LTF|4057|lactotransferrin##AK298035|LTF|4057|lactotransferrin##NM_001199149|LTF|4057|lactotransferrin	0.630242	CTCF.p2:5:0.630
chr17	40730567	40730701	reg1009213.p1	10.713	+	TSC_hg19_v1_chr17_-_40729727 AB528689 GQ851964 GQ851965 AF440240 AB030304 NM_013290 NM_016556 FJ952179 FJ952180 FJ952181 FJ952182 FJ952183 BC008792	-886	-	TSC_hg19_v1_chr17_+_40719130 AF203978 AK314378 AB527756 BT009812	-11496	+	TSC_hg19_v1_chr17_+_40719119 NM_170607 NM_198204 NM_198205 AF213666 AF213667 AF213668 BC010689 AK290258 AK296114 BC014537 AK000150 AK303221 AK309628 AK315432	-11538	+	BX647175 CU690614 TSC_hg19_v1_chr17_-_40761363	30717	-	NM_001070	30723	+	TSC_hg19_v1_chr17_-_40761382 AK294791	30741	-	GQ851964|PSMC3IP|29893|PSMC3 interacting protein##GQ851965|PSMC3IP|29893|PSMC3 interacting protein##AF440240|PSMC3IP|29893|PSMC3 interacting protein##AB030304|PSMC3IP|29893|PSMC3 interacting protein##NM_013290|PSMC3IP|29893|PSMC3 interacting protein##NM_016556|PSMC3IP|29893|PSMC3 interacting protein##FJ952179|PSMC3IP|29893|PSMC3 interacting protein##FJ952180|PSMC3IP|29893|PSMC3 interacting protein##FJ952181|PSMC3IP|29893|PSMC3 interacting protein##FJ952182|PSMC3IP|29893|PSMC3 interacting protein##FJ952183|PSMC3IP|29893|PSMC3 interacting protein##BC008792|PSMC3IP|29893|PSMC3 interacting protein##AF203978|MLX|6945|MAX-like protein X##AK314378|MLX|6945|MAX-like protein X##BT009812|MLX|6945|MAX-like protein X##NM_170607|MLX|6945|MAX-like protein X##NM_198204|MLX|6945|MAX-like protein X##NM_198205|MLX|6945|MAX-like protein X##AF213666|MLX|6945|MAX-like protein X##AF213667|MLX|6945|MAX-like protein X##AF213668|MLX|6945|MAX-like protein X##BC010689|MLX|6945|MAX-like protein X##AK290258|MLX|6945|MAX-like protein X##AK296114|MLX|6945|MAX-like protein X##BC014537|MLX|6945|MAX-like protein X##AK000150|MLX|6945|MAX-like protein X##AK303221|MLX|6945|MAX-like protein X##AK309628|MLX|6945|MAX-like protein X##AK315432|MLX|6945|MAX-like protein X##BX647175|FAM134C|162427|family with sequence similarity 134, member C##NM_001070|TUBG1|7283|tubulin, gamma 1##AK294791|FAM134C|162427|family with sequence similarity 134, member C	0.030175	
chr4	169838669	169838793	reg1008929.p1	10.713	+	TSC_hg19_v1_chr4_+_169753245 NM_001166110 AB023209	-85554	+	TSC_hg19_v1_chr4_+_169552755 NM_001166109 AK095512	-285935	+	TSC_hg19_v1_chr4_+_169418204 AF464873 NM_001166108 NM_016081 BC140850 BC144666	-420511	+	BC021973 BC033650 TSC_hg19_v1_chr4_-_169931407 AK027337 AK291756 AK299847 AL833393 NM_032783	92727	-	BC041023 TSC_hg19_v1_chr4_-_170077830	239088	-	TSC_hg19_v1_chr4_-_170192099 BC053671	353316	-	NM_001166110|PALLD|23022|palladin, cytoskeletal associated protein##AB023209|PALLD|23022|palladin, cytoskeletal associated protein##NM_001166109|PALLD|23022|palladin, cytoskeletal associated protein##AK095512|PALLD|23022|palladin, cytoskeletal associated protein##AF464873|PALLD|23022|palladin, cytoskeletal associated protein##NM_001166108|PALLD|23022|palladin, cytoskeletal associated protein##NM_016081|PALLD|23022|palladin, cytoskeletal associated protein##BC140850|PALLD|23022|palladin, cytoskeletal associated protein##BC144666|PALLD|23022|palladin, cytoskeletal associated protein##BC021973|CBR4|84869|carbonyl reductase 4##BC033650|CBR4|84869|carbonyl reductase 4##AK027337|CBR4|84869|carbonyl reductase 4##AK291756|CBR4|84869|carbonyl reductase 4##AL833393|CBR4|84869|carbonyl reductase 4##NM_032783|CBR4|84869|carbonyl reductase 4##BC041023|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1	0.94735	CTCF.p2:24:0.947
chr9	115665541	115665652	reg1009415.p2	10.713	+	CU690566 BC048285 AK314414 AK055571 AF242557 NM_033051	-12520	-	TSC_hg19_v1_chr9_+_115631819 AK129991	-33731	+	TSC_hg19_v1_chr9_+_115513056 NM_001012994	-152505	+	AK095843 NM_001101338	108875	-	AK301275 HQ258583 AF022158 NM_003408 BC126390 BC144145	153406	-	TSC_hg19_v1_chr9_+_115913250 NM_001860	247645	+	BC048285|SLC46A2|57864|solute carrier family 46, member 2##AK314414|SLC46A2|57864|solute carrier family 46, member 2##AK055571|SLC46A2|57864|solute carrier family 46, member 2##AF242557|SLC46A2|57864|solute carrier family 46, member 2##NM_033051|SLC46A2|57864|solute carrier family 46, member 2##AK129991|SNX30|401548|sorting nexin family member 30##NM_001012994|SNX30|401548|sorting nexin family member 30##AK095843|ZNF883|169834|zinc finger protein 883##NM_001101338|ZNF883|169834|zinc finger protein 883##AK301275|ZFP37|7539|zinc finger protein 37 homolog (mouse)##HQ258583|ZFP37|7539|zinc finger protein 37 homolog (mouse)##AF022158|ZFP37|7539|zinc finger protein 37 homolog (mouse)##NM_003408|ZFP37|7539|zinc finger protein 37 homolog (mouse)##BC126390|ZFP37|7539|zinc finger protein 37 homolog (mouse)##BC144145|ZFP37|7539|zinc finger protein 37 homolog (mouse)##NM_001860|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2	0.200895	CTCF.p2:7:0.201
chrX	46763235	46763339	reg1007959.p1	10.713	+	TSC_hg19_v1_chrX_+_46696479 AK312555 CU692158	-66783	+	BC043348 BC053530 TSC_hg19_v1_chrX_+_46696426	-66861	+	NM_006915 AJ007590 TSC_hg19_v1_chrX_+_46696391 BC027851	-66910	+	TSC_hg19_v1_chrX_+_46771855 AK291220 NM_001077445 D86969 NM_014735 BC113880 BC114487 AF127774	8648	+	TSC_hg19_v1_chrX_+_46937753 AK223360 NM_004683 NM_152869	174472	+	TSC_hg19_v1_chrX_+_46937812 BC050371 BC058880 AK290136	174550	+	AK312555|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC043348|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC053530|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AK291220|PHF16|9767|PHD finger protein 16##NM_001077445|PHF16|9767|PHD finger protein 16##D86969|PHF16|9767|PHD finger protein 16##NM_014735|PHF16|9767|PHD finger protein 16##BC113880|PHF16|9767|PHD finger protein 16##BC114487|PHF16|9767|PHD finger protein 16##AF127774|PHF16|9767|PHD finger protein 16##AK223360|RGN|9104|regucalcin (senescence marker protein-30)##NM_004683|RGN|9104|regucalcin (senescence marker protein-30)##NM_152869|RGN|9104|regucalcin (senescence marker protein-30)##BC050371|RGN|9104|regucalcin (senescence marker protein-30)##BC058880|RGN|9104|regucalcin (senescence marker protein-30)##AK290136|RGN|9104|regucalcin (senescence marker protein-30)	0.0	
chr1	116314602	116314723	reg1010319.p1	10.712	+	AK129891 TSC_hg19_v1_chr1_-_116311410 NM_001232 AK293595	-3246	-	TSC_hg19_v1_chr1_-_116311336 AK295502 BC022288 AK313041	-3311	-	CU692536 DQ893219 DQ896548 D55655 AK225959 TSC_hg19_v1_chr1_-_116311307	-3428	-	BC096361 BC096362 TSC_hg19_v1_chr1_+_116380417 AB007959 BC028729	65795	+	AK307156 TSC_hg19_v1_chr1_-_116383325 NM_001111061 AK312849	68680	-	BC096359 BC096360 TSC_hg19_v1_chr1_-_116383744 M96740 NM_005599	69058	-	AK129891|CASQ2|845|calsequestrin 2 (cardiac muscle)##NM_001232|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK293595|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK295502|CASQ2|845|calsequestrin 2 (cardiac muscle)##BC022288|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK313041|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ893219|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ896548|CASQ2|845|calsequestrin 2 (cardiac muscle)##D55655|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK225959|CASQ2|845|calsequestrin 2 (cardiac muscle)##AB007959|NHLH2|4808|nescient helix loop helix 2##BC028729|NHLH2|4808|nescient helix loop helix 2##NM_001111061|NHLH2|4808|nescient helix loop helix 2##AK312849|NHLH2|4808|nescient helix loop helix 2##BC096359|NHLH2|4808|nescient helix loop helix 2##BC096360|NHLH2|4808|nescient helix loop helix 2##M96740|NHLH2|4808|nescient helix loop helix 2##NM_005599|NHLH2|4808|nescient helix loop helix 2	0.0	
chr2	58675278	58675420	reg1010539.p1	10.712	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-206867	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-401361	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-401595	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	2105173	-	AF080216 TSC_hg19_v1_chr2_-_60780784	2105429	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	2308135	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.971659	CTCF.p2:-10:0.972
chr20	57797670	57797795	reg1009082.p2	10.711	+	NM_178457	-31658	+	TSC_hg19_v1_chr20_-_57617873 AK314449 AK002157 BC010649 BC013969 AF151865 AK298135 NM_016045	-179864	-	BT007293 TSC_hg19_v1_chr20_-_57607361 BC003671 BC001690 AK315493 AK026556 AF077045 AF052955 BC105811 NM_006886	-190369	-	BC008876 TSC_hg19_v1_chr20_+_57875490 BC053866 NM_000114 NM_207032 NM_207033 NM_207034	77757	+	TSC_hg19_v1_chr20_+_57875665 J05081 X52001 AB590897 CU679163 BT007085 DQ096281	78025	+	AK098788 NM_001199505	354831	+	NM_178457|ZNF831|128611|zinc finger protein 831##AK314449|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK002157|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC010649|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC013969|SLMO2|51012|slowmo homolog 2 (Drosophila)##AF151865|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK298135|SLMO2|51012|slowmo homolog 2 (Drosophila)##NM_016045|SLMO2|51012|slowmo homolog 2 (Drosophila)##BT007293|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC003671|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC001690|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK315493|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK026556|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF077045|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF052955|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC105811|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##NM_006886|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC008876|EDN3|1908|endothelin 3##BC053866|EDN3|1908|endothelin 3##NM_000114|EDN3|1908|endothelin 3##NM_207032|EDN3|1908|endothelin 3##NM_207033|EDN3|1908|endothelin 3##NM_207034|EDN3|1908|endothelin 3##J05081|EDN3|1908|endothelin 3##X52001|EDN3|1908|endothelin 3##BT007085|EDN3|1908|endothelin 3##DQ096281|EDN3|1908|endothelin 3##AK098788|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199505|PHACTR3|116154|phosphatase and actin regulator 3	0.07239	
chr5	56946247	56946363	reg1010160.p1	10.711	+	BC137470 BC137473 BX648504 NM_001017992	-167711	-	NM_001127236 AL136844 AB463051 AM392551 AM393442	-436377	+	BC113004 NM_001127235	-475032	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	809631	-	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	840989	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	932614	+	BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family	0.739845	CTCF.p2:2:0.740
chr1	106336286	106336412	reg1011773.p1	10.710	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-2043847	+	NM_001008221 AK292341	-2044071	+	AK292341 NM_001008221	-2097278	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	1263016	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	1346393	+	AB023193 TSC_hg19_v1_chr1_+_107683657	1347255	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.975527	CTCF.p2:16:0.976
chr1	3400532	3400654	reg1010188.p1	10.710	+	AK310408 TSC_hg19_v1_chr1_+_3388187 AK296150	-12409	+	TSC_hg19_v1_chr1_+_3371228 NM_014448 AK095984	-29388	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	-414817	+	TSC_hg19_v1_chr1_-_3447976 AB011539	47399	-	AB231860 NM_001409	127465	-	TSC_hg19_v1_chr1_+_3541565 NM_182752 AK096427	140971	+	AK310408|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK296150|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##NM_014448|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK095984|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16##AB011539|MEGF6|1953|multiple EGF-like-domains 6##AB231860|MEGF6|1953|multiple EGF-like-domains 6##NM_001409|MEGF6|1953|multiple EGF-like-domains 6##NM_182752|TPRG1L|127262|tumor protein p63 regulated 1-like##AK096427|TPRG1L|127262|tumor protein p63 regulated 1-like	0.635078	CTCF.p2:18:0.596
chr16	89282983	89283123	reg1012010.p1	10.710	+	NM_001242757	-16525	-	TSC_hg19_v1_chr16_+_89238171 D83542 NM_004933 AK308596 AK308631 BC008951 DQ893277 DQ896608	-44854	+	TSC_hg19_v1_chr16_+_89213949 AK090408	-69107	+	TSC_hg19_v1_chr16_+_89284112 NM_001201407 NM_182531 AK056437 AK295122	1074	+	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	67021	-	BC041585 TSC_hg19_v1_chr16_-_89351073	67903	-	NM_001242757|SLC22A31|146429|solute carrier family 22, member 31##D83542|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##NM_004933|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##AK308631|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##BC008951|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##DQ893277|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##DQ896608|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##NM_001201407|ZNF778|197320|zinc finger protein 778##NM_182531|ZNF778|197320|zinc finger protein 778##AK056437|ZNF778|197320|zinc finger protein 778##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##BC041585|ANKRD11|29123|ankyrin repeat domain 11	0.97662	CTCF.p2:11:0.977
chr2	110745447	110745547	reg1008452.p1	10.710	+	BC094740 NM_001205288 NM_033514	-89489	+	NM_005054 U64675	-193532	+	AL136868 NM_001037866 NM_001123363 NM_032260	-195163	+	U17077 AB590150 DQ892870 DQ896118 TSC_hg19_v1_chr2_-_110873397 BC003179	127908	-	TSC_hg19_v1_chr2_-_110873536 AK311353	128068	-	TSC_hg19_v1_chr2_-_110873641 AK056616	128147	-	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U17077|MALL|7851|mal, T-cell differentiation protein-like##DQ892870|MALL|7851|mal, T-cell differentiation protein-like##DQ896118|MALL|7851|mal, T-cell differentiation protein-like##BC003179|MALL|7851|mal, T-cell differentiation protein-like##AK311353|MALL|7851|mal, T-cell differentiation protein-like##AK056616|MALL|7851|mal, T-cell differentiation protein-like	0.99755	CTCF.p2:7:0.998
chr6	160941020	160941162	reg1010438.p1	10.710	+	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	-171697	+	CU689064 BC039899 AK290787 X98333 AB075951 BC030978 NM_003058	-261216	-	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	-398177	+	NM_005577	146315	-	NM_000301 NM_001168338 AK308036 AK312966 AK298338 X05199 M74220 BC060513	182170	+	TSC_hg19_v1_chr6_+_161412797 BC146770 D86968	471651	+	BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##BC039899|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AK290787|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##X98333|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AB075951|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC030978|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003058|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_005577|LPA|4018|lipoprotein, Lp(a)##NM_000301|PLG|5340|plasminogen##NM_001168338|PLG|5340|plasminogen##AK308036|PLG|5340|plasminogen##AK312966|PLG|5340|plasminogen##AK298338|PLG|5340|plasminogen##X05199|PLG|5340|plasminogen##M74220|PLG|5340|plasminogen##BC060513|PLG|5340|plasminogen##BC146770|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##D86968|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4	0.995415	CTCF.p2:-23:0.995
chr10	34811624	34811747	reg1011127.p1	10.709	+	TSC_hg19_v1_chr10_-_33623996 BX648025	-1187687	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1187871	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	-1188232	-	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	292466	-	AK310225 AK300491 NM_001198778 NM_001198779	551527	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	567587	-	BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2	0.360801	CTCF.p2:-3:0.361
chr14	51244726	51244857	reg1012165.p1	10.709	+	TSC_hg19_v1_chr14_-_51135048 AK225896 AK095903	-109723	-	BC020537 TSC_hg19_v1_chr14_-_51135025 BC006385 NM_021818 AK021500	-109765	-	AJ292969 AK023071 TSC_hg19_v1_chr14_-_51135016 AK290883	-109851	-	AB046785 TSC_hg19_v1_chr14_-_51297860 BC065521 AF223937 AF223938 AF223939 AF302773 AY736182 NM_016350 NM_020921 NM_182944 NM_182946	53029	-	AY311396 AY311397 AY311398 AY311399 BC107141 NM_001206673 NM_181814 BC107142 AK128464	94087	+	AF046785 AF066858 TSC_hg19_v1_chr14_-_51411202 AK313206 Y15233 AK309333 BC065011 BC110791 BC009895 BC082229 AK225904 AK300580 BC095850 M14636 NM_001163940 NM_002863	166391	-	AK225896|SAV1|60485|salvador homolog 1 (Drosophila)##AK095903|SAV1|60485|salvador homolog 1 (Drosophila)##BC020537|SAV1|60485|salvador homolog 1 (Drosophila)##BC006385|SAV1|60485|salvador homolog 1 (Drosophila)##NM_021818|SAV1|60485|salvador homolog 1 (Drosophila)##AK021500|SAV1|60485|salvador homolog 1 (Drosophila)##AJ292969|SAV1|60485|salvador homolog 1 (Drosophila)##AK023071|SAV1|60485|salvador homolog 1 (Drosophila)##AK290883|SAV1|60485|salvador homolog 1 (Drosophila)##AB046785|NIN|51199|ninein (GSK3B interacting protein)##BC065521|NIN|51199|ninein (GSK3B interacting protein)##AF223937|NIN|51199|ninein (GSK3B interacting protein)##AF223938|NIN|51199|ninein (GSK3B interacting protein)##AF223939|NIN|51199|ninein (GSK3B interacting protein)##AF302773|NIN|51199|ninein (GSK3B interacting protein)##AY736182|NIN|51199|ninein (GSK3B interacting protein)##NM_016350|NIN|51199|ninein (GSK3B interacting protein)##NM_020921|NIN|51199|ninein (GSK3B interacting protein)##NM_182944|NIN|51199|ninein (GSK3B interacting protein)##NM_182946|NIN|51199|ninein (GSK3B interacting protein)##AY311396|ABHD12B|145447|abhydrolase domain containing 12B##AY311397|ABHD12B|145447|abhydrolase domain containing 12B##AY311398|ABHD12B|145447|abhydrolase domain containing 12B##AY311399|ABHD12B|145447|abhydrolase domain containing 12B##BC107141|ABHD12B|145447|abhydrolase domain containing 12B##NM_001206673|ABHD12B|145447|abhydrolase domain containing 12B##NM_181814|ABHD12B|145447|abhydrolase domain containing 12B##BC107142|ABHD12B|145447|abhydrolase domain containing 12B##AK128464|ABHD12B|145447|abhydrolase domain containing 12B##AF046785|PYGL|5836|phosphorylase, glycogen, liver##AF066858|PYGL|5836|phosphorylase, glycogen, liver##AK313206|PYGL|5836|phosphorylase, glycogen, liver##Y15233|PYGL|5836|phosphorylase, glycogen, liver##AK309333|PYGL|5836|phosphorylase, glycogen, liver##BC065011|PYGL|5836|phosphorylase, glycogen, liver##BC110791|PYGL|5836|phosphorylase, glycogen, liver##BC009895|PYGL|5836|phosphorylase, glycogen, liver##BC082229|PYGL|5836|phosphorylase, glycogen, liver##AK225904|PYGL|5836|phosphorylase, glycogen, liver##AK300580|PYGL|5836|phosphorylase, glycogen, liver##BC095850|PYGL|5836|phosphorylase, glycogen, liver##M14636|PYGL|5836|phosphorylase, glycogen, liver##NM_001163940|PYGL|5836|phosphorylase, glycogen, liver##NM_002863|PYGL|5836|phosphorylase, glycogen, liver	0.999916	CTCF.p2:13:1.000
chr15	45410409	45410538	reg1010884.p1	10.709	+	TSC_hg19_v1_chr15_+_45406523 NM_207581 AK303955 BC137465 BX537581 DQ489734	-3879	+	TSC_hg19_v1_chr15_-_45406363 AF267981 NM_014080	-4110	-	TSC_hg19_v1_chr15_-_45406336 AF230496	-4142	-	BC029819 NM_144565 AK292771 BC020841 TSC_hg19_v1_chr15_-_45422078 AK056896	11595	-	AK290372 AF213465 NM_017434 NM_175940 AK075268 AF230495 BC114628 BC114938	11693	+	TSC_hg19_v1_chr15_-_45480165 AK094391 AK303749	69691	-	NM_207581|DUOXA2|405753|dual oxidase maturation factor 2##AK303955|DUOXA2|405753|dual oxidase maturation factor 2##BC137465|DUOXA2|405753|dual oxidase maturation factor 2##BX537581|DUOXA2|405753|dual oxidase maturation factor 2##DQ489734|DUOXA2|405753|dual oxidase maturation factor 2##AF267981|DUOX2|50506|dual oxidase 2##NM_014080|DUOX2|50506|dual oxidase 2##AF230496|DUOX2|50506|dual oxidase 2##BC029819|DUOXA1|90527|dual oxidase maturation factor 1##NM_144565|DUOXA1|90527|dual oxidase maturation factor 1##AK292771|DUOXA1|90527|dual oxidase maturation factor 1##BC020841|DUOXA1|90527|dual oxidase maturation factor 1##AK056896|DUOXA1|90527|dual oxidase maturation factor 1##AK290372|DUOX1|53905|dual oxidase 1##AF213465|DUOX1|53905|dual oxidase 1##NM_017434|DUOX1|53905|dual oxidase 1##NM_175940|DUOX1|53905|dual oxidase 1##AK075268|DUOX1|53905|dual oxidase 1##AF230495|DUOX1|53905|dual oxidase 1##BC114628|DUOX1|53905|dual oxidase 1##BC114938|DUOX1|53905|dual oxidase 1##AK094391|SHF|90525|Src homology 2 domain containing F##AK303749|SHF|90525|Src homology 2 domain containing F	0.724768	CTCF.p2:-19:0.700
chr15	71015089	71015211	reg1011488.p1	10.709	+	BC016881 AL834243 NM_001008224 AK055435	-20523	-	TSC_hg19_v1_chr15_-_70878946 BC040579	-136206	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-624907	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	40692	-	CU675231 BC006082 BC009446 BC014018 AL833876 BC039153 TSC_hg19_v1_chr15_-_71146496 AK130092 AF443828 AF443829 AK002058 NM_018357 NM_197958	131318	-	CU693296 DQ890927 DQ894089 EU176528 AL360202 TSC_hg19_v1_chr15_-_71184737 BC027857 BC072414 AK313472 NM_020147	169541	-	BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC006082|LARP6|55323|La ribonucleoprotein domain family, member 6##BC009446|LARP6|55323|La ribonucleoprotein domain family, member 6##BC014018|LARP6|55323|La ribonucleoprotein domain family, member 6##AL833876|LARP6|55323|La ribonucleoprotein domain family, member 6##BC039153|LARP6|55323|La ribonucleoprotein domain family, member 6##AK130092|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443828|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443829|LARP6|55323|La ribonucleoprotein domain family, member 6##AK002058|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_018357|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_197958|LARP6|55323|La ribonucleoprotein domain family, member 6##DQ890927|THAP10|56906|THAP domain containing 10##DQ894089|THAP10|56906|THAP domain containing 10##EU176528|THAP10|56906|THAP domain containing 10##AL360202|THAP10|56906|THAP domain containing 10##BC027857|THAP10|56906|THAP domain containing 10##BC072414|THAP10|56906|THAP domain containing 10##AK313472|THAP10|56906|THAP domain containing 10##NM_020147|THAP10|56906|THAP domain containing 10	0.99891	CTCF.p2:11:0.999
chr2	92012996	92013113	reg1011277.p1	10.709	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-165051	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-1801336	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-1935300	+	AK097438 BC021716 NM_144705 AK296678 CU692394	3524196	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	3678428	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	3774488	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.802197	CTCF.p2:9:0.802
chrX	57848302	57848404	reg1009355.p1	10.709	+	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-229893	+	NM_007157	-230085	+	NM_174912 AK055766 BC073922 TSC_hg19_v1_chrX_+_57313185 CU687272 EU285560 BC048279	-535138	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	88606	-	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	4722846	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	4799914	-	AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_174912|FAAH2|158584|fatty acid amide hydrolase 2##AK055766|FAAH2|158584|fatty acid amide hydrolase 2##BC073922|FAAH2|158584|fatty acid amide hydrolase 2##EU285560|FAAH2|158584|fatty acid amide hydrolase 2##BC048279|FAAH2|158584|fatty acid amide hydrolase 2##EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249	0.490824	CTCF.p2:-10:0.491
chr10	29738031	29738181	reg1010925.p1	10.708	+	BC031656 TSC_hg19_v1_chr10_+_29698527 BC063483 AL832706	-39589	+	TSC_hg19_v1_chr10_+_29698496 BC073888	-39608	+	BC107795 AK056080 TSC_hg19_v1_chr10_+_29698485	-39621	+	BX648589 TSC_hg19_v1_chr10_-_29754623	16445	-	TSC_hg19_v1_chr10_-_29923841 BC057241 BC070247	185755	-	AF109135 NM_021738 TSC_hg19_v1_chr10_-_29923901	185801	-	BC031656|LOC387647|387647|patched domain containing 3 pseudogene##BC063483|LOC387647|387647|patched domain containing 3 pseudogene##AL832706|LOC387647|387647|patched domain containing 3 pseudogene##BC073888|LOC387647|387647|patched domain containing 3 pseudogene##BC107795|LOC387647|387647|patched domain containing 3 pseudogene##AK056080|LOC387647|387647|patched domain containing 3 pseudogene##BX648589|SVIL|6840|supervillin##AF109135|SVIL|6840|supervillin##NM_021738|SVIL|6840|supervillin	0.999876	CTCF.p2:19:1.000
chr12	92964234	92964379	reg1001984.p2	10.708	+	AJ845168 NM_001025232	-142383	-	AJ845165 AJ845166 NM_001025233	-146572	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-424663	-	NM_001037671 NM_001178097	132312	+	NM_001004330 AK128530	165981	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	358632	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.989042	CTCF.p2:21:0.989
chr18	5073397	5073520	reg1009643.p1	10.708	+	AK316099 NM_001242761 NM_004746 TSC_hg19_v1_chr18_-_4455271	-618188	-	AK304101 TSC_hg19_v1_chr18_-_4455255	-618205	-	AK294777 AK294717 NM_001242762 NM_001242763	-1198731	-	TSC_hg19_v1_chr18_-_5197257 NM_001145194	123794	-	TSC_hg19_v1_chr18_+_5238098 AK056929 BC041875	164645	+	TSC_hg19_v1_chr18_-_5295610 NM_001243702	222195	-	AK316099|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242761|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_004746|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK304101|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42##NM_001243702|ZFP161|7541|zinc finger protein 161 homolog (mouse)	0.545971	CTCF.p2:-8:0.546
chr3	15149717	15149831	reg1008434.p1	10.708	+	TSC_hg19_v1_chr3_-_15140655 AK291288 AK301735 AL833545 NM_022340	-9121	-	TSC_hg19_v1_chr3_-_15140649 BC032628	-9125	-	AB209673 TSC_hg19_v1_chr3_-_15140645	-9140	-	TSC_hg19_v1_chr3_+_15247736 NM_014296	97960	+	TSC_hg19_v1_chr3_+_15247768 AB028639 BC056202 AK314253 CU691130	98180	+	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	224167	-	AK291288|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AK301735|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AL833545|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_022340|ZFYVE20|64145|zinc finger, FYVE domain containing 20##BC032628|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AB209673|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_014296|CAPN7|23473|calpain 7##AB028639|CAPN7|23473|calpain 7##BC056202|CAPN7|23473|calpain 7##AK314253|CAPN7|23473|calpain 7##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	1.024418	CTCF.p2:-1:1.000
chr8	25910845	25910959	reg1010629.p1	10.708	+	BC137106 BC137107 NM_022659 TSC_hg19_v1_chr8_-_25902675 AK001144	-8236	-	TSC_hg19_v1_chr8_+_25316748 AK299278 AL833627 BC015691 BC104450 BC104451	-594068	+	AK292505 TSC_hg19_v1_chr8_+_25316724	-594180	+	TSC_hg19_v1_chr8_+_26149035 NM_002717	238119	+	AK314823 TSC_hg19_v1_chr8_+_26149043 BC041071	238147	+	TSC_hg19_v1_chr8_+_26149092 M64929 AY189686	238292	+	BC137106|EBF2|64641|early B-cell factor 2##BC137107|EBF2|64641|early B-cell factor 2##NM_022659|EBF2|64641|early B-cell factor 2##AK001144|EBF2|64641|early B-cell factor 2##AK299278|CDCA2|157313|cell division cycle associated 2##AL833627|CDCA2|157313|cell division cycle associated 2##BC015691|CDCA2|157313|cell division cycle associated 2##BC104450|CDCA2|157313|cell division cycle associated 2##BC104451|CDCA2|157313|cell division cycle associated 2##AK292505|CDCA2|157313|cell division cycle associated 2##NM_002717|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AK314823|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##BC041071|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##M64929|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AY189686|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha	0.981738	CTCF.p2:-10:0.982
chr18	18759698	18759838	reg1012687.p1	10.707	+	TSC_hg19_v1_chr18_-_18691765 AK057038 NM_005406	-67980	-	TSC_hg19_v1_chr18_-_18691640 AK307388	-68130	-	AF269088 NM_001145029 BC028407	-4011483	+	TSC_hg19_v1_chr18_+_18822192 AB051559 NM_001142966 BC125017	62475	+	TSC_hg19_v1_chr18_-_19180616 AB067498	420851	-	TSC_hg19_v1_chr18_-_19180666 NM_052911 AK096746	420910	-	AK057038|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##NM_005406|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AK307388|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AF269088|ANKRD30B|374860|ankyrin repeat domain 30B##NM_001145029|ANKRD30B|374860|ankyrin repeat domain 30B##BC028407|ANKRD30B|374860|ankyrin repeat domain 30B##AB051559|GREB1L|80000|growth regulation by estrogen in breast cancer-like##NM_001142966|GREB1L|80000|growth regulation by estrogen in breast cancer-like##BC125017|GREB1L|80000|growth regulation by estrogen in breast cancer-like##AB067498|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##NM_052911|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##AK096746|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)	0.999156	CTCF.p2:1:0.999
chr2	242818054	242818175	reg1009345.p1	10.707	+	AK090909 AX746675 BC113517 BC113519 NM_173821	-6232	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	-17090	-	AK091038 AX746745 NM_001167599 NM_001167602 NM_080741 BC012899	-66064	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	212745	+	None	None	None	None	None	None	AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1##AK091038|NEU4|129807|sialidase 4##NM_001167599|NEU4|129807|sialidase 4##NM_001167602|NEU4|129807|sialidase 4##NM_080741|NEU4|129807|sialidase 4##BC012899|NEU4|129807|sialidase 4##AK298283|LOC728323|728323|uncharacterized LOC728323	0.849787	CTCF.p2:29:0.830
chr2	10237614	10237754	reg1011148.p1	10.706	+	TSC_hg19_v1_chr2_-_10220367 AB590068 AF544983 NM_001037160	-17255	-	AK091299 TSC_hg19_v1_chr2_-_10220297	-17448	-	AB463821 TSC_hg19_v1_chr2_+_10186406	-51339	+	NM_001165931 S40301 X59618 TSC_hg19_v1_chr2_+_10262805	25075	+	TSC_hg19_v1_chr2_+_10262865 NM_001034 AK092671 AK123010 AK313719 BC030154 BC001886 DQ891863 DQ895052 AB529158	25205	+	BC093999 BC094001 NM_182626	44295	+	AF544983|CYS1|192668|cystin 1##NM_001037160|CYS1|192668|cystin 1##AK091299|CYS1|192668|cystin 1##NM_001165931|RRM2|6241|ribonucleotide reductase M2##S40301|RRM2|6241|ribonucleotide reductase M2##X59618|RRM2|6241|ribonucleotide reductase M2##NM_001034|RRM2|6241|ribonucleotide reductase M2##AK092671|RRM2|6241|ribonucleotide reductase M2##AK123010|RRM2|6241|ribonucleotide reductase M2##AK313719|RRM2|6241|ribonucleotide reductase M2##BC030154|RRM2|6241|ribonucleotide reductase M2##BC001886|RRM2|6241|ribonucleotide reductase M2##DQ891863|RRM2|6241|ribonucleotide reductase M2##DQ895052|RRM2|6241|ribonucleotide reductase M2##BC093999|C2orf48|348738|chromosome 2 open reading frame 48##BC094001|C2orf48|348738|chromosome 2 open reading frame 48##NM_182626|C2orf48|348738|chromosome 2 open reading frame 48	0.0	
chr10	60941546	60941690	reg1011608.p1	10.705	+	AL365474 NM_001143774 AM393181	-4330	+	BC011268 AK054956 TSC_hg19_v1_chr10_+_60936573 AB384640 AM392743	-5058	+	AL834339 NM_032439 TSC_hg19_v1_chr10_+_60936408 CR749429	-5230	+	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	180667	-	AK299924 NM_001143773	181042	-	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	528106	-	AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)	0.0	
chr13	101780224	101780375	reg1010359.p2	10.704	+	NM_001079669 NM_032813 TSC_hg19_v1_chr13_-_101327108	-453190	-	AK299859 TSC_hg19_v1_chr13_-_101327050 BX648008 AK056409 AK290345 BX647956	-453243	-	TSC_hg19_v1_chr13_-_101241029 AK095850 NM_001195087	-539272	-	AY141972 AK094669 BC012128 NM_052867 TSC_hg19_v1_chr13_-_102068817	288462	-	TSC_hg19_v1_chr13_-_102068838 BC028390	288541	-	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	324696	+	NM_001079669|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##NM_032813|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK095850|A2LD1|87769|AIG2-like domain 1##NM_001195087|A2LD1|87769|AIG2-like domain 1##AY141972|NALCN|259232|sodium leak channel, non-selective##AK094669|NALCN|259232|sodium leak channel, non-selective##BC012128|NALCN|259232|sodium leak channel, non-selective##NM_052867|NALCN|259232|sodium leak channel, non-selective##BC028390|NALCN|259232|sodium leak channel, non-selective##AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	0.995063	CTCF.p2:0:0.995
chr7	88464583	88464690	reg1008524.p2	10.704	+	BC028365 NM_152706	-39606	-	BC140826 BC140829 AK056672 AY295769 NM_181646	-75920	+	BC020600 AF423422 AF423423 AK026806 AK307644 TSC_hg19_v1_chr7_-_87936207 NM_001205315 NM_001205316 NM_024636	-528422	-	NM_012449 TSC_hg19_v1_chr7_+_89783782 AK308452 BC011802	1319101	+	AK304076 TSC_hg19_v1_chr7_+_89783791 AF186249	1319176	+	AF455138 NM_001244944 NM_001244945 NM_152999 AK092666 AX747660 TSC_hg19_v1_chr7_+_89841171 AY008443 AY008444 AY008445 NM_001040665 NM_001244946 AK315043	1376479	+	BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62##BC140826|ZNF804B|219578|zinc finger protein 804B##BC140829|ZNF804B|219578|zinc finger protein 804B##AK056672|ZNF804B|219578|zinc finger protein 804B##AY295769|ZNF804B|219578|zinc finger protein 804B##NM_181646|ZNF804B|219578|zinc finger protein 804B##BC020600|STEAP4|79689|STEAP family member 4##AF423422|STEAP4|79689|STEAP family member 4##AF423423|STEAP4|79689|STEAP family member 4##AK026806|STEAP4|79689|STEAP family member 4##AK307644|STEAP4|79689|STEAP family member 4##NM_001205315|STEAP4|79689|STEAP family member 4##NM_001205316|STEAP4|79689|STEAP family member 4##NM_024636|STEAP4|79689|STEAP family member 4##NM_012449|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK308452|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC011802|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK304076|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF186249|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF455138|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244944|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244945|STEAP2|261729|STEAP family member 2, metalloreductase##NM_152999|STEAP2|261729|STEAP family member 2, metalloreductase##AK092666|STEAP2|261729|STEAP family member 2, metalloreductase##AY008443|STEAP2|261729|STEAP family member 2, metalloreductase##AY008444|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040665|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244946|STEAP2|261729|STEAP family member 2, metalloreductase##AK315043|STEAP2|261729|STEAP family member 2, metalloreductase	0.919321	CTCF.p2:-5:0.919
chr3	13926995	13927130	reg1010181.p1	10.702	+	BC008811 NM_004625	-5445	-	AK304827 NM_001165035	-316823	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	-336399	+	TSC_hg19_v1_chr3_-_14166228 BC017082	239171	-	TSC_hg19_v1_chr3_-_14166250 BC033775	239188	-	TSC_hg19_v1_chr3_-_14166360 AK290764 AK056271	239264	-	BC008811|WNT7A|7476|wingless-type MMTV integration site family, member 7A##NM_004625|WNT7A|7476|wingless-type MMTV integration site family, member 7A##AK304827|FBLN2|2199|fibulin 2##NM_001165035|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2##BC017082|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##BC033775|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##AK290764|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##AK056271|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4	0.996609	CTCF.p2:38:0.997
chr8	133227887	133227999	reg1009802.p2	10.701	+	NM_001145095	-110432	-	AK297911 NM_001080399	-156317	-	BX648595 TSC_hg19_v1_chr8_+_132991247	-236734	+	AK296293 NM_001204824	231565	-	AB208890 AF033347 TSC_hg19_v1_chr8_-_133492689	264680	-	TSC_hg19_v1_chr8_-_133492751 AB527350 BC128576	264844	-	NM_001145095|HHLA1|10086|HERV-H LTR-associating 1##AK297911|OC90|729330|otoconin 90##NM_001080399|OC90|729330|otoconin 90##BX648595|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##AK296293|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##NM_001204824|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3	0.98129	CTCF.p2:3:0.981
chr3	48193125	48193236	reg1008344.p2	10.700	+	TSC_hg19_v1_chr3_-_48130743 AK054577 NM_001134364 NM_002375 NM_030885	-62480	-	TSC_hg19_v1_chr3_-_48130339 BC019229 BC067228 BC051843 M64571 U19727 AB209377 AK307606 BC008715 BC012794 BC015149 AK297242	-62843	-	TSC_hg19_v1_chr3_-_48040260 CU679053 EU831606 EU831693	-152876	-	AF277722 AY137580 EU812118 CU675643 AB590275 DQ890753 DQ892919 DQ896168 AK290554 TSC_hg19_v1_chr3_-_48229511	36248	-	BC007401 BC018642 NM_001789 NM_201567 TSC_hg19_v1_chr3_-_48229900 M81933	36679	-	NM_004345 BC055089 X89658 U19970 CU691114 AB590666 AY251531 Z38026 AY162210 CR457083 CR541961	71738	+	AK054577|MAP4|4134|microtubule-associated protein 4##NM_001134364|MAP4|4134|microtubule-associated protein 4##NM_002375|MAP4|4134|microtubule-associated protein 4##NM_030885|MAP4|4134|microtubule-associated protein 4##BC019229|MAP4|4134|microtubule-associated protein 4##BC067228|MAP4|4134|microtubule-associated protein 4##BC051843|MAP4|4134|microtubule-associated protein 4##M64571|MAP4|4134|microtubule-associated protein 4##U19727|MAP4|4134|microtubule-associated protein 4##AB209377|MAP4|4134|microtubule-associated protein 4##AK307606|MAP4|4134|microtubule-associated protein 4##BC008715|MAP4|4134|microtubule-associated protein 4##BC012794|MAP4|4134|microtubule-associated protein 4##BC015149|MAP4|4134|microtubule-associated protein 4##AK297242|MAP4|4134|microtubule-associated protein 4##EU831606|MAP4|4134|microtubule-associated protein 4##EU831693|MAP4|4134|microtubule-associated protein 4##AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##BC007401|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##BC018642|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_001789|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_201567|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##M81933|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_004345|CAMP|820|cathelicidin antimicrobial peptide##BC055089|CAMP|820|cathelicidin antimicrobial peptide##X89658|CAMP|820|cathelicidin antimicrobial peptide##U19970|CAMP|820|cathelicidin antimicrobial peptide##AY251531|CAMP|820|cathelicidin antimicrobial peptide##Z38026|CAMP|820|cathelicidin antimicrobial peptide##AY162210|CAMP|820|cathelicidin antimicrobial peptide##CR457083|CAMP|820|cathelicidin antimicrobial peptide##CR541961|CAMP|820|cathelicidin antimicrobial peptide	0.188146	
chr4	109493809	109493938	reg1012588.p1	10.700	+	TSC_hg19_v1_chr4_-_109090113 AF288571 AK225772 NM_001130713 NM_001130714 NM_016269	-404074	-	TSC_hg19_v1_chr4_+_109088684 BC020624	-405189	+	AK303272 NM_001166119	-405959	-	BC106009 NM_000995 D28420 TSC_hg19_v1_chr4_+_109541732 BC070208 NM_033625 AK055920 BC001773	47893	+	AY762981 TSC_hg19_v1_chr4_+_109543670	49797	+	TSC_hg19_v1_chr4_+_109571754 NM_021227 BC054857 BC016321 AF161425 AF201937	77880	+	AF288571|LEF1|51176|lymphoid enhancer-binding factor 1##AK225772|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1##NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1##BC020624|LOC641518|641518|uncharacterized LOC641518##AK303272|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1##BC106009|RPL34|6164|ribosomal protein L34##NM_000995|RPL34|6164|ribosomal protein L34##D28420|RPL34|6164|ribosomal protein L34##BC070208|RPL34|6164|ribosomal protein L34##NM_033625|RPL34|6164|ribosomal protein L34##AK055920|RPL34|6164|ribosomal protein L34##BC001773|RPL34|6164|ribosomal protein L34##AY762981|RPL34|6164|ribosomal protein L34##NM_021227|OSTC|58505|oligosaccharyltransferase complex subunit##BC054857|OSTC|58505|oligosaccharyltransferase complex subunit##BC016321|OSTC|58505|oligosaccharyltransferase complex subunit##AF161425|OSTC|58505|oligosaccharyltransferase complex subunit##AF201937|OSTC|58505|oligosaccharyltransferase complex subunit	0.763729	CTCF.p2:3:0.764
chr20	1089214	1089355	reg1009780.p2	10.699	+	AB528812 AK122609 DQ355152 NM_001029871 NM_001040007 TSC_hg19_v1_chr20_-_983029	-106367	-	AB527108 AF113708 BC111976 BC111978 AF074332 NM_015985 AK304756	-192368	-	NM_031424 BC022238 AB196290 DQ431181	-263919	+	AK302164 NM_178578 BC126127 BC126462	4676	+	TSC_hg19_v1_chr20_+_1099244 NM_006814 AK098612 AK294134 D88378 AB590890 HQ258165 AK300667	10069	+	AK002052 NM_018354	75832	-	AK122609|RSPO4|343637|R-spondin 4##DQ355152|RSPO4|343637|R-spondin 4##NM_001029871|RSPO4|343637|R-spondin 4##NM_001040007|RSPO4|343637|R-spondin 4##AF113708|ANGPT4|51378|angiopoietin 4##BC111976|ANGPT4|51378|angiopoietin 4##BC111978|ANGPT4|51378|angiopoietin 4##AF074332|ANGPT4|51378|angiopoietin 4##NM_015985|ANGPT4|51378|angiopoietin 4##AK304756|ANGPT4|51378|angiopoietin 4##NM_031424|FAM110A|83541|family with sequence similarity 110, member A##BC022238|FAM110A|83541|family with sequence similarity 110, member A##AB196290|FAM110A|83541|family with sequence similarity 110, member A##DQ431181|FAM110A|83541|family with sequence similarity 110, member A##AK302164|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##NM_178578|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##BC126127|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##BC126462|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##NM_006814|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK098612|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK294134|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##D88378|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##HQ258165|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK300667|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK002052|TMEM74B|55321|transmembrane protein 74B##NM_018354|TMEM74B|55321|transmembrane protein 74B	0.998238	CTCF.p2:-16:0.998
chr3	141594441	141594579	reg1011792.p1	10.699	+	DQ426875 AF439409 AF282269 NM_139209 AB527155	-97474	+	TSC_hg19_v1_chr3_+_141457160 BC008627 BC005966 DQ891759 DQ894943 AB590187 AF092878 AF142060 AF312226 AK289894 BT007348	-137350	+	TSC_hg19_v1_chr3_+_141457129 AK311982	-137390	+	TSC_hg19_v1_chr3_+_141595484 NM_001679 AK131061 AK293697 BC001469 BC011835	927	+	TSC_hg19_v1_chr3_+_141595539 U51478 CU680074	1067	+	AL080206 NM_001178140	124698	-	AF439409|GRK7|131890|G protein-coupled receptor kinase 7##AF282269|GRK7|131890|G protein-coupled receptor kinase 7##NM_139209|GRK7|131890|G protein-coupled receptor kinase 7##BC008627|RNF7|9616|ring finger protein 7##BC005966|RNF7|9616|ring finger protein 7##DQ891759|RNF7|9616|ring finger protein 7##DQ894943|RNF7|9616|ring finger protein 7##AF092878|RNF7|9616|ring finger protein 7##AF142060|RNF7|9616|ring finger protein 7##AF312226|RNF7|9616|ring finger protein 7##BT007348|RNF7|9616|ring finger protein 7##AK311982|RNF7|9616|ring finger protein 7##NM_001679|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK131061|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK293697|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##BC001469|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##BC011835|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##U51478|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AL080206|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178140|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	0.132723	
chr1	234462481	234462611	reg1012081.p1	10.698	+	TSC_hg19_v1_chr1_+_234350005 BC037878	-112540	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-421934	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-712627	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	46826	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	152314	-	TSC_hg19_v1_chr1_-_234743489 BC020516	280980	-	BC037878|SLC35F3|148641|solute carrier family 35, member F3##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2	0.965925	CTCF.p2:1:0.966
chr15	82728107	82728214	reg1010514.p1	10.698	+	NM_198181 CR936812	-5944	+	TSC_hg19_v1_chr15_+_82647308 BC066934	-80829	+	NM_001164465	-86455	-	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	96733	-	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	216632	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	216730	+	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like	0.799612	CTCF.p2:5:0.800
chr2	101653133	101653267	reg1012015.p1	10.698	+	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	-34478	+	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	-216434	+	TSC_hg19_v1_chr2_+_101179454 NM_024065 BC001021 AK300827 AF110511 AF267853	-473764	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	114583	-	TSC_hg19_v1_chr2_+_101869347 NM_017546	216137	+	TSC_hg19_v1_chr2_+_101869378 AF103798 BC064421 BC018664	216192	+	NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_024065|PDCL3|79031|phosducin-like 3##BC001021|PDCL3|79031|phosducin-like 3##AK300827|PDCL3|79031|phosducin-like 3##AF110511|PDCL3|79031|phosducin-like 3##AF267853|PDCL3|79031|phosducin-like 3##AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_017546|C2orf29|55571|chromosome 2 open reading frame 29##AF103798|C2orf29|55571|chromosome 2 open reading frame 29##BC064421|C2orf29|55571|chromosome 2 open reading frame 29##BC018664|C2orf29|55571|chromosome 2 open reading frame 29	0.699416	CTCF.p2:-5:0.699
chr1	33472919	33473031	reg1009639.p1	10.697	+	NM_001127361 NM_153341 TSC_hg19_v1_chr1_-_33430415 AK131439	-42579	-	AY359883 TSC_hg19_v1_chr1_-_33366959 AY027543 BC020497 BC001418 BC013953 NM_033504 BC023260	-106041	-	TSC_hg19_v1_chr1_+_33352097 DQ426877 AK313907 BC001777 NM_002143	-120891	+	AB451267 AB451394 AY080900 U54645 BC009405 AK307731 TSC_hg19_v1_chr1_-_33502450 AK295105 AK296863 BC026705 AK291676 AK297036	29464	-	TSC_hg19_v1_chr1_-_33502463 BC070127 BC090040 U84371 U39945 AY080899	29482	-	TSC_hg19_v1_chr1_-_33502465 AB005621	29491	-	NM_001127361|RNF19B|127544|ring finger protein 19B##NM_153341|RNF19B|127544|ring finger protein 19B##AK131439|RNF19B|127544|ring finger protein 19B##AY359883|TMEM54|113452|transmembrane protein 54##AY027543|TMEM54|113452|transmembrane protein 54##BC020497|TMEM54|113452|transmembrane protein 54##BC001418|TMEM54|113452|transmembrane protein 54##BC013953|TMEM54|113452|transmembrane protein 54##NM_033504|TMEM54|113452|transmembrane protein 54##BC023260|TMEM54|113452|transmembrane protein 54##DQ426877|HPCA|3208|hippocalcin##AK313907|HPCA|3208|hippocalcin##BC001777|HPCA|3208|hippocalcin##NM_002143|HPCA|3208|hippocalcin##AB451267|AK2|204|adenylate kinase 2##AB451394|AK2|204|adenylate kinase 2##AY080900|AK2|204|adenylate kinase 2##U54645|AK2|204|adenylate kinase 2##BC009405|AK2|204|adenylate kinase 2##AK307731|AK2|204|adenylate kinase 2##AK295105|AK2|204|adenylate kinase 2##AK296863|AK2|204|adenylate kinase 2##BC026705|AK2|204|adenylate kinase 2##AK291676|AK2|204|adenylate kinase 2##AK297036|AK2|204|adenylate kinase 2##BC070127|AK2|204|adenylate kinase 2##BC090040|AK2|204|adenylate kinase 2##U84371|AK2|204|adenylate kinase 2##U39945|AK2|204|adenylate kinase 2##AY080899|AK2|204|adenylate kinase 2##AB005621|AK2|204|adenylate kinase 2	0.063712	
chr6	227384	227565	reg1010029.p1	10.697	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	64611	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	65023	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	164290	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	1.180471	CTCF.p2:-64:0.543	CTCF.p2:84:0.637
chr8	110338185	110338310	reg1011839.p1	10.697	+	BC105045 BC113360 NM_003301 X72089 D16845 AY493373 HQ258206 X75071	-238551	+	AK055230 NM_153015 BC033057 BC030710	-538441	-	TSC_hg19_v1_chr8_+_109455874 AK290974 D14659 AB384437 CR457402 CU676696 CU692380 HQ447150	-882367	+	AF283302 AK311583 AF521133 NM_001128211 AK307663	3887	-	AK301278 TSC_hg19_v1_chr8_-_110346317 BC000967 AK027897 BC043406 AK315006 BC031258 NM_032869 AF283301	8124	-	TSC_hg19_v1_chr8_+_110346575 NM_001193557 NM_020189 AK095651 AK316560 AK000487 AK290752 BC051878 BC007870	8346	+	BC105045|TRHR|7201|thyrotropin-releasing hormone receptor##BC113360|TRHR|7201|thyrotropin-releasing hormone receptor##NM_003301|TRHR|7201|thyrotropin-releasing hormone receptor##X72089|TRHR|7201|thyrotropin-releasing hormone receptor##D16845|TRHR|7201|thyrotropin-releasing hormone receptor##AY493373|TRHR|7201|thyrotropin-releasing hormone receptor##HQ258206|TRHR|7201|thyrotropin-releasing hormone receptor##X75071|TRHR|7201|thyrotropin-releasing hormone receptor##AK055230|TMEM74|157753|transmembrane protein 74##NM_153015|TMEM74|157753|transmembrane protein 74##BC030710|TMEM74|157753|transmembrane protein 74##AK290974|TTC35|9694|tetratricopeptide repeat domain 35##D14659|TTC35|9694|tetratricopeptide repeat domain 35##CR457402|TTC35|9694|tetratricopeptide repeat domain 35##HQ447150|TTC35|9694|tetratricopeptide repeat domain 35##AF283302|NUDCD1|84955|NudC domain containing 1##AK311583|NUDCD1|84955|NudC domain containing 1##AF521133|NUDCD1|84955|NudC domain containing 1##NM_001128211|NUDCD1|84955|NudC domain containing 1##AK307663|NUDCD1|84955|NudC domain containing 1##AK301278|NUDCD1|84955|NudC domain containing 1##BC000967|NUDCD1|84955|NudC domain containing 1##AK027897|NUDCD1|84955|NudC domain containing 1##BC043406|NUDCD1|84955|NudC domain containing 1##AK315006|NUDCD1|84955|NudC domain containing 1##BC031258|NUDCD1|84955|NudC domain containing 1##NM_032869|NUDCD1|84955|NudC domain containing 1##AF283301|NUDCD1|84955|NudC domain containing 1##NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	0.0	
chrX	46414541	46414694	reg1008824.p1	10.697	+	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	-9673	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	-9761	-	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	-107906	+	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	18661	+	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	203912	-	TSC_hg19_v1_chrX_-_46618608 BC094742	204013	-	BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##BC094742|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7	0.832378	CTCF.p2:-3:0.832
chr17	45020026	45020161	reg1011147.p1	10.696	+	TSC_hg19_v1_chr17_+_45000525 AK303650 AK290890 BC009710 AF229796 BC034762 CU679451 AF007548 DQ891461 DQ894638	-19548	+	TSC_hg19_v1_chr17_+_45000492 NM_001012511 NM_004287 NM_054022	-19606	+	AY358217 AK127615 AB063483 NM_003396 BC064534 AB590853	-91119	+	BC108690 BC033942 NM_203400	36507	-	CU679998 AB384784 DQ892780 DQ896027 BC011656 DQ786193 TSC_hg19_v1_chr17_-_45266619 U00001 AK296881 S78234	246485	-	TSC_hg19_v1_chr17_-_45266641 AK299342	246546	-	AK290890|GOSR2|9570|golgi SNAP receptor complex member 2##BC009710|GOSR2|9570|golgi SNAP receptor complex member 2##AF229796|GOSR2|9570|golgi SNAP receptor complex member 2##BC034762|GOSR2|9570|golgi SNAP receptor complex member 2##AF007548|GOSR2|9570|golgi SNAP receptor complex member 2##DQ891461|GOSR2|9570|golgi SNAP receptor complex member 2##DQ894638|GOSR2|9570|golgi SNAP receptor complex member 2##NM_001012511|GOSR2|9570|golgi SNAP receptor complex member 2##NM_004287|GOSR2|9570|golgi SNAP receptor complex member 2##NM_054022|GOSR2|9570|golgi SNAP receptor complex member 2##AY358217|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AK127615|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AB063483|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_003396|WNT9B|7484|wingless-type MMTV integration site family, member 9B##BC064534|WNT9B|7484|wingless-type MMTV integration site family, member 9B##BC108690|RPRML|388394|reprimo-like##BC033942|RPRML|388394|reprimo-like##NM_203400|RPRML|388394|reprimo-like##DQ892780|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##DQ896027|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##BC011656|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##DQ786193|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##U00001|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##AK296881|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##S78234|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##AK299342|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)	0.950886	CTCF.p2:-20:0.951
chr5	142393728	142393861	reg1010717.p1	10.696	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-243486	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-243822	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-316223	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	389029	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	389312	-	BC015610 TSC_hg19_v1_chr5_-_142783214	389417	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.189711	
chr9	80048722	80048852	reg1011573.p1	10.696	+	AK027023 TSC_hg19_v1_chr9_+_79968352	-80439	+	TSC_hg19_v1_chr9_+_79792474 AB054005	-256279	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	-256448	+	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	214444	-	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	597397	-	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	802243	+	AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa	0.810215	CTCF.p2:-5:0.810
chrX	24389618	24389761	reg1011666.p1	10.696	+	NM_001136234	-8812	+	NM_001136233	-58258	-	X59739 X59740 TSC_hg19_v1_chrX_+_24167864	-221817	+	NM_001142386 NM_005391 AK301965 TSC_hg19_v1_chrX_+_24483405 BC015948 L42452 CU677533	93768	+	AF148464 AF052510 TSC_hg19_v1_chrX_-_24665422	275636	-	AK315323 NM_001163265 NM_004845 TSC_hg19_v1_chrX_-_24665465	275770	-	NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1##NM_001136233|FAM48B2|170067|family with sequence similarity 48, member B2##X59739|ZFX|7543|zinc finger protein, X-linked##X59740|ZFX|7543|zinc finger protein, X-linked##NM_001142386|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_005391|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AK301965|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##BC015948|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##L42452|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	0.998842	CTCF.p2:2:0.999
chr20	35548248	35548365	reg1011250.p1	10.695	+	TSC_hg19_v1_chr20_+_35504544 BC127688 BC130646 BC130648 AK123544 NM_080628 HQ258755	-43757	+	TSC_hg19_v1_chr20_-_35492072 NM_080627	-56172	-	AK126630 NM_199181	-60031	-	AB013847 CU690348 TSC_hg19_v1_chr20_-_35580085 BC036450 AK304187 AB208944	31766	-	TSC_hg19_v1_chr20_-_35580112 AK304795 AL050267	31807	-	AF228421 AK315169 TSC_hg19_v1_chr20_-_35580179	31871	-	BC127688|C20orf118|140711|chromosome 20 open reading frame 118##BC130646|C20orf118|140711|chromosome 20 open reading frame 118##BC130648|C20orf118|140711|chromosome 20 open reading frame 118##AK123544|C20orf118|140711|chromosome 20 open reading frame 118##NM_080628|C20orf118|140711|chromosome 20 open reading frame 118##HQ258755|C20orf118|140711|chromosome 20 open reading frame 118##NM_080627|KIAA0889|140710|KIAA0889##AK126630|KIAA0889|140710|KIAA0889##NM_199181|KIAA0889|140710|KIAA0889##AB013847|SAMHD1|25939|SAM domain and HD domain 1##BC036450|SAMHD1|25939|SAM domain and HD domain 1##AK304187|SAMHD1|25939|SAM domain and HD domain 1##AB208944|SAMHD1|25939|SAM domain and HD domain 1##AK304795|SAMHD1|25939|SAM domain and HD domain 1##AL050267|SAMHD1|25939|SAM domain and HD domain 1##AF228421|SAMHD1|25939|SAM domain and HD domain 1##AK315169|SAMHD1|25939|SAM domain and HD domain 1	0.991799	CTCF.p2:1:0.992
chr17	41416408	41416541	reg1011826.p1	10.694	+	TSC_hg19_v1_chr17_+_41363905 AK056132 AK290387 AK299974 AK301571 NM_145041	-52595	+	TSC_hg19_v1_chr17_+_41323230 AK299328 AK290005 AK297425 BC012591 X76952 NM_005899 BC009808 AY450308	-93252	+	TSC_hg19_v1_chr17_+_41322538 D30756 NM_031862 AF227189 NM_031858	-93981	+	AL832479 TSC_hg19_v1_chr17_-_41465694 AK123585 AK311685	49216	-	TSC_hg19_v1_chr17_+_41476360 NM_001661 AK314951 BC000043 AB060692 L38490	59893	+	AK294046 TSC_hg19_v1_chr17_+_41561351 BC020697 AK303319 D50487 NM_004941 AK291664	144823	+	AK056132|TMEM106A|113277|transmembrane protein 106A##AK290387|TMEM106A|113277|transmembrane protein 106A##AK299974|TMEM106A|113277|transmembrane protein 106A##AK301571|TMEM106A|113277|transmembrane protein 106A##NM_145041|TMEM106A|113277|transmembrane protein 106A##AK299328|NBR1|4077|neighbor of BRCA1 gene 1##AK290005|NBR1|4077|neighbor of BRCA1 gene 1##AK297425|NBR1|4077|neighbor of BRCA1 gene 1##X76952|NBR1|4077|neighbor of BRCA1 gene 1##NM_005899|NBR1|4077|neighbor of BRCA1 gene 1##BC009808|NBR1|4077|neighbor of BRCA1 gene 1##AY450308|NBR1|4077|neighbor of BRCA1 gene 1##D30756|NBR1|4077|neighbor of BRCA1 gene 1##NM_031862|NBR1|4077|neighbor of BRCA1 gene 1##AF227189|NBR1|4077|neighbor of BRCA1 gene 1##NM_031858|NBR1|4077|neighbor of BRCA1 gene 1##AL832479|LOC100130581|100130581|uncharacterized LOC100130581##AK123585|LOC100130581|100130581|uncharacterized LOC100130581##AK311685|LOC100130581|100130581|uncharacterized LOC100130581##NM_001661|ARL4D|379|ADP-ribosylation factor-like 4D##AK314951|ARL4D|379|ADP-ribosylation factor-like 4D##BC000043|ARL4D|379|ADP-ribosylation factor-like 4D##AB060692|ARL4D|379|ADP-ribosylation factor-like 4D##L38490|ARL4D|379|ADP-ribosylation factor-like 4D##AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	0.830069	CTCF.p2:1:0.830
chr10	102728992	102729103	reg1009764.p2	10.693	+	TSC_hg19_v1_chr10_+_102672719 AK292565 AL832343 AL833126 BC015131 BC047715 BC030565 BC064526 BC020915 BC073832 AL832383 AB385255	-56272	+	AF460991 AF460992 NM_001136123 NM_001243770 NM_018121	-56722	+	TSC_hg19_v1_chr10_+_102505338 L25597 M89470 NM_000278 NM_003987 NM_003988 NM_003989 NM_003990	-223645	+	TSC_hg19_v1_chr10_+_102729286 BC051030 AK297431	229	+	NM_001203244 NM_017893	3238	+	AF086122 TSC_hg19_v1_chr10_-_102747046 BC031287	17995	-	AK292565|FAM178A|55719|family with sequence similarity 178, member A##AL832343|FAM178A|55719|family with sequence similarity 178, member A##AL833126|FAM178A|55719|family with sequence similarity 178, member A##BC015131|FAM178A|55719|family with sequence similarity 178, member A##BC047715|FAM178A|55719|family with sequence similarity 178, member A##BC030565|FAM178A|55719|family with sequence similarity 178, member A##BC064526|FAM178A|55719|family with sequence similarity 178, member A##BC020915|FAM178A|55719|family with sequence similarity 178, member A##BC073832|FAM178A|55719|family with sequence similarity 178, member A##AL832383|FAM178A|55719|family with sequence similarity 178, member A##AF460991|FAM178A|55719|family with sequence similarity 178, member A##AF460992|FAM178A|55719|family with sequence similarity 178, member A##NM_001136123|FAM178A|55719|family with sequence similarity 178, member A##NM_001243770|FAM178A|55719|family with sequence similarity 178, member A##NM_018121|FAM178A|55719|family with sequence similarity 178, member A##L25597|PAX2|5076|paired box 2##M89470|PAX2|5076|paired box 2##NM_000278|PAX2|5076|paired box 2##NM_003987|PAX2|5076|paired box 2##NM_003988|PAX2|5076|paired box 2##NM_003989|PAX2|5076|paired box 2##NM_003990|PAX2|5076|paired box 2##BC051030|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G##AK297431|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G##NM_001203244|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G##NM_017893|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G##AF086122|MRPL43|84545|mitochondrial ribosomal protein L43##BC031287|MRPL43|84545|mitochondrial ribosomal protein L43	0.961418	CTCF.p2:-6:0.961
chrX	123540645	123540783	reg1012116.p1	10.693	+	NM_001114937 NM_002351 AL023657 AK311645	-60539	+	AK026678 TSC_hg19_v1_chrX_+_123234596	-306184	+	TSC_hg19_v1_chrX_+_123095638 BC001765	-445077	+	HE578281 BC140783 BC144542 BC144543 AF100772 NM_001163278 NM_001163279 NM_014253	556919	-	NM_001195272	913254	+	BC136673 BC136674 NM_001013628	1759365	-	NM_001114937|SH2D1A|4068|SH2 domain containing 1A##NM_002351|SH2D1A|4068|SH2 domain containing 1A##AL023657|SH2D1A|4068|SH2 domain containing 1A##AK311645|SH2D1A|4068|SH2 domain containing 1A##AK026678|STAG2|10735|stromal antigen 2##BC001765|STAG2|10735|stromal antigen 2##BC140783|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144542|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144543|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##AF100772|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163278|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163279|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_014253|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001195272|LOC100129520|100129520|testis expressed sequence 13-like##BC136673|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##BC136674|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##NM_001013628|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2	0.869562	CTCF.p2:-7:0.870
chr11	103472117	103472244	reg1011165.p1	10.692	+	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	-491981	+	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	-509257	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	-509439	-	NM_001001711 AF429971 AK093336 AX748060 BC022018 BC022017 BC021710 BC021172	435158	+	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	562614	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	562860	-	AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_001001711|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AF429971|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK093336|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022018|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022017|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021710|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021172|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D	0.963823	CTCF.p2:-3:0.964
chr3	128145281	128145391	reg1006871.p1	10.692	+	TSC_hg19_v1_chr3_+_127872325 BC007933 AF268872	-272898	+	TSC_hg19_v1_chr3_+_127872314 NM_021937	-273027	+	AB451224 AB451347 AB590226 BT007057 DQ469310 DQ891448 DQ894627 BC012886 TSC_hg19_v1_chr3_-_127842656 AB012122 AF099084 BC000519 BC002993 AF070735 AJ010058 AK222575 Y18418 AK222563 AK312290 NM_003707	-302713	-	BC050288 NM_153330	40754	-	TSC_hg19_v1_chr3_+_128199744 CU677364 CU678039	54467	+	M77810 BC015577 BC018988 BC051272 NM_001145662 M68891 TSC_hg19_v1_chr3_-_128206775	61403	-	BC007933|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AF268872|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##NM_021937|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AB451224|RUVBL1|8607|RuvB-like 1 (E. coli)##AB451347|RUVBL1|8607|RuvB-like 1 (E. coli)##BT007057|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ469310|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ891448|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ894627|RUVBL1|8607|RuvB-like 1 (E. coli)##BC012886|RUVBL1|8607|RuvB-like 1 (E. coli)##AB012122|RUVBL1|8607|RuvB-like 1 (E. coli)##AF099084|RUVBL1|8607|RuvB-like 1 (E. coli)##BC002993|RUVBL1|8607|RuvB-like 1 (E. coli)##AF070735|RUVBL1|8607|RuvB-like 1 (E. coli)##AJ010058|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222575|RUVBL1|8607|RuvB-like 1 (E. coli)##Y18418|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222563|RUVBL1|8607|RuvB-like 1 (E. coli)##AK312290|RUVBL1|8607|RuvB-like 1 (E. coli)##NM_003707|RUVBL1|8607|RuvB-like 1 (E. coli)##BC050288|DNAJB8|165721|DnaJ (Hsp40) homolog, subfamily B, member 8##NM_153330|DNAJB8|165721|DnaJ (Hsp40) homolog, subfamily B, member 8##M77810|GATA2|2624|GATA binding protein 2##BC015577|GATA2|2624|GATA binding protein 2##BC018988|GATA2|2624|GATA binding protein 2##BC051272|GATA2|2624|GATA binding protein 2##NM_001145662|GATA2|2624|GATA binding protein 2##M68891|GATA2|2624|GATA binding protein 2	0.291183	CTCF.p2:7:0.291
chr4	143768536	143768639	reg1009977.p1	10.692	+	NM_001101669 NM_003866	-984	-	AK290619 NM_000585 NM_172175 BC018149 U14407	-1210821	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-1626501	+	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	337477	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	337538	+	NM_002039 NM_207123 AK289767 BC064848	489428	+	NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38##NM_002039|GAB1|2549|GRB2-associated binding protein 1##NM_207123|GAB1|2549|GRB2-associated binding protein 1##AK289767|GAB1|2549|GRB2-associated binding protein 1##BC064848|GAB1|2549|GRB2-associated binding protein 1	0.881255	CTCF.p2:10:0.881
chr4	3049251	3049364	reg1007784.p1	10.692	+	TSC_hg19_v1_chr4_+_2965297 AK292390 AK223581 NM_001004056 NM_001004057 NM_182982 BC110825 BC027597 BC039732 BC117320 U33054 U33055 U33056 AK293569 X97879 X97880 X97881 X98118 HQ258463 X75897	-83772	+	TSC_hg19_v1_chr4_-_2965155 AK292939	-84113	-	BC053635 TSC_hg19_v1_chr4_-_2965134 BC017358 NM_003703	-84184	-	L12392 TSC_hg19_v1_chr4_+_3076416 AB016794 NM_002111	27020	+	AK126094 NM_001042690	201459	+	TSC_hg19_v1_chr4_+_3294763 AK310999 BC028154	245453	+	AK292390|GRK4|2868|G protein-coupled receptor kinase 4##AK223581|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004056|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004057|GRK4|2868|G protein-coupled receptor kinase 4##NM_182982|GRK4|2868|G protein-coupled receptor kinase 4##BC027597|GRK4|2868|G protein-coupled receptor kinase 4##BC117320|GRK4|2868|G protein-coupled receptor kinase 4##U33054|GRK4|2868|G protein-coupled receptor kinase 4##U33055|GRK4|2868|G protein-coupled receptor kinase 4##U33056|GRK4|2868|G protein-coupled receptor kinase 4##X97879|GRK4|2868|G protein-coupled receptor kinase 4##X97880|GRK4|2868|G protein-coupled receptor kinase 4##X97881|GRK4|2868|G protein-coupled receptor kinase 4##X98118|GRK4|2868|G protein-coupled receptor kinase 4##HQ258463|GRK4|2868|G protein-coupled receptor kinase 4##X75897|GRK4|2868|G protein-coupled receptor kinase 4##AK292939|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC053635|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC017358|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##NM_003703|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##L12392|HTT|3064|huntingtin##AB016794|HTT|3064|huntingtin##NM_002111|HTT|3064|huntingtin##AK126094|C4orf44|345222|chromosome 4 open reading frame 44##NM_001042690|C4orf44|345222|chromosome 4 open reading frame 44##AK310999|RGS12|6002|regulator of G-protein signaling 12##BC028154|RGS12|6002|regulator of G-protein signaling 12	0.957154	CTCF.p2:-11:0.957
chr3	52776569	52776703	reg1011312.p1	10.691	+	TSC_hg19_v1_chr3_+_52740115 AF092138 AK027426 AX775781 AX775783 AX775833 L38852 AX775787 BC000884	-36510	+	TSC_hg19_v1_chr3_-_52740047 NM_001010983 NM_018446	-36600	-	NM_014041	-36780	+	AK294165 TSC_hg19_v1_chr3_-_52804957 BC015515 L20321 AK312420 BC063044 EF560744 NM_001193533 NM_003157	28297	-	NM_002215 AK298398 TSC_hg19_v1_chr3_+_52811614 BC069464 X63652 AK298423 BC109115 AK292750 AK314198	34980	+	X16260 NM_001166434 AK298455	35844	+	AF092138|SPCS1|28972|signal peptidase complex subunit 1 homolog (S. cerevisiae)##AK027426|SPCS1|28972|signal peptidase complex subunit 1 homolog (S. cerevisiae)##AX775783|SPCS1|28972|signal peptidase complex subunit 1 homolog (S. cerevisiae)##AX775833|SPCS1|28972|signal peptidase complex subunit 1 homolog (S. cerevisiae)##L38852|SPCS1|28972|signal peptidase complex subunit 1 homolog (S. cerevisiae)##AX775787|SPCS1|28972|signal peptidase complex subunit 1 homolog (S. cerevisiae)##BC000884|SPCS1|28972|signal peptidase complex subunit 1 homolog (S. cerevisiae)##NM_001010983|GLT8D1|55830|glycosyltransferase 8 domain containing 1##NM_018446|GLT8D1|55830|glycosyltransferase 8 domain containing 1##NM_014041|SPCS1|28972|signal peptidase complex subunit 1 homolog (S. cerevisiae)##AK294165|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4##BC015515|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4##L20321|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4##AK312420|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4##BC063044|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4##EF560744|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4##NM_001193533|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4##NM_003157|NEK4|6787|NIMA (never in mitosis gene a)-related kinase 4##NM_002215|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##AK298398|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##BC069464|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##X63652|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##AK298423|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##BC109115|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##AK292750|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##AK314198|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##X16260|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##NM_001166434|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##AK298455|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1	0.931526	CTCF.p2:-16:0.932
chr8	41393490	41393644	reg1010183.p1	10.691	+	TSC_hg19_v1_chr8_+_41386779 AK095334 AK313373	-6795	+	NM_032336 AK299207 BC027454 TSC_hg19_v1_chr8_+_41386745 BC005995	-6830	+	AF068291 TSC_hg19_v1_chr8_+_41348140 BC012032 NM_001002296	-45418	+	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	42127	+	AB587362 AK057898 NM_152568	111308	-	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	129196	-	AK095334|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK313373|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##NM_032336|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK299207|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC027454|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC005995|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AF068291|GOLGA7|51125|golgin A7##BC012032|GOLGA7|51125|golgin A7##NM_001002296|GOLGA7|51125|golgin A7##NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic	0.72183	CTCF.p2:22:0.722
chr19	34827834	34827980	reg1012090.p1	10.690	+	TSC_hg19_v1_chr19_+_34745535 NM_014686 AB002353 BX648432	-82397	+	TSC_hg19_v1_chr19_+_34710343 AL117499	-117527	+	TSC_hg19_v1_chr19_+_34663440 AL834398 AK027643 AB069974 AB069975	-164439	+	TSC_hg19_v1_chr19_+_34856083 NM_001184722 AK294396 NM_000175	27933	+	TSC_hg19_v1_chr19_+_34856150 AB209575 AK301103	28231	+	AK293446 TSC_hg19_v1_chr19_+_34856160 BC004982 K03515 X16539 DQ892924 DQ896173	28255	+	NM_014686|KIAA0355|9710|KIAA0355##AB002353|KIAA0355|9710|KIAA0355##AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AL834398|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK027643|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069974|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069975|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_001184722|GPI|2821|glucose-6-phosphate isomerase##AK294396|GPI|2821|glucose-6-phosphate isomerase##NM_000175|GPI|2821|glucose-6-phosphate isomerase##AB209575|GPI|2821|glucose-6-phosphate isomerase##AK301103|GPI|2821|glucose-6-phosphate isomerase##AK293446|GPI|2821|glucose-6-phosphate isomerase##BC004982|GPI|2821|glucose-6-phosphate isomerase##K03515|GPI|2821|glucose-6-phosphate isomerase##X16539|GPI|2821|glucose-6-phosphate isomerase##DQ892924|GPI|2821|glucose-6-phosphate isomerase##DQ896173|GPI|2821|glucose-6-phosphate isomerase	0.968033	CTCF.p2:9:0.968
chr3	139048313	139048414	reg1008254.p2	10.690	+	AK128089 NM_001134657	-284630	-	BC137146 BC137145 AK127998 NM_001013650	-308605	-	NM_001134659	-323254	-	TSC_hg19_v1_chr3_+_139062861 AF226045 NM_020191 AF063603 AK292852 BC009296 AK075436 AB208981	14527	+	TSC_hg19_v1_chr3_-_139108462 AK304219 X70476 BC000326	60081	-	TSC_hg19_v1_chr3_-_139108486 AK128561	60134	-	AK128089|PRR23C|389152|proline rich 23C##NM_001134657|PRR23C|389152|proline rich 23C##BC137146|PRR23B|389151|proline rich 23B##BC137145|PRR23B|389151|proline rich 23B##AK127998|PRR23B|389151|proline rich 23B##NM_001013650|PRR23B|389151|proline rich 23B##NM_001134659|PRR23A|729627|proline rich 23A##AF226045|MRPS22|56945|mitochondrial ribosomal protein S22##NM_020191|MRPS22|56945|mitochondrial ribosomal protein S22##AF063603|MRPS22|56945|mitochondrial ribosomal protein S22##AK292852|MRPS22|56945|mitochondrial ribosomal protein S22##BC009296|MRPS22|56945|mitochondrial ribosomal protein S22##AK075436|MRPS22|56945|mitochondrial ribosomal protein S22##AB208981|MRPS22|56945|mitochondrial ribosomal protein S22##AK304219|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##X70476|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##BC000326|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)	0.989103	CTCF.p2:-4:0.989
chr7	156701705	156701845	reg1011921.p1	10.690	+	TSC_hg19_v1_chr7_-_156685878 NM_022458	-15859	-	TSC_hg19_v1_chr7_-_156685868 AL834394 AB463099 AM392621 AM393143 AM393254 AM393828 CU676016 AF402318 BC017663 BC063649 AF107454 AK021727 AK291037 AK299753	-16028	-	TSC_hg19_v1_chr7_-_156468370 CU688401	-233353	-	TSC_hg19_v1_chr7_+_156742419 AY576779 NM_138400	40640	+	TSC_hg19_v1_chr7_+_156798463 AY927456 AY927462 AY927463 AY927458	96725	+	AY927459 AY927461 TSC_hg19_v1_chr7_-_156802024 AY927460 AY927464 NM_001165255	100279	-	NM_022458|LMBR1|64327|limb region 1 homolog (mouse)##AL834394|LMBR1|64327|limb region 1 homolog (mouse)##AM392621|LMBR1|64327|limb region 1 homolog (mouse)##AM393143|LMBR1|64327|limb region 1 homolog (mouse)##AM393254|LMBR1|64327|limb region 1 homolog (mouse)##AM393828|LMBR1|64327|limb region 1 homolog (mouse)##AF402318|LMBR1|64327|limb region 1 homolog (mouse)##BC017663|LMBR1|64327|limb region 1 homolog (mouse)##BC063649|LMBR1|64327|limb region 1 homolog (mouse)##AK021727|LMBR1|64327|limb region 1 homolog (mouse)##AK291037|LMBR1|64327|limb region 1 homolog (mouse)##AK299753|LMBR1|64327|limb region 1 homolog (mouse)##AY576779|NOM1|64434|nucleolar protein with MIF4G domain 1##NM_138400|NOM1|64434|nucleolar protein with MIF4G domain 1##AY927462|MNX1|3110|motor neuron and pancreas homeobox 1##AY927459|MNX1|3110|motor neuron and pancreas homeobox 1##AY927461|MNX1|3110|motor neuron and pancreas homeobox 1##AY927460|MNX1|3110|motor neuron and pancreas homeobox 1##AY927464|MNX1|3110|motor neuron and pancreas homeobox 1##NM_001165255|MNX1|3110|motor neuron and pancreas homeobox 1	0.0	
chr10	116454619	116454755	reg1011924.p1	10.689	+	TSC_hg19_v1_chr10_-_116444374 NM_001003407 NM_001003408	-10294	-	AB462929 TSC_hg19_v1_chr10_-_116444183 D31883	-10524	-	AF005654 NM_002313	-36631	-	TSC_hg19_v1_chr10_-_116528049 AK057834	73321	-	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	126862	+	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	243276	+	NM_001003407|ABLIM1|3983|actin binding LIM protein 1##NM_001003408|ABLIM1|3983|actin binding LIM protein 1##D31883|ABLIM1|3983|actin binding LIM protein 1##AF005654|ABLIM1|3983|actin binding LIM protein 1##NM_002313|ABLIM1|3983|actin binding LIM protein 1##AK057834|ABLIM1|3983|actin binding LIM protein 1##BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)	0.352454	CTCF.p2:-5:0.352
chr12	49482155	49482280	reg1009768.p2	10.689	+	BC014155 BC027482 NM_144593 AK098663 AY509932 AY327412	-18449	-	AF010403 NM_003482	-33111	-	TSC_hg19_v1_chr12_-_49412538 AK293332 NM_001206710 AK303276 AK307994 AK310250 BC000358 AK097606 NM_001206709 NM_002733	-69646	-	AK313360 BC033507 HQ607677 HQ607678 NM_021044	6368	-	CU677167 CU678919 CU689172 DQ892407 DQ895619 TSC_hg19_v1_chr12_-_49504467 BC015015 BC031550 AB033000 AK001356	22208	-	BC008337 TSC_hg19_v1_chr12_-_49504631 AK001651 AK298026	22406	-	BC014155|RHEBL1|121268|Ras homolog enriched in brain like 1##BC027482|RHEBL1|121268|Ras homolog enriched in brain like 1##NM_144593|RHEBL1|121268|Ras homolog enriched in brain like 1##AK098663|RHEBL1|121268|Ras homolog enriched in brain like 1##AY509932|RHEBL1|121268|Ras homolog enriched in brain like 1##AY327412|RHEBL1|121268|Ras homolog enriched in brain like 1##AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##AK293332|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206710|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK303276|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK307994|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK310250|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##BC000358|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK097606|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206709|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_002733|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK313360|DHH|50846|desert hedgehog##BC033507|DHH|50846|desert hedgehog##HQ607677|DHH|50846|desert hedgehog##HQ607678|DHH|50846|desert hedgehog##NM_021044|DHH|50846|desert hedgehog##DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like##DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like##AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC008337|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK001651|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK298026|LMBR1L|55716|limb region 1 homolog (mouse)-like	0.999582	CTCF.p2:0:1.000
chr12	69647855	69647986	reg1009364.p1	10.689	+	TSC_hg19_v1_chr12_+_69633357 BC005000 BC000714 X67337 AK292024 CU674352 CU678850 DQ892159 EU176688	-14531	+	NM_007007 TSC_hg19_v1_chr12_+_69633348 AK223568 AK299928	-14587	+	J04970 NM_001874 AK127859	-290901	-	TSC_hg19_v1_chr12_+_69742133 AK130149 NM_000239	94211	+	TSC_hg19_v1_chr12_+_69742163 AK310930 AK311779 J03801 FJ795023 BC004147 M21119 M19045 AB463851 DQ892271 DQ895472 U25677	94289	+	TSC_hg19_v1_chr12_+_69753535 NM_006530 U61384 AJ245746 BC000994 AK001413 AB464359 EU446926	105686	+	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##J04970|CPM|1368|carboxypeptidase M##NM_001874|CPM|1368|carboxypeptidase M##AK127859|CPM|1368|carboxypeptidase M##AK130149|LYZ|4069|lysozyme##NM_000239|LYZ|4069|lysozyme##AK311779|LYZ|4069|lysozyme##J03801|LYZ|4069|lysozyme##FJ795023|LYZ|4069|lysozyme##BC004147|LYZ|4069|lysozyme##M21119|LYZ|4069|lysozyme##M19045|LYZ|4069|lysozyme##DQ892271|LYZ|4069|lysozyme##DQ895472|LYZ|4069|lysozyme##U25677|LYZ|4069|lysozyme##NM_006530|YEATS4|8089|YEATS domain containing 4##U61384|YEATS4|8089|YEATS domain containing 4##AJ245746|YEATS4|8089|YEATS domain containing 4##BC000994|YEATS4|8089|YEATS domain containing 4##AK001413|YEATS4|8089|YEATS domain containing 4##EU446926|YEATS4|8089|YEATS domain containing 4	0.830545	CTCF.p2:12:0.831
chr18	6920139	6920259	reg1008820.p1	10.689	+	NM_001010000 BX648684 AK308259 AK302026	-85734	+	NM_001243517	-408785	+	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	-505284	-	BC144590 NM_005559 X58531	197585	-	NM_001105581	310937	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	647118	+	NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M	0.064117	
chr19	14399768	14399897	reg1011923.p1	10.689	+	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	-82784	-	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	-139032	-	TSC_hg19_v1_chr19_+_14247979 BX537706	-151841	+	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	92217	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	92423	+	TSC_hg19_v1_chr19_-_14529877 AK301847	130057	-	AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule##AK301847|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A	1.012519	CTCF.p2:-2:0.988
chr21	47563542	47563669	reg1006396.p1	10.689	+	M34570 TSC_hg19_v1_chr21_+_47546455	-17164	+	AL360197 TSC_hg19_v1_chr21_+_47545943	-17685	+	TSC_hg19_v1_chr21_+_47545200 BT006913	-18409	+	BC136383 BC136395 BC052248 AF169017 AF289021 AF289022 AF289023 AF289024 NM_006657 NM_206965 TSC_hg19_v1_chr21_-_47575491	11878	-	AL136871 TSC_hg19_v1_chr21_-_47604330	40711	-	TSC_hg19_v1_chr21_-_47604340 BC084577	40741	-	M34570|COL6A2|1292|collagen, type VI, alpha 2##AL360197|COL6A2|1292|collagen, type VI, alpha 2##BT006913|COL6A2|1292|collagen, type VI, alpha 2##BC136383|FTCD|10841|formiminotransferase cyclodeaminase##BC136395|FTCD|10841|formiminotransferase cyclodeaminase##BC052248|FTCD|10841|formiminotransferase cyclodeaminase##AF169017|FTCD|10841|formiminotransferase cyclodeaminase##AF289021|FTCD|10841|formiminotransferase cyclodeaminase##AF289022|FTCD|10841|formiminotransferase cyclodeaminase##AF289023|FTCD|10841|formiminotransferase cyclodeaminase##AF289024|FTCD|10841|formiminotransferase cyclodeaminase##NM_006657|FTCD|10841|formiminotransferase cyclodeaminase##NM_206965|FTCD|10841|formiminotransferase cyclodeaminase##AL136871|C21orf56|84221|chromosome 21 open reading frame 56##BC084577|C21orf56|84221|chromosome 21 open reading frame 56	0.694155	CTCF.p2:-11:0.694
chr2	89039654	89039793	reg1011879.p1	10.689	+	TSC_hg19_v1_chr2_+_88991190 NM_144563 AY050633 BC015529	-48508	+	AF110146 BC126354 BC126356 AK128659 TSC_hg19_v1_chr2_-_88926983 AK315287 AF193339 NM_004836	-112745	-	AK058098 NM_152670 BC029522	-215539	+	BX648045 TSC_hg19_v1_chr2_+_89065391 AL137717 BC031698	25678	+	S49006 TSC_hg19_v1_chr2_-_89165772	125989	-	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	145367	+	NM_144563|RPIA|22934|ribose 5-phosphate isomerase A##AY050633|RPIA|22934|ribose 5-phosphate isomerase A##BC015529|RPIA|22934|ribose 5-phosphate isomerase A##AF110146|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126354|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126356|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK128659|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK315287|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AF193339|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##NM_004836|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK058098|C2orf51|200523|chromosome 2 open reading frame 51##NM_152670|C2orf51|200523|chromosome 2 open reading frame 51##BC029522|C2orf51|200523|chromosome 2 open reading frame 51##BX648045|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AL137717|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##BC031698|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2	0.950793	CTCF.p2:-9:0.951
chr2	68942668	68942807	reg1012104.p1	10.688	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	-69784	+	TSC_hg19_v1_chr2_+_68694716 AK290841 NM_173545 AK308186 BC041144 CU691972	-247973	+	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	-248327	-	NM_001007231 NM_001166277 AK297056 TSC_hg19_v1_chr2_+_68962066 AK310742 AK290396	19336	+	BC032222 NM_001166276 NM_014882 AK311669 TSC_hg19_v1_chr2_+_69002068 BC039591 AK297157 AK298669 D29642	59288	+	BC069080 BC101734 BC105063 AF101441 NM_014482	155838	-	AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1##AK290841|APLF|200558|aprataxin and PNKP like factor##NM_173545|APLF|200558|aprataxin and PNKP like factor##AK308186|APLF|200558|aprataxin and PNKP like factor##BC041144|APLF|200558|aprataxin and PNKP like factor##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48##NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25##AK297056|ARHGAP25|9938|Rho GTPase activating protein 25##AK310742|ARHGAP25|9938|Rho GTPase activating protein 25##AK290396|ARHGAP25|9938|Rho GTPase activating protein 25##BC032222|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166276|ARHGAP25|9938|Rho GTPase activating protein 25##NM_014882|ARHGAP25|9938|Rho GTPase activating protein 25##AK311669|ARHGAP25|9938|Rho GTPase activating protein 25##BC039591|ARHGAP25|9938|Rho GTPase activating protein 25##AK297157|ARHGAP25|9938|Rho GTPase activating protein 25##AK298669|ARHGAP25|9938|Rho GTPase activating protein 25##D29642|ARHGAP25|9938|Rho GTPase activating protein 25##BC069080|BMP10|27302|bone morphogenetic protein 10##BC101734|BMP10|27302|bone morphogenetic protein 10##BC105063|BMP10|27302|bone morphogenetic protein 10##AF101441|BMP10|27302|bone morphogenetic protein 10##NM_014482|BMP10|27302|bone morphogenetic protein 10	0.999427	CTCF.p2:14:0.999
chr22	22415111	22415234	reg1009831.p1	10.687	+	TSC_hg19_v1_chr22_+_22385369 AF026922	-29807	+	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	-77986	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	-78025	-	X02422 TSC_hg19_v1_chr22_+_22550141	134957	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	135006	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	154092	+	AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57	0.968496	CTCF.p2:-14:0.968
chr8	86363901	86364053	reg1009102.p1	10.687	+	AK096880 NM_005181 TSC_hg19_v1_chr8_+_86351055 AK300670 AK300677 AK313254 BC004897 CU678792	-12881	+	BC027890 NM_001128829 NM_001128830 NM_001128831 NM_001738	-73640	-	CU693312 DQ890930 DQ894091 X05014 NM_001164830	-110075	-	NM_000067 AF015039 TSC_hg19_v1_chr8_+_86376232 AK312978 BC011949 J03037 Y00339 M36532 DQ891320 DQ894504 AB591010 CU680124 CR536526 CR541875	12243	+	NM_172239	211748	-	NM_172239	425328	-	AK096880|CA3|761|carbonic anhydrase III, muscle specific##NM_005181|CA3|761|carbonic anhydrase III, muscle specific##AK300670|CA3|761|carbonic anhydrase III, muscle specific##AK300677|CA3|761|carbonic anhydrase III, muscle specific##AK313254|CA3|761|carbonic anhydrase III, muscle specific##BC004897|CA3|761|carbonic anhydrase III, muscle specific##BC027890|CA1|759|carbonic anhydrase I##NM_001128829|CA1|759|carbonic anhydrase I##NM_001128830|CA1|759|carbonic anhydrase I##NM_001128831|CA1|759|carbonic anhydrase I##NM_001738|CA1|759|carbonic anhydrase I##DQ890930|CA1|759|carbonic anhydrase I##DQ894091|CA1|759|carbonic anhydrase I##X05014|CA1|759|carbonic anhydrase I##NM_001164830|CA1|759|carbonic anhydrase I##NM_000067|CA2|760|carbonic anhydrase II##AF015039|CA2|760|carbonic anhydrase II##AK312978|CA2|760|carbonic anhydrase II##BC011949|CA2|760|carbonic anhydrase II##J03037|CA2|760|carbonic anhydrase II##Y00339|CA2|760|carbonic anhydrase II##M36532|CA2|760|carbonic anhydrase II##DQ891320|CA2|760|carbonic anhydrase II##DQ894504|CA2|760|carbonic anhydrase II##CR536526|CA2|760|carbonic anhydrase II##CR541875|CA2|760|carbonic anhydrase II##NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1##NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1	1.234379	CTCF.p2:-14:0.263	CTCF.p2:25:0.971
chr11	72002000	72002102	reg1009422.p1	10.686	+	TSC_hg19_v1_chr11_-_71955221 AK290645 NM_005169	-46816	-	BC041564 TSC_hg19_v1_chr11_-_71955201	-46849	-	Y14385 BC140853 NM_001567	-66199	+	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	143404	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	143525	-	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	143599	-	AK290645|PHOX2A|401|paired-like homeobox 2a##NM_005169|PHOX2A|401|paired-like homeobox 2a##BC041564|PHOX2A|401|paired-like homeobox 2a##Y14385|INPPL1|3636|inositol polyphosphate phosphatase-like 1##BC140853|INPPL1|3636|inositol polyphosphate phosphatase-like 1##NM_001567|INPPL1|3636|inositol polyphosphate phosphatase-like 1##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)	0.480085	CTCF.p2:-13:0.480
chr4	163969747	163969844	reg1008689.p1	10.685	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	-884644	-	AK294459 NM_014247	-3780798	+	AK058100 NM_152543	-4013463	-	TSC_hg19_v1_chr4_-_164088002 AK097352	118197	-	TSC_hg19_v1_chr4_-_164088043 AK308601	118242	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	118283	-	AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.890877	CTCF.p2:0:0.878
chr5	71078849	71078998	reg1010700.p1	10.685	+	NM_004291 BC029882 U16826 CR542216 CU688778 EU831800 EU831877	-63869	+	TSC_hg19_v1_chr5_+_70944968 AK025591	-133936	+	AF261884 TSC_hg19_v1_chr5_+_70883182 BC065027 CU688004	-195708	+	TSC_hg19_v1_chr5_+_71403301 BC017240 NM_005909 BC025240 BC139918 BC150196 BC046114 AK096273 AK308147 BX647077 BC039822 BC108733 BC032516 BC073993 BC056145 BC063669 BC094834 AB463119	324356	+	TSC_hg19_v1_chr5_+_71502701 AK125194	423840	+	CU687962 D87453 TSC_hg19_v1_chr5_-_71616067 BC064902 BC011818 AK299412 AK025417 AK309065	537135	-	NM_004291|CARTPT|9607|CART prepropeptide##BC029882|CARTPT|9607|CART prepropeptide##U16826|CARTPT|9607|CART prepropeptide##CR542216|CARTPT|9607|CART prepropeptide##EU831800|CARTPT|9607|CART prepropeptide##EU831877|CARTPT|9607|CART prepropeptide##AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AF261884|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##BC065027|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##BC017240|MAP1B|4131|microtubule-associated protein 1B##NM_005909|MAP1B|4131|microtubule-associated protein 1B##BC025240|MAP1B|4131|microtubule-associated protein 1B##BC139918|MAP1B|4131|microtubule-associated protein 1B##BC150196|MAP1B|4131|microtubule-associated protein 1B##BC046114|MAP1B|4131|microtubule-associated protein 1B##AK096273|MAP1B|4131|microtubule-associated protein 1B##AK308147|MAP1B|4131|microtubule-associated protein 1B##BX647077|MAP1B|4131|microtubule-associated protein 1B##BC039822|MAP1B|4131|microtubule-associated protein 1B##BC108733|MAP1B|4131|microtubule-associated protein 1B##BC032516|MAP1B|4131|microtubule-associated protein 1B##BC073993|MAP1B|4131|microtubule-associated protein 1B##BC056145|MAP1B|4131|microtubule-associated protein 1B##BC063669|MAP1B|4131|microtubule-associated protein 1B##BC094834|MAP1B|4131|microtubule-associated protein 1B##AK125194|MAP1B|4131|microtubule-associated protein 1B##D87453|MRPS27|23107|mitochondrial ribosomal protein S27##BC064902|MRPS27|23107|mitochondrial ribosomal protein S27##BC011818|MRPS27|23107|mitochondrial ribosomal protein S27##AK299412|MRPS27|23107|mitochondrial ribosomal protein S27##AK025417|MRPS27|23107|mitochondrial ribosomal protein S27##AK309065|MRPS27|23107|mitochondrial ribosomal protein S27	0.993758	CTCF.p2:4:0.994
chr6	139446130	139446264	reg1010973.p1	10.685	+	TSC_hg19_v1_chr6_+_139349935 AK309402 AF116682 BC014953	-96279	+	NM_021243 AF161398 TSC_hg19_v1_chr6_+_139349850	-96360	+	TSC_hg19_v1_chr6_-_139309391 BC012764 NM_001128617 NM_031922	-136787	-	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	10059	+	TSC_hg19_v1_chr6_-_139613136 BX647633 AL834248 AL831988 AK314725 BX647477 BC115383 BC115384 AB085905 NM_153235	166963	-	NM_001168389 NM_001168388	249226	-	AF116682|C6orf115|58527|chromosome 6 open reading frame 115##BC014953|C6orf115|58527|chromosome 6 open reading frame 115##NM_021243|C6orf115|58527|chromosome 6 open reading frame 115##AF161398|C6orf115|58527|chromosome 6 open reading frame 115##BC012764|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_001128617|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_031922|REPS1|85021|RALBP1 associated Eps domain containing 1##BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)##BX647633|TXLNB|167838|taxilin beta##AL834248|TXLNB|167838|taxilin beta##AL831988|TXLNB|167838|taxilin beta##AK314725|TXLNB|167838|taxilin beta##BX647477|TXLNB|167838|taxilin beta##BC115383|TXLNB|167838|taxilin beta##BC115384|TXLNB|167838|taxilin beta##AB085905|TXLNB|167838|taxilin beta##NM_153235|TXLNB|167838|taxilin beta##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	0.18608	
chr9	36729031	36729156	reg1010334.p1	10.685	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-156169	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-327918	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-328196	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	305323	-	TSC_hg19_v1_chr9_+_37079908 AK091718	350813	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	350915	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.999646	CTCF.p2:4:1.000
chr22	25477486	25477627	reg1011177.p1	10.684	+	BC171801 NM_001145206	-53616	+	BC130647 BC130649 CR456388 NM_001001663	-142244	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-275346	+	TSC_hg19_v1_chr22_+_25591072 AK025418	113573	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	118288	+	NM_000496	138055	+	BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AK025418|KIAA1671|85379|KIAA1671##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##NM_000496|CRYBB2|1415|crystallin, beta B2	0.696152	CTCF.p2:-13:0.696
chr1	199521235	199521346	reg1008777.p2	10.683	+	TSC_hg19_v1_chr1_-_198906559 EF413001	-614743	-	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-912960	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-913065	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	475579	+	AK316513 TSC_hg19_v1_chr1_+_200011716	490434	+	NM_001105517	661365	+	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene	0.993433	CTCF.p2:6:0.993
chr6	75976576	75976687	reg1009319.p1	10.683	+	TSC_hg19_v1_chr6_-_75970566 AL162046	-6056	-	AJ420517 TSC_hg19_v1_chr6_-_75965925	-10745	-	TSC_hg19_v1_chr6_-_75953518 NM_001865	-23054	-	TSC_hg19_v1_chr6_-_75994295 CU679225	17609	-	TSC_hg19_v1_chr6_-_75994482 AL832815 BC009006 AK292823	17855	-	TSC_hg19_v1_chr6_-_75994502 AK001718 AK295567 AK293225	17875	-	AL162046|TMEM30A|55754|transmembrane protein 30A##AJ420517|TMEM30A|55754|transmembrane protein 30A##NM_001865|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AL832815|TMEM30A|55754|transmembrane protein 30A##BC009006|TMEM30A|55754|transmembrane protein 30A##AK292823|TMEM30A|55754|transmembrane protein 30A##AK001718|TMEM30A|55754|transmembrane protein 30A##AK295567|TMEM30A|55754|transmembrane protein 30A##AK293225|TMEM30A|55754|transmembrane protein 30A	0.993628	CTCF.p2:-2:0.994
chr1	159102209	159102341	reg1012111.p1	10.682	+	AK292042 BC010940 AF024714 NM_004833	-55675	-	NM_001206567 NM_005531 TSC_hg19_v1_chr1_+_158979716 AF208043 M63838 AB208989 BC017059 AF086545 AK296228 AK307957	-122485	+	NM_152501 NM_198928 NM_198929 NM_198930 AY185344 AY185345 AY185346 AY185347 BC090944 AK308350 BC020822 BC073133 BC114470 BC139741	-200916	+	AK289541 NM_021189 TSC_hg19_v1_chr1_+_159141404 AK308915 NM_001127173 AF363367 AY358332 AF062733 BC033819 AY046418 AF529206 DQ890848 DQ894002	39190	+	AK291593 NM_002036	71527	+	NM_001122951 U01839	72773	+	AK292042|AIM2|9447|absent in melanoma 2##BC010940|AIM2|9447|absent in melanoma 2##AF024714|AIM2|9447|absent in melanoma 2##NM_004833|AIM2|9447|absent in melanoma 2##NM_001206567|IFI16|3428|interferon, gamma-inducible protein 16##NM_005531|IFI16|3428|interferon, gamma-inducible protein 16##AF208043|IFI16|3428|interferon, gamma-inducible protein 16##M63838|IFI16|3428|interferon, gamma-inducible protein 16##AB208989|IFI16|3428|interferon, gamma-inducible protein 16##BC017059|IFI16|3428|interferon, gamma-inducible protein 16##AF086545|IFI16|3428|interferon, gamma-inducible protein 16##AK296228|IFI16|3428|interferon, gamma-inducible protein 16##AK307957|IFI16|3428|interferon, gamma-inducible protein 16##NM_152501|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198928|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198929|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198930|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185344|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185345|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185346|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185347|PYHIN1|149628|pyrin and HIN domain family, member 1##BC090944|PYHIN1|149628|pyrin and HIN domain family, member 1##AK308350|PYHIN1|149628|pyrin and HIN domain family, member 1##BC020822|PYHIN1|149628|pyrin and HIN domain family, member 1##BC073133|PYHIN1|149628|pyrin and HIN domain family, member 1##BC114470|PYHIN1|149628|pyrin and HIN domain family, member 1##BC139741|PYHIN1|149628|pyrin and HIN domain family, member 1##AK289541|CADM3|57863|cell adhesion molecule 3##NM_021189|CADM3|57863|cell adhesion molecule 3##AK308915|CADM3|57863|cell adhesion molecule 3##NM_001127173|CADM3|57863|cell adhesion molecule 3##AF363367|CADM3|57863|cell adhesion molecule 3##AY358332|CADM3|57863|cell adhesion molecule 3##AF062733|CADM3|57863|cell adhesion molecule 3##BC033819|CADM3|57863|cell adhesion molecule 3##AY046418|CADM3|57863|cell adhesion molecule 3##AF529206|CADM3|57863|cell adhesion molecule 3##DQ890848|CADM3|57863|cell adhesion molecule 3##DQ894002|CADM3|57863|cell adhesion molecule 3##AK291593|DARC|2532|Duffy blood group, chemokine receptor##NM_002036|DARC|2532|Duffy blood group, chemokine receptor##NM_001122951|DARC|2532|Duffy blood group, chemokine receptor##U01839|DARC|2532|Duffy blood group, chemokine receptor	0.995626	CTCF.p2:-4:0.996
chr1	212208374	212208505	reg1007470.p1	10.681	+	D86960 NM_014873 TSC_hg19_v1_chr1_-_212004119	-204309	-	BC034621 TSC_hg19_v1_chr1_-_212003681	-204691	-	BT019729 CU688108 AB527570 AY045701 Z29066 AK223353 AK225522 AK303092 TSC_hg19_v1_chr1_-_211848968 U11050 BC043502 BC065932 BC052807 NM_001204182 NM_001204183 NM_002497	-359531	-	AM392654 CU676544 BC030716 TSC_hg19_v1_chr1_-_212208866 BC033918 AK001363 AK022509 BC009918 BC020523 AK297225 AK001598 NM_001199809 NM_001199811 NM_001199812 NM_015434	451	-	NM_016448 AK292343 TSC_hg19_v1_chr1_+_212209090 AK000742 AK303346	575	+	BC033540 TSC_hg19_v1_chr1_+_212209112 AF345896	679	+	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##BC034621|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##BT019729|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AY045701|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##Z29066|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK223353|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK225522|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK303092|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##U11050|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC043502|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC065932|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC052807|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204182|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204183|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_002497|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AM392654|INTS7|25896|integrator complex subunit 7##BC030716|INTS7|25896|integrator complex subunit 7##BC033918|INTS7|25896|integrator complex subunit 7##AK001363|INTS7|25896|integrator complex subunit 7##AK022509|INTS7|25896|integrator complex subunit 7##BC009918|INTS7|25896|integrator complex subunit 7##BC020523|INTS7|25896|integrator complex subunit 7##AK297225|INTS7|25896|integrator complex subunit 7##AK001598|INTS7|25896|integrator complex subunit 7##NM_001199809|INTS7|25896|integrator complex subunit 7##NM_001199811|INTS7|25896|integrator complex subunit 7##NM_001199812|INTS7|25896|integrator complex subunit 7##NM_015434|INTS7|25896|integrator complex subunit 7##NM_016448|DTL|51514|denticleless homolog (Drosophila)##AK292343|DTL|51514|denticleless homolog (Drosophila)##AK000742|DTL|51514|denticleless homolog (Drosophila)##AK303346|DTL|51514|denticleless homolog (Drosophila)##BC033540|DTL|51514|denticleless homolog (Drosophila)##AF345896|DTL|51514|denticleless homolog (Drosophila)	0.521852	CTCF.p2:-5:0.522
chr7	69397122	69397236	reg1007854.p1	10.681	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-332591	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-332850	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-333343	+	TSC_hg19_v1_chr7_+_70231164 AK296981	834026	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1200609	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2404599	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.073866	
chr6	55751133	55751242	reg1005723.p2	10.680	+	AK291559 TSC_hg19_v1_chr6_-_55740389	-10798	-	TSC_hg19_v1_chr6_-_55740358 M60314 BC027958 NM_021073	-10821	-	CU692876 AL137605 AK293856 BC024194 AK055075 AK297191 AK294210 AK127587 NM_001042406 NM_019036	-307255	-	TSC_hg19_v1_chr6_-_56112233 BC126108 BC143862 BC143863 BC143864 BC143865 AK126586	361049	-	TSC_hg19_v1_chr6_-_56112350 BC045597 AF414088 AL136624 AK313398 NM_030820	361174	-	AF330693 TSC_hg19_v1_chr6_-_56258945	507737	-	AK291559|BMP5|653|bone morphogenetic protein 5##M60314|BMP5|653|bone morphogenetic protein 5##BC027958|BMP5|653|bone morphogenetic protein 5##NM_021073|BMP5|653|bone morphogenetic protein 5##AL137605|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK293856|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##BC024194|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK055075|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK297191|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK294210|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK127587|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_001042406|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_019036|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##BC126108|COL21A1|81578|collagen, type XXI, alpha 1##BC143862|COL21A1|81578|collagen, type XXI, alpha 1##BC143863|COL21A1|81578|collagen, type XXI, alpha 1##BC143864|COL21A1|81578|collagen, type XXI, alpha 1##BC143865|COL21A1|81578|collagen, type XXI, alpha 1##AK126586|COL21A1|81578|collagen, type XXI, alpha 1##BC045597|COL21A1|81578|collagen, type XXI, alpha 1##AF414088|COL21A1|81578|collagen, type XXI, alpha 1##AL136624|COL21A1|81578|collagen, type XXI, alpha 1##AK313398|COL21A1|81578|collagen, type XXI, alpha 1##NM_030820|COL21A1|81578|collagen, type XXI, alpha 1##AF330693|COL21A1|81578|collagen, type XXI, alpha 1	0.610761	CTCF.p2:0:0.611
chr8	98905554	98905666	reg1009167.p2	10.680	+	TSC_hg19_v1_chr8_+_98881340 NM_002380 NM_030583 BC010444 AY358895 AK075489 AL833931 AL137638	-24281	+	TSC_hg19_v1_chr8_+_98788065 BC031021 AK075326 BC014129 AL136942 AK311377 AX810698 AB528832 AF317417 AM392726 AM393691	-117485	+	AY057051 AY261384 NM_018407 AF527412 TSC_hg19_v1_chr8_+_98787993	-117709	+	AB591031 X79238 BC032700 TSC_hg19_v1_chr8_-_99057620	151998	-	L05095 TSC_hg19_v1_chr8_-_99057755	152143	-	BC095426 TSC_hg19_v1_chr8_-_99057774 AK312102 D28438 AK308890 NM_000989	152186	-	NM_002380|MATN2|4147|matrilin 2##NM_030583|MATN2|4147|matrilin 2##BC010444|MATN2|4147|matrilin 2##AY358895|MATN2|4147|matrilin 2##AK075489|MATN2|4147|matrilin 2##AL833931|MATN2|4147|matrilin 2##AL137638|MATN2|4147|matrilin 2##BC031021|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK075326|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##BC014129|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AL136942|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK311377|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF317417|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AM392726|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AM393691|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AY057051|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AY261384|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##NM_018407|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF527412|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##X79238|RPL30|6156|ribosomal protein L30##BC032700|RPL30|6156|ribosomal protein L30##L05095|RPL30|6156|ribosomal protein L30##BC095426|RPL30|6156|ribosomal protein L30##AK312102|RPL30|6156|ribosomal protein L30##D28438|RPL30|6156|ribosomal protein L30##AK308890|RPL30|6156|ribosomal protein L30##NM_000989|RPL30|6156|ribosomal protein L30	0.971128	CTCF.p2:-4:0.971
chr3	81959531	81959667	reg1009447.p1	10.679	+	TSC_hg19_v1_chr3_-_81810971 NM_000158	-148657	-	TSC_hg19_v1_chr3_-_81810866 AB209731 BC012098	-148751	-	TSC_hg19_v1_chr3_-_81810802 AK297939	-148794	-	BC031255 TSC_hg19_v1_chr3_+_82035308	75703	+	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	3048530	+	AF538973 NM_153184	3816032	+	NM_000158|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB209731|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##BC012098|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2	0.993986	CTCF.p2:0:0.994
chr7	119575613	119575730	reg1009105.p1	10.679	+	NM_019644 AK302407	-1710937	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-1751500	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-2062128	-	AK307139 AB028967 NM_012281	338033	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	922349	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	922489	-	NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12	0.996734	CTCF.p2:0:0.997
chrX	122556881	122556981	reg1008947.p1	10.679	+	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	-238691	+	TSC_hg19_v1_chrX_+_120181464 BC050732 NM_012084 AK313356	-2375491	+	BC029540 NM_001080141 NM_001080146	-2437294	-	TSC_hg19_v1_chrX_-_122866885 AK001758	309952	-	TSC_hg19_v1_chrX_-_122866897 NM_001081550	309966	-	TSC_hg19_v1_chrX_+_122993844 AK313883 NM_001204401 NM_001167 AK309704 U32974 BC032729	437011	+	NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC050732|GLUD2|2747|glutamate dehydrogenase 2##NM_012084|GLUD2|2747|glutamate dehydrogenase 2##AK313356|GLUD2|2747|glutamate dehydrogenase 2##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##AK001758|THOC2|57187|THO complex 2##NM_001081550|THOC2|57187|THO complex 2##AK313883|XIAP|331|X-linked inhibitor of apoptosis##NM_001204401|XIAP|331|X-linked inhibitor of apoptosis##NM_001167|XIAP|331|X-linked inhibitor of apoptosis##AK309704|XIAP|331|X-linked inhibitor of apoptosis##U32974|XIAP|331|X-linked inhibitor of apoptosis##BC032729|XIAP|331|X-linked inhibitor of apoptosis	0.028574	
chr13	25688436	25688558	reg1009347.p1	10.678	+	NM_030979 AL136900 AK313336 BC045608 BC027617 AF132026 DQ892103 DQ895297	-18192	+	TSC_hg19_v1_chr13_-_25497054 NM_018451	-191428	-	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	-191528	-	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	57163	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	57320	-	AK055049 BC041392 TSC_hg19_v1_chr13_-_25746427	57868	-	NM_030979|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AL136900|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK313336|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC045608|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC027617|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AF132026|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ892103|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ895297|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##NM_018451|CENPJ|55835|centromere protein J##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A##AK055049|FAM123A|219287|family with sequence similarity 123A##BC041392|FAM123A|219287|family with sequence similarity 123A	0.996726	CTCF.p2:5:0.997
chr5	179898113	179898236	reg1010184.p1	10.678	+	AB016789 NM_005110 BC000012 TSC_hg19_v1_chr5_-_179780333 AK022507 AK314551	-117849	-	TSC_hg19_v1_chr5_-_179719061 NM_001135044 NM_002752 NM_139068 NM_139069 NM_139070	-179098	-	TSC_hg19_v1_chr5_-_179718968 AK289638	-179207	-	TSC_hg19_v1_chr5_+_179921385 NM_015455	23219	+	TSC_hg19_v1_chr5_+_179921452 AB033020 BC152469	23284	+	AB590701 AF313458 BC029176 AF086152 AF436839 AY040564 BC072673 NM_052863 AY359064	120328	-	AB016789|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##NM_005110|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##BC000012|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##AK022507|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##AK314551|GFPT2|9945|glutamine-fructose-6-phosphate transaminase 2##NM_001135044|MAPK9|5601|mitogen-activated protein kinase 9##NM_002752|MAPK9|5601|mitogen-activated protein kinase 9##NM_139068|MAPK9|5601|mitogen-activated protein kinase 9##NM_139069|MAPK9|5601|mitogen-activated protein kinase 9##NM_139070|MAPK9|5601|mitogen-activated protein kinase 9##AK289638|MAPK9|5601|mitogen-activated protein kinase 9##NM_015455|CNOT6|57472|CCR4-NOT transcription complex, subunit 6##AB033020|CNOT6|57472|CCR4-NOT transcription complex, subunit 6##BC152469|CNOT6|57472|CCR4-NOT transcription complex, subunit 6##AF313458|SCGB3A1|92304|secretoglobin, family 3A, member 1##BC029176|SCGB3A1|92304|secretoglobin, family 3A, member 1##AF086152|SCGB3A1|92304|secretoglobin, family 3A, member 1##AF436839|SCGB3A1|92304|secretoglobin, family 3A, member 1##AY040564|SCGB3A1|92304|secretoglobin, family 3A, member 1##BC072673|SCGB3A1|92304|secretoglobin, family 3A, member 1##NM_052863|SCGB3A1|92304|secretoglobin, family 3A, member 1##AY359064|SCGB3A1|92304|secretoglobin, family 3A, member 1	0.998928	CTCF.p2:-14:0.999
chr2	46005874	46005973	reg1008990.p2	10.677	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-126849	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-167516	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-210795	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	518668	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	519052	+	NM_001145051	700780	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.998516	CTCF.p2:2:0.999
chr5	140797111	140797227	reg1009760.p1	10.677	+	TSC_hg19_v1_chr5_+_140792580 BC014509 BC093873 BC093875 AF152319 AF152503 NM_018913 NM_032090	-4545	+	AF152335 AF152522 NM_018926 NM_032100	-9400	+	TSC_hg19_v1_chr5_+_140782367 BC132769 AF152329 AF152516 NM_018921 NM_032089	-14726	+	TSC_hg19_v1_chr5_+_140797217 NM_032101	47	+	TSC_hg19_v1_chr5_+_140797246 NM_018927	82	+	TSC_hg19_v1_chr5_+_140797279 AF152336 AF152523	179	+	BC014509|PCDHGA10|56106|protocadherin gamma subfamily A, 10##BC093873|PCDHGA10|56106|protocadherin gamma subfamily A, 10##BC093875|PCDHGA10|56106|protocadherin gamma subfamily A, 10##AF152319|PCDHGA10|56106|protocadherin gamma subfamily A, 10##AF152503|PCDHGA10|56106|protocadherin gamma subfamily A, 10##NM_018913|PCDHGA10|56106|protocadherin gamma subfamily A, 10##NM_032090|PCDHGA10|56106|protocadherin gamma subfamily A, 10##AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6##AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6##NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6##NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6##BC132769|PCDHGA9|56107|protocadherin gamma subfamily A, 9##AF152329|PCDHGA9|56107|protocadherin gamma subfamily A, 9##AF152516|PCDHGA9|56107|protocadherin gamma subfamily A, 9##NM_018921|PCDHGA9|56107|protocadherin gamma subfamily A, 9##NM_032089|PCDHGA9|56107|protocadherin gamma subfamily A, 9##NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7##NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7##AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7##AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7	0.0	
chrX	8706766	8706898	reg1009482.p1	10.677	+	TSC_hg19_v1_chrX_-_8700193 BC137426 BC137427 M97252 NM_000216 S60085	-6625	-	X60299 TSC_hg19_v1_chrX_-_8700155	-6689	-	AF167078 AF167080 NM_001001888	-273962	+	BC113449 BC143805 NM_001171186 BC112022 AF494343 NM_174951	62568	-	BC120955 BC120956 NM_205849	294270	-	TSC_hg19_v1_chrX_+_9431357 AK289409 NM_001139466 NM_001139467 NM_001139468 AK290962 BC032708	724515	+	BC137426|KAL1|3730|Kallmann syndrome 1 sequence##BC137427|KAL1|3730|Kallmann syndrome 1 sequence##M97252|KAL1|3730|Kallmann syndrome 1 sequence##NM_000216|KAL1|3730|Kallmann syndrome 1 sequence##S60085|KAL1|3730|Kallmann syndrome 1 sequence##X60299|KAL1|3730|Kallmann syndrome 1 sequence##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167080|VCX3B|425054|variable charge, X-linked 3B##NM_001001888|VCX3B|425054|variable charge, X-linked 3B##BC113449|FAM9A|171482|family with sequence similarity 9, member A##BC143805|FAM9A|171482|family with sequence similarity 9, member A##NM_001171186|FAM9A|171482|family with sequence similarity 9, member A##BC112022|FAM9A|171482|family with sequence similarity 9, member A##AF494343|FAM9A|171482|family with sequence similarity 9, member A##NM_174951|FAM9A|171482|family with sequence similarity 9, member A##BC120955|FAM9B|171483|family with sequence similarity 9, member B##BC120956|FAM9B|171483|family with sequence similarity 9, member B##NM_205849|FAM9B|171483|family with sequence similarity 9, member B##AK289409|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139466|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139467|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139468|TBL1X|6907|transducin (beta)-like 1X-linked##AK290962|TBL1X|6907|transducin (beta)-like 1X-linked##BC032708|TBL1X|6907|transducin (beta)-like 1X-linked	0.142531	
chr1	212185422	212185543	reg1010923.p1	10.676	+	D86960 NM_014873 TSC_hg19_v1_chr1_-_212004119	-181352	-	BC034621 TSC_hg19_v1_chr1_-_212003681	-181734	-	BT019729 CU688108 AB527570 AY045701 Z29066 AK223353 AK225522 AK303092 TSC_hg19_v1_chr1_-_211848968 U11050 BC043502 BC065932 BC052807 NM_001204182 NM_001204183 NM_002497	-336574	-	AM392654 CU676544 BC030716 TSC_hg19_v1_chr1_-_212208866 BC033918 AK001363 AK022509 BC009918 BC020523 AK297225 AK001598 NM_001199809 NM_001199811 NM_001199812 NM_015434	23408	-	NM_016448 AK292343 TSC_hg19_v1_chr1_+_212209090 AK000742 AK303346	23532	+	BC033540 TSC_hg19_v1_chr1_+_212209112 AF345896	23636	+	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##BC034621|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##BT019729|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AY045701|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##Z29066|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK223353|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK225522|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK303092|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##U11050|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC043502|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC065932|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC052807|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204182|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204183|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_002497|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AM392654|INTS7|25896|integrator complex subunit 7##BC030716|INTS7|25896|integrator complex subunit 7##BC033918|INTS7|25896|integrator complex subunit 7##AK001363|INTS7|25896|integrator complex subunit 7##AK022509|INTS7|25896|integrator complex subunit 7##BC009918|INTS7|25896|integrator complex subunit 7##BC020523|INTS7|25896|integrator complex subunit 7##AK297225|INTS7|25896|integrator complex subunit 7##AK001598|INTS7|25896|integrator complex subunit 7##NM_001199809|INTS7|25896|integrator complex subunit 7##NM_001199811|INTS7|25896|integrator complex subunit 7##NM_001199812|INTS7|25896|integrator complex subunit 7##NM_015434|INTS7|25896|integrator complex subunit 7##NM_016448|DTL|51514|denticleless homolog (Drosophila)##AK292343|DTL|51514|denticleless homolog (Drosophila)##AK000742|DTL|51514|denticleless homolog (Drosophila)##AK303346|DTL|51514|denticleless homolog (Drosophila)##BC033540|DTL|51514|denticleless homolog (Drosophila)##AF345896|DTL|51514|denticleless homolog (Drosophila)	0.929897	CTCF.p2:1:0.930
chr21	26412201	26412336	reg1009129.p2	10.676	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-611200	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-4041495	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-4041578	+	TSC_hg19_v1_chr21_+_26934442 AF402776	522204	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	567547	-	NM_021219 TSC_hg19_v1_chr21_+_27011719	599385	+	AK124194|FLJ42200|400860|FLJ42200 protein##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##NM_021219|JAM2|58494|junctional adhesion molecule 2	0.88551	CTCF.p2:-7:0.886
chr4	14751674	14751811	reg1009334.p1	10.676	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-1122425	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-1202328	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-1205667	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	251967	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	252253	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	252555	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.129498	
chr14	93500846	93500972	reg1008253.p1	10.675	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-111312	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	-111465	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-240223	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	80682	-	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	81305	-	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	150291	-	AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1	0.979814	CTCF.p2:1:0.980
chr3	149945673	149945792	reg1009170.p1	10.673	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-256652	+	TSC_hg19_v1_chr3_-_149688960 BC043646	-256803	-	TSC_hg19_v1_chr3_-_149688683 AB464068 AF228738 EU832616 EU832688 AK311782 L10678 BC002964 BC095444 AK307227 AK311780 BC018049 AK297915 NM_002628 NM_053024	-257036	-	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	180340	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	181031	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	318238	-	BC012363|LOC646903|646903|uncharacterized LOC646903##BC043646|PFN2|5217|profilin 2##AF228738|PFN2|5217|profilin 2##EU832616|PFN2|5217|profilin 2##EU832688|PFN2|5217|profilin 2##AK311782|PFN2|5217|profilin 2##L10678|PFN2|5217|profilin 2##BC002964|PFN2|5217|profilin 2##BC095444|PFN2|5217|profilin 2##AK307227|PFN2|5217|profilin 2##AK311780|PFN2|5217|profilin 2##BC018049|PFN2|5217|profilin 2##AK297915|PFN2|5217|profilin 2##NM_002628|PFN2|5217|profilin 2##NM_053024|PFN2|5217|profilin 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.879085	CTCF.p2:5:0.879
chrX	153316797	153316886	reg1007983.p2	10.673	+	TSC_hg19_v1_chrX_-_153285340 BC054000 L76191 NM_001025242 NM_001025243 NM_001569	-31504	-	AF346607 DQ054788 AM392624 AM393211 EU831427 EU831520 AB463802 TSC_hg19_v1_chrX_-_153285300 BC014963	-31546	-	NM_003492	-78851	+	BC062546 TSC_hg19_v1_chrX_-_153363132 AF158180 AY541280	46219	-	TSC_hg19_v1_chrX_-_153363173 AK289444	46317	-	TSC_hg19_v1_chrX_-_153363175 BX538060 AB209464 GQ203293 GQ203294 GQ203295 GQ896382 GU479943 HM020402 HM156732 HM156733 HQ141378 HQ154629 NM_001110792 NM_004992	46339	-	BC054000|IRAK1|3654|interleukin-1 receptor-associated kinase 1##L76191|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_001025242|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_001025243|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_001569|IRAK1|3654|interleukin-1 receptor-associated kinase 1##AF346607|IRAK1|3654|interleukin-1 receptor-associated kinase 1##DQ054788|IRAK1|3654|interleukin-1 receptor-associated kinase 1##AM392624|IRAK1|3654|interleukin-1 receptor-associated kinase 1##AM393211|IRAK1|3654|interleukin-1 receptor-associated kinase 1##EU831427|IRAK1|3654|interleukin-1 receptor-associated kinase 1##EU831520|IRAK1|3654|interleukin-1 receptor-associated kinase 1##BC014963|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_003492|TMEM187|8269|transmembrane protein 187##BC062546|LOC728653|728653|uncharacterized LOC728653##AF158180|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##AY541280|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##AK289444|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##BX538060|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##AB209464|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GQ203293|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GQ203294|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GQ203295|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GQ896382|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GU479943|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HM020402|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HM156732|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HM156733|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HQ141378|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HQ154629|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##NM_001110792|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##NM_004992|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)	0.250348	CTCF.p2:9:0.250
chr5	68303728	68303853	reg1011645.p1	10.672	+	AK094785 NM_001242466 AK294919	-715338	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-717244	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-719496	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	86013	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	86092	+	AK292925 TSC_hg19_v1_chr5_+_68389913	86123	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.970886	CTCF.p2:0:0.971
chr6	153219072	153219191	reg1011951.p1	10.672	+	AK313950 BC009794 NM_003381 NM_194435 AK291959 M36634	-147145	+	NM_025107 AF527367 AK024922 BC128463 BC128464 GU997693 AK021612 BC022556 AL834500 CU692694	-200026	+	AF495910 NM_182961	-260598	-	AY079515 DQ891922 DQ895106 BC018905 AF129535 TSC_hg19_v1_chr6_-_153304175 AK026197 AK314456 NM_012177	85016	-	AJ420499 TSC_hg19_v1_chr6_-_153304715 AK055221 NM_001142522	85533	-	TSC_hg19_v1_chr6_-_153323825 AK027684 CU676987 CU680090 AK001037 AK225321 AK225970 AK290662 BC014428	104681	-	AK313950|VIP|7432|vasoactive intestinal peptide##BC009794|VIP|7432|vasoactive intestinal peptide##NM_003381|VIP|7432|vasoactive intestinal peptide##NM_194435|VIP|7432|vasoactive intestinal peptide##AK291959|VIP|7432|vasoactive intestinal peptide##M36634|VIP|7432|vasoactive intestinal peptide##NM_025107|MYCT1|80177|myc target 1##AF527367|MYCT1|80177|myc target 1##AK024922|MYCT1|80177|myc target 1##BC128463|MYCT1|80177|myc target 1##BC128464|MYCT1|80177|myc target 1##GU997693|MYCT1|80177|myc target 1##AK021612|MYCT1|80177|myc target 1##BC022556|MYCT1|80177|myc target 1##AL834500|MYCT1|80177|myc target 1##AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AY079515|FBXO5|26271|F-box protein 5##DQ891922|FBXO5|26271|F-box protein 5##DQ895106|FBXO5|26271|F-box protein 5##BC018905|FBXO5|26271|F-box protein 5##AF129535|FBXO5|26271|F-box protein 5##AK026197|FBXO5|26271|F-box protein 5##AK314456|FBXO5|26271|F-box protein 5##NM_012177|FBXO5|26271|F-box protein 5##AJ420499|FBXO5|26271|F-box protein 5##AK055221|FBXO5|26271|F-box protein 5##NM_001142522|FBXO5|26271|F-box protein 5##AK027684|MTRF1L|54516|mitochondrial translational release factor 1-like##AK225321|MTRF1L|54516|mitochondrial translational release factor 1-like##AK225970|MTRF1L|54516|mitochondrial translational release factor 1-like##AK290662|MTRF1L|54516|mitochondrial translational release factor 1-like##BC014428|MTRF1L|54516|mitochondrial translational release factor 1-like	0.96599	CTCF.p2:-3:0.966
chr10	6487787	6487881	reg1006547.p1	10.671	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-242958	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-300922	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-300950	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	134427	-	TSC_hg19_v1_chr10_+_6622460 AY007155	134646	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	963416	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.166889	
chr8	53025080	53025185	reg1008711.p1	10.671	+	AK299452 TSC_hg19_v1_chr8_+_52812239	-212909	+	TSC_hg19_v1_chr8_-_52811724 NM_052937	-213405	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	-213530	-	BC026316 AB011107 AK311188 BC031075 NM_014682 BC025662	297188	-	BC130641 BC130643 BC144534 AY358213 NM_207413	452861	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	601854	-	NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC130641|FAM150A|389658|family with sequence similarity 150, member A##BC130643|FAM150A|389658|family with sequence similarity 150, member A##BC144534|FAM150A|389658|family with sequence similarity 150, member A##AY358213|FAM150A|389658|family with sequence similarity 150, member A##NM_207413|FAM150A|389658|family with sequence similarity 150, member A##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1	0.63593	CTCF.p2:1:0.636
chr12	89387549	89387677	reg1011717.p1	10.670	+	BC074725 AK293002 AF119835 AF400437 BC126166 BC143899 BC069797 BC069733 BC069783 TSC_hg19_v1_chr12_-_88974249 AF400436 M59964 AK290319 NM_000899 NM_003994	-413441	-	TSC_hg19_v1_chr12_+_88536083 AK290436 AK302755 AK310375 AK310393 NM_181783 CR749309 BX538169 CR749244 CR933632 AJ697717 BC117177 BC117175	-851465	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	-851744	-	TSC_hg19_v1_chr12_+_89744716 AK124265	357139	+	TSC_hg19_v1_chr12_-_89745782 AB451265 AB451393 BT006895 CU678402 AB463588 DQ892490 DQ895701	358172	-	TSC_hg19_v1_chr12_-_89746181 BC003143 BC003562 AB013382 AB013602 X93920 AK222882	358478	-	BC074725|KITLG|4254|KIT ligand##AK293002|KITLG|4254|KIT ligand##AF119835|KITLG|4254|KIT ligand##AF400437|KITLG|4254|KIT ligand##BC126166|KITLG|4254|KIT ligand##BC143899|KITLG|4254|KIT ligand##BC069797|KITLG|4254|KIT ligand##BC069733|KITLG|4254|KIT ligand##BC069783|KITLG|4254|KIT ligand##AF400436|KITLG|4254|KIT ligand##M59964|KITLG|4254|KIT ligand##AK290319|KITLG|4254|KIT ligand##NM_000899|KITLG|4254|KIT ligand##NM_003994|KITLG|4254|KIT ligand##AK290436|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK302755|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310375|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310393|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##NM_181783|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749309|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BX538169|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749244|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR933632|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AJ697717|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117177|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117175|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa##AK124265|LOC100131490|100131490|uncharacterized LOC100131490##AB451265|DUSP6|1848|dual specificity phosphatase 6##AB451393|DUSP6|1848|dual specificity phosphatase 6##BT006895|DUSP6|1848|dual specificity phosphatase 6##DQ892490|DUSP6|1848|dual specificity phosphatase 6##DQ895701|DUSP6|1848|dual specificity phosphatase 6##BC003143|DUSP6|1848|dual specificity phosphatase 6##BC003562|DUSP6|1848|dual specificity phosphatase 6##AB013382|DUSP6|1848|dual specificity phosphatase 6##AB013602|DUSP6|1848|dual specificity phosphatase 6##X93920|DUSP6|1848|dual specificity phosphatase 6##AK222882|DUSP6|1848|dual specificity phosphatase 6	0.0	
chr18	29738101	29738250	reg1011545.p1	10.670	+	NM_001191324 NM_198128 TSC_hg19_v1_chr18_+_29672650 AK023579 AB528421 DQ890744 DQ893914 CU676180 BT006878 CR457150	-65522	+	TSC_hg19_v1_chr18_+_29671959 AK315761 AF162680 BC018107	-66125	+	NM_016271 TSC_hg19_v1_chr18_+_29671843	-66339	+	AY695931 NM_005925 X81333 TSC_hg19_v1_chr18_+_29770001 BC136559 BC144244	31822	+	TSC_hg19_v1_chr18_-_29993196 D28353	255020	-	AL834491 BC121067 BC121068 AK025263 NM_001242409 NM_022751	312245	-	NM_001191324|RNF138|51444|ring finger protein 138##NM_198128|RNF138|51444|ring finger protein 138##AK023579|RNF138|51444|ring finger protein 138##DQ890744|RNF138|51444|ring finger protein 138##DQ893914|RNF138|51444|ring finger protein 138##BT006878|RNF138|51444|ring finger protein 138##CR457150|RNF138|51444|ring finger protein 138##AK315761|RNF138|51444|ring finger protein 138##AF162680|RNF138|51444|ring finger protein 138##BC018107|RNF138|51444|ring finger protein 138##NM_016271|RNF138|51444|ring finger protein 138##AY695931|MEP1B|4225|meprin A, beta##NM_005925|MEP1B|4225|meprin A, beta##X81333|MEP1B|4225|meprin A, beta##BC136559|MEP1B|4225|meprin A, beta##BC144244|MEP1B|4225|meprin A, beta##AL834491|FAM59A|64762|family with sequence similarity 59, member A##BC121067|FAM59A|64762|family with sequence similarity 59, member A##BC121068|FAM59A|64762|family with sequence similarity 59, member A##AK025263|FAM59A|64762|family with sequence similarity 59, member A##NM_001242409|FAM59A|64762|family with sequence similarity 59, member A##NM_022751|FAM59A|64762|family with sequence similarity 59, member A	0.996142	CTCF.p2:-4:0.996
chr7	44059919	44060032	reg1010945.p1	10.670	+	TSC_hg19_v1_chr7_-_44058749 BC062722 BX537878 BX538054 BC017341 BC017250 BC105584 AK296066	-1198	-	AF412027 NM_175064	-19488	+	TSC_hg19_v1_chr7_+_43966046 NM_015983 BC004104 AK001446 AF125045 AB528947 CU678576	-93906	+	TSC_hg19_v1_chr7_+_44078680 BC081571 BC024303	18774	+	NM_001014436 NM_001122956 NM_014063 TSC_hg19_v1_chr7_+_44084271 AK293279 AK293698	24284	+	TSC_hg19_v1_chr7_+_44084300 AF077353 AK293151 AK296778 AK298102 AK302037 AF218020	24320	+	BC062722|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BX537878|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BX538054|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC017341|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC017250|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC105584|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##AK296066|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##AF412027|SPDYE1|285955|speedy homolog E1 (Xenopus laevis)##NM_175064|SPDYE1|285955|speedy homolog E1 (Xenopus laevis)##NM_015983|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##BC004104|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##AK001446|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##AF125045|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##BC081571|FLJ35390|255031|uncharacterized LOC255031##BC024303|FLJ35390|255031|uncharacterized LOC255031##NM_001014436|DBNL|28988|drebrin-like##NM_001122956|DBNL|28988|drebrin-like##NM_014063|DBNL|28988|drebrin-like##AK293279|DBNL|28988|drebrin-like##AK293698|DBNL|28988|drebrin-like##AF077353|DBNL|28988|drebrin-like##AK293151|DBNL|28988|drebrin-like##AK296778|DBNL|28988|drebrin-like##AK298102|DBNL|28988|drebrin-like##AK302037|DBNL|28988|drebrin-like##AF218020|DBNL|28988|drebrin-like	0.830069	CTCF.p2:-7:0.830
chr17	45018285	45018431	reg1012239.p1	10.669	+	TSC_hg19_v1_chr17_+_45000525 AK303650 AK290890 BC009710 AF229796 BC034762 CU679451 AF007548 DQ891461 DQ894638	-17813	+	TSC_hg19_v1_chr17_+_45000492 NM_001012511 NM_004287 NM_054022	-17871	+	AY358217 AK127615 AB063483 NM_003396 BC064534 AB590853	-89384	+	BC108690 BC033942 NM_203400	38242	-	CU679998 AB384784 DQ892780 DQ896027 BC011656 DQ786193 TSC_hg19_v1_chr17_-_45266619 U00001 AK296881 S78234	248220	-	TSC_hg19_v1_chr17_-_45266641 AK299342	248281	-	AK290890|GOSR2|9570|golgi SNAP receptor complex member 2##BC009710|GOSR2|9570|golgi SNAP receptor complex member 2##AF229796|GOSR2|9570|golgi SNAP receptor complex member 2##BC034762|GOSR2|9570|golgi SNAP receptor complex member 2##AF007548|GOSR2|9570|golgi SNAP receptor complex member 2##DQ891461|GOSR2|9570|golgi SNAP receptor complex member 2##DQ894638|GOSR2|9570|golgi SNAP receptor complex member 2##NM_001012511|GOSR2|9570|golgi SNAP receptor complex member 2##NM_004287|GOSR2|9570|golgi SNAP receptor complex member 2##NM_054022|GOSR2|9570|golgi SNAP receptor complex member 2##AY358217|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AK127615|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AB063483|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_003396|WNT9B|7484|wingless-type MMTV integration site family, member 9B##BC064534|WNT9B|7484|wingless-type MMTV integration site family, member 9B##BC108690|RPRML|388394|reprimo-like##BC033942|RPRML|388394|reprimo-like##NM_203400|RPRML|388394|reprimo-like##DQ892780|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##DQ896027|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##BC011656|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##DQ786193|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##U00001|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##AK296881|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##S78234|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##AK299342|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)	0.969432	CTCF.p2:12:0.969
chr3	123208372	123208488	reg1009842.p1	10.669	+	AB527359 NM_183357	-41039	-	AK303070 NM_001199642	-73242	-	NM_012430 TSC_hg19_v1_chr3_+_122920787 AK315771 AF100749	-287640	+	TSC_hg19_v1_chr3_-_123303927 CU687458 AK289983 NM_198402 AK125375 BC060839 AY191814 BC049369	95503	-	BC113458 BC113456 BC100761 BC100762 BC100763 AF096773 AF096774 AF096775 AK314412 TSC_hg19_v1_chr3_-_123339352 BC017811 BC107783 Y09530 BC064420 AK314443	130854	-	TSC_hg19_v1_chr3_-_123339426 NM_053031 NM_053032	131046	-	NM_183357|ADCY5|111|adenylate cyclase 5##AK303070|ADCY5|111|adenylate cyclase 5##NM_001199642|ADCY5|111|adenylate cyclase 5##NM_012430|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK315771|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AF100749|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK289983|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##NM_198402|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC060839|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AY191814|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC049369|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC113458|MYLK|4638|myosin light chain kinase##BC113456|MYLK|4638|myosin light chain kinase##BC100761|MYLK|4638|myosin light chain kinase##BC100762|MYLK|4638|myosin light chain kinase##BC100763|MYLK|4638|myosin light chain kinase##AF096773|MYLK|4638|myosin light chain kinase##AF096774|MYLK|4638|myosin light chain kinase##AF096775|MYLK|4638|myosin light chain kinase##AK314412|MYLK|4638|myosin light chain kinase##BC017811|MYLK|4638|myosin light chain kinase##BC107783|MYLK|4638|myosin light chain kinase##Y09530|MYLK|4638|myosin light chain kinase##BC064420|MYLK|4638|myosin light chain kinase##AK314443|MYLK|4638|myosin light chain kinase##NM_053031|MYLK|4638|myosin light chain kinase##NM_053032|MYLK|4638|myosin light chain kinase	0.539844	CTCF.p2:6:0.540
chr5	145061304	145061410	reg1011434.p1	10.669	+	AK292477 CR749266 NM_020768	-1510942	+	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	-1511111	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	-1511181	-	TSC_hg19_v1_chr5_-_145214906 BC028175 AK095695 AK125215 NM_182960 NM_205846 BC012033 NM_138492	153531	-	NM_001080516	191173	-	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	254814	+	AK292477|KCTD16|57528|potassium channel tetramerisation domain containing 16##CR749266|KCTD16|57528|potassium channel tetramerisation domain containing 16##NM_020768|KCTD16|57528|potassium channel tetramerisation domain containing 16##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC028175|PRELID2|153768|PRELI domain containing 2##AK095695|PRELID2|153768|PRELI domain containing 2##AK125215|PRELID2|153768|PRELI domain containing 2##NM_182960|PRELID2|153768|PRELI domain containing 2##NM_205846|PRELID2|153768|PRELI domain containing 2##BC012033|PRELID2|153768|PRELI domain containing 2##NM_138492|PRELID2|153768|PRELI domain containing 2##NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2	0.987139	CTCF.p2:0:0.987
chr9	117197186	117197312	reg1011436.p1	10.669	+	AY703039 AK126136 TSC_hg19_v1_chr9_-_117160753	-36498	-	AY703040 BC055285 NM_030767	-40565	-	AY703041 AY703042 AK131082 AK160382 TSC_hg19_v1_chr9_-_117150263 AB075848	-46959	-	AL110228 NM_001083885	68224	-	BC142684 TSC_hg19_v1_chr9_-_117267731 AK056190 BC142614 NM_001173425 NM_015404	70481	-	NM_004888 TSC_hg19_v1_chr9_+_117350048 BC003564 AF038954 BC008452	152789	+	AY703039|AKNA|80709|AT-hook transcription factor##AK126136|AKNA|80709|AT-hook transcription factor##AY703040|AKNA|80709|AT-hook transcription factor##BC055285|AKNA|80709|AT-hook transcription factor##NM_030767|AKNA|80709|AT-hook transcription factor##AY703041|AKNA|80709|AT-hook transcription factor##AY703042|AKNA|80709|AT-hook transcription factor##AK131082|AKNA|80709|AT-hook transcription factor##AK160382|AKNA|80709|AT-hook transcription factor##AB075848|AKNA|80709|AT-hook transcription factor##AL110228|DFNB31|25861|deafness, autosomal recessive 31##NM_001083885|DFNB31|25861|deafness, autosomal recessive 31##BC142684|DFNB31|25861|deafness, autosomal recessive 31##AK056190|DFNB31|25861|deafness, autosomal recessive 31##BC142614|DFNB31|25861|deafness, autosomal recessive 31##NM_001173425|DFNB31|25861|deafness, autosomal recessive 31##NM_015404|DFNB31|25861|deafness, autosomal recessive 31##NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1	0.0	
chr3	179276674	179276802	reg1011612.p1	10.668	+	TSC_hg19_v1_chr3_-_179169361 AK001890 NM_021629	-107373	-	BC000873 TSC_hg19_v1_chr3_-_179169227 AK297174	-107494	-	BC040557 NM_033540 TSC_hg19_v1_chr3_+_179065522 BC020661 AB043589 AK000700 AK314306	-211224	+	TSC_hg19_v1_chr3_+_179280713 AB060168 NM_004301 NM_177989 NM_178042 AK098691 BC000949 AL136608 BC036371	3971	+	TSC_hg19_v1_chr3_+_179280739 AF041474	4003	+	AB061315 AK223212 TSC_hg19_v1_chr3_+_179280751 AK021756 AB015907 BC001391 AB590675 EU832285 EU832370 CR533529 CU674682	4075	+	AK001890|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##NM_021629|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##BC000873|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AK297174|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##BC040557|MFN1|55669|mitofusin 1##NM_033540|MFN1|55669|mitofusin 1##BC020661|MFN1|55669|mitofusin 1##AB043589|MFN1|55669|mitofusin 1##AK000700|MFN1|55669|mitofusin 1##AK314306|MFN1|55669|mitofusin 1##AB060168|ACTL6A|86|actin-like 6A##NM_004301|ACTL6A|86|actin-like 6A##NM_177989|ACTL6A|86|actin-like 6A##NM_178042|ACTL6A|86|actin-like 6A##AK098691|ACTL6A|86|actin-like 6A##BC000949|ACTL6A|86|actin-like 6A##AL136608|ACTL6A|86|actin-like 6A##BC036371|ACTL6A|86|actin-like 6A##AF041474|ACTL6A|86|actin-like 6A##AB061315|ACTL6A|86|actin-like 6A##AK223212|ACTL6A|86|actin-like 6A##AK021756|ACTL6A|86|actin-like 6A##AB015907|ACTL6A|86|actin-like 6A##BC001391|ACTL6A|86|actin-like 6A##EU832285|ACTL6A|86|actin-like 6A##EU832370|ACTL6A|86|actin-like 6A##CR533529|ACTL6A|86|actin-like 6A	0.0	
chr5	142097241	142097349	reg1010369.p3	10.668	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-19724	-	M74028 NM_033136 AK312301	-31270	-	M60516 NM_000800	-31676	-	TSC_hg19_v1_chr5_+_142149971 BC068555	52677	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	53013	+	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	685528	-	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##M74028|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033136|FGF1|2246|fibroblast growth factor 1 (acidic)##AK312301|FGF1|2246|fibroblast growth factor 1 (acidic)##M60516|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.617822	CTCF.p2:-8:0.618
chr15	86408474	86408587	reg1012184.p1	10.667	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-70335	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-70433	-	AF127481 NM_144767	-188263	+	NM_152336	276711	+	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	2391436	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	2602098	-	NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46	0.991744	CTCF.p2:-14:0.992
chr16	30705359	30705472	reg1009378.p2	10.666	+	TSC_hg19_v1_chr16_+_30676113 AK298229	-29299	+	NM_001105079	-29638	+	TSC_hg19_v1_chr16_+_30662286 BC010232 BC050677 NM_024031 BC011573 BC000119 AK074783	-43150	+	AB621816 TSC_hg19_v1_chr16_+_30709918	4521	+	AK128030 NM_006662	5046	+	AK293551 NM_000294 NM_001172432 TSC_hg19_v1_chr16_+_30759745 BC036735 M31606 AK289492 BC002541	54277	+	AK298229|FBRS|64319|fibrosin##NM_001105079|FBRS|64319|fibrosin##BC010232|PRR14|78994|proline rich 14##BC050677|PRR14|78994|proline rich 14##NM_024031|PRR14|78994|proline rich 14##BC011573|PRR14|78994|proline rich 14##BC000119|PRR14|78994|proline rich 14##AK074783|PRR14|78994|proline rich 14##AK128030|SRCAP|10847|Snf2-related CREBBP activator protein##NM_006662|SRCAP|10847|Snf2-related CREBBP activator protein##AK293551|PHKG2|5261|phosphorylase kinase, gamma 2 (testis)##NM_000294|PHKG2|5261|phosphorylase kinase, gamma 2 (testis)##NM_001172432|PHKG2|5261|phosphorylase kinase, gamma 2 (testis)##BC036735|PHKG2|5261|phosphorylase kinase, gamma 2 (testis)##M31606|PHKG2|5261|phosphorylase kinase, gamma 2 (testis)##AK289492|PHKG2|5261|phosphorylase kinase, gamma 2 (testis)##BC002541|PHKG2|5261|phosphorylase kinase, gamma 2 (testis)	0.997642	CTCF.p2:1:0.998
chr3	47517496	47517608	reg1009734.p1	10.666	+	TSC_hg19_v1_chr3_-_47517417 AK291484 D83782 NM_012235	-120	-	TSC_hg19_v1_chr3_-_47517349 AK300311	-215	-	AB040904 NM_015466 TSC_hg19_v1_chr3_+_47422510 AK055157 AK299906 AK295888 AK289502 AB025194 AF290614 AK295877 BC089042	-95020	+	DQ787088 BC000623 BC014204 TSC_hg19_v1_chr3_-_47555203 AK225721 AK000218 AK298202 NM_001031703	37590	-	AB463496 AF059274 TSC_hg19_v1_chr3_-_47620336 NM_001206943 NM_001206944 NM_006574	102737	-	AK294621 NM_001206942 NM_001206945	104177	-	AK291484|SCAP|22937|SREBF chaperone##D83782|SCAP|22937|SREBF chaperone##NM_012235|SCAP|22937|SREBF chaperone##AK300311|SCAP|22937|SREBF chaperone##AB040904|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_015466|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK055157|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK299906|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295888|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK289502|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AB025194|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AF290614|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295877|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##BC089042|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##DQ787088|C3orf75|54859|chromosome 3 open reading frame 75##BC000623|C3orf75|54859|chromosome 3 open reading frame 75##BC014204|C3orf75|54859|chromosome 3 open reading frame 75##AK225721|C3orf75|54859|chromosome 3 open reading frame 75##AK000218|C3orf75|54859|chromosome 3 open reading frame 75##AK298202|C3orf75|54859|chromosome 3 open reading frame 75##NM_001031703|C3orf75|54859|chromosome 3 open reading frame 75##AF059274|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_001206943|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_001206944|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_006574|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##AK294621|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_001206942|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_001206945|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)	0.992788	CTCF.p2:-5:0.978
chr17	47300934	47301068	reg1010387.p1	10.665	+	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-12924	+	NM_001198754	-13066	-	AB037886 NM_001135186 NM_016428	-13413	+	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	7142	-	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	138579	-	BC095460 TSC_hg19_v1_chr17_-_47492215	191214	-	BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AB037886|ABI3|51225|ABI family, member 3##NM_001135186|ABI3|51225|ABI family, member 3##NM_016428|ABI3|51225|ABI family, member 3##BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC095460|PHB|5245|prohibitin	0.582926	CTCF.p2:-7:0.460
chr4	3011184	3011293	reg1009817.p1	10.665	+	TSC_hg19_v1_chr4_+_2965297 AK292390 AK223581 NM_001004056 NM_001004057 NM_182982 BC110825 BC027597 BC039732 BC117320 U33054 U33055 U33056 AK293569 X97879 X97880 X97881 X98118 HQ258463 X75897	-45703	+	TSC_hg19_v1_chr4_-_2965155 AK292939	-46044	-	BC053635 TSC_hg19_v1_chr4_-_2965134 BC017358 NM_003703	-46115	-	L12392 TSC_hg19_v1_chr4_+_3076416 AB016794 NM_002111	65089	+	AK126094 NM_001042690	239528	+	TSC_hg19_v1_chr4_+_3294763 AK310999 BC028154	283522	+	AK292390|GRK4|2868|G protein-coupled receptor kinase 4##AK223581|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004056|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004057|GRK4|2868|G protein-coupled receptor kinase 4##NM_182982|GRK4|2868|G protein-coupled receptor kinase 4##BC027597|GRK4|2868|G protein-coupled receptor kinase 4##BC117320|GRK4|2868|G protein-coupled receptor kinase 4##U33054|GRK4|2868|G protein-coupled receptor kinase 4##U33055|GRK4|2868|G protein-coupled receptor kinase 4##U33056|GRK4|2868|G protein-coupled receptor kinase 4##X97879|GRK4|2868|G protein-coupled receptor kinase 4##X97880|GRK4|2868|G protein-coupled receptor kinase 4##X97881|GRK4|2868|G protein-coupled receptor kinase 4##X98118|GRK4|2868|G protein-coupled receptor kinase 4##HQ258463|GRK4|2868|G protein-coupled receptor kinase 4##X75897|GRK4|2868|G protein-coupled receptor kinase 4##AK292939|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC053635|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC017358|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##NM_003703|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##L12392|HTT|3064|huntingtin##AB016794|HTT|3064|huntingtin##NM_002111|HTT|3064|huntingtin##AK126094|C4orf44|345222|chromosome 4 open reading frame 44##NM_001042690|C4orf44|345222|chromosome 4 open reading frame 44##AK310999|RGS12|6002|regulator of G-protein signaling 12##BC028154|RGS12|6002|regulator of G-protein signaling 12	0.0	
chr9	79319614	79319766	reg1011214.p1	10.665	+	AY196297 NM_001097636	-204142	+	AY196296 NM_001097635	-226434	+	NM_001097633 NM_001490 TSC_hg19_v1_chr9_+_79074142 AY196294 AY196295 AL832647	-245574	+	AB535152 FJ808772 FJ808773 BC019095 NM_015225 TSC_hg19_v1_chr9_-_79521026	201262	-	NM_001013735	314880	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	472649	+	AY196297|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097636|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097633|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001490|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196294|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196295|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AL832647|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AB535152|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808772|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808773|PRUNE2|158471|prune homolog 2 (Drosophila)##BC019095|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_015225|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_001013735|FOXB2|442425|forkhead box B2##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)	0.976471	CTCF.p2:12:0.976
chr5	90715516	90715655	reg1012738.p1	10.664	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-36453	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-39423	+	AK091866 TSC_hg19_v1_chr5_-_90610220	-105340	-	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	2201378	-	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	2203398	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	2205083	+	BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	0.999955	CTCF.p2:28:1.000
chr6	131855412	131855517	reg1009767.p1	10.664	+	NM_004842 NM_138633	-284166	+	NM_016377 TSC_hg19_v1_chr6_+_131456855 AK300587	-398617	+	TSC_hg19_v1_chr6_-_131384387 AK295124 NM_001135554 NM_001135555 NM_001199388 NM_001431	-471040	-	NM_000045 NM_001244438 AY074488 BC005321 TSC_hg19_v1_chr6_+_131894365 M14502 BC020653 CU676606 AB590280 DQ892039 DQ895230 BT006741	38918	+	AB385438 AF135022 AM393572 EU832308 EU832392 EU392526 EU392528 EU392529 EU392530 EU392531 AK315030 AF105332 EU392520 EU392522 EU392527 EU392532 BC060759 TSC_hg19_v1_chr6_-_131949372 AF104255 AL136776 AB033042 BC007088 NM_004830 NM_015979	93823	-	AK024899 AK296080 AK310691 AK315893 NM_005021 AK292903 EF560735 AF005632 AB587329 DQ234347	103018	+	NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_016377|AKAP7|9465|A kinase (PRKA) anchor protein 7##AK300587|AKAP7|9465|A kinase (PRKA) anchor protein 7##AK295124|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001135554|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001135555|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199388|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001431|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_000045|ARG1|383|arginase, liver##NM_001244438|ARG1|383|arginase, liver##AY074488|ARG1|383|arginase, liver##BC005321|ARG1|383|arginase, liver##M14502|ARG1|383|arginase, liver##BC020653|ARG1|383|arginase, liver##DQ892039|ARG1|383|arginase, liver##DQ895230|ARG1|383|arginase, liver##BT006741|ARG1|383|arginase, liver##AF135022|MED23|9439|mediator complex subunit 23##AM393572|MED23|9439|mediator complex subunit 23##EU832308|MED23|9439|mediator complex subunit 23##EU832392|MED23|9439|mediator complex subunit 23##EU392526|MED23|9439|mediator complex subunit 23##EU392528|MED23|9439|mediator complex subunit 23##EU392529|MED23|9439|mediator complex subunit 23##EU392530|MED23|9439|mediator complex subunit 23##EU392531|MED23|9439|mediator complex subunit 23##AK315030|MED23|9439|mediator complex subunit 23##AF105332|MED23|9439|mediator complex subunit 23##EU392520|MED23|9439|mediator complex subunit 23##EU392522|MED23|9439|mediator complex subunit 23##EU392527|MED23|9439|mediator complex subunit 23##EU392532|MED23|9439|mediator complex subunit 23##BC060759|MED23|9439|mediator complex subunit 23##AF104255|MED23|9439|mediator complex subunit 23##AL136776|MED23|9439|mediator complex subunit 23##AB033042|MED23|9439|mediator complex subunit 23##BC007088|MED23|9439|mediator complex subunit 23##NM_004830|MED23|9439|mediator complex subunit 23##NM_015979|MED23|9439|mediator complex subunit 23##AK024899|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK296080|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK310691|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK315893|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##NM_005021|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK292903|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##EF560735|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##DQ234347|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	0.911594	CTCF.p2:23:0.912
chr1	200941227	200941332	reg1009605.p2	10.663	+	AK316510 NM_001142569 TSC_hg19_v1_chr1_+_200864027 AK303885	-77282	+	TSC_hg19_v1_chr1_+_200860668 NM_018265 AK001583 AK001763 BC106877	-80633	+	BC126386 BC126388 AK315339 NM_005298	-99156	+	AM177180 AB527174 BC137281 BC144557 TSC_hg19_v1_chr1_-_200992598	51275	-	TSC_hg19_v1_chr1_-_200992826 AB007918 NM_001252100 NM_001252102 NM_001252103 NM_017596	51552	-	TSC_hg19_v1_chr1_+_200993085 AK022893 BC037533 BC016656	51808	+	AK316510|C1orf106|55765|chromosome 1 open reading frame 106##NM_001142569|C1orf106|55765|chromosome 1 open reading frame 106##AK303885|C1orf106|55765|chromosome 1 open reading frame 106##NM_018265|C1orf106|55765|chromosome 1 open reading frame 106##AK001583|C1orf106|55765|chromosome 1 open reading frame 106##AK001763|C1orf106|55765|chromosome 1 open reading frame 106##BC106877|C1orf106|55765|chromosome 1 open reading frame 106##BC126386|GPR25|2848|G protein-coupled receptor 25##BC126388|GPR25|2848|G protein-coupled receptor 25##AK315339|GPR25|2848|G protein-coupled receptor 25##NM_005298|GPR25|2848|G protein-coupled receptor 25##AM177180|KIF21B|23046|kinesin family member 21B##BC137281|KIF21B|23046|kinesin family member 21B##BC144557|KIF21B|23046|kinesin family member 21B##AB007918|KIF21B|23046|kinesin family member 21B##NM_001252100|KIF21B|23046|kinesin family member 21B##NM_001252102|KIF21B|23046|kinesin family member 21B##NM_001252103|KIF21B|23046|kinesin family member 21B##NM_017596|KIF21B|23046|kinesin family member 21B	0.932107	CTCF.p2:-16:0.932
chr21	16110409	16110514	reg1008409.p2	10.663	+	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	-191812	-	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-354988	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-521964	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	326756	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	991864	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	992080	+	BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25	0.96784	CTCF.p2:-5:0.968
chr8	66977295	66977422	reg1009207.p1	10.662	+	NM_033105 BC016742 AF368276 AL133660	-43539	+	TSC_hg19_v1_chr8_-_66754300 AK292680	-223066	-	NM_001242318	-223390	-	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	61982	+	BC002599 BC011031 AK075431 NM_000756	113409	-	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	363948	+	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AK292680|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	0.981255	CTCF.p2:-7:0.981
chrX	38613491	38613628	reg1012617.p1	10.661	+	TSC_hg19_v1_chrX_+_38420794 NM_004615 AB062057 L10373 BC018036 AK293534 AK293178 AK293552 AK312343 D10653 CU676142 DQ892093 DQ895571 D29808 AB102665	-192807	+	BC107153 BC107154 NM_000531 BC114496 AK292757 K02100 BC074745	-401735	+	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	-426764	-	TSC_hg19_v1_chrX_+_38660678 NM_001098790 NM_001098791	47109	+	TSC_hg19_v1_chrX_+_38660711 BC019332	47147	+	BC008908 NM_021242	49513	+	NM_004615|TSPAN7|7102|tetraspanin 7##AB062057|TSPAN7|7102|tetraspanin 7##L10373|TSPAN7|7102|tetraspanin 7##BC018036|TSPAN7|7102|tetraspanin 7##AK293534|TSPAN7|7102|tetraspanin 7##AK293178|TSPAN7|7102|tetraspanin 7##AK293552|TSPAN7|7102|tetraspanin 7##AK312343|TSPAN7|7102|tetraspanin 7##D10653|TSPAN7|7102|tetraspanin 7##DQ892093|TSPAN7|7102|tetraspanin 7##DQ895571|TSPAN7|7102|tetraspanin 7##D29808|TSPAN7|7102|tetraspanin 7##AB102665|TSPAN7|7102|tetraspanin 7##BC107153|OTC|5009|ornithine carbamoyltransferase##BC107154|OTC|5009|ornithine carbamoyltransferase##NM_000531|OTC|5009|ornithine carbamoyltransferase##BC114496|OTC|5009|ornithine carbamoyltransferase##AK292757|OTC|5009|ornithine carbamoyltransferase##K02100|OTC|5009|ornithine carbamoyltransferase##BC074745|OTC|5009|ornithine carbamoyltransferase##DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001098790|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_001098791|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC019332|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))	0.265412	CTCF.p2:-2:0.265
chr19	17607189	17607322	reg1009852.p2	10.660	+	TSC_hg19_v1_chr19_+_17581338 AK296355 AK315935	-25915	+	TSC_hg19_v1_chr19_+_17581292 AK299852 BC059399 NM_198580	-25955	+	AK294238 TSC_hg19_v1_chr19_+_17579599	-27667	+	TSC_hg19_v1_chr19_-_17622285 AK125289	15032	-	TSC_hg19_v1_chr19_+_17622443 NM_012088	15176	+	TSC_hg19_v1_chr19_+_17622445 BC017706 BC014006 AJ243972 AB463386 DQ893462 DQ896322	15207	+	AK296355|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK315935|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK299852|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##BC059399|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##NM_198580|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK294238|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK125289|LOC100507551|100507551|uncharacterized LOC100507551##NM_012088|PGLS|25796|6-phosphogluconolactonase##BC017706|PGLS|25796|6-phosphogluconolactonase##BC014006|PGLS|25796|6-phosphogluconolactonase##AJ243972|PGLS|25796|6-phosphogluconolactonase##DQ893462|PGLS|25796|6-phosphogluconolactonase##DQ896322|PGLS|25796|6-phosphogluconolactonase	0.933786	CTCF.p2:-13:0.934
chr22	36019434	36019556	reg1009212.p1	10.659	+	TSC_hg19_v1_chr22_-_36019368 NM_203377	-114	-	CR541949 CU013116 CU013404 DQ893679 DQ896050 AB528844 CR456516 TSC_hg19_v1_chr22_-_36013480 AK300657 BC014547 NM_005368 AK314057 NM_203378	-6067	-	BC013419 NM_014310 CR456477	-82102	+	TSC_hg19_v1_chr22_+_36044432 AY014879 NM_030641 BC047864 AX775805 AL834420 AK095881	24941	+	TSC_hg19_v1_chr22_+_36044482 BC038950 AY358210	25005	+	AB528803 AY014878 NM_030642	94422	+	NM_203377|MB|4151|myoglobin##CR541949|MB|4151|myoglobin##CU013116|MB|4151|myoglobin##CU013404|MB|4151|myoglobin##DQ893679|MB|4151|myoglobin##DQ896050|MB|4151|myoglobin##CR456516|MB|4151|myoglobin##AK300657|MB|4151|myoglobin##BC014547|MB|4151|myoglobin##NM_005368|MB|4151|myoglobin##AK314057|MB|4151|myoglobin##NM_203378|MB|4151|myoglobin##BC013419|RASD2|23551|RASD family, member 2##NM_014310|RASD2|23551|RASD family, member 2##CR456477|RASD2|23551|RASD family, member 2##AY014879|APOL6|80830|apolipoprotein L, 6##NM_030641|APOL6|80830|apolipoprotein L, 6##BC047864|APOL6|80830|apolipoprotein L, 6##AL834420|APOL6|80830|apolipoprotein L, 6##AK095881|APOL6|80830|apolipoprotein L, 6##BC038950|APOL6|80830|apolipoprotein L, 6##AY358210|APOL6|80830|apolipoprotein L, 6##AY014878|APOL5|80831|apolipoprotein L, 5##NM_030642|APOL5|80831|apolipoprotein L, 5	0.999861	CTCF.p2:20:1.000
chr8	22876842	22876983	reg1010660.p2	10.659	+	TSC_hg19_v1_chr8_+_22857415 AK292863 AY009093	-19475	+	AK314366 AK098744 TSC_hg19_v1_chr8_+_22857390	-19540	+	TSC_hg19_v1_chr8_+_22857067 AB018260 NM_015178	-19835	+	AB451272 AB451399 AF012628 AF018657 AF018658 AF020501 AF022386 CR541898 AB385139 TSC_hg19_v1_chr8_-_22926429	49507	-	TSC_hg19_v1_chr8_-_22926545 AF192548 AF016266 AF016268 AF153687 AK291216 AF012535 AF016849 AY358277 BX538104 AK298602 BC001281 NM_003842 NM_147187	49682	-	NM_003841 AK298664 BC017852 TSC_hg19_v1_chr8_+_22960433 AK313213 AK298718 AF012536 AY358281 AF016267 AF033854 AF014794 BC125041 BC125042 AF020502 AF012629 CR541857	83568	+	AK292863|RHOBTB2|23221|Rho-related BTB domain containing 2##AY009093|RHOBTB2|23221|Rho-related BTB domain containing 2##AK314366|RHOBTB2|23221|Rho-related BTB domain containing 2##AK098744|RHOBTB2|23221|Rho-related BTB domain containing 2##AB018260|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_015178|RHOBTB2|23221|Rho-related BTB domain containing 2##AB451272|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AB451399|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012628|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018657|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018658|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF020501|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF022386|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##CR541898|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF192548|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016266|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016268|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF153687|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK291216|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012535|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016849|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AY358277|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BX538104|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK298602|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BC001281|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003842|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_147187|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003841|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298664|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC017852|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK313213|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298718|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012536|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AY358281|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF016267|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF033854|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF014794|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125041|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125042|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF020502|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012629|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##CR541857|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain	0.994501	CTCF.p2:9:0.995
chr12	55143116	55143251	reg1011600.p1	10.658	+	AY590150 AF144011 BC062682 BC069108 NM_053283 EF503687 EF503688 EF503689	-100978	-	CU686745 CU687522 AF238867 BC069317 NM_033277 BC062217	-114532	-	CR457003 AY063766 U48707 TSC_hg19_v1_chr12_-_54982398 BC022470 NM_006741 AK123969	-160819	-	NM_058173 AF414087 AY359062 BC111421 AY651259	105149	+	BC132732 BC132734 NM_001098815	232438	-	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	235319	-	AY590150|DCD|117159|dermcidin##AF144011|DCD|117159|dermcidin##BC062682|DCD|117159|dermcidin##BC069108|DCD|117159|dermcidin##NM_053283|DCD|117159|dermcidin##EF503687|DCD|117159|dermcidin##EF503688|DCD|117159|dermcidin##EF503689|DCD|117159|dermcidin##AF238867|LACRT|90070|lacritin##BC069317|LACRT|90070|lacritin##NM_033277|LACRT|90070|lacritin##BC062217|LACRT|90070|lacritin##CR457003|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AY063766|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##U48707|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##BC022470|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_006741|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AK123969|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748	0.998828	CTCF.p2:-10:0.999
chr6	149067828	149067959	reg1008742.p1	10.658	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-403702	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-403903	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	-404130	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	316	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	571210	+	AK315038 NM_015093 AK307650	571548	+	AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##NM_005715|UST|10090|uronyl-2-sulfotransferase##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2	0.022664	
chr12	67255057	67255181	reg1011027.p1	10.657	+	TSC_hg19_v1_chr12_-_67072881 AK095519 NM_001178074 NM_021150	-182217	-	BC115393 BC115394 TSC_hg19_v1_chr12_-_67072757 AK307576	-182363	-	TSC_hg19_v1_chr12_+_66696305 NM_033647 BC143409 BC143411 AK290894 AK024464 AB527324 AF319995	-558790	+	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	407983	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	408053	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	408311	+	AK095519|GRIP1|23426|glutamate receptor interacting protein 1##NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1##NM_021150|GRIP1|23426|glutamate receptor interacting protein 1##BC115393|GRIP1|23426|glutamate receptor interacting protein 1##BC115394|GRIP1|23426|glutamate receptor interacting protein 1##AK307576|GRIP1|23426|glutamate receptor interacting protein 1##NM_033647|HELB|92797|helicase (DNA) B##BC143409|HELB|92797|helicase (DNA) B##BC143411|HELB|92797|helicase (DNA) B##AK290894|HELB|92797|helicase (DNA) B##AF319995|HELB|92797|helicase (DNA) B##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1	0.999568	CTCF.p2:5:1.000
chr7	92320967	92321106	reg1011940.p1	10.657	+	TSC_hg19_v1_chr7_-_92219705 BC079834 BC090868 BC057771 AK125498 AL833918 BC017874 NM_001040057 NM_152789 BC062706	-101338	-	TSC_hg19_v1_chr7_-_92219660 BC032461 BC157872	-101394	-	BC104865 BC104867 BC143576 NM_032120 CR933641 BC044570 AL136619 BC020919 BC033561 CR936726 AK294626 AK294812 AF161422 BC065716 CR533549	-162930	+	AB528631 CU690894 X66365 TSC_hg19_v1_chr7_-_92462894	141731	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	142184	-	AK313491 TSC_hg19_v1_chr7_-_92465884	144862	-	BC090868|FAM133B|257415|family with sequence similarity 133, member B##BC057771|FAM133B|257415|family with sequence similarity 133, member B##AK125498|FAM133B|257415|family with sequence similarity 133, member B##AL833918|FAM133B|257415|family with sequence similarity 133, member B##BC017874|FAM133B|257415|family with sequence similarity 133, member B##NM_001040057|FAM133B|257415|family with sequence similarity 133, member B##NM_152789|FAM133B|257415|family with sequence similarity 133, member B##BC062706|FAM133B|257415|family with sequence similarity 133, member B##BC032461|FAM133B|257415|family with sequence similarity 133, member B##BC157872|FAM133B|257415|family with sequence similarity 133, member B##BC104865|RBM48|84060|RNA binding motif protein 48##BC104867|RBM48|84060|RNA binding motif protein 48##BC143576|RBM48|84060|RNA binding motif protein 48##NM_032120|RBM48|84060|RNA binding motif protein 48##CR933641|RBM48|84060|RNA binding motif protein 48##BC044570|RBM48|84060|RNA binding motif protein 48##AL136619|RBM48|84060|RNA binding motif protein 48##BC020919|RBM48|84060|RNA binding motif protein 48##BC033561|RBM48|84060|RNA binding motif protein 48##CR936726|RBM48|84060|RNA binding motif protein 48##AK294626|RBM48|84060|RNA binding motif protein 48##AK294812|RBM48|84060|RNA binding motif protein 48##AF161422|RBM48|84060|RNA binding motif protein 48##BC065716|RBM48|84060|RNA binding motif protein 48##CR533549|RBM48|84060|RNA binding motif protein 48##X66365|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6	0.4991	CTCF.p2:-9:0.499
chr11	77757336	77757464	reg1009524.p1	10.656	+	BC001062 BC001929 NM_023930	-23098	-	BC009995 TSC_hg19_v1_chr11_-_77705714 AK290866 BC015664 NM_033547	-51685	-	AL834171 EU446555 TSC_hg19_v1_chr11_-_77705710 CU679559 AK000455 BC018672	-51716	-	TSC_hg19_v1_chr11_+_77774906 AK311975 NM_003251 BC031989 EU447014	17513	+	CR533448 AB528753 AM392713 TSC_hg19_v1_chr11_-_77790909 AK022785 AF087659 AF369951 AK098173 AL050278 AF369952 AK023013 AF070652 BC007323	33474	-	AF087899 NM_001203260 NM_001203261 NM_001203262 NM_001204054 NM_001204055 NM_004549	33864	-	BC001062|KCTD14|65987|potassium channel tetramerisation domain containing 14##BC001929|KCTD14|65987|potassium channel tetramerisation domain containing 14##NM_023930|KCTD14|65987|potassium channel tetramerisation domain containing 14##BC009995|INTS4|92105|integrator complex subunit 4##AK290866|INTS4|92105|integrator complex subunit 4##BC015664|INTS4|92105|integrator complex subunit 4##NM_033547|INTS4|92105|integrator complex subunit 4##AL834171|INTS4|92105|integrator complex subunit 4##EU446555|INTS4|92105|integrator complex subunit 4##AK000455|INTS4|92105|integrator complex subunit 4##BC018672|INTS4|92105|integrator complex subunit 4##AK311975|THRSP|7069|thyroid hormone responsive##NM_003251|THRSP|7069|thyroid hormone responsive##BC031989|THRSP|7069|thyroid hormone responsive##EU447014|THRSP|7069|thyroid hormone responsive##CR533448|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AM392713|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AK022785|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF087659|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF369951|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AK098173|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AL050278|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF369952|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AK023013|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF070652|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##BC007323|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF087899|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##NM_001203260|NDUFC2-KCTD14|100532726|NDUFC2-KCTD14 readthrough##NM_001203261|NDUFC2-KCTD14|100532726|NDUFC2-KCTD14 readthrough##NM_001203262|NDUFC2-KCTD14|100532726|NDUFC2-KCTD14 readthrough##NM_001204054|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##NM_001204055|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##NM_004549|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa	0.999758	CTCF.p2:19:1.000
chr1	219740800	219740938	reg1011215.p1	10.656	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-393627	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-393711	+	M19154 TSC_hg19_v1_chr1_+_218519634	-1221264	+	BC036078 TSC_hg19_v1_chr1_-_220101540	360660	-	AB464233 TSC_hg19_v1_chr1_-_220101784	360922	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	361096	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.934577	CTCF.p2:17:0.935
chr19	3485123	3485234	reg1009614.p1	10.656	+	TSC_hg19_v1_chr19_-_3480524 BC146979 BC146984 NM_001136503	-4652	-	CU680225 TSC_hg19_v1_chr19_-_3462913	-22339	-	TSC_hg19_v1_chr19_+_3366607 X92857 AB590220 CU680224 DQ893655 DQ895795	-118563	+	BC002817 NM_031304 TSC_hg19_v1_chr19_-_3500673	15471	-	NM_001145165	15759	-	TSC_hg19_v1_chr19_+_3506308 NM_016263 BC013413 AF102507 AF083810	21137	+	BC146979|C19orf77|284422|chromosome 19 open reading frame 77##BC146984|C19orf77|284422|chromosome 19 open reading frame 77##NM_001136503|C19orf77|284422|chromosome 19 open reading frame 77##X92857|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ893655|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ895795|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC002817|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase##NM_031304|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase##NM_001145165|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase##NM_016263|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##BC013413|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AF102507|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AF083810|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)	0.997298	CTCF.p2:3:0.997
chr19	17505870	17505995	reg1009247.p1	10.655	+	CU691156 TSC_hg19_v1_chr19_-_17488155 AF348827 BC050365 BC056414 NM_031310 AF326591 AL834363 AK096030 AK313837	-17800	-	NM_001128855 NM_032620 NM_133644 AF360742 AF360743 AY078987 AY078988 AK298485 AK027606 AK291929 BC019261 TSC_hg19_v1_chr19_+_17448396 BC017207 AK311442 AF360744 DQ892217 DQ895413 CU676414 CU677863	-57560	+	NM_001195422 AK297953	-60133	+	CU689786 D28137 NM_004335 AK223124 AK291099 AK303593 TSC_hg19_v1_chr19_-_17516428 BC033873	10487	-	AK311380 AK055623 TSC_hg19_v1_chr19_+_17516630	10634	+	TSC_hg19_v1_chr19_+_17530855 AK057057 AK289487	24916	+	AF348827|PLVAP|83483|plasmalemma vesicle associated protein##BC050365|PLVAP|83483|plasmalemma vesicle associated protein##BC056414|PLVAP|83483|plasmalemma vesicle associated protein##NM_031310|PLVAP|83483|plasmalemma vesicle associated protein##AF326591|PLVAP|83483|plasmalemma vesicle associated protein##AL834363|PLVAP|83483|plasmalemma vesicle associated protein##AK096030|PLVAP|83483|plasmalemma vesicle associated protein##AK313837|PLVAP|83483|plasmalemma vesicle associated protein##NM_001128855|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_032620|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_133644|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360742|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360743|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AY078987|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AY078988|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK298485|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK027606|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK291929|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC019261|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC017207|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK311442|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360744|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##DQ892217|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##DQ895413|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_001195422|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK297953|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##D28137|BST2|684|bone marrow stromal cell antigen 2##NM_004335|BST2|684|bone marrow stromal cell antigen 2##AK223124|BST2|684|bone marrow stromal cell antigen 2##AK291099|BST2|684|bone marrow stromal cell antigen 2##AK303593|BST2|684|bone marrow stromal cell antigen 2##BC033873|BST2|684|bone marrow stromal cell antigen 2##AK311380|LOC100507535|100507535|uncharacterized LOC100507535##AK055623|LOC100507535|100507535|uncharacterized LOC100507535##AK057057|FAM125A|93343|family with sequence similarity 125, member A##AK289487|FAM125A|93343|family with sequence similarity 125, member A	0.030323	
chr5	171889334	171889429	reg1009286.p1	10.655	+	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	-7878	-	AB430862 DQ109556 BC038561 TSC_hg19_v1_chr5_-_171881387	-8010	-	NM_152277 TSC_hg19_v1_chr5_-_171710808	-178566	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	178872	+	AF275799 TSC_hg19_v1_chr5_-_172083715	194262	-	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	308830	-	AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##AB430862|SH3PXD2B|285590|SH3 and PX domains 2B##DQ109556|SH3PXD2B|285590|SH3 and PX domains 2B##BC038561|SH3PXD2B|285590|SH3 and PX domains 2B##NM_152277|UBTD2|92181|ubiquitin domain containing 2##GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1	0.998279	CTCF.p2:-8:0.998
chr11	35019536	35019674	reg1006217.p1	10.654	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-81448	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-81716	-	NM_001135024 NM_001166158 NM_003477	-81929	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	140795	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	141129	+	TSC_hg19_v1_chr11_+_35160821 M59040	141213	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr20	23427381	23427488	reg1010086.p2	10.654	+	AY707749 NM_138283	-7113	+	CU687460 EU832496 EU832577 TSC_hg19_v1_chr20_-_23402111 BC008463 AK294703 BC060840 AK124876 BC047426 AK307709 BC026310 AK296385 BX648330 AK295791 NM_022080	-25338	-	AB100265 AB463678 BC125188 BC154409 NM_022482	-82414	+	BC121079 BC121080 AF335480 AF335481 NM_080830 NM_130794	6045	-	AF059244 NM_005492	44331	+	AY358615 AK312112 BC029656 NM_080610	121922	-	AY707749|CSTL1|128817|cystatin-like 1##NM_138283|CSTL1|128817|cystatin-like 1##EU832496|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##EU832577|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##BC008463|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##AK294703|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##BC060840|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##AK124876|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##BC047426|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##AK307709|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##BC026310|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##AK296385|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##BX648330|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##AK295791|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##NM_022080|NAPB|63908|N-ethylmaleimide-sensitive factor attachment protein, beta##AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1##BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1##BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1##NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1##BC121079|CST11|140880|cystatin 11##BC121080|CST11|140880|cystatin 11##AF335480|CST11|140880|cystatin 11##AF335481|CST11|140880|cystatin 11##NM_080830|CST11|140880|cystatin 11##NM_130794|CST11|140880|cystatin 11##AF059244|CST8|10047|cystatin 8 (cystatin-related epididymal specific)##NM_005492|CST8|10047|cystatin 8 (cystatin-related epididymal specific)##AY358615|CST9L|128821|cystatin 9-like##AK312112|CST9L|128821|cystatin 9-like##BC029656|CST9L|128821|cystatin 9-like##NM_080610|CST9L|128821|cystatin 9-like	0.987226	CTCF.p2:11:0.987
chr9	124755007	124755139	reg1011524.p1	10.654	+	AY032952 NM_138709	-250010	+	TSC_hg19_v1_chr9_+_124461442 AF367051	-293567	+	NM_032552	-425675	+	TSC_hg19_v1_chr9_-_124855560 AK125178	100515	-	AF521886 NM_001139442 NM_194252	100811	-	TSC_hg19_v1_chr9_-_124922039 BC001016 AF044953	166939	-	AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##AF367051|DAB2IP|153090|DAB2 interacting protein##NM_032552|DAB2IP|153090|DAB2 interacting protein##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AF521886|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_001139442|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_194252|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##BC001016|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AF044953|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa	0.999824	CTCF.p2:13:1.000
chr1	210316959	210317068	reg1010117.p2	10.653	+	AJ617623 TSC_hg19_v1_chr1_+_210111595 AK091517 AX747035 BC130323 BC144154 BC144155 BC144157 AJ617625	-205424	+	NM_001146261 NM_001146262 NM_001146264 NM_153262 TSC_hg19_v1_chr1_+_210111559	-205463	+	BX648514 CU692760 TSC_hg19_v1_chr1_+_210001421	-315603	+	BC012083 NM_019605 AK096381	89198	+	NM_001122834 NM_001170564 AK297193	184583	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	185252	+	AJ617623|SYT14|255928|synaptotagmin XIV##AK091517|SYT14|255928|synaptotagmin XIV##BC130323|SYT14|255928|synaptotagmin XIV##BC144154|SYT14|255928|synaptotagmin XIV##BC144155|SYT14|255928|synaptotagmin XIV##BC144157|SYT14|255928|synaptotagmin XIV##AJ617625|SYT14|255928|synaptotagmin XIV##NM_001146261|SYT14|255928|synaptotagmin XIV##NM_001146262|SYT14|255928|synaptotagmin XIV##NM_001146264|SYT14|255928|synaptotagmin XIV##NM_153262|SYT14|255928|synaptotagmin XIV##BX648514|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##BC012083|SERTAD4|56256|SERTA domain containing 4##NM_019605|SERTAD4|56256|SERTA domain containing 4##AK096381|SERTAD4|56256|SERTA domain containing 4##NM_001122834|HHAT|55733|hedgehog acyltransferase##NM_001170564|HHAT|55733|hedgehog acyltransferase##AK297193|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase	0.93027	CTCF.p2:-5:0.930
chr12	71113717	71113824	reg1010301.p1	10.653	+	AB587339 TSC_hg19_v1_chr12_-_71031179 AK128562 BC051329 BX647238 CR749546 BX648245 AK126121 NM_001109754	-82574	-	BC101679 BC113463 BC143356 BC143360 NM_001206971 NM_001206972 NM_002837 X54131	-110148	-	TSC_hg19_v1_chr12_+_70861858 BC031864	-251902	+	BC119777 BC122866 BC110900 TSC_hg19_v1_chr12_-_71148231	34379	-	X82635 TSC_hg19_v1_chr12_-_71148363 U77917 BC072386	34580	-	TSC_hg19_v1_chr12_-_71148389 BC092469 NM_130846 U77916 BX571751 AK304457 AK304672 NM_001207016	34690	-	AK128562|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC051329|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX647238|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##CR749546|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX648245|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##AK126121|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001109754|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206971|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206972|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##NM_001207016|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	0.756134	CTCF.p2:16:0.756
chr20	50996391	50996525	reg1012039.p1	10.653	+	BC012759 BC041622 NM_018197 NM_022088 NM_199426 NM_199427	-187935	-	BT009760 AB527686 BC021087 AK001744 TSC_hg19_v1_chr20_-_50808313 AK090547 BC031524 AK001596 AK222712	-188203	-	AY170621 AY170622 AY172738 BC111714 AK001666 NM_020436	-577462	-	BX640770 NM_173485	592487	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	593320	+	AK302570 NM_001193421	805363	+	BC012759|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC041622|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_018197|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_022088|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199426|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199427|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BT009760|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC021087|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001744|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK090547|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC031524|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001596|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK222712|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AY170621|SALL4|57167|sal-like 4 (Drosophila)##AY170622|SALL4|57167|sal-like 4 (Drosophila)##AY172738|SALL4|57167|sal-like 4 (Drosophila)##BC111714|SALL4|57167|sal-like 4 (Drosophila)##AK001666|SALL4|57167|sal-like 4 (Drosophila)##NM_020436|SALL4|57167|sal-like 4 (Drosophila)##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2##AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2	0.970672	CTCF.p2:-2:0.971
chr4	7763505	7763627	reg1011782.p1	10.652	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	-326910	-	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-569171	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-693765	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	177822	-	TSC_hg19_v1_chr4_-_8073714 AK094798	310150	-	TSC_hg19_v1_chr4_-_8129388 AK301060	365819	-	BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2	0.34294	CTCF.p2:-3:0.343
chr16	85524730	85524883	reg1009743.p1	10.651	+	BC093665 BC111944 AK126284 NM_198491	-378752	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-463436	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-479677	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	120215	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	122147	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	197736	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.083834	
chr18	42964478	42964616	reg1011196.p1	10.651	+	NM_001242692 AK292422	-171595	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-703679	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-704433	+	AF349446 NM_007163	230218	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	339557	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	339610	+	NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.998992	CTCF.p2:16:0.999
chr4	236133	236258	reg1011370.p1	10.650	+	TSC_hg19_v1_chr4_+_124389 AK096662 AL833758 BC104026 BC104028	-111821	+	TSC_hg19_v1_chr4_+_53214 AK300505 AK311343 BC036110 BC043151 AK301848 AK309855 AK056302 BC020836 BC009008 BX537887 NM_182524	-182971	+	None	None	None	AK302099 NM_001137608	53748	-	TSC_hg19_v1_chr4_+_331602 NM_003441	95400	+	TSC_hg19_v1_chr4_+_331608 BC036854 BC057244 L15309 BC074853	95475	+	AK096662|ZNF718|255403|zinc finger protein 718##AL833758|ZNF718|255403|zinc finger protein 718##BC104026|ZNF718|255403|zinc finger protein 718##BC104028|ZNF718|255403|zinc finger protein 718##AK300505|ZNF595|152687|zinc finger protein 595##BC036110|ZNF595|152687|zinc finger protein 595##BC043151|ZNF595|152687|zinc finger protein 595##AK301848|ZNF595|152687|zinc finger protein 595##AK309855|ZNF595|152687|zinc finger protein 595##AK056302|ZNF595|152687|zinc finger protein 595##BC020836|ZNF718|255403|zinc finger protein 718##BX537887|ZNF595|152687|zinc finger protein 595##NM_182524|ZNF595|152687|zinc finger protein 595##AK302099|ZNF732|654254|zinc finger protein 732##NM_001137608|ZNF732|654254|zinc finger protein 732##NM_003441|ZNF141|7700|zinc finger protein 141##BC036854|ZNF141|7700|zinc finger protein 141##BC057244|ZNF141|7700|zinc finger protein 141##L15309|ZNF141|7700|zinc finger protein 141##BC074853|ZNF141|7700|zinc finger protein 141	0.993658	CTCF.p2:22:0.994
chr5	139619570	139619690	reg1007835.p1	10.650	+	TSC_hg19_v1_chr5_+_139554722 BC023982 BC013643 AK225992 AK311640 AK312045 AJ245877	-64859	+	TSC_hg19_v1_chr5_+_139554672 NM_032412	-64976	+	BC041380 NM_001007189	-114111	+	AB464063 TSC_hg19_v1_chr5_-_139682672	63034	-	AK315353 TSC_hg19_v1_chr5_-_139682676	63045	-	TSC_hg19_v1_chr5_-_139682680 BC011869 BC003620 BC006202 AK223394 NM_002622	63054	-	BC023982|C5orf32|84418|chromosome 5 open reading frame 32##BC013643|C5orf32|84418|chromosome 5 open reading frame 32##AK225992|C5orf32|84418|chromosome 5 open reading frame 32##AK312045|C5orf32|84418|chromosome 5 open reading frame 32##AJ245877|C5orf32|84418|chromosome 5 open reading frame 32##NM_032412|C5orf32|84418|chromosome 5 open reading frame 32##BC041380|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##NM_001007189|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##AK315353|PFDN1|5201|prefoldin subunit 1##BC011869|PFDN1|5201|prefoldin subunit 1##BC003620|PFDN1|5201|prefoldin subunit 1##BC006202|PFDN1|5201|prefoldin subunit 1##AK223394|PFDN1|5201|prefoldin subunit 1##NM_002622|PFDN1|5201|prefoldin subunit 1	0.859293	CTCF.p2:0:0.859
chr8	29873712	29873834	reg1009271.p2	10.650	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-665703	-	AL137704 NM_057158	-667452	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-753159	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	66701	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	66799	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	79170	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.982071	CTCF.p2:7:0.982
chr1	157961869	157962001	reg1009961.p1	10.649	+	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	-150373	-	CU689698 AF329488 BC021274 AK315748 AK096690 BC033690 AF459634 AY043464 NM_001159397 NM_001159398 NM_052938	-172050	-	CU686705 AK301113 AY043465 AF459633 AY358130 AK303549 BC069185 NM_030764	-215043	-	AY302131 NM_018240	1127	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	1453	+	BC027926 NM_001766	187801	+	DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like##AF329488|FCRL1|115350|Fc receptor-like 1##BC021274|FCRL1|115350|Fc receptor-like 1##AK315748|FCRL1|115350|Fc receptor-like 1##AK096690|FCRL1|115350|Fc receptor-like 1##BC033690|FCRL1|115350|Fc receptor-like 1##AF459634|FCRL1|115350|Fc receptor-like 1##AY043464|FCRL1|115350|Fc receptor-like 1##NM_001159397|FCRL1|115350|Fc receptor-like 1##NM_001159398|FCRL1|115350|Fc receptor-like 1##NM_052938|FCRL1|115350|Fc receptor-like 1##AK301113|FCRL2|79368|Fc receptor-like 2##AY043465|FCRL2|79368|Fc receptor-like 2##AF459633|FCRL2|79368|Fc receptor-like 2##AY358130|FCRL2|79368|Fc receptor-like 2##AK303549|FCRL2|79368|Fc receptor-like 2##BC069185|FCRL2|79368|Fc receptor-like 2##NM_030764|FCRL2|79368|Fc receptor-like 2##AY302131|KIRREL|55243|kin of IRRE like (Drosophila)##NM_018240|KIRREL|55243|kin of IRRE like (Drosophila)##BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule	0.318522	CTCF.p2:-6:0.319
chr3	33677679	33677809	reg1010297.p2	10.648	+	TSC_hg19_v1_chr3_-_33481898 AK293100 NM_001128161	-195844	-	TSC_hg19_v1_chr3_-_33481868 BC047235 NM_001128160 NM_014517	-195879	-	AK023274 AF198487 TSC_hg19_v1_chr3_-_33481564	-196208	-	AB385365 AB014527 TSC_hg19_v1_chr3_-_33700598	22802	-	NM_001207044 AJ288058	23257	-	BC140778 TSC_hg19_v1_chr3_-_33759667	81860	-	AK293100|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_001128161|UBP1|7342|upstream binding protein 1 (LBP-1a)##BC047235|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_001128160|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_014517|UBP1|7342|upstream binding protein 1 (LBP-1a)##AK023274|UBP1|7342|upstream binding protein 1 (LBP-1a)##AF198487|UBP1|7342|upstream binding protein 1 (LBP-1a)##AB014527|CLASP2|23122|cytoplasmic linker associated protein 2##NM_001207044|CLASP2|23122|cytoplasmic linker associated protein 2##BC140778|CLASP2|23122|cytoplasmic linker associated protein 2	0.062084	
chr11	59961203	59961346	reg1012143.p1	10.647	+	AK291870 NM_001247999 NM_152852	-9136	-	AK301387 TSC_hg19_v1_chr11_-_59950526 AB013104 AF350502 AF350503 AF142409 BC022854 BC108728 AK026454 AF212240 AF237908 AF253977 AF261136 AF354930 AK300725 NM_022349 NM_152851	-10624	-	AK304487 AK310142 NM_000139 D10583 BC074800 BC074843 AB590499 JF411082	-105087	+	NM_001243266 NM_024021 NM_148975 AK292089 AK075081 TSC_hg19_v1_chr11_+_60048138 BC020648 CU676600 DQ891395 DQ894573 AB022821 AK314033 AB013102	86819	+	BC101783 AF333758 AF354931 BC069322 NM_139249 GQ129453 GQ129454 AF354933 BC034588 AF354932	141108	+	AK075106 NM_021201 NM_206938 NM_206939 NM_206940 AK297027 TSC_hg19_v1_chr11_+_60146004 BC043485 AF309653 AK309884	184713	+	AK291870|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001247999|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK301387|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AB013104|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF350502|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF350503|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF142409|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC022854|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC108728|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK026454|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF212240|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF237908|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF253977|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF261136|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF354930|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK300725|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_022349|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152851|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK304487|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##AK310142|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##NM_000139|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##D10583|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##BC074800|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##BC074843|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##JF411082|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##NM_001243266|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_024021|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_148975|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK292089|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK075081|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC020648|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ891395|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ894573|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB022821|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK314033|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB013102|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC101783|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF333758|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354931|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC069322|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_139249|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129453|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129454|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354933|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC034588|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354932|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AK075106|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_021201|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206938|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206939|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206940|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK297027|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF309653|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK309884|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7	0.410407	CTCF.p2:-24:0.410
chr10	112066066	112066193	reg1011746.p1	10.646	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-1429	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-1536	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-80308	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	191622	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	261363	+	AF067163 TSC_hg19_v1_chr10_+_112344155	277986	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.702557	CTCF.p2:-6:0.703
chr6	147021335	147021478	reg1012448.p1	10.646	+	AK097570 NM_024694 AL832192	-101269	+	TSC_hg19_v1_chr6_+_146864968 AK312202 U71127 AB529170 CU677203 DQ892882 DQ896131 AF498958 BT020016 U59878	-156398	+	BC015061 NM_006834 TSC_hg19_v1_chr6_+_146864864	-156537	+	TSC_hg19_v1_chr6_+_147524880 BC043645	503468	+	NM_001127715 NM_139244 AL834152 BC107737 BC113382 BC113408	504150	+	TSC_hg19_v1_chr6_+_147527118 AK128121	505704	+	AK097570|C6orf103|79747|chromosome 6 open reading frame 103##NM_024694|C6orf103|79747|chromosome 6 open reading frame 103##AL832192|C6orf103|79747|chromosome 6 open reading frame 103##AK312202|RAB32|10981|RAB32, member RAS oncogene family##U71127|RAB32|10981|RAB32, member RAS oncogene family##DQ892882|RAB32|10981|RAB32, member RAS oncogene family##DQ896131|RAB32|10981|RAB32, member RAS oncogene family##AF498958|RAB32|10981|RAB32, member RAS oncogene family##BT020016|RAB32|10981|RAB32, member RAS oncogene family##U59878|RAB32|10981|RAB32, member RAS oncogene family##BC015061|RAB32|10981|RAB32, member RAS oncogene family##NM_006834|RAB32|10981|RAB32, member RAS oncogene family##BC043645|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001127715|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_139244|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AL834152|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC107737|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113382|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113408|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AK128121|STXBP5|134957|syntaxin binding protein 5 (tomosyn)	0.997346	CTCF.p2:17:0.997
chrX	31055131	31055253	reg1010639.p1	10.646	+	TSC_hg19_v1_chrX_-_30907408 AK297274 NM_152787	-147733	-	TSC_hg19_v1_chrX_+_30671612 L13943 AK294938 AK294304 BX647604 AK308238 BC037549 CU688226 DQ891580 DQ894773	-383564	+	TSC_hg19_v1_chrX_+_30671539 AK313215	-383650	+	BC069538 BC100768 BC100769 BC100770 BC069069 AF285592 NM_031894	34971	-	CU688550 M92650 TSC_hg19_v1_chrX_-_31285072 BC070078 NM_004015 NM_004016 NM_004017 NM_004018 NM_004019 S42206 BC094758 AK299936 BC028720 S38776	229842	-	NM_004014 S62617	471222	-	AK297274|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##NM_152787|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##L13943|GK|2710|glycerol kinase##AK294938|GK|2710|glycerol kinase##AK294304|GK|2710|glycerol kinase##BX647604|GK|2710|glycerol kinase##AK308238|GK|2710|glycerol kinase##BC037549|GK|2710|glycerol kinase##DQ891580|GK|2710|glycerol kinase##DQ894773|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase##BC069538|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100768|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100769|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100770|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC069069|FTHL17|53940|ferritin, heavy polypeptide-like 17##AF285592|FTHL17|53940|ferritin, heavy polypeptide-like 17##NM_031894|FTHL17|53940|ferritin, heavy polypeptide-like 17##M92650|DMD|1756|dystrophin##BC070078|DMD|1756|dystrophin##NM_004015|DMD|1756|dystrophin##NM_004016|DMD|1756|dystrophin##NM_004017|DMD|1756|dystrophin##NM_004018|DMD|1756|dystrophin##NM_004019|DMD|1756|dystrophin##S42206|DMD|1756|dystrophin##BC094758|DMD|1756|dystrophin##AK299936|DMD|1756|dystrophin##BC028720|DMD|1756|dystrophin##S38776|DMD|1756|dystrophin##NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin	0.071009	
chr5	10864034	10864179	reg1011288.p1	10.645	+	TSC_hg19_v1_chr5_-_10761361 NM_004394	-102707	-	TSC_hg19_v1_chr5_-_10761341 BC002726	-102764	-	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	-102847	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	1039930	-	TSC_hg19_v1_chr5_-_11904184 AK296232	1040078	-	AX800026 AY045575 NM_001369	3080482	-	NM_004394|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5	0.99978	CTCF.p2:-22:1.000
chr7	152404124	152404259	reg1007934.p2	10.645	+	AB590731 CU692064 TSC_hg19_v1_chr7_-_152373227 BC042137 AK313607 Y08837 AF035587 NM_005431	-30983	-	TSC_hg19_v1_chr7_+_152161285 BC036622	-242952	+	TSC_hg19_v1_chr7_-_152133074 NM_170606	-271110	-	TSC_hg19_v1_chr7_+_152456872 NM_001040135 NM_020445 AK315534 BC008682 AK294292 AK316078 AF086920 BC015207 AF023453 CU677239 CU679037 DQ894754 EU176295	52702	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	1180209	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	1345567	+	BC042137|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AK313607|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##Y08837|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AF035587|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##NM_005431|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##BC036622|LOC100128822|100128822|uncharacterized LOC100128822##NM_170606|MLL3|58508|myeloid/lymphoid or mixed-lineage leukemia 3##NM_001040135|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##NM_020445|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK315534|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC008682|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK294292|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK316078|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF086920|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC015207|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF023453|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##DQ894754|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##EU176295|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6	0.677224	CTCF.p2:18:0.677
chr8	120276330	120276455	reg1010253.p1	10.644	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	-55753	+	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	-196923	+	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	-312172	-	NM_002514 AK294289 AK312355 TSC_hg19_v1_chr8_+_120428685 AY082381 X96584 BC015028 CU677181 AB463923 DQ891179 DQ894361 CR457432	152269	+	EU131011 DQ891628 DQ894819 D45421 L35594 AK315253 BC034961 TSC_hg19_v1_chr8_-_120651080 NM_001040092 NM_001130863 NM_006209	374670	-	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	568685	-	BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002514|NOV|4856|nephroblastoma overexpressed gene##AK294289|NOV|4856|nephroblastoma overexpressed gene##AK312355|NOV|4856|nephroblastoma overexpressed gene##AY082381|NOV|4856|nephroblastoma overexpressed gene##X96584|NOV|4856|nephroblastoma overexpressed gene##BC015028|NOV|4856|nephroblastoma overexpressed gene##DQ891179|NOV|4856|nephroblastoma overexpressed gene##DQ894361|NOV|4856|nephroblastoma overexpressed gene##CR457432|NOV|4856|nephroblastoma overexpressed gene##EU131011|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ891628|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ894819|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##D45421|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##L35594|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##AK315253|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC034961|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001040092|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001130863|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_006209|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa	0.970134	CTCF.p2:-19:0.970
chr3	98536437	98536584	reg1011154.p1	10.643	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-84923	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-85265	+	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	-224091	-	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	83982	-	AK311449 NM_001850 NM_020351 AF170702 BC013581	820940	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	1000235	+	AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26	0.991119	CTCF.p2:-13:0.991
chr8	82692868	82692982	reg1007977.p1	10.643	+	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-48166	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-59399	-	AY825924 NM_001010893 BC136625 BC136631	-85679	-	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	61548	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	2402534	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	2402618	+	BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##AY825924|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##NM_001010893|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136625|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136631|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like	0.75037	CTCF.p2:-11:0.750
chr2	95745859	95745939	reg1006201.p1	10.642	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	-54417	+	AK097438 BC021716 NM_144705 AK296678 CU692394	-208649	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3897896	-	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	41643	-	AB049940 TSC_hg19_v1_chr2_-_95787749 BC014172 NM_031902	41813	-	AK027363 NM_032788	79363	-	BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5##AB049940|MRPS5|64969|mitochondrial ribosomal protein S5##BC014172|MRPS5|64969|mitochondrial ribosomal protein S5##NM_031902|MRPS5|64969|mitochondrial ribosomal protein S5##AK027363|ZNF514|84874|zinc finger protein 514##NM_032788|ZNF514|84874|zinc finger protein 514	0.990474	CTCF.p2:16:0.990
chr18	3151571	3151671	reg1007890.p1	10.641	+	BC152448 D87436 NM_014646	-139677	-	AB026706 TSC_hg19_v1_chr18_+_2907037	-244620	+	TSC_hg19_v1_chr18_+_2847006 AF270513 NM_032048 BC032231 BC136541	-304590	+	BC116183 BC116184 TSC_hg19_v1_chr18_-_3219875	68239	-	TSC_hg19_v1_chr18_-_3219987 AJ621424 AK125322 NM_003803 NM_019856	68424	-	BC031972 NM_006471	95906	+	BC152448|LPIN2|9663|lipin 2##D87436|LPIN2|9663|lipin 2##NM_014646|LPIN2|9663|lipin 2##AB026706|EMILIN2|84034|elastin microfibril interfacer 2##AF270513|EMILIN2|84034|elastin microfibril interfacer 2##NM_032048|EMILIN2|84034|elastin microfibril interfacer 2##BC032231|EMILIN2|84034|elastin microfibril interfacer 2##BC136541|EMILIN2|84034|elastin microfibril interfacer 2##BC116183|MYOM1|8736|myomesin 1, 185kDa##BC116184|MYOM1|8736|myomesin 1, 185kDa##AJ621424|MYOM1|8736|myomesin 1, 185kDa##AK125322|MYOM1|8736|myomesin 1, 185kDa##NM_003803|MYOM1|8736|myomesin 1, 185kDa##NM_019856|MYOM1|8736|myomesin 1, 185kDa##BC031972|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric##NM_006471|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric	0.890382	CTCF.p2:-25:0.890
chr3	62174629	62174761	reg1010014.p1	10.641	+	AB055764 TSC_hg19_v1_chr3_-_61728812	-445884	-	L09247 AB385117 TSC_hg19_v1_chr3_+_61548071	-626719	+	BC047734 TSC_hg19_v1_chr3_+_61547294	-627409	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	130011	+	BC017772 NM_020685	130700	+	AK290464 NM_018008	184494	-	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2	0.975329	CTCF.p2:8:0.975
chr19	10044903	10045045	reg1009481.p2	10.640	+	BC031971 TSC_hg19_v1_chr19_+_9946188	-98810	+	NM_006221 TSC_hg19_v1_chr19_+_9946010 AK097558 AK291074 BC002899 U49070 AF086512 AB385559 BT019331 CR407654 CU678280 DQ892978 DQ896226	-99023	+	TSC_hg19_v1_chr19_+_9938597 AK309258 AF313915 BC007053 BC110839	-106361	+	TSC_hg19_v1_chr19_-_10047187 CU679906 DQ891083 DQ894265 AF131839 BC011361 NM_058164	2150	-	TSC_hg19_v1_chr19_-_10121181 AF177941 NM_015719	76169	-	DQ426888 AF229845 NM_015725	78918	+	BC031971|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##NM_006221|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK097558|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK291074|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##BC002899|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##U49070|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AF086512|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##BT019331|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##CR407654|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##DQ892978|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##DQ896226|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK309258|UBL5|59286|ubiquitin-like 5##AF313915|UBL5|59286|ubiquitin-like 5##BC007053|UBL5|59286|ubiquitin-like 5##BC110839|UBL5|59286|ubiquitin-like 5##DQ891083|OLFM2|93145|olfactomedin 2##DQ894265|OLFM2|93145|olfactomedin 2##AF131839|OLFM2|93145|olfactomedin 2##BC011361|OLFM2|93145|olfactomedin 2##NM_058164|OLFM2|93145|olfactomedin 2##AF177941|COL5A3|50509|collagen, type V, alpha 3##NM_015719|COL5A3|50509|collagen, type V, alpha 3##AF229845|RDH8|50700|retinol dehydrogenase 8 (all-trans)##NM_015725|RDH8|50700|retinol dehydrogenase 8 (all-trans)	0.254921	CTCF.p2:-24:0.255
chr10	125262643	125262751	reg1009425.p1	10.639	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-348341	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-348751	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-348799	+	AJ505757 NM_153442 BC112011 BC113462	163180	+	BC137492 BC146862 AY358565 NM_198148	388799	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	589202	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.023678	
chr12	9904021	9904158	reg1006012.p2	10.639	+	AF518873 BC093857 BC093859 NM_001253748 NM_001253750 NM_172004	-18213	-	BC063128 NM_001197318 NM_013269 AK310150 NM_001004419 AK310554 AK313554 BC019883 AF133299 AF285087 CU676474 FN813349 FN813350 FN813351 NM_001197317 NM_001197319	-81822	+	TSC_hg19_v1_chr12_+_9800760 AK096274	-103193	+	AY238518 CU675505 DQ893175 DQ896474 L07555 AK291869 AK303174 AK303383 BC007037 NM_001781 Z22576	9366	-	AF175206 AF175207 AF267244 AF267245 NM_016523 AJ305370 BC096734 BC098166 BC098257 BC098354	76007	+	X96719 AY142147 AB015628 BC005254 AK311232 TSC_hg19_v1_chr12_-_10021954 AK313916 AK307334	117869	-	AF518873|CLECL1|160365|C-type lectin-like 1##BC093857|CLECL1|160365|C-type lectin-like 1##BC093859|CLECL1|160365|C-type lectin-like 1##NM_001253748|CLECL1|160365|C-type lectin-like 1##NM_001253750|CLECL1|160365|C-type lectin-like 1##NM_172004|CLECL1|160365|C-type lectin-like 1##BC063128|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D##NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D##AK310150|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D##AK310554|CLEC2D|29121|C-type lectin domain family 2, member D##AK313554|CLEC2D|29121|C-type lectin domain family 2, member D##BC019883|CLEC2D|29121|C-type lectin domain family 2, member D##AF133299|CLEC2D|29121|C-type lectin domain family 2, member D##AF285087|CLEC2D|29121|C-type lectin domain family 2, member D##FN813349|CLEC2D|29121|C-type lectin domain family 2, member D##FN813350|CLEC2D|29121|C-type lectin domain family 2, member D##FN813351|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D##AK096274|LOC374443|374443|CLR pseudogene##AY238518|CD69|969|CD69 molecule##DQ893175|CD69|969|CD69 molecule##DQ896474|CD69|969|CD69 molecule##L07555|CD69|969|CD69 molecule##AK291869|CD69|969|CD69 molecule##AK303174|CD69|969|CD69 molecule##AK303383|CD69|969|CD69 molecule##BC007037|CD69|969|CD69 molecule##NM_001781|CD69|969|CD69 molecule##Z22576|CD69|969|CD69 molecule##AF175206|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF175207|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267244|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267245|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##NM_016523|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AJ305370|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC096734|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098166|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098257|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098354|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##X96719|CLEC2B|9976|C-type lectin domain family 2, member B##AY142147|CLEC2B|9976|C-type lectin domain family 2, member B##AB015628|CLEC2B|9976|C-type lectin domain family 2, member B##BC005254|CLEC2B|9976|C-type lectin domain family 2, member B##AK311232|CLEC2B|9976|C-type lectin domain family 2, member B##AK313916|CLEC2B|9976|C-type lectin domain family 2, member B##AK307334|CLEC2B|9976|C-type lectin domain family 2, member B	0.0	
chr13	34062094	34062240	reg1012861.p1	10.639	+	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	-137399	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	-202300	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-282003	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	188768	-	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	330060	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	330117	+	AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa	0.97222	CTCF.p2:19:0.972
chr17	25563862	25563991	reg1011235.p1	10.639	+	NM_001190452	-3541490	+	TSC_hg19_v1_chr17_-_21454933 AK056436 BC132738 BC136630 BC019938 BC010612 BC052777 BC053952 NM_001113434	-4109003	-	FJ434338 NM_001194958	-4255479	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	57196	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	57355	+	BC035488 BC042106 NM_014238	235103	+	NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##AK056436|C17orf51|339263|chromosome 17 open reading frame 51##BC132738|C17orf51|339263|chromosome 17 open reading frame 51##BC136630|C17orf51|339263|chromosome 17 open reading frame 51##BC019938|C17orf51|339263|chromosome 17 open reading frame 51##BC010612|C17orf51|339263|chromosome 17 open reading frame 51##BC052777|C17orf51|339263|chromosome 17 open reading frame 51##BC053952|C17orf51|339263|chromosome 17 open reading frame 51##NM_001113434|C17orf51|339263|chromosome 17 open reading frame 51##FJ434338|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##NM_001194958|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1	0.948479	CTCF.p2:-7:0.948
chr20	54975202	54975342	reg1012187.p1	10.639	+	TSC_hg19_v1_chr20_+_54967709 AK293182 AK312774 NM_001033522 BC001011 BC007425	-7555	+	TSC_hg19_v1_chr20_+_54967593 NM_001324 L02547	-7675	+	TSC_hg19_v1_chr20_+_54967443 NM_001033521 AK307144	-7848	+	AJ276678 NM_001164116 AX721200 AK308057 NM_001164114 NM_001164115 NM_020356 AK027760 BC027951 AK314653 AK295613	12035	+	NM_016407 TSC_hg19_v1_chr20_+_55043664	68387	+	TSC_hg19_v1_chr20_+_55043682 AF161513 AK314563	68412	+	AK293182|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##AK312774|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##NM_001033522|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##BC001011|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##BC007425|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##NM_001324|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##L02547|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##NM_001033521|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##AJ276678|CASS4|57091|Cas scaffolding protein family member 4##NM_001164116|CASS4|57091|Cas scaffolding protein family member 4##AK308057|CASS4|57091|Cas scaffolding protein family member 4##NM_001164114|CASS4|57091|Cas scaffolding protein family member 4##NM_001164115|CASS4|57091|Cas scaffolding protein family member 4##NM_020356|CASS4|57091|Cas scaffolding protein family member 4##AK027760|CASS4|57091|Cas scaffolding protein family member 4##BC027951|CASS4|57091|Cas scaffolding protein family member 4##AK314653|CASS4|57091|Cas scaffolding protein family member 4##AK295613|CASS4|57091|Cas scaffolding protein family member 4##NM_016407|C20orf43|51507|chromosome 20 open reading frame 43##AF161513|C20orf43|51507|chromosome 20 open reading frame 43##AK314563|C20orf43|51507|chromosome 20 open reading frame 43	0.995131	CTCF.p2:-2:0.995
chr6	41651449	41651560	reg1009747.p2	10.639	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	-45282	+	TSC_hg19_v1_chr6_+_41514342 BC052803	-137167	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	-137345	+	AJ608793 AJ608794 AJ608792 TSC_hg19_v1_chr6_-_41673723	22197	-	TSC_hg19_v1_chr6_-_41702787 AJ608787 BC032448 NM_007162	51261	-	M33782 TSC_hg19_v1_chr6_-_41703347	51842	-	NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor##BC052803|FOXP4|116113|forkhead box P4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##AJ608793|TFEB|7942|transcription factor EB##AJ608794|TFEB|7942|transcription factor EB##AJ608792|TFEB|7942|transcription factor EB##AJ608787|TFEB|7942|transcription factor EB##BC032448|TFEB|7942|transcription factor EB##NM_007162|TFEB|7942|transcription factor EB##M33782|TFEB|7942|transcription factor EB	0.996502	CTCF.p2:-5:0.997
chr7	66949359	66949467	reg1010362.p1	10.639	+	TSC_hg19_v1_chr7_+_66767656 BC026058	-181756	+	TSC_hg19_v1_chr7_+_66767642 AK307290	-181765	+	TSC_hg19_v1_chr7_+_66767639 AK023257 AK308931	-181805	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	2114423	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	2114916	+	TSC_hg19_v1_chr7_+_69064580 BC011643	2115175	+	BC026058|STAG3L4|64940|stromal antigen 3-like 4##AK307290|STAG3L4|64940|stromal antigen 3-like 4##AK023257|STAG3L4|64940|stromal antigen 3-like 4##AK308931|STAG3L4|64940|stromal antigen 3-like 4##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2	0.956965	CTCF.p2:-6:0.946
chr15	78469841	78469965	reg1011355.p1	10.638	+	TSC_hg19_v1_chr15_+_78441739 U07681 AB529210 CU692430 DQ892774 DQ893529 DQ896022	-28149	+	TSC_hg19_v1_chr15_+_78441734 AK222973	-28169	+	TSC_hg19_v1_chr15_+_78441718 AK299970 AK096721 AK296002 BC036227 NM_005530 AK315963 CR749548 BC021967 AK316051	-28198	+	DQ896428 EU176436 CU679287 BC009289 AB014531 AK294202 AK295269 AF179481 AK054882 AK299597 AK314508 NM_001199377 NM_015162	57041	-	TSC_hg19_v1_chr15_+_78556511 BC021720 NM_018602 AK098079 BX648710	86641	+	TSC_hg19_v1_chr15_+_78556901 AK096616 NM_001130182	87041	+	U07681|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ892774|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ893529|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ896022|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK222973|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK299970|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK296002|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC036227|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##NM_005530|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK315963|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##CR749548|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC021967|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK316051|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ896428|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##EU176436|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##BC009289|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK294202|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK295269|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AF179481|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK054882|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK299597|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK314508|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##NM_001199377|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##NM_015162|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##BC021720|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_018602|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##AK098079|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##BX648710|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##AK096616|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_001130182|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4	0.035603	
chr20	33357583	33357742	reg1010904.p1	10.637	+	AL122050 TSC_hg19_v1_chr20_+_33299806	-57869	+	AK027153 AK025412 TSC_hg19_v1_chr20_+_33299500	-58252	+	TSC_hg19_v1_chr20_+_33292147 AY422170 NM_021202 AJ297792 AK292443 BC035639	-65459	+	TSC_hg19_v1_chr20_-_33413434 BC069829 BC035676 NM_001242539 NM_014071 BC047886	55752	-	TSC_hg19_v1_chr20_-_33460644 AY138815 BC040030 AK124788 AK098355 BC101371 BC141843 BC101370 BC101372 AK299494 BC033745 NM_178026	102963	-	NM_001242393 TSC_hg19_v1_chr20_+_33462793 AK000162	105140	+	AL122050|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AK027153|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AK025412|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AY422170|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##NM_021202|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AJ297792|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AK292443|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##BC035639|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##BC069829|NCOA6|23054|nuclear receptor coactivator 6##BC035676|NCOA6|23054|nuclear receptor coactivator 6##NM_001242539|NCOA6|23054|nuclear receptor coactivator 6##NM_014071|NCOA6|23054|nuclear receptor coactivator 6##BC047886|NCOA6|23054|nuclear receptor coactivator 6##AY138815|GGT7|2686|gamma-glutamyltransferase 7##BC040030|GGT7|2686|gamma-glutamyltransferase 7##AK124788|GGT7|2686|gamma-glutamyltransferase 7##BC101371|GGT7|2686|gamma-glutamyltransferase 7##BC141843|GGT7|2686|gamma-glutamyltransferase 7##BC101370|GGT7|2686|gamma-glutamyltransferase 7##BC101372|GGT7|2686|gamma-glutamyltransferase 7##AK299494|GGT7|2686|gamma-glutamyltransferase 7##BC033745|GGT7|2686|gamma-glutamyltransferase 7##NM_178026|GGT7|2686|gamma-glutamyltransferase 7##NM_001242393|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK000162|ACSS2|55902|acyl-CoA synthetase short-chain family member 2	0.942125	CTCF.p2:15:0.942
chr2	138224974	138225089	reg1011443.p1	10.637	+	NM_001080427	-476570	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-701915	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-1349355	-	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	496903	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	1034362	+	TSC_hg19_v1_chr2_+_139259500 AK021919	1034459	+	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like	0.346434	CTCF.p2:-1:0.346
chr6	84224718	84224840	reg1009939.p2	10.637	+	TSC_hg19_v1_chr6_+_84222252 AY358661 BC037170 AK291928	-2499	+	NM_001170423 NM_153362 TSC_hg19_v1_chr6_+_84222226	-2569	+	TSC_hg19_v1_chr6_-_84140899 NM_002395	-83875	-	TSC_hg19_v1_chr6_-_84418505 AK294898	193720	-	TSC_hg19_v1_chr6_-_84418819 AB014556 AK289582 NM_001242792	193998	-	BC044579 TSC_hg19_v1_chr6_-_84419072 CR749348	194276	-	AY358661|PRSS35|167681|protease, serine, 35##BC037170|PRSS35|167681|protease, serine, 35##AK291928|PRSS35|167681|protease, serine, 35##NM_001170423|PRSS35|167681|protease, serine, 35##NM_153362|PRSS35|167681|protease, serine, 35##NM_002395|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK294898|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##AB014556|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##AK289582|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##NM_001242792|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##BC044579|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##CR749348|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)	0.988322	CTCF.p2:1:0.988
chr9	7536452	7536585	reg1011857.p1	10.637	+	TSC_hg19_v1_chr9_+_6757984 AB018323 AK304095 AK314355 AB037901 BC008296 AK303651 AK304032 BC104859 BC104861 BC143571	-778479	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	-778851	+	AK310439 NM_001146696	-815656	+	AL137489 TSC_hg19_v1_chr9_-_7799779 BC009510 AK308643 AK128876 AK292632 NM_033428	263197	-	TSC_hg19_v1_chr9_+_8713275 AY779046	1176774	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	1197401	-	AB018323|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304095|KDM4C|23081|lysine (K)-specific demethylase 4C##AK314355|KDM4C|23081|lysine (K)-specific demethylase 4C##AB037901|KDM4C|23081|lysine (K)-specific demethylase 4C##BC008296|KDM4C|23081|lysine (K)-specific demethylase 4C##AK303651|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304032|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104859|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104861|KDM4C|23081|lysine (K)-specific demethylase 4C##BC143571|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##AL137489|C9orf123|90871|chromosome 9 open reading frame 123##BC009510|C9orf123|90871|chromosome 9 open reading frame 123##AK292632|C9orf123|90871|chromosome 9 open reading frame 123##NM_033428|C9orf123|90871|chromosome 9 open reading frame 123##AY779046|RPL18A|6142|ribosomal protein L18a##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	0.980269	CTCF.p2:14:0.980
chr9	75697073	75697193	reg1009662.p1	10.637	+	NM_000689	-128901	-	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	-129188	-	AF417578 NM_138691	-560417	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	69645	+	TSC_hg19_v1_chr9_+_75766797 BC001275	69670	+	NM_006914 BC051830 Y08639	1415141	+	NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##BC001275|ANXA1|301|annexin A1##NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B	0.980588	CTCF.p2:-1:0.981
chr14	100413338	100413450	reg1006979.p2	10.636	+	TSC_hg19_v1_chr14_+_100259749 AK126980 BX247979 NM_001008707 NM_004434 BC033043 U97018 BC032541 CU689414 DQ891556 DQ894743	-153690	+	AK299812 TSC_hg19_v1_chr14_+_100240040	-173403	+	TSC_hg19_v1_chr14_+_100204058 AK307925	-209344	+	TSC_hg19_v1_chr14_+_100438137 AK289720 BC023997	24760	+	AK295919 TSC_hg19_v1_chr14_+_100485800	72365	+	TSC_hg19_v1_chr14_+_100531758 NM_016337 AK301379	118358	+	AK126980|EML1|2009|echinoderm microtubule associated protein like 1##BX247979|EML1|2009|echinoderm microtubule associated protein like 1##NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1##NM_004434|EML1|2009|echinoderm microtubule associated protein like 1##BC033043|EML1|2009|echinoderm microtubule associated protein like 1##U97018|EML1|2009|echinoderm microtubule associated protein like 1##BC032541|EML1|2009|echinoderm microtubule associated protein like 1##DQ891556|EML1|2009|echinoderm microtubule associated protein like 1##DQ894743|EML1|2009|echinoderm microtubule associated protein like 1##AK299812|EML1|2009|echinoderm microtubule associated protein like 1##AK307925|EML1|2009|echinoderm microtubule associated protein like 1##AK289720|EVL|51466|Enah/Vasp-like##BC023997|EVL|51466|Enah/Vasp-like##AK295919|EVL|51466|Enah/Vasp-like##NM_016337|EVL|51466|Enah/Vasp-like##AK301379|EVL|51466|Enah/Vasp-like	0.998962	CTCF.p2:5:0.987
chr2	25389036	25389153	reg1009883.p1	10.636	+	TSC_hg19_v1_chr2_+_25264954 NM_014971 AB023170	-124117	+	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	-194227	-	AK294726 TSC_hg19_v1_chr2_-_25194607	-194549	-	NM_000939 NM_001035256	2464	-	TSC_hg19_v1_chr2_-_25466801 BC018214	77714	-	TSC_hg19_v1_chr2_-_25467080 BC023612	78041	-	NM_014971|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AB023170|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AK294726|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_000939|POMC|5443|proopiomelanocortin##NM_001035256|POMC|5443|proopiomelanocortin##BC018214|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.996553	CTCF.p2:3:0.874
chr2	9939909	9940039	reg1012134.p1	10.635	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-168849	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	-168925	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	-169361	-	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	43646	+	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	151876	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	243818	+	NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11	0.999572	CTCF.p2:9:1.000
chr13	47125740	47125863	reg1009535.p2	10.634	+	AK125950 TSC_hg19_v1_chr13_-_47012386	-113441	-	NM_025113	-164167	-	TSC_hg19_v1_chr13_-_46961379 AK025215 AK293034	-164417	-	NM_001164211 NM_001164213 NM_015116 TSC_hg19_v1_chr13_+_47127304 AY050631 AY050632 AK309937	1501	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	1522	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	1619	+	AK125950|KIAA0226L|80183|KIAA0226-like##NM_025113|KIAA0226L|80183|KIAA0226-like##AK025215|KIAA0226L|80183|KIAA0226-like##AK293034|KIAA0226L|80183|KIAA0226-like##NM_001164211|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##NM_001164213|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##NM_015116|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AY050631|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AY050632|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK309937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1	0.848353	CTCF.p2:-5:0.848
chr3	41935600	41935751	reg1009109.p1	10.634	+	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	-694651	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	-694726	+	TSC_hg19_v1_chr3_+_40566471 BC101619 BC113415 CR749268	-1369175	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	67884	-	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	197158	+	TSC_hg19_v1_chr3_+_42190749 AK294221	255073	+	AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC101619|ZNF621|285268|zinc finger protein 621##BC113415|ZNF621|285268|zinc finger protein 621##CR749268|ZNF621|285268|zinc finger protein 621##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1	0.974806	CTCF.p2:0:0.975
chr11	29355870	29356000	reg1009882.p2	10.633	+	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-1224082	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-1226057	+	TSC_hg19_v1_chr11_-_28129704 BC026090 NM_031217	-1226212	-	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	682596	-	NM_000510 NM_001018080	896627	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	988717	+	BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##BC026090|KIF18A|81930|kinesin family member 18A##NM_031217|KIF18A|81930|kinesin family member 18A##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46	0.924476	CTCF.p2:20:0.924
chr18	34923385	34923518	reg1011695.p1	10.633	+	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-514331	-	TSC_hg19_v1_chr18_+_34409093 AK304230 AL832625 NM_020776 BC038772 AK292288 BX648875 BC045585 AB587550 AM393103 AM393380 BC146691	-514368	+	AB073382 TSC_hg19_v1_chr18_-_34408948	-514499	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	222245	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	222548	-	TSC_hg19_v1_chr18_-_36915657 D28405	1992205	-	BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK304230|KIAA1328|57536|KIAA1328##AL832625|KIAA1328|57536|KIAA1328##NM_020776|KIAA1328|57536|KIAA1328##AK292288|KIAA1328|57536|KIAA1328##BX648875|KIAA1328|57536|KIAA1328##BC045585|KIAA1328|57536|KIAA1328##AM393103|KIAA1328|57536|KIAA1328##AM393380|KIAA1328|57536|KIAA1328##BC146691|KIAA1328|57536|KIAA1328##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4	0.999551	CTCF.p2:-11:1.000
chr12	12234839	12234987	reg1008976.p1	10.632	+	AF281254 AF281255 NM_030766 NM_138722	-10512	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	-11030	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-431927	+	AK074543 TSC_hg19_v1_chr12_-_12291395	56471	-	BC117136 BC126405 BC143725 AF074264 NM_002336 TSC_hg19_v1_chr12_-_12419947	184929	-	AY358563 TSC_hg19_v1_chr12_-_12503210 AK023622 NM_018050 AK001160 BC032998	268259	-	AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6##BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6##BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6##BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6##AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6##NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6##AY358563|MANSC1|54682|MANSC domain containing 1##AK023622|MANSC1|54682|MANSC domain containing 1##NM_018050|MANSC1|54682|MANSC domain containing 1##AK001160|MANSC1|54682|MANSC domain containing 1##BC032998|MANSC1|54682|MANSC domain containing 1	0.175718	
chr1	90580236	90580357	reg1009729.p1	10.632	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	-119580	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-292732	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-292838	+	BC126439 BC126441 AY338397 NM_020063	602489	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	906742	-	TSC_hg19_v1_chr1_-_91487583 BC041138 AK291520	907267	-	NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644##BC041138|ZNF644|84146|zinc finger protein 644##AK291520|ZNF644|84146|zinc finger protein 644	0.980307	CTCF.p2:-13:0.980
chr3	13699461	13699594	reg1012306.p1	10.632	+	AK304827 NM_001165035	-89288	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	-108864	+	AK129883 NM_001004019 NM_001998 TSC_hg19_v1_chr3_+_13590624	-108902	+	BC008811 NM_004625	222090	-	TSC_hg19_v1_chr3_-_14166228 BC017082	466706	-	TSC_hg19_v1_chr3_-_14166250 BC033775	466723	-	AK304827|FBLN2|2199|fibulin 2##NM_001165035|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2##AK129883|FBLN2|2199|fibulin 2##NM_001004019|FBLN2|2199|fibulin 2##NM_001998|FBLN2|2199|fibulin 2##BC008811|WNT7A|7476|wingless-type MMTV integration site family, member 7A##NM_004625|WNT7A|7476|wingless-type MMTV integration site family, member 7A##BC017082|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##BC033775|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4	0.028847	
chr16	85279357	85279478	reg1008136.p1	10.631	+	BC093665 BC111944 AK126284 NM_198491	-133363	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-218047	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-234288	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	365604	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	367536	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	443125	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.985032	CTCF.p2:1:0.985
chr19	18057231	18057362	reg1009273.p2	10.630	+	BC013949 NM_138442	-11392	+	TSC_hg19_v1_chr19_+_18043824 NM_001136203	-13472	+	BX648217 NM_000453 U66088 D87920	-74466	+	NM_002248 U69883	4814	+	TSC_hg19_v1_chr19_+_18111932 NM_001025604 AK127940	54654	+	TSC_hg19_v1_chr19_+_18118978 AF193051 NM_015683 AK000689 AK128588 BC022516 AK314657 AB529119	61722	+	BC013949|CCDC124|115098|coiled-coil domain containing 124##NM_138442|CCDC124|115098|coiled-coil domain containing 124##NM_001136203|CCDC124|115098|coiled-coil domain containing 124##BX648217|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##NM_000453|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##U66088|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##D87920|SLC5A5|6528|solute carrier family 5 (sodium iodide symporter), member 5##NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##NM_001025604|ARRDC2|27106|arrestin domain containing 2##AK127940|ARRDC2|27106|arrestin domain containing 2##AF193051|ARRDC2|27106|arrestin domain containing 2##NM_015683|ARRDC2|27106|arrestin domain containing 2##AK000689|ARRDC2|27106|arrestin domain containing 2##AK128588|ARRDC2|27106|arrestin domain containing 2##BC022516|ARRDC2|27106|arrestin domain containing 2##AK314657|ARRDC2|27106|arrestin domain containing 2	1.005564	CTCF.p2:-6:0.993
chr2	102972126	102972262	reg1009352.p1	10.630	+	BC012580 BC030975 NM_003856 AK291578 AB029084	-18463	+	AB012701 NM_016232 AK313967 AK303389	-44203	+	AF284434 NM_003854 U49065 BC107064	-168746	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	6914	+	AK300026 AF077346 NM_003853	63006	+	CR627411 NM_001011552	117567	+	BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##AB012701|IL1RL1|9173|interleukin 1 receptor-like 1##NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1##AK313967|IL18R1|8809|interleukin 18 receptor 1##AK303389|IL1RL1|9173|interleukin 1 receptor-like 1##AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1##AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein##AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein##NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein##CR627411|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##NM_001011552|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4	0.819141	CTCF.p2:20:0.808
chr7	121635126	121635259	reg1004122.p2	10.630	+	TSC_hg19_v1_chr7_+_121513214 U88967	-121971	+	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	-122031	+	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	-598778	-	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	149097	-	AY726588 BC127714 BC127715 NM_001024613 NM_001160264 BC136684 BC144367 AK300742	309397	-	BC022038 AF447589 NM_139175 AK098524	704005	-	U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase##AY726588|FEZF1|389549|FEZ family zinc finger 1##BC127714|FEZF1|389549|FEZ family zinc finger 1##BC127715|FEZF1|389549|FEZ family zinc finger 1##NM_001024613|FEZF1|389549|FEZ family zinc finger 1##NM_001160264|FEZF1|389549|FEZ family zinc finger 1##BC136684|FEZF1|389549|FEZ family zinc finger 1##BC144367|FEZF1|389549|FEZ family zinc finger 1##AK300742|FEZF1|389549|FEZ family zinc finger 1##BC022038|RNF133|168433|ring finger protein 133##AF447589|RNF133|168433|ring finger protein 133##NM_139175|RNF133|168433|ring finger protein 133##AK098524|RNF133|168433|ring finger protein 133	0.894603	CTCF.p2:16:0.895
chr9	21111051	21111172	reg1009312.p1	10.630	+	AB451491 AB451323 AB451452 BC069314 BC096150 BC096151 BC096152 BC096153 V00547 AB587428 V00546 M25460 M28622 NM_002176	-33238	-	BC114215 TSC_hg19_v1_chr9_-_21031636 BX648779 NM_001010915	-79480	-	AK056522 AY139834 NM_017794	-452804	+	NM_002177	31032	-	CU686757 AB590744 BC101638 BC101640 BC069329 BC069372 BC069408 V00540 BC096699 M12350 M28586 NM_002175 X00145	55522	-	AB590745 HQ258102 HQ258746 BC074965 BC074966 BC113640 BC113642 NM_021068 M27318	76488	-	AB451323|IFNB1|3456|interferon, beta 1, fibroblast##AB451452|IFNB1|3456|interferon, beta 1, fibroblast##BC069314|IFNB1|3456|interferon, beta 1, fibroblast##BC096150|IFNB1|3456|interferon, beta 1, fibroblast##BC096151|IFNB1|3456|interferon, beta 1, fibroblast##BC096152|IFNB1|3456|interferon, beta 1, fibroblast##BC096153|IFNB1|3456|interferon, beta 1, fibroblast##V00547|IFNB1|3456|interferon, beta 1, fibroblast##V00546|IFNB1|3456|interferon, beta 1, fibroblast##M25460|IFNB1|3456|interferon, beta 1, fibroblast##M28622|IFNB1|3456|interferon, beta 1, fibroblast##NM_002176|IFNB1|3456|interferon, beta 1, fibroblast##BC114215|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##BX648779|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##NM_001010915|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797##NM_002177|IFNW1|3467|interferon, omega 1##BC101638|IFNA21|3452|interferon, alpha 21##BC101640|IFNA21|3452|interferon, alpha 21##BC069329|IFNA21|3452|interferon, alpha 21##BC069372|IFNA21|3452|interferon, alpha 21##BC069408|IFNA21|3452|interferon, alpha 21##V00540|IFNA21|3452|interferon, alpha 21##BC096699|IFNA21|3452|interferon, alpha 21##M12350|IFNA21|3452|interferon, alpha 21##M28586|IFNA21|3452|interferon, alpha 21##NM_002175|IFNA21|3452|interferon, alpha 21##X00145|IFNA21|3452|interferon, alpha 21##HQ258102|IFNA4|3441|interferon, alpha 4##HQ258746|IFNA4|3441|interferon, alpha 4##BC074965|IFNA4|3441|interferon, alpha 4##BC074966|IFNA4|3441|interferon, alpha 4##BC113640|IFNA4|3441|interferon, alpha 4##BC113642|IFNA4|3441|interferon, alpha 4##NM_021068|IFNA4|3441|interferon, alpha 4##M27318|IFNA4|3441|interferon, alpha 4	0.999648	CTCF.p2:31:1.000
chr9	26744513	26744627	reg1010706.p1	10.630	+	AK131322 NM_001004352	-677898	+	NM_001004125	-1065715	-	BC017510 TSC_hg19_v1_chr9_-_25678278 BC046919 AY168647 BC110824	-1066237	-	AB590748 CU687198 BC071953 TSC_hg19_v1_chr9_-_26892779 AK023719 BC014658 NM_001167575 NM_024828	148199	-	EU176453 EU176795 AB385043 TSC_hg19_v1_chr9_-_26947158 BC032551 AK022761	202534	-	TSC_hg19_v1_chr9_-_26947165 AK001642	202598	-	AK131322|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004352|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004125|TUSC1|286319|tumor suppressor candidate 1##BC017510|TUSC1|286319|tumor suppressor candidate 1##BC046919|TUSC1|286319|tumor suppressor candidate 1##AY168647|TUSC1|286319|tumor suppressor candidate 1##BC110824|TUSC1|286319|tumor suppressor candidate 1##BC071953|C9orf82|79886|chromosome 9 open reading frame 82##AK023719|C9orf82|79886|chromosome 9 open reading frame 82##BC014658|C9orf82|79886|chromosome 9 open reading frame 82##NM_001167575|C9orf82|79886|chromosome 9 open reading frame 82##NM_024828|C9orf82|79886|chromosome 9 open reading frame 82##EU176453|PLAA|9373|phospholipase A2-activating protein##EU176795|PLAA|9373|phospholipase A2-activating protein##BC032551|PLAA|9373|phospholipase A2-activating protein##AK022761|PLAA|9373|phospholipase A2-activating protein##AK001642|PLAA|9373|phospholipase A2-activating protein	0.979174	CTCF.p2:-4:0.979
chr14	105553207	105553334	reg1009970.p1	10.629	+	TSC_hg19_v1_chr14_-_105531768 AB465599 AB465600 AK292142 AK303654 AX775935 AX775841	-21497	-	TSC_hg19_v1_chr14_-_105531756 AF083955 AX775937 NM_013345 EU543705	-21522	-	TSC_hg19_v1_chr14_-_105487428 NM_017955 NM_145701	-65846	-	Y14330 AF003521 AF020201 TSC_hg19_v1_chr14_-_105634835 BC032053	81521	-	TSC_hg19_v1_chr14_-_105635114 AF029778 AF029779 NM_002226 NM_145159	81867	-	TSC_hg19_v1_chr14_-_105647650 AB087802 HQ257983 BC041584 AK128196 AK310449 NM_177533	94324	-	AB465599|GPR132|29933|G protein-coupled receptor 132##AB465600|GPR132|29933|G protein-coupled receptor 132##AK292142|GPR132|29933|G protein-coupled receptor 132##AK303654|GPR132|29933|G protein-coupled receptor 132##AX775935|GPR132|29933|G protein-coupled receptor 132##AX775841|GPR132|29933|G protein-coupled receptor 132##AF083955|GPR132|29933|G protein-coupled receptor 132##NM_013345|GPR132|29933|G protein-coupled receptor 132##EU543705|GPR132|29933|G protein-coupled receptor 132##NM_017955|CDCA4|55038|cell division cycle associated 4##NM_145701|CDCA4|55038|cell division cycle associated 4##Y14330|JAG2|3714|jagged 2##AF003521|JAG2|3714|jagged 2##AF020201|JAG2|3714|jagged 2##BC032053|JAG2|3714|jagged 2##AF029778|JAG2|3714|jagged 2##AF029779|JAG2|3714|jagged 2##NM_002226|JAG2|3714|jagged 2##NM_145159|JAG2|3714|jagged 2##AB087802|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##HQ257983|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##BC041584|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AK128196|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##NM_177533|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14	0.72687	CTCF.p2:2:0.708
chr4	100806352	100806475	reg1008413.p2	10.629	+	NM_014395 AF186022 AF163254 AF161551 AK301355 AF178987 BC012924 AB528911 DQ893576 DQ894665	-68388	+	TSC_hg19_v1_chr4_+_100495977 AK225328 BC062696 X59657 AK290793 BC125110 BC125111 X75500 X91148	-310406	+	AK302602 NM_000253	-321174	+	AF130115 TSC_hg19_v1_chr4_-_100815585 AK311755 BC110402 BC005340 AK223311 AF201947 BC026245	9162	-	TSC_hg19_v1_chr4_-_100815667 NM_001243736 NM_021970	9271	-	HQ257892 TSC_hg19_v1_chr4_-_100867740 AY358272 BX537609 AL833412 BC022248	61341	-	NM_014395|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF186022|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF163254|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF161551|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AK301355|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF178987|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##BC012924|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##DQ893576|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##DQ894665|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AK225328|MTTP|4547|microsomal triglyceride transfer protein##BC062696|MTTP|4547|microsomal triglyceride transfer protein##X59657|MTTP|4547|microsomal triglyceride transfer protein##AK290793|MTTP|4547|microsomal triglyceride transfer protein##BC125110|MTTP|4547|microsomal triglyceride transfer protein##BC125111|MTTP|4547|microsomal triglyceride transfer protein##X75500|MTTP|4547|microsomal triglyceride transfer protein##X91148|MTTP|4547|microsomal triglyceride transfer protein##AK302602|MTTP|4547|microsomal triglyceride transfer protein##NM_000253|MTTP|4547|microsomal triglyceride transfer protein##AF130115|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##AK311755|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC110402|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC005340|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##AK223311|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##AF201947|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC026245|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##NM_001243736|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##NM_021970|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##HQ257892|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##AY358272|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##BX537609|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##AL833412|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##BC022248|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14	0.943036	CTCF.p2:14:0.943
chr7	26130691	26130837	reg1011768.p1	10.629	+	AB040290 AF330057 AF440392 NM_022150	-862684	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-910893	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-965824	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	61169	+	TSC_hg19_v1_chr7_-_26232151 BX538099	101387	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	109577	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.277879	CTCF.p2:-8:0.278
chr9	120318641	120318773	reg1012203.p1	10.629	+	TSC_hg19_v1_chr9_-_120177336 BX649176	-141373	-	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	-141394	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	-869101	+	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	147757	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	147907	+	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	147980	+	BX649176|ASTN2|23245|astrotactin 2##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4	0.99809	CTCF.p2:-3:0.998
chr16	69157998	69158133	reg1011946.p1	10.628	+	AF234839 NM_005329	-16623	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	-17925	+	AK291400 NM_001199280	-18599	+	TSC_hg19_v1_chr16_-_69166063 NM_001040146	8031	-	TSC_hg19_v1_chr16_-_69166427 BC018700	8372	-	TSC_hg19_v1_chr16_-_69166474 AF525164 AK000407	8407	-	AF234839|HAS3|3038|hyaluronan synthase 3##NM_005329|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_001040146|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)##BC018700|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)##AF525164|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)##AK000407|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	0.997778	CTCF.p2:0:0.998
chr20	49187112	49187260	reg1008942.p2	10.628	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	-60181	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-60254	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-60267	+	AK056792 NM_080829	66239	-	TSC_hg19_v1_chr20_-_49308074 AK124347	120891	-	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	160883	+	BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	0.82807	CTCF.p2:17:0.828
chr5	149047225	149047362	reg1010666.p1	10.628	+	AK300559 AK316002 BC041325 NM_001001669	-86209	+	TSC_hg19_v1_chr5_-_148931006 NM_001025105 NM_001892	-116287	-	TSC_hg19_v1_chr5_-_148930950 AK294942	-116327	-	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	62534	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	62583	+	AK123614 NM_001172699	104209	+	AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##NM_001025105|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001892|CSNK1A1|1452|casein kinase 1, alpha 1##AK294942|CSNK1A1|1452|casein kinase 1, alpha 1##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	0.998873	CTCF.p2:-6:0.999
chr10	85907879	85907984	reg1010019.p1	10.627	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	-8674	+	DQ857894 NM_001165973	-2270489	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-2272849	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	23861	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	25628	+	AB593154 TSC_hg19_v1_chr10_+_85954408 AB593155 BC038799 NM_001171971 NM_033100 AB463200 AB053448	46522	+	NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99##AB593154|CDHR1|92211|cadherin-related family member 1##AB593155|CDHR1|92211|cadherin-related family member 1##BC038799|CDHR1|92211|cadherin-related family member 1##NM_001171971|CDHR1|92211|cadherin-related family member 1##NM_033100|CDHR1|92211|cadherin-related family member 1##AB053448|CDHR1|92211|cadherin-related family member 1	0.697801	CTCF.p2:23:0.698
chr5	169643393	169643497	reg1009174.p1	10.627	+	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	-110474	+	AK055998 NM_001129891	-235702	-	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-579145	+	BC030767 NM_001102609 BC092511	16551	+	BT007273 FN432830 DQ890681 DQ893863 AB527802 TSC_hg19_v1_chr5_-_169724688	81206	-	TSC_hg19_v1_chr5_-_169724734 BC016618 AK310369	81310	-	AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58##BT007273|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##FN432830|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ890681|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ893863|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	0.010388	
chr11	55710401	55710541	reg1012954.p1	10.626	+	BC069093 NM_006637	-6596	-	NM_001001960	-28414	-	NM_032681	-59699	+	AB529272 NM_001005491 BC136890 BC136891	25492	-	BC101242 BC101239 BC101241 NM_003697	51628	-	NM_001001921	87423	+	BC069093|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1##NM_006637|OR5I1|10798|olfactory receptor, family 5, subfamily I, member 1##NM_001001960|OR5W2|390148|olfactory receptor, family 5, subfamily W, member 2##NM_032681|SPRYD5|84767|SPRY domain containing 5##NM_001005491|OR10AG1|282770|olfactory receptor, family 10, subfamily AG, member 1##BC136890|OR10AG1|282770|olfactory receptor, family 10, subfamily AG, member 1##BC136891|OR10AG1|282770|olfactory receptor, family 10, subfamily AG, member 1##BC101242|OR5F1|338674|olfactory receptor, family 5, subfamily F, member 1##BC101239|OR5F1|338674|olfactory receptor, family 5, subfamily F, member 1##BC101241|OR5F1|338674|olfactory receptor, family 5, subfamily F, member 1##NM_003697|OR5F1|338674|olfactory receptor, family 5, subfamily F, member 1##NM_001001921|OR5AS1|219447|olfactory receptor, family 5, subfamily AS, member 1	0.936335	CTCF.p2:-9:0.936
chr12	47426485	47426604	reg1009703.p1	10.626	+	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	-206788	-	TSC_hg19_v1_chr12_-_46766619 NM_018976	-659941	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-660255	-	TSC_hg19_v1_chr12_+_47473404 BC072670	46853	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	47039	-	BC008360 NM_138371	183507	+	AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC008360|FAM113B|91523|family with sequence similarity 113, member B##NM_138371|FAM113B|91523|family with sequence similarity 113, member B	0.803072	CTCF.p2:-4:0.803
chr19	14797385	14797521	reg1008021.p2	10.626	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	-11776	-	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	-103539	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	-114604	-	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	3311	+	BC082991 AF114491 AK301458 AK222891 AK298700 TSC_hg19_v1_chr19_-_14887654	90185	-	TSC_hg19_v1_chr19_-_14887656 AK291776	90259	-	AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333##BC082991|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AF114491|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK301458|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK222891|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK298700|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK291776|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2	0.998923	CTCF.p2:4:0.999
chr19	47535594	47535709	reg1010179.p2	10.626	+	AB054002 NM_002517 U77968	-11440	+	TSC_hg19_v1_chr19_+_47523068 BC039016	-12575	+	AB051509 AF159851 BC131565 BC150257 NM_004491	-113719	+	AK000519 NM_017854 TSC_hg19_v1_chr19_-_47551883 BC002907	16245	-	AK125279 TSC_hg19_v1_chr19_-_47615487	79835	-	TSC_hg19_v1_chr19_-_47615825 AB384098	80172	-	AB054002|NPAS1|4861|neuronal PAS domain protein 1##NM_002517|NPAS1|4861|neuronal PAS domain protein 1##U77968|NPAS1|4861|neuronal PAS domain protein 1##BC039016|NPAS1|4861|neuronal PAS domain protein 1##AB051509|ARHGAP35|2909|Rho GTPase activating protein 35##AF159851|ARHGAP35|2909|Rho GTPase activating protein 35##BC131565|ARHGAP35|2909|Rho GTPase activating protein 35##BC150257|ARHGAP35|2909|Rho GTPase activating protein 35##NM_004491|ARHGAP35|2909|Rho GTPase activating protein 35##AK000519|TMEM160|54958|transmembrane protein 160##NM_017854|TMEM160|54958|transmembrane protein 160##BC002907|TMEM160|54958|transmembrane protein 160##AK125279|ZC3H4|23211|zinc finger CCCH-type containing 4	0.975883	CTCF.p2:1:0.976
chr2	80300301	80300426	reg1011803.p1	10.626	+	TSC_hg19_v1_chr2_+_79740175 AK295181	-560148	+	NM_001164883 NM_004389 BC052996 TSC_hg19_v1_chr2_+_79740147 BC040458	-560255	+	AK291973 AK311523 AK311523 AK311526 NM_138938 NM_002580 NM_138937	-913485	-	AB587576 AY182024 HQ257885 TSC_hg19_v1_chr2_-_80530981	230600	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	231162	-	TSC_hg19_v1_chr2_-_80531719 AK290512	231362	-	AK295181|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_001164883|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_004389|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC052996|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC040458|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##AK291973|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311526|REG3A|5068|regenerating islet-derived 3 alpha##NM_138938|REG3A|5068|regenerating islet-derived 3 alpha##NM_002580|REG3A|5068|regenerating islet-derived 3 alpha##NM_138937|REG3A|5068|regenerating islet-derived 3 alpha##AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##HQ257885|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	0.999449	CTCF.p2:3:0.999
chr5	36265662	36265765	reg1009503.p2	10.626	+	BC062567 NM_153013 AK304009	-23402	-	NM_001085411 TSC_hg19_v1_chr5_-_36241996	-23725	-	TSC_hg19_v1_chr5_-_36241813 BC045565	-23938	-	BC017951 AK058151 AK302947 TSC_hg19_v1_chr5_-_36302002 BC047660 NM_001161429 NM_145000	36291	-	NM_001166696 NM_004172	340743	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	341015	+	BC062567|NADKD1|133686|NAD kinase domain containing 1##NM_153013|NADKD1|133686|NAD kinase domain containing 1##AK304009|NADKD1|133686|NAD kinase domain containing 1##NM_001085411|NADKD1|133686|NAD kinase domain containing 1##BC045565|NADKD1|133686|NAD kinase domain containing 1##BC017951|RANBP3L|202151|RAN binding protein 3-like##AK058151|RANBP3L|202151|RAN binding protein 3-like##AK302947|RANBP3L|202151|RAN binding protein 3-like##BC047660|RANBP3L|202151|RAN binding protein 3-like##NM_001161429|RANBP3L|202151|RAN binding protein 3-like##NM_145000|RANBP3L|202151|RAN binding protein 3-like##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	1.273204	CTCF.p2:4:0.915	CTCF.p2:46:0.358
chr4	8269041	8269175	reg1006863.p1	10.625	+	TSC_hg19_v1_chr4_+_8201038 BC030283 AK074093 NM_018986 BC068094 AK074402 AK126165 BC131785	-68076	+	DQ413176 AJ748600 AJ748601 TSC_hg19_v1_chr4_-_8160541 BC122567 AK130044 AK094754 BC067214 NM_001130083 NM_001130084 NM_001130085 NM_001130086 NM_001130087 NM_001130088 NM_032432	-108574	-	TSC_hg19_v1_chr4_-_8129388 AK301060	-139723	-	TSC_hg19_v1_chr4_+_8271480 NM_053044 AY040094 BC034390 BC035717 AY280665 AY280666 AB528940 DQ891188 DQ894371	2467	+	TSC_hg19_v1_chr4_-_8430196 AK313242	161093	-	Y11411 BC017053 TSC_hg19_v1_chr4_-_8442447 AK225080 NM_001101667 NM_003501	173348	-	BC030283|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074093|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##NM_018986|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC068094|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074402|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK126165|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC131785|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##DQ413176|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748600|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748601|ABLIM2|84448|actin binding LIM protein family, member 2##BC122567|ABLIM2|84448|actin binding LIM protein family, member 2##AK130044|ABLIM2|84448|actin binding LIM protein family, member 2##AK094754|ABLIM2|84448|actin binding LIM protein family, member 2##BC067214|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130083|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130084|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130085|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130086|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130087|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130088|ABLIM2|84448|actin binding LIM protein family, member 2##NM_032432|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2##NM_053044|HTRA3|94031|HtrA serine peptidase 3##AY040094|HTRA3|94031|HtrA serine peptidase 3##BC034390|HTRA3|94031|HtrA serine peptidase 3##BC035717|HTRA3|94031|HtrA serine peptidase 3##AY280665|HTRA3|94031|HtrA serine peptidase 3##AY280666|HTRA3|94031|HtrA serine peptidase 3##DQ891188|HTRA3|94031|HtrA serine peptidase 3##DQ894371|HTRA3|94031|HtrA serine peptidase 3##AK313242|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##Y11411|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##BC017053|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK225080|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_001101667|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_003501|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl	0.405546	CTCF.p2:-21:0.406
chr17	47785685	47785817	reg1010028.p2	10.624	+	BX641166 TSC_hg19_v1_chr17_-_47785555	-201	-	TSC_hg19_v1_chr17_-_47785283 AK296073 D87989 NM_005827 BC011888 AK293563	-453	-	AK098056 CU680094 DQ893425 EU176812 TSC_hg19_v1_chr17_-_47785254	-558	-	AF123073 BC065199 TSC_hg19_v1_chr17_-_47841483	55728	-	NM_030802 BC037572 TSC_hg19_v1_chr17_-_47841551	55795	-	NM_001199155 NM_001199156 NM_001199157 NM_001199158 NM_007067 TSC_hg19_v1_chr17_+_47866042 AK293976 AK294014 AK023890 AK294052 AK294836 AF140360	80267	+	BX641166|SLC35B1|10237|solute carrier family 35, member B1##AK296073|SLC35B1|10237|solute carrier family 35, member B1##D87989|SLC35B1|10237|solute carrier family 35, member B1##NM_005827|SLC35B1|10237|solute carrier family 35, member B1##BC011888|SLC35B1|10237|solute carrier family 35, member B1##AK293563|SLC35B1|10237|solute carrier family 35, member B1##AK098056|SLC35B1|10237|solute carrier family 35, member B1##DQ893425|SLC35B1|10237|solute carrier family 35, member B1##EU176812|SLC35B1|10237|solute carrier family 35, member B1##AF123073|FAM117A|81558|family with sequence similarity 117, member A##BC065199|FAM117A|81558|family with sequence similarity 117, member A##NM_030802|FAM117A|81558|family with sequence similarity 117, member A##BC037572|FAM117A|81558|family with sequence similarity 117, member A##NM_001199155|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199156|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199157|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199158|KAT7|11143|K(lysine) acetyltransferase 7##NM_007067|KAT7|11143|K(lysine) acetyltransferase 7##AK293976|KAT7|11143|K(lysine) acetyltransferase 7##AK294014|KAT7|11143|K(lysine) acetyltransferase 7##AK023890|KAT7|11143|K(lysine) acetyltransferase 7##AK294052|KAT7|11143|K(lysine) acetyltransferase 7##AK294836|KAT7|11143|K(lysine) acetyltransferase 7##AF140360|KAT7|11143|K(lysine) acetyltransferase 7	0.0	
chr5	40904957	40905067	reg1009901.p1	10.624	+	AF356193 AY196783 NM_032587 TSC_hg19_v1_chr5_+_40841464 BC093825 AK304349 AB209844	-63570	+	TSC_hg19_v1_chr5_-_40835325 AK311827 NM_000997	-69657	-	TSC_hg19_v1_chr5_-_40835315 BC079477 D23661 AB055770 AK124098 BC067790 BX647123	-69709	-	TSC_hg19_v1_chr5_+_40909520 BC025402	4493	+	TSC_hg19_v1_chr5_+_40909599 AK290349 Y11720 NM_000587 BC065305 BC041807	4570	+	BC063851 TSC_hg19_v1_chr5_+_40909639 AK304848 AK312737	4633	+	AF356193|CARD6|84674|caspase recruitment domain family, member 6##AY196783|CARD6|84674|caspase recruitment domain family, member 6##NM_032587|CARD6|84674|caspase recruitment domain family, member 6##BC093825|CARD6|84674|caspase recruitment domain family, member 6##AK304349|CARD6|84674|caspase recruitment domain family, member 6##AB209844|CARD6|84674|caspase recruitment domain family, member 6##AK311827|RPL37|6167|ribosomal protein L37##NM_000997|RPL37|6167|ribosomal protein L37##BC079477|RPL37|6167|ribosomal protein L37##D23661|RPL37|6167|ribosomal protein L37##AB055770|RPL37|6167|ribosomal protein L37##AK124098|SNORD72|619564|small nucleolar RNA, C/D box 72##BC067790|RPL37|6167|ribosomal protein L37##BX647123|RPL37|6167|ribosomal protein L37##BC025402|C7|730|complement component 7##AK290349|C7|730|complement component 7##Y11720|C7|730|complement component 7##NM_000587|C7|730|complement component 7##BC065305|C7|730|complement component 7##BC041807|C7|730|complement component 7##BC063851|C7|730|complement component 7##AK304848|C7|730|complement component 7##AK312737|C7|730|complement component 7	0.282007	CTCF.p2:-9:0.282
chr7	98362495	98362623	reg1010899.p1	10.623	+	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	-115823	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-332126	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-332265	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	104971	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	105068	-	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	105117	-	NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130	0.479268	CTCF.p2:5:0.479
chr2	225643234	225643374	reg1011854.p1	10.622	+	TSC_hg19_v1_chr2_-_225450116 NM_003590	-193184	-	TSC_hg19_v1_chr2_-_225450056 BC039598	-193229	-	TSC_hg19_v1_chr2_-_225450043 AB014517 BC092409	-193263	-	TSC_hg19_v1_chr2_-_225811768 EU236710	168450	-	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	264044	-	NM_020864 BC131727 AB040919	622341	+	NM_003590|CUL3|8452|cullin 3##BC039598|CUL3|8452|cullin 3##AB014517|CUL3|8452|cullin 3##BC092409|CUL3|8452|cullin 3##EU236710|DOCK10|55619|dedicator of cytokinesis 10##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2	0.983369	CTCF.p2:16:0.983
chr3	184231640	184231773	reg1012616.p1	10.622	+	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	-133666	+	BC130322 BC136338 BC143982 L33410 NM_000460 NM_001177597 NM_001177598 TSC_hg19_v1_chr3_-_184095936	-135768	-	TSC_hg19_v1_chr3_+_184081196 NM_006232 Z49199 BC000739 AB464044 EU446997	-150477	+	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	47876	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	198057	-	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	298217	+	AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##BC130322|THPO|7066|thrombopoietin##BC136338|THPO|7066|thrombopoietin##BC143982|THPO|7066|thrombopoietin##L33410|THPO|7066|thrombopoietin##NM_000460|THPO|7066|thrombopoietin##NM_001177597|THPO|7066|thrombopoietin##NM_001177598|THPO|7066|thrombopoietin##NM_006232|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##Z49199|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##BC000739|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##EU446997|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3##AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)	0.977771	CTCF.p2:0:0.978
chr9	133582857	133582972	reg1009570.p2	10.621	+	TSC_hg19_v1_chr9_+_133569166 AK001916 AK296605 NM_014285 AK022460 AK090512 AK303163 BC000747 DQ892753 EU176744 AB463621	-13750	+	AY004252 NM_021619	-42934	+	TSC_hg19_v1_chr9_+_133455030 BC007874	-127889	+	NM_007313 AB209642 M14753	6405	+	TSC_hg19_v1_chr9_+_133710665 M30833 X16416	127753	+	TSC_hg19_v1_chr9_+_133710748 M14754 NM_005157	127874	+	AK001916|EXOSC2|23404|exosome component 2##AK296605|EXOSC2|23404|exosome component 2##NM_014285|EXOSC2|23404|exosome component 2##AK022460|EXOSC2|23404|exosome component 2##AK090512|EXOSC2|23404|exosome component 2##AK303163|EXOSC2|23404|exosome component 2##BC000747|EXOSC2|23404|exosome component 2##DQ892753|EXOSC2|23404|exosome component 2##EU176744|EXOSC2|23404|exosome component 2##AY004252|PRDM12|59335|PR domain containing 12##NM_021619|PRDM12|59335|PR domain containing 12##BC007874|FUBP3|8939|far upstream element (FUSE) binding protein 3##NM_007313|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AB209642|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M14753|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	0.997567	CTCF.p2:-1:0.998
chr2	98326483	98326594	reg1010842.p1	10.620	+	TSC_hg19_v1_chr2_-_98280591 NM_005735	-45964	-	TSC_hg19_v1_chr2_-_98280472 CU678694 DQ893438 DQ896748 AB528334 BC006372 X82207 BC004374 BC010090	-46108	-	TSC_hg19_v1_chr2_-_98275064 BC025274	-51458	-	L05148 NM_001079 AK303341 AK310637 AK310628 BC053878	3504	+	AB083211 NM_207519	24330	+	AK025852 TSC_hg19_v1_chr2_-_98408976	82384	-	NM_005735|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##DQ893438|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##DQ896748|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC006372|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##X82207|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC004374|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC010090|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC025274|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##L05148|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_001079|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK303341|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310637|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310628|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##BC053878|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AB083211|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_207519|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK025852|TMEM131|23505|transmembrane protein 131	0.100193	
chr9	123518228	123518353	reg1009023.p1	10.620	+	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	-41573	-	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	-175937	-	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	-1386632	-	AF176698 TSC_hg19_v1_chr9_-_123555558	37255	-	TSC_hg19_v1_chr9_-_123555628 BC110334 AF145024 AF193594	37331	-	BC000239 TSC_hg19_v1_chr9_-_123555670 BC018738 AK300066 AK314385 AK022484 NM_012164	37406	-	AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##AF176698|FBXW2|26190|F-box and WD repeat domain containing 2##BC110334|FBXW2|26190|F-box and WD repeat domain containing 2##AF145024|FBXW2|26190|F-box and WD repeat domain containing 2##AF193594|FBXW2|26190|F-box and WD repeat domain containing 2##BC000239|FBXW2|26190|F-box and WD repeat domain containing 2##BC018738|FBXW2|26190|F-box and WD repeat domain containing 2##AK300066|FBXW2|26190|F-box and WD repeat domain containing 2##AK314385|FBXW2|26190|F-box and WD repeat domain containing 2##AK022484|FBXW2|26190|F-box and WD repeat domain containing 2##NM_012164|FBXW2|26190|F-box and WD repeat domain containing 2	0.998507	CTCF.p2:0:0.999
chrX	134766403	134766529	reg1011024.p1	10.620	+	TSC_hg19_v1_chrX_+_134654737 BC140715 AK308423	-111735	+	TSC_hg19_v1_chrX_+_134654584 BX648113 NM_182540 AK096544 AL833319	-111897	+	BC030620 TSC_hg19_v1_chrX_+_134555878 BC051704	-210592	+	AY743709 NM_001017417 BC140735 BC140926 BC144437 BC140913	80768	+	AK098689 AY743710 AY743712 NM_001017436 NM_152582 BC028711 BC140735 BC140926 BC144437	99793	+	AY743711 NM_001017435 BC028711 BC140735 BC140926 BC144437	117067	+	BC140715|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK308423|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BX648113|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##NM_182540|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK096544|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AL833319|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BC030620|LINC00086|399668|long intergenic non-protein coding RNA 86##BC051704|LINC00086|399668|long intergenic non-protein coding RNA 86##AY743709|CT45A1|541466|cancer/testis antigen family 45, member A1##NM_001017417|CT45A1|541466|cancer/testis antigen family 45, member A1##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1##AK098689|CT45A4|441520|cancer/testis antigen family 45, member A4##AY743710|CT45A2|728911|cancer/testis antigen family 45, member A2##AY743712|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_001017436|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_152582|CT45A2|728911|cancer/testis antigen family 45, member A2##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##AY743711|CT45A3|441519|cancer/testis antigen family 45, member A3##NM_001017435|CT45A3|441519|cancer/testis antigen family 45, member A3##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3	0.730814	CTCF.p2:-24:0.731
chr3	128399662	128399785	reg1009161.p1	10.619	+	TSC_hg19_v1_chr3_-_128369724 NM_002950	-29985	-	TSC_hg19_v1_chr3_-_128369662 AK297941 AK312369 AK296905 CR749284 BC010839 AK223595	-30041	-	BC007995 TSC_hg19_v1_chr3_-_128369648 CR456742 AB527671 CU679817	-30137	-	AK297513 TSC_hg19_v1_chr3_-_128399968	222	-	NM_004637 TSC_hg19_v1_chr3_+_128444978	45259	+	TSC_hg19_v1_chr3_+_128445025 AK094449	45301	+	NM_002950|RPN1|6184|ribophorin I##AK297941|RPN1|6184|ribophorin I##AK312369|RPN1|6184|ribophorin I##AK296905|RPN1|6184|ribophorin I##CR749284|RPN1|6184|ribophorin I##BC010839|RPN1|6184|ribophorin I##AK223595|RPN1|6184|ribophorin I##BC007995|RPN1|6184|ribophorin I##CR456742|RPN1|6184|ribophorin I##AK297513|RPN1|6184|ribophorin I##NM_004637|RAB7A|7879|RAB7A, member RAS oncogene family##AK094449|RAB7A|7879|RAB7A, member RAS oncogene family	0.982033	CTCF.p2:-5:0.982
chr4	123679257	123679380	reg1009665.p1	10.618	+	AK123553 NM_001178007 NM_152618 BC055426 TSC_hg19_v1_chr4_+_123653916 BX538148	-25413	+	CU688120 CU688122 DQ645417 BC069124 BC066258 BC066259 BC066260 BC066261 BC066262 NM_001207006 NM_021803 AF254069	-137130	-	AF532913 AY283686 AY523040 DQ231169 S77835 AB451325 AB451454 AB591003 CU688118 DQ861285 AF228636 BC066254 BC066255 BC066256 BC066257 BC070338 S77834 U25676 V00564 NM_000586 X01586	-301732	-	TSC_hg19_v1_chr4_+_123747833 J04513 NM_002006 BC111737 BC118573 BC118654	68526	+	TSC_hg19_v1_chr4_+_123747985 M27968	68648	+	TSC_hg19_v1_chr4_-_123843731 DQ893139 DQ896423 BC009842 AB209758 AK291871 AF019633 NM_007083	164443	-	AK123553|BBS12|166379|Bardet-Biedl syndrome 12##NM_001178007|BBS12|166379|Bardet-Biedl syndrome 12##NM_152618|BBS12|166379|Bardet-Biedl syndrome 12##BC055426|BBS12|166379|Bardet-Biedl syndrome 12##BX538148|BBS12|166379|Bardet-Biedl syndrome 12##DQ645417|IL21|59067|interleukin 21##BC069124|IL21|59067|interleukin 21##BC066258|IL21|59067|interleukin 21##BC066259|IL21|59067|interleukin 21##BC066260|IL21|59067|interleukin 21##BC066261|IL21|59067|interleukin 21##BC066262|IL21|59067|interleukin 21##NM_001207006|IL21|59067|interleukin 21##NM_021803|IL21|59067|interleukin 21##AF254069|IL21|59067|interleukin 21##AF532913|IL2|3558|interleukin 2##AY283686|IL2|3558|interleukin 2##AY523040|IL2|3558|interleukin 2##DQ231169|IL2|3558|interleukin 2##S77835|IL2|3558|interleukin 2##AB451325|IL2|3558|interleukin 2##AB451454|IL2|3558|interleukin 2##DQ861285|IL2|3558|interleukin 2##AF228636|IL2|3558|interleukin 2##BC066254|IL2|3558|interleukin 2##BC066255|IL2|3558|interleukin 2##BC066256|IL2|3558|interleukin 2##BC066257|IL2|3558|interleukin 2##BC070338|IL2|3558|interleukin 2##S77834|IL2|3558|interleukin 2##U25676|IL2|3558|interleukin 2##V00564|IL2|3558|interleukin 2##NM_000586|IL2|3558|interleukin 2##X01586|IL2|3558|interleukin 2##J04513|FGF2|2247|fibroblast growth factor 2 (basic)##NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)##BC111737|FGF2|2247|fibroblast growth factor 2 (basic)##M27968|FGF2|2247|fibroblast growth factor 2 (basic)##DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6	0.890574	CTCF.p2:-25:0.891
chr7	106433620	106433768	reg1009124.p1	10.618	+	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	-132191	-	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	-508171	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	-508332	-	TSC_hg19_v1_chr7_+_106505701 AK292684	72019	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	72080	+	TSC_hg19_v1_chr7_+_106505893 NM_002649 X83368	72235	+	AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74##BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	0.955794	CTCF.p2:-33:0.956
chr1	222912151	222912274	reg1008785.p1	10.617	+	AK125494 NM_207468	-1655	+	TSC_hg19_v1_chr1_+_222886732 AK315930 AK293974	-25479	+	TSC_hg19_v1_chr1_+_222886714 AK304445	-25524	+	TSC_hg19_v1_chr1_+_222988422 NM_032890	76179	+	TSC_hg19_v1_chr1_-_223316591 NM_003268	404394	-	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	625259	-	AK125494|FAM177B|400823|family with sequence similarity 177, member B##NM_207468|FAM177B|400823|family with sequence similarity 177, member B##AK315930|BROX|148362|BRO1 domain and CAAX motif containing##AK293974|BROX|148362|BRO1 domain and CAAX motif containing##AK304445|BROX|148362|BRO1 domain and CAAX motif containing##NM_032890|DISP1|84976|dispatched homolog 1 (Drosophila)##NM_003268|TLR5|7100|toll-like receptor 5##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4	0.696822	CTCF.p2:-3:0.697
chr6	97347066	97347200	reg1013280.p1	10.616	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-1369	-	TSC_hg19_v1_chr6_-_97345751 BC018802 AF161474	-1381	-	HQ257923 TSC_hg19_v1_chr6_-_97345742 AF060508 AK311850 BC039464	-1423	-	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	25490	+	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	383957	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	1935447	+	NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC018802|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF161474|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##HQ257923|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF060508|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK311850|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC039464|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2	0.750286	CTCF.p2:-10:0.750
chr7	122169036	122169186	reg1009623.p2	10.616	+	AY726588 BC127714 BC127715 NM_001024613 NM_001160264 BC136684 BC144367 AK300742	-224522	-	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	-384822	-	TSC_hg19_v1_chr7_+_121513214 U88967	-655890	+	BC022038 AF447589 NM_139175 AK098524	170086	-	AK058116 AK098654 BC029264 NM_198085	173881	-	AY264289 TSC_hg19_v1_chr7_-_122526515 AF401638 BC054339 BC136601 BC144278 BC144279 AK098170 AK126518	357387	-	AY726588|FEZF1|389549|FEZ family zinc finger 1##BC127714|FEZF1|389549|FEZ family zinc finger 1##BC127715|FEZF1|389549|FEZ family zinc finger 1##NM_001024613|FEZF1|389549|FEZ family zinc finger 1##NM_001160264|FEZF1|389549|FEZ family zinc finger 1##BC136684|FEZF1|389549|FEZ family zinc finger 1##BC144367|FEZF1|389549|FEZ family zinc finger 1##AK300742|FEZF1|389549|FEZ family zinc finger 1##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase##U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##BC022038|RNF133|168433|ring finger protein 133##AF447589|RNF133|168433|ring finger protein 133##NM_139175|RNF133|168433|ring finger protein 133##AK098524|RNF133|168433|ring finger protein 133##AK058116|RNF148|378925|ring finger protein 148##AK098654|RNF148|378925|ring finger protein 148##BC029264|RNF148|378925|ring finger protein 148##NM_198085|RNF148|378925|ring finger protein 148##AY264289|CADPS2|93664|Ca++-dependent secretion activator 2##AF401638|CADPS2|93664|Ca++-dependent secretion activator 2##BC054339|CADPS2|93664|Ca++-dependent secretion activator 2##BC136601|CADPS2|93664|Ca++-dependent secretion activator 2##BC144278|CADPS2|93664|Ca++-dependent secretion activator 2##BC144279|CADPS2|93664|Ca++-dependent secretion activator 2##AK126518|CADPS2|93664|Ca++-dependent secretion activator 2	0.997919	CTCF.p2:6:0.998
chr5	32076932	32077059	reg1011015.p1	10.615	+	NM_178140	-277965	+	TSC_hg19_v1_chr5_+_31639424 AB002298	-437525	+	NM_018356 TSC_hg19_v1_chr5_+_31532398 BC032845 AK299156 AK002055 BC021215 AB527598	-544560	+	TSC_hg19_v1_chr5_+_32173523 AK055939	96521	+	TSC_hg19_v1_chr5_-_32174291 AJ296152	97273	-	TSC_hg19_v1_chr5_-_32174327 BC063586	97345	-	NM_178140|PDZD2|23037|PDZ domain containing 2##AB002298|PDZD2|23037|PDZ domain containing 2##NM_018356|C5orf22|55322|chromosome 5 open reading frame 22##BC032845|C5orf22|55322|chromosome 5 open reading frame 22##AK299156|C5orf22|55322|chromosome 5 open reading frame 22##AK002055|C5orf22|55322|chromosome 5 open reading frame 22##BC021215|C5orf22|55322|chromosome 5 open reading frame 22##AK055939|LOC153546|153546|uncharacterized LOC153546##AJ296152|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##BC063586|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)	0.523224	CTCF.p2:14:0.208	CTCF.p2:-74:0.316
chr11	74099848	74099951	reg1009912.p1	10.614	+	BC089446 TSC_hg19_v1_chr11_-_74022686 BC040582 AL833965 AY358521 AK300598 AY327887 BC117333 BC126170 AY313448 NM_182904	-77217	-	TSC_hg19_v1_chr11_+_73882440 AB385584 CU678344 DQ892348 DQ895778	-217444	+	TSC_hg19_v1_chr11_+_73882350 BC003046 BC050705 AK225647 AF157028 NM_016147 AK001381	-217556	+	TSC_hg19_v1_chr11_-_74109469 BC027950 AB019210 AK056591 BC059360 NM_173582	9591	-	CR936625 DQ192291 NM_005472	78697	-	TSC_hg19_v1_chr11_-_74204756 NM_001144869	104851	-	BC089446|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC040582|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AL833965|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY358521|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AK300598|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY327887|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC117333|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC126170|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY313448|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##NM_182904|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##DQ892348|PPME1|51400|protein phosphatase methylesterase 1##DQ895778|PPME1|51400|protein phosphatase methylesterase 1##BC003046|PPME1|51400|protein phosphatase methylesterase 1##BC050705|PPME1|51400|protein phosphatase methylesterase 1##AK225647|PPME1|51400|protein phosphatase methylesterase 1##AF157028|PPME1|51400|protein phosphatase methylesterase 1##NM_016147|PPME1|51400|protein phosphatase methylesterase 1##AK001381|PPME1|51400|protein phosphatase methylesterase 1##AB019210|PGM2L1|283209|phosphoglucomutase 2-like 1##AK056591|PGM2L1|283209|phosphoglucomutase 2-like 1##BC059360|PGM2L1|283209|phosphoglucomutase 2-like 1##NM_173582|PGM2L1|283209|phosphoglucomutase 2-like 1##CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_001144869|LIPT2|387787|lipoyl(octanoyl) transferase 2 (putative)	0.25444	CTCF.p2:-2:0.254
chr16	89623968	89624096	reg1011973.p1	10.614	+	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	-49218	+	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	-67101	-	AK293862 NM_001242885	-236492	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	3033	+	TSC_hg19_v1_chr16_+_89627089 BC093063 AK026501 AK093246 AK130964 AK290893 AK294655 AK308545 BC066320 D28432 X64707 AK025405 AK127579 AK130963 AK297198 BC007345 BC004954 BC006179 BC063378 BC007805 BC013078 BC014167 BC027463 BC010994 BC000851 BC020804 NM_033251 BC007563	3075	+	TSC_hg19_v1_chr16_+_89642221 AJ133798 NM_014427 NM_153636 BC064577 BC035334 CU690070 AB463543	18175	+	NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13##BC093063|RPL13|6137|ribosomal protein L13##AK026501|RPL13|6137|ribosomal protein L13##AK130964|RPL13|6137|ribosomal protein L13##AK290893|RPL13|6137|ribosomal protein L13##AK294655|RPL13|6137|ribosomal protein L13##AK308545|RPL13|6137|ribosomal protein L13##BC066320|RPL13|6137|ribosomal protein L13##D28432|RPL13|6137|ribosomal protein L13##X64707|RPL13|6137|ribosomal protein L13##AK025405|RPL13|6137|ribosomal protein L13##AK127579|RPL13|6137|ribosomal protein L13##AK130963|RPL13|6137|ribosomal protein L13##AK297198|RPL13|6137|ribosomal protein L13##BC007345|RPL13|6137|ribosomal protein L13##BC004954|RPL13|6137|ribosomal protein L13##BC006179|RPL13|6137|ribosomal protein L13##BC063378|RPL13|6137|ribosomal protein L13##BC007805|RPL13|6137|ribosomal protein L13##BC013078|RPL13|6137|ribosomal protein L13##BC014167|RPL13|6137|ribosomal protein L13##BC027463|RPL13|6137|ribosomal protein L13##BC010994|RPL13|6137|ribosomal protein L13##BC000851|RPL13|6137|ribosomal protein L13##BC020804|RPL13|6137|ribosomal protein L13##NM_033251|RPL13|6137|ribosomal protein L13##BC007563|RPL13|6137|ribosomal protein L13##AJ133798|CPNE7|27132|copine VII##NM_014427|CPNE7|27132|copine VII##NM_153636|CPNE7|27132|copine VII##BC064577|CPNE7|27132|copine VII##BC035334|CPNE7|27132|copine VII	0.789514	CTCF.p2:5:0.790
chr6	34577470	34577589	reg1008516.p2	10.614	+	AB031549 BC021299 AF071538 AK301543 NM_001252294 NM_012391	-53433	-	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	-94875	+	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	-143625	+	TSC_hg19_v1_chr6_-_34664565 AK313410 BC002328 BC010184 AK056964 BC075810	87017	-	TSC_hg19_v1_chr6_-_34664631 NM_022758 NM_024294	87097	-	NM_003093	147341	+	AB031549|SPDEF|25803|SAM pointed domain containing ets transcription factor##BC021299|SPDEF|25803|SAM pointed domain containing ets transcription factor##AF071538|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK301543|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_001252294|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_012391|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK313410|C6orf106|64771|chromosome 6 open reading frame 106##BC002328|C6orf106|64771|chromosome 6 open reading frame 106##BC010184|C6orf106|64771|chromosome 6 open reading frame 106##AK056964|C6orf106|64771|chromosome 6 open reading frame 106##BC075810|C6orf106|64771|chromosome 6 open reading frame 106##NM_022758|C6orf106|64771|chromosome 6 open reading frame 106##NM_024294|C6orf106|64771|chromosome 6 open reading frame 106##NM_003093|SNRPC|6631|small nuclear ribonucleoprotein polypeptide C	0.839264	CTCF.p2:-7:0.839
chr1	243507388	243507538	reg1009812.p1	10.613	+	TSC_hg19_v1_chr1_+_243419405 AK297105 AF250731	-88028	+	BC032454 TSC_hg19_v1_chr1_+_243419371 AK299249	-88092	+	TSC_hg19_v1_chr1_+_243419357 AK299212	-88108	+	AF135794 AB463341 AM392791 AM392849 AJ245709 AF124141 AK308052 BC020479 AF085234 AY005799 BC121154 NM_005465 NM_181690	499064	-	AL117525 NM_001206729	499422	-	TSC_hg19_v1_chr1_+_244214553 NM_205768	707093	+	AK297105|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF250731|SDCCAG8|10806|serologically defined colon cancer antigen 8##BC032454|SDCCAG8|10806|serologically defined colon cancer antigen 8##AK299249|SDCCAG8|10806|serologically defined colon cancer antigen 8##AK299212|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF135794|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392791|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392849|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AJ245709|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF124141|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AK308052|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC020479|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF085234|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AY005799|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC121154|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_005465|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_181690|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AL117525|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_001206729|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_205768|ZNF238|10472|zinc finger protein 238	0.998932	CTCF.p2:-25:0.999
chr1	77366977	77367104	reg1011237.p1	10.613	+	TSC_hg19_v1_chr1_+_77333164 AK095758 AK300902 AK295019 BC001201 NM_030965	-33869	+	TSC_hg19_v1_chr1_+_77333125 AK056241	-33913	+	TSC_hg19_v1_chr1_+_77165439 D28460	-201600	+	Y07596 CU676676 AF022913 BC020737 TSC_hg19_v1_chr1_-_77685112 BC026186 AK304340 AK313015 BX648473 NM_005482	318063	-	TSC_hg19_v1_chr1_+_77747603 AF445193 NM_174858	380591	+	TSC_hg19_v1_chr1_+_77747727 BC036666 AK090967 AX746708	380694	+	AK095758|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK300902|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK295019|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##BC001201|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##NM_030965|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK056241|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##D28460|TPI1|7167|triosephosphate isomerase 1##Y07596|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AF022913|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##BC020737|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##BC026186|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AK304340|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AK313015|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##BX648473|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##NM_005482|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AF445193|AK5|26289|adenylate kinase 5##NM_174858|AK5|26289|adenylate kinase 5##BC036666|AK5|26289|adenylate kinase 5##AK090967|AK5|26289|adenylate kinase 5	0.591333	CTCF.p2:-1:0.591
chr22	25348155	25348289	reg1011097.p1	10.613	+	BC130647 BC130649 CR456388 NM_001001663	-12910	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-146012	+	AB079368 NM_001008496 AK302409 AK315806	-177538	-	BC171801 NM_001145206	75718	+	TSC_hg19_v1_chr22_+_25591072 AK025418	242907	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	247622	+	BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AB079368|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001008496|PIWIL3|440822|piwi-like 3 (Drosophila)##AK302409|PIWIL3|440822|piwi-like 3 (Drosophila)##AK315806|PIWIL3|440822|piwi-like 3 (Drosophila)##BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##AK025418|KIAA1671|85379|KIAA1671##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3	0.0	
chr7	145787275	145787402	reg1011783.p1	10.613	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-1254202	-	TSC_hg19_v1_chr7_-_144533086 AK091736	-1254249	-	NM_001080413 AB528776	-1680019	-	NM_014141	26114	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	26546	+	TSC_hg19_v1_chr7_+_148036552 CR933671	2249227	+	AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##AK091736|TPK1|27010|thiamin pyrophosphokinase 1##NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##CR933671|CNTNAP2|26047|contactin associated protein-like 2	0.549959	CTCF.p2:3:0.550
chr3	118817570	118817716	reg1012124.p1	10.612	+	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	-63960	-	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	-64110	-	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-2653270	-	AK097667 NM_152538 AK292387	47254	-	AK057421 NM_152539 BC130475 BC144197	47353	+	AK303924 AK313787 NM_006952 AB002155	74771	+	AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11##AK057421|C3orf30|152405|chromosome 3 open reading frame 30##NM_152539|C3orf30|152405|chromosome 3 open reading frame 30##BC130475|C3orf30|152405|chromosome 3 open reading frame 30##BC144197|C3orf30|152405|chromosome 3 open reading frame 30##AK303924|UPK1B|7348|uroplakin 1B##AK313787|UPK1B|7348|uroplakin 1B##NM_006952|UPK1B|7348|uroplakin 1B##AB002155|UPK1B|7348|uroplakin 1B	0.531448	CTCF.p2:19:0.531
chr5	130753063	130753187	reg1008969.p1	10.612	+	TSC_hg19_v1_chr5_+_130599794 BC058909	-153325	+	AK312406 TSC_hg19_v1_chr5_+_130599768	-153357	+	TSC_hg19_v1_chr5_+_130599764 BC023555 BC050430	-153369	+	AF478468 AF478469 AB527407 TSC_hg19_v1_chr5_-_130970764	217632	-	BC140820 BC144627 TSC_hg19_v1_chr5_-_130970834	217694	-	BC133703 TSC_hg19_v1_chr5_-_130970893 AF394782 AK302640	217753	-	BC058909|CDC42SE2|56990|CDC42 small effector 2##AK312406|CDC42SE2|56990|CDC42 small effector 2##BC023555|CDC42SE2|56990|CDC42 small effector 2##BC050430|CDC42SE2|56990|CDC42 small effector 2##AF478468|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF478469|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC140820|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC144627|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC133703|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF394782|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AK302640|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	0.998863	CTCF.p2:28:0.999
chr8	70576123	70576241	reg1009818.p2	10.612	+	AY101175 TSC_hg19_v1_chr8_+_70405081 AK055607 BX571746	-171093	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	-171143	+	TSC_hg19_v1_chr8_+_70379077 AK307951	-197102	+	BC137424 BC144618 NM_001146009	169221	-	AK022760 NM_001146008	169442	-	AK308488 AF205075 AK096879 NM_030958	171067	-	AY101175|SULF1|23213|sulfatase 1##AK055607|SULF1|23213|sulfatase 1##BX571746|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	0.996111	CTCF.p2:-19:0.996
chr16	82675088	82675218	reg1010118.p1	10.611	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-14484	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	-14564	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	-14759	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	1166447	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	1166503	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	1257616	+	AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase	0.988934	CTCF.p2:-28:0.989
chr3	142840291	142840447	reg1011122.p3	10.610	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-1718	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-119939	+	TSC_hg19_v1_chr3_+_142682794 BC062727	-157539	+	BC067737 TSC_hg19_v1_chr3_+_142895211	54802	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	726898	-	NM_173552 AK315082	850283	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC062727|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58	1.162221	CTCF.p2:-72:0.990
chr5	51989249	51989378	reg1011927.p1	10.610	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	-1310060	+	BC031213 NM_002202	-1310356	+	TSC_hg19_v1_chr5_+_49962920 AB463183 AM393004	-2026386	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	94676	+	AK025729 BC007650 TSC_hg19_v1_chr5_+_52095991 BC005889 BC007249 AF132951 AK312633 AF139828 BC022789	106673	+	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	295807	+	AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##BC031213|ISL1|3670|ISL LIM homeobox 1##NM_002202|ISL1|3670|ISL LIM homeobox 1##AM393004|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1##AK025729|PELO|53918|pelota homolog (Drosophila)##BC007650|PELO|53918|pelota homolog (Drosophila)##BC005889|PELO|53918|pelota homolog (Drosophila)##BC007249|PELO|53918|pelota homolog (Drosophila)##AF132951|PELO|53918|pelota homolog (Drosophila)##AK312633|PELO|53918|pelota homolog (Drosophila)##AF139828|PELO|53918|pelota homolog (Drosophila)##BC022789|PELO|53918|pelota homolog (Drosophila)##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	0.955639	CTCF.p2:4:0.956
chr6	54582797	54582917	reg1010968.p1	10.610	+	BC070278 NM_014464 AK312918 BC056235 AB022277 AF195116 AF195117 CU687080 CU691132 EU832329 EU832414	-409582	+	NM_138569 BX647567 AK055530	-699107	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	-922926	+	AK055204 NM_001010872 BC101628 BC112275	128731	+	NM_001526 AK314279	456237	+	AY358198 NM_207410	609409	+	BC070278|TINAG|27283|tubulointerstitial nephritis antigen##NM_014464|TINAG|27283|tubulointerstitial nephritis antigen##AK312918|TINAG|27283|tubulointerstitial nephritis antigen##BC056235|TINAG|27283|tubulointerstitial nephritis antigen##AB022277|TINAG|27283|tubulointerstitial nephritis antigen##AF195116|TINAG|27283|tubulointerstitial nephritis antigen##AF195117|TINAG|27283|tubulointerstitial nephritis antigen##EU832329|TINAG|27283|tubulointerstitial nephritis antigen##EU832414|TINAG|27283|tubulointerstitial nephritis antigen##NM_138569|MLIP|90523|muscular LMNA-interacting protein##BX647567|MLIP|90523|muscular LMNA-interacting protein##AK055530|MLIP|90523|muscular LMNA-interacting protein##AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1##AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B##NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2##AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2##AY358198|GFRAL|389400|GDNF family receptor alpha like##NM_207410|GFRAL|389400|GDNF family receptor alpha like	0.995555	CTCF.p2:-13:0.996
chr9	35945874	35946008	reg1009805.p1	10.610	+	AY358408 NM_001039792	-39753	+	AY726589 NM_001004487 BC136715 BC136716	-75553	-	TSC_hg19_v1_chr9_+_35829375 BC064951 NM_001042590 BC082765	-116463	+	HQ258184 BC104869 BC113651 NM_019897	12181	-	TSC_hg19_v1_chr9_+_36036901 AK292653 NM_021111 AK315073 BC050306 BC032240 BC060806 BC137093 CU687432	91006	+	TSC_hg19_v1_chr9_+_36136731 AK074488 BC017918 AK075091 AK298741 AK307243 CR749781 AY039756 NM_022343	190791	+	AY358408|HRCT1|646962|histidine rich carboxyl terminus 1##NM_001039792|HRCT1|646962|histidine rich carboxyl terminus 1##AY726589|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##NM_001004487|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136715|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136716|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC064951|TMEM8B|51754|transmembrane protein 8B##NM_001042590|TMEM8B|51754|transmembrane protein 8B##BC082765|TMEM8B|51754|transmembrane protein 8B##HQ258184|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC104869|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC113651|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##NM_019897|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK074488|GLIPR2|152007|GLI pathogenesis-related 2##BC017918|GLIPR2|152007|GLI pathogenesis-related 2##AK075091|GLIPR2|152007|GLI pathogenesis-related 2##AK298741|GLIPR2|152007|GLI pathogenesis-related 2##AK307243|GLIPR2|152007|GLI pathogenesis-related 2##CR749781|GLIPR2|152007|GLI pathogenesis-related 2##AY039756|GLIPR2|152007|GLI pathogenesis-related 2##NM_022343|GLIPR2|152007|GLI pathogenesis-related 2	0.070242	
chrX	118139019	118139146	reg1013067.p1	10.610	+	TSC_hg19_v1_chrX_+_118109314 AK026265	-29744	+	TSC_hg19_v1_chrX_+_118108607 BC098283 BC099847 BC100671 BC103491 NM_001031855 NM_024778	-30429	+	TSC_hg19_v1_chrX_+_118108580 AK091777 AK290198 AX747177	-30502	+	NM_020721	145459	-	TSC_hg19_v1_chrX_+_118370247 NM_006667 AK313956 Y12711 BC034238 AK293618 DQ891774 DQ894958 CR456993	231183	+	NM_145305 TSC_hg19_v1_chrX_+_118533308 AK094254 BC071871	394205	+	AK026265|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC098283|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC099847|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC100671|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC103491|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_001031855|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_024778|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK091777|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK290198|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_020721|KIAA1210|57481|KIAA1210##NM_006667|PGRMC1|10857|progesterone receptor membrane component 1##AK313956|PGRMC1|10857|progesterone receptor membrane component 1##Y12711|PGRMC1|10857|progesterone receptor membrane component 1##BC034238|PGRMC1|10857|progesterone receptor membrane component 1##AK293618|PGRMC1|10857|progesterone receptor membrane component 1##DQ891774|PGRMC1|10857|progesterone receptor membrane component 1##DQ894958|PGRMC1|10857|progesterone receptor membrane component 1##CR456993|PGRMC1|10857|progesterone receptor membrane component 1##NM_145305|SLC25A43|203427|solute carrier family 25, member 43##AK094254|SLC25A43|203427|solute carrier family 25, member 43##BC071871|SLC25A43|203427|solute carrier family 25, member 43	0.126648	
chr14	74037752	74037884	reg1010288.p1	10.608	+	TSC_hg19_v1_chr14_+_74035979 DQ893488 DQ896406 BC004436 BC006500 L40401 AY005822 CU678722	-1821	+	AK001939 DQ082755 AK223635 NM_006821 BC006335 TSC_hg19_v1_chr14_+_74035788	-2043	+	AK093515 AX748177 BC047590 NM_001220484 NM_203309	-12172	-	BC090945 NM_152331	20591	+	DQ082756 NM_001037162	45729	+	NM_001201366 NM_031427 AF542071 BC005343 AL833654 AK315392	73835	+	DQ893488|ACOT2|10965|acyl-CoA thioesterase 2##DQ896406|ACOT2|10965|acyl-CoA thioesterase 2##BC004436|ACOT2|10965|acyl-CoA thioesterase 2##BC006500|ACOT2|10965|acyl-CoA thioesterase 2##L40401|ACOT2|10965|acyl-CoA thioesterase 2##AY005822|ACOT2|10965|acyl-CoA thioesterase 2##AK001939|ACOT2|10965|acyl-CoA thioesterase 2##DQ082755|ACOT2|10965|acyl-CoA thioesterase 2##AK223635|ACOT2|10965|acyl-CoA thioesterase 2##NM_006821|ACOT2|10965|acyl-CoA thioesterase 2##BC006335|ACOT2|10965|acyl-CoA thioesterase 2##AK093515|HEATR4|399671|HEAT repeat containing 4##BC047590|HEATR4|399671|HEAT repeat containing 4##NM_001220484|HEATR4|399671|HEAT repeat containing 4##NM_203309|HEATR4|399671|HEAT repeat containing 4##BC090945|ACOT4|122970|acyl-CoA thioesterase 4##NM_152331|ACOT4|122970|acyl-CoA thioesterase 4##DQ082756|ACOT6|641372|acyl-CoA thioesterase 6##NM_001037162|ACOT6|641372|acyl-CoA thioesterase 6##NM_001201366|DNAL1|83544|dynein, axonemal, light chain 1##NM_031427|DNAL1|83544|dynein, axonemal, light chain 1##AF542071|DNAL1|83544|dynein, axonemal, light chain 1##BC005343|DNAL1|83544|dynein, axonemal, light chain 1##AL833654|DNAL1|83544|dynein, axonemal, light chain 1##AK315392|DNAL1|83544|dynein, axonemal, light chain 1	0.984539	CTCF.p2:10:0.985
chr1	61314397	61314521	reg1011265.p1	10.608	+	BC027878 AK124828 NM_152377	-775026	-	BC032594 TSC_hg19_v1_chr1_-_60392478	-921990	-	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	-922074	-	AK092769 TSC_hg19_v1_chr1_+_61542908	228397	+	TSC_hg19_v1_chr1_+_61542928 AK299289 NM_001145511	228477	+	TSC_hg19_v1_chr1_+_61547427 AK299579 NM_001145512	233001	+	BC027878|C1orf87|127795|chromosome 1 open reading frame 87##AK124828|C1orf87|127795|chromosome 1 open reading frame 87##NM_152377|C1orf87|127795|chromosome 1 open reading frame 87##BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK299289|NFIA|4774|nuclear factor I/A##NM_001145511|NFIA|4774|nuclear factor I/A##AK299579|NFIA|4774|nuclear factor I/A##NM_001145512|NFIA|4774|nuclear factor I/A	0.885407	CTCF.p2:-11:0.885
chr17	32001714	32001883	reg1010403.p2	10.608	+	AL834182 NM_183377	-381793	-	AF216311 NM_173847 BC100886 BC100887	-682896	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-746595	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	481889	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	580533	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	595475	+	AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7	0.258632	CTCF.p2:16:0.259
chr4	40899729	40899863	reg1009759.p1	10.608	+	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-40621	-	BC042401 NM_024677 BC036568 AK024063	-147850	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-267089	-	BC088372 TSC_hg19_v1_chr4_-_40936716	36882	-	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	316773	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	359100	+	AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK304206|RBM47|54502|RNA binding motif protein 47##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.861881	CTCF.p2:7:0.862
chr1	193376094	193376203	reg1008110.p1	10.607	+	AF288390 BC022507 NM_003783	-220416	-	TSC_hg19_v1_chr1_+_193091308 BC007325 AF312865 AK314772 AB590625 CU688012 EU831787 EU831865 BC011808	-284792	+	TSC_hg19_v1_chr1_+_193091242 AK300929 BC065037	-284909	+	EU251076 BC103947 BC103948 BC103949 BC103950 AY359444 NM_198503 BX647852 AK309729 TSC_hg19_v1_chr1_-_196577612	3201377	-	TSC_hg19_v1_chr1_-_196577676 AK131498	3201534	-	NM_000186 NM_001014975 TSC_hg19_v1_chr1_+_196621172 AK291395 AK225649 X07523 Y00716 BC037285 BC012610 BC110643 BC073982 BC142699 CU691466	3244979	+	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC007325|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF312865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK314772|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831787|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK300929|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC065037|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU251076|KCNT2|343450|potassium channel, subfamily T, member 2##BC103947|KCNT2|343450|potassium channel, subfamily T, member 2##BC103948|KCNT2|343450|potassium channel, subfamily T, member 2##BC103949|KCNT2|343450|potassium channel, subfamily T, member 2##BC103950|KCNT2|343450|potassium channel, subfamily T, member 2##AY359444|KCNT2|343450|potassium channel, subfamily T, member 2##NM_198503|KCNT2|343450|potassium channel, subfamily T, member 2##BX647852|KCNT2|343450|potassium channel, subfamily T, member 2##AK309729|KCNT2|343450|potassium channel, subfamily T, member 2##AK131498|KCNT2|343450|potassium channel, subfamily T, member 2##NM_000186|CFH|3075|complement factor H##NM_001014975|CFH|3075|complement factor H##AK291395|CFH|3075|complement factor H##AK225649|CFH|3075|complement factor H##X07523|CFH|3075|complement factor H##Y00716|CFH|3075|complement factor H##BC037285|CFH|3075|complement factor H##BC012610|CFH|3075|complement factor H##BC110643|CFH|3075|complement factor H##BC073982|CFH|3075|complement factor H##BC142699|CFH|3075|complement factor H	0.22659	CTCF.p2:-7:0.227
chr8	138903263	138903383	reg1010983.p1	10.607	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-2433122	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-2433665	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-3178049	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	605783	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	1022921	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	1811959	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.924996	CTCF.p2:0:0.925
chrX	41113033	41113171	reg1012228.p1	10.607	+	TSC_hg19_v1_chrX_+_40944880 NM_001039590 NM_001039591	-168230	+	TSC_hg19_v1_chrX_-_40595139 AK308871	-517973	-	TSC_hg19_v1_chrX_-_40594999 AK293070	-518122	-	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	79548	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	80355	+	AK304661 TSC_hg19_v1_chrX_+_41193866 AK127902	80763	+	NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked##NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked##AK308871|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	0.998668	CTCF.p2:27:0.999
chr5	110886362	110886489	reg1008677.p2	10.606	+	BC042956 TSC_hg19_v1_chr5_-_110848300	-38131	-	AK054566 NM_139164 TSC_hg19_v1_chr5_-_110848234 AK290312 AK310848 BC019632 AK125317 AK308851 AK315863 AK315869	-38223	-	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	-326476	+	NM_001142483	205522	-	TSC_hg19_v1_chr5_-_111092886 BC019068 BC001783 AK309667 AK310585 BX649051 BC072013 BC072443	206461	-	AK315617 TSC_hg19_v1_chr5_-_111092922 NM_004772 U30521	206511	-	BC042956|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK054566|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_139164|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK290312|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK310848|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC019632|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK125317|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK308851|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315863|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315869|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13##BC019068|C5orf13|9315|chromosome 5 open reading frame 13##BX649051|C5orf13|9315|chromosome 5 open reading frame 13##BC072013|C5orf13|9315|chromosome 5 open reading frame 13##BC072443|C5orf13|9315|chromosome 5 open reading frame 13##AK315617|C5orf13|9315|chromosome 5 open reading frame 13##NM_004772|C5orf13|9315|chromosome 5 open reading frame 13##U30521|C5orf13|9315|chromosome 5 open reading frame 13	0.993036	CTCF.p2:-6:0.993
chr9	132499972	132500095	reg1009251.p1	10.606	+	TSC_hg19_v1_chr9_+_132428029 AF061970	-71967	+	BC014645 NM_016307 TSC_hg19_v1_chr9_+_132427927	-72110	+	CU688098 EU831817 EU831894 BC065913 TSC_hg19_v1_chr9_-_132404419 AK023004 BC001719 AK225618 AK299193 AK000555 AK292807 NM_001202403 NM_017873 NM_177999	-95664	-	AB590756 AF027740 AF217965 AF010316 TSC_hg19_v1_chr9_-_132515313 AK311947 BC008280 NM_004878	15283	-	TSC_hg19_v1_chr9_+_132565426 AF317129 NM_014506	65387	+	TSC_hg19_v1_chr9_+_132565465 BC015578 DQ893204 DQ893205 DQ893696 DQ896532 DQ896533 DQ896867	65440	+	AF061970|PRRX2|51450|paired related homeobox 2##BC014645|PRRX2|51450|paired related homeobox 2##NM_016307|PRRX2|51450|paired related homeobox 2##EU831817|ASB6|140459|ankyrin repeat and SOCS box containing 6##EU831894|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC065913|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK023004|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC001719|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK225618|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK299193|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK000555|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK292807|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_001202403|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_017873|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_177999|ASB6|140459|ankyrin repeat and SOCS box containing 6##AF027740|PTGES|9536|prostaglandin E synthase##AF217965|PTGES|9536|prostaglandin E synthase##AF010316|PTGES|9536|prostaglandin E synthase##AK311947|PTGES|9536|prostaglandin E synthase##BC008280|PTGES|9536|prostaglandin E synthase##NM_004878|PTGES|9536|prostaglandin E synthase##AF317129|TOR1B|27348|torsin family 1, member B (torsin B)##NM_014506|TOR1B|27348|torsin family 1, member B (torsin B)##BC015578|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893204|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893205|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893696|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896532|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896533|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896867|TOR1B|27348|torsin family 1, member B (torsin B)	0.9998	CTCF.p2:2:1.000
chr11	90209722	90209841	reg1010124.p2	10.605	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-225371	+	AK290231 NM_001144073 NM_012124	-253250	-	CU687242 BC002339 BC072461 TSC_hg19_v1_chr11_-_89956218 AF192466 AK226099 AK225565 AK312663 AF123249 AK225365	-253579	-	NM_001008781	1875480	+	BC069163 NM_005959 U25341 AY521019	2493058	+	TSC_hg19_v1_chr11_-_92930978 CU690400	2721206	-	AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC002339|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC072461|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF192466|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK226099|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225565|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK312663|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF123249|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225365|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B	0.999447	CTCF.p2:0:0.999
chr5	14108755	14108862	reg1008656.p1	10.605	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-96938	-	AX800026 AY045575 NM_001369	-164220	-	TSC_hg19_v1_chr5_-_11904184 AK296232	-2204624	-	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	34864	+	TSC_hg19_v1_chr5_+_14488527 AK131423	379731	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	473092	+	AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A	0.906201	CTCF.p2:-16:0.906
chr6	76007046	76007178	reg1012333.p1	10.605	+	TSC_hg19_v1_chr6_+_75994737 EF565086	-12357	+	NM_001143958 NM_018247 TSC_hg19_v1_chr6_-_75994700	-12442	-	TSC_hg19_v1_chr6_-_75994502 AK001718 AK295567 AK293225	-12606	-	AK290232 BC136443 BC136444 AL832009 AK097021 BC110829 BX647178 NM_015687 TSC_hg19_v1_chr6_-_76203497	196264	-	AK126921 TSC_hg19_v1_chr6_+_76311581	304293	+	TSC_hg19_v1_chr6_+_76311617 NM_001100409 NM_015571	304507	+	EF565086|LOC100506804|100506804|uncharacterized LOC100506804##NM_001143958|TMEM30A|55754|transmembrane protein 30A##NM_018247|TMEM30A|55754|transmembrane protein 30A##AK001718|TMEM30A|55754|transmembrane protein 30A##AK295567|TMEM30A|55754|transmembrane protein 30A##AK293225|TMEM30A|55754|transmembrane protein 30A##AK290232|FILIP1|27145|filamin A interacting protein 1##BC136443|FILIP1|27145|filamin A interacting protein 1##BC136444|FILIP1|27145|filamin A interacting protein 1##AL832009|FILIP1|27145|filamin A interacting protein 1##AK097021|FILIP1|27145|filamin A interacting protein 1##BX647178|FILIP1|27145|filamin A interacting protein 1##NM_015687|FILIP1|27145|filamin A interacting protein 1##AK126921|SENP6|26054|SUMO1/sentrin specific peptidase 6##NM_001100409|SENP6|26054|SUMO1/sentrin specific peptidase 6##NM_015571|SENP6|26054|SUMO1/sentrin specific peptidase 6	0.828361	CTCF.p2:-9:0.828
chr6_ssto_hap7	2897262	2897381	reg1011871.p1	10.605	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999083	CTCF.p2:8:0.999
chr12	75728221	75728344	reg1009851.p1	10.604	+	BC033860 AK091839 AX747212 NM_032606	-4463	-	AK094720 NM_139136 NM_139137 NM_153748	-124772	-	AK309245 AB209994 AK294269 TSC_hg19_v1_chr12_-_75603243	-125054	-	AY358731 BC014603 NM_152779 DQ894020 EU176187 CU677065	180	+	BC016749 AK093175 AX747973 TSC_hg19_v1_chr12_+_75784869	56577	+	TSC_hg19_v1_chr12_+_75784878 BX640916 BC029557 NM_152436 DQ891533 DQ894722	56603	+	BC033860|CAPS2|84698|calcyphosine 2##AK091839|CAPS2|84698|calcyphosine 2##NM_032606|CAPS2|84698|calcyphosine 2##AK094720|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##NM_139136|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##NM_139137|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##NM_153748|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AK309245|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AB209994|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AK294269|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	0.90011	CTCF.p2:-6:0.900
chr9	126803378	126803502	reg1009738.p2	10.603	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-29369	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-29557	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-111129	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	216570	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	216805	+	TSC_hg19_v1_chr9_+_127020255 AB026289	216824	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.925182	CTCF.p2:2:0.925
chr14	89493726	89493860	reg1009589.p2	10.602	+	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-202800	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-234583	-	NM_207662 BC027607 AF474376	-433040	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	384983	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	389617	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	591802	-	AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3	0.841084	CTCF.p2:9:0.625	CTCF.p2:32:0.216
chr19	54527265	54527381	reg1010566.p1	10.602	+	AF288386 AF361352 DQ895210 EU176325 EU176667 TSC_hg19_v1_chr19_+_54496186	-31230	+	BC021552 NM_031897 NM_145814 NM_145815	-31782	+	AF361354 NM_031895 AF288388	-60964	+	FN398145 FJ584316 FJ584317 FJ584318 FJ584319 FJ584320 FJ882051 DQ479397 BC100942 BC100943 AX721201 AY358542 NM_198481	39797	-	DQ479398 NM_001135686	57310	-	TSC_hg19_v1_chr19_-_54604114 AF391163 AF474153 DQ893697 DQ894733 AF391162 AK091111 AX746784 AK311307 AK130199 AF391164 AF474152 AF251702 NM_130771 NM_133168 NM_133169 NM_206818	76796	-	AF288386|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##AF361352|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##DQ895210|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##EU176325|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##EU176667|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##BC021552|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##NM_031897|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##NM_145814|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##NM_145815|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##AF361354|CACNG8|59283|calcium channel, voltage-dependent, gamma subunit 8##NM_031895|CACNG8|59283|calcium channel, voltage-dependent, gamma subunit 8##AF288388|CACNG8|59283|calcium channel, voltage-dependent, gamma subunit 8##FN398145|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584316|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584317|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584318|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584319|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584320|VSTM1|284415|V-set and transmembrane domain containing 1##FJ882051|VSTM1|284415|V-set and transmembrane domain containing 1##DQ479397|VSTM1|284415|V-set and transmembrane domain containing 1##BC100942|VSTM1|284415|V-set and transmembrane domain containing 1##BC100943|VSTM1|284415|V-set and transmembrane domain containing 1##AY358542|VSTM1|284415|V-set and transmembrane domain containing 1##NM_198481|VSTM1|284415|V-set and transmembrane domain containing 1##DQ479398|TARM1|441864|T cell-interacting, activating receptor on myeloid cells 1##NM_001135686|TARM1|441864|T cell-interacting, activating receptor on myeloid cells 1##AF391163|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF474153|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##DQ893697|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##DQ894733|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF391162|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK091111|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK311307|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK130199|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF391164|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF474152|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF251702|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_130771|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_133168|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_133169|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_206818|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor	0.949864	CTCF.p2:12:0.932
chr4	65024563	65024698	reg1012089.p1	10.602	+	NM_015236	-2661792	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-2957655	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-7048062	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	250466	-	AK307826 NM_004439 NM_182472	1511022	-	TSC_hg19_v1_chr4_-_66536182 AB209375	1511567	-	NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.726519	CTCF.p2:10:0.727
chr19	49804638	49804748	reg1010211.p1	10.601	+	AK000048 TSC_hg19_v1_chr19_+_49669495	-135243	+	TSC_hg19_v1_chr19_+_49661048 AK074664 AF497623 AK292862 AY297044 AY297045 AY297046 AY046396 AJ575813 BC132727 BC144122 BC144123 AK295820	-143627	+	AK307897 NM_001195227 NM_017636 TSC_hg19_v1_chr19_+_49661029	-143680	+	BC034948 BC039336 NM_014037	23760	-	TSC_hg19_v1_chr19_+_49838662 AK301016	33965	+	TSC_hg19_v1_chr19_+_49838683 NM_001040031 NM_001774 AK301328	33985	+	AK000048|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AF497623|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK292862|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297044|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297045|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297046|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY046396|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AJ575813|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC132727|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144122|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144123|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK295820|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK307897|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_001195227|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_017636|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC034948|SLC6A16|28968|solute carrier family 6, member 16##NM_014037|SLC6A16|28968|solute carrier family 6, member 16##AK301016|CD37|951|CD37 molecule##NM_001040031|CD37|951|CD37 molecule##NM_001774|CD37|951|CD37 molecule##AK301328|CD37|951|CD37 molecule	0.99904	CTCF.p2:15:0.999
chr21	16237041	16237194	reg1008429.p2	10.601	+	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	-318468	-	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-481644	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-648620	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	200100	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	865208	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	865424	+	BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25	0.0	
chr9	99090168	99090286	reg1009305.p1	10.601	+	BT019371 CR541894 CU689848 DQ891812 DQ894995 BC034281 NM_000197 U05659	-25818	-	TSC_hg19_v1_chr9_-_98638262 AF194971 AL389954	-451904	-	NM_001010895 TSC_hg19_v1_chr9_+_98637942 AK129624 AK308409 AL389953	-452286	+	TSC_hg19_v1_chr9_-_99145966 HQ258608 AB106537 AB122077 AK307890 BC100278	55704	-	NM_007001 TSC_hg19_v1_chr9_-_99145994 BC113579	55793	-	BC126141 TSC_hg19_v1_chr9_-_99180642	90369	-	BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##AF194971|LINC00476|100128782|long intergenic non-protein coding RNA 476##AL389954|LINC00476|100128782|long intergenic non-protein coding RNA 476##NM_001010895|C9orf102|375748|chromosome 9 open reading frame 102##AK308409|C9orf102|375748|chromosome 9 open reading frame 102##AL389953|C9orf102|375748|chromosome 9 open reading frame 102##HQ258608|SLC35D2|11046|solute carrier family 35, member D2##AB106537|SLC35D2|11046|solute carrier family 35, member D2##AB122077|SLC35D2|11046|solute carrier family 35, member D2##AK307890|SLC35D2|11046|solute carrier family 35, member D2##BC100278|SLC35D2|11046|solute carrier family 35, member D2##NM_007001|SLC35D2|11046|solute carrier family 35, member D2##BC113579|SLC35D2|11046|solute carrier family 35, member D2##BC126141|ZNF367|195828|zinc finger protein 367	0.058131	
chr1	173400450	173400591	reg1012030.p1	10.599	+	CR542033 D90224 X79929 NM_003326	-224128	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	-225867	-	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	-380464	-	TSC_hg19_v1_chr1_-_173446300 AK127238	45788	-	TSC_hg19_v1_chr1_+_173446473 AK300680	45953	+	TSC_hg19_v1_chr1_+_173446484 BC035857 NM_004905 AK289352 BC025421 D14662 BC053550 CU690218 AJ844621	46007	+	CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK127238|LOC100506023|100506023|uncharacterized LOC100506023##AK300680|PRDX6|9588|peroxiredoxin 6##BC035857|PRDX6|9588|peroxiredoxin 6##NM_004905|PRDX6|9588|peroxiredoxin 6##AK289352|PRDX6|9588|peroxiredoxin 6##BC025421|PRDX6|9588|peroxiredoxin 6##D14662|PRDX6|9588|peroxiredoxin 6##BC053550|PRDX6|9588|peroxiredoxin 6##AJ844621|PRDX6|9588|peroxiredoxin 6	0.944691	CTCF.p2:-10:0.945
chr4	157889773	157889901	reg1007626.p1	10.599	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	-1014789	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	-1064960	+	AB528059 AJ252011 NM_017419	-1102437	-	AB590688 BC051876 BC094746 AF260738 AK300480 AF244813 AK313817 BC041783 BC065490 TSC_hg19_v1_chr4_-_157892334 AM922296 AB033831	2380	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	2641	-	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	2722	-	BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##BC051876|PDGFC|56034|platelet derived growth factor C##BC094746|PDGFC|56034|platelet derived growth factor C##AF260738|PDGFC|56034|platelet derived growth factor C##AK300480|PDGFC|56034|platelet derived growth factor C##AF244813|PDGFC|56034|platelet derived growth factor C##AK313817|PDGFC|56034|platelet derived growth factor C##BC041783|PDGFC|56034|platelet derived growth factor C##AM922296|PDGFC|56034|platelet derived growth factor C##AB033831|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C	0.572871	CTCF.p2:-3:0.573
chr7	3105446	3105585	reg1011321.p1	10.599	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	-22053	-	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-221707	-	AK289723 AB075830 BC146753 NM_133463	-386357	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	235484	+	TSC_hg19_v1_chr7_+_4721925 NM_001037165	1616323	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	1616736	+	AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##NM_001037165|FOXK1|221937|forkhead box K1##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1	0.928478	CTCF.p2:-13:0.474	CTCF.p2:-14:0.454
chr10	46527021	46527142	reg1012713.p1	10.598	+	BC171820 BC171833 AF411132 NM_133446	-184168	-	NM_001169106 NM_001169107 NM_015262 TSC_hg19_v1_chr10_+_46222703 AK291430 AB011164 BC150611 AK303048 AK293929 BC053887	-304374	+	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	-358867	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	92915	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	113607	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	113940	-	BC171833|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##AF411132|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##NM_133446|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##NM_001169106|FAM21C|253725|family with sequence similarity 21, member C##NM_001169107|FAM21C|253725|family with sequence similarity 21, member C##NM_015262|FAM21C|253725|family with sequence similarity 21, member C##AK291430|FAM21C|253725|family with sequence similarity 21, member C##AB011164|FAM21C|253725|family with sequence similarity 21, member C##BC150611|FAM21C|253725|family with sequence similarity 21, member C##AK303048|FAM21C|253725|family with sequence similarity 21, member C##AK293929|FAM21C|253725|family with sequence similarity 21, member C##BC053887|FAM21C|253725|family with sequence similarity 21, member C##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	0.977962	CTCF.p2:3:0.978
chr22	32662272	32662389	reg1009824.p1	10.598	+	NM_014227 AB527216 AJ133127	-11013	-	BC051910 NM_001159545	-61613	-	AK055999 NM_001098527	-62867	-	BC031689 NM_006604	88541	+	AJ010232 NM_001098535 BC069753 CR456564 AB463217 CU013164 CU013452 CU689230 EU446766 EU831788 EU831866	91668	+	CR457175 CU677691 CU678324 AB527121 CU013001 CU013289 DQ890931 DQ894092 CR456450 BC000151 BC002970 AL050255 TSC_hg19_v1_chr22_-_32808224 BC010308 AF155658	145855	-	NM_014227|SLC5A4|6527|solute carrier family 5 (low affinity glucose cotransporter), member 4##AJ133127|SLC5A4|6527|solute carrier family 5 (low affinity glucose cotransporter), member 4##BC051910|RFPL2|10739|ret finger protein-like 2##NM_001159545|RFPL2|10739|ret finger protein-like 2##AK055999|RFPL2|10739|ret finger protein-like 2##NM_001098527|RFPL2|10739|ret finger protein-like 2##BC031689|RFPL3|10738|ret finger protein-like 3##NM_006604|RFPL3|10738|ret finger protein-like 3##AJ010232|RFPL3|10738|ret finger protein-like 3##NM_001098535|RFPL3|10738|ret finger protein-like 3##BC069753|RFPL3|10738|ret finger protein-like 3##CR456564|RFPL3|10738|ret finger protein-like 3##CU013164|RFPL3|10738|ret finger protein-like 3##CU013452|RFPL3|10738|ret finger protein-like 3##EU446766|RFPL3|10738|ret finger protein-like 3##EU831788|RFPL3|10738|ret finger protein-like 3##EU831866|RFPL3|10738|ret finger protein-like 3##CR457175|C22orf28|51493|chromosome 22 open reading frame 28##DQ890931|C22orf28|51493|chromosome 22 open reading frame 28##DQ894092|C22orf28|51493|chromosome 22 open reading frame 28##CR456450|C22orf28|51493|chromosome 22 open reading frame 28##BC000151|C22orf28|51493|chromosome 22 open reading frame 28##BC002970|C22orf28|51493|chromosome 22 open reading frame 28##AL050255|C22orf28|51493|chromosome 22 open reading frame 28##BC010308|C22orf28|51493|chromosome 22 open reading frame 28##AF155658|C22orf28|51493|chromosome 22 open reading frame 28	0.914555	CTCF.p2:10:0.915
chr4	38858433	38858572	reg1009574.p2	10.598	+	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	-74	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	-52083	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	-73903	-	TSC_hg19_v1_chr4_+_38869390 NM_138389 AK304050 AK296859 AK292831 BC040452	10889	+	BC030803 BC060512 AK026888 NM_024943	175508	-	TSC_hg19_v1_chr4_+_39046535 NM_001007075 NM_001171654 BC053860 AB208820	187936	+	AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##NM_138389|FAM114A1|92689|family with sequence similarity 114, member A1##AK304050|FAM114A1|92689|family with sequence similarity 114, member A1##AK296859|FAM114A1|92689|family with sequence similarity 114, member A1##AK292831|FAM114A1|92689|family with sequence similarity 114, member A1##BC040452|FAM114A1|92689|family with sequence similarity 114, member A1##BC030803|TMEM156|80008|transmembrane protein 156##BC060512|TMEM156|80008|transmembrane protein 156##AK026888|TMEM156|80008|transmembrane protein 156##NM_024943|TMEM156|80008|transmembrane protein 156##NM_001007075|KLHL5|51088|kelch-like 5 (Drosophila)##NM_001171654|KLHL5|51088|kelch-like 5 (Drosophila)##BC053860|KLHL5|51088|kelch-like 5 (Drosophila)##AB208820|KLHL5|51088|kelch-like 5 (Drosophila)	0.987597	CTCF.p2:6:0.988
chr20	1745194	1745318	reg1011256.p1	10.597	+	AY748247 AY748248 CU687894 BC064532 BC020629 AK292745 NM_001039508 NM_018556 NM_080816	-106865	-	AB590891 CU692960 BC131747 Y10376 BC025286 BC075835 TSC_hg19_v1_chr20_-_1600656 AK289866 AK313517 BX537992 NM_001083910 NM_001135844 NM_006065	-144618	-	DQ891297 EU176577 BC033502 NM_178460	-206934	-	TSC_hg19_v1_chr20_+_1874780 NM_001040022	129540	+	TSC_hg19_v1_chr20_+_1874954 BC075849 AK290776	129733	+	TSC_hg19_v1_chr20_+_1875136 AK298243	129878	+	AY748247|SIRPG|55423|signal-regulatory protein gamma##AY748248|SIRPG|55423|signal-regulatory protein gamma##BC064532|SIRPG|55423|signal-regulatory protein gamma##BC020629|SIRPG|55423|signal-regulatory protein gamma##AK292745|SIRPG|55423|signal-regulatory protein gamma##NM_001039508|SIRPG|55423|signal-regulatory protein gamma##NM_018556|SIRPG|55423|signal-regulatory protein gamma##NM_080816|SIRPG|55423|signal-regulatory protein gamma##BC131747|SIRPB1|10326|signal-regulatory protein beta 1##Y10376|SIRPB1|10326|signal-regulatory protein beta 1##BC025286|SIRPB1|10326|signal-regulatory protein beta 1##BC075835|SIRPB1|10326|signal-regulatory protein beta 1##AK289866|SIRPB1|10326|signal-regulatory protein beta 1##BX537992|SIRPB1|10326|signal-regulatory protein beta 1##NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1##NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1##NM_006065|SIRPB1|10326|signal-regulatory protein beta 1##DQ891297|SIRPD|128646|signal-regulatory protein delta##EU176577|SIRPD|128646|signal-regulatory protein delta##BC033502|SIRPD|128646|signal-regulatory protein delta##NM_178460|SIRPD|128646|signal-regulatory protein delta##NM_001040022|SIRPA|140885|signal-regulatory protein alpha##BC075849|SIRPA|140885|signal-regulatory protein alpha##AK290776|SIRPA|140885|signal-regulatory protein alpha##AK298243|SIRPA|140885|signal-regulatory protein alpha	0.969103	CTCF.p2:12:0.969
chr1	4886272	4886388	reg1009810.p1	10.596	+	AY282806 NM_001042478 NM_018836	-171226	+	TSC_hg19_v1_chr1_+_4714668 AF175409	-171601	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-1069485	-	NM_001199861	1166027	+	TSC_hg19_v1_chr1_-_6052456 AY118228	1166115	-	TSC_hg19_v1_chr1_-_6052507 AK124074 AK314326 AF537130 BC040520 NM_015102	1166179	-	AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##AF175409|AJAP1|55966|adherens junctions associated protein 1##BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AY118228|NPHP4|261734|nephronophthisis 4##AK124074|NPHP4|261734|nephronophthisis 4##AK314326|NPHP4|261734|nephronophthisis 4##AF537130|NPHP4|261734|nephronophthisis 4##BC040520|NPHP4|261734|nephronophthisis 4##NM_015102|NPHP4|261734|nephronophthisis 4	0.866262	CTCF.p2:-1:0.866
chr18	51970830	51970949	reg1011433.p1	10.595	+	BX640877 NM_173529	-85719	+	AB528241 AF480305 NM_139171	-89947	-	NM_007195 TSC_hg19_v1_chr18_+_51795943 AK301578 AF140501 BC032617 BC032662 AL136670 AF245438 AK093688 AB463184 AM392978 DQ890893 DQ896811 CU689468	-174949	+	AK096425 NM_173629	287500	+	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	524849	+	AK058097 NM_001143829	654389	-	BX640877|C18orf54|162681|chromosome 18 open reading frame 54##NM_173529|C18orf54|162681|chromosome 18 open reading frame 54##AF480305|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_139171|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_007195|POLI|11201|polymerase (DNA directed) iota##AK301578|POLI|11201|polymerase (DNA directed) iota##AF140501|POLI|11201|polymerase (DNA directed) iota##BC032617|POLI|11201|polymerase (DNA directed) iota##BC032662|POLI|11201|polymerase (DNA directed) iota##AL136670|POLI|11201|polymerase (DNA directed) iota##AF245438|POLI|11201|polymerase (DNA directed) iota##AK093688|POLI|11201|polymerase (DNA directed) iota##AM392978|POLI|11201|polymerase (DNA directed) iota##DQ890893|POLI|11201|polymerase (DNA directed) iota##DQ896811|POLI|11201|polymerase (DNA directed) iota##AK096425|C18orf26|284254|chromosome 18 open reading frame 26##NM_173629|C18orf26|284254|chromosome 18 open reading frame 26##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family##AK058097|CCDC68|80323|coiled-coil domain containing 68##NM_001143829|CCDC68|80323|coiled-coil domain containing 68	0.010419	
chr4	114873722	114873857	reg1010082.p2	10.595	+	TSC_hg19_v1_chr4_-_114682923 NM_001221 NM_172114 NM_172115 NM_172127 NM_172128 NM_172129	-190819	-	TSC_hg19_v1_chr4_-_114682619 AK055642 AB209288	-191133	-	BC022558 TSC_hg19_v1_chr4_-_114682567	-191223	-	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	27050	-	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	645794	+	NM_003360 U30930	669733	+	NM_001221|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172114|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172115|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172127|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172128|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172129|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK055642|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AB209288|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC022558|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8	0.530816	CTCF.p2:0:0.531
chr1	154244756	154244892	reg1009672.p1	10.594	+	TSC_hg19_v1_chr1_+_154193769 AK124294	-51039	+	TSC_hg19_v1_chr1_+_154193430 NM_014847 AK302662 AK303533 AJ243668 BC001957	-51450	+	TSC_hg19_v1_chr1_-_154193073 BC000152 AF077036 BC088353 AJ243663 BC006514 NM_001098616 NM_015449 NM_138740	-51652	-	BC005240 NM_001018837 NM_006118 U68566 TSC_hg19_v1_chr1_+_154245078	209	+	AK300676 TSC_hg19_v1_chr1_+_154245084 AK313291 BC016730 EU190982 AK294298 AK290626 AK310000 BC014314 AK311450 EU190983	281	+	TSC_hg19_v1_chr1_+_154245134 BC015209 AB463719 CU677241 CU677697	341	+	AK124294|UBAP2L|9898|ubiquitin associated protein 2-like##NM_014847|UBAP2L|9898|ubiquitin associated protein 2-like##AK302662|UBAP2L|9898|ubiquitin associated protein 2-like##AK303533|UBAP2L|9898|ubiquitin associated protein 2-like##AJ243668|UBAP2L|9898|ubiquitin associated protein 2-like##BC000152|C1orf43|25912|chromosome 1 open reading frame 43##AF077036|C1orf43|25912|chromosome 1 open reading frame 43##BC088353|C1orf43|25912|chromosome 1 open reading frame 43##AJ243663|C1orf43|25912|chromosome 1 open reading frame 43##BC006514|C1orf43|25912|chromosome 1 open reading frame 43##NM_001098616|C1orf43|25912|chromosome 1 open reading frame 43##NM_015449|C1orf43|25912|chromosome 1 open reading frame 43##NM_138740|C1orf43|25912|chromosome 1 open reading frame 43##BC005240|HAX1|10456|HCLS1 associated protein X-1##NM_001018837|HAX1|10456|HCLS1 associated protein X-1##NM_006118|HAX1|10456|HCLS1 associated protein X-1##U68566|HAX1|10456|HCLS1 associated protein X-1##AK300676|HAX1|10456|HCLS1 associated protein X-1##AK313291|HAX1|10456|HCLS1 associated protein X-1##BC016730|HAX1|10456|HCLS1 associated protein X-1##EU190982|HAX1|10456|HCLS1 associated protein X-1##AK294298|HAX1|10456|HCLS1 associated protein X-1##AK290626|HAX1|10456|HCLS1 associated protein X-1##AK310000|HAX1|10456|HCLS1 associated protein X-1##BC014314|HAX1|10456|HCLS1 associated protein X-1##AK311450|HAX1|10456|HCLS1 associated protein X-1##EU190983|HAX1|10456|HCLS1 associated protein X-1##BC015209|HAX1|10456|HCLS1 associated protein X-1	1.230228	CTCF.p2:-3:0.985	CTCF.p2:20:0.245
chr1	222966231	222966368	reg1011769.p1	10.594	+	AK125494 NM_207468	-55742	+	TSC_hg19_v1_chr1_+_222886732 AK315930 AK293974	-79566	+	TSC_hg19_v1_chr1_+_222886714 AK304445	-79611	+	TSC_hg19_v1_chr1_+_222988422 NM_032890	22092	+	TSC_hg19_v1_chr1_-_223316591 NM_003268	350307	-	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	571172	-	AK125494|FAM177B|400823|family with sequence similarity 177, member B##NM_207468|FAM177B|400823|family with sequence similarity 177, member B##AK315930|BROX|148362|BRO1 domain and CAAX motif containing##AK293974|BROX|148362|BRO1 domain and CAAX motif containing##AK304445|BROX|148362|BRO1 domain and CAAX motif containing##NM_032890|DISP1|84976|dispatched homolog 1 (Drosophila)##NM_003268|TLR5|7100|toll-like receptor 5##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4	0.199585	
chr17	20896316	20896424	reg1009310.p1	10.594	+	CU686685 BC068597 NM_001004306	-96978	-	AK057473 TSC_hg19_v1_chr17_+_20771859 BC041488 EF565107	-124565	+	NM_001190790	-413334	+	TSC_hg19_v1_chr17_-_20946322 AB590105 AB028986 NM_015276	49902	-	TSC_hg19_v1_chr17_+_20978860 AB593144	82511	+	TSC_hg19_v1_chr17_+_21030251 NM_015510 AL117567 AF151851 BC004126 BC009679 AK124055 CR457124	133906	+	BC068597|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001004306|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2##AB028986|USP22|23326|ubiquitin specific peptidase 22##NM_015276|USP22|23326|ubiquitin specific peptidase 22##NM_015510|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AL117567|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AF151851|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC004126|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC009679|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AK124055|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##CR457124|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	0.9901	CTCF.p2:7:0.990
chr2	175387368	175387528	reg1012138.p1	10.594	+	BC036681 AK091200 AK315125 AX746845 BC028730 AL834154 TSC_hg19_v1_chr2_-_175351812 AK307896 BX537947 NM_001033045 NM_152529 BC035037	-35651	-	BC119684 BC119685 BC119685 TSC_hg19_v1_chr2_+_175260519	-126890	+	TSC_hg19_v1_chr2_+_175260466 NM_001193528 NM_024583 AK296558 AK295357 AK295357 AK057912 AK057912 BC007344	-126971	+	TSC_hg19_v1_chr2_-_175462533 BC002914 X86019	75033	-	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	111849	-	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	160306	-	BC036681|GPR155|151556|G protein-coupled receptor 155##AK091200|GPR155|151556|G protein-coupled receptor 155##AK315125|GPR155|151556|G protein-coupled receptor 155##BC028730|GPR155|151556|G protein-coupled receptor 155##AL834154|GPR155|151556|G protein-coupled receptor 155##AK307896|GPR155|151556|G protein-coupled receptor 155##BX537947|GPR155|151556|G protein-coupled receptor 155##NM_001033045|GPR155|151556|G protein-coupled receptor 155##NM_152529|GPR155|151556|G protein-coupled receptor 155##BC035037|GPR155|151556|G protein-coupled receptor 155##BC119684|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##NM_001193528|SCRN3|79634|secernin 3##NM_024583|SCRN3|79634|secernin 3##AK296558|SCRN3|79634|secernin 3##AK295357|SCRN3|79634|secernin 3##AK295357|SCRN3|79634|secernin 3##AK057912|SCRN3|79634|secernin 3##AK057912|SCRN3|79634|secernin 3##BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1##X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1##AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1	0.096673	
chr4	110748018	110748150	reg1010644.p1	10.594	+	TSC_hg19_v1_chr4_+_110736921 AK310489	-11137	+	TSC_hg19_v1_chr4_+_110736670 BC003413 NM_018983 NM_032993 AJ276003	-11412	+	NM_000204 TSC_hg19_v1_chr4_-_110723352	-24739	-	NM_006583 BC128120 BC128121 BC128401	1069	+	AK126648 NM_198506	24401	+	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	85963	+	AK310489|GAR1|54433|GAR1 ribonucleoprotein homolog (yeast)##BC003413|GAR1|54433|GAR1 ribonucleoprotein homolog (yeast)##NM_018983|GAR1|54433|GAR1 ribonucleoprotein homolog (yeast)##NM_032993|GAR1|54433|GAR1 ribonucleoprotein homolog (yeast)##AJ276003|GAR1|54433|GAR1 ribonucleoprotein homolog (yeast)##NM_000204|CFI|3426|complement factor I##NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##AK126648|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_198506|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor	0.608016	CTCF.p2:-9:0.608
chr16	30154519	30154656	reg1012038.p1	10.593	+	TSC_hg19_v1_chr16_-_30134584 NM_001040056 NM_001109891 NM_002746	-19970	-	AB385073 AY033607 AY033608 DQ399291 DQ893440 DQ896778 TSC_hg19_v1_chr16_-_30134542 BC013992 AK307995	-20048	-	TSC_hg19_v1_chr16_-_30134504 BX537897 AK091009 Z11696 M84490	-20193	-	NM_001193333 NM_007074 TSC_hg19_v1_chr16_+_30194922 BC110374	40239	+	AF495470 AK096332 TSC_hg19_v1_chr16_+_30194929 AK296207 AK314714 D44497 X89109 U34690 BC126385 BC126387	40388	+	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	50606	+	NM_001040056|MAPK3|5595|mitogen-activated protein kinase 3##NM_001109891|MAPK3|5595|mitogen-activated protein kinase 3##NM_002746|MAPK3|5595|mitogen-activated protein kinase 3##AY033607|MAPK3|5595|mitogen-activated protein kinase 3##AY033608|MAPK3|5595|mitogen-activated protein kinase 3##DQ399291|MAPK3|5595|mitogen-activated protein kinase 3##DQ893440|MAPK3|5595|mitogen-activated protein kinase 3##DQ896778|MAPK3|5595|mitogen-activated protein kinase 3##BC013992|MAPK3|5595|mitogen-activated protein kinase 3##AK307995|MAPK3|5595|mitogen-activated protein kinase 3##BX537897|MAPK3|5595|mitogen-activated protein kinase 3##AK091009|MAPK3|5595|mitogen-activated protein kinase 3##Z11696|MAPK3|5595|mitogen-activated protein kinase 3##M84490|MAPK3|5595|mitogen-activated protein kinase 3##NM_001193333|CORO1A|11151|coronin, actin binding protein, 1A##NM_007074|CORO1A|11151|coronin, actin binding protein, 1A##BC110374|CORO1A|11151|coronin, actin binding protein, 1A##AF495470|CORO1A|11151|coronin, actin binding protein, 1A##AK096332|CORO1A|11151|coronin, actin binding protein, 1A##AK296207|CORO1A|11151|coronin, actin binding protein, 1A##AK314714|CORO1A|11151|coronin, actin binding protein, 1A##D44497|CORO1A|11151|coronin, actin binding protein, 1A##X89109|CORO1A|11151|coronin, actin binding protein, 1A##U34690|CORO1A|11151|coronin, actin binding protein, 1A##BC126385|CORO1A|11151|coronin, actin binding protein, 1A##BC126387|CORO1A|11151|coronin, actin binding protein, 1A##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)	0.015509	
chr3	190415121	190415256	reg1013064.p1	10.593	+	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	-183311	+	CU687168 BC071780 AY358607 NM_207316	-247558	-	AK314955 NM_006580	-309528	+	NM_001146686	165276	-	AY398681 AY573933 BC128106 BC128107 NM_198184	515133	+	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	631978	+	NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207##AK314955|CLDN16|10686|claudin 16##NM_006580|CLDN16|10686|claudin 16##NM_001146686|GMNC|647309|geminin coiled-coil domain containing##AY398681|OSTN|344901|osteocrin##AY573933|OSTN|344901|osteocrin##BC128106|OSTN|344901|osteocrin##BC128107|OSTN|344901|osteocrin##NM_198184|OSTN|344901|osteocrin##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50	0.654875	CTCF.p2:-1:0.655
chr16	87802919	87803041	reg1010324.p1	10.592	+	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	-3410	-	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	-3465	-	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	-166270	+	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	100095	-	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	167167	-	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	182188	+	BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##BC001044|KLHDC4|54758|kelch domain containing 4##DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3##DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein	0.149469	
chr20	56754721	56754824	reg1008269.p2	10.592	+	NM_178456 BC035405	-28785	+	NM_199171	-468232	-	TSC_hg19_v1_chr20_-_56285634 BC080635 AF224278 AY128643 NM_199169 NM_199170 AX775887 AK296199	-469150	-	AK299330 AK057583 BC100979 BC100980 TSC_hg19_v1_chr20_-_56884511	129727	-	TSC_hg19_v1_chr20_+_56884770 NM_020673 BC063457 AF091034 AJ276210	130010	+	TSC_hg19_v1_chr20_+_56884847 BC015710	130072	+	NM_178456|C20orf85|128602|chromosome 20 open reading frame 85##BC035405|C20orf85|128602|chromosome 20 open reading frame 85##NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##BC080635|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AF224278|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AY128643|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199169|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199170|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK296199|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK299330|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##AK057583|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100979|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100980|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##NM_020673|RAB22A|57403|RAB22A, member RAS oncogene family##BC063457|RAB22A|57403|RAB22A, member RAS oncogene family##AF091034|RAB22A|57403|RAB22A, member RAS oncogene family##AJ276210|RAB22A|57403|RAB22A, member RAS oncogene family##BC015710|RAB22A|57403|RAB22A, member RAS oncogene family	0.999887	CTCF.p2:12:1.000
chr5	172878154	172878293	reg1012296.p1	10.592	+	AK095891 NM_003714	-121718	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	-122780	-	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	-122961	-	BC003114 TSC_hg19_v1_chr5_-_173043602	165374	-	TSC_hg19_v1_chr5_-_173043624 AK301982	165405	-	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	165450	-	AK095891|STC2|8614|stanniocalcin 2##NM_003714|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1	0.019797	
chrX	128890477	128890597	reg1012947.p1	10.592	+	AK300954 U90724 NM_003399 BC126174 BC143901	-17561	+	BC021104 NM_017413	-101615	-	TSC_hg19_v1_chrX_+_128674247 AK226116 BC094726 NM_000276 NM_001587 U57627 AK293107 BC130612 BC144106 BC025253 AB384825	-216239	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	23350	+	TSC_hg19_v1_chrX_+_128913898 AK314869 AK292023 BC051881 AL049683 AB528892	23447	+	AK001524 BC000035 AB209807 TSC_hg19_v1_chrX_-_128977481 NM_001008222	86888	-	AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC021104|APLN|8862|apelin##NM_017413|APLN|8862|apelin##AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe##U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe##AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3##AK314869|SASH3|54440|SAM and SH3 domain containing 3##AK292023|SASH3|54440|SAM and SH3 domain containing 3##BC051881|SASH3|54440|SAM and SH3 domain containing 3##AL049683|SASH3|54440|SAM and SH3 domain containing 3##AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9	0.563162	CTCF.p2:-17:0.563
chr12	38722253	38722375	reg1010345.p2	10.591	+	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-11689	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-4546841	+	TSC_hg19_v1_chr12_+_34175402 BC022336	-4546928	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	577069	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	1114685	-	AK314254 NM_005164	1291528	-	NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC022336|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2	0.967859	CTCF.p2:-2:0.968
chr19	13305455	13305601	reg1011420.p1	10.591	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-41348	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-44236	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-44389	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	311648	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	537051	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	553191	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.998913	CTCF.p2:-23:0.999
chr13	45945219	45945349	reg1009199.p1	10.590	+	AF318337 TSC_hg19_v1_chr13_+_45915726 AK124332	-29671	+	TSC_hg19_v1_chr13_-_45915319 AK130847 AK296587 AK296952 AK312951 AY117678 D28408 BC022436	-29920	-	BC012431 TSC_hg19_v1_chr13_-_45915280 X64899 BC040008 NM_003295 X16064 AF072098 BC007842 BC003352 BC052333	-29992	-	TSC_hg19_v1_chr13_-_45992456 BC129808	47176	-	TSC_hg19_v1_chr13_-_45992486 BC132739 BC136760 BC144401 AK094133 AK095465 AK302967 NM_001010875	47210	-	TSC_hg19_v1_chr13_+_46039081 NM_031431 AF349676 AF332595 AK026305 AK225466 AK225952 BX648211 AK294959 AK304248 AK314387 BC038953 CU691622	93813	+	AF318337|LOC100190939|100190939|uncharacterized LOC100190939##AK124332|LOC100190939|100190939|uncharacterized LOC100190939##AK130847|TPT1|7178|tumor protein, translationally-controlled 1##AK296587|TPT1|7178|tumor protein, translationally-controlled 1##AK296952|TPT1|7178|tumor protein, translationally-controlled 1##AK312951|TPT1|7178|tumor protein, translationally-controlled 1##AY117678|TPT1|7178|tumor protein, translationally-controlled 1##BC022436|TPT1|7178|tumor protein, translationally-controlled 1##BC012431|TPT1|7178|tumor protein, translationally-controlled 1##X64899|TPT1|7178|tumor protein, translationally-controlled 1##BC040008|TPT1|7178|tumor protein, translationally-controlled 1##NM_003295|TPT1|7178|tumor protein, translationally-controlled 1##X16064|TPT1|7178|tumor protein, translationally-controlled 1##BC007842|TPT1|7178|tumor protein, translationally-controlled 1##BC003352|TPT1|7178|tumor protein, translationally-controlled 1##BC052333|TPT1|7178|tumor protein, translationally-controlled 1##BC129808|SLC25A30|253512|solute carrier family 25, member 30##BC132739|SLC25A30|253512|solute carrier family 25, member 30##BC136760|SLC25A30|253512|solute carrier family 25, member 30##BC144401|SLC25A30|253512|solute carrier family 25, member 30##AK094133|SLC25A30|253512|solute carrier family 25, member 30##AK095465|SLC25A30|253512|solute carrier family 25, member 30##AK302967|SLC25A30|253512|solute carrier family 25, member 30##NM_001010875|SLC25A30|253512|solute carrier family 25, member 30##NM_031431|COG3|83548|component of oligomeric golgi complex 3##AF349676|COG3|83548|component of oligomeric golgi complex 3##AF332595|COG3|83548|component of oligomeric golgi complex 3##AK026305|COG3|83548|component of oligomeric golgi complex 3##AK225466|COG3|83548|component of oligomeric golgi complex 3##AK225952|COG3|83548|component of oligomeric golgi complex 3##BX648211|COG3|83548|component of oligomeric golgi complex 3##AK294959|COG3|83548|component of oligomeric golgi complex 3##AK304248|COG3|83548|component of oligomeric golgi complex 3##AK314387|COG3|83548|component of oligomeric golgi complex 3##BC038953|COG3|83548|component of oligomeric golgi complex 3	0.995369	CTCF.p2:-19:0.995
chr3	20381942	20382063	reg1009874.p1	10.590	+	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-154328	-	BC070075 TSC_hg19_v1_chr3_+_20081907 BC060823 AB527402	-300092	+	NM_003884 U57317	-300479	+	AK026072 NM_024697	1410813	-	AK310298 TSC_hg19_v1_chr3_-_22414124	2032132	-	TSC_hg19_v1_chr3_+_23244600 AK307075	2862581	+	AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC070075|KAT2B|8850|K(lysine) acetyltransferase 2B##BC060823|KAT2B|8850|K(lysine) acetyltransferase 2B##NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B##U57317|KAT2B|8850|K(lysine) acetyltransferase 2B##AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AK310298|ZNF385D|79750|zinc finger protein 385D##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2	0.998221	CTCF.p2:-5:0.998
chr6	118151172	118151299	reg1008528.p2	10.590	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-154569	+	BC110325 TSC_hg19_v1_chr6_+_117996661 BC063794	-154574	+	TSC_hg19_v1_chr6_+_117996651 BC150654 BC150655 AK125119	-154588	+	BC028615 NM_001029858 BC114925	77455	+	NM_002667 M63603 AK311799 BC005269	718230	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	821801	-	AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC110325|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC063794|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150654|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150655|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##AK125119|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like	0.0	
chr11	31663142	31663290	reg1011706.p1	10.589	+	AK000505 NM_019040 TSC_hg19_v1_chr11_+_31531319 AK304885 AL136677 DQ891468 DQ894651 BC012514 AB463022 AM393460 AM393857	-131903	+	AK311611 BC023595 TSC_hg19_v1_chr11_-_31531154 AK310496 AK057788 NM_144981	-132072	-	TSC_hg19_v1_chr11_+_31391404 NM_181706 AK123087 AL833128 AK289665 BC036571 BC044931 BC063804	-271814	+	AK094249 TSC_hg19_v1_chr11_-_31825606	162384	-	M77844 TSC_hg19_v1_chr11_-_31832670	169418	-	TSC_hg19_v1_chr11_-_31832761 M93650	169546	-	AK000505|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##NM_019040|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AK304885|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AL136677|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##DQ891468|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##DQ894651|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##BC012514|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AM393460|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AM393857|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AK311611|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC023595|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK310496|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK057788|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_144981|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_181706|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK123087|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AL833128|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK289665|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC036571|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC044931|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC063804|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK094249|PAX6|5080|paired box 6##M77844|PAX6|5080|paired box 6##M93650|PAX6|5080|paired box 6	0.755089	CTCF.p2:-2:0.755
chr14	103241331	103241471	reg1007825.p2	10.589	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-182240	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	-182403	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-265287	-	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	2418	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	2499	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	147597	+	AF155595|RCOR1|23186|REST corepressor 1##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)	0.884819	CTCF.p2:15:0.885
chr14	39191180	39191297	reg1011006.p1	10.589	+	AY358395 BX248017 NM_175060	-465682	-	AY573061 BC031567 TSC_hg19_v1_chr14_-_38725270 AY606132	-465954	-	AB384936 DQ893328 DQ896644 TSC_hg19_v1_chr14_+_38678642	-512619	+	AK293944 TSC_hg19_v1_chr14_-_39572386 AK312259 X97064	381106	-	TSC_hg19_v1_chr14_-_39572440 AK299862 BC036649 NM_006364 AK303485	381195	-	AF027150 NM_001009182 NM_001009183 NM_003616 BC028095 BC104968 AK313947 AB037701 AB037702 AB037703	392229	+	AY358395|CLEC14A|161198|C-type lectin domain family 14, member A##BX248017|CLEC14A|161198|C-type lectin domain family 14, member A##NM_175060|CLEC14A|161198|C-type lectin domain family 14, member A##AY573061|CLEC14A|161198|C-type lectin domain family 14, member A##BC031567|CLEC14A|161198|C-type lectin domain family 14, member A##AY606132|CLEC14A|161198|C-type lectin domain family 14, member A##DQ893328|SSTR1|6751|somatostatin receptor 1##DQ896644|SSTR1|6751|somatostatin receptor 1##AK293944|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK312259|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##X97064|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK299862|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##BC036649|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##NM_006364|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK303485|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AF027150|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_001009182|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_001009183|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_003616|GEMIN2|8487|gem (nuclear organelle) associated protein 2##BC028095|GEMIN2|8487|gem (nuclear organelle) associated protein 2##BC104968|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AK313947|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037701|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037702|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037703|GEMIN2|8487|gem (nuclear organelle) associated protein 2	0.749118	CTCF.p2:-3:0.749
chr6	140202935	140203044	reg1008376.p1	10.589	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-507205	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-507228	-	NM_001168389 NM_001168388	-507566	-	BC095542 GU727635 M73482 NM_002511	2206875	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	2265401	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	2265417	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.957678	CTCF.p2:5:0.958
chr7	148201149	148201265	reg1008839.p1	10.589	+	TSC_hg19_v1_chr7_+_148036552 CR933671	-164642	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-2387323	+	NM_014141	-2387755	+	BC021251 NM_145304	86449	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	194733	+	TSC_hg19_v1_chr7_+_148396012 BX537409	194797	+	CR933671|CNTNAP2|26047|contactin associated protein-like 2##AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1##BX537409|CUL1|8454|cullin 1	0.911945	CTCF.p2:-25:0.912
chr1	43388734	43388863	reg1010105.p1	10.588	+	TSC_hg19_v1_chr1_+_43312304 AK296201	-76493	+	AK095184 TSC_hg19_v1_chr1_+_43312290	-76509	+	TSC_hg19_v1_chr1_+_43312284 AF131739	-76525	+	AB384810 BC118590 BC121804 TSC_hg19_v1_chr1_-_43424504 K03195	35624	-	TSC_hg19_v1_chr1_-_43424540 AK292791 AK293306 AK296736 AK312403 AB208987	35774	-	TSC_hg19_v1_chr1_-_43424834 NM_006516	36042	-	AK296201|ZNF691|51058|zinc finger protein 691##AF131739|ZNF691|51058|zinc finger protein 691##BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##NM_006516|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	0.461765	CTCF.p2:-8:0.462
chr17	7464385	7464508	reg1010837.p2	10.587	+	AK225556 AK314518 AK301221 AF046888 AF114011 AY081050 AF114013 AF114012 AF184972 AY358880 BC008042 TSC_hg19_v1_chr17_+_7462318 DQ149579 EF211088 EU831984 EU832077 AF136294 BT019561 BT019562 CR542040 CR542073	-2236	+	TSC_hg19_v1_chr17_+_7461620 NM_001198622 NM_001198623 NM_001198624 NM_003808 NM_172087 NM_172088	-2830	+	BC019047 NM_003809 NM_172089 BC071837 AF055872 AY358870 AY081051 BC104420 AF030099	-12033	+	TSC_hg19_v1_chr17_+_7465295 NM_015670	850	+	TSC_hg19_v1_chr17_+_7465319 BC080658 AL834294 AF199459 AY008763	983	+	NM_001204510 NM_001416 TSC_hg19_v1_chr17_+_7476143 AK130082 AK291971 AK296664 AK303599 AK312630 D13748 AK289453 AK297916 AK303222 AK309274 BC009585 BC006210 BC073752 AB385527 CU679411 DQ893044 DQ896288 BT019880 BT019881 BC032078	11646	+	AK225556|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK314518|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK301221|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF046888|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114011|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AY081050|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114013|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114012|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF184972|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AY358880|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BC008042|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##DQ149579|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EF211088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EU831984|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EU832077|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF136294|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BT019561|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BT019562|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##CR542040|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##CR542073|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198622|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198623|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198624|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_003808|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_172087|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_172088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BC019047|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_003809|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_172089|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough##BC071837|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AF055872|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AY358870|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AY081051|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough##BC104420|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AF030099|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_015670|SENP3|26168|SUMO1/sentrin/SMT3 specific peptidase 3##BC080658|SENP3|26168|SUMO1/sentrin/SMT3 specific peptidase 3##AL834294|SENP3|26168|SUMO1/sentrin/SMT3 specific peptidase 3##AF199459|SENP3|26168|SUMO1/sentrin/SMT3 specific peptidase 3##AY008763|SENP3|26168|SUMO1/sentrin/SMT3 specific peptidase 3##NM_001204510|EIF4A1|1973|eukaryotic translation initiation factor 4A1##NM_001416|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK130082|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK291971|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK296664|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK303599|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK312630|EIF4A1|1973|eukaryotic translation initiation factor 4A1##D13748|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK289453|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK297916|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK303222|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK309274|EIF4A1|1973|eukaryotic translation initiation factor 4A1##BC009585|EIF4A1|1973|eukaryotic translation initiation factor 4A1##BC006210|EIF4A1|1973|eukaryotic translation initiation factor 4A1##BC073752|EIF4A1|1973|eukaryotic translation initiation factor 4A1##DQ893044|EIF4A1|1973|eukaryotic translation initiation factor 4A1##DQ896288|EIF4A1|1973|eukaryotic translation initiation factor 4A1##BT019880|EIF4A1|1973|eukaryotic translation initiation factor 4A1##BT019881|EIF4A1|1973|eukaryotic translation initiation factor 4A1##BC032078|EIF4A1|1973|eukaryotic translation initiation factor 4A1	1.038332	CTCF.p2:15:0.937
chr12	56586881	56587000	reg1009423.p1	10.585	+	TSC_hg19_v1_chr12_-_56583357 AB209006 NM_001130420 NM_003075 NM_139067	-3593	-	AB384911 BT009924 EU176256 AK315153 TSC_hg19_v1_chr12_-_56583268 BC026222 AK293896 AB209293 U66616 BC013045	-3668	-	TSC_hg19_v1_chr12_-_56563972 BC009067	-22963	-	NM_001242826 BC011626 BC095418 TSC_hg19_v1_chr12_-_56615651 BC036267	28632	-	TSC_hg19_v1_chr12_-_56615718 BC024284 AK300752 NM_005785 NM_194358 AK314811 AK304576 NM_194359	28785	-	TSC_hg19_v1_chr12_+_56618125 NM_024068	31183	+	AB209006|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_001130420|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_003075|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_139067|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##BT009924|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##EU176256|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##AK315153|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##BC026222|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##AK293896|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##AB209293|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##U66616|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##BC013045|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##BC009067|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_001242826|RNF41|10193|ring finger protein 41##BC011626|RNF41|10193|ring finger protein 41##BC095418|RNF41|10193|ring finger protein 41##BC036267|RNF41|10193|ring finger protein 41##BC024284|RNF41|10193|ring finger protein 41##AK300752|RNF41|10193|ring finger protein 41##NM_005785|RNF41|10193|ring finger protein 41##NM_194358|RNF41|10193|ring finger protein 41##AK314811|RNF41|10193|ring finger protein 41##AK304576|RNF41|10193|ring finger protein 41##NM_194359|RNF41|10193|ring finger protein 41##NM_024068|OBFC2B|79035|oligonucleotide/oligosaccharide-binding fold containing 2B	0.998804	CTCF.p2:-15:0.999
chr7	12107259	12107370	reg1010458.p1	10.585	+	TSC_hg19_v1_chr7_-_11871825 AK092252 AX747433 NM_015204	-235525	-	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	-1093804	+	AK130950 TSC_hg19_v1_chr7_-_10979760 AK024837 U94586 BC105295 NM_002489	-1127530	-	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	143611	+	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	336218	-	NM_001135924	336537	-	AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A##AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14##AK130950|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK024837|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##U94586|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC105295|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_002489|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains##NM_001135924|VWDE|221806|von Willebrand factor D and EGF domains	0.879163	CTCF.p2:-8:0.879
chr8	98572336	98572483	reg1007652.p1	10.585	+	TSC_hg19_v1_chr8_-_98290193 AK091445 AX746987	-282190	-	TSC_hg19_v1_chr8_-_98290171 BC045630 NM_033512	-282236	-	CU692280 AB384285 AB051537 TSC_hg19_v1_chr8_-_98290135	-282301	-	TSC_hg19_v1_chr8_+_98656416 BC045642 NM_178812 BC001815	83968	+	TSC_hg19_v1_chr8_+_98656437 BC014977 AF501310	84050	+	BC022825 TSC_hg19_v1_chr8_+_98656510 BC009324 AF411226 AY082966 AY974040	84204	+	AK091445|TSPYL5|85453|TSPY-like 5##BC045630|TSPYL5|85453|TSPY-like 5##NM_033512|TSPYL5|85453|TSPY-like 5##AB051537|TSPYL5|85453|TSPY-like 5##BC045642|MTDH|92140|metadherin##NM_178812|MTDH|92140|metadherin##BC001815|MTDH|92140|metadherin##BC014977|MTDH|92140|metadherin##AF501310|MTDH|92140|metadherin##BC022825|MTDH|92140|metadherin##BC009324|MTDH|92140|metadherin##AF411226|MTDH|92140|metadherin##AY082966|MTDH|92140|metadherin##AY974040|MTDH|92140|metadherin	0.999138	CTCF.p2:-19:0.999
chrX	137827522	137827660	reg1011556.p1	10.585	+	AF100144 NM_033642	-6077	-	BC012347 NM_004114 TSC_hg19_v1_chrX_-_137793839	-33754	-	AF100143 TSC_hg19_v1_chrX_-_137793504 AK289960 BC034340	-34137	-	NM_001139502	122125	-	AF108756 AK316170 TSC_hg19_v1_chrX_-_138286506	458879	-	AF199613 TSC_hg19_v1_chrX_-_138287166	459568	-	AF100144|FGF13|2258|fibroblast growth factor 13##NM_033642|FGF13|2258|fibroblast growth factor 13##BC012347|FGF13|2258|fibroblast growth factor 13##NM_004114|FGF13|2258|fibroblast growth factor 13##AF100143|FGF13|2258|fibroblast growth factor 13##AK289960|FGF13|2258|fibroblast growth factor 13##BC034340|FGF13|2258|fibroblast growth factor 13##NM_001139502|FGF13|2258|fibroblast growth factor 13##AF108756|FGF13|2258|fibroblast growth factor 13##AK316170|FGF13|2258|fibroblast growth factor 13##AF199613|FGF13|2258|fibroblast growth factor 13	0.985903	CTCF.p2:11:0.986
chr14	102529624	102529739	reg1009649.p1	10.584	+	TSC_hg19_v1_chr14_+_102430909 AB002323 AB527134	-98720	+	TSC_hg19_v1_chr14_+_102430876 AB290157 NM_001376 AK299878	-98853	+	AB451341 CU677587 D26445 AB463199 L42375 TSC_hg19_v1_chr14_+_102276338	-253372	+	TSC_hg19_v1_chr14_-_102553382 AJ890083 X07270 BC017233 BC001695 AK129557 AK291115 AK291607 AK300126 AK310595 BC121062 X15183	23683	-	TSC_hg19_v1_chr14_-_102553513 NM_005348	23825	-	TSC_hg19_v1_chr14_-_102606024 BX248761 AJ890082 AK056446 NM_001017963	76358	-	AB002323|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AB290157|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##NM_001376|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AK299878|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AB451341|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##D26445|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##L42375|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AJ890083|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##X07270|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC017233|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC001695|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK129557|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK291115|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK291607|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK300126|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK310595|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC121062|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##X15183|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##NM_005348|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BX248761|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AJ890082|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK056446|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##NM_001017963|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1	0.142778	
chr18	74923937	74924039	reg1009508.p2	10.583	+	TSC_hg19_v1_chr18_-_74844774 NM_001025100 NM_001025101	-79209	-	TSC_hg19_v1_chr18_-_74844720 BC065248 AB208986 L18865	-79271	-	TSC_hg19_v1_chr18_-_74729052 AK314553 NM_001025081 NM_001025090 NM_001025092 NM_002385 AK293922	-194921	-	TSC_hg19_v1_chr18_+_74961925 NM_001480	37978	+	BC016792 TSC_hg19_v1_chr18_-_75705702	781704	-	BC129827 BC148296 NM_171999	1816286	+	NM_001025100|MBP|4155|myelin basic protein##NM_001025101|MBP|4155|myelin basic protein##BC065248|MBP|4155|myelin basic protein##AB208986|MBP|4155|myelin basic protein##L18865|MBP|4155|myelin basic protein##AK314553|MBP|4155|myelin basic protein##NM_001025081|MBP|4155|myelin basic protein##NM_001025090|MBP|4155|myelin basic protein##NM_001025092|MBP|4155|myelin basic protein##NM_002385|MBP|4155|myelin basic protein##AK293922|MBP|4155|myelin basic protein##NM_001480|GALR1|2587|galanin receptor 1##BC148296|SALL3|27164|sal-like 3 (Drosophila)##NM_171999|SALL3|27164|sal-like 3 (Drosophila)	0.990943	CTCF.p2:11:0.991
chr7	30204244	30204361	reg1008979.p1	10.583	+	TSC_hg19_v1_chr7_+_30174621 NM_152793 AK096533 AL834391 AK098769 AB528783 AK294982	-29720	+	TSC_hg19_v1_chr7_+_30068250 BC002838 AF308300 AF380162 DQ893498 DQ896458 CU678236	-136011	+	TSC_hg19_v1_chr7_+_30068010 NM_001197026 NM_001197027 NM_032639 AK294857 BC053990 AK023180	-136301	+	AF513707 NM_147128	119620	+	TSC_hg19_v1_chr7_+_30324515 AF527533	120247	+	TSC_hg19_v1_chr7_+_30324634 AY054122	120354	+	NM_152793|C7orf41|222166|chromosome 7 open reading frame 41##AK096533|C7orf41|222166|chromosome 7 open reading frame 41##AL834391|C7orf41|222166|chromosome 7 open reading frame 41##AK098769|C7orf41|222166|chromosome 7 open reading frame 41##AK294982|C7orf41|222166|chromosome 7 open reading frame 41##BC002838|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF308300|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF380162|PLEKHA8P1|51054|pleckstrin homology domain containing, family A member 8 pseudogene 1##DQ893498|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##DQ896458|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197026|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197027|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_032639|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK294857|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##BC053990|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK023180|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF513707|ZNRF2|223082|zinc and ring finger 2##NM_147128|ZNRF2|223082|zinc and ring finger 2##AF527533|ZNRF2|223082|zinc and ring finger 2##AY054122|ZNRF2|223082|zinc and ring finger 2	0.629247	CTCF.p2:-13:0.629
chr9	117444468	117444579	reg1010213.p3	10.583	+	NM_001199233	-155	-	TSC_hg19_v1_chr9_+_117373735 NM_153045 AK289383 BC107133 BC107134 BX649023	-70754	+	TSC_hg19_v1_chr9_+_117350103 CU678965 CR456971 CR542237	-94416	+	AY434464 NM_001204344	110286	-	AB590753 AK291642 BC074940 BC074941 BC069435 AK313721 BC104462 BC104463 NM_005118 AF520785	123828	-	AK313619 NM_001244 NM_001252290	248351	-	NM_001199233|LOC100505478|100505478|uncharacterized LOC100505478##NM_153045|C9orf91|203197|chromosome 9 open reading frame 91##AK289383|C9orf91|203197|chromosome 9 open reading frame 91##BC107133|C9orf91|203197|chromosome 9 open reading frame 91##BC107134|C9orf91|203197|chromosome 9 open reading frame 91##BX649023|C9orf91|203197|chromosome 9 open reading frame 91##CR456971|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##CR542237|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##AY434464|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001204344|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK291642|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074940|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074941|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC069435|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313721|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104462|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104463|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_005118|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AF520785|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8	0.999806	CTCF.p2:-2:1.000
chr18	19024519	19024645	reg1009757.p2	10.582	+	TSC_hg19_v1_chr18_+_18822192 AB051559 NM_001142966 BC125017	-202339	+	TSC_hg19_v1_chr18_-_18691765 AK057038 NM_005406	-332794	-	TSC_hg19_v1_chr18_-_18691640 AK307388	-332944	-	TSC_hg19_v1_chr18_-_19180616 AB067498	156037	-	TSC_hg19_v1_chr18_-_19180666 NM_052911 AK096746	156096	-	TSC_hg19_v1_chr18_-_19180830 AL832041	156294	-	AB051559|GREB1L|80000|growth regulation by estrogen in breast cancer-like##NM_001142966|GREB1L|80000|growth regulation by estrogen in breast cancer-like##BC125017|GREB1L|80000|growth regulation by estrogen in breast cancer-like##AK057038|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##NM_005406|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AK307388|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AB067498|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##NM_052911|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##AK096746|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##AL832041|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)	0.890205	CTCF.p2:22:0.890
chr4	86291706	86291849	reg1011309.p1	10.582	+	NM_014991	-404234	-	NM_001263 U65887	-787684	+	NM_006168	-872391	-	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	104566	+	TSC_hg19_v1_chr4_+_86699850 NM_001042669	408071	+	BC098580 TSC_hg19_v1_chr4_+_86699865 AK098193	408121	+	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_006168|NKX6-1|4825|NK6 homeobox 1##NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24##NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24##BC098580|ARHGAP24|83478|Rho GTPase activating protein 24##AK098193|ARHGAP24|83478|Rho GTPase activating protein 24	0.998503	CTCF.p2:10:0.999
chr1	12289963	12290074	reg1009866.p2	10.581	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	-62907	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	-62957	+	D86042 BC063482 NM_152942 BC073839 BC141804	-104002	+	TSC_hg19_v1_chr1_+_12290088 NM_015378 NM_018156 AJ608774 AJ608775 AL162331	89	+	TSC_hg19_v1_chr1_+_12403045 AK057675	113052	+	DQ426869 DQ893006 DQ896252 CU678154 AF061741 AK222593 BC002730 TSC_hg19_v1_chr1_-_12677700 AK310202 AY358093 AK309282 AK312961 BX648476 NM_004753	387565	-	AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_015378|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_018156|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608774|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608775|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AL162331|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AK057675|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	0.09944	
chr14	78017810	78017908	reg1009099.p1	10.581	+	BX248771 BX248277 BX248770 AK056709 AK291600 AK300214 BC101019 BC101020 BC101021 BC101022 CR749863 AJ583024 AK075445 NM_182509 NM_199296	-52705	-	TSC_hg19_v1_chr14_+_77924438 BC000321 AK313824 AF164791	-93417	+	TSC_hg19_v1_chr14_+_77924412 NM_012111 AK300766 AJ243310	-93469	+	CU675001 DQ893297 DQ896786 TSC_hg19_v1_chr14_-_78082949	65076	-	Y08686 TSC_hg19_v1_chr14_-_78082981 BC005123	65135	-	AB011098 NM_004863 TSC_hg19_v1_chr14_-_78083124	65267	-	BX248771|ISM2|145501|isthmin 2 homolog (zebrafish)##BX248277|ISM2|145501|isthmin 2 homolog (zebrafish)##BX248770|ISM2|145501|isthmin 2 homolog (zebrafish)##AK056709|ISM2|145501|isthmin 2 homolog (zebrafish)##AK291600|ISM2|145501|isthmin 2 homolog (zebrafish)##AK300214|ISM2|145501|isthmin 2 homolog (zebrafish)##BC101019|ISM2|145501|isthmin 2 homolog (zebrafish)##BC101020|ISM2|145501|isthmin 2 homolog (zebrafish)##BC101021|ISM2|145501|isthmin 2 homolog (zebrafish)##BC101022|ISM2|145501|isthmin 2 homolog (zebrafish)##CR749863|ISM2|145501|isthmin 2 homolog (zebrafish)##AJ583024|ISM2|145501|isthmin 2 homolog (zebrafish)##AK075445|ISM2|145501|isthmin 2 homolog (zebrafish)##NM_182509|ISM2|145501|isthmin 2 homolog (zebrafish)##NM_199296|ISM2|145501|isthmin 2 homolog (zebrafish)##BC000321|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##AK313824|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##AF164791|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##NM_012111|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##AK300766|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##AJ243310|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##DQ893297|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##DQ896786|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##Y08686|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##BC005123|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##AB011098|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##NM_004863|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2	0.98882	CTCF.p2:10:0.989
chr15	101548720	101548836	reg1009576.p2	10.581	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-89266	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-89304	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-128707	+	AB071402 TSC_hg19_v1_chr15_-_101791795	242958	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	243357	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	268885	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.991129	CTCF.p2:6:0.991
chr17	74295352	74295463	reg1009022.p2	10.581	+	TSC_hg19_v1_chr17_+_74261431 BC035511 EU176314	-33900	+	TSC_hg19_v1_chr17_+_74261282 BC060859 NM_182565	-34123	+	AK091467 AX747002 AB067504 NM_052916 TSC_hg19_v1_chr17_-_74236615	-58959	-	EU832276 EU832361 BC131559 AL136774 NM_032134	8263	-	TSC_hg19_v1_chr17_-_74349591 CU679229 BC009012	54242	-	TSC_hg19_v1_chr17_-_74349948 D61391 AK312637	54522	-	BC035511|FAM100B|283991|family with sequence similarity 100, member B##EU176314|FAM100B|283991|family with sequence similarity 100, member B##BC060859|FAM100B|283991|family with sequence similarity 100, member B##NM_182565|FAM100B|283991|family with sequence similarity 100, member B##AK091467|RNF157|114804|ring finger protein 157##AB067504|RNF157|114804|ring finger protein 157##NM_052916|RNF157|114804|ring finger protein 157##EU832276|QRICH2|84074|glutamine rich 2##EU832361|QRICH2|84074|glutamine rich 2##BC131559|QRICH2|84074|glutamine rich 2##AL136774|QRICH2|84074|glutamine rich 2##NM_032134|QRICH2|84074|glutamine rich 2##BC009012|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1##D61391|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1##AK312637|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1	0.994548	CTCF.p2:3:0.995
chr2	113961607	113961739	reg1009580.p1	10.581	+	TSC_hg19_v1_chr2_+_113931576 BC035307 BC073151	-30092	+	AK290045 TSC_hg19_v1_chr2_+_113931556 AB208798 NM_012455	-30119	+	TSC_hg19_v1_chr2_+_113885174 AK290926 X52015 X53296 AB529162	-76469	+	TSC_hg19_v1_chr2_+_113993123 AK056052 AK307781 BX537688 AK056355 AK130275	31597	+	S77904 S77905 S77906 X69699 BC001060 AK292191 AK309154 AK225538 NM_003466 NM_013952 NM_013953 NM_013992 TSC_hg19_v1_chr2_-_114036499	74820	-	AK290072 NM_172003 AK303653 AY343910 TSC_hg19_v1_chr2_+_114195398 AY320414 BC120991 BC120992 AK225251 AF452722	233666	+	BC035307|PSD4|23550|pleckstrin and Sec7 domain containing 4##BC073151|PSD4|23550|pleckstrin and Sec7 domain containing 4##AK290045|PSD4|23550|pleckstrin and Sec7 domain containing 4##AB208798|PSD4|23550|pleckstrin and Sec7 domain containing 4##NM_012455|PSD4|23550|pleckstrin and Sec7 domain containing 4##AK290926|IL1RN|3557|interleukin 1 receptor antagonist##X52015|IL1RN|3557|interleukin 1 receptor antagonist##X53296|IL1RN|3557|interleukin 1 receptor antagonist##AK056052|LOC654433|654433|uncharacterized LOC654433##AK307781|LOC654433|654433|uncharacterized LOC654433##BX537688|LOC654433|654433|uncharacterized LOC654433##AK056355|LOC654433|654433|uncharacterized LOC654433##AK130275|LOC654433|654433|uncharacterized LOC654433##S77904|PAX8|7849|paired box 8##S77905|PAX8|7849|paired box 8##S77906|PAX8|7849|paired box 8##X69699|PAX8|7849|paired box 8##BC001060|PAX8|7849|paired box 8##AK292191|PAX8|7849|paired box 8##AK309154|PAX8|7849|paired box 8##AK225538|PAX8|7849|paired box 8##NM_003466|PAX8|7849|paired box 8##NM_013952|PAX8|7849|paired box 8##NM_013953|PAX8|7849|paired box 8##NM_013992|PAX8|7849|paired box 8##AK290072|CBWD2|150472|COBW domain containing 2##NM_172003|CBWD2|150472|COBW domain containing 2##AK303653|CBWD2|150472|COBW domain containing 2##AY343910|CBWD2|150472|COBW domain containing 2##AY320414|CBWD1|55871|COBW domain containing 1##BC120991|CBWD2|150472|COBW domain containing 2##BC120992|CBWD2|150472|COBW domain containing 2##AK225251|CBWD2|150472|COBW domain containing 2##AF452722|CBWD2|150472|COBW domain containing 2	0.130168	
chr22	36682642	36682767	reg1010000.p1	10.581	+	BC011915 TSC_hg19_v1_chr22_-_36681760	-941	-	TSC_hg19_v1_chr22_+_36649178 AF305224 AK303919 AK313752 AK298053 BC113867 BC114475 BC127186 BC143038 BC143039 BC017331 AK296099	-33515	+	NM_001136540 NM_001136541 NM_003661 NM_145343 TSC_hg19_v1_chr22_+_36649135 AF019225 AF323540 AK309143 AF305428 AK300454 BC112943 BC141823 BC142720	-33565	+	D11393 TSC_hg19_v1_chr22_-_36697021	14310	-	TSC_hg19_v1_chr22_-_36783906 AB290175 CR456526	101182	-	TSC_hg19_v1_chr22_-_36783943 M81105	101248	-	BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle##AF305224|APOL1|8542|apolipoprotein L, 1##AK303919|APOL1|8542|apolipoprotein L, 1##AK313752|APOL1|8542|apolipoprotein L, 1##AK298053|APOL1|8542|apolipoprotein L, 1##BC113867|APOL1|8542|apolipoprotein L, 1##BC114475|APOL1|8542|apolipoprotein L, 1##BC127186|APOL1|8542|apolipoprotein L, 1##BC143038|APOL1|8542|apolipoprotein L, 1##BC143039|APOL1|8542|apolipoprotein L, 1##BC017331|APOL1|8542|apolipoprotein L, 1##AK296099|APOL1|8542|apolipoprotein L, 1##NM_001136540|APOL1|8542|apolipoprotein L, 1##NM_001136541|APOL1|8542|apolipoprotein L, 1##NM_003661|APOL1|8542|apolipoprotein L, 1##NM_145343|APOL1|8542|apolipoprotein L, 1##AF019225|APOL1|8542|apolipoprotein L, 1##AF323540|APOL1|8542|apolipoprotein L, 1##AK309143|APOL1|8542|apolipoprotein L, 1##AF305428|APOL1|8542|apolipoprotein L, 1##AK300454|APOL1|8542|apolipoprotein L, 1##BC112943|APOL1|8542|apolipoprotein L, 1##BC141823|APOL1|8542|apolipoprotein L, 1##BC142720|APOL1|8542|apolipoprotein L, 1##D11393|MYH9|4627|myosin, heavy chain 9, non-muscle##AB290175|MYH9|4627|myosin, heavy chain 9, non-muscle##CR456526|MYH9|4627|myosin, heavy chain 9, non-muscle##M81105|MYH9|4627|myosin, heavy chain 9, non-muscle	0.999807	CTCF.p2:11:1.000
chr22	38019725	38019822	reg1009451.p1	10.581	+	TSC_hg19_v1_chr22_+_38005047 AK092417 AK122898 AX747533 NM_001172688	-14736	+	TSC_hg19_v1_chr22_+_38004869 AB463055 CU013090 CU013378 CU692224	-14890	+	TSC_hg19_v1_chr22_+_38004843 CR456493 BC010917 AK290548 BC029388 AK225157 BC044629 AF190862 AF233521 AF218584	-15003	+	TSC_hg19_v1_chr22_+_38035475 AK126873	15719	+	NM_018957 TSC_hg19_v1_chr22_+_38035684	15911	+	TSC_hg19_v1_chr22_+_38035696 AK301163	15931	+	AK092417|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK122898|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001172688|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CU013090|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CU013378|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CR456493|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC010917|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK290548|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC029388|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK225157|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC044629|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF190862|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF233521|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF218584|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_018957|SH3BP1|23616|SH3-domain binding protein 1##AK301163|SH3BP1|23616|SH3-domain binding protein 1	0.911423	CTCF.p2:-23:0.911
chr4	77352100	77352196	reg1005346.p1	10.581	+	BC035224 NM_001042784	-23691	-	TSC_hg19_v1_chr4_+_77227894 DQ891974 DQ895165 CU692542	-124247	+	TSC_hg19_v1_chr4_+_77227851 AF062534 AK074635 BC022301	-124318	+	AB055660 NM_020859	4104	+	AK027744 TSC_hg19_v1_chr4_+_77610613	258463	+	TSC_hg19_v1_chr4_+_77610738 AK304103	258603	+	BC035224|CCDC158|339965|coiled-coil domain containing 158##NM_001042784|CCDC158|339965|coiled-coil domain containing 158##DQ891974|STBD1|8987|starch binding domain 1##DQ895165|STBD1|8987|starch binding domain 1##AF062534|STBD1|8987|starch binding domain 1##AK074635|STBD1|8987|starch binding domain 1##BC022301|STBD1|8987|starch binding domain 1##AB055660|SHROOM3|57619|shroom family member 3##NM_020859|SHROOM3|57619|shroom family member 3##AK027744|SHROOM3|57619|shroom family member 3##AK304103|SHROOM3|57619|shroom family member 3	0.952059	CTCF.p2:-27:0.952
chr1	24098764	24098875	reg1010280.p1	10.580	+	L47345 TSC_hg19_v1_chr1_+_24069969 BC002883 AK313079 AB527691 DQ893026 DQ896270 AF116729	-28836	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	-28915	+	TSC_hg19_v1_chr1_+_24018295 BC018970	-80520	+	TSC_hg19_v1_chr1_-_24104774 AK055276 AL049675	5950	-	TSC_hg19_v1_chr1_+_24104875 NM_020362 AF221595 AF271784 AF218024	6054	+	AK296662 TSC_hg19_v1_chr1_+_24104906	6087	+	L47345|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##BC002883|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK313079|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##DQ893026|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##DQ896270|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AF116729|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##BC018970|RPL11|6135|ribosomal protein L11##AL049675|LOC100506963|100506963|uncharacterized LOC100506963##NM_020362|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AF221595|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AF271784|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AF218024|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AK296662|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1	0.145227	
chr4	39697439	39697554	reg1009184.p1	10.580	+	TSC_hg19_v1_chr4_-_39640486 AK023351 BC008502 NM_174921 AK307146	-56940	-	TSC_hg19_v1_chr4_+_39529635 AK056558	-167870	+	TSC_hg19_v1_chr4_-_39529187 NM_001184700 NM_001184701 NM_003359	-168321	-	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	2308	+	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	281842	-	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	282097	-	AK023351|C4orf34|201895|chromosome 4 open reading frame 34##BC008502|C4orf34|201895|chromosome 4 open reading frame 34##NM_174921|C4orf34|201895|chromosome 4 open reading frame 34##AK307146|C4orf34|201895|chromosome 4 open reading frame 34##NM_001184700|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001184701|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_003359|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	0.946819	CTCF.p2:-1:0.947
chr1	14140232	14140370	reg1009356.p2	10.579	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-64360	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-64378	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-64416	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	784893	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	1110418	+	AY505121 NM_001018001	1115994	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.996224	CTCF.p2:2:0.996
chr12	96017482	96017626	reg1012352.p1	10.579	+	AL136825 NM_032147	-72310	-	AK027434 TSC_hg19_v1_chr12_-_95942575 BC030704 NM_001042403	-74940	-	NM_006838 AK300836 TSC_hg19_v1_chr12_+_95867927 AK315559 U13261 AK055692 U29607 BC013782 AK091730 AX747149 AB463882 DQ891013 DQ894193	-149657	+	TSC_hg19_v1_chr12_-_96184346 AF297711 AK226070 AK315796	166815	-	BC136798 BC136799 AF278532 NM_021229 AF119916 TSC_hg19_v1_chr12_-_96184542	166972	-	TSC_hg19_v1_chr12_+_96252729 NM_003095 BC002505 X85372 AK311752 BC063397	235179	+	AL136825|USP44|84101|ubiquitin specific peptidase 44##NM_032147|USP44|84101|ubiquitin specific peptidase 44##AK027434|USP44|84101|ubiquitin specific peptidase 44##BC030704|USP44|84101|ubiquitin specific peptidase 44##NM_001042403|USP44|84101|ubiquitin specific peptidase 44##NM_006838|METAP2|10988|methionyl aminopeptidase 2##AK300836|METAP2|10988|methionyl aminopeptidase 2##AK315559|METAP2|10988|methionyl aminopeptidase 2##U13261|METAP2|10988|methionyl aminopeptidase 2##AK055692|METAP2|10988|methionyl aminopeptidase 2##BC013782|METAP2|10988|methionyl aminopeptidase 2##AK091730|METAP2|10988|methionyl aminopeptidase 2##DQ891013|METAP2|10988|methionyl aminopeptidase 2##DQ894193|METAP2|10988|methionyl aminopeptidase 2##AF297711|NTN4|59277|netrin 4##AK226070|NTN4|59277|netrin 4##AK315796|NTN4|59277|netrin 4##BC136798|NTN4|59277|netrin 4##BC136799|NTN4|59277|netrin 4##AF278532|NTN4|59277|netrin 4##NM_021229|NTN4|59277|netrin 4##AF119916|NTN4|59277|netrin 4##NM_003095|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC002505|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##X85372|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##AK311752|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC063397|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F	0.973843	CTCF.p2:-6:0.957
chr9	110103573	110103709	reg1009650.p2	10.578	+	NM_001244713 AK297986 AK316189	-56550	+	AY313777 NM_001244724 TSC_hg19_v1_chr9_+_110046392	-57275	+	TSC_hg19_v1_chr9_+_110045874 DQ890563 DQ893726 AB527553 CU676798	-57732	+	TSC_hg19_v1_chr9_-_110250732 AK095134	147079	-	HM026463 CU688792 CU689020 DQ891793 DQ894975 AB385001 TSC_hg19_v1_chr9_-_110251402 BC030811 BC029923 AK313489	147807	-	AF105036 AF022184 TSC_hg19_v1_chr9_-_110251847 U70663	148199	-	NM_001244713|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK297986|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK316189|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AY313777|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##NM_001244724|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##DQ890563|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##DQ893726|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK095134|KLF4|9314|Kruppel-like factor 4 (gut)##HM026463|KLF4|9314|Kruppel-like factor 4 (gut)##DQ891793|KLF4|9314|Kruppel-like factor 4 (gut)##DQ894975|KLF4|9314|Kruppel-like factor 4 (gut)##BC030811|KLF4|9314|Kruppel-like factor 4 (gut)##BC029923|KLF4|9314|Kruppel-like factor 4 (gut)##AK313489|KLF4|9314|Kruppel-like factor 4 (gut)##AF105036|KLF4|9314|Kruppel-like factor 4 (gut)##AF022184|KLF4|9314|Kruppel-like factor 4 (gut)##U70663|KLF4|9314|Kruppel-like factor 4 (gut)	0.788473	CTCF.p2:0:0.788
chr9	33738227	33738367	reg1012440.p1	10.578	+	TSC_hg19_v1_chr9_+_33624216 M62898	-114079	+	NM_001244752	-213887	+	TSC_hg19_v1_chr9_-_33473921 NM_022917 NM_139235	-264367	-	AB298285 NM_001197097 NM_007343 AB528734 X71345 X72781 TSC_hg19_v1_chr9_+_33750676 BC030238 AY052783 AB298286 NM_001197098	12343	+	BC069476 BC069494 NM_002771 X15505 D45417	57267	+	TSC_hg19_v1_chr9_+_33817170 NM_017811	78887	+	M62898|ANXA2P2|304|annexin A2 pseudogene 2##NM_001244752|ANKRD18B|441459|ankyrin repeat domain 18B##NM_022917|NOL6|65083|nucleolar protein family 6 (RNA-associated)##NM_139235|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AB298285|PRSS3|5646|protease, serine, 3##NM_001197097|PRSS3|5646|protease, serine, 3##NM_007343|PRSS3|5646|protease, serine, 3##X71345|PRSS3|5646|protease, serine, 3##X72781|PRSS3|5646|protease, serine, 3##BC030238|PRSS3|5646|protease, serine, 3##AY052783|PRSS3|5646|protease, serine, 3##AB298286|PRSS3|5646|protease, serine, 3##NM_001197098|PRSS3|5646|protease, serine, 3##BC069476|PRSS3|5646|protease, serine, 3##BC069494|PRSS3|5646|protease, serine, 3##NM_002771|PRSS3|5646|protease, serine, 3##X15505|PRSS3|5646|protease, serine, 3##D45417|PRSS3|5646|protease, serine, 3##NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2	0.489092	CTCF.p2:4:0.489
chr14	74684450	74684592	reg1009910.p1	10.576	+	NM_001024674 AK307062 TSC_hg19_v1_chr14_+_74551662 AK055422 AK023979 BC009539	-132853	+	TSC_hg19_v1_chr14_-_74551167 BC032371 NM_005589	-133332	-	AF038011 TSC_hg19_v1_chr14_-_74551122 AF159889 CU678802 DQ892921 DQ893680 EU176729 AK223244 AJ249994 BC004909 AK222687 AF148505 AK312389 AK294243 AK311478	-133406	-	AY336059 NM_182894 BC128153	21675	+	BT007412 CR457104 DQ892847 DQ896094 BC012815 TSC_hg19_v1_chr14_-_74769638 AK291332 AK308382 AF009746 AK297934 BX247984 BX248053 NM_005050	85169	-	NM_018228 TSC_hg19_v1_chr14_+_74815173	130648	+	NM_001024674|LIN52|91750|lin-52 homolog (C. elegans)##AK307062|LIN52|91750|lin-52 homolog (C. elegans)##AK055422|LIN52|91750|lin-52 homolog (C. elegans)##AK023979|LIN52|91750|lin-52 homolog (C. elegans)##BC009539|LIN52|91750|lin-52 homolog (C. elegans)##BC032371|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##NM_005589|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AF038011|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AF159889|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##DQ892921|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##DQ893680|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##EU176729|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK223244|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AJ249994|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##BC004909|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK222687|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AF148505|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK312389|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK294243|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK311478|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AY336059|VSX2|338917|visual system homeobox 2##NM_182894|VSX2|338917|visual system homeobox 2##BC128153|VSX2|338917|visual system homeobox 2##BT007412|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##CR457104|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ892847|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ896094|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BC012815|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK291332|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK308382|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AF009746|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK297934|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX247984|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX248053|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_005050|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_018228|VRTN|55237|vertebrae development homolog (pig)	0.779504	CTCF.p2:9:0.780
chr6	135857201	135857344	reg1011725.p1	10.576	+	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	-38308	+	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	-38387	-	AY133243 TSC_hg19_v1_chr6_-_135818858 DQ090887	-38447	-	AK290582 AB038040 NM_018945 TSC_hg19_v1_chr6_+_136172838 AJ251860 BC070267	315579	+	TSC_hg19_v1_chr6_-_136571414 AK292303 BC063688 AK125758 NM_001099286 NM_138419	714157	-	BC078160 BC063846 TSC_hg19_v1_chr6_-_136610926 BX649160 BC016682	753638	-	BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##AY133243|AHI1|54806|Abelson helper integration site 1##DQ090887|AHI1|54806|Abelson helper integration site 1##AK290582|PDE7B|27115|phosphodiesterase 7B##AB038040|PDE7B|27115|phosphodiesterase 7B##NM_018945|PDE7B|27115|phosphodiesterase 7B##AJ251860|PDE7B|27115|phosphodiesterase 7B##BC070267|PDE7B|27115|phosphodiesterase 7B##AK292303|FAM54A|113115|family with sequence similarity 54, member A##BC063688|FAM54A|113115|family with sequence similarity 54, member A##AK125758|FAM54A|113115|family with sequence similarity 54, member A##NM_001099286|FAM54A|113115|family with sequence similarity 54, member A##NM_138419|FAM54A|113115|family with sequence similarity 54, member A##BC078160|BCLAF1|9774|BCL2-associated transcription factor 1##BC063846|BCLAF1|9774|BCL2-associated transcription factor 1##BX649160|BCLAF1|9774|BCL2-associated transcription factor 1##BC016682|BCLAF1|9774|BCL2-associated transcription factor 1	0.653099	CTCF.p2:-24:0.653
chr6	56716677	56716825	reg1011282.p1	10.576	+	AK299898 TSC_hg19_v1_chr6_-_56716715	-37	-	AK294830 TSC_hg19_v1_chr6_-_56716493	-299	-	TSC_hg19_v1_chr6_-_56708446 U31850	-8279	-	TSC_hg19_v1_chr6_+_56819725 NM_152731	102988	+	BC036119 TSC_hg19_v1_chr6_+_56819931 AK054724	103255	+	TSC_hg19_v1_chr6_+_56911328 BC041125 NM_020931	194595	+	AK299898|DST|667|dystonin##AK294830|DST|667|dystonin##U31850|DST|667|dystonin##NM_152731|BEND6|221336|BEN domain containing 6##BC036119|BEND6|221336|BEN domain containing 6##AK054724|BEND6|221336|BEN domain containing 6##BC041125|KIAA1586|57691|KIAA1586##NM_020931|KIAA1586|57691|KIAA1586	0.016251	
chr7	80328485	80328625	reg1012500.p1	10.576	+	HM217020 HM217021 HM217022 HM217023 HM217024 HM217025 HM217026 AB590184 CU678951 DQ893062 DQ896314 TSC_hg19_v1_chr7_+_80276126	-52508	+	L06850 NM_001127443 NM_001127444	-52858	+	TSC_hg19_v1_chr7_+_80267983 M98398 M98399 M24795	-60552	+	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	219879	-	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	220119	-	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	1070819	-	HM217020|CD36|948|CD36 molecule (thrombospondin receptor)##HM217021|CD36|948|CD36 molecule (thrombospondin receptor)##HM217022|CD36|948|CD36 molecule (thrombospondin receptor)##HM217023|CD36|948|CD36 molecule (thrombospondin receptor)##HM217024|CD36|948|CD36 molecule (thrombospondin receptor)##HM217025|CD36|948|CD36 molecule (thrombospondin receptor)##HM217026|CD36|948|CD36 molecule (thrombospondin receptor)##DQ893062|CD36|948|CD36 molecule (thrombospondin receptor)##DQ896314|CD36|948|CD36 molecule (thrombospondin receptor)##L06850|CD36|948|CD36 molecule (thrombospondin receptor)##NM_001127443|CD36|948|CD36 molecule (thrombospondin receptor)##NM_001127444|CD36|948|CD36 molecule (thrombospondin receptor)##M98398|CD36|948|CD36 molecule (thrombospondin receptor)##M98399|CD36|948|CD36 molecule (thrombospondin receptor)##M24795|CD36|948|CD36 molecule (thrombospondin receptor)##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)	0.807656	CTCF.p2:-11:0.808
chrX	18904646	18904805	reg1009139.p1	10.575	+	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	-195681	+	AB464151 AF014459 DQ426892 NM_000330	-214521	-	BC036091 NM_001037343	-444382	+	TSC_hg19_v1_chrX_-_19002476 NM_000292	97737	-	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	235942	-	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	457357	+	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1##BC036091|CDKL5|6792|cyclin-dependent kinase-like 5##NM_001037343|CDKL5|6792|cyclin-dependent kinase-like 5##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1	0.322787	CTCF.p2:18:0.323
chr6	31334778	31334909	reg1010860.p1	10.574	+	TSC_hg19_v1_chr6_-_31324990 AK124160 NM_005514 L42024	-9845	-	AK129796 AK130137 AK130166 AK130169 AK290570 AK292226 AK300685 AK301008 AK303541 AK309345 AK310586 AK313911 TSC_hg19_v1_chr6_-_31324957 BX647315	-9886	-	D14343 M28204 AF436095 AF436096 L20086 L20088 L20089 M86403 DQ336696 AF436090 AF436091 AF436092 AF436093 D87665 M12678 M15470 M28203 TSC_hg19_v1_chr6_-_31324946 BC007243 DQ336697 AF006634 AF022783 AF026218 AF170577 AF189017 AF418978 AF436098 AJ634528 AM711637 D25275 D31816 D49824 D50290 D50292 D50294 D50295 D50299 D50300 D83043 D85761 D85762 FM205711 L04695 L04696 L07743 L09736 L11603 L11604 L11666 L15005 L17005 L19923 L19937 L22027 L22028 L24373 L33922 L36318 L36591 L37880 L37881 L38504 L41214 L41925 L42345 M24033 M28205 M32317 M32319 M32320 M77774 M77775 M77776 M77777 M77778 M81798 M84380 M84381 M84382 M84383 M84384 M84385 M84694 U01848 U03027 U03698 U03859 U04243 U04244 U04245 U04787 U09864 U09912 U11262 U11264 U11265 U11266 U11268 U11269 U14943 U17107 U17572 U21052 U21053 U27608 U29057 U29083 U29480 U30904 U30936 U31971 U35431 U35734 U36492 U38800 U40498 U63653 U70528 U80945 U88407 X61706 X61708 X64454 X73578 X77658 X81363 X84725 X90390 X90391 X91749 Y08995 Y09058 Y09118 Y13029 Y13567 Z15143 Z22651 Z33453 AF389378 AF428252 AJ535113 BC091497 AY007140 BC013187 M16102 AK026595 AK130155 AK130654	-9919	-	TSC_hg19_v1_chr6_+_31368497 AK310028	33634	+	BC016929 AK225393 L14848 NM_000247 NM_001177519 AK299135 AB590509 CU677769 AB506764 AY204547 AY750850	36539	+	TSC_hg19_v1_chr6_+_31430961 BX640979 AK093953 AK290875 L06175 AJ437509 BC106759 BC113853 BC114462	96139	+	AK124160|HLA-B|3106|major histocompatibility complex, class I, B##NM_005514|HLA-B|3106|major histocompatibility complex, class I, B##AK292226|HLA-B|3106|major histocompatibility complex, class I, B##AK300685|HLA-B|3106|major histocompatibility complex, class I, B##AK310586|HLA-B|3106|major histocompatibility complex, class I, B##AK313911|HLA-B|3106|major histocompatibility complex, class I, B##BX647315|HLA-B|3106|major histocompatibility complex, class I, B##M28204|HLA-B|3106|major histocompatibility complex, class I, B##AF436095|HLA-B|3106|major histocompatibility complex, class I, B##AF436096|HLA-B|3106|major histocompatibility complex, class I, B##DQ336696|HLA-B|3106|major histocompatibility complex, class I, B##AF436090|HLA-B|3106|major histocompatibility complex, class I, B##AF436091|HLA-B|3106|major histocompatibility complex, class I, B##AF436092|HLA-B|3106|major histocompatibility complex, class I, B##AF436093|HLA-B|3106|major histocompatibility complex, class I, B##D87665|HLA-B|3106|major histocompatibility complex, class I, B##M12678|HLA-B|3106|major histocompatibility complex, class I, B##M15470|HLA-B|3106|major histocompatibility complex, class I, B##M28203|HLA-B|3106|major histocompatibility complex, class I, B##BC007243|HLA-B|3106|major histocompatibility complex, class I, B##DQ336697|HLA-B|3106|major histocompatibility complex, class I, B##AF022783|HLA-B|3106|major histocompatibility complex, class I, B##AF026218|HLA-B|3106|major histocompatibility complex, class I, B##AF170577|HLA-B|3106|major histocompatibility complex, class I, B##AF189017|HLA-B|3106|major histocompatibility complex, class I, B##AF436098|HLA-B|3106|major histocompatibility complex, class I, B##AJ634528|HLA-B|3106|major histocompatibility complex, class I, B##D25275|HLA-B|3106|major histocompatibility complex, class I, B##D31816|HLA-B|3106|major histocompatibility complex, class I, B##D50290|HLA-B|3106|major histocompatibility complex, class I, B##D50292|HLA-B|3106|major histocompatibility complex, class I, B##D50294|HLA-B|3106|major histocompatibility complex, class I, B##D50295|HLA-B|3106|major histocompatibility complex, class I, B##D50300|HLA-B|3106|major histocompatibility complex, class I, B##D83043|HLA-B|3106|major histocompatibility complex, class I, B##L07743|HLA-B|3106|major histocompatibility complex, class I, B##L09736|HLA-B|3106|major histocompatibility complex, class I, B##L11603|HLA-B|3106|major histocompatibility complex, class I, B##L11604|HLA-B|3106|major histocompatibility complex, class I, B##L11666|HLA-B|3106|major histocompatibility complex, class I, B##L15005|HLA-B|3106|major histocompatibility complex, class I, B##L17005|HLA-B|3106|major histocompatibility complex, class I, B##L19937|HLA-B|3106|major histocompatibility complex, class I, B##L22027|HLA-B|3106|major histocompatibility complex, class I, B##L24373|HLA-B|3106|major histocompatibility complex, class I, B##L33922|HLA-B|3106|major histocompatibility complex, class I, B##L36591|HLA-B|3106|major histocompatibility complex, class I, B##L37880|HLA-B|3106|major histocompatibility complex, class I, B##L37881|HLA-B|3106|major histocompatibility complex, class I, B##L41925|HLA-B|3106|major histocompatibility complex, class I, B##L42345|HLA-B|3106|major histocompatibility complex, class I, B##M24033|HLA-B|3106|major histocompatibility complex, class I, B##M28205|HLA-B|3106|major histocompatibility complex, class I, B##M32317|HLA-B|3106|major histocompatibility complex, class I, B##M32319|HLA-B|3106|major histocompatibility complex, class I, B##M32320|HLA-B|3106|major histocompatibility complex, class I, B##M77774|HLA-B|3106|major histocompatibility complex, class I, B##M77776|HLA-B|3106|major histocompatibility complex, class I, B##M77778|HLA-B|3106|major histocompatibility complex, class I, B##M84380|HLA-B|3106|major histocompatibility complex, class I, B##M84382|HLA-B|3106|major histocompatibility complex, class I, B##U01848|HLA-B|3106|major histocompatibility complex, class I, B##U03027|HLA-B|3106|major histocompatibility complex, class I, B##U03859|HLA-B|3106|major histocompatibility complex, class I, B##U04244|HLA-B|3106|major histocompatibility complex, class I, B##U04245|HLA-B|3106|major histocompatibility complex, class I, B##U04787|HLA-B|3106|major histocompatibility complex, class I, B##U09864|HLA-B|3106|major histocompatibility complex, class I, B##U09912|HLA-B|3106|major histocompatibility complex, class I, B##U11262|HLA-B|3106|major histocompatibility complex, class I, B##U11264|HLA-B|3106|major histocompatibility complex, class I, B##U11265|HLA-B|3106|major histocompatibility complex, class I, B##U11266|HLA-B|3106|major histocompatibility complex, class I, B##U11268|HLA-B|3106|major histocompatibility complex, class I, B##U11269|HLA-B|3106|major histocompatibility complex, class I, B##U17107|HLA-B|3106|major histocompatibility complex, class I, B##U17572|HLA-B|3106|major histocompatibility complex, class I, B##U21052|HLA-B|3106|major histocompatibility complex, class I, B##U21053|HLA-B|3106|major histocompatibility complex, class I, B##U29057|HLA-B|3106|major histocompatibility complex, class I, B##U30904|HLA-B|3106|major histocompatibility complex, class I, B##U30936|HLA-B|3106|major histocompatibility complex, class I, B##U31971|HLA-B|3106|major histocompatibility complex, class I, B##U35431|HLA-B|3106|major histocompatibility complex, class I, B##U40498|HLA-B|3106|major histocompatibility complex, class I, B##U70528|HLA-B|3106|major histocompatibility complex, class I, B##U80945|HLA-B|3106|major histocompatibility complex, class I, B##U88407|HLA-B|3106|major histocompatibility complex, class I, B##X61708|HLA-B|3106|major histocompatibility complex, class I, B##X64454|HLA-B|3106|major histocompatibility complex, class I, B##X77658|HLA-B|3106|major histocompatibility complex, class I, B##X90390|HLA-B|3106|major histocompatibility complex, class I, B##X90391|HLA-B|3106|major histocompatibility complex, class I, B##X91749|HLA-B|3106|major histocompatibility complex, class I, B##Y13029|HLA-B|3106|major histocompatibility complex, class I, B##Y13567|HLA-B|3106|major histocompatibility complex, class I, B##Z15143|HLA-B|3106|major histocompatibility complex, class I, B##AF389378|HLA-B|3106|major histocompatibility complex, class I, B##BC091497|HLA-B|3106|major histocompatibility complex, class I, B##AY007140|HLA-B|3106|major histocompatibility complex, class I, B##BC013187|HLA-B|3106|major histocompatibility complex, class I, B##M16102|HLA-B|3106|major histocompatibility complex, class I, B##BC016929|MICA|100507436|MHC class I polypeptide-related sequence A##AK225393|MICA|100507436|MHC class I polypeptide-related sequence A##L14848|MICA|100507436|MHC class I polypeptide-related sequence A##NM_000247|MICA|100507436|MHC class I polypeptide-related sequence A##NM_001177519|MICA|100507436|MHC class I polypeptide-related sequence A##AK299135|MICA|100507436|MHC class I polypeptide-related sequence A##AB506764|MICA|100507436|MHC class I polypeptide-related sequence A##AY204547|MICA|100507436|MHC class I polypeptide-related sequence A##AY750850|MICA|100507436|MHC class I polypeptide-related sequence A##BX640979|HCP5|10866|HLA complex P5 (non-protein coding)##AK093953|HCP5|10866|HLA complex P5 (non-protein coding)##AK290875|HCP5|10866|HLA complex P5 (non-protein coding)##L06175|HCP5|10866|HLA complex P5 (non-protein coding)##BC106759|HCP5|10866|HLA complex P5 (non-protein coding)##BC113853|HCP5|10866|HLA complex P5 (non-protein coding)##BC114462|HCP5|10866|HLA complex P5 (non-protein coding)	1.147294	CTCF.p2:7:1.000
chr5	36739879	36739993	reg1010356.p1	10.573	+	NM_001166695 U03504 AB529121 AY954110 TSC_hg19_v1_chr5_+_36608562	-131440	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	-133208	+	NM_001166696 NM_004172	-133480	+	TSC_hg19_v1_chr5_-_36876762 AK000901	136827	-	TSC_hg19_v1_chr5_+_36876875 NM_015384 NM_133433 AJ627032 AJ640137	136928	+	TSC_hg19_v1_chr5_+_36876945 BC146821 BX640644 BC131490 AK290347 BX538178 BX538177	137134	+	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK000901|LOC646719|646719|uncharacterized LOC646719##NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)##NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)##BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)##BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)##BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)##AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)	0.17684	
chr4	81911224	81911338	reg1009541.p2	10.572	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-654384	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	-723422	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	-792627	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	40861	+	AB528214 D70899 NM_006259 X94612	214926	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	481702	-	BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B	0.992917	CTCF.p2:1:0.993
chr9	97443859	97443963	reg1009821.p1	10.572	+	TSC_hg19_v1_chr9_-_97402561 AK292199	-41349	-	NM_001127628 TSC_hg19_v1_chr9_-_97402546	-41373	-	TSC_hg19_v1_chr9_-_97401835 AK223395 AK316583 NM_000507	-42023	-	TSC_hg19_v1_chr9_+_97488980 NM_001193331 NM_032823 AK296782 AK057450	45051	+	BC029616 TSC_hg19_v1_chr9_+_97488999	45092	+	NM_001193329 AJ560639	78086	+	AK292199|FBP1|2203|fructose-1,6-bisphosphatase 1##NM_001127628|FBP1|2203|fructose-1,6-bisphosphatase 1##AK223395|FBP1|2203|fructose-1,6-bisphosphatase 1##AK316583|FBP1|2203|fructose-1,6-bisphosphatase 1##NM_000507|FBP1|2203|fructose-1,6-bisphosphatase 1##NM_001193331|C9orf3|84909|chromosome 9 open reading frame 3##NM_032823|C9orf3|84909|chromosome 9 open reading frame 3##AK296782|C9orf3|84909|chromosome 9 open reading frame 3##AK057450|C9orf3|84909|chromosome 9 open reading frame 3##BC029616|C9orf3|84909|chromosome 9 open reading frame 3##NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3##AJ560639|C9orf3|84909|chromosome 9 open reading frame 3	0.988112	CTCF.p2:-14:0.988
chr10	114074740	114074861	reg1010123.p2	10.571	+	BC113497 BC113499 AF312827 HQ258194 NM_058222	-31348	+	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	-131295	-	AB046780 TSC_hg19_v1_chr10_-_113933602	-141239	-	AK000339 TSC_hg19_v1_chr10_+_114133781	58978	+	TSC_hg19_v1_chr10_+_114133873 NM_203379	59103	+	TSC_hg19_v1_chr10_+_114135025 NM_203380	60222	+	BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AK000339|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##NM_203379|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##NM_203380|ACSL5|51703|acyl-CoA synthetase long-chain family member 5	0.999333	CTCF.p2:3:0.999
chr1	182054153	182054300	reg1010371.p2	10.571	+	BC137223 BC137224 AK128654 NM_001009992	-23429	-	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-601526	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-996361	+	TSC_hg19_v1_chr1_-_182354649 AK301600	300456	-	TSC_hg19_v1_chr1_-_182357758 BC127883	303537	-	AY486122 S70290 AB528372 DQ893278 DQ896609 EU832658 EU832735 TSC_hg19_v1_chr1_-_182357935	303677	-	BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase##AY486122|GLUL|2752|glutamate-ammonia ligase##S70290|GLUL|2752|glutamate-ammonia ligase##DQ893278|GLUL|2752|glutamate-ammonia ligase##DQ896609|GLUL|2752|glutamate-ammonia ligase##EU832658|GLUL|2752|glutamate-ammonia ligase##EU832735|GLUL|2752|glutamate-ammonia ligase	0.99322	CTCF.p2:1:0.993
chr1	76619928	76620063	reg1009127.p1	10.570	+	TSC_hg19_v1_chr1_+_76540430 NM_001160011 NM_152996 AK091215 AX746855 BC059363 AK297363 AY358540 AJ507291 CU691350	-79533	+	AF403035 CU691378 BC022517 AF429968 BC036573 AK098606 NM_080868	-221950	-	NM_002440 BC033030 U89293 AF104243 AB528458 CU689598 DQ891259 DQ894445	-357383	+	TSC_hg19_v1_chr1_+_77165439 D28460	545445	+	TSC_hg19_v1_chr1_+_77333125 AK056241	713132	+	TSC_hg19_v1_chr1_+_77333164 AK095758 AK300902 AK295019 BC001201 NM_030965	713176	+	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17##AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17##AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_002440|MSH4|4438|mutS homolog 4 (E. coli)##BC033030|MSH4|4438|mutS homolog 4 (E. coli)##U89293|MSH4|4438|mutS homolog 4 (E. coli)##AF104243|MSH4|4438|mutS homolog 4 (E. coli)##DQ891259|MSH4|4438|mutS homolog 4 (E. coli)##DQ894445|MSH4|4438|mutS homolog 4 (E. coli)##D28460|TPI1|7167|triosephosphate isomerase 1##AK056241|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK095758|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK300902|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK295019|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##BC001201|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##NM_030965|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	0.947547	CTCF.p2:-5:0.948
chr17	72206662	72206799	reg1012522.p1	10.570	+	TSC_hg19_v1_chr17_+_72199849 BC000603	-6877	+	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	-6915	+	NM_001144952	-566504	-	TSC_hg19_v1_chr17_+_72209709 NM_032646 BC107492 BC107602 AK315163 AF319952 BC005168	2939	+	BX647912 NM_052869	37774	+	BC039582 NM_001172810 NM_023036 BC033013 AF250288	63676	+	BC000603|RPL38|6169|ribosomal protein L38##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##NM_032646|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107492|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107602|TTYH2|94015|tweety homolog 2 (Drosophila)##AK315163|TTYH2|94015|tweety homolog 2 (Drosophila)##AF319952|TTYH2|94015|tweety homolog 2 (Drosophila)##BC005168|TTYH2|94015|tweety homolog 2 (Drosophila)##BX647912|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_052869|TTYH2|94015|tweety homolog 2 (Drosophila)##BC039582|DNAI2|64446|dynein, axonemal, intermediate chain 2##NM_001172810|DNAI2|64446|dynein, axonemal, intermediate chain 2##NM_023036|DNAI2|64446|dynein, axonemal, intermediate chain 2##BC033013|DNAI2|64446|dynein, axonemal, intermediate chain 2##AF250288|DNAI2|64446|dynein, axonemal, intermediate chain 2	0.998981	CTCF.p2:-6:0.999
chr8	52576209	52576353	reg1012503.p1	10.570	+	AJ003030 NM_018967	-1751685	+	NM_001007176 BC017981 AJ276240	-2591372	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-2742371	-	EU170240 AY877349 NM_144651	145672	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	235321	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	235446	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.987534	CTCF.p2:-4:0.988
chr11	5025790	5025922	reg1012735.p1	10.569	+	AB463974 NM_001004755	-5644	+	BC101541 BC101543 AF291664 NM_021801 AJ251531 AF230354 AF248646	-16427	+	NM_001004748 AB528769	-48914	-	NM_001001916	41899	+	NM_001005164	55000	-	AY726590 NM_001005160 AB463976	127983	-	NM_001004755|OR51L1|119682|olfactory receptor, family 51, subfamily L, member 1##BC101541|MMP26|56547|matrix metallopeptidase 26##BC101543|MMP26|56547|matrix metallopeptidase 26##AF291664|MMP26|56547|matrix metallopeptidase 26##NM_021801|MMP26|56547|matrix metallopeptidase 26##AJ251531|MMP26|56547|matrix metallopeptidase 26##AF230354|MMP26|56547|matrix metallopeptidase 26##AF248646|MMP26|56547|matrix metallopeptidase 26##NM_001004748|OR51A2|401667|olfactory receptor, family 51, subfamily A, member 2##NM_001001916|OR52J3|119679|olfactory receptor, family 52, subfamily J, member 3##NM_001005164|OR52E2|119678|olfactory receptor, family 52, subfamily E, member 2##AY726590|OR52A5|390054|olfactory receptor, family 52, subfamily A, member 5##NM_001005160|OR52A5|390054|olfactory receptor, family 52, subfamily A, member 5	0.998636	CTCF.p2:7:0.999
chr15	78715327	78715422	reg1008728.p1	10.569	+	TSC_hg19_v1_chr15_+_78632694 NM_004378 AB593091 BC022069 S74445 DQ896830 EU176284 CR457017 AL110113	-82671	+	TSC_hg19_v1_chr15_-_78591935 AF127799 AF100786 BC010080 AK311320 BC002565 AK024754 NM_025234 AK300838 AK304617 AK310477	-123401	-	BC031044 NM_001130183	-156834	+	TSC_hg19_v1_chr15_+_78730557 NM_004136	15147	+	TSC_hg19_v1_chr15_+_78730595 AB209403 BC017880 AK292992 BC117481 BC117483 BC143948 AB586699 HQ258663 M58511	15249	+	TSC_hg19_v1_chr15_+_78799930 NM_001013619 NM_001083612 AK126453 BC132753 BC144383	84553	+	NM_004378|CRABP1|1381|cellular retinoic acid binding protein 1##AB593091|CRABP1|1381|cellular retinoic acid binding protein 1##BC022069|CRABP1|1381|cellular retinoic acid binding protein 1##S74445|CRABP1|1381|cellular retinoic acid binding protein 1##DQ896830|CRABP1|1381|cellular retinoic acid binding protein 1##EU176284|CRABP1|1381|cellular retinoic acid binding protein 1##CR457017|CRABP1|1381|cellular retinoic acid binding protein 1##AL110113|CRABP1|1381|cellular retinoic acid binding protein 1##AF127799|WDR61|80349|WD repeat domain 61##AF100786|WDR61|80349|WD repeat domain 61##BC010080|WDR61|80349|WD repeat domain 61##AK311320|WDR61|80349|WD repeat domain 61##AK024754|WDR61|80349|WD repeat domain 61##NM_025234|WDR61|80349|WD repeat domain 61##AK300838|WDR61|80349|WD repeat domain 61##AK304617|WDR61|80349|WD repeat domain 61##BC031044|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_001130183|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_004136|IREB2|3658|iron-responsive element binding protein 2##AB209403|IREB2|3658|iron-responsive element binding protein 2##BC017880|IREB2|3658|iron-responsive element binding protein 2##AK292992|IREB2|3658|iron-responsive element binding protein 2##BC117481|IREB2|3658|iron-responsive element binding protein 2##BC117483|IREB2|3658|iron-responsive element binding protein 2##BC143948|IREB2|3658|iron-responsive element binding protein 2##HQ258663|IREB2|3658|iron-responsive element binding protein 2##M58511|IREB2|3658|iron-responsive element binding protein 2##NM_001013619|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##NM_001083612|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##AK126453|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##BC132753|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##BC144383|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1	0.999702	CTCF.p2:2:1.000
chr2	220267777	220267889	reg1009929.p1	10.569	+	TSC_hg19_v1_chr2_-_220252652 AF005050 AK001977 AK302809 AK001777 NM_012100	-15188	-	TSC_hg19_v1_chr2_-_220252614 AK023005	-15236	-	AK021871 AB463418 DQ891937 DQ895124 TSC_hg19_v1_chr2_-_220252539 BC000653	-15299	-	AK097038 BC032116 NM_001927 TSC_hg19_v1_chr2_+_220283098 AK098332 AK123787 AK300654 EF617312 U59167 BC010072 DQ892282 DQ895482 CU689276 AF055081 AF055082 AF055083 AF137053 AF167579 AF486807 AF487828 AF521879 AF527578 AY083345 AY125465 DQ104335 DQ104336 DQ104337	15308	+	NM_005876 DQ395348 TSC_hg19_v1_chr2_+_220299862	31947	+	AK289531 TSC_hg19_v1_chr2_+_220306806	38956	+	AF005050|DNPEP|23549|aspartyl aminopeptidase##AK001977|DNPEP|23549|aspartyl aminopeptidase##AK302809|DNPEP|23549|aspartyl aminopeptidase##AK001777|DNPEP|23549|aspartyl aminopeptidase##NM_012100|DNPEP|23549|aspartyl aminopeptidase##AK023005|DNPEP|23549|aspartyl aminopeptidase##AK021871|DNPEP|23549|aspartyl aminopeptidase##DQ891937|DNPEP|23549|aspartyl aminopeptidase##DQ895124|DNPEP|23549|aspartyl aminopeptidase##BC000653|DNPEP|23549|aspartyl aminopeptidase##AK097038|DES|1674|desmin##BC032116|DES|1674|desmin##NM_001927|DES|1674|desmin##AK098332|DES|1674|desmin##AK123787|DES|1674|desmin##AK300654|DES|1674|desmin##EF617312|DES|1674|desmin##U59167|DES|1674|desmin##BC010072|DES|1674|desmin##DQ892282|DES|1674|desmin##DQ895482|DES|1674|desmin##AF055081|DES|1674|desmin##AF055082|DES|1674|desmin##AF055083|DES|1674|desmin##AF137053|DES|1674|desmin##AF167579|DES|1674|desmin##AF486807|DES|1674|desmin##AF487828|DES|1674|desmin##AF521879|DES|1674|desmin##AF527578|DES|1674|desmin##AY083345|DES|1674|desmin##AY125465|DES|1674|desmin##DQ104335|DES|1674|desmin##DQ104336|DES|1674|desmin##DQ104337|DES|1674|desmin##NM_005876|SPEG|10290|SPEG complex locus##DQ395348|SPEG|10290|SPEG complex locus##AK289531|SPEG|10290|SPEG complex locus	0.940835	CTCF.p2:0:0.941
chr12	110371969	110372101	reg1011872.p1	10.568	+	AY007230 NM_032300 BC022838	-33664	+	TSC_hg19_v1_chr12_+_110338090 AK092736 AX747696 NM_001143852 BC004285 AK301262	-33933	+	AY372530 AY372531 CU679533 AK313457 AF209704 TSC_hg19_v1_chr12_-_110318304 AY372532 BC009932 NM_016433	-53757	-	AB451294 AB451428 AF124491 AK303198 BT007312 CR533568 AB385285 TSC_hg19_v1_chr12_-_110434050	62004	-	TSC_hg19_v1_chr12_-_110434107 BC001379 D63482 AK222736 AK308304	62047	-	AK304240 TSC_hg19_v1_chr12_-_110434185	62146	-	AY007230|TCHP|84260|trichoplein, keratin filament binding##NM_032300|TCHP|84260|trichoplein, keratin filament binding##BC022838|TCHP|84260|trichoplein, keratin filament binding##AK092736|TCHP|84260|trichoplein, keratin filament binding##NM_001143852|TCHP|84260|trichoplein, keratin filament binding##BC004285|TCHP|84260|trichoplein, keratin filament binding##AK301262|TCHP|84260|trichoplein, keratin filament binding##AY372530|GLTP|51228|glycolipid transfer protein##AY372531|GLTP|51228|glycolipid transfer protein##AK313457|GLTP|51228|glycolipid transfer protein##AF209704|GLTP|51228|glycolipid transfer protein##AY372532|GLTP|51228|glycolipid transfer protein##BC009932|GLTP|51228|glycolipid transfer protein##NM_016433|GLTP|51228|glycolipid transfer protein##AB451294|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AB451428|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AF124491|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AK303198|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##BT007312|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##CR533568|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##BC001379|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##D63482|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AK222736|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AK308304|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AK304240|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2	0.923933	CTCF.p2:-1:0.924
chr7	96774522	96774635	reg1010411.p1	10.567	+	TSC_hg19_v1_chr7_+_96747012 BC022858 AF201933 BC020621	-27548	+	BC028409 NM_020186	-28674	+	BC006226 TSC_hg19_v1_chr7_-_96654144 AK023493 NM_005221 AK297614	-120384	-	NM_003182 NM_013996 NM_013997 NM_013998 U37529 AK222957 BC018047 X54469	586774	+	AK302242 AK000379 NM_001178077 NM_133436	726872	-	BC008723 TSC_hg19_v1_chr7_-_97501721 BC014621	727126	-	BC022858|ACN9|57001|ACN9 homolog (S. cerevisiae)##AF201933|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC020621|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC006226|DLX5|1749|distal-less homeobox 5##AK023493|DLX5|1749|distal-less homeobox 5##NM_005221|DLX5|1749|distal-less homeobox 5##AK297614|DLX5|1749|distal-less homeobox 5##NM_003182|TAC1|6863|tachykinin, precursor 1##NM_013996|TAC1|6863|tachykinin, precursor 1##NM_013997|TAC1|6863|tachykinin, precursor 1##NM_013998|TAC1|6863|tachykinin, precursor 1##U37529|TAC1|6863|tachykinin, precursor 1##AK222957|TAC1|6863|tachykinin, precursor 1##BC018047|TAC1|6863|tachykinin, precursor 1##X54469|TAC1|6863|tachykinin, precursor 1##AK302242|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK000379|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178077|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_133436|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC008723|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC014621|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)	0.810453	CTCF.p2:-15:0.810
chr12	114946463	114946577	reg1010386.p2	10.566	+	AB051068 AF221714 NM_000192 NM_080717 Y09445	-100302	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-102596	-	NM_080718 U80987 U89353 AB527531 EU446658	-104816	-	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	175620	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	1768430	-	TSC_hg19_v1_chr12_-_116715263 AY338463	1768640	-	AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5##AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like	0.99879	CTCF.p2:5:0.999
chr18	54536536	54536665	reg1011287.p1	10.566	+	TSC_hg19_v1_chr18_+_54424445 BC050352	-112152	+	TSC_hg19_v1_chr18_+_54318593 AK057141 NM_015285 NM_052834 AB011113 BC150282	-217994	+	TSC_hg19_v1_chr18_-_54305956 BC001156 AF003938 NM_004786	-230686	-	AK127964 TSC_hg19_v1_chr18_+_54814333 BC021740 BC035018 AK301799	277739	+	AB208996 NM_015879	483120	+	TSC_hg19_v1_chr18_+_55102810 NM_004852 Y18198 BC108925 BC108926	566265	+	BC050352|WDR7|23335|WD repeat domain 7##AK057141|WDR7|23335|WD repeat domain 7##NM_015285|WDR7|23335|WD repeat domain 7##NM_052834|WDR7|23335|WD repeat domain 7##AB011113|WDR7|23335|WD repeat domain 7##BC150282|WDR7|23335|WD repeat domain 7##BC001156|TXNL1|9352|thioredoxin-like 1##AF003938|TXNL1|9352|thioredoxin-like 1##NM_004786|TXNL1|9352|thioredoxin-like 1##AK127964|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC021740|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC035018|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK301799|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_004852|ONECUT2|9480|one cut homeobox 2##Y18198|ONECUT2|9480|one cut homeobox 2##BC108925|ONECUT2|9480|one cut homeobox 2##BC108926|ONECUT2|9480|one cut homeobox 2	0.505353	CTCF.p2:-5:0.505
chr3	55215120	55215218	reg1009188.p2	10.566	+	BC074741 AF225421 NM_020678	-253153	-	TSC_hg19_v1_chr3_+_54156691 AF516696 NM_018398	-1058478	+	BC137502 BC137505 TSC_hg19_v1_chr3_+_54156614	-1058570	+	TSC_hg19_v1_chr3_-_55514935 CU687936 AB590996 BC074783	299775	-	TSC_hg19_v1_chr3_-_55515377 L20861	300206	-	AK290869 TSC_hg19_v1_chr3_-_55515412	300239	-	BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF516696|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##NM_018398|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137502|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137505|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A##L20861|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A	0.834933	CTCF.p2:1:0.835
chr14	24802934	24803064	reg1010731.p1	10.565	+	NM_181657	-20687	+	TSC_hg19_v1_chr14_+_24780707 D89079 NM_001143919 U41070	-22305	+	TSC_hg19_v1_chr14_-_24780642 AK122828	-22350	-	BX248285 BC027943 AK122714 AK126468 NM_001198568 NM_001198592 NM_139247 TSC_hg19_v1_chr14_-_24804278	1266	-	AF156884 AY453693 AY494982 AY494983 CU692020 TSC_hg19_v1_chr14_-_24809197 BC062584 AK296309 BC041668 AK296140 AK075275 NM_006871	6140	-	AK310445 EU887632 EU887633 EU887634 NM_001136022 NM_001198967	33145	+	NM_181657|LTB4R|1241|leukotriene B4 receptor##D89079|LTB4R|1241|leukotriene B4 receptor##NM_001143919|LTB4R|1241|leukotriene B4 receptor##U41070|LTB4R|1241|leukotriene B4 receptor##AK122828|CIDEB|27141|cell death-inducing DFFA-like effector b##BX248285|ADCY4|196883|adenylate cyclase 4##BC027943|ADCY4|196883|adenylate cyclase 4##AK122714|ADCY4|196883|adenylate cyclase 4##AK126468|ADCY4|196883|adenylate cyclase 4##NM_001198568|ADCY4|196883|adenylate cyclase 4##NM_001198592|ADCY4|196883|adenylate cyclase 4##NM_139247|ADCY4|196883|adenylate cyclase 4##AF156884|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY453693|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494982|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494983|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC062584|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296309|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC041668|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296140|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK075275|RIPK3|11035|receptor-interacting serine-threonine kinase 3##NM_006871|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK310445|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887632|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887633|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887634|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001136022|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198967|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4	0.959859	CTCF.p2:0:0.960
chr6	64474334	64474478	reg1012516.p1	10.565	+	AF091622 BC113650 BC113652 NM_015153 D87685 AB385299	-117964	+	TSC_hg19_v1_chr6_+_64346027 BX648268 AK290491	-128389	+	TSC_hg19_v1_chr6_+_64345729 AK315868 AK298580	-128583	+	AY358133 NM_198283 AK310478	1815299	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	1942687	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	4124622	-	AF091622|PHF3|23469|PHD finger protein 3##BC113650|PHF3|23469|PHD finger protein 3##BC113652|PHF3|23469|PHD finger protein 3##NM_015153|PHF3|23469|PHD finger protein 3##D87685|PHF3|23469|PHD finger protein 3##BX648268|PHF3|23469|PHD finger protein 3##AK290491|PHF3|23469|PHD finger protein 3##AK315868|PHF3|23469|PHD finger protein 3##AK298580|PHF3|23469|PHD finger protein 3##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3	0.991154	CTCF.p2:19:0.991
chr17	73671131	73671244	reg1007519.p2	10.564	+	NM_013260 TSC_hg19_v1_chr17_+_73663441 AK095265 AK298060 BC030233 AY082382 BC007592 AF119664 BC063793 AK002202 AK310177 BC011724 AB464187 AF087869 CU675719 EU446793 BC013409 AK023157	-7754	+	BC063440 EF560729 TSC_hg19_v1_chr17_-_73663235 BC016911 AK075084 AK304168 AB042823 AB042824 AB042825 NM_001003715 NM_001003716 NM_004259	-7939	-	BC062771 NM_001162997 AK131023	-28506	+	NM_000213 NM_001005731 X53587 TSC_hg19_v1_chr17_+_73717539	46344	+	TSC_hg19_v1_chr17_+_73717581 X51841 BC126411 BC143738 BC143742 AK304792 AK310952	46386	+	BC118916 TSC_hg19_v1_chr17_+_73717603 AB208913	46414	+	NM_013260|SAP30BP|29115|SAP30 binding protein##AK095265|SAP30BP|29115|SAP30 binding protein##AK298060|SAP30BP|29115|SAP30 binding protein##BC030233|SAP30BP|29115|SAP30 binding protein##AY082382|SAP30BP|29115|SAP30 binding protein##BC007592|SAP30BP|29115|SAP30 binding protein##AF119664|SAP30BP|29115|SAP30 binding protein##BC063793|SAP30BP|29115|SAP30 binding protein##AK002202|SAP30BP|29115|SAP30 binding protein##AK310177|SAP30BP|29115|SAP30 binding protein##BC011724|SAP30BP|29115|SAP30 binding protein##AF087869|SAP30BP|29115|SAP30 binding protein##EU446793|SAP30BP|29115|SAP30 binding protein##BC013409|SAP30BP|29115|SAP30 binding protein##AK023157|SAP30BP|29115|SAP30 binding protein##BC063440|RECQL5|9400|RecQ protein-like 5##EF560729|RECQL5|9400|RecQ protein-like 5##BC016911|RECQL5|9400|RecQ protein-like 5##AK075084|RECQL5|9400|RecQ protein-like 5##AK304168|RECQL5|9400|RecQ protein-like 5##AB042823|RECQL5|9400|RecQ protein-like 5##AB042824|RECQL5|9400|RecQ protein-like 5##AB042825|RECQL5|9400|RecQ protein-like 5##NM_001003715|RECQL5|9400|RecQ protein-like 5##NM_001003716|RECQL5|9400|RecQ protein-like 5##NM_004259|RECQL5|9400|RecQ protein-like 5##BC062771|C17orf110|100130933|chromosome 17 open reading frame 110##NM_001162997|C17orf110|100130933|chromosome 17 open reading frame 110##AK131023|C17orf110|100130933|chromosome 17 open reading frame 110##NM_000213|ITGB4|3691|integrin, beta 4##NM_001005731|ITGB4|3691|integrin, beta 4##X53587|ITGB4|3691|integrin, beta 4##X51841|ITGB4|3691|integrin, beta 4##BC126411|ITGB4|3691|integrin, beta 4##BC143738|ITGB4|3691|integrin, beta 4##BC143742|ITGB4|3691|integrin, beta 4##AK304792|ITGB4|3691|integrin, beta 4##AK310952|ITGB4|3691|integrin, beta 4##BC118916|ITGB4|3691|integrin, beta 4##AB208913|ITGB4|3691|integrin, beta 4	0.976821	CTCF.p2:2:0.977
chr4	114702745	114702876	reg1010305.p1	10.564	+	TSC_hg19_v1_chr4_-_114682923 NM_001221 NM_172114 NM_172115 NM_172127 NM_172128 NM_172129	-19840	-	TSC_hg19_v1_chr4_-_114682619 AK055642 AB209288	-20154	-	BC022558 TSC_hg19_v1_chr4_-_114682567	-20244	-	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	198029	-	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	816773	+	NM_003360 U30930	840712	+	NM_001221|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172114|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172115|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172127|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172128|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172129|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK055642|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AB209288|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC022558|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8	0.548137	CTCF.p2:-6:0.548
chr5	59591402	59591514	reg1006670.p1	10.564	+	NM_001104631	-401838	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	-527003	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	-527110	-	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	192446	-	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	192582	+	TSC_hg19_v1_chr5_-_59995928 AF490257	404458	-	NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AF490257|DEPDC1B|55789|DEP domain containing 1B	0.347449	CTCF.p2:-35:0.347
chr11	71726817	71726953	reg1010338.p2	10.563	+	AF110799 AF110800 NM_001145055 AB590783 CU692186 AB019504	-15885	+	NM_001145057 AF122906	-16210	+	TSC_hg19_v1_chr11_+_71709954 NM_001039659 NM_001039660 NM_173044 AF215907 BC044215 AF110801 NM_005699 NM_173042	-16856	+	TSC_hg19_v1_chr11_-_71746967 AB463147	20092	-	TSC_hg19_v1_chr11_-_71752156 AK290509 AK309041	25258	-	TSC_hg19_v1_chr11_-_71781122 BC036808	54229	-	AF110799|IL18BP|10068|interleukin 18 binding protein##AF110800|IL18BP|10068|interleukin 18 binding protein##NM_001145055|IL18BP|10068|interleukin 18 binding protein##AB019504|IL18BP|10068|interleukin 18 binding protein##NM_001145057|IL18BP|10068|interleukin 18 binding protein##AF122906|IL18BP|10068|interleukin 18 binding protein##NM_001039659|IL18BP|10068|interleukin 18 binding protein##NM_001039660|IL18BP|10068|interleukin 18 binding protein##NM_173044|IL18BP|10068|interleukin 18 binding protein##AF215907|IL18BP|10068|interleukin 18 binding protein##BC044215|IL18BP|10068|interleukin 18 binding protein##AF110801|IL18BP|10068|interleukin 18 binding protein##NM_005699|IL18BP|10068|interleukin 18 binding protein##NM_173042|IL18BP|10068|interleukin 18 binding protein##AK290509|NUMA1|4926|nuclear mitotic apparatus protein 1##AK309041|NUMA1|4926|nuclear mitotic apparatus protein 1##BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1	0.979997	CTCF.p2:8:0.952
chr18	20143202	20143320	reg1009879.p1	10.563	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	-145436	-	X95701 BC027891 NM_005257 TSC_hg19_v1_chr18_+_19749549	-393785	+	AK123079 TSC_hg19_v1_chr18_-_19749029	-394275	-	TSC_hg19_v1_chr18_+_20513319 NM_002894 U72066 AK292481	370087	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	370554	+	EF028204 NM_001100619	572465	+	HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##X95701|GATA6|2627|GATA binding protein 6##BC027891|GATA6|2627|GATA binding protein 6##NM_005257|GATA6|2627|GATA binding protein 6##AK123079|LOC100128893|100128893|uncharacterized LOC100128893##NM_002894|RBBP8|5932|retinoblastoma binding protein 8##U72066|RBBP8|5932|retinoblastoma binding protein 8##AK292481|RBBP8|5932|retinoblastoma binding protein 8##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	0.903393	CTCF.p2:12:0.903
chr1	204776449	204776574	reg1005993.p2	10.562	+	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	-121920	-	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	-290901	+	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	-291009	+	TSC_hg19_v1_chr1_+_204797779 BC040674 NM_001005388 NM_001005389 NM_001160332 NM_001160333 NM_015090 AK295291 AK299262 AK090639 AX746553	21301	+	TSC_hg19_v1_chr1_+_204839989 AK308686	63472	+	NM_001160331 BC137013 BC144454 BC144455 AB384522	136887	+	AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2##AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC040674|NFASC|23114|neurofascin##NM_001005388|NFASC|23114|neurofascin##NM_001005389|NFASC|23114|neurofascin##NM_001160332|NFASC|23114|neurofascin##NM_001160333|NFASC|23114|neurofascin##NM_015090|NFASC|23114|neurofascin##AK295291|NFASC|23114|neurofascin##AK299262|NFASC|23114|neurofascin##AK090639|NFASC|23114|neurofascin##AK308686|NFASC|23114|neurofascin##NM_001160331|NFASC|23114|neurofascin##BC137013|NFASC|23114|neurofascin##BC144454|NFASC|23114|neurofascin##BC144455|NFASC|23114|neurofascin	1.869111	CTCF.p2:4:0.748	CTCF.p2:-40:0.559	CTCF.p2:53:0.562
chr17	42219137	42219233	reg1009037.p1	10.562	+	TSC_hg19_v1_chr17_-_42201010 NM_001015053 NM_005474	-18169	-	TSC_hg19_v1_chr17_-_42201007 AK294760 AB011172	-18203	-	NM_138387 TSC_hg19_v1_chr17_+_42148102 BC021574 BC062596 AK091417 AX746969 BC002494	-70986	+	TSC_hg19_v1_chr17_+_42219297 NM_001171251 NM_024032 AK291924	81	+	TSC_hg19_v1_chr17_+_42219306 AL834295	149	+	TSC_hg19_v1_chr17_+_42219388 BC000121 AK021656	218	+	NM_001015053|HDAC5|10014|histone deacetylase 5##NM_005474|HDAC5|10014|histone deacetylase 5##AK294760|HDAC5|10014|histone deacetylase 5##AB011172|HDAC5|10014|histone deacetylase 5##NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##NM_001171251|C17orf53|78995|chromosome 17 open reading frame 53##NM_024032|C17orf53|78995|chromosome 17 open reading frame 53##AK291924|C17orf53|78995|chromosome 17 open reading frame 53##AL834295|C17orf53|78995|chromosome 17 open reading frame 53##BC000121|C17orf53|78995|chromosome 17 open reading frame 53##AK021656|C17orf53|78995|chromosome 17 open reading frame 53	0.075913	
chr19	2236335	2236510	reg1010212.p1	10.562	+	CR457253 CU679203 TSC_hg19_v1_chr19_-_2236329 AK092742 AX747701 BC003084 BC008966 AK001159 NM_018049	-133	-	BC032803 TSC_hg19_v1_chr19_+_2232168	-4301	+	BC021037 TSC_hg19_v1_chr19_+_2222534	-13948	+	TSC_hg19_v1_chr19_-_2236650 AK098725	233	-	NM_007165 TSC_hg19_v1_chr19_+_2236834 AK314815 BC009903 BC041763 BC004434 BC015804	416	+	NM_000479	12690	+	CR457253|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK092742|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC003084|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC008966|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK001159|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##NM_018049|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##AK098725|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##NM_007165|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##AK314815|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##BC009903|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##BC004434|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##BC015804|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##NM_000479|AMH|268|anti-Mullerian hormone	0.0	
chr19	41035083	41035234	reg1013195.p1	10.562	+	AF082075 AF311855 NM_020971	-62071	+	TSC_hg19_v1_chr19_-_40971653 BC109371 AK312137 D26308 NM_000713	-63483	-	TSC_hg19_v1_chr19_-_40950243 BC050643 NM_203344	-84899	-	TSC_hg19_v1_chr19_+_41036379 AF311856 NM_025213	1222	+	TSC_hg19_v1_chr19_+_41036433 AK309418	1273	+	TSC_hg19_v1_chr19_+_41082760 NM_138392 AF258553 AK075057 AK300819	47591	+	AF082075|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AF311855|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_020971|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##BC109371|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##AK312137|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##D26308|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##NM_000713|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##BC050643|SERTAD3|29946|SERTA domain containing 3##NM_203344|SERTAD3|29946|SERTA domain containing 3##AF311856|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_025213|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AK309418|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_138392|SHKBP1|92799|SH3KBP1 binding protein 1##AF258553|SHKBP1|92799|SH3KBP1 binding protein 1##AK075057|SHKBP1|92799|SH3KBP1 binding protein 1##AK300819|SHKBP1|92799|SH3KBP1 binding protein 1	0.914905	CTCF.p2:10:0.915
chr7	96808903	96808993	reg1008936.p2	10.562	+	TSC_hg19_v1_chr7_+_96747012 BC022858 AF201933 BC020621	-61918	+	BC028409 NM_020186	-63044	+	BC006226 TSC_hg19_v1_chr7_-_96654144 AK023493 NM_005221 AK297614	-154754	-	NM_003182 NM_013996 NM_013997 NM_013998 U37529 AK222957 BC018047 X54469	552404	+	AK302242 AK000379 NM_001178077 NM_133436	692502	-	BC008723 TSC_hg19_v1_chr7_-_97501721 BC014621	692756	-	BC022858|ACN9|57001|ACN9 homolog (S. cerevisiae)##AF201933|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC020621|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC006226|DLX5|1749|distal-less homeobox 5##AK023493|DLX5|1749|distal-less homeobox 5##NM_005221|DLX5|1749|distal-less homeobox 5##AK297614|DLX5|1749|distal-less homeobox 5##NM_003182|TAC1|6863|tachykinin, precursor 1##NM_013996|TAC1|6863|tachykinin, precursor 1##NM_013997|TAC1|6863|tachykinin, precursor 1##NM_013998|TAC1|6863|tachykinin, precursor 1##U37529|TAC1|6863|tachykinin, precursor 1##AK222957|TAC1|6863|tachykinin, precursor 1##BC018047|TAC1|6863|tachykinin, precursor 1##X54469|TAC1|6863|tachykinin, precursor 1##AK302242|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK000379|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178077|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_133436|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC008723|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC014621|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)	0.999911	CTCF.p2:11:1.000
chr10	74594100	74594226	reg1010237.p1	10.561	+	TSC_hg19_v1_chr10_+_74451900 BC034235 NM_138357 AK075439 AK310455 AK311133 AK315519 AK301475 BC010682	-142279	+	TSC_hg19_v1_chr10_-_74385887 NM_001195518 NM_006077	-208246	-	TSC_hg19_v1_chr10_-_74385854 BC004190 BC004216	-208294	-	AK096435 NM_152635 BC126440 AY358339 AY013707 TSC_hg19_v1_chr10_+_74653529	59270	+	AF349540 BC093996 BC111946 BC143532 AY358032 NM_032562 AF339053 AK313712 TSC_hg19_v1_chr10_-_74714543	120348	-	AK311349 TSC_hg19_v1_chr10_-_74714574	120409	-	BC034235|MCU|90550|mitochondrial calcium uniporter##NM_138357|MCU|90550|mitochondrial calcium uniporter##AK075439|MCU|90550|mitochondrial calcium uniporter##AK310455|MCU|90550|mitochondrial calcium uniporter##AK311133|MCU|90550|mitochondrial calcium uniporter##AK315519|MCU|90550|mitochondrial calcium uniporter##AK301475|MCU|90550|mitochondrial calcium uniporter##BC010682|MCU|90550|mitochondrial calcium uniporter##NM_001195518|MICU1|10367|mitochondrial calcium uptake 1##NM_006077|MICU1|10367|mitochondrial calcium uptake 1##BC004190|MICU1|10367|mitochondrial calcium uptake 1##BC004216|MICU1|10367|mitochondrial calcium uptake 1##AK096435|OIT3|170392|oncoprotein induced transcript 3##NM_152635|OIT3|170392|oncoprotein induced transcript 3##BC126440|OIT3|170392|oncoprotein induced transcript 3##AY358339|OIT3|170392|oncoprotein induced transcript 3##AY013707|OIT3|170392|oncoprotein induced transcript 3##AF349540|PLA2G12B|84647|phospholipase A2, group XIIB##BC093996|PLA2G12B|84647|phospholipase A2, group XIIB##BC111946|PLA2G12B|84647|phospholipase A2, group XIIB##BC143532|PLA2G12B|84647|phospholipase A2, group XIIB##AY358032|PLA2G12B|84647|phospholipase A2, group XIIB##NM_032562|PLA2G12B|84647|phospholipase A2, group XIIB##AF339053|PLA2G12B|84647|phospholipase A2, group XIIB##AK313712|PLA2G12B|84647|phospholipase A2, group XIIB##AK311349|PLA2G12B|84647|phospholipase A2, group XIIB	0.878739	CTCF.p2:19:0.879
chr8	43136063	43136185	reg1010889.p1	10.561	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-140477	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-140491	+	TSC_hg19_v1_chr8_+_42995606 NM_152419	-140544	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	11481	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	5037371	+	TSC_hg19_v1_chr8_+_48173521 AK303579	5037395	+	BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_152419|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146	0.531756	CTCF.p2:-9:0.532
chr1	173389583	173389728	reg1010727.p1	10.560	+	CR542033 D90224 X79929 NM_003326	-213263	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	-215002	-	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	-369599	-	TSC_hg19_v1_chr1_-_173446300 AK127238	56653	-	TSC_hg19_v1_chr1_+_173446473 AK300680	56818	+	TSC_hg19_v1_chr1_+_173446484 BC035857 NM_004905 AK289352 BC025421 D14662 BC053550 CU690218 AJ844621	56872	+	CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK127238|LOC100506023|100506023|uncharacterized LOC100506023##AK300680|PRDX6|9588|peroxiredoxin 6##BC035857|PRDX6|9588|peroxiredoxin 6##NM_004905|PRDX6|9588|peroxiredoxin 6##AK289352|PRDX6|9588|peroxiredoxin 6##BC025421|PRDX6|9588|peroxiredoxin 6##D14662|PRDX6|9588|peroxiredoxin 6##BC053550|PRDX6|9588|peroxiredoxin 6##AJ844621|PRDX6|9588|peroxiredoxin 6	0.999963	CTCF.p2:11:1.000
chr20	61299963	61300122	reg1012446.p1	10.559	+	TSC_hg19_v1_chr20_+_61273854 BC015727 AK023410 AF205072 AF104334	-26195	+	TSC_hg19_v1_chr20_+_61273818 NM_016354	-26239	+	TSC_hg19_v1_chr20_+_61147924 BC110595	-152088	+	TSC_hg19_v1_chr20_+_61340165 NM_002531 X70070	40134	+	AK001776 NM_018270 TSC_hg19_v1_chr20_+_61427832 BC014235 BC009889 BC018841 AB085682 AB463516	127805	+	TSC_hg19_v1_chr20_+_61436186 NM_007346 AK314696 AK022234 AF109134 BC008768 BC014137 CU680798 DQ892943 EU176723 BC032666	136151	+	BC015727|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AK023410|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AF205072|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AF104334|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##NM_016354|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##BC110595|C20orf166|128826|chromosome 20 open reading frame 166##NM_002531|NTSR1|4923|neurotensin receptor 1 (high affinity)##X70070|NTSR1|4923|neurotensin receptor 1 (high affinity)##AK001776|C20orf20|55257|chromosome 20 open reading frame 20##NM_018270|C20orf20|55257|chromosome 20 open reading frame 20##BC014235|C20orf20|55257|chromosome 20 open reading frame 20##BC009889|C20orf20|55257|chromosome 20 open reading frame 20##BC018841|C20orf20|55257|chromosome 20 open reading frame 20##AB085682|C20orf20|55257|chromosome 20 open reading frame 20##NM_007346|OGFR|11054|opioid growth factor receptor##AK314696|OGFR|11054|opioid growth factor receptor##AK022234|OGFR|11054|opioid growth factor receptor##AF109134|OGFR|11054|opioid growth factor receptor##BC008768|OGFR|11054|opioid growth factor receptor##BC014137|OGFR|11054|opioid growth factor receptor##DQ892943|OGFR|11054|opioid growth factor receptor##EU176723|OGFR|11054|opioid growth factor receptor##BC032666|OGFR|11054|opioid growth factor receptor	0.11383	
chr8	144110825	144110932	reg1010443.p1	10.559	+	TSC_hg19_v1_chr8_+_144102304 BC119708 BC119709 AB529045 U56145	-8551	+	TSC_hg19_v1_chr8_+_144099945 NM_001127213 NM_002346 AK223074 AK129615 AK311983 BC003392 U42376 Z68179	-10936	+	AB463555 NM_000498 X54741	-111622	-	TSC_hg19_v1_chr8_+_144120683 BC073830 AK094450 NM_173687 BC120993 BC063497	9797	+	NM_002347	130578	-	BC030192 AB012293 TSC_hg19_v1_chr8_-_144241700	130811	-	BC119708|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119709|LY6E|4061|lymphocyte antigen 6 complex, locus E##U56145|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_001127213|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002346|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK223074|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK129615|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK311983|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC003392|LY6E|4061|lymphocyte antigen 6 complex, locus E##U42376|LY6E|4061|lymphocyte antigen 6 complex, locus E##Z68179|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_000498|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##X54741|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##BC073830|C8orf31|286122|chromosome 8 open reading frame 31##AK094450|C8orf31|286122|chromosome 8 open reading frame 31##NM_173687|C8orf31|286122|chromosome 8 open reading frame 31##BC120993|C8orf31|286122|chromosome 8 open reading frame 31##BC063497|C8orf31|286122|chromosome 8 open reading frame 31##NM_002347|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H##AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H	0.992363	CTCF.p2:2:0.992
chr8	65480307	65480428	reg1010241.p1	10.559	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-1399167	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-1399223	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-1481740	-	NM_152414 AK293979	12491	+	TSC_hg19_v1_chr8_+_65493611 AK091333	13297	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	230912	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.99961	CTCF.p2:1:1.000
chr19	52642571	52642711	reg1009813.p1	10.558	+	TSC_hg19_v1_chr19_-_52598972 AK131409 NM_001136499	-43642	-	BC002858 NM_014650 AK292827	-90553	-	BC101392 BC101393 BC101394 BC101395 AK309346 BC004930 AK097156 NM_025040 TSC_hg19_v1_chr19_-_52531812	-110971	-	BC033199 AK092266 AX747442 NM_178523	538	-	BC011784 NM_001102657	32254	-	NM_014225 TSC_hg19_v1_chr19_+_52693204	50499	+	AK131409|ZNF841|284371|zinc finger protein 841##NM_001136499|ZNF841|284371|zinc finger protein 841##BC002858|ZNF432|9668|zinc finger protein 432##NM_014650|ZNF432|9668|zinc finger protein 432##AK292827|ZNF432|9668|zinc finger protein 432##BC101392|ZNF614|80110|zinc finger protein 614##BC101393|ZNF614|80110|zinc finger protein 614##BC101394|ZNF614|80110|zinc finger protein 614##BC101395|ZNF614|80110|zinc finger protein 614##AK309346|ZNF614|80110|zinc finger protein 614##BC004930|ZNF614|80110|zinc finger protein 614##AK097156|ZNF614|80110|zinc finger protein 614##NM_025040|ZNF614|80110|zinc finger protein 614##BC033199|ZNF616|90317|zinc finger protein 616##AK092266|ZNF616|90317|zinc finger protein 616##NM_178523|ZNF616|90317|zinc finger protein 616##BC011784|ZNF836|162962|zinc finger protein 836##NM_001102657|ZNF836|162962|zinc finger protein 836##NM_014225|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha	1.754811	CTCF.p2:-8:0.868	CTCF.p2:12:0.887
chr21	33158298	33158421	reg1010016.p1	10.558	+	TSC_hg19_v1_chr21_-_33104407 BC014921 NM_001145444 NM_001145445 NM_020706	-53923	-	BC043353 TSC_hg19_v1_chr21_-_33104396	-53966	-	AL834304 BC052286 BC064990 TSC_hg19_v1_chr21_-_33104271 AK057840 AK308406	-54087	-	TSC_hg19_v1_chr21_+_33245863 AJ271722 NM_014586	87361	+	CU692128 TSC_hg19_v1_chr21_-_33651338 AF387845 AF231921 AK075281 BC042917 NM_018944 AK312073	493036	-	AF454915 AF454916 NM_178817 NM_206898	505764	+	BC014921|SCAF4|57466|SR-related CTD-associated factor 4##NM_001145444|SCAF4|57466|SR-related CTD-associated factor 4##NM_001145445|SCAF4|57466|SR-related CTD-associated factor 4##NM_020706|SCAF4|57466|SR-related CTD-associated factor 4##BC043353|SCAF4|57466|SR-related CTD-associated factor 4##AL834304|SCAF4|57466|SR-related CTD-associated factor 4##BC052286|SCAF4|57466|SR-related CTD-associated factor 4##BC064990|SCAF4|57466|SR-related CTD-associated factor 4##AK057840|SCAF4|57466|SR-related CTD-associated factor 4##AK308406|SCAF4|57466|SR-related CTD-associated factor 4##AJ271722|HUNK|30811|hormonally up-regulated Neu-associated kinase##NM_014586|HUNK|30811|hormonally up-regulated Neu-associated kinase##AF387845|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AF231921|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AK075281|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##BC042917|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##NM_018944|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AK312073|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AF454915|MRAP|56246|melanocortin 2 receptor accessory protein##AF454916|MRAP|56246|melanocortin 2 receptor accessory protein##NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein##NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein	0.996914	CTCF.p2:18:0.997
chr2	36579298	36579388	reg1010314.p1	10.558	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-2754998	-	AB020653 NM_015376	-2840402	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-2877647	+	TSC_hg19_v1_chr2_+_36582920 AY358371	3619	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	4059	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	245939	-	BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	0.957793	CTCF.p2:16:0.958
chr4	151788341	151788477	reg1010544.p1	10.558	+	TSC_hg19_v1_chr4_-_151773972 BC172218	-14415	-	TSC_hg19_v1_chr4_-_151770612 AB208838	-17760	-	NM_006439	-285333	+	TSC_hg19_v1_chr4_-_151936437 AF467287 NM_001199282 BC064834	148009	-	AF216648 NM_006726	148239	-	TSC_hg19_v1_chr4_-_151936880 AK098039	148481	-	AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AF467287|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_001199282|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##BC064834|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##AF216648|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_006726|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##AK098039|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.943379	CTCF.p2:10:0.943
chr4	99916428	99916555	reg1008415.p1	10.558	+	NM_001130679 NM_001968 BC035166	-64705	-	M15353 TSC_hg19_v1_chr4_-_99850288	-66200	-	AK300982 NM_001130678 AB528981 DQ890728 DQ893903 TSC_hg19_v1_chr4_-_99850278 BC012611 BC107715 AK295083	-66231	-	NM_015143 TSC_hg19_v1_chr4_+_99916843	324	+	TSC_hg19_v1_chr4_+_99916871 AK304239	368	+	TSC_hg19_v1_chr4_+_99916874 D42084 AB385277	397	+	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E##NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E##BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E##M15353|EIF4E|1977|eukaryotic translation initiation factor 4E##AK300982|EIF4E|1977|eukaryotic translation initiation factor 4E##NM_001130678|EIF4E|1977|eukaryotic translation initiation factor 4E##DQ890728|EIF4E|1977|eukaryotic translation initiation factor 4E##DQ893903|EIF4E|1977|eukaryotic translation initiation factor 4E##BC012611|EIF4E|1977|eukaryotic translation initiation factor 4E##BC107715|EIF4E|1977|eukaryotic translation initiation factor 4E##NM_015143|METAP1|23173|methionyl aminopeptidase 1##AK304239|METAP1|23173|methionyl aminopeptidase 1##D42084|METAP1|23173|methionyl aminopeptidase 1	0.216458	CTCF.p2:22:0.216
chr5	96478469	96478616	reg1010040.p2	10.558	+	AK291034 TSC_hg19_v1_chr5_-_96478504 NM_153234 AK098400	-4	-	AK307885 TSC_hg19_v1_chr5_-_96478482	-67	-	BC036467 TSC_hg19_v1_chr5_-_96478440	-100	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	40366	-	TSC_hg19_v1_chr5_-_96518945 AK002021	40400	-	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	40445	-	AK291034|LIX1|167410|Lix1 homolog (chicken)##NM_153234|LIX1|167410|Lix1 homolog (chicken)##AK098400|LIX1|167410|Lix1 homolog (chicken)##AK307885|LIX1|167410|Lix1 homolog (chicken)##BC036467|LIX1|167410|Lix1 homolog (chicken)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)	0.010662	
chr2	154375909	154376041	reg1011845.p1	10.557	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-40724	-	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-800831	+	BC028741 TSC_hg19_v1_chr2_+_153575133	-800844	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	352469	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	1179214	+	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	2810715	-	AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##BC028741|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	0.999704	CTCF.p2:14:1.000
chr9	5600617	5600743	reg1010760.p1	10.556	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	-90017	+	TSC_hg19_v1_chr9_+_5450455 NM_014143 DQ836393 AK300470 AK314567 AF233516 BC069381	-150173	+	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	-162800	-	TSC_hg19_v1_chr9_+_5629121 NM_001135920 NM_001206557 NM_020829	28447	+	BC036853 TSC_hg19_v1_chr9_-_5630098	29410	-	AL834191 AB058718 TSC_hg19_v1_chr9_-_5833045 BC136771 BC136773 BC144404	232271	-	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_014143|CD274|29126|CD274 molecule##DQ836393|CD274|29126|CD274 molecule##AK300470|CD274|29126|CD274 molecule##AK314567|CD274|29126|CD274 molecule##AF233516|CD274|29126|CD274 molecule##BC069381|CD274|29126|CD274 molecule##BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46##NM_001135920|KIAA1432|57589|KIAA1432##NM_001206557|KIAA1432|57589|KIAA1432##NM_020829|KIAA1432|57589|KIAA1432##BC036853|C9orf46|55848|chromosome 9 open reading frame 46##AL834191|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AB058718|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136771|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136773|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC144404|ERMP1|79956|endoplasmic reticulum metallopeptidase 1	0.948201	CTCF.p2:3:0.948
chr12	122062635	122062733	reg1008616.p1	10.555	+	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	-43770	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	-44425	-	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	-157610	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	1959	+	BC057760 NM_173855	44875	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	88060	+	BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B	0.994851	CTCF.p2:2:0.995
chr1	167312180	167312307	reg1011280.p1	10.554	+	TSC_hg19_v1_chr1_+_167298389 AY113189 BC001664 BC003571	-13804	+	NM_001198783 TSC_hg19_v1_chr1_+_167298306	-13945	+	TSC_hg19_v1_chr1_+_167190127 NM_001198786 NM_002697 AK302525 AK303201 AK308004 AK091438 S66901 BC052274 X13403	-122186	+	AB590419 CU693020 DQ893778 EU176191 X55510 X55511 X55512 BC025703 AK128376 AK313946 J04132 AK223325 NM_000734 NM_198053	175530	-	DQ891131 DQ894310 AB463481 AY359071 BC006786 BC008628 TSC_hg19_v1_chr1_-_167523000 AK130006 AK315497 AK075375 AK095456 AF084523	210748	-	TSC_hg19_v1_chr1_-_167523043 NM_003851	210820	-	AY113189|POU2F1|5451|POU class 2 homeobox 1##BC001664|POU2F1|5451|POU class 2 homeobox 1##BC003571|POU2F1|5451|POU class 2 homeobox 1##NM_001198783|POU2F1|5451|POU class 2 homeobox 1##NM_001198786|POU2F1|5451|POU class 2 homeobox 1##NM_002697|POU2F1|5451|POU class 2 homeobox 1##AK302525|POU2F1|5451|POU class 2 homeobox 1##AK303201|POU2F1|5451|POU class 2 homeobox 1##AK308004|POU2F1|5451|POU class 2 homeobox 1##AK091438|POU2F1|5451|POU class 2 homeobox 1##BC052274|POU2F1|5451|POU class 2 homeobox 1##X13403|POU2F1|5451|POU class 2 homeobox 1##DQ893778|CD247|919|CD247 molecule##EU176191|CD247|919|CD247 molecule##X55510|CD247|919|CD247 molecule##X55511|CD247|919|CD247 molecule##X55512|CD247|919|CD247 molecule##BC025703|CD247|919|CD247 molecule##AK128376|CD247|919|CD247 molecule##AK313946|CD247|919|CD247 molecule##J04132|CD247|919|CD247 molecule##AK223325|CD247|919|CD247 molecule##NM_000734|CD247|919|CD247 molecule##NM_198053|CD247|919|CD247 molecule##DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1##NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1	0.670322	CTCF.p2:21:0.670
chr14	23538203	23538334	reg1010025.p1	10.554	+	AK057922 BC110867 TSC_hg19_v1_chr14_-_23526749 AK307746 BX248750 BC142724 AK289576 NM_022478 NM_144985	-11492	-	AK122797 NM_001099780 AB299437 AB590974	-26864	+	NM_001144932 NM_002797 NM_001130725	-33878	-	AF124727 BX247975 TSC_hg19_v1_chr14_-_23540768 AF124728	2482	-	TSC_hg19_v1_chr14_-_23540779 NM_001164816 NM_001164817	2515	-	TSC_hg19_v1_chr14_+_23563968 AK024794	25665	+	AK057922|CDH24|64403|cadherin 24, type 2##BC110867|CDH24|64403|cadherin 24, type 2##AK307746|CDH24|64403|cadherin 24, type 2##BX248750|CDH24|64403|cadherin 24, type 2##BC142724|CDH24|64403|cadherin 24, type 2##AK289576|CDH24|64403|cadherin 24, type 2##NM_022478|CDH24|64403|cadherin 24, type 2##NM_144985|CDH24|64403|cadherin 24, type 2##AK122797|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##NM_001099780|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##AB299437|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##NM_001144932|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_002797|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_001130725|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AF124727|ACIN1|22985|apoptotic chromatin condensation inducer 1##BX247975|ACIN1|22985|apoptotic chromatin condensation inducer 1##AF124728|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164816|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164817|ACIN1|22985|apoptotic chromatin condensation inducer 1##AK024794|C14orf119|55017|chromosome 14 open reading frame 119	1.737104	CTCF.p2:30:0.988	CTCF.p2:-35:0.749
chr22	33599320	33599460	reg1012372.p1	10.554	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-145035	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-196664	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-401638	+	AJ007583 AB011181 NM_004737 NM_133642	716980	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1862759	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	2054086	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.578415	CTCF.p2:10:0.578
chr4	4337090	4337211	reg1009846.p2	10.554	+	AK292551 NM_145291 TSC_hg19_v1_chr4_+_4291977 AK127560 AL832751 BC109087 BC109088	-45180	+	TSC_hg19_v1_chr4_-_4291900 NM_017816	-45238	-	TSC_hg19_v1_chr4_-_4291848 AK000432 BC015796 AK290750	-45300	-	AK125172 NM_001040101 NM_014392	50832	+	TSC_hg19_v1_chr4_+_4388753 AX775767 BC001745	51594	+	TSC_hg19_v1_chr4_+_4388828 AK299657 AK312288 AK301911	51669	+	AK292551|ZBTB49|166793|zinc finger and BTB domain containing 49##NM_145291|ZBTB49|166793|zinc finger and BTB domain containing 49##AK127560|ZBTB49|166793|zinc finger and BTB domain containing 49##AL832751|ZBTB49|166793|zinc finger and BTB domain containing 49##BC109087|ZBTB49|166793|zinc finger and BTB domain containing 49##BC109088|ZBTB49|166793|zinc finger and BTB domain containing 49##NM_017816|LYAR|55646|Ly1 antibody reactive homolog (mouse)##AK000432|LYAR|55646|Ly1 antibody reactive homolog (mouse)##BC015796|LYAR|55646|Ly1 antibody reactive homolog (mouse)##AK290750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##AK125172|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##NM_001040101|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##NM_014392|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##BC001745|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK299657|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK312288|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK301911|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence	0.957154	CTCF.p2:9:0.957
chr1	233376944	233377074	reg1009547.p2	10.553	+	TSC_hg19_v1_chr1_+_233086381 AF416713	-290620	+	AK311229 AK316591 TSC_hg19_v1_chr1_+_233086356 BC005102 NM_032324	-290665	+	AK290216 TSC_hg19_v1_chr1_+_232941173 BC036663 AB037804	-435858	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	54474	-	AJ311797 AJ311798 NM_032435 BC136648 BC136649	86574	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	372814	+	AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK311229|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK316591|NTPCR|84284|nucleoside-triphosphatase, cancer-related##BC005102|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_032324|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK290216|KIAA1383|54627|KIAA1383##BC036663|KIAA1383|54627|KIAA1383##AB037804|KIAA1383|54627|KIAA1383##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1	0.931859	CTCF.p2:8:0.932
chr16	70365628	70365743	reg1009591.p2	10.553	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-32537	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-32609	+	TSC_hg19_v1_chr16_-_70323413 AK222824 AK225116 AK307782 D32050 NM_001605	-42274	-	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	15143	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	107296	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	122814	+	AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK222824|AARS|16|alanyl-tRNA synthetase##AK225116|AARS|16|alanyl-tRNA synthetase##AK307782|AARS|16|alanyl-tRNA synthetase##D32050|AARS|16|alanyl-tRNA synthetase##NM_001605|AARS|16|alanyl-tRNA synthetase##AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase	0.977983	CTCF.p2:-7:0.978
chr19	41480600	41480720	reg1010683.p1	10.553	+	AK307933 AK310944 TSC_hg19_v1_chr19_+_41430151 BC041174 M29873 DQ198366 DQ198367	-50510	+	NM_000764 NM_030589	-92004	-	X13929 X13897 AF182275 M33318 X13930 BC096253 BC096254 BC096255 BC096256 AK309594 TSC_hg19_v1_chr19_-_41356353 AK307740 AK312964 NM_000762	-124386	-	TSC_hg19_v1_chr19_+_41497188 BC067430 BC067431 NM_000767 M29874 AF182277	16535	+	X13494 TSC_hg19_v1_chr19_+_41497329	16647	+	TSC_hg19_v1_chr19_+_41509850 AK301620	29186	+	AK307933|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##AK310944|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##BC041174|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##M29873|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##DQ198366|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##DQ198367|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##NM_000764|CYP2A7|1549|cytochrome P450, family 2, subfamily A, polypeptide 7##NM_030589|CYP2A7|1549|cytochrome P450, family 2, subfamily A, polypeptide 7##X13929|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##X13897|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AF182275|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##M33318|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096253|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096254|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096255|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096256|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK309594|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK307740|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK312964|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##NM_000762|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC067430|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##BC067431|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##NM_000767|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##M29874|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##AF182277|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##X13494|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##AK301620|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6	0.999749	CTCF.p2:-9:1.000
chr4	186562104	186562237	reg1009183.p1	10.553	+	AK129863 BT007341 AB528880 CU674500 TSC_hg19_v1_chr4_-_186456662 AK222966 AF002280 AF002282 BC027870 AF039018 BC001017 AK313253 NM_001114107 NM_014476	-105525	-	BC038515 AK302815 AL833337 TSC_hg19_v1_chr4_-_186392907 AB080722 BC028419 BX641119 AK097605 NM_001145411 NM_152775	-169286	-	BC127739 BC141968 BC150574 NM_001114357	-211627	+	AK304653 TSC_hg19_v1_chr4_-_186577879 AK296461	15708	-	AK056758 NM_001145674 NM_001145675	15952	-	AK225812 NM_001145673	134895	-	AK129863|PDLIM3|27295|PDZ and LIM domain 3##BT007341|PDLIM3|27295|PDZ and LIM domain 3##AK222966|PDLIM3|27295|PDZ and LIM domain 3##AF002280|PDLIM3|27295|PDZ and LIM domain 3##AF002282|PDLIM3|27295|PDZ and LIM domain 3##BC027870|PDLIM3|27295|PDZ and LIM domain 3##AF039018|PDLIM3|27295|PDZ and LIM domain 3##BC001017|PDLIM3|27295|PDZ and LIM domain 3##AK313253|PDLIM3|27295|PDZ and LIM domain 3##NM_001114107|PDLIM3|27295|PDZ and LIM domain 3##NM_014476|PDLIM3|27295|PDZ and LIM domain 3##BC038515|CCDC110|256309|coiled-coil domain containing 110##AK302815|CCDC110|256309|coiled-coil domain containing 110##AL833337|CCDC110|256309|coiled-coil domain containing 110##AB080722|CCDC110|256309|coiled-coil domain containing 110##BC028419|CCDC110|256309|coiled-coil domain containing 110##BX641119|CCDC110|256309|coiled-coil domain containing 110##AK097605|CCDC110|256309|coiled-coil domain containing 110##NM_001145411|CCDC110|256309|coiled-coil domain containing 110##NM_152775|CCDC110|256309|coiled-coil domain containing 110##BC127739|C4orf47|441054|chromosome 4 open reading frame 47##BC141968|C4orf47|441054|chromosome 4 open reading frame 47##BC150574|C4orf47|441054|chromosome 4 open reading frame 47##NM_001114357|C4orf47|441054|chromosome 4 open reading frame 47##AK304653|SORBS2|8470|sorbin and SH3 domain containing 2##AK296461|SORBS2|8470|sorbin and SH3 domain containing 2##AK056758|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145674|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145675|SORBS2|8470|sorbin and SH3 domain containing 2##AK225812|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145673|SORBS2|8470|sorbin and SH3 domain containing 2	0.995942	CTCF.p2:-6:0.996
chr12	49247139	49247272	reg1009667.p1	10.552	+	AF026402 BC002366 TSC_hg19_v1_chr12_-_49245925 AK294877 AK312379 AK128428 AK292921 NM_004818	-1273	-	NM_000725 NM_001206915 TSC_hg19_v1_chr12_+_49212307	-34922	+	TSC_hg19_v1_chr12_+_49209373 NM_001206916 AK297639 AK316323	-37869	+	AF498967 Y07923 AB464152 AB040147 AK292762 BC026356 NM_014470	12395	-	NM_033124 AK302082 AK093051 AX747886 AF382188 AK314623 BC039317	50717	+	NM_001143781	71458	-	AF026402|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##BC002366|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK294877|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK312379|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK128428|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK292921|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##NM_004818|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_001206915|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_001206916|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK297639|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK316323|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AF498967|RND1|27289|Rho family GTPase 1##Y07923|RND1|27289|Rho family GTPase 1##AB040147|RND1|27289|Rho family GTPase 1##AK292762|RND1|27289|Rho family GTPase 1##BC026356|RND1|27289|Rho family GTPase 1##NM_014470|RND1|27289|Rho family GTPase 1##NM_033124|CCDC65|85478|coiled-coil domain containing 65##AK302082|CCDC65|85478|coiled-coil domain containing 65##AK093051|CCDC65|85478|coiled-coil domain containing 65##AF382188|CCDC65|85478|coiled-coil domain containing 65##AK314623|CCDC65|85478|coiled-coil domain containing 65##BC039317|CCDC65|85478|coiled-coil domain containing 65##NM_001143781|FKBP11|51303|FK506 binding protein 11, 19 kDa	0.059876	
chr22	23516246	23516347	reg1009794.p1	10.552	+	AB023061 NM_004914 BC104989 BC104991 CR456553 AF133588 AB527204 AY336745 CU013153 CU013441 AK296052 TSC_hg19_v1_chr22_+_23487674	-28692	+	BC008986 AF133587 NM_014433 AK299530 AK310327	-32053	-	AK312519 TSC_hg19_v1_chr22_+_23412728 AK293653	-103567	+	NM_004327 NM_021574 Y00661 TSC_hg19_v1_chr22_+_23522690	6324	+	TSC_hg19_v1_chr22_+_23522713 BC066122	6417	+	TSC_hg19_v1_chr22_+_23522745 AB209991	6504	+	AB023061|RAB36|9609|RAB36, member RAS oncogene family##NM_004914|RAB36|9609|RAB36, member RAS oncogene family##BC104989|RAB36|9609|RAB36, member RAS oncogene family##BC104991|RAB36|9609|RAB36, member RAS oncogene family##CR456553|RAB36|9609|RAB36, member RAS oncogene family##AF133588|RAB36|9609|RAB36, member RAS oncogene family##AY336745|RAB36|9609|RAB36, member RAS oncogene family##CU013153|RAB36|9609|RAB36, member RAS oncogene family##CU013441|RAB36|9609|RAB36, member RAS oncogene family##AK296052|RAB36|9609|RAB36, member RAS oncogene family##BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1##AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1##NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK312519|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK293653|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##NM_004327|BCR|613|breakpoint cluster region##NM_021574|BCR|613|breakpoint cluster region##Y00661|BCR|613|breakpoint cluster region##BC066122|BCR|613|breakpoint cluster region##AB209991|BCR|613|breakpoint cluster region	0.519434	CTCF.p2:-13:0.519
chr3	52854894	52855024	reg1010655.p1	10.551	+	NM_002217 TSC_hg19_v1_chr3_+_52828811 X67055 AK222757 AK298450 BC107604 BC107605 BC107814	-26160	+	AK303156 NM_001166435 AK303110 NM_001166436	-41021	+	X16260 NM_001166434 AK298455	-42479	+	AK298407 AK298412 AK298429 D38595 BC136392 BC136393 TSC_hg19_v1_chr3_-_52864689 AK303769 NM_001166449 NM_002218	9742	-	NM_205853	14275	-	TSC_hg19_v1_chr3_-_52931547 AY726591 BC047015	76490	-	NM_002217|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##X67055|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##AK222757|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##AK298450|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##BC107604|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##BC107605|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##BC107814|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##AK303156|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##NM_001166435|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##AK303110|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##NM_001166436|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##X16260|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##NM_001166434|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##AK298455|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##AK298407|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##AK298412|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##AK298429|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##D38595|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##BC136392|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##BC136393|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##AK303769|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##NM_001166449|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##NM_002218|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##NM_205853|MUSTN1|389125|musculoskeletal, embryonic nuclear protein 1##AY726591|TMEM110|375346|transmembrane protein 110##BC047015|TMEM110|375346|transmembrane protein 110	0.440771	CTCF.p2:13:0.441
chr5	142268198	142268312	reg1008231.p2	10.551	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-117947	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-118283	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-190684	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	514568	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	514851	-	BC015610 TSC_hg19_v1_chr5_-_142783214	514956	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.997866	CTCF.p2:-2:0.998
chr8	80677551	80677709	reg1011902.p1	10.551	+	AK292737 TSC_hg19_v1_chr8_+_80523376 BC006302 S82024 AB528346 BT020034 CR456833 DQ892719 DQ895968 CU675343	-154227	+	TSC_hg19_v1_chr8_+_80523354 AK297594 AK308557 AK297485	-154271	+	AK299500 TSC_hg19_v1_chr8_+_80523339	-154291	+	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	2367	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	264872	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	315399	-	AK292737|STMN2|11075|stathmin-like 2##BC006302|STMN2|11075|stathmin-like 2##S82024|STMN2|11075|stathmin-like 2##BT020034|STMN2|11075|stathmin-like 2##CR456833|STMN2|11075|stathmin-like 2##DQ892719|STMN2|11075|stathmin-like 2##DQ895968|STMN2|11075|stathmin-like 2##AK297594|STMN2|11075|stathmin-like 2##AK308557|STMN2|11075|stathmin-like 2##AK297485|STMN2|11075|stathmin-like 2##AK299500|STMN2|11075|stathmin-like 2##AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52	0.993708	CTCF.p2:10:0.994
chr16	65152003	65152122	reg1009986.p2	10.550	+	AK124734 NM_001796	-3081324	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-6383865	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-6433406	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	3840	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	3906	-	TSC_hg19_v1_chr16_-_65155987 AK297377	3932	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.999029	CTCF.p2:9:0.999
chr8	64515304	64515415	reg1010619.p1	10.550	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-434159	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-434215	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-516732	-	NM_152414 AK293979	977499	+	TSC_hg19_v1_chr8_+_65493611 AK091333	978305	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	1195920	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.365412	CTCF.p2:4:0.365
chr9	100716952	100717079	reg1010197.p1	10.550	+	AF228713 AF322875 BC048324 AK292441 NM_018437	-9898	-	AF306683 AF306682 AL833094 AY255672 NM_197978 AY244805	-16494	-	TSC_hg19_v1_chr9_-_100684783 CU678254 DQ892983 DQ896231 AY189280 AF151053 AK309270 BC002863 AK000213 AK302701 NM_016481	-32205	-	TSC_hg19_v1_chr9_+_100745521 NM_006401	28490	+	TSC_hg19_v1_chr9_+_100745633 AK223454 AK313733 U70439	28598	+	TSC_hg19_v1_chr9_+_100745652 BC019658 Y07570 BC013003	28637	+	AF228713|HEMGN|55363|hemogen##AF322875|HEMGN|55363|hemogen##BC048324|HEMGN|55363|hemogen##AK292441|HEMGN|55363|hemogen##NM_018437|HEMGN|55363|hemogen##AF306683|HEMGN|55363|hemogen##AF306682|HEMGN|55363|hemogen##AL833094|HEMGN|55363|hemogen##AY255672|HEMGN|55363|hemogen##NM_197978|HEMGN|55363|hemogen##AY244805|HEMGN|55363|hemogen##DQ892983|C9orf156|51531|chromosome 9 open reading frame 156##DQ896231|C9orf156|51531|chromosome 9 open reading frame 156##AY189280|C9orf156|51531|chromosome 9 open reading frame 156##AF151053|C9orf156|51531|chromosome 9 open reading frame 156##AK309270|C9orf156|51531|chromosome 9 open reading frame 156##BC002863|C9orf156|51531|chromosome 9 open reading frame 156##AK000213|C9orf156|51531|chromosome 9 open reading frame 156##AK302701|C9orf156|51531|chromosome 9 open reading frame 156##NM_016481|C9orf156|51531|chromosome 9 open reading frame 156##NM_006401|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##AK223454|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##AK313733|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##U70439|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##BC019658|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##Y07570|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##BC013003|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	0.277655	
chr1	8731485	8731618	reg1010281.p1	10.549	+	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	-247534	-	NM_001080397	-347162	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-645153	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	146041	-	GU170215 NM_001201483	200083	-	BC001810 TSC_hg19_v1_chr1_-_8938710 AK098420 M14328 BC011130	207156	-	AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##GU170215|ENO1|2023|enolase 1, (alpha)##NM_001201483|ENO1|2023|enolase 1, (alpha)##BC001810|ENO1|2023|enolase 1, (alpha)##AK098420|ENO1|2023|enolase 1, (alpha)##M14328|ENO1|2023|enolase 1, (alpha)##BC011130|ENO1|2023|enolase 1, (alpha)	0.570631	CTCF.p2:6:0.571
chr2	232316802	232316939	reg1012158.p1	10.549	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	-56448	+	TSC_hg19_v1_chr2_+_232120778 AB055779	-196092	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-253476	+	AK001314 TSC_hg19_v1_chr2_-_232326464	9559	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	12265	-	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	12365	-	AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AY929062|ARMC9|80210|armadillo repeat containing 9##AK001314|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin##BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin	0.999674	CTCF.p2:3:1.000
chr6	15390646	15390798	reg1009476.p2	10.549	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-141609	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-141821	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-144310	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	272455	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	272568	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	738580	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.756649	CTCF.p2:16:0.757
chr8	12516948	12517090	reg1012499.p1	10.549	+	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-223115	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-223176	-	DQ012022 NM_001037804 NM_001195257	-341195	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	95985	-	AK296010 NM_020844	286147	+	AB040889 NM_001099677	352753	+	BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456	0.999649	CTCF.p2:11:1.000
chr15	39418257	39418373	reg1007823.p1	10.547	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-429517	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-561384	-	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-671970	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	124610	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	455014	+	AK093308 AX748045 BC045191 NM_152597	656713	-	AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.153851	
chr17	43505553	43505679	reg1012003.p1	10.547	+	TSC_hg19_v1_chr17_-_43503000 AK125535 NM_199282	-2615	-	TSC_hg19_v1_chr17_-_43487753 AK092891 AX747793 AK300880	-17866	-	TSC_hg19_v1_chr17_-_43394387 BC035576 BC022296 AK290203 AK313085 NM_003954	-111241	-	TSC_hg19_v1_chr17_-_43510237 AK290650	4611	-	TSC_hg19_v1_chr17_-_43510292 BC067345 NM_174919	4671	-	TSC_hg19_v1_chr17_-_43568118 AK299116 BC053848 AB002354 BC064361	62486	-	AK125535|ARHGAP27|201176|Rho GTPase activating protein 27##NM_199282|ARHGAP27|201176|Rho GTPase activating protein 27##AK092891|ARHGAP27|201176|Rho GTPase activating protein 27##AK300880|ARHGAP27|201176|Rho GTPase activating protein 27##BC035576|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC022296|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK290203|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK313085|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##NM_003954|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK290650|ARHGAP27|201176|Rho GTPase activating protein 27##BC067345|ARHGAP27|201176|Rho GTPase activating protein 27##NM_174919|ARHGAP27|201176|Rho GTPase activating protein 27##AK299116|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC053848|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##AB002354|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC064361|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1	0.553046	CTCF.p2:-14:0.553
chr6_dbb_hap3	2402473	2402578	reg1009943.p1	10.547	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999667	CTCF.p2:1:1.000
chr12	96392552	96392703	reg1011848.p1	10.546	+	BC096096 BC096097 BC096098 BC096099 D16626 AK303544 NM_002108 AK298736 AK297004 TSC_hg19_v1_chr12_-_96390137	-2553	-	AK054617 NM_152435 TSC_hg19_v1_chr12_+_96337118 AK122802 AB075878 AK290828 BC029146	-55525	+	BC030712 BC095479 BC047659 AK097408 NM_182496	-56227	-	CR457068 AB590523 AB209740 J02959 TSC_hg19_v1_chr12_-_96429366 BC032528 J03459 NM_000895 AK308184	36706	-	AK301308 TSC_hg19_v1_chr12_-_96429399 AK310522 AK293630	36788	-	TSC_hg19_v1_chr12_+_96588154 NM_005230 Z36715 AK312694	195499	+	BC096096|HAL|3034|histidine ammonia-lyase##BC096097|HAL|3034|histidine ammonia-lyase##BC096098|HAL|3034|histidine ammonia-lyase##BC096099|HAL|3034|histidine ammonia-lyase##D16626|HAL|3034|histidine ammonia-lyase##AK303544|HAL|3034|histidine ammonia-lyase##NM_002108|HAL|3034|histidine ammonia-lyase##AK298736|HAL|3034|histidine ammonia-lyase##AK297004|HAL|3034|histidine ammonia-lyase##AK054617|AMDHD1|144193|amidohydrolase domain containing 1##NM_152435|AMDHD1|144193|amidohydrolase domain containing 1##AK122802|AMDHD1|144193|amidohydrolase domain containing 1##AB075878|AMDHD1|144193|amidohydrolase domain containing 1##AK290828|AMDHD1|144193|amidohydrolase domain containing 1##BC029146|AMDHD1|144193|amidohydrolase domain containing 1##BC095479|CCDC38|120935|coiled-coil domain containing 38##BC047659|CCDC38|120935|coiled-coil domain containing 38##AK097408|CCDC38|120935|coiled-coil domain containing 38##NM_182496|CCDC38|120935|coiled-coil domain containing 38##CR457068|LTA4H|4048|leukotriene A4 hydrolase##AB209740|LTA4H|4048|leukotriene A4 hydrolase##J02959|LTA4H|4048|leukotriene A4 hydrolase##BC032528|LTA4H|4048|leukotriene A4 hydrolase##J03459|LTA4H|4048|leukotriene A4 hydrolase##NM_000895|LTA4H|4048|leukotriene A4 hydrolase##AK308184|LTA4H|4048|leukotriene A4 hydrolase##AK301308|LTA4H|4048|leukotriene A4 hydrolase##AK293630|LTA4H|4048|leukotriene A4 hydrolase##NM_005230|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##Z36715|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK312694|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)	0.0	
chr20	13527291	13527409	reg1009116.p1	10.546	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	-324927	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	-537709	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-1628793	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	92214	-	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	238191	-	TSC_hg19_v1_chr20_+_13765698 NM_001039375 NM_024120 AK289781 AK091060 AX746757 BC073158 CU687252 BC005984	238403	+	NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_001039375|C20orf7|79133|chromosome 20 open reading frame 7##NM_024120|C20orf7|79133|chromosome 20 open reading frame 7##AK289781|C20orf7|79133|chromosome 20 open reading frame 7##AK091060|C20orf7|79133|chromosome 20 open reading frame 7##BC073158|C20orf7|79133|chromosome 20 open reading frame 7##BC005984|C20orf7|79133|chromosome 20 open reading frame 7	0.766803	CTCF.p2:22:0.767
chr20	30619411	30619540	reg1004132.p2	10.546	+	NM_080625 AK057090 BC030254	-21227	+	AY534245 NM_001011718 TSC_hg19_v1_chr20_+_30555960	-63586	+	TSC_hg19_v1_chr20_-_30539856 NM_030815 AY286301	-79604	-	TSC_hg19_v1_chr20_+_30640055 NM_001172129 NM_001172130 NM_001172131 NM_001172132 NM_001172133 NM_002110 AK289896 AK225819 AK290928 AK298726 AK026432 BC108930 BC108931 BC113854 BC114463 AK314335 BC073748 BC094847 BC014435	20571	+	TSC_hg19_v1_chr20_+_30697308 NM_014742	77894	+	TSC_hg19_v1_chr20_+_30697532 AK126534 AK294980 AK296500 AK302439 BC021107 D87444	78066	+	NM_080625|C20orf160|140706|chromosome 20 open reading frame 160##AK057090|C20orf160|140706|chromosome 20 open reading frame 160##BC030254|C20orf160|140706|chromosome 20 open reading frame 160##AY534245|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_001011718|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_030815|PDRG1|81572|p53 and DNA-damage regulated 1##AY286301|PDRG1|81572|p53 and DNA-damage regulated 1##NM_001172129|HCK|3055|hemopoietic cell kinase##NM_001172130|HCK|3055|hemopoietic cell kinase##NM_001172131|HCK|3055|hemopoietic cell kinase##NM_001172132|HCK|3055|hemopoietic cell kinase##NM_001172133|HCK|3055|hemopoietic cell kinase##NM_002110|HCK|3055|hemopoietic cell kinase##AK289896|HCK|3055|hemopoietic cell kinase##AK225819|HCK|3055|hemopoietic cell kinase##AK290928|HCK|3055|hemopoietic cell kinase##AK298726|HCK|3055|hemopoietic cell kinase##AK026432|HCK|3055|hemopoietic cell kinase##BC108930|HCK|3055|hemopoietic cell kinase##BC108931|HCK|3055|hemopoietic cell kinase##BC113854|HCK|3055|hemopoietic cell kinase##BC114463|HCK|3055|hemopoietic cell kinase##AK314335|HCK|3055|hemopoietic cell kinase##BC073748|HCK|3055|hemopoietic cell kinase##BC094847|HCK|3055|hemopoietic cell kinase##BC014435|HCK|3055|hemopoietic cell kinase##NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4##BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4##D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4	0.995751	CTCF.p2:13:0.996
chr5	141044681	141044825	reg1011840.p1	10.546	+	TSC_hg19_v1_chr5_-_141030986 AY217346 NM_033449	-13770	-	AB527141 TSC_hg19_v1_chr5_-_141030964 AK000007	-13798	-	TSC_hg19_v1_chr5_+_141016987 BC063469 BC009560	-27674	+	AJ310567 TSC_hg19_v1_chr5_-_141061794 AK091385 AX746950 AK290052	17019	-	TSC_hg19_v1_chr5_-_141061801 NM_022481	17064	-	CU690208 TSC_hg19_v1_chr5_-_141257848	213086	-	AY217346|FCHSD1|89848|FCH and double SH3 domains 1##NM_033449|FCHSD1|89848|FCH and double SH3 domains 1##AK000007|FCHSD1|89848|FCH and double SH3 domains 1##BC063469|RELL2|285613|RELT-like 2##BC009560|RELL2|285613|RELT-like 2##AJ310567|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK091385|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK290052|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##NM_022481|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	0.999602	CTCF.p2:-18:1.000
chr16	80500412	80500542	reg1010294.p2	10.545	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-865862	-	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-2367022	+	NM_001244755	-2437492	+	AF125108 NM_130897 BC054892 BC035232	74411	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	337570	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	539607	+	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N	0.994545	CTCF.p2:13:0.995
chr19	10547234	10547350	reg1010749.p2	10.545	+	AF073745 NM_001111309	-4182	+	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	-5865	+	TSC_hg19_v1_chr19_+_10531189 L20965 NM_001111307	-16062	+	TSC_hg19_v1_chr19_+_10563605 BC038234 NM_006202 BC019864	16376	+	TSC_hg19_v1_chr19_-_10613392 BC002930 AF361886 D50922 NM_012289	66146	-	TSC_hg19_v1_chr19_-_10614033 NM_203500	66622	-	AF073745|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111309|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##L20965|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111307|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC038234|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_006202|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC019864|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC002930|KEAP1|9817|kelch-like ECH-associated protein 1##AF361886|KEAP1|9817|kelch-like ECH-associated protein 1##D50922|KEAP1|9817|kelch-like ECH-associated protein 1##NM_012289|KEAP1|9817|kelch-like ECH-associated protein 1##NM_203500|KEAP1|9817|kelch-like ECH-associated protein 1	0.097762	
chr19	3324529	3324632	reg1010054.p2	10.545	+	BC047522 DQ891648 DQ894837 TSC_hg19_v1_chr19_+_3224751 CU690430 AF329266	-99837	+	BC028101 NM_021938 AB209067 NM_001172673 TSC_hg19_v1_chr19_+_3224705	-99876	+	TSC_hg19_v1_chr19_+_3198814 BC008920	-125755	+	TSC_hg19_v1_chr19_+_3359531 NM_001245005 NM_205843 X12492 AK304816 AK289885	34876	+	TSC_hg19_v1_chr19_+_3366562 NM_001245002 NM_001245004 NM_005597 BC012120	41975	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	42000	+	BC047522|CELF5|60680|CUGBP, Elav-like family member 5##DQ891648|CELF5|60680|CUGBP, Elav-like family member 5##DQ894837|CELF5|60680|CUGBP, Elav-like family member 5##AF329266|CELF5|60680|CUGBP, Elav-like family member 5##BC028101|CELF5|60680|CUGBP, Elav-like family member 5##NM_021938|CELF5|60680|CUGBP, Elav-like family member 5##AB209067|CELF5|60680|CUGBP, Elav-like family member 5##NM_001172673|CELF5|60680|CUGBP, Elav-like family member 5##BC008920|NCLN|56926|nicalin##NM_001245005|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_205843|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X12492|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK304816|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK289885|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245002|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245004|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_005597|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC012120|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)	0.995935	CTCF.p2:0:0.996
chr14	95993873	95993977	reg1009631.p1	10.544	+	AK131436 BC146604 BX248076 NM_152592	-51821	-	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	-207742	-	TSC_hg19_v1_chr14_+_95624023 BC040596	-369904	+	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	7090	-	TSC_hg19_v1_chr14_+_96001352 NM_016417	7401	+	TSC_hg19_v1_chr14_+_96001362 BX248075 BC023528 BC047680	7443	+	AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##NM_016417|GLRX5|51218|glutaredoxin 5##BX248075|GLRX5|51218|glutaredoxin 5##BC023528|GLRX5|51218|glutaredoxin 5##BC047680|GLRX5|51218|glutaredoxin 5	0.14212	
chr4	104012900	104013018	reg1008843.p1	10.544	+	NM_178833	-14790	-	TSC_hg19_v1_chr4_-_103997929 AK172823	-15034	-	BC047447 TSC_hg19_v1_chr4_-_103997468 AK299888	-15486	-	AK128463 TSC_hg19_v1_chr4_-_104020987 AF164790 AK023323 AK290160 AK291335 AK300626 BC037277 BC095414 AY358841 BC001953 NM_020139	8041	-	AB527246 AB209996 TSC_hg19_v1_chr4_-_104119535 AK290362 NM_001813 Z15005	106561	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	627941	-	NM_178833|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##AK172823|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##BC047447|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##AK299888|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AB209996|CENPE|1062|centromere protein E, 312kDa##AK290362|CENPE|1062|centromere protein E, 312kDa##NM_001813|CENPE|1062|centromere protein E, 312kDa##Z15005|CENPE|1062|centromere protein E, 312kDa##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3	0.979091	CTCF.p2:21:0.979
chr6	57181406	57181529	reg1010027.p1	10.544	+	TSC_hg19_v1_chr6_-_57087081 AF161486 BC015021 NM_016277 CR749371 AK311123	-94396	-	AB034244 AK313796 NM_183227	-95237	-	AF095192 TSC_hg19_v1_chr6_+_57037453 AL050287 BC125039 AB462960 AM392695 AM393005 CR533496	-144029	+	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	948	+	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	1106212	-	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	5814534	-	AF161486|RAB23|51715|RAB23, member RAS oncogene family##BC015021|RAB23|51715|RAB23, member RAS oncogene family##NM_016277|RAB23|51715|RAB23, member RAS oncogene family##CR749371|RAB23|51715|RAB23, member RAS oncogene family##AK311123|RAB23|51715|RAB23, member RAS oncogene family##AB034244|RAB23|51715|RAB23, member RAS oncogene family##AK313796|RAB23|51715|RAB23, member RAS oncogene family##NM_183227|RAB23|51715|RAB23, member RAS oncogene family##AF095192|BAG2|9532|BCL2-associated athanogene 2##AL050287|BAG2|9532|BCL2-associated athanogene 2##BC125039|BAG2|9532|BCL2-associated athanogene 2##AM392695|BAG2|9532|BCL2-associated athanogene 2##AM393005|BAG2|9532|BCL2-associated athanogene 2##CR533496|BAG2|9532|BCL2-associated athanogene 2##BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2	0.051328	
chr10	46230453	46230558	reg1009462.p2	10.543	+	NM_001169106 NM_001169107 NM_015262 TSC_hg19_v1_chr10_+_46222703 AK291430 AB011164 BC150611 AK303048 AK293929 BC053887	-7798	+	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	-62291	-	TSC_hg19_v1_chr10_-_46090318 BC066988 NM_001002265 NM_145021	-140211	-	BC171820 BC171833 AF411132 NM_133446	112408	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	389491	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	410183	-	NM_001169106|FAM21C|253725|family with sequence similarity 21, member C##NM_001169107|FAM21C|253725|family with sequence similarity 21, member C##NM_015262|FAM21C|253725|family with sequence similarity 21, member C##AK291430|FAM21C|253725|family with sequence similarity 21, member C##AB011164|FAM21C|253725|family with sequence similarity 21, member C##BC150611|FAM21C|253725|family with sequence similarity 21, member C##AK303048|FAM21C|253725|family with sequence similarity 21, member C##AK293929|FAM21C|253725|family with sequence similarity 21, member C##BC053887|FAM21C|253725|family with sequence similarity 21, member C##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4##BC066988|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002265|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_145021|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC171833|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##AF411132|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##NM_133446|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	0.968293	CTCF.p2:1:0.968
chr1	147727260	147727385	reg1012485.p1	10.543	+	AL832622 TSC_hg19_v1_chr1_-_147624600	-102722	-	TSC_hg19_v1_chr1_-_147624593 BC136292 NM_183372	-102806	-	BX648497 TSC_hg19_v1_chr1_-_147624379	-102977	-	BC099898 BC071624 AK097058 AK310056 TSC_hg19_v1_chr1_-_147931936 AK310186 AK309393	204606	-	BC130376 BC130378 AB084917 NM_001143883 NM_178230	228075	-	AL117237 NM_015383 BC094705	298532	-	AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##BX648497|NBPF11|200030|neuroblastoma breakpoint family, member 11##BC071624|FLJ39739|388685|uncharacterized FLJ39739##AK097058|FLJ39739|388685|uncharacterized FLJ39739##AK310056|FLJ39739|388685|uncharacterized FLJ39739##AK310186|FLJ39739|388685|uncharacterized FLJ39739##AK309393|FLJ39739|388685|uncharacterized FLJ39739##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##AL117237|NBPF14|25832|neuroblastoma breakpoint family, member 14##NM_015383|NBPF14|25832|neuroblastoma breakpoint family, member 14##BC094705|NBPF1|55672|neuroblastoma breakpoint family, member 1	0.751701	CTCF.p2:2:0.752
chr17	32078280	32078381	reg1010251.p1	10.543	+	AL834182 NM_183377	-458325	-	AF216311 NM_173847 BC100886 BC100887	-759428	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-823127	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	405357	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	504001	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	518943	+	AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7	0.996289	CTCF.p2:3:0.996
chr4	129112595	129112718	reg1011262.p1	10.543	+	AL832170 NM_018078 NM_032239 NM_178043 TSC_hg19_v1_chr4_+_128982502	-130154	+	TSC_hg19_v1_chr4_+_128982483 BC002840 BC018794 BC110300	-130170	+	TSC_hg19_v1_chr4_+_128982466 AK310421 AK092764 AX747714	-130214	+	TSC_hg19_v1_chr4_-_129208960 DQ893193 DQ893194 DQ893694 DQ896520 DQ896521 DQ896522 DQ896866 AJ002030 AX775755	96288	-	AK091741 AX747155 TSC_hg19_v1_chr4_-_129208964 BC016692	96308	-	TSC_hg19_v1_chr4_-_129208969 BC092478	96335	-	AL832170|LARP1B|55132|La ribonucleoprotein domain family, member 1B##NM_018078|LARP1B|55132|La ribonucleoprotein domain family, member 1B##NM_032239|LARP1B|55132|La ribonucleoprotein domain family, member 1B##NM_178043|LARP1B|55132|La ribonucleoprotein domain family, member 1B##BC002840|LARP1B|55132|La ribonucleoprotein domain family, member 1B##BC018794|LARP1B|55132|La ribonucleoprotein domain family, member 1B##BC110300|LARP1B|55132|La ribonucleoprotein domain family, member 1B##AK310421|LARP1B|55132|La ribonucleoprotein domain family, member 1B##AK092764|LARP1B|55132|La ribonucleoprotein domain family, member 1B##DQ893193|PGRMC2|10424|progesterone receptor membrane component 2##DQ893194|PGRMC2|10424|progesterone receptor membrane component 2##DQ893694|PGRMC2|10424|progesterone receptor membrane component 2##DQ896520|PGRMC2|10424|progesterone receptor membrane component 2##DQ896521|PGRMC2|10424|progesterone receptor membrane component 2##DQ896522|PGRMC2|10424|progesterone receptor membrane component 2##DQ896866|PGRMC2|10424|progesterone receptor membrane component 2##AJ002030|PGRMC2|10424|progesterone receptor membrane component 2##AK091741|PGRMC2|10424|progesterone receptor membrane component 2##BC016692|PGRMC2|10424|progesterone receptor membrane component 2##BC092478|PGRMC2|10424|progesterone receptor membrane component 2	0.649717	CTCF.p2:-20:0.613
chr6	38965030	38965167	reg1011832.p1	10.543	+	AF527621 NM_001206927	-281982	+	TSC_hg19_v1_chr6_-_38670922 NM_006708	-294161	-	AK312662 TSC_hg19_v1_chr6_-_38670921	-294178	-	BC112126 BC113493 NM_002062 TSC_hg19_v1_chr6_+_39016556 U01104 L23503 AB463688 U01156 U01157	51488	+	AF086405 TSC_hg19_v1_chr6_-_39072506	107361	-	TSC_hg19_v1_chr6_-_39082938 CR627244 AK001963 NM_018322 EU832483 EU832563 BC022007	117748	-	AF527621|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_001206927|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_006708|GLO1|2739|glyoxalase I##AK312662|GLO1|2739|glyoxalase I##BC112126|GLP1R|2740|glucagon-like peptide 1 receptor##BC113493|GLP1R|2740|glucagon-like peptide 1 receptor##NM_002062|GLP1R|2740|glucagon-like peptide 1 receptor##U01104|GLP1R|2740|glucagon-like peptide 1 receptor##L23503|GLP1R|2740|glucagon-like peptide 1 receptor##U01156|GLP1R|2740|glucagon-like peptide 1 receptor##U01157|GLP1R|2740|glucagon-like peptide 1 receptor##AF086405|C6orf64|55776|chromosome 6 open reading frame 64##CR627244|C6orf64|55776|chromosome 6 open reading frame 64##AK001963|C6orf64|55776|chromosome 6 open reading frame 64##NM_018322|C6orf64|55776|chromosome 6 open reading frame 64##EU832483|C6orf64|55776|chromosome 6 open reading frame 64##EU832563|C6orf64|55776|chromosome 6 open reading frame 64##BC022007|C6orf64|55776|chromosome 6 open reading frame 64	0.221829	CTCF.p2:-7:0.222
chr14	65881846	65881996	reg1012028.p1	10.542	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-2196	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-2433	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-2595	-	AB037806 AF272663 NM_001024218 NM_020806	1092203	+	TSC_hg19_v1_chr14_+_66974859 AK025169	1092932	+	TSC_hg19_v1_chr14_+_66974870 AK315569	1092948	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.145533	
chr19	12868491	12868601	reg1009678.p1	10.542	+	AF440756 AY515705 NM_017682 AK000139 AK225232	-5108	+	TSC_hg19_v1_chr19_+_12848310 NM_004317 AK223363 AK291855 AK293588 AF047469 BC002651 CU678092 U60276	-20222	+	TSC_hg19_v1_chr19_-_12845557 BC040846	-22998	-	CU680326 DQ891339 DQ893360 DQ894521 DQ896679 AB527820 TSC_hg19_v1_chr19_-_12886342 AF044924 BC012443	17781	-	TSC_hg19_v1_chr19_-_12886422 NM_001100176 NM_013312	17881	-	TSC_hg19_v1_chr19_+_12902286 DQ650707	33744	+	AF440756|BEST2|54831|bestrophin 2##AY515705|BEST2|54831|bestrophin 2##NM_017682|BEST2|54831|bestrophin 2##AK000139|BEST2|54831|bestrophin 2##AK225232|BEST2|54831|bestrophin 2##NM_004317|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##AK223363|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##AK291855|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##AK293588|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##AF047469|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##BC002651|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##U60276|ASNA1|439|arsA arsenite transporter, ATP-binding, homolog 1 (bacterial)##BC040846|C19orf43|79002|chromosome 19 open reading frame 43##DQ891339|HOOK2|29911|hook homolog 2 (Drosophila)##DQ893360|HOOK2|29911|hook homolog 2 (Drosophila)##DQ894521|HOOK2|29911|hook homolog 2 (Drosophila)##DQ896679|HOOK2|29911|hook homolog 2 (Drosophila)##AF044924|HOOK2|29911|hook homolog 2 (Drosophila)##BC012443|HOOK2|29911|hook homolog 2 (Drosophila)##NM_001100176|HOOK2|29911|hook homolog 2 (Drosophila)##NM_013312|HOOK2|29911|hook homolog 2 (Drosophila)	0.611367	CTCF.p2:7:0.611
chrX	30588764	30588891	reg1009864.p1	10.542	+	HQ692832 AB464646 BC011564 NM_000475	-261341	-	NM_177404 BC013772	-323531	+	AK314977 NM_002363 NM_177415 X82539	-326980	+	TSC_hg19_v1_chrX_-_30595884 AK021639 BC020611 NM_025159	7130	-	TSC_hg19_v1_chrX_+_30671493 BC042421 BC071595 NM_000167 NM_001128127 NM_001205019 NM_203391	82667	+	TSC_hg19_v1_chrX_+_30671539 AK313215	82715	+	HQ692832|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##BC011564|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_000475|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_177404|MAGEB1|4112|melanoma antigen family B, 1##BC013772|MAGEB1|4112|melanoma antigen family B, 1##AK314977|MAGEB1|4112|melanoma antigen family B, 1##NM_002363|MAGEB1|4112|melanoma antigen family B, 1##NM_177415|MAGEB1|4112|melanoma antigen family B, 1##X82539|MAGEB1|4112|melanoma antigen family B, 1##AK021639|CXorf21|80231|chromosome X open reading frame 21##BC020611|CXorf21|80231|chromosome X open reading frame 21##NM_025159|CXorf21|80231|chromosome X open reading frame 21##BC042421|GK|2710|glycerol kinase##BC071595|GK|2710|glycerol kinase##NM_000167|GK|2710|glycerol kinase##NM_001128127|GK|2710|glycerol kinase##NM_001205019|GK|2710|glycerol kinase##NM_203391|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase	0.960061	CTCF.p2:-1:0.960
chr18	40176286	40176410	reg1012903.p1	10.540	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-641115	+	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	-641149	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-2796080	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	519221	-	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	681081	-	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	2083766	+	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK090603|LOC647946|647946|uncharacterized LOC647946##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1	0.948553	CTCF.p2:6:0.949
chr3	159647308	159647424	reg1007600.p1	10.540	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	-89507	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	-89673	+	TSC_hg19_v1_chr3_+_159481881 AK309223	-165404	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	59366	+	TSC_hg19_v1_chr3_+_159943306 NM_001168214	295971	+	BC031660 TSC_hg19_v1_chr3_+_159943777	296337	+	BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##AK309223|SCHIP1|29970|schwannomin interacting protein 1##NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80##BC031660|C3orf80|401097|chromosome 3 open reading frame 80	0.983324	CTCF.p2:-15:0.983
chr5	128241347	128241477	reg1012501.p1	10.540	+	NM_001999 TSC_hg19_v1_chr5_-_127873939 AF193046	-367571	-	TSC_hg19_v1_chr5_-_127873553 AK300440	-367895	-	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	-821939	+	TSC_hg19_v1_chr5_+_128300789 BC041945	59391	+	TSC_hg19_v1_chr5_+_128301169 BX537383 NM_014031 NM_001017372 AK313456 AL833117	59785	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	189013	+	NM_001999|FBN2|2201|fibrillin 2##AF193046|FBN2|2201|fibrillin 2##AK300440|FBN2|2201|fibrillin 2##AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC041945|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##BX537383|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_014031|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_001017372|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AK313456|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AL833117|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1	0.997302	CTCF.p2:-8:0.997
chr17	78840140	78840262	reg1009255.p1	10.539	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-321383	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-321552	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-389874	-	TSC_hg19_v1_chr17_+_78935064 BC073898	94931	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	125440	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	125493	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.965996	CTCF.p2:-10:0.966
chr3	106543767	106543885	reg1012265.p1	10.539	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-956019	-	CR749655 TSC_hg19_v1_chr3_-_105421064	-1122772	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-1458004	+	TSC_hg19_v1_chr3_-_106959482 BC036229	415653	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	415766	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	552484	+	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54	0.903385	CTCF.p2:-7:0.903
chr7	150685681	150685805	reg1010224.p1	10.537	+	TSC_hg19_v1_chr7_-_150675385 DQ525913 NM_000238 NM_172056	-10374	-	TSC_hg19_v1_chr7_-_150652893 BC127672 BC127673 BC080563 NM_001204798 NM_172057 DQ120125	-32816	-	TSC_hg19_v1_chr7_+_150549604 U11863 AK092514 AK296638 AK307278 AK314806 BC014093 M55602	-136131	+	NM_000603 BC063294 AK300390	2424	+	AK292928 AK302686 M93718 AK315213 TSC_hg19_v1_chr7_+_150690869 AK223636 AK225827 M95296 BC069465 HQ257992 AF400594 DQ256129 DQ256130 DQ256131 NM_001160109 NM_001160110 NM_001160111	5121	+	BC128587 AK096734 AY515311 NM_173681	35825	-	DQ525913|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_000238|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172056|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##BC127673|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_001204798|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172057|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##DQ120125|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##U11863|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK092514|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK296638|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK314806|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##BC014093|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##M55602|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##HQ257992|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)	1.835527	CTCF.p2:23:0.961	CTCF.p2:56:0.875
chr11	47429713	47429860	reg1009339.p1	10.536	+	TSC_hg19_v1_chr11_-_47400097 X52056 NM_001080547 NM_003120	-29675	-	TSC_hg19_v1_chr11_-_47400039 AK310065	-29771	-	AB464244 TSC_hg19_v1_chr11_-_47399956	-29844	-	NM_001128225 NM_152264 TSC_hg19_v1_chr11_+_47430053	273	+	TSC_hg19_v1_chr11_+_47430149 BC008853 BC019016	386	+	TSC_hg19_v1_chr11_-_47447457 CR456731	17677	-	X52056|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##NM_001080547|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##NM_003120|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##AK310065|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##NM_001128225|SLC39A13|91252|solute carrier family 39 (zinc transporter), member 13##NM_152264|SLC39A13|91252|solute carrier family 39 (zinc transporter), member 13##BC008853|SLC39A13|91252|solute carrier family 39 (zinc transporter), member 13##BC019016|SLC39A13|91252|solute carrier family 39 (zinc transporter), member 13##CR456731|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3	0.033938	
chr11	85652536	85652676	reg1012106.p1	10.536	+	AK124113 NM_173556	-86463	+	TSC_hg19_v1_chr11_-_85522185 AB046817 NM_032943 AK296224 AK296740	-130425	-	BC136450 BC144114 BC144115 NM_001162951 NM_001162953	-183563	-	AB451308 BC048259 U45976 BC073961 TSC_hg19_v1_chr11_-_85779975	127292	-	TSC_hg19_v1_chr11_-_85780088 BC064357	127489	-	TSC_hg19_v1_chr11_-_85780127 AB210017 NM_001008660 NM_001206946 NM_007166 AK291414	127518	-	AK124113|CCDC83|220047|coiled-coil domain containing 83##NM_173556|CCDC83|220047|coiled-coil domain containing 83##AB046817|SYTL2|54843|synaptotagmin-like 2##NM_032943|SYTL2|54843|synaptotagmin-like 2##AK296224|SYTL2|54843|synaptotagmin-like 2##AK296740|SYTL2|54843|synaptotagmin-like 2##BC136450|SYTL2|54843|synaptotagmin-like 2##BC144114|SYTL2|54843|synaptotagmin-like 2##BC144115|SYTL2|54843|synaptotagmin-like 2##NM_001162951|SYTL2|54843|synaptotagmin-like 2##NM_001162953|SYTL2|54843|synaptotagmin-like 2##AB451308|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC048259|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##U45976|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC073961|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC064357|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AB210017|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001008660|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206946|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_007166|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AK291414|PICALM|8301|phosphatidylinositol binding clathrin assembly protein	0.247954	CTCF.p2:-15:0.248
chr22	31668940	31669060	reg1011588.p1	10.535	+	TSC_hg19_v1_chr22_+_31644372 AK314391 AK293774 AL117466 D85527 BC013051	-24580	+	AK299112 TSC_hg19_v1_chr22_+_31644324 NM_001031801 NM_016733	-24670	+	TSC_hg19_v1_chr22_+_31608285 CR456513 CU013112 CU013400 AB587469 AB451269 AB451396	-60653	+	TSC_hg19_v1_chr22_-_31686709 BC041903 AK093768	17723	-	AB489144 CU013051 CU013339 CR456340 GU135609 AK226089 TSC_hg19_v1_chr22_-_31688475 AK300990 AF528079 AF528080 BC011049 AK074688 AK299397 NM_001135911 NM_052880	19424	-	TSC_hg19_v1_chr22_-_31741603 AL096880 CU013210 CU013498 AB384725 AF242522 CR456613	72625	-	AK314391|LIMK2|3985|LIM domain kinase 2##AK293774|LIMK2|3985|LIM domain kinase 2##AL117466|LIMK2|3985|LIM domain kinase 2##D85527|LIMK2|3985|LIM domain kinase 2##BC013051|LIMK2|3985|LIM domain kinase 2##AK299112|LIMK2|3985|LIM domain kinase 2##NM_001031801|LIMK2|3985|LIM domain kinase 2##NM_016733|LIMK2|3985|LIM domain kinase 2##CR456513|LIMK2|3985|LIM domain kinase 2##CU013112|LIMK2|3985|LIM domain kinase 2##CU013400|LIMK2|3985|LIM domain kinase 2##AB451269|LIMK2|3985|LIM domain kinase 2##AB451396|LIMK2|3985|LIM domain kinase 2##BC041903|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK093768|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##CR456340|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##GU135609|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK226089|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK300990|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AF528079|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AF528080|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##BC011049|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK074688|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK299397|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##NM_001135911|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##NM_052880|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AL096880|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF242522|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##CR456613|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	0.999774	CTCF.p2:10:1.000
chr6_cox_hap2	4494805	4494913	reg1009110.p2	10.534	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.997966	CTCF.p2:-5:0.998
chrX	38025854	38025980	reg1011175.p1	10.534	+	NM_001163334	-133131	+	BX647688 NM_001163335 NM_138780 TSC_hg19_v1_chrX_+_37865853 AK125106	-160067	+	AF049615 NM_012274 BC104428 BC104429 BC113024 BC113025	-175837	+	TSC_hg19_v1_chrX_-_38080117 AB527644 CU676640 U61374 U78093 AK298802 AK289430 BC020684 AK293127 AK125542 NM_001170750 NM_001170751 NM_001170752 NM_006307	54208	-	X97668 CU689206 AJ238395 U57629 TSC_hg19_v1_chrX_-_38186763 BC031624 AK223491 DQ980616	160778	-	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	160878	-	NM_001163334|SYTL5|94122|synaptotagmin-like 5##BX647688|SYTL5|94122|synaptotagmin-like 5##NM_001163335|SYTL5|94122|synaptotagmin-like 5##NM_138780|SYTL5|94122|synaptotagmin-like 5##AK125106|SYTL5|94122|synaptotagmin-like 5##AF049615|CXorf27|25763|chromosome X open reading frame 27##NM_012274|CXorf27|25763|chromosome X open reading frame 27##BC104428|CXorf27|25763|chromosome X open reading frame 27##BC104429|CXorf27|25763|chromosome X open reading frame 27##BC113024|CXorf27|25763|chromosome X open reading frame 27##BC113025|CXorf27|25763|chromosome X open reading frame 27##U61374|SRPX|8406|sushi-repeat containing protein, X-linked##U78093|SRPX|8406|sushi-repeat containing protein, X-linked##AK298802|SRPX|8406|sushi-repeat containing protein, X-linked##AK289430|SRPX|8406|sushi-repeat containing protein, X-linked##BC020684|SRPX|8406|sushi-repeat containing protein, X-linked##AK293127|SRPX|8406|sushi-repeat containing protein, X-linked##AK125542|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked##NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked##X97668|RPGR|6103|retinitis pigmentosa GTPase regulator##AJ238395|RPGR|6103|retinitis pigmentosa GTPase regulator##U57629|RPGR|6103|retinitis pigmentosa GTPase regulator##BC031624|RPGR|6103|retinitis pigmentosa GTPase regulator##AK223491|RPGR|6103|retinitis pigmentosa GTPase regulator##DQ980616|RPGR|6103|retinitis pigmentosa GTPase regulator##DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator	0.999847	CTCF.p2:13:1.000
chr10	113897263	113897384	reg1010808.p1	10.533	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	-1060471	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-1217943	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-1217963	+	AB046780 TSC_hg19_v1_chr10_-_113933602	36238	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	46182	-	BC113497 BC113499 AF312827 HQ258194 NM_058222	146129	+	NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta	0.999586	CTCF.p2:9:1.000
chr10	95576049	95576168	reg1010917.p1	10.533	+	NM_005097 BC022500 AF055636 AF473548 AK309416 AY358885 AK303956	-58462	+	TSC_hg19_v1_chr10_-_95462320 AJ431721 AJ431722 AJ431723 AJ431724 AJ431725 AK090955 AX746703 NM_145246	-113773	-	NM_006204 U31973 BC111377	-203701	+	TSC_hg19_v1_chr10_+_95653753 AK091309 AX746907 NM_001134658 NM_153226 BC036382 BC058549 BC143283 BC143284 BC104814 BC047102	77632	+	TSC_hg19_v1_chr10_+_95753696 AB040949 BC151854 NM_016341	177606	+	AK297779 AK289852 NM_001165979 AF170071	272723	+	NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1##BC022500|LGI1|9211|leucine-rich, glioma inactivated 1##AF055636|LGI1|9211|leucine-rich, glioma inactivated 1##AF473548|LGI1|9211|leucine-rich, glioma inactivated 1##AK309416|LGI1|9211|leucine-rich, glioma inactivated 1##AY358885|LGI1|9211|leucine-rich, glioma inactivated 1##AK303956|LGI1|9211|leucine-rich, glioma inactivated 1##AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_006204|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##U31973|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##BC111377|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##AK091309|SLC35G1|159371|solute carrier family 35, member G1##NM_001134658|SLC35G1|159371|solute carrier family 35, member G1##NM_153226|SLC35G1|159371|solute carrier family 35, member G1##BC036382|SLC35G1|159371|solute carrier family 35, member G1##BC143284|SLC35G1|159371|solute carrier family 35, member G1##BC104814|SLC35G1|159371|solute carrier family 35, member G1##BC047102|SLC35G1|159371|solute carrier family 35, member G1##AB040949|PLCE1|51196|phospholipase C, epsilon 1##BC151854|PLCE1|51196|phospholipase C, epsilon 1##NM_016341|PLCE1|51196|phospholipase C, epsilon 1##AK297779|PLCE1|51196|phospholipase C, epsilon 1##AK289852|PLCE1|51196|phospholipase C, epsilon 1##NM_001165979|PLCE1|51196|phospholipase C, epsilon 1##AF170071|PLCE1|51196|phospholipase C, epsilon 1	0.98411	CTCF.p2:-4:0.974
chr11	6384433	6384545	reg1009445.p2	10.533	+	DQ892300 DQ895499 BC038387 TSC_hg19_v1_chr11_-_6341732 BC011585 NM_145040 AF339881	-42756	-	NM_176875 D13305 S70057 L07746 AK292064 AK226020 BC000740 AK314266 AB527993 AF239668 Y13464 DQ890577 DQ893737 AF441129 AY029770 AY322551 BT006789 L04473 L08112	-103459	+	NM_001037329 AK122736	-124164	+	TSC_hg19_v1_chr11_+_6411681 NM_000543 NM_001007593 AB209775 AK292388 X59960 BC041164 M59916 AY649987 HQ132745 HQ132746 HQ132747 HQ132748	27243	+	TSC_hg19_v1_chr11_-_6440299 AK293452 AF394214 L77864 NM_001164 AK293613 AK294495 AK311725	55834	-	AK297544 BC010854 NM_145689 TSC_hg19_v1_chr11_-_6440647	56151	-	DQ892300|PRKCDBP|112464|protein kinase C, delta binding protein##DQ895499|PRKCDBP|112464|protein kinase C, delta binding protein##BC038387|PRKCDBP|112464|protein kinase C, delta binding protein##BC011585|PRKCDBP|112464|protein kinase C, delta binding protein##NM_145040|PRKCDBP|112464|protein kinase C, delta binding protein##AF339881|PRKCDBP|112464|protein kinase C, delta binding protein##NM_176875|CCKBR|887|cholecystokinin B receptor##D13305|CCKBR|887|cholecystokinin B receptor##S70057|CCKBR|887|cholecystokinin B receptor##L07746|CCKBR|887|cholecystokinin B receptor##AK292064|CCKBR|887|cholecystokinin B receptor##AK226020|CCKBR|887|cholecystokinin B receptor##BC000740|CCKBR|887|cholecystokinin B receptor##AK314266|CCKBR|887|cholecystokinin B receptor##AF239668|CCKBR|887|cholecystokinin B receptor##DQ890577|CCKBR|887|cholecystokinin B receptor##DQ893737|CCKBR|887|cholecystokinin B receptor##AF441129|CCKBR|887|cholecystokinin B receptor##AY029770|CCKBR|887|cholecystokinin B receptor##AY322551|CCKBR|887|cholecystokinin B receptor##BT006789|CCKBR|887|cholecystokinin B receptor##L04473|CCKBR|887|cholecystokinin B receptor##L08112|CCKBR|887|cholecystokinin B receptor##NM_001037329|CNGA4|1262|cyclic nucleotide gated channel alpha 4##AK122736|CNGA4|1262|cyclic nucleotide gated channel alpha 4##NM_000543|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##NM_001007593|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AB209775|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK292388|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##X59960|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##BC041164|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##M59916|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AY649987|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132745|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132746|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132747|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132748|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK293452|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AF394214|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##L77864|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_001164|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK293613|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK294495|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK311725|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK297544|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##BC010854|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_145689|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)	0.999718	CTCF.p2:0:1.000
chr17	25680907	25681074	reg1009721.p1	10.532	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-59709	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-59868	+	NM_001190452	-3658554	+	BC035488 BC042106 NM_014238	118039	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	277178	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	277213	+	AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.997762	CTCF.p2:-15:0.998
chr17	28452404	28452546	reg1012962.p1	10.532	+	TSC_hg19_v1_chr17_+_28443846 AK297102 AL136806 NM_032141 AK094552 BC062425 AK313963 BC105044 BC105046 BC143417 BC143539 BC046116 BC040118 AF161358 BC016313 AB462988 AM392705 AM392719 CR533555	-8634	+	NM_198529 BX648689 BC137519	-183771	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	-195342	-	NM_001045	110478	-	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	166484	-	NM_000386 TSC_hg19_v1_chr17_-_28619220	166728	-	AK297102|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AL136806|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_032141|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK094552|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC062425|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK313963|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105044|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105046|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143417|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143539|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC046116|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC040118|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AF161358|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC016313|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392705|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392719|NSRP1|84081|nuclear speckle splicing regulatory protein 1##CR533555|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_001045|SLC6A4|6532|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase##NM_000386|BLMH|642|bleomycin hydrolase	0.968753	CTCF.p2:-9:0.969
chr19	49977354	49977478	reg1008509.p2	10.532	+	AK297101 TSC_hg19_v1_chr19_+_49956529 BC014895 AK024182 AK301246	-20886	+	NM_001145396 NM_153329 TSC_hg19_v1_chr19_+_49956479 AK298587 AK074136	-20935	+	TSC_hg19_v1_chr19_-_49955072 AK294687 BC001108 AK000650 AK304476 NM_017916	-22347	-	NM_001204502 NM_001459 TSC_hg19_v1_chr19_+_49977483 U04806 BC006331 BC011914 BC028001 BC126293 BC136464 BC144129	82	+	NM_001204503 U03858 AK301136 TSC_hg19_v1_chr19_+_49977846 HQ258599	440	+	TSC_hg19_v1_chr19_+_49990861 AK130605	13440	+	AK297101|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##BC014895|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK024182|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK301246|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##NM_001145396|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##NM_153329|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK298587|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK074136|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK294687|PIH1D1|55011|PIH1 domain containing 1##BC001108|PIH1D1|55011|PIH1 domain containing 1##AK000650|PIH1D1|55011|PIH1 domain containing 1##AK304476|PIH1D1|55011|PIH1 domain containing 1##NM_017916|PIH1D1|55011|PIH1 domain containing 1##NM_001204502|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##NM_001459|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##U04806|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC006331|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC011914|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC028001|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC126293|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC136464|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC144129|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##NM_001204503|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##U03858|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##AK301136|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##HQ258599|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##AK130605|RPL13A|23521|ribosomal protein L13a	0.997188	CTCF.p2:-2:0.997
chr3	118993893	118994050	reg1009659.p1	10.532	+	TSC_hg19_v1_chr3_-_118959726 AK001006 AK301688 AK314425 BX647468 CR749555 NM_003778 NM_212543	-34234	-	AK303924 AK313787 NM_006952 AB002155	-101557	+	AK057421 NM_152539 BC130475 BC144197	-128975	+	TSC_hg19_v1_chr3_+_119013229 AB033030 NM_020754	19260	+	TSC_hg19_v1_chr3_+_119013513 AK293726 BC112163 BC112165 AB384581 HQ258543	19649	+	TSC_hg19_v1_chr3_-_119182462 BC003192 BC010070 BC021277 AK222950 AK223248 AK001764 NM_018266	188498	-	AK001006|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK301688|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK314425|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BX647468|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##CR749555|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_003778|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_212543|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK303924|UPK1B|7348|uroplakin 1B##AK313787|UPK1B|7348|uroplakin 1B##NM_006952|UPK1B|7348|uroplakin 1B##AB002155|UPK1B|7348|uroplakin 1B##AK057421|C3orf30|152405|chromosome 3 open reading frame 30##NM_152539|C3orf30|152405|chromosome 3 open reading frame 30##BC130475|C3orf30|152405|chromosome 3 open reading frame 30##BC144197|C3orf30|152405|chromosome 3 open reading frame 30##AB033030|ARHGAP31|57514|Rho GTPase activating protein 31##NM_020754|ARHGAP31|57514|Rho GTPase activating protein 31##AK293726|ARHGAP31|57514|Rho GTPase activating protein 31##BC112163|ARHGAP31|57514|Rho GTPase activating protein 31##BC112165|ARHGAP31|57514|Rho GTPase activating protein 31##HQ258543|ARHGAP31|57514|Rho GTPase activating protein 31##BC003192|TMEM39A|55254|transmembrane protein 39A##BC010070|TMEM39A|55254|transmembrane protein 39A##BC021277|TMEM39A|55254|transmembrane protein 39A##AK222950|TMEM39A|55254|transmembrane protein 39A##AK223248|TMEM39A|55254|transmembrane protein 39A##AK001764|TMEM39A|55254|transmembrane protein 39A##NM_018266|TMEM39A|55254|transmembrane protein 39A	0.968337	CTCF.p2:-4:0.968
chr12	100948420	100948585	reg1010941.p1	10.531	+	AF478445 AF478446 NM_001206992 NM_001206993 AK296612 BX571749 AB463943 BC071778 AK296647	-51333	+	TSC_hg19_v1_chr12_+_100867741 BC035654	-80757	+	AK312959 NM_001206977 NM_001206978 NM_001206979 NM_005123 TSC_hg19_v1_chr12_+_100867643 U68233 BC130573 BC144183 BC144184 BC144187	-80881	+	TSC_hg19_v1_chr12_+_100967438 AK315189	18929	+	TSC_hg19_v1_chr12_+_100967484 BC043366 NM_174942	18987	+	NM_178826 TSC_hg19_v1_chr12_+_101188522 AK091591 AX747079 AK316105 AK293810	240052	+	AF478445|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AF478446|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206992|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206993|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AK296612|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BX571749|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC071778|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AK296647|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC035654|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AK312959|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206977|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206978|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206979|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_005123|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##U68233|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC130573|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC144183|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC144184|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC144187|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AK315189|GAS2L3|283431|growth arrest-specific 2 like 3##BC043366|GAS2L3|283431|growth arrest-specific 2 like 3##NM_174942|GAS2L3|283431|growth arrest-specific 2 like 3##NM_178826|ANO4|121601|anoctamin 4##AK091591|ANO4|121601|anoctamin 4##AK316105|ANO4|121601|anoctamin 4##AK293810|ANO4|121601|anoctamin 4	0.645606	CTCF.p2:-21:0.617
chr18	10851874	10852017	reg1010343.p1	10.530	+	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-325848	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-325889	+	TSC_hg19_v1_chr18_+_10526033 AK294038 U78107 AK314495	-325917	+	NM_022068	296815	-	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	837267	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	899570	+	CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK294038|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##U78107|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK314495|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.736368	CTCF.p2:-12:0.736
chr19	1057331	1057427	reg1009337.p1	10.530	+	AK310127 TSC_hg19_v1_chr19_+_1040114 AK301108 AK310909	-17245	+	TSC_hg19_v1_chr19_+_1040105 NM_019112	-17287	+	AK024835 AK057960 AK293171 TSC_hg19_v1_chr19_+_1026627 BC141818 BC141833 D83735 AK222924 AK300788 D86059 BC148264 CR541810 CR541831 AY927510 AY927514	-30717	+	TSC_hg19_v1_chr19_+_1067170 BC065223 NM_012292	9764	+	AK304271 TSC_hg19_v1_chr19_+_1067315 AK304765 D86976	9947	+	TSC_hg19_v1_chr19_+_1067558 BC035564	10193	+	AK310127|ABCA7|10347|ATP-binding cassette, sub-family A (ABC1), member 7##AK301108|ABCA7|10347|ATP-binding cassette, sub-family A (ABC1), member 7##AK310909|ABCA7|10347|ATP-binding cassette, sub-family A (ABC1), member 7##NM_019112|ABCA7|10347|ATP-binding cassette, sub-family A (ABC1), member 7##AK024835|CNN2|1265|calponin 2##AK057960|CNN2|1265|calponin 2##AK293171|CNN2|1265|calponin 2##BC141818|CNN2|1265|calponin 2##BC141833|CNN2|1265|calponin 2##D83735|CNN2|1265|calponin 2##AK222924|CNN2|1265|calponin 2##AK300788|CNN2|1265|calponin 2##D86059|CNN2|1265|calponin 2##BC148264|CNN2|1265|calponin 2##CR541810|CNN2|1265|calponin 2##CR541831|CNN2|1265|calponin 2##AY927514|CNN2|1265|calponin 2##BC065223|HMHA1|23526|histocompatibility (minor) HA-1##NM_012292|HMHA1|23526|histocompatibility (minor) HA-1##AK304271|HMHA1|23526|histocompatibility (minor) HA-1##AK304765|HMHA1|23526|histocompatibility (minor) HA-1##D86976|HMHA1|23526|histocompatibility (minor) HA-1##BC035564|HMHA1|23526|histocompatibility (minor) HA-1	0.507997	CTCF.p2:-10:0.508
chr22	50324677	50324823	reg1010360.p1	10.530	+	TSC_hg19_v1_chr22_+_50312337 BC050675 DQ470678 AK225930 AY358355 BC002894 DQ470676 DQ470677 DQ470680 AJ968414	-12375	+	TSC_hg19_v1_chr22_+_50312328 DQ470679 NM_001135101 NM_024324 AK308692 AK308535	-12446	+	TSC_hg19_v1_chr22_-_50312107 NM_024105	-12643	-	TSC_hg19_v1_chr22_+_50354140 NM_001001852 AB114795	29399	+	TSC_hg19_v1_chr22_+_50354433 AK292005 BC141855 BC052239 AB528933 BC140030	29761	+	NM_001001694 AK123987	126320	-	BC050675|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470678|CRELD2|79174|cysteine-rich with EGF-like domains 2##AK225930|CRELD2|79174|cysteine-rich with EGF-like domains 2##AY358355|CRELD2|79174|cysteine-rich with EGF-like domains 2##BC002894|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470676|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470677|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470680|CRELD2|79174|cysteine-rich with EGF-like domains 2##AJ968414|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470679|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_001135101|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_024324|CRELD2|79174|cysteine-rich with EGF-like domains 2##AK308535|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_024105|ALG12|79087|asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae)##NM_001001852|PIM3|415116|pim-3 oncogene##AB114795|PIM3|415116|pim-3 oncogene##AK292005|PIM3|415116|pim-3 oncogene##BC141855|PIM3|415116|pim-3 oncogene##BC052239|PIM3|415116|pim-3 oncogene##BC140030|PIM3|415116|pim-3 oncogene##NM_001001694|IL17REL|400935|interleukin 17 receptor E-like##AK123987|IL17REL|400935|interleukin 17 receptor E-like	0.0	
chr14	107238940	107239095	reg1008568.p2	10.528	+	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	-20019	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	-27716	-	JF810265 DQ454799 FJ840007 FJ840015 DQ454561 DQ454955 DQ454612 DQ454663 DQ454685 FJ840092 FJ840295 FJ873837 AJ008218 JF810272 JF810273 AY003862 AJ132562 Y08732 AF103327 EU099062 EU620029 GQ504979 HQ392897 AF103116 AF103087 AF103100 HM774925 JN110942 HM774229 FJ385350 GQ504960 HM774112 HM774402 HM774448 HM774462 HM774524 HM774766 HM775010 AF103135 HM774927 HM774932 HM774189 U00529 Y14940 AF103057 AF103351 EU146338 L03141 L03153 AF029328 AF485459 DQ431489 L03143 L03173 L03177 AF035801 AY423195 AY423198 AY423206 DQ431488 DQ431492 HM995020 DQ431490 GU570297 HM152513 HM994969 HM994972 HM994977 HM994978 HM994981 HM994982 HM994989 HM995522 HM995532 HM996141 HM996526 DQ187603 DQ187629 DQ322887 DQ322888 DQ322889 DQ322890 DQ322960 DQ840663 DQ840674 DQ840675 DQ840677 DQ840678 DQ840680 DQ840681 DQ840682 DQ840683 DQ840687 DQ840758 DQ840769 DQ840770 DQ840771 DQ840773 DQ840781 DQ840844 DQ840857 DQ840859 DQ840860 DQ840863 DQ840910 DQ840917 DQ840918 AF021973 AF048774 AF115122 AF151702 AF174111 AJ238039 AJ579199 AJ579279 AY866726 AY866767 DQ100754 DQ100773 DQ100787 DQ100849 DQ100977 DQ840729 DQ926055 DQ926218 DQ926255 DQ926308 EF177956 EF178021 GQ267831 U96395 X99352 Y17142 AB063699 AB063849 AB063916 AB067258 AB363156 AF021945 AF129753 AF471200 AF471528 AF471540 AF471541 AF471542 AF471546 AJ300788 AJ389185 AJ556647 AJ556667 AJ579161 AY554174 AY554177 AY554178 AY573190 AY640527 AY640562 AY846273 AY971106 D83679 DQ065693 DQ535269 DQ535318 DQ535335 DQ535453 DQ535464 DQ535482 DQ926153 DQ926492 EF178117 EF178127 EF178131 EU835555 FJ195515 FJ492899 FN563769 GU570345 GU570350 HQ378386 JF806284 U97244 X99353 L33033 Z11950 BC033178 TSC_hg19_v1_chr14_-_107199472	-39717	-	DQ205161 AY392971 AF085654 X58399 X58398 BC002792 TSC_hg19_v1_chr14_-_107259820	20703	-	None	None	None	None	None	None	Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC033178|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##X58399|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##X58398|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##BC002792|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)	4.055018	CTCF.p2:0:0.998	CTCF.p2:19:0.539	CTCF.p2:-38:0.543	CTCF.p2:-58:0.443	CTCF.p2:-77:0.498
chr15	68126273	68126389	reg1009620.p1	10.528	+	NM_001031807	-8391	+	AK293459 NM_001206804	-284990	+	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	-291309	+	AF167160 NM_016166 BC118587 BC121797 TSC_hg19_v1_chr15_+_68346652 AK314515 BC104646	220281	+	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	220330	+	TSC_hg19_v1_chr15_-_68497633 BX640702 BC009516 AK092628 AK296804 AX747637	371306	-	NM_001031807|SKOR1|390598|SKI family transcriptional corepressor 1##AK293459|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_001206804|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5##AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1##NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1##BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1##BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1##AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1##BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1##BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1##BX640702|CALML4|91860|calmodulin-like 4##BC009516|CALML4|91860|calmodulin-like 4##AK092628|CALML4|91860|calmodulin-like 4##AK296804|CALML4|91860|calmodulin-like 4	0.221947	CTCF.p2:10:0.222
chr16	33020968	33021077	reg1010567.p2	10.528	+	AK300387 TSC_hg19_v1_chr16_+_32752635	-268386	+	AL133588 NM_016212	-332970	-	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	-333589	-	AL133588 NM_016212	183957	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	184576	+	AL133588 NM_016212	240492	+	AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3	0.99964	CTCF.p2:-10:1.000
chr14	60662053	60662177	reg1009502.p1	10.527	+	TSC_hg19_v1_chr14_-_60632103 BC007337 AF151844 AK313285 AL117420 NM_016029	-29981	-	AY359031 TSC_hg19_v1_chr14_-_60632031 BC000637	-30083	-	NM_022495 TSC_hg19_v1_chr14_+_60558640 AK095489	-103288	+	AK097843 NM_177952 AK313337	50356	+	TSC_hg19_v1_chr14_+_60715965 NM_021003 NM_177951	53843	+	TSC_hg19_v1_chr14_+_60715993 S87759 BC026691 AF070670 BC063243 AK308225	53996	+	BC007337|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AF151844|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AK313285|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AL117420|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_016029|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AY359031|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC000637|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_022495|C14orf135|64430|chromosome 14 open reading frame 135##AK095489|C14orf135|64430|chromosome 14 open reading frame 135##AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_021003|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_177951|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##S87759|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC026691|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AF070670|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC063243|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AK308225|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	0.054918	
chr12	7245154	7245273	reg1009027.p2	10.526	+	TSC_hg19_v1_chr12_-_7245057 AK291313	-154	-	TSC_hg19_v1_chr12_-_7245038 M14058 X04701 AK024951 AK222481 AK222491 AK303750 BC035220 NM_001733	-189	-	BC007010 TSC_hg19_v1_chr12_+_7169195	-76015	+	BC128428 AF178985 TSC_hg19_v1_chr12_-_7261802 AK222802 BC062428 AK314299 AK024084 NM_016546	16615	-	DQ892613 DQ895853 AY007436 AF212239 NM_031491 AK311977 AK096947 AK223378 BC029355	36217	-	TSC_hg19_v1_chr12_+_7282990 AK316059 NM_014718 AJ277460 BC111491 AK299177 BC104767 BC112283 AB527393 BC148258	37911	+	AK291313|C1R|715|complement component 1, r subcomponent##M14058|C1R|715|complement component 1, r subcomponent##X04701|C1R|715|complement component 1, r subcomponent##AK024951|C1R|715|complement component 1, r subcomponent##AK222481|C1R|715|complement component 1, r subcomponent##AK222491|C1R|715|complement component 1, r subcomponent##AK303750|C1R|715|complement component 1, r subcomponent##BC035220|C1R|715|complement component 1, r subcomponent##NM_001733|C1R|715|complement component 1, r subcomponent##AF178985|C1RL|51279|complement component 1, r subcomponent-like##AK222802|C1RL|51279|complement component 1, r subcomponent-like##BC062428|C1RL|51279|complement component 1, r subcomponent-like##AK314299|C1RL|51279|complement component 1, r subcomponent-like##AK024084|C1RL|51279|complement component 1, r subcomponent-like##NM_016546|C1RL|51279|complement component 1, r subcomponent-like##DQ892613|RBP5|83758|retinol binding protein 5, cellular##DQ895853|RBP5|83758|retinol binding protein 5, cellular##AY007436|RBP5|83758|retinol binding protein 5, cellular##AF212239|RBP5|83758|retinol binding protein 5, cellular##NM_031491|RBP5|83758|retinol binding protein 5, cellular##AK311977|RBP5|83758|retinol binding protein 5, cellular##AK096947|RBP5|83758|retinol binding protein 5, cellular##AK223378|RBP5|83758|retinol binding protein 5, cellular##BC029355|RBP5|83758|retinol binding protein 5, cellular##AK316059|CLSTN3|9746|calsyntenin 3##NM_014718|CLSTN3|9746|calsyntenin 3##AJ277460|CLSTN3|9746|calsyntenin 3##BC111491|CLSTN3|9746|calsyntenin 3##AK299177|CLSTN3|9746|calsyntenin 3##BC104767|CLSTN3|9746|calsyntenin 3##BC112283|CLSTN3|9746|calsyntenin 3##BC148258|CLSTN3|9746|calsyntenin 3	0.999777	CTCF.p2:0:1.000
chrX	67416932	67417042	reg1010096.p1	10.526	+	NM_001011645	-628305	+	TSC_hg19_v1_chrX_+_66766350 M20260	-650616	+	TSC_hg19_v1_chrX_+_66763874 NM_000044	-653112	+	TSC_hg19_v1_chrX_-_67653677 BC059393 NM_002547 AK309665 BC140763 AK295769 AJ001189 AK309696	236575	-	NM_001195214 NM_173834	301636	+	TSC_hg19_v1_chrX_+_67718892 AK095555 AK292835 BC012469 AK303992 AM393755	301901	+	NM_001011645|AR|367|androgen receptor##M20260|AR|367|androgen receptor##NM_000044|AR|367|androgen receptor##BC059393|OPHN1|4983|oligophrenin 1##NM_002547|OPHN1|4983|oligophrenin 1##AK309665|OPHN1|4983|oligophrenin 1##BC140763|OPHN1|4983|oligophrenin 1##AK295769|OPHN1|4983|oligophrenin 1##AJ001189|OPHN1|4983|oligophrenin 1##AK309696|OPHN1|4983|oligophrenin 1##NM_001195214|YIPF6|286451|Yip1 domain family, member 6##NM_173834|YIPF6|286451|Yip1 domain family, member 6##AK095555|YIPF6|286451|Yip1 domain family, member 6##AK292835|YIPF6|286451|Yip1 domain family, member 6##BC012469|YIPF6|286451|Yip1 domain family, member 6##AK303992|YIPF6|286451|Yip1 domain family, member 6##AM393755|YIPF6|286451|Yip1 domain family, member 6	0.997691	CTCF.p2:-17:0.998
chr13	99922019	99922144	reg1009676.p1	10.524	+	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-11467	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-68962	+	TSC_hg19_v1_chr13_-_99852951 BC043515 AK097488	-69114	-	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	37617	-	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	231619	+	TSC_hg19_v1_chr13_+_100153777 BC130293	231701	+	AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.289936	CTCF.p2:-4:0.290
chr18	3703774	3703887	reg1010135.p1	10.524	+	TSC_hg19_v1_chr18_+_3594077 AK093095 AX747919 BC137437	-109688	+	NM_173211	-250059	+	TSC_hg19_v1_chr18_+_3451599 NM_170695 NM_173210 AK307230 BC031268	-252199	+	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	141500	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	170454	-	AK294777 AK294717 NM_001242762 NM_001242763	170897	-	AK093095|FLJ35776|649446|uncharacterized LOC649446##BC137437|FLJ35776|649446|uncharacterized LOC649446##NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1##NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1##BC031268|TGIF1|7050|TGFB-induced factor homeobox 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	0.132248	
chr7	30978494	30978602	reg1009673.p1	10.524	+	AK309608 NM_001185060 AK309691 AK309688 NM_001185061 NM_001185062	-17532	+	NM_198098 TSC_hg19_v1_chr7_+_30951467 AK298091 AK298313 AK300995 AK304684 AK312656 AK301351 BC022486 M77829 S73482 U41517 DQ892366 DQ895575 CU692648 AB463415 AB451275 AB451402	-27079	+	TSC_hg19_v1_chr7_+_30811046 AK026027 NM_032222 AF538962 BC043210 BC098569	-167512	+	L01406 L09237 NM_000823 AY557192	25111	+	TSC_hg19_v1_chr7_+_31092073 NM_001118 NM_001199635 NM_001199636 NM_001199637 AK290046 AK226138	113556	+	AK055238 AF248954 NM_022728	401974	-	AK309608|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185060|AQP1|358|aquaporin 1 (Colton blood group)##AK309691|AQP1|358|aquaporin 1 (Colton blood group)##AK309688|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185061|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185062|AQP1|358|aquaporin 1 (Colton blood group)##NM_198098|AQP1|358|aquaporin 1 (Colton blood group)##AK298091|AQP1|358|aquaporin 1 (Colton blood group)##AK298313|AQP1|358|aquaporin 1 (Colton blood group)##AK300995|AQP1|358|aquaporin 1 (Colton blood group)##AK304684|AQP1|358|aquaporin 1 (Colton blood group)##AK312656|AQP1|358|aquaporin 1 (Colton blood group)##AK301351|AQP1|358|aquaporin 1 (Colton blood group)##BC022486|AQP1|358|aquaporin 1 (Colton blood group)##M77829|AQP1|358|aquaporin 1 (Colton blood group)##S73482|AQP1|358|aquaporin 1 (Colton blood group)##U41517|AQP1|358|aquaporin 1 (Colton blood group)##DQ892366|AQP1|358|aquaporin 1 (Colton blood group)##DQ895575|AQP1|358|aquaporin 1 (Colton blood group)##AB451275|AQP1|358|aquaporin 1 (Colton blood group)##AB451402|AQP1|358|aquaporin 1 (Colton blood group)##AK026027|FAM188B|84182|family with sequence similarity 188, member B##NM_032222|FAM188B|84182|family with sequence similarity 188, member B##AF538962|FAM188B|84182|family with sequence similarity 188, member B##BC043210|FAM188B|84182|family with sequence similarity 188, member B##BC098569|FAM188B|84182|family with sequence similarity 188, member B##L01406|GHRHR|2692|growth hormone releasing hormone receptor##L09237|GHRHR|2692|growth hormone releasing hormone receptor##NM_000823|GHRHR|2692|growth hormone releasing hormone receptor##AY557192|GHRHR|2692|growth hormone releasing hormone receptor##NM_001118|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199635|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199636|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199637|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK290046|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK226138|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6	1.105839	CTCF.p2:4:1.000
chr7	33935047	33935162	reg1009633.p1	10.524	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-766023	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-786127	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-832782	-	AK289963 NM_133468 AK096150 BC060868	10038	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	762815	+	DQ287932 NM_015283	1142548	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	0.891231	CTCF.p2:-6:0.891
chr8	19727946	19728055	reg1009501.p2	10.524	+	TSC_hg19_v1_chr8_+_19674972 AK001431 AB590485	-52997	+	TSC_hg19_v1_chr8_+_19674936 NM_018142	-53079	+	AK314625 TSC_hg19_v1_chr8_-_19615422	-112583	-	NM_000237 S78266 TSC_hg19_v1_chr8_+_19796721	68652	+	TSC_hg19_v1_chr8_+_19796763 AK092286 AK290290 AK222464 AK312311 M15856 X54516	68769	+	X14390 TSC_hg19_v1_chr8_+_19796864 BC011353	68865	+	AK001431|INTS10|55174|integrator complex subunit 10##NM_018142|INTS10|55174|integrator complex subunit 10##AK314625|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_000237|LPL|4023|lipoprotein lipase##S78266|LPL|4023|lipoprotein lipase##AK092286|LPL|4023|lipoprotein lipase##AK290290|LPL|4023|lipoprotein lipase##AK222464|LPL|4023|lipoprotein lipase##AK312311|LPL|4023|lipoprotein lipase##M15856|LPL|4023|lipoprotein lipase##X54516|LPL|4023|lipoprotein lipase##X14390|LPL|4023|lipoprotein lipase##BC011353|LPL|4023|lipoprotein lipase	0.998594	CTCF.p2:-5:0.999
chr3	5468152	5468292	reg1008698.p1	10.523	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-238731	+	TSC_hg19_v1_chr3_+_5229430 D86967	-238789	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	-238859	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	1434577	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	1434676	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	3075108	-	DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK124088|LOC100288428|100288428|uncharacterized LOC100288428	0.740695	CTCF.p2:1:0.741
chr19	43100764	43100877	reg1009572.p1	10.522	+	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	-1790	-	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	-68228	-	X16356 TSC_hg19_v1_chr19_-_43031473	-69411	-	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	143781	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	169004	-	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	283005	-	DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1	0.993485	CTCF.p2:-1:0.993
chr3	75343442	75343571	reg1012207.p1	10.522	+	AB384611 BC150608 NM_020872	-773204	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1669468	-	BC051316 BC064501 NM_018029	-2232697	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	140643	-	AK000525 NM_001124759	369977	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	377980	+	BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074	0.809313	CTCF.p2:-23:0.809
chr11	128701169	128701296	reg1011572.p1	10.521	+	TSC_hg19_v1_chr11_+_128564132 AB385119 AY029368 CU674822 DQ892582 DQ896858	-137090	+	TSC_hg19_v1_chr11_+_128563997 X67001 S45205 BC010115 BC001670	-137177	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	-137252	+	BC136360 BC136361 BC074752 NM_000220 U12541 AK314267 AK290797	11146	-	U12544 U12545 AK308032 U12543 U03884 AK308033 BC063109 NM_153764 NM_153765 NM_153766 NM_153767 U12542	35967	-	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	60108	+	AY029368|FLI1|2313|Friend leukemia virus integration 1##DQ892582|FLI1|2313|Friend leukemia virus integration 1##DQ896858|FLI1|2313|Friend leukemia virus integration 1##X67001|FLI1|2313|Friend leukemia virus integration 1##S45205|FLI1|2313|Friend leukemia virus integration 1##BC010115|FLI1|2313|Friend leukemia virus integration 1##BC001670|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1##BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5	0.999935	CTCF.p2:16:1.000
chr16	27651214	27651361	reg1012401.p1	10.521	+	TSC_hg19_v1_chr16_+_27561464 NM_015202 AB011128 BC150276 BC131508	-89823	+	TSC_hg19_v1_chr16_-_27561248 NM_001520 U02619	-90018	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	-90056	-	BC016460 NM_144675	248190	-	TSC_hg19_v1_chr16_-_28074776 AY358206 NM_001109763	423515	-	AY026388 BC130304 BC144189 TSC_hg19_v1_chr16_-_28222816 AK123846	571498	-	NM_015202|KIAA0556|23247|KIAA0556##AB011128|KIAA0556|23247|KIAA0556##BC150276|KIAA0556|23247|KIAA0556##BC131508|KIAA0556|23247|KIAA0556##NM_001520|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##U02619|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC016460|GSG1L|146395|GSG1-like##NM_144675|GSG1L|146395|GSG1-like##AY358206|GSG1L|146395|GSG1-like##NM_001109763|GSG1L|146395|GSG1-like##AY026388|XPO6|23214|exportin 6##BC130304|XPO6|23214|exportin 6##BC144189|XPO6|23214|exportin 6##AK123846|XPO6|23214|exportin 6	0.773172	CTCF.p2:-11:0.773
chr17	25981824	25981976	reg1010108.p1	10.521	+	TSC_hg19_v1_chr17_+_25958264 AB003517 AB008492	-23628	+	TSC_hg19_v1_chr17_+_25958246 BC105942 BC105944	-23652	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	-23672	+	U31511 TSC_hg19_v1_chr17_-_26127402	145498	-	BC130283 BC144126 U05810 L09210 X73029 AF068236 AK304252 NM_000625 TSC_hg19_v1_chr17_-_26127556	145615	-	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	238491	-	AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC105942|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC105944|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9##U31511|NOS2|4843|nitric oxide synthase 2, inducible##BC130283|NOS2|4843|nitric oxide synthase 2, inducible##BC144126|NOS2|4843|nitric oxide synthase 2, inducible##U05810|NOS2|4843|nitric oxide synthase 2, inducible##L09210|NOS2|4843|nitric oxide synthase 2, inducible##X73029|NOS2|4843|nitric oxide synthase 2, inducible##AF068236|NOS2|4843|nitric oxide synthase 2, inducible##AK304252|NOS2|4843|nitric oxide synthase 2, inducible##NM_000625|NOS2|4843|nitric oxide synthase 2, inducible##AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108	1.884379	CTCF.p2:13:1.000	CTCF.p2:-90:0.885
chr3	106783424	106783541	reg1010561.p1	10.521	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-1195675	-	CR749655 TSC_hg19_v1_chr3_-_105421064	-1362428	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-1697660	+	TSC_hg19_v1_chr3_-_106959482 BC036229	175997	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	176110	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	312828	+	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54	0.875217	CTCF.p2:10:0.875
chr12	45564395	45564500	reg1009968.p2	10.520	+	AK131230 NM_001004329 TSC_hg19_v1_chr12_-_45444883	-119565	-	AK295125 NM_001145110	-256737	-	AK299733 NM_001145107	-293815	-	TSC_hg19_v1_chr12_+_45609769 AK126409 NM_001025356 NM_001142679 NM_001204803 AK310641	45337	+	TSC_hg19_v1_chr12_+_45609845 AK303996	45402	+	TSC_hg19_v1_chr12_+_45609867 AK302819 NM_001142680	45424	+	AK131230|DBX2|440097|developing brain homeobox 2##NM_001004329|DBX2|440097|developing brain homeobox 2##AK295125|NELL2|4753|NEL-like 2 (chicken)##NM_001145110|NELL2|4753|NEL-like 2 (chicken)##AK299733|NELL2|4753|NEL-like 2 (chicken)##NM_001145107|NELL2|4753|NEL-like 2 (chicken)##AK126409|ANO6|196527|anoctamin 6##NM_001025356|ANO6|196527|anoctamin 6##NM_001142679|ANO6|196527|anoctamin 6##NM_001204803|ANO6|196527|anoctamin 6##AK310641|ANO6|196527|anoctamin 6##AK303996|ANO6|196527|anoctamin 6##AK302819|ANO6|196527|anoctamin 6##NM_001142680|ANO6|196527|anoctamin 6	0.999442	CTCF.p2:-12:0.999
chr6	149867386	149867562	reg1010684.p2	10.520	+	BC020986 TSC_hg19_v1_chr6_-_149867195 AK315388 NM_139126	-269	-	TSC_hg19_v1_chr6_-_149867172 AF357880 AK092069 AX747342 BX537536 BC107684	-307	-	TSC_hg19_v1_chr6_-_149867153 CU676802 GQ129364 GQ129365 BC064134	-330	-	TSC_hg19_v1_chr6_+_149887361 AY358952	19901	+	TSC_hg19_v1_chr6_+_149887540 AK295690 BC014320 NM_138785 AK315729 AK289402 AK308844	20037	+	TSC_hg19_v1_chr6_+_149887543 AK311061	20070	+	BC020986|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AK315388|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##NM_139126|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AF357880|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AK092069|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BX537536|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC107684|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##GQ129364|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##GQ129365|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC064134|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AY358952|C6orf72|116254|chromosome 6 open reading frame 72##AK295690|C6orf72|116254|chromosome 6 open reading frame 72##BC014320|C6orf72|116254|chromosome 6 open reading frame 72##NM_138785|C6orf72|116254|chromosome 6 open reading frame 72##AK315729|C6orf72|116254|chromosome 6 open reading frame 72##AK289402|C6orf72|116254|chromosome 6 open reading frame 72##AK308844|C6orf72|116254|chromosome 6 open reading frame 72##AK311061|C6orf72|116254|chromosome 6 open reading frame 72	0.999382	CTCF.p2:24:0.999
chr11	34862423	34862563	reg1012529.p1	10.519	+	AK310867 NM_001206616	-208483	+	TSC_hg19_v1_chr11_+_34642661 AF212848 AF203977 AF170583 AF124438 AF124439	-219827	+	NM_001206615 NM_012153 TSC_hg19_v1_chr11_+_34642639	-219880	+	NM_001135024 NM_001166158 NM_003477	75183	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	75396	-	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	75664	+	AK310867|EHF|26298|ets homologous factor##NM_001206616|EHF|26298|ets homologous factor##AF212848|EHF|26298|ets homologous factor##AF203977|EHF|26298|ets homologous factor##AF170583|EHF|26298|ets homologous factor##AF124438|EHF|26298|ets homologous factor##AF124439|EHF|26298|ets homologous factor##NM_001206615|EHF|26298|ets homologous factor##NM_012153|EHF|26298|ets homologous factor##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X	1.201571	CTCF.p2:23:0.923	CTCF.p2:-105:0.279
chr5	176736808	176736940	reg1012056.p1	10.519	+	TSC_hg19_v1_chr5_+_176730812 BC000007 BC008866 AF087858 BC013733 AF112203 AF111112 AF153607 BC013748 NM_013237 BC008307 AF201925 CU680664 DQ891042 DQ894221 U94779	-5935	+	TSC_hg19_v1_chr5_+_176730807 BC007268 BC018904 AK312170 AF151864	-6079	+	TSC_hg19_v1_chr5_-_176730717 BC010006 AK021761 AK308155 BC021263 BC015534 NM_001031677 NM_130781	-6173	-	CU674382 DQ892734 DQ895981 DQ896213 BC041690 BC000745 BC032586 AF114834 AK222579 AK316468 AK057034 AK303397 TSC_hg19_v1_chr5_-_176738914	2010	-	NM_001142935 NM_031300	2417	-	TSC_hg19_v1_chr5_-_176778650 U10362 AK222609	41765	-	BC000007|PRELID1|27166|PRELI domain containing 1##BC008866|PRELID1|27166|PRELI domain containing 1##AF087858|PRELID1|27166|PRELI domain containing 1##BC013733|PRELID1|27166|PRELI domain containing 1##AF112203|PRELID1|27166|PRELI domain containing 1##AF111112|PRELID1|27166|PRELI domain containing 1##AF153607|PRELID1|27166|PRELI domain containing 1##BC013748|PRELID1|27166|PRELI domain containing 1##NM_013237|PRELID1|27166|PRELI domain containing 1##BC008307|PRELID1|27166|PRELI domain containing 1##AF201925|PRELID1|27166|PRELI domain containing 1##DQ891042|PRELID1|27166|PRELI domain containing 1##DQ894221|PRELID1|27166|PRELI domain containing 1##BC007268|PRELID1|27166|PRELI domain containing 1##BC018904|PRELID1|27166|PRELI domain containing 1##AK312170|PRELID1|27166|PRELI domain containing 1##AF151864|PRELID1|27166|PRELI domain containing 1##BC010006|RAB24|53917|RAB24, member RAS oncogene family##AK021761|RAB24|53917|RAB24, member RAS oncogene family##AK308155|RAB24|53917|RAB24, member RAS oncogene family##BC021263|RAB24|53917|RAB24, member RAS oncogene family##BC015534|RAB24|53917|RAB24, member RAS oncogene family##NM_001031677|RAB24|53917|RAB24, member RAS oncogene family##NM_130781|RAB24|53917|RAB24, member RAS oncogene family##DQ892734|MXD3|83463|MAX dimerization protein 3##DQ895981|MXD3|83463|MAX dimerization protein 3##DQ896213|MXD3|83463|MAX dimerization protein 3##BC041690|MXD3|83463|MAX dimerization protein 3##BC000745|MXD3|83463|MAX dimerization protein 3##BC032586|MXD3|83463|MAX dimerization protein 3##AF114834|MXD3|83463|MAX dimerization protein 3##AK222579|MXD3|83463|MAX dimerization protein 3##AK316468|MXD3|83463|MAX dimerization protein 3##AK057034|MXD3|83463|MAX dimerization protein 3##AK303397|MXD3|83463|MAX dimerization protein 3##NM_001142935|MXD3|83463|MAX dimerization protein 3##NM_031300|MXD3|83463|MAX dimerization protein 3##U10362|LMAN2|10960|lectin, mannose-binding 2##AK222609|LMAN2|10960|lectin, mannose-binding 2	1.916028	CTCF.p2:-3:1.000	CTCF.p2:-96:0.886
chrX	1767603	1767720	reg1010112.p1	10.519	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	-33658	+	NM_004043 U11090	-53314	+	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	-57132	+	BC015030 NM_001171135	650918	-	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	651327	-	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	841651	+	AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015030|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1##BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule	0.999763	CTCF.p2:4:1.000
chr1	207084551	207084693	reg1010871.p1	10.518	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	-13822	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	-45447	+	AF453946 NM_013371	-82401	+	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	10665	-	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	35139	-	AK298394 NM_001122979 NM_001170631 NM_032029	59334	-	NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	0.983769	CTCF.p2:-1:0.984
chr18	61603516	61603638	reg1011223.p1	10.518	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	-20833	+	TSC_hg19_v1_chr18_+_61575223 AK314936	-28363	+	AK313159 BC012609 NM_001143818 NM_002575 Y00630 J02685 J03603 M18082	-48614	+	NM_001123366	13010	+	NM_001031848 NM_002640 NM_198833 AK300391 L40377 TSC_hg19_v1_chr18_+_61637345 BC034528 U92984 BX571754 AK313782	33736	+	AJ007611 NM_033646	1813910	+	BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##AK314936|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##AK313159|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##BC012609|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_001143818|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_002575|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##Y00630|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J02685|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J03603|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##M18082|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing##NM_001031848|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_002640|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_198833|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK300391|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##L40377|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BC034528|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##U92984|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BX571754|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK313782|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2	0.979491	CTCF.p2:-2:0.979
chr13	78815578	78815700	reg1008833.p1	10.517	+	D90402 NM_000115 S57283 AF308156	-265923	-	AF114165 NM_001201397	-321737	-	AF114163 AF114164 TSC_hg19_v1_chr13_-_78493569	-322088	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	354643	+	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	362084	-	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	417654	-	D90402|EDNRB|1910|endothelin receptor type B##NM_000115|EDNRB|1910|endothelin receptor type B##S57283|EDNRB|1910|endothelin receptor type B##AF114165|EDNRB|1910|endothelin receptor type B##NM_001201397|EDNRB|1910|endothelin receptor type B##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219	0.395881	CTCF.p2:-6:0.396
chr16	67706752	67706888	reg1011744.p1	10.517	+	TSC_hg19_v1_chr16_+_67700716 NM_001012984 AK123796 BC032064 BC041612 BC064498 BC082249	-6099	+	TSC_hg19_v1_chr16_-_67700634 BC008284 AL136786 NM_032140	-6205	-	TSC_hg19_v1_chr16_+_67694862 NM_001037281 NM_016948 AB043634 BC015626 AF265565 AB041642 AJ277095 DQ893477 DQ896347 AB528401	-11945	+	TSC_hg19_v1_chr16_-_67753220 AK074382 BC107585 BC000757 AK307280 AK225997 NM_001243650 NM_030819	46409	-	TSC_hg19_v1_chr16_-_67840456 AB384605 AB040897 AK055727 AK298806 AK304030 BC099917 AK295171 AK295530	133584	-	TSC_hg19_v1_chr16_-_67840464 BC121176 BC121177 AY337313 NM_020850	133689	-	NM_001012984|C16orf86|388284|chromosome 16 open reading frame 86##AK123796|C16orf86|388284|chromosome 16 open reading frame 86##BC032064|C16orf86|388284|chromosome 16 open reading frame 86##BC041612|C16orf86|388284|chromosome 16 open reading frame 86##BC064498|C16orf86|388284|chromosome 16 open reading frame 86##BC082249|C16orf86|388284|chromosome 16 open reading frame 86##BC008284|C16orf48|84080|chromosome 16 open reading frame 48##AL136786|C16orf48|84080|chromosome 16 open reading frame 48##NM_032140|C16orf48|84080|chromosome 16 open reading frame 48##NM_001037281|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##NM_016948|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##AB043634|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##BC015626|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##AF265565|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##AB041642|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##AJ277095|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##DQ893477|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##DQ896347|PARD6A|50855|par-6 partitioning defective 6 homolog alpha (C. elegans)##AK074382|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##BC107585|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##BC000757|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##AK307280|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##AK225997|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##NM_001243650|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##NM_030819|GFOD2|81577|glucose-fructose oxidoreductase domain containing 2##AB040897|RANBP10|57610|RAN binding protein 10##AK055727|RANBP10|57610|RAN binding protein 10##AK298806|RANBP10|57610|RAN binding protein 10##AK304030|RANBP10|57610|RAN binding protein 10##BC099917|RANBP10|57610|RAN binding protein 10##AK295171|RANBP10|57610|RAN binding protein 10##AK295530|RANBP10|57610|RAN binding protein 10##BC121176|RANBP10|57610|RAN binding protein 10##BC121177|RANBP10|57610|RAN binding protein 10##AY337313|RANBP10|57610|RAN binding protein 10##NM_020850|RANBP10|57610|RAN binding protein 10	0.778153	CTCF.p2:-27:0.778
chr4	90355650	90355774	reg1012331.p1	10.516	+	TSC_hg19_v1_chr4_-_90229171 NM_198281	-126555	-	AK124616 TSC_hg19_v1_chr4_-_90228950	-126761	-	AK027653 NM_145715	-321745	+	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	402530	-	NM_001146055	403734	-	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	460350	+	NM_198281|GPRIN3|285513|GPRIN family member 3##AK124616|GPRIN3|285513|GPRIN family member 3##AK027653|TIGD2|166815|tigger transposable element derived 2##NM_145715|TIGD2|166815|tigger transposable element derived 2##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_001146055|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1	0.395175	CTCF.p2:8:0.395
chr11	4561006	4561098	reg1008790.p1	10.515	+	BC137056 BC137059 NM_001005171	-50944	+	BC137247 BC137248 NM_001005172	-90528	+	TSC_hg19_v1_chr11_-_4414904 BC010861 M62800 AK225564 NM_003141	-146146	-	AB463978 NM_001004137	5366	+	AF439154 NM_144663 AB528787	37997	-	BC136921 BC151144 NM_001005170	46968	+	BC137056|OR52K1|390036|olfactory receptor, family 52, subfamily K, member 1##BC137059|OR52K1|390036|olfactory receptor, family 52, subfamily K, member 1##NM_001005171|OR52K1|390036|olfactory receptor, family 52, subfamily K, member 1##BC137247|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##BC137248|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##NM_001005172|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##BC010861|TRIM21|6737|tripartite motif containing 21##M62800|TRIM21|6737|tripartite motif containing 21##AK225564|TRIM21|6737|tripartite motif containing 21##NM_003141|TRIM21|6737|tripartite motif containing 21##NM_001004137|OR52M1|119772|olfactory receptor, family 52, subfamily M, member 1##AF439154|C11orf40|143501|chromosome 11 open reading frame 40##NM_144663|C11orf40|143501|chromosome 11 open reading frame 40##BC136921|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##BC151144|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##NM_001005170|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	0.988978	CTCF.p2:-5:0.989
chr11	78356383	78356529	reg1012805.p1	10.515	+	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-70561	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-70664	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	-227580	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	795268	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	4088442	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	4255061	-	AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_080491|GAB2|9846|GRB2-associated binding protein 2##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)	0.962692	CTCF.p2:-11:0.963
chr20	10534128	10534264	reg1012288.p1	10.515	+	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-118220	+	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	-119357	-	AF221993 NM_018848	-121627	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	120008	-	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	120373	-	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1337253	+	BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3	0.995647	CTCF.p2:3:0.848
chr3	49208571	49208696	reg1010142.p1	10.515	+	TSC_hg19_v1_chr3_-_49203772 AK098658 NM_022903	-4856	-	TSC_hg19_v1_chr3_-_49203752 BC035516 AK022862	-4885	-	TSC_hg19_v1_chr3_-_49170490 X79683 NM_002292	-38089	-	TSC_hg19_v1_chr3_+_49209053 NM_173546 AK294160 AY129011 BC039083	404	+	NM_001080528	20657	-	BC036202 NM_178173	27227	+	AK098658|CCDC71|64925|coiled-coil domain containing 71##NM_022903|CCDC71|64925|coiled-coil domain containing 71##BC035516|CCDC71|64925|coiled-coil domain containing 71##AK022862|CCDC71|64925|coiled-coil domain containing 71##X79683|LAMB2|3913|laminin, beta 2 (laminin S)##NM_002292|LAMB2|3913|laminin, beta 2 (laminin S)##NM_173546|KLHDC8B|200942|kelch domain containing 8B##AK294160|KLHDC8B|200942|kelch domain containing 8B##AY129011|KLHDC8B|200942|kelch domain containing 8B##BC039083|KLHDC8B|200942|kelch domain containing 8B##NM_001080528|LOC646498|646498|uncharacterized LOC646498##BC036202|CCDC36|339834|coiled-coil domain containing 36##NM_178173|CCDC36|339834|coiled-coil domain containing 36	0.99931	CTCF.p2:-8:0.999
chr6	37175915	37176028	reg1010186.p2	10.515	+	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	-37849	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-202470	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-221701	-	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	49415	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	49628	+	TSC_hg19_v1_chr6_-_37225916 BC009625 NM_001162900	49956	-	NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B##BC009625|TMEM217|221468|transmembrane protein 217##NM_001162900|TMEM217|221468|transmembrane protein 217	0.788811	CTCF.p2:4:0.789
chr1	10554822	10554940	reg1008379.p1	10.514	+	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-19870	+	TSC_hg19_v1_chr1_-_10532605 NM_004401 NM_213566	-22259	-	TSC_hg19_v1_chr1_-_10532555 AB590590 BT006980 CU675773 BC000037 AF103799 AF087573 BC007721 AK313317 AK222546 U91985 BC007112	-22326	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	199670	-	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	301824	-	NM_001170754	487212	-	AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_004401|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##NM_213566|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BT006980|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC000037|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF103799|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF087573|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007721|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK313317|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK222546|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##U91985|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007112|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127	0.962387	CTCF.p2:4:0.962
chr11	134230264	134230411	reg1012520.p1	10.514	+	AK074855 AK074855 TSC_hg19_v1_chr11_+_134201905 AK074947 AK074947	-28417	+	NM_138342 BC040641 BC040641 AK074703 AK074703 TSC_hg19_v1_chr11_+_134201886 AY358497 AY358497	-28509	+	BC011001 NM_001080407	-84063	+	AB029396 BC010466 NM_018644 NM_054025 TSC_hg19_v1_chr11_-_134281917	51484	-	None	None	None	None	None	None	AK074855|GLB1L2|89944|galactosidase, beta 1-like 2##AK074855|GLB1L2|89944|galactosidase, beta 1-like 2##AK074947|GLB1L2|89944|galactosidase, beta 1-like 2##AK074947|GLB1L2|89944|galactosidase, beta 1-like 2##NM_138342|GLB1L2|89944|galactosidase, beta 1-like 2##BC040641|GLB1L2|89944|galactosidase, beta 1-like 2##BC040641|GLB1L2|89944|galactosidase, beta 1-like 2##AK074703|GLB1L2|89944|galactosidase, beta 1-like 2##AK074703|GLB1L2|89944|galactosidase, beta 1-like 2##AY358497|GLB1L2|89944|galactosidase, beta 1-like 2##AY358497|GLB1L2|89944|galactosidase, beta 1-like 2##BC011001|GLB1L3|112937|galactosidase, beta 1-like 3##NM_001080407|GLB1L3|112937|galactosidase, beta 1-like 3##AB029396|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##BC010466|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##NM_018644|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##NM_054025|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)	0.047964	
chr14	106743430	106743558	reg1010849.p2	10.514	+	AM279487 AF308557 Y17783 Y17784 HM774660 JN111012 AF103142 AY515002 HQ704054 JN110499 JN110977 JN111085 HM774129 HM774274 HM774585 HM774849 HQ704055 U21254 Y17140 AY050689 AY050700 AY392847 AY392855 AY393130 AY393134 AY393349 AY393375 AY393380 AY393622 AY393638 AY393642 AY393655 AY393684 AY393690 AY866668 DQ100948 AY393127 AF533986 AY866766 DQ926392 GU570247 AY866814 DQ100974 DQ926235 DQ926301 FJ039787 JN158459 AY944709 DQ535390 BC090939 AF062249 AF062286 AJ224083 GU179345 BC089421 BC066642 TSC_hg19_v1_chr14_-_106733637	-9978	-	L14821 U19885 U42468 X56526 DQ001068 L28052 AF283793 AF283795 AF283796 AF283798 AF283799 AF283805 AJ519221 AJ519266 AJ519267 AJ519271 AJ519324 AJ519325 AJ519330 AJ519337 L26907 L33035 L08083 AF431049 X67909 L08090 AF062136 AF062184 AF062205 AF062260 AF062270 AF062276 AF062280 AF174012 AF174019 AF174024 AF174029 AJ131062 AY172959 L01276 L11699 L23931 L38433 M26994 M26995 M62731 M99595 S72729 U43754 X17677 X65895 X65900 X81726 X81731 X81732 X81748 X81755 Z11946 Z47213 Z47214 Z47217 Z47226 Z47232 CU677431 L08088 Z14202 M18513 X14584 AK128301 Z14205 Z14201 Z14200 BC069020 M34024 BC015760 M29470 BC078671 TSC_hg19_v1_chr14_-_106725734 AK130476 AK092803 AK097010 AK097950 AK098817 AK128533 AK129776 AK301393 AX747738 BX640947 M97920	-17816	-	AF267078 U64476 DQ523922 AF460679 AF460691 U64467 DQ454508 DQ523923 AY003727 DQ454426 DQ454615 GQ232878 GQ232903 GQ232925 GQ232927 GQ232947 EU814957 JF810265 AY003761 AF103273 GU552695 DQ454618 FJ874064 GQ232772 GQ232846 GU552694 GU552734 GU552752 AY003728 HM996533 AY003827 AY003856 GQ232877 GU552710 AY003715 AY003717 AY003738 AY003843 AY003847 AY003852 DQ454401 DQ454562 GQ232908 AY003766 GQ232777 GQ232859 GQ232872 GQ232923 GU552704 GU552708 GU552718 GU552741 GU552742 GU552746 GU552748 GU552758 GU552759 DQ454687 DQ454876 DQ523884 DQ454518 FJ840380 FJ840175 FJ840178 FJ840222 FJ873867 Z11945 AY003806 DQ454747 FJ839967 FJ839989 FJ840090 FJ840195 FJ840312 FJ840319 FJ840320 FJ840327 FJ840338 FJ840391 FJ873815 FJ873824 FJ873849 FJ873872 FJ873885 FJ873902 FJ873910 FJ873913 FJ873916 FJ873922 FJ873935 FJ873946 FJ873974 FJ873975 FJ874010 FJ874023 FJ874034 FJ874046 FJ874048 FJ874074 FJ874087 GQ504854 HM116131 HM116209 HM116214 AF103210 AJ008183 AJ008196 AJ008214 AJ008241 DQ454767 AY003815 AY003870 AY003737 AY003774 AY003778 AY003820 DQ454753 EU433871 EU433883 GQ504883 HM996150 AY003857 GQ504910 AF103115 EU099172 EU099195 EU099110 AJ132560 AJ132561 AJ132562 AJ132563 EU099182 EU099264 AJ010334 DQ454751 EU099225 EU099256 HM996312 AY206990 DQ523924 DQ524170 GQ504968 TSC_hg19_v1_chr14_-_106725449 AM183988 AM183989 AM183991 AM279574 GQ232938 HQ703990 AF103328 AF103356 AF103073 AF103150 AF103286 AF103290 AF103371 HM774572 GQ504879 GQ504884 GQ504947 JN111000 AF103035 EU146335 AF103352 AF103353 AF103049 GQ504964 JN110538 JN110631 JN110645 JN110650 JN110677 JN110696 JN110699 JN110787 L03816 L03817 L03818 L03819 L04342 AF103198 AY062298 FJ385357 FJ385358 GQ504851 GQ504868 GQ504870 GQ504875 GQ504878 GQ504881 GQ504888 GQ504889 GQ504890 GQ504895 GQ504903 GQ504923 GQ504924 GQ504933 GQ504937 GQ504946 GQ504950 GQ504972 GQ504974 GQ504976 GQ504978 GQ504983 GQ504985 GQ504987 GQ504988 HM773970 HM773998 HM774045 HM774098 HM774232 HM774297 HM774352 HM774364 HM774372 HM774385 HM774431 HM774434 HM774459 HM774503 HM774582 HM774648 HM774689 HM774750 HM774890 HM774978 HQ703998 HQ703999 HQ704017 HQ704042 L26906 L33031 AF103369 AF103154 AF103366 AF165104 U41571 AF103321 AF103335 AJ008250 AY099259 EU146323 EU146326 EU146327 EU146329 EU146332 EU146342 EU146374 EU146387 X93001 X93003 Y18120 DQ100810 DQ100879 AJ271551 AJ271557 AJ272334 AJ298607 AJ300784 AY423185 DQ100843 L02256 L02262 L02264 L02266 L02268 L02269 AF001424 AF471287 AF485441 AF485447 AJ241351 AY422534 AY423163 AY646422 HM995130 L19917 AF485437 AF485457 AF485473 AJ006648 AJ300780 AY423180 L19903 L19920 U21262 U21272 AF103148 AY062299 HM995230 HM996491 AF062191 DQ100915 HM995048 AY062297 FN563767 X81742 AF098362 AY640484 U00525 X79164 AF062289 AF062297 AF062298 AF062301 AF062304 AF062307 AY866624 AY941927 AY971138 DQ100817 DQ524115 DQ926052 DQ926056 DQ926057 DQ926276 DQ926278 EF633810 EF633827 HM994987 HM994988 HM995202 HM995232 HM995233 HM995238 HM995242 HM995243 HM995256 HM995257 HM995259 HM995260 HM995261 HM995262 HM995263 HM995264 HM995266 HM995390 HM995391 HM995393 HM995422 HM995434 HM995436 HM995437 HM995438 HM995451 HM995466 HM995568 HM995590 HM995620 HM995822 HM995931 HM995959 HM996082 HM996159 HM996219 HM996232 Z98720 Z98721 AJ245230 AJ555259 DQ005303 DQ840756 Z96968 Z98718 AB027439 AB067177 AB087877 AF004323 AF174111 AJ233694 AJ308450 AJ508767 AY686918 AY781826 AY781828 AY866718 AY944694 AY944710 AY944718 DQ005292 DQ065685 DQ100684 DQ100710 DQ100713 DQ100794 DQ100838 DQ100851 DQ100860 DQ100890 DQ100975 DQ431645 DQ926026 DQ926027 DQ926030 DQ926044 DQ926045 DQ926046 DQ926047 DQ926048 DQ926076 DQ926128 DQ926134 DQ926185 DQ926288 DQ926298 DQ926358 DQ926375 DQ926580 DQ926584 EF177967 EF178003 EF178031 EF178096 EF178104 EF178138 EF633826 FJ385282 FJ385309 FJ385317 FJ385389 GU570312 HM995971 HQ129860 HQ378370 L19915 L19916 L19919 L43083 L43085 L48237 U21259 U58144 Y09384 Y09386 Y09388 AB021519 AB021521 AB021523 AB021526 AB021530 AB021533 AB021534 AB021536 AB021541 AB063654 AB063664 AB063672 AB063675 AB063799 AB063807 AB063811 AB063824 AB063849 AB063887 AB063890 AB066894 AB066973 AB066977 AB067077 AB067081 AB067095 AB067102 AB067124 AB067240 AB067250 AB067252 AB067259 AB067260 AB288084 AB585999 AF004322 AF004324 AF015123 AF015125 AF015126 AF015128 AF015129 AF015130 AF015132 AF015133 AF015134 AF015135 AF021986 AF022011 AF052520 AF052522 AF052524 AF062167 AF062251 AF115107 AF115108 AF115109 AF115110 AF123351 AF123354 AF123355 AF123356 AF123357 AF123358 AF123359 AF123360 AF123361 AF123363 AF123364 AF123365 AF123366 AF123367 AF123368 AF123369 AF123370 AF123371 AF123372 AF123373 AF123374 AF123375 AF123376 AF123377 AF123378 AF123379 AF174038 AF174057 AF174067 AF174077 AF174083 AF174089 AF174098 AF174101 AF174103 AF174105 AF231394 AF231395 AF231396 AF231397 AF231398 AF231399 AF231400 AF231402 AF231403 AF302822 AF396474 AF396476 AF442756 AF455924 AF471288 AF471289 AF471294 AF471317 AF471318 AF471321 AF471325 AF471326 AF471330 AF471331 AF471339 AF471349 AF471350 AF471358 AF471359 AF471369 AF471370 AF471371 AF471372 AF471375 AF471376 AF471384 AF471387 AJ006111 AJ006114 AJ006115 AJ006116 AJ006117 AJ006118 AJ006119 AJ006120 AJ239348 AJ239354 AJ239367 AJ239378 AJ243110 AJ245229 AJ249630 AJ271555 AJ276097 AJ298606 AJ298608 AJ298609 AJ298610 AJ298611 AJ300789 AJ300794 AJ313386 AJ414026 AJ519289 AJ519297 AJ555256 AJ555270 AJ579095 AJ579100 AJ579106 AJ579108 AJ579113 AJ579142 AJ579157 AJ579159 AJ579181 AJ579184 AJ579188 AJ579195 AJ579196 AJ579221 AJ579225 AJ579226 AJ579228 AJ579236 AJ579238 AJ579261 AJ579264 AJ579267 AJ579270 AJ579271 AJ579272 AJ579274 AJ579277 AJ579278 AJ579280 AJ579283 AJ617570 AJ627233 AJ627234 AJ627240 AJ627250 AM259136 AM259140 AM279605 AY033252 AY033255 AY055484 AY263417 AY263418 AY345920 AY376120 AY506559 AY554180 AY577295 AY640513 AY640540 AY686868 AY686874 AY781824 AY781873 AY789123 AY789125 AY789442 AY846269 AY866781 AY866785 AY866788 AY880990 AY885173 AY927662 AY941888 AY941899 AY941902 AY941930 AY941947 AY944688 AY944707 AY971091 AY971124 D83687 D83693 DQ065632 DQ065707 DQ100700 DQ100717 DQ100842 DQ212496 DQ212498 DQ212500 DQ328862 DQ379475 DQ535280 DQ535283 DQ535297 DQ535299 DQ535303 DQ535312 DQ535317 DQ535318 DQ535343 DQ535368 DQ535376 DQ535380 DQ535400 DQ535446 DQ535463 DQ535471 DQ535477 DQ535481 DQ926151 DQ926157 DQ926210 DQ926214 DQ926215 DQ926279 DQ926353 DQ926370 DQ926380 DQ926441 DQ926551 DQ926579 EF178054 EF633771 EF633773 EF633774 EF633775 EF633776 EF633777 EF633778 EF633822 EF633828 FJ385277 FJ385291 FJ385311 FJ385361 FJ385380 FJ385384 FJ481090 FJ492915 FJ492944 FN562944 FN562945 FN562946 FN562947 FN562948 FN562949 FN562950 FN562951 FN562952 FN562953 FN562954 FN562955 FN562956 FN562957 FN562958 FN562959 FN562960 FN562961 FN562962 FN562963 FN562964 FN562965 FN562966 FN562967 FN562968 FN563753 FN563754 FN563755 FN563756 FN563757 FN563758 FN563759 FN563760 FN563761 FN563763 FN563764 FN563770 FN563773 FN563774 FN563775 FN563776 FN563777 FN563778 FN563779 FN563782 FN563783 FN563787 FN563788 FN563790 FN563791 FN563792 FN563793 FN563794 FN563796 FN563797 FN563799 FN563801 FN563804 FN563806 FN563808 FN563809 FN563810 FN563815 FN563816 FN563819 FN563820 FN563821 FN563822 FN563823 FN563824 FN563825 FN563826 FN563827 FN563828 GU570309 GU570311 GU570316 GU570317 GU570318 GU570319 GU570322 GU570340 HM152515 HM152523 HQ129862 HQ689770 L12188 L14822 L25292 L34164 M17746 M17747 M17748 M17749 M57940 M57941 M57942 M57943 M57944 M87268 S55094 S67717 U00491 U00495 U00509 U00510 U00521 U00536 U00537 U00541 U00549 U07986 U27187 U38588 U64486 U76685 U77373 U82257 U93176 U95236 U95237 U96286 U97242 X62955 X62956 X62957 X62962 X62963 X62964 X62971 X69692 X98751 X99363 X99365 Z33900 Z33903 Z46382 Z74668 Z96954 Z96955 Z96956 Z96958 Z96967 Z96975 Z98714 Z98715 Z98716 Z98717 Z98719 Z98723 Z98725 AJ519288 AJ519312 S73957 X81746 AJ519239 AJ519328 AJ519258 AJ519219 AJ519235 AJ519237 AJ519238 AJ519240 AJ519244 AJ519248 AJ519252 AJ519257 AJ519259 AJ519263 AJ519264 AJ519265 AJ519269 AJ519272 AJ519273 AJ519276 AJ519277 AJ519283 AJ519285 AJ519286 AJ519290 AJ519291 AJ519296 AJ519300 AJ519301 AJ519302 AJ519303 AJ519307 AJ519314 AJ519316 AJ519317 AJ519318 AJ519319 AJ519320 AJ519321 AJ519322 AJ519326 AJ519327 AJ519329 AJ519331 AJ519333 AJ519334 AJ519336 AJ519338 AJ519339 HM995767 HM995894 HM995896 HM995906	-18125	-	AY393053 S85238 TSC_hg19_v1_chr14_-_106746153	2611	-	AJ305231 DQ118259 HM774835 DQ926094 AY866678 EU794438 Z80845 BC087841 TSC_hg19_v1_chr14_-_106774560	30941	-	U32154 AF460767 DQ524080 DQ454738 Y08403 HM774396 AF103161 AJ245070 AY866645 AM233757 AY670731 DQ005273 AB063909 AB363132 AJ556745 AY670715 AY670719 AY670726 AY670727 AY670745 AY670770 AY670773 AY670784 AY670819 AY670831 AY670837 AY670857 AY671081 AY671102 AY671324 AY671379 AY671400 AY671500 AY671586 AY671639 AY671641 AY671703 AY671775 AY671785 AY781815 AY781827 AY866636 DQ065711 DQ926028 DQ926188 DQ926206 FJ492934 AJ430733 EF178114 FJ385294 HM152518 AY392953 L28053 AY671012 AY671034 AY671045 AY671152 AY671174 AY671714 AY671721 L03677 Z75396 Z75404 L23570 BC073765 AK130813 AK301332 AK130585 AK128579 AK128568 AK129620 TSC_hg19_v1_chr14_-_106781004	37276	-	BC090939|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089421|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC066642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AY172959|IGHV4-31|28396|immunoglobulin heavy variable 4-31##X14584|IGHV3-23|28442|immunoglobulin heavy variable 3-23##AK128301|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC069020|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC015760|IGHM|3507|immunoglobulin heavy constant mu##BC078671|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092803|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097010|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097950|IGHM|3507|immunoglobulin heavy constant mu##AK098817|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129776|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640947|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AF103353|IGK@|50802|immunoglobulin kappa locus##AB087877|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##AF231396|IGHV3-23|28442|immunoglobulin heavy variable 3-23##AJ006111|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006114|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006115|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006117|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006118|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006119|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006120|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ519334|IGHV3-23|28442|immunoglobulin heavy variable 3-23##BC087841|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073765|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK130813|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130585|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128568|IGHD|3495|immunoglobulin heavy constant delta##AK129620|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.989732	CTCF.p2:0:0.990
chr2	96086757	96086873	reg1010614.p1	10.514	+	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	-18336	+	DQ148486 NM_001034914	-74048	+	TSC_hg19_v1_chr2_+_95963054 NM_013434 AB209076 AJ131730 AK095539 AK315437 BC012850 AF120102 AB528387 AF199599 AF367022 BT020075 CU680412 DQ148485 DQ892078 DQ895271 DQ895316	-123709	+	NM_001164464	63663	-	BC015353 NM_138800	170950	+	TSC_hg19_v1_chr2_-_96482383 BC117383 BC126153 AK057596	395630	-	AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##DQ148486|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_001034914|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_013434|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AJ131730|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK095539|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK315437|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC012850|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF120102|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF199599|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF367022|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BT020075|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ148485|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ892078|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895271|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895316|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_001164464|TRIM43B|653192|tripartite motif containing 43B##BC015353|TRIM43|129868|tripartite motif containing 43##NM_138800|TRIM43|129868|tripartite motif containing 43##AK057596|LINC00342|150759|long intergenic non-protein coding RNA 342	0.784756	CTCF.p2:12:0.785
chr9	129263290	129263388	reg1007767.p1	10.514	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-174172	+	AK309713 NM_001134778	-752862	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-753639	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	113422	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	303971	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	359605	+	NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34	0.999853	CTCF.p2:4:1.000
chr12	124468517	124468631	reg1011801.p1	10.512	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-10845	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-11375	-	NM_207437	-221533	+	AK126577 NM_181709	305135	+	TSC_hg19_v1_chr12_-_125002875 BC033087	534285	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	583501	-	AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##NM_207437|DNAH10|196385|dynein, axonemal, heavy chain 10##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2	0.996371	CTCF.p2:17:0.996
chr22	41633671	41633786	reg1009886.p2	10.512	+	AK097052 TSC_hg19_v1_chr22_+_41601315 AL136564 NM_031488 AK056443 AK307763 BC017191 AK074091 AJ305226 AJ305227 CR456482 AB463092 AM392807 AM393641 CU013032 CU013320 CU677853 DQ892312 DQ895512	-32403	+	TSC_hg19_v1_chr22_-_41593483 BC040700	-40239	-	TSC_hg19_v1_chr22_+_41488610 NM_001429 BC053889	-145102	+	TSC_hg19_v1_chr22_-_41634074 BC048421	373	-	BC102006 BC040188 TSC_hg19_v1_chr22_-_41636899 BC068590 NM_138481	3166	-	BC014044 TSC_hg19_v1_chr22_-_41682182	48448	-	AK097052|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##AL136564|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##NM_031488|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##AK056443|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##AK307763|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##BC017191|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##AK074091|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##AJ305226|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##AJ305227|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##CR456482|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##AM392807|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##AM393641|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##CU013032|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##CU013320|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##DQ892312|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##DQ895512|L3MBTL2|83746|l(3)mbt-like 2 (Drosophila)##NM_001429|EP300|2033|E1A binding protein p300##BC053889|EP300|2033|E1A binding protein p300##BC048421|CHADL|150356|chondroadherin-like##BC040188|CHADL|150356|chondroadherin-like##BC068590|CHADL|150356|chondroadherin-like##NM_138481|CHADL|150356|chondroadherin-like##BC014044|RANGAP1|5905|Ran GTPase activating protein 1	0.636932	CTCF.p2:-4:0.481
chr7	44025615	44025739	reg1009763.p1	10.512	+	TSC_hg19_v1_chr7_+_43966046 NM_015983 BC004104 AK001446 AF125045 AB528947 CU678576	-59608	+	TSC_hg19_v1_chr7_-_43966000 NM_001077664 AK302459	-59700	-	TSC_hg19_v1_chr7_-_43946217 CR749398 NM_001077663 NM_001204871 NM_017920	-79347	-	AF412027 NM_175064	14810	+	TSC_hg19_v1_chr7_-_44058749 BC062722 BX537878 BX538054 BC017341 BC017250 BC105584 AK296066	33100	-	TSC_hg19_v1_chr7_+_44078680 BC081571 BC024303	53072	+	NM_015983|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##BC004104|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##AK001446|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##AF125045|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##NM_001077664|URGCP|55665|upregulator of cell proliferation##AK302459|URGCP|55665|upregulator of cell proliferation##CR749398|URGCP|55665|upregulator of cell proliferation##NM_001077663|URGCP|55665|upregulator of cell proliferation##NM_001204871|URGCP-MRPS24|100534592|URGCP-MRPS24 readthrough##NM_017920|URGCP|55665|upregulator of cell proliferation##AF412027|SPDYE1|285955|speedy homolog E1 (Xenopus laevis)##NM_175064|SPDYE1|285955|speedy homolog E1 (Xenopus laevis)##BC062722|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BX537878|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BX538054|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC017341|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC017250|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC105584|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##AK296066|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC081571|FLJ35390|255031|uncharacterized LOC255031##BC024303|FLJ35390|255031|uncharacterized LOC255031	0.987588	CTCF.p2:-13:0.988
chr9	107919481	107919602	reg1008804.p2	10.512	+	NM_005502 TSC_hg19_v1_chr9_-_107690527	-229012	-	AK024328 TSC_hg19_v1_chr9_-_107690437 AF258627	-229061	-	BC146856 TSC_hg19_v1_chr9_-_107690419 AF285167 BC034824 BC141816 BC142693 AK022254	-229157	-	TSC_hg19_v1_chr9_+_108006931 NM_080546	87372	+	TSC_hg19_v1_chr9_+_108006937 AJ272365	87410	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	87526	+	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##NM_080546|SLC44A1|23446|solute carrier family 44, member 1##AJ272365|SLC44A1|23446|solute carrier family 44, member 1##AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1	1.040624	CTCF.p2:7:0.987
chr13	45057970	45058093	reg1009528.p1	10.511	+	NM_001243798	-9595	-	NM_001243797	-46642	-	NM_006022 TSC_hg19_v1_chr13_-_45011118	-46942	-	AK091854 AX747223 TSC_hg19_v1_chr13_-_45150467 BC136475 BC136482	92399	-	TSC_hg19_v1_chr13_-_45150604 AB082525 NM_001243799 NM_183422	92619	-	TSC_hg19_v1_chr13_-_45563607 AB528019 AF159548 BC001436 AK314242 NM_012345	505564	-	NM_001243798|TSC22D1|8848|TSC22 domain family, member 1##NM_001243797|TSC22D1|8848|TSC22 domain family, member 1##NM_006022|TSC22D1|8848|TSC22 domain family, member 1##AK091854|TSC22D1|8848|TSC22 domain family, member 1##BC136475|TSC22D1|8848|TSC22 domain family, member 1##BC136482|TSC22D1|8848|TSC22 domain family, member 1##AB082525|TSC22D1|8848|TSC22 domain family, member 1##NM_001243799|TSC22D1|8848|TSC22 domain family, member 1##NM_183422|TSC22D1|8848|TSC22 domain family, member 1##AF159548|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##BC001436|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AK314242|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##NM_012345|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1	0.977713	CTCF.p2:-14:0.978
chr9	112203127	112203253	reg1010951.p1	10.511	+	AK296265 AK296388 AK316118 NM_001145371 NM_001145372	-11977	-	TSC_hg19_v1_chr9_-_112083330 AB032179	-119900	-	TSC_hg19_v1_chr9_-_112083007 AF153416 AF153418 NM_018424 NM_019114	-120178	-	BX648253 NM_001145369 NM_001145370	10473	-	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	57399	-	BC039306 NM_001037293 AK095003	199879	+	AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AB032179|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF153416|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF153418|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_018424|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_019114|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##BX648253|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145369|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145370|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2	0.959778	CTCF.p2:-6:0.960
chr9	123744043	123744186	reg1009740.p1	10.511	+	TSC_hg19_v1_chr9_-_123691445 NM_001190945 AK315476	-52654	-	AK090468 NM_005658	-54942	-	AB590501 BT019408 CU692854 TSC_hg19_v1_chr9_-_123688443 U19261 BC024145	-55711	-	M57729 BC113738 BC113740 AK310774 AK310780 BC022299 NM_001735	68430	-	TSC_hg19_v1_chr9_+_123837236 AK307387 BC089415	93148	+	TSC_hg19_v1_chr9_-_123837410 AB209031	93316	-	NM_001190945|TRAF1|7185|TNF receptor-associated factor 1##AK315476|TRAF1|7185|TNF receptor-associated factor 1##AK090468|TRAF1|7185|TNF receptor-associated factor 1##NM_005658|TRAF1|7185|TNF receptor-associated factor 1##BT019408|TRAF1|7185|TNF receptor-associated factor 1##U19261|TRAF1|7185|TNF receptor-associated factor 1##BC024145|TRAF1|7185|TNF receptor-associated factor 1##M57729|C5|727|complement component 5##BC113738|C5|727|complement component 5##BC113740|C5|727|complement component 5##AK310774|C5|727|complement component 5##AK310780|C5|727|complement component 5##BC022299|C5|727|complement component 5##NM_001735|C5|727|complement component 5##AK307387|CNTRL|11064|centriolin##BC089415|CNTRL|11064|centriolin##AB209031|C5|727|complement component 5	0.850899	CTCF.p2:12:0.851
chr9	31120050	31120154	reg1009786.p1	10.511	+	AK056372 NM_152570	-2400800	-	AK057806 JN681271 NM_145005	-3546261	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-3546631	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	1264488	+	TSC_hg19_v1_chr9_+_32384622 AK057904	1264525	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	1264547	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.240894	CTCF.p2:-21:0.241
chr17	46026748	46026869	reg1011104.p1	10.510	+	TSC_hg19_v1_chr17_+_46019041 AF468030	-7762	+	NM_018129 TSC_hg19_v1_chr17_+_46018965 AK001397 AK303665 AK303792 AK223242 AK303536 BC006525	-7864	+	NM_003110 TSC_hg19_v1_chr17_+_45973601 BC005914 BC016680 BC033814	-53228	+	BC002865 NM_024320 TSC_hg19_v1_chr17_-_46035208 AK309589	8374	-	AK223387 NM_176096 TSC_hg19_v1_chr17_+_46048452	21624	+	TSC_hg19_v1_chr17_+_46048471 AF217982 AK023722	21661	+	AF468030|PNPO|55163|pyridoxamine 5'-phosphate oxidase##NM_018129|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK001397|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK303665|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK303792|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK223242|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK303536|PNPO|55163|pyridoxamine 5'-phosphate oxidase##BC006525|PNPO|55163|pyridoxamine 5'-phosphate oxidase##NM_003110|SP2|6668|Sp2 transcription factor##BC005914|SP2|6668|Sp2 transcription factor##BC016680|SP2|6668|Sp2 transcription factor##BC033814|SP2|6668|Sp2 transcription factor##BC002865|PRR15L|79170|proline rich 15-like##NM_024320|PRR15L|79170|proline rich 15-like##AK309589|PRR15L|79170|proline rich 15-like##AK223387|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##NM_176096|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF217982|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK023722|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3	0.986608	CTCF.p2:-20:0.976
chr5	156243144	156243262	reg1009426.p1	10.510	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	-489030	+	BX537948 NM_000337 NM_001128209 NM_172244	-489443	+	NM_001099293 AK302388	-1849917	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	147032	-	BC013325 TSC_hg19_v1_chr5_-_156485247	241980	-	TSC_hg19_v1_chr5_-_156485459 NM_001099414 NM_012206	242262	-	BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC013325|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_001099414|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_012206|HAVCR1|26762|hepatitis A virus cellular receptor 1	0.999079	CTCF.p2:18:0.999
chr7	55790670	55790803	reg1010692.p1	10.510	+	TSC_hg19_v1_chr7_-_55640198 NM_030796	-150526	-	TSC_hg19_v1_chr7_-_55640196 AK075391 AK225755	-150573	-	BC016650 AK314338 TSC_hg19_v1_chr7_-_55640107	-150631	-	AK301928 NM_207366	139726	-	TSC_hg19_v1_chr7_+_55955148 BC094796 BC048108	164433	+	AK097282 NM_182633 AB464411	189612	+	NM_030796|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK075391|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK225755|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##BC016650|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK314338|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK301928|SEPT14|346288|septin 14##NM_207366|SEPT14|346288|septin 14##BC094796|ZNF713|349075|zinc finger protein 713##AK097282|ZNF713|349075|zinc finger protein 713##NM_182633|ZNF713|349075|zinc finger protein 713	0.15934	
chr1	152114582	152114713	reg1011691.p1	10.509	+	NM_007113	-28092	-	BC137493 AY456639 NM_001008536	-53113	-	TSC_hg19_v1_chr1_-_152009493 D38583 NM_005620	-105147	-	AY396742 NM_001122965	17056	-	CR933683 TSC_hg19_v1_chr1_+_152161805	47148	+	AB180729 NM_001009931 AY396741	82022	-	NM_007113|TCHH|7062|trichohyalin##BC137493|TCHHL1|126637|trichohyalin-like 1##AY456639|TCHHL1|126637|trichohyalin-like 1##NM_001008536|TCHHL1|126637|trichohyalin-like 1##D38583|S100A11|6282|S100 calcium binding protein A11##NM_005620|S100A11|6282|S100 calcium binding protein A11##AY396742|RPTN|126638|repetin##NM_001122965|RPTN|126638|repetin##AB180729|HRNR|388697|hornerin##NM_001009931|HRNR|388697|hornerin##AY396741|HRNR|388697|hornerin	0.984887	CTCF.p2:-11:0.985
chr11	62803261	62803392	reg1011561.p1	10.509	+	AK307850 AK298341 AB042505 AK298351 AK313187 BC022387 NM_001184732 NM_001184733 NM_001184736 NM_004254	-20028	-	AK298374 AF057039 AF104038 AF124373 AB009698 AB009697 AK091879 BC033682 AK055764 NM_004790 NM_153276 NM_153277 NM_153278	-50894	-	BC022984 NM_000738 AJ006520 TSC_hg19_v1_chr11_-_62689135	-114253	-	BC034394 NM_001136506	108366	-	AK127610 BC101315 BC101314 AY437532 BC101316 BC101317 NM_199352	193734	-	AK298430 AB075876 NM_001039752	254074	+	AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298374|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF057039|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF104038|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF124373|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009698|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009697|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK091879|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##BC033682|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK055764|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_004790|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153276|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153277|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153278|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1##NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1##AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1##BC034394|SLC22A24|283238|solute carrier family 22, member 24##NM_001136506|SLC22A24|283238|solute carrier family 22, member 24##AK127610|SLC22A25|387601|solute carrier family 22, member 25##BC101315|SLC22A25|387601|solute carrier family 22, member 25##BC101314|SLC22A25|387601|solute carrier family 22, member 25##AY437532|SLC22A25|387601|solute carrier family 22, member 25##BC101316|SLC22A25|387601|solute carrier family 22, member 25##BC101317|SLC22A25|387601|solute carrier family 22, member 25##NM_199352|SLC22A25|387601|solute carrier family 22, member 25##AK298430|SLC22A10|387775|solute carrier family 22, member 10##AB075876|SLC22A10|387775|solute carrier family 22, member 10##NM_001039752|SLC22A10|387775|solute carrier family 22, member 10	0.997418	CTCF.p2:0:0.997
chr14	24901088	24901197	reg1009723.p2	10.509	+	TSC_hg19_v1_chr14_+_24899159 NM_015299 AK291680 BX161465 BC042554	-1972	+	AY359070 NM_001039771	-2412	-	TSC_hg19_v1_chr14_+_24868230 BC065283 NM_025081 AK021873	-32886	+	BX161384 TSC_hg19_v1_chr14_-_24911979 BC008566 AF226050 AK123513 BC000989 NM_020195	10752	-	AK056368 TSC_hg19_v1_chr14_+_24912196	11046	+	DQ082727 DQ082729 AB451464 AB590823 CU686784 M69136 BC069110 BC069370 BC069490 BC103974 BC103975 NM_001836	76303	-	NM_015299|KHNYN|23351|KH and NYN domain containing##AK291680|KHNYN|23351|KH and NYN domain containing##BX161465|KHNYN|23351|KH and NYN domain containing##BC042554|KHNYN|23351|KH and NYN domain containing##AY359070|CBLN3|643866|cerebellin 3 precursor##NM_001039771|CBLN3|643866|cerebellin 3 precursor##BC065283|NYNRIN|57523|NYN domain and retroviral integrase containing##NM_025081|NYNRIN|57523|NYN domain and retroviral integrase containing##AK021873|NYNRIN|57523|NYN domain and retroviral integrase containing##BX161384|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##BC008566|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##AF226050|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##AK123513|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##BC000989|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##NM_020195|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##DQ082727|CMA1|1215|chymase 1, mast cell##DQ082729|CMA1|1215|chymase 1, mast cell##AB451464|CMA1|1215|chymase 1, mast cell##M69136|CMA1|1215|chymase 1, mast cell##BC069110|CMA1|1215|chymase 1, mast cell##BC069370|CMA1|1215|chymase 1, mast cell##BC069490|CMA1|1215|chymase 1, mast cell##BC103974|CMA1|1215|chymase 1, mast cell##BC103975|CMA1|1215|chymase 1, mast cell##NM_001836|CMA1|1215|chymase 1, mast cell	0.762574	CTCF.p2:8:0.763
chr20	3749393	3749497	reg1010084.p2	10.509	+	TSC_hg19_v1_chr20_-_3748383 BC012196 AK124341 BC024036 AK000557 AK024220 AK225109 AK308520 BC069204 NM_001039140	-1036	-	NM_001197327 NM_052970 AK297120 TSC_hg19_v1_chr20_+_3713341 AK301294 BC090857 BC110881 AK056712 BC117284 BC126263 BC143932	-36078	+	AF230073 BC141884 NM_023068	-61671	-	BC022476 AL080154 EF560745 NM_015417 AK313766	12641	-	BC012297 BC003649 TSC_hg19_v1_chr20_-_3765799 BC033658 BC040446	16398	-	TSC_hg19_v1_chr20_-_3767358 X05299 AB464478 AF002713 BC053847 NM_001810	17690	-	BC012196|C20orf27|54976|chromosome 20 open reading frame 27##AK124341|C20orf27|54976|chromosome 20 open reading frame 27##BC024036|C20orf27|54976|chromosome 20 open reading frame 27##AK000557|C20orf27|54976|chromosome 20 open reading frame 27##AK024220|C20orf27|54976|chromosome 20 open reading frame 27##AK225109|C20orf27|54976|chromosome 20 open reading frame 27##AK308520|C20orf27|54976|chromosome 20 open reading frame 27##BC069204|C20orf27|54976|chromosome 20 open reading frame 27##NM_001039140|C20orf27|54976|chromosome 20 open reading frame 27##NM_001197327|HSPA12B|116835|heat shock 70kD protein 12B##NM_052970|HSPA12B|116835|heat shock 70kD protein 12B##AK297120|HSPA12B|116835|heat shock 70kD protein 12B##AK301294|HSPA12B|116835|heat shock 70kD protein 12B##BC090857|HSPA12B|116835|heat shock 70kD protein 12B##BC110881|HSPA12B|116835|heat shock 70kD protein 12B##AK056712|HSPA12B|116835|heat shock 70kD protein 12B##BC117284|HSPA12B|116835|heat shock 70kD protein 12B##BC126263|HSPA12B|116835|heat shock 70kD protein 12B##BC143932|HSPA12B|116835|heat shock 70kD protein 12B##AF230073|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##BC141884|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##NM_023068|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##BC022476|SPEF1|25876|sperm flagellar 1##AL080154|SPEF1|25876|sperm flagellar 1##EF560745|SPEF1|25876|sperm flagellar 1##NM_015417|SPEF1|25876|sperm flagellar 1##AK313766|SPEF1|25876|sperm flagellar 1##BC012297|CENPB|1059|centromere protein B, 80kDa##BC003649|CENPB|1059|centromere protein B, 80kDa##BC033658|CENPB|1059|centromere protein B, 80kDa##BC040446|CENPB|1059|centromere protein B, 80kDa##X05299|CENPB|1059|centromere protein B, 80kDa##AF002713|CENPB|1059|centromere protein B, 80kDa##BC053847|CENPB|1059|centromere protein B, 80kDa##NM_001810|CENPB|1059|centromere protein B, 80kDa	0.751502	CTCF.p2:-6:0.752
chr2	233006876	233007015	reg1012139.p1	10.509	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-180585	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	-215912	-	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-355829	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	236438	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	264631	+	AK313163 NM_001631 BC132678 M31008 M15694	313925	+	AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal	0.987451	CTCF.p2:16:0.987
chr7	102214189	102214303	reg1010673.p1	10.509	+	AF468111 BC110985 TSC_hg19_v1_chr7_-_102213031 AB209398 BC141857 AK309487 NM_001097615	-1206	-	AJ277739 AJ277740 AJ277741 AB384935 BC056864 BC071870 TSC_hg19_v1_chr7_-_102212997 BC044209 BC050598	-1259	-	AK302217 NM_001031618 NM_001166339	-22568	+	HQ258652 BC110873 TSC_hg19_v1_chr7_-_102257170 AB011110 BC113663 BC143584 BC143585 AK308653	42911	-	TSC_hg19_v1_chr7_-_102257205 AK026441 AK310176 NM_001079877 NM_006989 AY029206	42978	-	EU341824 NM_001114403 AK296589	69030	-	AF468111|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AB209398|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_001097615|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277739|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AJ277740|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277741|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##HQ258652|RASA4|10156|RAS p21 protein activator 4##BC110873|RASA4|10156|RAS p21 protein activator 4##AB011110|RASA4|10156|RAS p21 protein activator 4##BC113663|RASA4|10156|RAS p21 protein activator 4##BC143584|RASA4|10156|RAS p21 protein activator 4##BC143585|RASA4|10156|RAS p21 protein activator 4##AK308653|RASA4|10156|RAS p21 protein activator 4##AK026441|RASA4|10156|RAS p21 protein activator 4##AK310176|RASA4|10156|RAS p21 protein activator 4##NM_001079877|RASA4|10156|RAS p21 protein activator 4##NM_006989|RASA4|10156|RAS p21 protein activator 4##EU341824|UPK3BL|100134938|uroplakin 3B-like##NM_001114403|UPK3BL|100134938|uroplakin 3B-like	0.830069	CTCF.p2:-6:0.830
chr11	119544604	119544733	reg1007181.p1	10.508	+	BC037832 NM_006288	-250425	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-250759	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	-292269	-	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	54714	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	454878	-	AK299472 TSC_hg19_v1_chr11_-_120008323	463604	-	BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29	0.346859	CTCF.p2:-9:0.347
chr1	144972968	144973072	reg1009754.p2	10.508	+	BC132717 TSC_hg19_v1_chr1_-_144932057 BC004860 NM_001002811	-40973	-	CU687328 TSC_hg19_v1_chr1_-_144931874 BC078660	-41209	-	AY894562 AY894567 AY894568 AY894572 AY894574 NM_001037675	-358062	+	AL832024 AB042556 AL831815 TSC_hg19_v1_chr1_-_144994880	21841	-	AB042557 TSC_hg19_v1_chr1_-_144994917 AL833273 BC005949	21897	-	TSC_hg19_v1_chr1_-_144994947 NM_001002812 NM_014644 NM_001002810 NM_001198834 BC026270 NM_001195261	21992	-	BC132717|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC004860|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001002811|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC078660|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894567|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894568|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894572|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894574|NBPF9|400818|neuroblastoma breakpoint family, member 9##NM_001037675|NBPF9|400818|neuroblastoma breakpoint family, member 9##AL832024|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AL831815|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AB042557|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AL833273|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001002812|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_014644|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001002810|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001198834|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001195261|PDE4DIP|9659|phosphodiesterase 4D interacting protein	0.0	
chr16	67555090	67555223	reg1009940.p1	10.508	+	NM_001138 U88063	-37441	-	CU679153 DQ893270 DQ896601 X71490 TSC_hg19_v1_chr16_-_67515051 AK300570 AK313035 AK125522 BC008861 NM_004691	-40112	-	TSC_hg19_v1_chr16_+_67465023 U26726 BC036780 BC064536 NM_000196 U14631	-90126	+	TSC_hg19_v1_chr16_+_67562734 NM_024519 AK127792 NM_001193522 AK307467 BC012730	7585	+	NM_001193523 AK293748	8428	+	TSC_hg19_v1_chr16_+_67571364 NM_001193524 BC021284 AK295677	16231	+	NM_001138|AGRP|181|agouti related protein homolog (mouse)##U88063|AGRP|181|agouti related protein homolog (mouse)##DQ893270|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##DQ896601|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##X71490|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK300570|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK313035|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK125522|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##BC008861|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_004691|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_024519|FAM65A|79567|family with sequence similarity 65, member A##AK127792|FAM65A|79567|family with sequence similarity 65, member A##NM_001193522|FAM65A|79567|family with sequence similarity 65, member A##AK307467|FAM65A|79567|family with sequence similarity 65, member A##NM_001193523|FAM65A|79567|family with sequence similarity 65, member A##AK293748|FAM65A|79567|family with sequence similarity 65, member A##NM_001193524|FAM65A|79567|family with sequence similarity 65, member A##AK295677|FAM65A|79567|family with sequence similarity 65, member A	0.169894	
chr7	130987995	130988107	reg1010630.p1	10.508	+	AK294384 NM_001145354	-193197	+	TSC_hg19_v1_chr7_-_130792857 BC047367	-195192	-	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-569124	-	NM_013255 TSC_hg19_v1_chr7_+_131012611	24555	+	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	24588	+	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	253312	-	AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##BC047367|FLJ43663|378805|uncharacterized LOC378805##AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like	0.972458	CTCF.p2:13:0.972
chr11	86689964	86690072	reg1010128.p1	10.507	+	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	-23630	-	TSC_hg19_v1_chr11_-_86666094 AY462097	-23911	-	NM_007173 TSC_hg19_v1_chr11_+_86511583 AK316508 AK075362 AK315562 AK304301 AK304054 BC063022 AL136914 BC001278 AF015287 AF193611 AY359033	-178466	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	58960	+	AK024853 TSC_hg19_v1_chr11_+_87032449	342424	+	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	1218574	-	BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##AY462097|FZD4|8322|frizzled family receptor 4##NM_007173|PRSS23|11098|protease, serine, 23##AK075362|PRSS23|11098|protease, serine, 23##AK315562|PRSS23|11098|protease, serine, 23##AK304301|PRSS23|11098|protease, serine, 23##AK304054|PRSS23|11098|protease, serine, 23##AL136914|PRSS23|11098|protease, serine, 23##BC001278|PRSS23|11098|protease, serine, 23##AF015287|PRSS23|11098|protease, serine, 23##AF193611|PRSS23|11098|protease, serine, 23##AY359033|PRSS23|11098|protease, serine, 23##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##AK024853|TMEM135|65084|transmembrane protein 135##BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family	0.98999	CTCF.p2:6:0.990
chr17	10640537	10640662	reg1011758.p1	10.507	+	AY550194 NM_001004313	-6954	-	NM_020233 BC070155 AB073393 AK292629 BC001294	-39651	+	TSC_hg19_v1_chr17_-_10600869 DQ891605 DQ894798 AF026852 AF183424 BC015504 AK098826 AK315595 AK074588 NM_004589	-39746	-	AK021549 TSC_hg19_v1_chr17_-_10741398 AK299808 NM_001101387	100808	-	NM_001173461 NM_001173462 NM_207386	504140	+	AK094349 TSC_hg19_v1_chr17_+_11465221 BC105704 BC105705 BC105707 BC105706	824597	+	AY550194|TMEM220|388335|transmembrane protein 220##NM_001004313|TMEM220|388335|transmembrane protein 220##NM_020233|C17orf48|56985|chromosome 17 open reading frame 48##BC070155|C17orf48|56985|chromosome 17 open reading frame 48##AB073393|C17orf48|56985|chromosome 17 open reading frame 48##AK292629|C17orf48|56985|chromosome 17 open reading frame 48##BC001294|C17orf48|56985|chromosome 17 open reading frame 48##DQ891605|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##DQ894798|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF026852|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF183424|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##BC015504|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK098826|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK315595|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK074588|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_004589|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK021549|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##AK299808|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##NM_001101387|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##NM_001173461|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_001173462|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_207386|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##AK094349|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105704|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105705|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105707|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105706|SHISA6|388336|shisa homolog 6 (Xenopus laevis)	0.992841	CTCF.p2:-3:0.993
chr20	43015258	43015384	reg1011874.p1	10.507	+	TSC_hg19_v1_chr20_+_42984338 AY680696 AY680697 AY680698 NM_001030003 NM_001030004 NM_175914 FJ608822 HQ692868	-30930	+	TSC_hg19_v1_chr20_+_42984088 AK096973	-31228	+	NM_178491	-49696	+	TSC_hg19_v1_chr20_-_43024303 AF143870	9003	-	TSC_hg19_v1_chr20_+_43029888 Z49825 NM_000457 NM_178849 NM_178850	14573	+	X87872 X87870 TSC_hg19_v1_chr20_+_43029954 X87871	14625	+	AY680696|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AY680697|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AY680698|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_001030003|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_001030004|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_175914|HNF4A|3172|hepatocyte nuclear factor 4, alpha##FJ608822|HNF4A|3172|hepatocyte nuclear factor 4, alpha##HQ692868|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AK096973|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_178491|R3HDML|140902|R3H domain containing-like##Z49825|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_000457|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_178849|HNF4A|3172|hepatocyte nuclear factor 4, alpha##NM_178850|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87872|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87870|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87871|HNF4A|3172|hepatocyte nuclear factor 4, alpha	0.984081	CTCF.p2:0:0.984
chr7	103913346	103913473	reg1012668.p1	10.507	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-64978	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-283413	-	TSC_hg19_v1_chr7_-_103086511 AF523354 AY256823 AY256824 AY256825 AK126898 NM_001167962 NM_198999 NM_206883 NM_206884 NM_206885	-826842	-	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	55809	+	TSC_hg19_v1_chr7_-_104567089 BC050337	653681	-	TSC_hg19_v1_chr7_-_104653491 AK124046	740073	-	DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##AF523354|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256823|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256824|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256825|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AK126898|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_001167962|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_198999|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206883|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206884|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206885|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC050337|LOC723809|723809|uncharacterized LOC723809##AK124046|LOC100216545|100216545|uncharacterized LOC100216545	0.26914	CTCF.p2:6:0.269
chr11	66601822	66601951	reg1009131.p1	10.504	+	TSC_hg19_v1_chr11_+_66512242 AK302025	-89586	+	TSC_hg19_v1_chr11_+_66512221 BC028240 NM_024650	-89685	+	AB464240 BC139788 AB008567 NM_006946	-113096	-	CU688443 TSC_hg19_v1_chr11_-_66610832	8883	-	AF121951 NM_001032279 NM_005133 BC093726 BC093728 TSC_hg19_v1_chr11_+_66610911 BC052622 Y13835	9019	+	TSC_hg19_v1_chr11_+_66624583 BC071866	22662	+	AK302025|C11orf80|79703|chromosome 11 open reading frame 80##BC028240|C11orf80|79703|chromosome 11 open reading frame 80##NM_024650|C11orf80|79703|chromosome 11 open reading frame 80##BC139788|SPTBN2|6712|spectrin, beta, non-erythrocytic 2##AB008567|SPTBN2|6712|spectrin, beta, non-erythrocytic 2##NM_006946|SPTBN2|6712|spectrin, beta, non-erythrocytic 2##AF121951|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##NM_001032279|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##NM_005133|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##BC093726|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##BC093728|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##BC052622|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##Y13835|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##BC071866|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4	0.044759	
chr2	36734611	36734733	reg1008789.p1	10.504	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	-151270	+	TSC_hg19_v1_chr2_+_36582920 AY358371	-151710	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-2910327	-	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	90610	-	NM_001177969 NM_001177970 NM_001177971 NM_001177972 NM_053276 AK299426 TSC_hg19_v1_chr2_+_36923849	189174	+	TSC_hg19_v1_chr2_+_36923944 BC061519 AK056772 AK292149 AY358338 AL832679 AF063833 BC128260	189288	+	AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001177969|VIT|5212|vitrin##NM_001177970|VIT|5212|vitrin##NM_001177971|VIT|5212|vitrin##NM_001177972|VIT|5212|vitrin##NM_053276|VIT|5212|vitrin##AK299426|VIT|5212|vitrin##BC061519|VIT|5212|vitrin##AK056772|VIT|5212|vitrin##AK292149|VIT|5212|vitrin##AY358338|VIT|5212|vitrin##AL832679|VIT|5212|vitrin##AF063833|VIT|5212|vitrin##BC128260|VIT|5212|vitrin	0.22851	CTCF.p2:7:0.229
chr10	97006420	97006529	reg1010796.p1	10.503	+	AK126134 NM_207321	-52518	+	M21942 M21941 DQ891400 DQ894579 M17397 M17398 AK303813 Y00498 AK292753 AK293327 AK293328 AK298401 AK315823 BC020596 NM_000770 NM_001198853 NM_001198854 NM_001198855	-177311	-	TSC_hg19_v1_chr10_+_96698414 AK289420 AK298458 BC020754 NM_000771 BC070317 M61855 M61857 BC125054 D00173 M21939 M15331 S46963	-308032	+	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	44308	-	AM393082 NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_006434	194441	-	TSC_hg19_v1_chr10_-_97321129 AB037717 BC152463 AK022468 AK300407 AK304753 AL117472 AM260536 NM_015385 NM_024991	314665	-	AK126134|C10orf129|142827|chromosome 10 open reading frame 129##NM_207321|C10orf129|142827|chromosome 10 open reading frame 129##M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1##AM393082|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1##NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1##AB037717|SORBS1|10580|sorbin and SH3 domain containing 1##BC152463|SORBS1|10580|sorbin and SH3 domain containing 1##AK022468|SORBS1|10580|sorbin and SH3 domain containing 1##AK300407|SORBS1|10580|sorbin and SH3 domain containing 1##AK304753|SORBS1|10580|sorbin and SH3 domain containing 1##AL117472|SORBS1|10580|sorbin and SH3 domain containing 1##AM260536|SORBS1|10580|sorbin and SH3 domain containing 1##NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1##NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1	1.073281	CTCF.p2:-11:0.994
chr1	28686281	28686407	reg1010282.p1	10.503	+	NM_001127350 NM_017638 AK296130 AK000052 AB107222 BC002694 TSC_hg19_v1_chr1_+_28655576	-30797	+	TSC_hg19_v1_chr1_+_28586034 NM_031459 BC013304 AY123223 BC033719 AL136551 AK315710 DQ892827 DQ896073 EU831582 EU831667 AB529110 CU680558	-100186	+	TSC_hg19_v1_chr1_+_28562634 NM_016311 NM_178190 NM_178191 AK316600 BC009677 AK000934 AB029042 BT009849 CR457097 EU832478 EU832558 BC017562 BC004955	-123695	+	TSC_hg19_v1_chr1_+_28696251 NM_001048183 CR749449 AK025436 BC029266 BC016152 BC068508	9881	+	NM_023923 BC021247	78326	+	NM_001048199 TSC_hg19_v1_chr1_+_28832500	146154	+	NM_001127350|MED18|54797|mediator complex subunit 18##NM_017638|MED18|54797|mediator complex subunit 18##AK296130|MED18|54797|mediator complex subunit 18##AK000052|MED18|54797|mediator complex subunit 18##AB107222|MED18|54797|mediator complex subunit 18##BC002694|MED18|54797|mediator complex subunit 18##NM_031459|SESN2|83667|sestrin 2##BC013304|SESN2|83667|sestrin 2##AY123223|SESN2|83667|sestrin 2##BC033719|SESN2|83667|sestrin 2##AL136551|SESN2|83667|sestrin 2##AK315710|SESN2|83667|sestrin 2##DQ892827|SESN2|83667|sestrin 2##DQ896073|SESN2|83667|sestrin 2##EU831582|SESN2|83667|sestrin 2##EU831667|SESN2|83667|sestrin 2##NM_016311|ATPIF1|93974|ATPase inhibitory factor 1##NM_178190|ATPIF1|93974|ATPase inhibitory factor 1##NM_178191|ATPIF1|93974|ATPase inhibitory factor 1##AK316600|ATPIF1|93974|ATPase inhibitory factor 1##BC009677|ATPIF1|93974|ATPase inhibitory factor 1##AK000934|ATPIF1|93974|ATPase inhibitory factor 1##AB029042|ATPIF1|93974|ATPase inhibitory factor 1##BT009849|ATPIF1|93974|ATPase inhibitory factor 1##CR457097|ATPIF1|93974|ATPase inhibitory factor 1##EU832478|ATPIF1|93974|ATPase inhibitory factor 1##EU832558|ATPIF1|93974|ATPase inhibitory factor 1##BC017562|ATPIF1|93974|ATPase inhibitory factor 1##BC004955|ATPIF1|93974|ATPase inhibitory factor 1##NM_001048183|PHACTR4|65979|phosphatase and actin regulator 4##CR749449|PHACTR4|65979|phosphatase and actin regulator 4##AK025436|PHACTR4|65979|phosphatase and actin regulator 4##BC029266|PHACTR4|65979|phosphatase and actin regulator 4##BC016152|PHACTR4|65979|phosphatase and actin regulator 4##BC068508|PHACTR4|65979|phosphatase and actin regulator 4##NM_023923|PHACTR4|65979|phosphatase and actin regulator 4##BC021247|PHACTR4|65979|phosphatase and actin regulator 4##NM_001048199|RCC1|1104|regulator of chromosome condensation 1	0.999204	CTCF.p2:11:0.999
chr12	56118544	56118643	reg1005135.p1	10.501	+	NM_001199771 NM_002905 TSC_hg19_v1_chr12_+_56114176 AK307157 DQ426887 AK293313 BC028298 U89717 U43559	-4390	+	BC130640 BC132795 TSC_hg19_v1_chr12_+_56109860 S82447 AB527695	-8709	+	BC066340 AK307141 TSC_hg19_v1_chr12_+_56109846 AK096656	-8754	+	BT007073 BT020137 BT020138 CR542096 DQ891248 DQ894433 AB529147 AF508304 TSC_hg19_v1_chr12_-_56122195	3593	-	S93788 X07982 TSC_hg19_v1_chr12_-_56122784 BC013017 M59907 M58485	4174	-	AK311893 TSC_hg19_v1_chr12_-_56122794	4200	-	NM_001199771|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##NM_002905|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##AK307157|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##DQ426887|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##AK293313|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##BC028298|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##U89717|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##U43559|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##BC130640|BLOC1S1|2647|biogenesis of lysosomal organelles complex-1, subunit 1##BC132795|BLOC1S1|2647|biogenesis of lysosomal organelles complex-1, subunit 1##S82447|BLOC1S1|2647|biogenesis of lysosomal organelles complex-1, subunit 1##BC066340|BLOC1S1|2647|biogenesis of lysosomal organelles complex-1, subunit 1##AK307141|BLOC1S1-RDH5|100528022|BLOC1S1-RDH5 readthrough##AK096656|BLOC1S1-RDH5|100528022|BLOC1S1-RDH5 readthrough##BT007073|CD63|967|CD63 molecule##BT020137|CD63|967|CD63 molecule##BT020138|CD63|967|CD63 molecule##CR542096|CD63|967|CD63 molecule##DQ891248|CD63|967|CD63 molecule##DQ894433|CD63|967|CD63 molecule##AF508304|CD63|967|CD63 molecule##S93788|CD63|967|CD63 molecule##X07982|CD63|967|CD63 molecule##BC013017|CD63|967|CD63 molecule##M59907|CD63|967|CD63 molecule##M58485|CD63|967|CD63 molecule##AK311893|CD63|967|CD63 molecule	0.0	
chr4	107423380	107423493	reg1010375.p1	10.501	+	NM_001195138	-134845	-	AK074305 NM_001163436	-185609	-	TSC_hg19_v1_chr4_+_107237727 U10117	-185706	+	NM_014421 AF177395	534016	-	BC011392 AF016496 CR457028 CU690750 BC040940 TSC_hg19_v1_chr4_-_108641372 BC050627 AF033026 AK292774 AK297981 Y10387 BC032513 AF105227 NM_005443	1217928	-	AK290344 NM_001136258 AF452717	1322331	+	NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like##AK074305|TBCK|93627|TBC1 domain containing kinase##NM_001163436|TBCK|93627|TBC1 domain containing kinase##U10117|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_014421|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##AF177395|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##BC011392|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF016496|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##CR457028|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC040940|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC050627|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF033026|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK292774|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK297981|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##Y10387|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC032513|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF105227|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##NM_005443|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK290344|SGMS2|166929|sphingomyelin synthase 2##NM_001136258|SGMS2|166929|sphingomyelin synthase 2##AF452717|SGMS2|166929|sphingomyelin synthase 2	0.989703	CTCF.p2:-6:0.990
chr9	35826373	35826526	reg1004268.p2	10.501	+	TSC_hg19_v1_chr9_-_35815040 NM_032593	-11394	-	TSC_hg19_v1_chr9_-_35815018 AK222582 AF356515 AY033094 AF356875 BC047737 AF085236	-11437	-	DQ890798 EU176503 BC019247 AK302313 NM_001039592 NM_172312 S83157 U12978	-14249	-	BC146808 BX648702 NM_001012446	2286	-	TSC_hg19_v1_chr9_+_35829262 NM_016446 BC043384 NM_001042589 AF188239	2794	+	TSC_hg19_v1_chr9_+_35829375 BC064951 NM_001042590 BC082765	3029	+	NM_032593|HINT2|84681|histidine triad nucleotide binding protein 2##AK222582|HINT2|84681|histidine triad nucleotide binding protein 2##AF356515|HINT2|84681|histidine triad nucleotide binding protein 2##AY033094|HINT2|84681|histidine triad nucleotide binding protein 2##AF356875|HINT2|84681|histidine triad nucleotide binding protein 2##BC047737|HINT2|84681|histidine triad nucleotide binding protein 2##AF085236|HINT2|84681|histidine triad nucleotide binding protein 2##DQ890798|SPAG8|26206|sperm associated antigen 8##EU176503|SPAG8|26206|sperm associated antigen 8##BC019247|SPAG8|26206|sperm associated antigen 8##AK302313|SPAG8|26206|sperm associated antigen 8##NM_001039592|SPAG8|26206|sperm associated antigen 8##NM_172312|SPAG8|26206|sperm associated antigen 8##S83157|SPAG8|26206|sperm associated antigen 8##U12978|SPAG8|26206|sperm associated antigen 8##BC146808|C9orf128|392307|chromosome 9 open reading frame 128##BX648702|C9orf128|392307|chromosome 9 open reading frame 128##NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128##NM_016446|TMEM8B|51754|transmembrane protein 8B##BC043384|TMEM8B|51754|transmembrane protein 8B##NM_001042589|TMEM8B|51754|transmembrane protein 8B##AF188239|TMEM8B|51754|transmembrane protein 8B##BC064951|TMEM8B|51754|transmembrane protein 8B##NM_001042590|TMEM8B|51754|transmembrane protein 8B##BC082765|TMEM8B|51754|transmembrane protein 8B	0.647147	CTCF.p2:-16:0.647
chr2	182942488	182942608	reg1011830.p1	10.500	+	NM_001080545 AK129898 AF494535 BX647581 BC017943	-91899	+	TSC_hg19_v1_chr2_+_182756689 BC052581 BC064499 BC028706 AK291745 BX647257 AB116937 AB385517 BX647967 AK304238 BX648888	-185755	+	TSC_hg19_v1_chr2_+_182756494 NM_001130445 NM_006751 AK093143 AX747951 AB067514	-186017	+	AK295657 AB384753 DQ892369 DQ893372 DQ895578 DQ896694 AF110237 NM_005019 BC022480 AF110240 AF110236 NM_001003683 U40370 AK294239	444736	-	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	638526	+	TSC_hg19_v1_chr2_+_183582683 BC107425 AF314529 AY089971 HQ258514 HQ258651 AL832646 AK027450	640199	+	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC052581|SSFA2|6744|sperm specific antigen 2##BC064499|SSFA2|6744|sperm specific antigen 2##BC028706|SSFA2|6744|sperm specific antigen 2##AK291745|SSFA2|6744|sperm specific antigen 2##BX647257|SSFA2|6744|sperm specific antigen 2##AB116937|SSFA2|6744|sperm specific antigen 2##BX647967|SSFA2|6744|sperm specific antigen 2##AK304238|SSFA2|6744|sperm specific antigen 2##BX648888|SSFA2|6744|sperm specific antigen 2##NM_001130445|SSFA2|6744|sperm specific antigen 2##NM_006751|SSFA2|6744|sperm specific antigen 2##AB067514|SSFA2|6744|sperm specific antigen 2##AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC107425|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF314529|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY089971|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258514|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258651|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832646|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027450|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	0.962879	CTCF.p2:17:0.963
chr3	114936533	114936668	reg1012234.p1	10.500	+	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	-70486	-	BC090936 NM_001164343	-146360	-	AK225788 NM_001164344 NM_001164345	-458480	-	NM_001130064 NM_002045	405550	+	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	405819	+	AK315286 TSC_hg19_v1_chr3_-_116164338	1227731	-	BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20##AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AK315286|LSAMP|4045|limbic system-associated membrane protein	0.441402	CTCF.p2:-1:0.441
chrX	122967345	122967455	reg1007715.p1	10.500	+	TSC_hg19_v1_chrX_-_122866897 NM_001081550	-100503	-	TSC_hg19_v1_chrX_-_122866885 AK001758	-100517	-	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	-649160	+	TSC_hg19_v1_chrX_+_122993844 AK313883 NM_001204401 NM_001167 AK309704 U32974 BC032729	26542	+	TSC_hg19_v1_chrX_+_123094397 NM_001042749 AK098737 BX640970 AK298633 AK313559	127124	+	NM_001042750 NM_001042751 NM_006603 TSC_hg19_v1_chrX_+_123095573 AL831939 BX641002 CR749433 BX641003	128173	+	NM_001081550|THOC2|57187|THO complex 2##AK001758|THOC2|57187|THO complex 2##NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##AK313883|XIAP|331|X-linked inhibitor of apoptosis##NM_001204401|XIAP|331|X-linked inhibitor of apoptosis##NM_001167|XIAP|331|X-linked inhibitor of apoptosis##AK309704|XIAP|331|X-linked inhibitor of apoptosis##U32974|XIAP|331|X-linked inhibitor of apoptosis##BC032729|XIAP|331|X-linked inhibitor of apoptosis##NM_001042749|STAG2|10735|stromal antigen 2##AK098737|STAG2|10735|stromal antigen 2##BX640970|STAG2|10735|stromal antigen 2##AK298633|STAG2|10735|stromal antigen 2##AK313559|STAG2|10735|stromal antigen 2##NM_001042750|STAG2|10735|stromal antigen 2##NM_001042751|STAG2|10735|stromal antigen 2##NM_006603|STAG2|10735|stromal antigen 2##AL831939|STAG2|10735|stromal antigen 2##BX641002|STAG2|10735|stromal antigen 2##CR749433|STAG2|10735|stromal antigen 2##BX641003|STAG2|10735|stromal antigen 2	0.9923	CTCF.p2:-6:0.992
chr1	10490388	10490499	reg1010617.p2	10.499	+	AF521016 NM_198544 NM_199006 NM_199294	-285	+	NM_002631 TSC_hg19_v1_chr1_+_10459125 AK300952 AK290404 AK296889 AK303898 AK304423 BC000368 U30255 AB463169 AK298830	-31314	+	TSC_hg19_v1_chr1_+_10270680 AK308121 NM_015074 NM_183416 AF257176 AY139835	-219672	+	TSC_hg19_v1_chr1_+_10490434 AF516753 BC029430	50	+	TSC_hg19_v1_chr1_+_10490829 NM_001243768	374	+	AY358561 NM_001302	19332	+	AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1##NM_002631|PGD|5226|phosphogluconate dehydrogenase##AK300952|PGD|5226|phosphogluconate dehydrogenase##AK290404|PGD|5226|phosphogluconate dehydrogenase##AK296889|PGD|5226|phosphogluconate dehydrogenase##AK303898|PGD|5226|phosphogluconate dehydrogenase##AK304423|PGD|5226|phosphogluconate dehydrogenase##BC000368|PGD|5226|phosphogluconate dehydrogenase##U30255|PGD|5226|phosphogluconate dehydrogenase##AK298830|PGD|5226|phosphogluconate dehydrogenase##AK308121|KIF1B|23095|kinesin family member 1B##NM_015074|KIF1B|23095|kinesin family member 1B##NM_183416|KIF1B|23095|kinesin family member 1B##AF257176|KIF1B|23095|kinesin family member 1B##AY139835|KIF1B|23095|kinesin family member 1B##AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough##BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1##NM_001243768|APITD1-CORT|100526739|APITD1-CORT readthrough##AY358561|CORT|1325|cortistatin##NM_001302|CORT|1325|cortistatin	0.927686	CTCF.p2:-12:0.928
chr8	29034614	29034740	reg1010669.p1	10.499	+	TSC_hg19_v1_chr8_+_28748135 AY522342 DQ269478 BC069242 NM_024567	-286550	+	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	-286760	+	NM_001145159 NM_018250	-286980	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	85937	-	AL137704 NM_057158	171644	-	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	173393	-	AY522342|HMBOX1|79618|homeobox containing 1##DQ269478|HMBOX1|79618|homeobox containing 1##BC069242|HMBOX1|79618|homeobox containing 1##NM_024567|HMBOX1|79618|homeobox containing 1##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4	0.984732	CTCF.p2:7:0.985
chr11	16957511	16957613	reg1010177.p1	10.498	+	TSC_hg19_v1_chr11_+_16760204 BC103747 AK315382 BC007103 BC016352 BC020937 U51678 CR456882 CU675547 AK124165	-197278	+	NM_014267 TSC_hg19_v1_chr11_+_16760165	-197402	+	AF309034 NM_033326	-459637	-	TSC_hg19_v1_chr11_-_16996590 D28414	39014	-	AB385210 TSC_hg19_v1_chr11_-_17035962 BC071599 NM_175058	78403	-	X79239 AB528349 CU688732 TSC_hg19_v1_chr11_-_17099216 DQ891107 DQ894288 BC000475 BC029732 BC100032 BC006772 AK312060 BC066322 D28429 L01124 NM_001017	141677	-	BC103747|C11orf58|10944|chromosome 11 open reading frame 58##AK315382|C11orf58|10944|chromosome 11 open reading frame 58##BC007103|C11orf58|10944|chromosome 11 open reading frame 58##BC016352|C11orf58|10944|chromosome 11 open reading frame 58##BC020937|C11orf58|10944|chromosome 11 open reading frame 58##U51678|C11orf58|10944|chromosome 11 open reading frame 58##CR456882|C11orf58|10944|chromosome 11 open reading frame 58##NM_014267|C11orf58|10944|chromosome 11 open reading frame 58##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6##D28414|RPL36A|6173|ribosomal protein L36a##BC071599|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##NM_175058|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##X79239|RPS13|6207|ribosomal protein S13##DQ891107|RPS13|6207|ribosomal protein S13##DQ894288|RPS13|6207|ribosomal protein S13##BC000475|RPS13|6207|ribosomal protein S13##BC029732|RPS13|6207|ribosomal protein S13##BC100032|RPS13|6207|ribosomal protein S13##BC006772|RPS13|6207|ribosomal protein S13##AK312060|RPS13|6207|ribosomal protein S13##BC066322|RPS13|6207|ribosomal protein S13##L01124|RPS13|6207|ribosomal protein S13##NM_001017|RPS13|6207|ribosomal protein S13	0.121904	
chr12	56600411	56600560	reg1009878.p1	10.498	+	TSC_hg19_v1_chr12_-_56583357 AB209006 NM_001130420 NM_003075 NM_139067	-17138	-	AB384911 BT009924 EU176256 AK315153 TSC_hg19_v1_chr12_-_56583268 BC026222 AK293896 AB209293 U66616 BC013045	-17213	-	TSC_hg19_v1_chr12_-_56563972 BC009067	-36508	-	NM_001242826 BC011626 BC095418 TSC_hg19_v1_chr12_-_56615651 BC036267	15087	-	TSC_hg19_v1_chr12_-_56615718 BC024284 AK300752 NM_005785 NM_194358 AK314811 AK304576 NM_194359	15240	-	TSC_hg19_v1_chr12_+_56618125 NM_024068	17638	+	AB209006|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_001130420|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_003075|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_139067|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##BT009924|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##EU176256|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##AK315153|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##BC026222|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##AK293896|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##AB209293|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##U66616|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##BC013045|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##BC009067|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_001242826|RNF41|10193|ring finger protein 41##BC011626|RNF41|10193|ring finger protein 41##BC095418|RNF41|10193|ring finger protein 41##BC036267|RNF41|10193|ring finger protein 41##BC024284|RNF41|10193|ring finger protein 41##AK300752|RNF41|10193|ring finger protein 41##NM_005785|RNF41|10193|ring finger protein 41##NM_194358|RNF41|10193|ring finger protein 41##AK314811|RNF41|10193|ring finger protein 41##AK304576|RNF41|10193|ring finger protein 41##NM_194359|RNF41|10193|ring finger protein 41##NM_024068|OBFC2B|79035|oligonucleotide/oligosaccharide-binding fold containing 2B	0.16228	
chr1	47902235	47902370	reg1011146.p2	10.498	+	AF042832 NM_004474	-614	+	AF275722 NM_012186	-20559	+	TSC_hg19_v1_chr1_+_47799646 AF259961	-102661	+	NM_001194986	560259	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	786090	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	1035376	-	AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##NM_001194986|LOC388630|388630|UPF0632 protein A##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6	0.0	
chr2	60777561	60777688	reg1009407.p2	10.498	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2309142	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-2503636	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-2503870	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	2898	-	AF080216 TSC_hg19_v1_chr2_-_60780784	3154	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	205860	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.078097	
chr6	138296872	138297016	reg1010674.p2	10.497	+	TSC_hg19_v1_chr6_-_138189314 AK124173	-107594	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-108407	+	BC051352 AK096362 NM_175747	-481419	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	131624	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	186192	+	BC069109 NM_021635 AF189269 AF189270	242682	-	AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1	0.984717	CTCF.p2:31:0.985
chr12	111882839	111883019	reg1010421.p2	10.496	+	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	-39180	+	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	-76019	-	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	-76083	-	AK126309 TSC_hg19_v1_chr12_-_111893987	10994	-	TSC_hg19_v1_chr12_-_112036257 AK095017	153346	-	TSC_hg19_v1_chr12_-_112036908 AK307803	153984	-	AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##AK095017|ATXN2|6311|ataxin 2##AK307803|ATXN2|6311|ataxin 2	0.0	
chr14	24028801	24028923	reg1010856.p1	10.496	+	AK310524 TSC_hg19_v1_chr14_-_24025427	-3424	-	TSC_hg19_v1_chr14_+_24025262 NM_001126339 NM_024328 BX161435 AK098604 AK057691 BC002984	-3520	+	BC131533 TSC_hg19_v1_chr14_-_24020861 AB028979 NM_033400	-8042	-	BX247963 BC051833 TSC_hg19_v1_chr14_-_24036719 AK304682 AK310451	7780	-	TSC_hg19_v1_chr14_-_24036998 BX161425 AB015318 AK307696 AK309103	8139	-	AF068706 NM_003917	8410	-	NM_001126339|THTPA|79178|thiamine triphosphatase##NM_024328|THTPA|79178|thiamine triphosphatase##BX161435|THTPA|79178|thiamine triphosphatase##AK098604|THTPA|79178|thiamine triphosphatase##AK057691|THTPA|79178|thiamine triphosphatase##BC002984|THTPA|79178|thiamine triphosphatase##BC131533|ZFHX2|85446|zinc finger homeobox 2##AB028979|ZFHX2|85446|zinc finger homeobox 2##NM_033400|ZFHX2|85446|zinc finger homeobox 2##BX247963|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##BC051833|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK304682|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK310451|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##BX161425|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AB015318|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK307696|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK309103|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AF068706|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##NM_003917|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	0.999171	CTCF.p2:6:0.999
chr5	175843585	175843726	reg1010953.p1	10.496	+	TSC_hg19_v1_chr5_-_175843538 AK300200 NM_001834 NM_007097	-120	-	CU675411 AB528704 BT007028 CR536577 TSC_hg19_v1_chr5_-_175843440 BC006457 M20470 BC006332	-214	-	AF151019 TSC_hg19_v1_chr5_-_175815981	-27701	-	NM_014613 TSC_hg19_v1_chr5_+_175875355	31706	+	TSC_hg19_v1_chr5_+_175875374 BC001069	31720	+	TSC_hg19_v1_chr5_+_175875385 AK304346	31727	+	AK300200|CLTB|1212|clathrin, light chain B##NM_001834|CLTB|1212|clathrin, light chain B##NM_007097|CLTB|1212|clathrin, light chain B##BT007028|CLTB|1212|clathrin, light chain B##CR536577|CLTB|1212|clathrin, light chain B##BC006457|CLTB|1212|clathrin, light chain B##M20470|CLTB|1212|clathrin, light chain B##BC006332|CLTB|1212|clathrin, light chain B##AF151019|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##NM_014613|FAF2|23197|Fas associated factor family member 2##BC001069|FAF2|23197|Fas associated factor family member 2##AK304346|FAF2|23197|Fas associated factor family member 2	0.168107	
chr6	158635325	158635453	reg1010746.p2	10.496	+	NM_207118 TSC_hg19_v1_chr6_+_158589381 AK055106 BC056906 AJ634743	-45998	+	TSC_hg19_v1_chr6_-_158589295 AK027823 BC060795 NM_032861	-46089	-	BC048335 BC001705 BC028594 BX648104 TSC_hg19_v1_chr6_-_158589279	-46149	-	AB037818 AF219946 AF288480 BC152476 NM_001007466 NM_020245 AK311671	98308	+	AK304056 TSC_hg19_v1_chr6_+_158734584	99141	+	TSC_hg19_v1_chr6_+_158734935 AF087973	99530	+	NM_207118|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AK055106|GTF2H5|404672|general transcription factor IIH, polypeptide 5##BC056906|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AJ634743|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AK027823|SERAC1|84947|serine active site containing 1##BC060795|SERAC1|84947|serine active site containing 1##NM_032861|SERAC1|84947|serine active site containing 1##BC048335|SERAC1|84947|serine active site containing 1##BC001705|SERAC1|84947|serine active site containing 1##BC028594|SERAC1|84947|serine active site containing 1##BX648104|SERAC1|84947|serine active site containing 1##AB037818|TULP4|56995|tubby like protein 4##AF219946|TULP4|56995|tubby like protein 4##AF288480|TULP4|56995|tubby like protein 4##BC152476|TULP4|56995|tubby like protein 4##NM_001007466|TULP4|56995|tubby like protein 4##NM_020245|TULP4|56995|tubby like protein 4##AK304056|TULP4|56995|tubby like protein 4	0.089893	
chr6	40995811	40995962	reg1009744.p1	10.496	+	BC142616 AB033072 NM_020737 AK291474	-440742	-	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-1093672	-	AB527188 AJ224328 NM_005943	-1100501	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	11063	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	14460	+	AK223461 AK308197 AK310006 AK313288 NM_006789 BC047767 AF161698 BC069688 BC069764 AK300689	25113	+	BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2##AK223461|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK308197|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK310006|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK313288|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##NM_006789|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC047767|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AF161698|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069688|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069764|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK300689|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2	0.992287	CTCF.p2:9:0.992
chr7	142340151	142340303	reg1010380.p1	10.496	+	AY358487 BC035384 AK122940 NM_001001317	-382366	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-528688	+	AF016833 NM_004668 BC120872	-644535	+	NM_001190487	33903	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	117099	+	M12426 TSC_hg19_v1_chr7_+_142495248	154968	+	AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	0.978662	CTCF.p2:-9:0.979
chr3	138655145	138655280	reg1010035.p1	10.495	+	AB384841 BC114432 NM_006219 S67334	-177028	-	AK001444 NM_018147	-327294	+	NM_001033030 NM_001033031 NM_001033032 TSC_hg19_v1_chr3_+_138327638 BC012478	-327596	+	BC062549 NM_023067	10769	-	AK125319 NM_001040061	10863	+	NM_001134659	69897	-	BC114432|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##NM_006219|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##S67334|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##AK001444|FAIM|55179|Fas apoptotic inhibitory molecule##NM_018147|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033030|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033031|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033032|FAIM|55179|Fas apoptotic inhibitory molecule##BC012478|FAIM|55179|Fas apoptotic inhibitory molecule##BC062549|FOXL2|668|forkhead box L2##NM_023067|FOXL2|668|forkhead box L2##AK125319|C3orf72|401089|chromosome 3 open reading frame 72##NM_001040061|C3orf72|401089|chromosome 3 open reading frame 72##NM_001134659|PRR23A|729627|proline rich 23A	0.999061	CTCF.p2:15:0.999
chr12	41670989	41671104	reg1010151.p2	10.494	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	-88838	+	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	-584764	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	-1052187	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	160541	+	TSC_hg19_v1_chr12_-_42538503 AK125141 NM_001099650 NM_173601 BC030023	867533	-	CU691510 EU446625 EU446756 AB527838 TSC_hg19_v1_chr12_-_42632024 BC037777 AK127531 AK291355 AK296191 AK294260 NM_001190977	960989	-	NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4##AK125141|GXYLT1|283464|glucoside xylosyltransferase 1##NM_001099650|GXYLT1|283464|glucoside xylosyltransferase 1##NM_173601|GXYLT1|283464|glucoside xylosyltransferase 1##BC030023|GXYLT1|283464|glucoside xylosyltransferase 1##EU446625|YAF2|10138|YY1 associated factor 2##EU446756|YAF2|10138|YY1 associated factor 2##BC037777|YAF2|10138|YY1 associated factor 2##AK127531|YAF2|10138|YY1 associated factor 2##AK291355|YAF2|10138|YY1 associated factor 2##AK296191|YAF2|10138|YY1 associated factor 2##AK294260|YAF2|10138|YY1 associated factor 2##NM_001190977|YAF2|10138|YY1 associated factor 2	0.989871	CTCF.p2:-21:0.990
chr20	35437067	35437178	reg1005650.p1	10.494	+	AK057056 TSC_hg19_v1_chr20_-_35407842	-29346	-	TSC_hg19_v1_chr20_-_35402167 BC035821 AK093031 AX747868 AK290738 NM_001145316 NM_024918 AK301671 AK301840 BC058899 AK023408 BC026011 NM_001145315 NM_001145317 NM_001145318	-34937	-	TSC_hg19_v1_chr20_-_35374542 NM_022477 NM_032013	-62570	-	TSC_hg19_v1_chr20_-_35444558 AK131491	7498	-	AK126630 NM_199181	51153	-	TSC_hg19_v1_chr20_-_35492072 NM_080627	55012	-	AK057056|KIAA0889|140710|KIAA0889##BC035821|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK093031|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK290738|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145316|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_024918|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301671|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301840|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC058899|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK023408|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC026011|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145315|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145317|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145318|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_022477|NDRG3|57446|NDRG family member 3##NM_032013|NDRG3|57446|NDRG family member 3##AK131491|KIAA0889|140710|KIAA0889##AK126630|KIAA0889|140710|KIAA0889##NM_199181|KIAA0889|140710|KIAA0889##NM_080627|KIAA0889|140710|KIAA0889	0.998885	CTCF.p2:7:0.999
chr12	58197189	58197329	reg1012661.p1	10.493	+	NM_001172695 NM_001172696 NM_001172697 NM_005726 TSC_hg19_v1_chr12_+_58176558 AK304621 AK313453 BC022862 AK295323 AK308981 BC093068 AF110399	-20700	+	TSC_hg19_v1_chr12_+_58166438 AK024983 AK292276 AL050100 AB528834 AM393242 AM393762 CU677623	-30788	+	TSC_hg19_v1_chr12_+_58166407 BC099841 BC103501	-30853	+	BC111730 AF041449 NM_006576	12586	-	AB385539 AY279531 CU688100 TSC_hg19_v1_chr12_-_58240364	43034	-	TSC_hg19_v1_chr12_-_58240463 BC065920 AF022231	43196	-	NM_001172695|TSFM|10102|Ts translation elongation factor, mitochondrial##NM_001172696|TSFM|10102|Ts translation elongation factor, mitochondrial##NM_001172697|TSFM|10102|Ts translation elongation factor, mitochondrial##NM_005726|TSFM|10102|Ts translation elongation factor, mitochondrial##AK304621|TSFM|10102|Ts translation elongation factor, mitochondrial##AK313453|TSFM|10102|Ts translation elongation factor, mitochondrial##BC022862|TSFM|10102|Ts translation elongation factor, mitochondrial##AK295323|TSFM|10102|Ts translation elongation factor, mitochondrial##AK308981|TSFM|10102|Ts translation elongation factor, mitochondrial##BC093068|TSFM|10102|Ts translation elongation factor, mitochondrial##AF110399|TSFM|10102|Ts translation elongation factor, mitochondrial##AK024983|METTL21B|25895|methyltransferase like 21B##AK292276|METTL21B|25895|methyltransferase like 21B##AL050100|METTL21B|25895|methyltransferase like 21B##AM393242|METTL21B|25895|methyltransferase like 21B##AM393762|METTL21B|25895|methyltransferase like 21B##BC099841|METTL21B|25895|methyltransferase like 21B##BC103501|METTL21B|25895|methyltransferase like 21B##BC111730|AVIL|10677|advillin##AF041449|AVIL|10677|advillin##NM_006576|AVIL|10677|advillin##AY279531|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##BC065920|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##AF022231|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	0.027567	
chr14	94437043	94437196	reg1011616.p1	10.493	+	AB056723 NM_016150	-13353	-	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	-43411	+	NM_001207071 NM_138344 AK093387 AX748092	-51871	+	AK303686 TSC_hg19_v1_chr14_-_94442905	5789	-	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	5957	-	TSC_hg19_v1_chr14_+_94492685 BC009615 BC068058 NM_023112	55584	+	AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2##BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	0.989395	CTCF.p2:1:0.989
chr2	198642649	198642772	reg1009494.p2	10.493	+	NM_138395 TSC_hg19_v1_chr2_+_198570134 AB107013 BC026361 BC126294 AK098121 AK301252 BC009115 HQ258326	-72581	+	AK055136 NM_144629 BC111069 TSC_hg19_v1_chr2_-_198540765	-102035	-	NM_001204094	-261689	+	AF272858 BC033674 AK098824 AK058099 NM_033030	7330	-	NM_197970 AK302817	8276	-	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	26660	+	NM_138395|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AB107013|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC026361|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC126294|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK098121|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK301252|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC009115|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##HQ258326|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK055136|RFTN2|130132|raftlin family member 2##NM_144629|RFTN2|130132|raftlin family member 2##BC111069|RFTN2|130132|raftlin family member 2##NM_001204094|MOB4|25843|MOB family member 4, phocein##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1	0.01471	
chr3	186334943	186335059	reg1009825.p2	10.493	+	TSC_hg19_v1_chr3_+_186330872 BC048198 BC052590 M16961 AB527879 CU690918 D67012	-4057	+	TSC_hg19_v1_chr3_+_186330850 NM_001622 AK298447 AK312969 AK292751	-4152	+	AK303754 TSC_hg19_v1_chr3_+_186330817	-4233	+	AF534529 AJ242928 NM_014375 AB017551 BC069670 BC069820 BC114616 BC074734 AY373820 AY373821 AK309647	23264	+	AK313381 BC069574 NM_000412 BC150591	48783	+	NM_000893 NM_001102416 NM_001166451 AK303768 AK298440 AK315230 AK290839 BC060039 TSC_hg19_v1_chr3_+_186435263 K02566 BC026253 CU687392	100212	+	BC048198|AHSG|197|alpha-2-HS-glycoprotein##BC052590|AHSG|197|alpha-2-HS-glycoprotein##M16961|AHSG|197|alpha-2-HS-glycoprotein##D67012|AHSG|197|alpha-2-HS-glycoprotein##NM_001622|AHSG|197|alpha-2-HS-glycoprotein##AK298447|AHSG|197|alpha-2-HS-glycoprotein##AK312969|AHSG|197|alpha-2-HS-glycoprotein##AK292751|AHSG|197|alpha-2-HS-glycoprotein##AK303754|AHSG|197|alpha-2-HS-glycoprotein##AF534529|FETUB|26998|fetuin B##AJ242928|FETUB|26998|fetuin B##NM_014375|FETUB|26998|fetuin B##AB017551|FETUB|26998|fetuin B##BC069670|FETUB|26998|fetuin B##BC069820|FETUB|26998|fetuin B##BC114616|FETUB|26998|fetuin B##BC074734|FETUB|26998|fetuin B##AY373820|FETUB|26998|fetuin B##AY373821|FETUB|26998|fetuin B##AK309647|FETUB|26998|fetuin B##AK313381|HRG|3273|histidine-rich glycoprotein##BC069574|HRG|3273|histidine-rich glycoprotein##NM_000412|HRG|3273|histidine-rich glycoprotein##BC150591|HRG|3273|histidine-rich glycoprotein##NM_000893|KNG1|3827|kininogen 1##NM_001102416|KNG1|3827|kininogen 1##NM_001166451|KNG1|3827|kininogen 1##AK303768|KNG1|3827|kininogen 1##AK298440|KNG1|3827|kininogen 1##AK315230|KNG1|3827|kininogen 1##AK290839|KNG1|3827|kininogen 1##BC060039|KNG1|3827|kininogen 1##K02566|KNG1|3827|kininogen 1##BC026253|KNG1|3827|kininogen 1	0.999556	CTCF.p2:17:1.000
chr6	153345652	153345803	reg1012141.p1	10.493	+	TSC_hg19_v1_chr6_-_153323873 AK297671 NM_001114184 NM_019041	-21830	-	TSC_hg19_v1_chr6_-_153323849 AK095240	-21869	-	TSC_hg19_v1_chr6_-_153323845 BC105973 BC011873	-21884	-	BC013117 NM_012419 AF202257 TSC_hg19_v1_chr6_-_153452453	106693	-	AB055767 TSC_hg19_v1_chr6_-_153603892	258164	-	DQ680044 NM_001145279 NM_001145280 EU340241 EU340242 EU340243 NM_001145281	985905	+	AK297671|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_001114184|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_019041|MTRF1L|54516|mitochondrial translational release factor 1-like##AK095240|MTRF1L|54516|mitochondrial translational release factor 1-like##BC105973|MTRF1L|54516|mitochondrial translational release factor 1-like##BC011873|MTRF1L|54516|mitochondrial translational release factor 1-like##BC013117|RGS17|26575|regulator of G-protein signaling 17##NM_012419|RGS17|26575|regulator of G-protein signaling 17##AF202257|RGS17|26575|regulator of G-protein signaling 17##DQ680044|OPRM1|4988|opioid receptor, mu 1##NM_001145279|OPRM1|4988|opioid receptor, mu 1##NM_001145280|OPRM1|4988|opioid receptor, mu 1##EU340241|OPRM1|4988|opioid receptor, mu 1##EU340242|OPRM1|4988|opioid receptor, mu 1##EU340243|OPRM1|4988|opioid receptor, mu 1##NM_001145281|OPRM1|4988|opioid receptor, mu 1	0.99979	CTCF.p2:10:1.000
chr6	6495070	6495208	reg1012395.p1	10.493	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-174229	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-174254	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-487442	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	93811	+	BC039678 TSC_hg19_v1_chr6_+_6725205	230022	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	612687	+	NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1	0.02017	
chrX	15486197	15486343	reg1011543.p1	10.493	+	D89630 AJ000185 AX740237 BC027948 AK313173 AK223160 NM_004469	-83769	-	NM_002641 NM_020473 TSC_hg19_v1_chrX_-_15353680	-132580	-	AK303538 TSC_hg19_v1_chrX_-_15353667	-132602	-	BC002517 TSC_hg19_v1_chrX_-_15511423 AK309656 Y07868 Y07867	25150	-	NM_001018109 NM_003662	25440	-	NM_203281 AK291824 AK313568 X83107	32699	+	D89630|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##AJ000185|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##BC027948|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##AK313173|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##AK223160|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##NM_004469|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##NM_002641|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##NM_020473|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##AK303538|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##BC002517|PIR|8544|pirin (iron-binding nuclear protein)##AK309656|PIR|8544|pirin (iron-binding nuclear protein)##Y07868|PIR|8544|pirin (iron-binding nuclear protein)##Y07867|PIR|8544|pirin (iron-binding nuclear protein)##NM_001018109|PIR|8544|pirin (iron-binding nuclear protein)##NM_003662|PIR|8544|pirin (iron-binding nuclear protein)##NM_203281|BMX|660|BMX non-receptor tyrosine kinase##AK291824|BMX|660|BMX non-receptor tyrosine kinase##AK313568|BMX|660|BMX non-receptor tyrosine kinase##X83107|BMX|660|BMX non-receptor tyrosine kinase	0.425295	CTCF.p2:15:0.425
chr15	79299565	79299710	reg1011866.p1	10.492	+	NM_153815 S62035	-1636	-	TSC_hg19_v1_chr15_-_79237389 AL110099 BC002479 BC018821 AK309491 AK314698 D28436 AK130158 NM_004390	-62238	-	TSC_hg19_v1_chr15_-_79237350 AF426247 AF426248 CR456881 CU677980 DQ890683 DQ893772 AK295583 X16832	-62302	-	L26584 CU691844 AB385192 TSC_hg19_v1_chr15_-_79382954	83262	-	AK290135 TSC_hg19_v1_chr15_-_79383114 BC040275 NM_001145648 NM_002891	83511	-	AK127037 NM_001146341	275508	+	NM_153815|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##S62035|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AL110099|CTSH|1512|cathepsin H##BC002479|CTSH|1512|cathepsin H##BC018821|CTSH|1512|cathepsin H##AK309491|CTSH|1512|cathepsin H##AK314698|CTSH|1512|cathepsin H##D28436|CTSH|1512|cathepsin H##AK130158|CTSH|1512|cathepsin H##NM_004390|CTSH|1512|cathepsin H##AF426247|CTSH|1512|cathepsin H##AF426248|CTSH|1512|cathepsin H##CR456881|CTSH|1512|cathepsin H##DQ890683|CTSH|1512|cathepsin H##DQ893772|CTSH|1512|cathepsin H##X16832|CTSH|1512|cathepsin H##L26584|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK290135|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##BC040275|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_001145648|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_002891|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK127037|ANKRD34C|390616|ankyrin repeat domain 34C##NM_001146341|ANKRD34C|390616|ankyrin repeat domain 34C	0.944644	CTCF.p2:18:0.920
chr19	58249853	58249956	reg1010182.p1	10.492	+	EU446533 BC025728 TSC_hg19_v1_chr19_-_58239010 AK027159 AK310074 AK293680 AK091421 AK225665 NM_024833	-10949	-	AB095924 BC152404 BC152426 BC152561 TSC_hg19_v1_chr19_-_58220573 AK092261 AX747437 NM_001085384	-29348	-	AK307670 TSC_hg19_v1_chr19_+_58193344 NM_138347 BX538151 AK300465 AK091273 AX746889 BC005868 BC041615 AB527717 CU692008	-56447	+	TSC_hg19_v1_chr19_+_58258182 AK299680 NM_173632	8268	+	TSC_hg19_v1_chr19_+_58258208 BX957217 CR749390 CR936802 AK055448	8308	+	AK302151 TSC_hg19_v1_chr19_+_58281007 NM_001077426 NM_001204814 NM_017652 AK095993 BC027922 AK000077 AB074270	31113	+	EU446533|ZNF671|79891|zinc finger protein 671##BC025728|ZNF671|79891|zinc finger protein 671##AK027159|ZNF671|79891|zinc finger protein 671##AK310074|ZNF671|79891|zinc finger protein 671##AK293680|ZNF671|79891|zinc finger protein 671##AK091421|ZNF671|79891|zinc finger protein 671##AK225665|ZNF671|79891|zinc finger protein 671##NM_024833|ZNF671|79891|zinc finger protein 671##AB095924|ZNF154|7710|zinc finger protein 154##BC152404|ZNF154|7710|zinc finger protein 154##BC152426|ZNF154|7710|zinc finger protein 154##BC152561|ZNF154|7710|zinc finger protein 154##AK092261|ZNF154|7710|zinc finger protein 154##NM_001085384|ZNF154|7710|zinc finger protein 154##AK307670|ZNF551|90233|zinc finger protein 551##NM_138347|ZNF551|90233|zinc finger protein 551##BX538151|ZNF551|90233|zinc finger protein 551##AK300465|ZNF551|90233|zinc finger protein 551##AK091273|ZNF551|90233|zinc finger protein 551##BC005868|ZNF551|90233|zinc finger protein 551##AK299680|ZNF776|284309|zinc finger protein 776##NM_173632|ZNF776|284309|zinc finger protein 776##BX957217|ZNF776|284309|zinc finger protein 776##CR749390|ZNF776|284309|zinc finger protein 776##CR936802|ZNF776|284309|zinc finger protein 776##AK302151|ZNF586|54807|zinc finger protein 586##NM_001077426|ZNF586|54807|zinc finger protein 586##NM_001204814|ZNF586|54807|zinc finger protein 586##NM_017652|ZNF586|54807|zinc finger protein 586##AK095993|ZNF586|54807|zinc finger protein 586##BC027922|ZNF586|54807|zinc finger protein 586##AK000077|ZNF586|54807|zinc finger protein 586##AB074270|ZNF586|54807|zinc finger protein 586	0.830067	CTCF.p2:-14:0.830
chr3	118960427	118960570	reg1012915.p1	10.492	+	TSC_hg19_v1_chr3_-_118959726 AK001006 AK301688 AK314425 BX647468 CR749555 NM_003778 NM_212543	-761	-	AK303924 AK313787 NM_006952 AB002155	-68084	+	AK057421 NM_152539 BC130475 BC144197	-95502	+	TSC_hg19_v1_chr3_+_119013229 AB033030 NM_020754	52733	+	TSC_hg19_v1_chr3_+_119013513 AK293726 BC112163 BC112165 AB384581 HQ258543	53122	+	TSC_hg19_v1_chr3_-_119182462 BC003192 BC010070 BC021277 AK222950 AK223248 AK001764 NM_018266	221971	-	AK001006|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK301688|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK314425|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BX647468|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##CR749555|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_003778|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_212543|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK303924|UPK1B|7348|uroplakin 1B##AK313787|UPK1B|7348|uroplakin 1B##NM_006952|UPK1B|7348|uroplakin 1B##AB002155|UPK1B|7348|uroplakin 1B##AK057421|C3orf30|152405|chromosome 3 open reading frame 30##NM_152539|C3orf30|152405|chromosome 3 open reading frame 30##BC130475|C3orf30|152405|chromosome 3 open reading frame 30##BC144197|C3orf30|152405|chromosome 3 open reading frame 30##AB033030|ARHGAP31|57514|Rho GTPase activating protein 31##NM_020754|ARHGAP31|57514|Rho GTPase activating protein 31##AK293726|ARHGAP31|57514|Rho GTPase activating protein 31##BC112163|ARHGAP31|57514|Rho GTPase activating protein 31##BC112165|ARHGAP31|57514|Rho GTPase activating protein 31##HQ258543|ARHGAP31|57514|Rho GTPase activating protein 31##BC003192|TMEM39A|55254|transmembrane protein 39A##BC010070|TMEM39A|55254|transmembrane protein 39A##BC021277|TMEM39A|55254|transmembrane protein 39A##AK222950|TMEM39A|55254|transmembrane protein 39A##AK223248|TMEM39A|55254|transmembrane protein 39A##AK001764|TMEM39A|55254|transmembrane protein 39A##NM_018266|TMEM39A|55254|transmembrane protein 39A	0.912674	CTCF.p2:12:0.913
chr3	156190098	156190221	reg1009854.p1	10.492	+	NM_172159 BC043166 AK127240	-181349	+	NM_003471 AK292999 L39833 U16953 U17968	-329297	+	NM_172160 L47665 AK292693 AK303287	-351808	+	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	82722	-	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	82784	-	NM_015508	202045	+	NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_003471|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292999|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L39833|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U16953|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U17968|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_172160|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L47665|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292693|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK303287|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	0.52465	CTCF.p2:-12:0.525
chrX	1365753	1365887	reg1012913.p1	10.492	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	-34236	-	NM_000451 NM_006883 U89331	-780742	+	AK293506 NM_013239	-1018131	-	NM_001161529 NM_001161531 NM_001161532 NM_006140 NM_172245 NM_172246 NM_172249 AK293086 AK301395 BC071835 M64445 BC002635 AL833597 AK309630 L29348 L29349 U93096 X17648	21894	+	NM_001161530 NM_172247 M73832 DQ893104 DQ896376 AB590144 CU687176 DQ841258 X54935	35763	+	BC035407 NM_002183	89688	+	AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2##NM_000451|SHOX|6473|short stature homeobox##NM_006883|SHOX|6473|short stature homeobox##U89331|SHOX|6473|short stature homeobox##AK293506|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_013239|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_001161529|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161531|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161532|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_006140|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172245|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172246|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172249|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK293086|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK301395|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC071835|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M64445|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC002635|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AL833597|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK309630|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29348|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29349|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##U93096|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X17648|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161530|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172247|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M73832|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ893104|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ896376|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ841258|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X54935|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC035407|IL3RA|3563|interleukin 3 receptor, alpha (low affinity)##NM_002183|IL3RA|3563|interleukin 3 receptor, alpha (low affinity)	0.999879	CTCF.p2:11:1.000
chr11	63972131	63972265	reg1010887.p1	10.491	+	TSC_hg19_v1_chr11_+_63953675 BC002987 M86752 AK297319 AK225736	-18509	+	TSC_hg19_v1_chr11_+_63953652 AK291555	-18552	+	NM_006819 TSC_hg19_v1_chr11_+_63953613	-18593	+	TSC_hg19_v1_chr11_+_63974167 NM_031471 NM_178443	1966	+	TSC_hg19_v1_chr11_+_63974192 AY093951 AY093952 AK093719 AX748276 BC004347 BC013366 BC015584	2018	+	NM_001160393	21142	-	BC002987|STIP1|10963|stress-induced-phosphoprotein 1##M86752|STIP1|10963|stress-induced-phosphoprotein 1##AK297319|STIP1|10963|stress-induced-phosphoprotein 1##AK225736|STIP1|10963|stress-induced-phosphoprotein 1##AK291555|STIP1|10963|stress-induced-phosphoprotein 1##NM_006819|STIP1|10963|stress-induced-phosphoprotein 1##NM_031471|FERMT3|83706|fermitin family member 3##NM_178443|FERMT3|83706|fermitin family member 3##AY093951|FERMT3|83706|fermitin family member 3##AY093952|FERMT3|83706|fermitin family member 3##AK093719|FERMT3|83706|fermitin family member 3##BC004347|FERMT3|83706|fermitin family member 3##BC013366|FERMT3|83706|fermitin family member 3##BC015584|FERMT3|83706|fermitin family member 3##NM_001160393|TRPT1|83707|tRNA phosphotransferase 1	0.013249	
chr1	105190922	105191053	reg1011955.p1	10.489	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-898485	+	NM_001008221 AK292341	-898709	+	AK292341 NM_001008221	-951916	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	2408378	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	2491755	+	AB023193 TSC_hg19_v1_chr1_+_107683657	2492617	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.973077	CTCF.p2:-19:0.973
chr3	118603643	118603761	reg1007719.p1	10.489	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-2439329	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-2439371	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-3261283	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	149831	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	149981	-	AK097667 NM_152538 AK292387	261195	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.98569	CTCF.p2:3:0.986
chr5	76941393	76941554	reg1009622.p1	10.489	+	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	-6959	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	-7044	-	TSC_hg19_v1_chr5_-_76788333 AK001766 BC001807 NM_018268	-153158	-	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	130659	-	BC113045 CU691576 DQ894915 EU176289 TSC_hg19_v1_chr5_-_77590458 AK225908 U91931	648952	-	TSC_hg19_v1_chr5_-_77590488 AY623424 AK303300	649004	-	BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##EU446696|OTP|23440|orthopedia homeobox##AK001766|WDR41|55255|WD repeat domain 41##BC001807|WDR41|55255|WD repeat domain 41##NM_018268|WDR41|55255|WD repeat domain 41##BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A##DQ894915|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##EU176289|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK225908|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U91931|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AY623424|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK303300|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit	0.863817	CTCF.p2:20:0.864
chr1	168312061	168312191	reg1012216.p1	10.488	+	AJ010277 NM_005149 BC093664 BC093666 EU446671	-61824	+	TSC_hg19_v1_chr1_+_168195262 BC068098 CU686619	-116833	+	TSC_hg19_v1_chr1_+_168195254 AK290325 NM_199344	-116875	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	201091	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	233666	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	386303	-	AJ010277|TBX19|9095|T-box 19##NM_005149|TBX19|9095|T-box 19##BC093664|TBX19|9095|T-box 19##BC093666|TBX19|9095|T-box 19##EU446671|TBX19|9095|T-box 19##BC068098|SFT2D2|375035|SFT2 domain containing 2##AK290325|SFT2D2|375035|SFT2 domain containing 2##NM_199344|SFT2D2|375035|SFT2 domain containing 2##BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin	0.998852	CTCF.p2:-10:0.999
chr2	69064538	69064643	reg1008875.p1	10.488	+	BC032222 NM_001166276 NM_014882 AK311669 TSC_hg19_v1_chr2_+_69002068 BC039591 AK297157 AK298669 D29642	-62565	+	NM_001007231 NM_001166277 AK297056 TSC_hg19_v1_chr2_+_68962066 AK310742 AK290396	-102517	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	-191637	+	BC069080 BC101734 BC105063 AF101441 NM_014482	33985	-	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	115466	-	AB039886 AJ966789 NM_019617 AB590637 AY139184 AK098489 AY456961 BC059778 AY359050	137152	+	BC032222|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166276|ARHGAP25|9938|Rho GTPase activating protein 25##NM_014882|ARHGAP25|9938|Rho GTPase activating protein 25##AK311669|ARHGAP25|9938|Rho GTPase activating protein 25##BC039591|ARHGAP25|9938|Rho GTPase activating protein 25##AK297157|ARHGAP25|9938|Rho GTPase activating protein 25##AK298669|ARHGAP25|9938|Rho GTPase activating protein 25##D29642|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25##AK297056|ARHGAP25|9938|Rho GTPase activating protein 25##AK310742|ARHGAP25|9938|Rho GTPase activating protein 25##AK290396|ARHGAP25|9938|Rho GTPase activating protein 25##AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1##BC069080|BMP10|27302|bone morphogenetic protein 10##BC101734|BMP10|27302|bone morphogenetic protein 10##BC105063|BMP10|27302|bone morphogenetic protein 10##AF101441|BMP10|27302|bone morphogenetic protein 10##NM_014482|BMP10|27302|bone morphogenetic protein 10##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2##AB039886|GKN1|56287|gastrokine 1##AJ966789|GKN1|56287|gastrokine 1##NM_019617|GKN1|56287|gastrokine 1##AY139184|GKN1|56287|gastrokine 1##AK098489|GKN1|56287|gastrokine 1##AY456961|GKN1|56287|gastrokine 1##BC059778|GKN1|56287|gastrokine 1##AY359050|GKN1|56287|gastrokine 1	0.934737	CTCF.p2:-3:0.935
chr1	65152549	65152658	reg1010635.p1	10.487	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	-216085	+	BC029895 NM_152489	-483114	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	-912944	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	58196	+	TSC_hg19_v1_chr1_-_65432181 BC062431 BC009079 NM_002227	279411	-	TSC_hg19_v1_chr1_-_65432203 BC111401	279625	-	NM_020925|CACHD1|57685|cache domain containing 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2##BC062431|JAK1|3716|Janus kinase 1##BC009079|JAK1|3716|Janus kinase 1##NM_002227|JAK1|3716|Janus kinase 1##BC111401|JAK1|3716|Janus kinase 1	0.057939	
chr20	48462855	48462998	reg1010591.p1	10.487	+	CR749638 TSC_hg19_v1_chr20_+_48429436 AB023156 BC112213 AK295803 AK308328 AK131001 AK295665 AK310530 AK295822	-33508	+	NM_015266 TSC_hg19_v1_chr20_+_48429364 AK300318	-33618	+	TSC_hg19_v1_chr20_-_48330471 NM_004776	-132460	-	AK289644 NM_001135773	67349	-	BC009481 AB018300 TSC_hg19_v1_chr20_-_48532030 AK023229	69084	-	TSC_hg19_v1_chr20_-_48532056 U28164	69121	-	CR749638|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AB023156|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##BC112213|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295803|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK308328|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK131001|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295665|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK310530|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295822|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##NM_015266|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK300318|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AK289644|SPATA2|9825|spermatogenesis associated 2##NM_001135773|SPATA2|9825|spermatogenesis associated 2##BC009481|SPATA2|9825|spermatogenesis associated 2##AB018300|SPATA2|9825|spermatogenesis associated 2##AK023229|SPATA2|9825|spermatogenesis associated 2##U28164|SPATA2|9825|spermatogenesis associated 2	0.946415	CTCF.p2:25:0.946
chr2	136231278	136231411	reg1012869.p1	10.487	+	NM_001172435 NM_012233 TSC_hg19_v1_chr2_+_135809861 AK022494 BC146809 BC071602 D31886 AB385272 AB449877 BC030992	-421428	+	BC137276 BC137277 BC144555 AY574901 AY574902 AY574903 AY574904 AY574905 NM_001018046 NM_025052	-449098	-	TSC_hg19_v1_chr2_+_135676409 AF048732	-554925	+	AK095362 BC089429 NM_032143	57442	-	TSC_hg19_v1_chr2_+_136289050 BC001217 D21852 BC041093 NM_015361	57716	+	TSC_hg19_v1_chr2_+_136499328 NM_014607 AK311058	267893	+	NM_001172435|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##NM_012233|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AK022494|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC146809|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC071602|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##D31886|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AB449877|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC030992|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC137276|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##BC137277|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##BC144555|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574901|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574902|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574903|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574904|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574905|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##NM_001018046|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##NM_025052|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AF048732|CCNT2|905|cyclin T2##AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##BC001217|R3HDM1|23518|R3H domain containing 1##D21852|R3HDM1|23518|R3H domain containing 1##BC041093|R3HDM1|23518|R3H domain containing 1##NM_015361|R3HDM1|23518|R3H domain containing 1##NM_014607|UBXN4|23190|UBX domain protein 4##AK311058|UBXN4|23190|UBX domain protein 4	0.853319	CTCF.p2:-2:0.853
chr5	42583504	42583620	reg1009847.p1	10.487	+	BC136496 NM_001242460 NM_001242461 NM_001242462	-17598	+	NM_001242406 Z11850	-18000	+	NM_001242405	-33381	+	AK303469 NM_001134848 AK127368 BC015985 BC039102 TSC_hg19_v1_chr5_+_42756958	173376	+	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	228429	-	TSC_hg19_v1_chr5_-_42993436 AK056817	409884	-	BC136496|GHR|2690|growth hormone receptor##NM_001242460|GHR|2690|growth hormone receptor##NM_001242461|GHR|2690|growth hormone receptor##NM_001242462|GHR|2690|growth hormone receptor##NM_001242406|GHR|2690|growth hormone receptor##Z11850|GHR|2690|growth hormone receptor##NM_001242405|GHR|2690|growth hormone receptor##AK303469|CCDC152|100129792|coiled-coil domain containing 152##NM_001134848|CCDC152|100129792|coiled-coil domain containing 152##AK127368|CCDC152|100129792|coiled-coil domain containing 152##BC015985|CCDC152|100129792|coiled-coil domain containing 152##BC039102|CCDC152|100129792|coiled-coil domain containing 152##Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK056817|FLJ32255|643977|uncharacterized LOC643977	0.999335	CTCF.p2:-4:0.999
chr7	143317248	143317378	reg1010283.p1	10.487	+	BC043153 BC110410 NM_001008747 BC146818 BC150314	-48422	+	BC101157 BC101158 NM_176883	-142348	+	AB529260 BC100938 BC100939 BC100940 BC100941 NM_177437	-176768	+	BC041464 AK315909 NM_001130025 AK098041 AK297123 AL832734 BC033189	749	+	BC113530 BC117233 NM_173678 AY167570 BC010225	1229	+	NM_001130026 AK296318	95637	+	BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_001008747|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC146818|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC150314|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC101157|TAS2R41|259287|taste receptor, type 2, member 41##BC101158|TAS2R41|259287|taste receptor, type 2, member 41##NM_176883|TAS2R41|259287|taste receptor, type 2, member 41##BC100938|TAS2R60|338398|taste receptor, type 2, member 60##BC100939|TAS2R60|338398|taste receptor, type 2, member 60##BC100940|TAS2R60|338398|taste receptor, type 2, member 60##BC100941|TAS2R60|338398|taste receptor, type 2, member 60##NM_177437|TAS2R60|338398|taste receptor, type 2, member 60##BC041464|LOC154761|154761|uncharacterized LOC154761##NM_001130025|FAM115C|285966|family with sequence similarity 115, member C##AK098041|FAM115C|285966|family with sequence similarity 115, member C##AK297123|LOC154761|154761|uncharacterized LOC154761##AL832734|FAM115C|285966|family with sequence similarity 115, member C##BC033189|LOC154761|154761|uncharacterized LOC154761##BC113530|FAM115C|285966|family with sequence similarity 115, member C##BC117233|FAM115C|285966|family with sequence similarity 115, member C##NM_173678|FAM115C|285966|family with sequence similarity 115, member C##AY167570|FAM115C|285966|family with sequence similarity 115, member C##BC010225|LOC154761|154761|uncharacterized LOC154761##NM_001130026|FAM115C|285966|family with sequence similarity 115, member C##AK296318|FAM115C|285966|family with sequence similarity 115, member C	0.999676	CTCF.p2:15:1.000
chr10	102632130	102632242	reg1011157.p1	10.486	+	TSC_hg19_v1_chr10_+_102505338 L25597 M89470 NM_000278 NM_003987 NM_003988 NM_003989 NM_003990	-126784	+	TSC_hg19_v1_chr10_+_102295705 AF395830 BC007719 AB528628 DQ892767 DQ896013	-336428	+	TSC_hg19_v1_chr10_+_102295696 AK295353 NM_017902 AK000622	-336551	+	AF460991 AF460992 NM_001136123 NM_001243770 NM_018121	40139	+	TSC_hg19_v1_chr10_+_102672719 AK292565 AL832343 AL833126 BC015131 BC047715 BC030565 BC064526 BC020915 BC073832 AL832383 AB385255	40589	+	TSC_hg19_v1_chr10_+_102729286 BC051030 AK297431	97090	+	L25597|PAX2|5076|paired box 2##M89470|PAX2|5076|paired box 2##NM_000278|PAX2|5076|paired box 2##NM_003987|PAX2|5076|paired box 2##NM_003988|PAX2|5076|paired box 2##NM_003989|PAX2|5076|paired box 2##NM_003990|PAX2|5076|paired box 2##AF395830|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##BC007719|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ892767|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ896013|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK295353|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##NM_017902|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK000622|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AF460991|FAM178A|55719|family with sequence similarity 178, member A##AF460992|FAM178A|55719|family with sequence similarity 178, member A##NM_001136123|FAM178A|55719|family with sequence similarity 178, member A##NM_001243770|FAM178A|55719|family with sequence similarity 178, member A##NM_018121|FAM178A|55719|family with sequence similarity 178, member A##AK292565|FAM178A|55719|family with sequence similarity 178, member A##AL832343|FAM178A|55719|family with sequence similarity 178, member A##AL833126|FAM178A|55719|family with sequence similarity 178, member A##BC015131|FAM178A|55719|family with sequence similarity 178, member A##BC047715|FAM178A|55719|family with sequence similarity 178, member A##BC030565|FAM178A|55719|family with sequence similarity 178, member A##BC064526|FAM178A|55719|family with sequence similarity 178, member A##BC020915|FAM178A|55719|family with sequence similarity 178, member A##BC073832|FAM178A|55719|family with sequence similarity 178, member A##AL832383|FAM178A|55719|family with sequence similarity 178, member A##BC051030|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G##AK297431|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	0.993667	CTCF.p2:12:0.994
chr6	170839022	170839142	reg1011473.p1	10.484	+	TSC_hg19_v1_chr6_+_170615849 AB058741 AL832883	-223202	+	TSC_hg19_v1_chr6_+_170615846 BC012177 NM_032448 AK296825 AK296730	-223239	+	TSC_hg19_v1_chr6_+_170615836 DQ873695 AK056435	-223274	+	TSC_hg19_v1_chr6_-_170862371 AB451312 AB451442 AB528712 BT019720 CU676728 EU176329 EU176672 D00761 AB209078 AK223193 BC000508 BC020807	23268	-	TSC_hg19_v1_chr6_-_170862392 AK058050 NM_002793	23315	-	NM_001172085 NM_003194 AK304648 TSC_hg19_v1_chr6_+_170863459 AK315222 BC110341 Z22828 AK298272 M55654 BC109054 BC109053	24382	+	AB058741|FAM120B|84498|family with sequence similarity 120B##AL832883|FAM120B|84498|family with sequence similarity 120B##BC012177|FAM120B|84498|family with sequence similarity 120B##NM_032448|FAM120B|84498|family with sequence similarity 120B##AK296825|FAM120B|84498|family with sequence similarity 120B##AK296730|FAM120B|84498|family with sequence similarity 120B##DQ873695|FAM120B|84498|family with sequence similarity 120B##AK056435|FAM120B|84498|family with sequence similarity 120B##AB451312|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##AB451442|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##BT019720|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##EU176329|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##EU176672|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##D00761|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##AB209078|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##AK223193|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##BC000508|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##BC020807|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##AK058050|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##NM_002793|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##NM_001172085|TBP|6908|TATA box binding protein##NM_003194|TBP|6908|TATA box binding protein##AK304648|TBP|6908|TATA box binding protein##AK315222|TBP|6908|TATA box binding protein##BC110341|TBP|6908|TATA box binding protein##Z22828|TBP|6908|TATA box binding protein##AK298272|TBP|6908|TATA box binding protein##M55654|TBP|6908|TATA box binding protein##BC109054|TBP|6908|TATA box binding protein##BC109053|TBP|6908|TATA box binding protein	0.994444	CTCF.p2:17:0.994
chr6	5031007	5031138	reg1011635.p1	10.484	+	TSC_hg19_v1_chr6_+_5030223 BC042032 BC133670	-839	+	TSC_hg19_v1_chr6_-_5004262 BC017871 NM_006638	-26802	-	TSC_hg19_v1_chr6_+_5004043 AK094934	-27046	+	NM_001145115	54647	+	AF088060 EU831799 EU831876 TSC_hg19_v1_chr6_-_5260976 AK309661 AK291158 BC067762 AF170070 AF285118 BC009552	229925	-	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	230094	-	BC042032|LOC100129461|100129461|uncharacterized LOC100129461##BC133670|LOC100129461|100129461|uncharacterized LOC100129461##BC017871|RPP40|10799|ribonuclease P/MRP 40kDa subunit##NM_006638|RPP40|10799|ribonuclease P/MRP 40kDa subunit##AK094934|LOC285778|285778|uncharacterized LOC285778##NM_001145115|PPP1R3G|648791|protein phosphatase 1, regulatory subunit 3G##AF088060|LYRM4|57128|LYR motif containing 4##EU831799|LYRM4|57128|LYR motif containing 4##EU831876|LYRM4|57128|LYR motif containing 4##AK309661|LYRM4|57128|LYR motif containing 4##AK291158|LYRM4|57128|LYR motif containing 4##BC067762|LYRM4|57128|LYR motif containing 4##AF170070|LYRM4|57128|LYR motif containing 4##AF285118|LYRM4|57128|LYR motif containing 4##BC009552|LYRM4|57128|LYR motif containing 4##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4	0.997669	CTCF.p2:-10:0.998
chr10	82684231	82684361	reg1011334.p1	10.483	+	AK123978 NM_001145719	-383722	+	AK123885 NM_207372	-386639	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-470192	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	950786	+	DQ857894 NM_001165973	953146	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3214961	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.998425	CTCF.p2:-9:0.998
chr13	74409411	74409539	reg1009995.p1	10.483	+	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-776271	+	TSC_hg19_v1_chr13_+_73356270 NM_006346 AK309828 BC006009 BC008432 BC041806 BC051911 AY370776 AY375528	-1053165	+	BC056143 TSC_hg19_v1_chr13_-_73356083 AK314715 BC038101 NM_001128226 NM_014953	-1053269	-	AF161471 AF113122 NM_007249	298514	-	TSC_hg19_v1_chr13_-_74708425 AK291397	298921	-	CR749622 TSC_hg19_v1_chr13_-_75901948	1492447	-	AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_006346|PIBF1|10464|progesterone immunomodulatory binding factor 1##AK309828|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC006009|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC008432|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC041806|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC051911|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY370776|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY375528|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC056143|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AK314715|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##BC038101|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_001128226|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_014953|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK291397|KLF12|11278|Kruppel-like factor 12##CR749622|TBC1D4|9882|TBC1 domain family, member 4	0.99858	CTCF.p2:0:0.999
chr22	22929514	22929623	reg1011014.p1	10.483	+	BC014074 NM_206955 NM_206956 AK304593 TSC_hg19_v1_chr22_-_22901678 BC039731 U65011 NM_006115 NM_206953 NM_206954 BC022008	-27974	-	BC053901 AK093108 NM_080740	-54964	-	AK097608 NM_080764	-66064	-	NM_199127 X98922 CU686896 BC069534	59230	+	TSC_hg19_v1_chr22_+_23010757 L29162	81192	+	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	99635	+	BC014074|PRAME|23532|preferentially expressed antigen in melanoma##NM_206955|PRAME|23532|preferentially expressed antigen in melanoma##NM_206956|PRAME|23532|preferentially expressed antigen in melanoma##AK304593|PRAME|23532|preferentially expressed antigen in melanoma##BC039731|PRAME|23532|preferentially expressed antigen in melanoma##U65011|PRAME|23532|preferentially expressed antigen in melanoma##NM_006115|PRAME|23532|preferentially expressed antigen in melanoma##NM_206953|PRAME|23532|preferentially expressed antigen in melanoma##NM_206954|PRAME|23532|preferentially expressed antigen in melanoma##BC022008|PRAME|23532|preferentially expressed antigen in melanoma##BC053901|ZNF280A|129025|zinc finger protein 280A##AK093108|ZNF280A|129025|zinc finger protein 280A##NM_080740|ZNF280A|129025|zinc finger protein 280A##AK097608|ZNF280B|140883|zinc finger protein 280B##NM_080764|ZNF280B|140883|zinc finger protein 280B##NM_199127|GGTLC2|91227|gamma-glutamyltransferase light chain 2##X98922|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC069534|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25	0.99984	CTCF.p2:13:1.000
chr5	18466345	18466462	reg1010320.p1	10.483	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-1248563	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-1248791	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-1530018	-	AK295087 BC031051 NM_001167667 NM_004934	1521919	-	TSC_hg19_v1_chr5_+_21459621 AK290693	2993206	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	2993245	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.999862	CTCF.p2:-11:1.000
chrX	115002296	115002417	reg1008663.p2	10.483	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-174488	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-205314	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-206750	+	BC003645 TSC_hg19_v1_chrX_-_115085443	83083	-	AK313927 NM_000686 X87723 U16957	299639	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	565411	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428907	CTCF.p2:33:0.429
chr14	107012791	107012918	reg1012633.p1	10.482	+	GQ232968 DQ454715 DQ454740 DQ454804 FJ840179 GU552701 FJ840340 GQ232950 GQ232981 GU552754 DQ454538 DQ454540 DQ454585 DQ523858 GU552713 AY003858 DQ454386 DQ454541 DQ454621 DQ454676 GU552719 GU552720 GU552767 AY003800 EF566901 DQ454598 DQ454606 DQ454788 DQ455001 DQ454592 Z11947 FJ873823 FJ873826 FJ873839 FJ873846 FJ873864 FJ873876 FJ873933 FJ873992 HM116214 EF175393 AY003851 EF175424 EU350424 GU358679 JF810268 EU099085 EU099261 AY206990 AF103064 AM279530 HM996031 GQ903512 AF103334 AF062095 AF103183 AF103113 L07311 AF165109 AY062321 HM774774 JN110645 JN110658 JN110671 JN110688 JN110706 JN110718 FJ385349 HM774039 HM774378 HM774566 HM774910 HQ704000 HQ704008 HQ704009 AY062300 HM774238 HM775050 AF103319 AF194121 HM775049 DQ100804 EU146317 EU146347 EU146389 DQ100818 DQ100905 AJ006652 AF485463 AF485473 AY423189 AY423190 AY423196 AY423198 AY423199 AY423207 HM996483 AF103257 AY941883 DQ100909 AF006520 AJ249628 AY866746 DQ187712 DQ524024 GU570284 HM995016 HM995139 HM995190 HM995191 HM995236 HM995887 HM995889 HM995890 HM995891 HM995919 HM996054 HM996304 HM996511 AJ245323 AJ245324 DQ322799 DQ840839 DQ840841 DQ926120 DQ926247 DQ926326 AB374202 AF115123 AF174048 AJ245353 AJ245354 AJ245355 AJ278773 AY640567 AY866807 AY941926 AY944711 DQ100900 DQ100918 DQ926040 DQ926081 DQ926084 DQ926450 DQ926565 DQ926602 DQ926604 EU794403 Z18824 AB021525 AB063673 AB363090 AB363101 AB363126 AB363166 AF021949 AF021979 AF035023 AF052525 AF062215 AF062235 AF129457 AF174081 AF398962 AF408730 AF455546 AF455553 AF471175 AF471178 AF471201 AF471216 AF471265 AF471373 AF471475 AF471476 AF471477 AF471486 AF471490 AF471494 AF471528 AJ239363 AJ239370 AJ389190 AJ413993 AJ627249 AM040520 AM040566 AM259133 AM259134 AY466507 AY866733 AY866738 AY866759 AY866795 AY941854 AY941870 AY941906 AY941952 AY941974 AY941976 AY941980 AY962566 D83682 DQ065617 DQ205182 DQ212502 DQ212503 DQ535300 DQ535366 DQ535419 DQ535472 DQ926167 DQ926385 DQ926389 DQ926413 DQ926426 DQ926459 DQ926557 DQ926616 EF177950 EU549721 FJ492926 GQ903506 GU570336 GU570338 GU570341 HM152510 U00501 U77374 X59703 X87449 Z33898 Z96965 Z98722 AF283800 AJ519241 HM995874 AJ519332 L28051 AJ519250 AJ519294 AY392920 AY393056 L08082 AF062182 AF062206 AF062253 AF062285 AY190818 X81729 Z47218 TSC_hg19_v1_chr14_-_106994347 AK097076 AK097206 AK097859 AK126358 AK128664 AK130501 AK301358 BX640853 BX640854	-18680	-	BX640710 TSC_hg19_v1_chr14_-_106967543 AK097354 AK097357 L22586 AK092384 AK125238 AX747511 AK125703 AK092976 AX747834 AK097028 L06610	-45287	-	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	-45554	-	DQ187707 GU552700 GU552764 AY003783 EF175429 FJ694883 EU099078 EU099213 AM183990 EU099124 HM774924 HM774242 JN110729 JN110849 AF103239 FJ385422 FJ385433 HM773968 HM773995 HM774338 HM774389 HM774601 HM774867 HM996424 HQ704020 FJ385411 EU146318 JN110975 AF062300 AF062305 DQ524053 HM994912 HM994914 HM994916 HM994920 HM995673 HM995674 HM995675 HM995676 HM995783 HM995910 HM995945 HM996441 HM996522 AF062299 AF471505 DQ187607 DQ322806 DQ840692 DQ840693 DQ840702 DQ840814 AM279609 DQ926615 EF178081 X99992 AB063924 AB066892 AB066969 AB067011 AB067080 AB067263 AF394199 AF455925 AF459632 AF471500 AF471503 AF471504 AJ300805 AJ579185 AY055477 AY055483 AY640482 AY941852 D83692 DQ005278 DQ005282 DQ100801 DQ926649 GU570351 GU570352 GU570354 L12185 L12186 X64240 Y11898 Z96974 HM995768 AJ519245 AJ519224 AJ519230 AJ519233 AJ519246 AJ519249 AJ519251 AJ519253 AJ519255 HM995877 AJ519222 AJ519299 AY393054 AY393058 AY393158 AY393161 AY190818 Z36887 AY623427 X52894 BC090938 TSC_hg19_v1_chr14_-_107013458	436	-	TSC_hg19_v1_chr14_-_107013478 AK093806 AK097303 AK125632 AK126320 AK129510 AX748317	622	-	AF267786 AF460742 AF460743 DQ454547 DQ454549 DQ454453 DQ454546 DQ454587 DQ454772 DQ523855 DQ454644 GU552737 DQ454456 DQ454588 DQ454927 EU433863 DQ454420 DQ454430 DQ454879 DQ454417 DQ454704 DQ454916 DQ454924 DQ454969 GU552772 DQ454423 DQ455004 EU099273 GU552771 DQ454935 DQ523903 DQ454770 DQ454843 FJ840010 FJ840025 FJ840144 FJ840161 FJ840267 FJ840276 FJ840292 FJ840293 FJ840346 FJ840350 FJ840358 FJ840360 FJ840363 FJ873816 FJ873820 FJ873848 FJ873865 FJ873868 FJ873928 FJ873940 FJ873954 FJ873964 FJ873985 FJ874015 FJ874045 FJ874091 GQ232837 HM116178 HM116213 HM116223 AJ008166 EU433880 GQ232769 GQ232840 GQ232959 EF175426 FJ694889 EF441751 EF441753 AY998718 U44492 U44503 U44504 U44505 AF017462 AJ008170 AJ008172 AJ008178 AJ008203 AJ487495 AJ230634 AJ230635 AJ230636 AJ230637 AJ230638 AJ230640 AJ230641 AJ230642 AJ230643 AJ230644 AJ230646 AJ230649 AJ230652 AJ230655 AJ230656 AJ230657 M34028 AY577299 S73611 S73613 FJ385326 GQ232913 GQ232958 GU552732 GU552750 AM279543 AF085655 AF085656 EU099270 AM233802 AM233804 EU099059 EU099279 EU099288 GQ232907 AF209895 AF209899 AF211932 AF343357 AF343358 AF343374 AF343390 AF343395 AF343401 AF343405 AF343419 AF343420 U86784 AJ862553 AJ862555 AJ862556 AJ862558 AJ862559 AJ862560 AJ862561 AJ862562 AJ862563 AJ862564 AJ862566 AJ862569 AJ862573 AM233783 AM233785 AM233805 AM233806 AM233807 AM233841 AY062302 HM774009 HM996214 AF103038 EU099234 HM773977 HM774742 AY062301 HM773976 HM774100 HM774513 HM774833 HM775004 HQ704065 HQ704066 HQ704067 HQ704068 AF103039 HM774204 HM774915 JN110745 JN110851 JN111173 JN111174 JN111195 JN111203 JN111206 JN111213 L04327 L04331 FJ385346 FJ385432 HM774001 HM774101 HM774244 HM774256 HM774288 HM774294 HM774334 HM774417 HM774549 HM774581 HM774591 HM774745 HM774776 HM774778 HM774796 HM774808 HM774855 HM774958 HM774983 HQ704004 HQ704052 HM775063 Z46853 AF103177 DQ524149 EU146312 EU146344 EU146346 EU146382 AB067195 AF103056 AY393315 AY393569 AY393571 EU099233 AF306373 AJ580927 AY062322 AY376089 U70236 AY393249 AY393314 AY393316 AY393318 AY393319 AY393320 AY393321 AY393455 AY393456 AY393457 AY393458 AY393459 AY393463 AY393466 AY393471 AY393566 AY393567 AY393568 AY393570 AY393572 AY393573 EU099231 EU099232 M34022 U00574 AF110479 AY062303 DQ926264 DQ926266 DQ926273 AF129750 AM233827 AM233828 AM233830 AM233831 AM233832 AM233833 AM233836 AM233838 AY640515 AB066833 AY941987 DQ168569 HM996472 HQ378399 AF021959 AJ239373 AJ272398 AJ555263 AY685303 DQ100803 DQ490742 DQ523920 DQ523934 DQ523971 DQ524022 DQ524049 DQ524147 DQ524150 DQ524160 DQ926054 GU570396 GU570398 HM995095 HM995420 HM995456 HM995460 HM995529 HM995571 HM995573 HM995577 HM995607 HM995969 HM996171 HM996234 HM996245 HM996273 HM996421 HM996528 HM996547 HQ378338 U77555 X94019 X94043 Z46759 HM995213 AB063835 AB063897 AB063925 AB066826 AB066832 AB066935 AB067154 AB067157 AB067159 AB067175 AB067326 AB067330 AB067334 AB067392 AB245095 AF174110 AF394197 AM279622 AY640502 AY640546 AY941916 AY941923 AY941958 AY971039 AY971068 AY971072 AY971073 AY971085 AY971113 AY971118 AY971121 AY971122 DQ100861 DQ100955 DQ100988 DQ490743 DQ926034 DQ926082 DQ926086 DQ926177 DQ926233 DQ926269 DQ926292 DQ926295 DQ926339 DQ926351 DQ926360 DQ926597 DQ926609 DQ926637 DQ926643 DQ926654 EU794427 EU794430 EU794443 FJ385310 FJ385369 GU570400 GU570406 HQ378329 HQ378361 HQ378384 X61649 AB063926 AB066971 AB066985 AB067015 AB067070 AB067074 AB067100 AB067116 AB067125 AB067129 AB067241 AF062125 AF062157 AF078940 AF078941 AF099197 AF110480 AF110484 AF110486 AF110487 AF174068 AF442760 AJ002767 AJ002771 AJ002772 AJ002773 AJ002774 AJ002775 AJ006165 AJ249378 AJ249636 AJ276099 AJ399826 AJ414007 AJ491906 AJ491907 AJ491913 AJ491914 AJ555254 AY033242 AY033243 AY033250 AY033274 AY033275 AY033276 AY033281 AY033282 AY033286 AY033288 AY640520 AY781870 AY941877 AY941878 AY941879 AY941919 AY941920 AY941921 AY971098 DQ065619 DQ065621 DQ065625 DQ065655 DQ065657 DQ065658 DQ205181 DQ379476 DQ490737 DQ490744 DQ926149 DQ926201 DQ926390 DQ926391 DQ926462 DQ926465 DQ926503 DQ926525 DQ926533 DQ926560 HM152490 HQ378409 L12198 L26537 U22381 U44493 U77538 U77539 U77541 U77544 U77547 U77548 U77549 U77550 U77551 U77552 U77553 U77557 U77558 U77559 U77560 U77561 U77562 U77563 U77564 U77565 U77566 U77567 X87447 X94002 X94004 X94005 X94006 X94028 X94029 X94030 X94031 X94032 X94038 X94039 X94041 X94044 X94045 X94046 X94048 X94050 X94051 X94052 X94053 X94055 X94058 X94059 X94061 X94062 X94063 X94066 X94071 X94072 X94073 X94077 Z46760 Z97037 DQ535275 DQ535319 DQ535340 DQ535347 DQ535361 DQ535401 DQ535430 DQ535447 DQ535450 DQ535454 DQ535458 DQ926623 EF177983 EF177986 EF178042 EF178049 EF178067 EF178105 FJ195497 FJ195499 FJ195517 FJ195521 FJ195527 FJ195537 JN252502 Z26829 Z26830 Z26832 Z26833 Z26839 Z26842 Z26843 Z26844 HM995790 HM995656 HM995886 M27125 U77535 U77543 U77554 U77556 AY393198 AY393202 HM995637 HM995880 AY392957 AY392958 AY392962 AY392964 AY392965 AY392966 AY392968 AY392969 AY392970 AY392976 AY392978 AY392980 AY392984 AY393084 AY393086 AY393087 AY393088 AY393090 AY393092 AY393094 AY393096 AY393097 AY393185 AY393186 AY393187 AY393188 AY393189 AY393191 AY393192 AY393193 AY393194 AY393195 AY393196 AY393197 AY393199 AY393200 AY393201 AY393203 AY393204 AF085657 AF085658 AF085659 AM233808 AF052379 AF062154 AF062214 AF348829 AF348830 AF348831 AF348832 AF348833 AF348834 AJ131060 AM233779 AM233780 AM233803 AM233834 AM233839 AY190828 L03679 X65912 X65913 X65914 X65915 Z47219 Z47225 X58402 BC014258 X58401 X58400 X58397 BC089417 BC078670 TSC_hg19_v1_chr14_-_107035221	22137	-	AF035023|IGHV3-48|28424|immunoglobulin heavy variable 3-48##AK097076|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097859|IGHM|3507|immunoglobulin heavy constant mu##AK128664|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130501|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640854|IGH@|3492|immunoglobulin heavy locus##BX640710|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK097354|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097357|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK092384|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125238|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092976|IGHM|3507|immunoglobulin heavy constant mu##AK097028|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC014258|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089417|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC078670|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.999586	CTCF.p2:15:1.000
chr3	161278169	161278316	reg1010957.p3	10.482	+	NM_001080440	-63647	+	AF458592 BC037817 NM_001040100	-188434	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-339121	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	3518036	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	3636263	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	4276951	-	NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase	0.976606	CTCF.p2:-9:0.977
chr7	97924243	97924392	reg1012488.p1	10.481	+	TSC_hg19_v1_chr7_+_97911041 AF106966 HQ257947	-13253	+	NM_001159491 NM_015379 TSC_hg19_v1_chr7_+_97910997 AB055977 BC018737 AF041430 BC062370 BC071992	-13318	+	TSC_hg19_v1_chr7_-_97881512 AK292996 BC053591 NM_015395 AK057048	-42818	-	TSC_hg19_v1_chr7_-_98015920 D28374	91597	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	105977	-	NM_018842 TSC_hg19_v1_chr7_-_98030431	106116	-	AF106966|BRI3|25798|brain protein I3##HQ257947|BRI3|25798|brain protein I3##NM_001159491|BRI3|25798|brain protein I3##NM_015379|BRI3|25798|brain protein I3##AB055977|BRI3|25798|brain protein I3##BC018737|BRI3|25798|brain protein I3##AF041430|BRI3|25798|brain protein I3##BC062370|BRI3|25798|brain protein I3##AK292996|TECPR1|25851|tectonin beta-propeller repeat containing 1##BC053591|TECPR1|25851|tectonin beta-propeller repeat containing 1##NM_015395|TECPR1|25851|tectonin beta-propeller repeat containing 1##AK057048|TECPR1|25851|tectonin beta-propeller repeat containing 1##D28374|RPS3A|6189|ribosomal protein S3A##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1	0.966401	CTCF.p2:-1:0.966
chr15	58562282	58562392	reg1009616.p1	10.480	+	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	-131851	+	NM_001206897 NM_003888 NM_170696	-204217	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	-204459	-	NM_000236 X07228 AK293324 AK309448 TSC_hg19_v1_chr15_+_58724189 D83548 BC132825 BC136495 J03895 J03540 AB528021 HQ258274	161865	+	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	479452	-	TSC_hg19_v1_chr15_-_59041833 AK300472	479485	-	AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_000236|LIPC|3990|lipase, hepatic##X07228|LIPC|3990|lipase, hepatic##AK293324|LIPC|3990|lipase, hepatic##AK309448|LIPC|3990|lipase, hepatic##D83548|LIPC|3990|lipase, hepatic##BC132825|LIPC|3990|lipase, hepatic##BC136495|LIPC|3990|lipase, hepatic##J03895|LIPC|3990|lipase, hepatic##J03540|LIPC|3990|lipase, hepatic##HQ258274|LIPC|3990|lipase, hepatic##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10##AK300472|ADAM10|102|ADAM metallopeptidase domain 10	0.995033	CTCF.p2:-7:0.995
chr17	45854093	45854216	reg1011762.p1	10.480	+	AF093098 NM_013351 AK223634 BC039739 AF241243 AB590854 TSC_hg19_v1_chr17_+_45810959	-43370	+	TSC_hg19_v1_chr17_+_45773425 AB383985	-80705	+	TSC_hg19_v1_chr17_+_45773067 BC111418	-81115	+	BC065482 TSC_hg19_v1_chr17_-_45899130	44970	-	TSC_hg19_v1_chr17_-_45899154 AF323729 AK000267 BC028010 NM_145798 AK289523 AF392446	45031	-	CU677497 CU690922 DQ891139 DQ894318 BC015904 TSC_hg19_v1_chr17_-_45908897 BC039852 AK293624 BC052601 NM_145255 NM_148887	54739	-	AF093098|TBX21|30009|T-box 21##NM_013351|TBX21|30009|T-box 21##AK223634|TBX21|30009|T-box 21##BC039739|TBX21|30009|T-box 21##AF241243|TBX21|30009|T-box 21##BC111418|TBKBP1|9755|TBK1 binding protein 1##BC065482|OSBPL7|114881|oxysterol binding protein-like 7##AF323729|OSBPL7|114881|oxysterol binding protein-like 7##BC028010|OSBPL7|114881|oxysterol binding protein-like 7##NM_145798|OSBPL7|114881|oxysterol binding protein-like 7##AK289523|OSBPL7|114881|oxysterol binding protein-like 7##AF392446|OSBPL7|114881|oxysterol binding protein-like 7##DQ891139|MRPL10|124995|mitochondrial ribosomal protein L10##DQ894318|MRPL10|124995|mitochondrial ribosomal protein L10##BC015904|MRPL10|124995|mitochondrial ribosomal protein L10##BC039852|MRPL10|124995|mitochondrial ribosomal protein L10##AK293624|MRPL10|124995|mitochondrial ribosomal protein L10##BC052601|MRPL10|124995|mitochondrial ribosomal protein L10##NM_145255|MRPL10|124995|mitochondrial ribosomal protein L10##NM_148887|MRPL10|124995|mitochondrial ribosomal protein L10	0.757395	CTCF.p2:-7:0.757
chr17	63096780	63096906	reg1007865.p3	10.480	+	TSC_hg19_v1_chr17_-_63052903 AK301699 NM_006572	-43942	-	BC011925 TSC_hg19_v1_chr17_-_63052851	-44010	-	TSC_hg19_v1_chr17_-_63052756 L22075 BC036756	-44083	-	NM_001081955 NM_001165933 NM_003835 TSC_hg19_v1_chr17_+_63133479	36627	+	TSC_hg19_v1_chr17_+_63133501 AK309061 AK290535 BC022504 AK301719 AF071476 AK289876 AF493933 AY585191	36736	+	BC006295 TSC_hg19_v1_chr17_-_63556453	459632	-	AK301699|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_006572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##L22075|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC036756|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_001081955|RGS9|8787|regulator of G-protein signaling 9##NM_001165933|RGS9|8787|regulator of G-protein signaling 9##NM_003835|RGS9|8787|regulator of G-protein signaling 9##AK309061|RGS9|8787|regulator of G-protein signaling 9##AK290535|RGS9|8787|regulator of G-protein signaling 9##BC022504|RGS9|8787|regulator of G-protein signaling 9##AK301719|RGS9|8787|regulator of G-protein signaling 9##AF071476|RGS9|8787|regulator of G-protein signaling 9##AK289876|RGS9|8787|regulator of G-protein signaling 9##AF493933|RGS9|8787|regulator of G-protein signaling 9##AY585191|RGS9|8787|regulator of G-protein signaling 9##BC006295|AXIN2|8313|axin 2	0.995784	CTCF.p2:0:0.996
chr22	36673807	36673927	reg1011487.p1	10.480	+	TSC_hg19_v1_chr22_+_36649178 AF305224 AK303919 AK313752 AK298053 BC113867 BC114475 BC127186 BC143038 BC143039 BC017331 AK296099	-24678	+	NM_001136540 NM_001136541 NM_003661 NM_145343 TSC_hg19_v1_chr22_+_36649135 AF019225 AF323540 AK309143 AF305428 AK300454 BC112943 BC141823 BC142720	-24728	+	AF324224 NM_145637	-37868	-	BC011915 TSC_hg19_v1_chr22_-_36681760	7896	-	D11393 TSC_hg19_v1_chr22_-_36697021	23147	-	TSC_hg19_v1_chr22_-_36783906 AB290175 CR456526	110019	-	AF305224|APOL1|8542|apolipoprotein L, 1##AK303919|APOL1|8542|apolipoprotein L, 1##AK313752|APOL1|8542|apolipoprotein L, 1##AK298053|APOL1|8542|apolipoprotein L, 1##BC113867|APOL1|8542|apolipoprotein L, 1##BC114475|APOL1|8542|apolipoprotein L, 1##BC127186|APOL1|8542|apolipoprotein L, 1##BC143038|APOL1|8542|apolipoprotein L, 1##BC143039|APOL1|8542|apolipoprotein L, 1##BC017331|APOL1|8542|apolipoprotein L, 1##AK296099|APOL1|8542|apolipoprotein L, 1##NM_001136540|APOL1|8542|apolipoprotein L, 1##NM_001136541|APOL1|8542|apolipoprotein L, 1##NM_003661|APOL1|8542|apolipoprotein L, 1##NM_145343|APOL1|8542|apolipoprotein L, 1##AF019225|APOL1|8542|apolipoprotein L, 1##AF323540|APOL1|8542|apolipoprotein L, 1##AK309143|APOL1|8542|apolipoprotein L, 1##AF305428|APOL1|8542|apolipoprotein L, 1##AK300454|APOL1|8542|apolipoprotein L, 1##BC112943|APOL1|8542|apolipoprotein L, 1##BC141823|APOL1|8542|apolipoprotein L, 1##BC142720|APOL1|8542|apolipoprotein L, 1##AF324224|APOL2|23780|apolipoprotein L, 2##NM_145637|APOL2|23780|apolipoprotein L, 2##BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle##D11393|MYH9|4627|myosin, heavy chain 9, non-muscle##AB290175|MYH9|4627|myosin, heavy chain 9, non-muscle##CR456526|MYH9|4627|myosin, heavy chain 9, non-muscle	0.979011	CTCF.p2:13:0.979
chr11	102537186	102537328	reg1012845.p1	10.479	+	AB527354 NM_004771 Y12779	-41202	-	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	-135798	-	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-213644	-	AB527320 AF195192 AY358752 NM_022122	39198	-	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	58396	-	BT007442 DQ891931 DQ895118 X07820 BC002591 AK222601 AK313960 NM_002425	114082	-	NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BT007442|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ891931|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ895118|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##X07820|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##BC002591|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##AK222601|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##AK313960|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##NM_002425|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)	0.974591	CTCF.p2:14:0.975
chr15	85131369	85131473	reg1010198.p1	10.479	+	NM_001243531	-290180	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-808594	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-1015193	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	12860	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	66051	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	66085	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	0.993863	CTCF.p2:-48:0.994
chr21	42441105	42441222	reg1009715.p1	10.479	+	AF023450 NM_001389 AF217525	-222112	-	AB384859 AB209136 TSC_hg19_v1_chr21_-_42218650	-222545	-	NM_006198 U52969 AK289964 BC013791 X93349 AF416716 AM183336	-1201786	+	AF178532 AF188276 AF188277 NM_012105 NM_138991 NM_138992	98564	+	AK075539 AK292056 AF050171 TSC_hg19_v1_chr21_+_42540086	98907	+	TSC_hg19_v1_chr21_+_42540092 AY358927 AF117892 BC014453 AF204944 AF200192 AB590241 DQ895416 EU176330 AF200342	98978	+	AF023450|DSCAM|1826|Down syndrome cell adhesion molecule##NM_001389|DSCAM|1826|Down syndrome cell adhesion molecule##AF217525|DSCAM|1826|Down syndrome cell adhesion molecule##AB209136|DSCAM|1826|Down syndrome cell adhesion molecule##NM_006198|PCP4|5121|Purkinje cell protein 4##U52969|PCP4|5121|Purkinje cell protein 4##AK289964|PCP4|5121|Purkinje cell protein 4##BC013791|PCP4|5121|Purkinje cell protein 4##X93349|PCP4|5121|Purkinje cell protein 4##AF416716|PCP4|5121|Purkinje cell protein 4##AM183336|PCP4|5121|Purkinje cell protein 4##AF178532|BACE2|25825|beta-site APP-cleaving enzyme 2##AF188276|BACE2|25825|beta-site APP-cleaving enzyme 2##AF188277|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_012105|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_138991|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_138992|BACE2|25825|beta-site APP-cleaving enzyme 2##AK075539|BACE2|25825|beta-site APP-cleaving enzyme 2##AK292056|BACE2|25825|beta-site APP-cleaving enzyme 2##AF050171|BACE2|25825|beta-site APP-cleaving enzyme 2##AY358927|BACE2|25825|beta-site APP-cleaving enzyme 2##AF117892|BACE2|25825|beta-site APP-cleaving enzyme 2##BC014453|BACE2|25825|beta-site APP-cleaving enzyme 2##AF204944|BACE2|25825|beta-site APP-cleaving enzyme 2##AF200192|BACE2|25825|beta-site APP-cleaving enzyme 2##DQ895416|BACE2|25825|beta-site APP-cleaving enzyme 2##EU176330|BACE2|25825|beta-site APP-cleaving enzyme 2##AF200342|BACE2|25825|beta-site APP-cleaving enzyme 2	0.99629	CTCF.p2:-5:0.996
chr8	109716138	109716272	reg1009955.p1	10.479	+	TSC_hg19_v1_chr8_+_109455874 AK290974 D14659 AB384437 CR457402 CU676696 CU692380 HQ447150	-260325	+	TSC_hg19_v1_chr8_+_109455865 BC021667 NM_014673 AK222615 BC007027 BC020753	-260353	+	TSC_hg19_v1_chr8_-_109260947 BC017887 AK313186 BC005944 BC016706 BC021679 U94175 U62962 BC008419 NM_001568 AK310902	-455220	-	AK055230 NM_153015 BC033057 BC030710	83601	-	BC105045 BC113360 NM_003301 X72089 D16845 AY493373 HQ258206 X75071	383491	+	AF283302 AK311583 AF521133 NM_001128211 AK307663	625929	-	AK290974|TTC35|9694|tetratricopeptide repeat domain 35##D14659|TTC35|9694|tetratricopeptide repeat domain 35##CR457402|TTC35|9694|tetratricopeptide repeat domain 35##HQ447150|TTC35|9694|tetratricopeptide repeat domain 35##BC021667|TTC35|9694|tetratricopeptide repeat domain 35##NM_014673|TTC35|9694|tetratricopeptide repeat domain 35##AK222615|TTC35|9694|tetratricopeptide repeat domain 35##BC007027|TTC35|9694|tetratricopeptide repeat domain 35##BC020753|TTC35|9694|tetratricopeptide repeat domain 35##BC017887|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK313186|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC005944|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC016706|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC021679|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U94175|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U62962|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC008419|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##NM_001568|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK310902|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK055230|TMEM74|157753|transmembrane protein 74##NM_153015|TMEM74|157753|transmembrane protein 74##BC030710|TMEM74|157753|transmembrane protein 74##BC105045|TRHR|7201|thyrotropin-releasing hormone receptor##BC113360|TRHR|7201|thyrotropin-releasing hormone receptor##NM_003301|TRHR|7201|thyrotropin-releasing hormone receptor##X72089|TRHR|7201|thyrotropin-releasing hormone receptor##D16845|TRHR|7201|thyrotropin-releasing hormone receptor##AY493373|TRHR|7201|thyrotropin-releasing hormone receptor##HQ258206|TRHR|7201|thyrotropin-releasing hormone receptor##X75071|TRHR|7201|thyrotropin-releasing hormone receptor##AF283302|NUDCD1|84955|NudC domain containing 1##AK311583|NUDCD1|84955|NudC domain containing 1##AF521133|NUDCD1|84955|NudC domain containing 1##NM_001128211|NUDCD1|84955|NudC domain containing 1##AK307663|NUDCD1|84955|NudC domain containing 1	0.993813	CTCF.p2:16:0.994
chr8	66280201	66280296	reg1009770.p2	10.479	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	-568969	-	TSC_hg19_v1_chr8_+_65493611 AK091333	-786584	+	NM_152414 AK293979	-787390	+	TSC_hg19_v1_chr8_-_66546394 AK001373	266147	-	TSC_hg19_v1_chr8_-_66546404 AK304463	266158	-	TSC_hg19_v1_chr8_-_66546413 BC011607 BC018846 NM_018120	266184	-	BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK001373|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1##BC011607|ARMC1|55156|armadillo repeat containing 1##BC018846|ARMC1|55156|armadillo repeat containing 1##NM_018120|ARMC1|55156|armadillo repeat containing 1	0.093571	
chrX	47356789	47356912	reg1012103.p1	10.479	+	BC015023 NM_007130 NM_153380	-14506	-	U28687 NM_003446 BC075003 AB528013 EU446919	-126827	+	TSC_hg19_v1_chrX_+_47092422 AK055588 AK098394 BC073960 BC063668 AB073597 BC000350 AB385092 U44839 AK294635	-264385	+	NM_001654 X04790 TSC_hg19_v1_chrX_+_47420605 AB208831 AK300975 AK130043 AK297453 AK307747 BC002466 BC007514	63717	+	TSC_hg19_v1_chrX_+_47441773 NM_003254 AK074854 AK296116 BC000866 BC007097	84873	+	TSC_hg19_v1_chrX_+_47441834 X03124 M12670 AK310206 AK311937 AK307222 M59906 X02598	84973	+	BC015023|ZNF41|7592|zinc finger protein 41##NM_007130|ZNF41|7592|zinc finger protein 41##NM_153380|ZNF41|7592|zinc finger protein 41##U28687|ZNF157|7712|zinc finger protein 157##NM_003446|ZNF157|7712|zinc finger protein 157##BC075003|ZNF157|7712|zinc finger protein 157##EU446919|ZNF157|7712|zinc finger protein 157##AK055588|USP11|8237|ubiquitin specific peptidase 11##AK098394|USP11|8237|ubiquitin specific peptidase 11##BC073960|USP11|8237|ubiquitin specific peptidase 11##BC063668|USP11|8237|ubiquitin specific peptidase 11##AB073597|USP11|8237|ubiquitin specific peptidase 11##BC000350|USP11|8237|ubiquitin specific peptidase 11##U44839|USP11|8237|ubiquitin specific peptidase 11##AK294635|USP11|8237|ubiquitin specific peptidase 11##NM_001654|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##X04790|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AB208831|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK300975|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK130043|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK297453|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK307747|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC002466|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC007514|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##NM_003254|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK074854|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK296116|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC000866|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC007097|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X03124|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M12670|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK310206|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK311937|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M59906|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X02598|TIMP1|7076|TIMP metallopeptidase inhibitor 1	0.159381	
chr11	46269259	46269391	reg1011941.p1	10.478	+	TSC_hg19_v1_chr11_-_46142986 AK023258 NM_001101802 NM_016621	-126328	-	TSC_hg19_v1_chr11_+_45944226 BC037291	-325109	+	AK055829 AK096021 NM_152312	-326142	+	TSC_hg19_v1_chr11_+_46299212 AK314072 NM_052854	29880	+	BC014097 TSC_hg19_v1_chr11_+_46299557 BC015781 AB063321	30235	+	TSC_hg19_v1_chr11_+_46299596 AB463458 CU680776 DQ895809 EU176365	30298	+	AK023258|PHF21A|51317|PHD finger protein 21A##NM_001101802|PHF21A|51317|PHD finger protein 21A##NM_016621|PHF21A|51317|PHD finger protein 21A##BC037291|GYLTL1B|120071|glycosyltransferase-like 1B##AK055829|GYLTL1B|120071|glycosyltransferase-like 1B##AK096021|GYLTL1B|120071|glycosyltransferase-like 1B##NM_152312|GYLTL1B|120071|glycosyltransferase-like 1B##AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	0.064255	
chr1	89985499	89985599	reg1009278.p1	10.477	+	NM_198460 AK131356	-156105	+	AY358953 AK090479 AF328727 AF430643 TSC_hg19_v1_chr1_-_89738544 BC031639 AF430642 NM_001134486 NM_052942	-247035	-	AK304245 AB527149 AF288814 AK131094 AL832576 BC070055 BC017889 AK312417 BC008421 NM_052941	-320978	-	NM_001134476 TSC_hg19_v1_chr1_+_89990414	4866	+	TSC_hg19_v1_chr1_+_89990454 BC060782 BC030607	4927	+	AF385436 NM_015350	38722	+	NM_198460|GBP6|163351|guanylate binding protein family, member 6##AK131356|GBP6|163351|guanylate binding protein family, member 6##AY358953|GBP5|115362|guanylate binding protein 5##AK090479|GBP5|115362|guanylate binding protein 5##AF328727|GBP5|115362|guanylate binding protein 5##AF430643|GBP5|115362|guanylate binding protein 5##BC031639|GBP5|115362|guanylate binding protein 5##AF430642|GBP5|115362|guanylate binding protein 5##NM_001134486|GBP5|115362|guanylate binding protein 5##NM_052942|GBP5|115362|guanylate binding protein 5##AK304245|GBP4|115361|guanylate binding protein 4##AF288814|GBP4|115361|guanylate binding protein 4##AK131094|GBP4|115361|guanylate binding protein 4##AL832576|GBP4|115361|guanylate binding protein 4##BC070055|GBP4|115361|guanylate binding protein 4##BC017889|GBP4|115361|guanylate binding protein 4##AK312417|GBP4|115361|guanylate binding protein 4##BC008421|GBP4|115361|guanylate binding protein 4##NM_052941|GBP4|115361|guanylate binding protein 4##NM_001134476|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC060782|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC030607|LRRC8B|23507|leucine rich repeat containing 8 family, member B##AF385436|LRRC8B|23507|leucine rich repeat containing 8 family, member B##NM_015350|LRRC8B|23507|leucine rich repeat containing 8 family, member B	0.0	
chr13	44765685	44765803	reg1012709.p1	10.476	+	AK096044 NM_153218 TSC_hg19_v1_chr13_+_44453986 BC035749	-311738	+	NM_144974 AK056408	-311919	-	NM_001128303	-312325	+	BC029067 NM_001010897 TSC_hg19_v1_chr13_+_44947983	182238	+	U35048 TSC_hg19_v1_chr13_-_45010962 AJ222700 BC105277 BC069207	245208	-	BC146664 BC146679 TSC_hg19_v1_chr13_-_45010983 BC000456 BC016867	245235	-	AK096044|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_153218|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC035749|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC029067|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##NM_001010897|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##U35048|TSC22D1|8848|TSC22 domain family, member 1##AJ222700|TSC22D1|8848|TSC22 domain family, member 1##BC105277|TSC22D1|8848|TSC22 domain family, member 1##BC069207|TSC22D1|8848|TSC22 domain family, member 1##BC146664|TSC22D1|8848|TSC22 domain family, member 1##BC146679|TSC22D1|8848|TSC22 domain family, member 1##BC000456|TSC22D1|8848|TSC22 domain family, member 1##BC016867|TSC22D1|8848|TSC22 domain family, member 1	0.204452	CTCF.p2:0:0.204
chr1	101774929	101775055	reg1010277.p1	10.475	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-72422	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-72611	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-283559	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	687495	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	687798	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1721791	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.991511	CTCF.p2:-18:0.992
chr11	121462234	121462360	reg1009391.p2	10.475	+	TSC_hg19_v1_chr11_+_121461071 AK294404	-1199	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-139122	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	-139348	+	BC130361 BC130363 AF303179 NM_001001786	524564	-	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	1064250	+	BC070266 AK313578 AF001622 NM_019604	1246932	+	AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule	0.999623	CTCF.p2:11:1.000
chr2	148089703	148089841	reg1011347.p1	10.475	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-2811851	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-2812141	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-2814569	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	512345	+	TSC_hg19_v1_chr2_+_148602300 AK314124	512563	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	512873	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.17677	
chr22	23030229	23030343	reg1010271.p2	10.475	+	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	-1083	+	TSC_hg19_v1_chr22_+_23010757 L29162	-19526	+	NM_199127 X98922 CU686896 BC069534	-41488	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	10232	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	24596	+	TSC_hg19_v1_chr22_+_23063107 M18645 X53070 BC073786 X57805 X57813 AF026926 L35916 L35917 L35918 L35920 U43769 X64165 X64166 X54442	32845	+	BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25##NM_199127|GGTLC2|91227|gamma-glutamyltransferase light chain 2##X98922|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC069534|GGTLC2|91227|gamma-glutamyltransferase light chain 2##DQ896079|IGL@|3535|immunoglobulin lambda locus##BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3##L35918|IGLJ3|28831|immunoglobulin lambda joining 3	0.436956	CTCF.p2:1:0.437
chr5	39714334	39714451	reg1009448.p1	10.475	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-289075	-	TSC_hg19_v1_chr5_-_39425082 AK314381	-289328	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	-289441	-	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	965635	+	TSC_hg19_v1_chr5_+_40680042 L25124	965652	+	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	1041648	-	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33	0.803871	CTCF.p2:-2:0.804
chr9	132489001	132489127	reg1012108.p1	10.475	+	TSC_hg19_v1_chr9_+_132428029 AF061970	-60998	+	BC014645 NM_016307 TSC_hg19_v1_chr9_+_132427927	-61141	+	CU688098 EU831817 EU831894 BC065913 TSC_hg19_v1_chr9_-_132404419 AK023004 BC001719 AK225618 AK299193 AK000555 AK292807 NM_001202403 NM_017873 NM_177999	-84695	-	AB590756 AF027740 AF217965 AF010316 TSC_hg19_v1_chr9_-_132515313 AK311947 BC008280 NM_004878	26252	-	TSC_hg19_v1_chr9_+_132565426 AF317129 NM_014506	76356	+	TSC_hg19_v1_chr9_+_132565465 BC015578 DQ893204 DQ893205 DQ893696 DQ896532 DQ896533 DQ896867	76409	+	AF061970|PRRX2|51450|paired related homeobox 2##BC014645|PRRX2|51450|paired related homeobox 2##NM_016307|PRRX2|51450|paired related homeobox 2##EU831817|ASB6|140459|ankyrin repeat and SOCS box containing 6##EU831894|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC065913|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK023004|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC001719|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK225618|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK299193|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK000555|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK292807|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_001202403|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_017873|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_177999|ASB6|140459|ankyrin repeat and SOCS box containing 6##AF027740|PTGES|9536|prostaglandin E synthase##AF217965|PTGES|9536|prostaglandin E synthase##AF010316|PTGES|9536|prostaglandin E synthase##AK311947|PTGES|9536|prostaglandin E synthase##BC008280|PTGES|9536|prostaglandin E synthase##NM_004878|PTGES|9536|prostaglandin E synthase##AF317129|TOR1B|27348|torsin family 1, member B (torsin B)##NM_014506|TOR1B|27348|torsin family 1, member B (torsin B)##BC015578|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893204|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893205|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893696|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896532|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896533|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896867|TOR1B|27348|torsin family 1, member B (torsin B)	0.132904	
chr18	51645937	51646092	reg1009954.p1	10.473	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-1778901	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-1779473	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-2921974	-	TSC_hg19_v1_chr18_-_51690988 AL110266	44978	-	AF072246 TSC_hg19_v1_chr18_-_51750614	104523	-	TSC_hg19_v1_chr18_-_51750997 BC032638	104951	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	0.960632	CTCF.p2:5:0.961
chr3	193179578	193179692	reg1010308.p2	10.473	+	AY823163 NM_198505 AK122613	-83063	-	TSC_hg19_v1_chr3_+_192959112 AB030816	-220525	+	TSC_hg19_v1_chr3_+_192958897 BC048095 NM_020386	-220731	+	AY823162 BC101496 AK095277 NM_032279	93006	-	TSC_hg19_v1_chr3_+_193310928 NM_015560 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837	131320	+	TSC_hg19_v1_chr3_+_193311006 BC043443 BC075805 AB011139	131432	+	AY823163|ATP13A5|344905|ATPase type 13A5##NM_198505|ATP13A5|344905|ATPase type 13A5##AK122613|ATP13A5|344905|ATPase type 13A5##AB030816|HRASLS|57110|HRAS-like suppressor##BC048095|HRASLS|57110|HRAS-like suppressor##NM_020386|HRASLS|57110|HRAS-like suppressor##AY823162|ATP13A4|84239|ATPase type 13A4##BC101496|ATP13A4|84239|ATPase type 13A4##AK095277|ATP13A4|84239|ATPase type 13A4##NM_032279|ATP13A4|84239|ATPase type 13A4##NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)##BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)##BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)##AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)	0.832674	CTCF.p2:3:0.833
chr2	39174919	39175046	reg1010466.p1	10.472	+	NM_001145451	-28479	+	AY367766 NM_001145450 TSC_hg19_v1_chr2_+_39103127 BC102032 BC102034 BC102035	-71829	+	BC131534 BC060778 NM_198963 AK307514 AK296739 BC153875	-71954	-	TSC_hg19_v1_chr2_-_39187477 BC030087	12498	-	L13857 AB463274 NM_005633	172600	-	TSC_hg19_v1_chr2_-_39348166 AK290228	173177	-	NM_001145451|ARHGEF33|100271715|Rho guanine nucleotide exchange factor (GEF) 33##AY367766|MORN2|729967|MORN repeat containing 2##NM_001145450|MORN2|729967|MORN repeat containing 2##BC102032|MORN2|729967|MORN repeat containing 2##BC102034|MORN2|729967|MORN repeat containing 2##BC102035|MORN2|729967|MORN repeat containing 2##BC131534|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##BC060778|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##NM_198963|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##AK307514|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##AK296739|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##BC153875|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##BC030087|LOC375196|375196|uncharacterized LOC375196##L13857|SOS1|6654|son of sevenless homolog 1 (Drosophila)##NM_005633|SOS1|6654|son of sevenless homolog 1 (Drosophila)##AK290228|SOS1|6654|son of sevenless homolog 1 (Drosophila)	0.99836	CTCF.p2:-4:0.998
chr11	123278189	123278328	reg1011135.p1	10.471	+	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	-212253	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	-212356	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	-345379	-	TSC_hg19_v1_chr11_+_123396366 AK127457	118097	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	118246	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	152715	+	AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AK127457|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B	0.999329	CTCF.p2:9:0.999
chr11	123451407	123451540	reg1011781.p1	10.471	+	AB033027 TSC_hg19_v1_chr11_+_123431038	-20436	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	-20500	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	-54969	+	AJ243396 AB032984 TSC_hg19_v1_chr11_-_123525042	73488	-	TSC_hg19_v1_chr11_-_123525303 AK314513 AL136589 NM_001040151 NM_018400	73834	-	AK023751 TSC_hg19_v1_chr11_-_123612326 BC013382 NM_003455	160872	-	AB033027|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AK314513|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AL136589|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_001040151|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_018400|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AK023751|ZNF202|7753|zinc finger protein 202##BC013382|ZNF202|7753|zinc finger protein 202##NM_003455|ZNF202|7753|zinc finger protein 202	0.996158	CTCF.p2:-21:0.996
chr8	28994819	28994979	reg1012620.p1	10.471	+	TSC_hg19_v1_chr8_+_28748135 AY522342 DQ269478 BC069242 NM_024567	-246772	+	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	-246982	+	NM_001145159 NM_018250	-247202	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	125715	-	AL137704 NM_057158	211422	-	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	213171	-	AY522342|HMBOX1|79618|homeobox containing 1##DQ269478|HMBOX1|79618|homeobox containing 1##BC069242|HMBOX1|79618|homeobox containing 1##NM_024567|HMBOX1|79618|homeobox containing 1##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4	0.660682	CTCF.p2:-2:0.661
chr21	26980715	26980842	reg1009972.p1	10.470	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	-963	-	TSC_hg19_v1_chr21_+_26934442 AF402776	-46306	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-1179710	+	NM_021219 TSC_hg19_v1_chr21_+_27011719	30875	+	TSC_hg19_v1_chr21_+_27011769 AK312708 AY077698 AY016009 AX772824 AK294769	31059	+	AY358361 BC017779 TSC_hg19_v1_chr21_+_27012056	31273	+	BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##AK124194|FLJ42200|400860|FLJ42200 protein##NM_021219|JAM2|58494|junctional adhesion molecule 2##AK312708|JAM2|58494|junctional adhesion molecule 2##AY077698|JAM2|58494|junctional adhesion molecule 2##AY016009|JAM2|58494|junctional adhesion molecule 2##AX772824|JAM2|58494|junctional adhesion molecule 2##AK294769|JAM2|58494|junctional adhesion molecule 2##AY358361|JAM2|58494|junctional adhesion molecule 2##BC017779|JAM2|58494|junctional adhesion molecule 2	0.9958	CTCF.p2:-12:0.915
chrX	75369162	75369319	reg1008228.p1	10.470	+	BC093964 BC111949 AF490509 AK094624 NM_138703	-364212	-	TSC_hg19_v1_chrX_-_74743299 NM_001146256 NM_001146257 NM_144969	-625923	-	AY358786 TSC_hg19_v1_chrX_-_74743270	-625974	-	AY927529 AY927616 BC001220 NM_016500 TSC_hg19_v1_chrX_+_75392896 AF151079 BC051894	23599	+	TSC_hg19_v1_chrX_+_75392955 CU674612	23715	+	NM_020932 TSC_hg19_v1_chrX_+_75648083 AB046807 AF490507 AK291270 BC050588	278864	+	BC093964|MAGEE2|139599|melanoma antigen family E, 2##BC111949|MAGEE2|139599|melanoma antigen family E, 2##AF490509|MAGEE2|139599|melanoma antigen family E, 2##AK094624|MAGEE2|139599|melanoma antigen family E, 2##NM_138703|MAGEE2|139599|melanoma antigen family E, 2##NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15##NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15##NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15##AY358786|ZDHHC15|158866|zinc finger, DHHC-type containing 15##AY927616|CXorf26|51260|chromosome X open reading frame 26##BC001220|CXorf26|51260|chromosome X open reading frame 26##NM_016500|CXorf26|51260|chromosome X open reading frame 26##BC051894|CXorf26|51260|chromosome X open reading frame 26##NM_020932|MAGEE1|57692|melanoma antigen family E, 1##AB046807|MAGEE1|57692|melanoma antigen family E, 1##AF490507|MAGEE1|57692|melanoma antigen family E, 1##AK291270|MAGEE1|57692|melanoma antigen family E, 1##BC050588|MAGEE1|57692|melanoma antigen family E, 1	0.011928	
chr10	105446046	105446150	reg1009067.p1	10.468	+	TSC_hg19_v1_chr10_-_105437934 AK304828	-8177	-	TSC_hg19_v1_chr10_-_105421464 AK294454	-24649	-	AB385330 TSC_hg19_v1_chr10_-_105420936	-25190	-	TSC_hg19_v1_chr10_-_105452931 AK294736 AK295314 AK315983 AK295660	6852	-	TSC_hg19_v1_chr10_-_105615306 NM_014631	169172	-	TSC_hg19_v1_chr10_-_105677943 BC017400	231831	-	AK304828|SH3PXD2A|9644|SH3 and PX domains 2A##AK294454|SH3PXD2A|9644|SH3 and PX domains 2A##AK294736|SH3PXD2A|9644|SH3 and PX domains 2A##AK295314|SH3PXD2A|9644|SH3 and PX domains 2A##AK315983|SH3PXD2A|9644|SH3 and PX domains 2A##AK295660|SH3PXD2A|9644|SH3 and PX domains 2A##NM_014631|SH3PXD2A|9644|SH3 and PX domains 2A##BC017400|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1	0.995776	CTCF.p2:14:0.996
chr1	19670970	19671097	reg1011931.p1	10.468	+	NM_001040125 NM_001040126 NM_017765 TSC_hg19_v1_chr1_+_19638819 AK000327 AK130175 AK125580 AK130171 AK172745 BC015324	-32238	+	BC007352 BC012171 TSC_hg19_v1_chr1_-_19638614 BC010852 NM_003689	-32399	-	TSC_hg19_v1_chr1_-_19638598 Y16675 AF026947 AK225267	-32428	-	TSC_hg19_v1_chr1_-_19811972 AK313113 BC107752	140934	-	TSC_hg19_v1_chr1_-_19812006 AK125085	140973	-	NM_001206540 NM_004930 TSC_hg19_v1_chr1_-_19812073	141056	-	NM_001040125|PQLC2|54896|PQ loop repeat containing 2##NM_001040126|PQLC2|54896|PQ loop repeat containing 2##NM_017765|PQLC2|54896|PQ loop repeat containing 2##AK000327|PQLC2|54896|PQ loop repeat containing 2##AK130175|PQLC2|54896|PQ loop repeat containing 2##AK125580|PQLC2|54896|PQ loop repeat containing 2##AK130171|PQLC2|54896|PQ loop repeat containing 2##AK172745|PQLC2|54896|PQ loop repeat containing 2##BC015324|PQLC2|54896|PQ loop repeat containing 2##BC007352|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC012171|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC010852|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##NM_003689|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##Y16675|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AF026947|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AK225267|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AK313113|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##BC107752|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##AK125085|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_001206540|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_004930|CAPZB|832|capping protein (actin filament) muscle Z-line, beta	0.943548	CTCF.p2:-3:0.944
chr19	31174000	31174120	reg1010447.p1	10.468	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	-310680	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	-740778	+	BC026184 NM_001252641	-759510	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	666287	-	FJ211597 NM_001205273	909126	+	TSC_hg19_v1_chr19_+_32836524 NM_001136156 NM_014910 AK292526 AB029007 BX640881 BC136417 AL713775	1662502	+	BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5##NM_001136156|ZNF507|22847|zinc finger protein 507##NM_014910|ZNF507|22847|zinc finger protein 507##AK292526|ZNF507|22847|zinc finger protein 507##AB029007|ZNF507|22847|zinc finger protein 507##BX640881|ZNF507|22847|zinc finger protein 507##BC136417|ZNF507|22847|zinc finger protein 507##AL713775|ZNF507|22847|zinc finger protein 507	0.946654	CTCF.p2:-10:0.947
chr10	13313661	13313755	reg1008998.p1	10.467	+	BC018068 NM_145314	-37381	-	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	-110140	+	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	-171563	+	NM_001037537	28037	-	TSC_hg19_v1_chr10_-_13342061 CR542055 DQ891007 DQ894185	28341	-	TSC_hg19_v1_chr10_-_13342064 AF023462 BC029512 AF112977 BC021011 NM_006214	28388	-	BC018068|UCMA|221044|upper zone of growth plate and cartilage matrix associated##NM_145314|UCMA|221044|upper zone of growth plate and cartilage matrix associated##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_001037537|PHYH|5264|phytanoyl-CoA 2-hydroxylase##CR542055|PHYH|5264|phytanoyl-CoA 2-hydroxylase##DQ891007|PHYH|5264|phytanoyl-CoA 2-hydroxylase##DQ894185|PHYH|5264|phytanoyl-CoA 2-hydroxylase##AF023462|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC029512|PHYH|5264|phytanoyl-CoA 2-hydroxylase##AF112977|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC021011|PHYH|5264|phytanoyl-CoA 2-hydroxylase##NM_006214|PHYH|5264|phytanoyl-CoA 2-hydroxylase	0.995579	CTCF.p2:-5:0.996
chr18	56916561	56916687	reg1010714.p1	10.467	+	TSC_hg19_v1_chr18_+_56887389 AK307264 BC004488 NM_001012512 NM_001012513 NM_002091 K02054 DQ893451 DQ896223 AB528662 AB102889 BT006803	-29181	+	TSC_hg19_v1_chr18_+_56807119 AK314107 AF212233 AK311213 NM_033280 AK295346 AK307127 BC009703 CU679449	-109477	+	TSC_hg19_v1_chr18_+_56531281 BC036366	-385275	+	BC051901 AF115392 NM_013435 AB593018	24030	-	EU831768 EU831846 AY286502 BC065562 BX640655 AB593158 BX648518 BC106887 BC106888 AK123184 NM_181654	69162	-	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	109862	-	AK307264|GRP|2922|gastrin-releasing peptide##BC004488|GRP|2922|gastrin-releasing peptide##NM_001012512|GRP|2922|gastrin-releasing peptide##NM_001012513|GRP|2922|gastrin-releasing peptide##NM_002091|GRP|2922|gastrin-releasing peptide##K02054|GRP|2922|gastrin-releasing peptide##DQ893451|GRP|2922|gastrin-releasing peptide##DQ896223|GRP|2922|gastrin-releasing peptide##AB102889|GRP|2922|gastrin-releasing peptide##BT006803|GRP|2922|gastrin-releasing peptide##AK314107|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AF212233|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##NM_033280|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK295346|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307127|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##BC009703|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##BC036366|ZNF532|55205|zinc finger protein 532##BC051901|RAX|30062|retina and anterior neural fold homeobox##AF115392|RAX|30062|retina and anterior neural fold homeobox##NM_013435|RAX|30062|retina and anterior neural fold homeobox##AB593018|RAX|30062|retina and anterior neural fold homeobox##EU831768|CPLX4|339302|complexin 4##EU831846|CPLX4|339302|complexin 4##AY286502|CPLX4|339302|complexin 4##BC065562|CPLX4|339302|complexin 4##BX640655|CPLX4|339302|complexin 4##AB593158|CPLX4|339302|complexin 4##BX648518|CPLX4|339302|complexin 4##BC106887|CPLX4|339302|complexin 4##BC106888|CPLX4|339302|complexin 4##AK123184|CPLX4|339302|complexin 4##NM_181654|CPLX4|339302|complexin 4##DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1	0.948039	CTCF.p2:-14:0.948
chr2	102447846	102447974	reg1011732.p1	10.467	+	TSC_hg19_v1_chr2_+_102314168 NM_001242560 NM_004834 NM_145686 BC064691 AK296396 AF096300 NM_001242559 NM_145687 AB384511 AY212247 AY834276	-133558	+	AK131289 AK298610 NM_001145664 TSC_hg19_v1_chr2_-_102091212	-356717	-	TSC_hg19_v1_chr2_-_102003966 BC032949 BC047514 NM_153836 AB046109	-443921	-	TSC_hg19_v1_chr2_+_102508334 BC045694	60432	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	60622	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	160453	+	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK131289|RFX8|731220|regulatory factor X, 8##AK298610|RFX8|731220|regulatory factor X, 8##NM_001145664|RFX8|731220|regulatory factor X, 8##BC032949|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC047514|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_153836|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AB046109|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II	0.123739	
chr11	13794133	13794267	reg1012601.p1	10.466	+	AY423606 BC017377 TSC_hg19_v1_chr11_+_13690267 AY600449	-103933	+	TSC_hg19_v1_chr11_+_13690255 AK315527 AK026381	-103947	+	CR936619 TSC_hg19_v1_chr11_+_13690235	-103963	+	TSC_hg19_v1_chr11_+_13984277 NM_006108 AK291780 AK074803 BC136513 BC136563 BC006262 AB051390	190083	+	AK309550 AK309683 NM_001177315 NM_001102669	585851	-	TSC_hg19_v1_chr11_-_14380730 BC013106 AK299606 AK313976 NM_012250	586477	-	AY423606|FAR1|84188|fatty acyl CoA reductase 1##BC017377|FAR1|84188|fatty acyl CoA reductase 1##AY600449|FAR1|84188|fatty acyl CoA reductase 1##AK315527|FAR1|84188|fatty acyl CoA reductase 1##AK026381|FAR1|84188|fatty acyl CoA reductase 1##CR936619|FAR1|84188|fatty acyl CoA reductase 1##NM_006108|SPON1|10418|spondin 1, extracellular matrix protein##AK291780|SPON1|10418|spondin 1, extracellular matrix protein##AK074803|SPON1|10418|spondin 1, extracellular matrix protein##BC136513|SPON1|10418|spondin 1, extracellular matrix protein##BC136563|SPON1|10418|spondin 1, extracellular matrix protein##AB051390|SPON1|10418|spondin 1, extracellular matrix protein##AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##BC013106|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK299606|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK313976|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_012250|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	0.928498	CTCF.p2:-12:0.928
chr16	8999201	8999314	reg1010329.p2	10.466	+	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	-36397	-	NM_001042476 BC001333	-37005	-	NM_000303 TSC_hg19_v1_chr16_+_8891675 AK296123 U85773 AK300785 AK291537 AK299979 AK311035 AK312532 AK304320 AK296630 BC008310	-107559	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	58038	-	TSC_hg19_v1_chr16_+_9185545 NM_014117	186283	+	TSC_hg19_v1_chr16_+_9185577 BC113570	186346	+	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_000303|PMM2|5373|phosphomannomutase 2##U85773|PMM2|5373|phosphomannomutase 2##AK300785|PMM2|5373|phosphomannomutase 2##AK291537|PMM2|5373|phosphomannomutase 2##AK299979|PMM2|5373|phosphomannomutase 2##AK311035|PMM2|5373|phosphomannomutase 2##AK312532|PMM2|5373|phosphomannomutase 2##AK304320|PMM2|5373|phosphomannomutase 2##AK296630|PMM2|5373|phosphomannomutase 2##BC008310|PMM2|5373|phosphomannomutase 2##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##BC113570|C16orf72|29035|chromosome 16 open reading frame 72	0.307373	CTCF.p2:-8:0.307
chr6	11585799	11585935	reg1013303.p1	10.466	+	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-47369	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-203327	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-352957	-	NM_001143948 NM_032744	193412	-	NM_002114	426856	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	704726	+	NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.470243	CTCF.p2:-12:0.470
chrY	1315754	1315886	reg1012914.p1	10.466	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	-34236	-	NM_000451 NM_006883 U89331	-780742	+	AK293506 NM_013239	-1018131	-	NM_001161529 NM_001161531 NM_001161532 NM_006140 NM_172245 NM_172246 NM_172249 AK293086 AK301395 BC071835 M64445 BC002635 AL833597 AK309630 L29348 L29349 U93096 X17648	21894	+	NM_001161530 NM_172247 M73832 DQ893104 DQ896376 AB590144 CU687176 DQ841258 X54935	35763	+	BC035407 NM_002183	89688	+	AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2##NM_000451|SHOX|6473|short stature homeobox##NM_006883|SHOX|6473|short stature homeobox##U89331|SHOX|6473|short stature homeobox##AK293506|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_013239|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_001161529|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161531|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161532|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_006140|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172245|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172246|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172249|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK293086|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK301395|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC071835|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M64445|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC002635|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AL833597|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK309630|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29348|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29349|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##U93096|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X17648|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161530|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172247|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M73832|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ893104|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ896376|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ841258|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X54935|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC035407|IL3RA|3563|interleukin 3 receptor, alpha (low affinity)##NM_002183|IL3RA|3563|interleukin 3 receptor, alpha (low affinity)	0.999879	CTCF.p2:12:1.000
chr11	123172447	123172582	reg1010302.p1	10.465	+	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	-106509	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	-106612	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	-239635	-	TSC_hg19_v1_chr11_+_123396366 AK127457	223841	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	223990	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	258459	+	AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AK127457|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B	0.995254	CTCF.p2:0:0.995
chr14	69596110	69596233	reg1010396.p2	10.465	+	TSC_hg19_v1_chr14_-_69446038 NM_001102 NM_001130004 NM_001130005	-150108	-	TSC_hg19_v1_chr14_-_69446010 BC003576	-150162	-	TSC_hg19_v1_chr14_-_69445990 BC004984	-150179	-	TSC_hg19_v1_chr14_-_69619315 AL831932	23171	-	TSC_hg19_v1_chr14_-_69619740 AB463347 CU692762 BC022967 BX648006 AB058727	23504	-	TSC_hg19_v1_chr14_-_69619843 BC136632	23673	-	NM_001102|ACTN1|87|actinin, alpha 1##NM_001130004|ACTN1|87|actinin, alpha 1##NM_001130005|ACTN1|87|actinin, alpha 1##BC003576|ACTN1|87|actinin, alpha 1##BC004984|ACTN1|87|actinin, alpha 1##AL831932|DCAF5|8816|DDB1 and CUL4 associated factor 5##BC022967|DCAF5|8816|DDB1 and CUL4 associated factor 5##BX648006|DCAF5|8816|DDB1 and CUL4 associated factor 5##AB058727|DCAF5|8816|DDB1 and CUL4 associated factor 5##BC136632|DCAF5|8816|DDB1 and CUL4 associated factor 5	0.998343	CTCF.p2:-5:0.998
chr2	169615827	169615950	reg1009926.p1	10.465	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	-303013	+	TSC_hg19_v1_chr2_+_169312764 AK172775	-303129	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	-511815	-	AK093444 AX748130 NM_001171631	27160	+	NM_001039724 NM_001171632 BC014189 NM_052946 AK002203 AK290254 BC093072 AJ532842 DQ402497	43239	+	TSC_hg19_v1_chr2_-_169746945 AF225416 BC022255 NM_020675 AK291093	131053	-	NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6##AK172775|CERS6|253782|ceramide synthase 6##BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##AK093444|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171631|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001039724|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171632|NOSTRIN|115677|nitric oxide synthase trafficker##BC014189|NOSTRIN|115677|nitric oxide synthase trafficker##NM_052946|NOSTRIN|115677|nitric oxide synthase trafficker##AK002203|NOSTRIN|115677|nitric oxide synthase trafficker##AK290254|NOSTRIN|115677|nitric oxide synthase trafficker##BC093072|NOSTRIN|115677|nitric oxide synthase trafficker##AJ532842|NOSTRIN|115677|nitric oxide synthase trafficker##DQ402497|NOSTRIN|115677|nitric oxide synthase trafficker##AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	0.622177	CTCF.p2:30:0.622
chr2	175562051	175562170	reg1012305.p1	10.465	+	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	-14356	-	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	-62813	-	TSC_hg19_v1_chr2_-_175462533 BC002914 X86019	-99629	-	TSC_hg19_v1_chr2_+_175584527 DQ895855	22468	+	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	67059	-	AK055060 NM_001206602	150200	-	BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1##AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1##X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1##DQ895855|H3F3A|3020|H3 histone, family 3A##AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1	0.961442	CTCF.p2:-6:0.961
chr3	32060696	32060811	reg1010410.p1	10.465	+	AF392451 NM_001174060 NM_017784	-37464	-	AK294003 NM_001137674	-37488	+	TSC_hg19_v1_chr3_-_32022751 BC003168 AF346291 AK304067 AK097503	-37984	-	TSC_hg19_v1_chr3_+_32148004 NM_015141 D42047	87268	+	TSC_hg19_v1_chr3_+_32148151 BC028726 AK292808 AB385275	87415	+	TSC_hg19_v1_chr3_+_32280171 AF474370 AY598783 NM_178868	219412	+	AF392451|OSBPL10|114884|oxysterol binding protein-like 10##NM_001174060|OSBPL10|114884|oxysterol binding protein-like 10##NM_017784|OSBPL10|114884|oxysterol binding protein-like 10##AK294003|ZNF860|344787|zinc finger protein 860##NM_001137674|ZNF860|344787|zinc finger protein 860##BC003168|OSBPL10|114884|oxysterol binding protein-like 10##AF346291|OSBPL10|114884|oxysterol binding protein-like 10##AK304067|OSBPL10|114884|oxysterol binding protein-like 10##NM_015141|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##D42047|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##BC028726|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AK292808|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AF474370|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AY598783|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##NM_178868|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8	0.990698	CTCF.p2:0:0.991
chr5	163440191	163440341	reg1012553.p1	10.465	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-507623	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-509978	+	NM_001142556 NM_001142557 NM_012484 NM_012485 BC057235 AK313603 BC030505 TSC_hg19_v1_chr5_+_162887665 AK302975 BC006984 AK303616 BC070281 BC017793 U29343 AF032862 BC108904 BC108905 BC107869 AK290577	-552671	+	HE578282 HE578283 NM_001122679	3271576	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	4278555	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	4473208	+	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001142556|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001142557|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012484|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012485|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC057235|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK313603|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC030505|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK302975|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK303616|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC070281|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC017793|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##U29343|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AF032862|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108904|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108905|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC107869|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK290577|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.104311	
chr9	89049001	89049122	reg1010006.p1	10.465	+	TSC_hg19_v1_chr9_-_88969326 AL832193 CR936608 AK055546 CR933644 AL832026 BX641077 CR933643 BC111003 NM_001185059 NM_001185074 NM_024617	-79688	-	AK308352 TSC_hg19_v1_chr9_-_88969321 BC032456	-79772	-	AB528754 AM393721 TSC_hg19_v1_chr9_-_88897454 BC053900 BC071621 AY015642 AL834356 AF284752 BC002675 AK055643 AK225937 AK309289 NM_030940	-151617	-	L13698 NM_002048	513042	-	AK127445 NM_001001709 BC132741 BC136791 HQ258059	714540	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	1063525	+	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC053900|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC071621|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AY015642|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AL834356|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AF284752|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC002675|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK055643|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK225937|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##NM_030940|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##L13698|GAS1|2619|growth arrest-specific 1##NM_002048|GAS1|2619|growth arrest-specific 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1	0.802423	CTCF.p2:0:0.802
chr3	46419967	46420098	reg1013216.p1	10.464	+	NM_000579 NM_001100168	-8400	+	TSC_hg19_v1_chr3_+_46395601 AK292920 U03905	-24425	+	AK292685 NM_001123041 NM_001123396	-24803	+	AF015525 NM_003965 AF014958 BC071682 BC025717 BC096075 BC096076 BC099623 AK296673 NM_001130910 AK313312 AF015524	28864	+	AK316330 U84119 AK298035 NM_001199149	85086	-	M83205 X52941 AF332168 AY137470 AY178998 AY875691 DQ522304 EU779935 AB527812 AY360320 DQ892855 DQ896102 M83202 M93150 AY165046 AK290859 AK292813 AK303889 BC015822 BC022347 BC015823 AY493417 NM_002343 X53961	86465	-	NM_000579|CCR5|1234|chemokine (C-C motif) receptor 5##NM_001100168|CCR5|1234|chemokine (C-C motif) receptor 5##AK292920|CCR2|729230|chemokine (C-C motif) receptor 2##U03905|CCR2|729230|chemokine (C-C motif) receptor 2##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2##AF015525|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_003965|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC071682|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC096075|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC096076|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK296673|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_001130910|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK313312|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AF015524|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK316330|LTF|4057|lactotransferrin##U84119|LTF|4057|lactotransferrin##AK298035|LTF|4057|lactotransferrin##NM_001199149|LTF|4057|lactotransferrin##M83205|LTF|4057|lactotransferrin##X52941|LTF|4057|lactotransferrin##AF332168|LTF|4057|lactotransferrin##AY137470|LTF|4057|lactotransferrin##AY178998|LTF|4057|lactotransferrin##AY875691|LTF|4057|lactotransferrin##DQ522304|LTF|4057|lactotransferrin##EU779935|LTF|4057|lactotransferrin##AY360320|LTF|4057|lactotransferrin##DQ892855|LTF|4057|lactotransferrin##DQ896102|LTF|4057|lactotransferrin##M83202|LTF|4057|lactotransferrin##M93150|LTF|4057|lactotransferrin##AY165046|LTF|4057|lactotransferrin##AK290859|LTF|4057|lactotransferrin##AK292813|LTF|4057|lactotransferrin##AK303889|LTF|4057|lactotransferrin##BC015822|LTF|4057|lactotransferrin##BC022347|LTF|4057|lactotransferrin##BC015823|LTF|4057|lactotransferrin##AY493417|LTF|4057|lactotransferrin##NM_002343|LTF|4057|lactotransferrin##X53961|LTF|4057|lactotransferrin	0.132848	
chr18	20379116	20379260	reg1009382.p1	10.463	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	-381363	-	X95701 BC027891 NM_005257 TSC_hg19_v1_chr18_+_19749549	-629712	+	AK123079 TSC_hg19_v1_chr18_-_19749029	-630202	-	TSC_hg19_v1_chr18_+_20513319 NM_002894 U72066 AK292481	134160	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	134627	+	EF028204 NM_001100619	336538	+	HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##X95701|GATA6|2627|GATA binding protein 6##BC027891|GATA6|2627|GATA binding protein 6##NM_005257|GATA6|2627|GATA binding protein 6##AK123079|LOC100128893|100128893|uncharacterized LOC100128893##NM_002894|RBBP8|5932|retinoblastoma binding protein 8##U72066|RBBP8|5932|retinoblastoma binding protein 8##AK292481|RBBP8|5932|retinoblastoma binding protein 8##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	0.757724	CTCF.p2:-6:0.758
chr21	15492550	15492663	reg1008138.p1	10.463	+	TSC_hg19_v1_chr21_+_15399763 BC070147 BC024173 BC048201	-92842	+	AY172978 NM_174981 AY465173	-510107	+	BC101132 BC101133 BC101134 BC107038 BC107039 BC113810 AF218570 AF339514 AF339515 AF339516 NM_181704 NM_182481 NM_182482 NM_182484 AF527550 AF527551 AF527553 NM_001187 U19180 BC017024 TSC_hg19_v1_chr21_-_11098961 AK292540 BC064647	-4393707	-	AB463838 AY197607 NM_198996	86642	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	95891	+	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	262867	-	AY172978|POTED|317754|POTE ankyrin domain family, member D##NM_174981|POTED|317754|POTE ankyrin domain family, member D##AY465173|POTEB|339010|POTE ankyrin domain family, member B##BC101132|BAGE2|85319|B melanoma antigen family, member 2##BC101133|BAGE2|85319|B melanoma antigen family, member 2##BC101134|BAGE3|85318|B melanoma antigen family, member 3##BC107038|BAGE|574|B melanoma antigen##BC107039|BAGE|574|B melanoma antigen##BC113810|BAGE|574|B melanoma antigen##AF218570|BAGE2|85319|B melanoma antigen family, member 2##AF339514|BAGE3|85318|B melanoma antigen family, member 3##AF339515|BAGE4|85317|B melanoma antigen family, member 4##AF339516|BAGE5|85316|B melanoma antigen family, member 5##NM_181704|BAGE4|85317|B melanoma antigen family, member 4##NM_182481|BAGE3|85318|B melanoma antigen family, member 3##NM_182482|BAGE2|85319|B melanoma antigen family, member 2##NM_182484|BAGE5|85316|B melanoma antigen family, member 5##AF527550|BAGE|574|B melanoma antigen##AF527551|BAGE|574|B melanoma antigen##AF527553|BAGE|574|B melanoma antigen##NM_001187|BAGE|574|B melanoma antigen##U19180|BAGE|574|B melanoma antigen##AK292540|BAGE2|85319|B melanoma antigen family, member 2##AY197607|LIPI|149998|lipase, member I##NM_198996|LIPI|149998|lipase, member I##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13	0.899858	CTCF.p2:-1:0.900
chr5	72379074	72379174	reg1008453.p1	10.463	+	TSC_hg19_v1_chr5_+_72251897 AK291782 BC006004 AK295141 BC014311 AL831971 AM393291 AM393840 CU676963	-127223	+	TSC_hg19_v1_chr5_+_72251873 AK056770	-127253	+	TSC_hg19_v1_chr5_+_72251813 BC137070 NM_001146032 NM_138782	-127339	+	TSC_hg19_v1_chr5_+_72416401 NM_001161342 NM_173490 BC018083	37312	+	AK315460 NM_153217 AK055830	89907	+	U13222 TSC_hg19_v1_chr5_-_72743884	364735	-	AK291782|FCHO2|115548|FCH domain only 2##BC006004|FCHO2|115548|FCH domain only 2##AK295141|FCHO2|115548|FCH domain only 2##BC014311|FCHO2|115548|FCH domain only 2##AL831971|FCHO2|115548|FCH domain only 2##AM393291|FCHO2|115548|FCH domain only 2##AM393840|FCHO2|115548|FCH domain only 2##BC137070|FCHO2|115548|FCH domain only 2##NM_001146032|FCHO2|115548|FCH domain only 2##NM_138782|FCHO2|115548|FCH domain only 2##NM_001161342|TMEM171|134285|transmembrane protein 171##NM_173490|TMEM171|134285|transmembrane protein 171##BC018083|TMEM171|134285|transmembrane protein 171##AK315460|TMEM174|134288|transmembrane protein 174##NM_153217|TMEM174|134288|transmembrane protein 174##AK055830|TMEM174|134288|transmembrane protein 174##U13222|FOXD1|2297|forkhead box D1	0.953694	CTCF.p2:-8:0.954
chr6	24525171	24525298	reg1011499.p1	10.463	+	TSC_hg19_v1_chr6_+_24495196 AK314357 BC034321 NM_001080 NM_170740 DQ891671 DQ894857 AJ427355 Y11192	-30039	+	TSC_hg19_v1_chr6_+_24495080 AK290800 AK294699 AK315380	-30156	+	L11702 CU676688 AY007546 BC093645 BC112001 L11701 AK310692 BC020748 NM_177483 AJ308108 NM_001503	-35441	-	AK310289 NM_001252328	58220	-	AK296310 AK295008 AK307503 AK296426 BC140821 BC144628 NM_001168375 NM_001168376 TSC_hg19_v1_chr6_-_24646374 AB002317 BC152460 NM_001168374 NM_001168377 NM_014809	120934	-	AJ420495 TSC_hg19_v1_chr6_-_24667106 AK296623 AB587417 AK002168 EU446614 BC110375 AF223469 AJ269473 AF201687 BC017553 NM_016614 AK308836	141736	-	AK314357|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##BC034321|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_001080|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_170740|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ891671|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ894857|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AJ427355|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##Y11192|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK290800|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK294699|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK315380|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##L11702|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AY007546|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC093645|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC112001|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##L11701|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310692|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC020748|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_177483|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AJ308108|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_001503|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310289|KIAA0319|9856|KIAA0319##NM_001252328|KIAA0319|9856|KIAA0319##AK296310|KIAA0319|9856|KIAA0319##AK295008|KIAA0319|9856|KIAA0319##AK307503|KIAA0319|9856|KIAA0319##AK296426|KIAA0319|9856|KIAA0319##BC140821|KIAA0319|9856|KIAA0319##BC144628|KIAA0319|9856|KIAA0319##NM_001168375|KIAA0319|9856|KIAA0319##NM_001168376|KIAA0319|9856|KIAA0319##AB002317|KIAA0319|9856|KIAA0319##BC152460|KIAA0319|9856|KIAA0319##NM_001168374|KIAA0319|9856|KIAA0319##NM_001168377|KIAA0319|9856|KIAA0319##NM_014809|KIAA0319|9856|KIAA0319##AJ420495|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK296623|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK002168|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##EU446614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC110375|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF223469|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AJ269473|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF201687|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC017553|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##NM_016614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK308836|TDP2|51567|tyrosyl-DNA phosphodiesterase 2	0.965559	CTCF.p2:-5:0.966
chr20	34472309	34472417	reg1010257.p1	10.462	+	TSC_hg19_v1_chr20_+_34359958 BC093405 NM_016436 BC062681 AF258787 AY134747 AK054597 BC150178 AF220416 AK314503 BC080598 BC015538 BC016948 BC048210 BC006415	-112418	+	TSC_hg19_v1_chr20_-_34330183 NM_001242599 NM_001242600 NM_004902 NM_184234	-142143	-	BX537770 TSC_hg19_v1_chr20_-_34330177	-142186	-	AB464702 AM392883 AM393129 CR457188 EU446495 TSC_hg19_v1_chr20_-_34542233	69872	-	TSC_hg19_v1_chr20_-_34542404 AF204271 BC000785 AF207829 NM_033630	70103	-	NM_016558	70917	-	BC093405|PHF20|51230|PHD finger protein 20##NM_016436|PHF20|51230|PHD finger protein 20##BC062681|PHF20|51230|PHD finger protein 20##AF258787|PHF20|51230|PHD finger protein 20##AY134747|PHF20|51230|PHD finger protein 20##AK054597|PHF20|51230|PHD finger protein 20##BC150178|PHF20|51230|PHD finger protein 20##AF220416|PHF20|51230|PHD finger protein 20##AK314503|PHF20|51230|PHD finger protein 20##BC080598|PHF20|51230|PHD finger protein 20##BC016948|PHF20|51230|PHD finger protein 20##BC048210|PHF20|51230|PHD finger protein 20##BC006415|PHF20|51230|PHD finger protein 20##NM_001242599|RBM39|9584|RNA binding motif protein 39##NM_001242600|RBM39|9584|RNA binding motif protein 39##NM_004902|RBM39|9584|RNA binding motif protein 39##NM_184234|RBM39|9584|RNA binding motif protein 39##BX537770|RBM39|9584|RNA binding motif protein 39##AM392883|SCAND1|51282|SCAN domain containing 1##AM393129|SCAND1|51282|SCAN domain containing 1##CR457188|SCAND1|51282|SCAN domain containing 1##EU446495|SCAND1|51282|SCAN domain containing 1##AF204271|SCAND1|51282|SCAN domain containing 1##BC000785|SCAND1|51282|SCAN domain containing 1##AF207829|SCAND1|51282|SCAN domain containing 1##NM_033630|SCAND1|51282|SCAN domain containing 1##NM_016558|SCAND1|51282|SCAN domain containing 1	0.950016	CTCF.p2:-1:0.950
chr11	6704720	6704858	reg1009427.p2	10.461	+	TSC_hg19_v1_chr11_-_6704541 CR457177 DQ891581 DQ894774 DQ895036 AB463889 BC012306 AK026857 AF164797 AF141338 NM_022061	-215	-	TSC_hg19_v1_chr11_-_6676982 AB053446 NM_003737	-27826	-	TSC_hg19_v1_chr11_-_6643809 BC038382	-60928	-	NM_001004490 BC140734	85447	-	BC151143 NM_001004489	101458	+	BC101489 BC101491 NM_003696	112286	-	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17##DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17##DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17##DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17##BC012306|MRPL17|63875|mitochondrial ribosomal protein L17##AK026857|MRPL17|63875|mitochondrial ribosomal protein L17##AF164797|MRPL17|63875|mitochondrial ribosomal protein L17##AF141338|MRPL17|63875|mitochondrial ribosomal protein L17##NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17##AB053446|DCHS1|8642|dachsous 1 (Drosophila)##NM_003737|DCHS1|8642|dachsous 1 (Drosophila)##BC038382|DCHS1|8642|dachsous 1 (Drosophila)##NM_001004490|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC140734|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC151143|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##NM_001004489|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	0.532341	CTCF.p2:-5:0.532
chr11	18672847	18672977	reg1012366.p1	10.460	+	TSC_hg19_v1_chr11_-_18655962 BX647798 NM_194285 AK096760	-16912	-	TSC_hg19_v1_chr11_-_18655926 AK304078 BX648478	-16971	-	TSC_hg19_v1_chr11_-_18655915 BC056261 BX641102	-17007	-	TSC_hg19_v1_chr11_+_18720321 AK074600	47391	+	TSC_hg19_v1_chr11_+_18720347 BC035692 NM_153347	47436	+	BC115396 BC115397 AK095113 NM_173588	74835	-	BX647798|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##NM_194285|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##AK096760|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##AK304078|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##BX648478|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##BC056261|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##BX641102|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##AK074600|TMEM86A|144110|transmembrane protein 86A##BC035692|TMEM86A|144110|transmembrane protein 86A##NM_153347|TMEM86A|144110|transmembrane protein 86A##BC115396|IGSF22|283284|immunoglobulin superfamily, member 22##BC115397|IGSF22|283284|immunoglobulin superfamily, member 22##AK095113|IGSF22|283284|immunoglobulin superfamily, member 22##NM_173588|IGSF22|283284|immunoglobulin superfamily, member 22	0.994727	CTCF.p2:7:0.995
chr19	29370211	29370327	reg1011456.p1	10.460	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-1085341	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-1085436	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-1085881	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	333791	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	333852	-	NM_001146339	647221	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.983847	CTCF.p2:5:0.984
chr2	236655085	236655223	reg1012380.p1	10.460	+	TSC_hg19_v1_chr2_+_236403297 AB384114 AF413078	-251844	+	TSC_hg19_v1_chr2_+_236402950 BC140856	-252177	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	-252351	+	AK311262 TSC_hg19_v1_chr2_-_237076045	420860	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	421478	-	NM_212556 BX647589	517840	-	AF413078|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18	0.233956	CTCF.p2:3:0.234
chr5	146938547	146938676	reg1011479.p1	10.460	+	BC077077 NM_001197294 TSC_hg19_v1_chr5_-_146889632	-48985	-	EU007906 CU687310 EU832163 EU832257 TSC_hg19_v1_chr5_-_146889506	-49145	-	CU691634 AB384367 EU832180 EU832273 TSC_hg19_v1_chr5_-_146833229 BC039006 D78014 AK297223 NM_001387 Y07818	-105346	-	BC003189 AB011127 TSC_hg19_v1_chr5_-_147162128 AK291280	223483	-	BC017354 TSC_hg19_v1_chr5_-_147162218	223592	-	AF273057 NM_014790 TSC_hg19_v1_chr5_-_147162254	223643	-	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3##EU007906|DPYSL3|1809|dihydropyrimidinase-like 3##EU832163|DPYSL3|1809|dihydropyrimidinase-like 3##EU832257|DPYSL3|1809|dihydropyrimidinase-like 3##EU832180|DPYSL3|1809|dihydropyrimidinase-like 3##EU832273|DPYSL3|1809|dihydropyrimidinase-like 3##BC039006|DPYSL3|1809|dihydropyrimidinase-like 3##D78014|DPYSL3|1809|dihydropyrimidinase-like 3##AK297223|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3##Y07818|DPYSL3|1809|dihydropyrimidinase-like 3##BC003189|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AB011127|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AK291280|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##BC017354|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AF273057|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##NM_014790|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	0.979134	CTCF.p2:20:0.979
chr1	32211344	32211481	reg1010092.p2	10.459	+	TSC_hg19_v1_chr1_-_32169619 NM_001856	-41719	-	M92642 TSC_hg19_v1_chr1_-_32169608	-41830	-	NM_012392	-100575	-	AB005298 NM_001703	18229	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	52828	-	TSC_hg19_v1_chr1_-_32264318 AK095829	52909	-	NM_001856|COL16A1|1307|collagen, type XVI, alpha 1##M92642|COL16A1|1307|collagen, type XVI, alpha 1##NM_012392|PEF1|553115|penta-EF-hand domain containing 1##AB005298|BAI2|576|brain-specific angiogenesis inhibitor 2##NM_001703|BAI2|576|brain-specific angiogenesis inhibitor 2##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1	0.914605	CTCF.p2:-2:0.915
chr12	3409757	3409922	reg1010721.p3	10.458	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-223277	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-340778	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-341245	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	190602	+	AK125333 TSC_hg19_v1_chr12_-_3601984	192146	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	452429	-	NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B	0.575412	CTCF.p2:5:0.575
chr17	38632550	38632649	reg1007173.p1	10.458	+	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-32780	+	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	-58475	-	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	-111653	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	25247	-	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	89119	-	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	171471	-	NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.092541	
chr3	112156552	112156690	reg1009896.p1	10.458	+	AL832529 AK129797 AK293399 BC031103 TSC_hg19_v1_chr3_+_112052024 AK074972	-104597	+	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	-104663	+	BC044801 NM_183061 AK128084	-143533	-	AK292692 NM_001085357 NM_181780	61774	-	AK307432 AB079384 CU692886 DQ893424 DQ896774 AF202092 TSC_hg19_v1_chr3_-_112280499 BC024221 NM_022488 AL137515	123821	-	TSC_hg19_v1_chr3_-_112280761 BC002830	124140	-	AL832529|CD200|4345|CD200 molecule##AK129797|CD200|4345|CD200 molecule##AK293399|CD200|4345|CD200 molecule##BC031103|CD200|4345|CD200 molecule##AK074972|CD200|4345|CD200 molecule##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule##BC044801|SLC9A10|285335|solute carrier family 9, member 10##NM_183061|SLC9A10|285335|solute carrier family 9, member 10##AK128084|SLC9A10|285335|solute carrier family 9, member 10##AK292692|BTLA|151888|B and T lymphocyte associated##NM_001085357|BTLA|151888|B and T lymphocyte associated##NM_181780|BTLA|151888|B and T lymphocyte associated##AK307432|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AB079384|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##DQ893424|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##DQ896774|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AF202092|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##BC024221|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##NM_022488|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AL137515|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##BC002830|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)	0.437768	CTCF.p2:21:0.438
chr9	80650431	80650567	reg1012357.p1	10.458	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-4315	-	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	-387268	-	AK027023 TSC_hg19_v1_chr9_+_79968352	-682151	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	200531	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	261559	+	TSC_hg19_v1_chr9_+_82186879 NM_007005	1536387	+	AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.961026	CTCF.p2:14:0.961
chr12	119851111	119851240	reg1012510.p1	10.456	+	BC040553 NM_178499	-78659	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	-234496	+	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	-431828	+	NM_001136534 AK296289	180125	+	TSC_hg19_v1_chr12_+_120105769 AK312495 NM_006253 BC017671 AF022116 BC001007 BC001056 BC001823 BC018818 U83994 AK301165 Y12556 AB590811 AJ224515	254677	+	AK123136 TSC_hg19_v1_chr12_-_120241305	390122	-	BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##NM_001136534|TMEM233|387890|transmembrane protein 233##AK296289|TMEM233|387890|transmembrane protein 233##AK312495|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##NM_006253|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC017671|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AF022116|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001007|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001056|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001823|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC018818|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##U83994|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK301165|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##Y12556|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AJ224515|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK123136|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)	0.955456	CTCF.p2:-2:0.955
chr17	71185795	71185912	reg1009393.p1	10.456	+	TSC_hg19_v1_chr17_+_71161148 AK290745 BC019610 NM_001050 AK313866	-24709	+	TSC_hg19_v1_chr17_-_71088832 NM_001159770 NM_139177	-97005	-	BC035631 TSC_hg19_v1_chr17_-_71088831	-97022	-	TSC_hg19_v1_chr17_+_71189175 NM_018714	3307	+	TSC_hg19_v1_chr17_+_71189196 AK098224	3338	+	TSC_hg19_v1_chr17_+_71189203 DQ896029 AB462989 BC021985 AB037802	3364	+	AK290745|SSTR2|6752|somatostatin receptor 2##BC019610|SSTR2|6752|somatostatin receptor 2##NM_001050|SSTR2|6752|somatostatin receptor 2##AK313866|SSTR2|6752|somatostatin receptor 2##NM_001159770|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##NM_139177|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##NM_018714|COG1|9382|component of oligomeric golgi complex 1##AK098224|COG1|9382|component of oligomeric golgi complex 1##DQ896029|COG1|9382|component of oligomeric golgi complex 1##BC021985|COG1|9382|component of oligomeric golgi complex 1##AB037802|COG1|9382|component of oligomeric golgi complex 1	0.447976	CTCF.p2:37:0.448
chr2	98885774	98885894	reg1011550.p1	10.456	+	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	-182188	+	TSC_hg19_v1_chr2_-_98612395 AK098792	-273431	-	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	-273648	-	DQ426863 NM_001079878 NM_001298 DQ067460	76799	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	77071	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	175524	+	NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B##AK098792|TMEM131|23505|transmembrane protein 131##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa	0.706469	CTCF.p2:-4:0.706
chr5	63931059	63931186	reg1012820.p1	10.456	+	BC140707 NM_001029875 BX640900	-128641	+	TSC_hg19_v1_chr5_+_63461666 AK090756 AX746601 NM_001113561 NM_178532 BC101277 BC101278 BC101279 AL832580 BC101397	-469441	+	AK314187 TSC_hg19_v1_chr5_-_63258084	-673100	-	NM_001164442 TSC_hg19_v1_chr5_+_63986235	55063	+	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	133324	-	TSC_hg19_v1_chr5_-_64064491 AK094073 AX748442 NM_173829	133382	-	BC140707|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001029875|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##BX640900|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##AK090756|RNF180|285671|ring finger protein 180##NM_001113561|RNF180|285671|ring finger protein 180##NM_178532|RNF180|285671|ring finger protein 180##BC101277|RNF180|285671|ring finger protein 180##BC101278|RNF180|285671|ring finger protein 180##BC101279|RNF180|285671|ring finger protein 180##AL832580|RNF180|285671|ring finger protein 180##BC101397|RNF180|285671|ring finger protein 180##AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_001164442|FAM159B|100132916|family with sequence similarity 159, member B##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1##AK094073|SREK1IP1|285672|SREK1-interacting protein 1##NM_173829|SREK1IP1|285672|SREK1-interacting protein 1	0.987121	CTCF.p2:-21:0.987
chr2	850253	850394	reg1012714.p1	10.455	+	TSC_hg19_v1_chr2_-_677406 BC016010 AL137269 NM_152834	-172912	-	BC033490 NM_001002919	-562079	-	TSC_hg19_v1_chr2_+_264946 NM_001040649 NM_004300 NM_007099 AK289934 M83653 BC020699 AK291861 BC007422 AB209838 BC106011 AB385551 BT007136 Y16846 M83654 M87546 S62885	-585411	+	TSC_hg19_v1_chr2_+_946534 BC035783 NM_018968 AJ003029 BC125251	96256	+	BC063107 NM_000547 NM_001206744 NM_001206745 NM_175719 BC095448 M17755 J02969 J02970 X17358 Y00406	566932	+	NM_175721 NM_175722 AF439430 CU687644	567856	+	BC016010|TMEM18|129787|transmembrane protein 18##AL137269|TMEM18|129787|transmembrane protein 18##NM_152834|TMEM18|129787|transmembrane protein 18##BC033490|FAM150B|285016|family with sequence similarity 150, member B##NM_001002919|FAM150B|285016|family with sequence similarity 150, member B##NM_001040649|ACP1|52|acid phosphatase 1, soluble##NM_004300|ACP1|52|acid phosphatase 1, soluble##NM_007099|ACP1|52|acid phosphatase 1, soluble##AK289934|ACP1|52|acid phosphatase 1, soluble##M83653|ACP1|52|acid phosphatase 1, soluble##BC020699|ACP1|52|acid phosphatase 1, soluble##AK291861|ACP1|52|acid phosphatase 1, soluble##BC007422|ACP1|52|acid phosphatase 1, soluble##AB209838|ACP1|52|acid phosphatase 1, soluble##BC106011|ACP1|52|acid phosphatase 1, soluble##BT007136|ACP1|52|acid phosphatase 1, soluble##Y16846|ACP1|52|acid phosphatase 1, soluble##M83654|ACP1|52|acid phosphatase 1, soluble##M87546|ACP1|52|acid phosphatase 1, soluble##S62885|ACP1|52|acid phosphatase 1, soluble##BC035783|SNTG2|54221|syntrophin, gamma 2##NM_018968|SNTG2|54221|syntrophin, gamma 2##AJ003029|SNTG2|54221|syntrophin, gamma 2##BC125251|SNTG2|54221|syntrophin, gamma 2##BC063107|TPO|7173|thyroid peroxidase##NM_000547|TPO|7173|thyroid peroxidase##NM_001206744|TPO|7173|thyroid peroxidase##NM_001206745|TPO|7173|thyroid peroxidase##NM_175719|TPO|7173|thyroid peroxidase##BC095448|TPO|7173|thyroid peroxidase##M17755|TPO|7173|thyroid peroxidase##J02969|TPO|7173|thyroid peroxidase##J02970|TPO|7173|thyroid peroxidase##X17358|TPO|7173|thyroid peroxidase##Y00406|TPO|7173|thyroid peroxidase##NM_175721|TPO|7173|thyroid peroxidase##NM_175722|TPO|7173|thyroid peroxidase##AF439430|TPO|7173|thyroid peroxidase	0.998339	CTCF.p2:-19:0.998
chr9	19174326	19174479	reg1012008.p1	10.455	+	TSC_hg19_v1_chr9_-_19127517 AK297920 NM_001122	-46854	-	TSC_hg19_v1_chr9_-_19127491 BC005127 AK296125 AK312983	-46925	-	TSC_hg19_v1_chr9_-_19102926 AF533709	-71393	-	NM_017925 BC144484 BC144485	116349	+	TSC_hg19_v1_chr9_-_19378815 BC035447	204464	-	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	205825	-	AK297920|PLIN2|123|perilipin 2##NM_001122|PLIN2|123|perilipin 2##BC005127|PLIN2|123|perilipin 2##AK296125|PLIN2|123|perilipin 2##AK312983|PLIN2|123|perilipin 2##AF533709|HAUS6|54801|HAUS augmin-like complex, subunit 6##NM_017925|DENND4C|55667|DENN/MADD domain containing 4C##BC144484|DENND4C|55667|DENN/MADD domain containing 4C##BC144485|DENND4C|55667|DENN/MADD domain containing 4C##BC035447|RPS6|6194|ribosomal protein S6##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6	0.307944	CTCF.p2:41:0.308
chr15	64237566	64237746	reg1010502.p1	10.453	+	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-111516	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-111536	-	TSC_hg19_v1_chr15_-_64126081 U50078	-111572	-	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	100954	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	148441	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	150484	+	AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1	0.0	
chr7	148663961	148664123	reg1010146.p2	10.453	+	TSC_hg19_v1_chr7_-_148581422 AK303637 NM_001203247 NM_001203248 NM_004456 NM_152998	-82616	-	TSC_hg19_v1_chr7_-_148581380 AK314291	-82661	-	TSC_hg19_v1_chr7_-_148581377 AK293239 AK303585	-82665	-	CU674214 DQ893573 DQ894347 TSC_hg19_v1_chr7_-_148725561 BC000425 BC001928 J05016 AK290971	61513	-	BC006344 BC011754 AK313299 TSC_hg19_v1_chr7_-_148725753	61701	-	TSC_hg19_v1_chr7_-_148725766 NM_004911	61730	-	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_001203247|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_001203248|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4##DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4##BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4##BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4##AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4##BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4##BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4##AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4##NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4	0.996701	CTCF.p2:6:0.997
chrX	107315368	107315476	reg1010235.p1	10.453	+	BX648658 NM_001170553 NM_182607 AK301783 BC043216 BX640913 AK315846 AK301311 AK292472	-27163	+	BC150140 AF285598 NM_031273	-89829	-	TSC_hg19_v1_chrX_+_107069526 AF196481	-245850	+	AB528690 BT019689 GQ129344 GQ129345 AK295996 AK309326 TSC_hg19_v1_chrX_-_107334773 AB009619 AY057056 BC011960 AK058108 D83197 NM_002814 NM_170750	19389	-	BC061696 NM_052936 NM_178270 BC041862 AK293533 AJ504651 AK314429 AJ320508 AJ320509 AK054927	19545	+	BC140855 BC144669 BC000874 BC070203 NM_033641 D21337	366185	-	BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1##BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1##BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1##AF285598|TEX13B|56156|testis expressed 13B##NM_031273|TEX13B|56156|testis expressed 13B##AF196481|MID2|11043|midline 2##BT019689|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129344|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129345|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK295996|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK309326|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AB009619|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AY057056|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BC011960|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK058108|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##D83197|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_002814|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_170750|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BC061696|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##NM_052936|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##NM_178270|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##BC041862|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK293533|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ504651|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK314429|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ320508|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ320509|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK054927|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##BC140855|COL4A6|1288|collagen, type IV, alpha 6##BC144669|COL4A6|1288|collagen, type IV, alpha 6##BC000874|COL4A6|1288|collagen, type IV, alpha 6##BC070203|COL4A6|1288|collagen, type IV, alpha 6##NM_033641|COL4A6|1288|collagen, type IV, alpha 6##D21337|COL4A6|1288|collagen, type IV, alpha 6	0.904885	CTCF.p2:20:0.869
chr12	72740235	72740375	reg1008451.p1	10.452	+	TSC_hg19_v1_chr12_-_72667288 BC040230	-73035	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	-73801	+	AK095156 TSC_hg19_v1_chr12_-_72666355	-73962	-	NM_001136262 TSC_hg19_v1_chr12_+_74931614 AK056642	2191280	+	TSC_hg19_v1_chr12_+_74931622 BC009111 AL713650	2191334	+	AK054742 TSC_hg19_v1_chr12_+_74933681	2193315	+	BC040230|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AK095156|LOC283392|283392|uncharacterized LOC283392##NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B##AK056642|ATXN7L3B|552889|ataxin 7-like 3B##BC009111|ATXN7L3B|552889|ataxin 7-like 3B##AL713650|ATXN7L3B|552889|ataxin 7-like 3B	0.981365	CTCF.p2:0:0.981
chr17	38242828	38242959	reg1009787.p1	10.452	+	TSC_hg19_v1_chr17_+_38230679 J03239 DQ892512 DQ895726 AB307686 AB489181 CR541915 CU674114 HQ692859	-12184	+	TSC_hg19_v1_chr17_+_38219217 BC035137 NM_001190918 NM_003250 NM_199334 X55005 BC000261 BC002728 M24899 Y00479	-23720	+	AK290530 NM_001190919 AB209346	-24434	+	TSC_hg19_v1_chr17_-_38252967 AY429554	10088	-	M34339 X72631 TSC_hg19_v1_chr17_-_38256833 BC047875 AK315270 AK300155 BC056148	13829	-	TSC_hg19_v1_chr17_-_38256983 M24898 NM_021724	14081	-	J03239|THRA|7067|thyroid hormone receptor, alpha##DQ892512|THRA|7067|thyroid hormone receptor, alpha##DQ895726|THRA|7067|thyroid hormone receptor, alpha##AB307686|THRA|7067|thyroid hormone receptor, alpha##CR541915|THRA|7067|thyroid hormone receptor, alpha##HQ692859|THRA|7067|thyroid hormone receptor, alpha##BC035137|THRA|7067|thyroid hormone receptor, alpha##NM_001190918|THRA|7067|thyroid hormone receptor, alpha##NM_003250|THRA|7067|thyroid hormone receptor, alpha##NM_199334|THRA|7067|thyroid hormone receptor, alpha##X55005|THRA|7067|thyroid hormone receptor, alpha##BC000261|THRA|7067|thyroid hormone receptor, alpha##BC002728|THRA|7067|thyroid hormone receptor, alpha##M24899|THRA|7067|thyroid hormone receptor, alpha##Y00479|THRA|7067|thyroid hormone receptor, alpha##AK290530|THRA|7067|thyroid hormone receptor, alpha##NM_001190919|THRA|7067|thyroid hormone receptor, alpha##AB209346|THRA|7067|thyroid hormone receptor, alpha##AY429554|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##M24898|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##NM_021724|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	0.989676	CTCF.p2:-6:0.990
chr2	216134673	216134816	reg1012525.p1	10.452	+	BC144073 AY219711 NM_173076	-131635	-	AY033486 NM_015657	-237935	-	AB590656 JF790283 JF790285 JF790287 TSC_hg19_v1_chr2_-_215674408 BC126426 BC126428 AX794378 JF790280 JF790281 JF790282 JF790284 U76638 AK314260 AK301843 JF790286 AK223409 NM_000465	-460385	-	NM_004044 TSC_hg19_v1_chr2_+_216176781 AK313066 D82348 AK298142	41994	+	D89976 TSC_hg19_v1_chr2_+_216176813	42068	+	TSC_hg19_v1_chr2_+_216176824 AB062403 BC008879 AB590190 DQ893262 DQ896591 CU679167	42097	+	BC144073|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##AY219711|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_173076|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##AY033486|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_015657|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##JF790283|BARD1|580|BRCA1 associated RING domain 1##JF790285|BARD1|580|BRCA1 associated RING domain 1##JF790287|BARD1|580|BRCA1 associated RING domain 1##BC126426|BARD1|580|BRCA1 associated RING domain 1##BC126428|BARD1|580|BRCA1 associated RING domain 1##AX794378|BARD1|580|BRCA1 associated RING domain 1##JF790280|BARD1|580|BRCA1 associated RING domain 1##JF790281|BARD1|580|BRCA1 associated RING domain 1##JF790282|BARD1|580|BRCA1 associated RING domain 1##JF790284|BARD1|580|BRCA1 associated RING domain 1##U76638|BARD1|580|BRCA1 associated RING domain 1##AK314260|BARD1|580|BRCA1 associated RING domain 1##AK301843|BARD1|580|BRCA1 associated RING domain 1##JF790286|BARD1|580|BRCA1 associated RING domain 1##AK223409|BARD1|580|BRCA1 associated RING domain 1##NM_000465|BARD1|580|BRCA1 associated RING domain 1##NM_004044|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK313066|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##D82348|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK298142|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##D89976|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AB062403|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##BC008879|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##DQ893262|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##DQ896591|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase	0.996542	CTCF.p2:13:0.997
chr1	155017518	155017630	reg1010426.p1	10.451	+	AK301935 NM_001143687 NM_152494 AK057347 AK301902 AK301876 BC064844	-11211	+	BC111794 AK057496 NM_144622	-11329	-	NM_001252406 TSC_hg19_v1_chr1_+_154975235 AK304762	-42327	+	TSC_hg19_v1_chr1_+_155023771 AK000667 AY560593 AY560594 AY560595 AY560596 AY560597 AY560598 AY560599 AY560600 AY560601 AY576417 NM_003815 NM_207191 NM_207194 NM_207195 NM_207196 NM_207197	6185	+	BC014566 TSC_hg19_v1_chr1_+_155023791 AK075498	6218	+	TSC_hg19_v1_chr1_+_155023819 AK308172 AK295614 AK296925 AK297468 U41767 EU176173 AB590397 AY518542 BT009764 U46005	6262	+	AK301935|DCST1|149095|DC-STAMP domain containing 1##NM_001143687|DCST1|149095|DC-STAMP domain containing 1##NM_152494|DCST1|149095|DC-STAMP domain containing 1##AK057347|DCST1|149095|DC-STAMP domain containing 1##AK301902|DCST1|149095|DC-STAMP domain containing 1##AK301876|DCST1|149095|DC-STAMP domain containing 1##BC064844|DCST1|149095|DC-STAMP domain containing 1##BC111794|DCST2|127579|DC-STAMP domain containing 2##AK057496|DCST2|127579|DC-STAMP domain containing 2##NM_144622|DCST2|127579|DC-STAMP domain containing 2##NM_001252406|ZBTB7B|51043|zinc finger and BTB domain containing 7B##AK304762|ZBTB7B|51043|zinc finger and BTB domain containing 7B##AK000667|ADAM15|8751|ADAM metallopeptidase domain 15##AY560593|ADAM15|8751|ADAM metallopeptidase domain 15##AY560594|ADAM15|8751|ADAM metallopeptidase domain 15##AY560595|ADAM15|8751|ADAM metallopeptidase domain 15##AY560596|ADAM15|8751|ADAM metallopeptidase domain 15##AY560597|ADAM15|8751|ADAM metallopeptidase domain 15##AY560598|ADAM15|8751|ADAM metallopeptidase domain 15##AY560599|ADAM15|8751|ADAM metallopeptidase domain 15##AY560600|ADAM15|8751|ADAM metallopeptidase domain 15##AY560601|ADAM15|8751|ADAM metallopeptidase domain 15##AY576417|ADAM15|8751|ADAM metallopeptidase domain 15##NM_003815|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207191|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207194|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207195|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207196|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207197|ADAM15|8751|ADAM metallopeptidase domain 15##BC014566|ADAM15|8751|ADAM metallopeptidase domain 15##AK075498|ADAM15|8751|ADAM metallopeptidase domain 15##AK308172|ADAM15|8751|ADAM metallopeptidase domain 15##AK295614|ADAM15|8751|ADAM metallopeptidase domain 15##AK296925|ADAM15|8751|ADAM metallopeptidase domain 15##AK297468|ADAM15|8751|ADAM metallopeptidase domain 15##U41767|ADAM15|8751|ADAM metallopeptidase domain 15##EU176173|ADAM15|8751|ADAM metallopeptidase domain 15##AY518542|ADAM15|8751|ADAM metallopeptidase domain 15##BT009764|ADAM15|8751|ADAM metallopeptidase domain 15##U46005|ADAM15|8751|ADAM metallopeptidase domain 15	0.997055	CTCF.p2:-4:0.997
chr22	19935385	19935503	reg1011339.p1	10.451	+	TSC_hg19_v1_chr22_-_19929453 AF106697	-5964	-	TSC_hg19_v1_chr22_-_19929342 AF044212 NM_006440	-6099	-	TSC_hg19_v1_chr22_-_19929330 AB019694 AF201385 BC099923 AK097708 BC038708 AF171054	-6117	-	NM_001135161 AK129492	3072	+	NM_001135162 BC100018	3604	+	AB462972 BT007125 CR456997 CU012983 CU013271 CU680120 DQ893411 DQ896732 FJ410132 TSC_hg19_v1_chr22_+_19950078 NM_007310 EF217321 EF217322 EF212883 FJ410131 CU674210	14738	+	AF106697|TXNRD2|10587|thioredoxin reductase 2##AF044212|TXNRD2|10587|thioredoxin reductase 2##NM_006440|TXNRD2|10587|thioredoxin reductase 2##AB019694|TXNRD2|10587|thioredoxin reductase 2##AF201385|TXNRD2|10587|thioredoxin reductase 2##BC099923|TXNRD2|10587|thioredoxin reductase 2##AK097708|TXNRD2|10587|thioredoxin reductase 2##BC038708|TXNRD2|10587|thioredoxin reductase 2##AF171054|TXNRD2|10587|thioredoxin reductase 2##NM_001135161|COMT|1312|catechol-O-methyltransferase##NM_001135162|COMT|1312|catechol-O-methyltransferase##BC100018|COMT|1312|catechol-O-methyltransferase##BT007125|COMT|1312|catechol-O-methyltransferase##CR456997|COMT|1312|catechol-O-methyltransferase##CU012983|COMT|1312|catechol-O-methyltransferase##CU013271|COMT|1312|catechol-O-methyltransferase##DQ893411|COMT|1312|catechol-O-methyltransferase##DQ896732|COMT|1312|catechol-O-methyltransferase##FJ410132|COMT|1312|catechol-O-methyltransferase##NM_007310|COMT|1312|catechol-O-methyltransferase##EF217321|COMT|1312|catechol-O-methyltransferase##EF217322|COMT|1312|catechol-O-methyltransferase##FJ410131|COMT|1312|catechol-O-methyltransferase	0.694154	CTCF.p2:13:0.694
chr7	30840442	30840575	reg1012578.p1	10.451	+	TSC_hg19_v1_chr7_+_30811046 AK026027 NM_032222 AF538962 BC043210 BC098569	-29472	+	TSC_hg19_v1_chr7_+_30791750 AF128846 AF128847 BC106902 BC106903 NM_001199219 NM_006774 AK308762 AK313832 AB590719 BC103712 BC033813	-48752	+	AF361106 AF361107 Y10151 Y10152 Y10153 AF011406 NM_001202475 NM_001202481 AF361108	-100806	-	NM_198098 TSC_hg19_v1_chr7_+_30951467 AK298091 AK298313 AK300995 AK304684 AK312656 AK301351 BC022486 M77829 S73482 U41517 DQ892366 DQ895575 CU692648 AB463415 AB451275 AB451402	110961	+	AK309608 NM_001185060 AK309691 AK309688 NM_001185061 NM_001185062	120508	+	L01406 L09237 NM_000823 AY557192	163151	+	AK026027|FAM188B|84182|family with sequence similarity 188, member B##NM_032222|FAM188B|84182|family with sequence similarity 188, member B##AF538962|FAM188B|84182|family with sequence similarity 188, member B##BC043210|FAM188B|84182|family with sequence similarity 188, member B##BC098569|FAM188B|84182|family with sequence similarity 188, member B##AF128846|INMT|11185|indolethylamine N-methyltransferase##AF128847|INMT|11185|indolethylamine N-methyltransferase##BC106902|INMT|11185|indolethylamine N-methyltransferase##BC106903|INMT|11185|indolethylamine N-methyltransferase##NM_001199219|INMT|11185|indolethylamine N-methyltransferase##NM_006774|INMT|11185|indolethylamine N-methyltransferase##AK308762|INMT-FAM188B|100526825|INMT-FAM188B readthrough (non-protein coding)##AK313832|INMT|11185|indolethylamine N-methyltransferase##BC103712|INMT|11185|indolethylamine N-methyltransferase##BC033813|INMT|11185|indolethylamine N-methyltransferase##AF361106|CRHR2|1395|corticotropin releasing hormone receptor 2##AF361107|CRHR2|1395|corticotropin releasing hormone receptor 2##Y10151|CRHR2|1395|corticotropin releasing hormone receptor 2##Y10152|CRHR2|1395|corticotropin releasing hormone receptor 2##Y10153|CRHR2|1395|corticotropin releasing hormone receptor 2##AF011406|CRHR2|1395|corticotropin releasing hormone receptor 2##NM_001202475|CRHR2|1395|corticotropin releasing hormone receptor 2##NM_001202481|CRHR2|1395|corticotropin releasing hormone receptor 2##AF361108|CRHR2|1395|corticotropin releasing hormone receptor 2##NM_198098|AQP1|358|aquaporin 1 (Colton blood group)##AK298091|AQP1|358|aquaporin 1 (Colton blood group)##AK298313|AQP1|358|aquaporin 1 (Colton blood group)##AK300995|AQP1|358|aquaporin 1 (Colton blood group)##AK304684|AQP1|358|aquaporin 1 (Colton blood group)##AK312656|AQP1|358|aquaporin 1 (Colton blood group)##AK301351|AQP1|358|aquaporin 1 (Colton blood group)##BC022486|AQP1|358|aquaporin 1 (Colton blood group)##M77829|AQP1|358|aquaporin 1 (Colton blood group)##S73482|AQP1|358|aquaporin 1 (Colton blood group)##U41517|AQP1|358|aquaporin 1 (Colton blood group)##DQ892366|AQP1|358|aquaporin 1 (Colton blood group)##DQ895575|AQP1|358|aquaporin 1 (Colton blood group)##AB451275|AQP1|358|aquaporin 1 (Colton blood group)##AB451402|AQP1|358|aquaporin 1 (Colton blood group)##AK309608|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185060|AQP1|358|aquaporin 1 (Colton blood group)##AK309691|AQP1|358|aquaporin 1 (Colton blood group)##AK309688|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185061|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185062|AQP1|358|aquaporin 1 (Colton blood group)##L01406|GHRHR|2692|growth hormone releasing hormone receptor##L09237|GHRHR|2692|growth hormone releasing hormone receptor##NM_000823|GHRHR|2692|growth hormone releasing hormone receptor##AY557192|GHRHR|2692|growth hormone releasing hormone receptor	0.997234	CTCF.p2:-2:0.997
chr5	79777242	79777375	reg1011806.p1	10.450	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	-73455	+	NM_032567 AK098575 AK314007 AF333098 BC033798	-161493	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	-225423	-	AY358256 NM_205548 BC142990 TSC_hg19_v1_chr5_+_79783828 BC131563	6525	+	TSC_hg19_v1_chr5_+_79796130 AB055763	18821	+	BC137441 BC137442 CR749535 TSC_hg19_v1_chr5_-_79866099	88784	-	NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##AY358256|FAM151B|167555|family with sequence similarity 151, member B##NM_205548|FAM151B|167555|family with sequence similarity 151, member B##BC142990|FAM151B|167555|family with sequence similarity 151, member B##BC131563|FAM151B|167555|family with sequence similarity 151, member B##BC137441|ANKRD34B|340120|ankyrin repeat domain 34B##BC137442|ANKRD34B|340120|ankyrin repeat domain 34B##CR749535|ANKRD34B|340120|ankyrin repeat domain 34B	0.989223	CTCF.p2:-4:0.989
chr6	147178715	147178840	reg1010279.p1	10.449	+	AK097570 NM_024694 AL832192	-258640	+	TSC_hg19_v1_chr6_+_146864968 AK312202 U71127 AB529170 CU677203 DQ892882 DQ896131 AF498958 BT020016 U59878	-313769	+	BC015061 NM_006834 TSC_hg19_v1_chr6_+_146864864	-313908	+	TSC_hg19_v1_chr6_+_147524880 BC043645	346097	+	NM_001127715 NM_139244 AL834152 BC107737 BC113382 BC113408	346779	+	TSC_hg19_v1_chr6_+_147527118 AK128121	348333	+	AK097570|C6orf103|79747|chromosome 6 open reading frame 103##NM_024694|C6orf103|79747|chromosome 6 open reading frame 103##AL832192|C6orf103|79747|chromosome 6 open reading frame 103##AK312202|RAB32|10981|RAB32, member RAS oncogene family##U71127|RAB32|10981|RAB32, member RAS oncogene family##DQ892882|RAB32|10981|RAB32, member RAS oncogene family##DQ896131|RAB32|10981|RAB32, member RAS oncogene family##AF498958|RAB32|10981|RAB32, member RAS oncogene family##BT020016|RAB32|10981|RAB32, member RAS oncogene family##U59878|RAB32|10981|RAB32, member RAS oncogene family##BC015061|RAB32|10981|RAB32, member RAS oncogene family##NM_006834|RAB32|10981|RAB32, member RAS oncogene family##BC043645|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001127715|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_139244|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AL834152|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC107737|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113382|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113408|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AK128121|STXBP5|134957|syntaxin binding protein 5 (tomosyn)	1.025105	CTCF.p2:-13:1.000
chrX	152201104	152201236	reg1011606.p1	10.449	+	NM_001184924	-38500	-	BC101111 BC101112 BC101113 BC101114 AK295446 AK316104 AB067521 AY121806 NM_001103150 NM_001103151 NM_052926	-40488	-	NM_001178115 AK095258	-90941	+	NM_013364 TSC_hg19_v1_chrX_+_152224838 AK312299	23634	+	TSC_hg19_v1_chrX_+_152224862 AL136878	23697	+	NM_001242319 AK289879 NM_001170944 NM_032882 AK055322	39625	+	NM_001184924|PNMA5|114824|paraneoplastic antigen like 5##BC101111|PNMA5|114824|paraneoplastic antigen like 5##BC101112|PNMA5|114824|paraneoplastic antigen like 5##BC101113|PNMA5|114824|paraneoplastic antigen like 5##AK295446|PNMA5|114824|paraneoplastic antigen like 5##AK316104|PNMA5|114824|paraneoplastic antigen like 5##AB067521|PNMA5|114824|paraneoplastic antigen like 5##AY121806|PNMA5|114824|paraneoplastic antigen like 5##NM_001103150|PNMA5|114824|paraneoplastic antigen like 5##NM_001103151|PNMA5|114824|paraneoplastic antigen like 5##NM_052926|PNMA5|114824|paraneoplastic antigen like 5##NM_001178115|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK095258|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_013364|PNMA3|29944|paraneoplastic antigen MA3##AK312299|PNMA3|29944|paraneoplastic antigen MA3##AL136878|PNMA3|29944|paraneoplastic antigen MA3##NM_001242319|PNMA6D|100287466|paraneoplastic antigen like 6D##AK289879|PNMA6C|100287428|paraneoplastic antigen like 6C##NM_001170944|PNMA6C|100287428|paraneoplastic antigen like 6C##NM_032882|PNMA6A|84968|paraneoplastic antigen like 6A##AK055322|PNMA6C|100287428|paraneoplastic antigen like 6C	0.583365	CTCF.p2:2:0.583
chr1	74969952	74970064	reg1010167.p2	10.448	+	NM_015978 AF116826 AK307984 BC113539 BC117262 AY303691 HQ258528	-268906	+	NM_001112808 NM_001199327 NM_001199328 NM_001199329 NM_003838 TSC_hg19_v1_chr1_+_74663927 BC020720 AK294948 AF017445 AK304490 BC032865 AK223254 BC032308 AK299468	-306072	+	AK131476 BC020778 BX647210 TSC_hg19_v1_chr1_-_74663861 NM_001105659	-306160	-	AK127470 NM_001002912	169413	-	TSC_hg19_v1_chr1_-_75198733 AK128794 BX647883 BC039578 AK223150 AK223201 AB209714 AK314813 BC070058	228704	-	NM_001162916 AK098237 BC071765 NM_138467 AK294264 AK299849 BC009514 AK311272 AB590606	228872	+	NM_015978|TNNI3K|51086|TNNI3 interacting kinase##AF116826|TNNI3K|51086|TNNI3 interacting kinase##AK307984|TNNI3K|51086|TNNI3 interacting kinase##BC113539|TNNI3K|51086|TNNI3 interacting kinase##BC117262|TNNI3K|51086|TNNI3 interacting kinase##AY303691|TNNI3K|51086|TNNI3 interacting kinase##HQ258528|TNNI3K|51086|TNNI3 interacting kinase##NM_001112808|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199327|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199328|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_001199329|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_003838|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC020720|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK294948|FPGT|8790|fucose-1-phosphate guanylyltransferase##AF017445|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK304490|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032865|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##AK223254|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032308|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK299468|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK131476|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BC020778|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BX647210|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001105659|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##AK127470|C1orf173|127254|chromosome 1 open reading frame 173##NM_001002912|C1orf173|127254|chromosome 1 open reading frame 173##AK128794|CRYZ|1429|crystallin, zeta (quinone reductase)##BX647883|CRYZ|1429|crystallin, zeta (quinone reductase)##BC039578|CRYZ|1429|crystallin, zeta (quinone reductase)##AK223150|CRYZ|1429|crystallin, zeta (quinone reductase)##AK223201|CRYZ|1429|crystallin, zeta (quinone reductase)##AB209714|CRYZ|1429|crystallin, zeta (quinone reductase)##AK314813|CRYZ|1429|crystallin, zeta (quinone reductase)##BC070058|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001162916|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK098237|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC071765|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##NM_138467|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK294264|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK299849|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC009514|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK311272|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	0.0388	
chr21	27173973	27174116	reg1011767.p1	10.448	+	TSC_hg19_v1_chr21_-_27107965 NM_001003696 NM_001003697 NM_001003701 NM_001003703 NM_001685 BC001178	-66073	-	U13044 TSC_hg19_v1_chr21_+_27107734	-66278	+	TSC_hg19_v1_chr21_+_27107724 BC035031 D13318 AK223164	-66346	+	S41242 S41243 TSC_hg19_v1_chr21_-_27253245	79179	-	TSC_hg19_v1_chr21_-_27372469 X06981 X06982	198435	-	TSC_hg19_v1_chr21_-_27423435 BC018937	249399	-	NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa##BC035031|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa##D13318|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa##AK223164|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa##S41243|APP|351|amyloid beta (A4) precursor protein##X06981|APP|351|amyloid beta (A4) precursor protein##X06982|APP|351|amyloid beta (A4) precursor protein	0.9825	CTCF.p2:18:0.983
chr3	133096357	133096494	reg1012577.p1	10.448	+	TSC_hg19_v1_chr3_+_132757234 AY358381 BC000568	-339191	+	NM_001136469 NM_023943 TSC_hg19_v1_chr3_+_132757202	-339238	+	AB082531 NM_153240 TSC_hg19_v1_chr3_-_132441315	-655117	-	NM_003571 BC113518 BC113520 HQ258421 U48224	22433	+	TSC_hg19_v1_chr3_+_133292443 NM_001134422 NM_017548	196051	+	TSC_hg19_v1_chr3_+_133292588 AF103803	196147	+	AY358381|TMEM108|66000|transmembrane protein 108##BC000568|TMEM108|66000|transmembrane protein 108##NM_001136469|TMEM108|66000|transmembrane protein 108##NM_023943|TMEM108|66000|transmembrane protein 108##AB082531|NPHP3-ACAD11|100532724|NPHP3-ACAD11 readthrough##NM_153240|NPHP3|27031|nephronophthisis 3 (adolescent)##NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin##HQ258421|BFSP2|8419|beaded filament structural protein 2, phakinin##U48224|BFSP2|8419|beaded filament structural protein 2, phakinin##NM_001134422|CDV3|55573|CDV3 homolog (mouse)##NM_017548|CDV3|55573|CDV3 homolog (mouse)##AF103803|CDV3|55573|CDV3 homolog (mouse)	0.06667	
chr17	74835929	74836060	reg1013042.p1	10.447	+	TSC_hg19_v1_chr17_+_74734111 AK308058 AF015184 AK000233	-101841	+	AF015183 NM_001242532 NM_001242533 NM_001242535 NM_001242536 NM_001242537 NM_024311	-102469	+	TSC_hg19_v1_chr17_-_74733465 AK124792 NM_001195427 NM_003016	-102538	-	TSC_hg19_v1_chr17_+_74864556 AK057861 AB235153 BC041577 NM_001199172 NM_144677 BC062354	28672	+	AB114297 NM_198955 BC144361	32766	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	248803	+	AK308058|MFSD11|79157|major facilitator superfamily domain containing 11##AF015184|MFSD11|79157|major facilitator superfamily domain containing 11##AK000233|MFSD11|79157|major facilitator superfamily domain containing 11##AF015183|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242532|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242533|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242535|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242536|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242537|MFSD11|79157|major facilitator superfamily domain containing 11##NM_024311|MFSD11|79157|major facilitator superfamily domain containing 11##AK124792|SRSF2|6427|serine/arginine-rich splicing factor 2##NM_001195427|SRSF2|6427|serine/arginine-rich splicing factor 2##NM_003016|SRSF2|6427|serine/arginine-rich splicing factor 2##AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338	0.0	
chr3	85870415	85870548	reg1013986.p1	10.447	+	AF538973 NM_153184	-94850	+	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	-862352	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-3835179	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	1169770	-	BC094780 TSC_hg19_v1_chr3_-_87040272	1169789	-	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	1406054	+	AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B	0.998128	CTCF.p2:0:0.998
chr8	102313697	102313838	reg1012040.p1	10.447	+	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	-95813	-	TSC_hg19_v1_chr8_-_102217877 NM_001042511	-95891	-	BC035233 TSC_hg19_v1_chr8_-_102217845 BC015925 AF125099 AF275802 AF275809 AK290477 BC068524	-96074	-	TSC_hg19_v1_chr8_+_102504667 NM_024915 AK296817 AK310221	190898	+	TSC_hg19_v1_chr8_+_102504840 AK023844 AK292853 BC069618 BC069633 BC069638 BC129822 BC129823	191143	+	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	489416	-	NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706##NM_001042511|ZNF706|51123|zinc finger protein 706##BC035233|ZNF706|51123|zinc finger protein 706##BC015925|ZNF706|51123|zinc finger protein 706##AF125099|ZNF706|51123|zinc finger protein 706##AF275802|ZNF706|51123|zinc finger protein 706##AF275809|ZNF706|51123|zinc finger protein 706##AK290477|ZNF706|51123|zinc finger protein 706##BC068524|ZNF706|51123|zinc finger protein 706##NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta	0.942899	CTCF.p2:20:0.943
chr1	203413565	203413688	reg1011579.p1	10.446	+	TSC_hg19_v1_chr1_-_203320290 NM_002023	-93338	-	AK172740 TSC_hg19_v1_chr1_-_203320256	-93365	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	-93417	-	NM_002725 NM_201348 TSC_hg19_v1_chr1_+_203444937	31283	+	U29089 BC032498 TSC_hg19_v1_chr1_+_203444965	31334	+	AJ133790 AY077681 NM_014359 AF161702	49655	+	NM_002023|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin##NM_002725|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_201348|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##U29089|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##BC032498|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin	0.266596	CTCF.p2:9:0.267
chr1	228688773	228688912	reg1009452.p1	10.446	+	TSC_hg19_v1_chr1_+_228675088 NM_001010858 BC012758	-13767	+	AK091220 NM_175055 BC100855 BC100856 BC100857 BC100858 BC137467 BC137468	-43035	+	AB590632 BC082269 BC001193 NM_033445 AK311930 TSC_hg19_v1_chr1_-_228645575	-43296	-	AK055963 TSC_hg19_v1_chr1_+_228783500	94589	+	TSC_hg19_v1_chr1_+_228870806 NM_021205 AF211836	182002	+	TSC_hg19_v1_chr1_+_228871199 AB209511 AK289971 BC040076 AF282258 AB074878 AB051826 AF378087	182457	+	NM_001010858|RNF187|149603|ring finger protein 187##BC012758|RNF187|149603|ring finger protein 187##AK091220|HIST3H2BB|128312|histone cluster 3, H2bb##NM_175055|HIST3H2BB|128312|histone cluster 3, H2bb##BC100855|HIST3H2BB|128312|histone cluster 3, H2bb##BC100856|HIST3H2BB|128312|histone cluster 3, H2bb##BC100857|HIST3H2BB|128312|histone cluster 3, H2bb##BC100858|HIST3H2BB|128312|histone cluster 3, H2bb##BC137467|HIST3H2BB|128312|histone cluster 3, H2bb##BC137468|HIST3H2BB|128312|histone cluster 3, H2bb##BC082269|HIST3H2A|92815|histone cluster 3, H2a##BC001193|HIST3H2A|92815|histone cluster 3, H2a##NM_033445|HIST3H2A|92815|histone cluster 3, H2a##AK311930|HIST3H2A|92815|histone cluster 3, H2a##AK055963|DUSP5P|574029|dual specificity phosphatase 5 pseudogene##NM_021205|RHOU|58480|ras homolog gene family, member U##AF211836|RHOU|58480|ras homolog gene family, member U##AB209511|RHOU|58480|ras homolog gene family, member U##AK289971|RHOU|58480|ras homolog gene family, member U##BC040076|RHOU|58480|ras homolog gene family, member U##AF282258|RHOU|58480|ras homolog gene family, member U##AB074878|RHOU|58480|ras homolog gene family, member U##AB051826|RHOU|58480|ras homolog gene family, member U##AF378087|RHOU|58480|ras homolog gene family, member U	0.568731	CTCF.p2:-28:0.569
chr14	24906006	24906153	reg1010366.p2	10.445	+	TSC_hg19_v1_chr14_+_24899159 NM_015299 AK291680 BX161465 BC042554	-6909	+	AY359070 NM_001039771	-7349	-	TSC_hg19_v1_chr14_+_24868230 BC065283 NM_025081 AK021873	-37823	+	BX161384 TSC_hg19_v1_chr14_-_24911979 BC008566 AF226050 AK123513 BC000989 NM_020195	5815	-	AK056368 TSC_hg19_v1_chr14_+_24912196	6109	+	DQ082727 DQ082729 AB451464 AB590823 CU686784 M69136 BC069110 BC069370 BC069490 BC103974 BC103975 NM_001836	71366	-	NM_015299|KHNYN|23351|KH and NYN domain containing##AK291680|KHNYN|23351|KH and NYN domain containing##BX161465|KHNYN|23351|KH and NYN domain containing##BC042554|KHNYN|23351|KH and NYN domain containing##AY359070|CBLN3|643866|cerebellin 3 precursor##NM_001039771|CBLN3|643866|cerebellin 3 precursor##BC065283|NYNRIN|57523|NYN domain and retroviral integrase containing##NM_025081|NYNRIN|57523|NYN domain and retroviral integrase containing##AK021873|NYNRIN|57523|NYN domain and retroviral integrase containing##BX161384|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##BC008566|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##AF226050|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##AK123513|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##BC000989|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##NM_020195|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##DQ082727|CMA1|1215|chymase 1, mast cell##DQ082729|CMA1|1215|chymase 1, mast cell##AB451464|CMA1|1215|chymase 1, mast cell##M69136|CMA1|1215|chymase 1, mast cell##BC069110|CMA1|1215|chymase 1, mast cell##BC069370|CMA1|1215|chymase 1, mast cell##BC069490|CMA1|1215|chymase 1, mast cell##BC103974|CMA1|1215|chymase 1, mast cell##BC103975|CMA1|1215|chymase 1, mast cell##NM_001836|CMA1|1215|chymase 1, mast cell	0.154237	
chr8	37978252	37978367	reg1009963.p1	10.445	+	NM_001105214 AK291938 AF056717 BC015936	-14907	+	TSC_hg19_v1_chr8_+_37963046 AK291750 AK293699 AB020982 AF056718 AK298483 AB385056 AK311336	-15225	+	NM_004674 TSC_hg19_v1_chr8_+_37963033	-15288	+	CU679741 CR456803 CR541850 DQ891806 DQ894990 BC010550 AF035277 TSC_hg19_v1_chr8_-_38008471 U17280 AK315122 BX647744 AK090513 S79669 NM_000349	30156	-	AB527991 BC001767 TSC_hg19_v1_chr8_-_38034002 AF000177 AK312159 AJ238094	55625	-	TSC_hg19_v1_chr8_+_38034068 BC000800 NM_001204878 NM_004874	55785	+	NM_001105214|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK291938|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AF056717|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##BC015936|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK291750|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK293699|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AB020982|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AF056718|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK298483|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK311336|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##NM_004674|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##CR456803|STAR|6770|steroidogenic acute regulatory protein##CR541850|STAR|6770|steroidogenic acute regulatory protein##DQ891806|STAR|6770|steroidogenic acute regulatory protein##DQ894990|STAR|6770|steroidogenic acute regulatory protein##BC010550|STAR|6770|steroidogenic acute regulatory protein##AF035277|STAR|6770|steroidogenic acute regulatory protein##U17280|STAR|6770|steroidogenic acute regulatory protein##AK315122|STAR|6770|steroidogenic acute regulatory protein##BX647744|STAR|6770|steroidogenic acute regulatory protein##AK090513|STAR|6770|steroidogenic acute regulatory protein##S79669|STAR|6770|steroidogenic acute regulatory protein##NM_000349|STAR|6770|steroidogenic acute regulatory protein##BC001767|LSM1|27257|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF000177|LSM1|27257|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312159|LSM1|27257|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238094|LSM1|27257|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC000800|BAG4|9530|BCL2-associated athanogene 4##NM_001204878|BAG4|9530|BCL2-associated athanogene 4##NM_004874|BAG4|9530|BCL2-associated athanogene 4	0.972231	CTCF.p2:-13:0.972
chr14	81930966	81931088	reg1009837.p1	10.444	+	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-66201	-	D14886 NM_201595	-243453	-	D14887 TSC_hg19_v1_chr14_-_81687285 NM_015859 BC050703	-243747	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	69121	-	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	69200	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	4065446	+	HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##D14886|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_201595|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.998724	CTCF.p2:7:0.999
chrX	70872438	70872553	reg1010298.p1	10.444	+	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	-34163	-	NM_052957	-74622	+	TSC_hg19_v1_chrX_+_70765496 AL050366	-106973	+	NM_001145139 NM_001145140	65639	-	NM_001145139 NM_001145140	110644	+	TSC_hg19_v1_chrX_+_71130694 NM_001013627	258283	+	AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_052957|ACRC|93953|acidic repeat containing##AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001013627|NHSL2|340527|NHS-like 2	0.82611	CTCF.p2:18:0.826
chr13	51486240	51486391	reg1009920.p1	10.443	+	BC001397 BC005088 BC007332 BC010174 TSC_hg19_v1_chr13_+_51484193	-2158	+	TSC_hg19_v1_chr13_+_51483926 AK021774 AK223340 BC036744	-2361	+	TSC_hg19_v1_chr13_+_51483905 AY764036	-2411	+	TSC_hg19_v1_chr13_+_51796507 BC034497 NM_001242312 NM_145019 AK055269 AK096364 BC051771 AB527542 CU690842	310201	+	AX772926 NM_001101320 AM402969	428880	+	AF097645 BC039829 BC018725 BC013358 BC032386 TSC_hg19_v1_chr13_-_52027173 AK296801 AK304218	540838	-	BC001397|RNASEH2B|79621|ribonuclease H2, subunit B##BC005088|RNASEH2B|79621|ribonuclease H2, subunit B##BC007332|RNASEH2B|79621|ribonuclease H2, subunit B##BC010174|RNASEH2B|79621|ribonuclease H2, subunit B##AK021774|RNASEH2B|79621|ribonuclease H2, subunit B##AK223340|RNASEH2B|79621|ribonuclease H2, subunit B##BC036744|RNASEH2B|79621|ribonuclease H2, subunit B##AY764036|RNASEH2B|79621|ribonuclease H2, subunit B##BC034497|FAM124A|220108|family with sequence similarity 124A##NM_001242312|FAM124A|220108|family with sequence similarity 124A##NM_145019|FAM124A|220108|family with sequence similarity 124A##AK055269|FAM124A|220108|family with sequence similarity 124A##AK096364|FAM124A|220108|family with sequence similarity 124A##BC051771|FAM124A|220108|family with sequence similarity 124A##AX772926|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##NM_001101320|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AM402969|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AF097645|INTS6|26512|integrator complex subunit 6##BC039829|INTS6|26512|integrator complex subunit 6##BC018725|INTS6|26512|integrator complex subunit 6##BC013358|INTS6|26512|integrator complex subunit 6##BC032386|INTS6|26512|integrator complex subunit 6##AK296801|INTS6|26512|integrator complex subunit 6##AK304218|INTS6|26512|integrator complex subunit 6	0.990735	CTCF.p2:35:0.991
chr2	38543021	38543157	reg1011302.p1	10.443	+	AK316179 TSC_hg19_v1_chr2_-_38525609	-17520	-	TSC_hg19_v1_chr2_-_38303315 AK312686 NM_000104	-239769	-	U03688 BC012049 TSC_hg19_v1_chr2_-_38303294 AK297039 AK303862	-239807	-	TSC_hg19_v1_chr2_-_38604411 BC053508 AK026946 AK225190 AK303985 AK308894	61315	-	TSC_hg19_v1_chr2_-_38604430 NM_001135673 NM_022374	61342	-	TSC_hg19_v1_chr2_-_38829619 CU675994	286602	-	AK316179|ATL2|64225|atlastin GTPase 2##AK312686|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_000104|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##U03688|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##BC012049|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK303862|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##BC053508|ATL2|64225|atlastin GTPase 2##AK026946|ATL2|64225|atlastin GTPase 2##AK225190|ATL2|64225|atlastin GTPase 2##AK303985|ATL2|64225|atlastin GTPase 2##AK308894|ATL2|64225|atlastin GTPase 2##NM_001135673|ATL2|64225|atlastin GTPase 2##NM_022374|ATL2|64225|atlastin GTPase 2	0.932744	CTCF.p2:-25:0.933
chr7	19753423	19753566	reg1013170.p1	10.443	+	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	-4848	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	-568481	-	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	-596216	-	BX648384 NM_152774	58909	-	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	503486	-	AK295044 TSC_hg19_v1_chr7_+_20370337	616843	+	HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##AK295044|ITGB8|3696|integrin, beta 8	0.99753	CTCF.p2:-4:0.998
chr19	40257470	40257561	reg1009965.p2	10.442	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	-28876	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	-62472	+	FJ613352 NM_001190441	-110970	+	NM_001143832	9718	+	TSC_hg19_v1_chr19_-_40324779 AF205861 BC025291 AK074971 BC009688 AK302127 BC018751 NM_004714 NM_006483 NM_006484 Y17999	67283	-	BC019609 BC015218 TSC_hg19_v1_chr19_-_40331308 AB451384 BT006830 BT020144 CR457069	73776	-	FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001143832|LEUTX|342900|leucine twenty homeobox##AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC019609|FBL|2091|fibrillarin##BC015218|FBL|2091|fibrillarin##AB451384|FBL|2091|fibrillarin##BT006830|FBL|2091|fibrillarin##BT020144|FBL|2091|fibrillarin##CR457069|FBL|2091|fibrillarin	0.990467	CTCF.p2:12:0.990
chr4	186055715	186055842	reg1009367.p2	10.442	+	BC140795 BC144567 BC144568 BC144569 NM_001029887	-115740	+	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	-308544	-	TSC_hg19_v1_chr4_-_185747123 L09229 AK292798	-308677	-	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	8692	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	69366	-	NM_031953	75505	+	BC140795|HELT|391723|helt bHLH transcription factor##BC144567|HELT|391723|helt bHLH transcription factor##BC144569|HELT|391723|helt bHLH transcription factor##NM_001029887|HELT|391723|helt bHLH transcription factor##AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##L09229|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK292798|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430##NM_031953|SNX25|83891|sorting nexin 25	0.996923	CTCF.p2:-4:0.997
chr4	9383098	9383220	reg1012068.p1	10.442	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-18306	+	AF544012 BC100991 NM_001105662	-23051	+	BC100993 AF544011 AF544012 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-27797	+	AF529414 NM_001040448	63100	+	NM_000798	400098	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	639965	-	BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF544012|USP17|391627|ubiquitin specific peptidase 17##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##NM_000798|DRD5|1816|dopamine receptor D5##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.992615	CTCF.p2:0:0.977
chr11	1474952	1475097	reg1010306.p1	10.441	+	TSC_hg19_v1_chr11_+_1463679 AK074411 AK297306	-11308	+	TSC_hg19_v1_chr11_+_1411225 AY166857 NM_003957 AF533876 AF533877 AF533878 AF533879 AF533880	-63829	+	TSC_hg19_v1_chr11_+_1331080 BC042808 BC066355	-143933	+	AB066564 NM_001172223 AK296658	32868	-	NM_004420 U27193 TSC_hg19_v1_chr11_-_1593332	118217	-	AB528866 AB126070 NM_001005922	131472	-	AK074411|BRSK2|9024|BR serine/threonine kinase 2##AK297306|BRSK2|9024|BR serine/threonine kinase 2##AY166857|BRSK2|9024|BR serine/threonine kinase 2##NM_003957|BRSK2|9024|BR serine/threonine kinase 2##AF533876|BRSK2|9024|BR serine/threonine kinase 2##AF533877|BRSK2|9024|BR serine/threonine kinase 2##AF533878|BRSK2|9024|BR serine/threonine kinase 2##AF533879|BRSK2|9024|BR serine/threonine kinase 2##AF533880|BRSK2|9024|BR serine/threonine kinase 2##BC042808|LOC255512|255512|uncharacterized LOC255512##BC066355|LOC255512|255512|uncharacterized LOC255512##AB066564|MOB2|81532|MOB kinase activator 2##NM_001172223|MOB2|81532|MOB kinase activator 2##AK296658|MOB2|81532|MOB kinase activator 2##NM_004420|DUSP8|1850|dual specificity phosphatase 8##U27193|DUSP8|1850|dual specificity phosphatase 8##AB126070|KRTAP5-1|387264|keratin associated protein 5-1##NM_001005922|KRTAP5-1|387264|keratin associated protein 5-1	0.991232	CTCF.p2:1:0.572	CTCF.p2:-77:0.337
chr1	149764552	149764668	reg1009061.p2	10.441	+	X14355 AK311303 NM_000566 X14356 AK291451 BC032634 AB527585 BC152383 CU689454 DQ890842 DQ893997 L03418	-10338	+	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	-211587	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	-365414	-	BC110793 AK289664 AK299108 AK296916 NM_001024599 NM_001161334	19308	-	NM_001123375	20625	-	AK316561 NM_001034077 NM_003548 BC093969 BC112193 BC108260 BC019846 AB590914 CR542172	39624	+	X14355|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##NM_000566|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##X14356|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK291451|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC032634|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC152383|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ890842|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ893997|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##L03418|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##AK289664|HIST2H2BF|440689|histone cluster 2, H2bf##AK299108|HIST2H2BF|440689|histone cluster 2, H2bf##AK296916|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001161334|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001123375|HIST2H3D|653604|histone cluster 2, H3d##NM_001034077|HIST2H4B|554313|histone cluster 2, H4b##NM_003548|HIST2H4A|8370|histone cluster 2, H4a##BC093969|HIST2H4A|8370|histone cluster 2, H4a##BC112193|HIST2H4A|8370|histone cluster 2, H4a##BC108260|HIST2H4A|8370|histone cluster 2, H4a##BC019846|HIST2H4A|8370|histone cluster 2, H4a##CR542172|HIST2H4A|8370|histone cluster 2, H4a	0.997973	CTCF.p2:7:0.998
chr15	48404568	48404699	reg1011668.p1	10.441	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	-393948	+	TSC_hg19_v1_chr15_+_48009541 AK290032	-395045	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	-928246	+	AF348468 NM_205850 BC110836 BC113628 BC113630 BC143950 DQ665306 DQ665307 HQ258279	8571	+	AF190159 TSC_hg19_v1_chr15_-_48470320 AF106685	65696	-	TSC_hg19_v1_chr15_-_48470503 AB037762 BC152420 BC152451 BC068523 AK023133 NM_016132	65884	-	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF348468|SLC24A5|283652|solute carrier family 24, member 5##NM_205850|SLC24A5|283652|solute carrier family 24, member 5##BC113628|SLC24A5|283652|solute carrier family 24, member 5##BC113630|SLC24A5|283652|solute carrier family 24, member 5##BC143950|SLC24A5|283652|solute carrier family 24, member 5##DQ665306|SLC24A5|283652|solute carrier family 24, member 5##DQ665307|SLC24A5|283652|solute carrier family 24, member 5##HQ258279|SLC24A5|283652|solute carrier family 24, member 5##AF190159|MYEF2|50804|myelin expression factor 2##AF106685|MYEF2|50804|myelin expression factor 2##AB037762|MYEF2|50804|myelin expression factor 2##BC152420|MYEF2|50804|myelin expression factor 2##BC152451|MYEF2|50804|myelin expression factor 2##BC068523|MYEF2|50804|myelin expression factor 2##AK023133|MYEF2|50804|myelin expression factor 2##NM_016132|MYEF2|50804|myelin expression factor 2	0.438333	CTCF.p2:-12:0.438
chr20	17919791	17919935	reg1012335.p1	10.441	+	BC054871 NM_001014977 NM_178477 BC062735	-239265	+	NM_001159495	-245544	+	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	-256980	-	BT007191 AB464237 TSC_hg19_v1_chr20_-_17949155 AK223308 AK001793 AK129505 NM_014426 BC093623 BC093980 BC143274	29351	-	TSC_hg19_v1_chr20_-_17949438 BC002724 BC062638 BC064555 BC073171 AK123903 AK308017 AK296947 BC000100 AF121855 NM_152227	29577	-	TSC_hg19_v1_chr20_+_17949742 AF306686 AK315532 AF306684 AF306685 AK027503 BC016869 NM_052865	29799	+	BC054871|BANF2|140836|barrier to autointegration factor 2##NM_001014977|BANF2|140836|barrier to autointegration factor 2##NM_178477|BANF2|140836|barrier to autointegration factor 2##BC062735|BANF2|140836|barrier to autointegration factor 2##NM_001159495|BANF2|140836|barrier to autointegration factor 2##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BT007191|SNX5|27131|sorting nexin 5##AK223308|SNX5|27131|sorting nexin 5##AK001793|SNX5|27131|sorting nexin 5##AK129505|SNX5|27131|sorting nexin 5##NM_014426|SNX5|27131|sorting nexin 5##BC093623|SNX5|27131|sorting nexin 5##BC093980|SNX5|27131|sorting nexin 5##BC143274|SNX5|27131|sorting nexin 5##BC002724|SNX5|27131|sorting nexin 5##BC062638|SNX5|27131|sorting nexin 5##AK123903|SNX5|27131|sorting nexin 5##AK308017|SNX5|27131|sorting nexin 5##AK296947|SNX5|27131|sorting nexin 5##BC000100|SNX5|27131|sorting nexin 5##AF121855|SNX5|27131|sorting nexin 5##NM_152227|SNX5|27131|sorting nexin 5##AF306686|C20orf72|92667|chromosome 20 open reading frame 72##AK315532|C20orf72|92667|chromosome 20 open reading frame 72##AF306684|C20orf72|92667|chromosome 20 open reading frame 72##AF306685|C20orf72|92667|chromosome 20 open reading frame 72##AK027503|C20orf72|92667|chromosome 20 open reading frame 72##BC016869|C20orf72|92667|chromosome 20 open reading frame 72##NM_052865|C20orf72|92667|chromosome 20 open reading frame 72	0.10886	
chr22	46409373	46409513	reg1011469.p1	10.441	+	AF416743 NM_058238 TSC_hg19_v1_chr22_-_46373045	-36414	-	CR456568 TSC_hg19_v1_chr22_+_46067931 AK095309 CR457381 DQ893240 DQ896570	-341526	+	AK025734 TSC_hg19_v1_chr22_+_46067746 AF119662 BC007508	-341687	+	TSC_hg19_v1_chr22_+_46449736 BC036832	40281	+	AB528792 AK001807 NM_018280 TSC_hg19_v1_chr22_-_46450052	40569	-	NM_001001928 NM_005036 AY258330 TSC_hg19_v1_chr22_+_46546555 AY258328	137087	+	AF416743|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_058238|WNT7B|7477|wingless-type MMTV integration site family, member 7B##CR456568|ATXN10|25814|ataxin 10##AK095309|ATXN10|25814|ataxin 10##CR457381|ATXN10|25814|ataxin 10##DQ893240|ATXN10|25814|ataxin 10##DQ896570|ATXN10|25814|ataxin 10##AK025734|ATXN10|25814|ataxin 10##AF119662|ATXN10|25814|ataxin 10##BC007508|ATXN10|25814|ataxin 10##AK001807|C22orf26|55267|chromosome 22 open reading frame 26##NM_018280|C22orf26|55267|chromosome 22 open reading frame 26##NM_001001928|PPARA|5465|peroxisome proliferator-activated receptor alpha##NM_005036|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258330|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258328|PPARA|5465|peroxisome proliferator-activated receptor alpha	0.016976	
chr15	39000176	39000291	reg1010331.p1	10.440	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-11435	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-143302	-	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-253888	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	542692	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	873096	+	AK093308 AX748045 BC045191 NM_152597	1074795	-	AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.369038	CTCF.p2:-11:0.369
chr18	54243410	54243554	reg1012330.p1	10.440	+	AB527692 BC031056 NM_001243226	-940324	-	AK315074 AK299169 NM_001243227 NM_001243228	-986444	-	FR748206 FR748216 TSC_hg19_v1_chr18_-_53255849 AK122765 NM_001083962 NM_001243230 NM_003199	-987685	-	AB209263 DQ891846 DQ895034 EU176640 TSC_hg19_v1_chr18_-_54305824 AF051896 AF052659 AK313653	62265	-	TSC_hg19_v1_chr18_-_54305956 BC001156 AF003938 NM_004786	62432	-	TSC_hg19_v1_chr18_+_54318593 AK057141 NM_015285 NM_052834 AB011113 BC150282	75124	+	BC031056|TCF4|6925|transcription factor 4##NM_001243226|TCF4|6925|transcription factor 4##AK315074|TCF4|6925|transcription factor 4##AK299169|TCF4|6925|transcription factor 4##NM_001243227|TCF4|6925|transcription factor 4##NM_001243228|TCF4|6925|transcription factor 4##FR748216|TCF4|6925|transcription factor 4##AK122765|TCF4|6925|transcription factor 4##NM_001083962|TCF4|6925|transcription factor 4##NM_001243230|TCF4|6925|transcription factor 4##NM_003199|TCF4|6925|transcription factor 4##AB209263|TXNL1|9352|thioredoxin-like 1##DQ891846|TXNL1|9352|thioredoxin-like 1##DQ895034|TXNL1|9352|thioredoxin-like 1##EU176640|TXNL1|9352|thioredoxin-like 1##AF051896|TXNL1|9352|thioredoxin-like 1##AF052659|TXNL1|9352|thioredoxin-like 1##AK313653|TXNL1|9352|thioredoxin-like 1##BC001156|TXNL1|9352|thioredoxin-like 1##AF003938|TXNL1|9352|thioredoxin-like 1##NM_004786|TXNL1|9352|thioredoxin-like 1##AK057141|WDR7|23335|WD repeat domain 7##NM_015285|WDR7|23335|WD repeat domain 7##NM_052834|WDR7|23335|WD repeat domain 7##AB011113|WDR7|23335|WD repeat domain 7##BC150282|WDR7|23335|WD repeat domain 7	0.47018	CTCF.p2:9:0.470
chr2	144920392	144920523	reg1012692.p1	10.440	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	-1033466	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	-1033527	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-1285217	+	NM_024659	74448	-	AY281366 NM_001006636	131602	-	BC017741 AK291357 TSC_hg19_v1_chr2_-_145090037 BC061699	169575	-	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1##AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1##BC017741|GTDC1|79712|glycosyltransferase-like domain containing 1##AK291357|GTDC1|79712|glycosyltransferase-like domain containing 1##BC061699|GTDC1|79712|glycosyltransferase-like domain containing 1	0.0	
chr2	86263178	86263334	reg1010265.p2	10.440	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-147170	-	AY152815 NM_001042437	-168464	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-282251	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	69727	-	NM_015425	70021	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	70085	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.372137	CTCF.p2:39:0.372
chr8	54775957	54776115	reg1012793.p1	10.440	+	AY046538 NM_170587 AF366054 AF366055 AF366056	-11623	+	AF113222 TSC_hg19_v1_chr8_-_54755840 NM_015941 NM_213619 AK303229	-20184	-	AK022345 TSC_hg19_v1_chr8_-_54755834	-20209	-	TSC_hg19_v1_chr8_+_54793431 AK094503 BC063490 NM_003702 BC054867 BC018618 BC031328	17416	+	TSC_hg19_v1_chr8_+_54793579 AF060877 HQ257937 BC015614	17526	+	BT019995 CR542221 AB464783 AK290454 TSC_hg19_v1_chr8_-_54934848 X62585 BC072460 X57198 AK026617 AK297957 BX538034 AK297729	158731	-	AY046538|RGS20|8601|regulator of G-protein signaling 20##NM_170587|RGS20|8601|regulator of G-protein signaling 20##AF366054|RGS20|8601|regulator of G-protein signaling 20##AF366055|RGS20|8601|regulator of G-protein signaling 20##AF366056|RGS20|8601|regulator of G-protein signaling 20##AF113222|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_015941|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213619|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK303229|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK094503|RGS20|8601|regulator of G-protein signaling 20##BC063490|RGS20|8601|regulator of G-protein signaling 20##NM_003702|RGS20|8601|regulator of G-protein signaling 20##BC018618|RGS20|8601|regulator of G-protein signaling 20##BC031328|RGS20|8601|regulator of G-protein signaling 20##AF060877|RGS20|8601|regulator of G-protein signaling 20##HQ257937|RGS20|8601|regulator of G-protein signaling 20##BC015614|RGS20|8601|regulator of G-protein signaling 20##BT019995|TCEA1|6917|transcription elongation factor A (SII), 1##CR542221|TCEA1|6917|transcription elongation factor A (SII), 1##AK290454|TCEA1|6917|transcription elongation factor A (SII), 1##X62585|TCEA1|6917|transcription elongation factor A (SII), 1##BC072460|TCEA1|6917|transcription elongation factor A (SII), 1##X57198|TCEA1|6917|transcription elongation factor A (SII), 1##AK026617|TCEA1|6917|transcription elongation factor A (SII), 1##AK297957|TCEA1|6917|transcription elongation factor A (SII), 1##BX538034|TCEA1|6917|transcription elongation factor A (SII), 1##AK297729|TCEA1|6917|transcription elongation factor A (SII), 1	0.989479	CTCF.p2:-5:0.989
chr9	22470059	22470211	reg1013743.p1	10.440	+	AJ290954 TSC_hg19_v1_chr9_+_22447458 AK130018	-22686	+	AB464510 TSC_hg19_v1_chr9_+_22447162	-23022	+	TSC_hg19_v1_chr9_+_22446846 AK096011 NM_022160 BC130435 BC130437	-23298	+	BC030692 NM_001171197	1351342	-	TSC_hg19_v1_chr9_-_23821819 BC035004	1351678	-	BC042393 NM_001171195 TSC_hg19_v1_chr9_-_23821847	1351709	-	AJ290954|DMRTA1|63951|DMRT-like family A1##AK130018|DMRTA1|63951|DMRT-like family A1##AK096011|DMRTA1|63951|DMRT-like family A1##NM_022160|DMRTA1|63951|DMRT-like family A1##BC130435|DMRTA1|63951|DMRT-like family A1##BC130437|DMRTA1|63951|DMRT-like family A1##BC030692|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171197|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC035004|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC042393|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171195|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	0.956739	CTCF.p2:0:0.957
chr4	81287224	81287348	reg1011259.p1	10.439	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-30389	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	-99427	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	-168632	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	664856	+	AB528214 D70899 NM_006259 X94612	838921	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	1105697	-	BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B	0.814399	CTCF.p2:-17:0.814
chr7	91510076	91510211	reg1009885.p1	10.439	+	TSC_hg19_v1_chr7_-_91509979 BC108648 AL832861 AK298469 AK313641 NM_006980 Y09615 AK222730 AK311568	-128	-	TSC_hg19_v1_chr7_+_90893747 AB017363 NM_003505 AF072872 BC051271 AK314996	-616267	+	BC017719 TSC_hg19_v1_chr7_+_90893724	-616442	+	TSC_hg19_v1_chr7_+_91570181 NM_005751 NM_147185 AJ131693 AF026245 BC015533 AB019691 AY803272 CU677341	60138	+	AB590319 CU689330 DQ891311 DQ894495 TSC_hg19_v1_chr7_-_91763765 D55653 BC018429	253579	-	TSC_hg19_v1_chr7_-_91763792 AK314205 BC032322 U23942	253658	-	BC108648|MTERF|7978|mitochondrial transcription termination factor##AL832861|MTERF|7978|mitochondrial transcription termination factor##AK298469|MTERF|7978|mitochondrial transcription termination factor##AK313641|MTERF|7978|mitochondrial transcription termination factor##NM_006980|MTERF|7978|mitochondrial transcription termination factor##Y09615|MTERF|7978|mitochondrial transcription termination factor##AK222730|MTERF|7978|mitochondrial transcription termination factor##AB017363|FZD1|8321|frizzled family receptor 1##NM_003505|FZD1|8321|frizzled family receptor 1##AF072872|FZD1|8321|frizzled family receptor 1##BC051271|FZD1|8321|frizzled family receptor 1##AK314996|FZD1|8321|frizzled family receptor 1##BC017719|FZD1|8321|frizzled family receptor 1##NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##DQ891311|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##DQ894495|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##D55653|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##BC018429|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##AK314205|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##BC032322|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##U23942|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1	1.088007	CTCF.p2:-32:0.973
chr10	112653448	112653577	reg1010397.p2	10.438	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	-21798	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	-21900	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-249383	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	25184	-	TSC_hg19_v1_chr10_-_112678952 BC062778 AK021501 BC104248 BC104249 BC113000 BC113001 AK025724 BC105804 AK307314 BC073157 NM_001195304 NM_001195305 NM_001195307 NM_001243783	25500	-	TSC_hg19_v1_chr10_+_112679309 NM_007373	25783	+	AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1##BC062778|BBIP1|92482|BBSome interacting protein 1##AK021501|BBIP1|92482|BBSome interacting protein 1##BC104248|BBIP1|92482|BBSome interacting protein 1##BC104249|BBIP1|92482|BBSome interacting protein 1##BC113000|BBIP1|92482|BBSome interacting protein 1##BC113001|BBIP1|92482|BBSome interacting protein 1##AK025724|BBIP1|92482|BBSome interacting protein 1##BC105804|BBIP1|92482|BBSome interacting protein 1##AK307314|BBIP1|92482|BBSome interacting protein 1##BC073157|BBIP1|92482|BBSome interacting protein 1##NM_001195304|BBIP1|92482|BBSome interacting protein 1##NM_001195305|BBIP1|92482|BBSome interacting protein 1##NM_001195307|BBIP1|92482|BBSome interacting protein 1##NM_001243783|BBIP1|92482|BBSome interacting protein 1##NM_007373|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)	0.998979	CTCF.p2:0:0.999
chr15	71741069	71741212	reg1012749.p1	10.438	+	NM_024817 BC140868	-307330	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-333269	-	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	-556165	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	98440	+	AF121129 NM_014249 NM_016346 AF148128	361772	+	AK097557 NM_001166340	665458	+	NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49##AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8	0.899222	CTCF.p2:-16:0.899
chr18	21939836	21939930	reg1006435.p2	10.438	+	AK301862 NM_001242508	-48414	-	TSC_hg19_v1_chr18_-_21852189 AF274714 NM_018030	-87691	-	TSC_hg19_v1_chr18_-_21851919 AK001079	-87972	-	TSC_hg19_v1_chr18_-_21977762 BC136452 BC144117 BC041563 AK292895	37854	-	TSC_hg19_v1_chr18_-_21977789 AF323726 AF392450 AK096358 NM_080597	37948	-	TSC_hg19_v1_chr18_+_22006608 AK292533 NM_018439 BC036074	66724	+	AK301862|OSBPL1A|114876|oxysterol binding protein-like 1A##NM_001242508|OSBPL1A|114876|oxysterol binding protein-like 1A##AF274714|OSBPL1A|114876|oxysterol binding protein-like 1A##NM_018030|OSBPL1A|114876|oxysterol binding protein-like 1A##AK001079|OSBPL1A|114876|oxysterol binding protein-like 1A##BC136452|OSBPL1A|114876|oxysterol binding protein-like 1A##BC144117|OSBPL1A|114876|oxysterol binding protein-like 1A##BC041563|OSBPL1A|114876|oxysterol binding protein-like 1A##AK292895|OSBPL1A|114876|oxysterol binding protein-like 1A##AF323726|OSBPL1A|114876|oxysterol binding protein-like 1A##AF392450|OSBPL1A|114876|oxysterol binding protein-like 1A##AK096358|OSBPL1A|114876|oxysterol binding protein-like 1A##NM_080597|OSBPL1A|114876|oxysterol binding protein-like 1A##AK292533|IMPACT|55364|Impact homolog (mouse)##NM_018439|IMPACT|55364|Impact homolog (mouse)##BC036074|IMPACT|55364|Impact homolog (mouse)	0.989646	CTCF.p2:-20:0.990
chrX	1771265	1771387	reg1012082.p1	10.438	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	-37323	+	NM_004043 U11090	-56979	+	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	-60797	+	BC015030 NM_001171135	647253	-	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	647662	-	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	837986	+	AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015030|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1##BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule	0.995006	CTCF.p2:-11:0.995
chrX	83984860	83985000	reg1011757.p1	10.438	+	BC101720 BC101722 BC143522 BX538112 AK055240 AK290050 BX649166 NM_001177478 NM_001177479 NM_144657	-227488	-	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	-541958	-	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	-868759	+	AK130506 NM_198450 AY358193 BC107095 BC107096 CR749250	273937	+	NM_001012980	379043	-	TSC_hg19_v1_chrX_+_84498996 NM_021998	514067	+	BC101720|HDX|139324|highly divergent homeobox##BC101722|HDX|139324|highly divergent homeobox##BC143522|HDX|139324|highly divergent homeobox##BX538112|HDX|139324|highly divergent homeobox##AK055240|HDX|139324|highly divergent homeobox##AK290050|HDX|139324|highly divergent homeobox##BX649166|HDX|139324|highly divergent homeobox##NM_001177478|HDX|139324|highly divergent homeobox##NM_001177479|HDX|139324|highly divergent homeobox##NM_144657|HDX|139324|highly divergent homeobox##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##AK130506|APOOL|139322|apolipoprotein O-like##NM_198450|APOOL|139322|apolipoprotein O-like##AY358193|APOOL|139322|apolipoprotein O-like##BC107095|APOOL|139322|apolipoprotein O-like##BC107096|APOOL|139322|apolipoprotein O-like##CR749250|APOOL|139322|apolipoprotein O-like##NM_001012980|SATL1|340562|spermidine/spermine N1-acetyl transferase-like 1##NM_021998|ZNF711|7552|zinc finger protein 711	0.995423	CTCF.p2:-15:0.995
chr10	89195969	89196109	reg1012213.p1	10.437	+	BC092519 NM_001009610	-78589	+	TSC_hg19_v1_chr10_+_89102478 BC082979	-93441	+	TSC_hg19_v1_chr10_-_89102214 BC047063	-93781	-	NM_001178117 NM_004897 TSC_hg19_v1_chr10_+_89264649 AK304624 AK312937 AL050356 AF084943 AB209819 AF084944 AY358938 BC032504 AF046914 CU689404	68436	+	AK309176 NM_001178118	71550	+	TSC_hg19_v1_chr10_+_89419623 NM_001015880 NM_004670 BC009894 AK312556 AF091242 AF150754 AF074331 AF173365 DQ893625 DQ895430 AF313907	223506	+	BC092519|FAM22A|728118|family with sequence similarity 22, member A##NM_001009610|FAM22D|728130|family with sequence similarity 22, member D##BC082979|LOC677759|677759|uncharacterized LOC677759##BC047063|LOC728190|728190|uncharacterized LOC728190##NM_001178117|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_004897|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK304624|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK312937|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AL050356|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF084943|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AB209819|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF084944|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AY358938|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##BC032504|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF046914|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK309176|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178118|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001015880|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##NM_004670|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##BC009894|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK312556|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF091242|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF150754|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF074331|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF173365|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ893625|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ895430|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF313907|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2	0.990254	CTCF.p2:3:0.990
chr12	64219899	64220035	reg1010590.p1	10.437	+	BX647105 BX647419 TSC_hg19_v1_chr12_+_64173925	-46032	+	TSC_hg19_v1_chr12_+_64173629 AB015633 NM_014254 BC013152 BC002596 AK289382 CU680528 DQ891077 DQ894259	-46300	+	BC125215 BC125216 TSC_hg19_v1_chr12_-_64062283 AY358792 AL833344 AK310102 AK057511 BC068442 NM_173812	-157671	-	TSC_hg19_v1_chr12_+_64237847 BC065032	17759	+	TSC_hg19_v1_chr12_+_64238511 BC053903 NM_020762 BC029919	18579	+	BC071634 AK057111 BC036246 AK129933 NM_152440	396086	-	BX647105|TMEM5|10329|transmembrane protein 5##BX647419|TMEM5|10329|transmembrane protein 5##AB015633|TMEM5|10329|transmembrane protein 5##NM_014254|TMEM5|10329|transmembrane protein 5##BC013152|TMEM5|10329|transmembrane protein 5##BC002596|TMEM5|10329|transmembrane protein 5##AK289382|TMEM5|10329|transmembrane protein 5##DQ891077|TMEM5|10329|transmembrane protein 5##DQ894259|TMEM5|10329|transmembrane protein 5##BC125215|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC125216|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AY358792|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AL833344|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK310102|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK057511|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC068442|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_173812|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC071634|C12orf66|144577|chromosome 12 open reading frame 66##AK057111|C12orf66|144577|chromosome 12 open reading frame 66##BC036246|C12orf66|144577|chromosome 12 open reading frame 66##AK129933|C12orf66|144577|chromosome 12 open reading frame 66##NM_152440|C12orf66|144577|chromosome 12 open reading frame 66	0.0	
chr10	82841786	82841899	reg1007134.p1	10.436	+	AK123978 NM_001145719	-541268	+	AK123885 NM_207372	-544185	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-627738	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	793240	+	DQ857894 NM_001165973	795600	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3057415	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.750793	CTCF.p2:-13:0.751
chr11	48194534	48194647	reg1010707.p1	10.436	+	TSC_hg19_v1_chr11_+_48002270 AL359057 BC063417	-192231	+	D37781 TSC_hg19_v1_chr11_+_48002120	-192470	+	TSC_hg19_v1_chr11_+_48002110 NM_001098503 NM_002843 U10886	-192499	+	NM_001005470	43771	+	BC136935 BC136936 NM_001004727	72041	+	NM_001004726	90822	+	AL359057|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##BC063417|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##D37781|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_001098503|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_002843|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##U10886|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_001005470|OR4B1|119765|olfactory receptor, family 4, subfamily B, member 1##BC136935|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##BC136936|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##NM_001004727|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##NM_001004726|OR4X1|390113|olfactory receptor, family 4, subfamily X, member 1	0.998818	CTCF.p2:-9:0.999
chr2	135003064	135003207	reg1010786.p3	10.436	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-677097	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-823781	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-1463441	-	NM_002410 D17716 AF113921	8750	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	473421	-	AK125008 NM_138326 BC016018 BC107420 AB071418	593083	+	AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	0.875501	CTCF.p2:0:0.876
chr2	179626663	179626771	reg1010341.p2	10.436	+	TSC_hg19_v1_chr2_+_179387947 AK093733	-238757	+	TSC_hg19_v1_chr2_+_179345280 AF286162 BC044567 EU832321 EU832406	-281287	+	TSC_hg19_v1_chr2_+_179345234 AK074209	-281485	+	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	32984	-	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	45386	-	AL832777 NM_173648	288068	-	AK093733|LOC100506866|100506866|uncharacterized LOC100506866##AF286162|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##BC044567|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##EU832321|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##EU832406|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##AK074209|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##X98114|TTN|7273|titin##X98115|TTN|7273|titin##X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141	0.999002	CTCF.p2:-7:0.999
chr5	59678743	59678845	reg1009343.p2	10.435	+	NM_001104631	-489174	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	-614339	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	-614446	-	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	105110	-	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	105246	+	TSC_hg19_v1_chr5_-_59995928 AF490257	317122	-	NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AF490257|DEPDC1B|55789|DEP domain containing 1B	0.0	
chr6	74320259	74320438	reg1011428.p1	10.435	+	BC012891 BC010735 BC071619 BC082268 BC071741 BC008587 BC018150 BC018641 BC019669 BC029997 BC038339 BC072385 BC014224 BC018850 BC009875 BC035877 BC111051 X03558 AK315827 TSC_hg19_v1_chr6_-_74230757 AK223030 AK024888 AK222551 AK223046 AK297878 AK300922 BC021686 BC070131 AK026650 AK055058 AK058051 AK058082 AK098510 AK098518 AK098623 AK127384 AK222515 AK222523 AK222982 AK289374 AK289442 AK290691 AK304214 BC028674 BC066893 BC066894 BC070500 D28375 NM_001402	-89602	-	TSC_hg19_v1_chr6_-_74230163 AY043301	-90178	-	AK222519 BC020477 DQ867534 AF328730 AF397403 TSC_hg19_v1_chr6_-_74229235	-91179	-	DQ891462 EU176585 TSC_hg19_v1_chr6_-_74363649	43282	-	BC020961 AK075320 TSC_hg19_v1_chr6_-_74363692 AK315789 AK294068 NM_012434 AJ387747	43432	-	TSC_hg19_v1_chr6_+_74405513 NM_001159587 NM_001159588 NM_133493	85217	+	BC012891|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC010735|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC071619|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC082268|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC071741|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC008587|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018150|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018641|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC019669|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC029997|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC038339|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC072385|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC014224|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018850|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC009875|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC035877|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC111051|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##X03558|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK315827|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK223030|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK024888|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222551|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK223046|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK297878|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK300922|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC021686|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC070131|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK026650|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK055058|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK058051|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK058082|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098510|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098518|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098623|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK127384|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222515|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222523|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222982|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK289374|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK289442|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK290691|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK304214|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC028674|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC066893|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC066894|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##NM_001402|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AY043301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222519|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC020477|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##DQ867534|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AF328730|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AF397403|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##DQ891462|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##EU176585|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##BC020961|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AK075320|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AK315789|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AK294068|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##NM_012434|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AJ387747|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##NM_001159587|CD109|135228|CD109 molecule##NM_001159588|CD109|135228|CD109 molecule##NM_133493|CD109|135228|CD109 molecule	0.982145	CTCF.p2:19:0.982
chrX	117388712	117388831	reg1012238.p1	10.435	+	AK302713 NM_001168301	-137469	-	AL591986 TSC_hg19_v1_chrX_-_117250764 AK316509 NM_001168302 NM_001168303	-138046	-	AK296324 NM_001168299	-269443	-	TSC_hg19_v1_chrX_+_117480068 NM_001184965 NM_001184966 NM_019045 AK127556 BX537578 AL833605 BX538087 AK299711 BC028697 BX648150	91394	+	TSC_hg19_v1_chrX_+_117480490 AM393332 AM393787 EU831942 EU832037 AK304432	91691	+	TSC_hg19_v1_chrX_+_117526665 AL834210	137916	+	AK302713|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168301|KLHL13|90293|kelch-like 13 (Drosophila)##AL591986|KLHL13|90293|kelch-like 13 (Drosophila)##AK316509|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)##AK296324|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001184965|WDR44|54521|WD repeat domain 44##NM_001184966|WDR44|54521|WD repeat domain 44##NM_019045|WDR44|54521|WD repeat domain 44##AK127556|WDR44|54521|WD repeat domain 44##BX537578|WDR44|54521|WD repeat domain 44##AL833605|WDR44|54521|WD repeat domain 44##BX538087|WDR44|54521|WD repeat domain 44##AK299711|WDR44|54521|WD repeat domain 44##BC028697|WDR44|54521|WD repeat domain 44##BX648150|WDR44|54521|WD repeat domain 44##AM393332|WDR44|54521|WD repeat domain 44##AM393787|WDR44|54521|WD repeat domain 44##EU831942|WDR44|54521|WD repeat domain 44##EU832037|WDR44|54521|WD repeat domain 44##AK304432|WDR44|54521|WD repeat domain 44##AL834210|WDR44|54521|WD repeat domain 44	0.680621	CTCF.p2:-2:0.681
chr18	43793431	43793544	reg1011252.p1	10.434	+	TSC_hg19_v1_chr18_+_43754065 AK289738	-39405	+	TSC_hg19_v1_chr18_+_43754007 BC084579	-39472	+	TSC_hg19_v1_chr18_+_43754002 NM_001008239 NM_145055 AK292981	-39493	+	TSC_hg19_v1_chr18_+_43913942 AK055997	120445	+	AK091537 AK122819 AK127467 AX747044 NM_152470	120699	+	AK057232 BC047720 NM_001145473 NM_001173129	305553	-	AK289738|C18orf25|147339|chromosome 18 open reading frame 25##BC084579|C18orf25|147339|chromosome 18 open reading frame 25##NM_001008239|C18orf25|147339|chromosome 18 open reading frame 25##NM_145055|C18orf25|147339|chromosome 18 open reading frame 25##AK292981|C18orf25|147339|chromosome 18 open reading frame 25##AK055997|RNF165|494470|ring finger protein 165##AK091537|RNF165-IT1|147341|RNF165 intronic transcript 1 (non-protein coding)##AK122819|RNF165|494470|ring finger protein 165##AK127467|RNF165|494470|ring finger protein 165##NM_152470|RNF165|494470|ring finger protein 165##AK057232|LOXHD1|125336|lipoxygenase homology domains 1##BC047720|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145473|LOXHD1|125336|lipoxygenase homology domains 1##NM_001173129|LOXHD1|125336|lipoxygenase homology domains 1	0.016862	
chr19	51662141	51662258	reg1003316.p2	10.434	+	TSC_hg19_v1_chr19_+_51645559 NM_014385 NM_016543 AK314875 AF193441 BC028150 AJ007395 AF178981 AF170485 AJ130710 AJ130711 AJ130712 AJ130713	-16608	+	NM_001198558 NM_014441 AF227924 AK297043 BC035365 AB026265 AY358913 AK315272 AF247180 DQ892476 DQ895688	-33980	+	TSC_hg19_v1_chr19_-_51611637 AK291173 NM_145232	-50558	-	AK293934 TSC_hg19_v1_chr19_+_51728362 NM_001082618 NM_001177608 NM_001772 AK309558 M23197 AY162464	66144	+	BC028152 AK304810 TSC_hg19_v1_chr19_+_51728370 AB590304 DQ891726 DQ894903	66172	+	AK097554 NM_173635	98764	+	NM_014385|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##NM_016543|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AK314875|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF193441|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##BC028150|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ007395|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF178981|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF170485|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130710|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130711|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130712|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130713|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##NM_001198558|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##NM_014441|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AF227924|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK297043|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##BC035365|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AB026265|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AY358913|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK315272|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AF247180|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##DQ892476|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##DQ895688|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK291173|CTU1|90353|cytosolic thiouridylase subunit 1 homolog (S. pombe)##NM_145232|CTU1|90353|cytosolic thiouridylase subunit 1 homolog (S. pombe)##AK293934|CD33|945|CD33 molecule##NM_001082618|CD33|945|CD33 molecule##NM_001177608|CD33|945|CD33 molecule##NM_001772|CD33|945|CD33 molecule##AK309558|CD33|945|CD33 molecule##M23197|CD33|945|CD33 molecule##AY162464|CD33|945|CD33 molecule##BC028152|CD33|945|CD33 molecule##AK304810|CD33|945|CD33 molecule##DQ891726|CD33|945|CD33 molecule##DQ894903|CD33|945|CD33 molecule##AK097554|C19orf75|284369|chromosome 19 open reading frame 75##NM_173635|C19orf75|284369|chromosome 19 open reading frame 75	0.943866	CTCF.p2:13:0.944
chr13	52406691	52406812	reg1010451.p2	10.433	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	-28476	-	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-248016	+	TSC_hg19_v1_chr13_+_52158639 BC014004	-248110	+	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	29443	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	178799	-	TSC_hg19_v1_chr13_+_52586546 NM_001004127 BC142998 AK296747 AK092428 AX747540 BC108677 BC111022 AK025456 BC143059 BC150316	179784	+	BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##BC014004|WDFY2|115825|WD repeat and FYVE domain containing 2##AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	0.895744	CTCF.p2:8:0.896
chr3	48647107	48647219	reg1008485.p2	10.433	+	TSC_hg19_v1_chr3_-_48647091 NM_003365	-66	-	AB590667 TSC_hg19_v1_chr3_-_48647069 D26485 AK300694 AK302840 AK313090 BC009586 AK129903	-101	-	NM_000094 L02870 TSC_hg19_v1_chr3_-_48632733	-14469	-	NM_001008269 BC133034 BC133036	12074	-	AF279265 NM_001040454	24115	-	TSC_hg19_v1_chr3_-_48672883 DQ891721 EU176609 EU832127 AF288410 AF416721 AK297695 BC017697 AB033288	25684	-	NM_003365|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##D26485|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##AK300694|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##AK302840|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##AK313090|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##BC009586|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##AK129903|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##NM_000094|COL7A1|1294|collagen, type VII, alpha 1##L02870|COL7A1|1294|collagen, type VII, alpha 1##NM_001008269|TMEM89|440955|transmembrane protein 89##BC133034|TMEM89|440955|transmembrane protein 89##BC133036|TMEM89|440955|transmembrane protein 89##AF279265|SLC26A6|65010|solute carrier family 26, member 6##NM_001040454|SLC26A6|65010|solute carrier family 26, member 6##DQ891721|SLC26A6|65010|solute carrier family 26, member 6##EU176609|SLC26A6|65010|solute carrier family 26, member 6##EU832127|SLC26A6|65010|solute carrier family 26, member 6##AF288410|SLC26A6|65010|solute carrier family 26, member 6##AF416721|SLC26A6|65010|solute carrier family 26, member 6##AK297695|SLC26A6|65010|solute carrier family 26, member 6##BC017697|SLC26A6|65010|solute carrier family 26, member 6##AB033288|SLC26A6|65010|solute carrier family 26, member 6	0.460443	CTCF.p2:-5:0.460
chr12	14869896	14870026	reg1010477.p1	10.432	+	BC136544 BC136545 M73489 TSC_hg19_v1_chr12_-_14849534 S57551 AK310034 NM_004963	-20476	-	NM_024829 TSC_hg19_v1_chr12_-_14720806	-149157	-	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	-149352	-	AB527963 TSC_hg19_v1_chr12_-_14924064 AK311916 BC020884 NM_175054	54080	-	NM_177925 TSC_hg19_v1_chr12_+_14927302	57324	+	TSC_hg19_v1_chr12_+_14927338 AK001765 AK303301 BC003602 CU678528 AL133626	57449	+	BC136544|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##BC136545|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##M73489|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##S57551|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##AK310034|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##NM_004963|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##NM_024829|PLBD1|79887|phospholipase B domain containing 1##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1##BC020884|HIST4H4|121504|histone cluster 4, H4##NM_175054|HIST4H4|121504|histone cluster 4, H4##NM_177925|H2AFJ|55766|H2A histone family, member J##AK001765|H2AFJ|55766|H2A histone family, member J##AK303301|H2AFJ|55766|H2A histone family, member J##BC003602|H2AFJ|55766|H2A histone family, member J##AL133626|H2AFJ|55766|H2A histone family, member J	0.977817	CTCF.p2:8:0.978
chr5	98241729	98241870	reg1009596.p1	10.432	+	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-136758	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-1722812	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-1722857	-	BC054860 BC117134 NM_001270 AF006513	20429	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	1629274	+	AF529367 TSC_hg19_v1_chr5_+_99871306	1629471	+	BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A	0.9917	CTCF.p2:-36:0.992
chr8	7255447	7255555	reg1010399.p1	10.432	+	NM_001164457	-35012	-	TSC_hg19_v1_chr8_-_7212868 AK307331 AK302471	-42625	-	NM_001164453	-102966	+	NM_001205266	18852	-	AB590071 AF217245 AF516673 AB037972 AJ237673 NM_018661 AF295370	32167	-	AF301470 NM_001081551	32368	-	NM_001164457|ZNF705G|100131980|zinc finger protein 705G##AK302471|FAM66B|100128890|family with sequence similarity 66, member B##NM_001164453|FAM90A20|728430|family with sequence similarity 90, member A20##NM_001205266|DEFB4B|100289462|defensin, beta 4B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AF295370|DEFB103B|55894|defensin, beta 103B##AF301470|DEFB103B|55894|defensin, beta 103B##NM_001081551|DEFB103A|414325|defensin, beta 103A	0.996026	CTCF.p2:4:0.996
chr4	48277385	48277523	reg1011476.p1	10.431	+	BC101711 BC101713 BC143487 NM_003215 TSC_hg19_v1_chr4_-_48271858	-5619	-	BC017829 L27071 NM_003328	-141196	-	TSC_hg19_v1_chr4_+_48018788 BC067881 CR749484 NM_207330 AK095299	-258651	+	BC040993 TSC_hg19_v1_chr4_+_48343485 AK291006	65957	+	TSC_hg19_v1_chr4_+_48343571 BC006139 BC007701 BC012067 NM_020846 AB040891	66159	+	TSC_hg19_v1_chr4_+_48485353 AK126542 NM_152679 BC019066 BC012048 DQ892628 EU176704 AY704414	207973	+	BC101711|TEC|7006|tec protein tyrosine kinase##BC101713|TEC|7006|tec protein tyrosine kinase##BC143487|TEC|7006|tec protein tyrosine kinase##NM_003215|TEC|7006|tec protein tyrosine kinase##BC017829|TXK|7294|TXK tyrosine kinase##L27071|TXK|7294|TXK tyrosine kinase##NM_003328|TXK|7294|TXK tyrosine kinase##BC067881|NIPAL1|152519|NIPA-like domain containing 1##CR749484|NIPAL1|152519|NIPA-like domain containing 1##NM_207330|NIPAL1|152519|NIPA-like domain containing 1##AK095299|NIPAL1|152519|NIPA-like domain containing 1##BC040993|SLAIN2|57606|SLAIN motif family, member 2##AK291006|SLAIN2|57606|SLAIN motif family, member 2##BC006139|SLAIN2|57606|SLAIN motif family, member 2##BC007701|SLAIN2|57606|SLAIN motif family, member 2##BC012067|SLAIN2|57606|SLAIN motif family, member 2##NM_020846|SLAIN2|57606|SLAIN motif family, member 2##AB040891|SLAIN2|57606|SLAIN motif family, member 2##AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	0.146	
chr11	130764440	130764560	reg1009917.p2	10.430	+	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-445838	+	TSC_hg19_v1_chr11_-_130298505 NM_007037	-465980	-	BC113874 TSC_hg19_v1_chr11_-_130298419 BC089435	-466138	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	21845	-	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	21888	-	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	475969	+	AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_007037|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC113874|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC089435|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin	0.980019	CTCF.p2:-1:0.980
chr18	37739491	37739626	reg1010231.p2	10.430	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-359290	-	TSC_hg19_v1_chr18_-_36915657 D28405	-823902	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	-2593559	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	1795641	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	1795675	+	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	2956011	-	AK090603|LOC647946|647946|uncharacterized LOC647946##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2	0.970006	CTCF.p2:18:0.970
chr2	236044746	236044848	reg1009500.p1	10.430	+	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	-184139	+	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	-639078	-	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-1085410	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	358006	+	TSC_hg19_v1_chr2_+_236402950 BC140856	358180	+	TSC_hg19_v1_chr2_+_236403297 AB384114 AF413078	358513	+	BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AF413078|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.992064	CTCF.p2:2:0.992
chr8	104123840	104123942	reg1010610.p2	10.430	+	TSC_hg19_v1_chr8_+_104033310 AK308632 BC010960 X69151 AK000064	-90571	+	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	-90624	+	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	-247496	-	TSC_hg19_v1_chr8_+_104152984 NM_001024372 NM_024812 BC035038 AK022077 BC011517 AK093819 AF371319 AF371323 DQ893318 DQ896633	29109	+	NM_001164615 BX640609 AK313789	186783	+	NM_001164616 NM_003506 TSC_hg19_v1_chr8_+_104311103 AK299341 AK296824 BC060836 BC036106 AB012911 AK304092 AK316544	187200	+	AK308632|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC010960|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##X69151|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK000064|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##NM_001024372|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_024812|BAALC|79870|brain and acute leukemia, cytoplasmic##BC035038|BAALC|79870|brain and acute leukemia, cytoplasmic##AK022077|BAALC|79870|brain and acute leukemia, cytoplasmic##BC011517|BAALC|79870|brain and acute leukemia, cytoplasmic##AK093819|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371319|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371323|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ893318|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ896633|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_001164615|FZD6|8323|frizzled family receptor 6##BX640609|FZD6|8323|frizzled family receptor 6##AK313789|FZD6|8323|frizzled family receptor 6##NM_001164616|FZD6|8323|frizzled family receptor 6##NM_003506|FZD6|8323|frizzled family receptor 6##AK299341|FZD6|8323|frizzled family receptor 6##AK296824|FZD6|8323|frizzled family receptor 6##BC060836|FZD6|8323|frizzled family receptor 6##BC036106|FZD6|8323|frizzled family receptor 6##AB012911|FZD6|8323|frizzled family receptor 6##AK304092|FZD6|8323|frizzled family receptor 6##AK316544|FZD6|8323|frizzled family receptor 6	0.999952	CTCF.p2:-4:1.000
chr11	11287673	11287810	reg1010201.p2	10.429	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-407955	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-408223	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-456944	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	355837	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	575275	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	575750	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.995142	CTCF.p2:7:0.995
chr1	153482339	153482469	reg1008477.p1	10.429	+	BC034687 M86757 NM_002963	-49284	-	NM_001045479	-69902	-	AY189118 NM_176823	-93405	+	TSC_hg19_v1_chr1_-_153508468 AK312088 D28464	26061	-	TSC_hg19_v1_chr1_-_153508522 BC001431	26128	-	TSC_hg19_v1_chr1_-_153508622 BC009017 NM_014624	26252	-	BC034687|S100A7|6278|S100 calcium binding protein A7##M86757|S100A7|6278|S100 calcium binding protein A7##NM_002963|S100A7|6278|S100 calcium binding protein A7##NM_001045479|S100A7L2|645922|S100 calcium binding protein A7-like 2##AY189118|S100A7A|338324|S100 calcium binding protein A7A##NM_176823|S100A7A|338324|S100 calcium binding protein A7A##AK312088|S100A6|6277|S100 calcium binding protein A6##D28464|S100A6|6277|S100 calcium binding protein A6##BC001431|S100A6|6277|S100 calcium binding protein A6##BC009017|S100A6|6277|S100 calcium binding protein A6##NM_014624|S100A6|6277|S100 calcium binding protein A6	0.918482	CTCF.p2:0:0.918
chr12	56520052	56520194	reg1012423.p1	10.429	+	TSC_hg19_v1_chr12_+_56512049 AK027357 NM_032786 BC018708	-8114	+	NM_001035267 NM_021104 Z12962 BC102007 BC102008 BC102009 D28462 BC014383 BC070254 BC105286 BC015984 BC070252 BC070253 BC070255 BC105279 BC105296 BC105794 BC105795 BC105799 TSC_hg19_v1_chr12_+_56510418 BC017820 BC062462 BC064907 BC142666 BC142726 BC082759 BC066328 BC032611 BC070483	-9655	+	TSC_hg19_v1_chr12_+_56498422 BC011718 BC032111 BC072007 U59435 BC069786 AB464072 CU675707 DQ893446 DQ896751	-21656	+	TSC_hg19_v1_chr12_+_56522018 NM_001184796 NM_015292 AK022790	1874	+	TSC_hg19_v1_chr12_+_56522044 AK128730	1921	+	TSC_hg19_v1_chr12_+_56522050 AK225035 AK290337 BC004998 BC013880	1934	+	AK027357|ZC3H10|84872|zinc finger CCCH-type containing 10##NM_032786|ZC3H10|84872|zinc finger CCCH-type containing 10##BC018708|ZC3H10|84872|zinc finger CCCH-type containing 10##NM_001035267|RPL41|6171|ribosomal protein L41##NM_021104|RPL41|6171|ribosomal protein L41##Z12962|RPL41|6171|ribosomal protein L41##BC102007|RPL41|6171|ribosomal protein L41##BC102008|RPL41|6171|ribosomal protein L41##BC102009|RPL41|6171|ribosomal protein L41##D28462|RPL41|6171|ribosomal protein L41##BC014383|RPL41|6171|ribosomal protein L41##BC070254|RPL41|6171|ribosomal protein L41##BC105286|RPL41|6171|ribosomal protein L41##BC015984|RPL41|6171|ribosomal protein L41##BC070252|RPL41|6171|ribosomal protein L41##BC070253|RPL41|6171|ribosomal protein L41##BC070255|RPL41|6171|ribosomal protein L41##BC105279|RPL41|6171|ribosomal protein L41##BC105296|RPL41|6171|ribosomal protein L41##BC105794|RPL41|6171|ribosomal protein L41##BC105795|RPL41|6171|ribosomal protein L41##BC105799|RPL41|6171|ribosomal protein L41##BC017820|RPL41|6171|ribosomal protein L41##BC062462|RPL41|6171|ribosomal protein L41##BC064907|RPL41|6171|ribosomal protein L41##BC142666|RPL41|6171|ribosomal protein L41##BC142726|RPL41|6171|ribosomal protein L41##BC082759|RPL41|6171|ribosomal protein L41##BC066328|RPL41|6171|ribosomal protein L41##BC032611|RPL41|6171|ribosomal protein L41##BC070483|RPL41|6171|ribosomal protein L41##BC032111|PA2G4|5036|proliferation-associated 2G4, 38kDa##BC072007|PA2G4|5036|proliferation-associated 2G4, 38kDa##U59435|PA2G4|5036|proliferation-associated 2G4, 38kDa##BC069786|PA2G4|5036|proliferation-associated 2G4, 38kDa##DQ893446|PA2G4|5036|proliferation-associated 2G4, 38kDa##DQ896751|PA2G4|5036|proliferation-associated 2G4, 38kDa##NM_001184796|ESYT1|23344|extended synaptotagmin-like protein 1##NM_015292|ESYT1|23344|extended synaptotagmin-like protein 1##AK022790|ESYT1|23344|extended synaptotagmin-like protein 1##AK128730|ESYT1|23344|extended synaptotagmin-like protein 1##AK225035|ESYT1|23344|extended synaptotagmin-like protein 1##AK290337|ESYT1|23344|extended synaptotagmin-like protein 1##BC004998|ESYT1|23344|extended synaptotagmin-like protein 1##BC013880|ESYT1|23344|extended synaptotagmin-like protein 1	0.994781	CTCF.p2:8:0.995
chr15	83679719	83679816	reg1010199.p1	10.429	+	NM_031452 TSC_hg19_v1_chr15_+_83654965 BC112329 AK027095 BC003627 BC027181	-24789	+	TSC_hg19_v1_chr15_-_83654854 AK097109	-24908	-	AF081530 TSC_hg19_v1_chr15_-_83621443 AK292772 BC012109 NM_004839 NM_199330	-58345	-	TSC_hg19_v1_chr15_-_83680364 AK311484 AK125586 BC019820 AK312160	582	-	TSC_hg19_v1_chr15_-_83680376 NM_001160113 NM_001160114 NM_001160115 NM_001160116 NM_144597	613	-	TSC_hg19_v1_chr15_-_83735995 AB462966 AF529369 AM393763 AY364253 DQ891458 DQ894635 CU688394 BC017464 AK000731 AK225355 AK225362 AF355402 AF257241 AL136853	56177	-	NM_031452|FAM103A1|83640|family with sequence similarity 103, member A1##BC112329|FAM103A1|83640|family with sequence similarity 103, member A1##AK027095|FAM103A1|83640|family with sequence similarity 103, member A1##BC003627|FAM103A1|83640|family with sequence similarity 103, member A1##BC027181|FAM103A1|83640|family with sequence similarity 103, member A1##AK097109|LOC100131860|100131860|uncharacterized LOC100131860##AF081530|HOMER2|9455|homer homolog 2 (Drosophila)##AK292772|HOMER2|9455|homer homolog 2 (Drosophila)##BC012109|HOMER2|9455|homer homolog 2 (Drosophila)##NM_004839|HOMER2|9455|homer homolog 2 (Drosophila)##NM_199330|HOMER2|9455|homer homolog 2 (Drosophila)##AK311484|C15orf40|123207|chromosome 15 open reading frame 40##AK125586|C15orf40|123207|chromosome 15 open reading frame 40##BC019820|C15orf40|123207|chromosome 15 open reading frame 40##AK312160|C15orf40|123207|chromosome 15 open reading frame 40##NM_001160113|C15orf40|123207|chromosome 15 open reading frame 40##NM_001160114|C15orf40|123207|chromosome 15 open reading frame 40##NM_001160115|C15orf40|123207|chromosome 15 open reading frame 40##NM_001160116|C15orf40|123207|chromosome 15 open reading frame 40##NM_144597|C15orf40|123207|chromosome 15 open reading frame 40##AF529369|BTBD1|53339|BTB (POZ) domain containing 1##AM393763|BTBD1|53339|BTB (POZ) domain containing 1##AY364253|BTBD1|53339|BTB (POZ) domain containing 1##DQ891458|BTBD1|53339|BTB (POZ) domain containing 1##DQ894635|BTBD1|53339|BTB (POZ) domain containing 1##BC017464|BTBD1|53339|BTB (POZ) domain containing 1##AK000731|BTBD1|53339|BTB (POZ) domain containing 1##AK225355|BTBD1|53339|BTB (POZ) domain containing 1##AK225362|BTBD1|53339|BTB (POZ) domain containing 1##AF355402|BTBD1|53339|BTB (POZ) domain containing 1##AF257241|BTBD1|53339|BTB (POZ) domain containing 1##AL136853|BTBD1|53339|BTB (POZ) domain containing 1	0.979853	CTCF.p2:4:0.980
chr8	118486673	118486809	reg1009894.p1	10.429	+	NM_001172814 NM_173851	-339405	+	AK298294 NM_001172813 NM_001172815 AL713790	-523538	+	EF560713 NM_001172811	-524230	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	46217	+	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	46301	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	637220	-	NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##EF560713|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172811|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_080651|MED30|90390|mediator complex subunit 30##BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1	0.085494	
chr1	163498659	163498784	reg1010646.p1	10.428	+	NM_031423 NM_145697 TSC_hg19_v1_chr1_+_163291746 AK093348 AX748068 AF326731 BC008489 AB050577	-206945	+	TSC_hg19_v1_chr1_-_163291574 BC032239	-207160	-	TSC_hg19_v1_chr1_-_163172866 NM_003617	-325809	-	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	1029870	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	1030265	+	TSC_hg19_v1_chr1_+_164818083 AK022520	1319402	+	NM_031423|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_145697|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK093348|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AF326731|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC008489|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AB050577|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_003617|RGS5|8490|regulator of G-protein signaling 5##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1	0.994812	CTCF.p2:-10:0.450	CTCF.p2:-11:0.545
chr6	139690764	139690894	reg1010720.p1	10.428	+	TSC_hg19_v1_chr6_-_139613136 BX647633 AL834248 AL831988 AK314725 BX647477 BC115383 BC115384 AB085905 NM_153235	-77669	-	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	-234573	+	TSC_hg19_v1_chr6_+_139349935 AK309402 AF116682 BC014953	-340911	+	NM_001168389 NM_001168388	4594	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	4932	-	NM_006079 TSC_hg19_v1_chr6_-_139695784	4955	-	BX647633|TXLNB|167838|taxilin beta##AL834248|TXLNB|167838|taxilin beta##AL831988|TXLNB|167838|taxilin beta##AK314725|TXLNB|167838|taxilin beta##BX647477|TXLNB|167838|taxilin beta##BC115383|TXLNB|167838|taxilin beta##BC115384|TXLNB|167838|taxilin beta##AB085905|TXLNB|167838|taxilin beta##NM_153235|TXLNB|167838|taxilin beta##BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)##AF116682|C6orf115|58527|chromosome 6 open reading frame 115##BC014953|C6orf115|58527|chromosome 6 open reading frame 115##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	0.877018	CTCF.p2:-23:0.877
chr12	131939403	131939499	reg1007174.p2	10.427	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-500998	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-582740	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-582826	+	TSC_hg19_v1_chr12_+_132195623 BC142980	256162	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	256205	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	373515	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.0	
chr12	40405068	40405192	reg1010882.p1	10.427	+	BC038754 NM_001031748 BC048120 AK097445	-385135	+	AK314254 NM_005164	-391288	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	-568131	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	94559	-	TSC_hg19_v1_chr12_-_40499870 BC047507	94742	-	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	213729	+	BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2	1.57531	CTCF.p2:15:0.990	CTCF.p2:-53:0.585
chr13	100552700	100552856	reg1010969.p1	10.427	+	TSC_hg19_v1_chr13_+_100258943 NM_206808 AK300510 BC034360 AK095506 AF428253 CU689862	-293858	+	BC041830 TSC_hg19_v1_chr13_+_100229390	-323401	+	TSC_hg19_v1_chr13_+_100153777 BC130293	-398996	+	AF378304 NM_033132	71391	-	TSC_hg19_v1_chr13_+_100633453 AK298232	80677	+	TSC_hg19_v1_chr13_+_100634037 NM_007129	81242	+	NM_206808|CLYBL|171425|citrate lyase beta like##AK300510|CLYBL|171425|citrate lyase beta like##BC034360|CLYBL|171425|citrate lyase beta like##AK095506|CLYBL|171425|citrate lyase beta like##AF428253|CLYBL|171425|citrate lyase beta like##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2##AF378304|ZIC5|85416|Zic family member 5##NM_033132|ZIC5|85416|Zic family member 5##NM_007129|ZIC2|7546|Zic family member 2	0.311021	CTCF.p2:5:0.311
chr15	81398946	81399069	reg1012097.p1	10.427	+	TSC_hg19_v1_chr15_+_81293344 NM_022566	-105663	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	-116807	-	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	-327286	+	AK302120 BC062471 NM_173528 AK307565	27620	+	AK124725 NM_001172128 AK124565 AK131530	90211	+	NM_172217 AY324389	118682	+	NM_022566|MESDC1|59274|mesoderm development candidate 1##D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26##AK124725|IL16|3603|interleukin 16##NM_001172128|IL16|3603|interleukin 16##AK124565|IL16|3603|interleukin 16##AK131530|IL16|3603|interleukin 16##NM_172217|IL16|3603|interleukin 16##AY324389|IL16|3603|interleukin 16	0.897786	CTCF.p2:0:0.898
chr12	76740927	76741074	reg1012799.p1	10.426	+	NM_004537 NM_139207	-262263	-	TSC_hg19_v1_chr12_-_76478466 BC002387 AL162068 AK122670 AK298936 D28430 AK297500 AK304787	-262512	-	TSC_hg19_v1_chr12_-_76478393 AK295147 M86667	-262622	-	TSC_hg19_v1_chr12_-_76742196 AK304178 BC026355 NM_024685	1194	-	AB040884 TSC_hg19_v1_chr12_-_76953317 AK289997 CR749542	212291	-	BC111728 TSC_hg19_v1_chr12_-_76953484	212483	-	NM_004537|NAP1L1|4673|nucleosome assembly protein 1-like 1##NM_139207|NAP1L1|4673|nucleosome assembly protein 1-like 1##BC002387|NAP1L1|4673|nucleosome assembly protein 1-like 1##AL162068|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK122670|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK298936|NAP1L1|4673|nucleosome assembly protein 1-like 1##D28430|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK297500|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK304787|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK295147|NAP1L1|4673|nucleosome assembly protein 1-like 1##M86667|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK304178|BBS10|79738|Bardet-Biedl syndrome 10##BC026355|BBS10|79738|Bardet-Biedl syndrome 10##NM_024685|BBS10|79738|Bardet-Biedl syndrome 10##AB040884|OSBPL8|114882|oxysterol binding protein-like 8##AK289997|OSBPL8|114882|oxysterol binding protein-like 8##CR749542|OSBPL8|114882|oxysterol binding protein-like 8##BC111728|OSBPL8|114882|oxysterol binding protein-like 8	0.896187	CTCF.p2:11:0.896
chr12	52672864	52672995	reg1011018.p2	10.425	+	TSC_hg19_v1_chr12_+_52627029 AK025881 AK128848 AF509887 AJ238246 X03212 AK128505 AK225498 BC002700 DQ892996 DQ896244 AB590146 CU678130	-45886	+	NM_005556 TSC_hg19_v1_chr12_+_52626966	-45967	+	BC117348 BC126393 BC038743 NM_001242696	-68366	-	AB527612 HQ258431 BC117465 BC117467 NM_002281	12344	-	NM_002284 BC069585 CU686916 X99142	22749	+	BC126935 BC128063 BC069546 X99141 AK314904 NM_002282	42231	-	AK025881|KRT7|3855|keratin 7##AK128848|KRT7|3855|keratin 7##AF509887|KRT7|3855|keratin 7##AJ238246|KRT7|3855|keratin 7##X03212|KRT7|3855|keratin 7##AK128505|KRT7|3855|keratin 7##AK225498|KRT7|3855|keratin 7##BC002700|KRT7|3855|keratin 7##DQ892996|KRT7|3855|keratin 7##DQ896244|KRT7|3855|keratin 7##NM_005556|KRT7|3855|keratin 7##BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##HQ258431|KRT81|3887|keratin 81##BC117465|KRT81|3887|keratin 81##BC117467|KRT81|3887|keratin 81##NM_002281|KRT81|3887|keratin 81##NM_002284|KRT86|3892|keratin 86##BC069585|KRT86|3892|keratin 86##X99142|KRT86|3892|keratin 86##BC126935|KRT83|3889|keratin 83##BC128063|KRT83|3889|keratin 83##BC069546|KRT83|3889|keratin 83##X99141|KRT83|3889|keratin 83##AK314904|KRT83|3889|keratin 83##NM_002282|KRT83|3889|keratin 83	0.0	
chr2	181969393	181969526	reg1010220.p1	10.425	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-123632	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-123816	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-124089	+	NM_000885	352159	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	352591	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	352863	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.993655	CTCF.p2:-26:0.994
chr10	122096572	122096697	reg1011750.p1	10.424	+	NM_007190 TSC_hg19_v1_chr10_+_121652241 AB019435 AK021846 AK314592 AK001135 AK001135 AK301517 BC063800 BC063800 BC002540 AF116723 BX649119 BX649119 AB384691 CU687818 BT006755	-444445	+	AK023143 TSC_hg19_v1_chr10_-_121632359 BC004183 BC007219 NM_024834	-464294	-	TSC_hg19_v1_chr10_-_121602031 BC000935	-494571	-	NM_001030059 TSC_hg19_v1_chr10_+_122216486 BC101267 BC101268 BC101269 BC122535 BC132787 AK296273 HQ258170 AK310178	120005	+	NM_018117 TSC_hg19_v1_chr10_+_122610771	514094	+	TSC_hg19_v1_chr10_+_122610873 BC040469 AB037772 AK299524 AF320223 AK301761 BC071564 AK315145 AB385454	514261	+	NM_007190|SEC23IP|11196|SEC23 interacting protein##AB019435|SEC23IP|11196|SEC23 interacting protein##AK021846|SEC23IP|11196|SEC23 interacting protein##AK314592|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK301517|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC002540|SEC23IP|11196|SEC23 interacting protein##AF116723|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BT006755|SEC23IP|11196|SEC23 interacting protein##AK023143|MCMBP|79892|minichromosome maintenance complex binding protein##BC004183|MCMBP|79892|minichromosome maintenance complex binding protein##BC007219|MCMBP|79892|minichromosome maintenance complex binding protein##NM_024834|MCMBP|79892|minichromosome maintenance complex binding protein##BC000935|MCMBP|79892|minichromosome maintenance complex binding protein##NM_001030059|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101267|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101268|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101269|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC122535|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC132787|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##HQ258170|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AK310178|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##NM_018117|WDR11|55717|WD repeat domain 11##BC040469|WDR11|55717|WD repeat domain 11##AB037772|WDR11|55717|WD repeat domain 11##AK299524|WDR11|55717|WD repeat domain 11##AF320223|WDR11|55717|WD repeat domain 11##AK301761|WDR11|55717|WD repeat domain 11##BC071564|WDR11|55717|WD repeat domain 11##AK315145|WDR11|55717|WD repeat domain 11	0.933675	CTCF.p2:-3:0.934
chr14	37411537	37411657	reg1010998.p1	10.424	+	AK313627 TSC_hg19_v1_chr14_+_37131133 AB248958	-280472	+	TSC_hg19_v1_chr14_+_37131069 BC001159	-280513	+	NM_006194	-284825	+	AJ278148 NM_001171170 NM_030631	230267	-	TSC_hg19_v1_chr14_+_37667116 NM_001195296 NM_001195297 NM_138731	255521	+	TSC_hg19_v1_chr14_+_37667148 BC035870 BX537396 AK291850 BC036523 BC036124 BX647795 AY059470	255623	+	AK313627|PAX9|5083|paired box 9##AB248958|PAX9|5083|paired box 9##BC001159|PAX9|5083|paired box 9##NM_006194|PAX9|5083|paired box 9##AJ278148|SLC25A21|89874|solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21##NM_001171170|SLC25A21|89874|solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21##NM_030631|SLC25A21|89874|solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21##NM_001195296|MIPOL1|145282|mirror-image polydactyly 1##NM_001195297|MIPOL1|145282|mirror-image polydactyly 1##NM_138731|MIPOL1|145282|mirror-image polydactyly 1##BC035870|MIPOL1|145282|mirror-image polydactyly 1##BX537396|MIPOL1|145282|mirror-image polydactyly 1##AK291850|MIPOL1|145282|mirror-image polydactyly 1##BC036523|MIPOL1|145282|mirror-image polydactyly 1##BC036124|MIPOL1|145282|mirror-image polydactyly 1##BX647795|MIPOL1|145282|mirror-image polydactyly 1##AY059470|MIPOL1|145282|mirror-image polydactyly 1	0.947311	CTCF.p2:18:0.947
chr17	76795158	76795296	reg1010607.p1	10.424	+	AB590939 EU832306 EU832390 BC050452 BC038385 TSC_hg19_v1_chr17_-_76778380 AK296914 AK307917 M85169 NM_004762 NM_017456	-16874	-	TSC_hg19_v1_chr17_-_76732958 AK311535	-62229	-	TSC_hg19_v1_chr17_-_76719676 AK293894	-75476	-	BC071582 TSC_hg19_v1_chr17_-_76836610	41423	-	TSC_hg19_v1_chr17_-_76836843 AK225426	41556	-	TSC_hg19_v1_chr17_-_76836895 AB040886 BC027992 AK022913 AK225155 BC016487 BC038983 NM_025090 AK001671	41693	-	EU832306|CYTH1|9267|cytohesin 1##EU832390|CYTH1|9267|cytohesin 1##BC050452|CYTH1|9267|cytohesin 1##BC038385|CYTH1|9267|cytohesin 1##AK296914|CYTH1|9267|cytohesin 1##AK307917|CYTH1|9267|cytohesin 1##M85169|CYTH1|9267|cytohesin 1##NM_004762|CYTH1|9267|cytohesin 1##NM_017456|CYTH1|9267|cytohesin 1##AK293894|CYTH1|9267|cytohesin 1##BC071582|USP36|57602|ubiquitin specific peptidase 36##AK225426|USP36|57602|ubiquitin specific peptidase 36##AB040886|USP36|57602|ubiquitin specific peptidase 36##BC027992|USP36|57602|ubiquitin specific peptidase 36##AK022913|USP36|57602|ubiquitin specific peptidase 36##AK225155|USP36|57602|ubiquitin specific peptidase 36##BC016487|USP36|57602|ubiquitin specific peptidase 36##BC038983|USP36|57602|ubiquitin specific peptidase 36##NM_025090|USP36|57602|ubiquitin specific peptidase 36##AK001671|USP36|57602|ubiquitin specific peptidase 36	0.998636	CTCF.p2:0:0.999
chr18	57450440	57450572	reg1012222.p1	10.424	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-85856	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	-85915	-	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	-424020	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	116723	+	AK314130 NM_005912	589494	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1707268	+	NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2	0.908898	CTCF.p2:-13:0.909
chr6	126074939	126075064	reg1011029.p1	10.424	+	TSC_hg19_v1_chr6_+_126070895 AB463717 AF311884 BT020067 BT020068 CU675765	-4093	+	AK289943 AF232238 AB044755 BC007707 TSC_hg19_v1_chr6_+_126070853 AF237949 AJ249545	-4159	+	TSC_hg19_v1_chr6_+_126070775 AF173901	-4235	+	TSC_hg19_v1_chr6_+_126102306 AF493978 NM_001199619 NM_001199620 AK307395 BC137094 BC137095	27333	+	TSC_hg19_v1_chr6_+_126111841 NM_001122842 NM_001199621 NM_181782	36852	+	TSC_hg19_v1_chr6_+_126112105 BC036461 AK127512 AB074157 AK294558 BX537385 AL832621 AL832628 AB074156	37107	+	AF311884|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##BT020067|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##BT020068|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AK289943|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF232238|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AB044755|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##BC007707|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF237949|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AJ249545|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF173901|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF493978|NCOA7|135112|nuclear receptor coactivator 7##NM_001199619|NCOA7|135112|nuclear receptor coactivator 7##NM_001199620|NCOA7|135112|nuclear receptor coactivator 7##AK307395|NCOA7|135112|nuclear receptor coactivator 7##BC137094|NCOA7|135112|nuclear receptor coactivator 7##BC137095|NCOA7|135112|nuclear receptor coactivator 7##NM_001122842|NCOA7|135112|nuclear receptor coactivator 7##NM_001199621|NCOA7|135112|nuclear receptor coactivator 7##NM_181782|NCOA7|135112|nuclear receptor coactivator 7##BC036461|NCOA7|135112|nuclear receptor coactivator 7##AK127512|NCOA7|135112|nuclear receptor coactivator 7##AB074157|NCOA7|135112|nuclear receptor coactivator 7##AK294558|NCOA7|135112|nuclear receptor coactivator 7##BX537385|NCOA7|135112|nuclear receptor coactivator 7##AL832621|NCOA7|135112|nuclear receptor coactivator 7##AL832628|NCOA7|135112|nuclear receptor coactivator 7##AB074156|NCOA7|135112|nuclear receptor coactivator 7	0.985227	CTCF.p2:-8:0.985
chr9	100174103	100174225	reg1010552.p1	10.424	+	NM_020893 CR749320	-104226	+	AK312806 NM_001201575	-372240	-	AF070448 BC023504 Y14734 AB001928 AK310645 AK310740 BC110512 AY358641 NM_001333	-372686	-	TSC_hg19_v1_chr9_+_100174364 NM_014290 BC028694	109	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	215	+	NM_001166116 AK314533	89298	+	NM_020893|C9orf174|100499483|chromosome 9 open reading frame 174##CR749320|C9orf174|100499483|chromosome 9 open reading frame 174##AK312806|CTSL2|1515|cathepsin L2##NM_001201575|CTSL2|1515|cathepsin L2##AF070448|CTSL2|1515|cathepsin L2##BC023504|CTSL2|1515|cathepsin L2##Y14734|CTSL2|1515|cathepsin L2##AB001928|CTSL2|1515|cathepsin L2##AK310645|CTSL2|1515|cathepsin L2##AK310740|CTSL2|1515|cathepsin L2##BC110512|CTSL2|1515|cathepsin L2##AY358641|CTSL2|1515|cathepsin L2##NM_001333|CTSL2|1515|cathepsin L2##NM_014290|TDRD7|23424|tudor domain containing 7##BC028694|TDRD7|23424|tudor domain containing 7##AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7##NM_001166116|TMOD1|7111|tropomodulin 1##AK314533|TMOD1|7111|tropomodulin 1	1.724809	CTCF.p2:-8:0.983	CTCF.p2:65:0.661
chr1	211751188	211751313	reg1009915.p1	10.422	+	AY191519 NM_001164688 NM_183059	-84992	-	TSC_hg19_v1_chr1_+_211556168 BC005997	-195082	+	TSC_hg19_v1_chr1_+_211556144 AK130858	-195103	+	AF364518 TSC_hg19_v1_chr1_-_211751805	512	-	AB451467 TSC_hg19_v1_chr1_-_211752048	750	-	TSC_hg19_v1_chr1_-_211752056 BC121015 BC121016 NM_021194	838	-	AY191519|RD3|343035|retinal degeneration 3##NM_001164688|RD3|343035|retinal degeneration 3##NM_183059|RD3|343035|retinal degeneration 3##BC005997|LINC00467|84791|long intergenic non-protein coding RNA 467##AK130858|LINC00467|84791|long intergenic non-protein coding RNA 467##AF364518|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121015|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121016|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##NM_021194|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1	0.137419	
chr9	41857643	41857781	reg1012946.p1	10.422	+	BC040528 NM_001113541 NM_015667	-357034	+	BC040528 NM_001113541 NM_015667 NM_001242613	-530333	-	AK057375 AK292150 NM_033160	-1065626	-	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	97202	-	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	510646	+	NM_001099279 NM_199244	859521	+	BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##AK057375|ZNF658|26149|zinc finger protein 658##AK292150|ZNF658|26149|zinc finger protein 658##NM_033160|ZNF658|26149|zinc finger protein 658##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.415484	CTCF.p2:-3:0.415
chr22	38808916	38809055	reg1012994.p1	10.421	+	TSC_hg19_v1_chr22_-_38794883 AK307225 AK310303	-14117	-	AB024597 NM_001894	-94897	-	TSC_hg19_v1_chr22_-_38713439 NM_152221	-95571	-	NM_004981 S72503 U07364	31047	-	CR456507 BC039618 U24056 NM_152868 BC032562	42123	-	TSC_hg19_v1_chr22_+_38864047 AK292102 AL035082 NM_006855 NM_016657 AK222930 BC001277 AK129888 AK223238 AL035081 BC096722 BC098131 BC098156 BC098336 CR456509 CU013108 CU013396 DQ891740 DQ894917 AB528157 CU674644	55141	+	AK307225|LOC400927|400927|TPTE and PTEN homologous inositol lipid phosphatase pseudogene##AB024597|CSNK1E|1454|casein kinase 1, epsilon##NM_001894|CSNK1E|1454|casein kinase 1, epsilon##NM_152221|CSNK1E|1454|casein kinase 1, epsilon##NM_004981|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##S72503|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##U07364|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##CR456507|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##BC039618|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##U24056|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##NM_152868|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##BC032562|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##AK292102|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AL035082|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##NM_006855|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##NM_016657|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AK222930|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC001277|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AK129888|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AK223238|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AL035081|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC096722|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC098131|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC098156|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC098336|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##CR456509|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##CU013108|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##CU013396|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##DQ891740|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##DQ894917|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	0.432191	CTCF.p2:-12:0.432
chr3	127263221	127263322	reg1009682.p2	10.421	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	-351277	+	AB385178 NM_032242 X87832	-555831	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-840194	+	AB037108 NM_016372	36008	-	TSC_hg19_v1_chr3_-_127309338 BC017058	46073	-	BC050711 NM_001136053 AF289568 TSC_hg19_v1_chr3_-_127309565 NM_001142646	46262	-	AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC017058|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC050711|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001136053|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##AF289568|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001142646|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	0.999536	CTCF.p2:1:1.000
chr14	106025042	106025186	reg1007485.p1	10.420	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-32173	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-67478	+	BX248038 NM_001134877	-68595	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	67222	-	BC040042 TSC_hg19_v1_chr14_-_106110945	85809	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	86002	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.811567	CTCF.p2:15:0.812
chr15	68842966	68843084	reg1009765.p2	10.420	+	TSC_hg19_v1_chr15_-_68724505 AF109681 AF137378 NM_001004439 AK292445 AK304778 AK095863	-118527	-	TSC_hg19_v1_chr15_+_68570434 AK290167	-272601	+	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	-272932	+	TSC_hg19_v1_chr15_+_68871402 NM_006091	28318	+	NM_001190456	65853	+	AK289678 NM_001190457	81301	+	AF109681|ITGA11|22801|integrin, alpha 11##AF137378|ITGA11|22801|integrin, alpha 11##NM_001004439|ITGA11|22801|integrin, alpha 11##AK292445|ITGA11|22801|integrin, alpha 11##AK304778|ITGA11|22801|integrin, alpha 11##AK095863|ITGA11|22801|integrin, alpha 11##AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B##AK289678|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190457|CORO2B|10391|coronin, actin binding protein, 2B	0.994793	CTCF.p2:-3:0.995
chr13	36994616	36994766	reg1012659.p1	10.419	+	AK057764 NM_001142294	-50389	-	TSC_hg19_v1_chr13_-_36920854 BX648004 NM_001142295	-73833	-	TSC_hg19_v1_chr13_-_36920622 BC026284 NM_001142296 NM_015087	-74067	-	NM_001111046 NM_001111047 TSC_hg19_v1_chr13_+_37006047 AK301897	11328	+	AK314261 NM_001111045 NM_003914	11717	+	TSC_hg19_v1_chr13_+_37006631 AK225146 U66838 BC035479 BC036346 AB462995 AM393372 BT019577 DQ891303 DQ894488	12002	+	AK057764|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_001142294|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##BX648004|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_001142295|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_001111046|CCNA1|8900|cyclin A1##NM_001111047|CCNA1|8900|cyclin A1##AK301897|CCNA1|8900|cyclin A1##AK314261|CCNA1|8900|cyclin A1##NM_001111045|CCNA1|8900|cyclin A1##NM_003914|CCNA1|8900|cyclin A1##AK225146|CCNA1|8900|cyclin A1##U66838|CCNA1|8900|cyclin A1##BC035479|CCNA1|8900|cyclin A1##BC036346|CCNA1|8900|cyclin A1##AM393372|CCNA1|8900|cyclin A1##BT019577|CCNA1|8900|cyclin A1##DQ891303|CCNA1|8900|cyclin A1##DQ894488|CCNA1|8900|cyclin A1	0.999933	CTCF.p2:2:1.000
chr22	22818529	22818641	reg1011255.p1	10.419	+	TSC_hg19_v1_chr22_+_22786291 L22588	-32296	+	TSC_hg19_v1_chr22_+_22764097 M97923 M97922 BC020233 BC022098 X80306 BC012876 BC073769 BC073770 X57811 AF490938 AJ131057 JF806287 U96044 L26900 L26908 L26901 HM996154 HM996200 HM996261 HM996384 HM996406 HM996445 AB064022 AY686890 HM996105 AB027448 AB063983 AB064005 AB114461 AB114463 AB114465 AB114467 AB114468 AB114470 AB114471 AB114472 AB363370 AB363380 AB363386 AB363387 AB363389 AB363390 AB363392 AB363393 AB363394 AF058065 AF058066 AF058067 AF060124 AF060127 AF063768 AF064495 AF064499 AF320834 AF320844 AF362765 AF394198 AJ238330 AJ276100 AJ298041 AJ399845 AJ399849 AJ399852 AJ399856 AJ399867 AJ399868 AJ399869 AM040515 AM040578 AM181362 AM181366 AY028996 AY942050 AY942088 AY942095 AY942098 AY942100 AY942127 DQ098691 DQ098693 DQ098745 DQ098749 DQ098786 DQ187499 DQ187503 DQ187571 DQ187623 DQ187624 DQ187625 DQ187626 DQ187694 DQ187719 DQ187722 DQ187723 DQ322742 DQ322810 DQ322821 DQ322822 DQ322823 DQ322874 DQ323004 DQ490721 DQ490722 DQ490723 DQ840923 DQ840924 DQ840925 DQ840930 DQ840933 DQ840937 DQ841069 DQ841085 DQ841092 DQ841094 DQ841095 DQ841098 DQ841102 DQ841104 DQ841105 DQ841106 DQ841107 DQ841108 DQ841109 DQ841110 DQ841111 DQ841112 DQ841114 DQ841115 DQ841116 DQ841117 EF589403 EF589431 EF589450 EF589512 EF589542 EF589558 EF710775 EF710776 EF710777 EF710778 EF710779 EF710780 EF710781 EF710782 EF711006 EF711007 EF711008 EF711009 EU599322 FJ385471 S73120 X91132 Z18835 DQ098692 X91133 DQ098695 HM996447 U09885 AF044481 AF044482 AF044483 AJ580928 X83712 X83713 AB114466 AY942023 AY062351 AY998675 DQ098694 DQ098812 DQ098765 AJ241371 X92997 X93002 X93004 AJ298616 U70235 AY062352 AY998672 AF103597 AF103703 AF103635 FJ385549 AF032355 AF103626 AF103705 AF103676 AF043584 AF103615 AF103648 AF103650 AF103714 AF043585 AF043587 AF043588 AF052823 AF043583 AY180392 AF043592 S42404 AF043589 AF043591	-54341	+	TSC_hg19_v1_chr22_+_22758538 GU179344	-60021	+	TSC_hg19_v1_chr22_-_22863061 BC040020	44496	-	AK097608 NM_080764	44919	-	BC053901 AK093108 NM_080740	56019	-	BC040020|ZNF280B|140883|zinc finger protein 280B##AK097608|ZNF280B|140883|zinc finger protein 280B##NM_080764|ZNF280B|140883|zinc finger protein 280B##BC053901|ZNF280A|129025|zinc finger protein 280A##AK093108|ZNF280A|129025|zinc finger protein 280A##NM_080740|ZNF280A|129025|zinc finger protein 280A	0.99907	CTCF.p2:-11:0.999
chr10	26164637	26164755	reg1012205.p1	10.418	+	AY528411 NM_020752	-700407	+	NM_024838 TSC_hg19_v1_chr10_+_25305540 AK125249 BC035132 BX647989	-859146	+	CU693144 DQ892076 DQ895269 BC064597 AK095021 NM_145010 AY454125 AK292495 BC026165	-859722	-	NM_017433	58305	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	58484	+	NM_000818 NM_001134366	340539	+	AY528411|GPR158|57512|G protein-coupled receptor 158##NM_020752|GPR158|57512|G protein-coupled receptor 158##NM_024838|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AK125249|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BC035132|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BX647989|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##DQ892076|ENKUR|219670|enkurin, TRPC channel interacting protein##DQ895269|ENKUR|219670|enkurin, TRPC channel interacting protein##AK095021|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_145010|ENKUR|219670|enkurin, TRPC channel interacting protein##AY454125|ENKUR|219670|enkurin, TRPC channel interacting protein##AK292495|ENKUR|219670|enkurin, TRPC channel interacting protein##BC026165|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_017433|MYO3A|53904|myosin IIIA##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	0.0	
chr9	613982	614100	reg1005217.p2	10.418	+	TSC_hg19_v1_chr9_+_504732 BX648931 AL832454 NM_015158 AK292989 AL833161 AK290028 AB205106	-109293	+	TSC_hg19_v1_chr9_+_273045 HM991479 NM_001190458 NM_001193536 AK093572 AX748209 HM991480 BC045629 AK310555 BC130518 BC143929	-340988	+	NM_152569	-398149	-	AK311119 AB205111 TSC_hg19_v1_chr9_+_684289	70203	+	AB205112 TSC_hg19_v1_chr9_+_686677	72625	+	TSC_hg19_v1_chr9_+_706828 BC038116 NM_153186	92789	+	BX648931|KANK1|23189|KN motif and ankyrin repeat domains 1##AL832454|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_015158|KANK1|23189|KN motif and ankyrin repeat domains 1##AK292989|KANK1|23189|KN motif and ankyrin repeat domains 1##AL833161|KANK1|23189|KN motif and ankyrin repeat domains 1##AK290028|KANK1|23189|KN motif and ankyrin repeat domains 1##AB205106|KANK1|23189|KN motif and ankyrin repeat domains 1##HM991479|DOCK8|81704|dedicator of cytokinesis 8##NM_001190458|DOCK8|81704|dedicator of cytokinesis 8##NM_001193536|DOCK8|81704|dedicator of cytokinesis 8##AK093572|DOCK8|81704|dedicator of cytokinesis 8##HM991480|DOCK8|81704|dedicator of cytokinesis 8##BC045629|DOCK8|81704|dedicator of cytokinesis 8##AK310555|DOCK8|81704|dedicator of cytokinesis 8##BC130518|DOCK8|81704|dedicator of cytokinesis 8##BC143929|DOCK8|81704|dedicator of cytokinesis 8##NM_152569|C9orf66|157983|chromosome 9 open reading frame 66##BC038116|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_153186|KANK1|23189|KN motif and ankyrin repeat domains 1	0.088118	
chr3	189679464	189679594	reg1010938.p1	10.417	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	-172011	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-330270	+	AK125682 NM_198485 BC101550 BC101552	-789718	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	159166	-	NM_018192	159378	-	NM_001134418	160696	-	AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##NM_001134418|LEPREL1|55214|leprecan-like 1	0.98279	CTCF.p2:-11:0.983
chr6	18122901	18123042	reg1012354.p2	10.417	+	AY324850 BC103888 BC103889 BC103890 NM_198586	-121	-	TSC_hg19_v1_chr6_-_17987867 BC062673 NM_001105566 NM_001105567 NM_001105568 NM_001243423 NM_022113	-135105	-	AJ291578 AJ291579 BC127115 BC127116 AY014403 AY014404 TSC_hg19_v1_chr6_-_17987786	-135211	-	S62904 AK310420 TSC_hg19_v1_chr6_-_18155309 U12387 BC005339 BC009596 NM_000367	32357	-	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	32684	+	X64229 TSC_hg19_v1_chr6_-_18264759 BC012442 AK312616 AK298089 AK294079 BC035259 AK297749 NM_001134709 NM_003472	141750	-	AY324850|NHLRC1|378884|NHL repeat containing 1##BC103888|NHLRC1|378884|NHL repeat containing 1##BC103889|NHLRC1|378884|NHL repeat containing 1##BC103890|NHLRC1|378884|NHL repeat containing 1##NM_198586|NHLRC1|378884|NHL repeat containing 1##BC062673|KIF13A|63971|kinesin family member 13A##NM_001105566|KIF13A|63971|kinesin family member 13A##NM_001105567|KIF13A|63971|kinesin family member 13A##NM_001105568|KIF13A|63971|kinesin family member 13A##NM_001243423|KIF13A|63971|kinesin family member 13A##NM_022113|KIF13A|63971|kinesin family member 13A##AJ291578|KIF13A|63971|kinesin family member 13A##AJ291579|KIF13A|63971|kinesin family member 13A##BC127115|KIF13A|63971|kinesin family member 13A##BC127116|KIF13A|63971|kinesin family member 13A##AY014403|KIF13A|63971|kinesin family member 13A##AY014404|KIF13A|63971|kinesin family member 13A##S62904|TPMT|7172|thiopurine S-methyltransferase##AK310420|TPMT|7172|thiopurine S-methyltransferase##U12387|TPMT|7172|thiopurine S-methyltransferase##BC005339|TPMT|7172|thiopurine S-methyltransferase##BC009596|TPMT|7172|thiopurine S-methyltransferase##NM_000367|TPMT|7172|thiopurine S-methyltransferase##BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B##X64229|DEK|7913|DEK oncogene##BC012442|DEK|7913|DEK oncogene##AK312616|DEK|7913|DEK oncogene##AK298089|DEK|7913|DEK oncogene##AK294079|DEK|7913|DEK oncogene##BC035259|DEK|7913|DEK oncogene##AK297749|DEK|7913|DEK oncogene##NM_001134709|DEK|7913|DEK oncogene##NM_003472|DEK|7913|DEK oncogene	0.86456	CTCF.p2:8:0.865
chr18	52650422	52650567	reg1010598.p2	10.416	+	AF273051 TSC_hg19_v1_chr18_-_52626693 BC029508 NM_025214	-23807	-	AK058097 NM_001143829	-25216	-	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	-154756	+	FR748222 NM_001243236	319288	-	M74718 FR748220 FR748221 AK300038 NM_001243234 NM_001243235	338508	-	FR748209 M74720 AB209741 TSC_hg19_v1_chr18_-_53068920 AK300636	418344	-	AF273051|CCDC68|80323|coiled-coil domain containing 68##BC029508|CCDC68|80323|coiled-coil domain containing 68##NM_025214|CCDC68|80323|coiled-coil domain containing 68##AK058097|CCDC68|80323|coiled-coil domain containing 68##NM_001143829|CCDC68|80323|coiled-coil domain containing 68##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family##FR748222|TCF4|6925|transcription factor 4##NM_001243236|TCF4|6925|transcription factor 4##M74718|TCF4|6925|transcription factor 4##FR748220|TCF4|6925|transcription factor 4##FR748221|TCF4|6925|transcription factor 4##AK300038|TCF4|6925|transcription factor 4##NM_001243234|TCF4|6925|transcription factor 4##NM_001243235|TCF4|6925|transcription factor 4##FR748209|TCF4|6925|transcription factor 4##AB209741|TCF4|6925|transcription factor 4##AK300636|TCF4|6925|transcription factor 4	0.998381	CTCF.p2:4:0.998
chr10	69539782	69539910	reg1009844.p2	10.415	+	AF091606 AK313882 NM_013266	-83909	-	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	-114450	-	NM_178011 BX640611 AY358315 BC111492	-854031	+	CR457184 AF176013 BC017018 AK289537 AF176012 NM_021800 NM_201262	58006	-	TSC_hg19_v1_chr10_+_69644413 AF083106 NM_012238 AF235040	104561	+	AL136741 BC012499 TSC_hg19_v1_chr10_+_69644874	104946	+	AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##CR457184|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176013|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##BC017018|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AK289537|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176012|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_021800|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_201262|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF083106|SIRT1|23411|sirtuin 1##NM_012238|SIRT1|23411|sirtuin 1##AF235040|SIRT1|23411|sirtuin 1##AL136741|SIRT1|23411|sirtuin 1##BC012499|SIRT1|23411|sirtuin 1	0.999806	CTCF.p2:16:1.000
chr18	46203300	46203403	reg1007408.p1	10.415	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-137578	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-267642	-	AM988836 AK296709 NM_001039360 EF120357	-539652	-	AK131394 NM_001190823	265796	-	AK301535 NM_001190822	272351	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	273416	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.989884	CTCF.p2:-19:0.990
chr4	64583218	64583350	reg1012325.p1	10.415	+	NM_015236	-2220446	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-2516309	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-6606716	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	691812	-	AK307826 NM_004439 NM_182472	1952368	-	TSC_hg19_v1_chr4_-_66536182 AB209375	1952913	-	NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.920724	CTCF.p2:6:0.921
chr13	52775605	52775715	reg1009249.p1	10.414	+	TSC_hg19_v1_chr13_-_52768573 AK307345 AK307124 AK309380 BX648914 AK027536	-7101	-	NM_001146099 NM_002498	-41665	-	NM_152720 TSC_hg19_v1_chr13_-_52733672 BC019916 AK290259	-41934	-	AB044385 TSC_hg19_v1_chr13_-_52980275 BC063842 AK298974 AK315087 AY358149	204618	-	AK096289 NM_018676 NM_199263	204968	-	TSC_hg19_v1_chr13_-_53024744 AF151903 BC050439 BC037279 AK289740 NM_016075	249107	-	AK307345|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK307124|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK309380|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##BX648914|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK027536|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##AB044385|THSD1|55901|thrombospondin, type I, domain containing 1##BC063842|THSD1|55901|thrombospondin, type I, domain containing 1##AK298974|THSD1|55901|thrombospondin, type I, domain containing 1##AK315087|THSD1|55901|thrombospondin, type I, domain containing 1##AY358149|THSD1|55901|thrombospondin, type I, domain containing 1##AK096289|THSD1|55901|thrombospondin, type I, domain containing 1##NM_018676|THSD1|55901|thrombospondin, type I, domain containing 1##NM_199263|THSD1|55901|thrombospondin, type I, domain containing 1##AF151903|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##BC050439|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##BC037279|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##AK289740|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)##NM_016075|VPS36|51028|vacuolar protein sorting 36 homolog (S. cerevisiae)	0.99036	CTCF.p2:21:0.990
chr6	149511497	149511612	reg1009951.p1	10.414	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-443345	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-847363	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-847564	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	127549	+	AK315038 NM_015093 AK307650	127887	+	AY340238 NM_001002255 BC130305 HQ258040	209954	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.807485	CTCF.p2:-3:0.807
chr8	101693196	101693344	reg1011367.p1	10.414	+	AK093906 AX748361 NM_152628	-31378	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	-121330	-	TSC_hg19_v1_chr8_-_101322306 NM_183419	-370985	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	40536	-	AK095194 AK298990 TSC_hg19_v1_chr8_-_101734267	40951	-	BC015958 BC023217 BC023520 TSC_hg19_v1_chr8_-_101734301	41025	-	AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##NM_183419|RNF19A|25897|ring finger protein 19A##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK095194|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK298990|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC015958|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023217|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023520|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr11	6044361	6044471	reg1010486.p1	10.413	+	NM_001005179 BC136986	-20016	-	BC137343 NM_001005173	-36202	-	NM_001146033	-54693	-	BC136904 BC136911 NM_001001917	4554	-	BC136879 BC136880 NM_001005181	84544	+	NM_001004052 BC136732 BC136733	147180	-	NM_001005179|OR56A4|120793|olfactory receptor, family 56, subfamily A, member 4##BC136986|OR56A4|120793|olfactory receptor, family 56, subfamily A, member 4##BC137343|OR52L1|338751|olfactory receptor, family 52, subfamily L, member 1##NM_001005173|OR52L1|338751|olfactory receptor, family 52, subfamily L, member 1##NM_001146033|OR56A5|390084|olfactory receptor, family 56, subfamily A, member 5##BC136904|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1##BC136911|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1##NM_001001917|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1##BC136879|OR56B4|196335|olfactory receptor, family 56, subfamily B, member 4##BC136880|OR56B4|196335|olfactory receptor, family 56, subfamily B, member 4##NM_001005181|OR56B4|196335|olfactory receptor, family 56, subfamily B, member 4##NM_001004052|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2##BC136732|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2##BC136733|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2	0.23004	CTCF.p2:-18:0.230
chr5	176830835	176830961	reg1007277.p1	10.413	+	BC132952 BC132954 NM_001029886	-3262	-	AK096088 NM_001167579 NM_003052 TSC_hg19_v1_chr5_+_176811434 AK298299 BC053349 BC035294 BC050385 L13258	-19456	+	TSC_hg19_v1_chr5_+_176794314 AK098150	-36585	+	TSC_hg19_v1_chr5_-_176831183 BT007350	327	-	BC012390 TSC_hg19_v1_chr5_-_176831506	562	-	M11723 M31315 TSC_hg19_v1_chr5_-_176836522	5607	-	BC132952|PFN3|345456|profilin 3##BC132954|PFN3|345456|profilin 3##NM_001029886|PFN3|345456|profilin 3##AK096088|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_001167579|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_003052|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK298299|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC053349|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC035294|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC050385|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##L13258|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK098150|RGS14|10636|regulator of G-protein signaling 14##BT007350|F12|2161|coagulation factor XII (Hageman factor)##BC012390|F12|2161|coagulation factor XII (Hageman factor)##M11723|F12|2161|coagulation factor XII (Hageman factor)##M31315|F12|2161|coagulation factor XII (Hageman factor)	1.000629	CTCF.p2:0:0.979
chr14	55030844	55030967	reg1008680.p1	10.412	+	AK315318 AK289478 TSC_hg19_v1_chr14_+_54976623 NM_006568 BC015063 U66469 CU677207 EU832831 GQ129438	-54294	+	TSC_hg19_v1_chr14_-_54955728 AB001106 BX647679 NM_004124	-75150	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	-75220	-	NM_001161576 NM_015589 BC057838 TSC_hg19_v1_chr14_+_55034359	3439	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	3731	+	TSC_hg19_v1_chr14_+_55168831 AB028976	137984	+	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1##AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1##NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1##BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1##U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1##EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1##GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1##AB001106|GMFB|2764|glia maturation factor, beta##BX647679|GMFB|2764|glia maturation factor, beta##NM_004124|GMFB|2764|glia maturation factor, beta##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta##NM_001161576|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_015589|SAMD4A|23034|sterile alpha motif domain containing 4A##BC057838|SAMD4A|23034|sterile alpha motif domain containing 4A##AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A	0.999351	CTCF.p2:2:0.999
chr20	30150757	30150874	reg1010995.p1	10.412	+	TSC_hg19_v1_chr20_+_30135200 BC053868	-15581	+	TSC_hg19_v1_chr20_+_30102316 AJ420895 DQ896206 CU687568 AF515663	-48482	+	AF172086 BC062595 TSC_hg19_v1_chr20_+_30102287 AF483215 AJ345029 AK074686	-48534	+	TSC_hg19_v1_chr20_+_30193091 NM_002165 NM_181353 AK313786 BC012420 BC000613 S78986 X77956 AK291152 D13889 D13890 S78825 AB463776 CU680316 DQ891293 DQ893342 DQ894477 DQ896657 EU176458 EU176468 EU176808 BT007443	42321	+	AF257180 NM_032609 BC057779	74887	+	BC032024 TSC_hg19_v1_chr20_-_30288101	137282	-	AJ420895|HM13|81502|histocompatibility (minor) 13##DQ896206|HM13|81502|histocompatibility (minor) 13##AF515663|HM13|81502|histocompatibility (minor) 13##AF172086|HM13|81502|histocompatibility (minor) 13##BC062595|HM13|81502|histocompatibility (minor) 13##AF483215|HM13|81502|histocompatibility (minor) 13##AJ345029|HM13|81502|histocompatibility (minor) 13##AK074686|HM13|81502|histocompatibility (minor) 13##NM_002165|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##NM_181353|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK313786|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC012420|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC000613|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78986|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##X77956|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK291152|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13889|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13890|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78825|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ891293|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ893342|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ894477|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ896657|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176458|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176468|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176808|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BT007443|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AF257180|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_032609|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##BC057779|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)	0.921492	CTCF.p2:-6:0.921
chr20	44803312	44803400	reg1009036.p1	10.412	+	TSC_hg19_v1_chr20_+_44746952 AK222896 AJ300189 AB209660 AB590222 AX781593 AY225405 BT019901 DQ891804 DQ894988	-56391	+	TSC_hg19_v1_chr20_+_44746923 NM_001250 NM_152854 BC064518 BC012419 X60592	-56440	+	TSC_hg19_v1_chr20_-_44718581 NM_020967	-84745	-	BC136526 NM_021248	76972	-	TSC_hg19_v1_chr20_-_44937138 AK289584	133814	-	TSC_hg19_v1_chr20_-_44993030 AK300798 AF132949 AK222928 AK301022 BC021138 BC014191 AF455052 AK300207 AK315726 NM_015945 NM_173073 NM_173179	189679	-	AK222896|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AJ300189|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AB209660|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AY225405|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BT019901|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ891804|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ894988|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_001250|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_152854|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC064518|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC012419|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_020967|NCOA5|57727|nuclear receptor coactivator 5##BC136526|CDH22|64405|cadherin 22, type 2##NM_021248|CDH22|64405|cadherin 22, type 2##AK289584|CDH22|64405|cadherin 22, type 2##AK300798|SLC35C2|51006|solute carrier family 35, member C2##AF132949|SLC35C2|51006|solute carrier family 35, member C2##AK222928|SLC35C2|51006|solute carrier family 35, member C2##AK301022|SLC35C2|51006|solute carrier family 35, member C2##BC021138|SLC35C2|51006|solute carrier family 35, member C2##BC014191|SLC35C2|51006|solute carrier family 35, member C2##AF455052|SLC35C2|51006|solute carrier family 35, member C2##AK300207|SLC35C2|51006|solute carrier family 35, member C2##AK315726|SLC35C2|51006|solute carrier family 35, member C2##NM_015945|SLC35C2|51006|solute carrier family 35, member C2##NM_173073|SLC35C2|51006|solute carrier family 35, member C2##NM_173179|SLC35C2|51006|solute carrier family 35, member C2	0.983812	CTCF.p2:14:0.984
chr2	198919154	198919268	reg1011802.p1	10.411	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	-249841	+	NM_197970 AK302817	-268225	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-269171	-	TSC_hg19_v1_chr2_-_200213802 AK025127	1294639	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	1401591	-	TSC_hg19_v1_chr2_-_200322238 AJ438951	1403039	-	AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2##AJ438951|SATB2|23314|SATB homeobox 2	0.978771	CTCF.p2:4:0.979
chr19	39035147	39035286	reg1009627.p2	10.410	+	TSC_hg19_v1_chr19_+_38924330 NM_000540 NM_001042723 J05200	-110872	+	AF448437 BC146669 BC150202 BC142721 BC151216 TSC_hg19_v1_chr19_-_38916860 AX721071 AY048119 AY048120 AY048121 FJ768677 FJ768678 FJ768679 FJ768680 FJ768681 FJ768682 NM_001146202 NM_001146203 NM_001146204 NM_001146205 NM_001146206 NM_001146207 NM_170604	-118344	-	TSC_hg19_v1_chr19_+_38893839 BC080606 AK128745	-141315	+	AB527182 TSC_hg19_v1_chr19_-_39108593 NM_001042600 NM_007181	73372	-	TSC_hg19_v1_chr19_+_39109725 NM_013234 AF077051 AF085358 AB019392 AY245432	74497	+	TSC_hg19_v1_chr19_+_39109825 BC007559 AK298635	74600	+	NM_000540|RYR1|6261|ryanodine receptor 1 (skeletal)##NM_001042723|RYR1|6261|ryanodine receptor 1 (skeletal)##J05200|RYR1|6261|ryanodine receptor 1 (skeletal)##AF448437|RASGRP4|115727|RAS guanyl releasing protein 4##BC146669|RASGRP4|115727|RAS guanyl releasing protein 4##BC150202|RASGRP4|115727|RAS guanyl releasing protein 4##BC142721|RASGRP4|115727|RAS guanyl releasing protein 4##BC151216|RASGRP4|115727|RAS guanyl releasing protein 4##AY048119|RASGRP4|115727|RAS guanyl releasing protein 4##AY048120|RASGRP4|115727|RAS guanyl releasing protein 4##AY048121|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768677|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768678|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768679|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768680|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768681|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768682|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146202|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146203|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146204|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146205|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146206|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146207|RASGRP4|115727|RAS guanyl releasing protein 4##NM_170604|RASGRP4|115727|RAS guanyl releasing protein 4##BC080606|FAM98C|147965|family with sequence similarity 98, member C##AK128745|FAM98C|147965|family with sequence similarity 98, member C##NM_001042600|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_007181|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_013234|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF077051|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF085358|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AB019392|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AY245432|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##BC007559|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK298635|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K	0.999698	CTCF.p2:-17:1.000
chr6	16514678	16514829	reg1012137.p1	10.410	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-275902	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-371443	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-385316	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	246944	-	NM_001190766	587735	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	767101	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.106001	
chr1	158216578	158216733	reg1012795.p1	10.409	+	AK225996 TSC_hg19_v1_chr1_+_158150684 AK310541 J04142 AK310749 AB590619 CU693322	-65871	+	BC027926 NM_001766	-66919	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	-253267	+	M28825 NM_001763	7271	+	AK226024 NM_001765	42905	+	CU686844 AB590508 AK303330 BC074747 AK310617 BC069481 BC104216 BC104217 M28826 NM_001764	84610	-	AK225996|CD1D|912|CD1d molecule##J04142|CD1D|912|CD1d molecule##AK310749|CD1D|912|CD1d molecule##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule##BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##M28825|CD1A|909|CD1a molecule##NM_001763|CD1A|909|CD1a molecule##AK226024|CD1C|911|CD1c molecule##NM_001765|CD1C|911|CD1c molecule##AK303330|CD1B|910|CD1b molecule##BC074747|CD1B|910|CD1b molecule##AK310617|CD1B|910|CD1b molecule##BC069481|CD1B|910|CD1b molecule##BC104216|CD1B|910|CD1b molecule##BC104217|CD1B|910|CD1b molecule##M28826|CD1B|910|CD1b molecule##NM_001764|CD1B|910|CD1b molecule	0.990834	CTCF.p2:-14:0.991
chr1	169317786	169317924	reg1010330.p1	10.409	+	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	-241886	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	-619426	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-772063	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	19237	-	NM_003666 AF288161 U79751 AK223533	19368	+	TSC_hg19_v1_chr1_+_169337450 AK307151 AK291725 BC020716	19594	+	AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_003666|BLZF1|8548|basic leucine zipper nuclear factor 1##AF288161|BLZF1|8548|basic leucine zipper nuclear factor 1##U79751|BLZF1|8548|basic leucine zipper nuclear factor 1##AK223533|BLZF1|8548|basic leucine zipper nuclear factor 1##AK307151|BLZF1|8548|basic leucine zipper nuclear factor 1##AK291725|BLZF1|8548|basic leucine zipper nuclear factor 1##BC020716|BLZF1|8548|basic leucine zipper nuclear factor 1	0.995154	CTCF.p2:13:0.995
chr15	81558290	81558416	reg1005977.p1	10.409	+	NM_172217 AY324389	-40664	+	AK124725 NM_001172128 AK124565 AK131530	-69135	+	AK302120 BC062471 NM_173528 AK307565	-131726	+	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	30951	+	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	58141	-	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	108132	-	NM_172217|IL16|3603|interleukin 16##AY324389|IL16|3603|interleukin 16##AK124725|IL16|3603|interleukin 16##NM_001172128|IL16|3603|interleukin 16##AK124565|IL16|3603|interleukin 16##AK131530|IL16|3603|interleukin 16##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3	0.738121	CTCF.p2:-1:0.738
chr17	8689248	8689389	reg1013524.p1	10.409	+	BC146949 BC146966 BC171861 NM_001128076	-27442	-	BC029224 AK057296 NM_001158261 NM_144681	-41190	-	TSC_hg19_v1_chr17_-_8534040 M69181 AB210026 BC144668 BC150634 NM_005964 U34304 AB621820	-155272	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	13234	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	81666	-	AY725853 AF128881 NM_014308	126498	-	BC146949|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC146966|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC171861|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##NM_001128076|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC029224|CCDC42|146849|coiled-coil domain containing 42##AK057296|CCDC42|146849|coiled-coil domain containing 42##NM_001158261|CCDC42|146849|coiled-coil domain containing 42##NM_144681|CCDC42|146849|coiled-coil domain containing 42##M69181|MYH10|4628|myosin, heavy chain 10, non-muscle##AB210026|MYH10|4628|myosin, heavy chain 10, non-muscle##BC144668|MYH10|4628|myosin, heavy chain 10, non-muscle##BC150634|MYH10|4628|myosin, heavy chain 10, non-muscle##NM_005964|MYH10|4628|myosin, heavy chain 10, non-muscle##U34304|MYH10|4628|myosin, heavy chain 10, non-muscle##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5	0.798323	CTCF.p2:-1:0.798
chr4	154239984	154240111	reg1012884.p1	10.409	+	TSC_hg19_v1_chr4_+_154178530 BC025417	-61508	+	TSC_hg19_v1_chr4_+_154125594 AK308731 NM_015271 AB011089 AF220018	-114442	+	BC011052 NM_001130067	-165778	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	25740	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	25828	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	147445	+	BC025417|TRIM2|23321|tripartite motif containing 2##AK308731|TRIM2|23321|tripartite motif containing 2##NM_015271|TRIM2|23321|tripartite motif containing 2##AB011089|TRIM2|23321|tripartite motif containing 2##AF220018|TRIM2|23321|tripartite motif containing 2##BC011052|TRIM2|23321|tripartite motif containing 2##NM_001130067|TRIM2|23321|tripartite motif containing 2##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922	0.173436	
chr8	86985722	86985821	reg1008335.p1	10.409	+	NM_172239	-196466	-	NM_172239	-410046	-	NM_000067 AF015039 TSC_hg19_v1_chr8_+_86376232 AK312978 BC011949 J03037 Y00339 M36532 DQ891320 DQ894504 AB591010 CU680124 CR536526 CR541875	-609551	+	AY037806 HQ258398 NM_033126 BC126180 BC126182 BC144195	96116	-	BC065207 TSC_hg19_v1_chr8_+_87111138 AK096027 NM_152565 AY079172	125373	+	AJ417661 BC125165 BC125166 AK055815 NM_138817 BC029436	256787	-	NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1##NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1##NM_000067|CA2|760|carbonic anhydrase II##AF015039|CA2|760|carbonic anhydrase II##AK312978|CA2|760|carbonic anhydrase II##BC011949|CA2|760|carbonic anhydrase II##J03037|CA2|760|carbonic anhydrase II##Y00339|CA2|760|carbonic anhydrase II##M36532|CA2|760|carbonic anhydrase II##DQ891320|CA2|760|carbonic anhydrase II##DQ894504|CA2|760|carbonic anhydrase II##CR536526|CA2|760|carbonic anhydrase II##CR541875|CA2|760|carbonic anhydrase II##AY037806|PSKH2|85481|protein serine kinase H2##HQ258398|PSKH2|85481|protein serine kinase H2##NM_033126|PSKH2|85481|protein serine kinase H2##BC126180|PSKH2|85481|protein serine kinase H2##BC126182|PSKH2|85481|protein serine kinase H2##BC144195|PSKH2|85481|protein serine kinase H2##BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AJ417661|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC125165|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC125166|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##AK055815|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##NM_138817|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC029436|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13	0.430496	CTCF.p2:22:0.417
chr10	92352798	92352921	reg1010136.p1	10.408	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-854092	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-891484	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-947535	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	264587	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	264874	-	TSC_hg19_v1_chr10_+_92631241 BC006991	278398	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.016856	
chr5	44536902	44537027	reg1011975.p1	10.407	+	AF508782 AB002097 AF411527 BC069561 CR541665 CR541688 GQ351295 HQ258011 NM_004465 U67918 BC105023 BC105021 BC143772	-148199	-	Z50101 AB385177 AM392664 AM393615 TSC_hg19_v1_chr5_+_43609371	-927648	+	TSC_hg19_v1_chr5_+_43603313 BC110543 BC110544	-933610	+	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	272063	+	AF064876 TSC_hg19_v1_chr5_-_45695947	1158927	-	AF488549 NM_021072	1159255	-	AF508782|FGF10|2255|fibroblast growth factor 10##AB002097|FGF10|2255|fibroblast growth factor 10##AF411527|FGF10|2255|fibroblast growth factor 10##BC069561|FGF10|2255|fibroblast growth factor 10##CR541665|FGF10|2255|fibroblast growth factor 10##CR541688|FGF10|2255|fibroblast growth factor 10##GQ351295|FGF10|2255|fibroblast growth factor 10##HQ258011|FGF10|2255|fibroblast growth factor 10##NM_004465|FGF10|2255|fibroblast growth factor 10##U67918|FGF10|2255|fibroblast growth factor 10##BC105023|FGF10|2255|fibroblast growth factor 10##BC105021|FGF10|2255|fibroblast growth factor 10##Z50101|NNT|23530|nicotinamide nucleotide transhydrogenase##AM392664|NNT|23530|nicotinamide nucleotide transhydrogenase##AM393615|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110543|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110544|NNT|23530|nicotinamide nucleotide transhydrogenase##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1	0.999415	CTCF.p2:-10:0.999
chr15	43882486	43882611	reg1010620.p1	10.406	+	BC050263 BX538022 BX647814 AK307438 NM_001130858 NM_001130859 NM_001190214	-130	-	AF543190 AF502586 AF502588 NM_014659 AB002375 AF502587 AF502589	-5482	-	NM_002373 TSC_hg19_v1_chr15_+_43809825 AK291052 BC055312 BC094702 BC010470	-72719	+	NM_020990 AK311698 AK316124	2724	+	AK308370 BC129931 NM_153700	28430	-	BC028728 NM_054020 NM_172095 NM_172097 AK122607 BC064387 BX648099 TSC_hg19_v1_chr15_-_43941088	58514	-	BC050263|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##BX538022|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##BX647814|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AK307438|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##NM_001130858|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##NM_001130859|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##NM_001190214|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AF543190|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AF502586|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AF502588|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##NM_014659|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AB002375|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AF502587|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AF502589|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##NM_002373|MAP1A|4130|microtubule-associated protein 1A##AK291052|MAP1A|4130|microtubule-associated protein 1A##BC055312|MAP1A|4130|microtubule-associated protein 1A##BC094702|MAP1A|4130|microtubule-associated protein 1A##BC010470|MAP1A|4130|microtubule-associated protein 1A##NM_020990|CKMT1B|1159|creatine kinase, mitochondrial 1B##AK316124|CKMT1A|548596|creatine kinase, mitochondrial 1A##AK308370|STRC|161497|stereocilin##BC129931|STRC|161497|stereocilin##NM_153700|STRC|161497|stereocilin##BC028728|CATSPER2|117155|cation channel, sperm associated 2##NM_054020|CATSPER2|117155|cation channel, sperm associated 2##NM_172095|CATSPER2|117155|cation channel, sperm associated 2##NM_172097|CATSPER2|117155|cation channel, sperm associated 2##AK122607|CATSPER2|117155|cation channel, sperm associated 2##BC064387|CATSPER2|117155|cation channel, sperm associated 2##BX648099|CATSPER2|117155|cation channel, sperm associated 2	0.661142	CTCF.p2:-14:0.661
chr13	24290067	24290223	reg1011642.p1	10.405	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	-136613	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-145690	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-282305	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	172871	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	173369	-	NM_001135816 BC142999	173447	+	BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.562127	CTCF.p2:-29:0.562
chr17	78962900	78963036	reg1010753.p1	10.404	+	TSC_hg19_v1_chr17_+_78935064 BC073898	-27836	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-444150	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-444319	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	2673	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	2726	+	AK124762 TSC_hg19_v1_chr17_-_79008489 AK056555	45479	-	BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6##AK124762|FLJ90757|440465|uncharacterized LOC440465##AK056555|FLJ90757|440465|uncharacterized LOC440465	0.15803	
chr1	85190156	85190267	reg1010490.p1	10.404	+	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-34135	-	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-150105	-	TSC_hg19_v1_chr1_-_84972262 NM_005274	-217942	-	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	168675	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	272497	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	323934	-	AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##NM_005274|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3	0.02389	
chr5	2017841	2017963	reg1012773.p1	10.404	+	AB527533 BC110912 BC144204 BC136505 BC136506 AF124733 NM_016358	-135081	-	TSC_hg19_v1_chr5_+_1801520 NM_004553 AK022503 BC038664 AF044959 BC046155 CR456880 HQ257915	-216390	+	TSC_hg19_v1_chr5_-_1799952 AK312001 BC104652 EF036487 NM_032479	-217930	-	AB188492 NM_001134222 NM_033267 BC065189	733869	-	AY249325 NM_178569 BC101608 BC101634 BC143638 BC143639 BC143640 BC171731	734399	+	AY335938 NM_024337	1578265	+	BC110912|IRX4|50805|iroquois homeobox 4##BC144204|IRX4|50805|iroquois homeobox 4##BC136505|IRX4|50805|iroquois homeobox 4##BC136506|IRX4|50805|iroquois homeobox 4##AF124733|IRX4|50805|iroquois homeobox 4##NM_016358|IRX4|50805|iroquois homeobox 4##NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK312001|MRPL36|64979|mitochondrial ribosomal protein L36##BC104652|MRPL36|64979|mitochondrial ribosomal protein L36##EF036487|MRPL36|64979|mitochondrial ribosomal protein L36##NM_032479|MRPL36|64979|mitochondrial ribosomal protein L36##AB188492|IRX2|153572|iroquois homeobox 2##NM_001134222|IRX2|153572|iroquois homeobox 2##NM_033267|IRX2|153572|iroquois homeobox 2##BC065189|IRX2|153572|iroquois homeobox 2##AY249325|C5orf38|153571|chromosome 5 open reading frame 38##NM_178569|C5orf38|153571|chromosome 5 open reading frame 38##BC101608|C5orf38|153571|chromosome 5 open reading frame 38##BC101634|C5orf38|153571|chromosome 5 open reading frame 38##BC143638|C5orf38|153571|chromosome 5 open reading frame 38##BC143639|C5orf38|153571|chromosome 5 open reading frame 38##BC143640|C5orf38|153571|chromosome 5 open reading frame 38##BC171731|C5orf38|153571|chromosome 5 open reading frame 38##AY335938|IRX1|79192|iroquois homeobox 1##NM_024337|IRX1|79192|iroquois homeobox 1	0.857326	CTCF.p2:-3:0.857
chrX	39590110	39590227	reg1011615.p1	10.404	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-926628	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-926708	+	BC008908 NM_021242	-927096	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	366524	-	BC114220 NM_001123383 NM_001123384	446413	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	850018	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.816191	CTCF.p2:-5:0.816
chr11	14476699	14476820	reg1010903.p2	10.402	+	AK300103 NM_001177314	-90708	-	TSC_hg19_v1_chr11_-_14380730 BC013106 AK299606 AK313976 NM_012250	-96082	-	AK309550 AK309683 NM_001177315 NM_001102669	-96708	-	TSC_hg19_v1_chr11_-_14521358 AF084457 AF111807 BC012572 AL136593	44591	-	TSC_hg19_v1_chr11_-_14521392 BC037280 NM_016451 NM_001144062 NM_001144061	44654	-	TSC_hg19_v1_chr11_-_14541879 BC022372 D00759	65117	-	AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##BC013106|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK299606|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK313976|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_012250|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AF084457|COPB1|1315|coatomer protein complex, subunit beta 1##AF111807|COPB1|1315|coatomer protein complex, subunit beta 1##BC012572|COPB1|1315|coatomer protein complex, subunit beta 1##AL136593|COPB1|1315|coatomer protein complex, subunit beta 1##BC037280|COPB1|1315|coatomer protein complex, subunit beta 1##NM_016451|COPB1|1315|coatomer protein complex, subunit beta 1##NM_001144062|COPB1|1315|coatomer protein complex, subunit beta 1##NM_001144061|COPB1|1315|coatomer protein complex, subunit beta 1##BC022372|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##D00759|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1	0.339889	CTCF.p2:-2:0.340
chr15	72036385	72036519	reg1012351.p1	10.402	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	-196872	+	NM_024817 BC140868	-602642	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-628581	-	AF121129 NM_014249 NM_016346 AF148128	66460	+	AK097557 NM_001166340	370146	+	NM_001172109 NM_001172110	372766	+	AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172109|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172110|SENP8|123228|SUMO/sentrin specific peptidase family member 8	0.998389	CTCF.p2:-1:0.998
chr3	107872381	107872495	reg1008658.p1	10.402	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	-62565	-	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-630589	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-776128	+	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	68854	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	142963	+	BC035971 NM_007072	148893	+	BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2##BC035971|HHLA2|11148|HERV-H LTR-associating 2##NM_007072|HHLA2|11148|HERV-H LTR-associating 2	0.057839	
chr5	156362003	156362129	reg1010153.p2	10.402	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	-607893	+	BX537948 NM_000337 NM_001128209 NM_172244	-608306	+	NM_001099293 AK302388	-1968780	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	28169	-	BC013325 TSC_hg19_v1_chr5_-_156485247	123117	-	TSC_hg19_v1_chr5_-_156485459 NM_001099414 NM_012206	123399	-	BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC013325|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_001099414|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_012206|HAVCR1|26762|hepatitis A virus cellular receptor 1	0.016572	
chr1	181645552	181645663	reg1010593.p1	10.401	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-192907	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-587742	+	NM_016545	-587970	+	BC137223 BC137224 AK128654 NM_001009992	385190	-	TSC_hg19_v1_chr1_-_182354649 AK301600	709075	-	TSC_hg19_v1_chr1_-_182357758 BC127883	712156	-	NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase	0.763944	CTCF.p2:5:0.764
chr11	82617337	82617517	reg1010839.p1	10.400	+	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	-4653	+	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	-5910	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	-172529	-	AK312323 TSC_hg19_v1_chr11_-_82782872	165446	-	BC014213 NM_014488 TSC_hg19_v1_chr11_-_82782897 BX641138	165470	-	BC031316 TSC_hg19_v1_chr11_+_82783118	165691	+	NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AK312323|RAB30|27314|RAB30, member RAS oncogene family##BC014213|RAB30|27314|RAB30, member RAS oncogene family##NM_014488|RAB30|27314|RAB30, member RAS oncogene family##BX641138|RAB30|27314|RAB30, member RAS oncogene family##BC031316|LOC100506233|100506233|uncharacterized LOC100506233	0.997635	CTCF.p2:-19:0.998
chr2	10124450	10124596	reg1010145.p1	10.400	+	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	-32673	+	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	-140903	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-353398	-	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	59269	+	NM_001177718 AK302880 TSC_hg19_v1_chr2_+_10184414	59886	+	AB463821 TSC_hg19_v1_chr2_+_10186406	61822	+	NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11##NM_001177718|KLF11|8462|Kruppel-like factor 11##AK302880|KLF11|8462|Kruppel-like factor 11	0.029228	
chr1	45301640	45301763	reg1012521.p1	10.399	+	NM_001136537 TSC_hg19_v1_chr1_+_45274197 AK304611 AK056150	-27491	+	BC092499 DQ132441 NM_001013632	-28745	-	TSC_hg19_v1_chr1_+_45266048 AB209875 EU832631 EU832706 BC004135 BC004198 BC013960 U56998	-35569	+	AF087651 AF091501 AY358555 AB527344 AY359016 AF119569 NM_001166292 NM_003738 BC143712	6936	-	TSC_hg19_v1_chr1_-_45452256 BC021017 BC018728 AK022399 AF257077 BC014234 AL834288	150536	-	AK314668 TSC_hg19_v1_chr1_-_45452268 AK024006 NM_001166588 NM_020365	150612	-	NM_001136537|BTBD19|149478|BTB (POZ) domain containing 19##AK304611|BTBD19|149478|BTB (POZ) domain containing 19##AK056150|BTBD19|149478|BTB (POZ) domain containing 19##BC092499|TCTEX1D4|343521|Tctex1 domain containing 4##DQ132441|TCTEX1D4|343521|Tctex1 domain containing 4##NM_001013632|TCTEX1D4|343521|Tctex1 domain containing 4##AB209875|PLK3|1263|polo-like kinase 3##EU832631|PLK3|1263|polo-like kinase 3##EU832706|PLK3|1263|polo-like kinase 3##BC004135|PLK3|1263|polo-like kinase 3##BC004198|PLK3|1263|polo-like kinase 3##BC013960|PLK3|1263|polo-like kinase 3##U56998|PLK3|1263|polo-like kinase 3##AF087651|PTCH2|8643|patched 2##AF091501|PTCH2|8643|patched 2##AY358555|PTCH2|8643|patched 2##AY359016|PTCH2|8643|patched 2##AF119569|PTCH2|8643|patched 2##NM_001166292|PTCH2|8643|patched 2##NM_003738|PTCH2|8643|patched 2##BC143712|PTCH2|8643|patched 2##BC021017|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##BC018728|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AK022399|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AF257077|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##BC014234|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AL834288|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AK314668|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AK024006|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##NM_001166588|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##NM_020365|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa	0.817307	CTCF.p2:2:0.817
chr17	19045252	19045363	reg1009283.p1	10.399	+	BC157869 NM_001129778	-14526	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-95021	-	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-137228	-	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	95401	+	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	220662	-	TSC_hg19_v1_chr17_+_19281077 NM_139032 NM_139033 BC007404 BC007992 U29725 AK295376	235883	+	BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1##NM_139032|MAPK7|5598|mitogen-activated protein kinase 7##NM_139033|MAPK7|5598|mitogen-activated protein kinase 7##BC007404|MAPK7|5598|mitogen-activated protein kinase 7##BC007992|MAPK7|5598|mitogen-activated protein kinase 7##U29725|MAPK7|5598|mitogen-activated protein kinase 7##AK295376|MAPK7|5598|mitogen-activated protein kinase 7	0.964394	CTCF.p2:1:0.964
chrX	23336371	23336495	reg1009897.p2	10.399	+	AY039237 NM_182699 BC067878 BC051703	-318349	+	GQ355336 NM_152577 AK098601 BC074910 BC126190 BC126192 HQ258412 HQ258552	-1045365	+	NM_000444 U87284 AD000712 AK298030 BC105057 BC105059 U75645 U60475	-1285408	+	AK298796 NM_173495 AK054858 BC121061	16627	+	TSC_hg19_v1_chrX_+_23685615 BC016770	349190	+	TSC_hg19_v1_chrX_+_23685640 BC007107 NM_006406 U25182	349213	+	AY039237|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##NM_182699|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC067878|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC051703|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##GQ355336|ZNF645|158506|zinc finger protein 645##NM_152577|ZNF645|158506|zinc finger protein 645##AK098601|ZNF645|158506|zinc finger protein 645##BC074910|ZNF645|158506|zinc finger protein 645##BC126190|ZNF645|158506|zinc finger protein 645##BC126192|ZNF645|158506|zinc finger protein 645##HQ258412|ZNF645|158506|zinc finger protein 645##HQ258552|ZNF645|158506|zinc finger protein 645##NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AK298796|PTCHD1|139411|patched domain containing 1##NM_173495|PTCHD1|139411|patched domain containing 1##AK054858|PTCHD1|139411|patched domain containing 1##BC121061|PTCHD1|139411|patched domain containing 1##BC016770|PRDX4|10549|peroxiredoxin 4##BC007107|PRDX4|10549|peroxiredoxin 4##NM_006406|PRDX4|10549|peroxiredoxin 4##U25182|PRDX4|10549|peroxiredoxin 4	0.834804	CTCF.p2:-11:0.835
chr15	83104643	83104745	reg1010656.p2	10.398	+	NM_198181 CR936812	-5953	+	CR936602 NM_001164465	-86516	-	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-159804	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	104542	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	135841	-	CU690752 BC050629 NM_030594	211980	-	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	0.799612	CTCF.p2:-2:0.800
chr6	125435523	125435641	reg1011011.p1	10.398	+	AK093417 AX748113 BC026087 NM_152553	-131071	+	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	-1310378	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	-1477493	-	TSC_hg19_v1_chr6_+_125474909 NM_001003396 NM_001003397 NM_003287 AK291866 U44427 BC002375 AK291872 AF208012 AK291887	39357	+	AK124817 NM_001003395	39794	+	TSC_hg19_v1_chr6_-_125623123 AF529363 BC066332 BC061520 BC003357 AF151888	187523	-	AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217##NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##NM_001003396|TPD52L1|7164|tumor protein D52-like 1##NM_001003397|TPD52L1|7164|tumor protein D52-like 1##NM_003287|TPD52L1|7164|tumor protein D52-like 1##AK291866|TPD52L1|7164|tumor protein D52-like 1##U44427|TPD52L1|7164|tumor protein D52-like 1##BC002375|TPD52L1|7164|tumor protein D52-like 1##AK291872|TPD52L1|7164|tumor protein D52-like 1##AF208012|TPD52L1|7164|tumor protein D52-like 1##AK291887|TPD52L1|7164|tumor protein D52-like 1##AK124817|TPD52L1|7164|tumor protein D52-like 1##NM_001003395|TPD52L1|7164|tumor protein D52-like 1##AF529363|HDDC2|51020|HD domain containing 2##BC066332|HDDC2|51020|HD domain containing 2##BC061520|HDDC2|51020|HD domain containing 2##BC003357|HDDC2|51020|HD domain containing 2##AF151888|HDDC2|51020|HD domain containing 2	0.770004	CTCF.p2:11:0.770
chr7	97798041	97798171	reg1011865.p1	10.398	+	TSC_hg19_v1_chr7_+_97736173 AB029002 BC146773 NM_014916 BC131504 AB384558 AB590084 AY130988	-61770	+	TSC_hg19_v1_chr7_-_97619350 AB528806 NM_006188	-178724	-	TSC_hg19_v1_chr7_-_97601657 BC030024	-196446	-	BC113394 BC113396 NM_177455 AB464465	43485	+	TSC_hg19_v1_chr7_-_97881512 AK292996 BC053591 NM_015395 AK057048	83393	-	NM_001159491 NM_015379 TSC_hg19_v1_chr7_+_97910997 AB055977 BC018737 AF041430 BC062370 BC071992	112893	+	AB029002|LMTK2|22853|lemur tyrosine kinase 2##BC146773|LMTK2|22853|lemur tyrosine kinase 2##NM_014916|LMTK2|22853|lemur tyrosine kinase 2##BC131504|LMTK2|22853|lemur tyrosine kinase 2##AY130988|LMTK2|22853|lemur tyrosine kinase 2##NM_006188|OCM2|4951|oncomodulin 2##BC113394|BHLHA15|168620|basic helix-loop-helix family, member a15##BC113396|BHLHA15|168620|basic helix-loop-helix family, member a15##NM_177455|BHLHA15|168620|basic helix-loop-helix family, member a15##AK292996|TECPR1|25851|tectonin beta-propeller repeat containing 1##BC053591|TECPR1|25851|tectonin beta-propeller repeat containing 1##NM_015395|TECPR1|25851|tectonin beta-propeller repeat containing 1##AK057048|TECPR1|25851|tectonin beta-propeller repeat containing 1##NM_001159491|BRI3|25798|brain protein I3##NM_015379|BRI3|25798|brain protein I3##AB055977|BRI3|25798|brain protein I3##BC018737|BRI3|25798|brain protein I3##AF041430|BRI3|25798|brain protein I3##BC062370|BRI3|25798|brain protein I3	0.990975	CTCF.p2:9:0.991
chr11	123447814	123447934	reg1010125.p2	10.396	+	AB033027 TSC_hg19_v1_chr11_+_123431038	-16837	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	-16901	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	-51370	+	AJ243396 AB032984 TSC_hg19_v1_chr11_-_123525042	77087	-	TSC_hg19_v1_chr11_-_123525303 AK314513 AL136589 NM_001040151 NM_018400	77433	-	AK023751 TSC_hg19_v1_chr11_-_123612326 BC013382 NM_003455	164471	-	AB033027|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AK314513|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AL136589|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_001040151|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_018400|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AK023751|ZNF202|7753|zinc finger protein 202##BC013382|ZNF202|7753|zinc finger protein 202##NM_003455|ZNF202|7753|zinc finger protein 202	0.964451	CTCF.p2:10:0.964
chr15	48650474	48650620	reg1009969.p1	10.396	+	TSC_hg19_v1_chr15_+_48624363 AK291515 NM_001948 AK312122 U31930 U62891 L11877 AB049113 M89913 DQ891191 DQ894375 CR541720 CR541781	-26146	+	TSC_hg19_v1_chr15_+_48623625 NM_001025248 NM_001025249 AK000629 BC070339 BC110377 AK298464 U90223 AB528727	-26883	+	NM_000338 NM_001184832 AK129998 AK298312 BC020860	-152050	+	TSC_hg19_v1_chr15_-_48937070 L13923	286536	-	TSC_hg19_v1_chr15_-_48937907 BC146854 AK304737 BC094721 NM_000138 X63556	287382	-	BC117182 TSC_hg19_v1_chr15_-_49103277 AB020719 BC069186 AK303805 BX648822 BC107721 NM_001194998 NM_014985	452715	-	AK291515|DUT|1854|deoxyuridine triphosphatase##NM_001948|DUT|1854|deoxyuridine triphosphatase##AK312122|DUT|1854|deoxyuridine triphosphatase##U31930|DUT|1854|deoxyuridine triphosphatase##U62891|DUT|1854|deoxyuridine triphosphatase##L11877|DUT|1854|deoxyuridine triphosphatase##AB049113|DUT|1854|deoxyuridine triphosphatase##M89913|DUT|1854|deoxyuridine triphosphatase##DQ891191|DUT|1854|deoxyuridine triphosphatase##DQ894375|DUT|1854|deoxyuridine triphosphatase##CR541720|DUT|1854|deoxyuridine triphosphatase##CR541781|DUT|1854|deoxyuridine triphosphatase##NM_001025248|DUT|1854|deoxyuridine triphosphatase##NM_001025249|DUT|1854|deoxyuridine triphosphatase##AK000629|DUT|1854|deoxyuridine triphosphatase##BC070339|DUT|1854|deoxyuridine triphosphatase##BC110377|DUT|1854|deoxyuridine triphosphatase##AK298464|DUT|1854|deoxyuridine triphosphatase##U90223|DUT|1854|deoxyuridine triphosphatase##NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##L13923|FBN1|2200|fibrillin 1##BC146854|FBN1|2200|fibrillin 1##AK304737|FBN1|2200|fibrillin 1##BC094721|FBN1|2200|fibrillin 1##NM_000138|FBN1|2200|fibrillin 1##X63556|FBN1|2200|fibrillin 1##BC117182|CEP152|22995|centrosomal protein 152kDa##AB020719|CEP152|22995|centrosomal protein 152kDa##BC069186|CEP152|22995|centrosomal protein 152kDa##AK303805|CEP152|22995|centrosomal protein 152kDa##BX648822|CEP152|22995|centrosomal protein 152kDa##BC107721|CEP152|22995|centrosomal protein 152kDa##NM_001194998|CEP152|22995|centrosomal protein 152kDa##NM_014985|CEP152|22995|centrosomal protein 152kDa	0.79662	CTCF.p2:-27:0.575	CTCF.p2:-62:0.222
chr2	231712735	231712860	reg1011623.p1	10.396	+	AK292382 NM_001130849 NM_001130850 AK315692	-134519	+	TSC_hg19_v1_chr2_+_231577633 BC020570	-135153	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	-135251	+	TSC_hg19_v1_chr2_+_231729608 NM_001012514 NM_001012516 NM_030926	16763	+	TSC_hg19_v1_chr2_+_231729626 AF271781 AF272043	16832	+	TSC_hg19_v1_chr2_+_231729653 AK075361 AK090975 AK303199 AX746713	16848	+	AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##NM_016289|CAB39|51719|calcium binding protein 39##NM_001012514|ITM2C|81618|integral membrane protein 2C##NM_001012516|ITM2C|81618|integral membrane protein 2C##NM_030926|ITM2C|81618|integral membrane protein 2C##AF271781|ITM2C|81618|integral membrane protein 2C##AF272043|ITM2C|81618|integral membrane protein 2C##AK075361|ITM2C|81618|integral membrane protein 2C##AK090975|ITM2C|81618|integral membrane protein 2C##AK303199|ITM2C|81618|integral membrane protein 2C	1.194661	CTCF.p2:1:0.999
chr15	71117605	71117724	reg1010954.p2	10.395	+	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	-61822	-	BC016881 AL834243 NM_001008224 AK055435	-123037	-	TSC_hg19_v1_chr15_-_70878946 BC040579	-238720	-	CU675231 BC006082 BC009446 BC014018 AL833876 BC039153 TSC_hg19_v1_chr15_-_71146496 AK130092 AF443828 AF443829 AK002058 NM_018357 NM_197958	28804	-	CU693296 DQ890927 DQ894089 EU176528 AL360202 TSC_hg19_v1_chr15_-_71184737 BC027857 BC072414 AK313472 NM_020147	67027	-	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	67311	+	AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC006082|LARP6|55323|La ribonucleoprotein domain family, member 6##BC009446|LARP6|55323|La ribonucleoprotein domain family, member 6##BC014018|LARP6|55323|La ribonucleoprotein domain family, member 6##AL833876|LARP6|55323|La ribonucleoprotein domain family, member 6##BC039153|LARP6|55323|La ribonucleoprotein domain family, member 6##AK130092|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443828|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443829|LARP6|55323|La ribonucleoprotein domain family, member 6##AK002058|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_018357|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_197958|LARP6|55323|La ribonucleoprotein domain family, member 6##DQ890927|THAP10|56906|THAP domain containing 10##DQ894089|THAP10|56906|THAP domain containing 10##EU176528|THAP10|56906|THAP domain containing 10##AL360202|THAP10|56906|THAP domain containing 10##BC027857|THAP10|56906|THAP domain containing 10##BC072414|THAP10|56906|THAP domain containing 10##AK313472|THAP10|56906|THAP domain containing 10##NM_020147|THAP10|56906|THAP domain containing 10##BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49	0.998116	CTCF.p2:-11:0.998
chr16	88851956	88852090	reg1011263.p2	10.395	+	NM_001142864 AB384448 TSC_hg19_v1_chr16_-_88851456	-605	-	TSC_hg19_v1_chr16_+_88772910 BC121805 BC125269 NM_001012759 NM_001012762 BC157881 AK299521 BC108659 BC021056 BC063512 BC080540	-79100	+	TSC_hg19_v1_chr16_-_88772809 NM_178841	-79201	-	AB053172 NM_030928 TSC_hg19_v1_chr16_+_88870207	18174	+	TSC_hg19_v1_chr16_+_88870215 AF321125 BC000137 BC009410 BC008860 BC008676	18257	+	TSC_hg19_v1_chr16_-_88878337 BC107151 CR749423 NM_000485 NM_001030018	26312	-	NM_001142864|PIEZO1|9780|piezo-type mechanosensitive ion channel component 1##AB384448|PIEZO1|9780|piezo-type mechanosensitive ion channel component 1##BC121805|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC125269|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_001012759|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_001012762|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC157881|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##AK299521|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC108659|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC021056|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC063512|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC080540|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_178841|RNF166|115992|ring finger protein 166##AB053172|CDT1|81620|chromatin licensing and DNA replication factor 1##NM_030928|CDT1|81620|chromatin licensing and DNA replication factor 1##AF321125|CDT1|81620|chromatin licensing and DNA replication factor 1##BC000137|CDT1|81620|chromatin licensing and DNA replication factor 1##BC009410|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008860|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008676|CDT1|81620|chromatin licensing and DNA replication factor 1##BC107151|APRT|353|adenine phosphoribosyltransferase##CR749423|APRT|353|adenine phosphoribosyltransferase##NM_000485|APRT|353|adenine phosphoribosyltransferase##NM_001030018|APRT|353|adenine phosphoribosyltransferase	0.548206	CTCF.p2:15:0.548
chr2	223426670	223426770	reg1008858.p1	10.395	+	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	-137413	+	TSC_hg19_v1_chr2_+_223289261 AK314322	-137480	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	-263195	-	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	94074	-	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	109689	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	299027	+	AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AK314322|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3	0.682785	CTCF.p2:16:0.683
chr5	177318941	177319055	reg1009597.p1	10.395	+	AB018295 NM_173663	-111514	-	TSC_hg19_v1_chr5_-_177099217 AK297457	-219769	-	TSC_hg19_v1_chr5_+_177027143 BC007317 NM_007255 BC072403 AY358578 BC062983 AB028600 AK023506 AF142675 DQ893010 DQ896256 AB527637 AJ005382	-291844	+	AF076215 NM_006261	104244	-	TSC_hg19_v1_chr5_+_177482580 AB055766	163580	+	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	221630	+	AB018295|FAM153A|285596|family with sequence similarity 153, member A##NM_173663|FAM153A|285596|family with sequence similarity 153, member A##AK297457|LOC202181|202181|chromosome 5 open reading frame 25 pseudogene##BC007317|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##NM_007255|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC072403|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AY358578|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC062983|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AB028600|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AK023506|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF142675|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ893010|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ896256|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AJ005382|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF076215|PROP1|5626|PROP paired-like homeobox 1##NM_006261|PROP1|5626|PROP paired-like homeobox 1##AB055766|RPL19|6143|ribosomal protein L19##BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3	0.995842	CTCF.p2:0:0.996
chr7	143113781	143113899	reg1012009.p1	10.395	+	EU826604 EU826605 TSC_hg19_v1_chr7_-_143105950 AK290351 AK313263 BC130291 BC144156 M18391 NM_005232	-7900	-	AK130138 TSC_hg19_v1_chr7_+_143079969	-33893	+	TSC_hg19_v1_chr7_+_143079373 U15158	-34467	+	AB529260 BC100938 BC100939 BC100940 BC100941 NM_177437	26705	+	BC101157 BC101158 NM_176883	61125	+	BC043153 BC110410 NM_001008747 BC146818 BC150314	155051	+	EU826604|EPHA1|2041|EPH receptor A1##EU826605|EPHA1|2041|EPH receptor A1##AK290351|EPHA1|2041|EPH receptor A1##AK313263|EPHA1|2041|EPH receptor A1##BC130291|EPHA1|2041|EPH receptor A1##BC144156|EPHA1|2041|EPH receptor A1##M18391|EPHA1|2041|EPH receptor A1##NM_005232|EPHA1|2041|EPH receptor A1##AK130138|ZYX|7791|zyxin##U15158|ZYX|7791|zyxin##BC100938|TAS2R60|338398|taste receptor, type 2, member 60##BC100939|TAS2R60|338398|taste receptor, type 2, member 60##BC100940|TAS2R60|338398|taste receptor, type 2, member 60##BC100941|TAS2R60|338398|taste receptor, type 2, member 60##NM_177437|TAS2R60|338398|taste receptor, type 2, member 60##BC101157|TAS2R41|259287|taste receptor, type 2, member 41##BC101158|TAS2R41|259287|taste receptor, type 2, member 41##NM_176883|TAS2R41|259287|taste receptor, type 2, member 41##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_001008747|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC146818|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC150314|CTAGE15P|441294|CTAGE family, member 15, pseudogene	0.903425	CTCF.p2:9:0.903
chr7	14497593	14497705	reg1010143.p1	10.395	+	NM_001163148	-466600	-	NM_001163149 X87175	-466781	-	NM_001163147 NM_004956	-468008	-	BC105005 BC143632 BC143633 NM_004080 NM_145695	383365	-	BC108676 AK131284 NM_001004320	1103957	-	AB463880 CR536553 CU677801 L36328 TSC_hg19_v1_chr7_-_15726203 BC017021 AK313386	1228480	-	NM_001163148|ETV1|2115|ets variant 1##NM_001163149|ETV1|2115|ets variant 1##X87175|ETV1|2115|ets variant 1##NM_001163147|ETV1|2115|ets variant 1##NM_004956|ETV1|2115|ets variant 1##BC105005|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143632|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143633|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_004080|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_145695|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC108676|AGMO|392636|alkylglycerol monooxygenase##AK131284|AGMO|392636|alkylglycerol monooxygenase##NM_001004320|AGMO|392636|alkylglycerol monooxygenase##CR536553|MEOX2|4223|mesenchyme homeobox 2##L36328|MEOX2|4223|mesenchyme homeobox 2##BC017021|MEOX2|4223|mesenchyme homeobox 2##AK313386|MEOX2|4223|mesenchyme homeobox 2	0.999633	CTCF.p2:0:1.000
chrX	128741062	128741159	reg1008768.p1	10.395	+	TSC_hg19_v1_chrX_+_128674247 AK226116 BC094726 NM_000276 NM_001587 U57627 AK293107 BC130612 BC144106 BC025253 AB384825	-66812	+	TSC_hg19_v1_chrX_-_128657468 NM_003069 NM_139035	-83648	-	EU636009 TSC_hg19_v1_chrX_-_128657443	-83666	-	BC021104 NM_017413	47812	-	AK300954 U90724 NM_003399 BC126174 BC143901	131866	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	172777	+	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe##U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe##AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_003069|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_139035|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##EU636009|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC021104|APLN|8862|apelin##NM_017413|APLN|8862|apelin##AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3	0.984539	CTCF.p2:-1:0.985
chr19	6753399	6753572	reg1009216.p1	10.394	+	TSC_hg19_v1_chr19_+_6739712 NM_004240 AK313296 AB007845 AB072596 AK223109 AF502289 AJ000414 AY081141 BC013002 CU680464 DQ892747 DQ895993 AF380114 BT006698 BT020167 BT020171 CR536513	-13751	+	TSC_hg19_v1_chr19_-_6737615 BC146909 AX775899 NM_001080452	-15867	-	TSC_hg19_v1_chr19_-_6737592 AK291968	-15890	-	TSC_hg19_v1_chr19_-_6767447 AK225386 AK292781 AK299406 AK310659 BC006281 AF124249 AY358406 NM_005490 AK290293	14022	-	TSC_hg19_v1_chr19_+_6772718 NM_005428 AK225710 AK313307	19239	+	TSC_hg19_v1_chr19_+_6772811 AB590871	19323	+	NM_004240|TRIP10|9322|thyroid hormone receptor interactor 10##AK313296|TRIP10|9322|thyroid hormone receptor interactor 10##AB007845|TRIP10|9322|thyroid hormone receptor interactor 10##AB072596|TRIP10|9322|thyroid hormone receptor interactor 10##AK223109|TRIP10|9322|thyroid hormone receptor interactor 10##AF502289|TRIP10|9322|thyroid hormone receptor interactor 10##AJ000414|TRIP10|9322|thyroid hormone receptor interactor 10##AY081141|TRIP10|9322|thyroid hormone receptor interactor 10##BC013002|TRIP10|9322|thyroid hormone receptor interactor 10##DQ892747|TRIP10|9322|thyroid hormone receptor interactor 10##DQ895993|TRIP10|9322|thyroid hormone receptor interactor 10##AF380114|TRIP10|9322|thyroid hormone receptor interactor 10##BT006698|TRIP10|9322|thyroid hormone receptor interactor 10##BT020167|TRIP10|9322|thyroid hormone receptor interactor 10##BT020171|TRIP10|9322|thyroid hormone receptor interactor 10##CR536513|TRIP10|9322|thyroid hormone receptor interactor 10##BC146909|GPR108|56927|G protein-coupled receptor 108##AX775899|GPR108|56927|G protein-coupled receptor 108##NM_001080452|GPR108|56927|G protein-coupled receptor 108##AK291968|GPR108|56927|G protein-coupled receptor 108##AK225386|SH2D3A|10045|SH2 domain containing 3A##AK292781|SH2D3A|10045|SH2 domain containing 3A##AK299406|SH2D3A|10045|SH2 domain containing 3A##AK310659|SH2D3A|10045|SH2 domain containing 3A##BC006281|SH2D3A|10045|SH2 domain containing 3A##AF124249|SH2D3A|10045|SH2 domain containing 3A##AY358406|SH2D3A|10045|SH2 domain containing 3A##NM_005490|SH2D3A|10045|SH2 domain containing 3A##AK290293|SH2D3A|10045|SH2 domain containing 3A##NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor	0.851021	CTCF.p2:4:0.851
chr3	155100347	155100452	reg1009938.p1	10.393	+	NM_007289 TSC_hg19_v1_chr3_+_154798107 BC101632 BC143465 BC101658	-302266	+	TSC_hg19_v1_chr3_+_154797924 NM_007288	-302468	+	TSC_hg19_v1_chr3_+_154797847 Y00811	-302527	+	NM_001130960 NM_001130961 TSC_hg19_v1_chr3_-_155394133 AK096620	293755	-	BC113950 NM_014996	321597	-	BC042198 AF115515 TSC_hg19_v1_chr3_-_155524068 BC064898 AK055701 NM_173657 AL832165 AK289890	423662	-	NM_007289|MME|4311|membrane metallo-endopeptidase##BC101632|MME|4311|membrane metallo-endopeptidase##BC143465|MME|4311|membrane metallo-endopeptidase##BC101658|MME|4311|membrane metallo-endopeptidase##NM_007288|MME|4311|membrane metallo-endopeptidase##Y00811|MME|4311|membrane metallo-endopeptidase##NM_001130960|PLCH1|23007|phospholipase C, eta 1##NM_001130961|PLCH1|23007|phospholipase C, eta 1##AK096620|PLCH1|23007|phospholipase C, eta 1##BC113950|PLCH1|23007|phospholipase C, eta 1##NM_014996|PLCH1|23007|phospholipase C, eta 1##BC042198|C3orf33|285315|chromosome 3 open reading frame 33##AF115515|C3orf33|285315|chromosome 3 open reading frame 33##BC064898|C3orf33|285315|chromosome 3 open reading frame 33##AK055701|C3orf33|285315|chromosome 3 open reading frame 33##NM_173657|C3orf33|285315|chromosome 3 open reading frame 33##AL832165|C3orf33|285315|chromosome 3 open reading frame 33##AK289890|C3orf33|285315|chromosome 3 open reading frame 33	0.354651	CTCF.p2:-14:0.355
chrX	73563980	73564109	reg1012785.p1	10.393	+	BC021176 NM_203303 TSC_hg19_v1_chrX_+_73524041 EU446947 EU831786 EU831864 CU676854	-39982	+	TSC_hg19_v1_chrX_-_73513379 AK311345	-50670	-	TSC_hg19_v1_chrX_-_73512419 AK057701	-51639	-	NM_006517 TSC_hg19_v1_chrX_+_73641331 U05315 AB085789	77202	+	AF155109 TSC_hg19_v1_chrX_-_73834424 BC013357	270373	-	BC002451 TSC_hg19_v1_chrX_-_73834428	270384	-	BC021176|ZCCHC13|389874|zinc finger, CCHC domain containing 13##NM_203303|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU446947|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831786|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831864|ZCCHC13|389874|zinc finger, CCHC domain containing 13##AK311345|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##AK057701|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##NM_006517|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##U05315|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##AB085789|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##AF155109|RLIM|51132|ring finger protein, LIM domain interacting##BC013357|RLIM|51132|ring finger protein, LIM domain interacting	0.999199	CTCF.p2:-1:0.999
chr10	120959061	120959187	reg1008090.p1	10.391	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-20777	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-20821	-	CU687762 AY269785 TSC_hg19_v1_chr10_-_120925213 AK095295 BC063562 BC050475 NM_213649	-33937	-	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	8137	+	NM_002925	336920	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	343066	-	BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##AY269785|SFXN4|119559|sideroflexin 4##AK095295|SFXN4|119559|sideroflexin 4##BC063562|SFXN4|119559|sideroflexin 4##BC050475|SFXN4|119559|sideroflexin 4##NM_213649|SFXN4|119559|sideroflexin 4##BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10	0.0	
chr1	15354106	15354243	reg1011137.p1	10.391	+	AY505122 NM_001017999	-81760	+	AY505121 NM_001018001	-97879	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	-103455	+	AK292184 NM_001136216 NM_001136217 TSC_hg19_v1_chr1_+_15479047	124857	+	AK129922 TSC_hg19_v1_chr1_+_15479310	125130	+	TSC_hg19_v1_chr1_+_15480249 AK001061 NM_001136218 NM_018022 BC000593 BC005177 AK098467	126074	+	AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AK292184|TMEM51|55092|transmembrane protein 51##NM_001136216|TMEM51|55092|transmembrane protein 51##NM_001136217|TMEM51|55092|transmembrane protein 51##AK129922|TMEM51|55092|transmembrane protein 51##AK001061|TMEM51|55092|transmembrane protein 51##NM_001136218|TMEM51|55092|transmembrane protein 51##NM_018022|TMEM51|55092|transmembrane protein 51##BC000593|TMEM51|55092|transmembrane protein 51##BC005177|TMEM51|55092|transmembrane protein 51##AK098467|TMEM51|55092|transmembrane protein 51	0.944471	CTCF.p2:4:0.944
chr11	71300353	71300487	reg1011380.p1	10.391	+	BC130498 BC130502 AB126080 NM_001005405	-6506	-	AB126079 BC137550 BC137566 NM_001012710	-23812	+	NM_005553 X63755 BC101744 AB126078 CU686892 BC069531	-40836	+	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	198187	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	224486	-	AF529416 NM_001002035	243825	+	BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11##AB126079|KRTAP5-10|387273|keratin associated protein 5-10##BC137550|KRTAP5-10|387273|keratin associated protein 5-10##BC137566|KRTAP5-10|387273|keratin associated protein 5-10##NM_001012710|KRTAP5-10|387273|keratin associated protein 5-10##NM_005553|KRTAP5-9|3846|keratin associated protein 5-9##X63755|KRTAP5-9|3846|keratin associated protein 5-9##BC101744|KRTAP5-9|3846|keratin associated protein 5-9##AB126078|KRTAP5-9|3846|keratin associated protein 5-9##BC069531|KRTAP5-9|3846|keratin associated protein 5-9##NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1##BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene##AF529416|DEFB108B|245911|defensin, beta 108B##NM_001002035|DEFB108B|245911|defensin, beta 108B	1.749347	CTCF.p2:35:0.892	CTCF.p2:-67:0.858
chr14	22782751	22782885	reg1010779.p1	10.391	+	AB463964 NM_001001912 AY726598	-649496	+	NM_001005466 AB529274 BC137371 BC137382	-679772	-	AB528817 NM_001005465	-743944	-	X58763 TSC_hg19_v1_chr14_+_22989364	206531	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	275268	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	275316	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.986055	CTCF.p2:-2:0.898
chr20	459721	459850	reg1012192.p1	10.390	+	TSC_hg19_v1_chr20_-_443178 AK095110 NM_144628 AK127062	-16570	-	TSC_hg19_v1_chr20_-_443161 BC014983 AK291648	-16635	-	AB449906 TSC_hg19_v1_chr20_-_443136	-16693	-	TSC_hg19_v1_chr20_-_524377 DQ354583 BC011668 M55265 BC002615 J02853 S53149 BC050036 AK302583 AK312535 AY735339 NM_001895 NM_177559 NM_177560	64623	-	NM_004609 U08336 TSC_hg19_v1_chr20_-_590953 BC067836	131153	-	BC017001 TSC_hg19_v1_chr20_-_633843 AM393140 AM393844 BC047707 BC032604 AK312054	174040	-	AK095110|TBC1D20|128637|TBC1 domain family, member 20##NM_144628|TBC1D20|128637|TBC1 domain family, member 20##AK127062|TBC1D20|128637|TBC1 domain family, member 20##BC014983|TBC1D20|128637|TBC1 domain family, member 20##AK291648|TBC1D20|128637|TBC1 domain family, member 20##AB449906|TBC1D20|128637|TBC1 domain family, member 20##DQ354583|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##BC011668|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##M55265|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##BC002615|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##J02853|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##S53149|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##BC050036|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AK302583|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AK312535|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AY735339|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_001895|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_177559|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_177560|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_004609|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##U08336|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##BC067836|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##BC017001|SRXN1|140809|sulfiredoxin 1##AM393140|SRXN1|140809|sulfiredoxin 1##AM393844|SRXN1|140809|sulfiredoxin 1##BC047707|SRXN1|140809|sulfiredoxin 1##BC032604|SRXN1|140809|sulfiredoxin 1##AK312054|SRXN1|140809|sulfiredoxin 1	0.99973	CTCF.p2:7:1.000
chr1	101904042	101904168	reg1008993.p1	10.389	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-201535	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-201724	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-412672	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	558382	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	558685	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1592678	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.017273	
chr4	5814794	5814902	reg1010163.p1	10.389	+	TSC_hg19_v1_chr4_+_5712929 AF216184 AF216185 NM_153717 BC085608 AF239742	-101851	+	AY152402 AY152403 NM_001166136	-103574	-	AY185210 NM_147127 TSC_hg19_v1_chr4_-_5710299	-104548	-	AK091696 TSC_hg19_v1_chr4_-_5828628	13760	-	BT006806 CU674102 DQ892528 DQ895740 TSC_hg19_v1_chr4_-_5889997	75148	-	D78012 TSC_hg19_v1_chr4_-_5890210 AK127754 BC000252 BC007613 AK309379	75341	-	AF216184|EVC|2121|Ellis van Creveld syndrome##AF216185|EVC|2121|Ellis van Creveld syndrome##NM_153717|EVC|2121|Ellis van Creveld syndrome##BC085608|EVC|2121|Ellis van Creveld syndrome##AF239742|EVC|2121|Ellis van Creveld syndrome##AY152402|EVC2|132884|Ellis van Creveld syndrome 2##AY152403|EVC2|132884|Ellis van Creveld syndrome 2##NM_001166136|EVC2|132884|Ellis van Creveld syndrome 2##AY185210|EVC2|132884|Ellis van Creveld syndrome 2##NM_147127|EVC2|132884|Ellis van Creveld syndrome 2##AK091696|CRMP1|1400|collapsin response mediator protein 1##BT006806|CRMP1|1400|collapsin response mediator protein 1##DQ892528|CRMP1|1400|collapsin response mediator protein 1##DQ895740|CRMP1|1400|collapsin response mediator protein 1##D78012|CRMP1|1400|collapsin response mediator protein 1##AK127754|CRMP1|1400|collapsin response mediator protein 1##BC000252|CRMP1|1400|collapsin response mediator protein 1##BC007613|CRMP1|1400|collapsin response mediator protein 1##AK309379|CRMP1|1400|collapsin response mediator protein 1	0.896683	CTCF.p2:18:0.897
chr7	149580625	149580758	reg1012696.p1	10.389	+	TSC_hg19_v1_chr7_+_149571066 BX640846 AK290086 AK094602 AK098362 AK172725 DQ995344 AY037164	-9610	+	BC023225 TSC_hg19_v1_chr7_-_149570892 BC028735	-9796	-	TSC_hg19_v1_chr7_+_149570049 AF452639 AK057700 NM_001100592 NM_145230	-10649	+	AB039791 NM_001164459	419377	-	TSC_hg19_v1_chr7_+_150020443 NM_001142928 NM_023942 AK055954	439713	+	TSC_hg19_v1_chr7_+_150020552 BC001354	439885	+	BX640846|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK290086|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK094602|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK098362|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK172725|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##DQ995344|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AY037164|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##BC023225|LOC401431|401431|uncharacterized LOC401431##BC028735|LOC401431|401431|uncharacterized LOC401431##AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AB039791|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)##NM_001164459|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)##NM_001142928|LRRC61|65999|leucine rich repeat containing 61##NM_023942|LRRC61|65999|leucine rich repeat containing 61##AK055954|LRRC61|65999|leucine rich repeat containing 61##BC001354|LRRC61|65999|leucine rich repeat containing 61	0.995486	CTCF.p2:-12:0.995
chr5	134761903	134762033	reg1010722.p1	10.388	+	TSC_hg19_v1_chr5_-_134735578 BC013331 AF054174 NM_004893	-26395	-	TSC_hg19_v1_chr5_-_134734920 AK023409 AK296014 NM_001040158 NM_138609 NM_138610	-27047	-	TSC_hg19_v1_chr5_-_134734891 BC095406	-27080	-	CU686932 BC074831 BC074832 BC069608 BC069610 BC117156 BC117158 AB074498 NM_130848	20949	-	AK131088 AB161513 NM_001099221	26069	-	BC008687 BC028226 NM_006161 TSC_hg19_v1_chr5_-_134871655 AB593107 AK314280	109678	-	BC013331|H2AFY|9555|H2A histone family, member Y##AF054174|H2AFY|9555|H2A histone family, member Y##NM_004893|H2AFY|9555|H2A histone family, member Y##AK023409|H2AFY|9555|H2A histone family, member Y##AK296014|H2AFY|9555|H2A histone family, member Y##NM_001040158|H2AFY|9555|H2A histone family, member Y##NM_138609|H2AFY|9555|H2A histone family, member Y##NM_138610|H2AFY|9555|H2A histone family, member Y##BC095406|H2AFY|9555|H2A histone family, member Y##BC074831|C5orf20|140947|chromosome 5 open reading frame 20##BC074832|C5orf20|140947|chromosome 5 open reading frame 20##BC069608|C5orf20|140947|chromosome 5 open reading frame 20##BC069610|C5orf20|140947|chromosome 5 open reading frame 20##BC117156|C5orf20|140947|chromosome 5 open reading frame 20##BC117158|C5orf20|140947|chromosome 5 open reading frame 20##AB074498|C5orf20|140947|chromosome 5 open reading frame 20##NM_130848|C5orf20|140947|chromosome 5 open reading frame 20##AB161513|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##NM_001099221|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##BC008687|NEUROG1|4762|neurogenin 1##BC028226|NEUROG1|4762|neurogenin 1##NM_006161|NEUROG1|4762|neurogenin 1##AB593107|NEUROG1|4762|neurogenin 1	0.996589	CTCF.p2:8:0.997
chr19	4400630	4400729	reg1007019.p1	10.387	+	BC001270 TSC_hg19_v1_chr19_-_4400513 AK315450 BC098565 AK299166 NM_001199943 NM_003025	-126	-	TSC_hg19_v1_chr19_-_4400419 AY364240 CR542087 AB527297 DQ891258 DQ894444 U65999 X99656 AK097616 NM_001199944	-286	-	NM_001159846 NM_032868 AK027887 AK308468 TSC_hg19_v1_chr19_+_4343562 BC032652	-57120	+	BC067093 NM_005483 BC052620 TSC_hg19_v1_chr19_+_4402664 BC041606 AB527824 U20979 BC005813 BC011560	2037	+	AF272894 BC008288 NM_001171091	54610	-	AF272893 NM_025241	57110	-	BC001270|SH3GL1|6455|SH3-domain GRB2-like 1##AK315450|SH3GL1|6455|SH3-domain GRB2-like 1##BC098565|SH3GL1|6455|SH3-domain GRB2-like 1##AK299166|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199943|SH3GL1|6455|SH3-domain GRB2-like 1##NM_003025|SH3GL1|6455|SH3-domain GRB2-like 1##AY364240|SH3GL1|6455|SH3-domain GRB2-like 1##CR542087|SH3GL1|6455|SH3-domain GRB2-like 1##DQ891258|SH3GL1|6455|SH3-domain GRB2-like 1##DQ894444|SH3GL1|6455|SH3-domain GRB2-like 1##U65999|SH3GL1|6455|SH3-domain GRB2-like 1##X99656|SH3GL1|6455|SH3-domain GRB2-like 1##AK097616|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199944|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001159846|MPND|84954|MPN domain containing##NM_032868|MPND|84954|MPN domain containing##AK027887|MPND|84954|MPN domain containing##AK308468|MPND|84954|MPN domain containing##BC032652|MPND|84954|MPN domain containing##BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##AF272894|UBXN6|80700|UBX domain protein 6##BC008288|UBXN6|80700|UBX domain protein 6##NM_001171091|UBXN6|80700|UBX domain protein 6##AF272893|UBXN6|80700|UBX domain protein 6##NM_025241|UBXN6|80700|UBX domain protein 6	1.759287	CTCF.p2:-43:0.952
chr5	58187679	58187817	reg1010879.p2	10.387	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	-308829	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	-400454	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	-431812	-	BC036319 NM_001197223	108010	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	147630	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	384182	-	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.995199	CTCF.p2:-3:0.995
chr7	151480107	151480244	reg1007687.p2	10.387	+	TSC_hg19_v1_chr7_-_151329284 BT007127 BC020540 AB025580 AF087875 AK314646 AK001887 NM_024429	-150895	-	TSC_hg19_v1_chr7_-_151216982 BC107705 AK125446 BC016155 NM_005614	-263190	-	TSC_hg19_v1_chr7_-_151216769 BC066307	-263406	-	BC068598 TSC_hg19_v1_chr7_-_151511929 NM_001040633	31765	-	AK074675 NM_016203	94087	-	NM_145292 AF440404 AK315667 AK093091 AX747915 BC022021 AF440400 BC025391	173323	+	BT007127|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC020540|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AB025580|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AF087875|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK314646|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK001887|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_024429|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC107705|RHEB|6009|Ras homolog enriched in brain##AK125446|RHEB|6009|Ras homolog enriched in brain##BC016155|RHEB|6009|Ras homolog enriched in brain##NM_005614|RHEB|6009|Ras homolog enriched in brain##BC066307|RHEB|6009|Ras homolog enriched in brain##BC068598|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_001040633|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK074675|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_016203|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_145292|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440404|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK315667|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK093091|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC022021|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440400|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC025391|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	0.999191	CTCF.p2:12:0.999
chr10	24931967	24932104	reg1009388.p1	10.386	+	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	-176566	+	TSC_hg19_v1_chr10_+_24755441 AK300422	-176591	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	-433941	+	AK307604 TSC_hg19_v1_chr10_-_25012174	80138	-	AF480466 NM_020824 TSC_hg19_v1_chr10_-_25012632	80571	-	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	309497	-	BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217##AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21##AF480466|ARHGAP21|57584|Rho GTPase activating protein 21##NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21##AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	0.584088	CTCF.p2:-29:0.584
chr7	120627789	120627900	reg1010479.p1	10.386	+	AK000096 NM_019071 NM_198267 TSC_hg19_v1_chr7_+_120590832 AF161419 BC009777 BC093091 AY007790 AK291905 AF074968 BC073865 AF180298 BC062634 BC093689 BC101609 BC143316 BC009776 BC010851 BC146417 BC153171 AB463778	-36963	+	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	-129684	-	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	-129824	-	TSC_hg19_v1_chr7_+_120628742 NM_024913 AK289978 AL832619	921	+	TSC_hg19_v1_chr7_+_120628867 AL832638	1052	+	NM_001105533	1600	+	AK000096|ING3|54556|inhibitor of growth family, member 3##NM_019071|ING3|54556|inhibitor of growth family, member 3##NM_198267|ING3|54556|inhibitor of growth family, member 3##AF161419|ING3|54556|inhibitor of growth family, member 3##BC009777|ING3|54556|inhibitor of growth family, member 3##BC093091|ING3|54556|inhibitor of growth family, member 3##AY007790|ING3|54556|inhibitor of growth family, member 3##AK291905|ING3|54556|inhibitor of growth family, member 3##AF074968|ING3|54556|inhibitor of growth family, member 3##BC073865|ING3|54556|inhibitor of growth family, member 3##AF180298|ING3|54556|inhibitor of growth family, member 3##BC062634|ING3|54556|inhibitor of growth family, member 3##BC093689|ING3|54556|inhibitor of growth family, member 3##BC101609|ING3|54556|inhibitor of growth family, member 3##BC143316|ING3|54556|inhibitor of growth family, member 3##BC009776|ING3|54556|inhibitor of growth family, member 3##BC010851|ING3|54556|inhibitor of growth family, member 3##BC146417|ING3|54556|inhibitor of growth family, member 3##BC153171|ING3|54556|inhibitor of growth family, member 3##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##NM_024913|C7orf58|79974|chromosome 7 open reading frame 58##AK289978|C7orf58|79974|chromosome 7 open reading frame 58##AL832619|C7orf58|79974|chromosome 7 open reading frame 58##AL832638|C7orf58|79974|chromosome 7 open reading frame 58##NM_001105533|C7orf58|79974|chromosome 7 open reading frame 58	0.512168	CTCF.p2:-10:0.512
chr18	3585939	3586073	reg1010352.p1	10.385	+	NM_173211	-132235	+	TSC_hg19_v1_chr18_+_3451599 NM_170695 NM_173210 AK307230 BC031268	-134375	+	NM_173209 NM_173208 TSC_hg19_v1_chr18_+_3450174 NM_003244 AK309471 X89750	-135926	+	TSC_hg19_v1_chr18_+_3594077 AK093095 AX747919 BC137437	8136	+	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	259324	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	288278	-	NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1##NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1##BC031268|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1##NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1##AK309471|TGIF1|7050|TGFB-induced factor homeobox 1##X89750|TGIF1|7050|TGFB-induced factor homeobox 1##AK093095|FLJ35776|649446|uncharacterized LOC649446##BC137437|FLJ35776|649446|uncharacterized LOC649446##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	0.990168	CTCF.p2:2:0.990
chr3	149230213	149230349	reg1011201.p2	10.385	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-37792	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-37879	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-134739	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	145454	-	AK022036 NM_001168278	190778	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	239958	-	AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2	0.940654	CTCF.p2:-11:0.941
chr11	11820505	11820625	reg1012355.p1	10.383	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	-176987	-	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-940779	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-941047	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	42451	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	42926	+	TSC_hg19_v1_chr11_+_11863521 BC071559 AK027362 AK092290 AX747455	43003	+	AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47##BC071559|USP47|55031|ubiquitin specific peptidase 47##AK027362|USP47|55031|ubiquitin specific peptidase 47##AK092290|USP47|55031|ubiquitin specific peptidase 47	0.986497	CTCF.p2:-8:0.986
chr1	67680194	67680318	reg1010694.p1	10.383	+	AF461422 NM_144701	-48088	+	NM_001013674	-86037	-	TSC_hg19_v1_chr1_-_67520070 AK289800 NM_015139	-160203	-	NM_001559 U64198 TSC_hg19_v1_chr1_+_67773087	92825	+	AK294494 TSC_hg19_v1_chr1_+_67773565 AK316525	93307	+	CR457383 AB527591 CU675982 CU676556 CU677990 CU693242 EU831446 EU831638 EU831722 EU832650 EU832728 TSC_hg19_v1_chr1_-_67896065 BC003049 AK130606 BC002488 BC008045 BC017449 BC020555 BC026916 BC019273 AL080119 AF151813	215767	-	AF461422|IL23R|149233|interleukin 23 receptor##NM_144701|IL23R|149233|interleukin 23 receptor##NM_001013674|C1orf141|400757|chromosome 1 open reading frame 141##AK289800|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_015139|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_001559|IL12RB2|3595|interleukin 12 receptor, beta 2##U64198|IL12RB2|3595|interleukin 12 receptor, beta 2##AK294494|IL12RB2|3595|interleukin 12 receptor, beta 2##AK316525|IL12RB2|3595|interleukin 12 receptor, beta 2##CR457383|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831446|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831638|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831722|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832650|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832728|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC003049|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK130606|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC002488|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC008045|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC017449|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC020555|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC026916|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC019273|SERBP1|26135|SERPINE1 mRNA binding protein 1##AL080119|SERBP1|26135|SERPINE1 mRNA binding protein 1##AF151813|SERBP1|26135|SERPINE1 mRNA binding protein 1	0.917959	CTCF.p2:-2:0.918
chr19	38389443	38389576	reg1010955.p1	10.383	+	TSC_hg19_v1_chr19_+_38308124 AK092337	-81370	+	TSC_hg19_v1_chr19_+_38307973 AK309685	-81500	+	BC064962 AK074539 NM_001172689 NM_001172690 NM_001172691 NM_001172692 NM_152360	-119295	-	AK302913 AY026504 AK128826 NM_031951	7765	-	TSC_hg19_v1_chr19_+_38397847 NM_015073	8348	+	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	8403	+	AK092337|LOC644554|644554|uncharacterized LOC644554##AK309685|LOC644554|644554|uncharacterized LOC644554##BC064962|ZNF573|126231|zinc finger protein 573##AK074539|ZNF573|126231|zinc finger protein 573##NM_001172689|ZNF573|126231|zinc finger protein 573##NM_001172690|ZNF573|126231|zinc finger protein 573##NM_001172691|ZNF573|126231|zinc finger protein 573##NM_001172692|ZNF573|126231|zinc finger protein 573##NM_152360|ZNF573|126231|zinc finger protein 573##AK302913|WDR87|83889|WD repeat domain 87##AY026504|WDR87|83889|WD repeat domain 87##AK128826|WDR87|83889|WD repeat domain 87##NM_031951|WDR87|83889|WD repeat domain 87##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	0.999213	CTCF.p2:-9:0.999
chr5	114922340	114922485	reg1010529.p2	10.383	+	TSC_hg19_v1_chr5_-_114880540 BC028369 NM_020177	-41849	-	TSC_hg19_v1_chr5_-_114880370 AL365415 AK315803 BC098385	-42055	-	AB587510 AJ580807 NM_001040440	-290064	-	BC109265 BC109266 NM_021649	15705	-	TSC_hg19_v1_chr5_-_114961697 AK074962	39280	-	TSC_hg19_v1_chr5_-_114961708 AY304583 AY304584 BC019349 AK075218 AK304210 AK027512 NM_001164468 NM_001164469 NM_181836	39382	-	BC028369|FEM1C|56929|fem-1 homolog c (C. elegans)##NM_020177|FEM1C|56929|fem-1 homolog c (C. elegans)##AL365415|FEM1C|56929|fem-1 homolog c (C. elegans)##AK315803|FEM1C|56929|fem-1 homolog c (C. elegans)##BC098385|FEM1C|56929|fem-1 homolog c (C. elegans)##AJ580807|CCDC112|153733|coiled-coil domain containing 112##NM_001040440|CCDC112|153733|coiled-coil domain containing 112##BC109265|TICAM2|353376|toll-like receptor adaptor molecule 2##BC109266|TICAM2|353376|toll-like receptor adaptor molecule 2##NM_021649|TICAM2|353376|toll-like receptor adaptor molecule 2##AK074962|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AY304583|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AY304584|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##BC019349|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK075218|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AK304210|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK027512|TMED7|51014|transmembrane emp24 protein transport domain containing 7##NM_001164468|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_001164469|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_181836|TMED7|51014|transmembrane emp24 protein transport domain containing 7	0.991548	CTCF.p2:3:0.992
chr7	55322637	55322789	reg1003987.p1	10.383	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-235767	+	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	-235968	+	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	-495792	-	AK095857 NM_018697	110427	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	110859	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	317327	-	AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor##AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	0.9986	CTCF.p2:-1:0.999
chr15	72605083	72605190	reg1010861.p1	10.382	+	AK294382 NM_001172685	-6481	-	NM_020214	-41509	-	TSC_hg19_v1_chr15_-_72523728 NM_001206796 NM_001206797 NM_001206798 NM_002654 NM_182470 NM_182471	-81408	-	AK124858 TSC_hg19_v1_chr15_-_72612227 AK296004 BC030835	7041	-	TSC_hg19_v1_chr15_-_72612248 AF425606 AK308073 NM_001172684	7130	-	AF401233 TSC_hg19_v1_chr15_-_72612478	7338	-	AK294382|CELF6|60677|CUGBP, Elav-like family member 6##NM_001172685|CELF6|60677|CUGBP, Elav-like family member 6##NM_020214|PARP6|56965|poly (ADP-ribose) polymerase family, member 6##NM_001206796|PKM2|5315|pyruvate kinase, muscle##NM_001206797|PKM2|5315|pyruvate kinase, muscle##NM_001206798|PKM2|5315|pyruvate kinase, muscle##NM_002654|PKM2|5315|pyruvate kinase, muscle##NM_182470|PKM2|5315|pyruvate kinase, muscle##NM_182471|PKM2|5315|pyruvate kinase, muscle##AK124858|CELF6|60677|CUGBP, Elav-like family member 6##AK296004|CELF6|60677|CUGBP, Elav-like family member 6##BC030835|CELF6|60677|CUGBP, Elav-like family member 6##AF425606|CELF6|60677|CUGBP, Elav-like family member 6##NM_001172684|CELF6|60677|CUGBP, Elav-like family member 6##AF401233|CELF6|60677|CUGBP, Elav-like family member 6	0.990595	CTCF.p2:-7:0.991
chr1	110041060	110041171	reg1011794.p1	10.381	+	NM_001134402 AK126707 NM_001134400 NM_001134403 NM_001134404 NM_182580 TSC_hg19_v1_chr1_+_110036712 AK299086 BX647509 AK096354 AK303546 BC093683 BC111999 BC143308 AK294992 AK128798	-4419	+	TSC_hg19_v1_chr1_+_110026580 BC036849 NM_153340	-14569	+	TSC_hg19_v1_chr1_+_110009222 AK293082	-31894	+	TSC_hg19_v1_chr1_-_110052350 BC040879 AK295678 NM_020703	11219	-	AK290027 NM_031936 AF258342	41385	+	NM_006496 TSC_hg19_v1_chr1_+_110091203	50085	+	NM_001134402|CYB561D1|284613|cytochrome b-561 domain containing 1##AK126707|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134400|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134403|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134404|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_182580|CYB561D1|284613|cytochrome b-561 domain containing 1##AK299086|CYB561D1|284613|cytochrome b-561 domain containing 1##BX647509|CYB561D1|284613|cytochrome b-561 domain containing 1##AK096354|CYB561D1|284613|cytochrome b-561 domain containing 1##AK303546|CYB561D1|284613|cytochrome b-561 domain containing 1##BC093683|CYB561D1|284613|cytochrome b-561 domain containing 1##BC111999|CYB561D1|284613|cytochrome b-561 domain containing 1##BC143308|CYB561D1|284613|cytochrome b-561 domain containing 1##AK294992|CYB561D1|284613|cytochrome b-561 domain containing 1##AK128798|CYB561D1|284613|cytochrome b-561 domain containing 1##BC036849|ATXN7L2|127002|ataxin 7-like 2##NM_153340|ATXN7L2|127002|ataxin 7-like 2##AK293082|SYPL2|284612|synaptophysin-like 2##BC040879|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK295678|AMIGO1|57463|adhesion molecule with Ig-like domain 1##NM_020703|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK290027|GPR61|83873|G protein-coupled receptor 61##NM_031936|GPR61|83873|G protein-coupled receptor 61##AF258342|GPR61|83873|G protein-coupled receptor 61##NM_006496|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3	0.05833	
chr1	199082501	199082648	reg1012657.p1	10.381	+	TSC_hg19_v1_chr1_-_198906559 EF413001	-176027	-	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-474244	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-474349	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	914295	+	AK316513 TSC_hg19_v1_chr1_+_200011716	929150	+	NM_001105517	1100081	+	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene	1.012891	CTCF.p2:12:0.987
chr15	80860135	80860277	reg1012145.p1	10.381	+	AK295763 TSC_hg19_v1_chr15_+_80733623	-126601	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	-163472	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-414830	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	127456	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	127803	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	211515	+	AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199	0.989622	CTCF.p2:-15:0.952
chr6	130073106	130073247	reg1011610.p1	10.381	+	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	-41850	-	NM_000426 NM_001079823 Z26653	-868863	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-1231520	-	NM_001010876	109239	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	266549	+	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	463279	-	BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3	0.648558	CTCF.p2:1:0.649
chr3	5347198	5347334	reg1009880.p1	10.380	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-117775	+	TSC_hg19_v1_chr3_+_5229430 D86967	-117833	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	-117903	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	1555533	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	1555632	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	3196064	-	DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK124088|LOC100288428|100288428|uncharacterized LOC100288428	0.82054	CTCF.p2:-7:0.821
chr9	4604692	4604836	reg1012917.p1	10.380	+	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	-114327	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-304733	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-304801	-	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	57547	+	AK295831 NM_001039395	61905	-	TSC_hg19_v1_chr9_+_4679596 AK000497 NM_017913 AK000646 AK225510 BC014133 CU680796	74897	+	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68##AK000497|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##NM_017913|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK000646|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK225510|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##BC014133|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1	0.0	
chr1	145293419	145293534	reg1010961.p1	10.379	+	AY894562 AY894570 NM_001039703	-175	+	TSC_hg19_v1_chr1_+_145209107 NM_203458 BC010154 AK075065 BC090943 BC019835 AK092351 AK098372 AX747492 BC065219 AK293876 BC084572	-84355	+	TSC_hg19_v1_chr1_+_145096519 CU674670 DQ892584 DQ895801	-196944	+	NM_145277 NM_202004 NM_213652 NM_213653 AK223575 AK092682 AK315852 AX747669 BC017926 AK096905 AK290831 AK292742 AK092692 AK124273 AX747673 BC085604	119787	+	TSC_hg19_v1_chr1_+_145438489 NM_006472 AK301203 BX537824 AK226090 S73591 BC093702 BC093704 AB527234 AY594328 BC024305 AK301148	145200	+	TSC_hg19_v1_chr1_-_145470375 AK092209 AK056984 BC004355 NM_032305 BC050418	176912	-	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8##NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10##NM_203458|NOTCH2NL|388677|notch 2 N-terminal like##BC010154|NOTCH2NL|388677|notch 2 N-terminal like##AK075065|NOTCH2NL|388677|notch 2 N-terminal like##BC090943|NOTCH2NL|388677|notch 2 N-terminal like##BC019835|NOTCH2NL|388677|notch 2 N-terminal like##BC065219|NOTCH2NL|388677|notch 2 N-terminal like##BC084572|NOTCH2NL|388677|notch 2 N-terminal like##DQ892584|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##DQ895801|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##NM_145277|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_202004|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213652|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213653|HFE2|148738|hemochromatosis type 2 (juvenile)##AK223575|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092682|HFE2|148738|hemochromatosis type 2 (juvenile)##AK315852|HFE2|148738|hemochromatosis type 2 (juvenile)##BC017926|HFE2|148738|hemochromatosis type 2 (juvenile)##AK096905|HFE2|148738|hemochromatosis type 2 (juvenile)##AK290831|HFE2|148738|hemochromatosis type 2 (juvenile)##AK292742|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092692|HFE2|148738|hemochromatosis type 2 (juvenile)##AK124273|HFE2|148738|hemochromatosis type 2 (juvenile)##BC085604|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_006472|TXNIP|10628|thioredoxin interacting protein##AK301203|TXNIP|10628|thioredoxin interacting protein##BX537824|TXNIP|10628|thioredoxin interacting protein##AK226090|TXNIP|10628|thioredoxin interacting protein##S73591|TXNIP|10628|thioredoxin interacting protein##BC093702|TXNIP|10628|thioredoxin interacting protein##BC093704|TXNIP|10628|thioredoxin interacting protein##AY594328|TXNIP|10628|thioredoxin interacting protein##BC024305|TXNIP|10628|thioredoxin interacting protein##AK301148|TXNIP|10628|thioredoxin interacting protein##AK092209|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##AK056984|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC004355|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##NM_032305|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC050418|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like	0.968636	CTCF.p2:8:0.969
chr18	8696882	8696986	reg1010071.p2	10.379	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	-87188	+	TSC_hg19_v1_chr18_+_8609434 BC071600 BC098407 BC050338 NM_001025300	-87498	+	TSC_hg19_v1_chr18_+_7946885 AK294492	-750028	+	AK131528 NM_015210	20434	+	AB384528 TSC_hg19_v1_chr18_+_8718600	21590	+	TSC_hg19_v1_chr18_+_9102620 NM_021074	405688	+	BC071600|RAB12|201475|RAB12, member RAS oncogene family##BC098407|RAB12|201475|RAB12, member RAS oncogene family##BC050338|RAB12|201475|RAB12, member RAS oncogene family##NM_001025300|RAB12|201475|RAB12, member RAS oncogene family##AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165##NM_021074|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa	0.997808	CTCF.p2:1:0.998	CTCF.p2:-108:0.417
chr6	64512616	64512753	reg1013788.p1	10.379	+	AF091622 BC113650 BC113652 NM_015153 D87685 AB385299	-156242	+	TSC_hg19_v1_chr6_+_64346027 BX648268 AK290491	-166667	+	TSC_hg19_v1_chr6_+_64345729 AK315868 AK298580	-166861	+	AY358133 NM_198283 AK310478	1777021	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	1904409	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	4086344	-	AF091622|PHF3|23469|PHD finger protein 3##BC113650|PHF3|23469|PHD finger protein 3##BC113652|PHF3|23469|PHD finger protein 3##NM_015153|PHF3|23469|PHD finger protein 3##D87685|PHF3|23469|PHD finger protein 3##BX648268|PHF3|23469|PHD finger protein 3##AK290491|PHF3|23469|PHD finger protein 3##AK315868|PHF3|23469|PHD finger protein 3##AK298580|PHF3|23469|PHD finger protein 3##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3	0.071269	
chr8	28645403	28645525	reg1009898.p2	10.379	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	-86314	+	TSC_hg19_v1_chr8_+_28559032 AB011091	-86389	+	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	-293699	+	TSC_hg19_v1_chr8_-_28747454 BC016687 AK225072 AK304525 AK298468 NM_001172562 BC025267 AK300593 AK295977 AK001733 AK225530	101996	-	NM_001145159 NM_018250	102233	-	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	102453	+	AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3##AB011091|EXTL3|2137|exostoses (multiple)-like 3##NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##BC016687|INTS9|55756|integrator complex subunit 9##AK225072|INTS9|55756|integrator complex subunit 9##AK304525|INTS9|55756|integrator complex subunit 9##AK298468|INTS9|55756|integrator complex subunit 9##NM_001172562|INTS9|55756|integrator complex subunit 9##BC025267|INTS9|55756|integrator complex subunit 9##AK300593|INTS9|55756|integrator complex subunit 9##AK295977|INTS9|55756|integrator complex subunit 9##AK001733|INTS9|55756|integrator complex subunit 9##AK225530|INTS9|55756|integrator complex subunit 9##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1	0.997957	CTCF.p2:6:0.998
chr17	10199191	10199302	reg1009499.p1	10.377	+	TSC_hg19_v1_chr17_-_10101924 AY327406 NM_201433	-97340	-	TSC_hg19_v1_chr17_-_9940004 AK057761 BC006454 NM_201432	-259213	-	TSC_hg19_v1_chr17_-_9939883 AK292987	-259368	-	AF111782 NM_003802	77075	-	AK303395 NM_002472	126020	-	AF111783 NM_017533	173629	-	AY327406|GAS7|8522|growth arrest-specific 7##NM_201433|GAS7|8522|growth arrest-specific 7##AK057761|GAS7|8522|growth arrest-specific 7##BC006454|GAS7|8522|growth arrest-specific 7##NM_201432|GAS7|8522|growth arrest-specific 7##AK292987|GAS7|8522|growth arrest-specific 7##AF111782|MYH13|8735|myosin, heavy chain 13, skeletal muscle##NM_003802|MYH13|8735|myosin, heavy chain 13, skeletal muscle##AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle	0.992788	CTCF.p2:-5:0.993
chr17	56327110	56327255	reg1011003.p1	10.377	+	NM_001160102 NM_006151 TSC_hg19_v1_chr17_+_56315910 BC107166 BC107167 BX648309 AK303903 U39573 AK310965 AK300653 AK308378 AK131496 EF579964	-11257	+	AK310815 NM_001165927	-30217	-	TSC_hg19_v1_chr17_-_56296608 AK301020 BC010061 DQ185029 NM_017777	-30556	-	HQ258645 S56200 TSC_hg19_v1_chr17_-_56358145	30950	-	TSC_hg19_v1_chr17_-_56358164 BC130476	30983	-	J02694 X04876 M19507 NM_000250 TSC_hg19_v1_chr17_-_56358297	31117	-	NM_001160102|LPO|4025|lactoperoxidase##NM_006151|LPO|4025|lactoperoxidase##BC107166|LPO|4025|lactoperoxidase##BC107167|LPO|4025|lactoperoxidase##BX648309|LPO|4025|lactoperoxidase##AK303903|LPO|4025|lactoperoxidase##U39573|LPO|4025|lactoperoxidase##AK310965|LPO|4025|lactoperoxidase##AK300653|LPO|4025|lactoperoxidase##AK308378|LPO|4025|lactoperoxidase##AK131496|LPO|4025|lactoperoxidase##EF579964|LPO|4025|lactoperoxidase##AK310815|MKS1|54903|Meckel syndrome, type 1##NM_001165927|MKS1|54903|Meckel syndrome, type 1##AK301020|MKS1|54903|Meckel syndrome, type 1##BC010061|MKS1|54903|Meckel syndrome, type 1##DQ185029|MKS1|54903|Meckel syndrome, type 1##NM_017777|MKS1|54903|Meckel syndrome, type 1##HQ258645|MPO|4353|myeloperoxidase##S56200|MPO|4353|myeloperoxidase##BC130476|MPO|4353|myeloperoxidase##J02694|MPO|4353|myeloperoxidase##X04876|MPO|4353|myeloperoxidase##M19507|MPO|4353|myeloperoxidase##NM_000250|MPO|4353|myeloperoxidase	0.988391	CTCF.p2:20:0.988
chr6	44235873	44236002	reg1010008.p1	10.377	+	AB590964 NM_004556 U91616	-2426	-	TSC_hg19_v1_chr6_-_44233257 BC011676 BC063609 AK301360	-2673	-	AK307572 AY491520 DQ893314 DQ896628 DQ896632 EU176354 AB106538 TSC_hg19_v1_chr6_-_44225250 AK075456 AB097021 AB097039 AK123749 AK293344 BC024288 AK293251 NM_178148	-10772	-	NM_001137560 TSC_hg19_v1_chr6_+_44238533 BC040881	2594	+	TSC_hg19_v1_chr6_+_44244466 AK094365	8576	+	BC035022 AK304265 AK301825 NM_182539	29503	-	NM_004556|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##U91616|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##BC011676|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##BC063609|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##AK301360|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##AK307572|SLC35B2|347734|solute carrier family 35, member B2##AY491520|SLC35B2|347734|solute carrier family 35, member B2##DQ893314|SLC35B2|347734|solute carrier family 35, member B2##DQ896628|SLC35B2|347734|solute carrier family 35, member B2##DQ896632|SLC35B2|347734|solute carrier family 35, member B2##EU176354|SLC35B2|347734|solute carrier family 35, member B2##AB106538|SLC35B2|347734|solute carrier family 35, member B2##AK075456|SLC35B2|347734|solute carrier family 35, member B2##AB097021|SLC35B2|347734|solute carrier family 35, member B2##AB097039|SLC35B2|347734|solute carrier family 35, member B2##AK123749|SLC35B2|347734|solute carrier family 35, member B2##AK293344|SLC35B2|347734|solute carrier family 35, member B2##BC024288|SLC35B2|347734|solute carrier family 35, member B2##AK293251|SLC35B2|347734|solute carrier family 35, member B2##NM_178148|SLC35B2|347734|solute carrier family 35, member B2##NM_001137560|TMEM151B|441151|transmembrane protein 151B##AK094365|TMEM151B|441151|transmembrane protein 151B##BC035022|TCTE1|202500|t-complex-associated-testis-expressed 1##AK304265|TCTE1|202500|t-complex-associated-testis-expressed 1##AK301825|TCTE1|202500|t-complex-associated-testis-expressed 1##NM_182539|TCTE1|202500|t-complex-associated-testis-expressed 1	0.697244	CTCF.p2:-4:0.697
chr10	119297224	119297353	reg1010480.p1	10.376	+	CU688476 TSC_hg19_v1_chr10_-_119134939 BC012186 BC028375 NM_173791 AK091746 AX747159 BC033019	-162407	-	NM_003054 BC030593 TSC_hg19_v1_chr10_+_119000626 AK314997 L23205 L09118 X71354 L14269 BC108927 BC108928	-296638	+	AB087138 AB464053 NM_181840	-340289	+	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	4628	-	AF301598 NM_001165924 NM_004098	4667	+	TSC_hg19_v1_chr10_+_119302713 AB463605	5455	+	BC012186|PDZD8|118987|PDZ domain containing 8##BC028375|PDZD8|118987|PDZ domain containing 8##NM_173791|PDZD8|118987|PDZ domain containing 8##AK091746|PDZD8|118987|PDZ domain containing 8##BC033019|PDZD8|118987|PDZ domain containing 8##NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AB087138|KCNK18|338567|potassium channel, subfamily K, member 18##NM_181840|KCNK18|338567|potassium channel, subfamily K, member 18##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AF301598|EMX2|2018|empty spiracles homeobox 2##NM_001165924|EMX2|2018|empty spiracles homeobox 2##NM_004098|EMX2|2018|empty spiracles homeobox 2	0.051185	
chr2	24644642	24644751	reg1009522.p1	10.376	+	TSC_hg19_v1_chr2_-_24583385 AB033082 BC146779 AF182198 AF182199 BC038963 NM_006277 NM_019595 NM_147152	-61216	-	BC050462 NM_001040710	-246725	+	TSC_hg19_v1_chr2_+_24346339 NM_001145710	-298337	+	NM_003743 NM_147223 NM_147233 AJ000881 AJ000882 U59302	162681	+	TSC_hg19_v1_chr2_-_25016225 CU687260 BC073803 NM_001013663	371542	-	NM_001199803 AK027859 TSC_hg19_v1_chr2_+_25016332 NM_024322 BC002870 AK315483	371575	+	AB033082|ITSN2|50618|intersectin 2##BC146779|ITSN2|50618|intersectin 2##AF182198|ITSN2|50618|intersectin 2##AF182199|ITSN2|50618|intersectin 2##BC038963|ITSN2|50618|intersectin 2##NM_006277|ITSN2|50618|intersectin 2##NM_019595|ITSN2|50618|intersectin 2##NM_147152|ITSN2|50618|intersectin 2##BC050462|C2orf84|653140|chromosome 2 open reading frame 84##NM_001040710|C2orf84|653140|chromosome 2 open reading frame 84##NM_001145710|LOC375190|375190|UPF0638 protein B##NM_003743|NCOA1|8648|nuclear receptor coactivator 1##NM_147223|NCOA1|8648|nuclear receptor coactivator 1##NM_147233|NCOA1|8648|nuclear receptor coactivator 1##AJ000881|NCOA1|8648|nuclear receptor coactivator 1##AJ000882|NCOA1|8648|nuclear receptor coactivator 1##U59302|NCOA1|8648|nuclear receptor coactivator 1##BC073803|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001013663|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001199803|CENPO|79172|centromere protein O##AK027859|CENPO|79172|centromere protein O##NM_024322|CENPO|79172|centromere protein O##BC002870|CENPO|79172|centromere protein O##AK315483|CENPO|79172|centromere protein O	0.862574	CTCF.p2:-2:0.863
chr10	103330033	103330174	reg1009922.p2	10.375	+	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	-216231	+	BC136321 BC069156 NM_006562 X90828	-341401	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-438925	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	17826	-	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	17906	-	TSC_hg19_v1_chr10_+_103348081 BC031695 BC001082 NM_015448 AK290154 AB527777 EU832466 EU832547 AY532267	17967	+	NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda##BC031695|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##BC001082|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##NM_015448|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AK290154|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832466|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832547|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AY532267|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)	0.996326	CTCF.p2:34:0.996
chr14	50332209	50332334	reg1012752.p1	10.375	+	TSC_hg19_v1_chr14_-_50329567 X02067	-2675	-	TSC_hg19_v1_chr14_-_50319530 AK295010 AK293236 BC006001 BC056687 NM_004713	-12738	-	TSC_hg19_v1_chr14_-_50319497 AK304695 AK308537	-12775	-	TSC_hg19_v1_chr14_+_50359731 NM_001663	27459	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	27547	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	27562	+	X02067|RN7SL2|378706|RNA, 7SL, cytoplasmic 2##AK295010|NEMF|9147|nuclear export mediator factor##AK293236|NEMF|9147|nuclear export mediator factor##BC006001|NEMF|9147|nuclear export mediator factor##BC056687|NEMF|9147|nuclear export mediator factor##NM_004713|NEMF|9147|nuclear export mediator factor##AK304695|NEMF|9147|nuclear export mediator factor##AK308537|NEMF|9147|nuclear export mediator factor##NM_001663|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6	0.282788	CTCF.p2:-1:0.283
chr17	16318366	16318486	reg1009841.p1	10.375	+	AK129498 BC015127 BC026301 BC031027 BC038999 TSC_hg19_v1_chr17_+_16284408 BC046123 BC009301	-34012	+	TSC_hg19_v1_chr17_+_16284404 AK300882	-34024	+	TSC_hg19_v1_chr17_+_16284371 BC000379 NM_018955	-34062	+	TSC_hg19_v1_chr17_+_16318881 AK289705 NM_016113 BC018926 BC051305	447	+	TSC_hg19_v1_chr17_+_16318917 AK001896	492	+	TSC_hg19_v1_chr17_+_16319096 AF103906	679	+	AK129498|UBB|7314|ubiquitin B##BC015127|UBB|7314|ubiquitin B##BC026301|UBB|7314|ubiquitin B##BC031027|UBB|7314|ubiquitin B##BC038999|UBB|7314|ubiquitin B##BC046123|UBB|7314|ubiquitin B##BC009301|UBB|7314|ubiquitin B##AK300882|UBB|7314|ubiquitin B##BC000379|UBB|7314|ubiquitin B##NM_018955|UBB|7314|ubiquitin B##AK289705|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##NM_016113|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##BC018926|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##BC051305|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AK001896|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AF103906|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2	0.949798	CTCF.p2:12:0.950
chr13	27070865	27070967	reg1010668.p1	10.373	+	BC069634 BC104492 BC105950 BC107601 NM_001260 X85753 AY702976 CU686950	-242150	+	TSC_hg19_v1_chr13_+_26828240 BC094784	-242675	+	TSC_hg19_v1_chr13_-_26796406 AF293342 AJ010346 CR749238 AK312435 NM_005977	-274491	-	TSC_hg19_v1_chr13_+_27131854 AK289845 BC050283 NM_006646	60918	+	TSC_hg19_v1_chr13_+_27131892 AF454702	60986	+	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	263937	-	BC069634|CDK8|1024|cyclin-dependent kinase 8##BC104492|CDK8|1024|cyclin-dependent kinase 8##BC105950|CDK8|1024|cyclin-dependent kinase 8##BC107601|CDK8|1024|cyclin-dependent kinase 8##NM_001260|CDK8|1024|cyclin-dependent kinase 8##X85753|CDK8|1024|cyclin-dependent kinase 8##AY702976|CDK8|1024|cyclin-dependent kinase 8##BC094784|CDK8|1024|cyclin-dependent kinase 8##AF293342|RNF6|6049|ring finger protein (C3H2C3 type) 6##AJ010346|RNF6|6049|ring finger protein (C3H2C3 type) 6##CR749238|RNF6|6049|ring finger protein (C3H2C3 type) 6##AK312435|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_005977|RNF6|6049|ring finger protein (C3H2C3 type) 6##AK289845|WASF3|10810|WAS protein family, member 3##BC050283|WASF3|10810|WAS protein family, member 3##NM_006646|WASF3|10810|WAS protein family, member 3##AF454702|WASF3|10810|WAS protein family, member 3##AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12	0.994764	CTCF.p2:10:0.995
chr17	19896210	19896335	reg1010592.p1	10.373	+	TSC_hg19_v1_chr17_-_19881144 AK295180	-15114	-	AB590263 CU677815 DQ270159 DQ891477 DQ894666 TSC_hg19_v1_chr17_-_19881134 AK312438 BC017055 AF037439 NM_007202	-15210	-	TSC_hg19_v1_chr17_-_19771250 BC034988 AB014523 NM_001142610 NM_014683 BC039310	-125129	-	TSC_hg19_v1_chr17_+_19912678 AK094274 NM_001243439 AK295093	16396	+	TSC_hg19_v1_chr17_+_19976949 AK314341	80630	+	AY816328 AY816329 NM_001033553 NM_152904 AB041533	94062	+	AK295180|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ270159|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ891477|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ894666|AKAP10|11216|A kinase (PRKA) anchor protein 10##AK312438|AKAP10|11216|A kinase (PRKA) anchor protein 10##BC017055|AKAP10|11216|A kinase (PRKA) anchor protein 10##AF037439|AKAP10|11216|A kinase (PRKA) anchor protein 10##NM_007202|AKAP10|11216|A kinase (PRKA) anchor protein 10##BC034988|ULK2|9706|unc-51-like kinase 2 (C. elegans)##AB014523|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_001142610|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_014683|ULK2|9706|unc-51-like kinase 2 (C. elegans)##BC039310|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_001243439|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK295093|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK314341|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816328|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816329|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033553|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_152904|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AB041533|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	0.992591	CTCF.p2:-25:0.993
chr4	15233280	15233402	reg1009354.p1	10.373	+	TSC_hg19_v1_chr4_+_15005451 AY247744 AY255519 BC103939 BC103940 BC103941 BC103942 BC105925	-227880	+	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	-229044	+	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	-229346	-	BX647781 NM_001135170 AK314802 BC022187 BC024015	108244	+	NM_001135171	142833	+	NM_031911 AF329839	196306	+	AY247744|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##AY255519|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103939|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103940|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103941|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103942|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC105925|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135171|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	0.944433	CTCF.p2:-11:0.944
chr5	159448966	159449096	reg1012176.p1	10.373	+	AK222641 TSC_hg19_v1_chr5_+_159436161 AK222984 NM_003314 U46570	-12864	+	TSC_hg19_v1_chr5_+_159436145 AK315262	-12884	+	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	-105206	+	TSC_hg19_v1_chr5_-_159546405 AB067522 BC035076 BC105110 BC143437 NM_001130864 NM_052927	97428	-	DQ132786 NM_001130958	165342	+	NM_001040442 AB528665	177049	+	AK222641|TTC1|7265|tetratricopeptide repeat domain 1##AK222984|TTC1|7265|tetratricopeptide repeat domain 1##NM_003314|TTC1|7265|tetratricopeptide repeat domain 1##U46570|TTC1|7265|tetratricopeptide repeat domain 1##AK315262|TTC1|7265|tetratricopeptide repeat domain 1##NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##AB067522|PWWP2A|114825|PWWP domain containing 2A##BC035076|PWWP2A|114825|PWWP domain containing 2A##BC105110|PWWP2A|114825|PWWP domain containing 2A##BC143437|PWWP2A|114825|PWWP domain containing 2A##NM_001130864|PWWP2A|114825|PWWP domain containing 2A##NM_052927|PWWP2A|114825|PWWP domain containing 2A##DQ132786|FABP6|2172|fatty acid binding protein 6, ileal##NM_001130958|FABP6|2172|fatty acid binding protein 6, ileal##NM_001040442|FABP6|2172|fatty acid binding protein 6, ileal	0.712246	CTCF.p2:-5:0.712
chr10	11466644	11466766	reg1011000.p1	10.371	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-259213	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-259259	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-259280	+	NM_001080491	107568	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	186931	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	317693	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.078858	
chr15	41198677	41198794	reg1010737.p1	10.371	+	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	-12035	+	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	-32288	-	TSC_hg19_v1_chr15_+_41136676 NM_001032367 AK303899 BC004140 BT007425 CU676280 DQ890747 DQ892293 DQ895493	-62034	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	22963	+	NM_001142776 NM_024111 TSC_hg19_v1_chr15_+_41245671 BC019625 BC001683 BC001847 AY702027	46969	+	TSC_hg19_v1_chr15_-_41364176 AK057582	165469	-	AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)##NM_001142776|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##NM_024111|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC019625|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001683|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001847|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AY702027|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AK057582|INO80|54617|INO80 homolog (S. cerevisiae)	0.98645	CTCF.p2:-15:0.962
chr18	11310632	11310739	reg1010652.p2	10.371	+	NM_022068	-161925	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-784588	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-784629	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	378527	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	440830	+	L10665 TSC_hg19_v1_chr18_+_11752245	441530	+	NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.998413	CTCF.p2:-2:0.998
chr21	34025777	34025896	reg1010640.p1	10.371	+	AL355729 TSC_hg19_v1_chr21_-_33984897 AK055328 AK223318 AK225697 AK300970 AK000474 AK098577 NM_021254	-40942	-	TSC_hg19_v1_chr21_-_33984683 AF282851 BC000709	-41158	-	DQ655907 DQ655908 TSC_hg19_v1_chr21_-_33984495 CU674350 DQ656039	-41314	-	BC098395 TSC_hg19_v1_chr21_-_34100223	74382	-	TSC_hg19_v1_chr21_-_34100236 AK307762 BC019630 AB020717 NM_001160302 NM_001160306 AF009039 AF009040	74422	-	TSC_hg19_v1_chr21_-_34100325 NM_003895 NM_203446	74497	-	AK055328|C21orf59|56683|chromosome 21 open reading frame 59##AK223318|C21orf59|56683|chromosome 21 open reading frame 59##AK225697|C21orf59|56683|chromosome 21 open reading frame 59##AK300970|C21orf59|56683|chromosome 21 open reading frame 59##AK000474|C21orf59|56683|chromosome 21 open reading frame 59##AK098577|C21orf59|56683|chromosome 21 open reading frame 59##NM_021254|C21orf59|56683|chromosome 21 open reading frame 59##AF282851|C21orf59|56683|chromosome 21 open reading frame 59##BC000709|C21orf59|56683|chromosome 21 open reading frame 59##DQ655907|C21orf59|56683|chromosome 21 open reading frame 59##DQ655908|C21orf59|56683|chromosome 21 open reading frame 59##DQ656039|C21orf59|56683|chromosome 21 open reading frame 59##BC098395|SYNJ1|8867|synaptojanin 1##AK307762|SYNJ1|8867|synaptojanin 1##BC019630|SYNJ1|8867|synaptojanin 1##AB020717|SYNJ1|8867|synaptojanin 1##NM_001160302|SYNJ1|8867|synaptojanin 1##NM_001160306|SYNJ1|8867|synaptojanin 1##AF009039|SYNJ1|8867|synaptojanin 1##AF009040|SYNJ1|8867|synaptojanin 1##NM_003895|SYNJ1|8867|synaptojanin 1##NM_203446|SYNJ1|8867|synaptojanin 1	1.516758	CTCF.p2:-5:0.955	CTCF.p2:-63:0.562
chr11	94630555	94630670	reg1011699.p1	10.370	+	TSC_hg19_v1_chr11_+_94501528 BX648729 NM_130847 AK093699 AX748266 AF453742 BC037539 AK074084 AM393663	-129023	+	NM_152431 AB079366 AK093475 AX748151 BC031060 DQ891240 DQ894425 AB590313 CU689100	-330034	+	TSC_hg19_v1_chr11_+_94277605 M58596	-353013	+	TSC_hg19_v1_chr11_-_94706721 AK309042 AF110775 AF161497 AK225956 AK314900 BC032629 AJ250393 BC040946 BC006975	76110	-	TSC_hg19_v1_chr11_-_94706742 NM_016403	76145	-	TSC_hg19_v1_chr11_+_94706841 BC031862 NM_018039	76223	+	BX648729|AMOTL1|154810|angiomotin like 1##NM_130847|AMOTL1|154810|angiomotin like 1##AK093699|AMOTL1|154810|angiomotin like 1##AF453742|AMOTL1|154810|angiomotin like 1##BC037539|AMOTL1|154810|angiomotin like 1##AK074084|AMOTL1|154810|angiomotin like 1##AM393663|AMOTL1|154810|angiomotin like 1##NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)##AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)##AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)##BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##AK309042|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AF110775|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AF161497|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AK225956|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AK314900|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC032629|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AJ250393|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC040946|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC006975|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##NM_016403|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC031862|KDM4D|55693|lysine (K)-specific demethylase 4D##NM_018039|KDM4D|55693|lysine (K)-specific demethylase 4D	0.455406	CTCF.p2:14:0.455
chr14	58159538	58159653	reg1011383.p1	10.370	+	HQ258368 BC117405 BC143565 BC143566 BC143567 BC143568 AK307238 AK223127 AK001512 BC028060 NM_018168	-199092	-	TSC_hg19_v1_chr14_+_57857318 BC118589 BC122557	-302263	+	AK296372 AK092674 AX747665 NM_001011713 TSC_hg19_v1_chr14_+_57857298 AK304257 AK307348	-302312	+	NM_001206920	172996	-	BC146861 BX161411 NM_001001872 AK292605 BX161448 TSC_hg19_v1_chr14_-_58618906	459261	-	TSC_hg19_v1_chr14_-_58618916 AK292513	459329	-	HQ258368|C14orf105|55195|chromosome 14 open reading frame 105##BC117405|C14orf105|55195|chromosome 14 open reading frame 105##BC143565|C14orf105|55195|chromosome 14 open reading frame 105##BC143566|C14orf105|55195|chromosome 14 open reading frame 105##BC143567|C14orf105|55195|chromosome 14 open reading frame 105##BC143568|C14orf105|55195|chromosome 14 open reading frame 105##AK307238|C14orf105|55195|chromosome 14 open reading frame 105##AK223127|C14orf105|55195|chromosome 14 open reading frame 105##AK001512|C14orf105|55195|chromosome 14 open reading frame 105##BC028060|C14orf105|55195|chromosome 14 open reading frame 105##NM_018168|C14orf105|55195|chromosome 14 open reading frame 105##BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK296372|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK092674|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##NM_001011713|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK304257|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK307348|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##NM_001206920|SLC35F4|341880|solute carrier family 35, member F4##BC146861|C14orf37|145407|chromosome 14 open reading frame 37##BX161411|C14orf37|145407|chromosome 14 open reading frame 37##NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37##AK292605|C14orf37|145407|chromosome 14 open reading frame 37##BX161448|C14orf37|145407|chromosome 14 open reading frame 37##AK292513|C14orf37|145407|chromosome 14 open reading frame 37	0.258853	CTCF.p2:-7:0.259
chr6	88947937	88948058	reg1009201.p2	10.370	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-72231	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-92961	-	BC029488 NM_030960 AF203447	-190467	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	725194	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	725311	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	725350	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.649734	CTCF.p2:5:0.650
chr7	150660183	150660309	reg1011020.p1	10.370	+	TSC_hg19_v1_chr7_-_150652893 BC127672 BC127673 BC080563 NM_001204798 NM_172057 DQ120125	-7319	-	TSC_hg19_v1_chr7_+_150549604 U11863 AK092514 AK296638 AK307278 AK314806 BC014093 M55602	-110634	+	TSC_hg19_v1_chr7_+_150549567 U11862 NM_001091	-110695	+	TSC_hg19_v1_chr7_-_150675385 DQ525913 NM_000238 NM_172056	15123	-	NM_000603 BC063294 AK300390	27921	+	AK292928 AK302686 M93718 AK315213 TSC_hg19_v1_chr7_+_150690869 AK223636 AK225827 M95296 BC069465 HQ257992 AF400594 DQ256129 DQ256130 DQ256131 NM_001160109 NM_001160110 NM_001160111	30618	+	BC127673|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_001204798|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172057|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##DQ120125|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##U11863|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK092514|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK296638|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK314806|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##BC014093|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##M55602|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##U11862|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##NM_001091|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##DQ525913|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_000238|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172056|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##HQ257992|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	0.0	
chr11	96160076	96160194	reg1009341.p2	10.369	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-36961	+	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	-37093	-	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	-83732	-	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	2731614	+	AB013802 AB013803 NM_175566	3266738	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	4397993	+	AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42	0.111487	
chr6_cox_hap2	3028920	3029052	reg1012045.p1	10.369	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.44778	CTCF.p2:-12:0.429
chrX	43208783	43208915	reg1012313.p1	10.369	+	AB208859 AB590064 HQ258518 AY705392 AF035582 BC117311 BC143454 BC143456 AF032119 NM_001126054 NM_001126055 NM_003688 AK313399	-1426524	-	BC070180 NM_080817 AK122626 AK313702 AL832460	-1625429	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	-1660582	+	BC044787 TSC_hg19_v1_chrX_+_43514289	305374	+	TSC_hg19_v1_chrX_+_43515423 NM_000240 AK223499	306565	+	TSC_hg19_v1_chrX_+_43515457 M68840	306631	+	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##BC044787|MAOA|4128|monoamine oxidase A##NM_000240|MAOA|4128|monoamine oxidase A##AK223499|MAOA|4128|monoamine oxidase A##M68840|MAOA|4128|monoamine oxidase A	0.946132	CTCF.p2:-8:0.946
chr17	27090826	27090957	reg1009586.p1	10.368	+	TSC_hg19_v1_chr17_+_27071025 NM_004295 BC001769 X80200 AK300804 AY937222 AY937223 AY937224 AY937225 AB529167 DQ892825 DQ896071 CU674876 AF082185	-19822	+	BC112240 BC113705 AK301429 AY242354 AY267371 HQ258347 NM_178170	-35077	+	NM_001160407	-36943	-	TSC_hg19_v1_chr17_-_27139467 AK095569	48556	-	BC021228 TSC_hg19_v1_chr17_-_27169811 BX647766 AK299477 AK001562 AK057665 NM_001077498 NM_018182	78899	-	TSC_hg19_v1_chr17_+_27182033 AB049388 AK023342 AY007435 BX537542 BC019094 NM_005702 CU676380 DQ892626 DQ895866 AF082657 AF082658	91132	+	NM_004295|TRAF4|9618|TNF receptor-associated factor 4##BC001769|TRAF4|9618|TNF receptor-associated factor 4##X80200|TRAF4|9618|TNF receptor-associated factor 4##AK300804|TRAF4|9618|TNF receptor-associated factor 4##AY937222|TRAF4|9618|TNF receptor-associated factor 4##AY937223|TRAF4|9618|TNF receptor-associated factor 4##AY937224|TRAF4|9618|TNF receptor-associated factor 4##DQ892825|TRAF4|9618|TNF receptor-associated factor 4##DQ896071|TRAF4|9618|TNF receptor-associated factor 4##AF082185|TRAF4|9618|TNF receptor-associated factor 4##BC112240|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##BC113705|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AK301429|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY242354|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY267371|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##HQ258347|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_178170|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_001160407|TLCD1|116238|TLC domain containing 1##AK095569|C17orf63|55731|chromosome 17 open reading frame 63##BC021228|C17orf63|55731|chromosome 17 open reading frame 63##BX647766|C17orf63|55731|chromosome 17 open reading frame 63##AK299477|C17orf63|55731|chromosome 17 open reading frame 63##AK001562|C17orf63|55731|chromosome 17 open reading frame 63##AK057665|C17orf63|55731|chromosome 17 open reading frame 63##NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63##NM_018182|C17orf63|55731|chromosome 17 open reading frame 63##AB049388|ERAL1|26284|Era G-protein-like 1 (E. coli)##AK023342|ERAL1|26284|Era G-protein-like 1 (E. coli)##AY007435|ERAL1|26284|Era G-protein-like 1 (E. coli)##BX537542|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC019094|ERAL1|26284|Era G-protein-like 1 (E. coli)##NM_005702|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ892626|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ895866|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082657|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082658|ERAL1|26284|Era G-protein-like 1 (E. coli)	0.91495	CTCF.p2:24:0.915
chr2	42722264	42722378	reg1009881.p1	10.368	+	TSC_hg19_v1_chr2_+_42721701 AK127245	-619	+	TSC_hg19_v1_chr2_-_42721118 AF454547 AF454548 BC071558 AF348982 NM_133329 NM_172344	-1118	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	-1763	-	TSC_hg19_v1_chr2_+_42795781 BC053631 NM_020744 BC004227	73400	+	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	73576	+	AY158687 AB528920 AB083055 BC063549 NM_148962	268979	-	AK127245|MTA3|57504|metastasis associated 1 family, member 3##AF454547|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF454548|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##BC071558|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF348982|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##NM_133329|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##NM_172344|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##BC053631|MTA3|57504|metastasis associated 1 family, member 3##NM_020744|MTA3|57504|metastasis associated 1 family, member 3##BC004227|MTA3|57504|metastasis associated 1 family, member 3##AK027304|MTA3|57504|metastasis associated 1 family, member 3##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1	0.770121	CTCF.p2:0:0.621
chr11	47638713	47638841	reg1011713.p1	10.367	+	AF329838 TSC_hg19_v1_chr11_-_47615958 NM_031909	-22846	-	NM_001164379 BC065704	-30541	+	TSC_hg19_v1_chr11_+_47600632 AK294167 DQ891934 DQ895121	-38140	+	CU674434 DQ891810 DQ894993 AK223097 TSC_hg19_v1_chr11_-_47664100 BC000875 AY380792 AF085361 AF176008 AK295218 AK313032 NM_014342	25336	-	AK056687 BC036234 AK303066 AK303875 NM_024783	98134	-	TSC_hg19_v1_chr11_-_47788834 AK123898 AL137480	150056	-	AF329838|C1QTNF4|114900|C1q and tumor necrosis factor related protein 4##NM_031909|C1QTNF4|114900|C1q and tumor necrosis factor related protein 4##NM_001164379|FAM180B|399888|family with sequence similarity 180, member B##BC065704|FAM180B|399888|family with sequence similarity 180, member B##AK294167|NDUFS3|4722|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)##DQ891934|NDUFS3|4722|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)##DQ895121|NDUFS3|4722|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)##DQ891810|MTCH2|23788|mitochondrial carrier 2##DQ894993|MTCH2|23788|mitochondrial carrier 2##AK223097|MTCH2|23788|mitochondrial carrier 2##BC000875|MTCH2|23788|mitochondrial carrier 2##AY380792|MTCH2|23788|mitochondrial carrier 2##AF085361|MTCH2|23788|mitochondrial carrier 2##AF176008|MTCH2|23788|mitochondrial carrier 2##AK295218|MTCH2|23788|mitochondrial carrier 2##AK313032|MTCH2|23788|mitochondrial carrier 2##NM_014342|MTCH2|23788|mitochondrial carrier 2##AK056687|AGBL2|79841|ATP/GTP binding protein-like 2##BC036234|AGBL2|79841|ATP/GTP binding protein-like 2##AK303066|AGBL2|79841|ATP/GTP binding protein-like 2##AK303875|AGBL2|79841|ATP/GTP binding protein-like 2##NM_024783|AGBL2|79841|ATP/GTP binding protein-like 2##AK123898|FNBP4|23360|formin binding protein 4##AL137480|FNBP4|23360|formin binding protein 4	0.918387	CTCF.p2:0:0.918
chr1	225040740	225040893	reg1010907.p1	10.367	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-236637	+	AB209887 NM_001115113 NM_025160	-418816	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-419056	-	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	76549	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	574913	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	574985	-	AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor	0.389602	CTCF.p2:31:0.390
chr17	72733813	72733933	reg1006150.p2	10.367	+	TSC_hg19_v1_chr17_+_72733394 AK098068 NM_001006638 NM_001163990 AK298033 AK296172 BC016615	-494	+	NM_001163989 TSC_hg19_v1_chr17_+_72733040 AK303442 AB528695	-820	+	AF251706 AY303545 AK315165 TSC_hg19_v1_chr17_-_72709081 AK298752 AY358545 AK092757 AX747710 NM_139018 BC028199	-24806	-	TSC_hg19_v1_chr17_+_72744766 NM_004252 AK094467 AK128474 AK026581 BC049220	10887	+	TSC_hg19_v1_chr17_+_72744790 BC003361 AF015926 BC011777 BC053350	10911	+	TSC_hg19_v1_chr17_+_72744800 BC001443	10924	+	AK098068|RAB37|326624|RAB37, member RAS oncogene family##NM_001006638|RAB37|326624|RAB37, member RAS oncogene family##NM_001163990|RAB37|326624|RAB37, member RAS oncogene family##AK296172|RAB37|326624|RAB37, member RAS oncogene family##BC016615|RAB37|326624|RAB37, member RAS oncogene family##NM_001163989|RAB37|326624|RAB37, member RAS oncogene family##AK303442|RAB37|326624|RAB37, member RAS oncogene family##AF251706|CD300LF|146722|CD300 molecule-like family member f##AY303545|CD300LF|146722|CD300 molecule-like family member f##AK315165|CD300LF|146722|CD300 molecule-like family member f##AK298752|CD300LF|146722|CD300 molecule-like family member f##AY358545|CD300LF|146722|CD300 molecule-like family member f##AK092757|CD300LF|146722|CD300 molecule-like family member f##NM_139018|CD300LF|146722|CD300 molecule-like family member f##BC028199|CD300LF|146722|CD300 molecule-like family member f##NM_004252|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK094467|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK128474|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK026581|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC049220|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC003361|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AF015926|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC011777|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC053350|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC001443|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	0.242153	CTCF.p2:11:0.242
chr20	44616016	44616170	reg1011641.p1	10.366	+	TSC_hg19_v1_chr20_-_44600992 AK296989	-15100	-	TSC_hg19_v1_chr20_-_44600828 AF395833 BC041331 BC142981 NM_022095	-15283	-	TSC_hg19_v1_chr20_-_44563695 AK097925	-52399	-	TSC_hg19_v1_chr20_+_44637546 AK298246 AK301446 AK311648 AK313137 AK316145 J05070 NM_004994 AK303080 BC006093 DQ896791 EU176415 AB528343 CU675241	21459	+	TSC_hg19_v1_chr20_+_44650321 NM_001134771	34227	+	TSC_hg19_v1_chr20_+_44657824 NM_020708 AK098371	41730	+	AK296989|ZNF335|63925|zinc finger protein 335##AF395833|ZNF335|63925|zinc finger protein 335##BC041331|ZNF335|63925|zinc finger protein 335##BC142981|ZNF335|63925|zinc finger protein 335##NM_022095|ZNF335|63925|zinc finger protein 335##AK097925|FLJ40606|643549|uncharacterized LOC643549##AK298246|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK301446|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK313137|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK316145|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##J05070|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##NM_004994|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK303080|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##BC006093|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##DQ896791|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##EU176415|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##NM_001134771|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##NM_020708|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK098371|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5	0.999722	CTCF.p2:4:1.000
chr6	3978582	3978716	reg1008487.p1	10.366	+	BC001261 NM_012135 Y18503	-129023	+	NM_183373 TSC_hg19_v1_chr6_-_3752248	-226403	-	TSC_hg19_v1_chr6_-_3720312 BC031944	-258339	-	TSC_hg19_v1_chr6_+_4021647 BC034969 NM_003913 AK291244 AB011108 AF283465 AB385345 AY029347	42940	+	BC039349 NM_173563	100774	-	NM_001085401 BC047663 BC066986	100795	+	BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B##NM_183373|PXDC1|221749|PX domain containing 1##BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##BC039349|C6orf146|222826|chromosome 6 open reading frame 146##NM_173563|C6orf146|222826|chromosome 6 open reading frame 146##NM_001085401|C6orf201|404220|chromosome 6 open reading frame 201##BC047663|C6orf201|404220|chromosome 6 open reading frame 201##BC066986|C6orf201|404220|chromosome 6 open reading frame 201	0.887329	CTCF.p2:-38:0.887
chr12	102153334	102153473	reg1010249.p1	10.365	+	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	-20184	-	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	-61781	+	AK296681 NM_002465 NM_206819 NM_206820 NM_206821 AK056587 AK292976 AK295727 AK303401 BC015187 BC030980 BC065720 TSC_hg19_v1_chr12_+_101988748 BC092418 X66276 X73114 AL831993 AL832000 AL832332 AL832350 AL832354 AL832456 BC117217 BC143495 BC143502 BC143503 BC143504 AL834249 BX649073 AB385254 AM392734 EU831907 EU832001	-164607	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	71183	-	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	117715	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	118055	+	AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##AK296681|MYBPC1|4604|myosin binding protein C, slow type##NM_002465|MYBPC1|4604|myosin binding protein C, slow type##NM_206819|MYBPC1|4604|myosin binding protein C, slow type##NM_206820|MYBPC1|4604|myosin binding protein C, slow type##NM_206821|MYBPC1|4604|myosin binding protein C, slow type##AK056587|MYBPC1|4604|myosin binding protein C, slow type##AK292976|MYBPC1|4604|myosin binding protein C, slow type##AK295727|MYBPC1|4604|myosin binding protein C, slow type##AK303401|MYBPC1|4604|myosin binding protein C, slow type##BC015187|MYBPC1|4604|myosin binding protein C, slow type##BC030980|MYBPC1|4604|myosin binding protein C, slow type##BC065720|MYBPC1|4604|myosin binding protein C, slow type##BC092418|MYBPC1|4604|myosin binding protein C, slow type##X66276|MYBPC1|4604|myosin binding protein C, slow type##X73114|MYBPC1|4604|myosin binding protein C, slow type##AL831993|MYBPC1|4604|myosin binding protein C, slow type##AL832000|MYBPC1|4604|myosin binding protein C, slow type##AL832332|MYBPC1|4604|myosin binding protein C, slow type##AL832350|MYBPC1|4604|myosin binding protein C, slow type##AL832354|MYBPC1|4604|myosin binding protein C, slow type##AL832456|MYBPC1|4604|myosin binding protein C, slow type##BC117217|MYBPC1|4604|myosin binding protein C, slow type##BC143495|MYBPC1|4604|myosin binding protein C, slow type##BC143502|MYBPC1|4604|myosin binding protein C, slow type##BC143503|MYBPC1|4604|myosin binding protein C, slow type##BC143504|MYBPC1|4604|myosin binding protein C, slow type##AL834249|MYBPC1|4604|myosin binding protein C, slow type##BX649073|MYBPC1|4604|myosin binding protein C, slow type##AM392734|MYBPC1|4604|myosin binding protein C, slow type##EU831907|MYBPC1|4604|myosin binding protein C, slow type##EU832001|MYBPC1|4604|myosin binding protein C, slow type##AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1	0.0	
chr1	9555421	9555524	reg1009441.p1	10.365	+	TSC_hg19_v1_chr1_+_9415945 CU677397	-139526	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	-202503	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	-202535	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	44060	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	44164	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	93484	+	AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201	0.999575	CTCF.p2:0:1.000
chr2	207665389	207665507	reg1010464.p1	10.364	+	AK021557 TSC_hg19_v1_chr2_+_207630326 AK001516 AF223470 AL833877	-35125	+	NM_001136193 NM_001136194 NM_014929	-35337	+	AK292386 BC033509 BC088356 AK302250 AK309144 NM_001039845 AK308257	-35418	-	BC112076 BC112078 NM_173077 AJ422118	138852	+	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	365208	-	BC012919 TSC_hg19_v1_chr2_-_208031680	366177	-	AK021557|FASTKD2|22868|FAST kinase domains 2##AK001516|FASTKD2|22868|FAST kinase domains 2##AF223470|FASTKD2|22868|FAST kinase domains 2##AL833877|FASTKD2|22868|FAST kinase domains 2##NM_001136193|FASTKD2|22868|FAST kinase domains 2##NM_001136194|FASTKD2|22868|FAST kinase domains 2##NM_014929|FASTKD2|22868|FAST kinase domains 2##AK292386|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##BC033509|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##BC088356|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK302250|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK309144|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##NM_001039845|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK308257|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	0.617975	CTCF.p2:-28:0.618
chr3	38159605	38159734	reg1012311.p1	10.364	+	AB020522 BC129824 BC129825 BC171799 NM_007335 NM_007337 AK302803 AB425198	-78960	+	AB385114 BC056157 AB209862 U09117 BC050382 AK098690 AK127813 AK292324 NM_006225 TSC_hg19_v1_chr3_-_38071155	-88577	-	NM_001130964	-93392	-	AF035295 TSC_hg19_v1_chr3_-_38178569 CU677013 CU680144 DQ891298 DQ893346 DQ894482 AK303251 AB529164 BC014474 X12966 X14813 AK025138 AK293716 BC011977	18847	-	TSC_hg19_v1_chr3_-_38178570 BC025780	18903	-	TSC_hg19_v1_chr3_-_38178584 AK316551 AK301056 BC039837 BC000635 NM_001130410 NM_001607	18987	-	AB020522|DLEC1|9940|deleted in lung and esophageal cancer 1##BC129824|DLEC1|9940|deleted in lung and esophageal cancer 1##BC129825|DLEC1|9940|deleted in lung and esophageal cancer 1##BC171799|DLEC1|9940|deleted in lung and esophageal cancer 1##NM_007335|DLEC1|9940|deleted in lung and esophageal cancer 1##NM_007337|DLEC1|9940|deleted in lung and esophageal cancer 1##AK302803|DLEC1|9940|deleted in lung and esophageal cancer 1##AB425198|DLEC1|9940|deleted in lung and esophageal cancer 1##AB209862|PLCD1|5333|phospholipase C, delta 1##U09117|PLCD1|5333|phospholipase C, delta 1##BC050382|PLCD1|5333|phospholipase C, delta 1##AK098690|PLCD1|5333|phospholipase C, delta 1##AK127813|PLCD1|5333|phospholipase C, delta 1##AK292324|PLCD1|5333|phospholipase C, delta 1##NM_006225|PLCD1|5333|phospholipase C, delta 1##NM_001130964|PLCD1|5333|phospholipase C, delta 1##AF035295|ACAA1|30|acetyl-CoA acyltransferase 1##DQ891298|ACAA1|30|acetyl-CoA acyltransferase 1##DQ893346|ACAA1|30|acetyl-CoA acyltransferase 1##DQ894482|ACAA1|30|acetyl-CoA acyltransferase 1##AK303251|ACAA1|30|acetyl-CoA acyltransferase 1##BC014474|ACAA1|30|acetyl-CoA acyltransferase 1##X12966|ACAA1|30|acetyl-CoA acyltransferase 1##X14813|ACAA1|30|acetyl-CoA acyltransferase 1##AK025138|ACAA1|30|acetyl-CoA acyltransferase 1##AK293716|ACAA1|30|acetyl-CoA acyltransferase 1##BC011977|ACAA1|30|acetyl-CoA acyltransferase 1##BC025780|ACAA1|30|acetyl-CoA acyltransferase 1##AK316551|ACAA1|30|acetyl-CoA acyltransferase 1##AK301056|ACAA1|30|acetyl-CoA acyltransferase 1##BC039837|ACAA1|30|acetyl-CoA acyltransferase 1##BC000635|ACAA1|30|acetyl-CoA acyltransferase 1##NM_001130410|ACAA1|30|acetyl-CoA acyltransferase 1##NM_001607|ACAA1|30|acetyl-CoA acyltransferase 1	0.0	
chr1	205110876	205111008	reg1012033.p1	10.363	+	TSC_hg19_v1_chr1_-_205091144 NM_001193272 NM_001193273 NM_005057	-19795	-	AB527310 CU691040 DQ891205 DQ894388 BC075059 BC075060 AK290137 BC037284 AK296978 TSC_hg19_v1_chr1_-_205091104 X85134 BC053856	-19875	-	BC061592 AY359081 NM_203376 AK303432	-57355	-	TSC_hg19_v1_chr1_-_205180683 AB384485 AY208850 EU832787 GQ129280 BC072406 AK298011 BC117411 BC143603 BC053627	69731	-	TSC_hg19_v1_chr1_-_205180700 AY429674 BC060870 NM_015375 NM_199462	69777	-	TSC_hg19_v1_chr1_+_205197073 AB007950 NM_014858 AK131419	86141	+	NM_001193272|RBBP5|5929|retinoblastoma binding protein 5##NM_001193273|RBBP5|5929|retinoblastoma binding protein 5##NM_005057|RBBP5|5929|retinoblastoma binding protein 5##DQ891205|RBBP5|5929|retinoblastoma binding protein 5##DQ894388|RBBP5|5929|retinoblastoma binding protein 5##BC075059|RBBP5|5929|retinoblastoma binding protein 5##BC075060|RBBP5|5929|retinoblastoma binding protein 5##AK290137|RBBP5|5929|retinoblastoma binding protein 5##BC037284|RBBP5|5929|retinoblastoma binding protein 5##AK296978|RBBP5|5929|retinoblastoma binding protein 5##X85134|RBBP5|5929|retinoblastoma binding protein 5##BC053856|RBBP5|5929|retinoblastoma binding protein 5##BC061592|TMEM81|388730|transmembrane protein 81##AY359081|TMEM81|388730|transmembrane protein 81##NM_203376|TMEM81|388730|transmembrane protein 81##AK303432|TMEM81|388730|transmembrane protein 81##AY208850|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##EU832787|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##GQ129280|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC072406|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AK298011|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC117411|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC143603|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC053627|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AY429674|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC060870|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_015375|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_199462|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2	0.999838	CTCF.p2:6:1.000
chr6	85132233	85132359	reg1010100.p2	10.363	+	AB023226 AK308190 BC063632 NM_014895 TSC_hg19_v1_chr6_-_84937334	-194972	-	TSC_hg19_v1_chr6_+_84743459 AK090775 AX746611 NM_138409 BC010003 AK307078 AK292736 BC039855	-388890	+	TSC_hg19_v1_chr6_+_84569438 AB527313 AM393033	-562832	+	TSC_hg19_v1_chr6_-_85472330 AJ010278	340029	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	340874	-	HQ258462 NM_001080508 BC157841 BC132715	341629	-	AB023226|KIAA1009|22832|KIAA1009##AK308190|KIAA1009|22832|KIAA1009##BC063632|KIAA1009|22832|KIAA1009##NM_014895|KIAA1009|22832|KIAA1009##AK090775|MRAP2|112609|melanocortin 2 receptor accessory protein 2##NM_138409|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC010003|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK307078|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK292736|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC039855|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AM393033|CYB5R4|51167|cytochrome b5 reductase 4##AJ010278|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18##HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18	0.0	
chr9	90277927	90278038	reg1011008.p2	10.363	+	TSC_hg19_v1_chr9_+_90112781 NM_004938 X76104 BC003614 AK295119	-165114	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	-165396	+	AK127445 NM_001001709 BC132741 BC136791 HQ258059	-514381	+	NM_001912 NM_145918 TSC_hg19_v1_chr9_+_90341001	63011	+	AK075100 TSC_hg19_v1_chr9_+_90341022 BX648848	63040	+	AL832167 BX647102 BX647434 TSC_hg19_v1_chr9_+_90341033 BX537395 BX647101 BX647413 BX647435 BX648849 BX649140 X12451 AF304301 BC142983 AF217997	63058	+	NM_004938|DAPK1|1612|death-associated protein kinase 1##X76104|DAPK1|1612|death-associated protein kinase 1##AK295119|DAPK1|1612|death-associated protein kinase 1##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##NM_001912|CTSL1|1514|cathepsin L1##NM_145918|CTSL1|1514|cathepsin L1##AK075100|CTSL1|1514|cathepsin L1##BX648848|CTSL1|1514|cathepsin L1##AL832167|CTSL1|1514|cathepsin L1##BX647102|CTSL1|1514|cathepsin L1##BX647434|CTSL1|1514|cathepsin L1##BX537395|CTSL1|1514|cathepsin L1##BX647101|CTSL1|1514|cathepsin L1##BX647413|CTSL1|1514|cathepsin L1##BX647435|CTSL1|1514|cathepsin L1##BX648849|CTSL1|1514|cathepsin L1##BX649140|CTSL1|1514|cathepsin L1##X12451|CTSL1|1514|cathepsin L1##AF304301|CTSL1|1514|cathepsin L1##BC142983|CTSL1|1514|cathepsin L1##AF217997|CTSL1|1514|cathepsin L1	0.827448	CTCF.p2:5:0.827
chr6_ssto_hap7	4433466	4433594	reg1013530.p1	10.362	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.003703	CTCF.p2:14:0.960
chr11	1650152	1650269	reg1010254.p1	10.361	+	AB528165 AB126073 NM_001012709	-6865	-	AY597812 AB528164 AB126072 NM_001012708	-20557	-	AB528163 BC132882 BC132908 AJ628245 NM_001004325 AB126071	-30704	-	AB126074 AJ628247 NM_001001480	808	+	AB126075 NM_001012416 BC130399 BC133035	68228	+	TSC_hg19_v1_chr11_-_1769086 AK289574	118930	-	AB126073|KRTAP5-4|387267|keratin associated protein 5-4##NM_001012709|KRTAP5-4|387267|keratin associated protein 5-4##AY597812|KRTAP5-3|387266|keratin associated protein 5-3##AB126072|KRTAP5-3|387266|keratin associated protein 5-3##NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3##BC132882|KRTAP5-2|440021|keratin associated protein 5-2##BC132908|KRTAP5-2|440021|keratin associated protein 5-2##AJ628245|KRTAP5-2|440021|keratin associated protein 5-2##NM_001004325|KRTAP5-2|440021|keratin associated protein 5-2##AB126071|KRTAP5-2|440021|keratin associated protein 5-2##AB126074|KRTAP5-5|439915|keratin associated protein 5-5##AJ628247|KRTAP5-5|439915|keratin associated protein 5-5##NM_001001480|KRTAP5-5|439915|keratin associated protein 5-5##AB126075|KRTAP5-6|440023|keratin associated protein 5-6##NM_001012416|KRTAP5-6|440023|keratin associated protein 5-6##BC130399|KRTAP5-6|440023|keratin associated protein 5-6##BC133035|KRTAP5-6|440023|keratin associated protein 5-6##AK289574|IFITM10|402778|interferon induced transmembrane protein 10	0.0	
chr11	19098651	19098778	reg1010824.p1	10.361	+	BC063450 NM_054030	-16487	-	BC096835 NM_147199	-142168	-	AK294374 BC064807 AK316270 AK294673 BC039897 AK295604 AK090923 AX746685 AL832541 NM_001039970 NM_006906 NM_032781 TSC_hg19_v1_chr11_-_18813404	-285449	-	TSC_hg19_v1_chr11_+_19138714 BC050690 BC056152 NM_001001483 NM_019028 AB097014 AB097027 AK001714 BX648156 BC036020 AK291348 AB024495 CU691124	40003	+	U20324 U72899 U49837 BC057221 NM_001127656 TSC_hg19_v1_chr11_-_19223531 AK313289 NM_003476 AF121260	124844	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	163761	-	BC063450|MRGPRX2|117194|MAS-related GPR, member X2##NM_054030|MRGPRX2|117194|MAS-related GPR, member X2##BC096835|MRGPRX1|259249|MAS-related GPR, member X1##NM_147199|MRGPRX1|259249|MAS-related GPR, member X1##AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC050690|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BC056152|ZDHHC13|54503|zinc finger, DHHC-type containing 13##NM_001001483|ZDHHC13|54503|zinc finger, DHHC-type containing 13##NM_019028|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB097014|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB097027|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AK001714|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BX648156|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BC036020|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AK291348|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB024495|ZDHHC13|54503|zinc finger, DHHC-type containing 13##U20324|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U72899|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U49837|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##BC057221|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_001127656|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AK313289|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_003476|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AF121260|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8	0.980468	CTCF.p2:10:0.980
chr9	132862002	132862175	reg1009369.p2	10.361	+	TSC_hg19_v1_chr9_+_132816199 AK026244 AK225456 BC030147 AF376725 AX776003 BC110518 AK293092 AB385490 AB046844	-45872	+	TSC_hg19_v1_chr9_+_132816196 BC143655	-45897	+	BC039728 NM_001136557 NM_001136558 NM_020960	-46104	+	AK024651 TSC_hg19_v1_chr9_+_132897386	35276	+	TSC_hg19_v1_chr9_+_132934685 BC004856 NM_014286 AF134479 AF186409 X84048 AB463656	72725	+	NM_001128826	100783	+	AK026244|GPR107|57720|G protein-coupled receptor 107##AK225456|GPR107|57720|G protein-coupled receptor 107##BC030147|GPR107|57720|G protein-coupled receptor 107##AF376725|GPR107|57720|G protein-coupled receptor 107##BC110518|GPR107|57720|G protein-coupled receptor 107##AK293092|GPR107|57720|G protein-coupled receptor 107##AB046844|GPR107|57720|G protein-coupled receptor 107##BC143655|GPR107|57720|G protein-coupled receptor 107##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107##AK024651|GPR107|57720|G protein-coupled receptor 107##BC004856|NCS1|23413|neuronal calcium sensor 1##NM_014286|NCS1|23413|neuronal calcium sensor 1##AF134479|NCS1|23413|neuronal calcium sensor 1##AF186409|NCS1|23413|neuronal calcium sensor 1##X84048|NCS1|23413|neuronal calcium sensor 1##NM_001128826|NCS1|23413|neuronal calcium sensor 1	0.939377	CTCF.p2:39:0.939
chrX	115004378	115004558	reg1006736.p1	10.361	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-176600	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-207426	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-208862	+	BC003645 TSC_hg19_v1_chrX_-_115085443	80971	-	AK313927 NM_000686 X87723 U16957	297527	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	563299	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr14	105956108	105956224	reg1011703.p1	10.360	+	TSC_hg19_v1_chr14_+_105953533 AK098290 U09770 BC002738 DQ892958 DQ896205 BT007181 U58630	-2603	+	NM_001311	-2910	+	TSC_hg19_v1_chr14_+_105941158 BC034151 NM_001312 AK315757 U36190 BC034386 BC128101 D42123 BC000434 BC001931 DQ891382 DQ894559 AB528485 AK223251 BT019911	-15036	+	BX161477 NM_001198983	25	+	BX248038 NM_001134877	353	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	1470	+	AK098290|CRIP1|1396|cysteine-rich protein 1 (intestinal)##U09770|CRIP1|1396|cysteine-rich protein 1 (intestinal)##BC002738|CRIP1|1396|cysteine-rich protein 1 (intestinal)##DQ892958|CRIP1|1396|cysteine-rich protein 1 (intestinal)##DQ896205|CRIP1|1396|cysteine-rich protein 1 (intestinal)##BT007181|CRIP1|1396|cysteine-rich protein 1 (intestinal)##U58630|CRIP1|1396|cysteine-rich protein 1 (intestinal)##NM_001311|CRIP1|1396|cysteine-rich protein 1 (intestinal)##BC034151|CRIP2|1397|cysteine-rich protein 2##NM_001312|CRIP2|1397|cysteine-rich protein 2##AK315757|CRIP2|1397|cysteine-rich protein 2##U36190|CRIP2|1397|cysteine-rich protein 2##BC034386|CRIP2|1397|cysteine-rich protein 2##BC128101|CRIP2|1397|cysteine-rich protein 2##D42123|CRIP2|1397|cysteine-rich protein 2##BC000434|CRIP2|1397|cysteine-rich protein 2##BC001931|CRIP2|1397|cysteine-rich protein 2##DQ891382|CRIP2|1397|cysteine-rich protein 2##DQ894559|CRIP2|1397|cysteine-rich protein 2##AK223251|CRIP2|1397|cysteine-rich protein 2##BT019911|CRIP2|1397|cysteine-rich protein 2##BX161477|C14orf80|283643|chromosome 14 open reading frame 80##NM_001198983|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80	0.082705	
chr2	103089513	103089643	reg1012758.p1	10.360	+	AK300026 AF077346 NM_003853	-54378	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	-110470	+	BC012580 BC030975 NM_003856 AK291578 AB029084	-135847	+	CR627411 NM_001011552	183	+	BC136377 BC136378 BC035787 NM_003048 AF073299	146605	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	263755	-	AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein##AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein##NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1##BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##CR627411|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##NM_001011552|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##BC136377|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC136378|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC035787|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##NM_003048|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AF073299|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9	0.973339	CTCF.p2:-2:0.973
chr11	116706813	116706935	reg1009697.p1	10.359	+	TSC_hg19_v1_chr11_+_116700622 BC121081 BC134419 NM_000040 BC027977	-6250	+	HQ258218 HQ258399 BC113594 BC113596 BC074764 X13629 M13654 NM_000482 TSC_hg19_v1_chr11_-_116694025	-12908	-	AK292739 AK315229 AK308047 NM_001166598 NM_052968	-43754	-	X00566 TSC_hg19_v1_chr11_-_116708339 AX752114 AX752116 BC005380 NM_000039 AK292231 BC110286	1481	-	BC128511 BC128510 NM_025164 BC121188 TSC_hg19_v1_chr11_-_116969081	262159	-	TSC_hg19_v1_chr11_+_117015002 NM_001184746 NM_001184747 NM_001184748 NM_002572 AK292973 AK307366 BC000398 BC019301 BC039721 D63390 BC001774 DQ836738 DQ836739 DQ836740 DQ836741 DQ836742 DQ836743	308159	+	BC121081|APOC3|345|apolipoprotein C-III##BC134419|APOC3|345|apolipoprotein C-III##NM_000040|APOC3|345|apolipoprotein C-III##BC027977|APOC3|345|apolipoprotein C-III##HQ258218|APOA4|337|apolipoprotein A-IV##HQ258399|APOA4|337|apolipoprotein A-IV##BC113594|APOA4|337|apolipoprotein A-IV##BC113596|APOA4|337|apolipoprotein A-IV##BC074764|APOA4|337|apolipoprotein A-IV##X13629|APOA4|337|apolipoprotein A-IV##M13654|APOA4|337|apolipoprotein A-IV##NM_000482|APOA4|337|apolipoprotein A-IV##AK292739|APOA5|116519|apolipoprotein A-V##AK315229|APOA5|116519|apolipoprotein A-V##AK308047|APOA5|116519|apolipoprotein A-V##NM_001166598|APOA5|116519|apolipoprotein A-V##NM_052968|APOA5|116519|apolipoprotein A-V##X00566|APOA1|335|apolipoprotein A-I##BC005380|APOA1|335|apolipoprotein A-I##NM_000039|APOA1|335|apolipoprotein A-I##AK292231|APOA1|335|apolipoprotein A-I##BC110286|APOA1|335|apolipoprotein A-I##BC128511|SIK3|23387|SIK family kinase 3##BC128510|SIK3|23387|SIK family kinase 3##NM_025164|SIK3|23387|SIK family kinase 3##BC121188|SIK3|23387|SIK family kinase 3##NM_001184746|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184747|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184748|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_002572|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292973|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK307366|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC000398|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC019301|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC039721|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##D63390|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC001774|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836738|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836739|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836740|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836741|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836742|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836743|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)	0.953207	CTCF.p2:28:0.953
chr12	52269128	52269273	reg1013092.p1	10.359	+	AK129980 NM_001013690	-43500	-	NM_001177984 AF225988 FJ611941	-212626	+	TSC_hg19_v1_chr12_+_51985016 AB027567 NM_014191	-284183	+	AK125517 BC121152 NM_001130015 NM_182608 BC121153 AF517108 AF517109 BX537908 BX640656 BX647684 BX649168	12695	+	HM161905 TSC_hg19_v1_chr12_+_52300731 HM161906	31511	+	NM_000020 Z22533 TSC_hg19_v1_chr12_+_52301290 AK298493	32049	+	AK129980|FIGNL2|401720|fidgetin-like 2##NM_001013690|FIGNL2|401720|fidgetin-like 2##NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##AB027567|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##NM_014191|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##AK125517|ANKRD33|341405|ankyrin repeat domain 33##BC121152|ANKRD33|341405|ankyrin repeat domain 33##NM_001130015|ANKRD33|341405|ankyrin repeat domain 33##NM_182608|ANKRD33|341405|ankyrin repeat domain 33##BC121153|ANKRD33|341405|ankyrin repeat domain 33##AF517108|ANKRD33|341405|ankyrin repeat domain 33##AF517109|ANKRD33|341405|ankyrin repeat domain 33##BX537908|ANKRD33|341405|ankyrin repeat domain 33##BX640656|ANKRD33|341405|ankyrin repeat domain 33##BX647684|ANKRD33|341405|ankyrin repeat domain 33##BX649168|ANKRD33|341405|ankyrin repeat domain 33##HM161905|ACVRL1|94|activin A receptor type II-like 1##HM161906|ACVRL1|94|activin A receptor type II-like 1##NM_000020|ACVRL1|94|activin A receptor type II-like 1##Z22533|ACVRL1|94|activin A receptor type II-like 1##AK298493|ACVRL1|94|activin A receptor type II-like 1	0.966505	CTCF.p2:14:0.967
chr17	42245904	42246030	reg1011060.p1	10.359	+	TSC_hg19_v1_chr17_+_42219388 BC000121 AK021656	-26564	+	TSC_hg19_v1_chr17_+_42219306 AL834295	-26633	+	TSC_hg19_v1_chr17_+_42219297 NM_001171251 NM_024032 AK291924	-26701	+	AK054727 NM_080863 AK314595 TSC_hg19_v1_chr17_+_42248081 BC118584 BC118585 BC075088 AY557346	2148	+	TSC_hg19_v1_chr17_-_42264070 AK055685	18081	-	TSC_hg19_v1_chr17_-_42264076 NM_178542	18124	-	BC000121|C17orf53|78995|chromosome 17 open reading frame 53##AK021656|C17orf53|78995|chromosome 17 open reading frame 53##AL834295|C17orf53|78995|chromosome 17 open reading frame 53##NM_001171251|C17orf53|78995|chromosome 17 open reading frame 53##NM_024032|C17orf53|78995|chromosome 17 open reading frame 53##AK291924|C17orf53|78995|chromosome 17 open reading frame 53##AK054727|ASB16|92591|ankyrin repeat and SOCS box containing 16##NM_080863|ASB16|92591|ankyrin repeat and SOCS box containing 16##AK314595|ASB16|92591|ankyrin repeat and SOCS box containing 16##BC118584|ASB16|92591|ankyrin repeat and SOCS box containing 16##BC118585|ASB16|92591|ankyrin repeat and SOCS box containing 16##BC075088|ASB16|92591|ankyrin repeat and SOCS box containing 16##AY557346|ASB16|92591|ankyrin repeat and SOCS box containing 16##AK055685|C17orf65|339201|chromosome 17 open reading frame 65##NM_178542|C17orf65|339201|chromosome 17 open reading frame 65	0.582059	CTCF.p2:19:0.582
chr18	46705251	46705393	reg1012664.p1	10.359	+	AF010193 NM_001190821 NM_005904	-228242	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	-228555	-	AK301535 NM_001190822	-229620	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	281729	-	TSC_hg19_v1_chr18_-_47013575 AB097012	308243	-	TSC_hg19_v1_chr18_-_47013599 BC093004	308277	-	AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin##AB097012|C18orf32|497661|chromosome 18 open reading frame 32##BC093004|C18orf32|497661|chromosome 18 open reading frame 32	0.906072	CTCF.p2:15:0.906
chr10	62407111	62407229	reg1011954.p1	10.358	+	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	-74480	-	U13616 NM_020987	-257610	-	AK292927 AK092527 NM_001149	-506454	-	EU832293 EU832377 AK172736 BX537917 TSC_hg19_v1_chr10_-_62493273 BX648574	86007	-	TSC_hg19_v1_chr10_-_62493282 NM_001204403	86114	-	NM_001170406 AK295741 NM_001170407 NM_001786 NM_033379 X05360 Y00272 TSC_hg19_v1_chr10_+_62538235	130993	+	AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832293|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832377|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX537917|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX648574|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204403|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001170406|CDK1|983|cyclin-dependent kinase 1##AK295741|CDK1|983|cyclin-dependent kinase 1##NM_001170407|CDK1|983|cyclin-dependent kinase 1##NM_001786|CDK1|983|cyclin-dependent kinase 1##NM_033379|CDK1|983|cyclin-dependent kinase 1##X05360|CDK1|983|cyclin-dependent kinase 1##Y00272|CDK1|983|cyclin-dependent kinase 1	0.999616	CTCF.p2:-1:1.000
chr14	106734199	106734341	reg1012819.p1	10.358	+	AM279487 AF308557 Y17783 Y17784 HM774660 JN111012 AF103142 AY515002 HQ704054 JN110499 JN110977 JN111085 HM774129 HM774274 HM774585 HM774849 HQ704055 U21254 Y17140 AY050689 AY050700 AY392847 AY392855 AY393130 AY393134 AY393349 AY393375 AY393380 AY393622 AY393638 AY393642 AY393655 AY393684 AY393690 AY866668 DQ100948 AY393127 AF533986 AY866766 DQ926392 GU570247 AY866814 DQ100974 DQ926235 DQ926301 FJ039787 JN158459 AY944709 DQ535390 BC090939 AF062249 AF062286 AJ224083 GU179345 BC089421 BC066642 TSC_hg19_v1_chr14_-_106733637	-754	-	L14821 U19885 U42468 X56526 DQ001068 L28052 AF283793 AF283795 AF283796 AF283798 AF283799 AF283805 AJ519221 AJ519266 AJ519267 AJ519271 AJ519324 AJ519325 AJ519330 AJ519337 L26907 L33035 L08083 AF431049 X67909 L08090 AF062136 AF062184 AF062205 AF062260 AF062270 AF062276 AF062280 AF174012 AF174019 AF174024 AF174029 AJ131062 AY172959 L01276 L11699 L23931 L38433 M26994 M26995 M62731 M99595 S72729 U43754 X17677 X65895 X65900 X81726 X81731 X81732 X81748 X81755 Z11946 Z47213 Z47214 Z47217 Z47226 Z47232 CU677431 L08088 Z14202 M18513 X14584 AK128301 Z14205 Z14201 Z14200 BC069020 M34024 BC015760 M29470 BC078671 TSC_hg19_v1_chr14_-_106725734 AK130476 AK092803 AK097010 AK097950 AK098817 AK128533 AK129776 AK301393 AX747738 BX640947 M97920	-8592	-	AF267078 U64476 DQ523922 AF460679 AF460691 U64467 DQ454508 DQ523923 AY003727 DQ454426 DQ454615 GQ232878 GQ232903 GQ232925 GQ232927 GQ232947 EU814957 JF810265 AY003761 AF103273 GU552695 DQ454618 FJ874064 GQ232772 GQ232846 GU552694 GU552734 GU552752 AY003728 HM996533 AY003827 AY003856 GQ232877 GU552710 AY003715 AY003717 AY003738 AY003843 AY003847 AY003852 DQ454401 DQ454562 GQ232908 AY003766 GQ232777 GQ232859 GQ232872 GQ232923 GU552704 GU552708 GU552718 GU552741 GU552742 GU552746 GU552748 GU552758 GU552759 DQ454687 DQ454876 DQ523884 DQ454518 FJ840380 FJ840175 FJ840178 FJ840222 FJ873867 Z11945 AY003806 DQ454747 FJ839967 FJ839989 FJ840090 FJ840195 FJ840312 FJ840319 FJ840320 FJ840327 FJ840338 FJ840391 FJ873815 FJ873824 FJ873849 FJ873872 FJ873885 FJ873902 FJ873910 FJ873913 FJ873916 FJ873922 FJ873935 FJ873946 FJ873974 FJ873975 FJ874010 FJ874023 FJ874034 FJ874046 FJ874048 FJ874074 FJ874087 GQ504854 HM116131 HM116209 HM116214 AF103210 AJ008183 AJ008196 AJ008214 AJ008241 DQ454767 AY003815 AY003870 AY003737 AY003774 AY003778 AY003820 DQ454753 EU433871 EU433883 GQ504883 HM996150 AY003857 GQ504910 AF103115 EU099172 EU099195 EU099110 AJ132560 AJ132561 AJ132562 AJ132563 EU099182 EU099264 AJ010334 DQ454751 EU099225 EU099256 HM996312 AY206990 DQ523924 DQ524170 GQ504968 TSC_hg19_v1_chr14_-_106725449 AM183988 AM183989 AM183991 AM279574 GQ232938 HQ703990 AF103328 AF103356 AF103073 AF103150 AF103286 AF103290 AF103371 HM774572 GQ504879 GQ504884 GQ504947 JN111000 AF103035 EU146335 AF103352 AF103353 AF103049 GQ504964 JN110538 JN110631 JN110645 JN110650 JN110677 JN110696 JN110699 JN110787 L03816 L03817 L03818 L03819 L04342 AF103198 AY062298 FJ385357 FJ385358 GQ504851 GQ504868 GQ504870 GQ504875 GQ504878 GQ504881 GQ504888 GQ504889 GQ504890 GQ504895 GQ504903 GQ504923 GQ504924 GQ504933 GQ504937 GQ504946 GQ504950 GQ504972 GQ504974 GQ504976 GQ504978 GQ504983 GQ504985 GQ504987 GQ504988 HM773970 HM773998 HM774045 HM774098 HM774232 HM774297 HM774352 HM774364 HM774372 HM774385 HM774431 HM774434 HM774459 HM774503 HM774582 HM774648 HM774689 HM774750 HM774890 HM774978 HQ703998 HQ703999 HQ704017 HQ704042 L26906 L33031 AF103369 AF103154 AF103366 AF165104 U41571 AF103321 AF103335 AJ008250 AY099259 EU146323 EU146326 EU146327 EU146329 EU146332 EU146342 EU146374 EU146387 X93001 X93003 Y18120 DQ100810 DQ100879 AJ271551 AJ271557 AJ272334 AJ298607 AJ300784 AY423185 DQ100843 L02256 L02262 L02264 L02266 L02268 L02269 AF001424 AF471287 AF485441 AF485447 AJ241351 AY422534 AY423163 AY646422 HM995130 L19917 AF485437 AF485457 AF485473 AJ006648 AJ300780 AY423180 L19903 L19920 U21262 U21272 AF103148 AY062299 HM995230 HM996491 AF062191 DQ100915 HM995048 AY062297 FN563767 X81742 AF098362 AY640484 U00525 X79164 AF062289 AF062297 AF062298 AF062301 AF062304 AF062307 AY866624 AY941927 AY971138 DQ100817 DQ524115 DQ926052 DQ926056 DQ926057 DQ926276 DQ926278 EF633810 EF633827 HM994987 HM994988 HM995202 HM995232 HM995233 HM995238 HM995242 HM995243 HM995256 HM995257 HM995259 HM995260 HM995261 HM995262 HM995263 HM995264 HM995266 HM995390 HM995391 HM995393 HM995422 HM995434 HM995436 HM995437 HM995438 HM995451 HM995466 HM995568 HM995590 HM995620 HM995822 HM995931 HM995959 HM996082 HM996159 HM996219 HM996232 Z98720 Z98721 AJ245230 AJ555259 DQ005303 DQ840756 Z96968 Z98718 AB027439 AB067177 AB087877 AF004323 AF174111 AJ233694 AJ308450 AJ508767 AY686918 AY781826 AY781828 AY866718 AY944694 AY944710 AY944718 DQ005292 DQ065685 DQ100684 DQ100710 DQ100713 DQ100794 DQ100838 DQ100851 DQ100860 DQ100890 DQ100975 DQ431645 DQ926026 DQ926027 DQ926030 DQ926044 DQ926045 DQ926046 DQ926047 DQ926048 DQ926076 DQ926128 DQ926134 DQ926185 DQ926288 DQ926298 DQ926358 DQ926375 DQ926580 DQ926584 EF177967 EF178003 EF178031 EF178096 EF178104 EF178138 EF633826 FJ385282 FJ385309 FJ385317 FJ385389 GU570312 HM995971 HQ129860 HQ378370 L19915 L19916 L19919 L43083 L43085 L48237 U21259 U58144 Y09384 Y09386 Y09388 AB021519 AB021521 AB021523 AB021526 AB021530 AB021533 AB021534 AB021536 AB021541 AB063654 AB063664 AB063672 AB063675 AB063799 AB063807 AB063811 AB063824 AB063849 AB063887 AB063890 AB066894 AB066973 AB066977 AB067077 AB067081 AB067095 AB067102 AB067124 AB067240 AB067250 AB067252 AB067259 AB067260 AB288084 AB585999 AF004322 AF004324 AF015123 AF015125 AF015126 AF015128 AF015129 AF015130 AF015132 AF015133 AF015134 AF015135 AF021986 AF022011 AF052520 AF052522 AF052524 AF062167 AF062251 AF115107 AF115108 AF115109 AF115110 AF123351 AF123354 AF123355 AF123356 AF123357 AF123358 AF123359 AF123360 AF123361 AF123363 AF123364 AF123365 AF123366 AF123367 AF123368 AF123369 AF123370 AF123371 AF123372 AF123373 AF123374 AF123375 AF123376 AF123377 AF123378 AF123379 AF174038 AF174057 AF174067 AF174077 AF174083 AF174089 AF174098 AF174101 AF174103 AF174105 AF231394 AF231395 AF231396 AF231397 AF231398 AF231399 AF231400 AF231402 AF231403 AF302822 AF396474 AF396476 AF442756 AF455924 AF471288 AF471289 AF471294 AF471317 AF471318 AF471321 AF471325 AF471326 AF471330 AF471331 AF471339 AF471349 AF471350 AF471358 AF471359 AF471369 AF471370 AF471371 AF471372 AF471375 AF471376 AF471384 AF471387 AJ006111 AJ006114 AJ006115 AJ006116 AJ006117 AJ006118 AJ006119 AJ006120 AJ239348 AJ239354 AJ239367 AJ239378 AJ243110 AJ245229 AJ249630 AJ271555 AJ276097 AJ298606 AJ298608 AJ298609 AJ298610 AJ298611 AJ300789 AJ300794 AJ313386 AJ414026 AJ519289 AJ519297 AJ555256 AJ555270 AJ579095 AJ579100 AJ579106 AJ579108 AJ579113 AJ579142 AJ579157 AJ579159 AJ579181 AJ579184 AJ579188 AJ579195 AJ579196 AJ579221 AJ579225 AJ579226 AJ579228 AJ579236 AJ579238 AJ579261 AJ579264 AJ579267 AJ579270 AJ579271 AJ579272 AJ579274 AJ579277 AJ579278 AJ579280 AJ579283 AJ617570 AJ627233 AJ627234 AJ627240 AJ627250 AM259136 AM259140 AM279605 AY033252 AY033255 AY055484 AY263417 AY263418 AY345920 AY376120 AY506559 AY554180 AY577295 AY640513 AY640540 AY686868 AY686874 AY781824 AY781873 AY789123 AY789125 AY789442 AY846269 AY866781 AY866785 AY866788 AY880990 AY885173 AY927662 AY941888 AY941899 AY941902 AY941930 AY941947 AY944688 AY944707 AY971091 AY971124 D83687 D83693 DQ065632 DQ065707 DQ100700 DQ100717 DQ100842 DQ212496 DQ212498 DQ212500 DQ328862 DQ379475 DQ535280 DQ535283 DQ535297 DQ535299 DQ535303 DQ535312 DQ535317 DQ535318 DQ535343 DQ535368 DQ535376 DQ535380 DQ535400 DQ535446 DQ535463 DQ535471 DQ535477 DQ535481 DQ926151 DQ926157 DQ926210 DQ926214 DQ926215 DQ926279 DQ926353 DQ926370 DQ926380 DQ926441 DQ926551 DQ926579 EF178054 EF633771 EF633773 EF633774 EF633775 EF633776 EF633777 EF633778 EF633822 EF633828 FJ385277 FJ385291 FJ385311 FJ385361 FJ385380 FJ385384 FJ481090 FJ492915 FJ492944 FN562944 FN562945 FN562946 FN562947 FN562948 FN562949 FN562950 FN562951 FN562952 FN562953 FN562954 FN562955 FN562956 FN562957 FN562958 FN562959 FN562960 FN562961 FN562962 FN562963 FN562964 FN562965 FN562966 FN562967 FN562968 FN563753 FN563754 FN563755 FN563756 FN563757 FN563758 FN563759 FN563760 FN563761 FN563763 FN563764 FN563770 FN563773 FN563774 FN563775 FN563776 FN563777 FN563778 FN563779 FN563782 FN563783 FN563787 FN563788 FN563790 FN563791 FN563792 FN563793 FN563794 FN563796 FN563797 FN563799 FN563801 FN563804 FN563806 FN563808 FN563809 FN563810 FN563815 FN563816 FN563819 FN563820 FN563821 FN563822 FN563823 FN563824 FN563825 FN563826 FN563827 FN563828 GU570309 GU570311 GU570316 GU570317 GU570318 GU570319 GU570322 GU570340 HM152515 HM152523 HQ129862 HQ689770 L12188 L14822 L25292 L34164 M17746 M17747 M17748 M17749 M57940 M57941 M57942 M57943 M57944 M87268 S55094 S67717 U00491 U00495 U00509 U00510 U00521 U00536 U00537 U00541 U00549 U07986 U27187 U38588 U64486 U76685 U77373 U82257 U93176 U95236 U95237 U96286 U97242 X62955 X62956 X62957 X62962 X62963 X62964 X62971 X69692 X98751 X99363 X99365 Z33900 Z33903 Z46382 Z74668 Z96954 Z96955 Z96956 Z96958 Z96967 Z96975 Z98714 Z98715 Z98716 Z98717 Z98719 Z98723 Z98725 AJ519288 AJ519312 S73957 X81746 AJ519239 AJ519328 AJ519258 AJ519219 AJ519235 AJ519237 AJ519238 AJ519240 AJ519244 AJ519248 AJ519252 AJ519257 AJ519259 AJ519263 AJ519264 AJ519265 AJ519269 AJ519272 AJ519273 AJ519276 AJ519277 AJ519283 AJ519285 AJ519286 AJ519290 AJ519291 AJ519296 AJ519300 AJ519301 AJ519302 AJ519303 AJ519307 AJ519314 AJ519316 AJ519317 AJ519318 AJ519319 AJ519320 AJ519321 AJ519322 AJ519326 AJ519327 AJ519329 AJ519331 AJ519333 AJ519334 AJ519336 AJ519338 AJ519339 HM995767 HM995894 HM995896 HM995906	-8901	-	AY393053 S85238 TSC_hg19_v1_chr14_-_106746153	11835	-	AJ305231 DQ118259 HM774835 DQ926094 AY866678 EU794438 Z80845 BC087841 TSC_hg19_v1_chr14_-_106774560	40165	-	U32154 AF460767 DQ524080 DQ454738 Y08403 HM774396 AF103161 AJ245070 AY866645 AM233757 AY670731 DQ005273 AB063909 AB363132 AJ556745 AY670715 AY670719 AY670726 AY670727 AY670745 AY670770 AY670773 AY670784 AY670819 AY670831 AY670837 AY670857 AY671081 AY671102 AY671324 AY671379 AY671400 AY671500 AY671586 AY671639 AY671641 AY671703 AY671775 AY671785 AY781815 AY781827 AY866636 DQ065711 DQ926028 DQ926188 DQ926206 FJ492934 AJ430733 EF178114 FJ385294 HM152518 AY392953 L28053 AY671012 AY671034 AY671045 AY671152 AY671174 AY671714 AY671721 L03677 Z75396 Z75404 L23570 BC073765 AK130813 AK301332 AK130585 AK128579 AK128568 AK129620 TSC_hg19_v1_chr14_-_106781004	46500	-	BC090939|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089421|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC066642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AY172959|IGHV4-31|28396|immunoglobulin heavy variable 4-31##X14584|IGHV3-23|28442|immunoglobulin heavy variable 3-23##AK128301|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC069020|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC015760|IGHM|3507|immunoglobulin heavy constant mu##BC078671|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092803|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097010|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097950|IGHM|3507|immunoglobulin heavy constant mu##AK098817|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129776|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640947|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AF103353|IGK@|50802|immunoglobulin kappa locus##AB087877|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##AF231396|IGHV3-23|28442|immunoglobulin heavy variable 3-23##AJ006111|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006114|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006115|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006117|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006118|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006119|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006120|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ519334|IGHV3-23|28442|immunoglobulin heavy variable 3-23##BC087841|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073765|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK130813|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130585|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128568|IGHD|3495|immunoglobulin heavy constant delta##AK129620|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.50526	CTCF.p2:18:0.505
chr2	231577365	231577531	reg1007822.p2	10.358	+	AK091898 NM_001206704	-295978	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-296492	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-296529	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	98	+	TSC_hg19_v1_chr2_+_231577633 BC020570	196	+	AK292382 NM_001130849 NM_001130850 AK315692	830	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.171328	
chr9	126147792	126147901	reg1009581.p1	10.357	+	NM_173689 AK123000 DQ426866 AY720432	-29353	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-116958	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	-117026	-	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	544465	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	626037	+	TSC_hg19_v1_chr9_+_126774046 BC034458	626225	+	NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC034458|LHX2|9355|LIM homeobox 2	0.970683	CTCF.p2:-3:0.971
chr1	87550011	87550172	reg1011531.p1	10.356	+	AB007917 TSC_hg19_v1_chr1_+_87380462	-169634	+	TSC_hg19_v1_chr1_+_87380374 BC025384 BC025990 NM_001134492 NM_012262 AK023260 AB024568 BC108735	-169738	+	TSC_hg19_v1_chr1_-_87380011 NM_004261 NM_203341	-170034	-	TSC_hg19_v1_chr1_+_87595568 BC030523	45458	+	NM_006769 U24576 TSC_hg19_v1_chr1_+_87794164	244066	+	AK292578 TSC_hg19_v1_chr1_+_87794564	244468	+	AB007917|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025384|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025990|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_001134492|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_012262|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AK023260|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AB024568|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC108735|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_004261|SEP15|9403|15 kDa selenoprotein##NM_203341|SEP15|9403|15 kDa selenoprotein##BC030523|LOC339524|339524|uncharacterized LOC339524##NM_006769|LMO4|8543|LIM domain only 4##U24576|LMO4|8543|LIM domain only 4##AK292578|LMO4|8543|LIM domain only 4	0.997789	CTCF.p2:40:0.998
chr11	72284545	72284639	reg1007645.p1	10.355	+	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	-138942	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	-139016	-	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	-139137	-	TSC_hg19_v1_chr11_-_72353458 AY495089 AK131525 AK092278 AX747449 NM_001143839 NM_001243784	68887	-	AY495087 NM_001146209	95515	-	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	100861	-	AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK131525|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK092278|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001143839|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001243784|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	0.881523	CTCF.p2:-11:0.882
chr1	205323552	205323650	reg1011086.p1	10.355	+	BC036076 TSC_hg19_v1_chr1_-_205313311	-10291	-	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	-32758	-	AY358192 TSC_hg19_v1_chr1_+_205236667	-86967	+	AK299227 AK001610 NM_018203 AK096590	2439	-	AB084764 AB084765 AB085610 AB096677 AB096678 AB096679 AB096680 AB096681 AB096682 BC036636 AK302392 NM_001001552 NM_001199050 NM_001199051 NM_001199052	67595	-	NM_002596 NM_212502 NM_212503 TSC_hg19_v1_chr1_+_205473688 AK293756 AK296320 AK295654	150104	+	BC036076|KLHDC8A|55220|kelch domain containing 8A##AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A##AB084764|LEMD1|93273|LEM domain containing 1##AB084765|LEMD1|93273|LEM domain containing 1##AB085610|LEMD1|93273|LEM domain containing 1##AB096677|LEMD1|93273|LEM domain containing 1##AB096678|LEMD1|93273|LEM domain containing 1##AB096679|LEMD1|93273|LEM domain containing 1##AB096680|LEMD1|93273|LEM domain containing 1##AB096681|LEMD1|93273|LEM domain containing 1##AB096682|LEMD1|93273|LEM domain containing 1##BC036636|LEMD1|93273|LEM domain containing 1##AK302392|LEMD1|93273|LEM domain containing 1##NM_001001552|LEMD1|93273|LEM domain containing 1##NM_001199050|LEMD1|93273|LEM domain containing 1##NM_001199051|LEMD1|93273|LEM domain containing 1##NM_001199052|LEMD1|93273|LEM domain containing 1##NM_002596|CDK18|5129|cyclin-dependent kinase 18##NM_212502|CDK18|5129|cyclin-dependent kinase 18##NM_212503|CDK18|5129|cyclin-dependent kinase 18##AK293756|CDK18|5129|cyclin-dependent kinase 18##AK296320|CDK18|5129|cyclin-dependent kinase 18##AK295654|CDK18|5129|cyclin-dependent kinase 18	0.997469	CTCF.p2:1:0.997
chr8	17722194	17722302	reg1011160.p1	10.355	+	TSC_hg19_v1_chr8_-_17658748 FJ458440	-63507	-	AY363099 AK310871 NM_001001924 NM_001001925 FJ458441 TSC_hg19_v1_chr8_-_17658604	-63753	-	AK294860 NM_001166393	-142195	-	BT006635 CU675515 D87342 TSC_hg19_v1_chr8_-_17743179	20872	-	AF042354 AF168954 NM_147203 NM_201553 AX772838 TSC_hg19_v1_chr8_-_17753015 D14446 AK225619 AK289448 AK225616 BC007047 NM_004467 NM_201552	30698	-	TSC_hg19_v1_chr8_-_17767878 BC073919	45632	-	AY363099|MTUS1|57509|microtubule associated tumor suppressor 1##AK310871|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001001924|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001001925|MTUS1|57509|microtubule associated tumor suppressor 1##FJ458441|MTUS1|57509|microtubule associated tumor suppressor 1##AK294860|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1##BT006635|FGL1|2267|fibrinogen-like 1##D87342|FGL1|2267|fibrinogen-like 1##AF042354|FGL1|2267|fibrinogen-like 1##AF168954|FGL1|2267|fibrinogen-like 1##NM_147203|FGL1|2267|fibrinogen-like 1##NM_201553|FGL1|2267|fibrinogen-like 1##AX772838|FGL1|2267|fibrinogen-like 1##D14446|FGL1|2267|fibrinogen-like 1##AK225619|FGL1|2267|fibrinogen-like 1##AK289448|FGL1|2267|fibrinogen-like 1##AK225616|FGL1|2267|fibrinogen-like 1##BC007047|FGL1|2267|fibrinogen-like 1##NM_004467|FGL1|2267|fibrinogen-like 1##NM_201552|FGL1|2267|fibrinogen-like 1	0.910938	CTCF.p2:14:0.911
chr9	116569793	116569898	reg1009732.p1	10.355	+	TSC_hg19_v1_chr9_+_116356408 BC018072 BC019039 CU676160	-213364	+	AF490838 NM_144489 AK054584	-213635	+	U27655 AK125094 TSC_hg19_v1_chr9_+_116343207	-226657	+	TSC_hg19_v1_chr9_+_116638585 BC036039 NM_133374 BC136287 BC143826 AK126896 BC053892	68754	+	TSC_hg19_v1_chr9_-_116840540 CU692002 AB463406 X04494	270655	-	TSC_hg19_v1_chr9_-_116840546 AY544123	270702	-	BC018072|RGS3|5998|regulator of G-protein signaling 3##BC019039|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3##U27655|RGS3|5998|regulator of G-protein signaling 3##AK125094|RGS3|5998|regulator of G-protein signaling 3##BC036039|ZNF618|114991|zinc finger protein 618##NM_133374|ZNF618|114991|zinc finger protein 618##BC136287|ZNF618|114991|zinc finger protein 618##BC143826|ZNF618|114991|zinc finger protein 618##AK126896|ZNF618|114991|zinc finger protein 618##BC053892|ZNF618|114991|zinc finger protein 618##X04494|AMBP|259|alpha-1-microglobulin/bikunin precursor##AY544123|AMBP|259|alpha-1-microglobulin/bikunin precursor	0.999603	CTCF.p2:0:1.000
chr2	110647591	110647712	reg1011131.p1	10.354	+	NM_005054 U64675	-95686	+	AL136868 NM_001037866 NM_001123363 NM_032260	-97317	+	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	-275706	+	BC094740 NM_001205288 NM_033514	8357	+	U17077 AB590150 DQ892870 DQ896118 TSC_hg19_v1_chr2_-_110873397 BC003179	225754	-	TSC_hg19_v1_chr2_-_110873536 AK311353	225914	-	NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##U17077|MALL|7851|mal, T-cell differentiation protein-like##DQ892870|MALL|7851|mal, T-cell differentiation protein-like##DQ896118|MALL|7851|mal, T-cell differentiation protein-like##BC003179|MALL|7851|mal, T-cell differentiation protein-like##AK311353|MALL|7851|mal, T-cell differentiation protein-like	0.359202	CTCF.p2:-10:0.359
chr3	12180885	12181000	reg1010877.p2	10.354	+	TSC_hg19_v1_chr3_+_12045861 NM_003178 NM_133625 AK094464 BC051307 AB209088 U40215 AF077671 AF077737	-135039	+	EU832515 EU832596 AK295839 TSC_hg19_v1_chr3_-_11888358 AK310993 BC015088 NM_138807 AK092776 AX747723 AK309733 AK303598	-292683	-	TSC_hg19_v1_chr3_-_11762012 D50911 BC001514 AK130542 BC000763 BC003038 NM_014667	-418827	-	BT019627 CU679743 DQ891795 DQ894978 U76456 TSC_hg19_v1_chr3_-_12200413 AK313018	19437	-	BC010553 NM_003256	19908	-	TSC_hg19_v1_chr3_+_12329422 NM_005037 NM_138712 X90563 AK290581	148514	+	NM_003178|SYN2|6854|synapsin II##NM_133625|SYN2|6854|synapsin II##AK094464|SYN2|6854|synapsin II##BC051307|SYN2|6854|synapsin II##AB209088|SYN2|6854|synapsin II##U40215|SYN2|6854|synapsin II##AF077671|SYN2|6854|synapsin II##AF077737|SYN2|6854|synapsin II##EU832515|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##EU832596|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK295839|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK310993|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##BC015088|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_138807|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK092776|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK309733|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK303598|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##D50911|VGLL4|9686|vestigial like 4 (Drosophila)##BC001514|VGLL4|9686|vestigial like 4 (Drosophila)##AK130542|VGLL4|9686|vestigial like 4 (Drosophila)##BC000763|VGLL4|9686|vestigial like 4 (Drosophila)##BC003038|VGLL4|9686|vestigial like 4 (Drosophila)##NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)##BT019627|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ891795|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ894978|TIMP4|7079|TIMP metallopeptidase inhibitor 4##U76456|TIMP4|7079|TIMP metallopeptidase inhibitor 4##AK313018|TIMP4|7079|TIMP metallopeptidase inhibitor 4##BC010553|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_003256|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_005037|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138712|PPARG|5468|peroxisome proliferator-activated receptor gamma##X90563|PPARG|5468|peroxisome proliferator-activated receptor gamma##AK290581|PPARG|5468|peroxisome proliferator-activated receptor gamma	0.48103	CTCF.p2:-21:0.481
chr22	17652461	17652582	reg1007927.p1	10.353	+	AF273270 NM_017829	-6345	-	TSC_hg19_v1_chr22_+_17640246 AF307448	-12257	+	NM_033070 TSC_hg19_v1_chr22_-_17640168	-12342	-	TSC_hg19_v1_chr22_-_17680487 AK027682 AK074702 NM_177405	27993	-	AF190746 NM_017424	38257	-	AK314321 TSC_hg19_v1_chr22_-_17700267 AK295174 AK292689	47842	-	AF273270|CECR5|27440|cat eye syndrome chromosome region, candidate 5##NM_017829|CECR5|27440|cat eye syndrome chromosome region, candidate 5##AF307448|CECR5-AS1|100130717|CECR5 antisense RNA 1 (non-protein coding)##NM_033070|CECR5|27440|cat eye syndrome chromosome region, candidate 5##AK027682|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK074702|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_177405|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF190746|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_017424|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK314321|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK295174|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK292689|CECR1|51816|cat eye syndrome chromosome region, candidate 1	0.998936	CTCF.p2:-12:0.999
chr6	25720785	25720907	reg1012245.p1	10.353	+	AK289477 NM_006998 BC000336 BC003036 Y16752	-68423	+	TSC_hg19_v1_chr6_-_25571218 Y10205	-149588	-	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	-440952	+	CU687518 BC062211 NM_170745	5925	-	AK312055 AB590704 BC066238 BC066239 BC066240 BC066241 BC066242 BC066243 NM_170610	6224	+	AK024903 NM_005495 TSC_hg19_v1_chr6_+_25754969 AK293354	34103	+	AK289477|SCGN|10590|secretagogin, EF-hand calcium binding protein##NM_006998|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC000336|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC003036|SCGN|10590|secretagogin, EF-hand calcium binding protein##Y16752|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A##BC062211|HIST1H2AA|221613|histone cluster 1, H2aa##NM_170745|HIST1H2AA|221613|histone cluster 1, H2aa##AK312055|HIST1H2BA|255626|histone cluster 1, H2ba##BC066238|HIST1H2BA|255626|histone cluster 1, H2ba##BC066239|HIST1H2BA|255626|histone cluster 1, H2ba##BC066240|HIST1H2BA|255626|histone cluster 1, H2ba##BC066241|HIST1H2BA|255626|histone cluster 1, H2ba##BC066242|HIST1H2BA|255626|histone cluster 1, H2ba##BC066243|HIST1H2BA|255626|histone cluster 1, H2ba##NM_170610|HIST1H2BA|255626|histone cluster 1, H2ba##AK024903|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4##NM_005495|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4##AK293354|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4	0.0	
chr11	2173311	2173432	reg1005253.p2	10.352	+	TSC_hg19_v1_chr11_-_2170792 DQ104203 NM_001007139	-2559	-	NM_001127598 TSC_hg19_v1_chr11_-_2162493	-10910	-	TSC_hg19_v1_chr11_-_2162174 HM481219 HM481220	-11171	-	AY899304 X70508 BC005255 DQ104204 DQ104205 NM_000207 NM_001042376 NM_001185097 NM_001185098	9052	-	M20911 M20912 AB591012 DQ677336 DQ677337 M17589 Y00414 M24790 NM_000360 NM_199292 NM_199293 X05290 BC143611 BC104967 BC143614	19689	-	TSC_hg19_v1_chr11_-_2291819 BC057801 BC136561 BC136567	118486	-	DQ104203|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##NM_001007139|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##NM_001127598|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##HM481219|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##HM481220|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##AY899304|INS|3630|insulin##X70508|INS|3630|insulin##BC005255|INS|3630|insulin##DQ104204|INS-IGF2|723961|INS-IGF2 readthrough##DQ104205|INS-IGF2|723961|INS-IGF2 readthrough##NM_000207|INS|3630|insulin##NM_001042376|INS-IGF2|723961|INS-IGF2 readthrough##NM_001185097|INS|3630|insulin##NM_001185098|INS|3630|insulin##M20911|TH|7054|tyrosine hydroxylase##M20912|TH|7054|tyrosine hydroxylase##DQ677336|TH|7054|tyrosine hydroxylase##DQ677337|TH|7054|tyrosine hydroxylase##M17589|TH|7054|tyrosine hydroxylase##Y00414|TH|7054|tyrosine hydroxylase##M24790|TH|7054|tyrosine hydroxylase##NM_000360|TH|7054|tyrosine hydroxylase##NM_199292|TH|7054|tyrosine hydroxylase##NM_199293|TH|7054|tyrosine hydroxylase##X05290|TH|7054|tyrosine hydroxylase##BC143611|TH|7054|tyrosine hydroxylase##BC104967|TH|7054|tyrosine hydroxylase##BC143614|TH|7054|tyrosine hydroxylase##BC057801|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136561|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136567|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)	0.124172	
chr15	67155307	67155408	reg1009742.p1	10.352	+	NM_001142861 U59914	-154428	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	-159798	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	-160683	+	TSC_hg19_v1_chr15_+_67358179 AK290881	202818	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	203044	+	NM_001145102 AK316017	262766	+	NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##AK290881|SMAD3|4088|SMAD family member 3##NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3	0.964922	CTCF.p2:-1:0.965
chr8	146245534	146245657	reg1012987.p1	10.352	+	BC065734 TSC_hg19_v1_chr8_-_146228282 AK296398	-17323	-	TSC_hg19_v1_chr8_-_146228237 AK021796 AK294723	-17365	-	AK128723 TSC_hg19_v1_chr8_-_146202735	-42863	-	TSC_hg19_v1_chr8_+_146277823 NM_023080 AK024642	32212	+	TSC_hg19_v1_chr8_+_146277852 BX648996 BC010001 CR457330	32305	+	None	None	None	BC065734|ZNF252|286101|zinc finger protein 252##AK296398|ZNF252|286101|zinc finger protein 252##AK294723|ZNF252|286101|zinc finger protein 252##AK128723|ZNF252|286101|zinc finger protein 252##NM_023080|C8orf33|65265|chromosome 8 open reading frame 33##AK024642|C8orf33|65265|chromosome 8 open reading frame 33##BX648996|C8orf33|65265|chromosome 8 open reading frame 33##BC010001|C8orf33|65265|chromosome 8 open reading frame 33##CR457330|C8orf33|65265|chromosome 8 open reading frame 33	0.743859	CTCF.p2:-21:0.744
chr2	161920313	161920456	reg1012226.p1	10.351	+	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	-570067	-	CU676342 D28482 X77494 AK225887 L11289 TSC_hg19_v1_chr2_-_161350025 AK309949 BC012992 BC012993 AK297812	-570425	-	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	-790195	-	NM_004180 NM_133484 U59863 U63830	73081	+	TSC_hg19_v1_chr2_+_162016938 AK313096 NM_001199135 BC067779	96565	+	NM_005805 TSC_hg19_v1_chr2_+_162164936 BC066336	244478	+	BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_004180|TANK|10010|TRAF family member-associated NFKB activator##NM_133484|TANK|10010|TRAF family member-associated NFKB activator##U59863|TANK|10010|TRAF family member-associated NFKB activator##U63830|TANK|10010|TRAF family member-associated NFKB activator##AK313096|TANK|10010|TRAF family member-associated NFKB activator##NM_001199135|TANK|10010|TRAF family member-associated NFKB activator##BC067779|TANK|10010|TRAF family member-associated NFKB activator##NM_005805|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##BC066336|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14	0.014856	
chr12	16775395	16775528	reg1013370.p1	10.350	+	AF258348 BC017777 AB044746 AK095595 AK308826 NM_001001395 NM_001243609	-14420	-	AK308594 AK294909 NM_001243613	-15450	-	BC050085 NM_001243610	-15728	-	AK026308 BC042888 NM_024730	1467621	-	NM_004570	1639012	+	AF532185 NM_033123 AK314516 AY035866 AK292279	2115492	-	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC050085|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243610|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK026308|RERGL|79785|RERG/RAS-like##BC042888|RERGL|79785|RERG/RAS-like##NM_024730|RERGL|79785|RERG/RAS-like##NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1	0.043432	
chr2	46220658	46220799	reg1012930.p1	10.350	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-341654	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-382321	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-425600	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	303863	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	304247	+	NM_001145051	485975	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.954572	CTCF.p2:1:0.955
chr10	81928968	81929085	reg1012270.p1	10.349	+	TSC_hg19_v1_chr10_+_81892497 HQ258029 EU446996	-36521	+	BC117332 BC117334 TSC_hg19_v1_chr10_+_81892485	-36569	+	BC066348 BC090922 NM_001012973	-36769	+	BC007564 TSC_hg19_v1_chr10_-_81965258 L19605 AB209770	36167	-	TSC_hg19_v1_chr10_-_81965287 AK298362	36255	-	TSC_hg19_v1_chr10_-_81965288 AK222918	36263	-	HQ258029|PLAC9|219348|placenta-specific 9##EU446996|PLAC9|219348|placenta-specific 9##BC117332|PLAC9|219348|placenta-specific 9##BC117334|PLAC9|219348|placenta-specific 9##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9##BC007564|ANXA11|311|annexin A11##L19605|ANXA11|311|annexin A11##AB209770|ANXA11|311|annexin A11##AK298362|ANXA11|311|annexin A11##AK222918|ANXA11|311|annexin A11	0.990553	CTCF.p2:0:0.991
chr11	60101630	60101772	reg1013171.p1	10.349	+	NM_001243266 NM_024021 NM_148975 AK292089 AK075081 TSC_hg19_v1_chr11_+_60048138 BC020648 CU676600 DQ891395 DQ894573 AB022821 AK314033 AB013102	-53608	+	AK291870 NM_001247999 NM_152852	-149563	-	AK301387 TSC_hg19_v1_chr11_-_59950526 AB013104 AF350502 AF350503 AF142409 BC022854 BC108728 AK026454 AF212240 AF237908 AF253977 AF261136 AF354930 AK300725 NM_022349 NM_152851	-151051	-	BC101783 AF333758 AF354931 BC069322 NM_139249 GQ129453 GQ129454 AF354933 BC034588 AF354932	681	+	AK075106 NM_021201 NM_206938 NM_206939 NM_206940 AK297027 TSC_hg19_v1_chr11_+_60146004 BC043485 AF309653 AK309884	44286	+	TSC_hg19_v1_chr11_+_60146063 BC020673 AF237916 AF201951 AF350501	44358	+	NM_001243266|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_024021|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_148975|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK292089|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK075081|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC020648|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ891395|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ894573|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB022821|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK314033|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB013102|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK291870|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001247999|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK301387|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AB013104|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF350502|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF350503|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF142409|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC022854|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC108728|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK026454|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF212240|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF237908|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF253977|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF261136|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF354930|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK300725|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_022349|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152851|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC101783|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF333758|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354931|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC069322|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_139249|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129453|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129454|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354933|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC034588|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354932|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AK075106|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_021201|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206938|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206939|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206940|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK297027|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF309653|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK309884|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##BC020673|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF237916|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF201951|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF350501|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7	0.656878	CTCF.p2:-1:0.657
chr16	31394011	31394136	reg1010900.p1	10.349	+	TSC_hg19_v1_chr16_+_31366549 BC037577 BC038237 DQ892486 DQ895697	-27522	+	TSC_hg19_v1_chr16_+_31366521 M81695	-27551	+	TSC_hg19_v1_chr16_+_31366508 AK296666 AK309642 NM_000887	-27581	+	AK097160 AB208945 NM_005353 AK301028 AB384792 U37028	10565	+	DQ890561 DQ893723 M83308 BC029818 NM_005205	45626	-	AK096248 NM_001136509	60273	-	BC037577|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##BC038237|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ892486|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ895697|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##M81695|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##AK296666|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##AK309642|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##NM_000887|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##AK097160|ITGAD|3681|integrin, alpha D##AB208945|ITGAD|3681|integrin, alpha D##NM_005353|ITGAD|3681|integrin, alpha D##AK301028|ITGAD|3681|integrin, alpha D##U37028|ITGAD|3681|integrin, alpha D##DQ890561|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##DQ893723|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##M83308|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##BC029818|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##NM_005205|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##AK096248|ZNF843|283933|zinc finger protein 843##NM_001136509|ZNF843|283933|zinc finger protein 843	0.026497	
chr11	61938799	61938908	reg1010858.p1	10.348	+	TSC_hg19_v1_chr11_+_61891482 AK307633 BC098576 NM_001040694 NM_020238 AK056195 AK310714 BC032678	-47381	+	TSC_hg19_v1_chr11_+_61735277 AK093779 AX748301 BC132894 BC132896	-203519	+	TSC_hg19_v1_chr11_-_61735173 NM_002032	-203706	-	BC062693 AJ224171 BC069170 BC069289 NM_006552	18845	+	AF071219 NM_002407 BC062218 AJ224173	37298	+	NM_006551 BC069290 BC104840 BC104838	70887	+	AK307633|INCENP|3619|inner centromere protein antigens 135/155kDa##BC098576|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_001040694|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_020238|INCENP|3619|inner centromere protein antigens 135/155kDa##AK056195|INCENP|3619|inner centromere protein antigens 135/155kDa##AK310714|INCENP|3619|inner centromere protein antigens 135/155kDa##BC032678|INCENP|3619|inner centromere protein antigens 135/155kDa##AK093779|LOC399900|399900|uncharacterized LOC399900##BC132894|LOC399900|399900|uncharacterized LOC399900##BC132896|LOC399900|399900|uncharacterized LOC399900##NM_002032|FTH1|2495|ferritin, heavy polypeptide 1##BC062693|SCGB1D1|10648|secretoglobin, family 1D, member 1##AJ224171|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069170|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069289|SCGB1D1|10648|secretoglobin, family 1D, member 1##NM_006552|SCGB1D1|10648|secretoglobin, family 1D, member 1##AF071219|SCGB2A1|4246|secretoglobin, family 2A, member 1##NM_002407|SCGB2A1|4246|secretoglobin, family 2A, member 1##BC062218|SCGB2A1|4246|secretoglobin, family 2A, member 1##AJ224173|SCGB2A1|4246|secretoglobin, family 2A, member 1##NM_006551|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC069290|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104840|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104838|SCGB1D2|10647|secretoglobin, family 1D, member 2	0.973087	CTCF.p2:-6:0.973
chr9	7570239	7570372	reg1012428.p1	10.348	+	TSC_hg19_v1_chr9_+_6757984 AB018323 AK304095 AK314355 AB037901 BC008296 AK303651 AK304032 BC104859 BC104861 BC143571	-812266	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	-812638	+	AK310439 NM_001146696	-849443	+	AL137489 TSC_hg19_v1_chr9_-_7799779 BC009510 AK308643 AK128876 AK292632 NM_033428	229410	-	TSC_hg19_v1_chr9_+_8713275 AY779046	1142987	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	1163614	-	AB018323|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304095|KDM4C|23081|lysine (K)-specific demethylase 4C##AK314355|KDM4C|23081|lysine (K)-specific demethylase 4C##AB037901|KDM4C|23081|lysine (K)-specific demethylase 4C##BC008296|KDM4C|23081|lysine (K)-specific demethylase 4C##AK303651|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304032|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104859|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104861|KDM4C|23081|lysine (K)-specific demethylase 4C##BC143571|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##AL137489|C9orf123|90871|chromosome 9 open reading frame 123##BC009510|C9orf123|90871|chromosome 9 open reading frame 123##AK292632|C9orf123|90871|chromosome 9 open reading frame 123##NM_033428|C9orf123|90871|chromosome 9 open reading frame 123##AY779046|RPL18A|6142|ribosomal protein L18a##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	0.998544	CTCF.p2:7:0.999
chr13	61201384	61201489	reg1010504.p1	10.347	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-229957	+	BX537910 NM_001146071 NM_030794	-230846	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-463335	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	787817	-	AK289924 NM_022843	788218	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	6603068	-	EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9	0.0	
chr14	75372434	75372500	reg1016976.p2	10.347	+	TSC_hg19_v1_chr14_+_75348624 NM_001244883 NM_001933 AK289414 BX248276 AK299505 AK316463 AK300396 BC000302 BC001922 BC002735 BX248764 D16373 CR456727 CU674146 L37418 BX248774	-23842	+	BC105720 BC105721 BC105927 NM_001080408 NM_001243007	-41932	-	TSC_hg19_v1_chr14_+_75283667 BC023570	-88767	+	NM_031464	16677	-	TSC_hg19_v1_chr14_-_75389964 BC036574 AK226137 AK054800	17486	-	BX248289 NM_001207012 NM_002632	49999	-	NM_001244883|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##NM_001933|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK289414|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248276|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK299505|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK316463|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK300396|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC000302|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC001922|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC002735|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248764|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##D16373|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##CR456727|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##L37418|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248774|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC105720|PROX2|283571|prospero homeobox 2##BC105721|PROX2|283571|prospero homeobox 2##BC105927|PROX2|283571|prospero homeobox 2##NM_001080408|PROX2|283571|prospero homeobox 2##NM_001243007|PROX2|283571|prospero homeobox 2##BC023570|YLPM1|56252|YLP motif containing 1##NM_031464|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##BC036574|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK226137|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK054800|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##BX248289|PGF|5228|placental growth factor##NM_001207012|PGF|5228|placental growth factor##NM_002632|PGF|5228|placental growth factor	0.0	
chr19	39601148	39601259	reg1010943.p1	10.347	+	AK131245 NM_001004318	-26259	+	TSC_hg19_v1_chr19_-_39523185 BC030060 AF436061 BC014527 NM_178820	-77970	-	CU677033 TSC_hg19_v1_chr19_-_39522905	-78304	-	TSC_hg19_v1_chr19_+_39616436 AK294586 NM_001014831 NM_001014832 NM_001014834 NM_001014835 NM_005884 AK293517 AK291839 AX775863 AX775865 AK300632 BC002921 AX775871 BC034511 AK304651 BC011368 AL834236 AX775867 AX775869 BC025282 AF005046 AB032968	15242	+	BC092493 AK123941 BC067874 NM_001001414 TSC_hg19_v1_chr19_+_39687603	86399	+	BC039541 AK130951 TSC_hg19_v1_chr19_-_39694904 BC121075 BC121076 NM_001080468	93695	-	AK131245|PAPL|390928|iron/zinc purple acid phosphatase-like protein##NM_001004318|PAPL|390928|iron/zinc purple acid phosphatase-like protein##BC030060|FBXO27|126433|F-box protein 27##AF436061|FBXO27|126433|F-box protein 27##BC014527|FBXO27|126433|F-box protein 27##NM_178820|FBXO27|126433|F-box protein 27##AK294586|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014831|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014832|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014834|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014835|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_005884|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK293517|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK291839|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775863|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775865|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK300632|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC002921|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775871|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC034511|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK304651|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC011368|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AL834236|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775867|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775869|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC025282|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AF005046|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AB032968|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC092493|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##AK123941|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##BC067874|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##NM_001001414|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##BC039541|SYCN|342898|syncollin##AK130951|SYCN|342898|syncollin##BC121075|SYCN|342898|syncollin##BC121076|SYCN|342898|syncollin##NM_001080468|SYCN|342898|syncollin	0.991552	CTCF.p2:-3:0.992
chr7	117099164	117099296	reg1010828.p1	10.347	+	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	-31685	-	BC078170 AK056742 NM_003391 X07876	-135895	-	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	-438865	+	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	20808	+	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	414251	-	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	414313	-	HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2	0.972756	CTCF.p2:6:0.973
chr1	201451341	201451437	reg1008802.p2	10.346	+	BC014390 TSC_hg19_v1_chr1_-_201438317 AF151100 AK075179 AK222644 BC068273 NM_012396	-13124	-	AJ315823 BC012601 TSC_hg19_v1_chr1_-_201390859 AK223588 J04760 AK311896 AL831820 AL831975 BC012600 BX510903 NM_003281	-60530	-	TSC_hg19_v1_chr1_-_201368726 BC071890	-82648	-	AK293053 NM_001193572	14311	-	AK290133 NM_001193571	24577	-	TSC_hg19_v1_chr1_-_201476239 BC007492 M33146 BC032493	24840	-	BC014390|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AF151100|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK075179|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK222644|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##BC068273|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##NM_012396|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)##AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)##J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)##AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)##AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)##AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)##BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)##NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC071890|LAD1|3898|ladinin 1##AK293053|CSRP1|1465|cysteine and glycine-rich protein 1##NM_001193572|CSRP1|1465|cysteine and glycine-rich protein 1##AK290133|CSRP1|1465|cysteine and glycine-rich protein 1##NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1##BC007492|CSRP1|1465|cysteine and glycine-rich protein 1##M33146|CSRP1|1465|cysteine and glycine-rich protein 1##BC032493|CSRP1|1465|cysteine and glycine-rich protein 1	0.99951	CTCF.p2:-12:1.000
chr12	85862564	85862664	reg1009573.p2	10.346	+	U31986 TSC_hg19_v1_chr12_+_85673999 BC010923 NM_006982	-188655	+	AK022365 NM_001079910 BC005399 BC093088 AK307799	-432491	+	AK126325 NM_001100917	-432560	-	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	367431	-	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	367623	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	405512	+	U31986|ALX1|8092|ALX homeobox 1##BC010923|ALX1|8092|ALX homeobox 1##NM_006982|ALX1|8092|ALX homeobox 1##AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK126325|TSPAN19|144448|tetraspanin 19##NM_001100917|TSPAN19|144448|tetraspanin 19##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin	0.955398	CTCF.p2:-5:0.955
chr20	2332604	2332714	reg1011628.p1	10.346	+	NM_003245 AK298637 AK299447 AK308249 AK290324 AK291351 AK315236 L10386 BC109075 BC109076	-56010	+	TSC_hg19_v1_chr20_-_2083527 BC034792	-249133	-	BC140883 BC140884 TSC_hg19_v1_chr20_+_2083583 AB527968 AF195026 BC111573 BC017340 AK302629	-249144	+	AF540969 AF540970 NM_198994	28894	+	TSC_hg19_v1_chr20_-_2451416 X17568 X17567 BC080516	118731	-	TSC_hg19_v1_chr20_-_2451436 AK301034 AK312620 AK301206 AK307093 AK307266	118773	-	NM_003245|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK298637|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK299447|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK308249|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK290324|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291351|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK315236|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##L10386|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109075|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109076|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC140883|STK35|140901|serine/threonine kinase 35##BC140884|STK35|140901|serine/threonine kinase 35##AF195026|STK35|140901|serine/threonine kinase 35##BC111573|STK35|140901|serine/threonine kinase 35##BC017340|STK35|140901|serine/threonine kinase 35##AK302629|STK35|140901|serine/threonine kinase 35##AF540969|TGM6|343641|transglutaminase 6##AF540970|TGM6|343641|transglutaminase 6##NM_198994|TGM6|343641|transglutaminase 6##X17568|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##X17567|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##BC080516|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK301034|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK312620|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK301206|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK307093|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1	0.995838	CTCF.p2:-3:0.996
chr2	118529922	118530060	reg1012989.p1	10.346	+	NM_001178034 DQ857322 AK296490 NM_001004360 AY387785 AB040925 AB385475 DQ857323	-2610330	+	NM_001178037 DQ857321	-2707701	+	AK055256 BC038514 NM_001178036	-3310825	+	NM_006773 TSC_hg19_v1_chr2_+_118572276 BC024739	42277	+	AK001467 TSC_hg19_v1_chr2_+_118572283	42292	+	TSC_hg19_v1_chr2_+_118572298 BC003360 BC001238	42326	+	NM_001178034|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857322|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK296490|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001004360|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AY387785|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AB040925|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857323|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178037|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857321|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_006773|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC024739|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##AK001467|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC003360|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC001238|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	0.90243	CTCF.p2:5:0.902
chr6	71665742	71665854	reg1011244.p1	10.346	+	TSC_hg19_v1_chr6_+_71377620 AK315579 BC028074 BC008672 AK303387 BC036123 AK023221 AY055003 AY055004 AK222711 AK290448 CU688386	-288143	+	TSC_hg19_v1_chr6_+_71377511 NM_001044305 NM_021940 AF442495	-288275	+	TSC_hg19_v1_chr6_+_71276632 BC018085 NM_145267 BC104649 GQ129294 GQ129295	-389173	+	AB075843 NM_080742	965	-	NM_024576 TSC_hg19_v1_chr6_+_71998479	332688	+	TSC_hg19_v1_chr6_+_71998513 BC018688	332712	+	AK315579|SMAP1|60682|small ArfGAP 1##BC028074|SMAP1|60682|small ArfGAP 1##BC008672|SMAP1|60682|small ArfGAP 1##AK303387|SMAP1|60682|small ArfGAP 1##BC036123|SMAP1|60682|small ArfGAP 1##AK023221|SMAP1|60682|small ArfGAP 1##AY055003|SMAP1|60682|small ArfGAP 1##AY055004|SMAP1|60682|small ArfGAP 1##AK222711|SMAP1|60682|small ArfGAP 1##AK290448|SMAP1|60682|small ArfGAP 1##NM_001044305|SMAP1|60682|small ArfGAP 1##NM_021940|SMAP1|60682|small ArfGAP 1##AF442495|SMAP1|60682|small ArfGAP 1##BC018085|C6orf57|135154|chromosome 6 open reading frame 57##NM_145267|C6orf57|135154|chromosome 6 open reading frame 57##BC104649|C6orf57|135154|chromosome 6 open reading frame 57##GQ129294|C6orf57|135154|chromosome 6 open reading frame 57##GQ129295|C6orf57|135154|chromosome 6 open reading frame 57##AB075843|B3GAT2|135152|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)##NM_080742|B3GAT2|135152|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)##NM_024576|OGFRL1|79627|opioid growth factor receptor-like 1##BC018688|OGFRL1|79627|opioid growth factor receptor-like 1	0.866205	CTCF.p2:14:0.866
chr11	124065959	124066071	reg1011658.p1	10.345	+	TSC_hg19_v1_chr11_+_123986156 AY366503 AY366504 AY366505 AY366506 AY366507 AY366508 NM_001130142 NM_014622 NM_198315 BC001234 AK291698 AK295247	-79881	+	AB529276 NM_001004463	-156308	-	BC136917 BC136920 NM_001004464	-165703	+	BC136638 BC136639 NM_001007249	29355	+	AB463982 NM_001002905	54407	+	BC136820 BC136822 NM_001005198	68695	+	AY366503|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366504|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366505|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366506|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366507|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366508|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_001130142|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_014622|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_198315|VWA5A|4013|von Willebrand factor A domain containing 5A##BC001234|VWA5A|4013|von Willebrand factor A domain containing 5A##AK291698|VWA5A|4013|von Willebrand factor A domain containing 5A##AK295247|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_001004463|OR10G7|390265|olfactory receptor, family 10, subfamily G, member 7##BC136917|OR10G8|219869|olfactory receptor, family 10, subfamily G, member 8##BC136920|OR10G8|219869|olfactory receptor, family 10, subfamily G, member 8##NM_001004464|OR10G8|219869|olfactory receptor, family 10, subfamily G, member 8##BC136638|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2##BC136639|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2##NM_001007249|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2##NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1##BC136820|OR8G5|219865|olfactory receptor, family 8, subfamily G, member 5##BC136822|OR8G5|219865|olfactory receptor, family 8, subfamily G, member 5##NM_001005198|OR8G5|219865|olfactory receptor, family 8, subfamily G, member 5	0.866904	CTCF.p2:11:0.867
chr11	72142144	72142260	reg1010089.p2	10.345	+	TSC_hg19_v1_chr11_-_71955221 AK290645 NM_005169	-186967	-	BC041564 TSC_hg19_v1_chr11_-_71955201	-187000	-	Y14385 BC140853 NM_001567	-206350	+	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	3253	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	3374	-	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	3448	-	AK290645|PHOX2A|401|paired-like homeobox 2a##NM_005169|PHOX2A|401|paired-like homeobox 2a##BC041564|PHOX2A|401|paired-like homeobox 2a##Y14385|INPPL1|3636|inositol polyphosphate phosphatase-like 1##BC140853|INPPL1|3636|inositol polyphosphate phosphatase-like 1##NM_001567|INPPL1|3636|inositol polyphosphate phosphatase-like 1##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)	0.996935	CTCF.p2:8:0.997
chr14	62327165	62327295	reg1012908.p1	10.345	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	-98111	+	FJ790247 NM_001243084	-162891	+	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	-165040	+	AJ617628 NM_031914 BC117363 BC143598 HQ258344 AB102949	135408	+	TSC_hg19_v1_chr14_+_62584125 BX248751	256928	+	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	1184699	-	AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AJ617628|SYT16|83851|synaptotagmin XVI##NM_031914|SYT16|83851|synaptotagmin XVI##BC117363|SYT16|83851|synaptotagmin XVI##BC143598|SYT16|83851|synaptotagmin XVI##HQ258344|SYT16|83851|synaptotagmin XVI##AB102949|SYT16|83851|synaptotagmin XVI##BX248751|FLJ43390|646113|uncharacterized LOC646113##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5	0.0	
chr2	17081792	17081912	reg1009871.p1	10.345	+	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	-234708	-	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-999685	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-999857	+	DQ860102 NM_001099218	617853	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	640035	+	TSC_hg19_v1_chr2_+_17721989 AF039555 U14747 AB001104	640168	+	BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1##AF039555|VSNL1|7447|visinin-like 1##U14747|VSNL1|7447|visinin-like 1##AB001104|VSNL1|7447|visinin-like 1	0.302141	
chr5	141372065	141372176	reg1009108.p1	10.345	+	TSC_hg19_v1_chr5_+_141348760 BX647955	-23366	+	TSC_hg19_v1_chr5_+_141348705 AK023698 AK023884 AK294262 NM_183401	-23417	+	TSC_hg19_v1_chr5_+_141348669 AK295965 AK057868 AB022663	-23455	+	D31766 TSC_hg19_v1_chr5_-_141392593 AK290686 AK022779 AK296452 BC020769 BC022322 NM_005471	20458	-	AK075495 TSC_hg19_v1_chr5_+_141488283	116131	+	TSC_hg19_v1_chr5_+_141488343 NM_030571 AK315481 AY192728	116228	+	BX647955|RNF14|9604|ring finger protein 14##AK023698|RNF14|9604|ring finger protein 14##AK023884|RNF14|9604|ring finger protein 14##AK294262|RNF14|9604|ring finger protein 14##NM_183401|RNF14|9604|ring finger protein 14##AK295965|RNF14|9604|ring finger protein 14##AK057868|RNF14|9604|ring finger protein 14##AB022663|RNF14|9604|ring finger protein 14##D31766|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##AK290686|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##AK022779|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##AK296452|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##BC020769|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##BC022322|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##NM_005471|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##AK075495|NDFIP1|80762|Nedd4 family interacting protein 1##NM_030571|NDFIP1|80762|Nedd4 family interacting protein 1##AK315481|NDFIP1|80762|Nedd4 family interacting protein 1##AY192728|NDFIP1|80762|Nedd4 family interacting protein 1	0.999733	CTCF.p2:-10:1.000
chr2	131555675	131555805	reg1006130.p2	10.344	+	TSC_hg19_v1_chr2_+_131513793 NM_001105194 NM_001105195	-41918	+	AK289525 NM_152698 AK095696 AK291424 BC113445 BC113447 BC143806 NM_001105193	-42625	+	BC105013 BC105041 NM_207364 AY569570 AY280965	-69057	+	AF249745 NM_015320 NM_032995	118483	+	TSC_hg19_v1_chr2_-_131851008 BC066347 BC110642 NM_001009993	295258	-	AK126289 NM_001100623 NM_017958	306679	+	NM_001105194|FAM123C|205147|family with sequence similarity 123C##NM_001105195|FAM123C|205147|family with sequence similarity 123C##AK289525|FAM123C|205147|family with sequence similarity 123C##NM_152698|FAM123C|205147|family with sequence similarity 123C##AK095696|FAM123C|205147|family with sequence similarity 123C##AK291424|FAM123C|205147|family with sequence similarity 123C##BC113445|FAM123C|205147|family with sequence similarity 123C##BC113447|FAM123C|205147|family with sequence similarity 123C##BC143806|FAM123C|205147|family with sequence similarity 123C##NM_001105193|FAM123C|205147|family with sequence similarity 123C##BC105013|GPR148|344561|G protein-coupled receptor 148##BC105041|GPR148|344561|G protein-coupled receptor 148##NM_207364|GPR148|344561|G protein-coupled receptor 148##AY569570|GPR148|344561|G protein-coupled receptor 148##AY280965|GPR148|344561|G protein-coupled receptor 148##AF249745|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##NM_015320|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##NM_032995|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##BC066347|FAM168B|130074|family with sequence similarity 168, member B##BC110642|FAM168B|130074|family with sequence similarity 168, member B##NM_001009993|FAM168B|130074|family with sequence similarity 168, member B##AK126289|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_001100623|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_017958|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2	0.132945	
chr2	231689337	231689479	reg1012886.p1	10.344	+	AK292382 NM_001130849 NM_001130850 AK315692	-111130	+	TSC_hg19_v1_chr2_+_231577633 BC020570	-111764	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	-111862	+	TSC_hg19_v1_chr2_+_231729608 NM_001012514 NM_001012516 NM_030926	40152	+	TSC_hg19_v1_chr2_+_231729626 AF271781 AF272043	40221	+	TSC_hg19_v1_chr2_+_231729653 AK075361 AK090975 AK303199 AX746713	40237	+	AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##NM_016289|CAB39|51719|calcium binding protein 39##NM_001012514|ITM2C|81618|integral membrane protein 2C##NM_001012516|ITM2C|81618|integral membrane protein 2C##NM_030926|ITM2C|81618|integral membrane protein 2C##AF271781|ITM2C|81618|integral membrane protein 2C##AF272043|ITM2C|81618|integral membrane protein 2C##AK075361|ITM2C|81618|integral membrane protein 2C##AK090975|ITM2C|81618|integral membrane protein 2C##AK303199|ITM2C|81618|integral membrane protein 2C	0.988392	CTCF.p2:-6:0.988
chr19	3074049	3074169	reg1010906.p1	10.343	+	TSC_hg19_v1_chr19_-_3062919 AB527754 HQ258149 BC113735 BC113737 NM_198969 AK094591	-11102	-	X73357 TSC_hg19_v1_chr19_-_3062347 U04241 AF072902 AK314713 NM_001130 NM_198970	-11827	-	X73358 TSC_hg19_v1_chr19_-_3061344	-12812	-	TSC_hg19_v1_chr19_+_3094359 BC089041 NM_002067	20249	+	TSC_hg19_v1_chr19_+_3094528 BC096225 BC096226 BC096227 AB463701 AF011497 AF493900 CR457004 AB209435	20482	+	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	48284	+	HQ258149|AES|166|amino-terminal enhancer of split##BC113735|AES|166|amino-terminal enhancer of split##BC113737|AES|166|amino-terminal enhancer of split##NM_198969|AES|166|amino-terminal enhancer of split##AK094591|AES|166|amino-terminal enhancer of split##X73357|AES|166|amino-terminal enhancer of split##U04241|AES|166|amino-terminal enhancer of split##AF072902|AES|166|amino-terminal enhancer of split##AK314713|AES|166|amino-terminal enhancer of split##NM_001130|AES|166|amino-terminal enhancer of split##NM_198970|AES|166|amino-terminal enhancer of split##X73358|AES|166|amino-terminal enhancer of split##BC089041|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##NM_002067|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096225|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096226|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096227|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF011497|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF493900|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##CR457004|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AB209435|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)	0.138075	
chr22	34319805	34319912	reg1010130.p2	10.343	+	AJ007583 AB011181 NM_004737 NM_133642	-3488	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-865503	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-917132	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1142291	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1333618	+	AK293694 NM_001135729	1375409	+	AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)	0.951791	CTCF.p2:-4:0.952
chr6	150247457	150247565	reg1011314.p1	10.343	+	AY172580 BC096719 BC098152 AY172579 NM_001001788 AK310157	-3311	-	AY359075 NM_001243328	-30317	-	AY054974 AY176317 AY252119 EF489426 AF359243 BC101976 BC103694 AY069961 NM_001243325 NM_001243327 NM_139165	-35409	-	AK299895 AB052906 NM_025217 TSC_hg19_v1_chr6_+_150263162 AX772820 BC034689 AY358665 AF304378 AY026825 CU689938	15653	+	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	37651	+	BC131600 AB528849 AY039682 NM_130900	99122	-	AY172580|RAET1G|353091|retinoic acid early transcript 1G##BC096719|RAET1G|353091|retinoic acid early transcript 1G##BC098152|RAET1G|353091|retinoic acid early transcript 1G##AY172579|RAET1G|353091|retinoic acid early transcript 1G##NM_001001788|RAET1G|353091|retinoic acid early transcript 1G##AK310157|RAET1G|353091|retinoic acid early transcript 1G##AY359075|RAET1E|135250|retinoic acid early transcript 1E##NM_001243328|RAET1E|135250|retinoic acid early transcript 1E##AY054974|RAET1E|135250|retinoic acid early transcript 1E##AY176317|RAET1E|135250|retinoic acid early transcript 1E##AY252119|RAET1E|135250|retinoic acid early transcript 1E##EF489426|RAET1E|135250|retinoic acid early transcript 1E##AF359243|RAET1E|135250|retinoic acid early transcript 1E##BC101976|RAET1E|135250|retinoic acid early transcript 1E##BC103694|RAET1E|135250|retinoic acid early transcript 1E##AY069961|RAET1E|135250|retinoic acid early transcript 1E##NM_001243325|RAET1E|135250|retinoic acid early transcript 1E##NM_001243327|RAET1E|135250|retinoic acid early transcript 1E##NM_139165|RAET1E|135250|retinoic acid early transcript 1E##AK299895|ULBP2|80328|UL16 binding protein 2##AB052906|ULBP2|80328|UL16 binding protein 2##NM_025217|ULBP2|80328|UL16 binding protein 2##AX772820|ULBP2|80328|UL16 binding protein 2##BC034689|ULBP2|80328|UL16 binding protein 2##AY358665|ULBP2|80328|UL16 binding protein 2##AF304378|ULBP2|80328|UL16 binding protein 2##AY026825|ULBP2|80328|UL16 binding protein 2##AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L	0.017815	
chr19	1315784	1315910	reg1011965.p1	10.342	+	TSC_hg19_v1_chr19_+_1286081 AJ007292 NM_001405 AB463609	-29882	+	TSC_hg19_v1_chr19_+_1275540 NM_017914 BC000890 BC012080	-40280	+	CU674448 AB528491 EU176219 EU176522 AB451225 AB451348 BT007210 TSC_hg19_v1_chr19_+_1270968	-44898	+	TSC_hg19_v1_chr19_+_1354979 NM_032853 AK310721 U20897	39154	+	TSC_hg19_v1_chr19_+_1383882 AK092169 AX747389 NM_024407 AK128713	68039	+	AK293917 AK297611 TSC_hg19_v1_chr19_+_1383902 AF115969 AK091623 AK127759 AX747100	68053	+	AJ007292|EFNA2|1943|ephrin-A2##NM_001405|EFNA2|1943|ephrin-A2##NM_017914|C19orf24|55009|chromosome 19 open reading frame 24##BC000890|C19orf24|55009|chromosome 19 open reading frame 24##BC012080|C19orf24|55009|chromosome 19 open reading frame 24##EU176219|CIRBP|1153|cold inducible RNA binding protein##EU176522|CIRBP|1153|cold inducible RNA binding protein##AB451225|CIRBP|1153|cold inducible RNA binding protein##AB451348|CIRBP|1153|cold inducible RNA binding protein##BT007210|CIRBP|1153|cold inducible RNA binding protein##NM_032853|MUM1|84939|melanoma associated antigen (mutated) 1##AK310721|MUM1|84939|melanoma associated antigen (mutated) 1##U20897|MUM1|84939|melanoma associated antigen (mutated) 1##AK092169|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##NM_024407|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK128713|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK293917|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AF115969|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK091623|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK127759|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)	0.630794	CTCF.p2:-3:0.631
chr10	35409380	35409502	reg1009326.p1	10.341	+	TSC_hg19_v1_chr10_-_35379513 BC095405 BC110901 AL832733 AK095217 NM_001198777	-29917	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	-30169	-	AK310225 AK300491 NM_001198778 NM_001198779	-46229	-	NM_001881 NM_182850 NM_182853 NM_183013 BC066342 TSC_hg19_v1_chr10_+_35415928 BC017117	6421	+	D14825 TSC_hg19_v1_chr10_+_35416154	6694	+	NM_181571 NM_183060 BC041810	6944	+	BC095405|CUL2|8453|cullin 2##BC110901|CUL2|8453|cullin 2##AL832733|CUL2|8453|cullin 2##AK095217|CUL2|8453|cullin 2##NM_001198777|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##NM_001881|CREM|1390|cAMP responsive element modulator##NM_182850|CREM|1390|cAMP responsive element modulator##NM_182853|CREM|1390|cAMP responsive element modulator##NM_183013|CREM|1390|cAMP responsive element modulator##BC066342|CREM|1390|cAMP responsive element modulator##BC017117|CREM|1390|cAMP responsive element modulator##D14825|CREM|1390|cAMP responsive element modulator##NM_181571|CREM|1390|cAMP responsive element modulator##NM_183060|CREM|1390|cAMP responsive element modulator##BC041810|CREM|1390|cAMP responsive element modulator	0.924256	CTCF.p2:-21:0.924
chr1	116694767	116694880	reg1011786.p1	10.341	+	AK096035 NM_152367	-40448	+	TSC_hg19_v1_chr1_+_116519194 BC070033 AY358258 AY145501 CU693234 DQ892367 DQ895576	-175594	+	NM_018420 BC026358 TSC_hg19_v1_chr1_+_116519161	-175680	+	NM_000701 TSC_hg19_v1_chr1_+_116915824	220988	+	BC003077 TSC_hg19_v1_chr1_+_116915881 BC050359	221059	+	TSC_hg19_v1_chr1_+_116915952 AK314777	221125	+	AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)##BC070033|SLC22A15|55356|solute carrier family 22, member 15##AY358258|SLC22A15|55356|solute carrier family 22, member 15##AY145501|SLC22A15|55356|solute carrier family 22, member 15##DQ892367|SLC22A15|55356|solute carrier family 22, member 15##DQ895576|SLC22A15|55356|solute carrier family 22, member 15##NM_018420|SLC22A15|55356|solute carrier family 22, member 15##BC026358|SLC22A15|55356|solute carrier family 22, member 15##NM_000701|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC003077|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC050359|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK314777|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.084399	
chr9	70957598	70957749	reg1012624.p1	10.341	+	AY344641 AY344642 NM_199135 BC137365 BC137366 EU446685 BC103887	-39849	+	NM_201453 AK293173 AY344633 AK297912 BC069006 BC082271 AF265442 CU688346	-100781	+	TSC_hg19_v1_chr9_-_70490188 NM_001024916 NM_201453	-467497	-	BC033073 NM_021965	14141	+	DQ890797 DQ893952 BC029780 NM_153237 TSC_hg19_v1_chr9_-_71155800	198092	-	TSC_hg19_v1_chr9_+_71320206 AK295587 AK292734 NM_003558	362703	+	AY344641|FOXD4L3|286380|forkhead box D4-like 3##AY344642|FOXD4L3|286380|forkhead box D4-like 3##NM_199135|FOXD4L3|286380|forkhead box D4-like 3##BC137365|FOXD4L6|653404|forkhead box D4-like 6##BC137366|FOXD4L6|653404|forkhead box D4-like 6##EU446685|FOXD4L6|653404|forkhead box D4-like 6##BC103887|FOXD4L6|653404|forkhead box D4-like 6##NM_201453|CBWD3|445571|COBW domain containing 3##AK293173|CBWD6|644019|COBW domain containing 6##AY344633|CBWD3|445571|COBW domain containing 3##AK297912|CBWD3|445571|COBW domain containing 3##BC069006|CBWD6|644019|COBW domain containing 6##BC082271|CBWD5|220869|COBW domain containing 5##AF265442|CBWD5|220869|COBW domain containing 5##NM_001024916|CBWD5|220869|COBW domain containing 5##NM_201453|CBWD3|445571|COBW domain containing 3##BC033073|PGM5|5239|phosphoglucomutase 5##NM_021965|PGM5|5239|phosphoglucomutase 5##DQ890797|C9orf71|169693|chromosome 9 open reading frame 71##DQ893952|C9orf71|169693|chromosome 9 open reading frame 71##BC029780|C9orf71|169693|chromosome 9 open reading frame 71##NM_153237|C9orf71|169693|chromosome 9 open reading frame 71##AK295587|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##AK292734|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_003558|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta	0.011183	
chrY	1717612	1717725	reg1010113.p2	10.341	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	-33665	+	NM_004043 U11090	-53321	+	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	-57139	+	BC015030 NM_001171135	650911	-	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	651320	-	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	841644	+	AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015030|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1##BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule	0.999763	CTCF.p2:-2:1.000
chr1	146714156	146714303	reg1012599.p1	10.340	+	AK314647 TSC_hg19_v1_chr1_-_146697221 AK022172 NM_001144829 NM_001144830 NM_001461	-17037	-	TSC_hg19_v1_chr1_-_146696932 BC035687 L37080 Z47553 BC020872 AK222728 AK225739	-17284	-	AK295985 TSC_hg19_v1_chr1_+_146649617	-64649	+	NM_004284 TSC_hg19_v1_chr1_+_146714333 EF560738 AF537213 AK001342 AK027631 AK307400	82	+	TSC_hg19_v1_chr1_+_146714335 AK298424 AK297135 BC077717 AK293157 BC001171 AF054177 BC043501 BC053354 BC005038	135	+	NM_004326 Y13620 AK298105 TSC_hg19_v1_chr1_+_147013319	299022	+	AK314647|FMO5|2330|flavin containing monooxygenase 5##AK022172|FMO5|2330|flavin containing monooxygenase 5##NM_001144829|FMO5|2330|flavin containing monooxygenase 5##NM_001144830|FMO5|2330|flavin containing monooxygenase 5##NM_001461|FMO5|2330|flavin containing monooxygenase 5##BC035687|FMO5|2330|flavin containing monooxygenase 5##L37080|FMO5|2330|flavin containing monooxygenase 5##Z47553|FMO5|2330|flavin containing monooxygenase 5##BC020872|FMO5|2330|flavin containing monooxygenase 5##AK222728|FMO5|2330|flavin containing monooxygenase 5##AK225739|FMO5|2330|flavin containing monooxygenase 5##NM_004284|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##EF560738|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF537213|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK001342|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK027631|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK307400|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK298424|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK297135|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC077717|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK293157|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC001171|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF054177|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC043501|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC053354|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC005038|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##NM_004326|BCL9|607|B-cell CLL/lymphoma 9##Y13620|BCL9|607|B-cell CLL/lymphoma 9	0.538623	CTCF.p2:9:0.539
chr1	38440805	38440916	reg1009998.p2	10.339	+	TSC_hg19_v1_chr1_-_38412726 NM_005540	-28131	-	TSC_hg19_v1_chr1_-_38412723 M74161	-28139	-	TSC_hg19_v1_chr1_-_38412717 BC062317 AK310824	-28149	-	AB464245 CU677944 DQ891120 EU176559 U08815 AK222554 AK301424 TSC_hg19_v1_chr1_-_38455660 AK291181 BC002395 AK292116 BC011523 NM_006802	14838	-	TSC_hg19_v1_chr1_-_38471187 BC014501 BC001351 BC011697 AK309179 AK290641 NM_001243878 NM_004468	30373	-	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	37525	+	NM_005540|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##M74161|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##BC062317|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##AK310824|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##DQ891120|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##EU176559|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##U08815|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##AK222554|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##AK301424|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##AK291181|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##BC002395|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##AK292116|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##BC011523|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##NM_006802|SF3A3|10946|splicing factor 3a, subunit 3, 60kDa##BC014501|FHL3|2275|four and a half LIM domains 3##BC001351|FHL3|2275|four and a half LIM domains 3##BC011697|FHL3|2275|four and a half LIM domains 3##AK309179|FHL3|2275|four and a half LIM domains 3##AK290641|FHL3|2275|four and a half LIM domains 3##NM_001243878|FHL3|2275|four and a half LIM domains 3##NM_004468|FHL3|2275|four and a half LIM domains 3##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	0.994441	CTCF.p2:21:0.994
chr16	22692102	22692222	reg1009077.p1	10.339	+	NM_001135865 BC036263 AK296338 CU690320	-167180	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	-306367	-	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	-383414	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	133340	+	AB209794 AF105374 AF105375 NM_006043 BC093734 BC093736	133689	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	468387	-	NM_001135865|LOC100132247|100132247|nuclear pore complex interacting protein related gene##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296338|LOC100132247|100132247|nuclear pore complex interacting protein related gene##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AB209794|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105374|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105375|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_006043|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093734|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093736|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31	0.99381	CTCF.p2:7:0.994
chr17	49539017	49539153	reg1013824.p1	10.339	+	AF151806 TSC_hg19_v1_chr17_+_49337913 AK314399 BC025276 BC001535	-201160	+	TSC_hg19_v1_chr17_+_49337906 NM_016001	-201186	+	TSC_hg19_v1_chr17_+_49337888 AK026355	-201199	+	TSC_hg19_v1_chr17_-_50235676 AK294652 AK313001	696603	-	TSC_hg19_v1_chr17_-_50236075 BC047456 BC068462	696955	-	CR936674 TSC_hg19_v1_chr17_-_50236127 NM_020178	697053	-	AF151806|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK314399|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC025276|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC001535|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##NM_016001|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK026355|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK294652|CA10|56934|carbonic anhydrase X##AK313001|CA10|56934|carbonic anhydrase X##BC047456|CA10|56934|carbonic anhydrase X##BC068462|CA10|56934|carbonic anhydrase X##NM_020178|CA10|56934|carbonic anhydrase X	0.994926	CTCF.p2:-6:0.995
chr3	140456020	140456154	reg1011354.p1	10.339	+	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	-59128	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-801835	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-802069	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	204680	+	TSC_hg19_v1_chr3_+_140770412 BC051354	314391	+	AF403029 BC008324 NM_080862 AK056367	314670	+	NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.971109	CTCF.p2:30:0.971
chrX	148552512	148552643	reg1011220.p1	10.339	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-751965	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-970389	+	BC034320 NM_152578 AY211917 AK098602	-1489722	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	34197	-	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	69853	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	70017	+	AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A	0.030983	
chr11	15349388	15349480	reg1010200.p1	10.338	+	AB236158 NM_001042536	-212951	+	AB236159 NM_001031853	-215465	+	BC008428 AK291188 BC092468 NM_000728	-254308	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	1074967	-	BC037866 NM_001145811	1080993	-	AF309034 NM_033326	1148491	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	0.042375	
chr14	30018210	30018324	reg1010044.p2	10.337	+	TSC_hg19_v1_chr14_+_29241992 BX248251	-776272	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-781354	+	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	-782039	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	378587	-	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	1010093	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	1073257	+	BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1	0.985613	CTCF.p2:-4:0.986
chr19	55164793	55164915	reg1010910.p1	10.337	+	NM_001081638 NM_001081639 TSC_hg19_v1_chr19_+_55141934 AK223310 AF283984 AF004230 NM_001081637 AF283985	-22887	+	AK311555 BC015731 NM_006669 AK292028	-36217	+	BC047007 AK290919 AK311226 AF025530 NM_006863 BC032238 BC063009 AF025529	-59769	+	NM_001081438 NM_006847	9269	+	TSC_hg19_v1_chr19_+_55174417 AK292082 AK309227 AK314783	9559	+	TSC_hg19_v1_chr19_+_55174436 AF283988 EU915607 BC026309 AF025532 DQ892089 DQ895282 CU693206 CR542048 U82979	9601	+	NM_001081638|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081639|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AK223310|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AF283984|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081637|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AF283985|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##BC015731|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_006669|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AK292028|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##BC047007|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AK290919|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AK311226|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AF025530|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##NM_006863|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##BC032238|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##BC063009|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AF025529|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##NM_001081438|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##NM_006847|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK292082|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK309227|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK314783|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AF283988|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##EU915607|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##BC026309|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AF025532|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##DQ892089|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##DQ895282|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##CR542048|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##U82979|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4	0.827378	CTCF.p2:-8:0.827
chr1	44843998	44844109	reg1011651.p1	10.336	+	TSC_hg19_v1_chr1_-_44820942 AK026596	-23092	-	TSC_hg19_v1_chr1_-_44820938 AK290567 NM_024066	-23117	-	AK308597 TSC_hg19_v1_chr1_-_44820929 BC144384	-23127	-	AK056424 TSC_hg19_v1_chr1_+_44870926 BC034221 NM_018150	26889	+	TSC_hg19_v1_chr1_+_45097700 AK296038 AK225180	253709	+	CR457348 AK026006 AK225405 TSC_hg19_v1_chr1_-_45140099 BC064520 NM_024587 AL832539	296034	-	AK026596|ERI3|79033|ERI1 exoribonuclease family member 3##AK290567|ERI3|79033|ERI1 exoribonuclease family member 3##NM_024066|ERI3|79033|ERI1 exoribonuclease family member 3##BC144384|ERI3|79033|ERI1 exoribonuclease family member 3##AK056424|RNF220|55182|ring finger protein 220##BC034221|RNF220|55182|ring finger protein 220##NM_018150|RNF220|55182|ring finger protein 220##AK296038|RNF220|55182|ring finger protein 220##AK225180|RNF220|55182|ring finger protein 220##CR457348|TMEM53|79639|transmembrane protein 53##AK026006|TMEM53|79639|transmembrane protein 53##AK225405|TMEM53|79639|transmembrane protein 53##BC064520|TMEM53|79639|transmembrane protein 53##NM_024587|TMEM53|79639|transmembrane protein 53##AL832539|TMEM53|79639|transmembrane protein 53	0.999575	CTCF.p2:1:1.000
chr5	80461455	80461571	reg1010322.p2	10.335	+	AF023130 AF181250 TSC_hg19_v1_chr5_+_80256561	-204954	+	TSC_hg19_v1_chr5_+_80256463 BC126112 BC136296 BC143870 NM_006909	-205031	+	TSC_hg19_v1_chr5_-_79950786 BC003584 BC071996 NM_000791	-510718	-	NM_001099735 NM_001099736 NM_001825 TSC_hg19_v1_chr5_+_80529140 AK313293 BC029140 AK122769	67635	+	TSC_hg19_v1_chr5_-_80597338 AK096014	135812	-	AK092460 TSC_hg19_v1_chr5_-_80597373 AK096680	135859	-	AF023130|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF181250|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC126112|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC136296|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC143870|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_006909|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC003584|DHFR|1719|dihydrofolate reductase##BC071996|DHFR|1719|dihydrofolate reductase##NM_000791|DHFR|1719|dihydrofolate reductase##NM_001099735|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001099736|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001825|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK313293|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##BC029140|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK122769|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK096014|LOC100131067|100131067|uncharacterized LOC100131067##AK092460|LOC100131067|100131067|uncharacterized LOC100131067##AK096680|LOC100131067|100131067|uncharacterized LOC100131067	0.848078	CTCF.p2:8:0.848
chr6	123052076	123052202	reg1011185.p1	10.334	+	BC093027 TSC_hg19_v1_chr6_+_122931549 BC036011 AF087873 AK315151	-120559	+	NM_032471 NM_181795	-120763	+	NM_181794 CR749456 AJ420562	-259068	+	NM_001446 TSC_hg19_v1_chr6_+_123100743 BC012299	48560	+	AK311867 TSC_hg19_v1_chr6_+_123100861 AK289836 AK307272 AJ002962 AB208815 U51338 D50373 D88648 AL512688 U81235 CR457057 DQ891437 DQ894613 EU176601	48760	+	NM_006714	57831	+	BC093027|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##BC036011|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AF087873|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AK315151|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_032471|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_181795|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_181794|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AJ420562|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_001446|FABP7|2173|fatty acid binding protein 7, brain##BC012299|FABP7|2173|fatty acid binding protein 7, brain##AK311867|FABP7|2173|fatty acid binding protein 7, brain##AK289836|FABP7|2173|fatty acid binding protein 7, brain##AJ002962|FABP7|2173|fatty acid binding protein 7, brain##U51338|FABP7|2173|fatty acid binding protein 7, brain##D50373|FABP7|2173|fatty acid binding protein 7, brain##D88648|FABP7|2173|fatty acid binding protein 7, brain##AL512688|FABP7|2173|fatty acid binding protein 7, brain##U81235|FABP7|2173|fatty acid binding protein 7, brain##CR457057|FABP7|2173|fatty acid binding protein 7, brain##DQ891437|FABP7|2173|fatty acid binding protein 7, brain##DQ894613|FABP7|2173|fatty acid binding protein 7, brain##EU176601|FABP7|2173|fatty acid binding protein 7, brain##NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	0.863517	CTCF.p2:-14:0.864
chrX	46268350	46268487	reg1011765.p1	10.333	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	-1208305	-	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-1535982	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-1565105	+	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	38293	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	136438	-	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	136526	+	BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588	0.992506	CTCF.p2:18:0.993
chr15	41758134	41758263	reg1012644.p1	10.332	+	TSC_hg19_v1_chr15_+_41709329 NM_015138 AK292302 D87440 BC015052 AB383821	-48838	+	AF151823 BC000780 NM_016013 AK310033 AK310983 AK309889 TSC_hg19_v1_chr15_-_41694659	-63536	-	CU680432 AF305711 TSC_hg19_v1_chr15_+_41625177	-133033	+	NM_002220 TSC_hg19_v1_chr15_+_41786071 BC026331 X54938 AB463780	27892	+	BC143903 D16105 AK314006 BC045607 X60702 AK296892 NM_001135685 NM_002344 NM_206961	47840	-	AB037824 TSC_hg19_v1_chr15_-_41836456 AK290224 BC000246	78251	-	NM_015138|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK292302|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##D87440|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC015052|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF151823|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##BC000780|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##NM_016013|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK310033|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK310983|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK309889|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AF305711|NUSAP1|51203|nucleolar and spindle associated protein 1##NM_002220|ITPKA|3706|inositol-trisphosphate 3-kinase A##BC026331|ITPKA|3706|inositol-trisphosphate 3-kinase A##X54938|ITPKA|3706|inositol-trisphosphate 3-kinase A##BC143903|LTK|4058|leukocyte receptor tyrosine kinase##D16105|LTK|4058|leukocyte receptor tyrosine kinase##AK314006|LTK|4058|leukocyte receptor tyrosine kinase##BC045607|LTK|4058|leukocyte receptor tyrosine kinase##X60702|LTK|4058|leukocyte receptor tyrosine kinase##AK296892|LTK|4058|leukocyte receptor tyrosine kinase##NM_001135685|LTK|4058|leukocyte receptor tyrosine kinase##NM_002344|LTK|4058|leukocyte receptor tyrosine kinase##NM_206961|LTK|4058|leukocyte receptor tyrosine kinase##AB037824|RPAP1|26015|RNA polymerase II associated protein 1##AK290224|RPAP1|26015|RNA polymerase II associated protein 1##BC000246|RPAP1|26015|RNA polymerase II associated protein 1	0.129994	
chr5	121528737	121528860	reg1010659.p1	10.332	+	NM_001195535	-32928	+	AK057483 AY461732 NM_207317 AK290985	-63553	+	TSC_hg19_v1_chr5_-_121414058 NM_002317	-114763	-	AK299687 TSC_hg19_v1_chr5_+_121647434	118614	+	TSC_hg19_v1_chr5_+_121647890 DQ227317 NM_001242935 NM_005460 BC094759 BC040552 AK304646 AK310835 AF076929 BC033743	119060	+	BC029465 TSC_hg19_v1_chr5_-_121814783	285985	-	NM_001195535|LOC100505841|100505841|zinc finger protein 474-like##AK057483|ZNF474|133923|zinc finger protein 474##AY461732|ZNF474|133923|zinc finger protein 474##NM_207317|ZNF474|133923|zinc finger protein 474##AK290985|ZNF474|133923|zinc finger protein 474##NM_002317|LOX|4015|lysyl oxidase##AK299687|SNCAIP|9627|synuclein, alpha interacting protein##DQ227317|SNCAIP|9627|synuclein, alpha interacting protein##NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein##NM_005460|SNCAIP|9627|synuclein, alpha interacting protein##BC094759|SNCAIP|9627|synuclein, alpha interacting protein##BC040552|SNCAIP|9627|synuclein, alpha interacting protein##AK304646|SNCAIP|9627|synuclein, alpha interacting protein##AK310835|SNCAIP|9627|synuclein, alpha interacting protein##AF076929|SNCAIP|9627|synuclein, alpha interacting protein##BC033743|SNCAIP|9627|synuclein, alpha interacting protein	0.99922	CTCF.p2:-10:0.999
chr7	149973324	149973431	reg1010751.p2	10.332	+	TSC_hg19_v1_chr7_+_149571066 BX640846 AK290086 AK094602 AK098362 AK172725 DQ995344 AY037164	-402296	+	BC023225 TSC_hg19_v1_chr7_-_149570892 BC028735	-402482	-	TSC_hg19_v1_chr7_+_149570049 AF452639 AK057700 NM_001100592 NM_145230	-403335	+	AB039791 NM_001164459	26691	-	TSC_hg19_v1_chr7_+_150020443 NM_001142928 NM_023942 AK055954	47027	+	TSC_hg19_v1_chr7_+_150020552 BC001354	47199	+	BX640846|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK290086|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK094602|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK098362|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK172725|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##DQ995344|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AY037164|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##BC023225|LOC401431|401431|uncharacterized LOC401431##BC028735|LOC401431|401431|uncharacterized LOC401431##AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AB039791|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)##NM_001164459|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)##NM_001142928|LRRC61|65999|leucine rich repeat containing 61##NM_023942|LRRC61|65999|leucine rich repeat containing 61##AK055954|LRRC61|65999|leucine rich repeat containing 61##BC001354|LRRC61|65999|leucine rich repeat containing 61	0.01939	
chr7	5013569	5013707	reg1012748.p1	10.332	+	AY424288 BC037881 BC048346 TSC_hg19_v1_chr7_-_4998841 AK094524 BC067905 NM_001100600 NM_198403	-14839	-	TSC_hg19_v1_chr7_-_4923339 AK302549 AB058752 AK294745 NM_018059	-90346	-	DQ891226 DQ894411 AF218840 BC036653 NM_020144 TSC_hg19_v1_chr7_-_4901662 AK312788	-112089	-	TSC_hg19_v1_chr7_+_5013663 BC068459 AK309798 AK308526 AK311517 BX538059 AK303831 BC026736	48	+	AK293069 NM_001204456 NM_001204513 TSC_hg19_v1_chr7_+_5085490 AF226869 NM_021163	71863	+	TSC_hg19_v1_chr7_+_5229863 AL080155 NM_001033518 NM_001033519 NM_015610 NM_016003 AK024279 BC007596 AK023041	216191	+	AY424288|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC037881|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC048346|MMD2|221938|monocyte to macrophage differentiation-associated 2##AK094524|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC067905|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_001100600|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_198403|MMD2|221938|monocyte to macrophage differentiation-associated 2##AK302549|RADIL|55698|Ras association and DIL domains##AB058752|RADIL|55698|Ras association and DIL domains##AK294745|RADIL|55698|Ras association and DIL domains##NM_018059|RADIL|55698|Ras association and DIL domains##DQ891226|PAPOLB|56903|poly(A) polymerase beta (testis specific)##DQ894411|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AF218840|PAPOLB|56903|poly(A) polymerase beta (testis specific)##BC036653|PAPOLB|56903|poly(A) polymerase beta (testis specific)##NM_020144|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AK312788|PAPOLB|56903|poly(A) polymerase beta (testis specific)##BC068459|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK309798|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK308526|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK311517|RNF216P1|441191|ring finger protein 216 pseudogene 1##BX538059|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK303831|RNF216P1|441191|ring finger protein 216 pseudogene 1##BC026736|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK293069|RBAK|57786|RB-associated KRAB zinc finger##NM_001204456|RBAK|57786|RB-associated KRAB zinc finger##NM_001204513|RBAK-LOC389458|100533952|RBAK-LOC389458 readthrough##NM_021163|RBAK|57786|RB-associated KRAB zinc finger##AL080155|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033518|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033519|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_015610|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_016003|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK024279|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC007596|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK023041|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	0.298863	CTCF.p2:-11:0.299
chr8	55078846	55078971	reg1005068.p2	10.332	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-31097	+	TSC_hg19_v1_chr8_-_55014465 CR457103 CU679013 DQ891527 DQ894717 BC010397 AF077198 AF077199 AF291053 AK307277 AK313739 AF081281 AK298206 AK289400 BC008652 AF052112 NM_006330	-64410	-	TSC_hg19_v1_chr8_-_54934990 NM_006756 NM_201437	-143889	-	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	291608	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	449744	+	BC106028 AY534241 NM_052898	936106	+	BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##CR457103|LYPLA1|10434|lysophospholipase I##DQ891527|LYPLA1|10434|lysophospholipase I##DQ894717|LYPLA1|10434|lysophospholipase I##BC010397|LYPLA1|10434|lysophospholipase I##AF077198|LYPLA1|10434|lysophospholipase I##AF077199|LYPLA1|10434|lysophospholipase I##AF291053|LYPLA1|10434|lysophospholipase I##AK307277|LYPLA1|10434|lysophospholipase I##AK313739|LYPLA1|10434|lysophospholipase I##AF081281|LYPLA1|10434|lysophospholipase I##AK298206|LYPLA1|10434|lysophospholipase I##AK289400|LYPLA1|10434|lysophospholipase I##BC008652|LYPLA1|10434|lysophospholipase I##AF052112|LYPLA1|10434|lysophospholipase I##NM_006330|LYPLA1|10434|lysophospholipase I##NM_006756|TCEA1|6917|transcription elongation factor A (SII), 1##NM_201437|TCEA1|6917|transcription elongation factor A (SII), 1##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4	0.993413	CTCF.p2:8:0.993
chr11	65341704	65341835	reg1007079.p1	10.331	+	BC032373 NM_001098784 NM_001098785 NM_152832 AF052151 TSC_hg19_v1_chr11_+_65340004	-1838	+	TSC_hg19_v1_chr11_+_65337947 AB001740 NM_006396 BC014791 DQ891782 DQ894966	-3827	+	AF085877 TSC_hg19_v1_chr11_-_65337892 AK057616	-3950	-	TSC_hg19_v1_chr11_+_65343506 NM_001099409	1734	+	AF110522 AF110523 AF110524 NM_005714 NM_033347 NM_033348 NM_033455	21697	-	TSC_hg19_v1_chr11_-_65381690 U07747 BC064543 AK315557 AB209655 BC011263 L32976 AK222781 NM_002419	39924	-	BC032373|FAM89B|23625|family with sequence similarity 89, member B##NM_001098784|FAM89B|23625|family with sequence similarity 89, member B##NM_001098785|FAM89B|23625|family with sequence similarity 89, member B##NM_152832|FAM89B|23625|family with sequence similarity 89, member B##AF052151|FAM89B|23625|family with sequence similarity 89, member B##AB001740|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##NM_006396|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##BC014791|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##DQ891782|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##DQ894966|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##AF085877|LOC254100|254100|uncharacterized LOC254100##AK057616|LOC254100|254100|uncharacterized LOC254100##NM_001099409|EHBP1L1|254102|EH domain binding protein 1-like 1##AF110522|KCNK7|10089|potassium channel, subfamily K, member 7##AF110523|KCNK7|10089|potassium channel, subfamily K, member 7##AF110524|KCNK7|10089|potassium channel, subfamily K, member 7##NM_005714|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033347|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033348|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033455|KCNK7|10089|potassium channel, subfamily K, member 7##U07747|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##BC064543|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##AK315557|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##AB209655|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##BC011263|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##L32976|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##AK222781|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##NM_002419|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11	1.027715	CTCF.p2:-29:1.000
chr2	99134648	99134777	reg1011472.p1	10.331	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-73354	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-171807	+	DQ426863 NM_001079878 NM_001298 DQ067460	-172079	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	90230	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	90338	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	90358	+	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)	0.065263	
chr6	80487842	80487947	reg1010932.p2	10.330	+	TSC_hg19_v1_chr6_+_80341019 AF340151 NM_031469 BC109043 BC109044 AK311757 BC040489 AK074506 BC052987 BC060799 BC070059 AJ297972	-146820	+	TSC_hg19_v1_chr6_-_80247114 AK299314 BX648161 BC050327 NM_001122769 NM_181714	-240765	-	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	-543469	-	NM_001243308	92242	-	TSC_hg19_v1_chr6_-_80656870 CU691582 DQ891229 AF277094 BC038506 AY037298 AK310625 AK312511 AK055277 DQ426871 NM_022726	169198	-	NM_001166691 NM_003318 TSC_hg19_v1_chr6_+_80714370 AX775733 BC032858 BC000633 AK292460	226458	+	AF340151|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_031469|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109043|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109044|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK311757|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC040489|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK074506|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC052987|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC060799|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC070059|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AJ297972|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK299314|LCA5|167691|Leber congenital amaurosis 5##BX648161|LCA5|167691|Leber congenital amaurosis 5##BC050327|LCA5|167691|Leber congenital amaurosis 5##NM_001122769|LCA5|167691|Leber congenital amaurosis 5##NM_181714|LCA5|167691|Leber congenital amaurosis 5##AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7##DQ891229|ELOVL4|6785|ELOVL fatty acid elongase 4##AF277094|ELOVL4|6785|ELOVL fatty acid elongase 4##BC038506|ELOVL4|6785|ELOVL fatty acid elongase 4##AY037298|ELOVL4|6785|ELOVL fatty acid elongase 4##AK310625|ELOVL4|6785|ELOVL fatty acid elongase 4##AK312511|ELOVL4|6785|ELOVL fatty acid elongase 4##AK055277|ELOVL4|6785|ELOVL fatty acid elongase 4##DQ426871|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_022726|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_001166691|TTK|7272|TTK protein kinase##NM_003318|TTK|7272|TTK protein kinase##AX775733|TTK|7272|TTK protein kinase##BC032858|TTK|7272|TTK protein kinase##BC000633|TTK|7272|TTK protein kinase##AK292460|TTK|7272|TTK protein kinase	0.999855	CTCF.p2:10:1.000
chr8	58026377	58026488	reg1010624.p1	10.329	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-120006	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-120030	-	TSC_hg19_v1_chr8_-_57906381 BC017797	-120054	-	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	880725	+	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	1297453	+	X56088 M93133 BC101777 BC112184 NM_000780	1386275	-	AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	0.97632	CTCF.p2:13:0.976
chrX	7964583	7964713	reg1009450.p1	10.329	+	AK304586 TSC_hg19_v1_chrX_-_7895766 NM_001142389 NM_001172672	-68877	-	AK289888 U03886 NM_004650 BC020746	-69198	-	AF167081 NM_013452	-154346	+	AF167079 NM_016378	174659	-	AF167078 AF167080 NM_001001888	468222	+	X60299 TSC_hg19_v1_chrX_-_8700155	735495	-	AK304586|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001142389|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001172672|PNPLA4|8228|patatin-like phospholipase domain containing 4##AK289888|PNPLA4|8228|patatin-like phospholipase domain containing 4##U03886|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_004650|PNPLA4|8228|patatin-like phospholipase domain containing 4##BC020746|PNPLA4|8228|patatin-like phospholipase domain containing 4##AF167081|VCX|26609|variable charge, X-linked##NM_013452|VCX|26609|variable charge, X-linked##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016378|VCX2|51480|variable charge, X-linked 2##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167080|VCX3B|425054|variable charge, X-linked 3B##NM_001001888|VCX3B|425054|variable charge, X-linked 3B##X60299|KAL1|3730|Kallmann syndrome 1 sequence	0.976356	CTCF.p2:4:0.976
chr13	114216882	114216985	reg1010959.p2	10.328	+	TSC_hg19_v1_chr13_+_114145422 AK000630 AY358768	-71519	+	NM_017905 BC068515 TSC_hg19_v1_chr13_+_114145348 BC012564	-71590	+	TSC_hg19_v1_chr13_-_114145027 AK000099 AK001566 BC056669 NM_001014283	-71913	-	TSC_hg19_v1_chr13_+_114239026 AK297114	22074	+	BC036601 TSC_hg19_v1_chr13_+_114239067 BC011685 NM_007111	22140	+	AK298521 TSC_hg19_v1_chr13_+_114239635	22686	+	AK000630|TMCO3|55002|transmembrane and coiled-coil domains 3##AY358768|TMCO3|55002|transmembrane and coiled-coil domains 3##NM_017905|TMCO3|55002|transmembrane and coiled-coil domains 3##BC068515|TMCO3|55002|transmembrane and coiled-coil domains 3##BC012564|TMCO3|55002|transmembrane and coiled-coil domains 3##AK000099|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##AK001566|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##BC056669|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##NM_001014283|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##AK297114|TFDP1|7027|transcription factor Dp-1##BC036601|TFDP1|7027|transcription factor Dp-1##BC011685|TFDP1|7027|transcription factor Dp-1##NM_007111|TFDP1|7027|transcription factor Dp-1##AK298521|TFDP1|7027|transcription factor Dp-1	0.242673	CTCF.p2:-2:0.243
chr19	52018271	52018422	reg1013520.p1	10.328	+	CU690206 AY358140 AF282256 AK225931 BC035809 AK095919 NM_053003 TSC_hg19_v1_chr19_-_52005055	-13317	-	NM_033329	-14700	-	NM_001080405	-38509	+	U71382 BC140798 BC035359 AK300182 AK300170 AK308174 AK309903 D86358 D86359 NM_001177547 NM_001177548 NM_001177549 NM_001245 NM_198845 NM_198846	16654	-	NM_007147 BC007778 AK292687 BC052997 D50419	56201	+	DQ892433 AF170484 BC029896 AK225753 U71383 NM_003830	115311	-	AY358140|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AF282256|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AK225931|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##BC035809|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AK095919|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##NM_053003|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##NM_033329|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##NM_001080405|CEACAM18|729767|carcinoembryonic antigen-related cell adhesion molecule 18##U71382|SIGLEC6|946|sialic acid binding Ig-like lectin 6##BC140798|SIGLEC6|946|sialic acid binding Ig-like lectin 6##BC035359|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK300182|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK300170|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK308174|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK309903|SIGLEC6|946|sialic acid binding Ig-like lectin 6##D86358|SIGLEC6|946|sialic acid binding Ig-like lectin 6##D86359|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177547|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177548|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177549|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001245|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_198845|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_198846|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_007147|ZNF175|7728|zinc finger protein 175##BC007778|ZNF175|7728|zinc finger protein 175##AK292687|ZNF175|7728|zinc finger protein 175##BC052997|ZNF175|7728|zinc finger protein 175##D50419|ZNF175|7728|zinc finger protein 175##DQ892433|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AF170484|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##BC029896|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AK225753|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##U71383|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_003830|SIGLEC5|8778|sialic acid binding Ig-like lectin 5	0.878574	CTCF.p2:-6:0.879
chr4	70183763	70183889	reg1012491.p1	10.328	+	AF177272 AF177273 AF177274 NM_001207004 NM_053039 AB451456	-37609	+	AF016492 BC069441 BC107059 BC107060 NM_001073 AK222839 AK222872 AK292738 AK298432 BC113649	-103369	-	AK313190 TSC_hg19_v1_chr4_+_69962191 BC030974 NM_001074 BC107727 AK223142 J05428 DQ893657 DQ895814	-221612	+	AY529122 DQ895203 AF064200 AF081793 AJ005162 Y00317 BC026264 TSC_hg19_v1_chr4_-_70361624 AK292748 NM_021139	177776	-	FJ664272 FJ664273 NM_001105677	321533	-	AK314209 AK304249 NM_001252274 NM_001252275 NM_006798	335139	-	AF177272|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF177273|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF177274|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##NM_001207004|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##NM_053039|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AB451456|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF016492|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC069441|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC107059|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC107060|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##NM_001073|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##AK222839|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK222872|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK292738|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK298432|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##BC113649|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK313190|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##BC030974|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##NM_001074|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##AK223142|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##J05428|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##DQ893657|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##DQ895814|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##AY529122|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##DQ895203|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF064200|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF081793|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AJ005162|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##Y00317|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##BC026264|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AK292748|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##NM_021139|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##FJ664272|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##FJ664273|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##NM_001105677|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##AK314209|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##AK304249|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252274|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252275|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_006798|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	0.569074	CTCF.p2:-1:0.569
chr1	192775057	192775167	reg1011643.p1	10.327	+	NM_002927 NM_144766 AF030107 BC016667	-169828	+	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	-230204	+	AY643711 NM_001039152	-488991	+	BC042755 BC044742 NM_002923 TSC_hg19_v1_chr1_+_192778168 AK313668 BC007049 L13463 AY971351 AB528517 AF493926 BT007065 CR457410 CU675517 DQ893178 DQ896478	3072	+	BT006790 CU692976 AB528990 AF151828 AK225794 BC015521 TSC_hg19_v1_chr1_-_193028470 AK314445 AK316064 AK024751	253325	-	BC025369 TSC_hg19_v1_chr1_-_193028505 AK296487 AF147717 NM_001199261 NM_001199262 NM_001199263 NM_015984	253394	-	NM_002927|RGS13|6003|regulator of G-protein signaling 13##NM_144766|RGS13|6003|regulator of G-protein signaling 13##AF030107|RGS13|6003|regulator of G-protein signaling 13##BC016667|RGS13|6003|regulator of G-protein signaling 13##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21##BC042755|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC044742|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002923|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AK313668|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC007049|RGS2|5997|regulator of G-protein signaling 2, 24kDa##L13463|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AY971351|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AF493926|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT007065|RGS2|5997|regulator of G-protein signaling 2, 24kDa##CR457410|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ893178|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ896478|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT006790|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AF151828|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK225794|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##BC015521|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK314445|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK316064|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK024751|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##BC025369|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK296487|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AF147717|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##NM_001199261|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##NM_001199262|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##NM_001199263|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##NM_015984|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5	0.809532	CTCF.p2:-17:0.810
chr3	112698204	112698354	reg1010422.p2	10.327	+	AF283760 BC069661 BC069721 BC069743 AF495380 AF497548 AF497549 AF497550 BC093890 BC143393 AK304426 AK293071 AY284975 AK126349 NM_138806 NM_138939 NM_138940 NM_170780 AY358910	-4444	-	BC144504 BC144507 AY284976 AY552790 NM_001008784 NM_001199215	-133487	-	AY548106 AY548107 TSC_hg19_v1_chr3_-_112359991 BC110842 AY526612 NM_199511 NM_199512 AK304561	-338302	-	TSC_hg19_v1_chr3_+_112709777 AK292651	11499	+	NM_014170 NM_138485 BC037163 TSC_hg19_v1_chr3_+_112709842 BC000003 AF161484 BC010137 AK289611 CU691454 DQ892307 DQ895506	11543	+	TSC_hg19_v1_chr3_-_112738512 AK301161 EU831596 EU831683 EU831956 EU832050 CU688320 AL117573 BC056663 AK295165 AK304022 AK024325 AK300811 AK304083	40219	-	AF283760|CD200R1|131450|CD200 receptor 1##BC069661|CD200R1|131450|CD200 receptor 1##BC069721|CD200R1|131450|CD200 receptor 1##BC069743|CD200R1|131450|CD200 receptor 1##AF495380|CD200R1|131450|CD200 receptor 1##AF497548|CD200R1|131450|CD200 receptor 1##AF497549|CD200R1|131450|CD200 receptor 1##AF497550|CD200R1|131450|CD200 receptor 1##BC093890|CD200R1|131450|CD200 receptor 1##BC143393|CD200R1|131450|CD200 receptor 1##AK304426|CD200R1|131450|CD200 receptor 1##AK293071|CD200R1|131450|CD200 receptor 1##AY284975|CD200R1|131450|CD200 receptor 1##AK126349|CD200R1|131450|CD200 receptor 1##NM_138806|CD200R1|131450|CD200 receptor 1##NM_138939|CD200R1|131450|CD200 receptor 1##NM_138940|CD200R1|131450|CD200 receptor 1##NM_170780|CD200R1|131450|CD200 receptor 1##AY358910|CD200R1|131450|CD200 receptor 1##BC144504|CD200R1L|344807|CD200 receptor 1-like##BC144507|CD200R1L|344807|CD200 receptor 1-like##AY284976|CD200R1L|344807|CD200 receptor 1-like##AY552790|CD200R1L|344807|CD200 receptor 1-like##NM_001008784|CD200R1L|344807|CD200 receptor 1-like##NM_001199215|CD200R1L|344807|CD200 receptor 1-like##AY548106|CCDC80|151887|coiled-coil domain containing 80##AY548107|CCDC80|151887|coiled-coil domain containing 80##BC110842|CCDC80|151887|coiled-coil domain containing 80##AY526612|CCDC80|151887|coiled-coil domain containing 80##NM_199511|CCDC80|151887|coiled-coil domain containing 80##NM_199512|CCDC80|151887|coiled-coil domain containing 80##AK304561|CCDC80|151887|coiled-coil domain containing 80##AK292651|GTPBP8|29083|GTP-binding protein 8 (putative)##NM_014170|GTPBP8|29083|GTP-binding protein 8 (putative)##NM_138485|GTPBP8|29083|GTP-binding protein 8 (putative)##BC037163|GTPBP8|29083|GTP-binding protein 8 (putative)##BC000003|GTPBP8|29083|GTP-binding protein 8 (putative)##AF161484|GTPBP8|29083|GTP-binding protein 8 (putative)##BC010137|GTPBP8|29083|GTP-binding protein 8 (putative)##AK289611|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ892307|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ895506|GTPBP8|29083|GTP-binding protein 8 (putative)##AK301161|C3orf17|25871|chromosome 3 open reading frame 17##EU831596|C3orf17|25871|chromosome 3 open reading frame 17##EU831683|C3orf17|25871|chromosome 3 open reading frame 17##EU831956|C3orf17|25871|chromosome 3 open reading frame 17##EU832050|C3orf17|25871|chromosome 3 open reading frame 17##AL117573|C3orf17|25871|chromosome 3 open reading frame 17##BC056663|C3orf17|25871|chromosome 3 open reading frame 17##AK295165|C3orf17|25871|chromosome 3 open reading frame 17##AK304022|C3orf17|25871|chromosome 3 open reading frame 17##AK024325|C3orf17|25871|chromosome 3 open reading frame 17##AK300811|C3orf17|25871|chromosome 3 open reading frame 17##AK304083|C3orf17|25871|chromosome 3 open reading frame 17	0.974028	CTCF.p2:15:0.974
chr3	119539978	119540088	reg1009424.p1	10.327	+	AF084644 NM_022002 AB528010 HQ692837 HQ709177	-38453	+	BC017304 TSC_hg19_v1_chr3_+_119500947	-39088	+	AF061056 AK310789 AK223456 TSC_hg19_v1_chr3_+_119500896	-39151	+	AY123976 TSC_hg19_v1_chr3_-_119582426	42391	-	BC000251 AK290897 TSC_hg19_v1_chr3_-_119812684	272588	-	TSC_hg19_v1_chr3_-_119813270 BC012760 NM_001146156 NM_002093	273118	-	AF084644|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##NM_022002|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##HQ692837|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##HQ709177|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##BC017304|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AF061056|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AK310789|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AK223456|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AY123976|GSK3B|2932|glycogen synthase kinase 3 beta##BC000251|GSK3B|2932|glycogen synthase kinase 3 beta##AK290897|GSK3B|2932|glycogen synthase kinase 3 beta##BC012760|GSK3B|2932|glycogen synthase kinase 3 beta##NM_001146156|GSK3B|2932|glycogen synthase kinase 3 beta##NM_002093|GSK3B|2932|glycogen synthase kinase 3 beta	0.232964	CTCF.p2:-12:0.233
chr4	21770134	21770247	reg1010465.p2	10.327	+	BX648990 DQ148490 NM_001035003	-70873	-	DQ148491 NM_001035004	-223912	-	AY118170 DQ148489 NM_147183 AK290998	-464621	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	180194	-	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	747364	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	924402	+	BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##DQ148491|KCNIP4|80333|Kv channel interacting protein 4##NM_001035004|KCNIP4|80333|Kv channel interacting protein 4##AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4##NM_147182|KCNIP4|80333|Kv channel interacting protein 4##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	0.999778	CTCF.p2:6:1.000
chr1	110075585	110075695	reg1004676.p2	10.326	+	TSC_hg19_v1_chr1_-_110052350 BC040879 AK295678 NM_020703	-23306	-	NM_001134402 AK126707 NM_001134400 NM_001134403 NM_001134404 NM_182580 TSC_hg19_v1_chr1_+_110036712 AK299086 BX647509 AK096354 AK303546 BC093683 BC111999 BC143308 AK294992 AK128798	-38944	+	TSC_hg19_v1_chr1_+_110026580 BC036849 NM_153340	-49094	+	AK290027 NM_031936 AF258342	6860	+	NM_006496 TSC_hg19_v1_chr1_+_110091203	15560	+	TSC_hg19_v1_chr1_+_110091227 BC025285	15585	+	BC040879|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK295678|AMIGO1|57463|adhesion molecule with Ig-like domain 1##NM_020703|AMIGO1|57463|adhesion molecule with Ig-like domain 1##NM_001134402|CYB561D1|284613|cytochrome b-561 domain containing 1##AK126707|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134400|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134403|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134404|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_182580|CYB561D1|284613|cytochrome b-561 domain containing 1##AK299086|CYB561D1|284613|cytochrome b-561 domain containing 1##BX647509|CYB561D1|284613|cytochrome b-561 domain containing 1##AK096354|CYB561D1|284613|cytochrome b-561 domain containing 1##AK303546|CYB561D1|284613|cytochrome b-561 domain containing 1##BC093683|CYB561D1|284613|cytochrome b-561 domain containing 1##BC111999|CYB561D1|284613|cytochrome b-561 domain containing 1##BC143308|CYB561D1|284613|cytochrome b-561 domain containing 1##AK294992|CYB561D1|284613|cytochrome b-561 domain containing 1##AK128798|CYB561D1|284613|cytochrome b-561 domain containing 1##BC036849|ATXN7L2|127002|ataxin 7-like 2##NM_153340|ATXN7L2|127002|ataxin 7-like 2##AK290027|GPR61|83873|G protein-coupled receptor 61##NM_031936|GPR61|83873|G protein-coupled receptor 61##AF258342|GPR61|83873|G protein-coupled receptor 61##NM_006496|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##BC025285|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3	0.21355	CTCF.p2:11:0.214
chr1	12332255	12332376	reg1011238.p1	10.326	+	TSC_hg19_v1_chr1_+_12290088 NM_015378 NM_018156 AJ608774 AJ608775 AL162331	-42208	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	-105204	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	-105254	+	TSC_hg19_v1_chr1_+_12403045 AK057675	70755	+	DQ426869 DQ893006 DQ896252 CU678154 AF061741 AK222593 BC002730 TSC_hg19_v1_chr1_-_12677700 AK310202 AY358093 AK309282 AK312961 BX648476 NM_004753	345268	-	NM_001013630	372250	+	NM_015378|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_018156|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608774|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608775|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AL162331|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AK057675|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_001013630|AADACL4|343066|arylacetamide deacetylase-like 4	0.294081	CTCF.p2:0:0.294
chr20	3835859	3835955	reg1009577.p1	10.326	+	TSC_hg19_v1_chr20_+_3827524 NM_001206491 NM_020746 AK296897 AB097003 AK123956 AK291785 BX649084 AK023799 AX775775 BC044952 AK130992	-8411	+	TSC_hg19_v1_chr20_+_3801202 NM_001204446 NM_001204447 NM_018347 BC011985 AK002030 AK093332 BC043344	-34709	+	TSC_hg19_v1_chr20_+_3776956 S78187 Z68092 BC006395 M81934	-58902	+	AK021791 NM_024960 TSC_hg19_v1_chr20_+_3869569	33625	+	TSC_hg19_v1_chr20_+_3869593 AF494409 NM_153638	33760	+	TSC_hg19_v1_chr20_-_3869721 BC005095 BC012193	33811	-	NM_001206491|MAVS|57506|mitochondrial antiviral signaling protein##NM_020746|MAVS|57506|mitochondrial antiviral signaling protein##AK296897|MAVS|57506|mitochondrial antiviral signaling protein##AB097003|MAVS|57506|mitochondrial antiviral signaling protein##AK123956|MAVS|57506|mitochondrial antiviral signaling protein##AK291785|MAVS|57506|mitochondrial antiviral signaling protein##BX649084|MAVS|57506|mitochondrial antiviral signaling protein##AK023799|MAVS|57506|mitochondrial antiviral signaling protein##BC044952|MAVS|57506|mitochondrial antiviral signaling protein##AK130992|MAVS|57506|mitochondrial antiviral signaling protein##NM_001204446|C20orf29|55317|chromosome 20 open reading frame 29##NM_001204447|C20orf29|55317|chromosome 20 open reading frame 29##NM_018347|C20orf29|55317|chromosome 20 open reading frame 29##BC011985|C20orf29|55317|chromosome 20 open reading frame 29##AK002030|C20orf29|55317|chromosome 20 open reading frame 29##AK093332|C20orf29|55317|chromosome 20 open reading frame 29##BC043344|C20orf29|55317|chromosome 20 open reading frame 29##S78187|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##Z68092|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BC006395|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##M81934|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##AK021791|PANK2|80025|pantothenate kinase 2##NM_024960|PANK2|80025|pantothenate kinase 2##AF494409|PANK2|80025|pantothenate kinase 2##NM_153638|PANK2|80025|pantothenate kinase 2	0.2889	CTCF.p2:-5:0.289
chr4	12634811	12634945	reg1011694.p1	10.326	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-1204346	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-1948477	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-2175868	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	851073	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	851097	-	AB463932 AF009801 EU446467 BC111966 NM_001189	911197	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.979632	CTCF.p2:2:0.980
chr6	1397351	1397469	reg1011520.p1	10.326	+	NM_001452 U13220 AB463646	-7285	+	BC053850 NM_033260	-84736	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-704320	-	BC134421 NM_001453	213270	+	TSC_hg19_v1_chr6_+_1611545 BC169307	214164	+	AF040260 NM_001253846	778814	-	NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##BC169307|FOXC1|2296|forkhead box C1##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase	0.992509	CTCF.p2:-2:0.993
chr8	1840687	1840798	reg1010448.p1	10.326	+	TSC_hg19_v1_chr8_+_1772112 AB002292 NM_014629 BC112926 CR749570	-68603	+	TSC_hg19_v1_chr8_+_1712012 BC007725	-128706	+	NM_018941 TSC_hg19_v1_chr8_+_1711937 AK312486 AF123757 AF123758 AF123759 AF123760 AF123761	-128832	+	TSC_hg19_v1_chr8_+_1922078 AB018254 NM_014867	81316	+	TSC_hg19_v1_chr8_+_1949299 AY762229	108508	+	TSC_hg19_v1_chr8_+_1950340 BC169332	109610	+	AB002292|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##NM_014629|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##BC112926|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##CR749570|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##BC007725|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##NM_018941|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AK312486|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123757|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123758|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123759|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123760|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123761|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AB018254|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##NM_014867|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY762229|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##BC169332|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11	0.925413	CTCF.p2:-18:0.925
chr1	153505723	153505833	reg1010775.p2	10.325	+	BC034687 M86757 NM_002963	-72658	-	NM_001045479	-93276	-	AY189118 NM_176823	-116779	+	TSC_hg19_v1_chr1_-_153508468 AK312088 D28464	2687	-	TSC_hg19_v1_chr1_-_153508522 BC001431	2754	-	TSC_hg19_v1_chr1_-_153508622 BC009017 NM_014624	2878	-	BC034687|S100A7|6278|S100 calcium binding protein A7##M86757|S100A7|6278|S100 calcium binding protein A7##NM_002963|S100A7|6278|S100 calcium binding protein A7##NM_001045479|S100A7L2|645922|S100 calcium binding protein A7-like 2##AY189118|S100A7A|338324|S100 calcium binding protein A7A##NM_176823|S100A7A|338324|S100 calcium binding protein A7A##AK312088|S100A6|6277|S100 calcium binding protein A6##D28464|S100A6|6277|S100 calcium binding protein A6##BC001431|S100A6|6277|S100 calcium binding protein A6##BC009017|S100A6|6277|S100 calcium binding protein A6##NM_014624|S100A6|6277|S100 calcium binding protein A6	0.979222	CTCF.p2:3:0.925
chr14	68400831	68400975	reg1013551.p1	10.325	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-114383	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-117604	-	AK315462 NM_152443	-232301	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	858817	-	NM_001244698 NM_004926	859727	-	NM_001244701 AB528867	862081	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.91213	CTCF.p2:-11:0.863
chr17	18935142	18935293	reg1010802.p1	10.325	+	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-27138	-	AK057946 NM_001042450 NM_152351 AK298345 BC062617 BC034380	-79713	+	NM_001243940 AB007851 BC101670 BC101672 BC143475	-166396	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	15069	-	BC157869 NM_001129778	95564	+	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	205491	+	NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##AK057946|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001042450|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_152351|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##AK298345|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC062617|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC034380|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001243940|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AB007851|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC101670|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC101672|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC143475|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2	0.943827	CTCF.p2:17:0.944
chr19	5170562	5170680	reg1008084.p2	10.325	+	TSC_hg19_v1_chr19_+_5032899 CU687848	-137722	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-201448	+	NM_015015 TSC_hg19_v1_chr19_+_4969124	-201497	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	170173	-	AK098722 NM_181710 AK292251 BC017592	284805	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	452137	-	AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##NM_015015|KDM4B|23030|lysine (K)-specific demethylase 4B##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2	0.986139	CTCF.p2:-12:0.986
chr2	113894592	113894701	reg1009204.p2	10.325	+	TSC_hg19_v1_chr2_+_113885174 AK290926 X52015 X53296 AB529162	-9442	+	NM_173842 TSC_hg19_v1_chr2_+_113885141	-9507	+	AF043143 NM_000577 NM_173841 NM_173843 M55646 AK290898 X84348 BC009745	-19129	+	AK290045 TSC_hg19_v1_chr2_+_113931556 AB208798 NM_012455	36908	+	TSC_hg19_v1_chr2_+_113931576 BC035307 BC073151	36935	+	TSC_hg19_v1_chr2_+_113993123 AK056052 AK307781 BX537688 AK056355 AK130275	98624	+	AK290926|IL1RN|3557|interleukin 1 receptor antagonist##X52015|IL1RN|3557|interleukin 1 receptor antagonist##X53296|IL1RN|3557|interleukin 1 receptor antagonist##NM_173842|IL1RN|3557|interleukin 1 receptor antagonist##AF043143|IL1RN|3557|interleukin 1 receptor antagonist##NM_000577|IL1RN|3557|interleukin 1 receptor antagonist##NM_173841|IL1RN|3557|interleukin 1 receptor antagonist##NM_173843|IL1RN|3557|interleukin 1 receptor antagonist##M55646|IL1RN|3557|interleukin 1 receptor antagonist##AK290898|IL1RN|3557|interleukin 1 receptor antagonist##X84348|IL1RN|3557|interleukin 1 receptor antagonist##BC009745|IL1RN|3557|interleukin 1 receptor antagonist##AK290045|PSD4|23550|pleckstrin and Sec7 domain containing 4##AB208798|PSD4|23550|pleckstrin and Sec7 domain containing 4##NM_012455|PSD4|23550|pleckstrin and Sec7 domain containing 4##BC035307|PSD4|23550|pleckstrin and Sec7 domain containing 4##BC073151|PSD4|23550|pleckstrin and Sec7 domain containing 4##AK056052|LOC654433|654433|uncharacterized LOC654433##AK307781|LOC654433|654433|uncharacterized LOC654433##BX537688|LOC654433|654433|uncharacterized LOC654433##AK056355|LOC654433|654433|uncharacterized LOC654433##AK130275|LOC654433|654433|uncharacterized LOC654433	0.997877	CTCF.p2:-6:0.998
chr8	116089060	116089195	reg1012123.p1	10.325	+	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	-1639998	-	AB114605 NM_198124	-1699746	-	BC028739 AK313469 AF167082 NM_014379 AK297393	-5102161	-	TSC_hg19_v1_chr8_-_116680208 AK304046	591093	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	592038	-	TSC_hg19_v1_chr8_-_116681365 AF183810	592208	-	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I	0.973007	CTCF.p2:6:0.973
chr2	164202631	164202738	reg1010540.p2	10.324	+	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-507437	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-507560	-	TSC_hg19_v1_chr2_+_163200633 AK312349 M81637 BC005214 AB209768 AB529141 CU675051 AK295413	-1001923	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	389833	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	1222320	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	1275209	-	BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK312349|GCA|25801|grancalcin, EF-hand calcium binding protein##M81637|GCA|25801|grancalcin, EF-hand calcium binding protein##BC005214|GCA|25801|grancalcin, EF-hand calcium binding protein##AB209768|GCA|25801|grancalcin, EF-hand calcium binding protein##AK295413|GCA|25801|grancalcin, EF-hand calcium binding protein##BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14	0.9418	CTCF.p2:7:0.942
chr3	145494696	145494821	reg1010982.p1	10.324	+	NM_001134470 AK294020	-1802541	+	TSC_hg19_v1_chr3_+_143690915 BC037293	-1803768	+	NM_173552 AK315082	-1804106	+	AB527423 U84573 AK295084 TSC_hg19_v1_chr3_-_145878818	384049	-	TSC_hg19_v1_chr3_-_145878972 BC037169 AB209879	384198	-	TSC_hg19_v1_chr3_-_145879223 NM_000935 NM_182943	384493	-	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58##AK294020|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##U84573|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AK295084|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##BC037169|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AB209879|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_000935|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_182943|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2	0.92219	CTCF.p2:-7:0.922
chr1	235257250	235257376	reg1010986.p2	10.323	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-361539	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-512067	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-513455	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	34776	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	34918	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	67250	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.850241	CTCF.p2:13:0.850
chr3	134192903	134193025	reg1010242.p1	10.323	+	TSC_hg19_v1_chr3_-_134093290 AK223598 AK001343 AB023206 AK291616 NM_016201	-99599	-	TSC_hg19_v1_chr3_-_133969650 NM_001005861 NM_002958 X69970 X96588	-223338	-	TSC_hg19_v1_chr3_-_133969397 AB527382	-223500	-	AK290761 TSC_hg19_v1_chr3_-_134204548	11566	-	TSC_hg19_v1_chr3_+_134204601 NM_001042383 NM_001042384 BC014050 AK023738	11630	+	TSC_hg19_v1_chr3_-_134204828 AK026550 BC005398 AL050051 NM_001242375	11860	-	AK223598|AMOTL2|51421|angiomotin like 2##AK001343|AMOTL2|51421|angiomotin like 2##AB023206|AMOTL2|51421|angiomotin like 2##AK291616|AMOTL2|51421|angiomotin like 2##NM_016201|AMOTL2|51421|angiomotin like 2##NM_001005861|RYK|6259|RYK receptor-like tyrosine kinase##NM_002958|RYK|6259|RYK receptor-like tyrosine kinase##X69970|RYK|6259|RYK receptor-like tyrosine kinase##X96588|RYK|6259|RYK receptor-like tyrosine kinase##AK290761|ANAPC13|25847|anaphase promoting complex subunit 13##NM_001042383|CEP63|80254|centrosomal protein 63kDa##NM_001042384|CEP63|80254|centrosomal protein 63kDa##BC014050|CEP63|80254|centrosomal protein 63kDa##AK023738|CEP63|80254|centrosomal protein 63kDa##AK026550|ANAPC13|25847|anaphase promoting complex subunit 13##BC005398|ANAPC13|25847|anaphase promoting complex subunit 13##AL050051|ANAPC13|25847|anaphase promoting complex subunit 13##NM_001242375|ANAPC13|25847|anaphase promoting complex subunit 13	0.997891	CTCF.p2:8:0.998
chr3	159602734	159602889	reg1010508.p1	10.323	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	-44952	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	-45118	+	TSC_hg19_v1_chr3_+_159481881 AK309223	-120849	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	103921	+	TSC_hg19_v1_chr3_+_159943306 NM_001168214	340526	+	BC031660 TSC_hg19_v1_chr3_+_159943777	340892	+	BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##AK309223|SCHIP1|29970|schwannomin interacting protein 1##NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80##BC031660|C3orf80|401097|chromosome 3 open reading frame 80	0.624495	CTCF.p2:-32:0.624
chr12	49491919	49492026	reg1009755.p2	10.322	+	AK313360 BC033507 HQ607677 HQ607678 NM_021044	-3387	-	BC014155 BC027482 NM_144593 AK098663 AY509932 AY327412	-28204	-	AF010403 NM_003482	-42866	-	CU677167 CU678919 CU689172 DQ892407 DQ895619 TSC_hg19_v1_chr12_-_49504467 BC015015 BC031550 AB033000 AK001356	12453	-	BC008337 TSC_hg19_v1_chr12_-_49504631 AK001651 AK298026	12651	-	AY358572 AF260728 TSC_hg19_v1_chr12_-_49504681 AK310064 AK310674 NM_018113	12692	-	AK313360|DHH|50846|desert hedgehog##BC033507|DHH|50846|desert hedgehog##HQ607677|DHH|50846|desert hedgehog##HQ607678|DHH|50846|desert hedgehog##NM_021044|DHH|50846|desert hedgehog##BC014155|RHEBL1|121268|Ras homolog enriched in brain like 1##BC027482|RHEBL1|121268|Ras homolog enriched in brain like 1##NM_144593|RHEBL1|121268|Ras homolog enriched in brain like 1##AK098663|RHEBL1|121268|Ras homolog enriched in brain like 1##AY509932|RHEBL1|121268|Ras homolog enriched in brain like 1##AY327412|RHEBL1|121268|Ras homolog enriched in brain like 1##AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like##DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like##AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC008337|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK001651|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK298026|LMBR1L|55716|limb region 1 homolog (mouse)-like##AY358572|LMBR1L|55716|limb region 1 homolog (mouse)-like##AF260728|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK310064|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK310674|LMBR1L|55716|limb region 1 homolog (mouse)-like##NM_018113|LMBR1L|55716|limb region 1 homolog (mouse)-like	0.997616	CTCF.p2:-6:0.998
chr13	24040971	24041109	reg1010506.p2	10.322	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-33200	-	TSC_hg19_v1_chr13_-_23949652 AK125458	-91390	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	-285925	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	103415	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	112492	+	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	421976	+	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.914835	CTCF.p2:11:0.915
chr3	56285546	56285644	reg1008354.p2	10.322	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-763977	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-764263	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-770187	-	BC111550 BC112391 AB002376 NM_015576	216782	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	305607	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	305651	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.998779	CTCF.p2:-23:0.999
chr7	18705876	18705991	reg1011246.p1	10.322	+	TSC_hg19_v1_chr7_+_18548965 AK304343	-156964	+	NM_001204147 NM_001204148 TSC_hg19_v1_chr7_+_18548932 AK304410	-157010	+	CR749550 EU832154 EU832248 TSC_hg19_v1_chr7_+_18535882 NM_058176 NM_178425 AB385379 AY032737 AY032738 AY197371 EU832247 BC111735	-170062	+	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	451345	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	479080	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	1042713	-	AK304343|HDAC9|9734|histone deacetylase 9##NM_001204147|HDAC9|9734|histone deacetylase 9##NM_001204148|HDAC9|9734|histone deacetylase 9##AK304410|HDAC9|9734|histone deacetylase 9##CR749550|HDAC9|9734|histone deacetylase 9##EU832154|HDAC9|9734|histone deacetylase 9##EU832248|HDAC9|9734|histone deacetylase 9##NM_058176|HDAC9|9734|histone deacetylase 9##NM_178425|HDAC9|9734|histone deacetylase 9##AY032737|HDAC9|9734|histone deacetylase 9##AY032738|HDAC9|9734|histone deacetylase 9##AY197371|HDAC9|9734|histone deacetylase 9##EU832247|HDAC9|9734|histone deacetylase 9##BC111735|HDAC9|9734|histone deacetylase 9##BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor	0.999706	CTCF.p2:9:1.000
chr7	66290645	66290787	reg1013729.p1	10.322	+	TSC_hg19_v1_chr7_+_66205719 AJ250042 AK223329 AK290678	-84986	+	TSC_hg19_v1_chr7_+_66205692 BC015330	-85022	+	NM_014504 TSC_hg19_v1_chr7_+_66205645	-85072	+	TSC_hg19_v1_chr7_+_66386215 AK222774 NM_017994 BC012562 AK000961 BC008675	95460	+	TSC_hg19_v1_chr7_+_66386228 BC041764	95515	+	TSC_hg19_v1_chr7_+_66386238 BC010519	95555	+	AJ250042|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK223329|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK290678|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##BC015330|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##NM_014504|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK222774|C7orf42|55069|chromosome 7 open reading frame 42##NM_017994|C7orf42|55069|chromosome 7 open reading frame 42##BC012562|C7orf42|55069|chromosome 7 open reading frame 42##AK000961|C7orf42|55069|chromosome 7 open reading frame 42##BC008675|C7orf42|55069|chromosome 7 open reading frame 42##BC041764|C7orf42|55069|chromosome 7 open reading frame 42##BC010519|C7orf42|55069|chromosome 7 open reading frame 42	0.999728	CTCF.p2:-5:0.983
chr10	48714365	48714491	reg1013971.p1	10.321	+	D49492 AK315322 AK310360 BC028237 NM_004962 TSC_hg19_v1_chr10_-_48439183	-275349	-	EU446620 EU446952 BC074921 BC069643 TSC_hg19_v1_chr10_-_48416877 AF188285 NM_016204 AK314956	-297642	-	J03912 CU691778 BC039844 AB593121 M22453 NM_002900 DQ426897	-323493	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	92495	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	113181	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	113514	-	D49492|GDF10|2662|growth differentiation factor 10##AK315322|GDF10|2662|growth differentiation factor 10##AK310360|GDF10|2662|growth differentiation factor 10##BC028237|GDF10|2662|growth differentiation factor 10##NM_004962|GDF10|2662|growth differentiation factor 10##EU446620|GDF2|2658|growth differentiation factor 2##EU446952|GDF2|2658|growth differentiation factor 2##BC074921|GDF2|2658|growth differentiation factor 2##BC069643|GDF2|2658|growth differentiation factor 2##AF188285|GDF2|2658|growth differentiation factor 2##NM_016204|GDF2|2658|growth differentiation factor 2##AK314956|GDF2|2658|growth differentiation factor 2##J03912|RBP3|5949|retinol binding protein 3, interstitial##BC039844|RBP3|5949|retinol binding protein 3, interstitial##AB593121|RBP3|5949|retinol binding protein 3, interstitial##M22453|RBP3|5949|retinol binding protein 3, interstitial##NM_002900|RBP3|5949|retinol binding protein 3, interstitial##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	0.977962	CTCF.p2:2:0.978
chr17	17822596	17822725	reg1012319.p1	10.321	+	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	-82336	-	TSC_hg19_v1_chr17_-_17740301 U00968 BC063281	-82365	-	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	-95756	-	TSC_hg19_v1_chr17_-_17875715 AK124331 AK295111 AK301944 AK303305 AK299872 AF467441 BC051650 AK294846 NM_001033551 NM_001082968	53081	-	NM_001130090 NM_001130091 NM_001130092 NM_031294 TSC_hg19_v1_chr17_+_17876186 BC047873 AL136926 AK293011 BC040276 BC050419 BC050665 AK093317 AX748051	53540	+	AM393241 CU678578 CU689282 AB528073 AF070584 BC032126 AF052185 AY203943 TSC_hg19_v1_chr17_-_17942481 BC004114 NM_145691 AK290257 AK294487 AK296382	119743	-	BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1##U00968|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC063281|SREBF1|6720|sterol regulatory element binding transcription factor 1##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK124331|TOM1L2|146691|target of myb1-like 2 (chicken)##AK295111|TOM1L2|146691|target of myb1-like 2 (chicken)##AK301944|TOM1L2|146691|target of myb1-like 2 (chicken)##AK303305|TOM1L2|146691|target of myb1-like 2 (chicken)##AK299872|TOM1L2|146691|target of myb1-like 2 (chicken)##AF467441|TOM1L2|146691|target of myb1-like 2 (chicken)##BC051650|TOM1L2|146691|target of myb1-like 2 (chicken)##AK294846|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001033551|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001082968|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001130090|LRRC48|83450|leucine rich repeat containing 48##NM_001130091|LRRC48|83450|leucine rich repeat containing 48##NM_001130092|LRRC48|83450|leucine rich repeat containing 48##NM_031294|LRRC48|83450|leucine rich repeat containing 48##BC047873|LRRC48|83450|leucine rich repeat containing 48##AL136926|LRRC48|83450|leucine rich repeat containing 48##AK293011|LRRC48|83450|leucine rich repeat containing 48##BC040276|LRRC48|83450|leucine rich repeat containing 48##BC050419|LRRC48|83450|leucine rich repeat containing 48##BC050665|LRRC48|83450|leucine rich repeat containing 48##AK093317|LRRC48|83450|leucine rich repeat containing 48##AM393241|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF070584|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC032126|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF052185|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AY203943|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC004114|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_145691|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK290257|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK294487|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2	0.993317	CTCF.p2:25:0.993
chr3	39072423	39072536	reg1010865.p2	10.321	+	AF109737 AF150882 NM_014139	-80428	-	AF117907 NM_006514	-236979	-	M77235 NM_000335 NM_001099404 NM_001099405 NM_198056 BC051374 NM_001160160 NM_001160161	-381339	-	TSC_hg19_v1_chr3_+_39093498 AB040882 AK025513 AK297349 AK298810 AK302307 BC026353 NM_020839 BC037168 AB385469 AF468833 AL832926	21022	+	CU687304 AB527597 TSC_hg19_v1_chr3_-_39149103 BC064624 AK300271 BC103826 BC103827 BC008928	76592	-	TSC_hg19_v1_chr3_-_39149122 BC075854 AK001574 AK057043 AJ409349 NM_031899 AK303847	76647	-	AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF117907|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##NM_006514|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##M77235|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_000335|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099404|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099405|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_198056|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##BC051374|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160160|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160161|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##AB040882|WDR48|57599|WD repeat domain 48##AK025513|WDR48|57599|WD repeat domain 48##AK297349|WDR48|57599|WD repeat domain 48##AK298810|WDR48|57599|WD repeat domain 48##AK302307|WDR48|57599|WD repeat domain 48##BC026353|WDR48|57599|WD repeat domain 48##NM_020839|WDR48|57599|WD repeat domain 48##BC037168|WDR48|57599|WD repeat domain 48##AF468833|WDR48|57599|WD repeat domain 48##AL832926|WDR48|57599|WD repeat domain 48##BC064624|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK300271|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103826|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103827|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC008928|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC075854|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK001574|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK057043|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AJ409349|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##NM_031899|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK303847|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa	0.967825	CTCF.p2:14:0.968
chr12	57395327	57395450	reg1010778.p1	10.320	+	BC034761 NM_007264 Y13583	-7097	+	AF057034 NM_003708	-43989	-	AY044434 BC101551 BC101553 AK122782 NM_148897	-67272	-	BC140890 BC146867 AB002350 BC152461 TSC_hg19_v1_chr12_-_57400241 AK292468 NM_014830	4863	-	AF216586 AF186112 AX810719 AF136174 AX810703 AF537113 AF537114 AF537115 AF537116 AF537117 AF537118 AF537119 AF537120 AF537121 AY358679 BC032145 NM_001178054 NM_013251	14921	-	AF105424 AF127026 NM_005379 BC059387	48491	-	BC034761|GPR182|11318|G protein-coupled receptor 182##NM_007264|GPR182|11318|G protein-coupled receptor 182##Y13583|GPR182|11318|G protein-coupled receptor 182##AF057034|RDH16|8608|retinol dehydrogenase 16 (all-trans)##NM_003708|RDH16|8608|retinol dehydrogenase 16 (all-trans)##AY044434|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC101551|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC101553|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##AK122782|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##NM_148897|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39##BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39##AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39##BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39##AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39##NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39##AF216586|TAC3|6866|tachykinin 3##AF186112|TAC3|6866|tachykinin 3##AF537113|TAC3|6866|tachykinin 3##AF537114|TAC3|6866|tachykinin 3##AF537115|TAC3|6866|tachykinin 3##AF537116|TAC3|6866|tachykinin 3##AF537117|TAC3|6866|tachykinin 3##AF537118|TAC3|6866|tachykinin 3##AF537119|TAC3|6866|tachykinin 3##AF537120|TAC3|6866|tachykinin 3##AF537121|TAC3|6866|tachykinin 3##AY358679|TAC3|6866|tachykinin 3##BC032145|TAC3|6866|tachykinin 3##NM_001178054|TAC3|6866|tachykinin 3##NM_013251|TAC3|6866|tachykinin 3##AF105424|MYO1A|4640|myosin IA##AF127026|MYO1A|4640|myosin IA##NM_005379|MYO1A|4640|myosin IA##BC059387|MYO1A|4640|myosin IA	0.998466	CTCF.p2:6:0.998
chr15	58153378	58153498	reg1011325.p1	10.320	+	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	-154458	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	-154552	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	-269273	+	AB015228 AB015227 NM_170697	152801	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	204440	-	NM_001206897 NM_003888 NM_170696	204682	-	AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	0.998865	CTCF.p2:-9:0.999
chr17	36176031	36176149	reg1011313.p1	10.320	+	TSC_hg19_v1_chr17_-_36105051 HM116553 HM116554 HM116555 HM116556 AK290131 AK296633 AK298393 BC017714 X58840 NM_000458 NM_001165923	-71039	-	AB528419 BT007126 CR536572 DQ891528 EU176615 TSC_hg19_v1_chr17_-_36104898	-71204	-	TSC_hg19_v1_chr17_-_36003470 AF077033 AK001652 AK093661 AX748248 BC041785 NM_007010	-172613	-	NM_001123391 NM_032258 AK313329 AK302064 BC078140 BC071680 AK301823 AL136860 BC047739	107903	+	BC033670 BC047739 AL136860 AK301823 BC071680 BC078140 AK302064 AK313329 NM_001123391 NM_032258	172535	-	BC067792 TSC_hg19_v1_chr17_-_36413224	237147	-	HM116553|HNF1B|6928|HNF1 homeobox B##HM116554|HNF1B|6928|HNF1 homeobox B##HM116555|HNF1B|6928|HNF1 homeobox B##HM116556|HNF1B|6928|HNF1 homeobox B##AK290131|HNF1B|6928|HNF1 homeobox B##AK296633|HNF1B|6928|HNF1 homeobox B##AK298393|HNF1B|6928|HNF1 homeobox B##BC017714|HNF1B|6928|HNF1 homeobox B##X58840|HNF1B|6928|HNF1 homeobox B##NM_000458|HNF1B|6928|HNF1 homeobox B##NM_001165923|HNF1B|6928|HNF1 homeobox B##BT007126|HNF1B|6928|HNF1 homeobox B##CR536572|HNF1B|6928|HNF1 homeobox B##DQ891528|HNF1B|6928|HNF1 homeobox B##EU176615|HNF1B|6928|HNF1 homeobox B##AF077033|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK001652|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK093661|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC041785|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_007010|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##AK313329|TBC1D3|729873|TBC1 domain family, member 3##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##AK302064|TBC1D3|729873|TBC1 domain family, member 3##AK313329|TBC1D3|729873|TBC1 domain family, member 3##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##BC067792|LOC440434|440434|aminopeptidase puromycin sensitive pseudogene	0.947775	CTCF.p2:9:0.948
chr6	35435991	35436125	reg1010401.p2	10.320	+	AK312617 TSC_hg19_v1_chr6_+_35420152	-15903	+	TSC_hg19_v1_chr6_+_35420129 AK292522 BC046359 AF265210 NM_021922	-15930	+	TSC_hg19_v1_chr6_+_35310402 AK304482 L07592	-125649	+	NM_007104 TSC_hg19_v1_chr6_+_35436179 AK313181 AB055764 BC070216	125	+	AB082926 BC006791 U12404 TSC_hg19_v1_chr6_+_35436204 BC011366	145	+	BC010053 BC027877 BC091488 AF142482 TSC_hg19_v1_chr6_-_35464854 NM_003214	28754	-	AK312617|FANCE|2178|Fanconi anemia, complementation group E##AK292522|FANCE|2178|Fanconi anemia, complementation group E##BC046359|FANCE|2178|Fanconi anemia, complementation group E##AF265210|FANCE|2178|Fanconi anemia, complementation group E##NM_021922|FANCE|2178|Fanconi anemia, complementation group E##AK304482|PPARD|5467|peroxisome proliferator-activated receptor delta##L07592|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_007104|RPL10A|4736|ribosomal protein L10a##AK313181|RPL10A|4736|ribosomal protein L10a##BC070216|RPL10A|4736|ribosomal protein L10a##AB082926|RPL10A|4736|ribosomal protein L10a##BC006791|RPL10A|4736|ribosomal protein L10a##U12404|RPL10A|4736|ribosomal protein L10a##BC011366|RPL10A|4736|ribosomal protein L10a##BC010053|TEAD3|7005|TEA domain family member 3##BC027877|TEAD3|7005|TEA domain family member 3##BC091488|TEAD3|7005|TEA domain family member 3##AF142482|TEAD3|7005|TEA domain family member 3##NM_003214|TEAD3|7005|TEA domain family member 3	0.28501	CTCF.p2:-3:0.285
chr2	175564865	175565003	reg1013222.p1	10.319	+	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	-17180	-	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	-65637	-	TSC_hg19_v1_chr2_-_175462533 BC002914 X86019	-102453	-	TSC_hg19_v1_chr2_+_175584527 DQ895855	19644	+	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	64235	-	AK055060 NM_001206602	147376	-	BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1##AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1##X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1##DQ895855|H3F3A|3020|H3 histone, family 3A##AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1	0.699024	CTCF.p2:-27:0.699
chr4	37805129	37805248	reg1010450.p1	10.319	+	TSC_hg19_v1_chr4_-_37687999 BC039540 AK075468 NM_001085399 NM_001085400	-117215	-	AK001879 NM_018302 AK225192	-219319	+	NM_001104629 BC037906	-349613	+	TSC_hg19_v1_chr4_+_37828307 NM_018290 AL136705 AK310927	23112	+	TSC_hg19_v1_chr4_+_37828339 AK223237 AK303374 AF109360 BC010087 AK001845 AK297752 CR457274 CU679607	23155	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	87601	+	BC039540|RELL1|768211|RELT-like 1##AK075468|RELL1|768211|RELT-like 1##NM_001085399|RELL1|768211|RELT-like 1##NM_001085400|RELL1|768211|RELT-like 1##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##NM_018290|PGM2|55276|phosphoglucomutase 2##AL136705|PGM2|55276|phosphoglucomutase 2##AK310927|PGM2|55276|phosphoglucomutase 2##AK223237|PGM2|55276|phosphoglucomutase 2##AK303374|PGM2|55276|phosphoglucomutase 2##AF109360|PGM2|55276|phosphoglucomutase 2##BC010087|PGM2|55276|phosphoglucomutase 2##AK001845|PGM2|55276|phosphoglucomutase 2##AK297752|PGM2|55276|phosphoglucomutase 2##CR457274|PGM2|55276|phosphoglucomutase 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1	0.990974	CTCF.p2:-10:0.991
chr7	129469959	129470084	reg1012218.p1	10.319	+	L22454 NM_001040110	-200104	+	AK293351 TSC_hg19_v1_chr7_+_129251621 BC016925 AK290891	-218409	+	TSC_hg19_v1_chr7_+_129251531 NM_005011	-218480	+	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	122730	-	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	122788	-	TSC_hg19_v1_chr7_-_129691215 BC000190 AB463378 AJ537494 AM393415 CU679956 BC011551 AF151050 AK001317 AK022373 NM_016478	221200	-	L22454|NRF1|4899|nuclear respiratory factor 1##NM_001040110|NRF1|4899|nuclear respiratory factor 1##AK293351|NRF1|4899|nuclear respiratory factor 1##BC016925|NRF1|4899|nuclear respiratory factor 1##AK290891|NRF1|4899|nuclear respiratory factor 1##NM_005011|NRF1|4899|nuclear respiratory factor 1##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC000190|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AJ537494|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AM393415|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC011551|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AF151050|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK001317|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK022373|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_016478|ZC3HC1|51530|zinc finger, C3HC-type containing 1	0.998065	CTCF.p2:7:0.998
chr11	46511636	46511780	reg1012950.p1	10.317	+	BC119775 BC119817 AF385590 AF498918 NM_000741 BC095546 BC137535	-103577	-	NM_001012333 TSC_hg19_v1_chr11_+_46403310	-108402	+	TSC_hg19_v1_chr11_+_46403285 X55110	-108421	+	BC045609 NM_017749 AK302808	101234	-	AL834190 TSC_hg19_v1_chr11_-_46615568 AK057896 AK000301 AB051523	103827	-	AK304530 TSC_hg19_v1_chr11_-_46615589	103895	-	BC119775|CHRM4|1132|cholinergic receptor, muscarinic 4##BC119817|CHRM4|1132|cholinergic receptor, muscarinic 4##AF385590|CHRM4|1132|cholinergic receptor, muscarinic 4##AF498918|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_000741|CHRM4|1132|cholinergic receptor, muscarinic 4##BC095546|CHRM4|1132|cholinergic receptor, muscarinic 4##BC137535|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_001012333|MDK|4192|midkine (neurite growth-promoting factor 2)##X55110|MDK|4192|midkine (neurite growth-promoting factor 2)##BC045609|AMBRA1|55626|autophagy/beclin-1 regulator 1##NM_017749|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK302808|AMBRA1|55626|autophagy/beclin-1 regulator 1##AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1##AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1	0.653749	CTCF.p2:3:0.654
chr14	35891698	35891810	reg1009945.p1	10.317	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	-17830	-	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	-130111	+	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	-130183	+	AF260323 NM_032594 BC130377 BC130379 TSC_hg19_v1_chr14_+_36003369 AB037912 AK096639	111555	+	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	386393	-	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	386641	-	BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AF260323|INSM2|84684|insulinoma-associated 2##NM_032594|INSM2|84684|insulinoma-associated 2##BC130377|INSM2|84684|insulinoma-associated 2##BC130379|INSM2|84684|insulinoma-associated 2##AB037912|INSM2|84684|insulinoma-associated 2##AK096639|INSM2|84684|insulinoma-associated 2##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)	0.991241	CTCF.p2:25:0.991
chr5	170050661	170050797	reg1010634.p1	10.317	+	TSC_hg19_v1_chr5_+_169931023 BC035032 NM_001034837 NM_014592	-119694	+	BC025707 NM_004137 AK313979	-234082	-	TSC_hg19_v1_chr5_+_169816493 AK311026	-234233	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	160025	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	238202	+	TSC_hg19_v1_chr5_+_170289029 AJ271459 AJ288952 AJ288953 AJ288954 AJ288955 BC030953 AF222747 AB527205 AL832980	238293	+	BC035032|KCNIP1|30820|Kv channel interacting protein 1##NM_001034837|KCNIP1|30820|Kv channel interacting protein 1##NM_014592|KCNIP1|30820|Kv channel interacting protein 1##BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17##AJ271459|RANBP17|64901|RAN binding protein 17##AJ288952|RANBP17|64901|RAN binding protein 17##AJ288953|RANBP17|64901|RAN binding protein 17##AJ288954|RANBP17|64901|RAN binding protein 17##AJ288955|RANBP17|64901|RAN binding protein 17##BC030953|RANBP17|64901|RAN binding protein 17##AF222747|RANBP17|64901|RAN binding protein 17##AL832980|RANBP17|64901|RAN binding protein 17	0.996061	CTCF.p2:24:0.996
chr2	199161519	199161655	reg1010528.p1	10.316	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	-492217	+	NM_197970 AK302817	-510601	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-511547	-	TSC_hg19_v1_chr2_-_200213802 AK025127	1052263	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	1159215	-	TSC_hg19_v1_chr2_-_200322238 AJ438951	1160663	-	AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2##AJ438951|SATB2|23314|SATB homeobox 2	0.99984	CTCF.p2:3:1.000
chr16	22217373	22217549	reg1011040.p1	10.315	+	AK098260 AK128606 AK307544 NM_173615	-113600	+	TSC_hg19_v1_chr16_+_22019464 NM_001164579 BC027604 BC053950	-197973	+	BC039562 BC021724 BC028605 NM_173806	-205033	-	TSC_hg19_v1_chr16_+_22217630 NM_013302 AK308757 BC032665	212	+	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	91287	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	168334	-	AK098260|VWA3A|146177|von Willebrand factor A domain containing 3A##AK128606|VWA3A|146177|von Willebrand factor A domain containing 3A##AK307544|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_173615|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_001164579|C16orf52|730094|chromosome 16 open reading frame 52##BC027604|C16orf52|730094|chromosome 16 open reading frame 52##BC053950|C16orf52|730094|chromosome 16 open reading frame 52##BC039562|PDZD9|255762|PDZ domain containing 9##BC021724|PDZD9|255762|PDZ domain containing 9##BC028605|PDZD9|255762|PDZ domain containing 9##NM_173806|PDZD9|255762|PDZ domain containing 9##NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase##BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	1.672951	CTCF.p2:-32:0.678	CTCF.p2:69:0.995
chr4	88157082	88157195	reg1009822.p2	10.315	+	BC041901 TSC_hg19_v1_chr4_-_88141661 BX640727 BX538173 NM_020803 CR749265 BX640744 BX647454 BC041384	-15476	-	TSC_hg19_v1_chr4_+_87968211 AF177238 AF177239	-188887	+	TSC_hg19_v1_chr4_+_87928422 L13773 BC114930 NM_005935 AK296243 L25050 AB385236	-228817	+	HQ258364 AY268355 BC112303 BC112305 AB073347 AK292784 AY186249 AY186250 NM_001136230 NM_178135 AY358575	86887	-	AB529195 CU690256 CU679009 AF273056 AY358553 TSC_hg19_v1_chr4_-_88312322 BC014327 BC021673	155133	-	TSC_hg19_v1_chr4_-_88312341 AK075348 BC008650 BC036001 BC016367 BC011995 NM_016245	155253	-	BC041901|KLHL8|57563|kelch-like 8 (Drosophila)##BX640727|KLHL8|57563|kelch-like 8 (Drosophila)##BX538173|KLHL8|57563|kelch-like 8 (Drosophila)##NM_020803|KLHL8|57563|kelch-like 8 (Drosophila)##CR749265|KLHL8|57563|kelch-like 8 (Drosophila)##BX640744|KLHL8|57563|kelch-like 8 (Drosophila)##BX647454|KLHL8|57563|kelch-like 8 (Drosophila)##BC041384|KLHL8|57563|kelch-like 8 (Drosophila)##AF177238|AFF1|4299|AF4/FMR2 family, member 1##AF177239|AFF1|4299|AF4/FMR2 family, member 1##L13773|AFF1|4299|AF4/FMR2 family, member 1##BC114930|AFF1|4299|AF4/FMR2 family, member 1##NM_005935|AFF1|4299|AF4/FMR2 family, member 1##AK296243|AFF1|4299|AF4/FMR2 family, member 1##L25050|AFF1|4299|AF4/FMR2 family, member 1##HQ258364|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY268355|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112303|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112305|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AB073347|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AK292784|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186249|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186250|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_001136230|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_178135|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY358575|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AK075348|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC008650|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC036001|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC016367|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC011995|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##NM_016245|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	0.996309	CTCF.p2:-16:0.996
chr11	118560600	118560714	reg1000494.p1	10.314	+	AK223140 AK309565 AK091981 AK223143 AX747289 BC109206 NM_007180 AB000824	-10290	-	NM_001144758 NM_001144759 TSC_hg19_v1_chr11_+_118478332 CR749783 BC098586 AB014538 AK295819 AL832373 AK074070 AK125783	-82280	+	AB094090 NM_015157	-83445	+	BC065007 TSC_hg19_v1_chr11_-_118661679 AK313244	100976	-	TSC_hg19_v1_chr11_-_118661835 D17532	101179	-	BC039826 TSC_hg19_v1_chr11_-_118661855	101198	-	AK223140|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK309565|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK091981|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK223143|TREH|11181|trehalase (brush-border membrane glycoprotein)##BC109206|TREH|11181|trehalase (brush-border membrane glycoprotein)##NM_007180|TREH|11181|trehalase (brush-border membrane glycoprotein)##AB000824|TREH|11181|trehalase (brush-border membrane glycoprotein)##NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AB094090|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##NM_015157|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##BC065007|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK313244|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##D17532|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC039826|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	0.0	
chr19	10041673	10041794	reg1009735.p1	10.313	+	BC031971 TSC_hg19_v1_chr19_+_9946188	-95569	+	NM_006221 TSC_hg19_v1_chr19_+_9946010 AK097558 AK291074 BC002899 U49070 AF086512 AB385559 BT019331 CR407654 CU678280 DQ892978 DQ896226	-95782	+	TSC_hg19_v1_chr19_+_9938597 AK309258 AF313915 BC007053 BC110839	-103120	+	TSC_hg19_v1_chr19_-_10047187 CU679906 DQ891083 DQ894265 AF131839 BC011361 NM_058164	5391	-	TSC_hg19_v1_chr19_-_10121181 AF177941 NM_015719	79410	-	DQ426888 AF229845 NM_015725	82159	+	BC031971|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##NM_006221|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK097558|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK291074|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##BC002899|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##U49070|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AF086512|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##BT019331|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##CR407654|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##DQ892978|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##DQ896226|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK309258|UBL5|59286|ubiquitin-like 5##AF313915|UBL5|59286|ubiquitin-like 5##BC007053|UBL5|59286|ubiquitin-like 5##BC110839|UBL5|59286|ubiquitin-like 5##DQ891083|OLFM2|93145|olfactomedin 2##DQ894265|OLFM2|93145|olfactomedin 2##AF131839|OLFM2|93145|olfactomedin 2##BC011361|OLFM2|93145|olfactomedin 2##NM_058164|OLFM2|93145|olfactomedin 2##AF177941|COL5A3|50509|collagen, type V, alpha 3##NM_015719|COL5A3|50509|collagen, type V, alpha 3##AF229845|RDH8|50700|retinol dehydrogenase 8 (all-trans)##NM_015725|RDH8|50700|retinol dehydrogenase 8 (all-trans)	1.15762	CTCF.p2:-9:0.968
chr3	140582658	140582806	reg1012452.p1	10.313	+	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	-185773	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-928480	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-928714	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	78035	+	TSC_hg19_v1_chr3_+_140770412 BC051354	187746	+	AF403029 BC008324 NM_080862 AK056367	188025	+	NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.999208	CTCF.p2:20:0.999
chr7	37771917	37772028	reg1009750.p1	10.313	+	BC043356 TSC_hg19_v1_chr7_+_37723380	-48590	+	NM_001206480	-283078	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	-283417	-	AB529245 AY288420 BC120951 BC120952 NM_181791	8023	+	BC036816 NM_016616	116226	+	AF026692 BC047684 BC058911 AK313029 TSC_hg19_v1_chr7_-_37956420 AK303977 AK302357	184439	-	NM_001206480|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1##AY288420|GPR141|353345|G protein-coupled receptor 141##BC120951|GPR141|353345|G protein-coupled receptor 141##BC120952|GPR141|353345|G protein-coupled receptor 141##NM_181791|GPR141|353345|G protein-coupled receptor 141##BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##AF026692|SFRP4|6424|secreted frizzled-related protein 4##BC047684|SFRP4|6424|secreted frizzled-related protein 4##BC058911|SFRP4|6424|secreted frizzled-related protein 4##AK313029|SFRP4|6424|secreted frizzled-related protein 4##AK303977|SFRP4|6424|secreted frizzled-related protein 4##AK302357|SFRP4|6424|secreted frizzled-related protein 4	0.608978	CTCF.p2:11:0.609
chr17	40464346	40464492	reg1011110.p2	10.312	+	TSC_hg19_v1_chr17_+_40440515 AK301457 BC027036 AB208972 L41142	-23894	+	NM_003152 U43185	-24855	+	TSC_hg19_v1_chr17_-_40428410 U47686 AB208920 BC020868 BC065227 NM_012448	-35987	-	TSC_hg19_v1_chr17_-_40540461 BC014482 NM_213662 BC000627 BC029783 AK297994	75995	-	TSC_hg19_v1_chr17_-_40540493 L29277 NM_003150 NM_139276 AK301200 AK316139	76113	-	TSC_hg19_v1_chr17_-_40540580 AK291933	76173	-	AK301457|STAT5A|6776|signal transducer and activator of transcription 5A##BC027036|STAT5A|6776|signal transducer and activator of transcription 5A##AB208972|STAT5A|6776|signal transducer and activator of transcription 5A##L41142|STAT5A|6776|signal transducer and activator of transcription 5A##NM_003152|STAT5A|6776|signal transducer and activator of transcription 5A##U43185|STAT5A|6776|signal transducer and activator of transcription 5A##U47686|STAT5B|6777|signal transducer and activator of transcription 5B##AB208920|STAT5B|6777|signal transducer and activator of transcription 5B##BC020868|STAT5B|6777|signal transducer and activator of transcription 5B##BC065227|STAT5B|6777|signal transducer and activator of transcription 5B##NM_012448|STAT5B|6777|signal transducer and activator of transcription 5B##BC014482|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_213662|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC000627|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC029783|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK297994|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##L29277|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_003150|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_139276|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK301200|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK316139|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK291933|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)	0.999439	CTCF.p2:-13:0.999
chr18	43653833	43653967	reg1013213.p1	10.312	+	DQ893199 DQ893200 DQ893201 DQ893695 DQ896527 DQ896528 DQ896529 TSC_hg19_v1_chr18_-_43652247 BC035395 BC008216 NM_024430	-1692	-	AB046852 TSC_hg19_v1_chr18_-_43547294 NM_020964	-106622	-	AK172835 NM_213602 AY971516 AK290402 AK290400 AK095432	-248276	+	TSC_hg19_v1_chr18_-_43668143 AK129804	14277	-	TSC_hg19_v1_chr18_-_43669608 BC003119	15699	-	TSC_hg19_v1_chr18_-_43678228 AB463421 BT007209 CU676424 DQ890557 DQ894210 X65460	24312	-	DQ893199|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893200|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893201|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893695|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896527|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896528|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896529|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##BC035395|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##NM_024430|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##AB046852|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##NM_020964|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##AK172835|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_213602|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AY971516|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290402|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290400|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK095432|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK129804|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##BC003119|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##BT007209|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##DQ890557|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##DQ894210|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##X65460|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	0.99094	CTCF.p2:0:0.991
chr18	72364495	72364629	reg1010158.p1	10.312	+	NM_001146189 NM_001146190 NM_017757	-21644	+	TSC_hg19_v1_chr18_+_72265126 AK056288	-99431	+	TSC_hg19_v1_chr18_-_72265072 BC036588	-99502	-	TSC_hg19_v1_chr18_-_72920993 CU687330 CU689738	556439	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	556550	-	BC018081 NM_175907 TSC_hg19_v1_chr18_-_72921324	556743	-	NM_001146189|ZNF407|55628|zinc finger protein 407##NM_001146190|ZNF407|55628|zinc finger protein 407##NM_017757|ZNF407|55628|zinc finger protein 407##AK056288|ZNF407|55628|zinc finger protein 407##BC036588|LOC400657|400657|uncharacterized LOC400657##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	0.997425	CTCF.p2:-31:0.997
chr4	147164752	147164891	reg1009298.p1	10.312	+	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	-67954	+	BC033879 TSC_hg19_v1_chr4_-_146859976	-304853	-	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	-305144	-	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	278175	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	395270	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	702177	-	NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29	0.99884	CTCF.p2:-48:0.999
chr5	53785324	53785466	reg1013594.p1	10.312	+	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	-33871	+	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	-178993	-	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	-179070	-	TSC_hg19_v1_chr5_+_53813588 AK304195 NM_001145427 BC060791 BC067860 NM_001102575 NM_052870	28150	+	TSC_hg19_v1_chr5_+_53813656 BC117218 BC117220	28278	+	TSC_hg19_v1_chr5_+_53813761 AF395536	28376	+	AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3##AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AK304195|SNX18|112574|sorting nexin 18##NM_001145427|SNX18|112574|sorting nexin 18##BC060791|SNX18|112574|sorting nexin 18##BC067860|SNX18|112574|sorting nexin 18##NM_001102575|SNX18|112574|sorting nexin 18##NM_052870|SNX18|112574|sorting nexin 18##BC117218|SNX18|112574|sorting nexin 18##BC117220|SNX18|112574|sorting nexin 18##AF395536|SNX18|112574|sorting nexin 18	0.99184	CTCF.p2:1:0.992
chr9	42744679	42744809	reg1013368.p1	10.312	+	NM_001099279 NM_199244	-27511	+	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	-376386	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-789830	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	388743	-	NM_001145196	885985	-	TSC_hg19_v1_chr9_+_43684876 NM_001201380	940099	+	NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B	0.829185	CTCF.p2:-7:0.829
chr2	239172238	239172359	reg1009924.p2	10.311	+	TSC_hg19_v1_chr2_-_239148680 BC007939 AK075040 AK293111 NM_001142853 NM_018645	-23640	-	AB035179 AB463715 TSC_hg19_v1_chr2_-_239148612 AF260237	-23720	-	TSC_hg19_v1_chr2_-_239140231 AK057399	-32065	-	AB002345 AK294876 NM_022817 TSC_hg19_v1_chr2_-_239197345	24922	-	TSC_hg19_v1_chr2_+_239229037 AF242456	56761	+	TSC_hg19_v1_chr2_+_239229202 BC059174 NM_001139490 NM_015650	56877	+	BC007939|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AK075040|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AK293111|HES6|55502|hairy and enhancer of split 6 (Drosophila)##NM_001142853|HES6|55502|hairy and enhancer of split 6 (Drosophila)##NM_018645|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AB035179|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AF260237|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AK057399|LOC151174|151174|uncharacterized LOC151174##AB002345|PER2|8864|period homolog 2 (Drosophila)##AK294876|PER2|8864|period homolog 2 (Drosophila)##NM_022817|PER2|8864|period homolog 2 (Drosophila)##AF242456|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##BC059174|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##NM_001139490|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##NM_015650|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1	0.98119	CTCF.p2:4:0.981
chr7	151456751	151456856	reg1009280.p2	10.311	+	TSC_hg19_v1_chr7_-_151329284 BT007127 BC020540 AB025580 AF087875 AK314646 AK001887 NM_024429	-127523	-	TSC_hg19_v1_chr7_-_151216982 BC107705 AK125446 BC016155 NM_005614	-239818	-	TSC_hg19_v1_chr7_-_151216769 BC066307	-240034	-	BC068598 TSC_hg19_v1_chr7_-_151511929 NM_001040633	55137	-	AK074675 NM_016203	117459	-	NM_145292 AF440404 AK315667 AK093091 AX747915 BC022021 AF440400 BC025391	196695	+	BT007127|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC020540|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AB025580|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AF087875|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK314646|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK001887|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_024429|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC107705|RHEB|6009|Ras homolog enriched in brain##AK125446|RHEB|6009|Ras homolog enriched in brain##BC016155|RHEB|6009|Ras homolog enriched in brain##NM_005614|RHEB|6009|Ras homolog enriched in brain##BC066307|RHEB|6009|Ras homolog enriched in brain##BC068598|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_001040633|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK074675|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_016203|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_145292|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440404|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK315667|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK093091|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC022021|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440400|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC025391|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	0.987743	CTCF.p2:10:0.988
chr6	130257829	130257954	reg1009981.p2	10.310	+	NM_001010876	-75476	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	-226565	-	NM_000426 NM_001079823 Z26653	-1053578	+	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	81834	+	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	278564	-	AK091882 AX747235 NM_001017373	286207	-	NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3	0.822502	CTCF.p2:5:0.823
chr14	75380838	75380939	reg1009468.p2	10.309	+	TSC_hg19_v1_chr14_+_75348624 NM_001244883 NM_001933 AK289414 BX248276 AK299505 AK316463 AK300396 BC000302 BC001922 BC002735 BX248764 D16373 CR456727 CU674146 L37418 BX248774	-32263	+	BC105720 BC105721 BC105927 NM_001080408 NM_001243007	-50353	-	TSC_hg19_v1_chr14_+_75283667 BC023570	-97188	+	NM_031464	8256	-	TSC_hg19_v1_chr14_-_75389964 BC036574 AK226137 AK054800	9065	-	BX248289 NM_001207012 NM_002632	41578	-	NM_001244883|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##NM_001933|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK289414|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248276|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK299505|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK316463|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK300396|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC000302|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC001922|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC002735|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248764|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##D16373|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##CR456727|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##L37418|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248774|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC105720|PROX2|283571|prospero homeobox 2##BC105721|PROX2|283571|prospero homeobox 2##BC105927|PROX2|283571|prospero homeobox 2##NM_001080408|PROX2|283571|prospero homeobox 2##NM_001243007|PROX2|283571|prospero homeobox 2##BC023570|YLPM1|56252|YLP motif containing 1##NM_031464|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##BC036574|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK226137|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK054800|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##BX248289|PGF|5228|placental growth factor##NM_001207012|PGF|5228|placental growth factor##NM_002632|PGF|5228|placental growth factor	0.298552	CTCF.p2:-8:0.299
chr16	66929200	66929340	reg1013599.p1	10.309	+	TSC_hg19_v1_chr16_+_66914417 AK292539 NM_020786 AB037769 BC028030	-14826	+	AY075020 NM_001014435	-50430	+	AY075019 NM_005182 BC033865 DQ895264 EU176243	-50935	+	AF016272 AK225544 AK298255 AK225552 AK298334 AK313101 AK075243 AY358911 NM_001204744 NM_001204745 NM_001204746 NM_004062	23537	-	L24564 BC011645 AK290613 BC057815 NM_001128850 NM_004165	30158	-	TSC_hg19_v1_chr16_-_66968283 BC001733 BC005023 AF161467 AF151886 NM_016062	39031	-	AK292539|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##NM_020786|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##AB037769|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##BC028030|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##AY075020|CA7|766|carbonic anhydrase VII##NM_001014435|CA7|766|carbonic anhydrase VII##AY075019|CA7|766|carbonic anhydrase VII##NM_005182|CA7|766|carbonic anhydrase VII##BC033865|CA7|766|carbonic anhydrase VII##DQ895264|CA7|766|carbonic anhydrase VII##EU176243|CA7|766|carbonic anhydrase VII##AF016272|CDH16|1014|cadherin 16, KSP-cadherin##AK225544|CDH16|1014|cadherin 16, KSP-cadherin##AK298255|CDH16|1014|cadherin 16, KSP-cadherin##AK225552|CDH16|1014|cadherin 16, KSP-cadherin##AK298334|CDH16|1014|cadherin 16, KSP-cadherin##AK313101|CDH16|1014|cadherin 16, KSP-cadherin##AK075243|CDH16|1014|cadherin 16, KSP-cadherin##AY358911|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204744|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204745|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204746|CDH16|1014|cadherin 16, KSP-cadherin##NM_004062|CDH16|1014|cadherin 16, KSP-cadherin##L24564|RRAD|6236|Ras-related associated with diabetes##BC011645|RRAD|6236|Ras-related associated with diabetes##AK290613|RRAD|6236|Ras-related associated with diabetes##BC057815|RRAD|6236|Ras-related associated with diabetes##NM_001128850|RRAD|6236|Ras-related associated with diabetes##NM_004165|RRAD|6236|Ras-related associated with diabetes##BC001733|FAM96B|51647|family with sequence similarity 96, member B##BC005023|FAM96B|51647|family with sequence similarity 96, member B##AF161467|FAM96B|51647|family with sequence similarity 96, member B##AF151886|FAM96B|51647|family with sequence similarity 96, member B##NM_016062|FAM96B|51647|family with sequence similarity 96, member B	0.906719	CTCF.p2:2:0.907
chr5	137371785	137371942	reg1012142.p1	10.309	+	TSC_hg19_v1_chr5_-_137368794 NM_001101800 NM_001101801 NM_016603	-3073	-	TSC_hg19_v1_chr5_-_137368776 AK314224	-3087	-	TSC_hg19_v1_chr5_-_137368770 BC041335 BC048965	-3092	-	BC144497 AY009402 BC144001 AB057725 NM_058244 AB590697	47816	+	U90450 AK312181 AF067724 BC026182 NM_003551	103240	-	BC008039 BC008076 AB384833 AB209079 TSC_hg19_v1_chr5_-_137514319 AK310380 AK289951 AK293621 AK297756 AK299694 AK312333 AK225928 AL136823 NM_001164326 NM_006696 NM_139199	142470	-	NM_001101800|FAM13B|51306|family with sequence similarity 13, member B##NM_001101801|FAM13B|51306|family with sequence similarity 13, member B##NM_016603|FAM13B|51306|family with sequence similarity 13, member B##AK314224|FAM13B|51306|family with sequence similarity 13, member B##BC041335|FAM13B|51306|family with sequence similarity 13, member B##BC048965|FAM13B|51306|family with sequence similarity 13, member B##BC144497|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AY009402|WNT8A|7478|wingless-type MMTV integration site family, member 8A##BC144001|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AB057725|WNT8A|7478|wingless-type MMTV integration site family, member 8A##NM_058244|WNT8A|7478|wingless-type MMTV integration site family, member 8A##U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC008039|BRD8|10902|bromodomain containing 8##BC008076|BRD8|10902|bromodomain containing 8##AB209079|BRD8|10902|bromodomain containing 8##AK310380|BRD8|10902|bromodomain containing 8##AK289951|BRD8|10902|bromodomain containing 8##AK293621|BRD8|10902|bromodomain containing 8##AK297756|BRD8|10902|bromodomain containing 8##AK312333|BRD8|10902|bromodomain containing 8##AK225928|BRD8|10902|bromodomain containing 8##AL136823|BRD8|10902|bromodomain containing 8##NM_001164326|BRD8|10902|bromodomain containing 8##NM_006696|BRD8|10902|bromodomain containing 8##NM_139199|BRD8|10902|bromodomain containing 8	1.389035	CTCF.p2:20:1.000	CTCF.p2:73:0.365
chr2	177419278	177419428	reg1012665.p1	10.308	+	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-285114	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-365937	+	BC005124 NM_006898	-390549	+	BC013438 TSC_hg19_v1_chr2_-_177502718	83335	-	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	658121	+	AK311688 NM_001145412 NM_001145413	709218	-	NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##BC005124|HOXD3|3232|homeobox D3##NM_006898|HOXD3|3232|homeobox D3##BC013438|LOC375295|375295|uncharacterized LOC375295##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.989568	CTCF.p2:25:0.990
chr4	116773775	116773889	reg1011142.p1	10.308	+	BC113075 BC012326 AK289670 AB036429 NM_022569	-738851	-	NM_003360 U30930	-1230310	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-1254249	+	AK074617 BC030831 NM_152402	1232901	-	TSC_hg19_v1_chr4_+_118954764 AY358852	2180939	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	2181743	+	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.929178	CTCF.p2:3:0.929
chr7	76129311	76129425	reg1011759.p1	10.308	+	AY225124 AY225125 CU679151 DQ893264 DQ896593 NM_001102596	-19542	+	NM_001102594 NM_001102595 NM_020892 BC018555 DQ010329 AK293226 TSC_hg19_v1_chr7_+_76091025 AK023924 AB040961 BC008856 BC026059 BC093079	-38341	+	X56777 M60504 NM_001110354	-75107	+	NM_030570 NM_182684 AK290096 AY233462 BC004304 AK056760 CU678662	10488	+	TSC_hg19_v1_chr7_+_76178647 BC090058	49264	+	TSC_hg19_v1_chr7_+_76178675 BC078169	49307	+	AY225124|DTX2|113878|deltex homolog 2 (Drosophila)##AY225125|DTX2|113878|deltex homolog 2 (Drosophila)##DQ893264|DTX2|113878|deltex homolog 2 (Drosophila)##DQ896593|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102596|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102594|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102595|DTX2|113878|deltex homolog 2 (Drosophila)##NM_020892|DTX2|113878|deltex homolog 2 (Drosophila)##BC018555|DTX2|113878|deltex homolog 2 (Drosophila)##DQ010329|DTX2|113878|deltex homolog 2 (Drosophila)##AK293226|DTX2|113878|deltex homolog 2 (Drosophila)##AK023924|DTX2|113878|deltex homolog 2 (Drosophila)##AB040961|DTX2|113878|deltex homolog 2 (Drosophila)##BC008856|DTX2|113878|deltex homolog 2 (Drosophila)##BC026059|DTX2|113878|deltex homolog 2 (Drosophila)##BC093079|DTX2|113878|deltex homolog 2 (Drosophila)##X56777|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##M60504|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_001110354|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_030570|UPK3B|80761|uroplakin 3B##NM_182684|UPK3B|80761|uroplakin 3B##AK290096|UPK3B|80761|uroplakin 3B##AY233462|UPK3B|80761|uroplakin 3B##BC004304|UPK3B|80761|uroplakin 3B##AK056760|UPK3B|80761|uroplakin 3B##BC090058|LOC100133091|100133091|uncharacterized LOC100133091##BC078169|LOC100133091|100133091|uncharacterized LOC100133091	0.078749	
chr10	54539965	54540084	reg1008576.p1	10.307	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-8598	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-465909	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-1080677	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2020974	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	2818750	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	3580990	-	AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor	1.08037	CTCF.p2:26:0.998
chr6	108847991	108848121	reg1011995.p1	10.307	+	TSC_hg19_v1_chr6_+_108616194 AF520418 BC018445 NM_145315	-231917	+	TSC_hg19_v1_chr6_-_108582316 NM_003795 NM_152827	-265671	-	TSC_hg19_v1_chr6_-_108582245 BC015179 BC014580 AK289476	-265818	-	TSC_hg19_v1_chr6_+_108881027 NM_201559 BC020227 BC021224	32967	+	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	34019	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	34201	+	AF520418|LACE1|246269|lactation elevated 1##BC018445|LACE1|246269|lactation elevated 1##NM_145315|LACE1|246269|lactation elevated 1##NM_003795|SNX3|8724|sorting nexin 3##NM_152827|SNX3|8724|sorting nexin 3##BC015179|SNX3|8724|sorting nexin 3##BC014580|SNX3|8724|sorting nexin 3##AK289476|SNX3|8724|sorting nexin 3##NM_201559|FOXO3|2309|forkhead box O3##BC020227|FOXO3|2309|forkhead box O3##BC021224|FOXO3|2309|forkhead box O3##BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3	0.98328	CTCF.p2:14:0.983
chrX	3569436	3569579	reg1011958.p1	10.307	+	BC011846 BC064986 BC080586 NM_015419 TSC_hg19_v1_chrX_-_3264691	-304820	-	NM_004042 X97868	-584651	+	BC022389 NM_001201539	-609996	+	EU832357 EU832442 TSC_hg19_v1_chrX_-_3631397	61860	-	TSC_hg19_v1_chrX_-_3631619 BC041073	62035	-	TSC_hg19_v1_chrX_-_3631645 X85545	62138	-	BC011846|MXRA5|25878|matrix-remodelling associated 5##BC064986|MXRA5|25878|matrix-remodelling associated 5##BC080586|MXRA5|25878|matrix-remodelling associated 5##NM_015419|MXRA5|25878|matrix-remodelling associated 5##NM_004042|ARSF|416|arylsulfatase F##X97868|ARSF|416|arylsulfatase F##BC022389|ARSF|416|arylsulfatase F##NM_001201539|ARSF|416|arylsulfatase F##EU832357|PRKX|5613|protein kinase, X-linked##EU832442|PRKX|5613|protein kinase, X-linked##BC041073|PRKX|5613|protein kinase, X-linked##X85545|PRKX|5613|protein kinase, X-linked	0.84112	CTCF.p2:-17:0.841
chr17	72766986	72767088	reg1010739.p2	10.305	+	TSC_hg19_v1_chr17_+_72744928 AB528945	-22083	+	TSC_hg19_v1_chr17_+_72744841 AF036241	-22211	+	TSC_hg19_v1_chr17_+_72744800 BC001443	-22240	+	AL050269 AK225602 AK312958 BC004225 AK308569 BC004195 NM_015654 TSC_hg19_v1_chr17_-_72772477 AK123115	5434	-	NM_017728 AK291159 TSC_hg19_v1_chr17_+_72772637 AK296621 AK000262 AK074029 BC011552 BC037278	5619	+	AL137521 BC037584 TSC_hg19_v1_chr17_+_72832152	65071	+	AF036241|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC001443|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AL050269|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK225602|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK312958|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##BC004225|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK308569|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##BC004195|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##NM_015654|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK123115|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##NM_017728|TMEM104|54868|transmembrane protein 104##AK291159|TMEM104|54868|transmembrane protein 104##AK296621|TMEM104|54868|transmembrane protein 104##AK000262|TMEM104|54868|transmembrane protein 104##AK074029|TMEM104|54868|transmembrane protein 104##BC011552|TMEM104|54868|transmembrane protein 104##BC037278|TMEM104|54868|transmembrane protein 104##AL137521|TMEM104|54868|transmembrane protein 104	0.611398	CTCF.p2:3:0.400	CTCF.p2:-85:0.212
chr6	158018844	158018979	reg1012734.p1	10.305	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-216372	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-273694	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-274327	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	225378	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	225463	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	383976	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.641827	CTCF.p2:5:0.546
chr13	44482669	44482823	reg1012800.p1	10.304	+	AK096044 NM_153218 TSC_hg19_v1_chr13_+_44453986 BC035749	-28740	+	NM_144974 AK056408	-28921	-	NM_001128303	-29327	+	BC029067 NM_001010897 TSC_hg19_v1_chr13_+_44947983	465236	+	U35048 TSC_hg19_v1_chr13_-_45010962 AJ222700 BC105277 BC069207	528206	-	BC146664 BC146679 TSC_hg19_v1_chr13_-_45010983 BC000456 BC016867	528233	-	AK096044|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_153218|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC035749|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC029067|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##NM_001010897|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##U35048|TSC22D1|8848|TSC22 domain family, member 1##AJ222700|TSC22D1|8848|TSC22 domain family, member 1##BC105277|TSC22D1|8848|TSC22 domain family, member 1##BC069207|TSC22D1|8848|TSC22 domain family, member 1##BC146664|TSC22D1|8848|TSC22 domain family, member 1##BC146679|TSC22D1|8848|TSC22 domain family, member 1##BC000456|TSC22D1|8848|TSC22 domain family, member 1##BC016867|TSC22D1|8848|TSC22 domain family, member 1	0.992648	CTCF.p2:-25:0.974
chr5	131400514	131400621	reg1009884.p1	10.304	+	M20137 NM_000588 BC069472 BC066272 BC066273 BC066274 BC066275 BC066276 M17115 M14743 CU686832 HQ448457	-4195	+	AK314452 BC047453 NM_001205248 NM_001205251 BC026161 NM_001205250 DQ655980	-52874	-	AB385389 AB020644 TSC_hg19_v1_chr5_-_131347331 AK294291 NM_001009185 NM_001205247 NM_015256	-53266	-	M11220 NM_000758 BC113924 BC113999 BC108724 M11734 M10663 AY720441 AB591004 AF510855	8958	+	NM_001017973 NM_004199 BC017062	162376	-	TSC_hg19_v1_chr5_-_131563545 AY358970 BC025960 BC035813 BX647924 NM_001017974 NM_001142598 NM_001142599	162951	-	M20137|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##NM_000588|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC069472|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066272|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066273|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066274|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066275|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066276|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M17115|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M14743|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##HQ448457|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##AK314452|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC047453|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205248|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205251|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC026161|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205250|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##DQ655980|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##AB020644|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##AK294291|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001009185|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205247|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_015256|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##M11220|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_000758|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113924|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113999|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC108724|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M11734|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M10663|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AY720441|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AF510855|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_001017973|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_004199|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC017062|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##AY358970|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC025960|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC035813|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BX647924|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001017974|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142598|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142599|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II	0.99618	CTCF.p2:-2:0.996
chr7	95704854	95704993	reg1012822.p1	10.304	+	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	-303015	+	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	-479060	-	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-589630	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	246479	-	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	427904	-	CR456887 TSC_hg19_v1_chr7_-_96339159 AK309241 BC032782	634195	-	NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280##CR456887|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##AK309241|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##BC032782|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1	0.912278	CTCF.p2:0:0.912
chr1	15478917	15479061	reg1012848.p1	10.303	+	AY505122 NM_001017999	-206575	+	AY505121 NM_001018001	-222694	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	-228270	+	AK292184 NM_001136216 NM_001136217 TSC_hg19_v1_chr1_+_15479047	42	+	AK129922 TSC_hg19_v1_chr1_+_15479310	315	+	TSC_hg19_v1_chr1_+_15480249 AK001061 NM_001136218 NM_018022 BC000593 BC005177 AK098467	1259	+	AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AK292184|TMEM51|55092|transmembrane protein 51##NM_001136216|TMEM51|55092|transmembrane protein 51##NM_001136217|TMEM51|55092|transmembrane protein 51##AK129922|TMEM51|55092|transmembrane protein 51##AK001061|TMEM51|55092|transmembrane protein 51##NM_001136218|TMEM51|55092|transmembrane protein 51##NM_018022|TMEM51|55092|transmembrane protein 51##BC000593|TMEM51|55092|transmembrane protein 51##BC005177|TMEM51|55092|transmembrane protein 51##AK098467|TMEM51|55092|transmembrane protein 51	0.026913	
chr12	52607386	52607502	reg1009507.p1	10.303	+	BC117348 BC126393 BC038743 NM_001242696	-2881	-	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	-21700	-	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	-143646	+	NM_005556 TSC_hg19_v1_chr12_+_52626966	19518	+	TSC_hg19_v1_chr12_+_52627029 AK025881 AK128848 AF509887 AJ238246 X03212 AK128505 AK225498 BC002700 DQ892996 DQ896244 AB590146 CU678130	19599	+	AB527612 HQ258431 BC117465 BC117467 NM_002281	77829	-	BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80##BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##NM_005556|KRT7|3855|keratin 7##AK025881|KRT7|3855|keratin 7##AK128848|KRT7|3855|keratin 7##AF509887|KRT7|3855|keratin 7##AJ238246|KRT7|3855|keratin 7##X03212|KRT7|3855|keratin 7##AK128505|KRT7|3855|keratin 7##AK225498|KRT7|3855|keratin 7##BC002700|KRT7|3855|keratin 7##DQ892996|KRT7|3855|keratin 7##DQ896244|KRT7|3855|keratin 7##HQ258431|KRT81|3887|keratin 81##BC117465|KRT81|3887|keratin 81##BC117467|KRT81|3887|keratin 81##NM_002281|KRT81|3887|keratin 81	0.995471	CTCF.p2:-62:0.995
chr1	91977114	91977211	reg1009014.p1	10.303	+	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	-10481	+	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	-10743	+	TSC_hg19_v1_chr1_-_91870367 AB058637 AK294754 AK302582 AB058636 AB204867 NM_001017975	-106790	-	AK291345 BC126116 BC136295 BC143869 TSC_hg19_v1_chr1_-_92351559	374355	-	AK225799 TSC_hg19_v1_chr1_-_92351709 NM_001195683 NM_003243	374585	-	L07594 NM_001195684	394396	-	NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB058637|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK294754|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK302582|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB058636|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB204867|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001017975|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK291345|TGFBR3|7049|transforming growth factor, beta receptor III##BC126116|TGFBR3|7049|transforming growth factor, beta receptor III##BC136295|TGFBR3|7049|transforming growth factor, beta receptor III##BC143869|TGFBR3|7049|transforming growth factor, beta receptor III##AK225799|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195683|TGFBR3|7049|transforming growth factor, beta receptor III##NM_003243|TGFBR3|7049|transforming growth factor, beta receptor III##L07594|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195684|TGFBR3|7049|transforming growth factor, beta receptor III	0.988281	CTCF.p2:-9:0.988
chr19	40950784	40950883	reg1010649.p1	10.303	+	TSC_hg19_v1_chr19_-_40950243 BC050643 NM_203344	-574	-	TSC_hg19_v1_chr19_-_40950200 BC014061 AK074604	-622	-	AF192529 NM_013368	-2329	-	TSC_hg19_v1_chr19_-_40971653 BC109371 AK312137 D26308 NM_000713	20842	-	AF082075 AF311855 NM_020971	22254	+	TSC_hg19_v1_chr19_+_41036379 AF311856 NM_025213	85547	+	BC050643|SERTAD3|29946|SERTA domain containing 3##NM_203344|SERTAD3|29946|SERTA domain containing 3##BC014061|SERTAD3|29946|SERTA domain containing 3##AK074604|SERTAD3|29946|SERTA domain containing 3##AF192529|SERTAD3|29946|SERTA domain containing 3##NM_013368|SERTAD3|29946|SERTA domain containing 3##BC109371|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##AK312137|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##D26308|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##NM_000713|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##AF082075|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AF311855|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_020971|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AF311856|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_025213|SPTBN4|57731|spectrin, beta, non-erythrocytic 4	0.022852	
chr12	98960745	98960859	reg1010114.p2	10.302	+	TSC_hg19_v1_chr12_+_98909434 AK315221 U09086 S76736	-51360	+	TSC_hg19_v1_chr12_+_98909412 AB209297	-51391	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	-51395	+	TSC_hg19_v1_chr12_+_98987424 NM_002635 NM_005888 NM_213611 AK092689 BX647062	26611	+	AK074759 AK222658 AK316598 TSC_hg19_v1_chr12_+_98987463	26661	+	TSC_hg19_v1_chr12_+_98987497 BC001328 BC068067 BC006455 BC011641 X60036 BC051367 AB064666 BC004345 BC011574 BC000998 BC003504	26681	+	AK315221|TMPO|7112|thymopoietin##U09086|TMPO|7112|thymopoietin##S76736|TMPO|7112|thymopoietin##AB209297|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin##NM_002635|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##NM_005888|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##NM_213611|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AK092689|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BX647062|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AK074759|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AK222658|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AK316598|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC001328|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC068067|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC006455|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC011641|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##X60036|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC051367|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AB064666|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC004345|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC011574|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC000998|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC003504|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3	0.220139	CTCF.p2:-12:0.220
chr14	104561086	104561232	reg1012129.p1	10.302	+	AX781433 BX247999 NM_001080464 AX721044 BC035836 BC136637 AX781428 AX781429 AX781430 AX781431 AX781435	-9098	+	TSC_hg19_v1_chr14_+_104394792 NM_153046	-166376	+	AK310120 TSC_hg19_v1_chr14_-_104387867 AK309355 AK312099 AF054175 AK309499 DQ426862 NM_001127393 NM_004894	-173280	-	NM_015656	43900	+	TSC_hg19_v1_chr14_+_104605441 AB033062	44293	+	AK095913 NM_001008404 AK297818 AK309489 BC041103	484927	+	AX781433|ASPG|374569|asparaginase homolog (S. cerevisiae)##BX247999|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_001080464|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC035836|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC136637|ASPG|374569|asparaginase homolog (S. cerevisiae)##AX781435|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_153046|TDRD9|122402|tudor domain containing 9##AK310120|C14orf2|9556|chromosome 14 open reading frame 2##AK309355|C14orf2|9556|chromosome 14 open reading frame 2##AK312099|C14orf2|9556|chromosome 14 open reading frame 2##AF054175|C14orf2|9556|chromosome 14 open reading frame 2##AK309499|C14orf2|9556|chromosome 14 open reading frame 2##DQ426862|C14orf2|9556|chromosome 14 open reading frame 2##NM_001127393|C14orf2|9556|chromosome 14 open reading frame 2##NM_004894|C14orf2|9556|chromosome 14 open reading frame 2##NM_015656|KIF26A|26153|kinesin family member 26A##AB033062|KIF26A|26153|kinesin family member 26A##AK095913|C14orf180|400258|chromosome 14 open reading frame 180##NM_001008404|C14orf180|400258|chromosome 14 open reading frame 180##AK297818|C14orf180|400258|chromosome 14 open reading frame 180##AK309489|C14orf180|400258|chromosome 14 open reading frame 180##BC041103|C14orf180|400258|chromosome 14 open reading frame 180	0.999863	CTCF.p2:7:1.000
chr19	50918144	50918262	reg1010962.p1	10.302	+	NM_002691 TSC_hg19_v1_chr19_+_50887592 M80397 M81735 BC008800	-30599	+	AB209560 TSC_hg19_v1_chr19_+_50887563	-30678	+	TSC_hg19_v1_chr19_+_50879744 NM_007121 AK297978 BC047750 CR749648 U07132 BC074500 AK290855 BC033500	-38476	+	AK225720 NM_001243998 NM_001243999 NM_001244000 NM_003121 TSC_hg19_v1_chr19_+_50922194 AK225225 AK292644 AK300639 EU446656 X66079 X96998 BC007921	4001	+	BC094690 NM_004533 BC130536 BC136389 X73113 HQ258536	17981	+	AK131032 BC004941 TSC_hg19_v1_chr19_-_50979494 BC012203 AK125745	61306	-	NM_002691|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##M80397|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##M81735|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##BC008800|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##AB209560|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##NM_007121|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##AK297978|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##BC047750|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##CR749648|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##U07132|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##BC074500|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##AK290855|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##BC033500|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##AK225720|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_001243998|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_001243999|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_001244000|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_003121|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##AK225225|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##AK292644|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##AK300639|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##EU446656|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##X66079|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##X96998|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##BC007921|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_004533|MYBPC2|4606|myosin binding protein C, fast type##BC130536|MYBPC2|4606|myosin binding protein C, fast type##BC136389|MYBPC2|4606|myosin binding protein C, fast type##X73113|MYBPC2|4606|myosin binding protein C, fast type##HQ258536|MYBPC2|4606|myosin binding protein C, fast type##AK131032|FAM71E1|112703|family with sequence similarity 71, member E1##BC004941|FAM71E1|112703|family with sequence similarity 71, member E1##BC012203|FAM71E1|112703|family with sequence similarity 71, member E1##AK125745|FAM71E1|112703|family with sequence similarity 71, member E1	0.986914	CTCF.p2:-4:0.987
chr13	32593888	32594002	reg1008955.p1	10.301	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-173043	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-280232	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-819735	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	11496	+	BC146956 BC146965 NM_001136571	292144	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	295672	+	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset	0.506123	CTCF.p2:1:0.506
chr18	6219238	6219365	reg1011910.p1	10.301	+	NM_001080209	-327199	-	TSC_hg19_v1_chr18_-_5630663 BC008377	-588654	-	AF069072 AB023204 NM_012307 TSC_hg19_v1_chr18_-_5543997 AK128531	-675313	-	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	195614	-	NM_001243517	292113	+	NM_001010000 BX648684 AK308259 AK302026	615164	+	NM_001080209|TMEM200C|645369|transmembrane protein 200C##BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AF069072|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AB023204|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_012307|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AK128531|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28	0.987415	CTCF.p2:10:0.987
chr5	133747581	133747741	reg1010931.p1	10.301	+	TSC_hg19_v1_chr5_-_133747599 NM_080656	-62	-	TSC_hg19_v1_chr5_-_133747573 BC018086 BC008293	-107	-	TSC_hg19_v1_chr5_+_133707159 BC008404 BC008470 AK312012 X53251 BC005979 AB590169 DQ893113 DQ896387 BT007071 CR407634	-40465	+	TSC_hg19_v1_chr5_+_133842276 BC032795	94629	+	TSC_hg19_v1_chr5_+_133861359 AK056471 BC021962 AK292635 AK074123	113702	+	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	114144	+	NM_080656|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like##BC018086|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like##BC008293|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like##BC008404|UBE2B|7320|ubiquitin-conjugating enzyme E2B##BC008470|UBE2B|7320|ubiquitin-conjugating enzyme E2B##AK312012|UBE2B|7320|ubiquitin-conjugating enzyme E2B##X53251|UBE2B|7320|ubiquitin-conjugating enzyme E2B##BC005979|UBE2B|7320|ubiquitin-conjugating enzyme E2B##DQ893113|UBE2B|7320|ubiquitin-conjugating enzyme E2B##DQ896387|UBE2B|7320|ubiquitin-conjugating enzyme E2B##BT007071|UBE2B|7320|ubiquitin-conjugating enzyme E2B##CR407634|UBE2B|7320|ubiquitin-conjugating enzyme E2B##AK056471|PHF15|23338|PHD finger protein 15##BC021962|PHF15|23338|PHD finger protein 15##AK292635|PHF15|23338|PHD finger protein 15##AK074123|PHF15|23338|PHD finger protein 15##D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15	0.130551	
chr9	133873811	133873929	reg1011640.p1	10.301	+	AK300287 NM_001145106 TSC_hg19_v1_chr9_-_133814549	-59379	-	BC032953 NM_032843 TSC_hg19_v1_chr9_-_133814253	-59626	-	BC112892 AY358311 AK292489 TSC_hg19_v1_chr9_-_133814106	-59819	-	AF041835 NM_006059 TSC_hg19_v1_chr9_+_133884573 AK075536	10680	+	NM_001185095 NM_001185096 NM_031426 TSC_hg19_v1_chr9_+_133971890	98008	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	98088	+	AK300287|FIBCD1|84929|fibrinogen C domain containing 1##NM_001145106|FIBCD1|84929|fibrinogen C domain containing 1##BC032953|FIBCD1|84929|fibrinogen C domain containing 1##NM_032843|FIBCD1|84929|fibrinogen C domain containing 1##BC112892|FIBCD1|84929|fibrinogen C domain containing 1##AY358311|FIBCD1|84929|fibrinogen C domain containing 1##AK292489|FIBCD1|84929|fibrinogen C domain containing 1##AF041835|LAMC3|10319|laminin, gamma 3##NM_006059|LAMC3|10319|laminin, gamma 3##AK075536|LAMC3|10319|laminin, gamma 3##NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like##NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like##NM_031426|AIF1L|83543|allograft inflammatory factor 1-like##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like	1.837605	CTCF.p2:16:0.994	CTCF.p2:-30:0.844
chr3	68925381	68925513	reg1013140.p1	10.300	+	NM_213609 AK289668 AK290446 BC025746	-872042	+	AY325114 NM_001252216	-884714	+	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	-1220297	+	BC031566 TSC_hg19_v1_chr3_-_68981699 AY325117 NM_001005527 NM_182522	56270	-	TSC_hg19_v1_chr3_-_69037499 AK123213	112059	-	TSC_hg19_v1_chr3_-_69062806 BC060887 NM_173654 AK304102 BX648818	137354	-	NM_213609|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AK289668|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AK290446|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##BC025746|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AY325114|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##NM_001252216|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##BC031566|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##AY325117|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##NM_001005527|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##NM_182522|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##AK123213|C3orf64|285203|chromosome 3 open reading frame 64##BC060887|C3orf64|285203|chromosome 3 open reading frame 64##NM_173654|C3orf64|285203|chromosome 3 open reading frame 64##AK304102|C3orf64|285203|chromosome 3 open reading frame 64##BX648818|C3orf64|285203|chromosome 3 open reading frame 64	0.627896	CTCF.p2:14:0.628
chr5	169008733	169008872	reg1013163.p1	10.300	+	AB383998 AK310549 TSC_hg19_v1_chr5_-_168728144 BC142665 BC142717 AY358884 AB017169 BC098388 AB011538 BC146759 NM_003062	-280844	-	TSC_hg19_v1_chr5_-_168271862 BC023515	-736943	-	TSC_hg19_v1_chr5_-_168006609 BC013705 NM_024594	-1002287	-	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	1919	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	55442	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	55498	+	AK310549|SLIT3|6586|slit homolog 3 (Drosophila)##BC142665|SLIT3|6586|slit homolog 3 (Drosophila)##BC142717|SLIT3|6586|slit homolog 3 (Drosophila)##AY358884|SLIT3|6586|slit homolog 3 (Drosophila)##AB017169|SLIT3|6586|slit homolog 3 (Drosophila)##BC098388|SLIT3|6586|slit homolog 3 (Drosophila)##AB011538|SLIT3|6586|slit homolog 3 (Drosophila)##BC146759|SLIT3|6586|slit homolog 3 (Drosophila)##NM_003062|SLIT3|6586|slit homolog 3 (Drosophila)##BC013705|PANK3|79646|pantothenate kinase 3##NM_024594|PANK3|79646|pantothenate kinase 3##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2	0.15401	
chr18	48393296	48393421	reg1012066.p1	10.299	+	BC029860 NM_001127174	-41616	-	AB042647 AK054702 AK295666 NM_001127175 NM_001127176 NM_031939	-46993	-	TSC_hg19_v1_chr18_+_48086463 BC050299 NM_002747 AK293818 BC040493 AK295058	-306861	+	TSC_hg19_v1_chr18_+_48405434 NM_001168335 NM_002396	12076	+	TSC_hg19_v1_chr18_+_48405496 BC000147 AK313391 M55905	12185	+	TSC_hg19_v1_chr18_+_48494384 NM_018696	100992	+	BC029860|MRO|83876|maestro##NM_001127174|MRO|83876|maestro##AB042647|MRO|83876|maestro##AK054702|MRO|83876|maestro##AK295666|MRO|83876|maestro##NM_001127175|MRO|83876|maestro##NM_001127176|MRO|83876|maestro##NM_031939|MRO|83876|maestro##BC050299|MAPK4|5596|mitogen-activated protein kinase 4##NM_002747|MAPK4|5596|mitogen-activated protein kinase 4##AK293818|MAPK4|5596|mitogen-activated protein kinase 4##BC040493|MAPK4|5596|mitogen-activated protein kinase 4##AK295058|MAPK4|5596|mitogen-activated protein kinase 4##NM_001168335|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##NM_002396|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##BC000147|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##AK313391|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##M55905|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##NM_018696|ELAC1|55520|elaC homolog 1 (E. coli)	0.172965	
chr3	77304514	77304648	reg1013031.p1	10.299	+	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-215301	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-1469879	-	NM_001128223	-1470327	-	TSC_hg19_v1_chr3_-_78666943 AK025535	1362404	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	1764006	-	NM_002941	2512477	-	DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK123776|ZNF717|100131827|zinc finger protein 717##NM_001128223|ZNF717|100131827|zinc finger protein 717##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)	0.997553	CTCF.p2:7:0.998
chr4	128322037	128322133	reg1007065.p1	10.299	+	NM_024582	-2084519	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	-2688271	-	AK026960 BC063856 NM_005841	-4001412	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	232054	+	TSC_hg19_v1_chr4_+_128651573 NM_031291 AL136857 AY550240 BC022032 AB528294 AM393262 CU692468 AJ863129	329524	+	TSC_hg19_v1_chr4_+_128703445 BC040560 NM_014278	381348	+	NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##NM_031291|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AL136857|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AY550240|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC022032|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AM393262|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AJ863129|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC040560|HSPA4L|22824|heat shock 70kDa protein 4-like##NM_014278|HSPA4L|22824|heat shock 70kDa protein 4-like	0.985835	CTCF.p2:7:0.986
chrX	64671658	64671798	reg1013229.p1	10.299	+	AK022807 TSC_hg19_v1_chrX_-_64254616 NM_001178032 NM_001243804	-417091	-	TSC_hg19_v1_chrX_-_64196331 AK022918 AK123763 AK315485 AK222708 AK293570 AF270491 BC004411 AB032992 NM_001178033 NM_018684	-475379	-	TSC_hg19_v1_chrX_-_64139018 AK001547	-532687	-	BC140767 BC171781 NM_001010888 BX647241	36931	+	CU677041 TSC_hg19_v1_chrX_-_64754635 AK225059 AF116730 BC019302 BC018610 AK022587 AK097383 AK295591	82887	-	TSC_hg19_v1_chrX_-_64754668 AK074087 BC014545 NM_001170649 NM_001170650 NM_031206	82936	-	AK022807|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001178032|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001243804|ZC4H2|55906|zinc finger, C4H2 domain containing##AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing##AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing##AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing##AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing##AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing##AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing##BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing##AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing##AK001547|ZC4H2|55906|zinc finger, C4H2 domain containing##BC140767|ZC3H12B|340554|zinc finger CCCH-type containing 12B##BC171781|ZC3H12B|340554|zinc finger CCCH-type containing 12B##NM_001010888|ZC3H12B|340554|zinc finger CCCH-type containing 12B##BX647241|ZC3H12B|340554|zinc finger CCCH-type containing 12B##AK225059|LAS1L|81887|LAS1-like (S. cerevisiae)##AF116730|LAS1L|81887|LAS1-like (S. cerevisiae)##BC019302|LAS1L|81887|LAS1-like (S. cerevisiae)##BC018610|LAS1L|81887|LAS1-like (S. cerevisiae)##AK022587|LAS1L|81887|LAS1-like (S. cerevisiae)##AK097383|LAS1L|81887|LAS1-like (S. cerevisiae)##AK295591|LAS1L|81887|LAS1-like (S. cerevisiae)##AK074087|LAS1L|81887|LAS1-like (S. cerevisiae)##BC014545|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_001170649|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_001170650|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_031206|LAS1L|81887|LAS1-like (S. cerevisiae)	0.490224	CTCF.p2:14:0.490
chr1	9070210	9070344	reg1011387.p2	10.298	+	NM_001215 AK300652 BC034350 M57892 AB102863 AB103091	-64344	+	AK309177 NM_001428	-131127	-	TSC_hg19_v1_chr1_-_8938746 AK223192 BX537400 AK309291 AK315417	-131515	-	AB527336 AY571960 NM_207420	16126	-	TSC_hg19_v1_chr1_-_9117554 AF451839 AF479408	47301	-	TSC_hg19_v1_chr1_-_9129605 DQ892291 DQ895491 CU674838 AK300091	59322	-	NM_001215|CA6|765|carbonic anhydrase VI##AK300652|CA6|765|carbonic anhydrase VI##BC034350|CA6|765|carbonic anhydrase VI##M57892|CA6|765|carbonic anhydrase VI##AB102863|CA6|765|carbonic anhydrase VI##AB103091|CA6|765|carbonic anhydrase VI##AK309177|ENO1|2023|enolase 1, (alpha)##NM_001428|ENO1|2023|enolase 1, (alpha)##AK223192|ENO1|2023|enolase 1, (alpha)##BX537400|ENO1|2023|enolase 1, (alpha)##AK309291|ENO1|2023|enolase 1, (alpha)##AK315417|ENO1|2023|enolase 1, (alpha)##AY571960|SLC2A7|155184|solute carrier family 2 (facilitated glucose transporter), member 7##NM_207420|SLC2A7|155184|solute carrier family 2 (facilitated glucose transporter), member 7##AF451839|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AF479408|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892291|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ895491|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK300091|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5	0.790252	CTCF.p2:-9:0.790
chr21	38311864	38311982	reg1010853.p2	10.298	+	NM_005069 NM_009586 BC110444	-239918	+	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	-240483	+	AJ566766 NM_001146077	-363057	-	TSC_hg19_v1_chr21_-_38338991 AK307940 NM_001242784	26936	-	AJ001864 TSC_hg19_v1_chr21_-_38352974	41027	-	TSC_hg19_v1_chr21_-_38353235 NM_001242785	41317	-	NM_005069|SIM2|6493|single-minded homolog 2 (Drosophila)##NM_009586|SIM2|6493|single-minded homolog 2 (Drosophila)##BC110444|SIM2|6493|single-minded homolog 2 (Drosophila)##AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14##AK307940|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_001242784|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##AJ001864|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_001242785|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)	0.0	
chr1	28844644	28844766	reg1010468.p2	10.297	+	X12654 TSC_hg19_v1_chr1_+_28844754 NM_001048194 NM_001048195 NM_001269	-2	+	TSC_hg19_v1_chr1_+_28832555 AJ006834 AJ006835 X06130 BC012122 BC065008 BC007300 BC036903 BC006790 BC017334	-12123	+	NM_001048199 TSC_hg19_v1_chr1_+_28832500	-12207	+	TSC_hg19_v1_chr1_+_28844766 BC069198	77	+	TSC_hg19_v1_chr1_+_28879528 NM_017846 AK000510 AK309481 AK023555 AK300162 BC000680 BC039879 BC035855 AB528915	34865	+	BC064589 BC068048 AK092096 BC045792 TSC_hg19_v1_chr1_-_28908385	63665	-	X12654|RCC1|1104|regulator of chromosome condensation 1##NM_001048194|RCC1|1104|regulator of chromosome condensation 1##NM_001048195|RCC1|1104|regulator of chromosome condensation 1##NM_001269|RCC1|1104|regulator of chromosome condensation 1##AJ006834|SNHG3|8420|small nucleolar RNA host gene 3 (non-protein coding)##AJ006835|SNHG3|8420|small nucleolar RNA host gene 3 (non-protein coding)##BC012122|SNHG3|8420|small nucleolar RNA host gene 3 (non-protein coding)##BC065008|SNHG3|8420|small nucleolar RNA host gene 3 (non-protein coding)##BC006790|SNHG3|8420|small nucleolar RNA host gene 3 (non-protein coding)##BC017334|SNHG3|8420|small nucleolar RNA host gene 3 (non-protein coding)##NM_001048199|RCC1|1104|regulator of chromosome condensation 1##BC069198|RCC1|1104|regulator of chromosome condensation 1##NM_017846|TRNAU1AP|54952|tRNA selenocysteine 1 associated protein 1##AK000510|TRNAU1AP|54952|tRNA selenocysteine 1 associated protein 1##AK309481|TRNAU1AP|54952|tRNA selenocysteine 1 associated protein 1##AK023555|TRNAU1AP|54952|tRNA selenocysteine 1 associated protein 1##AK300162|TRNAU1AP|54952|tRNA selenocysteine 1 associated protein 1##BC000680|TRNAU1AP|54952|tRNA selenocysteine 1 associated protein 1##BC039879|TRNAU1AP|54952|tRNA selenocysteine 1 associated protein 1##BC035855|TRNAU1AP|54952|tRNA selenocysteine 1 associated protein 1##BC064589|SNHG12|85028|small nucleolar RNA host gene 12 (non-protein coding)##BC068048|SNHG12|85028|small nucleolar RNA host gene 12 (non-protein coding)##AK092096|SNHG12|85028|small nucleolar RNA host gene 12 (non-protein coding)##BC045792|SNHG12|85028|small nucleolar RNA host gene 12 (non-protein coding)	0.864213	CTCF.p2:-13:0.864
chr10	12306295	12306416	reg1008410.p1	10.296	+	TSC_hg19_v1_chr10_+_12238212 BC001600 AK289362 CR456966	-68129	+	TSC_hg19_v1_chr10_+_12238194 BC009598	-68156	+	TSC_hg19_v1_chr10_+_12238186 U27112 AK308790	-68173	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	85220	+	TSC_hg19_v1_chr10_+_12391709 BC035745	85362	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	85422	+	BC001600|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289362|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##CR456966|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##BC009598|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##U27112|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK308790|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID	0.998029	CTCF.p2:-17:0.998
chr17	58716228	58716352	reg1010675.p2	10.296	+	TSC_hg19_v1_chr17_+_58677710 BC016480 BC042418 BC032826 BC033893 DQ891047 EU176552 BT009780	-38601	+	TSC_hg19_v1_chr17_+_58677553 BC060877 NM_003620 AK312902 AK299773 U78305	-38746	+	AK307666 TSC_hg19_v1_chr17_-_58603582 BC018121 AF017782 D86981 NM_006380	-112753	-	TSC_hg19_v1_chr17_+_58755255 NM_001099432 NM_017679 AK304791 AK225757 BC017390 AK314744 AF361219 BC117275 BC143386 BC143387 AK025510	38923	+	TSC_hg19_v1_chr17_+_59477203 BC052566 NM_005994 AK127429 BC070054	760946	+	TSC_hg19_v1_chr17_+_59477477 U28049	761206	+	BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK307666|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##BC018121|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##AF017782|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##D86981|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##NM_006380|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##NM_001099432|BCAS3|54828|breast carcinoma amplified sequence 3##NM_017679|BCAS3|54828|breast carcinoma amplified sequence 3##AK304791|BCAS3|54828|breast carcinoma amplified sequence 3##AK225757|BCAS3|54828|breast carcinoma amplified sequence 3##BC017390|BCAS3|54828|breast carcinoma amplified sequence 3##AK314744|BCAS3|54828|breast carcinoma amplified sequence 3##AF361219|BCAS3|54828|breast carcinoma amplified sequence 3##BC117275|BCAS3|54828|breast carcinoma amplified sequence 3##BC143386|BCAS3|54828|breast carcinoma amplified sequence 3##BC143387|BCAS3|54828|breast carcinoma amplified sequence 3##AK025510|BCAS3|54828|breast carcinoma amplified sequence 3##BC052566|TBX2|6909|T-box 2##NM_005994|TBX2|6909|T-box 2##BC070054|TBX2|6909|T-box 2##U28049|TBX2|6909|T-box 2	0.993527	CTCF.p2:-2:0.994
chr2	158454042	158454168	reg1008632.p1	10.296	+	TSC_hg19_v1_chr2_-_158454049 AF525679 NM_001111031	-30	-	L06633 AB528875 CU690346 AF068836 BC036449 TSC_hg19_v1_chr2_-_158300602 AK312753 NM_004288	-153541	-	NM_001009959 AK296477	-269949	-	AB590288 CU692676 DQ895570 EU176205 AF525680 AF525681 AY127050 TSC_hg19_v1_chr2_-_158485239	31093	-	BC022530 NM_001111032 NM_001111033 NM_145259 TSC_hg19_v1_chr2_-_158485400	31292	-	BC033867 BC036748 NM_001105	277517	-	AF525679|ACVR1C|130399|activin A receptor, type IC##NM_001111031|ACVR1C|130399|activin A receptor, type IC##L06633|CYTIP|9595|cytohesin 1 interacting protein##AF068836|CYTIP|9595|cytohesin 1 interacting protein##BC036449|CYTIP|9595|cytohesin 1 interacting protein##AK312753|CYTIP|9595|cytohesin 1 interacting protein##NM_004288|CYTIP|9595|cytohesin 1 interacting protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein##DQ895570|ACVR1C|130399|activin A receptor, type IC##EU176205|ACVR1C|130399|activin A receptor, type IC##AF525680|ACVR1C|130399|activin A receptor, type IC##AF525681|ACVR1C|130399|activin A receptor, type IC##AY127050|ACVR1C|130399|activin A receptor, type IC##BC022530|ACVR1C|130399|activin A receptor, type IC##NM_001111032|ACVR1C|130399|activin A receptor, type IC##NM_001111033|ACVR1C|130399|activin A receptor, type IC##NM_145259|ACVR1C|130399|activin A receptor, type IC##BC033867|ACVR1|90|activin A receptor, type I##BC036748|ACVR1|90|activin A receptor, type I##NM_001105|ACVR1|90|activin A receptor, type I	0.992851	CTCF.p2:16:0.993
chr22	45080763	45080896	reg1010141.p1	10.296	+	AK091884 TSC_hg19_v1_chr22_+_45072964 AK055848	-7859	+	NM_001017530 NM_001198721 NM_015366	-8142	+	TSC_hg19_v1_chr22_+_45064630 AY859540 NM_001017528 NM_001017529	-16334	+	TSC_hg19_v1_chr22_+_45098090 NM_181333	17239	+	AK291564 TSC_hg19_v1_chr22_+_45098246 AF177331 AL355192 NM_181334	17424	+	AK001306 NM_001017526 NM_001198726 NM_181335 BC059382 BC067824 BC048280	67632	+	AK091884|PRR5|55615|proline rich 5 (renal)##AK055848|PRR5|55615|proline rich 5 (renal)##NM_001017530|PRR5|55615|proline rich 5 (renal)##NM_001198721|PRR5|55615|proline rich 5 (renal)##NM_015366|PRR5|55615|proline rich 5 (renal)##AY859540|PRR5|55615|proline rich 5 (renal)##NM_001017528|PRR5|55615|proline rich 5 (renal)##NM_001017529|PRR5|55615|proline rich 5 (renal)##NM_181333|PRR5|55615|proline rich 5 (renal)##AK291564|PRR5|55615|proline rich 5 (renal)##AF177331|PRR5|55615|proline rich 5 (renal)##AL355192|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181334|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##AK001306|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001017526|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001198726|ARHGAP8|23779|Rho GTPase activating protein 8##NM_181335|ARHGAP8|23779|Rho GTPase activating protein 8##BC059382|ARHGAP8|23779|Rho GTPase activating protein 8##BC067824|ARHGAP8|23779|Rho GTPase activating protein 8##BC048280|ARHGAP8|23779|Rho GTPase activating protein 8	0.998202	CTCF.p2:-31:0.998
chr1	34628887	34629005	reg1009914.p2	10.295	+	AK097707 NM_145205	-302871	+	NM_145238 AK131405 TSC_hg19_v1_chr1_+_33938251 AK290195 BC008827 BC011404	-690695	+	TSC_hg19_v1_chr1_-_33896604 AJ242730	-732338	-	TSC_hg19_v1_chr1_-_34630856 AB212622	1919	-	AY210418 NM_052896	2496	-	AK123355 NM_032884 BC007637	3653	+	AK097707|HMGB4|127540|high mobility group box 4##NM_145205|HMGB4|127540|high mobility group box 4##NM_145238|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK131405|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK290195|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC008827|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC011404|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AJ242730|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AB212622|CSMD2|114784|CUB and Sushi multiple domains 2##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2##AK123355|C1orf94|84970|chromosome 1 open reading frame 94##NM_032884|C1orf94|84970|chromosome 1 open reading frame 94##BC007637|C1orf94|84970|chromosome 1 open reading frame 94	0.0	
chr17	62487276	62487397	reg1011993.p1	10.295	+	BC040522 NM_018469 TSC_hg19_v1_chr17_-_62340654	-146682	-	TSC_hg19_v1_chr17_-_62340645 BC036672	-146689	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	-146750	-	AF177201 CU679261 TSC_hg19_v1_chr17_-_62493178 AK307801 BC009194 NM_007215	5801	-	AB451257 AB451382 BT006943 DQ890687 DQ893774 AB384902 TSC_hg19_v1_chr17_-_62502320	14947	-	TSC_hg19_v1_chr17_-_62502393 BC016027 AB209919	15046	-	BC040522|TEX2|55852|testis expressed 2##NM_018469|TEX2|55852|testis expressed 2##BC036672|TEX2|55852|testis expressed 2##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2##AF177201|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##AK307801|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##BC009194|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##NM_007215|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##AB451257|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AB451382|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##BT006943|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##DQ890687|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##DQ893774|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##BC016027|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AB209919|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	0.054386	
chr9	135777361	135777483	reg1010958.p2	10.295	+	AK075259 AJ011375 NM_018956	-23136	+	BC037402 BC050576 NM_152572	-23242	-	TSC_hg19_v1_chr9_+_135753719 BC012940	-23654	+	TSC_hg19_v1_chr9_-_135819985 BC121000 AB190910 BC047772	42551	-	TSC_hg19_v1_chr9_-_135820004 AK303030 AK308412 AK297326 AF013168 BC108668 AK299654 BC070032 NM_000368 NM_001162426 NM_001162427	42587	-	AY428733 NM_001135031 NM_004188	76675	+	AK075259|C9orf9|11092|chromosome 9 open reading frame 9##AJ011375|C9orf9|11092|chromosome 9 open reading frame 9##NM_018956|C9orf9|11092|chromosome 9 open reading frame 9##BC037402|AK8|158067|adenylate kinase 8##BC050576|AK8|158067|adenylate kinase 8##NM_152572|AK8|158067|adenylate kinase 8##BC012940|C9orf9|11092|chromosome 9 open reading frame 9##BC121000|TSC1|7248|tuberous sclerosis 1##AB190910|TSC1|7248|tuberous sclerosis 1##BC047772|TSC1|7248|tuberous sclerosis 1##AK303030|TSC1|7248|tuberous sclerosis 1##AK308412|TSC1|7248|tuberous sclerosis 1##AK297326|TSC1|7248|tuberous sclerosis 1##AF013168|TSC1|7248|tuberous sclerosis 1##BC108668|TSC1|7248|tuberous sclerosis 1##AK299654|TSC1|7248|tuberous sclerosis 1##BC070032|TSC1|7248|tuberous sclerosis 1##NM_000368|TSC1|7248|tuberous sclerosis 1##NM_001162426|TSC1|7248|tuberous sclerosis 1##NM_001162427|TSC1|7248|tuberous sclerosis 1##AY428733|GFI1B|8328|growth factor independent 1B transcription repressor##NM_001135031|GFI1B|8328|growth factor independent 1B transcription repressor##NM_004188|GFI1B|8328|growth factor independent 1B transcription repressor	0.978875	CTCF.p2:-14:0.979
chr17	65383220	65383362	reg1013769.p1	10.294	+	BC007905 NM_012417 NM_181671	-9368	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-9703	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-9882	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	330759	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	438411	+	AK293224 TSC_hg19_v1_chr17_+_65822221	438926	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.984054	CTCF.p2:-19:0.984
chr6	83765220	83765348	reg1010554.p2	10.294	+	TSC_hg19_v1_chr6_+_83073996 AK074790 NM_001166392	-691307	+	TSC_hg19_v1_chr6_+_83073565 BC037161 AK074786	-691751	+	AK291170 NM_006670	-692362	+	TSC_hg19_v1_chr6_-_83775541 BC101512 BC101538 BC143617 BC036049 AB126062 NM_198920 BC053645 AK298205 BC057845	10241	-	TSC_hg19_v1_chr6_+_83777389 BX648667 NM_001199942 NM_015018 AK094766	12113	+	AF102265 AB032081 AF180371 TSC_hg19_v1_chr6_-_83902977 AK314512 AK225363 AK001365 AK023432 BC001258 NM_001199918 NM_001199919 NM_015599	137688	-	AK074790|TPBG|7162|trophoblast glycoprotein##NM_001166392|TPBG|7162|trophoblast glycoprotein##BC037161|TPBG|7162|trophoblast glycoprotein##AK074786|TPBG|7162|trophoblast glycoprotein##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein##BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BX648667|DOPEY1|23033|dopey family member 1##NM_001199942|DOPEY1|23033|dopey family member 1##NM_015018|DOPEY1|23033|dopey family member 1##AK094766|DOPEY1|23033|dopey family member 1##AF102265|PGM3|5238|phosphoglucomutase 3##AB032081|PGM3|5238|phosphoglucomutase 3##AF180371|PGM3|5238|phosphoglucomutase 3##AK314512|PGM3|5238|phosphoglucomutase 3##AK225363|PGM3|5238|phosphoglucomutase 3##AK001365|PGM3|5238|phosphoglucomutase 3##AK023432|PGM3|5238|phosphoglucomutase 3##BC001258|PGM3|5238|phosphoglucomutase 3##NM_001199918|PGM3|5238|phosphoglucomutase 3##NM_001199919|PGM3|5238|phosphoglucomutase 3##NM_015599|PGM3|5238|phosphoglucomutase 3	0.998877	CTCF.p2:-7:0.999
chr6	84127740	84127851	reg1010663.p1	10.294	+	AK301867 NM_001199917 TSC_hg19_v1_chr6_-_83903693	-224133	-	NM_033411 TSC_hg19_v1_chr6_+_83903075 AK309249 AK295724 AK302978 AK313083	-224698	+	AF102265 AB032081 AF180371 TSC_hg19_v1_chr6_-_83902977 AK314512 AK225363 AK001365 AK023432 BC001258 NM_001199918 NM_001199919 NM_015599	-224823	-	U43944 TSC_hg19_v1_chr6_-_84140724 X77244 DQ892155 EU176687 AB528430 L34035	12897	-	TSC_hg19_v1_chr6_-_84140744 BC025246	12953	-	TSC_hg19_v1_chr6_-_84140767 AK223417 AK301875 AK289783 AK302777	12996	-	AK301867|PGM3|5238|phosphoglucomutase 3##NM_001199917|PGM3|5238|phosphoglucomutase 3##NM_033411|RWDD2A|112611|RWD domain containing 2A##AK309249|RWDD2A|112611|RWD domain containing 2A##AK295724|RWDD2A|112611|RWD domain containing 2A##AK302978|RWDD2A|112611|RWD domain containing 2A##AK313083|RWDD2A|112611|RWD domain containing 2A##AF102265|PGM3|5238|phosphoglucomutase 3##AB032081|PGM3|5238|phosphoglucomutase 3##AF180371|PGM3|5238|phosphoglucomutase 3##AK314512|PGM3|5238|phosphoglucomutase 3##AK225363|PGM3|5238|phosphoglucomutase 3##AK001365|PGM3|5238|phosphoglucomutase 3##AK023432|PGM3|5238|phosphoglucomutase 3##BC001258|PGM3|5238|phosphoglucomutase 3##NM_001199918|PGM3|5238|phosphoglucomutase 3##NM_001199919|PGM3|5238|phosphoglucomutase 3##NM_015599|PGM3|5238|phosphoglucomutase 3##U43944|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##X77244|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##DQ892155|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##EU176687|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##L34035|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##BC025246|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK223417|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK301875|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK289783|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK302777|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic	0.070975	
chr18	6886370	6886490	reg1010579.p1	10.293	+	NM_001010000 BX648684 AK308259 AK302026	-51965	+	NM_001243517	-375016	+	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	-471515	-	BC144590 NM_005559 X58531	231354	-	NM_001105581	344706	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	680887	+	NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M	0.95464	CTCF.p2:2:0.955
chr3	39540206	39540335	reg1013466.p1	10.293	+	NM_182935 BC075796 AK127034 AK290187 BC022471	-31151	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	-91128	+	BC070263 NM_002295 TSC_hg19_v1_chr3_+_39448210 BC066941 BC107567 BC005391 BC062714 D28372 AF503367 BC013827 BC050688 X15005 BC034537 BC053370 BC071968 BC010418 BC071693 BC018867 BC071969 BC073863	-92060	+	TSC_hg19_v1_chr3_+_39851138 BC092512 AK126013 AF396687 NM_015460 BC109311 BC109312	310905	+	BC031275 AK057627 AK309874 AK309698 TSC_hg19_v1_chr3_-_40351022 BC045736 BC118565 BC106900	810798	-	NM_005875 TSC_hg19_v1_chr3_+_40351187 AK223448 BC006996 AF077052	810910	+	NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA##BC070263|RPSA|3921|ribosomal protein SA##NM_002295|RPSA|3921|ribosomal protein SA##BC066941|RPSA|3921|ribosomal protein SA##BC107567|RPSA|3921|ribosomal protein SA##BC005391|RPSA|3921|ribosomal protein SA##BC062714|RPSA|3921|ribosomal protein SA##AF503367|RPSA|3921|ribosomal protein SA##BC013827|RPSA|3921|ribosomal protein SA##BC050688|RPSA|3921|ribosomal protein SA##X15005|RPSA|3921|ribosomal protein SA##BC034537|RPSA|3921|ribosomal protein SA##BC053370|RPSA|3921|ribosomal protein SA##BC071968|RPSA|3921|ribosomal protein SA##BC010418|RPSA|3921|ribosomal protein SA##BC071693|RPSA|3921|ribosomal protein SA##BC018867|RPSA|3921|ribosomal protein SA##BC071969|RPSA|3921|ribosomal protein SA##BC073863|RPSA|3921|ribosomal protein SA##BC092512|MYRIP|25924|myosin VIIA and Rab interacting protein##AK126013|MYRIP|25924|myosin VIIA and Rab interacting protein##AF396687|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_015460|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109311|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109312|MYRIP|25924|myosin VIIA and Rab interacting protein##BC031275|FLJ33065|440952|uncharacterized LOC440952##AK057627|FLJ33065|440952|uncharacterized LOC440952##AK309874|FLJ33065|440952|uncharacterized LOC440952##BC045736|FLJ33065|440952|uncharacterized LOC440952##BC118565|FLJ33065|440952|uncharacterized LOC440952##BC106900|FLJ33065|440952|uncharacterized LOC440952##NM_005875|EIF1B|10289|eukaryotic translation initiation factor 1B##AK223448|EIF1B|10289|eukaryotic translation initiation factor 1B##BC006996|EIF1B|10289|eukaryotic translation initiation factor 1B##AF077052|EIF1B|10289|eukaryotic translation initiation factor 1B	0.998046	CTCF.p2:-8:0.998
chr4	5052302	5052396	reg1010070.p1	10.293	+	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	-31203	-	TSC_hg19_v1_chr4_+_4861391 NM_002448 AK290636 M97676 BC021285	-190951	+	TSC_hg19_v1_chr4_+_4543925 BC025734	-508465	+	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	931	+	TSC_hg19_v1_chr4_+_5053464 AJ250839 NM_018401 BC038238 AB528925 DQ890554 DQ893714	1178	+	D82070 NM_005750 BC117444 BC117446 HQ258562	474620	+	AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##NM_002448|MSX1|4487|msh homeobox 1##AK290636|MSX1|4487|msh homeobox 1##M97676|MSX1|4487|msh homeobox 1##BC021285|MSX1|4487|msh homeobox 1##BC025734|LOC100507266|100507266|uncharacterized LOC100507266##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B##AJ250839|STK32B|55351|serine/threonine kinase 32B##NM_018401|STK32B|55351|serine/threonine kinase 32B##BC038238|STK32B|55351|serine/threonine kinase 32B##DQ890554|STK32B|55351|serine/threonine kinase 32B##DQ893714|STK32B|55351|serine/threonine kinase 32B##D82070|C4orf6|10141|chromosome 4 open reading frame 6##NM_005750|C4orf6|10141|chromosome 4 open reading frame 6##BC117444|C4orf6|10141|chromosome 4 open reading frame 6##BC117446|C4orf6|10141|chromosome 4 open reading frame 6##HQ258562|C4orf6|10141|chromosome 4 open reading frame 6	0.995281	CTCF.p2:-5:0.995
chr12	104451569	104451717	reg1013386.p1	10.292	+	BC022343 NM_031302 TSC_hg19_v1_chr12_-_104443943	-7714	-	AY358763 AK027310 TSC_hg19_v1_chr12_-_104443809	-7889	-	TSC_hg19_v1_chr12_+_104359670 NM_003211 AK311673 AK303631 AK309792 BC010945 BC019925 BC037557 AK313234 BC071714 AK299832 BC104477 AB590808	-91957	+	NM_013320 TSC_hg19_v1_chr12_+_104458317 AK313466 AK223342 BC006558 AF117210 BC033799 EU446491	6643	+	TSC_hg19_v1_chr12_-_104531875 X59710 BC007035 AK291934 BC005316 BC005317 AK311706 NM_006166	80314	-	TSC_hg19_v1_chr12_+_104609556 NM_001093771 AK304241 AY057105	157897	+	BC022343|GLT8D2|83468|glycosyltransferase 8 domain containing 2##NM_031302|GLT8D2|83468|glycosyltransferase 8 domain containing 2##AY358763|GLT8D2|83468|glycosyltransferase 8 domain containing 2##AK027310|GLT8D2|83468|glycosyltransferase 8 domain containing 2##NM_003211|TDG|6996|thymine-DNA glycosylase##AK311673|TDG|6996|thymine-DNA glycosylase##AK303631|TDG|6996|thymine-DNA glycosylase##AK309792|TDG|6996|thymine-DNA glycosylase##BC010945|TDG|6996|thymine-DNA glycosylase##BC019925|TDG|6996|thymine-DNA glycosylase##BC037557|TDG|6996|thymine-DNA glycosylase##AK313234|TDG|6996|thymine-DNA glycosylase##BC071714|TDG|6996|thymine-DNA glycosylase##AK299832|TDG|6996|thymine-DNA glycosylase##BC104477|TDG|6996|thymine-DNA glycosylase##NM_013320|HCFC2|29915|host cell factor C2##AK313466|HCFC2|29915|host cell factor C2##AK223342|HCFC2|29915|host cell factor C2##BC006558|HCFC2|29915|host cell factor C2##AF117210|HCFC2|29915|host cell factor C2##BC033799|HCFC2|29915|host cell factor C2##EU446491|HCFC2|29915|host cell factor C2##X59710|NFYB|4801|nuclear transcription factor Y, beta##BC007035|NFYB|4801|nuclear transcription factor Y, beta##AK291934|NFYB|4801|nuclear transcription factor Y, beta##BC005316|NFYB|4801|nuclear transcription factor Y, beta##BC005317|NFYB|4801|nuclear transcription factor Y, beta##AK311706|NFYB|4801|nuclear transcription factor Y, beta##NM_006166|NFYB|4801|nuclear transcription factor Y, beta##NM_001093771|TXNRD1|7296|thioredoxin reductase 1##AK304241|TXNRD1|7296|thioredoxin reductase 1##AY057105|TXNRD1|7296|thioredoxin reductase 1	0.271912	CTCF.p2:2:0.272
chr13	28443417	28443528	reg1010793.p2	10.292	+	AB044157 NM_145657 AB463700	-76671	+	AK000623 TSC_hg19_v1_chr13_+_28196032 AB464657 AB527907 CU677257	-247398	+	TSC_hg19_v1_chr13_+_28196028 AF077044 AK097973 AK311833	-247446	+	TSC_hg19_v1_chr13_+_28494136 NM_000209 X99894 U30329 U35632 AB464648	50732	+	CU677005 AB463470 DQ893626 EU176674 U51096 TSC_hg19_v1_chr13_-_28543282	99740	-	TSC_hg19_v1_chr13_-_28543325 BC014461 NM_001265	99836	-	AB044157|GSX1|219409|GS homeobox 1##NM_145657|GSX1|219409|GS homeobox 1##AK000623|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AF077044|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK097973|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK311833|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##NM_000209|PDX1|3651|pancreatic and duodenal homeobox 1##X99894|PDX1|3651|pancreatic and duodenal homeobox 1##U30329|PDX1|3651|pancreatic and duodenal homeobox 1##U35632|PDX1|3651|pancreatic and duodenal homeobox 1##DQ893626|CDX2|1045|caudal type homeobox 2##EU176674|CDX2|1045|caudal type homeobox 2##U51096|CDX2|1045|caudal type homeobox 2##BC014461|CDX2|1045|caudal type homeobox 2##NM_001265|CDX2|1045|caudal type homeobox 2	0.53793	CTCF.p2:-6:0.538
chr19	14583081	14583224	reg1013074.p1	10.292	+	TSC_hg19_v1_chr19_+_14551088 AK292130 AB527818	-31995	+	TSC_hg19_v1_chr19_+_14551082 NM_213560	-32070	+	TSC_hg19_v1_chr19_+_14551079 AK123007	-32087	+	BC039034 TSC_hg19_v1_chr19_-_14586139 L22647 BC029768	2990	-	TSC_hg19_v1_chr19_-_14586167 BC051286 NM_000955	3016	-	TSC_hg19_v1_chr19_-_14606928 AF089816 AK290252 AK290948 BC000410 BC012810 BC016169	23763	-	AK292130|PKN1|5585|protein kinase N1##NM_213560|PKN1|5585|protein kinase N1##AK123007|PKN1|5585|protein kinase N1##BC039034|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##L22647|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##BC029768|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##BC051286|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##NM_000955|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##AF089816|GIPC1|10755|GIPC PDZ domain containing family, member 1##AK290252|GIPC1|10755|GIPC PDZ domain containing family, member 1##AK290948|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC000410|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC012810|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC016169|GIPC1|10755|GIPC PDZ domain containing family, member 1	0.976088	CTCF.p2:9:0.976
chr22	38213742	38213886	reg1012746.p1	10.292	+	TSC_hg19_v1_chr22_+_38203942 NM_001171690 NM_014291 AK290093 AK123190 BC014457 AF077740 CU677003	-9864	+	TSC_hg19_v1_chr22_+_38201323 CR456502 CU013100 CU013388 DQ890977 DQ894151 AB385232 CR542220	-12389	+	TSC_hg19_v1_chr22_+_38201235 AK091372 AK299209 AK312583 AX746942 BC000145 BC029046	-12557	+	AF073799 NM_003614 AF067733 AY587582	5586	+	CU013021 CU013309 AB462948 CU688190 BC014641 TSC_hg19_v1_chr22_-_38240313 CR456471 BC066909	26468	-	TSC_hg19_v1_chr22_-_38240342 NM_138797	26532	-	NM_001171690|GCAT|23464|glycine C-acetyltransferase##NM_014291|GCAT|23464|glycine C-acetyltransferase##AK290093|GCAT|23464|glycine C-acetyltransferase##AK123190|GCAT|23464|glycine C-acetyltransferase##BC014457|GCAT|23464|glycine C-acetyltransferase##AF077740|GCAT|23464|glycine C-acetyltransferase##CR456502|H1F0|3005|H1 histone family, member 0##CU013100|H1F0|3005|H1 histone family, member 0##CU013388|H1F0|3005|H1 histone family, member 0##DQ890977|H1F0|3005|H1 histone family, member 0##DQ894151|H1F0|3005|H1 histone family, member 0##CR542220|H1F0|3005|H1 histone family, member 0##AK091372|H1F0|3005|H1 histone family, member 0##AK312583|H1F0|3005|H1 histone family, member 0##BC000145|H1F0|3005|H1 histone family, member 0##BC029046|H1F0|3005|H1 histone family, member 0##AF073799|GALR3|8484|galanin receptor 3##NM_003614|GALR3|8484|galanin receptor 3##AF067733|GALR3|8484|galanin receptor 3##AY587582|GALR3|8484|galanin receptor 3##BC014641|ANKRD54|129138|ankyrin repeat domain 54##CR456471|ANKRD54|129138|ankyrin repeat domain 54##BC066909|ANKRD54|129138|ankyrin repeat domain 54##NM_138797|ANKRD54|129138|ankyrin repeat domain 54	0.996629	CTCF.p2:-8:0.997
chr2	30313814	30313925	reg1009397.p1	10.292	+	EU788003 EU788004 EU788005 EU788006 EU788007 EU788008 EU788009 EU788010 FJ838786 FJ838787 U62540 TSC_hg19_v1_chr2_-_30144453 AK296218 NM_004304	-169415	-	TSC_hg19_v1_chr2_+_29338370 BC013862 NM_024692 AL834443	-975514	+	NM_001029883	-1016743	-	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	55901	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	55964	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	56007	+	EU788003|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788004|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788005|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788006|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788007|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788008|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788009|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788010|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838786|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838787|ALK|238|anaplastic lymphoma receptor tyrosine kinase##U62540|ALK|238|anaplastic lymphoma receptor tyrosine kinase##AK296218|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_004304|ALK|238|anaplastic lymphoma receptor tyrosine kinase##BC013862|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_024692|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##AL834443|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)	0.940967	CTCF.p2:13:0.941
chr1	223999463	223999583	reg1010210.p1	10.289	+	TSC_hg19_v1_chr1_+_223900333 CU676918 AB385111 DQ893312 DQ893620 EU176804	-99189	+	TSC_hg19_v1_chr1_+_223900240 AB209855	-99275	+	M23254 TSC_hg19_v1_chr1_+_223900223 AK303952 AF261089 AK315179 BC021303	-99305	+	AB384887 TSC_hg19_v1_chr1_-_224033497 AK294432	33940	-	TSC_hg19_v1_chr1_-_224033620 BC046150 AJ318888 U58334 BC058918	34100	-	NM_001031685 NM_005426 TSC_hg19_v1_chr1_-_224033682	34171	-	DQ893312|CAPN2|824|calpain 2, (m/II) large subunit##DQ893620|CAPN2|824|calpain 2, (m/II) large subunit##EU176804|CAPN2|824|calpain 2, (m/II) large subunit##AB209855|CAPN2|824|calpain 2, (m/II) large subunit##M23254|CAPN2|824|calpain 2, (m/II) large subunit##AK303952|CAPN2|824|calpain 2, (m/II) large subunit##AF261089|CAPN2|824|calpain 2, (m/II) large subunit##AK315179|CAPN2|824|calpain 2, (m/II) large subunit##BC021303|CAPN2|824|calpain 2, (m/II) large subunit##AK294432|TP53BP2|7159|tumor protein p53 binding protein, 2##BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2##AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2##U58334|TP53BP2|7159|tumor protein p53 binding protein, 2##BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2	0.093041	
chr1	61515662	61515782	reg1010361.p1	10.289	+	BC027878 AK124828 NM_152377	-976289	-	BC032594 TSC_hg19_v1_chr1_-_60392478	-1123253	-	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	-1123337	-	AK092769 TSC_hg19_v1_chr1_+_61542908	27134	+	TSC_hg19_v1_chr1_+_61542928 AK299289 NM_001145511	27214	+	TSC_hg19_v1_chr1_+_61547427 AK299579 NM_001145512	31738	+	BC027878|C1orf87|127795|chromosome 1 open reading frame 87##AK124828|C1orf87|127795|chromosome 1 open reading frame 87##NM_152377|C1orf87|127795|chromosome 1 open reading frame 87##BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK299289|NFIA|4774|nuclear factor I/A##NM_001145511|NFIA|4774|nuclear factor I/A##AK299579|NFIA|4774|nuclear factor I/A##NM_001145512|NFIA|4774|nuclear factor I/A	0.987877	CTCF.p2:14:0.988
chr6	40813490	40813597	reg1011342.p1	10.288	+	BC142616 AB033072 NM_020737 AK291474	-258399	-	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-911329	-	AB527188 AJ224328 NM_005943	-918158	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	193406	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	196803	+	AK223461 AK308197 AK310006 AK313288 NM_006789 BC047767 AF161698 BC069688 BC069764 AK300689	207456	+	BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2##AK223461|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK308197|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK310006|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK313288|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##NM_006789|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC047767|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AF161698|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069688|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069764|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK300689|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2	0.80807	CTCF.p2:1:0.808
chr1	19239680	19239788	reg1009171.p1	10.287	+	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-10580	-	AK294552 NM_001161504	-22350	-	NM_152232 AB527225	-53579	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	43065	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	297012	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	338258	-	DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##NM_001136265|IFFO2|126917|intermediate filament family orphan 2##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090	0.943359	CTCF.p2:-24:0.943
chr15	43982313	43982444	reg1011683.p1	10.287	+	BC028728 NM_054020 NM_172095 NM_172097 AK122607 BC064387 BX648099 TSC_hg19_v1_chr15_-_43941088	-41316	-	AK308370 BC129931 NM_153700	-71400	-	NM_020990 AK311698 AK316124	-97106	+	NM_001015001 AK311698 AK316124	2726	+	TSC_hg19_v1_chr15_+_44038635 NM_005313 AK075481 AK293249 BC036000 Z49835 BC071878 BC014433	56187	+	TSC_hg19_v1_chr15_+_44038656 AK075455	56275	+	BC028728|CATSPER2|117155|cation channel, sperm associated 2##NM_054020|CATSPER2|117155|cation channel, sperm associated 2##NM_172095|CATSPER2|117155|cation channel, sperm associated 2##NM_172097|CATSPER2|117155|cation channel, sperm associated 2##AK122607|CATSPER2|117155|cation channel, sperm associated 2##BC064387|CATSPER2|117155|cation channel, sperm associated 2##BX648099|CATSPER2|117155|cation channel, sperm associated 2##AK308370|STRC|161497|stereocilin##BC129931|STRC|161497|stereocilin##NM_153700|STRC|161497|stereocilin##NM_020990|CKMT1B|1159|creatine kinase, mitochondrial 1B##AK316124|CKMT1A|548596|creatine kinase, mitochondrial 1A##NM_001015001|CKMT1A|548596|creatine kinase, mitochondrial 1A##AK316124|CKMT1A|548596|creatine kinase, mitochondrial 1A##NM_005313|PDIA3|2923|protein disulfide isomerase family A, member 3##AK075481|PDIA3|2923|protein disulfide isomerase family A, member 3##AK293249|PDIA3|2923|protein disulfide isomerase family A, member 3##BC036000|PDIA3|2923|protein disulfide isomerase family A, member 3##Z49835|PDIA3|2923|protein disulfide isomerase family A, member 3##BC071878|PDIA3|2923|protein disulfide isomerase family A, member 3##BC014433|PDIA3|2923|protein disulfide isomerase family A, member 3##AK075455|PDIA3|2923|protein disulfide isomerase family A, member 3	0.661142	CTCF.p2:-12:0.661
chr15	93340467	93340631	reg1011253.p1	10.287	+	BC110328 TSC_hg19_v1_chr15_-_93277463	-63160	-	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	-141670	-	AK057393 NM_153040	-325643	+	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	102937	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	103031	+	AK295909 TSC_hg19_v1_chr15_+_93447798	107211	+	BC110328|FAM174B|400451|family with sequence similarity 174, member B##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2##AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2	0.999633	CTCF.p2:15:1.000
chr20	34790895	34791003	reg1010665.p1	10.287	+	TSC_hg19_v1_chr20_+_34742659 NM_012156 AB002336	-48284	+	CR936825 NM_177996	-90647	+	TSC_hg19_v1_chr20_+_34680631 AK096848 AK299817 AK126875 BC040259	-110298	+	TSC_hg19_v1_chr20_+_34824399 AL117419	33440	+	TSC_hg19_v1_chr20_+_34824402 BC001751 BC019311 NM_015511	33474	+	TSC_hg19_v1_chr20_+_34894262 AB023181	103306	+	NM_012156|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AB002336|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##CR936825|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##NM_177996|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK096848|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK299817|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK126875|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##BC040259|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AL117419|C20orf4|25980|chromosome 20 open reading frame 4##BC001751|C20orf4|25980|chromosome 20 open reading frame 4##BC019311|C20orf4|25980|chromosome 20 open reading frame 4##NM_015511|C20orf4|25980|chromosome 20 open reading frame 4##AB023181|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4	0.890921	CTCF.p2:-10:0.891
chr12	122120115	122120219	reg1009493.p1	10.286	+	BC057760 NM_173855	-12608	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	-55524	+	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	-101253	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	30577	+	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	111407	-	TSC_hg19_v1_chr12_-_122240852 AK311480	120690	-	BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B##AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)	0.811493	CTCF.p2:-21:0.811
chr1	241110364	241110474	reg1011431.p1	10.286	+	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	-334965	-	BC046632 TSC_hg19_v1_chr1_-_240775431	-335010	-	TSC_hg19_v1_chr1_+_240255182 NM_020066	-855242	+	AF090116 AK314862 TSC_hg19_v1_chr1_-_241520451	409999	-	TSC_hg19_v1_chr1_-_241520469 BC022009 NM_002924	410053	-	TSC_hg19_v1_chr1_-_241683023 BT009839 AB590519 EU176358 BC017444 BC003108 U48857 U59309	572613	-	AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2##BC046632|GREM2|64388|gremlin 2##NM_020066|FMN2|56776|formin 2##AF090116|RGS7|6000|regulator of G-protein signaling 7##AK314862|RGS7|6000|regulator of G-protein signaling 7##BC022009|RGS7|6000|regulator of G-protein signaling 7##NM_002924|RGS7|6000|regulator of G-protein signaling 7##BT009839|FH|2271|fumarate hydratase##EU176358|FH|2271|fumarate hydratase##BC017444|FH|2271|fumarate hydratase##BC003108|FH|2271|fumarate hydratase##U48857|FH|2271|fumarate hydratase##U59309|FH|2271|fumarate hydratase	0.486525	CTCF.p2:2:0.487
chr15	44558080	44558224	reg1014863.p1	10.286	+	AK090572 AX746516 TSC_hg19_v1_chr15_-_44487470	-70683	-	BC043486 CU691018 BC007796 BC053647 NM_032892 TSC_hg19_v1_chr15_-_44487448	-70802	-	NM_001167941 NM_024908 TSC_hg19_v1_chr15_+_44119199 AK290933 BC025247 AK023035 BC051855 EF011624 CU690868	-438965	+	TSC_hg19_v1_chr15_+_44580919 NM_138423 NM_177974 BC012124	22747	+	AK098265 TSC_hg19_v1_chr15_+_44580937	22789	+	BC063480 AY358086 TSC_hg19_v1_chr15_+_44580965	22807	+	AK090572|FRMD5|84978|FERM domain containing 5##BC043486|FRMD5|84978|FERM domain containing 5##BC007796|FRMD5|84978|FERM domain containing 5##BC053647|FRMD5|84978|FERM domain containing 5##NM_032892|FRMD5|84978|FERM domain containing 5##NM_001167941|WDR76|79968|WD repeat domain 76##NM_024908|WDR76|79968|WD repeat domain 76##AK290933|WDR76|79968|WD repeat domain 76##BC025247|WDR76|79968|WD repeat domain 76##AK023035|WDR76|79968|WD repeat domain 76##BC051855|WDR76|79968|WD repeat domain 76##EF011624|WDR76|79968|WD repeat domain 76##NM_138423|CASC4|113201|cancer susceptibility candidate 4##NM_177974|CASC4|113201|cancer susceptibility candidate 4##BC012124|CASC4|113201|cancer susceptibility candidate 4##AK098265|CASC4|113201|cancer susceptibility candidate 4##BC063480|CASC4|113201|cancer susceptibility candidate 4##AY358086|CASC4|113201|cancer susceptibility candidate 4	0.668344	CTCF.p2:-13:0.668
chr22	43532388	43532515	reg1012807.p1	10.286	+	NM_001197 TSC_hg19_v1_chr22_+_43506755 BC001599 U49730 U34584	-25679	+	TSC_hg19_v1_chr22_-_43485410 AF104927 AF173935 AK315658 BC009058 AK095996 BC014968 AL136687 NM_012263	-47064	-	TSC_hg19_v1_chr22_-_43411156 NM_001184970	-121274	-	TSC_hg19_v1_chr22_-_43539355 BC030985 AL359401 AL359403 AK314059	6901	-	TSC_hg19_v1_chr22_-_43539392 BC042195	6941	-	NM_014507 NM_173467 TSC_hg19_v1_chr22_-_43539405	6952	-	NM_001197|BIK|638|BCL2-interacting killer (apoptosis-inducing)##BC001599|BIK|638|BCL2-interacting killer (apoptosis-inducing)##U49730|BIK|638|BCL2-interacting killer (apoptosis-inducing)##U34584|BIK|638|BCL2-interacting killer (apoptosis-inducing)##AF104927|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AF173935|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK315658|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC009058|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK095996|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC014968|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AL136687|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_012263|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_001184970|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##BC030985|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AL359401|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AL359403|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AK314059|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##BC042195|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##NM_014507|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##NM_173467|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)	0.999856	CTCF.p2:6:1.000
chr3	101522156	101522280	reg1010964.p1	10.286	+	AK289689 NM_001134456	-23933	+	TSC_hg19_v1_chr3_+_101498080 BC009431	-24130	+	NM_145037 TSC_hg19_v1_chr3_+_101498054	-24170	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	24742	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	46156	+	AY090780 NM_175056 BC143817	631649	+	AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##BC009431|FAM55C|91775|family with sequence similarity 55, member C##NM_145037|FAM55C|91775|family with sequence similarity 55, member C##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1	0.952542	CTCF.p2:-7:0.953
chr2	27069296	27069417	reg1011172.p1	10.285	+	TSC_hg19_v1_chr2_+_27008924 U14518 BC000881 BC002703 CU674442 BT007246	-60368	+	NM_001809 NM_001042426 TSC_hg19_v1_chr2_+_27008894	-60464	+	TSC_hg19_v1_chr2_+_26987155 AK000562 NM_017877 BC028081 BC035519 BX647807 AK075164 AK296996 BC011013 AK299598 AY358820 AK222929 BX648017 CU688388 CR457243	-82187	+	AF264015 NM_020134 TSC_hg19_v1_chr2_+_27070999 BC002874 NM_001253723 NM_001253724	1770	+	TSC_hg19_v1_chr2_+_27193529 AK312342 AB025186 NM_012326 BC011557 Y11174	124194	+	TSC_hg19_v1_chr2_+_27255814 NM_001083590 NM_017727 BC068479	186427	+	U14518|CENPA|1058|centromere protein A##BC000881|CENPA|1058|centromere protein A##BC002703|CENPA|1058|centromere protein A##BT007246|CENPA|1058|centromere protein A##NM_001809|CENPA|1058|centromere protein A##NM_001042426|CENPA|1058|centromere protein A##AK000562|C2orf18|54978|chromosome 2 open reading frame 18##NM_017877|C2orf18|54978|chromosome 2 open reading frame 18##BC028081|C2orf18|54978|chromosome 2 open reading frame 18##BC035519|C2orf18|54978|chromosome 2 open reading frame 18##BX647807|C2orf18|54978|chromosome 2 open reading frame 18##AK075164|C2orf18|54978|chromosome 2 open reading frame 18##AK296996|C2orf18|54978|chromosome 2 open reading frame 18##BC011013|CENPA|1058|centromere protein A##AK299598|C2orf18|54978|chromosome 2 open reading frame 18##AY358820|C2orf18|54978|chromosome 2 open reading frame 18##AK222929|C2orf18|54978|chromosome 2 open reading frame 18##BX648017|C2orf18|54978|chromosome 2 open reading frame 18##CR457243|C2orf18|54978|chromosome 2 open reading frame 18##AF264015|DPYSL5|56896|dihydropyrimidinase-like 5##NM_020134|DPYSL5|56896|dihydropyrimidinase-like 5##BC002874|DPYSL5|56896|dihydropyrimidinase-like 5##NM_001253723|DPYSL5|56896|dihydropyrimidinase-like 5##NM_001253724|DPYSL5|56896|dihydropyrimidinase-like 5##AK312342|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##AB025186|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##NM_012326|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##BC011557|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##Y11174|MAPRE3|22924|microtubule-associated protein, RP/EB family, member 3##NM_001083590|TMEM214|54867|transmembrane protein 214##NM_017727|TMEM214|54867|transmembrane protein 214##BC068479|TMEM214|54867|transmembrane protein 214	0.464289	CTCF.p2:-17:0.464
chr9	140197031	140197175	reg1009227.p2	10.284	+	BC053618 NM_001004354 TSC_hg19_v1_chr9_-_140196724	-383	-	TSC_hg19_v1_chr9_+_140172277 AK000252 NM_017723	-24818	+	TSC_hg19_v1_chr9_+_140149888 AF464935 AB384577 AM393289	-47180	+	BC065002 TSC_hg19_v1_chr9_-_140317615 BC110879 AK000440 AK094438 BC039252 BC037355	120507	-	TSC_hg19_v1_chr9_-_140317652 BC033079 BC069205	120573	-	NM_017820 TSC_hg19_v1_chr9_-_140317724	120615	-	BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein##NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein##AK000252|C9orf167|54863|chromosome 9 open reading frame 167##NM_017723|C9orf167|54863|chromosome 9 open reading frame 167##AF464935|COBRA1|25920|cofactor of BRCA1##AM393289|COBRA1|25920|cofactor of BRCA1##BC065002|EXD3|54932|exonuclease 3'-5' domain containing 3##BC110879|EXD3|54932|exonuclease 3'-5' domain containing 3##AK000440|EXD3|54932|exonuclease 3'-5' domain containing 3##AK094438|EXD3|54932|exonuclease 3'-5' domain containing 3##BC039252|EXD3|54932|exonuclease 3'-5' domain containing 3##BC037355|EXD3|54932|exonuclease 3'-5' domain containing 3##BC033079|EXD3|54932|exonuclease 3'-5' domain containing 3##BC069205|EXD3|54932|exonuclease 3'-5' domain containing 3##NM_017820|EXD3|54932|exonuclease 3'-5' domain containing 3	0.644384	CTCF.p2:11:0.632
chr6	37349384	37349540	reg1012691.p1	10.283	+	TSC_hg19_v1_chr6_+_37321829 AB014546 AK222765 AK298319 AK022075 AK308840 AF334675 BT007446 CU675685 DQ890737 DQ893909	-27581	+	TSC_hg19_v1_chr6_+_37321801 BC007517	-27654	+	TSC_hg19_v1_chr6_+_37321758 NM_003958 NM_183078	-27704	+	TSC_hg19_v1_chr6_+_37400996 NM_015050 BC031890 D43949	51484	+	TSC_hg19_v1_chr6_+_37401050 AK292564	51593	+	AB385274 TSC_hg19_v1_chr6_+_37403469	53975	+	AB014546|RNF8|9025|ring finger protein 8##AK222765|RNF8|9025|ring finger protein 8##AK298319|RNF8|9025|ring finger protein 8##AK022075|RNF8|9025|ring finger protein 8##AK308840|RNF8|9025|ring finger protein 8##AF334675|RNF8|9025|ring finger protein 8##BT007446|RNF8|9025|ring finger protein 8##DQ890737|RNF8|9025|ring finger protein 8##DQ893909|RNF8|9025|ring finger protein 8##BC007517|RNF8|9025|ring finger protein 8##NM_003958|RNF8|9025|ring finger protein 8##NM_183078|RNF8|9025|ring finger protein 8##NM_015050|FTSJD2|23070|FtsJ methyltransferase domain containing 2##BC031890|FTSJD2|23070|FtsJ methyltransferase domain containing 2##D43949|FTSJD2|23070|FtsJ methyltransferase domain containing 2##AK292564|FTSJD2|23070|FtsJ methyltransferase domain containing 2	0.697206	CTCF.p2:-17:0.697
chr10	4857998	4858178	reg1006488.p2	10.282	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-1030579	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-1030777	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-1643083	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	10330	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	147426	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	147535	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	1.999622	CTCF.p2:-9:1.000	CTCF.p2:100:1.000
chr17	49613319	49613437	reg1010558.p1	10.282	+	AF151806 TSC_hg19_v1_chr17_+_49337913 AK314399 BC025276 BC001535	-275453	+	TSC_hg19_v1_chr17_+_49337906 NM_016001	-275479	+	TSC_hg19_v1_chr17_+_49337888 AK026355	-275492	+	TSC_hg19_v1_chr17_-_50235676 AK294652 AK313001	622310	-	TSC_hg19_v1_chr17_-_50236075 BC047456 BC068462	622662	-	CR936674 TSC_hg19_v1_chr17_-_50236127 NM_020178	622760	-	AF151806|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK314399|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC025276|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC001535|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##NM_016001|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK026355|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK294652|CA10|56934|carbonic anhydrase X##AK313001|CA10|56934|carbonic anhydrase X##BC047456|CA10|56934|carbonic anhydrase X##BC068462|CA10|56934|carbonic anhydrase X##NM_020178|CA10|56934|carbonic anhydrase X	0.99804	CTCF.p2:13:0.998
chr6	150155780	150155896	reg1010351.p1	10.282	+	TSC_hg19_v1_chr6_+_150070878 AK289724 BC007501 D13892 AK304532 AK129778 BC008748 D25545 D25546 D25547 M93008 CU675673	-84892	+	TSC_hg19_v1_chr6_+_150070845 AK098739	-84991	+	TSC_hg19_v1_chr6_+_150070835 NM_001252049 NM_001252050 NM_001252051 NM_001252052 NM_001252053 NM_005389	-85011	+	AK027641 AK223134 TSC_hg19_v1_chr6_-_150185169	29352	-	TSC_hg19_v1_chr6_-_150185496 BC025239 BC043141 NM_032832	29605	-	AY054974 AY176317 AY252119 EF489426 AF359243 BC101976 BC103694 AY069961 NM_001243325 NM_001243327 NM_139165	56264	-	AK289724|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##BC007501|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D13892|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK304532|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK129778|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##BC008748|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D25545|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D25546|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D25547|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##M93008|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK098739|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252049|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252050|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252051|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252052|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252053|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_005389|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK027641|LRP11|84918|low density lipoprotein receptor-related protein 11##AK223134|LRP11|84918|low density lipoprotein receptor-related protein 11##BC025239|LRP11|84918|low density lipoprotein receptor-related protein 11##BC043141|LRP11|84918|low density lipoprotein receptor-related protein 11##NM_032832|LRP11|84918|low density lipoprotein receptor-related protein 11##AY054974|RAET1E|135250|retinoic acid early transcript 1E##AY176317|RAET1E|135250|retinoic acid early transcript 1E##AY252119|RAET1E|135250|retinoic acid early transcript 1E##EF489426|RAET1E|135250|retinoic acid early transcript 1E##AF359243|RAET1E|135250|retinoic acid early transcript 1E##BC101976|RAET1E|135250|retinoic acid early transcript 1E##BC103694|RAET1E|135250|retinoic acid early transcript 1E##AY069961|RAET1E|135250|retinoic acid early transcript 1E##NM_001243325|RAET1E|135250|retinoic acid early transcript 1E##NM_001243327|RAET1E|135250|retinoic acid early transcript 1E##NM_139165|RAET1E|135250|retinoic acid early transcript 1E	0.99967	CTCF.p2:6:1.000
chr2	48827486	48827616	reg1012829.p1	10.281	+	NM_001198594 BC101772 BC101774 BC143520 AF255310 BC121063 BC121064 AY026319	-19803	+	AF026169 NM_172311	-31393	+	TSC_hg19_v1_chr2_+_48757357 AK314464 NM_001198595 NM_006873 CR936807	-70226	+	AK302220 NM_001193487 NM_006872 BC025991 AK223350 AF106857 CU693090 DQ891566 DQ894756 BC064585	17424	+	S57793 M63108 M73746 AK123498 NM_000233	155293	-	AY429104 BC096831 X68044 JN003607 BC118548 BC125270 M65085 S59900 M95489 AK292562 AK310367 NM_000145 NM_181446	554059	-	NM_001198594|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##BC101772|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##BC101774|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##BC143520|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##AF255310|STON1|11037|stonin 1##BC121063|STON1|11037|stonin 1##BC121064|STON1|11037|stonin 1##AY026319|STON1|11037|stonin 1##AF026169|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##NM_172311|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##AK314464|STON1|11037|stonin 1##NM_001198595|STON1|11037|stonin 1##NM_006873|STON1|11037|stonin 1##CR936807|STON1|11037|stonin 1##AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like##BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like##AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like##AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like##BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like##S57793|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M63108|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M73746|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK123498|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##NM_000233|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AY429104|FSHR|2492|follicle stimulating hormone receptor##BC096831|FSHR|2492|follicle stimulating hormone receptor##X68044|FSHR|2492|follicle stimulating hormone receptor##JN003607|FSHR|2492|follicle stimulating hormone receptor##BC118548|FSHR|2492|follicle stimulating hormone receptor##BC125270|FSHR|2492|follicle stimulating hormone receptor##M65085|FSHR|2492|follicle stimulating hormone receptor##S59900|FSHR|2492|follicle stimulating hormone receptor##M95489|FSHR|2492|follicle stimulating hormone receptor##AK292562|FSHR|2492|follicle stimulating hormone receptor##AK310367|FSHR|2492|follicle stimulating hormone receptor##NM_000145|FSHR|2492|follicle stimulating hormone receptor##NM_181446|FSHR|2492|follicle stimulating hormone receptor	0.582326	CTCF.p2:0:0.582
chr1	242059798	242059938	reg1013078.p1	10.280	+	NM_003686 NM_006027 AF042282 AF091740 AF060479 AF084974	-47783	+	BC007491 TSC_hg19_v1_chr1_+_242011556	-48318	+	TSC_hg19_v1_chr1_+_242011520 NM_130398 AK291291	-48364	+	BC132986 BC132988 AF276659 BC127722 NM_001004343	102506	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	552902	-	AK098092 NM_152666	628129	-	NM_003686|EXO1|9156|exonuclease 1##NM_006027|EXO1|9156|exonuclease 1##AF042282|EXO1|9156|exonuclease 1##AF091740|EXO1|9156|exonuclease 1##AF060479|EXO1|9156|exonuclease 1##AF084974|EXO1|9156|exonuclease 1##BC007491|EXO1|9156|exonuclease 1##NM_130398|EXO1|9156|exonuclease 1##AK291291|EXO1|9156|exonuclease 1##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5	0.866333	CTCF.p2:-17:0.866
chr3	125691367	125691483	reg1012217.p1	10.280	+	AF231410 NM_001012337 BC141849 AK302014	-3371	+	BC073816 NM_001015050 NM_001195223	-35542	-	TSC_hg19_v1_chr3_+_125635451 BC032772 BC041080	-55969	+	AK093380 AX748089 NM_001008487	84188	-	BC028241 BC009444 TSC_hg19_v1_chr3_-_125802968 AK022780 AK000480 AK091671 AX747121 AK021925 BC009039 AK307107 NM_001008485 NM_001008486 NM_017836	111616	-	NM_001164475 AK298070	128969	-	AF231410|ROPN1B|152015|rhophilin associated tail protein 1B##NM_001012337|ROPN1B|152015|rhophilin associated tail protein 1B##BC141849|ROPN1B|152015|rhophilin associated tail protein 1B##BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like##BC032772|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC041080|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##AK093380|SLC41A3|54946|solute carrier family 41, member 3##NM_001008487|SLC41A3|54946|solute carrier family 41, member 3##BC028241|SLC41A3|54946|solute carrier family 41, member 3##BC009444|SLC41A3|54946|solute carrier family 41, member 3##AK022780|SLC41A3|54946|solute carrier family 41, member 3##AK000480|SLC41A3|54946|solute carrier family 41, member 3##AK091671|SLC41A3|54946|solute carrier family 41, member 3##AK021925|SLC41A3|54946|solute carrier family 41, member 3##BC009039|SLC41A3|54946|solute carrier family 41, member 3##AK307107|SLC41A3|54946|solute carrier family 41, member 3##NM_001008485|SLC41A3|54946|solute carrier family 41, member 3##NM_001008486|SLC41A3|54946|solute carrier family 41, member 3##NM_017836|SLC41A3|54946|solute carrier family 41, member 3##NM_001164475|SLC41A3|54946|solute carrier family 41, member 3##AK298070|SLC41A3|54946|solute carrier family 41, member 3	0.999476	CTCF.p2:-9:0.999
chr4	69041404	69041515	reg1010057.p2	10.280	+	AK122625 NM_207407	-45873	-	AY498712 BC111796 AK292950 AF071882 AK131518 NM_001114387 NM_182606	-212272	-	AK296853 BC125195 BC125196 AB002134 NM_004262 AK290289	-291752	-	AK123556 NM_001129907	42338	-	BC126195 AK310210 AL833167 BX537945 AK290904 NM_182502	69913	-	TSC_hg19_v1_chr4_-_69215804 BC041119 AK056430 NM_001031732 NM_133370	174303	-	AK122625|TMPRSS11F|389208|transmembrane protease, serine 11F##NM_207407|TMPRSS11F|389208|transmembrane protease, serine 11F##AY498712|TMPRSS11A|339967|transmembrane protease, serine 11A##BC111796|TMPRSS11A|339967|transmembrane protease, serine 11A##AK292950|TMPRSS11A|339967|transmembrane protease, serine 11A##AF071882|TMPRSS11A|339967|transmembrane protease, serine 11A##AK131518|TMPRSS11A|339967|transmembrane protease, serine 11A##NM_001114387|TMPRSS11A|339967|transmembrane protease, serine 11A##NM_182606|TMPRSS11A|339967|transmembrane protease, serine 11A##AK296853|TMPRSS11D|9407|transmembrane protease, serine 11D##BC125195|TMPRSS11D|9407|transmembrane protease, serine 11D##BC125196|TMPRSS11D|9407|transmembrane protease, serine 11D##AB002134|TMPRSS11D|9407|transmembrane protease, serine 11D##NM_004262|TMPRSS11D|9407|transmembrane protease, serine 11D##AK290289|TMPRSS11D|9407|transmembrane protease, serine 11D##AK123556|TMPRSS11BNL|401136|TMPRSS11B N terminal-like##NM_001129907|TMPRSS11BNL|401136|TMPRSS11B N terminal-like##BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B##AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B##AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B##BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B##AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B##NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B##BC041119|YTHDC1|91746|YTH domain containing 1##AK056430|YTHDC1|91746|YTH domain containing 1##NM_001031732|YTHDC1|91746|YTH domain containing 1##NM_133370|YTHDC1|91746|YTH domain containing 1	0.999558	CTCF.p2:4:1.000
chrX	39101574	39101693	reg1010482.p2	10.280	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-438093	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-438173	+	BC008908 NM_021242	-438561	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	855059	-	BC114220 NM_001123383 NM_001123384	934948	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	1338553	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.178394	
chr11	58820910	58821028	reg1012598.p1	10.278	+	AK091965 AX747281 DQ084381 NM_001220496 NM_080661 AK055818	-110217	+	NM_001220494 AK300479 BC008353	-125832	+	BC021682 NM_145016 BC016789	-208981	-	TSC_hg19_v1_chr11_+_58874641 BC062456 NM_001142703 NM_001142704 NM_198947 BC005998 AK304258 AY457926 AK303520	53693	+	TSC_hg19_v1_chr11_-_58910222 AK124475 BC028022	89274	-	TSC_hg19_v1_chr11_+_58910331 AK092237 AX747422 NM_001142519 NM_001142520 NM_001142521	89341	+	AK091965|GLYATL1|92292|glycine-N-acyltransferase-like 1##DQ084381|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220496|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_080661|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK055818|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC062456|FAM111B|374393|family with sequence similarity 111, member B##NM_001142703|FAM111B|374393|family with sequence similarity 111, member B##NM_001142704|FAM111B|374393|family with sequence similarity 111, member B##NM_198947|FAM111B|374393|family with sequence similarity 111, member B##BC005998|FAM111B|374393|family with sequence similarity 111, member B##AK304258|FAM111B|374393|family with sequence similarity 111, member B##AY457926|FAM111B|374393|family with sequence similarity 111, member B##AK303520|FAM111B|374393|family with sequence similarity 111, member B##AK092237|FAM111A|63901|family with sequence similarity 111, member A##NM_001142519|FAM111A|63901|family with sequence similarity 111, member A##NM_001142520|FAM111A|63901|family with sequence similarity 111, member A##NM_001142521|FAM111A|63901|family with sequence similarity 111, member A	0.997043	CTCF.p2:7:0.997
chr1	23730555	23730667	reg1011338.p1	10.277	+	TSC_hg19_v1_chr1_-_23696358 NM_001077195	-34299	-	TSC_hg19_v1_chr1_+_23695456 BC054115 BC068594 AK074989	-35116	+	CU691148 EU446536 TSC_hg19_v1_chr1_-_23694804 AK308173 BC056400 AK092364 AX747503 AL834485 NM_030634	-35913	-	AB587445 EU446905 TSC_hg19_v1_chr1_-_23751239 BC041613 AY540752 AK027024 NM_003196 AK290272 AK300707 AK310039	20597	-	CU687420 TSC_hg19_v1_chr1_-_23810673 AB056749 AK092291 AK295100 AX747456 AK299359 BC060786	80055	-	TSC_hg19_v1_chr1_-_23810732 NM_001143778 NM_017707	80126	-	NM_001077195|ZNF436|80818|zinc finger protein 436##BC054115|C1orf213|148898|chromosome 1 open reading frame 213##BC068594|C1orf213|148898|chromosome 1 open reading frame 213##AK074989|C1orf213|148898|chromosome 1 open reading frame 213##EU446536|ZNF436|80818|zinc finger protein 436##AK308173|ZNF436|80818|zinc finger protein 436##BC056400|ZNF436|80818|zinc finger protein 436##AK092364|ZNF436|80818|zinc finger protein 436##AL834485|ZNF436|80818|zinc finger protein 436##NM_030634|ZNF436|80818|zinc finger protein 436##EU446905|TCEA3|6920|transcription elongation factor A (SII), 3##BC041613|TCEA3|6920|transcription elongation factor A (SII), 3##AY540752|TCEA3|6920|transcription elongation factor A (SII), 3##AK027024|TCEA3|6920|transcription elongation factor A (SII), 3##NM_003196|TCEA3|6920|transcription elongation factor A (SII), 3##AK290272|TCEA3|6920|transcription elongation factor A (SII), 3##AK300707|TCEA3|6920|transcription elongation factor A (SII), 3##AK310039|TCEA3|6920|transcription elongation factor A (SII), 3##AB056749|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##AK092291|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##AK295100|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##AK299359|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##BC060786|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##NM_001143778|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3##NM_017707|ASAP3|55616|ArfGAP with SH3 domain, ankyrin repeat and PH domain 3	0.670704	CTCF.p2:6:0.581
chr5	34474746	34474853	reg1010420.p1	10.277	+	EU399231 EU399232 BC112925 AF329837 BC120990 AF326976 AY358388 AK075533 BX640995 AK315921 AK295968 NM_030945 NM_181435	-431497	-	TSC_hg19_v1_chr5_-_34008240 AK225749	-466555	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	-466636	-	TSC_hg19_v1_chr5_+_34656432 NM_001145522 NM_015577	181614	+	TSC_hg19_v1_chr5_+_34656506 BC052988 AF155135 AK314379	181713	+	AB037755 NM_001145520 TSC_hg19_v1_chr5_+_34656599	181798	+	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK225749|AMACR|23600|alpha-methylacyl-CoA racemase##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001145522|RAI14|26064|retinoic acid induced 14##NM_015577|RAI14|26064|retinoic acid induced 14##BC052988|RAI14|26064|retinoic acid induced 14##AF155135|RAI14|26064|retinoic acid induced 14##AK314379|RAI14|26064|retinoic acid induced 14##AB037755|RAI14|26064|retinoic acid induced 14##NM_001145520|RAI14|26064|retinoic acid induced 14	0.954395	CTCF.p2:-7:0.954
chr17	55910844	55910947	reg1008962.p2	10.276	+	AK093888 AX748353 NM_170721	-576522	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-576922	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-747752	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	16509	-	AK000746 NM_017949	69854	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	121781	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.995896	CTCF.p2:-10:0.996
chr18	59916853	59916974	reg1010719.p2	10.276	+	TSC_hg19_v1_chr18_+_59855176 AB384606	-61703	+	TSC_hg19_v1_chr18_+_59854540 BX648481	-62325	+	TSC_hg19_v1_chr18_+_59854521 AK091160 AX746817 NM_020854	-62388	+	AB209762 AF018253 NM_003839 AB527346	75637	+	NM_017742 TSC_hg19_v1_chr18_+_60190696 BC006340	273841	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	465751	+	BX648481|KIAA1468|57614|KIAA1468##AK091160|KIAA1468|57614|KIAA1468##NM_020854|KIAA1468|57614|KIAA1468##AB209762|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##AF018253|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_003839|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_017742|ZCCHC2|54877|zinc finger, CCHC domain containing 2##BC006340|ZCCHC2|54877|zinc finger, CCHC domain containing 2##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1	0.999244	CTCF.p2:-3:0.999
chr15	31186808	31186928	reg1006554.p1	10.275	+	BC105788 NM_001039841	-267990	+	TSC_hg19_v1_chr15_+_30918372 BC071990	-268482	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-501156	-	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	9206	+	CR936734 CR936727 TSC_hg19_v1_chr15_+_31196114 AB023235	9249	+	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	96899	-	BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936734|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936727|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AB023235|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10	0.885489	CTCF.p2:-2:0.885
chr2	73162227	73162343	reg1011348.p1	10.275	+	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	-17632	+	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	-47755	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	-109181	-	TSC_hg19_v1_chr2_-_73298414 AK024193	136151	-	TSC_hg19_v1_chr2_-_73298842 AL833454 AK314770 AK289731 AY044437 BC101311 BC101312 BC101313 NM_144579	136604	-	AK023823 TSC_hg19_v1_chr2_-_73316784	154498	-	BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1##NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##AK024193|SFXN5|94097|sideroflexin 5##AL833454|SFXN5|94097|sideroflexin 5##AK314770|SFXN5|94097|sideroflexin 5##AK289731|SFXN5|94097|sideroflexin 5##AY044437|SFXN5|94097|sideroflexin 5##BC101311|SFXN5|94097|sideroflexin 5##BC101312|SFXN5|94097|sideroflexin 5##BC101313|SFXN5|94097|sideroflexin 5##NM_144579|SFXN5|94097|sideroflexin 5##AK023823|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)	0.995213	CTCF.p2:0:0.995
chr17	66459215	66459366	reg1012688.p1	10.274	+	AY691424 CU691786 TSC_hg19_v1_chr17_-_66453638 BC039867 AK301830 AK000917 NM_017983	-5679	-	AX750577 AX750581 U79745 AK313121 AK290417 BC064832 NM_001174166 NM_004694	-171960	-	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	-203956	+	TSC_hg19_v1_chr17_+_66508140 NM_212471 Y07642	48833	+	TSC_hg19_v1_chr17_+_66508161 BC093042	48876	+	TSC_hg19_v1_chr17_+_66508546 NM_002734 NM_212472	49245	+	AY691424|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##BC039867|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK301830|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK000917|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_017983|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AX750581|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G##NM_212471|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##Y07642|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC093042|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##NM_002734|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##NM_212472|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	0.998088	CTCF.p2:18:0.998
chr2	90535072	90535175	reg1011898.p1	10.274	+	TSC_hg19_v1_chr2_+_90211706 Z69013	-323405	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-457369	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-915270	-	TSC_hg19_v1_chr2_-_91847997 BC030764	1312880	-	AK097438 BC021716 NM_144705 AK296678 CU692394	5002127	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	5156359	+	BC070334|IGKC|3514|immunoglobulin kappa constant##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein	0.933043	CTCF.p2:-5:0.933
chr1	146011803	146011936	reg1011495.p1	10.273	+	NM_001097616	-128002	+	BT006679 DQ890650 DQ893830 AB528816 TSC_hg19_v1_chr1_-_145827047 BC003187 AK316371 BC146880 AF132947 U78723 BC067816 AB097024 AB097025 AK223223 AK299995 AK302266 AY358966 AK021758 AK297145 NM_001097612 NM_001097613	-184853	-	TSC_hg19_v1_chr1_+_145727712 AK313100 AK298269 BC006496 BC006518 AF012281	-284150	+	AF419617 NM_001101663	56375	-	BC136292 NM_183372 AL832622	70829	-	AJ224538 HQ257946 TSC_hg19_v1_chr1_-_146643798	631896	-	NM_001097616|GPR89C|728932|G protein-coupled receptor 89C##BT006679|GPR89A|653519|G protein-coupled receptor 89A##DQ890650|GPR89B|51463|G protein-coupled receptor 89B##DQ893830|GPR89A|653519|G protein-coupled receptor 89A##BC003187|GPR89A|653519|G protein-coupled receptor 89A##AK316371|GPR89A|653519|G protein-coupled receptor 89A##BC146880|GPR89A|653519|G protein-coupled receptor 89A##AF132947|GPR89A|653519|G protein-coupled receptor 89A##U78723|GPR89B|51463|G protein-coupled receptor 89B##BC067816|GPR89A|653519|G protein-coupled receptor 89A##AB097024|GPR89A|653519|G protein-coupled receptor 89A##AB097025|GPR89A|653519|G protein-coupled receptor 89A##AK223223|GPR89A|653519|G protein-coupled receptor 89A##AK299995|GPR89A|653519|G protein-coupled receptor 89A##AK302266|GPR89B|51463|G protein-coupled receptor 89B##AY358966|GPR89A|653519|G protein-coupled receptor 89A##AK021758|GPR89A|653519|G protein-coupled receptor 89A##AK297145|GPR89A|653519|G protein-coupled receptor 89A##NM_001097612|GPR89A|653519|G protein-coupled receptor 89A##NM_001097613|GPR89A|653519|G protein-coupled receptor 89A##AK313100|PDZK1|5174|PDZ domain containing 1##AK298269|PDZK1|5174|PDZ domain containing 1##BC006496|PDZK1|5174|PDZ domain containing 1##BC006518|PDZK1|5174|PDZ domain containing 1##AF012281|PDZK1|5174|PDZ domain containing 1##AF419617|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_001101663|NBPF24|728912|neuroblastoma breakpoint family, member 24##BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##AJ224538|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##HQ257946|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	0.894729	CTCF.p2:17:0.895
chr12	101062837	101062979	reg1011084.p1	10.273	+	TSC_hg19_v1_chr12_+_100967484 BC043366 NM_174942	-95419	+	TSC_hg19_v1_chr12_+_100967438 AK315189	-95477	+	AF478445 AF478446 NM_001206992 NM_001206993 AK296612 BX571749 AB463943 BC071778 AK296647	-165739	+	NM_178826 TSC_hg19_v1_chr12_+_101188522 AK091591 AX747079 AK316105 AK293810	125646	+	AK313788 AF536216 AY081220 NM_145913	541091	-	TSC_hg19_v1_chr12_+_101673904 NM_014503 AK307934 AJ006778	610997	+	BC043366|GAS2L3|283431|growth arrest-specific 2 like 3##NM_174942|GAS2L3|283431|growth arrest-specific 2 like 3##AK315189|GAS2L3|283431|growth arrest-specific 2 like 3##AF478445|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AF478446|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206992|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206993|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AK296612|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BX571749|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC071778|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AK296647|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_178826|ANO4|121601|anoctamin 4##AK091591|ANO4|121601|anoctamin 4##AK316105|ANO4|121601|anoctamin 4##AK293810|ANO4|121601|anoctamin 4##AK313788|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AF536216|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AY081220|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_145913|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_014503|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK307934|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AJ006778|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)	1.150341	CTCF.p2:-13:1.000
chr12	80866826	80866949	reg1010521.p1	10.273	+	NM_001145026	-28762	+	NM_173591	-263655	+	AF458589 BC092481 NM_001143885 NM_001244990	-537653	-	NM_002469 AK313287 X52011 BC017834 AB587443 CU676084 DQ893248 DQ896577 CR407641 CR541763	234565	+	TSC_hg19_v1_chr12_+_81110690 NM_005593 BC069373 X14894 AB528948 BT019399	243878	+	TSC_hg19_v1_chr12_-_81331470 AK309256	464580	-	NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q##NM_173591|OTOGL|283310|otogelin-like##AF458589|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC092481|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143885|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001244990|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_002469|MYF6|4618|myogenic factor 6 (herculin)##AK313287|MYF6|4618|myogenic factor 6 (herculin)##X52011|MYF6|4618|myogenic factor 6 (herculin)##BC017834|MYF6|4618|myogenic factor 6 (herculin)##DQ893248|MYF6|4618|myogenic factor 6 (herculin)##DQ896577|MYF6|4618|myogenic factor 6 (herculin)##CR407641|MYF6|4618|myogenic factor 6 (herculin)##CR541763|MYF6|4618|myogenic factor 6 (herculin)##NM_005593|MYF5|4617|myogenic factor 5##BC069373|MYF5|4617|myogenic factor 5##X14894|MYF5|4617|myogenic factor 5##BT019399|MYF5|4617|myogenic factor 5##AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)	0.978536	CTCF.p2:4:0.979
chr17	33498572	33498719	reg1008940.p1	10.273	+	AK095929 BX647642 NM_001033576 NM_173167 AL832355 AL833281	-23798	+	AB209111 BC002884 TSC_hg19_v1_chr17_-_33469323 BC012075 AK303253 AK001320 AK304508 NM_001014445 NM_018096	-29325	-	AK313775 NM_017559 BC024002 AK225743 AL133054 EU831600 EU831687	-49991	+	AK097473 BC136422 BC140700 NM_152462	22748	-	TSC_hg19_v1_chr17_+_33570090 NM_144975 AK303632 BX647942 AK054668 AK303299 BC021238	71448	+	AL831964 BC052586 AK092241 AX747425 TSC_hg19_v1_chr17_-_33700641 NM_001104587 NM_001104588 NM_001104589 NM_001104590 NM_152270	202024	-	AK095929|UNC45B|146862|unc-45 homolog B (C. elegans)##BX647642|UNC45B|146862|unc-45 homolog B (C. elegans)##NM_001033576|UNC45B|146862|unc-45 homolog B (C. elegans)##NM_173167|UNC45B|146862|unc-45 homolog B (C. elegans)##AL832355|UNC45B|146862|unc-45 homolog B (C. elegans)##AL833281|UNC45B|146862|unc-45 homolog B (C. elegans)##AB209111|NLE1|54475|notchless homolog 1 (Drosophila)##BC002884|NLE1|54475|notchless homolog 1 (Drosophila)##BC012075|NLE1|54475|notchless homolog 1 (Drosophila)##AK303253|NLE1|54475|notchless homolog 1 (Drosophila)##AK001320|NLE1|54475|notchless homolog 1 (Drosophila)##AK304508|NLE1|54475|notchless homolog 1 (Drosophila)##NM_001014445|NLE1|54475|notchless homolog 1 (Drosophila)##NM_018096|NLE1|54475|notchless homolog 1 (Drosophila)##AK313775|FNDC8|54752|fibronectin type III domain containing 8##NM_017559|FNDC8|54752|fibronectin type III domain containing 8##BC024002|FNDC8|54752|fibronectin type III domain containing 8##AK225743|FNDC8|54752|fibronectin type III domain containing 8##AL133054|FNDC8|54752|fibronectin type III domain containing 8##EU831600|FNDC8|54752|fibronectin type III domain containing 8##EU831687|FNDC8|54752|fibronectin type III domain containing 8##AK097473|SLC35G3|146861|solute carrier family 35, member G3##BC136422|SLC35G3|146861|solute carrier family 35, member G3##BC140700|SLC35G3|146861|solute carrier family 35, member G3##NM_152462|SLC35G3|146861|solute carrier family 35, member G3##NM_144975|SLFN5|162394|schlafen family member 5##AK303632|SLFN5|162394|schlafen family member 5##BX647942|SLFN5|162394|schlafen family member 5##AK054668|SLFN5|162394|schlafen family member 5##AK303299|SLFN5|162394|schlafen family member 5##BC021238|SLFN5|162394|schlafen family member 5##AL831964|SLFN11|91607|schlafen family member 11##BC052586|SLFN11|91607|schlafen family member 11##AK092241|SLFN11|91607|schlafen family member 11##NM_001104587|SLFN11|91607|schlafen family member 11##NM_001104588|SLFN11|91607|schlafen family member 11##NM_001104589|SLFN11|91607|schlafen family member 11##NM_001104590|SLFN11|91607|schlafen family member 11##NM_152270|SLFN11|91607|schlafen family member 11	0.985657	CTCF.p2:0:0.986
chr1	44399996	44400107	reg1004137.p1	10.272	+	AF120274 NM_001136215 NM_057090 NM_057091	-1060	+	AK301829 AY051143 NM_006279 NM_174963 NM_174964 NM_174965 NM_174966 NM_174967 NM_174968 NM_174969 NM_174970 NM_174971 TSC_hg19_v1_chr1_+_44173217 BC050380	-226833	+	TSC_hg19_v1_chr1_-_44173037 BC094867	-227028	-	TSC_hg19_v1_chr1_+_44412483 NM_014652	12410	+	TSC_hg19_v1_chr1_+_44412625 AB018267	12559	+	TSC_hg19_v1_chr1_+_44412640 BC008194	12611	+	AF120274|ARTN|9048|artemin##NM_001136215|ARTN|9048|artemin##NM_057090|ARTN|9048|artemin##NM_057091|ARTN|9048|artemin##AK301829|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##AY051143|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_006279|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174963|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174964|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174965|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174966|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174967|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174968|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174969|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174970|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174971|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC050380|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC094867|LOC100132774|100132774|uncharacterized LOC100132774##NM_014652|IPO13|9670|importin 13##AB018267|IPO13|9670|importin 13##BC008194|IPO13|9670|importin 13	0.102777	
chr4	185021562	185021692	reg1014185.p1	10.272	+	TSC_hg19_v1_chr4_+_184827885 AB384196	-193716	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-193807	+	TSC_hg19_v1_chr4_+_184826513 AB037813 BC146754 NM_020225	-195121	+	BC035035 AY358676 AK057370 NM_153343	117438	-	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	374054	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	548974	-	AK289840|STOX2|56977|storkhead box 2##AB037813|STOX2|56977|storkhead box 2##BC146754|STOX2|56977|storkhead box 2##NM_020225|STOX2|56977|storkhead box 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase	0.955066	CTCF.p2:6:0.955
chr16	21946518	21946626	reg1011974.p1	10.271	+	AK316459 AK296301 AK303500 AK301703 AK294452 TSC_hg19_v1_chr16_-_21854901	-91744	-	BC009198 BC068999 TSC_hg19_v1_chr16_-_21831777 BC070157	-114812	-	AK093062 AX747895 NM_170664 BC040551 AK302733	-230255	+	NM_003366 AK307535 TSC_hg19_v1_chr16_+_21964618	18056	+	TSC_hg19_v1_chr16_+_21964679 J04973 BC003136	18113	+	TSC_hg19_v1_chr16_+_21964701 AB587386 DQ891390 DQ894565	18149	+	AK316459|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296301|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AK303500|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK301703|LOC613037|613037|nuclear pore complex interacting protein pseudogene##AK294452|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BC009198|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC068999|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC070157|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##AK093062|OTOA|146183|otoancorin##NM_170664|OTOA|146183|otoancorin##BC040551|OTOA|146183|otoancorin##AK302733|OTOA|146183|otoancorin##NM_003366|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##AK307535|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##J04973|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##BC003136|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##DQ891390|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##DQ894565|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II	0.012877	
chr16	67528030	67528167	reg1011860.p1	10.271	+	NM_001138 U88063	-10383	-	CU679153 DQ893270 DQ896601 X71490 TSC_hg19_v1_chr16_-_67515051 AK300570 AK313035 AK125522 BC008861 NM_004691	-13054	-	TSC_hg19_v1_chr16_+_67465023 U26726 BC036780 BC064536 NM_000196 U14631	-63068	+	TSC_hg19_v1_chr16_+_67562734 NM_024519 AK127792 NM_001193522 AK307467 BC012730	34643	+	NM_001193523 AK293748	35486	+	TSC_hg19_v1_chr16_+_67571364 NM_001193524 BC021284 AK295677	43289	+	NM_001138|AGRP|181|agouti related protein homolog (mouse)##U88063|AGRP|181|agouti related protein homolog (mouse)##DQ893270|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##DQ896601|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##X71490|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK300570|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK313035|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK125522|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##BC008861|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_004691|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_024519|FAM65A|79567|family with sequence similarity 65, member A##AK127792|FAM65A|79567|family with sequence similarity 65, member A##NM_001193522|FAM65A|79567|family with sequence similarity 65, member A##AK307467|FAM65A|79567|family with sequence similarity 65, member A##NM_001193523|FAM65A|79567|family with sequence similarity 65, member A##AK293748|FAM65A|79567|family with sequence similarity 65, member A##NM_001193524|FAM65A|79567|family with sequence similarity 65, member A##AK295677|FAM65A|79567|family with sequence similarity 65, member A	0.968165	CTCF.p2:-23:0.968
chr6_ssto_hap7	2850073	2850186	reg1013047.p1	10.271	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.44778	CTCF.p2:-6:0.429
chrX	20548586	20548711	reg1010826.p1	10.271	+	TSC_hg19_v1_chrX_-_20285141 AK294373	-263484	-	TSC_hg19_v1_chrX_-_20285001 AB208933	-263691	-	AB102662 L07599 AB384785 BC096301 BC096302 BC096303 NM_004586 U08316 AK313932	-263918	-	TSC_hg19_v1_chrX_+_21392535 NM_001168647 NM_001168648 NM_001168649 NM_014927 AB020709 AK294728	843860	+	BC109031 AK092279 AX747450 NM_153270	1127783	-	BC005948 AF129505 AJ250584 NM_014332 AK312134	1227569	-	AK294373|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AB208933|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AB102662|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##L07599|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096301|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096302|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096303|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##NM_004586|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##U08316|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AK313932|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##NM_001168647|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168648|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168649|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_014927|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AB020709|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AK294728|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##BC109031|KLHL34|257240|kelch-like 34 (Drosophila)##AK092279|KLHL34|257240|kelch-like 34 (Drosophila)##NM_153270|KLHL34|257240|kelch-like 34 (Drosophila)##BC005948|SMPX|23676|small muscle protein, X-linked##AF129505|SMPX|23676|small muscle protein, X-linked##AJ250584|SMPX|23676|small muscle protein, X-linked##NM_014332|SMPX|23676|small muscle protein, X-linked##AK312134|SMPX|23676|small muscle protein, X-linked	0.831779	CTCF.p2:-27:0.832
chr2	179261859	179261989	reg1010290.p1	10.270	+	AK093902 AX748360 NM_145739	-76954	+	TSC_hg19_v1_chr2_+_179059238 AB208898 NM_001201480 NM_001201481 NM_001201482 NM_032523 BC052259 AK300389 AF323728 AF392448	-202700	+	AF526533 BC037837 BC066549 NM_152945 TSC_hg19_v1_chr2_+_178977198 AK126575 AB036991 CU688160	-284713	+	TSC_hg19_v1_chr2_+_179278403 BX538254	16480	+	AY251164 NM_001139518 TSC_hg19_v1_chr2_-_179315397 NM_001139517	53494	-	BT007243 CR533525 EU831635 EU831719 AB590648 CU679369 TSC_hg19_v1_chr2_-_179315881 AF072860 AF083033 AK223107 BC009470 AK296019 AL136615 AK290601 NM_003690	53932	-	AK093902|OSBPL6|114880|oxysterol binding protein-like 6##NM_145739|OSBPL6|114880|oxysterol binding protein-like 6##AB208898|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201480|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201481|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201482|OSBPL6|114880|oxysterol binding protein-like 6##NM_032523|OSBPL6|114880|oxysterol binding protein-like 6##BC052259|OSBPL6|114880|oxysterol binding protein-like 6##AK300389|OSBPL6|114880|oxysterol binding protein-like 6##AF323728|OSBPL6|114880|oxysterol binding protein-like 6##AF392448|OSBPL6|114880|oxysterol binding protein-like 6##AF526533|RBM45|129831|RNA binding motif protein 45##BC037837|RBM45|129831|RNA binding motif protein 45##BC066549|RBM45|129831|RNA binding motif protein 45##NM_152945|RBM45|129831|RNA binding motif protein 45##AK126575|RBM45|129831|RNA binding motif protein 45##AB036991|RBM45|129831|RNA binding motif protein 45##AY251164|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_001139518|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_001139517|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##BT007243|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##CR533525|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##EU831635|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##EU831719|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AF072860|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AF083033|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK223107|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##BC009470|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK296019|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AL136615|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK290601|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_003690|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator	0.997746	CTCF.p2:5:0.998
chr11	31128644	31128786	reg1013282.p1	10.269	+	BX647348 NM_020869	-114483	-	TSC_hg19_v1_chr11_-_30607762 AB209163 AK314833 NM_001145399	-520870	-	TSC_hg19_v1_chr11_-_30605748 AK309809	-522967	-	AY247970 AK126066 NM_181807	262623	-	TSC_hg19_v1_chr11_+_31391404 NM_181706 AK123087 AL833128 AK289665 BC036571 BC044931 BC063804	262687	+	AK311611 BC023595 TSC_hg19_v1_chr11_-_31531154 AK310496 AK057788 NM_144981	402429	-	BX647348|DCDC5|100506627|doublecortin domain containing 5##NM_020869|DCDC5|100506627|doublecortin domain containing 5##AB209163|MPPED2|744|metallophosphoesterase domain containing 2##AK314833|MPPED2|744|metallophosphoesterase domain containing 2##NM_001145399|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2##AY247970|DCDC1|341019|doublecortin domain containing 1##NM_181807|DCDC1|341019|doublecortin domain containing 1##NM_181706|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK123087|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AL833128|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK289665|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC036571|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC044931|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC063804|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK311611|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC023595|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK310496|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK057788|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_144981|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	0.960995	CTCF.p2:0:0.961
chr1	149272958	149273087	reg1011870.p1	10.269	+	NM_001164261 NM_001164262	-467008	+	NM_001102663 AK290302 AY894562 AY894566	-533521	+	NM_001144032	-629012	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	126174	-	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	280001	+	X14355 AK311303 NM_000566 X14356 AK291451 BC032634 AB527585 BC152383 CU689454 DQ890842 DQ893997 L03418	481250	+	NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001144032|PPIAL4E|730262|peptidylprolyl isomerase A (cyclophilin A)-like 4E##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##X14355|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##NM_000566|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##X14356|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK291451|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC032634|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC152383|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ890842|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ893997|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##L03418|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)	0.785704	CTCF.p2:11:0.786
chr10	98785521	98785639	reg1011491.p1	10.268	+	AK126886 BC024315 NM_015652 CU692918	-44513	+	TSC_hg19_v1_chr10_+_98592758 NM_032440 AL834245 AB058698	-192852	+	TSC_hg19_v1_chr10_-_98592186 AB593180	-193380	-	AY029183 AB383997 TSC_hg19_v1_chr10_-_98945570	159894	-	TSC_hg19_v1_chr10_-_98945606 BC146851	160015	-	AB017167 TSC_hg19_v1_chr10_-_98945702 BC028105 AB011537 BC146761 NM_003061 BC139909	160105	-	AK126886|C10orf12|26148|chromosome 10 open reading frame 12##BC024315|C10orf12|26148|chromosome 10 open reading frame 12##NM_015652|C10orf12|26148|chromosome 10 open reading frame 12##NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor##AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor##AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor##AY029183|SLIT1|6585|slit homolog 1 (Drosophila)##BC146851|SLIT1|6585|slit homolog 1 (Drosophila)##AB017167|SLIT1|6585|slit homolog 1 (Drosophila)##BC028105|SLIT1|6585|slit homolog 1 (Drosophila)##AB011537|SLIT1|6585|slit homolog 1 (Drosophila)##BC146761|SLIT1|6585|slit homolog 1 (Drosophila)##NM_003061|SLIT1|6585|slit homolog 1 (Drosophila)##BC139909|SLIT1|6585|slit homolog 1 (Drosophila)	0.187618	
chrX	49865014	49865121	reg1007446.p1	10.267	+	NM_000084 AK308089 TSC_hg19_v1_chrX_+_49832243 AK290940	-32822	+	TSC_hg19_v1_chrX_+_49687274 AK092049 NM_001127898 NM_001127899 AK056560	-177821	+	NM_001145073	-220598	+	NM_139289 BC033007 BC070150 TSC_hg19_v1_chrX_-_49965024	99946	-	AK292463 BC126250 BC126252 NM_003886 Y15195	100593	-	AJ314764 AJ314765 AJ314766 AJ416458 NM_033031 NM_033670	162472	+	NM_000084|CLCN5|1184|chloride channel 5##AK308089|CLCN5|1184|chloride channel 5##AK290940|CLCN5|1184|chloride channel 5##AK092049|CLCN5|1184|chloride channel 5##NM_001127898|CLCN5|1184|chloride channel 5##NM_001127899|CLCN5|1184|chloride channel 5##AK056560|CLCN5|1184|chloride channel 5##NM_001145073|USP27X|389856|ubiquitin specific peptidase 27, X-linked##NM_139289|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC033007|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC070150|AKAP4|8852|A kinase (PRKA) anchor protein 4##AK292463|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC126250|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC126252|AKAP4|8852|A kinase (PRKA) anchor protein 4##NM_003886|AKAP4|8852|A kinase (PRKA) anchor protein 4##Y15195|AKAP4|8852|A kinase (PRKA) anchor protein 4##AJ314764|CCNB3|85417|cyclin B3##AJ314765|CCNB3|85417|cyclin B3##AJ314766|CCNB3|85417|cyclin B3##AJ416458|CCNB3|85417|cyclin B3##NM_033031|CCNB3|85417|cyclin B3##NM_033670|CCNB3|85417|cyclin B3	0.982092	CTCF.p2:-18:0.982
chr15	78931184	78931343	reg1010770.p1	10.266	+	TSC_hg19_v1_chr15_-_78913532 BC098443 BC006114 NM_000743 NM_001166694	-17691	-	AF385584 Y08418 BT006646 BT006897 CU674246 CU675253 M86383 M37981 TSC_hg19_v1_chr15_-_78913298 BC000513 BC001642 BC002996 U62432	-18030	-	TSC_hg19_v1_chr15_+_78857888 NM_000745 BC033639 U62434 AF385586 M83712 CU689678 DQ893355 DQ896674 EU176798 Y08419	-73319	+	TSC_hg19_v1_chr15_-_78933573 U62439 Y08416 BC096080 BC096081 BC096082 BC096083 NM_000750 U48861	2310	-	TSC_hg19_v1_chr15_+_79102818 AK095823	171564	+	AY327122 AF140675 TSC_hg19_v1_chr15_-_79103698 BC061631 NM_014272 AK299844	172487	-	BC098443|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC006114|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_000743|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_001166694|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AF385584|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##Y08418|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006646|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006897|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##M37981|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC000513|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC001642|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC002996|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##U62432|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_000745|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##BC033639|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##U62434|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##AF385586|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##M83712|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##DQ893355|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##DQ896674|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##EU176798|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##Y08419|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##U62439|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##Y08416|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096080|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096081|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096082|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096083|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##NM_000750|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##U48861|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##AK095823|MORF4L1|10933|mortality factor 4 like 1##AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7	1.678102	CTCF.p2:-3:0.973	CTCF.p2:-103:0.596
chr17	10534507	10534633	reg1010068.p2	10.266	+	NM_001100112 BC093082 AK299440 AK300702 AK308102 BX510904 NM_017534	-81593	-	AK310004 NM_005963	-112712	-	AF111783 NM_017533	-161695	-	NM_002470 TSC_hg19_v1_chr17_-_10560627	26057	-	TSC_hg19_v1_chr17_-_10600869 DQ891605 DQ894798 AF026852 AF183424 BC015504 AK098826 AK315595 AK074588 NM_004589	66283	-	NM_020233 BC070155 AB073393 AK292629 BC001294	66378	+	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult##NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult##AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_002470|MYH3|4621|myosin, heavy chain 3, skeletal muscle, embryonic##DQ891605|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##DQ894798|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF026852|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF183424|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##BC015504|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK098826|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK315595|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK074588|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_004589|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_020233|C17orf48|56985|chromosome 17 open reading frame 48##BC070155|C17orf48|56985|chromosome 17 open reading frame 48##AB073393|C17orf48|56985|chromosome 17 open reading frame 48##AK292629|C17orf48|56985|chromosome 17 open reading frame 48##BC001294|C17orf48|56985|chromosome 17 open reading frame 48	0.893651	CTCF.p2:-10:0.894
chr17	4636632	4636769	reg1011058.p1	10.266	+	BC070377 NM_001001683 TSC_hg19_v1_chr17_+_4634722 AF161414	-1964	+	TSC_hg19_v1_chr17_+_4613946 BC007427 BC067368 AF106941 CR749218 AB209786 AK290951 AK297181 BC095450 DQ893226 DQ896556 EU176778 AB527599 CR450310 DQ664180 EU883572 Z11501 BC039066	-22722	+	TSC_hg19_v1_chr17_+_4613926 NM_004313 NM_199004 AK297059 AK097542	-22846	+	AF337812 AB463490 CU676014 AF275260 TSC_hg19_v1_chr17_-_4643066 BC044930 AK292114 AY358909 AF301016 AK027389	6190	-	TSC_hg19_v1_chr17_-_4643224 BC017588 AK315017 NM_001100812 NM_022059	6519	-	AK302181 NM_001136046 AK310469 AL136893 NM_032265	6627	+	BC070377|MED11|400569|mediator complex subunit 11##NM_001001683|MED11|400569|mediator complex subunit 11##AF161414|MED11|400569|mediator complex subunit 11##BC007427|ARRB2|409|arrestin, beta 2##BC067368|ARRB2|409|arrestin, beta 2##AF106941|ARRB2|409|arrestin, beta 2##CR749218|ARRB2|409|arrestin, beta 2##AB209786|ARRB2|409|arrestin, beta 2##AK290951|ARRB2|409|arrestin, beta 2##AK297181|ARRB2|409|arrestin, beta 2##BC095450|ARRB2|409|arrestin, beta 2##DQ893226|ARRB2|409|arrestin, beta 2##DQ896556|ARRB2|409|arrestin, beta 2##EU176778|ARRB2|409|arrestin, beta 2##CR450310|ARRB2|409|arrestin, beta 2##DQ664180|ARRB2|409|arrestin, beta 2##EU883572|ARRB2|409|arrestin, beta 2##Z11501|ARRB2|409|arrestin, beta 2##BC039066|ARRB2|409|arrestin, beta 2##NM_004313|ARRB2|409|arrestin, beta 2##NM_199004|ARRB2|409|arrestin, beta 2##AK297059|ARRB2|409|arrestin, beta 2##AK097542|ARRB2|409|arrestin, beta 2##AF337812|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AF275260|CXCL16|58191|chemokine (C-X-C motif) ligand 16##BC044930|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AK292114|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AY358909|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AF301016|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AK027389|CXCL16|58191|chemokine (C-X-C motif) ligand 16##BC017588|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AK315017|CXCL16|58191|chemokine (C-X-C motif) ligand 16##NM_001100812|CXCL16|58191|chemokine (C-X-C motif) ligand 16##NM_022059|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AK302181|ZMYND15|84225|zinc finger, MYND-type containing 15##NM_001136046|ZMYND15|84225|zinc finger, MYND-type containing 15##AK310469|ZMYND15|84225|zinc finger, MYND-type containing 15##AL136893|ZMYND15|84225|zinc finger, MYND-type containing 15##NM_032265|ZMYND15|84225|zinc finger, MYND-type containing 15	0.0	
chr4	184183704	184183821	reg1011258.p3	10.266	+	TSC_hg19_v1_chr4_+_184020431 NM_024949	-163284	+	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	-345128	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	-345232	-	NM_001111319	58164	-	NM_001185149	59816	-	TSC_hg19_v1_chr4_+_184365788 AK000043 NM_017632	182024	+	NM_024949|WWC2|80014|WW and C2 domain containing 2##NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001111319|CLDN22|53842|claudin 22##NM_001185149|CLDN24|100132463|claudin 24##AK000043|CDKN2AIP|55602|CDKN2A interacting protein##NM_017632|CDKN2AIP|55602|CDKN2A interacting protein	0.769404	CTCF.p2:14:0.769
chr11	8285459	8285586	reg1011224.p1	10.265	+	BC069752 BC069793 M26682 NM_002315	-170	-	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	-94959	-	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-182723	+	AK093251 AX748014 BC031231 NM_030906	329935	-	AK293193 TSC_hg19_v1_chr11_-_8615705	330181	-	TSC_hg19_v1_chr11_-_8615752 AK092720 AX747689 AK310754	330253	-	BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33##AK293193|STK33|65975|serine/threonine kinase 33##AK092720|STK33|65975|serine/threonine kinase 33##AK310754|STK33|65975|serine/threonine kinase 33	0.986931	CTCF.p2:12:0.987
chr22	25334859	25334998	reg1011497.p1	10.265	+	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-132718	+	AB079368 NM_001008496 AK302409 AK315806	-164244	-	TSC_hg19_v1_chr22_+_25003637 NM_001032365	-331305	+	BC130647 BC130649 CR456388 NM_001001663	384	-	BC171801 NM_001145206	89012	+	TSC_hg19_v1_chr22_+_25591072 AK025418	256201	+	NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AB079368|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001008496|PIWIL3|440822|piwi-like 3 (Drosophila)##AK302409|PIWIL3|440822|piwi-like 3 (Drosophila)##AK315806|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001032365|GGT1|2678|gamma-glutamyltransferase 1##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##AK025418|KIAA1671|85379|KIAA1671	0.999564	CTCF.p2:-10:1.000
chr12	98354920	98355033	reg1009985.p1	10.264	+	BC027605 NM_001135175	-1053733	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-1053945	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-1560659	-	TSC_hg19_v1_chr12_-_98897622 AK126817	542651	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	554391	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	554431	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.750035	CTCF.p2:8:0.750
chr1	54955189	54955317	reg1010532.p2	10.264	+	TSC_hg19_v1_chr1_-_54872087 NM_001009955	-83169	-	NM_018070 NM_145716 TSC_hg19_v1_chr1_-_54872066	-83231	-	CU688156 AK289474 BC003605 BC127866 BC066365 TSC_hg19_v1_chr1_-_54871828 AF500116	-83465	-	TSC_hg19_v1_chr1_+_55007956 AK091112	52708	+	NM_015547 NM_147161 TSC_hg19_v1_chr1_+_55013900 BC001517 AK023937 AK223570 AB014607 BC093844 BC093846 AF416921 AF416922	58641	+	CU676764 AY358629 BC015993 BC020874 NM_176782 AK091901 AX747244	133895	-	NM_001009955|SSBP3|23648|single stranded DNA binding protein 3##NM_018070|SSBP3|23648|single stranded DNA binding protein 3##NM_145716|SSBP3|23648|single stranded DNA binding protein 3##AK289474|SSBP3|23648|single stranded DNA binding protein 3##BC003605|SSBP3|23648|single stranded DNA binding protein 3##BC066365|SSBP3|23648|single stranded DNA binding protein 3##AF500116|SSBP3|23648|single stranded DNA binding protein 3##AK091112|ACOT11|26027|acyl-CoA thioesterase 11##NM_015547|ACOT11|26027|acyl-CoA thioesterase 11##NM_147161|ACOT11|26027|acyl-CoA thioesterase 11##BC001517|ACOT11|26027|acyl-CoA thioesterase 11##AK023937|ACOT11|26027|acyl-CoA thioesterase 11##AK223570|ACOT11|26027|acyl-CoA thioesterase 11##AB014607|ACOT11|26027|acyl-CoA thioesterase 11##BC093844|ACOT11|26027|acyl-CoA thioesterase 11##BC093846|ACOT11|26027|acyl-CoA thioesterase 11##AF416921|ACOT11|26027|acyl-CoA thioesterase 11##AF416922|ACOT11|26027|acyl-CoA thioesterase 11##AY358629|FAM151A|338094|family with sequence similarity 151, member A##BC015993|FAM151A|338094|family with sequence similarity 151, member A##BC020874|FAM151A|338094|family with sequence similarity 151, member A##NM_176782|FAM151A|338094|family with sequence similarity 151, member A##AK091901|FAM151A|338094|family with sequence similarity 151, member A	0.950448	CTCF.p2:-2:0.950
chr16	12043629	12043702	reg1007226.p1	10.264	+	NM_001130007	-33147	-	TSC_hg19_v1_chr16_-_12009919 AK315267	-33737	-	TSC_hg19_v1_chr16_-_12009814 X17644 NM_001130006 NM_002094	-33827	-	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	15419	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	26908	+	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	853986	-	NM_001130007|GSPT1|2935|G1 to S phase transition 1##AK315267|GSPT1|2935|G1 to S phase transition 1##X17644|GSPT1|2935|G1 to S phase transition 1##NM_001130006|GSPT1|2935|G1 to S phase transition 1##NM_002094|GSPT1|2935|G1 to S phase transition 1##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1	0.0	
chr3	93723287	93723421	reg1013611.p1	10.264	+	TSC_hg19_v1_chr3_+_93698998 BC073842 NM_001174150 NM_001174151 NM_144996 NM_182896 CR936753 BC094725 BC104033 BC104034 BC104035 BC104036 AK299284 BC031093 AK296994 BC062993 BC015439 CR936763 AL713789 CR936756	-24327	+	TSC_hg19_v1_chr3_-_93692932 BC015801 NM_000313	-30436	-	AB590252 DQ892389 DQ895602 TSC_hg19_v1_chr3_-_93692741 Y00692 AK292994	-30678	-	BC034696 NM_001001850 TSC_hg19_v1_chr3_-_93747472	24110	-	BC045541 TSC_hg19_v1_chr3_-_93781761 AL832912 BC063379 NM_176815	58390	-	TSC_hg19_v1_chr3_+_93781863 AF169972 BC018432 BC020602 BC057238 NM_022072 AK026262	58490	+	BC073842|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174150|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174151|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_144996|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_182896|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936753|ARL13B|200894|ADP-ribosylation factor-like 13B##BC094725|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104033|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104034|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104035|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104036|ARL13B|200894|ADP-ribosylation factor-like 13B##AK299284|ARL13B|200894|ADP-ribosylation factor-like 13B##BC031093|ARL13B|200894|ADP-ribosylation factor-like 13B##AK296994|ARL13B|200894|ADP-ribosylation factor-like 13B##BC062993|ARL13B|200894|ADP-ribosylation factor-like 13B##BC015439|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936763|ARL13B|200894|ADP-ribosylation factor-like 13B##AL713789|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936756|ARL13B|200894|ADP-ribosylation factor-like 13B##BC015801|PROS1|5627|protein S (alpha)##NM_000313|PROS1|5627|protein S (alpha)##DQ892389|PROS1|5627|protein S (alpha)##DQ895602|PROS1|5627|protein S (alpha)##Y00692|PROS1|5627|protein S (alpha)##AK292994|PROS1|5627|protein S (alpha)##BC034696|STX19|415117|syntaxin 19##NM_001001850|STX19|415117|syntaxin 19##BC045541|DHFRL1|200895|dihydrofolate reductase-like 1##AL832912|DHFRL1|200895|dihydrofolate reductase-like 1##BC063379|DHFRL1|200895|dihydrofolate reductase-like 1##NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1##AF169972|NSUN3|63899|NOP2/Sun domain family, member 3##BC018432|NSUN3|63899|NOP2/Sun domain family, member 3##BC020602|NSUN3|63899|NOP2/Sun domain family, member 3##BC057238|NSUN3|63899|NOP2/Sun domain family, member 3##NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3##AK026262|NSUN3|63899|NOP2/Sun domain family, member 3	0.829063	CTCF.p2:-9:0.829
chr6	155126557	155126668	reg1012016.p1	10.264	+	TSC_hg19_v1_chr6_+_155054812 AB029039	-71787	+	AK295651 AK303001 AK307815 TSC_hg19_v1_chr6_+_155054549 BC032728	-72058	+	BC070071 NM_014892 TSC_hg19_v1_chr6_+_155054540 AK302969	-72087	+	NM_012454	284810	+	NM_001010927 AK299723 BC066979 AF120324 BC022469	411516	+	BC020838 NM_001001346	458534	+	AB029039|SCAF8|22828|SR-related CTD-associated factor 8##AK295651|SCAF8|22828|SR-related CTD-associated factor 8##AK303001|SCAF8|22828|SR-related CTD-associated factor 8##AK307815|SCAF8|22828|SR-related CTD-associated factor 8##BC032728|SCAF8|22828|SR-related CTD-associated factor 8##BC070071|SCAF8|22828|SR-related CTD-associated factor 8##NM_014892|SCAF8|22828|SR-related CTD-associated factor 8##AK302969|SCAF8|22828|SR-related CTD-associated factor 8##NM_012454|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC020838|CLDN20|49861|claudin 20##NM_001001346|CLDN20|49861|claudin 20	0.117136	
chr8	126741616	126741756	reg1012767.p1	10.263	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-299107	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-637589	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-637629	-	TSC_hg19_v1_chr8_-_126963395 BX648371	221727	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	828869	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	829038	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.989875	CTCF.p2:-8:0.990
chr17	36762735	36762867	reg1010641.p2	10.262	+	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	-605	-	BC029278 TSC_hg19_v1_chr17_-_36760969	-1863	-	TSC_hg19_v1_chr17_-_36729122 AK295027	-33679	-	TSC_hg19_v1_chr17_-_36831211 NM_001130677	68384	-	TSC_hg19_v1_chr17_+_36861421 BC064612	98798	+	TSC_hg19_v1_chr17_+_36861879 AK310435 AK310437 NM_005937 AB384930 CU687922 U07932 AB209633	99089	+	AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96##BC064612|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	0.995586	CTCF.p2:-29:0.996
chr3	124647603	124647715	reg1010202.p2	10.262	+	TSC_hg19_v1_chr3_-_124606213 BC006541 NM_002213 X53002	-41448	-	TSC_hg19_v1_chr3_-_124605863 AB587397 DQ892778 DQ896025 M35011 AK315429 J05633	-41793	-	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	-198343	+	AF286113 AB035807 AY358831 TSC_hg19_v1_chr3_-_124653596 NM_033049	5924	-	BC067235 TSC_hg19_v1_chr3_-_124732404	84733	-	AB384586 NM_020733 TSC_hg19_v1_chr3_-_124774842	127141	-	BC006541|ITGB5|3693|integrin, beta 5##NM_002213|ITGB5|3693|integrin, beta 5##X53002|ITGB5|3693|integrin, beta 5##DQ892778|ITGB5|3693|integrin, beta 5##DQ896025|ITGB5|3693|integrin, beta 5##M35011|ITGB5|3693|integrin, beta 5##AK315429|ITGB5|3693|integrin, beta 5##J05633|ITGB5|3693|integrin, beta 5##AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase##AF286113|MUC13|56667|mucin 13, cell surface associated##AB035807|MUC13|56667|mucin 13, cell surface associated##AY358831|MUC13|56667|mucin 13, cell surface associated##NM_033049|MUC13|56667|mucin 13, cell surface associated##BC067235|HEG1|57493|HEG homolog 1 (zebrafish)##NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)	0.984931	CTCF.p2:-6:0.985
chr1	50814492	50814613	reg1010020.p2	10.261	+	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-239014	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-239868	+	TSC_hg19_v1_chr1_+_50574591 NM_001144774 NM_021952	-239961	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	74559	-	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	611025	-	TSC_hg19_v1_chr1_-_51425740 BC067100	611204	-	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_032110|DMRTA2|63950|DMRT-like family A2##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.999074	CTCF.p2:8:0.999
chr6	32952689	32952815	reg1013718.p1	10.261	+	BX647233 NM_001199456	-11892	+	TSC_hg19_v1_chr6_+_32939974 BC007715 BC001885 BC000477	-12764	+	NM_001199455	-13381	+	CU680544 DQ891048 DQ894226 AY947479 AY947480 AY947481 AY947482 BC013183 M26039 TSC_hg19_v1_chr6_-_32977339 AK310153 AK313551	24574	-	AK301404 TSC_hg19_v1_chr6_-_32977369 M38056 AK290714 M31525 NM_002119	24617	-	X00457 AB590198 CU679537 DQ893463 DQ896324 AB209058 AK292709 TSC_hg19_v1_chr6_-_33041427 BC009956 M27487 NM_033554	88616	-	BX647233|BRD2|6046|bromodomain containing 2##NM_001199456|BRD2|6046|bromodomain containing 2##BC007715|BRD2|6046|bromodomain containing 2##BC001885|BRD2|6046|bromodomain containing 2##BC000477|BRD2|6046|bromodomain containing 2##NM_001199455|BRD2|6046|bromodomain containing 2##DQ891048|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##DQ894226|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AY947479|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AY947480|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AY947481|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AY947482|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##BC013183|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##M26039|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AK310153|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AK313551|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AK301404|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##M38056|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AK290714|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##M31525|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##NM_002119|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##X00457|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ893463|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ896324|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AB209058|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AK292709|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##BC009956|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##M27487|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_033554|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1	1.003703	CTCF.p2:14:0.960
chr17	47781334	47781452	reg1007944.p1	10.260	+	TSC_hg19_v1_chr17_-_47755471 BC003385 AK222589 AK312691 AJ000644 AK303268 AK316366 BC001269 AK293587 AK300616 NM_001007226 NM_001007227 NM_001007228 NM_001007229 NM_001007230 NM_003563	-25961	-	TSC_hg19_v1_chr17_+_47653475 BC022541 AK308928 AY358526 AB385434	-127866	+	TSC_hg19_v1_chr17_+_47653192 AL834282 NM_007225	-128157	+	AK098056 CU680094 DQ893425 EU176812 TSC_hg19_v1_chr17_-_47785254	3800	-	TSC_hg19_v1_chr17_-_47785283 AK296073 D87989 NM_005827 BC011888 AK293563	3905	-	BX641166 TSC_hg19_v1_chr17_-_47785555	4157	-	BC003385|SPOP|8405|speckle-type POZ protein##AK222589|SPOP|8405|speckle-type POZ protein##AK312691|SPOP|8405|speckle-type POZ protein##AJ000644|SPOP|8405|speckle-type POZ protein##AK303268|SPOP|8405|speckle-type POZ protein##AK316366|SPOP|8405|speckle-type POZ protein##BC001269|SPOP|8405|speckle-type POZ protein##AK293587|SPOP|8405|speckle-type POZ protein##AK300616|SPOP|8405|speckle-type POZ protein##NM_001007226|SPOP|8405|speckle-type POZ protein##NM_001007227|SPOP|8405|speckle-type POZ protein##NM_001007228|SPOP|8405|speckle-type POZ protein##NM_001007229|SPOP|8405|speckle-type POZ protein##NM_001007230|SPOP|8405|speckle-type POZ protein##NM_003563|SPOP|8405|speckle-type POZ protein##BC022541|NXPH3|11248|neurexophilin 3##AK308928|NXPH3|11248|neurexophilin 3##AY358526|NXPH3|11248|neurexophilin 3##AL834282|NXPH3|11248|neurexophilin 3##NM_007225|NXPH3|11248|neurexophilin 3##AK098056|SLC35B1|10237|solute carrier family 35, member B1##DQ893425|SLC35B1|10237|solute carrier family 35, member B1##EU176812|SLC35B1|10237|solute carrier family 35, member B1##AK296073|SLC35B1|10237|solute carrier family 35, member B1##D87989|SLC35B1|10237|solute carrier family 35, member B1##NM_005827|SLC35B1|10237|solute carrier family 35, member B1##BC011888|SLC35B1|10237|solute carrier family 35, member B1##AK293563|SLC35B1|10237|solute carrier family 35, member B1##BX641166|SLC35B1|10237|solute carrier family 35, member B1	0.8563	CTCF.p2:31:0.856
chr3	79895838	79895966	reg1013268.p1	10.260	+	NM_002941	-78844	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-827315	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-1228917	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	1914795	-	TSC_hg19_v1_chr3_-_81810798 AK312245	1914896	-	TSC_hg19_v1_chr3_-_81810802 AK297939	1914903	-	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.873821	CTCF.p2:-1:0.874
chr6	130342281	130342422	reg1008946.p1	10.260	+	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	-2626	+	NM_001010876	-159936	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	-311025	-	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	194104	-	AK091882 AX747235 NM_001017373	201747	-	AB052099 NM_052913	415910	+	AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A	0.207407	CTCF.p2:16:0.207
chr8	12523100	12523234	reg1011756.p1	10.260	+	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-229263	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-229324	-	DQ012022 NM_001037804 NM_001195257	-347343	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	89837	-	AK296010 NM_020844	279999	+	AB040889 NM_001099677	346605	+	BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456	0.999649	CTCF.p2:10:1.000
chr9	116352342	116352441	reg1010098.p2	10.260	+	U27655 AK125094 TSC_hg19_v1_chr9_+_116343207	-9203	+	AF006609 NM_021106	-9452	+	TSC_hg19_v1_chr9_+_116327336 AK289666 AK301515 AK310705 NM_134427	-25059	+	AF490838 NM_144489 AK054584	3819	+	TSC_hg19_v1_chr9_+_116356408 BC018072 BC019039 CU676160	4090	+	TSC_hg19_v1_chr9_+_116638585 BC036039 NM_133374 BC136287 BC143826 AK126896 BC053892	286208	+	U27655|RGS3|5998|regulator of G-protein signaling 3##AK125094|RGS3|5998|regulator of G-protein signaling 3##AF006609|RGS3|5998|regulator of G-protein signaling 3##NM_021106|RGS3|5998|regulator of G-protein signaling 3##AK289666|RGS3|5998|regulator of G-protein signaling 3##AK301515|RGS3|5998|regulator of G-protein signaling 3##AK310705|RGS3|5998|regulator of G-protein signaling 3##NM_134427|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3##BC018072|RGS3|5998|regulator of G-protein signaling 3##BC019039|RGS3|5998|regulator of G-protein signaling 3##BC036039|ZNF618|114991|zinc finger protein 618##NM_133374|ZNF618|114991|zinc finger protein 618##BC136287|ZNF618|114991|zinc finger protein 618##BC143826|ZNF618|114991|zinc finger protein 618##AK126896|ZNF618|114991|zinc finger protein 618##BC053892|ZNF618|114991|zinc finger protein 618	0.254108	CTCF.p2:4:0.254
chr19	10652238	10652351	reg1010520.p1	10.259	+	AK074661 NM_001166215	-23658	-	BC034703 AK094880 BC067781 NM_030760	-24176	-	TSC_hg19_v1_chr19_-_10625679 AB385542 DQ891290 DQ893341 DQ894474 DQ896661 AF331840 AF331841 AF331842	-26607	-	AK294676 TSC_hg19_v1_chr19_+_10654589	2286	+	TSC_hg19_v1_chr19_+_10654592 AK056210 AK314712 AK316454 BC068992 AK223383 BC007639 NM_032885 AJ312332 CU686689	2384	+	BC009303 TSC_hg19_v1_chr19_-_10676685 AL833189 AK300780	24372	-	AK074661|S1PR5|53637|sphingosine-1-phosphate receptor 5##NM_001166215|S1PR5|53637|sphingosine-1-phosphate receptor 5##BC034703|S1PR5|53637|sphingosine-1-phosphate receptor 5##AK094880|S1PR5|53637|sphingosine-1-phosphate receptor 5##BC067781|S1PR5|53637|sphingosine-1-phosphate receptor 5##NM_030760|S1PR5|53637|sphingosine-1-phosphate receptor 5##DQ891290|S1PR5|53637|sphingosine-1-phosphate receptor 5##DQ893341|S1PR5|53637|sphingosine-1-phosphate receptor 5##DQ894474|S1PR5|53637|sphingosine-1-phosphate receptor 5##DQ896661|S1PR5|53637|sphingosine-1-phosphate receptor 5##AF331840|S1PR5|53637|sphingosine-1-phosphate receptor 5##AF331841|S1PR5|53637|sphingosine-1-phosphate receptor 5##AF331842|S1PR5|53637|sphingosine-1-phosphate receptor 5##AK294676|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##BC009303|KRI1|65095|KRI1 homolog (S. cerevisiae)##AL833189|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK300780|KRI1|65095|KRI1 homolog (S. cerevisiae)	0.968716	CTCF.p2:-10:0.969
chr20	8286200	8286345	reg1013308.p1	10.259	+	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	-173242	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-285800	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-285865	-	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	763411	+	AK307482 TSC_hg19_v1_chr20_+_9049806	763526	+	NM_182797 BC117458 BC143868	911786	+	AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4	1.028143	CTCF.p2:10:0.999
chr3	169386964	169387112	reg1011141.p1	10.259	+	BC069498 GQ352634 U43292 AK304098 NM_001205194 NM_004991	-5549	-	BX640908 NM_001164000	-521517	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	-522676	-	BC128029 TSC_hg19_v1_chr3_-_169482848	95810	-	BC007289 AK055346 NM_032487	100604	-	TSC_hg19_v1_chr3_+_169490577 AK092022	103558	+	BC069498|MECOM|2122|MDS1 and EVI1 complex locus##GQ352634|MECOM|2122|MDS1 and EVI1 complex locus##U43292|MECOM|2122|MDS1 and EVI1 complex locus##AK304098|MECOM|2122|MDS1 and EVI1 complex locus##NM_001205194|MECOM|2122|MDS1 and EVI1 complex locus##NM_004991|MECOM|2122|MDS1 and EVI1 complex locus##BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BC128029|TERC|7012|telomerase RNA component##BC007289|ARPM1|84517|actin related protein M1##AK055346|ARPM1|84517|actin related protein M1##NM_032487|ARPM1|84517|actin related protein M1##AK092022|MYNN|55892|myoneurin	0.061622	
chr17	33416447	33416551	reg1010756.p1	10.258	+	TSC_hg19_v1_chr17_-_33416298 AK093112 AX747930 BC028424	-188	-	TSC_hg19_v1_chr17_-_33390690 CR933651 NM_001017368	-25782	-	TSC_hg19_v1_chr17_+_33307530 NM_002311 NM_013975 BC068005 AK300363 AK308407 U40671 X84740 BC009026	-108911	+	AB464124 DQ892318 DQ895520 BC002723 AB013341 AB016223 AB016224 AB016225 Y15572 AF034956 BC014422 TSC_hg19_v1_chr17_-_33446836 AK296241 BX647297 AK301249	30246	-	TSC_hg19_v1_chr17_-_33446880 NM_001142571 NM_002878 NM_133629	30376	-	AK313775 NM_017559 BC024002 AK225743 AL133054 EU831600 EU831687	32155	+	AK093112|RFFL|117584|ring finger and FYVE-like domain containing 1##BC028424|RFFL|117584|ring finger and FYVE-like domain containing 1##CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1##NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1##NM_002311|LIG3|3980|ligase III, DNA, ATP-dependent##NM_013975|LIG3|3980|ligase III, DNA, ATP-dependent##BC068005|LIG3|3980|ligase III, DNA, ATP-dependent##AK300363|LIG3|3980|ligase III, DNA, ATP-dependent##AK308407|LIG3|3980|ligase III, DNA, ATP-dependent##U40671|LIG3|3980|ligase III, DNA, ATP-dependent##X84740|LIG3|3980|ligase III, DNA, ATP-dependent##BC009026|LIG3|3980|ligase III, DNA, ATP-dependent##DQ892318|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##DQ895520|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC002723|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB013341|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016223|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016224|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016225|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##Y15572|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AF034956|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC014422|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK296241|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BX647297|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK301249|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_001142571|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_002878|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_133629|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK313775|FNDC8|54752|fibronectin type III domain containing 8##NM_017559|FNDC8|54752|fibronectin type III domain containing 8##BC024002|FNDC8|54752|fibronectin type III domain containing 8##AK225743|FNDC8|54752|fibronectin type III domain containing 8##AL133054|FNDC8|54752|fibronectin type III domain containing 8##EU831600|FNDC8|54752|fibronectin type III domain containing 8##EU831687|FNDC8|54752|fibronectin type III domain containing 8	0.900121	CTCF.p2:-13:0.900
chr1	76098171	76098288	reg1013122.p1	10.258	+	AK299573 TSC_hg19_v1_chr1_-_76081791	-16483	-	AK128063 BC028743 BC034580 BC051740 NM_001130058 NM_152697 AK093170 AX747970	-21448	-	NM_001001933 BC040321	-504110	+	NM_000016 NM_001127328 TSC_hg19_v1_chr1_+_76190106	91845	+	TSC_hg19_v1_chr1_+_76190393 AK309843 AK311185 AK301039 AK315946 BX647734 BC005377 AK301717	92176	+	AK312629 TSC_hg19_v1_chr1_+_76190445 AK296045 AK311022 M16827 AF251043 DQ892341 DQ895710 CU675151	92227	+	AK299573|SLC44A5|204962|solute carrier family 44, member 5##AK128063|SLC44A5|204962|solute carrier family 44, member 5##BC028743|SLC44A5|204962|solute carrier family 44, member 5##BC034580|SLC44A5|204962|solute carrier family 44, member 5##BC051740|SLC44A5|204962|solute carrier family 44, member 5##NM_001130058|SLC44A5|204962|solute carrier family 44, member 5##NM_152697|SLC44A5|204962|solute carrier family 44, member 5##AK093170|SLC44A5|204962|solute carrier family 44, member 5##NM_001001933|LHX8|431707|LIM homeobox 8##BC040321|LHX8|431707|LIM homeobox 8##NM_000016|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##NM_001127328|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AK309843|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AK311185|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AK301039|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AK315946|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##BX647734|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##BC005377|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AK301717|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AK312629|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AK296045|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AK311022|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##M16827|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AF251043|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##DQ892341|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##DQ895710|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain	0.469357	CTCF.p2:1:0.469
chr17	70553208	70553340	reg1013401.p1	10.258	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-436034	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-436104	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-436115	+	AK000477 TSC_hg19_v1_chr17_-_70588944	35669	-	AF331643 TSC_hg19_v1_chr17_-_71088816	535542	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	535549	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.960562	CTCF.p2:-19:0.961
chr22	44477179	44477292	reg1009632.p1	10.258	+	BC039811 NM_001243385	-12239	+	AK308443 NM_001243386	-55052	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	-57036	+	NM_001137605 AK309348 AK293360	91621	+	NM_022141 AK225929 AK307294 BC034406 AF237772	99577	+	AK307299 TSC_hg19_v1_chr22_+_44577227 AK311264	99989	+	BC039811|PARVB|29780|parvin, beta##NM_001243385|PARVB|29780|parvin, beta##AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##NM_001137605|PARVG|64098|parvin, gamma##AK309348|PARVG|64098|parvin, gamma##AK293360|PARVG|64098|parvin, gamma##NM_022141|PARVG|64098|parvin, gamma##AK225929|PARVG|64098|parvin, gamma##AK307294|PARVG|64098|parvin, gamma##BC034406|PARVG|64098|parvin, gamma##AF237772|PARVG|64098|parvin, gamma##AK307299|PARVG|64098|parvin, gamma	0.993098	CTCF.p2:18:0.993
chr6	76644765	76644904	reg1012363.p1	10.258	+	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-185825	+	TSC_hg19_v1_chr6_+_76458926 NM_004999 BX647397 BC012598	-185918	+	AF307849 AB018340 TSC_hg19_v1_chr6_+_76312226 AF306508 AF196304	-332626	+	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	137465	-	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	1528315	-	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	2932421	+	AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_004999|MYO6|4646|myosin VI##BX647397|MYO6|4646|myosin VI##BC012598|MYO6|4646|myosin VI##AF307849|SENP6|26054|SUMO1/sentrin specific peptidase 6##AB018340|SENP6|26054|SUMO1/sentrin specific peptidase 6##AF306508|SENP6|26054|SUMO1/sentrin specific peptidase 6##AF196304|SENP6|26054|SUMO1/sentrin specific peptidase 6##HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1	0.496115	CTCF.p2:-22:0.496
chr8	38268266	38268381	reg1007400.p1	10.258	+	BC024250 NM_001199660	-23676	+	NM_001199659 NM_144652 TSC_hg19_v1_chr8_+_38244011 AK289944 AK058138 AK302317 BC069830 AL832241 AY173945 AK302474	-24313	+	TSC_hg19_v1_chr8_-_38239790 AF332468 AF332469 NM_017778 NM_023034 BC000030	-28527	-	AK291754 AK309947 AK292470 NM_001174065 NM_001174066 NM_001174067	56978	-	X51803 X57119 X57120 X57121 X57122 M37722 M34185 TSC_hg19_v1_chr8_-_38325674	57284	-	M34187 M34188 M34186 TSC_hg19_v1_chr8_-_38326072	57625	-	BC024250|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##NM_001199660|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##NM_001199659|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##NM_144652|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK289944|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK058138|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK302317|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##BC069830|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AL832241|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AY173945|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK302474|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AF332468|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##AF332469|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##NM_017778|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##NM_023034|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##BC000030|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##AK291754|FGFR1|2260|fibroblast growth factor receptor 1##AK309947|FGFR1|2260|fibroblast growth factor receptor 1##AK292470|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1##X51803|FGFR1|2260|fibroblast growth factor receptor 1##X57119|FGFR1|2260|fibroblast growth factor receptor 1##X57120|FGFR1|2260|fibroblast growth factor receptor 1##X57121|FGFR1|2260|fibroblast growth factor receptor 1##X57122|FGFR1|2260|fibroblast growth factor receptor 1##M37722|FGFR1|2260|fibroblast growth factor receptor 1##M34185|FGFR1|2260|fibroblast growth factor receptor 1##M34187|FGFR1|2260|fibroblast growth factor receptor 1##M34188|FGFR1|2260|fibroblast growth factor receptor 1##M34186|FGFR1|2260|fibroblast growth factor receptor 1	0.605501	CTCF.p2:8:0.606
chr1	151665674	151665804	reg1011593.p1	10.257	+	BC107862 TSC_hg19_v1_chr1_+_151630762	-35003	+	AY044866 TSC_hg19_v1_chr1_+_151611385	-54379	+	TSC_hg19_v1_chr1_+_151584672 AB007957	-81041	+	AB209264 NM_001172648 NM_001172649	23097	-	BC004145 TSC_hg19_v1_chr1_-_151689279 BC052491 AK299681 AY165003 NM_007185	23530	-	NM_001144956	28273	+	BC107862|SNX27|81609|sorting nexin family member 27##AY044866|SNX27|81609|sorting nexin family member 27##AB007957|SNX27|81609|sorting nexin family member 27##AB209264|CELF3|11189|CUGBP, Elav-like family member 3##NM_001172648|CELF3|11189|CUGBP, Elav-like family member 3##NM_001172649|CELF3|11189|CUGBP, Elav-like family member 3##BC004145|CELF3|11189|CUGBP, Elav-like family member 3##BC052491|CELF3|11189|CUGBP, Elav-like family member 3##AY165003|CELF3|11189|CUGBP, Elav-like family member 3##NM_007185|CELF3|11189|CUGBP, Elav-like family member 3##NM_001144956|RIIAD1|284485|regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1	0.747878	CTCF.p2:-10:0.748
chr20	38514797	38514921	reg1011017.p1	10.257	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-923870	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-959791	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-959870	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	803018	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1142635	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1142805	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.981079	CTCF.p2:0:0.981
chr10	48038934	48039049	reg1012536.p1	10.256	+	NM_018232	-144969	+	NM_001630 BC008813 BC073755 AK096715 AK313626 X16662 BC029890 AK300191 AK223149 AK307182 CU679125 CU687256	-291976	+	BC171820 BC171845 BC171847 NM_001190810	-825366	-	BC171820 BC171845 BC171847 NM_001190810	176732	+	BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556 BC146955 BC146968	208673	+	AK298761 NM_001040084 BC073755 AK096715 Z36830 AK296976 BC004376 NM_001098845 X16662 BC029890 AK300158 AK223149 AK296573 AK300139 M81844 AB590156 CU687256 DQ893430 DQ896775	216334	+	NM_018232|FAM21B|55747|family with sequence similarity 21, member B##NM_001630|ANXA8L2|244|annexin A8-like 2##BC008813|ANXA8L2|244|annexin A8-like 2##BC073755|ANXA8|653145|annexin A8##AK313626|ANXA8L2|244|annexin A8-like 2##X16662|ANXA8L2|244|annexin A8-like 2##AK300191|ANXA8L2|244|annexin A8-like 2##AK223149|ANXA8L2|244|annexin A8-like 2##BC171845|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171847|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##NM_001190810|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171845|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171847|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##NM_001190810|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##AK298761|ANXA8|653145|annexin A8##NM_001040084|ANXA8|653145|annexin A8##BC073755|ANXA8|653145|annexin A8##Z36830|ANXA8|653145|annexin A8##BC004376|ANXA8|653145|annexin A8##NM_001098845|ANXA8L1|728113|annexin A8-like 1##X16662|ANXA8L2|244|annexin A8-like 2##AK300158|ANXA8|653145|annexin A8##AK223149|ANXA8L2|244|annexin A8-like 2##AK296573|ANXA8|653145|annexin A8##AK300139|ANXA8|653145|annexin A8##M81844|ANXA8|653145|annexin A8##DQ893430|ANXA8L2|244|annexin A8-like 2##DQ896775|ANXA8|653145|annexin A8	0.862775	CTCF.p2:-2:0.863
chr5	137469251	137469372	reg1011233.p2	10.256	+	BC144497 AY009402 BC144001 AB057725 NM_058244 AB590697	-49632	+	TSC_hg19_v1_chr5_-_137368794 NM_001101800 NM_001101801 NM_016603	-100521	-	TSC_hg19_v1_chr5_-_137368776 AK314224	-100535	-	U90450 AK312181 AF067724 BC026182 NM_003551	5792	-	BC008039 BC008076 AB384833 AB209079 TSC_hg19_v1_chr5_-_137514319 AK310380 AK289951 AK293621 AK297756 AK299694 AK312333 AK225928 AL136823 NM_001164326 NM_006696 NM_139199	45022	-	NM_005733	45105	+	BC144497|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AY009402|WNT8A|7478|wingless-type MMTV integration site family, member 8A##BC144001|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AB057725|WNT8A|7478|wingless-type MMTV integration site family, member 8A##NM_058244|WNT8A|7478|wingless-type MMTV integration site family, member 8A##NM_001101800|FAM13B|51306|family with sequence similarity 13, member B##NM_001101801|FAM13B|51306|family with sequence similarity 13, member B##NM_016603|FAM13B|51306|family with sequence similarity 13, member B##AK314224|FAM13B|51306|family with sequence similarity 13, member B##U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC008039|BRD8|10902|bromodomain containing 8##BC008076|BRD8|10902|bromodomain containing 8##AB209079|BRD8|10902|bromodomain containing 8##AK310380|BRD8|10902|bromodomain containing 8##AK289951|BRD8|10902|bromodomain containing 8##AK293621|BRD8|10902|bromodomain containing 8##AK297756|BRD8|10902|bromodomain containing 8##AK312333|BRD8|10902|bromodomain containing 8##AK225928|BRD8|10902|bromodomain containing 8##AL136823|BRD8|10902|bromodomain containing 8##NM_001164326|BRD8|10902|bromodomain containing 8##NM_006696|BRD8|10902|bromodomain containing 8##NM_139199|BRD8|10902|bromodomain containing 8##NM_005733|KIF20A|10112|kinesin family member 20A	0.77533	CTCF.p2:13:0.775
chr1	45251889	45251996	reg1010513.p1	10.255	+	AK311854 D28361 NM_001012 BC022070 BC070875	-10691	+	TSC_hg19_v1_chr1_+_45205568 AK290688 AB590244 BT006759 CR450302 CU677119 CU679091 DQ893800 EU176178	-46361	+	AK124208 AK300756 AK312606 TSC_hg19_v1_chr1_+_45205533 BC008764 U63743 BC014924	-46400	+	AF440757 AY515707 BC101823 NM_153274	1458	-	AJ293866 TSC_hg19_v1_chr1_+_45266017	14014	+	BC013899 NM_004073 TSC_hg19_v1_chr1_+_45266045	14099	+	AK311854|RPS8|6202|ribosomal protein S8##NM_001012|RPS8|6202|ribosomal protein S8##BC022070|RPS8|6202|ribosomal protein S8##BC070875|RPS8|6202|ribosomal protein S8##AK290688|KIF2C|11004|kinesin family member 2C##BT006759|KIF2C|11004|kinesin family member 2C##CR450302|KIF2C|11004|kinesin family member 2C##DQ893800|KIF2C|11004|kinesin family member 2C##EU176178|KIF2C|11004|kinesin family member 2C##AK300756|KIF2C|11004|kinesin family member 2C##AK312606|KIF2C|11004|kinesin family member 2C##BC008764|KIF2C|11004|kinesin family member 2C##U63743|KIF2C|11004|kinesin family member 2C##BC014924|KIF2C|11004|kinesin family member 2C##AF440757|BEST4|266675|bestrophin 4##AY515707|BEST4|266675|bestrophin 4##BC101823|BEST4|266675|bestrophin 4##NM_153274|BEST4|266675|bestrophin 4##AJ293866|PLK3|1263|polo-like kinase 3##BC013899|PLK3|1263|polo-like kinase 3##NM_004073|PLK3|1263|polo-like kinase 3	0.022393	
chr7	23317135	23317254	reg1012157.p1	10.255	+	AF322909 TSC_hg19_v1_chr7_+_23286426 BC025297 BC011595 CU679974 CU689536 AB528457 DQ892084 DQ895277 BT007074	-30746	+	TSC_hg19_v1_chr7_+_23286407 AJ505015	-30789	+	TSC_hg19_v1_chr7_+_23286393 AK292078 AK296779 AK297031 AK297803 AY359124 BC032783	-30800	+	TSC_hg19_v1_chr7_+_23338957 BC012331 NM_138446 AK127742 AK316559	21771	+	TSC_hg19_v1_chr7_-_23509637 AB529064 CU688032	192485	-	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	192804	-	AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb##BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb##BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb##BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb##AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb##AK292078|GPNMB|10457|glycoprotein (transmembrane) nmb##AK296779|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297031|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297803|GPNMB|10457|glycoprotein (transmembrane) nmb##AY359124|GPNMB|10457|glycoprotein (transmembrane) nmb##BC032783|GPNMB|10457|glycoprotein (transmembrane) nmb##BC012331|C7orf30|115416|chromosome 7 open reading frame 30##NM_138446|C7orf30|115416|chromosome 7 open reading frame 30##AK127742|C7orf30|115416|chromosome 7 open reading frame 30##AK316559|C7orf30|115416|chromosome 7 open reading frame 30##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	0.232385	CTCF.p2:-2:0.232
chr15	76483220	76483341	reg1011195.p1	10.254	+	TSC_hg19_v1_chr15_+_76352323 AK056777 AK308676	-130951	+	TSC_hg19_v1_chr15_+_76352281 AK095509 NM_152335	-130991	+	AK311204 TSC_hg19_v1_chr15_-_76352131	-131178	-	BT009796 J04058 TSC_hg19_v1_chr15_-_76603737 AB529049 BC095457	120452	-	TSC_hg19_v1_chr15_-_76603771 AK300044 BC015526 D28380	120485	-	TSC_hg19_v1_chr15_-_76603791 BC029995	120517	-	AK308676|C15orf27|123591|chromosome 15 open reading frame 27##AK095509|C15orf27|123591|chromosome 15 open reading frame 27##NM_152335|C15orf27|123591|chromosome 15 open reading frame 27##AK311204|NRG4|145957|neuregulin 4##BT009796|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##J04058|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC095457|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##AK300044|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC015526|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC029995|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide	0.968896	CTCF.p2:-4:0.969
chr9	18442745	18442878	reg1011812.p1	10.254	+	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	-863715	+	TSC_hg19_v1_chr9_+_17134988 AK303973 AK308837 BX647069 AK098502 NM_001114395 NM_017738	-1307794	+	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	-1572045	-	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	31277	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	31372	+	BC033489 AK292245 AK057474 NM_153707	590408	-	AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##AK303973|CNTLN|54875|centlein, centrosomal protein##AK308837|CNTLN|54875|centlein, centrosomal protein##BX647069|CNTLN|54875|centlein, centrosomal protein##AK098502|CNTLN|54875|centlein, centrosomal protein##NM_001114395|CNTLN|54875|centlein, centrosomal protein##NM_017738|CNTLN|54875|centlein, centrosomal protein##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1##BC033489|FAM154A|158297|family with sequence similarity 154, member A##AK292245|FAM154A|158297|family with sequence similarity 154, member A##AK057474|FAM154A|158297|family with sequence similarity 154, member A##NM_153707|FAM154A|158297|family with sequence similarity 154, member A	0.998492	CTCF.p2:0:0.998
chr4	55100534	55100666	reg1010312.p1	10.253	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-5136	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-5320	+	AB028838 EU596451 NM_133267	-134378	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	423534	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	891154	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	1111816	+	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB028838|GSX2|170825|GS homeobox 2##EU596451|GSX2|170825|GS homeobox 2##NM_133267|GSX2|170825|GS homeobox 2##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3	0.999888	CTCF.p2:-1:1.000
chr11	43589079	43589191	reg1012492.p1	10.252	+	TSC_hg19_v1_chr11_+_43380492 AK001752 BC017238 BC033000	-208643	+	TSC_hg19_v1_chr11_+_43380403 NM_018259	-208717	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	-255495	+	TSC_hg19_v1_chr11_+_43665785 AK095484	76649	+	NM_016142 TSC_hg19_v1_chr11_+_43702287 AK027882 AK075011 AK292625 AK075216 AK074952 AF078850 BC012043 AK222881 AK301663 BC012536 EU176708	113123	+	TSC_hg19_v1_chr11_+_43902380 NM_139178 AK315266 AB042029 BC067257	313258	+	AK001752|TTC17|55761|tetratricopeptide repeat domain 17##BC017238|TTC17|55761|tetratricopeptide repeat domain 17##BC033000|TTC17|55761|tetratricopeptide repeat domain 17##NM_018259|TTC17|55761|tetratricopeptide repeat domain 17##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5##NM_016142|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK027882|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075011|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK292625|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075216|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK074952|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AF078850|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012043|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK222881|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK301663|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012536|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##EU176708|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##NM_139178|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AK315266|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AB042029|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##BC067257|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)	0.943568	CTCF.p2:-3:0.944
chr19	36618721	36618867	reg1009828.p1	10.252	+	TSC_hg19_v1_chr19_+_36606369 D49738 BC052812 AF013488 BC005969 BT007424 DQ892900 DQ896150	-12395	+	TSC_hg19_v1_chr19_-_36605794 DQ893214 DQ896543 AB464045 BC017860 AK312206 BC017112 NM_006233 BC067794	-12809	-	NM_001281	-12907	+	TSC_hg19_v1_chr19_+_36630967 AK289606 X04106 NM_001003962 NM_001749 BC018931	12128	+	BC007779 TSC_hg19_v1_chr19_+_36630999	12205	+	TSC_hg19_v1_chr19_+_36631021 BC000592 BC011903 BC064998 BC017308 AY007141 BC023643 BC021933	12239	+	D49738|TBCB|1155|tubulin folding cofactor B##BC052812|TBCB|1155|tubulin folding cofactor B##AF013488|TBCB|1155|tubulin folding cofactor B##BC005969|TBCB|1155|tubulin folding cofactor B##BT007424|TBCB|1155|tubulin folding cofactor B##DQ892900|TBCB|1155|tubulin folding cofactor B##DQ896150|TBCB|1155|tubulin folding cofactor B##DQ893214|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##DQ896543|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##BC017860|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##AK312206|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##BC017112|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##NM_006233|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##BC067794|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##NM_001281|TBCB|1155|tubulin folding cofactor B##AK289606|CAPNS1|826|calpain, small subunit 1##X04106|CAPNS1|826|calpain, small subunit 1##NM_001003962|CAPNS1|826|calpain, small subunit 1##NM_001749|CAPNS1|826|calpain, small subunit 1##BC018931|CAPNS1|826|calpain, small subunit 1##BC007779|CAPNS1|826|calpain, small subunit 1##BC000592|CAPNS1|826|calpain, small subunit 1##BC011903|CAPNS1|826|calpain, small subunit 1##BC064998|CAPNS1|826|calpain, small subunit 1##BC017308|CAPNS1|826|calpain, small subunit 1##AY007141|CAPNS1|826|calpain, small subunit 1##BC023643|CAPNS1|826|calpain, small subunit 1##BC021933|CAPNS1|826|calpain, small subunit 1	0.997342	CTCF.p2:-2:0.997
chr2	23683226	23683366	reg1011341.p1	10.252	+	NM_052920	-74999	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2416367	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-2416397	-	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	466650	-	TSC_hg19_v1_chr2_+_24150144 BC037901	466861	+	TSC_hg19_v1_chr2_+_24163332 BC092484 AL832079 NM_181713 BC111997 BC093681 BC143298	480075	+	NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A##BC092484|UBXN2A|165324|UBX domain protein 2A##AL832079|UBXN2A|165324|UBX domain protein 2A##NM_181713|UBXN2A|165324|UBX domain protein 2A##BC111997|UBXN2A|165324|UBX domain protein 2A##BC093681|UBXN2A|165324|UBX domain protein 2A##BC143298|UBXN2A|165324|UBX domain protein 2A	0.676756	CTCF.p2:20:0.677
chrX	138641928	138642079	reg1013323.p1	10.252	+	BC109214 BC109215 NM_000133 TSC_hg19_v1_chrX_+_138612919 J00137 AB186358 AK292749 FR846238 FR846239 FR846240 J00136 M11309	-29093	+	TSC_hg19_v1_chrX_-_138287186 AK303685 NM_001139498 NM_001139500 NM_001139501 AK297545	-354806	-	AF199613 TSC_hg19_v1_chrX_-_138287166	-354844	-	X12556 AK313900 AK296488 NM_001171877 NM_001171878 NM_001171879 NM_005369	82922	-	AK302957 AK316416 NM_001099855 NM_001171876	148351	-	BC132728 BC132730 AJ580093 AJ580094 NM_001010986 NM_173694	272412	-	BC109214|F9|2158|coagulation factor IX##BC109215|F9|2158|coagulation factor IX##NM_000133|F9|2158|coagulation factor IX##J00137|F9|2158|coagulation factor IX##AB186358|F9|2158|coagulation factor IX##AK292749|F9|2158|coagulation factor IX##FR846238|F9|2158|coagulation factor IX##FR846239|F9|2158|coagulation factor IX##FR846240|F9|2158|coagulation factor IX##J00136|F9|2158|coagulation factor IX##M11309|F9|2158|coagulation factor IX##AK303685|FGF13|2258|fibroblast growth factor 13##NM_001139498|FGF13|2258|fibroblast growth factor 13##NM_001139500|FGF13|2258|fibroblast growth factor 13##NM_001139501|FGF13|2258|fibroblast growth factor 13##AK297545|FGF13|2258|fibroblast growth factor 13##AF199613|FGF13|2258|fibroblast growth factor 13##X12556|MCF2|4168|MCF.2 cell line derived transforming sequence##AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence##AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence##AK302957|MCF2|4168|MCF.2 cell line derived transforming sequence##AK316416|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001099855|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171876|MCF2|4168|MCF.2 cell line derived transforming sequence##BC132728|ATP11C|286410|ATPase, class VI, type 11C##BC132730|ATP11C|286410|ATPase, class VI, type 11C##AJ580093|ATP11C|286410|ATPase, class VI, type 11C##AJ580094|ATP11C|286410|ATPase, class VI, type 11C##NM_001010986|ATP11C|286410|ATPase, class VI, type 11C##NM_173694|ATP11C|286410|ATPase, class VI, type 11C	0.981554	CTCF.p2:0:0.982
chr10	5325586	5325700	reg1011986.p1	10.251	+	AK314988 BC020744 NM_001818 TSC_hg19_v1_chr10_+_5238799 S68287 AB031085 AB045829 CU676682 DQ891424 DQ894598 M33375 D26125	-86848	+	BC019230 TSC_hg19_v1_chr10_+_5136613 S68288 AF149416 AM392923 BT007286 CU674730 CU676394 DQ890679 DQ893860 GQ129450 GQ129451	-189010	+	TSC_hg19_v1_chr10_+_5136605 AB018580 AK296701 AK290365 AK315411 AK310940	-189044	+	NM_053049 BC100867 BC100868 BC100869 BC100870	81371	+	TSC_hg19_v1_chr10_-_5446792 BC098247 BC099716 BC105634 AK296616 AK025318 NM_001171864 NM_024803	121145	-	TSC_hg19_v1_chr10_+_5454547 NM_001047160 AK299335 BC053553 S82401 AB587387 CU690984	128942	+	AK314988|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##BC020744|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##NM_001818|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##S68287|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##AB031085|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##AB045829|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##DQ891424|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##DQ894598|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##M33375|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##D26125|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##BC019230|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68288|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AF149416|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AM392923|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##BT007286|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##DQ890679|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##DQ893860|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##GQ129450|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##GQ129451|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AB018580|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK290365|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK315411|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK310940|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##NM_053049|UCN3|114131|urocortin 3 (stresscopin)##BC100867|UCN3|114131|urocortin 3 (stresscopin)##BC100868|UCN3|114131|urocortin 3 (stresscopin)##BC100869|UCN3|114131|urocortin 3 (stresscopin)##BC100870|UCN3|114131|urocortin 3 (stresscopin)##BC098247|TUBAL3|79861|tubulin, alpha-like 3##BC099716|TUBAL3|79861|tubulin, alpha-like 3##BC105634|TUBAL3|79861|tubulin, alpha-like 3##AK296616|TUBAL3|79861|tubulin, alpha-like 3##AK025318|TUBAL3|79861|tubulin, alpha-like 3##NM_001171864|TUBAL3|79861|tubulin, alpha-like 3##NM_024803|TUBAL3|79861|tubulin, alpha-like 3##NM_001047160|NET1|10276|neuroepithelial cell transforming 1##AK299335|NET1|10276|neuroepithelial cell transforming 1##BC053553|NET1|10276|neuroepithelial cell transforming 1##S82401|NET1|10276|neuroepithelial cell transforming 1	0.994452	CTCF.p2:8:0.994
chr6	33668338	33668458	reg1011731.p1	10.251	+	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	-79204	+	TSC_hg19_v1_chr6_-_33548037 AK303422 AK293547 NM_001188	-120355	-	U23765 U16811 TSC_hg19_v1_chr6_-_33547998 X84213 BC004431 BC032789 BC110337 AK091807 AK292093	-120483	-	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	11065	-	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	11115	-	AK056586 AK223572 AK289935 BC089389 NM_001142883 NM_054111	46323	-	D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##AK303422|BAK1|578|BCL2-antagonist/killer 1##AK293547|BAK1|578|BCL2-antagonist/killer 1##NM_001188|BAK1|578|BCL2-antagonist/killer 1##U23765|BAK1|578|BCL2-antagonist/killer 1##U16811|BAK1|578|BCL2-antagonist/killer 1##X84213|BAK1|578|BCL2-antagonist/killer 1##BC004431|BAK1|578|BCL2-antagonist/killer 1##BC032789|BAK1|578|BCL2-antagonist/killer 1##BC110337|BAK1|578|BCL2-antagonist/killer 1##AK091807|BAK1|578|BCL2-antagonist/killer 1##AK292093|BAK1|578|BCL2-antagonist/killer 1##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125##AK056586|IP6K3|117283|inositol hexakisphosphate kinase 3##AK223572|IP6K3|117283|inositol hexakisphosphate kinase 3##AK289935|IP6K3|117283|inositol hexakisphosphate kinase 3##BC089389|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_001142883|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_054111|IP6K3|117283|inositol hexakisphosphate kinase 3	0.978272	CTCF.p2:27:0.965
chr10	88963321	88963455	reg1012670.p1	10.250	+	TSC_hg19_v1_chr10_+_88854962 AK022978 NM_019054	-108455	+	TSC_hg19_v1_chr10_-_88854695 NM_005271	-108628	-	AK311722 TSC_hg19_v1_chr10_-_88854647 AK297456	-108735	-	BC092519 NM_001099338 AB095940	21842	+	TSC_hg19_v1_chr10_-_89102098 AK091716	138708	-	TSC_hg19_v1_chr10_-_89102128 AK309777 AK311174	138753	-	AK022978|FAM35A|54537|family with sequence similarity 35, member A##NM_019054|FAM35A|54537|family with sequence similarity 35, member A##NM_005271|GLUD1|2746|glutamate dehydrogenase 1##AK311722|GLUD1|2746|glutamate dehydrogenase 1##AK297456|GLUD1|2746|glutamate dehydrogenase 1##BC092519|FAM22A|728118|family with sequence similarity 22, member A##NM_001099338|FAM22A|728118|family with sequence similarity 22, member A##AB095940|FAM22D|728130|family with sequence similarity 22, member D##AK309777|LOC728190|728190|uncharacterized LOC728190##AK311174|LOC728190|728190|uncharacterized LOC728190	0.989336	CTCF.p2:12:0.989
chr11	121120024	121120129	reg1011815.p1	10.250	+	NM_005422	-146702	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	-225266	+	AB384776 NM_014619 S67803	-589049	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	43329	+	TSC_hg19_v1_chr11_+_121163484 AK096847 AK223141 AK222686	43406	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	43478	+	NM_005422|TECTA|7007|tectorin alpha##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK096847|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK223141|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK222686|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.484824	CTCF.p2:10:0.485
chr1	11705862	11705979	reg1011880.p1	10.250	+	TSC_hg19_v1_chr1_+_11539211 AB593117 AK311332 AB037758 NM_020780	-166685	+	TSC_hg19_v1_chr1_+_11333566 BC004468 BT006832	-372375	+	TSC_hg19_v1_chr1_+_11333254 AK222808 NM_013319 AK074890 AF117064	-372604	+	AB463629 CR542110 CU692940 DQ892848 DQ892849 DQ896095 TSC_hg19_v1_chr1_-_11714417	8486	-	AK055344 NM_183412	8511	+	BC025233 TSC_hg19_v1_chr1_-_11714487 AK313019 BC096747 BC014957	8568	-	AB593117|PTCHD2|57540|patched domain containing 2##AB037758|PTCHD2|57540|patched domain containing 2##NM_020780|PTCHD2|57540|patched domain containing 2##BC004468|UBIAD1|29914|UbiA prenyltransferase domain containing 1##BT006832|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK222808|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_013319|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK074890|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AF117064|UBIAD1|29914|UbiA prenyltransferase domain containing 1##CR542110|FBXO2|26232|F-box protein 2##DQ892848|FBXO2|26232|F-box protein 2##DQ892849|FBXO2|26232|F-box protein 2##DQ896095|FBXO2|26232|F-box protein 2##AK055344|FBXO44|93611|F-box protein 44##NM_183412|FBXO44|93611|F-box protein 44##BC025233|FBXO2|26232|F-box protein 2##AK313019|FBXO2|26232|F-box protein 2##BC096747|FBXO2|26232|F-box protein 2##BC014957|FBXO2|26232|F-box protein 2	0.999484	CTCF.p2:-1:0.999
chr11	65361364	65361500	reg1011936.p1	10.250	+	TSC_hg19_v1_chr11_+_65343506 NM_001099409	-17929	+	BC032373 NM_001098784 NM_001098785 NM_152832 AF052151 TSC_hg19_v1_chr11_+_65340004	-21501	+	TSC_hg19_v1_chr11_+_65337947 AB001740 NM_006396 BC014791 DQ891782 DQ894966	-23490	+	AF110522 AF110523 AF110524 NM_005714 NM_033347 NM_033348 NM_033455	2034	-	TSC_hg19_v1_chr11_-_65381690 U07747 BC064543 AK315557 AB209655 BC011263 L32976 AK222781 NM_002419	20261	-	TSC_hg19_v1_chr11_-_65381782 AK310986	20376	-	NM_001099409|EHBP1L1|254102|EH domain binding protein 1-like 1##BC032373|FAM89B|23625|family with sequence similarity 89, member B##NM_001098784|FAM89B|23625|family with sequence similarity 89, member B##NM_001098785|FAM89B|23625|family with sequence similarity 89, member B##NM_152832|FAM89B|23625|family with sequence similarity 89, member B##AF052151|FAM89B|23625|family with sequence similarity 89, member B##AB001740|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##NM_006396|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##BC014791|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##DQ891782|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##DQ894966|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##AF110522|KCNK7|10089|potassium channel, subfamily K, member 7##AF110523|KCNK7|10089|potassium channel, subfamily K, member 7##AF110524|KCNK7|10089|potassium channel, subfamily K, member 7##NM_005714|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033347|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033348|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033455|KCNK7|10089|potassium channel, subfamily K, member 7##U07747|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##BC064543|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##AK315557|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##AB209655|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##BC011263|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##L32976|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##AK222781|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##NM_002419|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11	0.999594	CTCF.p2:12:1.000
chr1	20703519	20703615	reg1010631.p1	10.250	+	NM_001039500 AK125833	-86147	+	BC047428 NM_152376 BX648631 AK058158 TSC_hg19_v1_chr1_+_20512591	-190983	+	NM_001105572	-201881	-	AY204901 TSC_hg19_v1_chr1_-_20812323	108731	-	NM_018584 TSC_hg19_v1_chr1_-_20812743	109214	-	EU935008 AB528298 AM393331 AM393690 TSC_hg19_v1_chr1_-_20834605 BC014010 BC010101	130993	-	NM_001039500|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AK125833|VWA5B1|127731|von Willebrand factor A domain containing 5B1##BC047428|UBXN10|127733|UBX domain protein 10##NM_152376|UBXN10|127733|UBX domain protein 10##BX648631|UBXN10|127733|UBX domain protein 10##AK058158|UBXN10|127733|UBX domain protein 10##NM_001105572|PLA2G2C|391013|phospholipase A2, group IIC##AY204901|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##NM_018584|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##EU935008|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AM393331|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AM393690|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC014010|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC010101|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1	0.333251	CTCF.p2:6:0.333
chr1	39657383	39657493	reg1010385.p1	10.250	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-110350	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	-165430	+	TSC_hg19_v1_chr1_+_39456956 NM_001136275 NM_024595 AK022728 AK092624 AX747634 AK124799 AK126262 AK223276 AK298890 AK303098 BC001498 BC119745 BC119746 AY326465	-200376	+	NM_015038	217737	+	TSC_hg19_v1_chr1_+_39922264 AK023821	264881	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	299907	+	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_001136275|AKIRIN1|79647|akirin 1##NM_024595|AKIRIN1|79647|akirin 1##AK022728|AKIRIN1|79647|akirin 1##AK092624|AKIRIN1|79647|akirin 1##AK124799|AKIRIN1|79647|akirin 1##AK126262|AKIRIN1|79647|akirin 1##AK223276|AKIRIN1|79647|akirin 1##AK298890|AKIRIN1|79647|akirin 1##AK303098|AKIRIN1|79647|akirin 1##BC001498|AKIRIN1|79647|akirin 1##BC119745|AKIRIN1|79647|akirin 1##BC119746|AKIRIN1|79647|akirin 1##AY326465|AKIRIN1|79647|akirin 1##NM_015038|KIAA0754|643314|KIAA0754##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a	0.183637	
chr14	36538800	36538919	reg1008458.p1	10.249	+	TSC_hg19_v1_chr14_+_36295599 NM_032352 AY827074 BC006250 AK297106 AK310359 AK315424	-243256	+	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	-260464	-	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	-260712	-	AB463855 CU677729 BX248287 TSC_hg19_v1_chr14_-_36789806 AF208857 BC016821 AK293473 BC005197 AB038523 AK315290 NM_001144891 NM_016586	250985	-	TSC_hg19_v1_chr14_-_36982983 BC042093 NM_001101341	444123	-	NM_003317 U33749	450043	-	NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BX248287|MBIP|51562|MAP3K12 binding inhibitory protein 1##AF208857|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC016821|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK293473|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC005197|MBIP|51562|MAP3K12 binding inhibitory protein 1##AB038523|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK315290|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_001144891|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_016586|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC042093|SFTA3|253970|surfactant associated 3##NM_001101341|SFTA3|253970|surfactant associated 3##NM_003317|NKX2-1|7080|NK2 homeobox 1##U33749|NKX2-1|7080|NK2 homeobox 1	0.957113	CTCF.p2:19:0.957
chr20	648182	648297	reg1011189.p2	10.249	+	TSC_hg19_v1_chr20_-_633845 AK127435 AL833944 NM_080725	-14373	-	BC017001 TSC_hg19_v1_chr20_-_633843 AM393140 AM393844 BC047707 BC032604 AK312054	-14414	-	NM_004609 U08336 TSC_hg19_v1_chr20_-_590953 BC067836	-57301	-	AK125343 TSC_hg19_v1_chr20_-_656445	8206	-	AY129025 NM_033129	8583	-	AK074650 BC009750 AK291706 NM_033409	100938	-	AK127435|SRXN1|140809|sulfiredoxin 1##AL833944|SRXN1|140809|sulfiredoxin 1##NM_080725|SRXN1|140809|sulfiredoxin 1##BC017001|SRXN1|140809|sulfiredoxin 1##AM393140|SRXN1|140809|sulfiredoxin 1##AM393844|SRXN1|140809|sulfiredoxin 1##BC047707|SRXN1|140809|sulfiredoxin 1##BC032604|SRXN1|140809|sulfiredoxin 1##AK312054|SRXN1|140809|sulfiredoxin 1##NM_004609|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##U08336|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##BC067836|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##AY129025|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)##NM_033129|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)##AK074650|C20orf54|113278|chromosome 20 open reading frame 54##BC009750|C20orf54|113278|chromosome 20 open reading frame 54##AK291706|C20orf54|113278|chromosome 20 open reading frame 54##NM_033409|C20orf54|113278|chromosome 20 open reading frame 54	0.999512	CTCF.p2:7:1.000
chr8	132049288	132049402	reg1011542.p1	10.249	+	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	-593314	-	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-1020462	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-1020651	-	NM_001115	3489	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	867012	+	TSC_hg19_v1_chr8_+_132916379 BC108667	867032	+	NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC108667|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.916197	CTCF.p2:-9:0.916
chr11	76758851	76758972	reg1011536.p3	10.248	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	-13452	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	-186918	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	-186979	+	TSC_hg19_v1_chr11_+_76778017 BC018123 NM_004055 AK128124 AK313132 AK310978 AK094150 AB209087	19116	+	CU686775 BC069115 BC069365 NM_006189	54973	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	80417	+	NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##BC018123|CAPN5|726|calpain 5##NM_004055|CAPN5|726|calpain 5##AK128124|CAPN5|726|calpain 5##AK313132|CAPN5|726|calpain 5##AK310978|CAPN5|726|calpain 5##AK094150|CAPN5|726|calpain 5##AB209087|CAPN5|726|calpain 5##BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA	0.98839	CTCF.p2:10:0.988
chr16	84772188	84772314	reg1009496.p2	10.248	+	TSC_hg19_v1_chr16_+_84733611 AL162049 BX537402 D80012	-38621	+	TSC_hg19_v1_chr16_+_84733609 AK293304 AK299618	-38644	+	TSC_hg19_v1_chr16_+_84733603 AK315570 CR749515	-38651	+	TSC_hg19_v1_chr16_+_84853586 NM_031476 AY358790 AK303887 AK308396 AY358413 BC063012 BC007689 AL136861 AK027395	81352	+	TSC_hg19_v1_chr16_-_85045098 AK225768	272842	-	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	272878	-	AL162049|USP10|9100|ubiquitin specific peptidase 10##BX537402|USP10|9100|ubiquitin specific peptidase 10##D80012|USP10|9100|ubiquitin specific peptidase 10##AK293304|USP10|9100|ubiquitin specific peptidase 10##AK299618|USP10|9100|ubiquitin specific peptidase 10##AK315570|USP10|9100|ubiquitin specific peptidase 10##CR749515|USP10|9100|ubiquitin specific peptidase 10##NM_031476|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AY358790|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK303887|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK308396|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC063012|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC007689|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AL136861|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK027395|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK225768|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7	0.997041	CTCF.p2:15:0.997
chr6	82980647	82980761	reg1010309.p1	10.247	+	TSC_hg19_v1_chr6_-_82957441 NM_015525 DQ005633 DQ005634	-23236	-	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	-23291	-	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	-518293	-	AK291170 NM_006670	92218	+	TSC_hg19_v1_chr6_+_83073565 BC037161 AK074786	92829	+	TSC_hg19_v1_chr6_+_83073996 AK074790 NM_001166392	93273	+	NM_015525|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005633|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005634|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein##BC037161|TPBG|7162|trophoblast glycoprotein##AK074786|TPBG|7162|trophoblast glycoprotein##AK074790|TPBG|7162|trophoblast glycoprotein##NM_001166392|TPBG|7162|trophoblast glycoprotein	0.927889	CTCF.p2:-13:0.928
chr11	2996971	2997067	reg1009779.p1	10.246	+	CR407664 AB464031 CU674965 AF019953 TSC_hg19_v1_chr11_-_2950651 BC005034 AF001294 AF035444 AK223027 NM_003311	-46394	-	NM_007105	-71845	-	TSC_hg19_v1_chr11_+_2924568 CU677351 EU176788	-72476	+	TSC_hg19_v1_chr11_-_3013513 BC022090 AK316242 AK316548	16481	-	TSC_hg19_v1_chr11_-_3013522 AK299515	16506	-	AK316324 TSC_hg19_v1_chr11_-_3013560	16536	-	CR407664|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AF019953|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##BC005034|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AF001294|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AF035444|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AK223027|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##NM_003311|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##NM_007105|SLC22A18AS|5003|solute carrier family 22 (organic cation transporter), member 18 antisense##EU176788|SLC22A18|5002|solute carrier family 22, member 18##BC022090|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316242|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316548|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4	0.775694	CTCF.p2:-6:0.776
chr3	61367577	61367718	reg1012196.p1	10.246	+	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	-130557	-	BC050317 TSC_hg19_v1_chr3_-_59035759	-2331887	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-2331906	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	179564	+	BC047734 TSC_hg19_v1_chr3_+_61547294	179639	+	L09247 AB385117 TSC_hg19_v1_chr3_+_61548071	180329	+	BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.999835	CTCF.p2:0:1.000
chr5	101278059	101278183	reg1012766.p1	10.246	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-1039193	-	AF529367 TSC_hg19_v1_chr5_+_99871306	-1406851	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-1407048	+	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	353987	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	556512	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	923409	+	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase	0.123816	
chr6	75914045	75914180	reg1013531.p1	10.246	+	TSC_hg19_v1_chr6_+_74406033 AY149920	-1508088	+	EF553520 TSC_hg19_v1_chr6_+_74405925 AY788891 BX641095	-1508192	+	TSC_hg19_v1_chr6_+_74405882 AK095888	-1508241	+	BC146868 U73778 NM_004370 NM_080645 TSC_hg19_v1_chr6_-_75915745	1543	-	TSC_hg19_v1_chr6_-_75915768 AK307558	1668	-	CR407646 CR542125 X15822 TSC_hg19_v1_chr6_-_75953494 BC101826 BC101828 AK312154	39367	-	AY149920|CD109|135228|CD109 molecule##EF553520|CD109|135228|CD109 molecule##AY788891|CD109|135228|CD109 molecule##BX641095|CD109|135228|CD109 molecule##AK095888|CD109|135228|CD109 molecule##BC146868|COL12A1|1303|collagen, type XII, alpha 1##U73778|COL12A1|1303|collagen, type XII, alpha 1##NM_004370|COL12A1|1303|collagen, type XII, alpha 1##NM_080645|COL12A1|1303|collagen, type XII, alpha 1##AK307558|COL12A1|1303|collagen, type XII, alpha 1##CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	0.0	
chr10	16819545	16819680	reg1012211.p1	10.245	+	NM_001010908	-255609	-	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	-340627	+	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	-917121	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	39747	-	TSC_hg19_v1_chr10_-_16859397 AK225681 AK312520	39782	-	TSC_hg19_v1_chr10_-_16859451 BC015644 BC005993 BC107898 BX647733 NM_012425 NM_152724	39823	-	NM_001010908|C1QL3|389941|complement component 1, q subcomponent-like 3##AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1##AK225681|RSU1|6251|Ras suppressor protein 1##AK312520|RSU1|6251|Ras suppressor protein 1##BC015644|RSU1|6251|Ras suppressor protein 1##BC005993|RSU1|6251|Ras suppressor protein 1##BC107898|RSU1|6251|Ras suppressor protein 1##BX647733|RSU1|6251|Ras suppressor protein 1##NM_012425|RSU1|6251|Ras suppressor protein 1##NM_152724|RSU1|6251|Ras suppressor protein 1	0.984459	CTCF.p2:13:0.984
chr10	59417036	59417153	reg1011210.p1	10.245	+	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	-1296068	-	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	-1296080	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	-2058320	+	TSC_hg19_v1_chr10_-_60027655 BC016612 BC065709 NM_152230	610567	-	BC005962 TSC_hg19_v1_chr10_+_60028929 NM_018464 BC059168 AF220049 BC008474 BC007043 AY960578 AK312017	611852	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	677742	+	AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##BC016612|IPMK|253430|inositol polyphosphate multikinase##BC065709|IPMK|253430|inositol polyphosphate multikinase##NM_152230|IPMK|253430|inositol polyphosphate multikinase##BC005962|CISD1|55847|CDGSH iron sulfur domain 1##NM_018464|CISD1|55847|CDGSH iron sulfur domain 1##BC059168|CISD1|55847|CDGSH iron sulfur domain 1##AF220049|CISD1|55847|CDGSH iron sulfur domain 1##BC008474|CISD1|55847|CDGSH iron sulfur domain 1##BC007043|CISD1|55847|CDGSH iron sulfur domain 1##AY960578|CISD1|55847|CDGSH iron sulfur domain 1##AK312017|CISD1|55847|CDGSH iron sulfur domain 1##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	0.908069	CTCF.p2:10:0.908
chr7	66359912	66360040	reg1010944.p2	10.245	+	TSC_hg19_v1_chr7_+_66205719 AJ250042 AK223329 AK290678	-154246	+	TSC_hg19_v1_chr7_+_66205692 BC015330	-154282	+	NM_014504 TSC_hg19_v1_chr7_+_66205645	-154332	+	TSC_hg19_v1_chr7_+_66386215 AK222774 NM_017994 BC012562 AK000961 BC008675	26200	+	TSC_hg19_v1_chr7_+_66386228 BC041764	26255	+	TSC_hg19_v1_chr7_+_66386238 BC010519	26295	+	AJ250042|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK223329|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK290678|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##BC015330|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##NM_014504|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK222774|C7orf42|55069|chromosome 7 open reading frame 42##NM_017994|C7orf42|55069|chromosome 7 open reading frame 42##BC012562|C7orf42|55069|chromosome 7 open reading frame 42##AK000961|C7orf42|55069|chromosome 7 open reading frame 42##BC008675|C7orf42|55069|chromosome 7 open reading frame 42##BC041764|C7orf42|55069|chromosome 7 open reading frame 42##BC010519|C7orf42|55069|chromosome 7 open reading frame 42	0.0	
chr3	156957001	156957126	reg1010180.p1	10.244	+	NM_020307 AK122738	-78549	-	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	-79154	-	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-412952	+	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	197587	+	CU691278 AB384625 HQ258524 AL713656 BC101660 BC113555 NM_001167917	256153	-	AK027625 NM_024621	260330	-	NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long##HQ258524|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AL713656|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC101660|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC113555|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167917|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AK027625|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_024621|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	0.064196	
chr3	39250110	39250206	reg1009792.p1	10.244	+	BC127119 BC139782 AY375160 NM_194293 TSC_hg19_v1_chr3_-_39234085 AJ626899 AJ626900 NM_001198621 AK096421 BX648565 CR749430	-16073	-	NM_033027 TSC_hg19_v1_chr3_-_39195146	-55034	-	TSC_hg19_v1_chr3_-_39195053 BC038949 AB053121 BC028213	-55107	-	U28934 BC028078 U20350 AK307911 AK312373 AK225764 BC017855 NM_001337	71344	-	NM_001171172	71771	-	NM_001171171	72605	-	BC127119|XIRP1|165904|xin actin-binding repeat containing 1##BC139782|XIRP1|165904|xin actin-binding repeat containing 1##AY375160|XIRP1|165904|xin actin-binding repeat containing 1##NM_194293|XIRP1|165904|xin actin-binding repeat containing 1##AJ626899|XIRP1|165904|xin actin-binding repeat containing 1##AJ626900|XIRP1|165904|xin actin-binding repeat containing 1##NM_001198621|XIRP1|165904|xin actin-binding repeat containing 1##AK096421|XIRP1|165904|xin actin-binding repeat containing 1##BX648565|XIRP1|165904|xin actin-binding repeat containing 1##CR749430|XIRP1|165904|xin actin-binding repeat containing 1##NM_033027|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC038949|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##AB053121|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC028213|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##U28934|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC028078|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##U20350|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK307911|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK312373|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK225764|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC017855|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001337|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171172|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171171|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1	1.00192	CTCF.p2:-10:0.988
chr12	2144188	2144295	reg1010374.p1	10.243	+	TSC_hg19_v1_chr12_-_2113622 AB463561 AK301109 AK056200 AK299203 BC043437 AY146652 NM_152640	-30570	-	BC150186 BX537436 BX537437 NM_172364 AF516695	-116340	-	TSC_hg19_v1_chr12_+_1929658 AK125402 AK095610 BC146894 BC146910 AK124687	-214482	+	TSC_hg19_v1_chr12_+_2162452 NM_000719 NM_001129827 NM_001129829 NM_001129830 NM_001129831 NM_001129832 NM_001129833 NM_001129834 NM_001129835 NM_001129836 NM_001129837 NM_001129838 NM_001129839 NM_001129840 NM_001129841 NM_001129842 NM_001129843 NM_001129844 NM_001129846 NM_001167623 NM_001167624 NM_001167625 NM_199460 AK309111 AF465484 AK308652 BC146846	18253	+	AB209016 AJ224873 AY830711 AY830712 AY830713 Z34809 Z34810 Z34811 Z34812 Z34813 Z34814 Z34815 Z34816 Z34817 Z34818 Z34819 Z34820 Z34821 Z34822 Z74996 TSC_hg19_v1_chr12_+_2162753	18487	+	TSC_hg19_v1_chr12_+_2904161 NM_002014 AK313918 BC001786 M88279 BC007924	759913	+	AK301109|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK056200|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK299203|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC043437|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AY146652|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_152640|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC150186|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##BX537436|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##BX537437|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##NM_172364|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##AF516695|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##AK125402|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK095610|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##BC146894|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##BC146910|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK124687|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AB209016|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AJ224873|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830711|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830712|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830713|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34809|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34810|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34811|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34812|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34813|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34814|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34815|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34816|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34817|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34818|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34819|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34820|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34821|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34822|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z74996|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_002014|FKBP4|2288|FK506 binding protein 4, 59kDa##AK313918|FKBP4|2288|FK506 binding protein 4, 59kDa##BC001786|FKBP4|2288|FK506 binding protein 4, 59kDa##M88279|FKBP4|2288|FK506 binding protein 4, 59kDa##BC007924|FKBP4|2288|FK506 binding protein 4, 59kDa	0.997024	CTCF.p2:2:0.997
chr14	24881451	24881563	reg1011632.p1	10.243	+	TSC_hg19_v1_chr14_+_24868230 BC065283 NM_025081 AK021873	-13251	+	AK302271 NM_001198966 AK310433 EU887644 EU887645 EU887646 EU887647 EU887648 EU887649 AK300450	-43132	+	NM_001198965 NM_004554 BC037735 AK293185 TSC_hg19_v1_chr14_+_24837389 AK311078 AK311425 L41066 BC053855 AB527875 EU446638 EU887641 EU887642 EU887643	-44122	+	AY359070 NM_001039771	17223	-	TSC_hg19_v1_chr14_+_24899159 NM_015299 AK291680 BX161465 BC042554	17663	+	BX161384 TSC_hg19_v1_chr14_-_24911979 BC008566 AF226050 AK123513 BC000989 NM_020195	30387	-	BC065283|NYNRIN|57523|NYN domain and retroviral integrase containing##NM_025081|NYNRIN|57523|NYN domain and retroviral integrase containing##AK021873|NYNRIN|57523|NYN domain and retroviral integrase containing##AK302271|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198966|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK310433|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887644|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887645|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887646|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887647|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887648|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887649|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK300450|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198965|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_004554|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##BC037735|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK293185|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK311078|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK311425|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##L41066|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##BC053855|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU446638|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887641|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887642|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887643|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AY359070|CBLN3|643866|cerebellin 3 precursor##NM_001039771|CBLN3|643866|cerebellin 3 precursor##NM_015299|KHNYN|23351|KH and NYN domain containing##AK291680|KHNYN|23351|KH and NYN domain containing##BX161465|KHNYN|23351|KH and NYN domain containing##BC042554|KHNYN|23351|KH and NYN domain containing##BX161384|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##BC008566|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##AF226050|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##AK123513|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##BC000989|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##NM_020195|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1	0.0	
chr16	157160	157260	reg1011026.p1	10.243	+	TSC_hg19_v1_chr16_+_128241 AK308654 AY258284 L10752 AB463933 CU677157 DQ895912	-28940	+	TSC_hg19_v1_chr16_+_128229 BC014991	-28983	+	NM_001015052 NM_002434 TSC_hg19_v1_chr16_+_128206	-29023	+	AK298795 BC004185 BC012825 AK300736 BC020392 TSC_hg19_v1_chr16_-_188638	31244	-	TSC_hg19_v1_chr16_-_188673 AK090717 AK294228 NM_001039476 NM_001077350 NM_001243247 NM_001243248 NM_001243249	31469	-	NM_005332 BC027892 M24173 AB590422 DQ894080 EU176221 CR456848	45670	+	AK308654|MPG|4350|N-methylpurine-DNA glycosylase##AY258284|MPG|4350|N-methylpurine-DNA glycosylase##L10752|MPG|4350|N-methylpurine-DNA glycosylase##DQ895912|MPG|4350|N-methylpurine-DNA glycosylase##BC014991|MPG|4350|N-methylpurine-DNA glycosylase##NM_001015052|MPG|4350|N-methylpurine-DNA glycosylase##NM_002434|MPG|4350|N-methylpurine-DNA glycosylase##AK298795|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##BC004185|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##BC012825|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##AK300736|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##BC020392|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##AK090717|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##AK294228|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001039476|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001077350|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001243247|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001243248|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001243249|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_005332|HBZ|3050|hemoglobin, zeta##BC027892|HBZ|3050|hemoglobin, zeta##M24173|HBZ|3050|hemoglobin, zeta##DQ894080|HBZ|3050|hemoglobin, zeta##EU176221|HBZ|3050|hemoglobin, zeta##CR456848|HBZ|3050|hemoglobin, zeta	0.998528	CTCF.p2:0:0.999
chr3	56836267	56836377	reg1009705.p2	10.243	+	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	-411	-	AK293864 AB209661 NM_001128616	-26653	-	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-119115	-	AY221117 NM_181727 BC126274 BC136498	258181	+	AF433662 AK302493 NM_001128615	276991	-	AF458067 TSC_hg19_v1_chr3_-_57199347	363011	-	AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12##AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF458067|IL17RD|54756|interleukin 17 receptor D	0.936868	CTCF.p2:13:0.937
chr6	151797176	151797308	reg1012041.p1	10.243	+	AK298490 TSC_hg19_v1_chr6_+_151773653 AK310840 AL110241 BC011348 CU679902	-23600	+	AK022972 NM_024573	-23821	+	TSC_hg19_v1_chr6_-_151773262 BC119683 AK000634 BC106065 AK292339 NM_017909	-23984	-	NM_025059 BC060803 BC035003 AK225330 AK026958	17976	+	NM_001122742 U68068 AK309580 AB588629 AB588630	214451	+	NM_001122741 AK293019 AK313644	329581	+	AK298490|C6orf211|79624|chromosome 6 open reading frame 211##AK310840|C6orf211|79624|chromosome 6 open reading frame 211##AL110241|C6orf211|79624|chromosome 6 open reading frame 211##BC011348|C6orf211|79624|chromosome 6 open reading frame 211##AK022972|C6orf211|79624|chromosome 6 open reading frame 211##NM_024573|C6orf211|79624|chromosome 6 open reading frame 211##BC119683|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK000634|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##BC106065|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK292339|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##NM_017909|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##NM_025059|C6orf97|80129|chromosome 6 open reading frame 97##BC060803|C6orf97|80129|chromosome 6 open reading frame 97##BC035003|C6orf97|80129|chromosome 6 open reading frame 97##AK225330|C6orf97|80129|chromosome 6 open reading frame 97##AK026958|C6orf97|80129|chromosome 6 open reading frame 97##NM_001122742|ESR1|2099|estrogen receptor 1##U68068|ESR1|2099|estrogen receptor 1##AK309580|ESR1|2099|estrogen receptor 1##AB588629|ESR1|2099|estrogen receptor 1##AB588630|ESR1|2099|estrogen receptor 1##NM_001122741|ESR1|2099|estrogen receptor 1##AK293019|ESR1|2099|estrogen receptor 1##AK313644|ESR1|2099|estrogen receptor 1	0.999043	CTCF.p2:-5:0.999
chr6	43365858	43365977	reg1010974.p1	10.243	+	TSC_hg19_v1_chr6_-_43337215 BC098434 AF090114 NM_014345 BC030687	-28675	-	AB463553 AY555741 AY555742 AY555743 AY555744 NM_206922	-89388	-	TSC_hg19_v1_chr6_+_43266009 AK290806 AK309570 AK314822 BC033805 AK290796 BC017963 DQ893614 DQ896844 AF210455 AY050498	-99865	+	TSC_hg19_v1_chr6_+_43395310 AK000002 NM_001198934	29396	+	AY032599 NM_033450	33571	+	AY358126 NM_023932 BC110320	57355	-	BC098434|ZNF318|24149|zinc finger protein 318##AF090114|ZNF318|24149|zinc finger protein 318##NM_014345|ZNF318|24149|zinc finger protein 318##BC030687|ZNF318|24149|zinc finger protein 318##AY555741|CRIP3|401262|cysteine-rich protein 3##AY555742|CRIP3|401262|cysteine-rich protein 3##AY555743|CRIP3|401262|cysteine-rich protein 3##AY555744|CRIP3|401262|cysteine-rich protein 3##NM_206922|CRIP3|401262|cysteine-rich protein 3##AK290806|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK309570|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK314822|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC033805|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290796|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC017963|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ893614|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ896844|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF210455|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AY050498|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK000002|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_001198934|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##AY032599|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_033450|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##AY358126|DLK2|65989|delta-like 2 homolog (Drosophila)##NM_023932|DLK2|65989|delta-like 2 homolog (Drosophila)##BC110320|DLK2|65989|delta-like 2 homolog (Drosophila)	0.0	
chr15	36793433	36793534	reg1009304.p1	10.242	+	CU688170 TSC_hg19_v1_chr15_-_35838365 BC066652 AK094007 AL833427 AX748407 AK125017 NM_001141972 NM_080650	-955097	-	NM_014106 TSC_hg19_v1_chr15_-_35280498	-1512971	-	TSC_hg19_v1_chr15_-_35280489 BC071603 AK291438	-1513029	-	TSC_hg19_v1_chr15_+_36871914 NM_001130010 AK026504 BC006254	78416	+	NM_032499	139322	+	CU674744 EU831754 EU831831 TSC_hg19_v1_chr15_-_37390403 AK294411 AK311546 AK056038 NM_172315	596983	-	BC066652|ATPBD4|89978|ATP binding domain 4##AK094007|ATPBD4|89978|ATP binding domain 4##AL833427|ATPBD4|89978|ATP binding domain 4##AK125017|ATPBD4|89978|ATP binding domain 4##NM_001141972|ATPBD4|89978|ATP binding domain 4##NM_080650|ATPBD4|89978|ATP binding domain 4##NM_014106|ZNF770|54989|zinc finger protein 770##BC071603|ZNF770|54989|zinc finger protein 770##AK291438|ZNF770|54989|zinc finger protein 770##NM_001130010|C15orf41|84529|chromosome 15 open reading frame 41##AK026504|C15orf41|84529|chromosome 15 open reading frame 41##BC006254|C15orf41|84529|chromosome 15 open reading frame 41##NM_032499|C15orf41|84529|chromosome 15 open reading frame 41##EU831754|MEIS2|4212|Meis homeobox 2##EU831831|MEIS2|4212|Meis homeobox 2##AK294411|MEIS2|4212|Meis homeobox 2##AK311546|MEIS2|4212|Meis homeobox 2##AK056038|MEIS2|4212|Meis homeobox 2##NM_172315|MEIS2|4212|Meis homeobox 2	0.733765	CTCF.p2:-11:0.734
chr17	39065677	39065785	reg1008223.p1	10.242	+	AB528550 DQ890783 DQ896754 BC031559 TSC_hg19_v1_chr17_-_39041495 AK312744 NM_019010	-24265	-	D78367 NM_000223 AK313747	-42263	-	J04029 AB590331 DQ893356 DQ896675 BC034697 NM_000421 TSC_hg19_v1_chr17_-_38978867	-86884	-	AK314604 DQ891640 DQ894829 AK002047 TSC_hg19_v1_chr17_-_39092916 AF102848 AK289449 AK310880	27169	-	BC028356 AK302109 AL117538 NM_015515	28022	-	BC157887 BC171907 AJ786657 NM_213656	57409	-	DQ890783|KRT20|54474|keratin 20##DQ896754|KRT20|54474|keratin 20##BC031559|KRT20|54474|keratin 20##AK312744|KRT20|54474|keratin 20##NM_019010|KRT20|54474|keratin 20##D78367|KRT12|3859|keratin 12##NM_000223|KRT12|3859|keratin 12##AK313747|KRT12|3859|keratin 12##J04029|KRT10|3858|keratin 10##DQ893356|KRT10|3858|keratin 10##DQ896675|KRT10|3858|keratin 10##BC034697|KRT10|3858|keratin 10##NM_000421|KRT10|3858|keratin 10##AK314604|KRT23|25984|keratin 23 (histone deacetylase inducible)##DQ891640|KRT23|25984|keratin 23 (histone deacetylase inducible)##DQ894829|KRT23|25984|keratin 23 (histone deacetylase inducible)##AK002047|KRT23|25984|keratin 23 (histone deacetylase inducible)##AF102848|KRT23|25984|keratin 23 (histone deacetylase inducible)##AK289449|KRT23|25984|keratin 23 (histone deacetylase inducible)##AK310880|KRT23|25984|keratin 23 (histone deacetylase inducible)##BC028356|KRT23|25984|keratin 23 (histone deacetylase inducible)##AK302109|KRT23|25984|keratin 23 (histone deacetylase inducible)##AL117538|KRT23|25984|keratin 23 (histone deacetylase inducible)##NM_015515|KRT23|25984|keratin 23 (histone deacetylase inducible)##BC157887|KRT39|390792|keratin 39##BC171907|KRT39|390792|keratin 39##AJ786657|KRT39|390792|keratin 39##NM_213656|KRT39|390792|keratin 39	0.925111	CTCF.p2:-15:0.925
chr9	35051528	35051627	reg1010541.p1	10.241	+	NM_001040410 NM_203299 BC045643 AK097595 AK302123	-9335	+	NM_001040411 NM_001040412	-10476	+	AF088982 TSC_hg19_v1_chr9_+_34990719	-60859	+	BC121794 BC122550 BC110913 TSC_hg19_v1_chr9_-_35072566 AF100752	20980	-	TSC_hg19_v1_chr9_-_35072623 BC096751 AK312310 BC012195 BC017171 BC021055	21039	-	TSC_hg19_v1_chr9_-_35072646 NM_007126	21113	-	NM_001040410|C9orf131|138724|chromosome 9 open reading frame 131##NM_203299|C9orf131|138724|chromosome 9 open reading frame 131##BC045643|C9orf131|138724|chromosome 9 open reading frame 131##AK097595|C9orf131|138724|chromosome 9 open reading frame 131##AK302123|C9orf131|138724|chromosome 9 open reading frame 131##NM_001040411|C9orf131|138724|chromosome 9 open reading frame 131##NM_001040412|C9orf131|138724|chromosome 9 open reading frame 131##AF088982|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##BC121794|VCP|7415|valosin containing protein##BC122550|VCP|7415|valosin containing protein##BC110913|VCP|7415|valosin containing protein##AF100752|VCP|7415|valosin containing protein##BC096751|VCP|7415|valosin containing protein##AK312310|VCP|7415|valosin containing protein##BC012195|VCP|7415|valosin containing protein##BC017171|VCP|7415|valosin containing protein##NM_007126|VCP|7415|valosin containing protein	0.550541	CTCF.p2:-2:0.551
chr17	72598236	72598374	reg1013810.p1	10.240	+	EF137868 NM_001115152 AY358148	-9910	-	AK056444 NM_152460	-17249	+	TSC_hg19_v1_chr17_-_72542250 BC022279 NM_006678	-56043	-	BC100888 BC100889 BC100890 AK298031 AF395839 BX648376 AK303545 NM_181449	21540	-	NM_175738 TSC_hg19_v1_chr17_+_72667269 BC040547 AK290202	68962	+	TSC_hg19_v1_chr17_+_72667316 AK054846	69012	+	EF137868|CD300LD|100131439|CD300 molecule-like family member d##NM_001115152|CD300LD|100131439|CD300 molecule-like family member d##AY358148|CD300LD|100131439|CD300 molecule-like family member d##AK056444|C17orf77|146723|chromosome 17 open reading frame 77##NM_152460|C17orf77|146723|chromosome 17 open reading frame 77##BC022279|CD300C|10871|CD300c molecule##NM_006678|CD300C|10871|CD300c molecule##BC100888|CD300E|342510|CD300e molecule##BC100889|CD300E|342510|CD300e molecule##BC100890|CD300E|342510|CD300e molecule##AK298031|CD300E|342510|CD300e molecule##AF395839|CD300E|342510|CD300e molecule##BX648376|CD300E|342510|CD300e molecule##AK303545|CD300E|342510|CD300e molecule##NM_181449|CD300E|342510|CD300e molecule##NM_175738|RAB37|326624|RAB37, member RAS oncogene family##BC040547|RAB37|326624|RAB37, member RAS oncogene family##AK290202|RAB37|326624|RAB37, member RAS oncogene family##AK054846|RAB37|326624|RAB37, member RAS oncogene family	0.720294	CTCF.p2:-4:0.720
chr4	37568519	37568636	reg1011567.p1	10.240	+	NM_001104629 BC037906	-113002	+	NM_001144990	-321888	+	BC157885 NM_001170700	-1282934	+	AK001879 NM_018302 AK225192	17292	+	TSC_hg19_v1_chr4_-_37687999 BC039540 AK075468 NM_001085399 NM_001085400	119396	-	TSC_hg19_v1_chr4_+_37828307 NM_018290 AL136705 AK310927	259723	+	NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##NM_001144990|KIAA1239|57495|KIAA1239##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19##BC039540|RELL1|768211|RELT-like 1##AK075468|RELL1|768211|RELT-like 1##NM_001085399|RELL1|768211|RELT-like 1##NM_001085400|RELL1|768211|RELT-like 1##NM_018290|PGM2|55276|phosphoglucomutase 2##AL136705|PGM2|55276|phosphoglucomutase 2##AK310927|PGM2|55276|phosphoglucomutase 2	0.998354	CTCF.p2:-7:0.998
chr5	83223095	83223215	reg1010952.p1	10.240	+	AK313713 NM_001884 X17405 X78076 X78075	-206221	-	NM_001126336 NM_001164097 NM_001164098 NM_004385 TSC_hg19_v1_chr5_+_82767562 U16306 U26555 X15998 AK307642 AB209491 BC050524 D32039	-455538	+	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	-849772	+	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	457091	-	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	457509	-	TSC_hg19_v1_chr5_+_85913757 AK026505	2690603	+	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001126336|VCAN|1462|versican##NM_001164097|VCAN|1462|versican##NM_001164098|VCAN|1462|versican##NM_004385|VCAN|1462|versican##U16306|VCAN|1462|versican##U26555|VCAN|1462|versican##X15998|VCAN|1462|versican##AK307642|VCAN|1462|versican##AB209491|VCAN|1462|versican##BC050524|VCAN|1462|versican##D32039|VCAN|1462|versican##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc	0.993273	CTCF.p2:-8:0.993
chr9	125753710	125753832	reg1011498.p1	10.240	+	AK131449 TSC_hg19_v1_chr9_+_125703299 BC020609 NM_012197 AK022408 BC054492 AF161357 AJ011679	-50543	+	BC018748 NM_020924 TSC_hg19_v1_chr9_-_125693788	-59985	-	X82018 AK292401 BC037282 NM_006626	-78182	-	AK294531 AK299686 TSC_hg19_v1_chr9_+_125795928 AK313539	42096	+	AB384939 BC066885 BC066886 BC067532 BC067533 BC067534 CU688178 NM_005294	43074	+	TSC_hg19_v1_chr9_-_125874882 AK025814	121128	-	AK131449|RABGAP1|23637|RAB GTPase activating protein 1##BC020609|RABGAP1|23637|RAB GTPase activating protein 1##NM_012197|RABGAP1|23637|RAB GTPase activating protein 1##AK022408|RABGAP1|23637|RAB GTPase activating protein 1##BC054492|RABGAP1|23637|RAB GTPase activating protein 1##AF161357|RABGAP1|23637|RAB GTPase activating protein 1##AJ011679|RABGAP1|23637|RAB GTPase activating protein 1##BC018748|ZBTB26|57684|zinc finger and BTB domain containing 26##NM_020924|ZBTB26|57684|zinc finger and BTB domain containing 26##X82018|ZBTB6|10773|zinc finger and BTB domain containing 6##AK292401|ZBTB6|10773|zinc finger and BTB domain containing 6##BC037282|ZBTB6|10773|zinc finger and BTB domain containing 6##NM_006626|ZBTB6|10773|zinc finger and BTB domain containing 6##AK294531|RABGAP1|23637|RAB GTPase activating protein 1##AK299686|GPR21|2844|G protein-coupled receptor 21##AK313539|GPR21|2844|G protein-coupled receptor 21##BC066885|GPR21|2844|G protein-coupled receptor 21##BC066886|GPR21|2844|G protein-coupled receptor 21##BC067532|GPR21|2844|G protein-coupled receptor 21##BC067533|GPR21|2844|G protein-coupled receptor 21##BC067534|GPR21|2844|G protein-coupled receptor 21##NM_005294|GPR21|2844|G protein-coupled receptor 21##AK025814|MIR600HG|81571|MIR600 host gene (non-protein coding)	0.995952	CTCF.p2:9:0.996
chr14	55712531	55712639	reg1009461.p1	10.239	+	TSC_hg19_v1_chr14_-_55658298 BX248255 D13633 AK291847 AK299338 BC010658 AK297480 AB076695 NM_001146015 NM_014750	-54285	-	TSC_hg19_v1_chr14_-_55650349 BT007344	-62179	-	TSC_hg19_v1_chr14_+_55595969 AB006780 BC053667 BC068068 M36682 BC001120 M35368 M57710	-116600	+	NM_017943 AK092879 AX747787 TSC_hg19_v1_chr14_+_55738097 BC109120 BC109121	25474	+	TSC_hg19_v1_chr14_+_55738114 BX248268 BC095482	25573	+	NM_152231	26286	+	BX248255|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##D13633|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK291847|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK299338|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##BC010658|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK297480|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AB076695|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_001146015|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_014750|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AB006780|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC053667|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC068068|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M36682|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC001120|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M35368|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M57710|LGALS3|3958|lectin, galactoside-binding, soluble, 3##NM_017943|FBXO34|55030|F-box protein 34##AK092879|FBXO34|55030|F-box protein 34##BC109120|FBXO34|55030|F-box protein 34##BC109121|FBXO34|55030|F-box protein 34##BX248268|FBXO34|55030|F-box protein 34##BC095482|FBXO34|55030|F-box protein 34##NM_152231|FBXO34|55030|F-box protein 34	0.726771	CTCF.p2:2:0.727
chr19	34262577	34262693	reg1012764.p1	10.237	+	BC018723 NM_022467	-87202	+	TSC_hg19_v1_chr19_+_34112858 NM_001127895 NM_001127896 BC014250 BC011380 AB047801	-149700	+	TSC_hg19_v1_chr19_-_34012698 BT006692 CR541669 CU677179 DQ891114 DQ894294 BC004305 BC028295 AK225037 AK290756 J04605 AK293126 AK290781 AK291561 AK294619 BC015027 NM_000285 NM_001166056 NM_001166057	-249923	-	TSC_hg19_v1_chr19_+_34287743 NM_001129994 NM_001129995 NM_024076 AK027901 AK291465 BC001185 BC009335 AK225793 AK294543	25101	+	TSC_hg19_v1_chr19_+_34663327 BC016842 NM_001114093 NM_015578	400696	+	TSC_hg19_v1_chr19_+_34663429 AK300208	400791	+	BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127895|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127896|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC014250|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC011380|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##AB047801|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BT006692|PEPD|5184|peptidase D##CR541669|PEPD|5184|peptidase D##DQ891114|PEPD|5184|peptidase D##DQ894294|PEPD|5184|peptidase D##BC004305|PEPD|5184|peptidase D##BC028295|PEPD|5184|peptidase D##AK225037|PEPD|5184|peptidase D##AK290756|PEPD|5184|peptidase D##J04605|PEPD|5184|peptidase D##AK293126|PEPD|5184|peptidase D##AK290781|PEPD|5184|peptidase D##AK291561|PEPD|5184|peptidase D##AK294619|PEPD|5184|peptidase D##BC015027|PEPD|5184|peptidase D##NM_000285|PEPD|5184|peptidase D##NM_001166056|PEPD|5184|peptidase D##NM_001166057|PEPD|5184|peptidase D##NM_001129994|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_001129995|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_024076|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK027901|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK291465|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC001185|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC009335|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK225793|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK294543|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC016842|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_001114093|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_015578|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK300208|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)	0.995642	CTCF.p2:14:0.996
chr3	17300463	17300594	reg1011901.p1	10.237	+	BC036392 NM_015184	-325947	+	AB029015 NM_001144382	-374077	+	U65918 U66726 U66078 BC027595 NM_001351	-653562	-	AK310539 NM_001134381	440983	-	D86965 NM_014744	481870	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	483639	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.997816	CTCF.p2:-4:0.998
chr11	112160816	112160951	reg1011353.p1	10.236	+	AY364435 NM_001145024	-29301	-	TSC_hg19_v1_chr11_+_112097100 NM_000317 BC018029 D17400 AK310768 BC009686 AK307133 M97655 AM392676 AM393300 AM393668 DQ890961 DQ894133	-63756	+	NM_001037290 AK027801 AK297853 AB096252	-113778	+	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 TSC_hg19_v1_chr11_+_112831996 AK314589	671104	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	671248	+	X16841 TSC_hg19_v1_chr11_+_112832212	671323	+	AY364435|C11orf34|349633|chromosome 11 open reading frame 34##NM_001145024|C11orf34|349633|chromosome 11 open reading frame 34##NM_000317|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC018029|PTS|5805|6-pyruvoyltetrahydropterin synthase##D17400|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK310768|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC009686|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK307133|PTS|5805|6-pyruvoyltetrahydropterin synthase##M97655|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM392676|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393300|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393668|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ890961|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ894133|PTS|5805|6-pyruvoyltetrahydropterin synthase##NM_001037290|BCO2|83875|beta-carotene oxygenase 2##AK027801|BCO2|83875|beta-carotene oxygenase 2##AK297853|BCO2|83875|beta-carotene oxygenase 2##AB096252|BCO2|83875|beta-carotene oxygenase 2##NM_000615|NCAM1|4684|neural cell adhesion molecule 1##NM_001076682|NCAM1|4684|neural cell adhesion molecule 1##NM_001242607|NCAM1|4684|neural cell adhesion molecule 1##NM_001242608|NCAM1|4684|neural cell adhesion molecule 1##NM_181351|NCAM1|4684|neural cell adhesion molecule 1##AK314589|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1	0.965055	CTCF.p2:5:0.965
chr1	25224709	25224843	reg1010892.p1	10.236	+	TSC_hg19_v1_chr1_+_25071976 AF109196 AB463494 AM393644 CU680328 CR533501	-152771	+	TSC_hg19_v1_chr1_+_25071937 AK315051 AK301466 AK307142	-152843	+	NM_013943 TSC_hg19_v1_chr1_+_25071875 AL117424 AK001624 AK095959 BC012444 AF097330	-152945	+	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	31649	-	TSC_hg19_v1_chr1_-_25256761 AK301044	31963	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	32010	-	AF109196|CLIC4|25932|chloride intracellular channel 4##AM393644|CLIC4|25932|chloride intracellular channel 4##CR533501|CLIC4|25932|chloride intracellular channel 4##AK315051|CLIC4|25932|chloride intracellular channel 4##AK301466|CLIC4|25932|chloride intracellular channel 4##AK307142|CLIC4|25932|chloride intracellular channel 4##NM_013943|CLIC4|25932|chloride intracellular channel 4##AL117424|CLIC4|25932|chloride intracellular channel 4##AK001624|CLIC4|25932|chloride intracellular channel 4##AK095959|CLIC4|25932|chloride intracellular channel 4##BC012444|CLIC4|25932|chloride intracellular channel 4##AF097330|CLIC4|25932|chloride intracellular channel 4##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3	1.034946	CTCF.p2:4:0.981
chr2	10188934	10189060	reg1011117.p1	10.236	+	AB463821 TSC_hg19_v1_chr2_+_10186406	-2652	+	NM_001177718 AK302880 TSC_hg19_v1_chr2_+_10184414	-4588	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	-5205	+	AK091299 TSC_hg19_v1_chr2_-_10220297	31239	-	TSC_hg19_v1_chr2_-_10220367 AB590068 AF544983 NM_001037160	31432	-	NM_001165931 S40301 X59618 TSC_hg19_v1_chr2_+_10262805	73762	+	NM_001177718|KLF11|8462|Kruppel-like factor 11##AK302880|KLF11|8462|Kruppel-like factor 11##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11##AK091299|CYS1|192668|cystin 1##AF544983|CYS1|192668|cystin 1##NM_001037160|CYS1|192668|cystin 1##NM_001165931|RRM2|6241|ribonucleotide reductase M2##S40301|RRM2|6241|ribonucleotide reductase M2##X59618|RRM2|6241|ribonucleotide reductase M2	0.988008	CTCF.p2:7:0.988
chr17	80735795	80735891	reg1010440.p1	10.235	+	TSC_hg19_v1_chr17_+_80710051 AJ006417 DQ891885 EU176650	-25795	+	TSC_hg19_v1_chr17_+_80710000 AK091959 AX747278	-25835	+	TSC_hg19_v1_chr17_+_80709949 BC003094 NM_005993 AB023205 AK293471 BC006364	-25889	+	BC109036 BC109037 AK301690 AK023903 NM_024702	62066	-	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	270627	-	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	273826	-	AJ006417|TBCD|6904|tubulin folding cofactor D##DQ891885|TBCD|6904|tubulin folding cofactor D##EU176650|TBCD|6904|tubulin folding cofactor D##AK091959|TBCD|6904|tubulin folding cofactor D##BC003094|TBCD|6904|tubulin folding cofactor D##NM_005993|TBCD|6904|tubulin folding cofactor D##AB023205|TBCD|6904|tubulin folding cofactor D##AK293471|TBCD|6904|tubulin folding cofactor D##BC006364|TBCD|6904|tubulin folding cofactor D##BC109036|ZNF750|79755|zinc finger protein 750##BC109037|ZNF750|79755|zinc finger protein 750##AK301690|ZNF750|79755|zinc finger protein 750##AK023903|ZNF750|79755|zinc finger protein 750##NM_024702|ZNF750|79755|zinc finger protein 750##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1	0.830068	CTCF.p2:16:0.830
chr19	18572792	18572896	reg1010661.p1	10.235	+	AK296022 TSC_hg19_v1_chr19_-_18548975 AK092179 AX747394 NM_001170938 NM_016368	-23804	-	CU676344 DQ893465 DQ896336 AK001325 TSC_hg19_v1_chr19_-_18548942 AK093461 NM_001170939 AF207640 BC018952 AF086921 BC017189 BC066902 AF220530 AK021526	-23968	-	AL137749 NM_001253389	-24726	-	AB208794 TSC_hg19_v1_chr19_-_18632875 AK293105 AK225481 U16282	60022	-	TSC_hg19_v1_chr19_-_18632948 BC049195 NM_006532	60083	-	TSC_hg19_v1_chr19_-_18653874 AK300571	80933	-	AK296022|ISYNA1|51477|inositol-3-phosphate synthase 1##AK092179|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001170938|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_016368|ISYNA1|51477|inositol-3-phosphate synthase 1##DQ893465|ISYNA1|51477|inositol-3-phosphate synthase 1##DQ896336|ISYNA1|51477|inositol-3-phosphate synthase 1##AK001325|ISYNA1|51477|inositol-3-phosphate synthase 1##AK093461|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001170939|ISYNA1|51477|inositol-3-phosphate synthase 1##AF207640|ISYNA1|51477|inositol-3-phosphate synthase 1##BC018952|ISYNA1|51477|inositol-3-phosphate synthase 1##AF086921|ISYNA1|51477|inositol-3-phosphate synthase 1##BC066902|ISYNA1|51477|inositol-3-phosphate synthase 1##AF220530|ISYNA1|51477|inositol-3-phosphate synthase 1##AK021526|ISYNA1|51477|inositol-3-phosphate synthase 1##AL137749|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001253389|ISYNA1|51477|inositol-3-phosphate synthase 1##AB208794|ELL|8178|elongation factor RNA polymerase II##AK293105|ELL|8178|elongation factor RNA polymerase II##AK225481|ELL|8178|elongation factor RNA polymerase II##U16282|ELL|8178|elongation factor RNA polymerase II##BC049195|ELL|8178|elongation factor RNA polymerase II##NM_006532|ELL|8178|elongation factor RNA polymerase II##AK300571|FKBP8|23770|FK506 binding protein 8, 38kDa	0.965789	CTCF.p2:-2:0.966
chr2	157446203	157446356	reg1012698.p1	10.235	+	TSC_hg19_v1_chr2_+_157292921 U12424 BC019874	-153325	+	TSC_hg19_v1_chr2_+_157292894 NM_000408 AK292817	-153413	+	TSC_hg19_v1_chr2_+_157292178 AB209399 U36310 AK299645	-154045	+	BC142676 BC142703 AY277591 NM_014568 AK292154 BC144211	668014	+	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	736005	-	NM_001009959 AK296477	737877	-	U12424|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC019874|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_000408|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK292817|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AB209399|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U36310|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK299645|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein	0.886724	CTCF.p2:36:0.887
chr7	117390807	117390949	reg1012649.p1	10.234	+	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	-270840	+	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	-323333	-	BC078170 AK056742 NM_003391 X07876	-427543	-	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	122603	-	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	122665	-	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	433293	+	M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	0.973383	CTCF.p2:-29:0.973
chr10	104829482	104829615	reg1012622.p1	10.233	+	TSC_hg19_v1_chr10_+_104678078 BC021222 AK023479 NM_017649 NM_199076 NM_199077	-151491	+	NM_020682 AK057833 AK225972 AF226730 AK309737 BC119637 BC119638	-200291	+	NM_001136200 NM_144591 AL832477 TSC_hg19_v1_chr10_+_104614015 AK098071 BC015994 BC040069 AK311742	-215547	+	BX648078 TSC_hg19_v1_chr10_-_104953030 BC001595 AK127670 AK291667 AK312517 D38524 NM_001134373 NM_012229	123499	-	BC157875 BC171885 NM_001143909 BC137242 BC137243 BC157829 BC171806	176125	+	TSC_hg19_v1_chr10_+_105036894 BC006359 NM_032727 S78296 DQ892733 DQ895980	207325	+	BC021222|CNNM2|54805|cyclin M2##AK023479|CNNM2|54805|cyclin M2##NM_017649|CNNM2|54805|cyclin M2##NM_199076|CNNM2|54805|cyclin M2##NM_199077|CNNM2|54805|cyclin M2##NM_020682|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK057833|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK225972|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AF226730|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK309737|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119637|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119638|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32##NM_144591|C10orf32|119032|chromosome 10 open reading frame 32##AL832477|C10orf32|119032|chromosome 10 open reading frame 32##AK098071|C10orf32|119032|chromosome 10 open reading frame 32##BC015994|C10orf32|119032|chromosome 10 open reading frame 32##BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT readthrough##AK311742|C10orf32|119032|chromosome 10 open reading frame 32##BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II##BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II##AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II##AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II##AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II##D38524|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II##BC157875|LOC729020|729020|rcRPE##BC171885|LOC729020|729020|rcRPE##NM_001143909|LOC729020|729020|rcRPE##BC137242|LOC729020|729020|rcRPE##BC137243|LOC729020|729020|rcRPE##BC157829|LOC729020|729020|rcRPE##BC171806|LOC729020|729020|rcRPE##BC006359|INA|9118|internexin neuronal intermediate filament protein, alpha##NM_032727|INA|9118|internexin neuronal intermediate filament protein, alpha##S78296|INA|9118|internexin neuronal intermediate filament protein, alpha##DQ892733|INA|9118|internexin neuronal intermediate filament protein, alpha##DQ895980|INA|9118|internexin neuronal intermediate filament protein, alpha	0.999436	CTCF.p2:10:0.999
chr11	305077	305200	reg1010273.p1	10.233	+	BC150562 BC150563 NM_001025295	-5617	-	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	-15996	+	AF479748 AY154461 NM_138329	-26569	+	NM_006435 TSC_hg19_v1_chr11_+_308199 BC009696 DQ891667 DQ894615 BT009859 CR456894 CR541874 X02490	3032	+	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	8873	+	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	15706	-	BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##AF479748|NLRP6|171389|NLR family, pyrin domain containing 6##AY154461|NLRP6|171389|NLR family, pyrin domain containing 6##NM_138329|NLRP6|171389|NLR family, pyrin domain containing 6##NM_006435|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC009696|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ891667|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ894615|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BT009859|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR456894|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR541874|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##X02490|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3	0.969624	CTCF.p2:-13:0.970
chr16	167866	168002	reg1013238.p1	10.233	+	TSC_hg19_v1_chr16_+_128241 AK308654 AY258284 L10752 AB463933 CU677157 DQ895912	-39664	+	TSC_hg19_v1_chr16_+_128229 BC014991	-39707	+	NM_001015052 NM_002434 TSC_hg19_v1_chr16_+_128206	-39747	+	AK298795 BC004185 BC012825 AK300736 BC020392 TSC_hg19_v1_chr16_-_188638	20520	-	TSC_hg19_v1_chr16_-_188673 AK090717 AK294228 NM_001039476 NM_001077350 NM_001243247 NM_001243248 NM_001243249	20745	-	NM_005332 BC027892 M24173 AB590422 DQ894080 EU176221 CR456848	34946	+	AK308654|MPG|4350|N-methylpurine-DNA glycosylase##AY258284|MPG|4350|N-methylpurine-DNA glycosylase##L10752|MPG|4350|N-methylpurine-DNA glycosylase##DQ895912|MPG|4350|N-methylpurine-DNA glycosylase##BC014991|MPG|4350|N-methylpurine-DNA glycosylase##NM_001015052|MPG|4350|N-methylpurine-DNA glycosylase##NM_002434|MPG|4350|N-methylpurine-DNA glycosylase##AK298795|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##BC004185|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##BC012825|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##AK300736|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##BC020392|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##AK090717|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##AK294228|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001039476|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001077350|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001243247|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001243248|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001243249|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_005332|HBZ|3050|hemoglobin, zeta##BC027892|HBZ|3050|hemoglobin, zeta##M24173|HBZ|3050|hemoglobin, zeta##DQ894080|HBZ|3050|hemoglobin, zeta##EU176221|HBZ|3050|hemoglobin, zeta##CR456848|HBZ|3050|hemoglobin, zeta	0.948646	CTCF.p2:1:0.949
chr1	11021180	11021287	reg1010111.p1	10.232	+	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	-164528	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	-266682	-	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-486222	+	NM_001170754	20860	-	NM_007375 TSC_hg19_v1_chr1_+_11072715 AK299454 AK312416 BC001487 BC095435 BC071657 AL050265 AK222754 AK295920	51477	+	Y18282 TSC_hg19_v1_chr1_-_11107270 Y18283 X98400 Y09926 BC052299 BC067359 BC080556 Y18281 Y18284 AB008047	85986	-	DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127##NM_007375|TARDBP|23435|TAR DNA binding protein##AK299454|TARDBP|23435|TAR DNA binding protein##AK312416|TARDBP|23435|TAR DNA binding protein##BC001487|TARDBP|23435|TAR DNA binding protein##BC095435|TARDBP|23435|TAR DNA binding protein##BC071657|TARDBP|23435|TAR DNA binding protein##AL050265|TARDBP|23435|TAR DNA binding protein##AK222754|TARDBP|23435|TAR DNA binding protein##AK295920|TARDBP|23435|TAR DNA binding protein##Y18282|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18283|MASP2|10747|mannan-binding lectin serine peptidase 2##X98400|MASP2|10747|mannan-binding lectin serine peptidase 2##Y09926|MASP2|10747|mannan-binding lectin serine peptidase 2##BC052299|MASP2|10747|mannan-binding lectin serine peptidase 2##BC067359|MASP2|10747|mannan-binding lectin serine peptidase 2##BC080556|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18281|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18284|MASP2|10747|mannan-binding lectin serine peptidase 2##AB008047|MASP2|10747|mannan-binding lectin serine peptidase 2	0.0	
chr2	176991886	176992015	reg1013338.p1	10.232	+	BC044855 NM_014213 TSC_hg19_v1_chr2_+_176987450 X59372 AB463755	-4481	+	NM_002148 AK309451 BC069619 BC074760 X59373 AB464584 EU446483	-10424	+	TSC_hg19_v1_chr2_+_176972007 BC109394 NM_021192	-19894	+	NM_001199747 NM_001199746 NM_019558 BC038709 BC090853	2580	+	NM_014621 X04706 AK313885 BC016763 TSC_hg19_v1_chr2_+_177016297 BC074797	24263	+	TSC_hg19_v1_chr2_+_177016337 AB464586	24399	+	BC044855|HOXD9|3235|homeobox D9##NM_014213|HOXD9|3235|homeobox D9##X59372|HOXD9|3235|homeobox D9##NM_002148|HOXD10|3236|homeobox D10##BC069619|HOXD10|3236|homeobox D10##BC074760|HOXD10|3236|homeobox D10##X59373|HOXD10|3236|homeobox D10##EU446483|HOXD10|3236|homeobox D10##BC109394|HOXD11|3237|homeobox D11##NM_021192|HOXD11|3237|homeobox D11##NM_001199747|HOXD8|3234|homeobox D8##NM_001199746|HOXD8|3234|homeobox D8##NM_019558|HOXD8|3234|homeobox D8##BC038709|HOXD8|3234|homeobox D8##BC090853|HOXD8|3234|homeobox D8##NM_014621|HOXD4|3233|homeobox D4##X04706|HOXD4|3233|homeobox D4##AK313885|HOXD4|3233|homeobox D4##BC016763|HOXD4|3233|homeobox D4##BC074797|HOXD4|3233|homeobox D4	0.916565	CTCF.p2:-11:0.917
chr7	95546020	95546166	reg1009218.p1	10.232	+	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	-144185	+	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	-320230	-	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-430800	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	405309	-	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	586734	-	CR456887 TSC_hg19_v1_chr7_-_96339159 AK309241 BC032782	793025	-	NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280##CR456887|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##AK309241|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##BC032782|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1	0.999774	CTCF.p2:-11:1.000
chr14	77782379	77782505	reg1013044.p1	10.231	+	TSC_hg19_v1_chr14_-_77737552 AF422797 NM_021257	-44841	-	TSC_hg19_v1_chr14_+_77648137 AK125159 BC136613 BC136614	-134269	+	TSC_hg19_v1_chr14_+_77648082 NM_020431	-134350	+	CU689220 AB209114 BC031651 TSC_hg19_v1_chr14_-_77787215 BX248027 AF105020 AY090480 NM_013382	4688	-	NM_145870 NM_145871 AK315154 BC001453 TSC_hg19_v1_chr14_+_77787378 AK309054 AK315609 BC052245 BC069047 AJ001838 U86529 CR456987	4928	+	NM_001513	5263	+	AF422797|NGB|58157|neuroglobin##NM_021257|NGB|58157|neuroglobin##AK125159|TMEM63C|57156|transmembrane protein 63C##BC136613|TMEM63C|57156|transmembrane protein 63C##BC136614|TMEM63C|57156|transmembrane protein 63C##NM_020431|TMEM63C|57156|transmembrane protein 63C##AB209114|POMT2|29954|protein-O-mannosyltransferase 2##BC031651|POMT2|29954|protein-O-mannosyltransferase 2##BX248027|POMT2|29954|protein-O-mannosyltransferase 2##AF105020|POMT2|29954|protein-O-mannosyltransferase 2##AY090480|POMT2|29954|protein-O-mannosyltransferase 2##NM_013382|POMT2|29954|protein-O-mannosyltransferase 2##NM_145870|GSTZ1|2954|glutathione transferase zeta 1##NM_145871|GSTZ1|2954|glutathione transferase zeta 1##AK315154|GSTZ1|2954|glutathione transferase zeta 1##BC001453|GSTZ1|2954|glutathione transferase zeta 1##AK309054|GSTZ1|2954|glutathione transferase zeta 1##AK315609|GSTZ1|2954|glutathione transferase zeta 1##BC052245|GSTZ1|2954|glutathione transferase zeta 1##AJ001838|GSTZ1|2954|glutathione transferase zeta 1##U86529|GSTZ1|2954|glutathione transferase zeta 1##CR456987|GSTZ1|2954|glutathione transferase zeta 1##NM_001513|GSTZ1|2954|glutathione transferase zeta 1	0.999704	CTCF.p2:-10:1.000
chr19	41047222	41047349	reg1013567.p1	10.231	+	TSC_hg19_v1_chr19_+_41036433 AK309418	-10854	+	TSC_hg19_v1_chr19_+_41036379 AF311856 NM_025213	-10905	+	AF082075 AF311855 NM_020971	-74198	+	TSC_hg19_v1_chr19_+_41082760 NM_138392 AF258553 AK075057 AK300819	35464	+	TSC_hg19_v1_chr19_+_41082789 BC022855	35503	+	AK312748 TSC_hg19_v1_chr19_+_41082792	35507	+	AK309418|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AF311856|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_025213|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AF082075|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AF311855|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_020971|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_138392|SHKBP1|92799|SH3KBP1 binding protein 1##AF258553|SHKBP1|92799|SH3KBP1 binding protein 1##AK075057|SHKBP1|92799|SH3KBP1 binding protein 1##AK300819|SHKBP1|92799|SH3KBP1 binding protein 1##BC022855|SHKBP1|92799|SH3KBP1 binding protein 1##AK312748|SHKBP1|92799|SH3KBP1 binding protein 1	0.976128	CTCF.p2:1:0.976
chr8	59614414	59614531	reg1012740.p1	10.231	+	NM_003580 TSC_hg19_v1_chr8_-_59572413	-42061	-	BC041124 TSC_hg19_v1_chr8_-_59572386	-42086	-	TSC_hg19_v1_chr8_-_59572336 AK292679 AK313991	-42159	-	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	417200	-	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	1579449	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	1814968	+	NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC041124|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##AK292679|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##AK313991|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family	0.782176	CTCF.p2:12:0.782
chr2	106137764	106137905	reg1013051.p1	10.229	+	NM_201557	-82605	-	TSC_hg19_v1_chr2_-_106015453 BC093049 CR936799 BC036085 BC021049 AK313841 L42176 NM_001039492 BC012742 BC014397 DQ266432 NM_001450 NM_201555	-122283	-	TSC_hg19_v1_chr2_+_105954010 AK127661 BC001310 NM_024093 DQ891212 DQ894395	-183810	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	223709	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	295141	+	NM_001004720 BC000103	330427	+	NM_201557|FHL2|2274|four and a half LIM domains 2##BC093049|FHL2|2274|four and a half LIM domains 2##CR936799|FHL2|2274|four and a half LIM domains 2##BC036085|FHL2|2274|four and a half LIM domains 2##AK313841|FHL2|2274|four and a half LIM domains 2##L42176|FHL2|2274|four and a half LIM domains 2##NM_001039492|FHL2|2274|four and a half LIM domains 2##BC012742|FHL2|2274|four and a half LIM domains 2##BC014397|FHL2|2274|four and a half LIM domains 2##DQ266432|FHL2|2274|four and a half LIM domains 2##NM_001450|FHL2|2274|four and a half LIM domains 2##NM_201555|FHL2|2274|four and a half LIM domains 2##AK127661|C2orf49|79074|chromosome 2 open reading frame 49##BC001310|C2orf49|79074|chromosome 2 open reading frame 49##NM_024093|C2orf49|79074|chromosome 2 open reading frame 49##DQ891212|C2orf49|79074|chromosome 2 open reading frame 49##DQ894395|C2orf49|79074|chromosome 2 open reading frame 49##NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2	0.971678	CTCF.p2:14:0.972
chr7	134959376	134959488	reg1012300.p1	10.229	+	AB464251 AF513502 NM_182489	-42702	+	TSC_hg19_v1_chr7_-_134896270 AK001606 BX640957 NM_014149	-63141	-	TSC_hg19_v1_chr7_-_134896267 AF161534 AK022935	-63170	-	BC035590 U71267 U71268 AL389980 TSC_hg19_v1_chr7_-_135194851 AK314540 AK074493 AK300365 NM_001008225 NM_001190847 NM_001190848 NM_001190849 NM_001190850 NM_013316	235428	-	TSC_hg19_v1_chr7_+_135242675 NM_015135 BC136624 AK297307 BC146784 D86978	283256	+	TSC_hg19_v1_chr7_+_135347230 NM_001130929 BC063529 BC073942 BC021734 BC107765 BC047474 BC016741 BC040872	387829	+	AB464251|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AF513502|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##NM_182489|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AK001606|WDR91|29062|WD repeat domain 91##BX640957|WDR91|29062|WD repeat domain 91##NM_014149|WDR91|29062|WD repeat domain 91##AF161534|WDR91|29062|WD repeat domain 91##AK022935|WDR91|29062|WD repeat domain 91##BC035590|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71267|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71268|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AL389980|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK314540|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK074493|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK300365|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001008225|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190847|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190848|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190849|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190850|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_013316|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_015135|NUP205|23165|nucleoporin 205kDa##BC136624|NUP205|23165|nucleoporin 205kDa##AK297307|NUP205|23165|nucleoporin 205kDa##BC146784|NUP205|23165|nucleoporin 205kDa##D86978|NUP205|23165|nucleoporin 205kDa##NM_001130929|C7orf73|647087|chromosome 7 open reading frame 73##BC063529|C7orf73|647087|chromosome 7 open reading frame 73##BC073942|C7orf73|647087|chromosome 7 open reading frame 73##BC021734|C7orf73|647087|chromosome 7 open reading frame 73##BC107765|C7orf73|647087|chromosome 7 open reading frame 73##BC047474|C7orf73|647087|chromosome 7 open reading frame 73##BC016741|C7orf73|647087|chromosome 7 open reading frame 73##BC040872|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4	0.861485	CTCF.p2:-8:0.861
chr10	108740976	108741084	reg1010784.p1	10.228	+	TSC_hg19_v1_chr10_-_108459000 AK123752	-281971	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-2339985	+	AB028982 NM_014978	-2340172	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	183346	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	2942179	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	2942247	-	AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.070576	
chr1	545976	546157	reg1007779.p5	10.228	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-178418	+	NM_001005484	-476976	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-516661	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	75976	-	TSC_hg19_v1_chr1_-_714015 BC006361	167951	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	216829	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	2.931006	CTCF.p2:-10:0.977	CTCF.p2:57:0.977	CTCF.p2:-78:0.977
chr2	187325318	187325420	reg1011440.p1	10.228	+	NM_173651	-722015	+	BC136602 TSC_hg19_v1_chr2_+_185463544	-1861877	+	BC142612 TSC_hg19_v1_chr2_+_185463319	-1862064	+	TSC_hg19_v1_chr2_+_187350986 AF220184 NM_018471 AK298615 AK001901 AK297658 AF289586	25561	+	TSC_hg19_v1_chr2_+_187351010 BC012336 AF161421 AF109366	25641	+	TSC_hg19_v1_chr2_+_187351051 BC021102 EU176353 AB587394 CU676824	25701	+	NM_173651|FSIP2|401024|fibrous sheath interacting protein 2##BC136602|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A##AF220184|ZC3H15|55854|zinc finger CCCH-type containing 15##NM_018471|ZC3H15|55854|zinc finger CCCH-type containing 15##AK298615|ZC3H15|55854|zinc finger CCCH-type containing 15##AK001901|ZC3H15|55854|zinc finger CCCH-type containing 15##AK297658|ZC3H15|55854|zinc finger CCCH-type containing 15##AF289586|ZC3H15|55854|zinc finger CCCH-type containing 15##BC012336|ZC3H15|55854|zinc finger CCCH-type containing 15##AF161421|ZC3H15|55854|zinc finger CCCH-type containing 15##AF109366|ZC3H15|55854|zinc finger CCCH-type containing 15##BC021102|ZC3H15|55854|zinc finger CCCH-type containing 15##EU176353|ZC3H15|55854|zinc finger CCCH-type containing 15	0.946197	CTCF.p2:10:0.946
chr8	27172911	27173054	reg1013103.p1	10.228	+	TSC_hg19_v1_chr8_+_27169015 BC036651 NM_173174	-3981	+	TSC_hg19_v1_chr8_-_27168793 AB029021 AF492463 BC018337 NM_171982	-4174	-	EU446781 TSC_hg19_v1_chr8_-_27168779 AK308236 BC069226	-4216	-	NM_004103 D45853 U43522	6941	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	10035	+	TSC_hg19_v1_chr8_+_27183049 BC042599	10070	+	BC036651|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173174|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB029021|TRIM35|23087|tripartite motif containing 35##AF492463|TRIM35|23087|tripartite motif containing 35##BC018337|TRIM35|23087|tripartite motif containing 35##NM_171982|TRIM35|23087|tripartite motif containing 35##EU446781|TRIM35|23087|tripartite motif containing 35##AK308236|TRIM35|23087|tripartite motif containing 35##BC069226|TRIM35|23087|tripartite motif containing 35##NM_004103|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##D45853|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##U43522|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta	0.637456	CTCF.p2:-21:0.637
chr10	6092836	6093017	reg1010748.p1	10.227	+	AF035279 BC107777 BC065506 NM_001243539	-72912	-	CR542023 HQ401283 AB590464 BC121140 AK304211 BC074726 BC121141 U31628 NM_002189 NM_172200	-73413	-	AF380349 NM_032807	-156578	+	AB528862 AK223313 K03122 X01057 AK313847 NM_000417	11296	-	TSC_hg19_v1_chr10_+_6130954 NM_032905	38023	+	TSC_hg19_v1_chr10_+_6131024 AF542550 AK314952	38073	+	AF035279|IL15RA|3601|interleukin 15 receptor, alpha##BC107777|IL15RA|3601|interleukin 15 receptor, alpha##BC065506|IL15RA|3601|interleukin 15 receptor, alpha##NM_001243539|IL15RA|3601|interleukin 15 receptor, alpha##CR542023|IL15RA|3601|interleukin 15 receptor, alpha##HQ401283|IL15RA|3601|interleukin 15 receptor, alpha##BC121140|IL15RA|3601|interleukin 15 receptor, alpha##AK304211|IL15RA|3601|interleukin 15 receptor, alpha##BC074726|IL15RA|3601|interleukin 15 receptor, alpha##BC121141|IL15RA|3601|interleukin 15 receptor, alpha##U31628|IL15RA|3601|interleukin 15 receptor, alpha##NM_002189|IL15RA|3601|interleukin 15 receptor, alpha##NM_172200|IL15RA|3601|interleukin 15 receptor, alpha##AF380349|FBXO18|84893|F-box protein, helicase, 18##NM_032807|FBXO18|84893|F-box protein, helicase, 18##AK223313|IL2RA|3559|interleukin 2 receptor, alpha##K03122|IL2RA|3559|interleukin 2 receptor, alpha##X01057|IL2RA|3559|interleukin 2 receptor, alpha##AK313847|IL2RA|3559|interleukin 2 receptor, alpha##NM_000417|IL2RA|3559|interleukin 2 receptor, alpha##NM_032905|RBM17|84991|RNA binding motif protein 17##AF542550|RBM17|84991|RNA binding motif protein 17##AK314952|RBM17|84991|RNA binding motif protein 17	0.019533	
chr20	34744694	34744805	reg1012613.p1	10.227	+	TSC_hg19_v1_chr20_+_34742659 NM_012156 AB002336	-2084	+	CR936825 NM_177996	-44447	+	TSC_hg19_v1_chr20_+_34680631 AK096848 AK299817 AK126875 BC040259	-64098	+	TSC_hg19_v1_chr20_+_34824399 AL117419	79640	+	TSC_hg19_v1_chr20_+_34824402 BC001751 BC019311 NM_015511	79674	+	TSC_hg19_v1_chr20_+_34894262 AB023181	149506	+	NM_012156|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AB002336|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##CR936825|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##NM_177996|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK096848|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK299817|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK126875|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##BC040259|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AL117419|C20orf4|25980|chromosome 20 open reading frame 4##BC001751|C20orf4|25980|chromosome 20 open reading frame 4##BC019311|C20orf4|25980|chromosome 20 open reading frame 4##NM_015511|C20orf4|25980|chromosome 20 open reading frame 4##AB023181|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4	0.977435	CTCF.p2:-3:0.977
chr20	58326276	58326377	reg1009698.p1	10.227	+	AB098521 AB098522 NM_183244 NM_183246	-30062	+	AJ617581 NM_001199506 AK316047	-74610	+	BC108303 AJ311122 NM_080672 TSC_hg19_v1_chr20_+_58179660 BC117362 BC117364	-146672	+	BC132864 BC132870 NM_014258	180864	-	BX648091 BX649108 BC146798 TSC_hg19_v1_chr20_-_58508726	182381	-	AK125073 NM_001190826	182492	+	AB098521|PHACTR3|116154|phosphatase and actin regulator 3##AB098522|PHACTR3|116154|phosphatase and actin regulator 3##NM_183244|PHACTR3|116154|phosphatase and actin regulator 3##NM_183246|PHACTR3|116154|phosphatase and actin regulator 3##AJ617581|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199506|PHACTR3|116154|phosphatase and actin regulator 3##AK316047|PHACTR3|116154|phosphatase and actin regulator 3##BC108303|PHACTR3|116154|phosphatase and actin regulator 3##AJ311122|PHACTR3|116154|phosphatase and actin regulator 3##NM_080672|PHACTR3|116154|phosphatase and actin regulator 3##BC117362|PHACTR3|116154|phosphatase and actin regulator 3##BC117364|PHACTR3|116154|phosphatase and actin regulator 3##BC132864|SYCP2|10388|synaptonemal complex protein 2##BC132870|SYCP2|10388|synaptonemal complex protein 2##NM_014258|SYCP2|10388|synaptonemal complex protein 2##BX648091|SYCP2|10388|synaptonemal complex protein 2##BX649108|SYCP2|10388|synaptonemal complex protein 2##BC146798|SYCP2|10388|synaptonemal complex protein 2##AK125073|C20orf177|63939|chromosome 20 open reading frame 177##NM_001190826|C20orf177|63939|chromosome 20 open reading frame 177	0.953994	CTCF.p2:7:0.954
chr5	176498955	176499084	reg1013329.p1	10.227	+	AK297448 AK297584 NM_012279 TSC_hg19_v1_chr5_+_176449708 AK295549 AF083340 AK026627 AK300065 BC007775 AL359576 CR749692 AK131469 AK300738 AB463365 AM392799 AM393768	-49300	+	AK304794 BX537376 NM_016290 AK023044 BC032561 BC006078 BC014069 AF349313 NM_001199297 NM_001199298 TSC_hg19_v1_chr5_-_176433806	-65431	-	U51333 BC028129 NM_002115	-172696	-	TSC_hg19_v1_chr5_+_176513910 BC011847 AK301169 AK225280 AK225909 NM_002011 NM_213647 L03840	14863	+	NM_022963 X57205 AF202063 EU826602 AF359241 AB590389 DQ893458 DQ896348 EU826603 JN007471 JN007472 JN007473 JN007474 JN007475 JN007476 JN007477 JN007478 JN007479 JN007480 JN007481 JN007482	17557	+	TSC_hg19_v1_chr5_+_176560037 AK126591	61011	+	AK297448|ZNF346|23567|zinc finger protein 346##NM_012279|ZNF346|23567|zinc finger protein 346##AK295549|ZNF346|23567|zinc finger protein 346##AF083340|ZNF346|23567|zinc finger protein 346##AK026627|ZNF346|23567|zinc finger protein 346##AK300065|ZNF346|23567|zinc finger protein 346##BC007775|ZNF346|23567|zinc finger protein 346##AL359576|ZNF346|23567|zinc finger protein 346##CR749692|ZNF346|23567|zinc finger protein 346##AK131469|ZNF346|23567|zinc finger protein 346##AK300738|ZNF346|23567|zinc finger protein 346##AM392799|ZNF346|23567|zinc finger protein 346##AM393768|ZNF346|23567|zinc finger protein 346##AK304794|UIMC1|51720|ubiquitin interaction motif containing 1##BX537376|UIMC1|51720|ubiquitin interaction motif containing 1##NM_016290|UIMC1|51720|ubiquitin interaction motif containing 1##AK023044|UIMC1|51720|ubiquitin interaction motif containing 1##BC032561|UIMC1|51720|ubiquitin interaction motif containing 1##BC006078|UIMC1|51720|ubiquitin interaction motif containing 1##AF349313|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199297|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199298|UIMC1|51720|ubiquitin interaction motif containing 1##U51333|HK3|3101|hexokinase 3 (white cell)##BC028129|HK3|3101|hexokinase 3 (white cell)##NM_002115|HK3|3101|hexokinase 3 (white cell)##BC011847|FGFR4|2264|fibroblast growth factor receptor 4##AK301169|FGFR4|2264|fibroblast growth factor receptor 4##AK225280|FGFR4|2264|fibroblast growth factor receptor 4##AK225909|FGFR4|2264|fibroblast growth factor receptor 4##NM_002011|FGFR4|2264|fibroblast growth factor receptor 4##NM_213647|FGFR4|2264|fibroblast growth factor receptor 4##L03840|FGFR4|2264|fibroblast growth factor receptor 4##NM_022963|FGFR4|2264|fibroblast growth factor receptor 4##X57205|FGFR4|2264|fibroblast growth factor receptor 4##AF202063|FGFR4|2264|fibroblast growth factor receptor 4##EU826602|FGFR4|2264|fibroblast growth factor receptor 4##AF359241|FGFR4|2264|fibroblast growth factor receptor 4##DQ893458|FGFR4|2264|fibroblast growth factor receptor 4##DQ896348|FGFR4|2264|fibroblast growth factor receptor 4##EU826603|FGFR4|2264|fibroblast growth factor receptor 4##AK126591|NSD1|64324|nuclear receptor binding SET domain protein 1	0.926874	CTCF.p2:0:0.927
chr1	211871940	211872098	reg1012482.p1	10.226	+	BT019729 CU688108 AB527570 AY045701 Z29066 AK223353 AK225522 AK303092 TSC_hg19_v1_chr1_-_211848968 U11050 BC043502 BC065932 BC052807 NM_001204182 NM_001204183 NM_002497	-23111	-	TSC_hg19_v1_chr1_-_211752056 BC121015 BC121016 NM_021194	-119931	-	AB451467 TSC_hg19_v1_chr1_-_211752048	-120019	-	BC034621 TSC_hg19_v1_chr1_-_212003681	131729	-	D86960 NM_014873 TSC_hg19_v1_chr1_-_212004119	132111	-	AM392654 CU676544 BC030716 TSC_hg19_v1_chr1_-_212208866 BC033918 AK001363 AK022509 BC009918 BC020523 AK297225 AK001598 NM_001199809 NM_001199811 NM_001199812 NM_015434	336871	-	BT019729|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AY045701|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##Z29066|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK223353|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK225522|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK303092|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##U11050|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC043502|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC065932|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC052807|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204182|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204183|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_002497|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC121015|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121016|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##NM_021194|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC034621|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##AM392654|INTS7|25896|integrator complex subunit 7##BC030716|INTS7|25896|integrator complex subunit 7##BC033918|INTS7|25896|integrator complex subunit 7##AK001363|INTS7|25896|integrator complex subunit 7##AK022509|INTS7|25896|integrator complex subunit 7##BC009918|INTS7|25896|integrator complex subunit 7##BC020523|INTS7|25896|integrator complex subunit 7##AK297225|INTS7|25896|integrator complex subunit 7##AK001598|INTS7|25896|integrator complex subunit 7##NM_001199809|INTS7|25896|integrator complex subunit 7##NM_001199811|INTS7|25896|integrator complex subunit 7##NM_001199812|INTS7|25896|integrator complex subunit 7##NM_015434|INTS7|25896|integrator complex subunit 7	0.521773	CTCF.p2:-13:0.522
chr15	56721157	56721295	reg1011549.p1	10.226	+	TSC_hg19_v1_chr15_+_56657623 AK294960 BC028119 NM_198524 AL832050	-63597	+	TSC_hg19_v1_chr15_-_56535479 NM_022841	-185744	-	TSC_hg19_v1_chr15_-_56388663 AL832584	-332529	-	TSC_hg19_v1_chr15_-_56757262 BC031046 AK310029 BC012554 BC034991 AK002084 NM_018365	36060	-	TSC_hg19_v1_chr15_-_57025690 AB046804 BC053649 BC064359 AK310882 AK289739 BC130451 BC136412	304486	-	TSC_hg19_v1_chr15_-_57025818 BX641000 BX640707 NM_001002843 NM_001002844 NM_017661 AK295159	304606	-	AK294960|TEX9|374618|testis expressed 9##BC028119|TEX9|374618|testis expressed 9##NM_198524|TEX9|374618|testis expressed 9##AL832050|TEX9|374618|testis expressed 9##NM_022841|RFX7|64864|regulatory factor X, 7##AL832584|RFX7|64864|regulatory factor X, 7##BC031046|MNS1|55329|meiosis-specific nuclear structural 1##BC012554|MNS1|55329|meiosis-specific nuclear structural 1##BC034991|MNS1|55329|meiosis-specific nuclear structural 1##AK002084|MNS1|55329|meiosis-specific nuclear structural 1##NM_018365|MNS1|55329|meiosis-specific nuclear structural 1##AB046804|ZNF280D|54816|zinc finger protein 280D##BC053649|ZNF280D|54816|zinc finger protein 280D##BC064359|ZNF280D|54816|zinc finger protein 280D##AK310882|ZNF280D|54816|zinc finger protein 280D##AK289739|ZNF280D|54816|zinc finger protein 280D##BC130451|ZNF280D|54816|zinc finger protein 280D##BC136412|ZNF280D|54816|zinc finger protein 280D##BX641000|ZNF280D|54816|zinc finger protein 280D##BX640707|ZNF280D|54816|zinc finger protein 280D##NM_001002843|ZNF280D|54816|zinc finger protein 280D##NM_001002844|ZNF280D|54816|zinc finger protein 280D##NM_017661|ZNF280D|54816|zinc finger protein 280D##AK295159|ZNF280D|54816|zinc finger protein 280D	0.985926	CTCF.p2:25:0.986
chr5	144617598	144617725	reg1012854.p1	10.225	+	AK292477 CR749266 NM_020768	-1067246	+	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	-1067415	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	-1067485	-	TSC_hg19_v1_chr5_-_145214906 BC028175 AK095695 AK125215 NM_182960 NM_205846 BC012033 NM_138492	597227	-	NM_001080516	634869	-	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	698510	+	AK292477|KCTD16|57528|potassium channel tetramerisation domain containing 16##CR749266|KCTD16|57528|potassium channel tetramerisation domain containing 16##NM_020768|KCTD16|57528|potassium channel tetramerisation domain containing 16##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC028175|PRELID2|153768|PRELI domain containing 2##AK095695|PRELID2|153768|PRELI domain containing 2##AK125215|PRELID2|153768|PRELI domain containing 2##NM_182960|PRELID2|153768|PRELI domain containing 2##NM_205846|PRELID2|153768|PRELI domain containing 2##BC012033|PRELID2|153768|PRELI domain containing 2##NM_138492|PRELID2|153768|PRELI domain containing 2##NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2	0.927738	CTCF.p2:1:0.928
chr1	224645354	224645479	reg1010002.p2	10.224	+	AB209887 NM_001115113 NM_025160	-23416	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-23656	-	BC000573 TSC_hg19_v1_chr1_+_224544609 AK222634 BX649076 AM392966 AM393151 AM393502 DQ891901 DQ895087	-100805	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	158763	+	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	471949	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	970313	-	AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##BC000573|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK222634|CNIH4|29097|cornichon homolog 4 (Drosophila)##BX649076|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM392966|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM393151|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM393502|CNIH4|29097|cornichon homolog 4 (Drosophila)##DQ891901|CNIH4|29097|cornichon homolog 4 (Drosophila)##DQ895087|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor	0.976167	CTCF.p2:-4:0.976
chr7	73082113	73082203	reg1009562.p2	10.224	+	TSC_hg19_v1_chr7_-_73038853 AF245470 AF245471 AF245472 AF245473 AF245474 AB527610 BC012925 AF156603 NM_032951 NM_032952 NM_032953 NM_032954	-43288	-	TSC_hg19_v1_chr7_-_72993012 NM_012453	-89133	-	TSC_hg19_v1_chr7_-_72992936 BC047354 AL080162	-89196	-	TSC_hg19_v1_chr7_+_73082160 AY081952 BC029730 NM_001077621	56	+	TSC_hg19_v1_chr7_+_73082320 BC064621	165	+	TSC_hg19_v1_chr7_-_73097770 AK303989 CU674979 AK058113 AF412025 BC005056 AK094305 NM_032317	15600	-	AF245470|MLXIPL|51085|MLX interacting protein-like##AF245471|MLXIPL|51085|MLX interacting protein-like##AF245472|MLXIPL|51085|MLX interacting protein-like##AF245473|MLXIPL|51085|MLX interacting protein-like##AF245474|MLXIPL|51085|MLX interacting protein-like##BC012925|MLXIPL|51085|MLX interacting protein-like##AF156603|MLXIPL|51085|MLX interacting protein-like##NM_032951|MLXIPL|51085|MLX interacting protein-like##NM_032952|MLXIPL|51085|MLX interacting protein-like##NM_032953|MLXIPL|51085|MLX interacting protein-like##NM_032954|MLXIPL|51085|MLX interacting protein-like##NM_012453|TBL2|26608|transducin (beta)-like 2##BC047354|TBL2|26608|transducin (beta)-like 2##AL080162|TBL2|26608|transducin (beta)-like 2##AY081952|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##BC029730|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##NM_001077621|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##BC064621|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##AK058113|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30##AF412025|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30##BC005056|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30##AK094305|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30##NM_032317|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30	0.995813	CTCF.p2:-4:0.996
chr7	98384560	98384683	reg1009888.p1	10.224	+	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	-137885	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-354188	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-354327	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	82909	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	83006	-	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	83055	-	NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130	0.991239	CTCF.p2:5:0.991
chr18	44742066	44742180	reg1010597.p1	10.223	+	TSC_hg19_v1_chr18_-_44702736 NM_016097	-39373	-	TSC_hg19_v1_chr18_-_44702734 AK027108	-39390	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	-39434	-	BC014840 NM_005901	714802	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	715092	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	715366	-	NM_016097|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2	0.652293	CTCF.p2:-15:0.652
chr8	140418136	140418251	reg1011435.p1	10.223	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	-491949	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-909087	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-3947992	+	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	297089	-	AB067469 TSC_hg19_v1_chr8_-_141467841	1049632	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	1049665	-	AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9	0.999201	CTCF.p2:-10:0.999
chr10	50802713	50802843	reg1010616.p1	10.222	+	TSC_hg19_v1_chr10_-_50747117 AK291018 NM_000124	-55653	-	TSC_hg19_v1_chr10_-_50747072 BC127104 L04791	-55721	-	BC028954 AK074682 BC063690 NM_170753	-70528	-	AF305909 D82342 NM_020984	14362	+	NM_003055 U09210 BC007765 AK313094	15623	+	D82340 NM_020985 NM_020986 D82339 D82341	18380	+	AK291018|PGBD3|267004|piggyBac transposable element derived 3##NM_000124|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6##BC127104|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6##L04791|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6##BC028954|PGBD3|267004|piggyBac transposable element derived 3##AK074682|PGBD3|267004|piggyBac transposable element derived 3##BC063690|PGBD3|267004|piggyBac transposable element derived 3##NM_170753|PGBD3|267004|piggyBac transposable element derived 3##AF305909|CHAT|1103|choline O-acetyltransferase##D82342|CHAT|1103|choline O-acetyltransferase##NM_020984|CHAT|1103|choline O-acetyltransferase##NM_003055|SLC18A3|6572|solute carrier family 18 (vesicular acetylcholine), member 3##U09210|SLC18A3|6572|solute carrier family 18 (vesicular acetylcholine), member 3##BC007765|SLC18A3|6572|solute carrier family 18 (vesicular acetylcholine), member 3##AK313094|SLC18A3|6572|solute carrier family 18 (vesicular acetylcholine), member 3##D82340|CHAT|1103|choline O-acetyltransferase##NM_020985|CHAT|1103|choline O-acetyltransferase##NM_020986|CHAT|1103|choline O-acetyltransferase##D82339|CHAT|1103|choline O-acetyltransferase##D82341|CHAT|1103|choline O-acetyltransferase	0.971642	CTCF.p2:-19:0.972
chr13	111720243	111720360	reg1011996.p1	10.222	+	AK000100 NM_017664 TSC_hg19_v1_chr13_-_111567417	-152885	-	TSC_hg19_v1_chr13_-_111567375 BC001727 AK096083 BC039715	-152936	-	CU674848 CU691752 TSC_hg19_v1_chr13_-_111567293	-153014	-	TSC_hg19_v1_chr13_+_111767658 BC060776 NM_001113511 NM_001113512 NM_145735 BC033905 AL834228 CU687414 CU689800 EU832819 GQ129214	47428	+	AK300157 TSC_hg19_v1_chr13_+_111806035	85735	+	TSC_hg19_v1_chr13_+_111806041 AB177849 NM_003899	85750	+	AK000100|ANKRD10|55608|ankyrin repeat domain 10##NM_017664|ANKRD10|55608|ankyrin repeat domain 10##BC001727|ANKRD10|55608|ankyrin repeat domain 10##AK096083|ANKRD10|55608|ankyrin repeat domain 10##BC039715|ANKRD10|55608|ankyrin repeat domain 10##BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK300157|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AB177849|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_003899|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	0.287158	CTCF.p2:5:0.287
chr22	42253709	42253850	reg1013711.p1	10.222	+	TSC_hg19_v1_chr22_+_42229269 CU013184 CU013472 AB463291	-24508	+	TSC_hg19_v1_chr22_+_42229253 BC056158 U02031 BC051385 CT841522 AK299914	-24578	+	TSC_hg19_v1_chr22_+_42229114 BC051799	-24667	+	NM_001207020	56891	-	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	69020	-	EU035297 NM_001110215	82443	-	CU013184|SREBF2|6721|sterol regulatory element binding transcription factor 2##CU013472|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC056158|SREBF2|6721|sterol regulatory element binding transcription factor 2##U02031|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051385|SREBF2|6721|sterol regulatory element binding transcription factor 2##CT841522|SREBF2|6721|sterol regulatory element binding transcription factor 2##AK299914|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051799|SREBF2|6721|sterol regulatory element binding transcription factor 2##NM_001207020|SHISA8|440829|shisa homolog 8 (Xenopus laevis)##AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M	0.747928	CTCF.p2:8:0.748
chr6	151007186	151007308	reg1011422.p2	10.222	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	-86227	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	-317089	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-543006	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	179585	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	179674	+	TSC_hg19_v1_chr6_+_151187064 AL117452	179854	+	NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AL117452|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.998226	CTCF.p2:-7:0.998
chr9	87019123	87019268	reg1010217.p1	10.222	+	AF305210 NM_022127	-35783	-	BC093821 BC093823 AK310861 AK304406 AK314039 AK292849 NM_001199633	-63561	-	NM_024945 TSC_hg19_v1_chr9_+_86595689 BC039999 BC020606 AK022950 BC044571 BC053549 BC032494	-423486	+	TSC_hg19_v1_chr9_+_87283453 BC075804 NM_001018064 NM_006180 AB209118	264266	+	TSC_hg19_v1_chr9_+_87284577 NM_001018065 NM_001018066	265388	+	NM_001007097 TSC_hg19_v1_chr9_+_87284627	265431	+	AF305210|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_022127|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093821|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093823|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK310861|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK304406|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK314039|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK292849|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_001199633|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_024945|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC039999|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC020606|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##AK022950|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC044571|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC053549|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC032494|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC075804|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018064|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_006180|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB209118|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018065|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018066|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001007097|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	0.965695	CTCF.p2:2:0.966
chr4	184178070	184178181	reg1011656.p1	10.221	+	TSC_hg19_v1_chr4_+_184020431 NM_024949	-157647	+	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	-339491	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	-339595	-	NM_001111319	63801	-	NM_001185149	65453	-	TSC_hg19_v1_chr4_+_184365788 AK000043 NM_017632	187661	+	NM_024949|WWC2|80014|WW and C2 domain containing 2##NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001111319|CLDN22|53842|claudin 22##NM_001185149|CLDN24|100132463|claudin 24##AK000043|CDKN2AIP|55602|CDKN2A interacting protein##NM_017632|CDKN2AIP|55602|CDKN2A interacting protein	0.958553	CTCF.p2:3:0.902
chr9	87569121	87569239	reg1011174.p1	10.221	+	U12140 TSC_hg19_v1_chr9_+_87285349	-283848	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-284428	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-284484	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	787691	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	986894	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	986998	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.014357	
chr12	1202439	1202592	reg1012388.p1	10.220	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-102063	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-143689	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-185433	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	500836	-	AY009399 NM_030775	523706	+	BC001749 NM_032642	535896	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.0	
chr1	221717191	221717332	reg1011192.p2	10.220	+	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	-664162	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	-664347	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	-664500	+	NM_144728	193540	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	198147	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	198169	-	DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##NM_144728|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10	0.185154	
chr14	72759202	72759357	reg1010537.p1	10.220	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-359413	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-360126	+	AK294895 NM_001204423	-360463	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	601529	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	633856	+	AK098542 AF311602 NM_178441	694378	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.941088	CTCF.p2:19:0.941
chr3	139847561	139847665	reg1007967.p1	10.220	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-193361	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-193595	+	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	-450785	-	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	549346	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	813154	+	TSC_hg19_v1_chr3_+_140770412 BC051354	922865	+	AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.89935	CTCF.p2:-10:0.899
chr11	125274892	125275005	reg1010429.p2	10.219	+	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	-240322	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	-240370	+	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	-293479	-	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	91193	-	TSC_hg19_v1_chr11_+_125439294 NM_001007277 NM_004879	164347	+	TSC_hg19_v1_chr11_+_125439332 AB209820	164377	+	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_001007277|EI24|9538|etoposide induced 2.4 mRNA##NM_004879|EI24|9538|etoposide induced 2.4 mRNA##AB209820|EI24|9538|etoposide induced 2.4 mRNA	0.544121	CTCF.p2:-1:0.544
chr7	27190529	27190652	reg1010110.p2	10.219	+	AB587586 BC069497 CU686852 BC104915 BC104917 NM_024014	-3211	-	AB587591 BT009744 CR542256 CR542277 DQ890593 DQ893761 BC013682 NM_019102	-7335	-	AB463747 M74297 BC126994 NM_002141	-20216	-	TSC_hg19_v1_chr7_-_27192203 DQ655986	1618	-	AB463748 TSC_hg19_v1_chr7_-_27196299 AJ005814 BC061916 AF026397 NM_006896	5655	-	AB463749 AM393527 BT006990 DQ892748 DQ895994 TSC_hg19_v1_chr7_-_27205095 U82759	14496	-	BC069497|HOXA6|3203|homeobox A6##BC104915|HOXA6|3203|homeobox A6##BC104917|HOXA6|3203|homeobox A6##NM_024014|HOXA6|3203|homeobox A6##BT009744|HOXA5|3202|homeobox A5##CR542256|HOXA5|3202|homeobox A5##CR542277|HOXA5|3202|homeobox A5##DQ890593|HOXA5|3202|homeobox A5##DQ893761|HOXA5|3202|homeobox A5##BC013682|HOXA5|3202|homeobox A5##NM_019102|HOXA5|3202|homeobox A5##M74297|HOXA4|3201|homeobox A4##BC126994|HOXA4|3201|homeobox A4##NM_002141|HOXA4|3201|homeobox A4##BC061916|HOXA7|3204|homeobox A7##AF026397|HOXA7|3204|homeobox A7##NM_006896|HOXA7|3204|homeobox A7##AM393527|HOXA9|3205|homeobox A9##BT006990|HOXA9|3205|homeobox A9##DQ892748|HOXA9|3205|homeobox A9##DQ895994|HOXA9|3205|homeobox A9##U82759|HOXA9|3205|homeobox A9	0.012296	
chr11	117821149	117821270	reg1010423.p1	10.218	+	BC018715 AK300283 AB048796 AB048797 BC114928 AY190317 AK027798 TSC_hg19_v1_chr11_-_117800150 NM_001077263 NM_001206789 NM_001206790 NM_001244995	-21092	-	NM_001164831	-73009	-	TSC_hg19_v1_chr11_-_117747623 AK289629 NM_001164832 NM_001164836 NM_001164837 NM_001204268 NM_001243598 NM_022003	-73528	-	TSC_hg19_v1_chr11_+_117857108 AK291645 AK301484 NM_001558 AK301260 AK316342 AK313049 AK301492	35881	+	TSC_hg19_v1_chr11_+_117857155 U00672 BC028082 AB590303 CU688390 DQ891031 DQ893720 AK316146 AB209626	36078	+	NM_001083947 NM_001173551 NM_001173552 NM_019894 AK304113 AK311290 TSC_hg19_v1_chr11_+_117947754	126534	+	BC018715|TMPRSS13|84000|transmembrane protease, serine 13##AK300283|TMPRSS13|84000|transmembrane protease, serine 13##AB048796|TMPRSS13|84000|transmembrane protease, serine 13##AB048797|TMPRSS13|84000|transmembrane protease, serine 13##BC114928|TMPRSS13|84000|transmembrane protease, serine 13##AY190317|TMPRSS13|84000|transmembrane protease, serine 13##AK027798|TMPRSS13|84000|transmembrane protease, serine 13##NM_001077263|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206789|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206790|TMPRSS13|84000|transmembrane protease, serine 13##NM_001244995|TMPRSS13|84000|transmembrane protease, serine 13##NM_001164831|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK289629|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164832|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164836|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164837|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001204268|FXYD6-FXYD2|100533181|FXYD6-FXYD2 readthrough##NM_001243598|FXYD6-FXYD2|100533181|FXYD6-FXYD2 readthrough##NM_022003|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK291645|IL10RA|3587|interleukin 10 receptor, alpha##AK301484|IL10RA|3587|interleukin 10 receptor, alpha##NM_001558|IL10RA|3587|interleukin 10 receptor, alpha##AK301260|IL10RA|3587|interleukin 10 receptor, alpha##AK316342|IL10RA|3587|interleukin 10 receptor, alpha##AK313049|IL10RA|3587|interleukin 10 receptor, alpha##AK301492|IL10RA|3587|interleukin 10 receptor, alpha##U00672|IL10RA|3587|interleukin 10 receptor, alpha##BC028082|IL10RA|3587|interleukin 10 receptor, alpha##DQ891031|IL10RA|3587|interleukin 10 receptor, alpha##DQ893720|IL10RA|3587|interleukin 10 receptor, alpha##AK316146|IL10RA|3587|interleukin 10 receptor, alpha##AB209626|IL10RA|3587|interleukin 10 receptor, alpha##NM_001083947|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173551|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173552|TMPRSS4|56649|transmembrane protease, serine 4##NM_019894|TMPRSS4|56649|transmembrane protease, serine 4##AK304113|TMPRSS4|56649|transmembrane protease, serine 4	0.057369	
chr1	11301885	11302028	reg1011149.p2	10.218	+	AB593027 AK313716 BC001881 NM_021146 AB593026 AY358301	-52573	+	AK024393 TSC_hg19_v1_chr1_-_11188945	-113082	-	TSC_hg19_v1_chr1_-_11159916 AB209236 AB527852 EU832630 EU832705 AK294058 AK296559 BC039901 BC008460 AK308778 X66113 L01457 BC028687 NM_001001998 NM_002685 BC073788	-142065	-	TSC_hg19_v1_chr1_-_11322572 L34075 U88966	20606	-	TSC_hg19_v1_chr1_-_11322588 AB209995	20632	-	TSC_hg19_v1_chr1_-_11322598 AK304273 AK302863	20642	-	AB593027|ANGPTL7|10218|angiopoietin-like 7##AK313716|ANGPTL7|10218|angiopoietin-like 7##BC001881|ANGPTL7|10218|angiopoietin-like 7##NM_021146|ANGPTL7|10218|angiopoietin-like 7##AB593026|ANGPTL7|10218|angiopoietin-like 7##AY358301|ANGPTL7|10218|angiopoietin-like 7##AB209236|EXOSC10|5394|exosome component 10##EU832630|EXOSC10|5394|exosome component 10##EU832705|EXOSC10|5394|exosome component 10##AK294058|EXOSC10|5394|exosome component 10##AK296559|EXOSC10|5394|exosome component 10##BC039901|EXOSC10|5394|exosome component 10##BC008460|EXOSC10|5394|exosome component 10##AK308778|EXOSC10|5394|exosome component 10##X66113|EXOSC10|5394|exosome component 10##L01457|EXOSC10|5394|exosome component 10##BC028687|EXOSC10|5394|exosome component 10##NM_001001998|EXOSC10|5394|exosome component 10##NM_002685|EXOSC10|5394|exosome component 10##BC073788|EXOSC10|5394|exosome component 10##L34075|MTOR|2475|mechanistic target of rapamycin (serine/threonine kinase)##U88966|MTOR|2475|mechanistic target of rapamycin (serine/threonine kinase)##AB209995|MTOR|2475|mechanistic target of rapamycin (serine/threonine kinase)##AK304273|MTOR|2475|mechanistic target of rapamycin (serine/threonine kinase)##AK302863|MTOR|2475|mechanistic target of rapamycin (serine/threonine kinase)	0.996011	CTCF.p2:-16:0.996
chr12	111840782	111840909	reg1007017.p1	10.218	+	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	-33935	-	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	-33999	-	BC151245 NM_015267 AB006631 AF271236	-368973	+	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	2904	+	AK126309 TSC_hg19_v1_chr12_-_111893987	53078	-	TSC_hg19_v1_chr12_-_112036257 AK095017	195430	-	BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3##AK095017|ATXN2|6311|ataxin 2	0.344091	CTCF.p2:-29:0.344
chr3	40358666	40358799	reg1011055.p1	10.218	+	TSC_hg19_v1_chr3_+_40351259 AK311922 AF064607 CR542223	-7391	+	TSC_hg19_v1_chr3_+_40351197 AF263452	-7526	+	NM_005875 TSC_hg19_v1_chr3_+_40351187 AK223448 BC006996 AF077052	-7552	+	NM_001248 AF034840 AF039917 AK313322	69979	+	TSC_hg19_v1_chr3_-_40494669 BC047546	135997	-	BC040602 TSC_hg19_v1_chr3_-_40498743	139999	-	AK311922|EIF1B|10289|eukaryotic translation initiation factor 1B##AF064607|EIF1B|10289|eukaryotic translation initiation factor 1B##CR542223|EIF1B|10289|eukaryotic translation initiation factor 1B##AF263452|EIF1B|10289|eukaryotic translation initiation factor 1B##NM_005875|EIF1B|10289|eukaryotic translation initiation factor 1B##AK223448|EIF1B|10289|eukaryotic translation initiation factor 1B##BC006996|EIF1B|10289|eukaryotic translation initiation factor 1B##AF077052|EIF1B|10289|eukaryotic translation initiation factor 1B##NM_001248|ENTPD3|956|ectonucleoside triphosphate diphosphohydrolase 3##AF034840|ENTPD3|956|ectonucleoside triphosphate diphosphohydrolase 3##AF039917|ENTPD3|956|ectonucleoside triphosphate diphosphohydrolase 3##AK313322|ENTPD3|956|ectonucleoside triphosphate diphosphohydrolase 3##BC047546|ENTPD3-AS1|285266|ENTPD3 antisense RNA 1 (non-protein coding)	0.9864	CTCF.p2:12:0.986
chr9	4988017	4988163	reg1012118.p1	10.218	+	TSC_hg19_v1_chr9_+_4985271 AF005216 NM_004972 AF058925	-2831	+	TSC_hg19_v1_chr9_+_4985085 AK292525	-3003	+	TSC_hg19_v1_chr9_+_4839769 EF553527	-148322	+	AF135824 HQ258002 AF156094 NM_007179 BC126473 BC126475	197523	-	BC026254 AK291543 L34838 NM_002195 CU693182	243372	+	HQ258745 NM_005059 NM_134441 X00948 BC126415 BC126419	316504	-	AF005216|JAK2|3717|Janus kinase 2##NM_004972|JAK2|3717|Janus kinase 2##AF058925|JAK2|3717|Janus kinase 2##AK292525|JAK2|3717|Janus kinase 2##EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF135824|INSL6|11172|insulin-like 6##HQ258002|INSL6|11172|insulin-like 6##AF156094|INSL6|11172|insulin-like 6##NM_007179|INSL6|11172|insulin-like 6##BC126473|INSL6|11172|insulin-like 6##BC126475|INSL6|11172|insulin-like 6##BC026254|INSL4|3641|insulin-like 4 (placenta)##AK291543|INSL4|3641|insulin-like 4 (placenta)##L34838|INSL4|3641|insulin-like 4 (placenta)##NM_002195|INSL4|3641|insulin-like 4 (placenta)##HQ258745|RLN2|6019|relaxin 2##NM_005059|RLN2|6019|relaxin 2##NM_134441|RLN2|6019|relaxin 2##X00948|RLN2|6019|relaxin 2##BC126415|RLN2|6019|relaxin 2##BC126419|RLN2|6019|relaxin 2	0.999396	CTCF.p2:11:0.999
chr14	68410725	68410863	reg1012574.p1	10.217	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-124274	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-127495	-	AK315462 NM_152443	-242192	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	848926	-	NM_001244698 NM_004926	849836	-	NM_001244701 AB528867	852190	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.651599	CTCF.p2:-28:0.652
chr2	232161892	232162001	reg1010829.p1	10.217	+	TSC_hg19_v1_chr2_+_232120778 AB055779	-41168	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-98552	+	AY219922 TSC_hg19_v1_chr2_+_232063378	-98568	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	98476	+	AK001314 TSC_hg19_v1_chr2_-_232326464	164483	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	167189	-	AY929062|ARMC9|80210|armadillo repeat containing 9##AY219922|ARMC9|80210|armadillo repeat containing 9##AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK001314|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin	0.064797	
chr19	5154301	5154397	reg1011468.p1	10.216	+	TSC_hg19_v1_chr19_+_5032899 CU687848	-121450	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-185176	+	NM_015015 TSC_hg19_v1_chr19_+_4969124	-185225	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	186445	-	AK098722 NM_181710 AK292251 BC017592	301077	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	468409	-	AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##NM_015015|KDM4B|23030|lysine (K)-specific demethylase 4B##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2	0.826003	CTCF.p2:-3:0.826
chr2	119640330	119640458	reg1011932.p1	10.215	+	NM_001426	-34636	-	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-794331	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-868661	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	59426	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	276010	-	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	340991	+	NM_001426|EN1|2019|engrailed homeobox 1##AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase	1.013794	CTCF.p2:-12:0.997
chr3	124714401	124714527	reg1009373.p1	10.215	+	AF286113 AB035807 AY358831 TSC_hg19_v1_chr3_-_124653596 NM_033049	-60881	-	TSC_hg19_v1_chr3_-_124606213 BC006541 NM_002213 X53002	-108253	-	TSC_hg19_v1_chr3_-_124605863 AB587397 DQ892778 DQ896025 M35011 AK315429 J05633	-108598	-	BC067235 TSC_hg19_v1_chr3_-_124732404	17928	-	AB384586 NM_020733 TSC_hg19_v1_chr3_-_124774842	60336	-	BC063528 TSC_hg19_v1_chr3_-_124842461	127991	-	AF286113|MUC13|56667|mucin 13, cell surface associated##AB035807|MUC13|56667|mucin 13, cell surface associated##AY358831|MUC13|56667|mucin 13, cell surface associated##NM_033049|MUC13|56667|mucin 13, cell surface associated##BC006541|ITGB5|3693|integrin, beta 5##NM_002213|ITGB5|3693|integrin, beta 5##X53002|ITGB5|3693|integrin, beta 5##DQ892778|ITGB5|3693|integrin, beta 5##DQ896025|ITGB5|3693|integrin, beta 5##M35011|ITGB5|3693|integrin, beta 5##AK315429|ITGB5|3693|integrin, beta 5##J05633|ITGB5|3693|integrin, beta 5##BC067235|HEG1|57493|HEG homolog 1 (zebrafish)##NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)##BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	0.97542	CTCF.p2:-13:0.975
chr11	76838295	76838387	reg1005932.p1	10.214	+	CU686775 BC069115 BC069365 NM_006189	-24457	+	TSC_hg19_v1_chr11_+_76778017 BC018123 NM_004055 AK128124 AK313132 AK310978 AK094150 AB209087	-60314	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	-92882	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	987	+	TSC_hg19_v1_chr11_+_76883833 BC023212	45507	+	AY313782 AY326450 NM_182833	160121	-	BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein##BC018123|CAPN5|726|calpain 5##NM_004055|CAPN5|726|calpain 5##AK128124|CAPN5|726|calpain 5##AK313132|CAPN5|726|calpain 5##AK310978|CAPN5|726|calpain 5##AK094150|CAPN5|726|calpain 5##AB209087|CAPN5|726|calpain 5##NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA##BC023212|MYO7A|4647|myosin VIIA##AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4	0.958646	CTCF.p2:6:0.959
chr6	133874941	133875066	reg1011661.p2	10.214	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	-312471	+	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	-312512	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	-739284	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	335251	+	TSC_hg19_v1_chr6_+_134210277 AF035718 AF047419 BC025697	335267	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	398361	+	BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)##AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21##AF035718|TCF21|6943|transcription factor 21##AF047419|TCF21|6943|transcription factor 21##BC025697|TCF21|6943|transcription factor 21##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1	0.983452	CTCF.p2:5:0.983
chr1	243186991	243187102	reg1011669.p1	10.213	+	AK098092 NM_152666	-499049	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	-574276	-	BC132986 BC132988 AF276659 BC127722 NM_001004343	-1024672	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	231310	-	TSC_hg19_v1_chr1_-_243418566 AK310003 BC050722	231526	-	TSC_hg19_v1_chr1_-_243418675 NM_001042404 NM_001042405 NM_014812	231645	-	AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa##AK310003|CEP170|9859|centrosomal protein 170kDa##BC050722|CEP170|9859|centrosomal protein 170kDa##NM_001042404|CEP170|9859|centrosomal protein 170kDa##NM_001042405|CEP170|9859|centrosomal protein 170kDa##NM_014812|CEP170|9859|centrosomal protein 170kDa	0.973166	CTCF.p2:7:0.973
chr10	73456613	73456725	reg1011461.p2	10.212	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	-299931	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-377623	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-377644	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	22923	-	AK074172 NM_001168390	40911	-	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	76637	-	BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54	0.815336	CTCF.p2:-10:0.815
chr12	101221816	101221935	reg1009691.p1	10.212	+	NM_178826 TSC_hg19_v1_chr12_+_101188522 AK091591 AX747079 AK316105 AK293810	-33321	+	TSC_hg19_v1_chr12_+_100967484 BC043366 NM_174942	-254386	+	TSC_hg19_v1_chr12_+_100967438 AK315189	-254444	+	AK313788 AF536216 AY081220 NM_145913	382124	-	TSC_hg19_v1_chr12_+_101673904 NM_014503 AK307934 AJ006778	452030	+	TSC_hg19_v1_chr12_-_101801573 AK311793 AK302911 AK299062 BC007000 BX537387 NM_001177	579668	-	NM_178826|ANO4|121601|anoctamin 4##AK091591|ANO4|121601|anoctamin 4##AK316105|ANO4|121601|anoctamin 4##AK293810|ANO4|121601|anoctamin 4##BC043366|GAS2L3|283431|growth arrest-specific 2 like 3##NM_174942|GAS2L3|283431|growth arrest-specific 2 like 3##AK315189|GAS2L3|283431|growth arrest-specific 2 like 3##AK313788|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AF536216|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AY081220|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_145913|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_014503|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK307934|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AJ006778|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK311793|ARL1|400|ADP-ribosylation factor-like 1##AK302911|ARL1|400|ADP-ribosylation factor-like 1##AK299062|ARL1|400|ADP-ribosylation factor-like 1##BC007000|ARL1|400|ADP-ribosylation factor-like 1##BX537387|ARL1|400|ADP-ribosylation factor-like 1##NM_001177|ARL1|400|ADP-ribosylation factor-like 1	0.27994	CTCF.p2:-11:0.280
chr16	1413541	1413664	reg1013299.p1	10.212	+	TSC_hg19_v1_chr16_+_1401951 BC014592 DQ890827 DQ893981 AF302786 CU677055 AY203933 BC131525	-11582	+	NM_032520 TSC_hg19_v1_chr16_+_1401931 AK312067	-11686	+	TSC_hg19_v1_chr16_-_1401856 BC011785 BC017325 BC013943 BC016699 NM_001001410	-11767	-	TSC_hg19_v1_chr16_-_1429645 BC000150 AK027013 NM_001193389 NM_023076	16063	-	TSC_hg19_v1_chr16_-_1464697 AM944365 BC011924 AK124977 NM_001037125 NM_001193388	51076	-	TSC_hg19_v1_chr16_-_1470746 BC073941 BC063715 BC023590 BC092497	57133	-	BC014592|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##DQ890827|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##DQ893981|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AF302786|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AY203933|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##BC131525|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##NM_032520|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AK312067|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##BC011785|C16orf42|115939|chromosome 16 open reading frame 42##BC017325|C16orf42|115939|chromosome 16 open reading frame 42##BC013943|C16orf42|115939|chromosome 16 open reading frame 42##BC016699|C16orf42|115939|chromosome 16 open reading frame 42##NM_001001410|C16orf42|115939|chromosome 16 open reading frame 42##BC000150|UNKL|64718|unkempt homolog (Drosophila)-like##AK027013|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001193389|UNKL|64718|unkempt homolog (Drosophila)-like##NM_023076|UNKL|64718|unkempt homolog (Drosophila)-like##AM944365|UNKL|64718|unkempt homolog (Drosophila)-like##BC011924|UNKL|64718|unkempt homolog (Drosophila)-like##AK124977|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001037125|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001193388|UNKL|64718|unkempt homolog (Drosophila)-like##BC023590|C16orf91|283951|chromosome 16 open reading frame 91##BC092497|C16orf91|283951|chromosome 16 open reading frame 91	0.846215	CTCF.p2:3:0.808
chr3	44037891	44038006	reg1010705.p1	10.212	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-305527	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-374435	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-374510	-	AK093476 AX748152 NM_001145030	245429	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	341682	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	341999	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.060443	
chr7	31822162	31822292	reg1012559.p1	10.212	+	NM_001145123 NM_006658	-95597	+	AK128026 NM_194300	-265250	+	AK055238 AF248954 NM_022728	-441705	-	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	288278	-	AK094180 NM_001191059 U40371 NM_005020	288784	-	NM_001191058	516155	-	NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129##AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191058|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	0.661807	CTCF.p2:-11:0.662
chr10	59098982	59099130	reg1010855.p2	10.210	+	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	-978030	-	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	-978042	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	-1740282	+	TSC_hg19_v1_chr10_-_60027655 BC016612 BC065709 NM_152230	928605	-	BC005962 TSC_hg19_v1_chr10_+_60028929 NM_018464 BC059168 AF220049 BC008474 BC007043 AY960578 AK312017	929890	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	995780	+	AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##BC016612|IPMK|253430|inositol polyphosphate multikinase##BC065709|IPMK|253430|inositol polyphosphate multikinase##NM_152230|IPMK|253430|inositol polyphosphate multikinase##BC005962|CISD1|55847|CDGSH iron sulfur domain 1##NM_018464|CISD1|55847|CDGSH iron sulfur domain 1##BC059168|CISD1|55847|CDGSH iron sulfur domain 1##AF220049|CISD1|55847|CDGSH iron sulfur domain 1##BC008474|CISD1|55847|CDGSH iron sulfur domain 1##BC007043|CISD1|55847|CDGSH iron sulfur domain 1##AY960578|CISD1|55847|CDGSH iron sulfur domain 1##AK312017|CISD1|55847|CDGSH iron sulfur domain 1##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	0.108445	
chr1	62054461	62054578	reg1011156.p2	10.210	+	TSC_hg19_v1_chr1_+_61924622 AK096483	-129827	+	TSC_hg19_v1_chr1_+_61869699 AK024964	-184796	+	TSC_hg19_v1_chr1_+_61548292 AB037860 NM_001134673 NM_005595 AK299356 BC022264 CU692518 DQ893250 DQ896579	-506461	+	AK311444 AK311705 TSC_hg19_v1_chr1_-_62190802 CU688668	136252	-	TSC_hg19_v1_chr1_-_62190806 BC048995 BC029486	136300	-	AF353990 NM_032027	136575	-	AK096483|NFIA|4774|nuclear factor I/A##AK024964|NFIA|4774|nuclear factor I/A##AB037860|NFIA|4774|nuclear factor I/A##NM_001134673|NFIA|4774|nuclear factor I/A##NM_005595|NFIA|4774|nuclear factor I/A##AK299356|NFIA|4774|nuclear factor I/A##BC022264|NFIA|4774|nuclear factor I/A##DQ893250|NFIA|4774|nuclear factor I/A##DQ896579|NFIA|4774|nuclear factor I/A##AK311444|TM2D1|83941|TM2 domain containing 1##AK311705|TM2D1|83941|TM2 domain containing 1##BC048995|TM2D1|83941|TM2 domain containing 1##BC029486|TM2D1|83941|TM2 domain containing 1##AF353990|TM2D1|83941|TM2 domain containing 1##NM_032027|TM2D1|83941|TM2 domain containing 1	0.998099	CTCF.p2:5:0.998
chr2	225987729	225987816	reg1009012.p2	10.210	+	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	-80424	-	TSC_hg19_v1_chr2_-_225811768 EU236710	-176018	-	TSC_hg19_v1_chr2_-_225450116 NM_003590	-537652	-	NM_020864 BC131727 AB040919	277873	+	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	1675707	-	TSC_hg19_v1_chr2_-_227664534 S62539	1676727	-	AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##EU236710|DOCK10|55619|dedicator of cytokinesis 10##NM_003590|CUL3|8452|cullin 3##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##S62539|IRS1|3667|insulin receptor substrate 1	0.187202	
chr3	59299215	59299333	reg1010155.p1	10.210	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-263514	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-263533	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-263566	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	1937816	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	2247937	+	BC047734 TSC_hg19_v1_chr3_+_61547294	2248012	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.023019	
chr4	111430123	111430244	reg1012475.p1	10.210	+	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	-32810	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	-310398	-	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-596136	+	AK313987 TSC_hg19_v1_chr4_-_111543909	113727	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	114092	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	127986	-	AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK313987|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2	0.097002	
chr20	43496345	43496450	reg1011297.p1	10.209	+	AK126807 BC104191 BC104190 BC112985 AY326954 NM_001205317 NM_182970	-57468	-	AF257081 NM_022358 BC093874 BC143282 AF294350 AF294351 AF336342	-121878	+	TSC_hg19_v1_chr20_+_43344010 AK313853 BC064379 AF083500 AF074604 AY358915 CU687868	-152380	+	TSC_hg19_v1_chr20_+_43514345 NM_003404 NM_139323 AK292717 BC001359	17947	+	TSC_hg19_v1_chr20_+_43514390 AL834170 AB209759	17973	+	TSC_hg19_v1_chr20_+_43538705 NM_001124756 EU190483	42321	+	AK126807|RIMS4|140730|regulating synaptic membrane exocytosis 4##BC104191|RIMS4|140730|regulating synaptic membrane exocytosis 4##BC104190|RIMS4|140730|regulating synaptic membrane exocytosis 4##BC112985|RIMS4|140730|regulating synaptic membrane exocytosis 4##AY326954|RIMS4|140730|regulating synaptic membrane exocytosis 4##NM_001205317|RIMS4|140730|regulating synaptic membrane exocytosis 4##NM_182970|RIMS4|140730|regulating synaptic membrane exocytosis 4##AF257081|KCNK15|60598|potassium channel, subfamily K, member 15##NM_022358|KCNK15|60598|potassium channel, subfamily K, member 15##BC093874|KCNK15|60598|potassium channel, subfamily K, member 15##BC143282|KCNK15|60598|potassium channel, subfamily K, member 15##AF294350|KCNK15|60598|potassium channel, subfamily K, member 15##AF294351|KCNK15|60598|potassium channel, subfamily K, member 15##AF336342|KCNK15|60598|potassium channel, subfamily K, member 15##AK313853|WISP2|8839|WNT1 inducible signaling pathway protein 2##BC064379|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF083500|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF074604|WISP2|8839|WNT1 inducible signaling pathway protein 2##AY358915|WISP2|8839|WNT1 inducible signaling pathway protein 2##NM_003404|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##NM_139323|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AK292717|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##BC001359|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AL834170|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AB209759|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##NM_001124756|PABPC1L|80336|poly(A) binding protein, cytoplasmic 1-like##EU190483|PABPC1L|80336|poly(A) binding protein, cytoplasmic 1-like	0.971534	CTCF.p2:-1:0.972
chr3	62651645	62651746	reg1010087.p1	10.209	+	AK290464 NM_018008	-292506	-	BC017772 NM_020685	-346300	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	-346989	+	TSC_hg19_v1_chr3_-_62860565 AB587314	208937	-	AF458662 AB593079 TSC_hg19_v1_chr3_-_62861056 AB032947 NM_003716 NM_183393 NM_183394	209349	-	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	612222	+	AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##AF458662|CADPS|8618|Ca++-dependent secretion activator##AB593079|CADPS|8618|Ca++-dependent secretion activator##AB032947|CADPS|8618|Ca++-dependent secretion activator##NM_003716|CADPS|8618|Ca++-dependent secretion activator##NM_183393|CADPS|8618|Ca++-dependent secretion activator##NM_183394|CADPS|8618|Ca++-dependent secretion activator##NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin	0.0	
chr6	45890637	45890767	reg1012541.p1	10.208	+	TSC_hg19_v1_chr6_+_45390379 L40992	-500290	+	TSC_hg19_v1_chr6_+_45390325 BC108919 BC108920	-500397	+	TSC_hg19_v1_chr6_+_45389825 NM_004348	-500837	+	DQ892643 DQ895881 CU690236 AF176920 AK314416 AK075163 TSC_hg19_v1_chr6_-_45983598 AK075144 AF216941 AK222544 BC035968 DQ679794 AK223130 NM_016929	92775	-	AY032602 AK097048 NM_001114086	157329	-	NM_014936 TSC_hg19_v1_chr6_+_46097726 BC018054	207012	+	L40992|RUNX2|860|runt-related transcription factor 2##BC108919|RUNX2|860|runt-related transcription factor 2##BC108920|RUNX2|860|runt-related transcription factor 2##NM_004348|RUNX2|860|runt-related transcription factor 2##DQ892643|CLIC5|53405|chloride intracellular channel 5##DQ895881|CLIC5|53405|chloride intracellular channel 5##AF176920|CLIC5|53405|chloride intracellular channel 5##AK314416|CLIC5|53405|chloride intracellular channel 5##AK075163|CLIC5|53405|chloride intracellular channel 5##AK075144|CLIC5|53405|chloride intracellular channel 5##AF216941|CLIC5|53405|chloride intracellular channel 5##AK222544|CLIC5|53405|chloride intracellular channel 5##BC035968|CLIC5|53405|chloride intracellular channel 5##DQ679794|CLIC5|53405|chloride intracellular channel 5##AK223130|CLIC5|53405|chloride intracellular channel 5##NM_016929|CLIC5|53405|chloride intracellular channel 5##AY032602|CLIC5|53405|chloride intracellular channel 5##AK097048|CLIC5|53405|chloride intracellular channel 5##NM_001114086|CLIC5|53405|chloride intracellular channel 5##NM_014936|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##BC018054|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)	0.797781	CTCF.p2:6:0.798
chr1	17988194	17988304	reg1010012.p1	10.206	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	-43384	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	-81234	+	TSC_hg19_v1_chr1_+_17866365 AB046846 NM_018125 AK311076	-121889	+	AK057339 NM_030812 BC028909 U20582	93597	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	446028	+	NM_152375	819174	+	AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AB046846|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_018125|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK311076|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##NM_152375|KLHDC7A|127707|kelch domain containing 7A	0.990008	CTCF.p2:2:0.990
chr15	100244703	100244833	reg1010676.p2	10.206	+	NM_001130928 BC053871 CU680614 AB384809 AM392739 AM393856 EU446488 CU691046	-71499	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	-138533	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	-138574	+	TSC_hg19_v1_chr15_-_100273591 BC084545 AK124852	28798	-	BX640928 TSC_hg19_v1_chr15_-_100273612	28836	-	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	28866	-	NM_001130928|MEF2A|4205|myocyte enhancer factor 2A##BC053871|MEF2A|4205|myocyte enhancer factor 2A##AM392739|MEF2A|4205|myocyte enhancer factor 2A##AM393856|MEF2A|4205|myocyte enhancer factor 2A##EU446488|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC084545|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK124852|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4	0.996711	CTCF.p2:-3:0.997
chr15	38172860	38173010	reg1012054.p1	10.206	+	TSC_hg19_v1_chr15_-_37393466 BC050431 NM_001220482 NM_002399 BC001516 BC001844 BC007202 AK300247	-779493	-	TSC_hg19_v1_chr15_-_37392751 AK056216 NM_170674 NM_170675 NM_170676 NM_170677	-780379	-	TSC_hg19_v1_chr15_-_37392322 AK226072	-780604	-	BC029221 NM_152453	54521	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	371460	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	372087	+	BC050431|MEIS2|4212|Meis homeobox 2##NM_001220482|MEIS2|4212|Meis homeobox 2##NM_002399|MEIS2|4212|Meis homeobox 2##BC001516|MEIS2|4212|Meis homeobox 2##BC001844|MEIS2|4212|Meis homeobox 2##BC007202|MEIS2|4212|Meis homeobox 2##AK300247|MEIS2|4212|Meis homeobox 2##AK056216|MEIS2|4212|Meis homeobox 2##NM_170674|MEIS2|4212|Meis homeobox 2##NM_170675|MEIS2|4212|Meis homeobox 2##NM_170676|MEIS2|4212|Meis homeobox 2##NM_170677|MEIS2|4212|Meis homeobox 2##AK226072|MEIS2|4212|Meis homeobox 2##BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1	0.923987	CTCF.p2:13:0.924
chr19	38478132	38478237	reg1011332.p1	10.206	+	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	-80272	+	TSC_hg19_v1_chr19_+_38397847 NM_015073	-80327	+	AK302913 AY026504 AK128826 NM_031951	-80910	-	AB463560 GQ358728 BC125152 BC125153 U43843 AK308563 NM_001135155 NM_004647	236651	-	BC021191 TSC_hg19_v1_chr19_-_38720320 NM_001135156	242132	-	TSC_hg19_v1_chr19_-_38720336 AK297581	242150	-	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##AK302913|WDR87|83889|WD repeat domain 87##AY026504|WDR87|83889|WD repeat domain 87##AK128826|WDR87|83889|WD repeat domain 87##NM_031951|WDR87|83889|WD repeat domain 87##GQ358728|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125152|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125153|DPF1|8193|D4, zinc and double PHD fingers family 1##U43843|DPF1|8193|D4, zinc and double PHD fingers family 1##AK308563|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135155|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_004647|DPF1|8193|D4, zinc and double PHD fingers family 1##BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1##AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1	0.78855	CTCF.p2:-9:0.740
chr4	156292747	156292886	reg1012317.p1	10.206	+	NM_000910 U42766	-163036	+	NM_144979 AK302720 BC028588	-590354	+	TSC_hg19_v1_chr4_+_155665151 AY546085 AY546086 NM_004744 AF071510	-627600	+	TSC_hg19_v1_chr4_-_156297959 BC022852	5139	-	TSC_hg19_v1_chr4_-_156297990 AK301075 BC146864 BC128540 BC128541 BC056683	5192	-	TSC_hg19_v1_chr4_-_156298108 AK024812 AY690636 NM_001039580	5295	-	NM_000910|NPY2R|4887|neuropeptide Y receptor Y2##U42766|NPY2R|4887|neuropeptide Y receptor Y2##NM_144979|RBM46|166863|RNA binding motif protein 46##AK302720|RBM46|166863|RNA binding motif protein 46##BC028588|RBM46|166863|RNA binding motif protein 46##AY546085|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AY546086|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_004744|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AF071510|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##BC022852|MAP9|79884|microtubule-associated protein 9##AK301075|MAP9|79884|microtubule-associated protein 9##BC146864|MAP9|79884|microtubule-associated protein 9##BC128540|MAP9|79884|microtubule-associated protein 9##BC128541|MAP9|79884|microtubule-associated protein 9##BC056683|MAP9|79884|microtubule-associated protein 9##AK024812|MAP9|79884|microtubule-associated protein 9##AY690636|MAP9|79884|microtubule-associated protein 9##NM_001039580|MAP9|79884|microtubule-associated protein 9	0.985838	CTCF.p2:4:0.986
chr6	117100875	117101019	reg1013684.p1	10.206	+	TSC_hg19_v1_chr6_-_117086883 BC038997 NM_001085480	-14086	-	TSC_hg19_v1_chr6_+_117002373 NM_002269 AK314206 BC047409	-98580	+	TSC_hg19_v1_chr6_-_116989930 BX537872 BC016879 AK054582 AK307523 NM_145062	-111011	-	AF502962 NM_148963 AY435125 AY435126 AY435127	49260	-	BC039248 NM_173560	97428	+	AY056583 NM_153453 TSC_hg19_v1_chr6_+_117586720 AJ578053 NM_182645 BC100798 BC100799 BC118545 BC118622 BC069316 AK096878	485864	+	BC038997|FAM162B|221303|family with sequence similarity 162, member B##NM_001085480|FAM162B|221303|family with sequence similarity 162, member B##NM_002269|KPNA5|3841|karyopherin alpha 5 (importin alpha 6)##AK314206|KPNA5|3841|karyopherin alpha 5 (importin alpha 6)##BC047409|KPNA5|3841|karyopherin alpha 5 (importin alpha 6)##BX537872|ZUFSP|221302|zinc finger with UFM1-specific peptidase domain##BC016879|ZUFSP|221302|zinc finger with UFM1-specific peptidase domain##AK054582|ZUFSP|221302|zinc finger with UFM1-specific peptidase domain##AK307523|ZUFSP|221302|zinc finger with UFM1-specific peptidase domain##NM_145062|ZUFSP|221302|zinc finger with UFM1-specific peptidase domain##AF502962|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##NM_148963|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435125|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435126|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435127|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##BC039248|RFX6|222546|regulatory factor X, 6##NM_173560|RFX6|222546|regulatory factor X, 6##AY056583|VGLL2|245806|vestigial like 2 (Drosophila)##NM_153453|VGLL2|245806|vestigial like 2 (Drosophila)##AJ578053|VGLL2|245806|vestigial like 2 (Drosophila)##NM_182645|VGLL2|245806|vestigial like 2 (Drosophila)##BC100798|VGLL2|245806|vestigial like 2 (Drosophila)##BC100799|VGLL2|245806|vestigial like 2 (Drosophila)##BC118545|VGLL2|245806|vestigial like 2 (Drosophila)##BC118622|VGLL2|245806|vestigial like 2 (Drosophila)##BC069316|VGLL2|245806|vestigial like 2 (Drosophila)##AK096878|VGLL2|245806|vestigial like 2 (Drosophila)	0.999698	CTCF.p2:-5:1.000
chr14	93598926	93599040	reg1011457.p1	10.205	+	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	-16769	-	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	-17392	-	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-209386	+	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	52217	-	TSC_hg19_v1_chr14_-_93651243 NM_022151	52262	-	AK315522 TSC_hg19_v1_chr14_-_93651261	52285	-	BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1##NM_022151|MOAP1|64112|modulator of apoptosis 1##AK315522|MOAP1|64112|modulator of apoptosis 1	0.048396	
chr22	32603002	32603120	reg1013019.p1	10.205	+	BC051910 NM_001159545	-2344	-	AK055999 NM_001098527	-3598	-	CR456563 NM_001159546	-4545	-	NM_014227 AB527216 AJ133127	48256	-	BC031689 NM_006604	147810	+	AJ010232 NM_001098535 BC069753 CR456564 AB463217 CU013164 CU013452 CU689230 EU446766 EU831788 EU831866	150937	+	BC051910|RFPL2|10739|ret finger protein-like 2##NM_001159545|RFPL2|10739|ret finger protein-like 2##AK055999|RFPL2|10739|ret finger protein-like 2##NM_001098527|RFPL2|10739|ret finger protein-like 2##CR456563|RFPL2|10739|ret finger protein-like 2##NM_001159546|RFPL2|10739|ret finger protein-like 2##NM_014227|SLC5A4|6527|solute carrier family 5 (low affinity glucose cotransporter), member 4##AJ133127|SLC5A4|6527|solute carrier family 5 (low affinity glucose cotransporter), member 4##BC031689|RFPL3|10738|ret finger protein-like 3##NM_006604|RFPL3|10738|ret finger protein-like 3##AJ010232|RFPL3|10738|ret finger protein-like 3##NM_001098535|RFPL3|10738|ret finger protein-like 3##BC069753|RFPL3|10738|ret finger protein-like 3##CR456564|RFPL3|10738|ret finger protein-like 3##CU013164|RFPL3|10738|ret finger protein-like 3##CU013452|RFPL3|10738|ret finger protein-like 3##EU446766|RFPL3|10738|ret finger protein-like 3##EU831788|RFPL3|10738|ret finger protein-like 3##EU831866|RFPL3|10738|ret finger protein-like 3	1.042485	CTCF.p2:2:0.999
chr22	35550999	35551117	reg1010584.p1	10.205	+	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	-88909	+	AJ007583 AB011181 NM_004737 NM_133642	-1234688	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-2096703	-	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	102418	+	AK293694 NM_001135729	144209	+	TSC_hg19_v1_chr22_+_35695855 NM_001135730 NM_001135732 NM_005488 AK026576 AJ006973 AY358980	144773	+	CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)##NM_001135730|TOM1|10043|target of myb1 (chicken)##NM_001135732|TOM1|10043|target of myb1 (chicken)##NM_005488|TOM1|10043|target of myb1 (chicken)##AK026576|TOM1|10043|target of myb1 (chicken)##AJ006973|TOM1|10043|target of myb1 (chicken)##AY358980|TOM1|10043|target of myb1 (chicken)	0.958398	CTCF.p2:5:0.958
chr3	24306286	24306431	reg1013747.p1	10.205	+	TSC_hg19_v1_chr3_+_23987516 AK301925 NM_001145425	-318796	+	TSC_hg19_v1_chr3_+_23986776 NM_005126 D16815 AK313464 BC045613 BC070035	-319543	+	NM_001253380 AY347528 L25899 AB529129 BT019672 CU677095 CU687134	-347086	+	GQ456948 GQ456949 GQ869479 GQ919288 AY286469 AY286468 AY286465 AY286471 TSC_hg19_v1_chr3_-_24536294 AY286467 AY286466 AK096628 M26747 NM_000461 NM_001128176 NM_001128177 NM_001252634 X04707	229886	-	AY286470 TSC_hg19_v1_chr3_-_24536493	230119	-	TSC_hg19_v1_chr3_+_25469751 AF157483 NM_016152	1163401	+	AK301925|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001145425|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001253380|RPL15|6138|ribosomal protein L15##AY347528|RPL15|6138|ribosomal protein L15##L25899|RPL15|6138|ribosomal protein L15##BT019672|RPL15|6138|ribosomal protein L15##GQ456948|THRB|7068|thyroid hormone receptor, beta##GQ456949|THRB|7068|thyroid hormone receptor, beta##GQ869479|THRB|7068|thyroid hormone receptor, beta##GQ919288|THRB|7068|thyroid hormone receptor, beta##AY286469|THRB|7068|thyroid hormone receptor, beta##AY286468|THRB|7068|thyroid hormone receptor, beta##AY286465|THRB|7068|thyroid hormone receptor, beta##AY286471|THRB|7068|thyroid hormone receptor, beta##AY286467|THRB|7068|thyroid hormone receptor, beta##AY286466|THRB|7068|thyroid hormone receptor, beta##AK096628|THRB|7068|thyroid hormone receptor, beta##M26747|THRB|7068|thyroid hormone receptor, beta##NM_000461|THRB|7068|thyroid hormone receptor, beta##NM_001128176|THRB|7068|thyroid hormone receptor, beta##NM_001128177|THRB|7068|thyroid hormone receptor, beta##NM_001252634|THRB|7068|thyroid hormone receptor, beta##X04707|THRB|7068|thyroid hormone receptor, beta##AY286470|THRB|7068|thyroid hormone receptor, beta##AF157483|RARB|5915|retinoic acid receptor, beta##NM_016152|RARB|5915|retinoic acid receptor, beta	1.285829	CTCF.p2:6:0.292	CTCF.p2:-15:0.994
chr5	139224108	139224224	reg1011599.p1	10.205	+	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	-48760	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	-163774	+	AF151029 TSC_hg19_v1_chr5_+_139060229	-163954	+	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	198562	-	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	198679	-	TSC_hg19_v1_chr5_+_139493703 M96684 NM_005859 BC110574 BC110594 BC036087 AB464679 BT019388	269561	+	AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2##M96684|PURA|5813|purine-rich element binding protein A##NM_005859|PURA|5813|purine-rich element binding protein A##BC110574|PURA|5813|purine-rich element binding protein A##BC110594|PURA|5813|purine-rich element binding protein A##BC036087|PURA|5813|purine-rich element binding protein A##BT019388|PURA|5813|purine-rich element binding protein A	1.013763	CTCF.p2:4:0.998
chr8	3394098	3394217	reg1010400.p2	10.205	+	AK128880 TSC_hg19_v1_chr8_-_2585966	-808175	-	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-1400955	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-1441249	+	AY017307 TSC_hg19_v1_chr8_-_4852228	1458068	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	1458137	-	TSC_hg19_v1_chr8_-_6264053 BC036625	2869900	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	1.02613	CTCF.p2:13:0.994
chr19	38893720	38893848	reg1010710.p2	10.204	+	TSC_hg19_v1_chr19_+_38893785 BC117258 BC143830 BC171747 NM_174905 HQ258606 BC036482	-4	+	BC151136 DQ323927 DQ323928 NM_001039616 NM_001042522	-12896	+	AF538037 AF538035 AF538036 BC035008 NM_152657 AK057356	-15116	-	TSC_hg19_v1_chr19_+_38893817 BC100033	29	+	TSC_hg19_v1_chr19_+_38893839 BC080606 AK128745	117	+	AF448437 BC146669 BC150202 BC142721 BC151216 TSC_hg19_v1_chr19_-_38916860 AX721071 AY048119 AY048120 AY048121 FJ768677 FJ768678 FJ768679 FJ768680 FJ768681 FJ768682 NM_001146202 NM_001146203 NM_001146204 NM_001146205 NM_001146206 NM_001146207 NM_170604	23088	-	BC117258|FAM98C|147965|family with sequence similarity 98, member C##BC143830|FAM98C|147965|family with sequence similarity 98, member C##BC171747|FAM98C|147965|family with sequence similarity 98, member C##NM_174905|FAM98C|147965|family with sequence similarity 98, member C##HQ258606|FAM98C|147965|family with sequence similarity 98, member C##BC036482|FAM98C|147965|family with sequence similarity 98, member C##BC151136|SPRED3|399473|sprouty-related, EVH1 domain containing 3##DQ323927|SPRED3|399473|sprouty-related, EVH1 domain containing 3##DQ323928|SPRED3|399473|sprouty-related, EVH1 domain containing 3##NM_001039616|SPRED3|399473|sprouty-related, EVH1 domain containing 3##NM_001042522|SPRED3|399473|sprouty-related, EVH1 domain containing 3##AF538037|GGN|199720|gametogenetin##AF538035|GGN|199720|gametogenetin##AF538036|GGN|199720|gametogenetin##BC035008|GGN|199720|gametogenetin##NM_152657|GGN|199720|gametogenetin##AK057356|GGN|199720|gametogenetin##BC100033|FAM98C|147965|family with sequence similarity 98, member C##BC080606|FAM98C|147965|family with sequence similarity 98, member C##AK128745|FAM98C|147965|family with sequence similarity 98, member C##AF448437|RASGRP4|115727|RAS guanyl releasing protein 4##BC146669|RASGRP4|115727|RAS guanyl releasing protein 4##BC150202|RASGRP4|115727|RAS guanyl releasing protein 4##BC142721|RASGRP4|115727|RAS guanyl releasing protein 4##BC151216|RASGRP4|115727|RAS guanyl releasing protein 4##AY048119|RASGRP4|115727|RAS guanyl releasing protein 4##AY048120|RASGRP4|115727|RAS guanyl releasing protein 4##AY048121|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768677|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768678|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768679|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768680|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768681|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768682|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146202|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146203|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146204|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146205|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146206|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146207|RASGRP4|115727|RAS guanyl releasing protein 4##NM_170604|RASGRP4|115727|RAS guanyl releasing protein 4	0.985415	CTCF.p2:-15:0.985
chr1	98516739	98516876	reg1010838.p1	10.204	+	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	-130201	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	-130248	-	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	-130318	-	TSC_hg19_v1_chr1_+_99127278 NM_015976 NM_152238 AK025031 AK223229 AL049989 AF121857 AK298211 BC018105 BC010349	610501	+	BC040174 AK295688 BC140086 BC143086 AY634620 BC136350 BC144000 AY574039 FJ472844 NM_001010861 NM_001037317	953505	-	AF541281 NM_001166252 NM_014839 AB007924 AK056665 AY304518 AB384482 BC042963 TSC_hg19_v1_chr1_+_99730047 AK291369 AK297417	1213143	+	NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##NM_015976|SNX7|51375|sorting nexin 7##NM_152238|SNX7|51375|sorting nexin 7##AK025031|SNX7|51375|sorting nexin 7##AK223229|SNX7|51375|sorting nexin 7##AL049989|SNX7|51375|sorting nexin 7##AF121857|SNX7|51375|sorting nexin 7##AK298211|SNX7|51375|sorting nexin 7##BC018105|SNX7|51375|sorting nexin 7##BC010349|SNX7|51375|sorting nexin 7##BC040174|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AK295688|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC140086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC143086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY634620|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC136350|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC144000|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY574039|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##FJ472844|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001010861|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001037317|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	0.981812	CTCF.p2:8:0.982
chr4	165653114	165653240	reg1011106.p2	10.204	+	AK289711 NM_001166373	-348771	-	NM_012403	-534315	-	AB463878 AK000675 AK301408 NM_017923	-1118462	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	224925	+	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	224974	+	BC089393 NM_001012414	245640	-	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61	0.557501	CTCF.p2:13:0.558
chr5	129107169	129107283	reg1010121.p2	10.204	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-311173	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-676801	+	TSC_hg19_v1_chr5_+_128301169 BX537383 NM_014031 NM_001017372 AK313456 AL833117	-806029	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	133261	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	1393705	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	1393764	-	AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##BX537383|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_014031|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_001017372|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AK313456|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AL833117|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1	0.975348	CTCF.p2:-2:0.975
chr7	102398789	102398905	reg1010463.p1	10.204	+	TSC_hg19_v1_chr7_+_102389473 NM_001145268 NM_001145269 BC029175 AK297455 AK298753 AK054745 DQ893359 DQ896678	-9357	+	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	-86727	-	AK302217 NM_001031618 NM_001166339	-108076	+	NM_001031692 NM_005824 TSC_hg19_v1_chr7_+_102553446 AK226021 AK225701 U32907 AK290305 BC027903 AY358889	154585	+	AK097537 NM_145032	316167	-	AY359238 AY359239 AK095387 BC031285 BC026121 NM_001111038	316382	-	NM_001145268|FAM185A|222234|family with sequence similarity 185, member A##NM_001145269|FAM185A|222234|family with sequence similarity 185, member A##BC029175|FAM185A|222234|family with sequence similarity 185, member A##AK297455|FAM185A|222234|family with sequence similarity 185, member A##AK298753|FAM185A|222234|family with sequence similarity 185, member A##AK054745|FAM185A|222234|family with sequence similarity 185, member A##DQ893359|FAM185A|222234|family with sequence similarity 185, member A##DQ896678|FAM185A|222234|family with sequence similarity 185, member A##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##NM_001031692|LRRC17|10234|leucine rich repeat containing 17##NM_005824|LRRC17|10234|leucine rich repeat containing 17##AK226021|LRRC17|10234|leucine rich repeat containing 17##AK225701|LRRC17|10234|leucine rich repeat containing 17##U32907|LRRC17|10234|leucine rich repeat containing 17##AK290305|LRRC17|10234|leucine rich repeat containing 17##BC027903|LRRC17|10234|leucine rich repeat containing 17##AY358889|LRRC17|10234|leucine rich repeat containing 17##AK097537|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_145032|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY359238|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY359239|FBXL13|222235|F-box and leucine-rich repeat protein 13##AK095387|FBXL13|222235|F-box and leucine-rich repeat protein 13##BC031285|FBXL13|222235|F-box and leucine-rich repeat protein 13##BC026121|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_001111038|FBXL13|222235|F-box and leucine-rich repeat protein 13	0.999198	CTCF.p2:-8:0.999
chr11	1974888	1974991	reg1010485.p2	10.203	+	BC027710 TSC_hg19_v1_chr11_+_1968589	-6350	+	TSC_hg19_v1_chr11_+_1968573 NM_021134 U26596 Z49254 AK313805 AK128774	-6398	+	NM_001042780 NM_001042781 NM_001042782 NM_006757 BC062430 TSC_hg19_v1_chr11_+_1940935 BX640689 BC050446 AK056968	-34052	+	BC106079 BC010185 TSC_hg19_v1_chr11_-_2016854	41859	-	BC009853 AK123560 BC013067 TSC_hg19_v1_chr11_-_2017955	42950	-	BC006831 BC007513 TSC_hg19_v1_chr11_-_2018387 BC053637 BC023213	43436	-	BC027710|MRPL23|6150|mitochondrial ribosomal protein L23##NM_021134|MRPL23|6150|mitochondrial ribosomal protein L23##U26596|MRPL23|6150|mitochondrial ribosomal protein L23##Z49254|MRPL23|6150|mitochondrial ribosomal protein L23##AK313805|MRPL23|6150|mitochondrial ribosomal protein L23##AK128774|MRPL23|6150|mitochondrial ribosomal protein L23##NM_001042780|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042781|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042782|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_006757|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC062430|TNNT3|7140|troponin T type 3 (skeletal, fast)##BX640689|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC050446|TNNT3|7140|troponin T type 3 (skeletal, fast)##AK056968|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC010185|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC009853|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AK123560|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC013067|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC006831|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC007513|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC053637|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC023213|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)	0.999277	CTCF.p2:2:0.999
chr5	163123433	163123539	reg1010252.p1	10.203	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-190843	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-193198	+	NM_001142556 NM_001142557 NM_012484 NM_012485 BC057235 AK313603 BC030505 TSC_hg19_v1_chr5_+_162887665 AK302975 BC006984 AK303616 BC070281 BC017793 U29343 AF032862 BC108904 BC108905 BC107869 AK290577	-235891	+	HE578282 HE578283 NM_001122679	3588356	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	4595335	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	4789988	+	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001142556|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001142557|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012484|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012485|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC057235|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK313603|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC030505|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK302975|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK303616|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC070281|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC017793|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##U29343|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AF032862|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108904|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108905|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC107869|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK290577|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.096437	
chr9	36450268	36450391	reg1012126.p1	10.203	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-49154	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-49432	-	AL136817 BC033786 NM_022781 NM_194329	-50076	-	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	122595	+	TSC_hg19_v1_chr9_-_37034361 NM_016734	584087	-	TSC_hg19_v1_chr9_+_37079908 AK091718	629577	+	NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##AL136817|RNF38|152006|ring finger protein 38##BC033786|RNF38|152006|ring finger protein 38##NM_022781|RNF38|152006|ring finger protein 38##NM_194329|RNF38|152006|ring finger protein 38##AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.997746	CTCF.p2:-2:0.519	CTCF.p2:-3:0.478
chr4	86068765	86068911	reg1012048.p1	10.202	+	NM_014991	-181295	-	NM_001263 U65887	-564745	+	NM_006168	-649452	-	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	327505	+	TSC_hg19_v1_chr4_+_86699850 NM_001042669	631010	+	BC098580 TSC_hg19_v1_chr4_+_86699865 AK098193	631060	+	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_006168|NKX6-1|4825|NK6 homeobox 1##NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24##NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24##BC098580|ARHGAP24|83478|Rho GTPase activating protein 24##AK098193|ARHGAP24|83478|Rho GTPase activating protein 24	0.984596	CTCF.p2:-16:0.985
chr7	155172937	155173061	reg1010233.p1	10.202	+	AK291675 TSC_hg19_v1_chr7_+_155089667	-83355	+	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	-83477	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	-310422	+	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	77765	+	BC105732 BC105733 BC105734 BC107598 NM_001103176 AK094445	153548	-	TSC_hg19_v1_chr7_-_155437101 AK091942 AX747269	264091	-	AK291675|INSIG1|3638|insulin induced gene 1##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2##BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)##BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)##NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)##AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)	0.132328	
chr1	20539463	20539597	reg1010628.p2	10.201	+	BC047428 NM_152376 BX648631 AK058158 TSC_hg19_v1_chr1_+_20512591	-26946	+	NM_001105572	-37844	-	TSC_hg19_v1_chr1_+_20480706 BC041651	-58767	+	NM_001039500 AK125833	77890	+	AY204901 TSC_hg19_v1_chr1_-_20812323	272768	-	NM_018584 TSC_hg19_v1_chr1_-_20812743	273251	-	BC047428|UBXN10|127733|UBX domain protein 10##NM_152376|UBXN10|127733|UBX domain protein 10##BX648631|UBXN10|127733|UBX domain protein 10##AK058158|UBXN10|127733|UBX domain protein 10##NM_001105572|PLA2G2C|391013|phospholipase A2, group IIC##NM_001039500|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AK125833|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AY204901|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##NM_018584|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1	0.998348	CTCF.p2:-13:0.998
chr1	32405552	32405647	reg1007117.p1	10.201	+	TSC_hg19_v1_chr1_-_32403992 NM_080391	-1602	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	-1668	-	NM_001195100 NM_001195101	-20341	-	TSC_hg19_v1_chr1_+_32479463 AK293369 AK091346 AX746925 AK312916 AK303218 BC000717 BC019109 M88108 NM_006559 BC010132 AB590354 DQ895323 U78971	73899	+	TSC_hg19_v1_chr1_+_32538502 AK023331 NM_018056	132905	+	AL136695 TSC_hg19_v1_chr1_+_32538539 AK001177 BC004364 AK296653 AK298766 AK300293	132975	+	NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK023331|TMEM39B|55116|transmembrane protein 39B##NM_018056|TMEM39B|55116|transmembrane protein 39B##AL136695|TMEM39B|55116|transmembrane protein 39B##AK001177|TMEM39B|55116|transmembrane protein 39B##BC004364|TMEM39B|55116|transmembrane protein 39B##AK296653|TMEM39B|55116|transmembrane protein 39B##AK298766|TMEM39B|55116|transmembrane protein 39B##AK300293|TMEM39B|55116|transmembrane protein 39B	0.823344	CTCF.p2:5:0.804
chr5	162774694	162774830	reg1012262.p1	10.201	+	NM_000816 NM_198903 NM_198904 BC052926 BC036030 X15376 BC059389 BC069348 BC074795 AK315200 AK299640	-1279917	+	NM_001127648 AB590312 DQ890915	-1497003	+	NM_001127647	-1497371	+	TSC_hg19_v1_chr5_+_162864606 AK316234 NM_004060 NM_199246 AK297190 AK312913 BC007093 BX538035 D78341 L49504 BC000196	89859	+	AB528197 AM392736 AM393438 FJ215684 AK094647 TSC_hg19_v1_chr5_-_162887097	112316	-	AK311957 TSC_hg19_v1_chr5_-_162887119 BC017934 BX538290 NM_145266	112371	-	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127647|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK316234|CCNG1|900|cyclin G1##NM_004060|CCNG1|900|cyclin G1##NM_199246|CCNG1|900|cyclin G1##AK297190|CCNG1|900|cyclin G1##AK312913|CCNG1|900|cyclin G1##BC007093|CCNG1|900|cyclin G1##BX538035|CCNG1|900|cyclin G1##D78341|CCNG1|900|cyclin G1##L49504|CCNG1|900|cyclin G1##BC000196|CCNG1|900|cyclin G1##AM392736|NUDCD2|134492|NudC domain containing 2##AM393438|NUDCD2|134492|NudC domain containing 2##FJ215684|NUDCD2|134492|NudC domain containing 2##AK311957|NUDCD2|134492|NudC domain containing 2##BC017934|NUDCD2|134492|NudC domain containing 2##BX538290|NUDCD2|134492|NudC domain containing 2##NM_145266|NUDCD2|134492|NudC domain containing 2	0.995833	CTCF.p2:20:0.996
chrX	149885409	149885505	reg1009306.p1	10.200	+	TSC_hg19_v1_chrX_+_149861868 BC032947 NM_003828 AK226109 AF057354 AJ224979	-23536	+	AL832715 AK297021 BC030779 TSC_hg19_v1_chrX_+_149737092	-148353	+	TSC_hg19_v1_chrX_+_149737070 NM_000252 AK291710 U46024 AK297057 AK304036	-148411	+	AM393605 AM393786 DQ891322 DQ894506 AK290200 TSC_hg19_v1_chrX_-_150067096 AK293244 AY078165 AY078166 AY078167 AK125020 AK291375 BC025729 AK295217	181636	-	TSC_hg19_v1_chrX_-_150067149 BC030536 AY358837 AL136580 NM_001184808 NM_001242614 NM_031462 NM_134445 NM_134446	181750	-	TSC_hg19_v1_chrX_+_150151807 BX537505 NM_005342 Y10043 BC070482	266350	+	BC032947|MTMR1|8776|myotubularin related protein 1##NM_003828|MTMR1|8776|myotubularin related protein 1##AK226109|MTMR1|8776|myotubularin related protein 1##AF057354|MTMR1|8776|myotubularin related protein 1##AJ224979|MTMR1|8776|myotubularin related protein 1##AL832715|MTM1|4534|myotubularin 1##AK297021|MTM1|4534|myotubularin 1##BC030779|MTM1|4534|myotubularin 1##NM_000252|MTM1|4534|myotubularin 1##AK291710|MTM1|4534|myotubularin 1##U46024|MTM1|4534|myotubularin 1##AK297057|MTM1|4534|myotubularin 1##AK304036|MTM1|4534|myotubularin 1##AM393605|CD99L2|83692|CD99 molecule-like 2##AM393786|CD99L2|83692|CD99 molecule-like 2##DQ891322|CD99L2|83692|CD99 molecule-like 2##DQ894506|CD99L2|83692|CD99 molecule-like 2##AK290200|CD99L2|83692|CD99 molecule-like 2##AK293244|CD99L2|83692|CD99 molecule-like 2##AY078165|CD99L2|83692|CD99 molecule-like 2##AY078166|CD99L2|83692|CD99 molecule-like 2##AY078167|CD99L2|83692|CD99 molecule-like 2##AK125020|CD99L2|83692|CD99 molecule-like 2##AK291375|CD99L2|83692|CD99 molecule-like 2##BC025729|CD99L2|83692|CD99 molecule-like 2##AK295217|CD99L2|83692|CD99 molecule-like 2##BC030536|CD99L2|83692|CD99 molecule-like 2##AY358837|CD99L2|83692|CD99 molecule-like 2##AL136580|CD99L2|83692|CD99 molecule-like 2##NM_001184808|CD99L2|83692|CD99 molecule-like 2##NM_001242614|CD99L2|83692|CD99 molecule-like 2##NM_031462|CD99L2|83692|CD99 molecule-like 2##NM_134445|CD99L2|83692|CD99 molecule-like 2##NM_134446|CD99L2|83692|CD99 molecule-like 2##BX537505|HMGB3|3149|high mobility group box 3##NM_005342|HMGB3|3149|high mobility group box 3##Y10043|HMGB3|3149|high mobility group box 3##BC070482|HMGB3|3149|high mobility group box 3	0.886693	CTCF.p2:36:0.887
chr17	37886805	37886938	reg1008923.p2	10.199	+	TSC_hg19_v1_chr17_-_37886786 NM_032339 AY508814	-72	-	TSC_hg19_v1_chr17_-_37886762 BC063395 AF490253 BC006006 BC106016	-117	-	AK313683 TSC_hg19_v1_chr17_+_37856310 BC080193 AF177761 BC167147	-30489	+	NM_005310 TSC_hg19_v1_chr17_+_37894190 AK314368	7307	+	TSC_hg19_v1_chr17_+_37894212 AK222849 AK027729 AK222870 D43772	7345	+	AK294620 NM_001030002 BC006535 TSC_hg19_v1_chr17_+_37894600	7708	+	NM_032339|MIEN1|84299|migration and invasion enhancer 1##AY508814|MIEN1|84299|migration and invasion enhancer 1##AF490253|MIEN1|84299|migration and invasion enhancer 1##BC006006|MIEN1|84299|migration and invasion enhancer 1##BC106016|MIEN1|84299|migration and invasion enhancer 1##AK313683|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##BC080193|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##AF177761|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##BC167147|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##NM_005310|GRB7|2886|growth factor receptor-bound protein 7##AK314368|GRB7|2886|growth factor receptor-bound protein 7##AK222849|GRB7|2886|growth factor receptor-bound protein 7##AK027729|GRB7|2886|growth factor receptor-bound protein 7##AK222870|GRB7|2886|growth factor receptor-bound protein 7##D43772|GRB7|2886|growth factor receptor-bound protein 7##AK294620|GRB7|2886|growth factor receptor-bound protein 7##NM_001030002|GRB7|2886|growth factor receptor-bound protein 7##BC006535|GRB7|2886|growth factor receptor-bound protein 7	0.729976	CTCF.p2:-9:0.730
chr6	27094931	27095075	reg1012377.p1	10.199	+	TSC_hg19_v1_chr6_-_26659967 NM_001242797 NM_001242798 NM_001242799 NM_024639	-435051	-	TSC_hg19_v1_chr6_+_26597203 NM_013375 BC066313 BC048812 AB027258 AB463399 CU688138 CU690582 EU446795	-497796	+	TSC_hg19_v1_chr6_+_26538630 NM_006353 AK311841 BC001282	-556373	+	AB591038 BC014312 TSC_hg19_v1_chr6_-_27100575 NM_021058 AK311849	5562	-	TSC_hg19_v1_chr6_+_27100821 AK312124 NM_021064 L19778 BC067782 BC016677 AB590259 DQ891024 DQ894204 DQ894286	5814	+	BC016336 BC075806 AB590709 BC066250 BC067496 BC067497 HQ257982 NM_003495	12070	+	NM_001242797|ZNF322|79692|zinc finger protein 322##NM_001242798|ZNF322|79692|zinc finger protein 322##NM_001242799|ZNF322|79692|zinc finger protein 322##NM_024639|ZNF322|79692|zinc finger protein 322##NM_013375|ABT1|29777|activator of basal transcription 1##BC066313|ABT1|29777|activator of basal transcription 1##BC048812|ABT1|29777|activator of basal transcription 1##AB027258|ABT1|29777|activator of basal transcription 1##EU446795|ABT1|29777|activator of basal transcription 1##NM_006353|HMGN4|10473|high mobility group nucleosomal binding domain 4##AK311841|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC001282|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC014312|HIST1H2BJ|8970|histone cluster 1, H2bj##NM_021058|HIST1H2BJ|8970|histone cluster 1, H2bj##AK311849|HIST1H2BJ|8970|histone cluster 1, H2bj##AK312124|HIST1H2AG|8969|histone cluster 1, H2ag##NM_021064|HIST1H2AG|8969|histone cluster 1, H2ag##L19778|HIST1H2AG|8969|histone cluster 1, H2ag##BC067782|HIST1H2AG|8969|histone cluster 1, H2ag##BC016677|HIST1H2AG|8969|histone cluster 1, H2ag##DQ891024|HIST1H2AG|8969|histone cluster 1, H2ag##DQ894204|HIST1H2AG|8969|histone cluster 1, H2ag##DQ894286|HIST1H2AG|8969|histone cluster 1, H2ag##BC016336|HIST1H4I|8294|histone cluster 1, H4i##BC075806|HIST1H4I|8294|histone cluster 1, H4i##BC066250|HIST1H4I|8294|histone cluster 1, H4i##BC067496|HIST1H4I|8294|histone cluster 1, H4i##BC067497|HIST1H4I|8294|histone cluster 1, H4i##HQ257982|HIST2H4B|554313|histone cluster 2, H4b##NM_003495|HIST1H4I|8294|histone cluster 1, H4i	1.608748	CTCF.p2:13:0.996	CTCF.p2:-61:0.613
chr17	27444278	27444385	reg1010169.p2	10.198	+	AK054958 NM_004740	-41705	-	TSC_hg19_v1_chr17_-_27401793 BC131561 BC047669	-42473	-	BC058075 TSC_hg19_v1_chr17_-_27401707	-42682	-	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	23080	-	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	63019	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	129546	+	AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC131561|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC047669|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC058075|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1	0.999896	CTCF.p2:7:1.000
chr2	212320089	212320209	reg1013915.p1	10.198	+	AK316425 NM_001122634 AK302778 AY317138	-862064	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-898760	+	NM_001122633 AB208800	-977731	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	1083166	-	AK301503 AF130863 NM_016260	1694906	-	BC028936 NM_001079526	1696183	-	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	0.994079	CTCF.p2:4:0.994
chr3	32185737	32185858	reg1010099.p2	10.198	+	TSC_hg19_v1_chr3_+_32148151 BC028726 AK292808 AB385275	-37629	+	TSC_hg19_v1_chr3_+_32148004 NM_015141 D42047	-37776	+	AF392451 NM_001174060 NM_017784	-162508	-	TSC_hg19_v1_chr3_+_32280171 AF474370 AY598783 NM_178868	94368	+	TSC_hg19_v1_chr3_+_32280215 BC041390	94422	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	247372	+	BC028726|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AK292808|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##NM_015141|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##D42047|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AF392451|OSBPL10|114884|oxysterol binding protein-like 10##NM_001174060|OSBPL10|114884|oxysterol binding protein-like 10##NM_017784|OSBPL10|114884|oxysterol binding protein-like 10##AF474370|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AY598783|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##NM_178868|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7	0.99903	CTCF.p2:0:0.999
chr5	133476281	133476392	reg1010555.p1	10.198	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	-24975	+	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	-25817	+	AK095989 NM_003374	-135513	-	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	36287	-	TSC_hg19_v1_chr5_-_133512642 Z47087 BC020798 NM_006930 NM_170679	36346	-	AB451240 AB451365 CR457417 AB385080 X12646 TSC_hg19_v1_chr5_-_133561733 J03804	85308	-	NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1##Z47087|SKP1|6500|S-phase kinase-associated protein 1##BC020798|SKP1|6500|S-phase kinase-associated protein 1##NM_006930|SKP1|6500|S-phase kinase-associated protein 1##NM_170679|SKP1|6500|S-phase kinase-associated protein 1##AB451240|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AB451365|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##CR457417|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##X12646|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##J03804|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme	0.9981	CTCF.p2:11:0.998
chr2	95652272	95652375	reg1010980.p1	10.197	+	AK097438 BC021716 NM_144705 AK296678 CU692394	-115073	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3804320	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-5440605	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	39159	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	135219	-	AB049940 TSC_hg19_v1_chr2_-_95787749 BC014172 NM_031902	135389	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5##AB049940|MRPS5|64969|mitochondrial ribosomal protein S5##BC014172|MRPS5|64969|mitochondrial ribosomal protein S5##NM_031902|MRPS5|64969|mitochondrial ribosomal protein S5	0.174467	
chrX	10157790	10157929	reg1011454.p1	10.197	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	-32805	+	BC098455 NM_015691	-174066	+	NM_001195081	-222462	+	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	377700	-	AF035360 NM_001193277 AY112903	387045	-	AF230976 AF230977 Y13667 AK226104 AK315095 BC053626 AK291215 TSC_hg19_v1_chrX_-_10588583 AY112901 AK297205 NM_000381 NM_033289	430706	-	NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112903|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF230976|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF230977|MID1|4281|midline 1 (Opitz/BBB syndrome)##Y13667|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK226104|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK315095|MID1|4281|midline 1 (Opitz/BBB syndrome)##BC053626|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK291215|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112901|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK297205|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_000381|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_033289|MID1|4281|midline 1 (Opitz/BBB syndrome)	0.714834	CTCF.p2:-25:0.715
chr10	131687515	131687634	reg1011899.p1	10.196	+	TSC_hg19_v1_chr10_+_131265507 BC000824	-422060	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	-422103	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-1763046	-	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	74479	-	TSC_hg19_v1_chr10_-_131762539 AK097335	74951	-	TSC_hg19_v1_chr10_-_131909090 EU250747 AK094118	221507	-	BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3##AK097335|EBF3|253738|early B-cell factor 3##EU250747|LOC387723|387723|uncharacterized LOC387723##AK094118|LOC387723|387723|uncharacterized LOC387723	0.031329	
chr20	16682095	16682214	reg1010077.p2	10.196	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	-128141	-	BC018687 NM_001033087	-1504651	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-2363898	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	28509	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	46867	+	BC040546 NM_001201528	524597	+	AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin##BC040546|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201528|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	0.818269	CTCF.p2:-5:0.803
chr6	7615844	7615960	reg1010437.p1	10.196	+	TSC_hg19_v1_chr6_+_7590453 AL832462 NM_152551 AK292409 AK056796 BC054008 BC114631 BC114630 BC062458	-25443	+	TSC_hg19_v1_chr6_+_7579692 J05211	-36165	+	TSC_hg19_v1_chr6_+_7541904 AB621818 AK304182	-73972	+	TSC_hg19_v1_chr6_+_7726328 AK300628	110490	+	NM_001718 M60315 BC096084 BC096085 BC099624 BC099625 BC111763 BC112352 BC113018 BC113019 BC128031	111148	+	TSC_hg19_v1_chr6_-_7910300 AK315598 NM_001145549	294427	-	AL832462|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##NM_152551|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##AK292409|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##AK056796|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC054008|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC114631|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC114630|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC062458|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##J05211|DSP|1832|desmoplakin##AK304182|DSP|1832|desmoplakin##AK300628|BMP6|654|bone morphogenetic protein 6##NM_001718|BMP6|654|bone morphogenetic protein 6##M60315|BMP6|654|bone morphogenetic protein 6##BC096084|BMP6|654|bone morphogenetic protein 6##BC096085|BMP6|654|bone morphogenetic protein 6##BC099624|BMP6|654|bone morphogenetic protein 6##BC099625|BMP6|654|bone morphogenetic protein 6##BC111763|BMP6|654|bone morphogenetic protein 6##BC112352|BMP6|654|bone morphogenetic protein 6##BC113018|BMP6|654|bone morphogenetic protein 6##BC113019|BMP6|654|bone morphogenetic protein 6##BC128031|BMP6|654|bone morphogenetic protein 6##AK315598|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##NM_001145549|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)	0.948259	CTCF.p2:-6:0.948
chr9	131124531	131124657	reg1011285.p1	10.196	+	BC009959 TSC_hg19_v1_chr9_+_131102955 AK314681	-21627	+	TSC_hg19_v1_chr9_+_131102833 AK290222 NM_005094 BC065003	-21771	+	EU216421 TSC_hg19_v1_chr9_+_131085114 AK126646 EU216422 BC011895 AK301333 AB528109 AM392657 EU216423	-39430	+	NM_001135947 NM_030914 TSC_hg19_v1_chr9_+_131133630	9020	+	TSC_hg19_v1_chr9_+_131133650 BC003581 AK001880 AK097029 AK300877 BC011620	9062	+	TSC_hg19_v1_chr9_+_131182704 NM_016174	58130	+	BC009959|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##AK314681|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##AK290222|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##NM_005094|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##BC065003|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##EU216421|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##AK126646|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##EU216422|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##BC011895|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##AK301333|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##AM392657|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##EU216423|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##NM_001135947|URM1|81605|ubiquitin related modifier 1##NM_030914|URM1|81605|ubiquitin related modifier 1##BC003581|URM1|81605|ubiquitin related modifier 1##AK001880|URM1|81605|ubiquitin related modifier 1##AK097029|URM1|81605|ubiquitin related modifier 1##AK300877|URM1|81605|ubiquitin related modifier 1##BC011620|URM1|81605|ubiquitin related modifier 1##NM_016174|CERCAM|51148|cerebral endothelial cell adhesion molecule	0.105561	
chr12	39315024	39315121	reg1008442.p1	10.195	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	-15689	-	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-604447	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-5139599	+	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	521927	-	AK314254 NM_005164	698770	-	BC038754 NM_001031748 BC048120 AK097445	704923	+	AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40	0.989444	CTCF.p2:-4:0.989
chr14	21575117	21575252	reg1013254.p1	10.195	+	TSC_hg19_v1_chr14_-_21572798 NM_001102454	-2359	-	AK056849 TSC_hg19_v1_chr14_-_21572428	-2783	-	AK225811 AK290700 NM_001101672	-8064	-	NM_001004731 BC137304 BC137305	49018	-	M16342 BC108658 BX247992 BC089438 BC008364 TSC_hg19_v1_chr14_-_21737587 BC003394 BC071943 BX247961 M29063 AB209527 AK223517 BC066932 AK298906 AK312382 D28382 AK297482 AK299923 AK312338 BC103758 AK292619 BC007052 BC008423 AL833432 BC092433 AK225032 AK302213 NM_001077442 NM_001077443 NM_004500 NM_031314	162387	-	AJ417067 NM_020366	180951	+	NM_001102454|ZNF219|51222|zinc finger protein 219##AK225811|ZNF219|51222|zinc finger protein 219##AK290700|ZNF219|51222|zinc finger protein 219##NM_001101672|ZNF219|51222|zinc finger protein 219##NM_001004731|OR5AU1|390445|olfactory receptor, family 5, subfamily AU, member 1##BC137304|OR5AU1|390445|olfactory receptor, family 5, subfamily AU, member 1##BC137305|OR5AU1|390445|olfactory receptor, family 5, subfamily AU, member 1##M16342|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC108658|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BX247992|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC089438|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC008364|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC003394|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC071943|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BX247961|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##M29063|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AB209527|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK223517|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC066932|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK298906|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK312382|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##D28382|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK297482|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK299923|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK312338|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC103758|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK292619|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC007052|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC008423|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AL833432|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC092433|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK225032|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK302213|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_001077442|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_001077443|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_004500|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_031314|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AJ417067|RPGRIP1|57096|retinitis pigmentosa GTPase regulator interacting protein 1##NM_020366|RPGRIP1|57096|retinitis pigmentosa GTPase regulator interacting protein 1	0.99394	CTCF.p2:11:0.994
chr14	34261998	34262106	reg1008983.p1	10.195	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-853562	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1463516	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-1715546	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	158097	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	669435	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	746833	-	AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein	0.999849	CTCF.p2:19:1.000
chr3	157250525	157250647	reg1010563.p2	10.195	+	BC078142 BC057999 NM_001167915 NM_001167916	-29198	-	BC111017 AB051479 NM_001167911 NM_001167912	-29455	-	AK027625 NM_024621	-33193	-	NM_001099777 NM_001130001 NM_001130002 NM_001243729 BC126187 BC126189 BC144066 BC029129 BC010062	10596	+	TSC_hg19_v1_chr3_-_157823531 AK309293	572953	-	HQ258019 AJ002367 TSC_hg19_v1_chr3_-_157823847 BC008829 NM_001163678 NM_003030 NM_006884	573297	-	BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AK027625|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_024621|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001099777|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130001|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130002|C3orf55|152078|chromosome 3 open reading frame 55##NM_001243729|C3orf55|152078|chromosome 3 open reading frame 55##BC126187|C3orf55|152078|chromosome 3 open reading frame 55##BC126189|C3orf55|152078|chromosome 3 open reading frame 55##BC144066|C3orf55|152078|chromosome 3 open reading frame 55##BC029129|C3orf55|152078|chromosome 3 open reading frame 55##BC010062|C3orf55|152078|chromosome 3 open reading frame 55##HQ258019|SHOX2|6474|short stature homeobox 2##AJ002367|SHOX2|6474|short stature homeobox 2##BC008829|SHOX2|6474|short stature homeobox 2##NM_001163678|SHOX2|6474|short stature homeobox 2##NM_003030|SHOX2|6474|short stature homeobox 2##NM_006884|SHOX2|6474|short stature homeobox 2	0.917264	CTCF.p2:-16:0.917
chr4	13658230	13658375	reg1012759.p1	10.195	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-28985	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-108888	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-112227	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	1345407	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	1345693	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	1345995	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.258805	CTCF.p2:-10:0.259
chr6	82750410	82750518	reg1011022.p2	10.195	+	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	-288053	-	AY740520 FJ211061 CU674334 CU675631 TSC_hg19_v1_chr6_-_82461975	-288543	-	TSC_hg19_v1_chr6_+_80816397 AK289977 BC040139 M55575 AB529112 BT020063 X52446	-1934027	+	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	206949	-	TSC_hg19_v1_chr6_-_82957441 NM_015525 DQ005633 DQ005634	207004	-	AK291170 NM_006670	322458	+	AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##AY740520|FAM46A|55603|family with sequence similarity 46, member A##AK289977|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC040139|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##M55575|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BT020063|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##X52446|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##NM_015525|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005633|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005634|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein	0.0	
chr12	14094794	14094937	reg1013193.p1	10.194	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-745136	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-745148	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-745227	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	38121	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	423770	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	443407	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.992805	CTCF.p2:15:0.993
chr1	46689271	46689377	reg1009145.p1	10.194	+	CR749700 AK056186 NM_001243766	-3355	-	AK057892 NM_001013615 TSC_hg19_v1_chr1_+_46669021 BC034422 AB463505	-20273	+	TSC_hg19_v1_chr1_-_46664112 BC001471 NM_017739	-25199	-	TSC_hg19_v1_chr1_+_46713362 NM_001142548 NM_003579	24044	+	TSC_hg19_v1_chr1_+_46713388 AK292611	24062	+	TSC_hg19_v1_chr1_+_46713434 AK297204	24115	+	CR749700|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##AK056186|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##NM_001243766|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##AK057892|C1orf190|541468|chromosome 1 open reading frame 190##NM_001013615|C1orf190|541468|chromosome 1 open reading frame 190##BC034422|C1orf190|541468|chromosome 1 open reading frame 190##BC001471|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##NM_017739|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##NM_001142548|RAD54L|8438|RAD54-like (S. cerevisiae)##NM_003579|RAD54L|8438|RAD54-like (S. cerevisiae)##AK292611|RAD54L|8438|RAD54-like (S. cerevisiae)##AK297204|RAD54L|8438|RAD54-like (S. cerevisiae)	0.997251	CTCF.p2:-3:0.997
chr14	52118739	52118860	reg1011734.p2	10.193	+	TSC_hg19_v1_chr14_+_52118627 BX161430 NM_152330 BC020521 AK315764 AK055545 BX647863	-169	+	AL833158 NM_001042481	-162945	+	NM_030755 AB048246 TSC_hg19_v1_chr14_+_51706980 AK302416 BC036460 BC016769 BC050366 AK075395 BC032834 AK303134 AL080080 BC056874 AY358640 AK312905 DQ891674 DQ894860 CU690352	-411850	+	NM_001243773 NM_001243774 NM_053064 AK092371	208277	+	TSC_hg19_v1_chr14_+_52327329 AK307171	208524	+	AK001024 AK311334 TSC_hg19_v1_chr14_+_52327363	208565	+	BX161430|FRMD6|122786|FERM domain containing 6##NM_152330|FRMD6|122786|FERM domain containing 6##BC020521|FRMD6|122786|FERM domain containing 6##AK315764|FRMD6|122786|FERM domain containing 6##AK055545|FRMD6|122786|FERM domain containing 6##BX647863|FRMD6|122786|FERM domain containing 6##AL833158|FRMD6|122786|FERM domain containing 6##NM_001042481|FRMD6|122786|FERM domain containing 6##NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1##AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1##BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1##BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1##BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1##AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1##BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1##AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1##AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1##BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1##AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1##AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1##NM_001243773|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_001243774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	0.977819	CTCF.p2:-1:0.978
chr15	69868455	69868580	reg1011103.p2	10.193	+	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-123296	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-161155	-	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	-161771	+	BC015421 TSC_hg19_v1_chr15_-_70341948	473392	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	521710	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	521726	-	NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.997861	CTCF.p2:-26:0.998
chr4	10624485	10624625	reg1011480.p1	10.193	+	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-165545	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-506019	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-506077	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	61846	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	805977	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2861396	-	BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr5	10690054	10690166	reg1009850.p2	10.193	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-125668	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-247958	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-248107	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	71149	-	TSC_hg19_v1_chr5_-_10761341 BC002726	71232	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	71289	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.144635	
chr7	155205489	155205604	reg1013125.p1	10.193	+	AK291675 TSC_hg19_v1_chr7_+_155089667	-115902	+	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	-116024	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	-342969	+	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	45218	+	BC105732 BC105733 BC105734 BC107598 NM_001103176 AK094445	121001	-	TSC_hg19_v1_chr7_-_155437101 AK091942 AX747269	231544	-	AK291675|INSIG1|3638|insulin induced gene 1##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2##BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)##BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)##NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)##AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)	0.09504	
chr7	68868327	68868419	reg1008870.p1	10.193	+	TSC_hg19_v1_chr7_+_66767656 BC026058	-2100716	+	TSC_hg19_v1_chr7_+_66767642 AK307290	-2100725	+	TSC_hg19_v1_chr7_+_66767639 AK023257 AK308931	-2100765	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	195463	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	195956	+	TSC_hg19_v1_chr7_+_69064580 BC011643	196215	+	BC026058|STAG3L4|64940|stromal antigen 3-like 4##AK307290|STAG3L4|64940|stromal antigen 3-like 4##AK023257|STAG3L4|64940|stromal antigen 3-like 4##AK308931|STAG3L4|64940|stromal antigen 3-like 4##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2	0.964324	CTCF.p2:-16:0.964
chr14	58539450	58539550	reg1009593.p1	10.191	+	NM_001206920	-206909	-	HQ258368 BC117405 BC143565 BC143566 BC143567 BC143568 AK307238 AK223127 AK001512 BC028060 NM_018168	-578997	-	TSC_hg19_v1_chr14_+_57857318 BC118589 BC122557	-682168	+	BC146861 BX161411 NM_001001872 AK292605 BX161448 TSC_hg19_v1_chr14_-_58618906	79356	-	TSC_hg19_v1_chr14_-_58618916 AK292513	79424	-	TSC_hg19_v1_chr14_+_58666880 NM_018477 AK000544 AF220190 AK222624 AK222702 BC005208 AK022534 AK315537 BC011997 DQ891294 DQ894478 AB529154 CU680156 BX248282	127384	+	NM_001206920|SLC35F4|341880|solute carrier family 35, member F4##HQ258368|C14orf105|55195|chromosome 14 open reading frame 105##BC117405|C14orf105|55195|chromosome 14 open reading frame 105##BC143565|C14orf105|55195|chromosome 14 open reading frame 105##BC143566|C14orf105|55195|chromosome 14 open reading frame 105##BC143567|C14orf105|55195|chromosome 14 open reading frame 105##BC143568|C14orf105|55195|chromosome 14 open reading frame 105##AK307238|C14orf105|55195|chromosome 14 open reading frame 105##AK223127|C14orf105|55195|chromosome 14 open reading frame 105##AK001512|C14orf105|55195|chromosome 14 open reading frame 105##BC028060|C14orf105|55195|chromosome 14 open reading frame 105##NM_018168|C14orf105|55195|chromosome 14 open reading frame 105##BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC146861|C14orf37|145407|chromosome 14 open reading frame 37##BX161411|C14orf37|145407|chromosome 14 open reading frame 37##NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37##AK292605|C14orf37|145407|chromosome 14 open reading frame 37##BX161448|C14orf37|145407|chromosome 14 open reading frame 37##AK292513|C14orf37|145407|chromosome 14 open reading frame 37##NM_018477|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK000544|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AF220190|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK222624|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK222702|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BC005208|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK022534|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK315537|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BC011997|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##DQ891294|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##DQ894478|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BX248282|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	0.044055	
chr3	51976179	51976304	reg1010781.p1	10.191	+	TSC_hg19_v1_chr3_-_51975920 DQ895802 EU176364 BC023662 AJ001340 BC009879 NM_004704 BC001113 BC010048 BC021032 AK313696	-300	-	AK131018 BC029595 BC034228 NM_152397	-38881	-	NM_001145059	-66642	-	TSC_hg19_v1_chr3_+_51976389 NM_001003931 NM_005485 Y16836 AB208803 AY126341 AF083068 AB529017	247	+	TSC_hg19_v1_chr3_+_51977304 BC014260 CU676947	1087	+	NM_080865 AB032600 BC026357	13121	+	DQ895802|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##EU176364|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC023662|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##AJ001340|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC009879|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##NM_004704|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC001113|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC010048|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC021032|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##AK313696|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##AK131018|IQCF1|132141|IQ motif containing F1##BC029595|IQCF1|132141|IQ motif containing F1##BC034228|IQCF1|132141|IQ motif containing F1##NM_152397|IQCF1|132141|IQ motif containing F1##NM_001145059|IQCF5|389124|IQ motif containing F5##NM_001003931|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##NM_005485|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##Y16836|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##AB208803|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##AY126341|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##AF083068|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##BC014260|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##NM_080865|GPR62|118442|G protein-coupled receptor 62##AB032600|GPR62|118442|G protein-coupled receptor 62##BC026357|GPR62|118442|G protein-coupled receptor 62	0.955864	CTCF.p2:-1:0.956
chr11	128987632	128987750	reg1010883.p2	10.190	+	AB018255 AY194287 TSC_hg19_v1_chr11_-_128894084 AB079856 NM_014715	-93630	-	NM_001195195 NM_001251964 NM_022112	-174398	-	AB527772 AY302135 NM_001195194 BC069399 BC069426	-179941	-	EF127492 NM_001142685	74401	-	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	258190	+	TSC_hg19_v1_chr11_+_129685744 AK098106 NM_138788 AK290283 AK292058	698053	+	AB018255|ARHGAP32|9743|Rho GTPase activating protein 32##AY194287|ARHGAP32|9743|Rho GTPase activating protein 32##AB079856|ARHGAP32|9743|Rho GTPase activating protein 32##NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001195195|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001251964|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_022112|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##AY302135|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001195194|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##BC069399|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##BC069426|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2##AK098106|TMEM45B|120224|transmembrane protein 45B##NM_138788|TMEM45B|120224|transmembrane protein 45B##AK290283|TMEM45B|120224|transmembrane protein 45B##AK292058|TMEM45B|120224|transmembrane protein 45B	0.950071	CTCF.p2:-13:0.950
chr11	58556010	58556123	reg1011987.p1	10.190	+	AF023466 BC009785 NM_005838 NM_201648	-56659	-	BC069167 NM_000614 BC068030 AK314118 BC074963 BC074964 CU686605 S72921	-165881	+	TSC_hg19_v1_chr11_+_58346697 AB056107 AB057443 CU690828	-209371	+	BC021682 NM_145016 BC016789	55922	-	NM_001220494 AK300479 BC008353	139071	+	AK091965 AX747281 DQ084381 NM_001220496 NM_080661 AK055818	154686	+	AF023466|GLYAT|10249|glycine-N-acyltransferase##BC009785|GLYAT|10249|glycine-N-acyltransferase##NM_005838|GLYAT|10249|glycine-N-acyltransferase##NM_201648|GLYAT|10249|glycine-N-acyltransferase##BC069167|CNTF|1270|ciliary neurotrophic factor##NM_000614|CNTF|1270|ciliary neurotrophic factor##BC068030|CNTF|1270|ciliary neurotrophic factor##AK314118|CNTF|1270|ciliary neurotrophic factor##BC074963|CNTF|1270|ciliary neurotrophic factor##BC074964|CNTF|1270|ciliary neurotrophic factor##S72921|CNTF|1270|ciliary neurotrophic factor##AB056107|ZFP91|80829|zinc finger protein 91 homolog (mouse)##AB057443|ZFP91-CNTF|386607|ZFP91-CNTF readthrough##BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK091965|GLYATL1|92292|glycine-N-acyltransferase-like 1##DQ084381|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220496|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_080661|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK055818|GLYATL1|92292|glycine-N-acyltransferase-like 1	0.931868	CTCF.p2:18:0.932
chr1	208267222	208267351	reg1011123.p1	10.190	+	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-182729	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-182903	-	BX640941 TSC_hg19_v1_chr1_-_208059392	-207963	-	TSC_hg19_v1_chr1_-_208417635 NM_025179	150363	-	AK091113 AX746785 NM_001104548	1334879	+	NM_020439 AK095713 AK289675 AF428261 BC032787	1489774	+	BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_025179|PLXNA2|5362|plexin A2##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	0.995987	CTCF.p2:8:0.996
chr12	57701666	57701782	reg1011793.p1	10.190	+	AB384552 TSC_hg19_v1_chr12_-_57693218	-8542	-	TSC_hg19_v1_chr12_-_57674254 X85326	-27447	-	AK300688 BC008069 AK057013 AK311513 NM_145064	-56788	-	NM_014925	2521	-	AB023219 AX775761 AX775763 TSC_hg19_v1_chr12_-_57824797	123088	-	TSC_hg19_v1_chr12_+_57828511 AK314849 BC020693 NM_005538 X82540 BC130324 BC130326 AB590801	126839	+	AK300688|STAC3|246329|SH3 and cysteine rich domain 3##BC008069|STAC3|246329|SH3 and cysteine rich domain 3##AK057013|STAC3|246329|SH3 and cysteine rich domain 3##AK311513|STAC3|246329|SH3 and cysteine rich domain 3##NM_145064|STAC3|246329|SH3 and cysteine rich domain 3##NM_014925|R3HDM2|22864|R3H domain containing 2##AB023219|R3HDM2|22864|R3H domain containing 2##AX775761|R3HDM2|22864|R3H domain containing 2##AX775763|R3HDM2|22864|R3H domain containing 2##AK314849|INHBC|3626|inhibin, beta C##BC020693|INHBC|3626|inhibin, beta C##NM_005538|INHBC|3626|inhibin, beta C##BC130324|INHBC|3626|inhibin, beta C##BC130326|INHBC|3626|inhibin, beta C	0.994571	CTCF.p2:-3:0.995
chr15	59430464	59430593	reg1010595.p1	10.190	+	TSC_hg19_v1_chr15_+_59397344 NM_004701 AK001404 AL080146 BC105086 BC105112 AF087910 AK222611 AB020981 AF002822 AB587333 AM393577 BT019458 CR533527	-33157	+	TSC_hg19_v1_chr15_+_59359061 AK095327	-71450	+	BX647259 TSC_hg19_v1_chr15_+_59280332 AK131304	-150249	+	AY642121 BC022034 AY009108 NM_033195 AK312777 AK058192	68524	+	AB290177 TSC_hg19_v1_chr15_-_59665055	234526	-	TSC_hg19_v1_chr15_-_59665065 AK291688	234538	-	NM_004701|CCNB2|9133|cyclin B2##AK001404|CCNB2|9133|cyclin B2##AL080146|CCNB2|9133|cyclin B2##BC105086|CCNB2|9133|cyclin B2##BC105112|CCNB2|9133|cyclin B2##AF087910|CCNB2|9133|cyclin B2##AK222611|CCNB2|9133|cyclin B2##AB020981|CCNB2|9133|cyclin B2##AF002822|CCNB2|9133|cyclin B2##AM393577|CCNB2|9133|cyclin B2##BT019458|CCNB2|9133|cyclin B2##CR533527|CCNB2|9133|cyclin B2##AK095327|RNF111|54778|ring finger protein 111##BX647259|RNF111|54778|ring finger protein 111##AK131304|RNF111|54778|ring finger protein 111##AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B##BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AB290177|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE	1.839219	CTCF.p2:1:0.990	CTCF.p2:77:0.850
chr12	8085890	8086048	reg1011358.p1	10.189	+	AK299037 AK316238 TSC_hg19_v1_chr12_-_8043786	-42201	-	AK126026 AK122783 TSC_hg19_v1_chr12_-_8025469 AK302881 AF481878 BC060766 AF481879 NM_153449	-60503	-	AK290896 TSC_hg19_v1_chr12_+_7942025 BC069807 BC098275 BC099704 EU446847 AY230262 AY578089	-143852	+	CR457413 CU691674 DQ891118 DQ894297 DQ894299 AB209607 BC039196 AK304509 AK298673 AK312386 M20681 TSC_hg19_v1_chr12_-_8088888 NM_006931	2797	-	TSC_hg19_v1_chr12_+_8185313 BC032608 NM_018416	99521	+	TSC_hg19_v1_chr12_-_8218956 U28488 AK290242 AK312458 BC020742 NM_004054 AK223388	132984	-	AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK126026|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK122783|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK302881|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AF481878|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##BC060766|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AF481879|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##NM_153449|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK290896|NANOG|79923|Nanog homeobox##BC069807|NANOG|79923|Nanog homeobox##BC098275|NANOG|79923|Nanog homeobox##BC099704|NANOG|79923|Nanog homeobox##EU446847|NANOG|79923|Nanog homeobox##AY230262|NANOG|79923|Nanog homeobox##AY578089|NANOG|79923|Nanog homeobox##CR457413|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ891118|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894297|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894299|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AB209607|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##BC039196|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK304509|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK298673|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK312386|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##M20681|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##NM_006931|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##NM_018416|FOXJ2|55810|forkhead box J2##U28488|C3AR1|719|complement component 3a receptor 1##AK290242|C3AR1|719|complement component 3a receptor 1##AK312458|C3AR1|719|complement component 3a receptor 1##BC020742|C3AR1|719|complement component 3a receptor 1##NM_004054|C3AR1|719|complement component 3a receptor 1##AK223388|C3AR1|719|complement component 3a receptor 1	0.9915	CTCF.p2:-31:0.992
chr15	40613226	40613327	reg1009862.p1	10.189	+	TSC_hg19_v1_chr15_-_40600137 AK291657 NM_004573	-13131	-	TSC_hg19_v1_chr15_-_40600085 BC009009	-13189	-	BC136467 M95678 TSC_hg19_v1_chr15_-_40600050	-13236	-	TSC_hg19_v1_chr15_-_40630272 BC140897 BC140902 AK126035	17026	-	TSC_hg19_v1_chr15_-_40633122 AK125329 NM_207380	19868	-	TSC_hg19_v1_chr15_+_40643233 NM_001145643 BC061640	29959	+	AK291657|PLCB2|5330|phospholipase C, beta 2##NM_004573|PLCB2|5330|phospholipase C, beta 2##BC009009|PLCB2|5330|phospholipase C, beta 2##BC136467|PLCB2|5330|phospholipase C, beta 2##M95678|PLCB2|5330|phospholipase C, beta 2##BC140897|C15orf52|388115|chromosome 15 open reading frame 52##BC140902|C15orf52|388115|chromosome 15 open reading frame 52##AK126035|C15orf52|388115|chromosome 15 open reading frame 52##AK125329|C15orf52|388115|chromosome 15 open reading frame 52##NM_207380|C15orf52|388115|chromosome 15 open reading frame 52##NM_001145643|PHGR1|644844|proline/histidine/glycine-rich 1##BC061640|PHGR1|644844|proline/histidine/glycine-rich 1	0.073813	
chr16	71345634	71345752	reg1010817.p2	10.189	+	BC034468 TSC_hg19_v1_chr16_-_71323306 AK226169 BX648660 AK315056 NM_001099642 AK123343 AF458590 NM_018348 BC035005	-22392	-	AK000289 TSC_hg19_v1_chr16_-_71318858	-26883	-	TSC_hg19_v1_chr16_-_71264605 BC028351 AK299016 AK299348 NM_001198542 NM_001198543	-81079	-	NM_001740 NM_007088 AK222495 AK222648 AK291096 TSC_hg19_v1_chr16_+_71392625	46928	+	TSC_hg19_v1_chr16_+_71392648 BC015484 X56667	46951	+	TSC_hg19_v1_chr16_-_71496127 AF507946 BC007256 NM_145911 BC048974 AK091039 AX746746 AK297130	150428	-	BC034468|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK226169|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BX648660|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK315056|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_001099642|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AF458590|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_018348|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BC035005|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK000289|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BC028351|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK299016|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK299348|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001198542|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001198543|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001740|CALB2|794|calbindin 2##NM_007088|CALB2|794|calbindin 2##AK222495|CALB2|794|calbindin 2##AK222648|CALB2|794|calbindin 2##AK291096|CALB2|794|calbindin 2##BC015484|CALB2|794|calbindin 2##X56667|CALB2|794|calbindin 2##AF507946|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC007256|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_145911|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC048974|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK091039|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK297130|ZNF23|7571|zinc finger protein 23 (KOX 16)	1.145526	CTCF.p2:1:0.996
chr20	10297412	10297553	reg1010936.p1	10.189	+	TSC_hg19_v1_chr20_-_10200139 AK124961	-97339	-	TSC_hg19_v1_chr20_+_10199575 NM_003081 NM_130811 AK094560 AK098347 D21267 AK223617 AK314359 AK289647 BC010647 BX647443 AK098767 L19760 L19761	-97955	+	NM_022096 NM_198798 AK097689 TSC_hg19_v1_chr20_+_10015744 BC022878 BC028189 BC011591	-281750	+	AF221993 NM_018848	115087	-	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	117357	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	118494	+	AK124961|LOC100131208|100131208|uncharacterized LOC100131208##NM_003081|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_130811|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK094560|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098347|SNAP25|6616|synaptosomal-associated protein, 25kDa##D21267|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK223617|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK314359|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK289647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BC010647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BX647443|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098767|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19760|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19761|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_022096|ANKRD5|63926|ankyrin repeat domain 5##NM_198798|ANKRD5|63926|ankyrin repeat domain 5##AK097689|ANKRD5|63926|ankyrin repeat domain 5##BC022878|ANKRD5|63926|ankyrin repeat domain 5##BC028189|ANKRD5|63926|ankyrin repeat domain 5##BC011591|ANKRD5|63926|ankyrin repeat domain 5##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94	0.998796	CTCF.p2:-1:0.999
chr3	49051643	49051750	reg1011143.p2	10.189	+	TSC_hg19_v1_chr3_+_49044855 AK296387 AF099100 AK001080 AK092079 AX747346 AK297090 AK309913 AK225653 BC113467 BC143486 BC143488 BC101707 BC002826 AK304117	-6805	+	AK295145 NM_018031 TSC_hg19_v1_chr3_+_49044739	-7080	+	BC060321 TSC_hg19_v1_chr3_+_49027877 CU680020 AK000269	-23836	+	TSC_hg19_v1_chr3_-_49056011 BC054493 CU691092 BC014099 GQ129423 GQ129424 BC047683 BC032440 AK093054 AK301352 AX747889 AK001358 NM_001009996	4275	-	NM_199074	6211	+	AK093294 AX748037 AK308273 AK093204 AX747989 NM_018114	6750	-	AK296387|WDR6|11180|WD repeat domain 6##AF099100|WDR6|11180|WD repeat domain 6##AK001080|WDR6|11180|WD repeat domain 6##AK092079|WDR6|11180|WD repeat domain 6##AK297090|WDR6|11180|WD repeat domain 6##AK309913|WDR6|11180|WD repeat domain 6##AK225653|WDR6|11180|WD repeat domain 6##BC113467|WDR6|11180|WD repeat domain 6##BC143486|WDR6|11180|WD repeat domain 6##BC143488|WDR6|11180|WD repeat domain 6##BC101707|WDR6|11180|WD repeat domain 6##BC002826|WDR6|11180|WD repeat domain 6##AK304117|WDR6|11180|WD repeat domain 6##AK295145|WDR6|11180|WD repeat domain 6##NM_018031|WDR6|11180|WD repeat domain 6##BC060321|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AK000269|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC054493|DALRD3|55152|DALR anticodon binding domain containing 3##BC014099|DALRD3|55152|DALR anticodon binding domain containing 3##GQ129423|DALRD3|55152|DALR anticodon binding domain containing 3##GQ129424|DALRD3|55152|DALR anticodon binding domain containing 3##BC047683|DALRD3|55152|DALR anticodon binding domain containing 3##BC032440|DALRD3|55152|DALR anticodon binding domain containing 3##AK093054|DALRD3|55152|DALR anticodon binding domain containing 3##AK301352|DALRD3|55152|DALR anticodon binding domain containing 3##AK001358|DALRD3|55152|DALR anticodon binding domain containing 3##NM_001009996|DALRD3|55152|DALR anticodon binding domain containing 3##NM_199074|NDUFAF3|25915|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3##AK093294|DALRD3|55152|DALR anticodon binding domain containing 3##AK308273|DALRD3|55152|DALR anticodon binding domain containing 3##AK093204|DALRD3|55152|DALR anticodon binding domain containing 3##NM_018114|DALRD3|55152|DALR anticodon binding domain containing 3	0.139072	
chr18	43490507	43490625	reg1009613.p1	10.188	+	AK172835 NM_213602 AY971516 AK290402 AK290400 AK095432	-84942	+	NM_001146037	-183649	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	-186409	+	AB046852 TSC_hg19_v1_chr18_-_43547294 NM_020964	56712	-	DQ893199 DQ893200 DQ893201 DQ893695 DQ896527 DQ896528 DQ896529 TSC_hg19_v1_chr18_-_43652247 BC035395 BC008216 NM_024430	161642	-	TSC_hg19_v1_chr18_-_43668143 AK129804	177611	-	AK172835|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_213602|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AY971516|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290402|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290400|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK095432|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AB046852|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##NM_020964|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##DQ893199|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893200|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893201|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893695|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896527|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896528|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896529|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##BC035395|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##NM_024430|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##AK129804|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	0.997901	CTCF.p2:3:0.998
chr8	17770245	17770373	reg1012968.p1	10.188	+	TSC_hg19_v1_chr8_-_17767878 BC073919	-2429	-	AF042354 AF168954 NM_147203 NM_201553 AX772838 TSC_hg19_v1_chr8_-_17753015 D14446 AK225619 AK289448 AK225616 BC007047 NM_004467 NM_201552	-17363	-	BT006635 CU675515 D87342 TSC_hg19_v1_chr8_-_17743179	-27189	-	TSC_hg19_v1_chr8_+_17780369 L27841 NM_006197	10087	+	TSC_hg19_v1_chr8_+_17780498 AK307583 BC098391	10186	+	TSC_hg19_v1_chr8_+_17780501 BC000453	10196	+	AF042354|FGL1|2267|fibrinogen-like 1##AF168954|FGL1|2267|fibrinogen-like 1##NM_147203|FGL1|2267|fibrinogen-like 1##NM_201553|FGL1|2267|fibrinogen-like 1##AX772838|FGL1|2267|fibrinogen-like 1##D14446|FGL1|2267|fibrinogen-like 1##AK225619|FGL1|2267|fibrinogen-like 1##AK289448|FGL1|2267|fibrinogen-like 1##AK225616|FGL1|2267|fibrinogen-like 1##BC007047|FGL1|2267|fibrinogen-like 1##NM_004467|FGL1|2267|fibrinogen-like 1##NM_201552|FGL1|2267|fibrinogen-like 1##BT006635|FGL1|2267|fibrinogen-like 1##D87342|FGL1|2267|fibrinogen-like 1##L27841|PCM1|5108|pericentriolar material 1##NM_006197|PCM1|5108|pericentriolar material 1##AK307583|PCM1|5108|pericentriolar material 1##BC000453|PCM1|5108|pericentriolar material 1	0.089573	
chr9	120545568	120545707	reg1013465.p1	10.188	+	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-78950	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	-79023	+	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	-79173	+	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	1586021	-	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	2796716	-	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	2931080	-	U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4##BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9	0.507687	CTCF.p2:-2:0.508
chr11	64993181	64993339	reg1011251.p1	10.187	+	AK131327 NM_001004326 BC146850	-11946	+	TSC_hg19_v1_chr11_+_64949413 BC017200	-43821	+	TSC_hg19_v1_chr11_+_64949398 AK301538	-43859	+	TSC_hg19_v1_chr11_+_65029432 AK309284 BC001347 BC002990 BC018813 BC018814 NM_002689 AK297842 AK307831 AK025315	36146	+	NM_006779 TSC_hg19_v1_chr11_+_65082336 AF001436 AF163840 AK315444 BC075834	89077	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	108024	+	AK131327|SLC22A20|440044|solute carrier family 22, member 20##NM_001004326|SLC22A20|440044|solute carrier family 22, member 20##BC146850|SLC22A20|440044|solute carrier family 22, member 20##BC017200|CAPN1|823|calpain 1, (mu/I) large subunit##AK301538|CAPN1|823|calpain 1, (mu/I) large subunit##AK309284|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC001347|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC002990|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018813|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018814|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_002689|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK297842|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK307831|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK025315|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_006779|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF001436|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF163840|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AK315444|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##BC075834|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2	0.742486	CTCF.p2:-3:0.742
chr1	168543648	168543765	reg1010928.p2	10.187	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	-30489	-	AJ010277 NM_005149 BC093664 BC093666 EU446671	-293404	+	TSC_hg19_v1_chr1_+_168195262 BC068098 CU686619	-348413	+	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	2086	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	154723	-	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	532263	+	BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##AJ010277|TBX19|9095|T-box 19##NM_005149|TBX19|9095|T-box 19##BC093664|TBX19|9095|T-box 19##BC093666|TBX19|9095|T-box 19##EU446671|TBX19|9095|T-box 19##BC068098|SFT2D2|375035|SFT2 domain containing 2##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide	0.986147	CTCF.p2:1:0.986
chr1	37169421	37169545	reg1013439.p1	10.186	+	NM_000760 NM_156039 NM_172313	-220569	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-220999	-	TSC_hg19_v1_chr1_-_36929984 AB049946 AB209905 AK021626 BC031336 AF265439 AK315441 AK302633 NM_031280	-239524	-	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	330292	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	770614	+	TSC_hg19_v1_chr1_+_37940140 AK026884	770667	+	NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AB049946|MRPS15|64960|mitochondrial ribosomal protein S15##AB209905|MRPS15|64960|mitochondrial ribosomal protein S15##AK021626|MRPS15|64960|mitochondrial ribosomal protein S15##BC031336|MRPS15|64960|mitochondrial ribosomal protein S15##AF265439|MRPS15|64960|mitochondrial ribosomal protein S15##AK315441|MRPS15|64960|mitochondrial ribosomal protein S15##AK302633|MRPS15|64960|mitochondrial ribosomal protein S15##NM_031280|MRPS15|64960|mitochondrial ribosomal protein S15##AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.99502	CTCF.p2:2:0.916
chr2	71772952	71773087	reg1013211.p1	10.186	+	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-79126	+	NM_001130976 NM_001130977 NM_001130978 NM_001130979 NM_001130980 NM_001130981 NM_003494 AF075575 BC171803 EU515155 EU515156 EU515157 EU515158 EU515159 EU515160	-92218	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	-214122	+	AK295683 TSC_hg19_v1_chr2_-_72371202	598180	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	601923	-	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	1280085	-	DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130976|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130977|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130978|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130979|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130980|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130981|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_003494|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AF075575|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##BC171803|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515155|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515156|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515157|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515158|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515159|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515160|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B	0.993778	CTCF.p2:-16:0.994
chr15	66483979	66484081	reg1010867.p2	10.185	+	TSC_hg19_v1_chr15_-_66321664 AK054827	-162337	-	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	-322183	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-399437	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	62047	-	NM_133375 AK295392 BC022089	101615	+	TSC_hg19_v1_chr15_+_66585931 NM_001143688 AK095407	101869	+	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	0.085651	
chr17	27966670	27966812	reg1012549.p1	10.185	+	BC028205 TSC_hg19_v1_chr17_-_27949878 AL833952	-16890	-	AK096431 NM_032854	-18349	-	TSC_hg19_v1_chr17_+_27920483 NM_152345	-46239	+	TSC_hg19_v1_chr17_-_28088446 BC011636	121717	-	AK302745 AK303060 NM_001145053 AK299608	290155	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	290392	-	BC028205|CORO6|84940|coronin 6##AL833952|CORO6|84940|coronin 6##AK096431|CORO6|84940|coronin 6##NM_032854|CORO6|84940|coronin 6##NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B##BC011636|SSH2|85464|slingshot homolog 2 (Drosophila)##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)	0.01272	
chr2	16734641	16734749	reg1011374.p1	10.185	+	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-652528	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-652700	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	-652922	-	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	112449	-	DQ860102 NM_001099218	965010	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	987192	+	BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1	0.996355	CTCF.p2:2:0.996
chr5	50258864	50259003	reg1010568.p1	10.185	+	TSC_hg19_v1_chr5_+_49962920 AB463183 AM393004	-296006	+	NM_001178056 NM_024615 AK289369 TSC_hg19_v1_chr5_+_49962800 AL834477 BC075801	-296142	+	AK298680 AK314466 BC105789 NM_001178055	-297201	+	BC031213 NM_002202	420024	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	420320	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	1825056	+	AM393004|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178056|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_024615|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK289369|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AL834477|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC075801|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC031213|ISL1|3670|ISL LIM homeobox 1##NM_002202|ISL1|3670|ISL LIM homeobox 1##AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1	0.971782	CTCF.p2:14:0.972
chr3	108271523	108271656	reg1011698.p1	10.184	+	AB023217 NM_014981	-23421	-	BC035971 NM_007072	-250258	+	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	-256188	+	AB463087 AM393250 HQ258525 BC082961 TSC_hg19_v1_chr3_-_108308269 BC130564 BC136371 BC063433 AL713689 AF334474 AK056933 AK308315	36671	-	NM_014648 TSC_hg19_v1_chr3_+_108308395	36776	+	TSC_hg19_v1_chr3_-_108308493 AK310446 NM_020890	36888	-	AB023217|MYH15|22989|myosin, heavy chain 15##NM_014981|MYH15|22989|myosin, heavy chain 15##BC035971|HHLA2|11148|HERV-H LTR-associating 2##NM_007072|HHLA2|11148|HERV-H LTR-associating 2##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2##AM393250|KIAA1524|57650|KIAA1524##BC082961|KIAA1524|57650|KIAA1524##BC130564|KIAA1524|57650|KIAA1524##BC136371|KIAA1524|57650|KIAA1524##BC063433|KIAA1524|57650|KIAA1524##AL713689|KIAA1524|57650|KIAA1524##AF334474|KIAA1524|57650|KIAA1524##AK056933|KIAA1524|57650|KIAA1524##AK308315|KIAA1524|57650|KIAA1524##NM_014648|DZIP3|9666|DAZ interacting protein 3, zinc finger##AK310446|KIAA1524|57650|KIAA1524##NM_020890|KIAA1524|57650|KIAA1524	0.979168	CTCF.p2:6:0.979
chr10	35415781	35415893	reg1008083.p1	10.183	+	TSC_hg19_v1_chr10_-_35379513 BC095405 BC110901 AL832733 AK095217 NM_001198777	-36313	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	-36565	-	AK310225 AK300491 NM_001198778 NM_001198779	-52625	-	NM_001881 NM_182850 NM_182853 NM_183013 BC066342 TSC_hg19_v1_chr10_+_35415928 BC017117	25	+	D14825 TSC_hg19_v1_chr10_+_35416154	298	+	NM_181571 NM_183060 BC041810	548	+	BC095405|CUL2|8453|cullin 2##BC110901|CUL2|8453|cullin 2##AL832733|CUL2|8453|cullin 2##AK095217|CUL2|8453|cullin 2##NM_001198777|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##NM_001881|CREM|1390|cAMP responsive element modulator##NM_182850|CREM|1390|cAMP responsive element modulator##NM_182853|CREM|1390|cAMP responsive element modulator##NM_183013|CREM|1390|cAMP responsive element modulator##BC066342|CREM|1390|cAMP responsive element modulator##BC017117|CREM|1390|cAMP responsive element modulator##D14825|CREM|1390|cAMP responsive element modulator##NM_181571|CREM|1390|cAMP responsive element modulator##NM_183060|CREM|1390|cAMP responsive element modulator##BC041810|CREM|1390|cAMP responsive element modulator	1.029056	CTCF.p2:-22:0.990
chr11	16967583	16967716	reg1012996.p1	10.183	+	TSC_hg19_v1_chr11_+_16760204 BC103747 AK315382 BC007103 BC016352 BC020937 U51678 CR456882 CU675547 AK124165	-207365	+	NM_014267 TSC_hg19_v1_chr11_+_16760165	-207489	+	AF309034 NM_033326	-469724	-	TSC_hg19_v1_chr11_-_16996590 D28414	28927	-	AB385210 TSC_hg19_v1_chr11_-_17035962 BC071599 NM_175058	68316	-	X79239 AB528349 CU688732 TSC_hg19_v1_chr11_-_17099216 DQ891107 DQ894288 BC000475 BC029732 BC100032 BC006772 AK312060 BC066322 D28429 L01124 NM_001017	131590	-	BC103747|C11orf58|10944|chromosome 11 open reading frame 58##AK315382|C11orf58|10944|chromosome 11 open reading frame 58##BC007103|C11orf58|10944|chromosome 11 open reading frame 58##BC016352|C11orf58|10944|chromosome 11 open reading frame 58##BC020937|C11orf58|10944|chromosome 11 open reading frame 58##U51678|C11orf58|10944|chromosome 11 open reading frame 58##CR456882|C11orf58|10944|chromosome 11 open reading frame 58##NM_014267|C11orf58|10944|chromosome 11 open reading frame 58##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6##D28414|RPL36A|6173|ribosomal protein L36a##BC071599|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##NM_175058|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##X79239|RPS13|6207|ribosomal protein S13##DQ891107|RPS13|6207|ribosomal protein S13##DQ894288|RPS13|6207|ribosomal protein S13##BC000475|RPS13|6207|ribosomal protein S13##BC029732|RPS13|6207|ribosomal protein S13##BC100032|RPS13|6207|ribosomal protein S13##BC006772|RPS13|6207|ribosomal protein S13##AK312060|RPS13|6207|ribosomal protein S13##BC066322|RPS13|6207|ribosomal protein S13##L01124|RPS13|6207|ribosomal protein S13##NM_001017|RPS13|6207|ribosomal protein S13	0.537597	CTCF.p2:-4:0.538
chr1	88527278	88527412	reg1011471.p1	10.183	+	TSC_hg19_v1_chr1_+_87797426 BC065818	-729930	+	TSC_hg19_v1_chr1_+_87797312 AY321514	-730020	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	-732664	+	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	622750	+	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	829866	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	829928	-	BC065818|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB	0.768421	CTCF.p2:0:0.768
chr5	96497779	96497897	reg1010222.p1	10.183	+	AK291034 TSC_hg19_v1_chr5_-_96478504 NM_153234 AK098400	-19300	-	AK307885 TSC_hg19_v1_chr5_-_96478482	-19363	-	BC036467 TSC_hg19_v1_chr5_-_96478440	-19396	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	21070	-	TSC_hg19_v1_chr5_-_96518945 AK002021	21104	-	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	21149	-	AK291034|LIX1|167410|Lix1 homolog (chicken)##NM_153234|LIX1|167410|Lix1 homolog (chicken)##AK098400|LIX1|167410|Lix1 homolog (chicken)##AK307885|LIX1|167410|Lix1 homolog (chicken)##BC036467|LIX1|167410|Lix1 homolog (chicken)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)	0.999486	CTCF.p2:14:0.999
chrX	11792791	11792925	reg1008803.p1	10.183	+	NM_006800 AK025642	-15111	+	NM_001193270 AK300814	-16141	+	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	-16515	+	AB002314 NM_014728 AK289694	363732	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	1016639	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	1016710	+	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2	0.990152	CTCF.p2:-8:0.990
chr10	45504179	45504327	reg1012430.p1	10.182	+	TSC_hg19_v1_chr10_-_45496265 AK311351 HQ258049 BC062568 BC130369 BC130395 AK055129 NM_001039380	-7889	-	NM_006963 AK291508 AK312278 BC053687 BC010642	-7926	+	BC011402 AB025244 TSC_hg19_v1_chr10_-_45474258 AK002191 AK098476 AL136653 AB022718 AK300839 AK312496 NM_007021	-29984	-	AK131555 NM_001004297	306802	-	TSC_hg19_v1_chr10_+_45869638 AB208946 NM_000698 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223	365384	+	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	365444	+	AK311351|C10orf25|220979|chromosome 10 open reading frame 25##HQ258049|C10orf25|220979|chromosome 10 open reading frame 25##BC062568|C10orf25|220979|chromosome 10 open reading frame 25##BC130369|C10orf25|220979|chromosome 10 open reading frame 25##BC130395|C10orf25|220979|chromosome 10 open reading frame 25##AK055129|C10orf25|220979|chromosome 10 open reading frame 25##NM_001039380|C10orf25|220979|chromosome 10 open reading frame 25##NM_006963|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK291508|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK312278|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC053687|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC010642|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC011402|C10orf10|11067|chromosome 10 open reading frame 10##AB025244|C10orf10|11067|chromosome 10 open reading frame 10##AK002191|C10orf10|11067|chromosome 10 open reading frame 10##AK098476|C10orf10|11067|chromosome 10 open reading frame 10##AL136653|C10orf10|11067|chromosome 10 open reading frame 10##AB022718|C10orf10|11067|chromosome 10 open reading frame 10##AK300839|C10orf10|11067|chromosome 10 open reading frame 10##AK312496|C10orf10|11067|chromosome 10 open reading frame 10##NM_007021|C10orf10|11067|chromosome 10 open reading frame 10##AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##AB208946|ALOX5|240|arachidonate 5-lipoxygenase##NM_000698|ALOX5|240|arachidonate 5-lipoxygenase##AK225603|ALOX5|240|arachidonate 5-lipoxygenase##BC130332|ALOX5|240|arachidonate 5-lipoxygenase##BC132677|ALOX5|240|arachidonate 5-lipoxygenase##BC143985|ALOX5|240|arachidonate 5-lipoxygenase##BC143986|ALOX5|240|arachidonate 5-lipoxygenase##AK315223|ALOX5|240|arachidonate 5-lipoxygenase##BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase	0.992561	CTCF.p2:3:0.993
chr11	73966958	73967098	reg1013081.p1	10.182	+	TSC_hg19_v1_chr11_+_73882440 AB385584 CU678344 DQ892348 DQ895778	-84573	+	TSC_hg19_v1_chr11_+_73882350 BC003046 BC050705 AK225647 AF157028 NM_016147 AK001381	-84685	+	TSC_hg19_v1_chr11_+_73882299 AK022725	-84746	+	BC089446 TSC_hg19_v1_chr11_-_74022686 BC040582 AL833965 AY358521 AK300598 AY327887 BC117333 BC126170 AY313448 NM_182904	55654	-	TSC_hg19_v1_chr11_-_74109469 BC027950 AB019210 AK056591 BC059360 NM_173582	142462	-	CR936625 DQ192291 NM_005472	211568	-	DQ892348|PPME1|51400|protein phosphatase methylesterase 1##DQ895778|PPME1|51400|protein phosphatase methylesterase 1##BC003046|PPME1|51400|protein phosphatase methylesterase 1##BC050705|PPME1|51400|protein phosphatase methylesterase 1##AK225647|PPME1|51400|protein phosphatase methylesterase 1##AF157028|PPME1|51400|protein phosphatase methylesterase 1##NM_016147|PPME1|51400|protein phosphatase methylesterase 1##AK001381|PPME1|51400|protein phosphatase methylesterase 1##AK022725|PPME1|51400|protein phosphatase methylesterase 1##BC089446|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC040582|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AL833965|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY358521|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AK300598|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY327887|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC117333|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC126170|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY313448|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##NM_182904|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AB019210|PGM2L1|283209|phosphoglucomutase 2-like 1##AK056591|PGM2L1|283209|phosphoglucomutase 2-like 1##BC059360|PGM2L1|283209|phosphoglucomutase 2-like 1##NM_173582|PGM2L1|283209|phosphoglucomutase 2-like 1##CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3	0.999568	CTCF.p2:-15:1.000
chr20	52195431	52195584	reg1011693.p1	10.182	+	AK302570 NM_001193421	-393686	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	-605729	+	BX640770 NM_173485	-606562	+	AF041259 NM_006526	4128	-	TSC_hg19_v1_chr20_-_52210810 AK290350	15292	-	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	491555	-	AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK290350|ZNF217|7764|zinc finger protein 217##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1	0.99984	CTCF.p2:-21:1.000
chr10	46951363	46951516	reg1011631.p1	10.181	+	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-310418	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	-310751	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	-331443	-	BC139914 AK290186 TSC_hg19_v1_chr10_-_46970538	19071	-	TSC_hg19_v1_chr10_-_46970597 AK131036 AK293632 NM_031912 NM_181519	19161	-	BC011672 NM_014696	42106	+	BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##BC139914|SYT15|83849|synaptotagmin XV##AK290186|SYT15|83849|synaptotagmin XV##AK131036|SYT15|83849|synaptotagmin XV##AK293632|SYT15|83849|synaptotagmin XV##NM_031912|SYT15|83849|synaptotagmin XV##NM_181519|SYT15|83849|synaptotagmin XV##BC011672|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##NM_014696|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2	0.989336	CTCF.p2:5:0.989
chr1	209742902	209743056	reg1011070.p1	10.181	+	AK091113 AX746785 NM_001104548	-140814	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-1325330	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-1658422	-	NM_020439 AK095713 AK289675 AF428261 BC032787	14081	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	81700	-	L25541 NM_001127641 D37766 TSC_hg19_v1_chr1_-_209825771 AK296851 AK309524	82745	-	NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3##L25541|LAMB3|3914|laminin, beta 3##NM_001127641|LAMB3|3914|laminin, beta 3##D37766|LAMB3|3914|laminin, beta 3##AK296851|LAMB3|3914|laminin, beta 3##AK309524|LAMB3|3914|laminin, beta 3	0.999486	CTCF.p2:-4:0.999
chr12	121382487	121382619	reg1012479.p1	10.181	+	TSC_hg19_v1_chr12_-_121342070 AK223590 NM_139015	-40419	-	AY169313 TSC_hg19_v1_chr12_-_121341927 BC073910 AK291161	-40589	-	AK074916 TSC_hg19_v1_chr12_-_121248688	-133870	-	TSC_hg19_v1_chr12_+_121416378 X71346 HM116541 HM116542 HM116543 HM116544 HM116545 HM116546 HM116547 HM116548 HM116549 HM116550 HM116551 X71347 HM116552 HM116557 HM116558 HM116559 HM116560 HM116561 HM116562 HM116563 AK298422	33844	+	HM449088 HM449089 M57732 NM_000545 BC104908 BC104910 BC143483 TSC_hg19_v1_chr12_+_121416562 AB527468 EU446660	34005	+	TSC_hg19_v1_chr12_-_121454230 BC014661	71691	-	AK223590|SPPL3|121665|signal peptide peptidase-like 3##NM_139015|SPPL3|121665|signal peptide peptidase-like 3##AY169313|SPPL3|121665|signal peptide peptidase-like 3##BC073910|SPPL3|121665|signal peptide peptidase-like 3##AK291161|SPPL3|121665|signal peptide peptidase-like 3##AK074916|SPPL3|121665|signal peptide peptidase-like 3##X71346|HNF1A|6927|HNF1 homeobox A##HM116541|HNF1A|6927|HNF1 homeobox A##HM116542|HNF1A|6927|HNF1 homeobox A##HM116543|HNF1A|6927|HNF1 homeobox A##HM116544|HNF1A|6927|HNF1 homeobox A##HM116545|HNF1A|6927|HNF1 homeobox A##HM116546|HNF1A|6927|HNF1 homeobox A##HM116547|HNF1A|6927|HNF1 homeobox A##HM116548|HNF1A|6927|HNF1 homeobox A##HM116549|HNF1A|6927|HNF1 homeobox A##X71347|HNF1A|6927|HNF1 homeobox A##HM116552|HNF1A|6927|HNF1 homeobox A##HM116557|HNF1A|6927|HNF1 homeobox A##HM116558|HNF1A|6927|HNF1 homeobox A##HM116559|HNF1A|6927|HNF1 homeobox A##HM116560|HNF1A|6927|HNF1 homeobox A##HM116561|HNF1A|6927|HNF1 homeobox A##HM116563|HNF1A|6927|HNF1 homeobox A##AK298422|HNF1A|6927|HNF1 homeobox A##HM449088|HNF1A|6927|HNF1 homeobox A##HM449089|HNF1A|6927|HNF1 homeobox A##M57732|HNF1A|6927|HNF1 homeobox A##NM_000545|HNF1A|6927|HNF1 homeobox A##BC104908|HNF1A|6927|HNF1 homeobox A##BC104910|HNF1A|6927|HNF1 homeobox A##BC143483|HNF1A|6927|HNF1 homeobox A##EU446660|HNF1A|6927|HNF1 homeobox A##BC014661|C12orf43|64897|chromosome 12 open reading frame 43	0.894763	CTCF.p2:-12:0.864
chr19	46585615	46585744	reg1011922.p1	10.181	+	AY672114 NM_001002923	-41406	-	NM_005091	-59124	-	TSC_hg19_v1_chr19_+_46498724 GQ375050	-86952	+	HQ258051 BC130593 BC130597 AY358434 AY672113 NM_207393	42242	-	AY672112 NM_001002915	65359	+	AY358692 NM_001135113	65820	+	AY672114|IGFL4|444882|IGF-like family member 4##NM_001002923|IGFL4|444882|IGF-like family member 4##NM_005091|PGLYRP1|8993|peptidoglycan recognition protein 1##GQ375050|CCDC61|729440|coiled-coil domain containing 61##HQ258051|IGFL3|388555|IGF-like family member 3##BC130593|IGFL3|388555|IGF-like family member 3##BC130597|IGFL3|388555|IGF-like family member 3##AY358434|IGFL3|388555|IGF-like family member 3##AY672113|IGFL3|388555|IGF-like family member 3##NM_207393|IGFL3|388555|IGF-like family member 3##AY672112|IGFL2|147920|IGF-like family member 2##NM_001002915|IGFL2|147920|IGF-like family member 2##AY358692|IGFL2|147920|IGF-like family member 2##NM_001135113|IGFL2|147920|IGF-like family member 2	0.244582	CTCF.p2:-11:0.245
chr6	153633891	153634022	reg1011617.p1	10.180	+	AB055767 TSC_hg19_v1_chr6_-_153603892	-30065	-	BC013117 NM_012419 AF202257 TSC_hg19_v1_chr6_-_153452453	-181536	-	TSC_hg19_v1_chr6_-_153323873 AK297671 NM_001114184 NM_019041	-310059	-	DQ680044 NM_001145279 NM_001145280 EU340241 EU340242 EU340243 NM_001145281	697676	+	L29301 NM_000914 NM_001008503 NM_001008504 NM_001008505 NM_001145282 NM_001145283 NM_001145284 NM_001145285 NM_001145286 L25119 U12569 AB590577 AK309655 AK313901 AY225404 AY364230 AY036622 AY036623 AY309001 AY309005 AY309006 AY309007 AY309008 AY309009 BC074927 AY521028	726604	+	EU360599 EU362990 NM_001145287	773685	+	BC013117|RGS17|26575|regulator of G-protein signaling 17##NM_012419|RGS17|26575|regulator of G-protein signaling 17##AF202257|RGS17|26575|regulator of G-protein signaling 17##AK297671|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_001114184|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_019041|MTRF1L|54516|mitochondrial translational release factor 1-like##DQ680044|OPRM1|4988|opioid receptor, mu 1##NM_001145279|OPRM1|4988|opioid receptor, mu 1##NM_001145280|OPRM1|4988|opioid receptor, mu 1##EU340241|OPRM1|4988|opioid receptor, mu 1##EU340242|OPRM1|4988|opioid receptor, mu 1##EU340243|OPRM1|4988|opioid receptor, mu 1##NM_001145281|OPRM1|4988|opioid receptor, mu 1##L29301|OPRM1|4988|opioid receptor, mu 1##NM_000914|OPRM1|4988|opioid receptor, mu 1##NM_001008503|OPRM1|4988|opioid receptor, mu 1##NM_001008504|OPRM1|4988|opioid receptor, mu 1##NM_001008505|OPRM1|4988|opioid receptor, mu 1##NM_001145282|OPRM1|4988|opioid receptor, mu 1##NM_001145283|OPRM1|4988|opioid receptor, mu 1##NM_001145284|OPRM1|4988|opioid receptor, mu 1##NM_001145285|OPRM1|4988|opioid receptor, mu 1##NM_001145286|OPRM1|4988|opioid receptor, mu 1##L25119|OPRM1|4988|opioid receptor, mu 1##U12569|OPRM1|4988|opioid receptor, mu 1##AK313901|OPRM1|4988|opioid receptor, mu 1##AY225404|OPRM1|4988|opioid receptor, mu 1##AY364230|OPRM1|4988|opioid receptor, mu 1##AY036622|OPRM1|4988|opioid receptor, mu 1##AY036623|OPRM1|4988|opioid receptor, mu 1##AY309001|OPRM1|4988|opioid receptor, mu 1##AY309005|OPRM1|4988|opioid receptor, mu 1##AY309006|OPRM1|4988|opioid receptor, mu 1##AY309007|OPRM1|4988|opioid receptor, mu 1##AY309008|OPRM1|4988|opioid receptor, mu 1##AY309009|OPRM1|4988|opioid receptor, mu 1##BC074927|OPRM1|4988|opioid receptor, mu 1##AY521028|OPRM1|4988|opioid receptor, mu 1##EU360599|OPRM1|4988|opioid receptor, mu 1##EU362990|OPRM1|4988|opioid receptor, mu 1##NM_001145287|OPRM1|4988|opioid receptor, mu 1	0.993761	CTCF.p2:9:0.994
chr4	91214584	91214714	reg1011393.p1	10.178	+	BC051694 NM_207491	-58468	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-165931	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-398587	+	AB209318 NM_001510 AK308611	2010943	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	3535412	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	3914162	+	BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.026899	
chr9	35790415	35790548	reg1010023.p1	10.178	+	DQ012170 BC071800 BC105274 NM_001044264	-36209	-	TSC_hg19_v1_chr9_+_35749334 D87447 BC001725	-41145	+	NM_001080496 TSC_hg19_v1_chr9_+_35749276 AK289566	-41200	+	AJ005282 NM_003995	1924	+	DQ890798 EU176503 BC019247 AK302313 NM_001039592 NM_172312 S83157 U12978	21719	-	TSC_hg19_v1_chr9_-_35815018 AK222582 AF356515 AY033094 AF356875 BC047737 AF085236	24531	-	DQ012170|MSMP|692094|microseminoprotein, prostate associated##BC071800|MSMP|692094|microseminoprotein, prostate associated##BC105274|MSMP|692094|microseminoprotein, prostate associated##NM_001044264|MSMP|692094|microseminoprotein, prostate associated##D87447|RGP1|9827|RGP1 retrograde golgi transport homolog (S. cerevisiae)##BC001725|RGP1|9827|RGP1 retrograde golgi transport homolog (S. cerevisiae)##NM_001080496|RGP1|9827|RGP1 retrograde golgi transport homolog (S. cerevisiae)##AK289566|RGP1|9827|RGP1 retrograde golgi transport homolog (S. cerevisiae)##AJ005282|NPR2|4882|natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B)##NM_003995|NPR2|4882|natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B)##DQ890798|SPAG8|26206|sperm associated antigen 8##EU176503|SPAG8|26206|sperm associated antigen 8##BC019247|SPAG8|26206|sperm associated antigen 8##AK302313|SPAG8|26206|sperm associated antigen 8##NM_001039592|SPAG8|26206|sperm associated antigen 8##NM_172312|SPAG8|26206|sperm associated antigen 8##S83157|SPAG8|26206|sperm associated antigen 8##U12978|SPAG8|26206|sperm associated antigen 8##AK222582|HINT2|84681|histidine triad nucleotide binding protein 2##AF356515|HINT2|84681|histidine triad nucleotide binding protein 2##AY033094|HINT2|84681|histidine triad nucleotide binding protein 2##AF356875|HINT2|84681|histidine triad nucleotide binding protein 2##BC047737|HINT2|84681|histidine triad nucleotide binding protein 2##AF085236|HINT2|84681|histidine triad nucleotide binding protein 2	0.192051	
chr17	2185672	2185813	reg1011030.p2	10.177	+	DQ187313 NM_001098202	-226185	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-227344	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-240434	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	21070	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	21298	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	21510	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.026675	
chr7	83285424	83285527	reg1010409.p2	10.177	+	NM_012431	-6997	-	AK303925 NM_001178129	-14729	-	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	-493239	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	538847	-	NM_152754	1465771	-	AK309116 TSC_hg19_v1_chr7_-_84816296	1530760	-	NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	0.109902	
chr1	52234788	52234892	reg1010262.p1	10.176	+	TSC_hg19_v1_chr1_+_52195604 AK022554	-39186	+	TSC_hg19_v1_chr1_+_52195549 AK027707 BC025978	-39294	+	TSC_hg19_v1_chr1_+_52195487 NM_148904 NM_148905 NM_148907 AK315167	-39363	+	AY360265 AK311631 NM_001242361	108860	-	TSC_hg19_v1_chr1_-_52344010 AK299271	109194	-	TSC_hg19_v1_chr1_-_52344354 AY049784	109493	-	AK022554|OSBPL9|114883|oxysterol binding protein-like 9##AK027707|OSBPL9|114883|oxysterol binding protein-like 9##BC025978|OSBPL9|114883|oxysterol binding protein-like 9##NM_148904|OSBPL9|114883|oxysterol binding protein-like 9##NM_148905|OSBPL9|114883|oxysterol binding protein-like 9##NM_148907|OSBPL9|114883|oxysterol binding protein-like 9##AK315167|OSBPL9|114883|oxysterol binding protein-like 9##AY360265|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AK311631|NRD1|4898|nardilysin (N-arginine dibasic convertase)##NM_001242361|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AY049784|NRD1|4898|nardilysin (N-arginine dibasic convertase)	0.981552	CTCF.p2:0:0.982
chr1	93770314	93770440	reg1010293.p1	10.176	+	TSC_hg19_v1_chr1_+_93646280 BC056667 NM_206886	-124096	+	BC070051 NM_001167830 NM_016040	-124132	-	AY359039 BC016556 AF151858 TSC_hg19_v1_chr1_-_93645971 AK293308 BC016365 AK312787 CR936808 AK125882	-124390	-	TSC_hg19_v1_chr1_-_93811348 Z36846 AL832786	40975	-	AK223442 TSC_hg19_v1_chr1_+_93811463	41086	+	TSC_hg19_v1_chr1_+_93811479 BC035507 NM_001938 BC068553	41101	+	BC056667|CCDC18|343099|coiled-coil domain containing 18##NM_206886|CCDC18|343099|coiled-coil domain containing 18##BC070051|TMED5|50999|transmembrane emp24 protein transport domain containing 5##NM_001167830|TMED5|50999|transmembrane emp24 protein transport domain containing 5##NM_016040|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AY359039|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016556|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AF151858|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK293308|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016365|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK312787|TMED5|50999|transmembrane emp24 protein transport domain containing 5##CR936808|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK125882|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AL832786|LOC100131564|100131564|uncharacterized LOC100131564##AK223442|DR1|1810|down-regulator of transcription 1, TBP-binding (negative cofactor 2)##BC035507|DR1|1810|down-regulator of transcription 1, TBP-binding (negative cofactor 2)##NM_001938|DR1|1810|down-regulator of transcription 1, TBP-binding (negative cofactor 2)##BC068553|DR1|1810|down-regulator of transcription 1, TBP-binding (negative cofactor 2)	0.994852	CTCF.p2:0:0.995
chr6	117926493	117926628	reg1012850.p1	10.176	+	TSC_hg19_v1_chr6_-_117923706 NM_001017408 NM_020399	-2846	-	TSC_hg19_v1_chr6_-_117923682 AF450008	-2874	-	TSC_hg19_v1_chr6_-_117923675 AK314486	-2887	-	TSC_hg19_v1_chr6_-_117996469 AK125564	69878	-	NM_138459 BC066910 TSC_hg19_v1_chr6_+_117996631	70064	+	TSC_hg19_v1_chr6_+_117996651 BC150654 BC150655 AK125119	70087	+	NM_001017408|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##NM_020399|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AF450008|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AK314486|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##NM_138459|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC066910|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150654|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150655|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##AK125119|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	0.784509	CTCF.p2:11:0.785
chr6	36853483	36853609	reg1011046.p1	10.176	+	NM_016059 TSC_hg19_v1_chr6_-_36842800	-10746	-	BC003048 AF151882 AY359032 TSC_hg19_v1_chr6_-_36842797	-10772	-	DQ892513 DQ895727 AB528504 TSC_hg19_v1_chr6_-_36842573 AK026636	-10969	-	NM_152734 AJ420498 TSC_hg19_v1_chr6_+_36853727 BC095423 AK172780 AK315984 BC105947 BC107489 BC105946 BX538108 AK300351 AY358637 BX647220 BC023605	164	+	NM_001199159	62492	+	BC035634 NM_153370	68662	+	NM_016059|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##BC003048|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##AF151882|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##AY359032|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##DQ892513|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##DQ895727|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##AK026636|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##NM_152734|C6orf89|221477|chromosome 6 open reading frame 89##AJ420498|C6orf89|221477|chromosome 6 open reading frame 89##BC095423|C6orf89|221477|chromosome 6 open reading frame 89##AK172780|C6orf89|221477|chromosome 6 open reading frame 89##AK315984|C6orf89|221477|chromosome 6 open reading frame 89##BC105947|C6orf89|221477|chromosome 6 open reading frame 89##BC107489|C6orf89|221477|chromosome 6 open reading frame 89##BC105946|C6orf89|221477|chromosome 6 open reading frame 89##BX538108|C6orf89|221477|chromosome 6 open reading frame 89##AK300351|C6orf89|221477|chromosome 6 open reading frame 89##AY358637|C6orf89|221477|chromosome 6 open reading frame 89##BX647220|C6orf89|221477|chromosome 6 open reading frame 89##BC023605|C6orf89|221477|chromosome 6 open reading frame 89##NM_001199159|PI16|221476|peptidase inhibitor 16##BC035634|PI16|221476|peptidase inhibitor 16##NM_153370|PI16|221476|peptidase inhibitor 16	0.230013	CTCF.p2:13:0.230
chr16	85793566	85793668	reg1010321.p2	10.175	+	TSC_hg19_v1_chr16_-_85784703 NM_206967	-8929	-	BC003186 NM_016095 TSC_hg19_v1_chr16_-_85722590	-71018	-	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	-71075	-	BT007132 CU675661 AF005888 TSC_hg19_v1_chr16_-_85833151 BC007445 BC001472 BC005886 BC020250 AK313977 NM_001142288 NM_006067	39424	-	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	39616	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	39688	+	NM_206967|C16orf74|404550|chromosome 16 open reading frame 74##BC003186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_016095|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BT007132|COX4NB|10328|COX4 neighbor##AF005888|COX4NB|10328|COX4 neighbor##BC007445|COX4NB|10328|COX4 neighbor##BC001472|COX4NB|10328|COX4 neighbor##BC005886|COX4NB|10328|COX4 neighbor##BC020250|COX4NB|10328|COX4 neighbor##AK313977|COX4NB|10328|COX4 neighbor##NM_001142288|COX4NB|10328|COX4 neighbor##NM_006067|COX4NB|10328|COX4 neighbor##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1	0.976928	CTCF.p2:9:0.977
chr19	47207875	47207991	reg1011492.p1	10.175	+	BC015472 TSC_hg19_v1_chr19_-_47197232	-10734	-	TSC_hg19_v1_chr19_-_47164311 BC034052 NM_145056	-43563	-	AF493875 NM_033258 BC095514	-69994	-	NM_001079882	9643	-	TSC_hg19_v1_chr19_-_47220370 AK300339 AK095884 NM_001079880 NM_001079881 NM_016457	12449	-	NM_001039885 NM_024301 TSC_hg19_v1_chr19_+_47249314 AK095497 AJ314847 AK022638 AK291282	41376	+	BC015472|PRKD2|25865|protein kinase D2##BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)##NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)##AF493875|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##NM_033258|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##BC095514|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##NM_001079882|PRKD2|25865|protein kinase D2##AK300339|PRKD2|25865|protein kinase D2##AK095884|PRKD2|25865|protein kinase D2##NM_001079880|PRKD2|25865|protein kinase D2##NM_001079881|PRKD2|25865|protein kinase D2##NM_016457|PRKD2|25865|protein kinase D2##NM_001039885|FKRP|79147|fukutin related protein##NM_024301|FKRP|79147|fukutin related protein##AK095497|FKRP|79147|fukutin related protein##AJ314847|FKRP|79147|fukutin related protein##AK022638|FKRP|79147|fukutin related protein##AK291282|FKRP|79147|fukutin related protein	0.997187	CTCF.p2:-21:0.997
chr1_gl000192_random	476653	476765	reg1012547.p1	10.175	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.751701	CTCF.p2:-2:0.752
chr8	17434476	17434618	reg1011128.p2	10.175	+	AK289450 NM_006207	-606	+	NM_001164771 NM_003046 BC069648 BC104905 BC113661 BC143583	-38209	+	TSC_hg19_v1_chr8_+_17354599 NM_001008539 AK314287	-79967	+	D37965 TSC_hg19_v1_chr8_+_17434724 BC010927 AB529173 CR541952 CU679854 DQ892944 DQ896192	183	+	AF293357 BC017740 AK314692 BC098381 BC142971 FJ472827 AK289750 NM_020749	120654	-	AK125188 FJ472826 NM_001001931	145182	-	AK289450|PDGFRL|5157|platelet-derived growth factor receptor-like##NM_006207|PDGFRL|5157|platelet-derived growth factor receptor-like##NM_001164771|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##NM_003046|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##BC069648|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##BC104905|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##BC113661|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##BC143583|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##NM_001008539|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##AK314287|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##D37965|PDGFRL|5157|platelet-derived growth factor receptor-like##BC010927|PDGFRL|5157|platelet-derived growth factor receptor-like##CR541952|PDGFRL|5157|platelet-derived growth factor receptor-like##DQ892944|PDGFRL|5157|platelet-derived growth factor receptor-like##DQ896192|PDGFRL|5157|platelet-derived growth factor receptor-like##AF293357|MTUS1|57509|microtubule associated tumor suppressor 1##BC017740|MTUS1|57509|microtubule associated tumor suppressor 1##AK314692|MTUS1|57509|microtubule associated tumor suppressor 1##BC098381|MTUS1|57509|microtubule associated tumor suppressor 1##BC142971|MTUS1|57509|microtubule associated tumor suppressor 1##FJ472827|MTUS1|57509|microtubule associated tumor suppressor 1##AK289750|MTUS1|57509|microtubule associated tumor suppressor 1##NM_020749|MTUS1|57509|microtubule associated tumor suppressor 1##AK125188|MTUS1|57509|microtubule associated tumor suppressor 1##FJ472826|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1	0.9171	CTCF.p2:12:0.917
chr2	230666011	230666125	reg1011505.p1	10.174	+	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	-86820	-	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	-530063	-	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-1619706	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	120593	-	TSC_hg19_v1_chr2_-_230786712 AK310971	120681	-	TSC_hg19_v1_chr2_+_230787218 BC017869 BC022538 NM_174899 BC033935 AK289655 AK309702	121149	+	AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12##BC017869|FBXO36|130888|F-box protein 36##BC022538|FBXO36|130888|F-box protein 36##NM_174899|FBXO36|130888|F-box protein 36##BC033935|FBXO36|130888|F-box protein 36##AK289655|FBXO36|130888|F-box protein 36##AK309702|FBXO36|130888|F-box protein 36	0.999616	CTCF.p2:-2:1.000
chr4	25769626	25769737	reg1010547.p2	10.174	+	NM_001177999 AK314514	-111591	+	NM_001177998 NM_006424 AK292675 AF111856 AK075046 TSC_hg19_v1_chr4_+_25657473 AF146796 BC142704 BC146666	-112221	+	TSC_hg19_v1_chr4_+_25378893 AK292336 AF191338	-390719	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	94873	-	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	146183	+	L07875 BC020780 NM_005349 NM_203283	551638	+	NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_001177998|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_006424|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK292675|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF111856|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK075046|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF146796|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC142704|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC146666|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK292336|ANAPC4|29945|anaphase promoting complex subunit 4##AF191338|ANAPC4|29945|anaphase promoting complex subunit 4##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.541755	CTCF.p2:10:0.542
chr12	42523556	42523683	reg1009513.p1	10.173	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	-692032	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	-941411	+	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	-1437337	+	TSC_hg19_v1_chr12_-_42538503 AK125141 NM_001099650 NM_173601 BC030023	14960	-	CU691510 EU446625 EU446756 AB527838 TSC_hg19_v1_chr12_-_42632024 BC037777 AK127531 AK291355 AK296191 AK294260 NM_001190977	108416	-	NM_001190979 NM_001190980 NM_005748 TSC_hg19_v1_chr12_-_42632167	108552	-	AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##AK125141|GXYLT1|283464|glucoside xylosyltransferase 1##NM_001099650|GXYLT1|283464|glucoside xylosyltransferase 1##NM_173601|GXYLT1|283464|glucoside xylosyltransferase 1##BC030023|GXYLT1|283464|glucoside xylosyltransferase 1##EU446625|YAF2|10138|YY1 associated factor 2##EU446756|YAF2|10138|YY1 associated factor 2##BC037777|YAF2|10138|YY1 associated factor 2##AK127531|YAF2|10138|YY1 associated factor 2##AK291355|YAF2|10138|YY1 associated factor 2##AK296191|YAF2|10138|YY1 associated factor 2##AK294260|YAF2|10138|YY1 associated factor 2##NM_001190977|YAF2|10138|YY1 associated factor 2##NM_001190979|YAF2|10138|YY1 associated factor 2##NM_001190980|YAF2|10138|YY1 associated factor 2##NM_005748|YAF2|10138|YY1 associated factor 2	0.459597	CTCF.p2:-16:0.460
chr2	74917847	74917974	reg1010264.p1	10.173	+	TSC_hg19_v1_chr2_+_74881437 AK095587 AK312728 AL136552 NM_004263 AK075384 AK304358 AK291023 BC018361 BC038411 AK308166 AB021292 AB022317 AB463247 AM393735 CU676238 CU691566 DQ895677	-36482	+	BC025997 NM_138804	-42747	-	AK222883 TSC_hg19_v1_chr2_+_74781875 BC111055 U70987 BC114440 AK127127 AK127656 AK314678 BC114497 AK296154 AB587402 AF180527 AK300097	-136047	+	AF086198 NM_000189	141871	+	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	143350	+	TSC_hg19_v1_chr2_-_75062285 BC013295	144341	-	AK312728|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AL136552|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##NM_004263|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK075384|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK304358|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK291023|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC018361|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC038411|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK308166|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AB021292|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AB022317|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AM393735|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##DQ895677|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC025997|C2orf65|130951|chromosome 2 open reading frame 65##NM_138804|C2orf65|130951|chromosome 2 open reading frame 65##AK222883|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC111055|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##U70987|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC114440|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK127127|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK127656|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK314678|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC114497|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK296154|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF180527|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK300097|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF086198|HK2|3099|hexokinase 2##NM_000189|HK2|3099|hexokinase 2##AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2	0.0	
chr1	85248277	85248409	reg1012957.p1	10.172	+	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-92267	-	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-208237	-	TSC_hg19_v1_chr1_-_84972262 NM_005274	-276074	-	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	110543	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	214365	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	265802	-	AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##NM_005274|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3	0.691728	CTCF.p2:0:0.692
chr13	31125466	31125584	reg1011371.p2	10.171	+	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	-85467	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	-85532	-	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-243956	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	66102	-	NM_005800 BC038103 TSC_hg19_v1_chr13_+_31192056 BC036027 AK289826 CR627370 X59131 BC012594 AL832776	66438	+	AK314143 NM_001204406	162089	+	AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1##NM_005800|USPL1|10208|ubiquitin specific peptidase like 1##BC038103|USPL1|10208|ubiquitin specific peptidase like 1##BC036027|USPL1|10208|ubiquitin specific peptidase like 1##AK289826|USPL1|10208|ubiquitin specific peptidase like 1##CR627370|USPL1|10208|ubiquitin specific peptidase like 1##X59131|USPL1|10208|ubiquitin specific peptidase like 1##BC012594|USPL1|10208|ubiquitin specific peptidase like 1##AL832776|USPL1|10208|ubiquitin specific peptidase like 1##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein	0.531908	CTCF.p2:6:0.532
chr16	50543611	50543749	reg1012944.p1	10.171	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	-140850	-	NM_001114 D25538	-221857	+	TSC_hg19_v1_chr16_+_50308041 BC039891	-235627	+	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	38646	+	TSC_hg19_v1_chr16_-_50647562 AK124375	103898	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	171497	-	AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20	0.03063	
chr7	138571348	138571488	reg1013325.p1	10.170	+	BC109304 BC109305 AF245517 AK292945 NM_020632 NM_130840	-88524	-	BC131697 AK055841 NM_001085429 BC058028	-88695	+	NM_130841	-112637	-	TSC_hg19_v1_chr7_-_138666114 AM989468 AM989469 AM989472 AM989473 AM989474 NM_001164665 NM_020910	94815	-	TSC_hg19_v1_chr7_-_138720787 BC008842 NM_080660 BC020784	149416	-	AK055851 BX647974 TSC_hg19_v1_chr7_-_138794101	222683	-	BC109304|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC109305|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AF245517|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AK292945|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_020632|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_130840|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC131697|TMEM213|155006|transmembrane protein 213##AK055841|TMEM213|155006|transmembrane protein 213##NM_001085429|TMEM213|155006|transmembrane protein 213##BC058028|TMEM213|155006|transmembrane protein 213##NM_130841|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AM989468|KIAA1549|57670|KIAA1549##AM989469|KIAA1549|57670|KIAA1549##NM_001164665|KIAA1549|57670|KIAA1549##NM_020910|KIAA1549|57670|KIAA1549##BC008842|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##NM_080660|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##BC020784|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##AK055851|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BX647974|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1	0.610004	CTCF.p2:-17:0.610
chr1	75155597	75155728	reg1012310.p1	10.169	+	AK127470 NM_001002912	-16241	-	NM_015978 AF116826 AK307984 BC113539 BC117262 AY303691 HQ258528	-454560	+	NM_001112808 NM_001199327 NM_001199328 NM_001199329 NM_003838 TSC_hg19_v1_chr1_+_74663927 BC020720 AK294948 AF017445 AK304490 BC032865 AK223254 BC032308 AK299468	-491726	+	TSC_hg19_v1_chr1_-_75198733 AK128794 BX647883 BC039578 AK223150 AK223201 AB209714 AK314813 BC070058	43050	-	NM_001162916 AK098237 BC071765 NM_138467 AK294264 AK299849 BC009514 AK311272 AB590606	43218	+	NM_001130042 NM_001130043 NM_001134759 NM_001889	43429	-	AK127470|C1orf173|127254|chromosome 1 open reading frame 173##NM_001002912|C1orf173|127254|chromosome 1 open reading frame 173##NM_015978|TNNI3K|51086|TNNI3 interacting kinase##AF116826|TNNI3K|51086|TNNI3 interacting kinase##AK307984|TNNI3K|51086|TNNI3 interacting kinase##BC113539|TNNI3K|51086|TNNI3 interacting kinase##BC117262|TNNI3K|51086|TNNI3 interacting kinase##AY303691|TNNI3K|51086|TNNI3 interacting kinase##HQ258528|TNNI3K|51086|TNNI3 interacting kinase##NM_001112808|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199327|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199328|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_001199329|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_003838|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC020720|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK294948|FPGT|8790|fucose-1-phosphate guanylyltransferase##AF017445|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK304490|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032865|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##AK223254|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032308|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK299468|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK128794|CRYZ|1429|crystallin, zeta (quinone reductase)##BX647883|CRYZ|1429|crystallin, zeta (quinone reductase)##BC039578|CRYZ|1429|crystallin, zeta (quinone reductase)##AK223150|CRYZ|1429|crystallin, zeta (quinone reductase)##AK223201|CRYZ|1429|crystallin, zeta (quinone reductase)##AB209714|CRYZ|1429|crystallin, zeta (quinone reductase)##AK314813|CRYZ|1429|crystallin, zeta (quinone reductase)##BC070058|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001162916|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK098237|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC071765|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##NM_138467|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK294264|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK299849|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC009514|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK311272|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)	0.945569	CTCF.p2:23:0.946
chr11	108525843	108525979	reg1013399.p1	10.168	+	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	-61507	-	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	-156716	-	BC059411 BC029536 AK303096 NM_152587	-187669	-	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	9903	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	766932	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	766988	+	BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5##AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC029536|C11orf65|160140|chromosome 11 open reading frame 65##AK303096|C11orf65|160140|chromosome 11 open reading frame 65##NM_152587|C11orf65|160140|chromosome 11 open reading frame 65##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87	0.997066	CTCF.p2:16:0.997
chr10	97777090	97777238	reg1013889.p1	10.167	+	NM_001001732 NM_001159747 AK302377 BC075861	-17300	+	AK294399 NM_001130446	-109443	+	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	-261624	+	TSC_hg19_v1_chr10_+_97803318 BC043175 NM_001134375 NM_001134376 NM_019084 AK092360 AK297264 AX747499	26217	+	CU692146 TSC_hg19_v1_chr10_+_97804165	26995	+	TSC_hg19_v1_chr10_-_97849968 AK096469 AK091396	72795	-	NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B##NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##BC043175|CCNJ|54619|cyclin J##NM_001134375|CCNJ|54619|cyclin J##NM_001134376|CCNJ|54619|cyclin J##NM_019084|CCNJ|54619|cyclin J##AK092360|CCNJ|54619|cyclin J##AK297264|CCNJ|54619|cyclin J##AK096469|LOC728558|728558|uncharacterized LOC728558##AK091396|LOC728558|728558|uncharacterized LOC728558	0.999329	CTCF.p2:-10:0.999
chr16	24048106	24048211	reg1008525.p1	10.167	+	AB587511 EU832791 GQ129253 TSC_hg19_v1_chr16_+_23847512	-200652	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	-200763	+	TSC_hg19_v1_chr16_+_23847321 BC036472	-200826	+	BC037899 NM_006539 AK095553	218716	+	AK055453 TSC_hg19_v1_chr16_+_24267474	219316	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	219540	+	EU832791|PRKCB|5579|protein kinase C, beta##GQ129253|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	0.907186	CTCF.p2:19:0.907
chr3	150643583	150643699	reg1011512.p1	10.167	+	TSC_hg19_v1_chr3_-_150481278 U76248 NM_005067	-162519	-	TSC_hg19_v1_chr3_-_150480936 BC013082	-162711	-	TSC_hg19_v1_chr3_-_150480902 AK223565	-162742	-	AF388366 AF388368 NM_052995	18381	-	AF482697 NM_001195794 NM_174878	47144	-	TSC_hg19_v1_chr3_+_150803504 AK128165	159864	+	U76248|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##NM_005067|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##BC013082|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##AK223565|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##AF388366|CLRN1|7401|clarin 1##AF388368|CLRN1|7401|clarin 1##NM_052995|CLRN1|7401|clarin 1##AF482697|CLRN1|7401|clarin 1##NM_001195794|CLRN1|7401|clarin 1##NM_174878|CLRN1|7401|clarin 1##AK128165|MED12L|116931|mediator complex subunit 12-like	0.939534	CTCF.p2:0:0.928
chr7	76961300	76961445	reg1010518.p2	10.167	+	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	-132236	-	BC036053 NM_020879 BX649000 AK292491 HM370402	-209426	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-704825	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	84346	-	TSC_hg19_v1_chr7_+_77166392 BC050008	205006	+	TSC_hg19_v1_chr7_+_77166764 NM_002835 AB209524 AK314236 AK289573 M93425 D13380 AB384966	205434	+	GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)##BC050008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_002835|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AB209524|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK314236|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK289573|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##M93425|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##D13380|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	0.837037	CTCF.p2:-6:0.837
chr1	153328102	153328208	reg1008719.p1	10.166	+	AY035377 NM_020393 AF242518	-7123	-	BC128114 BC128115 BC069741 BC069798 BC069801 AY035376 NM_052891	-44976	-	BC108290 NM_000427	-95977	+	AK311882 NM_002965 X06233 TSC_hg19_v1_chr1_+_153330329 BC047681 AF086362	2183	+	X97859 BC070294 D83664 NM_005621	19910	-	Y00278 AK291328 X06234 NM_002964	35448	-	AY035377|PGLYRP4|57115|peptidoglycan recognition protein 4##NM_020393|PGLYRP4|57115|peptidoglycan recognition protein 4##AF242518|PGLYRP4|57115|peptidoglycan recognition protein 4##BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3##BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3##NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3##BC108290|LOR|4014|loricrin##NM_000427|LOR|4014|loricrin##AK311882|S100A9|6280|S100 calcium binding protein A9##NM_002965|S100A9|6280|S100 calcium binding protein A9##X06233|S100A9|6280|S100 calcium binding protein A9##BC047681|S100A9|6280|S100 calcium binding protein A9##AF086362|S100A9|6280|S100 calcium binding protein A9##X97859|S100A12|6283|S100 calcium binding protein A12##BC070294|S100A12|6283|S100 calcium binding protein A12##D83664|S100A12|6283|S100 calcium binding protein A12##NM_005621|S100A12|6283|S100 calcium binding protein A12##Y00278|S100A8|6279|S100 calcium binding protein A8##AK291328|S100A8|6279|S100 calcium binding protein A8##X06234|S100A8|6279|S100 calcium binding protein A8##NM_002964|S100A8|6279|S100 calcium binding protein A8	0.824431	CTCF.p2:-16:0.824
chr1	224521139	224521288	reg1013269.p1	10.166	+	TSC_hg19_v1_chr1_-_224517875 BC012105 AK298244 AK297396 AK298826 AK293923 AK297070 BC005897 U78772 U68140 NM_001243146 NM_001243147 NM_002533 NM_206840	-3361	-	TSC_hg19_v1_chr1_+_224370941 AK308232 AF466375 AY423730 AF002668 CU674476	-150226	+	TSC_hg19_v1_chr1_+_224370925 BC000961 NM_003676	-150291	+	TSC_hg19_v1_chr1_+_224544588 AL136930 AK289973 AK312064 BC039037	23356	+	TSC_hg19_v1_chr1_+_224544594 AF161512 NM_014184	23379	+	BC000573 TSC_hg19_v1_chr1_+_224544609 AK222634 BX649076 AM392966 AM393151 AM393502 DQ891901 DQ895087	23398	+	BC012105|NVL|4931|nuclear VCP-like##AK298244|NVL|4931|nuclear VCP-like##AK297396|NVL|4931|nuclear VCP-like##AK298826|NVL|4931|nuclear VCP-like##AK293923|NVL|4931|nuclear VCP-like##AK297070|NVL|4931|nuclear VCP-like##BC005897|NVL|4931|nuclear VCP-like##U78772|NVL|4931|nuclear VCP-like##U68140|NVL|4931|nuclear VCP-like##NM_001243146|NVL|4931|nuclear VCP-like##NM_001243147|NVL|4931|nuclear VCP-like##NM_002533|NVL|4931|nuclear VCP-like##NM_206840|NVL|4931|nuclear VCP-like##AK308232|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF466375|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AY423730|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF002668|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##BC000961|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_003676|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AL136930|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK289973|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK312064|CNIH4|29097|cornichon homolog 4 (Drosophila)##BC039037|CNIH4|29097|cornichon homolog 4 (Drosophila)##AF161512|CNIH4|29097|cornichon homolog 4 (Drosophila)##NM_014184|CNIH4|29097|cornichon homolog 4 (Drosophila)##BC000573|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK222634|CNIH4|29097|cornichon homolog 4 (Drosophila)##BX649076|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM392966|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM393151|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM393502|CNIH4|29097|cornichon homolog 4 (Drosophila)##DQ891901|CNIH4|29097|cornichon homolog 4 (Drosophila)##DQ895087|CNIH4|29097|cornichon homolog 4 (Drosophila)	0.385136	CTCF.p2:13:0.385
chr1	3692606	3692737	reg1012956.p1	10.166	+	TSC_hg19_v1_chr1_+_3689334 BC042129 NM_001163724	-3335	+	AK057387 BC112112 NM_152492 BC112108	-23708	+	TSC_hg19_v1_chr1_-_3663940 AB007964 BC035073 BC062467 BC089039	-28754	-	TSC_hg19_v1_chr1_-_3713056 BC031301 NM_020710	20395	-	TSC_hg19_v1_chr1_-_3773757 AB011134 AK308191	81017	-	TSC_hg19_v1_chr1_-_3773776 BC001640 BC047450 BC026020 BC050721 NM_014704	81113	-	BC042129|LOC388588|388588|uncharacterized protein LOC388588##NM_001163724|LOC388588|388588|uncharacterized protein LOC388588##AK057387|CCDC27|148870|coiled-coil domain containing 27##BC112112|CCDC27|148870|coiled-coil domain containing 27##NM_152492|CCDC27|148870|coiled-coil domain containing 27##BC112108|CCDC27|148870|coiled-coil domain containing 27##AB007964|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC035073|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC089039|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC031301|LRRC47|57470|leucine rich repeat containing 47##NM_020710|LRRC47|57470|leucine rich repeat containing 47##AB011134|CEP104|9731|centrosomal protein 104kDa##AK308191|CEP104|9731|centrosomal protein 104kDa##BC001640|CEP104|9731|centrosomal protein 104kDa##BC047450|CEP104|9731|centrosomal protein 104kDa##BC026020|CEP104|9731|centrosomal protein 104kDa##BC050721|CEP104|9731|centrosomal protein 104kDa##NM_014704|CEP104|9731|centrosomal protein 104kDa	0.0	
chr9	139962300	139962420	reg1010243.p1	10.166	+	AF144748 EF495152 CU690182 DQ892410 DQ895623 U91510 BC035738 NM_001246 NM_203468	-13885	-	TSC_hg19_v1_chr9_-_139940630 AF327349 AK074793 AF285836 NM_015392	-21721	-	TSC_hg19_v1_chr9_-_139940559 BC004217	-21798	-	TSC_hg19_v1_chr9_-_139965024 BC048267 NM_178448 DQ150361	2673	-	TSC_hg19_v1_chr9_+_139971968 NM_207309	9593	+	AL832421 TSC_hg19_v1_chr9_+_139972236 AK095393 BC106035	9880	+	AF144748|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##EF495152|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##DQ892410|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##DQ895623|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##U91510|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##BC035738|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##NM_001246|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##NM_203468|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##AF327349|NPDC1|56654|neural proliferation, differentiation and control, 1##AK074793|NPDC1|56654|neural proliferation, differentiation and control, 1##AF285836|NPDC1|56654|neural proliferation, differentiation and control, 1##NM_015392|NPDC1|56654|neural proliferation, differentiation and control, 1##BC004217|NPDC1|56654|neural proliferation, differentiation and control, 1##BC048267|C9orf140|89958|chromosome 9 open reading frame 140##NM_178448|C9orf140|89958|chromosome 9 open reading frame 140##DQ150361|C9orf140|89958|chromosome 9 open reading frame 140##NM_207309|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1##AL832421|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1##AK095393|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1##BC106035|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	0.482964	CTCF.p2:-3:0.470
chr12	51818907	51819019	reg1011100.p2	10.165	+	TSC_hg19_v1_chr12_+_51818698 BC025994 AF069512 AF107099 CU693092 AL831915	-179	+	AK299545 TSC_hg19_v1_chr12_+_51818596 NM_001039960 NM_004858 DQ063579	-365	+	TSC_hg19_v1_chr12_+_51785519 AK128321	-33442	+	TSC_hg19_v1_chr12_+_51985016 AB027567 NM_014191	166054	+	NM_001177984 AF225988 FJ611941	237611	+	AK129980 NM_001013690	406737	-	BC025994|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AF069512|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AF107099|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AL831915|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AK299545|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##NM_001039960|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##NM_004858|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ063579|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AK128321|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AB027567|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##NM_014191|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##AK129980|FIGNL2|401720|fidgetin-like 2##NM_001013690|FIGNL2|401720|fidgetin-like 2	0.991225	CTCF.p2:-1:0.991
chr1	156862159	156862315	reg1012398.p1	10.164	+	M23102 TSC_hg19_v1_chr1_+_156830655 BC136554 BC144239 NM_001012331 NM_002529 AK290759 AK312704 BC062580	-31571	+	AF064078 AK310760 NM_014215	-33549	-	AB528908 EU832614 EU832686 AF097744 AK222737 AY763100 AF051325 AJ000553 AY763099 BC012107 AK313706 NM_001161441 NM_001161442 NM_001161444 NM_003975	-75668	-	NM_001080471	1285	+	AK292342 NM_144702 BC033790	28195	+	BC057394 NM_014784 NM_198236	152924	-	M23102|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC136554|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC144239|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001012331|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_002529|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK290759|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK312704|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC062580|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AF064078|INSRR|3645|insulin receptor-related receptor##AK310760|INSRR|3645|insulin receptor-related receptor##NM_014215|INSRR|3645|insulin receptor-related receptor##EU832614|SH2D2A|9047|SH2 domain containing 2A##EU832686|SH2D2A|9047|SH2 domain containing 2A##AF097744|SH2D2A|9047|SH2 domain containing 2A##AK222737|SH2D2A|9047|SH2 domain containing 2A##AY763100|SH2D2A|9047|SH2 domain containing 2A##AF051325|SH2D2A|9047|SH2 domain containing 2A##AJ000553|SH2D2A|9047|SH2 domain containing 2A##AY763099|SH2D2A|9047|SH2 domain containing 2A##BC012107|SH2D2A|9047|SH2 domain containing 2A##AK313706|SH2D2A|9047|SH2 domain containing 2A##NM_001161441|SH2D2A|9047|SH2 domain containing 2A##NM_001161442|SH2D2A|9047|SH2 domain containing 2A##NM_001161444|SH2D2A|9047|SH2 domain containing 2A##NM_003975|SH2D2A|9047|SH2 domain containing 2A##NM_001080471|PEAR1|375033|platelet endothelial aggregation receptor 1##AK292342|LRRC71|149499|leucine rich repeat containing 71##NM_144702|LRRC71|149499|leucine rich repeat containing 71##BC033790|LRRC71|149499|leucine rich repeat containing 71##BC057394|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_014784|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_198236|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11	0.894287	CTCF.p2:1:0.894
chr13	77554357	77554482	reg1010134.p1	10.164	+	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	-93812	-	BC013764 TSC_hg19_v1_chr13_-_77460431	-94019	-	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-1219579	+	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	11750	+	TSC_hg19_v1_chr13_-_77601295 AL833187 BC063796 BC072448	46863	-	TSC_hg19_v1_chr13_-_77601303 AK314442 NM_012158	46912	-	AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AL833187|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC063796|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC072448|FBXL3|26224|F-box and leucine-rich repeat protein 3##AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3	0.890686	CTCF.p2:2:0.891
chr17	19045875	19046040	reg1009283.p3	10.164	+	BC157869 NM_001129778	-15176	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-95671	-	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-137878	-	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	94751	+	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	220012	-	TSC_hg19_v1_chr17_+_19281077 NM_139032 NM_139033 BC007404 BC007992 U29725 AK295376	235233	+	BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1##NM_139032|MAPK7|5598|mitogen-activated protein kinase 7##NM_139033|MAPK7|5598|mitogen-activated protein kinase 7##BC007404|MAPK7|5598|mitogen-activated protein kinase 7##BC007992|MAPK7|5598|mitogen-activated protein kinase 7##U29725|MAPK7|5598|mitogen-activated protein kinase 7##AK295376|MAPK7|5598|mitogen-activated protein kinase 7	0.974404	CTCF.p2:-19:0.974
chr1	162006884	162006973	reg1010131.p1	10.163	+	AK316154 BC067274 NM_015441 TSC_hg19_v1_chr1_-_161993687	-13292	-	TSC_hg19_v1_chr1_+_161736145 BC014969 BC071997 AB208929 CU677145	-270792	+	AF005887 AK290498 TSC_hg19_v1_chr1_+_161736109	-270818	+	TSC_hg19_v1_chr1_+_162039485 BC041382 AB007933 NM_001164757 NM_014697	32596	+	AY841899 NM_001126060	325844	+	AB463503 CU689584 AY248900 BC032957 NM_182581	339683	-	AK316154|OLFML2B|25903|olfactomedin-like 2B##BC067274|OLFML2B|25903|olfactomedin-like 2B##NM_015441|OLFML2B|25903|olfactomedin-like 2B##BC014969|ATF6|22926|activating transcription factor 6##BC071997|ATF6|22926|activating transcription factor 6##AB208929|ATF6|22926|activating transcription factor 6##AF005887|ATF6|22926|activating transcription factor 6##AK290498|ATF6|22926|activating transcription factor 6##BC041382|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AB007933|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_001164757|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_014697|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AY841899|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_001126060|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AY248900|C1orf111|284680|chromosome 1 open reading frame 111##BC032957|C1orf111|284680|chromosome 1 open reading frame 111##NM_182581|C1orf111|284680|chromosome 1 open reading frame 111	0.836462	CTCF.p2:-11:0.836
chrX	130927220	130927396	reg1007810.p4	10.163	+	BC137050 AB529233 NM_001004486	-249310	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-503896	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-504046	-	TSC_hg19_v1_chrX_-_130964633 AK097911	37343	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	230013	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	230332	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.101301	
chr12	56132702	56132828	reg1011328.p2	10.162	+	TSC_hg19_v1_chr12_-_56122865 NM_001040034 NM_001780	-9891	-	TSC_hg19_v1_chr12_-_56122819 BC002349	-9953	-	AK311893 TSC_hg19_v1_chr12_-_56122794	-9972	-	NM_005811 AF100907 AF028333	4357	+	AB463939 AF486281 TSC_hg19_v1_chr12_-_56211499	78727	-	TSC_hg19_v1_chr12_-_56211507 AF161434 BC007099 BC093051 AK222719 AK290508	78741	-	NM_001040034|CD63|967|CD63 molecule##NM_001780|CD63|967|CD63 molecule##BC002349|CD63|967|CD63 molecule##AK311893|CD63|967|CD63 molecule##NM_005811|GDF11|10220|growth differentiation factor 11##AF100907|GDF11|10220|growth differentiation factor 11##AF028333|GDF11|10220|growth differentiation factor 11##AF486281|SARNP|84324|SAP domain containing ribonucleoprotein##AF161434|SARNP|84324|SAP domain containing ribonucleoprotein##BC007099|SARNP|84324|SAP domain containing ribonucleoprotein##BC093051|SARNP|84324|SAP domain containing ribonucleoprotein##AK222719|SARNP|84324|SAP domain containing ribonucleoprotein##AK290508|SARNP|84324|SAP domain containing ribonucleoprotein	0.914408	CTCF.p2:-6:0.914
chr15	45497464	45497575	reg1010582.p1	10.162	+	AK096267 NM_138356	-4147	-	TSC_hg19_v1_chr15_-_45480165 AK094391 AK303749	-17355	-	AK290372 AF213465 NM_017434 NM_175940 AK075268 AF230495 BC114628 BC114938	-75353	+	AK222709 NM_004212 U84392 AK291974	46922	+	TSC_hg19_v1_chr15_-_45670743 CU678590 S68805 BC004141 AK098055 AK223585 AK294995 AK298350	173220	-	TSC_hg19_v1_chr15_-_45670958 NM_001482	173448	-	AK096267|SHF|90525|Src homology 2 domain containing F##NM_138356|SHF|90525|Src homology 2 domain containing F##AK094391|SHF|90525|Src homology 2 domain containing F##AK303749|SHF|90525|Src homology 2 domain containing F##AK290372|DUOX1|53905|dual oxidase 1##AF213465|DUOX1|53905|dual oxidase 1##NM_017434|DUOX1|53905|dual oxidase 1##NM_175940|DUOX1|53905|dual oxidase 1##AK075268|DUOX1|53905|dual oxidase 1##AF230495|DUOX1|53905|dual oxidase 1##BC114628|DUOX1|53905|dual oxidase 1##BC114938|DUOX1|53905|dual oxidase 1##AK222709|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##NM_004212|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##U84392|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK291974|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	0.936585	CTCF.p2:5:0.937
chr17	32106262	32106385	reg1011076.p1	10.162	+	AL834182 NM_183377	-486318	-	AF216311 NM_173847 BC100886 BC100887	-787421	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-851120	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	377364	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	476008	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	490950	+	AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7	0.990971	CTCF.p2:-7:0.991
chr2	15777552	15777656	reg1009567.p1	10.161	+	TSC_hg19_v1_chr2_+_15732004 AB593034 AB593033 AB593031 AK297432 AK298426 BC053673 BC012132 AB593032 AK298212 BC012739 AK313933 EF418570 EF418571 AB527788	-45579	+	NM_004939 X70649	-45835	+	TSC_hg19_v1_chr2_-_15701451 BC108693 AF388385 BC131735 NM_015909 AB621813	-76146	-	M55330 TSC_hg19_v1_chr2_+_16080569	302960	+	TSC_hg19_v1_chr2_+_16080676 AK298225 NM_005378 AF320053 AK299495	303084	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	304169	-	AB593034|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593033|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593031|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK297432|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK298426|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC053673|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC012132|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593032|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK298212|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC012739|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK313933|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##EF418570|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##EF418571|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##NM_004939|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##X70649|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC108693|NBAS|51594|neuroblastoma amplified sequence##AF388385|NBAS|51594|neuroblastoma amplified sequence##BC131735|NBAS|51594|neuroblastoma amplified sequence##NM_015909|NBAS|51594|neuroblastoma amplified sequence##AB621813|NBAS|51594|neuroblastoma amplified sequence##M55330|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##AK298225|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##NM_005378|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##AF320053|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##AK299495|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)	0.913638	CTCF.p2:-21:0.817
chr12	31806232	31806366	reg1011168.p1	10.160	+	AK290248 NM_001135864	-6206	+	TSC_hg19_v1_chr12_-_31743924 BC068580 NM_144973	-62381	-	BC000024 NM_001135811 NM_021238 TSC_hg19_v1_chr12_-_31479121 NM_001135812	-327160	-	BC039535 NM_173802	5821	+	NM_001135863 TSC_hg19_v1_chr12_+_31812621 AL832339 BC039107	6315	+	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	75675	-	AK290248|METTL20|254013|methyltransferase like 20##NM_001135864|METTL20|254013|methyltransferase like 20##BC068580|DENND5B|160518|DENN/MADD domain containing 5B##NM_144973|DENND5B|160518|DENN/MADD domain containing 5B##BC000024|FAM60A|58516|family with sequence similarity 60, member A##NM_001135811|FAM60A|58516|family with sequence similarity 60, member A##NM_021238|FAM60A|58516|family with sequence similarity 60, member A##NM_001135812|FAM60A|58516|family with sequence similarity 60, member A##BC039535|METTL20|254013|methyltransferase like 20##NM_173802|METTL20|254013|methyltransferase like 20##NM_001135863|METTL20|254013|methyltransferase like 20##AL832339|METTL20|254013|methyltransferase like 20##BC039107|METTL20|254013|methyltransferase like 20##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)	0.988739	CTCF.p2:-3:0.989
chr15	59821208	59821352	reg1012667.p1	10.160	+	TSC_hg19_v1_chr15_+_59730403 BC022537 NM_152450 AK299220 AK307975	-90930	+	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	-156210	-	TSC_hg19_v1_chr15_-_59665065 AK291688	-156214	-	TSC_hg19_v1_chr15_+_59903981 NM_004751 EF152283	82703	+	TSC_hg19_v1_chr15_+_59904093 BC017032	82826	+	TSC_hg19_v1_chr15_+_59908724 AF102542	87475	+	BC022537|FAM81A|145773|family with sequence similarity 81, member A##NM_152450|FAM81A|145773|family with sequence similarity 81, member A##AK299220|FAM81A|145773|family with sequence similarity 81, member A##AK307975|FAM81A|145773|family with sequence similarity 81, member A##BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##NM_004751|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##EF152283|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##BC017032|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##AF102542|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type	0.596811	CTCF.p2:11:0.583
chr4	86718208	86718298	reg1009803.p2	10.160	+	BC098580 TSC_hg19_v1_chr4_+_86699865 AK098193	-18355	+	TSC_hg19_v1_chr4_+_86699850 NM_001042669	-18405	+	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	-321910	+	AK307423 TSC_hg19_v1_chr4_+_86749064	30801	+	AL136646 NM_031305	133172	+	AK057723 NM_138981	310552	-	BC098580|ARHGAP24|83478|Rho GTPase activating protein 24##AK098193|ARHGAP24|83478|Rho GTPase activating protein 24##NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24##NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24##AK307423|ARHGAP24|83478|Rho GTPase activating protein 24##AL136646|ARHGAP24|83478|Rho GTPase activating protein 24##NM_031305|ARHGAP24|83478|Rho GTPase activating protein 24##AK057723|MAPK10|5602|mitogen-activated protein kinase 10##NM_138981|MAPK10|5602|mitogen-activated protein kinase 10	0.901498	CTCF.p2:5:0.901
chr1	38484707	38484822	reg1009733.p1	10.159	+	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-6334	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-6379	+	TSC_hg19_v1_chr1_-_38471187 BC014501 BC001351 BC011697 AK309179 AK290641 NM_001243878 NM_004468	-13531	-	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	27685	-	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	840622	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	854252	-	AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC014501|FHL3|2275|four and a half LIM domains 3##BC001351|FHL3|2275|four and a half LIM domains 3##BC011697|FHL3|2275|four and a half LIM domains 3##AK309179|FHL3|2275|four and a half LIM domains 3##AK290641|FHL3|2275|four and a half LIM domains 3##NM_001243878|FHL3|2275|four and a half LIM domains 3##NM_004468|FHL3|2275|four and a half LIM domains 3##L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein	0.876375	CTCF.p2:-2:0.876
chr15	94870715	94870865	reg1013332.p1	10.159	+	NM_001159643 NM_018349 AY656717 BC131527	-29329	+	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	-95932	+	AB463222 AM392685 BC146682 AK074980 BC140838 BC151132 AL136826 TSC_hg19_v1_chr15_-_93632430 AK074910 AK291365 NM_020211	-1238437	-	NM_001159644 BC025708 BC111024 AK002037	28519	+	TSC_hg19_v1_chr15_-_95870310 BC040875	999529	-	BC106083 NM_001145155 FM208183	1998371	+	NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##AM392685|RGMA|56963|RGM domain family, member A##BC146682|RGMA|56963|RGM domain family, member A##AK074980|RGMA|56963|RGM domain family, member A##BC140838|RGMA|56963|RGM domain family, member A##BC151132|RGMA|56963|RGM domain family, member A##AL136826|RGMA|56963|RGM domain family, member A##AK074910|RGMA|56963|RGM domain family, member A##NM_020211|RGMA|56963|RGM domain family, member A##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##BC040875|LOC400456|400456|uncharacterized LOC400456##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.824072	CTCF.p2:-13:0.824
chrX	117131011	117131132	reg1012326.p1	10.159	+	AK296324 NM_001168299	-11743	-	AK125356 NM_033495 NM_001168300	-23342	-	BC062223 NM_001017978 AK000618 AK026566	-1536922	-	AL591986 TSC_hg19_v1_chrX_-_117250764 AK316509 NM_001168302 NM_001168303	119654	-	AK302713 NM_001168301	120231	-	TSC_hg19_v1_chrX_+_117480068 NM_001184965 NM_001184966 NM_019045 AK127556 BX537578 AL833605 BX538087 AK299711 BC028697 BX648150	349094	+	AK296324|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)##AK125356|KLHL13|90293|kelch-like 13 (Drosophila)##NM_033495|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168300|KLHL13|90293|kelch-like 13 (Drosophila)##BC062223|CXorf61|203413|chromosome X open reading frame 61##NM_001017978|CXorf61|203413|chromosome X open reading frame 61##AK000618|CXorf61|203413|chromosome X open reading frame 61##AK026566|CXorf61|203413|chromosome X open reading frame 61##AL591986|KLHL13|90293|kelch-like 13 (Drosophila)##AK316509|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)##AK302713|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168301|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001184965|WDR44|54521|WD repeat domain 44##NM_001184966|WDR44|54521|WD repeat domain 44##NM_019045|WDR44|54521|WD repeat domain 44##AK127556|WDR44|54521|WD repeat domain 44##BX537578|WDR44|54521|WD repeat domain 44##AL833605|WDR44|54521|WD repeat domain 44##BX538087|WDR44|54521|WD repeat domain 44##AK299711|WDR44|54521|WD repeat domain 44##BC028697|WDR44|54521|WD repeat domain 44##BX648150|WDR44|54521|WD repeat domain 44	0.0	
chr7	50700745	50700871	reg1012941.p1	10.158	+	M88700 TSC_hg19_v1_chr7_-_50633103 AK298392 NM_001082971	-67711	-	AJ310724 BC000485 BC008366 M76180 AK298321 NM_000790 NM_001242886 NM_001242887 NM_001242888 NM_001242889 NM_001242890 TSC_hg19_v1_chr7_-_50628769	-72049	-	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	-182754	-	NM_001001550 U66065 U69276	72189	-	AF000017 AB000731 AF001534 NM_001001549 NM_005311 U34355	99225	-	D86962 TSC_hg19_v1_chr7_-_50860699	159881	-	M88700|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298392|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001082971|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AJ310724|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC000485|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC008366|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##M76180|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298321|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_000790|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242886|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242887|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242888|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242889|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242890|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1##NM_001001550|GRB10|2887|growth factor receptor-bound protein 10##U66065|GRB10|2887|growth factor receptor-bound protein 10##U69276|GRB10|2887|growth factor receptor-bound protein 10##AF000017|GRB10|2887|growth factor receptor-bound protein 10##AB000731|GRB10|2887|growth factor receptor-bound protein 10##AF001534|GRB10|2887|growth factor receptor-bound protein 10##NM_001001549|GRB10|2887|growth factor receptor-bound protein 10##NM_005311|GRB10|2887|growth factor receptor-bound protein 10##U34355|GRB10|2887|growth factor receptor-bound protein 10##D86962|GRB10|2887|growth factor receptor-bound protein 10	0.976085	CTCF.p2:-13:0.976
chrX	139139230	139139359	reg1012737.p1	10.158	+	BC137148 BC137149 NM_001013403	-91618	-	BC132728 BC132730 AJ580093 AJ580094 NM_001010986 NM_173694	-224879	-	AK302957 AK316416 NM_001099855 NM_001171876	-348940	-	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	447958	-	TSC_hg19_v1_chrX_+_139791923 AK054978	652633	+	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	727358	-	BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##BC132728|ATP11C|286410|ATPase, class VI, type 11C##BC132730|ATP11C|286410|ATPase, class VI, type 11C##AJ580093|ATP11C|286410|ATPase, class VI, type 11C##AJ580094|ATP11C|286410|ATPase, class VI, type 11C##NM_001010986|ATP11C|286410|ATPase, class VI, type 11C##NM_173694|ATP11C|286410|ATPase, class VI, type 11C##AK302957|MCF2|4168|MCF.2 cell line derived transforming sequence##AK316416|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001099855|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171876|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	0.989667	CTCF.p2:0:0.990
chr15	96870568	96870713	reg1013146.p1	10.157	+	BC106083 NM_001145155 FM208183	-1479	+	TSC_hg19_v1_chr15_-_95870310 BC040875	-1000321	-	NM_001159644 BC025708 BC111024 AK002037	-1971331	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	3337	+	AK316086 NM_001145156	5153	+	NM_001145157	5928	+	BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC040875|LOC400456|400456|uncharacterized LOC400456##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.917489	CTCF.p2:1:0.917
chr20	23031522	23031620	reg1009095.p1	10.157	+	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	-1333	-	TSC_hg19_v1_chr20_+_23015949 BC117270 BC117272 NM_001052 BC069063	-15537	+	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	-465469	-	TSC_hg19_v1_chr20_-_23062805 AK056764	31241	-	AB527124 AM393282 AM393752 DQ891055 DQ894234 TSC_hg19_v1_chr20_-_23066962 AJ295142 AB209895 BC028075 AK299957 NM_012072 U94333	35362	-	BC003410 NM_013248 TSC_hg19_v1_chr20_+_23331435 AK026360 BC000759 BC003029 AF156957 BC002687	299873	+	BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##BC117270|SSTR4|6754|somatostatin receptor 4##BC117272|SSTR4|6754|somatostatin receptor 4##NM_001052|SSTR4|6754|somatostatin receptor 4##BC069063|SSTR4|6754|somatostatin receptor 4##AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2##AK056764|CD93|22918|CD93 molecule##AM393282|CD93|22918|CD93 molecule##AM393752|CD93|22918|CD93 molecule##DQ891055|CD93|22918|CD93 molecule##DQ894234|CD93|22918|CD93 molecule##AJ295142|CD93|22918|CD93 molecule##AB209895|CD93|22918|CD93 molecule##BC028075|CD93|22918|CD93 molecule##AK299957|CD93|22918|CD93 molecule##NM_012072|CD93|22918|CD93 molecule##U94333|CD93|22918|CD93 molecule##BC003410|NXT1|29107|NTF2-like export factor 1##NM_013248|NXT1|29107|NTF2-like export factor 1##AK026360|NXT1|29107|NTF2-like export factor 1##BC000759|NXT1|29107|NTF2-like export factor 1##BC003029|NXT1|29107|NTF2-like export factor 1##AF156957|NXT1|29107|NTF2-like export factor 1##BC002687|NXT1|29107|NTF2-like export factor 1	0.548281	CTCF.p2:-2:0.548
chr10	95112528	95112650	reg1009838.p2	10.156	+	AK075374 NM_000783 AF005418	-278933	+	AK027560 NM_057157	-279358	+	AY356349 NM_183374	-291569	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	129459	-	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	143799	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	213920	+	AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1	0.999735	CTCF.p2:1:1.000
chr1	115595237	115595352	reg1009515.p1	10.156	+	NM_000549	-22880	+	NM_003176 BC026162 AK315268 AF273043 BC105299 BC126266 BC144019 BC144020 BC065190 X95654	-197782	+	TSC_hg19_v1_chr1_-_115323268 BC005934 AK024821 AK225734 CR749219 CR936771 AK126316 NM_001102396 NM_025073	-271999	-	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	36822	-	BC032517 NM_002506 X52599	285559	-	NM_001172411 NM_138959 BC065272 AF481859	589298	+	NM_000549|TSHB|7252|thyroid stimulating hormone, beta##NM_003176|SYCP1|6847|synaptonemal complex protein 1##BC026162|SYCP1|6847|synaptonemal complex protein 1##AK315268|SYCP1|6847|synaptonemal complex protein 1##AF273043|SYCP1|6847|synaptonemal complex protein 1##BC105299|SYCP1|6847|synaptonemal complex protein 1##BC126266|SYCP1|6847|synaptonemal complex protein 1##BC144019|SYCP1|6847|synaptonemal complex protein 1##BC144020|SYCP1|6847|synaptonemal complex protein 1##BC065190|SYCP1|6847|synaptonemal complex protein 1##X95654|SYCP1|6847|synaptonemal complex protein 1##BC005934|SIKE1|80143|suppressor of IKBKE 1##AK024821|SIKE1|80143|suppressor of IKBKE 1##AK225734|SIKE1|80143|suppressor of IKBKE 1##CR749219|SIKE1|80143|suppressor of IKBKE 1##CR936771|SIKE1|80143|suppressor of IKBKE 1##AK126316|SIKE1|80143|suppressor of IKBKE 1##NM_001102396|SIKE1|80143|suppressor of IKBKE 1##NM_025073|SIKE1|80143|suppressor of IKBKE 1##AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)	0.970655	CTCF.p2:12:0.942
chr19	11241752	11241870	reg1010851.p1	10.156	+	TSC_hg19_v1_chr19_+_11200148 AB209409 BC014514 AY114155 AB384938 DQ893879 BT007361	-41626	+	TSC_hg19_v1_chr19_+_11200138 AK295612 AK296312 AK299038 AK300313	-41679	+	NM_000527 NM_001195798 NM_001195799 NM_001195800 NM_001195802 NM_001195803 TSC_hg19_v1_chr19_+_11200115	-41734	+	AY456387 TSC_hg19_v1_chr19_-_11266459 AK075287 AK303157 AK303266 BC105037 BC105039 NM_182513	24656	-	AB528156 AY639929 CU687364 NM_015493	63414	-	TSC_hg19_v1_chr19_-_11308222 BC082762 AB284125 NM_001136191	66447	-	AB209409|LDLR|3949|low density lipoprotein receptor##BC014514|LDLR|3949|low density lipoprotein receptor##AY114155|LDLR|3949|low density lipoprotein receptor##DQ893879|LDLR|3949|low density lipoprotein receptor##BT007361|LDLR|3949|low density lipoprotein receptor##AK295612|LDLR|3949|low density lipoprotein receptor##AK296312|LDLR|3949|low density lipoprotein receptor##AK299038|LDLR|3949|low density lipoprotein receptor##AK300313|LDLR|3949|low density lipoprotein receptor##NM_000527|LDLR|3949|low density lipoprotein receptor##NM_001195798|LDLR|3949|low density lipoprotein receptor##NM_001195799|LDLR|3949|low density lipoprotein receptor##NM_001195800|LDLR|3949|low density lipoprotein receptor##NM_001195802|LDLR|3949|low density lipoprotein receptor##NM_001195803|LDLR|3949|low density lipoprotein receptor##AY456387|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK075287|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK303157|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK303266|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC105037|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC105039|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_182513|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2##BC082762|KANK2|25959|KN motif and ankyrin repeat domains 2##AB284125|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_001136191|KANK2|25959|KN motif and ankyrin repeat domains 2	0.394719	CTCF.p2:7:0.395
chr6	171022311	171022491	reg1001530.p2	10.156	+	AY948416 AY948417 AB587415 DQ893475 DQ896345 TSC_hg19_v1_chr6_-_170893696 S78085 BC082978 AK297343 BC008378 NM_001199462 NM_001199463 NM_001199464 BC067759 NM_001199461 NM_002598 NM_144781	-128672	-	NM_001172085 NM_003194 AK304648 TSC_hg19_v1_chr6_+_170863459 AK315222 BC110341 Z22828 AK298272 M55654 BC109054 BC109053	-158937	+	TSC_hg19_v1_chr6_-_170862392 AK058050 NM_002793	-160004	-	None	None	None	None	None	None	None	None	None	AY948416|PDCD2|5134|programmed cell death 2##AY948417|PDCD2|5134|programmed cell death 2##DQ893475|PDCD2|5134|programmed cell death 2##DQ896345|PDCD2|5134|programmed cell death 2##S78085|PDCD2|5134|programmed cell death 2##AK297343|PDCD2|5134|programmed cell death 2##BC008378|PDCD2|5134|programmed cell death 2##NM_001199462|PDCD2|5134|programmed cell death 2##NM_001199463|PDCD2|5134|programmed cell death 2##NM_001199464|PDCD2|5134|programmed cell death 2##BC067759|PDCD2|5134|programmed cell death 2##NM_001199461|PDCD2|5134|programmed cell death 2##NM_002598|PDCD2|5134|programmed cell death 2##NM_144781|PDCD2|5134|programmed cell death 2##NM_001172085|TBP|6908|TATA box binding protein##NM_003194|TBP|6908|TATA box binding protein##AK304648|TBP|6908|TATA box binding protein##AK315222|TBP|6908|TATA box binding protein##BC110341|TBP|6908|TATA box binding protein##Z22828|TBP|6908|TATA box binding protein##AK298272|TBP|6908|TATA box binding protein##M55654|TBP|6908|TATA box binding protein##BC109054|TBP|6908|TATA box binding protein##BC109053|TBP|6908|TATA box binding protein##AK058050|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##NM_002793|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1	2.931006	CTCF.p2:0:0.977	CTCF.p2:-67:0.977	CTCF.p2:68:0.977
chrX	15705341	15705462	reg1010430.p1	10.156	+	BC014317 NM_020665	-22248	-	AK315144 NM_021804 AB193259	-85167	-	NM_001721	-179971	+	AB021660 AK291050 NM_007220	51000	+	BC113454 BC113480 NM_005089 TSC_hg19_v1_chrX_+_15808594 D49677 BC050451 BC065719 AK309673 HQ258575	103198	+	TSC_hg19_v1_chrX_-_15872876 AF251295	167475	-	BC014317|TMEM27|57393|transmembrane protein 27##NM_020665|TMEM27|57393|transmembrane protein 27##AK315144|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##NM_021804|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##AB193259|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##NM_001721|BMX|660|BMX non-receptor tyrosine kinase##AB021660|CA5B|11238|carbonic anhydrase VB, mitochondrial##AK291050|CA5B|11238|carbonic anhydrase VB, mitochondrial##NM_007220|CA5B|11238|carbonic anhydrase VB, mitochondrial##BC113454|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC113480|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##NM_005089|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##D49677|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC050451|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC065719|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AK309673|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##HQ258575|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	0.999066	CTCF.p2:1:0.999
chr1	174998999	174999119	reg1010758.p2	10.155	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-6488	-	TSC_hg19_v1_chr1_+_174969165 BC005865 AK294042 AF314752 BC022352 AL035305 AF057356 BC067823 BC078151 AF275803 AY423723	-29849	+	AK313278 TSC_hg19_v1_chr1_+_174969103	-29958	+	AK127044 NM_022093	37934	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	162971	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	713651	-	BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK294042|CACYBP|27101|calcyclin binding protein##AF314752|CACYBP|27101|calcyclin binding protein##BC022352|CACYBP|27101|calcyclin binding protein##AL035305|CACYBP|27101|calcyclin binding protein##AF057356|CACYBP|27101|calcyclin binding protein##BC067823|CACYBP|27101|calcyclin binding protein##BC078151|CACYBP|27101|calcyclin binding protein##AF275803|CACYBP|27101|calcyclin binding protein##AY423723|CACYBP|27101|calcyclin binding protein##AK313278|CACYBP|27101|calcyclin binding protein##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)	0.956192	CTCF.p2:0:0.956
chr18	3771462	3771590	reg1010446.p1	10.155	+	TSC_hg19_v1_chr18_+_3594077 AK093095 AX747919 BC137437	-177384	+	NM_173211	-317755	+	TSC_hg19_v1_chr18_+_3451599 NM_170695 NM_173210 AK307230 BC031268	-319895	+	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	73804	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	102758	-	AK294777 AK294717 NM_001242762 NM_001242763	103201	-	AK093095|FLJ35776|649446|uncharacterized LOC649446##BC137437|FLJ35776|649446|uncharacterized LOC649446##NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1##NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1##BC031268|TGIF1|7050|TGFB-induced factor homeobox 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	0.985169	CTCF.p2:-17:0.985
chr2	220024927	220025058	reg1009711.p1	10.155	+	BC136587 BC136588 NM_002181	-99755	-	AK127189 AK302678 AK302688 BC031585 NM_152389 NM_194302 BC047637	-118750	-	AF166331 NM_005209 BC006285 NM_057093 NM_057094	-166869	-	TSC_hg19_v1_chr2_-_220025558 BC012732 AK022672 AJ972687 BC030986 NM_024782	547	-	DQ891019 DQ894199 CU688862 AK091919 BC030243 AK298256 AK298277 AK055730 NM_001144889 NM_001144890 NM_144712	9769	-	CR457401 CU674686 AK311656 TSC_hg19_v1_chr2_-_220041648 BC001393 AK314975 AK075274 BC012821 AY007160 NM_015680	16635	-	BC136587|IHH|3549|Indian hedgehog##BC136588|IHH|3549|Indian hedgehog##NM_002181|IHH|3549|Indian hedgehog##AK127189|CCDC108|255101|coiled-coil domain containing 108##AK302678|CCDC108|255101|coiled-coil domain containing 108##AK302688|CCDC108|255101|coiled-coil domain containing 108##BC031585|CCDC108|255101|coiled-coil domain containing 108##NM_152389|CCDC108|255101|coiled-coil domain containing 108##NM_194302|CCDC108|255101|coiled-coil domain containing 108##BC047637|CCDC108|255101|coiled-coil domain containing 108##AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2##BC012732|NHEJ1|79840|nonhomologous end-joining factor 1##AK022672|NHEJ1|79840|nonhomologous end-joining factor 1##AJ972687|NHEJ1|79840|nonhomologous end-joining factor 1##BC030986|NHEJ1|79840|nonhomologous end-joining factor 1##NM_024782|NHEJ1|79840|nonhomologous end-joining factor 1##DQ891019|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##DQ894199|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##BC030243|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298256|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298277|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK055730|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144889|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144890|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_144712|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##CR457401|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC001393|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK314975|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK075274|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC012821|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AY007160|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##NM_015680|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1	0.994195	CTCF.p2:-21:0.994
chr7	150454064	150454188	reg1010009.p1	10.155	+	NM_001162367	-7303	+	TSC_hg19_v1_chr7_+_150434679 BC033688 BC011732	-19436	+	NM_018384 TSC_hg19_v1_chr7_+_150434485 AK002158 AK297881	-19651	+	TSC_hg19_v1_chr7_-_150497453 AK315575 AK000841 BC091471 AK129525 NM_001101311 NM_001101312 NM_001101314	43383	-	BC008303 TSC_hg19_v1_chr7_+_150497852 NM_018487 AF258340	43746	+	BC004358 BC014586 NM_014020 AK097304	44279	-	NM_001162367|LOC100128542|100128542|uncharacterized LOC100128542##BC033688|GIMAP5|55340|GTPase, IMAP family member 5##BC011732|GIMAP5|55340|GTPase, IMAP family member 5##NM_018384|GIMAP5|55340|GTPase, IMAP family member 5##AK002158|GIMAP5|55340|GTPase, IMAP family member 5##AK297881|GIMAP5|55340|GTPase, IMAP family member 5##AK315575|TMEM176B|28959|transmembrane protein 176B##AK000841|TMEM176B|28959|transmembrane protein 176B##BC091471|TMEM176B|28959|transmembrane protein 176B##AK129525|TMEM176B|28959|transmembrane protein 176B##NM_001101311|TMEM176B|28959|transmembrane protein 176B##NM_001101312|TMEM176B|28959|transmembrane protein 176B##NM_001101314|TMEM176B|28959|transmembrane protein 176B##BC008303|TMEM176A|55365|transmembrane protein 176A##NM_018487|TMEM176A|55365|transmembrane protein 176A##AF258340|TMEM176A|55365|transmembrane protein 176A##BC004358|TMEM176B|28959|transmembrane protein 176B##BC014586|TMEM176B|28959|transmembrane protein 176B##NM_014020|TMEM176B|28959|transmembrane protein 176B##AK097304|TMEM176B|28959|transmembrane protein 176B	0.888041	CTCF.p2:7:0.888
chr10	16870280	16870390	reg1010913.p2	10.154	+	TSC_hg19_v1_chr10_-_16859451 BC015644 BC005993 BC107898 BX647733 NM_012425 NM_152724	-10900	-	TSC_hg19_v1_chr10_-_16859397 AK225681 AK312520	-10941	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	-10976	-	AF034611 NM_001081 TSC_hg19_v1_chr10_-_17171878	301498	-	TSC_hg19_v1_chr10_-_17243660 CR450316 AF045888 AK291417 AF012128 BC047733 AK303428 BX537961 AJ223333 AK299027	373398	-	NM_004412	373734	-	BC015644|RSU1|6251|Ras suppressor protein 1##BC005993|RSU1|6251|Ras suppressor protein 1##BC107898|RSU1|6251|Ras suppressor protein 1##BX647733|RSU1|6251|Ras suppressor protein 1##NM_012425|RSU1|6251|Ras suppressor protein 1##NM_152724|RSU1|6251|Ras suppressor protein 1##AK225681|RSU1|6251|Ras suppressor protein 1##AK312520|RSU1|6251|Ras suppressor protein 1##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1##AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)##NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)##CR450316|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF045888|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK291417|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF012128|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##BC047733|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK303428|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##BX537961|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AJ223333|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK299027|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##NM_004412|TRDMT1|1787|tRNA aspartic acid methyltransferase 1	0.999478	CTCF.p2:-7:0.999
chr1	176344246	176344347	reg1009762.p1	10.154	+	AF527539 TSC_hg19_v1_chr1_-_176176377	-167920	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	-167927	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	-167978	-	AF342989 AF342990 BC062665 BC104644 NM_020318 NM_021936 BC152552	88016	+	BC142697 AB006627 BC146795 TSC_hg19_v1_chr1_-_177133827	789529	-	AK307820 AK295126 BC032870 BC049377 TSC_hg19_v1_chr1_-_177134004 NM_004319 NM_207108	789690	-	AF527539|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2##AF342989|PAPPA2|60676|pappalysin 2##AF342990|PAPPA2|60676|pappalysin 2##BC062665|PAPPA2|60676|pappalysin 2##BC104644|PAPPA2|60676|pappalysin 2##NM_020318|PAPPA2|60676|pappalysin 2##NM_021936|PAPPA2|60676|pappalysin 2##BC152552|PAPPA2|60676|pappalysin 2##BC142697|ASTN1|460|astrotactin 1##AB006627|ASTN1|460|astrotactin 1##BC146795|ASTN1|460|astrotactin 1##AK307820|ASTN1|460|astrotactin 1##AK295126|ASTN1|460|astrotactin 1##BC032870|ASTN1|460|astrotactin 1##BC049377|ASTN1|460|astrotactin 1##NM_004319|ASTN1|460|astrotactin 1##NM_207108|ASTN1|460|astrotactin 1	0.914964	CTCF.p2:7:0.915
chr12	106676291	106676390	reg1009895.p1	10.154	+	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	-34493	-	AB011109 BC152462 NM_014840	-142530	-	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	-143658	-	TSC_hg19_v1_chr12_+_106696595 BC033617 NM_152772 BC017872 AF306671 AF306858 AK314055	20232	+	NM_018082 TSC_hg19_v1_chr12_+_106751498 BX537447	75130	+	TSC_hg19_v1_chr12_+_106751589 BC046238 AK291635 AY092084	75237	+	BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4##AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC033617|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_152772|TCP11L2|255394|t-complex 11 (mouse)-like 2##BC017872|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306671|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306858|TCP11L2|255394|t-complex 11 (mouse)-like 2##AK314055|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BC046238|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AK291635|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AY092084|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	0.995391	CTCF.p2:16:0.995
chr19	49769763	49769876	reg1011710.p1	10.154	+	AK000048 TSC_hg19_v1_chr19_+_49669495	-100369	+	TSC_hg19_v1_chr19_+_49661048 AK074664 AF497623 AK292862 AY297044 AY297045 AY297046 AY046396 AJ575813 BC132727 BC144122 BC144123 AK295820	-108753	+	AK307897 NM_001195227 NM_017636 TSC_hg19_v1_chr19_+_49661029	-108806	+	BC034948 BC039336 NM_014037	58634	-	TSC_hg19_v1_chr19_+_49838662 AK301016	68839	+	TSC_hg19_v1_chr19_+_49838683 NM_001040031 NM_001774 AK301328	68859	+	AK000048|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AF497623|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK292862|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297044|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297045|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297046|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY046396|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AJ575813|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC132727|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144122|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144123|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK295820|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK307897|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_001195227|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_017636|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC034948|SLC6A16|28968|solute carrier family 6, member 16##NM_014037|SLC6A16|28968|solute carrier family 6, member 16##AK301016|CD37|951|CD37 molecule##NM_001040031|CD37|951|CD37 molecule##NM_001774|CD37|951|CD37 molecule##AK301328|CD37|951|CD37 molecule	0.694153	CTCF.p2:-22:0.694
chr12	6444925	6445069	reg1012183.p1	10.153	+	TSC_hg19_v1_chr12_-_6442970 AY182755	-2003	-	AK095373 NM_001144857	-23181	+	AK023741 NM_001144856	-24899	+	AB590201 EU176385 EU176726 CU679633 EU927389 M60275 TSC_hg19_v1_chr12_-_6451145	6065	-	M58286 TSC_hg19_v1_chr12_-_6451171 M33294 AK056611 AK298729 AK304517 M63121 AK308061 AK291088 BC010140 AK315509 NM_001065	6223	-	AK172792 NM_001159576 TSC_hg19_v1_chr12_-_6484414	39405	-	AY182755|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK095373|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144857|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AK023741|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144856|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##EU176385|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU176726|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU927389|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M60275|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M58286|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M33294|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK056611|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK298729|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK304517|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M63121|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK308061|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK291088|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##BC010140|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK315509|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##NM_001065|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK172792|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001159576|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha	0.017074	
chr22	27152705	27152834	reg1011884.p2	10.153	+	TSC_hg19_v1_chr22_+_27068725 AK026502	-84029	+	TSC_hg19_v1_chr22_+_27053392 AB263414 AB263415 AB263416 AB263417 AK098833	-99297	+	BC069404 CR456424 NM_001886 U59057 AB528112 CU012985 CU013273 BC096171 BC096172 BC096173 BC096174	-134838	+	TSC_hg19_v1_chr22_-_28197481 NM_002430 X82209	1044708	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	1162405	-	TSC_hg19_v1_chr22_-_28315203 BC031427	1162438	-	AK026502|LOC100507637|100507637|uncharacterized LOC100507637##AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##BC069404|CRYBA4|1413|crystallin, beta A4##CR456424|CRYBA4|1413|crystallin, beta A4##NM_001886|CRYBA4|1413|crystallin, beta A4##U59057|CRYBA4|1413|crystallin, beta A4##CU012985|CRYBA4|1413|crystallin, beta A4##CU013273|CRYBA4|1413|crystallin, beta A4##BC096171|CRYBA4|1413|crystallin, beta A4##BC096172|CRYBA4|1413|crystallin, beta A4##BC096173|CRYBA4|1413|crystallin, beta A4##BC096174|CRYBA4|1413|crystallin, beta A4##NM_002430|MN1|4330|meningioma (disrupted in balanced translocation) 1##X82209|MN1|4330|meningioma (disrupted in balanced translocation) 1##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta	0.601219	CTCF.p2:-6:0.601
chr11	72635757	72635876	reg1011062.p1	10.152	+	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-110334	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-110411	+	AB209473 AK095668 BC035482 BC007919 BC014033 AK310301 AK315255 NM_006645	-131120	-	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	217233	-	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	293528	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	293630	+	BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK095668|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC035482|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC007919|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC014033|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AK315255|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##NM_006645|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.529895	CTCF.p2:-5:0.530
chr12	97379367	97379473	reg1009923.p2	10.152	+	BC027605 NM_001135175	-78177	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-78389	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-585103	-	TSC_hg19_v1_chr12_-_98897622 AK126817	1518207	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	1529947	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	1529987	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.474698	CTCF.p2:4:0.475
chr19	13345504	13345637	reg1011528.p1	10.152	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-81390	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-84278	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-84431	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	271606	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	497009	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	513149	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.30889	CTCF.p2:4:0.309
chr3	137690156	137690272	reg1010122.p1	10.152	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	-207067	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-1013384	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-1040877	+	AK098474 NM_001002026 AF349452	27465	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	38789	+	AK057406 NM_001170538	142107	-	NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18##AK057406|DZIP1L|199221|DAZ interacting protein 1-like##NM_001170538|DZIP1L|199221|DAZ interacting protein 1-like	0.986952	CTCF.p2:10:0.987
chr3	16331960	16332085	reg1011384.p1	10.152	+	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-25314	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	-25633	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-115828	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	222996	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	223202	-	BX648638 AK303026 NM_001190811	314248	-	NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like	0.96692	CTCF.p2:-18:0.967
chr9	70401826	70401950	reg1013588.p1	10.152	+	NM_001126334	-223074	-	AL136793 NM_001098805	-1019908	+	AF265442 BC069006 AK293173 NM_001085457	-1139334	-	NM_001099279 NM_199244	27842	-	CU688346 TSC_hg19_v1_chr9_-_70490092	88193	-	AF265442 TSC_hg19_v1_chr9_-_70490099	88210	-	NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AF265442|CBWD5|220869|COBW domain containing 5	0.829185	CTCF.p2:6:0.829
chr13	39260140	39260287	reg1009647.p1	10.151	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	-336164	+	NM_016617 TSC_hg19_v1_chr13_+_38923946	-336262	+	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	-816315	-	NM_207361	959	+	DQ891676 EU176604 AK313632 BC025760 AK304159 NM_001144033 NM_145286	304713	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	351988	-	AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2##DQ891676|STOML3|161003|stomatin (EPB72)-like 3##EU176604|STOML3|161003|stomatin (EPB72)-like 3##AK313632|STOML3|161003|stomatin (EPB72)-like 3##BC025760|STOML3|161003|stomatin (EPB72)-like 3##AK304159|STOML3|161003|stomatin (EPB72)-like 3##NM_001144033|STOML3|161003|stomatin (EPB72)-like 3##NM_145286|STOML3|161003|stomatin (EPB72)-like 3##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1	0.875793	CTCF.p2:0:0.876
chr15	60652001	60652114	reg1010803.p2	10.151	+	TSC_hg19_v1_chr15_+_60296509 AK314075	-355508	+	EF565104 TSC_hg19_v1_chr15_+_60296453	-355608	+	AK290944 NM_012182 TSC_hg19_v1_chr15_+_60296425	-355629	+	AB587463 BC068065 BC009564 BC021114 BC052567 BC001388 BC013843 D00017 TSC_hg19_v1_chr15_-_60690186 AK222542 BX640598 AK297923 BC015834 BC023990 BC066955 BC093056 D28364 NM_001002857 NM_001002858 NM_001136015 NM_004039 AK309956 BC016774	38104	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	119217	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	232622	-	AK314075|FOXB1|27023|forkhead box B1##AK290944|FOXB1|27023|forkhead box B1##NM_012182|FOXB1|27023|forkhead box B1##BC068065|ANXA2|302|annexin A2##BC009564|ANXA2|302|annexin A2##BC021114|ANXA2|302|annexin A2##BC052567|ANXA2|302|annexin A2##BC001388|ANXA2|302|annexin A2##BC013843|ANXA2|302|annexin A2##D00017|ANXA2|302|annexin A2##AK222542|ANXA2|302|annexin A2##BX640598|ANXA2|302|annexin A2##AK297923|ANXA2|302|annexin A2##BC015834|ANXA2|302|annexin A2##BC023990|ANXA2|302|annexin A2##BC066955|ANXA2|302|annexin A2##BC093056|ANXA2|302|annexin A2##D28364|ANXA2|302|annexin A2##NM_001002857|ANXA2|302|annexin A2##NM_001002858|ANXA2|302|annexin A2##NM_001136015|ANXA2|302|annexin A2##NM_004039|ANXA2|302|annexin A2##BC016774|ANXA2|302|annexin A2##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A	0.961228	CTCF.p2:-4:0.961
chr6	75284648	75284786	reg1011928.p1	10.151	+	TSC_hg19_v1_chr6_+_74406033 AY149920	-878693	+	EF553520 TSC_hg19_v1_chr6_+_74405925 AY788891 BX641095	-878797	+	TSC_hg19_v1_chr6_+_74405882 AK095888	-878846	+	BC146868 U73778 NM_004370 NM_080645 TSC_hg19_v1_chr6_-_75915745	630938	-	TSC_hg19_v1_chr6_-_75915768 AK307558	631063	-	CR407646 CR542125 X15822 TSC_hg19_v1_chr6_-_75953494 BC101826 BC101828 AK312154	668762	-	AY149920|CD109|135228|CD109 molecule##EF553520|CD109|135228|CD109 molecule##AY788891|CD109|135228|CD109 molecule##BX641095|CD109|135228|CD109 molecule##AK095888|CD109|135228|CD109 molecule##BC146868|COL12A1|1303|collagen, type XII, alpha 1##U73778|COL12A1|1303|collagen, type XII, alpha 1##NM_004370|COL12A1|1303|collagen, type XII, alpha 1##NM_080645|COL12A1|1303|collagen, type XII, alpha 1##AK307558|COL12A1|1303|collagen, type XII, alpha 1##CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	0.456026	CTCF.p2:13:0.456
chr1	151940576	151940691	reg1012511.p1	10.150	+	AK289494 NM_053055	-58273	-	TSC_hg19_v1_chr1_-_151881988 BC065277	-58632	-	TSC_hg19_v1_chr1_-_151881935 AK314852 AJ313515 BC017339	-58706	-	M81457 TSC_hg19_v1_chr1_-_151966289 BC105786 M38591	25654	-	BC015973 AK291073 TSC_hg19_v1_chr1_-_151966307 D28387	25685	-	NM_002966	26080	-	AK289494|THEM4|117145|thioesterase superfamily member 4##NM_053055|THEM4|117145|thioesterase superfamily member 4##BC065277|THEM4|117145|thioesterase superfamily member 4##AK314852|THEM4|117145|thioesterase superfamily member 4##AJ313515|THEM4|117145|thioesterase superfamily member 4##BC017339|THEM4|117145|thioesterase superfamily member 4##M81457|S100A10|6281|S100 calcium binding protein A10##BC105786|S100A10|6281|S100 calcium binding protein A10##M38591|S100A10|6281|S100 calcium binding protein A10##BC015973|S100A10|6281|S100 calcium binding protein A10##AK291073|S100A10|6281|S100 calcium binding protein A10##D28387|S100A10|6281|S100 calcium binding protein A10##NM_002966|S100A10|6281|S100 calcium binding protein A10	0.110311	
chr5	59020463	59020586	reg1011421.p2	10.150	+	U50159 NM_006203 L20970	-138225	-	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	-367781	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	-448594	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	43824	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	43931	-	NM_001104631	169096	-	U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.927477	CTCF.p2:0:0.872
chr7	146942503	146942620	reg1011708.p1	10.150	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-1128677	+	NM_014141	-1129109	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-2409425	-	TSC_hg19_v1_chr7_+_148036552 CR933671	1094004	+	BC021251 NM_145304	1345095	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	1453379	+	AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##CR933671|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1	0.779395	CTCF.p2:13:0.779
chr1	210574042	210574160	reg1009395.p1	10.149	+	NM_001170580 BC051191	-71460	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	-71836	+	NM_001122834 NM_001170564 AK297193	-72505	+	AF078741 AF078742 BC113709 BC143599 TSC_hg19_v1_chr1_-_211307437 AJ001366 NM_002238 NM_172362	733284	-	TSC_hg19_v1_chr1_+_211432710 NM_001136223 NM_001136224 NM_001136225	858607	+	TSC_hg19_v1_chr1_+_211432726 AK131312	858626	+	NM_001170580|HHAT|55733|hedgehog acyltransferase##BC051191|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase##NM_001122834|HHAT|55733|hedgehog acyltransferase##NM_001170564|HHAT|55733|hedgehog acyltransferase##AK297193|HHAT|55733|hedgehog acyltransferase##AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_001136223|RCOR3|55758|REST corepressor 3##NM_001136224|RCOR3|55758|REST corepressor 3##NM_001136225|RCOR3|55758|REST corepressor 3##AK131312|RCOR3|55758|REST corepressor 3	0.178075	
chr5	43227836	43227952	reg1007022.p1	10.149	+	BC036422 NM_153361	-35568	+	AK057343 NM_003432 TSC_hg19_v1_chr5_+_43121669 AK310735 BC017923	-106210	+	TSC_hg19_v1_chr5_+_43121609 AK299315 AK307977	-106280	+	BC000297 BC082234 M15802 X66435 TSC_hg19_v1_chr5_-_43313515 AK095492 AK315593	85637	-	TSC_hg19_v1_chr5_-_43313581 NM_001098272 NM_002130	85702	-	TSC_hg19_v1_chr5_-_43397231 AK307307	169332	-	BC036422|NIM1|167359|serine/threonine-protein kinase NIM1##NM_153361|NIM1|167359|serine/threonine-protein kinase NIM1##AK057343|ZNF131|7690|zinc finger protein 131##NM_003432|ZNF131|7690|zinc finger protein 131##AK310735|ZNF131|7690|zinc finger protein 131##BC017923|ZNF131|7690|zinc finger protein 131##AK299315|ZNF131|7690|zinc finger protein 131##AK307977|ZNF131|7690|zinc finger protein 131##BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##M15802|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK307307|CCL28|56477|chemokine (C-C motif) ligand 28	0.964501	CTCF.p2:-10:0.965
chr3	188865942	188866034	reg1010680.p1	10.148	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-201018	+	NM_001167671 BC130584 BC144076	-922754	+	NM_005578 U49957	-935268	+	AK125682 NM_198485 BC101550 BC101552	23823	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	483271	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	641530	+	AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma##U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63	0.999521	CTCF.p2:1:1.000
chr5	156904078	156904198	reg1012185.p1	10.148	+	TSC_hg19_v1_chr5_+_156887210 AK026158 AK308830 AK309242	-16868	+	AK296972 NM_001099287 NM_001172292	-17112	+	TSC_hg19_v1_chr5_+_156820161 AK172724	-83950	+	AB462931 TSC_hg19_v1_chr5_-_157002728	98578	-	AF311317 AF326918 TSC_hg19_v1_chr5_-_157002784 Y13786 AK091464 AK308182 AX747000 NM_033274	98667	-	AB527685 TSC_hg19_v1_chr5_-_157079170	174990	-	AK026158|NIPAL4|348938|NIPA-like domain containing 4##AK308830|NIPAL4|348938|NIPA-like domain containing 4##AK309242|NIPAL4|348938|NIPA-like domain containing 4##AK296972|NIPAL4|348938|NIPA-like domain containing 4##NM_001099287|NIPAL4|348938|NIPA-like domain containing 4##NM_001172292|NIPAL4|348938|NIPA-like domain containing 4##AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF311317|ADAM19|8728|ADAM metallopeptidase domain 19##AF326918|ADAM19|8728|ADAM metallopeptidase domain 19##Y13786|ADAM19|8728|ADAM metallopeptidase domain 19##AK091464|ADAM19|8728|ADAM metallopeptidase domain 19##AK308182|ADAM19|8728|ADAM metallopeptidase domain 19##NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19	0.936464	CTCF.p2:0:0.936
chr8	124034758	124034893	reg1011292.p1	10.148	+	TSC_hg19_v1_chr8_+_123963651 EU446694 AB083653	-71126	+	TSC_hg19_v1_chr8_+_123794108 AB020661	-240722	+	BC042145 TSC_hg19_v1_chr8_+_123794000	-240831	+	BC002457 TSC_hg19_v1_chr8_-_124054522	19682	-	AY358818 TSC_hg19_v1_chr8_-_124054540 AK303826	19715	-	TSC_hg19_v1_chr8_-_124054594 NM_001134671 NM_024295	19794	-	EU446694|ZHX2|22882|zinc fingers and homeoboxes 2##AB083653|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##BC002457|DERL1|79139|Der1-like domain family, member 1##AY358818|DERL1|79139|Der1-like domain family, member 1##AK303826|DERL1|79139|Der1-like domain family, member 1##NM_001134671|DERL1|79139|Der1-like domain family, member 1##NM_024295|DERL1|79139|Der1-like domain family, member 1	0.804734	CTCF.p2:8:0.805
chr17	80258787	80258928	reg1012973.p1	10.147	+	TSC_hg19_v1_chr17_-_80231580 BC003558 BC015775 AK291758 AK295638 AK303365 NM_001893 NM_139062	-27277	-	TSC_hg19_v1_chr17_-_80231315 AB091044 AK296969	-27564	-	TSC_hg19_v1_chr17_-_80231267 AB209463 CU677441 CU678502 EU832350 EU832435 AB527595	-27604	-	BT006696 DQ890740 DQ892590 DQ893911 DQ895810 AK298096 AK310061 BC009293 BC013297 X06180 AK223465 AY935534 AY935535 AY935536 AY935537 AK310558 NM_006137	16567	-	TSC_hg19_v1_chr17_-_80291610 AK223068 BC017716	32756	-	AK312980 U77643 TSC_hg19_v1_chr17_-_80291643 AK223104	32789	-	BC003558|CSNK1D|1453|casein kinase 1, delta##BC015775|CSNK1D|1453|casein kinase 1, delta##AK291758|CSNK1D|1453|casein kinase 1, delta##AK295638|CSNK1D|1453|casein kinase 1, delta##AK303365|CSNK1D|1453|casein kinase 1, delta##NM_001893|CSNK1D|1453|casein kinase 1, delta##NM_139062|CSNK1D|1453|casein kinase 1, delta##AB091044|CSNK1D|1453|casein kinase 1, delta##AK296969|CSNK1D|1453|casein kinase 1, delta##AB209463|CSNK1D|1453|casein kinase 1, delta##EU832350|CSNK1D|1453|casein kinase 1, delta##EU832435|CSNK1D|1453|casein kinase 1, delta##BT006696|CD7|924|CD7 molecule##DQ890740|CD7|924|CD7 molecule##DQ892590|CD7|924|CD7 molecule##DQ893911|CD7|924|CD7 molecule##DQ895810|CD7|924|CD7 molecule##AK298096|CD7|924|CD7 molecule##AK310061|CD7|924|CD7 molecule##BC009293|CD7|924|CD7 molecule##BC013297|CD7|924|CD7 molecule##X06180|CD7|924|CD7 molecule##AK223465|CD7|924|CD7 molecule##AY935534|CD7|924|CD7 molecule##AY935535|CD7|924|CD7 molecule##AY935536|CD7|924|CD7 molecule##AY935537|CD7|924|CD7 molecule##AK310558|CD7|924|CD7 molecule##NM_006137|CD7|924|CD7 molecule##AK223068|SECTM1|6398|secreted and transmembrane 1##BC017716|SECTM1|6398|secreted and transmembrane 1##AK312980|SECTM1|6398|secreted and transmembrane 1##U77643|SECTM1|6398|secreted and transmembrane 1##AK223104|SECTM1|6398|secreted and transmembrane 1	0.997545	CTCF.p2:-11:0.998
chr10	97601786	97601917	reg1008798.p2	10.146	+	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	-86311	+	AJ133133 AJ133134 NM_001098175	-130316	+	BC068449 DQ278872 NM_001143973 NM_015631	-147952	-	AK294399 NM_001130446	65870	+	NM_001001732 NM_001159747 AK302377 BC075861	158013	+	TSC_hg19_v1_chr10_+_97803318 BC043175 NM_001134375 NM_001134376 NM_019084 AK092360 AK297264 AX747499	201530	+	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##BC068449|TCTN3|26123|tectonic family member 3##DQ278872|TCTN3|26123|tectonic family member 3##NM_001143973|TCTN3|26123|tectonic family member 3##NM_015631|TCTN3|26123|tectonic family member 3##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B##NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC043175|CCNJ|54619|cyclin J##NM_001134375|CCNJ|54619|cyclin J##NM_001134376|CCNJ|54619|cyclin J##NM_019084|CCNJ|54619|cyclin J##AK092360|CCNJ|54619|cyclin J##AK297264|CCNJ|54619|cyclin J	0.946315	CTCF.p2:18:0.946
chr1	51339373	51339526	reg1007147.p2	10.145	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	-450338	-	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-763911	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-764765	+	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	86128	-	TSC_hg19_v1_chr1_-_51425740 BC067100	86307	-	TSC_hg19_v1_chr1_-_51425796 AJ271408	86350	-	NM_032110|DMRTA2|63950|DMRT-like family A2##AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1##AJ271408|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.872423	CTCF.p2:2:0.872
chr2	179279517	179279643	reg1010852.p1	10.145	+	TSC_hg19_v1_chr2_+_179278403 BX538254	-1176	+	AK093902 AX748360 NM_145739	-94610	+	TSC_hg19_v1_chr2_+_179059238 AB208898 NM_001201480 NM_001201481 NM_001201482 NM_032523 BC052259 AK300389 AF323728 AF392448	-220356	+	AY251164 NM_001139518 TSC_hg19_v1_chr2_-_179315397 NM_001139517	35838	-	BT007243 CR533525 EU831635 EU831719 AB590648 CU679369 TSC_hg19_v1_chr2_-_179315881 AF072860 AF083033 AK223107 BC009470 AK296019 AL136615 AK290601 NM_003690	36276	-	DQ365827 NM_001042702	36582	+	AK093902|OSBPL6|114880|oxysterol binding protein-like 6##NM_145739|OSBPL6|114880|oxysterol binding protein-like 6##AB208898|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201480|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201481|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201482|OSBPL6|114880|oxysterol binding protein-like 6##NM_032523|OSBPL6|114880|oxysterol binding protein-like 6##BC052259|OSBPL6|114880|oxysterol binding protein-like 6##AK300389|OSBPL6|114880|oxysterol binding protein-like 6##AF323728|OSBPL6|114880|oxysterol binding protein-like 6##AF392448|OSBPL6|114880|oxysterol binding protein-like 6##AY251164|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_001139518|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_001139517|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##BT007243|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##CR533525|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##EU831635|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##EU831719|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AF072860|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AF083033|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK223107|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##BC009470|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK296019|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AL136615|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK290601|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_003690|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##DQ365827|DFNB59|494513|deafness, autosomal recessive 59##NM_001042702|DFNB59|494513|deafness, autosomal recessive 59	0.820593	CTCF.p2:3:0.821
chr16	25245163	25245279	reg1010947.p1	10.144	+	AB013456 AF067797 NM_001169 AK222975 AK222964	-16921	+	TSC_hg19_v1_chr16_+_25123102 AK025884 AK225271 AK291885 AK314409 BC014217 AF037601 CU674610 AL137283 CU676933	-122024	+	TSC_hg19_v1_chr16_+_25123062 NM_001032391 NM_016309 AK223364 AF151826 BC001214	-122160	+	BX648785 AK131342 NM_001012981 AK302399	23638	-	TSC_hg19_v1_chr16_-_25269141 AK303472	23984	-	AF105378 NM_006040	458125	+	AB013456|AQP8|343|aquaporin 8##AF067797|AQP8|343|aquaporin 8##NM_001169|AQP8|343|aquaporin 8##AK222975|AQP8|343|aquaporin 8##AK222964|AQP8|343|aquaporin 8##AK025884|LCMT1|51451|leucine carboxyl methyltransferase 1##AK225271|LCMT1|51451|leucine carboxyl methyltransferase 1##AK291885|LCMT1|51451|leucine carboxyl methyltransferase 1##AK314409|LCMT1|51451|leucine carboxyl methyltransferase 1##BC014217|LCMT1|51451|leucine carboxyl methyltransferase 1##AF037601|LCMT1|51451|leucine carboxyl methyltransferase 1##AL137283|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_001032391|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_016309|LCMT1|51451|leucine carboxyl methyltransferase 1##AK223364|LCMT1|51451|leucine carboxyl methyltransferase 1##AF151826|LCMT1|51451|leucine carboxyl methyltransferase 1##BC001214|LCMT1|51451|leucine carboxyl methyltransferase 1##BX648785|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK131342|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001012981|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK302399|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4	0.079869	
chr7	100323015	100323125	reg1009957.p2	10.144	+	NM_000799 X02157 BC093628 BC111937 BC143225 AB463610 JN849371	-4558	+	TSC_hg19_v1_chr7_+_100303755 NM_005837 BC001430 U94316	-19350	+	NM_022574	-36201	-	AF332975 AF332976 AF332977 AF332978 AF332979 AF332980 NM_003386 NM_173059	8178	+	TSC_hg19_v1_chr7_-_100425146 NM_004444	102022	-	TSC_hg19_v1_chr7_+_100450340 AK301411	127270	+	NM_000799|EPO|2056|erythropoietin##X02157|EPO|2056|erythropoietin##BC093628|EPO|2056|erythropoietin##BC111937|EPO|2056|erythropoietin##BC143225|EPO|2056|erythropoietin##JN849371|EPO|2056|erythropoietin##NM_005837|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##BC001430|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##U94316|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##NM_022574|GIGYF1|64599|GRB10 interacting GYF protein 1##AF332975|ZAN|7455|zonadhesin##AF332976|ZAN|7455|zonadhesin##AF332977|ZAN|7455|zonadhesin##AF332978|ZAN|7455|zonadhesin##AF332979|ZAN|7455|zonadhesin##AF332980|ZAN|7455|zonadhesin##NM_003386|ZAN|7455|zonadhesin##NM_173059|ZAN|7455|zonadhesin##NM_004444|EPHB4|2050|EPH receptor B4##AK301411|SLC12A9|56996|solute carrier family 12 (potassium/chloride transporters), member 9	0.959096	CTCF.p2:16:0.959
chr1	31255818	31255951	reg1007044.p2	10.143	+	TSC_hg19_v1_chr1_-_31230697 NM_006762	-25194	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	-25252	-	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	-59452	-	TSC_hg19_v1_chr1_-_31345363 AL049426	89514	-	AB385258 AF248634 NM_014654 TSC_hg19_v1_chr1_-_31381606	125664	-	TSC_hg19_v1_chr1_-_31538543 BC013398 D43951 AK291779 AK300457 AF315592 AK096476 AK222605	282633	-	NM_006762|LAPTM5|7805|lysosomal protein transmembrane 5##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##AL049426|SDC3|9672|syndecan 3##AF248634|SDC3|9672|syndecan 3##NM_014654|SDC3|9672|syndecan 3##BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)##D43951|PUM1|9698|pumilio homolog 1 (Drosophila)##AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)##AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)##AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)##AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)##AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)	0.0	
chr4	89580636	89580749	reg1010615.p2	10.143	+	AK296379 TSC_hg19_v1_chr4_+_89513611 AK289990 BC038960 D25215 NM_014606	-67071	+	TSC_hg19_v1_chr4_-_89444931 NM_001042616 NM_032906	-135740	-	TSC_hg19_v1_chr4_-_89444916 AB206972 BC007876 AK312082	-135771	-	BC104883 TSC_hg19_v1_chr4_-_89618996 AL834329 AK054689 BC022544 NM_153757	38283	-	AB385402 AB020721 TSC_hg19_v1_chr4_-_89744384 AK027138 BC033006 BC086875 BC058029 AK296932 NM_001015045 AK091787 AX747185	163589	-	CU687656 BC063126 BC041029 BC053569 BX647410 NM_014883	397527	-	AK296379|HERC3|8916|hect domain and RLD 3##AK289990|HERC3|8916|hect domain and RLD 3##BC038960|HERC3|8916|hect domain and RLD 3##D25215|HERC3|8916|hect domain and RLD 3##NM_014606|HERC3|8916|hect domain and RLD 3##NM_001042616|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_032906|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AB206972|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##BC007876|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AK312082|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##BC104883|NAP1L5|266812|nucleosome assembly protein 1-like 5##AL834329|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK054689|NAP1L5|266812|nucleosome assembly protein 1-like 5##BC022544|NAP1L5|266812|nucleosome assembly protein 1-like 5##NM_153757|NAP1L5|266812|nucleosome assembly protein 1-like 5##AB020721|FAM13A|10144|family with sequence similarity 13, member A##AK027138|FAM13A|10144|family with sequence similarity 13, member A##BC033006|FAM13A|10144|family with sequence similarity 13, member A##BC086875|FAM13A|10144|family with sequence similarity 13, member A##BC058029|FAM13A|10144|family with sequence similarity 13, member A##AK296932|FAM13A|10144|family with sequence similarity 13, member A##NM_001015045|FAM13A|10144|family with sequence similarity 13, member A##AK091787|FAM13A|10144|family with sequence similarity 13, member A##BC063126|FAM13A|10144|family with sequence similarity 13, member A##BC041029|FAM13A|10144|family with sequence similarity 13, member A##BC053569|FAM13A|10144|family with sequence similarity 13, member A##BX647410|FAM13A|10144|family with sequence similarity 13, member A##NM_014883|FAM13A|10144|family with sequence similarity 13, member A	0.090952	
chr8	107717435	107717559	reg1009777.p1	10.143	+	TSC_hg19_v1_chr8_+_107670114 AK292899 BC032710 BC019691	-47382	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	-47509	+	AK296561 NM_001198532	-257346	+	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	20858	+	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	64947	-	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	792691	-	AK292899|OXR1|55074|oxidation resistance 1##BC032710|OXR1|55074|oxidation resistance 1##BC019691|OXR1|55074|oxidation resistance 1##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1	0.801565	CTCF.p2:-14:0.802
chr17	13241251	13241358	reg1010287.p2	10.141	+	TSC_hg19_v1_chr17_-_12921332 AK001392 NM_001165962 NM_018127 NM_173717	-319948	-	TSC_hg19_v1_chr17_-_12921325 AK298397 AK094687 BC001939 BC004158	-319985	-	TSC_hg19_v1_chr17_-_12921295 AK300011 AF304370 CR457261 CU674942	-320028	-	AY358838 TSC_hg19_v1_chr17_-_13505228 AF105376 NM_006042 AK292047	263933	-	TSC_hg19_v1_chr17_-_13972756 AK123100	731458	-	NM_001303 TSC_hg19_v1_chr17_+_13972839 AK312718	731475	+	AK001392|ELAC2|60528|elaC homolog 2 (E. coli)##NM_001165962|ELAC2|60528|elaC homolog 2 (E. coli)##NM_018127|ELAC2|60528|elaC homolog 2 (E. coli)##NM_173717|ELAC2|60528|elaC homolog 2 (E. coli)##AK298397|ELAC2|60528|elaC homolog 2 (E. coli)##AK094687|ELAC2|60528|elaC homolog 2 (E. coli)##BC001939|ELAC2|60528|elaC homolog 2 (E. coli)##BC004158|ELAC2|60528|elaC homolog 2 (E. coli)##AK300011|ELAC2|60528|elaC homolog 2 (E. coli)##AF304370|ELAC2|60528|elaC homolog 2 (E. coli)##CR457261|ELAC2|60528|elaC homolog 2 (E. coli)##AY358838|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AF105376|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_006042|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AK292047|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_001303|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK312718|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	0.953301	CTCF.p2:-5:0.953
chr19	3472117	3472253	reg1013812.p1	10.141	+	CU680225 TSC_hg19_v1_chr19_-_3462913	-9346	-	TSC_hg19_v1_chr19_+_3366607 X92857 AB590220 CU680224 DQ893655 DQ895795	-105570	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	-105605	+	TSC_hg19_v1_chr19_-_3480524 BC146979 BC146984 NM_001136503	8341	-	BC002817 NM_031304 TSC_hg19_v1_chr19_-_3500673	28464	-	NM_001145165	28752	-	X92857|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ893655|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ895795|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC146979|C19orf77|284422|chromosome 19 open reading frame 77##BC146984|C19orf77|284422|chromosome 19 open reading frame 77##NM_001136503|C19orf77|284422|chromosome 19 open reading frame 77##BC002817|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase##NM_031304|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase##NM_001145165|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase	0.998554	CTCF.p2:-8:0.999
chr14	95908989	95909100	reg1011319.p1	10.140	+	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	-122861	-	TSC_hg19_v1_chr14_+_95624023 BC040596	-285023	+	TSC_hg19_v1_chr14_-_95623867 BC046934 AB023145 BC150287 NM_177438	-285252	-	AK131436 BC146604 BX248076 NM_152592	33060	-	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	91971	-	TSC_hg19_v1_chr14_+_96001352 NM_016417	92282	+	AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC046934|DICER1|23405|dicer 1, ribonuclease type III##AB023145|DICER1|23405|dicer 1, ribonuclease type III##BC150287|DICER1|23405|dicer 1, ribonuclease type III##NM_177438|DICER1|23405|dicer 1, ribonuclease type III##AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##NM_016417|GLRX5|51218|glutaredoxin 5	0.999895	CTCF.p2:-8:1.000
chr1	178159081	178159201	reg1010843.p1	10.139	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-95500	+	TSC_hg19_v1_chr1_+_178063306 BC063442	-95837	+	TSC_hg19_v1_chr1_+_178063275 BC030292	-95866	+	AF047711 NM_004841 AK290308	151493	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	323125	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	535232	+	BC110611|RASAL2|9462|RAS protein activator like 2##BC063442|RASAL2|9462|RAS protein activator like 2##BC030292|RASAL2|9462|RAS protein activator like 2##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	0.849298	CTCF.p2:12:0.849
chr1	221437235	221437345	reg1010284.p1	10.139	+	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	-384191	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	-384376	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	-384529	+	NM_144728	473511	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	478118	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	478140	-	DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##NM_144728|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10	0.999703	CTCF.p2:1:1.000
chr16	50247972	50248105	reg1009651.p2	10.139	+	TSC_hg19_v1_chr16_+_50186838 AK300918 NM_001040284 NM_001040285	-61203	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	-148078	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	-148145	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	52438	+	TSC_hg19_v1_chr16_+_50308041 BC039891	60015	+	NM_001114 D25538	73785	+	AK300918|PAPD5|64282|PAP associated domain containing 5##NM_001040284|PAPD5|64282|PAP associated domain containing 5##NM_001040285|PAPD5|64282|PAP associated domain containing 5##AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK093706|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7	0.978968	CTCF.p2:-5:0.979
chr16	58340343	58340451	reg1011044.p2	10.138	+	AK302175 AK058068 BC057843 NM_001080492	-11483	-	TSC_hg19_v1_chr16_+_58283871 AK299066 NM_001142302 NM_014157 AK314300 AL136785 BC126445 BC126447 AF161550 AB462987 AM392831 CR533506 HQ258203	-56529	+	DQ893025 DQ896269 AB463465 BC008812 NM_001896	-108686	-	NM_001126129 NM_001126130 NM_022770 TSC_hg19_v1_chr16_+_58426340 AK315622 AK023974 BC014437 BC005879 CR457283	86004	+	NM_020465 TSC_hg19_v1_chr16_+_58497607	157183	+	TSC_hg19_v1_chr16_+_58497628 AB021172	157241	+	AK302175|PRSS54|221191|protease, serine, 54##AK058068|PRSS54|221191|protease, serine, 54##BC057843|PRSS54|221191|protease, serine, 54##NM_001080492|PRSS54|221191|protease, serine, 54##AK299066|CCDC113|29070|coiled-coil domain containing 113##NM_001142302|CCDC113|29070|coiled-coil domain containing 113##NM_014157|CCDC113|29070|coiled-coil domain containing 113##AK314300|CCDC113|29070|coiled-coil domain containing 113##AL136785|CCDC113|29070|coiled-coil domain containing 113##BC126445|CCDC113|29070|coiled-coil domain containing 113##BC126447|CCDC113|29070|coiled-coil domain containing 113##AF161550|CCDC113|29070|coiled-coil domain containing 113##AM392831|CCDC113|29070|coiled-coil domain containing 113##CR533506|CCDC113|29070|coiled-coil domain containing 113##HQ258203|CCDC113|29070|coiled-coil domain containing 113##DQ893025|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##DQ896269|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##BC008812|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##NM_001896|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##NM_001126129|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##NM_001126130|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##NM_022770|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##AK315622|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##AK023974|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##BC014437|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##BC005879|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##CR457283|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##NM_020465|NDRG4|65009|NDRG family member 4##AB021172|NDRG4|65009|NDRG family member 4	0.975747	CTCF.p2:21:0.976
chr20	33061210	33061330	reg1010724.p1	10.138	+	TSC_hg19_v1_chr20_+_32951078 NM_031483 AK297809 AK304090 AK315212 BC011571 AB056663	-110178	+	AK097610 NM_001161766	-161663	-	BT006697 CU679982 DQ890569 DQ891701 DQ893730 DQ895397 TSC_hg19_v1_chr20_-_32891162 M61832 M61831 BC010018 BC011606 AK300014 AK316180 AK290422 AK309204 NM_000687	-170126	-	TSC_hg19_v1_chr20_+_33104226 NM_014183 AF132750 BC002481 AF161511 AK294214 AF165516	42946	+	NM_181509	73421	+	TSC_hg19_v1_chr20_+_33146525 NM_032514 AF276658 BC015810 AL833855 AB528175 BT007452 DQ893641 DQ895536 AM392590	85316	+	NM_031483|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK297809|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK304090|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK315212|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##BC011571|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AB056663|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK097610|AHCY|191|adenosylhomocysteinase##NM_001161766|AHCY|191|adenosylhomocysteinase##BT006697|AHCY|191|adenosylhomocysteinase##DQ890569|AHCY|191|adenosylhomocysteinase##DQ891701|AHCY|191|adenosylhomocysteinase##DQ893730|AHCY|191|adenosylhomocysteinase##DQ895397|AHCY|191|adenosylhomocysteinase##M61832|AHCY|191|adenosylhomocysteinase##M61831|AHCY|191|adenosylhomocysteinase##BC010018|AHCY|191|adenosylhomocysteinase##BC011606|AHCY|191|adenosylhomocysteinase##AK300014|AHCY|191|adenosylhomocysteinase##AK316180|AHCY|191|adenosylhomocysteinase##AK290422|AHCY|191|adenosylhomocysteinase##AK309204|AHCY|191|adenosylhomocysteinase##NM_000687|AHCY|191|adenosylhomocysteinase##NM_014183|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF132750|DYNLRB1|83658|dynein, light chain, roadblock-type 1##BC002481|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF161511|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AK294214|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF165516|DYNLRB1|83658|dynein, light chain, roadblock-type 1##NM_181509|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##NM_032514|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AF276658|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##BC015810|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AL833855|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##BT007452|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##DQ893641|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##DQ895536|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AM392590|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha	0.0	
chr8	18066536	18066660	reg1013190.p1	10.138	+	NM_001160179	-38628	+	TSC_hg19_v1_chr8_-_17942455 AK025732 BC016828 NM_001127505 NM_004315	-124140	-	TSC_hg19_v1_chr8_-_17942339 CU677731 AY305384	-124270	-	AJ581152 NM_000662 NM_001160170 NM_001160171 NM_001160172 NM_001160173 NM_001160175 NM_001160176 BC047666 BX647521 BC013732 AJ581135 TSC_hg19_v1_chr8_+_18067655	1036	+	AJ581141 NM_001160174	12578	+	D90042 NM_000015 BC067218 BC015878 D90040 AJ581144	182190	+	NM_001160179|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##AK025732|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1##BC016828|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1##NM_001127505|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1##NM_004315|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1##AY305384|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1##AJ581152|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_000662|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160170|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160171|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160172|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160173|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160175|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160176|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BC047666|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BX647521|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BC013732|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##AJ581135|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##AJ581141|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160174|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##D90042|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##NM_000015|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC067218|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC015878|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##D90040|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##AJ581144|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)	0.316099	CTCF.p2:-13:0.316
chr8	108920686	108920816	reg1011315.p1	10.137	+	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	-410563	-	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	-1138307	-	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	-1182396	+	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	175123	-	AB527268 CR457029 CR542275 CU674376 CU677689 CU678957 DQ892278 DQ895478 BC000734 TSC_hg19_v1_chr8_-_109260938 U54562 U85947	340183	-	TSC_hg19_v1_chr8_-_109260947 BC017887 AK313186 BC005944 BC016706 BC021679 U94175 U62962 BC008419 NM_001568 AK310902	340234	-	U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1##AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2##CR457029|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR542275|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ892278|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ895478|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC000734|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U54562|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U85947|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC017887|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK313186|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC005944|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC016706|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC021679|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U94175|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U62962|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC008419|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##NM_001568|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK310902|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E	0.996069	CTCF.p2:0:0.996
chr16	31880037	31880182	reg1013546.p1	10.136	+	TSC_hg19_v1_chr16_+_31724584 AK299345 AK128671 BC018134 AX721120	-155508	+	TSC_hg19_v1_chr16_+_31724564 AL832197	-155544	+	TSC_hg19_v1_chr16_+_31724557 NM_001130913 BC055408	-155563	+	TSC_hg19_v1_chr16_+_31885098 NM_003414	4978	+	TSC_hg19_v1_chr16_+_31885114 AK096390	5007	+	AF220492 TSC_hg19_v1_chr16_+_31885131	5023	+	AK128671|ZNF720|124411|zinc finger protein 720##BC018134|ZNF720|124411|zinc finger protein 720##AL832197|ZNF720|124411|zinc finger protein 720##NM_001130913|ZNF720|124411|zinc finger protein 720##BC055408|ZNF720|124411|zinc finger protein 720##NM_003414|ZNF267|10308|zinc finger protein 267##AK096390|ZNF267|10308|zinc finger protein 267##AF220492|ZNF267|10308|zinc finger protein 267	0.999955	CTCF.p2:-1:1.000
chr10	78871766	78871872	reg1010094.p2	10.135	+	AF267860 NM_032024	-1329301	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1710254	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1710338	-	AF118141 TSC_hg19_v1_chr10_-_79397246	525406	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	525517	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	525587	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.995163	CTCF.p2:9:0.995
chr1	224888810	224888918	reg1010076.p1	10.134	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-84685	+	AB209887 NM_001115113 NM_025160	-266864	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-267104	-	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	228501	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	726865	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	726937	-	AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor	0.900497	CTCF.p2:-10:0.900
chr20	23779985	23780110	reg1013523.p1	10.134	+	J03870 BC021225 NM_001898	-48482	-	CU688086 BC074952 BC074953 NM_001899 X54667 BC065714	-110406	-	BX647523 BT006839 CR541988 CR542018 AB590227 DQ891439 EU176584 AB587083 TSC_hg19_v1_chr20_-_23618593 BC013083 NM_000099 X05607 BC110305 AK312213	-161548	-	CU687582 NM_001322 BC062679	27285	-	AB590893 CU686872 HQ447459 BC069514 X70377 BC062678 NM_001900	80299	-	L20492 L20491 NM_178312	187424	-	J03870|CST1|1469|cystatin SN##BC021225|CST1|1469|cystatin SN##NM_001898|CST1|1469|cystatin SN##BC074952|CST4|1472|cystatin S##BC074953|CST4|1472|cystatin S##NM_001899|CST4|1472|cystatin S##X54667|CST4|1472|cystatin S##BC065714|CST4|1472|cystatin S##BX647523|CST3|1471|cystatin C##BT006839|CST3|1471|cystatin C##CR541988|CST3|1471|cystatin C##CR542018|CST3|1471|cystatin C##DQ891439|CST3|1471|cystatin C##EU176584|CST3|1471|cystatin C##AB587083|CST3|1471|cystatin C##BC013083|CST3|1471|cystatin C##NM_000099|CST3|1471|cystatin C##X05607|CST3|1471|cystatin C##BC110305|CST3|1471|cystatin C##AK312213|CST3|1471|cystatin C##NM_001322|CST2|1470|cystatin SA##BC062679|CST2|1470|cystatin SA##HQ447459|CST5|1473|cystatin D##BC069514|CST5|1473|cystatin D##X70377|CST5|1473|cystatin D##BC062678|CST5|1473|cystatin D##NM_001900|CST5|1473|cystatin D##L20492|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20491|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178312|GGTLC1|92086|gamma-glutamyltransferase light chain 1	0.998771	CTCF.p2:-12:0.999
chr22	26760540	26760654	reg1010942.p1	10.134	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	-194934	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	-195100	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	-195160	+	TSC_hg19_v1_chr22_+_26825246 NM_020437 BC036753 AK315112	64727	+	AK097886 BC035614 AK054717 AL365512 NM_152841	114866	-	TSC_hg19_v1_chr22_-_26879750 AK057648 AK290211	119145	-	CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4##BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4##AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4##AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4##NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4##AK057648|HPS4|89781|Hermansky-Pudlak syndrome 4##AK290211|HPS4|89781|Hermansky-Pudlak syndrome 4	0.994971	CTCF.p2:-9:0.995
chr12	11706998	11707151	reg1013176.p1	10.133	+	BC044827 NM_006248	-158583	-	BC044827 K03205 K03206 BC141917 K03204 NM_005039 NM_199353 NM_199354 AX772842	-198558	-	BC130386 BC035362 K03207 NM_002723 BC128191	-243714	-	TSC_hg19_v1_chr12_+_11802659 AK289441	95599	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	95700	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	95912	+	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2##BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##K03205|PRB1|5542|proline-rich protein BstNI subfamily 1##K03206|PRB1|5542|proline-rich protein BstNI subfamily 1##BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1##K03204|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1##BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4##BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4##K03207|PRB4|5545|proline-rich protein BstNI subfamily 4##NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4##BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4##AK289441|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6	0.960664	CTCF.p2:-7:0.961
chr1	51169855	51169976	reg1010484.p1	10.133	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	-280804	-	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-594377	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-595231	+	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	255662	-	TSC_hg19_v1_chr1_-_51425740 BC067100	255841	-	TSC_hg19_v1_chr1_-_51425796 AJ271408	255884	-	NM_032110|DMRTA2|63950|DMRT-like family A2##AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1##AJ271408|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.989616	CTCF.p2:-9:0.990
chr16	67313318	67313414	reg1010738.p2	10.133	+	AK308298 TSC_hg19_v1_chr16_+_67313229	-181	+	TSC_hg19_v1_chr16_+_67312980 NM_001129728	-352	+	TSC_hg19_v1_chr16_+_67312688 BC001520	-652	+	TSC_hg19_v1_chr16_+_67313455 BC063501 NM_001129729 NM_001129731 BC054486	76	+	BC070103 BC094790 AK302748 AK302567 BC117335 NM_001100915 AK097481	47278	-	TSC_hg19_v1_chr16_+_67360728 AY963267 BC026156 NM_018296 BC018031	47386	+	AK308298|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129728|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC001520|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC063501|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129729|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129731|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC054486|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC070103|KCTD19|146212|potassium channel tetramerisation domain containing 19##BC094790|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK302748|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK302567|KCTD19|146212|potassium channel tetramerisation domain containing 19##BC117335|KCTD19|146212|potassium channel tetramerisation domain containing 19##NM_001100915|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK097481|KCTD19|146212|potassium channel tetramerisation domain containing 19##AY963267|LRRC36|55282|leucine rich repeat containing 36##BC026156|LRRC36|55282|leucine rich repeat containing 36##NM_018296|LRRC36|55282|leucine rich repeat containing 36##BC018031|LRRC36|55282|leucine rich repeat containing 36	0.998256	CTCF.p2:-3:0.998
chr18	70339745	70339862	reg1010289.p2	10.133	+	NM_182511 TSC_hg19_v1_chr18_-_70211738	-128073	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	-129028	-	TSC_hg19_v1_chr18_+_67956280 BC020082	-2383542	+	AF448839 NM_138999	193130	-	AF448838 BC050329 NM_001201465 NM_138966	195006	-	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	1475224	-	NM_182511|CBLN2|147381|cerebellin 2 precursor##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##BC020082|SOCS6|9306|suppressor of cytokine signaling 6##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15	0.940882	CTCF.p2:7:0.941
chr1	161195438	161195566	reg1010530.p1	10.132	+	TSC_hg19_v1_chr1_-_161193419 AK312034 BC005282 NM_001643	-2104	-	BT006786 AB590164 DQ892493 DQ895705 AB106565 M29882 X00955 TSC_hg19_v1_chr1_-_161193333	-2239	-	TSC_hg19_v1_chr1_+_161185087 M33195 NM_004106 BC033872 AB590329 DQ890782 EU176502	-10405	+	NM_032174 TSC_hg19_v1_chr1_+_161195849 AK022832 AK027704 AK297848 BX537951 AK297831	355	+	AK310773 AY572806 AY572807 AY572808 AY572809 AY572810 AY572811 AY572812 AY572813 AY572814 AY572815 AY572816 AY572817 AY572818 AY572819 AY572820 AY572821 AY572822 AY572823 AY572824 AY572825 AY572826 AY572827 BC121120 BC121121 BC030972 BC069626 BC069651 AK316208 AK303757 NM_001077469 NM_001077470 NM_001077471 NM_001077472 NM_001077473 NM_001077474 NM_001077475 NM_001077476 NM_001077477 NM_001077478 NM_001077479 NM_001077480 NM_001077481 NM_001077482 NM_005122 AK303796	12454	-	BC028905 NM_001102566 TSC_hg19_v1_chr1_+_161228534 BC067884 BC147003 BC147004	33063	+	AK312034|APOA2|336|apolipoprotein A-II##BC005282|APOA2|336|apolipoprotein A-II##NM_001643|APOA2|336|apolipoprotein A-II##BT006786|APOA2|336|apolipoprotein A-II##DQ892493|APOA2|336|apolipoprotein A-II##DQ895705|APOA2|336|apolipoprotein A-II##AB106565|APOA2|336|apolipoprotein A-II##M29882|APOA2|336|apolipoprotein A-II##X00955|APOA2|336|apolipoprotein A-II##M33195|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##NM_004106|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##BC033872|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##DQ890782|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##EU176502|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##NM_032174|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK022832|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK027704|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK297848|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##BX537951|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK297831|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK310773|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572806|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572807|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572808|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572809|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572810|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572811|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572812|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572813|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572814|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572815|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572816|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572817|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572818|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572819|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572820|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572821|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572822|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572823|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572824|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572825|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572826|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572827|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC121120|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC121121|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC030972|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC069626|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC069651|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK316208|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK303757|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077469|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077470|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077471|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077472|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077473|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077474|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077475|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077476|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077477|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077478|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077479|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077480|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077481|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077482|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_005122|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK303796|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC028905|PCP4L1|654790|Purkinje cell protein 4 like 1##NM_001102566|PCP4L1|654790|Purkinje cell protein 4 like 1##BC067884|PCP4L1|654790|Purkinje cell protein 4 like 1##BC147003|PCP4L1|654790|Purkinje cell protein 4 like 1##BC147004|PCP4L1|654790|Purkinje cell protein 4 like 1	0.020774	
chr1	43880419	43880533	reg1010805.p2	10.132	+	TSC_hg19_v1_chr1_+_43855607 BC051343 AK091821 AX747203 AB527118	-24857	+	TSC_hg19_v1_chr1_+_43855583 BC017576 NM_015284	-24910	+	TSC_hg19_v1_chr1_-_43855484 NM_052877 NM_201542	-24998	-	BC006140 BC019041 TSC_hg19_v1_chr1_-_43919494	38956	-	TSC_hg19_v1_chr1_-_43919547 AK096244 AY037165 AY775560 NM_001190880 NM_001243526 NM_031207	39127	-	TSC_hg19_v1_chr1_+_43996556 AB621807 AB177856 NM_002840 NM_130440 Y00815 BC048768 AB177857 BC048416	116128	+	BC051343|SZT2|23334|seizure threshold 2 homolog (mouse)##AK091821|SZT2|23334|seizure threshold 2 homolog (mouse)##BC017576|SZT2|23334|seizure threshold 2 homolog (mouse)##NM_015284|SZT2|23334|seizure threshold 2 homolog (mouse)##NM_052877|MED8|112950|mediator complex subunit 8##NM_201542|MED8|112950|mediator complex subunit 8##BC006140|HYI|81888|hydroxypyruvate isomerase (putative)##BC019041|HYI|81888|hydroxypyruvate isomerase (putative)##AK096244|HYI|81888|hydroxypyruvate isomerase (putative)##AY037165|HYI|81888|hydroxypyruvate isomerase (putative)##AY775560|HYI|81888|hydroxypyruvate isomerase (putative)##NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)##NM_001243526|HYI|81888|hydroxypyruvate isomerase (putative)##NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)##AB177856|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##NM_002840|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##NM_130440|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##Y00815|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##BC048768|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##AB177857|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##BC048416|PTPRF|5792|protein tyrosine phosphatase, receptor type, F	0.801753	CTCF.p2:6:0.802
chr10	43362252	43362359	reg1010413.p1	10.131	+	TSC_hg19_v1_chr10_+_43278248 AK308420 BC043345	-84055	+	NM_014753	-84352	+	TSC_hg19_v1_chr10_-_43187188 AK123067	-175115	-	TSC_hg19_v1_chr10_+_43572516 NM_020630 NM_020975 BC003072 BC004257 X15262 AK291807 AB384817 CU678360 CU678648 Y12528	210298	+	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	271637	+	BC022548 NM_145313	400061	-	AK308420|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC043345|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##NM_014753|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##NM_020630|RET|5979|ret proto-oncogene##NM_020975|RET|5979|ret proto-oncogene##BC003072|RET|5979|ret proto-oncogene##BC004257|RET|5979|ret proto-oncogene##X15262|RET|5979|ret proto-oncogene##AK291807|RET|5979|ret proto-oncogene##Y12528|RET|5979|ret proto-oncogene##AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC022548|RASGEF1A|221002|RasGEF domain family, member 1A##NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A	0.995573	CTCF.p2:-13:0.996
chr19	44098926	44099059	reg1012993.p1	10.130	+	TSC_hg19_v1_chr19_+_44084761 AK129550	-14213	+	BC071811 NM_001193622 TSC_hg19_v1_chr19_+_44084711	-14270	+	AK296854 NM_001193621	-18041	+	TSC_hg19_v1_chr19_-_44100287 NM_001007561	1220	-	AK026353 NM_024327	1551	+	TSC_hg19_v1_chr19_+_44100765 NM_001145347 AK297891 BC002981	1768	+	AK129550|LOC390940|390940|uncharacterized protein ENSP00000244321##BC071811|LOC390940|390940|uncharacterized protein ENSP00000244321##NM_001193622|LOC390940|390940|uncharacterized protein ENSP00000244321##AK296854|LOC390940|390940|uncharacterized protein ENSP00000244321##NM_001193621|LOC390940|390940|uncharacterized protein ENSP00000244321##NM_001007561|IRGQ|126298|immunity-related GTPase family, Q##AK026353|ZNF576|79177|zinc finger protein 576##NM_024327|ZNF576|79177|zinc finger protein 576##NM_001145347|ZNF576|79177|zinc finger protein 576##BC002981|ZNF576|79177|zinc finger protein 576	0.010139	
chr4	186959421	186959561	reg1012674.p1	10.130	+	NM_021069	-81622	-	AK295742 AK056628 BC035329 AB018320 TSC_hg19_v1_chr4_-_186877527	-82019	-	AK225327 AF049884 TSC_hg19_v1_chr4_-_186733388 NM_003603 NM_001145670	-226101	-	BC017954 NM_003265 AK314208 BC068487 BC094737 TSC_hg19_v1_chr4_+_186990309 BC059372 BC096333 BC096334 BC096335 DQ445682 U88879	30838	+	NM_015398 TSC_hg19_v1_chr4_+_187065998 BC142992 BC110816	106554	+	NM_001006655 AF173894	110867	+	NM_021069|SORBS2|8470|sorbin and SH3 domain containing 2##AK295742|SORBS2|8470|sorbin and SH3 domain containing 2##AK056628|SORBS2|8470|sorbin and SH3 domain containing 2##BC035329|SORBS2|8470|sorbin and SH3 domain containing 2##AB018320|SORBS2|8470|sorbin and SH3 domain containing 2##AK225327|SORBS2|8470|sorbin and SH3 domain containing 2##AF049884|SORBS2|8470|sorbin and SH3 domain containing 2##NM_003603|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145670|SORBS2|8470|sorbin and SH3 domain containing 2##BC017954|TLR3|7098|toll-like receptor 3##NM_003265|TLR3|7098|toll-like receptor 3##AK314208|TLR3|7098|toll-like receptor 3##BC068487|TLR3|7098|toll-like receptor 3##BC094737|TLR3|7098|toll-like receptor 3##BC059372|TLR3|7098|toll-like receptor 3##BC096333|TLR3|7098|toll-like receptor 3##BC096334|TLR3|7098|toll-like receptor 3##BC096335|TLR3|7098|toll-like receptor 3##DQ445682|TLR3|7098|toll-like receptor 3##U88879|TLR3|7098|toll-like receptor 3##NM_015398|FAM149A|25854|family with sequence similarity 149, member A##BC142992|FAM149A|25854|family with sequence similarity 149, member A##BC110816|FAM149A|25854|family with sequence similarity 149, member A##NM_001006655|FAM149A|25854|family with sequence similarity 149, member A##AF173894|FAM149A|25854|family with sequence similarity 149, member A	0.781784	CTCF.p2:9:0.782
chr3	56890006	56890143	reg1013774.p1	10.129	+	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	-54163	-	AK293864 AB209661 NM_001128616	-80405	-	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-172867	-	AY221117 NM_181727 BC126274 BC136498	204429	+	AF433662 AK302493 NM_001128615	223239	-	AF458067 TSC_hg19_v1_chr3_-_57199347	309259	-	AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12##AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF458067|IL17RD|54756|interleukin 17 receptor D	0.829709	CTCF.p2:5:0.830
chr6	138121239	138121371	reg1011702.p1	10.129	+	BC051352 AK096362 NM_175747	-305780	-	TSC_hg19_v1_chr6_-_137540556 NM_000416	-580747	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-580760	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	67232	+	TSC_hg19_v1_chr6_-_138189314 AK124173	68045	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	307263	-	BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector	0.02181	
chr14	51327334	51327430	reg1012232.p2	10.128	+	AB046785 TSC_hg19_v1_chr14_-_51297860 BC065521 AF223937 AF223938 AF223939 AF302773 AY736182 NM_016350 NM_020921 NM_182944 NM_182946	-29562	-	TSC_hg19_v1_chr14_-_51135048 AK225896 AK095903	-192314	-	BC020537 TSC_hg19_v1_chr14_-_51135025 BC006385 NM_021818 AK021500	-192356	-	AY311396 AY311397 AY311398 AY311399 BC107141 NM_001206673 NM_181814 BC107142 AK128464	11496	+	AF046785 AF066858 TSC_hg19_v1_chr14_-_51411202 AK313206 Y15233 AK309333 BC065011 BC110791 BC009895 BC082229 AK225904 AK300580 BC095850 M14636 NM_001163940 NM_002863	83800	-	CU680598 TSC_hg19_v1_chr14_-_51561792 BC013414 D87458	234395	-	AB046785|NIN|51199|ninein (GSK3B interacting protein)##BC065521|NIN|51199|ninein (GSK3B interacting protein)##AF223937|NIN|51199|ninein (GSK3B interacting protein)##AF223938|NIN|51199|ninein (GSK3B interacting protein)##AF223939|NIN|51199|ninein (GSK3B interacting protein)##AF302773|NIN|51199|ninein (GSK3B interacting protein)##AY736182|NIN|51199|ninein (GSK3B interacting protein)##NM_016350|NIN|51199|ninein (GSK3B interacting protein)##NM_020921|NIN|51199|ninein (GSK3B interacting protein)##NM_182944|NIN|51199|ninein (GSK3B interacting protein)##NM_182946|NIN|51199|ninein (GSK3B interacting protein)##AK225896|SAV1|60485|salvador homolog 1 (Drosophila)##AK095903|SAV1|60485|salvador homolog 1 (Drosophila)##BC020537|SAV1|60485|salvador homolog 1 (Drosophila)##BC006385|SAV1|60485|salvador homolog 1 (Drosophila)##NM_021818|SAV1|60485|salvador homolog 1 (Drosophila)##AK021500|SAV1|60485|salvador homolog 1 (Drosophila)##AY311396|ABHD12B|145447|abhydrolase domain containing 12B##AY311397|ABHD12B|145447|abhydrolase domain containing 12B##AY311398|ABHD12B|145447|abhydrolase domain containing 12B##AY311399|ABHD12B|145447|abhydrolase domain containing 12B##BC107141|ABHD12B|145447|abhydrolase domain containing 12B##NM_001206673|ABHD12B|145447|abhydrolase domain containing 12B##NM_181814|ABHD12B|145447|abhydrolase domain containing 12B##BC107142|ABHD12B|145447|abhydrolase domain containing 12B##AK128464|ABHD12B|145447|abhydrolase domain containing 12B##AF046785|PYGL|5836|phosphorylase, glycogen, liver##AF066858|PYGL|5836|phosphorylase, glycogen, liver##AK313206|PYGL|5836|phosphorylase, glycogen, liver##Y15233|PYGL|5836|phosphorylase, glycogen, liver##AK309333|PYGL|5836|phosphorylase, glycogen, liver##BC065011|PYGL|5836|phosphorylase, glycogen, liver##BC110791|PYGL|5836|phosphorylase, glycogen, liver##BC009895|PYGL|5836|phosphorylase, glycogen, liver##BC082229|PYGL|5836|phosphorylase, glycogen, liver##AK225904|PYGL|5836|phosphorylase, glycogen, liver##AK300580|PYGL|5836|phosphorylase, glycogen, liver##BC095850|PYGL|5836|phosphorylase, glycogen, liver##M14636|PYGL|5836|phosphorylase, glycogen, liver##NM_001163940|PYGL|5836|phosphorylase, glycogen, liver##NM_002863|PYGL|5836|phosphorylase, glycogen, liver##BC013414|TRIM9|114088|tripartite motif containing 9##D87458|TRIM9|114088|tripartite motif containing 9	0.01708	
chr3	196913972	196914096	reg1011054.p1	10.128	+	AK294855 NM_001204387 NM_001204388	-3033	-	TSC_hg19_v1_chr3_-_196756689 NM_033316 NM_005929	-157332	-	BT007377 AB527337 M12154 BC093920 BC111947 BC143257 BC002623 BC001875 BC007550 BC053510 BC071910 TSC_hg19_v1_chr3_-_196756658 BC032752	-157411	-	TSC_hg19_v1_chr3_-_197024987 BC015560 BC028486 AK310893	110899	-	BC140841 BC144651 TSC_hg19_v1_chr3_-_197025506 AK304280 NM_001098424 NM_001204386 NM_004087 U13896 U13897 AK310596	111440	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	368808	-	AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_033316|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_005929|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BT007377|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##M12154|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC093920|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC111947|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC143257|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC002623|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC001875|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC007550|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC053510|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC071910|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC032752|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC015560|DLG1|1739|discs, large homolog 1 (Drosophila)##BC028486|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310893|DLG1|1739|discs, large homolog 1 (Drosophila)##BC140841|DLG1|1739|discs, large homolog 1 (Drosophila)##BC144651|DLG1|1739|discs, large homolog 1 (Drosophila)##AK304280|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001098424|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204386|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_004087|DLG1|1739|discs, large homolog 1 (Drosophila)##U13896|DLG1|1739|discs, large homolog 1 (Drosophila)##U13897|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310596|DLG1|1739|discs, large homolog 1 (Drosophila)##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1	0.993042	CTCF.p2:7:0.993
chr9	138235933	138236049	reg1010564.p2	10.128	+	AK290478 TSC_hg19_v1_chr9_+_137979513	-256477	+	TSC_hg19_v1_chr9_+_137967404 AK289921 CU679089 BT007146	-268500	+	BC008763 BC011741 TSC_hg19_v1_chr9_+_137967372 AK289719	-268618	+	TSC_hg19_v1_chr9_+_138371663 AB014549 NM_014811	135659	+	AY927868 DQ892784 DQ896031 NM_001048265 NM_144654	155737	-	TSC_hg19_v1_chr9_+_138392535 NM_016034 BC008017 BC013108 AB055388 AF151849	156522	+	AK290478|OLFM1|10439|olfactomedin 1##AK289921|OLFM1|10439|olfactomedin 1##BT007146|OLFM1|10439|olfactomedin 1##BC008763|OLFM1|10439|olfactomedin 1##BC011741|OLFM1|10439|olfactomedin 1##AK289719|OLFM1|10439|olfactomedin 1##AB014549|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##NM_014811|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##AY927868|C9orf116|138162|chromosome 9 open reading frame 116##DQ892784|C9orf116|138162|chromosome 9 open reading frame 116##DQ896031|C9orf116|138162|chromosome 9 open reading frame 116##NM_001048265|C9orf116|138162|chromosome 9 open reading frame 116##NM_144654|C9orf116|138162|chromosome 9 open reading frame 116##NM_016034|MRPS2|51116|mitochondrial ribosomal protein S2##BC008017|MRPS2|51116|mitochondrial ribosomal protein S2##BC013108|MRPS2|51116|mitochondrial ribosomal protein S2##AB055388|MRPS2|51116|mitochondrial ribosomal protein S2##AF151849|MRPS2|51116|mitochondrial ribosomal protein S2	0.989356	CTCF.p2:-5:0.989
chr1	101332048	101332191	reg1010534.p1	10.127	+	NM_001078 NM_001199834 NM_080682 TSC_hg19_v1_chr1_+_101185297 AK223266 AK291732 AK296692 BC068490 M30257 BC017276 BC085003 M60335 AB590609 EU831989 EU832082 X53051 CU686647	-146813	+	AK225748 TSC_hg19_v1_chr1_+_101004594	-327591	+	AB042410 BC036775 NM_022049	-328410	+	TSC_hg19_v1_chr1_-_101360249 BC014910	28148	-	TSC_hg19_v1_chr1_-_101360368 AK312895 AB009284 AF000416 AK096914 BC036015 AK298124 BC001649 BC001835 BC008722	28251	-	TSC_hg19_v1_chr1_-_101360405 NM_001033025 NM_001439	28292	-	NM_001078|VCAM1|7412|vascular cell adhesion molecule 1##NM_001199834|VCAM1|7412|vascular cell adhesion molecule 1##NM_080682|VCAM1|7412|vascular cell adhesion molecule 1##AK223266|VCAM1|7412|vascular cell adhesion molecule 1##AK291732|VCAM1|7412|vascular cell adhesion molecule 1##AK296692|VCAM1|7412|vascular cell adhesion molecule 1##BC068490|VCAM1|7412|vascular cell adhesion molecule 1##M30257|VCAM1|7412|vascular cell adhesion molecule 1##BC017276|VCAM1|7412|vascular cell adhesion molecule 1##BC085003|VCAM1|7412|vascular cell adhesion molecule 1##M60335|VCAM1|7412|vascular cell adhesion molecule 1##EU831989|VCAM1|7412|vascular cell adhesion molecule 1##EU832082|VCAM1|7412|vascular cell adhesion molecule 1##X53051|VCAM1|7412|vascular cell adhesion molecule 1##AK225748|GPR88|54112|G protein-coupled receptor 88##AB042410|GPR88|54112|G protein-coupled receptor 88##BC036775|GPR88|54112|G protein-coupled receptor 88##NM_022049|GPR88|54112|G protein-coupled receptor 88##BC014910|EXTL2|2135|exostoses (multiple)-like 2##AK312895|EXTL2|2135|exostoses (multiple)-like 2##AB009284|EXTL2|2135|exostoses (multiple)-like 2##AF000416|EXTL2|2135|exostoses (multiple)-like 2##AK096914|EXTL2|2135|exostoses (multiple)-like 2##BC036015|EXTL2|2135|exostoses (multiple)-like 2##AK298124|EXTL2|2135|exostoses (multiple)-like 2##NM_001033025|EXTL2|2135|exostoses (multiple)-like 2##NM_001439|EXTL2|2135|exostoses (multiple)-like 2	0.899066	CTCF.p2:21:0.899
chr13	100094673	100094780	reg1010569.p1	10.126	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-135028	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-184112	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-241607	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	58974	+	TSC_hg19_v1_chr13_+_100153777 BC130293	59056	+	BC041830 TSC_hg19_v1_chr13_+_100229390	134651	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.998253	CTCF.p2:-1:0.998
chr1	63907435	63907543	reg1011805.p1	10.126	+	AK022700 TSC_hg19_v1_chr1_+_63833329 BC001253 AF102851	-74159	+	NM_013339 AF063604 TSC_hg19_v1_chr1_+_63833313	-74202	+	TSC_hg19_v1_chr1_+_63789065 L12142	-118405	+	AK309622 AF175306 BC009929 TSC_hg19_v1_chr1_-_63988878 BC014385 AK312944 NM_001206739 NM_014288	81392	-	AK292220 NM_032437 AK092219 TSC_hg19_v1_chr1_+_63989242 AK315850 AB058702 BC015814	81650	+	TSC_hg19_v1_chr1_+_64059081 AK294186 BC019920 NM_002633 BC001756 BC067763 AK312254 M83088 BC090856 DQ890618 DQ893786 CU676478 BT006961	151536	+	AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##NM_013339|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF063604|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##L12142|FOXD3|27022|forkhead box D3##AK309622|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AF175306|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##BC009929|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##BC014385|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AK312944|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##NM_001206739|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##NM_014288|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AK292220|EFCAB7|84455|EF-hand calcium binding domain 7##NM_032437|EFCAB7|84455|EF-hand calcium binding domain 7##AK092219|EFCAB7|84455|EF-hand calcium binding domain 7##AK315850|EFCAB7|84455|EF-hand calcium binding domain 7##AB058702|EFCAB7|84455|EF-hand calcium binding domain 7##BC015814|EFCAB7|84455|EF-hand calcium binding domain 7##AK294186|PGM1|5236|phosphoglucomutase 1##BC019920|PGM1|5236|phosphoglucomutase 1##NM_002633|PGM1|5236|phosphoglucomutase 1##BC001756|PGM1|5236|phosphoglucomutase 1##BC067763|PGM1|5236|phosphoglucomutase 1##AK312254|PGM1|5236|phosphoglucomutase 1##M83088|PGM1|5236|phosphoglucomutase 1##BC090856|PGM1|5236|phosphoglucomutase 1##DQ890618|PGM1|5236|phosphoglucomutase 1##DQ893786|PGM1|5236|phosphoglucomutase 1##BT006961|PGM1|5236|phosphoglucomutase 1	0.0	
chr9	22038188	22038335	reg1014042.p1	10.125	+	AF004819 U17075 L36844 BC014469 TSC_hg19_v1_chr9_-_22009305 NM_004936 NM_078487	-28971	-	TSC_hg19_v1_chr9_-_21994420 AB464504 S78535 NM_058195 U38945	-43810	-	BC015960 BC021998 TSC_hg19_v1_chr9_-_21994399	-43872	-	TSC_hg19_v1_chr9_+_22113543 BC038540	75348	+	TSC_hg19_v1_chr9_+_22446846 AK096011 NM_022160 BC130435 BC130437	408576	+	AB464510 TSC_hg19_v1_chr9_+_22447162	408852	+	AF004819|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##U17075|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##L36844|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##BC014469|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##NM_004936|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##NM_078487|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##S78535|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_058195|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##U38945|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##BC015960|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##BC021998|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##BC038540|CDKN2B-AS|100048912|CDKN2B antisense RNA (non-protein coding)##AK096011|DMRTA1|63951|DMRT-like family A1##NM_022160|DMRTA1|63951|DMRT-like family A1##BC130435|DMRTA1|63951|DMRT-like family A1##BC130437|DMRTA1|63951|DMRT-like family A1	0.671689	CTCF.p2:17:0.672
chr2	199179415	199179555	reg1012810.p1	10.124	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	-510115	+	NM_197970 AK302817	-528499	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-529445	-	TSC_hg19_v1_chr2_-_200213802 AK025127	1034365	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	1141317	-	TSC_hg19_v1_chr2_-_200322238 AJ438951	1142765	-	AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2##AJ438951|SATB2|23314|SATB homeobox 2	0.993528	CTCF.p2:-5:0.994
chr11	123349182	123349334	reg1012457.p1	10.123	+	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	-283253	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	-283356	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	-416379	-	TSC_hg19_v1_chr11_+_123396366 AK127457	47097	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	47246	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	81715	+	AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AK127457|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B	1.009613	CTCF.p2:40:0.998
chr12	20068752	20068881	reg1010408.p2	10.123	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-475628	+	TSC_hg19_v1_chr12_+_19592783 AB209384	-476021	+	TSC_hg19_v1_chr12_+_19592425 AK131361 NM_001114176 NM_153207 AK126973 BC022220	-476297	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	453382	+	AK308317 NM_001244683	655981	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	779679	+	BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##AK131361|AEBP2|121536|AE binding protein 2##NM_001114176|AEBP2|121536|AE binding protein 2##NM_153207|AEBP2|121536|AE binding protein 2##AK126973|AEBP2|121536|AE binding protein 2##BC022220|AEBP2|121536|AE binding protein 2##BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	0.297161	CTCF.p2:-6:0.297
chr2	171092585	171092720	reg1013147.p1	10.122	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	-57967	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-408694	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-411267	-	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	479206	+	TSC_hg19_v1_chr2_+_171571942 AB464708	479325	+	TSC_hg19_v1_chr2_+_171572707 BC069026	480058	+	AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##BC069026|SP5|389058|Sp5 transcription factor	0.875842	CTCF.p2:5:0.876
chr3	129824977	129825106	reg1013841.p1	10.122	+	NM_001136152 BC127755	-24303	+	NM_007117 TSC_hg19_v1_chr3_+_129693145	-131912	+	TSC_hg19_v1_chr3_+_129612705 AK127796	-212323	+	TSC_hg19_v1_chr3_-_129830276 BC083497	5254	-	TSC_hg19_v1_chr3_-_129830331 BC071676	5308	-	EU085556 NM_153264 AM906078	239377	+	NM_001136152|ALG1L2|644974|asparagine-linked glycosylation 1-like 2##NM_007117|TRH|7200|thyrotropin-releasing hormone##AK127796|LOC100507032|100507032|uncharacterized LOC100507032##EU085556|COL6A5|256076|collagen, type VI, alpha 5##NM_153264|COL6A5|256076|collagen, type VI, alpha 5##AM906078|COL6A5|256076|collagen, type VI, alpha 5	0.989712	CTCF.p2:0:0.990
chr4	162178015	162178158	reg1012586.p1	10.122	+	AK294459 NM_014247	-1989089	+	AK058100 NM_152543	-2221754	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-2487801	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	907065	-	TSC_hg19_v1_chr4_-_164088002 AK097352	1909906	-	TSC_hg19_v1_chr4_-_164088043 AK308601	1909951	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.614939	CTCF.p2:-26:0.615
chr8	91007920	91008047	reg1011021.p2	10.122	+	TSC_hg19_v1_chr8_-_90996896 AK001017 AK289848 BC071590 BC040519 BX640816 NM_002485 AK312410	-11079	-	TSC_hg19_v1_chr8_-_90996804 AB528582 BC143065 BC143066 BC108650 BC016762 BC005293 AF058696 AF051334 AK223256 BC146797 BC136802 BC136803 BC144413	-11151	-	BC031054 NM_001126111 TSC_hg19_v1_chr8_+_90914816	-93189	+	NM_001359 BC105080 BC105082 BC143669 TSC_hg19_v1_chr8_+_91013704 AK300069 L26050	5666	+	AB529128 X06661 BC006478 AK054881 AK312491 BC020864 NM_004929	87032	-	AK300583 AK123958 AL834364 TSC_hg19_v1_chr8_-_91657856	649815	-	AK001017|NBN|4683|nibrin##AK289848|NBN|4683|nibrin##BC071590|NBN|4683|nibrin##BC040519|NBN|4683|nibrin##BX640816|NBN|4683|nibrin##NM_002485|NBN|4683|nibrin##AK312410|NBN|4683|nibrin##BC143065|NBN|4683|nibrin##BC143066|NBN|4683|nibrin##BC108650|NBN|4683|nibrin##BC016762|NBN|4683|nibrin##BC005293|NBN|4683|nibrin##AF058696|NBN|4683|nibrin##AF051334|NBN|4683|nibrin##AK223256|NBN|4683|nibrin##BC146797|NBN|4683|nibrin##BC136802|NBN|4683|nibrin##BC136803|NBN|4683|nibrin##BC144413|NBN|4683|nibrin##BC031054|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_001126111|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_001359|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105080|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105082|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC143669|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK300069|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##L26050|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##X06661|CALB1|793|calbindin 1, 28kDa##BC006478|CALB1|793|calbindin 1, 28kDa##AK054881|CALB1|793|calbindin 1, 28kDa##AK312491|CALB1|793|calbindin 1, 28kDa##BC020864|CALB1|793|calbindin 1, 28kDa##NM_004929|CALB1|793|calbindin 1, 28kDa##AK300583|TMEM64|169200|transmembrane protein 64##AK123958|TMEM64|169200|transmembrane protein 64##AL834364|TMEM64|169200|transmembrane protein 64	0.053585	
chrX	27204910	27205045	reg1011797.p1	10.122	+	AK097561 BC067286 NM_173523	-994421	+	NM_173699 BC029525 AK057361	-1048491	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-2170904	-	BC157859 NM_001136533	559948	+	AK057527 NM_182506 BC101307 BC101309 BC101310	621138	+	AK128123 NM_001017930	794588	-	AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##NM_139058|ARX|170302|aristaless related homeobox##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	0.977142	CTCF.p2:17:0.977
chr12	63193026	63193149	reg1011279.p1	10.121	+	BC136288 AK098456 NM_175895	-195877	-	AK022671 TSC_hg19_v1_chr12_+_62954346	-238776	+	BC042679 AB017814 AB384555 TSC_hg19_v1_chr12_+_62861012	-332172	+	TSC_hg19_v1_chr12_-_63328666 NM_020700 BC157843	135618	-	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	135838	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	351584	-	BC136288|C12orf61|283416|chromosome 12 open reading frame 61##AK098456|C12orf61|283416|chromosome 12 open reading frame 61##NM_175895|C12orf61|283416|chromosome 12 open reading frame 61##AK022671|MON2|23041|MON2 homolog (S. cerevisiae)##AB017814|MON2|23041|MON2 homolog (S. cerevisiae)##NM_020700|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC157843|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A	0.720912	CTCF.p2:14:0.721
chr1	65528863	65529003	reg1013778.p1	10.121	+	TSC_hg19_v1_chr1_-_65432203 BC111401	-96705	-	TSC_hg19_v1_chr1_-_65432181 BC062431 BC009079 NM_002227	-96919	-	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	-318134	+	TSC_hg19_v1_chr1_+_65613263 NM_203464 BC146653 BC016180 AK309057 BC066944 NM_001005353	84428	+	TSC_hg19_v1_chr1_+_65613835 NM_013410 AK025926 AK313611 X60673	84915	+	TSC_hg19_v1_chr1_+_65613971 BC040224 BC136886 BC136887 BC148270 CR456830 CU688216 DQ892294 DQ895494	85097	+	BC111401|JAK1|3716|Janus kinase 1##BC062431|JAK1|3716|Janus kinase 1##BC009079|JAK1|3716|Janus kinase 1##NM_002227|JAK1|3716|Janus kinase 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_203464|AK4|205|adenylate kinase 4##BC146653|AK4|205|adenylate kinase 4##BC016180|AK4|205|adenylate kinase 4##AK309057|AK4|205|adenylate kinase 4##BC066944|AK4|205|adenylate kinase 4##NM_001005353|AK4|205|adenylate kinase 4##NM_013410|AK4|205|adenylate kinase 4##AK025926|AK4|205|adenylate kinase 4##AK313611|AK4|205|adenylate kinase 4##X60673|AK4|205|adenylate kinase 4##BC040224|AK4|205|adenylate kinase 4##BC136886|AK4|205|adenylate kinase 4##BC136887|AK4|205|adenylate kinase 4##BC148270|AK4|205|adenylate kinase 4##CR456830|AK4|205|adenylate kinase 4##DQ892294|AK4|205|adenylate kinase 4##DQ895494|AK4|205|adenylate kinase 4	0.938966	CTCF.p2:-19:0.939
chr19	49729416	49729540	reg1010937.p1	10.121	+	AK000048 TSC_hg19_v1_chr19_+_49669495	-60028	+	TSC_hg19_v1_chr19_+_49661048 AK074664 AF497623 AK292862 AY297044 AY297045 AY297046 AY046396 AJ575813 BC132727 BC144122 BC144123 AK295820	-68412	+	AK307897 NM_001195227 NM_017636 TSC_hg19_v1_chr19_+_49661029	-68465	+	BC034948 BC039336 NM_014037	98975	-	TSC_hg19_v1_chr19_+_49838662 AK301016	109180	+	TSC_hg19_v1_chr19_+_49838683 NM_001040031 NM_001774 AK301328	109200	+	AK000048|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AF497623|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK292862|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297044|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297045|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297046|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY046396|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AJ575813|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC132727|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144122|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144123|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK295820|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK307897|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_001195227|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_017636|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC034948|SLC6A16|28968|solute carrier family 6, member 16##NM_014037|SLC6A16|28968|solute carrier family 6, member 16##AK301016|CD37|951|CD37 molecule##NM_001040031|CD37|951|CD37 molecule##NM_001774|CD37|951|CD37 molecule##AK301328|CD37|951|CD37 molecule	0.999808	CTCF.p2:-10:1.000
chr6	153185122	153185274	reg1013364.p1	10.121	+	AK313950 BC009794 NM_003381 NM_194435 AK291959 M36634	-113212	+	NM_025107 AF527367 AK024922 BC128463 BC128464 GU997693 AK021612 BC022556 AL834500 CU692694	-166093	+	AF495910 NM_182961	-226665	-	AY079515 DQ891922 DQ895106 BC018905 AF129535 TSC_hg19_v1_chr6_-_153304175 AK026197 AK314456 NM_012177	118949	-	AJ420499 TSC_hg19_v1_chr6_-_153304715 AK055221 NM_001142522	119466	-	TSC_hg19_v1_chr6_-_153323825 AK027684 CU676987 CU680090 AK001037 AK225321 AK225970 AK290662 BC014428	138614	-	AK313950|VIP|7432|vasoactive intestinal peptide##BC009794|VIP|7432|vasoactive intestinal peptide##NM_003381|VIP|7432|vasoactive intestinal peptide##NM_194435|VIP|7432|vasoactive intestinal peptide##AK291959|VIP|7432|vasoactive intestinal peptide##M36634|VIP|7432|vasoactive intestinal peptide##NM_025107|MYCT1|80177|myc target 1##AF527367|MYCT1|80177|myc target 1##AK024922|MYCT1|80177|myc target 1##BC128463|MYCT1|80177|myc target 1##BC128464|MYCT1|80177|myc target 1##GU997693|MYCT1|80177|myc target 1##AK021612|MYCT1|80177|myc target 1##BC022556|MYCT1|80177|myc target 1##AL834500|MYCT1|80177|myc target 1##AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AY079515|FBXO5|26271|F-box protein 5##DQ891922|FBXO5|26271|F-box protein 5##DQ895106|FBXO5|26271|F-box protein 5##BC018905|FBXO5|26271|F-box protein 5##AF129535|FBXO5|26271|F-box protein 5##AK026197|FBXO5|26271|F-box protein 5##AK314456|FBXO5|26271|F-box protein 5##NM_012177|FBXO5|26271|F-box protein 5##AJ420499|FBXO5|26271|F-box protein 5##AK055221|FBXO5|26271|F-box protein 5##NM_001142522|FBXO5|26271|F-box protein 5##AK027684|MTRF1L|54516|mitochondrial translational release factor 1-like##AK225321|MTRF1L|54516|mitochondrial translational release factor 1-like##AK225970|MTRF1L|54516|mitochondrial translational release factor 1-like##AK290662|MTRF1L|54516|mitochondrial translational release factor 1-like##BC014428|MTRF1L|54516|mitochondrial translational release factor 1-like	0.995792	CTCF.p2:-5:0.996
chrX	41619199	41619325	reg1010847.p2	10.121	+	BC070180 NM_080817 AK122626 AK313702 AL832460	-35842	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	-70995	+	AJ278865 AF254868 NM_022567	-312563	+	AB208859 AB590064 HQ258518 AY705392 AF035582 BC117311 BC143454 BC143456 AF032119 NM_001126054 NM_001126055 NM_003688 AK313399	163063	-	BC044787 TSC_hg19_v1_chrX_+_43514289	1894961	+	TSC_hg19_v1_chrX_+_43515423 NM_000240 AK223499	1896152	+	BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##AJ278865|NYX|60506|nyctalopin##AF254868|NYX|60506|nyctalopin##NM_022567|NYX|60506|nyctalopin##AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC044787|MAOA|4128|monoamine oxidase A##NM_000240|MAOA|4128|monoamine oxidase A##AK223499|MAOA|4128|monoamine oxidase A	0.96407	CTCF.p2:8:0.964
chr10	22863018	22863159	reg1007459.p2	10.120	+	TSC_hg19_v1_chr10_+_22726003 AK295718	-137089	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-228632	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-252923	+	AK294817 TSC_hg19_v1_chr10_-_23003038	139949	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	140402	-	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	353893	+	AK295718|LOC100289455|100289455|uncharacterized LOC100289455##NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3	0.981082	CTCF.p2:-1:0.981
chr14	55518227	55518386	reg1010895.p2	10.120	+	TSC_hg19_v1_chr14_+_55493974 NM_080867 NM_199421 BX161418 CR933659 BC060790 AK124083	-24377	+	TSC_hg19_v1_chr14_-_55493818 BC043349 NM_001008396 NM_007086	-24495	-	TSC_hg19_v1_chr14_-_55493780 BC000622 BC005040 AK293005 BC063041	-24521	-	TSC_hg19_v1_chr14_+_55518364 NM_144578 AK315501	34	+	TSC_hg19_v1_chr14_+_55518382 AL834285	71	+	AK025580 TSC_hg19_v1_chr14_+_55518408 BC015621	125	+	NM_080867|SOCS4|122809|suppressor of cytokine signaling 4##NM_199421|SOCS4|122809|suppressor of cytokine signaling 4##BX161418|SOCS4|122809|suppressor of cytokine signaling 4##CR933659|SOCS4|122809|suppressor of cytokine signaling 4##BC060790|SOCS4|122809|suppressor of cytokine signaling 4##AK124083|SOCS4|122809|suppressor of cytokine signaling 4##BC043349|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_001008396|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_007086|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC000622|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC005040|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##AK293005|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC063041|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_144578|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##AK315501|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##AL834285|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##AK025580|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##BC015621|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like	0.173175	
chr6	31519270	31519388	reg1011270.p1	10.120	+	TSC_hg19_v1_chr6_+_31515391 X77909 BC105064 BC105068 BC143671 AK313888 AF097419 AF097420 AF097421 AF097422 AF097423 AF097424 AF097425 AF097426 AF097427 AF097428 AF097429 AB527477 EU446511	-3898	+	AK291893 NM_001144961 NM_005007 TSC_hg19_v1_chr6_+_31515371	-3959	+	NM_001144962 NM_001144963 AK300818	-4669	+	NM_001159740	20546	+	D12614 NM_000595 DQ123822 X01393 D00102	20804	+	TSC_hg19_v1_chr6_+_31543344 AK314960 NM_000594 BC028148 X01394 M10988 DQ891662 DQ894849 AB464327 HQ201306 FJ795028	24100	+	X77909|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##BC105064|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##BC105068|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##BC143671|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AK313888|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AF097419|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AF097420|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AF097421|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AF097422|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AF097423|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AF097424|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AF097425|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AF097426|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AF097427|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AF097428|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AF097429|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##EU446511|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AK291893|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##NM_001144961|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##NM_005007|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##NM_001144962|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##NM_001144963|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AK300818|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##NM_001159740|LTA|4049|lymphotoxin alpha (TNF superfamily, member 1)##D12614|LTA|4049|lymphotoxin alpha (TNF superfamily, member 1)##NM_000595|LTA|4049|lymphotoxin alpha (TNF superfamily, member 1)##DQ123822|LTA|4049|lymphotoxin alpha (TNF superfamily, member 1)##X01393|LTA|4049|lymphotoxin alpha (TNF superfamily, member 1)##D00102|LTA|4049|lymphotoxin alpha (TNF superfamily, member 1)##AK314960|TNF|7124|tumor necrosis factor##NM_000594|TNF|7124|tumor necrosis factor##BC028148|TNF|7124|tumor necrosis factor##X01394|TNF|7124|tumor necrosis factor##M10988|TNF|7124|tumor necrosis factor##DQ891662|TNF|7124|tumor necrosis factor##DQ894849|TNF|7124|tumor necrosis factor##HQ201306|TNF|7124|tumor necrosis factor##FJ795028|TNF|7124|tumor necrosis factor	0.44778	CTCF.p2:-10:0.429
chr14	102983268	102983369	reg1010185.p2	10.118	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-7204	-	AK291868 TSC_hg19_v1_chr14_-_102976070	-7285	-	TSC_hg19_v1_chr14_+_102829428 BC030791 AK296395 AK299690 BC142667 BC142715 AK127721	-153893	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	75680	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	75843	+	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	260501	+	BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##AK291868|ANKRD9|122416|ankyrin repeat domain 9##BC030791|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK296395|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK299690|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142667|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142715|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK127721|TECPR2|9895|tectonin beta-propeller repeat containing 2##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##AF155595|RCOR1|23186|REST corepressor 1##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3	0.998447	CTCF.p2:20:0.998
chr2	186155923	186156044	reg1010332.p1	10.118	+	BC136602 TSC_hg19_v1_chr2_+_185463544	-692491	+	BC142612 TSC_hg19_v1_chr2_+_185463319	-692678	+	BC150198 TSC_hg19_v1_chr2_+_185463252 AK131402	-692740	+	NM_173651	447371	+	TSC_hg19_v1_chr2_+_187350986 AF220184 NM_018471 AK298615 AK001901 AK297658 AF289586	1194947	+	TSC_hg19_v1_chr2_+_187351010 BC012336 AF161421 AF109366	1195027	+	BC136602|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A##BC150198|ZNF804A|91752|zinc finger protein 804A##AK131402|ZNF804A|91752|zinc finger protein 804A##NM_173651|FSIP2|401024|fibrous sheath interacting protein 2##AF220184|ZC3H15|55854|zinc finger CCCH-type containing 15##NM_018471|ZC3H15|55854|zinc finger CCCH-type containing 15##AK298615|ZC3H15|55854|zinc finger CCCH-type containing 15##AK001901|ZC3H15|55854|zinc finger CCCH-type containing 15##AK297658|ZC3H15|55854|zinc finger CCCH-type containing 15##AF289586|ZC3H15|55854|zinc finger CCCH-type containing 15##BC012336|ZC3H15|55854|zinc finger CCCH-type containing 15##AF161421|ZC3H15|55854|zinc finger CCCH-type containing 15##AF109366|ZC3H15|55854|zinc finger CCCH-type containing 15	0.042256	
chr7	35754648	35754788	reg1013319.p1	10.118	+	TSC_hg19_v1_chr7_-_35734795 NM_022373	-19940	-	BC020264 TSC_hg19_v1_chr7_-_35734751 AK055708	-19979	-	TSC_hg19_v1_chr7_-_35734533 BC005091	-20122	-	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	85992	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	86115	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	86134	+	NM_022373|HERPUD2|64224|HERPUD family member 2##BC020264|HERPUD2|64224|HERPUD family member 2##AK055708|HERPUD2|64224|HERPUD family member 2##BC005091|HERPUD2|64224|HERPUD family member 2##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7	0.017617	
chr5	78429581	78429695	reg1008819.p3	10.117	+	NM_001713 AK298308 AK303780 AK315224 BC012616 U50929 AB590690	-21983	+	AF257473 TSC_hg19_v1_chr5_+_78365591 AK298298 AK315520 BC020665 DQ891370 DQ894550 AB590411 CU676622	-64045	+	NM_001178005 NM_017614 TSC_hg19_v1_chr5_+_78365558	-64084	+	TSC_hg19_v1_chr5_+_78531933 NM_152405	102253	+	TSC_hg19_v1_chr5_+_78532339 AB590691	102766	+	BC047438 NM_004272	380040	-	NM_001713|BHMT|635|betaine--homocysteine S-methyltransferase##AK298308|BHMT|635|betaine--homocysteine S-methyltransferase##AK303780|BHMT|635|betaine--homocysteine S-methyltransferase##AK315224|BHMT|635|betaine--homocysteine S-methyltransferase##BC012616|BHMT|635|betaine--homocysteine S-methyltransferase##U50929|BHMT|635|betaine--homocysteine S-methyltransferase##AF257473|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK298298|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK315520|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##BC020665|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ891370|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ894550|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_001178005|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_017614|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor##BC047438|HOMER1|9456|homer homolog 1 (Drosophila)##NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)	0.91807	CTCF.p2:-3:0.918
chrX	15489259	15489387	reg1008981.p1	10.115	+	D89630 AJ000185 AX740237 BC027948 AK313173 AK223160 NM_004469	-86822	-	NM_002641 NM_020473 TSC_hg19_v1_chrX_-_15353680	-135633	-	AK303538 TSC_hg19_v1_chrX_-_15353667	-135655	-	BC002517 TSC_hg19_v1_chrX_-_15511423 AK309656 Y07868 Y07867	22097	-	NM_001018109 NM_003662	22387	-	NM_203281 AK291824 AK313568 X83107	29646	+	D89630|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##AJ000185|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##BC027948|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##AK313173|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##AK223160|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##NM_004469|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##NM_002641|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##NM_020473|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##AK303538|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##BC002517|PIR|8544|pirin (iron-binding nuclear protein)##AK309656|PIR|8544|pirin (iron-binding nuclear protein)##Y07868|PIR|8544|pirin (iron-binding nuclear protein)##Y07867|PIR|8544|pirin (iron-binding nuclear protein)##NM_001018109|PIR|8544|pirin (iron-binding nuclear protein)##NM_003662|PIR|8544|pirin (iron-binding nuclear protein)##NM_203281|BMX|660|BMX non-receptor tyrosine kinase##AK291824|BMX|660|BMX non-receptor tyrosine kinase##AK313568|BMX|660|BMX non-receptor tyrosine kinase##X83107|BMX|660|BMX non-receptor tyrosine kinase	0.99804	CTCF.p2:-2:0.998
chr17	21023086	21023186	reg1011133.p1	10.114	+	TSC_hg19_v1_chr17_+_20978860 AB593144	-44255	+	TSC_hg19_v1_chr17_-_20946322 AB590105 AB028986 NM_015276	-76864	-	CU686685 BC068597 NM_001004306	-223744	-	TSC_hg19_v1_chr17_+_21030251 NM_015510 AL117567 AF151851 BC004126 BC009679 AK124055 CR457124	7140	+	TSC_hg19_v1_chr17_-_21117475 BT006768 AK311965 BC020815	94318	-	TSC_hg19_v1_chr17_-_21117480 BC002819	94352	-	AB028986|USP22|23326|ubiquitin specific peptidase 22##NM_015276|USP22|23326|ubiquitin specific peptidase 22##BC068597|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001004306|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_015510|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AL117567|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AF151851|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC004126|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC009679|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AK124055|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##CR457124|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BT006768|TMEM11|8834|transmembrane protein 11##AK311965|TMEM11|8834|transmembrane protein 11##BC020815|TMEM11|8834|transmembrane protein 11##BC002819|TMEM11|8834|transmembrane protein 11	0.012963	
chr1	157465962	157466086	reg1011574.p2	10.113	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-357741	-	TSC_hg19_v1_chr1_-_157108158 L16464	-357874	-	AK131392 NM_001004341	-396425	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	56206	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	101777	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	204503	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.877079	CTCF.p2:4:0.877
chr12	94496127	94496248	reg1011346.p3	10.113	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-425004	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-530586	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-531367	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	46317	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	357344	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	357455	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.967768	CTCF.p2:13:0.968
chr18	40851943	40852050	reg1011038.p2	10.113	+	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-156427	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-1316763	+	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	-1316797	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	5433	-	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	1408118	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	1408872	+	AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1	0.972288	CTCF.p2:-4:0.972
chr5	38420888	38421017	reg1011118.p1	10.113	+	NM_182798 AK097549 BC031251	-17311	+	CU687828 TSC_hg19_v1_chr5_+_38258922	-162063	+	BX647551 TSC_hg19_v1_chr5_+_38258660 BC063822 AK291602	-162286	+	NM_182801 BC033177 AK092994 AX747843 BC033188	24672	+	TSC_hg19_v1_chr5_-_38556749 AK290059 NM_001127671	135776	-	AK308158 AK309882 NM_002310	174554	-	NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BX647551|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC063822|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK291602|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_182801|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033177|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK092994|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033188|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha##AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha##AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha	0.999732	CTCF.p2:-16:1.000
chr14	71422699	71422824	reg1010950.p1	10.112	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-48310	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-48628	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-146952	-	AF090989 AF090990 NM_015556	573280	+	AK294895 NM_001204423	976055	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	976392	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.929058	CTCF.p2:26:0.929
chr17	72642555	72642678	reg1009634.p2	10.111	+	BC100888 BC100889 BC100890 AK298031 AF395839 BX648376 AK303545 NM_181449	-22771	-	EF137868 NM_001115152 AY358148	-54221	-	AK056444 NM_152460	-61560	+	NM_175738 TSC_hg19_v1_chr17_+_72667269 BC040547 AK290202	24651	+	TSC_hg19_v1_chr17_+_72667316 AK054846	24701	+	AF251706 AY303545 AK315165 TSC_hg19_v1_chr17_-_72709081 AK298752 AY358545 AK092757 AX747710 NM_139018 BC028199	66451	-	BC100888|CD300E|342510|CD300e molecule##BC100889|CD300E|342510|CD300e molecule##BC100890|CD300E|342510|CD300e molecule##AK298031|CD300E|342510|CD300e molecule##AF395839|CD300E|342510|CD300e molecule##BX648376|CD300E|342510|CD300e molecule##AK303545|CD300E|342510|CD300e molecule##NM_181449|CD300E|342510|CD300e molecule##EF137868|CD300LD|100131439|CD300 molecule-like family member d##NM_001115152|CD300LD|100131439|CD300 molecule-like family member d##AY358148|CD300LD|100131439|CD300 molecule-like family member d##AK056444|C17orf77|146723|chromosome 17 open reading frame 77##NM_152460|C17orf77|146723|chromosome 17 open reading frame 77##NM_175738|RAB37|326624|RAB37, member RAS oncogene family##BC040547|RAB37|326624|RAB37, member RAS oncogene family##AK290202|RAB37|326624|RAB37, member RAS oncogene family##AK054846|RAB37|326624|RAB37, member RAS oncogene family##AF251706|CD300LF|146722|CD300 molecule-like family member f##AY303545|CD300LF|146722|CD300 molecule-like family member f##AK315165|CD300LF|146722|CD300 molecule-like family member f##AK298752|CD300LF|146722|CD300 molecule-like family member f##AY358545|CD300LF|146722|CD300 molecule-like family member f##AK092757|CD300LF|146722|CD300 molecule-like family member f##NM_139018|CD300LF|146722|CD300 molecule-like family member f##BC028199|CD300LF|146722|CD300 molecule-like family member f	0.683617	CTCF.p2:2:0.671
chr3	127510070	127510218	reg1013200.p1	10.111	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-118327	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-162112	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-192860	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	31286	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	31998	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	124174	+	NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.0	
chr22	26715168	26715265	reg1011023.p2	10.110	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	-149553	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	-149719	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	-149779	+	TSC_hg19_v1_chr22_+_26825246 NM_020437 BC036753 AK315112	110108	+	AK097886 BC035614 AK054717 AL365512 NM_152841	160247	-	TSC_hg19_v1_chr22_-_26879750 AK057648 AK290211	164526	-	CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4##BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4##AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4##AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4##NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4##AK057648|HPS4|89781|Hermansky-Pudlak syndrome 4##AK290211|HPS4|89781|Hermansky-Pudlak syndrome 4	0.910539	CTCF.p2:-11:0.911
chr8	104385565	104385690	reg1010743.p2	10.110	+	BC014245 NM_138455 AY136825 TSC_hg19_v1_chr8_+_104383792	-1828	+	TSC_hg19_v1_chr8_+_104383774 AK130063 BC021025 AY358914 AK300273	-1887	+	NM_001164616 NM_003506 TSC_hg19_v1_chr8_+_104311103 AK299341 AK296824 BC060836 BC036106 AB012911 AK304092 AK316544	-74536	+	AK027799 NM_015420 AK074725	41331	+	TSC_hg19_v1_chr8_-_104427269 BC021893 AF283645 AK027787 AK300748	41660	-	TSC_hg19_v1_chr8_-_104427336 AK125492 AK027531	41702	-	BC014245|CTHRC1|115908|collagen triple helix repeat containing 1##NM_138455|CTHRC1|115908|collagen triple helix repeat containing 1##AY136825|CTHRC1|115908|collagen triple helix repeat containing 1##AK130063|CTHRC1|115908|collagen triple helix repeat containing 1##BC021025|CTHRC1|115908|collagen triple helix repeat containing 1##AY358914|CTHRC1|115908|collagen triple helix repeat containing 1##AK300273|CTHRC1|115908|collagen triple helix repeat containing 1##NM_001164616|FZD6|8323|frizzled family receptor 6##NM_003506|FZD6|8323|frizzled family receptor 6##AK299341|FZD6|8323|frizzled family receptor 6##AK296824|FZD6|8323|frizzled family receptor 6##BC060836|FZD6|8323|frizzled family receptor 6##BC036106|FZD6|8323|frizzled family receptor 6##AB012911|FZD6|8323|frizzled family receptor 6##AK304092|FZD6|8323|frizzled family receptor 6##AK316544|FZD6|8323|frizzled family receptor 6##AK027799|DCAF13|25879|DDB1 and CUL4 associated factor 13##NM_015420|DCAF13|25879|DDB1 and CUL4 associated factor 13##AK074725|DCAF13|25879|DDB1 and CUL4 associated factor 13##BC021893|SLC25A32|81034|solute carrier family 25, member 32##AF283645|SLC25A32|81034|solute carrier family 25, member 32##AK027787|SLC25A32|81034|solute carrier family 25, member 32##AK300748|SLC25A32|81034|solute carrier family 25, member 32##AK125492|SLC25A32|81034|solute carrier family 25, member 32##AK027531|SLC25A32|81034|solute carrier family 25, member 32	0.999742	CTCF.p2:-8:1.000
chr8	33539130	33539239	reg1011326.p1	10.110	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-81689	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	-81725	-	TSC_hg19_v1_chr8_-_33457295 BC067804	-81897	-	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	1553803	+	NM_001031836 AK302391 BC028701	3102686	+	TSC_hg19_v1_chr8_-_37457377 AK025743	3918184	-	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC067804|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AK025743|LOC157860|157860|uncharacterized LOC157860	0.146187	
chr16	28761630	28761752	reg1011721.p1	10.109	+	BC157849 AB527254 DQ891632 DQ894822 TSC_hg19_v1_chr16_+_28723065	-38669	+	BC107692 NM_001037808 NM_003752 TSC_hg19_v1_chr16_+_28722786 AK301183 NM_001099661 AK301233 AK304500 AK055366 AK299421 AK303790 BC001571 BC000533 AY762099 AK293264 AK000739 BC071705	-38872	+	AK292155 NM_001199142 BC157842	-61758	+	TSC_hg19_v1_chr16_+_28834364 AK289981	72674	+	TSC_hg19_v1_chr16_+_28834372 BC068012	72697	+	TSC_hg19_v1_chr16_+_28834434 AJ317970 AJ317971 AJ317972 AJ317973 AJ317974 NM_007245 NM_145714 NM_148414 NM_148415 NM_148416 BC136584 BC144269	72735	+	BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK289981|ATXN2L|11273|ataxin 2-like##BC068012|ATXN2L|11273|ataxin 2-like##AJ317970|ATXN2L|11273|ataxin 2-like##AJ317971|ATXN2L|11273|ataxin 2-like##AJ317972|ATXN2L|11273|ataxin 2-like##AJ317973|ATXN2L|11273|ataxin 2-like##AJ317974|ATXN2L|11273|ataxin 2-like##NM_007245|ATXN2L|11273|ataxin 2-like##NM_145714|ATXN2L|11273|ataxin 2-like##NM_148414|ATXN2L|11273|ataxin 2-like##NM_148415|ATXN2L|11273|ataxin 2-like##NM_148416|ATXN2L|11273|ataxin 2-like##BC136584|ATXN2L|11273|ataxin 2-like##BC144269|ATXN2L|11273|ataxin 2-like	1.177693	CTCF.p2:-16:0.652	CTCF.p2:28:0.525
chr5	107596415	107596535	reg1010755.p2	10.109	+	AK308672 NM_001962 U26403	-589885	-	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-4697994	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-5002018	+	TSC_hg19_v1_chr5_-_107717106 AK126722	120655	-	BC063316 NM_001163315	121323	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	467505	-	AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AB593118|HP07349|100652853|uncharacterized protein HP07349	0.999921	CTCF.p2:-16:1.000
chrX	46618824	46618968	reg1012867.p1	10.109	+	TSC_hg19_v1_chrX_-_46618608 BC094742	-266	-	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	-367	-	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	-185618	+	NM_006915 AJ007590 TSC_hg19_v1_chrX_+_46696391 BC027851	77481	+	BC043348 BC053530 TSC_hg19_v1_chrX_+_46696426	77530	+	TSC_hg19_v1_chrX_+_46696479 AK312555 CU692158	77608	+	BC094742|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC043348|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC053530|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AK312555|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	0.170588	
chr10	49909302	49909435	reg1011648.p1	10.108	+	AK127650 NM_020945	-15853	+	TSC_hg19_v1_chr10_+_49892917 BC034937	-16478	+	TSC_hg19_v1_chr10_-_49864302 AK055937	-45063	-	NM_001006939 BC036722	212912	-	TSC_hg19_v1_chr10_-_50323537 BC041414 AK297931 AK056299 NM_001031746 NM_144984	414155	-	BC029839 BC047597 NM_001164484	432690	-	AK127650|WDFY4|57705|WDFY family member 4##NM_020945|WDFY4|57705|WDFY family member 4##BC034937|WDFY4|57705|WDFY family member 4##AK055937|ARHGAP22|58504|Rho GTPase activating protein 22##NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18##BC041414|VSTM4|196740|V-set and transmembrane domain containing 4##AK297931|VSTM4|196740|V-set and transmembrane domain containing 4##AK056299|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001031746|VSTM4|196740|V-set and transmembrane domain containing 4##NM_144984|VSTM4|196740|V-set and transmembrane domain containing 4##BC029839|FAM170B|170370|family with sequence similarity 170, member B##BC047597|FAM170B|170370|family with sequence similarity 170, member B##NM_001164484|FAM170B|170370|family with sequence similarity 170, member B	0.329785	CTCF.p2:16:0.330
chr10	126092159	126092278	reg1010032.p1	10.107	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	-239065	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-240319	-	BC137492 BC146862 AY358565 NM_198148	-440722	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	15255	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	15300	-	NM_001146340 TSC_hg19_v1_chr10_-_126138606	46359	-	BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##NM_001146340|NKX1-2|390010|NK1 homeobox 2	0.992728	CTCF.p2:13:0.993
chr15	87286649	87286763	reg1012763.p1	10.107	+	NM_152336	-601465	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-948511	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-948609	-	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	1513260	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	1723922	-	AB049944 NM_022839 NM_176805	1723977	+	NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11	0.211555	CTCF.p2:12:0.212
chr12	26250108	26250240	reg1011881.p2	10.106	+	NM_001164746 AK292333	-44681	+	AK290055 NM_001164747	-123487	+	TSC_hg19_v1_chr12_+_26111964 NM_001164748 NM_007211 BC030021 AB093206 AY665468 AY665469 AY665470 AY665471	-138173	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	27747	-	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	98117	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	98411	+	NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AK290055|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_001164747|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_001164748|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_007211|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##BC030021|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AB093206|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665468|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665469|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665470|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665471|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)	0.989581	CTCF.p2:-3:0.990
chr19	42289599	42289720	reg1013471.p1	10.106	+	NM_002483 TSC_hg19_v1_chr19_+_42259437 AK312542 M29541 M18728 M18216 BC005008 BT009774	-30188	+	M16234 TSC_hg19_v1_chr19_+_42221424	-68241	+	TSC_hg19_v1_chr19_+_42212619 CR749337 DQ890840 DQ896753 CU689928 M15042 X16455	-77023	+	AK298694 NM_001815 D90277 D90278 L00692 L00693 BC106728	10893	+	AY358726 NM_173506	58848	-	AK057404 AK301822 NM_001040283 BC039266 BC029202	59412	+	NM_002483|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##AK312542|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M29541|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18728|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18216|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BC005008|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BT009774|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M16234|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##CR749337|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ890840|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ896753|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M15042|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##X16455|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##NM_001815|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90277|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90278|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00692|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00693|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##BC106728|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##AY358726|LYPD4|147719|LY6/PLAUR domain containing 4##NM_173506|LYPD4|147719|LY6/PLAUR domain containing 4##AK057404|DMRTC2|63946|DMRT-like family C2##AK301822|DMRTC2|63946|DMRT-like family C2##NM_001040283|DMRTC2|63946|DMRT-like family C2##BC039266|DMRTC2|63946|DMRT-like family C2##BC029202|DMRTC2|63946|DMRT-like family C2	0.995132	CTCF.p2:8:0.995
chr6	142888077	142888189	reg1009784.p1	10.106	+	TSC_hg19_v1_chr6_+_142623443 BX640873	-264727	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-265064	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-377504	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	378195	-	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	493862	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	493903	+	BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1	0.938181	CTCF.p2:-3:0.938
chr9	88225123	88225244	reg1009708.p2	10.106	+	U12140 TSC_hg19_v1_chr9_+_87285349	-939851	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-940431	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-940487	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	131688	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	330891	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	330995	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.999732	CTCF.p2:1:1.000
chr16	89819115	89819233	reg1013086.p1	10.105	+	NM_001113525 AK026482	-31209	+	TSC_hg19_v1_chr16_+_89787441 NM_152287 AK056405 BC105959 BC107603 BC111408	-31699	+	TSC_hg19_v1_chr16_-_89787328 AB527115 NM_004913	-31847	-	TSC_hg19_v1_chr16_-_89831446 AK301168	12280	-	BT007366 TSC_hg19_v1_chr16_-_89883059 AK299282 X99226 BC022498 BC008979 BC120979 BC127633 BC064540 BC120978 BC141971 BC141972 NM_000135 NM_001018112	63871	-	TSC_hg19_v1_chr16_+_89894882 BC111030 NM_032451 AJ422077 BC011119	75731	+	NM_001113525|ZNF276|92822|zinc finger protein 276##AK026482|ZNF276|92822|zinc finger protein 276##NM_152287|ZNF276|92822|zinc finger protein 276##AK056405|ZNF276|92822|zinc finger protein 276##BC105959|ZNF276|92822|zinc finger protein 276##BC107603|ZNF276|92822|zinc finger protein 276##BC111408|ZNF276|92822|zinc finger protein 276##NM_004913|C16orf7|9605|chromosome 16 open reading frame 7##AK301168|FANCA|2175|Fanconi anemia, complementation group A##BT007366|FANCA|2175|Fanconi anemia, complementation group A##AK299282|FANCA|2175|Fanconi anemia, complementation group A##X99226|FANCA|2175|Fanconi anemia, complementation group A##BC022498|FANCA|2175|Fanconi anemia, complementation group A##BC008979|FANCA|2175|Fanconi anemia, complementation group A##BC120979|FANCA|2175|Fanconi anemia, complementation group A##BC127633|FANCA|2175|Fanconi anemia, complementation group A##BC064540|FANCA|2175|Fanconi anemia, complementation group A##BC120978|FANCA|2175|Fanconi anemia, complementation group A##BC141971|FANCA|2175|Fanconi anemia, complementation group A##BC141972|FANCA|2175|Fanconi anemia, complementation group A##NM_000135|FANCA|2175|Fanconi anemia, complementation group A##NM_001018112|FANCA|2175|Fanconi anemia, complementation group A##BC111030|SPIRE2|84501|spire homolog 2 (Drosophila)##NM_032451|SPIRE2|84501|spire homolog 2 (Drosophila)##AJ422077|SPIRE2|84501|spire homolog 2 (Drosophila)##BC011119|SPIRE2|84501|spire homolog 2 (Drosophila)	0.830069	CTCF.p2:-9:0.830
chr3	187432315	187432425	reg1010531.p1	10.105	+	BC068081 NM_001004312	-12026	-	BC032625 AK312177 TSC_hg19_v1_chr3_-_187388181 NM_001048	-44218	-	BC013161 NM_022147 AJ251832 AY562238 DQ891046 DQ894225	-346172	+	EU139066 NM_001134738	20311	-	S67779 NM_001130845	21895	-	BC142705 BC150184 Z21943 AK304325 AK308162 TSC_hg19_v1_chr3_-_187463257 BC146796	30874	-	BC068081|RTP2|344892|receptor (chemosensory) transporter protein 2##NM_001004312|RTP2|344892|receptor (chemosensory) transporter protein 2##BC032625|SST|6750|somatostatin##AK312177|SST|6750|somatostatin##NM_001048|SST|6750|somatostatin##BC013161|RTP4|64108|receptor (chemosensory) transporter protein 4##NM_022147|RTP4|64108|receptor (chemosensory) transporter protein 4##AJ251832|RTP4|64108|receptor (chemosensory) transporter protein 4##AY562238|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ891046|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ894225|RTP4|64108|receptor (chemosensory) transporter protein 4##EU139066|BCL6|604|B-cell CLL/lymphoma 6##NM_001134738|BCL6|604|B-cell CLL/lymphoma 6##S67779|BCL6|604|B-cell CLL/lymphoma 6##NM_001130845|BCL6|604|B-cell CLL/lymphoma 6##BC142705|BCL6|604|B-cell CLL/lymphoma 6##BC150184|BCL6|604|B-cell CLL/lymphoma 6##Z21943|BCL6|604|B-cell CLL/lymphoma 6##AK304325|BCL6|604|B-cell CLL/lymphoma 6##AK308162|BCL6|604|B-cell CLL/lymphoma 6##BC146796|BCL6|604|B-cell CLL/lymphoma 6	0.994515	CTCF.p2:7:0.995
chr19	11992156	11992275	reg1011727.p2	10.104	+	AL833935 NM_152262	-15372	+	TSC_hg19_v1_chr19_+_11925098 AK095252 NM_152357 BC035760	-67109	+	AK297479 NM_152356 AK096593	-82836	+	TSC_hg19_v1_chr19_+_11998643 BC051309 NM_021915 EU446913	6458	+	TSC_hg19_v1_chr19_+_12035889 AK299182 AK308305 AL136732 NM_144566 BC144406 BC136777	43703	+	AK092240 AK299224 AX747424 NM_001012753 BC105711 BC105712 BC105713	83667	+	AL833935|ZNF439|90594|zinc finger protein 439##NM_152262|ZNF439|90594|zinc finger protein 439##AK095252|ZNF440|126070|zinc finger protein 440##NM_152357|ZNF440|126070|zinc finger protein 440##BC035760|ZNF440|126070|zinc finger protein 440##AK297479|ZNF491|126069|zinc finger protein 491##NM_152356|ZNF491|126069|zinc finger protein 491##AK096593|ZNF491|126069|zinc finger protein 491##BC051309|ZNF69|7620|zinc finger protein 69##NM_021915|ZNF69|7620|zinc finger protein 69##EU446913|ZNF69|7620|zinc finger protein 69##AK299182|ZNF763|284390|zinc finger protein 763##AK308305|ZNF700|90592|zinc finger protein 700##AL136732|ZNF700|90592|zinc finger protein 700##NM_144566|ZNF700|90592|zinc finger protein 700##BC144406|ZNF700|90592|zinc finger protein 700##BC136777|ZNF700|90592|zinc finger protein 700##AK092240|ZNF763|284390|zinc finger protein 763##AK299224|ZNF763|284390|zinc finger protein 763##NM_001012753|ZNF763|284390|zinc finger protein 763##BC105711|ZNF763|284390|zinc finger protein 763##BC105712|ZNF763|284390|zinc finger protein 763##BC105713|ZNF763|284390|zinc finger protein 763	0.984858	CTCF.p2:-3:0.985
chr1	207970797	207970922	reg1011659.p1	10.102	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	-45376	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	-45466	+	NM_175710 BC109190 BC109191	-152372	+	BX640941 TSC_hg19_v1_chr1_-_208059392	88464	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	113524	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	113698	-	BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule	0.844649	CTCF.p2:3:0.845
chr11	58826019	58826163	reg1012879.p1	10.101	+	AK091965 AX747281 DQ084381 NM_001220496 NM_080661 AK055818	-115339	+	NM_001220494 AK300479 BC008353	-130954	+	BC021682 NM_145016 BC016789	-214103	-	TSC_hg19_v1_chr11_+_58874641 BC062456 NM_001142703 NM_001142704 NM_198947 BC005998 AK304258 AY457926 AK303520	48571	+	TSC_hg19_v1_chr11_-_58910222 AK124475 BC028022	84152	-	TSC_hg19_v1_chr11_+_58910331 AK092237 AX747422 NM_001142519 NM_001142520 NM_001142521	84219	+	AK091965|GLYATL1|92292|glycine-N-acyltransferase-like 1##DQ084381|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220496|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_080661|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK055818|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC062456|FAM111B|374393|family with sequence similarity 111, member B##NM_001142703|FAM111B|374393|family with sequence similarity 111, member B##NM_001142704|FAM111B|374393|family with sequence similarity 111, member B##NM_198947|FAM111B|374393|family with sequence similarity 111, member B##BC005998|FAM111B|374393|family with sequence similarity 111, member B##AK304258|FAM111B|374393|family with sequence similarity 111, member B##AY457926|FAM111B|374393|family with sequence similarity 111, member B##AK303520|FAM111B|374393|family with sequence similarity 111, member B##AK092237|FAM111A|63901|family with sequence similarity 111, member A##NM_001142519|FAM111A|63901|family with sequence similarity 111, member A##NM_001142520|FAM111A|63901|family with sequence similarity 111, member A##NM_001142521|FAM111A|63901|family with sequence similarity 111, member A	0.10918	
chr1	226814297	226814405	reg1011603.p1	10.101	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-77734	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-77850	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-218548	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	112587	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	243929	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	313595	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.996213	CTCF.p2:-7:0.996
chr19	42795155	42795296	reg1011568.p1	10.101	+	TSC_hg19_v1_chr19_+_42788616 AF363689 DQ388764 NM_015125 AB527445	-6496	+	AK300627 TSC_hg19_v1_chr19_-_42759281 AK314278 NM_006494	-35920	-	AB463618 CU692500 DQ893568 DQ896817 TSC_hg19_v1_chr19_-_42759278 BC022231 U15655	-36011	-	BC063021 AK291528 NM_199285	11041	+	AB528706 CR407626 TSC_hg19_v1_chr19_-_42806760 D63391 BC007863 BC003016 NM_002573	11435	-	NM_001145939 TSC_hg19_v1_chr19_-_42806944 NM_001145940	11716	-	AF363689|CIC|23152|capicua homolog (Drosophila)##NM_015125|CIC|23152|capicua homolog (Drosophila)##AK300627|ERF|2077|Ets2 repressor factor##AK314278|ERF|2077|Ets2 repressor factor##NM_006494|ERF|2077|Ets2 repressor factor##DQ893568|ERF|2077|Ets2 repressor factor##DQ896817|ERF|2077|Ets2 repressor factor##BC022231|ERF|2077|Ets2 repressor factor##U15655|ERF|2077|Ets2 repressor factor##BC063021|PRR19|284338|proline rich 19##AK291528|PRR19|284338|proline rich 19##NM_199285|PRR19|284338|proline rich 19##CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	0.990037	CTCF.p2:22:0.990
chr6	50570017	50570146	reg1011868.p1	10.101	+	DQ012016 NM_001037498	-553718	-	DQ012014 DQ012015 NM_001037497 NM_001037728	-580411	-	DQ012017 NM_001037729	-632744	-	AY028376 NM_172238	111175	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	216454	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	1382314	-	DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##DQ012014|DEFB110|245913|defensin, beta 110 locus##DQ012015|DEFB110|245913|defensin, beta 110 locus##NM_001037497|DEFB110|245913|defensin, beta 110 locus##NM_001037728|DEFB110|245913|defensin, beta 110 locus##DQ012017|DEFB113|245927|defensin, beta 113##NM_001037729|DEFB113|245927|defensin, beta 113##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	0.211763	CTCF.p2:15:0.212
chr6	53844404	53844555	reg1012710.p1	10.101	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	-184548	+	TSC_hg19_v1_chr6_+_53659776 BC003193 NM_018214	-184720	+	TSC_hg19_v1_chr6_+_53659294 AK021896	-185179	+	NM_138569 BX647567 AK055530	39271	+	BC070278 NM_014464 AK312918 BC056235 AB022277 AF195116 AF195117 CU687080 CU691132 EU832329 EU832414	328796	+	AK055204 NM_001010872 BC101628 BC112275	867109	+	AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1##BC003193|LRRC1|55227|leucine rich repeat containing 1##NM_018214|LRRC1|55227|leucine rich repeat containing 1##AK021896|LRRC1|55227|leucine rich repeat containing 1##NM_138569|MLIP|90523|muscular LMNA-interacting protein##BX647567|MLIP|90523|muscular LMNA-interacting protein##AK055530|MLIP|90523|muscular LMNA-interacting protein##BC070278|TINAG|27283|tubulointerstitial nephritis antigen##NM_014464|TINAG|27283|tubulointerstitial nephritis antigen##AK312918|TINAG|27283|tubulointerstitial nephritis antigen##BC056235|TINAG|27283|tubulointerstitial nephritis antigen##AB022277|TINAG|27283|tubulointerstitial nephritis antigen##AF195116|TINAG|27283|tubulointerstitial nephritis antigen##AF195117|TINAG|27283|tubulointerstitial nephritis antigen##EU832329|TINAG|27283|tubulointerstitial nephritis antigen##EU832414|TINAG|27283|tubulointerstitial nephritis antigen##AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B	0.979559	CTCF.p2:-16:0.980
chr8	26519419	26519551	reg1013562.p1	10.101	+	NM_001244604 TSC_hg19_v1_chr8_+_26435921 AK299077	-83558	+	TSC_hg19_v1_chr8_+_26435604 U17279 AB370194 AB590733 BT006944 CU691152	-83805	+	TSC_hg19_v1_chr8_+_26435468 AK223557 BC056408 D78013 BC010880 AK291287	-83958	+	U02569 AY491775 AY491776 AY491777 AY491778 AY491779 AY491780 AY491781 D25235 D32201 D32202 NM_000680 NM_033302 NM_033303 NM_033304	203433	-	AK311558 TSC_hg19_v1_chr8_-_26724735	205249	-	TSC_hg19_v1_chr8_-_26724764 AK289548	205273	-	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2##AK299077|DPYSL2|1808|dihydropyrimidinase-like 2##U17279|DPYSL2|1808|dihydropyrimidinase-like 2##AB370194|DPYSL2|1808|dihydropyrimidinase-like 2##AK223557|DPYSL2|1808|dihydropyrimidinase-like 2##BC056408|DPYSL2|1808|dihydropyrimidinase-like 2##D78013|DPYSL2|1808|dihydropyrimidinase-like 2##AK291287|DPYSL2|1808|dihydropyrimidinase-like 2##U02569|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491775|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491776|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491777|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491778|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491780|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491781|ADRA1A|148|adrenergic, alpha-1A-, receptor##D25235|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32201|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32202|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_000680|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033302|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033303|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033304|ADRA1A|148|adrenergic, alpha-1A-, receptor##AK289548|ADRA1A|148|adrenergic, alpha-1A-, receptor	0.98341	CTCF.p2:27:0.983
chr1	47854576	47854689	reg1010914.p2	10.100	+	TSC_hg19_v1_chr1_+_47799646 AF259961	-54991	+	TSC_hg19_v1_chr1_+_47799615 BC017806 AF087865 AF112216 AF110643 AK223014 AK294294 AK298502 AF070416 AK025258 AK293238 AK312693 BC014961 AB528698 DQ892213 DQ895408 DQ895409	-55080	+	TSC_hg19_v1_chr1_+_47799474 NM_001136140 NM_016308	-55167	+	AF275722 NM_012186	27111	+	AF042832 NM_004474	47056	+	NM_001194986	607929	-	AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##BC017806|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF087865|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF112216|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF110643|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK223014|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK294294|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK298502|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF070416|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK025258|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK293238|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK312693|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##BC014961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##DQ892213|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##DQ895408|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##DQ895409|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##NM_001136140|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##NM_016308|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##NM_001194986|LOC388630|388630|UPF0632 protein A	0.155406	
chr19	3210823	3210918	reg1011911.p1	10.100	+	TSC_hg19_v1_chr19_+_3198814 BC008920	-12045	+	TSC_hg19_v1_chr19_+_3185971 AL136567 AB527192 AM393010 CR533566	-24802	+	AK172848 TSC_hg19_v1_chr19_+_3185938 AK314044 BC010064 BC019091 BC025926	-24926	+	BC028101 NM_021938 AB209067 NM_001172673 TSC_hg19_v1_chr19_+_3224705	13834	+	BC047522 DQ891648 DQ894837 TSC_hg19_v1_chr19_+_3224751 CU690430 AF329266	13873	+	TSC_hg19_v1_chr19_+_3359531 NM_001245005 NM_205843 X12492 AK304816 AK289885	148586	+	BC008920|NCLN|56926|nicalin##AL136567|NCLN|56926|nicalin##AM393010|NCLN|56926|nicalin##CR533566|NCLN|56926|nicalin##AK172848|NCLN|56926|nicalin##AK314044|NCLN|56926|nicalin##BC010064|NCLN|56926|nicalin##BC019091|NCLN|56926|nicalin##BC025926|NCLN|56926|nicalin##BC028101|CELF5|60680|CUGBP, Elav-like family member 5##NM_021938|CELF5|60680|CUGBP, Elav-like family member 5##AB209067|CELF5|60680|CUGBP, Elav-like family member 5##NM_001172673|CELF5|60680|CUGBP, Elav-like family member 5##BC047522|CELF5|60680|CUGBP, Elav-like family member 5##DQ891648|CELF5|60680|CUGBP, Elav-like family member 5##DQ894837|CELF5|60680|CUGBP, Elav-like family member 5##AF329266|CELF5|60680|CUGBP, Elav-like family member 5##NM_001245005|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_205843|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X12492|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK304816|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK289885|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)	0.12651	
chr4	172767530	172767639	reg1010285.p1	10.100	+	NM_001034845 BC047551 BC144036 BC144037 BC063015	-32940	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-1756170	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-1756386	-	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	1322368	+	BC043556 TSC_hg19_v1_chr4_-_174090314	1322726	-	BC040577 TSC_hg19_v1_chr4_-_174090813	1323223	-	NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.990974	CTCF.p2:3:0.991
chr18	44238375	44238483	reg1009677.p2	10.099	+	NM_144612	-1434	-	BC041860 AK302484 NM_001145472	-99169	-	AK057232 BC047720 NM_001145473 NM_001173129	-139389	-	TSC_hg19_v1_chr18_-_44337014 AK094273 NM_013305 AK056270	98632	-	AB527541 AF077953 AF077954 DQ896421 EU176432 TSC_hg19_v1_chr18_-_44497471 AK308143 BC111060 BC015190 AK294801 NM_004671 NM_173206	258984	-	TSC_hg19_v1_chr18_+_44497558 AK309134	259128	+	NM_144612|LOXHD1|125336|lipoxygenase homology domains 1##BC041860|LOXHD1|125336|lipoxygenase homology domains 1##AK302484|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145472|LOXHD1|125336|lipoxygenase homology domains 1##AK057232|LOXHD1|125336|lipoxygenase homology domains 1##BC047720|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145473|LOXHD1|125336|lipoxygenase homology domains 1##NM_001173129|LOXHD1|125336|lipoxygenase homology domains 1##AK094273|ST8SIA5|29906|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5##NM_013305|ST8SIA5|29906|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5##AK056270|ST8SIA5|29906|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5##AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2##AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2##DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2##EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2##AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2##BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2##BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2##AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2##NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2##NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2##AK309134|KATNAL2|83473|katanin p60 subunit A-like 2	0.993807	CTCF.p2:4:0.994
chr10	102774150	102774269	reg1010604.p1	10.098	+	BC058938 TSC_hg19_v1_chr10_+_102759622	-14563	+	AB058716 TSC_hg19_v1_chr10_+_102759264	-14961	+	TSC_hg19_v1_chr10_+_102758072 AK298208	-16103	+	TSC_hg19_v1_chr10_-_102790862 AK024422	16649	-	FJ617449 TSC_hg19_v1_chr10_-_102790906 AK026862 AK225136 NM_001195263 NM_024895	16688	-	TSC_hg19_v1_chr10_+_102790985 NM_030971	16780	+	BC058938|LZTS2|84445|leucine zipper, putative tumor suppressor 2##AB058716|LZTS2|84445|leucine zipper, putative tumor suppressor 2##AK298208|LZTS2|84445|leucine zipper, putative tumor suppressor 2##AK024422|PDZD7|79955|PDZ domain containing 7##FJ617449|PDZD7|79955|PDZ domain containing 7##AK026862|PDZD7|79955|PDZ domain containing 7##AK225136|PDZD7|79955|PDZ domain containing 7##NM_001195263|PDZD7|79955|PDZ domain containing 7##NM_024895|PDZD7|79955|PDZ domain containing 7##NM_030971|SFXN3|81855|sideroflexin 3	0.738015	CTCF.p2:7:0.738
chr2	219513323	219513442	reg1011539.p1	10.098	+	BC006355 AK023083 AK297808 TSC_hg19_v1_chr2_+_219472641	-40745	+	TSC_hg19_v1_chr2_+_219472618 AK057186 AK223203 AK299458	-40763	+	NM_032726 AY512961 TSC_hg19_v1_chr2_+_219472601	-40835	+	TSC_hg19_v1_chr2_-_219524332 BC038226 D87073 NM_001105537 BC033631 BC053849	10899	-	NM_001079866 NM_004328 TSC_hg19_v1_chr2_+_219524442 BX571752 AK289363 AF038195	11029	+	TSC_hg19_v1_chr2_+_219524452 BC000416 BC007500 AF026849 AK096210	11093	+	BC006355|PLCD4|84812|phospholipase C, delta 4##AK023083|PLCD4|84812|phospholipase C, delta 4##AK297808|PLCD4|84812|phospholipase C, delta 4##AK057186|PLCD4|84812|phospholipase C, delta 4##AK223203|PLCD4|84812|phospholipase C, delta 4##AK299458|PLCD4|84812|phospholipase C, delta 4##NM_032726|PLCD4|84812|phospholipase C, delta 4##AY512961|PLCD4|84812|phospholipase C, delta 4##BC038226|ZNF142|7701|zinc finger protein 142##D87073|ZNF142|7701|zinc finger protein 142##NM_001105537|ZNF142|7701|zinc finger protein 142##BC033631|ZNF142|7701|zinc finger protein 142##BC053849|ZNF142|7701|zinc finger protein 142##NM_001079866|BCS1L|617|BCS1-like (S. cerevisiae)##NM_004328|BCS1L|617|BCS1-like (S. cerevisiae)##BX571752|BCS1L|617|BCS1-like (S. cerevisiae)##AK289363|BCS1L|617|BCS1-like (S. cerevisiae)##AF038195|BCS1L|617|BCS1-like (S. cerevisiae)##BC000416|BCS1L|617|BCS1-like (S. cerevisiae)##BC007500|BCS1L|617|BCS1-like (S. cerevisiae)##AF026849|BCS1L|617|BCS1-like (S. cerevisiae)##AK096210|BCS1L|617|BCS1-like (S. cerevisiae)	0.957712	CTCF.p2:10:0.958
chr22	23881904	23882004	reg1009325.p1	10.098	+	TSC_hg19_v1_chr22_-_23744738 AK056130 AK092581 AX747609 AK092530 AX747585	-137211	-	TSC_hg19_v1_chr22_+_23540316 X14677 X14675	-341549	+	TSC_hg19_v1_chr22_+_23523013 X06418 EU216058 EU216059 EU216061 EU216062 EU216063 EU216064 EU216065 EU216067 EU216068 EU216069 EU216070 EU216072	-358905	+	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	40481	-	BC056888 AL080197 BC063390 AK310349 NM_016449	92542	-	AY101396 NM_153615	151093	+	AK056130|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092581|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092530|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##X06418|BCR|613|breakpoint cluster region##EU216058|BCR|613|breakpoint cluster region##EU216059|BCR|613|breakpoint cluster region##EU216061|BCR|613|breakpoint cluster region##EU216062|BCR|613|breakpoint cluster region##EU216063|BCR|613|breakpoint cluster region##EU216064|BCR|613|breakpoint cluster region##EU216067|BCR|613|breakpoint cluster region##EU216069|BCR|613|breakpoint cluster region##EU216070|BCR|613|breakpoint cluster region##DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43##AY101396|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4##NM_153615|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4	0.0	
chr2	97678081	97678195	reg1010575.p1	10.098	+	NM_001122646	-25838	-	BC038583 BC051379 NM_016490	-114289	-	AF151068 NM_001172667	-117262	-	TSC_hg19_v1_chr2_-_97760578 AK295056 BC064511 NM_199336	82453	-	AY358571 NM_001164315 BX647769 TSC_hg19_v1_chr2_+_97779310 AK304740 AK316541 AK307629 BC046186 BC128262 BC128517 CU692324	101215	+	CU687166 TSC_hg19_v1_chr2_-_98206176	528024	-	NM_001122646|FAM178B|51252|family with sequence similarity 178, member B##BC038583|FAM178B|51252|family with sequence similarity 178, member B##BC051379|FAM178B|51252|family with sequence similarity 178, member B##NM_016490|FAM178B|51252|family with sequence similarity 178, member B##AF151068|FAM178B|51252|family with sequence similarity 178, member B##NM_001172667|FAM178B|51252|family with sequence similarity 178, member B##AK295056|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##BC064511|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##NM_199336|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##AY358571|ANKRD36|375248|ankyrin repeat domain 36##NM_001164315|ANKRD36|375248|ankyrin repeat domain 36##BX647769|ANKRD36|375248|ankyrin repeat domain 36##AK304740|ANKRD36|375248|ankyrin repeat domain 36##AK316541|ANKRD36|375248|ankyrin repeat domain 36##AK307629|ANKRD36|375248|ankyrin repeat domain 36##BC046186|ANKRD36|375248|ankyrin repeat domain 36##BC128262|ANKRD36|375248|ankyrin repeat domain 36##BC128517|ANKRD36|375248|ankyrin repeat domain 36	0.980504	CTCF.p2:-6:0.981
chr3	51672027	51672142	reg1012065.p1	10.098	+	AK122683 NM_015106	-96489	+	TSC_hg19_v1_chr3_-_51534015 AB018343 BC110371 NM_001171904 NM_014703	-138078	-	BC022792 TSC_hg19_v1_chr3_-_51533986	-138135	-	NM_001129884 NM_001243727 NM_015926 TSC_hg19_v1_chr3_+_51705247 AK023997 AK222938 AK222949 BC008742 NM_001243725 NM_001243726 AY358972 BC001592	33182	+	NM_000839 NM_001130063 AK315816 AK289984 AK313056 BC041447	69008	+	NM_001143833	141118	-	AK122683|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)##NM_015106|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)##AB018343|VPRBP|9730|Vpr (HIV-1) binding protein##BC110371|VPRBP|9730|Vpr (HIV-1) binding protein##NM_001171904|VPRBP|9730|Vpr (HIV-1) binding protein##NM_014703|VPRBP|9730|Vpr (HIV-1) binding protein##BC022792|VPRBP|9730|Vpr (HIV-1) binding protein##NM_001129884|TEX264|51368|testis expressed 264##NM_001243727|TEX264|51368|testis expressed 264##NM_015926|TEX264|51368|testis expressed 264##AK023997|TEX264|51368|testis expressed 264##AK222938|TEX264|51368|testis expressed 264##AK222949|TEX264|51368|testis expressed 264##BC008742|TEX264|51368|testis expressed 264##NM_001243725|TEX264|51368|testis expressed 264##NM_001243726|TEX264|51368|testis expressed 264##AY358972|TEX264|51368|testis expressed 264##BC001592|TEX264|51368|testis expressed 264##NM_000839|GRM2|2912|glutamate receptor, metabotropic 2##NM_001130063|GRM2|2912|glutamate receptor, metabotropic 2##AK315816|GRM2|2912|glutamate receptor, metabotropic 2##AK289984|GRM2|2912|glutamate receptor, metabotropic 2##AK313056|GRM2|2912|glutamate receptor, metabotropic 2##BC041447|GRM2|2912|glutamate receptor, metabotropic 2##NM_001143833|IQCF6|440956|IQ motif containing F6	1.218679	CTCF.p2:-24:0.274	CTCF.p2:29:0.944
chr4	15459311	15459449	reg1011653.p2	10.098	+	NM_031911 AF329839	-29733	+	NM_001135171	-83206	+	BX647781 NM_001135170 AK314802 BC022187 BC024015	-117795	+	NM_001080522 NM_001164720 NM_020785 AK096047 AK309178 BX647334 BC061921 BC053865 BC070395 EU450799	12194	+	TSC_hg19_v1_chr4_+_15480833 AB037766 BC103710	21469	+	AF157323 AM392665 AM393475 CU688970 DQ892452 DQ895664 AF176700 AF199420 TSC_hg19_v1_chr4_-_15656935	197535	-	NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135171|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001080522|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_001164720|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_020785|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AK096047|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AK309178|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BX647334|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC061921|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC053865|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC070395|CC2D2A|57545|coiled-coil and C2 domain containing 2A##EU450799|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AF157323|FBXL5|26234|F-box and leucine-rich repeat protein 5##AM392665|FBXL5|26234|F-box and leucine-rich repeat protein 5##AM393475|FBXL5|26234|F-box and leucine-rich repeat protein 5##DQ892452|FBXL5|26234|F-box and leucine-rich repeat protein 5##DQ895664|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF176700|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF199420|FBXL5|26234|F-box and leucine-rich repeat protein 5	0.995883	CTCF.p2:4:0.996
chr8	105337764	105337897	reg1009689.p1	10.098	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	-506255	+	AK126939 NM_001100117	-824855	+	TSC_hg19_v1_chr8_+_104427659 AK001874	-910165	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	14222	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	141385	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	263345	-	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK001874|DCAF13|25879|DDB1 and CUL4 associated factor 13##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12	0.696944	CTCF.p2:2:0.697
chr13	35731409	35731526	reg1010918.p1	10.097	+	TSC_hg19_v1_chr13_+_35516429 NM_015678 AF467288	-215009	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	-1339183	+	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	-1339240	+	BC028170 AB593021 TSC_hg19_v1_chr13_-_36050827 AB593022 AK313185 AB073388 NM_005584	319329	-	AK294737 NM_001204197 TSC_hg19_v1_chr13_+_36050945 AK315939	319458	+	AK299059 AK311183 AK295777 TSC_hg19_v1_chr13_-_36429805 CR627093 AK308925 AK311434 AK311438 AK311195 NM_001195415 NM_001195416 NM_001195430	698430	-	NM_015678|NBEA|26960|neurobeachin##AF467288|NBEA|26960|neurobeachin##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK294737|NBEA|26960|neurobeachin##NM_001204197|NBEA|26960|neurobeachin##AK315939|NBEA|26960|neurobeachin##AK299059|DCLK1|9201|doublecortin-like kinase 1##AK311183|DCLK1|9201|doublecortin-like kinase 1##AK295777|DCLK1|9201|doublecortin-like kinase 1##CR627093|DCLK1|9201|doublecortin-like kinase 1##AK308925|DCLK1|9201|doublecortin-like kinase 1##AK311434|DCLK1|9201|doublecortin-like kinase 1##AK311438|DCLK1|9201|doublecortin-like kinase 1##AK311195|DCLK1|9201|doublecortin-like kinase 1##NM_001195415|DCLK1|9201|doublecortin-like kinase 1##NM_001195416|DCLK1|9201|doublecortin-like kinase 1##NM_001195430|DCLK1|9201|doublecortin-like kinase 1	0.998798	CTCF.p2:21:0.999
chr20	60462367	60462490	reg1014150.p1	10.097	+	NM_001252339 AK124724	-287604	+	AK308345 NM_001252338	-387952	+	TSC_hg19_v1_chr20_+_59827453 BC101651 BC112150 NM_001794 AK315192 L34059	-634923	+	U75308 NM_003185 Y11354 TSC_hg19_v1_chr20_-_60640882	178451	-	TSC_hg19_v1_chr20_+_60697530 BC057387 NM_144703 BC035702	235086	+	TSC_hg19_v1_chr20_+_60697578 CU691202	235216	+	NM_001252339|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK124724|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK308345|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252338|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC101651|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC112150|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001794|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK315192|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##L34059|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##U75308|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##NM_003185|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##Y11354|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##BC057387|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##NM_144703|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##BC035702|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)	0.995501	CTCF.p2:0:0.996
chr1	105570843	105570956	reg1007518.p2	10.096	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-1278397	+	NM_001008221 AK292341	-1278621	+	AK292341 NM_001008221	-1331828	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	2028466	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	2111843	+	AB023193 TSC_hg19_v1_chr1_+_107683657	2112705	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.017335	
chr7	55501019	55501139	reg1010512.p1	10.096	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	-67507	+	AK095857 NM_018697	-67939	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-414133	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	138961	-	TSC_hg19_v1_chr7_-_55640073 AB097004	139003	-	BC016650 AK314338 TSC_hg19_v1_chr7_-_55640107	139026	-	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AB097004|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##BC016650|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK314338|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	0.60457	CTCF.p2:-3:0.605
chr11	116095214	116095346	reg1013436.p1	10.095	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-720100	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-1006632	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1546032	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	548418	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	563435	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	563458	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.976266	CTCF.p2:8:0.976
chr3	42822427	42822574	reg1013113.p1	10.095	+	AK302859 BC036050 AK058196 NM_144719	-7761	-	NM_020707	-78182	-	AY176040 AY177390 NM_152393 AK056577 AK291294 AK300682 TSC_hg19_v1_chr3_+_42727028 BC110491	-95474	+	TSC_hg19_v1_chr3_-_42843217 BC061594	20763	-	TSC_hg19_v1_chr3_-_42845935 NM_001099668	23423	-	TSC_hg19_v1_chr3_-_42845983 AK225461 BC009583 BC009594 BC000601 AF145385 AF077034 BC070277 AK225571 AK311815 AL110233 NM_001099669 NM_014056	23486	-	AK302859|CCDC13|152206|coiled-coil domain containing 13##BC036050|CCDC13|152206|coiled-coil domain containing 13##AK058196|CCDC13|152206|coiled-coil domain containing 13##NM_144719|CCDC13|152206|coiled-coil domain containing 13##NM_020707|HHATL|57467|hedgehog acyltransferase-like##AY176040|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AY177390|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##NM_152393|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AK056577|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AK291294|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AK300682|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##BC110491|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##NM_001099668|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AK225461|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC009583|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC009594|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC000601|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AF145385|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AF077034|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC070277|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AK225571|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AK311815|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AL110233|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##NM_001099669|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##NM_014056|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A	0.986476	CTCF.p2:2:0.986
chr12	8332703	8332835	reg1010818.p1	10.094	+	NM_001004328	-7620	+	AF067800 NM_016184 NM_194447 NM_194448 NM_194450 AJ133532 AF328684 BC117439 BC117441 AF109146 BC074822 BC074874 AF200738 HQ258754 EU196761	-56402	+	TSC_hg19_v1_chr12_+_8234872 NM_015509 AK074880 AK074858 AK074923 AK303675 AK314424 BC110876 AL050272 AK290537 BC002888	-97918	+	TSC_hg19_v1_chr12_+_8332811 AK096301 BC048994 AK311411 BC034777	57	+	BC042608 AK001270 NM_018088	47434	-	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	275833	+	NM_001004328|ZNF705A|440077|zinc finger protein 705A##AF067800|CLEC4A|50856|C-type lectin domain family 4, member A##NM_016184|CLEC4A|50856|C-type lectin domain family 4, member A##NM_194447|CLEC4A|50856|C-type lectin domain family 4, member A##NM_194448|CLEC4A|50856|C-type lectin domain family 4, member A##NM_194450|CLEC4A|50856|C-type lectin domain family 4, member A##AJ133532|CLEC4A|50856|C-type lectin domain family 4, member A##AF328684|CLEC4A|50856|C-type lectin domain family 4, member A##BC117439|CLEC4A|50856|C-type lectin domain family 4, member A##BC117441|CLEC4A|50856|C-type lectin domain family 4, member A##AF109146|CLEC4A|50856|C-type lectin domain family 4, member A##BC074822|CLEC4A|50856|C-type lectin domain family 4, member A##BC074874|CLEC4A|50856|C-type lectin domain family 4, member A##AF200738|CLEC4A|50856|C-type lectin domain family 4, member A##HQ258754|CLEC4A|50856|C-type lectin domain family 4, member A##NM_015509|NECAP1|25977|NECAP endocytosis associated 1##AK074880|NECAP1|25977|NECAP endocytosis associated 1##AK074858|NECAP1|25977|NECAP endocytosis associated 1##AK074923|NECAP1|25977|NECAP endocytosis associated 1##AK303675|NECAP1|25977|NECAP endocytosis associated 1##AK314424|NECAP1|25977|NECAP endocytosis associated 1##BC110876|NECAP1|25977|NECAP endocytosis associated 1##AL050272|NECAP1|25977|NECAP endocytosis associated 1##AK290537|NECAP1|25977|NECAP endocytosis associated 1##BC002888|NECAP1|25977|NECAP endocytosis associated 1##AK096301|FAM66C|440078|family with sequence similarity 66, member C##BC048994|FAM66C|440078|family with sequence similarity 66, member C##BC034777|FAM66C|440078|family with sequence similarity 66, member C##BC042608|FAM90A1|55138|family with sequence similarity 90, member A1##AK001270|FAM90A1|55138|family with sequence similarity 90, member A1##NM_018088|FAM90A1|55138|family with sequence similarity 90, member A1##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A	0.5754	CTCF.p2:-15:0.517
chr10	99372320	99372452	reg1014409.p1	10.093	+	AM393165 AM393183 AM393504 AM393792 NM_001009997 BC037252	-22968	+	TSC_hg19_v1_chr10_+_99344421 AK289440 CU691258 CU692268 EU831607 EU831618 EU831694 EU831704	-27946	+	AK094791 TSC_hg19_v1_chr10_+_99344126 BC011916 NM_001134670 NM_138413 BC045550 BC057821 AK293733	-28281	+	AK289406 DQ338435 DQ338436 AL834132 BC022054 BC093023 TSC_hg19_v1_chr10_-_99393255 AK098791 AJ312050 NM_178832	20873	-	BC010230 BC040015 AJ431726 NM_001098831	21495	-	TSC_hg19_v1_chr10_+_99400444 AJ303098 NM_018425	28056	+	AM393165|C10orf62|414157|chromosome 10 open reading frame 62##AM393183|C10orf62|414157|chromosome 10 open reading frame 62##AM393504|C10orf62|414157|chromosome 10 open reading frame 62##AM393792|C10orf62|414157|chromosome 10 open reading frame 62##NM_001009997|C10orf62|414157|chromosome 10 open reading frame 62##BC037252|C10orf62|414157|chromosome 10 open reading frame 62##AK289440|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831607|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831618|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831694|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831704|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##AK094791|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC011916|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##NM_001134670|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##NM_138413|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC045550|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC057821|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##AK289406|MORN4|118812|MORN repeat containing 4##DQ338435|MORN4|118812|MORN repeat containing 4##DQ338436|MORN4|118812|MORN repeat containing 4##AL834132|MORN4|118812|MORN repeat containing 4##BC022054|MORN4|118812|MORN repeat containing 4##BC093023|MORN4|118812|MORN repeat containing 4##AK098791|MORN4|118812|MORN repeat containing 4##AJ312050|MORN4|118812|MORN repeat containing 4##NM_178832|MORN4|118812|MORN repeat containing 4##BC010230|MORN4|118812|MORN repeat containing 4##BC040015|MORN4|118812|MORN repeat containing 4##AJ431726|MORN4|118812|MORN repeat containing 4##NM_001098831|MORN4|118812|MORN repeat containing 4##AJ303098|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##NM_018425|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	0.800483	CTCF.p2:10:0.800
chr22	28276928	28277065	reg1011841.p1	10.093	+	TSC_hg19_v1_chr22_-_28197481 NM_002430 X82209	-79519	-	TSC_hg19_v1_chr22_+_27068725 AK026502	-1208256	+	TSC_hg19_v1_chr22_+_27053392 AB263414 AB263415 AB263416 AB263417 AK098833	-1223524	+	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	38178	-	TSC_hg19_v1_chr22_-_28315203 BC031427	38211	-	TSC_hg19_v1_chr22_-_28315245 BC018704 D30037 AK313064 CR456541 NM_012399	38268	-	NM_002430|MN1|4330|meningioma (disrupted in balanced translocation) 1##X82209|MN1|4330|meningioma (disrupted in balanced translocation) 1##AK026502|LOC100507637|100507637|uncharacterized LOC100507637##AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta##D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta##CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta	0.99868	CTCF.p2:-18:0.999
chrX	38186865	38186979	reg1010642.p1	10.093	+	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	-127	-	X97668 CU689206 AJ238395 U57629 TSC_hg19_v1_chrX_-_38186763 BC031624 AK223491 DQ980616	-227	-	TSC_hg19_v1_chrX_-_38080117 AB527644 CU676640 U61374 U78093 AK298802 AK289430 BC020684 AK293127 AK125542 NM_001170750 NM_001170751 NM_001170752 NM_006307	-106797	-	BC107153 BC107154 NM_000531 BC114496 AK292757 K02100 BC074745	24902	+	TSC_hg19_v1_chrX_+_38420794 NM_004615 AB062057 L10373 BC018036 AK293534 AK293178 AK293552 AK312343 D10653 CU676142 DQ892093 DQ895571 D29808 AB102665	233830	+	TSC_hg19_v1_chrX_+_38660678 NM_001098790 NM_001098791	473746	+	DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator##X97668|RPGR|6103|retinitis pigmentosa GTPase regulator##AJ238395|RPGR|6103|retinitis pigmentosa GTPase regulator##U57629|RPGR|6103|retinitis pigmentosa GTPase regulator##BC031624|RPGR|6103|retinitis pigmentosa GTPase regulator##AK223491|RPGR|6103|retinitis pigmentosa GTPase regulator##DQ980616|RPGR|6103|retinitis pigmentosa GTPase regulator##U61374|SRPX|8406|sushi-repeat containing protein, X-linked##U78093|SRPX|8406|sushi-repeat containing protein, X-linked##AK298802|SRPX|8406|sushi-repeat containing protein, X-linked##AK289430|SRPX|8406|sushi-repeat containing protein, X-linked##BC020684|SRPX|8406|sushi-repeat containing protein, X-linked##AK293127|SRPX|8406|sushi-repeat containing protein, X-linked##AK125542|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked##NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked##BC107153|OTC|5009|ornithine carbamoyltransferase##BC107154|OTC|5009|ornithine carbamoyltransferase##NM_000531|OTC|5009|ornithine carbamoyltransferase##BC114496|OTC|5009|ornithine carbamoyltransferase##AK292757|OTC|5009|ornithine carbamoyltransferase##K02100|OTC|5009|ornithine carbamoyltransferase##BC074745|OTC|5009|ornithine carbamoyltransferase##NM_004615|TSPAN7|7102|tetraspanin 7##AB062057|TSPAN7|7102|tetraspanin 7##L10373|TSPAN7|7102|tetraspanin 7##BC018036|TSPAN7|7102|tetraspanin 7##AK293534|TSPAN7|7102|tetraspanin 7##AK293178|TSPAN7|7102|tetraspanin 7##AK293552|TSPAN7|7102|tetraspanin 7##AK312343|TSPAN7|7102|tetraspanin 7##D10653|TSPAN7|7102|tetraspanin 7##DQ892093|TSPAN7|7102|tetraspanin 7##DQ895571|TSPAN7|7102|tetraspanin 7##D29808|TSPAN7|7102|tetraspanin 7##AB102665|TSPAN7|7102|tetraspanin 7##NM_001098790|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_001098791|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))	0.650567	CTCF.p2:3:0.651
chr1	156595752	156595851	reg1010870.p1	10.092	+	AB049054 NM_021817 AK294131 AK310758 AK308805 AK090712 AK308980 AK293797 BC029864	-6615	+	AB528795 BC032436 TSC_hg19_v1_chr1_-_156571275 BC040147 AK125763 BC056904 AK000256 AK293026 AK301232 NM_015590 NM_182679	-24544	-	TSC_hg19_v1_chr1_+_156561594 AK316083	-34199	+	TSC_hg19_v1_chr1_+_156611723 AY358372 NM_021948 NM_198427	15928	+	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	16153	+	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	51344	-	AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC032436|GPATCH4|54865|G patch domain containing 4##BC040147|GPATCH4|54865|G patch domain containing 4##AK125763|GPATCH4|54865|G patch domain containing 4##BC056904|GPATCH4|54865|G patch domain containing 4##AK000256|GPATCH4|54865|G patch domain containing 4##AK293026|GPATCH4|54865|G patch domain containing 4##AK301232|GPATCH4|54865|G patch domain containing 4##NM_015590|GPATCH4|54865|G patch domain containing 4##NM_182679|GPATCH4|54865|G patch domain containing 4##AY358372|BCAN|63827|brevican##NM_021948|BCAN|63827|brevican##NM_198427|BCAN|63827|brevican##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin	0.051023	
chr14	64770287	64770431	reg1011766.p1	10.091	+	AF051427 AF051428 AF060555 NM_001040275 NM_001437	-9257	-	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	-20696	-	NM_182910	-87688	+	NM_001040276 BX247957 TSC_hg19_v1_chr14_-_64805347	34999	-	AK302747 NM_005956	84394	+	TSC_hg19_v1_chr14_+_64855070 AK095514 AK312361 BC050420 AK309266 BC009806 J04031 AB384767 DQ893634 DQ896853	84737	+	AF051427|ESR2|2100|estrogen receptor 2 (ER beta)##AF051428|ESR2|2100|estrogen receptor 2 (ER beta)##AF060555|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001040275|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001437|ESR2|2100|estrogen receptor 2 (ER beta)##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_001040276|ESR2|2100|estrogen receptor 2 (ER beta)##BX247957|ESR2|2100|estrogen receptor 2 (ER beta)##AK302747|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_005956|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK312361|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC050420|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK309266|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC009806|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##J04031|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ893634|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ896853|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase	0.899979	CTCF.p2:19:0.900
chr16	56634451	56634554	reg1009996.p2	10.091	+	NM_005954	-11236	+	BC113442 BC113444 NM_032935	-35542	+	TSC_hg19_v1_chr16_-_56553962 AB208905 NM_031885	-80517	-	NM_005953 TSC_hg19_v1_chr16_+_56642498 BC007034 BC062435 D28442 BC070289 V00594 AY077636 M26637 AB463881 BT007315 S52379 X97260	8020	+	NM_175617 TSC_hg19_v1_chr16_+_56659593	25086	+	BC131609 BC062734 TSC_hg19_v1_chr16_+_56659697 AF495759 AF348996 S68949	25219	+	NM_005954|MT3|4504|metallothionein 3##BC113442|MT4|84560|metallothionein 4##BC113444|MT4|84560|metallothionein 4##NM_032935|MT4|84560|metallothionein 4##AB208905|BBS2|583|Bardet-Biedl syndrome 2##NM_031885|BBS2|583|Bardet-Biedl syndrome 2##NM_005953|MT2A|4502|metallothionein 2A##BC007034|MT2A|4502|metallothionein 2A##D28442|MT2A|4502|metallothionein 2A##BC070289|MT2A|4502|metallothionein 2A##V00594|MT2A|4502|metallothionein 2A##M26637|MT2A|4502|metallothionein 2A##BT007315|MT2A|4502|metallothionein 2A##S52379|MT2A|4502|metallothionein 2A##X97260|MT2A|4502|metallothionein 2A##NM_175617|MT1E|4493|metallothionein 1E##BC131609|MT1E|4493|metallothionein 1E##BC062734|MT1E|4493|metallothionein 1E##AF495759|MT1E|4493|metallothionein 1E##S68949|MT1E|4493|metallothionein 1E	0.981422	CTCF.p2:1:0.981
chr1	44513457	44513582	reg1011501.p1	10.090	+	TSC_hg19_v1_chr1_-_44497141 AK315933 NM_001024845	-16380	-	TSC_hg19_v1_chr1_-_44497033 AK304057 AK298611	-16477	-	NM_006934 NM_201649 S70609 S70612 AK315233	-30516	-	BC049844 NM_173484 AK097479 BC035408 CU690622	71030	+	TSC_hg19_v1_chr1_+_44679145 NM_001034023 NM_001034024 NM_019100 AL136657 AK300372 BC002855 AK300442 AK293598 AK021605 AK289366 AK298793 AB037846 AL137200 BC008053 AK300217	165624	+	AB528814 TSC_hg19_v1_chr1_-_44820904 AF007157	307289	-	AK315933|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_001024845|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK304057|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK298611|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##BC049844|KLF17|128209|Kruppel-like factor 17##NM_173484|KLF17|128209|Kruppel-like factor 17##AK097479|KLF17|128209|Kruppel-like factor 17##BC035408|KLF17|128209|Kruppel-like factor 17##NM_001034023|DMAP1|55929|DNA methyltransferase 1 associated protein 1##NM_001034024|DMAP1|55929|DNA methyltransferase 1 associated protein 1##NM_019100|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AL136657|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300372|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC002855|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300442|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK293598|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK021605|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK289366|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK298793|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AB037846|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AL137200|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC008053|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300217|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AF007157|ERI3|79033|ERI1 exoribonuclease family member 3	0.923538	CTCF.p2:21:0.924
chr3	129661198	129661309	reg1011051.p1	10.090	+	TSC_hg19_v1_chr3_+_129612705 AK127796	-48535	+	TSC_hg19_v1_chr3_-_129612445 NM_001128224	-48835	-	AK291448 BC039859 NM_001017395	-61943	-	NM_007117 TSC_hg19_v1_chr3_+_129693145	31876	+	NM_001136152 BC127755	139485	+	TSC_hg19_v1_chr3_-_129830276 BC083497	169042	-	AK127796|LOC100507032|100507032|uncharacterized LOC100507032##NM_001128224|TMCC1|23023|transmembrane and coiled-coil domain family 1##AK291448|TMCC1|23023|transmembrane and coiled-coil domain family 1##BC039859|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001017395|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_007117|TRH|7200|thyrotropin-releasing hormone##NM_001136152|ALG1L2|644974|asparagine-linked glycosylation 1-like 2	0.140263	
chr3	55756255	55756366	reg1010119.p2	10.090	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-234692	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-234978	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-240902	-	BC111550 BC112391 AB002376 NM_015576	746067	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	834892	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	834936	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.0	
chr7	86099139	86099255	reg1010926.p2	10.090	+	AK309116 TSC_hg19_v1_chr7_-_84816296	-1282962	-	NM_152754	-1347951	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-2274875	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	174028	+	AK291406 TSC_hg19_v1_chr7_+_86273870	174674	+	AK294701 TSC_hg19_v1_chr7_+_86274004 BC022496	174794	+	AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3##AK291406|GRM3|2913|glutamate receptor, metabotropic 3##AK294701|GRM3|2913|glutamate receptor, metabotropic 3##BC022496|GRM3|2913|glutamate receptor, metabotropic 3	0.9974	CTCF.p2:-3:0.997
chr3	183945293	183945395	reg1010272.p1	10.089	+	TSC_hg19_v1_chr3_+_183903978 AK299433 AK299256 BC009253 AK027288 BC035652 BC051754 BC051884 AK290106 CU679275 CU690830	-41363	+	NM_018358 AK002060 AK092415 TSC_hg19_v1_chr3_+_183903963 AK097073	-41430	+	U36188 TSC_hg19_v1_chr3_+_183894817 AB385280 CU678848 CU680684 DQ892876 DQ895915 BT007308	-50558	+	BC136609 NM_138345	2922	+	TSC_hg19_v1_chr3_-_183966735 BC004313 BC021062 CU678238 DQ893160 DQ896456 BC002839 AK297701 AK299575	21375	-	TSC_hg19_v1_chr3_-_183966751 NM_005787 Y09022	21418	-	AK299433|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##AK299256|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##BC009253|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##AK027288|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##BC035652|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##BC051754|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##BC051884|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##AK290106|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##NM_018358|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##AK002060|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##AK092415|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##AK097073|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##U36188|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit##DQ892876|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit##DQ895915|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit##BT007308|AP2M1|1173|adaptor-related protein complex 2, mu 1 subunit##BC136609|VWA5B2|90113|von Willebrand factor A domain containing 5B2##NM_138345|VWA5B2|90113|von Willebrand factor A domain containing 5B2##BC004313|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##BC021062|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##DQ893160|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##DQ896456|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##BC002839|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##AK297701|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##AK299575|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##NM_005787|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##Y09022|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)	0.404045	CTCF.p2:15:0.404
chr7	156609774	156609928	reg1013808.p1	10.089	+	TSC_hg19_v1_chr7_-_156468370 CU688401	-141429	-	NM_001184997 AF325690	-174156	+	NM_030936 TSC_hg19_v1_chr7_+_156433487 AK314067 NM_001184996 AL136874 BC028120 AK307316	-176386	+	TSC_hg19_v1_chr7_-_156685868 AL834394 AB463099 AM392621 AM393143 AM393254 AM393828 CU676016 AF402318 BC017663 BC063649 AF107454 AK021727 AK291037 AK299753	75896	-	TSC_hg19_v1_chr7_-_156685878 NM_022458	76065	-	TSC_hg19_v1_chr7_+_156742419 AY576779 NM_138400	132564	+	NM_001184997|RNF32|140545|ring finger protein 32##AF325690|RNF32|140545|ring finger protein 32##NM_030936|RNF32|140545|ring finger protein 32##AK314067|RNF32|140545|ring finger protein 32##NM_001184996|RNF32|140545|ring finger protein 32##AL136874|RNF32|140545|ring finger protein 32##BC028120|RNF32|140545|ring finger protein 32##AK307316|RNF32|140545|ring finger protein 32##AL834394|LMBR1|64327|limb region 1 homolog (mouse)##AM392621|LMBR1|64327|limb region 1 homolog (mouse)##AM393143|LMBR1|64327|limb region 1 homolog (mouse)##AM393254|LMBR1|64327|limb region 1 homolog (mouse)##AM393828|LMBR1|64327|limb region 1 homolog (mouse)##AF402318|LMBR1|64327|limb region 1 homolog (mouse)##BC017663|LMBR1|64327|limb region 1 homolog (mouse)##BC063649|LMBR1|64327|limb region 1 homolog (mouse)##AK021727|LMBR1|64327|limb region 1 homolog (mouse)##AK291037|LMBR1|64327|limb region 1 homolog (mouse)##AK299753|LMBR1|64327|limb region 1 homolog (mouse)##NM_022458|LMBR1|64327|limb region 1 homolog (mouse)##AY576779|NOM1|64434|nucleolar protein with MIF4G domain 1##NM_138400|NOM1|64434|nucleolar protein with MIF4G domain 1	0.946354	CTCF.p2:8:0.946
chr13	78052649	78052784	reg1010859.p2	10.088	+	NM_015057 TSC_hg19_v1_chr13_-_77901230	-151513	-	TSC_hg19_v1_chr13_-_77601303 AK314442 NM_012158	-451385	-	TSC_hg19_v1_chr13_-_77601295 AL833187 BC063796 BC072448	-451434	-	NM_001160706 NM_003843 NM_144777 BC020726 AF045941 AK025320 AK222720 AK301659	57135	+	TSC_hg19_v1_chr13_+_78271822 NM_001242868	219188	+	AK294201 NM_001040153	220299	+	NM_015057|MYCBP2|23077|MYC binding protein 2##AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3##AL833187|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC063796|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC072448|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_001160706|SCEL|8796|sciellin##NM_003843|SCEL|8796|sciellin##NM_144777|SCEL|8796|sciellin##BC020726|SCEL|8796|sciellin##AF045941|SCEL|8796|sciellin##AK025320|SCEL|8796|sciellin##AK222720|SCEL|8796|sciellin##AK301659|SCEL|8796|sciellin##NM_001242868|SLAIN1|122060|SLAIN motif family, member 1##AK294201|SLAIN1|122060|SLAIN motif family, member 1##NM_001040153|SLAIN1|122060|SLAIN motif family, member 1	0.999444	CTCF.p2:11:0.999
chr15	23152841	23152985	reg1014014.p1	10.088	+	TSC_hg19_v1_chr15_-_23115247 BC044583	-37665	-	BC025678 NM_001142275	-66071	-	AK057846 BC103705 AK314073 AB590048 TSC_hg19_v1_chr15_-_23086444 NM_144599	-66539	-	DQ309040 BC048987 TSC_hg19_v1_chr15_-_23208467	55498	-	TSC_hg19_v1_chr15_-_23378205 AK308640	225277	-	TSC_hg19_v1_chr15_-_23378229 AF041081 AF041080	225331	-	BC044583|LOC283683|283683|uncharacterized LOC283683##BC025678|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##NM_001142275|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##AK057846|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##BC103705|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##AK314073|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##NM_144599|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##DQ309040|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC048987|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##AK308640|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041080|HERC2P2|400322|hect domain and RLD 2 pseudogene 2	0.825676	CTCF.p2:0:0.826
chr9	22008713	22008815	reg1011962.p1	10.088	+	TSC_hg19_v1_chr9_-_21994420 AB464504 S78535 NM_058195 U38945	-14313	-	BC015960 BC021998 TSC_hg19_v1_chr9_-_21994399	-14375	-	BT007020 TSC_hg19_v1_chr9_-_21994352 U26727	-14415	-	AF004819 U17075 L36844 BC014469 TSC_hg19_v1_chr9_-_22009305 NM_004936 NM_078487	526	-	TSC_hg19_v1_chr9_+_22113543 BC038540	104845	+	TSC_hg19_v1_chr9_+_22446846 AK096011 NM_022160 BC130435 BC130437	438073	+	S78535|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_058195|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##U38945|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##BC015960|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##BC021998|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##BT007020|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##U26727|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##AF004819|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##U17075|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##L36844|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##BC014469|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##NM_004936|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##NM_078487|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##BC038540|CDKN2B-AS|100048912|CDKN2B antisense RNA (non-protein coding)##AK096011|DMRTA1|63951|DMRT-like family A1##NM_022160|DMRTA1|63951|DMRT-like family A1##BC130435|DMRTA1|63951|DMRT-like family A1##BC130437|DMRTA1|63951|DMRT-like family A1	0.967334	CTCF.p2:3:0.967
chr2	4402321	4402440	reg1013005.p1	10.086	+	AK302299 NM_018436 BC029652	-696583	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-759811	+	X74803 TSC_hg19_v1_chr2_+_3627765	-774635	+	U23752 AB028641 NM_003108 BC025789 AB464713	1430435	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	2603520	-	TSC_hg19_v1_chr2_-_7006650 AK308509	2604323	-	AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##X74803|RPS7|6201|ribosomal protein S7##U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	0.999637	CTCF.p2:1:1.000
chr11	79111922	79112042	reg1012418.p1	10.085	+	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-826087	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-826190	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	-983106	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	39742	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	3332916	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	3499535	-	AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_080491|GAB2|9846|GRB2-associated binding protein 2##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)	0.335501	CTCF.p2:-14:0.220
chr6	11700513	11700601	reg1009781.p1	10.085	+	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-162059	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-318017	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-467647	-	NM_001143948 NM_032744	78722	-	NM_002114	312166	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	590036	+	NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.990268	CTCF.p2:13:0.990
chr12	107235630	107235736	reg1010304.p2	10.084	+	TSC_hg19_v1_chr12_+_107168357 NM_018157 BC132689 BC144056 BC034220 AK001482 AY221116	-67221	+	BC028582 NM_032491 AF332192 AK315698 BC030644 CU688514 CU688962 DQ890831 DQ893986	-157150	+	NM_001206691 AB095365 AK302837 AB044245	-240752	+	TSC_hg19_v1_chr12_+_107349591 NM_152261	113914	+	AK024021 TSC_hg19_v1_chr12_+_107349684 AK001731 BC020522 AK022770	114025	+	TSC_hg19_v1_chr12_-_107380925 BC036066 BC068468 AK222558 AY008301 BC050361 BC025984 AK024124 NM_001033050 NM_025198	145215	-	NM_018157|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC132689|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC144056|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC034220|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AK001482|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AY221116|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC028582|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_032491|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AF332192|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK315698|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##BC030644|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ890831|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ893986|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_001206691|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095365|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK302837|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB044245|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_152261|C12orf23|90488|chromosome 12 open reading frame 23##AK024021|C12orf23|90488|chromosome 12 open reading frame 23##AK001731|C12orf23|90488|chromosome 12 open reading frame 23##BC020522|C12orf23|90488|chromosome 12 open reading frame 23##AK022770|C12orf23|90488|chromosome 12 open reading frame 23##BC036066|MTERFD3|80298|MTERF domain containing 3##BC068468|MTERFD3|80298|MTERF domain containing 3##AK222558|MTERFD3|80298|MTERF domain containing 3##AY008301|MTERFD3|80298|MTERF domain containing 3##BC050361|MTERFD3|80298|MTERF domain containing 3##BC025984|MTERFD3|80298|MTERF domain containing 3##AK024124|MTERFD3|80298|MTERF domain containing 3##NM_001033050|MTERFD3|80298|MTERF domain containing 3##NM_025198|MTERFD3|80298|MTERF domain containing 3	0.898102	CTCF.p2:2:0.898
chr12	31424935	31425055	reg1011726.p1	10.084	+	BC047317 BC050522 X99583 AK303139 TSC_hg19_v1_chr12_+_31226840 U33833 U75967 BC001591	-198122	+	TSC_hg19_v1_chr12_+_31226805 U75968 BC011264	-198187	+	TSC_hg19_v1_chr12_+_31226789 BC148224 BC111733 NM_004399 NM_030653 NM_152438 AK297607 BC050069	-198217	+	TSC_hg19_v1_chr12_-_31477084 AK294457	52092	-	BC071966 TSC_hg19_v1_chr12_-_31479052 BC004462 AK027736 AF087885 AK026932 AL157432	54063	-	TSC_hg19_v1_chr12_-_31479085 AF212220	54106	-	BC047317|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050522|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##X99583|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK303139|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U33833|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75967|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC001591|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75968|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC011264|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC148224|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_004399|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_030653|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_152438|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK297607|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050069|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK294457|FAM60A|58516|family with sequence similarity 60, member A##BC071966|FAM60A|58516|family with sequence similarity 60, member A##BC004462|FAM60A|58516|family with sequence similarity 60, member A##AF087885|FAM60A|58516|family with sequence similarity 60, member A##AK026932|FAM60A|58516|family with sequence similarity 60, member A##AL157432|FAM60A|58516|family with sequence similarity 60, member A##AF212220|FAM60A|58516|family with sequence similarity 60, member A	0.996293	CTCF.p2:8:0.996
chr12	7959586	7959714	reg1012726.p1	10.084	+	AK290896 TSC_hg19_v1_chr12_+_7942025 BC069807 BC098275 BC099704 EU446847 AY230262 AY578089	-17533	+	AB093576 AK022643 NM_024865 TSC_hg19_v1_chr12_+_7942016	-17645	+	AY151139 NM_001145465	-41839	+	AK126026 AK122783 TSC_hg19_v1_chr12_-_8025469 AK302881 AF481878 BC060766 AF481879 NM_153449	65816	-	AK299037 AK316238 TSC_hg19_v1_chr12_-_8043786	84118	-	CR457413 CU691674 DQ891118 DQ894297 DQ894299 AB209607 BC039196 AK304509 AK298673 AK312386 M20681 TSC_hg19_v1_chr12_-_8088888 NM_006931	129116	-	AK290896|NANOG|79923|Nanog homeobox##BC069807|NANOG|79923|Nanog homeobox##BC098275|NANOG|79923|Nanog homeobox##BC099704|NANOG|79923|Nanog homeobox##EU446847|NANOG|79923|Nanog homeobox##AY230262|NANOG|79923|Nanog homeobox##AY578089|NANOG|79923|Nanog homeobox##AB093576|NANOG|79923|Nanog homeobox##AK022643|NANOG|79923|Nanog homeobox##NM_024865|NANOG|79923|Nanog homeobox##AY151139|NANOGNB|360030|NANOG neighbor homeobox##NM_001145465|NANOGNB|360030|NANOG neighbor homeobox##AK126026|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK122783|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK302881|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AF481878|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##BC060766|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AF481879|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##NM_153449|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##CR457413|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ891118|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894297|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894299|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AB209607|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##BC039196|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK304509|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK298673|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK312386|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##M20681|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##NM_006931|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3	0.80334	CTCF.p2:1:0.803
chr16	28560732	28560863	reg1012837.p1	10.084	+	TSC_hg19_v1_chr16_-_28550361 AF069073 NM_001042483 NM_012385	-10388	-	AB463938 BT006896 CR542144 TSC_hg19_v1_chr16_-_28550296 BC002434 AK312135 AF135266	-10525	-	AY099296 CU687548 BC062422 NM_145659	-42655	-	TSC_hg19_v1_chr16_+_28565245 NM_138414 BC011981	4443	+	TSC_hg19_v1_chr16_+_28565292 AK057008	4492	+	BC052280 NM_177528	46950	-	AF069073|NUPR1|26471|nuclear protein, transcriptional regulator, 1##NM_001042483|NUPR1|26471|nuclear protein, transcriptional regulator, 1##NM_012385|NUPR1|26471|nuclear protein, transcriptional regulator, 1##BT006896|NUPR1|26471|nuclear protein, transcriptional regulator, 1##CR542144|NUPR1|26471|nuclear protein, transcriptional regulator, 1##BC002434|NUPR1|26471|nuclear protein, transcriptional regulator, 1##AK312135|NUPR1|26471|nuclear protein, transcriptional regulator, 1##AF135266|NUPR1|26471|nuclear protein, transcriptional regulator, 1##AY099296|IL27|246778|interleukin 27##BC062422|IL27|246778|interleukin 27##NM_145659|IL27|246778|interleukin 27##NM_138414|CCDC101|112869|coiled-coil domain containing 101##BC011981|CCDC101|112869|coiled-coil domain containing 101##AK057008|CCDC101|112869|coiled-coil domain containing 101##BC052280|SULT1A2|6799|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2##NM_177528|SULT1A2|6799|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 2	0.938302	CTCF.p2:15:0.938
chr4	48129908	48130047	reg1010996.p1	10.083	+	TSC_hg19_v1_chr4_+_48018788 BC067881 CR749484 NM_207330 AK095299	-111174	+	X64802 TSC_hg19_v1_chr4_-_48018662	-111340	-	AK292021 NM_000087	-115017	-	BC017829 L27071 NM_003328	6281	-	BC101711 BC101713 BC143487 NM_003215 TSC_hg19_v1_chr4_-_48271858	141858	-	BC040993 TSC_hg19_v1_chr4_+_48343485 AK291006	213434	+	BC067881|NIPAL1|152519|NIPA-like domain containing 1##CR749484|NIPAL1|152519|NIPA-like domain containing 1##NM_207330|NIPAL1|152519|NIPA-like domain containing 1##AK095299|NIPAL1|152519|NIPA-like domain containing 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1##AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1##BC017829|TXK|7294|TXK tyrosine kinase##L27071|TXK|7294|TXK tyrosine kinase##NM_003328|TXK|7294|TXK tyrosine kinase##BC101711|TEC|7006|tec protein tyrosine kinase##BC101713|TEC|7006|tec protein tyrosine kinase##BC143487|TEC|7006|tec protein tyrosine kinase##NM_003215|TEC|7006|tec protein tyrosine kinase##BC040993|SLAIN2|57606|SLAIN motif family, member 2##AK291006|SLAIN2|57606|SLAIN motif family, member 2	0.999756	CTCF.p2:-7:1.000
chr5	1479825	1479962	reg1011043.p1	10.083	+	S46955 EF174603 M95167 NM_001044	-34367	-	AB045223 DQ892147 DQ895343 AK027306 BC025305 NM_030782 TSC_hg19_v1_chr5_-_1345095	-134871	-	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	-184802	-	CU676500 BC020166 AK090444 TSC_hg19_v1_chr5_-_1494996	15041	-	TSC_hg19_v1_chr5_-_1523908 AB244719 AB463849	44041	-	TSC_hg19_v1_chr5_-_1524086 NM_024830	44169	-	S46955|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##EF174603|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##M95167|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##NM_001044|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##AB045223|CLPTM1L|81037|CLPTM1-like##DQ892147|CLPTM1L|81037|CLPTM1-like##DQ895343|CLPTM1L|81037|CLPTM1-like##AK027306|CLPTM1L|81037|CLPTM1-like##BC025305|CLPTM1L|81037|CLPTM1-like##NM_030782|CLPTM1L|81037|CLPTM1-like##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase##BC020166|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AK090444|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AB244719|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##NM_024830|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1	0.995485	CTCF.p2:-4:0.995
chr6_dbb_hap3	4234031	4234157	reg1013764.p1	10.082	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.003703	CTCF.p2:13:0.960
chr7	119912351	119912485	reg1010483.p1	10.082	+	NM_019644 AK302407	-2047684	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-2088247	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-2398875	-	AK307139 AB028967 NM_012281	1286	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	585602	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	585742	-	NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12	0.660717	CTCF.p2:2:0.661
chr8	26428887	26429011	reg1010551.p1	10.082	+	TSC_hg19_v1_chr8_+_26371546 AK092377 NM_001197293 AB370195	-57321	+	BC047515 TSC_hg19_v1_chr8_-_26371389 BC036489 AK055325 NM_007257	-57515	-	NM_004331 TSC_hg19_v1_chr8_+_26240583 AF452712 AK300286 AL132665 BC009603 AF067396 AF079221 AF060922 AK307195 AK300727 AF536326 AB004788 AK290213 BC001559 AB527613 BT019500 BT019501 CR456701 EU831983 EU832076	-188365	+	NM_001386 TSC_hg19_v1_chr8_+_26435441 BX647115 BC067109	6452	+	TSC_hg19_v1_chr8_+_26435468 AK223557 BC056408 D78013 BC010880 AK291287	6578	+	TSC_hg19_v1_chr8_+_26435604 U17279 AB370194 AB590733 BT006944 CU691152	6731	+	AK092377|DPYSL2|1808|dihydropyrimidinase-like 2##NM_001197293|DPYSL2|1808|dihydropyrimidinase-like 2##AB370195|DPYSL2|1808|dihydropyrimidinase-like 2##BC047515|PNMA2|10687|paraneoplastic antigen MA2##BC036489|PNMA2|10687|paraneoplastic antigen MA2##AK055325|PNMA2|10687|paraneoplastic antigen MA2##NM_007257|PNMA2|10687|paraneoplastic antigen MA2##NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##NM_001386|DPYSL2|1808|dihydropyrimidinase-like 2##BX647115|DPYSL2|1808|dihydropyrimidinase-like 2##BC067109|DPYSL2|1808|dihydropyrimidinase-like 2##AK223557|DPYSL2|1808|dihydropyrimidinase-like 2##BC056408|DPYSL2|1808|dihydropyrimidinase-like 2##D78013|DPYSL2|1808|dihydropyrimidinase-like 2##AK291287|DPYSL2|1808|dihydropyrimidinase-like 2##U17279|DPYSL2|1808|dihydropyrimidinase-like 2##AB370194|DPYSL2|1808|dihydropyrimidinase-like 2	0.999031	CTCF.p2:-14:0.999
chr1	110523386	110523522	reg1011705.p1	10.081	+	BC021117 TSC_hg19_v1_chr1_+_110453470 AK291660 M37435 M27087 U22386 AB527768 M64592	-69904	+	NM_000757 NM_172210 NM_172212	-70222	+	AY074930 TSC_hg19_v1_chr1_-_110306546 AK307932 AK310979 AK308196 AK025175 AK225235 BC012926 AK292198 AK290261 NM_024526 NM_133181 NM_139053	-216870	-	AF315687 TSC_hg19_v1_chr1_+_110527316	3857	+	TSC_hg19_v1_chr1_+_110527386 BC111563 NM_001242673 NM_006621 BC065254	3907	+	BC010681 TSC_hg19_v1_chr1_+_110527405	3948	+	BC021117|CSF1|1435|colony stimulating factor 1 (macrophage)##AK291660|CSF1|1435|colony stimulating factor 1 (macrophage)##M37435|CSF1|1435|colony stimulating factor 1 (macrophage)##M27087|CSF1|1435|colony stimulating factor 1 (macrophage)##U22386|CSF1|1435|colony stimulating factor 1 (macrophage)##M64592|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_000757|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172210|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172212|CSF1|1435|colony stimulating factor 1 (macrophage)##AY074930|EPS8L3|79574|EPS8-like 3##AK307932|EPS8L3|79574|EPS8-like 3##AK310979|EPS8L3|79574|EPS8-like 3##AK308196|EPS8L3|79574|EPS8-like 3##AK025175|EPS8L3|79574|EPS8-like 3##AK225235|EPS8L3|79574|EPS8-like 3##BC012926|EPS8L3|79574|EPS8-like 3##AK292198|EPS8L3|79574|EPS8-like 3##AK290261|EPS8L3|79574|EPS8-like 3##NM_024526|EPS8L3|79574|EPS8-like 3##NM_133181|EPS8L3|79574|EPS8-like 3##NM_139053|EPS8L3|79574|EPS8-like 3##AF315687|AHCYL1|10768|adenosylhomocysteinase-like 1##BC111563|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_001242673|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_006621|AHCYL1|10768|adenosylhomocysteinase-like 1##BC065254|AHCYL1|10768|adenosylhomocysteinase-like 1##BC010681|AHCYL1|10768|adenosylhomocysteinase-like 1	0.804976	CTCF.p2:14:0.764
chr1	20966747	20966886	reg1013410.p1	10.081	+	AK093117 AX747934 TSC_hg19_v1_chr1_+_20964439	-2390	+	TSC_hg19_v1_chr1_+_20959970 AB053323 NM_032409 AF316873 BC028215 DQ891033 DQ893330 DQ894212 DQ896646 AB384405	-6819	+	BC048284 NM_001785 AY634312 BC054036 TSC_hg19_v1_chr1_+_20915592 AJ000474 CU691080 S52873	-51284	+	TSC_hg19_v1_chr1_-_20987871 AB062391	21053	-	TSC_hg19_v1_chr1_-_20987882 CU678058 DQ891927 DQ895114	21072	-	AK296041 TSC_hg19_v1_chr1_-_20987897	21080	-	AB053323|PINK1|65018|PTEN induced putative kinase 1##NM_032409|PINK1|65018|PTEN induced putative kinase 1##AF316873|PINK1|65018|PTEN induced putative kinase 1##BC028215|PINK1|65018|PTEN induced putative kinase 1##DQ891033|PINK1|65018|PTEN induced putative kinase 1##DQ893330|PINK1|65018|PTEN induced putative kinase 1##DQ894212|PINK1|65018|PTEN induced putative kinase 1##DQ896646|PINK1|65018|PTEN induced putative kinase 1##BC048284|CDA|978|cytidine deaminase##NM_001785|CDA|978|cytidine deaminase##AY634312|CDA|978|cytidine deaminase##BC054036|CDA|978|cytidine deaminase##AJ000474|CDA|978|cytidine deaminase##S52873|CDA|978|cytidine deaminase##AB062391|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase##DQ891927|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase##DQ895114|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase##AK296041|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase	1.074677	CTCF.p2:19:0.936
chr1	213547768	213547903	reg1014341.p1	10.081	+	TSC_hg19_v1_chr1_+_213224716 AB070706 EF491805	-323075	+	TSC_hg19_v1_chr1_+_213224692 BC104769 BC143449 BC143473 BC143474	-323158	+	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	-323248	+	AK298182 TSC_hg19_v1_chr1_+_214161296 U44060	613454	+	BC024201 NM_002763	614024	+	TSC_hg19_v1_chr1_+_214454550 BC068511 BC049367 BC094747 BC057793 NM_020197 AF226053 BC098133 BC098276 BC098305 BC098335 BC028104 AK313868 AB590916 BC039890	906602	+	AB070706|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC104769|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143449|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143473|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143474|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK298182|PROX1|5629|prospero homeobox 1##U44060|PROX1|5629|prospero homeobox 1##BC024201|PROX1|5629|prospero homeobox 1##NM_002763|PROX1|5629|prospero homeobox 1##BC068511|SMYD2|56950|SET and MYND domain containing 2##BC049367|SMYD2|56950|SET and MYND domain containing 2##BC094747|SMYD2|56950|SET and MYND domain containing 2##BC057793|SMYD2|56950|SET and MYND domain containing 2##NM_020197|SMYD2|56950|SET and MYND domain containing 2##AF226053|SMYD2|56950|SET and MYND domain containing 2##BC098133|SMYD2|56950|SET and MYND domain containing 2##BC098276|SMYD2|56950|SET and MYND domain containing 2##BC098305|SMYD2|56950|SET and MYND domain containing 2##BC098335|SMYD2|56950|SET and MYND domain containing 2##BC028104|SMYD2|56950|SET and MYND domain containing 2##AK313868|SMYD2|56950|SET and MYND domain containing 2##BC039890|SMYD2|56950|SET and MYND domain containing 2	0.903509	CTCF.p2:-6:0.904
chr17	27280650	27280778	reg1011630.p1	10.081	+	TSC_hg19_v1_chr17_-_27278483 AY030283 NM_001033561 NM_020889	-2218	-	BC110882 TSC_hg19_v1_chr17_-_27278336	-2384	-	TSC_hg19_v1_chr17_-_27240983 AK024290	-39701	-	AB527210 TSC_hg19_v1_chr17_-_27333044 AK125377 AK223620 AY038048 NM_001098635 NM_178860 AF502129 AF502130	52311	-	BC008960 NM_016518	89203	+	AK022773 BC027622 AK027498 TSC_hg19_v1_chr17_+_27370199 AF134593 AF136970 CU679199 DQ896538 EU176447 CR457155	89485	+	AY030283|PHF12|57649|PHD finger protein 12##NM_001033561|PHF12|57649|PHD finger protein 12##NM_020889|PHF12|57649|PHD finger protein 12##BC110882|PHF12|57649|PHD finger protein 12##AK024290|PHF12|57649|PHD finger protein 12##AK125377|SEZ6|124925|seizure related 6 homolog (mouse)##AK223620|SEZ6|124925|seizure related 6 homolog (mouse)##AY038048|SEZ6|124925|seizure related 6 homolog (mouse)##NM_001098635|SEZ6|124925|seizure related 6 homolog (mouse)##NM_178860|SEZ6|124925|seizure related 6 homolog (mouse)##AF502129|SEZ6|124925|seizure related 6 homolog (mouse)##AF502130|SEZ6|124925|seizure related 6 homolog (mouse)##BC008960|PIPOX|51268|pipecolic acid oxidase##NM_016518|PIPOX|51268|pipecolic acid oxidase##AK022773|PIPOX|51268|pipecolic acid oxidase##BC027622|PIPOX|51268|pipecolic acid oxidase##AK027498|PIPOX|51268|pipecolic acid oxidase##AF134593|PIPOX|51268|pipecolic acid oxidase##AF136970|PIPOX|51268|pipecolic acid oxidase##DQ896538|PIPOX|51268|pipecolic acid oxidase##EU176447|PIPOX|51268|pipecolic acid oxidase##CR457155|PIPOX|51268|pipecolic acid oxidase	0.73934	CTCF.p2:-4:0.739
chr7	54732155	54732273	reg1012146.p1	10.081	+	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	-122132	+	NM_182595	-1628866	+	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	-3347728	-	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	94665	-	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	94707	-	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	354531	+	NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12##BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit##AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor	0.986374	CTCF.p2:5:0.986
chr3	187465906	187466041	reg1012689.p1	10.080	+	U00115 NM_001706	-2480	-	BC142705 BC150184 Z21943 AK304325 AK308162 TSC_hg19_v1_chr3_-_187463257 BC146796	-2729	-	S67779 NM_001130845	-11708	-	AL833171 TSC_hg19_v1_chr3_+_187870843	404854	+	TSC_hg19_v1_chr3_+_187871663 NM_001167672 AK304035	405662	+	TSC_hg19_v1_chr3_-_187871925 BC042414	405897	-	U00115|BCL6|604|B-cell CLL/lymphoma 6##NM_001706|BCL6|604|B-cell CLL/lymphoma 6##BC142705|BCL6|604|B-cell CLL/lymphoma 6##BC150184|BCL6|604|B-cell CLL/lymphoma 6##Z21943|BCL6|604|B-cell CLL/lymphoma 6##AK304325|BCL6|604|B-cell CLL/lymphoma 6##AK308162|BCL6|604|B-cell CLL/lymphoma 6##BC146796|BCL6|604|B-cell CLL/lymphoma 6##S67779|BCL6|604|B-cell CLL/lymphoma 6##NM_001130845|BCL6|604|B-cell CLL/lymphoma 6##AL833171|LPP|4026|LIM domain containing preferred translocation partner in lipoma##NM_001167672|LPP|4026|LIM domain containing preferred translocation partner in lipoma##AK304035|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC042414|LPP-AS2|339929|LPP antisense RNA 2 (non-protein coding)	0.080975	
chr7	8257193	8257352	reg1010728.p2	10.080	+	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	-248839	+	BC009868 NM_002947	-499035	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-576899	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	44444	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	44519	-	TSC_hg19_v1_chr7_-_8302174 U38260 L01100 BC008640 BC005922 NM_004968	44901	-	NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa##U38260|ICA1|3382|islet cell autoantigen 1, 69kDa##L01100|ICA1|3382|islet cell autoantigen 1, 69kDa##BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa##BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa	0.994381	CTCF.p2:22:0.994
chr10	35852346	35852491	reg1011139.p2	10.079	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	-226624	+	TSC_hg19_v1_chr10_+_35625400 AK314666	-226962	+	AF429969 AK057280 NM_181698	-316466	+	AK074504 NM_153368	41919	+	AB587328 AB043703 NM_031866	77941	-	AF269087 NM_052997	1562366	+	AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AK314666|CCNY|219771|cyclin Y##AF429969|CCNY|219771|cyclin Y##AK057280|CCNY|219771|cyclin Y##NM_181698|CCNY|219771|cyclin Y##AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa##AB043703|FZD8|8325|frizzled family receptor 8##NM_031866|FZD8|8325|frizzled family receptor 8##AF269087|ANKRD30A|91074|ankyrin repeat domain 30A##NM_052997|ANKRD30A|91074|ankyrin repeat domain 30A	0.970827	CTCF.p2:-4:0.971
chr4	1901079	1901204	reg1013807.p1	10.079	+	AF083386 AF083387 AF083388 AF083389 AF083390 AF083391 NM_007331 NM_133330 NM_133331 NM_133335	-6633	+	TSC_hg19_v1_chr4_+_1873169 BC052254 BC020545 BC032731	-27943	+	AK289697 TSC_hg19_v1_chr4_+_1873132 NM_001042424	-28057	+	AF071593 AF071594 NM_133334 AY694128 AB384560	1225	+	AB029013 TSC_hg19_v1_chr4_+_1953907	52729	+	AB044549 CU678178 EU831413 EU831506 AF101434 AK094040 TSC_hg19_v1_chr4_-_2010700 AK222853 BC002764	109552	-	AF083386|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083387|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083388|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083389|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083390|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083391|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_007331|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133330|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133331|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133335|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AK289697|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_001042424|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF071593|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF071594|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133334|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AY694128|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AB029013|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AB044549|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##EU831413|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##EU831506|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AF101434|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AK094040|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AK222853|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##BC002764|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2	0.994497	CTCF.p2:-2:0.994
chr8	120781352	120781475	reg1012983.p1	10.079	+	EU131011 DQ891628 DQ894819 D45421 L35594 AK315253 BC034961 TSC_hg19_v1_chr8_-_120651080 NM_001040092 NM_001130863 NM_006209	-130351	-	NM_002514 AK294289 AK312355 TSC_hg19_v1_chr8_+_120428685 AY082381 X96584 BC015028 CU677181 AB463923 DQ891179 DQ894361 CR457432	-352752	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	-560774	+	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	63664	-	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	86701	-	NM_022783 TSC_hg19_v1_chr8_+_120885965 AK315175 AK225168 AK297822 AL136678 AK225675 BC024746 AK022490 BC012040 AM392576 AM393333 AB527130 AK023916	104591	+	EU131011|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ891628|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ894819|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##D45421|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##L35594|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##AK315253|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC034961|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001040092|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001130863|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_006209|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_002514|NOV|4856|nephroblastoma overexpressed gene##AK294289|NOV|4856|nephroblastoma overexpressed gene##AK312355|NOV|4856|nephroblastoma overexpressed gene##AY082381|NOV|4856|nephroblastoma overexpressed gene##X96584|NOV|4856|nephroblastoma overexpressed gene##BC015028|NOV|4856|nephroblastoma overexpressed gene##DQ891179|NOV|4856|nephroblastoma overexpressed gene##DQ894361|NOV|4856|nephroblastoma overexpressed gene##CR457432|NOV|4856|nephroblastoma overexpressed gene##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein	0.761953	CTCF.p2:4:0.762
chr8	38713754	38713872	reg1011523.p1	10.079	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	-69045	+	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	-69091	+	AY072874 AY072875 TSC_hg19_v1_chr8_+_38614814 AK308849	-99027	+	AK098787 NM_021623 TSC_hg19_v1_chr8_+_38758793 AK296068 AK291842 AF286164	44998	+	NM_153692 AK075205 BC057765 AK300197	117896	+	AL834224 BC004878 BC109050 BC109049 AF353991 AK075027 TSC_hg19_v1_chr8_-_38854016 AK225093	140199	-	AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072874|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072875|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK308849|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_153692|HTRA4|203100|HtrA serine peptidase 4##AK075205|HTRA4|203100|HtrA serine peptidase 4##BC057765|HTRA4|203100|HtrA serine peptidase 4##AK300197|HTRA4|203100|HtrA serine peptidase 4##AL834224|TM2D2|83877|TM2 domain containing 2##BC004878|TM2D2|83877|TM2 domain containing 2##BC109050|TM2D2|83877|TM2 domain containing 2##BC109049|TM2D2|83877|TM2 domain containing 2##AF353991|TM2D2|83877|TM2 domain containing 2##AK075027|TM2D2|83877|TM2 domain containing 2##AK225093|TM2D2|83877|TM2 domain containing 2	0.178732	
chr5	167474485	167474594	reg1011274.p2	10.078	+	HE578282 HE578283 NM_001122679	-762697	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-4541896	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-4544251	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	244282	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	438935	+	TSC_hg19_v1_chr5_+_167956546 AX721195	482078	+	NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	1.771159	CTCF.p2:4:0.979	CTCF.p2:42:0.792
chr12	106751383	106751506	reg1009692.p1	10.077	+	TSC_hg19_v1_chr12_+_106696595 BC033617 NM_152772 BC017872 AF306671 AF306858 AK314055	-54872	+	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	-109597	-	AB011109 BC152462 NM_014840	-217634	-	NM_018082 TSC_hg19_v1_chr12_+_106751498 BX537447	26	+	TSC_hg19_v1_chr12_+_106751589 BC046238 AK291635 AY092084	133	+	NM_001160708 AK122713	425	+	BC033617|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_152772|TCP11L2|255394|t-complex 11 (mouse)-like 2##BC017872|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306671|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306858|TCP11L2|255394|t-complex 11 (mouse)-like 2##AK314055|TCP11L2|255394|t-complex 11 (mouse)-like 2##BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4##AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BC046238|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AK291635|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AY092084|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##NM_001160708|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AK122713|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	0.166863	
chr13	109614018	109614149	reg1011516.p1	10.077	+	AB290159 AK127806 NM_001198950	-332514	+	AB020672 BC146791 NM_015011 AL834447	-365569	+	DQ857728 TSC_hg19_v1_chr13_+_108955871	-658266	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	824825	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	1188652	-	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	1345426	-	AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1	0.993904	CTCF.p2:-14:0.994
chr14	95662732	95662859	reg1011718.p1	10.077	+	TSC_hg19_v1_chr14_+_95624023 BC040596	-38774	+	TSC_hg19_v1_chr14_-_95623867 BC046934 AB023145 BC150287 NM_177438	-39003	-	AY929254 AY929255 AY929256 TSC_hg19_v1_chr14_-_95623633	-39173	-	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	123388	-	AK131436 BC146604 BX248076 NM_152592	279309	-	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	338220	-	BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC046934|DICER1|23405|dicer 1, ribonuclease type III##AB023145|DICER1|23405|dicer 1, ribonuclease type III##BC150287|DICER1|23405|dicer 1, ribonuclease type III##NM_177438|DICER1|23405|dicer 1, ribonuclease type III##AY929254|DICER1|23405|dicer 1, ribonuclease type III##AY929255|DICER1|23405|dicer 1, ribonuclease type III##AY929256|DICER1|23405|dicer 1, ribonuclease type III##AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)	0.0	
chr2	70368279	70368438	reg1011624.p1	10.077	+	TSC_hg19_v1_chr2_+_70314983 BC013020	-53360	+	AK130439 TSC_hg19_v1_chr2_+_70314932	-53441	+	TSC_hg19_v1_chr2_+_70314854 Z29505 X78137 AB464656 CU691762	-53531	+	TSC_hg19_v1_chr2_-_70418137 BC002825 BC005079 AK000565 NM_017880	49763	-	CU677529 AB528896 BC015944 M77142 TSC_hg19_v1_chr2_-_70475711 NM_022037 NM_022173 AK303345	107361	-	TSC_hg19_v1_chr2_+_70485278 NM_016297 AF181490 BC051891 AY359063 BC033815 AK314453 AK225302 AK303043 BC022259 AB020715 DQ890801 DQ893956 CU689758	116892	+	AK130439|PCBP1|5093|poly(rC) binding protein 1##Z29505|PCBP1|5093|poly(rC) binding protein 1##X78137|PCBP1|5093|poly(rC) binding protein 1##BC002825|C2orf42|54980|chromosome 2 open reading frame 42##BC005079|C2orf42|54980|chromosome 2 open reading frame 42##AK000565|C2orf42|54980|chromosome 2 open reading frame 42##NM_017880|C2orf42|54980|chromosome 2 open reading frame 42##BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_016297|PCYOX1|51449|prenylcysteine oxidase 1##AF181490|PCYOX1|51449|prenylcysteine oxidase 1##BC051891|PCYOX1|51449|prenylcysteine oxidase 1##AY359063|PCYOX1|51449|prenylcysteine oxidase 1##BC033815|PCYOX1|51449|prenylcysteine oxidase 1##AK314453|PCYOX1|51449|prenylcysteine oxidase 1##AK225302|PCYOX1|51449|prenylcysteine oxidase 1##AK303043|PCYOX1|51449|prenylcysteine oxidase 1##BC022259|PCYOX1|51449|prenylcysteine oxidase 1##AB020715|PCYOX1|51449|prenylcysteine oxidase 1##DQ890801|PCYOX1|51449|prenylcysteine oxidase 1##DQ893956|PCYOX1|51449|prenylcysteine oxidase 1	0.0	
chr7	125311152	125311287	reg1011378.p2	10.076	+	NM_001042594 NM_015450	-741183	-	BC130600 BC130604 NM_001024603	-880417	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	-905423	-	NM_000845	1572349	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	1581146	-	TSC_hg19_v1_chr7_-_126893165 AK290197	1581933	-	NM_001042594|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_015450|POT1|25913|protection of telomeres 1 homolog (S. pombe)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##AK290197|GRM8|2918|glutamate receptor, metabotropic 8	0.877635	CTCF.p2:6:0.878
chrX	80451334	80451464	reg1012889.p1	10.076	+	BC111490 AY497046 AY497048 AY497049 AY497050 AY497051 AY497052 AY497053 AY497054 AY497055 NM_153252	-386192	-	BX537938 NM_152630 BC030784 AK313875 BC028710 BC034979	-775437	+	AK128147 NM_001170574	-860397	+	NM_003022 AK024892 AK309350 BC103762 TSC_hg19_v1_chrX_+_80457495	6004	+	AK094058 AX748432 NM_030763	6041	-	TSC_hg19_v1_chrX_+_80457572 AK309351	6177	+	BC111490|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497046|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497048|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497049|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497050|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497051|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497052|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497053|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497054|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497055|BRWD3|254065|bromodomain and WD repeat domain containing 3##NM_153252|BRWD3|254065|bromodomain and WD repeat domain containing 3##BX537938|FAM46D|169966|family with sequence similarity 46, member D##NM_152630|FAM46D|169966|family with sequence similarity 46, member D##BC030784|FAM46D|169966|family with sequence similarity 46, member D##AK313875|FAM46D|169966|family with sequence similarity 46, member D##BC028710|FAM46D|169966|family with sequence similarity 46, member D##BC034979|FAM46D|169966|family with sequence similarity 46, member D##AK128147|FAM46D|169966|family with sequence similarity 46, member D##NM_001170574|FAM46D|169966|family with sequence similarity 46, member D##NM_003022|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK024892|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309350|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##BC103762|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	1.0129	CTCF.p2:8:0.999
chr16	5142398	5142512	reg1010768.p1	10.075	+	NM_019109 TSC_hg19_v1_chr16_+_5121825 AK075373 BC031095 AB019038 BC004402 AK311475 CU678708 DQ895010 EU176309	-20625	+	TSC_hg19_v1_chr16_-_5116030 BC033681 AY358483 NM_001098514 NM_152459	-26368	-	TSC_hg19_v1_chr16_-_5115951 AK075242	-26500	-	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	5313	-	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	926770	+	TSC_hg19_v1_chr16_+_6533765 BC033885	1391320	+	NM_019109|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK075373|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC031095|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AB019038|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC004402|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK311475|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##DQ895010|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##EU176309|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC033681|C16orf89|146556|chromosome 16 open reading frame 89##AY358483|C16orf89|146556|chromosome 16 open reading frame 89##NM_001098514|C16orf89|146556|chromosome 16 open reading frame 89##NM_152459|C16orf89|146556|chromosome 16 open reading frame 89##AK075242|C16orf89|146556|chromosome 16 open reading frame 89##BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	0.989712	CTCF.p2:12:0.990
chr19	52846928	52847028	reg1011305.p1	10.075	+	NM_001161425 NM_001161426 NM_001161427 AX721154 AK290888 BC039903 BC105967	-7425	+	BC007056 BC054018 NM_144684 AK096559 AK096442 AK303271 AX721138 AL832560 BC065503 AY512662 BC018783	-46541	+	TSC_hg19_v1_chr19_+_52772847 BX538183 EU832461 EU832543	-74122	+	AK093359 AX748076 NM_173530	1703	+	NM_001145434 AK092566 AX747602 TSC_hg19_v1_chr19_+_52873197 BC056265 BC058819 AK297834 BC013198 AF088022	26213	+	TSC_hg19_v1_chr19_-_52900989 BX537909 AK097590	54024	-	NM_001161425|ZNF610|162963|zinc finger protein 610##NM_001161426|ZNF610|162963|zinc finger protein 610##NM_001161427|ZNF610|162963|zinc finger protein 610##AK290888|ZNF610|162963|zinc finger protein 610##BC039903|ZNF610|162963|zinc finger protein 610##BC105967|ZNF610|162963|zinc finger protein 610##BC007056|ZNF480|147657|zinc finger protein 480##BC054018|ZNF480|147657|zinc finger protein 480##NM_144684|ZNF480|147657|zinc finger protein 480##AK096559|ZNF480|147657|zinc finger protein 480##AK096442|ZNF480|147657|zinc finger protein 480##AK303271|ZNF480|147657|zinc finger protein 480##AL832560|ZNF480|147657|zinc finger protein 480##BC065503|ZNF480|147657|zinc finger protein 480##AY512662|ZNF480|147657|zinc finger protein 480##BC018783|ZNF480|147657|zinc finger protein 480##BX538183|ZNF766|90321|zinc finger protein 766##EU832461|ZNF766|90321|zinc finger protein 766##EU832543|ZNF766|90321|zinc finger protein 766##AK093359|ZNF610|162963|zinc finger protein 610##NM_173530|ZNF610|162963|zinc finger protein 610##NM_001145434|ZNF880|400713|zinc finger protein 880##BC056265|ZNF880|400713|zinc finger protein 880##BC058819|ZNF880|400713|zinc finger protein 880##AK297834|ZNF880|400713|zinc finger protein 880##BC013198|ZNF880|400713|zinc finger protein 880##AF088022|ZNF880|400713|zinc finger protein 880##BX537909|LOC284373|284373|uncharacterized LOC284373##AK097590|LOC284373|284373|uncharacterized LOC284373	0.981642	CTCF.p2:0:0.982
chr2	122949062	122949165	reg1011551.p1	10.074	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-435876	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-454648	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-541468	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	1833751	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	4464594	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	4464679	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.025774	
chr7	115813224	115813374	reg1013232.p1	10.074	+	TSC_hg19_v1_chr7_-_115670864 CR933605 NM_001018058 NM_012252	-142447	-	TSC_hg19_v1_chr7_-_115670820 AK313546	-142481	-	TSC_hg19_v1_chr7_-_115670796 D43945 BC029891	-142513	-	NM_015641 AK299104 TSC_hg19_v1_chr7_+_115850592 BC001451 AK021575 AK300546 AK309324 AK222840 AF245356 AJ250865 AK315644 AB529039 EU176352 EU176694	37354	+	AK310995 NM_152829 AK291802 AF245357	49720	+	TSC_hg19_v1_chr7_+_116139705 AY353255 BC005256 NM_001206747 NM_001233 NM_198212 AK310786 AK311964 AF035752 AB451285 AB451417 AB489180 AM393815 BT007051 CR407685	326428	+	CR933605|TFEC|22797|transcription factor EC##NM_001018058|TFEC|22797|transcription factor EC##NM_012252|TFEC|22797|transcription factor EC##AK313546|TFEC|22797|transcription factor EC##D43945|TFEC|22797|transcription factor EC##BC029891|TFEC|22797|transcription factor EC##NM_015641|TES|26136|testis derived transcript (3 LIM domains)##AK299104|TES|26136|testis derived transcript (3 LIM domains)##BC001451|TES|26136|testis derived transcript (3 LIM domains)##AK021575|TES|26136|testis derived transcript (3 LIM domains)##AK300546|TES|26136|testis derived transcript (3 LIM domains)##AK309324|TES|26136|testis derived transcript (3 LIM domains)##AK222840|TES|26136|testis derived transcript (3 LIM domains)##AF245356|TES|26136|testis derived transcript (3 LIM domains)##AJ250865|TES|26136|testis derived transcript (3 LIM domains)##AK315644|TES|26136|testis derived transcript (3 LIM domains)##EU176352|TES|26136|testis derived transcript (3 LIM domains)##EU176694|TES|26136|testis derived transcript (3 LIM domains)##AK310995|TES|26136|testis derived transcript (3 LIM domains)##NM_152829|TES|26136|testis derived transcript (3 LIM domains)##AK291802|TES|26136|testis derived transcript (3 LIM domains)##AF245357|TES|26136|testis derived transcript (3 LIM domains)##AY353255|CAV2|858|caveolin 2##BC005256|CAV2|858|caveolin 2##NM_001206747|CAV2|858|caveolin 2##NM_001233|CAV2|858|caveolin 2##NM_198212|CAV2|858|caveolin 2##AK310786|CAV2|858|caveolin 2##AK311964|CAV2|858|caveolin 2##AF035752|CAV2|858|caveolin 2##AB451285|CAV2|858|caveolin 2##AB451417|CAV2|858|caveolin 2##AM393815|CAV2|858|caveolin 2##BT007051|CAV2|858|caveolin 2##CR407685|CAV2|858|caveolin 2	0.284286	CTCF.p2:-21:0.284
chr14	91164046	91164164	reg1010909.p1	10.073	+	TSC_hg19_v1_chr14_+_90863372 BC011834 BC047523 U16851 BC000454 BC008597 AK289937 M27319	-300678	+	TSC_hg19_v1_chr14_+_90863329 NM_006888	-300782	+	BC008925 BC033136 BC098568 TSC_hg19_v1_chr14_-_90798286 AK000870 AK294958 BC021805 NM_017970	-365739	-	AB527232 TSC_hg19_v1_chr14_-_91282750	118593	-	NM_001010854 TSC_hg19_v1_chr14_-_91282765	118660	-	TSC_hg19_v1_chr14_-_91526731 CU677851	362649	-	BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008925|C14orf102|55051|chromosome 14 open reading frame 102##BC033136|C14orf102|55051|chromosome 14 open reading frame 102##BC098568|C14orf102|55051|chromosome 14 open reading frame 102##AK000870|C14orf102|55051|chromosome 14 open reading frame 102##AK294958|C14orf102|55051|chromosome 14 open reading frame 102##BC021805|C14orf102|55051|chromosome 14 open reading frame 102##NM_017970|C14orf102|55051|chromosome 14 open reading frame 102##NM_001010854|TTC7B|145567|tetratricopeptide repeat domain 7B	0.257922	CTCF.p2:4:0.258
chr2	188364830	188364919	reg1009192.p1	10.073	+	DQ280491 U17473 L76380 AK291630 AK292998 DQ280490 NM_005795	-51928	-	AK128006 BC031094 NM_182521	-650978	-	TSC_hg19_v1_chr2_+_187558788 AK091423 AK289737 AX746973 BC060872 NM_177454 AF361495 CU687488	-806098	+	J03225 AF021834 TSC_hg19_v1_chr2_-_188419163 AK313562 BC015514 BC014332	54236	-	TSC_hg19_v1_chr2_-_188419185 NM_001032281 NM_006287	54327	-	AK055718 NM_001252668 NM_001252669 NM_016315 TSC_hg19_v1_chr2_+_189156445	791551	+	DQ280491|CALCRL|10203|calcitonin receptor-like##U17473|CALCRL|10203|calcitonin receptor-like##L76380|CALCRL|10203|calcitonin receptor-like##AK291630|CALCRL|10203|calcitonin receptor-like##AK292998|CALCRL|10203|calcitonin receptor-like##NM_005795|CALCRL|10203|calcitonin receptor-like##AK128006|ZSWIM2|151112|zinc finger, SWIM-type containing 2##BC031094|ZSWIM2|151112|zinc finger, SWIM-type containing 2##NM_182521|ZSWIM2|151112|zinc finger, SWIM-type containing 2##AK091423|FAM171B|165215|family with sequence similarity 171, member B##AK289737|FAM171B|165215|family with sequence similarity 171, member B##BC060872|FAM171B|165215|family with sequence similarity 171, member B##NM_177454|FAM171B|165215|family with sequence similarity 171, member B##AF361495|FAM171B|165215|family with sequence similarity 171, member B##J03225|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AF021834|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK313562|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC015514|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC014332|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK055718|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252668|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252669|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_016315|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	0.998372	CTCF.p2:-14:0.998
chr10	81269433	81269539	reg1011362.p2	10.072	+	TSC_hg19_v1_chr10_-_81205381 AK308876 AK075279 BC053564 BC039249 BC028617 NM_153367	-64226	-	TSC_hg19_v1_chr10_+_81107279 AB529152 CU678858 EU831447	-162199	+	BC013204 BC110299 TSC_hg19_v1_chr10_+_81107252	-162237	+	BC070048 NM_001099692	2870	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	50665	-	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	101218	+	AK308876|ZCCHC24|219654|zinc finger, CCHC domain containing 24##AK075279|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC053564|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC039249|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC028617|ZCCHC24|219654|zinc finger, CCHC domain containing 24##NM_153367|ZCCHC24|219654|zinc finger, CCHC domain containing 24##EU831447|PPIF|10105|peptidylprolyl isomerase F##BC013204|PPIF|10105|peptidylprolyl isomerase F##BC110299|PPIF|10105|peptidylprolyl isomerase F##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1	0.979768	CTCF.p2:1:0.980
chr17	48029988	48030086	reg1011733.p1	10.072	+	AF515828 AF515829 AF515830 AF515831 AF521560 AY471574 BC100840 BC100841 BC100842 BC100843 BC111857 BC111858 NM_001077503 NM_001077504 NM_001077505 NM_001077506 NM_170685	-104659	-	AK127421 NM_001242791	-106766	+	TSC_hg19_v1_chr17_+_47866119 AF074606 AB463912 CU689460 DQ890883 DQ894037	-163879	+	BC016145 NM_138281 AF254115	16525	+	U31762 TSC_hg19_v1_chr17_+_48049688	19646	+	NM_001934 U73328	20092	+	AF515828|TAC4|255061|tachykinin 4 (hemokinin)##AF515829|TAC4|255061|tachykinin 4 (hemokinin)##AF515830|TAC4|255061|tachykinin 4 (hemokinin)##AF515831|TAC4|255061|tachykinin 4 (hemokinin)##AF521560|TAC4|255061|tachykinin 4 (hemokinin)##AY471574|TAC4|255061|tachykinin 4 (hemokinin)##BC100840|TAC4|255061|tachykinin 4 (hemokinin)##BC100841|TAC4|255061|tachykinin 4 (hemokinin)##BC100842|TAC4|255061|tachykinin 4 (hemokinin)##BC100843|TAC4|255061|tachykinin 4 (hemokinin)##BC111857|TAC4|255061|tachykinin 4 (hemokinin)##BC111858|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077503|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077504|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077505|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077506|TAC4|255061|tachykinin 4 (hemokinin)##NM_170685|TAC4|255061|tachykinin 4 (hemokinin)##AK127421|FLJ45513|729220|uncharacterized LOC729220##NM_001242791|FLJ45513|729220|uncharacterized LOC729220##AF074606|KAT7|11143|K(lysine) acetyltransferase 7##DQ890883|KAT7|11143|K(lysine) acetyltransferase 7##DQ894037|KAT7|11143|K(lysine) acetyltransferase 7##BC016145|DLX4|1748|distal-less homeobox 4##NM_138281|DLX4|1748|distal-less homeobox 4##AF254115|DLX4|1748|distal-less homeobox 4##U31762|DLX4|1748|distal-less homeobox 4##NM_001934|DLX4|1748|distal-less homeobox 4##U73328|DLX4|1748|distal-less homeobox 4	0.149598	
chr1	91187101	91187221	reg1011811.p2	10.072	+	BC126439 BC126441 AY338397 NM_020063	-4376	-	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	-726445	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-899597	+	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	299877	-	TSC_hg19_v1_chr1_-_91487583 BC041138 AK291520	300402	-	TSC_hg19_v1_chr1_-_91487586 BC092462	300428	-	BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644##BC041138|ZNF644|84146|zinc finger protein 644##AK291520|ZNF644|84146|zinc finger protein 644##BC092462|ZNF644|84146|zinc finger protein 644	0.302443	CTCF.p2:-2:0.262
chr7	111126749	111126879	reg1012871.p1	10.072	+	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-395691	+	NM_001024607	-2602178	-	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-2916440	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	75670	-	TSC_hg19_v1_chr7_-_111428948 AK294820	302197	-	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	719451	-	NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK294820|DOCK4|9732|dedicator of cytokinesis 4##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4	0.751123	CTCF.p2:-1:0.751
chr1	181392855	181392955	reg1010763.p2	10.070	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-335040	+	NM_016545	-335268	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-389755	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	59795	+	BC137223 BC137224 AK128654 NM_001009992	637892	-	TSC_hg19_v1_chr1_-_182354649 AK301600	961777	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.955299	CTCF.p2:-11:0.955
chr20	3657415	3657533	reg1010769.p1	10.070	+	AF253318 AJ291673 AJ291674 AJ291675 NM_022139 NM_145762 BC172271 BC172567	-13424	-	TSC_hg19_v1_chr20_+_3451737 AF106861	-205734	+	TSC_hg19_v1_chr20_+_3451685 AK293010 NM_001207047 NM_139321 NM_139322 AK302730 BC101705	-205805	+	AY223855 AY223851 AY223850 AK095953 AK126498 AK304037 AF466287 AK123015 AK226148 BC125112 BC125113 AK300429 AY223853 AF466289 AB055891 AY223852 AY223854 NM_025220 NM_153202 AY358314 BC062663	5286	-	AF230073 BC141884 NM_023068	30300	-	NM_001197327 NM_052970 AK297120 TSC_hg19_v1_chr20_+_3713341 AK301294 BC090857 BC110881 AK056712 BC117284 BC126263 BC143932	55893	+	AF253318|GFRA4|64096|GDNF family receptor alpha 4##AJ291673|GFRA4|64096|GDNF family receptor alpha 4##AJ291674|GFRA4|64096|GDNF family receptor alpha 4##AJ291675|GFRA4|64096|GDNF family receptor alpha 4##NM_022139|GFRA4|64096|GDNF family receptor alpha 4##NM_145762|GFRA4|64096|GDNF family receptor alpha 4##BC172271|GFRA4|64096|GDNF family receptor alpha 4##BC172567|GFRA4|64096|GDNF family receptor alpha 4##AF106861|ATRN|8455|attractin##AK293010|ATRN|8455|attractin##NM_001207047|ATRN|8455|attractin##NM_139321|ATRN|8455|attractin##NM_139322|ATRN|8455|attractin##AK302730|ATRN|8455|attractin##BC101705|ATRN|8455|attractin##AY223855|ADAM33|80332|ADAM metallopeptidase domain 33##AY223851|ADAM33|80332|ADAM metallopeptidase domain 33##AY223850|ADAM33|80332|ADAM metallopeptidase domain 33##AK095953|ADAM33|80332|ADAM metallopeptidase domain 33##AK126498|ADAM33|80332|ADAM metallopeptidase domain 33##AK304037|ADAM33|80332|ADAM metallopeptidase domain 33##AF466287|ADAM33|80332|ADAM metallopeptidase domain 33##AK123015|ADAM33|80332|ADAM metallopeptidase domain 33##AK226148|ADAM33|80332|ADAM metallopeptidase domain 33##BC125112|ADAM33|80332|ADAM metallopeptidase domain 33##BC125113|ADAM33|80332|ADAM metallopeptidase domain 33##AK300429|ADAM33|80332|ADAM metallopeptidase domain 33##AY223853|ADAM33|80332|ADAM metallopeptidase domain 33##AF466289|ADAM33|80332|ADAM metallopeptidase domain 33##AB055891|ADAM33|80332|ADAM metallopeptidase domain 33##AY223852|ADAM33|80332|ADAM metallopeptidase domain 33##AY223854|ADAM33|80332|ADAM metallopeptidase domain 33##NM_025220|ADAM33|80332|ADAM metallopeptidase domain 33##NM_153202|ADAM33|80332|ADAM metallopeptidase domain 33##AY358314|ADAM33|80332|ADAM metallopeptidase domain 33##BC062663|ADAM33|80332|ADAM metallopeptidase domain 33##AF230073|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##BC141884|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##NM_023068|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##NM_001197327|HSPA12B|116835|heat shock 70kD protein 12B##NM_052970|HSPA12B|116835|heat shock 70kD protein 12B##AK297120|HSPA12B|116835|heat shock 70kD protein 12B##AK301294|HSPA12B|116835|heat shock 70kD protein 12B##BC090857|HSPA12B|116835|heat shock 70kD protein 12B##BC110881|HSPA12B|116835|heat shock 70kD protein 12B##AK056712|HSPA12B|116835|heat shock 70kD protein 12B##BC117284|HSPA12B|116835|heat shock 70kD protein 12B##BC126263|HSPA12B|116835|heat shock 70kD protein 12B##BC143932|HSPA12B|116835|heat shock 70kD protein 12B	0.991639	CTCF.p2:-22:0.992
chr1	242815232	242815354	reg1012175.p1	10.069	+	AK098092 NM_152666	-127296	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	-202523	-	BC132986 BC132988 AF276659 BC127722 NM_001004343	-652919	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	603063	-	TSC_hg19_v1_chr1_-_243418566 AK310003 BC050722	603279	-	TSC_hg19_v1_chr1_-_243418675 NM_001042404 NM_001042405 NM_014812	603398	-	AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa##AK310003|CEP170|9859|centrosomal protein 170kDa##BC050722|CEP170|9859|centrosomal protein 170kDa##NM_001042404|CEP170|9859|centrosomal protein 170kDa##NM_001042405|CEP170|9859|centrosomal protein 170kDa##NM_014812|CEP170|9859|centrosomal protein 170kDa	0.869241	CTCF.p2:0:0.869
chr10	106340682	106340824	reg1013083.p1	10.068	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-227212	+	AB051541 TSC_hg19_v1_chr10_-_106098200 AK129877	-242564	-	BC070108 NM_033397	-247091	-	AB028982 NM_014978	60105	+	BC117417 TSC_hg19_v1_chr10_+_106401047	60292	+	TSC_hg19_v1_chr10_-_108459000 AK123752	2118306	-	BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AB051541|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##BC070108|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##NM_033397|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	0.999779	CTCF.p2:-15:1.000
chr3	116477167	116477289	reg1011678.p2	10.068	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-312855	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-312897	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-1134809	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	2276305	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	2276455	-	AK097667 NM_152538 AK292387	2387669	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.865171	CTCF.p2:14:0.865
chr4	11767626	11767749	reg1012307.p1	10.068	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-337155	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-1081286	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-1308677	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	1718264	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	1718288	-	AB463932 AF009801 EU446467 BC111966 NM_001189	1778388	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.87769	CTCF.p2:-4:0.878
chr4	130283984	130284134	reg1013425.p1	10.068	+	NM_001099783	-266778	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-269192	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-269469	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	3786397	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	3789224	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	4838859	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.998852	CTCF.p2:-23:0.999
chr10	123368244	123368369	reg1011301.p1	10.067	+	X52832 U11814 M87770 M87772 AB030073 AB030074 AB030075 AB030076 AB030077 AB030078 M80634 M87771 TSC_hg19_v1_chr10_-_123357946 M35718 M97193 BC096749 AK026508 BC039243 NM_000141 NM_001144917 NM_001144918 NM_001144919 NM_022970	-10548	-	AK294026 NM_001144915	-12148	-	AK308621 NM_001144916	-14535	-	TSC_hg19_v1_chr10_-_123687547 AK296356 AF079098 AF079099 AK303604 AK313057 BC022026 NM_001001976 NM_007041	319219	-	TSC_hg19_v1_chr10_-_123687979 AK299101 AK308926	319694	-	TSC_hg19_v1_chr10_-_123734310 AK301658 AK056579	366008	-	X52832|FGFR2|2263|fibroblast growth factor receptor 2##U11814|FGFR2|2263|fibroblast growth factor receptor 2##M87770|FGFR2|2263|fibroblast growth factor receptor 2##M87772|FGFR2|2263|fibroblast growth factor receptor 2##AB030073|FGFR2|2263|fibroblast growth factor receptor 2##AB030074|FGFR2|2263|fibroblast growth factor receptor 2##AB030075|FGFR2|2263|fibroblast growth factor receptor 2##AB030076|FGFR2|2263|fibroblast growth factor receptor 2##AB030077|FGFR2|2263|fibroblast growth factor receptor 2##AB030078|FGFR2|2263|fibroblast growth factor receptor 2##M80634|FGFR2|2263|fibroblast growth factor receptor 2##M87771|FGFR2|2263|fibroblast growth factor receptor 2##M97193|FGFR2|2263|fibroblast growth factor receptor 2##BC096749|FGFR2|2263|fibroblast growth factor receptor 2##AK026508|FGFR2|2263|fibroblast growth factor receptor 2##BC039243|FGFR2|2263|fibroblast growth factor receptor 2##NM_000141|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144917|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144918|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144919|FGFR2|2263|fibroblast growth factor receptor 2##NM_022970|FGFR2|2263|fibroblast growth factor receptor 2##AK294026|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2##AK308621|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144916|FGFR2|2263|fibroblast growth factor receptor 2##AK296356|ATE1|11101|arginyltransferase 1##AF079098|ATE1|11101|arginyltransferase 1##AF079099|ATE1|11101|arginyltransferase 1##AK303604|ATE1|11101|arginyltransferase 1##AK313057|ATE1|11101|arginyltransferase 1##BC022026|ATE1|11101|arginyltransferase 1##NM_001001976|ATE1|11101|arginyltransferase 1##NM_007041|ATE1|11101|arginyltransferase 1##AK299101|ATE1|11101|arginyltransferase 1##AK308926|ATE1|11101|arginyltransferase 1##AK301658|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##AK056579|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	0.686428	CTCF.p2:14:0.686
chr1	149764114	149764230	reg1009061.p1	10.066	+	X14355 AK311303 NM_000566 X14356 AK291451 BC032634 AB527585 BC152383 CU689454 DQ890842 DQ893997 L03418	-9900	+	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	-211149	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	-364976	-	BC110793 AK289664 AK299108 AK296916 NM_001024599 NM_001161334	19746	-	NM_001123375	21063	-	AK316561 NM_001034077 NM_003548 BC093969 BC112193 BC108260 BC019846 AB590914 CR542172	40062	+	X14355|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##NM_000566|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##X14356|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK291451|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC032634|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC152383|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ890842|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ893997|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##L03418|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##AK289664|HIST2H2BF|440689|histone cluster 2, H2bf##AK299108|HIST2H2BF|440689|histone cluster 2, H2bf##AK296916|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001161334|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001123375|HIST2H3D|653604|histone cluster 2, H3d##NM_001034077|HIST2H4B|554313|histone cluster 2, H4b##NM_003548|HIST2H4A|8370|histone cluster 2, H4a##BC093969|HIST2H4A|8370|histone cluster 2, H4a##BC112193|HIST2H4A|8370|histone cluster 2, H4a##BC108260|HIST2H4A|8370|histone cluster 2, H4a##BC019846|HIST2H4A|8370|histone cluster 2, H4a##CR542172|HIST2H4A|8370|histone cluster 2, H4a	0.052071	
chr12	124390005	124390141	reg1011715.p1	10.066	+	NM_207437	-143032	+	TSC_hg19_v1_chr12_+_124196946 AK289391 AF112972 HQ258004	-193047	+	TSC_hg19_v1_chr12_+_124196899 BC022300	-193177	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	67126	-	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	67656	+	AK126577 NM_181709	383636	+	NM_207437|DNAH10|196385|dynein, axonemal, heavy chain 10##AK289391|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##AF112972|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##HQ258004|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##BC022300|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A	0.937302	CTCF.p2:3:0.937
chr6	36727055	36727159	reg1009935.p2	10.066	+	AK125083 TSC_hg19_v1_chr6_+_36665627	-61479	+	TSC_hg19_v1_chr6_+_36646490 BC013967 AB209881 BC001935 BC000312 L25610 L26165 U03106 S67388 BC000275 L47232 L47233 AY008263	-80582	+	NM_000389 TSC_hg19_v1_chr6_+_36646486 AK309512 NM_001220778 U09579	-80636	+	TSC_hg19_v1_chr6_-_36807217 NM_020939	80111	-	TSC_hg19_v1_chr6_-_36807775 AB046819	80685	-	DQ892513 DQ895727 AB528504 TSC_hg19_v1_chr6_-_36842573 AK026636	115470	-	AK125083|RAB44|401258|RAB44, member RAS oncogene family##BC013967|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AB209881|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC001935|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000312|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L25610|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L26165|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U03106|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##S67388|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000275|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47232|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47233|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_000389|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK309512|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_001220778|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U09579|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_020939|CPNE5|57699|copine V##AB046819|CPNE5|57699|copine V##DQ892513|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##DQ895727|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##AK026636|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1	0.941925	CTCF.p2:19:0.942
chr12	8390183	8390290	reg1011677.p2	10.064	+	BC042608 AK001270 NM_018088	-10033	-	TSC_hg19_v1_chr12_+_8332811 AK096301 BC048994 AK311411 BC034777	-57410	+	NM_001004328	-65087	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	218366	+	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	275995	+	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	303238	-	BC042608|FAM90A1|55138|family with sequence similarity 90, member A1##AK001270|FAM90A1|55138|family with sequence similarity 90, member A1##NM_018088|FAM90A1|55138|family with sequence similarity 90, member A1##AK096301|FAM66C|440078|family with sequence similarity 66, member C##BC048994|FAM66C|440078|family with sequence similarity 66, member C##BC034777|FAM66C|440078|family with sequence similarity 66, member C##NM_001004328|ZNF705A|440077|zinc finger protein 705A##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E	0.993599	CTCF.p2:7:0.994
chr1	79663246	79663348	reg1012053.p1	10.064	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-190870	-	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-547799	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	-577166	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	2108630	+	AF104266 AF104938 AF104939 NM_012302	2602784	+	AK097722 TSC_hg19_v1_chr1_-_84326308	4662971	-	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.983345	CTCF.p2:3:0.983
chr6	10478809	10478947	reg1013043.p1	10.064	+	AK296737 NM_001042425	-59087	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	-63410	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	-63603	-	AK307373 NM_145649 AK291767 AK310216 AL832714	42730	+	NM_001491	77070	+	AK313426 BX647668 NM_145655 BX647576 AL832719 BC130524	107136	+	AK296737|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001042425|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##AK307373|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145649|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK291767|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK310216|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832714|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK313426|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647668|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145655|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647576|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832719|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BC130524|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	0.951073	CTCF.p2:-15:0.951
chr1	204367780	204367901	reg1010073.p1	10.063	+	AB023186 BC152475 NM_014935 TSC_hg19_v1_chr1_-_204329058	-38790	-	CU691306 TSC_hg19_v1_chr1_-_204183117 AB075871 BC058832 AK124645 NM_198447	-184713	-	AF218017 BC022819 AK291695 NM_002256 TSC_hg19_v1_chr1_-_204165620	-202259	-	TSC_hg19_v1_chr1_+_204380508 BC009873	12681	+	TSC_hg19_v1_chr1_-_204380946 BC065280 AK222877 NM_032833 AK027650 AK303535 AK316092	13100	-	BC132876 BC136645 BC144342 NM_002646 AK308153	91658	-	AB023186|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC152475|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##NM_014935|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##AB075871|GOLT1A|127845|golgi transport 1A##BC058832|GOLT1A|127845|golgi transport 1A##AK124645|GOLT1A|127845|golgi transport 1A##NM_198447|GOLT1A|127845|golgi transport 1A##AF218017|KISS1|3814|KiSS-1 metastasis-suppressor##BC022819|KISS1|3814|KiSS-1 metastasis-suppressor##AK291695|KISS1|3814|KiSS-1 metastasis-suppressor##NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor##BC065280|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK222877|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_032833|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK027650|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK303535|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##BC132876|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC136645|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC144342|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_002646|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AK308153|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide	0.992722	CTCF.p2:19:0.993
chr19	17564360	17564504	reg1013143.p1	10.063	+	NM_001190844	-5057	-	TSC_hg19_v1_chr19_+_17530872 BC011840 NM_138401 BC007883	-33533	+	TSC_hg19_v1_chr19_+_17530855 AK057057 AK289487	-33584	+	BC014127 NM_138454 DQ426894	7311	-	AK294238 TSC_hg19_v1_chr19_+_17579599	15156	+	TSC_hg19_v1_chr19_+_17581292 AK299852 BC059399 NM_198580	16868	+	NM_001190844|TMEM221|100130519|transmembrane protein 221##BC011840|FAM125A|93343|family with sequence similarity 125, member A##NM_138401|FAM125A|93343|family with sequence similarity 125, member A##BC007883|FAM125A|93343|family with sequence similarity 125, member A##AK057057|FAM125A|93343|family with sequence similarity 125, member A##AK289487|FAM125A|93343|family with sequence similarity 125, member A##BC014127|NXNL1|115861|nucleoredoxin-like 1##NM_138454|NXNL1|115861|nucleoredoxin-like 1##DQ426894|NXNL1|115861|nucleoredoxin-like 1##AK294238|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK299852|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##BC059399|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##NM_198580|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1	0.954125	CTCF.p2:-11:0.954
chr5	137839550	137839678	reg1013358.p1	10.063	+	TSC_hg19_v1_chr5_+_137801192 NM_001964 X52541 BC073983 M62829 M80583 BC041701 CU687282 AB591041 EU832310 EU832395	-38300	+	TSC_hg19_v1_chr5_+_137801167 AK298101 AK301065	-38443	+	AY562240 TSC_hg19_v1_chr5_+_137774899 AF251041	-64708	+	TSC_hg19_v1_chr5_-_137848536 X80916	8939	-	TSC_hg19_v1_chr5_-_137854498 BT007374 DQ890706 DQ893890	14910	-	TSC_hg19_v1_chr5_-_137878826 M75715	39203	-	NM_001964|EGR1|1958|early growth response 1##X52541|EGR1|1958|early growth response 1##BC073983|EGR1|1958|early growth response 1##M62829|EGR1|1958|early growth response 1##M80583|EGR1|1958|early growth response 1##BC041701|EGR1|1958|early growth response 1##EU832310|EGR1|1958|early growth response 1##EU832395|EGR1|1958|early growth response 1##AK298101|EGR1|1958|early growth response 1##AK301065|EGR1|1958|early growth response 1##AY562240|REEP2|51308|receptor accessory protein 2##AF251041|REEP2|51308|receptor accessory protein 2##X80916|ETF1|2107|eukaryotic translation termination factor 1##BT007374|ETF1|2107|eukaryotic translation termination factor 1##DQ890706|ETF1|2107|eukaryotic translation termination factor 1##DQ893890|ETF1|2107|eukaryotic translation termination factor 1##M75715|ETF1|2107|eukaryotic translation termination factor 1	0.994868	CTCF.p2:11:0.995
chr21	46518913	46519045	reg1014350.p1	10.062	+	TSC_hg19_v1_chr21_+_46494502 AY082339 BC030663 NM_001112 NM_001160230 NM_015833 NM_015834 AB194369 AB194370 AB194371 AB194372 AB194373 AF525422 AF533142 AY135659 U76420 U76421 U76422 BC065545 U82120	-24396	+	TSC_hg19_v1_chr21_+_46359968 CU679303	-159010	+	TSC_hg19_v1_chr21_+_46359920 AF391113 AF391114 BC009341 NM_058190	-159054	+	TSC_hg19_v1_chr21_+_46572480 FJ169506	53519	+	TSC_hg19_v1_chr21_-_46707808 BC064623 AJ575591 AL110285 AB023175 AJ302079 AJ302080 AY066015 AK294966 AK290732 AK298080 NM_015227 NM_133635	188822	-	TSC_hg19_v1_chr21_+_46707955 BC022830 BC033767	188996	+	AY082339|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC030663|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001112|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001160230|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015833|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015834|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194369|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194370|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194371|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194372|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194373|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF525422|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF533142|ADARB1|104|adenosine deaminase, RNA-specific, B1##AY135659|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76420|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76421|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76422|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC065545|ADARB1|104|adenosine deaminase, RNA-specific, B1##U82120|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF391113|FAM207A|85395|family with sequence similarity 207, member A##AF391114|FAM207A|85395|family with sequence similarity 207, member A##BC009341|FAM207A|85395|family with sequence similarity 207, member A##NM_058190|FAM207A|85395|family with sequence similarity 207, member A##FJ169506|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC064623|POFUT2|23275|protein O-fucosyltransferase 2##AJ575591|POFUT2|23275|protein O-fucosyltransferase 2##AL110285|POFUT2|23275|protein O-fucosyltransferase 2##AB023175|POFUT2|23275|protein O-fucosyltransferase 2##AJ302079|POFUT2|23275|protein O-fucosyltransferase 2##AJ302080|POFUT2|23275|protein O-fucosyltransferase 2##AY066015|POFUT2|23275|protein O-fucosyltransferase 2##AK294966|POFUT2|23275|protein O-fucosyltransferase 2##AK290732|POFUT2|23275|protein O-fucosyltransferase 2##AK298080|POFUT2|23275|protein O-fucosyltransferase 2##NM_015227|POFUT2|23275|protein O-fucosyltransferase 2##NM_133635|POFUT2|23275|protein O-fucosyltransferase 2##BC022830|LOC642852|642852|uncharacterized LOC642852##BC033767|LOC642852|642852|uncharacterized LOC642852	0.0	
chr2	85526018	85526127	reg1011760.p1	10.062	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	-165413	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	-327581	+	TSC_hg19_v1_chr2_+_85198299 NM_020122	-327788	+	TSC_hg19_v1_chr2_-_85555100 CU678967 EU176441 EU176775 X94333 BC028219	29000	-	AK223063 TSC_hg19_v1_chr2_-_85555113 AK126465 AK222829 BX640733 AK312479 BC008461 AF027515 AF027516 U62390	29058	-	TSC_hg19_v1_chr2_-_85555373 BX640868 NM_001206840 NM_001206841 NM_001206844 NM_006464	29316	-	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##EU176441|TGOLN2|10618|trans-golgi network protein 2##EU176775|TGOLN2|10618|trans-golgi network protein 2##X94333|TGOLN2|10618|trans-golgi network protein 2##BC028219|TGOLN2|10618|trans-golgi network protein 2##AK223063|TGOLN2|10618|trans-golgi network protein 2##AK126465|TGOLN2|10618|trans-golgi network protein 2##AK222829|TGOLN2|10618|trans-golgi network protein 2##BX640733|TGOLN2|10618|trans-golgi network protein 2##AK312479|TGOLN2|10618|trans-golgi network protein 2##BC008461|TGOLN2|10618|trans-golgi network protein 2##AF027515|TGOLN2|10618|trans-golgi network protein 2##AF027516|TGOLN2|10618|trans-golgi network protein 2##U62390|TGOLN2|10618|trans-golgi network protein 2##BX640868|TGOLN2|10618|trans-golgi network protein 2##NM_001206840|TGOLN2|10618|trans-golgi network protein 2##NM_001206841|TGOLN2|10618|trans-golgi network protein 2##NM_001206844|TGOLN2|10618|trans-golgi network protein 2##NM_006464|TGOLN2|10618|trans-golgi network protein 2	0.985056	CTCF.p2:10:0.985
chrX	51357373	51357483	reg1010395.p1	10.062	+	BC009942 TSC_hg19_v1_chrX_-_51239444 NM_018159	-117986	-	AB528198 AM392606 AK001490 TSC_hg19_v1_chrX_-_51239368	-118096	-	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	-281725	+	TSC_hg19_v1_chrX_+_51486493 NM_018094 AK225671 BC036077 AK298868 AK023155 AK001303	129083	+	NM_001005332 TSC_hg19_v1_chrX_+_51546171	188736	+	TSC_hg19_v1_chrX_+_51636723 NM_001005333 NM_006986 AF258554 AK298574 AK308706 BC014070 AK314053 AK074092 AF217963 AF300328	279275	+	BC009942|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018159|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AM392606|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK001490|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_018094|GSPT2|23708|G1 to S phase transition 2##BC036077|GSPT2|23708|G1 to S phase transition 2##AK298868|GSPT2|23708|G1 to S phase transition 2##AK023155|GSPT2|23708|G1 to S phase transition 2##AK001303|GSPT2|23708|G1 to S phase transition 2##NM_001005332|MAGED1|9500|melanoma antigen family D, 1##NM_001005333|MAGED1|9500|melanoma antigen family D, 1##NM_006986|MAGED1|9500|melanoma antigen family D, 1##AF258554|MAGED1|9500|melanoma antigen family D, 1##AK298574|MAGED1|9500|melanoma antigen family D, 1##AK308706|MAGED1|9500|melanoma antigen family D, 1##BC014070|MAGED1|9500|melanoma antigen family D, 1##AK314053|MAGED1|9500|melanoma antigen family D, 1##AK074092|MAGED1|9500|melanoma antigen family D, 1##AF217963|MAGED1|9500|melanoma antigen family D, 1##AF300328|MAGED1|9500|melanoma antigen family D, 1	0.867931	CTCF.p2:-6:0.868
chr2	205042767	205042871	reg1011504.p1	10.061	+	AK314985 AJ277832 NM_012092 BC028006 BC028210 AB023135 AF218312 CU688368 CU688430	-241325	+	BC070162 AF414120 NM_001037631 NM_005214 AK313732 BC069566 BC074893 BC074842 AB590653 AF486806 AY209009 AY792514 AY999702 DQ785106 L15006	-310232	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	-471420	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	367671	+	TSC_hg19_v1_chr2_+_205410560 AX765687 AX765741 AK056157	367775	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	367900	+	AK314985|ICOS|29851|inducible T-cell co-stimulator##AJ277832|ICOS|29851|inducible T-cell co-stimulator##NM_012092|ICOS|29851|inducible T-cell co-stimulator##BC028006|ICOS|29851|inducible T-cell co-stimulator##BC028210|ICOS|29851|inducible T-cell co-stimulator##AB023135|ICOS|29851|inducible T-cell co-stimulator##BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK056157|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)	0.634703	CTCF.p2:4:0.617
chr4	106587985	106588119	reg1011745.p1	10.061	+	AK000191 NM_001242729 NM_017700 BC105695	-114270	+	AM393754 AM393796 TSC_hg19_v1_chr4_-_106395220 AK294097 AL136655 AF161473 BC039462 BC008246 BC035569 BC012903 BC022803 AK289607 CU691190 AM393483 EU831414 EU831507 BC001065 BC021071 AB528841 AK297096 AK299125 AK299501 BC057219 AK000466 AB026722 AF217187 NM_006903 NM_176866 NM_176867 NM_176869	-192862	-	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	-520008	+	TSC_hg19_v1_chr4_-_106629819 BC014442 AK314939 NM_001142471 NM_020395	41789	-	TSC_hg19_v1_chr4_+_106629965 AK303547 BX648355 NM_024751 AK023335 AK225563	41921	+	AK292355 BC032942 NM_001031720	43915	+	AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_001242729|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##AM393754|PPA2|27068|pyrophosphatase (inorganic) 2##AM393796|PPA2|27068|pyrophosphatase (inorganic) 2##AK294097|PPA2|27068|pyrophosphatase (inorganic) 2##AL136655|PPA2|27068|pyrophosphatase (inorganic) 2##AF161473|PPA2|27068|pyrophosphatase (inorganic) 2##BC039462|PPA2|27068|pyrophosphatase (inorganic) 2##BC008246|PPA2|27068|pyrophosphatase (inorganic) 2##BC035569|PPA2|27068|pyrophosphatase (inorganic) 2##BC012903|PPA2|27068|pyrophosphatase (inorganic) 2##BC022803|PPA2|27068|pyrophosphatase (inorganic) 2##AK289607|PPA2|27068|pyrophosphatase (inorganic) 2##AM393483|PPA2|27068|pyrophosphatase (inorganic) 2##EU831414|PPA2|27068|pyrophosphatase (inorganic) 2##EU831507|PPA2|27068|pyrophosphatase (inorganic) 2##AK299125|PPA2|27068|pyrophosphatase (inorganic) 2##BC057219|PPA2|27068|pyrophosphatase (inorganic) 2##AK000466|PPA2|27068|pyrophosphatase (inorganic) 2##AB026722|PPA2|27068|pyrophosphatase (inorganic) 2##AF217187|PPA2|27068|pyrophosphatase (inorganic) 2##NM_006903|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176866|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176867|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176869|PPA2|27068|pyrophosphatase (inorganic) 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2##BC014442|INTS12|57117|integrator complex subunit 12##AK314939|INTS12|57117|integrator complex subunit 12##NM_001142471|INTS12|57117|integrator complex subunit 12##NM_020395|INTS12|57117|integrator complex subunit 12##AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	0.054599	
chr4	129730735	129730881	reg1011036.p2	10.061	+	AK131272 NM_006320	-520825	-	TSC_hg19_v1_chr4_-_129208969 BC092478	-521817	-	AK091741 AX747155 TSC_hg19_v1_chr4_-_129208964 BC016692	-521844	-	TSC_hg19_v1_chr4_+_129730875 NM_024900 NM_199320 AK027620 AF520952 AK304815 AK127326	62	+	TSC_hg19_v1_chr4_+_129732427 BC032376	1645	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	283782	-	AK131272|PGRMC2|10424|progesterone receptor membrane component 2##NM_006320|PGRMC2|10424|progesterone receptor membrane component 2##BC092478|PGRMC2|10424|progesterone receptor membrane component 2##AK091741|PGRMC2|10424|progesterone receptor membrane component 2##BC016692|PGRMC2|10424|progesterone receptor membrane component 2##NM_024900|PHF17|79960|PHD finger protein 17##NM_199320|PHF17|79960|PHD finger protein 17##AK027620|PHF17|79960|PHD finger protein 17##AF520952|PHF17|79960|PHD finger protein 17##AK304815|PHF17|79960|PHD finger protein 17##AK127326|PHF17|79960|PHD finger protein 17##BC032376|PHF17|79960|PHD finger protein 17##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1	0.219286	CTCF.p2:0:0.219
chr7	25891360	25891462	reg1010036.p2	10.061	+	AB040290 AF330057 AF440392 NM_022150	-623331	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-671540	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-726471	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	300522	+	TSC_hg19_v1_chr7_-_26232151 BX538099	340740	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	348930	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.995265	CTCF.p2:3:0.995
chr12	60202216	60202351	reg1012784.p1	10.060	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	-119144	+	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	-212366	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-887981	-	BC050347 NM_178539	2384300	-	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	2451901	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	2658296	+	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)	0.571827	CTCF.p2:12:0.572
chr19	11557642	11557787	reg1014176.p1	10.060	+	AB385574 AF144075 TSC_hg19_v1_chr19_+_11546995 BC013586	-10745	+	TSC_hg19_v1_chr19_+_11546486 AK290433	-11172	+	J03075 TSC_hg19_v1_chr19_+_11546469 Z36798 AK225390	-11246	+	BC080533 BC011875 TSC_hg19_v1_chr19_-_11564576	6858	-	TSC_hg19_v1_chr19_-_11565617 BC068222	7914	-	AY036909 L26405 D26158 BC014144 NM_001420 NM_032281 TSC_hg19_v1_chr19_-_11591862	33939	-	AF144075|PRKCSH|5589|protein kinase C substrate 80K-H##BC013586|PRKCSH|5589|protein kinase C substrate 80K-H##AK290433|PRKCSH|5589|protein kinase C substrate 80K-H##J03075|PRKCSH|5589|protein kinase C substrate 80K-H##Z36798|PRKCSH|5589|protein kinase C substrate 80K-H##AK225390|PRKCSH|5589|protein kinase C substrate 80K-H##BC080533|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC011875|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##AY036909|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##L26405|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##D26158|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC014144|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_001420|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_032281|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	0.997994	CTCF.p2:18:0.998
chr10	72108321	72108435	reg1007345.p1	10.059	+	TSC_hg19_v1_chr10_-_72083680 AL122117	-24680	-	NM_022146	-64929	-	AF108211 AB590125 AF217186 DQ893597 AB026723 TSC_hg19_v1_chr10_-_71993148 BC107882 AF154065 BC105034 BC105036 AF092439 AF119665 BC001022 BC061581 AK058193 NM_021129	-115225	-	BC024001 AY358318 NM_207119	33002	-	AK094734 TSC_hg19_v1_chr10_-_72142380 AK001613 AK001706 NM_018205 NM_018239	33986	-	NM_004096 TSC_hg19_v1_chr10_+_72163879	55492	+	AL122117|LRRC20|55222|leucine rich repeat containing 20##NM_022146|NPFFR1|64106|neuropeptide FF receptor 1##AF108211|PPA1|5464|pyrophosphatase (inorganic) 1##AF217186|PPA1|5464|pyrophosphatase (inorganic) 1##DQ893597|PPA1|5464|pyrophosphatase (inorganic) 1##AB026723|PPA1|5464|pyrophosphatase (inorganic) 1##BC107882|PPA1|5464|pyrophosphatase (inorganic) 1##AF154065|PPA1|5464|pyrophosphatase (inorganic) 1##BC105034|PPA1|5464|pyrophosphatase (inorganic) 1##BC105036|PPA1|5464|pyrophosphatase (inorganic) 1##AF092439|PPA1|5464|pyrophosphatase (inorganic) 1##AF119665|PPA1|5464|pyrophosphatase (inorganic) 1##BC001022|PPA1|5464|pyrophosphatase (inorganic) 1##BC061581|PPA1|5464|pyrophosphatase (inorganic) 1##AK058193|PPA1|5464|pyrophosphatase (inorganic) 1##NM_021129|PPA1|5464|pyrophosphatase (inorganic) 1##BC024001|LRRC20|55222|leucine rich repeat containing 20##AY358318|LRRC20|55222|leucine rich repeat containing 20##NM_207119|LRRC20|55222|leucine rich repeat containing 20##AK094734|LRRC20|55222|leucine rich repeat containing 20##AK001613|LRRC20|55222|leucine rich repeat containing 20##AK001706|LRRC20|55222|leucine rich repeat containing 20##NM_018205|LRRC20|55222|leucine rich repeat containing 20##NM_018239|LRRC20|55222|leucine rich repeat containing 20##NM_004096|EIF4EBP2|1979|eukaryotic translation initiation factor 4E binding protein 2	0.96086	CTCF.p2:22:0.961
chr12	29672666	29672782	reg1011194.p1	10.059	+	NM_183378	-22106	-	TSC_hg19_v1_chr12_-_29534109 AF183410 AF216751 AF302767 BC000887 BC107794 NM_016570	-138609	-	AK222799 TSC_hg19_v1_chr12_-_29534084 AL834128	-138641	-	TSC_hg19_v1_chr12_-_29936844 GQ865601 NM_001193451	264046	-	BC042083 NM_175861	264967	-	AK302260 NM_001190995	1157436	-	NM_183378|OVCH1|341350|ovochymase 1##AF183410|ERGIC2|51290|ERGIC and golgi 2##AF216751|ERGIC2|51290|ERGIC and golgi 2##AF302767|ERGIC2|51290|ERGIC and golgi 2##BC000887|ERGIC2|51290|ERGIC and golgi 2##BC107794|ERGIC2|51290|ERGIC and golgi 2##NM_016570|ERGIC2|51290|ERGIC and golgi 2##AK222799|ERGIC2|51290|ERGIC and golgi 2##AL834128|ERGIC2|51290|ERGIC and golgi 2##GQ865601|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_001193451|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##BC042083|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_175861|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##AK302260|IPO8|10526|importin 8##NM_001190995|IPO8|10526|importin 8	0.99893	CTCF.p2:-9:0.999
chr18	46941853	46941981	reg1012658.p1	10.059	+	AF010193 NM_001190821 NM_005904	-464837	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	-465150	-	AK301535 NM_001190822	-466215	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	45134	-	TSC_hg19_v1_chr18_-_47013575 AB097012	71648	-	TSC_hg19_v1_chr18_-_47013599 BC093004	71682	-	AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin##AB097012|C18orf32|497661|chromosome 18 open reading frame 32##BC093004|C18orf32|497661|chromosome 18 open reading frame 32	0.350934	CTCF.p2:20:0.351
chr4	177711156	177711290	reg1010809.p1	10.058	+	TSC_hg19_v1_chr4_-_177241652 AK096223	-469592	-	TSC_hg19_v1_chr4_+_177241122 AK026302 AL136660 AY359044 BC043490 BC053883 BC047290 CU690386 EU831652 EU831735	-470055	+	TSC_hg19_v1_chr4_+_177241098 NM_021928	-470170	+	AK313879 BC035212 U58111 X94216 U43142 BC063685 NM_005429 TSC_hg19_v1_chr4_-_177713956	2587	-	TSC_hg19_v1_chr4_+_178231006 NM_018248	519770	+	TSC_hg19_v1_chr4_+_178231027 AK001720 BC025954 AK307692 AB079071	519837	+	AK026302|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AL136660|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AY359044|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC043490|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC053883|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC047290|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831652|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831735|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##NM_021928|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AK313879|VEGFC|7424|vascular endothelial growth factor C##BC035212|VEGFC|7424|vascular endothelial growth factor C##U58111|VEGFC|7424|vascular endothelial growth factor C##X94216|VEGFC|7424|vascular endothelial growth factor C##U43142|VEGFC|7424|vascular endothelial growth factor C##BC063685|VEGFC|7424|vascular endothelial growth factor C##NM_005429|VEGFC|7424|vascular endothelial growth factor C##NM_018248|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK001720|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##BC025954|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK307692|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AB079071|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)	0.021401	
chr5	16550569	16550681	reg1010425.p1	10.058	+	NM_019000	-41519	-	TSC_hg19_v1_chr5_-_16465884 BC010545 BC008752 NM_033414 AY046059	-84749	-	NM_001102562	-370729	-	TSC_hg19_v1_chr5_-_16617097 BC053326 AK025808 NM_001034850	66500	-	TSC_hg19_v1_chr5_-_16738346 AK295736	187795	-	AK316138 TSC_hg19_v1_chr5_-_16742338	191712	-	NM_019000|FAM134B|54463|family with sequence similarity 134, member B##BC010545|ZNF622|90441|zinc finger protein 622##BC008752|ZNF622|90441|zinc finger protein 622##NM_033414|ZNF622|90441|zinc finger protein 622##AY046059|ZNF622|90441|zinc finger protein 622##NM_001102562|MARCH11|441061|membrane-associated ring finger (C3HC4) 11##BC053326|FAM134B|54463|family with sequence similarity 134, member B##AK025808|FAM134B|54463|family with sequence similarity 134, member B##NM_001034850|FAM134B|54463|family with sequence similarity 134, member B##AK295736|MYO10|4651|myosin X##AK316138|MYO10|4651|myosin X	0.997401	CTCF.p2:7:0.997
chr15	79320836	79320949	reg1009899.p2	10.056	+	NM_153815 S62035	-22891	-	TSC_hg19_v1_chr15_-_79237389 AL110099 BC002479 BC018821 AK309491 AK314698 D28436 AK130158 NM_004390	-83493	-	TSC_hg19_v1_chr15_-_79237350 AF426247 AF426248 CR456881 CU677980 DQ890683 DQ893772 AK295583 X16832	-83557	-	L26584 CU691844 AB385192 TSC_hg19_v1_chr15_-_79382954	62007	-	AK290135 TSC_hg19_v1_chr15_-_79383114 BC040275 NM_001145648 NM_002891	62256	-	AK127037 NM_001146341	254253	+	NM_153815|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##S62035|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AL110099|CTSH|1512|cathepsin H##BC002479|CTSH|1512|cathepsin H##BC018821|CTSH|1512|cathepsin H##AK309491|CTSH|1512|cathepsin H##AK314698|CTSH|1512|cathepsin H##D28436|CTSH|1512|cathepsin H##AK130158|CTSH|1512|cathepsin H##NM_004390|CTSH|1512|cathepsin H##AF426247|CTSH|1512|cathepsin H##AF426248|CTSH|1512|cathepsin H##CR456881|CTSH|1512|cathepsin H##DQ890683|CTSH|1512|cathepsin H##DQ893772|CTSH|1512|cathepsin H##X16832|CTSH|1512|cathepsin H##L26584|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK290135|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##BC040275|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_001145648|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_002891|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK127037|ANKRD34C|390616|ankyrin repeat domain 34C##NM_001146341|ANKRD34C|390616|ankyrin repeat domain 34C	0.486139	CTCF.p2:-5:0.486
chr19	51901497	51901599	reg1011289.p1	10.056	+	TSC_hg19_v1_chr19_-_51893838 BC085012 BC143997 BC043532 NM_001193623	-7723	-	BC074916 BC074917 BC126139 AF340019 BC069430 AF340020 NM_001161748 NM_030657	-10351	-	DQ895942 EU176419 BC015759 TSC_hg19_v1_chr19_-_51875909 NM_005601 S69115	-25669	-	TSC_hg19_v1_chr19_-_51920897 AK289900 AF310233 AY358337 AK290542 AK294185 AK303514 AK303717 BC101725 BC143497 BC143500 AF301007 AK292025 AK308982 AY032685 AF311905 NM_001171156 NM_001171157 NM_001171158 NM_001171159 NM_001171160 NM_001171161 NM_033130	19400	-	AF310234 AK290412 AF195092 AF223403 BC053319 AK290149 AK295589 NM_014442	60129	-	NM_001080405	78289	+	BC085012|LOC147646|147646|uncharacterized LOC147646##BC043532|LOC147646|147646|uncharacterized LOC147646##NM_001193623|LOC147646|147646|uncharacterized LOC147646##BC074916|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC074917|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC126139|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340019|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC069430|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340020|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_001161748|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_030657|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##DQ895942|NKG7|4818|natural killer cell group 7 sequence##EU176419|NKG7|4818|natural killer cell group 7 sequence##BC015759|NKG7|4818|natural killer cell group 7 sequence##NM_005601|NKG7|4818|natural killer cell group 7 sequence##S69115|NKG7|4818|natural killer cell group 7 sequence##AK289900|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF310233|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY358337|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK290542|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK294185|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303514|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303717|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC101725|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143497|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143500|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF301007|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK292025|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK308982|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY032685|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF311905|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171156|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171157|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171158|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171159|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171160|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171161|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_033130|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF310234|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290412|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF195092|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF223403|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##BC053319|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290149|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK295589|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_014442|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_001080405|CEACAM18|729767|carcinoembryonic antigen-related cell adhesion molecule 18	0.079869	
chr3	187037631	187037741	reg1004377.p3	10.055	+	BC106945 BC106946 TSC_hg19_v1_chr3_-_187009489 AK291686 AK129893 AK304334 AK300663 BX647237 AK291157 CR749615 BC039724 NM_001031849 NM_001879 NM_139125	-28047	-	BC065202 NM_153708 BC034744 DQ890807 DQ893962 AY562235	-122344	+	TSC_hg19_v1_chr3_-_186857285 L05096 AB063610 BC012328 NM_052969	-180430	-	BC013161 NM_022147 AJ251832 AY562238 DQ891046 DQ894225	48512	+	BC032625 AK312177 TSC_hg19_v1_chr3_-_187388181 NM_001048	350466	-	BC068081 NM_001004312	382658	-	BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1##NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1##BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1##AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1##L05096|RPL39L|116832|ribosomal protein L39-like##AB063610|RPL39L|116832|ribosomal protein L39-like##BC012328|RPL39L|116832|ribosomal protein L39-like##NM_052969|RPL39L|116832|ribosomal protein L39-like##BC013161|RTP4|64108|receptor (chemosensory) transporter protein 4##NM_022147|RTP4|64108|receptor (chemosensory) transporter protein 4##AJ251832|RTP4|64108|receptor (chemosensory) transporter protein 4##AY562238|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ891046|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ894225|RTP4|64108|receptor (chemosensory) transporter protein 4##BC032625|SST|6750|somatostatin##AK312177|SST|6750|somatostatin##NM_001048|SST|6750|somatostatin##BC068081|RTP2|344892|receptor (chemosensory) transporter protein 2##NM_001004312|RTP2|344892|receptor (chemosensory) transporter protein 2	0.0	
chr6	41274140	41274276	reg1012478.p1	10.055	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-19784	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-78140	+	AF534824 AK023755 BC125078 BC125079 AY358171 NM_024807	-105285	-	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	29358	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	239951	+	TSC_hg19_v1_chr6_+_41514342 BC052803	240129	+	DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##AF534824|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AK023755|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125078|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125079|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AY358171|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_024807|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4	0.989242	CTCF.p2:-12:0.989
chr11	22326030	22326134	reg1010933.p1	10.054	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	-111435	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	-1634890	+	NM_004211 AF085412	-1705135	+	AB032435 NM_020346	33584	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	321279	-	TSC_hg19_v1_chr11_+_22688156 NM_001143830 AK313734	362076	+	AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F##NM_001143830|GAS2|2620|growth arrest-specific 2##AK313734|GAS2|2620|growth arrest-specific 2	0.998136	CTCF.p2:6:0.998
chr1	176042792	176042937	reg1012267.p1	10.054	+	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	-330154	-	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-880834	-	AK127044 NM_022093	-1005871	+	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	133301	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	133454	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	133505	-	AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2	0.995767	CTCF.p2:8:0.996
chr13	95327263	95327382	reg1012747.p1	10.054	+	TSC_hg19_v1_chr13_+_95254110 NM_180989 BC033906 BC052243 AK126794	-73220	+	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	-78826	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	-78893	-	X65666 X71136 AB464716 NM_007084	36996	-	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	626390	-	NM_001160100 NM_182848 AK055855	758532	+	NM_180989|GPR180|160897|G protein-coupled receptor 180##BC033906|GPR180|160897|G protein-coupled receptor 180##BC052243|GPR180|160897|G protein-coupled receptor 180##AK126794|GPR180|160897|G protein-coupled receptor 180##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase##X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10	0.920151	CTCF.p2:-7:0.920
chr14	99855689	99855830	reg1014072.p1	10.053	+	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	-117869	-	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	-118142	-	AK098639 NM_182560	-677810	+	BC120967 BC120968 BC127624 BC127625 TSC_hg19_v1_chr14_-_99947104	91335	-	TSC_hg19_v1_chr14_-_99947132 BC066931 BX161441	91363	-	TSC_hg19_v1_chr14_-_99947170 BC037395	91420	-	AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##BC120967|SETD3|84193|SET domain containing 3##BC120968|SETD3|84193|SET domain containing 3##BC127624|SETD3|84193|SET domain containing 3##BC127625|SETD3|84193|SET domain containing 3##BC066931|SETD3|84193|SET domain containing 3##BX161441|SETD3|84193|SET domain containing 3##BC037395|SETD3|84193|SET domain containing 3	0.999046	CTCF.p2:-5:0.999
chr15	86273592	86273745	reg1013369.p1	10.053	+	AF127481 NM_144767	-53401	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	-349777	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-607350	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	64429	-	TSC_hg19_v1_chr15_-_86338178 NM_022480	64527	-	NM_152336	411573	+	NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1	0.981868	CTCF.p2:-1:0.982
chr19	49711681	49711782	reg1011007.p2	10.053	+	AK000048 TSC_hg19_v1_chr19_+_49669495	-42281	+	TSC_hg19_v1_chr19_+_49661048 AK074664 AF497623 AK292862 AY297044 AY297045 AY297046 AY046396 AJ575813 BC132727 BC144122 BC144123 AK295820	-50665	+	AK307897 NM_001195227 NM_017636 TSC_hg19_v1_chr19_+_49661029	-50718	+	BC034948 BC039336 NM_014037	116722	-	TSC_hg19_v1_chr19_+_49838662 AK301016	126927	+	TSC_hg19_v1_chr19_+_49838683 NM_001040031 NM_001774 AK301328	126947	+	AK000048|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AF497623|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK292862|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297044|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297045|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297046|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY046396|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AJ575813|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC132727|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144122|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144123|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK295820|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK307897|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_001195227|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_017636|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC034948|SLC6A16|28968|solute carrier family 6, member 16##NM_014037|SLC6A16|28968|solute carrier family 6, member 16##AK301016|CD37|951|CD37 molecule##NM_001040031|CD37|951|CD37 molecule##NM_001774|CD37|951|CD37 molecule##AK301328|CD37|951|CD37 molecule	0.830069	CTCF.p2:-2:0.830
chr2	67960909	67961041	reg1012960.p1	10.053	+	TSC_hg19_v1_chr2_+_67624467 NM_019002 AJ242682 BC033075 BC040001	-336493	+	TSC_hg19_v1_chr2_+_66666452 AK297109	-1294525	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	-1298135	+	BC016284 TSC_hg19_v1_chr2_-_68290140 X95592 BC009584 BC009589 BC005235 AK290451	329159	-	NM_001190263 NM_001190265 NM_006333 NM_173177 TSC_hg19_v1_chr2_-_68290160	329185	-	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	423659	-	NM_019002|ETAA1|54465|Ewing tumor-associated antigen 1##AJ242682|ETAA1|54465|Ewing tumor-associated antigen 1##BC033075|ETAA1|54465|Ewing tumor-associated antigen 1##BC040001|ETAA1|54465|Ewing tumor-associated antigen 1##AK297109|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##BC016284|C1D|10438|C1D nuclear receptor corepressor##X95592|C1D|10438|C1D nuclear receptor corepressor##BC009584|C1D|10438|C1D nuclear receptor corepressor##BC009589|C1D|10438|C1D nuclear receptor corepressor##BC005235|C1D|10438|C1D nuclear receptor corepressor##AK290451|C1D|10438|C1D nuclear receptor corepressor##NM_001190263|C1D|10438|C1D nuclear receptor corepressor##NM_001190265|C1D|10438|C1D nuclear receptor corepressor##NM_006333|C1D|10438|C1D nuclear receptor corepressor##NM_173177|C1D|10438|C1D nuclear receptor corepressor##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92	0.99804	CTCF.p2:-10:0.998
chr15	42763908	42764065	reg1013453.p1	10.052	+	AL831983 BC029366 BC070244 AF205632 BC058023 BC111396 NM_022473 TSC_hg19_v1_chr15_-_42749731 AK294529 AK091929 AX747260	-14249	-	BC107791 BC004883 NM_173089 NM_173090 BC067126 BC003521 BC100782 BC100783 BC100784 BC128605 BC007810	-66994	+	BC003169 NM_173088	-69399	+	TSC_hg19_v1_chr15_-_42783322 AK226132 BX649141 AK302735	19338	-	AK290152 AK315279 NM_003825 NM_130798	23494	+	U55936 TSC_hg19_v1_chr15_+_42787875 BC022890 BC003686 AK313161 BC000148 AJ011915	23881	+	AL831983|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC029366|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC070244|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AF205632|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC058023|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC111396|ZFP106|64397|zinc finger protein 106 homolog (mouse)##NM_022473|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AK294529|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AK091929|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC107791|CAPN3|825|calpain 3, (p94)##BC004883|CAPN3|825|calpain 3, (p94)##NM_173089|CAPN3|825|calpain 3, (p94)##NM_173090|CAPN3|825|calpain 3, (p94)##BC067126|CAPN3|825|calpain 3, (p94)##BC003521|CAPN3|825|calpain 3, (p94)##BC100782|CAPN3|825|calpain 3, (p94)##BC100783|CAPN3|825|calpain 3, (p94)##BC100784|CAPN3|825|calpain 3, (p94)##BC128605|CAPN3|825|calpain 3, (p94)##BC007810|CAPN3|825|calpain 3, (p94)##BC003169|CAPN3|825|calpain 3, (p94)##NM_173088|CAPN3|825|calpain 3, (p94)##AK226132|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AK302735|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AK290152|SNAP23|8773|synaptosomal-associated protein, 23kDa##AK315279|SNAP23|8773|synaptosomal-associated protein, 23kDa##NM_003825|SNAP23|8773|synaptosomal-associated protein, 23kDa##NM_130798|SNAP23|8773|synaptosomal-associated protein, 23kDa##U55936|SNAP23|8773|synaptosomal-associated protein, 23kDa##BC022890|SNAP23|8773|synaptosomal-associated protein, 23kDa##BC003686|SNAP23|8773|synaptosomal-associated protein, 23kDa##AK313161|SNAP23|8773|synaptosomal-associated protein, 23kDa##BC000148|SNAP23|8773|synaptosomal-associated protein, 23kDa##AJ011915|SNAP23|8773|synaptosomal-associated protein, 23kDa	0.42066	CTCF.p2:-21:0.421
chr16	24528443	24528585	reg1011508.p2	10.052	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	-260816	+	AK055453 TSC_hg19_v1_chr16_+_24267474	-261040	+	BC037899 NM_006539 AK095553	-261640	+	TSC_hg19_v1_chr16_+_24550886 NM_006910 NM_018703 NM_032626	22379	+	AF063596 BC101139 BC101140 BC101141 BC101142 BC114353 BC114354 BC118667 BC139830 BC029352 BC063524 AB112074 AB112075 BX648661 TSC_hg19_v1_chr16_+_24552052	23350	+	BC029649 TSC_hg19_v1_chr16_+_24567629	39114	+	BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006910|RBBP6|5930|retinoblastoma binding protein 6##NM_018703|RBBP6|5930|retinoblastoma binding protein 6##NM_032626|RBBP6|5930|retinoblastoma binding protein 6##AF063596|RBBP6|5930|retinoblastoma binding protein 6##BC101139|RBBP6|5930|retinoblastoma binding protein 6##BC101140|RBBP6|5930|retinoblastoma binding protein 6##BC101141|RBBP6|5930|retinoblastoma binding protein 6##BC101142|RBBP6|5930|retinoblastoma binding protein 6##BC114353|RBBP6|5930|retinoblastoma binding protein 6##BC114354|RBBP6|5930|retinoblastoma binding protein 6##BC118667|RBBP6|5930|retinoblastoma binding protein 6##BC139830|RBBP6|5930|retinoblastoma binding protein 6##BC029352|RBBP6|5930|retinoblastoma binding protein 6##BC063524|RBBP6|5930|retinoblastoma binding protein 6##AB112074|RBBP6|5930|retinoblastoma binding protein 6##AB112075|RBBP6|5930|retinoblastoma binding protein 6##BX648661|RBBP6|5930|retinoblastoma binding protein 6##BC029649|RBBP6|5930|retinoblastoma binding protein 6	1.661671	CTCF.p2:0:0.997	CTCF.p2:-86:0.664
chr8	61048800	61048907	reg1011909.p1	10.051	+	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	-1017181	-	NM_003580 TSC_hg19_v1_chr8_-_59572413	-1476442	-	BC041124 TSC_hg19_v1_chr8_-_59572386	-1476467	-	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	145068	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	380587	+	AK297576 TSC_hg19_v1_chr8_+_61429494	380641	+	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC041124|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family##AK297576|RAB2A|5862|RAB2A, member RAS oncogene family	0.040302	
chr9	120249928	120250040	reg1011636.p1	10.051	+	TSC_hg19_v1_chr9_-_120177336 BX649176	-72650	-	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	-72671	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	-800378	+	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	216480	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	216630	+	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	216703	+	BX649176|ASTN2|23245|astrotactin 2##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4	0.993626	CTCF.p2:-7:0.994
chr12	125251652	125251767	reg1011063.p1	10.050	+	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	-199634	-	TSC_hg19_v1_chr12_-_125002875 BC033087	-248850	-	AK126577 NM_181709	-478000	+	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	96596	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	96668	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	96764	-	AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1	0.999194	CTCF.p2:3:0.999
chr13	96672511	96672630	reg1012801.p1	10.050	+	TSC_hg19_v1_chr13_+_96329409 BC047936 BC020215 BC033823 AB384852 CU690538	-343112	+	TSC_hg19_v1_chr13_+_96329401 AK312861	-343169	+	AK292947 NM_006260 TSC_hg19_v1_chr13_+_96329392	-343176	+	CU688350 TSC_hg19_v1_chr13_-_96705666 BC125233 BC125234 AF227906 BC017759 BC067807 BC111021 AK001735 BC032302 NM_020121	33080	-	AF539426 NM_153456	70522	+	AK122639 NM_080818 AK313684	974042	-	BC047936|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##BC033823|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##AK312861|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##AK292947|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##NM_006260|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##BC125233|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC125234|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF227906|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC017759|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC067807|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC111021|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AK001735|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC032302|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##NM_020121|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##AK122639|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##NM_080818|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AK313684|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1	0.077681	
chr2	57948112	57948227	reg1010229.p1	10.050	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-1535260	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-1536403	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-1536964	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	325585	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	325819	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	520313	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.961123	CTCF.p2:-29:0.961
chr6	149886806	149886944	reg1014125.p1	10.050	+	BC020986 TSC_hg19_v1_chr6_-_149867195 AK315388 NM_139126	-19670	-	TSC_hg19_v1_chr6_-_149867172 AF357880 AK092069 AX747342 BX537536 BC107684	-19708	-	TSC_hg19_v1_chr6_-_149867153 CU676802 GQ129364 GQ129365 BC064134	-19731	-	TSC_hg19_v1_chr6_+_149887361 AY358952	500	+	TSC_hg19_v1_chr6_+_149887540 AK295690 BC014320 NM_138785 AK315729 AK289402 AK308844	636	+	TSC_hg19_v1_chr6_+_149887543 AK311061	669	+	BC020986|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AK315388|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##NM_139126|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AF357880|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AK092069|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BX537536|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC107684|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##GQ129364|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##GQ129365|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC064134|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AY358952|C6orf72|116254|chromosome 6 open reading frame 72##AK295690|C6orf72|116254|chromosome 6 open reading frame 72##BC014320|C6orf72|116254|chromosome 6 open reading frame 72##NM_138785|C6orf72|116254|chromosome 6 open reading frame 72##AK315729|C6orf72|116254|chromosome 6 open reading frame 72##AK289402|C6orf72|116254|chromosome 6 open reading frame 72##AK308844|C6orf72|116254|chromosome 6 open reading frame 72##AK311061|C6orf72|116254|chromosome 6 open reading frame 72	0.916788	CTCF.p2:3:0.917
chr2	175636408	175636530	reg1012022.p1	10.049	+	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	-7300	-	TSC_hg19_v1_chr2_+_175584527 DQ895855	-51891	+	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	-88715	-	AK055060 NM_001206602	75841	-	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	233544	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	396426	-	AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##DQ895855|H3F3A|3020|H3 histone, family 3A##BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2	0.999627	CTCF.p2:6:1.000
chr4	166386066	166386180	reg1010221.p1	10.049	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-85966	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-137268	+	NM_001161521 NM_001161522 AK294103 BX647776	-254945	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	408331	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	1769488	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	1769581	-	X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.753147	CTCF.p2:16:0.753
chr1	11002107	11002245	reg1010868.p1	10.048	+	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	-145471	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	-247625	-	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-467165	+	NM_001170754	39917	-	NM_007375 TSC_hg19_v1_chr1_+_11072715 AK299454 AK312416 BC001487 BC095435 BC071657 AL050265 AK222754 AK295920	70534	+	Y18282 TSC_hg19_v1_chr1_-_11107270 Y18283 X98400 Y09926 BC052299 BC067359 BC080556 Y18281 Y18284 AB008047	105043	-	DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127##NM_007375|TARDBP|23435|TAR DNA binding protein##AK299454|TARDBP|23435|TAR DNA binding protein##AK312416|TARDBP|23435|TAR DNA binding protein##BC001487|TARDBP|23435|TAR DNA binding protein##BC095435|TARDBP|23435|TAR DNA binding protein##BC071657|TARDBP|23435|TAR DNA binding protein##AL050265|TARDBP|23435|TAR DNA binding protein##AK222754|TARDBP|23435|TAR DNA binding protein##AK295920|TARDBP|23435|TAR DNA binding protein##Y18282|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18283|MASP2|10747|mannan-binding lectin serine peptidase 2##X98400|MASP2|10747|mannan-binding lectin serine peptidase 2##Y09926|MASP2|10747|mannan-binding lectin serine peptidase 2##BC052299|MASP2|10747|mannan-binding lectin serine peptidase 2##BC067359|MASP2|10747|mannan-binding lectin serine peptidase 2##BC080556|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18281|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18284|MASP2|10747|mannan-binding lectin serine peptidase 2##AB008047|MASP2|10747|mannan-binding lectin serine peptidase 2	0.93364	CTCF.p2:22:0.934
chr3	178684451	178684590	reg1010788.p1	10.045	+	AF209747 NM_005832	-407968	+	BC017825 NM_181361	-430297	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1769461	-	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	105045	-	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	105106	-	TSC_hg19_v1_chr3_+_178866144 NM_006218 AK292940	181718	+	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3##NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	0.301061	CTCF.p2:17:0.301
chr9	94438472	94438601	reg1012133.p2	10.045	+	TSC_hg19_v1_chr9_-_94186159 NM_005384	-252354	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	-252492	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	-314337	-	TSC_hg19_v1_chr9_-_94711095 BC033697	272592	-	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	273853	-	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	439128	-	NM_005384|NFIL3|4783|nuclear factor, interleukin 3 regulated##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1	0.450187	CTCF.p2:7:0.450
chr11	128027655	128027809	reg1005500.p1	10.044	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1154427	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1157007	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1157072	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	364231	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	364402	-	BX640634 NM_001143820	429720	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.937643	CTCF.p2:-11:0.938
chr12	55351956	55352095	reg1011442.p2	10.044	+	NM_058173 AF414087 AY359062 BC111421 AY651259	-103693	+	AY590150 AF144011 BC062682 BC069108 NM_053283 EF503687 EF503688 EF503689	-309820	-	CU686745 CU687522 AF238867 BC069317 NM_033277 BC062217	-323374	-	BC132732 BC132734 NM_001098815	23596	-	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	26477	-	NM_021191 AK314136	61745	+	NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1##AY590150|DCD|117159|dermcidin##AF144011|DCD|117159|dermcidin##BC062682|DCD|117159|dermcidin##BC069108|DCD|117159|dermcidin##NM_053283|DCD|117159|dermcidin##EF503687|DCD|117159|dermcidin##EF503688|DCD|117159|dermcidin##EF503689|DCD|117159|dermcidin##AF238867|LACRT|90070|lacritin##BC069317|LACRT|90070|lacritin##NM_033277|LACRT|90070|lacritin##BC062217|LACRT|90070|lacritin##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748##NM_021191|NEUROD4|58158|neurogenic differentiation 4##AK314136|NEUROD4|58158|neurogenic differentiation 4	0.978344	CTCF.p2:13:0.978
chr14	106465458	106465601	reg1002200.p1	10.044	+	TSC_hg19_v1_chr14_-_106453169 X17117 AK129517 AK130825 BC065733 X59702	-12359	-	U32200 U32268 U32334 U32335 U32336 U32488 U32490 U32599 U32608 U32609 U32947 U32948 U32950 U32963 U33799 U33801 AF028098 AF028106 AF028107 AF028114 AF028118 AY155550 AY155551 DQ454559 AF460797 AF460726 AF460724 AF460827 DQ454629 DQ454614 DQ454962 GQ232822 DQ454705 DQ523871 DQ454580 DQ523917 DQ523919 AY003767 DQ454466 DQ454560 DQ454565 DQ454682 EU099268 GU552685 AY003808 AY003836 DQ454469 DQ454795 DQ454971 DQ454985 DQ454452 DQ454571 DQ454944 DQ454960 DQ523896 EF583670 DQ454558 DQ454677 DQ454859 DQ454868 DQ455000 DQ523852 DQ523901 DQ454442 DQ523848 HQ704012 DQ100720 DQ454840 DQ454949 FJ840328 FJ873931 HM116191 GQ232887 AJ487491 AJ487492 AJ487493 AJ487498 AJ487506 AY003837 JF810257 AF069907 EF091912 EF175411 EF175427 EF583661 EU350413 EU433868 EU433869 EU433881 EU667601 EU667602 FJ694875 GQ232782 GQ232813 GQ232814 GQ232841 GQ232875 GQ232936 GQ232966 GQ232996 JF810256 GQ232768 EF441747 EF583659 AF103205 AF103114 EF566909 U86787 AF484410 HQ392886 JF894284 AM279467 AM279468 AM279469 AM279470 AM279471 AM279552 AM279555 AM279588 AM279641 AF308558 EU099276 GQ232957 AF408722 HM774202 EU099163 HM774025 HM774888 HM775065 JN110525 JN110528 JN111117 L04330 L04332 L04340 FJ385388 FJ385429 GQ504861 HM774080 HM774150 HM774407 HM774529 HM774561 HM774885 HQ704005 HQ704037 S73138 AF103263 AF082193 AJ008249 AY099261 AY206987 AY998750 DQ097896 EU099144 EU099173 EU099285 AF402947 X94432 AM183993 AY393351 EU099152 EU099269 EU099281 AF306372 AJ236544 AJ271548 AY193806 AY376076 AY376077 AY376090 AY393002 AY393003 AY393011 AY393020 AY393107 AY393113 AY393114 AY393116 AY393122 AY393139 AY393140 AY393227 AY393228 AY393241 AY393250 AY393254 AY393257 AY393259 AY393354 AY393357 AY393363 AY393377 AY393497 AY393500 AY393506 AY393509 AY393511 AY393533 AY393613 AY393616 AY393617 AY393633 AY393637 AY393653 AY393671 AY393676 EU099082 EU099119 EU099146 JF894280 HM995126 JN159306 HM995172 HM995197 HM995672 AY941929 DQ100708 DQ100722 DQ523939 DQ523940 DQ524004 DQ524046 DQ524048 DQ524070 DQ524135 HM994894 HM995065 HM995066 HM995070 HM995071 HM995072 HM995073 HM995088 HM995175 HM995192 HM995193 HM995194 HM995195 HM995196 HM995198 HM995281 HM995297 HM995349 HM995351 HM995538 HM995541 HM995542 HM995586 HM995587 HM995589 HM995591 HM995593 HM995610 HM995612 HM995613 HM996403 HM996541 AY971055 DQ926099 AB063667 AB063719 AB063917 AB066970 AB066981 AB067004 AB067009 AB067029 AB067072 AB067119 AB067126 AB067131 AB067253 AB363079 AB363093 AB363142 AB363149 AB363155 AF035019 AF035020 AF209860 AJ239337 AJ308447 AY033279 AY033280 AY376105 AY866614 AY941843 AY941858 AY941885 AY941903 AY941937 AY944702 AY944720 DQ065631 DQ065643 DQ065667 DQ065682 DQ065683 DQ065690 DQ065691 DQ926090 DQ926220 DQ926223 DQ926495 DQ926527 EF178106 EU549725 EU549730 FJ385284 FJ385396 HQ378330 JF894278 JF894282 JF894286 U07988 AB063662 AB063801 AB063829 AB063919 AB066925 AB066926 AB066963 AB067152 AB067166 AB067301 AB067307 AB067308 AB067329 AB067390 AB067393 AB363083 AB363143 AB363151 AB363161 AF006523 AF021941 AF021969 AF022007 AF035786 AF062092 AF062194 AF062195 AF062197 AF115113 AF115129 AF174043 AF174084 AF174094 AF174099 AF174107 AF174114 AF174125 AF174127 AF302820 AF455545 AF455547 AJ239344 AJ239371 AJ308466 AJ389196 AJ414005 AJ414014 AJ617573 AY033238 AY055487 AY345921 AY553642 AY553645 AY577308 AY577310 AY640563 AY866611 AY941911 AY941936 AY941945 AY971057 AY971071 DQ100662 DQ100680 DQ100786 DQ100789 DQ100800 DQ100816 DQ100914 DQ100919 DQ225091 DQ926031 DQ926058 DQ926059 DQ926135 DQ926486 DQ926543 FJ385320 FJ385387 GU570212 GU570215 GU570217 GU570269 HQ689739 JF806453 JF806454 JN158766 JN158852 JN159083 JN159282 JN159291 JN159293 JN159302 JN159305 JN159446 L14456 L23558 S73506 U00499 U00505 U00539 U00554 U00562 U00568 U00586 U71104 U85231 U85241 U86522 Z18846 Z34893 Z92888 AF035803 AY686906 AY686915 AY944693 AY944713 AY944721 DQ535285 DQ535302 DQ535348 DQ535375 DQ535476 EF177970 EF178023 EF178112 EF178115 EF178119 EF178135 HM995869 HM995871 AY957509 AY957510 FJ039793 AF062143 AF062151 AF062178 AF062179 AF062226 AF062256 AF062257 AF062262 AF062267 AF062271 AF067121 AF174005 AF174006 AF174009 AF174016 AF174031 AJ009732 M29468 U43758 U43762 Z14213 Z36889 Z46348 Z47223 Z80852 L23559 M24668 AJ010445 TSC_hg19_v1_chr14_-_106453155 BC080557 M18512	-12604	-	AF064915 AF267793 DQ454464 FN563613 FN563615 FN563617 FN563618 FN563619 FN563620 FN563733 FN563734 AF460793 AY393595 DQ523938 FN563493 FN563497 FN563498 FN563499 FN563500 FN563501 FN563502 FN563503 FN563504 FN563505 FN563506 FN563508 FN563532 FN563533 FN563534 FN563535 FN563536 FN563537 FN563539 FN563541 FN563542 FN563543 FN563544 FN563545 FN563546 FN563547 FN563548 FN563549 FN563550 FN563551 FN563552 FN563553 FN563554 FN563555 FN563556 FN563557 FN563558 FN563559 FN563560 FN563561 FN563562 FN563563 FN563564 FN563565 FN563566 FN563568 FN563569 FN563570 FN563601 FN563604 FN563605 FN563606 FN563607 FN563608 FN563610 FN563638 FN563639 FN563640 FN563641 FN563642 FN563643 FN563644 FN563645 FN563646 FN563647 FN563648 FN563649 FN563650 FN563651 FN563652 FN563653 FN563654 FN563655 FN563656 FN563657 FN563658 FN563659 FN563660 FN563661 FN563674 FN563675 FN563676 FN563677 FN563678 FN563679 FN563680 FN563681 FN563682 FN563683 FN563684 FN563685 FN563686 FN563687 FN563688 FN563689 FN563690 FN563691 FN563692 FN563693 FN563694 FN563695 FN563696 FN563697 FN563698 FN563727 FN563728 FN563729 FN563730 FN563731 FN563732 FN563741 FN563742 FN563743 FN563744 FN563745 FN563746 FN563747 FN563748 FN563749 FN563750 FN563751 FN563752 DQ454919 DQ454917 DQ454897 M71234 DQ454581 DQ454690 DQ454896 DQ454978 DQ454888 DQ454959 DQ454895 AF017457 M71225 M71226 DQ523915 L04771 AJ008198 AJ008199 DQ454824 S75894 EU099248 EF407841 JF810281 L21746 AF459631 S76902 AF343422 AF343424 M99372 L21747 DQ454899 AY393584 AY393323 AY393326 AY393327 AY393332 AY393473 AY393474 AY393476 AY393477 AY393479 AY393484 AY393486 AY393487 AY393488 AY393489 AY393490 AY393492 AY393574 AY393575 AY393576 AY393577 AY393578 AY393579 AY393580 AY393581 AY393582 AY393583 AY393585 AY393586 AY393587 AY393588 AY393589 AY393590 AY393591 AY393592 AY393593 AY393594 EU099263 L21734 X65920 DQ524023 AF103096 AF035040 DQ523994 L21733 L21738 L21729 AF015136 AF015137 AF015139 AF015140 AF015141 AF015144 AF015145 AF015146 JN110879 JN110884 JN110895 JN110931 L04333 L04338 L04341 L04762 L04763 L04768 L04769 L04770 L04772 L21726 L21727 L21730 L21731 L21732 L21735 L21736 L21737 L21739 L21740 L21741 L21742 L21744 L21745 L21748 M71217 M71219 M71223 M71227 M71228 M71229 M71230 M71233 U13195 U13196 U13197 U13198 U13199 U13200 U13201 U13202 FJ385406 AF082200 AF103769 AF361061 AF361062 AF361063 AF361064 AF361065 AF361066 AF361067 AF361068 AF361069 AF361070 AF361071 AF361072 U21271 DQ524163 AF166264 L38894 U21250 U21251 U21263 U21264 U21265 AJ239381 AJ007440 DQ523936 DQ523948 DQ523949 DQ523956 DQ523961 DQ523963 DQ523978 DQ523981 DQ523982 DQ523983 DQ523996 DQ523998 DQ524010 DQ524016 DQ524025 DQ524056 DQ524063 DQ524064 DQ524066 DQ524067 DQ524069 DQ524071 DQ524073 DQ524075 DQ524076 DQ524078 DQ524081 DQ524082 DQ524083 DQ524084 DQ524085 DQ524086 DQ524091 DQ524093 DQ524094 DQ524095 DQ524097 DQ524098 DQ524101 DQ524103 DQ524105 DQ524106 DQ524107 DQ524109 DQ524112 DQ524113 DQ524116 DQ524119 DQ524121 DQ524122 DQ524123 DQ524128 DQ524129 DQ524139 DQ524145 DQ524156 DQ524157 DQ926041 HM996448 AF129749 U00535 AB063677 AB063678 AB063679 AB063680 AB063686 AB063687 AB063697 AB063724 AB063750 AB063809 AB063891 AB063907 AB063912 AB063922 AB066943 AB066951 AB066952 AB067336 AB067338 AB067339 AB067340 AB067341 AB067342 AB067343 AB067344 AB067347 AB067349 AB067351 AB067353 AB067355 AB067357 AB067358 AB067361 AB067363 AB067364 AB067365 AB067366 AB067368 AB067369 AB067370 AB067373 AB067374 AB067376 AF013615 AF021985 AF035039 AF062123 AF062213 AF062284 AF078942 AF110149 AF174044 AJ308465 AM279625 AM279626 AM279627 AY033244 AY033245 AY033248 AY033249 AY033259 AY033260 AY033261 AY033269 AY033277 AY033278 AY270187 AY270188 AY270189 AY685266 AY941880 AY941881 AY941882 AY941890 AY941918 AY941924 AY941925 AY971140 DQ005277 DQ005294 DQ100886 DQ100891 DQ100997 DQ205179 DQ212525 DQ212526 DQ535278 DQ535313 DQ535323 DQ926075 DQ926092 DQ926147 DQ926280 DQ926430 DQ926455 DQ926581 DQ926593 EF178076 FJ385286 FJ490201 HQ378327 S71250 U00548 U00558 X67879 X67880 X67881 X67882 X67883 X67884 X67885 X67886 X67887 X67888 X67889 X67890 X67891 X67892 X67893 X67894 X67895 X67896 X67897 X67898 X67900 Z15110 M18510 Z14210 Z14207 Z14209 AY392985 AY392987 AY392988 AY392989 AY392990 AY392991 AY392992 AY392993 AY392994 AY392995 AY392997 AY392998 AY393098 AY393099 AY393100 AY393101 AY393102 AY393103 AY393104 AY393205 AY393206 AY393207 AY393208 AF062114 AF062137 AF062165 AF062219 AF062254 AF062273 AY452136 AY452137 L21957 X65916 X65917 X65918 Z14158 Z14159 Z14160 Z14161 Z14162 Z14163 Z14164 Z14184 Z14185 Z14186 Z14187 Z14188 Z14208 Z14211 Z14223 Z47236 BC089412 AY510105 M34029 BX648616 TSC_hg19_v1_chr14_-_106406109	-59658	-	GQ232825 GU552779 GU552687 GU552689 AY003848 FJ873924 FJ873955 GQ232946 HM116167 EF407847 EU350414 GQ232973 HM774711 EF407839 EF441752 U86801 AF211930 AM279559 HM774196 EU099286 EU146322 L04328 L04336 L04337 L33037 AY062319 FJ385375 FJ385408 FJ385414 FJ385418 FJ385419 HM774332 HM774418 HM774599 HM774606 AF103282 EU099067 EU099203 EU099287 EU146373 EU146380 FJ385394 EU099221 EU099283 AF306375 AF306376 AM259139 AY062320 AY392849 AY393007 AY393013 AY393111 AY393223 AY393232 AY393255 AY393368 AY393531 AY393610 AY393666 DQ100814 EU099253 HM996275 AY033262 AY033283 EF177964 FJ385299 AB022655 AB067168 AB067394 AF022000 AJ239360 AJ414006 AY553644 AY553647 AY885171 DQ926345 FJ039788 HM152522 M17750 M17751 U00569 U00580 AY686877 AY944696 DQ535282 DQ535443 DQ535465 DQ535484 EF178053 EF178130 FJ195468 FJ195471 HM152519 AF062134 AF062139 AF062140 AF062142 AF062221 L01278 X65883 X65885 X65887 X65888 X65891 X65892 X65893 Z47274 Z47275 Z47276 Z47277 Z80847 BC075840 TSC_hg19_v1_chr14_-_106471733 BX640724 AK097348 AK126543 AK304469 BX640847 S42403	6128	-	U49664 U32269 U32952 AY312398 AY312399 DQ454445 DQ454564 DQ454725 DQ524089 DQ454727 DQ454701 AF460719 AF460723 AF460756 AF460759 AF460771 AF460834 AF460823 AF460829 AF069906 DQ454534 DQ454674 DQ454797 DQ454818 GQ232799 DQ454530 DQ454764 Z30560 DQ454570 DQ454557 DQ454637 GU552723 GQ232831 Z30574 DQ454608 DQ454707 DQ454862 DQ454866 DQ454867 DQ454932 DQ523879 GQ232818 Z30544 Z30556 Z30563 Z30597 Z30672 DQ454537 DQ454600 Z30594 DQ454991 Z30548 DQ454533 DQ454966 DQ523863 DQ454575 DQ454591 DQ454675 DQ454975 DQ454989 HM116173 AY003860 DQ454688 EF091927 JF810280 EU099245 AY393163 EU099075 EU099102 AY393165 EU099215 AM183979 AY393166 AY393171 AY393177 AY393179 AY393180 AY393181 AY393183 AY393184 S74500 EU620003 AF103363 AF400158 AJ240597 JN110684 S74642 Z46847 FJ385345 FJ385356 FJ385426 GQ504882 AY062307 AF103159 AB274406 AB274412 AY422526 HM995333 L38895 Z92893 AY671484 AY671502 HM996309 DQ524158 DQ524152 AF398957 DQ523937 DQ523942 DQ523974 DQ523976 DQ524014 DQ524020 DQ524029 DQ524039 DQ524045 DQ524146 HM996397 AM233760 AM233767 AM233773 DQ926107 AF453266 AY376082 EF177971 HM995388 HM995482 HM995628 HM995630 HM995662 HM995740 HM995924 HM996182 HM996322 HM996354 HM996496 HM996514 HM996515 AB066901 AB066907 AB067286 AB067291 AB084084 AB453233 AF174055 AF174064 AF174066 AF174090 AF174108 AF174113 AF262203 AF262207 AJ244952 AJ244989 AJ245004 AJ245022 AJ245025 AJ245048 AJ245053 AJ245233 AJ245239 AJ245242 AJ389195 AJ556756 AJ556762 AJ576037 AJ579119 AJ579123 AJ579127 AJ579128 AJ579137 AJ579254 AJ579295 AJ579298 AJ579299 AY640493 AY640507 AY640551 AY670735 AY670737 AY670748 AY670776 AY670778 AY670786 AY670793 AY670807 AY670829 AY670832 AY670848 AY670852 AY670854 AY670861 AY670868 AY670869 AY670876 AY670877 AY670880 AY670887 AY670888 AY670889 AY670891 AY670901 AY670906 AY670908 AY670909 AY670917 AY670922 AY670927 AY670934 AY670936 AY670937 AY670938 AY670939 AY670941 AY670945 AY670955 AY670956 AY670957 AY670964 AY670968 AY670971 AY670979 AY670996 AY671042 AY671084 AY671098 AY671112 AY671127 AY671131 AY671137 AY671138 AY671237 AY671320 AY671325 AY671331 AY671336 AY671344 AY671367 AY671381 AY671385 AY671396 AY671397 AY671404 AY671405 AY671407 AY671408 AY671417 AY671437 AY671440 AY671442 AY671448 AY671463 AY671465 AY671467 AY671469 AY671493 AY671501 AY671506 AY671509 AY671516 AY671522 AY671524 AY671526 AY671542 AY671546 AY671547 AY671550 AY671554 AY671558 AY671559 AY671569 AY671571 AY671584 AY671588 AY671590 AY671594 AY671604 AY671607 AY671608 AY671609 AY671610 AY671611 AY671613 AY671615 AY671616 AY671621 AY671622 AY671628 AY671633 AY671636 AY671643 AY671646 AY671647 AY671649 AY671655 AY671657 AY671662 AY671667 AY671669 AY671679 AY671680 AY671683 AY671687 AY671695 AY671747 AY671768 AY671777 AY671778 AY685295 AY685305 AY685312 AY781854 AY781863 AY971061 AY971111 AY971119 DQ005266 DQ005272 DQ005280 DQ100845 DQ100896 DQ205163 DQ926078 FJ039782 FJ385308 FJ385314 FJ385395 GU570393 GU570394 HM152486 L12191 L12196 L25294 S55101 S67077 U85239 Z18320 Z70635 Z70659 AY686879 DQ535276 DQ535307 DQ535328 EF177962 FJ195498 FJ195512 HM996178 X67910 AY392946 AY392947 AY392948 AY392956 AY671265 AY671019 AY671039 AY671041 AY671259 AY671249 AY671147 AY671154 AY671178 AY671210 AY671260 AY671261 AF013620 AF062200 AF062203 AF062207 AF062220 AF062245 AF062258 AF062264 AF062272 AF174013 AF174036 AF381602 AF381610 AM233776 AM233818 AY670746 AY671066 AY671181 AY671188 AY671211 AY671693 AY671738 M26997 M99609 X52110 Z11958 Z47221 Z75400 Z75402 BC073766 J00231 BC063384 BC011857 CU680082 CU687682 Z14196 Z14194 TSC_hg19_v1_chr14_-_106478575 Z14182	12824	-	AF267814 AF267818 AY393025 M34025 DQ454568 FJ874017 FJ840306 FJ840308 FJ840341 FJ840342 FJ840347 FJ840348 FJ840351 FJ840353 FJ840354 FJ840356 FJ840361 FJ840364 FJ840365 FJ840368 FJ840373 FJ840378 FJ840401 FJ840402 FJ840404 FJ873822 FJ873825 FJ873827 FJ873829 FJ873831 FJ873832 FJ873834 FJ873841 FJ873843 FJ873845 FJ873851 FJ873852 FJ873854 FJ873856 FJ873879 FJ873880 FJ873882 FJ873889 FJ873891 FJ873893 FJ873896 FJ873900 FJ873905 FJ873906 FJ873907 FJ873908 FJ873917 FJ873919 FJ873920 FJ873927 FJ873937 FJ873944 FJ873960 FJ873973 FJ873980 FJ873983 FJ874001 FJ874004 FJ874006 FJ874007 FJ874011 FJ874012 FJ874016 FJ874021 FJ874022 FJ874032 FJ874033 FJ874035 FJ874041 FJ874060 FJ874071 FJ874092 HM116099 HM116103 HM116104 HM116108 HM116110 HM116111 HM116112 HM116124 HM116125 HM116126 HM116127 HM116132 HM116134 HM116142 HM116150 HM116151 HM116156 HM116157 HM116164 HM116171 HM116176 HM116183 HM116185 HM116186 HM116188 HM116194 HM116200 HM116203 HM116204 HM116207 HM116210 HM116211 HM116212 HM116215 HM116218 HM116224 GU552693 GQ232960 GQ232962 GQ232978 AJ008188 S75886 AJ487496 AY003819 AY994082 EU090242 EU667603 JF810259 AY393312 AY392883 AY392887 AY392891 AY392897 AY392900 AY392903 AY393023 AY393026 AY393027 AY393028 AY393029 AY393030 AY393031 AY393032 AY393033 AY393034 AY393035 AY393036 AY393037 AY393038 AY393040 AY393041 AY393042 AY393043 AY393044 AY393045 AY393046 AY393048 AY393049 AY393050 AY393051 AY393276 AY393277 AY393278 AY393283 AY393285 AY393288 AY393289 AY393290 AY393292 AY393294 AY393298 AY393299 AY393303 AY393304 AY393307 AY393310 AY393311 AY393382 AY393386 AY393390 AY393391 AY393392 AY393393 AY393406 AY393413 AY393416 AY393417 AY393418 AY393419 AY393421 AY393423 AY393435 AY393440 AY393452 AY393554 AY393555 AY393557 AY393558 AY393559 AY393564 AY393565 EU099064 EU099181 EU099246 DQ100785 JN110964 AY955064 JN110468 JN110515 JN110517 JN110539 JN110572 JN110594 JN110907 JN110984 JN110994 JN111158 JN111166 JN111205 AY062324 AM279571 AY866601 AY866658 AM279525 AM279573 AY866680 DQ100676 DQ100927 DQ100946 AM279595 AM279596 AM279599 AM279600 DQ100868 DQ926119 DQ926440 DQ926554 DQ926566 HM995527 HM995209 HM995210 HM995212 HM995214 HM995215 HM995376 HM995377 HM995380 HM995398 HM995401 HM995473 HM995528 HM995531 HM995597 HM995599 HM995814 HM995819 AB063834 AB066852 AB066861 AB066862 AB066864 AB066865 AB066866 AB066868 AB066869 AB066870 AB066871 AB066873 AB066874 AB066878 AB067185 AB067189 AB067221 AB067222 AB067223 AB067226 AB067228 AB067229 AB067231 AB067232 AB363096 AB363107 AB374193 AB374196 AB374197 AB374204 AF035018 AF062155 AF062255 AF129754 AF174046 AF174061 AF174070 AF174071 AF455551 AF460966 AY055482 AY345923 AY866550 AY866584 AY866603 AY866625 AY866961 AY941941 DQ205143 DQ490734 DQ490735 DQ490736 DQ923046 DQ926138 DQ926180 DQ926226 DQ926362 DQ926376 DQ926412 DQ926456 DQ926482 DQ926490 DQ926499 DQ926558 DQ926576 DQ926582 DQ926586 DQ926588 DQ926592 DQ926605 DQ926606 DQ926610 DQ926650 FR820874 GU570276 GU570278 GU570279 GU570280 HM152514 HQ378331 HQ378364 HQ378373 S73953 U00545 U00552 U00555 X64147 M90808 AY393141 AY393143 AY393144 AY393146 AY393147 AY393149 AY393150 X69861 AF062130 AF062268 AF062282 AY172958 S67984 X81695 Z47235 Z47237 Z47243 AK301335 TSC_hg19_v1_chr14_-_106494595 AK057617 BC092449	28853	-	AK129517|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC080557|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089412|IGHM|3507|immunoglobulin heavy constant mu##BC075840|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640724|IGHM|3507|immunoglobulin heavy constant mu##AK097348|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK126543|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640847|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073766|IGHV4-31|28396|immunoglobulin heavy variable 4-31##J00231|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC063384|IGHD|3495|immunoglobulin heavy constant delta##BC011857|IGHM|3507|immunoglobulin heavy constant mu##AK301335|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC092449|IGHA1|3493|immunoglobulin heavy constant alpha 1	2.988547	CTCF.p2:-1:0.999	CTCF.p2:37:0.264	CTCF.p2:56:0.575	CTCF.p2:96:0.998
chr8	38242616	38242745	reg1011859.p1	10.044	+	TSC_hg19_v1_chr8_-_38239790 AF332468 AF332469 NM_017778 NM_023034 BC000030	-2884	-	AK022560 TSC_hg19_v1_chr8_-_38239782 AJ295990 AJ295991 AJ295992 BC062631 BC012059 AF255649 BC007787	-3054	-	TSC_hg19_v1_chr8_-_38239339 BC101717 BC113469 BC143510 BC115006 BC115007	-3327	-	NM_001199659 NM_144652 TSC_hg19_v1_chr8_+_38244011 AK289944 AK058138 AK302317 BC069830 AL832241 AY173945 AK302474	1330	+	BC024250 NM_001199660	1967	+	AK291754 AK309947 AK292470 NM_001174065 NM_001174066 NM_001174067	82621	-	AF332468|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##AF332469|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##NM_017778|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##NM_023034|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##BC000030|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##AK022560|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##AJ295990|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##AJ295991|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##AJ295992|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##BC062631|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##BC012059|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##AF255649|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##BC007787|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##BC101717|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##BC113469|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##BC143510|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##BC115006|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##BC115007|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##NM_001199659|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##NM_144652|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK289944|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK058138|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK302317|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##BC069830|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AL832241|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AY173945|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK302474|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##BC024250|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##NM_001199660|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK291754|FGFR1|2260|fibroblast growth factor receptor 1##AK309947|FGFR1|2260|fibroblast growth factor receptor 1##AK292470|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1	0.204323	CTCF.p2:-11:0.204
chr3	72988135	72988276	reg1011198.p2	10.043	+	TSC_hg19_v1_chr3_+_72937356 NM_001080393	-50929	+	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	-90613	-	BC017274 TSC_hg19_v1_chr3_-_72897575	-90630	-	TSC_hg19_v1_chr3_+_73045961 AK289901 BC100281	57752	+	TSC_hg19_v1_chr3_+_73045984 BC110889	57786	+	TSC_hg19_v1_chr3_+_73046081 AF327345 NM_174907 BC128136 BC128137	57915	+	NM_001080393|GXYLT2|727936|glucoside xylosyltransferase 2##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	0.985493	CTCF.p2:-5:0.985
chr4	79533694	79533820	reg1011363.p2	10.043	+	TSC_hg19_v1_chr4_+_79472911 BC000871 AK313945	-60849	+	NM_005139 TSC_hg19_v1_chr4_+_79472790	-60987	+	BC006366 TSC_hg19_v1_chr4_-_79103287	-430472	-	TSC_hg19_v1_chr4_+_79697501 AL137661	163726	+	NM_017593 NM_198892 TSC_hg19_v1_chr4_+_79697532	163779	+	TSC_hg19_v1_chr4_+_79697552 AK292147 BC036021 DQ890994	163866	+	BC000871|ANXA3|306|annexin A3##AK313945|ANXA3|306|annexin A3##NM_005139|ANXA3|306|annexin A3##AL137661|BMP2K|55589|BMP2 inducible kinase##NM_017593|BMP2K|55589|BMP2 inducible kinase##NM_198892|BMP2K|55589|BMP2 inducible kinase##AK292147|BMP2K|55589|BMP2 inducible kinase##BC036021|BMP2K|55589|BMP2 inducible kinase##DQ890994|BMP2K|55589|BMP2 inducible kinase	0.294527	CTCF.p2:-8:0.295
chr8	124936977	124937112	reg1012031.p1	10.042	+	AB196633 NM_001039112	-72818	+	TSC_hg19_v1_chr8_+_124780758 DQ228141 NM_144963 BC144630	-156231	+	TSC_hg19_v1_chr8_+_124780681 AK300603 BC030520	-156354	+	BC101502 BC101506 AK057332 TSC_hg19_v1_chr8_-_125183771	246694	-	TSC_hg19_v1_chr8_-_125384925 BC041379 NM_194291	447908	-	TSC_hg19_v1_chr8_+_125463060 NM_017956 AK225083 AK000779 AK222727 BC011713 BC003057	526028	+	AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)##DQ228141|FAM91A1|157769|family with sequence similarity 91, member A1##NM_144963|FAM91A1|157769|family with sequence similarity 91, member A1##BC144630|FAM91A1|157769|family with sequence similarity 91, member A1##AK300603|FAM91A1|157769|family with sequence similarity 91, member A1##BC030520|FAM91A1|157769|family with sequence similarity 91, member A1##BC101502|C8orf78|157376|chromosome 8 open reading frame 78##BC101506|C8orf78|157376|chromosome 8 open reading frame 78##AK057332|C8orf78|157376|chromosome 8 open reading frame 78##BC041379|TMEM65|157378|transmembrane protein 65##NM_194291|TMEM65|157378|transmembrane protein 65##NM_017956|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK225083|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK000779|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK222727|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC011713|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC003057|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)	0.0	
chr3	139656674	139656787	reg1011577.p1	10.041	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-2478	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-2712	+	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	-259902	-	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	740229	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	1004037	+	TSC_hg19_v1_chr3_+_140770412 BC051354	1113748	+	AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.296967	CTCF.p2:-14:0.297
chr10	119517611	119517707	reg1009536.p2	10.040	+	TSC_hg19_v1_chr10_+_119302713 AB463605	-214916	+	AF301598 NM_001165924 NM_004098	-215704	+	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	-215743	-	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	288385	-	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	288771	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	584165	-	AF301598|EMX2|2018|empty spiracles homeobox 2##NM_001165924|EMX2|2018|empty spiracles homeobox 2##NM_004098|EMX2|2018|empty spiracles homeobox 2##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A	0.998122	CTCF.p2:13:0.998
chr10	28917170	28917294	reg1010881.p2	10.040	+	TSC_hg19_v1_chr10_+_28878692 BC010356	-38526	+	AB590052 AK297460 TSC_hg19_v1_chr10_+_28822585	-94686	+	AK290174 TSC_hg19_v1_chr10_+_28822429 AK223600 BC004258	-94799	+	TSC_hg19_v1_chr10_+_28966451 NM_012342 AK290639 BC019252 AK223065 U23070	49215	+	NM_032517 BC021730 AY358694	660784	+	TSC_hg19_v1_chr10_+_29698475 BC066966 BC050354	781237	+	BC010356|WAC|51322|WW domain containing adaptor with coiled-coil##AK297460|WAC|51322|WW domain containing adaptor with coiled-coil##AK290174|WAC|51322|WW domain containing adaptor with coiled-coil##AK223600|WAC|51322|WW domain containing adaptor with coiled-coil##BC004258|WAC|51322|WW domain containing adaptor with coiled-coil##NM_012342|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK290639|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC019252|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK223065|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##U23070|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##NM_032517|LYZL1|84569|lysozyme-like 1##BC021730|LYZL1|84569|lysozyme-like 1##AY358694|LYZL1|84569|lysozyme-like 1##BC066966|LOC387647|387647|patched domain containing 3 pseudogene##BC050354|LOC387647|387647|patched domain containing 3 pseudogene	0.993023	CTCF.p2:5:0.993
chr12	118620192	118620322	reg1012382.p3	10.040	+	TSC_hg19_v1_chr12_+_118573963 AB528565 X85033	-46279	+	TSC_hg19_v1_chr12_+_118573928 BC008714 AK311927 D16111 BC018799 AK308056 BC031102 AK299414 HM131449	-46334	+	TSC_hg19_v1_chr12_+_118573907 NM_002567 BC017396 X75252 AK226006	-46382	+	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	190371	-	TSC_hg19_v1_chr12_-_118810713 NM_016281	190473	-	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	194145	+	X85033|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC008714|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK311927|PEBP1|5037|phosphatidylethanolamine binding protein 1##D16111|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC018799|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK308056|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC031102|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK299414|PEBP1|5037|phosphatidylethanolamine binding protein 1##HM131449|PEBP1|5037|phosphatidylethanolamine binding protein 1##NM_002567|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC017396|PEBP1|5037|phosphatidylethanolamine binding protein 1##X75252|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK226006|PEBP1|5037|phosphatidylethanolamine binding protein 1##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##NM_016281|TAOK3|51347|TAO kinase 3##BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)	0.99804	CTCF.p2:10:0.998
chr3	136829373	136829487	reg1012744.p1	10.040	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-152600	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-180093	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	-248338	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	653717	+	AK098474 NM_001002026 AF349452	888249	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	899573	+	AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18	0.0	
chr4	47841531	47841642	reg1010845.p2	10.039	+	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	-1496	-	TSC_hg19_v1_chr4_+_47708352 D28417	-133232	+	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	-354256	+	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	75009	-	M84741 NM_001142564 S42457	141903	-	AK292021 NM_000087	173374	-	AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D##AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1##S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1##AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1	0.99835	CTCF.p2:-4:0.998
chr6	132619616	132619709	reg1009906.p1	10.039	+	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	-347248	-	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-490401	+	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	-490501	+	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	102954	-	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	214588	-	BC069083 NM_175057 AY183469	239765	+	BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7##BC069083|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##NM_175057|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183469|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)	0.878826	CTCF.p2:9:0.879
chr9	115873802	115873925	reg1010310.p1	10.039	+	AK301275 HQ258583 AF022158 NM_003408 BC126390 BC144145	-54861	-	AK095843 NM_001101338	-99392	-	CU690566 BC048285 AK314414 AK055571 AF242557 NM_033051	-220787	-	TSC_hg19_v1_chr9_+_115913250 NM_001860	39378	+	AX810714 TSC_hg19_v1_chr9_+_115913291 AK057903 AK295544 BC026252 U83461	39420	+	AB385371 TSC_hg19_v1_chr9_-_115983577 AK307498 AB014574 BC009609 AK303074 NM_015258	109720	-	AK301275|ZFP37|7539|zinc finger protein 37 homolog (mouse)##HQ258583|ZFP37|7539|zinc finger protein 37 homolog (mouse)##AF022158|ZFP37|7539|zinc finger protein 37 homolog (mouse)##NM_003408|ZFP37|7539|zinc finger protein 37 homolog (mouse)##BC126390|ZFP37|7539|zinc finger protein 37 homolog (mouse)##BC144145|ZFP37|7539|zinc finger protein 37 homolog (mouse)##AK095843|ZNF883|169834|zinc finger protein 883##NM_001101338|ZNF883|169834|zinc finger protein 883##BC048285|SLC46A2|57864|solute carrier family 46, member 2##AK314414|SLC46A2|57864|solute carrier family 46, member 2##AK055571|SLC46A2|57864|solute carrier family 46, member 2##AF242557|SLC46A2|57864|solute carrier family 46, member 2##NM_033051|SLC46A2|57864|solute carrier family 46, member 2##NM_001860|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2##AK057903|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2##AK295544|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2##BC026252|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2##U83461|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2##AK307498|FKBP15|23307|FK506 binding protein 15, 133kDa##AB014574|FKBP15|23307|FK506 binding protein 15, 133kDa##BC009609|FKBP15|23307|FK506 binding protein 15, 133kDa##AK303074|FKBP15|23307|FK506 binding protein 15, 133kDa##NM_015258|FKBP15|23307|FK506 binding protein 15, 133kDa	1.019598	CTCF.p2:-29:0.999
chr8	75278460	75278583	reg1010930.p1	10.038	+	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	-15831	+	BX537756 BC139832 BC098299 BC098314 BC099736 BC113856 BC114464 NM_020647 BC140875 BC140876	-44993	-	NM_001195797 NM_015364 BC020690 AF168121 AB590737 AB446498	-374901	+	CR749657 NM_015886	458250	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	618388	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	1041667	+	AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BX537756|JPH1|56704|junctophilin 1##BC139832|JPH1|56704|junctophilin 1##BC098299|JPH1|56704|junctophilin 1##BC098314|JPH1|56704|junctophilin 1##BC099736|JPH1|56704|junctophilin 1##BC113856|JPH1|56704|junctophilin 1##BC114464|JPH1|56704|junctophilin 1##NM_020647|JPH1|56704|junctophilin 1##BC140875|JPH1|56704|junctophilin 1##BC140876|JPH1|56704|junctophilin 1##NM_001195797|LY96|23643|lymphocyte antigen 96##NM_015364|LY96|23643|lymphocyte antigen 96##BC020690|LY96|23643|lymphocyte antigen 96##AF168121|LY96|23643|lymphocyte antigen 96##AB446498|LY96|23643|lymphocyte antigen 96##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma	0.982794	CTCF.p2:-1:0.983
chr13	34505687	34505809	reg1010193.p1	10.037	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	-113464	+	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	-113521	+	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	-254813	-	TSC_hg19_v1_chr13_+_35516429 NM_015678 AF467288	1010710	+	BC028170 AB593021 TSC_hg19_v1_chr13_-_36050827 AB593022 AK313185 AB073388 NM_005584	1545048	-	AK294737 NM_001204197 TSC_hg19_v1_chr13_+_36050945 AK315939	1545177	+	AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_015678|NBEA|26960|neurobeachin##AF467288|NBEA|26960|neurobeachin##BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK294737|NBEA|26960|neurobeachin##NM_001204197|NBEA|26960|neurobeachin##AK315939|NBEA|26960|neurobeachin	0.984988	CTCF.p2:-5:0.985
chr16	10408800	10408967	reg1012672.p2	10.037	+	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	-132206	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	-132695	-	BC143273 U09002 NM_001134408	-133050	-	AK093414 AX748112 TSC_hg19_v1_chr16_+_10479917 AK296565 AK299040 BC033891 BC041882	71034	+	NM_024997 BC137079 BC144468	113857	+	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	265607	-	NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2	0.513885	CTCF.p2:-15:0.514
chr18	42475511	42475653	reg1012743.p1	10.037	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-214714	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-215468	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1618153	-	NM_001242692 AK292422	317370	+	AF349446 NM_007163	719183	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	828522	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.199643	
chr1	214506407	214506520	reg1010627.p1	10.036	+	TSC_hg19_v1_chr1_+_214454550 BC068511 BC049367 BC094747 BC057793 NM_020197 AF226053 BC098133 BC098276 BC098305 BC098335 BC028104 AK313868 AB590916 BC039890	-52026	+	BC024201 NM_002763	-344604	+	AK298182 TSC_hg19_v1_chr1_+_214161296 U44060	-345174	+	X82676 TSC_hg19_v1_chr1_-_214724620 BC017300 AK090596	218144	-	TSC_hg19_v1_chr1_-_214724946 AK298120 BX538306 AK291641	218436	-	TSC_hg19_v1_chr1_-_214724977 NM_005401	218535	-	BC068511|SMYD2|56950|SET and MYND domain containing 2##BC049367|SMYD2|56950|SET and MYND domain containing 2##BC094747|SMYD2|56950|SET and MYND domain containing 2##BC057793|SMYD2|56950|SET and MYND domain containing 2##NM_020197|SMYD2|56950|SET and MYND domain containing 2##AF226053|SMYD2|56950|SET and MYND domain containing 2##BC098133|SMYD2|56950|SET and MYND domain containing 2##BC098276|SMYD2|56950|SET and MYND domain containing 2##BC098305|SMYD2|56950|SET and MYND domain containing 2##BC098335|SMYD2|56950|SET and MYND domain containing 2##BC028104|SMYD2|56950|SET and MYND domain containing 2##AK313868|SMYD2|56950|SET and MYND domain containing 2##BC039890|SMYD2|56950|SET and MYND domain containing 2##BC024201|PROX1|5629|prospero homeobox 1##NM_002763|PROX1|5629|prospero homeobox 1##AK298182|PROX1|5629|prospero homeobox 1##U44060|PROX1|5629|prospero homeobox 1##X82676|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##BC017300|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK090596|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK298120|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK291641|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##NM_005401|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14	0.994936	CTCF.p2:-5:0.995
chr16	25236698	25236808	reg1011494.p2	10.036	+	AB013456 AF067797 NM_001169 AK222975 AK222964	-8453	+	TSC_hg19_v1_chr16_+_25123102 AK025884 AK225271 AK291885 AK314409 BC014217 AF037601 CU674610 AL137283 CU676933	-113556	+	TSC_hg19_v1_chr16_+_25123062 NM_001032391 NM_016309 AK223364 AF151826 BC001214	-113692	+	BX648785 AK131342 NM_001012981 AK302399	32106	-	TSC_hg19_v1_chr16_-_25269141 AK303472	32452	-	AF105378 NM_006040	466593	+	AB013456|AQP8|343|aquaporin 8##AF067797|AQP8|343|aquaporin 8##NM_001169|AQP8|343|aquaporin 8##AK222975|AQP8|343|aquaporin 8##AK222964|AQP8|343|aquaporin 8##AK025884|LCMT1|51451|leucine carboxyl methyltransferase 1##AK225271|LCMT1|51451|leucine carboxyl methyltransferase 1##AK291885|LCMT1|51451|leucine carboxyl methyltransferase 1##AK314409|LCMT1|51451|leucine carboxyl methyltransferase 1##BC014217|LCMT1|51451|leucine carboxyl methyltransferase 1##AF037601|LCMT1|51451|leucine carboxyl methyltransferase 1##AL137283|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_001032391|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_016309|LCMT1|51451|leucine carboxyl methyltransferase 1##AK223364|LCMT1|51451|leucine carboxyl methyltransferase 1##AF151826|LCMT1|51451|leucine carboxyl methyltransferase 1##BC001214|LCMT1|51451|leucine carboxyl methyltransferase 1##BX648785|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK131342|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001012981|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK302399|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4	0.999368	CTCF.p2:12:0.999
chr7	116767755	116767861	reg1010223.p1	10.036	+	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	-107443	+	TSC_hg19_v1_chr7_+_116660271 AK093212	-107541	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	-174235	+	BC078170 AK056742 NM_003391 X07876	195527	-	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	299737	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	352230	+	AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##AK093212|ST7|7982|suppression of tumorigenicity 7##AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	0.976034	CTCF.p2:13:0.976
chr7	43760934	43761058	reg1010175.p1	10.036	+	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	-138302	+	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	-608770	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-789027	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	8098	-	TSC_hg19_v1_chr7_+_43798278 NM_000712 NM_001253823 BC005902 BC008456	37271	+	TSC_hg19_v1_chr7_+_43798283 AK291862 X93086 U34877	37320	+	NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44##NM_000712|BLVRA|644|biliverdin reductase A##NM_001253823|BLVRA|644|biliverdin reductase A##BC005902|BLVRA|644|biliverdin reductase A##BC008456|BLVRA|644|biliverdin reductase A##AK291862|BLVRA|644|biliverdin reductase A##X93086|BLVRA|644|biliverdin reductase A##U34877|BLVRA|644|biliverdin reductase A	0.958191	CTCF.p2:10:0.958
chrX	24517221	24517362	reg1014098.p1	10.036	+	NM_001142386 NM_005391 AK301965 TSC_hg19_v1_chrX_+_24483405 BC015948 L42452 CU677533	-33834	+	NM_001136234	-136414	+	NM_001136233	-185860	-	AF148464 AF052510 TSC_hg19_v1_chrX_-_24665422	148034	-	AK315323 NM_001163265 NM_004845 TSC_hg19_v1_chrX_-_24665465	148168	-	TSC_hg19_v1_chrX_-_24690740 BC045634 AK296333 AK226121 NM_001163264	173568	-	NM_001142386|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_005391|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AK301965|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##BC015948|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##L42452|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1##NM_001136233|FAM48B2|170067|family with sequence similarity 48, member B2##AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	0.617684	CTCF.p2:17:0.618
chrX	67731258	67731366	reg1010605.p1	10.036	+	TSC_hg19_v1_chrX_+_67718892 AK095555 AK292835 BC012469 AK303992 AM393755	-12424	+	NM_001195214 NM_173834	-12689	+	TSC_hg19_v1_chrX_-_67653677 BC059393 NM_002547 AK309665 BC140763 AK295769 AJ001189 AK309696	-77750	-	BC035587 NM_001142503 NM_014725 CR749411	136247	+	TSC_hg19_v1_chrX_+_67913480 AK291747 NM_001142504	182168	+	TSC_hg19_v1_chrX_+_67913490 D80011	182179	+	AK095555|YIPF6|286451|Yip1 domain family, member 6##AK292835|YIPF6|286451|Yip1 domain family, member 6##BC012469|YIPF6|286451|Yip1 domain family, member 6##AK303992|YIPF6|286451|Yip1 domain family, member 6##AM393755|YIPF6|286451|Yip1 domain family, member 6##NM_001195214|YIPF6|286451|Yip1 domain family, member 6##NM_173834|YIPF6|286451|Yip1 domain family, member 6##BC059393|OPHN1|4983|oligophrenin 1##NM_002547|OPHN1|4983|oligophrenin 1##AK309665|OPHN1|4983|oligophrenin 1##BC140763|OPHN1|4983|oligophrenin 1##AK295769|OPHN1|4983|oligophrenin 1##AJ001189|OPHN1|4983|oligophrenin 1##AK309696|OPHN1|4983|oligophrenin 1##BC035587|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142503|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_014725|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##CR749411|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK291747|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142504|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8	0.981978	CTCF.p2:-9:0.982
chr11	28551267	28551398	reg1013337.p1	10.035	+	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-419479	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-421454	+	TSC_hg19_v1_chr11_-_28129704 BC026090 NM_031217	-421609	-	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	1487199	-	NM_000510 NM_001018080	1701230	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	1793320	+	BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##BC026090|KIF18A|81930|kinesin family member 18A##NM_031217|KIF18A|81930|kinesin family member 18A##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46	0.999829	CTCF.p2:1:1.000
chr15	86048430	86048571	reg1011463.p2	10.035	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	-124609	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-382182	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-523174	+	AF127481 NM_144767	171767	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	289597	-	TSC_hg19_v1_chr15_-_86338178 NM_022480	289695	-	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)	0.997371	CTCF.p2:0:0.997
chr2	180616028	180616161	reg1010505.p1	10.035	+	AK096822 NM_001113397	-5326	-	AK057999 NM_001113398	-188780	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	-486689	-	TSC_hg19_v1_chr2_-_180726048 AK131432 BC033042	109953	-	BC092423 TSC_hg19_v1_chr2_-_180726080	109979	-	TSC_hg19_v1_chr2_-_180726110 NM_152520	110071	-	AK096822|ZNF385B|151126|zinc finger protein 385B##NM_001113397|ZNF385B|151126|zinc finger protein 385B##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AK131432|ZNF385B|151126|zinc finger protein 385B##BC033042|ZNF385B|151126|zinc finger protein 385B##BC092423|ZNF385B|151126|zinc finger protein 385B##NM_152520|ZNF385B|151126|zinc finger protein 385B	0.990159	CTCF.p2:20:0.990
chr14	58574822	58574928	reg1010523.p2	10.034	+	NM_001206920	-242284	-	HQ258368 BC117405 BC143565 BC143566 BC143567 BC143568 AK307238 AK223127 AK001512 BC028060 NM_018168	-614372	-	TSC_hg19_v1_chr14_+_57857318 BC118589 BC122557	-717543	+	BC146861 BX161411 NM_001001872 AK292605 BX161448 TSC_hg19_v1_chr14_-_58618906	43981	-	TSC_hg19_v1_chr14_-_58618916 AK292513	44049	-	TSC_hg19_v1_chr14_+_58666880 NM_018477 AK000544 AF220190 AK222624 AK222702 BC005208 AK022534 AK315537 BC011997 DQ891294 DQ894478 AB529154 CU680156 BX248282	92009	+	NM_001206920|SLC35F4|341880|solute carrier family 35, member F4##HQ258368|C14orf105|55195|chromosome 14 open reading frame 105##BC117405|C14orf105|55195|chromosome 14 open reading frame 105##BC143565|C14orf105|55195|chromosome 14 open reading frame 105##BC143566|C14orf105|55195|chromosome 14 open reading frame 105##BC143567|C14orf105|55195|chromosome 14 open reading frame 105##BC143568|C14orf105|55195|chromosome 14 open reading frame 105##AK307238|C14orf105|55195|chromosome 14 open reading frame 105##AK223127|C14orf105|55195|chromosome 14 open reading frame 105##AK001512|C14orf105|55195|chromosome 14 open reading frame 105##BC028060|C14orf105|55195|chromosome 14 open reading frame 105##NM_018168|C14orf105|55195|chromosome 14 open reading frame 105##BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC146861|C14orf37|145407|chromosome 14 open reading frame 37##BX161411|C14orf37|145407|chromosome 14 open reading frame 37##NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37##AK292605|C14orf37|145407|chromosome 14 open reading frame 37##BX161448|C14orf37|145407|chromosome 14 open reading frame 37##AK292513|C14orf37|145407|chromosome 14 open reading frame 37##NM_018477|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK000544|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AF220190|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK222624|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK222702|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BC005208|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK022534|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK315537|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BC011997|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##DQ891294|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##DQ894478|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BX248282|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	0.919467	CTCF.p2:-11:0.919
chr17	42428252	42428369	reg1013023.p1	10.034	+	TSC_hg19_v1_chr17_+_42422669 AK000607 AK222522 AK296090 X62320 AK303830	-5634	+	TSC_hg19_v1_chr17_+_42422640 AF055008	-5673	+	BC000324 NM_002087 TSC_hg19_v1_chr17_+_42422623	-5754	+	TSC_hg19_v1_chr17_-_42441222 BC030200 NM_198475	12912	-	AB528003 J02764 BC117443 BC126442 AK297155 AK315335 M34480 NM_000419	38546	-	TSC_hg19_v1_chr17_-_42580760 BC136629 BC144323 AK025600 BC140010	152454	-	AK000607|GRN|2896|granulin##AK222522|GRN|2896|granulin##AK296090|GRN|2896|granulin##X62320|GRN|2896|granulin##AK303830|GRN|2896|granulin##AF055008|GRN|2896|granulin##BC000324|GRN|2896|granulin##NM_002087|GRN|2896|granulin##BC030200|FAM171A2|284069|family with sequence similarity 171, member A2##NM_198475|FAM171A2|284069|family with sequence similarity 171, member A2##J02764|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC117443|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC126442|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK297155|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK315335|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##M34480|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##NM_000419|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC136629|GPATCH8|23131|G patch domain containing 8##BC144323|GPATCH8|23131|G patch domain containing 8##AK025600|GPATCH8|23131|G patch domain containing 8##BC140010|GPATCH8|23131|G patch domain containing 8	0.979202	CTCF.p2:-2:0.979
chr5	147202408	147202532	reg1013575.p1	10.033	+	TSC_hg19_v1_chr5_-_147162292 AK299724	-40165	-	AF273057 NM_014790 TSC_hg19_v1_chr5_-_147162254	-40216	-	BC017354 TSC_hg19_v1_chr5_-_147162218	-40267	-	DQ893613 DQ896842 AB464195 BC025790 TSC_hg19_v1_chr5_-_147211177 Y00705	8700	-	TSC_hg19_v1_chr5_-_147211236 NM_003122	8777	-	BC024232 NM_054023 AF439545 AY358979 AF313455 AB590291 DQ893093 DQ896365	55849	+	AK299724|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AF273057|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##NM_014790|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##BC017354|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##DQ893613|SPINK1|6690|serine peptidase inhibitor, Kazal type 1##DQ896842|SPINK1|6690|serine peptidase inhibitor, Kazal type 1##BC025790|SPINK1|6690|serine peptidase inhibitor, Kazal type 1##Y00705|SPINK1|6690|serine peptidase inhibitor, Kazal type 1##NM_003122|SPINK1|6690|serine peptidase inhibitor, Kazal type 1##BC024232|SCGB3A2|117156|secretoglobin, family 3A, member 2##NM_054023|SCGB3A2|117156|secretoglobin, family 3A, member 2##AF439545|SCGB3A2|117156|secretoglobin, family 3A, member 2##AY358979|SCGB3A2|117156|secretoglobin, family 3A, member 2##AF313455|SCGB3A2|117156|secretoglobin, family 3A, member 2##DQ893093|SCGB3A2|117156|secretoglobin, family 3A, member 2##DQ896365|SCGB3A2|117156|secretoglobin, family 3A, member 2	0.326474	CTCF.p2:1:0.326
chr7	106587810	106587952	reg1014286.p1	10.033	+	TSC_hg19_v1_chr7_+_106505893 NM_002649 X83368	-81952	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	-82107	+	TSC_hg19_v1_chr7_+_106505701 AK292684	-82168	+	TSC_hg19_v1_chr7_+_106685154 BC075800 M31158 NM_002736 AK128639 AK291441 AB384742 AM392728 AM392771 AM393258 AM393700 CU687290	97322	+	AK295910 NM_001244262 TSC_hg19_v1_chr7_+_106809447 AK298504 BC017069 NM_012257	221558	+	NM_005295 AK122621 AK307393	522621	+	NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC075800|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##M31158|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##NM_002736|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK128639|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK291441|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392728|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392771|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393258|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393700|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK295910|HBP1|26959|HMG-box transcription factor 1##NM_001244262|HBP1|26959|HMG-box transcription factor 1##AK298504|HBP1|26959|HMG-box transcription factor 1##BC017069|HBP1|26959|HMG-box transcription factor 1##NM_012257|HBP1|26959|HMG-box transcription factor 1##NM_005295|GPR22|2845|G protein-coupled receptor 22##AK122621|GPR22|2845|G protein-coupled receptor 22##AK307393|GPR22|2845|G protein-coupled receptor 22	0.053739	
chr14	23656383	23656512	reg1012584.p1	10.032	+	TSC_hg19_v1_chr14_-_23652870 AL365342 NM_012244 Y18483 AL365346 AK223610	-3575	-	TSC_hg19_v1_chr14_-_23652818 AB037669	-3625	-	TSC_hg19_v1_chr14_-_23623523 AK307609 AK300384 BX248288 NM_182728	-32886	-	AB037864 AF463523 TSC_hg19_v1_chr14_-_23755306 AK296927	98822	-	NM_020834 TSC_hg19_v1_chr14_-_23755308	98878	-	NM_001199864 NM_004050 AK289519 TSC_hg19_v1_chr14_+_23776072 BC104789 BC113522 D87461 BC011637 NM_001199839	119597	+	AL365342|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##NM_012244|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##Y18483|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AL365346|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AK223610|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AB037669|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AK307609|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AK300384|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##BX248288|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##NM_182728|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AB037864|HOMEZ|57594|homeobox and leucine zipper encoding##AF463523|HOMEZ|57594|homeobox and leucine zipper encoding##AK296927|HOMEZ|57594|homeobox and leucine zipper encoding##NM_020834|HOMEZ|57594|homeobox and leucine zipper encoding##NM_001199864|BCL2L2-PABPN1|100529063|BCL2L2-PABPN1 readthrough##NM_004050|BCL2L2|599|BCL2-like 2##AK289519|BCL2L2|599|BCL2-like 2##BC104789|BCL2L2|599|BCL2-like 2##BC113522|BCL2L2|599|BCL2-like 2##D87461|BCL2L2|599|BCL2-like 2##BC011637|BCL2L2-PABPN1|100529063|BCL2L2-PABPN1 readthrough##NM_001199839|BCL2L2|599|BCL2-like 2	0.622643	CTCF.p2:14:0.623
chr4	185828492	185828616	reg1012292.p1	10.032	+	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	-81320	-	TSC_hg19_v1_chr4_-_185747123 L09229 AK292798	-81453	-	TSC_hg19_v1_chr4_-_185726866 AK296826	-101651	-	BC140795 BC144567 BC144568 BC144569 NM_001029887	111484	+	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	235916	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	296590	-	AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##L09229|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK292798|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##BC140795|HELT|391723|helt bHLH transcription factor##BC144567|HELT|391723|helt bHLH transcription factor##BC144569|HELT|391723|helt bHLH transcription factor##NM_001029887|HELT|391723|helt bHLH transcription factor##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430	0.125885	
chr16	24420525	24420612	reg1008032.p1	10.031	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	-152870	+	AK055453 TSC_hg19_v1_chr16_+_24267474	-153094	+	BC037899 NM_006539 AK095553	-153694	+	TSC_hg19_v1_chr16_+_24550886 NM_006910 NM_018703 NM_032626	130325	+	AF063596 BC101139 BC101140 BC101141 BC101142 BC114353 BC114354 BC118667 BC139830 BC029352 BC063524 AB112074 AB112075 BX648661 TSC_hg19_v1_chr16_+_24552052	131296	+	BC029649 TSC_hg19_v1_chr16_+_24567629	147060	+	BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006910|RBBP6|5930|retinoblastoma binding protein 6##NM_018703|RBBP6|5930|retinoblastoma binding protein 6##NM_032626|RBBP6|5930|retinoblastoma binding protein 6##AF063596|RBBP6|5930|retinoblastoma binding protein 6##BC101139|RBBP6|5930|retinoblastoma binding protein 6##BC101140|RBBP6|5930|retinoblastoma binding protein 6##BC101141|RBBP6|5930|retinoblastoma binding protein 6##BC101142|RBBP6|5930|retinoblastoma binding protein 6##BC114353|RBBP6|5930|retinoblastoma binding protein 6##BC114354|RBBP6|5930|retinoblastoma binding protein 6##BC118667|RBBP6|5930|retinoblastoma binding protein 6##BC139830|RBBP6|5930|retinoblastoma binding protein 6##BC029352|RBBP6|5930|retinoblastoma binding protein 6##BC063524|RBBP6|5930|retinoblastoma binding protein 6##AB112074|RBBP6|5930|retinoblastoma binding protein 6##AB112075|RBBP6|5930|retinoblastoma binding protein 6##BX648661|RBBP6|5930|retinoblastoma binding protein 6##BC029649|RBBP6|5930|retinoblastoma binding protein 6	0.232006	CTCF.p2:-6:0.232
chr17	38231874	38232005	reg1012887.p1	10.031	+	TSC_hg19_v1_chr17_+_38230679 J03239 DQ892512 DQ895726 AB307686 AB489181 CR541915 CU674114 HQ692859	-1230	+	TSC_hg19_v1_chr17_+_38219217 BC035137 NM_001190918 NM_003250 NM_199334 X55005 BC000261 BC002728 M24899 Y00479	-12766	+	AK290530 NM_001190919 AB209346	-13480	+	TSC_hg19_v1_chr17_-_38252967 AY429554	21042	-	M34339 X72631 TSC_hg19_v1_chr17_-_38256833 BC047875 AK315270 AK300155 BC056148	24783	-	TSC_hg19_v1_chr17_-_38256983 M24898 NM_021724	25035	-	J03239|THRA|7067|thyroid hormone receptor, alpha##DQ892512|THRA|7067|thyroid hormone receptor, alpha##DQ895726|THRA|7067|thyroid hormone receptor, alpha##AB307686|THRA|7067|thyroid hormone receptor, alpha##CR541915|THRA|7067|thyroid hormone receptor, alpha##HQ692859|THRA|7067|thyroid hormone receptor, alpha##BC035137|THRA|7067|thyroid hormone receptor, alpha##NM_001190918|THRA|7067|thyroid hormone receptor, alpha##NM_003250|THRA|7067|thyroid hormone receptor, alpha##NM_199334|THRA|7067|thyroid hormone receptor, alpha##X55005|THRA|7067|thyroid hormone receptor, alpha##BC000261|THRA|7067|thyroid hormone receptor, alpha##BC002728|THRA|7067|thyroid hormone receptor, alpha##M24899|THRA|7067|thyroid hormone receptor, alpha##Y00479|THRA|7067|thyroid hormone receptor, alpha##AK290530|THRA|7067|thyroid hormone receptor, alpha##NM_001190919|THRA|7067|thyroid hormone receptor, alpha##AB209346|THRA|7067|thyroid hormone receptor, alpha##AY429554|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##M24898|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##NM_021724|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	0.953042	CTCF.p2:10:0.953
chrX	107468031	107468155	reg1011144.p1	10.031	+	BC061696 NM_052936 NM_178270 BC041862 AK293533 AJ504651 AK314429 AJ320508 AJ320509 AK054927	-133126	+	AB528690 BT019689 GQ129344 GQ129345 AK295996 AK309326 TSC_hg19_v1_chrX_-_107334773 AB009619 AY057056 BC011960 AK058108 D83197 NM_002814 NM_170750	-133282	-	BX648658 NM_001170553 NM_182607 AK301783 BC043216 BX640913 AK315846 AK301311 AK292472	-179834	+	BC140855 BC144669 BC000874 BC070203 NM_033641 D21337	213514	-	BT007228 L22763 U04845 NM_001847 BC005305	214570	-	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	214991	+	BC061696|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##NM_052936|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##NM_178270|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##BC041862|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK293533|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ504651|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK314429|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ320508|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ320509|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK054927|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##BT019689|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129344|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129345|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK295996|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK309326|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AB009619|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AY057056|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BC011960|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK058108|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##D83197|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_002814|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_170750|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1##BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1##BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1##BC140855|COL4A6|1288|collagen, type IV, alpha 6##BC144669|COL4A6|1288|collagen, type IV, alpha 6##BC000874|COL4A6|1288|collagen, type IV, alpha 6##BC070203|COL4A6|1288|collagen, type IV, alpha 6##NM_033641|COL4A6|1288|collagen, type IV, alpha 6##D21337|COL4A6|1288|collagen, type IV, alpha 6##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5	0.99561	CTCF.p2:14:0.996
chrX	75365458	75365618	reg1009908.p1	10.031	+	BC093964 BC111949 AF490509 AK094624 NM_138703	-360510	-	TSC_hg19_v1_chrX_-_74743299 NM_001146256 NM_001146257 NM_144969	-622221	-	AY358786 TSC_hg19_v1_chrX_-_74743270	-622272	-	AY927529 AY927616 BC001220 NM_016500 TSC_hg19_v1_chrX_+_75392896 AF151079 BC051894	27301	+	TSC_hg19_v1_chrX_+_75392955 CU674612	27417	+	NM_020932 TSC_hg19_v1_chrX_+_75648083 AB046807 AF490507 AK291270 BC050588	282566	+	BC093964|MAGEE2|139599|melanoma antigen family E, 2##BC111949|MAGEE2|139599|melanoma antigen family E, 2##AF490509|MAGEE2|139599|melanoma antigen family E, 2##AK094624|MAGEE2|139599|melanoma antigen family E, 2##NM_138703|MAGEE2|139599|melanoma antigen family E, 2##NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15##NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15##NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15##AY358786|ZDHHC15|158866|zinc finger, DHHC-type containing 15##AY927616|CXorf26|51260|chromosome X open reading frame 26##BC001220|CXorf26|51260|chromosome X open reading frame 26##NM_016500|CXorf26|51260|chromosome X open reading frame 26##BC051894|CXorf26|51260|chromosome X open reading frame 26##NM_020932|MAGEE1|57692|melanoma antigen family E, 1##AB046807|MAGEE1|57692|melanoma antigen family E, 1##AF490507|MAGEE1|57692|melanoma antigen family E, 1##AK291270|MAGEE1|57692|melanoma antigen family E, 1##BC050588|MAGEE1|57692|melanoma antigen family E, 1	0.011928	
chr20	62685842	62685962	reg1008908.p1	10.030	+	AJ243896 AF270652 BC111390 NM_018419 BC035513 BC038590 BC073971 TSC_hg19_v1_chr20_-_62680993 AB033888	-4964	-	TSC_hg19_v1_chr20_+_62612576 AB527848	-73316	+	AF221842 TSC_hg19_v1_chr20_+_62612506 AF026031 AK314310 AB019219 BC001666	-73371	+	NM_198723	2536	+	NM_003195	8107	+	TSC_hg19_v1_chr20_+_62694558 BC050623 BC014211 BC063636 BC018896 BC050624 BC056407 D50495 AB590039 CR456940 CU690746 EU446904	8658	+	AJ243896|SOX18|54345|SRY (sex determining region Y)-box 18##AF270652|SOX18|54345|SRY (sex determining region Y)-box 18##BC111390|SOX18|54345|SRY (sex determining region Y)-box 18##NM_018419|SOX18|54345|SRY (sex determining region Y)-box 18##BC035513|SOX18|54345|SRY (sex determining region Y)-box 18##BC038590|SOX18|54345|SRY (sex determining region Y)-box 18##BC073971|SOX18|54345|SRY (sex determining region Y)-box 18##AB033888|SOX18|54345|SRY (sex determining region Y)-box 18##AF221842|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF026031|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK314310|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AB019219|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##BC001666|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2##BC050623|TCEA2|6919|transcription elongation factor A (SII), 2##BC014211|TCEA2|6919|transcription elongation factor A (SII), 2##BC018896|TCEA2|6919|transcription elongation factor A (SII), 2##BC050624|TCEA2|6919|transcription elongation factor A (SII), 2##BC056407|TCEA2|6919|transcription elongation factor A (SII), 2##D50495|TCEA2|6919|transcription elongation factor A (SII), 2##CR456940|TCEA2|6919|transcription elongation factor A (SII), 2##EU446904|TCEA2|6919|transcription elongation factor A (SII), 2	0.027704	
chr13	80917118	80917230	reg1011381.p1	10.029	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-2110	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-4132	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-861619	+	TSC_hg19_v1_chr13_-_84456424 BC051738	3539251	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	3539326	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	5456265	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.999899	CTCF.p2:-8:1.000
chr20	30048421	30048571	reg1011761.p1	10.029	+	AY122475 NM_153324 AY358859 AY501002 BC126365 BC126391 AF479701	-20041	+	NM_001171832	-47856	-	HQ258031 AY501000 BC130607 BC130609 NM_001011878	-54485	-	DQ119827 NM_001037500 AB528811	12320	-	AK313060 BC039813 NM_014012 AF152863	14603	+	TSC_hg19_v1_chr20_+_30102254 NM_030789 NM_178580 NM_178581 NM_178582 AK314410 BC008938 BC008959 AY169310 AY169311 AY169312 AK075283 DQ168450	53752	+	AY122475|DEFB123|245936|defensin, beta 123##NM_153324|DEFB123|245936|defensin, beta 123##AY358859|DEFB123|245936|defensin, beta 123##BC126365|DEFB123|245936|defensin, beta 123##BC126391|DEFB123|245936|defensin, beta 123##AF479701|DEFB123|245936|defensin, beta 123##NM_001171832|DEFB121|245934|defensin, beta 121##HQ258031|DEFB121|245934|defensin, beta 121##AY501000|DEFB121|245934|defensin, beta 121##BC130607|DEFB121|245934|defensin, beta 121##BC130609|DEFB121|245934|defensin, beta 121##NM_001011878|DEFB121|245934|defensin, beta 121##DQ119827|DEFB124|245937|defensin, beta 124##NM_001037500|DEFB124|245937|defensin, beta 124##AK313060|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1##BC039813|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1##NM_014012|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1##AF152863|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1##NM_030789|HM13|81502|histocompatibility (minor) 13##NM_178580|HM13|81502|histocompatibility (minor) 13##NM_178581|HM13|81502|histocompatibility (minor) 13##NM_178582|HM13|81502|histocompatibility (minor) 13##AK314410|HM13|81502|histocompatibility (minor) 13##BC008938|HM13|81502|histocompatibility (minor) 13##BC008959|HM13|81502|histocompatibility (minor) 13##AY169310|HM13|81502|histocompatibility (minor) 13##AY169311|HM13|81502|histocompatibility (minor) 13##AY169312|HM13|81502|histocompatibility (minor) 13##AK075283|HM13|81502|histocompatibility (minor) 13##DQ168450|HM13|81502|histocompatibility (minor) 13	0.592058	CTCF.p2:-27:0.592
chr12	49974425	49974569	reg1013740.p1	10.028	+	TSC_hg19_v1_chr12_-_49961916 AK123187 BC011794 NM_006337 BX538079 AK308581	-12579	-	AY336730 NM_001012300	-14276	-	TSC_hg19_v1_chr12_+_49932842 AB033108 NM_012284 BC144254 BC150602 AB022696 AB384589	-41477	+	AM393365 AL136748 BC035621 AK302702 AK093242 AX748009 NM_032130	24848	-	TSC_hg19_v1_chr12_+_50017344 AK123353 BC050398 AL834216 NM_012272	42874	+	BC067364 NM_001031698	49829	+	BC011794|MCRS1|10445|microspherule protein 1##NM_006337|MCRS1|10445|microspherule protein 1##BX538079|MCRS1|10445|microspherule protein 1##AY336730|MCRS1|10445|microspherule protein 1##NM_001012300|MCRS1|10445|microspherule protein 1##AB033108|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##NM_012284|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC144254|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC150602|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AB022696|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AM393365|FAM186B|84070|family with sequence similarity 186, member B##AL136748|FAM186B|84070|family with sequence similarity 186, member B##BC035621|FAM186B|84070|family with sequence similarity 186, member B##AK302702|FAM186B|84070|family with sequence similarity 186, member B##AK093242|FAM186B|84070|family with sequence similarity 186, member B##NM_032130|FAM186B|84070|family with sequence similarity 186, member B##AK123353|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##BC050398|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AL834216|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_012272|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##BC067364|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_001031698|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)	0.846682	CTCF.p2:-11:0.847
chrX	78526030	78526153	reg1012155.p1	10.028	+	AF345567 BC104922 BC104924 NM_032553	-99623	+	NM_014499 NM_198333 AK313218 AK292138 BC051875	-325219	+	NM_005296 AK314134	-522883	+	CR456875 CU691874 EU446983 AY359051 AB209310 BC040437 BC010511 TSC_hg19_v1_chrX_-_78622829 AK223327 AK303238 AF038953 BC034485	96692	-	AK313154 NM_001171581 NM_004867	96936	-	AK097514 NM_001109878 NM_001109879	744163	+	AF345567|GPR174|84636|G protein-coupled receptor 174##BC104922|GPR174|84636|G protein-coupled receptor 174##BC104924|GPR174|84636|G protein-coupled receptor 174##NM_032553|GPR174|84636|G protein-coupled receptor 174##NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##CR456875|ITM2A|9452|integral membrane protein 2A##EU446983|ITM2A|9452|integral membrane protein 2A##AY359051|ITM2A|9452|integral membrane protein 2A##AB209310|ITM2A|9452|integral membrane protein 2A##BC040437|ITM2A|9452|integral membrane protein 2A##BC010511|ITM2A|9452|integral membrane protein 2A##AK223327|ITM2A|9452|integral membrane protein 2A##AK303238|ITM2A|9452|integral membrane protein 2A##AF038953|ITM2A|9452|integral membrane protein 2A##BC034485|ITM2A|9452|integral membrane protein 2A##AK313154|ITM2A|9452|integral membrane protein 2A##NM_001171581|ITM2A|9452|integral membrane protein 2A##NM_004867|ITM2A|9452|integral membrane protein 2A##AK097514|TBX22|50945|T-box 22##NM_001109878|TBX22|50945|T-box 22##NM_001109879|TBX22|50945|T-box 22	0.962005	CTCF.p2:21:0.962
chrX	94331592	94331739	reg1014352.p1	10.028	+	NM_001171109 NM_001171110 NM_001171111 NM_173698	-1402654	+	AK090772 D50370 TSC_hg19_v1_chrX_-_92928576 BC034954 AK315176 AK223621 BC094729 AK095682 NM_004538	-1403042	-	AJ564931 NM_001168360 NM_001168361 NM_001168362 NM_001168363 AF206516 AF217288 AY861432 AY861433 AY861434 AY861435	-3241184	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	1608086	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	1608289	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	1807305	+	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A##NM_001171110|FAM133A|286499|family with sequence similarity 133, member A##NM_001171111|FAM133A|286499|family with sequence similarity 133, member A##NM_173698|FAM133A|286499|family with sequence similarity 133, member A##AK090772|NAP1L3|4675|nucleosome assembly protein 1-like 3##D50370|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC034954|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK315176|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK223621|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC094729|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK095682|NAP1L3|4675|nucleosome assembly protein 1-like 3##NM_004538|NAP1L3|4675|nucleosome assembly protein 1-like 3##AJ564931|PCDH11X|27328|protocadherin 11 X-linked##NM_001168360|PCDH11X|27328|protocadherin 11 X-linked##NM_001168361|PCDH11X|27328|protocadherin 11 X-linked##NM_001168362|PCDH11X|27328|protocadherin 11 X-linked##NM_001168363|PCDH11X|27328|protocadherin 11 X-linked##AF206516|PCDH11X|27328|protocadherin 11 X-linked##AF217288|PCDH11X|27328|protocadherin 11 X-linked##AY861432|PCDH11X|27328|protocadherin 11 X-linked##AY861433|PCDH11X|27328|protocadherin 11 X-linked##AY861434|PCDH11X|27328|protocadherin 11 X-linked##AY861435|PCDH11X|27328|protocadherin 11 X-linked##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa	0.897079	CTCF.p2:17:0.897
chr21	35615989	35616120	reg1011188.p1	10.027	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	-170125	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	-170213	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-327962	-	AF302095 DQ192290 NM_172201 BC112087 BC093892	120292	+	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	131771	+	AY789480 NM_001127670 EU008570	212018	-	AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1	0.815875	CTCF.p2:17:0.816
chr22	41913873	41913984	reg1011823.p2	10.027	+	TSC_hg19_v1_chr22_+_41865120 AK293562 AK297213 AK301321 AK314845 AK302691 AK296260 BC026196 BC014092 NM_001098 U80040 CR456365 AB385022 CR536568 CU012932 CU013220 DQ893674 DQ895836	-48797	+	AB489147 CU012956 CU013244 EU446678 TSC_hg19_v1_chr22_-_41864681 BC075808 CR456398 BC007321 NM_032758	-49244	-	TSC_hg19_v1_chr22_-_41842881 NM_016272	-70989	-	TSC_hg19_v1_chr22_-_41940381 AB051452 BC088367 BC017248	26425	-	TSC_hg19_v1_chr22_-_41940495 AY092087 AK026524 AK129663 NM_138338 NM_001018050 NM_001018052 CR456459	26572	-	TSC_hg19_v1_chr22_+_41957014 NM_014460 AK313407 BC067113 AL834417	43141	+	AK293562|ACO2|50|aconitase 2, mitochondrial##AK297213|ACO2|50|aconitase 2, mitochondrial##AK301321|ACO2|50|aconitase 2, mitochondrial##AK314845|ACO2|50|aconitase 2, mitochondrial##AK302691|ACO2|50|aconitase 2, mitochondrial##AK296260|ACO2|50|aconitase 2, mitochondrial##BC026196|ACO2|50|aconitase 2, mitochondrial##BC014092|ACO2|50|aconitase 2, mitochondrial##NM_001098|ACO2|50|aconitase 2, mitochondrial##U80040|ACO2|50|aconitase 2, mitochondrial##CR456365|ACO2|50|aconitase 2, mitochondrial##CR536568|ACO2|50|aconitase 2, mitochondrial##CU012932|ACO2|50|aconitase 2, mitochondrial##CU013220|ACO2|50|aconitase 2, mitochondrial##DQ893674|ACO2|50|aconitase 2, mitochondrial##DQ895836|ACO2|50|aconitase 2, mitochondrial##CU012956|PHF5A|84844|PHD finger protein 5A##CU013244|PHF5A|84844|PHD finger protein 5A##EU446678|PHF5A|84844|PHD finger protein 5A##BC075808|PHF5A|84844|PHD finger protein 5A##CR456398|PHF5A|84844|PHD finger protein 5A##BC007321|PHF5A|84844|PHD finger protein 5A##NM_032758|PHF5A|84844|PHD finger protein 5A##NM_016272|TOB2|10766|transducer of ERBB2, 2##AB051452|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC088367|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC017248|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AY092087|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK026524|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK129663|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_138338|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018050|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018052|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##CR456459|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_014460|CSDC2|27254|cold shock domain containing C2, RNA binding##AK313407|CSDC2|27254|cold shock domain containing C2, RNA binding##BC067113|CSDC2|27254|cold shock domain containing C2, RNA binding##AL834417|CSDC2|27254|cold shock domain containing C2, RNA binding	0.994297	CTCF.p2:13:0.994
chr17	8062200	8062329	reg1011687.p2	10.026	+	BC028207 TSC_hg19_v1_chr17_-_8059648 AK295410	-2529	-	TSC_hg19_v1_chr17_-_8055723 AB088477 AF022991 AK291061 NM_002616	-6544	-	BC039887 AB049064 AB463716 NM_001165967 NM_032580	-34862	-	AL050223 TSC_hg19_v1_chr17_-_8064059	1738	-	TSC_hg19_v1_chr17_-_8066267 BC002737 AK289555 BC019608 BC033870 AK225777 NM_014232	4028	-	CU687070 BC006292 TSC_hg19_v1_chr17_-_8079699 AK127891 AK315666 AK027813 BC119730 BC119731 BC127649 BC127650 AY358525 BC070231 NM_032354 NM_183065	17396	-	BC028207|PER1|5187|period homolog 1 (Drosophila)##AK295410|PER1|5187|period homolog 1 (Drosophila)##AB088477|PER1|5187|period homolog 1 (Drosophila)##AF022991|PER1|5187|period homolog 1 (Drosophila)##AK291061|PER1|5187|period homolog 1 (Drosophila)##NM_002616|PER1|5187|period homolog 1 (Drosophila)##BC039887|HES7|84667|hairy and enhancer of split 7 (Drosophila)##AB049064|HES7|84667|hairy and enhancer of split 7 (Drosophila)##NM_001165967|HES7|84667|hairy and enhancer of split 7 (Drosophila)##NM_032580|HES7|84667|hairy and enhancer of split 7 (Drosophila)##AL050223|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##BC002737|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##AK289555|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##BC019608|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##BC033870|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##AK225777|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##NM_014232|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##BC006292|TMEM107|84314|transmembrane protein 107##AK315666|TMEM107|84314|transmembrane protein 107##AK027813|TMEM107|84314|transmembrane protein 107##BC119730|TMEM107|84314|transmembrane protein 107##BC119731|TMEM107|84314|transmembrane protein 107##BC127649|TMEM107|84314|transmembrane protein 107##BC127650|TMEM107|84314|transmembrane protein 107##AY358525|TMEM107|84314|transmembrane protein 107##BC070231|TMEM107|84314|transmembrane protein 107##NM_032354|TMEM107|84314|transmembrane protein 107##NM_183065|TMEM107|84314|transmembrane protein 107	0.994426	CTCF.p2:2:0.994
chr5	7261235	7261362	reg1012190.p1	10.026	+	AK308405 NM_001171806 AK303516	-515176	+	NM_001171805 NM_006999 AF089896 BC084567	-546548	+	M32313 TSC_hg19_v1_chr5_+_6633683 BT006834 CU679027 DQ891537 DQ894726	-627624	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	134970	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	589961	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	607834	-	AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##M32313|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##BT006834|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##DQ891537|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##DQ894726|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3	0.969636	CTCF.p2:-17:0.970
chr12	98766829	98766972	reg1012548.p1	10.025	+	BC027605 NM_001135175	-1465657	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-1465869	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-1972583	-	TSC_hg19_v1_chr12_-_98897622 AK126817	130727	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	142467	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	142507	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.997222	CTCF.p2:37:0.997
chr19	56143120	56143234	reg1011711.p1	10.025	+	TSC_hg19_v1_chr19_-_56135944 BC065822 NM_203374	-7215	-	AK074859 AK309967 TSC_hg19_v1_chr19_-_56135933	-7245	-	NM_001195605	-18219	+	TSC_hg19_v1_chr19_+_56146387 AK055093	3215	+	TSC_hg19_v1_chr19_+_56152397 AL359054 NM_207115 AK314888	9220	+	NM_016202 NM_001163423	10262	+	BC065822|ZNF784|147808|zinc finger protein 784##NM_203374|ZNF784|147808|zinc finger protein 784##AK074859|ZNF784|147808|zinc finger protein 784##NM_001195605|ZNF865|100507290|zinc finger protein 865##AL359054|ZNF580|51157|zinc finger protein 580##NM_207115|ZNF580|51157|zinc finger protein 580##AK314888|ZNF580|51157|zinc finger protein 580##NM_016202|ZNF580|51157|zinc finger protein 580##NM_001163423|ZNF580|51157|zinc finger protein 580	0.047522	
chr4	144320629	144320758	reg1011191.p1	10.025	+	NM_002039 NM_207123 AK289767 BC064848	-62678	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	-214568	+	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	-214629	+	TSC_hg19_v1_chr4_+_144434860 NM_003601 AK316444 AK302841 BC023144 AB010882 AK308424	114035	+	AB384709 TSC_hg19_v1_chr4_+_144435139	114421	+	TSC_hg19_v1_chr4_+_144480613 AX721285 AX721289 BC025996	159923	+	NM_002039|GAB1|2549|GRB2-associated binding protein 1##NM_207123|GAB1|2549|GRB2-associated binding protein 1##AK289767|GAB1|2549|GRB2-associated binding protein 1##BC064848|GAB1|2549|GRB2-associated binding protein 1##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##BC025996|GUSBP5|441046|glucuronidase, beta pseudogene 5	0.969777	CTCF.p2:16:0.970
chr18	624143	624240	reg1009816.p1	10.024	+	DQ980621 NM_199167 AF395889 D63813	-7496	+	BC025381 NM_014410 AK299319	-27182	+	BC029515 NM_004066 U03270 AK312047 CU688680 DQ890970 DQ894144	-43809	+	TSC_hg19_v1_chr18_+_657615 NM_001071 BC083512 AK223372 BC013919	33355	+	AB062290 TSC_hg19_v1_chr18_+_657656 AK314140 X02308	33457	+	BC002567 TSC_hg19_v1_chr18_+_657708 BC018858 AK292620 AB590362 DQ892149 AB077207 AB077208 BT006811	33520	+	DQ980621|CLUL1|27098|clusterin-like 1 (retinal)##NM_199167|CLUL1|27098|clusterin-like 1 (retinal)##AF395889|CLUL1|27098|clusterin-like 1 (retinal)##D63813|CLUL1|27098|clusterin-like 1 (retinal)##BC025381|CLUL1|27098|clusterin-like 1 (retinal)##NM_014410|CLUL1|27098|clusterin-like 1 (retinal)##AK299319|CLUL1|27098|clusterin-like 1 (retinal)##BC029515|CETN1|1068|centrin, EF-hand protein, 1##NM_004066|CETN1|1068|centrin, EF-hand protein, 1##U03270|CETN1|1068|centrin, EF-hand protein, 1##AK312047|CETN1|1068|centrin, EF-hand protein, 1##DQ890970|CETN1|1068|centrin, EF-hand protein, 1##DQ894144|CETN1|1068|centrin, EF-hand protein, 1##NM_001071|TYMS|7298|thymidylate synthetase##BC083512|TYMS|7298|thymidylate synthetase##AK223372|TYMS|7298|thymidylate synthetase##BC013919|TYMS|7298|thymidylate synthetase##AB062290|TYMS|7298|thymidylate synthetase##AK314140|TYMS|7298|thymidylate synthetase##X02308|TYMS|7298|thymidylate synthetase##BC002567|TYMS|7298|thymidylate synthetase##BC018858|TYMS|7298|thymidylate synthetase##AK292620|TYMS|7298|thymidylate synthetase##DQ892149|TYMS|7298|thymidylate synthetase##AB077207|TYMS|7298|thymidylate synthetase##AB077208|TYMS|7298|thymidylate synthetase##BT006811|TYMS|7298|thymidylate synthetase	0.662133	CTCF.p2:7:0.662
chr12	67087792	67087932	reg1013022.p1	10.023	+	TSC_hg19_v1_chr12_-_67072881 AK095519 NM_001178074 NM_021150	-14960	-	BC115393 BC115394 TSC_hg19_v1_chr12_-_67072757 AK307576	-15106	-	TSC_hg19_v1_chr12_+_66696305 NM_033647 BC143409 BC143411 AK290894 AK024464 AB527324 AF319995	-391533	+	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	575240	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	575310	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	575568	+	AK095519|GRIP1|23426|glutamate receptor interacting protein 1##NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1##NM_021150|GRIP1|23426|glutamate receptor interacting protein 1##BC115393|GRIP1|23426|glutamate receptor interacting protein 1##BC115394|GRIP1|23426|glutamate receptor interacting protein 1##AK307576|GRIP1|23426|glutamate receptor interacting protein 1##NM_033647|HELB|92797|helicase (DNA) B##BC143409|HELB|92797|helicase (DNA) B##BC143411|HELB|92797|helicase (DNA) B##AK290894|HELB|92797|helicase (DNA) B##AF319995|HELB|92797|helicase (DNA) B##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1	0.99908	CTCF.p2:13:0.999
chr10	102430893	102430985	reg1011032.p2	10.022	+	TSC_hg19_v1_chr10_+_102295705 AF395830 BC007719 AB528628 DQ892767 DQ896013	-135181	+	TSC_hg19_v1_chr10_+_102295696 AK295353 NM_017902 AK000622	-135304	+	AF077028 AK293081 AK304277 TSC_hg19_v1_chr10_-_102289637 AF115968 AL080056 NM_005004 AK295867	-141303	-	TSC_hg19_v1_chr10_+_102505338 L25597 M89470 NM_000278 NM_003987 NM_003988 NM_003989 NM_003990	74463	+	AF460991 AF460992 NM_001136123 NM_001243770 NM_018121	241386	+	TSC_hg19_v1_chr10_+_102672719 AK292565 AL832343 AL833126 BC015131 BC047715 BC030565 BC064526 BC020915 BC073832 AL832383 AB385255	241836	+	AF395830|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##BC007719|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ892767|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ896013|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK295353|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##NM_017902|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK000622|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AF077028|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF115968|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AL080056|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##NM_005004|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##L25597|PAX2|5076|paired box 2##M89470|PAX2|5076|paired box 2##NM_000278|PAX2|5076|paired box 2##NM_003987|PAX2|5076|paired box 2##NM_003988|PAX2|5076|paired box 2##NM_003989|PAX2|5076|paired box 2##NM_003990|PAX2|5076|paired box 2##AF460991|FAM178A|55719|family with sequence similarity 178, member A##AF460992|FAM178A|55719|family with sequence similarity 178, member A##NM_001136123|FAM178A|55719|family with sequence similarity 178, member A##NM_001243770|FAM178A|55719|family with sequence similarity 178, member A##NM_018121|FAM178A|55719|family with sequence similarity 178, member A##AK292565|FAM178A|55719|family with sequence similarity 178, member A##AL832343|FAM178A|55719|family with sequence similarity 178, member A##AL833126|FAM178A|55719|family with sequence similarity 178, member A##BC015131|FAM178A|55719|family with sequence similarity 178, member A##BC047715|FAM178A|55719|family with sequence similarity 178, member A##BC030565|FAM178A|55719|family with sequence similarity 178, member A##BC064526|FAM178A|55719|family with sequence similarity 178, member A##BC020915|FAM178A|55719|family with sequence similarity 178, member A##BC073832|FAM178A|55719|family with sequence similarity 178, member A##AL832383|FAM178A|55719|family with sequence similarity 178, member A	0.999522	CTCF.p2:-2:1.000
chr3	75527766	75527853	reg1011609.p1	10.022	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	-43660	-	AB384611 BC150608 NM_020872	-957507	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1853771	-	AK000525 NM_001124759	185674	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	193677	+	NM_001128223	306445	-	BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##NM_001128223|ZNF717|100131827|zinc finger protein 717	0.0	
chr10	104153769	104153905	reg1013596.p1	10.021	+	TSC_hg19_v1_chr10_+_104005308 AF068755 D87435 BC117681 BC117682	-148470	+	NM_001199378 NM_001199379 NM_004193 BC057804 BC068543 TSC_hg19_v1_chr10_+_104005288 BC094763 AK025330 BC032543	-148558	+	BC011642 NM_005029	-152608	-	NM_001077493 TSC_hg19_v1_chr10_+_104154290 BC002844 NM_001077494 S76638	453	+	NM_002502 X61498 X61499 TSC_hg19_v1_chr10_+_104155501 AK292654	1634	+	TSC_hg19_v1_chr10_-_104178575 BC037332	24735	-	AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199378|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199379|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC011642|PITX3|5309|paired-like homeodomain 3##NM_005029|PITX3|5309|paired-like homeodomain 3##NM_001077493|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC002844|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_001077494|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##S76638|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_002502|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61498|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61499|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##AK292654|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC037332|PSD|5662|pleckstrin and Sec7 domain containing	1.006653	CTCF.p2:-3:0.993
chr10	108465465	108465594	reg1011850.p2	10.021	+	TSC_hg19_v1_chr10_-_108459000 AK123752	-6470	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-2064484	+	AB028982 NM_014978	-2064671	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	458847	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	3217680	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	3217748	-	AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.997181	CTCF.p2:-7:0.997
chr11	67761353	67761467	reg1011366.p1	10.021	+	TSC_hg19_v1_chr11_-_67572800 BC063712 BC110365	-188658	-	TSC_hg19_v1_chr11_-_67450557 AB055770	-310864	-	BC007685 NM_001031615	-312726	-	TSC_hg19_v1_chr11_-_67771527 BC101568 BC105104 BC025669 AJ422142 AJ271326 BC092472 BC033623 NM_030930	10157	-	TSC_hg19_v1_chr11_+_67776039 EF411198 NM_001161473	14621	+	TSC_hg19_v1_chr11_+_67777790 NM_000694 NM_001030010 BC002553 AK291505	16380	+	BC063712|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC110365|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##AB055770|RPL37|6167|ribosomal protein L37##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC101568|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC105104|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC025669|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ422142|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ271326|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC092472|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC033623|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##NM_030930|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##EF411198|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001161473|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_000694|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001030010|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##BC002553|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##AK291505|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1	0.996917	CTCF.p2:13:0.997
chr12	110365497	110365608	reg1011171.p1	10.021	+	AY007230 NM_032300 BC022838	-27181	+	TSC_hg19_v1_chr12_+_110338090 AK092736 AX747696 NM_001143852 BC004285 AK301262	-27450	+	AY372530 AY372531 CU679533 AK313457 AF209704 TSC_hg19_v1_chr12_-_110318304 AY372532 BC009932 NM_016433	-47274	-	AB451294 AB451428 AF124491 AK303198 BT007312 CR533568 AB385285 TSC_hg19_v1_chr12_-_110434050	68487	-	TSC_hg19_v1_chr12_-_110434107 BC001379 D63482 AK222736 AK308304	68530	-	AK304240 TSC_hg19_v1_chr12_-_110434185	68629	-	AY007230|TCHP|84260|trichoplein, keratin filament binding##NM_032300|TCHP|84260|trichoplein, keratin filament binding##BC022838|TCHP|84260|trichoplein, keratin filament binding##AK092736|TCHP|84260|trichoplein, keratin filament binding##NM_001143852|TCHP|84260|trichoplein, keratin filament binding##BC004285|TCHP|84260|trichoplein, keratin filament binding##AK301262|TCHP|84260|trichoplein, keratin filament binding##AY372530|GLTP|51228|glycolipid transfer protein##AY372531|GLTP|51228|glycolipid transfer protein##AK313457|GLTP|51228|glycolipid transfer protein##AF209704|GLTP|51228|glycolipid transfer protein##AY372532|GLTP|51228|glycolipid transfer protein##BC009932|GLTP|51228|glycolipid transfer protein##NM_016433|GLTP|51228|glycolipid transfer protein##AB451294|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AB451428|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AF124491|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AK303198|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##BT007312|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##CR533568|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##BC001379|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##D63482|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AK222736|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AK308304|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AK304240|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2	0.265831	CTCF.p2:8:0.266
chr19	35581497	35581613	reg1011589.p1	10.021	+	TSC_hg19_v1_chr19_+_35550794 X07002	-30745	+	TSC_hg19_v1_chr19_+_35532642 AK315655	-48899	+	TSC_hg19_v1_chr19_+_35532623 BC025716	-48929	+	NM_001136007 NM_001136008 NM_001136009 NM_001136010 NM_001136011 NM_001136012 NM_005971 NM_021910 BC090044 U28249	25209	+	X93036 TSC_hg19_v1_chr19_+_35607221 BC005238 AK311689	25666	+	AJ487959 BC136694 BC136697 BC087848 AY358121 AF467954 TSC_hg19_v1_chr19_-_35625958	44231	-	X07002|HPN|3249|hepsin##AK315655|HPN|3249|hepsin##BC025716|HPN|3249|hepsin##NM_001136007|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136008|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136009|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136010|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136011|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136012|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_005971|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_021910|FXYD3|5349|FXYD domain containing ion transport regulator 3##BC090044|FXYD3|5349|FXYD domain containing ion transport regulator 3##U28249|FXYD3|5349|FXYD domain containing ion transport regulator 3##X93036|FXYD3|5349|FXYD domain containing ion transport regulator 3##BC005238|FXYD3|5349|FXYD domain containing ion transport regulator 3##AK311689|FXYD3|5349|FXYD domain containing ion transport regulator 3##AJ487959|LGI4|163175|leucine-rich repeat LGI family, member 4##BC136694|LGI4|163175|leucine-rich repeat LGI family, member 4##BC136697|LGI4|163175|leucine-rich repeat LGI family, member 4##BC087848|LGI4|163175|leucine-rich repeat LGI family, member 4##AY358121|LGI4|163175|leucine-rich repeat LGI family, member 4##AF467954|LGI4|163175|leucine-rich repeat LGI family, member 4	0.0	
chr4	56814856	56815014	reg1011162.p1	10.021	+	TSC_hg19_v1_chr4_+_56719840 BC094751 NM_001024924 NM_018261 NM_178237 AK001755 AK027413	-95070	+	DQ891295 DQ894479 BC012908 NM_006681 X76029 TSC_hg19_v1_chr4_-_56502465	-312523	-	BC034431 NM_152401	-356557	-	AK023683 NM_025009 TSC_hg19_v1_chr4_+_56815093 BC136535 BC136536	156	+	AK126014 NM_020722	221425	+	AF516672 AY422212 BC142709 TSC_hg19_v1_chr4_-_57253644 AF161436 AK303733 BC141824 AK294332 AY314787 BC015096 NM_181806 AK316296 AK304309 BX648853	438692	-	BC094751|EXOC1|55763|exocyst complex component 1##NM_001024924|EXOC1|55763|exocyst complex component 1##NM_018261|EXOC1|55763|exocyst complex component 1##NM_178237|EXOC1|55763|exocyst complex component 1##AK001755|EXOC1|55763|exocyst complex component 1##AK027413|EXOC1|55763|exocyst complex component 1##DQ891295|NMU|10874|neuromedin U##DQ894479|NMU|10874|neuromedin U##BC012908|NMU|10874|neuromedin U##NM_006681|NMU|10874|neuromedin U##X76029|NMU|10874|neuromedin U##BC034431|PDCL2|132954|phosducin-like 2##NM_152401|PDCL2|132954|phosducin-like 2##AK023683|CEP135|9662|centrosomal protein 135kDa##NM_025009|CEP135|9662|centrosomal protein 135kDa##BC136535|CEP135|9662|centrosomal protein 135kDa##BC136536|CEP135|9662|centrosomal protein 135kDa##AK126014|KIAA1211|57482|KIAA1211##NM_020722|KIAA1211|57482|KIAA1211##AF516672|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AY422212|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC142709|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AF161436|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK303733|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC141824|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK294332|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AY314787|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC015096|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##NM_181806|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK316296|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK304309|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BX648853|AASDH|132949|aminoadipate-semialdehyde dehydrogenase	0.997095	CTCF.p2:8:0.997
chr6	160274067	160274199	reg1010503.p1	10.021	+	TSC_hg19_v1_chr6_+_160221313 AK097559 NM_173516 AK093139 AX747947 BC112246	-52790	+	TSC_hg19_v1_chr6_+_160211500 NM_014161 AF161556 BC001623 AL136633 AK292647 AB528185 AM393775 CR533491	-62583	+	TSC_hg19_v1_chr6_+_160210978 AK311391	-63130	+	BC069142 BC069581 BC110454 NM_002377 CU686912 CR542261	53846	+	TSC_hg19_v1_chr6_+_160390137 NM_000876 Y00285 J03528	116000	+	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	268781	+	AK097559|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_173516|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##AK093139|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##BC112246|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_014161|MRPL18|29074|mitochondrial ribosomal protein L18##AF161556|MRPL18|29074|mitochondrial ribosomal protein L18##BC001623|MRPL18|29074|mitochondrial ribosomal protein L18##AL136633|MRPL18|29074|mitochondrial ribosomal protein L18##AM393775|MRPL18|29074|mitochondrial ribosomal protein L18##CR533491|MRPL18|29074|mitochondrial ribosomal protein L18##AK311391|MRPL18|29074|mitochondrial ribosomal protein L18##BC069142|MAS1|4142|MAS1 oncogene##BC069581|MAS1|4142|MAS1 oncogene##BC110454|MAS1|4142|MAS1 oncogene##NM_002377|MAS1|4142|MAS1 oncogene##CR542261|MAS1|4142|MAS1 oncogene##NM_000876|IGF2R|3482|insulin-like growth factor 2 receptor##Y00285|IGF2R|3482|insulin-like growth factor 2 receptor##J03528|IGF2R|3482|insulin-like growth factor 2 receptor##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1	0.174273	
chr8	38269193	38269326	reg1007400.p3	10.021	+	BC024250 NM_001199660	-24612	+	NM_001199659 NM_144652 TSC_hg19_v1_chr8_+_38244011 AK289944 AK058138 AK302317 BC069830 AL832241 AY173945 AK302474	-25249	+	TSC_hg19_v1_chr8_-_38239790 AF332468 AF332469 NM_017778 NM_023034 BC000030	-29463	-	AK291754 AK309947 AK292470 NM_001174065 NM_001174066 NM_001174067	56042	-	X51803 X57119 X57120 X57121 X57122 M37722 M34185 TSC_hg19_v1_chr8_-_38325674	56348	-	M34187 M34188 M34186 TSC_hg19_v1_chr8_-_38326072	56689	-	BC024250|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##NM_001199660|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##NM_001199659|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##NM_144652|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK289944|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK058138|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK302317|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##BC069830|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AL832241|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AY173945|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK302474|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AF332468|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##AF332469|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##NM_017778|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##NM_023034|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##BC000030|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##AK291754|FGFR1|2260|fibroblast growth factor receptor 1##AK309947|FGFR1|2260|fibroblast growth factor receptor 1##AK292470|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1##X51803|FGFR1|2260|fibroblast growth factor receptor 1##X57119|FGFR1|2260|fibroblast growth factor receptor 1##X57120|FGFR1|2260|fibroblast growth factor receptor 1##X57121|FGFR1|2260|fibroblast growth factor receptor 1##X57122|FGFR1|2260|fibroblast growth factor receptor 1##M37722|FGFR1|2260|fibroblast growth factor receptor 1##M34185|FGFR1|2260|fibroblast growth factor receptor 1##M34187|FGFR1|2260|fibroblast growth factor receptor 1##M34188|FGFR1|2260|fibroblast growth factor receptor 1##M34186|FGFR1|2260|fibroblast growth factor receptor 1	0.999599	CTCF.p2:-1:1.000
chr11	12352961	12353095	reg1011720.p2	10.020	+	AK123671 NM_032867	-44582	+	TSC_hg19_v1_chr11_+_12132122 BC044577 NM_014632 BC015755 AB018293	-220898	+	TSC_hg19_v1_chr11_-_12030884 AB057591 NM_013253	-322126	-	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	46081	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	342935	+	TSC_hg19_v1_chr11_+_12960793 AK075236	607783	+	AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##BC044577|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_014632|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##BC015755|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB018293|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB057591|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_013253|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)	0.999504	CTCF.p2:-5:1.000
chr14	23341874	23342017	reg1010259.p1	10.020	+	TSC_hg19_v1_chr14_+_23341364 AL834518 AK291030 BC113714 BC113716	-523	+	TSC_hg19_v1_chr14_+_23340981 NM_014045 AY358399 BX161500	-924	+	Z48481 TSC_hg19_v1_chr14_+_23305913 D26512 X90925 AB385035 CU687944 U41078	-35976	+	AK299238 AK096283 NM_173527 BC035663	10490	+	TSC_hg19_v1_chr14_-_23388350 BX161440 BC024208 BC106012 AL834198 AF087905 AK001344 AF275678 AK125593 AK225792 AK295448 AK303668 AK308055 AK315620	46381	-	TSC_hg19_v1_chr14_-_23388359 BC002566	46422	-	AL834518|LRP10|26020|low density lipoprotein receptor-related protein 10##AK291030|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113714|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113716|LRP10|26020|low density lipoprotein receptor-related protein 10##NM_014045|LRP10|26020|low density lipoprotein receptor-related protein 10##AY358399|LRP10|26020|low density lipoprotein receptor-related protein 10##BX161500|LRP10|26020|low density lipoprotein receptor-related protein 10##Z48481|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##D26512|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##X90925|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##U41078|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##AK299238|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##AK096283|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##NM_173527|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##BC035663|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##BX161440|RBM23|55147|RNA binding motif protein 23##BC024208|RBM23|55147|RNA binding motif protein 23##BC106012|RBM23|55147|RNA binding motif protein 23##AL834198|RBM23|55147|RNA binding motif protein 23##AF087905|RBM23|55147|RNA binding motif protein 23##AK001344|RBM23|55147|RNA binding motif protein 23##AF275678|RBM23|55147|RNA binding motif protein 23##AK125593|RBM23|55147|RNA binding motif protein 23##AK225792|RBM23|55147|RNA binding motif protein 23##AK295448|RBM23|55147|RNA binding motif protein 23##AK303668|RBM23|55147|RNA binding motif protein 23##AK308055|RBM23|55147|RNA binding motif protein 23##AK315620|RBM23|55147|RNA binding motif protein 23##BC002566|RBM23|55147|RNA binding motif protein 23	0.357746	CTCF.p2:0:0.358
chr17	68548690	68548815	reg1011226.p1	10.019	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-383056	+	BC033038 NM_170742	-447758	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-477322	+	TSC_hg19_v1_chr17_-_70116937 AL833139	1568186	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	1568407	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	1568418	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.973627	CTCF.p2:13:0.974
chr19	40926644	40926824	reg1012074.p1	10.019	+	AF321191 AF321192 NM_020956 NM_181882 BC067266	-7463	-	AK302301 AK301713 AK292228 BC034501 NM_144685 AK057380	-30647	-	BC000553 TSC_hg19_v1_chr19_+_40872852	-53951	+	BC002670 AF366402 AF117959 AK222970 AK223011 TSC_hg19_v1_chr19_-_40931900 AK074652 NM_013376	5171	-	AF192529 NM_013368	21770	-	TSC_hg19_v1_chr19_-_40950200 BC014061 AK074604	23477	-	AF321191|PRX|57716|periaxin##AF321192|PRX|57716|periaxin##NM_020956|PRX|57716|periaxin##NM_181882|PRX|57716|periaxin##BC067266|PRX|57716|periaxin##AK302301|HIPK4|147746|homeodomain interacting protein kinase 4##AK301713|HIPK4|147746|homeodomain interacting protein kinase 4##AK292228|HIPK4|147746|homeodomain interacting protein kinase 4##BC034501|HIPK4|147746|homeodomain interacting protein kinase 4##NM_144685|HIPK4|147746|homeodomain interacting protein kinase 4##AK057380|HIPK4|147746|homeodomain interacting protein kinase 4##BC000553|PLD3|23646|phospholipase D family, member 3##BC002670|SERTAD1|29950|SERTA domain containing 1##AF366402|SERTAD1|29950|SERTA domain containing 1##AF117959|SERTAD1|29950|SERTA domain containing 1##AK222970|SERTAD1|29950|SERTA domain containing 1##AK223011|SERTAD1|29950|SERTA domain containing 1##AK074652|SERTAD1|29950|SERTA domain containing 1##NM_013376|SERTAD1|29950|SERTA domain containing 1##AF192529|SERTAD3|29946|SERTA domain containing 3##NM_013368|SERTAD3|29946|SERTA domain containing 3##BC014061|SERTAD3|29946|SERTA domain containing 3##AK074604|SERTAD3|29946|SERTA domain containing 3	0.978149	CTCF.p2:-14:0.978
chr1	179261590	179261719	reg1010613.p1	10.017	+	TSC_hg19_v1_chr1_-_179198815 AK311045 NM_001136001 NM_001168236 NM_001168237 NM_001168238 NM_007314	-62835	-	M35296 TSC_hg19_v1_chr1_-_179198813	-62880	-	FJ542283 BC065912 AK225255 TSC_hg19_v1_chr1_-_179112210 AK309549 NM_001136000 NM_001168239 NM_005158	-149454	-	NM_001252511 NM_001252512 NM_003101 TSC_hg19_v1_chr1_+_179262876	1212	+	TSC_hg19_v1_chr1_+_179262931 AK300551 AK290659 AK294047	1255	+	AK026611 TSC_hg19_v1_chr1_+_179262936 AL833625	1289	+	AK311045|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001136001|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168236|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168237|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168238|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_007314|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##M35296|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001252511|SOAT1|6646|sterol O-acyltransferase 1##NM_001252512|SOAT1|6646|sterol O-acyltransferase 1##NM_003101|SOAT1|6646|sterol O-acyltransferase 1##AK300551|SOAT1|6646|sterol O-acyltransferase 1##AK290659|SOAT1|6646|sterol O-acyltransferase 1##AK294047|SOAT1|6646|sterol O-acyltransferase 1##AK026611|SOAT1|6646|sterol O-acyltransferase 1##AL833625|SOAT1|6646|sterol O-acyltransferase 1	0.0	
chr1	19980306	19980420	reg1012671.p1	10.017	+	AK309257 NM_001204086	-8104	+	AK313265 NM_001204085	-8498	+	TSC_hg19_v1_chr1_+_19970804 NM_005380 BC012037 D28124	-9576	+	L41147 NM_000871	11416	+	TSC_hg19_v1_chr1_-_20126374 BX640987 NM_181719	146047	-	CR457228 BC051880 BC030960 AK000232 AK222991 NM_019062	161318	-	AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_005380|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##BC012037|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##D28124|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##L41147|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##NM_000871|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4##NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4##CR457228|RNF186|54546|ring finger protein 186##BC051880|RNF186|54546|ring finger protein 186##BC030960|RNF186|54546|ring finger protein 186##AK000232|RNF186|54546|ring finger protein 186##AK222991|RNF186|54546|ring finger protein 186##NM_019062|RNF186|54546|ring finger protein 186	0.92665	CTCF.p2:2:0.927
chr17	56495039	56495162	reg1011126.p1	10.017	+	NM_017763 TSC_hg19_v1_chr17_-_56494959 CR627423	-156	-	TSC_hg19_v1_chr17_-_56494896 CR749257	-207	-	AB527734 TSC_hg19_v1_chr17_-_56492959 AK296769 AK000322 BC109028	-2064	-	BC115385 BC115386 BC033017 BC033020 NM_001080439 TSC_hg19_v1_chr17_-_56565791	70649	-	TSC_hg19_v1_chr17_-_56591953 AK308877	96842	-	AF264717 TSC_hg19_v1_chr17_-_56595226 BC035609 NM_004687	100143	-	NM_017763|RNF43|54894|ring finger protein 43##CR627423|RNF43|54894|ring finger protein 43##CR749257|RNF43|54894|ring finger protein 43##AK296769|RNF43|54894|ring finger protein 43##AK000322|RNF43|54894|ring finger protein 43##BC109028|RNF43|54894|ring finger protein 43##BC115385|HSF5|124535|heat shock transcription factor family member 5##BC115386|HSF5|124535|heat shock transcription factor family member 5##BC033017|HSF5|124535|heat shock transcription factor family member 5##BC033020|HSF5|124535|heat shock transcription factor family member 5##NM_001080439|HSF5|124535|heat shock transcription factor family member 5##AK308877|MTMR4|9110|myotubularin related protein 4##AF264717|MTMR4|9110|myotubularin related protein 4##BC035609|MTMR4|9110|myotubularin related protein 4##NM_004687|MTMR4|9110|myotubularin related protein 4	0.0	
chr4	155728316	155728428	reg1010347.p1	10.017	+	NM_144979 AK302720 BC028588	-25910	+	TSC_hg19_v1_chr4_+_155665151 AY546085 AY546086 NM_004744 AF071510	-63156	+	TSC_hg19_v1_chr4_+_155665114 AK292598	-63254	+	NM_000910 U42766	401408	+	TSC_hg19_v1_chr4_-_156297959 BC022852	569583	-	TSC_hg19_v1_chr4_-_156297990 AK301075 BC146864 BC128540 BC128541 BC056683	569636	-	NM_144979|RBM46|166863|RNA binding motif protein 46##AK302720|RBM46|166863|RNA binding motif protein 46##BC028588|RBM46|166863|RNA binding motif protein 46##AY546085|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AY546086|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_004744|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AF071510|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AK292598|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_000910|NPY2R|4887|neuropeptide Y receptor Y2##U42766|NPY2R|4887|neuropeptide Y receptor Y2##BC022852|MAP9|79884|microtubule-associated protein 9##AK301075|MAP9|79884|microtubule-associated protein 9##BC146864|MAP9|79884|microtubule-associated protein 9##BC128540|MAP9|79884|microtubule-associated protein 9##BC128541|MAP9|79884|microtubule-associated protein 9##BC056683|MAP9|79884|microtubule-associated protein 9	0.0	
chr6	13874104	13874235	reg1013606.p1	10.017	+	BC008234 TSC_hg19_v1_chr6_-_13814790 BC016850 NM_001031713 AK024611	-59401	-	BC052781 TSC_hg19_v1_chr6_-_13711955	-162195	-	TSC_hg19_v1_chr6_-_13711730 AB055311 NM_005493	-162434	-	NM_001165034	50507	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	50997	+	NM_001165033 AK090576 AX746519	51274	+	BC008234|CCDC90A|63933|coiled-coil domain containing 90A##BC016850|CCDC90A|63933|coiled-coil domain containing 90A##NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A##AK024611|CCDC90A|63933|coiled-coil domain containing 90A##BC052781|RANBP9|10048|RAN binding protein 9##AB055311|RANBP9|10048|RAN binding protein 9##NM_005493|RANBP9|10048|RAN binding protein 9##NM_001165034|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182##NM_001165033|RNF182|221687|ring finger protein 182##AK090576|RNF182|221687|ring finger protein 182	1.02216	CTCF.p2:-12:1.000
chr15	68846486	68846601	reg1010441.p1	10.016	+	TSC_hg19_v1_chr15_-_68724505 AF109681 AF137378 NM_001004439 AK292445 AK304778 AK095863	-122045	-	TSC_hg19_v1_chr15_+_68570434 AK290167	-276119	+	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	-276450	+	TSC_hg19_v1_chr15_+_68871402 NM_006091	24800	+	NM_001190456	62335	+	AK289678 NM_001190457	77783	+	AF109681|ITGA11|22801|integrin, alpha 11##AF137378|ITGA11|22801|integrin, alpha 11##NM_001004439|ITGA11|22801|integrin, alpha 11##AK292445|ITGA11|22801|integrin, alpha 11##AK304778|ITGA11|22801|integrin, alpha 11##AK095863|ITGA11|22801|integrin, alpha 11##AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B##AK289678|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190457|CORO2B|10391|coronin, actin binding protein, 2B	0.999779	CTCF.p2:-7:1.000
chr20	45386875	45386995	reg1012094.p1	10.015	+	AF248053 TSC_hg19_v1_chr20_+_45338287 AK055548 NM_030777 BC101657 BC113423 AK290961 AK315269 AF321240	-48698	+	TSC_hg19_v1_chr20_-_45318164 BC009727 AB017505 AB065434 NM_033550	-68714	-	TSC_hg19_v1_chr20_-_45318084 BC010637 BC035461 AB587589 AK096502 BC066309 BC019621 AK315182	-68968	-	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	136347	+	TSC_hg19_v1_chr20_+_45523505 BC008803	136573	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	136617	+	AF248053|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK055548|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##NM_030777|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC101657|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC113423|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK290961|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK315269|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AF321240|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC009727|TP53RK|112858|TP53 regulating kinase##AB017505|TP53RK|112858|TP53 regulating kinase##AB065434|TP53RK|112858|TP53 regulating kinase##NM_033550|TP53RK|112858|TP53 regulating kinase##BC010637|TP53RK|112858|TP53 regulating kinase##BC035461|TP53RK|112858|TP53 regulating kinase##AK096502|TP53RK|112858|TP53 regulating kinase##BC066309|TP53RK|112858|TP53 regulating kinase##BC019621|TP53RK|112858|TP53 regulating kinase##AK315182|TP53RK|112858|TP53 regulating kinase##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)	0.98671	CTCF.p2:-18:0.987
chr7	37549796	37549894	reg1009889.p1	10.015	+	NM_001206480	-60951	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	-61290	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	-61377	-	BC043356 TSC_hg19_v1_chr7_+_37723380	173537	+	AB529245 AY288420 BC120951 BC120952 NM_181791	230150	+	BC036816 NM_016616	338353	+	NM_001206480|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##AY288420|GPR141|353345|G protein-coupled receptor 141##BC120951|GPR141|353345|G protein-coupled receptor 141##BC120952|GPR141|353345|G protein-coupled receptor 141##NM_181791|GPR141|353345|G protein-coupled receptor 141##BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)	0.994373	CTCF.p2:-2:0.994
chr1	116903528	116903650	reg1011647.p1	10.014	+	AK096035 NM_152367	-249214	+	TSC_hg19_v1_chr1_+_116519194 BC070033 AY358258 AY145501 CU693234 DQ892367 DQ895576	-384360	+	NM_018420 BC026358 TSC_hg19_v1_chr1_+_116519161	-384446	+	NM_000701 TSC_hg19_v1_chr1_+_116915824	12222	+	BC003077 TSC_hg19_v1_chr1_+_116915881 BC050359	12293	+	TSC_hg19_v1_chr1_+_116915952 AK314777	12359	+	AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)##BC070033|SLC22A15|55356|solute carrier family 22, member 15##AY358258|SLC22A15|55356|solute carrier family 22, member 15##AY145501|SLC22A15|55356|solute carrier family 22, member 15##DQ892367|SLC22A15|55356|solute carrier family 22, member 15##DQ895576|SLC22A15|55356|solute carrier family 22, member 15##NM_018420|SLC22A15|55356|solute carrier family 22, member 15##BC026358|SLC22A15|55356|solute carrier family 22, member 15##NM_000701|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC003077|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC050359|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK314777|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.668075	CTCF.p2:-1:0.668
chr15	97778688	97778807	reg1011447.p1	10.014	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	-452075	+	NM_001145157	-902179	+	AK316086 NM_001145156	-902954	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	725172	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	725204	+	AK097062 AK097062 NM_182562	1278863	-	AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B	0.978275	CTCF.p2:9:0.978
chr21	46898130	46898253	reg1010487.p1	10.014	+	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	-22773	+	AB590554 TSC_hg19_v1_chr21_+_46825311	-72890	+	TSC_hg19_v1_chr21_+_46825079 AK130835 AF018082 NM_130445 BC063833	-73123	+	AK303168 NM_001205207	56343	-	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	64141	-	TSC_hg19_v1_chr21_+_47063638 AK310131	165438	+	AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1##AK130835|COL18A1|80781|collagen, type XVIII, alpha 1##AF018082|COL18A1|80781|collagen, type XVIII, alpha 1##NM_130445|COL18A1|80781|collagen, type XVIII, alpha 1##BC063833|COL18A1|80781|collagen, type XVIII, alpha 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK310131|PCBP3|54039|poly(rC) binding protein 3	0.187925	
chr4	8244038	8244168	reg1013240.p1	10.014	+	TSC_hg19_v1_chr4_+_8201038 BC030283 AK074093 NM_018986 BC068094 AK074402 AK126165 BC131785	-43071	+	DQ413176 AJ748600 AJ748601 TSC_hg19_v1_chr4_-_8160541 BC122567 AK130044 AK094754 BC067214 NM_001130083 NM_001130084 NM_001130085 NM_001130086 NM_001130087 NM_001130088 NM_032432	-83569	-	TSC_hg19_v1_chr4_-_8129388 AK301060	-114718	-	TSC_hg19_v1_chr4_+_8271480 NM_053044 AY040094 BC034390 BC035717 AY280665 AY280666 AB528940 DQ891188 DQ894371	27472	+	TSC_hg19_v1_chr4_-_8430196 AK313242	186098	-	Y11411 BC017053 TSC_hg19_v1_chr4_-_8442447 AK225080 NM_001101667 NM_003501	198353	-	BC030283|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074093|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##NM_018986|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC068094|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074402|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK126165|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC131785|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##DQ413176|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748600|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748601|ABLIM2|84448|actin binding LIM protein family, member 2##BC122567|ABLIM2|84448|actin binding LIM protein family, member 2##AK130044|ABLIM2|84448|actin binding LIM protein family, member 2##AK094754|ABLIM2|84448|actin binding LIM protein family, member 2##BC067214|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130083|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130084|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130085|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130086|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130087|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130088|ABLIM2|84448|actin binding LIM protein family, member 2##NM_032432|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2##NM_053044|HTRA3|94031|HtrA serine peptidase 3##AY040094|HTRA3|94031|HtrA serine peptidase 3##BC034390|HTRA3|94031|HtrA serine peptidase 3##BC035717|HTRA3|94031|HtrA serine peptidase 3##AY280665|HTRA3|94031|HtrA serine peptidase 3##AY280666|HTRA3|94031|HtrA serine peptidase 3##DQ891188|HTRA3|94031|HtrA serine peptidase 3##DQ894371|HTRA3|94031|HtrA serine peptidase 3##AK313242|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##Y11411|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##BC017053|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK225080|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_001101667|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_003501|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl	0.999572	CTCF.p2:-17:1.000
chr9	34437481	34437626	reg1012427.p1	10.014	+	AK058087 BC022084 BC029484 NM_032596	-39736	-	AK225981 AF367474 TSC_hg19_v1_chr9_-_34381563 AK094751 NM_001252195 NM_147168 NM_147169	-56006	-	TSC_hg19_v1_chr9_-_34376864 BC070098 NM_020702	-60620	-	TSC_hg19_v1_chr9_-_34458569 AK299882 AK096350 AK123887 AK294054 BC041009 NM_001184940 NM_001184941 NM_001184942 NM_001184943 NM_001184945 NM_147202	20974	-	NM_012144 BC030583 AK290696 AF091619 AK314639 AK303937 AK302186 AK302499 DQ890609 EU176231	21353	+	TSC_hg19_v1_chr9_-_34522975 BC022101 NM_198573	85451	-	AK058087|C9orf24|84688|chromosome 9 open reading frame 24##BC022084|C9orf24|84688|chromosome 9 open reading frame 24##BC029484|C9orf24|84688|chromosome 9 open reading frame 24##NM_032596|C9orf24|84688|chromosome 9 open reading frame 24##AK225981|C9orf24|84688|chromosome 9 open reading frame 24##AF367474|C9orf24|84688|chromosome 9 open reading frame 24##AK094751|C9orf24|84688|chromosome 9 open reading frame 24##NM_001252195|C9orf24|84688|chromosome 9 open reading frame 24##NM_147168|C9orf24|84688|chromosome 9 open reading frame 24##NM_147169|C9orf24|84688|chromosome 9 open reading frame 24##BC070098|KIAA1161|57462|KIAA1161##NM_020702|KIAA1161|57462|KIAA1161##AK299882|C9orf25|203259|chromosome 9 open reading frame 25##AK096350|C9orf25|203259|chromosome 9 open reading frame 25##AK123887|C9orf25|203259|chromosome 9 open reading frame 25##AK294054|C9orf25|203259|chromosome 9 open reading frame 25##BC041009|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184940|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184941|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184942|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184943|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184945|C9orf25|203259|chromosome 9 open reading frame 25##NM_147202|C9orf25|203259|chromosome 9 open reading frame 25##NM_012144|DNAI1|27019|dynein, axonemal, intermediate chain 1##BC030583|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK290696|DNAI1|27019|dynein, axonemal, intermediate chain 1##AF091619|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK314639|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK303937|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK302186|DNAI1|27019|dynein, axonemal, intermediate chain 1##DQ890609|DNAI1|27019|dynein, axonemal, intermediate chain 1##EU176231|DNAI1|27019|dynein, axonemal, intermediate chain 1##BC022101|ENHO|375704|energy homeostasis associated##NM_198573|ENHO|375704|energy homeostasis associated	0.848295	CTCF.p2:-15:0.848
chrX	18396070	18396176	reg1018095.p1	10.014	+	Y18004 BC051913 TSC_hg19_v1_chrX_-_18372809 BC064617 AK303064 AK315116 BC040497 NM_006089	-23313	-	DQ892470 DQ895683 BC096745 BC037301 AK128155 NM_001184767 NM_153346	-157175	-	AK056214 AK298873 AK314631 NM_001172732 NM_001172739 NM_001172743 NM_021785	-516718	-	BC010966 TSC_hg19_v1_chrX_+_18443727 NM_003159 AK307444 AY217744 Y15057	47606	+	BC036091 NM_001037343	64220	+	AB464151 AF014459 DQ426892 NM_000330	294081	-	Y18004|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC051913|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC064617|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK303064|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK315116|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC040497|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##NM_006089|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##DQ892470|BEND2|139105|BEN domain containing 2##DQ895683|BEND2|139105|BEN domain containing 2##BC096745|BEND2|139105|BEN domain containing 2##BC037301|BEND2|139105|BEN domain containing 2##AK128155|BEND2|139105|BEN domain containing 2##NM_001184767|BEND2|139105|BEN domain containing 2##NM_153346|BEND2|139105|BEN domain containing 2##AK056214|RAI2|10742|retinoic acid induced 2##AK298873|RAI2|10742|retinoic acid induced 2##AK314631|RAI2|10742|retinoic acid induced 2##NM_001172732|RAI2|10742|retinoic acid induced 2##NM_001172739|RAI2|10742|retinoic acid induced 2##NM_001172743|RAI2|10742|retinoic acid induced 2##NM_021785|RAI2|10742|retinoic acid induced 2##BC010966|CDKL5|6792|cyclin-dependent kinase-like 5##NM_003159|CDKL5|6792|cyclin-dependent kinase-like 5##AK307444|CDKL5|6792|cyclin-dependent kinase-like 5##AY217744|CDKL5|6792|cyclin-dependent kinase-like 5##Y15057|CDKL5|6792|cyclin-dependent kinase-like 5##BC036091|CDKL5|6792|cyclin-dependent kinase-like 5##NM_001037343|CDKL5|6792|cyclin-dependent kinase-like 5##AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1	0.980273	CTCF.p2:-3:0.980
chr9	99204235	99204345	reg1012092.p1	10.013	+	TSC_hg19_v1_chr9_-_99180672 AY554164 AY554165 NM_153695	-23606	-	BC126141 TSC_hg19_v1_chr9_-_99180642	-23694	-	NM_007001 TSC_hg19_v1_chr9_-_99145994 BC113579	-58270	-	TSC_hg19_v1_chr9_+_99212450 NM_014282 BC018788 AF241831 AB463760	8179	+	TSC_hg19_v1_chr9_-_99329110 AK126388 NM_001077181	124857	-	TSC_hg19_v1_chr9_-_99382126 AF064104 AF064105 NM_003671 NM_033331	177830	-	AY554164|ZNF367|195828|zinc finger protein 367##AY554165|ZNF367|195828|zinc finger protein 367##NM_153695|ZNF367|195828|zinc finger protein 367##BC126141|ZNF367|195828|zinc finger protein 367##NM_007001|SLC35D2|11046|solute carrier family 35, member D2##BC113579|SLC35D2|11046|solute carrier family 35, member D2##NM_014282|HABP4|22927|hyaluronan binding protein 4##BC018788|HABP4|22927|hyaluronan binding protein 4##AF241831|HABP4|22927|hyaluronan binding protein 4##AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##AF064104|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##AF064105|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_003671|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_033331|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)	0.81763	CTCF.p2:1:0.818
chr12	89864657	89864774	reg1011834.p1	10.012	+	TSC_hg19_v1_chr12_-_89746275 BC037236 AK091753 AB189400 NM_001946 NM_022652	-118406	-	TSC_hg19_v1_chr12_-_89746238 BC005047	-118475	-	TSC_hg19_v1_chr12_-_89746181 BC003143 BC003562 AB013382 AB013602 X93920 AK222882	-118624	-	TSC_hg19_v1_chr12_-_89918537 AK312870 BC036390 NM_003774	53841	-	TSC_hg19_v1_chr12_-_89919208 AK123106 NM_001199777	54547	-	CU693124 TSC_hg19_v1_chr12_-_89919778 BX647258 AK074772 AK295596 BC026080 EF011619	55045	-	BC037236|DUSP6|1848|dual specificity phosphatase 6##AK091753|DUSP6|1848|dual specificity phosphatase 6##AB189400|DUSP6|1848|dual specificity phosphatase 6##NM_001946|DUSP6|1848|dual specificity phosphatase 6##NM_022652|DUSP6|1848|dual specificity phosphatase 6##BC005047|DUSP6|1848|dual specificity phosphatase 6##BC003143|DUSP6|1848|dual specificity phosphatase 6##BC003562|DUSP6|1848|dual specificity phosphatase 6##AB013382|DUSP6|1848|dual specificity phosphatase 6##AB013602|DUSP6|1848|dual specificity phosphatase 6##X93920|DUSP6|1848|dual specificity phosphatase 6##AK222882|DUSP6|1848|dual specificity phosphatase 6##AK312870|GALNT4|8693|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)##BC036390|GALNT4|8693|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)##NM_003774|GALNT4|8693|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)##AK123106|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##NM_001199777|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BX647258|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##AK074772|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK295596|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BC026080|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##EF011619|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)	0.316008	CTCF.p2:1:0.316
chr4	180228819	180228966	reg1011376.p1	10.012	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-1865249	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-1865299	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-1865351	-	TSC_hg19_v1_chr4_+_183065111 AK308489	2836233	+	NM_001080477 HE578284 HE578285	3016262	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	3609638	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.997503	CTCF.p2:3:0.998
chrUn_gl000212	81800	81908	reg1012634.p1	10.012	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.976242	CTCF.p2:-1:0.962
chr11	103196798	103196929	reg1013825.p1	10.011	+	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	-216664	+	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	-233940	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	-234122	-	NM_001001711 AF429971 AK093336 AX748060 BC022018 BC022017 BC021710 BC021172	710475	+	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	837931	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	838177	-	AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_001001711|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AF429971|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK093336|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022018|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022017|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021710|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021172|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D	0.193903	
chr16	31153825	31153933	reg1010697.p1	10.011	+	TSC_hg19_v1_chr16_-_31147088 NM_002773	-6773	-	TSC_hg19_v1_chr16_-_31147049 BC001462 AK309955 AK296656 AK301619 L41351	-6855	-	TSC_hg19_v1_chr16_+_31128984 AK225660 NM_032188 NM_182958 AK024102 AK291106 AK021872 BC037773 AB463911 AF217501 AF260665	-24850	+	TSC_hg19_v1_chr16_-_31160884 AK297997	6980	-	BC137396 BC144615 AJ627034 AK075142 AK301409 AK290310 NM_173502	7518	-	NM_001170634 NM_001170937 NM_004960 TSC_hg19_v1_chr16_+_31191456	37564	+	NM_002773|PRSS8|5652|protease, serine, 8##BC001462|PRSS8|5652|protease, serine, 8##AK296656|PRSS8|5652|protease, serine, 8##AK301619|PRSS8|5652|protease, serine, 8##L41351|PRSS8|5652|protease, serine, 8##AK225660|KAT8|84148|K(lysine) acetyltransferase 8##NM_032188|KAT8|84148|K(lysine) acetyltransferase 8##NM_182958|KAT8|84148|K(lysine) acetyltransferase 8##AK024102|KAT8|84148|K(lysine) acetyltransferase 8##AK291106|KAT8|84148|K(lysine) acetyltransferase 8##AK021872|KAT8|84148|K(lysine) acetyltransferase 8##BC037773|KAT8|84148|K(lysine) acetyltransferase 8##AF217501|KAT8|84148|K(lysine) acetyltransferase 8##AF260665|KAT8|84148|K(lysine) acetyltransferase 8##AK297997|PRSS36|146547|protease, serine, 36##BC137396|PRSS36|146547|protease, serine, 36##BC144615|PRSS36|146547|protease, serine, 36##AJ627034|PRSS36|146547|protease, serine, 36##AK075142|PRSS36|146547|protease, serine, 36##AK301409|PRSS36|146547|protease, serine, 36##AK290310|PRSS36|146547|protease, serine, 36##NM_173502|PRSS36|146547|protease, serine, 36##NM_001170634|FUS|2521|fused in sarcoma##NM_001170937|FUS|2521|fused in sarcoma##NM_004960|FUS|2521|fused in sarcoma	0.999088	CTCF.p2:7:0.999
chr22	17392362	17392475	reg1012824.p1	10.011	+	BC137521 BC137522 BC144679 AY989815 AK098608 AY534240 BC045548 NM_175878	-89849	-	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	-318849	-	NM_001005239	-942615	-	AB076978 NM_001037814	96693	-	TSC_hg19_v1_chr22_+_17565850 NM_014339	173433	+	TSC_hg19_v1_chr22_+_17565906 BC011624	173484	+	BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_001005239|OR11H1|81061|olfactory receptor, family 11, subfamily H, member 1##AB076978|GAB4|128954|GRB2-associated binding protein family, member 4##NM_001037814|GAB4|128954|GRB2-associated binding protein family, member 4##NM_014339|IL17RA|23765|interleukin 17 receptor A##BC011624|IL17RA|23765|interleukin 17 receptor A	0.829185	CTCF.p2:13:0.829
chr2	226525293	226525400	reg1011222.p1	10.011	+	NM_020864 BC131727 AB040919	-259701	+	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	-617998	-	TSC_hg19_v1_chr2_-_225811768 EU236710	-713592	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	1138133	-	TSC_hg19_v1_chr2_-_227664534 S62539	1139153	-	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	1175384	+	NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##EU236710|DOCK10|55619|dedicator of cytokinesis 10##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##S62539|IRS1|3667|insulin receptor substrate 1##NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1	0.888056	CTCF.p2:19:0.888
chr4	38732856	38733001	reg1011522.p2	10.010	+	AF289565 TSC_hg19_v1_chr4_-_38666549	-66439	-	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	-67102	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-753911	+	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	51671	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	73491	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	125500	-	AF289565|FLJ13197|79667|uncharacterized FLJ13197##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6	0.995117	CTCF.p2:5:0.995
chr3	66872849	66872953	reg1009165.p2	10.009	+	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	-321437	-	AF381545 BC140907 NM_015541 AY730707	-322049	-	TSC_hg19_v1_chr3_+_66444897 AB075504	-427942	+	NM_032505 AK096640 AK300397	175827	+	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	832161	-	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	832249	+	AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit	0.490519	CTCF.p2:-4:0.491
chr3	149286899	149287005	reg1010857.p1	10.008	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-94463	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-94550	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-191410	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	88783	-	AK022036 NM_001168278	134107	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	183287	-	AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2	0.999856	CTCF.p2:-20:1.000
chr6	161814986	161815129	reg1013677.p1	10.008	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	-119997	-	AK094629 TSC_hg19_v1_chr6_-_161413451	-401644	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-402199	+	AK057286 NM_001080378 NM_152410 BC044227	1333112	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	1333670	-	TSC_hg19_v1_chr6_-_163148797 AB245403 AK292590 BC022014	1333721	-	AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB245403|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AK292590|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##BC022014|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.997729	CTCF.p2:-26:0.998
chr10	82010303	82010410	reg1012063.p1	10.007	+	TSC_hg19_v1_chr10_-_81965334 AK056107	-44974	-	AJ278463 AJ278464 AJ278465 AK000567 NM_001157 NM_145868 NM_145869 TSC_hg19_v1_chr10_-_81965329	-45027	-	TSC_hg19_v1_chr10_-_81965293 AK301047	-45054	-	DQ891073 DQ894256 D49357 X69078 AK290820 BC018359 TSC_hg19_v1_chr10_-_82049413 NM_000429	38949	-	BC019250 NM_138812 AK125908 AK292542	106148	-	AK093378 AX748088 NM_032372	106201	+	AK056107|ANXA11|311|annexin A11##AJ278463|ANXA11|311|annexin A11##AJ278464|ANXA11|311|annexin A11##AJ278465|ANXA11|311|annexin A11##AK000567|ANXA11|311|annexin A11##NM_001157|ANXA11|311|annexin A11##NM_145868|ANXA11|311|annexin A11##NM_145869|ANXA11|311|annexin A11##AK301047|ANXA11|311|annexin A11##DQ891073|MAT1A|4143|methionine adenosyltransferase I, alpha##DQ894256|MAT1A|4143|methionine adenosyltransferase I, alpha##D49357|MAT1A|4143|methionine adenosyltransferase I, alpha##X69078|MAT1A|4143|methionine adenosyltransferase I, alpha##AK290820|MAT1A|4143|methionine adenosyltransferase I, alpha##BC018359|MAT1A|4143|methionine adenosyltransferase I, alpha##NM_000429|MAT1A|4143|methionine adenosyltransferase I, alpha##BC019250|DYDC1|143241|DPY30 domain containing 1##NM_138812|DYDC1|143241|DPY30 domain containing 1##AK125908|DYDC1|143241|DPY30 domain containing 1##AK292542|DYDC1|143241|DPY30 domain containing 1##AK093378|DYDC2|84332|DPY30 domain containing 2##NM_032372|DYDC2|84332|DPY30 domain containing 2	0.979768	CTCF.p2:-1:0.980
chr4	40319250	40319375	reg1010799.p2	10.007	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-120671	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-260780	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-339719	-	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	18133	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	197272	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	198646	-	NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47	0.065034	
chr7	7464152	7464301	reg1013639.p1	10.006	+	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	-241979	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-598328	-	AK296026 CU679629 AK000993 TSC_hg19_v1_chr7_-_6865849	-598388	-	BC136892 BC144431 AJ890451 NM_001037763	111228	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	142362	+	TSC_hg19_v1_chr7_+_7606667 AK294561	142460	+	NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK296026|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK000993|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##AK294561|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)	0.753998	CTCF.p2:-8:0.754
chr8	138346993	138347119	reg1010827.p2	10.006	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-1876855	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-1877398	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-2621782	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	1162050	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	1579188	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	2368226	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.226248	
chr10	61968581	61968679	reg1010467.p1	10.005	+	AK292927 AK092527 NM_001149	-67914	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-302306	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	-302429	-	U13616 NM_020987	180930	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	364060	-	EU832293 EU832377 AK172736 BX537917 TSC_hg19_v1_chr10_-_62493273 BX648574	524547	-	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##S72869|CCDC6|8030|coiled-coil domain containing 6##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832293|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832377|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX537917|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX648574|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.727131	CTCF.p2:2:0.727
chr12	45782469	45782585	reg1011134.p2	10.005	+	AL832340 NM_001142678	-96062	+	TSC_hg19_v1_chr12_+_45609916 BC098410	-172620	+	TSC_hg19_v1_chr12_+_45609867 AK302819 NM_001142680	-172656	+	TSC_hg19_v1_chr12_-_46121280 BC037237 BC008245	338746	-	TSC_hg19_v1_chr12_-_46121531 BC047417	339003	-	TSC_hg19_v1_chr12_+_46123488 AK127872	340956	+	AL832340|ANO6|196527|anoctamin 6##NM_001142678|ANO6|196527|anoctamin 6##BC098410|ANO6|196527|anoctamin 6##AK302819|ANO6|196527|anoctamin 6##NM_001142680|ANO6|196527|anoctamin 6##BC037237|LOC400027|400027|uncharacterized LOC400027##BC008245|LOC400027|400027|uncharacterized LOC400027##BC047417|LOC400027|400027|uncharacterized LOC400027##AK127872|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)	0.681375	CTCF.p2:5:0.681
chr20	16742003	16742126	reg1011416.p1	10.005	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	-13043	+	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	-31401	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	-188051	-	BC040546 NM_001201528	464687	+	NM_001201529 NM_002594 TSC_hg19_v1_chr20_+_17207617	465546	+	BC001905 TSC_hg19_v1_chr20_+_17207673	465607	+	BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##BC040546|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201528|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201529|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	0.055022	
chr10	95242426	95242526	reg1010807.p1	10.004	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	-428	-	AK075374 NM_000783 AF005418	-408820	+	AK027560 NM_057157	-409245	+	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	13912	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	84033	+	X00129 TSC_hg19_v1_chr10_-_95360993 BC020633 NM_006744	118502	-	AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1##X00129|RBP4|5950|retinol binding protein 4, plasma##BC020633|RBP4|5950|retinol binding protein 4, plasma##NM_006744|RBP4|5950|retinol binding protein 4, plasma	0.0	
chr11	124663699	124663826	reg1013341.p1	10.004	+	CU677755 DQ891768 DQ894952 BC016868 TSC_hg19_v1_chr11_-_124632187 AF361746 AY358382 AK075396 AK301160 AK314710 NM_138961	-31626	-	AY358897 TSC_hg19_v1_chr11_-_124622152 BC012567	-41611	-	TSC_hg19_v1_chr11_-_124622090 AK000460 BC007313 NM_014312	-41666	-	TSC_hg19_v1_chr11_-_124670282 AK303902	6507	-	TSC_hg19_v1_chr11_-_124670286 BC064919 AK026995 NM_024631	6557	-	AY509035 TSC_hg19_v1_chr11_+_124735327 AK056544 NM_022370 AK291045	71563	+	DQ891768|ESAM|90952|endothelial cell adhesion molecule##DQ894952|ESAM|90952|endothelial cell adhesion molecule##BC016868|ESAM|90952|endothelial cell adhesion molecule##AF361746|ESAM|90952|endothelial cell adhesion molecule##AY358382|ESAM|90952|endothelial cell adhesion molecule##AK075396|ESAM|90952|endothelial cell adhesion molecule##AK301160|ESAM|90952|endothelial cell adhesion molecule##AK314710|ESAM|90952|endothelial cell adhesion molecule##NM_138961|ESAM|90952|endothelial cell adhesion molecule##AY358897|VSIG2|23584|V-set and immunoglobulin domain containing 2##BC012567|VSIG2|23584|V-set and immunoglobulin domain containing 2##AK000460|VSIG2|23584|V-set and immunoglobulin domain containing 2##BC007313|VSIG2|23584|V-set and immunoglobulin domain containing 2##NM_014312|VSIG2|23584|V-set and immunoglobulin domain containing 2##AK303902|C11orf61|79684|chromosome 11 open reading frame 61##BC064919|C11orf61|79684|chromosome 11 open reading frame 61##AK026995|C11orf61|79684|chromosome 11 open reading frame 61##NM_024631|C11orf61|79684|chromosome 11 open reading frame 61##AY509035|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##NM_022370|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK291045|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)	0.984207	CTCF.p2:13:0.491	CTCF.p2:-87:0.493
chr15	20398392	20398529	reg1011646.p1	10.004	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	312977	-	NM_001145004	348653	-	NM_207355 BC066981	673518	-	BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B	0.980009	CTCF.p2:7:0.980
chr15	82573736	82573863	reg1010750.p1	10.004	+	TSC_hg19_v1_chr15_+_82555158 AL833762 NM_001008226 BC144647 AK304339	-18646	+	TSC_hg19_v1_chr15_-_82555076 NM_001040610 NM_024580	-18710	-	BC014628 TSC_hg19_v1_chr15_-_82555043 AK300348 AK056656 BX538332	-18768	-	NM_001164465	67906	-	TSC_hg19_v1_chr15_+_82647308 BC066934	73532	+	NM_198181 CR936812	148417	+	AL833762|FAM154B|283726|family with sequence similarity 154, member B##NM_001008226|FAM154B|283726|family with sequence similarity 154, member B##AK304339|FAM154B|283726|family with sequence similarity 154, member B##NM_001040610|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_024580|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BC014628|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK300348|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK056656|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BX538332|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9	0.6704	CTCF.p2:4:0.670
chr16	11351233	11351352	reg1009980.p1	10.004	+	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	-1242	-	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-312849	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-315057	-	X63758 BC096135 BC096136 BC096137 NM_005425	11846	-	NM_021247	16159	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	19028	-	AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2	0.854464	CTCF.p2:20:0.854
chr16	30016928	30017076	reg1011582.p1	10.004	+	TSC_hg19_v1_chr16_+_30007570 AK309498 BC047712 BC035693 AY189289 AB590065 CU690476	-9406	+	TSC_hg19_v1_chr16_+_30007561 AK075133 NM_173618 AK130409 AK074137	-9471	+	AJ223351 BC000588 TSC_hg19_v1_chr16_-_30007413 AK075145 NM_001197323 NM_003609	-9606	-	TSC_hg19_v1_chr16_-_30022300 AK293651 BC055284 NM_003586	5348	-	AK058133 BC101433 BC101434 BC101435 BC101436 BC127955 NM_001109659 NM_001109660	17652	+	AB593090 AB593089 AF370365 NM_031478	25152	-	AK309498|INO80E|283899|INO80 complex subunit E##BC047712|INO80E|283899|INO80 complex subunit E##BC035693|INO80E|283899|INO80 complex subunit E##AY189289|INO80E|283899|INO80 complex subunit E##AK075133|INO80E|283899|INO80 complex subunit E##NM_173618|INO80E|283899|INO80 complex subunit E##AK130409|INO80E|283899|INO80 complex subunit E##AK074137|INO80E|283899|INO80 complex subunit E##AJ223351|HIRIP3|8479|HIRA interacting protein 3##BC000588|HIRIP3|8479|HIRA interacting protein 3##AK075145|HIRIP3|8479|HIRA interacting protein 3##NM_001197323|HIRIP3|8479|HIRA interacting protein 3##NM_003609|HIRIP3|8479|HIRA interacting protein 3##AK293651|DOC2A|8448|double C2-like domains, alpha##BC055284|DOC2A|8448|double C2-like domains, alpha##NM_003586|DOC2A|8448|double C2-like domains, alpha##AK058133|C16orf92|146378|chromosome 16 open reading frame 92##BC101433|C16orf92|146378|chromosome 16 open reading frame 92##BC101434|C16orf92|146378|chromosome 16 open reading frame 92##BC101435|C16orf92|146378|chromosome 16 open reading frame 92##BC101436|C16orf92|146378|chromosome 16 open reading frame 92##BC127955|C16orf92|146378|chromosome 16 open reading frame 92##NM_001109659|C16orf92|146378|chromosome 16 open reading frame 92##NM_001109660|C16orf92|146378|chromosome 16 open reading frame 92##AB593090|FAM57B|83723|family with sequence similarity 57, member B##AB593089|FAM57B|83723|family with sequence similarity 57, member B##AF370365|FAM57B|83723|family with sequence similarity 57, member B##NM_031478|FAM57B|83723|family with sequence similarity 57, member B	0.913235	CTCF.p2:6:0.902
chr17	55017383	55017497	reg1011388.p2	10.004	+	TSC_hg19_v1_chr17_-_54991410 NM_005082	-26035	-	AB384815 TSC_hg19_v1_chr17_-_54991388 D21205 AB208994 BC016924 BC042541	-26068	-	TSC_hg19_v1_chr17_+_54911515 NM_003647 BC022297 AK310668 AK293039 U49379	-105936	+	CU679689 DQ892927 DQ896176 TSC_hg19_v1_chr17_-_55038404 AK313616 U06632 BC010385 NM_004645	20961	-	NM_021626 TSC_hg19_v1_chr17_+_55055513 AY358559 AF282618 AK027373 BC010078 AK298161 CU687218 BC072405 AF113214	38064	+	TSC_hg19_v1_chr17_+_55162639 NM_003488 BC000729 X97335	145174	+	NM_005082|TRIM25|7706|tripartite motif containing 25##D21205|TRIM25|7706|tripartite motif containing 25##AB208994|TRIM25|7706|tripartite motif containing 25##BC016924|TRIM25|7706|tripartite motif containing 25##BC042541|TRIM25|7706|tripartite motif containing 25##NM_003647|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##BC022297|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##AK310668|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##AK293039|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##U49379|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##DQ892927|COIL|8161|coilin##DQ896176|COIL|8161|coilin##AK313616|COIL|8161|coilin##U06632|COIL|8161|coilin##BC010385|COIL|8161|coilin##NM_004645|COIL|8161|coilin##NM_021626|SCPEP1|59342|serine carboxypeptidase 1##AY358559|SCPEP1|59342|serine carboxypeptidase 1##AF282618|SCPEP1|59342|serine carboxypeptidase 1##AK027373|SCPEP1|59342|serine carboxypeptidase 1##BC010078|SCPEP1|59342|serine carboxypeptidase 1##AK298161|SCPEP1|59342|serine carboxypeptidase 1##BC072405|SCPEP1|59342|serine carboxypeptidase 1##AF113214|SCPEP1|59342|serine carboxypeptidase 1##NM_003488|AKAP1|8165|A kinase (PRKA) anchor protein 1##BC000729|AKAP1|8165|A kinase (PRKA) anchor protein 1##X97335|AKAP1|8165|A kinase (PRKA) anchor protein 1	0.478688	CTCF.p2:4:0.479
chr20	5203717	5203843	reg1012308.p1	10.004	+	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-96085	+	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	-96258	+	AK300558 AK311014 NM_002592	-96554	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	91256	-	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	387807	-	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	527286	+	AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK300558|PCNA|5111|proliferating cell nuclear antigen##NM_002592|PCNA|5111|proliferating cell nuclear antigen##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196	0.858712	CTCF.p2:14:0.859
chr22	36617963	36618074	reg1011067.p1	10.004	+	AK290466 BC006276 AK313637 AK311506 AY014914 AY014915 NM_030643 NM_145660	-17200	-	AY014906 AY014907 NM_145641 NM_145642	-55794	-	BC042918 BC038352 AK025349 AF070675 BC070144 AF305227 BC050596 AY014902 AY014903 AY014904 AY014905 NM_145640	-61140	-	AF305429 TSC_hg19_v1_chr22_-_36635617 BC004395 AF305225 AK303978 AB208990 AK056938	17573	-	TSC_hg19_v1_chr22_-_36635666 AF324223 NM_030882	17659	-	AF324224 NM_145637	17981	-	AK290466|APOL4|80832|apolipoprotein L, 4##BC006276|APOL4|80832|apolipoprotein L, 4##AK313637|APOL4|80832|apolipoprotein L, 4##AK311506|APOL4|80832|apolipoprotein L, 4##AY014914|APOL4|80832|apolipoprotein L, 4##AY014915|APOL4|80832|apolipoprotein L, 4##NM_030643|APOL4|80832|apolipoprotein L, 4##NM_145660|APOL4|80832|apolipoprotein L, 4##AY014906|APOL3|80833|apolipoprotein L, 3##AY014907|APOL3|80833|apolipoprotein L, 3##NM_145641|APOL3|80833|apolipoprotein L, 3##NM_145642|APOL3|80833|apolipoprotein L, 3##BC042918|APOL3|80833|apolipoprotein L, 3##BC038352|APOL3|80833|apolipoprotein L, 3##AK025349|APOL3|80833|apolipoprotein L, 3##AF070675|APOL3|80833|apolipoprotein L, 3##AF305227|APOL3|80833|apolipoprotein L, 3##BC050596|APOL3|80833|apolipoprotein L, 3##AY014902|APOL3|80833|apolipoprotein L, 3##AY014903|APOL3|80833|apolipoprotein L, 3##AY014904|APOL3|80833|apolipoprotein L, 3##AY014905|APOL3|80833|apolipoprotein L, 3##NM_145640|APOL3|80833|apolipoprotein L, 3##AF305429|APOL2|23780|apolipoprotein L, 2##BC004395|APOL2|23780|apolipoprotein L, 2##AF305225|APOL2|23780|apolipoprotein L, 2##AK303978|APOL2|23780|apolipoprotein L, 2##AB208990|APOL2|23780|apolipoprotein L, 2##AK056938|APOL2|23780|apolipoprotein L, 2##AF324223|APOL2|23780|apolipoprotein L, 2##NM_030882|APOL2|23780|apolipoprotein L, 2##AF324224|APOL2|23780|apolipoprotein L, 2##NM_145637|APOL2|23780|apolipoprotein L, 2	0.998616	CTCF.p2:7:0.999
chr11	112668820	112668913	reg1011163.p1	10.003	+	AY364435 NM_001145024	-537284	-	TSC_hg19_v1_chr11_+_112097100 NM_000317 BC018029 D17400 AK310768 BC009686 AK307133 M97655 AM392676 AM393300 AM393668 DQ890961 DQ894133	-571739	+	NM_001037290 AK027801 AK297853 AB096252	-621761	+	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 TSC_hg19_v1_chr11_+_112831996 AK314589	163121	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	163265	+	X16841 TSC_hg19_v1_chr11_+_112832212	163340	+	AY364435|C11orf34|349633|chromosome 11 open reading frame 34##NM_001145024|C11orf34|349633|chromosome 11 open reading frame 34##NM_000317|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC018029|PTS|5805|6-pyruvoyltetrahydropterin synthase##D17400|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK310768|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC009686|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK307133|PTS|5805|6-pyruvoyltetrahydropterin synthase##M97655|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM392676|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393300|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393668|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ890961|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ894133|PTS|5805|6-pyruvoyltetrahydropterin synthase##NM_001037290|BCO2|83875|beta-carotene oxygenase 2##AK027801|BCO2|83875|beta-carotene oxygenase 2##AK297853|BCO2|83875|beta-carotene oxygenase 2##AB096252|BCO2|83875|beta-carotene oxygenase 2##NM_000615|NCAM1|4684|neural cell adhesion molecule 1##NM_001076682|NCAM1|4684|neural cell adhesion molecule 1##NM_001242607|NCAM1|4684|neural cell adhesion molecule 1##NM_001242608|NCAM1|4684|neural cell adhesion molecule 1##NM_181351|NCAM1|4684|neural cell adhesion molecule 1##AK314589|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1	0.873524	CTCF.p2:-32:0.874
chr5	101313570	101313701	reg1013579.p1	10.003	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-1074707	-	AF529367 TSC_hg19_v1_chr5_+_99871306	-1442365	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-1442562	+	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	318473	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	520998	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	887895	+	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase	0.986777	CTCF.p2:8:0.987
chr8	143820955	143821057	reg1012451.p4	10.003	+	TSC_hg19_v1_chr8_+_143808691 BC001311 NM_016647 AK301564 AK315614 AF242773 BC019104 AK075407	-12345	+	TSC_hg19_v1_chr8_-_143808427 CR627188	-12584	-	TSC_hg19_v1_chr8_+_143781527 NM_001160354 NM_001160355 NM_017527 AJ001348	-39475	+	BC105135 BC105133 AY579079 AY579080 BC069292 NM_020427	2819	-	AB593150 TSC_hg19_v1_chr8_-_143833928 AK290331 BC119019 BC119812 AY358432 NM_205545	12931	-	AY587277 AB081838 NM_177458 AY358417	30236	-	BC001311|C8orf55|51337|chromosome 8 open reading frame 55##NM_016647|C8orf55|51337|chromosome 8 open reading frame 55##AK315614|C8orf55|51337|chromosome 8 open reading frame 55##AF242773|C8orf55|51337|chromosome 8 open reading frame 55##BC019104|C8orf55|51337|chromosome 8 open reading frame 55##AK075407|C8orf55|51337|chromosome 8 open reading frame 55##CR627188|LOC100288181|100288181|uncharacterized LOC100288181##NM_001160354|LY6K|54742|lymphocyte antigen 6 complex, locus K##NM_001160355|LY6K|54742|lymphocyte antigen 6 complex, locus K##NM_017527|LY6K|54742|lymphocyte antigen 6 complex, locus K##AJ001348|LY6K|54742|lymphocyte antigen 6 complex, locus K##BC105135|SLURP1|57152|secreted LY6/PLAUR domain containing 1##BC105133|SLURP1|57152|secreted LY6/PLAUR domain containing 1##AY579079|SLURP1|57152|secreted LY6/PLAUR domain containing 1##AY579080|SLURP1|57152|secreted LY6/PLAUR domain containing 1##BC069292|SLURP1|57152|secreted LY6/PLAUR domain containing 1##NM_020427|SLURP1|57152|secreted LY6/PLAUR domain containing 1##AB593150|LYPD2|137797|LY6/PLAUR domain containing 2##AK290331|LYPD2|137797|LY6/PLAUR domain containing 2##BC119019|LYPD2|137797|LY6/PLAUR domain containing 2##BC119812|LYPD2|137797|LY6/PLAUR domain containing 2##AY358432|LYPD2|137797|LY6/PLAUR domain containing 2##NM_205545|LYPD2|137797|LY6/PLAUR domain containing 2##AY587277|LYNX1|66004|Ly6/neurotoxin 1##AB081838|LYNX1|66004|Ly6/neurotoxin 1##NM_177458|LYNX1|66004|Ly6/neurotoxin 1##AY358417|LYNX1|66004|Ly6/neurotoxin 1	0.998529	CTCF.p2:0:0.999
chr2	112240798	112240935	reg1015224.p1	10.002	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-362379	+	AK300513 NM_001142807 BC022268	-750687	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-805044	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	400760	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	400895	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	415319	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.0	
chr4	9766887	9767009	reg1011626.p2	10.002	+	AF529414 NM_001040448	-320689	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-402095	+	AF544012 BC100991 NM_001105662	-406840	+	NM_000798	16309	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	256176	-	AK310895 BC018897 NM_001001290 AK096819	274974	-	AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF544012|USP17|391627|ubiquitin specific peptidase 17##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_000798|DRD5|1816|dopamine receptor D5##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.0	
chr1	179784010	179784132	reg1011602.p1	10.001	+	AK313887 TSC_hg19_v1_chr1_+_179712524	-71555	+	TSC_hg19_v1_chr1_+_179712425 AK310711	-71647	+	AY902195 BC009382 NM_173509 TSC_hg19_v1_chr1_+_179712397	-71720	+	TSC_hg19_v1_chr1_-_179833583 AK021454	49513	-	BC065285 TSC_hg19_v1_chr1_-_179846939 AK057623 AK289793 BC024226 AF464140 BC094724 NM_001199260 NM_022347 NM_145034	62857	-	AK001780 TSC_hg19_v1_chr1_+_179851431 NM_015602	67412	+	AK313887|FAM163A|148753|family with sequence similarity 163, member A##AK310711|FAM163A|148753|family with sequence similarity 163, member A##AY902195|FAM163A|148753|family with sequence similarity 163, member A##BC009382|FAM163A|148753|family with sequence similarity 163, member A##NM_173509|FAM163A|148753|family with sequence similarity 163, member A##AK057623|TOR1AIP2|163590|torsin A interacting protein 2##AK289793|TOR1AIP2|163590|torsin A interacting protein 2##AF464140|TOR1AIP2|163590|torsin A interacting protein 2##BC094724|TOR1AIP2|163590|torsin A interacting protein 2##NM_001199260|TOR1AIP2|163590|torsin A interacting protein 2##NM_022347|TOR1AIP2|163590|torsin A interacting protein 2##NM_145034|TOR1AIP2|163590|torsin A interacting protein 2##AK001780|TOR1AIP1|26092|torsin A interacting protein 1##NM_015602|TOR1AIP1|26092|torsin A interacting protein 1	0.999311	CTCF.p2:10:0.999
chr17	73511921	73512056	reg1012253.p1	10.001	+	BC066643 NM_020753 TSC_hg19_v1_chr17_-_73511632	-349	-	TSC_hg19_v1_chr17_-_73511556 AF451976 BC032359	-453	-	AK300354 NM_001142643 AK315936	-6047	-	TSC_hg19_v1_chr17_+_73512608 NM_207346 AK094466 BC045551 BC053643 BC047793 CU690512	626	+	TSC_hg19_v1_chr17_+_73521798 NM_001015002 NM_001031803 NM_004524 BC010879 BC006503 X87342 BC067840 BC064994 BC080595	9808	+	TSC_hg19_v1_chr17_+_73553885 AK126687	41897	+	BC066643|CASKIN2|57513|CASK interacting protein 2##NM_020753|CASKIN2|57513|CASK interacting protein 2##AF451976|CASKIN2|57513|CASK interacting protein 2##BC032359|CASKIN2|57513|CASK interacting protein 2##AK300354|CASKIN2|57513|CASK interacting protein 2##NM_001142643|CASKIN2|57513|CASK interacting protein 2##AK315936|CASKIN2|57513|CASK interacting protein 2##NM_207346|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##AK094466|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC045551|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC053643|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC047793|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##NM_001015002|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_001031803|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_004524|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC010879|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC006503|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##X87342|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC067840|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC064994|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##AK126687|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)	0.972565	CTCF.p2:7:0.886
chr5	6526201	6526320	reg1013281.p1	10.001	+	TSC_hg19_v1_chr5_+_6449114 AK057805	-77071	+	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	-77407	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	-147610	-	TSC_hg19_v1_chr5_-_6633158 AK291144 BC137083 AK298980	106894	-	TSC_hg19_v1_chr5_-_6633411 AK055456 AB255451 NM_001193455 NM_017755	107149	-	NM_001047 TSC_hg19_v1_chr5_+_6633508	107250	+	AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##AK291144|NSUN2|54888|NOP2/Sun domain family, member 2##BC137083|NSUN2|54888|NOP2/Sun domain family, member 2##AK298980|NSUN2|54888|NOP2/Sun domain family, member 2##AK055456|NSUN2|54888|NOP2/Sun domain family, member 2##AB255451|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001193455|NSUN2|54888|NOP2/Sun domain family, member 2##NM_017755|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001047|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)	0.936345	CTCF.p2:4:0.936
chr10	99436565	99436692	reg1011392.p1	10.000	+	TSC_hg19_v1_chr10_+_99400490 BC003167 DQ893537 DQ893758 BT007330	-36144	+	TSC_hg19_v1_chr10_+_99400444 AJ303098 NM_018425	-36186	+	BC010230 BC040015 AJ431726 NM_001098831	-42747	-	TSC_hg19_v1_chr10_-_99446983 AK223099 AF218019 AK024533 AK222493 AF131791 NM_021732 AF241786 AY505173	10401	-	TSC_hg19_v1_chr10_+_99473461 NM_031484	36836	+	BC062544 BC004995 TSC_hg19_v1_chr10_+_99473485 AF325259	36853	+	BC003167|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##DQ893537|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##DQ893758|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##BT007330|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##AJ303098|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##NM_018425|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##BC010230|MORN4|118812|MORN repeat containing 4##BC040015|MORN4|118812|MORN repeat containing 4##AJ431726|MORN4|118812|MORN repeat containing 4##NM_001098831|MORN4|118812|MORN repeat containing 4##AK223099|AVPI1|60370|arginine vasopressin-induced 1##AF218019|AVPI1|60370|arginine vasopressin-induced 1##AK024533|AVPI1|60370|arginine vasopressin-induced 1##AK222493|AVPI1|60370|arginine vasopressin-induced 1##AF131791|AVPI1|60370|arginine vasopressin-induced 1##NM_021732|AVPI1|60370|arginine vasopressin-induced 1##AF241786|AVPI1|60370|arginine vasopressin-induced 1##NM_031484|MARVELD1|83742|MARVEL domain containing 1##BC062544|MARVELD1|83742|MARVEL domain containing 1##BC004995|MARVELD1|83742|MARVEL domain containing 1##AF325259|MARVELD1|83742|MARVEL domain containing 1	0.999936	CTCF.p2:-20:1.000
chr1	183624761	183624862	reg1010116.p1	10.000	+	BC021711 NM_203454 AK098557	-2363	-	NM_015149 AF186780 BX537416 AK316526 AK295179 AK295611 BC136591	-19469	+	TSC_hg19_v1_chr1_-_183604891 BC057237 NM_005717 BC071857	-19871	-	AK311716 TSC_hg19_v1_chr1_+_183774253 AF186779 AB023176 AK304293 BC039250 AK309237 AK311701	149480	+	AB385353 CU690156 AK293973 TSC_hg19_v1_chr1_-_184006634	381754	-	AB011156 AF288389 NM_015101 BC035672 AK095192 TSC_hg19_v1_chr1_-_184006893	382053	-	BC021711|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##NM_203454|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##AK098557|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC057237|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##NM_005717|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##BC071857|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK293973|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AB011156|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AF288389|GLT25D2|23127|glycosyltransferase 25 domain containing 2##NM_015101|GLT25D2|23127|glycosyltransferase 25 domain containing 2##BC035672|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AK095192|GLT25D2|23127|glycosyltransferase 25 domain containing 2	0.999826	CTCF.p2:-8:1.000
chr12	52417593	52417739	reg1013556.p1	10.000	+	AK297526 NM_001202233	-1051	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	-16925	+	AK299496 NM_020327	-70503	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	27550	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	46088	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	46132	+	AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44	0.99567	CTCF.p2:-11:0.996
chr2	189959154	189959268	reg1011791.p1	10.000	+	TSC_hg19_v1_chr2_+_189839133 AB384877 X07240	-120038	+	X14420 BX649097 TSC_hg19_v1_chr2_+_189839117	-120093	+	TSC_hg19_v1_chr2_+_189839098 AK308010 NM_000090 BC028178	-120117	+	AB384824 J04478 Y14690 AB209045 BC086874 AK297936 TSC_hg19_v1_chr2_-_190044488 AK300146 M31365 NM_000393	85256	-	BC040567 NM_032168 TSC_hg19_v1_chr2_+_190306177	346959	+	TSC_hg19_v1_chr2_+_190306204 AK022607 AK290445 CR749440 AK022581 AK091546 AX747050	346998	+	X07240|COL3A1|1281|collagen, type III, alpha 1##X14420|COL3A1|1281|collagen, type III, alpha 1##AK308010|COL3A1|1281|collagen, type III, alpha 1##NM_000090|COL3A1|1281|collagen, type III, alpha 1##BC028178|COL3A1|1281|collagen, type III, alpha 1##J04478|COL5A2|1290|collagen, type V, alpha 2##Y14690|COL5A2|1290|collagen, type V, alpha 2##AB209045|COL5A2|1290|collagen, type V, alpha 2##BC086874|COL5A2|1290|collagen, type V, alpha 2##AK297936|COL5A2|1290|collagen, type V, alpha 2##AK300146|COL5A2|1290|collagen, type V, alpha 2##M31365|COL5A2|1290|collagen, type V, alpha 2##NM_000393|COL5A2|1290|collagen, type V, alpha 2##BC040567|WDR75|84128|WD repeat domain 75##NM_032168|WDR75|84128|WD repeat domain 75##AK022607|WDR75|84128|WD repeat domain 75##AK290445|WDR75|84128|WD repeat domain 75##CR749440|WDR75|84128|WD repeat domain 75##AK022581|WDR75|84128|WD repeat domain 75##AK091546|WDR75|84128|WD repeat domain 75	0.997935	CTCF.p2:3:0.998
chr2	191917009	191917165	reg1011299.p1	9.999	+	TSC_hg19_v1_chr2_-_191878927 AK225853 NM_007315 NM_139266	-38136	-	TSC_hg19_v1_chr2_-_191878916 AK096686	-38173	-	TSC_hg19_v1_chr2_-_191878883 AK315002 BC002704	-38193	-	AK299976 TSC_hg19_v1_chr2_-_192015721	98626	-	TSC_hg19_v1_chr2_-_192015734 AK300868 BC016694	98649	-	L78440 TSC_hg19_v1_chr2_-_192015772 AK301172	98682	-	AK225853|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##NM_007315|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##NM_139266|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##AK096686|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##AK315002|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##BC002704|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##AK299976|STAT4|6775|signal transducer and activator of transcription 4##AK300868|STAT4|6775|signal transducer and activator of transcription 4##BC016694|STAT4|6775|signal transducer and activator of transcription 4##L78440|STAT4|6775|signal transducer and activator of transcription 4##AK301172|STAT4|6775|signal transducer and activator of transcription 4	0.751325	CTCF.p2:-15:0.751
chr4	74207232	74207340	reg1011883.p1	9.999	+	TSC_hg19_v1_chr4_-_74124513 BC043394 BC004173 AF308285 NM_032217 NM_198889 AK307581	-82801	-	TSC_hg19_v1_chr4_-_74124365 AB527094	-82927	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	-118507	-	NM_000477 TSC_hg19_v1_chr4_+_74270005 AK292755 AK298461 AK308044 AK314794 BC034023 BC035969 BC036003 BC041789 AK298437 BC034026 BC039235 CR749331 V00494 AF542069 AY960291 AY358313 DQ986150 AY544124 AY550967 DQ891414 DQ894588 AF190168 AY728024 CU690238	62721	+	HQ537426 TSC_hg19_v1_chr4_+_74270841	63551	+	TSC_hg19_v1_chr4_+_74281884 BC014308	74659	+	BC043394|ANKRD17|26057|ankyrin repeat domain 17##BC004173|ANKRD17|26057|ankyrin repeat domain 17##AF308285|ANKRD17|26057|ankyrin repeat domain 17##NM_032217|ANKRD17|26057|ankyrin repeat domain 17##NM_198889|ANKRD17|26057|ankyrin repeat domain 17##AK307581|ANKRD17|26057|ankyrin repeat domain 17##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17##NM_000477|ALB|213|albumin##AK292755|ALB|213|albumin##AK298461|ALB|213|albumin##AK308044|ALB|213|albumin##AK314794|ALB|213|albumin##BC034023|ALB|213|albumin##BC035969|ALB|213|albumin##BC036003|ALB|213|albumin##BC041789|ALB|213|albumin##AK298437|ALB|213|albumin##BC034026|ALB|213|albumin##BC039235|ALB|213|albumin##CR749331|ALB|213|albumin##V00494|ALB|213|albumin##AF542069|ALB|213|albumin##AY960291|ALB|213|albumin##AY358313|ALB|213|albumin##DQ986150|ALB|213|albumin##AY544124|ALB|213|albumin##AY550967|ALB|213|albumin##DQ891414|ALB|213|albumin##DQ894588|ALB|213|albumin##AF190168|ALB|213|albumin##AY728024|ALB|213|albumin##HQ537426|ALB|213|albumin##BC014308|ALB|213|albumin	0.301291	CTCF.p2:-4:0.301
chr18	45122631	45122763	reg1011437.p1	9.998	+	TSC_hg19_v1_chr18_-_44702736 NM_016097	-419947	-	TSC_hg19_v1_chr18_-_44702734 AK027108	-419964	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	-420008	-	BC014840 NM_005901	334228	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	334518	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	334792	-	NM_016097|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2	0.999545	CTCF.p2:-9:1.000
chr4	164471573	164471706	reg1010039.p1	9.998	+	TSC_hg19_v1_chr4_+_164415868 BC011842	-55766	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-55797	+	TSC_hg19_v1_chr4_+_164415817 BC017418 AK298235	-55823	+	AB463878 AK000675 AK301408 NM_017923	63076	-	NM_012403	647223	-	AK289711 NM_001166373	832767	-	BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##BC017418|C4orf43|55319|chromosome 4 open reading frame 43##AK298235|C4orf43|55319|chromosome 4 open reading frame 43##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	0.999855	CTCF.p2:-18:1.000
chr10	76947782	76947886	reg1010546.p1	9.996	+	TSC_hg19_v1_chr10_+_76871413 BC080593 NM_001174156 NM_144660 AK057811	-76417	+	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	-78920	-	AB027004 AB103375 NM_016364	-88587	-	NM_001184823	22077	+	NM_001184783 NM_003375	22465	+	TSC_hg19_v1_chr10_+_76970563 BC000165 BC072407 AK315919 AK296635	22720	+	BC080593|SAMD8|142891|sterile alpha motif domain containing 8##NM_001174156|SAMD8|142891|sterile alpha motif domain containing 8##NM_144660|SAMD8|142891|sterile alpha motif domain containing 8##AK057811|SAMD8|142891|sterile alpha motif domain containing 8##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##NM_001184823|VDAC2|7417|voltage-dependent anion channel 2##NM_001184783|VDAC2|7417|voltage-dependent anion channel 2##NM_003375|VDAC2|7417|voltage-dependent anion channel 2##BC000165|VDAC2|7417|voltage-dependent anion channel 2##BC072407|VDAC2|7417|voltage-dependent anion channel 2##AK315919|VDAC2|7417|voltage-dependent anion channel 2##AK296635|VDAC2|7417|voltage-dependent anion channel 2	0.997475	CTCF.p2:-2:0.997
chr5	5419581	5419722	reg1014174.p1	9.996	+	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	-279140	+	AY335938 NM_024337	-1823484	+	AY249325 NM_178569 BC101608 BC101634 BC143638 BC143639 BC143640 BC171731	-2667350	+	TSC_hg19_v1_chr5_+_5422777 AK126937	3124	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	3258	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	958999	-	AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AY335938|IRX1|79192|iroquois homeobox 1##NM_024337|IRX1|79192|iroquois homeobox 1##AY249325|C5orf38|153571|chromosome 5 open reading frame 38##NM_178569|C5orf38|153571|chromosome 5 open reading frame 38##BC101608|C5orf38|153571|chromosome 5 open reading frame 38##BC101634|C5orf38|153571|chromosome 5 open reading frame 38##BC143638|C5orf38|153571|chromosome 5 open reading frame 38##BC143639|C5orf38|153571|chromosome 5 open reading frame 38##BC143640|C5orf38|153571|chromosome 5 open reading frame 38##BC171731|C5orf38|153571|chromosome 5 open reading frame 38##AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10	0.094912	
chr7	37241299	37241432	reg1013020.p1	9.996	+	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	-215645	-	BC064635 NM_001039459	-216675	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-477289	-	AK291784 NM_001206482	151906	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	247103	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	247190	-	D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1	0.999484	CTCF.p2:7:0.999
chr19	48770405	48770533	reg1013748.p1	9.995	+	TSC_hg19_v1_chr19_-_48759141 BC056891 BC034564 BC046136 NM_001184902 NM_001184904	-11298	-	AK125548 TSC_hg19_v1_chr19_+_48758936 BC060888 BC008448 BC033836	-11520	+	AB023172 AF322184 AF511652 TSC_hg19_v1_chr19_-_48753084 BC041697 BC045539 AK302327 AK311079 AK297045 BX648568 AK297069 NM_001184901 NM_001184903 NM_014959	-17445	-	AK075062 NM_153608	4184	+	BC007730 NM_144577	52862	-	TSC_hg19_v1_chr19_-_48825152 AK128144	54701	-	BC056891|CARD8|22900|caspase recruitment domain family, member 8##BC034564|CARD8|22900|caspase recruitment domain family, member 8##BC046136|CARD8|22900|caspase recruitment domain family, member 8##NM_001184902|CARD8|22900|caspase recruitment domain family, member 8##NM_001184904|CARD8|22900|caspase recruitment domain family, member 8##AK125548|LOC100505812|100505812|uncharacterized LOC100505812##BC060888|LOC100505812|100505812|uncharacterized LOC100505812##AB023172|CARD8|22900|caspase recruitment domain family, member 8##AF322184|CARD8|22900|caspase recruitment domain family, member 8##AF511652|CARD8|22900|caspase recruitment domain family, member 8##BC041697|CARD8|22900|caspase recruitment domain family, member 8##BC045539|CARD8|22900|caspase recruitment domain family, member 8##AK302327|CARD8|22900|caspase recruitment domain family, member 8##AK311079|CARD8|22900|caspase recruitment domain family, member 8##AK297045|CARD8|22900|caspase recruitment domain family, member 8##BX648568|CARD8|22900|caspase recruitment domain family, member 8##AK297069|CARD8|22900|caspase recruitment domain family, member 8##NM_001184901|CARD8|22900|caspase recruitment domain family, member 8##NM_001184903|CARD8|22900|caspase recruitment domain family, member 8##NM_014959|CARD8|22900|caspase recruitment domain family, member 8##AK075062|ZNF114|163071|zinc finger protein 114##NM_153608|ZNF114|163071|zinc finger protein 114##BC007730|CCDC114|93233|coiled-coil domain containing 114##NM_144577|CCDC114|93233|coiled-coil domain containing 114##AK128144|CCDC114|93233|coiled-coil domain containing 114	0.877152	CTCF.p2:-12:0.877
chr2	175552941	175553061	reg1011406.p2	9.995	+	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	-5247	-	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	-53704	-	TSC_hg19_v1_chr2_-_175462533 BC002914 X86019	-90520	-	TSC_hg19_v1_chr2_+_175584527 DQ895855	31577	+	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	76168	-	AK055060 NM_001206602	159309	-	BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1##AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1##X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1##DQ895855|H3F3A|3020|H3 histone, family 3A##AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1	0.0	
chr1	185565329	185565458	reg1011971.p1	9.994	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-278923	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-279074	-	TSC_hg19_v1_chr1_+_185126418 AK291443	-438997	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	138183	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	700014	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	778864	-	NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)	0.705654	CTCF.p2:-2:0.706
chr4	41695019	41695133	reg1010239.p1	9.994	+	TSC_hg19_v1_chr4_+_41614937 AK299835 CU686623	-80064	+	TSC_hg19_v1_chr4_+_41614918 AK298915 AK299297 BC068200 BX537916 CR749205 NM_001112719 NM_001112720	-80157	+	AK294774 TSC_hg19_v1_chr4_+_41614797	-80312	+	TSC_hg19_v1_chr4_+_41700736 AL117572	5700	+	BC017199 TSC_hg19_v1_chr4_-_41750743 AK311082	55656	-	TSC_hg19_v1_chr4_-_41750938 D82344 NM_003924	55885	-	AK299835|LIMCH1|22998|LIM and calponin homology domains 1##AK298915|LIMCH1|22998|LIM and calponin homology domains 1##AK299297|LIMCH1|22998|LIM and calponin homology domains 1##BC068200|LIMCH1|22998|LIM and calponin homology domains 1##BX537916|LIMCH1|22998|LIM and calponin homology domains 1##CR749205|LIMCH1|22998|LIM and calponin homology domains 1##NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1##NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1##AK294774|LIMCH1|22998|LIM and calponin homology domains 1##AL117572|LIMCH1|22998|LIM and calponin homology domains 1##BC017199|PHOX2B|8929|paired-like homeobox 2b##D82344|PHOX2B|8929|paired-like homeobox 2b##NM_003924|PHOX2B|8929|paired-like homeobox 2b	0.326247	CTCF.p2:-6:0.326
chr1	214758627	214758733	reg1008743.p1	9.993	+	TSC_hg19_v1_chr1_-_214724977 NM_005401	-33682	-	TSC_hg19_v1_chr1_-_214724946 AK298120 BX538306 AK291641	-33781	-	X82676 TSC_hg19_v1_chr1_-_214724620 BC017300 AK090596	-34073	-	TSC_hg19_v1_chr1_+_214776547 NM_016343 U19769 AK307690	17841	+	TSC_hg19_v1_chr1_+_214776585 U30872	17938	+	NM_001017424	420204	+	NM_005401|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK298120|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK291641|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##X82676|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##BC017300|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK090596|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##NM_016343|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##U19769|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##AK307690|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##U30872|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2	0.0	
chr8	17460239	17460350	reg1011771.p1	9.993	+	D37965 TSC_hg19_v1_chr8_+_17434724 BC010927 AB529173 CR541952 CU679854 DQ892944 DQ896192	-25564	+	AK289450 NM_006207	-26353	+	NM_001164771 NM_003046 BC069648 BC104905 BC113661 BC143583	-63956	+	AF293357 BC017740 AK314692 BC098381 BC142971 FJ472827 AK289750 NM_020749	94907	-	AK125188 FJ472826 NM_001001931	119435	-	AK294860 NM_001166393	119759	-	D37965|PDGFRL|5157|platelet-derived growth factor receptor-like##BC010927|PDGFRL|5157|platelet-derived growth factor receptor-like##CR541952|PDGFRL|5157|platelet-derived growth factor receptor-like##DQ892944|PDGFRL|5157|platelet-derived growth factor receptor-like##DQ896192|PDGFRL|5157|platelet-derived growth factor receptor-like##AK289450|PDGFRL|5157|platelet-derived growth factor receptor-like##NM_006207|PDGFRL|5157|platelet-derived growth factor receptor-like##NM_001164771|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##NM_003046|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##BC069648|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##BC104905|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##BC113661|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##BC143583|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##AF293357|MTUS1|57509|microtubule associated tumor suppressor 1##BC017740|MTUS1|57509|microtubule associated tumor suppressor 1##AK314692|MTUS1|57509|microtubule associated tumor suppressor 1##BC098381|MTUS1|57509|microtubule associated tumor suppressor 1##BC142971|MTUS1|57509|microtubule associated tumor suppressor 1##FJ472827|MTUS1|57509|microtubule associated tumor suppressor 1##AK289750|MTUS1|57509|microtubule associated tumor suppressor 1##NM_020749|MTUS1|57509|microtubule associated tumor suppressor 1##AK125188|MTUS1|57509|microtubule associated tumor suppressor 1##FJ472826|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1##AK294860|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1	0.84357	CTCF.p2:-2:0.844
chr20	34189573	34189720	reg1010316.p2	9.992	+	TSC_hg19_v1_chr20_+_34129833 CU679479 CU680742 AF091085	-59801	+	AK074550 BC009765 TSC_hg19_v1_chr20_+_34129829 AK096484 AK300916	-59816	+	NM_015966 NM_198398 TSC_hg19_v1_chr20_+_34129827 AF308298 AF077030 AF151812 EF206690 BC014014	-59844	+	BC029951 AY461812 TSC_hg19_v1_chr20_-_34195432	5776	-	TSC_hg19_v1_chr20_+_34203752 AF262992 NM_003116 BC143783 AB464242	14189	+	NM_003915	52184	-	AF091085|ERGIC3|51614|ERGIC and golgi 3##AK074550|ERGIC3|51614|ERGIC and golgi 3##BC009765|ERGIC3|51614|ERGIC and golgi 3##AK096484|ERGIC3|51614|ERGIC and golgi 3##AK300916|ERGIC3|51614|ERGIC and golgi 3##NM_015966|ERGIC3|51614|ERGIC and golgi 3##NM_198398|ERGIC3|51614|ERGIC and golgi 3##AF308298|ERGIC3|51614|ERGIC and golgi 3##AF077030|ERGIC3|51614|ERGIC and golgi 3##AF151812|ERGIC3|51614|ERGIC and golgi 3##EF206690|ERGIC3|51614|ERGIC and golgi 3##BC014014|ERGIC3|51614|ERGIC and golgi 3##BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene##AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene##AF262992|SPAG4|6676|sperm associated antigen 4##NM_003116|SPAG4|6676|sperm associated antigen 4##BC143783|SPAG4|6676|sperm associated antigen 4##NM_003915|CPNE1|8904|copine I	0.579373	CTCF.p2:0:0.579
chr20	58425227	58425340	reg1011728.p2	9.992	+	AB098521 AB098522 NM_183244 NM_183246	-129019	+	AJ617581 NM_001199506 AK316047	-173567	+	BC108303 AJ311122 NM_080672 TSC_hg19_v1_chr20_+_58179660 BC117362 BC117364	-245629	+	BC132864 BC132870 NM_014258	81907	-	BX648091 BX649108 BC146798 TSC_hg19_v1_chr20_-_58508726	83424	-	AK125073 NM_001190826	83535	+	AB098521|PHACTR3|116154|phosphatase and actin regulator 3##AB098522|PHACTR3|116154|phosphatase and actin regulator 3##NM_183244|PHACTR3|116154|phosphatase and actin regulator 3##NM_183246|PHACTR3|116154|phosphatase and actin regulator 3##AJ617581|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199506|PHACTR3|116154|phosphatase and actin regulator 3##AK316047|PHACTR3|116154|phosphatase and actin regulator 3##BC108303|PHACTR3|116154|phosphatase and actin regulator 3##AJ311122|PHACTR3|116154|phosphatase and actin regulator 3##NM_080672|PHACTR3|116154|phosphatase and actin regulator 3##BC117362|PHACTR3|116154|phosphatase and actin regulator 3##BC117364|PHACTR3|116154|phosphatase and actin regulator 3##BC132864|SYCP2|10388|synaptonemal complex protein 2##BC132870|SYCP2|10388|synaptonemal complex protein 2##NM_014258|SYCP2|10388|synaptonemal complex protein 2##BX648091|SYCP2|10388|synaptonemal complex protein 2##BX649108|SYCP2|10388|synaptonemal complex protein 2##BC146798|SYCP2|10388|synaptonemal complex protein 2##AK125073|C20orf177|63939|chromosome 20 open reading frame 177##NM_001190826|C20orf177|63939|chromosome 20 open reading frame 177	0.252557	CTCF.p2:4:0.253
chr5	126649672	126649791	reg1013340.p1	9.992	+	NM_032446 CR749437 AK307919 BC020198 AB058676 BC152478	-23197	+	AK126569 NM_001164478 NM_001164479	-240554	-	NM_178450	-283292	-	NM_130809 TSC_hg19_v1_chr5_+_126853331 AL831963 AL832056 AL832600 AJ427339 AJ441110 AJ496322 AJ515158 AJ515428 AJ515429 AK057437 BC017066	203620	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	209463	+	NM_001048252 AB219764	334992	+	NM_032446|MEGF10|84466|multiple EGF-like-domains 10##CR749437|MEGF10|84466|multiple EGF-like-domains 10##AK307919|MEGF10|84466|multiple EGF-like-domains 10##BC020198|MEGF10|84466|multiple EGF-like-domains 10##AB058676|MEGF10|84466|multiple EGF-like-domains 10##BC152478|MEGF10|84466|multiple EGF-like-domains 10##AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63##NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##NM_130809|PRRC1|133619|proline-rich coiled-coil 1##AL831963|PRRC1|133619|proline-rich coiled-coil 1##AL832056|PRRC1|133619|proline-rich coiled-coil 1##AL832600|PRRC1|133619|proline-rich coiled-coil 1##AJ427339|PRRC1|133619|proline-rich coiled-coil 1##AJ441110|PRRC1|133619|proline-rich coiled-coil 1##AJ496322|PRRC1|133619|proline-rich coiled-coil 1##AJ515158|PRRC1|133619|proline-rich coiled-coil 1##AJ515428|PRRC1|133619|proline-rich coiled-coil 1##AJ515429|PRRC1|133619|proline-rich coiled-coil 1##AK057437|PRRC1|133619|proline-rich coiled-coil 1##BC017066|PRRC1|133619|proline-rich coiled-coil 1##AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1##NM_001048252|CTXN3|613212|cortexin 3##AB219764|CTXN3|613212|cortexin 3	0.865788	CTCF.p2:12:0.866
chr10	89416351	89416484	reg1012072.p2	9.991	+	AK309176 NM_001178118	-148828	+	NM_001178117 NM_004897 TSC_hg19_v1_chr10_+_89264649 AK304624 AK312937 AL050356 AF084943 AB209819 AF084944 AY358938 BC032504 AF046914 CU689404	-151942	+	BC092519 NM_001009610	-298967	+	TSC_hg19_v1_chr10_+_89419623 NM_001015880 NM_004670 BC009894 AK312556 AF091242 AF150754 AF074331 AF173365 DQ893625 DQ895430 AF313907	3128	+	TSC_hg19_v1_chr10_-_89577921 AK075223 NM_032810	161485	-	EU552092 NM_001126049	206776	-	AK309176|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178118|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178117|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_004897|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK304624|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK312937|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AL050356|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF084943|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AB209819|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF084944|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AY358938|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##BC032504|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF046914|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##BC092519|FAM22A|728118|family with sequence similarity 22, member A##NM_001009610|FAM22D|728130|family with sequence similarity 22, member D##NM_001015880|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##NM_004670|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##BC009894|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK312556|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF091242|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF150754|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF074331|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF173365|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ893625|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ895430|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF313907|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK075223|ATAD1|84896|ATPase family, AAA domain containing 1##NM_032810|ATAD1|84896|ATPase family, AAA domain containing 1##EU552092|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_001126049|KLLN|100144748|killin, p53-regulated DNA replication inhibitor	0.96402	CTCF.p2:-6:0.964
chr1	38968633	38968744	reg1009506.p2	9.991	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-456239	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-490258	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-490303	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	356698	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	370328	-	AK312811 BC051675 AK123051 NM_030772	378589	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.0	
chr14	61763786	61763917	reg1013173.p1	9.991	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-15329	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-15657	-	TSC_hg19_v1_chr14_-_61747957 AK091169 AX746825	-15886	-	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	24676	+	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	398339	+	FJ790247 NM_001243084	400488	+	NM_001017970|TMEM30B|161291|transmembrane protein 30B##AK091169|TMEM30B|161291|transmembrane protein 30B##AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	0.948177	CTCF.p2:-18:0.948
chr20	1715280	1715409	reg1010888.p2	9.991	+	AY748247 AY748248 CU687894 BC064532 BC020629 AK292745 NM_001039508 NM_018556 NM_080816	-76953	-	AB590891 CU692960 BC131747 Y10376 BC025286 BC075835 TSC_hg19_v1_chr20_-_1600656 AK289866 AK313517 BX537992 NM_001083910 NM_001135844 NM_006065	-114706	-	DQ891297 EU176577 BC033502 NM_178460	-177022	-	TSC_hg19_v1_chr20_+_1874780 NM_001040022	159452	+	TSC_hg19_v1_chr20_+_1874954 BC075849 AK290776	159645	+	TSC_hg19_v1_chr20_+_1875136 AK298243	159790	+	AY748247|SIRPG|55423|signal-regulatory protein gamma##AY748248|SIRPG|55423|signal-regulatory protein gamma##BC064532|SIRPG|55423|signal-regulatory protein gamma##BC020629|SIRPG|55423|signal-regulatory protein gamma##AK292745|SIRPG|55423|signal-regulatory protein gamma##NM_001039508|SIRPG|55423|signal-regulatory protein gamma##NM_018556|SIRPG|55423|signal-regulatory protein gamma##NM_080816|SIRPG|55423|signal-regulatory protein gamma##BC131747|SIRPB1|10326|signal-regulatory protein beta 1##Y10376|SIRPB1|10326|signal-regulatory protein beta 1##BC025286|SIRPB1|10326|signal-regulatory protein beta 1##BC075835|SIRPB1|10326|signal-regulatory protein beta 1##AK289866|SIRPB1|10326|signal-regulatory protein beta 1##BX537992|SIRPB1|10326|signal-regulatory protein beta 1##NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1##NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1##NM_006065|SIRPB1|10326|signal-regulatory protein beta 1##DQ891297|SIRPD|128646|signal-regulatory protein delta##EU176577|SIRPD|128646|signal-regulatory protein delta##BC033502|SIRPD|128646|signal-regulatory protein delta##NM_178460|SIRPD|128646|signal-regulatory protein delta##NM_001040022|SIRPA|140885|signal-regulatory protein alpha##BC075849|SIRPA|140885|signal-regulatory protein alpha##AK290776|SIRPA|140885|signal-regulatory protein alpha##AK298243|SIRPA|140885|signal-regulatory protein alpha	0.0	
chr3	40220572	40220700	reg1013753.p1	9.990	+	TSC_hg19_v1_chr3_+_39851138 BC092512 AK126013 AF396687 NM_015460 BC109311 BC109312	-369461	+	NM_182935 BC075796 AK127034 AK290187 BC022471	-711517	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	-771494	+	BC031275 AK057627 AK309874 AK309698 TSC_hg19_v1_chr3_-_40351022 BC045736 BC118565 BC106900	130432	-	NM_005875 TSC_hg19_v1_chr3_+_40351187 AK223448 BC006996 AF077052	130544	+	TSC_hg19_v1_chr3_+_40351197 AF263452	130570	+	BC092512|MYRIP|25924|myosin VIIA and Rab interacting protein##AK126013|MYRIP|25924|myosin VIIA and Rab interacting protein##AF396687|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_015460|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109311|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109312|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA##BC031275|FLJ33065|440952|uncharacterized LOC440952##AK057627|FLJ33065|440952|uncharacterized LOC440952##AK309874|FLJ33065|440952|uncharacterized LOC440952##BC045736|FLJ33065|440952|uncharacterized LOC440952##BC118565|FLJ33065|440952|uncharacterized LOC440952##BC106900|FLJ33065|440952|uncharacterized LOC440952##NM_005875|EIF1B|10289|eukaryotic translation initiation factor 1B##AK223448|EIF1B|10289|eukaryotic translation initiation factor 1B##BC006996|EIF1B|10289|eukaryotic translation initiation factor 1B##AF077052|EIF1B|10289|eukaryotic translation initiation factor 1B##AF263452|EIF1B|10289|eukaryotic translation initiation factor 1B	0.999462	CTCF.p2:5:0.999
chr4	71553917	71554071	reg1010915.p1	9.990	+	TSC_hg19_v1_chr4_-_71532347 NM_144646	-21648	-	AB527699 DQ884395 TSC_hg19_v1_chr4_-_71532226 AK312014 BC038982	-21760	-	AF125373 NM_031889	-59534	+	NM_020368 AF271212 TSC_hg19_v1_chr4_+_71554248 AK026909 BC004546 AL136590 AB463337 AM392862 AM393072 AM393229 DQ892999 EU176750 CU678762 CR533544	300	+	TSC_hg19_v1_chr4_+_71570618 NM_001130709	16640	+	TSC_hg19_v1_chr4_+_71570768 AK000911 AF112221	16825	+	NM_144646|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##DQ884395|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##AK312014|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##BC038982|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##AF125373|ENAM|10117|enamelin##NM_031889|ENAM|10117|enamelin##NM_020368|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AF271212|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AK026909|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##BC004546|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AL136590|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AM392862|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AM393072|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AM393229|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##DQ892999|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##EU176750|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##CR533544|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##NM_001130709|RUFY3|22902|RUN and FYVE domain containing 3##AK000911|RUFY3|22902|RUN and FYVE domain containing 3##AF112221|RUFY3|22902|RUN and FYVE domain containing 3	0.989147	CTCF.p2:-37:0.989
chr11	102164872	102164985	reg1012136.p1	9.989	+	NM_001195045 AK316116	-181721	+	TSC_hg19_v1_chr11_+_101981177 AK300414 NM_001130145 NM_001195044 NM_006106 BC038235 AB528588 AB567720 AB567721 AY316529	-183726	+	NM_001195005 NM_032930 AK094851 BC054869 TSC_hg19_v1_chr11_+_101918188 BC006128	-246745	+	NM_001165 NM_182962 TSC_hg19_v1_chr11_+_102188214 AF070674	23274	+	TSC_hg19_v1_chr11_+_102217944 AK303197	53001	+	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	53100	+	NM_001195045|YAP1|10413|Yes-associated protein 1##AK316116|YAP1|10413|Yes-associated protein 1##AK300414|YAP1|10413|Yes-associated protein 1##NM_001130145|YAP1|10413|Yes-associated protein 1##NM_001195044|YAP1|10413|Yes-associated protein 1##NM_006106|YAP1|10413|Yes-associated protein 1##BC038235|YAP1|10413|Yes-associated protein 1##AB567720|YAP1|10413|Yes-associated protein 1##AB567721|YAP1|10413|Yes-associated protein 1##AY316529|YAP1|10413|Yes-associated protein 1##NM_001195005|C11orf70|85016|chromosome 11 open reading frame 70##NM_032930|C11orf70|85016|chromosome 11 open reading frame 70##AK094851|C11orf70|85016|chromosome 11 open reading frame 70##BC054869|C11orf70|85016|chromosome 11 open reading frame 70##BC006128|C11orf70|85016|chromosome 11 open reading frame 70##NM_001165|BIRC3|330|baculoviral IAP repeat containing 3##NM_182962|BIRC3|330|baculoviral IAP repeat containing 3##AF070674|BIRC3|330|baculoviral IAP repeat containing 3##AK303197|BIRC2|329|baculoviral IAP repeat containing 2##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2	0.664687	CTCF.p2:-8:0.665
chr20	44085427	44085554	reg1012677.p1	9.989	+	NM_001184728 NM_001184729 NM_001184730 NM_015937 AK302093 TSC_hg19_v1_chr20_+_44044780 BC136827 BC136828 AK225517 BC015022 AK296063 AK299013 AK301815 AK311492 AK311520 AK316358 AK075469 AK293294 BX537612 AK293686 AK296139 AK311100 AK311416 AK311522 AB057724 BC110892 AY358588 AF132940 AL121742	-40736	+	TSC_hg19_v1_chr20_+_44036940 AY113697 AB463592 AM393126 AM393396 AM393681 CU674552	-48467	+	NM_001048225 NM_001048226	-48862	+	AK290288 AK311966 TSC_hg19_v1_chr20_+_44098394 NM_006103 AK225528 X63187 AY212888 AF330259 AF330260 AF330262 BC039816 BC046106 EU831749 EU831825 CR456977	12916	+	AY372172 NM_006652	58773	-	BC101600 BC101604 AF411861 NM_080827	82640	-	NM_001184728|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##NM_001184729|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##NM_001184730|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##NM_015937|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK302093|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BC136827|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BC136828|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK225517|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BC015022|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK296063|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK299013|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK301815|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311492|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311520|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK316358|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK075469|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK293294|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BX537612|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK293686|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK296139|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311100|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311416|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311522|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AB057724|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BC110892|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AY358588|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AF132940|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AL121742|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AY113697|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AM393126|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AM393396|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AM393681|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048225|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048226|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AK290288|WFDC2|10406|WAP four-disulfide core domain 2##AK311966|WFDC2|10406|WAP four-disulfide core domain 2##NM_006103|WFDC2|10406|WAP four-disulfide core domain 2##AK225528|WFDC2|10406|WAP four-disulfide core domain 2##X63187|WFDC2|10406|WAP four-disulfide core domain 2##AY212888|WFDC2|10406|WAP four-disulfide core domain 2##AF330259|WFDC2|10406|WAP four-disulfide core domain 2##AF330260|WFDC2|10406|WAP four-disulfide core domain 2##AF330262|WFDC2|10406|WAP four-disulfide core domain 2##BC039816|WFDC2|10406|WAP four-disulfide core domain 2##BC046106|WFDC2|10406|WAP four-disulfide core domain 2##EU831749|WFDC2|10406|WAP four-disulfide core domain 2##EU831825|WFDC2|10406|WAP four-disulfide core domain 2##CR456977|WFDC2|10406|WAP four-disulfide core domain 2##AY372172|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3##NM_006652|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3##BC101600|WFDC6|140870|WAP four-disulfide core domain 6##BC101604|WFDC6|140870|WAP four-disulfide core domain 6##AF411861|WFDC6|140870|WAP four-disulfide core domain 6##NM_080827|WFDC6|140870|WAP four-disulfide core domain 6	0.859562	CTCF.p2:-9:0.860
chr17	59628662	59628776	reg1010880.p2	9.988	+	AF188703 NM_018488 BC136403 BC144062 AB464284	-94891	+	BC142620 TSC_hg19_v1_chr17_+_59529788	-98933	+	BC046200 NM_203425	-139608	+	CU687600 BC062710 NM_199290 TSC_hg19_v1_chr17_-_59668583	39843	-	BC101472 BC101474 AF360549 TSC_hg19_v1_chr17_-_59940873 NM_032043	312075	-	TSC_hg19_v1_chr17_-_60005339 AB033113 AK308307 AK299032 AL136800 NM_020748	376623	-	AF188703|TBX4|9496|T-box 4##NM_018488|TBX4|9496|T-box 4##BC136403|TBX4|9496|T-box 4##BC144062|TBX4|9496|T-box 4##BC142620|TBX4|9496|T-box 4##BC046200|C17orf82|388407|chromosome 17 open reading frame 82##NM_203425|C17orf82|388407|chromosome 17 open reading frame 82##BC062710|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##NM_199290|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##BC101472|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##BC101474|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AF360549|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_032043|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AB033113|INTS2|57508|integrator complex subunit 2##AK308307|INTS2|57508|integrator complex subunit 2##AK299032|INTS2|57508|integrator complex subunit 2##AL136800|INTS2|57508|integrator complex subunit 2##NM_020748|INTS2|57508|integrator complex subunit 2	0.0	
chr16	84518356	84518482	reg1011842.p2	9.987	+	TSC_hg19_v1_chr16_+_84402143 AK300526 AY791884 BX648333 NM_014861 AK316128 CR749829	-116277	+	AF302109 NM_021197 AF169631 TSC_hg19_v1_chr16_+_84328440 AK075061 BC029159 DQ893365 DQ896682	-189931	+	BC109203 BC008969 NM_172347	-245090	-	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	19872	-	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	133157	-	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	133241	-	AK300526|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AY791884|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BX648333|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##NM_014861|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AK316128|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##CR749829|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AF302109|WFDC1|58189|WAP four-disulfide core domain 1##NM_021197|WFDC1|58189|WAP four-disulfide core domain 1##AF169631|WFDC1|58189|WAP four-disulfide core domain 1##AK075061|WFDC1|58189|WAP four-disulfide core domain 1##BC029159|WFDC1|58189|WAP four-disulfide core domain 1##DQ893365|WFDC1|58189|WAP four-disulfide core domain 1##DQ896682|WFDC1|58189|WAP four-disulfide core domain 1##BC109203|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##BC008969|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##NM_172347|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)	0.94417	CTCF.p2:6:0.944
chr6	8983492	8983634	reg1010846.p1	9.987	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-547675	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-547855	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-880773	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	1429053	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	1431712	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	1431905	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.109821	
chr17	56788476	56788594	reg1010987.p2	9.986	+	TSC_hg19_v1_chr17_+_56769962 AF029669 AK290487 BC073161 NM_002876 NM_058216 BC064578 BC093930 BC101485 BC143259 BC000667 AF029670 AB528656 BT007339 AK129738 AK303363	-18534	+	TSC_hg19_v1_chr17_+_56769933 BC107753	-18600	+	AK308299 BC040526 AK125896 BC045647 AL834143 NM_001201457 NM_031272 NM_198393	-19140	-	TSC_hg19_v1_chr17_+_56833220 AK289966	44682	+	AB028995 AF260269 BC151228 NM_014906 TSC_hg19_v1_chr17_+_56833235 BC136290 BC143845 AF520614	44759	+	TSC_hg19_v1_chr17_-_57184098 AF213365 AK289674 BX537955	395538	-	AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC107753|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK308299|TEX14|56155|testis expressed 14##BC040526|TEX14|56155|testis expressed 14##AK125896|TEX14|56155|testis expressed 14##BC045647|TEX14|56155|testis expressed 14##AL834143|TEX14|56155|testis expressed 14##NM_001201457|TEX14|56155|testis expressed 14##NM_031272|TEX14|56155|testis expressed 14##NM_198393|TEX14|56155|testis expressed 14##AK289966|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AB028995|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AF260269|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##BC151228|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##NM_014906|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##BC136290|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##BC143845|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AF520614|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AF213365|TRIM37|4591|tripartite motif containing 37##AK289674|TRIM37|4591|tripartite motif containing 37##BX537955|TRIM37|4591|tripartite motif containing 37	0.997455	CTCF.p2:-16:0.997
chr2	68258787	68258917	reg1012151.p1	9.986	+	TSC_hg19_v1_chr2_+_67624467 NM_019002 AJ242682 BC033075 BC040001	-634370	+	TSC_hg19_v1_chr2_+_66666452 AK297109	-1592402	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	-1596012	+	BC016284 TSC_hg19_v1_chr2_-_68290140 X95592 BC009584 BC009589 BC005235 AK290451	31282	-	NM_001190263 NM_001190265 NM_006333 NM_173177 TSC_hg19_v1_chr2_-_68290160	31308	-	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	125782	-	NM_019002|ETAA1|54465|Ewing tumor-associated antigen 1##AJ242682|ETAA1|54465|Ewing tumor-associated antigen 1##BC033075|ETAA1|54465|Ewing tumor-associated antigen 1##BC040001|ETAA1|54465|Ewing tumor-associated antigen 1##AK297109|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##BC016284|C1D|10438|C1D nuclear receptor corepressor##X95592|C1D|10438|C1D nuclear receptor corepressor##BC009584|C1D|10438|C1D nuclear receptor corepressor##BC009589|C1D|10438|C1D nuclear receptor corepressor##BC005235|C1D|10438|C1D nuclear receptor corepressor##AK290451|C1D|10438|C1D nuclear receptor corepressor##NM_001190263|C1D|10438|C1D nuclear receptor corepressor##NM_001190265|C1D|10438|C1D nuclear receptor corepressor##NM_006333|C1D|10438|C1D nuclear receptor corepressor##NM_173177|C1D|10438|C1D nuclear receptor corepressor##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92	0.902369	CTCF.p2:18:0.902
chr11	72182476	72182620	reg1011798.p1	9.985	+	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	-36898	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	-36972	-	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	-37093	-	TSC_hg19_v1_chr11_-_72353458 AY495089 AK131525 AK092278 AX747449 NM_001143839 NM_001243784	170931	-	AY495087 NM_001146209	197559	-	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	202905	-	AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK131525|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK092278|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001143839|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001243784|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	0.12653	
chr15	41896160	41896290	reg1011885.p1	9.985	+	TSC_hg19_v1_chr15_+_41851415 NM_006293 D17517 BC051756 BC034960 BC049368 U05682 AB384948 CU690612 D50479	-44890	+	TSC_hg19_v1_chr15_-_41836465 AK022794 NM_015540 AK308884	-59761	-	AB037824 TSC_hg19_v1_chr15_-_41836456 AK290224 BC000246	-59776	-	TSC_hg19_v1_chr15_+_41952628 NM_001080541 NM_001164273	56380	+	TSC_hg19_v1_chr15_+_41952661 AK055203	56427	+	AB011090 TSC_hg19_v1_chr15_+_42052630	156378	+	NM_006293|TYRO3|7301|TYRO3 protein tyrosine kinase##D17517|TYRO3|7301|TYRO3 protein tyrosine kinase##BC051756|TYRO3|7301|TYRO3 protein tyrosine kinase##BC034960|TYRO3|7301|TYRO3 protein tyrosine kinase##BC049368|TYRO3|7301|TYRO3 protein tyrosine kinase##U05682|TYRO3|7301|TYRO3 protein tyrosine kinase##D50479|TYRO3|7301|TYRO3 protein tyrosine kinase##AK022794|RPAP1|26015|RNA polymerase II associated protein 1##NM_015540|RPAP1|26015|RNA polymerase II associated protein 1##AK308884|RPAP1|26015|RNA polymerase II associated protein 1##AB037824|RPAP1|26015|RNA polymerase II associated protein 1##AK290224|RPAP1|26015|RNA polymerase II associated protein 1##BC000246|RPAP1|26015|RNA polymerase II associated protein 1##NM_001080541|MGA|23269|MAX gene associated##NM_001164273|MGA|23269|MAX gene associated##AK055203|MGA|23269|MAX gene associated##AB011090|MGA|23269|MAX gene associated	0.565871	CTCF.p2:-2:0.566
chr3	78694991	78695131	reg1013196.p1	9.985	+	TSC_hg19_v1_chr3_-_78666943 AK025535	-28076	-	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-1605781	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-2860359	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	373526	-	NM_002941	1121997	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	3115636	-	AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK123776|ZNF717|100131827|zinc finger protein 717##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.977228	CTCF.p2:21:0.977
chr4	21767552	21767663	reg1010517.p1	9.985	+	BX648990 DQ148490 NM_001035003	-68290	-	DQ148491 NM_001035004	-221329	-	AY118170 DQ148489 NM_147183 AK290998	-462038	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	182777	-	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	749947	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	926985	+	BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##DQ148491|KCNIP4|80333|Kv channel interacting protein 4##NM_001035004|KCNIP4|80333|Kv channel interacting protein 4##AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4##NM_147182|KCNIP4|80333|Kv channel interacting protein 4##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	0.136444	
chr9	96065095	96065210	reg1012055.p1	9.985	+	AJ242724 NM_006648 AB051547 AB463351	-117920	+	BT007164 CU690562 U72661 U91512 BC019336 BC004440 BC000298 TSC_hg19_v1_chr9_-_95896534 BC048212 NM_004148	-168610	-	BC091476 TSC_hg19_v1_chr9_+_95858566	-206573	+	NM_001098808 TSC_hg19_v1_chr9_-_96108726	43558	-	BC080634 TSC_hg19_v1_chr9_-_96213799 BC037551 BC063650 BC038803	148636	-	BC046183 TSC_hg19_v1_chr9_-_96213849	148695	-	AJ242724|WNK2|65268|WNK lysine deficient protein kinase 2##NM_006648|WNK2|65268|WNK lysine deficient protein kinase 2##AB051547|WNK2|65268|WNK lysine deficient protein kinase 2##BT007164|NINJ1|4814|ninjurin 1##U72661|NINJ1|4814|ninjurin 1##U91512|NINJ1|4814|ninjurin 1##BC019336|NINJ1|4814|ninjurin 1##BC004440|NINJ1|4814|ninjurin 1##BC000298|NINJ1|4814|ninjurin 1##BC048212|NINJ1|4814|ninjurin 1##NM_004148|NINJ1|4814|ninjurin 1##BC091476|C9orf89|84270|chromosome 9 open reading frame 89##NM_001098808|C9orf129|445577|chromosome 9 open reading frame 129##BC080634|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC037551|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC063650|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC038803|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC046183|FAM120AOS|158293|family with sequence similarity 120A opposite strand	0.886432	CTCF.p2:-3:0.886
chr10	59937253	59937401	reg1011751.p1	9.984	+	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	-1816301	-	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	-1816313	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	-2578553	+	TSC_hg19_v1_chr10_-_60027655 BC016612 BC065709 NM_152230	90334	-	BC005962 TSC_hg19_v1_chr10_+_60028929 NM_018464 BC059168 AF220049 BC008474 BC007043 AY960578 AK312017	91619	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	157509	+	AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##BC016612|IPMK|253430|inositol polyphosphate multikinase##BC065709|IPMK|253430|inositol polyphosphate multikinase##NM_152230|IPMK|253430|inositol polyphosphate multikinase##BC005962|CISD1|55847|CDGSH iron sulfur domain 1##NM_018464|CISD1|55847|CDGSH iron sulfur domain 1##BC059168|CISD1|55847|CDGSH iron sulfur domain 1##AF220049|CISD1|55847|CDGSH iron sulfur domain 1##BC008474|CISD1|55847|CDGSH iron sulfur domain 1##BC007043|CISD1|55847|CDGSH iron sulfur domain 1##AY960578|CISD1|55847|CDGSH iron sulfur domain 1##AK312017|CISD1|55847|CDGSH iron sulfur domain 1##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	0.979785	CTCF.p2:-23:0.980
chr7	129275507	129275630	reg1012780.p1	9.984	+	L22454 NM_001040110	-5651	+	AK293351 TSC_hg19_v1_chr7_+_129251621 BC016925 AK290891	-23956	+	TSC_hg19_v1_chr7_+_129251531 NM_005011	-24027	+	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	317183	-	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	317241	-	TSC_hg19_v1_chr7_-_129691215 BC000190 AB463378 AJ537494 AM393415 CU679956 BC011551 AF151050 AK001317 AK022373 NM_016478	415653	-	L22454|NRF1|4899|nuclear respiratory factor 1##NM_001040110|NRF1|4899|nuclear respiratory factor 1##AK293351|NRF1|4899|nuclear respiratory factor 1##BC016925|NRF1|4899|nuclear respiratory factor 1##AK290891|NRF1|4899|nuclear respiratory factor 1##NM_005011|NRF1|4899|nuclear respiratory factor 1##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC000190|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AJ537494|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AM393415|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC011551|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AF151050|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK001317|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK022373|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_016478|ZC3HC1|51530|zinc finger, C3HC-type containing 1	0.954684	CTCF.p2:7:0.955
chr7	40272238	40272387	reg1011361.p2	9.983	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-97703	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-97781	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	-98181	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	1470373	-	NM_000168	2004305	-	TSC_hg19_v1_chr7_-_42276797 AK308429	2004483	-	AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3	0.836583	CTCF.p2:13:0.837
chr7	73149141	73149290	reg1013678.p1	9.983	+	TSC_hg19_v1_chr7_-_73133986 AB086954 CR457018 D37932 AB464271 GQ129291 GQ129292 L37792 AK313980 BC064644 BC000444 BC003011 AK299959 NM_001165903 NM_004603	-15212	-	TSC_hg19_v1_chr7_-_73123431 U12918	-25780	-	TSC_hg19_v1_chr7_+_73097930 AK091162 AX746819 BC011696 AJ224442 BC000169 AB590720 CU680014 AF218007	-51201	+	AF217971 BC011712 TSC_hg19_v1_chr7_-_73153133 BC067750	3907	-	TSC_hg19_v1_chr7_-_73153173 BC008251 AF412030 AF412031 AF412032 AY053499 AY053500 NM_001145364 NM_148912 NM_148913	3966	-	TSC_hg19_v1_chr7_-_73184607 AB000714 BC009083 BC016056 AK313276 NM_001306	35356	-	AB086954|STX1A|6804|syntaxin 1A (brain)##CR457018|STX1A|6804|syntaxin 1A (brain)##D37932|STX1A|6804|syntaxin 1A (brain)##GQ129291|STX1A|6804|syntaxin 1A (brain)##GQ129292|STX1A|6804|syntaxin 1A (brain)##L37792|STX1A|6804|syntaxin 1A (brain)##AK313980|STX1A|6804|syntaxin 1A (brain)##BC064644|STX1A|6804|syntaxin 1A (brain)##BC000444|STX1A|6804|syntaxin 1A (brain)##BC003011|STX1A|6804|syntaxin 1A (brain)##AK299959|STX1A|6804|syntaxin 1A (brain)##NM_001165903|STX1A|6804|syntaxin 1A (brain)##NM_004603|STX1A|6804|syntaxin 1A (brain)##U12918|STX1A|6804|syntaxin 1A (brain)##AK091162|WBSCR22|114049|Williams Beuren syndrome chromosome region 22##BC011696|WBSCR22|114049|Williams Beuren syndrome chromosome region 22##AJ224442|WBSCR22|114049|Williams Beuren syndrome chromosome region 22##BC000169|WBSCR22|114049|Williams Beuren syndrome chromosome region 22##AF218007|WBSCR22|114049|Williams Beuren syndrome chromosome region 22##AF217971|ABHD11|83451|abhydrolase domain containing 11##BC011712|ABHD11|83451|abhydrolase domain containing 11##BC067750|ABHD11|83451|abhydrolase domain containing 11##BC008251|ABHD11|83451|abhydrolase domain containing 11##AF412030|ABHD11|83451|abhydrolase domain containing 11##AF412031|ABHD11|83451|abhydrolase domain containing 11##AF412032|ABHD11|83451|abhydrolase domain containing 11##AY053499|ABHD11|83451|abhydrolase domain containing 11##AY053500|ABHD11|83451|abhydrolase domain containing 11##NM_001145364|ABHD11|83451|abhydrolase domain containing 11##NM_148912|ABHD11|83451|abhydrolase domain containing 11##NM_148913|ABHD11|83451|abhydrolase domain containing 11##AB000714|CLDN3|1365|claudin 3##BC009083|CLDN3|1365|claudin 3##BC016056|CLDN3|1365|claudin 3##AK313276|CLDN3|1365|claudin 3##NM_001306|CLDN3|1365|claudin 3	0.979851	CTCF.p2:-7:0.980
chr8	98594853	98594974	reg1012441.p1	9.983	+	TSC_hg19_v1_chr8_-_98290193 AK091445 AX746987	-304694	-	TSC_hg19_v1_chr8_-_98290171 BC045630 NM_033512	-304740	-	CU692280 AB384285 AB051537 TSC_hg19_v1_chr8_-_98290135	-304805	-	TSC_hg19_v1_chr8_+_98656416 BC045642 NM_178812 BC001815	61464	+	TSC_hg19_v1_chr8_+_98656437 BC014977 AF501310	61546	+	BC022825 TSC_hg19_v1_chr8_+_98656510 BC009324 AF411226 AY082966 AY974040	61700	+	AK091445|TSPYL5|85453|TSPY-like 5##BC045630|TSPYL5|85453|TSPY-like 5##NM_033512|TSPYL5|85453|TSPY-like 5##AB051537|TSPYL5|85453|TSPY-like 5##BC045642|MTDH|92140|metadherin##NM_178812|MTDH|92140|metadherin##BC001815|MTDH|92140|metadherin##BC014977|MTDH|92140|metadherin##AF501310|MTDH|92140|metadherin##BC022825|MTDH|92140|metadherin##BC009324|MTDH|92140|metadherin##AF411226|MTDH|92140|metadherin##AY082966|MTDH|92140|metadherin##AY974040|MTDH|92140|metadherin	0.998257	CTCF.p2:8:0.998
chr16	21668645	21668763	reg1012112.p1	9.980	+	AJ223183 TSC_hg19_v1_chr16_-_21663991 NM_005849	-4728	-	TSC_hg19_v1_chr16_-_21663930 DQ892013 DQ895202 EU176227 EU176324 AK313860 AK223286 AK290910 AK293703 BC017844	-4784	-	AF151839 TSC_hg19_v1_chr16_+_21611174	-57550	+	BC129993 NM_144672 BC129992	21131	+	AK125840 NM_001161683	27045	+	AK093062 AX747895 NM_170664 BC040551 AK302733	47613	+	AJ223183|IGSF6|10261|immunoglobulin superfamily, member 6##NM_005849|IGSF6|10261|immunoglobulin superfamily, member 6##DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6##DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6##EU176227|IGSF6|10261|immunoglobulin superfamily, member 6##EU176324|IGSF6|10261|immunoglobulin superfamily, member 6##AK313860|IGSF6|10261|immunoglobulin superfamily, member 6##AK223286|IGSF6|10261|immunoglobulin superfamily, member 6##AK290910|IGSF6|10261|immunoglobulin superfamily, member 6##AK293703|IGSF6|10261|immunoglobulin superfamily, member 6##BC017844|IGSF6|10261|immunoglobulin superfamily, member 6##AF151839|METTL9|51108|methyltransferase like 9##BC129993|OTOA|146183|otoancorin##NM_144672|OTOA|146183|otoancorin##BC129992|OTOA|146183|otoancorin##AK125840|OTOA|146183|otoancorin##NM_001161683|OTOA|146183|otoancorin##AK093062|OTOA|146183|otoancorin##NM_170664|OTOA|146183|otoancorin##BC040551|OTOA|146183|otoancorin##AK302733|OTOA|146183|otoancorin	0.993612	CTCF.p2:-10:0.994
chr6	127624004	127624165	reg1013390.p1	9.980	+	TSC_hg19_v1_chr6_+_127588008 AK027558 AL136829 AX721119	-36078	+	NM_001242851 NM_001242844 NM_001242849 NM_001242852 TSC_hg19_v1_chr6_+_127587982 NM_001242845 NM_001242846 NM_001242850 NM_030963	-36180	+	NM_032784 AF251057	-184033	+	AK025796 NM_001139510	39467	-	TSC_hg19_v1_chr6_-_127664482 AK025760	40391	-	TSC_hg19_v1_chr6_-_127664513 AK303812	40439	-	AK027558|RNF146|81847|ring finger protein 146##AL136829|RNF146|81847|ring finger protein 146##NM_001242851|RNF146|81847|ring finger protein 146##NM_001242844|RNF146|81847|ring finger protein 146##NM_001242849|RNF146|81847|ring finger protein 146##NM_001242852|RNF146|81847|ring finger protein 146##NM_001242845|RNF146|81847|ring finger protein 146##NM_001242846|RNF146|81847|ring finger protein 146##NM_001242850|RNF146|81847|ring finger protein 146##NM_030963|RNF146|81847|ring finger protein 146##NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3##AK025796|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001139510|ECHDC1|55862|enoyl CoA hydratase domain containing 1##AK025760|ECHDC1|55862|enoyl CoA hydratase domain containing 1##AK303812|ECHDC1|55862|enoyl CoA hydratase domain containing 1	0.98468	CTCF.p2:-2:0.985
chr12	109865952	109866083	reg1013245.p1	9.978	+	NM_001101421	-39494	+	AK131519 BC113073 BC146825 NM_213596 TSC_hg19_v1_chr12_-_109747027	-118984	-	TSC_hg19_v1_chr12_+_109665176 U34591	-200799	+	AF113208 BC040062 TSC_hg19_v1_chr12_-_109915106 AK056912 AK222548	49090	-	TSC_hg19_v1_chr12_-_109915133 AK092170 AX747390 AK027543 AY205299 NM_031954	49125	-	TSC_hg19_v1_chr12_+_109915438 BX537403 NM_130466 NM_183415 AK307385	49419	+	NM_001101421|MYO1H|283446|myosin IH##AK131519|FOXN4|121643|forkhead box N4##BC113073|FOXN4|121643|forkhead box N4##BC146825|FOXN4|121643|forkhead box N4##NM_213596|FOXN4|121643|forkhead box N4##U34591|ACACB|32|acetyl-CoA carboxylase beta##AF113208|KCTD10|83892|potassium channel tetramerisation domain containing 10##BC040062|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK056912|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK222548|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK092170|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK027543|KCTD10|83892|potassium channel tetramerisation domain containing 10##AY205299|KCTD10|83892|potassium channel tetramerisation domain containing 10##NM_031954|KCTD10|83892|potassium channel tetramerisation domain containing 10##BX537403|UBE3B|89910|ubiquitin protein ligase E3B##NM_130466|UBE3B|89910|ubiquitin protein ligase E3B##NM_183415|UBE3B|89910|ubiquitin protein ligase E3B##AK307385|UBE3B|89910|ubiquitin protein ligase E3B	1.10918	CTCF.p2:-2:1.000
chr8	140718150	140718284	reg1011689.p1	9.978	+	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	-2935	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	-791973	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-1209111	-	AB067469 TSC_hg19_v1_chr8_-_141467841	749608	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	749641	-	AK128755 NM_031466	750460	-	AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9##AK128755|TRAPPC9|83696|trafficking protein particle complex 9##NM_031466|TRAPPC9|83696|trafficking protein particle complex 9	0.999426	CTCF.p2:-8:0.999
chr8	55078461	55078576	reg1005068.p1	9.978	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-30707	+	TSC_hg19_v1_chr8_-_55014465 CR457103 CU679013 DQ891527 DQ894717 BC010397 AF077198 AF077199 AF291053 AK307277 AK313739 AF081281 AK298206 AK289400 BC008652 AF052112 NM_006330	-64020	-	TSC_hg19_v1_chr8_-_54934990 NM_006756 NM_201437	-143499	-	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	291998	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	450134	+	BC106028 AY534241 NM_052898	936496	+	BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##CR457103|LYPLA1|10434|lysophospholipase I##DQ891527|LYPLA1|10434|lysophospholipase I##DQ894717|LYPLA1|10434|lysophospholipase I##BC010397|LYPLA1|10434|lysophospholipase I##AF077198|LYPLA1|10434|lysophospholipase I##AF077199|LYPLA1|10434|lysophospholipase I##AF291053|LYPLA1|10434|lysophospholipase I##AK307277|LYPLA1|10434|lysophospholipase I##AK313739|LYPLA1|10434|lysophospholipase I##AF081281|LYPLA1|10434|lysophospholipase I##AK298206|LYPLA1|10434|lysophospholipase I##AK289400|LYPLA1|10434|lysophospholipase I##BC008652|LYPLA1|10434|lysophospholipase I##AF052112|LYPLA1|10434|lysophospholipase I##NM_006330|LYPLA1|10434|lysophospholipase I##NM_006756|TCEA1|6917|transcription elongation factor A (SII), 1##NM_201437|TCEA1|6917|transcription elongation factor A (SII), 1##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4	0.597619	CTCF.p2:-1:0.598
chr1	64734882	64735002	reg1013622.p1	9.977	+	BC029895 NM_152489	-65453	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	-495283	+	NM_001172818 AK300100	-646049	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	201576	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	475857	+	TSC_hg19_v1_chr1_-_65432181 BC062431 BC009079 NM_002227	697072	-	BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##NM_020925|CACHD1|57685|cache domain containing 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2##BC062431|JAK1|3716|Janus kinase 1##BC009079|JAK1|3716|Janus kinase 1##NM_002227|JAK1|3716|Janus kinase 1	0.991775	CTCF.p2:-13:0.992
chr1	66912265	66912331	reg1009402.p1	9.977	+	TSC_hg19_v1_chr1_+_66798096 AK294441	-114203	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	-114445	+	AB209081 NM_001037340 AK290006	-453895	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	87586	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	305826	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	305867	+	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1	0.986617	CTCF.p2:-8:0.987
chr16	89355991	89356126	reg1011389.p2	9.977	+	BC041585 TSC_hg19_v1_chr16_-_89351073	-5102	-	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	-5984	-	TSC_hg19_v1_chr16_+_89284112 NM_001201407 NM_182531 AK056437 AK295122	-71931	+	AK293862 NM_001242885	31482	+	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	200873	-	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	218756	+	BC041585|ANKRD11|29123|ankyrin repeat domain 11##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##NM_001201407|ZNF778|197320|zinc finger protein 778##NM_182531|ZNF778|197320|zinc finger protein 778##AK056437|ZNF778|197320|zinc finger protein 778##AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)	0.992703	CTCF.p2:-10:0.993
chr9	74219502	74219630	reg1013310.p1	9.977	+	AL136545 TSC_hg19_v1_chr9_-_74061901	-157683	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	-483030	-	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	-735606	-	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	164012	-	AF151825 TSC_hg19_v1_chr9_-_74525994	306359	-	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	306590	-	AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2##AF151825|FAM108B1|51104|family with sequence similarity 108, member B1##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1	0.811802	CTCF.p2:0:0.812
chr1	77592050	77592159	reg1012169.p1	9.976	+	TSC_hg19_v1_chr1_+_77333164 AK095758 AK300902 AK295019 BC001201 NM_030965	-258933	+	TSC_hg19_v1_chr1_+_77333125 AK056241	-258977	+	TSC_hg19_v1_chr1_+_77165439 D28460	-426664	+	Y07596 CU676676 AF022913 BC020737 TSC_hg19_v1_chr1_-_77685112 BC026186 AK304340 AK313015 BX648473 NM_005482	92999	-	TSC_hg19_v1_chr1_+_77747603 AF445193 NM_174858	155527	+	TSC_hg19_v1_chr1_+_77747727 BC036666 AK090967 AX746708	155630	+	AK095758|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK300902|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK295019|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##BC001201|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##NM_030965|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK056241|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##D28460|TPI1|7167|triosephosphate isomerase 1##Y07596|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AF022913|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##BC020737|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##BC026186|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AK304340|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AK313015|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##BX648473|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##NM_005482|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AF445193|AK5|26289|adenylate kinase 5##NM_174858|AK5|26289|adenylate kinase 5##BC036666|AK5|26289|adenylate kinase 5##AK090967|AK5|26289|adenylate kinase 5	0.084624	
chr2	37012457	37012570	reg1010841.p1	9.976	+	TSC_hg19_v1_chr2_+_36923944 BC061519 AK056772 AK292149 AY358338 AL832679 AF063833 BC128260	-88553	+	NM_001177969 NM_001177970 NM_001177971 NM_001177972 NM_053276 AK299426 TSC_hg19_v1_chr2_+_36923849	-88667	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	-187231	-	TSC_hg19_v1_chr2_-_37076016 BC015406	63517	-	AB590635 BC106879 AJ223814 BC106878 NM_003162 TSC_hg19_v1_chr2_-_37193662	181122	-	TSC_hg19_v1_chr2_-_37297372 BX538008	284931	-	BC061519|VIT|5212|vitrin##AK056772|VIT|5212|vitrin##AK292149|VIT|5212|vitrin##AY358338|VIT|5212|vitrin##AL832679|VIT|5212|vitrin##AF063833|VIT|5212|vitrin##BC128260|VIT|5212|vitrin##NM_001177969|VIT|5212|vitrin##NM_001177970|VIT|5212|vitrin##NM_001177971|VIT|5212|vitrin##NM_001177972|VIT|5212|vitrin##NM_053276|VIT|5212|vitrin##AK299426|VIT|5212|vitrin##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC015406|STRN|6801|striatin, calmodulin binding protein##BC106879|STRN|6801|striatin, calmodulin binding protein##AJ223814|STRN|6801|striatin, calmodulin binding protein##BC106878|STRN|6801|striatin, calmodulin binding protein##NM_003162|STRN|6801|striatin, calmodulin binding protein##BX538008|HEATR5B|54497|HEAT repeat containing 5B	0.999817	CTCF.p2:0:1.000
chr2	114128214	114128348	reg1011519.p2	9.975	+	S77904 S77905 S77906 X69699 BC001060 AK292191 AK309154 AK225538 NM_003466 NM_013952 NM_013953 NM_013992 TSC_hg19_v1_chr2_-_114036499	-91788	-	TSC_hg19_v1_chr2_+_113993123 AK056052 AK307781 BX537688 AK056355 AK130275	-135011	+	TSC_hg19_v1_chr2_+_113931576 BC035307 BC073151	-196700	+	AK290072 NM_172003 AK303653 AY343910 TSC_hg19_v1_chr2_+_114195398 AY320414 BC120991 BC120992 AK225251 AF452722	67058	+	AK122950 NM_012184 BC136428 AY344639 AF452723	128455	+	AL137714 AK302089 AK308574 TSC_hg19_v1_chr2_+_114341674	213336	+	S77904|PAX8|7849|paired box 8##S77905|PAX8|7849|paired box 8##S77906|PAX8|7849|paired box 8##X69699|PAX8|7849|paired box 8##BC001060|PAX8|7849|paired box 8##AK292191|PAX8|7849|paired box 8##AK309154|PAX8|7849|paired box 8##AK225538|PAX8|7849|paired box 8##NM_003466|PAX8|7849|paired box 8##NM_013952|PAX8|7849|paired box 8##NM_013953|PAX8|7849|paired box 8##NM_013992|PAX8|7849|paired box 8##AK056052|LOC654433|654433|uncharacterized LOC654433##AK307781|LOC654433|654433|uncharacterized LOC654433##BX537688|LOC654433|654433|uncharacterized LOC654433##AK056355|LOC654433|654433|uncharacterized LOC654433##AK130275|LOC654433|654433|uncharacterized LOC654433##BC035307|PSD4|23550|pleckstrin and Sec7 domain containing 4##BC073151|PSD4|23550|pleckstrin and Sec7 domain containing 4##AK290072|CBWD2|150472|COBW domain containing 2##NM_172003|CBWD2|150472|COBW domain containing 2##AK303653|CBWD2|150472|COBW domain containing 2##AY343910|CBWD2|150472|COBW domain containing 2##AY320414|CBWD1|55871|COBW domain containing 1##BC120991|CBWD2|150472|COBW domain containing 2##BC120992|CBWD2|150472|COBW domain containing 2##AK225251|CBWD2|150472|COBW domain containing 2##AF452722|CBWD2|150472|COBW domain containing 2##AK122950|FOXD4L1|200350|forkhead box D4-like 1##NM_012184|FOXD4L1|200350|forkhead box D4-like 1##BC136428|FOXD4L1|200350|forkhead box D4-like 1##AY344639|FOXD4L1|200350|forkhead box D4-like 1##AF452723|FOXD4L1|200350|forkhead box D4-like 1##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene	0.854187	CTCF.p2:15:0.854
chr10	28539827	28539965	reg1012109.p1	9.974	+	AK292521 TSC_hg19_v1_chr10_-_28287879 AK001679 NM_018076 BC085611	-252012	-	BC036207 TSC_hg19_v1_chr10_-_28034752 AK125339 NM_001242702 NM_173576	-505135	-	TSC_hg19_v1_chr10_+_27793232 AY574034 AK295443 AK297629 AK299457 BC029350 AF087860 BC015014 NM_021252 AL136734 AK223153 AB464117 AF137372 AF498950 AK001555 AM393142 BT009840 CR533455 CU677165	-746667	+	BC038105 AK057360 NM_173496	31144	-	TSC_hg19_v1_chr10_-_28591994 AK315046 AK301592	52036	-	BC043365 TSC_hg19_v1_chr10_-_28821677	281699	-	AK292521|ARMC4|55130|armadillo repeat containing 4##AK001679|ARMC4|55130|armadillo repeat containing 4##NM_018076|ARMC4|55130|armadillo repeat containing 4##BC085611|ARMC4|55130|armadillo repeat containing 4##BC036207|MKX|283078|mohawk homeobox##AK125339|MKX|283078|mohawk homeobox##NM_001242702|MKX|283078|mohawk homeobox##NM_173576|MKX|283078|mohawk homeobox##AY574034|RAB18|22931|RAB18, member RAS oncogene family##AK295443|RAB18|22931|RAB18, member RAS oncogene family##AK297629|RAB18|22931|RAB18, member RAS oncogene family##AK299457|RAB18|22931|RAB18, member RAS oncogene family##BC029350|RAB18|22931|RAB18, member RAS oncogene family##AF087860|RAB18|22931|RAB18, member RAS oncogene family##BC015014|RAB18|22931|RAB18, member RAS oncogene family##NM_021252|RAB18|22931|RAB18, member RAS oncogene family##AL136734|RAB18|22931|RAB18, member RAS oncogene family##AK223153|RAB18|22931|RAB18, member RAS oncogene family##AF137372|RAB18|22931|RAB18, member RAS oncogene family##AF498950|RAB18|22931|RAB18, member RAS oncogene family##AK001555|RAB18|22931|RAB18, member RAS oncogene family##AM393142|RAB18|22931|RAB18, member RAS oncogene family##BT009840|RAB18|22931|RAB18, member RAS oncogene family##CR533455|RAB18|22931|RAB18, member RAS oncogene family##BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##BC043365|LOC220906|220906|uncharacterized LOC220906	0.28715	CTCF.p2:0:0.287
chr16	22960232	22960354	reg1011618.p2	9.974	+	AB209794 AF105374 AF105375 NM_006043 BC093734 BC093736	-134442	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	-134791	+	NM_001135865 BC036263 AK296338 CU690320	-435311	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	200256	-	U48936 BC059391 NM_001039 TSC_hg19_v1_chr16_+_23194066	233759	+	NM_000336 BC036352 X87159 AK313192	353334	+	AB209794|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105374|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105375|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_006043|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093734|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093736|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_001135865|LOC100132247|100132247|nuclear pore complex interacting protein related gene##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296338|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31##U48936|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##BC059391|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_001039|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_000336|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC036352|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##X87159|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##AK313192|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta	0.913634	CTCF.p2:3:0.914
chr16	84788093	84788253	reg1013849.p1	9.974	+	TSC_hg19_v1_chr16_+_84733611 AL162049 BX537402 D80012	-54543	+	TSC_hg19_v1_chr16_+_84733609 AK293304 AK299618	-54566	+	TSC_hg19_v1_chr16_+_84733603 AK315570 CR749515	-54573	+	TSC_hg19_v1_chr16_+_84853586 NM_031476 AY358790 AK303887 AK308396 AY358413 BC063012 BC007689 AL136861 AK027395	65430	+	TSC_hg19_v1_chr16_-_85045098 AK225768	256920	-	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	256956	-	AL162049|USP10|9100|ubiquitin specific peptidase 10##BX537402|USP10|9100|ubiquitin specific peptidase 10##D80012|USP10|9100|ubiquitin specific peptidase 10##AK293304|USP10|9100|ubiquitin specific peptidase 10##AK299618|USP10|9100|ubiquitin specific peptidase 10##AK315570|USP10|9100|ubiquitin specific peptidase 10##CR749515|USP10|9100|ubiquitin specific peptidase 10##NM_031476|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AY358790|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK303887|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK308396|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC063012|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC007689|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AL136861|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK027395|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK225768|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7	0.308378	CTCF.p2:-4:0.308
chr17	32869888	32870008	reg1011404.p1	9.974	+	AB528767 BC105073 BC105075 M57502 AK312183 NM_002981	-179733	-	NM_005408 U59808 AJ001634 BC008621 U46767 X98306 AB463483 CU679005 DQ891497 DQ894688 BT007385 CR450337 Z77650	-186417	+	Y16645 NM_005623	-223887	+	BC133004 BC136710 BC142651 AK126768 NM_207454	36404	-	NM_207313	37819	+	CU693272 AK301773 TSC_hg19_v1_chr17_-_33288425 AK225729 BC026125 AK225728 D78333	418487	-	BC105073|CCL1|6346|chemokine (C-C motif) ligand 1##BC105075|CCL1|6346|chemokine (C-C motif) ligand 1##M57502|CCL1|6346|chemokine (C-C motif) ligand 1##AK312183|CCL1|6346|chemokine (C-C motif) ligand 1##NM_002981|CCL1|6346|chemokine (C-C motif) ligand 1##NM_005408|CCL13|6357|chemokine (C-C motif) ligand 13##U59808|CCL13|6357|chemokine (C-C motif) ligand 13##AJ001634|CCL13|6357|chemokine (C-C motif) ligand 13##BC008621|CCL13|6357|chemokine (C-C motif) ligand 13##U46767|CCL13|6357|chemokine (C-C motif) ligand 13##X98306|CCL13|6357|chemokine (C-C motif) ligand 13##DQ891497|CCL13|6357|chemokine (C-C motif) ligand 13##DQ894688|CCL13|6357|chemokine (C-C motif) ligand 13##BT007385|CCL13|6357|chemokine (C-C motif) ligand 13##CR450337|CCL13|6357|chemokine (C-C motif) ligand 13##Z77650|CCL13|6357|chemokine (C-C motif) ligand 13##Y16645|CCL8|6355|chemokine (C-C motif) ligand 8##NM_005623|CCL8|6355|chemokine (C-C motif) ligand 8##BC133004|C17orf102|400591|chromosome 17 open reading frame 102##BC136710|C17orf102|400591|chromosome 17 open reading frame 102##BC142651|C17orf102|400591|chromosome 17 open reading frame 102##AK126768|C17orf102|400591|chromosome 17 open reading frame 102##NM_207454|C17orf102|400591|chromosome 17 open reading frame 102##NM_207313|TMEM132E|124842|transmembrane protein 132E##AK301773|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225729|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC026125|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225728|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##D78333|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)	0.908219	CTCF.p2:-12:0.908
chr18	25185330	25185452	reg1011707.p1	9.974	+	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-420158	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	-462512	-	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	-739675	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	571646	-	TSC_hg19_v1_chr18_-_25757363 NM_001792	572006	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	3437311	-	AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3	0.999441	CTCF.p2:-8:0.999
chr6	88541792	88541911	reg1008736.p1	9.974	+	AK001204 NM_018064 TSC_hg19_v1_chr6_-_88411988	-129863	-	TSC_hg19_v1_chr6_-_88411949 AK222701	-129903	-	TSC_hg19_v1_chr6_-_88411885 BC000764 BC003042	-129942	-	BC029488 NM_030960 AF203447	215679	+	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	313185	-	NM_001160226 NM_001160258 NM_001160259 NM_016083	333915	-	AK001204|AKIRIN2|55122|akirin 2##NM_018064|AKIRIN2|55122|akirin 2##AK222701|AKIRIN2|55122|akirin 2##BC000764|AKIRIN2|55122|akirin 2##BC003042|AKIRIN2|55122|akirin 2##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)	0.081563	
chr11	250880	250997	reg1011340.p1	9.973	+	TSC_hg19_v1_chr11_+_236975 AK295944 AK094775 AK222895 AB009398 BC001100 AF083245 AK307447 AF107837 BC001747 BX647314 AB528493 DQ892171 DQ895365 AF086708 BT007307	-13931	+	AK316175 TSC_hg19_v1_chr11_-_236906 AK308681	-14049	-	NM_002817 NM_175932	-14131	+	AF479748 AY154461 NM_138329	27631	+	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	38204	+	BC150562 BC150563 NM_001025295	48583	-	AK295944|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK094775|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK222895|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AB009398|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001100|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF083245|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK307447|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF107837|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001747|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BX647314|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ892171|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ895365|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF086708|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BT007307|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK316175|SIRT3|23410|sirtuin 3##AK308681|SIRT3|23410|sirtuin 3##NM_002817|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##NM_175932|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF479748|NLRP6|171389|NLR family, pyrin domain containing 6##AY154461|NLRP6|171389|NLR family, pyrin domain containing 6##NM_138329|NLRP6|171389|NLR family, pyrin domain containing 6##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5	0.219661	CTCF.p2:-19:0.220
chr1	153195675	153195784	reg1011412.p1	9.973	+	NM_001195571	-5670	+	NM_001010857 BC130507 BC130511 BC087854	-19788	+	BC130455 BC133041 NM_001014291	-72303	-	BC108290 NM_000427	36449	+	BC128114 BC128115 BC069741 BC069798 BC069801 AY035376 NM_052891	87450	-	AY035377 NM_020393 AF242518	125303	-	NM_001195571|PRR9|574414|proline rich 9##NM_001010857|LELP1|149018|late cornified envelope-like proline-rich 1##BC130507|LELP1|149018|late cornified envelope-like proline-rich 1##BC130511|LELP1|149018|late cornified envelope-like proline-rich 1##BC087854|LELP1|149018|late cornified envelope-like proline-rich 1##BC130455|SPRR2G|6706|small proline-rich protein 2G##BC133041|SPRR2G|6706|small proline-rich protein 2G##NM_001014291|SPRR2G|6706|small proline-rich protein 2G##BC108290|LOR|4014|loricrin##NM_000427|LOR|4014|loricrin##BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3##BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3##NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035377|PGLYRP4|57115|peptidoglycan recognition protein 4##NM_020393|PGLYRP4|57115|peptidoglycan recognition protein 4##AF242518|PGLYRP4|57115|peptidoglycan recognition protein 4	0.99838	CTCF.p2:-7:0.998
chr9	21709612	21709734	reg1010286.p2	9.973	+	AK124391 TSC_hg19_v1_chr9_-_21559834	-149891	-	AY358570 NM_176891	-227362	-	NM_024013 V00538 V00537 BC112300 BC112302 BC074928 BC074929 AB464595 CU686802 HQ258738 JN848523	-269194	+	TSC_hg19_v1_chr9_+_21802647 AF109294 AY712791 NM_002451 U22233 L40432 AK300592 AK309365	92967	+	BC026106 TSC_hg19_v1_chr9_+_21802660 BC012316 BC018625	92991	+	TSC_hg19_v1_chr9_+_21802691 CU693136 CR541670 CR541710	93044	+	AK124391|MIR31HG|554202|MIR31 host gene (non-protein coding)##AY358570|IFNE|338376|interferon, epsilon##NM_176891|IFNE|338376|interferon, epsilon##NM_024013|IFNA1|3439|interferon, alpha 1##V00538|IFNA1|3439|interferon, alpha 1##V00537|IFNA1|3439|interferon, alpha 1##BC112300|IFNA1|3439|interferon, alpha 1##BC112302|IFNA1|3439|interferon, alpha 1##BC074928|IFNA1|3439|interferon, alpha 1##BC074929|IFNA1|3439|interferon, alpha 1##HQ258738|IFNA1|3439|interferon, alpha 1##AF109294|MTAP|4507|methylthioadenosine phosphorylase##AY712791|MTAP|4507|methylthioadenosine phosphorylase##NM_002451|MTAP|4507|methylthioadenosine phosphorylase##U22233|MTAP|4507|methylthioadenosine phosphorylase##L40432|MTAP|4507|methylthioadenosine phosphorylase##AK300592|MTAP|4507|methylthioadenosine phosphorylase##AK309365|MTAP|4507|methylthioadenosine phosphorylase##BC026106|MTAP|4507|methylthioadenosine phosphorylase##BC012316|MTAP|4507|methylthioadenosine phosphorylase##BC018625|MTAP|4507|methylthioadenosine phosphorylase##CR541670|MTAP|4507|methylthioadenosine phosphorylase##CR541710|MTAP|4507|methylthioadenosine phosphorylase	0.993262	CTCF.p2:-11:0.993
chr20	30619238	30619379	reg1004132.p1	9.972	+	NM_080625 AK057090 BC030254	-21060	+	AY534245 NM_001011718 TSC_hg19_v1_chr20_+_30555960	-63419	+	TSC_hg19_v1_chr20_-_30539856 NM_030815 AY286301	-79437	-	TSC_hg19_v1_chr20_+_30640055 NM_001172129 NM_001172130 NM_001172131 NM_001172132 NM_001172133 NM_002110 AK289896 AK225819 AK290928 AK298726 AK026432 BC108930 BC108931 BC113854 BC114463 AK314335 BC073748 BC094847 BC014435	20738	+	TSC_hg19_v1_chr20_+_30697308 NM_014742	78061	+	TSC_hg19_v1_chr20_+_30697532 AK126534 AK294980 AK296500 AK302439 BC021107 D87444	78233	+	NM_080625|C20orf160|140706|chromosome 20 open reading frame 160##AK057090|C20orf160|140706|chromosome 20 open reading frame 160##BC030254|C20orf160|140706|chromosome 20 open reading frame 160##AY534245|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_001011718|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_030815|PDRG1|81572|p53 and DNA-damage regulated 1##AY286301|PDRG1|81572|p53 and DNA-damage regulated 1##NM_001172129|HCK|3055|hemopoietic cell kinase##NM_001172130|HCK|3055|hemopoietic cell kinase##NM_001172131|HCK|3055|hemopoietic cell kinase##NM_001172132|HCK|3055|hemopoietic cell kinase##NM_001172133|HCK|3055|hemopoietic cell kinase##NM_002110|HCK|3055|hemopoietic cell kinase##AK289896|HCK|3055|hemopoietic cell kinase##AK225819|HCK|3055|hemopoietic cell kinase##AK290928|HCK|3055|hemopoietic cell kinase##AK298726|HCK|3055|hemopoietic cell kinase##AK026432|HCK|3055|hemopoietic cell kinase##BC108930|HCK|3055|hemopoietic cell kinase##BC108931|HCK|3055|hemopoietic cell kinase##BC113854|HCK|3055|hemopoietic cell kinase##BC114463|HCK|3055|hemopoietic cell kinase##AK314335|HCK|3055|hemopoietic cell kinase##BC073748|HCK|3055|hemopoietic cell kinase##BC094847|HCK|3055|hemopoietic cell kinase##BC014435|HCK|3055|hemopoietic cell kinase##NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4##BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4##D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4	0.306161	CTCF.p2:-13:0.306
chr5	94980114	94980232	reg1011190.p1	9.972	+	JF810884 NM_199243	-24194	+	AK303855 TSC_hg19_v1_chr5_+_94890804 AK316253 NM_198150 AY358596 BC050392 BC015723 BC130329 BC144160 BC144161 BC080567 BC036047 AY875939 HQ258292	-89294	+	TSC_hg19_v1_chr5_-_94890682 BC009767 AK307531 BC030966 BC056893 AB002370 NM_014639	-89486	-	NM_001131066 BC048979 NM_001131065 NM_173362 BC035110	2359	+	AY027526 AK292338 AK310260 BC047333 AK093225 AX747999 BC032832 NM_031952	38513	-	TSC_hg19_v1_chr5_+_95067066 BC047884 NM_014899 BC020231 BC013169 BC041337 AB020685 AK290034	86695	+	JF810884|GPR150|285601|G protein-coupled receptor 150##NM_199243|GPR150|285601|G protein-coupled receptor 150##AK303855|ARSK|153642|arylsulfatase family, member K##AK316253|ARSK|153642|arylsulfatase family, member K##NM_198150|ARSK|153642|arylsulfatase family, member K##AY358596|ARSK|153642|arylsulfatase family, member K##BC050392|ARSK|153642|arylsulfatase family, member K##BC130329|ARSK|153642|arylsulfatase family, member K##BC144160|ARSK|153642|arylsulfatase family, member K##BC144161|ARSK|153642|arylsulfatase family, member K##BC036047|ARSK|153642|arylsulfatase family, member K##AY875939|ARSK|153642|arylsulfatase family, member K##HQ258292|ARSK|153642|arylsulfatase family, member K##BC009767|TTC37|9652|tetratricopeptide repeat domain 37##AK307531|TTC37|9652|tetratricopeptide repeat domain 37##BC030966|TTC37|9652|tetratricopeptide repeat domain 37##BC056893|TTC37|9652|tetratricopeptide repeat domain 37##AB002370|TTC37|9652|tetratricopeptide repeat domain 37##NM_014639|TTC37|9652|tetratricopeptide repeat domain 37##NM_001131066|RFESD|317671|Rieske (Fe-S) domain containing##BC048979|RFESD|317671|Rieske (Fe-S) domain containing##NM_001131065|RFESD|317671|Rieske (Fe-S) domain containing##NM_173362|RFESD|317671|Rieske (Fe-S) domain containing##BC035110|RFESD|317671|Rieske (Fe-S) domain containing##AY027526|SPATA9|83890|spermatogenesis associated 9##AK292338|SPATA9|83890|spermatogenesis associated 9##AK310260|SPATA9|83890|spermatogenesis associated 9##BC047333|SPATA9|83890|spermatogenesis associated 9##AK093225|SPATA9|83890|spermatogenesis associated 9##BC032832|SPATA9|83890|spermatogenesis associated 9##NM_031952|SPATA9|83890|spermatogenesis associated 9##BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3##NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3##BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3##BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3##BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3##AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3##AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3	0.924505	CTCF.p2:26:0.925
chr11	61822126	61822231	reg1011566.p2	9.971	+	TSC_hg19_v1_chr11_+_61735277 AK093779 AX748301 BC132894 BC132896	-86844	+	TSC_hg19_v1_chr11_-_61735173 NM_002032	-87031	-	BC020300 BC015946 BC063514 TSC_hg19_v1_chr11_-_61735103 BC011359 BC070494 AB062402 BC013724 BC073750 BC000857 BC035441 AK307190 AK311818 BC016009 BC066341 BC066961 BC104643 BC105802 L20941 D28463	-87091	-	TSC_hg19_v1_chr11_+_61891482 AK307633 BC098576 NM_001040694 NM_020238 AK056195 AK310714 BC032678	69294	+	BC062693 AJ224171 BC069170 BC069289 NM_006552	135520	+	AF071219 NM_002407 BC062218 AJ224173	153973	+	AK093779|LOC399900|399900|uncharacterized LOC399900##BC132894|LOC399900|399900|uncharacterized LOC399900##BC132896|LOC399900|399900|uncharacterized LOC399900##NM_002032|FTH1|2495|ferritin, heavy polypeptide 1##BC020300|FTH1|2495|ferritin, heavy polypeptide 1##BC015946|FTH1|2495|ferritin, heavy polypeptide 1##BC063514|FTH1|2495|ferritin, heavy polypeptide 1##BC011359|FTH1|2495|ferritin, heavy polypeptide 1##BC070494|FTH1|2495|ferritin, heavy polypeptide 1##AB062402|FTH1|2495|ferritin, heavy polypeptide 1##BC013724|FTH1|2495|ferritin, heavy polypeptide 1##BC073750|FTH1|2495|ferritin, heavy polypeptide 1##BC000857|FTH1|2495|ferritin, heavy polypeptide 1##BC035441|FTH1|2495|ferritin, heavy polypeptide 1##AK307190|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK311818|FTH1|2495|ferritin, heavy polypeptide 1##BC016009|FTH1|2495|ferritin, heavy polypeptide 1##BC066341|FTH1|2495|ferritin, heavy polypeptide 1##BC066961|FTH1|2495|ferritin, heavy polypeptide 1##BC104643|FTH1|2495|ferritin, heavy polypeptide 1##BC105802|FTH1|2495|ferritin, heavy polypeptide 1##L20941|FTH1|2495|ferritin, heavy polypeptide 1##D28463|FTH1|2495|ferritin, heavy polypeptide 1##AK307633|INCENP|3619|inner centromere protein antigens 135/155kDa##BC098576|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_001040694|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_020238|INCENP|3619|inner centromere protein antigens 135/155kDa##AK056195|INCENP|3619|inner centromere protein antigens 135/155kDa##AK310714|INCENP|3619|inner centromere protein antigens 135/155kDa##BC032678|INCENP|3619|inner centromere protein antigens 135/155kDa##BC062693|SCGB1D1|10648|secretoglobin, family 1D, member 1##AJ224171|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069170|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069289|SCGB1D1|10648|secretoglobin, family 1D, member 1##NM_006552|SCGB1D1|10648|secretoglobin, family 1D, member 1##AF071219|SCGB2A1|4246|secretoglobin, family 2A, member 1##NM_002407|SCGB2A1|4246|secretoglobin, family 2A, member 1##BC062218|SCGB2A1|4246|secretoglobin, family 2A, member 1##AJ224173|SCGB2A1|4246|secretoglobin, family 2A, member 1	0.013031	
chr15	45569177	45569293	reg1007623.p1	9.971	+	AK222709 NM_004212 U84392 AK291974	-24794	+	AK096267 NM_138356	-75863	-	TSC_hg19_v1_chr15_-_45480165 AK094391 AK303749	-89071	-	TSC_hg19_v1_chr15_-_45670743 CU678590 S68805 BC004141 AK098055 AK223585 AK294995 AK298350	101504	-	TSC_hg19_v1_chr15_-_45670958 NM_001482	101732	-	NM_024063 TSC_hg19_v1_chr15_+_45694551 AK291457 AK023232 AK225463 BC051861 BC000981 AK022348	125317	+	AK222709|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##NM_004212|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##U84392|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK291974|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK096267|SHF|90525|Src homology 2 domain containing F##NM_138356|SHF|90525|Src homology 2 domain containing F##AK094391|SHF|90525|Src homology 2 domain containing F##AK303749|SHF|90525|Src homology 2 domain containing F##S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##NM_024063|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK291457|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK023232|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK225463|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC051861|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC000981|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK022348|SPATA5L1|79029|spermatogenesis associated 5-like 1	0.26	CTCF.p2:33:0.260
chr16	2957189	2957302	reg1011395.p1	9.971	+	NM_001142499 NM_001142500 NM_138439 TSC_hg19_v1_chr16_+_2933215 BC014089	-23989	+	CU679465 AB010779 AF321182 BC009726 AY358396 NM_022119	-49108	-	NM_145252 AY359021 JN411265 BC009722 AB528168 AM392915 AM393869 EF067313 AK311810	-77007	+	TSC_hg19_v1_chr16_+_2961983 BC028572 NM_020912 NM_032296	4719	+	TSC_hg19_v1_chr16_+_2961994 AB046772	4752	+	BC009383 NM_001253725 NM_001253726 NM_024507 NM_172229 AK075033 AK301953 AK027669 BC003533 AK223422 AB086355 AB086356 AB086357 AB086405 DQ896447	57123	+	NM_001142499|FLYWCH2|114984|FLYWCH family member 2##NM_001142500|FLYWCH2|114984|FLYWCH family member 2##NM_138439|FLYWCH2|114984|FLYWCH family member 2##BC014089|FLYWCH2|114984|FLYWCH family member 2##AB010779|PRSS22|64063|protease, serine, 22##AF321182|PRSS22|64063|protease, serine, 22##BC009726|PRSS22|64063|protease, serine, 22##AY358396|PRSS22|64063|protease, serine, 22##NM_022119|PRSS22|64063|protease, serine, 22##NM_145252|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AY359021|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##JN411265|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC009722|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM392915|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM393869|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##EF067313|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AK311810|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC028572|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_020912|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_032296|FLYWCH1|84256|FLYWCH-type zinc finger 1##AB046772|FLYWCH1|84256|FLYWCH-type zinc finger 1##BC009383|KREMEN2|79412|kringle containing transmembrane protein 2##NM_001253725|KREMEN2|79412|kringle containing transmembrane protein 2##NM_001253726|KREMEN2|79412|kringle containing transmembrane protein 2##NM_024507|KREMEN2|79412|kringle containing transmembrane protein 2##NM_172229|KREMEN2|79412|kringle containing transmembrane protein 2##AK075033|KREMEN2|79412|kringle containing transmembrane protein 2##AK301953|KREMEN2|79412|kringle containing transmembrane protein 2##AK027669|KREMEN2|79412|kringle containing transmembrane protein 2##BC003533|KREMEN2|79412|kringle containing transmembrane protein 2##AK223422|KREMEN2|79412|kringle containing transmembrane protein 2##AB086355|KREMEN2|79412|kringle containing transmembrane protein 2##AB086356|KREMEN2|79412|kringle containing transmembrane protein 2##AB086357|KREMEN2|79412|kringle containing transmembrane protein 2##AB086405|KREMEN2|79412|kringle containing transmembrane protein 2##DQ896447|KREMEN2|79412|kringle containing transmembrane protein 2	0.830069	CTCF.p2:10:0.830
chr8	67334096	67334235	reg1013591.p1	9.971	+	BC002599 BC011031 AK075431 NM_000756	-243398	-	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	-294825	+	NM_033105 BC016742 AF368276 AL133660	-400346	+	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	7141	+	NM_144650 AY033237 AK056992 AK300881 BC047492 BC064634 AK293530 AK300243 AK294114 BC110290	10567	+	NM_152765	71325	+	BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone##AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_144650|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AY033237|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK056992|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300881|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC047492|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC064634|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK293530|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300243|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK294114|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC110290|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##NM_152765|C8orf46|254778|chromosome 8 open reading frame 46	0.093468	
chr21	37794663	37794773	reg1011578.p2	9.970	+	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	-37028	+	TSC_hg19_v1_chr21_+_37692548 BC058002 NM_015358 AK295133 BC007311 D50926 BC094779 BC132731 BC144116 AK292957 AB489143	-102199	+	AJ237839 NM_005128	-257880	+	BC012126 NM_012130 AY355349	44013	-	AF314090 AY355348 NM_001146079 NM_144492	57669	-	AJ566765 NM_001146078	120179	-	NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC058002|MORC3|23515|MORC family CW-type zinc finger 3##NM_015358|MORC3|23515|MORC family CW-type zinc finger 3##AK295133|MORC3|23515|MORC family CW-type zinc finger 3##BC007311|MORC3|23515|MORC family CW-type zinc finger 3##D50926|MORC3|23515|MORC family CW-type zinc finger 3##BC094779|MORC3|23515|MORC family CW-type zinc finger 3##BC132731|MORC3|23515|MORC family CW-type zinc finger 3##BC144116|MORC3|23515|MORC family CW-type zinc finger 3##AK292957|MORC3|23515|MORC family CW-type zinc finger 3##AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14##AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14##AJ566765|CLDN14|23562|claudin 14##NM_001146078|CLDN14|23562|claudin 14	0.99883	CTCF.p2:1:0.999
chr3	149212110	149212226	reg1012202.p1	9.970	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-19679	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-19766	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-116626	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	163567	-	AK022036 NM_001168278	208891	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	258071	-	AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2	0.668569	CTCF.p2:-13:0.669
chr7	158387911	158388012	reg1011671.p2	9.970	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	-7508	-	TSC_hg19_v1_chr7_+_157647233 BC034557	-740687	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	-1258250	+	BC028618 TSC_hg19_v1_chr7_-_158497496 AK092008 AX747307 BC043404 BX537845 NM_017760	109516	-	TSC_hg19_v1_chr7_-_158611303 AK126214	223409	-	TSC_hg19_v1_chr7_-_158622198 AB033054	234230	-	DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034557|LOC100506585|100506585|uncharacterized LOC100506585##AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC028618|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK092008|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BC043404|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BX537845|NCAPG2|54892|non-SMC condensin II complex, subunit G2##NM_017760|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK126214|ESYT2|57488|extended synaptotagmin-like protein 2##AB033054|ESYT2|57488|extended synaptotagmin-like protein 2	0.0	
chr2	191715405	191715501	reg1009569.p2	9.969	+	TSC_hg19_v1_chr2_+_191513840 NM_005966 BC035724 AK292446	-201487	+	TSC_hg19_v1_chr2_-_191399454 NM_001142645	-315987	-	AK296987 TSC_hg19_v1_chr2_-_191399436	-316026	-	AK289747 NM_014905 TSC_hg19_v1_chr2_+_191745546	30093	+	TSC_hg19_v1_chr2_+_191745547 BC038507 AB020645 AF158555	30104	+	TSC_hg19_v1_chr2_+_191745568 AF097495 Y08264 AF327434	30131	+	NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##NM_001142645|TMEM194B|100131211|transmembrane protein 194B##AK296987|TMEM194B|100131211|transmembrane protein 194B##AK289747|GLS|2744|glutaminase##NM_014905|GLS|2744|glutaminase##BC038507|GLS|2744|glutaminase##AB020645|GLS|2744|glutaminase##AF158555|GLS|2744|glutaminase##AF097495|GLS|2744|glutaminase##Y08264|GLS|2744|glutaminase##AF327434|GLS|2744|glutaminase	0.998686	CTCF.p2:-7:0.999
chr3	153970966	153971078	reg1011984.p2	9.969	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	-131820	+	AK127282 NM_001251962	-132231	+	AF086445 NM_001101337	-768739	+	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	71238	-	DQ318360 NM_001038705	176481	-	AK310664 NM_000902 BX647134	826427	+	NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ318360|GPR149|344758|G protein-coupled receptor 149##NM_001038705|GPR149|344758|G protein-coupled receptor 149##AK310664|MME|4311|membrane metallo-endopeptidase##NM_000902|MME|4311|membrane metallo-endopeptidase##BX647134|MME|4311|membrane metallo-endopeptidase	0.998216	CTCF.p2:4:0.998
chr6	89991665	89991790	reg1011112.p1	9.969	+	AK313609 NM_002042	-64232	-	TSC_hg19_v1_chr6_+_89855838 BC035036 NM_001010853 AK302464 BC045583	-135846	+	AF449428 AB527997 CU692392 TSC_hg19_v1_chr6_-_89827756 AK314008 BC021715 NM_080743	-164025	-	BC130352 BC130354 M86868 NM_002043	33224	-	AB464335 DQ895144 EU176317 AF161502 U93243 TSC_hg19_v1_chr6_-_90062340	70589	-	AJ245898 TSC_hg19_v1_chr6_-_90062433 AF151834	70666	-	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1##NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1##BC035036|PM20D2|135293|peptidase M20 domain containing 2##NM_001010853|PM20D2|135293|peptidase M20 domain containing 2##AK302464|PM20D2|135293|peptidase M20 domain containing 2##BC045583|PM20D2|135293|peptidase M20 domain containing 2##AF449428|SRSF12|135295|serine/arginine-rich splicing factor 12##AK314008|SRSF12|135295|serine/arginine-rich splicing factor 12##BC021715|SRSF12|135295|serine/arginine-rich splicing factor 12##NM_080743|SRSF12|135295|serine/arginine-rich splicing factor 12##BC130352|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##BC130354|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##M86868|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##NM_002043|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##DQ895144|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##EU176317|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AF161502|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##U93243|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AJ245898|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AF151834|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U	0.221856	CTCF.p2:-10:0.222
chr8	92003485	92003623	reg1012251.p1	9.969	+	TSC_hg19_v1_chr8_-_91997476 NM_001190972	-6092	-	AF414126 TSC_hg19_v1_chr8_+_91803956 NM_022351 AK095533 BC068448 AY224210	-199609	+	TSC_hg19_v1_chr8_-_91657970 AY147881 NM_001008495 NM_001146273	-345539	-	TSC_hg19_v1_chr8_-_92053091 AX775961 BC033892 AK313783 NM_018710	49568	-	TSC_hg19_v1_chr8_-_92082268 BC067244 BC105990 BC030623	78785	-	NM_016023 TSC_hg19_v1_chr8_+_92082548 BX647772 AK293843 BC029760 AK310823 AK291646 AF151836	78960	+	NM_001190972|LOC100127983|100127983|uncharacterized LOC100127983##AF414126|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##NM_022351|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AK095533|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##BC068448|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AY224210|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AY147881|TMEM64|169200|transmembrane protein 64##NM_001008495|TMEM64|169200|transmembrane protein 64##NM_001146273|TMEM64|169200|transmembrane protein 64##AX775961|TMEM55A|55529|transmembrane protein 55A##BC033892|TMEM55A|55529|transmembrane protein 55A##AK313783|TMEM55A|55529|transmembrane protein 55A##NM_018710|TMEM55A|55529|transmembrane protein 55A##NM_016023|OTUD6B|51633|OTU domain containing 6B##BX647772|OTUD6B|51633|OTU domain containing 6B##AK293843|OTUD6B|51633|OTU domain containing 6B##BC029760|OTUD6B|51633|OTU domain containing 6B##AK310823|OTUD6B|51633|OTU domain containing 6B##AK291646|OTUD6B|51633|OTU domain containing 6B##AF151836|OTUD6B|51633|OTU domain containing 6B	0.993867	CTCF.p2:-16:0.994
chr1	98519802	98519927	reg1011704.p1	9.968	+	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	-133258	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	-133305	-	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	-133375	-	TSC_hg19_v1_chr1_+_99127278 NM_015976 NM_152238 AK025031 AK223229 AL049989 AF121857 AK298211 BC018105 BC010349	607444	+	BC040174 AK295688 BC140086 BC143086 AY634620 BC136350 BC144000 AY574039 FJ472844 NM_001010861 NM_001037317	950448	-	AF541281 NM_001166252 NM_014839 AB007924 AK056665 AY304518 AB384482 BC042963 TSC_hg19_v1_chr1_+_99730047 AK291369 AK297417	1210086	+	NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##NM_015976|SNX7|51375|sorting nexin 7##NM_152238|SNX7|51375|sorting nexin 7##AK025031|SNX7|51375|sorting nexin 7##AK223229|SNX7|51375|sorting nexin 7##AL049989|SNX7|51375|sorting nexin 7##AF121857|SNX7|51375|sorting nexin 7##AK298211|SNX7|51375|sorting nexin 7##BC018105|SNX7|51375|sorting nexin 7##BC010349|SNX7|51375|sorting nexin 7##BC040174|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AK295688|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC140086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC143086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY634620|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC136350|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC144000|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY574039|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##FJ472844|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001010861|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001037317|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	0.988311	CTCF.p2:11:0.988
chr14	56198744	56198870	reg1011807.p1	9.967	+	L25616 TSC_hg19_v1_chr14_+_56078737 AB527439	-120058	+	TSC_hg19_v1_chr14_+_56046963 NM_001079521 NM_001079522 NM_004986 NM_182926 BC066337 D13629 AK302797 BC050555 BC058736 Z22551 AY264265 BC112337	-151705	+	BX248296 TSC_hg19_v1_chr14_-_56046835 AK124927	-151991	-	TSC_hg19_v1_chr14_+_56585131 BC009476 NM_021255 AK315727	386187	+	TSC_hg19_v1_chr14_+_56585163 AF302502	386367	+	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	847738	+	L25616|KTN1|3895|kinectin 1 (kinesin receptor)##NM_001079521|KTN1|3895|kinectin 1 (kinesin receptor)##NM_001079522|KTN1|3895|kinectin 1 (kinesin receptor)##NM_004986|KTN1|3895|kinectin 1 (kinesin receptor)##NM_182926|KTN1|3895|kinectin 1 (kinesin receptor)##BC066337|KTN1|3895|kinectin 1 (kinesin receptor)##D13629|KTN1|3895|kinectin 1 (kinesin receptor)##AK302797|KTN1|3895|kinectin 1 (kinesin receptor)##BC050555|KTN1|3895|kinectin 1 (kinesin receptor)##BC058736|KTN1|3895|kinectin 1 (kinesin receptor)##Z22551|KTN1|3895|kinectin 1 (kinesin receptor)##AY264265|KTN1|3895|kinectin 1 (kinesin receptor)##BC112337|KTN1|3895|kinectin 1 (kinesin receptor)##BX248296|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##AK124927|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##BC009476|PELI2|57161|pellino homolog 2 (Drosophila)##NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)##AK315727|PELI2|57161|pellino homolog 2 (Drosophila)##AF302502|PELI2|57161|pellino homolog 2 (Drosophila)##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101	0.92402	CTCF.p2:-5:0.924
chr2	180275744	180275883	reg1011207.p2	9.967	+	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	-146408	-	AL832777 NM_173648	-361028	-	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-603710	-	AK057999 NM_001113398	151501	-	AK096822 NM_001113397	334955	-	TSC_hg19_v1_chr2_-_180726048 AK131432 BC033042	450234	-	AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B##AK096822|ZNF385B|151126|zinc finger protein 385B##NM_001113397|ZNF385B|151126|zinc finger protein 385B##AK131432|ZNF385B|151126|zinc finger protein 385B##BC033042|ZNF385B|151126|zinc finger protein 385B	0.997703	CTCF.p2:-9:0.998
chr7	105070312	105070412	reg1011904.p1	9.967	+	TSC_hg19_v1_chr7_-_105029346 NM_182692	-41020	-	TSC_hg19_v1_chr7_-_105029265 AB489157	-41097	-	BC035214 TSC_hg19_v1_chr7_-_104909496 U88666 NM_182691	-160879	-	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	92299	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	102284	+	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	151573	-	NM_182692|SRPK2|6733|SRSF protein kinase 2##BC035214|SRPK2|6733|SRSF protein kinase 2##U88666|SRPK2|6733|SRSF protein kinase 2##NM_182691|SRPK2|6733|SRSF protein kinase 2##BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10	0.969796	CTCF.p2:-12:0.970
chr2	233190860	233190980	reg1012866.p1	9.966	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-364560	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	-399887	-	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-539804	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	52463	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	80656	+	AK313163 NM_001631 BC132678 M31008 M15694	129950	+	AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal	0.999292	CTCF.p2:-4:0.999
chr3	186539340	186539465	reg1011517.p1	9.966	+	NM_181573	-14919	-	BC017452 BC024022 TSC_hg19_v1_chr3_-_186524253 AK297282 NM_002916	-15139	-	NM_001967 TSC_hg19_v1_chr3_+_186501365 AK130087 AK225646 BC012547 BC015842 BC048105 AL117412 BC013708 BC006469 D30655 S79942 AF208852 AB590233 CU677469 CU680354 CU690550 DQ891738 DQ894914 BT009860	-38023	+	NM_001177800 NM_004797 TSC_hg19_v1_chr3_+_186560467 AL832470	21064	+	BC096308 BC096309 BC096310 BC096311 TSC_hg19_v1_chr3_+_186560498 AK291525 AK312868 AX767959 D45371 BC054496	21097	+	TSC_hg19_v1_chr3_+_186648314 NM_173216 NM_173217	108907	+	NM_181573|RFC4|5984|replication factor C (activator 1) 4, 37kDa##BC017452|RFC4|5984|replication factor C (activator 1) 4, 37kDa##BC024022|RFC4|5984|replication factor C (activator 1) 4, 37kDa##AK297282|RFC4|5984|replication factor C (activator 1) 4, 37kDa##NM_002916|RFC4|5984|replication factor C (activator 1) 4, 37kDa##NM_001967|EIF4A2|1974|eukaryotic translation initiation factor 4A2##AK130087|EIF4A2|1974|eukaryotic translation initiation factor 4A2##AK225646|EIF4A2|1974|eukaryotic translation initiation factor 4A2##BC012547|EIF4A2|1974|eukaryotic translation initiation factor 4A2##BC015842|EIF4A2|1974|eukaryotic translation initiation factor 4A2##BC048105|EIF4A2|1974|eukaryotic translation initiation factor 4A2##AL117412|EIF4A2|1974|eukaryotic translation initiation factor 4A2##BC013708|EIF4A2|1974|eukaryotic translation initiation factor 4A2##BC006469|EIF4A2|1974|eukaryotic translation initiation factor 4A2##D30655|EIF4A2|1974|eukaryotic translation initiation factor 4A2##S79942|EIF4A2|1974|eukaryotic translation initiation factor 4A2##AF208852|EIF4A2|1974|eukaryotic translation initiation factor 4A2##DQ891738|EIF4A2|1974|eukaryotic translation initiation factor 4A2##DQ894914|EIF4A2|1974|eukaryotic translation initiation factor 4A2##BT009860|EIF4A2|1974|eukaryotic translation initiation factor 4A2##NM_001177800|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##NM_004797|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AL832470|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096308|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096309|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096310|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096311|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AK291525|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AK312868|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AX767959|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##D45371|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC054496|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##NM_173216|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_173217|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	0.995781	CTCF.p2:22:0.996
chr6	118297359	118297463	reg1009925.p1	9.966	+	BC028615 NM_001029858 BC114925	-68721	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-300745	+	BC110325 TSC_hg19_v1_chr6_+_117996661 BC063794	-300750	+	NM_002667 M63603 AK311799 BC005269	572054	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	675625	-	BC110835 BC064835 NM_001178035	733822	-	BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC110325|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC063794|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like	0.969087	CTCF.p2:-15:0.969
chr5	128462478	128462591	reg1012459.p2	9.965	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-32109	+	TSC_hg19_v1_chr5_+_128301169 BX537383 NM_014031 NM_001017372 AK313456 AL833117	-161337	+	TSC_hg19_v1_chr5_+_128300789 BC041945	-161731	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	333519	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	777953	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	2038397	-	AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##BX537383|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_014031|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_001017372|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AK313456|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AL833117|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##BC041945|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1	0.737173	CTCF.p2:6:0.737
chr7	107365704	107365825	reg1011681.p2	9.965	+	BC052342 BC037315 BC047092 BC022493 TSC_hg19_v1_chr7_-_107302278	-63548	-	AF030880 NM_000441	-64685	+	NM_001008405 BT006981 CU678973	-144554	+	AK293352 NM_024814	18514	+	TSC_hg19_v1_chr7_+_107384589 AK026762 AK307992 BC130529 BC130531 BC144176	18817	+	L02785 BC025671 TSC_hg19_v1_chr7_-_107443671 BX640837 NM_000111	77890	-	BC052342|LOC286002|286002|uncharacterized LOC286002##BC037315|LOC286002|286002|uncharacterized LOC286002##BC047092|LOC286002|286002|uncharacterized LOC286002##BC022493|LOC286002|286002|uncharacterized LOC286002##AF030880|SLC26A4|5172|solute carrier family 26, member 4##NM_000441|SLC26A4|5172|solute carrier family 26, member 4##NM_001008405|BCAP29|55973|B-cell receptor-associated protein 29##BT006981|BCAP29|55973|B-cell receptor-associated protein 29##AK293352|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##NM_024814|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK026762|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK307992|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC130529|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC130531|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC144176|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##L02785|SLC26A3|1811|solute carrier family 26, member 3##BC025671|SLC26A3|1811|solute carrier family 26, member 3##BX640837|SLC26A3|1811|solute carrier family 26, member 3##NM_000111|SLC26A3|1811|solute carrier family 26, member 3	0.999771	CTCF.p2:6:1.000
chr7	128482153	128482292	reg1010190.p1	9.965	+	AB371585 AF146692 NM_001127487 NM_001458	-11750	+	NM_022742 BC150331 AB058696 BC152408	-50149	+	TSC_hg19_v1_chr7_+_128431491 NM_001201372 AK124447	-50700	+	NM_001198909 NM_004231 BC107854 TSC_hg19_v1_chr7_+_128502909 BC104230 BC104231 D49400 AK312214	20668	+	TSC_hg19_v1_chr7_+_128502927 CR456896	20720	+	NM_001195150	24241	+	AB371585|FLNC|2318|filamin C, gamma##AF146692|FLNC|2318|filamin C, gamma##NM_001127487|FLNC|2318|filamin C, gamma##NM_001458|FLNC|2318|filamin C, gamma##NM_022742|CCDC136|64753|coiled-coil domain containing 136##BC150331|CCDC136|64753|coiled-coil domain containing 136##AB058696|CCDC136|64753|coiled-coil domain containing 136##BC152408|CCDC136|64753|coiled-coil domain containing 136##NM_001201372|CCDC136|64753|coiled-coil domain containing 136##AK124447|CCDC136|64753|coiled-coil domain containing 136##NM_001198909|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##NM_004231|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC107854|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC104230|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC104231|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##D49400|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##AK312214|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##CR456896|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##NM_001195150|LOC100130705|100130705|uncharacterized LOC100130705	0.999778	CTCF.p2:8:1.000
chr8	141109351	141109463	reg1011349.p2	9.965	+	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	-394125	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	-1183163	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-1600301	-	AB067469 TSC_hg19_v1_chr8_-_141467841	358418	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	358451	-	AK128755 NM_031466	359270	-	AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9##AK128755|TRAPPC9|83696|trafficking protein particle complex 9##NM_031466|TRAPPC9|83696|trafficking protein particle complex 9	0.0	
chr10	69968330	69968441	reg1011889.p1	9.964	+	NM_032578 TSC_hg19_v1_chr10_+_69869249 AK027343 BX647637 AL832002 AL834247 BC142609 BC144333 BC144334	-99047	+	TSC_hg19_v1_chr10_-_69835055 NM_015601 NM_022079	-133278	-	BC039600 TSC_hg19_v1_chr10_-_69835041 AK026808 AY221963 AY650032 AY650033 AY650034	-133359	-	BC032621 NM_145178 AB593108 AB593109	23476	-	AK312275 AB528615 TSC_hg19_v1_chr10_-_70066624 AK092826 AX747753	98229	-	NM_012207 NM_021644 AK223441 AK291547 TSC_hg19_v1_chr10_+_70091820 BC039824 AX810704 AK295316 AF132361	123437	+	NM_032578|MYPN|84665|myopalladin##AK027343|MYPN|84665|myopalladin##BX647637|MYPN|84665|myopalladin##AL832002|MYPN|84665|myopalladin##AL834247|MYPN|84665|myopalladin##BC142609|MYPN|84665|myopalladin##BC144333|MYPN|84665|myopalladin##BC144334|MYPN|84665|myopalladin##NM_015601|HERC4|26091|hect domain and RLD 4##NM_022079|HERC4|26091|hect domain and RLD 4##BC039600|HERC4|26091|hect domain and RLD 4##AK026808|HERC4|26091|hect domain and RLD 4##AY221963|HERC4|26091|hect domain and RLD 4##AY650032|HERC4|26091|hect domain and RLD 4##AY650033|HERC4|26091|hect domain and RLD 4##AY650034|HERC4|26091|hect domain and RLD 4##BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)##NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)##AB593108|ATOH7|220202|atonal homolog 7 (Drosophila)##AB593109|ATOH7|220202|atonal homolog 7 (Drosophila)##AK312275|PBLD|64081|phenazine biosynthesis-like protein domain containing##AK092826|PBLD|64081|phenazine biosynthesis-like protein domain containing##NM_012207|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##NM_021644|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK223441|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK291547|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##BC039824|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK295316|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AF132361|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)	0.917112	CTCF.p2:1:0.917
chr14	89643931	89644042	reg1013455.p1	9.964	+	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-352993	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-384776	-	NM_207662 BC027607 AF474376	-583233	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	234790	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	239424	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	441609	-	AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3	0.998213	CTCF.p2:-32:0.998
chrX	149000872	149001015	reg1013428.p1	9.964	+	AK292272 AK313321 NM_001080790 BC002351 NM_005365	-137348	+	NM_001164415 NM_016153	-145218	+	NM_005366 AY747607 BC004479	-207174	+	AK313943 NM_001166400 NM_001166401 NM_005364 BC002455 BC012744	9027	+	L43575 TSC_hg19_v1_chrX_-_149106661 U66042 NM_001013845	105739	-	TSC_hg19_v1_chrX_+_149529838 AK302612	528890	+	AK292272|MAGEA9|4108|melanoma antigen family A, 9##AK313321|MAGEA9|4108|melanoma antigen family A, 9##NM_001080790|MAGEA9B|728269|melanoma antigen family A, 9B##BC002351|MAGEA9|4108|melanoma antigen family A, 9##NM_005365|MAGEA9|4108|melanoma antigen family A, 9##NM_001164415|HSFX2|100130086|heat shock transcription factor family, X linked 2##NM_016153|HSFX1|100506164|heat shock transcription factor family, X linked 1##NM_005366|MAGEA11|4110|melanoma antigen family A, 11##AY747607|MAGEA11|4110|melanoma antigen family A, 11##BC004479|MAGEA11|4110|melanoma antigen family A, 11##AK313943|MAGEA8|4107|melanoma antigen family A, 8##NM_001166400|MAGEA8|4107|melanoma antigen family A, 8##NM_001166401|MAGEA8|4107|melanoma antigen family A, 8##NM_005364|MAGEA8|4107|melanoma antigen family A, 8##BC002455|MAGEA8|4107|melanoma antigen family A, 8##BC012744|MAGEA8|4107|melanoma antigen family A, 8##L43575|CXorf40B|541578|chromosome X open reading frame 40B##U66042|CXorf40B|541578|chromosome X open reading frame 40B##NM_001013845|CXorf40B|541578|chromosome X open reading frame 40B##AK302612|MAMLD1|10046|mastermind-like domain containing 1	0.865239	CTCF.p2:-9:0.865
chr12	111967350	111967479	reg1013087.p1	9.963	+	AK126309 TSC_hg19_v1_chr12_-_111893987	-73491	-	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	-123665	+	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	-160504	-	TSC_hg19_v1_chr12_-_112036257 AK095017	68861	-	TSC_hg19_v1_chr12_-_112036908 AK307803	69499	-	TSC_hg19_v1_chr12_-_112037088 Y08262	69643	-	AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##AK095017|ATXN2|6311|ataxin 2##AK307803|ATXN2|6311|ataxin 2##Y08262|ATXN2|6311|ataxin 2	0.991357	CTCF.p2:11:0.991
chr15	74166391	74166507	reg1011544.p2	9.963	+	BC033516 NM_153356 AB449907	-441	+	BC111368 NM_001039614	-122634	-	TSC_hg19_v1_chr15_+_73976784 AK296358 AK291721 AK309728	-189664	+	TSC_hg19_v1_chr15_+_74218789 NM_005576	52340	+	TSC_hg19_v1_chr15_+_74218802 BC068542 AK303982 AK314222	52352	+	TSC_hg19_v1_chr15_+_74218813 BC015090 L21186	52366	+	BC033516|TBC1D21|161514|TBC1 domain family, member 21##NM_153356|TBC1D21|161514|TBC1 domain family, member 21##AB449907|TBC1D21|161514|TBC1 domain family, member 21##BC111368|C15orf59|388135|chromosome 15 open reading frame 59##NM_001039614|C15orf59|388135|chromosome 15 open reading frame 59##AK296358|CD276|80381|CD276 molecule##AK291721|CD276|80381|CD276 molecule##AK309728|CD276|80381|CD276 molecule##NM_005576|LOXL1|4016|lysyl oxidase-like 1##BC068542|LOXL1|4016|lysyl oxidase-like 1##AK303982|LOXL1|4016|lysyl oxidase-like 1##AK314222|LOXL1|4016|lysyl oxidase-like 1##BC015090|LOXL1|4016|lysyl oxidase-like 1##L21186|LOXL1|4016|lysyl oxidase-like 1	0.999901	CTCF.p2:-10:0.983
chr5	86176742	86176862	reg1011526.p2	9.963	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	-262985	+	TSC_hg19_v1_chr5_+_85913757 AK026505	-263044	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-2496138	-	TSC_hg19_v1_chr5_+_86563706 CR749722	386883	+	TSC_hg19_v1_chr5_+_86563831 BC131816	387024	+	TSC_hg19_v1_chr5_+_86564085 AB209106 NM_002890 BC033015	387264	+	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.0	
chr7	108137681	108137814	reg1012928.p1	9.962	+	TSC_hg19_v1_chr7_-_108096830 BC114570 BC115736 AB002341 BX538010 AK299870 BC098401 NM_001193582 NM_001193583 NM_001193584 NM_005010	-40818	-	AJ001057 AB385311 NM_001037132	-257195	-	BC142619 BC140804 BC144591 AF028816 AK300385 NM_007356	-366955	-	TSC_hg19_v1_chr7_-_108142934 BC005203 AK002115	5225	-	AL834147 TSC_hg19_v1_chr7_-_108166546	28786	-	TSC_hg19_v1_chr7_-_108166573 AF263613 AF263947	28819	-	BC114570|NRCAM|4897|neuronal cell adhesion molecule##BC115736|NRCAM|4897|neuronal cell adhesion molecule##AB002341|NRCAM|4897|neuronal cell adhesion molecule##BX538010|NRCAM|4897|neuronal cell adhesion molecule##AK299870|NRCAM|4897|neuronal cell adhesion molecule##BC098401|NRCAM|4897|neuronal cell adhesion molecule##NM_001193582|NRCAM|4897|neuronal cell adhesion molecule##NM_001193583|NRCAM|4897|neuronal cell adhesion molecule##NM_001193584|NRCAM|4897|neuronal cell adhesion molecule##NM_005010|NRCAM|4897|neuronal cell adhesion molecule##AJ001057|NRCAM|4897|neuronal cell adhesion molecule##NM_001037132|NRCAM|4897|neuronal cell adhesion molecule##BC142619|LAMB4|22798|laminin, beta 4##BC140804|LAMB4|22798|laminin, beta 4##BC144591|LAMB4|22798|laminin, beta 4##AF028816|LAMB4|22798|laminin, beta 4##AK300385|LAMB4|22798|laminin, beta 4##NM_007356|LAMB4|22798|laminin, beta 4##BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8##AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8##AL834147|PNPLA8|50640|patatin-like phospholipase domain containing 8##AF263613|PNPLA8|50640|patatin-like phospholipase domain containing 8##AF263947|PNPLA8|50640|patatin-like phospholipase domain containing 8	0.918587	CTCF.p2:5:0.919
chr5	135585480	135585629	reg1011634.p1	9.961	+	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-116970	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-117025	+	TSC_hg19_v1_chr5_+_135364731 AB590111 DQ892178 EU176690 CU678832 BT009820	-220820	+	NM_001167576 NM_001167577 NM_020389	115609	-	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	1248687	-	TSC_hg19_v1_chr5_-_136834420 AK094489	1248873	-	AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ892178|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##EU176690|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BT009820|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.975914	CTCF.p2:-5:0.976
chr13	108974695	108974842	reg1014040.p1	9.960	+	DQ857728 TSC_hg19_v1_chr13_+_108955871	-18951	+	TSC_hg19_v1_chr13_+_108922564 AY129227 AY129228	-52124	+	AY129226 TSC_hg19_v1_chr13_+_108922483	-52283	+	AB020672 BC146791 NM_015011 AL834447	273746	+	AB290159 AK127806 NM_001198950	306801	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	1464140	-	AY129227|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AY129228|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AY129226|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2	0.994962	CTCF.p2:-13:0.995
chr14	88411476	88411608	reg1011861.p1	9.960	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-2411957	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-2415001	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-2415069	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	47921	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	48017	-	NM_001201402	48466	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	1.871587	CTCF.p2:-21:0.992	CTCF.p2:-84:0.879
chr17	27292739	27292839	reg1011293.p1	9.960	+	TSC_hg19_v1_chr17_-_27278483 AY030283 NM_001033561 NM_020889	-14293	-	BC110882 TSC_hg19_v1_chr17_-_27278336	-14459	-	TSC_hg19_v1_chr17_-_27240983 AK024290	-51776	-	AB527210 TSC_hg19_v1_chr17_-_27333044 AK125377 AK223620 AY038048 NM_001098635 NM_178860 AF502129 AF502130	40236	-	BC008960 NM_016518	77128	+	AK022773 BC027622 AK027498 TSC_hg19_v1_chr17_+_27370199 AF134593 AF136970 CU679199 DQ896538 EU176447 CR457155	77410	+	AY030283|PHF12|57649|PHD finger protein 12##NM_001033561|PHF12|57649|PHD finger protein 12##NM_020889|PHF12|57649|PHD finger protein 12##BC110882|PHF12|57649|PHD finger protein 12##AK024290|PHF12|57649|PHD finger protein 12##AK125377|SEZ6|124925|seizure related 6 homolog (mouse)##AK223620|SEZ6|124925|seizure related 6 homolog (mouse)##AY038048|SEZ6|124925|seizure related 6 homolog (mouse)##NM_001098635|SEZ6|124925|seizure related 6 homolog (mouse)##NM_178860|SEZ6|124925|seizure related 6 homolog (mouse)##AF502129|SEZ6|124925|seizure related 6 homolog (mouse)##AF502130|SEZ6|124925|seizure related 6 homolog (mouse)##BC008960|PIPOX|51268|pipecolic acid oxidase##NM_016518|PIPOX|51268|pipecolic acid oxidase##AK022773|PIPOX|51268|pipecolic acid oxidase##BC027622|PIPOX|51268|pipecolic acid oxidase##AK027498|PIPOX|51268|pipecolic acid oxidase##AF134593|PIPOX|51268|pipecolic acid oxidase##AF136970|PIPOX|51268|pipecolic acid oxidase##DQ896538|PIPOX|51268|pipecolic acid oxidase##EU176447|PIPOX|51268|pipecolic acid oxidase##CR457155|PIPOX|51268|pipecolic acid oxidase	0.438881	CTCF.p2:9:0.439
chr3	184072206	184072333	reg1012385.p2	9.959	+	BC026221 TSC_hg19_v1_chr3_+_184056421	-15907	+	NM_144635 AK126656 TSC_hg19_v1_chr3_+_184055387	-16935	+	TSC_hg19_v1_chr3_+_184053724 NM_001171093 BC037299	-18526	+	AF026004 TSC_hg19_v1_chr3_-_184079266 AK302389 BC072004 AK298952 AK302759 NM_001171087 NM_001171088 NM_001171089 NM_004366	7059	-	TSC_hg19_v1_chr3_+_184081196 NM_006232 Z49199 BC000739 AB464044 EU446997	8960	+	BC130322 BC136338 BC143982 L33410 NM_000460 NM_001177597 NM_001177598 TSC_hg19_v1_chr3_-_184095936	23669	-	BC026221|FAM131A|131408|family with sequence similarity 131, member A##NM_144635|FAM131A|131408|family with sequence similarity 131, member A##NM_001171093|FAM131A|131408|family with sequence similarity 131, member A##BC037299|FAM131A|131408|family with sequence similarity 131, member A##AF026004|CLCN2|1181|chloride channel 2##AK302389|CLCN2|1181|chloride channel 2##BC072004|CLCN2|1181|chloride channel 2##AK298952|CLCN2|1181|chloride channel 2##AK302759|CLCN2|1181|chloride channel 2##NM_001171087|CLCN2|1181|chloride channel 2##NM_001171088|CLCN2|1181|chloride channel 2##NM_001171089|CLCN2|1181|chloride channel 2##NM_004366|CLCN2|1181|chloride channel 2##NM_006232|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##Z49199|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##BC000739|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##EU446997|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##BC130322|THPO|7066|thrombopoietin##BC136338|THPO|7066|thrombopoietin##BC143982|THPO|7066|thrombopoietin##L33410|THPO|7066|thrombopoietin##NM_000460|THPO|7066|thrombopoietin##NM_001177597|THPO|7066|thrombopoietin##NM_001177598|THPO|7066|thrombopoietin	0.999889	CTCF.p2:-14:1.000
chr9	19457522	19457657	reg1012576.p1	9.959	+	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-48586	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-77362	-	TSC_hg19_v1_chr9_-_19378815 BC035447	-78723	-	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	329362	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	1164859	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	1164907	-	AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##BC035447|RPS6|6194|ribosomal protein S6##BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	0.981048	CTCF.p2:18:0.981
chr19	31275880	31276006	reg1013671.p1	9.958	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	-412563	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	-842661	+	BC026184 NM_001252641	-861393	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	564404	-	FJ211597 NM_001205273	807243	+	TSC_hg19_v1_chr19_+_32836524 NM_001136156 NM_014910 AK292526 AB029007 BX640881 BC136417 AL713775	1560619	+	BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5##NM_001136156|ZNF507|22847|zinc finger protein 507##NM_014910|ZNF507|22847|zinc finger protein 507##AK292526|ZNF507|22847|zinc finger protein 507##AB029007|ZNF507|22847|zinc finger protein 507##BX640881|ZNF507|22847|zinc finger protein 507##BC136417|ZNF507|22847|zinc finger protein 507##AL713775|ZNF507|22847|zinc finger protein 507	0.999175	CTCF.p2:1:0.999
chr2	113956778	113956919	reg1013620.p1	9.958	+	TSC_hg19_v1_chr2_+_113931576 BC035307 BC073151	-25267	+	AK290045 TSC_hg19_v1_chr2_+_113931556 AB208798 NM_012455	-25294	+	TSC_hg19_v1_chr2_+_113885174 AK290926 X52015 X53296 AB529162	-71644	+	TSC_hg19_v1_chr2_+_113993123 AK056052 AK307781 BX537688 AK056355 AK130275	36422	+	S77904 S77905 S77906 X69699 BC001060 AK292191 AK309154 AK225538 NM_003466 NM_013952 NM_013953 NM_013992 TSC_hg19_v1_chr2_-_114036499	79645	-	AK290072 NM_172003 AK303653 AY343910 TSC_hg19_v1_chr2_+_114195398 AY320414 BC120991 BC120992 AK225251 AF452722	238491	+	BC035307|PSD4|23550|pleckstrin and Sec7 domain containing 4##BC073151|PSD4|23550|pleckstrin and Sec7 domain containing 4##AK290045|PSD4|23550|pleckstrin and Sec7 domain containing 4##AB208798|PSD4|23550|pleckstrin and Sec7 domain containing 4##NM_012455|PSD4|23550|pleckstrin and Sec7 domain containing 4##AK290926|IL1RN|3557|interleukin 1 receptor antagonist##X52015|IL1RN|3557|interleukin 1 receptor antagonist##X53296|IL1RN|3557|interleukin 1 receptor antagonist##AK056052|LOC654433|654433|uncharacterized LOC654433##AK307781|LOC654433|654433|uncharacterized LOC654433##BX537688|LOC654433|654433|uncharacterized LOC654433##AK056355|LOC654433|654433|uncharacterized LOC654433##AK130275|LOC654433|654433|uncharacterized LOC654433##S77904|PAX8|7849|paired box 8##S77905|PAX8|7849|paired box 8##S77906|PAX8|7849|paired box 8##X69699|PAX8|7849|paired box 8##BC001060|PAX8|7849|paired box 8##AK292191|PAX8|7849|paired box 8##AK309154|PAX8|7849|paired box 8##AK225538|PAX8|7849|paired box 8##NM_003466|PAX8|7849|paired box 8##NM_013952|PAX8|7849|paired box 8##NM_013953|PAX8|7849|paired box 8##NM_013992|PAX8|7849|paired box 8##AK290072|CBWD2|150472|COBW domain containing 2##NM_172003|CBWD2|150472|COBW domain containing 2##AK303653|CBWD2|150472|COBW domain containing 2##AY343910|CBWD2|150472|COBW domain containing 2##AY320414|CBWD1|55871|COBW domain containing 1##BC120991|CBWD2|150472|COBW domain containing 2##BC120992|CBWD2|150472|COBW domain containing 2##AK225251|CBWD2|150472|COBW domain containing 2##AF452722|CBWD2|150472|COBW domain containing 2	0.986686	CTCF.p2:7:0.987
chr5	58802264	58802365	reg1008814.p1	9.958	+	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	-149571	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	-230384	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	-466936	-	U50159 NM_006203 L20970	79985	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	262034	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	262141	-	AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.479979	CTCF.p2:-5:0.480
chr12	7830084	7830194	reg1009648.p2	9.957	+	U72890 L25877 U72891 BC101405 BC101404 BC101972 BC096158 BC096159 BC096160 BC096161 BC101973 BC144708 NM_001644	-11655	-	DQ058615 TSC_hg19_v1_chr12_-_7656374 BC051281 AK226017 Z22968 Z22969 Z22970 Z22971 NM_004244 NM_203416	-173789	-	GQ397482 AY358856 AK303372 AF264014 NM_174941 BC104962 BC104964	-233402	-	CU689052 DQ892661 DQ895901 AF110641 AF263538 NM_020634 BC030959 AY358875	18217	-	AY317075 NM_199286 BC125145	33934	+	AF293615 NM_130441 NM_203503	71929	-	U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##DQ058615|CD163|9332|CD163 molecule##BC051281|CD163|9332|CD163 molecule##AK226017|CD163|9332|CD163 molecule##Z22968|CD163|9332|CD163 molecule##Z22969|CD163|9332|CD163 molecule##Z22970|CD163|9332|CD163 molecule##Z22971|CD163|9332|CD163 molecule##NM_004244|CD163|9332|CD163 molecule##NM_203416|CD163|9332|CD163 molecule##GQ397482|CD163L1|283316|CD163 molecule-like 1##AK303372|CD163L1|283316|CD163 molecule-like 1##AF264014|CD163L1|283316|CD163 molecule-like 1##NM_174941|CD163L1|283316|CD163 molecule-like 1##BC104962|CD163L1|283316|CD163 molecule-like 1##BC104964|CD163L1|283316|CD163 molecule-like 1##DQ892661|GDF3|9573|growth differentiation factor 3##DQ895901|GDF3|9573|growth differentiation factor 3##AF110641|GDF3|9573|growth differentiation factor 3##AF263538|GDF3|9573|growth differentiation factor 3##NM_020634|GDF3|9573|growth differentiation factor 3##BC030959|GDF3|9573|growth differentiation factor 3##AY358875|GDF3|9573|growth differentiation factor 3##AY317075|DPPA3|359787|developmental pluripotency associated 3##NM_199286|DPPA3|359787|developmental pluripotency associated 3##BC125145|STELLAR|400206|developmental pluripotency associated 3 pseudogene##AF293615|CLEC4C|170482|C-type lectin domain family 4, member C##NM_130441|CLEC4C|170482|C-type lectin domain family 4, member C##NM_203503|CLEC4C|170482|C-type lectin domain family 4, member C	0.929474	CTCF.p2:-16:0.929
chr14	45272599	45272721	reg1010165.p2	9.957	+	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	-296185	-	NM_152447 AK096627	-3195893	+	BC053537 BC068566 BC030611 NM_203301	-5370999	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	93838	+	BC121009 BC121010 TSC_hg19_v1_chr14_-_45431102	158436	-	TSC_hg19_v1_chr14_-_45431142 AK289855 NM_017658	158490	-	AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28##BC121009|KLHL28|54813|kelch-like 28 (Drosophila)##BC121010|KLHL28|54813|kelch-like 28 (Drosophila)##AK289855|KLHL28|54813|kelch-like 28 (Drosophila)##NM_017658|KLHL28|54813|kelch-like 28 (Drosophila)	0.589292	CTCF.p2:23:0.589
chr22	43058092	43058215	reg1010989.p1	9.957	+	TSC_hg19_v1_chr22_-_43045399 NM_000398	-12750	-	TSC_hg19_v1_chr22_-_43045347 AJ010116 AJ010117 AJ010118 BT009821 AB463000 CU012995 CU013283 CR456435 AF361370 Y09501 BC004821	-12821	-	TSC_hg19_v1_chr22_-_43042979 NM_001129819 NM_001171661 NM_007326	-15168	-	AK074388 TSC_hg19_v1_chr22_-_43089917 AJ245581 CU677819 AB590407 DQ891619 DQ894811	31754	-	TSC_hg19_v1_chr22_-_43116877 BC017068 GU902275 GU902276 GU902277 GU902278 GU902279 GU902280 GU902281 AK130208 NM_017436	58702	-	TSC_hg19_v1_chr22_-_43117270 AK312927	59124	-	NM_000398|CYB5R3|1727|cytochrome b5 reductase 3##AJ010116|CYB5R3|1727|cytochrome b5 reductase 3##AJ010117|CYB5R3|1727|cytochrome b5 reductase 3##AJ010118|CYB5R3|1727|cytochrome b5 reductase 3##BT009821|CYB5R3|1727|cytochrome b5 reductase 3##CU012995|CYB5R3|1727|cytochrome b5 reductase 3##CU013283|CYB5R3|1727|cytochrome b5 reductase 3##CR456435|CYB5R3|1727|cytochrome b5 reductase 3##AF361370|CYB5R3|1727|cytochrome b5 reductase 3##Y09501|CYB5R3|1727|cytochrome b5 reductase 3##BC004821|CYB5R3|1727|cytochrome b5 reductase 3##NM_001129819|CYB5R3|1727|cytochrome b5 reductase 3##NM_001171661|CYB5R3|1727|cytochrome b5 reductase 3##NM_007326|CYB5R3|1727|cytochrome b5 reductase 3##AK074388|A4GALT|53947|alpha 1,4-galactosyltransferase##AJ245581|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ891619|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ894811|A4GALT|53947|alpha 1,4-galactosyltransferase##BC017068|A4GALT|53947|alpha 1,4-galactosyltransferase##NM_017436|A4GALT|53947|alpha 1,4-galactosyltransferase##AK312927|A4GALT|53947|alpha 1,4-galactosyltransferase	0.988517	CTCF.p2:0:0.989
chr5	132888765	132888870	reg1011638.p1	9.957	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-455926	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-460414	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-482714	+	TSC_hg19_v1_chr5_-_132948202 AK055684	59382	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	59421	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	415558	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.989979	CTCF.p2:-13:0.990
chr5	94304350	94304479	reg1010066.p1	9.957	+	AK025997 TSC_hg19_v1_chr5_-_94224607	-79808	-	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	-350041	+	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	-350157	-	AY656716 AK058012 BC030005 AK057694 TSC_hg19_v1_chr5_-_94417350	112854	-	NM_001002796	113130	-	TSC_hg19_v1_chr5_-_94620306 AY656715 NM_024717	315879	-	AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1##BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1##AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1##BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1##AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_001002796|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656715|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_024717|MCTP1|79772|multiple C2 domains, transmembrane 1	0.967683	CTCF.p2:-21:0.968
chr1	222269634	222269775	reg1010168.p1	9.956	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-354218	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-354274	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-354296	-	AY358602 BC007638 BC016552 NM_024746	451730	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	493473	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	521696	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.925928	CTCF.p2:-1:0.926
chr5	78760657	78760785	reg1011586.p2	9.956	+	TSC_hg19_v1_chr5_+_78532339 AB590691	-228317	+	TSC_hg19_v1_chr5_+_78531933 NM_152405	-228830	+	NM_001713 AK298308 AK303780 AK315224 BC012616 U50929 AB590690	-353066	+	BC047438 NM_004272	48957	-	NM_001114393 NM_001114394 NM_173797 TSC_hg19_v1_chr5_+_78908290 AL833136 BC047581	147545	+	TSC_hg19_v1_chr5_+_78908296 BC026061	147594	+	NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor##NM_001713|BHMT|635|betaine--homocysteine S-methyltransferase##AK298308|BHMT|635|betaine--homocysteine S-methyltransferase##AK303780|BHMT|635|betaine--homocysteine S-methyltransferase##AK315224|BHMT|635|betaine--homocysteine S-methyltransferase##BC012616|BHMT|635|betaine--homocysteine S-methyltransferase##U50929|BHMT|635|betaine--homocysteine S-methyltransferase##BC047438|HOMER1|9456|homer homolog 1 (Drosophila)##NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)##NM_001114393|PAPD4|167153|PAP associated domain containing 4##NM_001114394|PAPD4|167153|PAP associated domain containing 4##NM_173797|PAPD4|167153|PAP associated domain containing 4##AL833136|PAPD4|167153|PAP associated domain containing 4##BC047581|PAPD4|167153|PAP associated domain containing 4##BC026061|PAPD4|167153|PAP associated domain containing 4	0.134647	
chr11	47182723	47182829	reg1010612.p2	9.955	+	TSC_hg19_v1_chr11_+_46958328 AK316318 NM_001003676 NM_001003677 NM_001003678 NM_024113 AK315639 BC001860 BC009455 AL136575 BC052291 BC013988 AK300813 AK025863 AK293609 AB528079 AM393584 AM393807 CR457351 CU679361 CU680726	-224484	+	TSC_hg19_v1_chr11_-_46940102 AB384531 AB231861 BC136667 BC136668 AB084910 NM_002334 BC110808	-242714	-	TSC_hg19_v1_chr11_-_46867841 NM_001008938 NM_014756	-314923	-	AK301785 AL834337 EU832352 EU832437 AK300347 BC036823 AK027482 TSC_hg19_v1_chr11_-_47198413 AK304541 BC030148	15623	-	TSC_hg19_v1_chr11_-_47198431 AK315992 AK098324	15657	-	NM_001242832 NM_032389	15899	-	AK316318|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003676|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003677|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003678|C11orf49|79096|chromosome 11 open reading frame 49##NM_024113|C11orf49|79096|chromosome 11 open reading frame 49##AK315639|C11orf49|79096|chromosome 11 open reading frame 49##BC001860|C11orf49|79096|chromosome 11 open reading frame 49##BC009455|C11orf49|79096|chromosome 11 open reading frame 49##AL136575|C11orf49|79096|chromosome 11 open reading frame 49##BC052291|C11orf49|79096|chromosome 11 open reading frame 49##BC013988|C11orf49|79096|chromosome 11 open reading frame 49##AK300813|C11orf49|79096|chromosome 11 open reading frame 49##AK025863|C11orf49|79096|chromosome 11 open reading frame 49##AK293609|C11orf49|79096|chromosome 11 open reading frame 49##AM393584|C11orf49|79096|chromosome 11 open reading frame 49##AM393807|C11orf49|79096|chromosome 11 open reading frame 49##CR457351|C11orf49|79096|chromosome 11 open reading frame 49##AB231861|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136667|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136668|LRP4|4038|low density lipoprotein receptor-related protein 4##AB084910|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_002334|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_001008938|CKAP5|9793|cytoskeleton associated protein 5##NM_014756|CKAP5|9793|cytoskeleton associated protein 5##AK301785|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AL834337|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832352|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832437|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300347|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC036823|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK027482|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK304541|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC030148|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK315992|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK098324|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_001242832|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_032389|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2	0.996382	CTCF.p2:-3:0.996
chr3	143494356	143494476	reg1011090.p1	9.955	+	BC067737 TSC_hg19_v1_chr3_+_142895211	-599245	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-655765	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-773986	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	72851	-	NM_173552 AK315082	196236	+	TSC_hg19_v1_chr3_+_143690915 BC037293	196574	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58	0.977887	CTCF.p2:-12:0.978
chrX	16463452	16463585	reg1012770.p1	9.955	+	NM_005314	-322095	+	TSC_hg19_v1_chrX_-_15873104 NM_003916	-590415	-	AK130075 TSC_hg19_v1_chrX_-_15872938	-590580	-	L13220 NM_004057 X65869 BC112174	204779	+	AK125332 NM_001144002	266821	-	TSC_hg19_v1_chrX_-_16730802 NM_175859 BC034986 AK125348 AF226667 AK024070 AK023549 NM_019857	267345	-	NM_005314|GRPR|2925|gastrin-releasing peptide receptor##NM_003916|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##L13220|S100G|795|S100 calcium binding protein G##NM_004057|S100G|795|S100 calcium binding protein G##X65869|S100G|795|S100 calcium binding protein G##BC112174|S100G|795|S100 calcium binding protein G##AK125332|CTPS2|56474|CTP synthase II##NM_001144002|CTPS2|56474|CTP synthase II##NM_175859|CTPS2|56474|CTP synthase II##BC034986|CTPS2|56474|CTP synthase II##AK125348|CTPS2|56474|CTP synthase II##AF226667|CTPS2|56474|CTP synthase II##AK024070|CTPS2|56474|CTP synthase II##AK023549|CTPS2|56474|CTP synthase II##NM_019857|CTPS2|56474|CTP synthase II	0.81118	CTCF.p2:-23:0.811
chr1	93064849	93064985	reg1010815.p1	9.954	+	U67369 NM_005263 TSC_hg19_v1_chr1_-_92952458	-112467	-	BC032751 TSC_hg19_v1_chr1_-_92951630 NM_001127216	-113302	-	TSC_hg19_v1_chr1_-_92949508 AK123009	-115385	-	AB449875 AB587441 AF008915 AF042345 NM_005665	193038	-	TSC_hg19_v1_chr1_+_93297596 NM_000969 AK092963 AK095815 AK314720 AB055762	232647	+	TSC_hg19_v1_chr1_+_93297612 BC109370	232688	+	U67369|GFI1|2672|growth factor independent 1 transcription repressor##NM_005263|GFI1|2672|growth factor independent 1 transcription repressor##BC032751|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127216|GFI1|2672|growth factor independent 1 transcription repressor##AK123009|GFI1|2672|growth factor independent 1 transcription repressor##AB449875|EVI5|7813|ecotropic viral integration site 5##AF008915|EVI5|7813|ecotropic viral integration site 5##NM_005665|EVI5|7813|ecotropic viral integration site 5##NM_000969|RPL5|6125|ribosomal protein L5##AK092963|RPL5|6125|ribosomal protein L5##AK095815|RPL5|6125|ribosomal protein L5##AK314720|RPL5|6125|ribosomal protein L5##AB055762|RPL5|6125|ribosomal protein L5##BC109370|RPL5|6125|ribosomal protein L5	0.335659	CTCF.p2:23:0.336
chr7	29229464	29229570	reg1011140.p1	9.954	+	AF106704 TSC_hg19_v1_chr7_-_29186093 AF282617 AK225545 BC016838 AK075433 NM_019029 NM_031311	-43404	-	AK293803 NM_014817 TSC_hg19_v1_chr7_-_28998036	-231485	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	-231588	-	TSC_hg19_v1_chr7_+_29234115 NM_004067	4606	+	U28926 AK313021 TSC_hg19_v1_chr7_+_29234428 BC112155 AK293959 AB529082 EU732759 EU732760 EU732761 EU732762 EU732763 EU732764 EU732765 EU732766	4924	+	NM_001039936	289968	+	AF106704|CPVL|54504|carboxypeptidase, vitellogenic-like##AF282617|CPVL|54504|carboxypeptidase, vitellogenic-like##AK225545|CPVL|54504|carboxypeptidase, vitellogenic-like##BC016838|CPVL|54504|carboxypeptidase, vitellogenic-like##AK075433|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_019029|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_031311|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats##NM_004067|CHN2|1124|chimerin (chimaerin) 2##U28926|CHN2|1124|chimerin (chimaerin) 2##AK313021|CHN2|1124|chimerin (chimaerin) 2##BC112155|CHN2|1124|chimerin (chimaerin) 2##AK293959|CHN2|1124|chimerin (chimaerin) 2##EU732759|CHN2|1124|chimerin (chimaerin) 2##EU732760|CHN2|1124|chimerin (chimaerin) 2##EU732761|CHN2|1124|chimerin (chimaerin) 2##EU732762|CHN2|1124|chimerin (chimaerin) 2##EU732763|CHN2|1124|chimerin (chimaerin) 2##EU732764|CHN2|1124|chimerin (chimaerin) 2##EU732765|CHN2|1124|chimerin (chimaerin) 2##EU732766|CHN2|1124|chimerin (chimaerin) 2##NM_001039936|CHN2|1124|chimerin (chimaerin) 2	0.278214	CTCF.p2:-4:0.278
chr8	30965029	30965144	reg1011788.p1	9.954	+	TSC_hg19_v1_chr8_+_30891325 AF091214	-73795	+	AF195513 AY077841 NM_001015508	-73856	-	NM_000553	-74309	+	NM_013962	532181	+	AK298132 NM_001160002 NM_001160004 NM_001160005 NM_001160007 NM_001160008 NM_004495 NM_013956 NM_013957 NM_013958 NM_013960 NM_013964 M94168 BC006492 TSC_hg19_v1_chr8_+_32405834 M94167 AF026146 AK097005 AK290730 L12261	1440703	+	AK289927 NM_013959	1539164	+	AF091214|WRN|7486|Werner syndrome, RecQ helicase-like##AF195513|PURG|29942|purine-rich element binding protein G##AY077841|PURG|29942|purine-rich element binding protein G##NM_001015508|PURG|29942|purine-rich element binding protein G##NM_000553|WRN|7486|Werner syndrome, RecQ helicase-like##NM_013962|NRG1|3084|neuregulin 1##AK298132|NRG1|3084|neuregulin 1##NM_001160002|NRG1|3084|neuregulin 1##NM_001160004|NRG1|3084|neuregulin 1##NM_001160005|NRG1|3084|neuregulin 1##NM_001160007|NRG1|3084|neuregulin 1##NM_001160008|NRG1|3084|neuregulin 1##NM_004495|NRG1|3084|neuregulin 1##NM_013956|NRG1|3084|neuregulin 1##NM_013957|NRG1|3084|neuregulin 1##NM_013958|NRG1|3084|neuregulin 1##NM_013960|NRG1|3084|neuregulin 1##NM_013964|NRG1|3084|neuregulin 1##M94168|NRG1|3084|neuregulin 1##BC006492|NRG1|3084|neuregulin 1##M94167|NRG1|3084|neuregulin 1##AF026146|NRG1|3084|neuregulin 1##AK097005|NRG1|3084|neuregulin 1##AK290730|NRG1|3084|neuregulin 1##L12261|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1	0.687706	CTCF.p2:20:0.688
chr16	86374439	86374547	reg1011243.p1	9.953	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-441707	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-541158	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-541188	+	TSC_hg19_v1_chr16_-_86542463 AK091834	167971	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	169663	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	169747	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	1.011989	CTCF.p2:8:0.999
chr5	149652241	149652347	reg1011943.p1	9.953	+	TSC_hg19_v1_chr5_+_149569812 BC093785 BC113425 BC069631 HQ258340 S80071	-82444	+	AK096607 NM_014228 TSC_hg19_v1_chr5_+_149569631 AK312309 AK308895	-82710	+	TSC_hg19_v1_chr5_+_149546340 NM_001804 AF239666 U51095 BC096249 BC096250 BC096251 BC096252 BC127122 AB463469	-105906	+	AB385410 EU832105 EU832199 AF145710 AF145711 AF091486 TSC_hg19_v1_chr5_-_149669337 BC040457 AB023185 AK308853	16993	-	TSC_hg19_v1_chr5_-_149669400 AK289776 NM_015981 NM_171825	17108	-	AY875937 BC129995 BC129996 TSC_hg19_v1_chr5_-_149682021	29684	-	BC093785|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##BC113425|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##BC069631|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##HQ258340|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##S80071|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK096607|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##NM_014228|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK312309|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK308895|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##NM_001804|CDX1|1044|caudal type homeobox 1##AF239666|CDX1|1044|caudal type homeobox 1##U51095|CDX1|1044|caudal type homeobox 1##BC096249|CDX1|1044|caudal type homeobox 1##BC096250|CDX1|1044|caudal type homeobox 1##BC096251|CDX1|1044|caudal type homeobox 1##BC096252|CDX1|1044|caudal type homeobox 1##BC127122|CDX1|1044|caudal type homeobox 1##EU832105|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##EU832199|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AF145710|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AF145711|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AF091486|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##BC040457|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AB023185|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AK308853|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AK289776|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##NM_015981|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##NM_171825|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AY875937|ARSI|340075|arylsulfatase family, member I##BC129995|ARSI|340075|arylsulfatase family, member I##BC129996|ARSI|340075|arylsulfatase family, member I	0.469206	CTCF.p2:-14:0.469
chr13	36920925	36921070	reg1012636.p1	9.952	+	TSC_hg19_v1_chr13_-_36920854 BX648004 NM_001142295	-139	-	TSC_hg19_v1_chr13_-_36920622 BC026284 NM_001142296 NM_015087	-373	-	TSC_hg19_v1_chr13_-_36920498 AK291724	-497	-	AK057764 NM_001142294	23305	-	NM_001111046 NM_001111047 TSC_hg19_v1_chr13_+_37006047 AK301897	85022	+	AK314261 NM_001111045 NM_003914	85411	+	BX648004|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_001142295|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##AK291724|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##AK057764|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_001142294|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_001111046|CCNA1|8900|cyclin A1##NM_001111047|CCNA1|8900|cyclin A1##AK301897|CCNA1|8900|cyclin A1##AK314261|CCNA1|8900|cyclin A1##NM_001111045|CCNA1|8900|cyclin A1##NM_003914|CCNA1|8900|cyclin A1	0.586242	CTCF.p2:-17:0.586
chr2	111238944	111239060	reg1011852.p1	9.951	+	BC094740 NM_001205288 NM_033514	-8351	-	TSC_hg19_v1_chr2_-_110970123 BC031315	-268881	-	AJ001815 BC032939 TSC_hg19_v1_chr2_-_110962582 BX571745 NM_000272 NM_001128178 NM_001128179 NM_207181	-276395	-	NM_005054 U64675	95675	-	AL136868 NM_001037866 NM_001123363 NM_032260	97306	-	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	196641	-	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##BC031315|LINC00116|205251|long intergenic non-protein coding RNA 116##AJ001815|NPHP1|4867|nephronophthisis 1 (juvenile)##BC032939|NPHP1|4867|nephronophthisis 1 (juvenile)##BX571745|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_000272|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128178|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128179|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_207181|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)	0.359202	CTCF.p2:18:0.359
chr16	27379563	27379665	reg1010814.p2	9.950	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-38270	+	TSC_hg19_v1_chr16_+_27325301 BC110343 AK223591 X52425	-54296	+	TSC_hg19_v1_chr16_+_27325254 AK314863 NM_000418 NM_001008699 AK303255	-54360	+	AK292663 NM_181078 NM_181079 AK312825	33873	+	NM_021798 AY358826 AF254067	58990	+	TSC_hg19_v1_chr16_-_27561218 BX648143	181604	-	BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BC110343|IL4R|3566|interleukin 4 receptor##AK223591|IL4R|3566|interleukin 4 receptor##X52425|IL4R|3566|interleukin 4 receptor##AK314863|IL4R|3566|interleukin 4 receptor##NM_000418|IL4R|3566|interleukin 4 receptor##NM_001008699|IL4R|3566|interleukin 4 receptor##AK303255|IL4R|3566|interleukin 4 receptor##AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.999131	CTCF.p2:18:0.999
chr21	15352656	15352808	reg1011959.p2	9.950	+	AY172978 NM_174981 AY465173	-370233	+	BC101132 BC101133 BC101134 BC107038 BC107039 BC113810 AF218570 AF339514 AF339515 AF339516 NM_181704 NM_182481 NM_182482 NM_182484 AF527550 AF527551 AF527553 NM_001187 U19180 BC017024 TSC_hg19_v1_chr21_-_11098961 AK292540 BC064647	-4253833	-	AK308254 AK314285 TSC_hg19_v1_chr21_-_10990898 AF007118 AF495908 AY219886 AY219887 AY219888 AL833345 BC028719 NM_199259 NM_199260 NM_199261	-4361834	-	TSC_hg19_v1_chr21_+_15399763 BC070147 BC024173 BC048201	47032	+	AB463838 AY197607 NM_198996	226516	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	235765	+	AY172978|POTED|317754|POTE ankyrin domain family, member D##NM_174981|POTED|317754|POTE ankyrin domain family, member D##AY465173|POTEB|339010|POTE ankyrin domain family, member B##BC101132|BAGE2|85319|B melanoma antigen family, member 2##BC101133|BAGE2|85319|B melanoma antigen family, member 2##BC101134|BAGE3|85318|B melanoma antigen family, member 3##BC107038|BAGE|574|B melanoma antigen##BC107039|BAGE|574|B melanoma antigen##BC113810|BAGE|574|B melanoma antigen##AF218570|BAGE2|85319|B melanoma antigen family, member 2##AF339514|BAGE3|85318|B melanoma antigen family, member 3##AF339515|BAGE4|85317|B melanoma antigen family, member 4##AF339516|BAGE5|85316|B melanoma antigen family, member 5##NM_181704|BAGE4|85317|B melanoma antigen family, member 4##NM_182481|BAGE3|85318|B melanoma antigen family, member 3##NM_182482|BAGE2|85319|B melanoma antigen family, member 2##NM_182484|BAGE5|85316|B melanoma antigen family, member 5##AF527550|BAGE|574|B melanoma antigen##AF527551|BAGE|574|B melanoma antigen##AF527553|BAGE|574|B melanoma antigen##NM_001187|BAGE|574|B melanoma antigen##U19180|BAGE|574|B melanoma antigen##AK292540|BAGE2|85319|B melanoma antigen family, member 2##AK308254|TPTE|7179|transmembrane phosphatase with tensin homology##AK314285|TPTE|7179|transmembrane phosphatase with tensin homology##AF007118|TPTE|7179|transmembrane phosphatase with tensin homology##AF495908|TPTE|7179|transmembrane phosphatase with tensin homology##AY219886|TPTE|7179|transmembrane phosphatase with tensin homology##AY219887|TPTE|7179|transmembrane phosphatase with tensin homology##AY219888|TPTE|7179|transmembrane phosphatase with tensin homology##AL833345|TPTE|7179|transmembrane phosphatase with tensin homology##BC028719|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199259|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199260|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199261|TPTE|7179|transmembrane phosphatase with tensin homology##AY197607|LIPI|149998|lipase, member I##NM_198996|LIPI|149998|lipase, member I##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11	1.355957	CTCF.p2:38:0.994	CTCF.p2:-39:0.362
chr4	7297815	7297934	reg1014464.p1	9.950	+	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-103479	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-228073	-	AF298592 DQ891523 DQ894713 TSC_hg19_v1_chr4_-_7069792 AK098475 AK301695 AK312882 BC024242 NM_025196	-228097	-	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	138782	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	643514	-	TSC_hg19_v1_chr4_-_8073714 AK094798	775842	-	NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AF298592|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ891523|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ894713|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK098475|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK301695|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK312882|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##BC024242|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##NM_025196|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2	0.984951	CTCF.p2:-14:0.985
chr7	92053998	92054131	reg1013228.p1	9.950	+	AB385463 TSC_hg19_v1_chr7_+_91924416	-129709	+	TSC_hg19_v1_chr7_+_91875536 AB037807 NM_019004 BC063861	-178455	+	TSC_hg19_v1_chr7_-_91875443 AJ294850 AF388384 NM_194455 NM_194456	-178651	-	TSC_hg19_v1_chr7_+_92076769 NM_021167 BC019350	22712	+	TSC_hg19_v1_chr7_+_92076806 AK315788 AK026142 BC031091	22776	+	AB587458 TSC_hg19_v1_chr7_+_92077172	23052	+	AB037807|ANKIB1|54467|ankyrin repeat and IBR domain containing 1##NM_019004|ANKIB1|54467|ankyrin repeat and IBR domain containing 1##BC063861|ANKIB1|54467|ankyrin repeat and IBR domain containing 1##AJ294850|KRIT1|889|KRIT1, ankyrin repeat containing##AF388384|KRIT1|889|KRIT1, ankyrin repeat containing##NM_194455|KRIT1|889|KRIT1, ankyrin repeat containing##NM_194456|KRIT1|889|KRIT1, ankyrin repeat containing##NM_021167|GATAD1|57798|GATA zinc finger domain containing 1##BC019350|GATAD1|57798|GATA zinc finger domain containing 1##AK315788|GATAD1|57798|GATA zinc finger domain containing 1##AK026142|GATAD1|57798|GATA zinc finger domain containing 1##BC031091|GATAD1|57798|GATA zinc finger domain containing 1	0.999598	CTCF.p2:16:1.000
chr9	108188463	108188579	reg1011565.p1	9.950	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	-181454	+	TSC_hg19_v1_chr9_+_108006937 AJ272365	-181570	+	TSC_hg19_v1_chr9_+_108006931 NM_080546	-181608	+	AK309817 TSC_hg19_v1_chr9_+_108210342 NM_001145313 NM_031919 NM_207647 AF088031 AK299350 AK296433 AK299491 AF316830	21742	+	TSC_hg19_v1_chr9_+_108320420 NM_001079802 NM_001198963 NM_006731 AK300840 AK304460 BC058842 AB008226 AB609007	131902	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	236236	+	AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1##AJ272365|SLC44A1|23446|solute carrier family 44, member 1##NM_080546|SLC44A1|23446|solute carrier family 44, member 1##AK309817|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001145313|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_031919|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_207647|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF088031|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299350|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK296433|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299491|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF316830|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001079802|FKTN|2218|fukutin##NM_001198963|FKTN|2218|fukutin##NM_006731|FKTN|2218|fukutin##AK300840|FKTN|2218|fukutin##AK304460|FKTN|2218|fukutin##BC058842|FKTN|2218|fukutin##AB008226|FKTN|2218|fukutin##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2	0.972484	CTCF.p2:-12:0.972
chr13	92374698	92374818	reg1010340.p2	9.949	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-323854	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-4049889	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-6001319	-	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1504669	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	2757068	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	2873671	-	BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase	0.979896	CTCF.p2:-9:0.980
chr2	233311061	233311180	reg1013387.p1	9.949	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	-39544	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	-67737	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-484760	+	AK313163 NM_001631 BC132678 M31008 M15694	9750	+	AB030579 Y16187 AY358923 NM_004826 BC050453	41413	-	NM_001195129	74052	+	NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal##AB030579|ECEL1|9427|endothelin converting enzyme-like 1##Y16187|ECEL1|9427|endothelin converting enzyme-like 1##AY358923|ECEL1|9427|endothelin converting enzyme-like 1##NM_004826|ECEL1|9427|endothelin converting enzyme-like 1##BC050453|ECEL1|9427|endothelin converting enzyme-like 1##NM_001195129|PRSS56|646960|protease, serine, 56	0.991457	CTCF.p2:-2:0.991
chr3	11693532	11693663	reg1011247.p2	9.949	+	TSC_hg19_v1_chr3_-_11685397 NM_001128219	-8201	-	AK307708 TSC_hg19_v1_chr3_-_11623831 NM_001128220	-69764	-	TSC_hg19_v1_chr3_-_11610264 AK308761 NM_001128221	-83267	-	TSC_hg19_v1_chr3_-_11762012 D50911 BC001514 AK130542 BC000763 BC003038 NM_014667	68518	-	EU832515 EU832596 AK295839 TSC_hg19_v1_chr3_-_11888358 AK310993 BC015088 NM_138807 AK092776 AX747723 AK309733 AK303598	194662	-	TSC_hg19_v1_chr3_+_12045861 NM_003178 NM_133625 AK094464 BC051307 AB209088 U40215 AF077671 AF077737	352306	+	NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)##AK307708|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)##AK308761|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128221|VGLL4|9686|vestigial like 4 (Drosophila)##D50911|VGLL4|9686|vestigial like 4 (Drosophila)##BC001514|VGLL4|9686|vestigial like 4 (Drosophila)##AK130542|VGLL4|9686|vestigial like 4 (Drosophila)##BC000763|VGLL4|9686|vestigial like 4 (Drosophila)##BC003038|VGLL4|9686|vestigial like 4 (Drosophila)##NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)##EU832515|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##EU832596|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK295839|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK310993|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##BC015088|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_138807|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK092776|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK309733|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK303598|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_003178|SYN2|6854|synapsin II##NM_133625|SYN2|6854|synapsin II##AK094464|SYN2|6854|synapsin II##BC051307|SYN2|6854|synapsin II##AB209088|SYN2|6854|synapsin II##U40215|SYN2|6854|synapsin II##AF077671|SYN2|6854|synapsin II##AF077737|SYN2|6854|synapsin II	0.29368	CTCF.p2:1:0.294
chr9	1940198	1940317	reg1011320.p1	9.949	+	AF130729 NM_181872	-889648	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-889887	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-889913	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	75039	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	681550	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	681817	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.119058	
chr10	97205744	97205853	reg1011644.p1	9.948	+	AM393082 NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_006434	-4883	-	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	-155016	-	AK126134 NM_207321	-251842	+	TSC_hg19_v1_chr10_-_97321129 AB037717 BC152463 AK022468 AK300407 AK304753 AL117472 AM260536 NM_015385 NM_024991	115341	-	TSC_hg19_v1_chr10_-_97416472 U68758 U76542 BC106054 AK225455 AK225465 AK226032 AK295487 X94453 AK299557 AK312271 BC117240 BC117242 BC143930	210639	-	TSC_hg19_v1_chr10_-_97416598 NM_001017423 NM_002860	210783	-	AM393082|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1##NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1##AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1##AK126134|C10orf129|142827|chromosome 10 open reading frame 129##NM_207321|C10orf129|142827|chromosome 10 open reading frame 129##AB037717|SORBS1|10580|sorbin and SH3 domain containing 1##BC152463|SORBS1|10580|sorbin and SH3 domain containing 1##AK022468|SORBS1|10580|sorbin and SH3 domain containing 1##AK300407|SORBS1|10580|sorbin and SH3 domain containing 1##AK304753|SORBS1|10580|sorbin and SH3 domain containing 1##AL117472|SORBS1|10580|sorbin and SH3 domain containing 1##AM260536|SORBS1|10580|sorbin and SH3 domain containing 1##NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1##NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1##U68758|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##U76542|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC106054|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK225455|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK225465|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK226032|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK295487|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##X94453|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK299557|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AK312271|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC117240|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC117242|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##BC143930|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##NM_001017423|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##NM_002860|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1	0.986173	CTCF.p2:8:0.986
chr1	176918281	176918403	reg1009645.p1	9.948	+	AF342989 AF342990 BC062665 BC104644 NM_020318 NM_021936 BC152552	-486030	+	AF527539 TSC_hg19_v1_chr1_-_176176377	-741966	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	-741973	-	BC142697 AB006627 BC146795 TSC_hg19_v1_chr1_-_177133827	215483	-	AK307820 AK295126 BC032870 BC049377 TSC_hg19_v1_chr1_-_177134004 NM_004319 NM_207108	215644	-	TSC_hg19_v1_chr1_-_177134042 AK309094	215733	-	AF342989|PAPPA2|60676|pappalysin 2##AF342990|PAPPA2|60676|pappalysin 2##BC062665|PAPPA2|60676|pappalysin 2##BC104644|PAPPA2|60676|pappalysin 2##NM_020318|PAPPA2|60676|pappalysin 2##NM_021936|PAPPA2|60676|pappalysin 2##BC152552|PAPPA2|60676|pappalysin 2##AF527539|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2##BC142697|ASTN1|460|astrotactin 1##AB006627|ASTN1|460|astrotactin 1##BC146795|ASTN1|460|astrotactin 1##AK307820|ASTN1|460|astrotactin 1##AK295126|ASTN1|460|astrotactin 1##BC032870|ASTN1|460|astrotactin 1##BC049377|ASTN1|460|astrotactin 1##NM_004319|ASTN1|460|astrotactin 1##NM_207108|ASTN1|460|astrotactin 1##AK309094|ASTN1|460|astrotactin 1	1.011231	CTCF.p2:32:0.997
chr9	139118076	139118185	reg1009769.p1	9.948	+	AF156888 NM_178138 AB593067 AB593063 AB593062	-21166	-	AB590758 AB593065 AF156889 NM_014564 AB593066 TSC_hg19_v1_chr9_-_139095090	-23142	-	TSC_hg19_v1_chr9_-_139010722 NM_152833	-107401	-	BC047604 AB527428 TSC_hg19_v1_chr9_-_139137659 AJ318051 NM_181701	19555	-	BC009979 BC017353 NM_001145638 NM_015597 TSC_hg19_v1_chr9_+_139221994	103836	+	NM_001145639	129378	+	AF156888|LHX3|8022|LIM homeobox 3##NM_178138|LHX3|8022|LIM homeobox 3##AB593067|LHX3|8022|LIM homeobox 3##AB593063|LHX3|8022|LIM homeobox 3##AB593062|LHX3|8022|LIM homeobox 3##AB593065|LHX3|8022|LIM homeobox 3##AF156889|LHX3|8022|LIM homeobox 3##NM_014564|LHX3|8022|LIM homeobox 3##AB593066|LHX3|8022|LIM homeobox 3##NM_152833|C9orf69|90120|chromosome 9 open reading frame 69##BC047604|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##AJ318051|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##NM_181701|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##BC009979|GPSM1|26086|G-protein signaling modulator 1##BC017353|GPSM1|26086|G-protein signaling modulator 1##NM_001145638|GPSM1|26086|G-protein signaling modulator 1##NM_015597|GPSM1|26086|G-protein signaling modulator 1##NM_001145639|GPSM1|26086|G-protein signaling modulator 1	0.988258	CTCF.p2:6:0.988
chr3	186938098	186938203	reg1011041.p1	9.947	+	BC065202 NM_153708 BC034744 DQ890807 DQ893962 AY562235	-22808	+	TSC_hg19_v1_chr3_-_186857285 L05096 AB063610 BC012328 NM_052969	-80894	-	AK292879 BC040009 NM_003032 X62822 BC031476 L11720 X54363	-198478	+	BC106945 BC106946 TSC_hg19_v1_chr3_-_187009489 AK291686 AK129893 AK304334 AK300663 BX647237 AK291157 CR749615 BC039724 NM_001031849 NM_001879 NM_139125	71489	-	BC013161 NM_022147 AJ251832 AY562238 DQ891046 DQ894225	148048	+	BC032625 AK312177 TSC_hg19_v1_chr3_-_187388181 NM_001048	450002	-	BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1##NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1##BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1##AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1##L05096|RPL39L|116832|ribosomal protein L39-like##AB063610|RPL39L|116832|ribosomal protein L39-like##BC012328|RPL39L|116832|ribosomal protein L39-like##NM_052969|RPL39L|116832|ribosomal protein L39-like##AK292879|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC040009|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_003032|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X62822|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC031476|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##L11720|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X54363|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC013161|RTP4|64108|receptor (chemosensory) transporter protein 4##NM_022147|RTP4|64108|receptor (chemosensory) transporter protein 4##AJ251832|RTP4|64108|receptor (chemosensory) transporter protein 4##AY562238|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ891046|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ894225|RTP4|64108|receptor (chemosensory) transporter protein 4##BC032625|SST|6750|somatostatin##AK312177|SST|6750|somatostatin##NM_001048|SST|6750|somatostatin	0.327371	CTCF.p2:-2:0.327
chr5	160229704	160229834	reg1013457.p1	9.947	+	AK025130 TSC_hg19_v1_chr5_-_160112393	-117430	-	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-380866	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-380915	+	AB018258 AK295081 AK090832 AX746642 NM_025153	49362	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	745357	-	NM_000811	882888	+	AK025130|ATP10B|23120|ATPase, class V, type 10B##BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6	0.03983	
chr6	152445704	152445812	reg1011303.p1	9.947	+	X03635 AK304833 M69297 AF258449 AF258450 AF258451 NM_000125 TSC_hg19_v1_chr6_+_152128813 BC128573 BC128574 EU930361 AB587448 AB307713 AY750962 JF810888 U47678	-316892	+	NM_001122740 U68067	-317305	+	NM_001122741 AK293019 AK313644	-318935	+	TSC_hg19_v1_chr6_-_152623240 AK310977	177493	-	TSC_hg19_v1_chr6_-_152702331 BX537517	256583	-	AK056122 TSC_hg19_v1_chr6_-_152702456 BC039121	256716	-	X03635|ESR1|2099|estrogen receptor 1##AK304833|ESR1|2099|estrogen receptor 1##M69297|ESR1|2099|estrogen receptor 1##AF258449|ESR1|2099|estrogen receptor 1##AF258450|ESR1|2099|estrogen receptor 1##AF258451|ESR1|2099|estrogen receptor 1##NM_000125|ESR1|2099|estrogen receptor 1##BC128573|ESR1|2099|estrogen receptor 1##BC128574|ESR1|2099|estrogen receptor 1##AB307713|ESR1|2099|estrogen receptor 1##AY750962|ESR1|2099|estrogen receptor 1##JF810888|ESR1|2099|estrogen receptor 1##U47678|ESR1|2099|estrogen receptor 1##NM_001122740|ESR1|2099|estrogen receptor 1##U68067|ESR1|2099|estrogen receptor 1##NM_001122741|ESR1|2099|estrogen receptor 1##AK293019|ESR1|2099|estrogen receptor 1##AK313644|ESR1|2099|estrogen receptor 1##AK310977|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##BX537517|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AK056122|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##BC039121|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	0.747553	CTCF.p2:7:0.748
chr6	20875735	20875856	reg1013975.p1	9.947	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-341072	+	CR749285 NM_001243076	-471762	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-473692	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	718577	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	790864	+	BC015850 NM_000948	1421934	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.96017	CTCF.p2:5:0.960
chr12	56618106	56618239	reg1002774.p2	9.944	+	TSC_hg19_v1_chr12_+_56618125 NM_024068	-49	+	TSC_hg19_v1_chr12_-_56615718 BC024284 AK300752 NM_005785 NM_194358 AK314811 AK304576 NM_194359	-2447	-	NM_001242826 BC011626 BC095418 TSC_hg19_v1_chr12_-_56615651 BC036267	-2600	-	BC006171 TSC_hg19_v1_chr12_+_56618157 AY203942	37	+	NM_173596 TSC_hg19_v1_chr12_+_56623836 AK298331 AK313188	5665	+	NM_001135195 AK172768 TSC_hg19_v1_chr12_+_56624545 BC027884	6391	+	NM_024068|OBFC2B|79035|oligonucleotide/oligosaccharide-binding fold containing 2B##BC024284|RNF41|10193|ring finger protein 41##AK300752|RNF41|10193|ring finger protein 41##NM_005785|RNF41|10193|ring finger protein 41##NM_194358|RNF41|10193|ring finger protein 41##AK314811|RNF41|10193|ring finger protein 41##AK304576|RNF41|10193|ring finger protein 41##NM_194359|RNF41|10193|ring finger protein 41##NM_001242826|RNF41|10193|ring finger protein 41##BC011626|RNF41|10193|ring finger protein 41##BC095418|RNF41|10193|ring finger protein 41##BC036267|RNF41|10193|ring finger protein 41##BC006171|OBFC2B|79035|oligonucleotide/oligosaccharide-binding fold containing 2B##AY203942|OBFC2B|79035|oligonucleotide/oligosaccharide-binding fold containing 2B##NM_173596|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##AK298331|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##AK313188|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##NM_001135195|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##AK172768|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##BC027884|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5	0.464321	CTCF.p2:9:0.448
chr15	79202253	79202402	reg1012720.p1	9.944	+	TSC_hg19_v1_chr15_+_79165343 AK300789 BC067826 AB385578 CU692730 DQ892602 DQ895837 AK310181	-36964	+	TSC_hg19_v1_chr15_+_79165314 AK310702 BC141840 AF070664 AF167173 AK310592 AL137697 AF109188 AF161546	-37008	+	TSC_hg19_v1_chr15_+_79165283 AK098485 AF218011 AF100615 AY148481 AK296650 BC002936 BC022845	-37080	+	TSC_hg19_v1_chr15_-_79237350 AF426247 AF426248 CR456881 CU677980 DQ890683 DQ893772 AK295583 X16832	35008	-	TSC_hg19_v1_chr15_-_79237389 AL110099 BC002479 BC018821 AK309491 AK314698 D28436 AK130158 NM_004390	35072	-	NM_153815 S62035	95674	-	AK300789|MORF4L1|10933|mortality factor 4 like 1##BC067826|MORF4L1|10933|mortality factor 4 like 1##DQ892602|MORF4L1|10933|mortality factor 4 like 1##DQ895837|MORF4L1|10933|mortality factor 4 like 1##AK310181|MORF4L1|10933|mortality factor 4 like 1##AK310702|MORF4L1|10933|mortality factor 4 like 1##BC141840|MORF4L1|10933|mortality factor 4 like 1##AF070664|MORF4L1|10933|mortality factor 4 like 1##AF167173|MORF4L1|10933|mortality factor 4 like 1##AK310592|MORF4L1|10933|mortality factor 4 like 1##AL137697|MORF4L1|10933|mortality factor 4 like 1##AF109188|MORF4L1|10933|mortality factor 4 like 1##AF161546|MORF4L1|10933|mortality factor 4 like 1##AK098485|MORF4L1|10933|mortality factor 4 like 1##AF218011|MORF4L1|10933|mortality factor 4 like 1##AF100615|MORF4L1|10933|mortality factor 4 like 1##AY148481|MORF4L1|10933|mortality factor 4 like 1##AK296650|MORF4L1|10933|mortality factor 4 like 1##BC002936|MORF4L1|10933|mortality factor 4 like 1##BC022845|MORF4L1|10933|mortality factor 4 like 1##AF426247|CTSH|1512|cathepsin H##AF426248|CTSH|1512|cathepsin H##CR456881|CTSH|1512|cathepsin H##DQ890683|CTSH|1512|cathepsin H##DQ893772|CTSH|1512|cathepsin H##X16832|CTSH|1512|cathepsin H##AL110099|CTSH|1512|cathepsin H##BC002479|CTSH|1512|cathepsin H##BC018821|CTSH|1512|cathepsin H##AK309491|CTSH|1512|cathepsin H##AK314698|CTSH|1512|cathepsin H##D28436|CTSH|1512|cathepsin H##AK130158|CTSH|1512|cathepsin H##NM_004390|CTSH|1512|cathepsin H##NM_153815|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##S62035|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1	0.19556	
chr17	7738280	7738405	reg1011225.p2	9.944	+	NM_020877 AB385476 AB463017	-115297	+	AK314841 TSC_hg19_v1_chr17_+_7608520 BC042944 NM_001406 U57001 AK027329	-129863	+	AY766323 DQ431240 NM_001143992 NM_018081 AK001247 AK225273 AK225411 AK303246 BC002336	-146607	+	TSC_hg19_v1_chr17_+_7741696 BC067879	3331	+	AB002344 NM_001080424	4891	+	TSC_hg19_v1_chr17_+_7758383 AK000032 BC057812 NM_203411	20040	+	NM_020877|DNAH2|146754|dynein, axonemal, heavy chain 2##AK314841|EFNB3|1949|ephrin-B3##BC042944|EFNB3|1949|ephrin-B3##NM_001406|EFNB3|1949|ephrin-B3##U57001|EFNB3|1949|ephrin-B3##AK027329|EFNB3|1949|ephrin-B3##AY766323|WRAP53|55135|WD repeat containing, antisense to TP53##DQ431240|WRAP53|55135|WD repeat containing, antisense to TP53##NM_001143992|WRAP53|55135|WD repeat containing, antisense to TP53##NM_018081|WRAP53|55135|WD repeat containing, antisense to TP53##AK001247|WRAP53|55135|WD repeat containing, antisense to TP53##AK225273|WRAP53|55135|WD repeat containing, antisense to TP53##AK225411|WRAP53|55135|WD repeat containing, antisense to TP53##AK303246|WRAP53|55135|WD repeat containing, antisense to TP53##BC002336|WRAP53|55135|WD repeat containing, antisense to TP53##AB002344|KDM6B|23135|lysine (K)-specific demethylase 6B##NM_001080424|KDM6B|23135|lysine (K)-specific demethylase 6B##AK000032|TMEM88|92162|transmembrane protein 88##BC057812|TMEM88|92162|transmembrane protein 88##NM_203411|TMEM88|92162|transmembrane protein 88	0.94931	CTCF.p2:-9:0.949
chr2	69253226	69253365	reg1014491.p1	9.944	+	TSC_hg19_v1_chr2_+_69240310 NM_018153 NM_032208 NM_053034 AF279145 AK001463 AY928974 AY928975 AY928976 AY928977 AK223273 BC012074 AK309553 AF421380 AK292113 CU680200 EU832615 EU832687	-12912	+	AB039886 AJ966789 NM_019617 AB590637 AY139184 AK098489 AY456961 BC059778 AY359050	-51553	+	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	-73239	-	TSC_hg19_v1_chr2_-_69614353 M90516 BC045641 NM_001244710 NM_002056	361110	-	AJ132584 AF132967 AB528729 HQ258750 TSC_hg19_v1_chr2_-_69664568 AK300700 AK308567	411278	-	TSC_hg19_v1_chr2_-_69664606 AY286306 AY286307 BX538347	411319	-	NM_018153|ANTXR1|84168|anthrax toxin receptor 1##NM_032208|ANTXR1|84168|anthrax toxin receptor 1##NM_053034|ANTXR1|84168|anthrax toxin receptor 1##AF279145|ANTXR1|84168|anthrax toxin receptor 1##AK001463|ANTXR1|84168|anthrax toxin receptor 1##AK223273|ANTXR1|84168|anthrax toxin receptor 1##BC012074|ANTXR1|84168|anthrax toxin receptor 1##AK309553|ANTXR1|84168|anthrax toxin receptor 1##AF421380|ANTXR1|84168|anthrax toxin receptor 1##AK292113|ANTXR1|84168|anthrax toxin receptor 1##EU832615|ANTXR1|84168|anthrax toxin receptor 1##EU832687|ANTXR1|84168|anthrax toxin receptor 1##AB039886|GKN1|56287|gastrokine 1##AJ966789|GKN1|56287|gastrokine 1##NM_019617|GKN1|56287|gastrokine 1##AY139184|GKN1|56287|gastrokine 1##AK098489|GKN1|56287|gastrokine 1##AY456961|GKN1|56287|gastrokine 1##BC059778|GKN1|56287|gastrokine 1##AY359050|GKN1|56287|gastrokine 1##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2##M90516|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##BC045641|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_001244710|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_002056|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##AJ132584|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AF132967|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##HQ258750|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK300700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK308567|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286306|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286307|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BX538347|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	0.0	
chr14	72322242	72322379	reg1012791.p1	9.943	+	AF090989 AF090990 NM_015556	-326269	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-947859	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-948177	+	AK294895 NM_001204423	76506	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	76843	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	77556	+	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6	1.020505	CTCF.p2:8:1.000
chr15	80061611	80061745	reg1009973.p1	9.943	+	AB028947 NM_015206 BC152466	-336819	+	TSC_hg19_v1_chr15_+_79603557 AJ132270 CR457384	-458111	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	-458175	+	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	127702	-	NM_001199758	127948	-	AL109714 NM_001100879	145919	-	AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##AJ132270|TMED3|23423|transmembrane emp24 protein transport domain containing 3##CR457384|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL109714|ST20|400410|suppressor of tumorigenicity 20##NM_001100879|ST20|400410|suppressor of tumorigenicity 20	0.78575	CTCF.p2:2:0.702
chr9	116163750	116163863	reg1011790.p1	9.943	+	TSC_hg19_v1_chr9_-_116163586 AK131490 NM_000031	-198	-	TSC_hg19_v1_chr9_-_116163563 AK290490 AK312552	-246	-	TSC_hg19_v1_chr9_-_116163541 BC000977	-268	-	AB527738 AF226077 AY720898 AK092840 TSC_hg19_v1_chr9_-_116172627	8795	-	TSC_hg19_v1_chr9_-_116172655 BC003166 BC004170 AK074782 AK096050	8839	-	TSC_hg19_v1_chr9_-_116172658 AK074629	8861	-	AK131490|ALAD|210|aminolevulinate dehydratase##NM_000031|ALAD|210|aminolevulinate dehydratase##AK290490|ALAD|210|aminolevulinate dehydratase##AK312552|ALAD|210|aminolevulinate dehydratase##BC000977|ALAD|210|aminolevulinate dehydratase##AF226077|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##AY720898|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##AK092840|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##BC003166|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##BC004170|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##AK074782|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##AK096050|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##AK074629|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)	0.964994	CTCF.p2:-12:0.965
chr5	131721163	131721316	reg1012019.p1	9.941	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-15731	+	BX538252 TSC_hg19_v1_chr5_-_131705330	-15940	-	TSC_hg19_v1_chr5_-_131630942 BC030525	-90266	-	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	25389	+	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	105242	-	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	157953	-	NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BX538252|LOC553103|553103|uncharacterized LOC553103##AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)	0.974129	CTCF.p2:14:0.974
chr1	31867592	31867764	reg1011441.p1	9.940	+	S67314 AK314122 BT006727 CR456867 DQ893154 DQ896449 Y10255 X56549 BC007021 NM_004102	-21808	-	TSC_hg19_v1_chr1_+_31769878 AK024049 AK307478 AF151085 AK001929 AK302248 AK302343 BC050609 BC007446 AF151077 BC000685 AF247661	-97755	+	TSC_hg19_v1_chr1_+_31769844 AK022506 NM_016505	-97843	+	AK127659 NM_001199038	14733	+	NM_001199037 AK298512	15355	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	18388	+	S67314|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##AK314122|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##BT006727|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##CR456867|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##DQ893154|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##DQ896449|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##Y10255|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##X56549|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##BC007021|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##NM_004102|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##AK024049|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK307478|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AF151085|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK001929|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK302248|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK302343|ZCCHC17|51538|zinc finger, CCHC domain containing 17##BC050609|ZCCHC17|51538|zinc finger, CCHC domain containing 17##BC007446|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AF151077|ZCCHC17|51538|zinc finger, CCHC domain containing 17##BC000685|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AF247661|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK022506|ZCCHC17|51538|zinc finger, CCHC domain containing 17##NM_016505|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK127659|SERINC2|347735|serine incorporator 2##NM_001199038|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2	0.996582	CTCF.p2:-21:0.997
chr9	121284485	121284605	reg1011601.p1	9.940	+	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-817858	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	-817931	+	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	-818081	+	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	847113	-	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	2057808	-	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	2192172	-	U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4##BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9	1.112303	CTCF.p2:-12:0.960
chrX	115010501	115010609	reg1010392.p1	9.940	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-182687	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-213513	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-214949	+	BC003645 TSC_hg19_v1_chrX_-_115085443	74884	-	AK313927 NM_000686 X87723 U16957	291440	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	557212	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428913	CTCF.p2:-7:0.429
chr1	154732997	154733153	reg1012013.p2	9.939	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-132610	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-132661	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-152375	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	99187	-	BX649146 TSC_hg19_v1_chr1_-_154840541	107426	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	109671	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.874211	CTCF.p2:1:0.855
chr1	32800839	32800996	reg1010813.p2	9.939	+	TSC_hg19_v1_chr1_+_32757740 BC000301 AK299792 AY627042 AB451297 AB451430 AB463736 CR541717 CU674144 DQ891398 DQ894577	-43177	+	D50405 NM_004964 TSC_hg19_v1_chr1_+_32757707	-43209	+	AK225555 TSC_hg19_v1_chr1_+_32757704 AK296308 AK313061	-43214	+	TSC_hg19_v1_chr1_-_32801835 AB528178 CU688192 AM393505 DQ893237 DQ896567 X70326 AL713653 AY007131 BC007904 BC066915 NM_023009	814	-	BC035354 NM_052841	26912	+	NM_001167676	26926	-	BC000301|HDAC1|3065|histone deacetylase 1##AK299792|HDAC1|3065|histone deacetylase 1##AY627042|HDAC1|3065|histone deacetylase 1##AB451297|HDAC1|3065|histone deacetylase 1##AB451430|HDAC1|3065|histone deacetylase 1##CR541717|HDAC1|3065|histone deacetylase 1##DQ891398|HDAC1|3065|histone deacetylase 1##DQ894577|HDAC1|3065|histone deacetylase 1##D50405|HDAC1|3065|histone deacetylase 1##NM_004964|HDAC1|3065|histone deacetylase 1##AK225555|HDAC1|3065|histone deacetylase 1##AK296308|HDAC1|3065|histone deacetylase 1##AK313061|HDAC1|3065|histone deacetylase 1##AM393505|MARCKSL1|65108|MARCKS-like 1##DQ893237|MARCKSL1|65108|MARCKS-like 1##DQ896567|MARCKSL1|65108|MARCKS-like 1##X70326|MARCKSL1|65108|MARCKS-like 1##AL713653|MARCKSL1|65108|MARCKS-like 1##AY007131|MARCKSL1|65108|MARCKS-like 1##BC007904|MARCKSL1|65108|MARCKS-like 1##BC066915|MARCKSL1|65108|MARCKS-like 1##NM_023009|MARCKSL1|65108|MARCKS-like 1##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071	0.737841	CTCF.p2:-7:0.738
chr4	74595406	74595545	reg1014025.p1	9.937	+	AY217664 BC058835 NM_177532 AY217665 CR749283 AK126346 NM_201431	-109256	-	AK290556 NM_001133 BC109020 BC109021 L35486	-248005	+	NM_001134 V01514 AK297669 TSC_hg19_v1_chr4_+_74301937 AK297674 AK314817 BC027881 DQ890942 DQ894103 CU693306	-293520	+	NM_000584 Y00787 AK131067 AK311874 M17017 M26383 BC013615 AF043337 AB590232 DQ890564 DQ893727 BT007067 CR542151 Z11686	10823	+	NM_002993 AK311981 U81234 BC013744 DQ891500 DQ894692 AB463491	106894	+	NM_002620 BC130653 BC130657 HQ258042	123568	+	AY217664|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##BC058835|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_177532|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AY217665|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##CR749283|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK126346|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_201431|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK290556|AFM|173|afamin##NM_001133|AFM|173|afamin##BC109020|AFM|173|afamin##BC109021|AFM|173|afamin##L35486|AFM|173|afamin##NM_001134|AFP|174|alpha-fetoprotein##V01514|AFP|174|alpha-fetoprotein##AK297669|AFP|174|alpha-fetoprotein##AK297674|AFP|174|alpha-fetoprotein##AK314817|AFP|174|alpha-fetoprotein##BC027881|AFP|174|alpha-fetoprotein##DQ890942|AFP|174|alpha-fetoprotein##DQ894103|AFP|174|alpha-fetoprotein##NM_000584|IL8|3576|interleukin 8##Y00787|IL8|3576|interleukin 8##AK131067|IL8|3576|interleukin 8##AK311874|IL8|3576|interleukin 8##M17017|IL8|3576|interleukin 8##M26383|IL8|3576|interleukin 8##BC013615|IL8|3576|interleukin 8##DQ890564|IL8|3576|interleukin 8##DQ893727|IL8|3576|interleukin 8##BT007067|IL8|3576|interleukin 8##CR542151|IL8|3576|interleukin 8##Z11686|IL8|3576|interleukin 8##NM_002993|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##AK311981|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##U81234|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##BC013744|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ891500|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ894692|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##NM_002620|PF4V1|5197|platelet factor 4 variant 1##BC130653|PF4V1|5197|platelet factor 4 variant 1##BC130657|PF4V1|5197|platelet factor 4 variant 1##HQ258042|PF4V1|5197|platelet factor 4 variant 1	0.368993	CTCF.p2:2:0.369
chr1	228318792	228318916	reg1010138.p1	9.936	+	TSC_hg19_v1_chr1_-_228297001 BC052806 BX647745 AK056987 NM_181441 NM_181454 NM_181455 NM_181456 NM_181462 NM_181463 NM_181464 NM_181465	-21865	-	TSC_hg19_v1_chr1_-_228291059 AK123377	-27751	-	EU832643 EU832720 TSC_hg19_v1_chr1_-_228291006 BC062585 BC002843 NM_024319 AY137773	-27872	-	NM_001242839 TSC_hg19_v1_chr1_+_228327928 NM_000858 NM_001159390 NM_001242840	9018	+	TSC_hg19_v1_chr1_+_228327979 AK303845	9119	+	TSC_hg19_v1_chr1_+_228327982 BC006249	9137	+	BC052806|MRPL55|128308|mitochondrial ribosomal protein L55##BX647745|MRPL55|128308|mitochondrial ribosomal protein L55##AK056987|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181441|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181454|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181455|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181456|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181462|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181463|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181464|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181465|MRPL55|128308|mitochondrial ribosomal protein L55##AK123377|C1orf35|79169|chromosome 1 open reading frame 35##EU832643|C1orf35|79169|chromosome 1 open reading frame 35##EU832720|C1orf35|79169|chromosome 1 open reading frame 35##BC062585|C1orf35|79169|chromosome 1 open reading frame 35##BC002843|C1orf35|79169|chromosome 1 open reading frame 35##NM_024319|C1orf35|79169|chromosome 1 open reading frame 35##AY137773|C1orf35|79169|chromosome 1 open reading frame 35##NM_001242839|GUK1|2987|guanylate kinase 1##NM_000858|GUK1|2987|guanylate kinase 1##NM_001159390|GUK1|2987|guanylate kinase 1##NM_001242840|GUK1|2987|guanylate kinase 1##AK303845|GUK1|2987|guanylate kinase 1##BC006249|GUK1|2987|guanylate kinase 1	0.958952	CTCF.p2:7:0.959
chr13	75932193	75932309	reg1011254.p1	9.936	+	CR749622 TSC_hg19_v1_chr13_-_75901948	-30329	-	TSC_hg19_v1_chr13_-_74708425 AK291397	-1223855	-	AF161471 AF113122 NM_007249	-1224262	-	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	124087	-	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	179727	-	TSC_hg19_v1_chr13_+_76123890 AK313665 BC018125 NM_006002 M30496 CU676190 BT019359 CR456855	191673	+	CR749622|TBC1D4|9882|TBC1 domain family, member 4##AK291397|KLF12|11278|Kruppel-like factor 12##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6##AK313665|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BC018125|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_006002|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##M30496|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BT019359|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##CR456855|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)	0.193687	
chr2	42067930	42068043	reg1011432.p1	9.936	+	Y12878 Y12885 AK291696 BX537482 NM_001112802	-1328414	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	-1388764	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-1410555	-	AK124893 NM_001242815	112956	-	TSC_hg19_v1_chr2_+_42275160 NM_138370	207146	+	AB528999 TSC_hg19_v1_chr2_+_42275979	207975	+	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)	0.444454	CTCF.p2:-41:0.382
chr4	11430572	11430730	reg1010618.p3	9.936	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-119	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-744250	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-971641	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2055300	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2055324	-	AB463932 AF009801 EU446467 BC111966 NM_001189	2115424	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.028081	
chr5	121437506	121437643	reg1015419.p1	9.936	+	TSC_hg19_v1_chr5_-_121414058 NM_002317	-23539	-	BC089436 TSC_hg19_v1_chr5_-_121413971 AK312269	-23601	-	S78694 AF039291 AK297709 TSC_hg19_v1_chr5_-_121413955 AK298781 AK311354	-23641	-	AK057483 AY461732 NM_207317 AK290985	27671	+	NM_001195535	58296	+	AK299687 TSC_hg19_v1_chr5_+_121647434	209838	+	NM_002317|LOX|4015|lysyl oxidase##BC089436|LOX|4015|lysyl oxidase##AK312269|LOX|4015|lysyl oxidase##S78694|LOX|4015|lysyl oxidase##AF039291|LOX|4015|lysyl oxidase##AK297709|LOX|4015|lysyl oxidase##AK298781|LOX|4015|lysyl oxidase##AK057483|ZNF474|133923|zinc finger protein 474##AY461732|ZNF474|133923|zinc finger protein 474##NM_207317|ZNF474|133923|zinc finger protein 474##AK290985|ZNF474|133923|zinc finger protein 474##NM_001195535|LOC100505841|100505841|zinc finger protein 474-like##AK299687|SNCAIP|9627|synuclein, alpha interacting protein	0.954571	CTCF.p2:0:0.955
chr11	8625642	8625790	reg1013108.p1	9.935	+	TSC_hg19_v1_chr11_-_8615752 AK092720 AX747689 AK310754	-9941	-	AK293193 TSC_hg19_v1_chr11_-_8615705	-10013	-	AK093251 AX748014 BC031231 NM_030906	-10259	-	AB002296 NM_014818	54666	-	NM_000990	78278	+	TSC_hg19_v1_chr11_+_8704338 AK311767 BC005326 BC066326 U14968	78624	+	AK092720|STK33|65975|serine/threonine kinase 33##AK310754|STK33|65975|serine/threonine kinase 33##AK293193|STK33|65975|serine/threonine kinase 33##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33##AB002296|TRIM66|9866|tripartite motif containing 66##NM_014818|TRIM66|9866|tripartite motif containing 66##NM_000990|RPL27A|6157|ribosomal protein L27a##AK311767|RPL27A|6157|ribosomal protein L27a##BC005326|RPL27A|6157|ribosomal protein L27a##BC066326|RPL27A|6157|ribosomal protein L27a##U14968|RPL27A|6157|ribosomal protein L27a	0.0	
chr12	49457840	49457955	reg1010994.p2	9.935	+	AF010403 NM_003482	-8791	-	TSC_hg19_v1_chr12_-_49412538 AK293332 NM_001206710 AK303276 AK307994 AK310250 BC000358 AK097606 NM_001206709 NM_002733	-45326	-	AB527129 AB018292 BC136398 BC136399 TSC_hg19_v1_chr12_-_49393076 NM_015086 BC039264	-64897	-	BC014155 BC027482 NM_144593 AK098663 AY509932 AY327412	5871	-	AK313360 BC033507 HQ607677 HQ607678 NM_021044	30688	-	CU677167 CU678919 CU689172 DQ892407 DQ895619 TSC_hg19_v1_chr12_-_49504467 BC015015 BC031550 AB033000 AK001356	46528	-	AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##AK293332|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206710|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK303276|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK307994|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK310250|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##BC000358|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK097606|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206709|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_002733|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AB018292|DDN|23109|dendrin##BC136398|DDN|23109|dendrin##BC136399|DDN|23109|dendrin##NM_015086|DDN|23109|dendrin##BC039264|DDN|23109|dendrin##BC014155|RHEBL1|121268|Ras homolog enriched in brain like 1##BC027482|RHEBL1|121268|Ras homolog enriched in brain like 1##NM_144593|RHEBL1|121268|Ras homolog enriched in brain like 1##AK098663|RHEBL1|121268|Ras homolog enriched in brain like 1##AY509932|RHEBL1|121268|Ras homolog enriched in brain like 1##AY327412|RHEBL1|121268|Ras homolog enriched in brain like 1##AK313360|DHH|50846|desert hedgehog##BC033507|DHH|50846|desert hedgehog##HQ607677|DHH|50846|desert hedgehog##HQ607678|DHH|50846|desert hedgehog##NM_021044|DHH|50846|desert hedgehog##DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like##DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like##AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like	0.998153	CTCF.p2:-9:0.998
chr13	72453527	72453628	reg1011775.p1	9.935	+	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	-12143	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	-12814	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	-13318	-	TSC_hg19_v1_chr13_-_73301768 BC062361 BC013405 BC080523 AK025522 BC125183 NM_001071775	848254	-	EU834129 TSC_hg19_v1_chr13_+_73302063 AK300758 BX648605 NM_024808 AK298608 AK291496 BC056876 BC025367 EU832508 EU832589	848507	+	AB385417 TSC_hg19_v1_chr13_-_73355994 AB001743 AF330044	902410	-	AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##BC062361|MZT1|440145|mitotic spindle organizing protein 1##BC013405|MZT1|440145|mitotic spindle organizing protein 1##BC080523|MZT1|440145|mitotic spindle organizing protein 1##AK025522|MZT1|440145|mitotic spindle organizing protein 1##BC125183|MZT1|440145|mitotic spindle organizing protein 1##NM_001071775|MZT1|440145|mitotic spindle organizing protein 1##EU834129|BORA|79866|bora, aurora kinase A activator##AK300758|BORA|79866|bora, aurora kinase A activator##BX648605|BORA|79866|bora, aurora kinase A activator##NM_024808|BORA|79866|bora, aurora kinase A activator##AK298608|BORA|79866|bora, aurora kinase A activator##AK291496|BORA|79866|bora, aurora kinase A activator##BC056876|BORA|79866|bora, aurora kinase A activator##BC025367|BORA|79866|bora, aurora kinase A activator##EU832508|BORA|79866|bora, aurora kinase A activator##EU832589|BORA|79866|bora, aurora kinase A activator##AB001743|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AF330044|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)	0.191271	
chr21	27080905	27081039	reg1013749.p1	9.934	+	TSC_hg19_v1_chr21_+_27012067 AX810711 AB463809 AM392801 AM392870 AM393811 CU676060	-68872	+	AY358361 BC017779 TSC_hg19_v1_chr21_+_27012056	-68921	+	TSC_hg19_v1_chr21_+_27011769 AK312708 AY077698 AY016009 AX772824 AK294769	-69135	+	NM_001197297 TSC_hg19_v1_chr21_+_27107277	26300	+	TSC_hg19_v1_chr21_-_27107216 AK311899 AL110183 BC066310 AY544129	26316	-	TSC_hg19_v1_chr21_+_27107322 NM_002040	26353	+	AM392801|JAM2|58494|junctional adhesion molecule 2##AM392870|JAM2|58494|junctional adhesion molecule 2##AM393811|JAM2|58494|junctional adhesion molecule 2##AY358361|JAM2|58494|junctional adhesion molecule 2##BC017779|JAM2|58494|junctional adhesion molecule 2##AK312708|JAM2|58494|junctional adhesion molecule 2##AY077698|JAM2|58494|junctional adhesion molecule 2##AY016009|JAM2|58494|junctional adhesion molecule 2##AX772824|JAM2|58494|junctional adhesion molecule 2##AK294769|JAM2|58494|junctional adhesion molecule 2##NM_001197297|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa##AK311899|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##AL110183|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##BC066310|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##AY544129|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_002040|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	0.900692	CTCF.p2:11:0.901
chr11	83435072	83435189	reg1013372.p1	9.933	+	AK299778 CR933674 NM_001142702	-41679	-	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	-437725	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	-438097	-	AK294375 AK126776 AK295624 NM_001142700	549146	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	593251	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	1199102	-	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)	0.953522	CTCF.p2:6:0.954
chr16	84656521	84656651	reg1005312.p2	9.933	+	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	-4926	-	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	-5010	-	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	-118295	-	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	25548	+	NM_005153 TSC_hg19_v1_chr16_+_84733587 BC000263	76988	+	TSC_hg19_v1_chr16_+_84733603 AK315570 CR749515	77014	+	L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)##NM_005153|USP10|9100|ubiquitin specific peptidase 10##BC000263|USP10|9100|ubiquitin specific peptidase 10##AK315570|USP10|9100|ubiquitin specific peptidase 10##CR749515|USP10|9100|ubiquitin specific peptidase 10	0.968789	CTCF.p2:-14:0.969
chr6	43422366	43422486	reg1013069.p1	9.933	+	AY032599 NM_033450	-22938	+	TSC_hg19_v1_chr6_+_43395310 AK000002 NM_001198934	-27113	+	TSC_hg19_v1_chr6_-_43337215 BC098434 AF090114 NM_014345 BC030687	-85184	-	AY358126 NM_023932 BC110320	846	-	BC000230 BC006425 NM_206539	1359	-	TSC_hg19_v1_chr6_+_43445303 NM_001146016 NM_001146018 NM_001146019 NM_001146020 NM_080604	22853	+	AY032599|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_033450|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##AK000002|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_001198934|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##BC098434|ZNF318|24149|zinc finger protein 318##AF090114|ZNF318|24149|zinc finger protein 318##NM_014345|ZNF318|24149|zinc finger protein 318##BC030687|ZNF318|24149|zinc finger protein 318##AY358126|DLK2|65989|delta-like 2 homolog (Drosophila)##NM_023932|DLK2|65989|delta-like 2 homolog (Drosophila)##BC110320|DLK2|65989|delta-like 2 homolog (Drosophila)##BC000230|DLK2|65989|delta-like 2 homolog (Drosophila)##BC006425|DLK2|65989|delta-like 2 homolog (Drosophila)##NM_206539|DLK2|65989|delta-like 2 homolog (Drosophila)##NM_001146016|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_001146018|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_001146019|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_001146020|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_080604|TJAP1|93643|tight junction associated protein 1 (peripheral)	0.504693	CTCF.p2:-3:0.505
chr16	28376185	28376302	reg1012144.p2	9.932	+	TSC_hg19_v1_chr16_+_28303845 AY874862 NM_001024401	-72462	+	TSC_hg19_v1_chr16_-_28303389 AK091456 AX746995	-72865	-	TSC_hg19_v1_chr16_-_28223181 AB002368 NM_015171	-153068	-	DQ891632 DQ894822 AB527254 BC157849 BC071705 AK000739 AK293264 AY762099 TSC_hg19_v1_chr16_-_28415133 BC000533 BC001571	38798	-	AK055366 AK299421 AK303790 AK304500 TSC_hg19_v1_chr16_-_28415162 AK301233 AK301183 NM_001099661 BC107692 NM_001037808 NM_003752	38914	-	BC157842 AK292155 NM_001199142	61475	-	AY874862|SBK1|388228|SH3-binding domain kinase 1##NM_001024401|SBK1|388228|SH3-binding domain kinase 1##AB002368|XPO6|23214|exportin 6##NM_015171|XPO6|23214|exportin 6##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C	1.177693	CTCF.p2:19:0.652	CTCF.p2:-25:0.525
chr2	200569469	200569590	reg1010949.p2	9.932	+	AK291463 NM_015265	-233541	-	TSC_hg19_v1_chr2_-_200329812 AB209376 NM_001172517	-239709	-	AB028957 TSC_hg19_v1_chr2_-_200325214	-244288	-	AB568489 TSC_hg19_v1_chr2_-_200715872	146334	-	BC039445 TSC_hg19_v1_chr2_-_200715916	146384	-	TSC_hg19_v1_chr2_+_200775981 NM_153689	206448	+	AK291463|SATB2|23314|SATB homeobox 2##NM_015265|SATB2|23314|SATB homeobox 2##AB209376|SATB2|23314|SATB homeobox 2##NM_001172517|SATB2|23314|SATB homeobox 2##AB028957|SATB2|23314|SATB homeobox 2##AB568489|FONG|348751|uncharacterized LOC348751##BC039445|FONG|348751|uncharacterized LOC348751##NM_153689|C2orf69|205327|chromosome 2 open reading frame 69	0.887816	CTCF.p2:-9:0.888
chr3	129995142	129995288	reg1014229.p1	9.932	+	TSC_hg19_v1_chr3_-_129830331 BC071676	-164866	-	TSC_hg19_v1_chr3_-_129830276 BC083497	-164920	-	NM_001136152 BC127755	-194477	+	EU085556 NM_153264 AM906078	69203	+	AM774225 NM_001102608	283962	+	BC127105 BC127106 TSC_hg19_v1_chr3_-_130465651 AK314219 BC110318 BC009899 BC017332 BC057239 NM_014602	470388	-	NM_001136152|ALG1L2|644974|asparagine-linked glycosylation 1-like 2##EU085556|COL6A5|256076|collagen, type VI, alpha 5##NM_153264|COL6A5|256076|collagen, type VI, alpha 5##AM906078|COL6A5|256076|collagen, type VI, alpha 5##AM774225|COL6A6|131873|collagen, type VI, alpha 6##NM_001102608|COL6A6|131873|collagen, type VI, alpha 6##BC127105|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC127106|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AK314219|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC110318|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC009899|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC017332|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC057239|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_014602|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4	0.228305	CTCF.p2:-7:0.228
chr1	156111103	156111206	reg1010896.p1	9.931	+	TSC_hg19_v1_chr1_+_156084585 AY528714 AB527090 EU831758 EU831836 EU832167 EU832261 CU677029 CU678414 AY847595 AY847596 AY847597	-26510	+	TSC_hg19_v1_chr1_+_156084568 M13451	-26584	+	TSC_hg19_v1_chr1_+_156084553 BC003162 AK130179	-26603	+	NM_001193301 AY358531	8617	+	NM_001193300 NM_022367 AK296693 TSC_hg19_v1_chr1_+_156123375 AK091127 AK290353 AX746794 NM_001193302 AK315547 BX640891 BC020974	12200	+	TSC_hg19_v1_chr1_+_156163725 NM_014655	52584	+	AY528714|LMNA|4000|lamin A/C##EU831758|LMNA|4000|lamin A/C##EU831836|LMNA|4000|lamin A/C##EU832167|LMNA|4000|lamin A/C##EU832261|LMNA|4000|lamin A/C##AY847595|LMNA|4000|lamin A/C##AY847596|LMNA|4000|lamin A/C##AY847597|LMNA|4000|lamin A/C##M13451|LMNA|4000|lamin A/C##BC003162|LMNA|4000|lamin A/C##AK130179|LMNA|4000|lamin A/C##NM_001193301|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AY358531|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_001193300|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_022367|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK296693|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK091127|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK290353|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_001193302|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK315547|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##BX640891|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##BC020974|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_014655|SLC25A44|9673|solute carrier family 25, member 44	0.02607	
chr19	47120394	47120538	reg1013037.p1	9.931	+	AK310762 AK295927 TSC_hg19_v1_chr19_+_47105407	-15099	+	TSC_hg19_v1_chr19_+_47104586 J04046 BC005137	-15854	+	TSC_hg19_v1_chr19_+_47104543 NM_005184	-15946	+	BC017857 L29016 D29634 BC110342 BC075814 D25418 TSC_hg19_v1_chr19_-_47128333 AK315278 NM_000960	7857	-	AF493875 NM_033258 BC095514	17473	-	TSC_hg19_v1_chr19_-_47164311 BC034052 NM_145056	43904	-	AK310762|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##AK295927|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##J04046|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##BC005137|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##NM_005184|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##L29016|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##D29634|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC110342|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC075814|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##D25418|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##AK315278|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##NM_000960|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##AF493875|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##NM_033258|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##BC095514|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)##NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)	0.87549	CTCF.p2:-5:0.875
chr5	148998365	148998508	reg1011817.p1	9.931	+	AK300559 AK316002 BC041325 NM_001001669	-37352	+	TSC_hg19_v1_chr5_-_148931006 NM_001025105 NM_001892	-67430	-	TSC_hg19_v1_chr5_-_148930950 AK294942	-67470	-	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	111391	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	111440	+	AK123614 NM_001172699	153066	+	AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##NM_001025105|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001892|CSNK1A1|1452|casein kinase 1, alpha 1##AK294942|CSNK1A1|1452|casein kinase 1, alpha 1##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	0.895912	CTCF.p2:26:0.896
chr4	76498919	76499087	reg1002489.p2	9.930	+	AK074237 AK172776 BC117342 BC144003 BC144005 NM_001206981 NM_178497 AK300227 BC061701 HQ258050	-17730	+	NM_144721 TSC_hg19_v1_chr4_+_76439670 AK310575 AK056959 AK303658 AK308914 AK309187 AL833350 BX647579 AK313765	-59312	+	TSC_hg19_v1_chr4_-_76439614 AK091501 AX747022 BC031057 BC047393 NM_001008925 NM_001009922 NM_015436	-59389	-	U35146 BC017417 AK294866 AK312490 NM_003948	56642	-	TSC_hg19_v1_chr4_-_76598333 AB014560 AK291786 NM_012297	99313	-	AF053535 AF145284 TSC_hg19_v1_chr4_-_76598560	99557	-	AK074237|C4orf26|152816|chromosome 4 open reading frame 26##AK172776|C4orf26|152816|chromosome 4 open reading frame 26##BC117342|C4orf26|152816|chromosome 4 open reading frame 26##BC144003|C4orf26|152816|chromosome 4 open reading frame 26##BC144005|C4orf26|152816|chromosome 4 open reading frame 26##NM_001206981|C4orf26|152816|chromosome 4 open reading frame 26##NM_178497|C4orf26|152816|chromosome 4 open reading frame 26##AK300227|C4orf26|152816|chromosome 4 open reading frame 26##BC061701|C4orf26|152816|chromosome 4 open reading frame 26##HQ258050|C4orf26|152816|chromosome 4 open reading frame 26##NM_144721|THAP6|152815|THAP domain containing 6##AK310575|THAP6|152815|THAP domain containing 6##AK056959|THAP6|152815|THAP domain containing 6##AK303658|THAP6|152815|THAP domain containing 6##AK308914|THAP6|152815|THAP domain containing 6##AK309187|THAP6|152815|THAP domain containing 6##AL833350|THAP6|152815|THAP domain containing 6##BX647579|THAP6|152815|THAP domain containing 6##AK313765|THAP6|152815|THAP domain containing 6##AK091501|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC031057|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC047393|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001008925|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001009922|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_015436|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##U35146|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##BC017417|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##AK294866|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##AK312490|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##NM_003948|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	0.57635	CTCF.p2:29:0.576
chr1	158466295	158466440	reg1013013.p1	9.929	+	AB529285 NM_001004472	-16701	+	BC137323 BC137324 AB529282 NM_001004473	-31056	+	NM_001004476	-75712	-	NM_001005189	51527	-	NM_001160325	67026	-	NM_001004477	83321	-	NM_001004472|OR10R2|343406|olfactory receptor, family 10, subfamily R, member 2##BC137323|OR10K1|391109|olfactory receptor, family 10, subfamily K, member 1##BC137324|OR10K1|391109|olfactory receptor, family 10, subfamily K, member 1##NM_001004473|OR10K1|391109|olfactory receptor, family 10, subfamily K, member 1##NM_001004476|OR10K2|391107|olfactory receptor, family 10, subfamily K, member 2##NM_001005189|OR6Y1|391112|olfactory receptor, family 6, subfamily Y, member 1##NM_001160325|OR6P1|128366|olfactory receptor, family 6, subfamily P, member 1##NM_001004477|OR10X1|128367|olfactory receptor, family 10, subfamily X, member 1	0.232877	CTCF.p2:2:0.233
chr12	6807127	6807240	reg1011066.p1	9.929	+	BC053361 AK298962 TSC_hg19_v1_chr12_-_6798677 NM_001039920 NM_001135734	-8505	-	TSC_hg19_v1_chr12_-_6798532 NM_133476	-8641	-	TSC_hg19_v1_chr12_-_6798471 AK095734	-8716	-	AK095854 NM_001244015	2412	-	AK056295 NM_001244014 NM_153685	2803	-	NM_001164094 TSC_hg19_v1_chr12_+_6833211 NM_016319 AK128792 BC093015 AK021721 AF210052 NM_001164095	26018	+	BC053361|ZNF384|171017|zinc finger protein 384##AK298962|ZNF384|171017|zinc finger protein 384##NM_001039920|ZNF384|171017|zinc finger protein 384##NM_001135734|ZNF384|171017|zinc finger protein 384##NM_133476|ZNF384|171017|zinc finger protein 384##AK095734|ZNF384|171017|zinc finger protein 384##AK095854|C12orf53|196500|chromosome 12 open reading frame 53##NM_001244015|C12orf53|196500|chromosome 12 open reading frame 53##AK056295|C12orf53|196500|chromosome 12 open reading frame 53##NM_001244014|C12orf53|196500|chromosome 12 open reading frame 53##NM_153685|C12orf53|196500|chromosome 12 open reading frame 53##NM_001164094|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##NM_016319|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##AK128792|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##BC093015|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##AK021721|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##AF210052|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)##NM_001164095|COPS7A|50813|COP9 constitutive photomorphogenic homolog subunit 7A (Arabidopsis)	0.598494	CTCF.p2:10:0.598
chr14	106541817	106541934	reg1013869.p1	9.927	+	U49659 U32203 U32487 U32607 U32954 U33784 AF028116 AF267845 AJ437672 AJ437673 AJ437676 AJ437677 AY155561 AY155552 AY155553 AY155554 AY155555 AY155556 AY155558 AY155559 AY155560 DQ454893 DQ454501 DQ454556 AY003840 DQ454563 DQ454673 DQ454929 DQ454579 DQ454828 DQ523913 DQ454847 AF017458 FJ873972 FJ873986 HM995044 AJ487486 FJ694876 GQ232843 AF209886 AJ007327 AF209893 HQ392873 AF343406 AM279474 AM279478 AM279560 AM279563 AF308547 AF308555 HM773982 HM775023 AY515010 JN110874 L04323 HM774154 HM774400 HM774451 HM774458 HM774741 HM774744 HM774802 HM774806 HM775008 HM775009 HM775022 DQ097897 EU099249 AB067193 HM995129 AM183997 AY393237 AY393510 AY393524 AY193810 AY392846 AY392882 AY393110 AY393131 AY393136 AY393222 AY393234 AY393247 AY393248 AY393260 AY393499 AY393502 AY393529 AY393530 AY393534 AY393607 AY393631 AY393634 HM996282 HM996256 DQ100826 AF062290 DQ100689 DQ523985 EU620053 GU570225 HM995043 HM995045 HM995046 HM995047 HM995049 HM995050 HM995122 HM995127 HM995128 HM995148 HM995149 HM995150 HM995151 HM995152 HM995153 HM995154 HM995155 HM995208 HM995254 HM995311 HM995312 HM995363 HM995366 HM995694 HM995695 HM995698 HM995700 HM995703 HM995706 HM995708 HM995973 HM995974 HM995975 HM995976 HM995980 HM995983 HM995988 HM995989 HM995993 HM996202 HM996204 HM996241 HM996510 AB066887 AB067030 AB067098 AB067233 AF115112 AF115117 AF174060 AJ306682 AY376094 AY515000 DQ926131 DQ926568 DQ926621 EF178040 FJ195456 FJ195503 Z92895 Z92896 AB063690 AB063704 AB063736 AB066827 AB066831 AB066838 AB067161 AB067182 AB067304 AB067306 AB067324 AB289325 AB289327 AF021988 AF115130 AJ617574 AY640556 AY781858 AY971028 AY971058 AY971094 DQ005271 DQ100828 DQ100854 DQ205183 DQ535305 DQ768422 DQ926187 DQ926367 DQ926378 DQ926488 FJ385322 GU570224 HM152497 JN158499 M26435 U00547 U00560 U00561 Z18321 Z97032 DQ926181 DQ535306 DQ535339 EF178019 EF178022 FJ195500 FJ195523 L26892 HM995872 HM995895 HM995898 HM995899 AF062115 AF062177 AF062190 AF062211 AF062222 AF062223 AF062261 AF062263 AY392866 U43760 X65919 Z47216 Z47238 Z47240 BC067091 AF283666 BC075846 BC037361 Z14165 Z14166 Z14167 TSC_hg19_v1_chr14_-_106539571 AK097906 AK301334	-2536	-	AY035373 AY885209 AY885216 X61021 DQ454578 DQ523921 AF460677 AF460684 AF460701 AF460706 AF460802 DQ454428 GQ232803 GQ232912 GQ232954 GU552749 GQ232920 AY003818 AY003835 AY003844 AY003714 AY003809 DQ454647 DQ454454 DQ454471 DQ454492 DQ454915 GU552745 GU552756 GU552770 DQ454424 DQ454524 DQ454812 DQ454885 DQ454891 DQ454983 DQ454662 DQ454913 FJ840305 FJ840316 FJ873819 FJ873835 FJ873939 FJ873998 FJ874018 FJ874053 FJ874076 EU350415 AJ008237 AY003828 AJ487494 AJ487503 AY003805 DQ100698 EF175433 EF441757 EU814965 EU814969 DQ454482 EU099127 AM183996 HQ392896 AJ239383 AM279491 GQ903488 HM995750 AF103301 AF103037 AF103086 AF103146 AF165100 HM774111 AF103361 JN110905 HM775055 HM773993 FJ385329 HM774299 HM774454 HM774805 JN110797 JN111157 L04326 GQ504865 GQ504893 GQ504963 GQ504975 HM773970 HM774033 HM774184 HM774282 HM774312 HM774358 HM774362 HM774394 HM774602 HM774747 HM774807 HM774864 HM774872 HM774884 HM774902 HM774908 HM774914 HM774917 HM774979 HM774993 HM775020 HM775028 HQ703988 HQ704021 HQ704022 JN111201 DQ100741 HM775041 HM775050 S56604 AF103104 AF103221 AY866717 EF624097 EF624098 EF624099 EF624100 EF624101 EF624102 EF624103 EF624104 EF624105 EF624106 EF624107 EF624108 EF624109 EF624110 EF624111 EF624222 AJ300779 AJ300783 AJ300785 AY960861 DQ926366 AF001791 DQ100888 AF485461 AF485467 AF485475 AJ290433 AY376111 AF471523 AY423164 AY423165 AY423166 AY423167 AY423168 AY423196 AY423201 DQ100661 AJ556637 AY165857 AY885183 DQ109964 DQ109966 L37310 U00590 AF471185 AJ389182 AY866729 AY941943 DQ187554 DQ187558 DQ187672 GU570324 HM994886 HM995057 HM995131 HM995134 HM995135 HM995636 HM995660 HM995664 HM995773 HM995858 HM995860 HM996049 HM996147 HM996163 HM996317 HM996335 HM996371 HM996422 HM996433 HM996484 HM996538 U00584 DQ187677 DQ187708 DQ322751 DQ322797 DQ322802 DQ322804 DQ322860 DQ322861 DQ322862 DQ322863 DQ322864 DQ322865 DQ322866 DQ322867 DQ322894 DQ322895 DQ322896 DQ322897 DQ322905 DQ322906 DQ322909 DQ322910 DQ322922 DQ322957 DQ322958 DQ840698 DQ840723 DQ840725 DQ840754 DQ840755 DQ840757 DQ840759 DQ840761 DQ840762 DQ840763 DQ840764 DQ840765 DQ840767 DQ840768 DQ840779 DQ840854 DQ840860 DQ840862 DQ840867 DQ840872 DQ840875 DQ926106 HM996194 AF098360 AF115120 AF151699 AF151701 AF471405 AF471406 AF471470 AJ488539 AJ606116 AJ606117 AY530318 AY686908 DQ100752 DQ100787 DQ100790 DQ100827 DQ100850 DQ926039 DQ926040 DQ926061 DQ926074 DQ926108 DQ926127 DQ926145 DQ926175 DQ926381 DQ926443 DQ926559 DQ926611 EF177960 EF178018 EF178108 EU794412 FJ195533 FJ385315 HQ378333 HQ378408 L19913 X87893 X95740 Z18836 AB021510 AB021520 AB063665 AB063803 AB063812 AB063892 AB066987 AB067027 AB067099 AB067112 AB067123 AB067237 AB067268 AF021995 AF022001 AF052526 AF062119 AF062188 AF062241 AF109406 AF174118 AF408728 AF471169 AF471171 AF471172 AF471177 AF471179 AF471180 AF471181 AF471182 AF471184 AF471186 AF471189 AF471194 AF471195 AF471198 AF471199 AF471203 AF471204 AF471205 AF471208 AF471212 AF471214 AF471220 AF471386 AF471522 AF471527 AF471533 AF471543 AJ238036 AJ238038 AJ238040 AJ239359 AJ245208 AJ245317 AJ271601 AJ300781 AJ300786 AJ300796 AJ414013 AJ488543 AJ491910 AJ555273 AJ556638 AJ556640 AJ556645 AJ556649 AJ556658 AJ556659 AJ556660 AJ556664 AJ556667 AJ556668 AJ556669 AJ574777 AJ574779 AJ579141 AJ579162 AJ579198 AJ579216 AJ579217 AJ579233 AJ579234 AJ579239 AJ579269 AJ627231 AJ627236 AJ627237 AY033247 AY033256 AY033273 AY148344 AY281326 AY640478 AY685255 AY685317 AY955072 AY971017 AY971018 AY971074 AY971101 AY971123 DQ021409 DQ065716 DQ065724 DQ535273 DQ535337 DQ535344 DQ535374 DQ535415 DQ535435 DQ535457 DQ535480 DQ926153 DQ926159 DQ926221 DQ926410 DQ926544 DQ926553 DQ926573 DQ926614 EF177979 EF178025 EF178029 EF178039 EF178120 EF178121 EF178134 EF633799 EF633800 EU549723 EU794426 FJ385367 FJ481089 FJ492901 GQ856061 GQ903508 GQ903515 HM152524 HQ689704 JF806286 JF806288 JF806292 L39958 U00487 U00538 U03400 U76679 U85242 U85243 U96279 U96282 U96284 X62965 X99356 X99361 Z18822 Z95482 Z96960 Z96961 Z96962 Z96971 HM995657 AF283801 AJ249633 HM995748 HM995753 HM995770 HM995771 HM995772 HM995775 HM995873 Z14175 X69864 AY392917 AY393072 AY393151 AY393154 AY393160 X69863 X67908 Z14189 AF062138 AF062243 AF174030 AF174034 U79585 X59134 X65896 CU676308 BC041037 BC018747 BC062335 BC064496 TSC_hg19_v1_chr14_-_106518933 AK130614 AK097345 AK123975 AK126132 AK225676 BX640822	-23196	-	AF267814 AF267818 AY393025 M34025 DQ454568 FJ874017 FJ840306 FJ840308 FJ840341 FJ840342 FJ840347 FJ840348 FJ840351 FJ840353 FJ840354 FJ840356 FJ840361 FJ840364 FJ840365 FJ840368 FJ840373 FJ840378 FJ840401 FJ840402 FJ840404 FJ873822 FJ873825 FJ873827 FJ873829 FJ873831 FJ873832 FJ873834 FJ873841 FJ873843 FJ873845 FJ873851 FJ873852 FJ873854 FJ873856 FJ873879 FJ873880 FJ873882 FJ873889 FJ873891 FJ873893 FJ873896 FJ873900 FJ873905 FJ873906 FJ873907 FJ873908 FJ873917 FJ873919 FJ873920 FJ873927 FJ873937 FJ873944 FJ873960 FJ873973 FJ873980 FJ873983 FJ874001 FJ874004 FJ874006 FJ874007 FJ874011 FJ874012 FJ874016 FJ874021 FJ874022 FJ874032 FJ874033 FJ874035 FJ874041 FJ874060 FJ874071 FJ874092 HM116099 HM116103 HM116104 HM116108 HM116110 HM116111 HM116112 HM116124 HM116125 HM116126 HM116127 HM116132 HM116134 HM116142 HM116150 HM116151 HM116156 HM116157 HM116164 HM116171 HM116176 HM116183 HM116185 HM116186 HM116188 HM116194 HM116200 HM116203 HM116204 HM116207 HM116210 HM116211 HM116212 HM116215 HM116218 HM116224 GU552693 GQ232960 GQ232962 GQ232978 AJ008188 S75886 AJ487496 AY003819 AY994082 EU090242 EU667603 JF810259 AY393312 AY392883 AY392887 AY392891 AY392897 AY392900 AY392903 AY393023 AY393026 AY393027 AY393028 AY393029 AY393030 AY393031 AY393032 AY393033 AY393034 AY393035 AY393036 AY393037 AY393038 AY393040 AY393041 AY393042 AY393043 AY393044 AY393045 AY393046 AY393048 AY393049 AY393050 AY393051 AY393276 AY393277 AY393278 AY393283 AY393285 AY393288 AY393289 AY393290 AY393292 AY393294 AY393298 AY393299 AY393303 AY393304 AY393307 AY393310 AY393311 AY393382 AY393386 AY393390 AY393391 AY393392 AY393393 AY393406 AY393413 AY393416 AY393417 AY393418 AY393419 AY393421 AY393423 AY393435 AY393440 AY393452 AY393554 AY393555 AY393557 AY393558 AY393559 AY393564 AY393565 EU099064 EU099181 EU099246 DQ100785 JN110964 AY955064 JN110468 JN110515 JN110517 JN110539 JN110572 JN110594 JN110907 JN110984 JN110994 JN111158 JN111166 JN111205 AY062324 AM279571 AY866601 AY866658 AM279525 AM279573 AY866680 DQ100676 DQ100927 DQ100946 AM279595 AM279596 AM279599 AM279600 DQ100868 DQ926119 DQ926440 DQ926554 DQ926566 HM995527 HM995209 HM995210 HM995212 HM995214 HM995215 HM995376 HM995377 HM995380 HM995398 HM995401 HM995473 HM995528 HM995531 HM995597 HM995599 HM995814 HM995819 AB063834 AB066852 AB066861 AB066862 AB066864 AB066865 AB066866 AB066868 AB066869 AB066870 AB066871 AB066873 AB066874 AB066878 AB067185 AB067189 AB067221 AB067222 AB067223 AB067226 AB067228 AB067229 AB067231 AB067232 AB363096 AB363107 AB374193 AB374196 AB374197 AB374204 AF035018 AF062155 AF062255 AF129754 AF174046 AF174061 AF174070 AF174071 AF455551 AF460966 AY055482 AY345923 AY866550 AY866584 AY866603 AY866625 AY866961 AY941941 DQ205143 DQ490734 DQ490735 DQ490736 DQ923046 DQ926138 DQ926180 DQ926226 DQ926362 DQ926376 DQ926412 DQ926456 DQ926482 DQ926490 DQ926499 DQ926558 DQ926576 DQ926582 DQ926586 DQ926588 DQ926592 DQ926605 DQ926606 DQ926610 DQ926650 FR820874 GU570276 GU570278 GU570279 GU570280 HM152514 HQ378331 HQ378364 HQ378373 S73953 U00545 U00552 U00555 X64147 M90808 AY393141 AY393143 AY393144 AY393146 AY393147 AY393149 AY393150 X69861 AF062130 AF062268 AF062282 AY172958 S67984 X81695 Z47235 Z47237 Z47243 AK301335 TSC_hg19_v1_chr14_-_106494595 AK057617 BC092449	-47493	-	AF028100 AF460781 AF460830 DQ523918 DQ454686 DQ454784 AY003751 GQ232926 GQ232842 DQ454536 DQ454572 DQ454577 DQ523874 GU552698 DQ100996 AY003834 AY003866 DQ454881 DQ454918 GQ232935 GU552747 AY003780 DQ454841 DQ523891 FJ694882 FJ839966 FJ839976 FJ839978 FJ839985 FJ839992 FJ840024 FJ840027 FJ840030 FJ840039 FJ840068 FJ840074 FJ840076 FJ840077 FJ840081 FJ840084 FJ840087 FJ840121 FJ840122 FJ840152 FJ840211 FJ840345 FJ840372 FJ840374 FJ840382 FJ840393 FJ873873 FJ873898 FJ873903 FJ873918 FJ873976 FJ873981 FJ874020 FJ874039 FJ874070 AJ008190 AY003813 AY003814 EF175404 EF091903 EF091904 EF175384 EU350416 EU350417 AF035027 EU099275 EU099133 AM183981 AM183982 AM183983 HQ704031 HM774241 L04343 U63211 AF103184 FJ385385 HM774328 HM774349 HM774514 HM774642 HM774682 HM774840 HM774998 HQ704030 HQ704032 HQ704033 HQ704034 AF032360 HM774930 S56184 L03385 Y15773 AJ306670 AY376085 DQ926534 HM994910 HM995374 HM995381 AB063655 AB063669 AB063676 AB063796 AB063804 AB063927 AB066885 AB066886 AB066890 AB066980 AB066983 AB067006 AB067010 AB067016 AB067028 AB067069 AB067083 AB067103 AB067234 AB067266 AB363180 AF174058 AF174062 AJ306669 AJ309318 AM279602 AY376074 AY376080 AY944687 DQ100830 DQ100852 DQ100869 DQ100889 DQ100935 DQ926042 DQ926211 DQ926238 DQ926293 DQ926337 DQ926445 DQ926545 DQ926589 DQ926594 DQ926641 EF177963 EF177965 EU117415 FJ385303 FJ385304 FJ385360 FJ490203 GU570287 GU570291 GU570293 GU570294 HM994902 HM994970 HM994971 HM994973 HM994974 HM994975 HM994976 HM994999 HM995000 HM995001 HM995002 HM995003 HM995005 HM995006 HM995007 HM995008 HM995009 HM995010 HM995011 HM995229 HM995234 HM995240 HM995300 HM995301 HM995302 HM995303 HM995305 HM995350 HM995352 HM995354 HM995372 HM995378 HM995379 HM995382 HM995383 HM995384 HM995385 HM995386 HM995423 HM995430 HM995431 HM995449 HM995453 HM995454 HM995455 HM995458 HM995459 HM995507 HM995509 HM995510 HM995511 HM995575 HM995632 HM995835 HM995836 HM995838 HM995839 HM995840 HM995841 HM995954 HM996284 HM996494 HQ378378 U07985 Z18834 X98899 AB021529 AB021539 AF035796 AF471223 AF471224 AF471226 AF471227 AF471231 AF471235 AF471238 AF471239 AJ239353 AJ245321 AJ579149 AJ579153 AJ579156 AJ579215 AJ579229 AJ617571 AY379733 AY941939 D83676 D83677 DQ225095 DQ535264 DQ535301 DQ535363 DQ535409 DQ535438 DQ535483 EF633755 EF633756 EF633757 EF633758 EF633787 EF633789 EF633790 EF633816 EU835550 EU835551 GU570285 GU570286 HM152494 U00488 U00506 U00546 U00577 U00588 X62968 X62969 X63080 X64239 X73605 X79166 X99360 Z18318 Z33899 Z33901 Z14176 Z14171 AY994080 EU883655 DQ234395 DQ234396 DQ234397 DQ234398 DQ234399 DQ234401 EU883644 EU883645 EU883646 EU883647 EU883648 EU883649 EU883650 EU883651 EU883652 EU883653 EU883654 EU883656 EU883657 EU883658 EU883659 L23565 X53613 Z80840 CU675389 CU676902 BC021276 BC006402 TSC_hg19_v1_chr14_-_106552810 AK097367 AK123546 AK128565 AK128625 AK129508 BX640627	10686	-	DQ454787 U64487 AF460704 AF460740 AF460807 DQ454554 AL389978 FJ385400 DQ454728 DQ454993 DQ454902 GQ232943 GU552699 AY003824 AY003849 DQ454431 EF566904 AY003777 DQ454493 DQ454848 GU552714 GU552717 DQ454498 DQ454515 DQ454965 DQ523862 EF407823 DQ454754 DQ454849 DQ454990 FJ840311 FJ840313 FJ840317 FJ840329 FJ840349 FJ873842 FJ873857 FJ873909 FJ873912 FJ873925 FJ874051 FJ874081 FJ874083 FJ874089 HM116118 AY003786 EU433870 EF175391 EF175399 EF175431 EF175439 EF441746 EU433865 EU667604 EU099143 EU099237 EU099244 EU099063 EU099194 EU099113 EU099200 AM183985 AM183986 EU099292 HQ392870 AF103124 DQ100718 AF103028 AF103040 AF103322 HM774410 L07309 L07310 L07312 JN110741 L03824 L03825 L04325 HM774027 HM774097 HM774142 HM774318 HM774446 HM774453 HM774557 HM774576 HM774604 HM774628 HM774645 HM774671 HM774698 HM774809 HM774847 HM774858 HM775011 HM775058 AF165102 HM775038 HM775039 HM775042 AF082199 EU146392 EU146393 EU146395 AY376083 AY376084 AF103217 AY485363 DQ100667 DQ926397 DQ926487 AF062294 DQ187521 DQ187649 DQ523968 DQ523986 DQ524059 DQ926170 DQ926613 GU570296 GU570301 HM995316 HM995318 HM995367 HM995592 HM995658 HM995661 HM995663 HM995671 HM995696 HM995697 HM995699 HM995792 HM995793 HM995795 HM995911 HM995912 HM995913 HM995914 HM995915 HM995916 HM995917 HM995918 HM996161 HM996278 DQ187668 DQ322752 DQ322795 DQ322799 DQ322834 DQ322835 DQ322836 DQ322837 DQ322838 DQ322839 DQ322840 DQ322841 DQ322842 DQ322843 DQ322847 DQ322848 DQ322849 DQ322850 DQ322851 DQ322852 DQ322853 DQ322854 DQ322907 DQ322908 DQ322924 DQ322985 DQ322986 DQ322987 DQ840668 DQ840696 DQ840724 DQ840738 DQ840869 DQ840885 DQ840898 DQ840902 DQ926246 DQ926249 DQ926313 DQ926315 AB063717 AB063810 AB066882 AB066982 AB067264 AB067265 AB363130 AB363133 AB363178 AB363229 AB363239 AF234248 AJ306671 AY033239 AY033240 AY376073 AY376086 AY376088 AY422530 AY530313 AY640532 AY846271 AY971070 AY971132 AY986395 AY986402 DQ065641 DQ065715 DQ100950 DQ926227 DQ926469 DQ926491 DQ926596 EF178046 EU549734 FJ195526 GU570302 HQ378386 Z46761 AB021522 AB063668 AB363134 AB363177 AB363231 AF021996 AF035794 AF115122 AF119800 AF119801 AF119802 AF119803 AF119804 AF151704 AF174095 AF471243 AF471244 AF471245 AF471248 AF471251 AF471252 AF471253 AJ389186 AJ414018 AJ555260 AJ579155 AJ579190 AJ579223 AJ579232 AJ579237 AJ627246 AY530315 AY685254 AY971117 DQ065650 DQ100894 DQ100911 DQ205140 DQ205152 DQ212511 DQ431495 DQ535391 DQ535412 DQ535423 DQ535428 DQ840729 DQ840811 DQ926123 DQ926333 DQ926625 EF178050 EF633766 EF633767 EF633768 EF633798 FJ492898 GU570300 GU570349 S77136 U64493 U64507 U85230 U96395 X62972 X63081 X64241 X99352 X99366 Z96969 Z96970 Z97036 HM995655 HM995787 HM995788 HM995789 HM995870 L33033 X67907 AY392930 AY393153 AY393157 AY393162 L08089 AF062269 L06912 S72664 X65897 X81736 X81744 X81754 Z11959 BC090940 X61013 X61014 BC073758 AK097320 AK125582 AK130539 AK130586 AK130844 AK301403 TSC_hg19_v1_chr14_-_106573761	31680	-	GU552766 DQ454945 DQ454680 DQ454800 DQ100736 HQ392877 AY062313 JN110910 JN111168 L03821 L04324 FJ385334 FJ385335 HM774019 HM774079 HM774175 HM774429 HM774436 HM774460 HM774566 HM774691 HM774780 HM774984 AF165105 AY062308 DQ100831 AJ300807 AB063700 AY423173 AY062309 DQ100870 GU570344 HM994897 HM994907 HM994915 HM995019 HM995419 HM995424 HM995733 HM995761 HM995921 HM995935 HM995953 HM996087 HM996247 HM996409 DQ840731 DQ840896 AB374202 AM279603 AY866783 DQ431491 EF178033 FJ385392 GU570335 AB021538 AB063673 AB066975 AB067002 AB067017 AB067076 AB067261 AB363102 AB363150 AF062210 AF098364 AF174056 AF174100 AF174120 AF301484 AF455549 AF471257 AF471259 AF471261 AF471262 AF471264 AF471363 AF471478 AF471487 AF471497 AJ007956 AJ389180 AJ399809 AJ413989 AJ555276 AJ556639 AJ579273 AM040537 AY268370 AY466509 AY685302 AY685304 AY921574 AY921575 AY927662 AY941906 D83675 DQ065617 DQ065728 DQ535267 DQ535281 DQ535298 DQ535334 DQ535408 DQ535485 DQ926436 DQ926504 DQ926507 DQ926513 DQ926550 EF178020 GU570303 GU570338 GU570343 GU570348 L33984 S65535 Z33898 AY670714 HM995884 AF062141 L03683 L38431 X65894 X81740 M18515 BC053984 TSC_hg19_v1_chr14_-_106586668	44626	-	BC067091|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF283666|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC075846|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC037361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097906|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC041037|IGHM|3507|immunoglobulin heavy constant mu##BC018747|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC062335|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC064496|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097345|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK123975|IGH@|3492|immunoglobulin heavy locus##BX640822|IGH@|3492|immunoglobulin heavy locus##AK301335|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC092449|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC021276|IGHD|3495|immunoglobulin heavy constant delta##BC006402|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097367|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123546|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128565|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128625|IGHD|3495|immunoglobulin heavy constant delta##AK129508|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640627|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AL389978|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BC090940|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073758|IGHM|3507|immunoglobulin heavy constant mu##AK097320|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125582|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130539|IGHM|3507|immunoglobulin heavy constant mu##AK130586|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130844|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301403|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31	0.96924	CTCF.p2:18:0.969
chr8	54500743	54500856	reg1011464.p1	9.927	+	BC099912 AK310407 AY168006 NM_000912 AY466378	-336587	-	BC069117 BC107101 NM_005285	-648332	+	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	-873786	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	254880	-	AK022345 TSC_hg19_v1_chr8_-_54755834	255028	-	AF113222 TSC_hg19_v1_chr8_-_54755840 NM_015941 NM_213619 AK303229	255053	-	BC099912|OPRK1|4986|opioid receptor, kappa 1##AK310407|OPRK1|4986|opioid receptor, kappa 1##AY168006|OPRK1|4986|opioid receptor, kappa 1##NM_000912|OPRK1|4986|opioid receptor, kappa 1##AY466378|OPRK1|4986|opioid receptor, kappa 1##BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF113222|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_015941|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213619|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK303229|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H	0.899972	CTCF.p2:0:0.900
chr9	18213378	18213485	reg1010898.p2	9.927	+	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	-634335	+	TSC_hg19_v1_chr9_+_17134988 AK303973 AK308837 BX647069 AK098502 NM_001114395 NM_017738	-1078414	+	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	-1342665	-	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	260657	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	260752	+	BC033489 AK292245 AK057474 NM_153707	819788	-	AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##AK303973|CNTLN|54875|centlein, centrosomal protein##AK308837|CNTLN|54875|centlein, centrosomal protein##BX647069|CNTLN|54875|centlein, centrosomal protein##AK098502|CNTLN|54875|centlein, centrosomal protein##NM_001114395|CNTLN|54875|centlein, centrosomal protein##NM_017738|CNTLN|54875|centlein, centrosomal protein##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1##BC033489|FAM154A|158297|family with sequence similarity 154, member A##AK292245|FAM154A|158297|family with sequence similarity 154, member A##AK057474|FAM154A|158297|family with sequence similarity 154, member A##NM_153707|FAM154A|158297|family with sequence similarity 154, member A	0.930537	CTCF.p2:0:0.931
chr10	72575523	72575649	reg1013463.p1	9.926	+	BC060774 BC139728 BC137543 BC137544 BC144692 BC144694 BC144695 AK057382 NM_152710	-30453	-	AB462932 AF358666 AJ345098 NM_080722 NM_139155	-143029	+	BC063043 TSC_hg19_v1_chr10_-_72362518 FJ555237 NM_001083116 NM_005041	-213060	-	TSC_hg19_v1_chr10_+_72575685 NM_003901 BC052991 BC051238 BC068061	83	+	TSC_hg19_v1_chr10_+_72575751 AB033078 AJ011304	169	+	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	72716	-	BC060774|C10orf27|219793|chromosome 10 open reading frame 27##BC139728|C10orf27|219793|chromosome 10 open reading frame 27##BC137543|C10orf27|219793|chromosome 10 open reading frame 27##BC137544|C10orf27|219793|chromosome 10 open reading frame 27##BC144692|C10orf27|219793|chromosome 10 open reading frame 27##BC144694|C10orf27|219793|chromosome 10 open reading frame 27##BC144695|C10orf27|219793|chromosome 10 open reading frame 27##AK057382|C10orf27|219793|chromosome 10 open reading frame 27##NM_152710|C10orf27|219793|chromosome 10 open reading frame 27##AF358666|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##AJ345098|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_080722|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_139155|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##BC063043|PRF1|5551|perforin 1 (pore forming protein)##FJ555237|PRF1|5551|perforin 1 (pore forming protein)##NM_001083116|PRF1|5551|perforin 1 (pore forming protein)##NM_005041|PRF1|5551|perforin 1 (pore forming protein)##NM_003901|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC052991|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC051238|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC068061|SGPL1|8879|sphingosine-1-phosphate lyase 1##AB033078|SGPL1|8879|sphingosine-1-phosphate lyase 1##AJ011304|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha	0.121019	
chr4	177198837	177198939	reg1010633.p1	9.926	+	AY057053 CU688084 AK096441 BC065710 BX647857 NM_080874	-8573	-	CU692400 TSC_hg19_v1_chr4_-_177116722 BC021731 BC029428 AY040204 NM_144644	-82121	-	TSC_hg19_v1_chr4_+_176987148 BC118549 BC118627 AK098748 DQ426895 DQ426896	-211719	+	TSC_hg19_v1_chr4_+_177241098 NM_021928	42165	+	TSC_hg19_v1_chr4_+_177241122 AK026302 AL136660 AY359044 BC043490 BC053883 BC047290 CU690386 EU831652 EU831735	42280	+	TSC_hg19_v1_chr4_-_177241652 AK096223	42743	-	AY057053|ASB5|140458|ankyrin repeat and SOCS box containing 5##AK096441|ASB5|140458|ankyrin repeat and SOCS box containing 5##BC065710|ASB5|140458|ankyrin repeat and SOCS box containing 5##BX647857|ASB5|140458|ankyrin repeat and SOCS box containing 5##NM_080874|ASB5|140458|ankyrin repeat and SOCS box containing 5##BC021731|SPATA4|132851|spermatogenesis associated 4##BC029428|SPATA4|132851|spermatogenesis associated 4##AY040204|SPATA4|132851|spermatogenesis associated 4##NM_144644|SPATA4|132851|spermatogenesis associated 4##BC118549|WDR17|116966|WD repeat domain 17##BC118627|WDR17|116966|WD repeat domain 17##AK098748|WDR17|116966|WD repeat domain 17##DQ426895|WDR17|116966|WD repeat domain 17##DQ426896|WDR17|116966|WD repeat domain 17##NM_021928|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AK026302|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AL136660|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AY359044|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC043490|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC053883|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC047290|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831652|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831735|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)	0.0	
chr17	27940542	27940671	reg1012924.p1	9.925	+	TSC_hg19_v1_chr17_+_27920483 NM_152345	-20104	+	TSC_hg19_v1_chr17_-_27916646 AK294785 BC048196	-23951	-	TSC_hg19_v1_chr17_-_27916606 BC067358 NM_001085454 NM_014030	-24000	-	AK096431 NM_032854	7786	-	BC028205 TSC_hg19_v1_chr17_-_27949878 AL833952	9245	-	TSC_hg19_v1_chr17_-_28088446 BC011636	147852	-	NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B##AK294785|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC048196|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC067358|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_001085454|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_014030|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AK096431|CORO6|84940|coronin 6##NM_032854|CORO6|84940|coronin 6##BC028205|CORO6|84940|coronin 6##AL833952|CORO6|84940|coronin 6##BC011636|SSH2|85464|slingshot homolog 2 (Drosophila)	0.96246	CTCF.p2:1:0.962
chrX	41039592	41039701	reg1011587.p1	9.925	+	TSC_hg19_v1_chrX_+_40944880 NM_001039590 NM_001039591	-94774	+	TSC_hg19_v1_chrX_-_40595139 AK308871	-444517	-	TSC_hg19_v1_chrX_-_40594999 AK293070	-444666	-	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	153004	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	153811	+	AK304661 TSC_hg19_v1_chrX_+_41193866 AK127902	154219	+	NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked##NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked##AK308871|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	0.951548	CTCF.p2:-1:0.952
chr17	9195598	9195753	reg1014490.p1	9.924	+	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	-270708	+	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	-326694	-	AY725853 AF128881 NM_014308	-379859	-	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	283456	-	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	283531	-	NM_001080556 NM_145054 AK074435 AB065281 BC025392 AK094847 AK315679 CU692990	284302	+	NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8##NM_001080556|WDR16|146845|WD repeat domain 16##NM_145054|WDR16|146845|WD repeat domain 16##AK074435|WDR16|146845|WD repeat domain 16##AB065281|WDR16|146845|WD repeat domain 16##BC025392|WDR16|146845|WD repeat domain 16##AK094847|WDR16|146845|WD repeat domain 16##AK315679|WDR16|146845|WD repeat domain 16	0.0	
chr10	46983775	46983915	reg1009511.p2	9.923	+	TSC_hg19_v1_chr10_-_46970597 AK131036 AK293632 NM_031912 NM_181519	-13245	-	BC139914 AK290186 TSC_hg19_v1_chr10_-_46970538	-13335	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-342824	-	BC011672 NM_014696	9700	+	AY649985 AY649986 NM_005972	99688	+	AB590156 CU687256 DQ893430 DQ896775 M81844 AK296573 AK300139 AK300158 BC021910 BC004376 NM_001098845 AK296976 Z36830 BC073755 NM_001040084 AK298761	190174	-	AK131036|SYT15|83849|synaptotagmin XV##AK293632|SYT15|83849|synaptotagmin XV##NM_031912|SYT15|83849|synaptotagmin XV##NM_181519|SYT15|83849|synaptotagmin XV##BC139914|SYT15|83849|synaptotagmin XV##AK290186|SYT15|83849|synaptotagmin XV##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC011672|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##NM_014696|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##AY649985|PPYR1|5540|pancreatic polypeptide receptor 1##AY649986|PPYR1|5540|pancreatic polypeptide receptor 1##NM_005972|PPYR1|5540|pancreatic polypeptide receptor 1##DQ893430|ANXA8L2|244|annexin A8-like 2##DQ896775|ANXA8|653145|annexin A8##M81844|ANXA8|653145|annexin A8##AK296573|ANXA8|653145|annexin A8##AK300139|ANXA8|653145|annexin A8##AK300158|ANXA8|653145|annexin A8##BC004376|ANXA8|653145|annexin A8##NM_001098845|ANXA8L1|728113|annexin A8-like 1##Z36830|ANXA8|653145|annexin A8##BC073755|ANXA8|653145|annexin A8##NM_001040084|ANXA8|653145|annexin A8##AK298761|ANXA8|653145|annexin A8	0.898562	CTCF.p2:-21:0.399	CTCF.p2:35:0.500
chr10	73369070	73369195	reg1012663.p1	9.923	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	-212394	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-290086	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-290107	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	110460	-	AK074172 NM_001168390	128448	-	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	164174	-	BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54	0.330657	CTCF.p2:-7:0.331
chr11	57259293	57259400	reg1008059.p1	9.923	+	TSC_hg19_v1_chr11_+_57228149 BC113673 BC117276 BC143818 AF532858 AX751514 AY250221 DQ864979 NM_178570	-31114	+	NM_017611	-64294	-	TSC_hg19_v1_chr11_-_57194592 AK075552 AK298028 AK315839 NM_199329	-64754	-	AF045584 TSC_hg19_v1_chr11_-_57282334 BC001639 NM_001198810	22990	-	TSC_hg19_v1_chr11_-_57283184 AB103033 NM_003627	23826	-	AK289751 BC032133 TSC_hg19_v1_chr11_-_57298210 AF150089 NM_012456	38859	-	BC113673|RTN4RL2|349667|reticulon 4 receptor-like 2##BC117276|RTN4RL2|349667|reticulon 4 receptor-like 2##BC143818|RTN4RL2|349667|reticulon 4 receptor-like 2##AF532858|RTN4RL2|349667|reticulon 4 receptor-like 2##AX751514|RTN4RL2|349667|reticulon 4 receptor-like 2##AY250221|RTN4RL2|349667|reticulon 4 receptor-like 2##DQ864979|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_178570|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_017611|SLC43A3|29015|solute carrier family 43, member 3##AK075552|SLC43A3|29015|solute carrier family 43, member 3##AK298028|SLC43A3|29015|solute carrier family 43, member 3##AK315839|SLC43A3|29015|solute carrier family 43, member 3##NM_199329|SLC43A3|29015|solute carrier family 43, member 3##AF045584|SLC43A1|8501|solute carrier family 43, member 1##BC001639|SLC43A1|8501|solute carrier family 43, member 1##NM_001198810|SLC43A1|8501|solute carrier family 43, member 1##AB103033|SLC43A1|8501|solute carrier family 43, member 1##NM_003627|SLC43A1|8501|solute carrier family 43, member 1##AK289751|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##BC032133|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##AF150089|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##NM_012456|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)	0.978643	CTCF.p2:3:0.969
chr1	197893762	197893885	reg1012132.p1	9.923	+	TSC_hg19_v1_chr1_+_197886502 AY273889 NM_020204	-7316	+	AJ296272 NM_001014434 AJ277915	-12184	+	BC130608 BC130634 NM_001024594 HQ258066 BC038214	-22092	+	TSC_hg19_v1_chr1_+_198126162 NM_133494 AK313411	232231	+	NM_133262 NM_133326	616251	-	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	714350	+	AY273889|LHX9|56956|LIM homeobox 9##NM_020204|LHX9|56956|LIM homeobox 9##AJ296272|LHX9|56956|LIM homeobox 9##NM_001014434|LHX9|56956|LIM homeobox 9##AJ277915|LHX9|56956|LIM homeobox 9##BC130608|C1orf53|388722|chromosome 1 open reading frame 53##BC130634|C1orf53|388722|chromosome 1 open reading frame 53##NM_001024594|C1orf53|388722|chromosome 1 open reading frame 53##HQ258066|C1orf53|388722|chromosome 1 open reading frame 53##BC038214|C1orf53|388722|chromosome 1 open reading frame 53##NM_133494|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##AK313411|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	0.946641	CTCF.p2:16:0.947
chr17	34399999	34400135	reg1011153.p2	9.923	+	AB000221 NM_002988 Y13710 BC096124 BC096125 BC096126 BC096127 BC069700 AB590849 AB451458 CR407660	-8397	+	AB590848 U67128 U85767 BC093970 BC143310 NM_005064 NM_145898 U58913	-55099	-	NM_032965 TSC_hg19_v1_chr17_-_34329160	-70945	-	D63785 AB463487 BC171831 BC171891 BC071834 M25315 D00044 M23452 X03754 NM_002983	17378	-	AY766446 AY766448 NM_002984 BC107433 M23502 BC104226 BC104227 M25316 X53683 BC027961 X16166 AY312578 CR542119 M57503	31200	+	BC033670 AK301823 BC071680 AK225985 AK292257 NM_001001417	103883	-	AB000221|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##NM_002988|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##Y13710|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096124|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096125|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096126|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096127|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC069700|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##AB451458|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##CR407660|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##U67128|CCL23|6368|chemokine (C-C motif) ligand 23##U85767|CCL23|6368|chemokine (C-C motif) ligand 23##BC093970|CCL23|6368|chemokine (C-C motif) ligand 23##BC143310|CCL23|6368|chemokine (C-C motif) ligand 23##NM_005064|CCL23|6368|chemokine (C-C motif) ligand 23##NM_145898|CCL23|6368|chemokine (C-C motif) ligand 23##U58913|CCL23|6368|chemokine (C-C motif) ligand 23##NM_032965|CCL15|6359|chemokine (C-C motif) ligand 15##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BC171831|CCL3|6348|chemokine (C-C motif) ligand 3##BC171891|CCL3|6348|chemokine (C-C motif) ligand 3##BC071834|CCL3|6348|chemokine (C-C motif) ligand 3##M25315|CCL3|6348|chemokine (C-C motif) ligand 3##D00044|CCL3|6348|chemokine (C-C motif) ligand 3##M23452|CCL3|6348|chemokine (C-C motif) ligand 3##X03754|CCL3|6348|chemokine (C-C motif) ligand 3##NM_002983|CCL3|6348|chemokine (C-C motif) ligand 3##AY766446|CCL4|6351|chemokine (C-C motif) ligand 4##AY766448|CCL4|6351|chemokine (C-C motif) ligand 4##NM_002984|CCL4|6351|chemokine (C-C motif) ligand 4##BC107433|CCL4|6351|chemokine (C-C motif) ligand 4##M23502|CCL4|6351|chemokine (C-C motif) ligand 4##BC104226|CCL4|6351|chemokine (C-C motif) ligand 4##BC104227|CCL4|6351|chemokine (C-C motif) ligand 4##M25316|CCL4|6351|chemokine (C-C motif) ligand 4##X53683|CCL4|6351|chemokine (C-C motif) ligand 4##BC027961|CCL4|6351|chemokine (C-C motif) ligand 4##X16166|CCL4|6351|chemokine (C-C motif) ligand 4##AY312578|CCL4|6351|chemokine (C-C motif) ligand 4##CR542119|CCL4|6351|chemokine (C-C motif) ligand 4##M57503|CCL4|6351|chemokine (C-C motif) ligand 4##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK292257|TBC1D3B|414059|TBC1 domain family, member 3B##NM_001001417|TBC1D3B|414059|TBC1 domain family, member 3B	0.997952	CTCF.p2:6:0.998
chr8	56731483	56731621	reg1014264.p1	9.923	+	AK054705 TSC_hg19_v1_chr8_+_56686187	-45369	+	TSC_hg19_v1_chr8_+_56686028 AY028423 AK314693 BX648548 AF432215	-45532	+	AK308247 AK056932 NM_152417 BC020835 BC071636	-45655	-	TSC_hg19_v1_chr8_+_56792383 M16038 NM_001111097 NM_002350 BC126456 BC126458	60813	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	60843	+	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	60968	+	AY028423|TGS1|96764|trimethylguanosine synthase 1##AK314693|TGS1|96764|trimethylguanosine synthase 1##BX648548|TGS1|96764|trimethylguanosine synthase 1##AF432215|TGS1|96764|trimethylguanosine synthase 1##AK308247|TMEM68|137695|transmembrane protein 68##AK056932|TMEM68|137695|transmembrane protein 68##NM_152417|TMEM68|137695|transmembrane protein 68##BC020835|TMEM68|137695|transmembrane protein 68##BC071636|TMEM68|137695|transmembrane protein 68##M16038|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_001111097|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_002350|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126456|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126458|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog	0.0	
chr8	110359237	110359375	reg1012227.p1	9.922	+	TSC_hg19_v1_chr8_+_110346575 NM_001193557 NM_020189 AK095651 AK316560 AK000487 AK290752 BC051878 BC007870	-12713	+	AK301278 TSC_hg19_v1_chr8_-_110346317 BC000967 AK027897 BC043406 AK315006 BC031258 NM_032869 AF283301	-12935	-	AF283302 AK311583 AF521133 NM_001128211 AK307663	-17172	-	AY219181 NM_177531 BC093096 AK128617	15423	+	TSC_hg19_v1_chr8_+_110551942 NM_198120 AK290651 BC017729	192679	+	NM_004215 BC005249 BC022506 AK308950 AB007619 AF006265 AY515724	193104	+	NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK301278|NUDCD1|84955|NudC domain containing 1##BC000967|NUDCD1|84955|NudC domain containing 1##AK027897|NUDCD1|84955|NudC domain containing 1##BC043406|NUDCD1|84955|NudC domain containing 1##AK315006|NUDCD1|84955|NudC domain containing 1##BC031258|NUDCD1|84955|NudC domain containing 1##NM_032869|NUDCD1|84955|NudC domain containing 1##AF283301|NUDCD1|84955|NudC domain containing 1##AF283302|NUDCD1|84955|NudC domain containing 1##AK311583|NUDCD1|84955|NudC domain containing 1##AF521133|NUDCD1|84955|NudC domain containing 1##NM_001128211|NUDCD1|84955|NudC domain containing 1##AK307663|NUDCD1|84955|NudC domain containing 1##AY219181|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##NM_177531|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##BC093096|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##NM_198120|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK290651|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC017729|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##NM_004215|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC005249|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC022506|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK308950|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AB007619|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AF006265|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AY515724|EBAG9|9166|estrogen receptor binding site associated, antigen, 9	0.988107	CTCF.p2:-21:0.988
chr8	87883402	87883513	reg1012148.p2	9.922	+	AK093121 AX747937 BC117326 BC117328 NM_173538	-4784	+	BC150601 AF272900 NM_019098 DQ426865	-127545	-	AK292912 BC007017 BC008385 TSC_hg19_v1_chr8_+_87526694 BC066597 BC036242 AB014536 AF077226	-356746	+	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	1002802	-	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	1456289	-	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	2886573	+	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3##AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3##NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3##AK292912|CPNE3|8895|copine III##BC007017|CPNE3|8895|copine III##BC008385|CPNE3|8895|copine III##BC066597|CPNE3|8895|copine III##BC036242|CPNE3|8895|copine III##AB014536|CPNE3|8895|copine III##AF077226|CPNE3|8895|copine III##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2	0.665843	CTCF.p2:5:0.666
chr7	51228839	51228962	reg1009262.p1	9.921	+	TSC_hg19_v1_chr7_-_50861150 NM_001001555	-367746	-	D86962 TSC_hg19_v1_chr7_-_50860699	-368211	-	AF000017 AB000731 AF001534 NM_001001549 NM_005311 U34355	-428867	-	AB385366 TSC_hg19_v1_chr7_-_51384416 BC136441 BC144099	155480	-	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	155586	-	NM_182595	1874448	+	NM_001001555|GRB10|2887|growth factor receptor-bound protein 10##D86962|GRB10|2887|growth factor receptor-bound protein 10##AF000017|GRB10|2887|growth factor receptor-bound protein 10##AB000731|GRB10|2887|growth factor receptor-bound protein 10##AF001534|GRB10|2887|growth factor receptor-bound protein 10##NM_001001549|GRB10|2887|growth factor receptor-bound protein 10##NM_005311|GRB10|2887|growth factor receptor-bound protein 10##U34355|GRB10|2887|growth factor receptor-bound protein 10##BC136441|COBL|23242|cordon-bleu homolog (mouse)##BC144099|COBL|23242|cordon-bleu homolog (mouse)##BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12	0.955032	CTCF.p2:13:0.955
chr19	55813273	55813409	reg1011169.p1	9.920	+	TSC_hg19_v1_chr19_+_55795772 AY458602 HQ830199 AY505124 AL834275	-17503	+	AF479827 NM_032430	-17808	+	AF217996 NM_001130106 NM_012267	-21603	-	TSC_hg19_v1_chr19_+_55813404 AK124999	72	+	BC016681 TSC_hg19_v1_chr19_+_55813629	274	+	BC171904 BC171893 BC171901 TSC_hg19_v1_chr19_-_55836705 NM_001085488	23348	-	AY458602|BRSK1|84446|BR serine/threonine kinase 1##HQ830199|BRSK1|84446|BR serine/threonine kinase 1##AY505124|BRSK1|84446|BR serine/threonine kinase 1##AL834275|BRSK1|84446|BR serine/threonine kinase 1##AF479827|BRSK1|84446|BR serine/threonine kinase 1##NM_032430|BRSK1|84446|BR serine/threonine kinase 1##AF217996|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##NM_001130106|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##NM_012267|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##AK124999|BRSK1|84446|BR serine/threonine kinase 1##BC016681|BRSK1|84446|BR serine/threonine kinase 1##BC171904|TMEM150B|284417|transmembrane protein 150B##BC171893|TMEM150B|284417|transmembrane protein 150B##BC171901|TMEM150B|284417|transmembrane protein 150B##NM_001085488|TMEM150B|284417|transmembrane protein 150B	0.997505	CTCF.p2:18:0.998
chr3	81351272	81351359	reg1008123.p1	9.920	+	NM_002941	-1534257	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-2282728	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-2684330	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	459382	-	TSC_hg19_v1_chr3_-_81810798 AK312245	459483	-	TSC_hg19_v1_chr3_-_81810802 AK297939	459490	-	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.998689	CTCF.p2:-9:0.999
chr5	147558933	147559064	reg1011800.p1	9.920	+	NM_001001325	-9703	+	DQ149927 DQ149928 DQ149929 NM_001127698 NM_001127699 NM_006846 AK299455 AK307588 AK309753 AK301660 AK307648 AJ228139 AB463250	-115428	+	AY358656 AK289403 BC021680 NM_206966	-272916	-	GQ504704 NM_001195290 NM_205841 GQ504705 BC032003	23372	+	EF108324 EF426754 BC128163 BC128164 NM_001040129	89400	+	AK311570 AF268198 NM_032566 AY359072 BC109385 BC110067	133009	+	NM_001001325|SPINK14|408187|serine peptidase inhibitor, Kazal type 14 (putative)##DQ149927|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##DQ149928|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##DQ149929|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##NM_001127698|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##NM_001127699|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##NM_006846|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK299455|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK307588|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK309753|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK301660|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK307648|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AJ228139|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AY358656|C5orf46|389336|chromosome 5 open reading frame 46##AK289403|C5orf46|389336|chromosome 5 open reading frame 46##BC021680|C5orf46|389336|chromosome 5 open reading frame 46##NM_206966|C5orf46|389336|chromosome 5 open reading frame 46##GQ504704|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##NM_001195290|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##NM_205841|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##GQ504705|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##BC032003|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##AF268198|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##NM_032566|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##AY359072|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##BC109385|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##BC110067|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)	0.824355	CTCF.p2:-8:0.824
chr6	167403267	167403361	reg1010299.p2	9.920	+	AK315467 TSC_hg19_v1_chr6_-_167370038 BC036282 NM_003730	-33257	-	TSC_hg19_v1_chr6_-_167370030 BC001660 BC001819 BC039713 BC051912 AJ419865 AJ419866 AJ419867 U85625	-33304	-	DQ884402 TSC_hg19_v1_chr6_-_167369732	-33612	-	TSC_hg19_v1_chr6_+_167412884 NM_007045 NM_194429 Y18046 AK294950 AK289846 BX647686 AK312791 BC011902 AB590215 CU680104 DQ893037 DQ896278 AJ420472	9539	+	NM_004367	121980	+	NM_031409 U68031 U68030	132935	+	AK315467|RNASET2|8635|ribonuclease T2##BC036282|RNASET2|8635|ribonuclease T2##NM_003730|RNASET2|8635|ribonuclease T2##BC001660|RNASET2|8635|ribonuclease T2##BC001819|RNASET2|8635|ribonuclease T2##BC039713|RNASET2|8635|ribonuclease T2##BC051912|RNASET2|8635|ribonuclease T2##AJ419865|RNASET2|8635|ribonuclease T2##AJ419866|RNASET2|8635|ribonuclease T2##AJ419867|RNASET2|8635|ribonuclease T2##U85625|RNASET2|8635|ribonuclease T2##NM_007045|FGFR1OP|11116|FGFR1 oncogene partner##NM_194429|FGFR1OP|11116|FGFR1 oncogene partner##Y18046|FGFR1OP|11116|FGFR1 oncogene partner##AK294950|FGFR1OP|11116|FGFR1 oncogene partner##AK289846|FGFR1OP|11116|FGFR1 oncogene partner##AK312791|FGFR1OP|11116|FGFR1 oncogene partner##BC011902|FGFR1OP|11116|FGFR1 oncogene partner##DQ893037|FGFR1OP|11116|FGFR1 oncogene partner##DQ896278|FGFR1OP|11116|FGFR1 oncogene partner##AJ420472|FGFR1OP|11116|FGFR1 oncogene partner##NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6	0.961932	CTCF.p2:8:0.962
chr17	53605030	53605143	reg1010648.p1	9.919	+	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	-105831	-	TSC_hg19_v1_chr17_+_53344967 AK295726 AK074289	-260100	+	AK290043 TSC_hg19_v1_chr17_+_53343204	-261899	+	BC010128 AK001832 NM_018286	195063	-	AK095175 NM_001099640	204376	-	NM_021213 TSC_hg19_v1_chr17_+_53828339 AF087857 AF151638	223289	+	CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##AK295726|HLF|3131|hepatic leukemia factor##AK074289|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100##NM_021213|PCTP|58488|phosphatidylcholine transfer protein##AF087857|PCTP|58488|phosphatidylcholine transfer protein##AF151638|PCTP|58488|phosphatidylcholine transfer protein	0.652531	CTCF.p2:-5:0.653
chr19	18786713	18786826	reg1010444.p2	9.918	+	TSC_hg19_v1_chr19_+_18747837 AK001940 AK222656 AK294074 NM_018316 BC026319	-38935	+	TSC_hg19_v1_chr19_+_18723679 NM_012109 AK309384 AF186264 BC010446 EU831798 EU831875	-63053	+	TSC_hg19_v1_chr19_-_18717634 AF073515 NM_004750	-69123	-	TSC_hg19_v1_chr19_+_18794453 AK024089 AY040323 NM_001098482 NM_015321	7655	+	AY360171 TSC_hg19_v1_chr19_+_18794489 BC028050 AB527764 CU688378 DQ893310 DQ894228 AB014516	7754	+	U75488 TSC_hg19_v1_chr19_-_18888853	102021	-	AK001940|KLHL26|55295|kelch-like 26 (Drosophila)##AK222656|KLHL26|55295|kelch-like 26 (Drosophila)##AK294074|KLHL26|55295|kelch-like 26 (Drosophila)##NM_018316|KLHL26|55295|kelch-like 26 (Drosophila)##BC026319|KLHL26|55295|kelch-like 26 (Drosophila)##NM_012109|TMEM59L|25789|transmembrane protein 59-like##AK309384|TMEM59L|25789|transmembrane protein 59-like##AF186264|TMEM59L|25789|transmembrane protein 59-like##BC010446|TMEM59L|25789|transmembrane protein 59-like##EU831798|TMEM59L|25789|transmembrane protein 59-like##EU831875|TMEM59L|25789|transmembrane protein 59-like##AF073515|CRLF1|9244|cytokine receptor-like factor 1##NM_004750|CRLF1|9244|cytokine receptor-like factor 1##AK024089|CRTC1|23373|CREB regulated transcription coactivator 1##AY040323|CRTC1|23373|CREB regulated transcription coactivator 1##NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1##NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1##AY360171|CRTC1|23373|CREB regulated transcription coactivator 1##BC028050|CRTC1|23373|CREB regulated transcription coactivator 1##DQ893310|CRTC1|23373|CREB regulated transcription coactivator 1##DQ894228|CRTC1|23373|CREB regulated transcription coactivator 1##AB014516|CRTC1|23373|CREB regulated transcription coactivator 1	0.998496	CTCF.p2:3:0.998
chr16	58039265	58039391	reg1014038.p1	9.917	+	TSC_hg19_v1_chr16_+_58035310 AK293220 AK298473 AK303121 BC010099 AK301494 BC004415 BC007774 BC006291 BC021554	-3996	+	NM_001195302 NM_001204911 NM_024598 TSC_hg19_v1_chr16_+_58035304 AK023216	-4037	+	AB037809 NM_020807	-5567	-	NM_002428	19953	+	BC036495 BC055428 TSC_hg19_v1_chr16_+_58059491	20154	+	TSC_hg19_v1_chr16_-_58163283 AK027099 AK297819 BC005152 AF087845 AF093680	123904	-	AK293220|C16orf57|79650|chromosome 16 open reading frame 57##AK298473|C16orf57|79650|chromosome 16 open reading frame 57##AK303121|C16orf57|79650|chromosome 16 open reading frame 57##BC010099|C16orf57|79650|chromosome 16 open reading frame 57##AK301494|C16orf57|79650|chromosome 16 open reading frame 57##BC004415|C16orf57|79650|chromosome 16 open reading frame 57##BC007774|C16orf57|79650|chromosome 16 open reading frame 57##BC006291|C16orf57|79650|chromosome 16 open reading frame 57##BC021554|C16orf57|79650|chromosome 16 open reading frame 57##NM_001195302|C16orf57|79650|chromosome 16 open reading frame 57##NM_001204911|C16orf57|79650|chromosome 16 open reading frame 57##NM_024598|C16orf57|79650|chromosome 16 open reading frame 57##AK023216|C16orf57|79650|chromosome 16 open reading frame 57##AB037809|ZNF319|57567|zinc finger protein 319##NM_020807|ZNF319|57567|zinc finger protein 319##NM_002428|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##BC036495|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##BC055428|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##AK027099|C16orf80|29105|chromosome 16 open reading frame 80##AK297819|C16orf80|29105|chromosome 16 open reading frame 80##BC005152|C16orf80|29105|chromosome 16 open reading frame 80##AF087845|C16orf80|29105|chromosome 16 open reading frame 80##AF093680|C16orf80|29105|chromosome 16 open reading frame 80	0.830069	CTCF.p2:16:0.830
chr17_ctg5_hap1	1387140	1387272	reg1014581.p1	9.917	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.962456	CTCF.p2:5:0.962
chr11	85306480	85306607	reg1011614.p1	9.916	+	U32376 AB209252 AK295094 NM_001364	-672093	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	-672311	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	-1278162	-	CR749820 NM_001142699	31770	-	NM_001193537 NM_001193538 NM_018480 TSC_hg19_v1_chr11_+_85339636 AK298189 BC017574 BC107900 AF220193 AF246240 AK291150 BC038933 BC012065	33103	+	NM_001244735 NM_032273 AL136941 AK312081 BC007875	52460	+	U32376|DLG2|1740|discs, large homolog 2 (Drosophila)##AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##CR749820|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142699|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001193537|TMEM126B|55863|transmembrane protein 126B##NM_001193538|TMEM126B|55863|transmembrane protein 126B##NM_018480|TMEM126B|55863|transmembrane protein 126B##AK298189|TMEM126B|55863|transmembrane protein 126B##BC017574|TMEM126B|55863|transmembrane protein 126B##BC107900|TMEM126B|55863|transmembrane protein 126B##AF220193|TMEM126B|55863|transmembrane protein 126B##AF246240|TMEM126B|55863|transmembrane protein 126B##AK291150|TMEM126B|55863|transmembrane protein 126B##BC038933|TMEM126B|55863|transmembrane protein 126B##BC012065|TMEM126B|55863|transmembrane protein 126B##NM_001244735|TMEM126A|84233|transmembrane protein 126A##NM_032273|TMEM126A|84233|transmembrane protein 126A##AL136941|TMEM126A|84233|transmembrane protein 126A##AK312081|TMEM126A|84233|transmembrane protein 126A##BC007875|TMEM126A|84233|transmembrane protein 126A	0.938573	CTCF.p2:-25:0.939
chr14	69378437	69378561	reg1011481.p1	9.916	+	TSC_hg19_v1_chr14_-_69354901 BX641076	-23560	-	NM_001244701 AB528867	-115515	-	NM_001244698 NM_004926	-117869	-	BX248020 AK299362 TSC_hg19_v1_chr14_-_69444987	66487	-	BT007207 AB590251 DQ890778 DQ895768 EU716325 FJ410030 TSC_hg19_v1_chr14_-_69445830 M95178 BC015766	67331	-	TSC_hg19_v1_chr14_-_69445953 DQ496098 X15804	67461	-	BX641076|ACTN1|87|actinin, alpha 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BX248020|ACTN1|87|actinin, alpha 1##AK299362|ACTN1|87|actinin, alpha 1##BT007207|ACTN1|87|actinin, alpha 1##DQ890778|ACTN1|87|actinin, alpha 1##DQ895768|ACTN1|87|actinin, alpha 1##EU716325|ACTN1|87|actinin, alpha 1##FJ410030|ACTN1|87|actinin, alpha 1##M95178|ACTN1|87|actinin, alpha 1##BC015766|ACTN1|87|actinin, alpha 1##DQ496098|ACTN1|87|actinin, alpha 1##X15804|ACTN1|87|actinin, alpha 1	0.999019	CTCF.p2:-4:0.999
chr12	123953464	123953581	reg1010431.p1	9.915	+	BC093671 BC111955 NM_180699	-9137	+	NM_022717 AK290127 TSC_hg19_v1_chr12_+_123942685 BC047678 BC020829 U44799 BC054034	-10819	+	TSC_hg19_v1_chr12_-_123921232 AK056934 NM_145058	-32281	-	BC089444 TSC_hg19_v1_chr12_-_124018263 NM_178314	64652	-	TSC_hg19_v1_chr12_-_124018501 AK096697	64975	-	TSC_hg19_v1_chr12_-_124068867 AK125282	115353	-	BC093671|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC111955|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##NM_180699|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##NM_022717|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##AK290127|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC047678|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##U44799|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC054034|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##AK056934|RILPL2|196383|Rab interacting lysosomal protein-like 2##NM_145058|RILPL2|196383|Rab interacting lysosomal protein-like 2##BC089444|RILPL1|353116|Rab interacting lysosomal protein-like 1##NM_178314|RILPL1|353116|Rab interacting lysosomal protein-like 1##AK096697|RILPL1|353116|Rab interacting lysosomal protein-like 1	0.0	
chr4	6000199	6000331	reg1010637.p1	9.915	+	DQ206871 TSC_hg19_v1_chr4_-_5894794 NM_001014809	-105521	-	BC009987 TSC_hg19_v1_chr4_-_5891940	-108337	-	TSC_hg19_v1_chr4_-_5890302 NM_001313	-109956	-	TSC_hg19_v1_chr4_-_6202277 AK294356 AK307983 AK056126 AM412307 AM412308 AM412309 AM412310 BC026343 NM_001099433 NM_144720	202019	-	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	271303	+	Y18064 TSC_hg19_v1_chr4_+_6271588	271329	+	DQ206871|CRMP1|1400|collapsin response mediator protein 1##NM_001014809|CRMP1|1400|collapsin response mediator protein 1##BC009987|CRMP1|1400|collapsin response mediator protein 1##NM_001313|CRMP1|1400|collapsin response mediator protein 1##AK294356|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK307983|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK056126|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412307|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412308|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412309|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412310|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##BC026343|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_001099433|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_144720|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)	0.991877	CTCF.p2:-30:0.992
chr6	15491741	15491851	reg1010473.p1	9.915	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-242683	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-242895	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-245384	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	171381	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	171494	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	637506	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.815988	CTCF.p2:7:0.816
chr1	144697640	144697752	reg1012018.p1	9.914	+	AY894562 AY894567 AY894568 AY894572 AY894574 NM_001037675	-82738	+	TSC_hg19_v1_chr1_+_144593695 BX538005 AK308678	-103998	+	TSC_hg19_v1_chr1_-_144521169 AK090660 AX746564	-176467	-	CU687328 TSC_hg19_v1_chr1_-_144931874 BC078660	234115	-	BC132717 TSC_hg19_v1_chr1_-_144932057 BC004860 NM_001002811	234351	-	AL832024 AB042556 AL831815 TSC_hg19_v1_chr1_-_144994880	297165	-	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894567|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894568|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894572|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894574|NBPF9|400818|neuroblastoma breakpoint family, member 9##NM_001037675|NBPF9|400818|neuroblastoma breakpoint family, member 9##BX538005|NBPF10|100132406|neuroblastoma breakpoint family, member 10##AK090660|FAM91A2|57234|family with sequence similarity 91, member A2##BC078660|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC132717|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC004860|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001002811|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AL832024|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AL831815|PDE4DIP|9659|phosphodiesterase 4D interacting protein	0.0	
chr2	192386466	192386584	reg1011968.p1	9.914	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-276427	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-370218	-	TSC_hg19_v1_chr2_-_192015965 NM_003151	-370566	-	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	156337	+	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	325213	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	325446	-	NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##NM_003151|STAT4|6775|signal transducer and activator of transcription 4##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response	0.307779	CTCF.p2:1:0.308
chr1	12139756	12139888	reg1010991.p2	9.913	+	M83554 NM_001243 BC136400 BC171762 S75768	-16278	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-60252	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-60288	+	D86042 BC063482 NM_152942 BC073839 BC141804	46194	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	87239	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	87289	+	M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.992645	CTCF.p2:7:0.993
chr11	86581150	86581270	reg1011373.p1	9.912	+	NM_007173 TSC_hg19_v1_chr11_+_86511583 AK316508 AK075362 AK315562 AK304301 AK304054 BC063022 AL136914 BC001278 AF015287 AF193611 AY359033	-69658	+	TSC_hg19_v1_chr11_-_86383659 AK300974 NM_001161586	-197545	-	X79440 TSC_hg19_v1_chr11_-_86383470 NM_006680 AK313695	-197768	-	TSC_hg19_v1_chr11_-_86666094 AY462097	84897	-	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	85178	-	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	167768	+	NM_007173|PRSS23|11098|protease, serine, 23##AK075362|PRSS23|11098|protease, serine, 23##AK315562|PRSS23|11098|protease, serine, 23##AK304301|PRSS23|11098|protease, serine, 23##AK304054|PRSS23|11098|protease, serine, 23##AL136914|PRSS23|11098|protease, serine, 23##BC001278|PRSS23|11098|protease, serine, 23##AF015287|PRSS23|11098|protease, serine, 23##AF193611|PRSS23|11098|protease, serine, 23##AY359033|PRSS23|11098|protease, serine, 23##AK300974|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001161586|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##X79440|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_006680|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK313695|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AY462097|FZD4|8322|frizzled family receptor 4##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135	0.998362	CTCF.p2:-13:0.998
chr6	132990902	132991051	reg1010811.p1	9.912	+	AY180374 NM_138327 BC101825 BC112194	-23823	-	AY703480 NM_001033080 AB464299	-45562	-	AY702304 BC067461 BC067462 BC067463 NM_014626	-51757	-	U39664 BC096268 AJ132099 BC096265 BC096266 BC096267 TSC_hg19_v1_chr6_-_133035195 AK290425 AK314265 NM_004666	44212	-	BC064641 AB435062 AB435063 AB435064 AB435065 NM_001242350 HQ258282 HQ258449 AB026705 AJ132100 D89974 NM_004665 AK290908 AK298719 BC126145 BC126147 BC144064	88025	-	AK292125 NM_078488 TSC_hg19_v1_chr6_-_133084603	93619	-	AY180374|TAAR1|134864|trace amine associated receptor 1##NM_138327|TAAR1|134864|trace amine associated receptor 1##BC101825|TAAR1|134864|trace amine associated receptor 1##BC112194|TAAR1|134864|trace amine associated receptor 1##AY703480|TAAR2|9287|trace amine associated receptor 2##NM_001033080|TAAR2|9287|trace amine associated receptor 2##AY702304|TAAR2|9287|trace amine associated receptor 2##BC067461|TAAR2|9287|trace amine associated receptor 2##BC067462|TAAR2|9287|trace amine associated receptor 2##BC067463|TAAR2|9287|trace amine associated receptor 2##NM_014626|TAAR2|9287|trace amine associated receptor 2##U39664|VNN1|8876|vanin 1##BC096268|VNN1|8876|vanin 1##AJ132099|VNN1|8876|vanin 1##BC096265|VNN1|8876|vanin 1##BC096266|VNN1|8876|vanin 1##BC096267|VNN1|8876|vanin 1##AK290425|VNN1|8876|vanin 1##AK314265|VNN1|8876|vanin 1##NM_004666|VNN1|8876|vanin 1##BC064641|VNN2|8875|vanin 2##AB435062|VNN2|8875|vanin 2##AB435063|VNN2|8875|vanin 2##AB435064|VNN2|8875|vanin 2##AB435065|VNN2|8875|vanin 2##NM_001242350|VNN2|8875|vanin 2##HQ258282|VNN2|8875|vanin 2##HQ258449|VNN2|8875|vanin 2##AB026705|VNN2|8875|vanin 2##AJ132100|VNN2|8875|vanin 2##D89974|VNN2|8875|vanin 2##NM_004665|VNN2|8875|vanin 2##AK290908|VNN2|8875|vanin 2##AK298719|VNN2|8875|vanin 2##BC126145|VNN2|8875|vanin 2##BC126147|VNN2|8875|vanin 2##BC144064|VNN2|8875|vanin 2##AK292125|VNN2|8875|vanin 2##NM_078488|VNN2|8875|vanin 2	0.363099	CTCF.p2:-25:0.363
chr15	30913721	30913867	reg1014424.p1	9.911	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-228082	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-799171	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-799452	-	TSC_hg19_v1_chr15_+_30918372 BC071990	4592	+	BC105788 NM_001039841	5084	+	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	282280	+	BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1	0.994334	CTCF.p2:-6:0.994
chr20	49411345	49411477	reg1014139.p1	9.911	+	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	-63342	+	TSC_hg19_v1_chr20_-_49308074 AK124347	-103334	-	AK056792 NM_080829	-157986	-	AF361220 NM_001010974 NM_017843 NM_198799 TSC_hg19_v1_chr20_+_49411542 AK000502 BC038381 BC047337 AJ511266 BC056883	107	+	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	136312	-	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	163652	-	BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##AF361220|BCAS4|55653|breast carcinoma amplified sequence 4##NM_001010974|BCAS4|55653|breast carcinoma amplified sequence 4##NM_017843|BCAS4|55653|breast carcinoma amplified sequence 4##NM_198799|BCAS4|55653|breast carcinoma amplified sequence 4##AK000502|BCAS4|55653|breast carcinoma amplified sequence 4##BC038381|BCAS4|55653|breast carcinoma amplified sequence 4##BC047337|BCAS4|55653|breast carcinoma amplified sequence 4##AJ511266|BCAS4|55653|breast carcinoma amplified sequence 4##BC056883|BCAS4|55653|breast carcinoma amplified sequence 4##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit	1.32587	CTCF.p2:25:0.973	CTCF.p2:-46:0.353
chr13	98452697	98452799	reg1010384.p2	9.910	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	-366046	+	TSC_hg19_v1_chr13_+_98086350 AK315139 NM_021033 BC041333	-366311	+	TSC_hg19_v1_chr13_+_97999294 AF339832	-453454	+	NM_002271 BC045640	153189	+	TSC_hg19_v1_chr13_+_98628928 BX648222 AK303494 AK225286 BC001497 BC019309 DQ893033 EU176755 U72761	176084	+	TSC_hg19_v1_chr13_+_98795412 NM_001001715 NM_005766	342673	+	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family##AK315139|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_021033|RAP2A|5911|RAP2A, member of RAS oncogene family##BC041333|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_002271|IPO5|3843|importin 5##BC045640|IPO5|3843|importin 5##BX648222|IPO5|3843|importin 5##AK303494|IPO5|3843|importin 5##AK225286|IPO5|3843|importin 5##BC001497|IPO5|3843|importin 5##BC019309|IPO5|3843|importin 5##DQ893033|IPO5|3843|importin 5##EU176755|IPO5|3843|importin 5##U72761|IPO5|3843|importin 5##NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	0.998912	CTCF.p2:-8:0.999
chr19	33616904	33617038	reg1012058.p1	9.910	+	BC006108 NM_018025	-45186	+	AF423421 AJ347750 DQ892111 DQ895305 TSC_hg19_v1_chr19_-_33555795 AF268032 AK098246 AK300775 AK315105 BC036447 NM_033103	-61181	-	AK309396 NM_152266 AK128668 BC020247 BC010170 BC003535	-153801	+	BC031227 NM_173479 AB527326	6065	+	TSC_hg19_v1_chr19_+_33685155 AK129963	68197	+	AB009462 NM_002333 BC007408 TSC_hg19_v1_chr19_+_33685676 EU176387 AK296536	68632	+	BC006108|GPATCH1|55094|G patch domain containing 1##NM_018025|GPATCH1|55094|G patch domain containing 1##AF423421|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AJ347750|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ892111|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ895305|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AF268032|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK098246|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK300775|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK315105|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##BC036447|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##NM_033103|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##NM_152266|C19orf40|91442|chromosome 19 open reading frame 40##AK128668|C19orf40|91442|chromosome 19 open reading frame 40##BC020247|C19orf40|91442|chromosome 19 open reading frame 40##BC010170|C19orf40|91442|chromosome 19 open reading frame 40##BC003535|C19orf40|91442|chromosome 19 open reading frame 40##BC031227|WDR88|126248|WD repeat domain 88##NM_173479|WDR88|126248|WD repeat domain 88##AK129963|LRP3|4037|low density lipoprotein receptor-related protein 3##AB009462|LRP3|4037|low density lipoprotein receptor-related protein 3##NM_002333|LRP3|4037|low density lipoprotein receptor-related protein 3##BC007408|LRP3|4037|low density lipoprotein receptor-related protein 3##EU176387|LRP3|4037|low density lipoprotein receptor-related protein 3##AK296536|LRP3|4037|low density lipoprotein receptor-related protein 3	0.999329	CTCF.p2:-8:0.999
chr4	47935951	47936074	reg1011827.p1	9.910	+	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	-19417	-	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	-95922	-	TSC_hg19_v1_chr4_+_47708352 D28417	-227658	+	M84741 NM_001142564 S42457	47477	-	AK292021 NM_000087	78948	-	X64802 TSC_hg19_v1_chr4_-_48018662	82625	-	AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1##S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1##AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1	0.419282	CTCF.p2:14:0.419
chr7	15365809	15365918	reg1013007.p1	9.910	+	BC105005 BC143632 BC143633 NM_004080 NM_145695	-484849	-	NM_001163148	-1334814	-	NM_001163149 X87175	-1334995	-	BC108676 AK131284 NM_001004320	235743	-	AB463880 CR536553 CU677801 L36328 TSC_hg19_v1_chr7_-_15726203 BC017021 AK313386	360266	-	TSC_hg19_v1_chr7_-_15726309 AK309472 X82629 NM_005924	360428	-	BC105005|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143632|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143633|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_004080|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_145695|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_001163148|ETV1|2115|ets variant 1##NM_001163149|ETV1|2115|ets variant 1##X87175|ETV1|2115|ets variant 1##BC108676|AGMO|392636|alkylglycerol monooxygenase##AK131284|AGMO|392636|alkylglycerol monooxygenase##NM_001004320|AGMO|392636|alkylglycerol monooxygenase##CR536553|MEOX2|4223|mesenchyme homeobox 2##L36328|MEOX2|4223|mesenchyme homeobox 2##BC017021|MEOX2|4223|mesenchyme homeobox 2##AK313386|MEOX2|4223|mesenchyme homeobox 2##AK309472|MEOX2|4223|mesenchyme homeobox 2##X82629|MEOX2|4223|mesenchyme homeobox 2##NM_005924|MEOX2|4223|mesenchyme homeobox 2	0.988523	CTCF.p2:-11:0.989
chrX	115009417	115009565	reg1009716.p1	9.910	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-181623	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-212449	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-213885	+	BC003645 TSC_hg19_v1_chrX_-_115085443	75948	-	AK313927 NM_000686 X87723 U16957	292504	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	558276	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.784099	CTCF.p2:-56:0.784
chrX	141891951	141892063	reg1012771.p2	9.910	+	AF151378 AF196482 AF116194 AK313591 BC013318 NM_016249	-598942	-	NM_005462 AF056334 BC025969	-900336	+	NM_177456	-909556	+	BC130503 BC130505 NM_001009613 HQ258561 DQ336126 DQ336127	221744	+	DQ336128 DQ336129 BC062750 NM_001009609	713255	-	AK315044 NM_001184750	830311	-	AF151378|MAGEC2|51438|melanoma antigen family C, 2##AF196482|MAGEC2|51438|melanoma antigen family C, 2##AF116194|MAGEC2|51438|melanoma antigen family C, 2##AK313591|MAGEC2|51438|melanoma antigen family C, 2##BC013318|MAGEC2|51438|melanoma antigen family C, 2##NM_016249|MAGEC2|51438|melanoma antigen family C, 2##NM_005462|MAGEC1|9947|melanoma antigen family C, 1##AF056334|MAGEC1|9947|melanoma antigen family C, 1##BC025969|MAGEC1|9947|melanoma antigen family C, 1##NM_177456|MAGEC3|139081|melanoma antigen family C, 3##BC130503|SPANXN4|441525|SPANX family, member N4##BC130505|SPANXN4|441525|SPANX family, member N4##NM_001009613|SPANXN4|441525|SPANX family, member N4##HQ258561|SPANXN4|441525|SPANX family, member N4##DQ336126|SPANXN4|441525|SPANX family, member N4##DQ336127|SPANXN4|441525|SPANX family, member N4##DQ336128|SPANXN3|139067|SPANX family, member N3##DQ336129|SPANXN3|139067|SPANX family, member N3##BC062750|SPANXN3|139067|SPANX family, member N3##NM_001009609|SPANXN3|139067|SPANX family, member N3##AK315044|SLITRK4|139065|SLIT and NTRK-like family, member 4##NM_001184750|SLITRK4|139065|SLIT and NTRK-like family, member 4	0.975523	CTCF.p2:-2:0.976
chr12	49947399	49947532	reg1012026.p1	9.909	+	TSC_hg19_v1_chr12_+_49932842 AB033108 NM_012284 BC144254 BC150602 AB022696 AB384589	-14445	+	TSC_hg19_v1_chr12_+_49761253 BC017767 AL833614 BC048299 AK292334 AK023202 BX648916 BC032441	-186071	+	TSC_hg19_v1_chr12_+_49760679 AK095582 NM_023071	-186776	+	AY336730 NM_001012300	12756	-	TSC_hg19_v1_chr12_-_49961916 AK123187 BC011794 NM_006337 BX538079 AK308581	14453	-	AM393365 AL136748 BC035621 AK302702 AK093242 AX748009 NM_032130	51880	-	AB033108|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##NM_012284|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC144254|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC150602|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AB022696|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2##AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2##BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK095582|SPATS2|65244|spermatogenesis associated, serine-rich 2##NM_023071|SPATS2|65244|spermatogenesis associated, serine-rich 2##AY336730|MCRS1|10445|microspherule protein 1##NM_001012300|MCRS1|10445|microspherule protein 1##BC011794|MCRS1|10445|microspherule protein 1##NM_006337|MCRS1|10445|microspherule protein 1##BX538079|MCRS1|10445|microspherule protein 1##AM393365|FAM186B|84070|family with sequence similarity 186, member B##AL136748|FAM186B|84070|family with sequence similarity 186, member B##BC035621|FAM186B|84070|family with sequence similarity 186, member B##AK302702|FAM186B|84070|family with sequence similarity 186, member B##AK093242|FAM186B|84070|family with sequence similarity 186, member B##NM_032130|FAM186B|84070|family with sequence similarity 186, member B	0.771465	CTCF.p2:36:0.578
chr14	94085675	94085783	reg1011052.p2	9.909	+	AY161004 NM_182971 BC101125 BC101126	-272181	+	AK125327 NM_020818	-286165	+	TSC_hg19_v1_chr14_-_93799376 AK291422 BC141850 BX248762 NM_001002860 NM_018167 BC047071	-286325	-	AY225516 AY225517 NM_178013	169036	-	NM_001207071 NM_138344 AK093387 AX748092	299519	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	307979	+	AY161004|COX8C|341947|cytochrome c oxidase subunit VIIIC##NM_182971|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101125|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101126|COX8C|341947|cytochrome c oxidase subunit VIIIC##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)##AK291422|BTBD7|55727|BTB (POZ) domain containing 7##BC141850|BTBD7|55727|BTB (POZ) domain containing 7##BX248762|BTBD7|55727|BTB (POZ) domain containing 7##NM_001002860|BTBD7|55727|BTB (POZ) domain containing 7##NM_018167|BTBD7|55727|BTB (POZ) domain containing 7##BC047071|BTBD7|55727|BTB (POZ) domain containing 7##AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A	0.946623	CTCF.p2:-3:0.947
chr4	74537207	74537320	reg1012581.p1	9.909	+	AY217664 BC058835 NM_177532 AY217665 CR749283 AK126346 NM_201431	-51044	-	AK290556 NM_001133 BC109020 BC109021 L35486	-189793	+	NM_001134 V01514 AK297669 TSC_hg19_v1_chr4_+_74301937 AK297674 AK314817 BC027881 DQ890942 DQ894103 CU693306	-235308	+	NM_000584 Y00787 AK131067 AK311874 M17017 M26383 BC013615 AF043337 AB590232 DQ890564 DQ893727 BT007067 CR542151 Z11686	69035	+	NM_002993 AK311981 U81234 BC013744 DQ891500 DQ894692 AB463491	165106	+	NM_002620 BC130653 BC130657 HQ258042	181780	+	AY217664|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##BC058835|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_177532|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AY217665|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##CR749283|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK126346|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_201431|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK290556|AFM|173|afamin##NM_001133|AFM|173|afamin##BC109020|AFM|173|afamin##BC109021|AFM|173|afamin##L35486|AFM|173|afamin##NM_001134|AFP|174|alpha-fetoprotein##V01514|AFP|174|alpha-fetoprotein##AK297669|AFP|174|alpha-fetoprotein##AK297674|AFP|174|alpha-fetoprotein##AK314817|AFP|174|alpha-fetoprotein##BC027881|AFP|174|alpha-fetoprotein##DQ890942|AFP|174|alpha-fetoprotein##DQ894103|AFP|174|alpha-fetoprotein##NM_000584|IL8|3576|interleukin 8##Y00787|IL8|3576|interleukin 8##AK131067|IL8|3576|interleukin 8##AK311874|IL8|3576|interleukin 8##M17017|IL8|3576|interleukin 8##M26383|IL8|3576|interleukin 8##BC013615|IL8|3576|interleukin 8##DQ890564|IL8|3576|interleukin 8##DQ893727|IL8|3576|interleukin 8##BT007067|IL8|3576|interleukin 8##CR542151|IL8|3576|interleukin 8##Z11686|IL8|3576|interleukin 8##NM_002993|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##AK311981|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##U81234|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##BC013744|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ891500|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ894692|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##NM_002620|PF4V1|5197|platelet factor 4 variant 1##BC130653|PF4V1|5197|platelet factor 4 variant 1##BC130657|PF4V1|5197|platelet factor 4 variant 1##HQ258042|PF4V1|5197|platelet factor 4 variant 1	0.694154	CTCF.p2:6:0.694
chr6	44424133	44424263	reg1011950.p1	9.909	+	TSC_hg19_v1_chr6_+_44355461 AK128737 AK299738 BC001568 AB007892 AB590067 CU674768 DQ891623 DQ894814 U86753	-68698	+	NM_001253 TSC_hg19_v1_chr6_+_44355294	-68926	+	NM_145026 AK058171	-113758	+	NM_001015051 NM_001024630 AF053952	871858	+	AF073930 NM_003599 TSC_hg19_v1_chr6_-_45345614 AK303838 BC035816 BC050384 NM_181356 AK313874	921477	-	TSC_hg19_v1_chr6_+_45389825 NM_004348	965667	+	AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_001253|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_145026|SPATS1|221409|spermatogenesis associated, serine-rich 1##AK058171|SPATS1|221409|spermatogenesis associated, serine-rich 1##NM_001015051|RUNX2|860|runt-related transcription factor 2##NM_001024630|RUNX2|860|runt-related transcription factor 2##AF053952|RUNX2|860|runt-related transcription factor 2##AF073930|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_003599|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK303838|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC035816|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC050384|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_181356|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK313874|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_004348|RUNX2|860|runt-related transcription factor 2	0.999708	CTCF.p2:-11:1.000
chr1	204176328	204176446	reg1013443.p1	9.908	+	AF218017 BC022819 AK291695 NM_002256 TSC_hg19_v1_chr1_-_204165620	-10806	-	CR536498 AB464139 CU690486 BC033474 BC047752 NM_000537	-40945	-	TSC_hg19_v1_chr1_-_204121144 NM_018208	-55162	-	CU691306 TSC_hg19_v1_chr1_-_204183117 AB075871 BC058832 AK124645 NM_198447	6740	-	AB023186 BC152475 NM_014935 TSC_hg19_v1_chr1_-_204329058	152663	-	TSC_hg19_v1_chr1_+_204380508 BC009873	204134	+	AF218017|KISS1|3814|KiSS-1 metastasis-suppressor##BC022819|KISS1|3814|KiSS-1 metastasis-suppressor##AK291695|KISS1|3814|KiSS-1 metastasis-suppressor##NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor##CR536498|REN|5972|renin##BC033474|REN|5972|renin##BC047752|REN|5972|renin##NM_000537|REN|5972|renin##NM_018208|ETNK2|55224|ethanolamine kinase 2##AB075871|GOLT1A|127845|golgi transport 1A##BC058832|GOLT1A|127845|golgi transport 1A##AK124645|GOLT1A|127845|golgi transport 1A##NM_198447|GOLT1A|127845|golgi transport 1A##AB023186|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC152475|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##NM_014935|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6	1.003429	CTCF.p2:5:0.988
chr1	40618815	40618945	reg1010572.p1	9.908	+	NM_000310 NM_001142604	-55739	-	AK302232 AK310799 TSC_hg19_v1_chr1_-_40562925	-55953	-	TSC_hg19_v1_chr1_-_40562918 BC008426	-55961	-	TSC_hg19_v1_chr1_+_40627044 BC113666 NM_012421	8159	+	TSC_hg19_v1_chr1_+_40627058 AK307662 U22377 X58480	8177	+	TSC_hg19_v1_chr1_+_40627068 HQ258544	8196	+	NM_000310|PPT1|5538|palmitoyl-protein thioesterase 1##NM_001142604|PPT1|5538|palmitoyl-protein thioesterase 1##AK302232|PPT1|5538|palmitoyl-protein thioesterase 1##AK310799|PPT1|5538|palmitoyl-protein thioesterase 1##BC008426|PPT1|5538|palmitoyl-protein thioesterase 1##BC113666|RLF|6018|rearranged L-myc fusion##NM_012421|RLF|6018|rearranged L-myc fusion##AK307662|RLF|6018|rearranged L-myc fusion##U22377|RLF|6018|rearranged L-myc fusion##HQ258544|RLF|6018|rearranged L-myc fusion	0.123498	
chr14	23369531	23369660	reg1010228.p1	9.908	+	AK299238 AK096283 NM_173527 BC035663	-17160	+	TSC_hg19_v1_chr14_+_23341364 AL834518 AK291030 BC113714 BC113716	-28173	+	TSC_hg19_v1_chr14_+_23340981 NM_014045 AY358399 BX161500	-28574	+	TSC_hg19_v1_chr14_-_23388350 BX161440 BC024208 BC106012 AL834198 AF087905 AK001344 AF275678 AK125593 AK225792 AK295448 AK303668 AK308055 AK315620	18731	-	TSC_hg19_v1_chr14_-_23388359 BC002566	18772	-	TSC_hg19_v1_chr14_-_23388390 NM_001077351 NM_001077352 NM_018107	18797	-	AK299238|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##AK096283|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##NM_173527|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##BC035663|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##AL834518|LRP10|26020|low density lipoprotein receptor-related protein 10##AK291030|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113714|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113716|LRP10|26020|low density lipoprotein receptor-related protein 10##NM_014045|LRP10|26020|low density lipoprotein receptor-related protein 10##AY358399|LRP10|26020|low density lipoprotein receptor-related protein 10##BX161500|LRP10|26020|low density lipoprotein receptor-related protein 10##BX161440|RBM23|55147|RNA binding motif protein 23##BC024208|RBM23|55147|RNA binding motif protein 23##BC106012|RBM23|55147|RNA binding motif protein 23##AL834198|RBM23|55147|RNA binding motif protein 23##AF087905|RBM23|55147|RNA binding motif protein 23##AK001344|RBM23|55147|RNA binding motif protein 23##AF275678|RBM23|55147|RNA binding motif protein 23##AK125593|RBM23|55147|RNA binding motif protein 23##AK225792|RBM23|55147|RNA binding motif protein 23##AK295448|RBM23|55147|RNA binding motif protein 23##AK303668|RBM23|55147|RNA binding motif protein 23##AK308055|RBM23|55147|RNA binding motif protein 23##AK315620|RBM23|55147|RNA binding motif protein 23##BC002566|RBM23|55147|RNA binding motif protein 23##NM_001077351|RBM23|55147|RNA binding motif protein 23##NM_001077352|RBM23|55147|RNA binding motif protein 23##NM_018107|RBM23|55147|RNA binding motif protein 23	0.999603	CTCF.p2:14:1.000
chr21	34747060	34747205	reg1014532.p1	9.908	+	AK222770 AK222812 AK312631 TSC_hg19_v1_chr21_+_34697277 BC021825 J03171 BC002590 AB528746 CU692410 DQ891323 DQ894507	-49814	+	TSC_hg19_v1_chr21_+_34697236 NM_000629	-49914	+	TSC_hg19_v1_chr21_+_34638753 AK299961 AB590138 DQ892552 DQ895763 BT009777	-108378	+	TSC_hg19_v1_chr21_+_34775192 NM_005534 U05875	28064	+	TSC_hg19_v1_chr21_+_34775735 BC003624 U05877	28600	+	AK314005 TSC_hg19_v1_chr21_+_34775746 AK292246	28616	+	AK222770|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK222812|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK312631|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC021825|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##J03171|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC002590|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ891323|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ894507|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##NM_000629|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK299961|IL10RB|3588|interleukin 10 receptor, beta##DQ892552|IL10RB|3588|interleukin 10 receptor, beta##DQ895763|IL10RB|3588|interleukin 10 receptor, beta##BT009777|IL10RB|3588|interleukin 10 receptor, beta##NM_005534|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05875|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##BC003624|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05877|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK314005|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK292246|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)	0.99747	CTCF.p2:13:0.997
chrX	8711296	8711421	reg1012071.p1	9.908	+	TSC_hg19_v1_chrX_-_8700193 BC137426 BC137427 M97252 NM_000216 S60085	-11151	-	X60299 TSC_hg19_v1_chrX_-_8700155	-11215	-	AF167078 AF167080 NM_001001888	-278488	+	BC113449 BC143805 NM_001171186 BC112022 AF494343 NM_174951	58042	-	BC120955 BC120956 NM_205849	289744	-	TSC_hg19_v1_chrX_+_9431357 AK289409 NM_001139466 NM_001139467 NM_001139468 AK290962 BC032708	719989	+	BC137426|KAL1|3730|Kallmann syndrome 1 sequence##BC137427|KAL1|3730|Kallmann syndrome 1 sequence##M97252|KAL1|3730|Kallmann syndrome 1 sequence##NM_000216|KAL1|3730|Kallmann syndrome 1 sequence##S60085|KAL1|3730|Kallmann syndrome 1 sequence##X60299|KAL1|3730|Kallmann syndrome 1 sequence##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167080|VCX3B|425054|variable charge, X-linked 3B##NM_001001888|VCX3B|425054|variable charge, X-linked 3B##BC113449|FAM9A|171482|family with sequence similarity 9, member A##BC143805|FAM9A|171482|family with sequence similarity 9, member A##NM_001171186|FAM9A|171482|family with sequence similarity 9, member A##BC112022|FAM9A|171482|family with sequence similarity 9, member A##AF494343|FAM9A|171482|family with sequence similarity 9, member A##NM_174951|FAM9A|171482|family with sequence similarity 9, member A##BC120955|FAM9B|171483|family with sequence similarity 9, member B##BC120956|FAM9B|171483|family with sequence similarity 9, member B##NM_205849|FAM9B|171483|family with sequence similarity 9, member B##AK289409|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139466|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139467|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139468|TBL1X|6907|transducin (beta)-like 1X-linked##AK290962|TBL1X|6907|transducin (beta)-like 1X-linked##BC032708|TBL1X|6907|transducin (beta)-like 1X-linked	0.999908	CTCF.p2:8:1.000
chr4	80838460	80838598	reg1014041.p1	9.907	+	CU688758 DQ891321 DQ894505 BC058888 AK312768 BC029820 BC048274 X78712 NM_033214 AK292241 BC027598	-509162	-	BC063623 BC080651 BC004552 NM_032693	-591368	-	AK055774 BX648346 CU689134 AY424281 BC029604 TSC_hg19_v1_chr4_-_79860593 BC031256 BC047510 AK291232 NM_001040202 AX775925	-978047	-	AB527650 AY233452 TSC_hg19_v1_chr4_-_80993874 AY040326 BC114374 AB209913	155359	-	TSC_hg19_v1_chr4_-_80994237 AK091721 AX747144	155708	-	TSC_hg19_v1_chr4_-_80994394 NM_001145794 NM_058172 BC107876	155938	-	DQ891321|GK2|2712|glycerol kinase 2##DQ894505|GK2|2712|glycerol kinase 2##BC058888|GK2|2712|glycerol kinase 2##BC029820|GK2|2712|glycerol kinase 2##BC048274|GK2|2712|glycerol kinase 2##X78712|GK2|2712|glycerol kinase 2##NM_033214|GK2|2712|glycerol kinase 2##AK292241|GK2|2712|glycerol kinase 2##BC027598|GK2|2712|glycerol kinase 2##BC063623|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC080651|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC004552|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##NM_032693|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##AK055774|PAQR3|152559|progestin and adipoQ receptor family member III##BX648346|PAQR3|152559|progestin and adipoQ receptor family member III##AY424281|PAQR3|152559|progestin and adipoQ receptor family member III##BC029604|PAQR3|152559|progestin and adipoQ receptor family member III##BC031256|PAQR3|152559|progestin and adipoQ receptor family member III##BC047510|PAQR3|152559|progestin and adipoQ receptor family member III##AK291232|PAQR3|152559|progestin and adipoQ receptor family member III##NM_001040202|PAQR3|152559|progestin and adipoQ receptor family member III##AX775925|PAQR3|152559|progestin and adipoQ receptor family member III##AY233452|ANTXR2|118429|anthrax toxin receptor 2##AY040326|ANTXR2|118429|anthrax toxin receptor 2##BC114374|ANTXR2|118429|anthrax toxin receptor 2##AB209913|ANTXR2|118429|anthrax toxin receptor 2##NM_001145794|ANTXR2|118429|anthrax toxin receptor 2##NM_058172|ANTXR2|118429|anthrax toxin receptor 2##BC107876|ANTXR2|118429|anthrax toxin receptor 2	0.99546	CTCF.p2:-11:0.995
chr7	91808295	91808428	reg1013239.p1	9.907	+	NM_001161528	-13772	-	AK295932 NM_001146152	-44314	-	TSC_hg19_v1_chr7_+_91763907 BC042829 AL133568	-44473	+	AF296765 TSC_hg19_v1_chr7_-_91875235 AF310133 AY380057 AY380058 AY380059 AY380060 NM_004912 BC098442 AK055305 NM_001013406 NM_194454	66813	-	TSC_hg19_v1_chr7_-_91875443 AJ294850 AF388384 NM_194455 NM_194456	67052	-	TSC_hg19_v1_chr7_+_91875536 AB037807 NM_019004 BC063861	67248	+	NM_001161528|LRRD1|401387|leucine-rich repeats and death domain containing 1##AK295932|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##NM_001146152|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##BC042829|LOC613126|613126|uncharacterized LOC613126##AL133568|LOC613126|613126|uncharacterized LOC613126##AF296765|KRIT1|889|KRIT1, ankyrin repeat containing##AF310133|KRIT1|889|KRIT1, ankyrin repeat containing##AY380057|KRIT1|889|KRIT1, ankyrin repeat containing##AY380058|KRIT1|889|KRIT1, ankyrin repeat containing##AY380059|KRIT1|889|KRIT1, ankyrin repeat containing##AY380060|KRIT1|889|KRIT1, ankyrin repeat containing##NM_004912|KRIT1|889|KRIT1, ankyrin repeat containing##AK055305|KRIT1|889|KRIT1, ankyrin repeat containing##NM_001013406|KRIT1|889|KRIT1, ankyrin repeat containing##NM_194454|KRIT1|889|KRIT1, ankyrin repeat containing##AJ294850|KRIT1|889|KRIT1, ankyrin repeat containing##AF388384|KRIT1|889|KRIT1, ankyrin repeat containing##NM_194455|KRIT1|889|KRIT1, ankyrin repeat containing##NM_194456|KRIT1|889|KRIT1, ankyrin repeat containing##AB037807|ANKIB1|54467|ankyrin repeat and IBR domain containing 1##NM_019004|ANKIB1|54467|ankyrin repeat and IBR domain containing 1##BC063861|ANKIB1|54467|ankyrin repeat and IBR domain containing 1	0.835823	CTCF.p2:3:0.836
chr1	109642589	109642770	reg1012783.p1	9.906	+	BC066918 AK075191 TSC_hg19_v1_chr1_+_109633380 AF164793 AK310192 BC008739 BC065186 NM_020141 AK291293 BC067116	-9285	+	AB587451 TSC_hg19_v1_chr1_-_109618626 X84003 BC017821 BC121180 BC121181 AK312158 NM_005645	-24078	-	TSC_hg19_v1_chr1_-_109584725 AK225781 AB020700 AK289789 BC039254 BC034964 NM_001142550 NM_001142551 NM_014969	-57960	-	BC071822 TSC_hg19_v1_chr1_+_109642814	135	+	BC127904 BC141949 BC141950 BC150515 TSC_hg19_v1_chr1_+_109648698	5966	+	NM_001122961	13799	-	BC066918|TMEM167B|56900|transmembrane protein 167B##AK075191|TMEM167B|56900|transmembrane protein 167B##AF164793|TMEM167B|56900|transmembrane protein 167B##AK310192|TMEM167B|56900|transmembrane protein 167B##BC008739|TMEM167B|56900|transmembrane protein 167B##BC065186|TMEM167B|56900|transmembrane protein 167B##NM_020141|TMEM167B|56900|transmembrane protein 167B##AK291293|TMEM167B|56900|transmembrane protein 167B##BC067116|TMEM167B|56900|transmembrane protein 167B##X84003|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC121180|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC121181|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##AK312158|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##NM_005645|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##AK225781|WDR47|22911|WD repeat domain 47##AB020700|WDR47|22911|WD repeat domain 47##AK289789|WDR47|22911|WD repeat domain 47##BC039254|WDR47|22911|WD repeat domain 47##BC034964|WDR47|22911|WD repeat domain 47##NM_001142550|WDR47|22911|WD repeat domain 47##NM_001142551|WDR47|22911|WD repeat domain 47##NM_014969|WDR47|22911|WD repeat domain 47##BC071822|SCARNA2|677766|small Cajal body-specific RNA 2##NM_001122961|C1orf194|127003|chromosome 1 open reading frame 194	0.072027	
chr5	137977649	137977769	reg1012381.p1	9.906	+	NM_004134	-66392	-	AK222758 TSC_hg19_v1_chr5_-_137911101 BC000478 BC024034 AK297897 AK293990 L11066 AK315177	-66621	-	BC030634 CU674234 TSC_hg19_v1_chr5_-_137911029 AB463063 EU446981 AK297795 L15189	-66690	-	TSC_hg19_v1_chr5_+_138089107 NM_001903 AK296708 AK300439 D14705	111385	+	TSC_hg19_v1_chr5_+_138089137 AK094151 D13866 BC000385 AK304267	111422	+	AK309790 TSC_hg19_v1_chr5_-_138211025 AB007876 BC028172 AK291064 AK297332	233304	-	NM_004134|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK222758|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC000478|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC024034|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK297897|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK293990|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##L11066|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK315177|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC030634|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##EU446981|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK297795|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##L15189|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	0.936623	CTCF.p2:-7:0.937
chr6	143554133	143554263	reg1013112.p1	9.906	+	TSC_hg19_v1_chr6_+_143382055 BC025278 CU692954 DQ893291 DQ896622 BX538067	-172116	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	-172162	+	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	-172203	+	TSC_hg19_v1_chr6_-_143771811 BC037955 NM_182503	217631	-	TSC_hg19_v1_chr6_+_143771941 NM_003630 BC014551 BC015506 AB035307 AK025644 AK300907 AJ001625 AJ131389 AY277600 CR542062 CU677325	217802	+	CU678350 AK296485 BC003060 AK075458 TSC_hg19_v1_chr6_-_143832841 AY358551 BC051268 AK315475 NM_032020	278696	-	BC025278|AIG1|51390|androgen-induced 1##DQ893291|AIG1|51390|androgen-induced 1##DQ896622|AIG1|51390|androgen-induced 1##BX538067|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC037955|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_182503|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_003630|PEX3|8504|peroxisomal biogenesis factor 3##BC014551|PEX3|8504|peroxisomal biogenesis factor 3##BC015506|PEX3|8504|peroxisomal biogenesis factor 3##AB035307|PEX3|8504|peroxisomal biogenesis factor 3##AK025644|PEX3|8504|peroxisomal biogenesis factor 3##AK300907|PEX3|8504|peroxisomal biogenesis factor 3##AJ001625|PEX3|8504|peroxisomal biogenesis factor 3##AJ131389|PEX3|8504|peroxisomal biogenesis factor 3##AY277600|PEX3|8504|peroxisomal biogenesis factor 3##CR542062|PEX3|8504|peroxisomal biogenesis factor 3##AK296485|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC003060|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK075458|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AY358551|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC051268|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK315475|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_032020|FUCA2|2519|fucosidase, alpha-L- 2, plasma	0.994924	CTCF.p2:-8:0.995
chr11	63360711	63360819	reg1011493.p2	9.905	+	AK000563 NM_017878	-29911	-	NM_004585 AF092922 AK293357 AK312110 BC009678 AF060228 AB030815 AK123723	-56471	+	AF244975 AF244977 NM_001142537 NM_001142538	-85307	+	AB439591 AB528317 DQ892568 DQ895783 AB030814 AF317086 AX775893 BC103807 BC103808 TSC_hg19_v1_chr11_-_63381778	20866	-	BC001387 TSC_hg19_v1_chr11_-_63381880 X92814	21103	-	AK313075 NM_007069 TSC_hg19_v1_chr11_-_63381909	21144	-	AK000563|HRASLS2|54979|HRAS-like suppressor 2##NM_017878|HRASLS2|54979|HRAS-like suppressor 2##NM_004585|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF092922|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AK293357|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AK312110|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##BC009678|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF060228|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AB030815|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF244975|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AF244977|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142537|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142538|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AB439591|PLA2G16|11145|phospholipase A2, group XVI##DQ892568|PLA2G16|11145|phospholipase A2, group XVI##DQ895783|PLA2G16|11145|phospholipase A2, group XVI##AB030814|PLA2G16|11145|phospholipase A2, group XVI##AF317086|PLA2G16|11145|phospholipase A2, group XVI##BC103807|PLA2G16|11145|phospholipase A2, group XVI##BC103808|PLA2G16|11145|phospholipase A2, group XVI##BC001387|PLA2G16|11145|phospholipase A2, group XVI##X92814|PLA2G16|11145|phospholipase A2, group XVI##AK313075|PLA2G16|11145|phospholipase A2, group XVI##NM_007069|PLA2G16|11145|phospholipase A2, group XVI	0.68891	CTCF.p2:-3:0.689
chr18	70320360	70320478	reg1013563.p1	9.905	+	NM_182511 TSC_hg19_v1_chr18_-_70211738	-108689	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	-109644	-	TSC_hg19_v1_chr18_+_67956280 BC020082	-2364158	+	AF448839 NM_138999	212514	-	AF448838 BC050329 NM_001201465 NM_138966	214390	-	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	1494608	-	NM_182511|CBLN2|147381|cerebellin 2 precursor##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##BC020082|SOCS6|9306|suppressor of cytokine signaling 6##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15	0.491039	CTCF.p2:-3:0.491
chr11	93385366	93385496	reg1011650.p2	9.903	+	AF197137 TSC_hg19_v1_chr11_-_93276558 BC031564 NM_020179	-108896	-	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	-321588	+	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	-454346	-	TSC_hg19_v1_chr11_+_93394847 NM_033395 BC015989 BC017394	9403	+	AB051518 TSC_hg19_v1_chr11_+_93394877	9458	+	AF275800 TSC_hg19_v1_chr11_-_93474661 BC001972 AF086435 AK027016 NM_024116	89175	-	AF197137|C11orf75|56935|chromosome 11 open reading frame 75##BC031564|C11orf75|56935|chromosome 11 open reading frame 75##NM_020179|C11orf75|56935|chromosome 11 open reading frame 75##NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_033395|KIAA1731|85459|KIAA1731##BC015989|KIAA1731|85459|KIAA1731##BC017394|KIAA1731|85459|KIAA1731##AB051518|KIAA1731|85459|KIAA1731##AF275800|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##BC001972|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AF086435|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AK027016|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##NM_024116|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa	0.981701	CTCF.p2:-4:0.982
chr1	203238294	203238438	reg1014016.p1	9.903	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-39551	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-82440	-	BC008568 TSC_hg19_v1_chr1_-_203155877 AK312911	-82478	-	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	36323	+	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	79018	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	81843	-	U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.875499	CTCF.p2:15:0.875
chr1	228134420	228134525	reg1012242.p2	9.903	+	BC130400 HQ258179 NM_183062	-131091	+	CU676318 TSC_hg19_v1_chr1_+_227923140 BX648570 AK054633 BC011145 BC007786	-211340	+	TSC_hg19_v1_chr1_-_227923113 AK023030 AK022579 NM_001161465 NM_023007 AB528287	-211373	-	AB590917 HQ258230 AB060283 AK131041 TSC_hg19_v1_chr1_-_228135634 BC111960 BC113431 NM_003395	1159	-	NM_033131 AK056278 BC103921 BC103922 BC103923 AB060284	60301	+	AK000620 NM_001024226 NM_001658 TSC_hg19_v1_chr1_+_228270371	135899	+	BC130400|PRSS38|339501|protease, serine, 38##HQ258179|PRSS38|339501|protease, serine, 38##NM_183062|PRSS38|339501|protease, serine, 38##BX648570|SNAP47|116841|synaptosomal-associated protein, 47kDa##AK054633|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC011145|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC007786|SNAP47|116841|synaptosomal-associated protein, 47kDa##AK023030|JMJD4|65094|jumonji domain containing 4##AK022579|JMJD4|65094|jumonji domain containing 4##NM_001161465|JMJD4|65094|jumonji domain containing 4##NM_023007|JMJD4|65094|jumonji domain containing 4##HQ258230|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AB060283|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AK131041|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC111960|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC113431|WNT9A|7483|wingless-type MMTV integration site family, member 9A##NM_003395|WNT9A|7483|wingless-type MMTV integration site family, member 9A##NM_033131|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK056278|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103921|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103922|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103923|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AB060284|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK000620|ARF1|375|ADP-ribosylation factor 1##NM_001024226|ARF1|375|ADP-ribosylation factor 1##NM_001658|ARF1|375|ADP-ribosylation factor 1	1.616726	CTCF.p2:11:0.756	CTCF.p2:72:0.861
chr19	8009196	8009323	reg1011193.p2	9.903	+	TSC_hg19_v1_chr19_-_8008615 AK289634 NM_006351	-603	-	AF026030 BC000679 AB590328 CU689670 BC033628 TSC_hg19_v1_chr19_-_8008548 DQ891301 DQ894486 AK223062 AK309415 AF041254	-707	-	TSC_hg19_v1_chr19_-_7991004 BC062702 AK098834 NM_206833	-18243	-	TSC_hg19_v1_chr19_-_8070526 U38175 BC003376 NM_001419	61266	-	AK292662 NM_001201359 NM_005624	108386	+	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	108688	+	AK289634|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##NM_006351|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AF026030|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##BC033628|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##DQ891301|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##DQ894486|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK223062|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK309415|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AF041254|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##BC062702|CTXN1|404217|cortexin 1##AK098834|CTXN1|404217|cortexin 1##NM_206833|CTXN1|404217|cortexin 1##U38175|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##BC003376|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##NM_001419|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##AK292662|CCL25|6370|chemokine (C-C motif) ligand 25##NM_001201359|CCL25|6370|chemokine (C-C motif) ligand 25##NM_005624|CCL25|6370|chemokine (C-C motif) ligand 25##BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25	0.999806	CTCF.p2:3:0.984
chr9	85576541	85576671	reg1012528.p1	9.903	+	AK128831 NM_001001670	-972920	+	NM_207416 AK308327	-1018163	+	NM_001145197 AK125847 AK308327	-1033235	+	AK290986 TSC_hg19_v1_chr9_-_85677861	101219	-	BC023566 NM_152573 TSC_hg19_v1_chr9_-_85678058 AK056176	101460	-	GQ129452 BC023560 NM_001244962	305541	-	AK128831|FAM75D1|389763|family with sequence similarity 75, member D1##NM_001001670|FAM75D1|389763|family with sequence similarity 75, member D1##NM_207416|FAM75D3|389762|family with sequence similarity 75, member D3##AK308327|FAM75D4|389761|family with sequence similarity 75, member D4##NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4##AK125847|FAM75D4|389761|family with sequence similarity 75, member D4##AK308327|FAM75D4|389761|family with sequence similarity 75, member D4##AK290986|RASEF|158158|RAS and EF-hand domain containing##BC023566|RASEF|158158|RAS and EF-hand domain containing##NM_152573|RASEF|158158|RAS and EF-hand domain containing##AK056176|RASEF|158158|RAS and EF-hand domain containing##GQ129452|FRMD3|257019|FERM domain containing 3##BC023560|FRMD3|257019|FERM domain containing 3##NM_001244962|FRMD3|257019|FERM domain containing 3	0.978064	CTCF.p2:21:0.978
chrX	10158544	10158657	reg1011454.p3	9.902	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	-33546	+	BC098455 NM_015691	-174807	+	NM_001195081	-223203	+	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	376959	-	AF035360 NM_001193277 AY112903	386304	-	AF230976 AF230977 Y13667 AK226104 AK315095 BC053626 AK291215 TSC_hg19_v1_chrX_-_10588583 AY112901 AK297205 NM_000381 NM_033289	429965	-	NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112903|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF230976|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF230977|MID1|4281|midline 1 (Opitz/BBB syndrome)##Y13667|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK226104|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK315095|MID1|4281|midline 1 (Opitz/BBB syndrome)##BC053626|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK291215|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112901|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK297205|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_000381|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_033289|MID1|4281|midline 1 (Opitz/BBB syndrome)	0.020922	
chr15	60800127	60800264	reg1012937.p1	9.901	+	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-28921	-	AB587463 BC068065 BC009564 BC021114 BC052567 BC001388 BC013843 D00017 TSC_hg19_v1_chr15_-_60690186 AK222542 BX640598 AK297923 BC015834 BC023990 BC066955 BC093056 D28364 NM_001002857 NM_001002858 NM_001136015 NM_004039 AK309956 BC016774	-110034	-	TSC_hg19_v1_chr15_+_60296509 AK314075	-503646	+	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	84484	-	U04899 U04898 NM_002943 NM_134260	119490	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	721229	-	BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##BC068065|ANXA2|302|annexin A2##BC009564|ANXA2|302|annexin A2##BC021114|ANXA2|302|annexin A2##BC052567|ANXA2|302|annexin A2##BC001388|ANXA2|302|annexin A2##BC013843|ANXA2|302|annexin A2##D00017|ANXA2|302|annexin A2##AK222542|ANXA2|302|annexin A2##BX640598|ANXA2|302|annexin A2##AK297923|ANXA2|302|annexin A2##BC015834|ANXA2|302|annexin A2##BC023990|ANXA2|302|annexin A2##BC066955|ANXA2|302|annexin A2##BC093056|ANXA2|302|annexin A2##D28364|ANXA2|302|annexin A2##NM_001002857|ANXA2|302|annexin A2##NM_001002858|ANXA2|302|annexin A2##NM_001136015|ANXA2|302|annexin A2##NM_004039|ANXA2|302|annexin A2##BC016774|ANXA2|302|annexin A2##AK314075|FOXB1|27023|forkhead box B1##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A	0.995569	CTCF.p2:-8:0.996
chr11	35843453	35843579	reg1002687.p1	9.900	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-158843	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-159066	+	TSC_hg19_v1_chr11_+_35684404 BC013166 NM_017583	-159143	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	122095	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	467437	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	467470	-	DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##BC013166|TRIM44|54765|tripartite motif containing 44##NM_017583|TRIM44|54765|tripartite motif containing 44##BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9	0.938954	CTCF.p2:-1:0.939
chr16	74464090	74464209	reg1010831.p1	9.900	+	AK074773 AY358373 AK293982 NM_001011880 AL833339 AF448856	-8809	-	TSC_hg19_v1_chr16_-_74402059 BC037579 AK096768	-62051	-	TSC_hg19_v1_chr16_-_74401811 AK124154	-62337	-	TSC_hg19_v1_chr16_-_74640996 BC040133 U64791 BC031836	176806	-	TSC_hg19_v1_chr16_-_74641004 AK027032 AK304156 U28811 BC060822	176855	-	TSC_hg19_v1_chr16_-_74641016 NM_001145666 NM_001145667 NM_012201	176878	-	AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##AY358373|CLEC18B|497190|C-type lectin domain family 18, member B##AK293982|CLEC18B|497190|C-type lectin domain family 18, member B##NM_001011880|CLEC18B|497190|C-type lectin domain family 18, member B##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AF448856|CLEC18C|283971|C-type lectin domain family 18, member C##BC037579|LOC283922|283922|pyruvate dehydrogenase phosphatase regulatory subunit pseudogene##AK096768|LOC283922|283922|pyruvate dehydrogenase phosphatase regulatory subunit pseudogene##BC040133|GLG1|2734|golgi glycoprotein 1##U64791|GLG1|2734|golgi glycoprotein 1##BC031836|GLG1|2734|golgi glycoprotein 1##AK027032|GLG1|2734|golgi glycoprotein 1##AK304156|GLG1|2734|golgi glycoprotein 1##U28811|GLG1|2734|golgi glycoprotein 1##BC060822|GLG1|2734|golgi glycoprotein 1##NM_001145666|GLG1|2734|golgi glycoprotein 1##NM_001145667|GLG1|2734|golgi glycoprotein 1##NM_012201|GLG1|2734|golgi glycoprotein 1	0.997986	CTCF.p2:9:0.998
chr5	168106599	168106712	reg1012558.p1	9.900	+	TSC_hg19_v1_chr5_-_168006609 BC013705 NM_024594	-100140	-	TSC_hg19_v1_chr5_-_168006352 AK223285 AK022961	-100304	-	TSC_hg19_v1_chr5_+_167956546 AX721195	-150038	+	TSC_hg19_v1_chr5_-_168271862 BC023515	165204	-	AB383998 AK310549 TSC_hg19_v1_chr5_-_168728144 BC142665 BC142717 AY358884 AB017169 BC098388 AB011538 BC146759 NM_003062	621303	-	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	904066	+	BC013705|PANK3|79646|pantothenate kinase 3##NM_024594|PANK3|79646|pantothenate kinase 3##AK223285|PANK3|79646|pantothenate kinase 3##AK022961|PANK3|79646|pantothenate kinase 3##AK310549|SLIT3|6586|slit homolog 3 (Drosophila)##BC142665|SLIT3|6586|slit homolog 3 (Drosophila)##BC142717|SLIT3|6586|slit homolog 3 (Drosophila)##AY358884|SLIT3|6586|slit homolog 3 (Drosophila)##AB017169|SLIT3|6586|slit homolog 3 (Drosophila)##BC098388|SLIT3|6586|slit homolog 3 (Drosophila)##AB011538|SLIT3|6586|slit homolog 3 (Drosophila)##BC146759|SLIT3|6586|slit homolog 3 (Drosophila)##NM_003062|SLIT3|6586|slit homolog 3 (Drosophila)##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99	0.998864	CTCF.p2:-12:0.999
chr13	74282653	74282777	reg1011552.p1	9.899	+	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-649511	+	TSC_hg19_v1_chr13_+_73356270 NM_006346 AK309828 BC006009 BC008432 BC041806 BC051911 AY370776 AY375528	-926405	+	BC056143 TSC_hg19_v1_chr13_-_73356083 AK314715 BC038101 NM_001128226 NM_014953	-926509	-	AF161471 AF113122 NM_007249	425274	-	TSC_hg19_v1_chr13_-_74708425 AK291397	425681	-	CR749622 TSC_hg19_v1_chr13_-_75901948	1619207	-	AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_006346|PIBF1|10464|progesterone immunomodulatory binding factor 1##AK309828|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC006009|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC008432|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC041806|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC051911|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY370776|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY375528|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC056143|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AK314715|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##BC038101|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_001128226|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_014953|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK291397|KLF12|11278|Kruppel-like factor 12##CR749622|TBC1D4|9882|TBC1 domain family, member 4	0.945155	CTCF.p2:4:0.945
chr4	22899265	22899378	reg1012618.p1	9.899	+	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	-204729	+	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	-381767	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	-948937	-	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	992332	-	AF279891 TSC_hg19_v1_chr4_-_24586127	1686755	-	TSC_hg19_v1_chr4_-_24586154 AK303506 BC035974	1686839	-	BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##NM_147182|KCNIP4|80333|Kv channel interacting protein 4##AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.922095	CTCF.p2:4:0.922
chr9	95478896	95479004	reg1010840.p1	9.899	+	TSC_hg19_v1_chr9_-_95432542 BC026154 NM_022755	-46393	-	AF520811 TSC_hg19_v1_chr9_-_95432355 AK023225 AF351202	-46637	-	AB011792 AK303922 AK312820 AK296458 BX537976 NM_001197295 NM_001197296 NM_001393	-180638	-	AB014599 TSC_hg19_v1_chr9_-_95527124 AY052562 NM_001003800 NM_015250 BC073970	48133	-	AK299274 TSC_hg19_v1_chr9_-_95640325 AK091203 AX746846 NM_001007101 AL833202 NM_031486 AK292997 AK309617	161327	-	NM_001083536	230650	+	BC026154|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##NM_022755|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF520811|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AK023225|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF351202|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AB014599|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AY052562|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_001003800|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_015250|BICD2|23299|bicaudal D homolog 2 (Drosophila)##BC073970|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AK299274|ZNF484|83744|zinc finger protein 484##AK091203|ZNF484|83744|zinc finger protein 484##NM_001007101|ZNF484|83744|zinc finger protein 484##AL833202|ZNF484|83744|zinc finger protein 484##NM_031486|ZNF484|83744|zinc finger protein 484##AK292997|ZNF484|83744|zinc finger protein 484##AK309617|ZNF484|83744|zinc finger protein 484##NM_001083536|FGD3|89846|FYVE, RhoGEF and PH domain containing 3	0.994659	CTCF.p2:9:0.995
chr11	57519257	57519383	reg1013389.p1	9.897	+	NM_001145101	-68	-	TSC_hg19_v1_chr11_+_57508992 BC021122	-10320	+	NM_170746 BC111087 AF536829 AJ276250 TSC_hg19_v1_chr11_+_57508954 AJ276249 BC064570	-10468	+	NM_001085458 NM_001085459 NM_001085460 NM_001085461 NM_001085462 NM_001085463 NM_001085464 NM_001085465 NM_001085466 NM_001085467 NM_001085468 NM_001085469 NM_001206883 NM_001206884 NM_001206885 NM_001206886 NM_001206887 NM_001206888 NM_001206889 NM_001206890 NM_001206891 NM_001331 TSC_hg19_v1_chr11_+_57529331 AF062317 AF062318 AF062319 AF062320 AF062321 AF062322 AF062323 AF062324 AF062325 AF062326 AF062327 AF062328 AF062329 AF062330 AF062331 AF062332 AF062333 AF062334 AF062335 AF062336 AF062337 AF062338 AF062339 AF062340 AF062341 AF062342 AF062343 AF062344 BC075795	10019	+	BC110819 NM_001005212	272032	+	BC151146 BC151147 NM_001005186	279092	+	NM_001145101|BTBD18|643376|BTB (POZ) domain containing 18##BC021122|C11orf31|280636|chromosome 11 open reading frame 31##NM_170746|C11orf31|280636|chromosome 11 open reading frame 31##AF536829|C11orf31|280636|chromosome 11 open reading frame 31##AJ276250|C11orf31|280636|chromosome 11 open reading frame 31##AJ276249|C11orf31|280636|chromosome 11 open reading frame 31##BC064570|C11orf31|280636|chromosome 11 open reading frame 31##NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206883|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206884|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206885|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206886|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206887|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206888|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206889|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206890|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206891|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1##BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1##BC110819|OR9Q1|219956|olfactory receptor, family 9, subfamily Q, member 1##NM_001005212|OR9Q1|219956|olfactory receptor, family 9, subfamily Q, member 1##BC151146|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##BC151147|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##NM_001005186|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1	0.957031	CTCF.p2:7:0.957
chr1	26496268	26496385	reg1011403.p1	9.896	+	AK024112 NM_024869 BC025658 AK290715	-10786	+	AK312872 NM_001243533 NM_152835 TSC_hg19_v1_chr1_+_26438314 AF411102 BC028713 AK129596	-57987	+	NM_001243532	-58671	+	TSC_hg19_v1_chr1_+_26496395 AK311926 NM_015871 BC002580 BC019267 AB527484 D45213 EU446798	129	+	TSC_hg19_v1_chr1_+_26503979 AK296814 NM_006314 AB209335 AK222904 BC011604 BC012797 AF100153 AK001900 AK222817 AK292646 AK302056	7670	+	TSC_hg19_v1_chr1_+_26504028 AB590388 DQ892241 DQ895441 CU679980 BT006900	7705	+	AK024112|FAM110D|79927|family with sequence similarity 110, member D##NM_024869|FAM110D|79927|family with sequence similarity 110, member D##BC025658|FAM110D|79927|family with sequence similarity 110, member D##AK290715|FAM110D|79927|family with sequence similarity 110, member D##AK312872|PDIK1L|149420|PDLIM1 interacting kinase 1 like##NM_001243533|PDIK1L|149420|PDLIM1 interacting kinase 1 like##NM_152835|PDIK1L|149420|PDLIM1 interacting kinase 1 like##AF411102|PDIK1L|149420|PDLIM1 interacting kinase 1 like##BC028713|PDIK1L|149420|PDLIM1 interacting kinase 1 like##NM_001243532|PDIK1L|149420|PDLIM1 interacting kinase 1 like##AK311926|ZNF593|51042|zinc finger protein 593##NM_015871|ZNF593|51042|zinc finger protein 593##BC002580|ZNF593|51042|zinc finger protein 593##BC019267|ZNF593|51042|zinc finger protein 593##D45213|ZNF593|51042|zinc finger protein 593##EU446798|ZNF593|51042|zinc finger protein 593##AK296814|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##NM_006314|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AB209335|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK222904|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##BC011604|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##BC012797|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AF100153|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK001900|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK222817|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK292646|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK302056|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##DQ892241|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##DQ895441|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##BT006900|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1	0.03953	
chr11	85566000	85566158	reg1011810.p2	9.895	+	TSC_hg19_v1_chr11_-_85522185 AB046817 NM_032943 AK296224 AK296740	-43898	-	BC136450 BC144114 BC144115 NM_001162951 NM_001162953	-97036	-	BX647671 AK127504 NM_206927 NM_206928	-128596	-	AK124113 NM_173556	64	+	AB451308 BC048259 U45976 BC073961 TSC_hg19_v1_chr11_-_85779975	213819	-	TSC_hg19_v1_chr11_-_85780088 BC064357	214016	-	AB046817|SYTL2|54843|synaptotagmin-like 2##NM_032943|SYTL2|54843|synaptotagmin-like 2##AK296224|SYTL2|54843|synaptotagmin-like 2##AK296740|SYTL2|54843|synaptotagmin-like 2##BC136450|SYTL2|54843|synaptotagmin-like 2##BC144114|SYTL2|54843|synaptotagmin-like 2##BC144115|SYTL2|54843|synaptotagmin-like 2##NM_001162951|SYTL2|54843|synaptotagmin-like 2##NM_001162953|SYTL2|54843|synaptotagmin-like 2##BX647671|SYTL2|54843|synaptotagmin-like 2##AK127504|SYTL2|54843|synaptotagmin-like 2##NM_206927|SYTL2|54843|synaptotagmin-like 2##NM_206928|SYTL2|54843|synaptotagmin-like 2##AK124113|CCDC83|220047|coiled-coil domain containing 83##NM_173556|CCDC83|220047|coiled-coil domain containing 83##AB451308|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC048259|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##U45976|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC073961|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC064357|PICALM|8301|phosphatidylinositol binding clathrin assembly protein	0.998265	CTCF.p2:-16:0.998
chr17	42714037	42714175	reg1013201.p1	9.895	+	TSC_hg19_v1_chr17_+_42634696 NM_001466 BC052266 L37882 BC113402 BC113404 AB017364 AB590852	-79280	+	TSC_hg19_v1_chr17_-_42580958 NM_001002909	-133134	-	TSC_hg19_v1_chr17_-_42580760 BC136629 BC144323 AK025600 BC140010	-133342	-	TSC_hg19_v1_chr17_+_42733745 NM_001145080	19646	+	TSC_hg19_v1_chr17_-_42767190 CU690504 BC023298 AL833590 AK056357 BC047776 BX648868 NM_001099225 NM_144609	53022	-	BC016158 NM_025104 NM_145663 AK303282 TSC_hg19_v1_chr17_+_42786023 AK023149 AF448801	71906	+	NM_001466|FZD2|2535|frizzled family receptor 2##BC052266|FZD2|2535|frizzled family receptor 2##L37882|FZD2|2535|frizzled family receptor 2##BC113402|FZD2|2535|frizzled family receptor 2##BC113404|FZD2|2535|frizzled family receptor 2##AB017364|FZD2|2535|frizzled family receptor 2##NM_001002909|GPATCH8|23131|G patch domain containing 8##BC136629|GPATCH8|23131|G patch domain containing 8##BC144323|GPATCH8|23131|G patch domain containing 8##AK025600|GPATCH8|23131|G patch domain containing 8##BC140010|GPATCH8|23131|G patch domain containing 8##NM_001145080|C17orf104|284071|chromosome 17 open reading frame 104##BC023298|CCDC43|124808|coiled-coil domain containing 43##AL833590|CCDC43|124808|coiled-coil domain containing 43##AK056357|CCDC43|124808|coiled-coil domain containing 43##BC047776|CCDC43|124808|coiled-coil domain containing 43##BX648868|CCDC43|124808|coiled-coil domain containing 43##NM_001099225|CCDC43|124808|coiled-coil domain containing 43##NM_144609|CCDC43|124808|coiled-coil domain containing 43##BC016158|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##NM_025104|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##NM_145663|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##AK303282|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##AK023149|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##AF448801|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	0.016016	
chr6	2209613	2209733	reg1011982.p1	9.895	+	AF040260 NM_001253846	-33449	-	TSC_hg19_v1_chr6_+_1611545 BC169307	-598099	+	BC134421 NM_001453	-598993	+	CR541929 CR541947 DQ892789 DQ896036 AF042377 TSC_hg19_v1_chr6_-_2245809 AK130651 AK313953 BC000117 NM_001500	36125	-	TSC_hg19_v1_chr6_+_2245995 AK023629	36340	+	NM_152554	425624	-	AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase##BC169307|FOXC1|2296|forkhead box C1##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##CR541929|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541947|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ892789|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ896036|GMDS|2762|GDP-mannose 4,6-dehydratase##AF042377|GMDS|2762|GDP-mannose 4,6-dehydratase##AK130651|GMDS|2762|GDP-mannose 4,6-dehydratase##AK313953|GMDS|2762|GDP-mannose 4,6-dehydratase##BC000117|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001500|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_152554|C6orf195|154386|chromosome 6 open reading frame 195	0.057449	
chr8	145735172	145735289	reg1011345.p2	9.895	+	TSC_hg19_v1_chr8_+_145734481 BC011982 NM_138431	-732	+	AK225562 NM_005309 AK298488 AK303779 TSC_hg19_v1_chr8_+_145729525	-5733	+	BC053506 NM_032902 BC049841	-13078	+	TSC_hg19_v1_chr8_-_145743221 AB006532 NM_004260 BC020496	7977	-	TSC_hg19_v1_chr8_+_145743412 NM_014665 AK289473 BC011377 D25216	8143	+	TSC_hg19_v1_chr8_-_145752408 BC111067 NM_001024678	17180	-	BC011982|MFSD3|113655|major facilitator superfamily domain containing 3##NM_138431|MFSD3|113655|major facilitator superfamily domain containing 3##AK225562|GPT|2875|glutamic-pyruvate transaminase (alanine aminotransferase)##NM_005309|GPT|2875|glutamic-pyruvate transaminase (alanine aminotransferase)##AK298488|GPT|2875|glutamic-pyruvate transaminase (alanine aminotransferase)##AK303779|GPT|2875|glutamic-pyruvate transaminase (alanine aminotransferase)##BC053506|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A##NM_032902|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A##BC049841|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A##AB006532|RECQL4|9401|RecQ protein-like 4##NM_004260|RECQL4|9401|RecQ protein-like 4##BC020496|RECQL4|9401|RecQ protein-like 4##NM_014665|LRRC14|9684|leucine rich repeat containing 14##AK289473|LRRC14|9684|leucine rich repeat containing 14##BC011377|LRRC14|9684|leucine rich repeat containing 14##D25216|LRRC14|9684|leucine rich repeat containing 14##BC111067|LRRC24|441381|leucine rich repeat containing 24##NM_001024678|LRRC24|441381|leucine rich repeat containing 24	1.031126	CTCF.p2:5:0.998
chr17	39804263	39804389	reg1007540.p1	9.894	+	AB528302 DQ891101 DQ894283 BC072018 BC072019 BC011901 X62571 BC000159 BC056421 AK304373 AK095342 NM_000422	-23505	-	S79867 DQ891307 DQ896818 AF061812 BC039169 AK290853 AK309296 AK309278 NM_005557	-35318	-	BT007186 AB527765 DQ890733 DQ892997 DQ893905 BC042437 BC002690 BC019097 BC094830 AK309280 NM_000526	-61211	-	NM_005801 TSC_hg19_v1_chr17_+_39845138 AL050005 AK311862	40807	+	AK311209 TSC_hg19_v1_chr17_+_39845141	40815	+	TSC_hg19_v1_chr17_+_39845142 BC005118 L26247 AF083441 BC008710 AF100737 AJ012375 DQ896700 EU176404 BT006645 CR457051	40890	+	DQ891101|KRT17|3872|keratin 17##DQ894283|KRT17|3872|keratin 17##BC072018|KRT17|3872|keratin 17##BC072019|KRT17|3872|keratin 17##BC011901|KRT17|3872|keratin 17##X62571|KRT17|3872|keratin 17##BC000159|KRT17|3872|keratin 17##BC056421|KRT17|3872|keratin 17##AK304373|KRT17|3872|keratin 17##AK095342|KRT17|3872|keratin 17##NM_000422|KRT17|3872|keratin 17##S79867|KRT16|3868|keratin 16##DQ891307|KRT16|3868|keratin 16##DQ896818|KRT16|3868|keratin 16##AF061812|KRT16|3868|keratin 16##BC039169|KRT16|3868|keratin 16##AK290853|KRT16|3868|keratin 16##NM_005557|KRT16|3868|keratin 16##BT007186|KRT14|3861|keratin 14##DQ890733|KRT14|3861|keratin 14##DQ892997|KRT14|3861|keratin 14##DQ893905|KRT14|3861|keratin 14##BC042437|KRT14|3861|keratin 14##BC002690|KRT14|3861|keratin 14##BC019097|KRT14|3861|keratin 14##BC094830|KRT14|3861|keratin 14##NM_000526|KRT14|3861|keratin 14##NM_005801|EIF1|10209|eukaryotic translation initiation factor 1##AL050005|EIF1|10209|eukaryotic translation initiation factor 1##AK311862|EIF1|10209|eukaryotic translation initiation factor 1##AK311209|EIF1|10209|eukaryotic translation initiation factor 1##BC005118|EIF1|10209|eukaryotic translation initiation factor 1##L26247|EIF1|10209|eukaryotic translation initiation factor 1##AF083441|EIF1|10209|eukaryotic translation initiation factor 1##BC008710|EIF1|10209|eukaryotic translation initiation factor 1##AF100737|EIF1|10209|eukaryotic translation initiation factor 1##AJ012375|EIF1|10209|eukaryotic translation initiation factor 1##DQ896700|EIF1|10209|eukaryotic translation initiation factor 1##EU176404|EIF1|10209|eukaryotic translation initiation factor 1##BT006645|EIF1|10209|eukaryotic translation initiation factor 1##CR457051|EIF1|10209|eukaryotic translation initiation factor 1	0.999874	CTCF.p2:-3:1.000
chr17	603876	604001	reg1013534.p1	9.894	+	TSC_hg19_v1_chr17_+_260159 AK128660 NM_001013672 BC141806 BC057385 BC070116 CU687042	-343758	+	TSC_hg19_v1_chr17_-_202619 NM_001190411 NM_001190412 NM_001190413 NM_006987	-401314	-	TSC_hg19_v1_chr17_-_202589 AK000469 AK291950	-401358	-	CU675257 EU021218 EU434648 EU434649 EU434650 AF246287 AY444797 BC006116 TSC_hg19_v1_chr17_-_618080 BC040223 AF318335 AK290343 AK092532 AX747587 NM_001128159 NM_018289	14101	-	TSC_hg19_v1_chr17_+_635806 AF477201 BC026023 AK025935 AK292065 NM_024792 CU693104 AK125146	31848	+	TSC_hg19_v1_chr17_-_655412 AB463052 AF173856 BC036024 AK302722 BC032084 BC020062	51482	-	AK128660|C17orf97|400566|chromosome 17 open reading frame 97##NM_001013672|C17orf97|400566|chromosome 17 open reading frame 97##BC141806|C17orf97|400566|chromosome 17 open reading frame 97##BC057385|C17orf97|400566|chromosome 17 open reading frame 97##BC070116|C17orf97|400566|chromosome 17 open reading frame 97##NM_001190411|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190412|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190413|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_006987|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AK000469|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AK291950|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##EU021218|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434648|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434649|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434650|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF246287|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AY444797|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC006116|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC040223|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF318335|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK290343|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK092532|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_001128159|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_018289|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF477201|FAM57A|79850|family with sequence similarity 57, member A##BC026023|FAM57A|79850|family with sequence similarity 57, member A##AK025935|FAM57A|79850|family with sequence similarity 57, member A##AK292065|FAM57A|79850|family with sequence similarity 57, member A##NM_024792|FAM57A|79850|family with sequence similarity 57, member A##AK125146|FAM57A|79850|family with sequence similarity 57, member A##AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4##AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4	0.966808	CTCF.p2:5:0.967
chr19	14143132	14143259	reg1012554.p2	9.894	+	TSC_hg19_v1_chr19_+_14142622 BC028003 DQ891051 DQ894230 CU688366	-548	+	AF265242 AY358876 TSC_hg19_v1_chr19_+_14142572	-610	+	TSC_hg19_v1_chr19_+_14142542 AF053004 AF106912	-681	+	NM_001145028	26775	-	TSC_hg19_v1_chr19_-_14201272 AY453840 NM_138352	58081	-	TSC_hg19_v1_chr19_-_14224999 AF208004 AF224718 NM_207518 AK292284 AF239744	81859	-	BC028003|IL27RA|9466|interleukin 27 receptor, alpha##DQ891051|IL27RA|9466|interleukin 27 receptor, alpha##DQ894230|IL27RA|9466|interleukin 27 receptor, alpha##AF265242|IL27RA|9466|interleukin 27 receptor, alpha##AY358876|IL27RA|9466|interleukin 27 receptor, alpha##AF053004|IL27RA|9466|interleukin 27 receptor, alpha##AF106912|IL27RA|9466|interleukin 27 receptor, alpha##NM_001145028|PALM3|342979|paralemmin 3##AY453840|SAMD1|90378|sterile alpha motif domain containing 1##NM_138352|SAMD1|90378|sterile alpha motif domain containing 1##AF208004|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF224718|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##NM_207518|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AK292284|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF239744|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha	0.055618	
chr8	125385059	125385163	reg1010194.p1	9.894	+	TSC_hg19_v1_chr8_-_125384925 BC041379 NM_194291	-159	-	BC101502 BC101506 AK057332 TSC_hg19_v1_chr8_-_125183771	-201373	-	AB196633 NM_001039112	-520885	+	TSC_hg19_v1_chr8_+_125463060 NM_017956 AK225083 AK000779 AK222727 BC011713 BC003057	77961	+	TSC_hg19_v1_chr8_-_125486793 CR933665	101666	-	TSC_hg19_v1_chr8_-_125486808 AK075052	101720	-	BC041379|TMEM65|157378|transmembrane protein 65##NM_194291|TMEM65|157378|transmembrane protein 65##BC101502|C8orf78|157376|chromosome 8 open reading frame 78##BC101506|C8orf78|157376|chromosome 8 open reading frame 78##AK057332|C8orf78|157376|chromosome 8 open reading frame 78##AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_017956|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK225083|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK000779|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK222727|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC011713|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC003057|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)	0.041456	
chr3	127415145	127415257	reg1011960.p2	9.893	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-23384	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-67169	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-97917	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	126229	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	126941	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	219117	+	NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.014557	
chr8	40059398	40059508	reg1011730.p2	9.893	+	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	-48435	+	AK128691 NM_194294	-266980	+	NM_002164 AK313259 BC027882 X17668 AY221100 CU693308 JF772862	-288069	+	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	695884	-	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	1107577	-	TSC_hg19_v1_chr8_+_41348077 NM_001174124 NM_016099	1288620	+	BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1##AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1##X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1##AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1##JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1##NM_001174124|GOLGA7|51125|golgin A7##NM_016099|GOLGA7|51125|golgin A7	0.999576	CTCF.p2:10:1.000
chr10	112360377	112360503	reg1012328.p1	9.892	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-16325	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-32948	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-102689	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	43689	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	271172	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	271274	+	AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)	0.851384	CTCF.p2:15:0.851
chr9	108644125	108644256	reg1014002.p1	9.892	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-187272	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	-187337	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	-219433	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	981174	+	TSC_hg19_v1_chr9_+_109686439 CR749850	1042279	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	1401342	+	AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##CR749850|ZNF462|58499|zinc finger protein 462##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.99151	CTCF.p2:-12:0.992
chr16	72881176	72881297	reg1013014.p1	9.891	+	TSC_hg19_v1_chr16_+_72699031 AK021563	-182172	+	AK122925 NM_001160213	-674888	-	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	-675193	-	TSC_hg19_v1_chr16_-_72991733 BC029653	110469	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	200985	-	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	211350	-	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC029653|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3	0.274046	CTCF.p2:-14:0.274
chr3	31737157	31737265	reg1013058.p1	9.891	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	-162729	+	TSC_hg19_v1_chr3_+_31574468 AK074587	-162762	+	TSC_hg19_v1_chr3_+_31574119 AK311488	-163081	+	TSC_hg19_v1_chr3_-_32022751 BC003168 AF346291 AK304067 AK097503	285558	-	AK294003 NM_001137674	286054	+	AF392451 NM_001174060 NM_017784	286078	-	AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##BC003168|OSBPL10|114884|oxysterol binding protein-like 10##AF346291|OSBPL10|114884|oxysterol binding protein-like 10##AK304067|OSBPL10|114884|oxysterol binding protein-like 10##AK294003|ZNF860|344787|zinc finger protein 860##NM_001137674|ZNF860|344787|zinc finger protein 860##AF392451|OSBPL10|114884|oxysterol binding protein-like 10##NM_001174060|OSBPL10|114884|oxysterol binding protein-like 10##NM_017784|OSBPL10|114884|oxysterol binding protein-like 10	0.033115	
chr9	117101509	117101628	reg1012669.p1	9.891	+	NM_000608 AK312226 BC015964 BC056239 AK303760 CR456930 CU677539	-9442	+	NM_000607 X02544 AK316207 AK312035 BC026238 BC007032 BC104818 BC104820 BC143313 BC143314 M13692 AB463987 BT019790 CU693168	-16211	+	TSC_hg19_v1_chr9_+_116930778 AB058773	-170736	+	BC042202 TSC_hg19_v1_chr9_-_117111294	9721	-	AY703041 AY703042 AK131082 AK160382 TSC_hg19_v1_chr9_-_117150263 AB075848	48722	-	AY703040 BC055285 NM_030767	55116	-	NM_000608|ORM2|5005|orosomucoid 2##AK312226|ORM2|5005|orosomucoid 2##BC015964|ORM2|5005|orosomucoid 2##BC056239|ORM2|5005|orosomucoid 2##AK303760|ORM2|5005|orosomucoid 2##CR456930|ORM2|5005|orosomucoid 2##NM_000607|ORM1|5004|orosomucoid 1##X02544|ORM1|5004|orosomucoid 1##AK316207|ORM1|5004|orosomucoid 1##AK312035|ORM1|5004|orosomucoid 1##BC026238|ORM1|5004|orosomucoid 1##BC007032|ORM1|5004|orosomucoid 1##BC104818|ORM1|5004|orosomucoid 1##BC104820|ORM1|5004|orosomucoid 1##BC143313|ORM1|5004|orosomucoid 1##BC143314|ORM1|5004|orosomucoid 1##M13692|ORM1|5004|orosomucoid 1##BT019790|ORM1|5004|orosomucoid 1##AB058773|COL27A1|85301|collagen, type XXVII, alpha 1##BC042202|AKNA|80709|AT-hook transcription factor##AY703041|AKNA|80709|AT-hook transcription factor##AY703042|AKNA|80709|AT-hook transcription factor##AK131082|AKNA|80709|AT-hook transcription factor##AK160382|AKNA|80709|AT-hook transcription factor##AB075848|AKNA|80709|AT-hook transcription factor##AY703040|AKNA|80709|AT-hook transcription factor##BC055285|AKNA|80709|AT-hook transcription factor##NM_030767|AKNA|80709|AT-hook transcription factor	1.025085	CTCF.p2:-6:1.000
chr5	132219047	132219187	reg1013153.p1	9.890	+	TSC_hg19_v1_chr5_+_132209359 AJ306405 AY052782 NM_052971 BC070199	-9761	+	TSC_hg19_v1_chr5_+_132202333 NM_014402 AK297061 BC090048 BC064949 AK312148 BC001390	-16770	+	NM_005260	-18641	-	TSC_hg19_v1_chr5_-_132272811 CU687624 CU693016	53726	-	TSC_hg19_v1_chr5_-_132299044 AF213987	79900	-	TSC_hg19_v1_chr5_-_132299222 BC063007 BC025700	80093	-	AJ306405|LEAP2|116842|liver expressed antimicrobial peptide 2##AY052782|LEAP2|116842|liver expressed antimicrobial peptide 2##NM_052971|LEAP2|116842|liver expressed antimicrobial peptide 2##BC070199|LEAP2|116842|liver expressed antimicrobial peptide 2##NM_014402|UQCRQ|27089|ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa##AK297061|UQCRQ|27089|ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa##BC090048|UQCRQ|27089|ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa##BC064949|UQCRQ|27089|ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa##AK312148|UQCRQ|27089|ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa##BC001390|UQCRQ|27089|ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa##NM_005260|GDF9|2661|growth differentiation factor 9##AF213987|AFF4|27125|AF4/FMR2 family, member 4##BC063007|AFF4|27125|AF4/FMR2 family, member 4##BC025700|AFF4|27125|AF4/FMR2 family, member 4	0.996071	CTCF.p2:7:0.996
chr11	125293258	125293378	reg1011158.p1	9.888	+	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	-258692	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	-258740	+	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	-311849	-	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	72823	-	TSC_hg19_v1_chr11_+_125439294 NM_001007277 NM_004879	145977	+	TSC_hg19_v1_chr11_+_125439332 AB209820	146007	+	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_001007277|EI24|9538|etoposide induced 2.4 mRNA##NM_004879|EI24|9538|etoposide induced 2.4 mRNA##AB209820|EI24|9538|etoposide induced 2.4 mRNA	0.875784	CTCF.p2:12:0.876
chr1	118301582	118301715	reg1013435.p1	9.888	+	TSC_hg19_v1_chr1_+_118148669 AK000209 BC036516 BC131726	-152969	+	TSC_hg19_v1_chr1_+_118148542 NM_017709	-153062	+	TSC_hg19_v1_chr1_+_117910083 BC052954 AK307842 NM_006699 BC063300	-391555	+	TSC_hg19_v1_chr1_-_118472186 BC013132	170534	-	AK000149 BC013324 TSC_hg19_v1_chr1_-_118472244 NM_001135589 NM_017686	170605	-	BC058836 TSC_hg19_v1_chr1_+_118472357	170705	+	AK000209|FAM46C|54855|family with sequence similarity 46, member C##BC036516|FAM46C|54855|family with sequence similarity 46, member C##BC131726|FAM46C|54855|family with sequence similarity 46, member C##NM_017709|FAM46C|54855|family with sequence similarity 46, member C##BC052954|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##AK307842|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##NM_006699|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC063300|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC013132|GDAP2|54834|ganglioside induced differentiation associated protein 2##AK000149|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC013324|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_001135589|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_017686|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC058836|WDR3|10885|WD repeat domain 3	0.999928	CTCF.p2:3:1.000
chr1	198057592	198057726	reg1012700.p1	9.888	+	TSC_hg19_v1_chr1_+_197886502 AY273889 NM_020204	-171152	+	AJ296272 NM_001014434 AJ277915	-176020	+	BC130608 BC130634 NM_001024594 HQ258066 BC038214	-185928	+	TSC_hg19_v1_chr1_+_198126162 NM_133494 AK313411	68395	+	NM_133262 NM_133326	452415	-	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	550514	+	AY273889|LHX9|56956|LIM homeobox 9##NM_020204|LHX9|56956|LIM homeobox 9##AJ296272|LHX9|56956|LIM homeobox 9##NM_001014434|LHX9|56956|LIM homeobox 9##AJ277915|LHX9|56956|LIM homeobox 9##BC130608|C1orf53|388722|chromosome 1 open reading frame 53##BC130634|C1orf53|388722|chromosome 1 open reading frame 53##NM_001024594|C1orf53|388722|chromosome 1 open reading frame 53##HQ258066|C1orf53|388722|chromosome 1 open reading frame 53##BC038214|C1orf53|388722|chromosome 1 open reading frame 53##NM_133494|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##AK313411|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	0.537783	CTCF.p2:-12:0.538
chr1	72503565	72503666	reg1008535.p1	9.888	+	NM_005455 NM_203350	-956644	-	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	-956908	-	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	-990236	-	TSC_hg19_v1_chr1_-_72748182 AK295481 BX538014 AK092307 AX747470 NM_173808	244596	-	TSC_hg19_v1_chr1_-_72748491 AY358132	244890	-	AK131476 BC020778 BX647210 TSC_hg19_v1_chr1_-_74663861 NM_001105659	2160233	-	NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK295481|NEGR1|257194|neuronal growth regulator 1##BX538014|NEGR1|257194|neuronal growth regulator 1##AK092307|NEGR1|257194|neuronal growth regulator 1##NM_173808|NEGR1|257194|neuronal growth regulator 1##AK131476|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BC020778|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BX647210|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001105659|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3	0.999518	CTCF.p2:6:1.000
chr2	149684323	149684443	reg1009520.p1	9.888	+	TSC_hg19_v1_chr2_+_149633176 AB384491	-51204	+	BC017298 TSC_hg19_v1_chr2_+_149632844	-51543	+	TSC_hg19_v1_chr2_+_149632795 NM_004522 BC002721 BC025961 AB011103	-51587	+	BC040176 NM_177964	210597	+	AK124733 NM_001195685	502115	+	NM_194317 TSC_hg19_v1_chr2_+_150187114 AY358623 AK309248	502719	+	BC017298|KIF5C|3800|kinesin family member 5C##NM_004522|KIF5C|3800|kinesin family member 5C##BC002721|KIF5C|3800|kinesin family member 5C##BC025961|KIF5C|3800|kinesin family member 5C##AB011103|KIF5C|3800|kinesin family member 5C##BC040176|LYPD6B|130576|LY6/PLAUR domain containing 6B##NM_177964|LYPD6B|130576|LY6/PLAUR domain containing 6B##AK124733|LYPD6|130574|LY6/PLAUR domain containing 6##NM_001195685|LYPD6|130574|LY6/PLAUR domain containing 6##NM_194317|LYPD6|130574|LY6/PLAUR domain containing 6##AY358623|LYPD6|130574|LY6/PLAUR domain containing 6##AK309248|LYPD6|130574|LY6/PLAUR domain containing 6	0.060889	
chr3	46249911	46250044	reg1008884.p2	9.888	+	BC064991 TSC_hg19_v1_chr3_-_46249804 L10918 BC051306 NM_001295	-168	-	AB189434 AB189435 NM_001024644 NM_005283	-180999	-	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	-212656	-	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	33939	+	AK292685 NM_001123041 NM_001123396	145252	+	TSC_hg19_v1_chr3_+_46395601 AK292920 U03905	145630	+	BC064991|CCR1|1230|chemokine (C-C motif) receptor 1##L10918|CCR1|1230|chemokine (C-C motif) receptor 1##BC051306|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001295|CCR1|1230|chemokine (C-C motif) receptor 1##AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2##AK292920|CCR2|729230|chemokine (C-C motif) receptor 2##U03905|CCR2|729230|chemokine (C-C motif) receptor 2	0.01519	
chr4	119903069	119903201	reg1012760.p1	9.888	+	TSC_hg19_v1_chr4_+_119810008 AL833547 NM_001128933 NM_001128934 NM_133477 BC150629 AK307711 CR936673 AK304121 AL832031 AL833294 AL832363 BC136256 AM392848 AM393854 EU481975	-93051	+	TSC_hg19_v1_chr4_-_119757290 NM_014822	-145794	-	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	-145908	-	BX647849 TSC_hg19_v1_chr4_+_119947854	44700	+	FN422000 TSC_hg19_v1_chr4_+_119948273	45138	+	AJ010482 TSC_hg19_v1_chr4_+_119948327	45189	+	AL833547|SYNPO2|171024|synaptopodin 2##NM_001128933|SYNPO2|171024|synaptopodin 2##NM_001128934|SYNPO2|171024|synaptopodin 2##NM_133477|SYNPO2|171024|synaptopodin 2##BC150629|SYNPO2|171024|synaptopodin 2##AK307711|SYNPO2|171024|synaptopodin 2##CR936673|SYNPO2|171024|synaptopodin 2##AK304121|SYNPO2|171024|synaptopodin 2##AL832031|SYNPO2|171024|synaptopodin 2##AL833294|SYNPO2|171024|synaptopodin 2##AL832363|SYNPO2|171024|synaptopodin 2##BC136256|SYNPO2|171024|synaptopodin 2##AM392848|SYNPO2|171024|synaptopodin 2##AM393854|SYNPO2|171024|synaptopodin 2##EU481975|SYNPO2|171024|synaptopodin 2##NM_014822|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BX647849|SYNPO2|171024|synaptopodin 2##FN422000|SYNPO2|171024|synaptopodin 2##AJ010482|SYNPO2|171024|synaptopodin 2	0.953007	CTCF.p2:-12:0.953
chr8	11104529	11104661	reg1013700.p1	9.888	+	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	-45730	-	TSC_hg19_v1_chr8_-_10697386 AF205718 AF418553 AJ344104	-407186	-	AY238941 AY523566 BC093762 BC143382 NM_017884 TSC_hg19_v1_chr8_-_10697379 AY029161 AK313715 BC015479 AK296724	-407261	-	TSC_hg19_v1_chr8_+_11141999 BC034990 NM_015458	37417	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	37760	+	AJ291677 NM_054028 BC131696	83915	+	AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AF205718|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF418553|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ344104|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY238941|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY523566|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC093762|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC143382|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##NM_017884|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AK313715|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC015479|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC034990|MTMR9|66036|myotubularin related protein 9##NM_015458|MTMR9|66036|myotubularin related protein 9##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9##AJ291677|SLC35G5|83650|solute carrier family 35, member G5##NM_054028|SLC35G5|83650|solute carrier family 35, member G5##BC131696|SLC35G5|83650|solute carrier family 35, member G5	0.994593	CTCF.p2:-13:0.995
chr8	144483463	144483580	reg1011219.p2	9.888	+	TSC_hg19_v1_chr8_+_144451016 NM_052924 BC012135 BC025767 AB528055 AY082588 CU693058 AB067516	-32431	+	AF349017 NM_052963 TSC_hg19_v1_chr8_-_144417051	-66466	-	TSC_hg19_v1_chr8_-_144417034 AK303237 AK315913 AK308475 AK311647 BC071914 BC044646 BC052285	-66506	-	NM_201589	29080	-	D63484 TSC_hg19_v1_chr8_-_144623602 BC038670	140070	-	TSC_hg19_v1_chr8_-_144623640 NM_015117	140111	-	NM_052924|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC012135|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC025767|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AY082588|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AB067516|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AF349017|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_052963|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK303237|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK315913|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK308475|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK311647|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC071914|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC044646|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC052285|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_201589|MAFA|389692|v-maf musculoaponeurotic fibrosarcoma oncogene homolog A (avian)##D63484|ZC3H3|23144|zinc finger CCCH-type containing 3##BC038670|ZC3H3|23144|zinc finger CCCH-type containing 3##NM_015117|ZC3H3|23144|zinc finger CCCH-type containing 3	0.179112	
chr8	78518540	78518663	reg1015345.p1	9.888	+	NM_001172086 NM_001172087	-605322	-	BC000661 BC093043 TSC_hg19_v1_chr8_-_77912318 BC005375 M85038 AK312997 M86852 NM_000318 NM_001079867	-606192	-	AK131399 TSC_hg19_v1_chr8_+_77765961	-752712	+	NM_006823 NM_181839 S76965	909734	+	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	1059719	+	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	1199047	-	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2##NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2##BC000661|PEX2|5828|peroxisomal biogenesis factor 2##BC093043|PEX2|5828|peroxisomal biogenesis factor 2##BC005375|PEX2|5828|peroxisomal biogenesis factor 2##M85038|PEX2|5828|peroxisomal biogenesis factor 2##AK312997|PEX2|5828|peroxisomal biogenesis factor 2##M86852|PEX2|5828|peroxisomal biogenesis factor 2##NM_000318|PEX2|5828|peroxisomal biogenesis factor 2##NM_001079867|PEX2|5828|peroxisomal biogenesis factor 2##AK131399|ZFHX4|79776|zinc finger homeobox 4##NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7	0.221294	CTCF.p2:2:0.221
chrX	135659875	135659994	reg1012007.p1	9.888	+	BC000045 NM_016267 AK309912 BC003362 AF137387	-45567	+	BC009896 NM_014500 TSC_hg19_v1_chrX_+_135579729 AK299403 AK225870 U76992 CU679521 EU176345 BT006886	-80178	+	AB209303 NM_001163280 TSC_hg19_v1_chrX_+_135579394	-80617	+	BC071754 NM_000074 AK292637 X68550 X67878 L07414 BC074950 X96710 Z15017 FN298241 CU687160 AB590912 AF529195 AY197739	70437	+	AK129909 TSC_hg19_v1_chrX_-_135749484	89532	-	AK294929 TSC_hg19_v1_chrX_-_135849503 AK295709 AK299861	189573	-	BC000045|VGLL1|51442|vestigial like 1 (Drosophila)##NM_016267|VGLL1|51442|vestigial like 1 (Drosophila)##AK309912|VGLL1|51442|vestigial like 1 (Drosophila)##BC003362|VGLL1|51442|vestigial like 1 (Drosophila)##AF137387|VGLL1|51442|vestigial like 1 (Drosophila)##BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1##NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1##AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1##AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1##U76992|HTATSF1|27336|HIV-1 Tat specific factor 1##EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1##BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1##AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1##NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1##BC071754|CD40LG|959|CD40 ligand##NM_000074|CD40LG|959|CD40 ligand##AK292637|CD40LG|959|CD40 ligand##X68550|CD40LG|959|CD40 ligand##X67878|CD40LG|959|CD40 ligand##L07414|CD40LG|959|CD40 ligand##BC074950|CD40LG|959|CD40 ligand##Z15017|CD40LG|959|CD40 ligand##FN298241|CD40LG|959|CD40 ligand##AF529195|CD40LG|959|CD40 ligand##AY197739|CD40LG|959|CD40 ligand##AK129909|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK294929|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK295709|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK299861|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	0.966379	CTCF.p2:-12:0.966
chr2	246642	246736	reg1012347.p2	9.887	+	DQ431183 TSC_hg19_v1_chr2_-_46477 AK302544 NM_001077710	-200204	-	None	None	None	None	None	None	AK055801 BC008374 BC013286 BC008375 AK026507 TSC_hg19_v1_chr2_-_264033	17318	-	TSC_hg19_v1_chr2_-_264039 NM_001159597 NM_015677	17363	-	BC043234 TSC_hg19_v1_chr2_-_264802 AK292312 BC030778 BC034974	18090	-	DQ431183|FAM110C|642273|family with sequence similarity 110, member C##AK302544|FAM110C|642273|family with sequence similarity 110, member C##NM_001077710|FAM110C|642273|family with sequence similarity 110, member C##AK055801|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC008374|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC013286|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC008375|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##AK026507|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##NM_001159597|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##NM_015677|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC043234|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##AK292312|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC030778|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC034974|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)	0.998204	CTCF.p2:-12:0.998
chr17	41923737	41923834	reg1011621.p1	9.886	+	TSC_hg19_v1_chr17_-_41910537 AK309045 AK299535 AK313045 AK311368 BC035833 BC025743 BC047017 NM_001932	-13159	-	BC056865 TSC_hg19_v1_chr17_-_41910234	-13574	-	BC054872 BC070324 NM_001136483 BC146971 AK125817	-65971	+	AK298112 AK309938 NM_001168322 NM_001168323 NM_001168324 NM_145273 AF427619 AF427620 BC025395 AY358364 CU692992	764	+	TSC_hg19_v1_chr17_-_41977993 AK299321 CR936598	54195	-	AL136554 X82895 TSC_hg19_v1_chr17_-_41984895 AK299518 AK223560 AK294564 AK299286	61110	-	AK309045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##AK299535|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##AK313045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##AK311368|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC035833|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC025743|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC047017|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##NM_001932|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC056865|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC054872|C17orf105|284067|chromosome 17 open reading frame 105##BC070324|C17orf105|284067|chromosome 17 open reading frame 105##NM_001136483|C17orf105|284067|chromosome 17 open reading frame 105##BC146971|C17orf105|284067|chromosome 17 open reading frame 105##AK125817|C17orf105|284067|chromosome 17 open reading frame 105##AK298112|CD300LG|146894|CD300 molecule-like family member g##AK309938|CD300LG|146894|CD300 molecule-like family member g##NM_001168322|CD300LG|146894|CD300 molecule-like family member g##NM_001168323|CD300LG|146894|CD300 molecule-like family member g##NM_001168324|CD300LG|146894|CD300 molecule-like family member g##NM_145273|CD300LG|146894|CD300 molecule-like family member g##AF427619|CD300LG|146894|CD300 molecule-like family member g##AF427620|CD300LG|146894|CD300 molecule-like family member g##BC025395|CD300LG|146894|CD300 molecule-like family member g##AY358364|CD300LG|146894|CD300 molecule-like family member g##AK299321|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##CR936598|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AL136554|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299518|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK223560|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK294564|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299286|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	0.049283	
chr21	43030635	43030788	reg1011682.p1	9.886	+	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	-150628	-	TSC_hg19_v1_chr21_-_42880078 AF329454 EU090249 HM245389 HM245390	-150634	-	AK291813 TSC_hg19_v1_chr21_-_42880030 AK296860 NM_001135099 BC051839 AF270487 BC035623	-150724	-	TSC_hg19_v1_chr21_-_43187213 EU832165 EU832259 BC035755 BC110617 BC110618 AB047783 AJ278016 NM_020639	156511	-	AK027424 TSC_hg19_v1_chr21_-_43187270	156556	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	268787	-	BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2##AF329454|TMPRSS2|7113|transmembrane protease, serine 2##EU090249|TMPRSS2|7113|transmembrane protease, serine 2##HM245389|TMPRSS2|7113|transmembrane protease, serine 2##HM245390|TMPRSS2|7113|transmembrane protease, serine 2##AK291813|TMPRSS2|7113|transmembrane protease, serine 2##AK296860|TMPRSS2|7113|transmembrane protease, serine 2##NM_001135099|TMPRSS2|7113|transmembrane protease, serine 2##BC051839|TMPRSS2|7113|transmembrane protease, serine 2##AF270487|TMPRSS2|7113|transmembrane protease, serine 2##BC035623|TMPRSS2|7113|transmembrane protease, serine 2##EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4##NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15	0.865402	CTCF.p2:6:0.865
chr3	108196526	108196639	reg1011515.p1	9.886	+	BC035971 NM_007072	-175251	+	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	-181181	+	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	-255290	-	AB023217 NM_014981	51586	-	AB463087 AM393250 HQ258525 BC082961 TSC_hg19_v1_chr3_-_108308269 BC130564 BC136371 BC063433 AL713689 AF334474 AK056933 AK308315	111678	-	NM_014648 TSC_hg19_v1_chr3_+_108308395	111783	+	BC035971|HHLA2|11148|HERV-H LTR-associating 2##NM_007072|HHLA2|11148|HERV-H LTR-associating 2##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AB023217|MYH15|22989|myosin, heavy chain 15##NM_014981|MYH15|22989|myosin, heavy chain 15##AM393250|KIAA1524|57650|KIAA1524##BC082961|KIAA1524|57650|KIAA1524##BC130564|KIAA1524|57650|KIAA1524##BC136371|KIAA1524|57650|KIAA1524##BC063433|KIAA1524|57650|KIAA1524##AL713689|KIAA1524|57650|KIAA1524##AF334474|KIAA1524|57650|KIAA1524##AK056933|KIAA1524|57650|KIAA1524##AK308315|KIAA1524|57650|KIAA1524##NM_014648|DZIP3|9666|DAZ interacting protein 3, zinc finger	0.990228	CTCF.p2:9:0.990
chr1	30265988	30266092	reg1010901.p1	9.885	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-702992	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-708593	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-708660	-	TSC_hg19_v1_chr1_+_31191648 AK057725	925591	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	930392	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	964592	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	0.989173	CTCF.p2:4:0.989
chr15	100890435	100890563	reg1012309.p3	9.885	+	AB527357 AJ315735 NM_139057	-8356	-	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-616865	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-616895	-	BC034500 BC034970 NM_178842	194398	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	251910	-	NM_024708 NM_198243 TSC_hg19_v1_chr15_+_101142810 AK289860 BC063581 AF451994 AK026204 AK222958 AK222974 BC025252	252296	+	AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)##NM_024708|ASB7|140460|ankyrin repeat and SOCS box containing 7##NM_198243|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK289860|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC063581|ASB7|140460|ankyrin repeat and SOCS box containing 7##AF451994|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK026204|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222958|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222974|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC025252|ASB7|140460|ankyrin repeat and SOCS box containing 7	0.994235	CTCF.p2:5:0.994
chr7	106300684	106300784	reg1004144.p2	9.885	+	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	-375211	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	-375372	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	-547719	-	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	769	-	TSC_hg19_v1_chr7_+_106505701 AK292684	204979	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	205040	+	BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1##AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74##AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	0.0	
chr1	112298250	112298408	reg1012695.p2	9.884	+	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	-110	+	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	-16374	-	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	-135862	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	106	-	TSC_hg19_v1_chr1_+_112298524 AK301697 AK001506 BC031062 BC011556 AF106019 AF155803 AK314312 DQ892249 DQ895449 CU679958	220	+	AY863198 AF120491 NM_004980 NM_172198	233393	-	NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B##NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B##AK301697|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK001506|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC031062|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC011556|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF106019|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF155803|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK314312|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ892249|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ895449|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF120491|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_004980|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_172198|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3	1.150534	CTCF.p2:-30:0.999
chr11	3071193	3071329	reg1012164.p2	9.884	+	TSC_hg19_v1_chr11_-_3013610 NM_005969 U77456 AK312599	-57662	-	AK316324 TSC_hg19_v1_chr11_-_3013560	-57706	-	TSC_hg19_v1_chr11_-_3013522 AK299515	-57736	-	BT009913 CU678270 DQ890773 AK308005 TSC_hg19_v1_chr11_-_3078625 AB208814 AF288206 AF288207 AK222614 AK296763 AK131221 AK096313 AK295371 AK298514 AK302644 BX647906 AK289432 BC002880 NM_001014437 NM_001194997 NM_001751 NM_139273	7377	-	AK301003 TSC_hg19_v1_chr11_-_3147850	76582	-	TSC_hg19_v1_chr11_-_3186504 BC032646 BC039579 AF392453 AL136918	115228	-	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4##U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4##BT009913|CARS|833|cysteinyl-tRNA synthetase##DQ890773|CARS|833|cysteinyl-tRNA synthetase##AK308005|CARS|833|cysteinyl-tRNA synthetase##AB208814|CARS|833|cysteinyl-tRNA synthetase##AF288206|CARS|833|cysteinyl-tRNA synthetase##AF288207|CARS|833|cysteinyl-tRNA synthetase##AK222614|CARS|833|cysteinyl-tRNA synthetase##AK296763|CARS|833|cysteinyl-tRNA synthetase##AK131221|CARS|833|cysteinyl-tRNA synthetase##AK096313|CARS|833|cysteinyl-tRNA synthetase##AK295371|CARS|833|cysteinyl-tRNA synthetase##AK298514|CARS|833|cysteinyl-tRNA synthetase##AK302644|CARS|833|cysteinyl-tRNA synthetase##BX647906|CARS|833|cysteinyl-tRNA synthetase##AK289432|CARS|833|cysteinyl-tRNA synthetase##BC002880|CARS|833|cysteinyl-tRNA synthetase##NM_001014437|CARS|833|cysteinyl-tRNA synthetase##NM_001194997|CARS|833|cysteinyl-tRNA synthetase##NM_001751|CARS|833|cysteinyl-tRNA synthetase##NM_139273|CARS|833|cysteinyl-tRNA synthetase##AK301003|OSBPL5|114879|oxysterol binding protein-like 5##BC032646|OSBPL5|114879|oxysterol binding protein-like 5##BC039579|OSBPL5|114879|oxysterol binding protein-like 5##AF392453|OSBPL5|114879|oxysterol binding protein-like 5##AL136918|OSBPL5|114879|oxysterol binding protein-like 5	0.0	
chr1	167525486	167525605	reg1011209.p2	9.884	+	TSC_hg19_v1_chr1_-_167523043 NM_003851	-2482	-	DQ891131 DQ894310 AB463481 AY359071 BC006786 BC008628 TSC_hg19_v1_chr1_-_167523000 AK130006 AK315497 AK075375 AK095456 AF084523	-2554	-	AB590419 CU693020 DQ893778 EU176191 X55510 X55511 X55512 BC025703 AK128376 AK313946 J04132 AK223325 NM_000734 NM_198053	-37772	-	AF545852 TSC_hg19_v1_chr1_+_167599495 NM_052862 AK130798	73868	+	TSC_hg19_v1_chr1_+_167599557 AL137762 BC101536 BC101562 BC143428	74024	+	TSC_hg19_v1_chr1_+_167691226 NM_001146191 NM_003953 NM_024569 AK297112 AK075334 AK307250 AK291249 AY359019 AF181660 AF478447 BC000984 BC007881 AF095727 AF087020 AF092425 AF095726 AK315546 AB527648 AF239756 BT019542 CR542160 HQ447352	165783	+	NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ893778|CD247|919|CD247 molecule##EU176191|CD247|919|CD247 molecule##X55510|CD247|919|CD247 molecule##X55511|CD247|919|CD247 molecule##X55512|CD247|919|CD247 molecule##BC025703|CD247|919|CD247 molecule##AK128376|CD247|919|CD247 molecule##AK313946|CD247|919|CD247 molecule##J04132|CD247|919|CD247 molecule##AK223325|CD247|919|CD247 molecule##NM_000734|CD247|919|CD247 molecule##NM_198053|CD247|919|CD247 molecule##AF545852|RCSD1|92241|RCSD domain containing 1##NM_052862|RCSD1|92241|RCSD domain containing 1##AL137762|RCSD1|92241|RCSD domain containing 1##BC101536|RCSD1|92241|RCSD domain containing 1##BC101562|RCSD1|92241|RCSD domain containing 1##BC143428|RCSD1|92241|RCSD domain containing 1##NM_001146191|MPZL1|9019|myelin protein zero-like 1##NM_003953|MPZL1|9019|myelin protein zero-like 1##NM_024569|MPZL1|9019|myelin protein zero-like 1##AK297112|MPZL1|9019|myelin protein zero-like 1##AK075334|MPZL1|9019|myelin protein zero-like 1##AK307250|MPZL1|9019|myelin protein zero-like 1##AK291249|MPZL1|9019|myelin protein zero-like 1##AY359019|MPZL1|9019|myelin protein zero-like 1##AF181660|MPZL1|9019|myelin protein zero-like 1##AF478447|MPZL1|9019|myelin protein zero-like 1##BC000984|MPZL1|9019|myelin protein zero-like 1##BC007881|MPZL1|9019|myelin protein zero-like 1##AF095727|MPZL1|9019|myelin protein zero-like 1##AF087020|MPZL1|9019|myelin protein zero-like 1##AF092425|MPZL1|9019|myelin protein zero-like 1##AF095726|MPZL1|9019|myelin protein zero-like 1##AK315546|MPZL1|9019|myelin protein zero-like 1##AF239756|MPZL1|9019|myelin protein zero-like 1##BT019542|MPZL1|9019|myelin protein zero-like 1##CR542160|MPZL1|9019|myelin protein zero-like 1##HQ447352|MPZL1|9019|myelin protein zero-like 1	0.999956	CTCF.p2:-7:1.000
chr11	83531107	83531255	reg1013891.p1	9.884	+	AK299778 CR933674 NM_001142702	-137730	-	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	-533776	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	-534148	-	AK294375 AK126776 AK295624 NM_001142700	453095	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	497200	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	1103051	-	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)	0.990941	CTCF.p2:10:0.991
chr10	91186154	91186274	reg1010823.p1	9.883	+	U34605 TSC_hg19_v1_chr10_+_91174502 AK312358 AK293346	-11726	+	TSC_hg19_v1_chr10_+_91174324 NM_012420 BC025786	-11871	+	NM_001548 BC007091 AK314588 AK308688 X03557	-33851	+	CR936657 AK127303 NM_213606	109097	-	AF355198 AY027662 AY027663 NM_138316 NM_148978	217424	-	TSC_hg19_v1_chr10_-_91404973 AK125428	218729	-	U34605|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK312358|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK293346|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##NM_012420|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##BC025786|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##NM_001548|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##BC007091|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK314588|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK308688|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##X03557|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##CR936657|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##AK127303|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##NM_213606|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##AF355198|PANK1|53354|pantothenate kinase 1##AY027662|PANK1|53354|pantothenate kinase 1##AY027663|PANK1|53354|pantothenate kinase 1##NM_138316|PANK1|53354|pantothenate kinase 1##NM_148978|PANK1|53354|pantothenate kinase 1##AK125428|PANK1|53354|pantothenate kinase 1	0.996363	CTCF.p2:-15:0.996
chr20	61439757	61439884	reg1011438.p2	9.883	+	TSC_hg19_v1_chr20_+_61436186 NM_007346 AK314696 AK022234 AF109134 BC008768 BC014137 CU680798 DQ892943 EU176723 BC032666	-3627	+	AK001776 NM_018270 TSC_hg19_v1_chr20_+_61427832 BC014235 BC009889 BC018841 AB085682 AB463516	-11973	+	TSC_hg19_v1_chr20_+_61340165 NM_002531 X70070	-99644	+	TSC_hg19_v1_chr20_+_61448401 BC011705 NM_001853 DQ892946 DQ896194 L41162	8583	+	NM_080750	36655	+	AF070992 AB012124 BC065520 BC046933 NM_006602 TSC_hg19_v1_chr20_-_61493138	53236	-	NM_007346|OGFR|11054|opioid growth factor receptor##AK314696|OGFR|11054|opioid growth factor receptor##AK022234|OGFR|11054|opioid growth factor receptor##AF109134|OGFR|11054|opioid growth factor receptor##BC008768|OGFR|11054|opioid growth factor receptor##BC014137|OGFR|11054|opioid growth factor receptor##DQ892943|OGFR|11054|opioid growth factor receptor##EU176723|OGFR|11054|opioid growth factor receptor##BC032666|OGFR|11054|opioid growth factor receptor##AK001776|C20orf20|55257|chromosome 20 open reading frame 20##NM_018270|C20orf20|55257|chromosome 20 open reading frame 20##BC014235|C20orf20|55257|chromosome 20 open reading frame 20##BC009889|C20orf20|55257|chromosome 20 open reading frame 20##BC018841|C20orf20|55257|chromosome 20 open reading frame 20##AB085682|C20orf20|55257|chromosome 20 open reading frame 20##NM_002531|NTSR1|4923|neurotensin receptor 1 (high affinity)##X70070|NTSR1|4923|neurotensin receptor 1 (high affinity)##BC011705|COL9A3|1299|collagen, type IX, alpha 3##NM_001853|COL9A3|1299|collagen, type IX, alpha 3##DQ892946|COL9A3|1299|collagen, type IX, alpha 3##DQ896194|COL9A3|1299|collagen, type IX, alpha 3##L41162|COL9A3|1299|collagen, type IX, alpha 3##NM_080750|DPH3P1|100132911|DPH3, KTI11 homolog (S. cerevisiae) pseudogene 1##AF070992|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##AB012124|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC065520|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC046933|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##NM_006602|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)	0.997938	CTCF.p2:-10:0.998
chr8	65294773	65294889	reg1010581.p1	9.883	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-1213631	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-1213687	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-1296204	-	NM_152414 AK293979	198027	+	TSC_hg19_v1_chr8_+_65493611 AK091333	198833	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	416448	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.713716	CTCF.p2:13:0.714
chr8	78059817	78059932	reg1014837.p1	9.883	+	NM_001172086 NM_001172087	-146595	-	BC000661 BC093043 TSC_hg19_v1_chr8_-_77912318 BC005375 M85038 AK312997 M86852 NM_000318 NM_001079867	-147465	-	AK131399 TSC_hg19_v1_chr8_+_77765961	-293985	+	NM_006823 NM_181839 S76965	1368461	+	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	1518446	+	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	1657774	-	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2##NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2##BC000661|PEX2|5828|peroxisomal biogenesis factor 2##BC093043|PEX2|5828|peroxisomal biogenesis factor 2##BC005375|PEX2|5828|peroxisomal biogenesis factor 2##M85038|PEX2|5828|peroxisomal biogenesis factor 2##AK312997|PEX2|5828|peroxisomal biogenesis factor 2##M86852|PEX2|5828|peroxisomal biogenesis factor 2##NM_000318|PEX2|5828|peroxisomal biogenesis factor 2##NM_001079867|PEX2|5828|peroxisomal biogenesis factor 2##AK131399|ZFHX4|79776|zinc finger homeobox 4##NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7	0.873251	CTCF.p2:0:0.873
chr9	34548120	34548249	reg1011977.p1	9.883	+	TSC_hg19_v1_chr9_-_34522975 BC022101 NM_198573	-25180	-	NM_012144 BC030583 AK290696 AF091619 AK314639 AK303937 AK302186 AK302499 DQ890609 EU176231	-89278	+	TSC_hg19_v1_chr9_-_34458569 AK299882 AK096350 AK123887 AK294054 BC041009 NM_001184940 NM_001184941 NM_001184942 NM_001184943 NM_001184945 NM_147202	-89657	-	TSC_hg19_v1_chr9_-_34589723 BC001492 M73238 NM_001842 NM_147164	41555	-	NM_001207011 TSC_hg19_v1_chr9_-_34590150	41966	-	BC032136 NM_148178 NM_148179	63908	-	BC022101|ENHO|375704|energy homeostasis associated##NM_198573|ENHO|375704|energy homeostasis associated##NM_012144|DNAI1|27019|dynein, axonemal, intermediate chain 1##BC030583|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK290696|DNAI1|27019|dynein, axonemal, intermediate chain 1##AF091619|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK314639|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK303937|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK302186|DNAI1|27019|dynein, axonemal, intermediate chain 1##DQ890609|DNAI1|27019|dynein, axonemal, intermediate chain 1##EU176231|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK299882|C9orf25|203259|chromosome 9 open reading frame 25##AK096350|C9orf25|203259|chromosome 9 open reading frame 25##AK123887|C9orf25|203259|chromosome 9 open reading frame 25##AK294054|C9orf25|203259|chromosome 9 open reading frame 25##BC041009|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184940|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184941|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184942|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184943|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184945|C9orf25|203259|chromosome 9 open reading frame 25##NM_147202|C9orf25|203259|chromosome 9 open reading frame 25##BC001492|CNTFR|1271|ciliary neurotrophic factor receptor##M73238|CNTFR|1271|ciliary neurotrophic factor receptor##NM_001842|CNTFR|1271|ciliary neurotrophic factor receptor##NM_147164|CNTFR|1271|ciliary neurotrophic factor receptor##NM_001207011|CNTFR|1271|ciliary neurotrophic factor receptor##BC032136|C9orf23|138716|chromosome 9 open reading frame 23##NM_148178|C9orf23|138716|chromosome 9 open reading frame 23##NM_148179|C9orf23|138716|chromosome 9 open reading frame 23	0.427987	CTCF.p2:-4:0.428
chr11	131449857	131449964	reg1013095.p1	9.882	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-209441	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-663522	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-663565	-	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	330714	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	331429	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	1363104	-	NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.132837	
chr1	145138973	145139093	reg1011562.p1	9.882	+	TSC_hg19_v1_chr1_+_145096519 CU674670 DQ892584 DQ895801	-42501	+	TSC_hg19_v1_chr1_+_145096446 NM_004892 AK289875 BC001364 AF047442	-42597	+	TSC_hg19_v1_chr1_-_145076026 CU692996 AF086451 BC110294 BC152553 BC025406 NM_022359	-63123	-	TSC_hg19_v1_chr1_+_145209107 NM_203458 BC010154 AK075065 BC090943 BC019835 AK092351 AK098372 AX747492 BC065219 AK293876 BC084572	70088	+	AY894562 AY894570 NM_001039703	154268	+	NM_145277 NM_202004 NM_213652 NM_213653 AK223575 AK092682 AK315852 AX747669 BC017926 AK096905 AK290831 AK292742 AK092692 AK124273 AX747673 BC085604	274230	+	DQ892584|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##DQ895801|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##NM_004892|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AK289875|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##BC001364|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AF047442|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AF086451|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC152553|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC025406|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_022359|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_203458|NOTCH2NL|388677|notch 2 N-terminal like##BC010154|NOTCH2NL|388677|notch 2 N-terminal like##AK075065|NOTCH2NL|388677|notch 2 N-terminal like##BC090943|NOTCH2NL|388677|notch 2 N-terminal like##BC019835|NOTCH2NL|388677|notch 2 N-terminal like##BC065219|NOTCH2NL|388677|notch 2 N-terminal like##BC084572|NOTCH2NL|388677|notch 2 N-terminal like##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8##NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10##NM_145277|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_202004|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213652|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213653|HFE2|148738|hemochromatosis type 2 (juvenile)##AK223575|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092682|HFE2|148738|hemochromatosis type 2 (juvenile)##AK315852|HFE2|148738|hemochromatosis type 2 (juvenile)##BC017926|HFE2|148738|hemochromatosis type 2 (juvenile)##AK096905|HFE2|148738|hemochromatosis type 2 (juvenile)##AK290831|HFE2|148738|hemochromatosis type 2 (juvenile)##AK292742|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092692|HFE2|148738|hemochromatosis type 2 (juvenile)##AK124273|HFE2|148738|hemochromatosis type 2 (juvenile)##BC085604|HFE2|148738|hemochromatosis type 2 (juvenile)	0.816289	CTCF.p2:4:0.816
chr1	21835654	21835747	reg1009214.p1	9.882	+	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	-69018	+	X98272 TSC_hg19_v1_chr1_-_21671998 NM_001113348	-163720	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	-218766	-	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	159	+	TSC_hg19_v1_chr1_+_21835918 AK295608 AK312667 AK298085 BC021289 BC066116 BC090861 AB011406 AH007388 X95994 AK293184 BC110909	232	+	AB003930 TSC_hg19_v1_chr1_-_21949064	113337	-	AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##X98272|ECE1|1889|endothelin converting enzyme 1##NM_001113348|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK295608|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK312667|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK298085|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC021289|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC066116|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC090861|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB011406|ALPL|249|alkaline phosphatase, liver/bone/kidney##X95994|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK293184|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC110909|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein	0.966159	CTCF.p2:38:0.966
chr17	41089866	41089980	reg1012080.p1	9.882	+	AK303771 NM_000151 U01120 TSC_hg19_v1_chr17_+_41052818 AK313982 BC020700 BC130478 BC136369 AB463690 HQ258400	-37070	+	AK025727 TSC_hg19_v1_chr17_+_41006139	-83803	+	CU690716 TSC_hg19_v1_chr17_+_41003393	-86547	+	TSC_hg19_v1_chr17_-_41116472 AK309477	26558	-	BC004172 BC019324 NM_025267 AK056965 AK094084 TSC_hg19_v1_chr17_-_41132133	42153	-	AK295447 NM_001136042 NM_001142653 NM_001142654	42621	-	AK303771|G6PC|2538|glucose-6-phosphatase, catalytic subunit##NM_000151|G6PC|2538|glucose-6-phosphatase, catalytic subunit##U01120|G6PC|2538|glucose-6-phosphatase, catalytic subunit##AK313982|G6PC|2538|glucose-6-phosphatase, catalytic subunit##BC130478|G6PC|2538|glucose-6-phosphatase, catalytic subunit##BC136369|G6PC|2538|glucose-6-phosphatase, catalytic subunit##HQ258400|G6PC|2538|glucose-6-phosphatase, catalytic subunit##AK025727|AOC3|8639|amine oxidase, copper containing 3 (vascular adhesion protein 1)##AK309477|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##BC004172|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##BC019324|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##NM_025267|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##AK056965|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##AK094084|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##AK295447|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##NM_001136042|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##NM_001142653|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##NM_001142654|AARSD1|80755|alanyl-tRNA synthetase domain containing 1	0.926785	CTCF.p2:20:0.927
chr3	187396809	187396909	reg1001422.p1	9.882	+	BC032625 AK312177 TSC_hg19_v1_chr3_-_187388181 NM_001048	-8707	-	BC013161 NM_022147 AJ251832 AY562238 DQ891046 DQ894225	-310661	+	BC106945 BC106946 TSC_hg19_v1_chr3_-_187009489 AK291686 AK129893 AK304334 AK300663 BX647237 AK291157 CR749615 BC039724 NM_001031849 NM_001879 NM_139125	-387220	-	BC068081 NM_001004312	23485	-	EU139066 NM_001134738	55822	-	S67779 NM_001130845	57406	-	BC032625|SST|6750|somatostatin##AK312177|SST|6750|somatostatin##NM_001048|SST|6750|somatostatin##BC013161|RTP4|64108|receptor (chemosensory) transporter protein 4##NM_022147|RTP4|64108|receptor (chemosensory) transporter protein 4##AJ251832|RTP4|64108|receptor (chemosensory) transporter protein 4##AY562238|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ891046|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ894225|RTP4|64108|receptor (chemosensory) transporter protein 4##BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC068081|RTP2|344892|receptor (chemosensory) transporter protein 2##NM_001004312|RTP2|344892|receptor (chemosensory) transporter protein 2##EU139066|BCL6|604|B-cell CLL/lymphoma 6##NM_001134738|BCL6|604|B-cell CLL/lymphoma 6##S67779|BCL6|604|B-cell CLL/lymphoma 6##NM_001130845|BCL6|604|B-cell CLL/lymphoma 6	0.993739	CTCF.p2:6:0.994
chr5	135509859	135509982	reg1014013.p1	9.882	+	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-41336	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-41391	+	TSC_hg19_v1_chr5_+_135364731 AB590111 DQ892178 EU176690 CU678832 BT009820	-145186	+	NM_001167576 NM_001167577 NM_020389	191243	-	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	1324321	-	TSC_hg19_v1_chr5_-_136834420 AK094489	1324507	-	AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ892178|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##EU176690|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BT009820|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.312018	CTCF.p2:10:0.312
chr6	151136372	151136503	reg1011460.p2	9.882	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	-215417	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	-446279	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-672196	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	50395	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	50484	+	TSC_hg19_v1_chr6_+_151187064 AL117452	50664	+	NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AL117452|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.951485	CTCF.p2:20:0.951
chr9	4750159	4750299	reg1014177.p1	9.882	+	AF183419 NM_001199853	-8187	-	NM_001199855	-8431	-	TSC_hg19_v1_chr9_-_4741309 NM_001199852 NM_016282	-8876	-	NM_005772 TSC_hg19_v1_chr9_+_4792833	42604	+	TSC_hg19_v1_chr9_+_4792936 AK022904 BC001025 AK225872	42694	+	TSC_hg19_v1_chr9_+_4792995 AJ276894 EU831474 EU831561 AF067172	42814	+	AF183419|AK3|50808|adenylate kinase 3##NM_001199853|AK3|50808|adenylate kinase 3##NM_001199855|AK3|50808|adenylate kinase 3##NM_001199852|AK3|50808|adenylate kinase 3##NM_016282|AK3|50808|adenylate kinase 3##NM_005772|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK022904|RCL1|10171|RNA terminal phosphate cyclase-like 1##BC001025|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK225872|RCL1|10171|RNA terminal phosphate cyclase-like 1##AJ276894|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831474|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831561|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF067172|RCL1|10171|RNA terminal phosphate cyclase-like 1	0.242145	CTCF.p2:-8:0.242
chr19	45406985	45407090	reg1011611.p1	9.881	+	TSC_hg19_v1_chr19_+_45394661 AF316402 DQ892938 DQ896187 CU674884 AF316401	-12311	+	TSC_hg19_v1_chr19_+_45394570 BC017224	-12466	+	TSC_hg19_v1_chr19_+_45394522 BC001779 BC012134 BC006413	-12497	+	TSC_hg19_v1_chr19_+_45409052 NM_000041 AK308546 AK314898 M12529 K00396 BC003557 Z70760	2015	+	AF308154 AF308155 BC055093 AK225971 TSC_hg19_v1_chr19_+_45417581	10541	+	NM_001645 TSC_hg19_v1_chr19_+_45417961 AK312036	10907	+	AF316402|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##DQ892938|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##DQ896187|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##AF316401|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##BC017224|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##BC001779|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##BC012134|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##BC006413|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##NM_000041|APOE|348|apolipoprotein E##AK314898|APOE|348|apolipoprotein E##M12529|APOE|348|apolipoprotein E##K00396|APOE|348|apolipoprotein E##BC003557|APOE|348|apolipoprotein E##Z70760|APOE|348|apolipoprotein E##BC055093|APOC1|341|apolipoprotein C-I##AK225971|APOC1|341|apolipoprotein C-I##NM_001645|APOC1|341|apolipoprotein C-I##AK312036|APOC1|341|apolipoprotein C-I	0.997433	CTCF.p2:0:0.997
chr3	19584858	19584980	reg1014599.p1	9.881	+	AK295633 AY053503 NM_144633 AB209053 AK309034	-394915	+	BC001744 NM_001131010	-1104686	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	-1118122	-	BC028198 AK097644 NM_144715	390769	-	TSC_hg19_v1_chr3_+_19988586 NM_004162	403770	+	TSC_hg19_v1_chr3_+_19988870 AK312618 BC018288 AK309287 AK295992 BC001267	403982	+	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC028198|EFHB|151651|EF-hand domain family, member B##AK097644|EFHB|151651|EF-hand domain family, member B##NM_144715|EFHB|151651|EF-hand domain family, member B##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family##AK312618|RAB5A|5868|RAB5A, member RAS oncogene family##BC018288|RAB5A|5868|RAB5A, member RAS oncogene family##AK309287|RAB5A|5868|RAB5A, member RAS oncogene family##AK295992|RAB5A|5868|RAB5A, member RAS oncogene family##BC001267|RAB5A|5868|RAB5A, member RAS oncogene family	0.883649	CTCF.p2:12:0.884
chr8	84737296	84737441	reg1013616.p1	9.881	+	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	-1982895	-	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-2092609	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-2103842	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	358091	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	358175	+	TSC_hg19_v1_chr8_+_85095702 AK095026	358367	+	AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like	0.994784	CTCF.p2:4:0.995
chr4	122647957	122648080	reg1012812.p1	9.879	+	TSC_hg19_v1_chr4_-_122618148 J03745 AK312644 NM_001154	-29862	-	TSC_hg19_v1_chr4_-_122618136 AK297909 M19384 BC018671 BC032093	-29885	-	BC012804 BC012822 TSC_hg19_v1_chr4_-_122618109 BC004993 X12454 D00172 M21731	-29906	-	BC059365 TSC_hg19_v1_chr4_-_122686341 BC047657 NM_152399 AK310583	38337	-	NM_001034194 NM_005033 TSC_hg19_v1_chr4_+_122722477 AK301967 AJ505989 AJ517294 BC142978 AK307548 BC012371 BC140038 BC140039	74505	+	CR407692 TSC_hg19_v1_chr4_-_122744913 BC104783 BC104787 X51688	96833	-	J03745|ANXA5|308|annexin A5##AK312644|ANXA5|308|annexin A5##NM_001154|ANXA5|308|annexin A5##AK297909|ANXA5|308|annexin A5##M19384|ANXA5|308|annexin A5##BC018671|ANXA5|308|annexin A5##BC032093|ANXA5|308|annexin A5##BC012804|ANXA5|308|annexin A5##BC012822|ANXA5|308|annexin A5##BC004993|ANXA5|308|annexin A5##X12454|ANXA5|308|annexin A5##D00172|ANXA5|308|annexin A5##M21731|ANXA5|308|annexin A5##BC059365|TMEM155|132332|transmembrane protein 155##BC047657|TMEM155|132332|transmembrane protein 155##NM_152399|TMEM155|132332|transmembrane protein 155##AK310583|TMEM155|132332|transmembrane protein 155##NM_001034194|EXOSC9|5393|exosome component 9##NM_005033|EXOSC9|5393|exosome component 9##AK301967|EXOSC9|5393|exosome component 9##AJ505989|EXOSC9|5393|exosome component 9##AJ517294|EXOSC9|5393|exosome component 9##BC142978|EXOSC9|5393|exosome component 9##AK307548|EXOSC9|5393|exosome component 9##BC012371|EXOSC9|5393|exosome component 9##BC140038|EXOSC9|5393|exosome component 9##BC140039|EXOSC9|5393|exosome component 9##CR407692|CCNA2|890|cyclin A2##BC104783|CCNA2|890|cyclin A2##BC104787|CCNA2|890|cyclin A2##X51688|CCNA2|890|cyclin A2	0.448404	CTCF.p2:-1:0.448
chr10	113120193	113120302	reg1009877.p2	9.878	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	-283395	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-440867	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-440887	+	AB046780 TSC_hg19_v1_chr10_-_113933602	813314	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	823258	-	BC113497 BC113499 AF312827 HQ258194 NM_058222	923205	+	NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta	0.988741	CTCF.p2:15:0.970
chr12	55537171	55537303	reg1013664.p1	9.878	+	BC136988 NM_001005243	-13729	+	NM_021191 AK314136	-123467	+	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	-158735	-	AB529271 NM_001005280	77571	+	BC140754 NM_001005490	103789	+	NM_001005493	151778	-	BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_021191|NEUROD4|58158|neurogenic differentiation 4##AK314136|NEUROD4|58158|neurogenic differentiation 4##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748##NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7##BC140754|OR6C74|254783|olfactory receptor, family 6, subfamily C, member 74##NM_001005490|OR6C74|254783|olfactory receptor, family 6, subfamily C, member 74##NM_001005493|OR6C6|283365|olfactory receptor, family 6, subfamily C, member 6	0.999804	CTCF.p2:5:1.000
chr20	62273502	62273603	reg1010325.p1	9.878	+	TSC_hg19_v1_chr20_-_62258426 AK298927	-15115	-	AB033095 TSC_hg19_v1_chr20_-_62258409 BC036305 NM_012384	-15177	-	TSC_hg19_v1_chr20_-_62205593 AB232667 BC035130 AK023724 NM_001037335	-67964	-	DQ893121 DQ896397 BC047671 BC021084 BC032527 AF069709 BC056873 TSC_hg19_v1_chr20_-_62284781 AK074860 NM_015894 AK310010 BC009381 BC025234	11208	-	AF217795 NM_016434 NM_032957	15610	+	TSC_hg19_v1_chr20_+_62289667 AK302508 AK304798 AK299332 BC000673	16129	+	AK298927|GMEB2|26205|glucocorticoid modulatory element binding protein 2##AB033095|GMEB2|26205|glucocorticoid modulatory element binding protein 2##BC036305|GMEB2|26205|glucocorticoid modulatory element binding protein 2##NM_012384|GMEB2|26205|glucocorticoid modulatory element binding protein 2##AB232667|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC035130|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##AK023724|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##NM_001037335|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##DQ893121|STMN3|50861|stathmin-like 3##DQ896397|STMN3|50861|stathmin-like 3##BC047671|STMN3|50861|stathmin-like 3##BC032527|STMN3|50861|stathmin-like 3##AF069709|STMN3|50861|stathmin-like 3##BC056873|STMN3|50861|stathmin-like 3##AK074860|STMN3|50861|stathmin-like 3##NM_015894|STMN3|50861|stathmin-like 3##AK310010|STMN3|50861|stathmin-like 3##BC009381|STMN3|50861|stathmin-like 3##BC025234|STMN3|50861|stathmin-like 3##AF217795|RTEL1|51750|regulator of telomere elongation helicase 1##NM_016434|RTEL1|51750|regulator of telomere elongation helicase 1##NM_032957|RTEL1|51750|regulator of telomere elongation helicase 1##AK302508|RTEL1|51750|regulator of telomere elongation helicase 1##AK304798|RTEL1|51750|regulator of telomere elongation helicase 1##AK299332|RTEL1|51750|regulator of telomere elongation helicase 1	0.052779	
chr11	36766241	36766379	reg1013568.p1	9.877	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-146508	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-150206	+	NM_000448 M29474	-176742	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	3548284	-	AB046800 NM_020929	3549353	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	6567208	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.952019	CTCF.p2:2:0.952
chr12	14667295	14667419	reg1013868.p1	9.876	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	-129085	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	-148722	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-534371	-	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	53252	-	NM_024829 TSC_hg19_v1_chr12_-_14720806	53447	-	BC136544 BC136545 M73489 TSC_hg19_v1_chr12_-_14849534 S57551 AK310034 NM_004963	182128	-	AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1##NM_024829|PLBD1|79887|phospholipase B domain containing 1##BC136544|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##BC136545|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##M73489|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##S57551|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##AK310034|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##NM_004963|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)	0.949562	CTCF.p2:11:0.950
chr20	13242830	13242954	reg1012271.p1	9.876	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	-40469	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	-253251	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-1344335	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	376672	-	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	522649	-	TSC_hg19_v1_chr20_+_13765698 NM_001039375 NM_024120 AK289781 AK091060 AX746757 BC073158 CU687252 BC005984	522861	+	NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_001039375|C20orf7|79133|chromosome 20 open reading frame 7##NM_024120|C20orf7|79133|chromosome 20 open reading frame 7##AK289781|C20orf7|79133|chromosome 20 open reading frame 7##AK091060|C20orf7|79133|chromosome 20 open reading frame 7##BC073158|C20orf7|79133|chromosome 20 open reading frame 7##BC005984|C20orf7|79133|chromosome 20 open reading frame 7	0.925107	CTCF.p2:4:0.925
chr20	44642482	44642662	reg1005994.p1	9.876	+	TSC_hg19_v1_chr20_+_44637546 AK298246 AK301446 AK311648 AK313137 AK316145 J05070 NM_004994 AK303080 BC006093 DQ896791 EU176415 AB528343 CU675241	-5020	+	TSC_hg19_v1_chr20_-_44600992 AK296989	-41579	-	TSC_hg19_v1_chr20_-_44600828 AF395833 BC041331 BC142981 NM_022095	-41762	-	TSC_hg19_v1_chr20_+_44650321 NM_001134771	7748	+	TSC_hg19_v1_chr20_+_44657824 NM_020708 AK098371	15251	+	TSC_hg19_v1_chr20_+_44657861 AK289758 AK296331 AK294059 BC132668 BC132670 AK295096 AF208159 AB033002	15359	+	AK298246|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK301446|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK313137|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK316145|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##J05070|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##NM_004994|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK303080|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##BC006093|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##DQ896791|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##EU176415|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK296989|ZNF335|63925|zinc finger protein 335##AF395833|ZNF335|63925|zinc finger protein 335##BC041331|ZNF335|63925|zinc finger protein 335##BC142981|ZNF335|63925|zinc finger protein 335##NM_022095|ZNF335|63925|zinc finger protein 335##NM_001134771|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##NM_020708|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK098371|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK289758|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK296331|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK294059|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC132668|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC132670|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK295096|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AF208159|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AB033002|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5	0.197051	
chr21	9584892	9584996	reg1011429.p1	9.876	+	None	None	None	None	None	None	None	None	None	AK308254 AK314285 TSC_hg19_v1_chr21_-_10990898 AF007118 AF495908 AY219886 AY219887 AY219888 AL833345 BC028719 NM_199259 NM_199260 NM_199261	1405954	-	BC101132 BC101133 BC101134 BC107038 BC107039 BC113810 AF218570 AF339514 AF339515 AF339516 NM_181704 NM_182481 NM_182482 NM_182484 AF527550 AF527551 AF527553 NM_001187 U19180 BC017024 TSC_hg19_v1_chr21_-_11098961 AK292540 BC064647	1513955	-	AY172978 NM_174981 AY465173	5397555	+	AK308254|TPTE|7179|transmembrane phosphatase with tensin homology##AK314285|TPTE|7179|transmembrane phosphatase with tensin homology##AF007118|TPTE|7179|transmembrane phosphatase with tensin homology##AF495908|TPTE|7179|transmembrane phosphatase with tensin homology##AY219886|TPTE|7179|transmembrane phosphatase with tensin homology##AY219887|TPTE|7179|transmembrane phosphatase with tensin homology##AY219888|TPTE|7179|transmembrane phosphatase with tensin homology##AL833345|TPTE|7179|transmembrane phosphatase with tensin homology##BC028719|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199259|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199260|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199261|TPTE|7179|transmembrane phosphatase with tensin homology##BC101132|BAGE2|85319|B melanoma antigen family, member 2##BC101133|BAGE2|85319|B melanoma antigen family, member 2##BC101134|BAGE3|85318|B melanoma antigen family, member 3##BC107038|BAGE|574|B melanoma antigen##BC107039|BAGE|574|B melanoma antigen##BC113810|BAGE|574|B melanoma antigen##AF218570|BAGE2|85319|B melanoma antigen family, member 2##AF339514|BAGE3|85318|B melanoma antigen family, member 3##AF339515|BAGE4|85317|B melanoma antigen family, member 4##AF339516|BAGE5|85316|B melanoma antigen family, member 5##NM_181704|BAGE4|85317|B melanoma antigen family, member 4##NM_182481|BAGE3|85318|B melanoma antigen family, member 3##NM_182482|BAGE2|85319|B melanoma antigen family, member 2##NM_182484|BAGE5|85316|B melanoma antigen family, member 5##AF527550|BAGE|574|B melanoma antigen##AF527551|BAGE|574|B melanoma antigen##AF527553|BAGE|574|B melanoma antigen##NM_001187|BAGE|574|B melanoma antigen##U19180|BAGE|574|B melanoma antigen##AK292540|BAGE2|85319|B melanoma antigen family, member 2##AY172978|POTED|317754|POTE ankyrin domain family, member D##NM_174981|POTED|317754|POTE ankyrin domain family, member D##AY465173|POTEB|339010|POTE ankyrin domain family, member B	0.99859	CTCF.p2:20:0.999
chr2	202023172	202023297	reg1009827.p2	9.876	+	AF041459 NM_001202515	-18237	+	NM_001202518 AK304585 AF041462	-25512	+	TSC_hg19_v1_chr2_+_201983419 AK289913 AK315208	-39762	+	NM_001206524 NM_001206542 NM_001230 NM_032974 NM_032976 NM_032977	24386	+	TSC_hg19_v1_chr2_+_202047863 AK310746 U86214 AK304859 AK225475 AY690601 BC042844 U60519 AJ487678 AJ487679	24626	+	NM_001080124 NM_001228 NM_033355 NM_033358 AF422927 AF422928 BC010390 AK310630 BC017031 U60520 X98176	74991	+	AF041459|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202515|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202518|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK304585|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF041462|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK289913|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK315208|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001080124|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001228|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033355|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033358|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422927|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422928|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC010390|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310630|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC017031|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##U60520|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98176|CASP8|841|caspase 8, apoptosis-related cysteine peptidase	0.961766	CTCF.p2:15:0.962
chr3	36771107	36771247	reg1010515.p1	9.876	+	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	-349125	+	BC017805 NM_198399 BC066651 BC036548	-1048718	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	-1049981	+	NM_033403	10174	-	TSC_hg19_v1_chr3_-_36986546 NM_014831	215393	-	AB385383 CU687938 TSC_hg19_v1_chr3_-_37034574	263394	-	AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain##BC017805|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_198399|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC066651|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC036548|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_033403|DCLK3|85443|doublecortin-like kinase 3##NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1	0.802998	CTCF.p2:-33:0.803
chr7	41980470	41980621	reg1014333.p1	9.876	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-237860	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1805936	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1806014	+	NM_000168	296072	-	TSC_hg19_v1_chr7_-_42276797 AK308429	296250	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	971044	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.998422	CTCF.p2:-5:0.998
chr7	81099463	81099599	reg1014360.p1	9.876	+	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-550857	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-551097	-	HM217020 HM217021 HM217022 HM217023 HM217024 HM217025 HM217026 AB590184 CU678951 DQ893062 DQ896314 TSC_hg19_v1_chr7_+_80276126	-823484	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	299843	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	973315	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	973549	-	AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##HM217020|CD36|948|CD36 molecule (thrombospondin receptor)##HM217021|CD36|948|CD36 molecule (thrombospondin receptor)##HM217022|CD36|948|CD36 molecule (thrombospondin receptor)##HM217023|CD36|948|CD36 molecule (thrombospondin receptor)##HM217024|CD36|948|CD36 molecule (thrombospondin receptor)##HM217025|CD36|948|CD36 molecule (thrombospondin receptor)##HM217026|CD36|948|CD36 molecule (thrombospondin receptor)##DQ893062|CD36|948|CD36 molecule (thrombospondin receptor)##DQ896314|CD36|948|CD36 molecule (thrombospondin receptor)##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1	0.045851	
chr10	90746829	90746959	reg1013117.p1	9.875	+	J05192 X13839 BC017554 TSC_hg19_v1_chr10_-_90712531 AK300353 BC093052 AK300664 AK313294 NM_001613	-34350	-	TSC_hg19_v1_chr10_+_90640003 AK056086 BC010846 NM_020799	-106916	+	AX721211 NM_144590	-135191	-	NM_000043 NM_152871 NM_152872 BC012479 TSC_hg19_v1_chr10_+_90750342	3424	+	TSC_hg19_v1_chr10_+_90750599 AK290978 X63717 M67454 X83490 X83491 X83492 X83493 DQ894675 AY495076 CR450307 EU481974 FJ373045 FJ373046 FM246457 FM246458 FM246459 X89101 Z47993 Z47994 Z47995 Z66556 Z70519 Z70520	3614	+	TSC_hg19_v1_chr10_-_90751090 AY692464 NM_001141945	4156	-	J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta##X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK056086|STAMBPL1|57559|STAM binding protein-like 1##BC010846|STAMBPL1|57559|STAM binding protein-like 1##NM_020799|STAMBPL1|57559|STAM binding protein-like 1##NM_144590|ANKRD22|118932|ankyrin repeat domain 22##NM_000043|FAS|355|Fas (TNF receptor superfamily, member 6)##NM_152871|FAS|355|Fas (TNF receptor superfamily, member 6)##NM_152872|FAS|355|Fas (TNF receptor superfamily, member 6)##BC012479|FAS|355|Fas (TNF receptor superfamily, member 6)##AK290978|FAS|355|Fas (TNF receptor superfamily, member 6)##X63717|FAS|355|Fas (TNF receptor superfamily, member 6)##M67454|FAS|355|Fas (TNF receptor superfamily, member 6)##X83490|FAS|355|Fas (TNF receptor superfamily, member 6)##X83491|FAS|355|Fas (TNF receptor superfamily, member 6)##X83492|FAS|355|Fas (TNF receptor superfamily, member 6)##X83493|FAS|355|Fas (TNF receptor superfamily, member 6)##DQ894675|FAS|355|Fas (TNF receptor superfamily, member 6)##AY495076|FAS|355|Fas (TNF receptor superfamily, member 6)##CR450307|FAS|355|Fas (TNF receptor superfamily, member 6)##EU481974|FAS|355|Fas (TNF receptor superfamily, member 6)##FJ373045|FAS|355|Fas (TNF receptor superfamily, member 6)##FJ373046|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246457|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246458|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246459|FAS|355|Fas (TNF receptor superfamily, member 6)##X89101|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47993|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47994|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47995|FAS|355|Fas (TNF receptor superfamily, member 6)##Z66556|FAS|355|Fas (TNF receptor superfamily, member 6)##Z70519|FAS|355|Fas (TNF receptor superfamily, member 6)##Z70520|FAS|355|Fas (TNF receptor superfamily, member 6)##AY692464|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001141945|ACTA2|59|actin, alpha 2, smooth muscle, aorta	0.887878	CTCF.p2:13:0.888
chr1	33936194	33936311	reg1012834.p1	9.875	+	TSC_hg19_v1_chr1_-_33896604 AJ242730	-39644	-	AB527842 AJ419231 BC130630 BC144121 NM_198040	-95085	-	NM_004427 TSC_hg19_v1_chr1_-_33815501 U89278	-120744	-	NM_145238 AK131405 TSC_hg19_v1_chr1_+_33938251 AK290195 BC008827 BC011404	1999	+	AK097707 NM_145205	389823	+	TSC_hg19_v1_chr1_-_34630856 AB212622	694613	-	AJ242730|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AJ419231|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC130630|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC144121|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##NM_198040|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##NM_004427|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##U89278|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##NM_145238|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK131405|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK290195|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC008827|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC011404|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK097707|HMGB4|127540|high mobility group box 4##NM_145205|HMGB4|127540|high mobility group box 4##AB212622|CSMD2|114784|CUB and Sushi multiple domains 2	0.792696	CTCF.p2:12:0.793
chr19	16222163	16222289	reg1011453.p1	9.875	+	TSC_hg19_v1_chr19_+_16187330 X05276 BC002827 AK315076 AF310722 AF186109 BT019634	-34842	+	TSC_hg19_v1_chr19_+_16187306 BC067225	-34917	+	TSC_hg19_v1_chr19_+_16187304 BC037576 AK300136 AK307538 AK301285	-34941	+	TSC_hg19_v1_chr19_+_16222463 AK025165 NM_005370	248	+	TSC_hg19_v1_chr19_+_16222683 BC002977	390	+	AK293676 TSC_hg19_v1_chr19_+_16222706 X56741 AF498943 BT007184 CR536583 CR542274 DQ892523 DQ895735 AB209767	496	+	X05276|TPM4|7171|tropomyosin 4##BC002827|TPM4|7171|tropomyosin 4##AK315076|TPM4|7171|tropomyosin 4##AF186109|TPM4|7171|tropomyosin 4##BT019634|TPM4|7171|tropomyosin 4##BC067225|TPM4|7171|tropomyosin 4##BC037576|TPM4|7171|tropomyosin 4##AK300136|TPM4|7171|tropomyosin 4##AK307538|TPM4|7171|tropomyosin 4##AK301285|TPM4|7171|tropomyosin 4##AK025165|RAB8A|4218|RAB8A, member RAS oncogene family##NM_005370|RAB8A|4218|RAB8A, member RAS oncogene family##BC002977|RAB8A|4218|RAB8A, member RAS oncogene family##AK293676|RAB8A|4218|RAB8A, member RAS oncogene family##X56741|RAB8A|4218|RAB8A, member RAS oncogene family##AF498943|RAB8A|4218|RAB8A, member RAS oncogene family##BT007184|RAB8A|4218|RAB8A, member RAS oncogene family##CR536583|RAB8A|4218|RAB8A, member RAS oncogene family##CR542274|RAB8A|4218|RAB8A, member RAS oncogene family##DQ892523|RAB8A|4218|RAB8A, member RAS oncogene family##DQ895735|RAB8A|4218|RAB8A, member RAS oncogene family##AB209767|RAB8A|4218|RAB8A, member RAS oncogene family	0.889279	CTCF.p2:19:0.889
chrX	134831466	134831577	reg1013099.p1	9.875	+	TSC_hg19_v1_chrX_+_134654737 BC140715 AK308423	-176790	+	TSC_hg19_v1_chrX_+_134654584 BX648113 NM_182540 AK096544 AL833319	-176952	+	BC030620 TSC_hg19_v1_chrX_+_134555878 BC051704	-275647	+	AY743709 NM_001017417 BC140735 BC140926 BC144437 BC140913	15713	+	AK098689 AY743710 AY743712 NM_001017436 NM_152582 BC028711 BC140735 BC140926 BC144437	34738	+	AY743711 NM_001017435 BC028711 BC140735 BC140926 BC144437	52012	+	BC140715|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK308423|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BX648113|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##NM_182540|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK096544|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AL833319|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BC030620|LINC00086|399668|long intergenic non-protein coding RNA 86##BC051704|LINC00086|399668|long intergenic non-protein coding RNA 86##AY743709|CT45A1|541466|cancer/testis antigen family 45, member A1##NM_001017417|CT45A1|541466|cancer/testis antigen family 45, member A1##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1##AK098689|CT45A4|441520|cancer/testis antigen family 45, member A4##AY743710|CT45A2|728911|cancer/testis antigen family 45, member A2##AY743712|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_001017436|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_152582|CT45A2|728911|cancer/testis antigen family 45, member A2##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##AY743711|CT45A3|441519|cancer/testis antigen family 45, member A3##NM_001017435|CT45A3|441519|cancer/testis antigen family 45, member A3##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3	0.730814	CTCF.p2:30:0.731
chr13	45453698	45453840	reg1013065.p1	9.874	+	TSC_hg19_v1_chr13_-_45150604 AB082525 NM_001243799 NM_183422	-303119	-	AK091854 AX747223 TSC_hg19_v1_chr13_-_45150467 BC136475 BC136482	-303339	-	NM_001243798	-405333	-	TSC_hg19_v1_chr13_-_45563607 AB528019 AF159548 BC001436 AK314242 NM_012345	109826	-	TSC_hg19_v1_chr13_+_45563672 AK304669 BC017776 BC039586 NM_018559 AK292493 AF145122 BC032333 AB051491	109955	+	TSC_hg19_v1_chr13_+_45694638 NM_004128 AK291545	240845	+	AB082525|TSC22D1|8848|TSC22 domain family, member 1##NM_001243799|TSC22D1|8848|TSC22 domain family, member 1##NM_183422|TSC22D1|8848|TSC22 domain family, member 1##AK091854|TSC22D1|8848|TSC22 domain family, member 1##BC136475|TSC22D1|8848|TSC22 domain family, member 1##BC136482|TSC22D1|8848|TSC22 domain family, member 1##NM_001243798|TSC22D1|8848|TSC22 domain family, member 1##AF159548|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##BC001436|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AK314242|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##NM_012345|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AK304669|KIAA1704|55425|KIAA1704##BC017776|KIAA1704|55425|KIAA1704##BC039586|KIAA1704|55425|KIAA1704##NM_018559|KIAA1704|55425|KIAA1704##AK292493|KIAA1704|55425|KIAA1704##AF145122|KIAA1704|55425|KIAA1704##BC032333|KIAA1704|55425|KIAA1704##AB051491|KIAA1704|55425|KIAA1704##NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	0.983268	CTCF.p2:6:0.983
chr11	8588261	8588399	reg1009858.p2	9.873	+	BC069752 BC069793 M26682 NM_002315	-302978	-	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	-397767	-	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-485531	+	AK093251 AX748014 BC031231 NM_030906	27127	-	AK293193 TSC_hg19_v1_chr11_-_8615705	27373	-	TSC_hg19_v1_chr11_-_8615752 AK092720 AX747689 AK310754	27445	-	BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33##AK293193|STK33|65975|serine/threonine kinase 33##AK092720|STK33|65975|serine/threonine kinase 33##AK310754|STK33|65975|serine/threonine kinase 33	0.961764	CTCF.p2:11:0.962
chr12	3994810	3994934	reg1013626.p1	9.873	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-12372	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-132490	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-132604	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	388172	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	435519	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	493928	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.960184	CTCF.p2:-19:0.960
chr12	52320668	52320780	reg1012295.p1	9.872	+	NM_001077401 AK303331 L17075 BC042637 CU692110	-14540	+	NM_000020 Z22533 TSC_hg19_v1_chr12_+_52301290 AK298493	-19475	+	HM161905 TSC_hg19_v1_chr12_+_52300731 HM161906	-20013	+	TSC_hg19_v1_chr12_+_52345437 BC040531 NM_004302 NM_020328	24721	+	TSC_hg19_v1_chr12_+_52345493 AK299120 L10125 BC000254 AB384957 BT007072 CU674106 EU831986 EU832079 L10126 U14722 Z22536	24773	+	AK299496 NM_020327	26439	+	NM_001077401|ACVRL1|94|activin A receptor type II-like 1##AK303331|ACVRL1|94|activin A receptor type II-like 1##L17075|ACVRL1|94|activin A receptor type II-like 1##BC042637|ACVRL1|94|activin A receptor type II-like 1##NM_000020|ACVRL1|94|activin A receptor type II-like 1##Z22533|ACVRL1|94|activin A receptor type II-like 1##AK298493|ACVRL1|94|activin A receptor type II-like 1##HM161905|ACVRL1|94|activin A receptor type II-like 1##HM161906|ACVRL1|94|activin A receptor type II-like 1##BC040531|ACVR1B|91|activin A receptor, type IB##NM_004302|ACVR1B|91|activin A receptor, type IB##NM_020328|ACVR1B|91|activin A receptor, type IB##AK299120|ACVR1B|91|activin A receptor, type IB##L10125|ACVR1B|91|activin A receptor, type IB##BC000254|ACVR1B|91|activin A receptor, type IB##BT007072|ACVR1B|91|activin A receptor, type IB##EU831986|ACVR1B|91|activin A receptor, type IB##EU832079|ACVR1B|91|activin A receptor, type IB##L10126|ACVR1B|91|activin A receptor, type IB##U14722|ACVR1B|91|activin A receptor, type IB##Z22536|ACVR1B|91|activin A receptor, type IB##AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB	0.105365	
chr1	65289988	65290122	reg1014241.p1	9.872	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	-79256	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	-353537	+	BC029895 NM_152489	-620566	+	TSC_hg19_v1_chr1_-_65432181 BC062431 BC009079 NM_002227	141959	-	TSC_hg19_v1_chr1_-_65432203 BC111401	142173	-	TSC_hg19_v1_chr1_+_65613263 NM_203464 BC146653 BC016180 AK309057 BC066944 NM_001005353	323306	+	AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_020925|CACHD1|57685|cache domain containing 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##BC062431|JAK1|3716|Janus kinase 1##BC009079|JAK1|3716|Janus kinase 1##NM_002227|JAK1|3716|Janus kinase 1##BC111401|JAK1|3716|Janus kinase 1##NM_203464|AK4|205|adenylate kinase 4##BC146653|AK4|205|adenylate kinase 4##BC016180|AK4|205|adenylate kinase 4##AK309057|AK4|205|adenylate kinase 4##BC066944|AK4|205|adenylate kinase 4##NM_001005353|AK4|205|adenylate kinase 4	0.993441	CTCF.p2:-1:0.993
chr17	69469473	69469607	reg1013464.p1	9.872	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-1303844	+	BC033038 NM_170742	-1368546	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-1398110	+	TSC_hg19_v1_chr17_-_70116937 AL833139	647398	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	647619	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	647630	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.135155	
chr14	89133927	89134040	reg1011571.p2	9.871	+	NM_207662 BC027607 AF474376	-73230	+	AL834215 AY578062 NM_207661	-104293	+	TSC_hg19_v1_chr14_+_89029392 BX640716 AK304275 BC011793 AK021868	-104587	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	125227	-	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	157010	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	744793	-	NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##AL834215|ZC3H14|79882|zinc finger CCCH-type containing 14##AY578062|ZC3H14|79882|zinc finger CCCH-type containing 14##NM_207661|ZC3H14|79882|zinc finger CCCH-type containing 14##BX640716|ZC3H14|79882|zinc finger CCCH-type containing 14##AK304275|ZC3H14|79882|zinc finger CCCH-type containing 14##BC011793|ZC3H14|79882|zinc finger CCCH-type containing 14##AK021868|ZC3H14|79882|zinc finger CCCH-type containing 14##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3	0.991541	CTCF.p2:0:0.992
chr5	44863026	44863158	reg1014883.p1	9.871	+	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	-54065	+	AF508782 AB002097 AF411527 BC069561 CR541665 CR541688 GQ351295 HQ258011 NM_004465 U67918 BC105023 BC105021 BC143772	-474327	-	Z50101 AB385177 AM392664 AM393615 TSC_hg19_v1_chr5_+_43609371	-1253776	+	AF064876 TSC_hg19_v1_chr5_-_45695947	832799	-	AF488549 NM_021072	833127	-	AK300860 TSC_hg19_v1_chr5_-_49737200 BC059398	4874107	-	AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AF508782|FGF10|2255|fibroblast growth factor 10##AB002097|FGF10|2255|fibroblast growth factor 10##AF411527|FGF10|2255|fibroblast growth factor 10##BC069561|FGF10|2255|fibroblast growth factor 10##CR541665|FGF10|2255|fibroblast growth factor 10##CR541688|FGF10|2255|fibroblast growth factor 10##GQ351295|FGF10|2255|fibroblast growth factor 10##HQ258011|FGF10|2255|fibroblast growth factor 10##NM_004465|FGF10|2255|fibroblast growth factor 10##U67918|FGF10|2255|fibroblast growth factor 10##BC105023|FGF10|2255|fibroblast growth factor 10##BC105021|FGF10|2255|fibroblast growth factor 10##Z50101|NNT|23530|nicotinamide nucleotide transhydrogenase##AM392664|NNT|23530|nicotinamide nucleotide transhydrogenase##AM393615|NNT|23530|nicotinamide nucleotide transhydrogenase##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AK300860|EMB|133418|embigin##BC059398|EMB|133418|embigin	0.15153	
chr8	76314373	76314495	reg1012952.p1	9.871	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-417525	+	CR749657 NM_015886	-577663	+	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	-1051744	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	5754	+	BX571750 NM_004133 EU832451 HQ692842	137780	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	1279076	+	NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15##AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4	0.92504	CTCF.p2:1:0.925
chrX	14546880	14547001	reg1011306.p2	9.870	+	BC003607 AK000521 BC014324 BC020785 NM_001042479 NM_001042480 NM_017856	-498944	-	TSC_hg19_v1_chrX_-_13956758 AB209525 U45955 NM_001001994	-590112	-	TSC_hg19_v1_chrX_-_13956533 AK294314	-590409	-	AK312591 NM_001118885 NM_001118886 NM_001171942 NM_002063 AK297304	510	+	TSC_hg19_v1_chrX_-_14891182 BC136558 BC136560 BC043596 BC055411 NM_001018113 NM_152633 AK091383 AX746948	344235	-	NM_152581 TSC_hg19_v1_chrX_+_14891582 BC030641 AL832230 AK315781	344616	+	BC003607|GEMIN8|54960|gem (nuclear organelle) associated protein 8##AK000521|GEMIN8|54960|gem (nuclear organelle) associated protein 8##BC014324|GEMIN8|54960|gem (nuclear organelle) associated protein 8##BC020785|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_001042479|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_001042480|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_017856|GEMIN8|54960|gem (nuclear organelle) associated protein 8##AB209525|GPM6B|2824|glycoprotein M6B##U45955|GPM6B|2824|glycoprotein M6B##NM_001001994|GPM6B|2824|glycoprotein M6B##AK294314|GPM6B|2824|glycoprotein M6B##AK312591|GLRA2|2742|glycine receptor, alpha 2##NM_001118885|GLRA2|2742|glycine receptor, alpha 2##NM_001118886|GLRA2|2742|glycine receptor, alpha 2##NM_001171942|GLRA2|2742|glycine receptor, alpha 2##NM_002063|GLRA2|2742|glycine receptor, alpha 2##AK297304|GLRA2|2742|glycine receptor, alpha 2##BC136558|FANCB|2187|Fanconi anemia, complementation group B##BC136560|FANCB|2187|Fanconi anemia, complementation group B##BC043596|FANCB|2187|Fanconi anemia, complementation group B##BC055411|FANCB|2187|Fanconi anemia, complementation group B##NM_001018113|FANCB|2187|Fanconi anemia, complementation group B##NM_152633|FANCB|2187|Fanconi anemia, complementation group B##AK091383|FANCB|2187|Fanconi anemia, complementation group B##NM_152581|MOSPD2|158747|motile sperm domain containing 2##BC030641|MOSPD2|158747|motile sperm domain containing 2##AL832230|MOSPD2|158747|motile sperm domain containing 2##AK315781|MOSPD2|158747|motile sperm domain containing 2	0.997567	CTCF.p2:5:0.998
chr5	131841949	131842072	reg1011569.p2	9.869	+	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	-15529	-	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-95382	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-136502	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	37182	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	50630	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	151880	+	X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13	0.472485	CTCF.p2:-13:0.472
chr3	75411643	75411796	reg1012731.p1	9.868	+	AB384611 BC150608 NM_020872	-841417	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1737681	-	BC051316 BC064501 NM_018029	-2300910	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	72430	-	AK000525 NM_001124759	301764	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	309767	+	BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074	1.631974	CTCF.p2:-22:0.892	CTCF.p2:80:0.740
chr5	113436992	113437113	reg1014891.p1	9.868	+	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	-587656	+	AK128596 NM_001085377	-612526	-	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	-666420	-	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	260997	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	261409	+	BC015371 NM_170775 BC040722	332197	+	AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2##AK128596|MCC|4163|mutated in colorectal cancers##NM_001085377|MCC|4163|mutated in colorectal cancers##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	0.496914	CTCF.p2:7:0.497
chr7	100926384	100926486	reg1010353.p1	9.868	+	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-30869	-	TSC_hg19_v1_chr7_-_100888367 NM_016068	-38065	-	CU678480 BC003540 BC009428 TSC_hg19_v1_chr7_-_100888363 AF151893	-38110	-	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	38603	-	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	79782	+	BC002778 NM_138403	346140	-	AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##NM_016068|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC003540|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC009428|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AF151893|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory	0.495496	CTCF.p2:14:0.485
chr7	47484424	47484552	reg1013754.p1	9.868	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-1523682	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-1551354	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-1556383	+	TSC_hg19_v1_chr7_-_47579207 BC071791	94721	-	TSC_hg19_v1_chr7_-_47621681 CR749644	137175	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	137295	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.0	
chr14	24797262	24797377	reg1012988.p1	9.867	+	NM_181657	-15007	+	TSC_hg19_v1_chr14_+_24780707 D89079 NM_001143919 U41070	-16625	+	TSC_hg19_v1_chr14_-_24780642 AK122828	-16670	-	BX248285 BC027943 AK122714 AK126468 NM_001198568 NM_001198592 NM_139247 TSC_hg19_v1_chr14_-_24804278	6946	-	AF156884 AY453693 AY494982 AY494983 CU692020 TSC_hg19_v1_chr14_-_24809197 BC062584 AK296309 BC041668 AK296140 AK075275 NM_006871	11820	-	AK310445 EU887632 EU887633 EU887634 NM_001136022 NM_001198967	38825	+	NM_181657|LTB4R|1241|leukotriene B4 receptor##D89079|LTB4R|1241|leukotriene B4 receptor##NM_001143919|LTB4R|1241|leukotriene B4 receptor##U41070|LTB4R|1241|leukotriene B4 receptor##AK122828|CIDEB|27141|cell death-inducing DFFA-like effector b##BX248285|ADCY4|196883|adenylate cyclase 4##BC027943|ADCY4|196883|adenylate cyclase 4##AK122714|ADCY4|196883|adenylate cyclase 4##AK126468|ADCY4|196883|adenylate cyclase 4##NM_001198568|ADCY4|196883|adenylate cyclase 4##NM_001198592|ADCY4|196883|adenylate cyclase 4##NM_139247|ADCY4|196883|adenylate cyclase 4##AF156884|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY453693|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494982|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494983|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC062584|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296309|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC041668|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296140|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK075275|RIPK3|11035|receptor-interacting serine-threonine kinase 3##NM_006871|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK310445|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887632|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887633|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887634|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001136022|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198967|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4	0.830069	CTCF.p2:-11:0.830
chr17	4103251	4103369	reg1013320.p1	9.867	+	TSC_hg19_v1_chr17_+_4046995 AK313088 AK172844 BC020263 CU690822 DQ891696 DQ894877	-56301	+	TSC_hg19_v1_chr17_+_4046490 NM_144611 BC051697	-56827	+	TSC_hg19_v1_chr17_-_4046308 AK127482	-57000	-	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	63841	-	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	166401	-	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	166598	-	AK313088|CYB5D2|124936|cytochrome b5 domain containing 2##AK172844|CYB5D2|124936|cytochrome b5 domain containing 2##BC020263|CYB5D2|124936|cytochrome b5 domain containing 2##DQ891696|CYB5D2|124936|cytochrome b5 domain containing 2##DQ894877|CYB5D2|124936|cytochrome b5 domain containing 2##NM_144611|CYB5D2|124936|cytochrome b5 domain containing 2##BC051697|CYB5D2|124936|cytochrome b5 domain containing 2##AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1	0.980922	CTCF.p2:4:0.981
chr1	15631355	15631452	reg1011764.p1	9.866	+	AK057963 NM_052929	-57636	+	TSC_hg19_v1_chr1_+_15480249 AK001061 NM_001136218 NM_018022 BC000593 BC005177 AK098467	-151155	+	AK129922 TSC_hg19_v1_chr1_+_15479310	-152099	+	TSC_hg19_v1_chr1_+_15736390 NM_024329	104997	+	BC068473 TSC_hg19_v1_chr1_+_15736425 BC007233 BC014923 BC023611	105032	+	BC015118 CR749296 NM_007272 AK289447 BC059779 S82198	133544	+	AK057963|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##NM_052929|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##AK001061|TMEM51|55092|transmembrane protein 51##NM_001136218|TMEM51|55092|transmembrane protein 51##NM_018022|TMEM51|55092|transmembrane protein 51##BC000593|TMEM51|55092|transmembrane protein 51##BC005177|TMEM51|55092|transmembrane protein 51##AK098467|TMEM51|55092|transmembrane protein 51##AK129922|TMEM51|55092|transmembrane protein 51##NM_024329|EFHD2|79180|EF-hand domain family, member D2##BC068473|EFHD2|79180|EF-hand domain family, member D2##BC007233|EFHD2|79180|EF-hand domain family, member D2##BC014923|EFHD2|79180|EF-hand domain family, member D2##BC023611|EFHD2|79180|EF-hand domain family, member D2##BC015118|CTRC|11330|chymotrypsin C (caldecrin)##CR749296|CTRC|11330|chymotrypsin C (caldecrin)##NM_007272|CTRC|11330|chymotrypsin C (caldecrin)##AK289447|CTRC|11330|chymotrypsin C (caldecrin)##BC059779|CTRC|11330|chymotrypsin C (caldecrin)##S82198|CTRC|11330|chymotrypsin C (caldecrin)	0.999879	CTCF.p2:8:1.000
chr13	95269753	95269894	reg1013344.p1	9.866	+	TSC_hg19_v1_chr13_+_95254110 NM_180989 BC033906 BC052243 AK126794	-15721	+	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	-21327	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	-21394	-	X65666 X71136 AB464716 NM_007084	94495	-	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	683889	-	NM_001160100 NM_182848 AK055855	816031	+	NM_180989|GPR180|160897|G protein-coupled receptor 180##BC033906|GPR180|160897|G protein-coupled receptor 180##BC052243|GPR180|160897|G protein-coupled receptor 180##AK126794|GPR180|160897|G protein-coupled receptor 180##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase##X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10	0.013695	
chr13	98507900	98508029	reg1012049.p1	9.866	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	-421262	+	TSC_hg19_v1_chr13_+_98086350 AK315139 NM_021033 BC041333	-421527	+	TSC_hg19_v1_chr13_+_97999294 AF339832	-508670	+	NM_002271 BC045640	97973	+	TSC_hg19_v1_chr13_+_98628928 BX648222 AK303494 AK225286 BC001497 BC019309 DQ893033 EU176755 U72761	120868	+	TSC_hg19_v1_chr13_+_98795412 NM_001001715 NM_005766	287457	+	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family##AK315139|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_021033|RAP2A|5911|RAP2A, member of RAS oncogene family##BC041333|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_002271|IPO5|3843|importin 5##BC045640|IPO5|3843|importin 5##BX648222|IPO5|3843|importin 5##AK303494|IPO5|3843|importin 5##AK225286|IPO5|3843|importin 5##BC001497|IPO5|3843|importin 5##BC019309|IPO5|3843|importin 5##DQ893033|IPO5|3843|importin 5##EU176755|IPO5|3843|importin 5##U72761|IPO5|3843|importin 5##NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	0.83588	CTCF.p2:-19:0.836
chr2	159036306	159036417	reg1009471.p1	9.866	+	AK122743 NM_173355	-77980	+	BC033529 NM_001135098	-184671	+	AK297765 AK313630 NM_001111067	-304004	-	CU677295 BC105928 BC107596 BC107597 AK123220 AK058105 AF458588 BC015395 AK309246 TSC_hg19_v1_chr2_-_159313250 AK308783 AK311042 NM_001171637 NM_138803	276748	-	TSC_hg19_v1_chr2_+_159313419 BC034473	277074	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	277222	+	AK122743|UPP2|151531|uridine phosphorylase 2##NM_173355|UPP2|151531|uridine phosphorylase 2##BC033529|UPP2|151531|uridine phosphorylase 2##NM_001135098|UPP2|151531|uridine phosphorylase 2##AK297765|ACVR1|90|activin A receptor, type I##AK313630|ACVR1|90|activin A receptor, type I##NM_001111067|ACVR1|90|activin A receptor, type I##BC105928|CCDC148|130940|coiled-coil domain containing 148##BC107596|CCDC148|130940|coiled-coil domain containing 148##BC107597|CCDC148|130940|coiled-coil domain containing 148##AK123220|CCDC148|130940|coiled-coil domain containing 148##AK058105|CCDC148|130940|coiled-coil domain containing 148##AF458588|CCDC148|130940|coiled-coil domain containing 148##BC015395|CCDC148|130940|coiled-coil domain containing 148##AK309246|CCDC148|130940|coiled-coil domain containing 148##AK308783|CCDC148|130940|coiled-coil domain containing 148##AK311042|CCDC148|130940|coiled-coil domain containing 148##NM_001171637|CCDC148|130940|coiled-coil domain containing 148##NM_138803|CCDC148|130940|coiled-coil domain containing 148##BC034473|PKP4|8502|plakophilin 4##NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4	0.470353	CTCF.p2:-1:0.470
chr2	206790660	206790796	reg1014417.p1	9.866	+	TSC_hg19_v1_chr2_+_206547371 AK290934	-243367	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	-243550	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-1380009	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	160183	-	AK295987 NM_001199984	233189	-	X61100 AK098395 BC018900 BC022368 TSC_hg19_v1_chr2_-_207024145 AK300585 BC030833 AK295705 AK295966 AK298320 BC004133 NM_001199981 NM_001199982 NM_001199983 NM_005006	233444	-	AK290934|NRP2|8828|neuropilin 2##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D##AK295987|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199984|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	0.915565	CTCF.p2:15:0.916
chrX	103100132	103100287	reg1013235.p1	9.866	+	AK313425 TSC_hg19_v1_chrX_-_103087160 AB036693 BC041336 BC070069 BC018033 NM_016370	-13033	-	AK312340 TSC_hg19_v1_chrX_+_103031844 AK128782 AK295374 AK295388 M54927 M27110 BC095452	-68388	+	NM_000533 NM_199478 TSC_hg19_v1_chrX_+_103031767 BC002665	-68444	+	TSC_hg19_v1_chrX_-_103174133 AK026512	73925	-	TSC_hg19_v1_chrX_+_103217225 BC093093 NM_194324 BC028039 BC054476 AK291479 BC029803 BC035660	117007	+	AY283370 BC118604 BC121816 BC038109 NM_001002916	168034	-	AK313425|RAB9B|51209|RAB9B, member RAS oncogene family##AB036693|RAB9B|51209|RAB9B, member RAS oncogene family##BC041336|RAB9B|51209|RAB9B, member RAS oncogene family##BC070069|RAB9B|51209|RAB9B, member RAS oncogene family##NM_016370|RAB9B|51209|RAB9B, member RAS oncogene family##AK312340|PLP1|5354|proteolipid protein 1##AK128782|PLP1|5354|proteolipid protein 1##AK295374|PLP1|5354|proteolipid protein 1##AK295388|PLP1|5354|proteolipid protein 1##M54927|PLP1|5354|proteolipid protein 1##M27110|PLP1|5354|proteolipid protein 1##BC095452|PLP1|5354|proteolipid protein 1##NM_000533|PLP1|5354|proteolipid protein 1##NM_199478|PLP1|5354|proteolipid protein 1##BC002665|PLP1|5354|proteolipid protein 1##AK026512|LOC100128594|100128594|uncharacterized LOC100128594##BC093093|TMSB15B|286527|thymosin beta 15B##NM_194324|TMSB15B|286527|thymosin beta 15B##BC054476|TMSB15B|286527|thymosin beta 15B##AK291479|TMSB15B|286527|thymosin beta 15B##BC029803|TMSB15B|286527|thymosin beta 15B##BC035660|TMSB15B|286527|thymosin beta 15B##AY283370|H2BFWT|158983|H2B histone family, member W, testis-specific##BC118604|H2BFWT|158983|H2B histone family, member W, testis-specific##BC121816|H2BFWT|158983|H2B histone family, member W, testis-specific##BC038109|H2BFWT|158983|H2B histone family, member W, testis-specific##NM_001002916|H2BFWT|158983|H2B histone family, member W, testis-specific	0.965311	CTCF.p2:-11:0.965
chr1	204944893	204945002	reg1012359.p1	9.865	+	TSC_hg19_v1_chr1_+_204938044 BC008124	-6885	+	NM_001160331 BC137013 BC144454 BC144455 AB384522	-31549	+	TSC_hg19_v1_chr1_+_204839989 AK308686	-104964	+	TSC_hg19_v1_chr1_+_205012339 NM_005076	67391	+	X67734 X68274 TSC_hg19_v1_chr1_+_205012450	67491	+	BC061592 AY359081 NM_203376 AK303432	108640	-	BC008124|NFASC|23114|neurofascin##NM_001160331|NFASC|23114|neurofascin##BC137013|NFASC|23114|neurofascin##BC144454|NFASC|23114|neurofascin##BC144455|NFASC|23114|neurofascin##AK308686|NFASC|23114|neurofascin##NM_005076|CNTN2|6900|contactin 2 (axonal)##X67734|CNTN2|6900|contactin 2 (axonal)##X68274|CNTN2|6900|contactin 2 (axonal)##BC061592|TMEM81|388730|transmembrane protein 81##AY359081|TMEM81|388730|transmembrane protein 81##NM_203376|TMEM81|388730|transmembrane protein 81##AK303432|TMEM81|388730|transmembrane protein 81	0.885022	CTCF.p2:1:0.885
chr4	177563797	177563909	reg1012509.p1	9.865	+	TSC_hg19_v1_chr4_-_177241652 AK096223	-322222	-	TSC_hg19_v1_chr4_+_177241122 AK026302 AL136660 AY359044 BC043490 BC053883 BC047290 CU690386 EU831652 EU831735	-322685	+	TSC_hg19_v1_chr4_+_177241098 NM_021928	-322800	+	AK313879 BC035212 U58111 X94216 U43142 BC063685 NM_005429 TSC_hg19_v1_chr4_-_177713956	149957	-	TSC_hg19_v1_chr4_+_178231006 NM_018248	667140	+	TSC_hg19_v1_chr4_+_178231027 AK001720 BC025954 AK307692 AB079071	667207	+	AK026302|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AL136660|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AY359044|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC043490|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC053883|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC047290|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831652|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831735|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##NM_021928|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AK313879|VEGFC|7424|vascular endothelial growth factor C##BC035212|VEGFC|7424|vascular endothelial growth factor C##U58111|VEGFC|7424|vascular endothelial growth factor C##X94216|VEGFC|7424|vascular endothelial growth factor C##U43142|VEGFC|7424|vascular endothelial growth factor C##BC063685|VEGFC|7424|vascular endothelial growth factor C##NM_005429|VEGFC|7424|vascular endothelial growth factor C##NM_018248|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK001720|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##BC025954|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK307692|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AB079071|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)	0.0	
chr8	68733137	68733271	reg1011530.p1	9.865	+	AF221594 AY044833 BC033684 NM_020361	-74606	-	BC030256 TSC_hg19_v1_chr8_+_68256207	-477049	+	NM_006421 TSC_hg19_v1_chr8_-_68256017	-477239	-	TSC_hg19_v1_chr8_+_68864347 BC068571 BC036055 AJ437636	131148	+	TSC_hg19_v1_chr8_+_68864598 AY508996 AY508997 NM_024870 NM_025170	131391	+	TSC_hg19_v1_chr8_+_68864614 AY570973	131429	+	AF221594|CPA6|57094|carboxypeptidase A6##AY044833|CPA6|57094|carboxypeptidase A6##BC033684|CPA6|57094|carboxypeptidase A6##NM_020361|CPA6|57094|carboxypeptidase A6##NM_006421|ARFGEF1|10565|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)##AJ437636|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY508996|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY508997|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##NM_024870|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##NM_025170|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	0.945281	CTCF.p2:-8:0.945
chr17	65374934	65375080	reg1010018.p2	9.864	+	BC007905 NM_012417 NM_181671	-1084	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-1419	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-1598	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	339043	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	446695	+	AK293224 TSC_hg19_v1_chr17_+_65822221	447210	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	1.770327	CTCF.p2:3:0.967	CTCF.p2:46:0.803
chr22	45949754	45949875	reg1014057.p1	9.864	+	TSC_hg19_v1_chr22_+_45898762 NM_001996 NM_006485 NM_006486 NM_006487 AK075566 AK075460 AK300806 AK316291 BC022497 AF217999 AF126110 U01244 X53741 X53742 X53743 AB528743 DQ894047	-51038	+	TSC_hg19_v1_chr22_+_45809599 BC003024 BC009904 AL442116	-140186	+	TSC_hg19_v1_chr22_+_45809579 AK098586 NM_015653 AK225722	-140245	+	NM_001167621 NM_013236 AK294348 TSC_hg19_v1_chr22_+_46067713	117881	+	TSC_hg19_v1_chr22_+_46067733 AF086923 AL050282	117915	+	AK025734 TSC_hg19_v1_chr22_+_46067746 AF119662 BC007508	117942	+	NM_001996|FBLN1|2192|fibulin 1##NM_006485|FBLN1|2192|fibulin 1##NM_006486|FBLN1|2192|fibulin 1##NM_006487|FBLN1|2192|fibulin 1##AK075566|FBLN1|2192|fibulin 1##AK075460|FBLN1|2192|fibulin 1##AK300806|FBLN1|2192|fibulin 1##AK316291|FBLN1|2192|fibulin 1##BC022497|FBLN1|2192|fibulin 1##AF217999|FBLN1|2192|fibulin 1##AF126110|FBLN1|2192|fibulin 1##U01244|FBLN1|2192|fibulin 1##X53741|FBLN1|2192|fibulin 1##X53742|FBLN1|2192|fibulin 1##X53743|FBLN1|2192|fibulin 1##DQ894047|FBLN1|2192|fibulin 1##BC003024|RIBC2|26150|RIB43A domain with coiled-coils 2##BC009904|RIBC2|26150|RIB43A domain with coiled-coils 2##AL442116|RIBC2|26150|RIB43A domain with coiled-coils 2##AK098586|RIBC2|26150|RIB43A domain with coiled-coils 2##NM_015653|RIBC2|26150|RIB43A domain with coiled-coils 2##AK225722|RIBC2|26150|RIB43A domain with coiled-coils 2##NM_001167621|ATXN10|25814|ataxin 10##NM_013236|ATXN10|25814|ataxin 10##AK294348|ATXN10|25814|ataxin 10##AF086923|ATXN10|25814|ataxin 10##AL050282|ATXN10|25814|ataxin 10##AK025734|ATXN10|25814|ataxin 10##AF119662|ATXN10|25814|ataxin 10##BC007508|ATXN10|25814|ataxin 10	0.997597	CTCF.p2:5:0.998
chr6	217158	217302	reg1014001.p1	9.864	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	74855	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	75267	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	174534	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	1.067511	CTCF.p2:18:0.863	CTCF.p2:-49:0.204
chr12	50433126	50433236	reg1012167.p1	9.863	+	BC024144 AB030251 TSC_hg19_v1_chr12_-_50419242 AK000733 AL136794 BC032754 AK315785 NM_001126103 NM_001126104 NM_013277	-13948	-	NM_001652 U48408	-66562	+	NM_001651	-77903	+	NM_001095 NM_020039 U78180 U78181 BC028722 AK290010	18380	+	TSC_hg19_v1_chr12_+_50479018 NM_003076 NM_139071 U66617 BC009368	45806	+	TSC_hg19_v1_chr12_+_50479124 AK292700 AK293932 AK130517 AB527887 CU679327 EU447009 BC000063 AF109733	45932	+	BC024144|RACGAP1|29127|Rac GTPase activating protein 1##AB030251|RACGAP1|29127|Rac GTPase activating protein 1##AK000733|RACGAP1|29127|Rac GTPase activating protein 1##AL136794|RACGAP1|29127|Rac GTPase activating protein 1##BC032754|RACGAP1|29127|Rac GTPase activating protein 1##AK315785|RACGAP1|29127|Rac GTPase activating protein 1##NM_001126103|RACGAP1|29127|Rac GTPase activating protein 1##NM_001126104|RACGAP1|29127|Rac GTPase activating protein 1##NM_013277|RACGAP1|29127|Rac GTPase activating protein 1##NM_001652|AQP6|363|aquaporin 6, kidney specific##U48408|AQP6|363|aquaporin 6, kidney specific##NM_001651|AQP5|362|aquaporin 5##NM_001095|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##NM_020039|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78180|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78181|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##BC028722|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##AK290010|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	0.999742	CTCF.p2:3:1.000
chr11	14926454	14926606	reg1013802.p1	9.862	+	AY323817 NM_024514 BC104907 BC104909	-12757	-	BC052580 BC111070 TSC_hg19_v1_chr11_-_14913218 AK312019 BC084557	-13296	-	TSC_hg19_v1_chr11_+_14665399 BC146828 BC150322 X95520 AB209326	-260746	+	AK054728 TSC_hg19_v1_chr11_+_14926557	19	+	M26095 X03662 M64486 BC093753 BC101599 BC143562 BC069684 BC069704 BC069760 BC069778 NM_001033952 NM_001033953 NM_001741 X00356	67290	-	BC008428 AK291188 BC092468 NM_000728	168596	+	AY323817|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##NM_024514|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104907|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104909|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC052580|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC111070|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC146828|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##BC150322|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##X95520|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##AB209326|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##AK054728|CALCB|797|calcitonin-related polypeptide beta##M26095|CALCA|796|calcitonin-related polypeptide alpha##X03662|CALCA|796|calcitonin-related polypeptide alpha##M64486|CALCA|796|calcitonin-related polypeptide alpha##BC093753|CALCA|796|calcitonin-related polypeptide alpha##BC101599|CALCA|796|calcitonin-related polypeptide alpha##BC143562|CALCA|796|calcitonin-related polypeptide alpha##BC069684|CALCA|796|calcitonin-related polypeptide alpha##BC069704|CALCA|796|calcitonin-related polypeptide alpha##BC069760|CALCA|796|calcitonin-related polypeptide alpha##BC069778|CALCA|796|calcitonin-related polypeptide alpha##NM_001033952|CALCA|796|calcitonin-related polypeptide alpha##NM_001033953|CALCA|796|calcitonin-related polypeptide alpha##NM_001741|CALCA|796|calcitonin-related polypeptide alpha##X00356|CALCA|796|calcitonin-related polypeptide alpha##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta	0.901043	CTCF.p2:12:0.901
chr11	4514608	4514710	reg1009069.p2	9.862	+	BC137056 BC137059 NM_001005171	-4551	+	BC137247 BC137248 NM_001005172	-44135	+	TSC_hg19_v1_chr11_-_4414904 BC010861 M62800 AK225564 NM_003141	-99753	-	AB463978 NM_001004137	51759	+	AF439154 NM_144663 AB528787	84390	-	BC136921 BC151144 NM_001005170	93361	+	BC137056|OR52K1|390036|olfactory receptor, family 52, subfamily K, member 1##BC137059|OR52K1|390036|olfactory receptor, family 52, subfamily K, member 1##NM_001005171|OR52K1|390036|olfactory receptor, family 52, subfamily K, member 1##BC137247|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##BC137248|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##NM_001005172|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##BC010861|TRIM21|6737|tripartite motif containing 21##M62800|TRIM21|6737|tripartite motif containing 21##AK225564|TRIM21|6737|tripartite motif containing 21##NM_003141|TRIM21|6737|tripartite motif containing 21##NM_001004137|OR52M1|119772|olfactory receptor, family 52, subfamily M, member 1##AF439154|C11orf40|143501|chromosome 11 open reading frame 40##NM_144663|C11orf40|143501|chromosome 11 open reading frame 40##BC136921|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##BC151144|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##NM_001005170|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	0.694155	CTCF.p2:8:0.694
chr16	67976081	67976233	reg1013422.p1	9.862	+	TSC_hg19_v1_chr16_-_67970754 AK312208 Y13640 AK225658 AK298012 NM_002801	-5401	-	AB464083 BT019723 BT019724 CR456982 CU690910 BC052369 BC017198 TSC_hg19_v1_chr16_-_67970733	-5465	-	CU687738 BC063475 AK223172 X71877 BC039716 NM_001907	-10392	-	M26268 TSC_hg19_v1_chr16_-_67978024 BT009748 BC014781 NM_000229	1856	-	AK310027 TSC_hg19_v1_chr16_-_67978467	2287	-	AK316415 AK097808 AK302790 NM_001145963	21800	-	AK312208|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##Y13640|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##AK225658|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##AK298012|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##NM_002801|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BT019723|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BT019724|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##CR456982|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BC052369|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BC017198|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BC063475|CTRL|1506|chymotrypsin-like##AK223172|CTRL|1506|chymotrypsin-like##X71877|CTRL|1506|chymotrypsin-like##BC039716|CTRL|1506|chymotrypsin-like##NM_001907|CTRL|1506|chymotrypsin-like##M26268|LCAT|3931|lecithin-cholesterol acyltransferase##BT009748|LCAT|3931|lecithin-cholesterol acyltransferase##BC014781|LCAT|3931|lecithin-cholesterol acyltransferase##NM_000229|LCAT|3931|lecithin-cholesterol acyltransferase##AK310027|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK316415|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK097808|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK302790|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_001145963|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4	0.0	
chr3	170905621	170905747	reg1013053.p1	9.862	+	NM_000340	-160917	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-161151	-	AB528020 J03810 TSC_hg19_v1_chr3_-_170744510 AK313622 BC060041 AK290846 AK292741	-161194	-	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	272387	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	622571	-	NM_001164436 AK026825	655464	+	NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##J03810|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK313622|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##BC060041|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK290846|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK292741|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212	0.0	
chr6	148881023	148881127	reg1010787.p1	9.862	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-216884	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-217085	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	-217312	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	187134	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	758028	+	AK315038 NM_015093 AK307650	758366	+	AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##NM_005715|UST|10090|uronyl-2-sulfotransferase##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2	0.999332	CTCF.p2:2:0.999
chr10	90694692	90694807	reg1006526.p1	9.861	+	TSC_hg19_v1_chr10_+_90640003 AK056086 BC010846 NM_020799	-54771	+	AX721211 NM_144590	-83046	-	EF426484 NM_001128215	-132263	+	J05192 X13839 BC017554 TSC_hg19_v1_chr10_-_90712531 AK300353 BC093052 AK300664 AK313294 NM_001613	17795	-	NM_000043 NM_152871 NM_152872 BC012479 TSC_hg19_v1_chr10_+_90750342	55569	+	TSC_hg19_v1_chr10_+_90750599 AK290978 X63717 M67454 X83490 X83491 X83492 X83493 DQ894675 AY495076 CR450307 EU481974 FJ373045 FJ373046 FM246457 FM246458 FM246459 X89101 Z47993 Z47994 Z47995 Z66556 Z70519 Z70520	55759	+	AK056086|STAMBPL1|57559|STAM binding protein-like 1##BC010846|STAMBPL1|57559|STAM binding protein-like 1##NM_020799|STAMBPL1|57559|STAM binding protein-like 1##NM_144590|ANKRD22|118932|ankyrin repeat domain 22##EF426484|LIPM|340654|lipase, family member M##NM_001128215|LIPM|340654|lipase, family member M##J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta##X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_000043|FAS|355|Fas (TNF receptor superfamily, member 6)##NM_152871|FAS|355|Fas (TNF receptor superfamily, member 6)##NM_152872|FAS|355|Fas (TNF receptor superfamily, member 6)##BC012479|FAS|355|Fas (TNF receptor superfamily, member 6)##AK290978|FAS|355|Fas (TNF receptor superfamily, member 6)##X63717|FAS|355|Fas (TNF receptor superfamily, member 6)##M67454|FAS|355|Fas (TNF receptor superfamily, member 6)##X83490|FAS|355|Fas (TNF receptor superfamily, member 6)##X83491|FAS|355|Fas (TNF receptor superfamily, member 6)##X83492|FAS|355|Fas (TNF receptor superfamily, member 6)##X83493|FAS|355|Fas (TNF receptor superfamily, member 6)##DQ894675|FAS|355|Fas (TNF receptor superfamily, member 6)##AY495076|FAS|355|Fas (TNF receptor superfamily, member 6)##CR450307|FAS|355|Fas (TNF receptor superfamily, member 6)##EU481974|FAS|355|Fas (TNF receptor superfamily, member 6)##FJ373045|FAS|355|Fas (TNF receptor superfamily, member 6)##FJ373046|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246457|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246458|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246459|FAS|355|Fas (TNF receptor superfamily, member 6)##X89101|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47993|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47994|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47995|FAS|355|Fas (TNF receptor superfamily, member 6)##Z66556|FAS|355|Fas (TNF receptor superfamily, member 6)##Z70519|FAS|355|Fas (TNF receptor superfamily, member 6)##Z70520|FAS|355|Fas (TNF receptor superfamily, member 6)	0.98924	CTCF.p2:1:0.989
chr11	119194358	119194506	reg1014269.p1	9.860	+	AB527309 EU832794 GQ129330 TSC_hg19_v1_chr11_-_119187841 BC006329 M28882 M29277 AF089868 BC056418 AK128335 AK291571 AK312430 NM_006500 AB209925	-6591	-	TSC_hg19_v1_chr11_+_119077024 BC132733 BC136463	-117392	+	TSC_hg19_v1_chr11_+_119076992 X57110 NM_005188	-117449	+	TSC_hg19_v1_chr11_+_119205234 BX648447 AK122642 BX647424 NM_032015	10799	+	AL110261 AB590791 TSC_hg19_v1_chr11_-_119211170	16670	-	TSC_hg19_v1_chr11_-_119211575 AF329841 AY358383 BC029485	17150	-	EU832794|MCAM|4162|melanoma cell adhesion molecule##GQ129330|MCAM|4162|melanoma cell adhesion molecule##M28882|MCAM|4162|melanoma cell adhesion molecule##M29277|MCAM|4162|melanoma cell adhesion molecule##AF089868|MCAM|4162|melanoma cell adhesion molecule##BC056418|MCAM|4162|melanoma cell adhesion molecule##AK128335|MCAM|4162|melanoma cell adhesion molecule##AK291571|MCAM|4162|melanoma cell adhesion molecule##AK312430|MCAM|4162|melanoma cell adhesion molecule##NM_006500|MCAM|4162|melanoma cell adhesion molecule##AB209925|MCAM|4162|melanoma cell adhesion molecule##BC132733|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##BC136463|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##X57110|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##NM_005188|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##BX648447|RNF26|79102|ring finger protein 26##AK122642|RNF26|79102|ring finger protein 26##BX647424|RNF26|79102|ring finger protein 26##NM_032015|RNF26|79102|ring finger protein 26##AL110261|MFRP|83552|membrane frizzled-related protein##AF329841|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##AY358383|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##BC029485|MFRP|83552|membrane frizzled-related protein	0.917506	CTCF.p2:14:0.918
chr2	219051137	219051272	reg1011741.p1	9.860	+	M68932 BC072397 BC028221 AK309632 AK312668 U11871 L19591 NM_000634 AK298647	-19519	-	NM_001557 U11874 L19593 U11875 BC037961 AK290906 AK312664	-60415	+	U11872 NM_001168298	-61200	+	TSC_hg19_v1_chr2_+_219081867 NM_152862	30665	+	TSC_hg19_v1_chr2_+_219081905 U50523	30698	+	TSC_hg19_v1_chr2_+_219081914 AK290268 BC000590	30729	+	BC072397|CXCR1|3577|chemokine (C-X-C motif) receptor 1##BC028221|CXCR1|3577|chemokine (C-X-C motif) receptor 1##AK309632|CXCR1|3577|chemokine (C-X-C motif) receptor 1##AK312668|CXCR1|3577|chemokine (C-X-C motif) receptor 1##U11871|CXCR1|3577|chemokine (C-X-C motif) receptor 1##L19591|CXCR1|3577|chemokine (C-X-C motif) receptor 1##NM_000634|CXCR1|3577|chemokine (C-X-C motif) receptor 1##AK298647|CXCR1|3577|chemokine (C-X-C motif) receptor 1##NM_001557|CXCR2|3579|chemokine (C-X-C motif) receptor 2##U11874|CXCR2|3579|chemokine (C-X-C motif) receptor 2##L19593|CXCR2|3579|chemokine (C-X-C motif) receptor 2##U11875|CXCR2|3579|chemokine (C-X-C motif) receptor 2##BC037961|CXCR2|3579|chemokine (C-X-C motif) receptor 2##AK290906|CXCR2|3579|chemokine (C-X-C motif) receptor 2##AK312664|CXCR2|3579|chemokine (C-X-C motif) receptor 2##U11872|CXCR2|3579|chemokine (C-X-C motif) receptor 2##NM_001168298|CXCR2|3579|chemokine (C-X-C motif) receptor 2##NM_152862|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##U50523|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##AK290268|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##BC000590|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	0.969628	CTCF.p2:-7:0.970
chr12	99047818	99047932	reg1011333.p2	9.859	+	AK307509 TSC_hg19_v1_chr12_+_99039067 AF013263 NM_001160 NM_013229 NM_181861 NM_181868 NM_181869	-8878	+	TSC_hg19_v1_chr12_-_99038755 AK123069	-9070	-	TSC_hg19_v1_chr12_-_99038567 CU691338 BC058933 AK055613 BC107572 BC051372 AJ539425 AJ539426 AJ539427 BC029415 NM_153687 NM_201612 NM_201613	-9367	-	AY356353 AK315954 AM980945 AK294994 TSC_hg19_v1_chr12_-_99288638 AK295988 NM_001204065 NM_001204079 NM_001204080 NM_001204081	240712	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	500682	-	AK294191 NM_001204067	500992	-	AK307509|APAF1|317|apoptotic peptidase activating factor 1##AF013263|APAF1|317|apoptotic peptidase activating factor 1##NM_001160|APAF1|317|apoptotic peptidase activating factor 1##NM_013229|APAF1|317|apoptotic peptidase activating factor 1##NM_181861|APAF1|317|apoptotic peptidase activating factor 1##NM_181868|APAF1|317|apoptotic peptidase activating factor 1##NM_181869|APAF1|317|apoptotic peptidase activating factor 1##AK123069|IKBIP|121457|IKBKB interacting protein##BC058933|IKBIP|121457|IKBKB interacting protein##AK055613|IKBIP|121457|IKBKB interacting protein##BC107572|IKBIP|121457|IKBKB interacting protein##BC051372|IKBIP|121457|IKBKB interacting protein##AJ539425|IKBIP|121457|IKBKB interacting protein##AJ539426|IKBIP|121457|IKBKB interacting protein##AJ539427|IKBIP|121457|IKBKB interacting protein##BC029415|IKBIP|121457|IKBKB interacting protein##NM_153687|IKBIP|121457|IKBKB interacting protein##NM_201612|IKBIP|121457|IKBKB interacting protein##NM_201613|IKBIP|121457|IKBKB interacting protein##AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	0.250421	CTCF.p2:2:0.250
chr19	54672372	54672449	reg1004913.p1	9.859	+	DQ892220 DQ895417 DQ895418 TSC_hg19_v1_chr19_-_54663482 BC014986 NM_024316	-8952	-	TSC_hg19_v1_chr19_+_54641477 BC016474 AK300434 AK160386	-30893	+	TSC_hg19_v1_chr19_+_54641468 NM_014516	-30963	+	DQ892181 DQ895377 AY263166 BC025323 TSC_hg19_v1_chr19_-_54676855 AK314973 AY236492 NM_001145303 NM_144686	4468	-	S82470 TSC_hg19_v1_chr19_-_54692218 AK293199 BC002512 EU016381	19836	-	TSC_hg19_v1_chr19_-_54693214 BC003164 BC015857	20820	-	DQ892220|LENG1|79165|leukocyte receptor cluster (LRC) member 1##DQ895417|LENG1|79165|leukocyte receptor cluster (LRC) member 1##DQ895418|LENG1|79165|leukocyte receptor cluster (LRC) member 1##BC014986|LENG1|79165|leukocyte receptor cluster (LRC) member 1##NM_024316|LENG1|79165|leukocyte receptor cluster (LRC) member 1##BC016474|CNOT3|4849|CCR4-NOT transcription complex, subunit 3##AK300434|CNOT3|4849|CCR4-NOT transcription complex, subunit 3##AK160386|CNOT3|4849|CCR4-NOT transcription complex, subunit 3##NM_014516|CNOT3|4849|CCR4-NOT transcription complex, subunit 3##DQ892181|TMC4|147798|transmembrane channel-like 4##DQ895377|TMC4|147798|transmembrane channel-like 4##AY263166|TMC4|147798|transmembrane channel-like 4##BC025323|TMC4|147798|transmembrane channel-like 4##AK314973|TMC4|147798|transmembrane channel-like 4##AY236492|TMC4|147798|transmembrane channel-like 4##NM_001145303|TMC4|147798|transmembrane channel-like 4##NM_144686|TMC4|147798|transmembrane channel-like 4##S82470|MBOAT7|79143|membrane bound O-acyltransferase domain containing 7##AK293199|MBOAT7|79143|membrane bound O-acyltransferase domain containing 7##BC002512|MBOAT7|79143|membrane bound O-acyltransferase domain containing 7##EU016381|MBOAT7|79143|membrane bound O-acyltransferase domain containing 7##BC003164|MBOAT7|79143|membrane bound O-acyltransferase domain containing 7##BC015857|MBOAT7|79143|membrane bound O-acyltransferase domain containing 7	0.999377	CTCF.p2:1:0.999
chr3	38388131	38388252	reg1011257.p1	9.859	+	AB011082 BC126482 BC130543 BC144079 NM_004803 BC075070 BC075071 HQ258465	-40720	+	NM_004256 AK315301 BC035973 AB010438 CU690244 AK298375	-80845	+	TSC_hg19_v1_chr3_+_38263077 AF087893	-125108	+	TSC_hg19_v1_chr3_+_38388285 AB015046 BC039712 NM_005108	62	+	TSC_hg19_v1_chr3_+_38388288 BC052984	99	+	TSC_hg19_v1_chr3_+_38388298 AK025728 AK314386 BC030231 BC137076 BC137080 AK293325	150	+	AB011082|SLC22A14|9389|solute carrier family 22, member 14##BC126482|SLC22A14|9389|solute carrier family 22, member 14##BC130543|SLC22A14|9389|solute carrier family 22, member 14##BC144079|SLC22A14|9389|solute carrier family 22, member 14##NM_004803|SLC22A14|9389|solute carrier family 22, member 14##BC075070|SLC22A14|9389|solute carrier family 22, member 14##BC075071|SLC22A14|9389|solute carrier family 22, member 14##HQ258465|SLC22A14|9389|solute carrier family 22, member 14##NM_004256|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AK315301|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##BC035973|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AB010438|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AK298375|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AF087893|OXSR1|9943|oxidative-stress responsive 1##AB015046|XYLB|9942|xylulokinase homolog (H. influenzae)##BC039712|XYLB|9942|xylulokinase homolog (H. influenzae)##NM_005108|XYLB|9942|xylulokinase homolog (H. influenzae)##BC052984|XYLB|9942|xylulokinase homolog (H. influenzae)##AK025728|XYLB|9942|xylulokinase homolog (H. influenzae)##AK314386|XYLB|9942|xylulokinase homolog (H. influenzae)##BC030231|XYLB|9942|xylulokinase homolog (H. influenzae)##BC137076|XYLB|9942|xylulokinase homolog (H. influenzae)##BC137080|XYLB|9942|xylulokinase homolog (H. influenzae)##AK293325|XYLB|9942|xylulokinase homolog (H. influenzae)	0.0	
chr9	137750401	137750553	reg1011723.p2	9.859	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	-216667	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	-216830	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-532077	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	22183	+	D83920 DQ891426 DQ894436 CR749452 BC020635 AK314867 NM_002003	59280	-	NM_014279 NM_006334 TSC_hg19_v1_chr9_+_137967133	216638	+	D90279|COL5A1|1289|collagen, type V, alpha 1##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D83920|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ891426|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ894436|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##CR749452|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##BC020635|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##AK314867|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_002003|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_014279|OLFM1|10439|olfactomedin 1##NM_006334|OLFM1|10439|olfactomedin 1	0.479747	CTCF.p2:-2:0.462
chr10	45745647	45745819	reg1011983.p1	9.858	+	TSC_hg19_v1_chr10_-_45496265 AK311351 HQ258049 BC062568 BC130369 BC130395 AK055129 NM_001039380	-249369	-	NM_006963 AK291508 AK312278 BC053687 BC010642	-249406	+	BC011402 AB025244 TSC_hg19_v1_chr10_-_45474258 AK002191 AK098476 AL136653 AB022718 AK300839 AK312496 NM_007021	-271464	-	AK131555 NM_001004297	65322	-	TSC_hg19_v1_chr10_+_45869638 AB208946 NM_000698 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223	123904	+	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	123964	+	AK311351|C10orf25|220979|chromosome 10 open reading frame 25##HQ258049|C10orf25|220979|chromosome 10 open reading frame 25##BC062568|C10orf25|220979|chromosome 10 open reading frame 25##BC130369|C10orf25|220979|chromosome 10 open reading frame 25##BC130395|C10orf25|220979|chromosome 10 open reading frame 25##AK055129|C10orf25|220979|chromosome 10 open reading frame 25##NM_001039380|C10orf25|220979|chromosome 10 open reading frame 25##NM_006963|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK291508|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK312278|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC053687|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC010642|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC011402|C10orf10|11067|chromosome 10 open reading frame 10##AB025244|C10orf10|11067|chromosome 10 open reading frame 10##AK002191|C10orf10|11067|chromosome 10 open reading frame 10##AK098476|C10orf10|11067|chromosome 10 open reading frame 10##AL136653|C10orf10|11067|chromosome 10 open reading frame 10##AB022718|C10orf10|11067|chromosome 10 open reading frame 10##AK300839|C10orf10|11067|chromosome 10 open reading frame 10##AK312496|C10orf10|11067|chromosome 10 open reading frame 10##NM_007021|C10orf10|11067|chromosome 10 open reading frame 10##AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##AB208946|ALOX5|240|arachidonate 5-lipoxygenase##NM_000698|ALOX5|240|arachidonate 5-lipoxygenase##AK225603|ALOX5|240|arachidonate 5-lipoxygenase##BC130332|ALOX5|240|arachidonate 5-lipoxygenase##BC132677|ALOX5|240|arachidonate 5-lipoxygenase##BC143985|ALOX5|240|arachidonate 5-lipoxygenase##BC143986|ALOX5|240|arachidonate 5-lipoxygenase##AK315223|ALOX5|240|arachidonate 5-lipoxygenase##BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase	0.997236	CTCF.p2:-37:0.997
chr1	208195278	208195424	reg1011748.p2	9.858	+	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-110794	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-110968	-	BX640941 TSC_hg19_v1_chr1_-_208059392	-136028	-	TSC_hg19_v1_chr1_-_208417635 NM_025179	222298	-	AK091113 AX746785 NM_001104548	1406814	+	NM_020439 AK095713 AK289675 AF428261 BC032787	1561709	+	BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_025179|PLXNA2|5362|plexin A2##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	0.019306	
chr19	10810569	10810669	reg1011956.p2	9.858	+	TSC_hg19_v1_chr19_+_10791025 AJ271747	-19571	+	AB528039 AF167569 AF167570 CU687952 HQ322263 HQ322264 HQ322265 TSC_hg19_v1_chr19_+_10781789	-28893	+	TSC_hg19_v1_chr19_+_10765110 AF141870	-45451	+	NM_031209 TSC_hg19_v1_chr19_+_10812129 AK314308 AK057877 AK225173 AK294166 AF302783 AF370379 BC015350 AF302784	1539	+	TSC_hg19_v1_chr19_+_10828738 NM_001005360 NM_001005361 NM_001005362 NM_001190716 NM_004945	18113	+	TSC_hg19_v1_chr19_+_10828754 AK312260	18135	+	AF167569|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##AF167570|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##HQ322263|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##HQ322264|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##HQ322265|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##AF141870|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##NM_031209|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AK314308|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AK057877|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AK225173|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AK294166|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AF302783|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AF370379|QTRT1|81890|queuine tRNA-ribosyltransferase 1##BC015350|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AF302784|QTRT1|81890|queuine tRNA-ribosyltransferase 1##NM_001005360|DNM2|1785|dynamin 2##NM_001005361|DNM2|1785|dynamin 2##NM_001005362|DNM2|1785|dynamin 2##NM_001190716|DNM2|1785|dynamin 2##NM_004945|DNM2|1785|dynamin 2##AK312260|DNM2|1785|dynamin 2	0.951262	CTCF.p2:3:0.951
chr20	62013297	62013434	reg1014530.p1	9.858	+	X89741 Y08421 AB590558 AK314907 TSC_hg19_v1_chr20_-_61992648 BC096290 BC096291 BC096292 BC096293 L35901 NM_000744 U62433	-20734	-	BC043183 NM_020882 BC041767	-88809	+	AK123367 TSC_hg19_v1_chr20_+_61915676	-97690	+	BT007043 AB527167 Y15065 BC000699 AF110020 TSC_hg19_v1_chr20_-_62104002 AK293727 AF033348 AF074247 D82346 NM_004518 NM_172106 NM_172107 NM_172108 NM_172109	90564	-	TSC_hg19_v1_chr20_-_62130437 X70940 AK307536 NM_001958 BC110409	117148	-	TSC_hg19_v1_chr20_+_62152117 BC002531 NM_024299 AK024699 AK311318	138768	+	X89741|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##Y08421|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##AK314907|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096290|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096291|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096292|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096293|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##L35901|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##NM_000744|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##U62433|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC043183|COL20A1|57642|collagen, type XX, alpha 1##NM_020882|COL20A1|57642|collagen, type XX, alpha 1##BC041767|COL20A1|57642|collagen, type XX, alpha 1##AK123367|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##BT007043|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##Y15065|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##BC000699|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF110020|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AK293727|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF033348|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF074247|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##D82346|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_004518|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172106|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172107|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172108|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172109|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##X70940|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##AK307536|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##NM_001958|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC110409|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	0.975198	CTCF.p2:-3:0.975
chr3	138418134	138418262	reg1012259.p1	9.858	+	AK001444 NM_018147	-90280	+	NM_001033030 NM_001033031 NM_001033032 TSC_hg19_v1_chr3_+_138327638 BC012478	-90582	+	AK125477 TSC_hg19_v1_chr3_+_138327450	-90750	+	AB384841 BC114432 NM_006219 S67334	59986	-	BC062549 NM_023067	247783	-	AK125319 NM_001040061	247877	+	AK001444|FAIM|55179|Fas apoptotic inhibitory molecule##NM_018147|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033030|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033031|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033032|FAIM|55179|Fas apoptotic inhibitory molecule##BC012478|FAIM|55179|Fas apoptotic inhibitory molecule##AK125477|FAIM|55179|Fas apoptotic inhibitory molecule##BC114432|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##NM_006219|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##S67334|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##BC062549|FOXL2|668|forkhead box L2##NM_023067|FOXL2|668|forkhead box L2##AK125319|C3orf72|401089|chromosome 3 open reading frame 72##NM_001040061|C3orf72|401089|chromosome 3 open reading frame 72	0.610074	CTCF.p2:-27:0.610
chr11	67118776	67118902	reg1013549.p1	9.857	+	AK096155 TSC_hg19_v1_chr11_+_67085309	-33525	+	TSC_hg19_v1_chr11_+_67071027 AK074432 AK001790 AK094226 BC007709 AB527672 AB072360 AB099291	-47798	+	NM_017857 TSC_hg19_v1_chr11_+_67070955 AK000522	-47898	+	AF179890 BC001334 TSC_hg19_v1_chr11_-_67121006 BC070250 AB209274 NM_021173	2165	-	DQ891525 DQ894715 AB528390 AY049779 BC066229 BC066230 BC066231 AF172854 BC012939 AF176911 NM_013246	22267	-	AK298052 NM_001166212	22808	-	AK096155|LOC100130987|100130987|uncharacterized LOC100130987##AK074432|SSH3|54961|slingshot homolog 3 (Drosophila)##AK001790|SSH3|54961|slingshot homolog 3 (Drosophila)##AK094226|SSH3|54961|slingshot homolog 3 (Drosophila)##BC007709|SSH3|54961|slingshot homolog 3 (Drosophila)##AB072360|SSH3|54961|slingshot homolog 3 (Drosophila)##AB099291|SSH3|54961|slingshot homolog 3 (Drosophila)##NM_017857|SSH3|54961|slingshot homolog 3 (Drosophila)##AK000522|SSH3|54961|slingshot homolog 3 (Drosophila)##AF179890|POLD4|57804|polymerase (DNA-directed), delta 4##BC001334|POLD4|57804|polymerase (DNA-directed), delta 4##BC070250|POLD4|57804|polymerase (DNA-directed), delta 4##AB209274|POLD4|57804|polymerase (DNA-directed), delta 4##NM_021173|POLD4|57804|polymerase (DNA-directed), delta 4##DQ891525|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ894715|CLCF1|23529|cardiotrophin-like cytokine factor 1##AY049779|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066229|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066230|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066231|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF172854|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC012939|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF176911|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_013246|CLCF1|23529|cardiotrophin-like cytokine factor 1##AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1	0.999868	CTCF.p2:-2:1.000
chr1	60747155	60747272	reg1012358.p1	9.857	+	BC027878 AK124828 NM_152377	-207780	-	BC032594 TSC_hg19_v1_chr1_-_60392478	-354744	-	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	-354828	-	AK092769 TSC_hg19_v1_chr1_+_61542908	795643	+	TSC_hg19_v1_chr1_+_61542928 AK299289 NM_001145511	795723	+	TSC_hg19_v1_chr1_+_61547427 AK299579 NM_001145512	800247	+	BC027878|C1orf87|127795|chromosome 1 open reading frame 87##AK124828|C1orf87|127795|chromosome 1 open reading frame 87##NM_152377|C1orf87|127795|chromosome 1 open reading frame 87##BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK299289|NFIA|4774|nuclear factor I/A##NM_001145511|NFIA|4774|nuclear factor I/A##AK299579|NFIA|4774|nuclear factor I/A##NM_001145512|NFIA|4774|nuclear factor I/A	0.035409	
chr6	80382451	80382578	reg1011816.p1	9.857	+	TSC_hg19_v1_chr6_+_80341019 AF340151 NM_031469 BC109043 BC109044 AK311757 BC040489 AK074506 BC052987 BC060799 BC070059 AJ297972	-41440	+	TSC_hg19_v1_chr6_-_80247114 AK299314 BX648161 BC050327 NM_001122769 NM_181714	-135385	-	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	-438089	-	NM_001243308	197622	-	TSC_hg19_v1_chr6_-_80656870 CU691582 DQ891229 AF277094 BC038506 AY037298 AK310625 AK312511 AK055277 DQ426871 NM_022726	274578	-	NM_001166691 NM_003318 TSC_hg19_v1_chr6_+_80714370 AX775733 BC032858 BC000633 AK292460	331838	+	AF340151|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_031469|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109043|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109044|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK311757|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC040489|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK074506|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC052987|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC060799|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC070059|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AJ297972|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK299314|LCA5|167691|Leber congenital amaurosis 5##BX648161|LCA5|167691|Leber congenital amaurosis 5##BC050327|LCA5|167691|Leber congenital amaurosis 5##NM_001122769|LCA5|167691|Leber congenital amaurosis 5##NM_181714|LCA5|167691|Leber congenital amaurosis 5##AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7##DQ891229|ELOVL4|6785|ELOVL fatty acid elongase 4##AF277094|ELOVL4|6785|ELOVL fatty acid elongase 4##BC038506|ELOVL4|6785|ELOVL fatty acid elongase 4##AY037298|ELOVL4|6785|ELOVL fatty acid elongase 4##AK310625|ELOVL4|6785|ELOVL fatty acid elongase 4##AK312511|ELOVL4|6785|ELOVL fatty acid elongase 4##AK055277|ELOVL4|6785|ELOVL fatty acid elongase 4##DQ426871|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_022726|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_001166691|TTK|7272|TTK protein kinase##NM_003318|TTK|7272|TTK protein kinase##AX775733|TTK|7272|TTK protein kinase##BC032858|TTK|7272|TTK protein kinase##BC000633|TTK|7272|TTK protein kinase##AK292460|TTK|7272|TTK protein kinase	0.030532	
chr1	206635322	206635436	reg1011095.p1	9.856	+	NM_001910 NM_148964 AJ250716 AJ250717 BC042537 TSC_hg19_v1_chr1_+_206317529 J05036 AK292057 CU692090 AK298069	-317848	+	AK122631 NM_001007544	-346733	-	NM_000707 AF030512 AF101726 L37112 AB528977 EU432111	-411018	+	NM_001193321 NM_001193322 NM_014002	8206	+	TSC_hg19_v1_chr1_+_206643818 AK093798 AK310737 AY660028	8427	+	TSC_hg19_v1_chr1_+_206643833 BC105923 BC105924 BC107591 BC107812 D63485	8466	+	NM_001910|CTSE|1510|cathepsin E##NM_148964|CTSE|1510|cathepsin E##AJ250716|CTSE|1510|cathepsin E##AJ250717|CTSE|1510|cathepsin E##BC042537|CTSE|1510|cathepsin E##J05036|CTSE|1510|cathepsin E##AK292057|CTSE|1510|cathepsin E##AK298069|CTSE|1510|cathepsin E##AK122631|C1orf186|440712|chromosome 1 open reading frame 186##NM_001007544|C1orf186|440712|chromosome 1 open reading frame 186##NM_000707|AVPR1B|553|arginine vasopressin receptor 1B##AF030512|AVPR1B|553|arginine vasopressin receptor 1B##AF101726|AVPR1B|553|arginine vasopressin receptor 1B##L37112|AVPR1B|553|arginine vasopressin receptor 1B##EU432111|AVPR1B|553|arginine vasopressin receptor 1B##NM_001193321|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_001193322|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##NM_014002|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AK093798|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AK310737|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##AY660028|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC105923|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC105924|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC107591|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##BC107812|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon##D63485|IKBKE|9641|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon	0.728883	CTCF.p2:-15:0.706
chr1	43243662	43243786	reg1011979.p1	9.856	+	TSC_hg19_v1_chr1_+_43232966 AK299874	-10754	+	TSC_hg19_v1_chr1_+_43232958 BC001508 BC001711	-10780	+	TSC_hg19_v1_chr1_+_43232919 NM_024097	-10809	+	NM_001242750	9936	+	NM_001017922 TSC_hg19_v1_chr1_+_43282791 AK314436 AK125447	39060	+	TSC_hg19_v1_chr1_+_43282801 AK056138 AK295704	39079	+	BC001508|C1orf50|79078|chromosome 1 open reading frame 50##BC001711|C1orf50|79078|chromosome 1 open reading frame 50##NM_024097|C1orf50|79078|chromosome 1 open reading frame 50##NM_001242750|LOC100129924|100129924|uncharacterized LOC100129924##NM_001017922|ERMAP|114625|erythroblast membrane-associated protein (Scianna blood group)##AK314436|ERMAP|114625|erythroblast membrane-associated protein (Scianna blood group)##AK125447|ERMAP|114625|erythroblast membrane-associated protein (Scianna blood group)##AK056138|ERMAP|114625|erythroblast membrane-associated protein (Scianna blood group)##AK295704|ERMAP|114625|erythroblast membrane-associated protein (Scianna blood group)	0.05391	
chr14	50999332	50999477	reg1011787.p1	9.856	+	TSC_hg19_v1_chr14_-_50999306 BC036013 NM_006575 NM_198794 U77129	-94	-	BC104977 NM_004196	-136788	-	TSC_hg19_v1_chr14_+_50779043 BC011549 NM_001003803 NM_001003805 NM_015684 AF052186 U79253	-220363	+	NM_001127713	395	+	NM_015915 NM_181598 AY032844 TSC_hg19_v1_chr14_+_51026833 AK223436 AK290185 BC010708	27386	+	AK312518 TSC_hg19_v1_chr14_+_51026862 AB385220 CU679803	27513	+	BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##BC104977|CDKL1|8814|cyclin-dependent kinase-like 1 (CDC2-related kinase)##NM_004196|CDKL1|8814|cyclin-dependent kinase-like 1 (CDC2-related kinase)##BC011549|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_001003803|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_001003805|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_015684|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##AF052186|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##U79253|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_001127713|ATL1|51062|atlastin GTPase 1##NM_015915|ATL1|51062|atlastin GTPase 1##NM_181598|ATL1|51062|atlastin GTPase 1##AY032844|ATL1|51062|atlastin GTPase 1##AK223436|ATL1|51062|atlastin GTPase 1##AK290185|ATL1|51062|atlastin GTPase 1##BC010708|ATL1|51062|atlastin GTPase 1##AK312518|ATL1|51062|atlastin GTPase 1	0.027657	
chr7	134117558	134117690	reg1011598.p2	9.856	+	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	-115837	-	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	-116001	-	BC104897 BC104899 AK057348 NM_144648	-305547	+	TSC_hg19_v1_chr7_-_134143853 AB209796 BT019859 CR450351 CR542203 CU675153 J04795 DQ890758 DQ892546 DQ893921 DQ895757 M34720 AF328729 J05474 J05017 BC010391 BC005387 X15414	26209	-	TSC_hg19_v1_chr7_-_134143878 AK313439 BC000260 NM_001628 AK311339	26340	-	AF524864 NM_020299 BC008837	94746	+	AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AB209796|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BT019859|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR450351|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR542203|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J04795|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ890758|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ892546|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ893921|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ895757|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##M34720|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF328729|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05474|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05017|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC010391|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC005387|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##X15414|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK313439|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC000260|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001628|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK311339|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)	0.996503	CTCF.p2:-12:0.997
chr9	88401127	88401268	reg1012682.p1	9.856	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	-44326	-	U12140 TSC_hg19_v1_chr9_+_87285349	-1115865	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-1116445	+	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	154877	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	154981	+	TSC_hg19_v1_chr9_-_88714445 AY358593 BC001740 AK075542 AF236056	313228	-	AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AY358593|GOLM1|51280|golgi membrane protein 1##BC001740|GOLM1|51280|golgi membrane protein 1##AK075542|GOLM1|51280|golgi membrane protein 1##AF236056|GOLM1|51280|golgi membrane protein 1	0.766601	CTCF.p2:29:0.767
chr16	15798486	15798604	reg1011605.p2	9.855	+	NM_017668 BC001421 TSC_hg19_v1_chr16_+_15744101 AK000108 AK025815	-54438	+	BC033900 NM_001143979	-61422	+	BC137165 BC137170 BC144514 BC144515 TSC_hg19_v1_chr16_-_15737004 AK302667 AK095840 BC064914 NM_001184998 NM_001184999 NM_014647	-61552	-	BX641087 TSC_hg19_v1_chr16_-_15833973	35410	-	TSC_hg19_v1_chr16_-_15835382 D10667	36902	-	BC101677 BC104906 BC143364 AB020673 AY520816 AY520817 TSC_hg19_v1_chr16_-_15950886 AK308389 BC031040 EU489063 NM_001040113 NM_001040114 NM_002474 NM_022844	152324	-	NM_017668|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC001421|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK000108|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK025815|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC033900|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##NM_001143979|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC137165|KIAA0430|9665|KIAA0430##BC137170|KIAA0430|9665|KIAA0430##BC144514|KIAA0430|9665|KIAA0430##BC144515|KIAA0430|9665|KIAA0430##AK302667|KIAA0430|9665|KIAA0430##AK095840|KIAA0430|9665|KIAA0430##BC064914|KIAA0430|9665|KIAA0430##NM_001184998|KIAA0430|9665|KIAA0430##NM_001184999|KIAA0430|9665|KIAA0430##NM_014647|KIAA0430|9665|KIAA0430##BX641087|MYH11|4629|myosin, heavy chain 11, smooth muscle##D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC101677|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC104906|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC143364|MYH11|4629|myosin, heavy chain 11, smooth muscle##AB020673|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520816|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520817|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK308389|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC031040|MYH11|4629|myosin, heavy chain 11, smooth muscle##EU489063|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040113|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040114|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_002474|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_022844|MYH11|4629|myosin, heavy chain 11, smooth muscle	0.958746	CTCF.p2:9:0.959
chr20	35383106	35383246	reg1013553.p1	9.855	+	TSC_hg19_v1_chr20_-_35374542 NM_022477 NM_032013	-8624	-	TSC_hg19_v1_chr20_-_35374488 AK027665 AK295466 AB044943 AF251054 AK023618 AK295420	-8697	-	BC042041 AK291513 NM_032214 NM_175077	-108589	-	TSC_hg19_v1_chr20_-_35402167 BC035821 AK093031 AX747868 AK290738 NM_001145316 NM_024918 AK301671 AK301840 BC058899 AK023408 BC026011 NM_001145315 NM_001145317 NM_001145318	19009	-	AK057056 TSC_hg19_v1_chr20_-_35407842	24600	-	TSC_hg19_v1_chr20_-_35444558 AK131491	61444	-	NM_022477|NDRG3|57446|NDRG family member 3##NM_032013|NDRG3|57446|NDRG family member 3##AK027665|NDRG3|57446|NDRG family member 3##AK295466|NDRG3|57446|NDRG family member 3##AB044943|NDRG3|57446|NDRG family member 3##AK023618|NDRG3|57446|NDRG family member 3##AK295420|NDRG3|57446|NDRG family member 3##BC042041|SLA2|84174|Src-like-adaptor 2##AK291513|SLA2|84174|Src-like-adaptor 2##NM_032214|SLA2|84174|Src-like-adaptor 2##NM_175077|SLA2|84174|Src-like-adaptor 2##BC035821|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK093031|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK290738|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145316|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_024918|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301671|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301840|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC058899|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK023408|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC026011|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145315|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145317|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145318|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK057056|KIAA0889|140710|KIAA0889##AK131491|KIAA0889|140710|KIAA0889	0.885979	CTCF.p2:6:0.886
chr21	43957604	43957729	reg1012219.p1	9.855	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	-23663	+	AJ269529 NM_018964	-37925	+	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	-41286	-	TSC_hg19_v1_chr21_+_44073730 NM_001001567 NM_001001568 NM_001001569 NM_001001570 NM_001001571 NM_001001572 NM_001001573 NM_001001574 NM_001001575 NM_001001576 NM_001001577 NM_001001578 NM_001001579 NM_001001580 NM_001001581 NM_001001582 NM_001001583 NM_001001584 NM_001001585 NM_002606 AF048837 AY701187 BC009047 AK314679 AY196299 AY196300 AY196301 AY196302 AY196303 AY196304 AY196305 AY196306 AY196307 AY196308 AY196309 AY196310 AY196311 AY196312 AY196313 AY196314 AK001307 AK294112 AF067223 AF067224 AF067225 AF067226 AB527758 AY242121 BT007016 GQ129331 GQ129332	116121	+	AB590172 CU675357 DQ892967 DQ896215 TSC_hg19_v1_chr21_-_44299643 AK292923 AK315008 AJ243912 AJ243913 BC006341	341958	-	TSC_hg19_v1_chr21_-_44299690 BC001074 NM_018669 NM_033661 AK298015	342018	-	BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_001001567|PDE9A|5152|phosphodiesterase 9A##NM_001001568|PDE9A|5152|phosphodiesterase 9A##NM_001001569|PDE9A|5152|phosphodiesterase 9A##NM_001001570|PDE9A|5152|phosphodiesterase 9A##NM_001001571|PDE9A|5152|phosphodiesterase 9A##NM_001001572|PDE9A|5152|phosphodiesterase 9A##NM_001001573|PDE9A|5152|phosphodiesterase 9A##NM_001001574|PDE9A|5152|phosphodiesterase 9A##NM_001001575|PDE9A|5152|phosphodiesterase 9A##NM_001001576|PDE9A|5152|phosphodiesterase 9A##NM_001001577|PDE9A|5152|phosphodiesterase 9A##NM_001001578|PDE9A|5152|phosphodiesterase 9A##NM_001001579|PDE9A|5152|phosphodiesterase 9A##NM_001001580|PDE9A|5152|phosphodiesterase 9A##NM_001001581|PDE9A|5152|phosphodiesterase 9A##NM_001001582|PDE9A|5152|phosphodiesterase 9A##NM_001001583|PDE9A|5152|phosphodiesterase 9A##NM_001001584|PDE9A|5152|phosphodiesterase 9A##NM_001001585|PDE9A|5152|phosphodiesterase 9A##NM_002606|PDE9A|5152|phosphodiesterase 9A##AF048837|PDE9A|5152|phosphodiesterase 9A##AY701187|PDE9A|5152|phosphodiesterase 9A##BC009047|PDE9A|5152|phosphodiesterase 9A##AK314679|PDE9A|5152|phosphodiesterase 9A##AY196299|PDE9A|5152|phosphodiesterase 9A##AY196300|PDE9A|5152|phosphodiesterase 9A##AY196301|PDE9A|5152|phosphodiesterase 9A##AY196302|PDE9A|5152|phosphodiesterase 9A##AY196303|PDE9A|5152|phosphodiesterase 9A##AY196304|PDE9A|5152|phosphodiesterase 9A##AY196305|PDE9A|5152|phosphodiesterase 9A##AY196306|PDE9A|5152|phosphodiesterase 9A##AY196307|PDE9A|5152|phosphodiesterase 9A##AY196308|PDE9A|5152|phosphodiesterase 9A##AY196309|PDE9A|5152|phosphodiesterase 9A##AY196310|PDE9A|5152|phosphodiesterase 9A##AY196311|PDE9A|5152|phosphodiesterase 9A##AY196312|PDE9A|5152|phosphodiesterase 9A##AY196313|PDE9A|5152|phosphodiesterase 9A##AY196314|PDE9A|5152|phosphodiesterase 9A##AK001307|PDE9A|5152|phosphodiesterase 9A##AK294112|PDE9A|5152|phosphodiesterase 9A##AF067223|PDE9A|5152|phosphodiesterase 9A##AF067224|PDE9A|5152|phosphodiesterase 9A##AF067225|PDE9A|5152|phosphodiesterase 9A##AF067226|PDE9A|5152|phosphodiesterase 9A##AY242121|PDE9A|5152|phosphodiesterase 9A##BT007016|PDE9A|5152|phosphodiesterase 9A##GQ129331|PDE9A|5152|phosphodiesterase 9A##GQ129332|PDE9A|5152|phosphodiesterase 9A##DQ892967|WDR4|10785|WD repeat domain 4##DQ896215|WDR4|10785|WD repeat domain 4##AK292923|WDR4|10785|WD repeat domain 4##AK315008|WDR4|10785|WD repeat domain 4##AJ243912|WDR4|10785|WD repeat domain 4##AJ243913|WDR4|10785|WD repeat domain 4##BC006341|WDR4|10785|WD repeat domain 4##BC001074|WDR4|10785|WD repeat domain 4##NM_018669|WDR4|10785|WD repeat domain 4##NM_033661|WDR4|10785|WD repeat domain 4##AK298015|WDR4|10785|WD repeat domain 4	1.00181	CTCF.p2:21:0.947
chr4	164933913	164934035	reg1012199.p2	9.855	+	AB463878 AK000675 AK301408 NM_017923	-399259	-	TSC_hg19_v1_chr4_+_164415868 BC011842	-518101	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-518132	+	NM_012403	184888	-	AK289711 NM_001166373	370432	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	944128	+	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39	0.088101	
chr5	149838509	149838620	reg1012052.p1	9.855	+	TSC_hg19_v1_chr5_-_149829301 BC003401 BC001126 BC006784 BC110792 AK312179 BC091474 NM_001025070 NM_001025071 NM_005617	-9273	-	TSC_hg19_v1_chr5_-_149829249 BC020515	-9320	-	TSC_hg19_v1_chr5_-_149792474 NM_001025158 NM_001025159 NM_004355	-46114	-	TSC_hg19_v1_chr5_+_149865341 AB209107	26875	+	AK292448 NM_001543 U36600	49149	+	TSC_hg19_v1_chr5_+_149980641 AL831818 NM_001166208	142078	+	BC003401|RPS14|6208|ribosomal protein S14##BC001126|RPS14|6208|ribosomal protein S14##BC006784|RPS14|6208|ribosomal protein S14##BC110792|RPS14|6208|ribosomal protein S14##AK312179|RPS14|6208|ribosomal protein S14##BC091474|RPS14|6208|ribosomal protein S14##NM_001025070|RPS14|6208|ribosomal protein S14##NM_001025071|RPS14|6208|ribosomal protein S14##NM_005617|RPS14|6208|ribosomal protein S14##BC020515|RPS14|6208|ribosomal protein S14##NM_001025158|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##NM_001025159|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##NM_004355|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##AK292448|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##NM_001543|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##U36600|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##AL831818|SYNPO|11346|synaptopodin##NM_001166208|SYNPO|11346|synaptopodin	0.990088	CTCF.p2:13:0.990
chr5	70743186	70743302	reg1012389.p1	9.855	+	BC171860 BC171919 U21911 AF078847 NM_001515 AK296578 BX537982 BC005345	-379790	-	AB048534 NM_004536 NM_022892	-422304	-	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	-522394	+	TSC_hg19_v1_chr5_+_70751479 NM_018429 AK057871 AF176695 BC032146 AJ238520	8232	+	AF298151 AF298152 TSC_hg19_v1_chr5_+_70751649 AB051476 BC146792 AB384624 BC161615	8419	+	TSC_hg19_v1_chr5_+_70883108 BC014897 NM_022132	139863	+	BC171860|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC171919|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##U21911|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AF078847|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##NM_001515|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AK296578|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##BX537982|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##BC005345|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AB048534|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_004536|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_022892|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric##NM_018429|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AK057871|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AF176695|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC032146|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AJ238520|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AF298151|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AF298152|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AB051476|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC146792|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC161615|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC014897|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##NM_022132|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)	0.407682	CTCF.p2:13:0.387
chr17	46385308	46385420	reg1011093.p1	9.854	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-200212	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-200379	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-206543	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	122174	-	TSC_hg19_v1_chr17_-_46507604 BC039040	122253	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	222907	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.867386	CTCF.p2:1:0.867
chr8	73199480	73199612	reg1014641.p1	9.854	+	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	-211712	-	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-442838	-	AF060154 TSC_hg19_v1_chr8_-_72756646	-442918	-	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	250097	+	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	721566	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	805896	-	NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##AF060154|MSC|9242|musculin##AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84	0.980651	CTCF.p2:5:0.981
chr9	140339820	140339963	reg1014208.p1	9.854	+	TSC_hg19_v1_chr9_-_140335810 BC141810 AY359088 NM_001033113 NM_198585	-4046	-	TSC_hg19_v1_chr9_+_140317844 BC041594 NM_006647 BC110840 AB095031 AY927790 AY927791 CU692004 AY255769 AK098341	-21989	+	NM_017820 TSC_hg19_v1_chr9_-_140317724	-22173	-	TSC_hg19_v1_chr9_-_140353612 BC110498	13741	-	TSC_hg19_v1_chr9_-_140353758 AK074602 BC072412	13869	-	AY255128 AY255129 AY255130 AY255131 AY255132 NM_001130969 NM_001130970 NM_001130971 NM_001178064 NM_015537 TSC_hg19_v1_chr9_-_140353787	13911	-	BC141810|ENTPD8|377841|ectonucleoside triphosphate diphosphohydrolase 8##AY359088|ENTPD8|377841|ectonucleoside triphosphate diphosphohydrolase 8##NM_001033113|ENTPD8|377841|ectonucleoside triphosphate diphosphohydrolase 8##NM_198585|ENTPD8|377841|ectonucleoside triphosphate diphosphohydrolase 8##BC041594|NOXA1|10811|NADPH oxidase activator 1##NM_006647|NOXA1|10811|NADPH oxidase activator 1##BC110840|NOXA1|10811|NADPH oxidase activator 1##AB095031|NOXA1|10811|NADPH oxidase activator 1##AY927790|NOXA1|10811|NADPH oxidase activator 1##AY927791|NOXA1|10811|NADPH oxidase activator 1##AY255769|NOXA1|10811|NADPH oxidase activator 1##AK098341|NOXA1|10811|NADPH oxidase activator 1##NM_017820|EXD3|54932|exonuclease 3'-5' domain containing 3##BC110498|NELF|26012|nasal embryonic LHRH factor##AK074602|NELF|26012|nasal embryonic LHRH factor##BC072412|NELF|26012|nasal embryonic LHRH factor##AY255128|NELF|26012|nasal embryonic LHRH factor##AY255129|NELF|26012|nasal embryonic LHRH factor##AY255130|NELF|26012|nasal embryonic LHRH factor##AY255131|NELF|26012|nasal embryonic LHRH factor##AY255132|NELF|26012|nasal embryonic LHRH factor##NM_001130969|NELF|26012|nasal embryonic LHRH factor##NM_001130970|NELF|26012|nasal embryonic LHRH factor##NM_001130971|NELF|26012|nasal embryonic LHRH factor##NM_001178064|NELF|26012|nasal embryonic LHRH factor##NM_015537|NELF|26012|nasal embryonic LHRH factor	0.209638	CTCF.p2:11:0.210
chr10	81160368	81160475	reg1011749.p1	9.853	+	TSC_hg19_v1_chr10_+_81107279 AB529152 CU678858 EU831447	-53134	+	BC013204 BC110299 TSC_hg19_v1_chr10_+_81107252	-53172	+	TSC_hg19_v1_chr10_+_81107228 M80254 BC005020	-53189	+	TSC_hg19_v1_chr10_-_81205381 AK308876 AK075279 BC053564 BC039249 BC028617 NM_153367	44839	-	BC070048 NM_001099692	111935	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	159730	-	EU831447|PPIF|10105|peptidylprolyl isomerase F##BC013204|PPIF|10105|peptidylprolyl isomerase F##BC110299|PPIF|10105|peptidylprolyl isomerase F##M80254|PPIF|10105|peptidylprolyl isomerase F##BC005020|PPIF|10105|peptidylprolyl isomerase F##AK308876|ZCCHC24|219654|zinc finger, CCHC domain containing 24##AK075279|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC053564|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC039249|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC028617|ZCCHC24|219654|zinc finger, CCHC domain containing 24##NM_153367|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2	0.591166	CTCF.p2:-7:0.259	CTCF.p2:-9:0.332
chr3	106990770	106990912	reg1014660.p1	9.853	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-31249	+	TSC_hg19_v1_chr3_-_106959482 BC036229	-31362	-	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-1403034	-	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	105469	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	251008	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	819032	-	AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule	0.0	
chr9	88817329	88817469	reg1012686.p1	9.853	+	TSC_hg19_v1_chr9_-_88715117 AK075557 AK092943 AX747818 NM_177937	-102315	-	TSC_hg19_v1_chr9_-_88714486 NM_016548	-102893	-	TSC_hg19_v1_chr9_-_88714474 AK027717	-102928	-	NM_001010907 BC108665	57134	-	TSC_hg19_v1_chr9_+_88897112 AK025086	79714	+	AB528754 AM393721 TSC_hg19_v1_chr9_-_88897454 BC053900 BC071621 AY015642 AL834356 AF284752 BC002675 AK055643 AK225937 AK309289 NM_030940	80045	-	AK075557|GOLM1|51280|golgi membrane protein 1##AK092943|GOLM1|51280|golgi membrane protein 1##NM_177937|GOLM1|51280|golgi membrane protein 1##NM_016548|GOLM1|51280|golgi membrane protein 1##AK027717|GOLM1|51280|golgi membrane protein 1##NM_001010907|C9orf153|389766|chromosome 9 open reading frame 153##BC108665|C9orf153|389766|chromosome 9 open reading frame 153##BC053900|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC071621|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AY015642|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AL834356|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AF284752|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC002675|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK055643|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK225937|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##NM_030940|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)	0.999126	CTCF.p2:3:0.999
chr1	189828657	189828778	reg1010580.p1	9.852	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-3030629	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-3179227	-	M33478 NM_002597	-3398490	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	618018	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	2298886	+	AY643711 NM_001039152	2457404	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.99113	CTCF.p2:-18:0.991
chr3	15447072	15447189	reg1011596.p1	9.852	+	BC006169 NM_001018009	-64243	-	TSC_hg19_v1_chr3_-_15374094 AL117422 AK313167 NM_004844	-73033	-	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	-73189	-	TSC_hg19_v1_chr3_-_15469037 BC022400 AK057791 NM_152396 AK293370	21888	-	TSC_hg19_v1_chr3_+_15469073 NM_033083 AK312330 AK304697 BC041329 AF272973 CU691982	22038	+	AK128401 NM_080538	93248	-	BC006169|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_001018009|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AL117422|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AK313167|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_004844|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC022400|METTL6|131965|methyltransferase like 6##AK057791|METTL6|131965|methyltransferase like 6##NM_152396|METTL6|131965|methyltransferase like 6##AK293370|METTL6|131965|methyltransferase like 6##NM_033083|EAF1|85403|ELL associated factor 1##AK312330|EAF1|85403|ELL associated factor 1##AK304697|EAF1|85403|ELL associated factor 1##BC041329|EAF1|85403|ELL associated factor 1##AF272973|EAF1|85403|ELL associated factor 1##AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	0.965481	CTCF.p2:0:0.965
chr6	82463729	82463853	reg1011737.p5	9.852	+	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	-1380	-	AY740520 FJ211061 CU674334 CU675631 TSC_hg19_v1_chr6_-_82461975	-1870	-	TSC_hg19_v1_chr6_+_80816397 AK289977 BC040139 M55575 AB529112 BT020063 X52446	-1647354	+	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	493622	-	TSC_hg19_v1_chr6_-_82957441 NM_015525 DQ005633 DQ005634	493677	-	AK291170 NM_006670	609131	+	AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##AY740520|FAM46A|55603|family with sequence similarity 46, member A##AK289977|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC040139|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##M55575|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BT020063|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##X52446|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##NM_015525|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005633|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005634|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein	0.529569	CTCF.p2:-7:0.530
chr1	39658307	39658429	reg1011397.p1	9.851	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-111280	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	-166360	+	TSC_hg19_v1_chr1_+_39456956 NM_001136275 NM_024595 AK022728 AK092624 AX747634 AK124799 AK126262 AK223276 AK298890 AK303098 BC001498 BC119745 BC119746 AY326465	-201306	+	NM_015038	216807	+	TSC_hg19_v1_chr1_+_39922264 AK023821	263951	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	298977	+	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_001136275|AKIRIN1|79647|akirin 1##NM_024595|AKIRIN1|79647|akirin 1##AK022728|AKIRIN1|79647|akirin 1##AK092624|AKIRIN1|79647|akirin 1##AK124799|AKIRIN1|79647|akirin 1##AK126262|AKIRIN1|79647|akirin 1##AK223276|AKIRIN1|79647|akirin 1##AK298890|AKIRIN1|79647|akirin 1##AK303098|AKIRIN1|79647|akirin 1##BC001498|AKIRIN1|79647|akirin 1##BC119745|AKIRIN1|79647|akirin 1##BC119746|AKIRIN1|79647|akirin 1##AY326465|AKIRIN1|79647|akirin 1##NM_015038|KIAA0754|643314|KIAA0754##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a	0.977891	CTCF.p2:-13:0.978
chr16	30124217	30124334	reg1012095.p1	9.851	+	AK097453 TSC_hg19_v1_chr16_+_30108408	-15872	+	TSC_hg19_v1_chr16_+_30107748 AK095480 BC048809	-16507	+	BC005009 TSC_hg19_v1_chr16_-_30107535 BC050664 NM_031477 AB098737 NM_001145524 AF305622 AK022409	-16730	-	Z36775 TSC_hg19_v1_chr16_-_30124859 AK026256 AK225450 BC002714 NM_024307	578	-	TSC_hg19_v1_chr16_-_30134504 BX537897 AK091009 Z11696 M84490	10119	-	AB385073 AY033607 AY033608 DQ399291 DQ893440 DQ896778 TSC_hg19_v1_chr16_-_30134542 BC013992 AK307995	10264	-	BC005009|YPEL3|83719|yippee-like 3 (Drosophila)##BC050664|YPEL3|83719|yippee-like 3 (Drosophila)##NM_031477|YPEL3|83719|yippee-like 3 (Drosophila)##AB098737|YPEL3|83719|yippee-like 3 (Drosophila)##NM_001145524|YPEL3|83719|yippee-like 3 (Drosophila)##AF305622|YPEL3|83719|yippee-like 3 (Drosophila)##AK022409|YPEL3|83719|yippee-like 3 (Drosophila)##AK026256|GDPD3|79153|glycerophosphodiester phosphodiesterase domain containing 3##AK225450|GDPD3|79153|glycerophosphodiester phosphodiesterase domain containing 3##BC002714|GDPD3|79153|glycerophosphodiester phosphodiesterase domain containing 3##NM_024307|GDPD3|79153|glycerophosphodiester phosphodiesterase domain containing 3##BX537897|MAPK3|5595|mitogen-activated protein kinase 3##AK091009|MAPK3|5595|mitogen-activated protein kinase 3##Z11696|MAPK3|5595|mitogen-activated protein kinase 3##M84490|MAPK3|5595|mitogen-activated protein kinase 3##AY033607|MAPK3|5595|mitogen-activated protein kinase 3##AY033608|MAPK3|5595|mitogen-activated protein kinase 3##DQ399291|MAPK3|5595|mitogen-activated protein kinase 3##DQ893440|MAPK3|5595|mitogen-activated protein kinase 3##DQ896778|MAPK3|5595|mitogen-activated protein kinase 3##BC013992|MAPK3|5595|mitogen-activated protein kinase 3##AK307995|MAPK3|5595|mitogen-activated protein kinase 3	0.997067	CTCF.p2:-40:0.997
chr16	70805096	70805227	reg1012895.p1	9.851	+	TSC_hg19_v1_chr16_-_70719957 NM_138383	-85231	-	AB115770 TSC_hg19_v1_chr16_-_70719700	-85463	-	BC002770 TSC_hg19_v1_chr16_-_70713956	-91218	-	BC110852 TSC_hg19_v1_chr16_-_70835007 BC125108 BC125109	29784	-	TSC_hg19_v1_chr16_-_70835044 AK297564	29889	-	NM_018052 TSC_hg19_v1_chr16_-_70835060	29899	-	NM_138383|MTSS1L|92154|metastasis suppressor 1-like##AB115770|MTSS1L|92154|metastasis suppressor 1-like##BC002770|MTSS1L|92154|metastasis suppressor 1-like##BC110852|VAC14|55697|Vac14 homolog (S. cerevisiae)##BC125108|VAC14|55697|Vac14 homolog (S. cerevisiae)##BC125109|VAC14|55697|Vac14 homolog (S. cerevisiae)##AK297564|VAC14|55697|Vac14 homolog (S. cerevisiae)##NM_018052|VAC14|55697|Vac14 homolog (S. cerevisiae)	0.895465	CTCF.p2:7:0.895
chr3	157290473	157290586	reg1011989.p1	9.851	+	NM_001099777 NM_001130001 NM_001130002 NM_001243729 BC126187 BC126189 BC144066 BC029129 BC010062	-29347	+	BC078142 BC057999 NM_001167915 NM_001167916	-69141	-	BC111017 AB051479 NM_001167911 NM_001167912	-69398	-	TSC_hg19_v1_chr3_-_157823531 AK309293	533010	-	HQ258019 AJ002367 TSC_hg19_v1_chr3_-_157823847 BC008829 NM_001163678 NM_003030 NM_006884	533354	-	TSC_hg19_v1_chr3_+_157827910 AK290334 BC006982 NM_016625 AF208853 BC010357	537362	+	NM_001099777|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130001|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130002|C3orf55|152078|chromosome 3 open reading frame 55##NM_001243729|C3orf55|152078|chromosome 3 open reading frame 55##BC126187|C3orf55|152078|chromosome 3 open reading frame 55##BC126189|C3orf55|152078|chromosome 3 open reading frame 55##BC144066|C3orf55|152078|chromosome 3 open reading frame 55##BC029129|C3orf55|152078|chromosome 3 open reading frame 55##BC010062|C3orf55|152078|chromosome 3 open reading frame 55##BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##HQ258019|SHOX2|6474|short stature homeobox 2##AJ002367|SHOX2|6474|short stature homeobox 2##BC008829|SHOX2|6474|short stature homeobox 2##NM_001163678|SHOX2|6474|short stature homeobox 2##NM_003030|SHOX2|6474|short stature homeobox 2##NM_006884|SHOX2|6474|short stature homeobox 2##AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1##NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1##AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1	0.999776	CTCF.p2:9:1.000
chr5	93137114	93137219	reg1011178.p1	9.851	+	CU688688 EU446850 BC029532 AB527965 AK098546 NM_153216	-59914	-	AK309742 TSC_hg19_v1_chr5_-_92957232	-179955	-	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	-216498	+	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	310154	-	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	817091	-	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	817207	+	EU446850|POU5F2|134187|POU domain class 5, transcription factor 2##BC029532|POU5F2|134187|POU domain class 5, transcription factor 2##AK098546|POU5F2|134187|POU domain class 5, transcription factor 2##NM_153216|POU5F2|134187|POU domain class 5, transcription factor 2##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32	0.996777	CTCF.p2:11:0.997
chr19	3250845	3250962	reg1010691.p1	9.850	+	BC047522 DQ891648 DQ894837 TSC_hg19_v1_chr19_+_3224751 CU690430 AF329266	-26160	+	BC028101 NM_021938 AB209067 NM_001172673 TSC_hg19_v1_chr19_+_3224705	-26199	+	TSC_hg19_v1_chr19_+_3198814 BC008920	-52078	+	TSC_hg19_v1_chr19_+_3359531 NM_001245005 NM_205843 X12492 AK304816 AK289885	108553	+	TSC_hg19_v1_chr19_+_3366562 NM_001245002 NM_001245004 NM_005597 BC012120	115652	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	115677	+	BC047522|CELF5|60680|CUGBP, Elav-like family member 5##DQ891648|CELF5|60680|CUGBP, Elav-like family member 5##DQ894837|CELF5|60680|CUGBP, Elav-like family member 5##AF329266|CELF5|60680|CUGBP, Elav-like family member 5##BC028101|CELF5|60680|CUGBP, Elav-like family member 5##NM_021938|CELF5|60680|CUGBP, Elav-like family member 5##AB209067|CELF5|60680|CUGBP, Elav-like family member 5##NM_001172673|CELF5|60680|CUGBP, Elav-like family member 5##BC008920|NCLN|56926|nicalin##NM_001245005|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_205843|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X12492|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK304816|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK289885|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245002|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245004|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_005597|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC012120|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)	0.998705	CTCF.p2:0:0.999
chr20	37262379	37262520	reg1013781.p1	9.850	+	TSC_hg19_v1_chr20_+_37230452 NM_001164431	-31936	+	BC029594 NM_001018082 BC119704 BC119705	-52609	+	TSC_hg19_v1_chr20_+_37101489 AB033045 BC047482 NM_020336 AK304242 CR936800	-160941	+	NM_080552 TSC_hg19_v1_chr20_+_37353115	90663	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	90710	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	114663	+	NM_001164431|ARHGAP40|343578|Rho GTPase activating protein 40##BC029594|ADIG|149685|adipogenin##NM_001018082|ADIG|149685|adipogenin##BC119704|ADIG|149685|adipogenin##BC119705|ADIG|149685|adipogenin##AB033045|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##BC047482|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##NM_020336|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##AK304242|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##CR936800|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##NM_080552|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)	0.990223	CTCF.p2:6:0.990
chr3	98891993	98892126	reg1013628.p1	9.849	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-271567	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-440472	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-440814	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	465391	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	644686	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	702932	-	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like	0.929178	CTCF.p2:15:0.929
chr7	120365631	120365756	reg1012079.p1	9.849	+	AK307139 AB028967 NM_012281	-451989	+	NM_019644 AK302407	-2500959	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-2541522	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	132327	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	132467	-	AK000096 NM_019071 NM_198267 TSC_hg19_v1_chr7_+_120590832 AF161419 BC009777 BC093091 AY007790 AK291905 AF074968 BC073865 AF180298 BC062634 BC093689 BC101609 BC143316 BC009776 BC010851 BC146417 BC153171 AB463778	225188	+	AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12##AK000096|ING3|54556|inhibitor of growth family, member 3##NM_019071|ING3|54556|inhibitor of growth family, member 3##NM_198267|ING3|54556|inhibitor of growth family, member 3##AF161419|ING3|54556|inhibitor of growth family, member 3##BC009777|ING3|54556|inhibitor of growth family, member 3##BC093091|ING3|54556|inhibitor of growth family, member 3##AY007790|ING3|54556|inhibitor of growth family, member 3##AK291905|ING3|54556|inhibitor of growth family, member 3##AF074968|ING3|54556|inhibitor of growth family, member 3##BC073865|ING3|54556|inhibitor of growth family, member 3##AF180298|ING3|54556|inhibitor of growth family, member 3##BC062634|ING3|54556|inhibitor of growth family, member 3##BC093689|ING3|54556|inhibitor of growth family, member 3##BC101609|ING3|54556|inhibitor of growth family, member 3##BC143316|ING3|54556|inhibitor of growth family, member 3##BC009776|ING3|54556|inhibitor of growth family, member 3##BC010851|ING3|54556|inhibitor of growth family, member 3##BC146417|ING3|54556|inhibitor of growth family, member 3##BC153171|ING3|54556|inhibitor of growth family, member 3	0.489158	CTCF.p2:-6:0.489
chr8	119427287	119427436	reg1013273.p1	9.849	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	-303400	-	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	-894319	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	-894403	+	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	206764	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	206846	-	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	536859	-	AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##NM_080651|MED30|90390|mediator complex subunit 30##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	0.074211	
chr15	38991982	38992103	reg1011590.p1	9.848	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-3244	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-135111	-	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-245697	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	550883	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	881287	+	AK093308 AX748045 BC045191 NM_152597	1082986	-	AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.997083	CTCF.p2:-1:0.997
chr7	128911717	128911829	reg1011470.p2	9.848	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	-46944	+	BC009989 NM_005631	-83061	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-216568	-	TSC_hg19_v1_chr7_+_129007981 NM_001130723	96213	+	TSC_hg19_v1_chr7_+_129008062 AK025372	96315	+	AK316073 NM_001130722	103710	+	NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2##AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2	0.80379	CTCF.p2:4:0.804
chr7	135197001	135197123	reg1011425.p1	9.848	+	BC035590 U71267 U71268 AL389980 TSC_hg19_v1_chr7_-_135194851 AK314540 AK074493 AK300365 NM_001008225 NM_001190847 NM_001190848 NM_001190849 NM_001190850 NM_013316	-2202	-	AB464251 AF513502 NM_182489	-280332	+	TSC_hg19_v1_chr7_-_134896270 AK001606 BX640957 NM_014149	-300771	-	TSC_hg19_v1_chr7_+_135242675 NM_015135 BC136624 AK297307 BC146784 D86978	45626	+	TSC_hg19_v1_chr7_+_135347230 NM_001130929 BC063529 BC073942 BC021734 BC107765 BC047474 BC016741 BC040872	150199	+	AF169301 NM_012450 BC030689 TSC_hg19_v1_chr7_-_135412940 AB208809	215874	-	BC035590|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71267|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71268|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AL389980|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK314540|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK074493|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK300365|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001008225|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190847|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190848|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190849|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190850|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_013316|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AB464251|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AF513502|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##NM_182489|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AK001606|WDR91|29062|WD repeat domain 91##BX640957|WDR91|29062|WD repeat domain 91##NM_014149|WDR91|29062|WD repeat domain 91##NM_015135|NUP205|23165|nucleoporin 205kDa##BC136624|NUP205|23165|nucleoporin 205kDa##AK297307|NUP205|23165|nucleoporin 205kDa##BC146784|NUP205|23165|nucleoporin 205kDa##D86978|NUP205|23165|nucleoporin 205kDa##NM_001130929|C7orf73|647087|chromosome 7 open reading frame 73##BC063529|C7orf73|647087|chromosome 7 open reading frame 73##BC073942|C7orf73|647087|chromosome 7 open reading frame 73##BC021734|C7orf73|647087|chromosome 7 open reading frame 73##BC107765|C7orf73|647087|chromosome 7 open reading frame 73##BC047474|C7orf73|647087|chromosome 7 open reading frame 73##BC016741|C7orf73|647087|chromosome 7 open reading frame 73##BC040872|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##AF169301|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##NM_012450|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##BC030689|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##AB208809|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4	0.912229	CTCF.p2:-13:0.912
chr7	73043687	73043796	reg1024607.p2	9.848	+	TSC_hg19_v1_chr7_-_73038853 AF245470 AF245471 AF245472 AF245473 AF245474 AB527610 BC012925 AF156603 NM_032951 NM_032952 NM_032953 NM_032954	-4871	-	TSC_hg19_v1_chr7_-_72993012 NM_012453	-50716	-	TSC_hg19_v1_chr7_-_72992936 BC047354 AL080162	-50779	-	TSC_hg19_v1_chr7_+_73082160 AY081952 BC029730 NM_001077621	38473	+	TSC_hg19_v1_chr7_+_73082320 BC064621	38582	+	TSC_hg19_v1_chr7_-_73097770 AK303989 CU674979 AK058113 AF412025 BC005056 AK094305 NM_032317	54017	-	AF245470|MLXIPL|51085|MLX interacting protein-like##AF245471|MLXIPL|51085|MLX interacting protein-like##AF245472|MLXIPL|51085|MLX interacting protein-like##AF245473|MLXIPL|51085|MLX interacting protein-like##AF245474|MLXIPL|51085|MLX interacting protein-like##BC012925|MLXIPL|51085|MLX interacting protein-like##AF156603|MLXIPL|51085|MLX interacting protein-like##NM_032951|MLXIPL|51085|MLX interacting protein-like##NM_032952|MLXIPL|51085|MLX interacting protein-like##NM_032953|MLXIPL|51085|MLX interacting protein-like##NM_032954|MLXIPL|51085|MLX interacting protein-like##NM_012453|TBL2|26608|transducin (beta)-like 2##BC047354|TBL2|26608|transducin (beta)-like 2##AL080162|TBL2|26608|transducin (beta)-like 2##AY081952|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##BC029730|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##NM_001077621|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##BC064621|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##AK058113|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30##AF412025|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30##BC005056|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30##AK094305|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30##NM_032317|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30	0.486559	CTCF.p2:11:0.487
chr3	16925636	16925764	reg1012061.p1	9.847	+	U65918 U66726 U66078 BC027595 NM_001351	-278734	-	BX648638 AK303026 NM_001190811	-279430	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	-370476	-	AB029015 NM_001144382	751	+	BC036392 NM_015184	48881	+	AK310539 NM_001134381	815811	-	U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5	1.030262	CTCF.p2:0:0.997
chr6	39070181	39070289	reg1012757.p1	9.847	+	BC112126 BC113493 NM_002062 TSC_hg19_v1_chr6_+_39016556 U01104 L23503 AB463688 U01156 U01157	-53649	+	AF527621 NM_001206927	-387119	+	TSC_hg19_v1_chr6_-_38670922 NM_006708	-399298	-	AF086405 TSC_hg19_v1_chr6_-_39072506	2224	-	TSC_hg19_v1_chr6_-_39082938 CR627244 AK001963 NM_018322 EU832483 EU832563 BC022007	12611	-	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	127005	-	BC112126|GLP1R|2740|glucagon-like peptide 1 receptor##BC113493|GLP1R|2740|glucagon-like peptide 1 receptor##NM_002062|GLP1R|2740|glucagon-like peptide 1 receptor##U01104|GLP1R|2740|glucagon-like peptide 1 receptor##L23503|GLP1R|2740|glucagon-like peptide 1 receptor##U01156|GLP1R|2740|glucagon-like peptide 1 receptor##U01157|GLP1R|2740|glucagon-like peptide 1 receptor##AF527621|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_001206927|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_006708|GLO1|2739|glyoxalase I##AF086405|C6orf64|55776|chromosome 6 open reading frame 64##CR627244|C6orf64|55776|chromosome 6 open reading frame 64##AK001963|C6orf64|55776|chromosome 6 open reading frame 64##NM_018322|C6orf64|55776|chromosome 6 open reading frame 64##EU832483|C6orf64|55776|chromosome 6 open reading frame 64##EU832563|C6orf64|55776|chromosome 6 open reading frame 64##BC022007|C6orf64|55776|chromosome 6 open reading frame 64##AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5	0.152988	
chr10	93518464	93518581	reg1011534.p1	9.846	+	BX537399 NM_005398 TSC_hg19_v1_chr10_-_93392859	-125664	-	AF087874 Y18207 TSC_hg19_v1_chr10_-_93392829 AK299398 AK313149	-125708	-	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	-125761	-	AF438201 TSC_hg19_v1_chr10_+_93558136	39581	+	TSC_hg19_v1_chr10_+_93558164 AF305081 NM_025235	39630	+	AK314612 TSC_hg19_v1_chr10_+_93558182 AF309033	39667	+	BX537399|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##NM_005398|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AF087874|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##Y18207|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK299398|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK313149|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AF438201|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF305081|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##NM_025235|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AK314612|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF309033|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	0.935892	CTCF.p2:-14:0.936
chr10	99674647	99674755	reg1010095.p1	9.846	+	BC110810 NM_001010917	-64707	+	BC050435 AF117758 NM_003015	-142968	-	NM_001002261 AL834235	-176435	+	AK292084 AJ276171 TSC_hg19_v1_chr10_-_99790379	115661	-	AK057190 NM_001206528 NM_018058	115883	-	NM_014472 AK292546 TSC_hg19_v1_chr10_+_99894414	219696	+	BC110810|GOLGA7B|401647|golgin A7 family, member B##NM_001010917|GOLGA7B|401647|golgin A7 family, member B##BC050435|SFRP5|6425|secreted frizzled-related protein 5##AF117758|SFRP5|6425|secreted frizzled-related protein 5##NM_003015|SFRP5|6425|secreted frizzled-related protein 5##NM_001002261|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AL834235|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK292084|CRTAC1|55118|cartilage acidic protein 1##AJ276171|CRTAC1|55118|cartilage acidic protein 1##AK057190|CRTAC1|55118|cartilage acidic protein 1##NM_001206528|CRTAC1|55118|cartilage acidic protein 1##NM_018058|CRTAC1|55118|cartilage acidic protein 1##NM_014472|C10orf28|27291|chromosome 10 open reading frame 28##AK292546|C10orf28|27291|chromosome 10 open reading frame 28	0.999862	CTCF.p2:-13:1.000
chr21	33630781	33630896	reg1011532.p1	9.846	+	TSC_hg19_v1_chr21_+_33245863 AJ271722 NM_014586	-385118	+	TSC_hg19_v1_chr21_-_33104407 BC014921 NM_001145444 NM_001145445 NM_020706	-526402	-	BC043353 TSC_hg19_v1_chr21_-_33104396	-526445	-	CU692128 TSC_hg19_v1_chr21_-_33651338 AF387845 AF231921 AK075281 BC042917 NM_018944 AK312073	20557	-	AF454915 AF454916 NM_178817 NM_206898	33285	+	AF231919 TSC_hg19_v1_chr21_-_33765328 NM_014825	134418	-	AJ271722|HUNK|30811|hormonally up-regulated Neu-associated kinase##NM_014586|HUNK|30811|hormonally up-regulated Neu-associated kinase##BC014921|SCAF4|57466|SR-related CTD-associated factor 4##NM_001145444|SCAF4|57466|SR-related CTD-associated factor 4##NM_001145445|SCAF4|57466|SR-related CTD-associated factor 4##NM_020706|SCAF4|57466|SR-related CTD-associated factor 4##BC043353|SCAF4|57466|SR-related CTD-associated factor 4##AF387845|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AF231921|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AK075281|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##BC042917|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##NM_018944|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AK312073|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AF454915|MRAP|56246|melanocortin 2 receptor accessory protein##AF454916|MRAP|56246|melanocortin 2 receptor accessory protein##NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein##NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein##AF231919|URB1|9875|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)##NM_014825|URB1|9875|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)	0.051337	
chr12	16512965	16513066	reg1011071.p2	9.845	+	J03746 NM_145764	-6665	+	TSC_hg19_v1_chr12_+_16500585 BC062473 NM_020300 AK291148 AK309707 BC005923 BC056863 NM_145791	-12396	+	NM_145792	-12940	+	TSC_hg19_v1_chr12_-_16757958 AK294651 AB044745	244997	-	NM_001243611 TSC_hg19_v1_chr12_-_16758338	245310	-	AK316021 AK294474 NM_001243612	245856	-	J03746|MGST1|4257|microsomal glutathione S-transferase 1##NM_145764|MGST1|4257|microsomal glutathione S-transferase 1##NM_020300|MGST1|4257|microsomal glutathione S-transferase 1##AK291148|MGST1|4257|microsomal glutathione S-transferase 1##AK309707|MGST1|4257|microsomal glutathione S-transferase 1##BC005923|MGST1|4257|microsomal glutathione S-transferase 1##BC056863|MGST1|4257|microsomal glutathione S-transferase 1##NM_145791|MGST1|4257|microsomal glutathione S-transferase 1##NM_145792|MGST1|4257|microsomal glutathione S-transferase 1##AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243611|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK316021|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294474|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243612|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	0.990144	CTCF.p2:0:0.990
chr1	39283924	39284051	reg1013012.p1	9.845	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-771538	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-805557	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-805602	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	41399	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	55029	-	AK312811 BC051675 AK123051 NM_030772	63290	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.997295	CTCF.p2:20:0.997
chr14	73762019	73762157	reg1014466.p1	9.845	+	NM_173462 TSC_hg19_v1_chr14_+_73704238 BC042057 BC136623 BC144315	-57837	+	AJ008005 TSC_hg19_v1_chr14_+_73603214	-158876	+	TSC_hg19_v1_chr14_+_73603184 L42110	-158908	+	BX248775 TSC_hg19_v1_chr14_-_73925232 BX647137 AF171938 AF171939 AF171940 AF171941 BX248073 AF015040 AK315130 BC020788	163144	-	TSC_hg19_v1_chr14_-_73925274 BX248781	163179	-	TSC_hg19_v1_chr14_-_73925284 BC068476 NM_001005743 NM_001005744 NM_001005745 NM_003744	163203	-	NM_173462|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BC042057|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BC136623|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BC144315|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##AJ008005|PSEN1|5663|presenilin 1##L42110|PSEN1|5663|presenilin 1##BX248775|NUMB|8650|numb homolog (Drosophila)##BX647137|NUMB|8650|numb homolog (Drosophila)##AF171938|NUMB|8650|numb homolog (Drosophila)##AF171939|NUMB|8650|numb homolog (Drosophila)##AF171940|NUMB|8650|numb homolog (Drosophila)##AF171941|NUMB|8650|numb homolog (Drosophila)##BX248073|NUMB|8650|numb homolog (Drosophila)##AF015040|NUMB|8650|numb homolog (Drosophila)##AK315130|NUMB|8650|numb homolog (Drosophila)##BC020788|NUMB|8650|numb homolog (Drosophila)##BX248781|NUMB|8650|numb homolog (Drosophila)##BC068476|NUMB|8650|numb homolog (Drosophila)##NM_001005743|NUMB|8650|numb homolog (Drosophila)##NM_001005744|NUMB|8650|numb homolog (Drosophila)##NM_001005745|NUMB|8650|numb homolog (Drosophila)##NM_003744|NUMB|8650|numb homolog (Drosophila)	0.997862	CTCF.p2:10:0.998
chr20	56812261	56812388	reg1011908.p2	9.845	+	NM_178456 BC035405	-86337	+	NM_199171	-525784	-	TSC_hg19_v1_chr20_-_56285634 BC080635 AF224278 AY128643 NM_199169 NM_199170 AX775887 AK296199	-526702	-	AK299330 AK057583 BC100979 BC100980 TSC_hg19_v1_chr20_-_56884511	72175	-	TSC_hg19_v1_chr20_+_56884770 NM_020673 BC063457 AF091034 AJ276210	72458	+	TSC_hg19_v1_chr20_+_56884847 BC015710	72520	+	NM_178456|C20orf85|128602|chromosome 20 open reading frame 85##BC035405|C20orf85|128602|chromosome 20 open reading frame 85##NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##BC080635|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AF224278|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AY128643|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199169|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199170|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK296199|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK299330|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##AK057583|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100979|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100980|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##NM_020673|RAB22A|57403|RAB22A, member RAS oncogene family##BC063457|RAB22A|57403|RAB22A, member RAS oncogene family##AF091034|RAB22A|57403|RAB22A, member RAS oncogene family##AJ276210|RAB22A|57403|RAB22A, member RAS oncogene family##BC015710|RAB22A|57403|RAB22A, member RAS oncogene family	0.316351	CTCF.p2:-13:0.316
chr7	22563679	22563791	reg1012034.p1	9.845	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	-23888	-	AL833195 NM_012294	-167214	-	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-578253	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	203088	+	TSC_hg19_v1_chr7_+_22767104 X04403	203383	+	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	298708	-	BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	0.999851	CTCF.p2:-15:1.000
chr1	110596604	110596705	reg1009696.p1	9.844	+	AK291059 TSC_hg19_v1_chr1_+_110577249 AL834196 AB051548 AB463038	-19401	+	BC094786 TSC_hg19_v1_chr1_+_110577243	-19412	+	TSC_hg19_v1_chr1_+_110577229 BC119814 BC121793 NM_033088	-19425	+	AF008203 BC112007 BC113428 NM_006492	16623	-	AK098556 NM_203412 BC058929	58421	+	NM_001010898 AK289982 TSC_hg19_v1_chr1_+_110693135	96480	+	AK291059|FAM40A|85369|family with sequence similarity 40, member A##AL834196|FAM40A|85369|family with sequence similarity 40, member A##AB051548|FAM40A|85369|family with sequence similarity 40, member A##BC094786|FAM40A|85369|family with sequence similarity 40, member A##BC119814|FAM40A|85369|family with sequence similarity 40, member A##BC121793|FAM40A|85369|family with sequence similarity 40, member A##NM_033088|FAM40A|85369|family with sequence similarity 40, member A##AF008203|ALX3|257|ALX homeobox 3##BC112007|ALX3|257|ALX homeobox 3##BC113428|ALX3|257|ALX homeobox 3##NM_006492|ALX3|257|ALX homeobox 3##AK098556|UBL4B|164153|ubiquitin-like 4B##NM_203412|UBL4B|164153|ubiquitin-like 4B##BC058929|UBL4B|164153|ubiquitin-like 4B##NM_001010898|SLC6A17|388662|solute carrier family 6, member 17##AK289982|SLC6A17|388662|solute carrier family 6, member 17	0.999006	CTCF.p2:-21:0.999
chr11	67347004	67347179	reg1012378.p1	9.844	+	AB528802 AF169154 BC018476 NM_016366	-56243	-	BC002850 NM_005851 AK308725 TSC_hg19_v1_chr11_-_67276169	-70952	-	TSC_hg19_v1_chr11_-_67275634 BT006909 CR457050 CR542042 AK310197 AK001498 BC016704 AF089814	-71458	-	NM_000852 TSC_hg19_v1_chr11_+_67351145	4015	+	TSC_hg19_v1_chr11_+_67351285 AY887902 BC010915 BC044846 X15480 U62589 U30897	4198	+	NM_001166102 NM_007103 TSC_hg19_v1_chr11_+_67374428 AF092131 AF053070 BC008146 AK310537 AK223061 AK293522 AK300726 BC015645 AB590249 CR456739 CU677379 CU678877 DQ893236 DQ896566 AK316122	27310	+	AF169154|CABP2|51475|calcium binding protein 2##BC018476|CABP2|51475|calcium binding protein 2##NM_016366|CABP2|51475|calcium binding protein 2##BC002850|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##NM_005851|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BT006909|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR457050|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR542042|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK310197|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK001498|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BC016704|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AF089814|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##NM_000852|GSTP1|2950|glutathione S-transferase pi 1##BC010915|GSTP1|2950|glutathione S-transferase pi 1##BC044846|GSTP1|2950|glutathione S-transferase pi 1##X15480|GSTP1|2950|glutathione S-transferase pi 1##U62589|GSTP1|2950|glutathione S-transferase pi 1##U30897|GSTP1|2950|glutathione S-transferase pi 1##NM_001166102|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_007103|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF092131|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF053070|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC008146|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK310537|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK223061|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK293522|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK300726|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC015645|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##CR456739|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ893236|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ896566|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK316122|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa	0.980988	CTCF.p2:29:0.981
chr4	187123137	187123241	reg1011553.p2	9.844	+	TSC_hg19_v1_chr4_+_187112938 AK122600 AK126473 BC048253 AY358619 CU687474	-10219	+	TSC_hg19_v1_chr4_+_187112832 BC035933 BC060857	-10387	+	TSC_hg19_v1_chr4_+_187112641 AY422002 NM_207352	-10529	+	AK292624 AK297672 M13143 NM_000892 AK313378 BC117349 BC117351 BC143911	25479	+	NM_000128 BC020617	63932	+	TSC_hg19_v1_chr4_+_187187342 AK313195 BC029374 BC119014 BC122863 M13142 AF045649	64190	+	AK122600|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##AK126473|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##BC048253|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##AY358619|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##BC035933|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##BC060857|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##AY422002|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##NM_207352|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##AK292624|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##AK297672|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##M13143|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##NM_000892|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##AK313378|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##BC117349|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##BC117351|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##BC143911|KLKB1|3818|kallikrein B, plasma (Fletcher factor) 1##NM_000128|F11|2160|coagulation factor XI##BC020617|F11|2160|coagulation factor XI##AK313195|F11|2160|coagulation factor XI##BC029374|F11|2160|coagulation factor XI##BC119014|F11|2160|coagulation factor XI##BC122863|F11|2160|coagulation factor XI##M13142|F11|2160|coagulation factor XI##AF045649|F11|2160|coagulation factor XI	0.134796	
chr5	33997643	33997733	reg1009793.p1	9.844	+	CU687878 CU678524 AF172849 BC064405 BC003597 NM_001012509 NM_016180	-12955	-	D88437 NM_016568	-61198	+	TSC_hg19_v1_chr5_-_33892294 AJ250725	-105393	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	10475	-	TSC_hg19_v1_chr5_-_34008240 AK225749	10556	-	EU399231 EU399232 BC112925 AF329837 BC120990 AF326976 AY358388 AK075533 BX640995 AK315921 AK295968 NM_030945 NM_181435	45614	-	AF172849|SLC45A2|51151|solute carrier family 45, member 2##BC064405|SLC45A2|51151|solute carrier family 45, member 2##BC003597|SLC45A2|51151|solute carrier family 45, member 2##NM_001012509|SLC45A2|51151|solute carrier family 45, member 2##NM_016180|SLC45A2|51151|solute carrier family 45, member 2##D88437|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##NM_016568|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase##AK225749|AMACR|23600|alpha-methylacyl-CoA racemase##EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3	0.913882	CTCF.p2:-5:0.914
chr6_qbl_hap6	2860112	2860223	reg1012739.p1	9.844	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999083	CTCF.p2:1:0.999
chr2	120417763	120417877	reg1012000.p1	9.843	+	AK293665 NM_001029996 TSC_hg19_v1_chr2_+_120302024 BC036530 AK304416	-115778	+	TSC_hg19_v1_chr2_-_120282060 BC035757	-135757	-	TSC_hg19_v1_chr2_-_120282018 AK314638 NM_002980	-135801	-	TSC_hg19_v1_chr2_+_120436745 AK130088 NM_001105198 NM_001105199 NM_030577 AK096890 AK299078 BC004404	18914	+	TSC_hg19_v1_chr2_+_120436776 AK057313 AK308503 AK311734	18961	+	M68941 NM_002830 TSC_hg19_v1_chr2_+_120517497 AK314836 BC010674	99580	+	AK293665|PCDP1|200373|primary ciliary dyskinesia protein 1##NM_001029996|PCDP1|200373|primary ciliary dyskinesia protein 1##BC036530|PCDP1|200373|primary ciliary dyskinesia protein 1##AK304416|PCDP1|200373|primary ciliary dyskinesia protein 1##BC035757|SCTR|6344|secretin receptor##AK314638|SCTR|6344|secretin receptor##NM_002980|SCTR|6344|secretin receptor##AK130088|TMEM177|80775|transmembrane protein 177##NM_001105198|TMEM177|80775|transmembrane protein 177##NM_001105199|TMEM177|80775|transmembrane protein 177##NM_030577|TMEM177|80775|transmembrane protein 177##AK096890|TMEM177|80775|transmembrane protein 177##AK299078|TMEM177|80775|transmembrane protein 177##BC004404|TMEM177|80775|transmembrane protein 177##AK057313|LOC100125918|100125918|uncharacterized LOC100125918##AK308503|TMEM177|80775|transmembrane protein 177##M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)	0.999699	CTCF.p2:-12:1.000
chr3	15160276	15160367	reg1010999.p2	9.843	+	TSC_hg19_v1_chr3_-_15140655 AK291288 AK301735 AL833545 NM_022340	-19668	-	TSC_hg19_v1_chr3_-_15140649 BC032628	-19672	-	AB209673 TSC_hg19_v1_chr3_-_15140645	-19687	-	TSC_hg19_v1_chr3_+_15247736 NM_014296	87413	+	TSC_hg19_v1_chr3_+_15247768 AB028639 BC056202 AK314253 CU691130	87633	+	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	213620	-	AK291288|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AK301735|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AL833545|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_022340|ZFYVE20|64145|zinc finger, FYVE domain containing 20##BC032628|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AB209673|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_014296|CAPN7|23473|calpain 7##AB028639|CAPN7|23473|calpain 7##BC056202|CAPN7|23473|calpain 7##AK314253|CAPN7|23473|calpain 7##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	0.999292	CTCF.p2:-5:0.999
chr13	22053209	22053320	reg1011785.p1	9.842	+	TSC_hg19_v1_chr13_-_22033510 BC067898 NM_153251 BC034944	-19757	-	TSC_hg19_v1_chr13_-_22033486 AX721051	-19782	-	CU686599 TSC_hg19_v1_chr13_-_22033417 BC110517 AK295804 BC050367 AK299354	-19874	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	125045	-	TSC_hg19_v1_chr13_-_22178356 NM_152726	125096	-	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	191884	+	BC067898|ZDHHC20|253832|zinc finger, DHHC-type containing 20##NM_153251|ZDHHC20|253832|zinc finger, DHHC-type containing 20##BC034944|ZDHHC20|253832|zinc finger, DHHC-type containing 20##BC110517|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK295804|ZDHHC20|253832|zinc finger, DHHC-type containing 20##BC050367|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK299354|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)	0.990434	CTCF.p2:-5:0.990
chr16	83249109	83249231	reg1014244.p1	9.841	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-588501	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	-588581	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	-588776	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	592430	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	592486	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	683599	+	AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase	0.978581	CTCF.p2:24:0.965
chr3	35701439	35701559	reg1011877.p1	9.840	+	BC051828 NM_016300	-17651	+	TSC_hg19_v1_chr3_+_35681016 BC041385 AK057559	-20398	+	TSC_hg19_v1_chr3_+_33840125 AF250394 GQ131806 AB384596 CU676494 CU686637 BT007367	-1861328	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	19697	+	BC017805 NM_198399 BC066651 BC036548	20960	+	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	720553	+	BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC041385|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK057559|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF250394|PDCD6IP|10015|programmed cell death 6 interacting protein##GQ131806|PDCD6IP|10015|programmed cell death 6 interacting protein##BT007367|PDCD6IP|10015|programmed cell death 6 interacting protein##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC017805|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_198399|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC066651|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC036548|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain	0.9653	CTCF.p2:-6:0.965
chr7	116625010	116625156	reg1015156.p1	9.840	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	-31510	+	TSC_hg19_v1_chr7_+_116593397 BC075855 NM_018412 NM_021908 AF234882 AF234883	-31698	+	TSC_hg19_v1_chr7_+_116502640 BC005338 AK293405 AK294409 AK315915 AK222989 AK223004 U03269 BC015963 BT006735 CU675123 U03851	-122451	+	TSC_hg19_v1_chr7_+_116660271 AK093212	35184	+	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	35282	+	BC078170 AK056742 NM_003391 X07876	338252	-	AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##BC075855|ST7|7982|suppression of tumorigenicity 7##NM_018412|ST7|7982|suppression of tumorigenicity 7##NM_021908|ST7|7982|suppression of tumorigenicity 7##AF234882|ST7|7982|suppression of tumorigenicity 7##AF234883|ST7|7982|suppression of tumorigenicity 7##BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK093212|ST7|7982|suppression of tumorigenicity 7##AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2	0.872963	CTCF.p2:-12:0.873
chr1	157141856	157141992	reg1011236.p1	9.839	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-33641	-	TSC_hg19_v1_chr1_-_157108158 L16464	-33774	-	AK131392 NM_001004341	-72325	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	380306	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	425877	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	528603	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.270007	CTCF.p2:-5:0.270
chr12	54378751	54378851	reg1011684.p1	9.839	+	NM_014212 AK291946 BC001543 AJ000041 CU674756	-11834	+	TSC_hg19_v1_chr12_+_54348683 AB464579 NM_173860	-30103	+	AF255676 NM_017410 BC090850 AF263466 BC002754 BT009908	-46169	+	AK313759 NM_017409 BC001293 AB464578 AF255675 BT009921	185	+	NM_006897 BC053894 AK315194 AK000445 AB464582 CU691056 BC032769	15124	+	TSC_hg19_v1_chr12_+_54402796 BC053898 NM_022658 AK290959	24045	+	NM_014212|HOXC11|3227|homeobox C11##AK291946|HOXC11|3227|homeobox C11##BC001543|HOXC11|3227|homeobox C11##AJ000041|HOXC11|3227|homeobox C11##NM_173860|HOXC12|3228|homeobox C12##AF255676|HOXC13|3229|homeobox C13##NM_017410|HOXC13|3229|homeobox C13##BC090850|HOXC13|3229|homeobox C13##AF263466|HOXC13|3229|homeobox C13##BC002754|HOXC13|3229|homeobox C13##BT009908|HOXC13|3229|homeobox C13##AK313759|HOXC10|3226|homeobox C10##NM_017409|HOXC10|3226|homeobox C10##BC001293|HOXC10|3226|homeobox C10##AF255675|HOXC10|3226|homeobox C10##BT009921|HOXC10|3226|homeobox C10##NM_006897|HOXC9|3225|homeobox C9##BC053894|HOXC9|3225|homeobox C9##AK315194|HOXC9|3225|homeobox C9##AK000445|HOXC9|3225|homeobox C9##BC032769|HOXC9|3225|homeobox C9##BC053898|HOXC8|3224|homeobox C8##NM_022658|HOXC8|3224|homeobox C8##AK290959|HOXC8|3224|homeobox C8	0.174212	
chr12	21099808	21099936	reg1015634.p1	9.838	+	BC058006 BC105597 NM_019844 BC022843 AK055874 BC070264	-136224	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	-251377	+	AK308317 NM_001244683	-375075	+	AF401642 NM_001009562	68757	+	BC020696 NM_006446 BC070172 AB026257 BC114376 BC054878 BC105596 AK312970	184264	+	NM_021094 AK296044	387960	-	BC058006|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC105597|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_019844|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC022843|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##AK055874|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC070264|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AF401642|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)##NM_001009562|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)##BC020696|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##NM_006446|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC070172|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AB026257|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC114376|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC054878|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC105596|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AK312970|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##NM_021094|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2##AK296044|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2	0.942172	CTCF.p2:-2:0.942
chr2	136671458	136671588	reg1010418.p1	9.838	+	AK299236 TSC_hg19_v1_chr2_-_136634035 NM_005915 AK303455	-37492	-	CU689360 BC020268 BC032374 TSC_hg19_v1_chr2_-_136633997 U46838 AK312575 BC008774 D84557	-37558	-	NM_002299 X07994	-76774	-	BT006710 CU674308 DQ890741 DQ893912 TSC_hg19_v1_chr2_-_136743053 CR749809 BC107749 AY762100	71532	-	TSC_hg19_v1_chr2_-_136743143 AK222476 BC000629 AK290607 J05032	71606	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	71693	-	AK299236|MCM6|4175|minichromosome maintenance complex component 6##NM_005915|MCM6|4175|minichromosome maintenance complex component 6##AK303455|MCM6|4175|minichromosome maintenance complex component 6##BC020268|MCM6|4175|minichromosome maintenance complex component 6##BC032374|MCM6|4175|minichromosome maintenance complex component 6##U46838|MCM6|4175|minichromosome maintenance complex component 6##AK312575|MCM6|4175|minichromosome maintenance complex component 6##BC008774|MCM6|4175|minichromosome maintenance complex component 6##D84557|MCM6|4175|minichromosome maintenance complex component 6##NM_002299|LCT|3938|lactase##X07994|LCT|3938|lactase##BT006710|DARS|1615|aspartyl-tRNA synthetase##DQ890741|DARS|1615|aspartyl-tRNA synthetase##DQ893912|DARS|1615|aspartyl-tRNA synthetase##CR749809|DARS|1615|aspartyl-tRNA synthetase##BC107749|DARS|1615|aspartyl-tRNA synthetase##AY762100|DARS|1615|aspartyl-tRNA synthetase##AK222476|DARS|1615|aspartyl-tRNA synthetase##BC000629|DARS|1615|aspartyl-tRNA synthetase##AK290607|DARS|1615|aspartyl-tRNA synthetase##J05032|DARS|1615|aspartyl-tRNA synthetase##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase	0.264322	CTCF.p2:-3:0.264
chr6	132231220	132231340	reg1012809.p1	9.838	+	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-102019	+	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	-102119	+	NM_001145659	-199124	-	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	41134	-	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	491336	-	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	602970	-	BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_001145659|CTAGE9|643854|CTAGE family, member 9##BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7	0.83333	CTCF.p2:10:0.833
chr3	123421049	123421191	reg1013618.p1	9.837	+	TSC_hg19_v1_chr3_-_123411207 AK300610	-9903	-	TSC_hg19_v1_chr3_-_123339426 NM_053031 NM_053032	-81644	-	BC113458 BC113456 BC100761 BC100762 BC100763 AF096773 AF096774 AF096775 AK314412 TSC_hg19_v1_chr3_-_123339352 BC017811 BC107783 Y09530 BC064420 AK314443	-81836	-	TSC_hg19_v1_chr3_-_123603158 BC064695 NM_053025 NM_053026 NM_053027 NM_053028	182051	-	TSC_hg19_v1_chr3_-_123680077 AK123060 AK307847 AK294979 BC040285	258966	-	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	259135	-	AK300610|MYLK|4638|myosin light chain kinase##NM_053031|MYLK|4638|myosin light chain kinase##NM_053032|MYLK|4638|myosin light chain kinase##BC113458|MYLK|4638|myosin light chain kinase##BC113456|MYLK|4638|myosin light chain kinase##BC100761|MYLK|4638|myosin light chain kinase##BC100762|MYLK|4638|myosin light chain kinase##BC100763|MYLK|4638|myosin light chain kinase##AF096773|MYLK|4638|myosin light chain kinase##AF096774|MYLK|4638|myosin light chain kinase##AF096775|MYLK|4638|myosin light chain kinase##AK314412|MYLK|4638|myosin light chain kinase##BC017811|MYLK|4638|myosin light chain kinase##BC107783|MYLK|4638|myosin light chain kinase##Y09530|MYLK|4638|myosin light chain kinase##BC064420|MYLK|4638|myosin light chain kinase##AK314443|MYLK|4638|myosin light chain kinase##BC064695|MYLK|4638|myosin light chain kinase##NM_053025|MYLK|4638|myosin light chain kinase##NM_053026|MYLK|4638|myosin light chain kinase##NM_053027|MYLK|4638|myosin light chain kinase##NM_053028|MYLK|4638|myosin light chain kinase##AK123060|CCDC14|64770|coiled-coil domain containing 14##AK307847|CCDC14|64770|coiled-coil domain containing 14##AK294979|CCDC14|64770|coiled-coil domain containing 14##BC040285|CCDC14|64770|coiled-coil domain containing 14##AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14	0.998677	CTCF.p2:-13:0.999
chr6	116217847	116217957	reg1013309.p1	9.837	+	AF503292 NM_153612 BC093911 BC093913	-1833878	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-1925566	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	-1925630	-	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	163980	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	204107	+	AK097758 TSC_hg19_v1_chr6_-_116422450	204528	-	AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	0.655811	CTCF.p2:3:0.656
chr11	93276555	93276669	reg1009418.p1	9.836	+	AF197137 TSC_hg19_v1_chr11_-_93276558 BC031564 NM_020179	-77	-	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	-212769	+	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	-345527	-	TSC_hg19_v1_chr11_+_93394847 NM_033395 BC015989 BC017394	118222	+	AB051518 TSC_hg19_v1_chr11_+_93394877	118277	+	AF275800 TSC_hg19_v1_chr11_-_93474661 BC001972 AF086435 AK027016 NM_024116	197994	-	AF197137|C11orf75|56935|chromosome 11 open reading frame 75##BC031564|C11orf75|56935|chromosome 11 open reading frame 75##NM_020179|C11orf75|56935|chromosome 11 open reading frame 75##NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_033395|KIAA1731|85459|KIAA1731##BC015989|KIAA1731|85459|KIAA1731##BC017394|KIAA1731|85459|KIAA1731##AB051518|KIAA1731|85459|KIAA1731##AF275800|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##BC001972|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AF086435|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AK027016|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##NM_024116|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa	0.034245	
chr1	218512714	218512850	reg1012444.p1	9.836	+	AK290066 BC003668 TSC_hg19_v1_chr1_+_218458652 BC020641 AF151873	-54113	+	NM_016052 TSC_hg19_v1_chr1_+_218458635	-54150	+	AY963797 AK310291 AK098591 BC014608 NM_138796 TSC_hg19_v1_chr1_+_217804714 EU832110 EU832204	-708089	+	NM_001135599 NM_003238 TSC_hg19_v1_chr1_+_218518677 AB209842	5929	+	M19154 TSC_hg19_v1_chr1_+_218519634	6823	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	834376	+	AK290066|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC003668|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC020641|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AF151873|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##NM_016052|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AY963797|SPATA17|128153|spermatogenesis associated 17##AK310291|SPATA17|128153|spermatogenesis associated 17##AK098591|SPATA17|128153|spermatogenesis associated 17##BC014608|SPATA17|128153|spermatogenesis associated 17##NM_138796|SPATA17|128153|spermatogenesis associated 17##EU832110|SPATA17|128153|spermatogenesis associated 17##EU832204|SPATA17|128153|spermatogenesis associated 17##NM_001135599|TGFB2|7042|transforming growth factor, beta 2##NM_003238|TGFB2|7042|transforming growth factor, beta 2##AB209842|TGFB2|7042|transforming growth factor, beta 2##M19154|TGFB2|7042|transforming growth factor, beta 2##NM_138794|LYPLAL1|127018|lysophospholipase-like 1	0.594801	CTCF.p2:-3:0.595
chr1	48176262	48176368	reg1010017.p1	9.835	+	AF042832 NM_004474	-274627	+	AF275722 NM_012186	-294572	+	TSC_hg19_v1_chr1_+_47799646 AF259961	-376674	+	NM_001194986	286246	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	512077	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	761363	-	AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##NM_001194986|LOC388630|388630|UPF0632 protein A##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6	0.86294	CTCF.p2:30:0.863
chr17	77184182	77184289	reg1013230.p1	9.835	+	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-113205	+	AF329840 NM_198593 BC021553	-153713	+	TSC_hg19_v1_chr17_+_77020308 AK055541	-163925	+	NM_001082575	294327	-	AY230663 BC041453 NM_178543 AY358622	520654	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	567746	+	AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2	0.924884	CTCF.p2:0:0.925
chr5	95117011	95117192	reg1000204.p2	9.835	+	TSC_hg19_v1_chr5_+_95067531 CU691986 AB385392	-49565	+	TSC_hg19_v1_chr5_+_95067066 BC047884 NM_014899 BC020231 BC013169 BC041337 AB020685 AK290034	-50233	+	AY027526 AK292338 AK310260 BC047333 AK093225 AX747999 BC032832 NM_031952	-98415	-	AF162769 BT006689 CR450312 CR542165 DQ892497 DQ895709 CU679866 D21238 AF069668 BC106075 X76648 TSC_hg19_v1_chr5_-_95158431 AK311868 BC005304 BC010965	41299	-	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	41419	-	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	180397	-	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3##NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3##BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3##BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3##BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3##AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3##AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3##AY027526|SPATA9|83890|spermatogenesis associated 9##AK292338|SPATA9|83890|spermatogenesis associated 9##AK310260|SPATA9|83890|spermatogenesis associated 9##BC047333|SPATA9|83890|spermatogenesis associated 9##AK093225|SPATA9|83890|spermatogenesis associated 9##BC032832|SPATA9|83890|spermatogenesis associated 9##NM_031952|SPATA9|83890|spermatogenesis associated 9##AF162769|GLRX|2745|glutaredoxin (thioltransferase)##BT006689|GLRX|2745|glutaredoxin (thioltransferase)##CR450312|GLRX|2745|glutaredoxin (thioltransferase)##CR542165|GLRX|2745|glutaredoxin (thioltransferase)##DQ892497|GLRX|2745|glutaredoxin (thioltransferase)##DQ895709|GLRX|2745|glutaredoxin (thioltransferase)##D21238|GLRX|2745|glutaredoxin (thioltransferase)##AF069668|GLRX|2745|glutaredoxin (thioltransferase)##BC106075|GLRX|2745|glutaredoxin (thioltransferase)##X76648|GLRX|2745|glutaredoxin (thioltransferase)##AK311868|GLRX|2745|glutaredoxin (thioltransferase)##BC005304|GLRX|2745|glutaredoxin (thioltransferase)##BC010965|GLRX|2745|glutaredoxin (thioltransferase)##NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2	0.011464	
chr8	6673887	6674015	reg1011159.p2	9.835	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	-107768	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	-108011	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	-108060	+	AY534243 AY358489 AY534242 NM_207411	19141	-	BC033298 BC047677 X92744 U73945 NM_005218	61532	-	M98331 BC093951 BC093953 BC069667 BC069710 BC069728 BC069769 NM_001926	109634	-	AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AY534243|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY358489|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY534242|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##NM_207411|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##BC033298|DEFB1|1672|defensin, beta 1##BC047677|DEFB1|1672|defensin, beta 1##X92744|DEFB1|1672|defensin, beta 1##U73945|DEFB1|1672|defensin, beta 1##NM_005218|DEFB1|1672|defensin, beta 1##M98331|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093951|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093953|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069667|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069710|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069728|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069769|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##NM_001926|DEFA6|1671|defensin, alpha 6, Paneth cell-specific	0.999748	CTCF.p2:-20:1.000
chr1	47658681	47658791	reg1011075.p1	9.833	+	TSC_hg19_v1_chr1_-_47655728 NM_005764	-2990	-	CR450304 CU680280 BC012303 TSC_hg19_v1_chr1_-_47655693	-3088	-	TSC_hg19_v1_chr1_+_47603114 BC148248 AY280371 NM_001010969 BC142690 BC142607 AY280372	-55614	+	M61108 NM_003189	36706	-	TSC_hg19_v1_chr1_-_47779820 DQ358744 AK307519 BC053615 CR749851 M74558 NM_001048166 NM_003035	121049	-	TSC_hg19_v1_chr1_+_47799474 NM_001136140 NM_016308	140729	+	NM_005764|PDZK1IP1|10158|PDZK1 interacting protein 1##CR450304|PDZK1IP1|10158|PDZK1 interacting protein 1##BC012303|PDZK1IP1|10158|PDZK1 interacting protein 1##BC148248|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280371|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##NM_001010969|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142690|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142607|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280372|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1##NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1##AK307519|STIL|6491|SCL/TAL1 interrupting locus##BC053615|STIL|6491|SCL/TAL1 interrupting locus##CR749851|STIL|6491|SCL/TAL1 interrupting locus##M74558|STIL|6491|SCL/TAL1 interrupting locus##NM_001048166|STIL|6491|SCL/TAL1 interrupting locus##NM_003035|STIL|6491|SCL/TAL1 interrupting locus##NM_001136140|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##NM_016308|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	0.999638	CTCF.p2:8:1.000
chr2	216784981	216785080	reg1009941.p1	9.833	+	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-484248	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-484510	-	AF312399 TSC_hg19_v1_chr2_-_216290008	-495058	-	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	93306	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	161514	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	161662	+	BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##AF312399|FN1|2335|fibronectin 1##AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169	0.974397	CTCF.p2:22:0.974
chr2	7812311	7812455	reg1012303.p1	9.833	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-754796	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-794520	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-805680	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1009820	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1165336	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1331438	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.997023	CTCF.p2:0:0.997
chr10	71476817	71476983	reg1014097.p1	9.832	+	NM_145306 BC013587	-86893	+	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	-143800	-	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	-265567	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	84757	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	84789	+	TSC_hg19_v1_chr10_+_71562275 M59217	85391	+	NM_145306|C10orf35|219738|chromosome 10 open reading frame 35##BC013587|C10orf35|219738|chromosome 10 open reading frame 35##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##M59217|COL13A1|1305|collagen, type XIII, alpha 1	0.996275	CTCF.p2:-1:0.996
chr10	11476483	11476600	reg1012424.p2	9.831	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-269049	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-269095	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-269116	+	NM_001080491	97732	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	177095	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	307857	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.954665	CTCF.p2:-5:0.955
chr15	90283423	90283553	reg1013673.p1	9.831	+	BC064626 NM_020212 AK304683 AK097525	-49445	+	BC101164 BC114384 AK297442 CR542046 CR542075 CU679445 DQ893368 DQ896686 DQ896687 DQ896688 EU176800 AK300978 BC009697 AF093668 AK313318 TSC_hg19_v1_chr15_-_90233984 AB015594 NM_003847 AK001415	-49558	-	TSC_hg19_v1_chr15_-_90222599 AB005293 BC031084 AK310907 NM_001145311 NM_002666	-60879	-	AL357571 TSC_hg19_v1_chr15_-_90294395 EU446875 NM_018670 BC006219	10961	-	BC111413 NM_001039958	36100	+	AK298134 TSC_hg19_v1_chr15_-_90347178	63687	-	BC064626|WDR93|56964|WD repeat domain 93##NM_020212|WDR93|56964|WD repeat domain 93##AK304683|WDR93|56964|WD repeat domain 93##AK097525|WDR93|56964|WD repeat domain 93##BC101164|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC114384|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK297442|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##CR542046|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##CR542075|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ893368|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896686|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896687|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896688|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##EU176800|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK300978|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC009697|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AF093668|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK313318|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AB015594|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##NM_003847|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK001415|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AB005293|PLIN1|5346|perilipin 1##BC031084|PLIN1|5346|perilipin 1##NM_001145311|PLIN1|5346|perilipin 1##NM_002666|PLIN1|5346|perilipin 1##AL357571|MESP1|55897|mesoderm posterior 1 homolog (mouse)##EU446875|MESP1|55897|mesoderm posterior 1 homolog (mouse)##NM_018670|MESP1|55897|mesoderm posterior 1 homolog (mouse)##BC006219|MESP1|55897|mesoderm posterior 1 homolog (mouse)##BC111413|MESP2|145873|mesoderm posterior 2 homolog (mouse)##NM_001039958|MESP2|145873|mesoderm posterior 2 homolog (mouse)##AK298134|ANPEP|290|alanyl (membrane) aminopeptidase	0.999774	CTCF.p2:-20:1.000
chr10	69426354	69426461	reg1012900.p1	9.830	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	-1011	-	NM_178011 BX640611 AY358315 BC111492	-740592	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-4145166	+	AF091606 AK313882 NM_013266	29530	-	CR457184 AF176013 BC017018 AK289537 AF176012 NM_021800 NM_201262	171445	-	TSC_hg19_v1_chr10_+_69644413 AF083106 NM_012238 AF235040	218000	+	AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##CR457184|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176013|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##BC017018|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AK289537|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176012|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_021800|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_201262|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF083106|SIRT1|23411|sirtuin 1##NM_012238|SIRT1|23411|sirtuin 1##AF235040|SIRT1|23411|sirtuin 1	0.973852	CTCF.p2:-18:0.974
chr1	23961549	23961679	reg1010256.p1	9.830	+	NM_002167 X69111	-75330	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	-75630	-	L22846 NM_004091	-103903	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	56666	+	TSC_hg19_v1_chr1_+_24018295 BC018970	56685	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	108290	+	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11##BC018970|RPL11|6135|ribosomal protein L11##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)	0.0	
chr12	57657683	57657808	reg1011918.p2	9.830	+	AK300688 BC008069 AK057013 AK311513 NM_145064	-12809	-	TSC_hg19_v1_chr12_-_57642922 CU675915	-14765	-	BC011910 NM_020142 AK094275	-23245	-	TSC_hg19_v1_chr12_-_57674254 X85326	16532	-	AB384552 TSC_hg19_v1_chr12_-_57693218	35437	-	NM_014925	46500	-	AK300688|STAC3|246329|SH3 and cysteine rich domain 3##BC008069|STAC3|246329|SH3 and cysteine rich domain 3##AK057013|STAC3|246329|SH3 and cysteine rich domain 3##AK311513|STAC3|246329|SH3 and cysteine rich domain 3##NM_145064|STAC3|246329|SH3 and cysteine rich domain 3##BC011910|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##NM_020142|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AK094275|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##NM_014925|R3HDM2|22864|R3H domain containing 2	0.997322	CTCF.p2:-21:0.997
chr6	14711416	14711543	reg1011997.p1	9.830	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-593457	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-593574	+	NM_001251901	-593993	+	TSC_hg19_v1_chr6_+_15245702 AK302624	534238	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	534933	+	BC033996 TSC_hg19_v1_chr6_-_15248900	537422	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.75948	CTCF.p2:-1:0.759
chr9	94489658	94489801	reg1013486.p1	9.830	+	TSC_hg19_v1_chr9_-_94186159 NM_005384	-303547	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	-303685	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	-365530	-	TSC_hg19_v1_chr9_-_94711095 BC033697	221399	-	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	222660	-	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	387935	-	NM_005384|NFIL3|4783|nuclear factor, interleukin 3 regulated##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1	0.105582	
chr13	61984959	61985070	reg1012361.p2	9.829	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-1013535	+	BX537910 NM_001146071 NM_030794	-1014424	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-1246913	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	4239	-	AK289924 NM_022843	4640	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	5819490	-	EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9	0.987881	CTCF.p2:10:0.988
chr14	25074729	25074856	reg1013629.p1	9.829	+	AB590242 CR456807 CR541704 DQ893067 DQ896320 M16117 TSC_hg19_v1_chr14_-_25045457 AK225914 BC014460 NM_001911	-29346	-	DQ082727 DQ082729 AB451464 AB590823 CU686784 M69136 BC069110 BC069370 BC069490 BC103974 BC103975 NM_001836	-97347	-	AK056368 TSC_hg19_v1_chr14_+_24912196	-162604	+	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	4069	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	28626	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	444446	-	CR456807|CTSG|1511|cathepsin G##CR541704|CTSG|1511|cathepsin G##DQ893067|CTSG|1511|cathepsin G##DQ896320|CTSG|1511|cathepsin G##M16117|CTSG|1511|cathepsin G##AK225914|CTSG|1511|cathepsin G##BC014460|CTSG|1511|cathepsin G##NM_001911|CTSG|1511|cathepsin G##DQ082727|CMA1|1215|chymase 1, mast cell##DQ082729|CMA1|1215|chymase 1, mast cell##AB451464|CMA1|1215|chymase 1, mast cell##M69136|CMA1|1215|chymase 1, mast cell##BC069110|CMA1|1215|chymase 1, mast cell##BC069370|CMA1|1215|chymase 1, mast cell##BC069490|CMA1|1215|chymase 1, mast cell##BC103974|CMA1|1215|chymase 1, mast cell##BC103975|CMA1|1215|chymase 1, mast cell##NM_001836|CMA1|1215|chymase 1, mast cell##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)	0.349769	CTCF.p2:-40:0.321
chr22	23096173	23096276	reg1011736.p1	9.829	+	TSC_hg19_v1_chr22_+_23063107 M18645 X53070 BC073786 X57805 X57813 AF026926 L35916 L35917 L35918 L35920 U43769 X64165 X64166 X54442	-33093	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	-41342	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	-55706	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	38882	+	TSC_hg19_v1_chr22_+_23154240 L29158 L29159 L29160 L29161 L29164 BC032452 BC089414 AY190827 X57810 L26902	58051	+	X62125 TSC_hg19_v1_chr22_+_23165276 AK129603 BC071804 BC033102 CU689610 L03633 HM996064 HM996172 AF124174 AF194540 AF194541 AF194542 AF194543 AF194544 AF194545 AF194546 AF194547 AF194548 AF194549 AF194550 AF194551 AF194552 AF194553 AF194554 AF194555 AF194556 AF194557 AF194558 AF194559 AF194560 AF194561 AF194562 AF194563 AF194564 AF194565 AF194566 AF194567 AF194568 AF194569 AF194570 AF194571 AF194572 AF194573 AF194574 AF194575 AF194576 AF194577 AJ388658 AJ697911 AM181371 AM183998 AM184000 AM184018 AY685383 AY942038 DQ098709 DQ098711 DQ098766 DQ098772 DQ098775 DQ098778 DQ098782 DQ322816 DQ322984 DQ322992 EF589387 EF589498 EF589544 GU086862 L26532 Y09387 AM184068 DQ098712 DQ098779 AJ399866 AY050712 DQ322899 DQ322900 DQ322979 L21956 S67988 AY950800 U09888 U09892 Y08149 AF103683 AF044486 AY962389 AF092503 AJ408283 DQ098753 Z46858 DQ098738 DQ098739 DQ098762 L38428 DQ098710 AF103704 AF103701 AF103718 AF490954 AF490947 AF103709 AF103640 AF103644 AF103645 AF103647 AF103697 AF103698 AF103700 U87151	69171	+	L35918|IGLJ3|28831|immunoglobulin lambda joining 3##BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3##DQ896079|IGL@|3535|immunoglobulin lambda locus	0.99779	CTCF.p2:-3:0.998
chr6	167364972	167365102	reg1011120.p2	9.829	+	TSC_hg19_v1_chr6_-_167276000 AK095751	-89029	-	AB384854 NM_001006932 AB209116	-89309	-	TSC_hg19_v1_chr6_-_167040713 BC002363 NM_021135	-324319	-	DQ884402 TSC_hg19_v1_chr6_-_167369732	4665	-	TSC_hg19_v1_chr6_-_167370030 BC001660 BC001819 BC039713 BC051912 AJ419865 AJ419866 AJ419867 U85625	4973	-	AK315467 TSC_hg19_v1_chr6_-_167370038 BC036282 NM_003730	5020	-	AK095751|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##BC001660|RNASET2|8635|ribonuclease T2##BC001819|RNASET2|8635|ribonuclease T2##BC039713|RNASET2|8635|ribonuclease T2##BC051912|RNASET2|8635|ribonuclease T2##AJ419865|RNASET2|8635|ribonuclease T2##AJ419866|RNASET2|8635|ribonuclease T2##AJ419867|RNASET2|8635|ribonuclease T2##U85625|RNASET2|8635|ribonuclease T2##AK315467|RNASET2|8635|ribonuclease T2##BC036282|RNASET2|8635|ribonuclease T2##NM_003730|RNASET2|8635|ribonuclease T2	0.712393	CTCF.p2:5:0.712
chr10	91149147	91149262	reg1011221.p2	9.828	+	BX647300 NM_001010987 BC150189 BC137368 BC137369	-11377	+	BC040833 AK091558 TSC_hg19_v1_chr10_-_91102477	-46749	-	NM_001031683 AK297137 AF026939 BC001383 BC004977	-56921	+	NM_001548 BC007091 AK314588 AK308688 X03557	3159	+	TSC_hg19_v1_chr10_+_91174324 NM_012420 BC025786	25139	+	U34605 TSC_hg19_v1_chr10_+_91174502 AK312358 AK293346	25284	+	BX647300|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##NM_001010987|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC150189|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC137368|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC137369|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##AK091558|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##NM_001548|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##BC007091|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK314588|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK308688|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##X03557|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##NM_012420|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##BC025786|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##U34605|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK312358|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK293346|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	0.485041	CTCF.p2:12:0.485
chr3	14967289	14967406	reg1010049.p1	9.828	+	NM_152536	-106879	+	NM_001184957 NM_001184958 NM_032137 AK131481 BC030599 AL834386 AL136781 BC038406	-250702	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	-274064	+	TSC_hg19_v1_chr3_-_14988966 BC014104 BC063441 BC039246	21609	-	TSC_hg19_v1_chr3_-_14989000 AK055924	21690	-	TSC_hg19_v1_chr3_+_14989089 AK290590 L27586 NM_003298	21808	+	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5##NM_001184957|C3orf20|84077|chromosome 3 open reading frame 20##NM_001184958|C3orf20|84077|chromosome 3 open reading frame 20##NM_032137|C3orf20|84077|chromosome 3 open reading frame 20##AK131481|C3orf20|84077|chromosome 3 open reading frame 20##BC030599|C3orf20|84077|chromosome 3 open reading frame 20##AL834386|C3orf20|84077|chromosome 3 open reading frame 20##AL136781|C3orf20|84077|chromosome 3 open reading frame 20##BC038406|C3orf20|84077|chromosome 3 open reading frame 20##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19##BC014104|LOC100505641|100505641|uncharacterized LOC100505641##BC063441|LOC100505641|100505641|uncharacterized LOC100505641##BC039246|LOC100505641|100505641|uncharacterized LOC100505641##AK055924|LOC100505641|100505641|uncharacterized LOC100505641##AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2##L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2##NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	0.998061	CTCF.p2:-5:0.998
chr14	61124028	61124178	reg1014148.p1	9.827	+	BT007083 CU679159 TSC_hg19_v1_chr14_-_61116196 BC008874 NM_005982 X91868	-8013	-	BC065831 NM_007374 BC087852 BC069413 AJ011785 EU446644	-148077	+	BC125070 BC125071 AK098187 NM_174978 AL832219	-171330	-	AF032107 TSC_hg19_v1_chr14_-_61190584 BC098135 BC098282 BC099722 BC101934 EU446619 EU446844 NM_017420	66551	-	TSC_hg19_v1_chr14_-_61191035 AK309358	66954	-	TSC_hg19_v1_chr14_+_61201489 NM_001177963 NM_002431 BC000820 AK308701 U61835 X87843 X92669 AB463879 CU674412 CR450336	77412	+	BT007083|SIX1|6495|SIX homeobox 1##BC008874|SIX1|6495|SIX homeobox 1##NM_005982|SIX1|6495|SIX homeobox 1##X91868|SIX1|6495|SIX homeobox 1##BC065831|SIX6|4990|SIX homeobox 6##NM_007374|SIX6|4990|SIX homeobox 6##BC087852|SIX6|4990|SIX homeobox 6##BC069413|SIX6|4990|SIX homeobox 6##AJ011785|SIX6|4990|SIX homeobox 6##EU446644|SIX6|4990|SIX homeobox 6##BC125070|C14orf39|317761|chromosome 14 open reading frame 39##BC125071|C14orf39|317761|chromosome 14 open reading frame 39##AK098187|C14orf39|317761|chromosome 14 open reading frame 39##NM_174978|C14orf39|317761|chromosome 14 open reading frame 39##AL832219|C14orf39|317761|chromosome 14 open reading frame 39##AF032107|SIX4|51804|SIX homeobox 4##BC098135|SIX4|51804|SIX homeobox 4##BC098282|SIX4|51804|SIX homeobox 4##BC099722|SIX4|51804|SIX homeobox 4##BC101934|SIX4|51804|SIX homeobox 4##EU446619|SIX4|51804|SIX homeobox 4##EU446844|SIX4|51804|SIX homeobox 4##NM_017420|SIX4|51804|SIX homeobox 4##AK309358|SIX4|51804|SIX homeobox 4##NM_001177963|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##NM_002431|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##BC000820|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##AK308701|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##U61835|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##X87843|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##X92669|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##CR450336|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)	0.0	
chr4	158125831	158125928	reg1013730.p1	9.827	+	TSC_hg19_v1_chr4_+_157997314 NM_000824 NM_001166061 AF094754 BC032635 AK290617 BC022502 U33267 NM_001166060 AF094755	-128445	+	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	-233320	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	-233401	-	NM_000826 NM_001083619 NM_001083620 BC028736 AL832605 TSC_hg19_v1_chr4_+_158141879 AB209567 BC010574 L20814	16005	+	AK096792 AK129723 TSC_hg19_v1_chr4_+_159091940	966054	+	AL834177 AB527363 AM392540 AM392704 TSC_hg19_v1_chr4_-_159092534	966642	-	NM_000824|GLRB|2743|glycine receptor, beta##NM_001166061|GLRB|2743|glycine receptor, beta##AF094754|GLRB|2743|glycine receptor, beta##BC032635|GLRB|2743|glycine receptor, beta##AK290617|GLRB|2743|glycine receptor, beta##BC022502|GLRB|2743|glycine receptor, beta##U33267|GLRB|2743|glycine receptor, beta##NM_001166060|GLRB|2743|glycine receptor, beta##AF094755|GLRB|2743|glycine receptor, beta##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C##NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AK096792|LOC285505|285505|uncharacterized LOC285505##AK129723|LOC285505|285505|uncharacterized LOC285505##AL834177|FAM198B|51313|family with sequence similarity 198, member B##AM392540|FAM198B|51313|family with sequence similarity 198, member B##AM392704|FAM198B|51313|family with sequence similarity 198, member B	0.972304	CTCF.p2:13:0.972
chr11	56884197	56884323	reg1013722.p1	9.826	+	BC137198 NM_001005323	-127893	+	NM_001005284	-372974	-	AB463984 NM_001005213 NM_001013358	-416399	+	AK127591 NM_001005210 BC136737 BC136739 BC150572	65039	+	AK075252 BC032688 AK315542 AK074514 X89271 NM_005161	120540	-	AF441771 TSC_hg19_v1_chr11_-_57089790	205486	-	BC137198|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##NM_001005323|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##NM_001005284|OR9G4|283189|olfactory receptor, family 9, subfamily G, member 4##NM_001005213|OR9G1|390174|olfactory receptor, family 9, subfamily G, member 1##NM_001013358|OR9G9|504191|olfactory receptor, family 9, subfamily G, member 9##AK127591|LRRC55|219527|leucine rich repeat containing 55##NM_001005210|LRRC55|219527|leucine rich repeat containing 55##BC136737|LRRC55|219527|leucine rich repeat containing 55##BC136739|LRRC55|219527|leucine rich repeat containing 55##BC150572|LRRC55|219527|leucine rich repeat containing 55##AK075252|APLNR|187|apelin receptor##BC032688|APLNR|187|apelin receptor##AK315542|APLNR|187|apelin receptor##AK074514|APLNR|187|apelin receptor##X89271|APLNR|187|apelin receptor##NM_005161|APLNR|187|apelin receptor##AF441771|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa	0.831832	CTCF.p2:-6:0.832
chr8	110747604	110747763	reg1014361.p1	9.826	+	NM_001099743 NM_001099744	-43664	-	AK290469 NM_001099745 NM_001099746	-54450	-	AL713645 AB195676 AB195677 AB195678 NM_001099747 NM_001099748 NM_001099749 NM_001099750 NM_017786	-86614	-	BC028739 AK313469 AF167082 NM_014379 AK297393	239283	-	AB114605 NM_198124	3641698	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	3701446	-	NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AL713645|SYBU|55638|syntabulin (syntaxin-interacting)##AB195676|SYBU|55638|syntabulin (syntaxin-interacting)##AB195677|SYBU|55638|syntabulin (syntaxin-interacting)##AB195678|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)##NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3	0.997321	CTCF.p2:-14:0.997
chrX	77285287	77285415	reg1013835.p1	9.826	+	NM_001029891 AB528771	-60215	-	AB117973 TSC_hg19_v1_chrX_+_77166237 AK096667 AB208828	-119109	+	TSC_hg19_v1_chrX_+_77166193 AK310748 NM_000052 L06133	-119158	+	NM_000291 TSC_hg19_v1_chrX_+_77359707	74336	+	TSC_hg19_v1_chrX_+_77359742 AK301632 AK303848 AK291081 AK295014 AK295182 AK298855 AK310756 AK312280 BC103752 D28371	74380	+	TSC_hg19_v1_chrX_+_77359756 V00572	74405	+	NM_001029891|PGAM4|441531|phosphoglycerate mutase family member 4##AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##NM_000291|PGK1|5230|phosphoglycerate kinase 1##AK301632|PGK1|5230|phosphoglycerate kinase 1##AK303848|PGK1|5230|phosphoglycerate kinase 1##AK291081|PGK1|5230|phosphoglycerate kinase 1##AK295014|PGK1|5230|phosphoglycerate kinase 1##AK295182|PGK1|5230|phosphoglycerate kinase 1##AK298855|PGK1|5230|phosphoglycerate kinase 1##AK310756|PGK1|5230|phosphoglycerate kinase 1##AK312280|PGK1|5230|phosphoglycerate kinase 1##BC103752|PGK1|5230|phosphoglycerate kinase 1##D28371|PGK1|5230|phosphoglycerate kinase 1##V00572|PGK1|5230|phosphoglycerate kinase 1	0.20381	CTCF.p2:9:0.204
chr3	61516157	61516274	reg1012442.p1	9.825	+	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	-279125	-	BC050317 TSC_hg19_v1_chr3_-_59035759	-2480455	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-2480474	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	30996	+	BC047734 TSC_hg19_v1_chr3_+_61547294	31071	+	L09247 AB385117 TSC_hg19_v1_chr3_+_61548071	31761	+	BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.82215	CTCF.p2:5:0.822
chr4	46846483	46846612	reg1012278.p2	9.825	+	AB209295 AK293466 S62907 TSC_hg19_v1_chr4_-_46391998 NM_000807	-454634	-	TSC_hg19_v1_chr4_-_46391484 AK307128	-455034	-	TSC_hg19_v1_chr4_-_46391400 AK125179 NM_001114175	-455148	-	BC107855 BC035923 AX721204 NM_130902	64690	-	CU690038 DQ891679 DQ894864 EU176605 U30461 NM_001204266 NM_001204267 BC035055	148949	-	AK090780 NM_000809	149876	-	AB209295|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK293466|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##S62907|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_000807|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK307128|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK125179|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_001114175|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##BC107855|COX7B2|170712|cytochrome c oxidase subunit VIIb2##BC035923|COX7B2|170712|cytochrome c oxidase subunit VIIb2##NM_130902|COX7B2|170712|cytochrome c oxidase subunit VIIb2##DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##AK090780|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_000809|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	0.878505	CTCF.p2:-18:0.879
chr6	133833689	133833809	reg1010550.p1	9.825	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	-271217	+	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	-271258	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	-698030	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	376505	+	TSC_hg19_v1_chr6_+_134210277 AF035718 AF047419 BC025697	376521	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	439615	+	BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)##AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21##AF035718|TCF21|6943|transcription factor 21##AF047419|TCF21|6943|transcription factor 21##BC025697|TCF21|6943|transcription factor 21##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1	0.997483	CTCF.p2:10:0.997
chr10	89610653	89610777	reg1011445.p1	9.824	+	TSC_hg19_v1_chr10_-_89577921 AK075223 NM_032810	-32813	-	TSC_hg19_v1_chr10_+_89419623 NM_001015880 NM_004670 BC009894 AK312556 AF091242 AF150754 AF074331 AF173365 DQ893625 DQ895430 AF313907	-191170	+	AK309176 NM_001178118	-343126	+	EU552092 NM_001126049	12478	-	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	12511	+	TSC_hg19_v1_chr10_+_89623380 BC005821	12674	+	AK075223|ATAD1|84896|ATPase family, AAA domain containing 1##NM_032810|ATAD1|84896|ATPase family, AAA domain containing 1##NM_001015880|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##NM_004670|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##BC009894|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK312556|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF091242|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF150754|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF074331|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF173365|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ893625|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ895430|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF313907|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK309176|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178118|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##EU552092|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_001126049|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog	0.968289	CTCF.p2:-3:0.968
chr15	73557997	73558126	reg1014105.p1	9.824	+	NM_001172623 NM_001172624 NM_002499 U61262 U72391 BC117161 BC143270 BC143271 BC143279 AB528479	-213141	+	TSC_hg19_v1_chr15_-_73076118 AK055526 NM_031284	-481938	-	BC044589 TSC_hg19_v1_chr15_-_73076072	-481990	-	TSC_hg19_v1_chr15_-_73661207 AJ132429 DQ854814	103146	-	AJ238850 NM_005477	103543	-	NM_001042367 AK131030 BC055412	177448	+	NM_001172623|NEO1|4756|neogenin 1##NM_001172624|NEO1|4756|neogenin 1##NM_002499|NEO1|4756|neogenin 1##U61262|NEO1|4756|neogenin 1##U72391|NEO1|4756|neogenin 1##BC117161|NEO1|4756|neogenin 1##BC143270|NEO1|4756|neogenin 1##BC143271|NEO1|4756|neogenin 1##BC143279|NEO1|4756|neogenin 1##AK055526|ADPGK|83440|ADP-dependent glucokinase##NM_031284|ADPGK|83440|ADP-dependent glucokinase##BC044589|ADPGK|83440|ADP-dependent glucokinase##AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60##AK131030|C15orf60|283677|chromosome 15 open reading frame 60##BC055412|C15orf60|283677|chromosome 15 open reading frame 60	0.999258	CTCF.p2:3:0.999
chr8	19266046	19266160	reg1008943.p1	9.824	+	TSC_hg19_v1_chr8_+_19171505 NM_001174160 NM_022071 AK024799 AK293301 BC082982 NM_001174159	-94820	+	TSC_hg19_v1_chr8_-_18871214 AK091317 AX746913 NM_015310	-394817	-	GU727648 TSC_hg19_v1_chr8_-_18871128	-394991	-	BX649103 NM_001130518	193927	-	AY358441 NM_018371	273990	-	AK314625 TSC_hg19_v1_chr8_-_19615422	349314	-	NM_001174160|SH2D4A|63898|SH2 domain containing 4A##NM_022071|SH2D4A|63898|SH2 domain containing 4A##AK024799|SH2D4A|63898|SH2 domain containing 4A##AK293301|SH2D4A|63898|SH2 domain containing 4A##BC082982|SH2D4A|63898|SH2 domain containing 4A##NM_001174159|SH2D4A|63898|SH2 domain containing 4A##AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3##GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX649103|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_001130518|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AY358441|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018371|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AK314625|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1	0.962309	CTCF.p2:-9:0.962
chr12	262432	262499	reg1017932.p2	9.823	+	AK091953 AX747275 NM_015232	-75924	+	TSC_hg19_v1_chr12_+_175945 BC024764 NM_001170738	-86505	+	None	None	None	NM_003044 BC036838 BC026339 NM_001122847	60272	-	AK307167 AK313690 NM_001122848 NM_001206931	60847	-	AK313511 AF462445 AK295904 AK296127 AK296209 BC020867 BC022392 NM_001190997 NM_001243392 NM_016615	109551	-	AK091953|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_015232|IQSEC3|440073|IQ motif and Sec7 domain 3##BC024764|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_001170738|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_003044|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC036838|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC026339|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001122847|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK307167|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK313690|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001122848|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001206931|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK313511|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AF462445|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK295904|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK296127|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK296209|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##BC020867|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##BC022392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_001190997|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_001243392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_016615|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	0.218633	CTCF.p2:14:0.219
chr20	19609341	19609438	reg1011307.p1	9.823	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	-415936	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	-416104	+	NM_001242671	-798551	-	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	257754	+	BC128065 NM_018993 TSC_hg19_v1_chr20_+_19870217 AB060339	260838	+	TSC_hg19_v1_chr20_+_19915762 BC034698 AL136924	306360	+	AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2##BC128065|RIN2|54453|Ras and Rab interactor 2##NM_018993|RIN2|54453|Ras and Rab interactor 2##AB060339|RIN2|54453|Ras and Rab interactor 2##BC034698|RIN2|54453|Ras and Rab interactor 2##AL136924|RIN2|54453|Ras and Rab interactor 2	0.952888	CTCF.p2:-4:0.953
chr3	160425350	160425481	reg1013589.p1	9.823	+	AK026248 NM_025047 BC034354	-30460	+	TSC_hg19_v1_chr3_-_160283387 BC034493 NM_002268	-142027	-	TSC_hg19_v1_chr3_-_160283329 BC028691 AK291041	-142095	-	TSC_hg19_v1_chr3_+_160473386 BC110801	47925	+	AY337264 NM_139245	48580	+	AB050856 NM_033169 TSC_hg19_v1_chr3_-_160823138 AY359049 BC047618 AK223439 BC028571 AF154848 AK022491 AK095917 NM_001038628 NM_003781 NM_033167 NM_033168	397522	-	AK026248|ARL14|80117|ADP-ribosylation factor-like 14##NM_025047|ARL14|80117|ADP-ribosylation factor-like 14##BC034354|ARL14|80117|ADP-ribosylation factor-like 14##BC034493|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##NM_002268|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##BC110801|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	0.98148	CTCF.p2:-14:0.981
chr8	142193693	142193805	reg1011094.p1	9.823	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-55012	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-182493	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-548125	-	AK128212 NM_001080431	44923	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	70441	-	NM_005293	183615	-	NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.057364	
chr11	71622838	71622949	reg1009521.p1	9.822	+	NM_001242853	-33395	+	AF529416 NM_001002035	-78648	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	-97987	-	NM_018320	16874	+	TSC_hg19_v1_chr11_+_71640092 AL833638 AK023139 AK094508 CR457298 BC009672 BC093084 BC117273	17218	+	TSC_hg19_v1_chr11_+_71709954 NM_001039659 NM_001039660 NM_173044 AF215907 BC044215 AF110801 NM_005699 NM_173042	87136	+	NM_001242853|LOC100129216|100129216|beta-defensin 131-like##AF529416|DEFB108B|245911|defensin, beta 108B##NM_001002035|DEFB108B|245911|defensin, beta 108B##BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene##NM_018320|RNF121|55298|ring finger protein 121##AL833638|RNF121|55298|ring finger protein 121##AK023139|RNF121|55298|ring finger protein 121##AK094508|RNF121|55298|ring finger protein 121##CR457298|RNF121|55298|ring finger protein 121##BC009672|RNF121|55298|ring finger protein 121##BC093084|RNF121|55298|ring finger protein 121##BC117273|RNF121|55298|ring finger protein 121##NM_001039659|IL18BP|10068|interleukin 18 binding protein##NM_001039660|IL18BP|10068|interleukin 18 binding protein##NM_173044|IL18BP|10068|interleukin 18 binding protein##AF215907|IL18BP|10068|interleukin 18 binding protein##BC044215|IL18BP|10068|interleukin 18 binding protein##AF110801|IL18BP|10068|interleukin 18 binding protein##NM_005699|IL18BP|10068|interleukin 18 binding protein##NM_173042|IL18BP|10068|interleukin 18 binding protein	1.631974	CTCF.p2:24:0.892	CTCF.p2:-78:0.740
chr15	70271714	70271814	reg1010475.p1	9.822	+	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-526543	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-564402	-	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	-565018	+	BC015421 TSC_hg19_v1_chr15_-_70341948	70145	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	118463	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	118479	-	NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.013468	
chr10	118927769	118927884	reg1012569.p1	9.821	+	AK127095 NM_001112704 NM_199131	-30015	-	NM_001127211 NM_018330 TSC_hg19_v1_chr10_-_118765131 AK091381 AX746947	-162714	-	TSC_hg19_v1_chr10_-_118764901 AK095703	-163002	-	AB087138 AB464053 NM_181840	29173	+	NM_003054 BC030593 TSC_hg19_v1_chr10_+_119000626 AK314997 L23205 L09118 X71354 L14269 BC108927 BC108928	72824	+	CU688476 TSC_hg19_v1_chr10_-_119134939 BC012186 BC028375 NM_173791 AK091746 AX747159 BC033019	207055	-	AK127095|VAX1|11023|ventral anterior homeobox 1##NM_001112704|VAX1|11023|ventral anterior homeobox 1##NM_199131|VAX1|11023|ventral anterior homeobox 1##NM_001127211|KIAA1598|57698|KIAA1598##NM_018330|KIAA1598|57698|KIAA1598##AK091381|KIAA1598|57698|KIAA1598##AK095703|KIAA1598|57698|KIAA1598##AB087138|KCNK18|338567|potassium channel, subfamily K, member 18##NM_181840|KCNK18|338567|potassium channel, subfamily K, member 18##NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC012186|PDZD8|118987|PDZ domain containing 8##BC028375|PDZD8|118987|PDZ domain containing 8##NM_173791|PDZD8|118987|PDZ domain containing 8##AK091746|PDZD8|118987|PDZ domain containing 8##BC033019|PDZD8|118987|PDZ domain containing 8	1.098263	CTCF.p2:9:0.996
chr11	28719603	28719731	reg1013776.p1	9.821	+	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-587814	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-589789	+	TSC_hg19_v1_chr11_-_28129704 BC026090 NM_031217	-589944	-	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	1318864	-	NM_000510 NM_001018080	1532895	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	1624985	+	BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##BC026090|KIF18A|81930|kinesin family member 18A##NM_031217|KIF18A|81930|kinesin family member 18A##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46	0.998841	CTCF.p2:-3:0.999
chr2	131320742	131320886	reg1014467.p1	9.821	+	NM_001079530 AK315326 AK290094 NM_032545 BC146897 BC110080 BC069508 BC074825 BC074826 AF312769	-41976	+	NM_001142370 NM_014369 TSC_hg19_v1_chr2_+_131113598 BC031076 BC024280 BC041562 BC052800 X79568 AK303804 CU690934	-207164	+	TSC_hg19_v1_chr2_+_131100487 BC010042 NM_033416	-220328	+	CU686866 AF312769 BC074825 BC074826 BC069508 BC110080 BC146897 NM_032545 AK290094 AK315326 NM_001079530	36240	-	BC105013 BC105041 NM_207364 AY569570 AY280965	165869	+	AK289525 NM_152698 AK095696 AK291424 BC113445 BC113447 BC143806 NM_001105193	192301	+	NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_001142370|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##NM_014369|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC031076|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC024280|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC041562|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC052800|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##X79568|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##AK303804|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC010042|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_033416|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##BC105013|GPR148|344561|G protein-coupled receptor 148##BC105041|GPR148|344561|G protein-coupled receptor 148##NM_207364|GPR148|344561|G protein-coupled receptor 148##AY569570|GPR148|344561|G protein-coupled receptor 148##AY280965|GPR148|344561|G protein-coupled receptor 148##AK289525|FAM123C|205147|family with sequence similarity 123C##NM_152698|FAM123C|205147|family with sequence similarity 123C##AK095696|FAM123C|205147|family with sequence similarity 123C##AK291424|FAM123C|205147|family with sequence similarity 123C##BC113445|FAM123C|205147|family with sequence similarity 123C##BC113447|FAM123C|205147|family with sequence similarity 123C##BC143806|FAM123C|205147|family with sequence similarity 123C##NM_001105193|FAM123C|205147|family with sequence similarity 123C	1.008664	CTCF.p2:20:0.996
chr3	185395126	185395256	reg1011753.p1	9.819	+	AK304402 TSC_hg19_v1_chr3_+_185304106 AF151697 NM_021627 AK296772 AK027599 AK296744 BC040609 CU691906 AB037752 AB385449 AL834380	-91108	+	CU687970 TSC_hg19_v1_chr3_-_185270374 AK298380 AY036912 AY093498 EF186228 EF186229 BC064941 AK122651 NM_139248	-124863	-	TSC_hg19_v1_chr3_-_185216824 EU831805 EU831882 AK313954 BC019884 BC008043 BX647928 AY358547 AK172748 AK290878 NM_080652	-178492	-	CU676908 DQ892161 EU176689 TSC_hg19_v1_chr3_-_185542803 AK309611 AF117107 BC012322	147583	-	TSC_hg19_v1_chr3_-_185542828 BC021290 AK290664 NM_001007225 NM_006548	147640	-	AK091863 TSC_hg19_v1_chr3_-_185641735	246474	-	AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK298380|LIPH|200879|lipase, member H##AY036912|LIPH|200879|lipase, member H##AY093498|LIPH|200879|lipase, member H##EF186228|LIPH|200879|lipase, member H##EF186229|LIPH|200879|lipase, member H##BC064941|LIPH|200879|lipase, member H##AK122651|LIPH|200879|lipase, member H##NM_139248|LIPH|200879|lipase, member H##EU831805|TMEM41A|90407|transmembrane protein 41A##EU831882|TMEM41A|90407|transmembrane protein 41A##AK313954|TMEM41A|90407|transmembrane protein 41A##BC019884|TMEM41A|90407|transmembrane protein 41A##BC008043|TMEM41A|90407|transmembrane protein 41A##BX647928|TMEM41A|90407|transmembrane protein 41A##AY358547|TMEM41A|90407|transmembrane protein 41A##AK172748|TMEM41A|90407|transmembrane protein 41A##AK290878|TMEM41A|90407|transmembrane protein 41A##NM_080652|TMEM41A|90407|transmembrane protein 41A##DQ892161|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##EU176689|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK309611|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AF117107|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##BC021290|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK290664|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##NM_001007225|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##NM_006548|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK091863|TRA2B|6434|transformer 2 beta homolog (Drosophila)	0.088349	
chr11	34534512	34534650	reg1014310.p1	9.818	+	AB528439 AK290817 AF115402 NM_001243081 NM_198381	-1350	-	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	-74032	+	TSC_hg19_v1_chr11_+_34460487 AK291585 NM_001752 BC110398 AK315350 X04076 BC112217 BC112219	-74107	+	AK075197 AK290808 TSC_hg19_v1_chr11_-_34535310 AK074633 AF115403 AF049703 BC029743 AK312537 NM_001243080 NM_001422 DQ123839	745	-	NM_001206615 NM_012153 TSC_hg19_v1_chr11_+_34642639	108032	+	TSC_hg19_v1_chr11_+_34642661 AF212848 AF203977 AF170583 AF124438 AF124439	108085	+	AK290817|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115402|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243081|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_198381|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase##AK291585|CAT|847|catalase##NM_001752|CAT|847|catalase##BC110398|CAT|847|catalase##AK315350|CAT|847|catalase##X04076|CAT|847|catalase##BC112217|CAT|847|catalase##BC112219|CAT|847|catalase##AK075197|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK290808|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK074633|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115403|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF049703|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##BC029743|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK312537|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243080|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001422|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##DQ123839|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001206615|EHF|26298|ets homologous factor##NM_012153|EHF|26298|ets homologous factor##AF212848|EHF|26298|ets homologous factor##AF203977|EHF|26298|ets homologous factor##AF170583|EHF|26298|ets homologous factor##AF124438|EHF|26298|ets homologous factor##AF124439|EHF|26298|ets homologous factor	0.947589	CTCF.p2:7:0.948
chr6	141242866	141242999	reg1013339.p1	9.818	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-1547148	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-1547171	-	NM_001168389 NM_001168388	-1547509	-	BC095542 GU727635 M73482 NM_002511	1166932	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	1225458	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	1225474	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.061422	
chr14	106554883	106555002	reg1012121.p2	9.817	+	AF028100 AF460781 AF460830 DQ523918 DQ454686 DQ454784 AY003751 GQ232926 GQ232842 DQ454536 DQ454572 DQ454577 DQ523874 GU552698 DQ100996 AY003834 AY003866 DQ454881 DQ454918 GQ232935 GU552747 AY003780 DQ454841 DQ523891 FJ694882 FJ839966 FJ839976 FJ839978 FJ839985 FJ839992 FJ840024 FJ840027 FJ840030 FJ840039 FJ840068 FJ840074 FJ840076 FJ840077 FJ840081 FJ840084 FJ840087 FJ840121 FJ840122 FJ840152 FJ840211 FJ840345 FJ840372 FJ840374 FJ840382 FJ840393 FJ873873 FJ873898 FJ873903 FJ873918 FJ873976 FJ873981 FJ874020 FJ874039 FJ874070 AJ008190 AY003813 AY003814 EF175404 EF091903 EF091904 EF175384 EU350416 EU350417 AF035027 EU099275 EU099133 AM183981 AM183982 AM183983 HQ704031 HM774241 L04343 U63211 AF103184 FJ385385 HM774328 HM774349 HM774514 HM774642 HM774682 HM774840 HM774998 HQ704030 HQ704032 HQ704033 HQ704034 AF032360 HM774930 S56184 L03385 Y15773 AJ306670 AY376085 DQ926534 HM994910 HM995374 HM995381 AB063655 AB063669 AB063676 AB063796 AB063804 AB063927 AB066885 AB066886 AB066890 AB066980 AB066983 AB067006 AB067010 AB067016 AB067028 AB067069 AB067083 AB067103 AB067234 AB067266 AB363180 AF174058 AF174062 AJ306669 AJ309318 AM279602 AY376074 AY376080 AY944687 DQ100830 DQ100852 DQ100869 DQ100889 DQ100935 DQ926042 DQ926211 DQ926238 DQ926293 DQ926337 DQ926445 DQ926545 DQ926589 DQ926594 DQ926641 EF177963 EF177965 EU117415 FJ385303 FJ385304 FJ385360 FJ490203 GU570287 GU570291 GU570293 GU570294 HM994902 HM994970 HM994971 HM994973 HM994974 HM994975 HM994976 HM994999 HM995000 HM995001 HM995002 HM995003 HM995005 HM995006 HM995007 HM995008 HM995009 HM995010 HM995011 HM995229 HM995234 HM995240 HM995300 HM995301 HM995302 HM995303 HM995305 HM995350 HM995352 HM995354 HM995372 HM995378 HM995379 HM995382 HM995383 HM995384 HM995385 HM995386 HM995423 HM995430 HM995431 HM995449 HM995453 HM995454 HM995455 HM995458 HM995459 HM995507 HM995509 HM995510 HM995511 HM995575 HM995632 HM995835 HM995836 HM995838 HM995839 HM995840 HM995841 HM995954 HM996284 HM996494 HQ378378 U07985 Z18834 X98899 AB021529 AB021539 AF035796 AF471223 AF471224 AF471226 AF471227 AF471231 AF471235 AF471238 AF471239 AJ239353 AJ245321 AJ579149 AJ579153 AJ579156 AJ579215 AJ579229 AJ617571 AY379733 AY941939 D83676 D83677 DQ225095 DQ535264 DQ535301 DQ535363 DQ535409 DQ535438 DQ535483 EF633755 EF633756 EF633757 EF633758 EF633787 EF633789 EF633790 EF633816 EU835550 EU835551 GU570285 GU570286 HM152494 U00488 U00506 U00546 U00577 U00588 X62968 X62969 X63080 X64239 X73605 X79166 X99360 Z18318 Z33899 Z33901 Z14176 Z14171 AY994080 EU883655 DQ234395 DQ234396 DQ234397 DQ234398 DQ234399 DQ234401 EU883644 EU883645 EU883646 EU883647 EU883648 EU883649 EU883650 EU883651 EU883652 EU883653 EU883654 EU883656 EU883657 EU883658 EU883659 L23565 X53613 Z80840 CU675389 CU676902 BC021276 BC006402 TSC_hg19_v1_chr14_-_106552810 AK097367 AK123546 AK128565 AK128625 AK129508 BX640627	-2381	-	U49659 U32203 U32487 U32607 U32954 U33784 AF028116 AF267845 AJ437672 AJ437673 AJ437676 AJ437677 AY155561 AY155552 AY155553 AY155554 AY155555 AY155556 AY155558 AY155559 AY155560 DQ454893 DQ454501 DQ454556 AY003840 DQ454563 DQ454673 DQ454929 DQ454579 DQ454828 DQ523913 DQ454847 AF017458 FJ873972 FJ873986 HM995044 AJ487486 FJ694876 GQ232843 AF209886 AJ007327 AF209893 HQ392873 AF343406 AM279474 AM279478 AM279560 AM279563 AF308547 AF308555 HM773982 HM775023 AY515010 JN110874 L04323 HM774154 HM774400 HM774451 HM774458 HM774741 HM774744 HM774802 HM774806 HM775008 HM775009 HM775022 DQ097897 EU099249 AB067193 HM995129 AM183997 AY393237 AY393510 AY393524 AY193810 AY392846 AY392882 AY393110 AY393131 AY393136 AY393222 AY393234 AY393247 AY393248 AY393260 AY393499 AY393502 AY393529 AY393530 AY393534 AY393607 AY393631 AY393634 HM996282 HM996256 DQ100826 AF062290 DQ100689 DQ523985 EU620053 GU570225 HM995043 HM995045 HM995046 HM995047 HM995049 HM995050 HM995122 HM995127 HM995128 HM995148 HM995149 HM995150 HM995151 HM995152 HM995153 HM995154 HM995155 HM995208 HM995254 HM995311 HM995312 HM995363 HM995366 HM995694 HM995695 HM995698 HM995700 HM995703 HM995706 HM995708 HM995973 HM995974 HM995975 HM995976 HM995980 HM995983 HM995988 HM995989 HM995993 HM996202 HM996204 HM996241 HM996510 AB066887 AB067030 AB067098 AB067233 AF115112 AF115117 AF174060 AJ306682 AY376094 AY515000 DQ926131 DQ926568 DQ926621 EF178040 FJ195456 FJ195503 Z92895 Z92896 AB063690 AB063704 AB063736 AB066827 AB066831 AB066838 AB067161 AB067182 AB067304 AB067306 AB067324 AB289325 AB289327 AF021988 AF115130 AJ617574 AY640556 AY781858 AY971028 AY971058 AY971094 DQ005271 DQ100828 DQ100854 DQ205183 DQ535305 DQ768422 DQ926187 DQ926367 DQ926378 DQ926488 FJ385322 GU570224 HM152497 JN158499 M26435 U00547 U00560 U00561 Z18321 Z97032 DQ926181 DQ535306 DQ535339 EF178019 EF178022 FJ195500 FJ195523 L26892 HM995872 HM995895 HM995898 HM995899 AF062115 AF062177 AF062190 AF062211 AF062222 AF062223 AF062261 AF062263 AY392866 U43760 X65919 Z47216 Z47238 Z47240 BC067091 AF283666 BC075846 BC037361 Z14165 Z14166 Z14167 TSC_hg19_v1_chr14_-_106539571 AK097906 AK301334	-15603	-	AY035373 AY885209 AY885216 X61021 DQ454578 DQ523921 AF460677 AF460684 AF460701 AF460706 AF460802 DQ454428 GQ232803 GQ232912 GQ232954 GU552749 GQ232920 AY003818 AY003835 AY003844 AY003714 AY003809 DQ454647 DQ454454 DQ454471 DQ454492 DQ454915 GU552745 GU552756 GU552770 DQ454424 DQ454524 DQ454812 DQ454885 DQ454891 DQ454983 DQ454662 DQ454913 FJ840305 FJ840316 FJ873819 FJ873835 FJ873939 FJ873998 FJ874018 FJ874053 FJ874076 EU350415 AJ008237 AY003828 AJ487494 AJ487503 AY003805 DQ100698 EF175433 EF441757 EU814965 EU814969 DQ454482 EU099127 AM183996 HQ392896 AJ239383 AM279491 GQ903488 HM995750 AF103301 AF103037 AF103086 AF103146 AF165100 HM774111 AF103361 JN110905 HM775055 HM773993 FJ385329 HM774299 HM774454 HM774805 JN110797 JN111157 L04326 GQ504865 GQ504893 GQ504963 GQ504975 HM773970 HM774033 HM774184 HM774282 HM774312 HM774358 HM774362 HM774394 HM774602 HM774747 HM774807 HM774864 HM774872 HM774884 HM774902 HM774908 HM774914 HM774917 HM774979 HM774993 HM775020 HM775028 HQ703988 HQ704021 HQ704022 JN111201 DQ100741 HM775041 HM775050 S56604 AF103104 AF103221 AY866717 EF624097 EF624098 EF624099 EF624100 EF624101 EF624102 EF624103 EF624104 EF624105 EF624106 EF624107 EF624108 EF624109 EF624110 EF624111 EF624222 AJ300779 AJ300783 AJ300785 AY960861 DQ926366 AF001791 DQ100888 AF485461 AF485467 AF485475 AJ290433 AY376111 AF471523 AY423164 AY423165 AY423166 AY423167 AY423168 AY423196 AY423201 DQ100661 AJ556637 AY165857 AY885183 DQ109964 DQ109966 L37310 U00590 AF471185 AJ389182 AY866729 AY941943 DQ187554 DQ187558 DQ187672 GU570324 HM994886 HM995057 HM995131 HM995134 HM995135 HM995636 HM995660 HM995664 HM995773 HM995858 HM995860 HM996049 HM996147 HM996163 HM996317 HM996335 HM996371 HM996422 HM996433 HM996484 HM996538 U00584 DQ187677 DQ187708 DQ322751 DQ322797 DQ322802 DQ322804 DQ322860 DQ322861 DQ322862 DQ322863 DQ322864 DQ322865 DQ322866 DQ322867 DQ322894 DQ322895 DQ322896 DQ322897 DQ322905 DQ322906 DQ322909 DQ322910 DQ322922 DQ322957 DQ322958 DQ840698 DQ840723 DQ840725 DQ840754 DQ840755 DQ840757 DQ840759 DQ840761 DQ840762 DQ840763 DQ840764 DQ840765 DQ840767 DQ840768 DQ840779 DQ840854 DQ840860 DQ840862 DQ840867 DQ840872 DQ840875 DQ926106 HM996194 AF098360 AF115120 AF151699 AF151701 AF471405 AF471406 AF471470 AJ488539 AJ606116 AJ606117 AY530318 AY686908 DQ100752 DQ100787 DQ100790 DQ100827 DQ100850 DQ926039 DQ926040 DQ926061 DQ926074 DQ926108 DQ926127 DQ926145 DQ926175 DQ926381 DQ926443 DQ926559 DQ926611 EF177960 EF178018 EF178108 EU794412 FJ195533 FJ385315 HQ378333 HQ378408 L19913 X87893 X95740 Z18836 AB021510 AB021520 AB063665 AB063803 AB063812 AB063892 AB066987 AB067027 AB067099 AB067112 AB067123 AB067237 AB067268 AF021995 AF022001 AF052526 AF062119 AF062188 AF062241 AF109406 AF174118 AF408728 AF471169 AF471171 AF471172 AF471177 AF471179 AF471180 AF471181 AF471182 AF471184 AF471186 AF471189 AF471194 AF471195 AF471198 AF471199 AF471203 AF471204 AF471205 AF471208 AF471212 AF471214 AF471220 AF471386 AF471522 AF471527 AF471533 AF471543 AJ238036 AJ238038 AJ238040 AJ239359 AJ245208 AJ245317 AJ271601 AJ300781 AJ300786 AJ300796 AJ414013 AJ488543 AJ491910 AJ555273 AJ556638 AJ556640 AJ556645 AJ556649 AJ556658 AJ556659 AJ556660 AJ556664 AJ556667 AJ556668 AJ556669 AJ574777 AJ574779 AJ579141 AJ579162 AJ579198 AJ579216 AJ579217 AJ579233 AJ579234 AJ579239 AJ579269 AJ627231 AJ627236 AJ627237 AY033247 AY033256 AY033273 AY148344 AY281326 AY640478 AY685255 AY685317 AY955072 AY971017 AY971018 AY971074 AY971101 AY971123 DQ021409 DQ065716 DQ065724 DQ535273 DQ535337 DQ535344 DQ535374 DQ535415 DQ535435 DQ535457 DQ535480 DQ926153 DQ926159 DQ926221 DQ926410 DQ926544 DQ926553 DQ926573 DQ926614 EF177979 EF178025 EF178029 EF178039 EF178120 EF178121 EF178134 EF633799 EF633800 EU549723 EU794426 FJ385367 FJ481089 FJ492901 GQ856061 GQ903508 GQ903515 HM152524 HQ689704 JF806286 JF806288 JF806292 L39958 U00487 U00538 U03400 U76679 U85242 U85243 U96279 U96282 U96284 X62965 X99356 X99361 Z18822 Z95482 Z96960 Z96961 Z96962 Z96971 HM995657 AF283801 AJ249633 HM995748 HM995753 HM995770 HM995771 HM995772 HM995775 HM995873 Z14175 X69864 AY392917 AY393072 AY393151 AY393154 AY393160 X69863 X67908 Z14189 AF062138 AF062243 AF174030 AF174034 U79585 X59134 X65896 CU676308 BC041037 BC018747 BC062335 BC064496 TSC_hg19_v1_chr14_-_106518933 AK130614 AK097345 AK123975 AK126132 AK225676 BX640822	-36263	-	DQ454787 U64487 AF460704 AF460740 AF460807 DQ454554 AL389978 FJ385400 DQ454728 DQ454993 DQ454902 GQ232943 GU552699 AY003824 AY003849 DQ454431 EF566904 AY003777 DQ454493 DQ454848 GU552714 GU552717 DQ454498 DQ454515 DQ454965 DQ523862 EF407823 DQ454754 DQ454849 DQ454990 FJ840311 FJ840313 FJ840317 FJ840329 FJ840349 FJ873842 FJ873857 FJ873909 FJ873912 FJ873925 FJ874051 FJ874081 FJ874083 FJ874089 HM116118 AY003786 EU433870 EF175391 EF175399 EF175431 EF175439 EF441746 EU433865 EU667604 EU099143 EU099237 EU099244 EU099063 EU099194 EU099113 EU099200 AM183985 AM183986 EU099292 HQ392870 AF103124 DQ100718 AF103028 AF103040 AF103322 HM774410 L07309 L07310 L07312 JN110741 L03824 L03825 L04325 HM774027 HM774097 HM774142 HM774318 HM774446 HM774453 HM774557 HM774576 HM774604 HM774628 HM774645 HM774671 HM774698 HM774809 HM774847 HM774858 HM775011 HM775058 AF165102 HM775038 HM775039 HM775042 AF082199 EU146392 EU146393 EU146395 AY376083 AY376084 AF103217 AY485363 DQ100667 DQ926397 DQ926487 AF062294 DQ187521 DQ187649 DQ523968 DQ523986 DQ524059 DQ926170 DQ926613 GU570296 GU570301 HM995316 HM995318 HM995367 HM995592 HM995658 HM995661 HM995663 HM995671 HM995696 HM995697 HM995699 HM995792 HM995793 HM995795 HM995911 HM995912 HM995913 HM995914 HM995915 HM995916 HM995917 HM995918 HM996161 HM996278 DQ187668 DQ322752 DQ322795 DQ322799 DQ322834 DQ322835 DQ322836 DQ322837 DQ322838 DQ322839 DQ322840 DQ322841 DQ322842 DQ322843 DQ322847 DQ322848 DQ322849 DQ322850 DQ322851 DQ322852 DQ322853 DQ322854 DQ322907 DQ322908 DQ322924 DQ322985 DQ322986 DQ322987 DQ840668 DQ840696 DQ840724 DQ840738 DQ840869 DQ840885 DQ840898 DQ840902 DQ926246 DQ926249 DQ926313 DQ926315 AB063717 AB063810 AB066882 AB066982 AB067264 AB067265 AB363130 AB363133 AB363178 AB363229 AB363239 AF234248 AJ306671 AY033239 AY033240 AY376073 AY376086 AY376088 AY422530 AY530313 AY640532 AY846271 AY971070 AY971132 AY986395 AY986402 DQ065641 DQ065715 DQ100950 DQ926227 DQ926469 DQ926491 DQ926596 EF178046 EU549734 FJ195526 GU570302 HQ378386 Z46761 AB021522 AB063668 AB363134 AB363177 AB363231 AF021996 AF035794 AF115122 AF119800 AF119801 AF119802 AF119803 AF119804 AF151704 AF174095 AF471243 AF471244 AF471245 AF471248 AF471251 AF471252 AF471253 AJ389186 AJ414018 AJ555260 AJ579155 AJ579190 AJ579223 AJ579232 AJ579237 AJ627246 AY530315 AY685254 AY971117 DQ065650 DQ100894 DQ100911 DQ205140 DQ205152 DQ212511 DQ431495 DQ535391 DQ535412 DQ535423 DQ535428 DQ840729 DQ840811 DQ926123 DQ926333 DQ926625 EF178050 EF633766 EF633767 EF633768 EF633798 FJ492898 GU570300 GU570349 S77136 U64493 U64507 U85230 U96395 X62972 X63081 X64241 X99352 X99366 Z96969 Z96970 Z97036 HM995655 HM995787 HM995788 HM995789 HM995870 L33033 X67907 AY392930 AY393153 AY393157 AY393162 L08089 AF062269 L06912 S72664 X65897 X81736 X81744 X81754 Z11959 BC090940 X61013 X61014 BC073758 AK097320 AK125582 AK130539 AK130586 AK130844 AK301403 TSC_hg19_v1_chr14_-_106573761	18613	-	GU552766 DQ454945 DQ454680 DQ454800 DQ100736 HQ392877 AY062313 JN110910 JN111168 L03821 L04324 FJ385334 FJ385335 HM774019 HM774079 HM774175 HM774429 HM774436 HM774460 HM774566 HM774691 HM774780 HM774984 AF165105 AY062308 DQ100831 AJ300807 AB063700 AY423173 AY062309 DQ100870 GU570344 HM994897 HM994907 HM994915 HM995019 HM995419 HM995424 HM995733 HM995761 HM995921 HM995935 HM995953 HM996087 HM996247 HM996409 DQ840731 DQ840896 AB374202 AM279603 AY866783 DQ431491 EF178033 FJ385392 GU570335 AB021538 AB063673 AB066975 AB067002 AB067017 AB067076 AB067261 AB363102 AB363150 AF062210 AF098364 AF174056 AF174100 AF174120 AF301484 AF455549 AF471257 AF471259 AF471261 AF471262 AF471264 AF471363 AF471478 AF471487 AF471497 AJ007956 AJ389180 AJ399809 AJ413989 AJ555276 AJ556639 AJ579273 AM040537 AY268370 AY466509 AY685302 AY685304 AY921574 AY921575 AY927662 AY941906 D83675 DQ065617 DQ065728 DQ535267 DQ535281 DQ535298 DQ535334 DQ535408 DQ535485 DQ926436 DQ926504 DQ926507 DQ926513 DQ926550 EF178020 GU570303 GU570338 GU570343 GU570348 L33984 S65535 Z33898 AY670714 HM995884 AF062141 L03683 L38431 X65894 X81740 M18515 BC053984 TSC_hg19_v1_chr14_-_106586668	31559	-	AF028103 AF028108 Z11951 FJ840130 AF460713 AF460734 DQ454527 DQ454388 DQ454699 GQ232866 DQ454529 GQ232862 GQ232892 GU552777 EF407836 AY003841 DQ454714 GU552715 GU552744 DQ454664 DQ454668 DQ454679 DQ454889 DQ523850 AF209741 FJ385398 FJ873853 GU552716 GU552740 FJ840399 FJ840405 FJ873982 FJ840136 FJ840137 FJ840146 FJ873844 FJ873859 FJ873968 AJ008185 AJ008243 DQ454505 AY003713 AY003823 AY003842 EU433861 AF103214 EF441758 AF209733 AF209739 M18511 EU099088 EU099091 EU099108 EU099125 EU099214 DQ100874 AF103360 AF103031 AF103055 AF103172 AF103027 AY062317 HM773987 JN110484 JN110743 JN110870 JN110880 JN110904 JN111065 FJ385409 FJ385427 GQ504866 HM774017 HM774087 HM774308 HM774638 HM774746 HM774912 HM774921 AF032354 AF103227 AF103255 AF082194 EU146316 EU146375 EU146379 EU146381 EU146388 EU146390 EU146391 AJ271553 AJ300806 DQ926562 L38566 AB066857 HM995144 AF035789 AF035799 AF035798 L26034 AF062296 AF062303 AF471268 DQ454900 DQ524054 HM995097 HM995098 HM995245 HM995265 HM995270 HM995272 HM995274 HM995569 HM995686 HM995688 HM995689 HM995690 HM995691 HM995692 HM995930 HM995937 HM995946 HM996125 HM996208 HM996383 HM996458 DQ322777 DQ840774 DQ840820 DQ840842 DQ840897 AJ278771 AY686927 AY866567 AY998725 DQ100923 DQ100931 DQ926186 DQ926328 DQ926496 EF178079 FJ195531 FJ195532 FJ385300 FJ385301 FJ385374 FJ385399 HM995143 L39128 X79165 AB021509 AB021517 AB021528 AB021540 AB063657 AB063800 AB063845 AB066984 AB067025 AB067128 AB363162 AB363202 AB363206 AB373605 AB373606 AB373610 AB373616 AB373630 AB373634 AF021972 AF035026 AF174091 AF471269 AF471270 AF471271 AF471274 AF471276 AF471277 AF471278 AF471279 AJ249632 AJ401163 AJ401164 AJ556720 AJ579094 AJ579101 AJ579115 AJ579140 AJ579160 AJ579180 AJ579219 AJ579227 AJ579235 AJ579263 AJ579275 AJ579285 AJ627238 AY055479 AY376081 AY971142 D83688 D83689 DQ065634 DQ535287 DQ535290 DQ535292 DQ535322 DQ535337 DQ535365 DQ535372 DQ535396 DQ535403 DQ535404 DQ926160 DQ926428 DQ926446 DQ926474 DQ926484 DQ926537 DQ926556 EF028218 EF178024 FJ195520 FJ195538 FJ385323 GU570304 HM152485 HQ689757 U97245 X62954 X62960 X87453 X99364 Y12699 Z18319 Z18322 Z18323 Z75557 Z98737 Z98738 Z98739 Z98740 AJ401161 M34023 L14818 X56523 X56524 AF431053 AF431055 Z14169 AY505570 X81723 X81743 Z14216 Z80843 L29153 L29154 Z14960 M34032 BC065820 BC014667 TSC_hg19_v1_chr14_-_106610847 AK123981 AK301228 AK130434 AK289373	55653	-	BC021276|IGHD|3495|immunoglobulin heavy constant delta##BC006402|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097367|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123546|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128565|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128625|IGHD|3495|immunoglobulin heavy constant delta##AK129508|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640627|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC067091|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF283666|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC075846|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC037361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097906|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC041037|IGHM|3507|immunoglobulin heavy constant mu##BC018747|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC062335|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC064496|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097345|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK123975|IGH@|3492|immunoglobulin heavy locus##BX640822|IGH@|3492|immunoglobulin heavy locus##AL389978|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BC090940|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073758|IGHM|3507|immunoglobulin heavy constant mu##AK097320|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125582|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130539|IGHM|3507|immunoglobulin heavy constant mu##AK130586|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130844|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301403|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC065820|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC014667|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130434|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.965375	CTCF.p2:20:0.965
chr1	200528121	200528252	reg1014480.p1	9.816	+	BC060820 NM_012482 TSC_hg19_v1_chr1_-_200379187 AK027284	-148992	-	TSC_hg19_v1_chr1_-_200379155 AK297233 AK022916 AK094701	-149069	-	AB384788 CU687444 AF125158 BC051905 TSC_hg19_v1_chr1_-_200378976	-149277	-	TSC_hg19_v1_chr1_-_200589869 D26361 NM_014875	61693	-	AK299219 BC020201 TSC_hg19_v1_chr1_-_200639024 AL136611 BC014183 AK307569	110843	-	TSC_hg19_v1_chr1_-_200639091 BC041801 NM_001031725	110922	-	BC060820|ZNF281|23528|zinc finger protein 281##NM_012482|ZNF281|23528|zinc finger protein 281##AK027284|ZNF281|23528|zinc finger protein 281##AK297233|ZNF281|23528|zinc finger protein 281##AK022916|ZNF281|23528|zinc finger protein 281##AK094701|ZNF281|23528|zinc finger protein 281##AF125158|ZNF281|23528|zinc finger protein 281##BC051905|ZNF281|23528|zinc finger protein 281##D26361|KIF14|9928|kinesin family member 14##NM_014875|KIF14|9928|kinesin family member 14##AK299219|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC020201|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AL136611|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC014183|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK307569|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC041801|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_001031725|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	0.823717	CTCF.p2:-9:0.824
chr13	96130884	96131017	reg1012865.p1	9.816	+	NM_001160100 NM_182848 AK055855	-45096	+	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	-177238	-	X65666 X71136 AB464716 NM_007084	-766632	-	TSC_hg19_v1_chr13_+_96204946 NM_006984 BC010920 U89916 AK315737 DQ892831 DQ896077 CR456845	74024	+	AB385415 AF272347 AF272348 TSC_hg19_v1_chr13_-_96294398	163393	-	BC011450 AB023213 TSC_hg19_v1_chr13_-_96296961 BC041804 NM_014934 NM_198968	165990	-	NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##NM_006984|CLDN10|9071|claudin 10##BC010920|CLDN10|9071|claudin 10##U89916|CLDN10|9071|claudin 10##AK315737|CLDN10|9071|claudin 10##DQ892831|CLDN10|9071|claudin 10##DQ896077|CLDN10|9071|claudin 10##CR456845|CLDN10|9071|claudin 10##AF272347|DZIP1|22873|DAZ interacting protein 1##AF272348|DZIP1|22873|DAZ interacting protein 1##BC011450|DZIP1|22873|DAZ interacting protein 1##AB023213|DZIP1|22873|DAZ interacting protein 1##BC041804|DZIP1|22873|DAZ interacting protein 1##NM_014934|DZIP1|22873|DAZ interacting protein 1##NM_198968|DZIP1|22873|DAZ interacting protein 1	0.995492	CTCF.p2:2:0.995
chr15	73565846	73565941	reg1009974.p1	9.816	+	NM_001172623 NM_001172624 NM_002499 U61262 U72391 BC117161 BC143270 BC143271 BC143279 AB528479	-220973	+	TSC_hg19_v1_chr15_-_73076118 AK055526 NM_031284	-489770	-	BC044589 TSC_hg19_v1_chr15_-_73076072	-489822	-	TSC_hg19_v1_chr15_-_73661207 AJ132429 DQ854814	95314	-	AJ238850 NM_005477	95711	-	NM_001042367 AK131030 BC055412	169616	+	NM_001172623|NEO1|4756|neogenin 1##NM_001172624|NEO1|4756|neogenin 1##NM_002499|NEO1|4756|neogenin 1##U61262|NEO1|4756|neogenin 1##U72391|NEO1|4756|neogenin 1##BC117161|NEO1|4756|neogenin 1##BC143270|NEO1|4756|neogenin 1##BC143271|NEO1|4756|neogenin 1##BC143279|NEO1|4756|neogenin 1##AK055526|ADPGK|83440|ADP-dependent glucokinase##NM_031284|ADPGK|83440|ADP-dependent glucokinase##BC044589|ADPGK|83440|ADP-dependent glucokinase##AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60##AK131030|C15orf60|283677|chromosome 15 open reading frame 60##BC055412|C15orf60|283677|chromosome 15 open reading frame 60	0.994903	CTCF.p2:0:0.995
chr2	42009816	42009955	reg1014094.p1	9.816	+	Y12878 Y12885 AK291696 BX537482 NM_001112802	-1270313	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	-1330663	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-1352454	-	AK124893 NM_001242815	171057	-	TSC_hg19_v1_chr2_+_42275160 NM_138370	265247	+	AB528999 TSC_hg19_v1_chr2_+_42275979	266076	+	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)	0.996802	CTCF.p2:19:0.997
chr6	137910649	137910805	reg1012443.p1	9.816	+	BC051352 AK096362 NM_175747	-95202	-	TSC_hg19_v1_chr6_-_137540556 NM_000416	-370169	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-370182	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	277810	+	TSC_hg19_v1_chr6_-_138189314 AK124173	278623	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	517841	-	BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector	1.053218	CTCF.p2:-48:0.961
chr10	32635171	32635316	reg1010499.p1	9.815	+	TSC_hg19_v1_chr10_-_32345341 NM_004521	-289883	-	TSC_hg19_v1_chr10_-_32345335 BC080604 BC010885 BC111042 AK289413 AK299542 BC065267 AK307502	-289929	-	BC126279 BC126281 TSC_hg19_v1_chr10_-_32345152 X65873	-290075	-	CU691366 TSC_hg19_v1_chr10_-_32636082 AK092304 AX747467 AK309822	719	-	TSC_hg19_v1_chr10_-_32636116 AF277374 FJ230887 NM_025209	865	-	TSC_hg19_v1_chr10_-_32636137 BC036529 CR749375	906	-	NM_004521|KIF5B|3799|kinesin family member 5B##BC080604|KIF5B|3799|kinesin family member 5B##BC010885|KIF5B|3799|kinesin family member 5B##BC111042|KIF5B|3799|kinesin family member 5B##AK289413|KIF5B|3799|kinesin family member 5B##AK299542|KIF5B|3799|kinesin family member 5B##BC065267|KIF5B|3799|kinesin family member 5B##AK307502|KIF5B|3799|kinesin family member 5B##BC126279|KIF5B|3799|kinesin family member 5B##BC126281|KIF5B|3799|kinesin family member 5B##X65873|KIF5B|3799|kinesin family member 5B##AK092304|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AK309822|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AF277374|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##NM_025209|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##BC036529|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##CR749375|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	0.62167	CTCF.p2:27:0.622
chr10	8095375	8095480	reg1011537.p2	9.815	+	AJ292190 NM_031923 AL117661	-234719	+	TSC_hg19_v1_chr10_+_7860467 BC105593 BC073884 BC017320 BC045106 AK307657 AK307521 BC062352 BC028077	-234951	+	TSC_hg19_v1_chr10_+_7830141 NM_001001973 NM_005174 BC000931 BC020824 AK292896 AK296803 D16562 D16563 BC016812 AK294061 BC010380 BC000470 BC013394 BC013865 CU677727 CR457403 BC026049	-265287	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	1222	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	1348	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	2056	+	AJ292190|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##NM_031923|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##AL117661|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC105593|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC073884|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC017320|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC045106|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##AK307657|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##AK307521|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC062352|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC028077|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##NM_001001973|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##NM_005174|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC000931|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC020824|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##AK292896|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##AK296803|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##D16562|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##D16563|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC016812|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##AK294061|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC010380|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC000470|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC013394|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC013865|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##CR457403|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC026049|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3	0.0	
chr7	25133051	25133197	reg1010157.p1	9.815	+	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	-113380	-	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-335527	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-335785	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	31753	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	31816	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	86747	-	AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31	0.634276	CTCF.p2:8:0.634
chr22	32061738	32061851	reg1012816.p1	9.814	+	TSC_hg19_v1_chr22_-_32058202 AB528208 CU013140 CU013428 CR456540 DQ656048	-3586	-	TSC_hg19_v1_chr22_-_32026821 BC001482 NM_014338	-34962	-	BC033613 TSC_hg19_v1_chr22_+_32010180	-51628	+	NM_173566 TSC_hg19_v1_chr22_-_32146119	84334	-	NM_001242897 TSC_hg19_v1_chr22_+_32149953	88154	+	TSC_hg19_v1_chr22_+_32149962 AK294987	88169	+	CU013140|PISD|23761|phosphatidylserine decarboxylase##CU013428|PISD|23761|phosphatidylserine decarboxylase##CR456540|PISD|23761|phosphatidylserine decarboxylase##BC001482|PISD|23761|phosphatidylserine decarboxylase##NM_014338|PISD|23761|phosphatidylserine decarboxylase##BC033613|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##NM_173566|PRR14L|253143|proline rich 14-like##NM_001242897|DEPDC5|9681|DEP domain containing 5##AK294987|DEPDC5|9681|DEP domain containing 5	0.996933	CTCF.p2:-3:0.997
chr10	14520776	14520887	reg1010789.p1	9.813	+	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	-147981	-	TSC_hg19_v1_chr10_-_14050453 AK001072	-470339	-	TSC_hg19_v1_chr10_-_13749648 AK057828	-771142	-	TSC_hg19_v1_chr10_-_14646259 BC064407	125486	-	TSC_hg19_v1_chr10_-_14646423 BC072452	125598	-	AK127413 NM_031453	296064	-	AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##AK001072|FRMD4A|55691|FERM domain containing 4A##AK057828|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B##AK127413|FAM107B|83641|family with sequence similarity 107, member B##NM_031453|FAM107B|83641|family with sequence similarity 107, member B	0.0	
chr13	25315506	25315638	reg1015040.p1	9.813	+	AK292968 NM_001185085 NM_001676	-61024	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	-228661	-	BC040438 NM_178540 AY358145	-431855	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	22747	+	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	181397	-	TSC_hg19_v1_chr13_-_25497054 NM_018451	181497	-	AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##NM_018451|CENPJ|55835|centromere protein J	0.840777	CTCF.p2:7:0.841
chr14	106026837	106026976	reg1007485.p5	9.813	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-33965	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-69270	+	BX248038 NM_001134877	-70387	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	65430	-	BC040042 TSC_hg19_v1_chr14_-_106110945	84017	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	84210	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.618716	CTCF.p2:1:0.619
chr20	54823126	54823264	reg1014817.p1	9.813	+	NM_080617	-243184	-	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-1730981	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	-1998558	+	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	592	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	110829	+	BC002499 TSC_hg19_v1_chr20_-_54967272 BC006423 AF011468 BC001280 D84212 AK312776 BC027464 AK301769 NM_003600 NM_198433 NM_198434 NM_198435 NM_198436 NM_198437	144090	-	NM_080617|CBLN4|140689|cerebellin 4 precursor##BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B##BC002499|AURKA|6790|aurora kinase A##BC006423|AURKA|6790|aurora kinase A##AF011468|AURKA|6790|aurora kinase A##BC001280|AURKA|6790|aurora kinase A##D84212|AURKA|6790|aurora kinase A##AK312776|AURKA|6790|aurora kinase A##BC027464|AURKA|6790|aurora kinase A##AK301769|AURKA|6790|aurora kinase A##NM_003600|AURKA|6790|aurora kinase A##NM_198433|AURKA|6790|aurora kinase A##NM_198434|AURKA|6790|aurora kinase A##NM_198435|AURKA|6790|aurora kinase A##NM_198436|AURKA|6790|aurora kinase A##NM_198437|AURKA|6790|aurora kinase A	0.999222	CTCF.p2:8:0.999
chr6_dbb_hap3	2804837	2804966	reg1014485.p1	9.813	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.44778	CTCF.p2:-9:0.429
chr18	61491301	61491419	reg1012606.p1	9.812	+	NM_003784 AF027866 AK300828 BC069417 BC069442 BC069547 AK290876 BC106743 BC106744	-48681	+	NM_001040147 D88575	-71069	+	AK292775 AK296705 AK309537 AK309970 NM_080475	-121167	+	AK313159 BC012609 NM_001143818 NM_002575 Y00630 J02685 J03603 M18082	63603	+	TSC_hg19_v1_chr18_+_61575223 AK314936	83854	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	91384	+	NM_003784|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AF027866|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK300828|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069417|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069442|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069547|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK290876|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106743|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106744|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##NM_001040147|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##D88575|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK313159|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##BC012609|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_001143818|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_002575|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##Y00630|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J02685|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J03603|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##M18082|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##AK314936|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	0.985277	CTCF.p2:-2:0.985
chr3	123438095	123438198	reg1013843.p1	9.812	+	TSC_hg19_v1_chr3_-_123411207 AK300610	-26929	-	TSC_hg19_v1_chr3_-_123339426 NM_053031 NM_053032	-98670	-	BC113458 BC113456 BC100761 BC100762 BC100763 AF096773 AF096774 AF096775 AK314412 TSC_hg19_v1_chr3_-_123339352 BC017811 BC107783 Y09530 BC064420 AK314443	-98862	-	TSC_hg19_v1_chr3_-_123603158 BC064695 NM_053025 NM_053026 NM_053027 NM_053028	165025	-	TSC_hg19_v1_chr3_-_123680077 AK123060 AK307847 AK294979 BC040285	241940	-	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	242109	-	AK300610|MYLK|4638|myosin light chain kinase##NM_053031|MYLK|4638|myosin light chain kinase##NM_053032|MYLK|4638|myosin light chain kinase##BC113458|MYLK|4638|myosin light chain kinase##BC113456|MYLK|4638|myosin light chain kinase##BC100761|MYLK|4638|myosin light chain kinase##BC100762|MYLK|4638|myosin light chain kinase##BC100763|MYLK|4638|myosin light chain kinase##AF096773|MYLK|4638|myosin light chain kinase##AF096774|MYLK|4638|myosin light chain kinase##AF096775|MYLK|4638|myosin light chain kinase##AK314412|MYLK|4638|myosin light chain kinase##BC017811|MYLK|4638|myosin light chain kinase##BC107783|MYLK|4638|myosin light chain kinase##Y09530|MYLK|4638|myosin light chain kinase##BC064420|MYLK|4638|myosin light chain kinase##AK314443|MYLK|4638|myosin light chain kinase##BC064695|MYLK|4638|myosin light chain kinase##NM_053025|MYLK|4638|myosin light chain kinase##NM_053026|MYLK|4638|myosin light chain kinase##NM_053027|MYLK|4638|myosin light chain kinase##NM_053028|MYLK|4638|myosin light chain kinase##AK123060|CCDC14|64770|coiled-coil domain containing 14##AK307847|CCDC14|64770|coiled-coil domain containing 14##AK294979|CCDC14|64770|coiled-coil domain containing 14##BC040285|CCDC14|64770|coiled-coil domain containing 14##AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14	0.999793	CTCF.p2:1:1.000
chr4	100870226	100870369	reg1013943.p1	9.812	+	TSC_hg19_v1_chr4_-_100867874 NM_001031723	-2424	-	HQ257892 TSC_hg19_v1_chr4_-_100867740 AY358272 BX537609 AL833412 BC022248	-2543	-	TSC_hg19_v1_chr4_-_100815667 NM_001243736 NM_021970	-54613	-	BC039005 TSC_hg19_v1_chr4_-_100871430 AK315413 M37583 X52317	1127	-	AY597416 BC018002 BC020936 D28450 TSC_hg19_v1_chr4_-_100871433	1159	-	TSC_hg19_v1_chr4_-_100871513 AK056803 NM_002106 BC103743	1217	-	NM_001031723|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##HQ257892|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##AY358272|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##BX537609|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##AL833412|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##BC022248|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##NM_001243736|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##NM_021970|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC039005|H2AFZ|3015|H2A histone family, member Z##AK315413|H2AFZ|3015|H2A histone family, member Z##M37583|H2AFZ|3015|H2A histone family, member Z##X52317|H2AFZ|3015|H2A histone family, member Z##AY597416|H2AFZ|3015|H2A histone family, member Z##BC018002|H2AFZ|3015|H2A histone family, member Z##BC020936|H2AFZ|3015|H2A histone family, member Z##D28450|H2AFZ|3015|H2A histone family, member Z##AK056803|H2AFZ|3015|H2A histone family, member Z##NM_002106|H2AFZ|3015|H2A histone family, member Z##BC103743|H2AFZ|3015|H2A histone family, member Z	0.128549	
chr3	5017924	5018058	reg1013694.p1	9.811	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-482795	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-482863	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-482960	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	3125	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	3190	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	3363	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.716768	CTCF.p2:16:0.602
chr4	42819626	42819745	reg1012105.p1	9.811	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	-160597	-	NM_001080505	-419830	+	AB126828 AB126829 NM_001159547 NM_207406	-664791	-	AB528853 NM_001080476	75596	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	1630868	-	AK123347 NM_198353	1631138	-	BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8	0.072211	
chr15	49527915	49528045	reg1012002.p1	9.810	+	TSC_hg19_v1_chr15_+_49462423 NM_002044 AK301361 BC005141 AK098049 AK316440 M84443 BT006901 CU675015 DQ890583 DQ893742	-65517	+	TSC_hg19_v1_chr15_+_49447990 AF461816 AL832745 NM_001001556	-79989	+	AF120268 L40388 TSC_hg19_v1_chr15_-_49447811 AB462991 CR542063 CU680378 EU446744 EU831466 EU831553 AK222590 AB209799 AF100762 AF212227 AF084260 BC012629 AK312643 AK295598 NM_001143887 NM_004236	-80171	-	NM_002009 BC010956 AK313160 M60828 S81661	187436	+	BC048125 BC048139 AK057362 NM_152647	385103	-	TSC_hg19_v1_chr15_+_49913254 NM_001144955 NM_020234 BC018028 AF168717 AK290184 BC093073 BC032535	385269	+	NM_002044|GALK2|2585|galactokinase 2##AK301361|GALK2|2585|galactokinase 2##BC005141|GALK2|2585|galactokinase 2##AK098049|GALK2|2585|galactokinase 2##AK316440|GALK2|2585|galactokinase 2##M84443|GALK2|2585|galactokinase 2##BT006901|GALK2|2585|galactokinase 2##DQ890583|GALK2|2585|galactokinase 2##DQ893742|GALK2|2585|galactokinase 2##AF461816|GALK2|2585|galactokinase 2##AL832745|GALK2|2585|galactokinase 2##NM_001001556|GALK2|2585|galactokinase 2##AF120268|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##L40388|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##CR542063|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU446744|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831466|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831553|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK222590|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AB209799|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF100762|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF212227|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF084260|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##BC012629|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK312643|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK295598|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_001143887|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_004236|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_002009|FGF7|2252|fibroblast growth factor 7##BC010956|FGF7|2252|fibroblast growth factor 7##AK313160|FGF7|2252|fibroblast growth factor 7##M60828|FGF7|2252|fibroblast growth factor 7##S81661|FGF7|2252|fibroblast growth factor 7##BC048125|C15orf33|196951|chromosome 15 open reading frame 33##BC048139|C15orf33|196951|chromosome 15 open reading frame 33##AK057362|C15orf33|196951|chromosome 15 open reading frame 33##NM_152647|C15orf33|196951|chromosome 15 open reading frame 33##NM_001144955|DTWD1|56986|DTW domain containing 1##NM_020234|DTWD1|56986|DTW domain containing 1##BC018028|DTWD1|56986|DTW domain containing 1##AF168717|DTWD1|56986|DTW domain containing 1##AK290184|DTWD1|56986|DTW domain containing 1##BC093073|DTWD1|56986|DTW domain containing 1##BC032535|DTWD1|56986|DTW domain containing 1	0.918425	CTCF.p2:-9:0.918
chr5	90079643	90079771	reg1013454.p1	9.810	+	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	-225093	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-254341	-	NM_006467 AK295434 U93868	-309005	+	AK091866 TSC_hg19_v1_chr5_-_90610220	530538	-	TSC_hg19_v1_chr5_+_90676181 BC043415	596455	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	599425	-	AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3	0.94821	CTCF.p2:15:0.948
chr11	65790017	65790124	reg1012641.p1	9.809	+	NM_001323 BC031334 U62800 U81233 CR456872	-10582	+	TSC_hg19_v1_chr11_+_65769973 BC005942 AK311961 BC008705	-19946	+	TSC_hg19_v1_chr11_+_65769954 AF044773	-20150	+	AF407333 AB527999 CU689580 BC036522 BC032950 NM_053054	3848	-	AB053232 NM_033036	26580	-	TSC_hg19_v1_chr11_+_65819834 NM_006842 AK290850 BC010372 BC053577 BX537771 AB463285 BC000401 U41371	29770	+	NM_001323|CST6|1474|cystatin E/M##BC031334|CST6|1474|cystatin E/M##U62800|CST6|1474|cystatin E/M##U81233|CST6|1474|cystatin E/M##CR456872|CST6|1474|cystatin E/M##BC005942|BANF1|8815|barrier to autointegration factor 1##AK311961|BANF1|8815|barrier to autointegration factor 1##BC008705|BANF1|8815|barrier to autointegration factor 1##AF044773|BANF1|8815|barrier to autointegration factor 1##AF407333|CATSPER1|117144|cation channel, sperm associated 1##BC036522|CATSPER1|117144|cation channel, sperm associated 1##BC032950|CATSPER1|117144|cation channel, sperm associated 1##NM_053054|CATSPER1|117144|cation channel, sperm associated 1##AB053232|GAL3ST3|89792|galactose-3-O-sulfotransferase 3##NM_033036|GAL3ST3|89792|galactose-3-O-sulfotransferase 3##NM_006842|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##AK290850|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BC053577|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BX537771|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BC000401|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##U41371|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa	0.045744	
chr11	71688906	71689054	reg1012117.p1	9.809	+	TSC_hg19_v1_chr11_+_71640092 AL833638 AK023139 AK094508 CR457298 BC009672 BC093084 BC117273	-48869	+	NM_018320	-49213	+	NM_001242853	-99482	+	TSC_hg19_v1_chr11_+_71709954 NM_001039659 NM_001039660 NM_173044 AF215907 BC044215 AF110801 NM_005699 NM_173042	21049	+	NM_001145057 AF122906	21695	+	AF110799 AF110800 NM_001145055 AB590783 CU692186 AB019504	22020	+	AL833638|RNF121|55298|ring finger protein 121##AK023139|RNF121|55298|ring finger protein 121##AK094508|RNF121|55298|ring finger protein 121##CR457298|RNF121|55298|ring finger protein 121##BC009672|RNF121|55298|ring finger protein 121##BC093084|RNF121|55298|ring finger protein 121##BC117273|RNF121|55298|ring finger protein 121##NM_018320|RNF121|55298|ring finger protein 121##NM_001242853|LOC100129216|100129216|beta-defensin 131-like##NM_001039659|IL18BP|10068|interleukin 18 binding protein##NM_001039660|IL18BP|10068|interleukin 18 binding protein##NM_173044|IL18BP|10068|interleukin 18 binding protein##AF215907|IL18BP|10068|interleukin 18 binding protein##BC044215|IL18BP|10068|interleukin 18 binding protein##AF110801|IL18BP|10068|interleukin 18 binding protein##NM_005699|IL18BP|10068|interleukin 18 binding protein##NM_173042|IL18BP|10068|interleukin 18 binding protein##NM_001145057|IL18BP|10068|interleukin 18 binding protein##AF122906|IL18BP|10068|interleukin 18 binding protein##AF110799|IL18BP|10068|interleukin 18 binding protein##AF110800|IL18BP|10068|interleukin 18 binding protein##NM_001145055|IL18BP|10068|interleukin 18 binding protein##AB019504|IL18BP|10068|interleukin 18 binding protein	0.998484	CTCF.p2:2:0.998
chr1	86973813	86973933	reg1012474.p1	9.809	+	NM_001285 TSC_hg19_v1_chr1_+_86934607 AK314375 AK291999 AK097057 AF127036	-39286	+	NM_006536 AF043977 AK296719 AK290348 AK307937 BC041096 AB026833 AF127980	-84024	+	BC091490 TSC_hg19_v1_chr1_-_86862004 AB033055 BC047368 BC009779 BC012579 AK308351 AK302792 BC026105 AK303209 NM_001007022 NM_001184765 NM_001184766 NM_020729	-111898	-	NM_012128 AK000072 AK314430 BC113687 BC113689 AF127035 AY358470 HQ258531 AK307785 AK307898 AK293766	38968	+	TSC_hg19_v1_chr1_+_87170254 NM_001206651 NM_001206652 NM_001206653 NM_016009	196378	+	TSC_hg19_v1_chr1_+_87170289 AK303710 AB007960 AK225864 AK001954	196505	+	NM_001285|CLCA1|1179|chloride channel accessory 1##AK314375|CLCA1|1179|chloride channel accessory 1##AK291999|CLCA1|1179|chloride channel accessory 1##AK097057|CLCA1|1179|chloride channel accessory 1##AF127036|CLCA1|1179|chloride channel accessory 1##NM_006536|CLCA2|9635|chloride channel accessory 2##AF043977|CLCA2|9635|chloride channel accessory 2##AK290348|CLCA2|9635|chloride channel accessory 2##AK307937|CLCA2|9635|chloride channel accessory 2##BC041096|CLCA2|9635|chloride channel accessory 2##AB026833|CLCA2|9635|chloride channel accessory 2##AF127980|CLCA2|9635|chloride channel accessory 2##BC091490|ODF2L|57489|outer dense fiber of sperm tails 2-like##AB033055|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC047368|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC009779|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC012579|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK308351|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK302792|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC026105|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK303209|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001007022|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184765|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184766|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_020729|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_012128|CLCA4|22802|chloride channel accessory 4##AK000072|CLCA4|22802|chloride channel accessory 4##AK314430|CLCA4|22802|chloride channel accessory 4##BC113687|CLCA4|22802|chloride channel accessory 4##BC113689|CLCA4|22802|chloride channel accessory 4##AF127035|CLCA4|22802|chloride channel accessory 4##AY358470|CLCA4|22802|chloride channel accessory 4##HQ258531|CLCA4|22802|chloride channel accessory 4##AK307785|CLCA4|22802|chloride channel accessory 4##AK307898|CLCA4|22802|chloride channel accessory 4##AK293766|CLCA4|22802|chloride channel accessory 4##NM_001206651|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_001206652|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_001206653|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK303710|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AB007960|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK225864|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK001954|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	0.0	
chr21	47567423	47567538	reg1012721.p1	9.808	+	M34570 TSC_hg19_v1_chr21_+_47546455	-21039	+	AL360197 TSC_hg19_v1_chr21_+_47545943	-21560	+	TSC_hg19_v1_chr21_+_47545200 BT006913	-22284	+	BC136383 BC136395 BC052248 AF169017 AF289021 AF289022 AF289023 AF289024 NM_006657 NM_206965 TSC_hg19_v1_chr21_-_47575491	8003	-	AL136871 TSC_hg19_v1_chr21_-_47604330	36836	-	TSC_hg19_v1_chr21_-_47604340 BC084577	36866	-	M34570|COL6A2|1292|collagen, type VI, alpha 2##AL360197|COL6A2|1292|collagen, type VI, alpha 2##BT006913|COL6A2|1292|collagen, type VI, alpha 2##BC136383|FTCD|10841|formiminotransferase cyclodeaminase##BC136395|FTCD|10841|formiminotransferase cyclodeaminase##BC052248|FTCD|10841|formiminotransferase cyclodeaminase##AF169017|FTCD|10841|formiminotransferase cyclodeaminase##AF289021|FTCD|10841|formiminotransferase cyclodeaminase##AF289022|FTCD|10841|formiminotransferase cyclodeaminase##AF289023|FTCD|10841|formiminotransferase cyclodeaminase##AF289024|FTCD|10841|formiminotransferase cyclodeaminase##NM_006657|FTCD|10841|formiminotransferase cyclodeaminase##NM_206965|FTCD|10841|formiminotransferase cyclodeaminase##AL136871|C21orf56|84221|chromosome 21 open reading frame 56##BC084577|C21orf56|84221|chromosome 21 open reading frame 56	0.936353	CTCF.p2:7:0.936
chr9	74907193	74907322	reg1010510.p1	9.808	+	TSC_hg19_v1_chr9_+_74764417 CU690994 AK315988	-142805	+	TSC_hg19_v1_chr9_+_74764402 AB033084	-142858	+	AF095286 TSC_hg19_v1_chr9_+_74764386 AF019638	-142871	+	TSC_hg19_v1_chr9_+_74920350 AK095210	13094	+	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	72468	-	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	72843	-	AK315988|GDA|9615|guanine deaminase##AB033084|GDA|9615|guanine deaminase##AF095286|GDA|9615|guanine deaminase##AF019638|GDA|9615|guanine deaminase##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5	0.093605	
chr1	197149541	197149677	reg1012186.p1	9.807	+	AF509326 AY099892 AY367065 AY971955 AY971956 AY971957 BC015396 TSC_hg19_v1_chr1_-_197115800 AK226178 AK125107 NM_001206846 NM_018136	-33915	-	M14057 AB527321 AK290560 NM_001994	-113236	-	AK314026 NM_030787 BC026282 AF295327 BC111773 AB590626	-202880	+	BC132818 BC136600 AK128549 AY163816 NM_194314	20044	-	NM_001193640 NM_201253 AK299368 AK289733 AK307844 AB208923 AF154671 AY043324 AY043325 BC136271 BC143726 AJ748821	87828	+	AK000061 TSC_hg19_v1_chr1_-_197552357	402723	-	AF509326|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY099892|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY367065|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971955|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971956|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971957|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##BC015396|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK226178|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK125107|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_001206846|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_018136|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##M14057|F13B|2165|coagulation factor XIII, B polypeptide##AK290560|F13B|2165|coagulation factor XIII, B polypeptide##NM_001994|F13B|2165|coagulation factor XIII, B polypeptide##AK314026|CFHR5|81494|complement factor H-related 5##NM_030787|CFHR5|81494|complement factor H-related 5##BC026282|CFHR5|81494|complement factor H-related 5##AF295327|CFHR5|81494|complement factor H-related 5##BC111773|CFHR5|81494|complement factor H-related 5##BC132818|ZBTB41|360023|zinc finger and BTB domain containing 41##BC136600|ZBTB41|360023|zinc finger and BTB domain containing 41##AK128549|ZBTB41|360023|zinc finger and BTB domain containing 41##AY163816|ZBTB41|360023|zinc finger and BTB domain containing 41##NM_194314|ZBTB41|360023|zinc finger and BTB domain containing 41##NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)##NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)##AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)##AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)##AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)##AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)##AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)##BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)##BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)##AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)##AK000061|DENND1B|163486|DENN/MADD domain containing 1B	0.992702	CTCF.p2:0:0.993
chr16	58155929	58156055	reg1014019.p1	9.807	+	BC036495 BC055428 TSC_hg19_v1_chr16_+_58059491	-96510	+	NM_002428	-96711	+	TSC_hg19_v1_chr16_+_58035310 AK293220 AK298473 AK303121 BC010099 AK301494 BC004415 BC007774 BC006291 BC021554	-120660	+	TSC_hg19_v1_chr16_-_58163283 AK027099 AK297819 BC005152 AF087845 AF093680	7240	-	TSC_hg19_v1_chr16_-_58163286 NM_013242	7318	-	DQ893025 DQ896269 AB463465 BC008812 NM_001896	75719	-	BC036495|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##BC055428|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##NM_002428|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##AK293220|C16orf57|79650|chromosome 16 open reading frame 57##AK298473|C16orf57|79650|chromosome 16 open reading frame 57##AK303121|C16orf57|79650|chromosome 16 open reading frame 57##BC010099|C16orf57|79650|chromosome 16 open reading frame 57##AK301494|C16orf57|79650|chromosome 16 open reading frame 57##BC004415|C16orf57|79650|chromosome 16 open reading frame 57##BC007774|C16orf57|79650|chromosome 16 open reading frame 57##BC006291|C16orf57|79650|chromosome 16 open reading frame 57##BC021554|C16orf57|79650|chromosome 16 open reading frame 57##AK027099|C16orf80|29105|chromosome 16 open reading frame 80##AK297819|C16orf80|29105|chromosome 16 open reading frame 80##BC005152|C16orf80|29105|chromosome 16 open reading frame 80##AF087845|C16orf80|29105|chromosome 16 open reading frame 80##AF093680|C16orf80|29105|chromosome 16 open reading frame 80##NM_013242|C16orf80|29105|chromosome 16 open reading frame 80##DQ893025|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##DQ896269|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##BC008812|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##NM_001896|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide	0.0	
chr2	228904595	228904725	reg1013831.p1	9.807	+	AK097409 NM_178821 BC036377 AK098821 AK301861	-168308	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	-226069	+	AF271633 BC032014 AK301490 AF283317 AK312464 NM_025243	-321939	-	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	141702	-	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	1231345	-	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	1674588	-	AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AF271633|SLC19A3|80704|solute carrier family 19, member 3##BC032014|SLC19A3|80704|solute carrier family 19, member 3##AK301490|SLC19A3|80704|solute carrier family 19, member 3##AF283317|SLC19A3|80704|solute carrier family 19, member 3##AK312464|SLC19A3|80704|solute carrier family 19, member 3##NM_025243|SLC19A3|80704|solute carrier family 19, member 3##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing	0.93054	CTCF.p2:5:0.931
chrX	19923035	19923163	reg1013983.p1	9.807	+	TSC_hg19_v1_chrX_-_19905675 AK313308 AF230904 AY423734 NM_031892	-17395	-	TSC_hg19_v1_chrX_-_19905646 BC050663 BC015806	-17467	-	TSC_hg19_v1_chrX_-_19905450 AY542305	-17636	-	NM_198279	65282	-	AY092822 TSC_hg19_v1_chrX_-_20009180	86009	-	AK294788 NM_001168467	211653	-	AK313308|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF230904|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY423734|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_031892|SH3KBP1|30011|SH3-domain kinase binding protein 1##BC050663|SH3KBP1|30011|SH3-domain kinase binding protein 1##BC015806|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY542305|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_198279|CXorf23|256643|chromosome X open reading frame 23##AY092822|LOC729609|729609|uncharacterized LOC729609##AK294788|MAP7D2|256714|MAP7 domain containing 2##NM_001168467|MAP7D2|256714|MAP7 domain containing 2	0.034071	
chr11	58975531	58975657	reg1011712.p1	9.806	+	TSC_hg19_v1_chr11_+_58940008 AB023154 AB385405	-35565	+	TSC_hg19_v1_chr11_+_58939648 NM_015177	-35909	+	NM_022074 NM_198847 AK291453 BC071759 AK092061 AX747338	-63315	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	4813	-	BC140917 NM_001004729	156313	+	NM_001001954 BC136991	214842	-	AB023154|DTX4|23220|deltex homolog 4 (Drosophila)##NM_015177|DTX4|23220|deltex homolog 4 (Drosophila)##NM_022074|FAM111A|63901|family with sequence similarity 111, member A##NM_198847|FAM111A|63901|family with sequence similarity 111, member A##AK291453|FAM111A|63901|family with sequence similarity 111, member A##BC071759|FAM111A|63901|family with sequence similarity 111, member A##AK092061|FAM111A|63901|family with sequence similarity 111, member A##BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1##BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001001954|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC136991|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2	0.79116	CTCF.p2:0:0.791
chr11	62162412	62162527	reg1011082.p1	9.805	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	-57521	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	-57644	+	HQ258026 AY236538 BC130639 BC130645 AY359052 NM_206998	-95960	-	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	24067	+	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	151767	-	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	151845	-	AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##HQ258026|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY236538|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130639|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130645|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY359052|SCGB1D4|404552|secretoglobin, family 1D, member 4##NM_206998|SCGB1D4|404552|secretoglobin, family 1D, member 4##AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein	0.998877	CTCF.p2:0:0.999
chr1	171214745	171214839	reg1011283.p1	9.804	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	-60370	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	-154751	+	NM_001163629 NM_025063 AK027203 BC113390 BC113392	-310145	+	AK290113 AK315100 M64082 NM_002021 AK296198	2869	+	BC002780 NM_002022 Z11737	68636	+	TSC_hg19_v1_chr1_+_171454689 BC066968 NM_015172 BC058930 BC026108 BC045713 BC001260 BC006090	239902	+	NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##NM_001163629|C1orf129|80133|chromosome 1 open reading frame 129##NM_025063|C1orf129|80133|chromosome 1 open reading frame 129##AK027203|C1orf129|80133|chromosome 1 open reading frame 129##BC113390|C1orf129|80133|chromosome 1 open reading frame 129##BC113392|C1orf129|80133|chromosome 1 open reading frame 129##AK290113|FMO1|2326|flavin containing monooxygenase 1##AK315100|FMO1|2326|flavin containing monooxygenase 1##M64082|FMO1|2326|flavin containing monooxygenase 1##NM_002021|FMO1|2326|flavin containing monooxygenase 1##AK296198|FMO1|2326|flavin containing monooxygenase 1##BC002780|FMO4|2329|flavin containing monooxygenase 4##NM_002022|FMO4|2329|flavin containing monooxygenase 4##Z11737|FMO4|2329|flavin containing monooxygenase 4##BC066968|PRRC2C|23215|proline-rich coiled-coil 2C##NM_015172|PRRC2C|23215|proline-rich coiled-coil 2C##BC058930|PRRC2C|23215|proline-rich coiled-coil 2C##BC026108|PRRC2C|23215|proline-rich coiled-coil 2C##BC045713|PRRC2C|23215|proline-rich coiled-coil 2C##BC001260|PRRC2C|23215|proline-rich coiled-coil 2C##BC006090|PRRC2C|23215|proline-rich coiled-coil 2C	0.0	
chr2	102387257	102387396	reg1014456.p1	9.804	+	TSC_hg19_v1_chr2_+_102314168 NM_001242560 NM_004834 NM_145686 BC064691 AK296396 AF096300 NM_001242559 NM_145687 AB384511 AY212247 AY834276	-72974	+	AK131289 AK298610 NM_001145664 TSC_hg19_v1_chr2_-_102091212	-296133	-	TSC_hg19_v1_chr2_-_102003966 BC032949 BC047514 NM_153836 AB046109	-383337	-	TSC_hg19_v1_chr2_+_102508334 BC045694	121016	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	121206	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	221037	+	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK131289|RFX8|731220|regulatory factor X, 8##AK298610|RFX8|731220|regulatory factor X, 8##NM_001145664|RFX8|731220|regulatory factor X, 8##BC032949|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC047514|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_153836|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AB046109|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II	0.996101	CTCF.p2:-7:0.996
chr3	8483858	8483972	reg1008763.p1	9.803	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	-1581017	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	-1581116	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-3254424	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	59415	-	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	59600	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	59666	+	X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1	0.968235	CTCF.p2:-25:0.968
chr3	107409505	107409614	reg1012490.p1	9.802	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-167710	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-313249	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-449967	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	400314	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	531733	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	605842	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.993534	CTCF.p2:-3:0.994
chr8	67601283	67601378	reg1009796.p1	9.802	+	NM_001204173 NM_019607 TSC_hg19_v1_chr8_+_67579850 BX649057 BC014448	-21508	+	TSC_hg19_v1_chr8_-_67579486 CR936659	-21836	-	TSC_hg19_v1_chr8_-_67579447 AB058753 NM_025054	-21876	-	AK291428 NM_001033578 TSC_hg19_v1_chr8_+_67624708	23358	+	TSC_hg19_v1_chr8_+_67624989 CR933673	23638	+	NM_013257 NM_170709 TSC_hg19_v1_chr8_+_67687465 AK223523 AK074666	86125	+	NM_001204173|C8orf44-SGK3|100533105|C8orf44-SGK3 readthrough##NM_019607|C8orf44|56260|chromosome 8 open reading frame 44##BC014448|C8orf44|56260|chromosome 8 open reading frame 44##CR936659|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##AB058753|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##NM_025054|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##AK291428|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3##NM_001033578|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3##CR933673|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3##NM_013257|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3##NM_170709|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3##AK223523|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3##AK074666|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3	0.99914	CTCF.p2:-2:0.999
chr1	109655420	109655528	reg1011365.p3	9.801	+	BC127904 BC141949 BC141950 BC150515 TSC_hg19_v1_chr1_+_109648698	-6829	+	BC071822 TSC_hg19_v1_chr1_+_109642814	-12660	+	BC066918 AK075191 TSC_hg19_v1_chr1_+_109633380 AF164793 AK310192 BC008739 BC065186 NM_020141 AK291293 BC067116	-22080	+	NM_001122961	1004	-	TSC_hg19_v1_chr1_+_109656510 AY358366	1045	+	TSC_hg19_v1_chr1_+_109656574 NM_020775	1126	+	BC071822|SCARNA2|677766|small Cajal body-specific RNA 2##BC066918|TMEM167B|56900|transmembrane protein 167B##AK075191|TMEM167B|56900|transmembrane protein 167B##AF164793|TMEM167B|56900|transmembrane protein 167B##AK310192|TMEM167B|56900|transmembrane protein 167B##BC008739|TMEM167B|56900|transmembrane protein 167B##BC065186|TMEM167B|56900|transmembrane protein 167B##NM_020141|TMEM167B|56900|transmembrane protein 167B##AK291293|TMEM167B|56900|transmembrane protein 167B##BC067116|TMEM167B|56900|transmembrane protein 167B##NM_001122961|C1orf194|127003|chromosome 1 open reading frame 194##AY358366|KIAA1324|57535|KIAA1324##NM_020775|KIAA1324|57535|KIAA1324	0.99344	CTCF.p2:-4:0.993
chr13	27858391	27858497	reg1011166.p1	9.801	+	TSC_hg19_v1_chr13_+_27844966 HQ258126	-13437	+	AY439004 NM_206827	-13981	+	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	-32702	+	BC143711 D32257 NM_002097 TSC_hg19_v1_chr13_+_27998761 AB590496 U14134 U20272	140327	+	TSC_hg19_v1_chr13_-_28024327 BC039599 NM_001166262 NM_001166261	165865	-	AF265440 TSC_hg19_v1_chr13_-_28024702 BC046166 NM_001166263 NM_152912	166278	-	HQ258126|RASL11A|387496|RAS-like, family 11, member A##AY439004|RASL11A|387496|RAS-like, family 11, member A##NM_206827|RASL11A|387496|RAS-like, family 11, member A##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21##BC143711|GTF3A|2971|general transcription factor IIIA##D32257|GTF3A|2971|general transcription factor IIIA##NM_002097|GTF3A|2971|general transcription factor IIIA##U14134|GTF3A|2971|general transcription factor IIIA##U20272|GTF3A|2971|general transcription factor IIIA##BC039599|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166262|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166261|MTIF3|219402|mitochondrial translational initiation factor 3##BC046166|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166263|MTIF3|219402|mitochondrial translational initiation factor 3##NM_152912|MTIF3|219402|mitochondrial translational initiation factor 3	0.0	
chr18	55989405	55989522	reg1012619.p2	9.801	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-100613	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-100660	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-100701	+	BX647796 NM_052947	306725	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	349178	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	349265	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.861544	CTCF.p2:19:0.862
chr6	68906677	68906774	reg1011390.p1	9.801	+	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	-307697	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	-2489632	-	AY358133 NM_198283 AK310478	-2617020	-	AL833240 TSC_hg19_v1_chr6_-_69345026	438247	-	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	438676	+	TSC_hg19_v1_chr6_-_70506472 AB074281	1599752	-	AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3##AB074281|LMBRD1|55788|LMBR1 domain containing 1	0.794178	CTCF.p2:3:0.794
chr7	92857680	92857793	reg1011459.p1	9.801	+	TSC_hg19_v1_chr7_-_92855783 AK096002 AK298361 NM_001039372	-1953	-	BC136300 BC136301 BC046365 AY358345 NM_198151 BC139906	-8871	-	AF474973 AY195582 AY195583 AY195584 AY195585 AY195586 AY195587 DQ068177 TSC_hg19_v1_chr7_-_92777683 AB095926 NM_152703	-80066	-	BC017888 NM_017667 NM_024553 TSC_hg19_v1_chr7_+_92861678 AK126478 AL833112 AK055965 AK299582 AB100163 BC108708 BC132740 BC132742 AB058764 BC152424 CU676100 AB385511	3990	+	AB022178 NM_001164738	331385	-	AB022177 AK313996 NM_001164737 NM_001742	346302	-	AK096002|HEPACAM2|253012|HEPACAM family member 2##AK298361|HEPACAM2|253012|HEPACAM family member 2##NM_001039372|HEPACAM2|253012|HEPACAM family member 2##BC136300|HEPACAM2|253012|HEPACAM family member 2##BC136301|HEPACAM2|253012|HEPACAM family member 2##BC046365|HEPACAM2|253012|HEPACAM family member 2##AY358345|HEPACAM2|253012|HEPACAM family member 2##NM_198151|HEPACAM2|253012|HEPACAM family member 2##BC139906|HEPACAM2|253012|HEPACAM family member 2##AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like##DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like##AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like##NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like##BC017888|CCDC132|55610|coiled-coil domain containing 132##NM_017667|CCDC132|55610|coiled-coil domain containing 132##NM_024553|CCDC132|55610|coiled-coil domain containing 132##AK126478|CCDC132|55610|coiled-coil domain containing 132##AL833112|CCDC132|55610|coiled-coil domain containing 132##AK055965|CCDC132|55610|coiled-coil domain containing 132##AK299582|CCDC132|55610|coiled-coil domain containing 132##AB100163|CCDC132|55610|coiled-coil domain containing 132##BC108708|CCDC132|55610|coiled-coil domain containing 132##BC132740|CCDC132|55610|coiled-coil domain containing 132##BC132742|CCDC132|55610|coiled-coil domain containing 132##AB058764|CCDC132|55610|coiled-coil domain containing 132##BC152424|CCDC132|55610|coiled-coil domain containing 132##AB022178|CALCR|799|calcitonin receptor##NM_001164738|CALCR|799|calcitonin receptor##AB022177|CALCR|799|calcitonin receptor##AK313996|CALCR|799|calcitonin receptor##NM_001164737|CALCR|799|calcitonin receptor##NM_001742|CALCR|799|calcitonin receptor	0.995216	CTCF.p2:5:0.995
chr17	73760753	73760886	reg1013537.p2	9.800	+	BC109238 TSC_hg19_v1_chr17_+_73723807	-37048	+	NM_001005619 X52186 AF011375	-40040	+	BC118916 TSC_hg19_v1_chr17_+_73717603 AB208913	-43218	+	BT007005 CU674592 TSC_hg19_v1_chr17_-_73761274 U26401 AK316181 AK314890 AK303748 BC001166 AK130064 AK310203 NM_000154 AK303832	462	-	L05088 TSC_hg19_v1_chr17_-_73774461	13636	-	BC108701 AF218029 BC001124 BC006497 BC012813 BC017558 TSC_hg19_v1_chr17_-_73775861 BX647280 AK130772 AK304607 AK312762 BX537379 NM_005324	15022	-	BC109238|ITGB4|3691|integrin, beta 4##NM_001005619|ITGB4|3691|integrin, beta 4##X52186|ITGB4|3691|integrin, beta 4##AF011375|ITGB4|3691|integrin, beta 4##BC118916|ITGB4|3691|integrin, beta 4##AB208913|ITGB4|3691|integrin, beta 4##BT007005|GALK1|2584|galactokinase 1##U26401|GALK1|2584|galactokinase 1##AK316181|GALK1|2584|galactokinase 1##AK314890|GALK1|2584|galactokinase 1##AK303748|GALK1|2584|galactokinase 1##BC001166|GALK1|2584|galactokinase 1##AK130064|GALK1|2584|galactokinase 1##AK310203|GALK1|2584|galactokinase 1##NM_000154|GALK1|2584|galactokinase 1##AK303832|GALK1|2584|galactokinase 1##BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)##AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)##NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)	0.695848	CTCF.p2:-7:0.492	CTCF.p2:30:0.204
chr1	78596591	78596715	reg1009282.p2	9.800	+	TSC_hg19_v1_chr1_+_78511749 AK225941 AB073737 AB528004 CU690284	-84891	+	BC036075 NM_017655 TSC_hg19_v1_chr1_+_78511713	-84990	+	TSC_hg19_v1_chr1_+_78470622 U40992 AK313205 AB209922 BC034721 NM_007034	-126039	+	NM_000959 NM_001039585 AK292845 AK312816 AY485530 L24470 BC112965 AF004021	360131	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	489478	+	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	518845	+	AK225941|GIPC2|54810|GIPC PDZ domain containing family, member 2##AB073737|GIPC2|54810|GIPC PDZ domain containing family, member 2##BC036075|GIPC2|54810|GIPC PDZ domain containing family, member 2##NM_017655|GIPC2|54810|GIPC PDZ domain containing family, member 2##U40992|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##AK313205|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##AB209922|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##BC034721|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##NM_007034|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##NM_000959|PTGFR|5737|prostaglandin F receptor (FP)##NM_001039585|PTGFR|5737|prostaglandin F receptor (FP)##AK292845|PTGFR|5737|prostaglandin F receptor (FP)##AK312816|PTGFR|5737|prostaglandin F receptor (FP)##AY485530|PTGFR|5737|prostaglandin F receptor (FP)##L24470|PTGFR|5737|prostaglandin F receptor (FP)##BC112965|PTGFR|5737|prostaglandin F receptor (FP)##AF004021|PTGFR|5737|prostaglandin F receptor (FP)##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44	0.99659	CTCF.p2:-15:0.997
chr4	42770261	42770396	reg1014498.p1	9.800	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	-111240	-	NM_001080505	-370473	+	AB126828 AB126829 NM_001159547 NM_207406	-615434	-	AB528853 NM_001080476	124953	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	1680225	-	AK123347 NM_198353	1680495	-	BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8	0.846014	CTCF.p2:8:0.846
chr7	48464517	48464642	reg1014159.p1	9.800	+	AK126220 AY204751 BX647273 NM_152701	-253524	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-335624	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	-335779	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	1348691	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	1668245	-	NM_001161834	1671102	+	AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72	0.901817	CTCF.p2:-12:0.902
chr1	172398613	172398737	reg1011039.p2	9.799	+	AL035295 NM_139240 BC038410	-8847	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-587972	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-647837	+	TSC_hg19_v1_chr1_-_172413202 BC006539	14513	-	TSC_hg19_v1_chr1_-_172413207 AK308201	14532	-	TSC_hg19_v1_chr1_-_172413210 AL035301 BC063473 NM_002642 NM_153747	14553	-	AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AL035301|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##BC063473|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##NM_002642|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##NM_153747|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	1.652266	CTCF.p2:34:0.655	CTCF.p2:-43:0.997
chr12	117650514	117650647	reg1014330.p1	9.799	+	AL136899 TSC_hg19_v1_chr12_-_117628277 BC091496 AF174601 AB020682 AK001699 AK314573 BC034045 BC042333 AK308141 NM_015002 NM_033624	-22355	-	DQ894644 TSC_hg19_v1_chr12_-_117537222 AF443207 BC015221 NM_001168325 NM_017899 AK000614	-113317	-	TSC_hg19_v1_chr12_+_117348781 BC037296 NM_012174 NM_153348 AK289621 AF176707 BC075823	-301794	+	NM_001204213	92276	-	NM_001204214	96634	-	AF446136 TSC_hg19_v1_chr12_-_117799037	148441	-	AL136899|FBXO21|23014|F-box protein 21##BC091496|FBXO21|23014|F-box protein 21##AF174601|FBXO21|23014|F-box protein 21##AB020682|FBXO21|23014|F-box protein 21##AK001699|FBXO21|23014|F-box protein 21##AK314573|FBXO21|23014|F-box protein 21##BC034045|FBXO21|23014|F-box protein 21##BC042333|FBXO21|23014|F-box protein 21##AK308141|FBXO21|23014|F-box protein 21##NM_015002|FBXO21|23014|F-box protein 21##NM_033624|FBXO21|23014|F-box protein 21##DQ894644|TESC|54997|tescalcin##AF443207|TESC|54997|tescalcin##BC015221|TESC|54997|tescalcin##NM_001168325|TESC|54997|tescalcin##NM_017899|TESC|54997|tescalcin##AK000614|TESC|54997|tescalcin##BC037296|FBXW8|26259|F-box and WD repeat domain containing 8##NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8##NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8##AK289621|FBXW8|26259|F-box and WD repeat domain containing 8##AF176707|FBXW8|26259|F-box and WD repeat domain containing 8##NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446136|NOS1|4842|nitric oxide synthase 1 (neuronal)	0.994134	CTCF.p2:-6:0.994
chr15	78600884	78601025	reg1013856.p1	9.799	+	TSC_hg19_v1_chr15_-_78591935 AF127799 AF100786 BC010080 AK311320 BC002565 AK024754 NM_025234 AK300838 AK304617 AK310477	-8981	-	BC031044 NM_001130183	-42414	+	TSC_hg19_v1_chr15_+_78556901 AK096616 NM_001130182	-44010	+	TSC_hg19_v1_chr15_+_78632694 NM_004378 AB593091 BC022069 S74445 DQ896830 EU176284 CR457017 AL110113	31749	+	TSC_hg19_v1_chr15_+_78730557 NM_004136	129567	+	TSC_hg19_v1_chr15_+_78730595 AB209403 BC017880 AK292992 BC117481 BC117483 BC143948 AB586699 HQ258663 M58511	129669	+	AF127799|WDR61|80349|WD repeat domain 61##AF100786|WDR61|80349|WD repeat domain 61##BC010080|WDR61|80349|WD repeat domain 61##AK311320|WDR61|80349|WD repeat domain 61##AK024754|WDR61|80349|WD repeat domain 61##NM_025234|WDR61|80349|WD repeat domain 61##AK300838|WDR61|80349|WD repeat domain 61##AK304617|WDR61|80349|WD repeat domain 61##BC031044|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_001130183|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##AK096616|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_001130182|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_004378|CRABP1|1381|cellular retinoic acid binding protein 1##AB593091|CRABP1|1381|cellular retinoic acid binding protein 1##BC022069|CRABP1|1381|cellular retinoic acid binding protein 1##S74445|CRABP1|1381|cellular retinoic acid binding protein 1##DQ896830|CRABP1|1381|cellular retinoic acid binding protein 1##EU176284|CRABP1|1381|cellular retinoic acid binding protein 1##CR457017|CRABP1|1381|cellular retinoic acid binding protein 1##AL110113|CRABP1|1381|cellular retinoic acid binding protein 1##NM_004136|IREB2|3658|iron-responsive element binding protein 2##AB209403|IREB2|3658|iron-responsive element binding protein 2##BC017880|IREB2|3658|iron-responsive element binding protein 2##AK292992|IREB2|3658|iron-responsive element binding protein 2##BC117481|IREB2|3658|iron-responsive element binding protein 2##BC117483|IREB2|3658|iron-responsive element binding protein 2##BC143948|IREB2|3658|iron-responsive element binding protein 2##HQ258663|IREB2|3658|iron-responsive element binding protein 2##M58511|IREB2|3658|iron-responsive element binding protein 2	0.958851	CTCF.p2:-18:0.959
chr1	113044560	113044683	reg1011652.p2	9.798	+	AB045116 NM_004185	-34582	+	TSC_hg19_v1_chr1_+_112938871 BC016029 AK022544 AK092791 AX747733	-105753	+	NM_018704 TSC_hg19_v1_chr1_+_112938844 AK023340	-105795	+	BC141825 NM_024494	6748	+	TSC_hg19_v1_chr1_+_113161808 BX648738	117172	+	BC027898 TSC_hg19_v1_chr1_-_113161750 AK021719 CU688054 EU831659 EU831742 AK295507 AK295955 AK291042 AK308727 AK304004 BC047392 BX640667 AB081317 AB081318 AB081319 AB081320 BC065501 NM_017744 NM_138727 NM_138728 NM_138729	117260	-	AB045116|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_004185|WNT2B|7482|wingless-type MMTV integration site family, member 2B##BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK092791|LOC100129406|100129406|uncharacterized LOC100129406##NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like##BC141825|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_024494|WNT2B|7482|wingless-type MMTV integration site family, member 2B##BX648738|CAPZA1|829|capping protein (actin filament) muscle Z-line, alpha 1##BC027898|ST7L|54879|suppression of tumorigenicity 7 like##AK021719|ST7L|54879|suppression of tumorigenicity 7 like##EU831659|ST7L|54879|suppression of tumorigenicity 7 like##EU831742|ST7L|54879|suppression of tumorigenicity 7 like##AK295507|ST7L|54879|suppression of tumorigenicity 7 like##AK295955|ST7L|54879|suppression of tumorigenicity 7 like##AK291042|ST7L|54879|suppression of tumorigenicity 7 like##AK308727|ST7L|54879|suppression of tumorigenicity 7 like##AK304004|ST7L|54879|suppression of tumorigenicity 7 like##BC047392|ST7L|54879|suppression of tumorigenicity 7 like##BX640667|ST7L|54879|suppression of tumorigenicity 7 like##AB081317|ST7L|54879|suppression of tumorigenicity 7 like##AB081318|ST7L|54879|suppression of tumorigenicity 7 like##AB081319|ST7L|54879|suppression of tumorigenicity 7 like##AB081320|ST7L|54879|suppression of tumorigenicity 7 like##BC065501|ST7L|54879|suppression of tumorigenicity 7 like##NM_017744|ST7L|54879|suppression of tumorigenicity 7 like##NM_138727|ST7L|54879|suppression of tumorigenicity 7 like##NM_138728|ST7L|54879|suppression of tumorigenicity 7 like##NM_138729|ST7L|54879|suppression of tumorigenicity 7 like	0.0	
chr12	27805213	27805342	reg1011692.p2	9.798	+	NM_001198915 NM_001198916 NM_003622 NM_177444 TSC_hg19_v1_chr12_+_27677138 BC022873 BC001560 AK294267 AB033056 BC050281 AB049149 AK314350 AF034802 BC046159	-128142	+	NM_001145010	-185535	+	BC043511 TSC_hg19_v1_chr12_-_27599649	-205673	-	NM_001029874 BC140921 AY662682	44186	+	NM_001190864 NM_021821 TSC_hg19_v1_chr12_+_27863756 AF182422	58455	+	TSC_hg19_v1_chr12_+_27863764 BC015862 AK075378 AK075515 BC109372 BC063515 BC028346	58497	+	NM_001198915|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_001198916|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_003622|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_177444|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC022873|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC001560|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK294267|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB033056|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC050281|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB049149|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK314350|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AF034802|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC046159|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_001145010|C12orf70|341346|chromosome 12 open reading frame 70##BC043511|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001029874|REP15|387849|RAB15 effector protein##BC140921|REP15|387849|RAB15 effector protein##AY662682|REP15|387849|RAB15 effector protein##NM_001190864|MRPS35|60488|mitochondrial ribosomal protein S35##NM_021821|MRPS35|60488|mitochondrial ribosomal protein S35##AF182422|MRPS35|60488|mitochondrial ribosomal protein S35##BC015862|MRPS35|60488|mitochondrial ribosomal protein S35##AK075378|MRPS35|60488|mitochondrial ribosomal protein S35##AK075515|MRPS35|60488|mitochondrial ribosomal protein S35##BC109372|MRPS35|60488|mitochondrial ribosomal protein S35##BC063515|MRPS35|60488|mitochondrial ribosomal protein S35##BC028346|MRPS35|60488|mitochondrial ribosomal protein S35	0.999132	CTCF.p2:11:0.999
chr3	172314018	172314134	reg1012425.p1	9.798	+	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	-72898	-	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	-147853	-	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-555739	+	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	114814	-	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	154448	+	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	158226	+	AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene	0.037145	
chr2	190008016	190008127	reg1012711.p1	9.797	+	TSC_hg19_v1_chr2_+_189839133 AB384877 X07240	-168898	+	X14420 BX649097 TSC_hg19_v1_chr2_+_189839117	-168953	+	TSC_hg19_v1_chr2_+_189839098 AK308010 NM_000090 BC028178	-168977	+	AB384824 J04478 Y14690 AB209045 BC086874 AK297936 TSC_hg19_v1_chr2_-_190044488 AK300146 M31365 NM_000393	36396	-	BC040567 NM_032168 TSC_hg19_v1_chr2_+_190306177	298099	+	TSC_hg19_v1_chr2_+_190306204 AK022607 AK290445 CR749440 AK022581 AK091546 AX747050	298138	+	X07240|COL3A1|1281|collagen, type III, alpha 1##X14420|COL3A1|1281|collagen, type III, alpha 1##AK308010|COL3A1|1281|collagen, type III, alpha 1##NM_000090|COL3A1|1281|collagen, type III, alpha 1##BC028178|COL3A1|1281|collagen, type III, alpha 1##J04478|COL5A2|1290|collagen, type V, alpha 2##Y14690|COL5A2|1290|collagen, type V, alpha 2##AB209045|COL5A2|1290|collagen, type V, alpha 2##BC086874|COL5A2|1290|collagen, type V, alpha 2##AK297936|COL5A2|1290|collagen, type V, alpha 2##AK300146|COL5A2|1290|collagen, type V, alpha 2##M31365|COL5A2|1290|collagen, type V, alpha 2##NM_000393|COL5A2|1290|collagen, type V, alpha 2##BC040567|WDR75|84128|WD repeat domain 75##NM_032168|WDR75|84128|WD repeat domain 75##AK022607|WDR75|84128|WD repeat domain 75##AK290445|WDR75|84128|WD repeat domain 75##CR749440|WDR75|84128|WD repeat domain 75##AK022581|WDR75|84128|WD repeat domain 75##AK091546|WDR75|84128|WD repeat domain 75	0.894521	CTCF.p2:-14:0.895
chr1	212236326	212236448	reg1012792.p1	9.796	+	TSC_hg19_v1_chr1_+_212209137 AF195765 AK299649 BC033297 AK027651 CU689622 CU689648 DQ641253	-27207	+	BC033540 TSC_hg19_v1_chr1_+_212209112 AF345896	-27269	+	NM_016448 AK292343 TSC_hg19_v1_chr1_+_212209090 AK000742 AK303346	-27373	+	TSC_hg19_v1_chr1_+_212458776 AK312530	222391	+	TSC_hg19_v1_chr1_+_212458867 L42373 NM_006243	222485	+	BC110883 TSC_hg19_v1_chr1_+_212459259	222827	+	AF195765|DTL|51514|denticleless homolog (Drosophila)##AK299649|DTL|51514|denticleless homolog (Drosophila)##BC033297|DTL|51514|denticleless homolog (Drosophila)##AK027651|DTL|51514|denticleless homolog (Drosophila)##DQ641253|DTL|51514|denticleless homolog (Drosophila)##BC033540|DTL|51514|denticleless homolog (Drosophila)##AF345896|DTL|51514|denticleless homolog (Drosophila)##NM_016448|DTL|51514|denticleless homolog (Drosophila)##AK292343|DTL|51514|denticleless homolog (Drosophila)##AK000742|DTL|51514|denticleless homolog (Drosophila)##AK303346|DTL|51514|denticleless homolog (Drosophila)##AK312530|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##L42373|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##NM_006243|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##BC110883|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha	0.821804	CTCF.p2:-1:0.822
chr1	236267095	236267206	reg1010783.p1	9.796	+	TSC_hg19_v1_chr1_-_236228670 BC012501	-38410	-	TSC_hg19_v1_chr1_-_236228496 AK297234	-38652	-	TSC_hg19_v1_chr1_-_236228477 NM_002508	-38672	-	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	38726	+	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	178038	-	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	178166	-	BC012501|NID1|4811|nidogen 1##AK297234|NID1|4811|nidogen 1##NM_002508|NID1|4811|nidogen 1##BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)	0.999042	CTCF.p2:-39:0.999
chr17	1552206	1552320	reg1012535.p1	9.796	+	D63483 AK310174 AB052950 AB052949 AB052947 D86864 TSC_hg19_v1_chr17_-_1549050 AK291810 AB052948 BC039735 NM_003693 NM_145350 NM_145352 AK298737	-3226	-	TSC_hg19_v1_chr17_-_1532115 BC027923 NM_152346 BC071859	-20119	-	AF289592 TSC_hg19_v1_chr17_-_1531711 AB120364	-20623	-	DQ892467 DQ895680 TSC_hg19_v1_chr17_-_1553162 BC031621 AF370391 AJ404317 AK055755 AK314767 AJ278711 NM_031430	982	-	TSC_hg19_v1_chr17_-_1588115 AB007510 AF092565	35845	-	TSC_hg19_v1_chr17_-_1588132 BC000579 BC064370 NM_006445	35891	-	D63483|SCARF1|8578|scavenger receptor class F, member 1##AK310174|SCARF1|8578|scavenger receptor class F, member 1##AB052950|SCARF1|8578|scavenger receptor class F, member 1##AB052949|SCARF1|8578|scavenger receptor class F, member 1##AB052947|SCARF1|8578|scavenger receptor class F, member 1##D86864|SCARF1|8578|scavenger receptor class F, member 1##AK291810|SCARF1|8578|scavenger receptor class F, member 1##AB052948|SCARF1|8578|scavenger receptor class F, member 1##BC039735|SCARF1|8578|scavenger receptor class F, member 1##NM_003693|SCARF1|8578|scavenger receptor class F, member 1##NM_145350|SCARF1|8578|scavenger receptor class F, member 1##NM_145352|SCARF1|8578|scavenger receptor class F, member 1##AK298737|SCARF1|8578|scavenger receptor class F, member 1##BC027923|SLC43A2|124935|solute carrier family 43, member 2##NM_152346|SLC43A2|124935|solute carrier family 43, member 2##BC071859|SLC43A2|124935|solute carrier family 43, member 2##AF289592|SLC43A2|124935|solute carrier family 43, member 2##AB120364|SLC43A2|124935|solute carrier family 43, member 2##DQ892467|RILP|83547|Rab interacting lysosomal protein##DQ895680|RILP|83547|Rab interacting lysosomal protein##BC031621|RILP|83547|Rab interacting lysosomal protein##AF370391|RILP|83547|Rab interacting lysosomal protein##AJ404317|RILP|83547|Rab interacting lysosomal protein##AK055755|RILP|83547|Rab interacting lysosomal protein##AK314767|RILP|83547|Rab interacting lysosomal protein##AJ278711|RILP|83547|Rab interacting lysosomal protein##NM_031430|RILP|83547|Rab interacting lysosomal protein##AB007510|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##AF092565|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##BC000579|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##BC064370|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##NM_006445|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	1.002854	CTCF.p2:51:0.968
chr17	4934806	4934896	reg1010363.p1	9.796	+	TSC_hg19_v1_chr17_+_4901226 NM_006612 AB014606 BC034993 AK307401	-33541	+	AY601906 AY601907 NM_001167985 NM_001167986 NM_001167987 NM_213726	-33947	-	AB020716 BC167148 BC167149 BC167151 BC167160 EU832136 EU832229 TSC_hg19_v1_chr17_-_4890947 AK302528 AL833974 BC142695 NM_001171166 NM_015099	-43899	-	AB362534 AK023570 AB362533 BC060810 NM_001104577 NM_017986	3861	-	TSC_hg19_v1_chr17_+_4981751 AK055288 NM_153018	46886	+	TSC_hg19_v1_chr17_+_4981774 AK290549 BC142962 BX647638	46934	+	NM_006612|KIF1C|10749|kinesin family member 1C##AB014606|KIF1C|10749|kinesin family member 1C##BC034993|KIF1C|10749|kinesin family member 1C##AK307401|KIF1C|10749|kinesin family member 1C##AY601906|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##AY601907|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167985|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167986|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167987|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_213726|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##AB020716|CAMTA2|23125|calmodulin binding transcription activator 2##BC167148|CAMTA2|23125|calmodulin binding transcription activator 2##BC167149|CAMTA2|23125|calmodulin binding transcription activator 2##BC167151|CAMTA2|23125|calmodulin binding transcription activator 2##BC167160|CAMTA2|23125|calmodulin binding transcription activator 2##EU832136|CAMTA2|23125|calmodulin binding transcription activator 2##EU832229|CAMTA2|23125|calmodulin binding transcription activator 2##AK302528|CAMTA2|23125|calmodulin binding transcription activator 2##AL833974|CAMTA2|23125|calmodulin binding transcription activator 2##BC142695|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171166|CAMTA2|23125|calmodulin binding transcription activator 2##NM_015099|CAMTA2|23125|calmodulin binding transcription activator 2##AB362534|GPR172B|55065|G protein-coupled receptor 172B##AK023570|GPR172B|55065|G protein-coupled receptor 172B##AB362533|GPR172B|55065|G protein-coupled receptor 172B##BC060810|GPR172B|55065|G protein-coupled receptor 172B##NM_001104577|GPR172B|55065|G protein-coupled receptor 172B##NM_017986|GPR172B|55065|G protein-coupled receptor 172B##AK055288|ZFP3|124961|zinc finger protein 3 homolog (mouse)##NM_153018|ZFP3|124961|zinc finger protein 3 homolog (mouse)##AK290549|ZFP3|124961|zinc finger protein 3 homolog (mouse)##BC142962|ZFP3|124961|zinc finger protein 3 homolog (mouse)##BX647638|ZFP3|124961|zinc finger protein 3 homolog (mouse)	0.019066	
chr18	48910961	48911055	reg1011738.p2	9.796	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-186968	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-187296	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-187782	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	955533	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	956105	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2779984	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.315209	CTCF.p2:6:0.315
chr10	74918926	74919052	reg1011304.p1	9.795	+	NM_015901 BC031224 AK303235 TSC_hg19_v1_chr10_+_74870272 AK300980 AK309755 AK316538 BC046173 BC038833	-48738	+	TSC_hg19_v1_chr10_-_74856725 NM_000917 NM_001017962 NM_001142595 NM_001142596	-62219	-	TSC_hg19_v1_chr10_-_74856621 M24486 M24487 AK312593 AK222960 BC034998	-62384	-	BC103720 TSC_hg19_v1_chr10_-_74927746	8736	-	TSC_hg19_v1_chr10_-_74927767 AK022616	8795	-	BC000721 D88208 TSC_hg19_v1_chr10_-_74927827 AK315711 AK225519 NM_001135752 NM_001135753 NM_007265	8847	-	NM_015901|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC031224|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK303235|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK300980|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK309755|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK316538|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC046173|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC038833|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##NM_000917|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001017962|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001142595|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001142596|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##M24486|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##M24487|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##AK312593|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##AK222960|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##BC034998|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##BC103720|ECD|11319|ecdysoneless homolog (Drosophila)##AK022616|ECD|11319|ecdysoneless homolog (Drosophila)##BC000721|ECD|11319|ecdysoneless homolog (Drosophila)##D88208|ECD|11319|ecdysoneless homolog (Drosophila)##AK315711|ECD|11319|ecdysoneless homolog (Drosophila)##AK225519|ECD|11319|ecdysoneless homolog (Drosophila)##NM_001135752|ECD|11319|ecdysoneless homolog (Drosophila)##NM_001135753|ECD|11319|ecdysoneless homolog (Drosophila)##NM_007265|ECD|11319|ecdysoneless homolog (Drosophila)	0.995672	CTCF.p2:9:0.996
chr2	173729075	173729177	reg1010053.p1	9.795	+	BC040183 NM_001100397 AK311500 AK311697	-42800	+	TSC_hg19_v1_chr2_+_173600637 AB027471 AK313084 BC024004 AB590290 DQ890549 DQ894011	-128454	+	AB209681 TSC_hg19_v1_chr2_+_173600599 U78516	-128526	+	AB208974 TSC_hg19_v1_chr2_+_173940455	211322	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	211420	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	211522	+	BC040183|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##NM_001100397|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311500|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311697|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB027471|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK313084|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##BC024004|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ890549|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ894011|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB209681|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##U78516|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB208974|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK	0.961663	CTCF.p2:8:0.962
chr10	90488300	90488410	reg1010977.p1	9.794	+	AB528790 EF426482 NM_001080518	-4055	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	-64175	+	BC042900 BC031219 NM_001010939	-141842	+	EF426483 NM_001102469	32807	+	EF426484 NM_001128215	74131	+	AX721211 NM_144590	123348	-	EF426482|LIPK|643414|lipase, family member K##NM_001080518|LIPK|643414|lipase, family member K##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##EF426483|LIPN|643418|lipase, family member N##NM_001102469|LIPN|643418|lipase, family member N##EF426484|LIPM|340654|lipase, family member M##NM_001128215|LIPM|340654|lipase, family member M##NM_144590|ANKRD22|118932|ankyrin repeat domain 22	1.565884	CTCF.p2:-34:0.588	CTCF.p2:38:0.967
chr1	207098832	207098956	reg1012373.p2	9.794	+	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	-3607	-	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	-28094	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	-59719	+	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	20867	-	AK298394 NM_001122979 NM_001170631 NM_032029	45062	-	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	107154	-	BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116	0.12092	
chr15	39464382	39464526	reg1014313.p1	9.794	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-475656	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-607523	-	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-718109	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	78471	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	408875	+	AK093308 AX748045 BC045191 NM_152597	610574	-	AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.912022	CTCF.p2:-10:0.912
chr2	194449480	194449613	reg1013697.p1	9.794	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-1389917	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	-1390232	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-1737575	-	BC029413 NM_001127257 CR749813	2072029	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	2072362	+	AB463018 AF327442 AK094515 NM_018897 AB023161	2483949	-	BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7	0.982536	CTCF.p2:-6:0.983
chr9	136608208	136608337	reg1010133.p1	9.794	+	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-3286	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-4794	-	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-106764	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	249174	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	324921	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	325354	-	BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3	0.025259	
chr5	66110384	66110489	reg1011377.p2	9.793	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-218228	+	BC067770 NM_139168	-669774	+	TSC_hg19_v1_chr5_+_65440162 AK308287 BC017000 AK091758 AX747166 BC047322	-670267	+	AY830839 BC018692 NM_015183	14167	+	BC109069 BC109070 D83597 NM_005582 AK313177	382164	-	TSC_hg19_v1_chr5_+_67511583 NM_181523	1401144	+	NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC067770|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_139168|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK308287|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC017000|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK091758|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC047322|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.982809	CTCF.p2:-1:0.983
chr19	5578327	5578473	reg1013221.p1	9.792	+	AK098722 NM_181710 AK292251 BC017592	-122974	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	-237606	-	TSC_hg19_v1_chr19_+_5032899 CU687848	-545501	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	44358	-	TSC_hg19_v1_chr19_-_5622794 NM_014649	44465	-	NM_001201338 NM_001201339 NM_001201340 NM_002967 TSC_hg19_v1_chr19_+_5623093 AK294718	44672	+	AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2##NM_014649|SAFB2|9667|scaffold attachment factor B2##NM_001201338|SAFB|6294|scaffold attachment factor B##NM_001201339|SAFB|6294|scaffold attachment factor B##NM_001201340|SAFB|6294|scaffold attachment factor B##NM_002967|SAFB|6294|scaffold attachment factor B##AK294718|SAFB|6294|scaffold attachment factor B	0.998522	CTCF.p2:15:0.999
chr6	27760193	27760345	reg1005240.p2	9.792	+	TSC_hg19_v1_chr6_-_27440879 BC022992 AK123011 AK312804 NM_007149	-319568	-	TSC_hg19_v1_chr6_+_27356537 NM_001076781 AK092633 AK294965 AX747641 BC132797	-403714	+	AF352327 AF336874 BC107050 NM_032030	-467711	+	EU446971 TSC_hg19_v1_chr6_-_27775708 NM_003519 AK312114 BC093759 BC093761	15454	-	BC112254 BC112256 TSC_hg19_v1_chr6_+_27775950 AK311766 BC062305 NM_003509 HQ258047	15672	+	BC007518 TSC_hg19_v1_chr6_+_27777828 AK311991 NM_003536 EU446975 BC096128 BC096129 BC096130 BC143046 BC148243 BC148250	17513	+	BC022992|ZNF184|7738|zinc finger protein 184##AK123011|ZNF184|7738|zinc finger protein 184##AK312804|ZNF184|7738|zinc finger protein 184##NM_007149|ZNF184|7738|zinc finger protein 184##NM_001076781|ZNF391|346157|zinc finger protein 391##AK092633|ZNF391|346157|zinc finger protein 391##AK294965|ZNF391|346157|zinc finger protein 391##BC132797|ZNF391|346157|zinc finger protein 391##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83##EU446971|HIST1H2BL|8340|histone cluster 1, H2bl##NM_003519|HIST1H2BL|8340|histone cluster 1, H2bl##AK312114|HIST1H2BL|8340|histone cluster 1, H2bl##BC093759|HIST1H2BL|8340|histone cluster 1, H2bl##BC093761|HIST1H2BL|8340|histone cluster 1, H2bl##BC112254|HIST1H2AI|8329|histone cluster 1, H2ai##BC112256|HIST1H2AI|8329|histone cluster 1, H2ai##AK311766|HIST1H2AI|8329|histone cluster 1, H2ai##BC062305|HIST1H3F|8968|histone cluster 1, H3f##NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai##HQ258047|HIST1H2AM|8336|histone cluster 1, H2am##BC007518|HIST1H3H|8357|histone cluster 1, H3h##AK311991|HIST1H3H|8357|histone cluster 1, H3h##NM_003536|HIST1H3H|8357|histone cluster 1, H3h##EU446975|HIST1H3H|8357|histone cluster 1, H3h##BC096128|HIST1H3H|8357|histone cluster 1, H3h##BC096129|HIST1H3H|8357|histone cluster 1, H3h##BC096130|HIST1H3H|8357|histone cluster 1, H3h##BC143046|HIST1H3H|8357|histone cluster 1, H3h##BC148243|HIST1H3H|8357|histone cluster 1, H3h##BC148250|HIST1H3H|8357|histone cluster 1, H3h	0.218689	CTCF.p2:17:0.219
chr11	119015717	119015832	reg1014343.p1	9.791	+	NM_001243259 NM_015517 NM_198971 TSC_hg19_v1_chr11_+_118992297 AK300288 BC017234 AK056362 BC012856 AK301452	-23491	+	TSC_hg19_v1_chr11_+_118978191 BC022219	-37591	+	TSC_hg19_v1_chr11_+_118978097 AB094094 AK025223 NM_014807	-37647	+	BC041091 NM_022169 AK290035	4006	+	AK289830 NM_001142505	4524	+	TSC_hg19_v1_chr11_+_119020572 AJ308237 AJ308238 AJ300465	4850	+	NM_001243259|HINFP|25988|histone H4 transcription factor##NM_015517|HINFP|25988|histone H4 transcription factor##NM_198971|HINFP|25988|histone H4 transcription factor##AK300288|HINFP|25988|histone H4 transcription factor##BC017234|HINFP|25988|histone H4 transcription factor##AK056362|HINFP|25988|histone H4 transcription factor##BC012856|HINFP|25988|histone H4 transcription factor##AK301452|HINFP|25988|histone H4 transcription factor##BC022219|C2CD2L|9854|C2CD2-like##AB094094|C2CD2L|9854|C2CD2-like##AK025223|C2CD2L|9854|C2CD2-like##NM_014807|C2CD2L|9854|C2CD2-like##BC041091|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##NM_022169|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##AK290035|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##AK289830|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##NM_001142505|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##AJ308237|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##AJ308238|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##AJ300465|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4	0.01688	
chr22	26292202	26292331	reg1012874.p1	9.791	+	TSC_hg19_v1_chr22_+_26138168 AY077700	-154082	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	-154146	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-331320	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	273171	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	273231	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	273397	+	AY077700|MYO18B|84700|myosin XVIIIB##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.845014	CTCF.p2:-9:0.845
chr3	116583321	116583457	reg1014444.p1	9.790	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-419016	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-419058	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-1240970	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	2170144	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	2170294	-	AK097667 NM_152538 AK292387	2281508	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.015808	
chr10	32656856	32656992	reg1014323.p1	9.789	+	TSC_hg19_v1_chr10_-_32636137 BC036529 CR749375	-20775	-	TSC_hg19_v1_chr10_-_32636116 AF277374 FJ230887 NM_025209	-20816	-	CU691366 TSC_hg19_v1_chr10_-_32636082 AK092304 AX747467 AK309822	-20962	-	AF286905 AK309309 AK299676 TSC_hg19_v1_chr10_-_32667698	10713	-	TSC_hg19_v1_chr10_+_32735092 NM_001026383 NM_145023 AK057324 BC042672 BC022020	78138	+	AK023093 NM_024688 BC125090 BC125091	199782	+	BC036529|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##CR749375|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AF277374|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##NM_025209|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AK092304|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AK309822|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AF286905|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AK309309|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AK299676|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##NM_001026383|CCDC7|221016|coiled-coil domain containing 7##NM_145023|CCDC7|221016|coiled-coil domain containing 7##AK057324|CCDC7|221016|coiled-coil domain containing 7##BC042672|CCDC7|221016|coiled-coil domain containing 7##BC022020|CCDC7|221016|coiled-coil domain containing 7##AK023093|C10orf68|79741|chromosome 10 open reading frame 68##NM_024688|C10orf68|79741|chromosome 10 open reading frame 68##BC125090|C10orf68|79741|chromosome 10 open reading frame 68##BC125091|C10orf68|79741|chromosome 10 open reading frame 68	0.998851	CTCF.p2:9:0.999
chr15	76443408	76443543	reg1014250.p1	9.789	+	TSC_hg19_v1_chr15_+_76352323 AK056777 AK308676	-91146	+	TSC_hg19_v1_chr15_+_76352281 AK095509 NM_152335	-91186	+	AK311204 TSC_hg19_v1_chr15_-_76352131	-91373	-	BT009796 J04058 TSC_hg19_v1_chr15_-_76603737 AB529049 BC095457	160257	-	TSC_hg19_v1_chr15_-_76603771 AK300044 BC015526 D28380	160290	-	TSC_hg19_v1_chr15_-_76603791 BC029995	160322	-	AK308676|C15orf27|123591|chromosome 15 open reading frame 27##AK095509|C15orf27|123591|chromosome 15 open reading frame 27##NM_152335|C15orf27|123591|chromosome 15 open reading frame 27##AK311204|NRG4|145957|neuregulin 4##BT009796|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##J04058|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC095457|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##AK300044|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC015526|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC029995|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide	0.981173	CTCF.p2:-2:0.981
chr2	227971935	227972057	reg1013775.p1	9.789	+	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	-271266	+	TSC_hg19_v1_chr2_-_227664534 S62539	-307497	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	-308517	-	TSC_hg19_v1_chr2_-_228028922 X81053	56906	-	NM_000092	57278	-	NM_000091 X80031 TSC_hg19_v1_chr2_+_228029337	57314	+	NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1##S62539|IRS1|3667|insulin receptor substrate 1##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##X81053|COL4A4|1286|collagen, type IV, alpha 4##NM_000092|COL4A4|1286|collagen, type IV, alpha 4##NM_000091|COL4A3|1285|collagen, type IV, alpha 3 (Goodpasture antigen)##X80031|COL4A3|1285|collagen, type IV, alpha 3 (Goodpasture antigen)	0.915753	CTCF.p2:8:0.916
chr10	99551871	99551987	reg1013528.p1	9.788	+	BC050435 AF117758 NM_003015	-20196	-	NM_001002261 AL834235	-53663	+	TSC_hg19_v1_chr10_+_99496947 BX647836	-54986	+	BC110810 NM_001010917	58065	+	AK292084 AJ276171 TSC_hg19_v1_chr10_-_99790379	238433	-	AK057190 NM_001206528 NM_018058	238655	-	BC050435|SFRP5|6425|secreted frizzled-related protein 5##AF117758|SFRP5|6425|secreted frizzled-related protein 5##NM_003015|SFRP5|6425|secreted frizzled-related protein 5##NM_001002261|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AL834235|ZFYVE27|118813|zinc finger, FYVE domain containing 27##BX647836|ZFYVE27|118813|zinc finger, FYVE domain containing 27##BC110810|GOLGA7B|401647|golgin A7 family, member B##NM_001010917|GOLGA7B|401647|golgin A7 family, member B##AK292084|CRTAC1|55118|cartilage acidic protein 1##AJ276171|CRTAC1|55118|cartilage acidic protein 1##AK057190|CRTAC1|55118|cartilage acidic protein 1##NM_001206528|CRTAC1|55118|cartilage acidic protein 1##NM_018058|CRTAC1|55118|cartilage acidic protein 1	0.972176	CTCF.p2:-4:0.972
chr1	247650525	247650643	reg1010250.p2	9.788	+	NM_001004492 BC137181 BC137205	-35289	-	AF410477 AF427617 NM_001127462 NM_001243133 NM_004895 NM_183395	-69234	+	AK314998 NM_001079821 NM_001127461 TSC_hg19_v1_chr1_+_247579474 AB208891	-71115	+	BC137203 BC137204 NM_001004698	3785	+	BC030717 NM_198074	46556	-	AK311994 AK123798 BC024174 NM_145278 CU692858	61860	+	NM_001004492|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##BC137181|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##BC137205|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##AF410477|NLRP3|114548|NLR family, pyrin domain containing 3##AF427617|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127462|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001243133|NLRP3|114548|NLR family, pyrin domain containing 3##NM_004895|NLRP3|114548|NLR family, pyrin domain containing 3##NM_183395|NLRP3|114548|NLR family, pyrin domain containing 3##AK314998|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001079821|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127461|NLRP3|114548|NLR family, pyrin domain containing 3##AB208891|NLRP3|114548|NLR family, pyrin domain containing 3##BC137203|OR2W5|441932|olfactory receptor, family 2, subfamily W, member 5##BC137204|OR2W5|441932|olfactory receptor, family 2, subfamily W, member 5##NM_001004698|OR2W5|441932|olfactory receptor, family 2, subfamily W, member 5##BC030717|OR2C3|81472|olfactory receptor, family 2, subfamily C, member 3##NM_198074|OR2C3|81472|olfactory receptor, family 2, subfamily C, member 3##AK311994|C1orf150|148823|chromosome 1 open reading frame 150##AK123798|C1orf150|148823|chromosome 1 open reading frame 150##BC024174|C1orf150|148823|chromosome 1 open reading frame 150##NM_145278|C1orf150|148823|chromosome 1 open reading frame 150	0.7864	CTCF.p2:11:0.786
chr19	3586180	3586334	reg1014965.p1	9.788	+	TSC_hg19_v1_chr19_+_3585541 AB073738 NM_133261 BC117312 BC117314	-696	+	TSC_hg19_v1_chr19_+_3572974 AK314201 AK090733 AK310601 AX746593 AF318366	-13279	+	TSC_hg19_v1_chr19_+_3572954 BC002552 AK289500 BC003505	-13304	+	TSC_hg19_v1_chr19_-_3600582 AY429110 BC121148 BC121149 BC074749 BC074750	14366	-	U27325 TSC_hg19_v1_chr19_-_3606618 U11271	20354	-	TSC_hg19_v1_chr19_-_3606860 BC028027 NM_001060 NM_201636	20598	-	AB073738|GIPC3|126326|GIPC PDZ domain containing family, member 3##NM_133261|GIPC3|126326|GIPC PDZ domain containing family, member 3##BC117312|GIPC3|126326|GIPC PDZ domain containing family, member 3##BC117314|GIPC3|126326|GIPC PDZ domain containing family, member 3##AK314201|HMG20B|10362|high mobility group 20B##AK090733|HMG20B|10362|high mobility group 20B##AK310601|HMG20B|10362|high mobility group 20B##AF318366|HMG20B|10362|high mobility group 20B##BC002552|HMG20B|10362|high mobility group 20B##AK289500|HMG20B|10362|high mobility group 20B##BC003505|HMG20B|10362|high mobility group 20B##AY429110|TBXA2R|6915|thromboxane A2 receptor##BC121148|TBXA2R|6915|thromboxane A2 receptor##BC121149|TBXA2R|6915|thromboxane A2 receptor##BC074749|TBXA2R|6915|thromboxane A2 receptor##BC074750|TBXA2R|6915|thromboxane A2 receptor##U27325|TBXA2R|6915|thromboxane A2 receptor##U11271|TBXA2R|6915|thromboxane A2 receptor##BC028027|TBXA2R|6915|thromboxane A2 receptor##NM_001060|TBXA2R|6915|thromboxane A2 receptor##NM_201636|TBXA2R|6915|thromboxane A2 receptor	1.798164	CTCF.p2:-3:0.956	CTCF.p2:67:0.843
chr8	145693185	145693284	reg1010602.p3	9.788	+	TSC_hg19_v1_chr8_+_145691719 BC017311 NM_145754	-1497	+	TSC_hg19_v1_chr8_-_145690861 BC005073 NM_032687 BC056412 BC065484 NM_001129888	-2351	-	AK094514 NM_138496	-2817	-	AB463647 TSC_hg19_v1_chr8_-_145701232 BC051376 BC065377	7954	-	AF076292 NM_003923	8483	-	AK090471 TSC_hg19_v1_chr8_+_145703480	10227	+	BC017311|KIFC2|90990|kinesin family member C2##NM_145754|KIFC2|90990|kinesin family member C2##BC005073|CYHR1|50626|cysteine/histidine-rich 1##NM_032687|CYHR1|50626|cysteine/histidine-rich 1##BC056412|CYHR1|50626|cysteine/histidine-rich 1##BC065484|CYHR1|50626|cysteine/histidine-rich 1##NM_001129888|CYHR1|50626|cysteine/histidine-rich 1##AK094514|CYHR1|50626|cysteine/histidine-rich 1##NM_138496|CYHR1|50626|cysteine/histidine-rich 1##BC051376|FOXH1|8928|forkhead box H1##BC065377|FOXH1|8928|forkhead box H1##AF076292|FOXH1|8928|forkhead box H1##NM_003923|FOXH1|8928|forkhead box H1##AK090471|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A	1.005503	CTCF.p2:6:0.995
chr9	32379398	32379519	reg1012391.p3	9.788	+	AK056372 NM_152570	-3660156	-	AK057806 JN681271 NM_145005	-4805617	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-4805987	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	5132	+	TSC_hg19_v1_chr9_+_32384622 AK057904	5169	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	5191	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.729021	CTCF.p2:-8:0.729
chr10	62576442	62576580	reg1014364.p1	9.787	+	TSC_hg19_v1_chr10_+_62538253 BC107750 AK291939	-38240	+	NM_001170406 AK295741 NM_001170407 NM_001786 NM_033379 X05360 Y00272 TSC_hg19_v1_chr10_+_62538235	-38348	+	TSC_hg19_v1_chr10_-_62493282 NM_001204403	-83227	-	BC041791 AB018283 BC032848 TSC_hg19_v1_chr10_-_62704033 NM_001242359 NM_014836 AK307630	127441	-	AK075129 BC093035 TSC_hg19_v1_chr10_-_62761269	184729	-	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	636448	-	BC107750|CDK1|983|cyclin-dependent kinase 1##AK291939|CDK1|983|cyclin-dependent kinase 1##NM_001170406|CDK1|983|cyclin-dependent kinase 1##AK295741|CDK1|983|cyclin-dependent kinase 1##NM_001170407|CDK1|983|cyclin-dependent kinase 1##NM_001786|CDK1|983|cyclin-dependent kinase 1##NM_033379|CDK1|983|cyclin-dependent kinase 1##X05360|CDK1|983|cyclin-dependent kinase 1##Y00272|CDK1|983|cyclin-dependent kinase 1##NM_001204403|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BC041791|RHOBTB1|9886|Rho-related BTB domain containing 1##AB018283|RHOBTB1|9886|Rho-related BTB domain containing 1##BC032848|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_001242359|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_014836|RHOBTB1|9886|Rho-related BTB domain containing 1##AK307630|RHOBTB1|9886|Rho-related BTB domain containing 1##AK075129|RHOBTB1|9886|Rho-related BTB domain containing 1##BC093035|RHOBTB1|9886|Rho-related BTB domain containing 1##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26	0.993814	CTCF.p2:-16:0.994
chr12	41016171	41016304	reg1012276.p1	9.787	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	-397378	+	TSC_hg19_v1_chr12_-_40499870 BC047507	-516365	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	-516548	-	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	70045	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	565971	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	815350	+	NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4	0.999837	CTCF.p2:4:1.000
chr7	138134475	138134589	reg1013291.p1	9.787	+	AK298421 NM_001190906 NM_001190907 NM_005989 Z28339 AK298428 BC130625 BC130627 AK289425 HQ258384	-373314	+	TSC_hg19_v1_chr7_-_137686833 NM_001253775 NM_194071	-447680	-	AK131517 TSC_hg19_v1_chr7_-_137686812	-447720	-	TSC_hg19_v1_chr7_+_138145003 AK312610 AK075306 NM_003852 NM_015905 AK302679	10460	+	AF119042 BC028689 TSC_hg19_v1_chr7_+_138145183 AB528587 AF009353	10704	+	BC036796 NM_174959	214436	-	AK298421|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190906|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190907|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_005989|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##Z28339|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK298428|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130625|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130627|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK289425|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##HQ258384|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001253775|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_194071|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK131517|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK312610|TRIM24|8805|tripartite motif containing 24##AK075306|TRIM24|8805|tripartite motif containing 24##NM_003852|TRIM24|8805|tripartite motif containing 24##NM_015905|TRIM24|8805|tripartite motif containing 24##AK302679|TRIM24|8805|tripartite motif containing 24##AF119042|TRIM24|8805|tripartite motif containing 24##BC028689|TRIM24|8805|tripartite motif containing 24##AF009353|TRIM24|8805|tripartite motif containing 24##BC036796|SVOPL|136306|SVOP-like##NM_174959|SVOPL|136306|SVOP-like	0.996141	CTCF.p2:-2:0.996
chr19	32715631	32715750	reg1010966.p1	9.786	+	FJ211597 NM_001205273	-632504	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	-875343	-	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	-1852310	+	TSC_hg19_v1_chr19_+_32836524 NM_001136156 NM_014910 AK292526 AB029007 BX640881 BC136417 AL713775	120872	+	TSC_hg19_v1_chr19_-_32896476 BC000922	180802	-	TSC_hg19_v1_chr19_+_32896675 NM_001172774 AK129497 AF533711 BC029162	180923	+	FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##NM_001136156|ZNF507|22847|zinc finger protein 507##NM_014910|ZNF507|22847|zinc finger protein 507##AK292526|ZNF507|22847|zinc finger protein 507##AB029007|ZNF507|22847|zinc finger protein 507##BX640881|ZNF507|22847|zinc finger protein 507##BC136417|ZNF507|22847|zinc finger protein 507##AL713775|ZNF507|22847|zinc finger protein 507##BC000922|LOC400684|400684|uncharacterized LOC400684##NM_001172774|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AK129497|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AF533711|DPY19L3|147991|dpy-19-like 3 (C. elegans)##BC029162|DPY19L3|147991|dpy-19-like 3 (C. elegans)	0.721708	CTCF.p2:12:0.629
chr12	5008677	5008809	reg1012114.p1	9.785	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	-90328	+	AJ271385 NM_017417 BC140888 BC140889	-178975	+	TSC_hg19_v1_chr12_+_4758272 NM_005002 BC015837 AF050641 AK308588 BC009311 AK291067 BC111546 L04490	-250465	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	10317	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	144376	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	532533	+	NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_005002|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC015837|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AF050641|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK308588|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC009311|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK291067|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC111546|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##L04490|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3	0.145646	
chr10	89061370	89061503	reg1013597.p1	9.784	+	BC092519 NM_001099338 AB095940	-76206	+	TSC_hg19_v1_chr10_+_88854962 AK022978 NM_019054	-206503	+	TSC_hg19_v1_chr10_-_88854695 NM_005271	-206676	-	TSC_hg19_v1_chr10_-_89102098 AK091716	40660	-	TSC_hg19_v1_chr10_-_89102128 AK309777 AK311174	40705	-	TSC_hg19_v1_chr10_-_89102214 BC047063	40822	-	BC092519|FAM22A|728118|family with sequence similarity 22, member A##NM_001099338|FAM22A|728118|family with sequence similarity 22, member A##AB095940|FAM22D|728130|family with sequence similarity 22, member D##AK022978|FAM35A|54537|family with sequence similarity 35, member A##NM_019054|FAM35A|54537|family with sequence similarity 35, member A##NM_005271|GLUD1|2746|glutamate dehydrogenase 1##AK309777|LOC728190|728190|uncharacterized LOC728190##AK311174|LOC728190|728190|uncharacterized LOC728190##BC047063|LOC728190|728190|uncharacterized LOC728190	0.990254	CTCF.p2:2:0.990
chr1	20848941	20849050	reg1011059.p1	9.784	+	TSC_hg19_v1_chr1_-_20834623 AB097015 AL833889 AK293430 AK303820 AK022937 NM_024544	-14354	-	EU935008 AB528298 AM393331 AM393690 TSC_hg19_v1_chr1_-_20834605 BC014010 BC010101	-14435	-	NM_018584 TSC_hg19_v1_chr1_-_20812743	-36214	-	AK126900 NM_207334 TSC_hg19_v1_chr1_+_20879013 BC142686	29991	+	BC048284 NM_001785 AY634312 BC054036 TSC_hg19_v1_chr1_+_20915592 AJ000474 CU691080 S52873	66537	+	TSC_hg19_v1_chr1_+_20959970 AB053323 NM_032409 AF316873 BC028215 DQ891033 DQ893330 DQ894212 DQ896646 AB384405	111002	+	AB097015|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AL833889|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK293430|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK303820|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK022937|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##NM_024544|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##EU935008|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AM393331|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AM393690|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC014010|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC010101|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##NM_018584|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##AK126900|FAM43B|163933|family with sequence similarity 43, member B##NM_207334|FAM43B|163933|family with sequence similarity 43, member B##BC142686|FAM43B|163933|family with sequence similarity 43, member B##BC048284|CDA|978|cytidine deaminase##NM_001785|CDA|978|cytidine deaminase##AY634312|CDA|978|cytidine deaminase##BC054036|CDA|978|cytidine deaminase##AJ000474|CDA|978|cytidine deaminase##S52873|CDA|978|cytidine deaminase##AB053323|PINK1|65018|PTEN induced putative kinase 1##NM_032409|PINK1|65018|PTEN induced putative kinase 1##AF316873|PINK1|65018|PTEN induced putative kinase 1##BC028215|PINK1|65018|PTEN induced putative kinase 1##DQ891033|PINK1|65018|PTEN induced putative kinase 1##DQ893330|PINK1|65018|PTEN induced putative kinase 1##DQ894212|PINK1|65018|PTEN induced putative kinase 1##DQ896646|PINK1|65018|PTEN induced putative kinase 1	0.97497	CTCF.p2:6:0.975
chr20	31482058	31482162	reg1012862.p1	9.784	+	TSC_hg19_v1_chr20_+_31407780 AK312590 BC128442	-74314	+	TSC_hg19_v1_chr20_+_31407759 NM_012325 AK297273 BC106068 U24166 BC109281 BC040410	-74375	+	TSC_hg19_v1_chr20_+_31367638 AF176228 NM_175850	-114463	+	BC029528 AF401350 BC026118 NM_080675	110124	-	TSC_hg19_v1_chr20_+_31595393 AK172819 AK027068 NM_025227	113291	+	TSC_hg19_v1_chr20_+_31595480 AY358723 AK304064	113371	+	AK312590|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC128442|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##NM_012325|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##AK297273|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC106068|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##U24166|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC109281|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC040410|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##BC029528|SUN5|140732|Sad1 and UNC84 domain containing 5##AF401350|SUN5|140732|Sad1 and UNC84 domain containing 5##BC026118|SUN5|140732|Sad1 and UNC84 domain containing 5##NM_080675|SUN5|140732|Sad1 and UNC84 domain containing 5##AK172819|BPIFB2|80341|BPI fold containing family B, member 2##AK027068|BPIFB2|80341|BPI fold containing family B, member 2##NM_025227|BPIFB2|80341|BPI fold containing family B, member 2##AY358723|BPIFB2|80341|BPI fold containing family B, member 2##AK304064|BPIFB2|80341|BPI fold containing family B, member 2	0.892549	CTCF.p2:9:0.893
chr3	28958270	28958402	reg1012064.p1	9.783	+	NM_001040432	-526350	+	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	-567775	-	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	-567954	-	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	364628	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	1689686	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	1690067	+	NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2##NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	0.0	
chr17	14829982	14830102	reg1013194.p1	9.782	+	TSC_hg19_v1_chr17_+_14204397 AK023723 BC063301 AF105377 NM_006041 BC069664 BC069725	-625597	+	NM_001007530 BC146859 BC071823	-689879	-	TSC_hg19_v1_chr17_+_13972841 BC000060 BC006394 U09466 AK294213 AK295925 BT006985 CU674016 DQ893604 DQ895073	-857161	+	CR541931 CR541953 M94048 NM_153322 S61788 TSC_hg19_v1_chr17_-_15164113	334038	-	AK300690 L03203 TSC_hg19_v1_chr17_-_15165834	335777	-	AK290640 TSC_hg19_v1_chr17_-_15165870 BC019040	335823	-	AK023723|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC063301|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##AF105377|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##NM_006041|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC069664|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC069725|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##NM_001007530|CDRT15|146822|CMT1A duplicated region transcript 15##BC146859|CDRT15|146822|CMT1A duplicated region transcript 15##BC071823|CDRT15|146822|CMT1A duplicated region transcript 15##BC000060|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##BC006394|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##U09466|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK294213|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK295925|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##BT006985|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##DQ893604|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##DQ895073|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##CR541931|PMP22|5376|peripheral myelin protein 22##CR541953|PMP22|5376|peripheral myelin protein 22##M94048|PMP22|5376|peripheral myelin protein 22##NM_153322|PMP22|5376|peripheral myelin protein 22##S61788|PMP22|5376|peripheral myelin protein 22##AK300690|PMP22|5376|peripheral myelin protein 22##L03203|PMP22|5376|peripheral myelin protein 22##AK290640|PMP22|5376|peripheral myelin protein 22##BC019040|PMP22|5376|peripheral myelin protein 22	0.985471	CTCF.p2:4:0.985
chr7	91459487	91459596	reg1012322.p1	9.782	+	TSC_hg19_v1_chr7_+_90893747 AB017363 NM_003505 AF072872 BC051271 AK314996	-565665	+	BC017719 TSC_hg19_v1_chr7_+_90893724	-565840	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	-1120381	+	TSC_hg19_v1_chr7_-_91509979 BC108648 AL832861 AK298469 AK313641 NM_006980 Y09615 AK222730 AK311568	50474	-	TSC_hg19_v1_chr7_+_91570181 NM_005751 NM_147185 AJ131693 AF026245 BC015533 AB019691 AY803272 CU677341	110740	+	AB590319 CU689330 DQ891311 DQ894495 TSC_hg19_v1_chr7_-_91763765 D55653 BC018429	304181	-	AB017363|FZD1|8321|frizzled family receptor 1##NM_003505|FZD1|8321|frizzled family receptor 1##AF072872|FZD1|8321|frizzled family receptor 1##BC051271|FZD1|8321|frizzled family receptor 1##AK314996|FZD1|8321|frizzled family receptor 1##BC017719|FZD1|8321|frizzled family receptor 1##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14##BC108648|MTERF|7978|mitochondrial transcription termination factor##AL832861|MTERF|7978|mitochondrial transcription termination factor##AK298469|MTERF|7978|mitochondrial transcription termination factor##AK313641|MTERF|7978|mitochondrial transcription termination factor##NM_006980|MTERF|7978|mitochondrial transcription termination factor##Y09615|MTERF|7978|mitochondrial transcription termination factor##AK222730|MTERF|7978|mitochondrial transcription termination factor##NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##DQ891311|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##DQ894495|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##D55653|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##BC018429|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1	0.99853	CTCF.p2:-14:0.999
chr22	24113274	24113377	reg1011167.p1	9.781	+	TSC_hg19_v1_chr22_-_24110129 BC053570 AK289560 BC065232 NM_213720	-3213	-	AK093880 AX748349 NM_182520	-8118	+	CU013206 CU013494 DQ893106 DQ896379 CR456610 AK312098 AF163825 AY359000 NM_013378 BC020666	-16723	-	AK075448 AK129792 NM_005940 X57766 BC057788	1720	+	TSC_hg19_v1_chr22_+_24129164 AK024025 NM_001007468 NM_003073 AK303620 AK021419 AK299411 AJ011737 AJ011738 U04847 BC117114 BC143667 CR456581 AL389878 AB463295 CU013180 CU013468 HQ258224 AB017523	15924	+	AB528119 CU013077 CU013365 CU691264 TSC_hg19_v1_chr22_-_24181194 AK096976 AK125830 BC057830 CR456372 AL389876 NM_001002862 NM_001135751 NM_198440	67860	-	BC053570|CHCHD10|400916|coiled-coil-helix-coiled-coil-helix domain containing 10##AK289560|CHCHD10|400916|coiled-coil-helix-coiled-coil-helix domain containing 10##BC065232|CHCHD10|400916|coiled-coil-helix-coiled-coil-helix domain containing 10##NM_213720|CHCHD10|400916|coiled-coil-helix-coiled-coil-helix domain containing 10##AK093880|C22orf15|150248|chromosome 22 open reading frame 15##NM_182520|C22orf15|150248|chromosome 22 open reading frame 15##CU013206|VPREB3|29802|pre-B lymphocyte 3##CU013494|VPREB3|29802|pre-B lymphocyte 3##DQ893106|VPREB3|29802|pre-B lymphocyte 3##DQ896379|VPREB3|29802|pre-B lymphocyte 3##CR456610|VPREB3|29802|pre-B lymphocyte 3##AK312098|VPREB3|29802|pre-B lymphocyte 3##AF163825|VPREB3|29802|pre-B lymphocyte 3##AY359000|VPREB3|29802|pre-B lymphocyte 3##NM_013378|VPREB3|29802|pre-B lymphocyte 3##BC020666|VPREB3|29802|pre-B lymphocyte 3##AK075448|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##AK129792|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##NM_005940|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##X57766|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##BC057788|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##AK024025|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##NM_001007468|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##NM_003073|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK303620|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK021419|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK299411|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AJ011737|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AJ011738|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##BC117114|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##BC143667|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CR456581|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AL389878|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CU013180|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CU013468|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##HQ258224|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AB017523|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CU013077|DERL3|91319|Der1-like domain family, member 3##CU013365|DERL3|91319|Der1-like domain family, member 3##AK096976|DERL3|91319|Der1-like domain family, member 3##AK125830|DERL3|91319|Der1-like domain family, member 3##BC057830|DERL3|91319|Der1-like domain family, member 3##CR456372|DERL3|91319|Der1-like domain family, member 3##AL389876|DERL3|91319|Der1-like domain family, member 3##NM_001002862|DERL3|91319|Der1-like domain family, member 3##NM_001135751|DERL3|91319|Der1-like domain family, member 3##NM_198440|DERL3|91319|Der1-like domain family, member 3	0.0	
chr3	49378107	49378237	reg1011091.p3	9.781	+	TSC_hg19_v1_chr3_-_49377520 NM_001251877 NM_003363 NM_199443	-644	-	TSC_hg19_v1_chr3_-_49377487 BC125131 BC125130	-673	-	TSC_hg19_v1_chr3_-_49377482 AK291795	-692	-	TSC_hg19_v1_chr3_-_49395733 X13709 X13710 AK225835 BC007865 BC070258 BC000742	17543	-	M21304 TSC_hg19_v1_chr3_-_49395760 AK130160 D28370 NM_000581 NM_201397	17598	-	TSC_hg19_v1_chr3_-_49399989 BC000946	21842	-	NM_001251877|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##NM_003363|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##NM_199443|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##BC125131|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##BC125130|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##AK291795|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##X13709|GPX1|2876|glutathione peroxidase 1##X13710|GPX1|2876|glutathione peroxidase 1##AK225835|GPX1|2876|glutathione peroxidase 1##BC007865|GPX1|2876|glutathione peroxidase 1##BC070258|GPX1|2876|glutathione peroxidase 1##BC000742|GPX1|2876|glutathione peroxidase 1##M21304|GPX1|2876|glutathione peroxidase 1##AK130160|GPX1|2876|glutathione peroxidase 1##NM_000581|GPX1|2876|glutathione peroxidase 1##NM_201397|GPX1|2876|glutathione peroxidase 1##BC000946|RHOA|387|ras homolog gene family, member A	0.0	
chr7	90379258	90379378	reg1013384.p1	9.781	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	-40158	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	-40535	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	-153509	+	BC017719 TSC_hg19_v1_chr7_+_90893724	514383	+	TSC_hg19_v1_chr7_+_90893747 AB017363 NM_003505 AF072872 BC051271 AK314996	514558	+	TSC_hg19_v1_chr7_-_91509979 BC108648 AL832861 AK298469 AK313641 NM_006980 Y09615 AK222730 AK311568	1130697	-	AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##BC017719|FZD1|8321|frizzled family receptor 1##AB017363|FZD1|8321|frizzled family receptor 1##NM_003505|FZD1|8321|frizzled family receptor 1##AF072872|FZD1|8321|frizzled family receptor 1##BC051271|FZD1|8321|frizzled family receptor 1##AK314996|FZD1|8321|frizzled family receptor 1##BC108648|MTERF|7978|mitochondrial transcription termination factor##AL832861|MTERF|7978|mitochondrial transcription termination factor##AK298469|MTERF|7978|mitochondrial transcription termination factor##AK313641|MTERF|7978|mitochondrial transcription termination factor##NM_006980|MTERF|7978|mitochondrial transcription termination factor##Y09615|MTERF|7978|mitochondrial transcription termination factor##AK222730|MTERF|7978|mitochondrial transcription termination factor	0.987605	CTCF.p2:4:0.988
chr17	34131856	34131982	reg1008792.p1	9.780	+	AF219624 BC011774 AY358987 TSC_hg19_v1_chr17_-_34122596 BC002631 AF330002 NM_001032278 NM_024302 AK122604	-9291	-	NM_145272 BC021727 AB528807 AY557347	-43982	+	AF508784 AF508785 NM_139285	-52023	-	TSC_hg19_v1_chr17_+_34136487 BC048985 AK304520 AK307637 AK314194 BC030591 NM_003487 NM_139215 U51334 AK313223 BC046099 X98893	4590	+	BC039129 TSC_hg19_v1_chr17_+_34171892	39868	+	HQ258319 BC132681 BC144011 BC033734 AK301943 AK301884 AK057392 AK301774 NM_152781	63900	-	AF219624|MMP28|79148|matrix metallopeptidase 28##BC011774|MMP28|79148|matrix metallopeptidase 28##AY358987|MMP28|79148|matrix metallopeptidase 28##BC002631|MMP28|79148|matrix metallopeptidase 28##AF330002|MMP28|79148|matrix metallopeptidase 28##NM_001032278|MMP28|79148|matrix metallopeptidase 28##NM_024302|MMP28|79148|matrix metallopeptidase 28##AK122604|MMP28|79148|matrix metallopeptidase 28##NM_145272|C17orf50|146853|chromosome 17 open reading frame 50##BC021727|C17orf50|146853|chromosome 17 open reading frame 50##AY557347|C17orf50|146853|chromosome 17 open reading frame 50##AF508784|GAS2L2|246176|growth arrest-specific 2 like 2##AF508785|GAS2L2|246176|growth arrest-specific 2 like 2##NM_139285|GAS2L2|246176|growth arrest-specific 2 like 2##BC048985|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK304520|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK307637|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK314194|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##BC030591|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##NM_003487|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##NM_139215|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##U51334|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK313223|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##BC046099|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##X98893|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##BC039129|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##HQ258319|C17orf66|256957|chromosome 17 open reading frame 66##BC132681|C17orf66|256957|chromosome 17 open reading frame 66##BC144011|C17orf66|256957|chromosome 17 open reading frame 66##BC033734|C17orf66|256957|chromosome 17 open reading frame 66##AK301943|C17orf66|256957|chromosome 17 open reading frame 66##AK301884|C17orf66|256957|chromosome 17 open reading frame 66##AK057392|C17orf66|256957|chromosome 17 open reading frame 66##AK301774|C17orf66|256957|chromosome 17 open reading frame 66##NM_152781|C17orf66|256957|chromosome 17 open reading frame 66	0.79368	CTCF.p2:-43:0.689
chr4	108658263	108658397	reg1009553.p1	9.780	+	BC011392 AF016496 CR457028 CU690750 BC040940 TSC_hg19_v1_chr4_-_108641372 BC050627 AF033026 AK292774 AK297981 Y10387 BC032513 AF105227 NM_005443	-16966	-	NM_014421 AF177395	-700878	-	NM_001195138	-1369739	-	AK290344 NM_001136258 AF452717	87437	+	NM_001136257 NM_152621 BC028705 AK314049 BC041369	156094	+	TSC_hg19_v1_chr4_+_108852714 AK304724 AK290002 NM_183075 BC012027 BC132767 BC136483 BC144148 AY343323 AK303284 HQ258621	194403	+	BC011392|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF016496|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##CR457028|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC040940|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC050627|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF033026|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK292774|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK297981|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##Y10387|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC032513|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF105227|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##NM_005443|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##NM_014421|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##AF177395|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like##AK290344|SGMS2|166929|sphingomyelin synthase 2##NM_001136258|SGMS2|166929|sphingomyelin synthase 2##AF452717|SGMS2|166929|sphingomyelin synthase 2##NM_001136257|SGMS2|166929|sphingomyelin synthase 2##NM_152621|SGMS2|166929|sphingomyelin synthase 2##BC028705|SGMS2|166929|sphingomyelin synthase 2##AK314049|SGMS2|166929|sphingomyelin synthase 2##BC041369|SGMS2|166929|sphingomyelin synthase 2##AK304724|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##AK290002|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##NM_183075|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##BC012027|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##BC132767|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##BC136483|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##BC144148|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##AY343323|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##AK303284|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##HQ258621|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1	0.998068	CTCF.p2:13:0.998
chr8	22722407	22722562	reg1012162.p1	9.780	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-171700	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-171979	-	AK294968 AK295834 NM_001199881	-172410	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	62840	-	AK092617 BC034917 NM_001160036	122439	+	NM_001160037	130876	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.999362	CTCF.p2:-2:0.999
chr12	130531998	130532112	reg1012555.p1	9.779	+	BC114626 BC114936 NM_133448 AB061814	-143844	-	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	-1193968	+	BC043528 TSC_hg19_v1_chr12_+_129337985	-1194071	+	AK056047 TSC_hg19_v1_chr12_-_130646911	114801	-	TSC_hg19_v1_chr12_+_130647008 BC070037 NM_007197	114955	+	NM_001190971 NM_004764	290377	+	BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056047|FLJ31485|440119|uncharacterized LOC440119##BC070037|FZD10|11211|frizzled family receptor 10##NM_007197|FZD10|11211|frizzled family receptor 10##NM_001190971|PIWIL1|9271|piwi-like 1 (Drosophila)##NM_004764|PIWIL1|9271|piwi-like 1 (Drosophila)	0.941033	CTCF.p2:-28:0.941
chr3	96050328	96050462	reg1015564.p1	9.779	+	AK122674 NM_001195643	-2268329	-	TSC_hg19_v1_chr3_+_93781863 AF169972 BC018432 BC020602 BC057238 NM_022072 AK026262	-2268551	+	BC045541 TSC_hg19_v1_chr3_-_93781761 AL832912 BC063379 NM_176815	-2268651	-	NM_001080448 TSC_hg19_v1_chr3_+_96533435 AK092565 AX747601	483035	+	AK302040 AK310249 BC031881 BC067287 AK302080 AL133666 NM_173655	1108076	+	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	1433205	+	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1##AF169972|NSUN3|63899|NOP2/Sun domain family, member 3##BC018432|NSUN3|63899|NOP2/Sun domain family, member 3##BC020602|NSUN3|63899|NOP2/Sun domain family, member 3##BC057238|NSUN3|63899|NOP2/Sun domain family, member 3##NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3##AK026262|NSUN3|63899|NOP2/Sun domain family, member 3##BC045541|DHFRL1|200895|dihydrofolate reductase-like 1##AL832912|DHFRL1|200895|dihydrofolate reductase-like 1##BC063379|DHFRL1|200895|dihydrofolate reductase-like 1##NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001080448|EPHA6|285220|EPH receptor A6##AK092565|EPHA6|285220|EPH receptor A6##AK302040|EPHA6|285220|EPH receptor A6##AK310249|EPHA6|285220|EPH receptor A6##BC031881|EPHA6|285220|EPH receptor A6##BC067287|EPHA6|285220|EPH receptor A6##AK302080|EPHA6|285220|EPH receptor A6##AL133666|EPHA6|285220|EPH receptor A6##NM_173655|EPHA6|285220|EPH receptor A6##BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6	0.538292	CTCF.p2:-16:0.538
chr7	97128672	97128790	reg1013974.p1	9.779	+	TSC_hg19_v1_chr7_+_96747012 BC022858 AF201933 BC020621	-381701	+	BC028409 NM_020186	-382827	+	BC006226 TSC_hg19_v1_chr7_-_96654144 AK023493 NM_005221 AK297614	-474537	-	NM_003182 NM_013996 NM_013997 NM_013998 U37529 AK222957 BC018047 X54469	232621	+	AK302242 AK000379 NM_001178077 NM_133436	372719	-	BC008723 TSC_hg19_v1_chr7_-_97501721 BC014621	372973	-	BC022858|ACN9|57001|ACN9 homolog (S. cerevisiae)##AF201933|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC020621|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC006226|DLX5|1749|distal-less homeobox 5##AK023493|DLX5|1749|distal-less homeobox 5##NM_005221|DLX5|1749|distal-less homeobox 5##AK297614|DLX5|1749|distal-less homeobox 5##NM_003182|TAC1|6863|tachykinin, precursor 1##NM_013996|TAC1|6863|tachykinin, precursor 1##NM_013997|TAC1|6863|tachykinin, precursor 1##NM_013998|TAC1|6863|tachykinin, precursor 1##U37529|TAC1|6863|tachykinin, precursor 1##AK222957|TAC1|6863|tachykinin, precursor 1##BC018047|TAC1|6863|tachykinin, precursor 1##X54469|TAC1|6863|tachykinin, precursor 1##AK302242|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK000379|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178077|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_133436|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC008723|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC014621|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)	0.022253	
chr2	174314044	174314153	reg1011477.p1	9.778	+	TSC_hg19_v1_chr2_+_174219599 AY029179 NM_031942 NM_145810 AK027642 AK027628 BC027966 AK075134 AK297097 AK300949 AK297245 AL834186 CU693352 AB527763	-94485	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	-373450	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	-373552	+	AK023489 TSC_hg19_v1_chr2_-_174767427	453256	-	X68560 TSC_hg19_v1_chr2_-_174828559 M97191	514449	-	TSC_hg19_v1_chr2_-_174828899 AY070137 NM_001017371	514774	-	AY029179|CDCA7|83879|cell division cycle associated 7##NM_031942|CDCA7|83879|cell division cycle associated 7##NM_145810|CDCA7|83879|cell division cycle associated 7##AK027642|CDCA7|83879|cell division cycle associated 7##AK027628|CDCA7|83879|cell division cycle associated 7##BC027966|CDCA7|83879|cell division cycle associated 7##AK075134|CDCA7|83879|cell division cycle associated 7##AK297097|CDCA7|83879|cell division cycle associated 7##AK300949|CDCA7|83879|cell division cycle associated 7##AK297245|CDCA7|83879|cell division cycle associated 7##AL834186|CDCA7|83879|cell division cycle associated 7##AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##X68560|SP3|6670|Sp3 transcription factor##M97191|SP3|6670|Sp3 transcription factor##AY070137|SP3|6670|Sp3 transcription factor##NM_001017371|SP3|6670|Sp3 transcription factor	0.550281	CTCF.p2:9:0.550
chr5	43389958	43390093	reg1012741.p1	9.778	+	TSC_hg19_v1_chr5_-_43313581 NM_001098272 NM_002130	-76429	-	BC000297 BC082234 M15802 X66435 TSC_hg19_v1_chr5_-_43313515 AK095492 AK315593	-76494	-	BC036422 NM_153361	-197699	+	TSC_hg19_v1_chr5_-_43397231 AK307307	7201	-	AB590493 AF220210 CU686894 HM067700 BC062668 BC069532 AF266504 AF110384 AK312120 NM_148672	22427	-	BC013351 BC063832 AK094078 TSC_hg19_v1_chr5_-_43483947 AK025310 AK225220 NM_022483 AK315466	93939	-	NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##M15802|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##BC036422|NIM1|167359|serine/threonine-protein kinase NIM1##NM_153361|NIM1|167359|serine/threonine-protein kinase NIM1##AK307307|CCL28|56477|chemokine (C-C motif) ligand 28##AF220210|CCL28|56477|chemokine (C-C motif) ligand 28##HM067700|CCL28|56477|chemokine (C-C motif) ligand 28##BC062668|CCL28|56477|chemokine (C-C motif) ligand 28##BC069532|CCL28|56477|chemokine (C-C motif) ligand 28##AF266504|CCL28|56477|chemokine (C-C motif) ligand 28##AF110384|CCL28|56477|chemokine (C-C motif) ligand 28##AK312120|CCL28|56477|chemokine (C-C motif) ligand 28##NM_148672|CCL28|56477|chemokine (C-C motif) ligand 28##BC013351|C5orf28|64417|chromosome 5 open reading frame 28##BC063832|C5orf28|64417|chromosome 5 open reading frame 28##AK025310|C5orf28|64417|chromosome 5 open reading frame 28##AK225220|C5orf28|64417|chromosome 5 open reading frame 28##NM_022483|C5orf28|64417|chromosome 5 open reading frame 28##AK315466|C5orf28|64417|chromosome 5 open reading frame 28	1.579191	CTCF.p2:29:0.810	CTCF.p2:-102:0.769
chr1	119818162	119818294	reg1014458.p1	9.777	+	TSC_hg19_v1_chr1_-_119683274 BC021722 CU692202 BC039889 AK223197 AJ242739 AK296799 BC044575 AK313740 AK300295 NM_015836 NM_201263	-134959	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	-135202	+	AK127536 NM_152380	-286050	-	TSC_hg19_v1_chr1_+_119911431 AK298289 NM_001005783 NM_016527 BC020863 AF231917 AF203975 AY513277	93216	+	NM_001166120	139325	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	139533	+	BC021722|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC039889|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK223197|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AJ242739|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK296799|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC044575|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK313740|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK300295|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_015836|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_201263|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15##AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)##BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2	0.969635	CTCF.p2:-7:0.970
chr19	36083268	36083407	reg1012085.p1	9.777	+	AK058032 AK223259 NM_000704	-28778	-	TSC_hg19_v1_chr19_-_36036923 CR627053	-46429	-	TSC_hg19_v1_chr19_+_36036553 NM_001242597 NM_001242598 NM_032635 Y18007 BC001118 CU674562	-46793	+	TSC_hg19_v1_chr19_+_36103655 BC064390 NM_015302 BC171905 BC157882 AK307703 AB020648 BC013947	20334	+	TSC_hg19_v1_chr19_+_36119937 BC031682	36605	+	TSC_hg19_v1_chr19_+_36119959 BC002868 BC004204 NM_024321 AK301669 AB384666 CU678262	36669	+	AK058032|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##AK223259|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##NM_000704|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##CR627053|LOC100506469|100506469|uncharacterized LOC100506469##NM_001242597|TMEM147|10430|transmembrane protein 147##NM_001242598|TMEM147|10430|transmembrane protein 147##NM_032635|TMEM147|10430|transmembrane protein 147##Y18007|TMEM147|10430|transmembrane protein 147##BC001118|TMEM147|10430|transmembrane protein 147##BC064390|HAUS5|23354|HAUS augmin-like complex, subunit 5##NM_015302|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC171905|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC157882|HAUS5|23354|HAUS augmin-like complex, subunit 5##AK307703|HAUS5|23354|HAUS augmin-like complex, subunit 5##AB020648|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC013947|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC031682|RBM42|79171|RNA binding motif protein 42##BC002868|RBM42|79171|RNA binding motif protein 42##BC004204|RBM42|79171|RNA binding motif protein 42##NM_024321|RBM42|79171|RNA binding motif protein 42##AK301669|RBM42|79171|RNA binding motif protein 42	0.0	
chr12	94495273	94495408	reg1011346.p1	9.776	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-424157	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-529739	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-530520	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	47164	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	358191	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	358302	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.946512	CTCF.p2:4:0.947
chr15	70752629	70752756	reg1012025.p1	9.776	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-362449	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-362465	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-410783	-	TSC_hg19_v1_chr15_-_70878946 BC040579	126252	-	BC016881 AL834243 NM_001008224 AK055435	241935	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	303150	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.999841	CTCF.p2:23:1.000
chr4	119963246	119963360	reg1012390.p1	9.776	+	TSC_hg19_v1_chr4_+_119948562 AK296962	-14741	+	AJ010482 TSC_hg19_v1_chr4_+_119948327	-14979	+	FN422000 TSC_hg19_v1_chr4_+_119948273	-15030	+	NM_016599 AJ252149 AK313856 AY013295 BC017402 BC020932 BC005195	93699	+	TSC_hg19_v1_chr4_+_120133742 BX648836	170440	+	TSC_hg19_v1_chr4_+_120133867 BC062741 NM_019050 CR749490	170537	+	AK296962|SYNPO2|171024|synaptopodin 2##AJ010482|SYNPO2|171024|synaptopodin 2##FN422000|SYNPO2|171024|synaptopodin 2##NM_016599|MYOZ2|51778|myozenin 2##AJ252149|MYOZ2|51778|myozenin 2##AK313856|MYOZ2|51778|myozenin 2##AY013295|MYOZ2|51778|myozenin 2##BC017402|MYOZ2|51778|myozenin 2##BC020932|MYOZ2|51778|myozenin 2##BC005195|MYOZ2|51778|myozenin 2##BC062741|USP53|54532|ubiquitin specific peptidase 53##NM_019050|USP53|54532|ubiquitin specific peptidase 53##CR749490|USP53|54532|ubiquitin specific peptidase 53	0.990572	CTCF.p2:-2:0.991
chr8	104086169	104086305	reg1012885.p1	9.776	+	TSC_hg19_v1_chr8_+_104033310 AK308632 BC010960 X69151 AK000064	-52917	+	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	-52970	+	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	-209842	-	TSC_hg19_v1_chr8_+_104152984 NM_001024372 NM_024812 BC035038 AK022077 BC011517 AK093819 AF371319 AF371323 DQ893318 DQ896633	66763	+	NM_001164615 BX640609 AK313789	224437	+	NM_001164616 NM_003506 TSC_hg19_v1_chr8_+_104311103 AK299341 AK296824 BC060836 BC036106 AB012911 AK304092 AK316544	224854	+	AK308632|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC010960|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##X69151|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK000064|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##NM_001024372|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_024812|BAALC|79870|brain and acute leukemia, cytoplasmic##BC035038|BAALC|79870|brain and acute leukemia, cytoplasmic##AK022077|BAALC|79870|brain and acute leukemia, cytoplasmic##BC011517|BAALC|79870|brain and acute leukemia, cytoplasmic##AK093819|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371319|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371323|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ893318|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ896633|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_001164615|FZD6|8323|frizzled family receptor 6##BX640609|FZD6|8323|frizzled family receptor 6##AK313789|FZD6|8323|frizzled family receptor 6##NM_001164616|FZD6|8323|frizzled family receptor 6##NM_003506|FZD6|8323|frizzled family receptor 6##AK299341|FZD6|8323|frizzled family receptor 6##AK296824|FZD6|8323|frizzled family receptor 6##BC060836|FZD6|8323|frizzled family receptor 6##BC036106|FZD6|8323|frizzled family receptor 6##AB012911|FZD6|8323|frizzled family receptor 6##AK304092|FZD6|8323|frizzled family receptor 6##AK316544|FZD6|8323|frizzled family receptor 6	0.999196	CTCF.p2:0:0.999
chr8	141169802	141169924	reg1012070.p1	9.776	+	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	-454581	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	-1243619	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-1660757	-	AB067469 TSC_hg19_v1_chr8_-_141467841	297962	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	297995	-	AK128755 NM_031466	298814	-	AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9##AK128755|TRAPPC9|83696|trafficking protein particle complex 9##NM_031466|TRAPPC9|83696|trafficking protein particle complex 9	0.0	
chr10	38654978	38655096	reg1013513.p1	9.774	+	AK295332 AY829267 AF165514 AF165517 BC071987 TSC_hg19_v1_chr10_+_38645320 AK293968 AK307174 CU687208	-9700	+	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	-271754	+	TSC_hg19_v1_chr10_+_38299631 NM_006954 NM_006974 AK303445 AK292844 BC017760 AK027057 D31763	-355442	+	TSC_hg19_v1_chr10_-_38691741 BC171738 BC042387 BC048143	36719	-	TSC_hg19_v1_chr10_-_42863441 AF519622 AK131313	4208426	-	AX721135 TSC_hg19_v1_chr10_-_43048257 AK308832 AK026980 BC045697 AX721116	4393165	-	AK295332|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AY829267|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165514|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165517|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC071987|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK293968|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK307174|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A##NM_006954|ZNF33A|7581|zinc finger protein 33A##NM_006974|ZNF33A|7581|zinc finger protein 33A##AK303445|ZNF33A|7581|zinc finger protein 33A##AK292844|ZNF33A|7581|zinc finger protein 33A##BC017760|ZNF33A|7581|zinc finger protein 33A##AK027057|ZNF33A|7581|zinc finger protein 33A##D31763|ZNF33A|7581|zinc finger protein 33A##BC171738|SEPT7L|285961|septin 7-like##BC042387|SEPT7L|285961|septin 7-like##BC048143|SEPT7L|285961|septin 7-like##AF519622|LOC441666|441666|zinc finger protein 91 pseudogene##AK308832|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##AK026980|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC045697|ZNF37BP|100129482|zinc finger protein 37B, pseudogene	0.527924	CTCF.p2:11:0.528
chr1	208418709	208418821	reg1012340.p1	9.774	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-1116	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-334208	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-334382	-	AK091113 AX746785 NM_001104548	1183400	+	NM_020439 AK095713 AK289675 AF428261 BC032787	1338295	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	1405914	-	NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3	0.999268	CTCF.p2:5:0.999
chr2	150417908	150418066	reg1013934.p1	9.774	+	NM_194317 TSC_hg19_v1_chr2_+_150187114 AY358623 AK309248	-230885	+	AK124733 NM_001195685	-231489	+	BC040176 NM_177964	-523007	+	AF131802 TSC_hg19_v1_chr2_-_150444230 AK313284	26238	-	TSC_hg19_v1_chr2_-_150444250 BC023995 BC010894 AK310001 AF161510 BC022859 BC000932	26270	-	TSC_hg19_v1_chr2_-_150444290 NM_015702	26320	-	NM_194317|LYPD6|130574|LY6/PLAUR domain containing 6##AY358623|LYPD6|130574|LY6/PLAUR domain containing 6##AK309248|LYPD6|130574|LY6/PLAUR domain containing 6##AK124733|LYPD6|130574|LY6/PLAUR domain containing 6##NM_001195685|LYPD6|130574|LY6/PLAUR domain containing 6##BC040176|LYPD6B|130576|LY6/PLAUR domain containing 6B##NM_177964|LYPD6B|130576|LY6/PLAUR domain containing 6B##AF131802|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK313284|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC023995|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC010894|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK310001|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF161510|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC022859|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC000932|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##NM_015702|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria	0.995022	CTCF.p2:7:0.995
chr3	171364291	171364418	reg1011953.p1	9.774	+	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-186283	-	NM_000340	-619587	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-619821	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	163901	-	NM_001164436 AK026825	196794	+	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	393061	+	AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B	0.479202	CTCF.p2:-14:0.479
chr4	176868418	176868527	reg1012794.p1	9.774	+	BC032904 NM_201591	-134291	-	BC044612 BC053954 TSC_hg19_v1_chr4_-_176733905	-134566	-	BC010461 BC022508 TSC_hg19_v1_chr4_-_176733419 D49958	-135031	-	BC022528 TSC_hg19_v1_chr4_-_176923504	55022	-	AK226176 TSC_hg19_v1_chr4_-_176923545	55068	-	TSC_hg19_v1_chr4_-_176923575 NM_005277 NM_201592	55137	-	BC032904|GPM6A|2823|glycoprotein M6A##NM_201591|GPM6A|2823|glycoprotein M6A##BC044612|GPM6A|2823|glycoprotein M6A##BC053954|GPM6A|2823|glycoprotein M6A##BC010461|GPM6A|2823|glycoprotein M6A##BC022508|GPM6A|2823|glycoprotein M6A##D49958|GPM6A|2823|glycoprotein M6A##BC022528|GPM6A|2823|glycoprotein M6A##AK226176|GPM6A|2823|glycoprotein M6A##NM_005277|GPM6A|2823|glycoprotein M6A##NM_201592|GPM6A|2823|glycoprotein M6A	0.650954	CTCF.p2:-2:0.651
chr17	76839503	76839637	reg1015553.p1	9.773	+	TSC_hg19_v1_chr17_-_76836895 AB040886 BC027992 AK022913 AK225155 BC016487 BC038983 NM_025090 AK001671	-2650	-	TSC_hg19_v1_chr17_-_76836843 AK225426	-2787	-	BC071582 TSC_hg19_v1_chr17_-_76836610	-2920	-	AK057217 NM_001243540 NM_001243541	59720	-	X54533 TSC_hg19_v1_chr17_-_76921138	81545	-	TSC_hg19_v1_chr17_-_76921336 M32304 J05593 S48568 BC052605	81758	-	AB040886|USP36|57602|ubiquitin specific peptidase 36##BC027992|USP36|57602|ubiquitin specific peptidase 36##AK022913|USP36|57602|ubiquitin specific peptidase 36##AK225155|USP36|57602|ubiquitin specific peptidase 36##BC016487|USP36|57602|ubiquitin specific peptidase 36##BC038983|USP36|57602|ubiquitin specific peptidase 36##NM_025090|USP36|57602|ubiquitin specific peptidase 36##AK001671|USP36|57602|ubiquitin specific peptidase 36##AK225426|USP36|57602|ubiquitin specific peptidase 36##BC071582|USP36|57602|ubiquitin specific peptidase 36##AK057217|LOC100653515|100653515|differential display clone 8##NM_001243540|LOC100653515|100653515|differential display clone 8##NM_001243541|LOC100653515|100653515|differential display clone 8##X54533|TIMP2|7077|TIMP metallopeptidase inhibitor 2##M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2##J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2##S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2##BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2	0.075646	
chr4	72136746	72136859	reg1013771.p1	9.773	+	AF069510 AB470072 AF053753 AF053754 AF310248 EF531618 TSC_hg19_v1_chr4_+_72102322	-34516	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	-84079	+	M60527 TSC_hg19_v1_chr4_+_71859434 BC114617 JF806429 BT019941 BT019942 CR536527 CR541876	-277331	+	BC030977 NM_003759 AF007216 AK308038 CU689062	68065	+	AB591002 CU691194 M12654 TSC_hg19_v1_chr4_-_72649797 AK290827 AK298433 AK312971 BC057228 BC022310 X03178 AK315853 NM_000583	513104	-	AK309595 NM_001204307	532955	-	AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##M60527|DCK|1633|deoxycytidine kinase##BC114617|DCK|1633|deoxycytidine kinase##JF806429|DCK|1633|deoxycytidine kinase##BT019941|DCK|1633|deoxycytidine kinase##BT019942|DCK|1633|deoxycytidine kinase##CR536527|DCK|1633|deoxycytidine kinase##CR541876|DCK|1633|deoxycytidine kinase##BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK290827|GC|2638|group-specific component (vitamin D binding protein)##AK298433|GC|2638|group-specific component (vitamin D binding protein)##AK312971|GC|2638|group-specific component (vitamin D binding protein)##BC057228|GC|2638|group-specific component (vitamin D binding protein)##BC022310|GC|2638|group-specific component (vitamin D binding protein)##X03178|GC|2638|group-specific component (vitamin D binding protein)##AK315853|GC|2638|group-specific component (vitamin D binding protein)##NM_000583|GC|2638|group-specific component (vitamin D binding protein)##AK309595|GC|2638|group-specific component (vitamin D binding protein)##NM_001204307|GC|2638|group-specific component (vitamin D binding protein)	0.0	
chr14	66537545	66537685	reg1013450.p1	9.772	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-657890	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-658127	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-658289	-	AB037806 AF272663 NM_001024218 NM_020806	436509	+	TSC_hg19_v1_chr14_+_66974859 AK025169	437238	+	TSC_hg19_v1_chr14_+_66974870 AK315569	437254	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.999521	CTCF.p2:22:1.000
chr9	16192307	16192412	reg1010573.p1	9.772	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-639338	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-681399	-	AF098483 AF098482 NM_021144	-682112	-	TSC_hg19_v1_chr9_-_16727889 AY438376	535538	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	678308	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	678407	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.998004	CTCF.p2:-3:0.998
chr8	143791834	143791939	reg1008215.p1	9.771	+	TSC_hg19_v1_chr8_+_143781527 NM_001160354 NM_001160355 NM_017527 AJ001348	-10355	+	NM_005672 AJ297436 AF043498 BC023582 BC048808 BC065183 CU692804 AY358912	-29980	+	TSC_hg19_v1_chr8_-_143751397 AK127631 NM_001077527 NM_003724 BX640755	-40485	-	TSC_hg19_v1_chr8_-_143808427 CR627188	16536	-	TSC_hg19_v1_chr8_+_143808691 BC001311 NM_016647 AK301564 AK315614 AF242773 BC019104 AK075407	16775	+	BC105135 BC105133 AY579079 AY579080 BC069292 NM_020427	31939	-	NM_001160354|LY6K|54742|lymphocyte antigen 6 complex, locus K##NM_001160355|LY6K|54742|lymphocyte antigen 6 complex, locus K##NM_017527|LY6K|54742|lymphocyte antigen 6 complex, locus K##AJ001348|LY6K|54742|lymphocyte antigen 6 complex, locus K##NM_005672|PSCA|8000|prostate stem cell antigen##AJ297436|PSCA|8000|prostate stem cell antigen##AF043498|PSCA|8000|prostate stem cell antigen##BC023582|PSCA|8000|prostate stem cell antigen##BC048808|PSCA|8000|prostate stem cell antigen##BC065183|PSCA|8000|prostate stem cell antigen##AY358912|PSCA|8000|prostate stem cell antigen##AK127631|JRK|8629|jerky homolog (mouse)##NM_001077527|JRK|8629|jerky homolog (mouse)##NM_003724|JRK|8629|jerky homolog (mouse)##BX640755|JRK|8629|jerky homolog (mouse)##CR627188|LOC100288181|100288181|uncharacterized LOC100288181##BC001311|C8orf55|51337|chromosome 8 open reading frame 55##NM_016647|C8orf55|51337|chromosome 8 open reading frame 55##AK315614|C8orf55|51337|chromosome 8 open reading frame 55##AF242773|C8orf55|51337|chromosome 8 open reading frame 55##BC019104|C8orf55|51337|chromosome 8 open reading frame 55##AK075407|C8orf55|51337|chromosome 8 open reading frame 55##BC105135|SLURP1|57152|secreted LY6/PLAUR domain containing 1##BC105133|SLURP1|57152|secreted LY6/PLAUR domain containing 1##AY579079|SLURP1|57152|secreted LY6/PLAUR domain containing 1##AY579080|SLURP1|57152|secreted LY6/PLAUR domain containing 1##BC069292|SLURP1|57152|secreted LY6/PLAUR domain containing 1##NM_020427|SLURP1|57152|secreted LY6/PLAUR domain containing 1	0.830069	CTCF.p2:8:0.830
chr11	64781092	64781223	reg1009408.p1	9.770	+	AB463431 AK096702 HM134154 NM_138456	-16705	-	BC106951 BC106952 NM_001037225	-53549	-	BC093960 BC093962 BC101523 AF260739 NM_130769	-77811	-	NM_001199745 NM_001667 AK223502 TSC_hg19_v1_chr11_+_64781642 BC002530 AK096447 L13687 EU832671 EU832750 AB527923 AK294580 AF493888 BT006674	474	+	NM_013306 NM_147777 TSC_hg19_v1_chr11_+_64794948 BC012767 BC014520 AK315642 AK315034 AF001435 BC009897 AF175267 AB527759 CU679523 AF175268 BT006631 AB209439	13788	+	NM_013299 TSC_hg19_v1_chr11_+_64808377	27224	+	AK096702|BATF2|116071|basic leucine zipper transcription factor, ATF-like 2##HM134154|BATF2|116071|basic leucine zipper transcription factor, ATF-like 2##NM_138456|BATF2|116071|basic leucine zipper transcription factor, ATF-like 2##BC106951|C11orf85|283129|chromosome 11 open reading frame 85##BC106952|C11orf85|283129|chromosome 11 open reading frame 85##NM_001037225|C11orf85|283129|chromosome 11 open reading frame 85##BC093960|GPHA2|170589|glycoprotein hormone alpha 2##BC093962|GPHA2|170589|glycoprotein hormone alpha 2##BC101523|GPHA2|170589|glycoprotein hormone alpha 2##AF260739|GPHA2|170589|glycoprotein hormone alpha 2##NM_130769|GPHA2|170589|glycoprotein hormone alpha 2##NM_001199745|ARL2|402|ADP-ribosylation factor-like 2##NM_001667|ARL2|402|ADP-ribosylation factor-like 2##AK223502|ARL2|402|ADP-ribosylation factor-like 2##BC002530|ARL2|402|ADP-ribosylation factor-like 2##AK096447|ARL2-SNX15|100528018|ARL2-SNX15 readthrough##L13687|ARL2|402|ADP-ribosylation factor-like 2##EU832671|ARL2|402|ADP-ribosylation factor-like 2##EU832750|ARL2|402|ADP-ribosylation factor-like 2##AK294580|ARL2|402|ADP-ribosylation factor-like 2##AF493888|ARL2|402|ADP-ribosylation factor-like 2##BT006674|ARL2|402|ADP-ribosylation factor-like 2##NM_013306|SNX15|29907|sorting nexin 15##NM_147777|SNX15|29907|sorting nexin 15##BC012767|SNX15|29907|sorting nexin 15##BC014520|SNX15|29907|sorting nexin 15##AK315642|SNX15|29907|sorting nexin 15##AK315034|SNX15|29907|sorting nexin 15##AF001435|SNX15|29907|sorting nexin 15##BC009897|SNX15|29907|sorting nexin 15##AF175267|SNX15|29907|sorting nexin 15##AF175268|SNX15|29907|sorting nexin 15##BT006631|SNX15|29907|sorting nexin 15##AB209439|SNX15|29907|sorting nexin 15##NM_013299|SAC3D1|29901|SAC3 domain containing 1	1.02271	CTCF.p2:-12:0.999
chr12	2166506	2166621	reg1012323.p1	9.770	+	AB209016 AJ224873 AY830711 AY830712 AY830713 Z34809 Z34810 Z34811 Z34812 Z34813 Z34814 Z34815 Z34816 Z34817 Z34818 Z34819 Z34820 Z34821 Z34822 Z74996 TSC_hg19_v1_chr12_+_2162753	-3835	+	TSC_hg19_v1_chr12_+_2162452 NM_000719 NM_001129827 NM_001129829 NM_001129830 NM_001129831 NM_001129832 NM_001129833 NM_001129834 NM_001129835 NM_001129836 NM_001129837 NM_001129838 NM_001129839 NM_001129840 NM_001129841 NM_001129842 NM_001129843 NM_001129844 NM_001129846 NM_001167623 NM_001167624 NM_001167625 NM_199460 AK309111 AF465484 AK308652 BC146846	-4069	+	TSC_hg19_v1_chr12_-_2113622 AB463561 AK301109 AK056200 AK299203 BC043437 AY146652 NM_152640	-52892	-	TSC_hg19_v1_chr12_+_2904161 NM_002014 AK313918 BC001786 M88279 BC007924	737591	+	TSC_hg19_v1_chr12_+_2904310 AB385011 CU674888 DQ893668 DQ895800	737739	+	NM_018463 TSC_hg19_v1_chr12_+_2921842 AK130319 AK297189 AK291110 AK300905 AK027483 BC006552 BC013399 DQ892711 DQ895963 CU675449 AY599883	755293	+	AB209016|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AJ224873|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830711|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830712|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830713|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34809|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34810|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34811|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34812|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34813|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34814|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34815|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34816|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34817|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34818|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34819|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34820|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34821|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34822|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z74996|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK301109|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK056200|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK299203|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC043437|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AY146652|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_152640|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_002014|FKBP4|2288|FK506 binding protein 4, 59kDa##AK313918|FKBP4|2288|FK506 binding protein 4, 59kDa##BC001786|FKBP4|2288|FK506 binding protein 4, 59kDa##M88279|FKBP4|2288|FK506 binding protein 4, 59kDa##BC007924|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ893668|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ895800|FKBP4|2288|FK506 binding protein 4, 59kDa##NM_018463|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK130319|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK297189|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK291110|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK300905|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK027483|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC006552|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC013399|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ892711|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ895963|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AY599883|ITFG2|55846|integrin alpha FG-GAP repeat containing 2	0.998634	CTCF.p2:-6:0.999
chr17	12906523	12906657	reg1011833.p2	9.770	+	TSC_hg19_v1_chr17_+_12692837 NM_014859 AB014572	-213773	+	AK097821 NM_001146313	-282985	+	TSC_hg19_v1_chr17_+_12569389 BC126307 BC143391 AF532596	-337156	+	TSC_hg19_v1_chr17_-_12921295 AK300011 AF304370 CR457261 CU674942	14686	-	TSC_hg19_v1_chr17_-_12921325 AK298397 AK094687 BC001939 BC004158	14729	-	TSC_hg19_v1_chr17_-_12921332 AK001392 NM_001165962 NM_018127 NM_173717	14766	-	NM_014859|ARHGAP44|9912|Rho GTPase activating protein 44##AB014572|ARHGAP44|9912|Rho GTPase activating protein 44##AK097821|MYOCD|93649|myocardin##NM_001146313|MYOCD|93649|myocardin##BC126307|MYOCD|93649|myocardin##BC143391|MYOCD|93649|myocardin##AF532596|MYOCD|93649|myocardin##AK300011|ELAC2|60528|elaC homolog 2 (E. coli)##AF304370|ELAC2|60528|elaC homolog 2 (E. coli)##CR457261|ELAC2|60528|elaC homolog 2 (E. coli)##AK298397|ELAC2|60528|elaC homolog 2 (E. coli)##AK094687|ELAC2|60528|elaC homolog 2 (E. coli)##BC001939|ELAC2|60528|elaC homolog 2 (E. coli)##BC004158|ELAC2|60528|elaC homolog 2 (E. coli)##AK001392|ELAC2|60528|elaC homolog 2 (E. coli)##NM_001165962|ELAC2|60528|elaC homolog 2 (E. coli)##NM_018127|ELAC2|60528|elaC homolog 2 (E. coli)##NM_173717|ELAC2|60528|elaC homolog 2 (E. coli)	0.841256	CTCF.p2:13:0.841
chr18	3995626	3995733	reg1011317.p1	9.770	+	AK294777 AK294717 NM_001242762 NM_001242763	-120952	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	-121395	-	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	-150349	-	AK304101 TSC_hg19_v1_chr18_-_4455255	459574	-	AK316099 NM_001242761 NM_004746 TSC_hg19_v1_chr18_-_4455271	459591	-	TSC_hg19_v1_chr18_-_5197257 NM_001145194	1201573	-	AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK304101|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK316099|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242761|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_004746|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42	0.978728	CTCF.p2:12:0.979
chr6	106892922	106893050	reg1012476.p2	9.770	+	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	-119323	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	-119454	-	BC002699 TSC_hg19_v1_chr6_-_106773313	-119678	-	AK056705 NM_001624	66743	+	TSC_hg19_v1_chr6_+_106960443 U83115	67425	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	184294	-	CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK056705|AIM1|202|absent in melanoma 1##NM_001624|AIM1|202|absent in melanoma 1##U83115|AIM1|202|absent in melanoma 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1	0.994521	CTCF.p2:-3:0.995
chr8	97192443	97192553	reg1011688.p1	9.770	+	BC127948 BC127947 AJ537424 NM_001001557	-19517	-	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	-911033	-	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	-911447	+	CR542176 CR542196 TSC_hg19_v1_chr8_-_97247774 AK307085 NM_001199975 BC041005 AK295007 AK311756 M22348 X13585 M26700 BC005230 NM_006294	55311	-	BC012995 NM_015942 TSC_hg19_v1_chr8_-_97273837 AK309002	81319	-	TSC_hg19_v1_chr8_+_97274125 AK293036	81620	+	BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6##BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_001199975|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC012995|MTERFD1|51001|MTERF domain containing 1##NM_015942|MTERFD1|51001|MTERF domain containing 1##AK309002|MTERFD1|51001|MTERF domain containing 1##AK293036|PTDSS1|9791|phosphatidylserine synthase 1	0.998198	CTCF.p2:17:0.998
chr9	139923934	139924039	reg1013172.p2	9.770	+	TSC_hg19_v1_chr9_-_139923225 BC144588 BC144589 NM_212533	-693	-	TSC_hg19_v1_chr9_-_139922765 NM_001606	-1234	-	AB384556 AF327657 BC029282 BC064542 BC090860 TSC_hg19_v1_chr9_-_139922684 AK308738 AF178941	-1347	-	BC086312 NM_004479	3305	-	HQ258737 TSC_hg19_v1_chr9_+_139927632 AK093587 AX748216	3588	+	TSC_hg19_v1_chr9_-_139940543 AK225091 AF272357	16523	-	BC144588|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC144589|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##NM_212533|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##NM_001606|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##AF327657|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC029282|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC064542|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC090860|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##AK308738|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##AF178941|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC086312|FUT7|2529|fucosyltransferase 7 (alpha (1,3) fucosyltransferase)##NM_004479|FUT7|2529|fucosyltransferase 7 (alpha (1,3) fucosyltransferase)##HQ258737|C9orf139|401563|chromosome 9 open reading frame 139##AK093587|C9orf139|401563|chromosome 9 open reading frame 139##AK225091|NPDC1|56654|neural proliferation, differentiation and control, 1##AF272357|NPDC1|56654|neural proliferation, differentiation and control, 1	0.999246	CTCF.p2:5:0.999
chrX	131353441	131353594	reg1012580.p2	9.770	+	BC035382 TSC_hg19_v1_chrX_-_131353476 AK310997	-16	-	TSC_hg19_v1_chrX_+_131352259 AK095439	-1090	+	TSC_hg19_v1_chrX_-_131352063 BC051467 AY298955 NM_021183	-1457	-	AY372211 AK002178 NM_001170701 NM_001170702 AK300248 NM_001170703	194068	-	AF491305 EU446986 BC074775 BC074776 AB077698 AB077699 AF467070 AJ427918 AJ427919 AY072692 NM_018388 NM_133486	220160	-	BC042090 NM_001170704 TSC_hg19_v1_chrX_-_131624064	270516	-	BC035382|RAP2C|57826|RAP2C, member of RAS oncogene family##AK310997|RAP2C|57826|RAP2C, member of RAS oncogene family##BC051467|RAP2C|57826|RAP2C, member of RAS oncogene family##AY298955|RAP2C|57826|RAP2C, member of RAS oncogene family##NM_021183|RAP2C|57826|RAP2C, member of RAS oncogene family##AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)##EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)	0.998898	CTCF.p2:5:0.999
chr13	51106160	51106323	reg1014088.p1	9.769	+	AJ412041 AJ412042 AJ412043 TSC_hg19_v1_chr13_+_50760088	-346188	+	TSC_hg19_v1_chr13_-_50699781 AF380424	-406426	-	AJ412023 AJ412024 AJ412025 AJ412026 AJ412038 AJ412039 AJ412054 AJ412055 AJ412056 AJ412057 AJ412058 AJ412059 AJ412060 AJ412061 AJ412062 Y15227 TSC_hg19_v1_chr13_+_50656364 BC004131 AK312167 BC020692 AK095311	-449896	+	AY357595 BC104892 BC112009 NM_198989 AK303567 AK126830	311711	-	NM_001142279 NM_024570 TSC_hg19_v1_chr13_+_51483898	377615	+	TSC_hg19_v1_chr13_+_51483905 AY764036	377663	+	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AJ412023|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412024|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412061|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412062|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##Y15227|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC020692|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AK095311|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7##AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_001142279|RNASEH2B|79621|ribonuclease H2, subunit B##NM_024570|RNASEH2B|79621|ribonuclease H2, subunit B##AY764036|RNASEH2B|79621|ribonuclease H2, subunit B	0.475644	CTCF.p2:0:0.476
chr22	42218898	42219047	reg1014116.p1	9.769	+	TSC_hg19_v1_chr22_+_42196682 NM_024821 AK026002 AK299311 BC017693 CR456484	-22300	+	BC025400 NM_152513 BC035720 BC144638	-123460	+	BC035403 NM_001142964 AK131457	-132414	+	NM_004599 TSC_hg19_v1_chr22_+_42229105	10133	+	TSC_hg19_v1_chr22_+_42229114 BC051799	10140	+	TSC_hg19_v1_chr22_+_42229253 BC056158 U02031 BC051385 CT841522 AK299914	10229	+	NM_024821|CCDC134|79879|coiled-coil domain containing 134##AK026002|CCDC134|79879|coiled-coil domain containing 134##AK299311|CCDC134|79879|coiled-coil domain containing 134##BC017693|CCDC134|79879|coiled-coil domain containing 134##CR456484|CCDC134|79879|coiled-coil domain containing 134##BC025400|MEI1|150365|meiosis inhibitor 1##NM_152513|MEI1|150365|meiosis inhibitor 1##BC035720|MEI1|150365|meiosis inhibitor 1##BC144638|MEI1|150365|meiosis inhibitor 1##BC035403|C22orf46|79640|chromosome 22 open reading frame 46##NM_001142964|C22orf46|79640|chromosome 22 open reading frame 46##AK131457|C22orf46|79640|chromosome 22 open reading frame 46##NM_004599|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051799|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC056158|SREBF2|6721|sterol regulatory element binding transcription factor 2##U02031|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051385|SREBF2|6721|sterol regulatory element binding transcription factor 2##CT841522|SREBF2|6721|sterol regulatory element binding transcription factor 2##AK299914|SREBF2|6721|sterol regulatory element binding transcription factor 2	0.905822	CTCF.p2:-18:0.906
chr12	43838880	43839006	reg1014369.p1	9.768	+	BC114939 BC114940 AF399844 AF543759 AF543760 AK056499 TSC_hg19_v1_chr12_-_42983549 NM_153026	-855451	-	TSC_hg19_v1_chr12_-_42877811 NM_001144882 NM_001144883	-961144	-	AK122881 TSC_hg19_v1_chr12_-_42877772	-961185	-	AF488804 AJ515153 AJ515154 NM_025003	106780	-	AL136759 TSC_hg19_v1_chr12_-_44152566 BX647494 NM_001098615 AK097331 AK225903 NM_001098614 BC020781 CR627435 BC068502 AK092030 AX747323 NM_031292	313632	-	AK304583 NM_001114182 NM_001145256 NM_001145257 NM_001145258 NM_016123 AK299944 AK314288 TSC_hg19_v1_chr12_+_44152757	313808	+	BC114939|PRICKLE1|144165|prickle homolog 1 (Drosophila)##BC114940|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF399844|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543759|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543760|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK056499|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_153026|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF488804|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AJ515153|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AJ515154|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##NM_025003|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AL136759|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BX647494|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098615|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK097331|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK225903|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098614|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC020781|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##CR627435|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC068502|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK092030|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_031292|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK304583|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001114182|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145256|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145257|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145258|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_016123|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK299944|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK314288|IRAK4|51135|interleukin-1 receptor-associated kinase 4	0.999406	CTCF.p2:-1:0.999
chr17	20284721	20284841	reg1012778.p1	9.768	+	TSC_hg19_v1_chr17_+_20224469 BC036241	-60315	+	BC033618 TSC_hg19_v1_chr17_+_20108434 AK298601	-176347	+	TSC_hg19_v1_chr17_+_20059384 NM_001033554 NM_001033555 NM_001243438 AK301318 AK304186 AY816326 AY816327 BC021123 BC050058	-225447	+	BC105943 AK290263 NM_001042685 AK296659	86054	-	NM_001190790	198255	+	AK057473 TSC_hg19_v1_chr17_+_20771859 BC041488 EF565107	487024	+	BC036241|CCDC144C|348254|coiled-coil domain containing 144C##BC033618|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK298601|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033554|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033555|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001243438|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK301318|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK304186|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816326|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816327|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC021123|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC050058|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK290263|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001042685|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2	0.209097	CTCF.p2:-4:0.209
chr8	64058315	64058436	reg1013102.p1	9.768	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-59748	-	NM_003878	-106766	-	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	-106977	-	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	22769	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	22825	+	NM_152414 AK293979	1434483	+	U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_003878|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22	0.518199	CTCF.p2:-16:0.518
chr1	10092670	10092787	reg1011778.p2	9.767	+	BC063013 NM_052960 BC033883 AF399927 AK312027 AY145438 CU687628	-35444	+	TSC_hg19_v1_chr1_+_10003532 AK315640	-89185	+	NM_022787 BC014943 TSC_hg19_v1_chr1_+_10003497 AK026065 AK222920	-89232	+	TSC_hg19_v1_chr1_+_10093015 AB028839 NM_001105562 NM_006048	287	+	AB014584 TSC_hg19_v1_chr1_+_10093218	485	+	TSC_hg19_v1_chr1_+_10270680 AK308121 NM_015074 NM_183416 AF257176 AY139835	178043	+	BC063013|RBP7|116362|retinol binding protein 7, cellular##NM_052960|RBP7|116362|retinol binding protein 7, cellular##BC033883|RBP7|116362|retinol binding protein 7, cellular##AF399927|RBP7|116362|retinol binding protein 7, cellular##AK312027|RBP7|116362|retinol binding protein 7, cellular##AY145438|RBP7|116362|retinol binding protein 7, cellular##AK315640|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##NM_022787|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##BC014943|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK026065|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK222920|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AB028839|UBE4B|10277|ubiquitination factor E4B##NM_001105562|UBE4B|10277|ubiquitination factor E4B##NM_006048|UBE4B|10277|ubiquitination factor E4B##AB014584|UBE4B|10277|ubiquitination factor E4B##AK308121|KIF1B|23095|kinesin family member 1B##NM_015074|KIF1B|23095|kinesin family member 1B##NM_183416|KIF1B|23095|kinesin family member 1B##AF257176|KIF1B|23095|kinesin family member 1B##AY139835|KIF1B|23095|kinesin family member 1B	0.994574	CTCF.p2:-4:0.995
chr15	102519788	102519923	reg1011427.p2	9.767	+	TSC_hg19_v1_chr15_+_102501827 AK024448 BC067227 DQ786211	-18017	+	AL137714 AK302089 TSC_hg19_v1_chr15_+_102501817 AK291582 BC047449 BC063470 AK292759 AK300161 AK308540 AK308566 AK309926 AK095183 BC027921 AK295256	-18103	+	NM_001004195 BC136848 BC136867 BC136907 BC136908 AY972818 AY972819	-56566	-	None	None	None	None	None	None	None	None	None	AK024448|WASH1|100287171|WAS protein family homolog 1##BC067227|WASH3P|374666|WAS protein family homolog 3 pseudogene##DQ786211|LOC100134445|100134445|uncharacterized LOC100134445##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK292759|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK295256|WASH3P|374666|WAS protein family homolog 3 pseudogene##NM_001004195|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136848|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136867|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136907|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136908|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##AY972818|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AY972819|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4	2.165123	CTCF.p2:24:0.999	CTCF.p2:82:1.000
chr16	9254103	9254240	reg1013782.p1	9.767	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-68568	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-68631	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-196876	-	BC143273 U09002 NM_001134408	1021662	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	1022017	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	1022506	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.999806	CTCF.p2:-13:1.000
chr3	170881149	170881243	reg1011449.p1	9.767	+	NM_000340	-136429	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-136663	-	AB528020 J03810 TSC_hg19_v1_chr3_-_170744510 AK313622 BC060041 AK290846 AK292741	-136706	-	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	296875	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	647059	-	NM_001164436 AK026825	679952	+	NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##J03810|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK313622|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##BC060041|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK290846|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK292741|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212	0.991249	CTCF.p2:-16:0.991
chr5	140800497	140800625	reg1012035.p1	9.766	+	TSC_hg19_v1_chr5_+_140797279 AF152336 AF152523	-3213	+	TSC_hg19_v1_chr5_+_140797246 NM_018927	-3310	+	TSC_hg19_v1_chr5_+_140797217 NM_032101	-3345	+	NM_018914 NM_032091 NM_032092 TSC_hg19_v1_chr5_+_140800602	8	+	TSC_hg19_v1_chr5_+_140800620 BC136781 BC171774 AF152320 AF152504 AF152505	142	+	AY358946 TSC_hg19_v1_chr5_+_140810073	9459	+	AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7##AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7##NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7##NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7##NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11##NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11##NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11##BC136781|PCDHGA11|56105|protocadherin gamma subfamily A, 11##BC171774|PCDHGA11|56105|protocadherin gamma subfamily A, 11##AF152320|PCDHGA11|56105|protocadherin gamma subfamily A, 11##AF152504|PCDHGA11|56105|protocadherin gamma subfamily A, 11##AF152505|PCDHGA11|56105|protocadherin gamma subfamily A, 11##AY358946|PCDHGA12|26025|protocadherin gamma subfamily A, 12	0.0	
chr12	69548523	69548658	reg1013555.p1	9.765	+	J04970 NM_001874 AK127859	-191571	-	TSC_hg19_v1_chr12_-_69326952 AF368463 AK313180 BC022276 NM_001005502 NM_198320	-221628	-	EU076746 EU076747 EU076748 EU076749 TSC_hg19_v1_chr12_+_69202803	-345789	+	NM_007007 TSC_hg19_v1_chr12_+_69633348 AK223568 AK299928	84743	+	TSC_hg19_v1_chr12_+_69633357 BC005000 BC000714 X67337 AK292024 CU674352 CU678850 DQ892159 EU176688	84799	+	TSC_hg19_v1_chr12_+_69742133 AK130149 NM_000239	193541	+	J04970|CPM|1368|carboxypeptidase M##NM_001874|CPM|1368|carboxypeptidase M##AK127859|CPM|1368|carboxypeptidase M##AF368463|CPM|1368|carboxypeptidase M##AK313180|CPM|1368|carboxypeptidase M##BC022276|CPM|1368|carboxypeptidase M##NM_001005502|CPM|1368|carboxypeptidase M##NM_198320|CPM|1368|carboxypeptidase M##EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK130149|LYZ|4069|lysozyme##NM_000239|LYZ|4069|lysozyme	0.997943	CTCF.p2:-3:0.998
chr14	75327734	75327865	reg1011752.p1	9.765	+	TSC_hg19_v1_chr14_+_75283667 BC023570	-44099	+	TSC_hg19_v1_chr14_+_75230066 AK095760 NM_019589	-97767	+	TSC_hg19_v1_chr14_+_75179883 NM_015962 AK290666 BC022361 AK021636 BC080600 BX248271	-147924	+	BC105720 BC105721 BC105927 NM_001080408 NM_001243007	2736	-	TSC_hg19_v1_chr14_+_75348624 NM_001244883 NM_001933 AK289414 BX248276 AK299505 AK316463 AK300396 BC000302 BC001922 BC002735 BX248764 D16373 CR456727 CU674146 L37418 BX248774	20826	+	NM_031464	61345	-	BC023570|YLPM1|56252|YLP motif containing 1##AK095760|YLPM1|56252|YLP motif containing 1##NM_019589|YLPM1|56252|YLP motif containing 1##NM_015962|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK290666|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC022361|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK021636|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC080600|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BX248271|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC105720|PROX2|283571|prospero homeobox 2##BC105721|PROX2|283571|prospero homeobox 2##BC105927|PROX2|283571|prospero homeobox 2##NM_001080408|PROX2|283571|prospero homeobox 2##NM_001243007|PROX2|283571|prospero homeobox 2##NM_001244883|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##NM_001933|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK289414|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248276|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK299505|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK316463|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK300396|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC000302|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC001922|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC002735|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248764|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##D16373|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##CR456727|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##L37418|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248774|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##NM_031464|RPS6KL1|83694|ribosomal protein S6 kinase-like 1	0.997438	CTCF.p2:-2:0.997
chr20	47940368	47940484	reg1010626.p2	9.765	+	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-45231	+	TSC_hg19_v1_chr20_+_47895176 BC042807 CR936805	-45254	+	TSC_hg19_v1_chr20_-_47894629 BC030789 NM_021035	-45753	-	BC110572 BC110573 NM_004975	158753	-	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	244263	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	389804	-	BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC042807|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##CR936805|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC030789|ZNFX1|57169|zinc finger, NFX1-type containing 1##NM_021035|ZNFX1|57169|zinc finger, NFX1-type containing 1##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.043881	
chr6	7239152	7239275	reg1011155.p1	9.765	+	BX647723 TSC_hg19_v1_chr6_+_7108910	-130310	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	-130990	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	-131178	+	BT007387 CR456961 AB464204 DQ892751 EU176743 TSC_hg19_v1_chr6_-_7313433 Z12830 AK075562 AK222762 AK222809 AK291550 AK312653 CR936719 BC007710 NM_003144	74233	-	AF414185 NM_001170692 NM_001170693 NM_205864 TSC_hg19_v1_chr6_-_7389974	150754	-	TSC_hg19_v1_chr6_+_7390042 AY094356 AK314467 BC006104 NM_031480 AK054568	150885	+	BX647723|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##BT007387|SSR1|6745|signal sequence receptor, alpha##CR456961|SSR1|6745|signal sequence receptor, alpha##DQ892751|SSR1|6745|signal sequence receptor, alpha##EU176743|SSR1|6745|signal sequence receptor, alpha##Z12830|SSR1|6745|signal sequence receptor, alpha##AK075562|SSR1|6745|signal sequence receptor, alpha##AK222762|SSR1|6745|signal sequence receptor, alpha##AK222809|SSR1|6745|signal sequence receptor, alpha##AK291550|SSR1|6745|signal sequence receptor, alpha##AK312653|SSR1|6745|signal sequence receptor, alpha##CR936719|SSR1|6745|signal sequence receptor, alpha##BC007710|SSR1|6745|signal sequence receptor, alpha##NM_003144|SSR1|6745|signal sequence receptor, alpha##AF414185|CAGE1|285782|cancer antigen 1##NM_001170692|CAGE1|285782|cancer antigen 1##NM_001170693|CAGE1|285782|cancer antigen 1##NM_205864|CAGE1|285782|cancer antigen 1##AY094356|RIOK1|83732|RIO kinase 1 (yeast)##AK314467|RIOK1|83732|RIO kinase 1 (yeast)##BC006104|RIOK1|83732|RIO kinase 1 (yeast)##NM_031480|RIOK1|83732|RIO kinase 1 (yeast)##AK054568|RIOK1|83732|RIO kinase 1 (yeast)	0.878938	CTCF.p2:2:0.879
chr12	11381307	11381426	reg1013945.p1	9.764	+	BC131742 NM_181429	-41824	-	TSC_hg19_v1_chr12_-_11324213 AK123548 BC071692 BC064553 AB593030 AB593028 BC031043 AB593029	-57174	-	NM_001097643	-94524	-	BC096209 BC096210 BC096211 BC096212 NM_006249	41274	-	BC130386 BC035362 K03207 NM_002723 BC128191	81994	-	BC044827 K03205 K03206 BC141917 K03204 NM_005039 NM_199353 NM_199354 AX772842	127150	-	BC131742|TAS2R42|353164|taste receptor, type 2, member 42##NM_181429|TAS2R42|353164|taste receptor, type 2, member 42##AK123548|TAS2R14|50840|taste receptor, type 2, member 14##BC071692|PRH1-PRR4|100533464|PRH1-PRR4 readthrough##BC064553|PRH1|5554|proline-rich protein HaeIII subfamily 1##BC031043|PRH1|5554|proline-rich protein HaeIII subfamily 1##NM_001097643|TAS2R30|259293|taste receptor, type 2, member 30##BC096209|PRB3|5544|proline-rich protein BstNI subfamily 3##BC096210|PRB3|5544|proline-rich protein BstNI subfamily 3##BC096211|PRB3|5544|proline-rich protein BstNI subfamily 3##BC096212|PRB3|5544|proline-rich protein BstNI subfamily 3##NM_006249|PRB3|5544|proline-rich protein BstNI subfamily 3##BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4##BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4##K03207|PRB4|5545|proline-rich protein BstNI subfamily 4##NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4##BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4##BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##K03205|PRB1|5542|proline-rich protein BstNI subfamily 1##K03206|PRB1|5542|proline-rich protein BstNI subfamily 1##BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1##K03204|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1	0.155887	
chr15	50967850	50968031	reg1011779.p1	9.764	+	NM_203494	-129039	-	TSC_hg19_v1_chr15_+_50716601 AK292400 BX537420 NM_001128610 NM_001128611 NM_005154 AK296480 BC038801 D29956 BC015545 BC110590 BC092443 BC026954 BC051345	-251319	+	TSC_hg19_v1_chr15_+_50647681 BX537481	-320269	+	TSC_hg19_v1_chr15_-_50978746 BC128987 BC128988	10826	-	TSC_hg19_v1_chr15_-_50978923 AK000124	10999	-	TSC_hg19_v1_chr15_-_50978974 AF346629	11028	-	NM_203494|USP50|373509|ubiquitin specific peptidase 50##AK292400|USP8|9101|ubiquitin specific peptidase 8##BX537420|USP8|9101|ubiquitin specific peptidase 8##NM_001128610|USP8|9101|ubiquitin specific peptidase 8##NM_001128611|USP8|9101|ubiquitin specific peptidase 8##NM_005154|USP8|9101|ubiquitin specific peptidase 8##AK296480|USP8|9101|ubiquitin specific peptidase 8##BC038801|USP8|9101|ubiquitin specific peptidase 8##D29956|USP8|9101|ubiquitin specific peptidase 8##BC015545|USP8|9101|ubiquitin specific peptidase 8##BC110590|USP8|9101|ubiquitin specific peptidase 8##BC092443|USP8|9101|ubiquitin specific peptidase 8##BC026954|USP8|9101|ubiquitin specific peptidase 8##BC051345|USP8|9101|ubiquitin specific peptidase 8##BX537481|LOC100129387|100129387|uncharacterized LOC100129387##BC128987|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7##BC128988|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7##AK000124|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7##AF346629|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7	0.079725	
chr6	47748630	47748750	reg1011057.p2	9.764	+	AK095395 NM_153838 DQ315370	-82396	+	AY140953 DQ315369 NM_153839	-124417	+	TSC_hg19_v1_chr6_+_47445937 AF146277 BC069444	-302774	+	BC126194 BC126198 NM_181744 AY377391 AY288419 HQ258199	1098	+	BC136779 AK123835 AK299301 NM_001013732 NM_207499	287714	-	TSC_hg19_v1_chr6_-_48078931 AK300335	330235	-	AK095395|GPR115|221393|G protein-coupled receptor 115##NM_153838|GPR115|221393|G protein-coupled receptor 115##DQ315370|GPR115|221393|G protein-coupled receptor 115##AY140953|GPR111|222611|G protein-coupled receptor 111##DQ315369|GPR111|222611|G protein-coupled receptor 111##NM_153839|GPR111|222611|G protein-coupled receptor 111##AF146277|CD2AP|23607|CD2-associated protein##BC069444|CD2AP|23607|CD2-associated protein##BC126194|OPN5|221391|opsin 5##BC126198|OPN5|221391|opsin 5##NM_181744|OPN5|221391|opsin 5##AY377391|OPN5|221391|opsin 5##AY288419|OPN5|221391|opsin 5##HQ258199|OPN5|221391|opsin 5##BC136779|C6orf138|442213|chromosome 6 open reading frame 138##AK123835|C6orf138|442213|chromosome 6 open reading frame 138##AK299301|C6orf138|442213|chromosome 6 open reading frame 138##NM_001013732|C6orf138|442213|chromosome 6 open reading frame 138##NM_207499|C6orf138|442213|chromosome 6 open reading frame 138##AK300335|C6orf138|442213|chromosome 6 open reading frame 138	0.109285	
chr8	102149556	102149699	reg1010671.p1	9.764	+	TSC_hg19_v1_chr8_-_101965608 NM_003406	-184004	-	TSC_hg19_v1_chr8_-_101965595 M86400	-184051	-	TSC_hg19_v1_chr8_-_101965198 NM_001135699	-184401	-	BC035233 TSC_hg19_v1_chr8_-_102217845 BC015925 AF125099 AF275802 AF275809 AK290477 BC068524	68066	-	TSC_hg19_v1_chr8_-_102217877 NM_001042511	68249	-	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	68327	-	NM_003406|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##M86400|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135699|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##BC035233|ZNF706|51123|zinc finger protein 706##BC015925|ZNF706|51123|zinc finger protein 706##AF125099|ZNF706|51123|zinc finger protein 706##AF275802|ZNF706|51123|zinc finger protein 706##AF275809|ZNF706|51123|zinc finger protein 706##AK290477|ZNF706|51123|zinc finger protein 706##BC068524|ZNF706|51123|zinc finger protein 706##NM_001042511|ZNF706|51123|zinc finger protein 706##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706	1.281138	CTCF.p2:-2:0.977	CTCF.p2:-32:0.304
chr15	90630153	90630262	reg1011176.p1	9.763	+	TSC_hg19_v1_chr15_+_90544707 BC020301 AK094712 NM_198526	-85518	+	AK093274 AX748027 CU691000 TSC_hg19_v1_chr15_-_90456145 AK000495 BC053602 NM_001199058 NM_182616	-174102	-	NM_005829	-192591	-	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	15455	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	15498	-	TSC_hg19_v1_chr15_-_90645713 AK312627	15520	-	BC020301|ZNF710|374655|zinc finger protein 710##AK094712|ZNF710|374655|zinc finger protein 710##NM_198526|ZNF710|374655|zinc finger protein 710##AK093274|C15orf38|348110|chromosome 15 open reading frame 38##AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##BC053602|C15orf38|348110|chromosome 15 open reading frame 38##NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##NM_182616|C15orf38|348110|chromosome 15 open reading frame 38##NM_005829|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial	0.99467	CTCF.p2:6:0.995
chr19	2872281	2872403	reg1011819.p1	9.763	+	AK021699 AK225297 NM_024967 BC009374	-5000	+	NM_001172775 NM_152791 AK093163 AX747966 AL832140 BX647423 BC022022 AK292954	-30884	+	TSC_hg19_v1_chr19_+_2819942 BC000113 CU690506	-52337	+	EF534355 NM_173480 TSC_hg19_v1_chr19_+_2900954 BX537601 BC028974 AK314848	28593	+	TSC_hg19_v1_chr19_-_2944927 AK290979 BC043354 BC062561 NM_021217	72601	-	TSC_hg19_v1_chr19_+_2977532 NM_001143986 NM_024760 AK024071 BC013986 BC020206 BC007329 BC068052	105224	+	AK021699|ZNF556|80032|zinc finger protein 556##AK225297|ZNF556|80032|zinc finger protein 556##NM_024967|ZNF556|80032|zinc finger protein 556##BC009374|ZNF556|80032|zinc finger protein 556##NM_001172775|ZNF555|148254|zinc finger protein 555##NM_152791|ZNF555|148254|zinc finger protein 555##AK093163|ZNF555|148254|zinc finger protein 555##AL832140|ZNF555|148254|zinc finger protein 555##BX647423|ZNF555|148254|zinc finger protein 555##BC022022|ZNF555|148254|zinc finger protein 555##AK292954|ZNF555|148254|zinc finger protein 555##BC000113|ZNF554|115196|zinc finger protein 554##EF534355|ZNF57|126295|zinc finger protein 57##NM_173480|ZNF57|126295|zinc finger protein 57##BX537601|ZNF57|126295|zinc finger protein 57##BC028974|ZNF57|126295|zinc finger protein 57##AK314848|ZNF57|126295|zinc finger protein 57##AK290979|ZNF77|58492|zinc finger protein 77##BC043354|ZNF77|58492|zinc finger protein 77##BC062561|ZNF77|58492|zinc finger protein 77##NM_021217|ZNF77|58492|zinc finger protein 77##NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	0.830068	CTCF.p2:29:0.830
chr6	36692500	36692605	reg1011161.p1	9.763	+	AK125083 TSC_hg19_v1_chr6_+_36665627	-26924	+	TSC_hg19_v1_chr6_+_36646490 BC013967 AB209881 BC001935 BC000312 L25610 L26165 U03106 S67388 BC000275 L47232 L47233 AY008263	-46027	+	NM_000389 TSC_hg19_v1_chr6_+_36646486 AK309512 NM_001220778 U09579	-46081	+	TSC_hg19_v1_chr6_-_36807217 NM_020939	114666	-	TSC_hg19_v1_chr6_-_36807775 AB046819	115240	-	DQ892513 DQ895727 AB528504 TSC_hg19_v1_chr6_-_36842573 AK026636	150025	-	AK125083|RAB44|401258|RAB44, member RAS oncogene family##BC013967|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AB209881|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC001935|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000312|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L25610|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L26165|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U03106|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##S67388|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000275|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47232|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47233|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_000389|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK309512|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_001220778|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U09579|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_020939|CPNE5|57699|copine V##AB046819|CPNE5|57699|copine V##DQ892513|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##DQ895727|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##AK026636|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1	0.996148	CTCF.p2:20:0.996
chr17	34658776	34658917	reg1014063.p1	9.762	+	AY766447 AY766449 AY766450 AY766455 AY766456 BC070310 NM_001001435 NM_207007 BC071718 BC130456 BC130458 BC144393 BC144394 HQ258694	-18778	+	D63785 BT006783 BC146914 BC146919 BC147008 BC147013 BC007783 X52149 BC027888 BC063472 NM_001001437 NM_021006 BC107710	-33167	-	BC033670 AL136860 AK301823 BC071680 AK225985 AK292308 NM_001001418	-66852	-	BC047739 AL136860 AK301823 BC071680 AK225985 AK302064 NM_001123392	98168	-	BC033670 BC047739 AK225985 AK302064 BC075809 AK292344 NM_001040282	149216	-	NM_004773 AF400652 BC105608 BC017931 AK290858 AK310022 AB464422 AK308583 L40410 TSC_hg19_v1_chr17_+_34842662	183721	+	AY766447|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766449|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766450|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766455|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC070310|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_001001435|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_207007|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##BC130456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC130458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144393|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144394|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##HQ258694|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BT006783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC146914|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC146919|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147008|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147013|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC007783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##X52149|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC027888|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC063472|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_001001437|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_021006|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC107710|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK292308|TBC1D3C|414060|TBC1 domain family, member 3C##NM_001001418|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK302064|TBC1D3|729873|TBC1 domain family, member 3##NM_001123392|TBC1D3H|729877|TBC1 domain family, member 3H##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC075809|TBC1D3G|654341|TBC1 domain family, member 3G##AK292344|TBC1D3G|654341|TBC1 domain family, member 3G##NM_001040282|TBC1D3G|654341|TBC1 domain family, member 3G##NM_004773|ZNHIT3|9326|zinc finger, HIT-type containing 3##AF400652|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC105608|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC017931|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK290858|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK310022|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK308583|ZNHIT3|9326|zinc finger, HIT-type containing 3##L40410|ZNHIT3|9326|zinc finger, HIT-type containing 3	0.0	
chr9	102028924	102029082	reg1012286.p1	9.762	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-44416	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-44760	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-44786	-	TSC_hg19_v1_chr9_-_102582187 AK057451	553162	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	555154	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	639924	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.078397	
chr3	183187256	183187372	reg1011136.p1	9.761	+	TSC_hg19_v1_chr3_+_183165436 AK057000	-21884	+	NM_015078 BC064632 AK124500 AK310962	-41375	-	TSC_hg19_v1_chr3_+_182971608 AK091474 AX747008	-215708	+	AF441792 CU689348 DQ894788 EU176275 TSC_hg19_v1_chr3_-_183273495 AK097125 AK314473 BX648370 BC032348 NM_130446	86138	-	BC142993 TSC_hg19_v1_chr3_+_183353410 AK026326 AY422472 BX648466 BX648812 NM_017644	166086	+	TSC_hg19_v1_chr3_+_183415597 AB033023 BC150273 NM_018023	228308	+	AK057000|LOC100505687|100505687|uncharacterized LOC100505687##NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AF441792|KLHL6|89857|kelch-like 6 (Drosophila)##DQ894788|KLHL6|89857|kelch-like 6 (Drosophila)##EU176275|KLHL6|89857|kelch-like 6 (Drosophila)##AK097125|KLHL6|89857|kelch-like 6 (Drosophila)##AK314473|KLHL6|89857|kelch-like 6 (Drosophila)##BX648370|KLHL6|89857|kelch-like 6 (Drosophila)##BC032348|KLHL6|89857|kelch-like 6 (Drosophila)##NM_130446|KLHL6|89857|kelch-like 6 (Drosophila)##BC142993|KLHL24|54800|kelch-like 24 (Drosophila)##AK026326|KLHL24|54800|kelch-like 24 (Drosophila)##AY422472|KLHL24|54800|kelch-like 24 (Drosophila)##BX648466|KLHL24|54800|kelch-like 24 (Drosophila)##BX648812|KLHL24|54800|kelch-like 24 (Drosophila)##NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)##AB033023|YEATS2|55689|YEATS domain containing 2##BC150273|YEATS2|55689|YEATS domain containing 2##NM_018023|YEATS2|55689|YEATS domain containing 2	0.0	
chr7	18392091	18392219	reg1011935.p1	9.761	+	AK097178 TSC_hg19_v1_chr7_+_18330071	-62096	+	TSC_hg19_v1_chr7_+_18126583 AK304298 NM_001204144	-265564	+	BC062797 BC005309 M57423 NM_175886	-324690	-	TSC_hg19_v1_chr7_+_18535361 BC092441 BC150328 AB018287 AJ459808 BC152405 NM_001204145 NM_001204146 NM_014707 NM_178423 AK297404 AK316109 AY429540	143244	+	CR749550 EU832154 EU832248 TSC_hg19_v1_chr7_+_18535882 NM_058176 NM_178425 AB385379 AY032737 AY032738 AY197371 EU832247 BC111735	143716	+	NM_001204147 NM_001204148 TSC_hg19_v1_chr7_+_18548932 AK304410	156768	+	AK097178|HDAC9|9734|histone deacetylase 9##AK304298|HDAC9|9734|histone deacetylase 9##NM_001204144|HDAC9|9734|histone deacetylase 9##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC150328|HDAC9|9734|histone deacetylase 9##AB018287|HDAC9|9734|histone deacetylase 9##AJ459808|HDAC9|9734|histone deacetylase 9##BC152405|HDAC9|9734|histone deacetylase 9##NM_001204145|HDAC9|9734|histone deacetylase 9##NM_001204146|HDAC9|9734|histone deacetylase 9##NM_014707|HDAC9|9734|histone deacetylase 9##NM_178423|HDAC9|9734|histone deacetylase 9##AK297404|HDAC9|9734|histone deacetylase 9##AK316109|HDAC9|9734|histone deacetylase 9##AY429540|HDAC9|9734|histone deacetylase 9##CR749550|HDAC9|9734|histone deacetylase 9##EU832154|HDAC9|9734|histone deacetylase 9##EU832248|HDAC9|9734|histone deacetylase 9##NM_058176|HDAC9|9734|histone deacetylase 9##NM_178425|HDAC9|9734|histone deacetylase 9##AY032737|HDAC9|9734|histone deacetylase 9##AY032738|HDAC9|9734|histone deacetylase 9##AY197371|HDAC9|9734|histone deacetylase 9##EU832247|HDAC9|9734|histone deacetylase 9##BC111735|HDAC9|9734|histone deacetylase 9##NM_001204147|HDAC9|9734|histone deacetylase 9##NM_001204148|HDAC9|9734|histone deacetylase 9##AK304410|HDAC9|9734|histone deacetylase 9	0.771927	CTCF.p2:-25:0.772
chrX	56753162	56753280	reg1012898.p1	9.761	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-163170	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-494311	+	TSC_hg19_v1_chrX_+_55744181 NM_006064 NM_016656 AL831926 AK289407 BC034726 X90530	-1009033	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	2470	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	268750	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	394707	-	NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##NM_006064|RRAGB|10325|Ras-related GTP binding B##NM_016656|RRAGB|10325|Ras-related GTP binding B##AL831926|RRAGB|10325|Ras-related GTP binding B##AK289407|RRAGB|10325|Ras-related GTP binding B##BC034726|RRAGB|10325|Ras-related GTP binding B##X90530|RRAGB|10325|Ras-related GTP binding B##BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B	0.994092	CTCF.p2:11:0.994
chr17_ctg5_hap1	787603	787739	reg1011948.p2	9.760	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.998858	CTCF.p2:5:0.999
chr2	180990346	180990493	reg1012403.p1	9.760	+	BC031216 NM_020943 TSC_hg19_v1_chr2_-_180871834 AK025635 BC057826	-118605	-	TSC_hg19_v1_chr2_-_180726110 NM_152520	-264254	-	BC092423 TSC_hg19_v1_chr2_-_180726080	-264346	-	TSC_hg19_v1_chr2_+_181845341 NM_182678 NM_006357	854806	+	TSC_hg19_v1_chr2_+_181845369 BC092407	854951	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	855224	+	BC031216|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##NM_020943|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##AK025635|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##BC057826|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##NM_152520|ZNF385B|151126|zinc finger protein 385B##BC092423|ZNF385B|151126|zinc finger protein 385B##NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	0.244886	CTCF.p2:-3:0.245
chr5	145205383	145205502	reg1012006.p2	9.760	+	AK292477 CR749266 NM_020768	-1655027	+	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	-1655196	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	-1655266	-	TSC_hg19_v1_chr5_-_145214906 BC028175 AK095695 AK125215 NM_182960 NM_205846 BC012033 NM_138492	9446	-	NM_001080516	47088	-	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	110729	+	AK292477|KCTD16|57528|potassium channel tetramerisation domain containing 16##CR749266|KCTD16|57528|potassium channel tetramerisation domain containing 16##NM_020768|KCTD16|57528|potassium channel tetramerisation domain containing 16##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC028175|PRELID2|153768|PRELI domain containing 2##AK095695|PRELID2|153768|PRELI domain containing 2##AK125215|PRELID2|153768|PRELI domain containing 2##NM_182960|PRELID2|153768|PRELI domain containing 2##NM_205846|PRELID2|153768|PRELI domain containing 2##BC012033|PRELID2|153768|PRELI domain containing 2##NM_138492|PRELID2|153768|PRELI domain containing 2##NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2	0.985176	CTCF.p2:7:0.985
chr7	12529879	12529990	reg1011796.p2	9.760	+	NM_001135924	-86083	-	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	-86402	-	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	-279009	+	AB067492 NM_001112706 AK290363 AK075123 TSC_hg19_v1_chr7_+_12610346 BC021090 AB590413 DQ892033 DQ895224 AF276507	80373	+	AK027778 NM_033128	99213	+	TSC_hg19_v1_chr7_+_12726499 NM_001037164 NM_212460 BC039123 BC001111 BC003027	196552	+	NM_001135924|VWDE|221806|von Willebrand factor D and EGF domains##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains##NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AB067492|SCIN|85477|scinderin##NM_001112706|SCIN|85477|scinderin##AK290363|SCIN|85477|scinderin##AK075123|SCIN|85477|scinderin##BC021090|SCIN|85477|scinderin##DQ892033|SCIN|85477|scinderin##DQ895224|SCIN|85477|scinderin##AF276507|SCIN|85477|scinderin##AK027778|SCIN|85477|scinderin##NM_033128|SCIN|85477|scinderin##NM_001037164|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_212460|ARL4A|10124|ADP-ribosylation factor-like 4A##BC039123|ARL4A|10124|ADP-ribosylation factor-like 4A##BC001111|ARL4A|10124|ADP-ribosylation factor-like 4A##BC003027|ARL4A|10124|ADP-ribosylation factor-like 4A	0.981507	CTCF.p2:-3:0.982
chr12	108628088	108628200	reg1012650.p1	9.759	+	BC110330 AB018332 NM_014653	-104657	+	AY238895 NM_203436	-459983	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-473143	-	NM_001142345	86294	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	104940	-	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	280938	+	BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing	0.024264	
chr3	133537821	133537935	reg1010454.p1	9.759	+	AF086914 TSC_hg19_v1_chr3_+_133524688 AF141882 AK027525 AB464203 CU688042 BC065299	-13197	+	TSC_hg19_v1_chr3_+_133524658 AK075531 BC063001	-13228	+	NM_021203	-35002	+	AK295451 AF498940 BT007263 AB385529 EU832725 TSC_hg19_v1_chr3_-_133614324	76432	-	TSC_hg19_v1_chr3_-_133614642 BC078662 AK312378 AF166492 BC002510 NM_016577	76704	-	AK025826 AK225383 BC051274 BC064502 BC082257 NM_025041	110708	-	AF086914|SRPRB|58477|signal recognition particle receptor, B subunit##AF141882|SRPRB|58477|signal recognition particle receptor, B subunit##AK027525|SRPRB|58477|signal recognition particle receptor, B subunit##BC065299|SRPRB|58477|signal recognition particle receptor, B subunit##AK075531|SRPRB|58477|signal recognition particle receptor, B subunit##BC063001|SRPRB|58477|signal recognition particle receptor, B subunit##NM_021203|SRPRB|58477|signal recognition particle receptor, B subunit##AK295451|RAB6B|51560|RAB6B, member RAS oncogene family##AF498940|RAB6B|51560|RAB6B, member RAS oncogene family##BT007263|RAB6B|51560|RAB6B, member RAS oncogene family##EU832725|RAB6B|51560|RAB6B, member RAS oncogene family##BC078662|RAB6B|51560|RAB6B, member RAS oncogene family##AK312378|RAB6B|51560|RAB6B, member RAS oncogene family##AF166492|RAB6B|51560|RAB6B, member RAS oncogene family##BC002510|RAB6B|51560|RAB6B, member RAS oncogene family##NM_016577|RAB6B|51560|RAB6B, member RAS oncogene family##AK025826|C3orf36|80111|chromosome 3 open reading frame 36##AK225383|C3orf36|80111|chromosome 3 open reading frame 36##BC051274|C3orf36|80111|chromosome 3 open reading frame 36##BC064502|C3orf36|80111|chromosome 3 open reading frame 36##BC082257|C3orf36|80111|chromosome 3 open reading frame 36##NM_025041|C3orf36|80111|chromosome 3 open reading frame 36	0.999742	CTCF.p2:-12:1.000
chr6	150045089	150045231	reg1013077.p1	9.759	+	AF104413 NM_004690	-5769	-	TSC_hg19_v1_chr6_-_150039235 BC002767	-5931	-	BC015665 TSC_hg19_v1_chr6_-_150039204	-5978	-	AK023349 TSC_hg19_v1_chr6_-_150057707	12523	-	AM392678 BC065028 CU688006 AK304244 AF514997 TSC_hg19_v1_chr6_-_150067659 AK301027 BX647097 AK074311 AK095994 BX538215 NM_198887 AK304505	22506	-	TSC_hg19_v1_chr6_+_150070835 NM_001252049 NM_001252050 NM_001252051 NM_001252052 NM_001252053 NM_005389	25667	+	AF104413|LATS1|9113|LATS, large tumor suppressor, homolog 1 (Drosophila)##NM_004690|LATS1|9113|LATS, large tumor suppressor, homolog 1 (Drosophila)##BC002767|LATS1|9113|LATS, large tumor suppressor, homolog 1 (Drosophila)##BC015665|LATS1|9113|LATS, large tumor suppressor, homolog 1 (Drosophila)##AK023349|NUP43|348995|nucleoporin 43kDa##AM392678|NUP43|348995|nucleoporin 43kDa##BC065028|NUP43|348995|nucleoporin 43kDa##AK304244|NUP43|348995|nucleoporin 43kDa##AF514997|NUP43|348995|nucleoporin 43kDa##AK301027|NUP43|348995|nucleoporin 43kDa##BX647097|NUP43|348995|nucleoporin 43kDa##AK074311|NUP43|348995|nucleoporin 43kDa##AK095994|NUP43|348995|nucleoporin 43kDa##NM_198887|NUP43|348995|nucleoporin 43kDa##AK304505|NUP43|348995|nucleoporin 43kDa##NM_001252049|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252050|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252051|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252052|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252053|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_005389|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase	0.709498	CTCF.p2:0:0.709
chr9	73616817	73616966	reg1012882.p1	9.759	+	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	-132931	-	D31716 S72504 NM_001206	-587336	-	AB451404 CU686806 AB464604 EU446889 TSC_hg19_v1_chr9_-_73028875 BC074879 BC074880 AK313631 BC069431	-588216	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	119645	-	AL136545 TSC_hg19_v1_chr9_-_74061901	444992	-	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	766687	-	BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##D31716|KLF9|687|Kruppel-like factor 9##S72504|KLF9|687|Kruppel-like factor 9##NM_001206|KLF9|687|Kruppel-like factor 9##AB451404|KLF9|687|Kruppel-like factor 9##EU446889|KLF9|687|Kruppel-like factor 9##BC074879|KLF9|687|Kruppel-like factor 9##BC074880|KLF9|687|Kruppel-like factor 9##AK313631|KLF9|687|Kruppel-like factor 9##BC069431|KLF9|687|Kruppel-like factor 9##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2	0.991816	CTCF.p2:4:0.992
chr11	29350617	29350750	reg1011925.p2	9.758	+	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-1218830	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-1220805	+	TSC_hg19_v1_chr11_-_28129704 BC026090 NM_031217	-1220960	-	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	687848	-	NM_000510 NM_001018080	901879	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	993969	+	BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##BC026090|KIF18A|81930|kinesin family member 18A##NM_031217|KIF18A|81930|kinesin family member 18A##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46	0.95337	CTCF.p2:9:0.953
chr1	156426322	156426442	reg1011929.p1	9.757	+	NM_006365 U49857 BC059943 BC107686 BC050448 TSC_hg19_v1_chr1_-_156399219 AK095626 BC054045	-27106	-	AF193807 AK290840 AK294641 AK303799 AK303814 AY139092 AY139093 NM_020407 AK308556 TSC_hg19_v1_chr1_+_156339022 AK054780 BC065218	-87361	+	TSC_hg19_v1_chr1_-_156308103 NM_001008800 NM_005998	-118230	-	BC040949 TSC_hg19_v1_chr1_-_156460409	34021	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	44136	-	TSC_hg19_v1_chr1_-_156470563 BC018985 BC032479 AB210005 BC064988	44168	-	NM_006365|C1orf61|10485|chromosome 1 open reading frame 61##U49857|C1orf61|10485|chromosome 1 open reading frame 61##BC059943|C1orf61|10485|chromosome 1 open reading frame 61##BC107686|C1orf61|10485|chromosome 1 open reading frame 61##BC050448|C1orf61|10485|chromosome 1 open reading frame 61##AK095626|C1orf61|10485|chromosome 1 open reading frame 61##BC054045|C1orf61|10485|chromosome 1 open reading frame 61##AF193807|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK290840|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK294641|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303799|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303814|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139092|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139093|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_020407|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK308556|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK054780|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##BC065218|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_001008800|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_005998|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##BC040949|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D##BC018985|MEF2D|4209|myocyte enhancer factor 2D##BC032479|MEF2D|4209|myocyte enhancer factor 2D##AB210005|MEF2D|4209|myocyte enhancer factor 2D	0.0	
chr20	43376267	43376384	reg1013352.p1	9.757	+	AF257081 NM_022358 BC093874 BC143282 AF294350 AF294351 AF336342	-1806	+	TSC_hg19_v1_chr20_+_43344010 AK313853 BC064379 AF083500 AF074604 AY358915 CU687868	-32308	+	NM_003881 BC017782 TSC_hg19_v1_chr20_+_43343953	-32405	+	AK126807 BC104191 BC104190 BC112985 AY326954 NM_001205317 NM_182970	62604	-	TSC_hg19_v1_chr20_+_43514345 NM_003404 NM_139323 AK292717 BC001359	138019	+	TSC_hg19_v1_chr20_+_43514390 AL834170 AB209759	138045	+	AF257081|KCNK15|60598|potassium channel, subfamily K, member 15##NM_022358|KCNK15|60598|potassium channel, subfamily K, member 15##BC093874|KCNK15|60598|potassium channel, subfamily K, member 15##BC143282|KCNK15|60598|potassium channel, subfamily K, member 15##AF294350|KCNK15|60598|potassium channel, subfamily K, member 15##AF294351|KCNK15|60598|potassium channel, subfamily K, member 15##AF336342|KCNK15|60598|potassium channel, subfamily K, member 15##AK313853|WISP2|8839|WNT1 inducible signaling pathway protein 2##BC064379|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF083500|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF074604|WISP2|8839|WNT1 inducible signaling pathway protein 2##AY358915|WISP2|8839|WNT1 inducible signaling pathway protein 2##NM_003881|WISP2|8839|WNT1 inducible signaling pathway protein 2##BC017782|WISP2|8839|WNT1 inducible signaling pathway protein 2##AK126807|RIMS4|140730|regulating synaptic membrane exocytosis 4##BC104191|RIMS4|140730|regulating synaptic membrane exocytosis 4##BC104190|RIMS4|140730|regulating synaptic membrane exocytosis 4##BC112985|RIMS4|140730|regulating synaptic membrane exocytosis 4##AY326954|RIMS4|140730|regulating synaptic membrane exocytosis 4##NM_001205317|RIMS4|140730|regulating synaptic membrane exocytosis 4##NM_182970|RIMS4|140730|regulating synaptic membrane exocytosis 4##NM_003404|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##NM_139323|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AK292717|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##BC001359|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AL834170|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AB209759|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	0.995958	CTCF.p2:7:0.996
chr4	38862588	38862710	reg1014043.p1	9.757	+	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	-4221	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	-56230	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	-78050	-	TSC_hg19_v1_chr4_+_38869390 NM_138389 AK304050 AK296859 AK292831 BC040452	6742	+	BC030803 BC060512 AK026888 NM_024943	171361	-	TSC_hg19_v1_chr4_+_39046535 NM_001007075 NM_001171654 BC053860 AB208820	183789	+	AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##NM_138389|FAM114A1|92689|family with sequence similarity 114, member A1##AK304050|FAM114A1|92689|family with sequence similarity 114, member A1##AK296859|FAM114A1|92689|family with sequence similarity 114, member A1##AK292831|FAM114A1|92689|family with sequence similarity 114, member A1##BC040452|FAM114A1|92689|family with sequence similarity 114, member A1##BC030803|TMEM156|80008|transmembrane protein 156##BC060512|TMEM156|80008|transmembrane protein 156##AK026888|TMEM156|80008|transmembrane protein 156##NM_024943|TMEM156|80008|transmembrane protein 156##NM_001007075|KLHL5|51088|kelch-like 5 (Drosophila)##NM_001171654|KLHL5|51088|kelch-like 5 (Drosophila)##BC053860|KLHL5|51088|kelch-like 5 (Drosophila)##AB208820|KLHL5|51088|kelch-like 5 (Drosophila)	0.99864	CTCF.p2:2:0.999
chr1	2703312	2703403	reg1009088.p1	9.756	+	AK093058 AX747891 NM_033467 TSC_hg19_v1_chr1_-_2564497	-138892	-	TSC_hg19_v1_chr1_+_2518534 AK094901	-184843	+	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	-185169	+	NM_001242672	2872	-	NM_080431 AK058153 AK314500 BC029499	234698	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	282419	+	AK093058|MMEL1|79258|membrane metallo-endopeptidase-like 1##NM_033467|MMEL1|79258|membrane metallo-endopeptidase-like 1##AK094901|FAM213B|127281|family with sequence similarity 213, member B##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B##NM_001242672|TTC34|100287898|tetratricopeptide repeat domain 34##NM_080431|ACTRT2|140625|actin-related protein T2##AK058153|ACTRT2|140625|actin-related protein T2##AK314500|ACTRT2|140625|actin-related protein T2##BC029499|ACTRT2|140625|actin-related protein T2##NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16	0.999786	CTCF.p2:15:1.000
chr1	9241454	9241626	reg1012224.p1	9.756	+	DQ892804 DQ896051 TSC_hg19_v1_chr1_-_9189169 AK022194 AK292888 AK304154 AY768808 NM_024980 BC094733 BC018691	-52319	-	TSC_hg19_v1_chr1_-_9129695 M55531 AK290398 AK294368 NM_001135585 NM_003039	-111764	-	TSC_hg19_v1_chr1_-_9129644 AK289849 BC001692 BC001820 AK295785 BC035878	-111899	-	TSC_hg19_v1_chr1_+_9294832 BC081559	53275	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	53377	+	CR749282 TSC_hg19_v1_chr1_+_9299950	58398	+	DQ892804|GPR157|80045|G protein-coupled receptor 157##DQ896051|GPR157|80045|G protein-coupled receptor 157##AK022194|GPR157|80045|G protein-coupled receptor 157##AK292888|GPR157|80045|G protein-coupled receptor 157##AK304154|GPR157|80045|G protein-coupled receptor 157##AY768808|GPR157|80045|G protein-coupled receptor 157##NM_024980|GPR157|80045|G protein-coupled receptor 157##BC018691|GPR157|80045|G protein-coupled receptor 157##M55531|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK290398|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK294368|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_001135585|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_003039|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK289849|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001692|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001820|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK295785|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC035878|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##CR749282|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	0.995273	CTCF.p2:-26:0.995
chr1	112289983	112290110	reg1013144.p1	9.755	+	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	-8091	-	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	-127579	+	BC041707 BC064411 NM_001081976	-183467	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	8173	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	8389	-	TSC_hg19_v1_chr1_+_112298524 AK301697 AK001506 BC031062 BC011556 AF106019 AF155803 AK314312 DQ892249 DQ895449 CU679958	8503	+	AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B##NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B##AK301697|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK001506|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC031062|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC011556|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF106019|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF155803|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK314312|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ892249|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ895449|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	0.898284	CTCF.p2:1:0.371	CTCF.p2:48:0.527
chr15	85789892	85790021	reg1014851.p1	9.755	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-123638	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-264630	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-264719	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	133935	+	AF127481 NM_144767	430311	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	548141	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	0.024054	
chr19	12787292	12787411	reg1011105.p2	9.755	+	NM_032332 TSC_hg19_v1_chr19_+_12780571 AK223195 BC005870 CU675171	-6792	+	AF078861 AF151898 NM_016145	-6895	-	TSC_hg19_v1_chr19_-_12780240 BC001192 AK311944 AF059620 BC042919 BC061912	-7124	-	NM_001206974	4673	-	TSC_hg19_v1_chr19_-_12792673 EU831477 EU831564 CU674162 U26266 U32178 AY336090 L39068 BC000333 U40579 BC014016 U79262	5275	-	TSC_hg19_v1_chr19_-_12792697 AK291553 AK304780	5335	-	NM_032332|WDR83|84292|WD repeat domain 83##AK223195|WDR83|84292|WD repeat domain 83##BC005870|WDR83|84292|WD repeat domain 83##AF078861|WDR83OS|51398|WD repeat domain 83 opposite strand##AF151898|WDR83OS|51398|WD repeat domain 83 opposite strand##NM_016145|WDR83OS|51398|WD repeat domain 83 opposite strand##BC001192|WDR83OS|51398|WD repeat domain 83 opposite strand##AK311944|WDR83OS|51398|WD repeat domain 83 opposite strand##AF059620|WDR83OS|51398|WD repeat domain 83 opposite strand##BC042919|WDR83OS|51398|WD repeat domain 83 opposite strand##BC061912|WDR83OS|51398|WD repeat domain 83 opposite strand##NM_001206974|DHPS|1725|deoxyhypusine synthase##EU831477|DHPS|1725|deoxyhypusine synthase##EU831564|DHPS|1725|deoxyhypusine synthase##U26266|DHPS|1725|deoxyhypusine synthase##U32178|DHPS|1725|deoxyhypusine synthase##AY336090|DHPS|1725|deoxyhypusine synthase##L39068|DHPS|1725|deoxyhypusine synthase##BC000333|DHPS|1725|deoxyhypusine synthase##U40579|DHPS|1725|deoxyhypusine synthase##BC014016|DHPS|1725|deoxyhypusine synthase##U79262|DHPS|1725|deoxyhypusine synthase##AK291553|DHPS|1725|deoxyhypusine synthase##AK304780|DHPS|1725|deoxyhypusine synthase	0.96737	CTCF.p2:-14:0.955
chr2	54730483	54730596	reg1013600.p1	9.755	+	TSC_hg19_v1_chr2_+_54684338 BC032061	-46172	+	TSC_hg19_v1_chr2_+_54683463 NM_003128 AB371586 AB209748	-46927	+	AK097617 NM_001100396 BC126244 BC126246 BC144191 BC144192 BC031669	-172451	+	TSC_hg19_v1_chr2_+_54785519 AF327441 NM_178313 BC137282 BC137283	55026	+	NM_001039753	221609	+	TSC_hg19_v1_chr2_-_55199899 BC131571	469369	-	BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AK097617|C2orf73|129852|chromosome 2 open reading frame 73##NM_001100396|C2orf73|129852|chromosome 2 open reading frame 73##BC126244|C2orf73|129852|chromosome 2 open reading frame 73##BC126246|C2orf73|129852|chromosome 2 open reading frame 73##BC144191|C2orf73|129852|chromosome 2 open reading frame 73##BC144192|C2orf73|129852|chromosome 2 open reading frame 73##BC031669|C2orf73|129852|chromosome 2 open reading frame 73##AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_001039753|EML6|400954|echinoderm microtubule associated protein like 6	0.035201	
chr5	90005286	90005419	reg1008438.p1	9.755	+	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	-150738	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-179986	-	NM_006467 AK295434 U93868	-234650	+	AK091866 TSC_hg19_v1_chr5_-_90610220	604893	-	TSC_hg19_v1_chr5_+_90676181 BC043415	670810	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	673780	-	AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3	0.942484	CTCF.p2:-7:0.942
chr1	117215309	117215430	reg1008001.p1	9.754	+	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	-4986	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	-101692	-	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	-101754	-	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	81738	+	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	237273	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	329036	+	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule	0.074554	
chr17	39705610	39705741	reg1006655.p2	9.754	+	TSC_hg19_v1_chr17_-_39684642 NM_002276	-21036	-	CU679705 DQ892179 DQ895373 AB527586 Y00503 BC084574 BC002539 BC007628 BC010409 TSC_hg19_v1_chr17_-_39684561 AK313261 BC067744	-21145	-	BT007261 CU678086 DQ892990 DQ896238 AB527603 BC110649 BC002641 X07696 TSC_hg19_v1_chr17_-_39675141 AK304059 NM_002275	-30502	-	BC121170 NM_000226 S69510 Z29074	22631	-	BT007186 AB527765 DQ890733 DQ892997 DQ893905 BC042437 BC002690 BC019097 BC094830 AK309280 NM_000526	37440	-	S79867 DQ891307 DQ896818 AF061812 BC039169 AK290853 AK309296 AK309278 NM_005557	63333	-	NM_002276|KRT19|3880|keratin 19##DQ892179|KRT19|3880|keratin 19##DQ895373|KRT19|3880|keratin 19##Y00503|KRT19|3880|keratin 19##BC084574|KRT19|3880|keratin 19##BC002539|KRT19|3880|keratin 19##BC007628|KRT19|3880|keratin 19##BC010409|KRT19|3880|keratin 19##AK313261|KRT19|3880|keratin 19##BC067744|KRT19|3880|keratin 19##BT007261|KRT15|3866|keratin 15##DQ892990|KRT15|3866|keratin 15##DQ896238|KRT15|3866|keratin 15##BC110649|KRT15|3866|keratin 15##BC002641|KRT15|3866|keratin 15##X07696|KRT15|3866|keratin 15##AK304059|KRT15|3866|keratin 15##NM_002275|KRT15|3866|keratin 15##BC121170|KRT9|3857|keratin 9##NM_000226|KRT9|3857|keratin 9##S69510|KRT9|3857|keratin 9##Z29074|KRT9|3857|keratin 9##BT007186|KRT14|3861|keratin 14##DQ890733|KRT14|3861|keratin 14##DQ892997|KRT14|3861|keratin 14##DQ893905|KRT14|3861|keratin 14##BC042437|KRT14|3861|keratin 14##BC002690|KRT14|3861|keratin 14##BC019097|KRT14|3861|keratin 14##BC094830|KRT14|3861|keratin 14##NM_000526|KRT14|3861|keratin 14##S79867|KRT16|3868|keratin 16##DQ891307|KRT16|3868|keratin 16##DQ896818|KRT16|3868|keratin 16##AF061812|KRT16|3868|keratin 16##BC039169|KRT16|3868|keratin 16##AK290853|KRT16|3868|keratin 16##NM_005557|KRT16|3868|keratin 16	0.952195	CTCF.p2:-1:0.952
chr22	23969771	23969899	reg1015160.p1	9.754	+	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	-47400	-	TSC_hg19_v1_chr22_-_23744738 AK056130 AK092581 AX747609 AK092530 AX747585	-225092	-	TSC_hg19_v1_chr22_+_23540316 X14677 X14675	-429430	+	BC056888 AL080197 BC063390 AK310349 NM_016449	4661	-	AY101396 NM_153615	63212	+	TSC_hg19_v1_chr22_-_24059494 BC033757	89630	-	DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##AK056130|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092581|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092530|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43##AY101396|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4##NM_153615|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4	0.835139	CTCF.p2:-6:0.835
chr2	85527551	85527697	reg1013482.p1	9.754	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	-166965	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	-329133	+	TSC_hg19_v1_chr2_+_85198299 NM_020122	-329340	+	TSC_hg19_v1_chr2_-_85555100 CU678967 EU176441 EU176775 X94333 BC028219	27448	-	AK223063 TSC_hg19_v1_chr2_-_85555113 AK126465 AK222829 BX640733 AK312479 BC008461 AF027515 AF027516 U62390	27506	-	TSC_hg19_v1_chr2_-_85555373 BX640868 NM_001206840 NM_001206841 NM_001206844 NM_006464	27764	-	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##EU176441|TGOLN2|10618|trans-golgi network protein 2##EU176775|TGOLN2|10618|trans-golgi network protein 2##X94333|TGOLN2|10618|trans-golgi network protein 2##BC028219|TGOLN2|10618|trans-golgi network protein 2##AK223063|TGOLN2|10618|trans-golgi network protein 2##AK126465|TGOLN2|10618|trans-golgi network protein 2##AK222829|TGOLN2|10618|trans-golgi network protein 2##BX640733|TGOLN2|10618|trans-golgi network protein 2##AK312479|TGOLN2|10618|trans-golgi network protein 2##BC008461|TGOLN2|10618|trans-golgi network protein 2##AF027515|TGOLN2|10618|trans-golgi network protein 2##AF027516|TGOLN2|10618|trans-golgi network protein 2##U62390|TGOLN2|10618|trans-golgi network protein 2##BX640868|TGOLN2|10618|trans-golgi network protein 2##NM_001206840|TGOLN2|10618|trans-golgi network protein 2##NM_001206841|TGOLN2|10618|trans-golgi network protein 2##NM_001206844|TGOLN2|10618|trans-golgi network protein 2##NM_006464|TGOLN2|10618|trans-golgi network protein 2	0.999918	CTCF.p2:22:1.000
chr10	43700503	43700621	reg1005069.p1	9.753	+	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	-66620	+	TSC_hg19_v1_chr10_+_43572516 NM_020630 NM_020975 BC003072 BC004257 X15262 AK291807 AB384817 CU678360 CU678648 Y12528	-127959	+	TSC_hg19_v1_chr10_+_43278248 AK308420 BC043345	-422312	+	BC022548 NM_145313	61804	-	BC054876 AY358584 NM_001184963 NM_173160	166528	+	TSC_hg19_v1_chr10_-_43892200 NM_001098208	191657	-	AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_020630|RET|5979|ret proto-oncogene##NM_020975|RET|5979|ret proto-oncogene##BC003072|RET|5979|ret proto-oncogene##BC004257|RET|5979|ret proto-oncogene##X15262|RET|5979|ret proto-oncogene##AK291807|RET|5979|ret proto-oncogene##Y12528|RET|5979|ret proto-oncogene##AK308420|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC043345|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC022548|RASGEF1A|221002|RasGEF domain family, member 1A##NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A##BC054876|FXYD4|53828|FXYD domain containing ion transport regulator 4##AY358584|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001184963|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_173160|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F	0.054645	
chr16	80031291	80031406	reg1013179.p1	9.753	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-396733	-	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-1897893	+	NM_001244755	-1968363	+	AF125108 NM_130897 BC054892 BC035232	543540	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	806699	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	1008736	+	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N	0.978552	CTCF.p2:-3:0.979
chr5	157422042	157422176	reg1012985.p1	9.753	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-136019	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-237729	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-251369	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	1104348	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	1104633	-	AK304228 NM_001199382	1212539	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.626924	CTCF.p2:0:0.627
chr5	7762531	7762640	reg1011074.p1	9.752	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	-366317	+	AK308405 NM_001171806 AK303516	-1016463	+	NM_001171805 NM_006999 AF089896 BC084567	-1047835	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	88674	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	106547	-	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	106674	+	NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase	0.0	
chr19	48018790	48018904	reg1012703.p1	9.751	+	TSC_hg19_v1_chr19_-_48018321 BC028234 AK098401 NM_003827	-432	-	BC007432 TSC_hg19_v1_chr19_-_48018290 AK292244 AK310114 AY927608 BC001165 AY927609 BC091511	-551	-	TSC_hg19_v1_chr19_-_48018275 BT019568 U39412 AK308633 AK310185	-628	-	NM_001101419	40265	-	TSC_hg19_v1_chr19_+_48111441 BC032065 NM_015711	92597	+	NM_014601 TSC_hg19_v1_chr19_+_48216678 AK315548 AK074701 AK097126 AK097228 AK296907 AK298067 BC014445	197803	+	BC028234|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##AK098401|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##NM_003827|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##BC007432|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##AK292244|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##AK310114|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##BC001165|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##AY927609|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##BC091511|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##BT019568|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##U39412|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##AK308633|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##AK310185|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##NM_001101419|ZNF541|84215|zinc finger protein 541##BC032065|GLTSCR1|29998|glioma tumor suppressor candidate region gene 1##NM_015711|GLTSCR1|29998|glioma tumor suppressor candidate region gene 1##NM_014601|EHD2|30846|EH-domain containing 2##AK315548|EHD2|30846|EH-domain containing 2##AK074701|EHD2|30846|EH-domain containing 2##AK097126|EHD2|30846|EH-domain containing 2##AK097228|EHD2|30846|EH-domain containing 2##AK296907|EHD2|30846|EH-domain containing 2##AK298067|EHD2|30846|EH-domain containing 2##BC014445|EHD2|30846|EH-domain containing 2	0.232389	CTCF.p2:0:0.232
chr3	117438320	117438430	reg1011375.p2	9.751	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-1274002	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-1274044	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-2095956	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	1315158	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	1315308	-	AK097667 NM_152538 AK292387	1426522	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.021633	
chrX	39120816	39120962	reg1012533.p1	9.751	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-457349	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-457429	+	BC008908 NM_021242	-457817	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	835803	-	BC114220 NM_001123383 NM_001123384	915692	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	1319297	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.879986	CTCF.p2:-21:0.880
chrX	49605401	49605525	reg1012420.p1	9.751	+	NM_007003 AK312039 AF275258 AJ005894 AK092503 AX747575	-11536	+	BC004861 AF058989 NM_003785	-144882	-	NM_001040663 NM_001468 BC005363 BC036094 BC069470	-241824	+	NM_001145073	39006	+	TSC_hg19_v1_chrX_+_49687274 AK092049 NM_001127898 NM_001127899 AK056560	81783	+	NM_000084 AK308089 TSC_hg19_v1_chrX_+_49832243 AK290940	226782	+	NM_007003|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK312039|PAGE4|9506|P antigen family, member 4 (prostate associated)##AF275258|PAGE4|9506|P antigen family, member 4 (prostate associated)##AJ005894|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK092503|PAGE4|9506|P antigen family, member 4 (prostate associated)##BC004861|PAGE1|8712|P antigen family, member 1 (prostate associated)##AF058989|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_003785|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_001040663|GAGE1|2543|G antigen 1##NM_001468|GAGE1|2543|G antigen 1##BC005363|GAGE1|2543|G antigen 1##BC036094|GAGE1|2543|G antigen 1##BC069470|GAGE1|2543|G antigen 1##NM_001145073|USP27X|389856|ubiquitin specific peptidase 27, X-linked##AK092049|CLCN5|1184|chloride channel 5##NM_001127898|CLCN5|1184|chloride channel 5##NM_001127899|CLCN5|1184|chloride channel 5##AK056560|CLCN5|1184|chloride channel 5##NM_000084|CLCN5|1184|chloride channel 5##AK308089|CLCN5|1184|chloride channel 5##AK290940|CLCN5|1184|chloride channel 5	0.941284	CTCF.p2:-10:0.941
chr11	8028073	8028176	reg1012130.p1	9.750	+	NM_003754 TSC_hg19_v1_chr11_+_8008883 AK095574 AK289637 AK297621 AK291354 AK293826 BC000490 U94855 BC073753 AB590115 BT006894 CR456959 CU674238 DQ890766	-19242	+	AY154465 AY489192 NM_176821 BC104957	-43036	-	AB529269 NM_001003745 BC137031 BC137032	-67021	-	AK293528 TSC_hg19_v1_chr11_+_8040820	12681	+	NM_003320 U82467	32055	+	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	74675	+	NM_003754|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK095574|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK289637|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK297621|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK291354|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK293826|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##BC000490|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##U94855|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##BC073753|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##BT006894|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##CR456959|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##DQ890766|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AY154465|NLRP10|338322|NLR family, pyrin domain containing 10##AY489192|NLRP10|338322|NLR family, pyrin domain containing 10##NM_176821|NLRP10|338322|NLR family, pyrin domain containing 10##BC104957|NLRP10|338322|NLR family, pyrin domain containing 10##NM_001003745|OR10A3|26496|olfactory receptor, family 10, subfamily A, member 3##BC137031|OR10A3|26496|olfactory receptor, family 10, subfamily A, member 3##BC137032|OR10A3|26496|olfactory receptor, family 10, subfamily A, member 3##AK293528|TUB|7275|tubby homolog (mouse)##NM_003320|TUB|7275|tubby homolog (mouse)##U82467|TUB|7275|tubby homolog (mouse)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)	0.940297	CTCF.p2:-11:0.940
chr2	90276905	90276997	reg1011318.p1	9.750	+	TSC_hg19_v1_chr2_+_90211706 Z69013	-65233	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-199197	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-657098	-	TSC_hg19_v1_chr2_-_91847997 BC030764	1571052	-	AK097438 BC021716 NM_144705 AK296678 CU692394	5260299	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	5414531	+	BC070334|IGKC|3514|immunoglobulin kappa constant##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein	0.933043	CTCF.p2:7:0.933
chr3	113213062	113213172	reg1004170.p1	9.750	+	BC101582 BC113553 AK056472 NM_001164496 NM_018338	-52778	-	AY358328 NM_033254 AK309055	-281718	+	BC067743 TSC_hg19_v1_chr3_-_112738514 AK295954 AK293218 BC014673 NM_015412 CR749341	-474571	-	TSC_hg19_v1_chr3_-_113233690 AK296160	20569	-	AY099107 BC036951 TSC_hg19_v1_chr3_-_113234023 AK057966 AL832327 AL832148 NM_144718	20876	-	NM_017699	38100	+	BC101582|WDR52|55779|WD repeat domain 52##BC113553|WDR52|55779|WD repeat domain 52##AK056472|WDR52|55779|WD repeat domain 52##NM_001164496|WDR52|55779|WD repeat domain 52##NM_018338|WDR52|55779|WD repeat domain 52##AY358328|BOC|91653|Boc homolog (mouse)##NM_033254|BOC|91653|Boc homolog (mouse)##AK309055|BOC|91653|Boc homolog (mouse)##BC067743|C3orf17|25871|chromosome 3 open reading frame 17##AK295954|C3orf17|25871|chromosome 3 open reading frame 17##AK293218|C3orf17|25871|chromosome 3 open reading frame 17##BC014673|C3orf17|25871|chromosome 3 open reading frame 17##NM_015412|C3orf17|25871|chromosome 3 open reading frame 17##CR749341|C3orf17|25871|chromosome 3 open reading frame 17##AK296160|SPICE1|152185|spindle and centriole associated protein 1##AY099107|SPICE1|152185|spindle and centriole associated protein 1##BC036951|SPICE1|152185|spindle and centriole associated protein 1##AK057966|SPICE1|152185|spindle and centriole associated protein 1##AL832327|SPICE1|152185|spindle and centriole associated protein 1##AL832148|SPICE1|152185|spindle and centriole associated protein 1##NM_144718|SPICE1|152185|spindle and centriole associated protein 1##NM_017699|SIDT1|54847|SID1 transmembrane family, member 1	0.614912	CTCF.p2:23:0.615
chr4	140337371	140337502	reg1014787.p1	9.750	+	TSC_hg19_v1_chr4_-_140223626 AK023115 NM_001184987 NM_001184988 NM_001184989 NM_001184990	-113779	-	TSC_hg19_v1_chr4_+_140222680 NM_057175 BC039818 AJ314788 BC093928 BC104806 AB528041 AY112670 AK023387	-114625	+	AK314626 TSC_hg19_v1_chr4_+_140222652 AK304417 AF327722 AK023402 AY039242	-114794	+	TSC_hg19_v1_chr4_-_140374867 AK097885	37438	-	AL136904 NM_031296	37524	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	139997	-	AK023115|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184987|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184988|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184989|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184990|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_057175|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##BC039818|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AJ314788|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##BC093928|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##BC104806|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AY112670|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AK023387|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AK314626|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AK304417|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AF327722|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AK023402|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AY039242|NAA15|80155|N(alpha)-acetyltransferase 15, NatA auxiliary subunit##AL136904|RAB33B|83452|RAB33B, member RAS oncogene family##NM_031296|RAB33B|83452|RAB33B, member RAS oncogene family##AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7	1.156266	CTCF.p2:-5:0.999
chr9	9942917	9943039	reg1013383.p1	9.750	+	TSC_hg19_v1_chr9_+_8858136 AK094342	-1084845	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-1209059	-	TSC_hg19_v1_chr9_+_8713275 AY779046	-1229686	+	BC028038 NM_002839	669744	-	NM_000550 X51420 BC052608	2750447	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	2832038	+	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##AY779046|RPL18A|6142|ribosomal protein L18a##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150	0.99951	CTCF.p2:10:1.000
chrX	101014076	101014217	reg1014010.p1	9.750	+	BC052628 AB011084 BC012541 BX648494 TSC_hg19_v1_chrX_-_100914836 AK291342 NM_014782 NM_177949	-99307	-	NM_177948	-135796	+	TSC_hg19_v1_chrX_+_100878175 AK291225 NM_016607 NM_177947 BX647802 AF208859 AK222655 AB039669 BC005194 CR933656	-136005	+	AJ277654 AJ277655 AJ277656 AJ277657 AJ277658 NM_032946	98402	-	TSC_hg19_v1_chrX_-_101187001 AK094141 AK296520 NM_001011657	172870	-	NM_080390 AK312138 AF325115	366540	+	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2##AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2##BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2##BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2##AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2##NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2##NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2##NM_177948|ARMCX3|51566|armadillo repeat containing, X-linked 3##AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3##BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3##AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3##AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3##BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3##CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3##AJ277654|NXF5|55998|nuclear RNA export factor 5##AJ277655|NXF5|55998|nuclear RNA export factor 5##AJ277656|NXF5|55998|nuclear RNA export factor 5##AJ277657|NXF5|55998|nuclear RNA export factor 5##AJ277658|NXF5|55998|nuclear RNA export factor 5##NM_032946|NXF5|55998|nuclear RNA export factor 5##AK094141|ZMAT1|84460|zinc finger, matrin-type 1##AK296520|ZMAT1|84460|zinc finger, matrin-type 1##NM_001011657|ZMAT1|84460|zinc finger, matrin-type 1##NM_080390|TCEAL2|140597|transcription elongation factor A (SII)-like 2##AK312138|TCEAL2|140597|transcription elongation factor A (SII)-like 2##AF325115|TCEAL2|140597|transcription elongation factor A (SII)-like 2	0.619171	CTCF.p2:-12:0.619
chr2	233470927	233471072	reg1011045.p2	9.749	+	AK310565 NM_001243252	-233	+	TSC_hg19_v1_chr2_+_233415410 NM_004846 BC005874 AB209519 AK022518 AK303802 BC005392 BC021690 AF038957 AF047695 BC000360 AF068117 BC021226 CU676880	-55554	+	TSC_hg19_v1_chr2_-_233415301 BC035143	-55680	-	TSC_hg19_v1_chr2_+_233497966 AK293581	26971	+	NM_025202 TSC_hg19_v1_chr2_+_233498314 AK315442 BC035476 AK023674 BC002449 AB209715 BC004128 AF218006 BC071886 AB385018	27309	+	TSC_hg19_v1_chr2_+_233562019 NM_001103146 NM_001103147 NM_001103148 NM_015575	91010	+	AK310565|EFHD1|80303|EF-hand domain family, member D1##NM_001243252|EFHD1|80303|EF-hand domain family, member D1##NM_004846|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC005874|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AB209519|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AK022518|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AK303802|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC005392|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC021690|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AF038957|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AF047695|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC000360|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AF068117|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC021226|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC035143|TIGD1|200765|tigger transposable element derived 1##AK293581|EFHD1|80303|EF-hand domain family, member D1##NM_025202|EFHD1|80303|EF-hand domain family, member D1##AK315442|EFHD1|80303|EF-hand domain family, member D1##BC035476|EFHD1|80303|EF-hand domain family, member D1##AK023674|EFHD1|80303|EF-hand domain family, member D1##BC002449|EFHD1|80303|EF-hand domain family, member D1##AB209715|EFHD1|80303|EF-hand domain family, member D1##BC004128|EFHD1|80303|EF-hand domain family, member D1##AF218006|EFHD1|80303|EF-hand domain family, member D1##BC071886|EFHD1|80303|EF-hand domain family, member D1##NM_001103146|GIGYF2|26058|GRB10 interacting GYF protein 2##NM_001103147|GIGYF2|26058|GRB10 interacting GYF protein 2##NM_001103148|GIGYF2|26058|GRB10 interacting GYF protein 2##NM_015575|GIGYF2|26058|GRB10 interacting GYF protein 2	0.993306	CTCF.p2:0:0.993
chr3	104347167	104347277	reg1010682.p1	9.749	+	AY090780 NM_175056 BC143817	-2193355	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-2778848	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-2800262	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	738358	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	738600	+	CR749655 TSC_hg19_v1_chr3_-_105421064	1073832	-	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.880459	CTCF.p2:4:0.880
chrX	134246274	134246374	reg1010992.p1	9.749	+	AK123302 TSC_hg19_v1_chrX_-_134232743	-13589	-	BC008096 TSC_hg19_v1_chrX_-_134186208 BC071991 AL117556 BC000393 BC019300 NM_001078172 NM_001134321	-60195	-	TSC_hg19_v1_chrX_+_134166384 NM_001078171 Y13374 AF038168 AF052096 BC106076 BC002385 BC002410	-79964	+	AF520814 AY352211 NM_001031705 NM_017863	59426	-	AK091687 AX747129 NM_001185063 NM_007131 AK290215	183648	-	TSC_hg19_v1_chrX_-_134478038 AL831984 BC029787	231679	-	AK123302|LINC00087|644596|long intergenic non-protein coding RNA 87##BC008096|FAM127B|26071|family with sequence similarity 127, member B##BC071991|FAM127B|26071|family with sequence similarity 127, member B##AL117556|FAM127B|26071|family with sequence similarity 127, member B##BC000393|FAM127B|26071|family with sequence similarity 127, member B##BC019300|FAM127B|26071|family with sequence similarity 127, member B##NM_001078172|FAM127B|26071|family with sequence similarity 127, member B##NM_001134321|FAM127B|26071|family with sequence similarity 127, member B##NM_001078171|FAM127A|8933|family with sequence similarity 127, member A##Y13374|FAM127A|8933|family with sequence similarity 127, member A##AF038168|FAM127A|8933|family with sequence similarity 127, member A##AF052096|FAM127A|8933|family with sequence similarity 127, member A##BC106076|FAM127A|8933|family with sequence similarity 127, member A##BC002385|FAM127A|8933|family with sequence similarity 127, member A##BC002410|FAM127A|8933|family with sequence similarity 127, member A##AF520814|CXorf48|54967|chromosome X open reading frame 48##AY352211|CXorf48|54967|chromosome X open reading frame 48##NM_001031705|CXorf48|54967|chromosome X open reading frame 48##NM_017863|CXorf48|54967|chromosome X open reading frame 48##AK091687|ZNF75D|7626|zinc finger protein 75D##NM_001185063|ZNF75D|7626|zinc finger protein 75D##NM_007131|ZNF75D|7626|zinc finger protein 75D##AK290215|ZNF75D|7626|zinc finger protein 75D##AL831984|ZNF75D|7626|zinc finger protein 75D##BC029787|ZNF75D|7626|zinc finger protein 75D	0.87261	CTCF.p2:-2:0.873
chr1	162770156	162770264	reg1011949.p2	9.748	+	AK022929 AF145023 NM_016371 BC065246 AK290741 BC007068 AJ249179 AF098786 AY358962 BT007075 CU675533 CU688024 GQ129366 GQ129367	-9670	+	AK225063 TSC_hg19_v1_chr1_+_162602308	-167899	+	TSC_hg19_v1_chr1_+_162602235 NM_001014796 NM_006182 AK095975 AK225196 X74764 BX640899 BC052998 AK314388	-167964	+	BC040018 AK123573 NM_178550	68367	-	NM_001102445	268185	+	DQ346664 AK295540 NM_005613	268453	+	AK022929|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF145023|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##NM_016371|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC065246|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AK290741|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC007068|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AJ249179|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF098786|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AY358962|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BT007075|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129366|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129367|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AK225063|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_001014796|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_006182|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK095975|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK225196|DDR2|4921|discoidin domain receptor tyrosine kinase 2##X74764|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BX640899|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BC052998|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK314388|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BC040018|C1orf110|339512|chromosome 1 open reading frame 110##AK123573|C1orf110|339512|chromosome 1 open reading frame 110##NM_178550|C1orf110|339512|chromosome 1 open reading frame 110##NM_001102445|RGS4|5999|regulator of G-protein signaling 4##DQ346664|RGS4|5999|regulator of G-protein signaling 4##AK295540|RGS4|5999|regulator of G-protein signaling 4##NM_005613|RGS4|5999|regulator of G-protein signaling 4	0.276518	CTCF.p2:8:0.277
chr16	56985300	56985428	reg1012876.p1	9.748	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	-19223	+	NM_001010989 NM_001010990 NM_014685	-19617	+	AK315298 NM_000339 NM_001126107 NM_001126108 AK223133 X91220 U44128 AB463268	-86232	+	M30185 AK297699 NM_000078 TSC_hg19_v1_chr16_+_56995861 AK291586 BC025739 EU176529 CU693046 BT020064 M83573	10473	+	TSC_hg19_v1_chr16_+_57023474 AK097030	38096	+	AK074182 NM_032206	65621	+	AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK315298|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_000339|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126107|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126108|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK223133|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##X91220|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##U44128|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##M30185|CETP|1071|cholesteryl ester transfer protein, plasma##AK297699|CETP|1071|cholesteryl ester transfer protein, plasma##NM_000078|CETP|1071|cholesteryl ester transfer protein, plasma##AK291586|CETP|1071|cholesteryl ester transfer protein, plasma##BC025739|CETP|1071|cholesteryl ester transfer protein, plasma##EU176529|CETP|1071|cholesteryl ester transfer protein, plasma##BT020064|CETP|1071|cholesteryl ester transfer protein, plasma##M83573|CETP|1071|cholesteryl ester transfer protein, plasma##AK097030|NLRC5|84166|NLR family, CARD domain containing 5##AK074182|NLRC5|84166|NLR family, CARD domain containing 5##NM_032206|NLRC5|84166|NLR family, CARD domain containing 5	0.468365	CTCF.p2:8:0.468
chr15	57834534	57834642	reg1010560.p2	9.746	+	AK056673 AK307410 NM_001252335 NM_032866 TSC_hg19_v1_chr15_+_57668732 AY274808 BC030995 AY610514	-165871	+	TSC_hg19_v1_chr15_+_57511630 AK294991 AK304007 AK311359 AK308101 NM_207040 BX537967 AM393573	-322921	+	TSC_hg19_v1_chr15_+_57210977 M83233	-623588	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	49577	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	164298	+	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	164392	+	AK056673|CGNL1|84952|cingulin-like 1##AK307410|CGNL1|84952|cingulin-like 1##NM_001252335|CGNL1|84952|cingulin-like 1##NM_032866|CGNL1|84952|cingulin-like 1##AY274808|CGNL1|84952|cingulin-like 1##BC030995|CGNL1|84952|cingulin-like 1##AY610514|CGNL1|84952|cingulin-like 1##AK294991|TCF12|6938|transcription factor 12##AK304007|TCF12|6938|transcription factor 12##AK311359|TCF12|6938|transcription factor 12##AK308101|TCF12|6938|transcription factor 12##NM_207040|TCF12|6938|transcription factor 12##BX537967|TCF12|6938|transcription factor 12##AM393573|TCF12|6938|transcription factor 12##M83233|TCF12|6938|transcription factor 12##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M	0.999526	CTCF.p2:0:1.000
chr17	2689687	2689814	reg1011985.p2	9.746	+	AK124640 TSC_hg19_v1_chr17_+_2680496	-9327	+	NM_015229 TSC_hg19_v1_chr17_-_2615039	-74763	-	TSC_hg19_v1_chr17_+_2497263 BX538346 AK313078 L13385 BC064638	-192492	+	AJ628446 AJ628447 NM_001100398 NM_015085 TSC_hg19_v1_chr17_+_2699761 CR627427 BC140870 BC140871	10003	+	BC106876 NM_014566 AB529301	277177	-	AB529300 BC069552 BC106735 BC106736 NM_002548	306539	-	AK124640|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015229|KIAA0664|23277|KIAA0664##BX538346|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##AK313078|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13385|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BC064638|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##AJ628446|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AJ628447|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_001100398|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015085|RAP1GAP2|23108|RAP1 GTPase activating protein 2##CR627427|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140870|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140871|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC106876|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##NM_014566|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2	1.960535	CTCF.p2:-1:0.994	CTCF.p2:-82:0.966
chr18	20958912	20959028	reg1012603.p2	9.746	+	BC037218 NM_138375	-223182	+	EF028204 NM_001100619	-243244	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-445155	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	58901	-	AK057292 NM_003831	73816	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	74276	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.999079	CTCF.p2:14:0.999
chr3	155040978	155041108	reg1012631.p1	9.745	+	NM_007289 TSC_hg19_v1_chr3_+_154798107 BC101632 BC143465 BC101658	-242910	+	TSC_hg19_v1_chr3_+_154797924 NM_007288	-243112	+	TSC_hg19_v1_chr3_+_154797847 Y00811	-243171	+	NM_001130960 NM_001130961 TSC_hg19_v1_chr3_-_155394133 AK096620	353111	-	BC113950 NM_014996	380953	-	BC042198 AF115515 TSC_hg19_v1_chr3_-_155524068 BC064898 AK055701 NM_173657 AL832165 AK289890	483018	-	NM_007289|MME|4311|membrane metallo-endopeptidase##BC101632|MME|4311|membrane metallo-endopeptidase##BC143465|MME|4311|membrane metallo-endopeptidase##BC101658|MME|4311|membrane metallo-endopeptidase##NM_007288|MME|4311|membrane metallo-endopeptidase##Y00811|MME|4311|membrane metallo-endopeptidase##NM_001130960|PLCH1|23007|phospholipase C, eta 1##NM_001130961|PLCH1|23007|phospholipase C, eta 1##AK096620|PLCH1|23007|phospholipase C, eta 1##BC113950|PLCH1|23007|phospholipase C, eta 1##NM_014996|PLCH1|23007|phospholipase C, eta 1##BC042198|C3orf33|285315|chromosome 3 open reading frame 33##AF115515|C3orf33|285315|chromosome 3 open reading frame 33##BC064898|C3orf33|285315|chromosome 3 open reading frame 33##AK055701|C3orf33|285315|chromosome 3 open reading frame 33##NM_173657|C3orf33|285315|chromosome 3 open reading frame 33##AL832165|C3orf33|285315|chromosome 3 open reading frame 33##AK289890|C3orf33|285315|chromosome 3 open reading frame 33	0.10396	
chr15	60813113	60813215	reg1011408.p1	9.744	+	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-41890	-	AB587463 BC068065 BC009564 BC021114 BC052567 BC001388 BC013843 D00017 TSC_hg19_v1_chr15_-_60690186 AK222542 BX640598 AK297923 BC015834 BC023990 BC066955 BC093056 D28364 NM_001002857 NM_001002858 NM_001136015 NM_004039 AK309956 BC016774	-123003	-	TSC_hg19_v1_chr15_+_60296509 AK314075	-516615	+	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	71515	-	U04899 U04898 NM_002943 NM_134260	106521	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	708260	-	BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##BC068065|ANXA2|302|annexin A2##BC009564|ANXA2|302|annexin A2##BC021114|ANXA2|302|annexin A2##BC052567|ANXA2|302|annexin A2##BC001388|ANXA2|302|annexin A2##BC013843|ANXA2|302|annexin A2##D00017|ANXA2|302|annexin A2##AK222542|ANXA2|302|annexin A2##BX640598|ANXA2|302|annexin A2##AK297923|ANXA2|302|annexin A2##BC015834|ANXA2|302|annexin A2##BC023990|ANXA2|302|annexin A2##BC066955|ANXA2|302|annexin A2##BC093056|ANXA2|302|annexin A2##D28364|ANXA2|302|annexin A2##NM_001002857|ANXA2|302|annexin A2##NM_001002858|ANXA2|302|annexin A2##NM_001136015|ANXA2|302|annexin A2##NM_004039|ANXA2|302|annexin A2##BC016774|ANXA2|302|annexin A2##AK314075|FOXB1|27023|forkhead box B1##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A	0.995877	CTCF.p2:0:0.996
chr1	67998190	67998347	reg1012538.p1	9.744	+	TSC_hg19_v1_chr1_-_67896101 NM_001018067 NM_001018068 NM_001018069 NM_015640	-102151	-	BX647139 TSC_hg19_v1_chr1_-_67896097	-102171	-	TSC_hg19_v1_chr1_-_67896086 AK312256	-102183	-	TSC_hg19_v1_chr1_+_68150883 AK314991 NM_001199741 NM_001199742 NM_001924 M60974 BC011757 DQ008445 EF581092 EF614238	152642	+	TSC_hg19_v1_chr1_+_68151094 AB463698 AM393439 DQ893229 DQ896558	152866	+	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	299720	+	NM_001018067|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018068|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018069|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_015640|SERBP1|26135|SERPINE1 mRNA binding protein 1##BX647139|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK312256|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AM393439|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ893229|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ896558|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AK124028|LOC100289178|100289178|uncharacterized LOC100289178	0.996554	CTCF.p2:-6:0.997
chr19	47257151	47257294	reg1014211.p1	9.744	+	TSC_hg19_v1_chr19_-_47249708 NM_001039877 NM_013403	-7509	-	TSC_hg19_v1_chr19_-_47249688 AF212940 AB527410 BC034604	-7528	-	BC014278 AB209003 TSC_hg19_v1_chr19_-_47249674	-7567	-	TSC_hg19_v1_chr19_-_47288122 AK316546 AK299137 NM_001145145 AK055630	30878	-	AK293433 AK301661 NM_001145144	33320	-	AF334818 GQ919058 AB527629 CU674018 DQ892148 DQ895345 AF102826 TSC_hg19_v1_chr19_-_47291260 BC000062 AK125222	34051	-	NM_001039877|STRN4|29888|striatin, calmodulin binding protein 4##NM_013403|STRN4|29888|striatin, calmodulin binding protein 4##AF212940|STRN4|29888|striatin, calmodulin binding protein 4##BC034604|STRN4|29888|striatin, calmodulin binding protein 4##BC014278|STRN4|29888|striatin, calmodulin binding protein 4##AB209003|STRN4|29888|striatin, calmodulin binding protein 4##AK316546|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK299137|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145145|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK055630|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK293433|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK301661|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145144|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF334818|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##GQ919058|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ892148|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ895345|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF102826|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC000062|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK125222|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5	0.84547	CTCF.p2:7:0.845
chr2	110473072	110473182	reg1012230.p2	9.744	+	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	-101182	+	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	-101402	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	-101646	-	AL136868 NM_001037866 NM_001123363 NM_032260	77207	+	NM_005054 U64675	78838	+	BC094740 NM_001205288 NM_033514	182881	+	BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3	0.873243	CTCF.p2:8:0.873
chr2	42080952	42081099	reg1012527.p2	9.744	+	Y12878 Y12885 AK291696 BX537482 NM_001112802	-1341453	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	-1401803	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-1423594	-	AK124893 NM_001242815	99917	-	TSC_hg19_v1_chr2_+_42275160 NM_138370	194107	+	AB528999 TSC_hg19_v1_chr2_+_42275979	194936	+	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)	0.998984	CTCF.p2:-27:0.999
chr14	106873617	106873790	reg1011227.p1	9.743	+	AF460708 AF460709 AF460785 AY003807 AY003817 DQ454548 M33859 M33860 DQ454427 DQ454852 DQ454425 DQ454627 DQ454856 GU552743 DQ454416 DQ454458 GQ232904 GU552731 GU552736 AY003787 AF017463 GU552721 GU552724 GU552725 GU552726 GU552727 GU552728 GU552729 GU552730 AY003850 DQ454418 DQ454671 GQ232774 DQ454432 DQ454433 DQ454901 DQ454979 DQ454980 GQ232865 HM995239 JF810276 AY003855 DQ454422 DQ454434 DQ454622 DQ454870 DQ523887 HM116153 HM116169 HM116182 Z30552 Z30557 Z30561 Z30562 Z30573 Z30576 Z30578 Z30580 Z30581 Z30591 Z30599 Z30674 Z30675 Z30677 DQ454531 DQ454860 DQ454903 EU099089 AF004937 AY003796 AY003804 DQ454392 DQ454610 DQ454833 EU620002 FJ840008 FJ840011 FJ840012 FJ840020 FJ840055 FJ874002 FJ874054 FJ874065 FJ874072 FJ874075 FJ874095 HM116113 HM116114 HM116155 HM116159 HM116160 HM116168 HM116177 HM116195 HM116199 HM116226 AF017459 AF017460 EU619988 AJ487490 AY003825 AJ253061 EU350428 DQ454982 X75022 EF091922 EF175396 EF175402 EF407849 EF441754 GU358660 JF810277 GQ232847 GQ232867 GQ232891 GQ232893 GQ232895 GQ232896 GQ232900 GQ232901 GQ232902 DQ454645 EU099068 EU099071 AF103299 EU090244 EU099076 EU099098 HQ392881 HQ392885 HQ392917 AJ253080 EU099079 EU099096 EU099156 EU099191 EU099252 AJ253066 AM183974 AM183975 AM183976 AM183977 AM183978 AM183995 AF484411 AF103180 AJ253083 AF103278 EF624236 AJ240558 AJ253067 S79918 AJ253059 AJ253072 AJ253074 AJ253079 AJ253081 AJ253082 AJ253084 AJ253087 AJ253088 AJ253089 AJ253090 AJ253091 AJ253092 AJ253093 AJ253094 AJ253095 AJ253098 AJ253102 AJ253103 AJ253104 AJ253108 AJ253109 AJ253110 AJ253112 AJ240555 AJ240556 AJ240557 AJ240560 AJ240561 AJ240566 AJ240574 AJ240575 AJ240576 AJ240577 AJ240580 AJ240581 AJ240590 AJ240595 AJ240604 AJ253044 AJ253050 AJ253054 AJ253077 AJ253085 AY671386 HM996508 Y17927 Y17928 Y17930 Y17931 Y17932 Y17933 Y17934 Y17943 Y17944 Y17945 Y17947 Y17948 Y17949 AY998719 DQ100788 DQ100796 JN110760 JN110800 JN110847 FJ385331 FJ385337 FJ385351 FJ385378 HM774705 HM774878 AF103173 AY193818 EU146315 EU146358 EU146377 EU146394 U21257 U21267 U21268 HM774736 AJ222555 HM995235 X87438 AJ222547 AJ222548 AJ222549 AJ222550 AJ222552 AJ222556 AJ222557 AJ222558 AJ222559 AJ222560 AJ222561 AJ222562 AJ222563 AJ222564 AJ222565 AJ222566 AJ222567 AJ222568 AJ222569 AJ222570 AJ222571 AJ222573 AJ222574 AJ222575 AJ222576 AJ222577 AJ222578 Z46300 Z46301 Z46302 Z46315 Z46316 Z46317 Z46318 Z46319 Z46320 Z46321 Z46322 Z46323 Z46324 Z46325 Z46326 Z46327 Z46328 Z46329 Z46330 Z46331 Z46332 Z46333 Z46334 Z46335 Z46336 Z46337 Z46338 Z46339 Z49139 AJ244942 AJ579251 X64156 X64159 AB063716 AJ244940 AJ279524 AJ279537 AJ556751 AJ579178 AY268371 DQ523935 DQ523975 DQ523980 DQ523984 DQ523987 DQ523990 DQ524003 DQ524006 DQ524007 DQ524018 DQ524044 DQ524065 DQ524068 DQ524074 DQ524077 AB067135 AB067136 AJ244997 AM233792 AM233793 AM233795 AM233801 DQ926349 DQ926350 L34163 X64235 AJ300804 AY670741 AY670790 AY670791 AY670810 AY670816 HM994959 HM995182 HM995183 HM995184 HM995185 HM995187 HM995189 HM995203 HM995204 HM995205 HM995206 HM995207 HM995211 HM995216 HM995244 HM995246 HM995249 HM995308 HM995310 HM995472 HM995477 HM995479 HM995481 HM995550 HM995553 HM995554 HM995743 HM995982 HM996230 HM996238 HM996535 AB063661 AB063671 AB063674 AB066914 AB066915 AB066916 AB066917 AB066918 AB066919 AB066920 AB066921 AB066923 AB066924 AB067034 AB067035 AB067036 AB067037 AB067038 AB067039 AB067040 AB067041 AB067044 AB067046 AB067049 AB067052 AB067053 AB067054 AB067055 AB067056 AB067057 AB067058 AB067059 AB067060 AB067064 AB067066 AB067067 AB067068 AB067084 AB067085 AB067088 AB067089 AB067090 AB067091 AB067092 AB067093 AB067132 AB067133 AB067134 AB067137 AB067142 AB067143 AB067144 AB067145 AB067146 AB067148 AB067149 AB067151 AB110646 AB363152 AB363153 AB363154 AF021948 AF021957 AF021990 AF021991 AF021997 AF022004 AF022005 AF052527 AF062104 AF062113 AF062231 AF062234 AF107233 AF107239 AF107241 AF174041 AF174049 AF174054 AF174085 AF174086 AF174088 AF245309 AF262072 AF262097 AF262100 AF262125 AF262174 AF372845 AJ239335 AJ239362 AJ239377 AJ244929 AJ244931 AJ244935 AJ244937 AJ244938 AJ244939 AJ244941 AJ244943 AJ244944 AJ244951 AJ244959 AJ244960 AJ244962 AJ244966 AJ244967 AJ244968 AJ244969 AJ244972 AJ244973 AJ244975 AJ244978 AJ244982 AJ244984 AJ244985 AJ244987 AJ244988 AJ244990 AJ244991 AJ244992 AJ244994 AJ245008 AJ245009 AJ245011 AJ245013 AJ245017 AJ245028 AJ245035 AJ245036 AJ245039 AJ245040 AJ245041 AJ245042 AJ245043 AJ245044 AJ245046 AJ245049 AJ245051 AJ245052 AJ245054 AJ245057 AJ245065 AJ245236 AJ245238 AJ249631 AJ279513 AJ279519 AJ279521 AJ279526 AJ279531 AJ279535 AJ556773 AJ574778 AJ579118 AJ579121 AJ579122 AJ579124 AJ579129 AJ579135 AJ579164 AJ579165 AJ579167 AJ579175 AJ579176 AJ579201 AJ579206 AJ579208 AJ579211 AJ579213 AJ579240 AJ579241 AJ579242 AJ579243 AJ579246 AJ579248 AJ579249 AJ579250 AJ579253 AJ579255 AJ579256 AJ579257 AJ579258 AJ579259 AJ579260 AJ579286 AJ579287 AJ579289 AJ579290 AJ579302 AJ579304 AY033257 AY062304 AY553641 AY553646 AY670708 AY670709 AY670710 AY670711 AY670716 AY670717 AY670718 AY670720 AY670721 AY670722 AY670723 AY670724 AY670730 AY670736 AY670738 AY670739 AY670743 AY670749 AY670750 AY670755 AY670757 AY670760 AY670761 AY670763 AY670766 AY670767 AY670768 AY670772 AY670775 AY670777 AY670779 AY670781 AY670782 AY670785 AY670787 AY670789 AY670794 AY670795 AY670796 AY670798 AY670801 AY670803 AY670804 AY670811 AY670813 AY670814 AY670815 AY670824 AY670826 AY670827 AY670828 AY670833 AY670834 AY670835 AY670838 AY670839 AY670840 AY670841 AY670842 AY670843 AY670845 AY670846 AY670851 AY670853 AY670855 AY670856 AY670860 AY670863 AY670864 AY670867 AY670870 AY670871 AY670873 AY670875 AY670878 AY670879 AY670882 AY670883 AY670884 AY670885 AY670890 AY670892 AY670893 AY670898 AY670899 AY670900 AY670903 AY670904 AY670905 AY670907 AY670911 AY670913 AY670916 AY670918 AY670919 AY670924 AY670928 AY670929 AY670931 AY670932 AY670935 AY670940 AY670943 AY670944 AY670946 AY670949 AY670952 AY670953 AY670954 AY670962 AY670965 AY670973 AY670974 AY670975 AY670976 AY670977 AY670981 AY670990 AY671010 AY671015 AY671024 AY671047 AY671065 AY671073 AY671078 AY671079 AY671087 AY671093 AY671094 AY671095 AY671096 AY671097 AY671099 AY671100 AY671103 AY671104 AY671105 AY671106 AY671107 AY671108 AY671110 AY671113 AY671115 AY671117 AY671118 AY671120 AY671121 AY671122 AY671123 AY671125 AY671128 AY671129 AY671132 AY671134 AY671135 AY671139 AY671145 AY671153 AY671155 AY671161 AY671209 AY671240 AY671245 AY671257 AY671274 AY671277 AY671283 AY671313 AY671314 AY671315 AY671316 AY671317 AY671319 AY671321 AY671322 AY671323 AY671328 AY671330 AY671332 AY671341 AY671345 AY671347 AY671348 AY671349 AY671354 AY671364 AY671366 AY671370 AY671371 AY671380 AY671382 AY671383 AY671393 AY671409 AY671413 AY671416 AY671422 AY671424 AY671425 AY671427 AY671428 AY671429 AY671430 AY671434 AY671435 AY671436 AY671438 AY671441 AY671443 AY671444 AY671445 AY671446 AY671447 AY671449 AY671452 AY671453 AY671454 AY671455 AY671461 AY671462 AY671464 AY671468 AY671471 AY671478 AY671480 AY671481 AY671483 AY671486 AY671487 AY671491 AY671492 AY671503 AY671505 AY671507 AY671508 AY671510 AY671511 AY671515 AY671518 AY671519 AY671525 AY671527 AY671528 AY671530 AY671532 AY671535 AY671538 AY671539 AY671540 AY671541 AY671543 AY671544 AY671548 AY671555 AY671556 AY671561 AY671564 AY671565 AY671566 AY671568 AY671573 AY671574 AY671577 AY671579 AY671580 AY671581 AY671585 AY671587 AY671591 AY671593 AY671595 AY671612 AY671614 AY671617 AY671619 AY671620 AY671625 AY671629 AY671630 AY671632 AY671634 AY671637 AY671640 AY671642 AY671644 AY671648 AY671650 AY671651 AY671653 AY671658 AY671659 AY671660 AY671663 AY671668 AY671671 AY671676 AY671682 AY671684 AY671685 AY671688 AY671690 AY671691 AY671694 AY671697 AY671698 AY671699 AY671700 AY671702 AY671704 AY671706 AY671707 AY671708 AY671712 AY671716 AY671718 AY671724 AY671732 AY671733 AY671734 AY671735 AY671737 AY671739 AY671741 AY671746 AY671749 AY671750 AY671751 AY671753 AY671756 AY671763 AY671764 AY671765 AY671766 AY671767 AY671769 AY671771 AY671776 AY671781 AY671784 AY885181 AY941889 AY941914 AY941957 DQ005274 DQ005285 DQ100660 DQ100674 DQ100703 DQ100725 DQ100792 DQ100829 DQ100832 DQ100964 DQ926158 DQ926198 DQ926208 DQ926421 DQ926458 DQ926468 DQ926470 DQ926478 DQ926497 DQ926599 DQ926603 EF544907 EF544958 EF544959 EF544973 FJ208782 FJ492903 FJ492909 FJ492910 GU570373 HM152498 HM152511 HM152516 HQ392880 HQ689741 L12192 L23518 L23934 L25293 M26998 M74468 S64473 S66098 S67110 U00497 U00556 U22391 U71103 U89766 U97246 X56592 X87440 Z35492 Z46269 Z46271 Z46272 Z46273 Z46275 Z46277 Z46279 Z46282 Z46304 Z46305 Z46306 Z46307 Z46308 Z46340 Z46341 Z46342 Z49135 Z49140 Z49141 Z49143 Z70604 Z70605 Z70610 Z70616 Z70617 Z70625 Z70626 Z70627 Z70637 Z70638 Z70639 Z70640 Z70641 Z70642 Z70643 Z70644 Z70650 Z74665 Z74695 AY670806 AY670808 AY957532 AY686937 AY957534 DQ535279 DQ535294 DQ535296 DQ535314 DQ535320 DQ535326 DQ535459 EF178028 EF178136 HM996258 M84508 FJ039792 M84512 X54441 AY671298 AY670999 AY671028 AF283780 AF283781 M74018 M74021 AY670983 AY670985 AY670987 AY670989 AY670992 AY670993 AY670995 AY670997 AY670998 AY671018 AY671025 AY671033 AY671043 AY671307 AY671310 AY671046 AY671049 AY671205 AF283784 AY671151 AY671233 AJ579207 AY670982 AY671003 AY671029 AY671050 AY671156 AY671160 AY671171 AY671177 AY671190 AY671199 AY671201 AY671212 AY671226 AY671232 AY671235 AY671236 AY671250 AY671251 AY671261 AY671262 AY671270 AY671272 AY671278 AY671281 AY671287 AY671308 Z47229 AF062101 AF062146 AF062152 AF062158 AF062173 AF062181 AF062183 AF062187 AF062192 AF062196 AF062217 AF062218 AF062250 AJ579203 AY204755 AY204757 AY204759 AY204761 AY671006 AY671008 AY671061 AY671064 AY671168 AY671175 AY671183 AY671200 AY671207 AY671220 AY671238 AY671258 AY671268 AY671275 AY671289 AY671290 AY671303 AY671305 AY671696 AY671705 AY671713 AY671722 AY671727 AY671728 S59161 X64152 X64153 X65904 Z47228 Z47234 Z47241 Z75362 Z75374 Z75376 Z75379 Z75386 Z75389 Z75392 Z75394 Z75398 CU674902 CU678316 BC002963 BC073767 CU675962 BC017356 BC019235 BC001872 BC006180 BX538126 AK301454 TSC_hg19_v1_chr14_-_106830060 AK126280 AK128649 AK127921 CR933690	-43797	-	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 AF044420 AF044422 AF044425 AF044427 AF044442 AF090355 AF099201 AF174074 AF471431 AJ132850 AJ271549 AJ300787 AJ300793 AJ300798 AJ300803 AJ308463 AJ633622 AJ633623 AY028777 AY033265 AY033266 AY033267 AY530317 AY554176 AY640472 AY640475 AY640477 AY640483 AY640501 AY640511 AY640535 AY640539 AY640541 AY640544 AY640549 AY640550 AY640557 AY640558 AY640561 AY640568 AY640569 AY640573 AY640577 AY685306 AY781859 AY846266 AY846267 AY866744 AY941844 AY941856 AY941857 AY941860 AY941863 AY941865 AY941866 AY941868 AY941892 AY941896 AY941898 AY941901 AY941907 AY941913 AY941935 AY941942 AY941950 AY941953 AY941968 AY941970 AY941982 AY941983 AY941985 AY941986 AY941988 AY941989 AY944708 AY944716 AY971015 AY971027 AY971037 AY971078 AY971081 AY971115 AY971120 AY971130 AY971135 DQ065629 DQ065669 DQ065674 DQ065689 DQ065692 DQ065718 DQ065725 DQ431499 DQ431621 DQ431627 DQ840705 DQ840715 DQ840744 DQ926087 DQ926091 DQ926150 DQ926207 DQ926222 DQ926372 DQ926388 DQ926512 DQ926569 DQ926578 DQ926634 EF177978 EF178004 EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 AY866854 AY882579 AY927661 AY941847 AY941848 AY941861 AY941864 AY941867 AY941869 AY941871 AY941872 AY941874 AY941875 AY941893 AY941894 AY941895 AY941897 AY941904 AY941908 AY941922 AY941932 AY941933 AY941934 AY941944 AY941946 AY941951 AY941954 AY941956 AY941963 AY941964 AY941966 AY941967 AY941969 AY944690 AY971127 D83678 D83681 D83684 D83685 D83694 DQ005284 DQ065696 DQ100659 DQ100685 DQ100775 DQ100819 DQ100846 DQ100857 DQ100907 DQ100930 DQ212508 DQ212509 DQ431475 DQ431476 DQ431501 DQ431573 DQ431575 DQ431576 DQ431580 DQ431582 DQ431606 DQ431607 DQ431622 DQ431628 DQ431633 DQ431634 DQ431637 DQ431642 DQ431643 DQ431646 DQ431653 DQ431658 DQ535263 DQ535266 DQ535268 DQ535293 DQ535308 DQ535373 DQ535382 DQ535397 DQ535424 DQ535426 DQ535429 DQ535437 DQ535439 DQ535440 DQ535461 DQ535466 DQ840703 DQ840706 DQ840712 DQ840713 DQ840745 DQ840782 DQ840813 DQ923052 DQ926032 DQ926064 DQ926133 DQ926340 DQ926374 DQ926384 DQ926552 EF177969 EF177975 EF177991 EF178015 EF178075 EF178091 EF178098 EF178099 EF221755 EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	-82409	-	U32154 AF460767 DQ524080 DQ454738 Y08403 HM774396 AF103161 AJ245070 AY866645 AM233757 AY670731 DQ005273 AB063909 AB363132 AJ556745 AY670715 AY670719 AY670726 AY670727 AY670745 AY670770 AY670773 AY670784 AY670819 AY670831 AY670837 AY670857 AY671081 AY671102 AY671324 AY671379 AY671400 AY671500 AY671586 AY671639 AY671641 AY671703 AY671775 AY671785 AY781815 AY781827 AY866636 DQ065711 DQ926028 DQ926188 DQ926206 FJ492934 AJ430733 EF178114 FJ385294 HM152518 AY392953 L28053 AY671012 AY671034 AY671045 AY671152 AY671174 AY671714 AY671721 L03677 Z75396 Z75404 L23570 BC073765 AK130813 AK301332 AK130585 AK128579 AK128568 AK129620 TSC_hg19_v1_chr14_-_106781004	-92933	-	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 AJ245014 AJ245018 AJ245021 AJ245023 AJ245024 AJ245030 AJ245033 AJ245034 AJ245038 AJ245056 AJ245060 AJ245061 AJ245071 AJ249629 AJ279514 AJ279515 AJ279525 AJ279530 AJ308449 AJ389175 AJ389176 AJ414019 AJ416561 AJ555264 AJ556674 AJ556675 AJ556676 AJ556691 AJ556693 AJ574781 AJ579117 AJ579126 AJ579130 AJ579131 AJ579134 AJ579138 AJ579166 AJ579168 AJ579169 AJ579170 AJ579179 AJ579200 AJ579202 AJ579205 AJ579209 AJ579210 AJ579214 AJ579244 AJ579245 AJ579292 AJ579293 AJ579297 AJ617569 AY165854 AY268372 AY268373 AY300037 AY577300 AY640552 AY670713 AY670734 AY670740 AY670742 AY670747 AY670751 AY670754 AY670758 AY670762 AY670771 AY670774 AY670799 AY670802 AY670805 AY670817 AY670822 AY670823 AY670825 AY670849 AY670850 AY670858 AY670859 AY670865 AY670874 AY670881 AY670894 AY670896 AY670897 AY670902 AY670914 AY670920 AY670922 AY670947 AY670950 AY670955 AY670960 AY670961 AY670970 AY670972 AY670978 AY670980 AY670986 AY670991 AY671017 AY671060 AY671089 AY671090 AY671101 AY671109 AY671112 AY671114 AY671119 AY671124 AY671126 AY671136 AY671137 AY671140 AY671146 AY671264 AY671318 AY671368 AY671369 AY671384 AY671392 AY671418 AY671433 AY671439 AY671482 AY671489 AY671517 AY671524 AY671534 AY671536 AY671545 AY671552 AY671560 AY671562 AY671563 AY671567 AY671572 AY671576 AY671578 AY671582 AY671583 AY671588 AY671598 AY671599 AY671600 AY671602 AY671616 AY671624 AY671626 AY671635 AY671638 AY671661 AY671672 AY671677 AY671681 AY671730 AY671736 AY671744 AY671752 AY671773 AY671774 AY671778 AY671780 AY671786 AY781849 AY885184 AY941931 AY941962 AY941975 AY960198 AY960201 AY971014 AY971044 AY971045 AY971080 AY971086 AY998723 DQ005257 DQ065676 DQ100673 DQ100687 DQ100701 DQ100784 DQ100821 DQ100822 DQ100824 DQ100825 DQ100897 DQ100953 DQ205162 DQ205173 DQ212518 DQ212520 DQ328872 DQ431572 DQ431610 DQ926162 DQ926290 DQ926291 DQ926302 DQ926317 DQ926323 DQ926515 DQ926519 DQ926521 DQ926608 FJ039783 FJ039790 FJ039791 FJ385371 FJ385402 FR820867 FR820868 FR820869 FR820870 FR820871 FR820872 FR820873 FR820875 GU570374 HM152512 HM152521 HQ689769 JN201901 L12190 L43117 U00494 U00566 U00571 U00578 U00581 U64496 U96278 U96280 U96285 U96287 U97243 X84336 X84339 Y08428 Y09249 Y09390 Z18316 Z46285 Z70608 Z70621 Z70622 Z70623 Z70631 Z70632 Z70654 Z70655 Z70656 Z70657 DQ926182 DQ926347 DQ926348 AY944695 DQ535289 DQ535393 DQ535427 DQ535433 DQ535456 EF177973 EF178111 EF178132 FJ385279 AJ579303 X54447 AY392937 X17678 S63731 X54437 Z14197 AY671021 AY670994 AY671000 AY671001 AY671009 AY671012 AY671016 AY671023 AY671031 AY671036 AY671054 AY671142 AY671197 AY671335 AY671182 AF013622 AY671048 AY671052 AY671159 AY671179 AY671239 AY671263 AY671276 AY671279 AY671282 AF013619 AF062204 AF062240 AF247737 AY671165 AY671185 AY671217 AY671297 AY671693 AY671723 AY671725 CU677619 EU937522 L23556 L38425 M99607 U86523 U86524 X65903 X65911 Z14198 Z75364 Z75388 AY671162 X52895 TSC_hg19_v1_chr14_-_106878091 X56158 M97921 AF417843 AK057754 AK057775 AK130529 BC025985 BX640824 AK130609 Z14206 AK126352 AK129514 AK129592 AK129637 AK130589 AK130611 BC016369 BX538077 BX648082 BX648874 Z14195 AK095222 AK303185	4204	-	GQ232933 AY003798 FJ840151 FJ873995 EF407840 AM279492 AM279629 HM774186 AY957513 EF633772 AY062305 DQ524058 AF174122 AY944701 DQ065664 DQ065670 DQ065719 DQ065726 DQ926522 EF178118 EF633803 FJ385316 GU570332 HM995173 HM995251 HM995315 HM995321 HM995523 AB021518 AB021527 AF035043 AF471473 AJ579183 DQ535349 DQ535444 GU570331 GU570333 X95661 Z47231 BC092518 TSC_hg19_v1_chr14_-_106926725 BX647160 AK123783 AK097306 AK097329	52856	-	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	64755	+	AF174049|SKAP2|8935|src kinase associated phosphoprotein 2##BC002963|IGHM|3507|immunoglobulin heavy constant mu##BC073767|IGHM|3507|immunoglobulin heavy constant mu##BC017356|IGHM|3507|immunoglobulin heavy constant mu##BC019235|IGHM|3507|immunoglobulin heavy constant mu##BC001872|IGHM|3507|immunoglobulin heavy constant mu##BC006180|IGHM|3507|immunoglobulin heavy constant mu##BX538126|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK126280|IGHD|3495|immunoglobulin heavy constant delta##AK128649|IGHD|3495|immunoglobulin heavy constant delta##AK127921|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073765|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK130813|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130585|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128568|IGHD|3495|immunoglobulin heavy constant delta##AK129620|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221	4.352359	CTCF.p2:1:1.000	CTCF.p2:-35:0.996	CTCF.p2:40:0.414	CTCF.p2:79:0.965	CTCF.p2:-91:0.978
chr17_ctg5_hap1	120671	120797	reg1011944.p1	9.743	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.553046	CTCF.p2:-7:0.553
chr22	20226196	20226297	reg1011418.p2	9.743	+	NM_001243537	-88816	-	TSC_hg19_v1_chr22_+_20119357 AY894890 BC053544 NM_001185024 NM_013373 AK131238	-106813	+	TSC_hg19_v1_chr22_+_20105145 AB587487 CU013156 CU013444	-121089	+	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	29521	-	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	81323	-	NM_001242313	151422	+	NM_001243537|LOC388849|388849|uncharacterized LOC388849##AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8##BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8##AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8##CU013156|RANBP1|5902|RAN binding protein 1##CU013444|RANBP1|5902|RAN binding protein 1##AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_001242313|TMEM191B|728229|transmembrane protein 191B	0.97177	CTCF.p2:5:0.972
chr8	131107046	131107189	reg1011763.p1	9.743	+	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-78234	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-78423	-	BC016345 TSC_hg19_v1_chr8_-_131028667	-78458	-	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	348914	-	NM_001115	945717	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1809240	+	AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B##NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.011209	
chr1	212464971	212465101	reg1012940.p2	9.742	+	TSC_hg19_v1_chr1_+_212459262 BC022474 AB527512 DQ892361 DQ895568	-5679	+	BC110883 TSC_hg19_v1_chr1_+_212459259	-5822	+	TSC_hg19_v1_chr1_+_212458867 L42373 NM_006243	-6164	+	AK302202 NM_001199756	10111	+	AK295224 CR457268 CU675347 TSC_hg19_v1_chr1_-_212588229 BC006320	123117	-	TSC_hg19_v1_chr1_-_212588235 AK001736	123199	-	BC022474|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##DQ892361|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##DQ895568|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##BC110883|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##L42373|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##NM_006243|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##AK302202|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##NM_001199756|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##AK295224|TMEM206|55248|transmembrane protein 206##CR457268|TMEM206|55248|transmembrane protein 206##BC006320|TMEM206|55248|transmembrane protein 206##AK001736|TMEM206|55248|transmembrane protein 206	0.0149	
chr12	51031773	51031923	reg1012732.p1	9.742	+	TSC_hg19_v1_chr12_+_50898778 BC075027	-132949	+	TSC_hg19_v1_chr12_+_50898767 AK091597 AX747083 NM_173602	-133093	+	TSC_hg19_v1_chr12_+_50869532 AF131755	-162261	+	TSC_hg19_v1_chr12_+_51157883 NM_005171 AK313406 BC029619	126030	+	TSC_hg19_v1_chr12_+_51158275 AK299240	126410	+	NM_182559 BC035123 BC048112 CU690554	204875	+	BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##AK091597|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##NM_173602|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_005171|ATF1|466|activating transcription factor 1##AK313406|ATF1|466|activating transcription factor 1##BC029619|ATF1|466|activating transcription factor 1##AK299240|ATF1|466|activating transcription factor 1##NM_182559|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC035123|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC048112|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12	0.973119	CTCF.p2:13:0.973
chr18	20817739	20817891	reg1010891.p2	9.742	+	BC037218 NM_138375	-82027	+	EF028204 NM_001100619	-102089	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-304000	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	200056	-	AK057292 NM_003831	214971	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	215431	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.0	
chr5	172411389	172411569	reg1012067.p1	9.742	+	TSC_hg19_v1_chr5_+_172410833 CR456856 CR542131	-635	+	NM_003945 TSC_hg19_v1_chr5_+_172410801 BC119715 BC119714 AK312068 Y15286	-697	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	-25031	+	TSC_hg19_v1_chr5_+_172483354 BX647768 NM_001168393 NM_001168394 NM_153607 AK300043 AY139008 BC041709 AY174896 AK124117 BX647573 AK291677	71905	+	TSC_hg19_v1_chr5_+_172484383 AK297424	72904	+	NM_001205 NM_013978 NM_013979 NM_013980 BC010959 TSC_hg19_v1_chr5_+_172571536 AF083957 AF083958 U15172 AB527856 CU679862 AF083956 AY216799	160017	+	CR456856|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR542131|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##NM_003945|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119715|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119714|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##AK312068|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##Y15286|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1##BX647768|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41##NM_153607|C5orf41|153222|chromosome 5 open reading frame 41##AK300043|C5orf41|153222|chromosome 5 open reading frame 41##AY139008|C5orf41|153222|chromosome 5 open reading frame 41##BC041709|C5orf41|153222|chromosome 5 open reading frame 41##AY174896|C5orf41|153222|chromosome 5 open reading frame 41##AK124117|C5orf41|153222|chromosome 5 open reading frame 41##BX647573|C5orf41|153222|chromosome 5 open reading frame 41##AK291677|C5orf41|153222|chromosome 5 open reading frame 41##AK297424|C5orf41|153222|chromosome 5 open reading frame 41##NM_001205|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013978|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013979|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013980|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##BC010959|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083957|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083958|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##U15172|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083956|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AY216799|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1	0.022719	
chr15	72492166	72492300	reg1013738.p1	9.740	+	BC038451 AK095072 NM_001012642 TSC_hg19_v1_chr15_-_72490157	-2098	-	AF308450 TSC_hg19_v1_chr15_+_72410743 BC031411	-81485	+	AK292298 NM_001172111 NM_145204 TSC_hg19_v1_chr15_+_72410636 AY008293	-81586	+	Z36786 TSC_hg19_v1_chr15_-_72501152 BC019265	8891	-	AK309781 NM_001206799	29829	-	TSC_hg19_v1_chr15_-_72523471 AK294315	31229	-	BC038451|GRAMD2|196996|GRAM domain containing 2##AK095072|GRAMD2|196996|GRAM domain containing 2##NM_001012642|GRAMD2|196996|GRAM domain containing 2##AF308450|SENP8|123228|SUMO/sentrin specific peptidase family member 8##BC031411|SENP8|123228|SUMO/sentrin specific peptidase family member 8##AK292298|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172111|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_145204|SENP8|123228|SUMO/sentrin specific peptidase family member 8##AY008293|SENP8|123228|SUMO/sentrin specific peptidase family member 8##BC019265|PKM2|5315|pyruvate kinase, muscle##AK309781|PKM2|5315|pyruvate kinase, muscle##NM_001206799|PKM2|5315|pyruvate kinase, muscle##AK294315|PKM2|5315|pyruvate kinase, muscle	1.087841	CTCF.p2:-13:0.995
chr18	35056300	35056402	reg1014154.p1	9.740	+	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-647231	-	TSC_hg19_v1_chr18_+_34409093 AK304230 AL832625 NM_020776 BC038772 AK292288 BX648875 BC045585 AB587550 AM393103 AM393380 BC146691	-647268	+	AB073382 TSC_hg19_v1_chr18_-_34408948	-647399	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	89345	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	89648	-	TSC_hg19_v1_chr18_-_36915657 D28405	1859305	-	BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK304230|KIAA1328|57536|KIAA1328##AL832625|KIAA1328|57536|KIAA1328##NM_020776|KIAA1328|57536|KIAA1328##AK292288|KIAA1328|57536|KIAA1328##BX648875|KIAA1328|57536|KIAA1328##BC045585|KIAA1328|57536|KIAA1328##AM393103|KIAA1328|57536|KIAA1328##AM393380|KIAA1328|57536|KIAA1328##BC146691|KIAA1328|57536|KIAA1328##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4	1.10084	CTCF.p2:1:0.999
chr6	143600661	143600788	reg1012518.p2	9.740	+	TSC_hg19_v1_chr6_+_143382055 BC025278 CU692954 DQ893291 DQ896622 BX538067	-218642	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	-218688	+	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	-218729	+	TSC_hg19_v1_chr6_-_143771811 BC037955 NM_182503	171105	-	TSC_hg19_v1_chr6_+_143771941 NM_003630 BC014551 BC015506 AB035307 AK025644 AK300907 AJ001625 AJ131389 AY277600 CR542062 CU677325	171276	+	CU678350 AK296485 BC003060 AK075458 TSC_hg19_v1_chr6_-_143832841 AY358551 BC051268 AK315475 NM_032020	232170	-	BC025278|AIG1|51390|androgen-induced 1##DQ893291|AIG1|51390|androgen-induced 1##DQ896622|AIG1|51390|androgen-induced 1##BX538067|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC037955|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_182503|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_003630|PEX3|8504|peroxisomal biogenesis factor 3##BC014551|PEX3|8504|peroxisomal biogenesis factor 3##BC015506|PEX3|8504|peroxisomal biogenesis factor 3##AB035307|PEX3|8504|peroxisomal biogenesis factor 3##AK025644|PEX3|8504|peroxisomal biogenesis factor 3##AK300907|PEX3|8504|peroxisomal biogenesis factor 3##AJ001625|PEX3|8504|peroxisomal biogenesis factor 3##AJ131389|PEX3|8504|peroxisomal biogenesis factor 3##AY277600|PEX3|8504|peroxisomal biogenesis factor 3##CR542062|PEX3|8504|peroxisomal biogenesis factor 3##AK296485|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC003060|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK075458|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AY358551|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC051268|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK315475|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_032020|FUCA2|2519|fucosidase, alpha-L- 2, plasma	0.354871	CTCF.p2:10:0.355
chr15	42358829	42358930	reg1012595.p1	9.739	+	NM_001206670	-15979	-	AK074621 AK292634 TSC_hg19_v1_chr15_-_42264753 AK024902 NM_139265	-94126	-	TSC_hg19_v1_chr15_-_42264741 CU690850 DQ892745 DQ895991 BC077716 AF454953 BC006287 AF307137 AF323924 BC051823	-94163	-	AB527201 AB090876 NM_178034	27825	-	BC111481 BC035335 AK122623 BC142682 BC146648 BC131531 AK304368 AK172836 NM_213600	89924	-	TSC_hg19_v1_chr15_-_42500479 AF280814 CU686671 AM392538 AM393769 AB018313	141528	-	NM_001206670|PLA2G4E|123745|phospholipase A2, group IVE##AK074621|EHD4|30844|EH-domain containing 4##AK292634|EHD4|30844|EH-domain containing 4##AK024902|EHD4|30844|EH-domain containing 4##NM_139265|EHD4|30844|EH-domain containing 4##DQ892745|EHD4|30844|EH-domain containing 4##DQ895991|EHD4|30844|EH-domain containing 4##BC077716|EHD4|30844|EH-domain containing 4##AF454953|EHD4|30844|EH-domain containing 4##BC006287|EHD4|30844|EH-domain containing 4##AF307137|EHD4|30844|EH-domain containing 4##AF323924|EHD4|30844|EH-domain containing 4##BC051823|EHD4|30844|EH-domain containing 4##AB090876|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##NM_178034|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##BC111481|PLA2G4F|255189|phospholipase A2, group IVF##BC035335|PLA2G4F|255189|phospholipase A2, group IVF##AK122623|PLA2G4F|255189|phospholipase A2, group IVF##BC142682|PLA2G4F|255189|phospholipase A2, group IVF##BC146648|PLA2G4F|255189|phospholipase A2, group IVF##BC131531|PLA2G4F|255189|phospholipase A2, group IVF##AK304368|PLA2G4F|255189|phospholipase A2, group IVF##AK172836|PLA2G4F|255189|phospholipase A2, group IVF##NM_213600|PLA2G4F|255189|phospholipase A2, group IVF##AF280814|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AM392538|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AM393769|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AB018313|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)	1.099739	CTCF.p2:-6:0.530	CTCF.p2:-70:0.569
chr14	76177609	76177722	reg1012779.p1	9.738	+	TSC_hg19_v1_chr14_+_76127671 BC136472 BC136473	-50002	+	TSC_hg19_v1_chr14_+_76127610 AK309748 AY237126 BC002766	-50048	+	NM_015072 TSC_hg19_v1_chr14_+_76127588 BC110652	-50096	+	BT007287 AB590825 TSC_hg19_v1_chr14_-_76447259	269582	-	TSC_hg19_v1_chr14_-_76447323 BC018503 EF560714	269665	-	AK313564 TSC_hg19_v1_chr14_-_76447479 X14149 J03241	269806	-	BC136472|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BC136473|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##AK309748|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##AY237126|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##NM_015072|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BC110652|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BT007287|TGFB3|7043|transforming growth factor, beta 3##BC018503|TGFB3|7043|transforming growth factor, beta 3##EF560714|TGFB3|7043|transforming growth factor, beta 3##AK313564|TGFB3|7043|transforming growth factor, beta 3##X14149|TGFB3|7043|transforming growth factor, beta 3##J03241|TGFB3|7043|transforming growth factor, beta 3	0.672593	CTCF.p2:-10:0.673
chr14	89335033	89335175	reg1015143.p1	9.738	+	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-44111	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-75894	-	NM_207662 BC027607 AF474376	-274351	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	543672	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	548306	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	750491	-	AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3	0.925893	CTCF.p2:18:0.926
chr5	150903032	150903162	reg1013350.p1	9.738	+	TSC_hg19_v1_chr5_+_150827239 AY162213 BC136437 BC136438	-75853	+	AK309323 TSC_hg19_v1_chr5_+_150827187	-75908	+	TSC_hg19_v1_chr5_+_150827163 NM_078483 BX537963 AY227111	-75937	+	AF231022 NM_001447	45407	-	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	163364	-	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	163411	-	AY162213|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136437|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136438|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AK309323|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##NM_078483|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BX537963|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AY227111|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)	0.0	
chr5	162991439	162991588	reg1014433.p1	9.738	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-58870	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-61225	+	NM_001142556 NM_001142557 NM_012484 NM_012485 BC057235 AK313603 BC030505 TSC_hg19_v1_chr5_+_162887665 AK302975 BC006984 AK303616 BC070281 BC017793 U29343 AF032862 BC108904 BC108905 BC107869 AK290577	-103918	+	HE578282 HE578283 NM_001122679	3720329	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	4727308	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	4921961	+	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001142556|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001142557|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012484|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012485|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC057235|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK313603|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC030505|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK302975|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK303616|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC070281|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC017793|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##U29343|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AF032862|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108904|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108905|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC107869|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK290577|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.063784	
chr1	226309289	226309443	reg1012360.p2	9.737	+	TSC_hg19_v1_chr1_+_226271319 BC032899	-38006	+	TSC_hg19_v1_chr1_+_226250433 BC081560 BC081561	-58933	+	TSC_hg19_v1_chr1_+_226250421 AK291102 AK293541 BC029405 BC067757 BC095447 M11354 BC066901	-58940	+	BC039575 TSC_hg19_v1_chr1_-_226374400	65034	-	AY150218 TSC_hg19_v1_chr1_-_226374401 BC045533 BC060792 NM_022735 AK025520 AK314468 AB043587	65051	-	BC111974 BC113441 BC143784 TSC_hg19_v1_chr1_+_226411364 AF211891 NM_031944	101984	+	BC081560|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC081561|H3F3A|3020|H3 histone, family 3A##AK291102|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##AK293541|H3F3A|3020|H3 histone, family 3A##BC029405|H3F3A|3020|H3 histone, family 3A##BC067757|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC095447|H3F3A|3020|H3 histone, family 3A##M11354|H3F3A|3020|H3 histone, family 3A##BC066901|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC039575|ACBD3|64746|acyl-CoA binding domain containing 3##AY150218|ACBD3|64746|acyl-CoA binding domain containing 3##BC045533|ACBD3|64746|acyl-CoA binding domain containing 3##BC060792|ACBD3|64746|acyl-CoA binding domain containing 3##NM_022735|ACBD3|64746|acyl-CoA binding domain containing 3##AK025520|ACBD3|64746|acyl-CoA binding domain containing 3##AK314468|ACBD3|64746|acyl-CoA binding domain containing 3##AB043587|ACBD3|64746|acyl-CoA binding domain containing 3##BC111974|MIXL1|83881|Mix paired-like homeobox##BC113441|MIXL1|83881|Mix paired-like homeobox##BC143784|MIXL1|83881|Mix paired-like homeobox##AF211891|MIXL1|83881|Mix paired-like homeobox##NM_031944|MIXL1|83881|Mix paired-like homeobox	0.999849	CTCF.p2:-23:1.000
chr14	67993432	67993544	reg1009315.p1	9.735	+	NM_182526 TSC_hg19_v1_chr14_-_67982162 AK090706 AX746582	-11378	-	TSC_hg19_v1_chr14_-_67878872 BC001226	-114617	-	BC008056 AB528314 DQ891238 DQ894423 TSC_hg19_v1_chr14_-_67878843 AF228603 NM_016445	-114677	-	AK307428 NM_020715 TSC_hg19_v1_chr14_+_68000028 AB033026 BC146787	6485	+	BT006804 CU678574 BC071849 BC004100 L19783 AK314108 AK293584 NM_004569	73479	-	TSC_hg19_v1_chr14_+_68086582 BC029050 NM_001172	93101	+	NM_182526|TMEM229B|161145|transmembrane protein 229B##AK090706|TMEM229B|161145|transmembrane protein 229B##BC001226|PLEK2|26499|pleckstrin 2##BC008056|PLEK2|26499|pleckstrin 2##DQ891238|PLEK2|26499|pleckstrin 2##DQ894423|PLEK2|26499|pleckstrin 2##AF228603|PLEK2|26499|pleckstrin 2##NM_016445|PLEK2|26499|pleckstrin 2##AK307428|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##NM_020715|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##AB033026|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##BC146787|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##BT006804|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC071849|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC004100|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##L19783|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##AK314108|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##NM_004569|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC029050|ARG2|384|arginase, type II##NM_001172|ARG2|384|arginase, type II	0.996818	CTCF.p2:-3:0.997
chr1	58513058	58513182	reg1011789.p2	9.734	+	TSC_hg19_v1_chr1_-_57888785 AK313144	-624292	-	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	-1081404	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	-1192612	+	TSC_hg19_v1_chr1_-_58716179 CR933698 AB210012	203062	-	TSC_hg19_v1_chr1_-_58716210 AK095513 NM_021080	203089	-	TSC_hg19_v1_chr1_-_59012387 AF263547 NM_145243 AB048348 BC012915 AK308847	499303	-	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##CR933698|DAB1|1600|disabled homolog 1 (Drosophila)##AB210012|DAB1|1600|disabled homolog 1 (Drosophila)##AK095513|DAB1|1600|disabled homolog 1 (Drosophila)##NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)##NM_145243|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AB048348|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BC012915|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AK308847|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)	0.999519	CTCF.p2:-1:1.000
chr19	33090698	33090820	reg1013968.p1	9.734	+	TSC_hg19_v1_chr19_+_33072095 NM_004708 AK293486 AB209040 BC015519 AF014955 DQ208400 AB590247 DQ893577 DQ894611 BT006694 CR456934	-18632	+	NM_207325 TSC_hg19_v1_chr19_+_32897021 AK126757 AF533710	-193702	+	TSC_hg19_v1_chr19_+_32896675 NM_001172774 AK129497 AF533711 BC029162	-194146	+	BC050529 TSC_hg19_v1_chr19_-_33166076 AF447882 AL136784 AK054561 BC045605 NM_032139	75328	-	AK124499 NM_207391	75553	+	TSC_hg19_v1_chr19_+_33182761 NM_001105570	92018	+	NM_004708|PDCD5|9141|programmed cell death 5##AK293486|PDCD5|9141|programmed cell death 5##AB209040|PDCD5|9141|programmed cell death 5##BC015519|PDCD5|9141|programmed cell death 5##AF014955|PDCD5|9141|programmed cell death 5##DQ208400|PDCD5|9141|programmed cell death 5##DQ893577|PDCD5|9141|programmed cell death 5##DQ894611|PDCD5|9141|programmed cell death 5##BT006694|PDCD5|9141|programmed cell death 5##CR456934|PDCD5|9141|programmed cell death 5##NM_207325|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AK126757|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AF533710|DPY19L3|147991|dpy-19-like 3 (C. elegans)##NM_001172774|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AK129497|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AF533711|DPY19L3|147991|dpy-19-like 3 (C. elegans)##BC029162|DPY19L3|147991|dpy-19-like 3 (C. elegans)##BC050529|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##AF447882|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##AL136784|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##AK054561|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##BC045605|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##NM_032139|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##AK124499|RGS9BP|388531|regulator of G protein signaling 9 binding protein##NM_207391|RGS9BP|388531|regulator of G protein signaling 9 binding protein##NM_001105570|NUDT19|390916|nudix (nucleoside diphosphate linked moiety X)-type motif 19	0.999843	CTCF.p2:-9:1.000
chr6	143067803	143067943	reg1014411.p1	9.734	+	TSC_hg19_v1_chr6_+_142623443 BX640873	-444467	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-444804	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-557244	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	198455	-	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	314122	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	314163	+	BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1	0.485988	CTCF.p2:-15:0.486
chr2	131315006	131315148	reg1014578.p1	9.733	+	NM_001079530 AK315326 AK290094 NM_032545 BC146897 BC110080 BC069508 BC074825 BC074826 AF312769	-36239	+	NM_001142370 NM_014369 TSC_hg19_v1_chr2_+_131113598 BC031076 BC024280 BC041562 BC052800 X79568 AK303804 CU690934	-201427	+	TSC_hg19_v1_chr2_+_131100487 BC010042 NM_033416	-214591	+	CU686866 AF312769 BC074825 BC074826 BC069508 BC110080 BC146897 NM_032545 AK290094 AK315326 NM_001079530	41977	-	BC105013 BC105041 NM_207364 AY569570 AY280965	171606	+	AK289525 NM_152698 AK095696 AK291424 BC113445 BC113447 BC143806 NM_001105193	198038	+	NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_001142370|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##NM_014369|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC031076|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC024280|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC041562|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC052800|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##X79568|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##AK303804|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC010042|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_033416|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##BC105013|GPR148|344561|G protein-coupled receptor 148##BC105041|GPR148|344561|G protein-coupled receptor 148##NM_207364|GPR148|344561|G protein-coupled receptor 148##AY569570|GPR148|344561|G protein-coupled receptor 148##AY280965|GPR148|344561|G protein-coupled receptor 148##AK289525|FAM123C|205147|family with sequence similarity 123C##NM_152698|FAM123C|205147|family with sequence similarity 123C##AK095696|FAM123C|205147|family with sequence similarity 123C##AK291424|FAM123C|205147|family with sequence similarity 123C##BC113445|FAM123C|205147|family with sequence similarity 123C##BC113447|FAM123C|205147|family with sequence similarity 123C##BC143806|FAM123C|205147|family with sequence similarity 123C##NM_001105193|FAM123C|205147|family with sequence similarity 123C	1.008664	CTCF.p2:-20:0.996
chr8	123685832	123685956	reg1013041.p1	9.733	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-1032268	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1861388	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1861624	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	108017	+	BC042145 TSC_hg19_v1_chr8_+_123794000	108100	+	TSC_hg19_v1_chr8_+_123794108 AB020661	108209	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.996363	CTCF.p2:-8:0.996
chr1	223872009	223872153	reg1014914.p1	9.732	+	TSC_hg19_v1_chr1_-_223853404 NM_001143962	-18664	-	TSC_hg19_v1_chr1_-_223853364 BC157893	-18711	-	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	-305316	+	AK316211 AK297800 NM_001146068	17192	+	TSC_hg19_v1_chr1_+_223900093 BC007686 BC011828 NM_001748	28036	+	M23254 TSC_hg19_v1_chr1_+_223900223 AK303952 AF261089 AK315179 BC021303	28137	+	NM_001143962|CAPN8|388743|calpain 8##BC157893|CAPN8|388743|calpain 8##NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65##AK316211|CAPN2|824|calpain 2, (m/II) large subunit##AK297800|CAPN2|824|calpain 2, (m/II) large subunit##NM_001146068|CAPN2|824|calpain 2, (m/II) large subunit##BC007686|CAPN2|824|calpain 2, (m/II) large subunit##BC011828|CAPN2|824|calpain 2, (m/II) large subunit##NM_001748|CAPN2|824|calpain 2, (m/II) large subunit##M23254|CAPN2|824|calpain 2, (m/II) large subunit##AK303952|CAPN2|824|calpain 2, (m/II) large subunit##AF261089|CAPN2|824|calpain 2, (m/II) large subunit##AK315179|CAPN2|824|calpain 2, (m/II) large subunit##BC021303|CAPN2|824|calpain 2, (m/II) large subunit	0.105001	
chr2	59529085	59529198	reg1012304.p1	9.732	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-1060659	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-1255153	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-1255387	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	1251381	-	AF080216 TSC_hg19_v1_chr2_-_60780784	1251637	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	1454343	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.988904	CTCF.p2:5:0.989
chr10	124463478	124463593	reg1012945.p1	9.731	+	BC140922 BC065903 NM_001010912	-4202	-	AF159456 AJ000342 AJ243212 AJ243224 NM_004406 NM_007329 NM_017579 BC153299 AJ297935 AK304149 TSC_hg19_v1_chr10_+_124320269 AK304128	-143309	+	TSC_hg19_v1_chr10_+_124221068 AK091944 AX747270 NM_002775 AK092476 AK290089 BC011352 D87258 BC031082 Y07921 AB590567	-242459	+	AY260047 AY260048 AY260049 AY260050 NM_022034	142155	-	BC031343 AK300849 NM_001204364 NM_152644	175581	-	TSC_hg19_v1_chr10_+_124639202 AK300776	175688	+	BC140922|C10orf120|399814|chromosome 10 open reading frame 120##BC065903|C10orf120|399814|chromosome 10 open reading frame 120##NM_001010912|C10orf120|399814|chromosome 10 open reading frame 120##AF159456|DMBT1|1755|deleted in malignant brain tumors 1##AJ000342|DMBT1|1755|deleted in malignant brain tumors 1##AJ243212|DMBT1|1755|deleted in malignant brain tumors 1##AJ243224|DMBT1|1755|deleted in malignant brain tumors 1##NM_004406|DMBT1|1755|deleted in malignant brain tumors 1##NM_007329|DMBT1|1755|deleted in malignant brain tumors 1##NM_017579|DMBT1|1755|deleted in malignant brain tumors 1##BC153299|DMBT1|1755|deleted in malignant brain tumors 1##AJ297935|DMBT1|1755|deleted in malignant brain tumors 1##AK304149|DMBT1|1755|deleted in malignant brain tumors 1##AK304128|DMBT1|1755|deleted in malignant brain tumors 1##AK091944|HTRA1|5654|HtrA serine peptidase 1##NM_002775|HTRA1|5654|HtrA serine peptidase 1##AK092476|HTRA1|5654|HtrA serine peptidase 1##AK290089|HTRA1|5654|HtrA serine peptidase 1##BC011352|HTRA1|5654|HtrA serine peptidase 1##D87258|HTRA1|5654|HtrA serine peptidase 1##BC031082|HTRA1|5654|HtrA serine peptidase 1##Y07921|HTRA1|5654|HtrA serine peptidase 1##AY260047|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260048|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260049|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260050|CUZD1|50624|CUB and zona pellucida-like domains 1##NM_022034|CUZD1|50624|CUB and zona pellucida-like domains 1##BC031343|FAM24B|196792|family with sequence similarity 24, member B##AK300849|FAM24B-CUZD1|100533195|FAM24B-CUZD1 readthrough##NM_001204364|FAM24B|196792|family with sequence similarity 24, member B##NM_152644|FAM24B|196792|family with sequence similarity 24, member B##AK300776|LOC399815|399815|chromosome 10 open reading frame 88 pseudogene	0.973722	CTCF.p2:5:0.974
chr14	23287453	23287556	reg1009164.p2	9.731	+	AB020532 BX161519 NM_001126105	-2446	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	-2872	-	TSC_hg19_v1_chr14_-_23284568 AK025377	-2925	-	Y18474 BX248291 AF092032 AJ130718 NM_001126106	1461	-	TSC_hg19_v1_chr14_+_23299095 AK096946 NM_178336 NM_180982 NM_181304 NM_181305 NM_181306 NM_181307	11587	+	TSC_hg19_v1_chr14_+_23299104 AK292011 AK000450 BX248749 BC055381 BC068070	11606	+	AB020532|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX161519|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126105|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK025377|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK096946|MRPL52|122704|mitochondrial ribosomal protein L52##NM_178336|MRPL52|122704|mitochondrial ribosomal protein L52##NM_180982|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181304|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181305|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181306|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181307|MRPL52|122704|mitochondrial ribosomal protein L52##AK292011|MRPL52|122704|mitochondrial ribosomal protein L52##AK000450|MRPL52|122704|mitochondrial ribosomal protein L52##BX248749|MRPL52|122704|mitochondrial ribosomal protein L52##BC055381|MRPL52|122704|mitochondrial ribosomal protein L52##BC068070|MRPL52|122704|mitochondrial ribosomal protein L52	0.101226	
chr20	3098693	3098800	reg1012273.p1	9.731	+	AF031476 M25647 X03172 BC126196 BC126224 BC018062 NM_000490	-33394	-	X03173 TSC_hg19_v1_chr20_+_3052956	-45849	+	BC069144 NM_000915 BC101841 BC101843 M25650 AB463993 M62611	-46427	+	BC000515 TSC_hg19_v1_chr20_-_3140500 AK222876 AK301748 BC064544 BC011856	41742	-	TSC_hg19_v1_chr20_-_3140509 AK022444 AK023211 BC046122	41768	-	AB020667 TSC_hg19_v1_chr20_-_3140529 AK222570 BC007413 NM_021826 NM_014948 NM_199415	41790	-	AF031476|AVP|551|arginine vasopressin##M25647|AVP|551|arginine vasopressin##X03172|AVP|551|arginine vasopressin##BC126196|AVP|551|arginine vasopressin##BC126224|AVP|551|arginine vasopressin##BC018062|AVP|551|arginine vasopressin##NM_000490|AVP|551|arginine vasopressin##X03173|OXT|5020|oxytocin, prepropeptide##BC069144|OXT|5020|oxytocin, prepropeptide##NM_000915|OXT|5020|oxytocin, prepropeptide##BC101841|OXT|5020|oxytocin, prepropeptide##BC101843|OXT|5020|oxytocin, prepropeptide##M25650|OXT|5020|oxytocin, prepropeptide##M62611|OXT|5020|oxytocin, prepropeptide##BC000515|UBOX5|22888|U-box domain containing 5##AK222876|UBOX5|22888|U-box domain containing 5##AK301748|FASTKD5|60493|FAST kinase domains 5##BC064544|UBOX5|22888|U-box domain containing 5##BC011856|FASTKD5|60493|FAST kinase domains 5##AK022444|UBOX5|22888|U-box domain containing 5##AK023211|FASTKD5|60493|FAST kinase domains 5##BC046122|UBOX5|22888|U-box domain containing 5##AB020667|UBOX5|22888|U-box domain containing 5##AK222570|UBOX5|22888|U-box domain containing 5##BC007413|FASTKD5|60493|FAST kinase domains 5##NM_021826|FASTKD5|60493|FAST kinase domains 5##NM_014948|UBOX5|22888|U-box domain containing 5##NM_199415|UBOX5|22888|U-box domain containing 5	0.015876	
chr6	37503604	37503717	reg1009459.p1	9.731	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-35964	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-36008	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-100223	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	162046	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	283630	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	284030	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.0	
chr8	99097894	99098037	reg1014687.p1	9.731	+	AK096872 NM_001170806 NM_173549 BC062359	-21188	+	BC095426 TSC_hg19_v1_chr8_-_99057774 AK312102 D28438 AK308890 NM_000989	-40169	-	L05095 TSC_hg19_v1_chr8_-_99057755	-40212	-	CR456844 CR541652 DQ892797 DQ896044 TSC_hg19_v1_chr8_-_99129361	31378	-	BC010280 TSC_hg19_v1_chr8_-_99129395 BC093059 BC012592 NM_005836 X95384	31436	-	TSC_hg19_v1_chr8_+_99129543 NM_001145860 NM_001145861 X99302 AK291434	31573	+	AK096872|C8orf47|203111|chromosome 8 open reading frame 47##NM_001170806|C8orf47|203111|chromosome 8 open reading frame 47##NM_173549|C8orf47|203111|chromosome 8 open reading frame 47##BC062359|C8orf47|203111|chromosome 8 open reading frame 47##BC095426|RPL30|6156|ribosomal protein L30##AK312102|RPL30|6156|ribosomal protein L30##D28438|RPL30|6156|ribosomal protein L30##AK308890|RPL30|6156|ribosomal protein L30##NM_000989|RPL30|6156|ribosomal protein L30##L05095|RPL30|6156|ribosomal protein L30##CR456844|HRSP12|10247|heat-responsive protein 12##CR541652|HRSP12|10247|heat-responsive protein 12##DQ892797|HRSP12|10247|heat-responsive protein 12##DQ896044|HRSP12|10247|heat-responsive protein 12##BC010280|HRSP12|10247|heat-responsive protein 12##BC093059|HRSP12|10247|heat-responsive protein 12##BC012592|HRSP12|10247|heat-responsive protein 12##NM_005836|HRSP12|10247|heat-responsive protein 12##X95384|HRSP12|10247|heat-responsive protein 12##NM_001145860|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001145861|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##X99302|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##AK291434|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)	0.76678	CTCF.p2:-11:0.767
chr1	54738749	54738860	reg1011673.p1	9.730	+	TSC_hg19_v1_chr1_+_54665866 AF151069 AF325707 AY421759 BC000041 CU674006	-72914	+	TSC_hg19_v1_chr1_+_54665855 AK026171	-72951	+	AK024572 NM_016491 TSC_hg19_v1_chr1_+_54665839	-72962	+	CU688156 AK289474 BC003605 BC127866 BC066365 TSC_hg19_v1_chr1_-_54871828 AF500116	132984	-	NM_018070 NM_145716 TSC_hg19_v1_chr1_-_54872066	133218	-	TSC_hg19_v1_chr1_-_54872087 NM_001009955	133280	-	AF151069|MRPL37|51253|mitochondrial ribosomal protein L37##AF325707|MRPL37|51253|mitochondrial ribosomal protein L37##AY421759|MRPL37|51253|mitochondrial ribosomal protein L37##BC000041|MRPL37|51253|mitochondrial ribosomal protein L37##AK026171|MRPL37|51253|mitochondrial ribosomal protein L37##AK024572|MRPL37|51253|mitochondrial ribosomal protein L37##NM_016491|MRPL37|51253|mitochondrial ribosomal protein L37##AK289474|SSBP3|23648|single stranded DNA binding protein 3##BC003605|SSBP3|23648|single stranded DNA binding protein 3##BC066365|SSBP3|23648|single stranded DNA binding protein 3##AF500116|SSBP3|23648|single stranded DNA binding protein 3##NM_018070|SSBP3|23648|single stranded DNA binding protein 3##NM_145716|SSBP3|23648|single stranded DNA binding protein 3##NM_001009955|SSBP3|23648|single stranded DNA binding protein 3	0.0	
chr2	232277194	232277315	reg1013260.p1	9.730	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	-16832	+	TSC_hg19_v1_chr2_+_232120778 AB055779	-156476	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-213860	+	AK001314 TSC_hg19_v1_chr2_-_232326464	49175	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	51881	-	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	51981	-	AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AY929062|ARMC9|80210|armadillo repeat containing 9##AK001314|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin##BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin	0.871828	CTCF.p2:-23:0.685
chr9	15873715	15873828	reg1014397.p1	9.730	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-320750	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-362811	-	AF098483 AF098482 NM_021144	-363524	-	TSC_hg19_v1_chr9_-_16727889 AY438376	854126	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	996896	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	996995	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.998593	CTCF.p2:-8:0.999
chr10	22548361	22548497	reg1015171.p1	9.729	+	TSC_hg19_v1_chr10_+_22540999 AK094582	-7416	+	NM_001199938	-49518	-	TSC_hg19_v1_chr10_-_22292660 BC110894 NM_022365 AK308369	-255764	-	TSC_hg19_v1_chr10_+_22605316 NM_001204062 NM_012071 BX647275 AF201948 BC022898 AF078848 AK128789 AK313235 AK295109 AY542159	56896	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	61736	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	86027	+	AK094582|LOC100130992|100130992|uncharacterized LOC100130992##NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1##BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_001204062|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough##NM_012071|COMMD3|23412|COMM domain containing 3##BX647275|COMMD3|23412|COMM domain containing 3##AF201948|COMMD3|23412|COMM domain containing 3##BC022898|COMMD3|23412|COMM domain containing 3##AF078848|COMMD3|23412|COMM domain containing 3##AK128789|COMMD3|23412|COMM domain containing 3##AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough##AY542159|COMMD3|23412|COMM domain containing 3##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6	0.0	
chr11	59590588	59590713	reg1012873.p2	9.729	+	CR457117 CU674518 TSC_hg19_v1_chr11_-_59578247 BC001040 BC019269 AB049642 AK000491 AF183428 NM_017840	-12413	-	TSC_hg19_v1_chr11_+_59522917 AK312909 AK297419 AK290251 U32315 CU675647 HQ447354 AB464272 AJ002076 BT006666	-67659	+	TSC_hg19_v1_chr11_+_59522849 AK293494 BC007405 BC007429	-67803	+	CU691524 DQ892469 DQ895682 AK301290 AK301295 X76562 BC037958 NM_005142 AK314275	22308	-	DQ892807 DQ896054 AK292990 BC018632 J05068 NM_001062	43341	-	BC048121 NM_173801 AK093517 AX748179 BC036256	217164	+	CR457117|MRPL16|54948|mitochondrial ribosomal protein L16##BC001040|MRPL16|54948|mitochondrial ribosomal protein L16##BC019269|MRPL16|54948|mitochondrial ribosomal protein L16##AB049642|MRPL16|54948|mitochondrial ribosomal protein L16##AK000491|MRPL16|54948|mitochondrial ribosomal protein L16##AF183428|MRPL16|54948|mitochondrial ribosomal protein L16##NM_017840|MRPL16|54948|mitochondrial ribosomal protein L16##AK312909|STX3|6809|syntaxin 3##AK297419|STX3|6809|syntaxin 3##AK290251|STX3|6809|syntaxin 3##U32315|STX3|6809|syntaxin 3##HQ447354|STX3|6809|syntaxin 3##AJ002076|STX3|6809|syntaxin 3##BT006666|STX3|6809|syntaxin 3##AK293494|STX3|6809|syntaxin 3##BC007405|STX3|6809|syntaxin 3##BC007429|STX3|6809|syntaxin 3##DQ892469|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##DQ895682|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##AK301290|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##AK301295|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##X76562|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##BC037958|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##NM_005142|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##AK314275|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##DQ892807|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##DQ896054|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##AK292990|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##BC018632|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##J05068|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##NM_001062|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##BC048121|PLAC1L|219990|placenta-specific 1-like##NM_173801|PLAC1L|219990|placenta-specific 1-like##AK093517|PLAC1L|219990|placenta-specific 1-like##BC036256|PLAC1L|219990|placenta-specific 1-like	0.942868	CTCF.p2:-5:0.943
chr8	87100891	87101031	reg1014865.p1	9.729	+	AY037806 HQ258398 NM_033126 BC126180 BC126182 BC144195	-19074	-	NM_172239	-311656	-	NM_172239	-525236	-	BC065207 TSC_hg19_v1_chr8_+_87111138 AK096027 NM_152565 AY079172	10183	+	AJ417661 BC125165 BC125166 AK055815 NM_138817 BC029436	141597	-	TSC_hg19_v1_chr8_+_87354966 AY345857 AK292800 BC036065 NM_007013	254089	+	AY037806|PSKH2|85481|protein serine kinase H2##HQ258398|PSKH2|85481|protein serine kinase H2##NM_033126|PSKH2|85481|protein serine kinase H2##BC126180|PSKH2|85481|protein serine kinase H2##BC126182|PSKH2|85481|protein serine kinase H2##BC144195|PSKH2|85481|protein serine kinase H2##NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1##NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1##BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AJ417661|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC125165|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC125166|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##AK055815|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##NM_138817|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC029436|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##AY345857|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##AK292800|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##BC036065|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##NM_007013|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1	0.829112	CTCF.p2:16:0.829
chrX	19058602	19058763	reg1014278.p1	9.729	+	TSC_hg19_v1_chrX_-_19002476 NM_000292	-56220	-	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	-349638	+	AB464151 AF014459 DQ426892 NM_000330	-368478	-	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	81985	-	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	303400	+	NM_001001671	474696	-	NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001001671|MAP3K15|389840|mitogen-activated protein kinase kinase kinase 15	0.944624	CTCF.p2:-11:0.945
chr1	218695053	218695181	reg1010417.p1	9.728	+	M19154 TSC_hg19_v1_chr1_+_218519634	-175512	+	NM_001135599 NM_003238 TSC_hg19_v1_chr1_+_218518677 AB209842	-176406	+	AK290066 BC003668 TSC_hg19_v1_chr1_+_218458652 BC020641 AF151873	-236448	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	652041	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	652125	+	BC036078 TSC_hg19_v1_chr1_-_220101540	1406412	-	M19154|TGFB2|7042|transforming growth factor, beta 2##NM_001135599|TGFB2|7042|transforming growth factor, beta 2##NM_003238|TGFB2|7042|transforming growth factor, beta 2##AB209842|TGFB2|7042|transforming growth factor, beta 2##AK290066|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC003668|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC020641|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AF151873|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##BC036078|SLC30A10|55532|solute carrier family 30, member 10	0.986173	CTCF.p2:-1:0.986
chr16	48089045	48089169	reg1013728.p1	9.728	+	TSC_hg19_v1_chr16_+_47495241 X84908 CR936710 BC033657 AK309226	-593868	+	TSC_hg19_v1_chr16_+_47495206 NM_000293 NM_001031835 AK298588	-593919	+	TSC_hg19_v1_chr16_-_47495158 AF212247 AK301908	-593950	-	AY196326 AY040220 NM_033226	91513	-	AY040219 NM_033151	177074	-	AF367202 AF411579 NM_032583 NM_145186	179980	-	X84908|PHKB|5257|phosphorylase kinase, beta##CR936710|PHKB|5257|phosphorylase kinase, beta##BC033657|PHKB|5257|phosphorylase kinase, beta##AK309226|PHKB|5257|phosphorylase kinase, beta##NM_000293|PHKB|5257|phosphorylase kinase, beta##NM_001031835|PHKB|5257|phosphorylase kinase, beta##AF212247|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK301908|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AY196326|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040220|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##NM_033226|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040219|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_033151|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF367202|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF411579|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_032583|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_145186|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11	0.660319	CTCF.p2:10:0.660
chr3	196264330	196264463	reg1015542.p1	9.728	+	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	-22183	-	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	-33818	-	TSC_hg19_v1_chr3_-_196159304 NM_015562	-105063	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	30994	-	AK025697 TSC_hg19_v1_chr3_+_196295533	31111	+	TSC_hg19_v1_chr3_+_196295733 NM_001105573	31336	+	AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##NM_015562|UBXN7|26043|UBX domain protein 7##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53##AK025697|FBXO45|200933|F-box protein 45##NM_001105573|FBXO45|200933|F-box protein 45	0.728864	CTCF.p2:-6:0.729
chr11	46941534	46941664	reg1012632.p1	9.727	+	TSC_hg19_v1_chr11_-_46940102 AB384531 AB231861 BC136667 BC136668 AB084910 NM_002334 BC110808	-1537	-	TSC_hg19_v1_chr11_-_46867841 NM_001008938 NM_014756	-73746	-	TSC_hg19_v1_chr11_-_46867830 BC111043 AK092678 AX747668 BC017856 BC070136	-73787	-	TSC_hg19_v1_chr11_+_46958328 AK316318 NM_001003676 NM_001003677 NM_001003678 NM_024113 AK315639 BC001860 BC009455 AL136575 BC052291 BC013988 AK300813 AK025863 AK293609 AB528079 AM393584 AM393807 CR457351 CU679361 CU680726	16693	+	AK301785 AL834337 EU832352 EU832437 AK300347 BC036823 AK027482 TSC_hg19_v1_chr11_-_47198413 AK304541 BC030148	256800	-	TSC_hg19_v1_chr11_-_47198431 AK315992 AK098324	256834	-	AB231861|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136667|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136668|LRP4|4038|low density lipoprotein receptor-related protein 4##AB084910|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_002334|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_001008938|CKAP5|9793|cytoskeleton associated protein 5##NM_014756|CKAP5|9793|cytoskeleton associated protein 5##BC111043|CKAP5|9793|cytoskeleton associated protein 5##BC017856|CKAP5|9793|cytoskeleton associated protein 5##BC070136|CKAP5|9793|cytoskeleton associated protein 5##AK316318|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003676|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003677|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003678|C11orf49|79096|chromosome 11 open reading frame 49##NM_024113|C11orf49|79096|chromosome 11 open reading frame 49##AK315639|C11orf49|79096|chromosome 11 open reading frame 49##BC001860|C11orf49|79096|chromosome 11 open reading frame 49##BC009455|C11orf49|79096|chromosome 11 open reading frame 49##AL136575|C11orf49|79096|chromosome 11 open reading frame 49##BC052291|C11orf49|79096|chromosome 11 open reading frame 49##BC013988|C11orf49|79096|chromosome 11 open reading frame 49##AK300813|C11orf49|79096|chromosome 11 open reading frame 49##AK025863|C11orf49|79096|chromosome 11 open reading frame 49##AK293609|C11orf49|79096|chromosome 11 open reading frame 49##AM393584|C11orf49|79096|chromosome 11 open reading frame 49##AM393807|C11orf49|79096|chromosome 11 open reading frame 49##CR457351|C11orf49|79096|chromosome 11 open reading frame 49##AK301785|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AL834337|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832352|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832437|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300347|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC036823|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK027482|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK304541|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC030148|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK315992|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK098324|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2	0.030699	
chr13	27949990	27950123	reg1016366.p1	9.727	+	TSC_hg19_v1_chr13_+_27844966 HQ258126	-105049	+	AY439004 NM_206827	-105593	+	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	-124314	+	BC143711 D32257 NM_002097 TSC_hg19_v1_chr13_+_27998761 AB590496 U14134 U20272	48715	+	TSC_hg19_v1_chr13_-_28024327 BC039599 NM_001166262 NM_001166261	74253	-	AF265440 TSC_hg19_v1_chr13_-_28024702 BC046166 NM_001166263 NM_152912	74666	-	HQ258126|RASL11A|387496|RAS-like, family 11, member A##AY439004|RASL11A|387496|RAS-like, family 11, member A##NM_206827|RASL11A|387496|RAS-like, family 11, member A##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21##BC143711|GTF3A|2971|general transcription factor IIIA##D32257|GTF3A|2971|general transcription factor IIIA##NM_002097|GTF3A|2971|general transcription factor IIIA##U14134|GTF3A|2971|general transcription factor IIIA##U20272|GTF3A|2971|general transcription factor IIIA##BC039599|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166262|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166261|MTIF3|219402|mitochondrial translational initiation factor 3##BC046166|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166263|MTIF3|219402|mitochondrial translational initiation factor 3##NM_152912|MTIF3|219402|mitochondrial translational initiation factor 3	0.875093	CTCF.p2:-4:0.875
chr4	63461120	63461231	reg1012751.p1	9.727	+	NM_015236	-1098337	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-1394200	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-5484607	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	1813921	-	AK307826 NM_004439 NM_182472	3074477	-	TSC_hg19_v1_chr4_-_66536182 AB209375	3075022	-	NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.830056	CTCF.p2:-23:0.830
chr3	113563600	113563731	reg1012279.p1	9.726	+	BC035040 NM_017577 TSC_hg19_v1_chr3_+_113557732 AK293884 AK292846	-5954	+	TSC_hg19_v1_chr3_+_113465913 BC013138 AF113129	-97741	+	TSC_hg19_v1_chr3_+_113465902 AK314779	-97761	+	AK304142 NM_001172105 AY358725 AK292964	52694	+	TSC_hg19_v1_chr3_+_113666756 BC035230 NM_173570 AK127996 AK127025	103062	+	AK125304 AK295855 AK302488 BC150592 AF509494 NM_020817	211746	-	BC035040|GRAMD1C|54762|GRAM domain containing 1C##NM_017577|GRAMD1C|54762|GRAM domain containing 1C##AK293884|GRAMD1C|54762|GRAM domain containing 1C##AK292846|GRAMD1C|54762|GRAM domain containing 1C##BC013138|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##AF113129|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##AK314779|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##AK304142|GRAMD1C|54762|GRAM domain containing 1C##NM_001172105|GRAMD1C|54762|GRAM domain containing 1C##AY358725|GRAMD1C|54762|GRAM domain containing 1C##AK292964|GRAMD1C|54762|GRAM domain containing 1C##BC035230|ZDHHC23|254887|zinc finger, DHHC-type containing 23##NM_173570|ZDHHC23|254887|zinc finger, DHHC-type containing 23##AK127996|ZDHHC23|254887|zinc finger, DHHC-type containing 23##AK127025|ZDHHC23|254887|zinc finger, DHHC-type containing 23##AK125304|KIAA1407|57577|KIAA1407##AK295855|KIAA1407|57577|KIAA1407##AK302488|KIAA1407|57577|KIAA1407##BC150592|KIAA1407|57577|KIAA1407##AF509494|KIAA1407|57577|KIAA1407##NM_020817|KIAA1407|57577|KIAA1407	0.065477	
chr11	69500775	69500893	reg1012922.p1	9.725	+	TSC_hg19_v1_chr11_-_69490116 BC065542 AK294004 AF503940 AK311918 NM_153451 AK026600	-10696	-	EF639695 BC006448 BC019024 AK054816 AK125280 TSC_hg19_v1_chr11_-_69490092	-10781	-	TSC_hg19_v1_chr11_+_69467221 AB075505	-33547	+	AF110400 AY358302 NM_005117	18271	-	M17446 NM_002007	89336	-	NM_005247	133357	-	BC065542|ORAOV1|220064|oral cancer overexpressed 1##AK294004|ORAOV1|220064|oral cancer overexpressed 1##AF503940|ORAOV1|220064|oral cancer overexpressed 1##AK311918|ORAOV1|220064|oral cancer overexpressed 1##NM_153451|ORAOV1|220064|oral cancer overexpressed 1##AK026600|ORAOV1|220064|oral cancer overexpressed 1##EF639695|ORAOV1|220064|oral cancer overexpressed 1##BC006448|ORAOV1|220064|oral cancer overexpressed 1##BC019024|ORAOV1|220064|oral cancer overexpressed 1##AK125280|ORAOV1|220064|oral cancer overexpressed 1##AB075505|CCND1|595|cyclin D1##AF110400|FGF19|9965|fibroblast growth factor 19##AY358302|FGF19|9965|fibroblast growth factor 19##NM_005117|FGF19|9965|fibroblast growth factor 19##M17446|FGF4|2249|fibroblast growth factor 4##NM_002007|FGF4|2249|fibroblast growth factor 4##NM_005247|FGF3|2248|fibroblast growth factor 3	0.424836	CTCF.p2:-27:0.425
chr5	148810745	148810848	reg1011905.p1	9.725	+	TSC_hg19_v1_chr5_+_148786440 AK126481 CR933654 BX640700	-24314	+	AB590699 CR457192 BC113925 BC113946 AF152098 AF184969 AF218727 AY358931 AF110385 AF212311 NM_014443 TSC_hg19_v1_chr5_-_148758856	-51974	-	TSC_hg19_v1_chr5_+_148737613 AF451985 BC000014	-73173	+	AF218004 TSC_hg19_v1_chr5_-_148930935 AK303794 BC021971 BC025371 BC007246	120128	-	TSC_hg19_v1_chr5_-_148930950 AK294942	120170	-	TSC_hg19_v1_chr5_-_148931006 NM_001025105 NM_001892	120210	-	AK126481|MIR143HG|728264|MIR143 host gene (non-protein coding)##CR933654|MIR143HG|728264|MIR143 host gene (non-protein coding)##CR457192|IL17B|27190|interleukin 17B##BC113925|IL17B|27190|interleukin 17B##BC113946|IL17B|27190|interleukin 17B##AF152098|IL17B|27190|interleukin 17B##AF184969|IL17B|27190|interleukin 17B##AF218727|IL17B|27190|interleukin 17B##AY358931|IL17B|27190|interleukin 17B##AF110385|IL17B|27190|interleukin 17B##AF212311|IL17B|27190|interleukin 17B##NM_014443|IL17B|27190|interleukin 17B##AF451985|PCYOX1L|78991|prenylcysteine oxidase 1 like##BC000014|PCYOX1L|78991|prenylcysteine oxidase 1 like##AF218004|CSNK1A1|1452|casein kinase 1, alpha 1##AK303794|CSNK1A1|1452|casein kinase 1, alpha 1##BC021971|CSNK1A1|1452|casein kinase 1, alpha 1##BC025371|CSNK1A1|1452|casein kinase 1, alpha 1##BC007246|CSNK1A1|1452|casein kinase 1, alpha 1##AK294942|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001025105|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001892|CSNK1A1|1452|casein kinase 1, alpha 1	0.930026	CTCF.p2:12:0.930
chr17	29025025	29025164	reg1015017.p1	9.724	+	BC096718 BC098126 BC098273 NM_015594	-138511	+	TSC_hg19_v1_chr17_+_28804434 AK000606 AK291381 NM_001007024 NM_001007025 NM_004871 AK298714 AF047438 BC012620 AF073926 BC040471	-220661	+	AK316409 NM_001199775 AK302878	-317579	+	TSC_hg19_v1_chr17_+_29058664 BC047718	33594	+	TSC_hg19_v1_chr17_-_29151711 DQ298450 DQ892276 CU692798 AK296238 AF046059 BC023567	126581	-	TSC_hg19_v1_chr17_-_29151725 AK313315 NM_015986	126669	-	BC096718|TBC1D29|26083|TBC1 domain family, member 29##BC098126|TBC1D29|26083|TBC1 domain family, member 29##BC098273|TBC1D29|26083|TBC1 domain family, member 29##NM_015594|TBC1D29|26083|TBC1 domain family, member 29##AK000606|GOSR1|9527|golgi SNAP receptor complex member 1##AK291381|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1##NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1##AK298714|GOSR1|9527|golgi SNAP receptor complex member 1##AF047438|GOSR1|9527|golgi SNAP receptor complex member 1##BC012620|GOSR1|9527|golgi SNAP receptor complex member 1##AF073926|GOSR1|9527|golgi SNAP receptor complex member 1##BC040471|GOSR1|9527|golgi SNAP receptor complex member 1##AK316409|CPD|1362|carboxypeptidase D##NM_001199775|CPD|1362|carboxypeptidase D##AK302878|CPD|1362|carboxypeptidase D##BC047718|SUZ12P|440423|suppressor of zeste 12 homolog pseudogene##DQ298450|CRLF3|51379|cytokine receptor-like factor 3##DQ892276|CRLF3|51379|cytokine receptor-like factor 3##AK296238|CRLF3|51379|cytokine receptor-like factor 3##AF046059|CRLF3|51379|cytokine receptor-like factor 3##BC023567|CRLF3|51379|cytokine receptor-like factor 3##AK313315|CRLF3|51379|cytokine receptor-like factor 3##NM_015986|CRLF3|51379|cytokine receptor-like factor 3	0.0	
chr3	24815401	24815524	reg1014074.p1	9.724	+	AY286470 TSC_hg19_v1_chr3_-_24536493	-278985	-	GQ456948 GQ456949 GQ869479 GQ919288 AY286469 AY286468 AY286465 AY286471 TSC_hg19_v1_chr3_-_24536294 AY286467 AY286466 AK096628 M26747 NM_000461 NM_001128176 NM_001128177 NM_001252634 X04707	-279218	-	TSC_hg19_v1_chr3_+_23987516 AK301925 NM_001145425	-827900	+	TSC_hg19_v1_chr3_+_25469751 AF157483 NM_016152	654297	+	BC030234 NM_000965 TSC_hg19_v1_chr3_+_25469854 X07282 Y00291	654405	+	TSC_hg19_v1_chr3_+_25470068 BC060794 AK292032 AB590663 CU687428 AB307688 HQ692864	654682	+	AY286470|THRB|7068|thyroid hormone receptor, beta##GQ456948|THRB|7068|thyroid hormone receptor, beta##GQ456949|THRB|7068|thyroid hormone receptor, beta##GQ869479|THRB|7068|thyroid hormone receptor, beta##GQ919288|THRB|7068|thyroid hormone receptor, beta##AY286469|THRB|7068|thyroid hormone receptor, beta##AY286468|THRB|7068|thyroid hormone receptor, beta##AY286465|THRB|7068|thyroid hormone receptor, beta##AY286471|THRB|7068|thyroid hormone receptor, beta##AY286467|THRB|7068|thyroid hormone receptor, beta##AY286466|THRB|7068|thyroid hormone receptor, beta##AK096628|THRB|7068|thyroid hormone receptor, beta##M26747|THRB|7068|thyroid hormone receptor, beta##NM_000461|THRB|7068|thyroid hormone receptor, beta##NM_001128176|THRB|7068|thyroid hormone receptor, beta##NM_001128177|THRB|7068|thyroid hormone receptor, beta##NM_001252634|THRB|7068|thyroid hormone receptor, beta##X04707|THRB|7068|thyroid hormone receptor, beta##AK301925|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001145425|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##AF157483|RARB|5915|retinoic acid receptor, beta##NM_016152|RARB|5915|retinoic acid receptor, beta##BC030234|RARB|5915|retinoic acid receptor, beta##NM_000965|RARB|5915|retinoic acid receptor, beta##X07282|RARB|5915|retinoic acid receptor, beta##Y00291|RARB|5915|retinoic acid receptor, beta##BC060794|RARB|5915|retinoic acid receptor, beta##AK292032|RARB|5915|retinoic acid receptor, beta##AB307688|RARB|5915|retinoic acid receptor, beta##HQ692864|RARB|5915|retinoic acid receptor, beta	0.0	
chr6	111332968	111333105	reg1011558.p1	9.724	+	AK292165 TSC_hg19_v1_chr6_+_111303240 AK024740 AK301662 AL833613 BC005347 BC035314 NM_032194 CU690066	-29762	+	BC011593 TSC_hg19_v1_chr6_+_111279945 AK057977 EF137904	-53078	+	AF361492 AF361496 NM_138408 BC104655 TSC_hg19_v1_chr6_+_111279890	-53206	+	TSC_hg19_v1_chr6_+_111408673 AK126183 BC034031	75640	+	AB057445 NM_018593 BC066985 TSC_hg19_v1_chr6_+_111408810	75759	+	NM_153369 TSC_hg19_v1_chr6_+_111580541 AK093136 AX747946 AK292735 AK315016	247487	+	AK292165|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK024740|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK301662|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AL833613|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC005347|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC035314|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##NM_032194|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC011593|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AK057977|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##EF137904|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AK126183|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC034031|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##AB057445|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##NM_018593|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC066985|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##NM_153369|KIAA1919|91749|KIAA1919##AK093136|KIAA1919|91749|KIAA1919##AK292735|KIAA1919|91749|KIAA1919##AK315016|KIAA1919|91749|KIAA1919	0.99479	CTCF.p2:-2:0.995
chr10	85974470	85974573	reg1012077.p1	9.723	+	AB593154 TSC_hg19_v1_chr10_+_85954408 AB593155 BC038799 NM_001171971 NM_033100 AB463200 AB053448	-20068	+	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	-40962	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	-42729	-	BX648524 NM_001017924 BC140765 BC144475	10792	-	AB463829 AB031547 NM_015613 DQ426882 DQ426881	26746	-	BX641033 NM_001012720 NM_001012722 NM_002921 U14910 BC011349 BC008094 BC042536 CU675929 DQ892074 DQ895267	30306	+	AB593154|CDHR1|92211|cadherin-related family member 1##AB593155|CDHR1|92211|cadherin-related family member 1##BC038799|CDHR1|92211|cadherin-related family member 1##NM_001171971|CDHR1|92211|cadherin-related family member 1##NM_033100|CDHR1|92211|cadherin-related family member 1##AB053448|CDHR1|92211|cadherin-related family member 1##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##BX648524|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##NM_001017924|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC140765|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC144475|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##AB031547|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##NM_015613|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##BX641033|RGR|5995|retinal G protein coupled receptor##NM_001012720|RGR|5995|retinal G protein coupled receptor##NM_001012722|RGR|5995|retinal G protein coupled receptor##NM_002921|RGR|5995|retinal G protein coupled receptor##U14910|RGR|5995|retinal G protein coupled receptor##BC011349|RGR|5995|retinal G protein coupled receptor##BC008094|RGR|5995|retinal G protein coupled receptor##BC042536|RGR|5995|retinal G protein coupled receptor##DQ892074|RGR|5995|retinal G protein coupled receptor##DQ895267|RGR|5995|retinal G protein coupled receptor	0.996244	CTCF.p2:7:0.996
chr19	51661807	51661926	reg1003316.p1	9.722	+	TSC_hg19_v1_chr19_+_51645559 NM_014385 NM_016543 AK314875 AF193441 BC028150 AJ007395 AF178981 AF170485 AJ130710 AJ130711 AJ130712 AJ130713	-16275	+	NM_001198558 NM_014441 AF227924 AK297043 BC035365 AB026265 AY358913 AK315272 AF247180 DQ892476 DQ895688	-33647	+	TSC_hg19_v1_chr19_-_51611637 AK291173 NM_145232	-50225	-	AK293934 TSC_hg19_v1_chr19_+_51728362 NM_001082618 NM_001177608 NM_001772 AK309558 M23197 AY162464	66477	+	BC028152 AK304810 TSC_hg19_v1_chr19_+_51728370 AB590304 DQ891726 DQ894903	66505	+	AK097554 NM_173635	99097	+	NM_014385|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##NM_016543|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AK314875|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF193441|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##BC028150|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ007395|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF178981|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF170485|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130710|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130711|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130712|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130713|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##NM_001198558|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##NM_014441|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AF227924|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK297043|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##BC035365|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AB026265|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AY358913|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK315272|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AF247180|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##DQ892476|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##DQ895688|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK291173|CTU1|90353|cytosolic thiouridylase subunit 1 homolog (S. pombe)##NM_145232|CTU1|90353|cytosolic thiouridylase subunit 1 homolog (S. pombe)##AK293934|CD33|945|CD33 molecule##NM_001082618|CD33|945|CD33 molecule##NM_001177608|CD33|945|CD33 molecule##NM_001772|CD33|945|CD33 molecule##AK309558|CD33|945|CD33 molecule##M23197|CD33|945|CD33 molecule##AY162464|CD33|945|CD33 molecule##BC028152|CD33|945|CD33 molecule##AK304810|CD33|945|CD33 molecule##DQ891726|CD33|945|CD33 molecule##DQ894903|CD33|945|CD33 molecule##AK097554|C19orf75|284369|chromosome 19 open reading frame 75##NM_173635|C19orf75|284369|chromosome 19 open reading frame 75	1.014287	CTCF.p2:-10:0.981
chr21	45724926	45725067	reg1013266.p1	9.722	+	TSC_hg19_v1_chr21_+_45719971 BC008964 BC009919 BC006422 AK091488 AX747017 BC007536 AB209127 CU675691 CU679201	-5016	+	TSC_hg19_v1_chr21_+_45719955 AK303605 AK308437	-5040	+	TSC_hg19_v1_chr21_+_45719932 NM_002626 X15573	-5069	+	TSC_hg19_v1_chr21_+_45725068 CU675401 AB528282 DQ893435 DQ896792	137	+	BC004920 TSC_hg19_v1_chr21_+_45736378	11369	+	CU689146 Z93322 TSC_hg19_v1_chr21_-_45759141 Y11392	34134	-	BC008964|PFKL|5211|phosphofructokinase, liver##BC009919|PFKL|5211|phosphofructokinase, liver##BC006422|PFKL|5211|phosphofructokinase, liver##AK091488|PFKL|5211|phosphofructokinase, liver##BC007536|PFKL|5211|phosphofructokinase, liver##AB209127|PFKL|5211|phosphofructokinase, liver##AK303605|PFKL|5211|phosphofructokinase, liver##AK308437|PFKL|5211|phosphofructokinase, liver##NM_002626|PFKL|5211|phosphofructokinase, liver##X15573|PFKL|5211|phosphofructokinase, liver##DQ893435|PFKL|5211|phosphofructokinase, liver##DQ896792|PFKL|5211|phosphofructokinase, liver##BC004920|PFKL|5211|phosphofructokinase, liver##Z93322|C21orf2|755|chromosome 21 open reading frame 2##Y11392|C21orf2|755|chromosome 21 open reading frame 2	1.041287	CTCF.p2:17:0.998
chr12	10078520	10078649	reg1012736.p1	9.721	+	GQ398770 NM_001190765	-44497	+	NM_005127	-56127	-	X96719 AY142147 AB015628 BC005254 AK311232 TSC_hg19_v1_chr12_-_10021954 AK313916 AK307334	-56626	-	EU095393 EU095394 AY359126 EF127467 NM_001130711	6358	-	AY547296 NM_001207010	25330	+	NM_138337 NM_201623 AK314001 BC126289 BC126291 AF247788 BC063424 BC027967 AY426759 AY498550 AY498551 AY498552 CU687708 HQ258146	45517	+	GQ398770|KLRF2|100431172|killer cell lectin-like receptor subfamily F, member 2##NM_001190765|KLRF2|100431172|killer cell lectin-like receptor subfamily F, member 2##NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B##X96719|CLEC2B|9976|C-type lectin domain family 2, member B##AY142147|CLEC2B|9976|C-type lectin domain family 2, member B##AB015628|CLEC2B|9976|C-type lectin domain family 2, member B##BC005254|CLEC2B|9976|C-type lectin domain family 2, member B##AK311232|CLEC2B|9976|C-type lectin domain family 2, member B##AK313916|CLEC2B|9976|C-type lectin domain family 2, member B##AK307334|CLEC2B|9976|C-type lectin domain family 2, member B##EU095393|CLEC2A|387836|C-type lectin domain family 2, member A##EU095394|CLEC2A|387836|C-type lectin domain family 2, member A##AY359126|CLEC2A|387836|C-type lectin domain family 2, member A##EF127467|CLEC2A|387836|C-type lectin domain family 2, member A##NM_001130711|CLEC2A|387836|C-type lectin domain family 2, member A##AY547296|CLEC12A|160364|C-type lectin domain family 12, member A##NM_001207010|CLEC12A|160364|C-type lectin domain family 12, member A##NM_138337|CLEC12A|160364|C-type lectin domain family 12, member A##NM_201623|CLEC12A|160364|C-type lectin domain family 12, member A##AK314001|CLEC12A|160364|C-type lectin domain family 12, member A##BC126289|CLEC12A|160364|C-type lectin domain family 12, member A##BC126291|CLEC12A|160364|C-type lectin domain family 12, member A##AF247788|CLEC12A|160364|C-type lectin domain family 12, member A##BC063424|CLEC12A|160364|C-type lectin domain family 12, member A##BC027967|CLEC12A|160364|C-type lectin domain family 12, member A##AY426759|CLEC12A|160364|C-type lectin domain family 12, member A##AY498550|CLEC12A|160364|C-type lectin domain family 12, member A##AY498551|CLEC12A|160364|C-type lectin domain family 12, member A##AY498552|CLEC12A|160364|C-type lectin domain family 12, member A##HQ258146|CLEC12B|387837|C-type lectin domain family 12, member B	0.999522	CTCF.p2:8:1.000
chr4	55094319	55094466	reg1013987.p1	9.721	+	AB028838 EU596451 NM_133267	-128170	+	TSC_hg19_v1_chr4_-_54930773 AK312427 NM_012110	-163595	-	TSC_hg19_v1_chr4_-_54930764 AF159423 BC034691	-163657	-	NM_006206 TSC_hg19_v1_chr4_+_55095296	888	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	1072	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	429742	+	AB028838|GSX2|170825|GS homeobox 2##EU596451|GSX2|170825|GS homeobox 2##NM_133267|GSX2|170825|GS homeobox 2##AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2##AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2##BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	0.0	
chr9	43844188	43844325	reg1015907.p1	9.721	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-159413	+	NM_001145196	-213527	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-710769	-	TSC_hg19_v1_chr9_+_45441926 BC006438	1597670	+	BC040528 NM_001113541 NM_015667	21665353	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	22613045	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.969308	CTCF.p2:2:0.969
chr1	20137864	20137974	reg1013046.p1	9.720	+	TSC_hg19_v1_chr1_-_20126374 BX640987 NM_181719	-11509	-	L41147 NM_000871	-146140	+	AK309257 NM_001204086	-165660	+	CR457228 BC051880 BC030960 AK000232 AK222991 NM_019062	3762	-	TSC_hg19_v1_chr1_+_20208887 NM_015207	70945	+	TSC_hg19_v1_chr1_+_20208920 AB007928	70995	+	BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4##NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4##L41147|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##NM_000871|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##CR457228|RNF186|54546|ring finger protein 186##BC051880|RNF186|54546|ring finger protein 186##BC030960|RNF186|54546|ring finger protein 186##AK000232|RNF186|54546|ring finger protein 186##AK222991|RNF186|54546|ring finger protein 186##NM_019062|RNF186|54546|ring finger protein 186##NM_015207|OTUD3|23252|OTU domain containing 3##AB007928|OTUD3|23252|OTU domain containing 3	0.999516	CTCF.p2:-9:1.000
chr12	51663436	51663550	reg1012088.p2	9.720	+	TSC_hg19_v1_chr12_+_51632658 AB385271 CU677910 AK125855	-30821	+	TSC_hg19_v1_chr12_+_51632650 D31767 BC002334 BC007900 AK095963	-30858	+	TSC_hg19_v1_chr12_+_51632609 AK303828 AK290119 AK293330 AY430097 BX647278	-30894	+	BC120965 BC120966 BC008712 TSC_hg19_v1_chr12_-_51663988 NM_001033873 BC001400 AK001839 NM_001031628	592	-	TSC_hg19_v1_chr12_-_51717901 CU690454 AF146531	54375	-	TSC_hg19_v1_chr12_-_51717911 AK093638 AB032698 AK000783 AK225911 NM_016293	54428	-	AK125855|DAZAP2|9802|DAZ associated protein 2##D31767|DAZAP2|9802|DAZ associated protein 2##BC002334|DAZAP2|9802|DAZ associated protein 2##BC007900|DAZAP2|9802|DAZ associated protein 2##AK095963|DAZAP2|9802|DAZ associated protein 2##AK303828|DAZAP2|9802|DAZ associated protein 2##AK290119|DAZAP2|9802|DAZ associated protein 2##AK293330|DAZAP2|9802|DAZ associated protein 2##AY430097|DAZAP2|9802|DAZ associated protein 2##BX647278|DAZAP2|9802|DAZ associated protein 2##BC120965|SMAGP|57228|small cell adhesion glycoprotein##BC120966|SMAGP|57228|small cell adhesion glycoprotein##BC008712|SMAGP|57228|small cell adhesion glycoprotein##NM_001033873|SMAGP|57228|small cell adhesion glycoprotein##BC001400|SMAGP|57228|small cell adhesion glycoprotein##AK001839|SMAGP|57228|small cell adhesion glycoprotein##NM_001031628|SMAGP|57228|small cell adhesion glycoprotein##AF146531|BIN2|51411|bridging integrator 2##AK093638|BIN2|51411|bridging integrator 2##AB032698|BIN2|51411|bridging integrator 2##AK000783|BIN2|51411|bridging integrator 2##AK225911|BIN2|51411|bridging integrator 2##NM_016293|BIN2|51411|bridging integrator 2	0.811005	CTCF.p2:2:0.811
chr1	54414831	54414955	reg1010093.p1	9.720	+	TSC_hg19_v1_chr1_+_54412103 BC013101	-2768	+	TSC_hg19_v1_chr1_+_54412028 AK074521 AK075201 NM_052940 AK095767	-2850	+	TSC_hg19_v1_chr1_-_54411248 AK225916 AF100747 BC005245 NM_016126	-3627	-	BC140760 BC144466 BC171743 NM_001010978 BC103740 BC127708 BC127709	68935	-	CU678378 BC003106 TSC_hg19_v1_chr1_-_54518878 AF047439 AK075505 AX775909 BC016374 AK225624	103941	-	TSC_hg19_v1_chr1_-_54518888 BC095464	104001	-	BC013101|LRRC42|115353|leucine rich repeat containing 42##AK074521|LRRC42|115353|leucine rich repeat containing 42##AK075201|LRRC42|115353|leucine rich repeat containing 42##NM_052940|LRRC42|115353|leucine rich repeat containing 42##AK095767|LRRC42|115353|leucine rich repeat containing 42##AK225916|HSPB11|51668|heat shock protein family B (small), member 11##AF100747|HSPB11|51668|heat shock protein family B (small), member 11##BC005245|HSPB11|51668|heat shock protein family B (small), member 11##NM_016126|HSPB11|51668|heat shock protein family B (small), member 11##BC140760|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##BC144466|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##BC171743|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##NM_001010978|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##BC103740|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##BC127708|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##BC127709|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##BC003106|TMEM59|9528|transmembrane protein 59##AF047439|TMEM59|9528|transmembrane protein 59##AK075505|TMEM59|9528|transmembrane protein 59##AX775909|TMEM59|9528|transmembrane protein 59##BC016374|TMEM59|9528|transmembrane protein 59##AK225624|TMEM59|9528|transmembrane protein 59##BC095464|TMEM59|9528|transmembrane protein 59	0.996551	CTCF.p2:0:0.997
chr14	73639940	73640114	reg1012233.p1	9.719	+	AJ008005 TSC_hg19_v1_chr14_+_73603214	-36815	+	TSC_hg19_v1_chr14_+_73603184 L42110	-36847	+	TSC_hg19_v1_chr14_+_73603160 BC011729	-36867	+	NM_173462 TSC_hg19_v1_chr14_+_73704238 BC042057 BC136623 BC144315	64224	+	BX248775 TSC_hg19_v1_chr14_-_73925232 BX647137 AF171938 AF171939 AF171940 AF171941 BX248073 AF015040 AK315130 BC020788	285205	-	TSC_hg19_v1_chr14_-_73925274 BX248781	285240	-	AJ008005|PSEN1|5663|presenilin 1##L42110|PSEN1|5663|presenilin 1##BC011729|PSEN1|5663|presenilin 1##NM_173462|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BC042057|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BC136623|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BC144315|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BX248775|NUMB|8650|numb homolog (Drosophila)##BX647137|NUMB|8650|numb homolog (Drosophila)##AF171938|NUMB|8650|numb homolog (Drosophila)##AF171939|NUMB|8650|numb homolog (Drosophila)##AF171940|NUMB|8650|numb homolog (Drosophila)##AF171941|NUMB|8650|numb homolog (Drosophila)##BX248073|NUMB|8650|numb homolog (Drosophila)##AF015040|NUMB|8650|numb homolog (Drosophila)##AK315130|NUMB|8650|numb homolog (Drosophila)##BC020788|NUMB|8650|numb homolog (Drosophila)##BX248781|NUMB|8650|numb homolog (Drosophila)	0.944747	CTCF.p2:-3:0.945
chr19	14183014	14183146	reg1013367.p1	9.719	+	NM_001145028	-13110	-	TSC_hg19_v1_chr19_+_14142622 BC028003 DQ891051 DQ894230 CU688366	-40433	+	AF265242 AY358876 TSC_hg19_v1_chr19_+_14142572	-40495	+	TSC_hg19_v1_chr19_-_14201272 AY453840 NM_138352	18196	-	TSC_hg19_v1_chr19_-_14224999 AF208004 AF224718 NM_207518 AK292284 AF239744	41974	-	AB528630 X07767 TSC_hg19_v1_chr19_-_14228549 BC039846 BC108259 NM_002730	45380	-	NM_001145028|PALM3|342979|paralemmin 3##BC028003|IL27RA|9466|interleukin 27 receptor, alpha##DQ891051|IL27RA|9466|interleukin 27 receptor, alpha##DQ894230|IL27RA|9466|interleukin 27 receptor, alpha##AF265242|IL27RA|9466|interleukin 27 receptor, alpha##AY358876|IL27RA|9466|interleukin 27 receptor, alpha##AY453840|SAMD1|90378|sterile alpha motif domain containing 1##NM_138352|SAMD1|90378|sterile alpha motif domain containing 1##AF208004|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF224718|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##NM_207518|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AK292284|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF239744|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##X07767|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##BC039846|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##BC108259|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##NM_002730|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha	0.0	
chr19	32831307	32831425	reg1012892.p1	9.719	+	FJ211597 NM_001205273	-748180	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	-991019	-	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	-1967986	+	TSC_hg19_v1_chr19_+_32836524 NM_001136156 NM_014910 AK292526 AB029007 BX640881 BC136417 AL713775	5196	+	TSC_hg19_v1_chr19_-_32896476 BC000922	65126	-	TSC_hg19_v1_chr19_+_32896675 NM_001172774 AK129497 AF533711 BC029162	65247	+	FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##NM_001136156|ZNF507|22847|zinc finger protein 507##NM_014910|ZNF507|22847|zinc finger protein 507##AK292526|ZNF507|22847|zinc finger protein 507##AB029007|ZNF507|22847|zinc finger protein 507##BX640881|ZNF507|22847|zinc finger protein 507##BC136417|ZNF507|22847|zinc finger protein 507##AL713775|ZNF507|22847|zinc finger protein 507##BC000922|LOC400684|400684|uncharacterized LOC400684##NM_001172774|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AK129497|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AF533711|DPY19L3|147991|dpy-19-like 3 (C. elegans)##BC029162|DPY19L3|147991|dpy-19-like 3 (C. elegans)	0.982391	CTCF.p2:1:0.982
chr5	75937488	75937597	reg1011323.p2	9.719	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	-18397	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	-238426	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-558271	+	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	74414	+	NM_005242 BC018130 TSC_hg19_v1_chr5_+_76114854 U34038	177310	+	TSC_hg19_v1_chr5_+_76114883 BC012453 AY336105 BT009856 CU676194 CU680330 DQ890966 DQ894139	177402	+	BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor##NM_005242|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC018130|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##U34038|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC012453|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##AY336105|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BT009856|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ890966|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ894139|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1	0.490913	CTCF.p2:-3:0.491
chr7	151000625	151000770	reg1014552.p1	9.719	+	BX648385 TSC_hg19_v1_chr7_-_150974229 NM_003078 U66619	-26468	-	AY450431 BC002628 NM_001003802	-26878	-	TSC_hg19_v1_chr7_-_150946031 AY450430	-54656	-	TSC_hg19_v1_chr7_+_151038874 NM_001243351 NM_016118 AF300717	38145	+	TSC_hg19_v1_chr7_+_151038909 AF459743 AY129295 AK293159 AF155099	38217	+	AK056624 TSC_hg19_v1_chr7_-_151071775	71039	-	BX648385|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_003078|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##U66619|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##AY450431|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##BC002628|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_001003802|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##AY450430|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_001243351|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_016118|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF300717|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF459743|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AY129295|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AK293159|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF155099|NUB1|51667|negative regulator of ubiquitin-like proteins 1	0.998928	CTCF.p2:10:0.999
chrX	129673806	129673906	reg1010886.p1	9.719	+	TSC_hg19_v1_chrX_+_129535955 BC003676 NM_016024 AK292855 BC105582 BC012345 AL050405 BC033750 BC063517 BC010036 BC040433 BC050707	-137903	+	AY288416 BC101166 BC101167 BC101168 AB529244 HQ258187 BC095502 BC126179 BC126181 NM_178471	-154391	-	TSC_hg19_v1_chrX_+_129473927 AK304649 AK297499 AK309433 AK296155 NM_003951 NM_022810 BC119666 BC119667 AF155809 AF155810 AF155811 AY358099	-199824	+	TSC_hg19_v1_chrX_-_130037184 BC108713 AL133207 AK289812 AK289837	363321	-	TSC_hg19_v1_chrX_-_130037207 AK000353 NM_006375 NM_182314	363350	-	AK128203 NM_144967 AK296748 AX721074	518416	+	BC003676|RBMX2|51634|RNA binding motif protein, X-linked 2##NM_016024|RBMX2|51634|RNA binding motif protein, X-linked 2##AK292855|RBMX2|51634|RNA binding motif protein, X-linked 2##BC105582|RBMX2|51634|RNA binding motif protein, X-linked 2##BC012345|RBMX2|51634|RNA binding motif protein, X-linked 2##AL050405|RBMX2|51634|RNA binding motif protein, X-linked 2##BC033750|RBMX2|51634|RNA binding motif protein, X-linked 2##BC063517|RBMX2|51634|RNA binding motif protein, X-linked 2##BC010036|RBMX2|51634|RNA binding motif protein, X-linked 2##BC040433|RBMX2|51634|RNA binding motif protein, X-linked 2##BC050707|RBMX2|51634|RNA binding motif protein, X-linked 2##AY288416|GPR119|139760|G protein-coupled receptor 119##BC101166|GPR119|139760|G protein-coupled receptor 119##BC101167|GPR119|139760|G protein-coupled receptor 119##BC101168|GPR119|139760|G protein-coupled receptor 119##HQ258187|GPR119|139760|G protein-coupled receptor 119##BC095502|GPR119|139760|G protein-coupled receptor 119##BC126179|GPR119|139760|G protein-coupled receptor 119##BC126181|GPR119|139760|G protein-coupled receptor 119##NM_178471|GPR119|139760|G protein-coupled receptor 119##AK297499|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AK309433|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AK296155|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##NM_003951|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##NM_022810|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##BC119666|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##BC119667|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155809|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155810|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155811|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AY358099|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##BC108713|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AL133207|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289812|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289837|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK000353|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_006375|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_182314|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK128203|ARHGAP36|158763|Rho GTPase activating protein 36##NM_144967|ARHGAP36|158763|Rho GTPase activating protein 36##AK296748|ARHGAP36|158763|Rho GTPase activating protein 36	0.51872	CTCF.p2:12:0.519
chr16	30953338	30953493	reg1014603.p1	9.718	+	TSC_hg19_v1_chr16_+_30937206 BC059173	-16206	+	AK302669 NM_001099784	-17520	+	TSC_hg19_v1_chr16_-_30934469 BC101464 BC101988 BC105687 BC105926 AK092263 AX747439	-18902	-	TSC_hg19_v1_chr16_+_30960389 NM_152288	6977	+	TSC_hg19_v1_chr16_+_30960425 BC015555	7006	+	TSC_hg19_v1_chr16_+_30960437 AK298276 BC006126 BC016150 BC022786	7032	+	BC059173|FBXL19|54620|F-box and leucine-rich repeat protein 19##AK302669|FBXL19|54620|F-box and leucine-rich repeat protein 19##NM_001099784|FBXL19|54620|F-box and leucine-rich repeat protein 19##BC101464|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC101988|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC105687|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC105926|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##AK092263|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##NM_152288|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC015555|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##AK298276|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC006126|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC016150|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC022786|ORAI3|93129|ORAI calcium release-activated calcium modulator 3	0.0	
chr20	21510607	21510729	reg1012678.p2	9.718	+	NM_002509	-16005	-	NM_033176 TSC_hg19_v1_chr20_-_21378181	-132554	-	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	-226693	+	TSC_hg19_v1_chr20_+_21686296 NM_006192	175626	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	175865	+	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	1054248	-	NM_002509|NKX2-2|4821|NK2 homeobox 2##NM_033176|NKX2-4|644524|NK2 homeobox 4##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2##NM_006192|PAX1|5075|paired box 1##BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2	0.947152	CTCF.p2:-3:0.947
chr3	8705307	8705404	reg1011503.p1	9.718	+	TSC_hg19_v1_chr3_-_8693765 AB024705 NM_015931 BC052614	-11601	-	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	-161774	+	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	-161840	+	AK291892 NM_001234 NM_033337 BC069368 AF036365 BC102033 BC102036 BC102037 Y14747 CU686780 AF043101	70170	+	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	105731	-	TSC_hg19_v1_chr3_-_8811300 NM_000916	105929	-	AB024705|C3orf32|51066|chromosome 3 open reading frame 32##NM_015931|C3orf32|51066|chromosome 3 open reading frame 32##BC052614|C3orf32|51066|chromosome 3 open reading frame 32##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK291892|CAV3|859|caveolin 3##NM_001234|CAV3|859|caveolin 3##NM_033337|CAV3|859|caveolin 3##BC069368|CAV3|859|caveolin 3##AF036365|CAV3|859|caveolin 3##BC102033|CAV3|859|caveolin 3##BC102036|CAV3|859|caveolin 3##BC102037|CAV3|859|caveolin 3##Y14747|CAV3|859|caveolin 3##AF043101|CAV3|859|caveolin 3##X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor##NM_000916|OXTR|5021|oxytocin receptor	0.998685	CTCF.p2:-14:0.999
chr7	130581864	130581961	reg1009477.p1	9.718	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-162985	-	AF294347 AF431815 BC038415 NM_052933	-210557	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-228317	-	TSC_hg19_v1_chr7_-_130792857 BC047367	210947	-	AK294384 NM_001145354	212942	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	430694	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.996825	CTCF.p2:-14:0.997
chr17	38518938	38519069	reg1013030.p1	9.717	+	NM_001024809	-20733	+	TSC_hg19_v1_chr17_+_38474548 AK130192	-44456	+	TSC_hg19_v1_chr17_+_38474521 AK292205 FJ487576	-44479	+	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	1943	-	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	55121	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	80816	+	NM_001024809|RARA|5914|retinoic acid receptor, alpha##AK130192|RARA|5914|retinoic acid receptor, alpha##AK292205|RARA|5914|retinoic acid receptor, alpha##FJ487576|RARA|5914|retinoic acid receptor, alpha##AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4	0.466262	CTCF.p2:5:0.466
chr19	2613916	2614036	reg1012237.p2	9.717	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-137738	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-157016	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-157040	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	88719	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	88766	-	AK124445 TSC_hg19_v1_chr19_-_2717420	103373	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.019149	
chr21	40760625	40760748	reg1012037.p2	9.717	+	TSC_hg19_v1_chr21_+_40759717 AK310268 NM_001146218 BC111393 AK299144	-969	+	TSC_hg19_v1_chr21_+_40752270 Y12478 AK293866 BC012415	-8413	+	TSC_hg19_v1_chr21_+_40752257 AK299245 AK297186 AK293113	-8437	+	BC031059 NM_152505	55441	-	BC043006 BC026122 TSC_hg19_v1_chr21_-_40817675	56984	-	TSC_hg19_v1_chr21_+_40817797 NM_001001713	57109	+	AK310268|WRB|7485|tryptophan rich basic protein##NM_001146218|WRB|7485|tryptophan rich basic protein##BC111393|WRB|7485|tryptophan rich basic protein##AK299144|WRB|7485|tryptophan rich basic protein##Y12478|WRB|7485|tryptophan rich basic protein##AK293866|WRB|7485|tryptophan rich basic protein##BC012415|WRB|7485|tryptophan rich basic protein##AK299245|WRB|7485|tryptophan rich basic protein##AK297186|WRB|7485|tryptophan rich basic protein##AK293113|WRB|7485|tryptophan rich basic protein##BC031059|LCA5L|150082|Leber congenital amaurosis 5-like##NM_152505|LCA5L|150082|Leber congenital amaurosis 5-like##BC043006|LCA5L|150082|Leber congenital amaurosis 5-like##BC026122|LCA5L|150082|Leber congenital amaurosis 5-like##NM_001001713|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein	0.997471	CTCF.p2:-7:0.997
chr12	102333683	102333834	reg1012051.p2	9.716	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	-62300	+	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	-62640	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	-109172	-	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	121992	-	TSC_hg19_v1_chr12_-_102455791 BC010889	122019	-	TSC_hg19_v1_chr12_-_102455912 AK314970 AK223339 AF151874 AF155655 NM_016053	122103	-	AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##CR457171|CCDC53|51019|coiled-coil domain containing 53##BC010889|CCDC53|51019|coiled-coil domain containing 53##AK314970|CCDC53|51019|coiled-coil domain containing 53##AK223339|CCDC53|51019|coiled-coil domain containing 53##AF151874|CCDC53|51019|coiled-coil domain containing 53##AF155655|CCDC53|51019|coiled-coil domain containing 53##NM_016053|CCDC53|51019|coiled-coil domain containing 53	0.933638	CTCF.p2:-24:0.934
chr5	146843910	146844029	reg1012453.p2	9.715	+	CU691634 AB384367 EU832180 EU832273 TSC_hg19_v1_chr5_-_146833229 BC039006 D78014 AK297223 NM_001387 Y07818	-10704	-	AK094580 NM_001112724 NM_145001 TSC_hg19_v1_chr5_+_146614587 AK315942 BC021666 AK299099	-229363	+	AK294659 NM_181677 NM_181678 AK295347	-382947	-	EU007906 CU687310 EU832163 EU832257 TSC_hg19_v1_chr5_-_146889506	45497	-	BC077077 NM_001197294 TSC_hg19_v1_chr5_-_146889632	45657	-	BC003189 AB011127 TSC_hg19_v1_chr5_-_147162128 AK291280	318125	-	EU832180|DPYSL3|1809|dihydropyrimidinase-like 3##EU832273|DPYSL3|1809|dihydropyrimidinase-like 3##BC039006|DPYSL3|1809|dihydropyrimidinase-like 3##D78014|DPYSL3|1809|dihydropyrimidinase-like 3##AK297223|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3##Y07818|DPYSL3|1809|dihydropyrimidinase-like 3##AK094580|STK32A|202374|serine/threonine kinase 32A##NM_001112724|STK32A|202374|serine/threonine kinase 32A##NM_145001|STK32A|202374|serine/threonine kinase 32A##AK315942|STK32A|202374|serine/threonine kinase 32A##BC021666|STK32A|202374|serine/threonine kinase 32A##AK299099|STK32A|202374|serine/threonine kinase 32A##AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##EU007906|DPYSL3|1809|dihydropyrimidinase-like 3##EU832163|DPYSL3|1809|dihydropyrimidinase-like 3##EU832257|DPYSL3|1809|dihydropyrimidinase-like 3##BC077077|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3##BC003189|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AB011127|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AK291280|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	0.980386	CTCF.p2:-2:0.980
chr4	119811378	119811510	reg1014650.p1	9.714	+	TSC_hg19_v1_chr4_+_119810008 AL833547 NM_001128933 NM_001128934 NM_133477 BC150629 AK307711 CR936673 AK304121 AL832031 AL833294 AL832363 BC136256 AM392848 AM393854 EU481975	-1360	+	TSC_hg19_v1_chr4_-_119757290 NM_014822	-54103	-	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	-54217	-	BX647849 TSC_hg19_v1_chr4_+_119947854	136391	+	FN422000 TSC_hg19_v1_chr4_+_119948273	136829	+	AJ010482 TSC_hg19_v1_chr4_+_119948327	136880	+	AL833547|SYNPO2|171024|synaptopodin 2##NM_001128933|SYNPO2|171024|synaptopodin 2##NM_001128934|SYNPO2|171024|synaptopodin 2##NM_133477|SYNPO2|171024|synaptopodin 2##BC150629|SYNPO2|171024|synaptopodin 2##AK307711|SYNPO2|171024|synaptopodin 2##CR936673|SYNPO2|171024|synaptopodin 2##AK304121|SYNPO2|171024|synaptopodin 2##AL832031|SYNPO2|171024|synaptopodin 2##AL833294|SYNPO2|171024|synaptopodin 2##AL832363|SYNPO2|171024|synaptopodin 2##BC136256|SYNPO2|171024|synaptopodin 2##AM392848|SYNPO2|171024|synaptopodin 2##AM393854|SYNPO2|171024|synaptopodin 2##EU481975|SYNPO2|171024|synaptopodin 2##NM_014822|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BX647849|SYNPO2|171024|synaptopodin 2##FN422000|SYNPO2|171024|synaptopodin 2##AJ010482|SYNPO2|171024|synaptopodin 2	0.93005	CTCF.p2:-9:0.930
chr2	121437961	121438066	reg1011335.p1	9.713	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-334216	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-427509	+	AK127675 AK304588 TSC_hg19_v1_chr2_+_121010450 M35416	-427569	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	116880	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	604760	-	TSC_hg19_v1_chr2_-_122159142 CR749627	721142	-	BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK127675|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK304588|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##M35416|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1	0.999815	CTCF.p2:24:1.000
chr7	24441753	24441865	reg1011364.p1	9.713	+	BC029497 NM_000905 AK312156 K01911 M15789	-117966	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-691893	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	-721986	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	171279	+	TSC_hg19_v1_chr7_-_24797042 BC099911	355228	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	355258	-	BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5	0.046693	
chr9	76180900	76181017	reg1012697.p2	9.713	+	TSC_hg19_v1_chr9_+_75766797 BC001275	-414155	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	-414180	+	NM_000689	-612726	-	NM_006914 BC051830 Y08639	931316	+	AY333284 NM_001177311	1321304	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	1321776	-	BC001275|ANXA1|301|annexin A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B##AY333284|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177311|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	0.176837	
chr9	99871644	99871736	reg1007979.p2	9.713	+	AK312806 NM_001201575	-69766	-	AF070448 BC023504 Y14734 AB001928 AK310645 AK310740 BC110512 AY358641 NM_001333	-70212	-	TSC_hg19_v1_chr9_-_99775872 BC005058	-95790	-	NM_020893 CR749320	198248	+	TSC_hg19_v1_chr9_+_100174364 NM_014290 BC028694	302583	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	302689	+	AK312806|CTSL2|1515|cathepsin L2##NM_001201575|CTSL2|1515|cathepsin L2##AF070448|CTSL2|1515|cathepsin L2##BC023504|CTSL2|1515|cathepsin L2##Y14734|CTSL2|1515|cathepsin L2##AB001928|CTSL2|1515|cathepsin L2##AK310645|CTSL2|1515|cathepsin L2##AK310740|CTSL2|1515|cathepsin L2##BC110512|CTSL2|1515|cathepsin L2##AY358641|CTSL2|1515|cathepsin L2##NM_001333|CTSL2|1515|cathepsin L2##BC005058|HIATL2|84278|hippocampus abundant transcript-like 2##NM_020893|C9orf174|100499483|chromosome 9 open reading frame 174##CR749320|C9orf174|100499483|chromosome 9 open reading frame 174##NM_014290|TDRD7|23424|tudor domain containing 7##BC028694|TDRD7|23424|tudor domain containing 7##AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7	0.431826	CTCF.p2:-5:0.432
chr12	64712557	64712708	reg1015408.p1	9.712	+	BC071634 AK057111 BC036246 AK129933 NM_152440	-96579	-	TSC_hg19_v1_chr12_+_64238511 BC053903 NM_020762 BC029919	-474086	+	TSC_hg19_v1_chr12_+_64237847 BC065032	-474906	+	BC039369 NM_001099676 NM_001170633	71685	-	TSC_hg19_v1_chr12_+_64798240 NM_007235 AK308108 AK292884	85614	+	BC020569 Y16414 TSC_hg19_v1_chr12_+_64803772 AF039022	91146	+	BC071634|C12orf66|144577|chromosome 12 open reading frame 66##AK057111|C12orf66|144577|chromosome 12 open reading frame 66##BC036246|C12orf66|144577|chromosome 12 open reading frame 66##AK129933|C12orf66|144577|chromosome 12 open reading frame 66##NM_152440|C12orf66|144577|chromosome 12 open reading frame 66##BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC039369|C12orf56|115749|chromosome 12 open reading frame 56##NM_001099676|C12orf56|115749|chromosome 12 open reading frame 56##NM_001170633|C12orf56|115749|chromosome 12 open reading frame 56##NM_007235|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK308108|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK292884|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	0.032977	
chr1	52093471	52093612	reg1012263.p2	9.712	+	TSC_hg19_v1_chr1_+_52082763 AK056617 AK091703 AK027535 AF392445 AY178997	-10774	+	NM_024586 NM_148906 NM_148908 NM_148909	-10996	+	NM_001981 Z29064 TSC_hg19_v1_chr1_-_51985031	-108517	-	TSC_hg19_v1_chr1_+_52195487 NM_148904 NM_148905 NM_148907 AK315167	101936	+	TSC_hg19_v1_chr1_+_52195549 AK027707 BC025978	102005	+	TSC_hg19_v1_chr1_+_52195604 AK022554	102113	+	AK056617|OSBPL9|114883|oxysterol binding protein-like 9##AK091703|OSBPL9|114883|oxysterol binding protein-like 9##AK027535|OSBPL9|114883|oxysterol binding protein-like 9##AF392445|OSBPL9|114883|oxysterol binding protein-like 9##AY178997|OSBPL9|114883|oxysterol binding protein-like 9##NM_024586|OSBPL9|114883|oxysterol binding protein-like 9##NM_148906|OSBPL9|114883|oxysterol binding protein-like 9##NM_148908|OSBPL9|114883|oxysterol binding protein-like 9##NM_148909|OSBPL9|114883|oxysterol binding protein-like 9##NM_001981|EPS15|2060|epidermal growth factor receptor pathway substrate 15##Z29064|EPS15|2060|epidermal growth factor receptor pathway substrate 15##NM_148904|OSBPL9|114883|oxysterol binding protein-like 9##NM_148905|OSBPL9|114883|oxysterol binding protein-like 9##NM_148907|OSBPL9|114883|oxysterol binding protein-like 9##AK315167|OSBPL9|114883|oxysterol binding protein-like 9##AK027707|OSBPL9|114883|oxysterol binding protein-like 9##BC025978|OSBPL9|114883|oxysterol binding protein-like 9##AK022554|OSBPL9|114883|oxysterol binding protein-like 9	0.05926	
chr16	11349659	11349798	reg1011294.p6	9.712	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-311285	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-313493	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-313562	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	322	-	X63758 BC096135 BC096136 BC096137 NM_005425	13410	-	NM_021247	17723	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.787166	CTCF.p2:-22:0.787
chr2	183105624	183105752	reg1011657.p1	9.712	+	NM_001080545 AK129898 AF494535 BX647581 BC017943	-255039	+	TSC_hg19_v1_chr2_+_182756689 BC052581 BC064499 BC028706 AK291745 BX647257 AB116937 AB385517 BX647967 AK304238 BX648888	-348895	+	TSC_hg19_v1_chr2_+_182756494 NM_001130445 NM_006751 AK093143 AX747951 AB067514	-349157	+	AK295657 AB384753 DQ892369 DQ893372 DQ895578 DQ896694 AF110237 NM_005019 BC022480 AF110240 AF110236 NM_001003683 U40370 AK294239	281596	-	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	475386	+	TSC_hg19_v1_chr2_+_183582683 BC107425 AF314529 AY089971 HQ258514 HQ258651 AL832646 AK027450	477059	+	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC052581|SSFA2|6744|sperm specific antigen 2##BC064499|SSFA2|6744|sperm specific antigen 2##BC028706|SSFA2|6744|sperm specific antigen 2##AK291745|SSFA2|6744|sperm specific antigen 2##BX647257|SSFA2|6744|sperm specific antigen 2##AB116937|SSFA2|6744|sperm specific antigen 2##BX647967|SSFA2|6744|sperm specific antigen 2##AK304238|SSFA2|6744|sperm specific antigen 2##BX648888|SSFA2|6744|sperm specific antigen 2##NM_001130445|SSFA2|6744|sperm specific antigen 2##NM_006751|SSFA2|6744|sperm specific antigen 2##AB067514|SSFA2|6744|sperm specific antigen 2##AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC107425|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF314529|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY089971|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258514|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258651|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832646|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027450|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	0.212893	CTCF.p2:0:0.213
chr10	63656829	63656971	reg1011637.p1	9.711	+	BC041932 NM_173554	-234182	+	CR749606 NM_178505	-443693	-	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	-443941	-	NM_032199	4112	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	4531	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	152196	+	BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##CR749606|TMEM26|219623|transmembrane protein 26##NM_178505|TMEM26|219623|transmembrane protein 26##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	0.113778	
chr11	118166698	118166814	reg1012290.p1	9.711	+	TSC_hg19_v1_chr11_-_118135197 NM_005797 NM_144765	-31533	-	AF030455 AY359061 TSC_hg19_v1_chr11_-_118135010 AF304447 AF275945 BC017774	-31737	-	TSC_hg19_v1_chr11_-_118134957 AK290326	-31790	-	NM_000733 AK301255 AK311641 AK292612 BC033578 BC049847 X03884 CU690624	8724	+	JN392069 BC039035 AK311971 TSC_hg19_v1_chr11_-_118213368 BC070321 NM_000732 NM_001040651	46633	-	AK299997 NM_000073 AK313966 AK315895 AK310622 BC069685 X04145 X60492 AK223314 AK310578 BC113830	48328	+	NM_005797|MPZL2|10205|myelin protein zero-like 2##NM_144765|MPZL2|10205|myelin protein zero-like 2##AF030455|MPZL2|10205|myelin protein zero-like 2##AY359061|MPZL2|10205|myelin protein zero-like 2##AF304447|MPZL2|10205|myelin protein zero-like 2##AF275945|MPZL2|10205|myelin protein zero-like 2##BC017774|MPZL2|10205|myelin protein zero-like 2##AK290326|MPZL2|10205|myelin protein zero-like 2##NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##BC039035|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##AK311971|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##BC070321|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##NM_000732|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##NM_001040651|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	0.122322	
chr7	20351155	20351308	reg1012690.p2	9.709	+	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	-94251	-	BX648384 NM_152774	-538828	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	-602585	-	AK295044 TSC_hg19_v1_chr7_+_20370337	19106	+	BC002630 NM_002214 M73780	19503	+	AB353947 NM_001163941 AY230001	304066	+	BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##AK295044|ITGB8|3696|integrin, beta 8##BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8##AB353947|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163941|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY230001|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	0.063527	
chr13	53144201	53144306	reg1012517.p1	9.708	+	TSC_hg19_v1_chr13_+_53035247 AL136848	-108960	+	EF560732 TSC_hg19_v1_chr13_+_53029614 BC105806 BC066920 BC130296 BC136332 EU832808 GQ129239 HQ258356	-114601	+	NM_001098525 NM_018204 TSC_hg19_v1_chr13_+_53029573 AY062261 AY062262 AK022982 Y15758	-114700	+	TSC_hg19_v1_chr13_+_53191659 NM_001011724 NM_001011725 BC007108 AK123159 BC082242	47384	+	TSC_hg19_v1_chr13_+_53216565 BC108266	72312	+	NM_001130912 NM_006704 TSC_hg19_v1_chr13_+_53227044 AJ344097 AK292128 AY321358 AK302363 AY271314 BC000911 AK291402 AB528309 AF132856 BT009798 DQ890945 DQ894108	82689	+	AL136848|CKAP2|26586|cytoskeleton associated protein 2##EF560732|CKAP2|26586|cytoskeleton associated protein 2##BC105806|CKAP2|26586|cytoskeleton associated protein 2##BC066920|CKAP2|26586|cytoskeleton associated protein 2##BC130296|CKAP2|26586|cytoskeleton associated protein 2##BC136332|CKAP2|26586|cytoskeleton associated protein 2##EU832808|CKAP2|26586|cytoskeleton associated protein 2##GQ129239|CKAP2|26586|cytoskeleton associated protein 2##HQ258356|CKAP2|26586|cytoskeleton associated protein 2##NM_001098525|CKAP2|26586|cytoskeleton associated protein 2##NM_018204|CKAP2|26586|cytoskeleton associated protein 2##AY062261|CKAP2|26586|cytoskeleton associated protein 2##AY062262|CKAP2|26586|cytoskeleton associated protein 2##AK022982|CKAP2|26586|cytoskeleton associated protein 2##Y15758|CKAP2|26586|cytoskeleton associated protein 2##NM_001011724|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001011725|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##AK123159|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##BC082242|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001130912|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##NM_006704|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AJ344097|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK292128|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY321358|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK302363|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY271314|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC000911|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK291402|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF132856|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BT009798|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ890945|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ894108|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	0.992617	CTCF.p2:-22:0.993
chr3	173271594	173271714	reg1011915.p2	9.708	+	BC032555 NM_014932	-155411	+	BC034496 AF345909 AF404758 AK093041 AX747878 NM_031955	-412646	-	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	-799352	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	887066	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	1305436	+	TSC_hg19_v1_chr3_-_176914267 BX648935	3642596	-	BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BC034496|SPATA16|83893|spermatogenesis associated 16##AF345909|SPATA16|83893|spermatogenesis associated 16##AF404758|SPATA16|83893|spermatogenesis associated 16##AK093041|SPATA16|83893|spermatogenesis associated 16##NM_031955|SPATA16|83893|spermatogenesis associated 16##BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.952244	CTCF.p2:-3:0.952
chr1	230303227	230303367	reg1013842.p1	9.707	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-100301	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-100355	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-541283	+	BC150638 NM_024554	210093	-	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	474899	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	474936	+	AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2	0.914713	CTCF.p2:10:0.915
chr14	100659526	100659672	reg1005373.p2	9.707	+	AY541700 BC063598 TSC_hg19_v1_chr14_-_100626009 NM_206918	-33628	-	AF131766 TSC_hg19_v1_chr14_+_100563847	-95766	+	TSC_hg19_v1_chr14_+_100531768 AF087843 BC032358 AF052504	-127804	+	NM_003403 TSC_hg19_v1_chr14_+_100705177	45543	+	TSC_hg19_v1_chr14_+_100705309 M77698	45713	+	TSC_hg19_v1_chr14_+_100705474 BC037308 M76541 BC020324 BC065366 AB464361 DQ891638 EU176600 CU691478	45907	+	AY541700|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##BC063598|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##NM_206918|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##AF131766|EVL|51466|Enah/Vasp-like##AF087843|EVL|51466|Enah/Vasp-like##BC032358|EVL|51466|Enah/Vasp-like##AF052504|EVL|51466|Enah/Vasp-like##NM_003403|YY1|7528|YY1 transcription factor##M77698|YY1|7528|YY1 transcription factor##BC037308|YY1|7528|YY1 transcription factor##M76541|YY1|7528|YY1 transcription factor##BC020324|YY1|7528|YY1 transcription factor##BC065366|YY1|7528|YY1 transcription factor##DQ891638|YY1|7528|YY1 transcription factor##EU176600|YY1|7528|YY1 transcription factor	0.182404	
chr14	105234984	105235063	reg1010207.p1	9.707	+	TSC_hg19_v1_chr14_+_105219517 AK300415 CU689916 AK128704 AK316457	-15491	+	TSC_hg19_v1_chr14_+_105219483 NM_006427 NM_021709 AK223332 AK316550 BC034562	-15535	+	BC032039 NM_199165 AK096720	-38796	+	BX648205 NM_005163	24914	-	BC063408 TSC_hg19_v1_chr14_-_105261895	26849	-	BC000479 TSC_hg19_v1_chr14_-_105262071 BC084538	27022	-	AK300415|SIVA1|10572|SIVA1, apoptosis-inducing factor##NM_006427|SIVA1|10572|SIVA1, apoptosis-inducing factor##NM_021709|SIVA1|10572|SIVA1, apoptosis-inducing factor##AK223332|SIVA1|10572|SIVA1, apoptosis-inducing factor##AK316550|SIVA1|10572|SIVA1, apoptosis-inducing factor##BC034562|SIVA1|10572|SIVA1, apoptosis-inducing factor##BC032039|ADSSL1|122622|adenylosuccinate synthase like 1##NM_199165|ADSSL1|122622|adenylosuccinate synthase like 1##AK096720|ADSSL1|122622|adenylosuccinate synthase like 1##BX648205|AKT1|207|v-akt murine thymoma viral oncogene homolog 1##NM_005163|AKT1|207|v-akt murine thymoma viral oncogene homolog 1##BC063408|AKT1|207|v-akt murine thymoma viral oncogene homolog 1##BC000479|AKT1|207|v-akt murine thymoma viral oncogene homolog 1##BC084538|AKT1|207|v-akt murine thymoma viral oncogene homolog 1	1.166358	CTCF.p2:5:1.000
chr20	22314934	22315060	reg1013261.p1	9.706	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	-628464	+	TSC_hg19_v1_chr20_+_21686296 NM_006192	-628703	+	NM_002509	-820334	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	249919	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	250078	-	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	251105	-	BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1##NM_006192|PAX1|5075|paired box 1##NM_002509|NKX2-2|4821|NK2 homeobox 2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2	0.10994	
chr2	43769529	43769692	reg1012376.p1	9.706	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-315868	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-315880	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-316265	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	53538	-	TSC_hg19_v1_chr2_+_43864411 BC063310	94803	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	94829	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.573454	CTCF.p2:-1:0.573
chr10	126434278	126434428	reg1015030.p1	9.705	+	TSC_hg19_v1_chr10_-_126432908 NM_014661	-1442	-	TSC_hg19_v1_chr10_-_126432823 BC031654	-1537	-	D50930 TSC_hg19_v1_chr10_-_126432660	-1709	-	TSC_hg19_v1_chr10_-_126480455 CU693146 AL832292 AF318345 BC026167 NM_212554	46051	-	NM_032182 TSC_hg19_v1_chr10_+_126490387 AK296677 D63877 BC008999	56019	+	NM_017580	196338	+	NM_014661|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##D50930|FAM53B|9679|family with sequence similarity 53, member B##AL832292|METTL10|399818|methyltransferase like 10##AF318345|METTL10|399818|methyltransferase like 10##BC026167|METTL10|399818|methyltransferase like 10##NM_212554|METTL10|399818|methyltransferase like 10##NM_032182|FAM175B|23172|family with sequence similarity 175, member B##AK296677|FAM175B|23172|family with sequence similarity 175, member B##D63877|FAM175B|23172|family with sequence similarity 175, member B##BC008999|FAM175B|23172|family with sequence similarity 175, member B##NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1	0.633409	CTCF.p2:25:0.633
chr15	22387600	22387723	reg1012456.p2	9.705	+	BC136597 BC136598 NM_001005241 DQ786223	-5216	+	BC136985 NM_001004719	-19184	+	NM_207355 BC066981	-304523	-	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	85561	-	AK097517 NM_001001413	348584	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	445809	+	BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5	0.076144	
chr5	447053	447176	reg1007931.p1	9.705	+	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	-3764	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	-3884	-	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-142824	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	25998	-	BC101669 BC101671 BC143328 U28043 BC011555 NM_004174 TSC_hg19_v1_chr5_-_524565	77391	-	NM_018140 TSC_hg19_v1_chr5_+_612451	165314	+	AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845##BC101669|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC101671|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC143328|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##U28043|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC011555|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##NM_004174|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##NM_018140|CEP72|55722|centrosomal protein 72kDa	0.646902	CTCF.p2:-22:0.647
chrX	119514707	119514838	reg1014178.p1	9.705	+	AK309999 NM_001142447 NM_012069 AF158383 AF158384 BC117227 BC143404 BC143406 BC143407 HQ258396	-18792	+	TSC_hg19_v1_chrX_-_119445320 AF450484 AK056403 NM_001104544 NM_001104545 NM_017938	-69419	-	TSC_hg19_v1_chrX_-_119445289 AK289684 BC047054	-69487	-	AK304405 TSC_hg19_v1_chrX_-_119602986	88152	-	TSC_hg19_v1_chrX_-_119603051 AY561849 AB528277 CU678318 DQ892095 DQ895288	88261	-	TSC_hg19_v1_chrX_-_119603122 J04183	88328	-	AK309999|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##NM_001142447|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##NM_012069|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF158383|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF158384|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC117227|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143404|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143406|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143407|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##HQ258396|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF450484|FAM70A|55026|family with sequence similarity 70, member A##AK056403|FAM70A|55026|family with sequence similarity 70, member A##NM_001104544|FAM70A|55026|family with sequence similarity 70, member A##NM_001104545|FAM70A|55026|family with sequence similarity 70, member A##NM_017938|FAM70A|55026|family with sequence similarity 70, member A##AK289684|FAM70A|55026|family with sequence similarity 70, member A##BC047054|FAM70A|55026|family with sequence similarity 70, member A##AK304405|LAMP2|3920|lysosomal-associated membrane protein 2##AY561849|LAMP2|3920|lysosomal-associated membrane protein 2##DQ892095|LAMP2|3920|lysosomal-associated membrane protein 2##DQ895288|LAMP2|3920|lysosomal-associated membrane protein 2##J04183|LAMP2|3920|lysosomal-associated membrane protein 2	0.917158	CTCF.p2:4:0.917
chr1	108757448	108757585	reg1013765.p1	9.704	+	TSC_hg19_v1_chr1_+_108742987 AK130480	-14507	+	TSC_hg19_v1_chr1_-_108742975 AK304165 NM_013386	-14531	-	TSC_hg19_v1_chr1_-_108742938 AK316304	-14591	-	BC125161 BC125162 AK057395 AK316438 AK302318 NM_001143989	29166	-	NM_001143987 NM_001143988 BC125161 BC125162	235406	+	BC127898 BC150530 NM_001010883 BC140863 BC140865	345526	+	AK304165|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_013386|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK316304|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4##NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4##NM_001143987|NBPF6|653149|neuroblastoma breakpoint family, member 6##NM_001143988|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##BC127898|FAM102B|284611|family with sequence similarity 102, member B##BC150530|FAM102B|284611|family with sequence similarity 102, member B##NM_001010883|FAM102B|284611|family with sequence similarity 102, member B##BC140863|FAM102B|284611|family with sequence similarity 102, member B##BC140865|FAM102B|284611|family with sequence similarity 102, member B	0.187641	
chr1	23290809	23290940	reg1011125.p1	9.704	+	TSC_hg19_v1_chr1_+_23037331 NM_004442 NM_017449 AK299701 BC067861 AB210018 AF025304 CU686595 L36643	-253451	+	NM_000491 TSC_hg19_v1_chr1_+_22979728 BC008983	-311151	+	NM_001114101 NM_172369 AK057792 TSC_hg19_v1_chr1_+_22970125 AF087892 AK226152 BC009016 AK130613	-320687	+	NM_001242521	51468	-	TSC_hg19_v1_chr1_+_23345960 NM_001009999 NM_015013	55081	+	TSC_hg19_v1_chr1_+_23345985 AB011173 BC040194 AK290328 BC048134	55174	+	NM_004442|EPHB2|2048|EPH receptor B2##NM_017449|EPHB2|2048|EPH receptor B2##AK299701|EPHB2|2048|EPH receptor B2##BC067861|EPHB2|2048|EPH receptor B2##AB210018|EPHB2|2048|EPH receptor B2##AF025304|EPHB2|2048|EPH receptor B2##L36643|EPHB2|2048|EPH receptor B2##NM_000491|C1QB|713|complement component 1, q subcomponent, B chain##BC008983|C1QB|713|complement component 1, q subcomponent, B chain##NM_001114101|C1QC|714|complement component 1, q subcomponent, C chain##NM_172369|C1QC|714|complement component 1, q subcomponent, C chain##AK057792|C1QC|714|complement component 1, q subcomponent, C chain##AF087892|C1QC|714|complement component 1, q subcomponent, C chain##AK226152|C1QC|714|complement component 1, q subcomponent, C chain##BC009016|C1QC|714|complement component 1, q subcomponent, C chain##AK130613|C1QC|714|complement component 1, q subcomponent, C chain##NM_001242521|LOC729059|729059|uncharacterized LOC729059##NM_001009999|KDM1A|23028|lysine (K)-specific demethylase 1A##NM_015013|KDM1A|23028|lysine (K)-specific demethylase 1A##AB011173|KDM1A|23028|lysine (K)-specific demethylase 1A##BC040194|KDM1A|23028|lysine (K)-specific demethylase 1A##AK290328|KDM1A|23028|lysine (K)-specific demethylase 1A##BC048134|KDM1A|23028|lysine (K)-specific demethylase 1A	0.99873	CTCF.p2:0:0.999
chr14	96180421	96180561	reg1014273.p1	9.704	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-24	-	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	-27713	+	TSC_hg19_v1_chr14_+_96001402 DQ083331	-179058	+	AK023027 TSC_hg19_v1_chr14_+_96342762	162254	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	325155	+	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	490586	+	CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##DQ083331|GLRX5|51218|glutaredoxin 5##AK023027|LOC100507043|100507043|uncharacterized LOC100507043##NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2	0.48089	CTCF.p2:23:0.481
chr17	60143425	60143545	reg1012285.p2	9.704	+	TSC_hg19_v1_chr17_-_60142600 BC140891 AF117754 NM_005121	-858	-	TSC_hg19_v1_chr17_-_60005339 AB033113 AK308307 AK299032 AL136800 NM_020748	-138143	-	BC101472 BC101474 AF360549 TSC_hg19_v1_chr17_-_59940873 NM_032043	-202691	-	NM_001144933	304093	+	AK098684 NM_173503 BC101752 BC101778	314441	+	TSC_hg19_v1_chr17_+_60501257 NM_181725 BC006985 AB590991 AF161384 AK022822 AF161385	357778	+	BC140891|MED13|9969|mediator complex subunit 13##AF117754|MED13|9969|mediator complex subunit 13##NM_005121|MED13|9969|mediator complex subunit 13##AB033113|INTS2|57508|integrator complex subunit 2##AK308307|INTS2|57508|integrator complex subunit 2##AK299032|INTS2|57508|integrator complex subunit 2##AL136800|INTS2|57508|integrator complex subunit 2##NM_020748|INTS2|57508|integrator complex subunit 2##BC101472|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##BC101474|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AF360549|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_032043|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_001144933|EFCAB3|146779|EF-hand calcium binding domain 3##AK098684|EFCAB3|146779|EF-hand calcium binding domain 3##NM_173503|EFCAB3|146779|EF-hand calcium binding domain 3##BC101752|EFCAB3|146779|EF-hand calcium binding domain 3##BC101778|EFCAB3|146779|EF-hand calcium binding domain 3##NM_181725|METTL2A|339175|methyltransferase like 2A##BC006985|METTL2A|339175|methyltransferase like 2A##AF161384|METTL2A|339175|methyltransferase like 2A##AK022822|METTL2A|339175|methyltransferase like 2A##AF161385|METTL2A|339175|methyltransferase like 2A	1.259802	CTCF.p2:-1:0.998	CTCF.p2:-26:0.262
chr2	124784857	124784999	reg1013699.p1	9.704	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2064	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-2271691	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-2290463	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	2628779	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	2628864	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	3079813	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.625193	CTCF.p2:-33:0.625
chr2	232092159	232092293	reg1013698.p1	9.704	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-28832	+	AY219922 TSC_hg19_v1_chr2_+_232063378	-28848	+	TSC_hg19_v1_chr2_+_232063340 NM_025139 BX537956 AK309395	-28871	+	TSC_hg19_v1_chr2_+_232120778 AB055779	28552	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	168196	+	AK001314 TSC_hg19_v1_chr2_-_232326464	234203	-	AY929062|ARMC9|80210|armadillo repeat containing 9##AY219922|ARMC9|80210|armadillo repeat containing 9##NM_025139|ARMC9|80210|armadillo repeat containing 9##BX537956|ARMC9|80210|armadillo repeat containing 9##AK309395|ARMC9|80210|armadillo repeat containing 9##AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK001314|NCL|4691|nucleolin	0.012126	
chr1	79305525	79305672	reg1012496.p1	9.703	+	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-190100	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	-219467	+	NM_000959 NM_001039585 AK292845 AK312816 AY485530 L24470 BC112965 AF004021	-348814	+	BC025721 AY358360 AK292894 AK313738 NM_022159	166829	-	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	2466329	+	AF104266 AF104938 AF104939 NM_012302	2960483	+	NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##NM_000959|PTGFR|5737|prostaglandin F receptor (FP)##NM_001039585|PTGFR|5737|prostaglandin F receptor (FP)##AK292845|PTGFR|5737|prostaglandin F receptor (FP)##AK312816|PTGFR|5737|prostaglandin F receptor (FP)##AY485530|PTGFR|5737|prostaglandin F receptor (FP)##L24470|PTGFR|5737|prostaglandin F receptor (FP)##BC112965|PTGFR|5737|prostaglandin F receptor (FP)##AF004021|PTGFR|5737|prostaglandin F receptor (FP)##BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.996346	CTCF.p2:-23:0.996
chr22	33382124	33382270	reg1012706.p2	9.703	+	BC014277 TSC_hg19_v1_chr22_+_33197759	-184445	+	TSC_hg19_v1_chr22_+_33197690 AK311702 AK314871 AK298126 BC013086 U14394 AX801509 U02571 S78453 U67195	-184503	+	NM_000362	-185396	+	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	20529	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	72158	-	AJ007583 AB011181 NM_004737 NM_133642	934173	-	BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK314871|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK298126|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC013086|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U14394|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U02571|TIMP3|7078|TIMP metallopeptidase inhibitor 3##S78453|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U67195|TIMP3|7078|TIMP metallopeptidase inhibitor 3##NM_000362|TIMP3|7078|TIMP metallopeptidase inhibitor 3##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase	0.997798	CTCF.p2:1:0.998
chr22	34507346	34507470	reg1014543.p1	9.703	+	AJ007583 AB011181 NM_004737 NM_133642	-191038	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-1053053	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-1104682	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	954741	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1146068	+	AK293694 NM_001135729	1187859	+	AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)	0.56252	CTCF.p2:0:0.563
chrX	11742647	11742790	reg1014739.p1	9.703	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	-58898	-	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	-431176	+	AF177663 NM_013423 AK297713	-458610	-	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	33625	+	NM_001193270 AK300814	33999	+	NM_006800 AK025642	35029	+	AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6##AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	0.884881	CTCF.p2:4:0.885
chr1	156597309	156597450	reg1014266.p1	9.702	+	AB049054 NM_021817 AK294131 AK310758 AK308805 AK090712 AK308980 AK293797 BC029864	-8193	+	AB528795 BC032436 TSC_hg19_v1_chr1_-_156571275 BC040147 AK125763 BC056904 AK000256 AK293026 AK301232 NM_015590 NM_182679	-26122	-	TSC_hg19_v1_chr1_+_156561594 AK316083	-35777	+	TSC_hg19_v1_chr1_+_156611723 AY358372 NM_021948 NM_198427	14350	+	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	14575	+	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	49766	-	AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC032436|GPATCH4|54865|G patch domain containing 4##BC040147|GPATCH4|54865|G patch domain containing 4##AK125763|GPATCH4|54865|G patch domain containing 4##BC056904|GPATCH4|54865|G patch domain containing 4##AK000256|GPATCH4|54865|G patch domain containing 4##AK293026|GPATCH4|54865|G patch domain containing 4##AK301232|GPATCH4|54865|G patch domain containing 4##NM_015590|GPATCH4|54865|G patch domain containing 4##NM_182679|GPATCH4|54865|G patch domain containing 4##AY358372|BCAN|63827|brevican##NM_021948|BCAN|63827|brevican##NM_198427|BCAN|63827|brevican##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin	0.943243	CTCF.p2:8:0.943
chr12	16052359	16052480	reg1011799.p2	9.702	+	AJ010025 BC000162 TSC_hg19_v1_chr12_+_16035508 U56430 AY049776 DQ890951 DQ894113 AB385074 CU674068 BT020044 BT020045	-16851	+	NM_007178 TSC_hg19_v1_chr12_+_16035321 AK074607 AK315891 AK297942 BC062306 AF161496 AB024327 AL136691 AK312295	-17089	+	TSC_hg19_v1_chr12_-_15942350 AK304860 NM_004447	-109990	-	BC041328 NM_015954 TSC_hg19_v1_chr12_+_16064223	11747	+	TSC_hg19_v1_chr12_+_16064265 BC056234	11837	+	TSC_hg19_v1_chr12_+_16064282 AK024614 AK222541 AK296697	11872	+	AJ010025|STRAP|11171|serine/threonine kinase receptor associated protein##BC000162|STRAP|11171|serine/threonine kinase receptor associated protein##AY049776|STRAP|11171|serine/threonine kinase receptor associated protein##DQ890951|STRAP|11171|serine/threonine kinase receptor associated protein##DQ894113|STRAP|11171|serine/threonine kinase receptor associated protein##BT020044|STRAP|11171|serine/threonine kinase receptor associated protein##BT020045|STRAP|11171|serine/threonine kinase receptor associated protein##NM_007178|STRAP|11171|serine/threonine kinase receptor associated protein##AK315891|STRAP|11171|serine/threonine kinase receptor associated protein##AK297942|STRAP|11171|serine/threonine kinase receptor associated protein##BC062306|STRAP|11171|serine/threonine kinase receptor associated protein##AF161496|STRAP|11171|serine/threonine kinase receptor associated protein##AB024327|STRAP|11171|serine/threonine kinase receptor associated protein##AL136691|STRAP|11171|serine/threonine kinase receptor associated protein##AK312295|STRAP|11171|serine/threonine kinase receptor associated protein##AK304860|EPS8|2059|epidermal growth factor receptor pathway substrate 8##NM_004447|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC041328|DERA|51071|deoxyribose-phosphate aldolase (putative)##NM_015954|DERA|51071|deoxyribose-phosphate aldolase (putative)##BC056234|DERA|51071|deoxyribose-phosphate aldolase (putative)##AK024614|DERA|51071|deoxyribose-phosphate aldolase (putative)##AK222541|DERA|51071|deoxyribose-phosphate aldolase (putative)##AK296697|DERA|51071|deoxyribose-phosphate aldolase (putative)	0.978108	CTCF.p2:3:0.978
chr2	34321791	34321906	reg1013877.p1	9.702	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-497503	-	AB020653 NM_015376	-582907	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-620152	+	TSC_hg19_v1_chr2_+_36582920 AY358371	2261114	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	2261554	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	2503434	-	BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	0.998421	CTCF.p2:-10:0.998
chr11	86319557	86319670	reg1008456.p2	9.701	+	AK131331 NM_001156474 NM_021827	-233836	+	NM_016401 TSC_hg19_v1_chr11_+_86013281 AF161487 AF161527 AK001447 AK223198 BC015991 BC021621 AK298763 BC018080 BC001677 BC006476 DQ892731 DQ895977 CU674828 CU676162	-306244	+	TSC_hg19_v1_chr11_+_85956277 BC068995 AK294133 CU686693 AB463023 EU446743 AF078933 AK301265 BC047672	-363327	+	TSC_hg19_v1_chr11_-_86383218 BC022472 NM_001014811 AK092181	63592	-	X79440 TSC_hg19_v1_chr11_-_86383470 NM_006680 AK313695	63829	-	TSC_hg19_v1_chr11_-_86383659 AK300974 NM_001161586	64052	-	AK131331|CCDC81|60494|coiled-coil domain containing 81##NM_001156474|CCDC81|60494|coiled-coil domain containing 81##NM_021827|CCDC81|60494|coiled-coil domain containing 81##NM_016401|C11orf73|51501|chromosome 11 open reading frame 73##AF161487|C11orf73|51501|chromosome 11 open reading frame 73##AF161527|C11orf73|51501|chromosome 11 open reading frame 73##AK001447|C11orf73|51501|chromosome 11 open reading frame 73##AK223198|C11orf73|51501|chromosome 11 open reading frame 73##BC015991|C11orf73|51501|chromosome 11 open reading frame 73##BC021621|C11orf73|51501|chromosome 11 open reading frame 73##AK298763|C11orf73|51501|chromosome 11 open reading frame 73##BC018080|C11orf73|51501|chromosome 11 open reading frame 73##BC001677|C11orf73|51501|chromosome 11 open reading frame 73##BC006476|C11orf73|51501|chromosome 11 open reading frame 73##DQ892731|C11orf73|51501|chromosome 11 open reading frame 73##DQ895977|C11orf73|51501|chromosome 11 open reading frame 73##BC068995|EED|8726|embryonic ectoderm development##AK294133|EED|8726|embryonic ectoderm development##EU446743|EED|8726|embryonic ectoderm development##AF078933|EED|8726|embryonic ectoderm development##AK301265|EED|8726|embryonic ectoderm development##BC047672|EED|8726|embryonic ectoderm development##BC022472|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001014811|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK092181|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##X79440|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_006680|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK313695|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK300974|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001161586|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial	0.896321	CTCF.p2:-8:0.896
chr1	223816011	223816136	reg1013541.p1	9.701	+	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	-249308	+	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	-278602	-	TSC_hg19_v1_chr1_-_223316591 NM_003268	-499467	-	TSC_hg19_v1_chr1_-_223853364 BC157893	37297	-	TSC_hg19_v1_chr1_-_223853404 NM_001143962	37344	-	AK316211 AK297800 NM_001146068	73200	+	NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4##NM_003268|TLR5|7100|toll-like receptor 5##BC157893|CAPN8|388743|calpain 8##NM_001143962|CAPN8|388743|calpain 8##AK316211|CAPN2|824|calpain 2, (m/II) large subunit##AK297800|CAPN2|824|calpain 2, (m/II) large subunit##NM_001146068|CAPN2|824|calpain 2, (m/II) large subunit	0.99947	CTCF.p2:0:0.999
chr9	27888811	27888957	reg1015536.p1	9.701	+	AK057806 JN681271 NM_145005	-315043	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-315413	-	TSC_hg19_v1_chr9_-_27529809 AL832572 BC033027 AK023266 NM_024761	-359234	-	AK056372 NM_152570	830418	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	4495706	+	TSC_hg19_v1_chr9_+_32384622 AK057904	4495743	+	AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##AL832572|MOB3B|79817|MOB kinase activator 3B##BC033027|MOB3B|79817|MOB kinase activator 3B##AK023266|MOB3B|79817|MOB kinase activator 3B##NM_024761|MOB3B|79817|MOB kinase activator 3B##AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble	0.032196	
chr13	32820669	32820794	reg1012445.p2	9.700	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	-215290	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-399829	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-507018	+	BC146956 BC146965 NM_001136571	65358	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	68886	+	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	181627	-	AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1	0.459046	CTCF.p2:-10:0.459
chr4	150902122	150902249	reg1013862.p1	9.700	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-1538601	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-1538846	-	TSC_hg19_v1_chr4_-_149357955 AB587357	-1544203	-	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	97340	+	NM_006439	600891	+	TSC_hg19_v1_chr4_-_151770612 AB208838	868464	-	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.431792	CTCF.p2:3:0.432
chr6	722121	722251	reg1013231.p1	9.700	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-29096	-	AF508547 BC101697 BC101699 NM_148959	-65233	-	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-330422	+	BC053850 NM_033260	590488	+	NM_001452 U13220 AB463646	667939	+	BC134421 NM_001453	888494	+	AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1	0.815725	CTCF.p2:-13:0.816
chrY	1721261	1721368	reg1012083.p1	9.700	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	-37311	+	NM_004043 U11090	-56967	+	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	-60785	+	BC015030 NM_001171135	647265	-	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	647674	-	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	837998	+	AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015030|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1##BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule	0.995006	CTCF.p2:0:0.995
chr15	43733174	43733283	reg1009988.p1	9.699	+	TSC_hg19_v1_chr15_+_43663381 AJ249677 CU680398 DQ896017 EU176400	-69777	+	TSC_hg19_v1_chr15_+_43663298 AK027703 BC012801 NM_014444 BC009870	-69925	+	AF525399 BC109270 BC109271 AB527871 AK122788 NM_152455 BC043612	-71045	-	TSC_hg19_v1_chr15_-_43785355 AK292915 BC017846 AB210025 BX537418 AK295764 AK307405 NM_001141979 NM_001141980	52082	-	BC063119 TSC_hg19_v1_chr15_-_43785370	52158	-	BC112161 NM_005657 AF078776 TSC_hg19_v1_chr15_-_43802798	69508	-	AJ249677|TUBGCP4|27229|tubulin, gamma complex associated protein 4##DQ896017|TUBGCP4|27229|tubulin, gamma complex associated protein 4##EU176400|TUBGCP4|27229|tubulin, gamma complex associated protein 4##AK027703|TUBGCP4|27229|tubulin, gamma complex associated protein 4##BC012801|TUBGCP4|27229|tubulin, gamma complex associated protein 4##NM_014444|TUBGCP4|27229|tubulin, gamma complex associated protein 4##BC009870|TUBGCP4|27229|tubulin, gamma complex associated protein 4##AF525399|ZSCAN29|146050|zinc finger and SCAN domain containing 29##BC109270|ZSCAN29|146050|zinc finger and SCAN domain containing 29##BC109271|ZSCAN29|146050|zinc finger and SCAN domain containing 29##AK122788|ZSCAN29|146050|zinc finger and SCAN domain containing 29##NM_152455|ZSCAN29|146050|zinc finger and SCAN domain containing 29##BC043612|ZSCAN29|146050|zinc finger and SCAN domain containing 29##AK292915|TP53BP1|7158|tumor protein p53 binding protein 1##BC017846|TP53BP1|7158|tumor protein p53 binding protein 1##AB210025|TP53BP1|7158|tumor protein p53 binding protein 1##BX537418|TP53BP1|7158|tumor protein p53 binding protein 1##AK295764|TP53BP1|7158|tumor protein p53 binding protein 1##AK307405|TP53BP1|7158|tumor protein p53 binding protein 1##NM_001141979|TP53BP1|7158|tumor protein p53 binding protein 1##NM_001141980|TP53BP1|7158|tumor protein p53 binding protein 1##BC063119|TP53BP1|7158|tumor protein p53 binding protein 1##BC112161|TP53BP1|7158|tumor protein p53 binding protein 1##NM_005657|TP53BP1|7158|tumor protein p53 binding protein 1##AF078776|TP53BP1|7158|tumor protein p53 binding protein 1	0.990986	CTCF.p2:-27:0.991
chr2	205190242	205190375	reg1014190.p1	9.699	+	AK314985 AJ277832 NM_012092 BC028006 BC028210 AB023135 AF218312 CU688368 CU688430	-388814	+	BC070162 AF414120 NM_001037631 NM_005214 AK313732 BC069566 BC074893 BC074842 AB590653 AF486806 AY209009 AY792514 AY999702 DQ785106 L15006	-457721	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	-618909	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	220182	+	TSC_hg19_v1_chr2_+_205410560 AX765687 AX765741 AK056157	220286	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	220411	+	AK314985|ICOS|29851|inducible T-cell co-stimulator##AJ277832|ICOS|29851|inducible T-cell co-stimulator##NM_012092|ICOS|29851|inducible T-cell co-stimulator##BC028006|ICOS|29851|inducible T-cell co-stimulator##BC028210|ICOS|29851|inducible T-cell co-stimulator##AB023135|ICOS|29851|inducible T-cell co-stimulator##BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK056157|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)	0.794077	CTCF.p2:-3:0.794
chr2	38830693	38830820	reg1013638.p1	9.698	+	AK000155 TSC_hg19_v1_chr2_-_38830104 AK292259 NM_001142650 NM_138394	-615	-	TSC_hg19_v1_chr2_-_38830071 BC008217	-684	-	TSC_hg19_v1_chr2_-_38830065 AY236963 BC017480 AK291462	-716	-	NM_138801 TSC_hg19_v1_chr2_+_38893054	62296	+	BC019263 TSC_hg19_v1_chr2_+_38893258 AK291489 U11036 BC014916	62499	+	AB445102 BT006745 AB527733 AK091425 AX746975 AY513287 AF055270 BC000997 BC017369 BC017908 BC022328 TSC_hg19_v1_chr2_-_38978504 AK225141 AK293667 AK297161 L22253 AY166860 NM_001031684 NM_001195446	147760	-	AK000155|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AK292259|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##NM_001142650|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##NM_138394|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##BC008217|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##NM_138801|GALM|130589|galactose mutarotase (aldose 1-epimerase)##BC019263|GALM|130589|galactose mutarotase (aldose 1-epimerase)##AK291489|GALM|130589|galactose mutarotase (aldose 1-epimerase)##U11036|GALM|130589|galactose mutarotase (aldose 1-epimerase)##BC014916|GALM|130589|galactose mutarotase (aldose 1-epimerase)##AB445102|SRSF7|6432|serine/arginine-rich splicing factor 7##BT006745|SRSF7|6432|serine/arginine-rich splicing factor 7##AK091425|SRSF7|6432|serine/arginine-rich splicing factor 7##AY513287|SRSF7|6432|serine/arginine-rich splicing factor 7##AF055270|SRSF7|6432|serine/arginine-rich splicing factor 7##BC000997|SRSF7|6432|serine/arginine-rich splicing factor 7##BC017369|SRSF7|6432|serine/arginine-rich splicing factor 7##BC017908|SRSF7|6432|serine/arginine-rich splicing factor 7##BC022328|SRSF7|6432|serine/arginine-rich splicing factor 7##AK225141|SRSF7|6432|serine/arginine-rich splicing factor 7##AK293667|SRSF7|6432|serine/arginine-rich splicing factor 7##AK297161|SRSF7|6432|serine/arginine-rich splicing factor 7##L22253|SRSF7|6432|serine/arginine-rich splicing factor 7##AY166860|SRSF7|6432|serine/arginine-rich splicing factor 7##NM_001031684|SRSF7|6432|serine/arginine-rich splicing factor 7##NM_001195446|SRSF7|6432|serine/arginine-rich splicing factor 7	0.019881	
chr1	25176313	25176443	reg1013822.p1	9.697	+	TSC_hg19_v1_chr1_+_25071976 AF109196 AB463494 AM393644 CU680328 CR533501	-104373	+	TSC_hg19_v1_chr1_+_25071937 AK315051 AK301466 AK307142	-104445	+	NM_013943 TSC_hg19_v1_chr1_+_25071875 AL117424 AK001624 AK095959 BC012444 AF097330	-104547	+	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	80047	-	TSC_hg19_v1_chr1_-_25256761 AK301044	80361	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	80408	-	AF109196|CLIC4|25932|chloride intracellular channel 4##AM393644|CLIC4|25932|chloride intracellular channel 4##CR533501|CLIC4|25932|chloride intracellular channel 4##AK315051|CLIC4|25932|chloride intracellular channel 4##AK301466|CLIC4|25932|chloride intracellular channel 4##AK307142|CLIC4|25932|chloride intracellular channel 4##NM_013943|CLIC4|25932|chloride intracellular channel 4##AL117424|CLIC4|25932|chloride intracellular channel 4##AK001624|CLIC4|25932|chloride intracellular channel 4##AK095959|CLIC4|25932|chloride intracellular channel 4##BC012444|CLIC4|25932|chloride intracellular channel 4##AF097330|CLIC4|25932|chloride intracellular channel 4##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3	0.157527	
chr1	25531464	25531620	reg1014901.p1	9.697	+	BC013362 AK310945 NM_001031680 AF022726	-240000	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-274756	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-274803	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	27445	-	BC065040 TSC_hg19_v1_chr1_-_25573922	42381	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	42431	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.998405	CTCF.p2:-8:0.998
chr6	138266159	138266299	reg1012159.p2	9.696	+	TSC_hg19_v1_chr6_-_138189314 AK124173	-76879	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-77692	+	BC051352 AK096362 NM_175747	-450704	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	162339	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	216907	+	BC069109 NM_021635 AF189269 AF189270	273397	-	AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1	0.969109	CTCF.p2:17:0.969
chrX	16141464	16141585	reg1013026.p2	9.696	+	NM_005314	-101	+	TSC_hg19_v1_chrX_-_15873104 NM_003916	-268421	-	AK130075 TSC_hg19_v1_chrX_-_15872938	-268586	-	L13220 NM_004057 X65869 BC112174	526773	+	AK125332 NM_001144002	588815	-	TSC_hg19_v1_chrX_-_16730802 NM_175859 BC034986 AK125348 AF226667 AK024070 AK023549 NM_019857	589339	-	NM_005314|GRPR|2925|gastrin-releasing peptide receptor##NM_003916|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##L13220|S100G|795|S100 calcium binding protein G##NM_004057|S100G|795|S100 calcium binding protein G##X65869|S100G|795|S100 calcium binding protein G##BC112174|S100G|795|S100 calcium binding protein G##AK125332|CTPS2|56474|CTP synthase II##NM_001144002|CTPS2|56474|CTP synthase II##NM_175859|CTPS2|56474|CTP synthase II##BC034986|CTPS2|56474|CTP synthase II##AK125348|CTPS2|56474|CTP synthase II##AF226667|CTPS2|56474|CTP synthase II##AK024070|CTPS2|56474|CTP synthase II##AK023549|CTPS2|56474|CTP synthase II##NM_019857|CTPS2|56474|CTP synthase II	0.882447	CTCF.p2:-5:0.882
chr10	107710224	107710359	reg1014027.p1	9.695	+	BC117417 TSC_hg19_v1_chr10_+_106401047	-1309246	+	AB028982 NM_014978	-1309433	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-1596750	+	TSC_hg19_v1_chr10_-_108459000 AK123752	748768	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	1214085	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	3972918	-	BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.996222	CTCF.p2:1:0.996
chr1	167093416	167093555	reg1014777.p1	9.695	+	NM_001080426	-29399	+	CU687006 BC074830 BC074876 TSC_hg19_v1_chr1_-_167059615 BC107164 BC107165 AK312833 BC069705 BC069723 BC069745 BC069761 BC069789 NM_005814 U79725	-33790	-	TSC_hg19_v1_chr1_+_166958503 AK302253 AK131066 DQ076156 GU383113 AK027810 NM_032858 BC028595 AB590622 CU688524	-134943	+	TSC_hg19_v1_chr1_+_167190127 NM_001198786 NM_002697 AK302525 AK303201 AK308004 AK091438 S66901 BC052274 X13403	96572	+	NM_001198783 TSC_hg19_v1_chr1_+_167298306	204813	+	TSC_hg19_v1_chr1_+_167298389 AY113189 BC001664 BC003571	204954	+	NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)##BC074830|GPA33|10223|glycoprotein A33 (transmembrane)##BC074876|GPA33|10223|glycoprotein A33 (transmembrane)##BC107164|GPA33|10223|glycoprotein A33 (transmembrane)##BC107165|GPA33|10223|glycoprotein A33 (transmembrane)##AK312833|GPA33|10223|glycoprotein A33 (transmembrane)##BC069705|GPA33|10223|glycoprotein A33 (transmembrane)##BC069723|GPA33|10223|glycoprotein A33 (transmembrane)##BC069745|GPA33|10223|glycoprotein A33 (transmembrane)##BC069761|GPA33|10223|glycoprotein A33 (transmembrane)##BC069789|GPA33|10223|glycoprotein A33 (transmembrane)##NM_005814|GPA33|10223|glycoprotein A33 (transmembrane)##U79725|GPA33|10223|glycoprotein A33 (transmembrane)##AK302253|MAEL|84944|maelstrom homolog (Drosophila)##AK131066|MAEL|84944|maelstrom homolog (Drosophila)##DQ076156|MAEL|84944|maelstrom homolog (Drosophila)##GU383113|MAEL|84944|maelstrom homolog (Drosophila)##AK027810|MAEL|84944|maelstrom homolog (Drosophila)##NM_032858|MAEL|84944|maelstrom homolog (Drosophila)##BC028595|MAEL|84944|maelstrom homolog (Drosophila)##NM_001198786|POU2F1|5451|POU class 2 homeobox 1##NM_002697|POU2F1|5451|POU class 2 homeobox 1##AK302525|POU2F1|5451|POU class 2 homeobox 1##AK303201|POU2F1|5451|POU class 2 homeobox 1##AK308004|POU2F1|5451|POU class 2 homeobox 1##AK091438|POU2F1|5451|POU class 2 homeobox 1##BC052274|POU2F1|5451|POU class 2 homeobox 1##X13403|POU2F1|5451|POU class 2 homeobox 1##NM_001198783|POU2F1|5451|POU class 2 homeobox 1##AY113189|POU2F1|5451|POU class 2 homeobox 1##BC001664|POU2F1|5451|POU class 2 homeobox 1##BC003571|POU2F1|5451|POU class 2 homeobox 1	0.993464	CTCF.p2:-5:0.993
chr2	241853899	241854021	reg1012060.p2	9.695	+	AK056601 NM_001085437	-18388	-	BC125154 BC125155 AK026324 NM_024861 AK096434	-22541	-	NM_000030 X53414 BC132819 D13368 S71388 AK315331 TSC_hg19_v1_chr2_+_241808251 AK292754 AK298420 AB292648 X56092 AF348451 AK298400 AK316495	-45692	+	NM_001080437	84294	+	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	187766	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	234911	-	AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54##NM_000030|AGXT|189|alanine-glyoxylate aminotransferase##X53414|AGXT|189|alanine-glyoxylate aminotransferase##BC132819|AGXT|189|alanine-glyoxylate aminotransferase##D13368|AGXT|189|alanine-glyoxylate aminotransferase##AK315331|AGXT|189|alanine-glyoxylate aminotransferase##AK292754|AGXT|189|alanine-glyoxylate aminotransferase##AK298420|AGXT|189|alanine-glyoxylate aminotransferase##AB292648|AGXT|189|alanine-glyoxylate aminotransferase##X56092|AGXT|189|alanine-glyoxylate aminotransferase##AF348451|AGXT|189|alanine-glyoxylate aminotransferase##AK298400|AGXT|189|alanine-glyoxylate aminotransferase##AK316495|AGXT|189|alanine-glyoxylate aminotransferase##NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase	0.746906	CTCF.p2:3:0.747
chr6	12603760	12603887	reg1012463.p1	9.695	+	TSC_hg19_v1_chr6_+_12514301 D28417	-89521	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	-313230	+	NM_002114	-591100	+	AK295263 TSC_hg19_v1_chr6_+_12716998	113120	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	113220	+	AK091836 AX747210 NM_001242698	691994	-	NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357	0.863907	CTCF.p2:13:0.864
chr11	3058641	3058770	reg1013770.p1	9.694	+	TSC_hg19_v1_chr11_-_3013610 NM_005969 U77456 AK312599	-45106	-	AK316324 TSC_hg19_v1_chr11_-_3013560	-45150	-	TSC_hg19_v1_chr11_-_3013522 AK299515	-45180	-	BT009913 CU678270 DQ890773 AK308005 TSC_hg19_v1_chr11_-_3078625 AB208814 AF288206 AF288207 AK222614 AK296763 AK131221 AK096313 AK295371 AK298514 AK302644 BX647906 AK289432 BC002880 NM_001014437 NM_001194997 NM_001751 NM_139273	19933	-	AK301003 TSC_hg19_v1_chr11_-_3147850	89138	-	TSC_hg19_v1_chr11_-_3186504 BC032646 BC039579 AF392453 AL136918	127784	-	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4##U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4##BT009913|CARS|833|cysteinyl-tRNA synthetase##DQ890773|CARS|833|cysteinyl-tRNA synthetase##AK308005|CARS|833|cysteinyl-tRNA synthetase##AB208814|CARS|833|cysteinyl-tRNA synthetase##AF288206|CARS|833|cysteinyl-tRNA synthetase##AF288207|CARS|833|cysteinyl-tRNA synthetase##AK222614|CARS|833|cysteinyl-tRNA synthetase##AK296763|CARS|833|cysteinyl-tRNA synthetase##AK131221|CARS|833|cysteinyl-tRNA synthetase##AK096313|CARS|833|cysteinyl-tRNA synthetase##AK295371|CARS|833|cysteinyl-tRNA synthetase##AK298514|CARS|833|cysteinyl-tRNA synthetase##AK302644|CARS|833|cysteinyl-tRNA synthetase##BX647906|CARS|833|cysteinyl-tRNA synthetase##AK289432|CARS|833|cysteinyl-tRNA synthetase##BC002880|CARS|833|cysteinyl-tRNA synthetase##NM_001014437|CARS|833|cysteinyl-tRNA synthetase##NM_001194997|CARS|833|cysteinyl-tRNA synthetase##NM_001751|CARS|833|cysteinyl-tRNA synthetase##NM_139273|CARS|833|cysteinyl-tRNA synthetase##AK301003|OSBPL5|114879|oxysterol binding protein-like 5##BC032646|OSBPL5|114879|oxysterol binding protein-like 5##BC039579|OSBPL5|114879|oxysterol binding protein-like 5##AF392453|OSBPL5|114879|oxysterol binding protein-like 5##AL136918|OSBPL5|114879|oxysterol binding protein-like 5	0.958646	CTCF.p2:-13:0.959
chr2	85906442	85906560	reg1011213.p2	9.694	+	NM_000542 NM_198843	-10638	-	TSC_hg19_v1_chr2_-_85888519 AB439563 AB439564 AB439565 AB439566	-17926	-	TSC_hg19_v1_chr2_+_85843375 AK309485	-63108	+	NM_006433 NM_012483 X54101 AK310057 AK311537 AK311012 AK311657 BC063245 AK304728 TSC_hg19_v1_chr2_+_85921514 DQ892267 DQ895468 BC023576 CR541859 X05044	14979	+	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	74504	+	AY152815 NM_001042437	188291	-	NM_000542|SFTPB|6439|surfactant protein B##NM_198843|SFTPB|6439|surfactant protein B##AB439563|SFTPB|6439|surfactant protein B##AB439565|SFTPB|6439|surfactant protein B##AK309485|USP39|10713|ubiquitin specific peptidase 39##NM_006433|GNLY|10578|granulysin##NM_012483|GNLY|10578|granulysin##X54101|GNLY|10578|granulysin##AK310057|GNLY|10578|granulysin##AK311537|GNLY|10578|granulysin##AK311012|GNLY|10578|granulysin##AK311657|GNLY|10578|granulysin##BC063245|GNLY|10578|granulysin##AK304728|GNLY|10578|granulysin##DQ892267|GNLY|10578|granulysin##DQ895468|GNLY|10578|granulysin##BC023576|GNLY|10578|granulysin##CR541859|GNLY|10578|granulysin##X05044|GNLY|10578|granulysin##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	0.914166	CTCF.p2:-6:0.914
chr3	50628421	50628541	reg1012098.p2	9.694	+	AF188706 NM_001171741	-20042	-	TSC_hg19_v1_chr3_+_50606919 BX537562 NM_016173 AK314023 AF172244 AK124369	-21533	+	AK124438 AK311093 TSC_hg19_v1_chr3_-_50605192 BC034766 AK313128 AK308074 AK309486 AL833938 AK130227 NM_001171740 NM_001171743 NM_016210	-23338	-	CU689192 AB528903 BC064354 TSC_hg19_v1_chr3_-_50649104	20611	-	TSC_hg19_v1_chr3_-_50649206 AF035947 D83532 BC031590 AF132297 AK313850 NM_013324 NM_145071	20736	-	NM_001243926 BC068497	20834	+	AF188706|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171741|C3orf18|51161|chromosome 3 open reading frame 18##BX537562|HEMK1|51409|HemK methyltransferase family member 1##NM_016173|HEMK1|51409|HemK methyltransferase family member 1##AK314023|HEMK1|51409|HemK methyltransferase family member 1##AF172244|HEMK1|51409|HemK methyltransferase family member 1##AK124369|HEMK1|51409|HemK methyltransferase family member 1##AK124438|C3orf18|51161|chromosome 3 open reading frame 18##AK311093|C3orf18|51161|chromosome 3 open reading frame 18##BC034766|C3orf18|51161|chromosome 3 open reading frame 18##AK313128|C3orf18|51161|chromosome 3 open reading frame 18##AK308074|C3orf18|51161|chromosome 3 open reading frame 18##AK309486|C3orf18|51161|chromosome 3 open reading frame 18##AL833938|C3orf18|51161|chromosome 3 open reading frame 18##AK130227|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171740|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171743|C3orf18|51161|chromosome 3 open reading frame 18##NM_016210|C3orf18|51161|chromosome 3 open reading frame 18##BC064354|CISH|1154|cytokine inducible SH2-containing protein##AF035947|CISH|1154|cytokine inducible SH2-containing protein##D83532|CISH|1154|cytokine inducible SH2-containing protein##BC031590|CISH|1154|cytokine inducible SH2-containing protein##AF132297|CISH|1154|cytokine inducible SH2-containing protein##AK313850|CISH|1154|cytokine inducible SH2-containing protein##NM_013324|CISH|1154|cytokine inducible SH2-containing protein##NM_145071|CISH|1154|cytokine inducible SH2-containing protein##NM_001243926|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC068497|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3	0.648951	CTCF.p2:10:0.649
chr18	39325546	39325647	reg1012507.p1	9.693	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-1945328	-	TSC_hg19_v1_chr18_-_36915657 D28405	-2409940	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	-4179597	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	209603	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	209637	+	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	1369973	-	AK090603|LOC647946|647946|uncharacterized LOC647946##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2	0.929828	CTCF.p2:5:0.930
chr20	16782717	16782826	reg1012024.p1	9.693	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	-53750	+	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	-72108	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	-228758	-	BC040546 NM_001201528	423980	+	NM_001201529 NM_002594 TSC_hg19_v1_chr20_+_17207617	424839	+	BC001905 TSC_hg19_v1_chr20_+_17207673	424900	+	BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##BC040546|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201528|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201529|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	0.405195	CTCF.p2:-17:0.405
chr22	22081091	22081204	reg1013672.p1	9.693	+	NM_014337 NM_148175 NM_148176 TSC_hg19_v1_chr22_+_22020298 AF320072 AK289545 BC000022 U37219 AK127259 BC028385 AK299206 CR456548 DQ891659 DQ894846 AB463162 CU013148 CU013436 CU673996 CU688484	-60818	+	TSC_hg19_v1_chr22_+_21996619 CR456570 AF277316 AB528230 BC139837 CU013169 CU013457	-84508	+	TSC_hg19_v1_chr22_+_21996608 BC006248 AB043007	-84546	+	BC034486 BC074501 TSC_hg19_v1_chr22_-_22090057 BC048303 NM_013313 AB098734 AB098735	8901	-	TSC_hg19_v1_chr22_-_22221936 DQ399292 AB384931 EU176323 EU831429 EU831522 AK307615 Z11694 AK090869 BC099905	140682	-	AK295188 TSC_hg19_v1_chr22_-_22221938	140790	-	NM_014337|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148175|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148176|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AF320072|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK289545|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC000022|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##U37219|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK127259|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC028385|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK299206|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456548|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ891659|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ894846|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013148|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013436|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456570|SDF2L1|23753|stromal cell-derived factor 2-like 1##AF277316|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC139837|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013169|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013457|SDF2L1|23753|stromal cell-derived factor 2-like 1##AB043007|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC034486|YPEL1|29799|yippee-like 1 (Drosophila)##BC074501|YPEL1|29799|yippee-like 1 (Drosophila)##BC048303|YPEL1|29799|yippee-like 1 (Drosophila)##NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)##AB098734|YPEL1|29799|yippee-like 1 (Drosophila)##AB098735|YPEL1|29799|yippee-like 1 (Drosophila)##DQ399292|MAPK1|5594|mitogen-activated protein kinase 1##EU176323|MAPK1|5594|mitogen-activated protein kinase 1##EU831429|MAPK1|5594|mitogen-activated protein kinase 1##EU831522|MAPK1|5594|mitogen-activated protein kinase 1##AK307615|MAPK1|5594|mitogen-activated protein kinase 1##Z11694|MAPK1|5594|mitogen-activated protein kinase 1##AK090869|MAPK1|5594|mitogen-activated protein kinase 1##BC099905|MAPK1|5594|mitogen-activated protein kinase 1##AK295188|MAPK1|5594|mitogen-activated protein kinase 1	0.823385	CTCF.p2:-13:0.823
chr4	125255349	125255442	reg1011907.p1	9.693	+	AK026960 BC063856 NM_005841	-934722	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-937439	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-1411143	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	378419	-	NM_024582	982171	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	3298744	+	AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	0.965024	CTCF.p2:-9:0.965
chr11	63920648	63920789	reg1014616.p1	9.692	+	AY358308 BC018370 NM_013280	-49418	+	TSC_hg19_v1_chr11_+_63754327 AK307413	-166405	+	BC010368 BC107701 TSC_hg19_v1_chr11_+_63753917 AK303228 AF161381 AK225133 AL096714 AK091830 BC007519 AY177200 CU675687 CU679683	-166798	+	AF086206 BC003188 TSC_hg19_v1_chr11_-_63933439	12603	-	TSC_hg19_v1_chr11_-_63933585 AF202922 BC000270 BC007297 BC008316 NM_014067	12837	-	NM_006819 TSC_hg19_v1_chr11_+_63953613	32887	+	AY358308|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##BC018370|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##NM_013280|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AF086206|MACROD1|28992|MACRO domain containing 1##BC003188|MACROD1|28992|MACRO domain containing 1##AF202922|MACROD1|28992|MACRO domain containing 1##BC000270|MACROD1|28992|MACRO domain containing 1##BC007297|MACROD1|28992|MACRO domain containing 1##BC008316|MACROD1|28992|MACRO domain containing 1##NM_014067|MACROD1|28992|MACRO domain containing 1##NM_006819|STIP1|10963|stress-induced-phosphoprotein 1	0.987242	CTCF.p2:0:0.987
chr15	56345075	56345190	reg1011680.p1	9.692	+	TSC_hg19_v1_chr15_-_56285776 BC035707 AK304394 AY550969 BC152452 BC152562 D42055 NM_006154	-59337	-	BC136605 BC144284 BC144285 AL832063 NM_198400	-135816	-	AY630258 NM_173814 TSC_hg19_v1_chr15_-_56035276	-309906	-	TSC_hg19_v1_chr15_-_56388663 AL832584	43565	-	TSC_hg19_v1_chr15_-_56535479 NM_022841	190350	-	TSC_hg19_v1_chr15_+_56657623 AK294960 BC028119 NM_198524 AL832050	312497	+	BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY630258|PRTG|283659|protogenin##NM_173814|PRTG|283659|protogenin##AL832584|RFX7|64864|regulatory factor X, 7##NM_022841|RFX7|64864|regulatory factor X, 7##AK294960|TEX9|374618|testis expressed 9##BC028119|TEX9|374618|testis expressed 9##NM_198524|TEX9|374618|testis expressed 9##AL832050|TEX9|374618|testis expressed 9	0.247263	CTCF.p2:29:0.247
chr16	629197	629334	reg1012673.p2	9.692	+	TSC_hg19_v1_chr16_+_619980 AB003723 NM_148920 BC006377 AF030177 BC010094	-9250	+	TSC_hg19_v1_chr16_+_619967 NM_004204	-9329	+	AK314361 AK093527 AX748186 BC048340 BC032015 NM_176677	-12245	+	NM_001172663	10091	+	NM_001172664	10403	+	TSC_hg19_v1_chr16_+_640067 NM_001172665 NM_001172666	10802	+	AB003723|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##NM_148920|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##BC006377|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##AF030177|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##BC010094|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##NM_004204|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##AK314361|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##AK093527|NHLRC4|283948|NHL repeat containing 4##BC048340|NHLRC4|283948|NHL repeat containing 4##BC032015|NHLRC4|283948|NHL repeat containing 4##NM_176677|NHLRC4|283948|NHL repeat containing 4##NM_001172663|RAB40C|57799|RAB40C, member RAS oncogene family##NM_001172664|RAB40C|57799|RAB40C, member RAS oncogene family##NM_001172665|RAB40C|57799|RAB40C, member RAS oncogene family##NM_001172666|RAB40C|57799|RAB40C, member RAS oncogene family	0.993398	CTCF.p2:-1:0.993
chr11	76906934	76907038	reg1012370.p1	9.691	+	TSC_hg19_v1_chr11_+_76883833 BC023212	-23138	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	-67658	+	CU686775 BC069115 BC069365 NM_006189	-93102	+	AY313782 AY326450 NM_182833	91476	-	TSC_hg19_v1_chr11_-_77122998 AK296006 AK055228	216013	-	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	277846	-	BC023212|MYO7A|4647|myosin VIIA##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA##BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein##AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AK296006|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK055228|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	0.865087	CTCF.p2:-6:0.865
chr2	21540155	21540290	reg1014391.p1	9.689	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-273293	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-273323	-	TSC_hg19_v1_chr2_-_21266818 AB587530 HM487065 M14081 M14162 BC051278	-273401	-	NM_052920	2068075	+	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	2609724	-	TSC_hg19_v1_chr2_+_24150144 BC037901	2609935	+	AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##HM487065|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14081|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14162|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC051278|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A	0.998005	CTCF.p2:-12:0.998
chr2	75904545	75904673	reg1012005.p1	9.689	+	TSC_hg19_v1_chr2_+_75873908 NM_014763 AK295578 AK291250 BC030144 CU688824 AB463123 BC021051 D14660 DQ892303 DQ895502	-30671	+	AK023453 NM_032181	-107762	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	-116519	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	33110	-	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	33442	-	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	1844809	-	NM_014763|MRPL19|9801|mitochondrial ribosomal protein L19##AK295578|MRPL19|9801|mitochondrial ribosomal protein L19##AK291250|MRPL19|9801|mitochondrial ribosomal protein L19##BC030144|MRPL19|9801|mitochondrial ribosomal protein L19##BC021051|MRPL19|9801|mitochondrial ribosomal protein L19##D14660|MRPL19|9801|mitochondrial ribosomal protein L19##DQ892303|MRPL19|9801|mitochondrial ribosomal protein L19##DQ895502|MRPL19|9801|mitochondrial ribosomal protein L19##AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4	0.999512	CTCF.p2:19:1.000
chr1	228703102	228703216	reg1011360.p1	9.688	+	TSC_hg19_v1_chr1_+_228675088 NM_001010858 BC012758	-28084	+	AK091220 NM_175055 BC100855 BC100856 BC100857 BC100858 BC137467 BC137468	-57352	+	AB590632 BC082269 BC001193 NM_033445 AK311930 TSC_hg19_v1_chr1_-_228645575	-57613	-	AK055963 TSC_hg19_v1_chr1_+_228783500	80272	+	TSC_hg19_v1_chr1_+_228870806 NM_021205 AF211836	167685	+	TSC_hg19_v1_chr1_+_228871199 AB209511 AK289971 BC040076 AF282258 AB074878 AB051826 AF378087	168140	+	NM_001010858|RNF187|149603|ring finger protein 187##BC012758|RNF187|149603|ring finger protein 187##AK091220|HIST3H2BB|128312|histone cluster 3, H2bb##NM_175055|HIST3H2BB|128312|histone cluster 3, H2bb##BC100855|HIST3H2BB|128312|histone cluster 3, H2bb##BC100856|HIST3H2BB|128312|histone cluster 3, H2bb##BC100857|HIST3H2BB|128312|histone cluster 3, H2bb##BC100858|HIST3H2BB|128312|histone cluster 3, H2bb##BC137467|HIST3H2BB|128312|histone cluster 3, H2bb##BC137468|HIST3H2BB|128312|histone cluster 3, H2bb##BC082269|HIST3H2A|92815|histone cluster 3, H2a##BC001193|HIST3H2A|92815|histone cluster 3, H2a##NM_033445|HIST3H2A|92815|histone cluster 3, H2a##AK311930|HIST3H2A|92815|histone cluster 3, H2a##AK055963|DUSP5P|574029|dual specificity phosphatase 5 pseudogene##NM_021205|RHOU|58480|ras homolog gene family, member U##AF211836|RHOU|58480|ras homolog gene family, member U##AB209511|RHOU|58480|ras homolog gene family, member U##AK289971|RHOU|58480|ras homolog gene family, member U##BC040076|RHOU|58480|ras homolog gene family, member U##AF282258|RHOU|58480|ras homolog gene family, member U##AB074878|RHOU|58480|ras homolog gene family, member U##AB051826|RHOU|58480|ras homolog gene family, member U##AF378087|RHOU|58480|ras homolog gene family, member U	1.162104	CTCF.p2:8:0.980
chr12	39981169	39981280	reg1010956.p1	9.687	+	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	-144225	-	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	-681841	-	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-1270599	+	AK314254 NM_005164	32618	-	BC038754 NM_001031748 BC048120 AK097445	38771	+	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	518465	-	AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13	0.900676	CTCF.p2:8:0.901
chr16	24053492	24053626	reg1012561.p2	9.687	+	AB587511 EU832791 GQ129253 TSC_hg19_v1_chr16_+_23847512	-206053	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	-206164	+	TSC_hg19_v1_chr16_+_23847321 BC036472	-206227	+	BC037899 NM_006539 AK095553	213315	+	AK055453 TSC_hg19_v1_chr16_+_24267474	213915	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	214139	+	EU832791|PRKCB|5579|protein kinase C, beta##GQ129253|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	0.995945	CTCF.p2:-18:0.996
chr7	44347045	44347163	reg1010215.p1	9.686	+	TSC_hg19_v1_chr7_+_44240639 BC007319 AF091079 U95735 DQ890653 DQ893833 CU675611 AB451317 AB451447 BT007078 CR456989 CR542008	-106418	+	TSC_hg19_v1_chr7_+_44240631 AK223488	-106484	+	TSC_hg19_v1_chr7_+_44240576 NM_006555 AK312622	-106526	+	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	18187	-	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	183177	-	AY437865 AY515256 FJ481111 TSC_hg19_v1_chr7_-_44580901 BC117178 BC143731 BC143756 AF192522 AF192523 NM_001101648 NM_013389	233781	-	BC007319|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AF091079|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##U95735|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ890653|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ893833|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451317|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451447|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BT007078|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR456989|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR542008|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK223488|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##NM_006555|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK312622|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3##AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	0.0	
chr17	1998411	1998547	reg1014121.p1	9.685	+	DQ187313 NM_001098202	-38922	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-40081	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-53171	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	208333	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	208561	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	208773	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.0	
chr20	32657759	32657895	reg1010730.p3	9.685	+	AK291079 TSC_hg19_v1_chr20_+_32581883 AK291054	-75944	+	TSC_hg19_v1_chr20_+_32581743 AF148457 AK222915 L38696 BC105018	-76032	+	TSC_hg19_v1_chr20_+_32581716 BC103753 AK299766	-76123	+	AB451237 AB451362 BT009795 CR456734 CU674464 AB590122 TSC_hg19_v1_chr20_-_32700021 AB208966 M29536 BC107588 BC000934 AK313025 BC000461	42169	-	TSC_hg19_v1_chr20_-_32700082 NM_003908	42258	-	NM_001672 BC104238 BC104239	190347	+	AK291079|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK291054|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AF148457|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK222915|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##L38696|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC105018|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC103753|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK299766|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AB451237|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB451362|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BT009795|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##CR456734|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB208966|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##M29536|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC107588|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000934|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AK313025|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000461|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##NM_003908|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##NM_001672|ASIP|434|agouti signaling protein##BC104238|ASIP|434|agouti signaling protein##BC104239|ASIP|434|agouti signaling protein	0.99712	CTCF.p2:5:0.997
chr5	141531579	141531699	reg1011970.p1	9.685	+	TSC_hg19_v1_chr5_+_141488389 AB097010 AB097037 BC004317	-43229	+	AK075524 TSC_hg19_v1_chr5_+_141488384	-43255	+	TSC_hg19_v1_chr5_+_141488343 NM_030571 AK315481 AY192728	-43291	+	BC125095 BC125096 TSC_hg19_v1_chr5_-_141704555 AF227516 AF227517	172881	-	TSC_hg19_v1_chr5_-_141704587 AK096464 NM_001127496 NM_030964	172995	-	S67291 S67292 S67294 AB528663 X65778 X65779 M13361 NM_033137 X51943	462069	-	AB097010|NDFIP1|80762|Nedd4 family interacting protein 1##AB097037|NDFIP1|80762|Nedd4 family interacting protein 1##BC004317|NDFIP1|80762|Nedd4 family interacting protein 1##AK075524|NDFIP1|80762|Nedd4 family interacting protein 1##NM_030571|NDFIP1|80762|Nedd4 family interacting protein 1##AK315481|NDFIP1|80762|Nedd4 family interacting protein 1##AY192728|NDFIP1|80762|Nedd4 family interacting protein 1##BC125095|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125096|SPRY4|81848|sprouty homolog 4 (Drosophila)##AF227516|SPRY4|81848|sprouty homolog 4 (Drosophila)##AK096464|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_001127496|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_030964|SPRY4|81848|sprouty homolog 4 (Drosophila)##S67291|FGF1|2246|fibroblast growth factor 1 (acidic)##S67292|FGF1|2246|fibroblast growth factor 1 (acidic)##S67294|FGF1|2246|fibroblast growth factor 1 (acidic)##X65778|FGF1|2246|fibroblast growth factor 1 (acidic)##X65779|FGF1|2246|fibroblast growth factor 1 (acidic)##M13361|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)##X51943|FGF1|2246|fibroblast growth factor 1 (acidic)	0.826472	CTCF.p2:-18:0.826
chr4	40552994	40553138	reg1012537.p1	9.684	+	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	-35108	-	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	-36482	-	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	-215621	+	TSC_hg19_v1_chr4_-_40631882 BC034402 BC071585 NM_001098634	78799	-	AK304206 TSC_hg19_v1_chr4_-_40632775	79641	-	BC042401 NM_024677 BC036568 AK024063	198880	+	AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC034402|RBM47|54502|RNA binding motif protein 47##BC071585|RBM47|54502|RNA binding motif protein 47##NM_001098634|RBM47|54502|RNA binding motif protein 47##AK304206|RBM47|54502|RNA binding motif protein 47##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7	0.925648	CTCF.p2:-16:0.926
chr10	102268576	102268700	reg1014054.p1	9.683	+	Y11094 NM_003393 AB073637	-45833	+	AK023036 TSC_hg19_v1_chr10_+_102133657	-135010	+	TSC_hg19_v1_chr10_+_102123601 AF113690	-145126	+	AF274863 BX640914 BC044569 BC053949 BC034946 NM_015490 AK289975 BC071580 AK294551	11012	-	CR533490 DQ893286 DQ896618 EU831639 EU831723 TSC_hg19_v1_chr10_-_102289622 AF044958 AK289579 BC000466 BC019276	20977	-	AF077028 AK293081 AK304277 TSC_hg19_v1_chr10_-_102289637 AF115968 AL080056 NM_005004 AK295867	20998	-	Y11094|WNT8B|7479|wingless-type MMTV integration site family, member 8B##NM_003393|WNT8B|7479|wingless-type MMTV integration site family, member 8B##AB073637|WNT8B|7479|wingless-type MMTV integration site family, member 8B##AK023036|LINC00263|90271|long intergenic non-protein coding RNA 263##AF274863|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BX640914|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC044569|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC053949|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC034946|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##NM_015490|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##AK289975|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC071580|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##AK294551|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##CR533490|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##DQ893286|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##DQ896618|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##EU831639|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##EU831723|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF044958|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AK289579|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##BC000466|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##BC019276|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF077028|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF115968|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AL080056|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##NM_005004|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa	0.945682	CTCF.p2:14:0.946
chr12	109278324	109278447	reg1012762.p1	9.683	+	NM_001917 AX741655 AX741656 AX741658 AX776478 AX776479 AX786386 AK312995 BX538210 BC029057 BC074770	-4465	+	TSC_hg19_v1_chr12_-_109251360 BC062341 NM_001161330 NM_018984	-26963	-	AB072355 AB072356 TSC_hg19_v1_chr12_-_109251307	-27095	-	BC033587 NM_018711 TSC_hg19_v1_chr12_-_109458878	180476	-	TSC_hg19_v1_chr12_+_109490413 NM_032663 BC004868 AJ586136 CU678780 DQ893401 DQ896783	212039	+	BC070489 TSC_hg19_v1_chr12_-_109531278 AY754389 AK309062 NM_001001655 NM_001145374 NM_001145375 NM_001205179 NM_001205180	252896	-	NM_001917|DAO|1610|D-amino-acid oxidase##AX741655|DAO|1610|D-amino-acid oxidase##AX741656|DAO|1610|D-amino-acid oxidase##AX741658|DAO|1610|D-amino-acid oxidase##AX776478|DAO|1610|D-amino-acid oxidase##AX776479|DAO|1610|D-amino-acid oxidase##AX786386|DAO|1610|D-amino-acid oxidase##AK312995|DAO|1610|D-amino-acid oxidase##BX538210|DAO|1610|D-amino-acid oxidase##BC029057|DAO|1610|D-amino-acid oxidase##BC074770|DAO|1610|D-amino-acid oxidase##BC062341|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161330|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_018984|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072355|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072356|SSH1|54434|slingshot homolog 1 (Drosophila)##BC033587|SVOP|55530|SV2 related protein homolog (rat)##NM_018711|SVOP|55530|SV2 related protein homolog (rat)##NM_032663|USP30|84749|ubiquitin specific peptidase 30##BC004868|USP30|84749|ubiquitin specific peptidase 30##AJ586136|USP30|84749|ubiquitin specific peptidase 30##DQ893401|USP30|84749|ubiquitin specific peptidase 30##DQ896783|USP30|84749|ubiquitin specific peptidase 30##BC070489|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##AY754389|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##AK309062|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001001655|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001145374|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001145375|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001205179|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001205180|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)	1.974138	CTCF.p2:3:0.998	CTCF.p2:82:0.976
chr3	127293939	127294061	reg1013149.p1	9.682	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	-382006	+	AB385178 NM_032242 X87832	-586560	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-870923	+	AB037108 NM_016372	5279	-	TSC_hg19_v1_chr3_-_127309338 BC017058	15344	-	BC050711 NM_001136053 AF289568 TSC_hg19_v1_chr3_-_127309565 NM_001142646	15533	-	AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC017058|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC050711|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001136053|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##AF289568|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001142646|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	0.118787	
chr6_mcf_hap5	2899011	2899128	reg1014164.p1	9.682	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.44778	CTCF.p2:-8:0.429
chr1	16689964	16690088	reg1011496.p2	9.681	+	TSC_hg19_v1_chr1_-_16678969 BC063864 NM_018994 AK055598 BC043410	-11078	-	TSC_hg19_v1_chr1_-_16678922 AK310671	-11108	-	NM_030907	-126368	-	NM_001114600 NM_015609 BC023988 TSC_hg19_v1_chr1_+_16693726 BX640985 AJ295987 AB097042 AB097043 AB097046 AK297926 AK298576 AK308787 AL050028 AK316205 BC065538 AB097044 AB097045 BC010631	3645	+	AK128106 BC022039 AK311614 AY327405 NM_198546	73876	-	NM_001145277 NM_001145278 NM_018090 TSC_hg19_v1_chr1_+_16767200	77158	+	BC063864|FBXO42|54455|F-box protein 42##NM_018994|FBXO42|54455|F-box protein 42##AK055598|FBXO42|54455|F-box protein 42##BC043410|FBXO42|54455|F-box protein 42##AK310671|FBXO42|54455|F-box protein 42##NM_030907|RSG1|79363|REM2 and RAB-like small GTPase 1##NM_001114600|C1orf144|26099|chromosome 1 open reading frame 144##NM_015609|C1orf144|26099|chromosome 1 open reading frame 144##BC023988|C1orf144|26099|chromosome 1 open reading frame 144##BX640985|C1orf144|26099|chromosome 1 open reading frame 144##AJ295987|C1orf144|26099|chromosome 1 open reading frame 144##AB097042|C1orf144|26099|chromosome 1 open reading frame 144##AB097043|C1orf144|26099|chromosome 1 open reading frame 144##AB097046|C1orf144|26099|chromosome 1 open reading frame 144##AK297926|C1orf144|26099|chromosome 1 open reading frame 144##AK298576|C1orf144|26099|chromosome 1 open reading frame 144##AK308787|C1orf144|26099|chromosome 1 open reading frame 144##AL050028|C1orf144|26099|chromosome 1 open reading frame 144##AK316205|C1orf144|26099|chromosome 1 open reading frame 144##BC065538|C1orf144|26099|chromosome 1 open reading frame 144##AB097044|C1orf144|26099|chromosome 1 open reading frame 144##AB097045|C1orf144|26099|chromosome 1 open reading frame 144##BC010631|C1orf144|26099|chromosome 1 open reading frame 144##AK128106|SPATA21|374955|spermatogenesis associated 21##BC022039|SPATA21|374955|spermatogenesis associated 21##AK311614|SPATA21|374955|spermatogenesis associated 21##AY327405|SPATA21|374955|spermatogenesis associated 21##NM_198546|SPATA21|374955|spermatogenesis associated 21##NM_001145277|NECAP2|55707|NECAP endocytosis associated 2##NM_001145278|NECAP2|55707|NECAP endocytosis associated 2##NM_018090|NECAP2|55707|NECAP endocytosis associated 2	0.96228	CTCF.p2:15:0.962
chr12	108964657	108964799	reg1014806.p1	9.680	+	NM_014301 NM_213595 TSC_hg19_v1_chr12_+_108956366 AK022758 AK297862 AY009127 AY009128 EU329002 BC011906 AK293202 AM393134 BC061903 AK000574 AB528752 CU687510 DQ896294 EU176420	-8383	+	NM_014706 BC015627 BC041638	-9559	-	TSC_hg19_v1_chr12_-_108954952 AK290209	-9764	-	AK075501 BC096825 AK301202 TSC_hg19_v1_chr12_-_108991824	27075	-	AK295288 TSC_hg19_v1_chr12_-_108991834	27105	-	TSC_hg19_v1_chr12_-_108991861 AK097290	27124	-	NM_014301|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##NM_213595|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##AK022758|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##AK297862|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##AY009127|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##AY009128|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##EU329002|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##BC011906|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##AK293202|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##BC061903|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##AK000574|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##DQ896294|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##EU176420|ISCU|23479|iron-sulfur cluster scaffold homolog (E. coli)##NM_014706|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC015627|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC041638|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK290209|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK075501|TMEM119|338773|transmembrane protein 119##BC096825|TMEM119|338773|transmembrane protein 119##AK301202|TMEM119|338773|transmembrane protein 119##AK295288|TMEM119|338773|transmembrane protein 119##AK097290|TMEM119|338773|transmembrane protein 119	0.351826	CTCF.p2:-7:0.352
chr12	81522858	81522958	reg1011964.p2	9.680	+	TSC_hg19_v1_chr12_+_81471857 BC009317 BC015769 NM_024560 AK025616 AX764482	-51050	+	TSC_hg19_v1_chr12_-_81331487 AB528898 CR407680 BC099921 AK315321 BC046926 BC062332 BC118609 BC122561 AF087693 AF173081 NM_004664	-191318	-	TSC_hg19_v1_chr12_-_81331470 AK309256	-191441	-	AK123372 AK296380 NM_001220479 NM_001220480	240251	-	AK294505 AK297372 AK299853 NM_001220477 NM_001220478	469146	-	BC104912 BC143485 NM_001220475 NM_001220476 AK126971 TSC_hg19_v1_chr12_-_82152435 AB210009 NM_001220473 NM_001220474	629463	-	BC009317|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##BC015769|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##NM_024560|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AK025616|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AX764482|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)##BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)##AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)##BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)##BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)##BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)##BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)##AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)##AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)##NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)##AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)##AK123372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK296380|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220479|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220480|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC104912|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC143485|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220475|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220476|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK126971|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AB210009|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220473|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220474|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	0.201167	CTCF.p2:-5:0.201
chr17	37395953	37396075	reg1012465.p1	9.680	+	BC109231 AJ608762 AK131500 NM_198993	-14035	-	TSC_hg19_v1_chr17_+_37356579 BC000530 S56985 BC013016	-39433	+	TSC_hg19_v1_chr17_+_37356573 AK223082 BC062709 BX537435	-39442	+	TSC_hg19_v1_chr17_-_37557855 BC007557 DQ223959 AK312612 AK291844 AK123048 NM_001184906 NM_032875	161886	-	CU687400 BC131783 AF055994 BC006517 Y13467 BC060758 TSC_hg19_v1_chr17_-_37607519 AK299789 AK314185 NM_004774	211407	-	TSC_hg19_v1_chr17_+_37617760 NM_015083 NM_016507 AK302645	221738	+	BC109231|STAC2|342667|SH3 and cysteine rich domain 2##AJ608762|STAC2|342667|SH3 and cysteine rich domain 2##AK131500|STAC2|342667|SH3 and cysteine rich domain 2##NM_198993|STAC2|342667|SH3 and cysteine rich domain 2##BC000530|RPL19|6143|ribosomal protein L19##S56985|RPL19|6143|ribosomal protein L19##BC013016|RPL19|6143|ribosomal protein L19##AK223082|RPL19|6143|ribosomal protein L19##BC062709|RPL19|6143|ribosomal protein L19##BX537435|RPL19|6143|ribosomal protein L19##BC007557|FBXL20|84961|F-box and leucine-rich repeat protein 20##DQ223959|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK312612|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK291844|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK123048|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_001184906|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_032875|FBXL20|84961|F-box and leucine-rich repeat protein 20##BC131783|MED1|5469|mediator complex subunit 1##AF055994|MED1|5469|mediator complex subunit 1##BC006517|MED1|5469|mediator complex subunit 1##Y13467|MED1|5469|mediator complex subunit 1##BC060758|MED1|5469|mediator complex subunit 1##AK299789|MED1|5469|mediator complex subunit 1##AK314185|MED1|5469|mediator complex subunit 1##NM_004774|MED1|5469|mediator complex subunit 1##NM_015083|CDK12|51755|cyclin-dependent kinase 12##NM_016507|CDK12|51755|cyclin-dependent kinase 12##AK302645|CDK12|51755|cyclin-dependent kinase 12	0.089131	
chr3	71119125	71119259	reg1013257.p1	9.680	+	TSC_hg19_v1_chr3_-_71114076 AK074569 NM_001244813	-4996	-	TSC_hg19_v1_chr3_+_70048883 BC015590	-1070304	+	NM_000248 NM_001184968 NM_198158 NM_198178 Z29678 BC012503 BC065243 BC026961 GU355676	-1133381	+	TSC_hg19_v1_chr3_-_71179732 AK027264	60531	-	AK297649 TSC_hg19_v1_chr3_-_71179738 BX647682	60548	-	TSC_hg19_v1_chr3_-_71180072 NM_001244815	60887	-	AK074569|FOXP1|27086|forkhead box P1##NM_001244813|FOXP1|27086|forkhead box P1##NM_000248|MITF|4286|microphthalmia-associated transcription factor##NM_001184968|MITF|4286|microphthalmia-associated transcription factor##NM_198158|MITF|4286|microphthalmia-associated transcription factor##NM_198178|MITF|4286|microphthalmia-associated transcription factor##Z29678|MITF|4286|microphthalmia-associated transcription factor##BC012503|MITF|4286|microphthalmia-associated transcription factor##BC065243|MITF|4286|microphthalmia-associated transcription factor##BC026961|MITF|4286|microphthalmia-associated transcription factor##GU355676|MITF|4286|microphthalmia-associated transcription factor##AK027264|FOXP1|27086|forkhead box P1##AK297649|FOXP1|27086|forkhead box P1##BX647682|FOXP1|27086|forkhead box P1##NM_001244815|FOXP1|27086|forkhead box P1	1.017965	CTCF.p2:5:0.998
chr4	125033130	125033247	reg1013138.p1	9.680	+	AK026960 BC063856 NM_005841	-712515	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-715232	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-1188936	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	600626	-	NM_024582	1204378	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	3520951	+	AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	0.157887	
chr4	75236692	75236815	reg1012775.p1	9.680	+	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	-5813	+	AK289455 BC127938 BC127939 DQ235269 AY358920 NM_001013442 DQ235264 DQ235265 DQ235266 DQ235267 DQ235268	-62534	+	TSC_hg19_v1_chr4_+_75023834 AX794782 BC037529 NM_001144978 BC041943 AX794779	-212888	+	BC009799 M30704 NM_001657	74099	+	BC009799 M30704 NM_001657	243875	+	BC011618 S55606 AB109441 NM_001729	483030	-	AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin##AK289455|EPGN|255324|epithelial mitogen homolog (mouse)##BC127938|EPGN|255324|epithelial mitogen homolog (mouse)##BC127939|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235269|EPGN|255324|epithelial mitogen homolog (mouse)##AY358920|EPGN|255324|epithelial mitogen homolog (mouse)##NM_001013442|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235264|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235265|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235266|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235267|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235268|EPGN|255324|epithelial mitogen homolog (mouse)##BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin	0.908229	CTCF.p2:0:0.908
chr9	80073043	80073188	reg1011939.p1	9.680	+	AK027023 TSC_hg19_v1_chr9_+_79968352	-104767	+	TSC_hg19_v1_chr9_+_79792474 AB054005	-280607	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	-280776	+	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	190116	-	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	573069	-	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	777915	+	AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa	0.989249	CTCF.p2:-11:0.989
chr2	89218983	89219112	reg1011998.p2	9.679	+	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	-33957	+	S49006 TSC_hg19_v1_chr2_-_89165772	-53335	-	BX648045 TSC_hg19_v1_chr2_+_89065391 AL137717 BC031698	-153646	+	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	73366	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	223542	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	294186	-	BX648045|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AL137717|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##BC031698|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##BC070336|IGKC|3514|immunoglobulin kappa constant	0.988465	CTCF.p2:4:0.988
chr3	98742589	98742709	reg1010453.p1	9.679	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-122157	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-291062	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-291404	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	614801	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	794096	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	852342	-	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like	0.64018	CTCF.p2:-23:0.640
chr12	89923622	89923751	reg1011150.p1	9.678	+	AK297677 NM_001199781 NM_001199782 NM_172240	-3648	-	CU693124 TSC_hg19_v1_chr12_-_89919778 BX647258 AK074772 AK295596 BC026080 EF011619	-3926	-	TSC_hg19_v1_chr12_-_89919208 AK123106 NM_001199777	-4424	-	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	126165	-	TSC_hg19_v1_chr12_+_90102640 BC040326	179001	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	179859	+	AK297677|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199781|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199782|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_172240|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BX647258|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##AK074772|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK295596|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BC026080|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##EF011619|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK123106|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##NM_001199777|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC040326|LOC338758|338758|uncharacterized LOC338758##BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758	0.913691	CTCF.p2:25:0.914
chr13	91786612	91786731	reg1012001.p1	9.678	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3461802	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5413232	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7330171	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	264233	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	2092756	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3345155	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.999332	CTCF.p2:-15:0.999
chr4	15807360	15807484	reg1012209.p1	9.678	+	TSC_hg19_v1_chr4_+_15779950 AK303169 NM_001775 D84276 AK313268 M34461 BC007964 D84277 DQ893184 EU176777 AK297592	-27451	+	TSC_hg19_v1_chr4_+_15704753 AB175627 AB590680 BT019502	-102663	+	TSC_hg19_v1_chr4_+_15704695 AK312497 BC012095	-102727	+	BC003628 M60047 BC008910 BC018852 AK291307 TSC_hg19_v1_chr4_-_15939972	132538	-	NM_005130	132940	-	AF361936 CU693032 DQ892062 DQ895256 AB529223 BC025720 AB021123 AY358978 NM_031950	157382	-	AK303169|CD38|952|CD38 molecule##NM_001775|CD38|952|CD38 molecule##D84276|CD38|952|CD38 molecule##AK313268|CD38|952|CD38 molecule##M34461|CD38|952|CD38 molecule##BC007964|CD38|952|CD38 molecule##D84277|CD38|952|CD38 molecule##DQ893184|CD38|952|CD38 molecule##EU176777|CD38|952|CD38 molecule##AK297592|CD38|952|CD38 molecule##AB175627|BST1|683|bone marrow stromal cell antigen 1##BT019502|BST1|683|bone marrow stromal cell antigen 1##AK312497|BST1|683|bone marrow stromal cell antigen 1##BC012095|BST1|683|bone marrow stromal cell antigen 1##BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1##M60047|FGFBP1|9982|fibroblast growth factor binding protein 1##BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1##BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1##AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1##NM_005130|FGFBP1|9982|fibroblast growth factor binding protein 1##AF361936|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ892062|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ895256|FGFBP2|83888|fibroblast growth factor binding protein 2##BC025720|FGFBP2|83888|fibroblast growth factor binding protein 2##AB021123|FGFBP2|83888|fibroblast growth factor binding protein 2##AY358978|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_031950|FGFBP2|83888|fibroblast growth factor binding protein 2	0.993254	CTCF.p2:0:0.993
chr7	128983072	128983194	reg1012210.p1	9.678	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	-118304	+	BC009989 NM_005631	-154421	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-287928	-	TSC_hg19_v1_chr7_+_129007981 NM_001130723	24853	+	TSC_hg19_v1_chr7_+_129008062 AK025372	24955	+	AK316073 NM_001130722	32350	+	NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2##AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2	0.998486	CTCF.p2:-17:0.998
chr1	40167660	40167781	reg1012422.p2	9.677	+	TSC_hg19_v1_chr1_-_40157103 BC030827 AL136591 NM_016257 AK294412 AK312314 AK294813	-10618	-	AF331801 AY028778 BC103879 BC103880 NM_032526	-30011	-	TSC_hg19_v1_chr1_-_40105343 NM_014571	-62375	-	NM_001195007 NM_006112 NM_203456 TSC_hg19_v1_chr1_+_40204553 AK313666 BC008451 AL833576 AF104012 AF104013 AK094660 AK304694 BC107736	36818	+	AK130628 TSC_hg19_v1_chr1_+_40204563 AK293094 BC004898 AB464008 CU678794 DQ160195	36847	+	AK314586 DQ893340 DQ896660 BC030015 AB050193 AK093089 AX747914 BC072388 AY013700 NM_022120	69252	-	BC030827|HPCAL4|51440|hippocalcin like 4##AL136591|HPCAL4|51440|hippocalcin like 4##NM_016257|HPCAL4|51440|hippocalcin like 4##AK294412|HPCAL4|51440|hippocalcin like 4##AK312314|HPCAL4|51440|hippocalcin like 4##AK294813|HPCAL4|51440|hippocalcin like 4##AF331801|NT5C1A|84618|5'-nucleotidase, cytosolic IA##AY028778|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC103879|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC103880|NT5C1A|84618|5'-nucleotidase, cytosolic IA##NM_032526|NT5C1A|84618|5'-nucleotidase, cytosolic IA##NM_014571|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##NM_001195007|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_006112|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_203456|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK313666|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC008451|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AL833576|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104012|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104013|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK094660|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK304694|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC107736|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK130628|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK293094|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC004898|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##DQ160195|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK314586|OXCT2|64064|3-oxoacid CoA transferase 2##DQ893340|OXCT2|64064|3-oxoacid CoA transferase 2##DQ896660|OXCT2|64064|3-oxoacid CoA transferase 2##BC030015|OXCT2|64064|3-oxoacid CoA transferase 2##AB050193|OXCT2|64064|3-oxoacid CoA transferase 2##AK093089|OXCT2|64064|3-oxoacid CoA transferase 2##BC072388|OXCT2|64064|3-oxoacid CoA transferase 2##AY013700|OXCT2|64064|3-oxoacid CoA transferase 2##NM_022120|OXCT2|64064|3-oxoacid CoA transferase 2	0.962595	CTCF.p2:-8:0.963
chr11	3862921	3863047	reg1011513.p1	9.676	+	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	-785	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	-829	-	NM_014489 AF159615	-33210	+	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	13945	+	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	253005	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	253082	+	X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##NM_014489|PGAP2|27315|post-GPI attachment to proteins 2##AF159615|PGAP2|27315|post-GPI attachment to proteins 2##NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1	0.580208	CTCF.p2:-16:0.580
chr14	52445911	52446061	reg1012321.p1	9.676	+	TSC_hg19_v1_chr14_+_52327416 BC020774	-118550	+	TSC_hg19_v1_chr14_+_52327387 AL832878	-118594	+	AK001024 AK311334 TSC_hg19_v1_chr14_+_52327363	-118622	+	AF087877 AF100755 AF151857 DQ525179 NM_016039 TSC_hg19_v1_chr14_+_52456231 AK312004 BC001722	10268	+	TSC_hg19_v1_chr14_+_52456323 EU446806 AB463506 AY817175	10353	+	AJ223500 D86425 AB385187 CU690132 TSC_hg19_v1_chr14_-_52535721	89736	-	BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AL832878|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AF087877|C14orf166|51637|chromosome 14 open reading frame 166##AF100755|C14orf166|51637|chromosome 14 open reading frame 166##AF151857|C14orf166|51637|chromosome 14 open reading frame 166##DQ525179|C14orf166|51637|chromosome 14 open reading frame 166##NM_016039|C14orf166|51637|chromosome 14 open reading frame 166##AK312004|C14orf166|51637|chromosome 14 open reading frame 166##BC001722|C14orf166|51637|chromosome 14 open reading frame 166##EU446806|C14orf166|51637|chromosome 14 open reading frame 166##AY817175|C14orf166|51637|chromosome 14 open reading frame 166##AJ223500|NID2|22795|nidogen 2 (osteonidogen)##D86425|NID2|22795|nidogen 2 (osteonidogen)	0.999698	CTCF.p2:15:1.000
chr17	34557214	34557354	reg1014406.p1	9.676	+	AY766447 AY766449 AY766450 AY766451 AY766452 AY766453 AY766454 AY766455 AY766456 AY766457 AY766458 BC070310 BC092445 NM_001001435 NM_207007 BC071718 BC130456 BC130458 BC144393 BC144394 HQ258694	-18782	+	D63785 BT006783 BC146914 BC146919 BC147008 BC147013 BC007783 X52149 BC027888 BC063472 NM_001001437 NM_021006 BC107710	-33179	-	BC033670 AK301823 BC071680 AK225985 AK292257 NM_001001417	-53334	-	BC033670 AL136860 AK301823 BC071680 AK225985 AK292308 NM_001001418	34710	-	D63785 BT006783 BC146914 BC146919 BC147008 BC147013 BC007783 X52149 BC027888 BC063472 NM_001001437 NM_021006 BC107710	68395	-	AY766447 AY766449 AY766450 AY766455 AY766456 BC070310 NM_001001435 NM_207007 BC071718 BC130456 BC130458 BC144393 BC144394 HQ258694	82784	+	AY766447|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766449|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766450|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766451|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766452|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766453|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766454|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766455|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766457|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC070310|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC092445|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_001001435|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_207007|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##BC130456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC130458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144393|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144394|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##HQ258694|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BT006783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC146914|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC146919|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147008|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147013|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC007783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##X52149|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC027888|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC063472|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_001001437|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_021006|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC107710|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK292257|TBC1D3B|414059|TBC1 domain family, member 3B##NM_001001417|TBC1D3B|414059|TBC1 domain family, member 3B##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK292308|TBC1D3C|414060|TBC1 domain family, member 3C##NM_001001418|TBC1D3C|414060|TBC1 domain family, member 3C##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BT006783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC146914|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC146919|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147008|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147013|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC007783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##X52149|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC027888|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC063472|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_001001437|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_021006|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC107710|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##AY766447|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766449|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766450|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766455|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC070310|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_001001435|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_207007|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##BC130456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC130458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144393|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144394|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##HQ258694|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2	0.0	
chr2	218899582	218899707	reg1014005.p1	9.675	+	TSC_hg19_v1_chr2_-_218867719 AK309785	-31921	-	AK001785 TSC_hg19_v1_chr2_-_218843551	-56098	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	-90863	-	NM_198483	34093	+	U11872 NM_001168298	90360	+	NM_001557 U11874 L19593 U11875 BC037961 AK290906 AK312664	91145	+	AK309785|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##NM_198483|RUFY4|285180|RUN and FYVE domain containing 4##U11872|CXCR2|3579|chemokine (C-X-C motif) receptor 2##NM_001168298|CXCR2|3579|chemokine (C-X-C motif) receptor 2##NM_001557|CXCR2|3579|chemokine (C-X-C motif) receptor 2##U11874|CXCR2|3579|chemokine (C-X-C motif) receptor 2##L19593|CXCR2|3579|chemokine (C-X-C motif) receptor 2##U11875|CXCR2|3579|chemokine (C-X-C motif) receptor 2##BC037961|CXCR2|3579|chemokine (C-X-C motif) receptor 2##AK290906|CXCR2|3579|chemokine (C-X-C motif) receptor 2##AK312664|CXCR2|3579|chemokine (C-X-C motif) receptor 2	1.014205	CTCF.p2:-3:0.999
chr2	217148379	217148510	reg1014501.p1	9.674	+	TSC_hg19_v1_chr2_+_216986829 AK026166	-161577	+	TSC_hg19_v1_chr2_+_216974124 J04977 M30938 AK290740 BC095442 BC019027 AB489155 CU676354 DQ892660 DQ895925	-174305	+	TSC_hg19_v1_chr2_+_216974112 AK222603	-174335	+	TSC_hg19_v1_chr2_-_217236666 AB037820 NM_020814	88263	-	NM_014140 TSC_hg19_v1_chr2_+_217277188 AK023780	128754	+	TSC_hg19_v1_chr2_+_217277487 NM_001127207 AF432223 BC043341	129034	+	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##J04977|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##M30938|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK290740|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC095442|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC019027|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ892660|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ895925|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK222603|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AB037820|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_020814|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_014140|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AK023780|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##NM_001127207|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AF432223|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##BC043341|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	0.759557	CTCF.p2:9:0.760
chr2	75539202	75539364	reg1012284.p1	9.674	+	AK289765 NM_001058 NM_015727	-112655	-	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-353498	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-477032	-	BC016157 TSC_hg19_v1_chr2_-_75788066	248764	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	248807	-	AK023453 NM_032181	257564	-	AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A	0.0	
chr6	47015411	47015545	reg1014824.p1	9.674	+	CR627234 BC104214 BC104215 AK026337 AK225460 AB045123 NM_025048 NM_153840 AK095348	-5440	-	AY498875 AL050295 NM_015234	-92875	-	AL832125 AB018301 AK289503 AK092043 AX747330 NM_001098518	-125812	-	TSC_hg19_v1_chr6_-_47253972 BC010241	238504	-	TSC_hg19_v1_chr6_-_47254146 AJ420531	238703	-	AF068868 BT007420 DQ890769 DQ893930 AB590269 BC017730 TSC_hg19_v1_chr6_-_47277283	261786	-	CR627234|GPR110|266977|G protein-coupled receptor 110##BC104214|GPR110|266977|G protein-coupled receptor 110##BC104215|GPR110|266977|G protein-coupled receptor 110##AK026337|GPR110|266977|G protein-coupled receptor 110##AK225460|GPR110|266977|G protein-coupled receptor 110##AB045123|GPR110|266977|G protein-coupled receptor 110##NM_025048|GPR110|266977|G protein-coupled receptor 110##NM_153840|GPR110|266977|G protein-coupled receptor 110##AK095348|GPR110|266977|G protein-coupled receptor 110##AY498875|GPR116|221395|G protein-coupled receptor 116##AL050295|GPR116|221395|G protein-coupled receptor 116##NM_015234|GPR116|221395|G protein-coupled receptor 116##AL832125|GPR116|221395|G protein-coupled receptor 116##AB018301|GPR116|221395|G protein-coupled receptor 116##AK289503|GPR116|221395|G protein-coupled receptor 116##AK092043|GPR116|221395|G protein-coupled receptor 116##NM_001098518|GPR116|221395|G protein-coupled receptor 116##BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AJ420531|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AF068868|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##BT007420|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##DQ890769|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##DQ893930|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##BC017730|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	0.658124	CTCF.p2:3:0.658
chr8	6698290	6698404	reg1012904.p1	9.674	+	AY534243 AY358489 AY534242 NM_207411	-5255	-	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	-132164	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	-132407	+	BC033298 BC047677 X92744 U73945 NM_005218	37136	-	M98331 BC093951 BC093953 BC069667 BC069710 BC069728 BC069769 NM_001926	85238	-	BC093959 BC112091 NM_001925 X65977	97437	-	AY534243|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY358489|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY534242|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##NM_207411|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC033298|DEFB1|1672|defensin, beta 1##BC047677|DEFB1|1672|defensin, beta 1##X92744|DEFB1|1672|defensin, beta 1##U73945|DEFB1|1672|defensin, beta 1##NM_005218|DEFB1|1672|defensin, beta 1##M98331|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093951|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093953|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069667|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069710|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069728|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069769|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##NM_001926|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093959|DEFA4|1669|defensin, alpha 4, corticostatin##BC112091|DEFA4|1669|defensin, alpha 4, corticostatin##NM_001925|DEFA4|1669|defensin, alpha 4, corticostatin##X65977|DEFA4|1669|defensin, alpha 4, corticostatin	0.991319	CTCF.p2:-9:0.991
chr17	70385311	70385413	reg1010800.p1	9.673	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-268122	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-268192	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-268203	+	AK000477 TSC_hg19_v1_chr17_-_70588944	203581	-	AF331643 TSC_hg19_v1_chr17_-_71088816	703454	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	703461	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.033713	
chr2	11586942	11587047	reg1010645.p2	9.673	+	TSC_hg19_v1_chr2_-_11484762 AB014519 NM_004850	-102249	-	AK301439 AK313402 TSC_hg19_v1_chr2_+_11295602	-291392	+	TSC_hg19_v1_chr2_+_11295592 AK001091	-291413	+	BC107740 TSC_hg19_v1_chr2_-_11606272 BC008348 BC062610 AK290413 AK293504	19250	-	TSC_hg19_v1_chr2_-_11606278 AK223407 AY083996 NM_198256	19292	-	AF245388 NM_014668	87247	+	AB014519|ROCK2|9475|Rho-associated, coiled-coil containing protein kinase 2##NM_004850|ROCK2|9475|Rho-associated, coiled-coil containing protein kinase 2##AK301439|PQLC3|130814|PQ loop repeat containing 3##AK313402|PQLC3|130814|PQ loop repeat containing 3##AK001091|PQLC3|130814|PQ loop repeat containing 3##BC107740|E2F6|1876|E2F transcription factor 6##BC008348|E2F6|1876|E2F transcription factor 6##BC062610|E2F6|1876|E2F transcription factor 6##AK290413|E2F6|1876|E2F transcription factor 6##AK293504|E2F6|1876|E2F transcription factor 6##AK223407|E2F6|1876|E2F transcription factor 6##AY083996|E2F6|1876|E2F transcription factor 6##NM_198256|E2F6|1876|E2F transcription factor 6##AF245388|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_014668|GREB1|9687|growth regulation by estrogen in breast cancer 1	0.868986	CTCF.p2:-1:0.869
chr5	168729661	168729751	reg1011424.p2	9.673	+	AB383998 AK310549 TSC_hg19_v1_chr5_-_168728144 BC142665 BC142717 AY358884 AB017169 BC098388 AB011538 BC146759 NM_003062	-1748	-	TSC_hg19_v1_chr5_-_168271862 BC023515	-457847	-	TSC_hg19_v1_chr5_-_168006609 BC013705 NM_024594	-723191	-	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	281015	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	334538	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	334594	+	AK310549|SLIT3|6586|slit homolog 3 (Drosophila)##BC142665|SLIT3|6586|slit homolog 3 (Drosophila)##BC142717|SLIT3|6586|slit homolog 3 (Drosophila)##AY358884|SLIT3|6586|slit homolog 3 (Drosophila)##AB017169|SLIT3|6586|slit homolog 3 (Drosophila)##BC098388|SLIT3|6586|slit homolog 3 (Drosophila)##AB011538|SLIT3|6586|slit homolog 3 (Drosophila)##BC146759|SLIT3|6586|slit homolog 3 (Drosophila)##NM_003062|SLIT3|6586|slit homolog 3 (Drosophila)##BC013705|PANK3|79646|pantothenate kinase 3##NM_024594|PANK3|79646|pantothenate kinase 3##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2	0.998612	CTCF.p2:-2:0.999
chr7	99787789	99787923	reg1014435.p1	9.673	+	TSC_hg19_v1_chr7_+_99775540 NM_012447 AK292394 BC146806 AK302693 BC047490 BC028684 AL833816 BC140932	-12293	+	AJ007798 TSC_hg19_v1_chr7_+_99775380	-12492	+	AB587513 AM392909 CU693354 DQ893325 DQ896641 AL834418 TSC_hg19_v1_chr7_-_99774981 AB209144 AK096281 BC027972 NM_152742 AY093588	-12929	-	NM_024070	29014	+	BC065200 AK290510 TSC_hg19_v1_chr7_-_99869856 BC044886 BC090867 BC033723 BC053367 NM_178831	81974	-	BC056606 NM_001004351	117468	+	NM_012447|STAG3|10734|stromal antigen 3##AK292394|STAG3|10734|stromal antigen 3##BC146806|STAG3|10734|stromal antigen 3##AK302693|STAG3|10734|stromal antigen 3##BC047490|STAG3|10734|stromal antigen 3##BC028684|STAG3|10734|stromal antigen 3##AL833816|STAG3|10734|stromal antigen 3##BC140932|STAG3|10734|stromal antigen 3##AJ007798|STAG3|10734|stromal antigen 3##AM392909|GPC2|221914|glypican 2##DQ893325|GPC2|221914|glypican 2##DQ896641|GPC2|221914|glypican 2##AL834418|GPC2|221914|glypican 2##AK096281|GPC2|221914|glypican 2##BC027972|GPC2|221914|glypican 2##NM_152742|GPC2|221914|glypican 2##AY093588|GPC2|221914|glypican 2##NM_024070|PVRIG|79037|poliovirus receptor related immunoglobulin domain containing##BC065200|GATS|352954|GATS, stromal antigen 3 opposite strand##AK290510|GATS|352954|GATS, stromal antigen 3 opposite strand##BC044886|GATS|352954|GATS, stromal antigen 3 opposite strand##BC090867|GATS|352954|GATS, stromal antigen 3 opposite strand##BC033723|GATS|352954|GATS, stromal antigen 3 opposite strand##BC053367|GATS|352954|GATS, stromal antigen 3 opposite strand##NM_178831|GATS|352954|GATS, stromal antigen 3 opposite strand##BC056606|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)##NM_001004351|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)	0.725478	CTCF.p2:-21:0.725
chr18	55899285	55899404	reg1012609.p1	9.672	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-10494	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-10541	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-10582	+	BX647796 NM_052947	396844	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	439297	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	439384	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.480757	CTCF.p2:13:0.481
chr3	127852489	127852592	reg1012214.p1	9.672	+	AB451224 AB451347 AB590226 BT007057 DQ469310 DQ891448 DQ894627 BC012886 TSC_hg19_v1_chr3_-_127842656 AB012122 AF099084 BC000519 BC002993 AF070735 AJ010058 AK222575 Y18418 AK222563 AK312290 NM_003707	-9917	-	TSC_hg19_v1_chr3_+_127771342 AB528869	-81174	+	TSC_hg19_v1_chr3_+_127771307 AF346602	-81218	+	TSC_hg19_v1_chr3_+_127872314 NM_021937	19769	+	TSC_hg19_v1_chr3_+_127872325 BC007933 AF268872	19898	+	BC050288 NM_153330	333550	-	AB451224|RUVBL1|8607|RuvB-like 1 (E. coli)##AB451347|RUVBL1|8607|RuvB-like 1 (E. coli)##BT007057|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ469310|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ891448|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ894627|RUVBL1|8607|RuvB-like 1 (E. coli)##BC012886|RUVBL1|8607|RuvB-like 1 (E. coli)##AB012122|RUVBL1|8607|RuvB-like 1 (E. coli)##AF099084|RUVBL1|8607|RuvB-like 1 (E. coli)##BC002993|RUVBL1|8607|RuvB-like 1 (E. coli)##AF070735|RUVBL1|8607|RuvB-like 1 (E. coli)##AJ010058|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222575|RUVBL1|8607|RuvB-like 1 (E. coli)##Y18418|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222563|RUVBL1|8607|RuvB-like 1 (E. coli)##AK312290|RUVBL1|8607|RuvB-like 1 (E. coli)##NM_003707|RUVBL1|8607|RuvB-like 1 (E. coli)##AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##NM_021937|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##BC007933|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AF268872|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##BC050288|DNAJB8|165721|DnaJ (Hsp40) homolog, subfamily B, member 8##NM_153330|DNAJB8|165721|DnaJ (Hsp40) homolog, subfamily B, member 8	0.792588	CTCF.p2:-2:0.793
chr7	121634742	121634868	reg1004122.p1	9.672	+	TSC_hg19_v1_chr7_+_121513214 U88967	-121584	+	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	-121644	+	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	-598391	-	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	149484	-	AY726588 BC127714 BC127715 NM_001024613 NM_001160264 BC136684 BC144367 AK300742	309784	-	BC022038 AF447589 NM_139175 AK098524	704392	-	U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase##AY726588|FEZF1|389549|FEZ family zinc finger 1##BC127714|FEZF1|389549|FEZ family zinc finger 1##BC127715|FEZF1|389549|FEZ family zinc finger 1##NM_001024613|FEZF1|389549|FEZ family zinc finger 1##NM_001160264|FEZF1|389549|FEZ family zinc finger 1##BC136684|FEZF1|389549|FEZ family zinc finger 1##BC144367|FEZF1|389549|FEZ family zinc finger 1##AK300742|FEZF1|389549|FEZ family zinc finger 1##BC022038|RNF133|168433|ring finger protein 133##AF447589|RNF133|168433|ring finger protein 133##NM_139175|RNF133|168433|ring finger protein 133##AK098524|RNF133|168433|ring finger protein 133	0.999507	CTCF.p2:-4:1.000
chr8	90730616	90730751	reg1013267.p1	9.672	+	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	-1390937	-	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	-1844424	-	AK093121 AX747937 BC117326 BC117328 NM_173538	-2852010	+	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	39347	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	39601	+	AF061326 NM_004337	183412	+	AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF061326|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_004337|OSGIN2|734|oxidative stress induced growth inhibitor family member 2	0.958335	CTCF.p2:-7:0.958
chr10	49423643	49423770	reg1012504.p1	9.671	+	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	-215885	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-595764	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	-596097	-	CR749241 NM_001018071	59220	-	TSC_hg19_v1_chr10_+_49514722 AK292523	91080	+	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	185966	+	BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##AK292523|MAPK8|5599|mitogen-activated protein kinase 8##BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8	0.964735	CTCF.p2:-12:0.965
chr15	38184092	38184212	reg1010559.p1	9.671	+	TSC_hg19_v1_chr15_-_37393466 BC050431 NM_001220482 NM_002399 BC001516 BC001844 BC007202 AK300247	-790710	-	TSC_hg19_v1_chr15_-_37392751 AK056216 NM_170674 NM_170675 NM_170676 NM_170677	-791596	-	TSC_hg19_v1_chr15_-_37392322 AK226072	-791821	-	BC029221 NM_152453	43304	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	360243	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	360870	+	BC050431|MEIS2|4212|Meis homeobox 2##NM_001220482|MEIS2|4212|Meis homeobox 2##NM_002399|MEIS2|4212|Meis homeobox 2##BC001516|MEIS2|4212|Meis homeobox 2##BC001844|MEIS2|4212|Meis homeobox 2##BC007202|MEIS2|4212|Meis homeobox 2##AK300247|MEIS2|4212|Meis homeobox 2##AK056216|MEIS2|4212|Meis homeobox 2##NM_170674|MEIS2|4212|Meis homeobox 2##NM_170675|MEIS2|4212|Meis homeobox 2##NM_170676|MEIS2|4212|Meis homeobox 2##NM_170677|MEIS2|4212|Meis homeobox 2##AK226072|MEIS2|4212|Meis homeobox 2##BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1	0.471608	CTCF.p2:-5:0.472
chr2	227667354	227667484	reg1014499.p1	9.671	+	TSC_hg19_v1_chr2_-_227664534 S62539	-2920	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	-3940	-	NM_020864 BC131727 AB040919	-1401774	+	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	33311	+	TSC_hg19_v1_chr2_-_228028922 X81053	361483	-	NM_000092	361855	-	S62539|IRS1|3667|insulin receptor substrate 1##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1##X81053|COL4A4|1286|collagen, type IV, alpha 4##NM_000092|COL4A4|1286|collagen, type IV, alpha 4	0.564578	CTCF.p2:0:0.565
chr3	52008066	52008189	reg1012193.p1	9.671	+	TSC_hg19_v1_chr3_-_52008038 AK296599 BC007234 AK075112 AK298813 BC050650 BC056411 AK298022 AK075034	-81	-	TSC_hg19_v1_chr3_-_52001462 BC003008 BC004153 BC017098 NM_020418 AK225815 AK001244 AK023993 NM_001174100 NM_033008	-6693	-	AF092441 AF176330 NM_033010	-11246	-	AK096073 NM_001146314 NM_032750	518	-	TSC_hg19_v1_chr3_+_52009079 NM_015407 AK298086 AK294015 BC002571 AY358201 AK308592 AL050015 EU832336 EU832421	965	+	NM_000666 NM_001198895 NM_001198896 NM_001198897 NM_001198898 TSC_hg19_v1_chr3_+_52017550 AK298274 BC000545 BC003023 D16307 L07548 D14524 BC014112	9313	+	AK296599|ABHD14B|84836|abhydrolase domain containing 14B##BC007234|ABHD14B|84836|abhydrolase domain containing 14B##AK075112|ABHD14B|84836|abhydrolase domain containing 14B##AK298813|ABHD14B|84836|abhydrolase domain containing 14B##BC050650|ABHD14B|84836|abhydrolase domain containing 14B##BC056411|ABHD14B|84836|abhydrolase domain containing 14B##AK298022|ABHD14B|84836|abhydrolase domain containing 14B##BC003008|PCBP4|57060|poly(rC) binding protein 4##BC004153|PCBP4|57060|poly(rC) binding protein 4##BC017098|PCBP4|57060|poly(rC) binding protein 4##NM_020418|PCBP4|57060|poly(rC) binding protein 4##AK225815|PCBP4|57060|poly(rC) binding protein 4##AK001244|PCBP4|57060|poly(rC) binding protein 4##AK023993|PCBP4|57060|poly(rC) binding protein 4##NM_001174100|PCBP4|57060|poly(rC) binding protein 4##NM_033008|PCBP4|57060|poly(rC) binding protein 4##AF092441|PCBP4|57060|poly(rC) binding protein 4##AF176330|PCBP4|57060|poly(rC) binding protein 4##NM_033010|PCBP4|57060|poly(rC) binding protein 4##AK096073|ABHD14B|84836|abhydrolase domain containing 14B##NM_001146314|ABHD14B|84836|abhydrolase domain containing 14B##NM_032750|ABHD14B|84836|abhydrolase domain containing 14B##NM_015407|ABHD14A|25864|abhydrolase domain containing 14A##AK298086|ABHD14A-ACY1|100526760|ABHD14A-ACY1 readthrough (non-protein coding)##AK294015|ABHD14A-ACY1|100526760|ABHD14A-ACY1 readthrough (non-protein coding)##BC002571|ABHD14A|25864|abhydrolase domain containing 14A##AY358201|ABHD14A|25864|abhydrolase domain containing 14A##AK308592|ABHD14A|25864|abhydrolase domain containing 14A##AL050015|ABHD14A|25864|abhydrolase domain containing 14A##EU832336|ABHD14A|25864|abhydrolase domain containing 14A##EU832421|ABHD14A|25864|abhydrolase domain containing 14A##NM_000666|ACY1|95|aminoacylase 1##NM_001198895|ACY1|95|aminoacylase 1##NM_001198896|ACY1|95|aminoacylase 1##NM_001198897|ACY1|95|aminoacylase 1##NM_001198898|ACY1|95|aminoacylase 1##AK298274|ACY1|95|aminoacylase 1##BC000545|ACY1|95|aminoacylase 1##BC003023|ACY1|95|aminoacylase 1##D16307|ACY1|95|aminoacylase 1##L07548|ACY1|95|aminoacylase 1##D14524|ACY1|95|aminoacylase 1##BC014112|ACY1|95|aminoacylase 1	0.999587	CTCF.p2:-8:1.000
chr8	101847822	101847952	reg1014365.p1	9.671	+	BC041863 TSC_hg19_v1_chr8_-_101734972	-112921	-	Y00345 TSC_hg19_v1_chr8_-_101734316 AK130523 AK303120 NM_002568	-113570	-	BC015958 BC023217 BC023520 TSC_hg19_v1_chr8_-_101734301	-113592	-	TSC_hg19_v1_chr8_-_101936525 DQ185048	88637	-	TSC_hg19_v1_chr8_-_101962797 NM_001135702	114912	-	TSC_hg19_v1_chr8_-_101963538 NM_001135700 NM_001135701	115575	-	BC041863|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##Y00345|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK130523|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK303120|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##NM_002568|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC015958|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023217|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023520|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ185048|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135702|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135700|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135701|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	0.759026	CTCF.p2:7:0.759
chr6	133120214	133120330	reg1011886.p2	9.670	+	AK124442 BC069570 AK293853 TSC_hg19_v1_chr6_-_133119740 NM_052831 AK289918	-571	-	AK292125 NM_078488 TSC_hg19_v1_chr6_-_133084603	-35677	-	BC064641 AB435062 AB435063 AB435064 AB435065 NM_001242350 HQ258282 HQ258449 AB026705 AJ132100 D89974 NM_004665 AK290908 AK298719 BC126145 BC126147 BC144064	-41271	-	TSC_hg19_v1_chr6_+_133135707 AK096147 NM_001016 D28378 X53505	15435	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	15447	+	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	442219	+	AK124442|C6orf192|116843|chromosome 6 open reading frame 192##BC069570|C6orf192|116843|chromosome 6 open reading frame 192##AK293853|C6orf192|116843|chromosome 6 open reading frame 192##NM_052831|C6orf192|116843|chromosome 6 open reading frame 192##AK289918|C6orf192|116843|chromosome 6 open reading frame 192##AK292125|VNN2|8875|vanin 2##NM_078488|VNN2|8875|vanin 2##BC064641|VNN2|8875|vanin 2##AB435062|VNN2|8875|vanin 2##AB435063|VNN2|8875|vanin 2##AB435064|VNN2|8875|vanin 2##AB435065|VNN2|8875|vanin 2##NM_001242350|VNN2|8875|vanin 2##HQ258282|VNN2|8875|vanin 2##HQ258449|VNN2|8875|vanin 2##AB026705|VNN2|8875|vanin 2##AJ132100|VNN2|8875|vanin 2##D89974|VNN2|8875|vanin 2##NM_004665|VNN2|8875|vanin 2##AK290908|VNN2|8875|vanin 2##AK298719|VNN2|8875|vanin 2##BC126145|VNN2|8875|vanin 2##BC126147|VNN2|8875|vanin 2##BC144064|VNN2|8875|vanin 2##AK096147|SNORA33|594839|small nucleolar RNA, H/ACA box 33##NM_001016|RPS12|6206|ribosomal protein S12##D28378|RPS12|6206|ribosomal protein S12##X53505|RPS12|6206|ribosomal protein S12##AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)	0.582646	CTCF.p2:3:0.583
chr8	41998258	41998409	reg1012936.p2	9.670	+	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	-88834	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-244023	-	AK026601 TSC_hg19_v1_chr8_+_41685847	-312508	+	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	12200	+	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	66755	-	AK289387 AK290575 NM_000930 NM_033011 TSC_hg19_v1_chr8_-_42065195	66861	-	U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue##AK289387|PLAT|5327|plasminogen activator, tissue##AK290575|PLAT|5327|plasminogen activator, tissue##NM_000930|PLAT|5327|plasminogen activator, tissue##NM_033011|PLAT|5327|plasminogen activator, tissue	0.0	
chr1	158763509	158763603	reg1012069.p1	9.667	+	NM_001005278	-16132	-	NM_001005185 BC146847	-27075	-	BC140743 NM_001005184	-38999	+	TSC_hg19_v1_chr1_+_158801140 BC020715 BC032319 AK290392 AK313210 M81750 NM_002432	37580	+	NM_152501 NM_198928 NM_198929 NM_198930 AY185344 AY185345 AY185346 AY185347 BC090944 AK308350 BC020822 BC073133 BC114470 BC139741	137803	+	NM_001206567 NM_005531 TSC_hg19_v1_chr1_+_158979716 AF208043 M63838 AB208989 BC017059 AF086545 AK296228 AK307957	216234	+	NM_001005278|OR6N2|81442|olfactory receptor, family 6, subfamily N, member 2##NM_001005185|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1##BC146847|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1##BC140743|OR6K6|128371|olfactory receptor, family 6, subfamily K, member 6##NM_001005184|OR6K6|128371|olfactory receptor, family 6, subfamily K, member 6##BC020715|MNDA|4332|myeloid cell nuclear differentiation antigen##BC032319|MNDA|4332|myeloid cell nuclear differentiation antigen##AK290392|MNDA|4332|myeloid cell nuclear differentiation antigen##AK313210|MNDA|4332|myeloid cell nuclear differentiation antigen##M81750|MNDA|4332|myeloid cell nuclear differentiation antigen##NM_002432|MNDA|4332|myeloid cell nuclear differentiation antigen##NM_152501|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198928|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198929|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198930|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185344|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185345|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185346|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185347|PYHIN1|149628|pyrin and HIN domain family, member 1##BC090944|PYHIN1|149628|pyrin and HIN domain family, member 1##AK308350|PYHIN1|149628|pyrin and HIN domain family, member 1##BC020822|PYHIN1|149628|pyrin and HIN domain family, member 1##BC073133|PYHIN1|149628|pyrin and HIN domain family, member 1##BC114470|PYHIN1|149628|pyrin and HIN domain family, member 1##BC139741|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_001206567|IFI16|3428|interferon, gamma-inducible protein 16##NM_005531|IFI16|3428|interferon, gamma-inducible protein 16##AF208043|IFI16|3428|interferon, gamma-inducible protein 16##M63838|IFI16|3428|interferon, gamma-inducible protein 16##AB208989|IFI16|3428|interferon, gamma-inducible protein 16##BC017059|IFI16|3428|interferon, gamma-inducible protein 16##AF086545|IFI16|3428|interferon, gamma-inducible protein 16##AK296228|IFI16|3428|interferon, gamma-inducible protein 16##AK307957|IFI16|3428|interferon, gamma-inducible protein 16	0.30712	CTCF.p2:-1:0.307
chr4	110920066	110920205	reg1014600.p1	9.667	+	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-86088	+	AK126648 NM_198506	-147650	+	NM_006583 BC128120 BC128121 BC128401	-170982	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	199650	-	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	477238	+	AK313987 TSC_hg19_v1_chr4_-_111543909	623775	-	AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK126648|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_198506|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313987|PITX2|5308|paired-like homeodomain 2	0.99835	CTCF.p2:-16:0.998
chr7	76629179	76629303	reg1013927.p1	9.667	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-372694	-	TSC_hg19_v1_chr7_-_76256148 BC017101	-373038	-	TSC_hg19_v1_chr7_+_76178675 BC078169	-450566	+	BC036053 NM_020879 BX649000 AK292491 HM370402	122705	+	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	199895	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	416477	-	BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC017101|POMZP3|22932|POM121 and ZP3 fusion##BC078169|LOC100133091|100133091|uncharacterized LOC100133091##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)	0.078749	
chr2	219260710	219260865	reg1012152.p1	9.666	+	AK307954 NM_000578 TSC_hg19_v1_chr2_+_219246995 D50402 AB209650 AK303398 AK310914 AK298667 AK311405 D50403 AK294707 BC041787 L32185 BC071165 BC033754	-13878	+	BC052750 NM_198559 CU690932	-39196	+	TSC_hg19_v1_chr2_+_219188021 AY358753 CU678300 AM393075 AM393168 BC002937 AK309308	-72750	+	NM_001206878	2273	+	AF229162 NM_021198 NM_182642 TSC_hg19_v1_chr2_+_219264577	3753	+	TSC_hg19_v1_chr2_+_219264739 BC012977 AB463546 EU446878 CU680458 AY279529	3994	+	AK307954|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##NM_000578|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##D50402|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##AB209650|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##AK303398|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##AK310914|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##AK298667|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##AK311405|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##D50403|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##AK294707|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##BC041787|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##L32185|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##BC071165|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##BC033754|SLC11A1|6556|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1##BC052750|C2orf62|375307|chromosome 2 open reading frame 62##NM_198559|C2orf62|375307|chromosome 2 open reading frame 62##AY358753|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AM393075|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AM393168|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC002937|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK309308|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##NM_001206878|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##AF229162|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##NM_021198|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##NM_182642|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##BC012977|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##EU446878|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##AY279529|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	0.128821	
chr3	119319681	119319839	reg1013920.p1	9.666	+	NM_001206960 NM_001206961 NM_015900 AK301880 AK222705 AK313519 BC035347 BC047703 U37591 AF035268 AF035269 AB527604 CU690470	-3033	+	BC063883 NM_001125 TSC_hg19_v1_chr3_+_119298606	-21195	+	TSC_hg19_v1_chr3_+_119298355 AK304560 AK291787	-21365	+	CU692240 AF204173 NM_022135 AK314819 BC044929	59592	-	TSC_hg19_v1_chr3_-_119396232 AK312143 BC105280 BC010933 L77701 NM_005694 BC108317	76486	-	TSC_hg19_v1_chr3_+_119421876 AF440403 BC035248 CR749242 NM_033364 AF497717 AK055558 BC126394 AK302699 AK309317 AK294413 AK303997 AK289914 HQ258654	102142	+	NM_001206960|PLA1A|51365|phospholipase A1 member A##NM_001206961|PLA1A|51365|phospholipase A1 member A##NM_015900|PLA1A|51365|phospholipase A1 member A##AK301880|PLA1A|51365|phospholipase A1 member A##AK222705|PLA1A|51365|phospholipase A1 member A##AK313519|PLA1A|51365|phospholipase A1 member A##BC035347|PLA1A|51365|phospholipase A1 member A##BC047703|PLA1A|51365|phospholipase A1 member A##U37591|PLA1A|51365|phospholipase A1 member A##AF035268|PLA1A|51365|phospholipase A1 member A##AF035269|PLA1A|51365|phospholipase A1 member A##BC063883|ADPRH|141|ADP-ribosylarginine hydrolase##NM_001125|ADPRH|141|ADP-ribosylarginine hydrolase##AK304560|ADPRH|141|ADP-ribosylarginine hydrolase##AK291787|ADPRH|141|ADP-ribosylarginine hydrolase##AF204173|POPDC2|64091|popeye domain containing 2##NM_022135|POPDC2|64091|popeye domain containing 2##AK314819|POPDC2|64091|popeye domain containing 2##BC044929|POPDC2|64091|popeye domain containing 2##AK312143|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC105280|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC010933|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##L77701|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_005694|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC108317|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##AF440403|C3orf15|89876|chromosome 3 open reading frame 15##BC035248|C3orf15|89876|chromosome 3 open reading frame 15##CR749242|C3orf15|89876|chromosome 3 open reading frame 15##NM_033364|C3orf15|89876|chromosome 3 open reading frame 15##AF497717|C3orf15|89876|chromosome 3 open reading frame 15##AK055558|C3orf15|89876|chromosome 3 open reading frame 15##BC126394|C3orf15|89876|chromosome 3 open reading frame 15##AK302699|C3orf15|89876|chromosome 3 open reading frame 15##AK309317|C3orf15|89876|chromosome 3 open reading frame 15##AK294413|C3orf15|89876|chromosome 3 open reading frame 15##AK303997|C3orf15|89876|chromosome 3 open reading frame 15##AK289914|C3orf15|89876|chromosome 3 open reading frame 15##HQ258654|C3orf15|89876|chromosome 3 open reading frame 15	0.751344	CTCF.p2:12:0.732
chr3	30810351	30810468	reg1011818.p2	9.666	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-162006	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-162387	+	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	-1487445	+	AL832766 NM_207359	125743	-	TSC_hg19_v1_chr3_+_31574119 AK311488	763721	+	TSC_hg19_v1_chr3_+_31574468 AK074587	764040	+	D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.996728	CTCF.p2:-6:0.997
chr8	131814959	131815107	reg1015301.p1	9.666	+	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	-359002	-	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-786150	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-786339	-	NM_001115	237801	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1101324	+	TSC_hg19_v1_chr8_+_132916379 BC108667	1101344	+	NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC108667|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	1.016951	CTCF.p2:-3:1.000
chr9	68824085	68824226	reg1013973.p1	9.666	+	TSC_hg19_v1_chr9_+_68726468 AK311167	-97653	+	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	-897339	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-2270880	+	TSC_hg19_v1_chr9_+_69065493 AK311167	241383	+	NM_001085476	378048	-	AF265442 BC069006 AK293173 NM_001085457	438399	-	AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6	0.011183	
chr1	163144713	163144831	reg1012896.p2	9.665	+	AK026775 AF113212 AF176919 AF172821 TSC_hg19_v1_chr1_-_163114163	-30718	-	TSC_hg19_v1_chr1_-_163113134 AL157502	-31618	-	EF054877 NM_001113380	-103078	+	AB528222 AF493929 AJ891044 AM393870 DQ892138 DQ895332 NM_001195303 CU688814 AF159570 BC030059 TSC_hg19_v1_chr1_-_163172703 AF030108 AB008109 AK315357 BX537427	27893	-	TSC_hg19_v1_chr1_-_163172866 NM_003617	28140	-	TSC_hg19_v1_chr1_-_163291574 BC032239	146789	-	AK026775|RGS5|8490|regulator of G-protein signaling 5##AF113212|RGS5|8490|regulator of G-protein signaling 5##AF176919|RGS5|8490|regulator of G-protein signaling 5##AF172821|RGS5|8490|regulator of G-protein signaling 5##AL157502|RGS5|8490|regulator of G-protein signaling 5##EF054877|RGS4|5999|regulator of G-protein signaling 4##NM_001113380|RGS4|5999|regulator of G-protein signaling 4##AF493929|RGS5|8490|regulator of G-protein signaling 5##AJ891044|RGS5|8490|regulator of G-protein signaling 5##AM393870|RGS5|8490|regulator of G-protein signaling 5##DQ892138|RGS5|8490|regulator of G-protein signaling 5##DQ895332|RGS5|8490|regulator of G-protein signaling 5##NM_001195303|RGS5|8490|regulator of G-protein signaling 5##AF159570|RGS5|8490|regulator of G-protein signaling 5##BC030059|RGS5|8490|regulator of G-protein signaling 5##AF030108|RGS5|8490|regulator of G-protein signaling 5##AB008109|RGS5|8490|regulator of G-protein signaling 5##AK315357|RGS5|8490|regulator of G-protein signaling 5##BX537427|RGS5|8490|regulator of G-protein signaling 5##NM_003617|RGS5|8490|regulator of G-protein signaling 5	0.920573	CTCF.p2:11:0.921
chr1	227100427	227100574	reg1014439.p1	9.665	+	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	-42220	+	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	-173562	-	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-363883	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	27446	+	TSC_hg19_v1_chr1_+_227127991 BX648860 BC005171	27475	+	TSC_hg19_v1_chr1_+_227127998 AK074693 AK092784 AK126200 AK293571 AK297735 AX747728 AK090494 AK301012 AX746479	27495	+	NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##NM_020247|ADCK3|56997|aarF domain containing kinase 3##BX648860|ADCK3|56997|aarF domain containing kinase 3##BC005171|ADCK3|56997|aarF domain containing kinase 3##AK074693|ADCK3|56997|aarF domain containing kinase 3##AK092784|ADCK3|56997|aarF domain containing kinase 3##AK126200|ADCK3|56997|aarF domain containing kinase 3##AK293571|ADCK3|56997|aarF domain containing kinase 3##AK297735|ADCK3|56997|aarF domain containing kinase 3##AK090494|ADCK3|56997|aarF domain containing kinase 3##AK301012|ADCK3|56997|aarF domain containing kinase 3	0.981244	CTCF.p2:-13:0.981
chr2	75631201	75631334	reg1012557.p2	9.665	+	AK289765 NM_001058 NM_015727	-204639	-	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-445482	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-569016	-	BC016157 TSC_hg19_v1_chr2_-_75788066	156780	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	156823	-	AK023453 NM_032181	165580	-	AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A	0.807992	CTCF.p2:3:0.808
chr4	184183155	184183265	reg1011258.p1	9.665	+	TSC_hg19_v1_chr4_+_184020431 NM_024949	-162732	+	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	-344576	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	-344680	-	NM_001111319	58716	-	NM_001185149	60368	-	TSC_hg19_v1_chr4_+_184365788 AK000043 NM_017632	182576	+	NM_024949|WWC2|80014|WW and C2 domain containing 2##NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001111319|CLDN22|53842|claudin 22##NM_001185149|CLDN24|100132463|claudin 24##AK000043|CDKN2AIP|55602|CDKN2A interacting protein##NM_017632|CDKN2AIP|55602|CDKN2A interacting protein	1.015165	CTCF.p2:5:0.996
chr6	105932708	105932837	reg1010677.p2	9.665	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-81777	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-81814	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-81926	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	601424	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	601463	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	614032	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.0	
chr6	49817377	49817528	reg1012754.p2	9.665	+	CU691610 BC038843 AK312770 NM_138733	-62477	-	BC069602 X95240 AK223380 X94323 AK303966 AK313387 AK292786 NM_001190986 NM_006061	-105341	-	AK223337 M25532 BC022011 BC107707 X95239 AY289796 AY292863 AY773479 AK292385 AY292862 NM_001142407 NM_001142408 NM_001142417 NM_001142435 NM_003296	-136181	-	BC131707 AK292497 X95237 X95238 D38451 NM_001131 NM_170609 S80310	16750	-	BC028577 NM_001205220	27356	-	DQ012023 NM_001166478	99704	-	BC038843|PGK2|5232|phosphoglycerate kinase 2##AK312770|PGK2|5232|phosphoglycerate kinase 2##NM_138733|PGK2|5232|phosphoglycerate kinase 2##BC069602|CRISP3|10321|cysteine-rich secretory protein 3##X95240|CRISP3|10321|cysteine-rich secretory protein 3##AK223380|CRISP3|10321|cysteine-rich secretory protein 3##X94323|CRISP3|10321|cysteine-rich secretory protein 3##AK303966|CRISP3|10321|cysteine-rich secretory protein 3##AK313387|CRISP3|10321|cysteine-rich secretory protein 3##AK292786|CRISP3|10321|cysteine-rich secretory protein 3##NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3##NM_006061|CRISP3|10321|cysteine-rich secretory protein 3##AK223337|CRISP2|7180|cysteine-rich secretory protein 2##M25532|CRISP2|7180|cysteine-rich secretory protein 2##BC022011|CRISP2|7180|cysteine-rich secretory protein 2##BC107707|CRISP2|7180|cysteine-rich secretory protein 2##X95239|CRISP2|7180|cysteine-rich secretory protein 2##AY289796|CRISP2|7180|cysteine-rich secretory protein 2##AY292863|CRISP2|7180|cysteine-rich secretory protein 2##AY773479|CRISP2|7180|cysteine-rich secretory protein 2##AK292385|CRISP2|7180|cysteine-rich secretory protein 2##AY292862|CRISP2|7180|cysteine-rich secretory protein 2##NM_001142407|CRISP2|7180|cysteine-rich secretory protein 2##NM_001142408|CRISP2|7180|cysteine-rich secretory protein 2##NM_001142417|CRISP2|7180|cysteine-rich secretory protein 2##NM_001142435|CRISP2|7180|cysteine-rich secretory protein 2##NM_003296|CRISP2|7180|cysteine-rich secretory protein 2##BC131707|CRISP1|167|cysteine-rich secretory protein 1##AK292497|CRISP1|167|cysteine-rich secretory protein 1##X95237|CRISP1|167|cysteine-rich secretory protein 1##X95238|CRISP1|167|cysteine-rich secretory protein 1##D38451|CRISP1|167|cysteine-rich secretory protein 1##NM_001131|CRISP1|167|cysteine-rich secretory protein 1##NM_170609|CRISP1|167|cysteine-rich secretory protein 1##S80310|CRISP1|167|cysteine-rich secretory protein 1##BC028577|CRISP1|167|cysteine-rich secretory protein 1##NM_001205220|CRISP1|167|cysteine-rich secretory protein 1##DQ012023|DEFB133|403339|defensin, beta 133##NM_001166478|DEFB133|403339|defensin, beta 133	0.999678	CTCF.p2:17:1.000
chr16	87096425	87096533	reg1010391.p2	9.664	+	BC100027 NM_005250	-484365	+	BC113437 BC113439 NM_005251	-495623	+	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	-507707	-	TSC_hg19_v1_chr16_-_87350760 AB528835 AM392822 AM393070	254321	-	TSC_hg19_v1_chr16_-_87350999 BC015536 AK026130 NM_001195124 NM_001195125	254507	-	TSC_hg19_v1_chr16_-_87417364 AY736035 AF428140 BC012748 BC002985 NM_024735	320883	-	BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AM392822|C16orf95|100506581|chromosome 16 open reading frame 95##AM393070|C16orf95|100506581|chromosome 16 open reading frame 95##BC015536|C16orf95|100506581|chromosome 16 open reading frame 95##AK026130|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195124|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195125|C16orf95|100506581|chromosome 16 open reading frame 95##AY736035|FBXO31|79791|F-box protein 31##AF428140|FBXO31|79791|F-box protein 31##BC012748|FBXO31|79791|F-box protein 31##BC002985|FBXO31|79791|F-box protein 31##NM_024735|FBXO31|79791|F-box protein 31	0.998746	CTCF.p2:-7:0.999
chr5	176085156	176085289	reg1013946.p1	9.664	+	TSC_hg19_v1_chr5_+_176074497 AK024427 BC067105 BC010405 AF174603 CU679699 CU688248	-10670	+	NM_001006616 NM_012171 NM_130465 TSC_hg19_v1_chr5_+_176074470 AY037146	-10792	+	NM_001099408	-27540	+	TSC_hg19_v1_chr5_+_176237521 AK131380 NM_133369 BC157824	152333	+	U51333 BC028129 NM_002115	241101	-	AK304794 BX537376 NM_016290 AK023044 BC032561 BC006078 BC014069 AF349313 NM_001199297 NM_001199298 TSC_hg19_v1_chr5_-_176433806	348366	-	AK024427|TSPAN17|26262|tetraspanin 17##BC067105|TSPAN17|26262|tetraspanin 17##BC010405|TSPAN17|26262|tetraspanin 17##AF174603|TSPAN17|26262|tetraspanin 17##NM_001006616|TSPAN17|26262|tetraspanin 17##NM_012171|TSPAN17|26262|tetraspanin 17##NM_130465|TSPAN17|26262|tetraspanin 17##AY037146|TSPAN17|26262|tetraspanin 17##NM_001099408|EIF4E1B|253314|eukaryotic translation initiation factor 4E family member 1B##AK131380|UNC5A|90249|unc-5 homolog A (C. elegans)##NM_133369|UNC5A|90249|unc-5 homolog A (C. elegans)##BC157824|UNC5A|90249|unc-5 homolog A (C. elegans)##U51333|HK3|3101|hexokinase 3 (white cell)##BC028129|HK3|3101|hexokinase 3 (white cell)##NM_002115|HK3|3101|hexokinase 3 (white cell)##AK304794|UIMC1|51720|ubiquitin interaction motif containing 1##BX537376|UIMC1|51720|ubiquitin interaction motif containing 1##NM_016290|UIMC1|51720|ubiquitin interaction motif containing 1##AK023044|UIMC1|51720|ubiquitin interaction motif containing 1##BC032561|UIMC1|51720|ubiquitin interaction motif containing 1##BC006078|UIMC1|51720|ubiquitin interaction motif containing 1##AF349313|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199297|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199298|UIMC1|51720|ubiquitin interaction motif containing 1	0.185378	
chr15	84915175	84915275	reg1009436.p1	9.663	+	NM_001243531	-73984	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-592398	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-798997	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	229056	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	282247	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	282281	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	0.919612	CTCF.p2:-7:0.920
chr20	43639849	43639968	reg1011049.p2	9.663	+	AK315238 U60207 TSC_hg19_v1_chr20_+_43595176 BC058916 BC039023 U18297	-44717	+	NM_006282 TSC_hg19_v1_chr20_+_43595152 AB209315 BC029511 AK309169 AK225326 BC005231 BC015332 BC038850 CR933633 BC093768	-44762	+	AB590243 BT020008 BT020009 CR456765 CU677113 DQ891151 EU176561 TSC_hg19_v1_chr20_-_43589038 AK129538 U58970 BC014907 AK222952 BC001763 BC007423 AK000594 BC006573 AB085681 AK302128 AK307655 NM_006809	-50854	-	BC132957 BC132959 BC144234 TSC_hg19_v1_chr20_-_43729732 AK289735 NM_002251	89781	-	CU691668 AY038181 BC039173 AY358822 NM_145652	103859	-	AB464352 AY358678 AY037803 NM_080869	113188	-	AK315238|STK4|6789|serine/threonine kinase 4##U60207|STK4|6789|serine/threonine kinase 4##BC058916|STK4|6789|serine/threonine kinase 4##BC039023|STK4|6789|serine/threonine kinase 4##U18297|STK4|6789|serine/threonine kinase 4##NM_006282|STK4|6789|serine/threonine kinase 4##AB209315|STK4|6789|serine/threonine kinase 4##BC029511|STK4|6789|serine/threonine kinase 4##AK309169|STK4|6789|serine/threonine kinase 4##AK225326|STK4|6789|serine/threonine kinase 4##BC005231|STK4|6789|serine/threonine kinase 4##BC015332|STK4|6789|serine/threonine kinase 4##BC038850|STK4|6789|serine/threonine kinase 4##CR933633|STK4|6789|serine/threonine kinase 4##BC093768|STK4|6789|serine/threonine kinase 4##BT020008|TOMM34|10953|translocase of outer mitochondrial membrane 34##BT020009|TOMM34|10953|translocase of outer mitochondrial membrane 34##CR456765|TOMM34|10953|translocase of outer mitochondrial membrane 34##DQ891151|TOMM34|10953|translocase of outer mitochondrial membrane 34##EU176561|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK129538|TOMM34|10953|translocase of outer mitochondrial membrane 34##U58970|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC014907|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK222952|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC001763|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC007423|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK000594|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC006573|TOMM34|10953|translocase of outer mitochondrial membrane 34##AB085681|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK302128|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK307655|TOMM34|10953|translocase of outer mitochondrial membrane 34##NM_006809|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC132957|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC132959|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC144234|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##AK289735|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##NM_002251|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##AY038181|WFDC5|149708|WAP four-disulfide core domain 5##BC039173|WFDC5|149708|WAP four-disulfide core domain 5##AY358822|WFDC5|149708|WAP four-disulfide core domain 5##NM_145652|WFDC5|149708|WAP four-disulfide core domain 5##AY358678|WFDC12|128488|WAP four-disulfide core domain 12##AY037803|WFDC12|128488|WAP four-disulfide core domain 12##NM_080869|WFDC12|128488|WAP four-disulfide core domain 12	0.990922	CTCF.p2:4:0.991
chr9	6585266	6585379	reg1010820.p1	9.663	+	TSC_hg19_v1_chr9_+_6413338 AF274049 AB071698 EU176286 EU176602 AB385208	-171917	+	TSC_hg19_v1_chr9_+_6413200 AK308433	-172125	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	-172178	+	BC111993 BC111995 M63635 D90239 M64590 AK314156 NM_000170	60305	-	AK310439 NM_001146696	135540	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	172345	+	AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK308433|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC111993|GLDC|2731|glycine dehydrogenase (decarboxylating)##BC111995|GLDC|2731|glycine dehydrogenase (decarboxylating)##M63635|GLDC|2731|glycine dehydrogenase (decarboxylating)##D90239|GLDC|2731|glycine dehydrogenase (decarboxylating)##M64590|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK314156|GLDC|2731|glycine dehydrogenase (decarboxylating)##NM_000170|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C	0.803794	CTCF.p2:2:0.804
chr10	88659560	88659698	reg1012337.p1	9.662	+	TSC_hg19_v1_chr10_+_88516526 NM_004329 BC028383 AK291764 Z22535	-143142	+	AK304760 TSC_hg19_v1_chr10_+_88428267 AK300692 AK297871 NM_001080116 AJ133766 BC010929 NM_001080114 NM_001080115 NM_001171611 NM_007078 AB014513 AF276807 AF276808 AF276809 AJ133767 AJ133768	-231274	+	TSC_hg19_v1_chr10_+_88428170 NM_001171610	-231443	+	TSC_hg19_v1_chr10_-_88717330 BC072456 AK304727 AK023527 AK293822 BC094744 BC064415 AK308401 NM_024756	57742	-	NM_003087 AK223367 AK311652 BC014098 AK312141 AF017256 AF411524 EU019993 AF010126 DQ892334 DQ892505 DQ895719 EU176715 AB464279 CR541788 CR541790	58741	+	NM_006829 TSC_hg19_v1_chr10_+_88728238 AK304688 AK312031 BC004471 D45370	68599	+	NM_004329|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC028383|BMPR1A|657|bone morphogenetic protein receptor, type IA##AK291764|BMPR1A|657|bone morphogenetic protein receptor, type IA##Z22535|BMPR1A|657|bone morphogenetic protein receptor, type IA##AK304760|LDB3|11155|LIM domain binding 3##AK300692|LDB3|11155|LIM domain binding 3##AK297871|LDB3|11155|LIM domain binding 3##NM_001080116|LDB3|11155|LIM domain binding 3##AJ133766|LDB3|11155|LIM domain binding 3##BC010929|LDB3|11155|LIM domain binding 3##NM_001080114|LDB3|11155|LIM domain binding 3##NM_001080115|LDB3|11155|LIM domain binding 3##NM_001171611|LDB3|11155|LIM domain binding 3##NM_007078|LDB3|11155|LIM domain binding 3##AB014513|LDB3|11155|LIM domain binding 3##AF276807|LDB3|11155|LIM domain binding 3##AF276808|LDB3|11155|LIM domain binding 3##AF276809|LDB3|11155|LIM domain binding 3##AJ133767|LDB3|11155|LIM domain binding 3##AJ133768|LDB3|11155|LIM domain binding 3##NM_001171610|LDB3|11155|LIM domain binding 3##BC072456|MMRN2|79812|multimerin 2##AK304727|MMRN2|79812|multimerin 2##AK023527|MMRN2|79812|multimerin 2##AK293822|MMRN2|79812|multimerin 2##BC094744|MMRN2|79812|multimerin 2##BC064415|MMRN2|79812|multimerin 2##AK308401|MMRN2|79812|multimerin 2##NM_024756|MMRN2|79812|multimerin 2##NM_003087|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK223367|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##BC014098|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK312141|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF017256|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF411524|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU019993|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF010126|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892334|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892505|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ895719|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU176715|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541788|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541790|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##NM_006829|C10orf116|10974|chromosome 10 open reading frame 116##AK312031|C10orf116|10974|chromosome 10 open reading frame 116##BC004471|C10orf116|10974|chromosome 10 open reading frame 116##D45370|C10orf116|10974|chromosome 10 open reading frame 116	0.597771	CTCF.p2:8:0.598
chr11	14558717	14558875	reg1013735.p1	9.662	+	TSC_hg19_v1_chr11_-_14541903 AK293813 BC008472 BC015356 BC009576 BC002577 BC015105 BC005932 AK303565 AK290765 X61969 NM_001143937 NM_002786	-16858	-	TSC_hg19_v1_chr11_-_14541879 BC022372 D00759	-16920	-	TSC_hg19_v1_chr11_-_14521392 BC037280 NM_016451 NM_001144062 NM_001144061	-37383	-	M64992 NM_148976 TSC_hg19_v1_chr11_-_14665207	106394	-	BC150307 NM_000922 TSC_hg19_v1_chr11_+_14665306	106491	+	TSC_hg19_v1_chr11_+_14665310 AY459346	106525	+	BC008472|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##BC015356|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##BC009576|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##BC002577|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##BC015105|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##BC005932|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##AK303565|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##AK290765|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##X61969|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##NM_001143937|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##NM_002786|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##BC022372|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##D00759|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##BC037280|COPB1|1315|coatomer protein complex, subunit beta 1##NM_016451|COPB1|1315|coatomer protein complex, subunit beta 1##NM_001144062|COPB1|1315|coatomer protein complex, subunit beta 1##NM_001144061|COPB1|1315|coatomer protein complex, subunit beta 1##M64992|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##NM_148976|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##BC150307|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##NM_000922|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##AY459346|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited	0.0	
chr11	67033743	67033844	reg1012512.p1	9.662	+	TSC_hg19_v1_chr11_+_67007558 AB490246 AK299725	-26210	+	AK096194 TSC_hg19_v1_chr11_+_67007484	-26309	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	-147054	+	TSC_hg19_v1_chr11_+_67033926 NM_001619	115	+	TSC_hg19_v1_chr11_+_67033929 BC037963 BC090863	141	+	TSC_hg19_v1_chr11_+_67034155 M80776	360	+	AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A##AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A##AK096194|LOC100131150|100131150|uncharacterized LOC100131150##BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_001619|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC037963|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC090863|ADRBK1|156|adrenergic, beta, receptor kinase 1##M80776|ADRBK1|156|adrenergic, beta, receptor kinase 1	0.998789	CTCF.p2:18:0.999
chr12	102937396	102937489	reg1011368.p1	9.662	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-63060	-	M11568 TSC_hg19_v1_chr12_-_102874344	-63100	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-63120	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	373524	-	TSC_hg19_v1_chr12_-_103311062 BC026251	373621	-	L47726 NM_000277 U49897	373938	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.962198	CTCF.p2:15:0.962
chr20	33684163	33684264	reg1011119.p1	9.662	+	TSC_hg19_v1_chr20_-_33680611 AK298958 AK303476 AK315582 NM_015638 NM_199368	-3573	-	TSC_hg19_v1_chr20_-_33680600 AK074106	-3617	-	TSC_hg19_v1_chr20_-_33680592 AB590540 CU680522 BC013144	-3741	-	AK096016 AK298794 TSC_hg19_v1_chr20_-_33734933	50700	-	CR457266 CU674674 TSC_hg19_v1_chr20_-_33735112 BC016184 AK300212 AY358580 BC001371 AK023931 AK303816 AK001645 NM_001145025 NM_018217	50911	-	AK314887 NM_006404 BC014451 X89079 L35545 CR456948 DQ892834 DQ896081	75652	+	AK298958|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK303476|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK315582|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##NM_015638|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##NM_199368|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK074106|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##BC013144|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK096016|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK298794|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##CR457266|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##BC016184|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK300212|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AY358580|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##BC001371|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK023931|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK303816|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK001645|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##NM_001145025|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##NM_018217|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK314887|PROCR|10544|protein C receptor, endothelial##NM_006404|PROCR|10544|protein C receptor, endothelial##BC014451|PROCR|10544|protein C receptor, endothelial##X89079|PROCR|10544|protein C receptor, endothelial##L35545|PROCR|10544|protein C receptor, endothelial##CR456948|PROCR|10544|protein C receptor, endothelial##DQ892834|PROCR|10544|protein C receptor, endothelial##DQ896081|PROCR|10544|protein C receptor, endothelial	1.012294	CTCF.p2:-18:0.989
chr9	86452147	86452272	reg1013887.p1	9.662	+	AB033131 AB033132 BC014476 NM_001135953 NM_025211	-19561	-	AK074535 TSC_hg19_v1_chr9_-_86323127 NM_013438 NM_053067	-129067	-	TSC_hg19_v1_chr9_-_86322874 AL136643	-129337	-	TSC_hg19_v1_chr9_-_86536400 AK297689 BC140788 AY237536 AY237537 AY237538 NM_017576	84180	-	BC137461 BC137462 TSC_hg19_v1_chr9_-_86571611	119366	-	BC004407 TSC_hg19_v1_chr9_-_86571631	119430	-	AB033131|GKAP1|80318|G kinase anchoring protein 1##AB033132|GKAP1|80318|G kinase anchoring protein 1##BC014476|GKAP1|80318|G kinase anchoring protein 1##NM_001135953|GKAP1|80318|G kinase anchoring protein 1##NM_025211|GKAP1|80318|G kinase anchoring protein 1##AK074535|UBQLN1|29979|ubiquilin 1##NM_013438|UBQLN1|29979|ubiquilin 1##NM_053067|UBQLN1|29979|ubiquilin 1##AL136643|UBQLN1|29979|ubiquilin 1##AK297689|KIF27|55582|kinesin family member 27##BC140788|KIF27|55582|kinesin family member 27##AY237536|KIF27|55582|kinesin family member 27##AY237537|KIF27|55582|kinesin family member 27##AY237538|KIF27|55582|kinesin family member 27##NM_017576|KIF27|55582|kinesin family member 27##BC137461|C9orf64|84267|chromosome 9 open reading frame 64##BC137462|C9orf64|84267|chromosome 9 open reading frame 64##BC004407|C9orf64|84267|chromosome 9 open reading frame 64	0.766601	CTCF.p2:-22:0.767
chr1	24913807	24913926	reg1010208.p1	9.661	+	TSC_hg19_v1_chr1_+_24882611 NM_001010980 AK124519	-31267	+	HQ317426 JN203053 NM_001251980 NM_001251982 NM_001251985 EF467309 EF431960 EF529733 AF176116 TSC_hg19_v1_chr1_+_24840858 AY906854 DQ892434 DQ895645 AF176117	-73007	+	HQ317423 HQ317445 HQ317446 NM_001251978	-79783	+	AF419855 NM_005839 TSC_hg19_v1_chr1_+_24969669	55767	+	TSC_hg19_v1_chr1_+_24969763 BC011019 BC036187	55872	+	TSC_hg19_v1_chr1_+_24969792 AK302498	55913	+	NM_001010980|C1orf130|400746|chromosome 1 open reading frame 130##AK124519|C1orf130|400746|chromosome 1 open reading frame 130##HQ317426|RCAN3|11123|RCAN family member 3##JN203053|RCAN3|11123|RCAN family member 3##NM_001251980|RCAN3|11123|RCAN family member 3##NM_001251982|RCAN3|11123|RCAN family member 3##NM_001251985|RCAN3|11123|RCAN family member 3##EF467309|RCAN3|11123|RCAN family member 3##EF431960|RCAN3|11123|RCAN family member 3##EF529733|RCAN3|11123|RCAN family member 3##AF176116|RCAN3|11123|RCAN family member 3##AY906854|RCAN3|11123|RCAN family member 3##DQ892434|RCAN3|11123|RCAN family member 3##DQ895645|RCAN3|11123|RCAN family member 3##AF176117|RCAN3|11123|RCAN family member 3##HQ317423|RCAN3|11123|RCAN family member 3##NM_001251978|RCAN3|11123|RCAN family member 3##AF419855|SRRM1|10250|serine/arginine repetitive matrix 1##NM_005839|SRRM1|10250|serine/arginine repetitive matrix 1##BC011019|SRRM1|10250|serine/arginine repetitive matrix 1##BC036187|SRRM1|10250|serine/arginine repetitive matrix 1##AK302498|SRRM1|10250|serine/arginine repetitive matrix 1	0.663059	CTCF.p2:26:0.663
chr12	63207120	63207255	reg1013063.p1	9.661	+	BC136288 AK098456 NM_175895	-209977	-	AK022671 TSC_hg19_v1_chr12_+_62954346	-252876	+	BC042679 AB017814 AB384555 TSC_hg19_v1_chr12_+_62861012	-346272	+	TSC_hg19_v1_chr12_-_63328666 NM_020700 BC157843	121518	-	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	121738	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	337484	-	BC136288|C12orf61|283416|chromosome 12 open reading frame 61##AK098456|C12orf61|283416|chromosome 12 open reading frame 61##NM_175895|C12orf61|283416|chromosome 12 open reading frame 61##AK022671|MON2|23041|MON2 homolog (S. cerevisiae)##AB017814|MON2|23041|MON2 homolog (S. cerevisiae)##NM_020700|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC157843|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A	0.051881	
chr14	100659223	100659340	reg1005373.p1	9.661	+	AY541700 BC063598 TSC_hg19_v1_chr14_-_100626009 NM_206918	-33310	-	AF131766 TSC_hg19_v1_chr14_+_100563847	-95448	+	TSC_hg19_v1_chr14_+_100531768 AF087843 BC032358 AF052504	-127486	+	NM_003403 TSC_hg19_v1_chr14_+_100705177	45861	+	TSC_hg19_v1_chr14_+_100705309 M77698	46031	+	TSC_hg19_v1_chr14_+_100705474 BC037308 M76541 BC020324 BC065366 AB464361 DQ891638 EU176600 CU691478	46225	+	AY541700|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##BC063598|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##NM_206918|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##AF131766|EVL|51466|Enah/Vasp-like##AF087843|EVL|51466|Enah/Vasp-like##BC032358|EVL|51466|Enah/Vasp-like##AF052504|EVL|51466|Enah/Vasp-like##NM_003403|YY1|7528|YY1 transcription factor##M77698|YY1|7528|YY1 transcription factor##BC037308|YY1|7528|YY1 transcription factor##M76541|YY1|7528|YY1 transcription factor##BC020324|YY1|7528|YY1 transcription factor##BC065366|YY1|7528|YY1 transcription factor##DQ891638|YY1|7528|YY1 transcription factor##EU176600|YY1|7528|YY1 transcription factor	0.837474	CTCF.p2:5:0.837
chr15	78259253	78259396	reg1013833.p1	9.661	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-334544	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-334625	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-546062	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	110629	-	NM_001101404	125602	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	164438	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.90141	CTCF.p2:-9:0.901
chr15	96888859	96888981	reg1010816.p2	9.661	+	NM_001145157	-12352	+	AK316086 NM_001145156	-13127	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	-14943	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	437752	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	1614999	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	1615031	+	NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4	0.054672	
chr17	66968403	66968508	reg1011386.p1	9.661	+	BC130280 BC143971 BC143972 AK304286 BC010392 AB020629 BC047765 BC094689 AK304360 AK295876 BC037309 BC024003 NM_007168	-16999	-	AK056789 BC136686 BC136689 AY358197 NM_001243746 NM_017565 TSC_hg19_v1_chr17_-_66597112	-371432	-	AK298071 TSC_hg19_v1_chr17_-_66596742	-371716	-	BC062472 AK057068 AY028899 NM_080283	88635	-	BC125231 BC125232 AY028898 NM_080284 TSC_hg19_v1_chr17_-_67138037 BC070125 AK308431 BC029852	169620	-	AY028900 NM_080282 AY247065	272515	-	BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK056789|FAM20A|54757|family with sequence similarity 20, member A##BC136686|FAM20A|54757|family with sequence similarity 20, member A##BC136689|FAM20A|54757|family with sequence similarity 20, member A##AY358197|FAM20A|54757|family with sequence similarity 20, member A##NM_001243746|FAM20A|54757|family with sequence similarity 20, member A##NM_017565|FAM20A|54757|family with sequence similarity 20, member A##AK298071|FAM20A|54757|family with sequence similarity 20, member A##BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10	0.999701	CTCF.p2:4:1.000
chr11	47199026	47199187	reg1011575.p1	9.660	+	NM_001242832 NM_032389	-431	-	TSC_hg19_v1_chr11_-_47198431 AK315992 AK098324	-673	-	AK301785 AL834337 EU832352 EU832437 AK300347 BC036823 AK027482 TSC_hg19_v1_chr11_-_47198413 AK304541 BC030148	-707	-	AK300968 AK000577 NM_001184975	8322	-	BC007914 AF149825 TSC_hg19_v1_chr11_-_47207959 AF242530 AK300658 BC011889 NM_001184974 NM_016223	8876	-	NM_000107 U18300 TSC_hg19_v1_chr11_+_47236524 AK313262 BC050455 AK091640 AX747106 BC000093 AB527602 AB107037 AB107038 AB107039 AB107040 BT007139 CU674030 DQ890719	37483	+	NM_001242832|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_032389|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK315992|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK098324|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK301785|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AL834337|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832352|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832437|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300347|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC036823|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK027482|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK304541|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC030148|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300968|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AK000577|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##NM_001184975|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##BC007914|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AF149825|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AF242530|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AK300658|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##BC011889|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##NM_001184974|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##NM_016223|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##NM_000107|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##U18300|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AK313262|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BC050455|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AK091640|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BC000093|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107037|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107038|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107039|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107040|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BT007139|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##DQ890719|DDB2|1643|damage-specific DNA binding protein 2, 48kDa	1.834242	CTCF.p2:30:0.921	CTCF.p2:-84:0.914
chr17	34493463	34493592	reg1013094.p2	9.660	+	AY766446 AY766448 NM_002984 BC107433 M23502 BC104226 BC104227 M25316 X53683 BC027961 X16166 AY312578 CR542119 M57503	-62260	+	D63785 AB463487 BC171831 BC171891 BC071834 M25315 D00044 M23452 X03754 NM_002983	-76082	-	AB000221 NM_002988 Y13710 BC096124 BC096125 BC096126 BC096127 BC069700 AB590849 AB451458 CR407660	-101857	+	BC033670 AK301823 BC071680 AK225985 AK292257 NM_001001417	10423	-	D63785 BT006783 BC146914 BC146919 BC147008 BC147013 BC007783 X52149 BC027888 BC063472 NM_001001437 NM_021006 BC107710	30578	-	AY766447 AY766449 AY766450 AY766451 AY766452 AY766453 AY766454 AY766455 AY766456 AY766457 AY766458 BC070310 BC092445 NM_001001435 NM_207007 BC071718 BC130456 BC130458 BC144393 BC144394 HQ258694	44975	+	AY766446|CCL4|6351|chemokine (C-C motif) ligand 4##AY766448|CCL4|6351|chemokine (C-C motif) ligand 4##NM_002984|CCL4|6351|chemokine (C-C motif) ligand 4##BC107433|CCL4|6351|chemokine (C-C motif) ligand 4##M23502|CCL4|6351|chemokine (C-C motif) ligand 4##BC104226|CCL4|6351|chemokine (C-C motif) ligand 4##BC104227|CCL4|6351|chemokine (C-C motif) ligand 4##M25316|CCL4|6351|chemokine (C-C motif) ligand 4##X53683|CCL4|6351|chemokine (C-C motif) ligand 4##BC027961|CCL4|6351|chemokine (C-C motif) ligand 4##X16166|CCL4|6351|chemokine (C-C motif) ligand 4##AY312578|CCL4|6351|chemokine (C-C motif) ligand 4##CR542119|CCL4|6351|chemokine (C-C motif) ligand 4##M57503|CCL4|6351|chemokine (C-C motif) ligand 4##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BC171831|CCL3|6348|chemokine (C-C motif) ligand 3##BC171891|CCL3|6348|chemokine (C-C motif) ligand 3##BC071834|CCL3|6348|chemokine (C-C motif) ligand 3##M25315|CCL3|6348|chemokine (C-C motif) ligand 3##D00044|CCL3|6348|chemokine (C-C motif) ligand 3##M23452|CCL3|6348|chemokine (C-C motif) ligand 3##X03754|CCL3|6348|chemokine (C-C motif) ligand 3##NM_002983|CCL3|6348|chemokine (C-C motif) ligand 3##AB000221|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##NM_002988|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##Y13710|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096124|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096125|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096126|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096127|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC069700|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##AB451458|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##CR407660|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK292257|TBC1D3B|414059|TBC1 domain family, member 3B##NM_001001417|TBC1D3B|414059|TBC1 domain family, member 3B##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BT006783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC146914|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC146919|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147008|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147013|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC007783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##X52149|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC027888|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC063472|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_001001437|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_021006|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC107710|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##AY766447|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766449|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766450|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766451|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766452|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766453|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766454|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766455|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766457|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC070310|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC092445|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_001001435|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_207007|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##BC130456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC130458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144393|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144394|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##HQ258694|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2	0.243231	CTCF.p2:24:0.231
chr9	32968512	32968637	reg1011620.p1	9.660	+	AK125320 NM_212558 BX647550	-185058	+	BC116181 BC116182 AF390562 NM_153809	-332934	-	CR456920 TSC_hg19_v1_chr9_-_32573139 AF035840 BC029247 AK289702 AF067167 BC009801 NM_001199987 NM_002493 NM_182739	-395452	-	AY208839 AY208836 AY208835 AY208833 NM_001195249 AK131046 AB528955 TSC_hg19_v1_chr9_-_33001627 AY208831 AY208837 AY208834 NM_001195254 AY040777 AY208829 AY208832 BC068107 AY208840 AJ565850 AJ565851 AJ565852 BX538161 AK055672 AY208830 NM_001195248 NM_001195250 NM_001195251 NM_001195252 NM_175069 NM_175073	33004	-	TSC_hg19_v1_chr9_+_33025226 NM_001539	56654	+	TSC_hg19_v1_chr9_+_33025272 AK289623 AK298725 AY186741 D13388 BC008182	56704	+	AK125320|TMEM215|401498|transmembrane protein 215##NM_212558|TMEM215|401498|transmembrane protein 215##BX647550|TMEM215|401498|transmembrane protein 215##BC116181|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##BC116182|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##AF390562|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##NM_153809|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##CR456920|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AF035840|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC029247|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AK289702|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AF067167|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC009801|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_001199987|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_002493|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_182739|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AY208839|APTX|54840|aprataxin##AY208836|APTX|54840|aprataxin##AY208835|APTX|54840|aprataxin##AY208833|APTX|54840|aprataxin##NM_001195249|APTX|54840|aprataxin##AK131046|APTX|54840|aprataxin##AY208831|APTX|54840|aprataxin##AY208837|APTX|54840|aprataxin##AY208834|APTX|54840|aprataxin##NM_001195254|APTX|54840|aprataxin##AY040777|APTX|54840|aprataxin##AY208829|APTX|54840|aprataxin##AY208832|APTX|54840|aprataxin##BC068107|APTX|54840|aprataxin##AY208840|APTX|54840|aprataxin##AJ565850|APTX|54840|aprataxin##AJ565851|APTX|54840|aprataxin##AJ565852|APTX|54840|aprataxin##BX538161|APTX|54840|aprataxin##AK055672|APTX|54840|aprataxin##AY208830|APTX|54840|aprataxin##NM_001195248|APTX|54840|aprataxin##NM_001195250|APTX|54840|aprataxin##NM_001195251|APTX|54840|aprataxin##NM_001195252|APTX|54840|aprataxin##NM_175069|APTX|54840|aprataxin##NM_175073|APTX|54840|aprataxin##NM_001539|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##AK289623|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##AK298725|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##AY186741|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##D13388|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##BC008182|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1	0.999963	CTCF.p2:18:1.000
chr11	44654440	44654564	reg1014693.p1	9.659	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-67275	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-67337	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-322826	-	NM_130783	131473	+	TSC_hg19_v1_chr11_-_44956087 AF010315	301605	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	317915	-	AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_130783|TSPAN18|90139|tetraspanin 18##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11	0.843122	CTCF.p2:7:0.812
chr19	3700572	3700667	reg1012163.p1	9.659	+	TSC_hg19_v1_chr19_-_3700467 NM_001195733 NM_012398	-145	-	AK301309 TSC_hg19_v1_chr19_-_3700461 AK315912	-159	-	FJ965536 FJ965537 TSC_hg19_v1_chr19_-_3700457 AB385354 AB011161	-197	-	TSC_hg19_v1_chr19_+_3708368 AK091118 AK304462	7810	+	BC108906 BC108907 NM_014428	27754	+	TSC_hg19_v1_chr19_-_3761636 AB021638 NM_004886	61029	-	NM_001195733|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##NM_012398|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AK301309|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AK315912|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##FJ965536|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##FJ965537|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AB011161|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AK091118|TJP3|27134|tight junction protein 3 (zona occludens 3)##AK304462|TJP3|27134|tight junction protein 3 (zona occludens 3)##BC108906|TJP3|27134|tight junction protein 3 (zona occludens 3)##BC108907|TJP3|27134|tight junction protein 3 (zona occludens 3)##NM_014428|TJP3|27134|tight junction protein 3 (zona occludens 3)##AB021638|APBA3|9546|amyloid beta (A4) precursor protein-binding, family A, member 3##NM_004886|APBA3|9546|amyloid beta (A4) precursor protein-binding, family A, member 3	0.134967	
chrX	15261173	15261290	reg1012436.p1	9.659	+	AK093075 AX747905 NM_001177475	-357819	+	NM_152581 TSC_hg19_v1_chrX_+_14891582 BC030641 AL832230 AK315781	-369675	+	TSC_hg19_v1_chrX_-_14891182 BC136558 BC136560 BC043596 BC055411 NM_001018113 NM_152633 AK091383 AX746948	-370056	-	BC001244 AK000643 BC013172 NM_001031739 NM_001168530 NM_024087	27001	-	AK292270 NM_001168531	27357	-	BX537853 NM_001012428	71449	-	AK093075|MOSPD2|158747|motile sperm domain containing 2##NM_001177475|MOSPD2|158747|motile sperm domain containing 2##NM_152581|MOSPD2|158747|motile sperm domain containing 2##BC030641|MOSPD2|158747|motile sperm domain containing 2##AL832230|MOSPD2|158747|motile sperm domain containing 2##AK315781|MOSPD2|158747|motile sperm domain containing 2##BC136558|FANCB|2187|Fanconi anemia, complementation group B##BC136560|FANCB|2187|Fanconi anemia, complementation group B##BC043596|FANCB|2187|Fanconi anemia, complementation group B##BC055411|FANCB|2187|Fanconi anemia, complementation group B##NM_001018113|FANCB|2187|Fanconi anemia, complementation group B##NM_152633|FANCB|2187|Fanconi anemia, complementation group B##AK091383|FANCB|2187|Fanconi anemia, complementation group B##BC001244|ASB9|140462|ankyrin repeat and SOCS box containing 9##AK000643|ASB9|140462|ankyrin repeat and SOCS box containing 9##BC013172|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_001031739|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_001168530|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_024087|ASB9|140462|ankyrin repeat and SOCS box containing 9##AK292270|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_001168531|ASB9|140462|ankyrin repeat and SOCS box containing 9##BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11##NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11	0.998903	CTCF.p2:15:0.999
chr15	57853330	57853459	reg1012460.p1	9.658	+	AK056673 AK307410 NM_001252335 NM_032866 TSC_hg19_v1_chr15_+_57668732 AY274808 BC030995 AY610514	-184677	+	TSC_hg19_v1_chr15_+_57511630 AK294991 AK304007 AK311359 AK308101 NM_207040 BX537967 AM393573	-341727	+	TSC_hg19_v1_chr15_+_57210977 M83233	-642394	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	30771	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	145492	+	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	145586	+	AK056673|CGNL1|84952|cingulin-like 1##AK307410|CGNL1|84952|cingulin-like 1##NM_001252335|CGNL1|84952|cingulin-like 1##NM_032866|CGNL1|84952|cingulin-like 1##AY274808|CGNL1|84952|cingulin-like 1##BC030995|CGNL1|84952|cingulin-like 1##AY610514|CGNL1|84952|cingulin-like 1##AK294991|TCF12|6938|transcription factor 12##AK304007|TCF12|6938|transcription factor 12##AK311359|TCF12|6938|transcription factor 12##AK308101|TCF12|6938|transcription factor 12##NM_207040|TCF12|6938|transcription factor 12##BX537967|TCF12|6938|transcription factor 12##AM393573|TCF12|6938|transcription factor 12##M83233|TCF12|6938|transcription factor 12##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M	0.965925	CTCF.p2:-27:0.966
chr3	149685020	149685168	reg1013187.p1	9.658	+	BC009781 BC009803 TSC_hg19_v1_chr3_+_149531012 AF037204 AF070558 BC017878	-154064	+	TSC_hg19_v1_chr3_+_149530987 AK313304	-154108	+	TSC_hg19_v1_chr3_+_149530500 NM_007282 NM_183381 AK090638	-154617	+	TSC_hg19_v1_chr3_-_149688683 AB464068 AF228738 EU832616 EU832688 AK311782 L10678 BC002964 BC095444 AK307227 AK311780 BC018049 AK297915 NM_002628 NM_053024	3602	-	TSC_hg19_v1_chr3_-_149688960 BC043646	3835	-	BC012363 TSC_hg19_v1_chr3_+_149689094	3986	+	BC009781|RNF13|11342|ring finger protein 13##BC009803|RNF13|11342|ring finger protein 13##AF037204|RNF13|11342|ring finger protein 13##AF070558|RNF13|11342|ring finger protein 13##BC017878|RNF13|11342|ring finger protein 13##AK313304|RNF13|11342|ring finger protein 13##NM_007282|RNF13|11342|ring finger protein 13##NM_183381|RNF13|11342|ring finger protein 13##AK090638|RNF13|11342|ring finger protein 13##AF228738|PFN2|5217|profilin 2##EU832616|PFN2|5217|profilin 2##EU832688|PFN2|5217|profilin 2##AK311782|PFN2|5217|profilin 2##L10678|PFN2|5217|profilin 2##BC002964|PFN2|5217|profilin 2##BC095444|PFN2|5217|profilin 2##AK307227|PFN2|5217|profilin 2##AK311780|PFN2|5217|profilin 2##BC018049|PFN2|5217|profilin 2##AK297915|PFN2|5217|profilin 2##NM_002628|PFN2|5217|profilin 2##NM_053024|PFN2|5217|profilin 2##BC043646|PFN2|5217|profilin 2##BC012363|LOC646903|646903|uncharacterized LOC646903	0.977533	CTCF.p2:-24:0.978
chr6	140762524	140762674	reg1013130.p1	9.658	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-1066815	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-1066838	-	NM_001168389 NM_001168388	-1067176	-	BC095542 GU727635 M73482 NM_002511	1647265	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	1705791	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	1705807	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.380452	CTCF.p2:22:0.380
chr7	105230027	105230162	reg1014903.p1	9.658	+	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	-8159	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	-57448	+	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	-67433	-	AK300338 NM_138495	89514	-	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	286891	-	TSC_hg19_v1_chr7_+_105517250 AK125261	287170	+	BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##AK125261|CDHR3|222256|cadherin-related family member 3	0.880543	CTCF.p2:7:0.870
chr8	127836774	127836903	reg1014015.p1	9.657	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-266114	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-266283	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-873425	-	DQ486513 NM_001159542	591018	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	911487	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	911652	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.999807	CTCF.p2:-13:1.000
chr7	83565536	83565656	reg1011088.p1	9.656	+	NM_012431	-287118	-	AK303925 NM_001178129	-294850	-	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	-773360	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	258726	-	NM_152754	1185650	-	AK309116 TSC_hg19_v1_chr7_-_84816296	1250639	-	NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	0.99944	CTCF.p2:-23:0.999
chr8	102339320	102339445	reg1012036.p1	9.656	+	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	-121428	-	TSC_hg19_v1_chr8_-_102217877 NM_001042511	-121506	-	BC035233 TSC_hg19_v1_chr8_-_102217845 BC015925 AF125099 AF275802 AF275809 AK290477 BC068524	-121689	-	TSC_hg19_v1_chr8_+_102504667 NM_024915 AK296817 AK310221	165283	+	TSC_hg19_v1_chr8_+_102504840 AK023844 AK292853 BC069618 BC069633 BC069638 BC129822 BC129823	165528	+	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	463801	-	NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706##NM_001042511|ZNF706|51123|zinc finger protein 706##BC035233|ZNF706|51123|zinc finger protein 706##BC015925|ZNF706|51123|zinc finger protein 706##AF125099|ZNF706|51123|zinc finger protein 706##AF275802|ZNF706|51123|zinc finger protein 706##AF275809|ZNF706|51123|zinc finger protein 706##AK290477|ZNF706|51123|zinc finger protein 706##BC068524|ZNF706|51123|zinc finger protein 706##NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta	0.999582	CTCF.p2:-14:1.000
chr11	45986561	45986678	reg1011592.p1	9.655	+	TSC_hg19_v1_chr11_+_45944226 BC037291	-42403	+	AK055829 AK096021 NM_152312	-43436	+	TSC_hg19_v1_chr11_-_45939595 AF118240 NM_004813 NM_057174	-46999	-	TSC_hg19_v1_chr11_-_46142986 AK023258 NM_001101802 NM_016621	156378	-	TSC_hg19_v1_chr11_+_46299212 AK314072 NM_052854	312586	+	BC014097 TSC_hg19_v1_chr11_+_46299557 BC015781 AB063321	312941	+	BC037291|GYLTL1B|120071|glycosyltransferase-like 1B##AK055829|GYLTL1B|120071|glycosyltransferase-like 1B##AK096021|GYLTL1B|120071|glycosyltransferase-like 1B##NM_152312|GYLTL1B|120071|glycosyltransferase-like 1B##AF118240|PEX16|9409|peroxisomal biogenesis factor 16##NM_004813|PEX16|9409|peroxisomal biogenesis factor 16##NM_057174|PEX16|9409|peroxisomal biogenesis factor 16##AK023258|PHF21A|51317|PHD finger protein 21A##NM_001101802|PHF21A|51317|PHD finger protein 21A##NM_016621|PHF21A|51317|PHD finger protein 21A##AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	0.972306	CTCF.p2:2:0.972
chr1	245316419	245316539	reg1014640.p1	9.655	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-182796	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-182849	+	AK090927 AX746687 TSC_hg19_v1_chr1_+_245133411	-183117	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	1829	+	AK024733 NM_022743	1264232	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	1354075	-	AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK090927|EFCAB2|84288|EF-hand calcium binding domain 2##AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3	0.559965	CTCF.p2:-10:0.560
chr13	25611507	25611609	reg1012166.p1	9.655	+	TSC_hg19_v1_chr13_-_25497054 NM_018451	-114489	-	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	-114589	-	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	-273239	+	NM_030979 AL136900 AK313336 BC045608 BC027617 AF132026 DQ892103 DQ895297	58747	+	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	134102	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	134259	-	NM_018451|CENPJ|55835|centromere protein J##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##NM_030979|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AL136900|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK313336|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC045608|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC027617|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AF132026|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ892103|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ895297|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A	0.984598	CTCF.p2:-11:0.985
chr14	70540805	70540909	reg1010704.p1	9.655	+	NM_001034852 NM_022137 TSC_hg19_v1_chr14_+_70346132 AK289988 AK313063 AJ249900 BC011548 BC008608	-194728	+	CU687020 HQ258189 BC074724 BC126298 BC136355 AY544127 BC069822 BC069799 L21893 AK314028 NM_003049	-276919	-	AF070562 TSC_hg19_v1_chr14_+_70236305	-304570	+	AK096553 AJ745101 AJ745102 BC114217 NM_182936 AK122728 BC142969 NM_001130417	6035	-	BC036783 BX248763 TSC_hg19_v1_chr14_-_70655669 AF510501 AF510502 AF510503 NM_033262 NM_058240 NM_182932 NM_183002	114830	-	CR457199 AB528661 CU674840 BC001702 TSC_hg19_v1_chr14_-_70826389	285489	-	NM_001034852|SMOC1|64093|SPARC related modular calcium binding 1##NM_022137|SMOC1|64093|SPARC related modular calcium binding 1##AK289988|SMOC1|64093|SPARC related modular calcium binding 1##AK313063|SMOC1|64093|SPARC related modular calcium binding 1##AJ249900|SMOC1|64093|SPARC related modular calcium binding 1##BC011548|SMOC1|64093|SPARC related modular calcium binding 1##BC008608|SMOC1|64093|SPARC related modular calcium binding 1##HQ258189|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC074724|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC126298|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC136355|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AY544127|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC069822|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC069799|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##L21893|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AK314028|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##NM_003049|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AF070562|SRSF5|6430|serine/arginine-rich splicing factor 5##AK096553|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745101|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745102|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC114217|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182936|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AK122728|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC142969|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_001130417|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC036783|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BX248763|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510501|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510502|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510503|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_033262|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_058240|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182932|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_183002|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##CR457199|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC001702|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	0.999038	CTCF.p2:0:0.999
chr2	36891380	36891494	reg1013619.p1	9.655	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	-66155	-	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	-308035	+	TSC_hg19_v1_chr2_+_36582920 AY358371	-308475	+	NM_001177969 NM_001177970 NM_001177971 NM_001177972 NM_053276 AK299426 TSC_hg19_v1_chr2_+_36923849	32409	+	TSC_hg19_v1_chr2_+_36923944 BC061519 AK056772 AK292149 AY358338 AL832679 AF063833 BC128260	32523	+	TSC_hg19_v1_chr2_-_37076016 BC015406	184593	-	AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_001177969|VIT|5212|vitrin##NM_001177970|VIT|5212|vitrin##NM_001177971|VIT|5212|vitrin##NM_001177972|VIT|5212|vitrin##NM_053276|VIT|5212|vitrin##AK299426|VIT|5212|vitrin##BC061519|VIT|5212|vitrin##AK056772|VIT|5212|vitrin##AK292149|VIT|5212|vitrin##AY358338|VIT|5212|vitrin##AL832679|VIT|5212|vitrin##AF063833|VIT|5212|vitrin##BC128260|VIT|5212|vitrin##BC015406|STRN|6801|striatin, calmodulin binding protein	0.959166	CTCF.p2:11:0.959
chr8	133501934	133502053	reg1010972.p1	9.655	+	NM_004519 TSC_hg19_v1_chr8_-_133493146	-8916	-	TSC_hg19_v1_chr8_-_133492751 AB527350 BC128576	-9206	-	AB208890 AF033347 TSC_hg19_v1_chr8_-_133492689	-9370	-	TSC_hg19_v1_chr8_-_133687792 BC027589 BC047286 NM_012472 AK313107	185834	-	BC062592 AK057631 BC105783 NM_001145153 NM_144649	270867	-	TSC_hg19_v1_chr8_+_133787606 NM_016018 NM_032205 NM_198513	285590	+	NM_004519|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##BC027589|LRRC6|23639|leucine rich repeat containing 6##BC047286|LRRC6|23639|leucine rich repeat containing 6##NM_012472|LRRC6|23639|leucine rich repeat containing 6##AK313107|LRRC6|23639|leucine rich repeat containing 6##BC062592|TMEM71|137835|transmembrane protein 71##AK057631|TMEM71|137835|transmembrane protein 71##BC105783|TMEM71|137835|transmembrane protein 71##NM_001145153|TMEM71|137835|transmembrane protein 71##NM_144649|TMEM71|137835|transmembrane protein 71##NM_016018|PHF20L1|51105|PHD finger protein 20-like 1##NM_032205|PHF20L1|51105|PHD finger protein 20-like 1##NM_198513|PHF20L1|51105|PHD finger protein 20-like 1	0.479288	CTCF.p2:-6:0.467
chrX	148593920	148594052	reg1012101.p1	9.655	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	-7212	-	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-793374	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-1011798	+	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	28444	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	28608	+	AK300334 NM_001171909	32079	+	AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A##AK300334|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171909|CXorf40A|91966|chromosome X open reading frame 40A	0.567448	CTCF.p2:-8:0.567
chr15	25939165	25939290	reg1014514.p1	9.654	+	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	-255049	-	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	-255126	-	L07557 NM_130838	-288578	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	169126	-	AB051358 TSC_hg19_v1_chr15_-_26108932	169673	-	AK295167 NM_001191321 TSC_hg19_v1_chr15_-_26874238 BC038837	935053	-	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##AB051358|ATP10A|57194|ATPase, class V, type 10A##AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	0.795929	CTCF.p2:-1:0.796
chr5	5881585	5881693	reg1011662.p1	9.654	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	-458730	+	TSC_hg19_v1_chr5_+_5422777 AK126937	-458864	+	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	-741128	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	497011	-	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	567214	+	TSC_hg19_v1_chr5_+_6449114 AK057805	567550	+	AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1	0.0	
chr12	57518195	57518298	reg1012168.p1	9.653	+	TSC_hg19_v1_chr12_-_57505177 NM_001178078 NM_001178080 NM_001178081 NM_003153	-13049	-	TSC_hg19_v1_chr12_-_57505144 AK290431 AK299094 AK316142 BC004973 BC005823	-13101	-	TSC_hg19_v1_chr12_-_57505013 AK316236 BC075852 AK298721 AK312471 U16031	-13241	-	TSC_hg19_v1_chr12_+_57522265 BC052593 BC072015 NM_002332 X13916	4036	+	TSC_hg19_v1_chr12_+_57522452 BC045107	4217	+	AY358614 NM_007224 TSC_hg19_v1_chr12_+_57610601 BC036679 AK094231 AK290949 BC053581 CU690992	92418	+	NM_001178078|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178080|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178081|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_003153|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK290431|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK299094|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK316142|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC004973|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC005823|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK316236|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC075852|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK298721|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK312471|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##U16031|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC052593|LRP1|4035|low density lipoprotein receptor-related protein 1##BC072015|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_002332|LRP1|4035|low density lipoprotein receptor-related protein 1##X13916|LRP1|4035|low density lipoprotein receptor-related protein 1##BC045107|LRP1|4035|low density lipoprotein receptor-related protein 1##AY358614|NXPH4|11247|neurexophilin 4##NM_007224|NXPH4|11247|neurexophilin 4##BC036679|NXPH4|11247|neurexophilin 4##AK094231|NXPH4|11247|neurexophilin 4##AK290949|NXPH4|11247|neurexophilin 4##BC053581|NXPH4|11247|neurexophilin 4	0.99724	CTCF.p2:-11:0.997
chr14	100769593	100769710	reg1013101.p1	9.653	+	TSC_hg19_v1_chr14_+_100705474 BC037308 M76541 BC020324 BC065366 AB464361 DQ891638 EU176600 CU691478	-64145	+	TSC_hg19_v1_chr14_+_100705309 M77698	-64339	+	NM_003403 TSC_hg19_v1_chr14_+_100705177	-64509	+	TSC_hg19_v1_chr14_-_100772779 AK096294 AK123821 AK310069 BC142945 AK172788 BX247983 NM_001039355	3188	-	AK092001 AX747302 TSC_hg19_v1_chr14_+_100789675 AB073385 AY569438 AY570298 NM_207117 BX248260 BC137253 BC137254 BC144549	20035	+	X59892 TSC_hg19_v1_chr14_-_100841685 BC095453 M61715	72040	-	BC037308|YY1|7528|YY1 transcription factor##M76541|YY1|7528|YY1 transcription factor##BC020324|YY1|7528|YY1 transcription factor##BC065366|YY1|7528|YY1 transcription factor##DQ891638|YY1|7528|YY1 transcription factor##EU176600|YY1|7528|YY1 transcription factor##M77698|YY1|7528|YY1 transcription factor##NM_003403|YY1|7528|YY1 transcription factor##AK096294|SLC25A29|123096|solute carrier family 25, member 29##AK123821|SLC25A29|123096|solute carrier family 25, member 29##AK310069|SLC25A29|123096|solute carrier family 25, member 29##AK172788|SLC25A29|123096|solute carrier family 25, member 29##BX247983|SLC25A29|123096|solute carrier family 25, member 29##NM_001039355|SLC25A29|123096|solute carrier family 25, member 29##AK092001|SLC25A47|283600|solute carrier family 25, member 47##AB073385|SLC25A47|283600|solute carrier family 25, member 47##AY569438|SLC25A47|283600|solute carrier family 25, member 47##AY570298|SLC25A47|283600|solute carrier family 25, member 47##NM_207117|SLC25A47|283600|solute carrier family 25, member 47##BX248260|SLC25A47|283600|solute carrier family 25, member 47##BC137253|SLC25A47|283600|solute carrier family 25, member 47##BC137254|SLC25A47|283600|solute carrier family 25, member 47##BC144549|SLC25A47|283600|solute carrier family 25, member 47##X59892|WARS|7453|tryptophanyl-tRNA synthetase##BC095453|WARS|7453|tryptophanyl-tRNA synthetase##M61715|WARS|7453|tryptophanyl-tRNA synthetase	0.220879	CTCF.p2:-18:0.221
chr17	42477733	42477853	reg1013186.p2	9.653	+	AB528003 J02764 BC117443 BC126442 AK297155 AK315335 M34480 NM_000419	-10937	-	TSC_hg19_v1_chr17_-_42441222 BC030200 NM_198475	-36571	-	TSC_hg19_v1_chr17_+_42422669 AK000607 AK222522 AK296090 X62320 AK303830	-55117	+	TSC_hg19_v1_chr17_-_42580760 BC136629 BC144323 AK025600 BC140010	102971	-	TSC_hg19_v1_chr17_-_42580958 NM_001002909	103179	-	TSC_hg19_v1_chr17_+_42634696 NM_001466 BC052266 L37882 BC113402 BC113404 AB017364 AB590852	157033	+	J02764|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC117443|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC126442|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK297155|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK315335|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##M34480|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##NM_000419|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC030200|FAM171A2|284069|family with sequence similarity 171, member A2##NM_198475|FAM171A2|284069|family with sequence similarity 171, member A2##AK000607|GRN|2896|granulin##AK222522|GRN|2896|granulin##AK296090|GRN|2896|granulin##X62320|GRN|2896|granulin##AK303830|GRN|2896|granulin##BC136629|GPATCH8|23131|G patch domain containing 8##BC144323|GPATCH8|23131|G patch domain containing 8##AK025600|GPATCH8|23131|G patch domain containing 8##BC140010|GPATCH8|23131|G patch domain containing 8##NM_001002909|GPATCH8|23131|G patch domain containing 8##NM_001466|FZD2|2535|frizzled family receptor 2##BC052266|FZD2|2535|frizzled family receptor 2##L37882|FZD2|2535|frizzled family receptor 2##BC113402|FZD2|2535|frizzled family receptor 2##BC113404|FZD2|2535|frizzled family receptor 2##AB017364|FZD2|2535|frizzled family receptor 2	0.994172	CTCF.p2:5:0.994
chr4	27693843	27693966	reg1014374.p1	9.653	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-831364	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-1108224	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-1201919	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3028095	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3028290	+	TSC_hg19_v1_chr4_+_30722465 AB006756	3028555	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.931868	CTCF.p2:5:0.932
chr18	41710460	41710603	reg1014442.p1	9.651	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-853102	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-1014962	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-2175298	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	549583	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	550337	+	NM_001242692 AK292422	1082421	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.951882	CTCF.p2:-20:0.952
chr22	37868574	37868670	reg1012371.p1	9.651	+	TSC_hg19_v1_chr22_-_37823515 NM_052906	-45094	-	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	-190046	+	TSC_hg19_v1_chr22_+_37678548 AK304453 BC017780	-190085	+	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	13723	-	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	46685	-	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	87851	+	NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2##BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4##AK304453|CYTH4|27128|cytohesin 4##BC017780|CYTH4|27128|cytohesin 4##CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10##NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1	0.997747	CTCF.p2:-2:0.998
chr4	55189142	55189236	reg1011322.p1	9.651	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-93725	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-93909	+	AB028838 EU596451 NM_133267	-222967	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	334945	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	802565	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	1023227	+	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB028838|GSX2|170825|GS homeobox 2##EU596451|GSX2|170825|GS homeobox 2##NM_133267|GSX2|170825|GS homeobox 2##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3	0.998014	CTCF.p2:-6:0.998
chr2	217381607	217381729	reg1012093.p1	9.650	+	NM_000998 TSC_hg19_v1_chr2_+_217363566 AK289472 BC016748 BC067789 L22154 AK023419 AK291857 BC063476 L06499 BC014262 BC082239 BC047872	-18115	+	TSC_hg19_v1_chr2_+_217277487 NM_001127207 AF432223 BC043341	-104190	+	NM_014140 TSC_hg19_v1_chr2_+_217277188 AK023780	-104470	+	TSC_hg19_v1_chr2_+_217498142 NM_000597 X16302 BC071967 AB209509 BC004312 BC009902 BC012769 M35410	116468	+	TSC_hg19_v1_chr2_+_217498216 DQ893450 EU176752	116630	+	L27560 AF147308 TSC_hg19_v1_chr2_-_217540846	159116	-	NM_000998|RPL37A|6168|ribosomal protein L37a##AK289472|RPL37A|6168|ribosomal protein L37a##BC016748|RPL37A|6168|ribosomal protein L37a##BC067789|RPL37A|6168|ribosomal protein L37a##L22154|RPL37A|6168|ribosomal protein L37a##AK023419|RPL37A|6168|ribosomal protein L37a##AK291857|RPL37A|6168|ribosomal protein L37a##BC063476|RPL37A|6168|ribosomal protein L37a##L06499|RPL37A|6168|ribosomal protein L37a##BC014262|RPL37A|6168|ribosomal protein L37a##BC082239|RPL37A|6168|ribosomal protein L37a##BC047872|RPL37A|6168|ribosomal protein L37a##NM_001127207|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AF432223|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##BC043341|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##NM_014140|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AK023780|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##DQ893450|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##EU176752|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##L27560|IGFBP5|3488|insulin-like growth factor binding protein 5##AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5	0.326964	CTCF.p2:-2:0.327
chr3	34021938	34022059	reg1014183.p1	9.650	+	TSC_hg19_v1_chr3_+_33840125 AF250394 GQ131806 AB384596 CU676494 CU686637 BT007367	-181827	+	TSC_hg19_v1_chr3_+_33840120 AF151793 BC020066	-181891	+	TSC_hg19_v1_chr3_+_33840081 BC068454 AF349951	-181915	+	TSC_hg19_v1_chr3_+_35681016 BC041385 AK057559	1659103	+	BC051828 NM_016300	1661850	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	1699198	+	AF250394|PDCD6IP|10015|programmed cell death 6 interacting protein##GQ131806|PDCD6IP|10015|programmed cell death 6 interacting protein##BT007367|PDCD6IP|10015|programmed cell death 6 interacting protein##AF151793|PDCD6IP|10015|programmed cell death 6 interacting protein##BC020066|PDCD6IP|10015|programmed cell death 6 interacting protein##BC068454|PDCD6IP|10015|programmed cell death 6 interacting protein##AF349951|PDCD6IP|10015|programmed cell death 6 interacting protein##BC041385|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK057559|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	0.149129	
chr4	6332899	6333006	reg1013501.p1	9.650	+	TSC_hg19_v1_chr4_+_6271608 AK295986 BC030130 AK312897	-61326	+	Y18064 TSC_hg19_v1_chr4_+_6271588	-61358	+	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	-61384	+	AB590545 AK093115 AX747932 NM_181876	50632	-	BC032954 NM_001206996	89892	-	AF086924 TSC_hg19_v1_chr4_-_6474082	141093	-	AK295986|WFS1|7466|Wolfram syndrome 1 (wolframin)##BC030130|WFS1|7466|Wolfram syndrome 1 (wolframin)##AK312897|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##AK093115|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##NM_181876|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##BC032954|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##NM_001206996|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##AF086924|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma	0.998383	CTCF.p2:3:0.998
chr6_cox_hap2	4397236	4397353	reg1013608.p1	9.650	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.003703	CTCF.p2:13:0.960
chr1	209921070	209921204	reg1007183.p1	9.649	+	NM_005525 TSC_hg19_v1_chr1_+_209878192 BC012593 AK313973 AB590223 DQ892912 EU176721	-42926	+	NM_001206741 NM_181755	-61613	+	TSC_hg19_v1_chr1_+_209848994 BT007101 CR542179 CR542193 DQ894610 EU176279	-72126	+	TSC_hg19_v1_chr1_+_209929480 AK122792 NM_025228 BX648450 BC110302 AK300555 AK312755 AK225762 AL049667	8313	+	TSC_hg19_v1_chr1_+_209941909 AK126139	20779	+	TSC_hg19_v1_chr1_-_209957872 BC039719 NM_152485 AK057807	36750	-	NM_005525|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##BC012593|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##AK313973|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##DQ892912|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##EU176721|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##NM_001206741|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##NM_181755|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##BT007101|G0S2|50486|G0/G1switch 2##CR542179|G0S2|50486|G0/G1switch 2##CR542193|G0S2|50486|G0/G1switch 2##DQ894610|G0S2|50486|G0/G1switch 2##EU176279|G0S2|50486|G0/G1switch 2##AK122792|TRAF3IP3|80342|TRAF3 interacting protein 3##NM_025228|TRAF3IP3|80342|TRAF3 interacting protein 3##BX648450|TRAF3IP3|80342|TRAF3 interacting protein 3##BC110302|TRAF3IP3|80342|TRAF3 interacting protein 3##AK300555|TRAF3IP3|80342|TRAF3 interacting protein 3##AK312755|TRAF3IP3|80342|TRAF3 interacting protein 3##AK225762|TRAF3IP3|80342|TRAF3 interacting protein 3##AL049667|TRAF3IP3|80342|TRAF3 interacting protein 3##AK126139|TRAF3IP3|80342|TRAF3 interacting protein 3##BC039719|C1orf74|148304|chromosome 1 open reading frame 74##NM_152485|C1orf74|148304|chromosome 1 open reading frame 74##AK057807|C1orf74|148304|chromosome 1 open reading frame 74	0.69205	CTCF.p2:0:0.692
chr19	588224	588327	reg1012110.p2	9.649	+	TSC_hg19_v1_chr19_+_572595 X64364 AY358113 BC009040 AB085790 AK296858 AK297880 D28441 D45131 AB072923 L10240 AB091680 M87879 AB463434	-15613	+	TSC_hg19_v1_chr19_+_572571 AF548371	-15704	+	TSC_hg19_v1_chr19_+_572564 NM_001728 NM_198589 AK302231	-15790	+	TSC_hg19_v1_chr19_+_589888 AJ012582 NM_001194 AF065164 DQ854815 AB527443	1638	+	TSC_hg19_v1_chr19_-_633520 AK307525 BC030829	45223	-	TSC_hg19_v1_chr19_-_633538 AK225723 AK225865 BC098387 U75370	45268	-	X64364|BSG|682|basigin (Ok blood group)##AY358113|BSG|682|basigin (Ok blood group)##BC009040|BSG|682|basigin (Ok blood group)##AB085790|BSG|682|basigin (Ok blood group)##AK296858|BSG|682|basigin (Ok blood group)##AK297880|BSG|682|basigin (Ok blood group)##D28441|BSG|682|basigin (Ok blood group)##D45131|BSG|682|basigin (Ok blood group)##AB072923|BSG|682|basigin (Ok blood group)##L10240|BSG|682|basigin (Ok blood group)##AB091680|BSG|682|basigin (Ok blood group)##M87879|BSG|682|basigin (Ok blood group)##AF548371|BSG|682|basigin (Ok blood group)##NM_001728|BSG|682|basigin (Ok blood group)##NM_198589|BSG|682|basigin (Ok blood group)##AK302231|BSG|682|basigin (Ok blood group)##AJ012582|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##NM_001194|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##AF065164|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##DQ854815|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##AK307525|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC030829|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##AK225723|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##AK225865|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC098387|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##U75370|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)	0.0	
chr22	44280978	44281091	reg1011584.p1	9.649	+	AK295399 AF115311 AL590119 AB587375 CR456588 CU013188 CU013476 DQ892373 DQ895583 CU688978 CU692628 BC022459 TSC_hg19_v1_chr22_-_44258315 AF176342 AF251263 AK313048 AK294622 AF188698 BC028171 NM_014351 BC030665	-22731	-	BC039315 TSC_hg19_v1_chr22_-_44208121 AK296679 AK292498 AK292411 AK058069 NM_022785 NM_198856	-72893	-	TSC_hg19_v1_chr22_+_43808109 AK289774	-472917	+	BC104839 BC104843 BC143696 BC031820 AK056648 AK127172 NM_001177675 NM_138814	6815	-	AK025665 AL138578 NM_025225 TSC_hg19_v1_chr22_+_44319651 AK308995	38610	+	TSC_hg19_v1_chr22_+_44319684 AK123806 AK315166	38645	+	AK295399|SULT4A1|25830|sulfotransferase family 4A, member 1##AF115311|SULT4A1|25830|sulfotransferase family 4A, member 1##AL590119|SULT4A1|25830|sulfotransferase family 4A, member 1##CR456588|SULT4A1|25830|sulfotransferase family 4A, member 1##CU013188|SULT4A1|25830|sulfotransferase family 4A, member 1##CU013476|SULT4A1|25830|sulfotransferase family 4A, member 1##DQ892373|SULT4A1|25830|sulfotransferase family 4A, member 1##DQ895583|SULT4A1|25830|sulfotransferase family 4A, member 1##BC022459|SULT4A1|25830|sulfotransferase family 4A, member 1##AF176342|SULT4A1|25830|sulfotransferase family 4A, member 1##AF251263|SULT4A1|25830|sulfotransferase family 4A, member 1##AK313048|SULT4A1|25830|sulfotransferase family 4A, member 1##AK294622|SULT4A1|25830|sulfotransferase family 4A, member 1##AF188698|SULT4A1|25830|sulfotransferase family 4A, member 1##BC028171|SULT4A1|25830|sulfotransferase family 4A, member 1##NM_014351|SULT4A1|25830|sulfotransferase family 4A, member 1##BC030665|SULT4A1|25830|sulfotransferase family 4A, member 1##BC039315|EFCAB6|64800|EF-hand calcium binding domain 6##AK296679|EFCAB6|64800|EF-hand calcium binding domain 6##AK292498|EFCAB6|64800|EF-hand calcium binding domain 6##AK292411|EFCAB6|64800|EF-hand calcium binding domain 6##AK058069|EFCAB6|64800|EF-hand calcium binding domain 6##NM_022785|EFCAB6|64800|EF-hand calcium binding domain 6##NM_198856|EFCAB6|64800|EF-hand calcium binding domain 6##AK289774|MPPED1|758|metallophosphoesterase domain containing 1##BC104839|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC104843|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC143696|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC031820|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK056648|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK127172|PNPLA5|150379|patatin-like phospholipase domain containing 5##NM_001177675|PNPLA5|150379|patatin-like phospholipase domain containing 5##NM_138814|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK025665|PNPLA3|80339|patatin-like phospholipase domain containing 3##AL138578|PNPLA3|80339|patatin-like phospholipase domain containing 3##NM_025225|PNPLA3|80339|patatin-like phospholipase domain containing 3##AK123806|PNPLA3|80339|patatin-like phospholipase domain containing 3##AK315166|PNPLA3|80339|patatin-like phospholipase domain containing 3	0.765569	CTCF.p2:25:0.766
chr9	127534403	127534534	reg1011613.p3	9.649	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	-958	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	-113764	+	TSC_hg19_v1_chr9_-_127269711 BC032501 NM_004959	-264764	-	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	5032	+	BC150645 BC171828 BC171830 BC171837 BC127949 TSC_hg19_v1_chr9_+_127615749 NM_001045476	81256	+	TSC_hg19_v1_chr9_-_127624226 BC071915 U12465 BC000348 AK291072 BC010919 D28448 NM_007209	89749	-	HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A##BC150645|WDR38|401551|WD repeat domain 38##BC171828|WDR38|401551|WD repeat domain 38##BC171830|WDR38|401551|WD repeat domain 38##BC171837|WDR38|401551|WD repeat domain 38##BC127949|WDR38|401551|WD repeat domain 38##NM_001045476|WDR38|401551|WD repeat domain 38##BC071915|RPL35|11224|ribosomal protein L35##U12465|RPL35|11224|ribosomal protein L35##BC000348|RPL35|11224|ribosomal protein L35##AK291072|RPL35|11224|ribosomal protein L35##BC010919|RPL35|11224|ribosomal protein L35##D28448|RPL35|11224|ribosomal protein L35##NM_007209|RPL35|11224|ribosomal protein L35	0.998764	CTCF.p2:10:0.999
chr11	122734566	122734684	reg1012229.p1	9.648	+	BC070266 AK313578 AF001622 NM_019604	-25396	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	-208078	+	BC130361 BC130363 AF303179 NM_001001786	-747764	-	AK097534 BC068507 NM_024806 NM_199124	18806	+	AB231738 NM_001098169	117731	-	AB034951 BC016179 BC016660 BC019816 AF352832 TSC_hg19_v1_chr11_-_122932842 AK222628 AK222785 AK096100 AK129885 AK303935	198199	-	BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63##AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox##AB034951|HSPA8|3312|heat shock 70kDa protein 8##BC016179|HSPA8|3312|heat shock 70kDa protein 8##BC016660|HSPA8|3312|heat shock 70kDa protein 8##BC019816|HSPA8|3312|heat shock 70kDa protein 8##AF352832|HSPA8|3312|heat shock 70kDa protein 8##AK222628|HSPA8|3312|heat shock 70kDa protein 8##AK222785|HSPA8|3312|heat shock 70kDa protein 8##AK096100|HSPA8|3312|heat shock 70kDa protein 8##AK129885|HSPA8|3312|heat shock 70kDa protein 8##AK303935|HSPA8|3312|heat shock 70kDa protein 8	0.0	
chr16	16624756	16624902	reg1013940.p1	9.648	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-298299	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-298341	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-298347	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	939976	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1948562	-	TSC_hg19_v1_chr16_-_18798077 AK127316	2173267	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.994613	CTCF.p2:9:0.995
chr2	166555243	166555348	reg1011511.p1	9.648	+	NM_024969 AK056655 TSC_hg19_v1_chr2_+_166428851	-126446	+	AK126129 NM_001172173 TSC_hg19_v1_chr2_+_166326207	-229111	+	NM_001040143	-403013	+	AK313389 TSC_hg19_v1_chr2_-_166650651	95310	-	BC056246 TSC_hg19_v1_chr2_-_166650713	95432	-	TSC_hg19_v1_chr2_-_166650773 NM_004482	95491	-	NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##NM_001040143|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##AK313389|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##BC056246|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##NM_004482|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)	0.408001	CTCF.p2:26:0.408
chr6	132805399	132805530	reg1012179.p1	9.648	+	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	-82848	-	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	-533050	-	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-676203	+	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	28786	-	BC069083 NM_175057 AY183469	53963	+	AB529265 AY183468 BC069166 NM_053278	68366	+	DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7##BC069083|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##NM_175057|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183469|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183468|TAAR8|83551|trace amine associated receptor 8##BC069166|TAAR8|83551|trace amine associated receptor 8##NM_053278|TAAR8|83551|trace amine associated receptor 8	0.995946	CTCF.p2:25:0.996
chr6	76077924	76078054	reg1012461.p2	9.647	+	TSC_hg19_v1_chr6_+_75994737 EF565086	-83234	+	NM_001143958 NM_018247 TSC_hg19_v1_chr6_-_75994700	-83319	-	TSC_hg19_v1_chr6_-_75994502 AK001718 AK295567 AK293225	-83483	-	AK290232 BC136443 BC136444 AL832009 AK097021 BC110829 BX647178 NM_015687 TSC_hg19_v1_chr6_-_76203497	125387	-	AK126921 TSC_hg19_v1_chr6_+_76311581	233416	+	TSC_hg19_v1_chr6_+_76311617 NM_001100409 NM_015571	233630	+	EF565086|LOC100506804|100506804|uncharacterized LOC100506804##NM_001143958|TMEM30A|55754|transmembrane protein 30A##NM_018247|TMEM30A|55754|transmembrane protein 30A##AK001718|TMEM30A|55754|transmembrane protein 30A##AK295567|TMEM30A|55754|transmembrane protein 30A##AK293225|TMEM30A|55754|transmembrane protein 30A##AK290232|FILIP1|27145|filamin A interacting protein 1##BC136443|FILIP1|27145|filamin A interacting protein 1##BC136444|FILIP1|27145|filamin A interacting protein 1##AL832009|FILIP1|27145|filamin A interacting protein 1##AK097021|FILIP1|27145|filamin A interacting protein 1##BX647178|FILIP1|27145|filamin A interacting protein 1##NM_015687|FILIP1|27145|filamin A interacting protein 1##AK126921|SENP6|26054|SUMO1/sentrin specific peptidase 6##NM_001100409|SENP6|26054|SUMO1/sentrin specific peptidase 6##NM_015571|SENP6|26054|SUMO1/sentrin specific peptidase 6	0.037679	
chr4	104936964	104937107	reg1011869.p2	9.645	+	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-296135	-	AB527246 AB209996 TSC_hg19_v1_chr4_-_104119535 AK290362 NM_001813 Z15005	-817515	-	AK128463 TSC_hg19_v1_chr4_-_104020987 AF164790 AK023323 AK290160 AK291335 AK300626 BC037277 BC095414 AY358841 BC001953 NM_020139	-916035	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	475447	-	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	479018	-	BX640738 NM_017628	1129996	+	BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##AB209996|CENPE|1062|centromere protein E, 312kDa##AK290362|CENPE|1062|centromere protein E, 312kDa##NM_001813|CENPE|1062|centromere protein E, 312kDa##Z15005|CENPE|1062|centromere protein E, 312kDa##AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##AK127778|CXXC4|80319|CXXC finger protein 4##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2	0.319695	CTCF.p2:-2:0.320
chr8	20292927	20293060	reg1014058.p1	9.645	+	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	-180247	-	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	-238071	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	-238100	+	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	1352799	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	1353373	-	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	1478172	-	AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa	0.999486	CTCF.p2:-23:0.999
chr15	51573703	51573823	reg1013798.p1	9.644	+	AY517501 NM_207381	-176291	-	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	-186913	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	-372836	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	57001	-	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	60031	+	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	341210	-	AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2	0.515229	CTCF.p2:-14:0.515
chr7	102356212	102356355	reg1014008.p1	9.644	+	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	-44163	-	AK302217 NM_001031618 NM_001166339	-65512	+	EU341824 NM_001114403 AK296589	-73007	-	TSC_hg19_v1_chr7_+_102389473 NM_001145268 NM_001145269 BC029175 AK297455 AK298753 AK054745 DQ893359 DQ896678	33207	+	NM_001031692 NM_005824 TSC_hg19_v1_chr7_+_102553446 AK226021 AK225701 U32907 AK290305 BC027903 AY358889	197149	+	AK097537 NM_145032	358731	-	BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##EU341824|UPK3BL|100134938|uroplakin 3B-like##NM_001114403|UPK3BL|100134938|uroplakin 3B-like##NM_001145268|FAM185A|222234|family with sequence similarity 185, member A##NM_001145269|FAM185A|222234|family with sequence similarity 185, member A##BC029175|FAM185A|222234|family with sequence similarity 185, member A##AK297455|FAM185A|222234|family with sequence similarity 185, member A##AK298753|FAM185A|222234|family with sequence similarity 185, member A##AK054745|FAM185A|222234|family with sequence similarity 185, member A##DQ893359|FAM185A|222234|family with sequence similarity 185, member A##DQ896678|FAM185A|222234|family with sequence similarity 185, member A##NM_001031692|LRRC17|10234|leucine rich repeat containing 17##NM_005824|LRRC17|10234|leucine rich repeat containing 17##AK226021|LRRC17|10234|leucine rich repeat containing 17##AK225701|LRRC17|10234|leucine rich repeat containing 17##U32907|LRRC17|10234|leucine rich repeat containing 17##AK290305|LRRC17|10234|leucine rich repeat containing 17##BC027903|LRRC17|10234|leucine rich repeat containing 17##AY358889|LRRC17|10234|leucine rich repeat containing 17##AK097537|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_145032|FBXL13|222235|F-box and leucine-rich repeat protein 13	0.0	
chrX	2953910	2954033	reg1011249.p1	9.644	+	AB527111 AY875940 NM_001011719	-29318	+	AK293648 TSC_hg19_v1_chrX_-_2886287	-67681	-	BC130438 AK223199 TSC_hg19_v1_chrX_-_2882330 X83573 AK313093 AK301004 AK223183 NM_000047	-71581	-	NM_001201538	4303	+	BC022389 NM_001201539	5540	+	NM_004042 X97868	30885	+	AY875940|ARSH|347527|arylsulfatase family, member H##NM_001011719|ARSH|347527|arylsulfatase family, member H##AK293648|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)##BC130438|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)##AK223199|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)##X83573|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)##AK313093|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)##AK301004|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)##AK223183|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)##NM_000047|ARSE|415|arylsulfatase E (chondrodysplasia punctata 1)##NM_001201538|ARSF|416|arylsulfatase F##BC022389|ARSF|416|arylsulfatase F##NM_001201539|ARSF|416|arylsulfatase F##NM_004042|ARSF|416|arylsulfatase F##X97868|ARSF|416|arylsulfatase F	0.993523	CTCF.p2:-5:0.994
chr17	33866517	33866626	reg1012075.p1	9.643	+	NM_001195790	-51814	-	TSC_hg19_v1_chr17_-_33775787 CR749630 AK056514 AL832726 AK122750 NM_144682	-90760	-	AK001122 BC035605 NM_018042	-107041	-	BC140847 BC157877 BC157879 NM_001129820	18536	-	BC031085 AK312635 BC015751 U91521 NM_000286	39034	-	TSC_hg19_v1_chr17_+_33914281 NM_001030006 NM_001282 M34175 AK295667	47719	+	NM_001195790|SLFN12L|100506736|schlafen family member 12-like##CR749630|SLFN13|146857|schlafen family member 13##AK056514|SLFN13|146857|schlafen family member 13##AL832726|SLFN13|146857|schlafen family member 13##AK122750|SLFN13|146857|schlafen family member 13##NM_144682|SLFN13|146857|schlafen family member 13##AK001122|SLFN12|55106|schlafen family member 12##BC035605|SLFN12|55106|schlafen family member 12##NM_018042|SLFN12|55106|schlafen family member 12##BC140847|SLFN14|342618|schlafen family member 14##BC157877|SLFN14|342618|schlafen family member 14##BC157879|SLFN14|342618|schlafen family member 14##NM_001129820|SLFN14|342618|schlafen family member 14##BC031085|PEX12|5193|peroxisomal biogenesis factor 12##AK312635|PEX12|5193|peroxisomal biogenesis factor 12##BC015751|PEX12|5193|peroxisomal biogenesis factor 12##U91521|PEX12|5193|peroxisomal biogenesis factor 12##NM_000286|PEX12|5193|peroxisomal biogenesis factor 12##NM_001030006|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##NM_001282|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##M34175|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AK295667|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit	0.993614	CTCF.p2:9:0.994
chr22	38626271	38626372	reg1012367.p1	9.643	+	NM_001161573	-27295	+	BC015037 TSC_hg19_v1_chr22_+_38598094 AB025247	-28235	+	NM_001161572 NM_001161574 NM_012323 TSC_hg19_v1_chr22_+_38597996 AK002001 BC067751 AK300932 AJ010857	-28344	+	NM_001195071	42348	-	TSC_hg19_v1_chr22_-_38668943 CR749859	42624	-	TSC_hg19_v1_chr22_-_38669012 BC015489 AB097053 AK309071 AK292652 NM_001195072 NM_012264	42687	-	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001195071|TMEM184B|25829|transmembrane protein 184B##CR749859|TMEM184B|25829|transmembrane protein 184B##BC015489|TMEM184B|25829|transmembrane protein 184B##AB097053|TMEM184B|25829|transmembrane protein 184B##AK309071|TMEM184B|25829|transmembrane protein 184B##AK292652|TMEM184B|25829|transmembrane protein 184B##NM_001195072|TMEM184B|25829|transmembrane protein 184B##NM_012264|TMEM184B|25829|transmembrane protein 184B	0.064475	
chr8	124077974	124078099	reg1012811.p1	9.643	+	TSC_hg19_v1_chr8_-_124054594 NM_001134671 NM_024295	-23417	-	AY358818 TSC_hg19_v1_chr8_-_124054540 AK303826	-23496	-	BC002457 TSC_hg19_v1_chr8_-_124054522	-23529	-	TSC_hg19_v1_chr8_+_124084927 AK056434 NM_001145088 NM_145647	6877	+	TSC_hg19_v1_chr8_+_124084951 BC101724 BC111954 BC143523 BC143525 BC105800 AK094612	6934	+	NM_032899 NM_207006 BC052300 TSC_hg19_v1_chr8_+_124194829	116754	+	NM_001134671|DERL1|79139|Der1-like domain family, member 1##NM_024295|DERL1|79139|Der1-like domain family, member 1##AY358818|DERL1|79139|Der1-like domain family, member 1##AK303826|DERL1|79139|Der1-like domain family, member 1##BC002457|DERL1|79139|Der1-like domain family, member 1##AK056434|WDR67|93594|WD repeat domain 67##NM_001145088|WDR67|93594|WD repeat domain 67##NM_145647|WDR67|93594|WD repeat domain 67##BC101724|WDR67|93594|WD repeat domain 67##BC111954|WDR67|93594|WD repeat domain 67##BC143523|WDR67|93594|WD repeat domain 67##BC143525|WDR67|93594|WD repeat domain 67##BC105800|WDR67|93594|WD repeat domain 67##AK094612|WDR67|93594|WD repeat domain 67##NM_032899|FAM83A|84985|family with sequence similarity 83, member A##NM_207006|FAM83A|84985|family with sequence similarity 83, member A##BC052300|FAM83A|84985|family with sequence similarity 83, member A	0.428	CTCF.p2:8:0.428
chr13	33160466	33160588	reg1011398.p2	9.642	+	Z36834 TSC_hg19_v1_chr13_-_33112933 BC010643 U50532 AL049783 AK298546 AK312924 NM_014887 NM_033111	-47602	-	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	-158169	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	-270910	+	TSC_hg19_v1_chr13_+_33160588 NM_015032	36	+	TSC_hg19_v1_chr13_+_33160610 AL137201	91	+	TSC_hg19_v1_chr13_+_33160649 AB023196	112	+	Z36834|N4BP2L2|10443|NEDD4 binding protein 2-like 2##BC010643|N4BP2L2|10443|NEDD4 binding protein 2-like 2##U50532|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AL049783|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK298546|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK312924|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_014887|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_033111|N4BP2L2|10443|NEDD4 binding protein 2-like 2##BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##NM_015032|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.954555	CTCF.p2:-28:0.955
chr17	38183381	38183503	reg1013930.p1	9.642	+	NM_000759 NM_001178147 NM_172219 NM_172220 AK290247 AK298116 M17706 AK313509 X03438 X03655 BC033245 AB591019 AB102881 CR541891	-11772	+	TSC_hg19_v1_chr17_+_38137216 AB385069 CU674020 CU676540 CU678776 CU680278 BT007217 CR456772	-46238	+	TSC_hg19_v1_chr17_+_38137115 BC000074 BC020518 BC025686 BC004859	-46300	+	TSC_hg19_v1_chr17_-_38210662 EU392536 EU392541 D50920 AK022508 AK303502 AK303745 AK291040 AK293309 AK299864 AK300992	27202	-	NM_001079518 NM_014815	27446	-	AK290530 NM_001190919 AB209346	35017	+	NM_000759|CSF3|1440|colony stimulating factor 3 (granulocyte)##NM_001178147|CSF3|1440|colony stimulating factor 3 (granulocyte)##NM_172219|CSF3|1440|colony stimulating factor 3 (granulocyte)##NM_172220|CSF3|1440|colony stimulating factor 3 (granulocyte)##AK290247|CSF3|1440|colony stimulating factor 3 (granulocyte)##AK298116|CSF3|1440|colony stimulating factor 3 (granulocyte)##M17706|CSF3|1440|colony stimulating factor 3 (granulocyte)##AK313509|CSF3|1440|colony stimulating factor 3 (granulocyte)##X03438|CSF3|1440|colony stimulating factor 3 (granulocyte)##X03655|CSF3|1440|colony stimulating factor 3 (granulocyte)##BC033245|CSF3|1440|colony stimulating factor 3 (granulocyte)##AB102881|CSF3|1440|colony stimulating factor 3 (granulocyte)##CR541891|CSF3|1440|colony stimulating factor 3 (granulocyte)##BT007217|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##CR456772|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC000074|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC020518|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC025686|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC004859|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##EU392536|MED24|9862|mediator complex subunit 24##EU392541|MED24|9862|mediator complex subunit 24##D50920|MED24|9862|mediator complex subunit 24##AK022508|MED24|9862|mediator complex subunit 24##AK303502|MED24|9862|mediator complex subunit 24##AK303745|MED24|9862|mediator complex subunit 24##AK291040|MED24|9862|mediator complex subunit 24##AK293309|MED24|9862|mediator complex subunit 24##AK299864|MED24|9862|mediator complex subunit 24##AK300992|MED24|9862|mediator complex subunit 24##NM_001079518|MED24|9862|mediator complex subunit 24##NM_014815|MED24|9862|mediator complex subunit 24##AK290530|THRA|7067|thyroid hormone receptor, alpha##NM_001190919|THRA|7067|thyroid hormone receptor, alpha##AB209346|THRA|7067|thyroid hormone receptor, alpha	0.999866	CTCF.p2:8:1.000
chr10	86134810	86134947	reg1011655.p1	9.641	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-3260	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-46484	+	BX641033 NM_001012720 NM_001012722 NM_002921 U14910 BC011349 BC008094 BC042536 CU675929 DQ892074 DQ895267	-130051	+	TSC_hg19_v1_chr10_+_86184685 AK294321	49817	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	1991385	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	2146616	-	AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##BX641033|RGR|5995|retinal G protein coupled receptor##NM_001012720|RGR|5995|retinal G protein coupled receptor##NM_001012722|RGR|5995|retinal G protein coupled receptor##NM_002921|RGR|5995|retinal G protein coupled receptor##U14910|RGR|5995|retinal G protein coupled receptor##BC011349|RGR|5995|retinal G protein coupled receptor##BC008094|RGR|5995|retinal G protein coupled receptor##BC042536|RGR|5995|retinal G protein coupled receptor##DQ892074|RGR|5995|retinal G protein coupled receptor##DQ895267|RGR|5995|retinal G protein coupled receptor##AK294321|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)	0.999791	CTCF.p2:-15:1.000
chr2	220406612	220406729	reg1004552.p2	9.641	+	BC031812 NM_018674 NM_182847 AK308804 BC010439 DQ892104 CU679713 AK309373	-27662	+	TSC_hg19_v1_chr2_+_220363622 NM_013335 AK000999 NM_205847 AK290671 AK022578 AK222951 AK296193 BC007456	-42889	+	NM_001173476	-81137	+	AK302124 NM_001195731	1148	-	TSC_hg19_v1_chr2_+_220408352 BC068567	1698	+	TSC_hg19_v1_chr2_-_220408499 AB086063 BC023531 AB095813 AY358403 BC021223 NM_024536	1730	-	BC031812|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_018674|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_182847|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK308804|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##BC010439|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##DQ892104|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK309373|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_013335|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK000999|GMPPA|29926|GDP-mannose pyrophosphorylase A##NM_205847|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK290671|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK022578|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK222951|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK296193|GMPPA|29926|GDP-mannose pyrophosphorylase A##BC007456|GMPPA|29926|GDP-mannose pyrophosphorylase A##NM_001173476|SPEG|10290|SPEG complex locus##AK302124|CHPF|79586|chondroitin polymerizing factor##NM_001195731|CHPF|79586|chondroitin polymerizing factor##BC068567|TMEM198|130612|transmembrane protein 198##AB086063|CHPF|79586|chondroitin polymerizing factor##BC023531|CHPF|79586|chondroitin polymerizing factor##AB095813|CHPF|79586|chondroitin polymerizing factor##AY358403|CHPF|79586|chondroitin polymerizing factor##BC021223|CHPF|79586|chondroitin polymerizing factor##NM_024536|CHPF|79586|chondroitin polymerizing factor	0.982298	CTCF.p2:5:0.982
chr2	6666459	6666586	reg1012171.p2	9.641	+	U23752 AB028641 NM_003108 BC025789 AB464713	-833707	+	AK302299 NM_018436 BC029652	-2960725	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-3023953	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	339378	-	TSC_hg19_v1_chr2_-_7006650 AK308509	340181	-	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	351341	+	U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2	0.956558	CTCF.p2:12:0.957
chr5	111828118	111828264	reg1013547.p1	9.641	+	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	-73318	-	TSC_hg19_v1_chr5_+_111496560 AB002437	-331622	+	AK298779 NM_001142474 NM_001142475	-515617	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	215020	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	245382	+	NM_001204193 NM_001204194 NM_001204196 NM_001204199 NM_003135 TSC_hg19_v1_chr5_+_112196975	368738	+	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli##NM_001204193|SRP19|6728|signal recognition particle 19kDa##NM_001204194|SRP19|6728|signal recognition particle 19kDa##NM_001204196|SRP19|6728|signal recognition particle 19kDa##NM_001204199|SRP19|6728|signal recognition particle 19kDa##NM_003135|SRP19|6728|signal recognition particle 19kDa	0.349704	CTCF.p2:-5:0.350
chr6	100036567	100036672	reg1011888.p1	9.641	+	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	-20016	-	CU679631 CU691126 AB528579 AB125137 BC050726 TSC_hg19_v1_chr6_-_100016505 AK223247 M74091 AK291914 AK222768 BC026272 BC030159 BC056153	-20162	-	TSC_hg19_v1_chr6_+_99968921 BX647075 NM_001195131	-67720	+	AY004253 NM_021620	18030	+	AK123634 NM_001040179 NM_032503 AF347063	405491	-	NM_005068 U70212	874931	-	BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##AB125137|CCNC|892|cyclin C##BC050726|CCNC|892|cyclin C##AK223247|CCNC|892|cyclin C##M74091|CCNC|892|cyclin C##AK291914|CCNC|892|cyclin C##AK222768|CCNC|892|cyclin C##BC026272|CCNC|892|cyclin C##BC030159|CCNC|892|cyclin C##BC056153|CCNC|892|cyclin C##BX647075|LOC100130890|100130890|uncharacterized LOC100130890##NM_001195131|LOC100130890|100130890|uncharacterized LOC100130890##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)	0.0	
chrX	153402262	153402373	reg1012654.p1	9.641	+	TSC_hg19_v1_chrX_-_153363175 BX538060 AB209464 GQ203293 GQ203294 GQ203295 GQ896382 GU479943 HM020402 HM156732 HM156733 HQ141378 HQ154629 NM_001110792 NM_004992	-39137	-	TSC_hg19_v1_chrX_-_153363173 AK289444	-39159	-	BC062546 TSC_hg19_v1_chrX_-_153363132 AF158180 AY541280	-39257	-	NM_020061 CR749814	7414	+	BC140938 NM_000513 NM_001048181 BC143790 BC171754 BC171755	45777	+	BC140938 NM_000513 NM_001048181 BC143790 BC171754 BC171755	82895	+	BX538060|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##AB209464|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GQ203293|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GQ203294|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GQ203295|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GQ896382|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GU479943|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HM020402|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HM156732|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HM156733|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HQ141378|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HQ154629|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##NM_001110792|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##NM_004992|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##AK289444|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##BC062546|LOC728653|728653|uncharacterized LOC728653##AF158180|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##AY541280|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##NM_020061|OPN1LW|5956|opsin 1 (cone pigments), long-wave-sensitive##CR749814|OPN1LW|5956|opsin 1 (cone pigments), long-wave-sensitive##BC140938|OPN1MW|2652|opsin 1 (cone pigments), medium-wave-sensitive##NM_000513|OPN1MW|2652|opsin 1 (cone pigments), medium-wave-sensitive##NM_001048181|OPN1MW2|728458|opsin 1 (cone pigments), medium-wave-sensitive 2##BC143790|OPN1MW|2652|opsin 1 (cone pigments), medium-wave-sensitive##BC171754|OPN1MW|2652|opsin 1 (cone pigments), medium-wave-sensitive##BC171755|OPN1MW|2652|opsin 1 (cone pigments), medium-wave-sensitive##BC140938|OPN1MW|2652|opsin 1 (cone pigments), medium-wave-sensitive##NM_000513|OPN1MW|2652|opsin 1 (cone pigments), medium-wave-sensitive##NM_001048181|OPN1MW2|728458|opsin 1 (cone pigments), medium-wave-sensitive 2##BC143790|OPN1MW|2652|opsin 1 (cone pigments), medium-wave-sensitive##BC171754|OPN1MW|2652|opsin 1 (cone pigments), medium-wave-sensitive##BC171755|OPN1MW|2652|opsin 1 (cone pigments), medium-wave-sensitive	0.992107	CTCF.p2:16:0.992
chr3	170679475	170679610	reg1013432.p1	9.639	+	AY205258 AY205259 AY205260 AY205261 NM_020390 TSC_hg19_v1_chr3_-_170626427	-53083	-	TSC_hg19_v1_chr3_-_170626397 AK311962 BC036072	-53151	-	TSC_hg19_v1_chr3_-_170587985 BC107708 AL110170 BC062731 NM_001099645	-91547	-	AB528020 J03810 TSC_hg19_v1_chr3_-_170744510 AK313622 BC060041 AK290846 AK292741	64948	-	TSC_hg19_v1_chr3_-_170744533 AK298418	64991	-	NM_000340	65225	-	AY205258|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205259|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205260|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205261|EIF5A2|56648|eukaryotic translation initiation factor 5A2##NM_020390|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AK311962|EIF5A2|56648|eukaryotic translation initiation factor 5A2##BC036072|EIF5A2|56648|eukaryotic translation initiation factor 5A2##BC107708|RPL22L1|200916|ribosomal protein L22-like 1##AL110170|RPL22L1|200916|ribosomal protein L22-like 1##BC062731|RPL22L1|200916|ribosomal protein L22-like 1##NM_001099645|RPL22L1|200916|ribosomal protein L22-like 1##J03810|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK313622|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##BC060041|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK290846|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK292741|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2	0.940895	CTCF.p2:-22:0.941
chr4	177299018	177299156	reg1014136.p1	9.639	+	TSC_hg19_v1_chr4_-_177241652 AK096223	-57456	-	TSC_hg19_v1_chr4_+_177241122 AK026302 AL136660 AY359044 BC043490 BC053883 BC047290 CU690386 EU831652 EU831735	-57919	+	TSC_hg19_v1_chr4_+_177241098 NM_021928	-58034	+	AK313879 BC035212 U58111 X94216 U43142 BC063685 NM_005429 TSC_hg19_v1_chr4_-_177713956	414723	-	TSC_hg19_v1_chr4_+_178231006 NM_018248	931906	+	TSC_hg19_v1_chr4_+_178231027 AK001720 BC025954 AK307692 AB079071	931973	+	AK026302|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AL136660|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AY359044|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC043490|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC053883|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC047290|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831652|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831735|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##NM_021928|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AK313879|VEGFC|7424|vascular endothelial growth factor C##BC035212|VEGFC|7424|vascular endothelial growth factor C##U58111|VEGFC|7424|vascular endothelial growth factor C##X94216|VEGFC|7424|vascular endothelial growth factor C##U43142|VEGFC|7424|vascular endothelial growth factor C##BC063685|VEGFC|7424|vascular endothelial growth factor C##NM_005429|VEGFC|7424|vascular endothelial growth factor C##NM_018248|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK001720|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##BC025954|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK307692|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AB079071|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)	0.830607	CTCF.p2:-30:0.831
chr12	82720814	82720944	reg1015597.p1	9.638	+	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	-567770	-	BC104912 BC143485 NM_001220475 NM_001220476 AK126971 TSC_hg19_v1_chr12_-_82152435 AB210009 NM_001220473 NM_001220474	-568508	-	AK294505 AK297372 AK299853 NM_001220477 NM_001220478	-728825	-	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	31297	-	NM_032230 TSC_hg19_v1_chr12_+_82752307 AK310231 AK026442 BC029120 CU688600	31430	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	359821	+	AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC104912|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC143485|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220475|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220476|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK126971|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AB210009|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220473|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220474|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59##NM_032230|C12orf26|84190|chromosome 12 open reading frame 26##AK310231|C12orf26|84190|chromosome 12 open reading frame 26##AK026442|C12orf26|84190|chromosome 12 open reading frame 26##BC029120|C12orf26|84190|chromosome 12 open reading frame 26##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2	0.805907	CTCF.p2:9:0.806
chr7	123322825	123322949	reg1011920.p1	9.637	+	NM_207163 AK299434 AK299389 AK300698 AK309449 BC017911 BC062765 AK309496 AB591033	-26950	+	AF428257 BC100874 BC100875 BC100876 BC100877 NM_080928	-73794	+	CR933664 BT006695 TSC_hg19_v1_chr7_-_123197862 AK022209 BC020821 BC070236 BC070237 U64028 AK315458 U53468 BC000813 NM_005000	-124997	-	TSC_hg19_v1_chr7_-_123389069 AM295156 CU690940 AB587496 BC013776 AK289795 D88460 CR749438 BC028602 BC052955 NM_003941	66087	-	AF009010 NM_012269	162335	+	NM_001174044 NM_003117 NM_153189 AY920278 AY920279 S67798 BC026163	242439	+	NM_207163|LMOD2|442721|leiomodin 2 (cardiac)##AK299434|LMOD2|442721|leiomodin 2 (cardiac)##AK299389|LMOD2|442721|leiomodin 2 (cardiac)##AK300698|LMOD2|442721|leiomodin 2 (cardiac)##BC017911|LMOD2|442721|leiomodin 2 (cardiac)##BC062765|LMOD2|442721|leiomodin 2 (cardiac)##AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15##NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15##CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AM295156|WASL|8976|Wiskott-Aldrich syndrome-like##BC013776|WASL|8976|Wiskott-Aldrich syndrome-like##AK289795|WASL|8976|Wiskott-Aldrich syndrome-like##D88460|WASL|8976|Wiskott-Aldrich syndrome-like##CR749438|WASL|8976|Wiskott-Aldrich syndrome-like##BC028602|WASL|8976|Wiskott-Aldrich syndrome-like##BC052955|WASL|8976|Wiskott-Aldrich syndrome-like##NM_003941|WASL|8976|Wiskott-Aldrich syndrome-like##AF009010|HYAL4|23553|hyaluronoglucosaminidase 4##NM_012269|HYAL4|23553|hyaluronoglucosaminidase 4##NM_001174044|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_003117|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_153189|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920278|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920279|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##S67798|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##BC026163|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)	0.905597	CTCF.p2:-7:0.906
chr7	6475381	6475501	reg1012596.p2	9.637	+	TSC_hg19_v1_chr7_-_6474593 AK298910	-851	-	TSC_hg19_v1_chr7_+_6414179 NM_006908 NM_018890 AK054993 BC107748 AK291806 AB209410 BC050687 AK291815 AY279384 BC004247 AB451238 AB451363 AB464133 AF136373 AF498964 AJ132694 BT007121 CU690768 EU831965 EU832058 EU832640 EU832717 M29870 M31467	-61214	+	TSC_hg19_v1_chr7_-_6388581 AK311878 AF533707 BC006110 NM_001037163 BC142977	-86931	-	TSC_hg19_v1_chr7_-_6487567 BC027603 AK074584 AK093958 AK122748 AK301087 AK301104 AX748382 AK298955	12098	-	TSC_hg19_v1_chr7_-_6487586 AK075128 AK074744 AF450090 NM_001142936 NM_139179	12167	-	DQ892879 DQ896128 CU675925 CU680460 CU687206 X63745 TSC_hg19_v1_chr7_-_6523784 BC008081 BC012994 BC071982 AK127440 AK315702 NM_001100603 NM_006854	48327	-	AK298910|DAGLB|221955|diacylglycerol lipase, beta##NM_006908|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##NM_018890|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK054993|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC107748|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291806|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB209410|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC050687|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291815|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AY279384|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC004247|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451238|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451363|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF136373|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF498964|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AJ132694|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BT007121|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU831965|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832058|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832640|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832717|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M29870|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M31467|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK311878|C7orf70|84792|chromosome 7 open reading frame 70##AF533707|C7orf70|84792|chromosome 7 open reading frame 70##BC006110|C7orf70|84792|chromosome 7 open reading frame 70##NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70##BC142977|C7orf70|84792|chromosome 7 open reading frame 70##BC027603|DAGLB|221955|diacylglycerol lipase, beta##AK074584|DAGLB|221955|diacylglycerol lipase, beta##AK093958|DAGLB|221955|diacylglycerol lipase, beta##AK122748|DAGLB|221955|diacylglycerol lipase, beta##AK301087|DAGLB|221955|diacylglycerol lipase, beta##AK301104|DAGLB|221955|diacylglycerol lipase, beta##AK298955|DAGLB|221955|diacylglycerol lipase, beta##AK075128|DAGLB|221955|diacylglycerol lipase, beta##AK074744|DAGLB|221955|diacylglycerol lipase, beta##AF450090|DAGLB|221955|diacylglycerol lipase, beta##NM_001142936|DAGLB|221955|diacylglycerol lipase, beta##NM_139179|DAGLB|221955|diacylglycerol lipase, beta##DQ892879|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##DQ896128|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##X63745|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC008081|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC012994|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC071982|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##AK315702|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##NM_001100603|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##NM_006854|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2	0.986964	CTCF.p2:4:0.987
chr1	52593237	52593365	reg1014944.p1	9.635	+	AK027582 TSC_hg19_v1_chr1_+_52521975 BC022371 BC021004	-71303	+	BC070378 AK027750 TSC_hg19_v1_chr1_+_52521972	-71332	+	NM_001136497 NM_001243767 NM_152265 TSC_hg19_v1_chr1_+_52521942	-71401	+	AF130419 AF130420 NM_004799 NM_007323 NM_007324	14744	+	TSC_hg19_v1_chr1_-_52831829 BC039308 AK130874 NM_032449	238545	-	BC011539 AK303420 U43416 AK291909 U40152 TSC_hg19_v1_chr1_-_52870133 NM_001190818 NM_001190819 NM_004153	276799	-	AK027582|BTF3L4|91408|basic transcription factor 3-like 4##BC022371|BTF3L4|91408|basic transcription factor 3-like 4##BC021004|BTF3L4|91408|basic transcription factor 3-like 4##BC070378|BTF3L4|91408|basic transcription factor 3-like 4##AK027750|BTF3L4|91408|basic transcription factor 3-like 4##NM_001136497|BTF3L4|91408|basic transcription factor 3-like 4##NM_001243767|BTF3L4|91408|basic transcription factor 3-like 4##NM_152265|BTF3L4|91408|basic transcription factor 3-like 4##AF130419|ZFYVE9|9372|zinc finger, FYVE domain containing 9##AF130420|ZFYVE9|9372|zinc finger, FYVE domain containing 9##NM_004799|ZFYVE9|9372|zinc finger, FYVE domain containing 9##NM_007323|ZFYVE9|9372|zinc finger, FYVE domain containing 9##NM_007324|ZFYVE9|9372|zinc finger, FYVE domain containing 9##BC039308|CC2D1B|200014|coiled-coil and C2 domain containing 1B##AK130874|CC2D1B|200014|coiled-coil and C2 domain containing 1B##NM_032449|CC2D1B|200014|coiled-coil and C2 domain containing 1B##BC011539|ORC1|4998|origin recognition complex, subunit 1##AK303420|ORC1|4998|origin recognition complex, subunit 1##U43416|ORC1|4998|origin recognition complex, subunit 1##AK291909|ORC1|4998|origin recognition complex, subunit 1##U40152|ORC1|4998|origin recognition complex, subunit 1##NM_001190818|ORC1|4998|origin recognition complex, subunit 1##NM_001190819|ORC1|4998|origin recognition complex, subunit 1##NM_004153|ORC1|4998|origin recognition complex, subunit 1	0.988203	CTCF.p2:-9:0.988
chr6	26493659	26493758	reg1011547.p2	9.635	+	NM_001197234 NM_007049 NM_078476 TSC_hg19_v1_chr6_+_26458182 AK297098 NM_001197233 BC016661 AB209777 U90543	-35518	+	NM_001242803 NM_006994 NM_197974 AK291722 AK301553 AB209581 BC015815 AK223279 AK223301 U90548	-52969	+	AK291162 NM_001145008 NM_001145009 NM_007048 NM_194441 AK290193 AK295720 TSC_hg19_v1_chr6_+_26402502 BC118586 BC121800 AK299327 BC065567 U90552 AK298652 Y07827	-91186	+	U39576 BC096312 BC096313 BC096314 BC096315 NM_001732	7763	+	TSC_hg19_v1_chr6_+_26538630 NM_006353 AK311841 BC001282	44922	+	TSC_hg19_v1_chr6_+_26597203 NM_013375 BC066313 BC048812 AB027258 AB463399 CU688138 CU690582 EU446795	103499	+	NM_001197234|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_007049|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_078476|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AK297098|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_001197233|BTN2A1|11120|butyrophilin, subfamily 2, member A1##BC016661|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AB209777|BTN2A1|11120|butyrophilin, subfamily 2, member A1##U90543|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_001242803|BTN3A3|10384|butyrophilin, subfamily 3, member A3##NM_006994|BTN3A3|10384|butyrophilin, subfamily 3, member A3##NM_197974|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK291722|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK301553|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AB209581|BTN3A3|10384|butyrophilin, subfamily 3, member A3##BC015815|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK223279|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK223301|BTN3A3|10384|butyrophilin, subfamily 3, member A3##U90548|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK291162|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_001145008|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_001145009|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_007048|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_194441|BTN3A1|11119|butyrophilin, subfamily 3, member A1##AK290193|BTN3A1|11119|butyrophilin, subfamily 3, member A1##AK295720|BTN3A1|11119|butyrophilin, subfamily 3, member A1##BC118586|BTN3A1|11119|butyrophilin, subfamily 3, member A1##BC121800|BTN3A1|11119|butyrophilin, subfamily 3, member A1##AK299327|BTN3A1|11119|butyrophilin, subfamily 3, member A1##BC065567|BTN3A1|11119|butyrophilin, subfamily 3, member A1##U90552|BTN3A1|11119|butyrophilin, subfamily 3, member A1##AK298652|BTN3A1|11119|butyrophilin, subfamily 3, member A1##Y07827|BTN3A1|11119|butyrophilin, subfamily 3, member A1##U39576|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096312|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096313|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096314|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096315|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001732|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_006353|HMGN4|10473|high mobility group nucleosomal binding domain 4##AK311841|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC001282|HMGN4|10473|high mobility group nucleosomal binding domain 4##NM_013375|ABT1|29777|activator of basal transcription 1##BC066313|ABT1|29777|activator of basal transcription 1##BC048812|ABT1|29777|activator of basal transcription 1##AB027258|ABT1|29777|activator of basal transcription 1##EU446795|ABT1|29777|activator of basal transcription 1	0.0	
chr6	43323713	43323864	reg1012855.p4	9.635	+	AB463553 AY555741 AY555742 AY555743 AY555744 NM_206922	-47259	-	TSC_hg19_v1_chr6_+_43266009 AK290806 AK309570 AK314822 BC033805 AK290796 BC017963 DQ893614 DQ896844 AF210455 AY050498	-57736	+	TSC_hg19_v1_chr6_+_43265994 NM_006672 NM_153320 AF097518	-57791	+	TSC_hg19_v1_chr6_-_43337215 BC098434 AF090114 NM_014345 BC030687	13454	-	TSC_hg19_v1_chr6_+_43395310 AK000002 NM_001198934	71525	+	AY032599 NM_033450	75700	+	AY555741|CRIP3|401262|cysteine-rich protein 3##AY555742|CRIP3|401262|cysteine-rich protein 3##AY555743|CRIP3|401262|cysteine-rich protein 3##AY555744|CRIP3|401262|cysteine-rich protein 3##NM_206922|CRIP3|401262|cysteine-rich protein 3##AK290806|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK309570|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK314822|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC033805|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290796|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC017963|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ893614|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ896844|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF210455|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AY050498|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_006672|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_153320|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF097518|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC098434|ZNF318|24149|zinc finger protein 318##AF090114|ZNF318|24149|zinc finger protein 318##NM_014345|ZNF318|24149|zinc finger protein 318##BC030687|ZNF318|24149|zinc finger protein 318##AK000002|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_001198934|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##AY032599|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_033450|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10	0.07544	
chr7	139184835	139184967	reg1015466.p1	9.635	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-16469	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-139887	+	TSC_hg19_v1_chr7_+_139044701 AK022895 BC056886	-140175	+	NM_001080511	23772	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	293004	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	293138	+	BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AK022895|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##BC056886|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.940019	CTCF.p2:4:0.940
chr9	110246544	110246658	reg1012782.p1	9.635	+	NM_001244713 AK297986 AK316189	-199510	+	AY313777 NM_001244724 TSC_hg19_v1_chr9_+_110046392	-200235	+	TSC_hg19_v1_chr9_+_110045874 DQ890563 DQ893726 AB527553 CU676798	-200692	+	TSC_hg19_v1_chr9_-_110250732 AK095134	4119	-	HM026463 CU688792 CU689020 DQ891793 DQ894975 AB385001 TSC_hg19_v1_chr9_-_110251402 BC030811 BC029923 AK313489	4847	-	AF105036 AF022184 TSC_hg19_v1_chr9_-_110251847 U70663	5239	-	NM_001244713|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK297986|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK316189|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AY313777|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##NM_001244724|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##DQ890563|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##DQ893726|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK095134|KLF4|9314|Kruppel-like factor 4 (gut)##HM026463|KLF4|9314|Kruppel-like factor 4 (gut)##DQ891793|KLF4|9314|Kruppel-like factor 4 (gut)##DQ894975|KLF4|9314|Kruppel-like factor 4 (gut)##BC030811|KLF4|9314|Kruppel-like factor 4 (gut)##BC029923|KLF4|9314|Kruppel-like factor 4 (gut)##AK313489|KLF4|9314|Kruppel-like factor 4 (gut)##AF105036|KLF4|9314|Kruppel-like factor 4 (gut)##AF022184|KLF4|9314|Kruppel-like factor 4 (gut)##U70663|KLF4|9314|Kruppel-like factor 4 (gut)	0.143932	
chr11	72125325	72125469	reg1015235.p1	9.634	+	TSC_hg19_v1_chr11_-_71955221 AK290645 NM_005169	-170162	-	BC041564 TSC_hg19_v1_chr11_-_71955201	-170195	-	Y14385 BC140853 NM_001567	-189545	+	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	20058	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	20179	-	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	20253	-	AK290645|PHOX2A|401|paired-like homeobox 2a##NM_005169|PHOX2A|401|paired-like homeobox 2a##BC041564|PHOX2A|401|paired-like homeobox 2a##Y14385|INPPL1|3636|inositol polyphosphate phosphatase-like 1##BC140853|INPPL1|3636|inositol polyphosphate phosphatase-like 1##NM_001567|INPPL1|3636|inositol polyphosphate phosphatase-like 1##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)	0.983731	CTCF.p2:-2:0.984
chr19	11923078	11923183	reg1013076.p1	9.634	+	AK297479 NM_152356 AK096593	-13751	+	NM_152355 TSC_hg19_v1_chr19_+_11877884 AK095956	-45270	+	X51760 BC052597 AK308189 NM_001080493 AK300579 AK303213	-73372	-	TSC_hg19_v1_chr19_+_11925098 AK095252 NM_152357 BC035760	1976	+	AL833935 NM_152262	53713	+	TSC_hg19_v1_chr19_+_11998643 BC051309 NM_021915 EU446913	75543	+	AK297479|ZNF491|126069|zinc finger protein 491##NM_152356|ZNF491|126069|zinc finger protein 491##AK096593|ZNF491|126069|zinc finger protein 491##NM_152355|ZNF441|126068|zinc finger protein 441##AK095956|ZNF441|126068|zinc finger protein 441##X51760|ZNF823|55552|zinc finger protein 823##BC052597|ZNF823|55552|zinc finger protein 823##AK308189|ZNF823|55552|zinc finger protein 823##NM_001080493|ZNF823|55552|zinc finger protein 823##AK300579|ZNF823|55552|zinc finger protein 823##AK303213|ZNF823|55552|zinc finger protein 823##AK095252|ZNF440|126070|zinc finger protein 440##NM_152357|ZNF440|126070|zinc finger protein 440##BC035760|ZNF440|126070|zinc finger protein 440##AL833935|ZNF439|90594|zinc finger protein 439##NM_152262|ZNF439|90594|zinc finger protein 439##BC051309|ZNF69|7620|zinc finger protein 69##NM_021915|ZNF69|7620|zinc finger protein 69##EU446913|ZNF69|7620|zinc finger protein 69	0.73028	CTCF.p2:-1:0.730
chr2	240065693	240065833	reg1015278.p1	9.634	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	-309000	+	TSC_hg19_v1_chr2_+_239335693 AF156777	-730074	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	-730157	+	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	256885	-	TSC_hg19_v1_chr2_-_240322695 BC039904	256935	-	TSC_hg19_v1_chr2_-_240323341 AK308791	257585	-	BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)##AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AK308791|HDAC4|9759|histone deacetylase 4	0.886485	CTCF.p2:-1:0.886
chr10	75863413	75863548	reg1015893.p1	9.633	+	TSC_hg19_v1_chr10_+_75757873 AK304823 NM_003373 NM_014000 AK300280 AK296509 BC099919 BC039174 M33308 AB385172 DQ894680	-105574	+	BC049374 NM_001001791	-180946	-	AB208961 TSC_hg19_v1_chr10_+_75673428	-190093	+	TSC_hg19_v1_chr10_-_75910513 BC067127	47032	-	TSC_hg19_v1_chr10_-_75910561 AK315597 AK026983 AK299352 BC026232 NM_012095 NM_207012	47208	-	TSC_hg19_v1_chr10_+_75910978 NM_001202450 NM_006721 AK301590 U90338 U33936	47489	+	AK304823|VCL|7414|vinculin##NM_003373|VCL|7414|vinculin##NM_014000|VCL|7414|vinculin##AK300280|VCL|7414|vinculin##AK296509|VCL|7414|vinculin##BC039174|VCL|7414|vinculin##M33308|VCL|7414|vinculin##DQ894680|VCL|7414|vinculin##BC049374|C10orf55|414236|chromosome 10 open reading frame 55##NM_001001791|C10orf55|414236|chromosome 10 open reading frame 55##AB208961|PLAU|5328|plasminogen activator, urokinase##BC067127|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK315597|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK026983|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK299352|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##BC026232|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_012095|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_207012|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_001202450|ADK|132|adenosine kinase##NM_006721|ADK|132|adenosine kinase##AK301590|ADK|132|adenosine kinase##U90338|ADK|132|adenosine kinase##U33936|ADK|132|adenosine kinase	0.86649	CTCF.p2:9:0.866
chr16	80858785	80858936	reg1013264.p1	9.633	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	-20813	-	AF125108 NM_130897 BC054892 BC035232	-283972	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-1224245	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	181224	+	TSC_hg19_v1_chr16_+_81040132 BC007334	181283	+	TSC_hg19_v1_chr16_-_81040491 AF201935 BC032631 NM_020188	181610	-	AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N##BC007334|CENPN|55839|centromere protein N##AF201935|C16orf61|56942|chromosome 16 open reading frame 61##BC032631|C16orf61|56942|chromosome 16 open reading frame 61##NM_020188|C16orf61|56942|chromosome 16 open reading frame 61	0.87753	CTCF.p2:8:0.878
chr2	112212087	112212219	reg1013993.p1	9.632	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-333666	+	AK300513 NM_001142807 BC022268	-721974	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-776331	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	429473	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	429608	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	444032	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.297419	CTCF.p2:9:0.297
chr5	157096062	157096175	reg1011485.p2	9.632	+	AB022083 AB022441 AK308329 AK225861 BC033492 NM_007017 NM_178424	-16719	-	AB527685 TSC_hg19_v1_chr5_-_157079170	-16990	-	AF311317 AF326918 TSC_hg19_v1_chr5_-_157002784 Y13786 AK091464 AK308182 AX747000 NM_033274	-93313	-	BC035142 AK055284 TSC_hg19_v1_chr5_-_157098473 AK302162	2347	-	NM_001145132	2442	+	AY463216 NM_017872 TSC_hg19_v1_chr5_+_157158427 AK000553 AK223119 AK304590 BC023521 AL136669 AK021663 AB528251 AM392629 CR533503 BC001523 BC001852 CU674750	62310	+	AB022083|SOX30|11063|SRY (sex determining region Y)-box 30##AB022441|SOX30|11063|SRY (sex determining region Y)-box 30##AK308329|SOX30|11063|SRY (sex determining region Y)-box 30##BC033492|SOX30|11063|SRY (sex determining region Y)-box 30##NM_007017|SOX30|11063|SRY (sex determining region Y)-box 30##NM_178424|SOX30|11063|SRY (sex determining region Y)-box 30##AF311317|ADAM19|8728|ADAM metallopeptidase domain 19##AF326918|ADAM19|8728|ADAM metallopeptidase domain 19##Y13786|ADAM19|8728|ADAM metallopeptidase domain 19##AK091464|ADAM19|8728|ADAM metallopeptidase domain 19##AK308182|ADAM19|8728|ADAM metallopeptidase domain 19##NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19##AK302162|SOX30|11063|SRY (sex determining region Y)-box 30##NM_001145132|C5orf52|100190949|chromosome 5 open reading frame 52##AY463216|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##NM_017872|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK000553|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK223119|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK304590|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC023521|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AL136669|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK021663|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##CR533503|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001523|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001852|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)	0.151397	
chr16	46952867	46953001	reg1012495.p1	9.629	+	NM_001142466 AK094971	-33832	+	TSC_hg19_v1_chr16_+_46918291 AY029173 NM_133443 BC062555	-34653	+	TSC_hg19_v1_chr16_-_46865090 CU691166 BC056676 BX647945 NM_001001436	-87846	-	TSC_hg19_v1_chr16_-_47005340 Y13350	52414	-	CU677459 AF011793 AJ001309 TSC_hg19_v1_chr16_-_47007561	54588	-	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	54661	-	NM_001142466|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##AK094971|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##AY029173|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##NM_133443|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##BC062555|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##BC056676|C16orf87|388272|chromosome 16 open reading frame 87##BX647945|C16orf87|388272|chromosome 16 open reading frame 87##NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87##Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AJ001309|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2	0.166513	
chr2	153597371	153597507	reg1014689.p1	9.629	+	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-22295	+	BC028741 TSC_hg19_v1_chr2_+_153575133	-22308	+	TSC_hg19_v1_chr2_+_153575123 AK315657	-22324	+	AK311958 BC002908 AK074808 AB043585 NM_019845	737812	-	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	1131005	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	1957750	+	BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##BC028741|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK315657|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	0.928662	CTCF.p2:-36:0.929
chr2	19562876	19562996	reg1011912.p2	9.629	+	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	-4557	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	-792126	-	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	-821020	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	505699	+	TSC_hg19_v1_chr2_-_20101456 BC050088	538492	-	CU691276 BC070381 TSC_hg19_v1_chr2_-_20101717 BC057850 NM_001008237	538745	-	BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946##BC070381|TTC32|130502|tetratricopeptide repeat domain 32##BC057850|TTC32|130502|tetratricopeptide repeat domain 32##NM_001008237|TTC32|130502|tetratricopeptide repeat domain 32	0.98234	CTCF.p2:6:0.982
chr8	132258190	132258337	reg1014454.p1	9.629	+	NM_001115	-205429	-	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	-802232	-	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-1229380	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	658094	+	TSC_hg19_v1_chr8_+_132916379 BC108667	658114	+	AK307433 TSC_hg19_v1_chr8_+_132916394	658127	+	NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC108667|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##AK307433|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.813656	CTCF.p2:-10:0.814
chr11	85929628	85929773	reg1014271.p1	9.628	+	AK300275 NM_001206947	-148790	-	TSC_hg19_v1_chr11_-_85780127 AB210017 NM_001008660 NM_001206946 NM_007166 AK291414	-149576	-	TSC_hg19_v1_chr11_-_85780088 BC064357	-149605	-	TSC_hg19_v1_chr11_+_85955830 NM_003797 NM_152991 AK292120 AF080227	26159	+	AF070418 TSC_hg19_v1_chr11_+_85956058	26349	+	AF099032 U90651 TSC_hg19_v1_chr11_+_85956254	26517	+	AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AB210017|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001008660|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206946|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_007166|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AK291414|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC064357|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_003797|EED|8726|embryonic ectoderm development##NM_152991|EED|8726|embryonic ectoderm development##AK292120|EED|8726|embryonic ectoderm development##AF080227|EED|8726|embryonic ectoderm development##AF070418|EED|8726|embryonic ectoderm development##AF099032|EED|8726|embryonic ectoderm development##U90651|EED|8726|embryonic ectoderm development	0.932149	CTCF.p2:-2:0.932
chr3	9394984	9395098	reg1012250.p1	9.627	+	TSC_hg19_v1_chr3_-_9291320 NM_001033117 NM_014850 BC140004 AK054831	-103723	-	AB007871 AB384477 AK094355 AF427144 TSC_hg19_v1_chr3_-_9290871 AF464189	-104297	-	AB528316 DQ891197 DQ894380 TSC_hg19_v1_chr3_-_9005128 AY004333 BC001302 AK222771 AF169796 AK023075 NM_020165	-389911	-	TSC_hg19_v1_chr3_+_9404750 NM_001114092 NM_015453 AK023263 BC001622 AK001680 BC010421	9734	+	TSC_hg19_v1_chr3_-_9438337 BC036698 BC052961	43297	-	AK093640 TSC_hg19_v1_chr3_-_9439124 AL110136	44106	-	NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AB007871|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK094355|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF427144|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF464189|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##DQ891197|RAD18|56852|RAD18 homolog (S. cerevisiae)##DQ894380|RAD18|56852|RAD18 homolog (S. cerevisiae)##AY004333|RAD18|56852|RAD18 homolog (S. cerevisiae)##BC001302|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK222771|RAD18|56852|RAD18 homolog (S. cerevisiae)##AF169796|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK023075|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_020165|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_001114092|THUMPD3|25917|THUMP domain containing 3##NM_015453|THUMPD3|25917|THUMP domain containing 3##AK023263|THUMPD3|25917|THUMP domain containing 3##BC001622|THUMPD3|25917|THUMP domain containing 3##AK001680|THUMPD3|25917|THUMP domain containing 3##BC010421|THUMPD3|25917|THUMP domain containing 3##BC036698|LOC440944|440944|uncharacterized LOC440944##BC052961|LOC440944|440944|uncharacterized LOC440944##AK093640|LOC440944|440944|uncharacterized LOC440944##AL110136|LOC440944|440944|uncharacterized LOC440944	0.977958	CTCF.p2:0:0.978
chr4	167515593	167515715	reg1012140.p1	9.627	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-721200	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-1215497	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-1266799	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	639957	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	640050	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	640086	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.344545	CTCF.p2:29:0.345
chr13	30117470	30117602	reg1014329.p1	9.626	+	AK301633 TSC_hg19_v1_chr13_+_30070532	-47029	+	BC032481 NM_015233 AK293970 BC119654 BC119655 BC129985	-114726	+	BC150245 AB018317 NM_001033602 AB384524	-518761	+	X59155 X57303 TSC_hg19_v1_chr13_-_30169595 AK312818 BC063303	52085	-	TSC_hg19_v1_chr13_-_30169826 NM_003045	52284	-	AK307361 AM393248 AM393364 CR533458 AF044221 AL080177 AK311846 TSC_hg19_v1_chr13_-_30423999	306263	-	AK301633|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC150245|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AB018317|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_001033602|MTUS2|23281|microtubule associated tumor suppressor candidate 2##X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##NM_003045|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK307361|UBL3|5412|ubiquitin-like 3##AM393248|UBL3|5412|ubiquitin-like 3##AM393364|UBL3|5412|ubiquitin-like 3##CR533458|UBL3|5412|ubiquitin-like 3##AF044221|UBL3|5412|ubiquitin-like 3##AL080177|UBL3|5412|ubiquitin-like 3##AK311846|UBL3|5412|ubiquitin-like 3	0.014093	
chr17	27206171	27206277	reg1012733.p1	9.626	+	TSC_hg19_v1_chr17_+_27182033 AB049388 AK023342 AY007435 BX537542 BC019094 NM_005702 CU676380 DQ892626 DQ895866 AF082657 AF082658	-24201	+	BC021228 TSC_hg19_v1_chr17_-_27169811 BX647766 AK299477 AK001562 AK057665 NM_001077498 NM_018182	-36434	-	TSC_hg19_v1_chr17_-_27139467 AK095569	-66777	-	M60922 CU678570 AB528533 BC003683 TSC_hg19_v1_chr17_-_27224641	18384	-	TSC_hg19_v1_chr17_-_27224717 NM_004475	18488	-	AX795344 TSC_hg19_v1_chr17_-_27229986 AX795345 AX795340 AX795338 AX795342 BC015582 AX795337 AX795341 AX795339 AX795335 AX795336 AK296017 AX795346 AX795343 AY358566 NM_144683	23781	-	AB049388|ERAL1|26284|Era G-protein-like 1 (E. coli)##AK023342|ERAL1|26284|Era G-protein-like 1 (E. coli)##AY007435|ERAL1|26284|Era G-protein-like 1 (E. coli)##BX537542|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC019094|ERAL1|26284|Era G-protein-like 1 (E. coli)##NM_005702|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ892626|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ895866|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082657|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082658|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC021228|C17orf63|55731|chromosome 17 open reading frame 63##BX647766|C17orf63|55731|chromosome 17 open reading frame 63##AK299477|C17orf63|55731|chromosome 17 open reading frame 63##AK001562|C17orf63|55731|chromosome 17 open reading frame 63##AK057665|C17orf63|55731|chromosome 17 open reading frame 63##NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63##NM_018182|C17orf63|55731|chromosome 17 open reading frame 63##AK095569|C17orf63|55731|chromosome 17 open reading frame 63##M60922|FLOT2|2319|flotillin 2##BC003683|FLOT2|2319|flotillin 2##NM_004475|FLOT2|2319|flotillin 2##BC015582|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AK296017|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AY358566|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##NM_144683|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13	0.030677	
chr20	247710	247847	reg1014611.p1	9.626	+	AY358708 EF426755 NM_207469 BC137292 BC137293 AF525932 AY621329	-9381	+	BC070359 NM_080831 AY122480 AY358186 CU687092 HQ447599 AF525931 AF529413	-39865	+	AF525930 NM_001037732 BC140936	-77486	-	TSC_hg19_v1_chr20_-_271080 AK091924 AX747257 AK304526 BX640715 BC051762	23296	-	AK302223 TSC_hg19_v1_chr20_-_271367 BC134417 BC137450 BC144648 BC144649 AK097394 NM_080571 NM_153269	23586	-	TSC_hg19_v1_chr20_+_278213 BC069238 NM_033089 AK025768 BC107584 BC036469	30431	+	AY358708|DEFB132|400830|defensin, beta 132##EF426755|DEFB132|400830|defensin, beta 132##NM_207469|DEFB132|400830|defensin, beta 132##BC137292|DEFB132|400830|defensin, beta 132##BC137293|DEFB132|400830|defensin, beta 132##AF525932|DEFB132|400830|defensin, beta 132##AY621329|DEFB132|400830|defensin, beta 132##BC070359|DEFB129|140881|defensin, beta 129##NM_080831|DEFB129|140881|defensin, beta 129##AY122480|DEFB129|140881|defensin, beta 129##AY358186|DEFB129|140881|defensin, beta 129##HQ447599|DEFB129|140881|defensin, beta 129##AF525931|DEFB129|140881|defensin, beta 129##AF529413|DEFB129|140881|defensin, beta 129##AF525930|DEFB128|245939|defensin, beta 128##NM_001037732|DEFB128|245939|defensin, beta 128##BC140936|DEFB128|245939|defensin, beta 128##AK091924|C20orf96|140680|chromosome 20 open reading frame 96##AK304526|C20orf96|140680|chromosome 20 open reading frame 96##BX640715|C20orf96|140680|chromosome 20 open reading frame 96##BC051762|C20orf96|140680|chromosome 20 open reading frame 96##AK302223|C20orf96|140680|chromosome 20 open reading frame 96##BC134417|C20orf96|140680|chromosome 20 open reading frame 96##BC137450|C20orf96|140680|chromosome 20 open reading frame 96##BC144648|C20orf96|140680|chromosome 20 open reading frame 96##BC144649|C20orf96|140680|chromosome 20 open reading frame 96##AK097394|C20orf96|140680|chromosome 20 open reading frame 96##NM_080571|C20orf96|140680|chromosome 20 open reading frame 96##NM_153269|C20orf96|140680|chromosome 20 open reading frame 96##BC069238|ZCCHC3|85364|zinc finger, CCHC domain containing 3##NM_033089|ZCCHC3|85364|zinc finger, CCHC domain containing 3##AK025768|ZCCHC3|85364|zinc finger, CCHC domain containing 3##BC107584|ZCCHC3|85364|zinc finger, CCHC domain containing 3##BC036469|ZCCHC3|85364|zinc finger, CCHC domain containing 3	0.996661	CTCF.p2:14:0.997
chr5	149213947	149214070	reg1013156.p1	9.626	+	AK123614 NM_001172699	-62506	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	-104132	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	-104181	+	BC144044 BC035909 AB593141 M26061 NM_000440	110310	-	TSC_hg19_v1_chr5_+_149340320 NM_000112	126300	+	TSC_hg19_v1_chr5_+_149340352 AK312596	126343	+	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144044|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##BC035909|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##AB593141|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##M26061|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000440|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2	0.951204	CTCF.p2:-13:0.951
chr7	97795587	97795711	reg1014000.p1	9.626	+	TSC_hg19_v1_chr7_+_97736173 AB029002 BC146773 NM_014916 BC131504 AB384558 AB590084 AY130988	-59313	+	TSC_hg19_v1_chr7_-_97619350 AB528806 NM_006188	-176267	-	TSC_hg19_v1_chr7_-_97601657 BC030024	-193989	-	BC113394 BC113396 NM_177455 AB464465	45942	+	TSC_hg19_v1_chr7_-_97881512 AK292996 BC053591 NM_015395 AK057048	85850	-	NM_001159491 NM_015379 TSC_hg19_v1_chr7_+_97910997 AB055977 BC018737 AF041430 BC062370 BC071992	115350	+	AB029002|LMTK2|22853|lemur tyrosine kinase 2##BC146773|LMTK2|22853|lemur tyrosine kinase 2##NM_014916|LMTK2|22853|lemur tyrosine kinase 2##BC131504|LMTK2|22853|lemur tyrosine kinase 2##AY130988|LMTK2|22853|lemur tyrosine kinase 2##NM_006188|OCM2|4951|oncomodulin 2##BC113394|BHLHA15|168620|basic helix-loop-helix family, member a15##BC113396|BHLHA15|168620|basic helix-loop-helix family, member a15##NM_177455|BHLHA15|168620|basic helix-loop-helix family, member a15##AK292996|TECPR1|25851|tectonin beta-propeller repeat containing 1##BC053591|TECPR1|25851|tectonin beta-propeller repeat containing 1##NM_015395|TECPR1|25851|tectonin beta-propeller repeat containing 1##AK057048|TECPR1|25851|tectonin beta-propeller repeat containing 1##NM_001159491|BRI3|25798|brain protein I3##NM_015379|BRI3|25798|brain protein I3##AB055977|BRI3|25798|brain protein I3##BC018737|BRI3|25798|brain protein I3##AF041430|BRI3|25798|brain protein I3##BC062370|BRI3|25798|brain protein I3	0.097423	
chr1	160807406	160807523	reg1013168.p2	9.625	+	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	-41466	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-98400	+	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	-125878	-	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	25114	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	47494	-	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	117095	-	NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2	0.130942	
chr14	63743575	63743723	reg1013114.p1	9.625	+	NM_020663 AF087862 AK027351 AK027278 BC062575 AB209218 AF309563	-72468	+	AK074484 NM_172376	-175066	-	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	-231720	-	NM_145171	41943	-	AB451233 AB451358 EU447000 TSC_hg19_v1_chr14_-_64006406	262757	-	BC093766 BC101479 BC143231 BC143234 TSC_hg19_v1_chr14_-_64009581	265924	-	NM_020663|RHOJ|57381|ras homolog gene family, member J##AF087862|RHOJ|57381|ras homolog gene family, member J##AK027351|RHOJ|57381|ras homolog gene family, member J##AK027278|RHOJ|57381|ras homolog gene family, member J##BC062575|RHOJ|57381|ras homolog gene family, member J##AB209218|RHOJ|57381|ras homolog gene family, member J##AF309563|RHOJ|57381|ras homolog gene family, member J##AK074484|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172376|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_145171|GPHB5|122876|glycoprotein hormone beta 5##AB451233|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AB451358|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##EU447000|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC093766|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC101479|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC143231|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC143234|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform	0.98608	CTCF.p2:17:0.986
chr19	30262765	30262886	reg1014036.p1	9.625	+	TSC_hg19_v1_chr19_-_30206402 NM_031448	-56403	-	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	-56733	-	TSC_hg19_v1_chr19_+_30156375 AK225814	-106404	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	40076	+	BC026184 NM_001252641	151725	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	170457	+	NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone	0.592439	CTCF.p2:-4:0.592
chr10	21559007	21559122	reg1012021.p1	9.624	+	TSC_hg19_v1_chr10_-_21463021 BC126132 BC126134 BC144201 AJ580772 NM_001173484 NM_213569	-95997	-	AB209311 TSC_hg19_v1_chr10_-_21462987	-96077	-	BC140744 BC144447 NM_001010896 NM_001177483	-123577	-	BC130594 BC132974 TSC_hg19_v1_chr10_-_21785960	226868	-	TSC_hg19_v1_chr10_-_21786190 BC040880	227127	-	TSC_hg19_v1_chr10_-_21786207 NM_001010911	227161	-	BC126132|NEBL|10529|nebulette##BC126134|NEBL|10529|nebulette##BC144201|NEBL|10529|nebulette##AJ580772|NEBL|10529|nebulette##NM_001173484|NEBL|10529|nebulette##NM_213569|NEBL|10529|nebulette##AB209311|NEBL|10529|nebulette##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113##BC130594|C10orf114|399726|chromosome 10 open reading frame 114##BC132974|C10orf114|399726|chromosome 10 open reading frame 114##BC040880|C10orf114|399726|chromosome 10 open reading frame 114##NM_001010911|C10orf114|399726|chromosome 10 open reading frame 114	0.517253	CTCF.p2:9:0.494
chr22	17378316	17378425	reg1012181.p1	9.624	+	BC137521 BC137522 BC144679 AY989815 AK098608 AY534240 BC045548 NM_175878	-75801	-	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	-304801	-	NM_001005239	-928567	-	AB076978 NM_001037814	110741	-	TSC_hg19_v1_chr22_+_17565850 NM_014339	187481	+	TSC_hg19_v1_chr22_+_17565906 BC011624	187532	+	BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_001005239|OR11H1|81061|olfactory receptor, family 11, subfamily H, member 1##AB076978|GAB4|128954|GRB2-associated binding protein family, member 4##NM_001037814|GAB4|128954|GRB2-associated binding protein family, member 4##NM_014339|IL17RA|23765|interleukin 17 receptor A##BC011624|IL17RA|23765|interleukin 17 receptor A	0.802197	CTCF.p2:-2:0.802
chr22	22292521	22292653	reg1011407.p1	9.624	+	TSC_hg19_v1_chr22_-_22221955 BC017832 NM_002745 NM_138957	-70617	-	AK295188 TSC_hg19_v1_chr22_-_22221938	-70650	-	TSC_hg19_v1_chr22_-_22221936 DQ399292 AB384931 EU176323 EU831429 EU831522 AK307615 Z11694 AK090869 BC099905	-70758	-	TSC_hg19_v1_chr22_-_22307191 BC071989 BC013798 D13640 BC105599	14612	-	TSC_hg19_v1_chr22_-_22307213 AK291628 NM_014634	14644	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	44560	-	BC017832|MAPK1|5594|mitogen-activated protein kinase 1##NM_002745|MAPK1|5594|mitogen-activated protein kinase 1##NM_138957|MAPK1|5594|mitogen-activated protein kinase 1##AK295188|MAPK1|5594|mitogen-activated protein kinase 1##DQ399292|MAPK1|5594|mitogen-activated protein kinase 1##EU176323|MAPK1|5594|mitogen-activated protein kinase 1##EU831429|MAPK1|5594|mitogen-activated protein kinase 1##EU831522|MAPK1|5594|mitogen-activated protein kinase 1##AK307615|MAPK1|5594|mitogen-activated protein kinase 1##Z11694|MAPK1|5594|mitogen-activated protein kinase 1##AK090869|MAPK1|5594|mitogen-activated protein kinase 1##BC099905|MAPK1|5594|mitogen-activated protein kinase 1##BC071989|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##D13640|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##BC105599|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##AK291628|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##NM_014634|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta	0.989919	CTCF.p2:-6:0.990
chr15	84049504	84049639	reg1014493.p1	9.623	+	L03427 NM_001717 TSC_hg19_v1_chr15_-_83953480	-96093	-	TSC_hg19_v1_chr15_-_83952207 AK302992	-97369	-	BC040554 TSC_hg19_v1_chr15_-_83876823	-172775	-	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	66489	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	66657	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	273256	+	L03427|BNC1|646|basonuclin 1##NM_001717|BNC1|646|basonuclin 1##AK302992|BNC1|646|basonuclin 1##BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3	0.376564	CTCF.p2:-2:0.377
chr3	119901882	119902022	reg1015743.p1	9.623	+	TSC_hg19_v1_chr3_+_119813618 BC035247	-88282	+	TSC_hg19_v1_chr3_-_119813270 BC012760 NM_001146156 NM_002093	-88801	-	BC000251 AK290897 TSC_hg19_v1_chr3_-_119812684	-89331	-	NM_001168271 NM_153002	61189	-	TSC_hg19_v1_chr3_-_120068162 AB528173 AM393236 BC013757 NM_001099678	166189	-	TSC_hg19_v1_chr3_-_120169846 AB527652 D89937 BC000055 U06863 AK300356 AK289388 AK291138 AK311050 AK300436 BX647421 AK312261 NM_007085	267885	-	BC012760|GSK3B|2932|glycogen synthase kinase 3 beta##NM_001146156|GSK3B|2932|glycogen synthase kinase 3 beta##NM_002093|GSK3B|2932|glycogen synthase kinase 3 beta##BC000251|GSK3B|2932|glycogen synthase kinase 3 beta##AK290897|GSK3B|2932|glycogen synthase kinase 3 beta##NM_001168271|GPR156|165829|G protein-coupled receptor 156##NM_153002|GPR156|165829|G protein-coupled receptor 156##AM393236|LRRC58|116064|leucine rich repeat containing 58##BC013757|LRRC58|116064|leucine rich repeat containing 58##NM_001099678|LRRC58|116064|leucine rich repeat containing 58##BC000055|FSTL1|11167|follistatin-like 1##U06863|FSTL1|11167|follistatin-like 1##AK300356|FSTL1|11167|follistatin-like 1##AK289388|FSTL1|11167|follistatin-like 1##AK291138|FSTL1|11167|follistatin-like 1##AK311050|FSTL1|11167|follistatin-like 1##AK300436|FSTL1|11167|follistatin-like 1##BX647421|FSTL1|11167|follistatin-like 1##AK312261|FSTL1|11167|follistatin-like 1##NM_007085|FSTL1|11167|follistatin-like 1	0.485322	CTCF.p2:22:0.485
chr16	85693476	85693596	reg1012593.p1	9.622	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	-46583	+	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	-48515	+	BC093665 BC111944 AK126284 NM_198491	-547482	-	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	29006	-	BC003186 NM_016095 TSC_hg19_v1_chr16_-_85722590	29063	-	TSC_hg19_v1_chr16_-_85784703 NM_206967	91152	-	NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC003186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_016095|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_206967|C16orf74|404550|chromosome 16 open reading frame 74	0.970533	CTCF.p2:3:0.971
chr17	40679348	40679482	reg1010664.p1	9.622	+	TSC_hg19_v1_chr17_+_40610941 AK295682	-68464	+	TSC_hg19_v1_chr17_+_40610920 CR627443 BC032398	-68489	+	AK294512 TSC_hg19_v1_chr17_+_40610908	-68507	+	NM_000263	8535	+	U40846 TSC_hg19_v1_chr17_+_40688258	8809	+	TSC_hg19_v1_chr17_+_40688278 BC053991 L78464 U43573	8862	+	AK295682|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##CR627443|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##BC032398|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK294512|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_000263|NAGLU|4669|N-acetylglucosaminidase, alpha##U40846|NAGLU|4669|N-acetylglucosaminidase, alpha##BC053991|NAGLU|4669|N-acetylglucosaminidase, alpha##L78464|NAGLU|4669|N-acetylglucosaminidase, alpha##U43573|NAGLU|4669|N-acetylglucosaminidase, alpha	0.939381	CTCF.p2:25:0.939
chr5	54163301	54163438	reg1015432.p1	9.622	+	TSC_hg19_v1_chr5_+_53813761 AF395536	-349598	+	TSC_hg19_v1_chr5_+_53813656 BC117218 BC117220	-349696	+	TSC_hg19_v1_chr5_+_53813588 AK304195 NM_001145427 BC060791 BC067860 NM_001102575 NM_052870	-349824	+	AB590689 CU680150 AJ973643 X89426 BC011989 NM_001135604 NM_007036 TSC_hg19_v1_chr5_-_54281422 AK300634 AK311817	118014	-	AK312074 BC035802 NM_002104 U26174 DQ894093 EU176203 U35237	156747	+	NM_006144 BC015739 DQ893071 DQ896326 AB528402 CR456968 M18737	235122	+	AF395536|SNX18|112574|sorting nexin 18##BC117218|SNX18|112574|sorting nexin 18##BC117220|SNX18|112574|sorting nexin 18##AK304195|SNX18|112574|sorting nexin 18##NM_001145427|SNX18|112574|sorting nexin 18##BC060791|SNX18|112574|sorting nexin 18##BC067860|SNX18|112574|sorting nexin 18##NM_001102575|SNX18|112574|sorting nexin 18##NM_052870|SNX18|112574|sorting nexin 18##AJ973643|ESM1|11082|endothelial cell-specific molecule 1##X89426|ESM1|11082|endothelial cell-specific molecule 1##BC011989|ESM1|11082|endothelial cell-specific molecule 1##NM_001135604|ESM1|11082|endothelial cell-specific molecule 1##NM_007036|ESM1|11082|endothelial cell-specific molecule 1##AK300634|ESM1|11082|endothelial cell-specific molecule 1##AK311817|ESM1|11082|endothelial cell-specific molecule 1##AK312074|GZMK|3003|granzyme K (granzyme 3; tryptase II)##BC035802|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_002104|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U26174|GZMK|3003|granzyme K (granzyme 3; tryptase II)##DQ894093|GZMK|3003|granzyme K (granzyme 3; tryptase II)##EU176203|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U35237|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	0.544224	CTCF.p2:7:0.544
chr21	31713430	31713568	reg1015191.p1	9.621	+	AB096937 NM_001077711	-3488	-	BC057825 NM_203405	-20893	-	AB180043 NM_001128598	-51668	-	BC128435 NM_181624	7424	-	AB096938 BC093934 BC093936 NM_181621	31052	-	BC113536 BC113538 AB096939 NM_181599 AJ457066	54909	+	AB096937|KRTAP27-1|643812|keratin associated protein 27-1##NM_001077711|KRTAP27-1|643812|keratin associated protein 27-1##BC057825|KRTAP26-1|388818|keratin associated protein 26-1##NM_203405|KRTAP26-1|388818|keratin associated protein 26-1##AB180043|KRTAP25-1|100131902|keratin associated protein 25-1##NM_001128598|KRTAP25-1|100131902|keratin associated protein 25-1##BC128435|KRTAP23-1|337963|keratin associated protein 23-1##NM_181624|KRTAP23-1|337963|keratin associated protein 23-1##AB096938|KRTAP13-2|337959|keratin associated protein 13-2##BC093934|KRTAP13-2|337959|keratin associated protein 13-2##BC093936|KRTAP13-2|337959|keratin associated protein 13-2##NM_181621|KRTAP13-2|337959|keratin associated protein 13-2##BC113536|KRTAP13-1|140258|keratin associated protein 13-1##BC113538|KRTAP13-1|140258|keratin associated protein 13-1##AB096939|KRTAP13-1|140258|keratin associated protein 13-1##NM_181599|KRTAP13-1|140258|keratin associated protein 13-1##AJ457066|KRTAP13-1|140258|keratin associated protein 13-1	0.986568	CTCF.p2:-9:0.987
chr5	56594164	56594284	reg1013082.p1	9.621	+	NM_001127236 AL136844 AB463051 AM392551 AM393442	-84296	+	BC113004 NM_001127235	-122951	+	TSC_hg19_v1_chr5_+_56469911 AL161991 AY226828	-124327	+	BC137470 BC137473 BX648504 NM_001017992	184370	-	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	1161712	-	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	1193070	+	NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1##AL161991|GPBP1|65056|GC-rich promoter binding protein 1##AY226828|GPBP1|65056|GC-rich promoter binding protein 1##BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane	0.943727	CTCF.p2:-9:0.944
chr7	121859466	121859588	reg1014084.p1	9.621	+	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	-75238	-	TSC_hg19_v1_chr7_+_121513214 U88967	-346306	+	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	-346366	+	AY726588 BC127714 BC127715 NM_001024613 NM_001160264 BC136684 BC144367 AK300742	85062	-	BC022038 AF447589 NM_139175 AK098524	479670	-	AK058116 AK098654 BC029264 NM_198085	483465	-	AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase##U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##AY726588|FEZF1|389549|FEZ family zinc finger 1##BC127714|FEZF1|389549|FEZ family zinc finger 1##BC127715|FEZF1|389549|FEZ family zinc finger 1##NM_001024613|FEZF1|389549|FEZ family zinc finger 1##NM_001160264|FEZF1|389549|FEZ family zinc finger 1##BC136684|FEZF1|389549|FEZ family zinc finger 1##BC144367|FEZF1|389549|FEZ family zinc finger 1##AK300742|FEZF1|389549|FEZ family zinc finger 1##BC022038|RNF133|168433|ring finger protein 133##AF447589|RNF133|168433|ring finger protein 133##NM_139175|RNF133|168433|ring finger protein 133##AK098524|RNF133|168433|ring finger protein 133##AK058116|RNF148|378925|ring finger protein 148##AK098654|RNF148|378925|ring finger protein 148##BC029264|RNF148|378925|ring finger protein 148##NM_198085|RNF148|378925|ring finger protein 148	0.553763	CTCF.p2:-15:0.554
chr11	105958683	105958815	reg1012897.p1	9.620	+	NM_152433 NM_198439	-10285	-	AF136978 AF151057 AF151838 AF302110 NM_015423 TSC_hg19_v1_chr11_+_105948388 BC016728 AK312529 BC015470 AK293362 AB463408 CU677695 DQ891342 DQ894524	-10384	+	TSC_hg19_v1_chr11_-_105892952 AL834523 BC041118 AB058729 NM_032424	-65790	-	BC085622 TSC_hg19_v1_chr11_-_106889260 BC130484 BC130488 BC144033 NM_000855 X63282 Z50053	930339	-	AK293001 TSC_hg19_v1_chr11_-_107328552 BX649022 BX647832 BC107418 BC070142 BX648704 AK126881 NM_152434	1369790	-	AK293603 TSC_hg19_v1_chr11_-_107436464 BC015183 AK304413 AB218768 AK095523 NM_138775	1477695	-	NM_152433|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##NM_198439|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##AF136978|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151057|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151838|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF302110|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##NM_015423|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC016728|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK312529|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC015470|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK293362|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ891342|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ894524|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AL834523|KIAA1826|84437|KIAA1826##BC041118|KIAA1826|84437|KIAA1826##AB058729|KIAA1826|84437|KIAA1826##NM_032424|KIAA1826|84437|KIAA1826##BC130484|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC130488|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC144033|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_000855|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##X63282|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##Z50053|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##AK293001|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX649022|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX647832|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC107418|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC070142|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX648704|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK126881|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##NM_152434|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK293603|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##BC015183|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK304413|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AB218768|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK095523|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##NM_138775|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)	0.0	
chr1	169555696	169555805	reg1011835.p1	9.620	+	TSC_hg19_v1_chr1_-_169555717 AK291613 AK300469 NM_000130	-11	-	AB385005 AK226079 M14335 TSC_hg19_v1_chr1_-_169555700 M16967	-86	-	AF160812 TSC_hg19_v1_chr1_-_169455181 AF135488 BC018514 AK313779 NM_006996 AF153330	-100575	-	M25322 AK312884 BC068533 NM_003005	43612	-	AB528958 CU676702 DQ891376 DQ894554 AJ246000 X16150 X17519 BC020758 X16070 AK225713 AK312673 M25280 TSC_hg19_v1_chr1_-_169680762 NM_000655	125009	-	BC131551 M24736 M30640 BC142677 BC142711 AK314214 NM_000450 TSC_hg19_v1_chr1_-_169703221	147449	-	AK291613|F5|2153|coagulation factor V (proaccelerin, labile factor)##AK300469|F5|2153|coagulation factor V (proaccelerin, labile factor)##NM_000130|F5|2153|coagulation factor V (proaccelerin, labile factor)##AK226079|F5|2153|coagulation factor V (proaccelerin, labile factor)##M14335|F5|2153|coagulation factor V (proaccelerin, labile factor)##M16967|F5|2153|coagulation factor V (proaccelerin, labile factor)##AF160812|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AF135488|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##BC018514|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AK313779|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##NM_006996|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AF153330|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##M25322|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##AK312884|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##BC068533|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##NM_003005|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##DQ891376|SELL|6402|selectin L##DQ894554|SELL|6402|selectin L##AJ246000|SELL|6402|selectin L##X16150|SELL|6402|selectin L##X17519|SELL|6402|selectin L##BC020758|SELL|6402|selectin L##X16070|SELL|6402|selectin L##AK225713|SELL|6402|selectin L##AK312673|SELL|6402|selectin L##M25280|SELL|6402|selectin L##NM_000655|SELL|6402|selectin L##BC131551|SELE|6401|selectin E##M24736|SELE|6401|selectin E##M30640|SELE|6401|selectin E##BC142677|SELE|6401|selectin E##BC142711|SELE|6401|selectin E##AK314214|SELE|6401|selectin E##NM_000450|SELE|6401|selectin E	0.0	
chr2	154019738	154019836	reg1011204.p1	9.619	+	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-444643	+	BC028741 TSC_hg19_v1_chr2_+_153575133	-444656	+	TSC_hg19_v1_chr2_+_153575123 AK315657	-444672	+	AK311958 BC002908 AK074808 AB043585 NM_019845	315464	-	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	708657	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	1535402	+	BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##BC028741|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK315657|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	0.993375	CTCF.p2:-14:0.993
chr2	78900278	78900386	reg1012716.p1	9.619	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	-1150914	-	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-2962281	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-2962613	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	352506	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	414801	-	AK307292 NM_002909 TSC_hg19_v1_chr2_+_79347583	447204	+	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta##AK307292|REG1A|5967|regenerating islet-derived 1 alpha##NM_002909|REG1A|5967|regenerating islet-derived 1 alpha	1.250895	CTCF.p2:-24:0.875	CTCF.p2:49:0.376
chr3	197358970	197359082	reg1012605.p1	9.619	+	TSC_hg19_v1_chr3_-_197354756 BC067856 AK309924 BC094848 AK299863 BC080518 AK311713	-4273	-	NM_203315 TSC_hg19_v1_chr3_-_197300209	-58825	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	-76184	-	TSC_hg19_v1_chr3_-_197463770 BC033615 NM_014687	104760	-	AK303462 NM_001011537	117397	+	NM_001145642	117541	-	BC067856|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK309924|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC094848|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK299863|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC080518|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK311713|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##NM_203315|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC033615|KIAA0226|9711|KIAA0226##NM_014687|KIAA0226|9711|KIAA0226##AK303462|FYTTD1|84248|forty-two-three domain containing 1##NM_001011537|FYTTD1|84248|forty-two-three domain containing 1##NM_001145642|KIAA0226|9711|KIAA0226	0.788607	CTCF.p2:0:0.789
chr2	232382359	232382484	reg1013343.p1	9.618	+	BC033054 TSC_hg19_v1_chr2_-_232379076	-3339	-	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	-53186	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	-53286	-	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	12733	-	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	75196	+	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	190813	+	BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin##AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha	0.675157	CTCF.p2:-9:0.618
chr3	121811473	121811606	reg1012551.p2	9.617	+	NM_006889 NM_176892 U04343	-14817	+	NM_001206924 NM_001206925 NM_175862 AK294663 AK301237 AK316203 BC040261 L25259 AK291497 AK313103	-37285	+	AY672837 AY672839 BC044240 AY134857 TSC_hg19_v1_chr3_-_121741095 AK129974 NM_001199799 NM_001199800 NM_175924	-70492	-	NM_000388 U20759	90990	+	NM_001178065 U20760	91641	+	NM_005213 AK291308 BC010379 X05978 CR456914	232535	+	NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule##NM_001206924|CD86|942|CD86 molecule##NM_001206925|CD86|942|CD86 molecule##NM_175862|CD86|942|CD86 molecule##AK294663|CD86|942|CD86 molecule##AK301237|CD86|942|CD86 molecule##AK316203|CD86|942|CD86 molecule##BC040261|CD86|942|CD86 molecule##L25259|CD86|942|CD86 molecule##AK291497|CD86|942|CD86 molecule##AK313103|CD86|942|CD86 molecule##AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1##BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199799|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199800|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_000388|CASR|846|calcium-sensing receptor##U20759|CASR|846|calcium-sensing receptor##NM_001178065|CASR|846|calcium-sensing receptor##U20760|CASR|846|calcium-sensing receptor##NM_005213|CSTA|1475|cystatin A (stefin A)##AK291308|CSTA|1475|cystatin A (stefin A)##BC010379|CSTA|1475|cystatin A (stefin A)##X05978|CSTA|1475|cystatin A (stefin A)##CR456914|CSTA|1475|cystatin A (stefin A)	0.700335	CTCF.p2:-1:0.594
chr6	160524505	160524605	reg1013162.p1	9.617	+	TSC_hg19_v1_chr6_+_160390137 NM_000876 Y00285 J03528	-134422	+	BC069142 BC069581 BC110454 NM_002377 CU686912 CR542261	-196576	+	TSC_hg19_v1_chr6_+_160221313 AK097559 NM_173516 AK093139 AX747947 BC112246	-303212	+	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	18359	+	CU689064 BC039899 AK290787 X98333 AB075951 BC030978 NM_003058	155320	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	244839	+	NM_000876|IGF2R|3482|insulin-like growth factor 2 receptor##Y00285|IGF2R|3482|insulin-like growth factor 2 receptor##J03528|IGF2R|3482|insulin-like growth factor 2 receptor##BC069142|MAS1|4142|MAS1 oncogene##BC069581|MAS1|4142|MAS1 oncogene##BC110454|MAS1|4142|MAS1 oncogene##NM_002377|MAS1|4142|MAS1 oncogene##CR542261|MAS1|4142|MAS1 oncogene##AK097559|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_173516|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##AK093139|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##BC112246|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC039899|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AK290787|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##X98333|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AB075951|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC030978|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003058|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3	0.258699	CTCF.p2:0:0.259
chrX	5795427	5795553	reg1012745.p1	9.617	+	TSC_hg19_v1_chrX_-_3631668 NM_005044	-2163772	-	TSC_hg19_v1_chrX_-_3631645 X85545	-2163845	-	TSC_hg19_v1_chrX_-_3631619 BC041073	-2163948	-	AB033086 AF376803 AX773938 NM_020742	350397	-	AK055471 BC034018 NM_181332	351190	-	AF167078 AF167079 NM_016379	657668	-	NM_005044|PRKX|5613|protein kinase, X-linked##X85545|PRKX|5613|protein kinase, X-linked##BC041073|PRKX|5613|protein kinase, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A	0.912638	CTCF.p2:17:0.913
chr16	57829400	57829502	reg1011300.p1	9.616	+	TSC_hg19_v1_chr16_+_57769741 AB209250	-59727	+	TSC_hg19_v1_chr16_+_57769662 NM_005886	-59806	+	TSC_hg19_v1_chr16_+_57728717 NM_032269 AK292558 BC030661 BC036667 AK093035 AX747872	-100722	+	BC041132 AK299431 AK291737 NM_001130099	2350	-	TSC_hg19_v1_chr16_-_57836370 AB209290	6920	-	TSC_hg19_v1_chr16_-_57836404 AK307846 BC001211 AK304132 NM_001130100 NM_005550	6958	-	AB209250|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1##NM_005886|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1##NM_032269|CCDC135|84229|coiled-coil domain containing 135##AK292558|CCDC135|84229|coiled-coil domain containing 135##BC030661|CCDC135|84229|coiled-coil domain containing 135##BC036667|CCDC135|84229|coiled-coil domain containing 135##AK093035|CCDC135|84229|coiled-coil domain containing 135##BC041132|KIFC3|3801|kinesin family member C3##AK299431|KIFC3|3801|kinesin family member C3##AK291737|KIFC3|3801|kinesin family member C3##NM_001130099|KIFC3|3801|kinesin family member C3##AB209290|KIFC3|3801|kinesin family member C3##AK307846|KIFC3|3801|kinesin family member C3##BC001211|KIFC3|3801|kinesin family member C3##AK304132|KIFC3|3801|kinesin family member C3##NM_001130100|KIFC3|3801|kinesin family member C3##NM_005550|KIFC3|3801|kinesin family member C3	0.747702	CTCF.p2:3:0.748
chr19	54902705	54902845	reg1011409.p2	9.616	+	AK303261 TSC_hg19_v1_chr19_-_54882123 AK097869	-20683	-	TSC_hg19_v1_chr19_-_54876672 NM_002287 NM_021706	-26080	-	TSC_hg19_v1_chr19_-_54876541 AK290415 AK315419	-26224	-	AB188496 NM_001005367 NM_001201461 NM_020659 TSC_hg19_v1_chr19_+_54926657 AK289468 AK293468 BC065919 AF177909 BC011347	23876	+	AB162930 TSC_hg19_v1_chr19_+_54926723	23947	+	NM_052925	57289	+	AK303261|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK097869|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##NM_002287|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##NM_021706|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK290415|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK315419|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AB188496|TTYH1|57348|tweety homolog 1 (Drosophila)##NM_001005367|TTYH1|57348|tweety homolog 1 (Drosophila)##NM_001201461|TTYH1|57348|tweety homolog 1 (Drosophila)##NM_020659|TTYH1|57348|tweety homolog 1 (Drosophila)##AK289468|TTYH1|57348|tweety homolog 1 (Drosophila)##AK293468|TTYH1|57348|tweety homolog 1 (Drosophila)##BC065919|TTYH1|57348|tweety homolog 1 (Drosophila)##AF177909|TTYH1|57348|tweety homolog 1 (Drosophila)##BC011347|TTYH1|57348|tweety homolog 1 (Drosophila)##AB162930|TTYH1|57348|tweety homolog 1 (Drosophila)##NM_052925|LENG8|114823|leukocyte receptor cluster (LRC) member 8	0.993234	CTCF.p2:10:0.993
chr16	29653008	29653147	reg1011475.p1	9.615	+	AB040413 AB055226 TSC_hg19_v1_chr16_-_29625045	-28035	-	TSC_hg19_v1_chr16_-_29606667 AK316536	-46404	-	CU687812 AK304513 TSC_hg19_v1_chr16_-_29606405	-46732	-	TSC_hg19_v1_chr16_+_29674283 NM_001030288 X60502 BC012350	21255	+	TSC_hg19_v1_chr16_+_29674567 AK292626 AK313750	21488	+	TSC_hg19_v1_chr16_+_29674568 J04168 J04536 NM_003123	21496	+	AK304513|LOC440354|440354|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene##NM_001030288|SPN|6693|sialophorin##X60502|SPN|6693|sialophorin##BC012350|SPN|6693|sialophorin##AK292626|SPN|6693|sialophorin##AK313750|SPN|6693|sialophorin##J04536|SPN|6693|sialophorin##NM_003123|SPN|6693|sialophorin	0.945019	CTCF.p2:-23:0.945
chr21	38003151	38003282	reg1012594.p1	9.613	+	AJ566766 NM_001146077	-54350	-	AJ566765 NM_001146078	-88319	-	AF314090 AY355348 NM_001146079 NM_144492	-150829	-	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	68224	+	NM_005069 NM_009586 BC110444	68789	+	TSC_hg19_v1_chr21_-_38338991 AK307940 NM_001242784	335643	-	AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14##AJ566765|CLDN14|23562|claudin 14##NM_001146078|CLDN14|23562|claudin 14##AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14##NM_005069|SIM2|6493|single-minded homolog 2 (Drosophila)##NM_009586|SIM2|6493|single-minded homolog 2 (Drosophila)##BC110444|SIM2|6493|single-minded homolog 2 (Drosophila)##AK307940|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_001242784|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)	0.988354	CTCF.p2:-3:0.988
chr1	209775550	209775663	reg1012027.p1	9.612	+	NM_020439 AK095713 AK289675 AF428261 BC032787	-18546	+	AK091113 AX746785 NM_001104548	-173441	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-1357957	-	TSC_hg19_v1_chr1_-_209824718 NM_001017402	49073	-	L25541 NM_001127641 D37766 TSC_hg19_v1_chr1_-_209825771 AK296851 AK309524	50118	-	TSC_hg19_v1_chr1_-_209825820 BC058922 NM_000228	50218	-	NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_025179|PLXNA2|5362|plexin A2##NM_001017402|LAMB3|3914|laminin, beta 3##L25541|LAMB3|3914|laminin, beta 3##NM_001127641|LAMB3|3914|laminin, beta 3##D37766|LAMB3|3914|laminin, beta 3##AK296851|LAMB3|3914|laminin, beta 3##AK309524|LAMB3|3914|laminin, beta 3##BC058922|LAMB3|3914|laminin, beta 3##NM_000228|LAMB3|3914|laminin, beta 3	0.723275	CTCF.p2:-15:0.723
chr7	93429206	93429326	reg1012662.p1	9.612	+	AB022177 AK313996 NM_001164737 NM_001742	-225228	-	AB022178 NM_001164738	-240145	-	BC017888 NM_017667 NM_024553 TSC_hg19_v1_chr7_+_92861678 AK126478 AL833112 AK055965 AK299582 AB100163 BC108708 BC132740 BC132742 AB058764 BC152424 CU676100 AB385511	-567540	+	CU675117 DQ892533 DQ895744 L27624 AY691946 D29992 AK075427 AK024817 AK075425 AK092499 AK129833 AK313260 BC005330 NM_006528 TSC_hg19_v1_chr7_-_93520066	90763	-	BC029367 NM_021955	106553	+	NM_004126 BC009709	121790	+	AB022177|CALCR|799|calcitonin receptor##AK313996|CALCR|799|calcitonin receptor##NM_001164737|CALCR|799|calcitonin receptor##NM_001742|CALCR|799|calcitonin receptor##AB022178|CALCR|799|calcitonin receptor##NM_001164738|CALCR|799|calcitonin receptor##BC017888|CCDC132|55610|coiled-coil domain containing 132##NM_017667|CCDC132|55610|coiled-coil domain containing 132##NM_024553|CCDC132|55610|coiled-coil domain containing 132##AK126478|CCDC132|55610|coiled-coil domain containing 132##AL833112|CCDC132|55610|coiled-coil domain containing 132##AK055965|CCDC132|55610|coiled-coil domain containing 132##AK299582|CCDC132|55610|coiled-coil domain containing 132##AB100163|CCDC132|55610|coiled-coil domain containing 132##BC108708|CCDC132|55610|coiled-coil domain containing 132##BC132740|CCDC132|55610|coiled-coil domain containing 132##BC132742|CCDC132|55610|coiled-coil domain containing 132##AB058764|CCDC132|55610|coiled-coil domain containing 132##BC152424|CCDC132|55610|coiled-coil domain containing 132##DQ892533|TFPI2|7980|tissue factor pathway inhibitor 2##DQ895744|TFPI2|7980|tissue factor pathway inhibitor 2##L27624|TFPI2|7980|tissue factor pathway inhibitor 2##AY691946|TFPI2|7980|tissue factor pathway inhibitor 2##D29992|TFPI2|7980|tissue factor pathway inhibitor 2##AK075427|TFPI2|7980|tissue factor pathway inhibitor 2##AK024817|TFPI2|7980|tissue factor pathway inhibitor 2##AK075425|TFPI2|7980|tissue factor pathway inhibitor 2##AK092499|TFPI2|7980|tissue factor pathway inhibitor 2##AK129833|TFPI2|7980|tissue factor pathway inhibitor 2##AK313260|TFPI2|7980|tissue factor pathway inhibitor 2##BC005330|TFPI2|7980|tissue factor pathway inhibitor 2##NM_006528|TFPI2|7980|tissue factor pathway inhibitor 2##BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	0.31927	CTCF.p2:-10:0.319
chr1	107684802	107684941	reg1010759.p1	9.611	+	AB023193 TSC_hg19_v1_chr1_+_107683657	-1267	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-2129	+	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	-85506	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	546253	-	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	822729	-	AJ619961 NM_213651 AK292567	1050525	-	AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.973422	CTCF.p2:26:0.973
chr2	25352251	25352362	reg1010266.p2	9.611	+	TSC_hg19_v1_chr2_+_25264954 NM_014971 AB023170	-87329	+	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	-157439	-	AK294726 TSC_hg19_v1_chr2_-_25194607	-157761	-	NM_000939 NM_001035256	39252	-	TSC_hg19_v1_chr2_-_25466801 BC018214	114502	-	TSC_hg19_v1_chr2_-_25467080 BC023612	114829	-	NM_014971|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AB023170|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AK294726|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_000939|POMC|5443|proopiomelanocortin##NM_001035256|POMC|5443|proopiomelanocortin##BC018214|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.970589	CTCF.p2:-41:0.971
chr16	18274993	18275136	reg1014380.p1	9.610	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	-710259	-	TSC_hg19_v1_chr16_+_16326508 AB463143	-1948534	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1948576	+	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	298327	-	TSC_hg19_v1_chr16_-_18798077 AK127316	523032	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	526591	-	AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a	0.994613	CTCF.p2:-13:0.995
chr19	1826203	1826326	reg1012320.p1	9.610	+	AY302538 NM_001178002 TSC_hg19_v1_chr19_-_1812276 BC035162 NM_138813 AK125225 AK125969	-14027	-	TSC_hg19_v1_chr19_+_1776120 AK074606	-50077	+	NM_001080488 TSC_hg19_v1_chr19_+_1753823	-72512	+	AB384122 TSC_hg19_v1_chr19_-_1848439 AB032964 BC016923	22137	-	TSC_hg19_v1_chr19_-_1848471 BC032244 NM_020695	22197	-	TSC_hg19_v1_chr19_-_1863441 AF327440	37196	-	AY302538|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001178002|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##BC035162|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_138813|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125225|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125969|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001080488|ONECUT3|390874|one cut homeobox 3##AB032964|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC016923|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC032244|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##NM_020695|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##AF327440|KLF16|83855|Kruppel-like factor 16	0.998941	CTCF.p2:33:0.999
chr6	107318959	107319071	reg1010507.p2	9.609	+	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	-241518	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	-241735	-	TSC_hg19_v1_chr6_+_106960443 U83115	-358604	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	30457	+	BC131628 NM_001080450	116620	-	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	461715	-	NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##U83115|AIM1|202|absent in melanoma 1##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2	0.755709	CTCF.p2:-4:0.756
chr10	38265651	38265782	reg1013497.p1	9.608	+	AJ491696 NM_145011 TSC_hg19_v1_chr10_-_38265576 AK122958 BC036038 AK056452 AX721125	-189	-	BC146820 TSC_hg19_v1_chr10_-_38147013 AK299357	-118717	-	BC132915 BC132917 BC110869 BC021819 AJ491695 AJ492196 NM_021045 TSC_hg19_v1_chr10_-_38146539	-119298	-	TSC_hg19_v1_chr10_+_38299631 NM_006954 NM_006974 AK303445 AK292844 BC017760 AK027057 D31763	33879	+	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	117567	+	AK295332 AY829267 AF165514 AF165517 BC071987 TSC_hg19_v1_chr10_+_38645320 AK293968 AK307174 CU687208	379621	+	AJ491696|ZNF25|219749|zinc finger protein 25##NM_145011|ZNF25|219749|zinc finger protein 25##AK122958|ZNF25|219749|zinc finger protein 25##BC036038|ZNF25|219749|zinc finger protein 25##AK056452|ZNF25|219749|zinc finger protein 25##BC146820|ZNF248|57209|zinc finger protein 248##AK299357|ZNF248|57209|zinc finger protein 248##BC132915|ZNF248|57209|zinc finger protein 248##BC132917|ZNF248|57209|zinc finger protein 248##BC110869|ZNF248|57209|zinc finger protein 248##BC021819|ZNF248|57209|zinc finger protein 248##AJ491695|ZNF248|57209|zinc finger protein 248##AJ492196|ZNF248|57209|zinc finger protein 248##NM_021045|ZNF248|57209|zinc finger protein 248##NM_006954|ZNF33A|7581|zinc finger protein 33A##NM_006974|ZNF33A|7581|zinc finger protein 33A##AK303445|ZNF33A|7581|zinc finger protein 33A##AK292844|ZNF33A|7581|zinc finger protein 33A##BC017760|ZNF33A|7581|zinc finger protein 33A##AK027057|ZNF33A|7581|zinc finger protein 33A##D31763|ZNF33A|7581|zinc finger protein 33A##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A##AK295332|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AY829267|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165514|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165517|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC071987|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK293968|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK307174|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2	0.82728	CTCF.p2:0:0.827
chr12	81157718	81157849	reg1012258.p2	9.608	+	TSC_hg19_v1_chr12_+_81110690 NM_005593 BC069373 X14894 AB528948 BT019399	-47018	+	NM_002469 AK313287 X52011 BC017834 AB587443 CU676084 DQ893248 DQ896577 CR407641 CR541763	-56331	+	NM_001145026	-319658	+	TSC_hg19_v1_chr12_-_81331470 AK309256	173684	-	TSC_hg19_v1_chr12_-_81331487 AB528898 CR407680 BC099921 AK315321 BC046926 BC062332 BC118609 BC122561 AF087693 AF173081 NM_004664	173807	-	TSC_hg19_v1_chr12_+_81471857 BC009317 BC015769 NM_024560 AK025616 AX764482	314075	+	NM_005593|MYF5|4617|myogenic factor 5##BC069373|MYF5|4617|myogenic factor 5##X14894|MYF5|4617|myogenic factor 5##BT019399|MYF5|4617|myogenic factor 5##NM_002469|MYF6|4618|myogenic factor 6 (herculin)##AK313287|MYF6|4618|myogenic factor 6 (herculin)##X52011|MYF6|4618|myogenic factor 6 (herculin)##BC017834|MYF6|4618|myogenic factor 6 (herculin)##DQ893248|MYF6|4618|myogenic factor 6 (herculin)##DQ896577|MYF6|4618|myogenic factor 6 (herculin)##CR407641|MYF6|4618|myogenic factor 6 (herculin)##CR541763|MYF6|4618|myogenic factor 6 (herculin)##NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q##AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)##CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)##BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)##AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)##BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)##BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)##BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)##BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)##AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)##AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)##NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)##BC009317|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##BC015769|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##NM_024560|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AK025616|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AX764482|ACSS3|79611|acyl-CoA synthetase short-chain family member 3	0.714796	CTCF.p2:-8:0.715
chr2	183515617	183515721	reg1011357.p2	9.608	+	AK295657 AB384753 DQ892369 DQ893372 DQ895578 DQ896694 AF110237 NM_005019 BC022480 AF110240 AF110236 NM_001003683 U40370 AK294239	-128385	-	NM_001080545 AK129898 AF494535 BX647581 BC017943	-665020	+	TSC_hg19_v1_chr2_+_182756689 BC052581 BC064499 BC028706 AK291745 BX647257 AB116937 AB385517 BX647967 AK304238 BX648888	-758876	+	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	65405	+	TSC_hg19_v1_chr2_+_183582683 BC107425 AF314529 AY089971 HQ258514 HQ258651 AL832646 AK027450	67078	+	TSC_hg19_v1_chr2_+_183608333 AK074905	92681	+	AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC052581|SSFA2|6744|sperm specific antigen 2##BC064499|SSFA2|6744|sperm specific antigen 2##BC028706|SSFA2|6744|sperm specific antigen 2##AK291745|SSFA2|6744|sperm specific antigen 2##BX647257|SSFA2|6744|sperm specific antigen 2##AB116937|SSFA2|6744|sperm specific antigen 2##BX647967|SSFA2|6744|sperm specific antigen 2##AK304238|SSFA2|6744|sperm specific antigen 2##BX648888|SSFA2|6744|sperm specific antigen 2##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC107425|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF314529|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY089971|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258514|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258651|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832646|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027450|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK074905|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	0.720498	CTCF.p2:23:0.720
chr4	17550863	17550979	reg1010890.p1	9.608	+	BC127863 NM_001079827	-34134	+	AB528218 AM393718 DQ891926 DQ895113 CU674280 TSC_hg19_v1_chr4_-_17513714 X04882 BC000576 AK124382 AK296622 AK223437 AK289773 NM_000320	-37155	-	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	-650536	-	TSC_hg19_v1_chr4_+_17578852 NM_015907	27961	+	TSC_hg19_v1_chr4_+_17579057 BC065564 CR457128 AK022055	28155	+	TSC_hg19_v1_chr4_+_17579121 AK298613 AK307723 AK225511 BC006199 AK298790	28209	+	BC127863|CLRN2|645104|clarin 2##NM_001079827|CLRN2|645104|clarin 2##AM393718|QDPR|5860|quinoid dihydropteridine reductase##DQ891926|QDPR|5860|quinoid dihydropteridine reductase##DQ895113|QDPR|5860|quinoid dihydropteridine reductase##X04882|QDPR|5860|quinoid dihydropteridine reductase##BC000576|QDPR|5860|quinoid dihydropteridine reductase##AK124382|QDPR|5860|quinoid dihydropteridine reductase##AK296622|QDPR|5860|quinoid dihydropteridine reductase##AK223437|QDPR|5860|quinoid dihydropteridine reductase##AK289773|QDPR|5860|quinoid dihydropteridine reductase##NM_000320|QDPR|5860|quinoid dihydropteridine reductase##AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2##NM_015907|LAP3|51056|leucine aminopeptidase 3##BC065564|LAP3|51056|leucine aminopeptidase 3##CR457128|LAP3|51056|leucine aminopeptidase 3##AK022055|LAP3|51056|leucine aminopeptidase 3##AK298613|LAP3|51056|leucine aminopeptidase 3##AK307723|LAP3|51056|leucine aminopeptidase 3##AK225511|LAP3|51056|leucine aminopeptidase 3##BC006199|LAP3|51056|leucine aminopeptidase 3##AK298790|LAP3|51056|leucine aminopeptidase 3	0.998449	CTCF.p2:-32:0.998
chr12	116453456	116453588	reg1012589.p2	9.607	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-1331382	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1607304	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1609598	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	261428	-	TSC_hg19_v1_chr12_-_116715263 AY338463	261638	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	517707	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.11389	
chr14	90865982	90866110	reg1011836.p1	9.607	+	TSC_hg19_v1_chr14_+_90863372 BC011834 BC047523 U16851 BC000454 BC008597 AK289937 M27319	-2619	+	TSC_hg19_v1_chr14_+_90863329 NM_006888	-2723	+	BC008925 BC033136 BC098568 TSC_hg19_v1_chr14_-_90798286 AK000870 AK294958 BC021805 NM_017970	-67680	-	AB527232 TSC_hg19_v1_chr14_-_91282750	416652	-	NM_001010854 TSC_hg19_v1_chr14_-_91282765	416719	-	TSC_hg19_v1_chr14_-_91526731 CU677851	660708	-	BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008925|C14orf102|55051|chromosome 14 open reading frame 102##BC033136|C14orf102|55051|chromosome 14 open reading frame 102##BC098568|C14orf102|55051|chromosome 14 open reading frame 102##AK000870|C14orf102|55051|chromosome 14 open reading frame 102##AK294958|C14orf102|55051|chromosome 14 open reading frame 102##BC021805|C14orf102|55051|chromosome 14 open reading frame 102##NM_017970|C14orf102|55051|chromosome 14 open reading frame 102##NM_001010854|TTC7B|145567|tetratricopeptide repeat domain 7B	0.456775	CTCF.p2:-10:0.457
chr15	45599471	45599605	reg1012753.p1	9.607	+	AK222709 NM_004212 U84392 AK291974	-55097	+	AK096267 NM_138356	-106166	-	TSC_hg19_v1_chr15_-_45480165 AK094391 AK303749	-119374	-	TSC_hg19_v1_chr15_-_45670743 CU678590 S68805 BC004141 AK098055 AK223585 AK294995 AK298350	71201	-	TSC_hg19_v1_chr15_-_45670958 NM_001482	71429	-	NM_024063 TSC_hg19_v1_chr15_+_45694551 AK291457 AK023232 AK225463 BC051861 BC000981 AK022348	95014	+	AK222709|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##NM_004212|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##U84392|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK291974|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK096267|SHF|90525|Src homology 2 domain containing F##NM_138356|SHF|90525|Src homology 2 domain containing F##AK094391|SHF|90525|Src homology 2 domain containing F##AK303749|SHF|90525|Src homology 2 domain containing F##S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##NM_024063|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK291457|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK023232|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK225463|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC051861|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC000981|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK022348|SPATA5L1|79029|spermatogenesis associated 5-like 1	0.996787	CTCF.p2:-24:0.997
chr21	18759485	18759616	reg1014676.p1	9.607	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	-1657009	+	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	-1657225	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	-2322333	-	TSC_hg19_v1_chr21_+_18885168 NM_001207063 NM_001207064 NM_001207065 NM_001207066 NM_001338	125613	+	TSC_hg19_v1_chr21_+_18885364 BC003684 AK313526 BC010536 Y07593 DQ891181 DQ894363 AF124598 AY072910 AY072911 AY072912 BT019876 GU474812 U90716	125821	+	D64110 TSC_hg19_v1_chr21_-_18985177 BC011957	225590	-	NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor##BC003684|CXADR|1525|coxsackie virus and adenovirus receptor##AK313526|CXADR|1525|coxsackie virus and adenovirus receptor##BC010536|CXADR|1525|coxsackie virus and adenovirus receptor##Y07593|CXADR|1525|coxsackie virus and adenovirus receptor##DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor##DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor##AF124598|CXADR|1525|coxsackie virus and adenovirus receptor##AY072910|CXADR|1525|coxsackie virus and adenovirus receptor##AY072911|CXADR|1525|coxsackie virus and adenovirus receptor##AY072912|CXADR|1525|coxsackie virus and adenovirus receptor##BT019876|CXADR|1525|coxsackie virus and adenovirus receptor##GU474812|CXADR|1525|coxsackie virus and adenovirus receptor##U90716|CXADR|1525|coxsackie virus and adenovirus receptor##D64110|BTG3|10950|BTG family, member 3##BC011957|BTG3|10950|BTG family, member 3	0.990779	CTCF.p2:-12:0.991
chr5	136105901	136106018	reg1012833.p1	9.607	+	NM_001167576 NM_001167577 NM_020389	-404796	-	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-637375	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-637430	+	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	728282	-	TSC_hg19_v1_chr5_-_136834420 AK094489	728468	-	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	729021	-	NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.802037	CTCF.p2:11:0.802
chr7	141354401	141354534	reg1015113.p1	9.607	+	NM_018238 TSC_hg19_v1_chr7_+_141251215 AK304502 AK001704 AK299131 AK222769 AJ278150 BC009775	-103310	+	NM_001195278	-580436	+	NM_053035 TSC_hg19_v1_chr7_-_140714792	-639681	-	TSC_hg19_v1_chr7_-_141401967 AB032973 NM_001080392 AB384573	47467	-	AK131218 NM_001105558	53685	+	TSC_hg19_v1_chr7_+_141438200 BC008402 BC093054 AK294393 AF277319 M94556 NM_003143 AK311200 AK313033 BC000895	83797	+	NM_018238|AGK|55750|acylglycerol kinase##AK304502|AGK|55750|acylglycerol kinase##AK001704|AGK|55750|acylglycerol kinase##AK299131|AGK|55750|acylglycerol kinase##AK222769|AGK|55750|acylglycerol kinase##AJ278150|AGK|55750|acylglycerol kinase##BC009775|AGK|55750|acylglycerol kinase##NM_001195278|LOC100507421|100507421|transmembrane protein 178-like##NM_053035|MRPS33|51650|mitochondrial ribosomal protein S33##AB032973|KIAA1147|57189|KIAA1147##NM_001080392|KIAA1147|57189|KIAA1147##AK131218|WEE2|494551|WEE1 homolog 2 (S. pombe)##NM_001105558|WEE2|494551|WEE1 homolog 2 (S. pombe)##BC008402|SSBP1|6742|single-stranded DNA binding protein 1##BC093054|SSBP1|6742|single-stranded DNA binding protein 1##AK294393|SSBP1|6742|single-stranded DNA binding protein 1##AF277319|SSBP1|6742|single-stranded DNA binding protein 1##M94556|SSBP1|6742|single-stranded DNA binding protein 1##NM_003143|SSBP1|6742|single-stranded DNA binding protein 1##AK313033|SSBP1|6742|single-stranded DNA binding protein 1##BC000895|SSBP1|6742|single-stranded DNA binding protein 1	0.727439	CTCF.p2:-11:0.727
chr16	75551398	75551531	reg1012715.p2	9.606	+	TSC_hg19_v1_chr16_-_75529303 AK311527 AK093904	-22167	-	TSC_hg19_v1_chr16_-_75529279 AF219990	-22185	-	AF280086 NM_021615	-22539	-	AF246718 NM_024533	17603	-	CU679755 TSC_hg19_v1_chr16_-_75590137 AK096650 NM_001077416 BC010609 AK307263 AK025820 BC063677 AY358612 AK290483 NM_001077418 NM_001077419	38702	-	AB030710 NM_007285 TSC_hg19_v1_chr16_+_75600274 BC029601	48797	+	AF280086|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6##NM_021615|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6##AF246718|CHST5|23563|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5##NM_024533|CHST5|23563|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5##AK096650|TMEM231|79583|transmembrane protein 231##NM_001077416|TMEM231|79583|transmembrane protein 231##BC010609|TMEM231|79583|transmembrane protein 231##AK307263|TMEM231|79583|transmembrane protein 231##AK025820|TMEM231|79583|transmembrane protein 231##BC063677|TMEM231|79583|transmembrane protein 231##AY358612|TMEM231|79583|transmembrane protein 231##AK290483|TMEM231|79583|transmembrane protein 231##NM_001077418|TMEM231|79583|transmembrane protein 231##NM_001077419|TMEM231|79583|transmembrane protein 231##AB030710|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##NM_007285|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC029601|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2	0.735326	CTCF.p2:-7:0.735
chr21	39047631	39047751	reg1011474.p2	9.606	+	NM_130438 NM_001396 U52373 D85759 U58496	-255071	+	D86550 NM_130436	-256485	+	AF108830 NM_101395 AB015283 AB015284	-307821	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	241020	-	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	445710	-	BC013327 NM_002243	580972	+	NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.753935	CTCF.p2:8:0.754
chr2	169988547	169988693	reg1012806.p1	9.606	+	AY359046 NM_001142271	-51004	+	AF529287 NM_001142270	-59574	+	TSC_hg19_v1_chr2_+_169926132 AF343729 AF240697 AF240698 BC058883	-62490	+	AY265358 AY265357 TSC_hg19_v1_chr2_-_170218991	230361	-	U33837 TSC_hg19_v1_chr2_-_170219045 AK295005 NM_004525	230459	-	TSC_hg19_v1_chr2_+_170335996 AK302851 AY604003 AY604004 NM_152384 BC044593 AL834305 AK312680 AM393220 AB528077 CU692220	347385	+	AY359046|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##NM_001142271|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AF529287|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##NM_001142270|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AF343729|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AF240697|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AF240698|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##BC058883|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AY265358|LRP2|4036|low density lipoprotein receptor-related protein 2##AY265357|LRP2|4036|low density lipoprotein receptor-related protein 2##U33837|LRP2|4036|low density lipoprotein receptor-related protein 2##AK295005|LRP2|4036|low density lipoprotein receptor-related protein 2##NM_004525|LRP2|4036|low density lipoprotein receptor-related protein 2##AY604003|BBS5|129880|Bardet-Biedl syndrome 5##AY604004|BBS5|129880|Bardet-Biedl syndrome 5##NM_152384|BBS5|129880|Bardet-Biedl syndrome 5##BC044593|BBS5|129880|Bardet-Biedl syndrome 5##AL834305|BBS5|129880|Bardet-Biedl syndrome 5##AK312680|BBS5|129880|Bardet-Biedl syndrome 5##AM393220|BBS5|129880|Bardet-Biedl syndrome 5	0.99979	CTCF.p2:16:1.000
chr10	88720304	88720426	reg1013416.p1	9.605	+	NM_003087 AK223367 AK311652 BC014098 AK312141 AF017256 AF411524 EU019993 AF010126 DQ892334 DQ892505 DQ895719 EU176715 AB464279 CR541788 CR541790	-1995	+	TSC_hg19_v1_chr10_-_88717330 BC072456 AK304727 AK023527 AK293822 BC094744 BC064415 AK308401 NM_024756	-2994	-	TSC_hg19_v1_chr10_+_88516526 NM_004329 BC028383 AK291764 Z22535	-203878	+	NM_006829 TSC_hg19_v1_chr10_+_88728238 AK304688 AK312031 BC004471 D45370	7863	+	AK097165 NM_133447	10132	+	TSC_hg19_v1_chr10_-_88730968 AK128041	10632	-	NM_003087|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK223367|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##BC014098|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK312141|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF017256|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF411524|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU019993|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF010126|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892334|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892505|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ895719|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU176715|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541788|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541790|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##BC072456|MMRN2|79812|multimerin 2##AK304727|MMRN2|79812|multimerin 2##AK023527|MMRN2|79812|multimerin 2##AK293822|MMRN2|79812|multimerin 2##BC094744|MMRN2|79812|multimerin 2##BC064415|MMRN2|79812|multimerin 2##AK308401|MMRN2|79812|multimerin 2##NM_024756|MMRN2|79812|multimerin 2##NM_004329|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC028383|BMPR1A|657|bone morphogenetic protein receptor, type IA##AK291764|BMPR1A|657|bone morphogenetic protein receptor, type IA##Z22535|BMPR1A|657|bone morphogenetic protein receptor, type IA##NM_006829|C10orf116|10974|chromosome 10 open reading frame 116##AK312031|C10orf116|10974|chromosome 10 open reading frame 116##BC004471|C10orf116|10974|chromosome 10 open reading frame 116##D45370|C10orf116|10974|chromosome 10 open reading frame 116##AK097165|AGAP11|119385|ankyrin repeat and GTPase domain Arf GTPase activating protein 11##NM_133447|AGAP11|119385|ankyrin repeat and GTPase domain Arf GTPase activating protein 11##AK128041|LOC100133190|100133190|uncharacterized LOC100133190	1.249067	CTCF.p2:-8:0.886	CTCF.p2:-38:0.363
chr16	24516187	24516314	reg1014283.p1	9.605	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	-248552	+	AK055453 TSC_hg19_v1_chr16_+_24267474	-248776	+	BC037899 NM_006539 AK095553	-249376	+	TSC_hg19_v1_chr16_+_24550886 NM_006910 NM_018703 NM_032626	34643	+	AF063596 BC101139 BC101140 BC101141 BC101142 BC114353 BC114354 BC118667 BC139830 BC029352 BC063524 AB112074 AB112075 BX648661 TSC_hg19_v1_chr16_+_24552052	35614	+	BC029649 TSC_hg19_v1_chr16_+_24567629	51378	+	BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006910|RBBP6|5930|retinoblastoma binding protein 6##NM_018703|RBBP6|5930|retinoblastoma binding protein 6##NM_032626|RBBP6|5930|retinoblastoma binding protein 6##AF063596|RBBP6|5930|retinoblastoma binding protein 6##BC101139|RBBP6|5930|retinoblastoma binding protein 6##BC101140|RBBP6|5930|retinoblastoma binding protein 6##BC101141|RBBP6|5930|retinoblastoma binding protein 6##BC101142|RBBP6|5930|retinoblastoma binding protein 6##BC114353|RBBP6|5930|retinoblastoma binding protein 6##BC114354|RBBP6|5930|retinoblastoma binding protein 6##BC118667|RBBP6|5930|retinoblastoma binding protein 6##BC139830|RBBP6|5930|retinoblastoma binding protein 6##BC029352|RBBP6|5930|retinoblastoma binding protein 6##BC063524|RBBP6|5930|retinoblastoma binding protein 6##AB112074|RBBP6|5930|retinoblastoma binding protein 6##AB112075|RBBP6|5930|retinoblastoma binding protein 6##BX648661|RBBP6|5930|retinoblastoma binding protein 6##BC029649|RBBP6|5930|retinoblastoma binding protein 6	0.769647	CTCF.p2:8:0.770
chr11	116384772	116384855	reg1011462.p1	9.604	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-1009633	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-1296165	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1835565	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	258885	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	273902	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	273925	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.983101	CTCF.p2:-2:0.983
chr18	62076881	62076998	reg1014113.p1	9.604	+	NM_001031848 NM_002640 NM_198833 AK300391 L40377 TSC_hg19_v1_chr18_+_61637345 BC034528 U92984 BX571754 AK313782	-439626	+	NM_001123366	-460352	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	-494195	+	AJ007611 NM_033646	1340548	+	TSC_hg19_v1_chr18_+_63417845 BC036786	1340927	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	1341263	+	NM_001031848|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_002640|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_198833|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK300391|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##L40377|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BC034528|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##U92984|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BX571754|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK313782|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2	0.975861	CTCF.p2:14:0.976
chr5	83384949	83385064	reg1013503.p1	9.603	+	AK313713 NM_001884 X17405 X78076 X78075	-368072	-	NM_001126336 NM_001164097 NM_001164098 NM_004385 TSC_hg19_v1_chr5_+_82767562 U16306 U26555 X15998 AK307642 AB209491 BC050524 D32039	-617389	+	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	-1011623	+	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	295240	-	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	295658	-	TSC_hg19_v1_chr5_+_85913757 AK026505	2528752	+	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001126336|VCAN|1462|versican##NM_001164097|VCAN|1462|versican##NM_001164098|VCAN|1462|versican##NM_004385|VCAN|1462|versican##U16306|VCAN|1462|versican##U26555|VCAN|1462|versican##X15998|VCAN|1462|versican##AK307642|VCAN|1462|versican##AB209491|VCAN|1462|versican##BC050524|VCAN|1462|versican##D32039|VCAN|1462|versican##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc	0.482103	CTCF.p2:-23:0.482
chr8	6893402	6893509	reg1013178.p1	9.603	+	BC093791 BC112188 BC069423 M21130 M23281 BC119706 X52053 BC027917 M26602 NM_005217 X13621 NM_001042500 NM_004084	-17656	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	-36755	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	-55865	-	BC107079 BC069690 NM_021010	20799	-	NM_001164452 NM_001164456	220970	+	NM_001164452 NM_001164456	243836	+	BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M23281|DEFA3|1668|defensin, alpha 3, neutrophil-specific##BC119706|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X52053|DEFA1|1667|defensin, alpha 1##BC027917|DEFA3|1668|defensin, alpha 3, neutrophil-specific##M26602|DEFA1|1667|defensin, alpha 1##NM_005217|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X13621|DEFA3|1668|defensin, alpha 3, neutrophil-specific##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC107079|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC069690|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##NM_021010|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13	0.235575	CTCF.p2:0:0.236
chr9	140301544	140301661	reg1010729.p1	9.603	+	BC053618 NM_001004354 TSC_hg19_v1_chr9_-_140196724	-104882	-	TSC_hg19_v1_chr9_+_140172277 AK000252 NM_017723	-129317	+	TSC_hg19_v1_chr9_+_140149888 AF464935 AB384577 AM393289	-151679	+	BC065002 TSC_hg19_v1_chr9_-_140317615 BC110879 AK000440 AK094438 BC039252 BC037355	16008	-	TSC_hg19_v1_chr9_-_140317652 BC033079 BC069205	16074	-	NM_017820 TSC_hg19_v1_chr9_-_140317724	16116	-	BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein##NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein##AK000252|C9orf167|54863|chromosome 9 open reading frame 167##NM_017723|C9orf167|54863|chromosome 9 open reading frame 167##AF464935|COBRA1|25920|cofactor of BRCA1##AM393289|COBRA1|25920|cofactor of BRCA1##BC065002|EXD3|54932|exonuclease 3'-5' domain containing 3##BC110879|EXD3|54932|exonuclease 3'-5' domain containing 3##AK000440|EXD3|54932|exonuclease 3'-5' domain containing 3##AK094438|EXD3|54932|exonuclease 3'-5' domain containing 3##BC039252|EXD3|54932|exonuclease 3'-5' domain containing 3##BC037355|EXD3|54932|exonuclease 3'-5' domain containing 3##BC033079|EXD3|54932|exonuclease 3'-5' domain containing 3##BC069205|EXD3|54932|exonuclease 3'-5' domain containing 3##NM_017820|EXD3|54932|exonuclease 3'-5' domain containing 3	0.080782	
chrUn_gl000248	5664	5769	reg1012777.p2	9.603	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999627	CTCF.p2:-8:1.000
chrX	101601007	101601139	reg1013248.p1	9.603	+	NM_001099686 NM_022053 AK308255 AJ277526 BC015020	-98940	+	NM_001159560 BC092450 AY833564 BC042818 BC106955 NM_001012978	-190200	-	BC071675 NM_001006938 TSC_hg19_v1_chrX_-_101397444	-203666	-	BC015020 AJ277526 AK308255 NM_001099686 NM_022053	93815	-	AF086495 BC000183 AK311771 D82345 NM_021992	170596	-	AK096692 NM_001168479 NM_001168480 NM_001168485 TSC_hg19_v1_chrX_+_101854110 BC064983 NM_001199818	253112	+	NM_001099686|NXF2B|728343|nuclear RNA export factor 2B##NM_022053|NXF2|56001|nuclear RNA export factor 2##AK308255|NXF2B|728343|nuclear RNA export factor 2B##AJ277526|NXF2|56001|nuclear RNA export factor 2##BC015020|NXF2|56001|nuclear RNA export factor 2##NM_001159560|BEX5|340542|brain expressed, X-linked 5##BC092450|BEX5|340542|brain expressed, X-linked 5##AY833564|BEX5|340542|brain expressed, X-linked 5##BC042818|BEX5|340542|brain expressed, X-linked 5##BC106955|BEX5|340542|brain expressed, X-linked 5##NM_001012978|BEX5|340542|brain expressed, X-linked 5##BC071675|TCEAL6|158931|transcription elongation factor A (SII)-like 6##NM_001006938|TCEAL6|158931|transcription elongation factor A (SII)-like 6##BC015020|NXF2|56001|nuclear RNA export factor 2##AJ277526|NXF2|56001|nuclear RNA export factor 2##AK308255|NXF2B|728343|nuclear RNA export factor 2B##NM_001099686|NXF2B|728343|nuclear RNA export factor 2B##NM_022053|NXF2|56001|nuclear RNA export factor 2##AF086495|TMSB15A|11013|thymosin beta 15a##BC000183|TMSB15A|11013|thymosin beta 15a##AK311771|TMSB15B|286527|thymosin beta 15B##D82345|TMSB15A|11013|thymosin beta 15a##NM_021992|TMSB15A|11013|thymosin beta 15a##AK096692|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001168479|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001168480|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001168485|ARMCX5|64860|armadillo repeat containing, X-linked 5##BC064983|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001199818|ARMCX5-GPRASP2|100528062|ARMCX5-GPRASP2 readthrough	0.983182	CTCF.p2:0:0.983
chr5	141193739	141193853	reg1013366.p1	9.602	+	TSC_hg19_v1_chr5_-_141061801 NM_022481	-131979	-	AJ310567 TSC_hg19_v1_chr5_-_141061794 AK091385 AX746950 AK290052	-132024	-	TSC_hg19_v1_chr5_-_141030986 AY217346 NM_033449	-162813	-	CU690208 TSC_hg19_v1_chr5_-_141257848	64043	-	BC035812 NM_002587 NM_032420 BC051287 BC075821 TSC_hg19_v1_chr5_-_141257976 AK289512	64163	-	TSC_hg19_v1_chr5_+_141303403 NM_001142603 NM_014773 BC007855 D50931 AK292869	109613	+	NM_022481|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AJ310567|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK091385|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK290052|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AY217346|FCHSD1|89848|FCH and double SH3 domains 1##NM_033449|FCHSD1|89848|FCH and double SH3 domains 1##BC035812|PCDH1|5097|protocadherin 1##NM_002587|PCDH1|5097|protocadherin 1##NM_032420|PCDH1|5097|protocadherin 1##BC051287|PCDH1|5097|protocadherin 1##BC075821|PCDH1|5097|protocadherin 1##AK289512|PCDH1|5097|protocadherin 1##NM_001142603|KIAA0141|9812|KIAA0141##NM_014773|KIAA0141|9812|KIAA0141##BC007855|KIAA0141|9812|KIAA0141##D50931|KIAA0141|9812|KIAA0141##AK292869|KIAA0141|9812|KIAA0141	0.984599	CTCF.p2:17:0.985
chr2	11969481	11969627	reg1012905.p1	9.601	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-82779	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-159263	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-286711	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	887699	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	888362	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	888843	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.990957	CTCF.p2:-17:0.991
chr3	182897165	182897317	reg1012610.p2	9.601	+	TSC_hg19_v1_chr3_-_182880523 AB013924 AK313172 BC032940 NM_014398	-16677	-	TSC_hg19_v1_chr3_-_182880435 DQ892118	-16802	-	BC036395 TSC_hg19_v1_chr3_-_182833987	-63318	-	TSC_hg19_v1_chr3_+_182970969 NM_032047 AK074424	73707	+	AB209517 TSC_hg19_v1_chr3_+_182971343	74037	+	TSC_hg19_v1_chr3_+_182971608 AK091474 AX747008	74365	+	AB013924|LAMP3|27074|lysosomal-associated membrane protein 3##AK313172|LAMP3|27074|lysosomal-associated membrane protein 3##BC032940|LAMP3|27074|lysosomal-associated membrane protein 3##NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3##DQ892118|LAMP3|27074|lysosomal-associated membrane protein 3##BC036395|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	0.06629	
chr6	74036456	74036580	reg1011527.p2	9.601	+	AK090984 BC035766 CR936715 NM_001251874	-16632	-	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	-63545	+	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	-63652	-	BC137549 BC137558 NM_001025290	27480	-	AB211062 NM_001017361 BC132844 BC137160 HQ258760	35905	+	EU290647 NM_001080507	42996	-	AK090984|C6orf147|387097|chromosome 6 open reading frame 147##NM_001251874|KHDC1|80759|KH homology domain containing 1##BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1##BC137549|DPPA5|340168|developmental pluripotency associated 5##BC137558|DPPA5|340168|developmental pluripotency associated 5##NM_001025290|DPPA5|340168|developmental pluripotency associated 5##AB211062|C6orf221|154288|chromosome 6 open reading frame 221##NM_001017361|C6orf221|154288|chromosome 6 open reading frame 221##BC132844|C6orf221|154288|chromosome 6 open reading frame 221##BC137160|C6orf221|154288|chromosome 6 open reading frame 221##HQ258760|C6orf221|154288|chromosome 6 open reading frame 221##EU290647|OOEP|441161|oocyte expressed protein homolog (dog)##NM_001080507|OOEP|441161|oocyte expressed protein homolog (dog)	0.518059	CTCF.p2:7:0.518
chr17	19912576	19912674	reg1011685.p2	9.600	+	TSC_hg19_v1_chr17_-_19881144 AK295180	-31467	-	AB590263 CU677815 DQ270159 DQ891477 DQ894666 TSC_hg19_v1_chr17_-_19881134 AK312438 BC017055 AF037439 NM_007202	-31563	-	TSC_hg19_v1_chr17_-_19771250 BC034988 AB014523 NM_001142610 NM_014683 BC039310	-141482	-	TSC_hg19_v1_chr17_+_19912678 AK094274 NM_001243439 AK295093	43	+	TSC_hg19_v1_chr17_+_19976949 AK314341	64277	+	AY816328 AY816329 NM_001033553 NM_152904 AB041533	77709	+	AK295180|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ270159|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ891477|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ894666|AKAP10|11216|A kinase (PRKA) anchor protein 10##AK312438|AKAP10|11216|A kinase (PRKA) anchor protein 10##BC017055|AKAP10|11216|A kinase (PRKA) anchor protein 10##AF037439|AKAP10|11216|A kinase (PRKA) anchor protein 10##NM_007202|AKAP10|11216|A kinase (PRKA) anchor protein 10##BC034988|ULK2|9706|unc-51-like kinase 2 (C. elegans)##AB014523|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_001142610|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_014683|ULK2|9706|unc-51-like kinase 2 (C. elegans)##BC039310|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_001243439|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK295093|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK314341|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816328|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816329|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033553|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_152904|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AB041533|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	0.897745	CTCF.p2:0:0.898
chr1	40004993	40005102	reg1012281.p1	9.599	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	-47702	+	TSC_hg19_v1_chr1_+_39922264 AK023821	-82728	+	NM_015038	-129872	+	BC029969 TSC_hg19_v1_chr1_-_40042150	37064	-	U75686 BC065540 TSC_hg19_v1_chr1_-_40042460 BC071591	37390	-	BC094755 TSC_hg19_v1_chr1_-_40042463	37429	-	AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##NM_015038|KIAA0754|643314|KIAA0754##BC029969|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##U75686|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC065540|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC071591|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC094755|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)	0.95914	CTCF.p2:12:0.959
chr1	224303973	224304118	reg1012020.p2	9.598	+	NM_001136115 NM_015176 TSC_hg19_v1_chr1_+_224301812 AK001628 AK307892 BC031576 AK303381 CU689186	-2235	+	NM_001031685 NM_005426 TSC_hg19_v1_chr1_-_224033682	-270351	-	TSC_hg19_v1_chr1_-_224033620 BC046150 AJ318888 U58334 BC058918	-270422	-	TSC_hg19_v1_chr1_+_224370925 BC000961 NM_003676	66877	+	TSC_hg19_v1_chr1_+_224370941 AK308232 AF466375 AY423730 AF002668 CU674476	66942	+	TSC_hg19_v1_chr1_-_224517875 BC012105 AK298244 AK297396 AK298826 AK293923 AK297070 BC005897 U78772 U68140 NM_001243146 NM_001243147 NM_002533 NM_206840	213807	-	NM_001136115|FBXO28|23219|F-box protein 28##NM_015176|FBXO28|23219|F-box protein 28##AK001628|FBXO28|23219|F-box protein 28##AK307892|FBXO28|23219|F-box protein 28##BC031576|FBXO28|23219|F-box protein 28##AK303381|FBXO28|23219|F-box protein 28##NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2##BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2##AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2##U58334|TP53BP2|7159|tumor protein p53 binding protein, 2##BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2##BC000961|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_003676|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AK308232|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF466375|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AY423730|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF002668|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##BC012105|NVL|4931|nuclear VCP-like##AK298244|NVL|4931|nuclear VCP-like##AK297396|NVL|4931|nuclear VCP-like##AK298826|NVL|4931|nuclear VCP-like##AK293923|NVL|4931|nuclear VCP-like##AK297070|NVL|4931|nuclear VCP-like##BC005897|NVL|4931|nuclear VCP-like##U78772|NVL|4931|nuclear VCP-like##U68140|NVL|4931|nuclear VCP-like##NM_001243146|NVL|4931|nuclear VCP-like##NM_001243147|NVL|4931|nuclear VCP-like##NM_002533|NVL|4931|nuclear VCP-like##NM_206840|NVL|4931|nuclear VCP-like	0.993712	CTCF.p2:-22:0.994
chr1	36240391	36240510	reg1013093.p2	9.598	+	TSC_hg19_v1_chr1_-_36235569 BC113116 BC115023 BC115024 BC115025 BC115026 BC115027 BC137279 BC140789 AF297866 NM_001190481 NM_022111 BC038991 BC018670 BC062215 AK308193	-4935	-	TSC_hg19_v1_chr1_-_36184816 AK096303 NM_152374	-55659	-	TSC_hg19_v1_chr1_-_36184424 BC026909 AK294352	-56038	-	TSC_hg19_v1_chr1_+_36273802 AB046787 BC152450 NM_017629	33370	+	TSC_hg19_v1_chr1_+_36348795 AF093097 NM_012199	108353	+	TSC_hg19_v1_chr1_+_36348815 BC063275	108364	+	BC113116|CLSPN|63967|claspin##BC115023|CLSPN|63967|claspin##BC115024|CLSPN|63967|claspin##BC115025|CLSPN|63967|claspin##BC115026|CLSPN|63967|claspin##BC115027|CLSPN|63967|claspin##BC137279|CLSPN|63967|claspin##BC140789|CLSPN|63967|claspin##AF297866|CLSPN|63967|claspin##NM_001190481|CLSPN|63967|claspin##NM_022111|CLSPN|63967|claspin##BC038991|CLSPN|63967|claspin##BC018670|CLSPN|63967|claspin##BC062215|CLSPN|63967|claspin##AK308193|CLSPN|63967|claspin##AK096303|C1orf216|127703|chromosome 1 open reading frame 216##NM_152374|C1orf216|127703|chromosome 1 open reading frame 216##BC026909|C1orf216|127703|chromosome 1 open reading frame 216##AK294352|C1orf216|127703|chromosome 1 open reading frame 216##AB046787|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4##BC152450|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4##NM_017629|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4##AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1##NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1##BC063275|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1	0.0	
chr17	18935809	18935920	reg1010802.p3	9.598	+	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-27785	-	AK057946 NM_001042450 NM_152351 AK298345 BC062617 BC034380	-80360	+	NM_001243940 AB007851 BC101670 BC101672 BC143475	-167043	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	14422	-	BC157869 NM_001129778	94917	+	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	204844	+	NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##AK057946|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001042450|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_152351|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##AK298345|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC062617|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC034380|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001243940|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AB007851|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC101670|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC101672|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC143475|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2	0.964394	CTCF.p2:0:0.964
chr7	85183718	85183838	reg1012935.p1	9.598	+	AK309116 TSC_hg19_v1_chr7_-_84816296	-367543	-	NM_152754	-432532	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-1359456	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	1089447	+	AK291406 TSC_hg19_v1_chr7_+_86273870	1090093	+	AK294701 TSC_hg19_v1_chr7_+_86274004 BC022496	1090213	+	AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3##AK291406|GRM3|2913|glutamate receptor, metabotropic 3##AK294701|GRM3|2913|glutamate receptor, metabotropic 3##BC022496|GRM3|2913|glutamate receptor, metabotropic 3	0.999831	CTCF.p2:2:1.000
chr9	114384308	114384425	reg1013511.p1	9.598	+	AK309866 AK298379 AK289597 NM_001146108 NM_001146109	-22249	-	D49387 AK091948 AK309450 TSC_hg19_v1_chr9_-_114361928	-22449	-	TSC_hg19_v1_chr9_-_114361678 BC035228 NM_012212	-22676	-	TSC_hg19_v1_chr9_+_114393648 NM_001015882 NM_004125 AK095452 BC048318 AF447177 BC015391 BT007068 DQ891510 DQ894701	9249	+	TSC_hg19_v1_chr9_+_114423856 NM_001017998 NM_001198664	39496	+	BC107574 TSC_hg19_v1_chr9_+_114423894 BC010384 BC016319 U31383 BC072671 BC015206 AB463708 AF493877	39535	+	AK309866|PTGR1|22949|prostaglandin reductase 1##AK298379|PTGR1|22949|prostaglandin reductase 1##AK289597|PTGR1|22949|prostaglandin reductase 1##NM_001146108|PTGR1|22949|prostaglandin reductase 1##NM_001146109|PTGR1|22949|prostaglandin reductase 1##D49387|PTGR1|22949|prostaglandin reductase 1##AK091948|PTGR1|22949|prostaglandin reductase 1##AK309450|PTGR1|22949|prostaglandin reductase 1##BC035228|PTGR1|22949|prostaglandin reductase 1##NM_012212|PTGR1|22949|prostaglandin reductase 1##NM_001015882|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##NM_004125|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##AK095452|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##BC048318|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##AF447177|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##BC015391|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##BT007068|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##DQ891510|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##DQ894701|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##NM_001017998|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##NM_001198664|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC107574|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC010384|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC016319|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##U31383|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC072671|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC015206|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##AF493877|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10	0.527955	CTCF.p2:0:0.528
chr15	91025733	91025856	reg1012329.p2	9.597	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-94255	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-94288	+	TSC_hg19_v1_chr15_+_90931499 AK304337	-94300	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	47402	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	234820	+	NM_002569 X17094	386090	+	BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK304337|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)	0.987256	CTCF.p2:3:0.987
chr22	31316430	31316560	reg1014870.p1	9.597	+	AF323731 NM_030758 AK097581 AK294007 BC118914 AB051451 AB384622 AF288741	-225650	+	BC031973 TSC_hg19_v1_chr22_+_31063955	-252561	+	TSC_hg19_v1_chr22_-_31063837 BC030987 BC028724 AF461689 AK056074 NM_152511	-252660	-	AB020659 NM_014941	47691	-	AK056480 TSC_hg19_v1_chr22_+_31366813	50242	+	TSC_hg19_v1_chr22_+_31477303 NM_006932 NM_134269 NM_134270 AK128719 AF064238 AJ010306 AY061971 AY061972 Y13492 AK096953 AK293681 BC034237 AK300854	160787	+	AF323731|OSBP2|23762|oxysterol binding protein 2##NM_030758|OSBP2|23762|oxysterol binding protein 2##AK097581|OSBP2|23762|oxysterol binding protein 2##AK294007|OSBP2|23762|oxysterol binding protein 2##BC118914|OSBP2|23762|oxysterol binding protein 2##AB051451|OSBP2|23762|oxysterol binding protein 2##AF288741|OSBP2|23762|oxysterol binding protein 2##BC030987|DUSP18|150290|dual specificity phosphatase 18##BC028724|DUSP18|150290|dual specificity phosphatase 18##AF461689|DUSP18|150290|dual specificity phosphatase 18##AK056074|DUSP18|150290|dual specificity phosphatase 18##NM_152511|DUSP18|150290|dual specificity phosphatase 18##AB020659|MORC2|22880|MORC family CW-type zinc finger 2##NM_014941|MORC2|22880|MORC family CW-type zinc finger 2##NM_006932|SMTN|6525|smoothelin##NM_134269|SMTN|6525|smoothelin##NM_134270|SMTN|6525|smoothelin##AK128719|SMTN|6525|smoothelin##AF064238|SMTN|6525|smoothelin##AJ010306|SMTN|6525|smoothelin##AY061971|SMTN|6525|smoothelin##AY061972|SMTN|6525|smoothelin##Y13492|SMTN|6525|smoothelin##AK096953|SMTN|6525|smoothelin##AK293681|SMTN|6525|smoothelin##BC034237|SMTN|6525|smoothelin##AK300854|SMTN|6525|smoothelin	0.916777	CTCF.p2:-11:0.917
chr3	63804344	63804461	reg1013246.p1	9.597	+	NM_001080537 AK126350	-166044	+	NM_144642 AK315958 AK312465	-375603	+	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	-540485	+	TSC_hg19_v1_chr3_-_63849482 CU688000 CR457373 BC065012 AK225110	45070	-	TSC_hg19_v1_chr3_-_63849703 AK027098 AF104914 NM_025075	45254	-	TSC_hg19_v1_chr3_+_63850212 AF032104 AF032105 NM_000333 AJ000517	45806	+	NM_001080537|SNTN|132203|sentan, cilia apical structure protein##AK126350|SNTN|132203|sentan, cilia apical structure protein##NM_144642|SYNPR|132204|synaptoporin##AK315958|SYNPR|132204|synaptoporin##AK312465|SYNPR|132204|synaptoporin##NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin##CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)##BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)##AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)##AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)##AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)##NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)##AF032104|ATXN7|6314|ataxin 7##AF032105|ATXN7|6314|ataxin 7##NM_000333|ATXN7|6314|ataxin 7##AJ000517|ATXN7|6314|ataxin 7	1.026422	CTCF.p2:6:0.999
chr2	9910649	9910746	reg1012235.p1	9.596	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-139572	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	-139648	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	-140084	-	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	72923	+	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	181153	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	273095	+	NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11	0.80356	CTCF.p2:-2:0.804
chr4	157598483	157598622	reg1014679.p1	9.596	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	-723504	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	-773675	+	AB528059 AJ252011 NM_017419	-811152	-	AB590688 BC051876 BC094746 AF260738 AK300480 AF244813 AK313817 BC041783 BC065490 TSC_hg19_v1_chr4_-_157892334 AM922296 AB033831	293665	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	293926	-	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	294007	-	BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##BC051876|PDGFC|56034|platelet derived growth factor C##BC094746|PDGFC|56034|platelet derived growth factor C##AF260738|PDGFC|56034|platelet derived growth factor C##AK300480|PDGFC|56034|platelet derived growth factor C##AF244813|PDGFC|56034|platelet derived growth factor C##AK313817|PDGFC|56034|platelet derived growth factor C##BC041783|PDGFC|56034|platelet derived growth factor C##AM922296|PDGFC|56034|platelet derived growth factor C##AB033831|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C	0.0	
chr7	99942165	99942295	reg1011952.p1	9.596	+	TSC_hg19_v1_chr7_+_99933808 AL834317	-8408	+	TSC_hg19_v1_chr7_+_99933747 AK056412 AK310352	-8475	+	AB103084 TSC_hg19_v1_chr7_-_99933502 BC038996 D38435 D38499 BC110395 BC044214 BC067809	-8689	-	AJ400845 NM_178238 AF161081	13401	+	AF161080 NM_013439 NM_178272 NM_178273 BC017812 TSC_hg19_v1_chr7_+_99971109 AJ400841	28866	+	TSC_hg19_v1_chr7_+_99971132 AJ400842 AJ400843 AK298731 AB590724 CU676074	28975	+	AL834317|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AK056412|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AK310352|PILRB|29990|paired immunoglobin-like type 2 receptor beta##BC038996|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38435|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38499|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC110395|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC044214|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC067809|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##AJ400845|PILRB|29990|paired immunoglobin-like type 2 receptor beta##NM_178238|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AF161081|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AF161080|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_013439|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178272|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178273|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##BC017812|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400841|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400842|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400843|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AK298731|PILRA|29992|paired immunoglobin-like type 2 receptor alpha	0.494234	CTCF.p2:-13:0.432
chr10	95271169	95271302	reg1013641.p1	9.594	+	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	-14847	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	-29187	-	AK075374 NM_000783 AF005418	-437579	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	55274	+	X00129 TSC_hg19_v1_chr10_-_95360993 BC020633 NM_006744	89743	-	NM_006204 U31973 BC111377	101172	+	NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1##X00129|RBP4|5950|retinol binding protein 4, plasma##BC020633|RBP4|5950|retinol binding protein 4, plasma##NM_006744|RBP4|5950|retinol binding protein 4, plasma##NM_006204|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##U31973|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##BC111377|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime	0.508849	CTCF.p2:30:0.509
chr2	38209363	38209515	reg1014096.p1	9.594	+	NM_001170793 NM_144713 AK057516 AF435956	-31839	+	BC024243 NM_001170792	-53538	+	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	-57007	+	U03688 BC012049 TSC_hg19_v1_chr2_-_38303294 AK297039 AK303862	93843	-	TSC_hg19_v1_chr2_-_38303315 AK312686 NM_000104	93881	-	AK316179 TSC_hg19_v1_chr2_-_38525609	316130	-	NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1##BC024243|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1##U03688|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##BC012049|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK303862|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK312686|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_000104|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK316179|ATL2|64225|atlastin GTPase 2	0.983053	CTCF.p2:-10:0.983
chr8	10696499	10696632	reg1014782.p1	9.594	+	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	-108581	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	-166406	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	-183925	-	AY238941 AY523566 BC093762 BC143382 NM_017884 TSC_hg19_v1_chr8_-_10697379 AY029161 AK313715 BC015479 AK296724	769	-	TSC_hg19_v1_chr8_-_10697386 AF205718 AF418553 AJ344104	844	-	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	362300	-	AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##AY238941|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY523566|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC093762|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC143382|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##NM_017884|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AK313715|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC015479|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF205718|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF418553|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ344104|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6	0.997382	CTCF.p2:2:0.997
chr4	129596459	129596597	reg1011822.p2	9.592	+	AK131272 NM_006320	-386545	-	TSC_hg19_v1_chr4_-_129208969 BC092478	-387537	-	AK091741 AX747155 TSC_hg19_v1_chr4_-_129208964 BC016692	-387564	-	TSC_hg19_v1_chr4_+_129730875 NM_024900 NM_199320 AK027620 AF520952 AK304815 AK127326	134342	+	TSC_hg19_v1_chr4_+_129732427 BC032376	135925	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	418062	-	AK131272|PGRMC2|10424|progesterone receptor membrane component 2##NM_006320|PGRMC2|10424|progesterone receptor membrane component 2##BC092478|PGRMC2|10424|progesterone receptor membrane component 2##AK091741|PGRMC2|10424|progesterone receptor membrane component 2##BC016692|PGRMC2|10424|progesterone receptor membrane component 2##NM_024900|PHF17|79960|PHD finger protein 17##NM_199320|PHF17|79960|PHD finger protein 17##AK027620|PHF17|79960|PHD finger protein 17##AF520952|PHF17|79960|PHD finger protein 17##AK304815|PHF17|79960|PHD finger protein 17##AK127326|PHF17|79960|PHD finger protein 17##BC032376|PHF17|79960|PHD finger protein 17##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1	0.0	
chr4	186017315	186017439	reg1013451.p1	9.592	+	BC140795 BC144567 BC144568 BC144569 NM_001029887	-77339	+	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	-270143	-	TSC_hg19_v1_chr4_-_185747123 L09229 AK292798	-270276	-	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	47093	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	107767	-	NM_031953	113906	+	BC140795|HELT|391723|helt bHLH transcription factor##BC144567|HELT|391723|helt bHLH transcription factor##BC144569|HELT|391723|helt bHLH transcription factor##NM_001029887|HELT|391723|helt bHLH transcription factor##AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##L09229|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK292798|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430##NM_031953|SNX25|83891|sorting nexin 25	0.996197	CTCF.p2:9:0.996
chrX	26936857	26936965	reg1013653.p1	9.592	+	AK097561 BC067286 NM_173523	-726355	+	NM_173699 BC029525 AK057361	-780425	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-1902838	-	BC157859 NM_001136533	828014	+	AK057527 NM_182506 BC101307 BC101309 BC101310	889204	+	AK128123 NM_001017930	1062654	-	AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##NM_139058|ARX|170302|aristaless related homeobox##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	0.908989	CTCF.p2:0:0.882
chr11	43873725	43873837	reg1012437.p2	9.591	+	NM_016142 TSC_hg19_v1_chr11_+_43702287 AK027882 AK075011 AK292625 AK075216 AK074952 AF078850 BC012043 AK222881 AK301663 BC012536 EU176708	-171523	+	TSC_hg19_v1_chr11_+_43665785 AK095484	-207997	+	TSC_hg19_v1_chr11_+_43380492 AK001752 BC017238 BC033000	-493289	+	TSC_hg19_v1_chr11_+_43902380 NM_139178 AK315266 AB042029 BC067257	28612	+	TSC_hg19_v1_chr11_+_43964186 NM_001145033 BC052560	90228	+	AB231734 NM_001031854 BC144554	195766	+	NM_016142|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK027882|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075011|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK292625|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075216|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK074952|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AF078850|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012043|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK222881|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK301663|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012536|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##EU176708|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK001752|TTC17|55761|tetratricopeptide repeat domain 17##BC017238|TTC17|55761|tetratricopeptide repeat domain 17##BC033000|TTC17|55761|tetratricopeptide repeat domain 17##NM_139178|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AK315266|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AB042029|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##BC067257|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##NM_001145033|C11orf96|387763|chromosome 11 open reading frame 96##BC052560|C11orf96|387763|chromosome 11 open reading frame 96##AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	0.386209	CTCF.p2:6:0.386
chr6	49377787	49377892	reg1013035.p1	9.591	+	TSC_hg19_v1_chr6_-_48078931 AK300335	-1298914	-	BC136779 AK123835 AK299301 NM_001013732 NM_207499	-1341435	-	BC126194 BC126198 NM_181744 AY377391 AY288419 HQ258199	-1628051	+	M65131 BC016282 TSC_hg19_v1_chr6_-_49430938 BX647789 AK312611 AK292568 NM_000255	53106	-	AK293016 NM_018132 BC016279 TSC_hg19_v1_chr6_+_49431119	53265	+	AK126371 NM_001010904	89831	+	AK300335|C6orf138|442213|chromosome 6 open reading frame 138##BC136779|C6orf138|442213|chromosome 6 open reading frame 138##AK123835|C6orf138|442213|chromosome 6 open reading frame 138##AK299301|C6orf138|442213|chromosome 6 open reading frame 138##NM_001013732|C6orf138|442213|chromosome 6 open reading frame 138##NM_207499|C6orf138|442213|chromosome 6 open reading frame 138##BC126194|OPN5|221391|opsin 5##BC126198|OPN5|221391|opsin 5##NM_181744|OPN5|221391|opsin 5##AY377391|OPN5|221391|opsin 5##AY288419|OPN5|221391|opsin 5##HQ258199|OPN5|221391|opsin 5##M65131|MUT|4594|methylmalonyl CoA mutase##BC016282|MUT|4594|methylmalonyl CoA mutase##BX647789|MUT|4594|methylmalonyl CoA mutase##AK312611|MUT|4594|methylmalonyl CoA mutase##AK292568|MUT|4594|methylmalonyl CoA mutase##NM_000255|MUT|4594|methylmalonyl CoA mutase##AK293016|CENPQ|55166|centromere protein Q##NM_018132|CENPQ|55166|centromere protein Q##BC016279|CENPQ|55166|centromere protein Q##NM_001010904|GLYATL3|389396|glycine-N-acyltransferase-like 3	0.938242	CTCF.p2:-7:0.938
chr6	133144227	133144356	reg1012827.p1	9.590	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	-8572	+	TSC_hg19_v1_chr6_+_133135707 AK096147 NM_001016 D28378 X53505	-8584	+	AK124442 BC069570 AK293853 TSC_hg19_v1_chr6_-_133119740 NM_052831 AK289918	-24590	-	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	418200	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	418241	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	1065963	+	AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##AK096147|SNORA33|594839|small nucleolar RNA, H/ACA box 33##NM_001016|RPS12|6206|ribosomal protein S12##D28378|RPS12|6206|ribosomal protein S12##X53505|RPS12|6206|ribosomal protein S12##AK124442|C6orf192|116843|chromosome 6 open reading frame 192##BC069570|C6orf192|116843|chromosome 6 open reading frame 192##AK293853|C6orf192|116843|chromosome 6 open reading frame 192##NM_052831|C6orf192|116843|chromosome 6 open reading frame 192##AK289918|C6orf192|116843|chromosome 6 open reading frame 192##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21	0.999837	CTCF.p2:1:1.000
chr7	65086631	65086758	reg1015251.p1	9.590	+	TSC_hg19_v1_chr7_+_64838793 AK091618 AX747097 BC036439 M61872	-247887	+	TSC_hg19_v1_chr7_+_64838761 BX647875 NM_007139 NM_152626 BC040594	-247944	+	TSC_hg19_v1_chr7_+_64601445 AK057766	-485174	+	TSC_hg19_v1_chr7_-_65215912 BX647963	129224	-	TSC_hg19_v1_chr7_+_65216060 BC052238 BC073761 BC122874 BC119782	129389	+	TSC_hg19_v1_chr7_-_65235746 BC066990	149051	-	AK091618|ZNF92|168374|zinc finger protein 92##BC036439|ZNF92|168374|zinc finger protein 92##M61872|ZNF92|168374|zinc finger protein 92##BX647875|ZNF92|168374|zinc finger protein 92##NM_007139|ZNF92|168374|zinc finger protein 92##NM_152626|ZNF92|168374|zinc finger protein 92##BC040594|ZNF92|168374|zinc finger protein 92##AK057766|INTS4L1|285905|integrator complex subunit 4-like 1##BC052238|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC073761|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC122874|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC119782|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC066990|LOC441242|441242|uncharacterized LOC441242	0.999924	CTCF.p2:-3:1.000
chr13	92027521	92027643	reg1012910.p1	9.589	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3702713	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5654143	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7571082	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	23322	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1851845	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3104244	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.842106	CTCF.p2:-4:0.842
chr9	46940956	46941082	reg1014387.p1	9.589	+	TSC_hg19_v1_chr9_+_45441926 BC006438	-1499093	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-3256176	+	NM_001145196	-3310290	-	BC040528 NM_001113541 NM_015667	18568590	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	19516282	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	19517477	-	BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.415484	CTCF.p2:9:0.415
chr3	40369243	40369373	reg1014446.p1	9.588	+	TSC_hg19_v1_chr3_+_40351259 AK311922 AF064607 CR542223	-17967	+	TSC_hg19_v1_chr3_+_40351197 AF263452	-18102	+	NM_005875 TSC_hg19_v1_chr3_+_40351187 AK223448 BC006996 AF077052	-18128	+	NM_001248 AF034840 AF039917 AK313322	59403	+	TSC_hg19_v1_chr3_-_40494669 BC047546	125421	-	BC040602 TSC_hg19_v1_chr3_-_40498743	129423	-	AK311922|EIF1B|10289|eukaryotic translation initiation factor 1B##AF064607|EIF1B|10289|eukaryotic translation initiation factor 1B##CR542223|EIF1B|10289|eukaryotic translation initiation factor 1B##AF263452|EIF1B|10289|eukaryotic translation initiation factor 1B##NM_005875|EIF1B|10289|eukaryotic translation initiation factor 1B##AK223448|EIF1B|10289|eukaryotic translation initiation factor 1B##BC006996|EIF1B|10289|eukaryotic translation initiation factor 1B##AF077052|EIF1B|10289|eukaryotic translation initiation factor 1B##NM_001248|ENTPD3|956|ectonucleoside triphosphate diphosphohydrolase 3##AF034840|ENTPD3|956|ectonucleoside triphosphate diphosphohydrolase 3##AF039917|ENTPD3|956|ectonucleoside triphosphate diphosphohydrolase 3##AK313322|ENTPD3|956|ectonucleoside triphosphate diphosphohydrolase 3##BC047546|ENTPD3-AS1|285266|ENTPD3 antisense RNA 1 (non-protein coding)	0.454121	CTCF.p2:-13:0.454
chr5	96566872	96567000	reg1015217.p1	9.588	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-47949	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-47994	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	-48028	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	1538105	+	BC054860 BC117134 NM_001270 AF006513	1695292	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	3304137	+	NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A	0.973467	CTCF.p2:0:0.973
chr11	117692843	117692980	reg1013795.p1	9.587	+	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	-24952	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	-25058	-	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-494080	+	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	2523	-	BT006721 BC005302 NM_021603	5855	-	AL136699 TSC_hg19_v1_chr11_-_117747374 AY358976 BC018652 BC093040 AK311736 AL832811 AK290757	54478	-	AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2##BT006721|FXYD2|486|FXYD domain containing ion transport regulator 2##BC005302|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_021603|FXYD2|486|FXYD domain containing ion transport regulator 2##AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6##AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6	0.061247	
chr14	83538361	83538492	reg1016050.p1	9.587	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-1538199	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-1538278	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-1673600	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	2458047	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	2458115	+	TSC_hg19_v1_chr14_+_85999692 AK297248	2461159	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.948083	CTCF.p2:7:0.948
chr2	232428219	232428312	reg1012925.p1	9.587	+	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	-33111	-	BC033054 TSC_hg19_v1_chr2_-_232379076	-49183	-	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	-99030	-	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	29352	+	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	144969	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	145067	+	AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin##NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha	0.0	
chr9	108480874	108480975	reg1011563.p2	9.586	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-24006	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	-24071	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	-56167	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	1144440	+	TSC_hg19_v1_chr9_+_109686439 CR749850	1205545	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	1564608	+	AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##CR749850|ZNF462|58499|zinc finger protein 462##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.996766	CTCF.p2:8:0.997
chr16	53056463	53056574	reg1012502.p2	9.585	+	AK299202 NM_001146188	-474805	-	NM_001080430	-475713	-	NM_001242473	-948672	-	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	32363	+	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	76581	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	108542	+	AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##NM_001242473|LOC388276|388276|hCG2045437##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9	0.828667	CTCF.p2:12:0.829
chr2	155480461	155480577	reg1012597.p2	9.585	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-752075	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-1145268	-	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-1905375	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	74670	+	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	1706171	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	1708644	-	NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	0.850542	CTCF.p2:-4:0.851
chr5	103514924	103515047	reg1012964.p2	9.585	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-616504	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-920528	+	BC024591 NM_015216 AB463068	-1049711	+	AK308672 NM_001962 U26403	3491605	-	TSC_hg19_v1_chr5_-_107717106 AK126722	4202145	-	BC063316 NM_001163315	4202813	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.978524	CTCF.p2:11:0.979
chr18	59249195	59249319	reg1012429.p1	9.584	+	AF217289 BC101047 BC101048 BC101049 NM_031891	-91483	+	AK314130 NM_005912	-1209257	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-1682028	+	AK096495 NM_173557	311046	-	AF109219 TSC_hg19_v1_chr18_-_59854208	604937	-	TSC_hg19_v1_chr18_-_59854227 BC028363	604964	-	AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##BC028363|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	1.048594	CTCF.p2:6:1.000
chr19	49702232	49702364	reg1015056.p1	9.584	+	AK000048 TSC_hg19_v1_chr19_+_49669495	-32848	+	TSC_hg19_v1_chr19_+_49661048 AK074664 AF497623 AK292862 AY297044 AY297045 AY297046 AY046396 AJ575813 BC132727 BC144122 BC144123 AK295820	-41232	+	AK307897 NM_001195227 NM_017636 TSC_hg19_v1_chr19_+_49661029	-41285	+	BC034948 BC039336 NM_014037	126155	-	TSC_hg19_v1_chr19_+_49838662 AK301016	136360	+	TSC_hg19_v1_chr19_+_49838683 NM_001040031 NM_001774 AK301328	136380	+	AK000048|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AF497623|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK292862|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297044|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297045|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297046|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY046396|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AJ575813|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC132727|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144122|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144123|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK295820|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK307897|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_001195227|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_017636|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC034948|SLC6A16|28968|solute carrier family 6, member 16##NM_014037|SLC6A16|28968|solute carrier family 6, member 16##AK301016|CD37|951|CD37 molecule##NM_001040031|CD37|951|CD37 molecule##NM_001774|CD37|951|CD37 molecule##AK301328|CD37|951|CD37 molecule	0.997317	CTCF.p2:12:0.997
chr2	68423393	68423517	reg1013381.p1	9.584	+	TSC_hg19_v1_chr2_+_68384999 BC008304 NM_020143 AK291715 AF349314 AF164799 AK313204 AK223118 L48692 AK225641 BC018152	-38358	+	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	-38821	-	NM_001190263 NM_001190265 NM_006333 NM_173177 TSC_hg19_v1_chr2_-_68290160	-133295	-	TSC_hg19_v1_chr2_-_68479665 AK307136 AK314893 BC027913 NM_000945	56140	-	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	123645	-	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	168917	+	BC008304|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_020143|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK291715|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF349314|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF164799|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK313204|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK223118|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK225641|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##BC018152|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92##NM_001190263|C1D|10438|C1D nuclear receptor corepressor##NM_001190265|C1D|10438|C1D nuclear receptor corepressor##NM_006333|C1D|10438|C1D nuclear receptor corepressor##NM_173177|C1D|10438|C1D nuclear receptor corepressor##AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin	0.987711	CTCF.p2:-2:0.988
chr5	146603912	146604029	reg1012825.p1	9.583	+	AK294659 NM_181677 NM_181678 AK295347	-142948	-	BC031790 NM_181674 NM_181676	-168326	-	AK314810 M64930 NM_004576 AK056192 NM_181675 AK289717 BX647887 NM_001127381	-345671	-	AK094580 NM_001112724 NM_145001 TSC_hg19_v1_chr5_+_146614587 AK315942 BC021666 AK299099	10636	+	CU691634 AB384367 EU832180 EU832273 TSC_hg19_v1_chr5_-_146833229 BC039006 D78014 AK297223 NM_001387 Y07818	229295	-	EU007906 CU687310 EU832163 EU832257 TSC_hg19_v1_chr5_-_146889506	285496	-	AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK314810|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##M64930|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_004576|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK056192|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181675|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK289717|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BX647887|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_001127381|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK094580|STK32A|202374|serine/threonine kinase 32A##NM_001112724|STK32A|202374|serine/threonine kinase 32A##NM_145001|STK32A|202374|serine/threonine kinase 32A##AK315942|STK32A|202374|serine/threonine kinase 32A##BC021666|STK32A|202374|serine/threonine kinase 32A##AK299099|STK32A|202374|serine/threonine kinase 32A##EU832180|DPYSL3|1809|dihydropyrimidinase-like 3##EU832273|DPYSL3|1809|dihydropyrimidinase-like 3##BC039006|DPYSL3|1809|dihydropyrimidinase-like 3##D78014|DPYSL3|1809|dihydropyrimidinase-like 3##AK297223|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3##Y07818|DPYSL3|1809|dihydropyrimidinase-like 3##EU007906|DPYSL3|1809|dihydropyrimidinase-like 3##EU832163|DPYSL3|1809|dihydropyrimidinase-like 3##EU832257|DPYSL3|1809|dihydropyrimidinase-like 3	0.33712	CTCF.p2:-15:0.337
chr6	93354172	93354292	reg1011992.p1	9.583	+	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-2057394	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-2057549	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-2347620	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	774951	-	TSC_hg19_v1_chr6_-_96025325 BC047582	2671057	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	2671169	+	BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha	0.978139	CTCF.p2:5:0.978
chr13	63086425	63086558	reg1014302.p1	9.582	+	AK289924 NM_022843	-1096837	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-1097238	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-2115012	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	4718013	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	7596050	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	9353768	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.995967	CTCF.p2:-3:0.996
chr3	130752455	130752593	reg1015392.p1	9.582	+	AK297300 NM_001146003 NM_024800 NM_145910 AK123021 AL833472 AB071996 AB071997 BC026195 AK293261 AK316352	-6789	+	AK301388 BC069265 AK027806 NM_014065 AK294156	-6884	-	TSC_hg19_v1_chr3_+_130612841 AB037768 NM_001199179 NM_001001485 NM_001199183 NM_001199184 AF189723 AF225981 AK304175 BC028139 NM_001199185 NM_014382 AF181120 AF181121 AK314342 NM_001001486 NM_001001487 AY268374 AY268375	-139379	+	TSC_hg19_v1_chr3_+_131080714 AK297126	328174	+	TSC_hg19_v1_chr3_+_131080737 AK000532 BC015593	328219	+	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	348127	+	AK297300|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##NM_001146003|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##NM_024800|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##NM_145910|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK123021|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AL833472|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AB071996|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AB071997|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##BC026195|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK293261|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK316352|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK301388|ASTE1|28990|asteroid homolog 1 (Drosophila)##BC069265|ASTE1|28990|asteroid homolog 1 (Drosophila)##AK027806|ASTE1|28990|asteroid homolog 1 (Drosophila)##NM_014065|ASTE1|28990|asteroid homolog 1 (Drosophila)##AK294156|ASTE1|28990|asteroid homolog 1 (Drosophila)##AB037768|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199179|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001485|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199183|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199184|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF189723|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF225981|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK304175|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##BC028139|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199185|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_014382|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181120|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181121|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK314342|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001486|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001487|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268374|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268375|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK297126|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##AK000532|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##BC015593|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16	0.640567	CTCF.p2:-13:0.641
chr9	36995961	36996085	reg1012240.p1	9.582	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-423099	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-594848	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-595126	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	38393	-	TSC_hg19_v1_chr9_+_37079908 AK091718	83883	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	83985	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.82036	CTCF.p2:-13:0.820
chr1	12027311	12027468	reg1014117.p1	9.581	+	TSC_hg19_v1_chr1_+_11994779 AK295254 AK294688 AK316285 AK312243 AK299150 M98252 BC016657 AB385110	-32584	+	TSC_hg19_v1_chr1_+_11994717 NM_000302	-32667	+	TSC_hg19_v1_chr1_-_11986485 BC035033 AB095933 NM_138346	-40916	-	NM_001127660 NM_014874 AK289828 TSC_hg19_v1_chr1_+_12040394 AF036536 AK021947 D86987	12944	+	TSC_hg19_v1_chr1_+_12040500 AK295890	13100	+	TSC_hg19_v1_chr1_+_12040505 BC017061	13123	+	AK295254|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK294688|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK316285|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK312243|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK299150|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##M98252|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##BC016657|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##NM_000302|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##BC035033|KIAA2013|90231|KIAA2013##AB095933|KIAA2013|90231|KIAA2013##NM_138346|KIAA2013|90231|KIAA2013##NM_001127660|MFN2|9927|mitofusin 2##NM_014874|MFN2|9927|mitofusin 2##AK289828|MFN2|9927|mitofusin 2##AF036536|MFN2|9927|mitofusin 2##AK021947|MFN2|9927|mitofusin 2##D86987|MFN2|9927|mitofusin 2##AK295890|MFN2|9927|mitofusin 2##BC017061|MFN2|9927|mitofusin 2	0.486086	CTCF.p2:62:0.269
chr2	169777196	169777343	reg1013109.p1	9.581	+	BC104778 BC113376 NM_001081686 NM_021176 CR627438 HQ258182	-19474	+	TSC_hg19_v1_chr2_-_169746945 AF225416 BC022255 NM_020675 AK291093	-30328	-	NM_001039724 NM_001171632 BC014189 NM_052946 AK002203 AK290254 BC093072 AJ532842 DQ402497	-118142	+	AF091582 NM_003742	110563	-	AF529286 NM_005771	144029	+	TSC_hg19_v1_chr2_+_169923533 AY017349 NM_199204 AK296625 BC051797 AK313220	146356	+	BC104778|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##BC113376|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##NM_001081686|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##NM_021176|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##CR627438|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##HQ258182|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_001039724|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171632|NOSTRIN|115677|nitric oxide synthase trafficker##BC014189|NOSTRIN|115677|nitric oxide synthase trafficker##NM_052946|NOSTRIN|115677|nitric oxide synthase trafficker##AK002203|NOSTRIN|115677|nitric oxide synthase trafficker##AK290254|NOSTRIN|115677|nitric oxide synthase trafficker##BC093072|NOSTRIN|115677|nitric oxide synthase trafficker##AJ532842|NOSTRIN|115677|nitric oxide synthase trafficker##DQ402497|NOSTRIN|115677|nitric oxide synthase trafficker##AF091582|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11##NM_003742|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11##AF529286|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##NM_005771|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AY017349|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##NM_199204|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AK296625|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##BC051797|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AK313220|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	0.834106	CTCF.p2:16:0.834
chr10	106685147	106685253	reg1011837.p2	9.580	+	BC117417 TSC_hg19_v1_chr10_+_106401047	-284155	+	AB028982 NM_014978	-284342	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-571659	+	TSC_hg19_v1_chr10_-_108459000 AK123752	1773859	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	2239176	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	4998009	-	BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.972181	CTCF.p2:-7:0.972
chr15	75194032	75194181	reg1015347.p1	9.580	+	TSC_hg19_v1_chr15_+_75182388 AK294030 AK301370 AK302354 BX648475 AF504648 AK225149 BC046357 AK292374 BC017351 NM_002435 X76057 CU692334 AB529030	-11714	+	CR456800 AF005038 TSC_hg19_v1_chr15_-_75165693 AK315516 BC001376 BC004385 NM_005697 AK096794 AK096376 AK291884	-28451	-	TSC_hg19_v1_chr15_-_75135524 BC157884 NM_001099436 AL117482	-58501	-	AK025373 TSC_hg19_v1_chr15_-_75194610	470	-	TSC_hg19_v1_chr15_-_75199158 AK308954 BC006348 AK000005 BC064575 BC015637 AK291020 AK296403 AK001572	4925	-	NM_020447	5355	-	AK294030|MPI|4351|mannose phosphate isomerase##AK301370|MPI|4351|mannose phosphate isomerase##AK302354|MPI|4351|mannose phosphate isomerase##BX648475|MPI|4351|mannose phosphate isomerase##AF504648|MPI|4351|mannose phosphate isomerase##AK225149|MPI|4351|mannose phosphate isomerase##BC046357|MPI|4351|mannose phosphate isomerase##AK292374|MPI|4351|mannose phosphate isomerase##BC017351|MPI|4351|mannose phosphate isomerase##NM_002435|MPI|4351|mannose phosphate isomerase##X76057|MPI|4351|mannose phosphate isomerase##CR456800|SCAMP2|10066|secretory carrier membrane protein 2##AF005038|SCAMP2|10066|secretory carrier membrane protein 2##AK315516|SCAMP2|10066|secretory carrier membrane protein 2##BC001376|SCAMP2|10066|secretory carrier membrane protein 2##BC004385|SCAMP2|10066|secretory carrier membrane protein 2##NM_005697|SCAMP2|10066|secretory carrier membrane protein 2##AK096794|SCAMP2|10066|secretory carrier membrane protein 2##AK096376|SCAMP2|10066|secretory carrier membrane protein 2##AK291884|SCAMP2|10066|secretory carrier membrane protein 2##BC157884|ULK3|25989|unc-51-like kinase 3 (C. elegans)##NM_001099436|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AL117482|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK025373|C15orf17|57184|chromosome 15 open reading frame 17##AK308954|C15orf17|57184|chromosome 15 open reading frame 17##BC006348|C15orf17|57184|chromosome 15 open reading frame 17##AK000005|C15orf17|57184|chromosome 15 open reading frame 17##BC064575|C15orf17|57184|chromosome 15 open reading frame 17##BC015637|C15orf17|57184|chromosome 15 open reading frame 17##AK291020|C15orf17|57184|chromosome 15 open reading frame 17##AK296403|C15orf17|57184|chromosome 15 open reading frame 17##AK001572|C15orf17|57184|chromosome 15 open reading frame 17##NM_020447|C15orf17|57184|chromosome 15 open reading frame 17	0.997076	CTCF.p2:1:0.997
chr20	30222167	30222282	reg1012645.p1	9.580	+	TSC_hg19_v1_chr20_+_30193091 NM_002165 NM_181353 AK313786 BC012420 BC000613 S78986 X77956 AK291152 D13889 D13890 S78825 AB463776 CU680316 DQ891293 DQ893342 DQ894477 DQ896657 EU176458 EU176468 EU176808 BT007443	-29088	+	TSC_hg19_v1_chr20_+_30135200 BC053868	-86990	+	TSC_hg19_v1_chr20_+_30102316 AJ420895 DQ896206 CU687568 AF515663	-119891	+	AF257180 NM_032609 BC057779	3478	+	BC032024 TSC_hg19_v1_chr20_-_30288101	65873	-	TSC_hg19_v1_chr20_-_30310672 AY263336 BC019307 NM_001191 NM_138578 AK290968 AY263335 CR936637	88442	-	NM_002165|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##NM_181353|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK313786|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC012420|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC000613|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78986|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##X77956|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK291152|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13889|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13890|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78825|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ891293|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ893342|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ894477|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ896657|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176458|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176468|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176808|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BT007443|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AJ420895|HM13|81502|histocompatibility (minor) 13##DQ896206|HM13|81502|histocompatibility (minor) 13##AF515663|HM13|81502|histocompatibility (minor) 13##AF257180|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_032609|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##BC057779|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##AY263336|BCL2L1|598|BCL2-like 1##BC019307|BCL2L1|598|BCL2-like 1##NM_001191|BCL2L1|598|BCL2-like 1##NM_138578|BCL2L1|598|BCL2-like 1##AK290968|BCL2L1|598|BCL2-like 1##AY263335|BCL2L1|598|BCL2-like 1##CR936637|BCL2L1|598|BCL2-like 1	0.999807	CTCF.p2:5:1.000
chr2	159602247	159602377	reg1012849.p1	9.580	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-288729	+	TSC_hg19_v1_chr2_+_159313419 BC034473	-288877	+	CU677295 BC105928 BC107596 BC107597 AK123220 AK058105 AF458588 BC015395 AK309246 TSC_hg19_v1_chr2_-_159313250 AK308783 AK311042 NM_001171637 NM_138803	-289203	-	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	49523	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	222835	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	540836	-	NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##BC034473|PKP4|8502|plakophilin 4##BC105928|CCDC148|130940|coiled-coil domain containing 148##BC107596|CCDC148|130940|coiled-coil domain containing 148##BC107597|CCDC148|130940|coiled-coil domain containing 148##AK123220|CCDC148|130940|coiled-coil domain containing 148##AK058105|CCDC148|130940|coiled-coil domain containing 148##AF458588|CCDC148|130940|coiled-coil domain containing 148##BC015395|CCDC148|130940|coiled-coil domain containing 148##AK309246|CCDC148|130940|coiled-coil domain containing 148##AK308783|CCDC148|130940|coiled-coil domain containing 148##AK311042|CCDC148|130940|coiled-coil domain containing 148##NM_001171637|CCDC148|130940|coiled-coil domain containing 148##NM_138803|CCDC148|130940|coiled-coil domain containing 148##AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1	0.831147	CTCF.p2:14:0.831
chr7	150821255	150821322	reg1023208.p1	9.580	+	TSC_hg19_v1_chr7_+_150811722 BC044644 EU831441 EU831533	-9501	+	TSC_hg19_v1_chr7_+_150783865 AF359283 NM_001042535 NM_031946 BC069236 AF413079 AB209781	-37369	+	TSC_hg19_v1_chr7_+_150782953 AK055393	-38347	+	NM_001098834	43578	-	AF417920 NM_001142459 NM_001142460	63189	-	AK125565 NM_080871	63630	-	BC044644|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##EU831441|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##EU831533|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AF359283|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##NM_001042535|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##NM_031946|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##BC069236|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AF413079|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AB209781|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AK055393|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##NM_001098834|GBX1|2636|gastrulation brain homeobox 1##AF417920|ASB10|136371|ankyrin repeat and SOCS box containing 10##NM_001142459|ASB10|136371|ankyrin repeat and SOCS box containing 10##NM_001142460|ASB10|136371|ankyrin repeat and SOCS box containing 10##AK125565|ASB10|136371|ankyrin repeat and SOCS box containing 10##NM_080871|ASB10|136371|ankyrin repeat and SOCS box containing 10	0.0	
chr9	103267988	103268086	reg1012487.p1	9.580	+	TSC_hg19_v1_chr9_+_103235637 BC035056 DQ891732 DQ894909	-32308	+	TSC_hg19_v1_chr9_+_103235495 NM_003692	-32533	+	NM_001198812 AY598327	-63834	+	NM_001018116 AK300099 TSC_hg19_v1_chr9_+_103340380 EU487253 BC090888	72352	+	NM_207299 AK303807 TSC_hg19_v1_chr9_+_103791087	523029	+	AK000307 AK225306 BC029380 NM_017753 TSC_hg19_v1_chr9_+_103947336	679289	+	BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_001198812|C9orf30-TMEFF1|100526694|C9orf30-TMEFF1 readthrough##AY598327|C9orf30|91283|chromosome 9 open reading frame 30##NM_001018116|MURC|347273|muscle-related coiled-coil protein##AK300099|MURC|347273|muscle-related coiled-coil protein##EU487253|MURC|347273|muscle-related coiled-coil protein##BC090888|MURC|347273|muscle-related coiled-coil protein##NM_207299|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK303807|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1	0.480973	CTCF.p2:4:0.481
chr10	116218876	116219003	reg1015184.p1	9.579	+	BC024314 NM_001001936 NM_032550	-54425	-	AK123108 BC033212 AK027470 TSC_hg19_v1_chr10_-_116164254 AK294969 AK291712 AF474151	-54697	-	TSC_hg19_v1_chr10_+_115999012 AK122716 NM_198496 AJ536328 AJ616914 BC128588 AY572972 BC143380	-219780	+	CU677968 TSC_hg19_v1_chr10_-_116251632	32668	-	TSC_hg19_v1_chr10_-_116286631 AK298709 BC002448	67663	-	TSC_hg19_v1_chr10_-_116286673 CR749819 NM_006720 AK098277	67740	-	BC024314|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_001001936|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_032550|AFAP1L2|84632|actin filament associated protein 1-like 2##AK123108|AFAP1L2|84632|actin filament associated protein 1-like 2##BC033212|AFAP1L2|84632|actin filament associated protein 1-like 2##AK294969|AFAP1L2|84632|actin filament associated protein 1-like 2##AK291712|AFAP1L2|84632|actin filament associated protein 1-like 2##AF474151|AFAP1L2|84632|actin filament associated protein 1-like 2##AK122716|VWA2|340706|von Willebrand factor A domain containing 2##NM_198496|VWA2|340706|von Willebrand factor A domain containing 2##AJ536328|VWA2|340706|von Willebrand factor A domain containing 2##AJ616914|VWA2|340706|von Willebrand factor A domain containing 2##BC128588|VWA2|340706|von Willebrand factor A domain containing 2##AY572972|VWA2|340706|von Willebrand factor A domain containing 2##BC143380|VWA2|340706|von Willebrand factor A domain containing 2##AK298709|ABLIM1|3983|actin binding LIM protein 1##BC002448|ABLIM1|3983|actin binding LIM protein 1##CR749819|ABLIM1|3983|actin binding LIM protein 1##NM_006720|ABLIM1|3983|actin binding LIM protein 1##AK098277|ABLIM1|3983|actin binding LIM protein 1	0.0	
chr14	25602156	25602259	reg1012582.p2	9.578	+	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	-82969	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-498789	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-523346	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1464781	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	3634021	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	3634706	+	BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1	0.585829	CTCF.p2:4:0.586
chr1	48192038	48192173	reg1013724.p1	9.577	+	AF042832 NM_004474	-290417	+	AF275722 NM_012186	-310362	+	TSC_hg19_v1_chr1_+_47799646 AF259961	-392464	+	NM_001194986	270456	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	496287	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	745573	-	AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##NM_001194986|LOC388630|388630|UPF0632 protein A##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6	0.999439	CTCF.p2:11:0.999
chr3	184521175	184521303	reg1014438.p1	9.577	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	-91476	-	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	-241657	+	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	-423199	+	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	8684	+	TSC_hg19_v1_chr3_+_184529983 BC140768	8756	+	TSC_hg19_v1_chr3_-_184870632 BC137178 BC137179 BC150565	349414	-	AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3##AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BC140768|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BC137178|C3orf70|285382|chromosome 3 open reading frame 70##BC137179|C3orf70|285382|chromosome 3 open reading frame 70##BC150565|C3orf70|285382|chromosome 3 open reading frame 70	1.949387	CTCF.p2:-17:0.999	CTCF.p2:29:0.951
chr17	6339435	6339554	reg1013688.p1	9.576	+	DQ892260 DQ895462 AB593054 BC007994 BC012055 AF038437 AB593047 AB593042 AB593043 AB593050 AB593052 AK314558 AB593051 AK023970 AB593048 BX537907 AB593044 AB593045 AB593046 AB593049 AJ633677 AJ633678 AJ830742 AJ830743 AB593053 AB593055 BX647279 AF525970 NM_001033054 NM_001033055 NM_014336 DQ426860	-991	-	TSC_hg19_v1_chr17_+_5974408 BC009975	-365077	+	TSC_hg19_v1_chr17_+_5973700 AL833730 NM_015253	-365687	+	TSC_hg19_v1_chr17_+_6347774 NM_001195228 NM_019013 BC005004 AK225613 AK001353 AK225702 BC013966 AK001018	8269	+	TSC_hg19_v1_chr17_-_6459873 BC035799 BC128583 BC128584 AF334586 NM_001165966 NM_031220	120336	-	TSC_hg19_v1_chr17_-_6543982 AB018296 BC017566 AK292876	204504	-	DQ892260|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##DQ895462|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593054|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BC007994|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BC012055|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AF038437|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593047|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593042|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593043|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593050|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593052|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AK314558|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593051|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AK023970|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593048|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BX537907|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593044|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593045|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593046|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593049|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ633677|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ633678|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ830742|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ830743|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593053|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593055|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BX647279|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AF525970|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_001033054|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_001033055|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_014336|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BC009975|WSCD1|23302|WSC domain containing 1##AL833730|WSCD1|23302|WSC domain containing 1##NM_015253|WSCD1|23302|WSC domain containing 1##NM_001195228|FAM64A|54478|family with sequence similarity 64, member A##NM_019013|FAM64A|54478|family with sequence similarity 64, member A##BC005004|FAM64A|54478|family with sequence similarity 64, member A##AK225613|FAM64A|54478|family with sequence similarity 64, member A##AK001353|FAM64A|54478|family with sequence similarity 64, member A##AK225702|FAM64A|54478|family with sequence similarity 64, member A##BC013966|FAM64A|54478|family with sequence similarity 64, member A##AK001018|FAM64A|54478|family with sequence similarity 64, member A##BC035799|PITPNM3|83394|PITPNM family member 3##BC128583|PITPNM3|83394|PITPNM family member 3##BC128584|PITPNM3|83394|PITPNM family member 3##AF334586|PITPNM3|83394|PITPNM family member 3##NM_001165966|PITPNM3|83394|PITPNM family member 3##NM_031220|PITPNM3|83394|PITPNM family member 3##AB018296|KIAA0753|9851|KIAA0753##BC017566|KIAA0753|9851|KIAA0753##AK292876|KIAA0753|9851|KIAA0753	0.227825	CTCF.p2:-3:0.228
chr19	45930980	45931098	reg1013354.p1	9.576	+	TSC_hg19_v1_chr19_-_45927176 NM_001166049 NM_001983	-3864	-	TSC_hg19_v1_chr19_-_45927167 AF433652 AF001925 M13194 M28650	-3882	-	TSC_hg19_v1_chr19_-_45927109 BC008930 AB069681 AK314884	-3929	-	TSC_hg19_v1_chr19_+_45971253 EU178109 EU178110 EU178111 EU178112 EU178113 EU178114 EU178115 EU178116 L49169 NM_001114171 NM_006732 AK097324 AK225070 BC051767 BC036724 BC063042	40230	+	AF004224 TSC_hg19_v1_chr19_-_45996506 NM_206901	65454	-	TSC_hg19_v1_chr19_-_46000271 AF004222 BC014244 BC073874 AK291967 NM_005619 NM_206900	69208	-	NM_001166049|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##NM_001983|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AF433652|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AF001925|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##M13194|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##M28650|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##BC008930|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AB069681|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AK314884|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##EU178109|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178110|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178111|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178112|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178113|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178114|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178115|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178116|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##L49169|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_001114171|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_006732|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##AK225070|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##BC036724|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##BC063042|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##AF004224|RTN2|6253|reticulon 2##NM_206901|RTN2|6253|reticulon 2##AF004222|RTN2|6253|reticulon 2##BC014244|RTN2|6253|reticulon 2##BC073874|RTN2|6253|reticulon 2##AK291967|RTN2|6253|reticulon 2##NM_005619|RTN2|6253|reticulon 2##NM_206900|RTN2|6253|reticulon 2	0.018402	
chr2	183051007	183051128	reg1012115.p1	9.576	+	NM_001080545 AK129898 AF494535 BX647581 BC017943	-200418	+	TSC_hg19_v1_chr2_+_182756689 BC052581 BC064499 BC028706 AK291745 BX647257 AB116937 AB385517 BX647967 AK304238 BX648888	-294274	+	TSC_hg19_v1_chr2_+_182756494 NM_001130445 NM_006751 AK093143 AX747951 AB067514	-294536	+	AK295657 AB384753 DQ892369 DQ893372 DQ895578 DQ896694 AF110237 NM_005019 BC022480 AF110240 AF110236 NM_001003683 U40370 AK294239	336217	-	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	530007	+	TSC_hg19_v1_chr2_+_183582683 BC107425 AF314529 AY089971 HQ258514 HQ258651 AL832646 AK027450	531680	+	NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC052581|SSFA2|6744|sperm specific antigen 2##BC064499|SSFA2|6744|sperm specific antigen 2##BC028706|SSFA2|6744|sperm specific antigen 2##AK291745|SSFA2|6744|sperm specific antigen 2##BX647257|SSFA2|6744|sperm specific antigen 2##AB116937|SSFA2|6744|sperm specific antigen 2##BX647967|SSFA2|6744|sperm specific antigen 2##AK304238|SSFA2|6744|sperm specific antigen 2##BX648888|SSFA2|6744|sperm specific antigen 2##NM_001130445|SSFA2|6744|sperm specific antigen 2##NM_006751|SSFA2|6744|sperm specific antigen 2##AB067514|SSFA2|6744|sperm specific antigen 2##AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC107425|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF314529|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY089971|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258514|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258651|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832646|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027450|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	0.992711	CTCF.p2:1:0.993
chr10	52035552	52035685	reg1013853.p1	9.575	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-27278	-	NM_018232	-197733	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-207896	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	348085	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	464092	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	609775	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.999147	CTCF.p2:3:0.999
chr1	36348620	36348766	reg1014309.p1	9.575	+	TSC_hg19_v1_chr1_+_36273802 AB046787 BC152450 NM_017629	-74873	+	TSC_hg19_v1_chr1_-_36235569 BC113116 BC115023 BC115024 BC115025 BC115026 BC115027 BC137279 BC140789 AF297866 NM_001190481 NM_022111 BC038991 BC018670 BC062215 AK308193	-113178	-	TSC_hg19_v1_chr1_-_36184816 AK096303 NM_152374	-163902	-	TSC_hg19_v1_chr1_+_36348795 AF093097 NM_012199	110	+	TSC_hg19_v1_chr1_+_36348815 BC063275	121	+	TSC_hg19_v1_chr1_+_36348834 AK314148 AB385028	226	+	AB046787|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4##BC152450|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4##NM_017629|EIF2C4|192670|eukaryotic translation initiation factor 2C, 4##BC113116|CLSPN|63967|claspin##BC115023|CLSPN|63967|claspin##BC115024|CLSPN|63967|claspin##BC115025|CLSPN|63967|claspin##BC115026|CLSPN|63967|claspin##BC115027|CLSPN|63967|claspin##BC137279|CLSPN|63967|claspin##BC140789|CLSPN|63967|claspin##AF297866|CLSPN|63967|claspin##NM_001190481|CLSPN|63967|claspin##NM_022111|CLSPN|63967|claspin##BC038991|CLSPN|63967|claspin##BC018670|CLSPN|63967|claspin##BC062215|CLSPN|63967|claspin##AK308193|CLSPN|63967|claspin##AK096303|C1orf216|127703|chromosome 1 open reading frame 216##NM_152374|C1orf216|127703|chromosome 1 open reading frame 216##AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1##NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1##BC063275|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1##AK314148|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1	0.791336	CTCF.p2:-2:0.791
chr15	85198075	85198179	reg1012999.p2	9.574	+	TSC_hg19_v1_chr15_-_85197515 AK225068 NM_032856 BC050648 BC063392	-601	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	-621	-	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	-655	-	M21551 AL110112 BC008603 TSC_hg19_v1_chr15_-_85201431	3319	-	BC007407 BC007431 NM_021077 NM_205858	3670	-	AF090315 AF108945 CR457127 DQ891826 AF087906 AK300693 TSC_hg19_v1_chr15_-_85259371 AK223224 BC000359 AF061737	61219	-	AK225068|WDR73|84942|WD repeat domain 73##NM_032856|WDR73|84942|WD repeat domain 73##BC050648|WDR73|84942|WD repeat domain 73##BC063392|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##M21551|NMB|4828|neuromedin B##AL110112|NMB|4828|neuromedin B##BC008603|NMB|4828|neuromedin B##BC007407|NMB|4828|neuromedin B##BC007431|NMB|4828|neuromedin B##NM_021077|NMB|4828|neuromedin B##NM_205858|NMB|4828|neuromedin B##AF090315|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##AF108945|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##CR457127|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##DQ891826|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##AF087906|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##AK300693|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##AK223224|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##BC000359|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##AF061737|SEC11A|23478|SEC11 homolog A (S. cerevisiae)	0.990302	CTCF.p2:2:0.990
chr17	43210682	43210773	reg1011809.p2	9.574	+	NM_001135704 TSC_hg19_v1_chr17_+_43209980 BC041143	-745	+	AB075844 AL834392 AB384653 TSC_hg19_v1_chr17_-_43209885 BC072384 AK074240 NM_133373	-912	-	TSC_hg19_v1_chr17_+_43138687 BC006538 BC006569 NM_021079 AF043324 AK291936 AK303517 AB527516 BC008579 AF020500	-72035	+	AK316359 NM_001135705 NM_001135706 NM_001135707 NM_024722 BC022000 AK296167 TSC_hg19_v1_chr17_+_43213056 AK023384 AK075104 BC029164 AB073387	2330	+	NM_006460	13956	+	TSC_hg19_v1_chr17_+_43225841 AK023624 AB021179	15124	+	NM_001135704|ACBD4|79777|acyl-CoA binding domain containing 4##BC041143|ACBD4|79777|acyl-CoA binding domain containing 4##AB075844|PLCD3|113026|phospholipase C, delta 3##AL834392|PLCD3|113026|phospholipase C, delta 3##BC072384|PLCD3|113026|phospholipase C, delta 3##AK074240|PLCD3|113026|phospholipase C, delta 3##NM_133373|PLCD3|113026|phospholipase C, delta 3##BC006538|NMT1|4836|N-myristoyltransferase 1##BC006569|NMT1|4836|N-myristoyltransferase 1##NM_021079|NMT1|4836|N-myristoyltransferase 1##AF043324|NMT1|4836|N-myristoyltransferase 1##AK291936|NMT1|4836|N-myristoyltransferase 1##AK303517|NMT1|4836|N-myristoyltransferase 1##BC008579|NMT1|4836|N-myristoyltransferase 1##AF020500|NMT1|4836|N-myristoyltransferase 1##AK316359|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135705|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135706|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135707|ACBD4|79777|acyl-CoA binding domain containing 4##NM_024722|ACBD4|79777|acyl-CoA binding domain containing 4##BC022000|ACBD4|79777|acyl-CoA binding domain containing 4##AK296167|ACBD4|79777|acyl-CoA binding domain containing 4##AK023384|ACBD4|79777|acyl-CoA binding domain containing 4##AK075104|ACBD4|79777|acyl-CoA binding domain containing 4##BC029164|ACBD4|79777|acyl-CoA binding domain containing 4##AB073387|ACBD4|79777|acyl-CoA binding domain containing 4##NM_006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK023624|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AB021179|HEXIM1|10614|hexamethylene bis-acetamide inducible 1	0.184887	
chr11	47281188	47281306	reg1014316.p1	9.573	+	NM_001130101 NM_005693 TSC_hg19_v1_chr11_+_47279546 AK290614 AK313311 AK309027 AK122661 BC008819	-1735	+	TSC_hg19_v1_chr11_+_47270457 NM_001130102 BC041172	-10782	+	DQ892669 DQ895913 BC003160 TSC_hg19_v1_chr11_-_47270357 X12548 AK298122 AK097626 AK300569 AK300931 AK301860 AK308512 BC093010 AK299382 AK300911 AK303894 AK311431 NM_001131064 NM_001610	-10850	-	TSC_hg19_v1_chr11_+_47290926 NM_130470 U77352	9693	+	TSC_hg19_v1_chr11_+_47291234 NM_001135944 NM_003682 NM_130471 NM_130472 NM_130473 NM_130474 AF440100 AF440101 AF440102 AF440103 AF440434 AK292442	9966	+	TSC_hg19_v1_chr11_+_47291683 NM_001135943 NM_130475 NM_130476 BC040484 AB002356 U44953	10471	+	NM_001130101|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##NM_005693|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK290614|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK313311|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK309027|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK122661|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##BC008819|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##NM_001130102|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##BC041172|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##DQ892669|ACP2|53|acid phosphatase 2, lysosomal##DQ895913|ACP2|53|acid phosphatase 2, lysosomal##BC003160|ACP2|53|acid phosphatase 2, lysosomal##X12548|ACP2|53|acid phosphatase 2, lysosomal##AK298122|ACP2|53|acid phosphatase 2, lysosomal##AK300569|ACP2|53|acid phosphatase 2, lysosomal##AK300931|ACP2|53|acid phosphatase 2, lysosomal##AK301860|ACP2|53|acid phosphatase 2, lysosomal##AK308512|ACP2|53|acid phosphatase 2, lysosomal##BC093010|ACP2|53|acid phosphatase 2, lysosomal##AK299382|ACP2|53|acid phosphatase 2, lysosomal##AK300911|ACP2|53|acid phosphatase 2, lysosomal##AK303894|ACP2|53|acid phosphatase 2, lysosomal##AK311431|ACP2|53|acid phosphatase 2, lysosomal##NM_001131064|ACP2|53|acid phosphatase 2, lysosomal##NM_001610|ACP2|53|acid phosphatase 2, lysosomal##NM_130470|MADD|8567|MAP-kinase activating death domain##U77352|MADD|8567|MAP-kinase activating death domain##NM_001135944|MADD|8567|MAP-kinase activating death domain##NM_003682|MADD|8567|MAP-kinase activating death domain##NM_130471|MADD|8567|MAP-kinase activating death domain##NM_130472|MADD|8567|MAP-kinase activating death domain##NM_130473|MADD|8567|MAP-kinase activating death domain##NM_130474|MADD|8567|MAP-kinase activating death domain##AF440100|MADD|8567|MAP-kinase activating death domain##AF440101|MADD|8567|MAP-kinase activating death domain##AF440102|MADD|8567|MAP-kinase activating death domain##AF440103|MADD|8567|MAP-kinase activating death domain##AF440434|MADD|8567|MAP-kinase activating death domain##AK292442|MADD|8567|MAP-kinase activating death domain##NM_001135943|MADD|8567|MAP-kinase activating death domain##NM_130475|MADD|8567|MAP-kinase activating death domain##NM_130476|MADD|8567|MAP-kinase activating death domain##BC040484|MADD|8567|MAP-kinase activating death domain##AB002356|MADD|8567|MAP-kinase activating death domain##U44953|MADD|8567|MAP-kinase activating death domain	0.022694	
chr19	45690891	45691044	reg1012796.p1	9.573	+	NM_212550 AK296695 TSC_hg19_v1_chr19_+_45682022	-8954	+	TSC_hg19_v1_chr19_-_45681496 FJ418644 BC001907 NM_024108 BC004450 AF161407	-9489	-	NM_198478	-27560	-	AK225791 AK093466 AX748143 NM_138568	46500	-	TSC_hg19_v1_chr19_+_45754522 NM_001199867 NM_031417 AB049127 AB088047	63560	+	TSC_hg19_v1_chr19_+_45754571 BC071948 AK075272 AY057448 AB058763 AY120867	63731	+	NM_212550|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3##AK296695|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3##FJ418644|TRAPPC6A|79090|trafficking protein particle complex 6A##BC001907|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_024108|TRAPPC6A|79090|trafficking protein particle complex 6A##BC004450|TRAPPC6A|79090|trafficking protein particle complex 6A##AF161407|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_198478|NKPD1|284353|NTPase, KAP family P-loop domain containing 1##AK225791|EXOC3L2|90332|exocyst complex component 3-like 2##AK093466|EXOC3L2|90332|exocyst complex component 3-like 2##NM_138568|EXOC3L2|90332|exocyst complex component 3-like 2##NM_001199867|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##NM_031417|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AB049127|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AB088047|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##BC071948|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AK075272|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AY057448|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AB058763|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AY120867|MARK4|57787|MAP/microtubule affinity-regulating kinase 4	0.988976	CTCF.p2:3:0.989
chr12	47415127	47415269	reg1014625.p1	9.571	+	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	-195442	-	TSC_hg19_v1_chr12_-_46766619 NM_018976	-648595	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-648909	-	TSC_hg19_v1_chr12_+_47473404 BC072670	58199	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	58385	-	BC008360 NM_138371	194853	+	AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC008360|FAM113B|91523|family with sequence similarity 113, member B##NM_138371|FAM113B|91523|family with sequence similarity 113, member B	0.997036	CTCF.p2:0:0.997
chr6	12504735	12504859	reg1012062.p2	9.571	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	-214204	+	NM_002114	-492074	+	NM_001143948 NM_032744	-725518	-	TSC_hg19_v1_chr6_+_12514301 D28417	9505	+	AK295263 TSC_hg19_v1_chr6_+_12716998	212146	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	212246	+	NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1	0.667657	CTCF.p2:0:0.668
chr11	45392888	45393001	reg1013811.p1	9.570	+	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	-85194	-	AF275818 NM_020229	-277381	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	-420527	-	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	294240	-	NM_001145265 NM_001145266	432678	+	TSC_hg19_v1_chr11_+_45825944 AK225428 AK002182 AK091245	432970	+	AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1##AK225428|SLC35C1|55343|solute carrier family 35, member C1##AK002182|SLC35C1|55343|solute carrier family 35, member C1##AK091245|SLC35C1|55343|solute carrier family 35, member C1	0.97646	CTCF.p2:-6:0.976
chr11	63913647	63913789	reg1015632.p1	9.570	+	AY358308 BC018370 NM_013280	-42418	+	TSC_hg19_v1_chr11_+_63754327 AK307413	-159405	+	BC010368 BC107701 TSC_hg19_v1_chr11_+_63753917 AK303228 AF161381 AK225133 AL096714 AK091830 BC007519 AY177200 CU675687 CU679683	-159798	+	AF086206 BC003188 TSC_hg19_v1_chr11_-_63933439	19603	-	TSC_hg19_v1_chr11_-_63933585 AF202922 BC000270 BC007297 BC008316 NM_014067	19837	-	NM_006819 TSC_hg19_v1_chr11_+_63953613	39887	+	AY358308|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##BC018370|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##NM_013280|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AF086206|MACROD1|28992|MACRO domain containing 1##BC003188|MACROD1|28992|MACRO domain containing 1##AF202922|MACROD1|28992|MACRO domain containing 1##BC000270|MACROD1|28992|MACRO domain containing 1##BC007297|MACROD1|28992|MACRO domain containing 1##BC008316|MACROD1|28992|MACRO domain containing 1##NM_014067|MACROD1|28992|MACRO domain containing 1##NM_006819|STIP1|10963|stress-induced-phosphoprotein 1	0.985477	CTCF.p2:13:0.985
chr18	68599604	68599717	reg1013004.p2	9.570	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-643399	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-643493	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-726722	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	1611115	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	1612070	-	AF448839 NM_138999	1933273	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.987626	CTCF.p2:-4:0.988
chr8	126924283	126924390	reg1013048.p1	9.570	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-481757	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-820239	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-820279	-	TSC_hg19_v1_chr8_-_126963395 BX648371	39077	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	646219	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	646388	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.997767	CTCF.p2:-2:0.998
chr12	128744170	128744291	reg1012728.p1	9.569	+	NM_052907	-2933069	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-3194162	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-3194289	+	NM_001136103	7717	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	564213	-	BC043528 TSC_hg19_v1_chr12_+_129337985	593754	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.731599	CTCF.p2:-11:0.732
chr13	28357363	28357483	reg1014755.p1	9.569	+	AK000623 TSC_hg19_v1_chr13_+_28196032 AB464657 AB527907 CU677257	-161349	+	TSC_hg19_v1_chr13_+_28196028 AF077044 AK097973 AK311833	-161397	+	TSC_hg19_v1_chr13_+_28196018 BC054519	-161403	+	AB044157 NM_145657 AB463700	9378	+	TSC_hg19_v1_chr13_+_28494136 NM_000209 X99894 U30329 U35632 AB464648	136781	+	CU677005 AB463470 DQ893626 EU176674 U51096 TSC_hg19_v1_chr13_-_28543282	185789	-	AK000623|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AF077044|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK097973|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK311833|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##BC054519|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AB044157|GSX1|219409|GS homeobox 1##NM_145657|GSX1|219409|GS homeobox 1##NM_000209|PDX1|3651|pancreatic and duodenal homeobox 1##X99894|PDX1|3651|pancreatic and duodenal homeobox 1##U30329|PDX1|3651|pancreatic and duodenal homeobox 1##U35632|PDX1|3651|pancreatic and duodenal homeobox 1##DQ893626|CDX2|1045|caudal type homeobox 2##EU176674|CDX2|1045|caudal type homeobox 2##U51096|CDX2|1045|caudal type homeobox 2	0.051044	
chr2	74051209	74051326	reg1011772.p1	9.569	+	AK125975 NM_001080474	-39952	+	CU674166 DQ891356 DQ894537 TSC_hg19_v1_chr2_-_74007231 BC000346 AF023917 AK315271 CR627368 NM_003584	-44074	-	TSC_hg19_v1_chr2_-_73964473 AK291071 AF060921 AK097254 AY643713 BC029492 AK295239 AF151879 NM_016058	-86796	-	NM_201647 TSC_hg19_v1_chr2_+_74056093	4801	+	TSC_hg19_v1_chr2_+_74056109 NM_006463 NM_213622 BC065574	4867	+	BC007682 U73522 CU675757 CU688078 DQ892616 DQ895856 EU927390 TSC_hg19_v1_chr2_+_74058055	6745	+	AK125975|C2orf78|388960|chromosome 2 open reading frame 78##NM_001080474|C2orf78|388960|chromosome 2 open reading frame 78##DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AK291071|TPRKB|51002|TP53RK binding protein##AF060921|TPRKB|51002|TP53RK binding protein##AK097254|TPRKB|51002|TP53RK binding protein##AY643713|TPRKB|51002|TP53RK binding protein##BC029492|TPRKB|51002|TP53RK binding protein##AK295239|TPRKB|51002|TP53RK binding protein##AF151879|TPRKB|51002|TP53RK binding protein##NM_016058|TPRKB|51002|TP53RK binding protein##NM_201647|STAMBP|10617|STAM binding protein##NM_006463|STAMBP|10617|STAM binding protein##NM_213622|STAMBP|10617|STAM binding protein##BC065574|STAMBP|10617|STAM binding protein##BC007682|STAMBP|10617|STAM binding protein##U73522|STAMBP|10617|STAM binding protein##DQ892616|STAMBP|10617|STAM binding protein##DQ895856|STAMBP|10617|STAM binding protein##EU927390|STAMBP|10617|STAM binding protein	0.116142	
chr8	138505201	138505305	reg1011559.p1	9.569	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-2035052	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-2035595	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-2779979	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	1003853	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	1420991	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	2210029	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.715773	CTCF.p2:17:0.716
chr18	77915758	77915881	reg1013127.p1	9.568	+	TSC_hg19_v1_chr18_+_77905812 AK056304	-9952	+	AK292566 TSC_hg19_v1_chr18_+_77867161 AB020670	-48651	+	BC071589 NM_014913	-48905	+	AB044556 AB178535 AB178536 AB527962 TSC_hg19_v1_chr18_-_78005398 BC060797 NM_032510	89540	-	None	None	None	None	None	None	AK056304|LOC100130522|100130522|uncharacterized LOC100130522##AK292566|ADNP2|22850|ADNP homeobox 2##AB020670|ADNP2|22850|ADNP homeobox 2##BC071589|ADNP2|22850|ADNP homeobox 2##NM_014913|ADNP2|22850|ADNP homeobox 2##AB044556|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##AB178535|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##AB178536|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##BC060797|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##NM_032510|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	0.996121	CTCF.p2:-5:0.996
chr19	41814525	41814650	reg1014202.p1	9.567	+	BC129981 TSC_hg19_v1_chr19_-_41813133	-1525	-	TSC_hg19_v1_chr19_+_41798338 AL050146	-16315	+	TSC_hg19_v1_chr19_+_41771021 AK297127	-43546	+	TSC_hg19_v1_chr19_+_41816132 BC011577 NM_052848	1497	+	BT007245 CU692504 TSC_hg19_v1_chr19_-_41858962 EU832132 EU832225	44402	-	TSC_hg19_v1_chr19_-_41859306 BC022242 AK291907	44702	-	AL050146|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK297127|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##BC011577|CCDC97|90324|coiled-coil domain containing 97##NM_052848|CCDC97|90324|coiled-coil domain containing 97##BT007245|TGFB1|7040|transforming growth factor, beta 1##EU832132|TGFB1|7040|transforming growth factor, beta 1##EU832225|TGFB1|7040|transforming growth factor, beta 1##BC022242|TGFB1|7040|transforming growth factor, beta 1##AK291907|TGFB1|7040|transforming growth factor, beta 1	0.998554	CTCF.p2:11:0.999
chr11	117052105	117052220	reg1012725.p2	9.566	+	TSC_hg19_v1_chr11_+_117049977 AK303023	-2183	+	TSC_hg19_v1_chr11_+_117049872 AF151799 BC114522 BC114959 AY358442 NM_001040455 AK292974	-2270	+	TSC_hg19_v1_chr11_+_117049458 AK292501	-2605	+	NM_001001522 NM_003186 AK223002 M95787 TSC_hg19_v1_chr11_+_117070088 AK314043 BC010946 BC093050 BC004927 D17409	17917	+	BX640723 TSC_hg19_v1_chr11_+_117075706	23532	+	TSC_hg19_v1_chr11_-_117100552 BT006870 DQ890632 DQ893803	48393	-	AK303023|SIDT2|51092|SID1 transmembrane family, member 2##AF151799|SIDT2|51092|SID1 transmembrane family, member 2##BC114522|SIDT2|51092|SID1 transmembrane family, member 2##BC114959|SIDT2|51092|SID1 transmembrane family, member 2##AY358442|SIDT2|51092|SID1 transmembrane family, member 2##NM_001040455|SIDT2|51092|SID1 transmembrane family, member 2##AK292974|SIDT2|51092|SID1 transmembrane family, member 2##AK292501|SIDT2|51092|SID1 transmembrane family, member 2##NM_001001522|TAGLN|6876|transgelin##NM_003186|TAGLN|6876|transgelin##AK223002|TAGLN|6876|transgelin##M95787|TAGLN|6876|transgelin##AK314043|TAGLN|6876|transgelin##BC010946|TAGLN|6876|transgelin##BC093050|TAGLN|6876|transgelin##BC004927|TAGLN|6876|transgelin##D17409|TAGLN|6876|transgelin##BX640723|TAGLN|6876|transgelin##BT006870|PCSK7|9159|proprotein convertase subtilisin/kexin type 7##DQ890632|PCSK7|9159|proprotein convertase subtilisin/kexin type 7##DQ893803|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	0.571125	CTCF.p2:13:0.466
chr16	23072148	23072281	reg1012282.p1	9.565	+	AB209794 AF105374 AF105375 NM_006043 BC093734 BC093736	-246363	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	-246712	+	NM_001135865 BC036263 AK296338 CU690320	-547232	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	88335	-	U48936 BC059391 NM_001039 TSC_hg19_v1_chr16_+_23194066	121838	+	NM_000336 BC036352 X87159 AK313192	241413	+	AB209794|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105374|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105375|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_006043|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093734|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093736|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_001135865|LOC100132247|100132247|nuclear pore complex interacting protein related gene##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296338|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31##U48936|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##BC059391|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_001039|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_000336|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC036352|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##X87159|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##AK313192|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta	0.967038	CTCF.p2:6:0.967
chr5	72497871	72497987	reg1012434.p1	9.565	+	AK315460 NM_153217 AK055830	-28898	+	TSC_hg19_v1_chr5_+_72416401 NM_001161342 NM_173490 BC018083	-81493	+	TSC_hg19_v1_chr5_+_72251897 AK291782 BC006004 AK295141 BC014311 AL831971 AM393291 AM393840 CU676963	-246028	+	U13222 TSC_hg19_v1_chr5_-_72743884	245930	-	NM_004472 U59832 TSC_hg19_v1_chr5_-_72744463	246480	-	TSC_hg19_v1_chr5_+_72794266 NM_001037637 NM_001207 AK310919 AK225964 AK291125	296330	+	AK315460|TMEM174|134288|transmembrane protein 174##NM_153217|TMEM174|134288|transmembrane protein 174##AK055830|TMEM174|134288|transmembrane protein 174##NM_001161342|TMEM171|134285|transmembrane protein 171##NM_173490|TMEM171|134285|transmembrane protein 171##BC018083|TMEM171|134285|transmembrane protein 171##AK291782|FCHO2|115548|FCH domain only 2##BC006004|FCHO2|115548|FCH domain only 2##AK295141|FCHO2|115548|FCH domain only 2##BC014311|FCHO2|115548|FCH domain only 2##AL831971|FCHO2|115548|FCH domain only 2##AM393291|FCHO2|115548|FCH domain only 2##AM393840|FCHO2|115548|FCH domain only 2##U13222|FOXD1|2297|forkhead box D1##NM_004472|FOXD1|2297|forkhead box D1##U59832|FOXD1|2297|forkhead box D1##NM_001037637|BTF3|689|basic transcription factor 3##NM_001207|BTF3|689|basic transcription factor 3##AK310919|BTF3|689|basic transcription factor 3##AK225964|BTF3|689|basic transcription factor 3##AK291125|BTF3|689|basic transcription factor 3	0.982588	CTCF.p2:11:0.896
chr6	167493379	167493506	reg1010031.p1	9.565	+	TSC_hg19_v1_chr6_+_167412884 NM_007045 NM_194429 Y18046 AK294950 AK289846 BX647686 AK312791 BC011902 AB590215 CU680104 DQ893037 DQ896278 AJ420472	-80589	+	AK315467 TSC_hg19_v1_chr6_-_167370038 BC036282 NM_003730	-123385	-	TSC_hg19_v1_chr6_-_167370030 BC001660 BC001819 BC039713 BC051912 AJ419865 AJ419866 AJ419867 U85625	-123432	-	NM_004367	31852	+	NM_031409 U68031 U68030	42807	+	BC095537 NM_005299	77874	-	NM_007045|FGFR1OP|11116|FGFR1 oncogene partner##NM_194429|FGFR1OP|11116|FGFR1 oncogene partner##Y18046|FGFR1OP|11116|FGFR1 oncogene partner##AK294950|FGFR1OP|11116|FGFR1 oncogene partner##AK289846|FGFR1OP|11116|FGFR1 oncogene partner##AK312791|FGFR1OP|11116|FGFR1 oncogene partner##BC011902|FGFR1OP|11116|FGFR1 oncogene partner##DQ893037|FGFR1OP|11116|FGFR1 oncogene partner##DQ896278|FGFR1OP|11116|FGFR1 oncogene partner##AJ420472|FGFR1OP|11116|FGFR1 oncogene partner##AK315467|RNASET2|8635|ribonuclease T2##BC036282|RNASET2|8635|ribonuclease T2##NM_003730|RNASET2|8635|ribonuclease T2##BC001660|RNASET2|8635|ribonuclease T2##BC001819|RNASET2|8635|ribonuclease T2##BC039713|RNASET2|8635|ribonuclease T2##BC051912|RNASET2|8635|ribonuclease T2##AJ419865|RNASET2|8635|ribonuclease T2##AJ419866|RNASET2|8635|ribonuclease T2##AJ419867|RNASET2|8635|ribonuclease T2##U85625|RNASET2|8635|ribonuclease T2##NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31	0.0	
chr3	42160389	42160514	reg1013984.p1	9.564	+	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	-27618	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	-156892	-	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	-919427	+	TSC_hg19_v1_chr3_+_42190749 AK294221	30297	+	AL713787 TSC_hg19_v1_chr3_+_42190865	30396	+	TSC_hg19_v1_chr3_+_42201684 BX647199 NM_014965 BC015922 AK000754 AM392573 AM393596 CU677507 EU446989	41304	+	AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1##BX647199|TRAK1|22906|trafficking protein, kinesin binding 1##NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1##BC015922|TRAK1|22906|trafficking protein, kinesin binding 1##AK000754|TRAK1|22906|trafficking protein, kinesin binding 1##AM392573|TRAK1|22906|trafficking protein, kinesin binding 1##AM393596|TRAK1|22906|trafficking protein, kinesin binding 1##EU446989|TRAK1|22906|trafficking protein, kinesin binding 1	0.805221	CTCF.p2:-9:0.805
chr4	82327067	82327187	reg1006137.p1	9.563	+	AB528214 D70899 NM_006259 X94612	-200920	-	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	-374985	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-1070230	+	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	65856	-	TSC_hg19_v1_chr4_-_82393062 AK291459 BC036784 AK303625 AK056257 NM_152545	65933	-	D55671 TSC_hg19_v1_chr4_-_83294725	967548	-	D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B##AK291459|RASGEF1B|153020|RasGEF domain family, member 1B##BC036784|RASGEF1B|153020|RasGEF domain family, member 1B##AK303625|RASGEF1B|153020|RasGEF domain family, member 1B##AK056257|RASGEF1B|153020|RasGEF domain family, member 1B##NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B##D55671|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	0.99674	CTCF.p2:-3:0.997
chr8	69306965	69307067	reg1012626.p2	9.563	+	BC041961 NM_001195639 NM_052958	-64060	+	AK294299 TSC_hg19_v1_chr8_+_68864738	-442286	+	TSC_hg19_v1_chr8_+_68864614 AY570973	-442383	+	AK095341 NM_001128204 NM_015170 TSC_hg19_v1_chr8_+_70378858 AF545571	1071849	+	TSC_hg19_v1_chr8_+_70379077 AK307951	1072064	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	1098023	+	BC041961|C8orf34|116328|chromosome 8 open reading frame 34##NM_001195639|C8orf34|116328|chromosome 8 open reading frame 34##NM_052958|C8orf34|116328|chromosome 8 open reading frame 34##AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AK095341|SULF1|23213|sulfatase 1##NM_001128204|SULF1|23213|sulfatase 1##NM_015170|SULF1|23213|sulfatase 1##AF545571|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1	0.999439	CTCF.p2:-9:0.999
chr16	53544493	53544611	reg1011972.p2	9.562	+	TSC_hg19_v1_chr16_-_53537122 AK303503 BC001134 BC095401 AK222743 AK023320 NM_001012398 NM_022476	-7412	-	TSC_hg19_v1_chr16_+_53479685 BX537767	-64864	+	TSC_hg19_v1_chr16_+_53469560 AK300047	-75006	+	TSC_hg19_v1_chr16_-_53737760 BC136433 AK096333 AK308390 BC017977 CR749645 AK307929 EF565106 NM_001127897 NM_015272 AK304790	193205	-	NM_001080432	193322	+	TSC_hg19_v1_chr16_+_53738067 AK096554 AB051539 AK295196	193516	+	AK303503|AKTIP|64400|AKT interacting protein##BC001134|AKTIP|64400|AKT interacting protein##BC095401|AKTIP|64400|AKT interacting protein##AK222743|AKTIP|64400|AKT interacting protein##AK023320|AKTIP|64400|AKT interacting protein##NM_001012398|AKTIP|64400|AKT interacting protein##NM_022476|AKTIP|64400|AKT interacting protein##BX537767|RBL2|5934|retinoblastoma-like 2 (p130)##AK300047|RBL2|5934|retinoblastoma-like 2 (p130)##BC136433|RPGRIP1L|23322|RPGRIP1-like##AK096333|RPGRIP1L|23322|RPGRIP1-like##AK308390|RPGRIP1L|23322|RPGRIP1-like##BC017977|RPGRIP1L|23322|RPGRIP1-like##CR749645|RPGRIP1L|23322|RPGRIP1-like##AK307929|RPGRIP1L|23322|RPGRIP1-like##EF565106|RPGRIP1L|23322|RPGRIP1-like##NM_001127897|RPGRIP1L|23322|RPGRIP1-like##NM_015272|RPGRIP1L|23322|RPGRIP1-like##AK304790|RPGRIP1L|23322|RPGRIP1-like##NM_001080432|FTO|79068|fat mass and obesity associated##AK096554|FTO|79068|fat mass and obesity associated##AB051539|FTO|79068|fat mass and obesity associated##AK295196|FTO|79068|fat mass and obesity associated	0.999639	CTCF.p2:0:1.000
chr19	30019356	30019475	reg1009976.p1	9.562	+	NM_001146339	-1925	+	TSC_hg19_v1_chr19_-_29704107 NM_006003	-315294	-	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	-315355	-	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	77774	+	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	136934	+	TSC_hg19_v1_chr19_+_30156375 AK225814	137006	+	NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1	0.273229	CTCF.p2:-8:0.273
chr2	157192173	157192321	reg1012607.p2	9.562	+	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	-3084	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	-5557	-	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-1637058	+	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	99711	+	TSC_hg19_v1_chr2_+_157291981 AK290057	99758	+	TSC_hg19_v1_chr2_+_157292178 AB209399 U36310 AK299645	99987	+	S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK290057|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AB209399|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U36310|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK299645|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	0.0	
chr7	55709032	55709161	reg1012455.p1	9.562	+	TSC_hg19_v1_chr7_-_55640198 NM_030796	-68886	-	TSC_hg19_v1_chr7_-_55640196 AK075391 AK225755	-68933	-	BC016650 AK314338 TSC_hg19_v1_chr7_-_55640107	-68991	-	AK301928 NM_207366	221366	-	TSC_hg19_v1_chr7_+_55955148 BC094796 BC048108	246073	+	AK097282 NM_182633 AB464411	271252	+	NM_030796|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK075391|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK225755|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##BC016650|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK314338|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK301928|SEPT14|346288|septin 14##NM_207366|SEPT14|346288|septin 14##BC094796|ZNF713|349075|zinc finger protein 713##AK097282|ZNF713|349075|zinc finger protein 713##NM_182633|ZNF713|349075|zinc finger protein 713	0.410237	CTCF.p2:38:0.220
chr9	4382843	4382974	reg1010511.p1	9.562	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-82877	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-82945	-	TSC_hg19_v1_chr9_-_4299574 DQ438882 DQ438887 DQ438892 DQ438899 DQ438902	-83325	-	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	107529	+	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	279403	+	AK295831 NM_001039395	283761	-	AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##DQ438882|GLIS3|169792|GLIS family zinc finger 3##DQ438887|GLIS3|169792|GLIS family zinc finger 3##DQ438892|GLIS3|169792|GLIS family zinc finger 3##DQ438899|GLIS3|169792|GLIS family zinc finger 3##DQ438902|GLIS3|169792|GLIS family zinc finger 3##NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68	0.39809	CTCF.p2:-22:0.398
chr10	27574172	27574270	reg1011873.p1	9.561	+	TSC_hg19_v1_chr10_-_27531041 AK057469 AF505653 NM_001042473	-43139	-	TSC_hg19_v1_chr10_-_27531030 AB082527	-43206	-	TSC_hg19_v1_chr10_-_27529416 CU688904 AK295031 AK304842 BC025309 BC030555 BC011364 AK294510 NM_145698	-44677	-	JF332167 BC107139 AK126025 NM_001034842	129016	-	TSC_hg19_v1_chr10_+_27793232 AY574034 AK295443 AK297629 AK299457 BC029350 AF087860 BC015014 NM_021252 AL136734 AK223153 AB464117 AF137372 AF498950 AK001555 AM393142 BT009840 CR533455 CU677165	219008	+	BC036207 TSC_hg19_v1_chr10_-_28034752 AK125339 NM_001242702 NM_173576	460540	-	AK057469|ACBD5|91452|acyl-CoA binding domain containing 5##AF505653|ACBD5|91452|acyl-CoA binding domain containing 5##NM_001042473|ACBD5|91452|acyl-CoA binding domain containing 5##AB082527|ACBD5|91452|acyl-CoA binding domain containing 5##AK295031|ACBD5|91452|acyl-CoA binding domain containing 5##AK304842|ACBD5|91452|acyl-CoA binding domain containing 5##BC025309|ACBD5|91452|acyl-CoA binding domain containing 5##BC030555|ACBD5|91452|acyl-CoA binding domain containing 5##BC011364|ACBD5|91452|acyl-CoA binding domain containing 5##AK294510|ACBD5|91452|acyl-CoA binding domain containing 5##NM_145698|ACBD5|91452|acyl-CoA binding domain containing 5##JF332167|PTCHD3|374308|patched domain containing 3##BC107139|PTCHD3|374308|patched domain containing 3##AK126025|PTCHD3|374308|patched domain containing 3##NM_001034842|PTCHD3|374308|patched domain containing 3##AY574034|RAB18|22931|RAB18, member RAS oncogene family##AK295443|RAB18|22931|RAB18, member RAS oncogene family##AK297629|RAB18|22931|RAB18, member RAS oncogene family##AK299457|RAB18|22931|RAB18, member RAS oncogene family##BC029350|RAB18|22931|RAB18, member RAS oncogene family##AF087860|RAB18|22931|RAB18, member RAS oncogene family##BC015014|RAB18|22931|RAB18, member RAS oncogene family##NM_021252|RAB18|22931|RAB18, member RAS oncogene family##AL136734|RAB18|22931|RAB18, member RAS oncogene family##AK223153|RAB18|22931|RAB18, member RAS oncogene family##AF137372|RAB18|22931|RAB18, member RAS oncogene family##AF498950|RAB18|22931|RAB18, member RAS oncogene family##AK001555|RAB18|22931|RAB18, member RAS oncogene family##AM393142|RAB18|22931|RAB18, member RAS oncogene family##BT009840|RAB18|22931|RAB18, member RAS oncogene family##CR533455|RAB18|22931|RAB18, member RAS oncogene family##BC036207|MKX|283078|mohawk homeobox##AK125339|MKX|283078|mohawk homeobox##NM_001242702|MKX|283078|mohawk homeobox##NM_173576|MKX|283078|mohawk homeobox	0.957219	CTCF.p2:19:0.957
chr4	3895482	3895583	reg1010608.p1	9.561	+	J03853 NM_000683	-127237	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-127414	+	TSC_hg19_v1_chr4_-_3534154 BC105074 BC112067 AK292321 NM_002337	-361344	-	BC044637 TSC_hg19_v1_chr4_-_3957162	61623	-	BC130430 BC130432 NM_177998	333085	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	354416	-	J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC105074|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC112067|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK292321|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##NM_002337|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128	1.631974	CTCF.p2:-19:0.892	CTCF.p2:83:0.740
chr5	121531614	121531773	reg1013258.p2	9.561	+	NM_001195535	-35823	+	AK057483 AY461732 NM_207317 AK290985	-66448	+	TSC_hg19_v1_chr5_-_121414058 NM_002317	-117658	-	AK299687 TSC_hg19_v1_chr5_+_121647434	115719	+	TSC_hg19_v1_chr5_+_121647890 DQ227317 NM_001242935 NM_005460 BC094759 BC040552 AK304646 AK310835 AF076929 BC033743	116165	+	BC029465 TSC_hg19_v1_chr5_-_121814783	283090	-	NM_001195535|LOC100505841|100505841|zinc finger protein 474-like##AK057483|ZNF474|133923|zinc finger protein 474##AY461732|ZNF474|133923|zinc finger protein 474##NM_207317|ZNF474|133923|zinc finger protein 474##AK290985|ZNF474|133923|zinc finger protein 474##NM_002317|LOX|4015|lysyl oxidase##AK299687|SNCAIP|9627|synuclein, alpha interacting protein##DQ227317|SNCAIP|9627|synuclein, alpha interacting protein##NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein##NM_005460|SNCAIP|9627|synuclein, alpha interacting protein##BC094759|SNCAIP|9627|synuclein, alpha interacting protein##BC040552|SNCAIP|9627|synuclein, alpha interacting protein##AK304646|SNCAIP|9627|synuclein, alpha interacting protein##AK310835|SNCAIP|9627|synuclein, alpha interacting protein##AF076929|SNCAIP|9627|synuclein, alpha interacting protein##BC033743|SNCAIP|9627|synuclein, alpha interacting protein	0.971726	CTCF.p2:-11:0.972
chr17	44859713	44859847	reg1015144.p1	9.559	+	NM_006178 AF135168 AF102846 AK294001 AK294727 AK294886 AK299786 BC030613 AK226078 AK290204 AK316057 U03985	-191703	+	BC020869 AB209344 AF208864 BX647266 NM_001113738 NM_016632	-202733	-	BC040501 CR749232 NM_001006607	-269705	+	AB464356 AB067628 BC114219 BC112116 BC112118 AY009397 NM_030753	36241	-	AY358217 AK127615 AB063483 NM_003396 BC064534 AB590853	69194	+	TSC_hg19_v1_chr17_+_45000492 NM_001012511 NM_004287 NM_054022	140707	+	NM_006178|NSF|4905|N-ethylmaleimide-sensitive factor##AF135168|NSF|4905|N-ethylmaleimide-sensitive factor##AF102846|NSF|4905|N-ethylmaleimide-sensitive factor##AK294001|NSF|4905|N-ethylmaleimide-sensitive factor##AK294727|NSF|4905|N-ethylmaleimide-sensitive factor##AK294886|NSF|4905|N-ethylmaleimide-sensitive factor##AK299786|NSF|4905|N-ethylmaleimide-sensitive factor##BC030613|NSF|4905|N-ethylmaleimide-sensitive factor##AK226078|NSF|4905|N-ethylmaleimide-sensitive factor##AK290204|NSF|4905|N-ethylmaleimide-sensitive factor##AK316057|NSF|4905|N-ethylmaleimide-sensitive factor##U03985|NSF|4905|N-ethylmaleimide-sensitive factor##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AB209344|ARL17A|51326|ADP-ribosylation factor-like 17A##AF208864|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A##BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_001006607|LRRC37A2|474170|leucine rich repeat containing 37, member A2##AB067628|WNT3|7473|wingless-type MMTV integration site family, member 3##BC114219|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112116|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112118|WNT3|7473|wingless-type MMTV integration site family, member 3##AY009397|WNT3|7473|wingless-type MMTV integration site family, member 3##NM_030753|WNT3|7473|wingless-type MMTV integration site family, member 3##AY358217|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AK127615|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AB063483|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_003396|WNT9B|7484|wingless-type MMTV integration site family, member 9B##BC064534|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_001012511|GOSR2|9570|golgi SNAP receptor complex member 2##NM_004287|GOSR2|9570|golgi SNAP receptor complex member 2##NM_054022|GOSR2|9570|golgi SNAP receptor complex member 2	0.881613	CTCF.p2:4:0.882
chr20	34580795	34580895	reg1011597.p1	9.558	+	AK057454 NM_001207076 NM_080834 BC030782 BC057288 BC114634 BC114945	-24309	+	NM_016558	-37565	-	TSC_hg19_v1_chr20_-_34542404 AF204271 BC000785 AF207829 NM_033630	-38379	-	TSC_hg19_v1_chr20_-_34638883 BC011592 AK090641 AX746554 BC031254	58059	-	TSC_hg19_v1_chr20_+_34680631 AK096848 AK299817 AK126875 BC040259	99806	+	CR936825 NM_177996	119457	+	AK057454|C20orf152|140894|chromosome 20 open reading frame 152##NM_001207076|C20orf152|140894|chromosome 20 open reading frame 152##NM_080834|C20orf152|140894|chromosome 20 open reading frame 152##BC030782|C20orf152|140894|chromosome 20 open reading frame 152##BC057288|C20orf152|140894|chromosome 20 open reading frame 152##BC114634|C20orf152|140894|chromosome 20 open reading frame 152##BC114945|C20orf152|140894|chromosome 20 open reading frame 152##NM_016558|SCAND1|51282|SCAN domain containing 1##AF204271|SCAND1|51282|SCAN domain containing 1##BC000785|SCAND1|51282|SCAN domain containing 1##AF207829|SCAND1|51282|SCAN domain containing 1##NM_033630|SCAND1|51282|SCAN domain containing 1##BC011592|LOC647979|647979|uncharacterized LOC647979##AK090641|LOC647979|647979|uncharacterized LOC647979##AK096848|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK299817|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK126875|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##BC040259|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##CR936825|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##NM_177996|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1	0.994899	CTCF.p2:-9:0.995
chr2	208838056	208838167	reg1011853.p2	9.558	+	U43318 AB043702 NM_003468	-204015	-	TSC_hg19_v1_chr2_+_208576466 BC067253	-261611	+	TSC_hg19_v1_chr2_+_208576365 BC047293	-261716	+	TSC_hg19_v1_chr2_-_208890252 BX648983 NM_001080475	52153	-	HQ258094 U66583 BC117338 BC117340 NM_006891	151085	-	AB590655 U66582 BC074954 BC074955 NM_020989	156369	-	U43318|FZD5|7855|frizzled family receptor 5##AB043702|FZD5|7855|frizzled family receptor 5##NM_003468|FZD5|7855|frizzled family receptor 5##BC067253|CCNYL1|151195|cyclin Y-like 1##BC047293|CCNYL1|151195|cyclin Y-like 1##BX648983|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##NM_001080475|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##HQ258094|CRYGD|1421|crystallin, gamma D##U66583|CRYGD|1421|crystallin, gamma D##BC117338|CRYGD|1421|crystallin, gamma D##BC117340|CRYGD|1421|crystallin, gamma D##NM_006891|CRYGD|1421|crystallin, gamma D##U66582|CRYGC|1420|crystallin, gamma C##BC074954|CRYGC|1420|crystallin, gamma C##BC074955|CRYGC|1420|crystallin, gamma C##NM_020989|CRYGC|1420|crystallin, gamma C	0.944227	CTCF.p2:17:0.944
chr5	81461860	81461987	reg1014791.p1	9.558	+	TSC_hg19_v1_chr5_+_81268100 AL136912	-193825	+	AF318326 TSC_hg19_v1_chr5_+_81267992	-193933	+	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	-194078	+	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	112248	-	TSC_hg19_v1_chr5_-_81574219 NM_001025	112296	-	BC093982 BC112191 NM_001017971	139242	+	AL136912|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AF318326|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##NM_001025|RPS23|6228|ribosomal protein S23##BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like	0.0	
chr17	77715849	77715959	reg1012411.p1	9.556	+	AY230663 BC041453 NM_178543 AY358622	-11015	+	NM_001082575	-237342	-	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-644874	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	36077	+	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	55003	-	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	97238	-	AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4	0.01808	
chr6	90081897	90082021	reg1013527.p1	9.556	+	TSC_hg19_v1_chr6_-_90062622 NM_016021	-19172	-	TSC_hg19_v1_chr6_-_90062559 AK290574 BC013973	-19444	-	TSC_hg19_v1_chr6_-_90062439 AK223464 AK300629	-19519	-	BC003088 AF272036 AL137502 TSC_hg19_v1_chr6_-_90121800	39781	-	TSC_hg19_v1_chr6_-_90121945 AK289799	39969	-	TSC_hg19_v1_chr6_-_90121986 NM_021244	40165	-	NM_016021|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AK290574|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##BC013973|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AK223464|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AK300629|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##BC003088|RRAGD|58528|Ras-related GTP binding D##AF272036|RRAGD|58528|Ras-related GTP binding D##AL137502|RRAGD|58528|Ras-related GTP binding D##AK289799|RRAGD|58528|Ras-related GTP binding D##NM_021244|RRAGD|58528|Ras-related GTP binding D	0.98183	CTCF.p2:-7:0.982
chr10	135333742	135333865	reg1011994.p1	9.555	+	BC040198 TSC_hg19_v1_chr10_-_135238130 NM_001012508	-95701	-	TSC_hg19_v1_chr10_+_135207660 NM_138384 BC026039 AK308997 BC004409 AK074976 AK293988 BC035721 EU831415 EU831508 BC026725 AK292515 AK125012	-126071	+	AF312698 BC032778 NM_152911 NM_207127 NM_207128 TSC_hg19_v1_chr10_+_135192774 AY541516 AY541513 AY541514 AY541515 AY541517 AY541518 AY541519 AY541520 AY541521 AY541523 AY541524 AY358418 DQ891313 DQ893351 DQ894497 DQ896670	-141046	+	TSC_hg19_v1_chr10_+_135340866 AK290822 NM_000773 J02625 AF182276 DQ149222 BC067435 BC067433 CU688292 AF084225 AJ853939 AJ853940 AJ877238	7129	+	AK309935 AK314978 BC034821 NM_001143763 NM_001143764	45306	-	AY027807 NM_130784	49072	-	BC040198|SPRN|503542|shadow of prion protein homolog (zebrafish)##NM_001012508|SPRN|503542|shadow of prion protein homolog (zebrafish)##NM_138384|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026039|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK308997|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC004409|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK074976|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK293988|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC035721|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831415|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831508|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026725|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK292515|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK125012|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AF312698|PAOX|196743|polyamine oxidase (exo-N4-amino)##BC032778|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_152911|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207127|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207128|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541516|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541513|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541514|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541515|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541517|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541518|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541519|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541520|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541521|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541523|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541524|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY358418|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ891313|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ893351|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ894497|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ896670|PAOX|196743|polyamine oxidase (exo-N4-amino)##AK290822|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##NM_000773|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##J02625|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF182276|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##DQ149222|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067435|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067433|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF084225|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853939|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853940|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ877238|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AK309935|SYCE1|93426|synaptonemal complex central element protein 1##AK314978|SYCE1|93426|synaptonemal complex central element protein 1##BC034821|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143763|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143764|SYCE1|93426|synaptonemal complex central element protein 1##AY027807|SYCE1|93426|synaptonemal complex central element protein 1##NM_130784|SYCE1|93426|synaptonemal complex central element protein 1	0.999406	CTCF.p2:8:0.999
chr12	6147432	6147528	reg1011867.p1	9.555	+	AJ272204 NM_020373	-92083	-	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	-93006	-	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	-544142	+	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	86279	-	TSC_hg19_v1_chr12_+_6309565 NM_001769 AK315219 AK308700 AK296332 AK309527 AY966455 X60111 AK296894 AK298431 BC011988 M38690 AY423720 DQ891314 DQ894498 AB590218 CU680148 L34068	162090	+	AK001527 NM_018173 BC104751 BC105961 BC109095	272153	+	AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor##NM_001769|CD9|928|CD9 molecule##AK315219|CD9|928|CD9 molecule##AK308700|CD9|928|CD9 molecule##AK296332|CD9|928|CD9 molecule##AK309527|CD9|928|CD9 molecule##AY966455|CD9|928|CD9 molecule##X60111|CD9|928|CD9 molecule##AK296894|CD9|928|CD9 molecule##AK298431|CD9|928|CD9 molecule##BC011988|CD9|928|CD9 molecule##M38690|CD9|928|CD9 molecule##AY423720|CD9|928|CD9 molecule##DQ891314|CD9|928|CD9 molecule##DQ894498|CD9|928|CD9 molecule##L34068|CD9|928|CD9 molecule##AK001527|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_018173|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC104751|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC105961|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC109095|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6	0.942116	CTCF.p2:-55:0.915
chr6	122170775	122170893	reg1011629.p1	9.555	+	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	-414009	+	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	-515191	-	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-2499913	-	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	549861	+	TSC_hg19_v1_chr6_+_122720796 AK225593 AK225594 BC112323 M65217 AK294624 BC005329 BC064622 BC121050 BC121051 BC128420 AK316377 AB463722 CU675115 EU446897	549982	+	CU688532 CU689596 AL137261 TSC_hg19_v1_chr6_-_122792947 AF164794 AB033079 BC014412 BC028607 BC033029 NM_020755 AK075339 AY358429 AK128781 AF087902	622119	-	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2##AK225593|HSF2|3298|heat shock transcription factor 2##AK225594|HSF2|3298|heat shock transcription factor 2##BC112323|HSF2|3298|heat shock transcription factor 2##M65217|HSF2|3298|heat shock transcription factor 2##AK294624|HSF2|3298|heat shock transcription factor 2##BC005329|HSF2|3298|heat shock transcription factor 2##BC064622|HSF2|3298|heat shock transcription factor 2##BC121050|HSF2|3298|heat shock transcription factor 2##BC121051|HSF2|3298|heat shock transcription factor 2##BC128420|HSF2|3298|heat shock transcription factor 2##AK316377|HSF2|3298|heat shock transcription factor 2##EU446897|HSF2|3298|heat shock transcription factor 2##AL137261|SERINC1|57515|serine incorporator 1##AF164794|SERINC1|57515|serine incorporator 1##AB033079|SERINC1|57515|serine incorporator 1##BC014412|SERINC1|57515|serine incorporator 1##BC028607|SERINC1|57515|serine incorporator 1##BC033029|SERINC1|57515|serine incorporator 1##NM_020755|SERINC1|57515|serine incorporator 1##AK075339|SERINC1|57515|serine incorporator 1##AY358429|SERINC1|57515|serine incorporator 1##AF087902|SERINC1|57515|serine incorporator 1	0.938598	CTCF.p2:17:0.939
chr3	185293299	185293425	reg1012953.p1	9.554	+	CU687970 TSC_hg19_v1_chr3_-_185270374 AK298380 AY036912 AY093498 EF186228 EF186229 BC064941 AK122651 NM_139248	-23034	-	TSC_hg19_v1_chr3_-_185216824 EU831805 EU831882 AK313954 BC019884 BC008043 BX647928 AY358547 AK172748 AK290878 NM_080652	-76663	-	BC026249 NM_004721 AK296961 AB001872 BC111726	-212430	+	AK304402 TSC_hg19_v1_chr3_+_185304106 AF151697 NM_021627 AK296772 AK027599 AK296744 BC040609 CU691906 AB037752 AB385449 AL834380	10721	+	CU676908 DQ892161 EU176689 TSC_hg19_v1_chr3_-_185542803 AK309611 AF117107 BC012322	249412	-	TSC_hg19_v1_chr3_-_185542828 BC021290 AK290664 NM_001007225 NM_006548	249469	-	AK298380|LIPH|200879|lipase, member H##AY036912|LIPH|200879|lipase, member H##AY093498|LIPH|200879|lipase, member H##EF186228|LIPH|200879|lipase, member H##EF186229|LIPH|200879|lipase, member H##BC064941|LIPH|200879|lipase, member H##AK122651|LIPH|200879|lipase, member H##NM_139248|LIPH|200879|lipase, member H##EU831805|TMEM41A|90407|transmembrane protein 41A##EU831882|TMEM41A|90407|transmembrane protein 41A##AK313954|TMEM41A|90407|transmembrane protein 41A##BC019884|TMEM41A|90407|transmembrane protein 41A##BC008043|TMEM41A|90407|transmembrane protein 41A##BX647928|TMEM41A|90407|transmembrane protein 41A##AY358547|TMEM41A|90407|transmembrane protein 41A##AK172748|TMEM41A|90407|transmembrane protein 41A##AK290878|TMEM41A|90407|transmembrane protein 41A##NM_080652|TMEM41A|90407|transmembrane protein 41A##NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##DQ892161|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##EU176689|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK309611|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AF117107|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##BC021290|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK290664|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##NM_001007225|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##NM_006548|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2	0.721341	CTCF.p2:8:0.721
chr3	69474514	69474645	reg1014403.p1	9.554	+	NM_015123 BC057836	-39138	-	AB023230 TSC_hg19_v1_chr3_-_69435240	-39348	-	TSC_hg19_v1_chr3_-_69299315 AK295045	-175269	-	TSC_hg19_v1_chr3_-_69591738 AK091076	117178	-	TSC_hg19_v1_chr3_+_69788632 NM_198159 AK291318 AL110195 AB006909 AB527520	314074	+	TSC_hg19_v1_chr3_+_69812620 AK296129 NM_001184967	338084	+	NM_015123|FRMD4B|23150|FERM domain containing 4B##BC057836|FRMD4B|23150|FERM domain containing 4B##AB023230|FRMD4B|23150|FERM domain containing 4B##AK295045|FRMD4B|23150|FERM domain containing 4B##AK091076|FRMD4B|23150|FERM domain containing 4B##NM_198159|MITF|4286|microphthalmia-associated transcription factor##AK291318|MITF|4286|microphthalmia-associated transcription factor##AL110195|MITF|4286|microphthalmia-associated transcription factor##AB006909|MITF|4286|microphthalmia-associated transcription factor##AK296129|MITF|4286|microphthalmia-associated transcription factor##NM_001184967|MITF|4286|microphthalmia-associated transcription factor	0.0	
chr4	187058721	187058843	reg1010171.p2	9.554	+	BC017954 NM_003265 AK314208 BC068487 BC094737 TSC_hg19_v1_chr4_+_186990309 BC059372 BC096333 BC096334 BC096335 DQ445682 U88879	-68453	+	NM_021069	-180913	-	AK295742 AK056628 BC035329 AB018320 TSC_hg19_v1_chr4_-_186877527	-181310	-	NM_015398 TSC_hg19_v1_chr4_+_187065998 BC142992 BC110816	7263	+	NM_001006655 AF173894	11576	+	TSC_hg19_v1_chr4_+_187112641 AY422002 NM_207352	53878	+	BC017954|TLR3|7098|toll-like receptor 3##NM_003265|TLR3|7098|toll-like receptor 3##AK314208|TLR3|7098|toll-like receptor 3##BC068487|TLR3|7098|toll-like receptor 3##BC094737|TLR3|7098|toll-like receptor 3##BC059372|TLR3|7098|toll-like receptor 3##BC096333|TLR3|7098|toll-like receptor 3##BC096334|TLR3|7098|toll-like receptor 3##BC096335|TLR3|7098|toll-like receptor 3##DQ445682|TLR3|7098|toll-like receptor 3##U88879|TLR3|7098|toll-like receptor 3##NM_021069|SORBS2|8470|sorbin and SH3 domain containing 2##AK295742|SORBS2|8470|sorbin and SH3 domain containing 2##AK056628|SORBS2|8470|sorbin and SH3 domain containing 2##BC035329|SORBS2|8470|sorbin and SH3 domain containing 2##AB018320|SORBS2|8470|sorbin and SH3 domain containing 2##NM_015398|FAM149A|25854|family with sequence similarity 149, member A##BC142992|FAM149A|25854|family with sequence similarity 149, member A##BC110816|FAM149A|25854|family with sequence similarity 149, member A##NM_001006655|FAM149A|25854|family with sequence similarity 149, member A##AF173894|FAM149A|25854|family with sequence similarity 149, member A##AY422002|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##NM_207352|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2	0.823771	CTCF.p2:4:0.824
chr4	93308746	93308884	reg1014453.p1	9.554	+	AB209318 NM_001510 AK308611	-83223	+	BC051694 NM_207491	-2152634	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-2260097	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	1441246	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	1819996	+	TSC_hg19_v1_chr4_+_95129015 NM_001128429 NM_020159 BC045534 AY008271 BC041800	1820299	+	AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.913963	CTCF.p2:7:0.914
chr8	19991327	19991428	reg1011667.p2	9.553	+	TSC_hg19_v1_chr8_+_19796933 AB384743 BT006726 CR457054 DQ893541 DQ893751	-194437	+	X14390 TSC_hg19_v1_chr8_+_19796864 BC011353	-194512	+	TSC_hg19_v1_chr8_+_19796763 AK092286 AK290290 AK222464 AK312311 M15856 X54516	-194608	+	AK313720 BC006317 BC009387 NM_001135691 NM_001142324 NM_001142325 NM_003053 U39905	49287	-	NM_001693 TSC_hg19_v1_chr8_+_20054882	63415	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	63516	+	BT006726|LPL|4023|lipoprotein lipase##CR457054|LPL|4023|lipoprotein lipase##DQ893541|LPL|4023|lipoprotein lipase##DQ893751|LPL|4023|lipoprotein lipase##X14390|LPL|4023|lipoprotein lipase##BC011353|LPL|4023|lipoprotein lipase##AK092286|LPL|4023|lipoprotein lipase##AK290290|LPL|4023|lipoprotein lipase##AK222464|LPL|4023|lipoprotein lipase##AK312311|LPL|4023|lipoprotein lipase##M15856|LPL|4023|lipoprotein lipase##X54516|LPL|4023|lipoprotein lipase##AK313720|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##BC006317|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##BC009387|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001135691|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001142324|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001142325|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_003053|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##U39905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001693|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2	0.998368	CTCF.p2:4:0.998
chr1	201055165	201055282	reg1012454.p2	9.552	+	TSC_hg19_v1_chr1_+_200993085 AK022893 BC037533 BC016656	-62136	+	TSC_hg19_v1_chr1_-_200992826 AB007918 NM_001252100 NM_001252102 NM_001252103 NM_017596	-62392	-	AM177180 AB527174 BC137281 BC144557 TSC_hg19_v1_chr1_-_200992598	-62669	-	L33798 NM_000069	26470	-	TSC_hg19_v1_chr1_-_201123569 AK091726	68348	-	AK075335 AY138587 AK296307 TSC_hg19_v1_chr1_-_201123603 BC001106 AL136600 AK054883 AK303843 NM_016456	68389	-	AB007918|KIF21B|23046|kinesin family member 21B##NM_001252100|KIF21B|23046|kinesin family member 21B##NM_001252102|KIF21B|23046|kinesin family member 21B##NM_001252103|KIF21B|23046|kinesin family member 21B##NM_017596|KIF21B|23046|kinesin family member 21B##AM177180|KIF21B|23046|kinesin family member 21B##BC137281|KIF21B|23046|kinesin family member 21B##BC144557|KIF21B|23046|kinesin family member 21B##L33798|CACNA1S|779|calcium channel, voltage-dependent, L type, alpha 1S subunit##NM_000069|CACNA1S|779|calcium channel, voltage-dependent, L type, alpha 1S subunit##AK091726|TMEM9|252839|transmembrane protein 9##AK075335|TMEM9|252839|transmembrane protein 9##AY138587|TMEM9|252839|transmembrane protein 9##AK296307|TMEM9|252839|transmembrane protein 9##BC001106|TMEM9|252839|transmembrane protein 9##AL136600|TMEM9|252839|transmembrane protein 9##AK054883|TMEM9|252839|transmembrane protein 9##AK303843|TMEM9|252839|transmembrane protein 9##NM_016456|TMEM9|252839|transmembrane protein 9	1.079774	CTCF.p2:-3:0.999
chr17	47485478	47485601	reg1011025.p2	9.552	+	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	-45959	-	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	-177396	-	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-197462	+	BC095460 TSC_hg19_v1_chr17_-_47492215	6676	-	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	6709	-	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	87149	+	CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##BC095460|PHB|5245|prohibitin##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor	1.101756	CTCF.p2:-5:0.995
chr20	62670430	62670556	reg1011331.p3	9.552	+	TSC_hg19_v1_chr20_+_62612576 AB527848	-57907	+	AF221842 TSC_hg19_v1_chr20_+_62612506 AF026031 AK314310 AB019219 BC001666	-57962	+	TSC_hg19_v1_chr20_+_62612487 AK225993 AK001554	-58016	+	AJ243896 AF270652 BC111390 NM_018419 BC035513 BC038590 BC073971 TSC_hg19_v1_chr20_-_62680993 AB033888	10445	-	NM_198723	17945	+	NM_003195	23516	+	AF221842|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF026031|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK314310|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AB019219|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##BC001666|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK225993|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK001554|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AJ243896|SOX18|54345|SRY (sex determining region Y)-box 18##AF270652|SOX18|54345|SRY (sex determining region Y)-box 18##BC111390|SOX18|54345|SRY (sex determining region Y)-box 18##NM_018419|SOX18|54345|SRY (sex determining region Y)-box 18##BC035513|SOX18|54345|SRY (sex determining region Y)-box 18##BC038590|SOX18|54345|SRY (sex determining region Y)-box 18##BC073971|SOX18|54345|SRY (sex determining region Y)-box 18##AB033888|SOX18|54345|SRY (sex determining region Y)-box 18##NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2	0.806899	CTCF.p2:8:0.807
chr7	27729327	27729450	reg1014735.p1	9.552	+	TSC_hg19_v1_chr7_-_27702556 AK311650 NM_152740	-26811	-	TSC_hg19_v1_chr7_-_27702469 AF529362 DQ894677 AK316605 BC020167 AB050000 BC032324	-26960	-	AK299188 NM_001989	-447225	+	AK299729 NM_001206901	49603	+	TSC_hg19_v1_chr7_+_27779734 NM_001079864 NM_001206902 NM_006024	50336	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	50387	+	NM_152740|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AF529362|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##DQ894677|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AK316605|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##BC020167|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AB050000|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##BC032324|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AK299188|EVX1|2128|even-skipped homeobox 1##NM_001989|EVX1|2128|even-skipped homeobox 1##AK299729|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##NM_001206901|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##NM_001079864|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##NM_001206902|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##NM_006024|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	0.975211	CTCF.p2:-17:0.975
chr12	77404848	77404968	reg1013362.p1	9.551	+	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-132125	-	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	-246882	+	TSC_hg19_v1_chr12_+_77157894 BC050324 AB023163	-247004	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	54381	-	NM_014903 AJ488201	820224	+	AK094616 NM_001135805	1852864	+	BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC050324|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB023163|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I	0.698965	CTCF.p2:-1:0.699
chr15	45455378	45455482	reg1012552.p2	9.551	+	AK290372 AF213465 NM_017434 NM_175940 AK075268 AF230495 BC114628 BC114938	-33264	+	BC029819 NM_144565 AK292771 BC020841 TSC_hg19_v1_chr15_-_45422078 AK056896	-33362	-	TSC_hg19_v1_chr15_+_45406523 NM_207581 AK303955 BC137465 BX537581 DQ489734	-48836	+	TSC_hg19_v1_chr15_-_45480165 AK094391 AK303749	24734	-	AK096267 NM_138356	37942	-	AK222709 NM_004212 U84392 AK291974	89011	+	AK290372|DUOX1|53905|dual oxidase 1##AF213465|DUOX1|53905|dual oxidase 1##NM_017434|DUOX1|53905|dual oxidase 1##NM_175940|DUOX1|53905|dual oxidase 1##AK075268|DUOX1|53905|dual oxidase 1##AF230495|DUOX1|53905|dual oxidase 1##BC114628|DUOX1|53905|dual oxidase 1##BC114938|DUOX1|53905|dual oxidase 1##BC029819|DUOXA1|90527|dual oxidase maturation factor 1##NM_144565|DUOXA1|90527|dual oxidase maturation factor 1##AK292771|DUOXA1|90527|dual oxidase maturation factor 1##BC020841|DUOXA1|90527|dual oxidase maturation factor 1##AK056896|DUOXA1|90527|dual oxidase maturation factor 1##NM_207581|DUOXA2|405753|dual oxidase maturation factor 2##AK303955|DUOXA2|405753|dual oxidase maturation factor 2##BC137465|DUOXA2|405753|dual oxidase maturation factor 2##BX537581|DUOXA2|405753|dual oxidase maturation factor 2##DQ489734|DUOXA2|405753|dual oxidase maturation factor 2##AK094391|SHF|90525|Src homology 2 domain containing F##AK303749|SHF|90525|Src homology 2 domain containing F##AK096267|SHF|90525|Src homology 2 domain containing F##NM_138356|SHF|90525|Src homology 2 domain containing F##AK222709|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##NM_004212|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##U84392|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK291974|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2	0.516132	CTCF.p2:-4:0.486
chr17	71952852	71952951	reg1011900.p1	9.551	+	NM_001144952	-312675	-	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-644761	-	BC157870 NM_001129885	-694883	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	246914	+	TSC_hg19_v1_chr17_+_72199849 BC000603	246952	+	TSC_hg19_v1_chr17_+_72209709 NM_032646 BC107492 BC107602 AK315163 AF319952 BC005168	256768	+	NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38##NM_032646|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107492|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107602|TTYH2|94015|tweety homolog 2 (Drosophila)##AK315163|TTYH2|94015|tweety homolog 2 (Drosophila)##AF319952|TTYH2|94015|tweety homolog 2 (Drosophila)##BC005168|TTYH2|94015|tweety homolog 2 (Drosophila)	0.995664	CTCF.p2:19:0.996
chr1_gl000191_random	97903	98030	reg1012514.p2	9.551	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.723819	CTCF.p2:0:0.724
chr20	61531731	61531846	reg1012627.p2	9.551	+	AF070992 AB012124 BC065520 BC046933 NM_006602 TSC_hg19_v1_chr20_-_61493138	-38732	-	NM_080750	-55313	+	TSC_hg19_v1_chr20_+_61448401 BC011705 NM_001853 DQ892946 DQ896194 L41162	-83385	+	TSC_hg19_v1_chr20_-_61557824 BC014615 BC014489	26033	-	TSC_hg19_v1_chr20_-_61557842 AY481571 AY481572	26068	-	TSC_hg19_v1_chr20_-_61557874 NM_001193369 NM_001193370 NM_080796	26100	-	AF070992|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##AB012124|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC065520|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC046933|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##NM_006602|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##NM_080750|DPH3P1|100132911|DPH3, KTI11 homolog (S. cerevisiae) pseudogene 1##BC011705|COL9A3|1299|collagen, type IX, alpha 3##NM_001853|COL9A3|1299|collagen, type IX, alpha 3##DQ892946|COL9A3|1299|collagen, type IX, alpha 3##DQ896194|COL9A3|1299|collagen, type IX, alpha 3##L41162|COL9A3|1299|collagen, type IX, alpha 3##BC014615|DIDO1|11083|death inducer-obliterator 1##BC014489|DIDO1|11083|death inducer-obliterator 1##AY481571|DIDO1|11083|death inducer-obliterator 1##AY481572|DIDO1|11083|death inducer-obliterator 1##NM_001193369|DIDO1|11083|death inducer-obliterator 1##NM_001193370|DIDO1|11083|death inducer-obliterator 1##NM_080796|DIDO1|11083|death inducer-obliterator 1	0.995287	CTCF.p2:-6:0.995
chr4	9497243	9497391	reg1015313.p1	9.551	+	AF529414 NM_001040448	-51058	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-132464	+	AF544012 BC100991 NM_001105662	-137209	+	NM_000798	285940	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	525807	-	AK310895 BC018897 NM_001001290 AK096819	544605	-	AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF544012|USP17|391627|ubiquitin specific peptidase 17##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_000798|DRD5|1816|dopamine receptor D5##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.996917	CTCF.p2:-10:0.997
chr10	113875683	113875790	reg1012880.p1	9.548	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	-1038884	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-1196356	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-1196376	+	AB046780 TSC_hg19_v1_chr10_-_113933602	57825	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	67769	-	BC113497 BC113499 AF312827 HQ258194 NM_058222	167716	+	NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta	0.966071	CTCF.p2:0:0.966
chr10	54248778	54248917	reg1014400.p1	9.548	+	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-174732	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-789500	-	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-1414556	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	282579	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2312151	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	3109927	+	NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5	0.950412	CTCF.p2:2:0.912
chr12	102233683	102233803	reg1011557.p1	9.548	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	-9157	-	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	-100524	-	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	-142121	+	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	37375	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	37715	+	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	222007	-	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1##CR457171|CCDC53|51019|coiled-coil domain containing 53	0.99749	CTCF.p2:-14:0.997
chr1	248850253	248850384	reg1012843.p2	9.547	+	NM_001004734 BC137188 BC137189	-4702	-	NM_001001824	-36134	-	NM_001001827 AB528813	-47759	-	AY358453 TSC_hg19_v1_chr1_-_249120082 AK056382 NM_030645	269790	-	TSC_hg19_v1_chr1_+_249132449 BC029310	282139	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	282227	+	NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##NM_001001824|OR2T27|403239|olfactory receptor, family 2, subfamily T, member 27##NM_001001827|OR2T35|403244|olfactory receptor, family 2, subfamily T, member 35##AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like##AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like##BC029310|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672	0.0	
chr4	123523848	123523997	reg1014738.p1	9.547	+	AF532913 AY283686 AY523040 DQ231169 S77835 AB451325 AB451454 AB591003 CU688118 DQ861285 AF228636 BC066254 BC066255 BC066256 BC066257 BC070338 S77834 U25676 V00564 NM_000586 X01586	-146336	-	NM_001159285 NM_001159295 BC040229 AK093297 AX748040	-223290	+	NM_139243 AK057303	-223779	+	CU688120 CU688122 DQ645417 BC069124 BC066258 BC066259 BC066260 BC066261 BC066262 NM_001207006 NM_021803 AF254069	18266	-	AK123553 NM_001178007 NM_152618 BC055426 TSC_hg19_v1_chr4_+_123653916 BX538148	129983	+	TSC_hg19_v1_chr4_+_123747833 J04513 NM_002006 BC111737 BC118573 BC118654	223922	+	AF532913|IL2|3558|interleukin 2##AY283686|IL2|3558|interleukin 2##AY523040|IL2|3558|interleukin 2##DQ231169|IL2|3558|interleukin 2##S77835|IL2|3558|interleukin 2##AB451325|IL2|3558|interleukin 2##AB451454|IL2|3558|interleukin 2##DQ861285|IL2|3558|interleukin 2##AF228636|IL2|3558|interleukin 2##BC066254|IL2|3558|interleukin 2##BC066255|IL2|3558|interleukin 2##BC066256|IL2|3558|interleukin 2##BC066257|IL2|3558|interleukin 2##BC070338|IL2|3558|interleukin 2##S77834|IL2|3558|interleukin 2##U25676|IL2|3558|interleukin 2##V00564|IL2|3558|interleukin 2##NM_000586|IL2|3558|interleukin 2##X01586|IL2|3558|interleukin 2##NM_001159285|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##NM_001159295|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##BC040229|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK093297|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##NM_139243|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK057303|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##DQ645417|IL21|59067|interleukin 21##BC069124|IL21|59067|interleukin 21##BC066258|IL21|59067|interleukin 21##BC066259|IL21|59067|interleukin 21##BC066260|IL21|59067|interleukin 21##BC066261|IL21|59067|interleukin 21##BC066262|IL21|59067|interleukin 21##NM_001207006|IL21|59067|interleukin 21##NM_021803|IL21|59067|interleukin 21##AF254069|IL21|59067|interleukin 21##AK123553|BBS12|166379|Bardet-Biedl syndrome 12##NM_001178007|BBS12|166379|Bardet-Biedl syndrome 12##NM_152618|BBS12|166379|Bardet-Biedl syndrome 12##BC055426|BBS12|166379|Bardet-Biedl syndrome 12##BX538148|BBS12|166379|Bardet-Biedl syndrome 12##J04513|FGF2|2247|fibroblast growth factor 2 (basic)##NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)##BC111737|FGF2|2247|fibroblast growth factor 2 (basic)	0.192658	
chr7	126443246	126443392	reg1012343.p2	9.547	+	NM_001042594 NM_015450	-1873283	-	BC130600 BC130604 NM_001024603	-2012517	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	-2037523	-	NM_000845	440249	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	449046	-	TSC_hg19_v1_chr7_-_126893165 AK290197	449833	-	NM_001042594|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_015450|POT1|25913|protection of telomeres 1 homolog (S. pombe)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##AK290197|GRM8|2918|glutamate receptor, metabotropic 8	0.998089	CTCF.p2:-4:0.998
chr1	207106805	207106926	reg1014171.p1	9.545	+	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	-11578	-	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	-36065	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	-67690	+	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	12896	-	AK298394 NM_001122979 NM_001170631 NM_032029	37091	-	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	99183	-	BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116	0.998341	CTCF.p2:1:0.998
chr20	30622983	30623104	reg1011604.p1	9.545	+	NM_080625 AK057090 BC030254	-24795	+	AY534245 NM_001011718 TSC_hg19_v1_chr20_+_30555960	-67154	+	TSC_hg19_v1_chr20_-_30539856 NM_030815 AY286301	-83172	-	TSC_hg19_v1_chr20_+_30640055 NM_001172129 NM_001172130 NM_001172131 NM_001172132 NM_001172133 NM_002110 AK289896 AK225819 AK290928 AK298726 AK026432 BC108930 BC108931 BC113854 BC114463 AK314335 BC073748 BC094847 BC014435	17003	+	TSC_hg19_v1_chr20_+_30697308 NM_014742	74326	+	TSC_hg19_v1_chr20_+_30697532 AK126534 AK294980 AK296500 AK302439 BC021107 D87444	74498	+	NM_080625|C20orf160|140706|chromosome 20 open reading frame 160##AK057090|C20orf160|140706|chromosome 20 open reading frame 160##BC030254|C20orf160|140706|chromosome 20 open reading frame 160##AY534245|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_001011718|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_030815|PDRG1|81572|p53 and DNA-damage regulated 1##AY286301|PDRG1|81572|p53 and DNA-damage regulated 1##NM_001172129|HCK|3055|hemopoietic cell kinase##NM_001172130|HCK|3055|hemopoietic cell kinase##NM_001172131|HCK|3055|hemopoietic cell kinase##NM_001172132|HCK|3055|hemopoietic cell kinase##NM_001172133|HCK|3055|hemopoietic cell kinase##NM_002110|HCK|3055|hemopoietic cell kinase##AK289896|HCK|3055|hemopoietic cell kinase##AK225819|HCK|3055|hemopoietic cell kinase##AK290928|HCK|3055|hemopoietic cell kinase##AK298726|HCK|3055|hemopoietic cell kinase##AK026432|HCK|3055|hemopoietic cell kinase##BC108930|HCK|3055|hemopoietic cell kinase##BC108931|HCK|3055|hemopoietic cell kinase##BC113854|HCK|3055|hemopoietic cell kinase##BC114463|HCK|3055|hemopoietic cell kinase##AK314335|HCK|3055|hemopoietic cell kinase##BC073748|HCK|3055|hemopoietic cell kinase##BC094847|HCK|3055|hemopoietic cell kinase##BC014435|HCK|3055|hemopoietic cell kinase##NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4##BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4##D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4	0.215975	CTCF.p2:-9:0.216
chr14	105837284	105837395	reg1013088.p1	9.544	+	AK295579 AK294899 NM_001242786 NM_001242787	-55470	-	TSC_hg19_v1_chr14_+_105781197 BC050351 AB385359	-56077	+	TSC_hg19_v1_chr14_+_105781053 AB011174 BC065220	-56299	+	TSC_hg19_v1_chr14_+_105864874 NM_001195082	27546	+	TSC_hg19_v1_chr14_+_105865463 AK124813	28193	+	AK123017 TSC_hg19_v1_chr14_-_105886160	48796	-	AK295579|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##AK294899|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_001242786|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_001242787|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##BC050351|PACS2|23241|phosphofurin acidic cluster sorting protein 2##AB011174|PACS2|23241|phosphofurin acidic cluster sorting protein 2##BC065220|PACS2|23241|phosphofurin acidic cluster sorting protein 2##NM_001195082|TEX22|647310|testis expressed 22##AK123017|LOC100507437|100507437|uncharacterized LOC100507437	0.990347	CTCF.p2:-13:0.990
chr5	132682881	132682979	reg1010795.p1	9.544	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-250039	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-254527	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-276827	+	TSC_hg19_v1_chr5_-_132948202 AK055684	265269	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	265308	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	621445	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.0	
chr8	103875378	103875497	reg1012567.p2	9.544	+	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	-207505	-	BC011538 NM_001032282 S81439	-209345	-	NM_024410 AK315276 BC104456 BC104457	-311576	+	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	922	-	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	958	-	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	157830	+	AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1##BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1	0.992388	CTCF.p2:-3:0.439	CTCF.p2:55:0.453
chr1	45195060	45195192	reg1010832.p1	9.543	+	BC026115 NM_001145636	-54733	+	AK296548 TSC_hg19_v1_chr1_-_45140143 BC007521	-54978	-	CR457348 AK026006 AK225405 TSC_hg19_v1_chr1_-_45140099 BC064520 NM_024587 AL832539	-55039	-	TSC_hg19_v1_chr1_+_45205518 AB264115 NM_006845	10372	+	AK124208 AK300756 AK312606 TSC_hg19_v1_chr1_+_45205533 BC008764 U63743 BC014924	10416	+	TSC_hg19_v1_chr1_+_45205568 AK290688 AB590244 BT006759 CR450302 CU677119 CU679091 DQ893800 EU176178	10455	+	BC026115|C1orf228|339541|chromosome 1 open reading frame 228##NM_001145636|C1orf228|339541|chromosome 1 open reading frame 228##AK296548|TMEM53|79639|transmembrane protein 53##BC007521|TMEM53|79639|transmembrane protein 53##CR457348|TMEM53|79639|transmembrane protein 53##AK026006|TMEM53|79639|transmembrane protein 53##AK225405|TMEM53|79639|transmembrane protein 53##BC064520|TMEM53|79639|transmembrane protein 53##NM_024587|TMEM53|79639|transmembrane protein 53##AL832539|TMEM53|79639|transmembrane protein 53##AB264115|KIF2C|11004|kinesin family member 2C##NM_006845|KIF2C|11004|kinesin family member 2C##AK300756|KIF2C|11004|kinesin family member 2C##AK312606|KIF2C|11004|kinesin family member 2C##BC008764|KIF2C|11004|kinesin family member 2C##U63743|KIF2C|11004|kinesin family member 2C##BC014924|KIF2C|11004|kinesin family member 2C##AK290688|KIF2C|11004|kinesin family member 2C##BT006759|KIF2C|11004|kinesin family member 2C##CR450302|KIF2C|11004|kinesin family member 2C##DQ893800|KIF2C|11004|kinesin family member 2C##EU176178|KIF2C|11004|kinesin family member 2C	0.973821	CTCF.p2:-6:0.974
chr5	54467997	54468137	reg1013302.p1	9.543	+	AK074216 NM_001008397 BC029424 BX537894 BX647770 AK298545 AK307365 AY358715 CU688646	-12085	+	NM_006144 BC015739 DQ893071 DQ896326 AB528402 CR456968 M18737	-69576	+	AK312074 BC035802 NM_002104 U26174 DQ894093 EU176203 U35237	-147951	+	CU691502 AB077044 BC136572 AB077043 AB081750 AB086378 BC037547 AK095246 NM_001145734 NM_001170402 NM_152623 TSC_hg19_v1_chr5_-_54469147	923	-	NM_001190787	55075	-	BC004877 TSC_hg19_v1_chr5_-_54529425 AK290030 AK026075 NM_021147	61398	-	AK074216|GPX8|493869|glutathione peroxidase 8 (putative)##NM_001008397|GPX8|493869|glutathione peroxidase 8 (putative)##BC029424|GPX8|493869|glutathione peroxidase 8 (putative)##BX537894|GPX8|493869|glutathione peroxidase 8 (putative)##BX647770|GPX8|493869|glutathione peroxidase 8 (putative)##AK298545|GPX8|493869|glutathione peroxidase 8 (putative)##AK307365|GPX8|493869|glutathione peroxidase 8 (putative)##AY358715|GPX8|493869|glutathione peroxidase 8 (putative)##NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##AK312074|GZMK|3003|granzyme K (granzyme 3; tryptase II)##BC035802|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_002104|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U26174|GZMK|3003|granzyme K (granzyme 3; tryptase II)##DQ894093|GZMK|3003|granzyme K (granzyme 3; tryptase II)##EU176203|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U35237|GZMK|3003|granzyme K (granzyme 3; tryptase II)##AB077044|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##BC136572|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AB077043|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AB081750|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AB086378|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##BC037547|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AK095246|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##NM_001145734|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##NM_001170402|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##NM_152623|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##NM_001190787|IDAS|345643|Idas protein##BC004877|CCNO|10309|cyclin O##AK026075|CCNO|10309|cyclin O##NM_021147|CCNO|10309|cyclin O	0.999484	CTCF.p2:-8:0.999
chr8	101156308	101156431	reg1014300.p1	9.543	+	BC092411 NM_015668 TSC_hg19_v1_chr8_-_101118447	-37945	-	AY009106 BC036665 AK292559 TSC_hg19_v1_chr8_-_101118229 BC047060	-38150	-	NM_004374	-250128	-	BC090892 NM_001029860	1693	-	BC018157 NM_005034 TSC_hg19_v1_chr8_+_101162863 BC000806 Z47727	6508	+	TSC_hg19_v1_chr8_+_101170231 AK057482 NM_172218 BC055091	13894	+	BC092411|RGS22|26166|regulator of G-protein signaling 22##NM_015668|RGS22|26166|regulator of G-protein signaling 22##AY009106|RGS22|26166|regulator of G-protein signaling 22##BC036665|RGS22|26166|regulator of G-protein signaling 22##AK292559|RGS22|26166|regulator of G-protein signaling 22##BC047060|RGS22|26166|regulator of G-protein signaling 22##NM_004374|COX6C|1345|cytochrome c oxidase subunit VIc##BC090892|FBXO43|286151|F-box protein 43##NM_001029860|FBXO43|286151|F-box protein 43##BC018157|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##NM_005034|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##BC000806|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##Z47727|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##AK057482|SPAG1|6674|sperm associated antigen 1##NM_172218|SPAG1|6674|sperm associated antigen 1##BC055091|SPAG1|6674|sperm associated antigen 1	0.102275	
chr11	59030855	59030980	reg1011581.p1	9.542	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	-50510	-	TSC_hg19_v1_chr11_+_58940008 AB023154 AB385405	-90888	+	TSC_hg19_v1_chr11_+_58939648 NM_015177	-91232	+	BC140917 NM_001004729	100990	+	NM_001001954 BC136991	159519	-	BC137060 BC137061 NM_001004728	179711	+	BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1##AB023154|DTX4|23220|deltex homolog 4 (Drosophila)##NM_015177|DTX4|23220|deltex homolog 4 (Drosophila)##BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001001954|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC136991|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC137060|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1##BC137061|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1##NM_001004728|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1	0.154583	
chr9	35826112	35826231	reg1004268.p1	9.542	+	TSC_hg19_v1_chr9_-_35815040 NM_032593	-11116	-	TSC_hg19_v1_chr9_-_35815018 AK222582 AF356515 AY033094 AF356875 BC047737 AF085236	-11159	-	DQ890798 EU176503 BC019247 AK302313 NM_001039592 NM_172312 S83157 U12978	-13971	-	BC146808 BX648702 NM_001012446	2564	-	TSC_hg19_v1_chr9_+_35829262 NM_016446 BC043384 NM_001042589 AF188239	3072	+	TSC_hg19_v1_chr9_+_35829375 BC064951 NM_001042590 BC082765	3307	+	NM_032593|HINT2|84681|histidine triad nucleotide binding protein 2##AK222582|HINT2|84681|histidine triad nucleotide binding protein 2##AF356515|HINT2|84681|histidine triad nucleotide binding protein 2##AY033094|HINT2|84681|histidine triad nucleotide binding protein 2##AF356875|HINT2|84681|histidine triad nucleotide binding protein 2##BC047737|HINT2|84681|histidine triad nucleotide binding protein 2##AF085236|HINT2|84681|histidine triad nucleotide binding protein 2##DQ890798|SPAG8|26206|sperm associated antigen 8##EU176503|SPAG8|26206|sperm associated antigen 8##BC019247|SPAG8|26206|sperm associated antigen 8##AK302313|SPAG8|26206|sperm associated antigen 8##NM_001039592|SPAG8|26206|sperm associated antigen 8##NM_172312|SPAG8|26206|sperm associated antigen 8##S83157|SPAG8|26206|sperm associated antigen 8##U12978|SPAG8|26206|sperm associated antigen 8##BC146808|C9orf128|392307|chromosome 9 open reading frame 128##BX648702|C9orf128|392307|chromosome 9 open reading frame 128##NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128##NM_016446|TMEM8B|51754|transmembrane protein 8B##BC043384|TMEM8B|51754|transmembrane protein 8B##NM_001042589|TMEM8B|51754|transmembrane protein 8B##AF188239|TMEM8B|51754|transmembrane protein 8B##BC064951|TMEM8B|51754|transmembrane protein 8B##NM_001042590|TMEM8B|51754|transmembrane protein 8B##BC082765|TMEM8B|51754|transmembrane protein 8B	0.992719	CTCF.p2:-11:0.993
chrUn_gl000217	8828	8963	reg1012017.p1	9.542	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.99859	CTCF.p2:-9:0.999
chr1	234622832	234622964	reg1011061.p1	9.541	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	-8038	-	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	-113526	+	TSC_hg19_v1_chr1_+_234350005 BC037878	-272892	+	TSC_hg19_v1_chr1_-_234743489 BC020516	120628	-	TSC_hg19_v1_chr1_-_234743841 AK299768	120933	-	TSC_hg19_v1_chr1_-_234743861 AK309579	120960	-	NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##BC037878|SLC35F3|148641|solute carrier family 35, member F3##BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2	0.067908	
chr3	172059385	172059517	reg1014436.p1	9.541	+	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-301114	+	TSC_hg19_v1_chr3_+_171757442 AY358367	-301993	+	TSC_hg19_v1_chr3_+_171757437 AK127826	-302017	+	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	106772	-	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	181727	-	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	369439	-	AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AY358367|FNDC3B|64778|fibronectin type III domain containing 3B##AK127826|FNDC3B|64778|fibronectin type III domain containing 3B##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1	0.999564	CTCF.p2:14:1.000
chr5	142035375	142035487	reg1013488.p1	9.541	+	L01487 BC032697 NM_001144892	-34529	-	S67291 S67292 S67294 AB528663 X65778 X65779 M13361 NM_033137 X51943	-41723	-	TSC_hg19_v1_chr5_-_141704587 AK096464 NM_001127496 NM_030964	-330797	-	M60516 NM_000800	30188	-	M74028 NM_033136 AK312301	30594	-	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	42140	-	L01487|FGF1|2246|fibroblast growth factor 1 (acidic)##BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)##S67291|FGF1|2246|fibroblast growth factor 1 (acidic)##S67292|FGF1|2246|fibroblast growth factor 1 (acidic)##S67294|FGF1|2246|fibroblast growth factor 1 (acidic)##X65778|FGF1|2246|fibroblast growth factor 1 (acidic)##X65779|FGF1|2246|fibroblast growth factor 1 (acidic)##M13361|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)##X51943|FGF1|2246|fibroblast growth factor 1 (acidic)##AK096464|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_001127496|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_030964|SPRY4|81848|sprouty homolog 4 (Drosophila)##M60516|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)##M74028|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033136|FGF1|2246|fibroblast growth factor 1 (acidic)##AK312301|FGF1|2246|fibroblast growth factor 1 (acidic)##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)	0.997101	CTCF.p2:0:0.997
chr15	96465831	96465962	reg1013633.p1	9.540	+	TSC_hg19_v1_chr15_-_95870310 BC040875	-595577	-	NM_001159644 BC025708 BC111024 AK002037	-1566587	+	NM_001159643 NM_018349 AY656717 BC131527	-1624435	+	BC106083 NM_001145155 FM208183	403265	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	408081	+	AK316086 NM_001145156	409897	+	BC040875|LOC400456|400456|uncharacterized LOC400456##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.130585	
chr16	4250351	4250460	reg1012966.p2	9.540	+	AJ133123 NM_001116 TSC_hg19_v1_chr16_-_4166252	-84175	-	BC151207 AB011092 BC151229 TSC_hg19_v1_chr16_-_4166045	-84371	-	BC136657 BC136658 TSC_hg19_v1_chr16_-_4165831	-84586	-	AL831973 AL832361 BX647476 AK056588 NM_001098814	41661	-	TSC_hg19_v1_chr16_-_4303791 AK094828	53376	-	X57435 DQ893617 DQ895293 CR541726 CU679751 AB464303 TSC_hg19_v1_chr16_-_4322885 BC010576	72423	-	AJ133123|ADCY9|115|adenylate cyclase 9##NM_001116|ADCY9|115|adenylate cyclase 9##BC151207|ADCY9|115|adenylate cyclase 9##AB011092|ADCY9|115|adenylate cyclase 9##BC151229|ADCY9|115|adenylate cyclase 9##BC136657|ADCY9|115|adenylate cyclase 9##BC136658|ADCY9|115|adenylate cyclase 9##AL831973|SRL|6345|sarcalumenin##AL832361|SRL|6345|sarcalumenin##BX647476|SRL|6345|sarcalumenin##AK056588|SRL|6345|sarcalumenin##NM_001098814|SRL|6345|sarcalumenin##AK094828|LOC100507501|100507501|uncharacterized LOC100507501##X57435|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ893617|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ895293|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##CR541726|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##BC010576|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	0.96049	CTCF.p2:5:0.960
chr19	41055202	41055330	reg1012648.p1	9.539	+	TSC_hg19_v1_chr19_+_41036433 AK309418	-18835	+	TSC_hg19_v1_chr19_+_41036379 AF311856 NM_025213	-18886	+	AF082075 AF311855 NM_020971	-82179	+	TSC_hg19_v1_chr19_+_41082760 NM_138392 AF258553 AK075057 AK300819	27483	+	TSC_hg19_v1_chr19_+_41082789 BC022855	27522	+	AK312748 TSC_hg19_v1_chr19_+_41082792	27526	+	AK309418|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AF311856|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_025213|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AF082075|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AF311855|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_020971|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_138392|SHKBP1|92799|SH3KBP1 binding protein 1##AF258553|SHKBP1|92799|SH3KBP1 binding protein 1##AK075057|SHKBP1|92799|SH3KBP1 binding protein 1##AK300819|SHKBP1|92799|SH3KBP1 binding protein 1##BC022855|SHKBP1|92799|SH3KBP1 binding protein 1##AK312748|SHKBP1|92799|SH3KBP1 binding protein 1	0.267376	CTCF.p2:25:0.267
chr21	19275462	19275598	reg1014793.p1	9.539	+	TSC_hg19_v1_chr21_-_19191674 AF239726 AK023825 AK225123 AK314471 CR749496 NM_001100420 NM_001100421 NM_017447	-83850	-	TSC_hg19_v1_chr21_-_18985237 NM_001130914 NM_006806	-290263	-	TSC_hg19_v1_chr21_-_18985216 AK289408	-290326	-	AF523314 AF523315 NM_001204175 NM_001204176 NM_001204177 NM_001204178 AF523313	14126	+	TSC_hg19_v1_chr21_+_19617149 AF257472 NM_024944 AY358608 BC009418	341632	+	AK296009 NM_001204174	342661	+	AF239726|C21orf91|54149|chromosome 21 open reading frame 91##AK023825|C21orf91|54149|chromosome 21 open reading frame 91##AK225123|C21orf91|54149|chromosome 21 open reading frame 91##AK314471|C21orf91|54149|chromosome 21 open reading frame 91##CR749496|C21orf91|54149|chromosome 21 open reading frame 91##NM_001100420|C21orf91|54149|chromosome 21 open reading frame 91##NM_001100421|C21orf91|54149|chromosome 21 open reading frame 91##NM_017447|C21orf91|54149|chromosome 21 open reading frame 91##NM_001130914|BTG3|10950|BTG family, member 3##NM_006806|BTG3|10950|BTG family, member 3##AK289408|BTG3|10950|BTG family, member 3##AF523314|CHODL|140578|chondrolectin##AF523315|CHODL|140578|chondrolectin##NM_001204175|CHODL|140578|chondrolectin##NM_001204176|CHODL|140578|chondrolectin##NM_001204177|CHODL|140578|chondrolectin##NM_001204178|CHODL|140578|chondrolectin##AF523313|CHODL|140578|chondrolectin##AF257472|CHODL|140578|chondrolectin##NM_024944|CHODL|140578|chondrolectin##AY358608|CHODL|140578|chondrolectin##BC009418|CHODL|140578|chondrolectin##AK296009|CHODL|140578|chondrolectin##NM_001204174|CHODL|140578|chondrolectin	0.999726	CTCF.p2:10:1.000
chr6	114316135	114316261	reg1012447.p1	9.539	+	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-23862	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	-23926	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	-137464	+	AF503292 NM_153612 BC093911 BC093913	67826	-	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	2065684	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	2105811	+	BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	0.60782	CTCF.p2:43:0.608
chr7	94065453	94065560	reg1012839.p2	9.539	+	TSC_hg19_v1_chr7_+_94024206 AK297786 AK223175 AK300194 Z74616 AK226074 BC042586 BC054498 Y00724 CU691094 AB384984	-41235	+	J03464 NM_000089 X02488	-41634	+	BT009853 DQ894078 BC000899 TSC_hg19_v1_chr7_-_93633668 CR749267 AF007551 AK313984 BC012595 NM_005868	-431892	-	TSC_hg19_v1_chr7_+_94139172 BC029543 NM_022900 BC063284 AF397424	73616	+	AK123866 TSC_hg19_v1_chr7_+_94139376 AK314329 BC050313 AF355594	73873	+	AB117974 TSC_hg19_v1_chr7_-_94285409 AF516515 CU692388 DQ894063 EU176189	219887	-	AK297786|COL1A2|1278|collagen, type I, alpha 2##AK223175|COL1A2|1278|collagen, type I, alpha 2##AK300194|COL1A2|1278|collagen, type I, alpha 2##Z74616|COL1A2|1278|collagen, type I, alpha 2##AK226074|COL1A2|1278|collagen, type I, alpha 2##BC042586|COL1A2|1278|collagen, type I, alpha 2##BC054498|COL1A2|1278|collagen, type I, alpha 2##Y00724|COL1A2|1278|collagen, type I, alpha 2##J03464|COL1A2|1278|collagen, type I, alpha 2##NM_000089|COL1A2|1278|collagen, type I, alpha 2##X02488|COL1A2|1278|collagen, type I, alpha 2##BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC029543|CASD1|64921|CAS1 domain containing 1##NM_022900|CASD1|64921|CAS1 domain containing 1##BC063284|CASD1|64921|CAS1 domain containing 1##AF397424|CASD1|64921|CAS1 domain containing 1##AK123866|CASD1|64921|CAS1 domain containing 1##AK314329|CASD1|64921|CAS1 domain containing 1##BC050313|CASD1|64921|CAS1 domain containing 1##AF355594|CASD1|64921|CAS1 domain containing 1##AB117974|SGCE|8910|sarcoglycan, epsilon##AF516515|SGCE|8910|sarcoglycan, epsilon##DQ894063|SGCE|8910|sarcoglycan, epsilon##EU176189|SGCE|8910|sarcoglycan, epsilon	0.676159	CTCF.p2:5:0.676
chr1	36554327	36554469	reg1012338.p1	9.538	+	TSC_hg19_v1_chr1_+_36549714 BC035620 AK313610	-4675	+	AF054910 NM_014466 TSC_hg19_v1_chr1_+_36549694	-4712	+	TSC_hg19_v1_chr1_+_36396730 BC066888 NM_024852 NM_177422 AK292870 BC025769 AK022827	-157598	+	NM_017825 AF212236 TSC_hg19_v1_chr1_+_36554492 AJ427295 AK000453 AK295283 BC014169 AK316349 AK223037 CR457237	80	+	AK074129 BC096295 BC096296 BC096297 BC099645 NM_005202	11451	-	AJ224335 TSC_hg19_v1_chr1_-_36615058 AY007139	60638	-	BC035620|TEKT2|27285|tektin 2 (testicular)##AK313610|TEKT2|27285|tektin 2 (testicular)##AF054910|TEKT2|27285|tektin 2 (testicular)##NM_014466|TEKT2|27285|tektin 2 (testicular)##BC066888|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3##NM_024852|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3##NM_177422|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3##AK292870|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3##BC025769|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3##AK022827|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3##NM_017825|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AF212236|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AJ427295|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK000453|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK295283|ADPRHL2|54936|ADP-ribosylhydrolase like 2##BC014169|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK316349|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK223037|ADPRHL2|54936|ADP-ribosylhydrolase like 2##CR457237|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK074129|COL8A2|1296|collagen, type VIII, alpha 2##BC096295|COL8A2|1296|collagen, type VIII, alpha 2##BC096296|COL8A2|1296|collagen, type VIII, alpha 2##BC096297|COL8A2|1296|collagen, type VIII, alpha 2##BC099645|COL8A2|1296|collagen, type VIII, alpha 2##NM_005202|COL8A2|1296|collagen, type VIII, alpha 2##AJ224335|TRAPPC3|27095|trafficking protein particle complex 3##AY007139|TRAPPC3|27095|trafficking protein particle complex 3	0.0	
chr15	68545387	68545515	reg1014044.p1	9.538	+	CR457244 DQ891480 EU176598 BC013130 BC010849 TSC_hg19_v1_chr15_-_68522011 AK291175 AK293155 AK000568 AK027604 NM_017882	-23445	-	TSC_hg19_v1_chr15_-_68498423 BX640817 NM_001031733 NM_033429	-47035	-	TSC_hg19_v1_chr15_-_68497633 BX640702 BC009516 AK092628 AK296804 AX747637	-47814	-	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	24642	+	TSC_hg19_v1_chr15_+_68570434 AK290167	24973	+	TSC_hg19_v1_chr15_-_68724505 AF109681 AF137378 NM_001004439 AK292445 AK304778 AK095863	179047	-	CR457244|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##DQ891480|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##EU176598|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC013130|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC010849|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK291175|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK293155|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK000568|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK027604|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##NM_017882|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BX640817|CALML4|91860|calmodulin-like 4##NM_001031733|CALML4|91860|calmodulin-like 4##NM_033429|CALML4|91860|calmodulin-like 4##BX640702|CALML4|91860|calmodulin-like 4##BC009516|CALML4|91860|calmodulin-like 4##AK092628|CALML4|91860|calmodulin-like 4##AK296804|CALML4|91860|calmodulin-like 4##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)##AF109681|ITGA11|22801|integrin, alpha 11##AF137378|ITGA11|22801|integrin, alpha 11##NM_001004439|ITGA11|22801|integrin, alpha 11##AK292445|ITGA11|22801|integrin, alpha 11##AK304778|ITGA11|22801|integrin, alpha 11##AK095863|ITGA11|22801|integrin, alpha 11	0.275824	CTCF.p2:-6:0.276
chr21	39705927	39706059	reg1013134.p2	9.538	+	NM_170737	-61565	+	D87291 NM_170736 AK292812	-77064	+	BC013327 NM_002243	-77330	+	AB489170 AM392572 CU691828 EU446470 AK304662 AK303518 BC040168 AK300395 NM_001136155 NM_182918	164372	-	M21535 NM_001243429	250852	-	TSC_hg19_v1_chr21_-_40032563 AK309469 NM_001243428	326583	-	NM_170737|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##M21535|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243429|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK309469|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243428|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	0.0	
chr2	238683503	238683618	reg1013614.p1	9.538	+	TSC_hg19_v1_chr2_+_238601052 EU832771 EU832772 GQ129315 GQ129316	-82485	+	TSC_hg19_v1_chr2_+_238600975 AJ223075 BC001385 AK298270 U69609 BC108913 BC108914 AK307485	-82617	+	TSC_hg19_v1_chr2_+_238600798 BC018883 BC019335 NM_001137551 NM_001137552 NM_001137553 NM_004735	-82753	+	NM_001080504 TSC_hg19_v1_chr2_+_238707424 BX648107	23860	+	NM_005855 TSC_hg19_v1_chr2_+_238768265 AJ001014 BC000548 DQ891905 DQ895091 AY265457 CR542032 CR542044	84692	+	NM_080678 TSC_hg19_v1_chr2_+_238875655 AK002119 AK293334 AK297502 AK303094	192064	+	EU832771|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##EU832772|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129315|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129316|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AJ223075|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC001385|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK298270|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##U69609|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108913|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108914|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK307485|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC018883|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC019335|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137551|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137552|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137553|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_004735|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001080504|RBM44|375316|RNA binding motif protein 44##BX648107|RBM44|375316|RNA binding motif protein 44##NM_005855|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##AJ001014|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##BC000548|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##DQ891905|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##DQ895091|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##AY265457|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##CR542032|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##CR542044|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##NM_080678|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK293334|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK297502|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK303094|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)	0.86027	CTCF.p2:8:0.860
chr5	110399578	110399684	reg1012883.p1	9.538	+	TSC_hg19_v1_chr5_+_110074741 AK300123 BC017169 NM_138773 M74089 AK290217 AB529063	-324851	+	TSC_hg19_v1_chr5_+_110074720 AK091427	-324908	+	AK296542 BC042563 BX648527 NM_001039763	-337224	-	AY037115 NM_033035	7758	+	AF385437 NM_139281 BC133025 BC136517 AK095312 TSC_hg19_v1_chr5_+_110428045 AL832494	28328	+	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	160318	+	AK300123|SLC25A46|91137|solute carrier family 25, member 46##BC017169|SLC25A46|91137|solute carrier family 25, member 46##NM_138773|SLC25A46|91137|solute carrier family 25, member 46##M74089|SLC25A46|91137|solute carrier family 25, member 46##AK290217|SLC25A46|91137|solute carrier family 25, member 46##AK091427|SLC25A46|91137|solute carrier family 25, member 46##AK296542|TMEM232|642987|transmembrane protein 232##BC042563|TMEM232|642987|transmembrane protein 232##BX648527|TMEM232|642987|transmembrane protein 232##NM_001039763|TMEM232|642987|transmembrane protein 232##AY037115|TSLP|85480|thymic stromal lymphopoietin##NM_033035|TSLP|85480|thymic stromal lymphopoietin##AF385437|WDR36|134430|WD repeat domain 36##NM_139281|WDR36|134430|WD repeat domain 36##BC133025|WDR36|134430|WD repeat domain 36##BC136517|WDR36|134430|WD repeat domain 36##AK095312|WDR36|134430|WD repeat domain 36##AL832494|WDR36|134430|WD repeat domain 36##L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV	0.072052	
chr5	176928076	176928211	reg1015228.p1	9.537	+	AK096826 BC067806 NM_005451 NM_203352 NM_213636 TSC_hg19_v1_chr5_-_176924603	-3540	-	TSC_hg19_v1_chr5_-_176924559 AF345904 AF345905 AF345906 BC014521 AF265209 BC001093 BC084575	-3570	-	TSC_hg19_v1_chr5_-_176900653 NM_004395	-27470	-	BC004867 TSC_hg19_v1_chr5_-_176935979	7785	-	AB528017 TSC_hg19_v1_chr5_-_176936579	8429	-	TSC_hg19_v1_chr5_-_176936852 AK026223	8701	-	AK096826|PDLIM7|9260|PDZ and LIM domain 7 (enigma)##BC067806|PDLIM7|9260|PDZ and LIM domain 7 (enigma)##NM_005451|PDLIM7|9260|PDZ and LIM domain 7 (enigma)##NM_203352|PDLIM7|9260|PDZ and LIM domain 7 (enigma)##NM_213636|PDLIM7|9260|PDZ and LIM domain 7 (enigma)##AF345904|PDLIM7|9260|PDZ and LIM domain 7 (enigma)##AF345905|PDLIM7|9260|PDZ and LIM domain 7 (enigma)##AF345906|PDLIM7|9260|PDZ and LIM domain 7 (enigma)##BC014521|PDLIM7|9260|PDZ and LIM domain 7 (enigma)##AF265209|PDLIM7|9260|PDZ and LIM domain 7 (enigma)##BC001093|PDLIM7|9260|PDZ and LIM domain 7 (enigma)##BC084575|PDLIM7|9260|PDZ and LIM domain 7 (enigma)##NM_004395|DBN1|1627|drebrin 1##BC004867|DOK3|79930|docking protein 3##AK026223|DOK3|79930|docking protein 3	0.999895	CTCF.p2:4:1.000
chr11	76899501	76899622	reg1013565.p1	9.536	+	TSC_hg19_v1_chr11_+_76883833 BC023212	-15713	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	-60233	+	CU686775 BC069115 BC069365 NM_006189	-85677	+	AY313782 AY326450 NM_182833	98901	-	TSC_hg19_v1_chr11_-_77122998 AK296006 AK055228	223438	-	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	285271	-	BC023212|MYO7A|4647|myosin VIIA##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA##BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein##AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AK296006|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK055228|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	0.997695	CTCF.p2:14:0.998
chr15	26179201	26179304	reg1011917.p2	9.536	+	AB051358 TSC_hg19_v1_chr15_-_26108932	-70352	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	-70899	-	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	-495074	-	AK295167 NM_001191321 TSC_hg19_v1_chr15_-_26874238 BC038837	695028	-	AK302822 NM_001191320	782659	-	AB529097 DQ891086 EU176555 TSC_hg19_v1_chr15_-_27018110	838857	-	AB051358|ATP10A|57194|ATPase, class V, type 10A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##AK302822|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191320|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##DQ891086|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##EU176555|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	0.592553	CTCF.p2:13:0.593
chr6	148785987	148786140	reg1013966.p1	9.535	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-121872	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-122073	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	-122300	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	282146	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	853040	+	AK315038 NM_015093 AK307650	853378	+	AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##NM_005715|UST|10090|uronyl-2-sulfotransferase##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2	0.998972	CTCF.p2:7:0.999
chr1	118694099	118694235	reg1014598.p1	9.534	+	TSC_hg19_v1_chr1_+_118472364 NM_006784 AK292438 AF083217 BC128385 BC128454 BC148244	-221789	+	BC058836 TSC_hg19_v1_chr1_+_118472357	-221814	+	AK000149 BC013324 TSC_hg19_v1_chr1_-_118472244 NM_001135589 NM_017686	-221914	-	AB527095 AK091816 AX747199 AY555274 BX648110 NM_206996	33646	-	AK127536 NM_152380	838011	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	988859	+	NM_006784|WDR3|10885|WD repeat domain 3##AK292438|WDR3|10885|WD repeat domain 3##AF083217|WDR3|10885|WD repeat domain 3##BC058836|WDR3|10885|WD repeat domain 3##AK000149|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC013324|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_001135589|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_017686|GDAP2|54834|ganglioside induced differentiation associated protein 2##AK091816|SPAG17|200162|sperm associated antigen 17##AY555274|SPAG17|200162|sperm associated antigen 17##BX648110|SPAG17|200162|sperm associated antigen 17##NM_206996|SPAG17|200162|sperm associated antigen 17##AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15	0.466564	CTCF.p2:-13:0.467
chr4	140419053	140419178	reg1010489.p1	9.534	+	AL136904 NM_031296	-44155	+	TSC_hg19_v1_chr4_-_140374867 AK097885	-44241	-	TSC_hg19_v1_chr4_-_140223626 AK023115 NM_001184987 NM_001184988 NM_001184989 NM_001184990	-195458	-	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	58318	-	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	167875	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	168019	+	AL136904|RAB33B|83452|RAB33B, member RAS oncogene family##NM_031296|RAB33B|83452|RAB33B, member RAS oncogene family##AK023115|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184987|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184988|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184989|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184990|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2	0.969622	CTCF.p2:-8:0.970
chr18	24393154	24393262	reg1011500.p1	9.533	+	AF542549 NM_198991	-172901	-	AK289870 BC063652 TSC_hg19_v1_chr18_-_24129261 NM_001136205	-263967	-	NM_001142730 TSC_hg19_v1_chr18_-_24128518	-264698	-	U63623 NM_004028	49346	-	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	52508	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	329671	-	AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1##AK289870|KCTD1|284252|potassium channel tetramerisation domain containing 1##BC063652|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001136205|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1##U63623|AQP4|361|aquaporin 4##NM_004028|AQP4|361|aquaporin 4##AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	0.317768	CTCF.p2:-10:0.305
chr22	29986026	29986139	reg1010166.p1	9.533	+	AJ001258 NM_003634	-8757	-	BC002371 BC006473 TSC_hg19_v1_chr22_-_29977083 AK290953 AK098367 AK298816 NM_001202502 AK314407	-8987	-	NM_001002878 NM_001002879 BC003615 TSC_hg19_v1_chr22_-_29949699 AK025385 AB023200 AK225752 NM_001002877 NM_003678	-36385	-	NM_000268 NM_016418 NM_181825 NM_181828 NM_181829 NM_181830 NM_181831 NM_181832 NM_181833 TSC_hg19_v1_chr22_+_29999554	13469	+	TSC_hg19_v1_chr22_+_29999565 AF369657 AF369658 AF369659 AF369660	13500	+	AK297116 TSC_hg19_v1_chr22_+_29999605	13523	+	AJ001258|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##NM_003634|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##BC002371|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##BC006473|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AK290953|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AK098367|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AK298816|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##NM_001202502|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AK314407|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##NM_001002878|THOC5|8563|THO complex 5##NM_001002879|THOC5|8563|THO complex 5##BC003615|THOC5|8563|THO complex 5##AK025385|THOC5|8563|THO complex 5##AB023200|THOC5|8563|THO complex 5##AK225752|THOC5|8563|THO complex 5##NM_001002877|THOC5|8563|THO complex 5##NM_003678|THOC5|8563|THO complex 5##NM_000268|NF2|4771|neurofibromin 2 (merlin)##NM_016418|NF2|4771|neurofibromin 2 (merlin)##NM_181825|NF2|4771|neurofibromin 2 (merlin)##NM_181828|NF2|4771|neurofibromin 2 (merlin)##NM_181829|NF2|4771|neurofibromin 2 (merlin)##NM_181830|NF2|4771|neurofibromin 2 (merlin)##NM_181831|NF2|4771|neurofibromin 2 (merlin)##NM_181832|NF2|4771|neurofibromin 2 (merlin)##NM_181833|NF2|4771|neurofibromin 2 (merlin)##AF369657|NF2|4771|neurofibromin 2 (merlin)##AF369658|NF2|4771|neurofibromin 2 (merlin)##AF369659|NF2|4771|neurofibromin 2 (merlin)##AF369660|NF2|4771|neurofibromin 2 (merlin)##AK297116|NF2|4771|neurofibromin 2 (merlin)	0.999628	CTCF.p2:-6:1.000
chr14	107119939	107120085	reg1005678.p1	9.532	+	DQ454926 GU552751 DQ523845 DQ454743 DQ454741 FJ873884 FJ873949 FJ874082 DQ454745 AY003790 EU350425 EU667608 EF407835 DQ454756 DQ454758 DQ322814 AF343367 AF343413 AF103266 AJ007443 AF103288 FJ385341 AF103034 AF103338 AF062236 JN110970 L03820 HM774324 HM774398 HM774726 HM774904 HM774928 L33041 HM775043 AF408742 AF485449 AF078936 AF485451 AF485453 AF485455 EF633815 DQ524036 DQ524153 DQ926062 HM995709 HM995710 HM995711 HM995712 HM995713 HM995863 HM995864 HM995866 DQ322813 HM996268 AJ245306 AY044149 DQ100802 DQ100910 DQ926129 AB063797 AB063898 AB063899 AF022008 AF099199 AF398961 AF471517 AF471518 AF471519 AF471520 AJ224899 AJ399811 AY554175 AY640527 DQ065678 DQ535356 DQ779565 DQ779566 FJ385288 FN563805 FN563806 FN563810 FN563812 FN563827 FN563828 HQ689733 JF806286 X77017 L48239 AY392926 AY393064 AY452138 X65898 X81752 X81753 BC073782 AF067420 TSC_hg19_v1_chr14_-_107114275 AK097071	-5903	-	S76904 AM279575 EU619960 JN110911 JN111008 HM774600 HM774602 AF103144 AF103285 AY866748 AY866803 DQ187673 DQ187733 DQ322974 DQ840851 DQ840858 DQ840864 AF006522 AF233250 AF471440 EF177980 EU835549 AB063812 AJ399808 AJ579268 DQ205169 DQ535364 DQ535448 DQ926460 Z98683 Z98702 AJ519260 AJ519262 AJ519304 AY392915 AF062171 TSC_hg19_v1_chr14_-_107099662 AK097355 AK097366 AK093636 AK097572 AX748235	-20489	-	AF460776 EF583680 DQ454729 DQ454436 HM995491 DQ454495 DQ454638 DQ454782 DQ523857 DQ454730 DQ454735 DQ454736 DQ454850 DQ454463 DQ454626 DQ454634 DQ454779 AY003758 DQ454909 AY003782 DQ454387 DQ454439 DQ454443 DQ454491 DQ454630 DQ454640 DQ454657 DQ454658 DQ454693 DQ454996 DQ523865 DQ523866 DQ523904 DQ523907 GU552723 GU552763 DQ454683 DQ454954 AY003756 AY003861 DQ454803 DQ454883 DQ454908 DQ454931 DQ454981 Z30558 Z30559 Z30575 Z30577 Z30579 Z30673 DQ454894 HM995480 DQ454567 DQ454586 DQ454595 DQ454611 DQ454623 DQ454649 DQ454661 DQ454790 DQ454858 DQ454930 DQ454940 DQ523860 M18514 AY003863 AY003854 DQ454390 DQ454444 DQ454650 DQ454684 DQ454709 DQ454717 DQ454721 DQ454733 DQ454737 DQ454855 DQ454887 DQ454933 DQ454936 DQ454963 DQ454984 DQ454994 DQ523863 DQ454447 DQ454504 DQ454539 DQ454596 DQ454609 DQ454613 DQ454619 DQ454633 DQ454656 DQ454672 DQ454720 DQ454886 DQ454942 DQ454972 DQ454977 HM116187 DQ454605 DQ454646 DQ454702 DQ454703 DQ454851 HM116123 HM116135 HM116139 HM116144 HM116147 HM116154 HM116217 AY003860 DQ454602 DQ454880 DQ454822 DQ454825 EF091925 EF175400 EF175422 EF175440 EF583671 EU667610 EU814956 GQ232848 GQ232850 GQ232880 DQ454435 EU099241 EU099155 EU099196 AY577297 AY393172 DQ523932 DQ524057 EU099215 EU099224 AM183980 AY393168 AY393171 AY393176 AY393177 AY393178 AM279541 AF103075 AF103349 AF103054 AY180386 AF103162 FJ385403 JN110682 JN110887 AF103140 FJ385332 FJ385336 FJ385376 FJ385404 FJ385416 FJ385417 FJ385421 GQ504863 L26904 AF103343 AF103091 EU620035 AF103271 EU146313 U00585 EU620063 DQ926547 AY062314 U00553 U00557 AF103164 AF103228 DQ005270 HM995488 AY671631 HM996467 AJ245067 DQ523945 DQ523951 DQ523954 DQ523969 DQ523970 DQ523977 DQ523979 DQ524002 DQ524011 DQ524015 DQ524019 DQ524040 DQ524042 DQ524043 DQ524052 DQ524055 DQ524072 DQ524087 DQ524090 DQ524092 DQ524099 DQ524100 DQ524104 DQ524108 DQ524110 DQ524124 DQ524133 AM233755 DQ926051 DQ926252 AB067262 AJ300799 AY671719 AY941873 AY944692 AY944703 AY944704 AY944722 DQ005289 DQ005293 DQ005305 EF178085 FJ385391 HM995323 HM995324 HM995327 HM995330 HM995345 HM995347 HM995388 HM995403 HM995478 HM995483 HM995484 HM995485 HM995486 HM995487 HM995498 HM995499 HM995500 HM995502 HM995534 HM995551 HM995556 HM995557 HM995559 HM995560 HM995932 HM995933 HM995957 HM995994 HM996010 HM996122 HM996155 HM996464 HM996496 AB063721 AB063723 AB063729 AB063744 AB063787 AB063920 AB066903 AB066912 AB066913 AB067270 AB067272 AB067275 AB067296 AF021963 AF035041 AF062230 AF174018 AF174072 AF174080 AF174097 AF174119 AJ006351 AJ239343 AJ244983 AJ245027 AJ413991 AJ413998 AJ413999 AJ574780 AM279612 AY345917 AY640510 AY670733 AY670744 AY670820 AY670910 AY670915 AY670930 AY670942 AY670967 AY670984 AY671004 AY671056 AY671062 AY671072 AY671075 AY671076 AY671082 AY671085 AY671088 AY671194 AY671221 AY671255 AY671326 AY671337 AY671343 AY671346 AY671353 AY671356 AY671359 AY671373 AY671376 AY671378 AY671394 AY671456 AY671457 AY671458 AY671459 AY671460 AY671463 AY671467 AY671470 AY671472 AY671473 AY671476 AY671485 AY671488 AY671493 AY671494 AY671575 AY671588 AY671589 AY671601 AY671606 AY671628 AY671645 AY671666 AY671667 AY671674 AY671692 AY671710 AY671715 AY671717 AY671759 AY866865 AY986386 AY986387 AY986388 AY986389 AY986390 DQ005263 DQ005287 DQ005288 DQ100795 DQ328873 DQ431484 DQ431485 DQ926085 DQ926130 DQ926178 DQ926219 DQ926256 DQ926258 DQ926290 DQ926310 DQ926368 DQ926395 DQ926514 DQ926572 DQ926640 DQ926644 EU794431 FJ385318 FJ456850 GU570380 GU570382 HQ378396 HQ689744 JF806450 L12189 L12197 L23516 L23517 L23563 S73508 U00486 U00493 U31937 U43927 U51549 U95241 U96283 X98749 Z70613 Z70615 Z70628 Z70629 Z70651 Z70652 Z70653 Z70658 Z74672 Z74674 Z74681 Z74682 Z74683 Z74684 Z74685 Z74686 Z74687 Z74688 Z74689 Z74690 DQ926105 AY686879 AY944715 DQ535399 DQ535425 DQ535434 DQ535441 DQ535468 DQ535469 DQ535474 EF177985 EF178038 EF178125 HM996104 HM996425 HM996431 HM996435 Z14199 Z75403 AY392942 AY393076 AY393081 AY393082 Z47242 AY671167 AF062106 AF062108 AF062109 AF062126 AF062129 AF062132 AF062144 AF062166 AF062185 AF062209 AF062228 AF062252 AF062266 AY671032 AY671186 AY671196 AY671241 AY671258 AY671290 AY671296 M88500 S46247 U44791 U86525 X52111 Z11958 Z47349 Z75395 M18518 BC066594 S50735 TSC_hg19_v1_chr14_-_107083721 AK097365 X67906 X69860 X69866 AK097362 BX248300 AK125079	-36435	-	AF103081 JN110643 JN110687 GQ504895 GQ504960 HM774028 HM774358 HM774582 HM774889 X98961 AF165107 AY423163 AF485471 AF485473 AJ306675 AY423172 FN563800 EF633801 HM994977 HM994995 HM995120 HM995247 HM995290 HM995392 HM995519 HM995754 HM995991 HM996039 HM996369 AY866776 DQ322973 DQ926438 AF471404 AJ245345 AJ401162 AM279604 AY866777 DQ100932 DQ100975 DQ926053 DQ926476 GU570357 L19914 Z96976 AB067024 AB067127 AB363182 AB373619 AF231404 AF471217 AF471316 AF471319 AF471331 AF471353 AJ519231 AJ556646 AJ556650 AY640562 AY866705 AY866733 AY971141 DQ065617 DQ065721 DQ100842 DQ535272 DQ535332 DQ926279 EF633803 EF633809 EF633824 EF633825 FJ385293 FJ492933 FN563769 FN563801 FN563814 FN563817 FN563830 FN563831 L38018 Y08405 Y08406 Z96975 Z98724 AJ519258 AJ519228 AJ519314 AJ519323 AJ519243 AJ519280 AJ519310 AJ519335 AJ519268 AJ519313 X62126 TSC_hg19_v1_chr14_-_107122620	2477	-	GQ232991 EU814957 AY003867 GQ233006 AY003724 AY003757 FJ840009 GU552709 AY003791 FJ840366 JF810271 FJ840139 FJ874031 AF017464 HM774748 HM775002 HQ704029 DQ524134 DQ840815 DQ840856 AY530312 AY941926 AY986399 DQ100849 AB067106 AB363089 DQ535377 U00563 U64502 AY392909 AY393069 AY393070 AF062111 AF062168 X81739 X81750 Z14221 TSC_hg19_v1_chr14_-_107131555 AK097017 AK128476 AK130433	11377	-	AY179836 AY179838 AY179841 AY179844 AY179846 AY179847 AY179848 AY179850 AY179854 AY179855 AY179856 AY179858 AY179860 AY003797 DQ454801 EF583677 EU099154 EU099192 AY003810 DQ454853 AY003779 DQ454620 DQ523910 GU552683 AY003802 AY003865 DQ454802 DQ454808 DQ454937 GU552691 GU552774 HM773974 FJ873961 EF441761 DQ454821 AY996332 FJ840044 FJ840053 FJ840143 FJ840193 FJ840194 FJ840196 FJ840204 FJ840239 FJ873866 FJ873869 FJ873895 FJ873936 FJ874043 GQ232929 HM116184 EF583683 EF175392 EU099153 GQ232967 GU358675 EF583681 EU099116 GU358674 JF810254 EF091907 EF175405 EU667599 EF091906 EF091908 EF091909 EF091910 EF175388 EF175390 EF175395 EF175406 EF175412 EF175417 EF175418 EF175420 EF175428 EF407848 EF441755 EU099106 EU350411 EU350412 EU433866 EU433872 EU433873 EU433879 EU667594 EU667595 EU667596 EU667597 EU667598 EU814958 EU814959 EU814960 EU814963 EU814966 FJ694873 FJ694874 GQ232838 GQ232965 GU358670 GU358676 GU358678 GU358682 JF810255 JF810274 AF103216 EF175425 EF583662 EF583663 EF583664 EF583665 EF583667 EF583673 EF583674 EF583675 EF583682 EU350410 M35478 EF407834 EF566907 EF407828 EF407830 EF583660 DQ100847 AY998726 AF209884 AJ007325 EF473862 EU099204 U86786 U86795 U86797 AF308545 AF308549 AF308553 AF308554 AF308559 AF308560 AF308561 EU090245 GQ903485 GQ903489 GQ903492 EU099120 GQ903503 AJ239384 EU099100 EU099208 Z80841 AF103052 AF103307 EU099086 EU099105 EU099142 EU099250 EU099176 EU099293 HM774304 AY515008 EU099141 EU099212 JN110763 JN110845 JN110914 JN111163 L04334 L04335 L04344 FJ385405 FJ385410 FJ385424 FJ385430 FJ385431 HM774065 HM774083 HM774091 HM774102 HM774365 HM774646 HM774653 HM774656 HM774681 HM774757 HM774769 HM774771 HM774786 HM774863 HM774965 HM775047 AF103339 AY515006 DQ523992 EU099090 EU099092 EU099115 EU099162 EU099179 EU099210 EU099218 EU099282 DQ097895 EF624069 EF624074 EF624075 EF624077 EF624128 EF624129 EF624130 EF624131 EF624138 EF624140 EF624141 EF624143 EF624174 EF624175 EF624176 EF624177 EF624179 EF624180 EF624182 EF624183 EF624184 EF624185 EF624186 EF624187 EF624188 EF624189 EF624190 EF624191 EF624192 EF624193 EU099060 EU099066 EU099128 EU099129 EU099145 EU099158 EU099160 EU099161 EU099165 EU099177 EU099178 EU099180 EU099247 EU146320 EU146330 EU146331 EU146336 EU146348 EU146349 EU146350 EU146351 EU146352 EU146353 EU146354 EU146355 EU146356 EU146357 EU146359 EU146383 EU146385 EU146386 M98324 AY393263 AY393515 DQ524120 EU090241 EU099081 EU099095 EU099099 EU099103 EU099111 EU099121 EU099135 EU099136 EU099164 EU099170 EU099174 EU099189 EU099205 EU099207 EU099209 EU099220 AF306353 AJ132852 AM259138 L12098 AF035025 AY392856 AY392858 AY393000 AY393010 AY393106 AY393123 AY393128 AY393133 AY393135 AY393137 AY393138 AY393233 AY393338 AY393342 AY393350 AY393373 AY393495 AY393496 AY393501 AY393503 AY393504 AY393508 AY393513 AY393514 AY393516 AY393517 AY393518 AY393519 AY393520 AY393522 AY393523 AY393525 AY393528 AY393532 AY393535 AY393538 AY393539 AY393540 AY393541 AY393542 AY393543 AY393544 AY393545 AY393546 AY393604 AY393611 AY393682 DQ100913 EU099069 EU099072 EU099083 EU099117 EU099138 EU099167 EU099168 EU099171 EU099175 EU099188 EU099198 EU099201 EU099202 EU099211 EU099219 EU099236 HM994945 AY574947 AY093586 AY093587 DQ100805 DQ100924 JN158773 AY093585 AF035785 AF098366 AY781822 DQ100688 DQ523989 HM995306 U00502 DQ100709 DQ100908 DQ523957 DQ524013 DQ524031 DQ524041 DQ524127 HM994992 HM994994 HM994997 HM994998 HM995013 HM995114 HM995174 HM995178 HM995180 HM995227 HM995241 HM995248 HM995283 HM995304 HM995307 HM995375 HM995447 HM995450 HM995512 HM995517 HM995520 HM995558 HM995678 HM995679 HM995680 HM995681 HM995682 HM995683 HM995684 HM995685 HM995744 HM996065 HM996269 HM996387 AF004321 AB063837 AB063906 AB063914 AB067012 AB067013 AB067018 AB067022 AB067235 AB363092 AF099200 AF174076 AY781868 AY866799 AY941859 DQ065663 DQ065677 DQ065701 DQ840709 DQ926327 EF178030 FJ195540 FJ385306 FJ385381 GQ856069 GQ903493 GQ903497 GQ903502 GQ903514 Z92894 AB027437 AB063666 AB063701 AB063715 AB063720 AB063763 AB063768 AB063778 AB063780 AB063785 AB063831 AB063902 AB063903 AB063921 AB066830 AB066835 AB066837 AB066840 AB066841 AB066842 AB066843 AB066928 AB066936 AB066939 AB066942 AB066944 AB066948 AB066949 AB066953 AB067158 AB067170 AB067305 AB067309 AB067333 AB067383 AB363078 AB363086 AB363094 AB363097 AB373608 AF021950 AF021951 AF021952 AF021970 AF021992 AF035784 AF062098 AF062127 AF062189 AF062216 AF062283 AF115114 AF115115 AF115116 AF115118 AF115119 AF174042 AF174065 AF174069 AF174073 AF174096 AF174109 AF174126 AF193848 AF217789 AF408721 AF460964 AF460965 AJ239346 AJ239357 AJ239365 AJ239372 AJ239376 AJ389170 AJ389172 AJ389179 AJ389181 AJ413995 AJ414000 AJ414001 AJ414002 AJ414004 AJ414008 AJ414009 AJ414010 AJ414015 AJ414017 AJ414020 AJ414021 AJ414023 AJ414027 AJ416562 AJ555258 AJ555262 AJ555275 AM040567 AY033246 AY055485 AY059634 AY281328 AY281329 AY466503 AY485361 AY553640 AY557623 AY557624 AY557625 AY557626 AY557627 AY561708 AY577304 AY781812 AY927666 AY941846 AY941940 D16837 DQ100681 DQ100723 DQ100733 DQ100777 DQ100808 DQ100811 DQ100820 DQ100839 DQ100902 DQ100906 DQ100912 DQ100952 DQ212523 DQ490739 DQ926531 EF555585 EF624068 EF624070 EF624071 EF624072 EF624073 EF624078 EF624079 EF624132 EF624136 EF624178 EF624181 EF624194 EF624195 EU202446 EU202448 EU835547 EU835554 FJ039781 FJ039784 FJ385379 GQ903484 GQ903486 GQ903487 GQ903490 GQ903491 GQ903495 GQ903496 GQ903498 GQ903500 GQ903501 GQ903504 GQ903507 GQ903509 GQ903511 GU570264 GU570271 GU570274 HM152493 HM152496 HM152502 HM152504 HM152527 HQ378401 HQ392874 HQ689778 HQ689781 JN158782 JN159449 JN159454 L14454 L23519 S73955 U00518 U00550 U00583 U71105 U85240 U89903 X64237 X67903 Z18841 Z34906 Z34908 Z34957 Z34959 Z34960 Z34961 Z34962 Z34963 AY927663 JN158517 DQ535261 DQ535284 DQ535416 DQ535445 DQ535451 DQ535460 EF177997 EF178006 EF178014 GU570268 Z35123 M18516 AF062105 AF062117 AF062156 AF062161 AF062175 AF062193 AF062198 AF062208 AF174026 AY172957 L06923 M62723 X65889 Z14214 Z47222 Z47224 Z47227 Z47233 Z47244 Z47245 Z47246 Z47247 Z47248 Z47249 Z47250 Z47251 Z47252 Z47253 Z47254 Z47255 Z47256 Z47257 Z47258 Z47259 Z47260 Z47261 Z47262 Z47263 Z47264 Z47265 Z47266 Z47267 Z47268 Z47269 Z47270 Z47271 Z47272 Z47273 Z80837 Z80853 CU688244 L23561 M24669 M24670 TSC_hg19_v1_chr14_-_107170387 BC062336	50223	-	BC073782|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF067420|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK097366|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC066594|IGH@|3492|immunoglobulin heavy locus##AK097365|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097362|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125079|IGH@|3492|immunoglobulin heavy locus##AK097017|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130433|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF035025|IGHV1-69|28461|immunoglobulin heavy variable 1-69##BC062336|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	5.57218	CTCF.p2:9:0.535	CTCF.p2:-28:0.989	CTCF.p2:29:0.989	CTCF.p2:-48:0.535	CTCF.p2:67:0.535	CTCF.p2:-68:0.998	CTCF.p2:87:0.989
chr22	39611955	39612072	reg1014607.p1	9.532	+	DQ064603 AB528611 EU446785 CU690844 BC051773 TSC_hg19_v1_chr22_-_39548584 NM_175709 AK124408	-63446	-	TSC_hg19_v1_chr22_-_39529023 BC128418	-82966	-	NM_001166002 NM_001166003 NM_001166004 NM_181773 BC069023 CR456481	-118743	+	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	24896	-	CR541807 CU013138 CU013426 AB590092 TSC_hg19_v1_chr22_-_39639984 CR456538 X02744	28012	-	NM_002608 X02811 TSC_hg19_v1_chr22_-_39640988 M12783	28994	-	DQ064603|CBX7|23492|chromobox homolog 7##EU446785|CBX7|23492|chromobox homolog 7##BC051773|CBX7|23492|chromobox homolog 7##NM_175709|CBX7|23492|chromobox homolog 7##BC128418|CBX7|23492|chromobox homolog 7##NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR541807|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013138|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013426|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR456538|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02744|PDGFB|5155|platelet-derived growth factor beta polypeptide##NM_002608|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02811|PDGFB|5155|platelet-derived growth factor beta polypeptide##M12783|PDGFB|5155|platelet-derived growth factor beta polypeptide	0.714081	CTCF.p2:45:0.554
chr7	101054616	101054745	reg1015010.p1	9.532	+	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	-48463	+	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	-89642	-	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-159114	-	BC002778 NM_138403	217895	-	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	404529	+	M74099 NM_181552	406201	+	NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1	0.997352	CTCF.p2:-1:0.997
chr13	110761378	110761483	reg1012449.p2	9.531	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	-322522	-	AB290159 AK127806 NM_001198950	-1479861	+	AB020672 BC146791 NM_015011 AL834447	-1512916	+	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	41305	-	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	198079	-	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	198191	+	NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2	0.064566	
chr16	31107273	31107403	reg1013441.p1	9.531	+	TSC_hg19_v1_chr16_-_31106250 AK289790 AK312005 AF176924 AY466113 NM_024006 NM_206824	-1118	-	TSC_hg19_v1_chr16_-_31106093 AK129513	-1231	-	AY423044 AY521634 BC000828 TSC_hg19_v1_chr16_-_31106058 BC002911	-1268	-	NM_001122957 NM_005881 TSC_hg19_v1_chr16_+_31119706	12347	+	TSC_hg19_v1_chr16_+_31119738 BC007363 AK130145	12398	+	TSC_hg19_v1_chr16_+_31119750 BC009872	12411	+	AK289790|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##AK312005|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##AF176924|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##AY466113|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##NM_024006|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##NM_206824|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##AK129513|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##AY423044|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##AY521634|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##BC000828|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##BC002911|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##NM_001122957|BCKDK|10295|branched chain ketoacid dehydrogenase kinase##NM_005881|BCKDK|10295|branched chain ketoacid dehydrogenase kinase##BC007363|BCKDK|10295|branched chain ketoacid dehydrogenase kinase##AK130145|BCKDK|10295|branched chain ketoacid dehydrogenase kinase##BC009872|BCKDK|10295|branched chain ketoacid dehydrogenase kinase	0.773034	CTCF.p2:11:0.773
chr6	100449930	100450060	reg1015001.p1	9.530	+	AK123634 NM_001040179 NM_032503 AF347063	-7885	-	AY004253 NM_021620	-395346	+	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	-433392	-	NM_005068 U70212	461555	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	879105	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	879221	-	AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.989963	CTCF.p2:-12:0.990
chr6	137663173	137663298	reg1013033.p1	9.530	+	TSC_hg19_v1_chr6_-_137540556 NM_000416	-122677	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-122690	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	-122723	-	BC051352 AK096362 NM_175747	152290	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	525302	+	TSC_hg19_v1_chr6_-_138189314 AK124173	526115	-	NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3	0.97902	CTCF.p2:-10:0.979
chr1	150228413	150228561	reg1012264.p3	9.529	+	TSC_hg19_v1_chr1_-_150208505 AL832674 NM_001136478 NM_030920	-19995	-	AY057381 TSC_hg19_v1_chr1_-_150208461 AK092672 AX747663	-20036	-	AB528764 AM393076 AL833660 TSC_hg19_v1_chr1_-_150208332 AK303333 BC003380 AL832664 AK303392 AK223469	-20220	-	AK074765 AK315469 AB025904 NM_012113 AK308964 AY358689 AK295341 BC034412 AK290609	1746	+	CU676022 AF508787 AY113698 AY113699 AF151835 AK075295 AX775955 BC017699 TSC_hg19_v1_chr1_-_150241368 BC008732 BC001230 BC015568 AK297680 AK298876 AK027879 AK314490 AX775957 BC020590 BC009501	12817	-	TSC_hg19_v1_chr1_-_150241417 AY358951 AK300640 AK075452 AK298832 AK307358 NM_001077628 NM_001243771 NM_001243772 NM_016022	13021	-	AL832674|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##NM_001136478|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##NM_030920|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AY057381|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK092672|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AM393076|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL833660|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303333|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##BC003380|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL832664|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303392|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK223469|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK074765|CA14|23632|carbonic anhydrase XIV##AK315469|CA14|23632|carbonic anhydrase XIV##AB025904|CA14|23632|carbonic anhydrase XIV##NM_012113|CA14|23632|carbonic anhydrase XIV##AY358689|CA14|23632|carbonic anhydrase XIV##AK295341|CA14|23632|carbonic anhydrase XIV##BC034412|CA14|23632|carbonic anhydrase XIV##AK290609|CA14|23632|carbonic anhydrase XIV##AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AX775955|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AX775957|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AY358951|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK300640|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK075452|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK298832|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK307358|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##NM_001077628|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##NM_001243771|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##NM_001243772|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##NM_016022|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	0.612748	CTCF.p2:-17:0.583
chr1	166448411	166448536	reg1012348.p2	9.528	+	TSC_hg19_v1_chr1_-_166136076 BC114214	-312333	-	TSC_hg19_v1_chr1_-_166135982 AB593134	-312488	-	TSC_hg19_v1_chr1_-_166135951 NM_001017961	-312519	-	AK293946 AK299537 TSC_hg19_v1_chr1_+_166808680	360219	+	TSC_hg19_v1_chr1_+_166808734 AB040946 NM_017542 AK056711 BC131624	360272	+	AB590621 EU446601 AK290964 TSC_hg19_v1_chr1_-_166845502 BC015401 AK309250	397025	-	BC114214|FAM78B|149297|family with sequence similarity 78, member B##NM_001017961|FAM78B|149297|family with sequence similarity 78, member B##AK293946|POGK|57645|pogo transposable element with KRAB domain##AK299537|POGK|57645|pogo transposable element with KRAB domain##AB040946|POGK|57645|pogo transposable element with KRAB domain##NM_017542|POGK|57645|pogo transposable element with KRAB domain##AK056711|POGK|57645|pogo transposable element with KRAB domain##BC131624|POGK|57645|pogo transposable element with KRAB domain##EU446601|TADA1|117143|transcriptional adaptor 1##AK290964|TADA1|117143|transcriptional adaptor 1##BC015401|TADA1|117143|transcriptional adaptor 1##AK309250|TADA1|117143|transcriptional adaptor 1	0.999431	CTCF.p2:-7:0.999
chr12	108312108	108312246	reg1015267.p1	9.528	+	AY238895 NM_203436	-144016	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-157176	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	-157267	-	BC110330 AB018332 NM_014653	211310	+	NM_001142345	402261	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	420907	-	AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1	0.101681	
chr17	36736282	36736354	reg1023020.p1	9.528	+	TSC_hg19_v1_chr17_-_36729122 AK295027	-7196	-	TSC_hg19_v1_chr17_+_36584709 NM_001199417	-151613	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	-228455	+	BC029278 TSC_hg19_v1_chr17_-_36760969	24620	-	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	25878	-	TSC_hg19_v1_chr17_-_36831211 NM_001130677	94867	-	AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96	0.11571	
chr22	39939286	39939378	reg1011535.p1	9.528	+	TSC_hg19_v1_chr22_-_39928773 CR456443 BC037573 NM_194326	-10518	-	BC047711 TSC_hg19_v1_chr22_-_39928752 AK025423	-10581	-	TSC_hg19_v1_chr22_-_39928750 CU013041 CU013329	-10632	-	AF129133 AF142567 AF211189 AF393329 NM_001003406 NM_021096	27425	+	BC033895 NM_152512	350461	-	AY069959 NM_004810 TSC_hg19_v1_chr22_+_40297087 AK303332 AK303512 AF236119 AJ011736 BC025692 AF042380 AF102694	357792	+	CR456443|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC037573|RPS19BP1|91582|ribosomal protein S19 binding protein 1##NM_194326|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC047711|RPS19BP1|91582|ribosomal protein S19 binding protein 1##AK025423|RPS19BP1|91582|ribosomal protein S19 binding protein 1##CU013041|RPS19BP1|91582|ribosomal protein S19 binding protein 1##CU013329|RPS19BP1|91582|ribosomal protein S19 binding protein 1##AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##BC033895|ENTHD1|150350|ENTH domain containing 1##NM_152512|ENTHD1|150350|ENTH domain containing 1##AY069959|GRAP2|9402|GRB2-related adaptor protein 2##NM_004810|GRAP2|9402|GRB2-related adaptor protein 2##AK303332|GRAP2|9402|GRB2-related adaptor protein 2##AK303512|GRAP2|9402|GRB2-related adaptor protein 2##AF236119|GRAP2|9402|GRB2-related adaptor protein 2##AJ011736|GRAP2|9402|GRB2-related adaptor protein 2##BC025692|GRAP2|9402|GRB2-related adaptor protein 2##AF042380|GRAP2|9402|GRB2-related adaptor protein 2##AF102694|GRAP2|9402|GRB2-related adaptor protein 2	0.030444	
chr1	240618674	240618776	reg1012967.p1	9.527	+	TSC_hg19_v1_chr1_+_240255182 NM_020066	-363548	+	AF279779 NM_000740	-826353	+	TSC_hg19_v1_chr1_+_239550016 AK056349	-1068783	+	BC046632 TSC_hg19_v1_chr1_-_240775431	156684	-	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	156729	-	AF090116 AK314862 TSC_hg19_v1_chr1_-_241520451	901693	-	NM_020066|FMN2|56776|formin 2##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##BC046632|GREM2|64388|gremlin 2##AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2##AF090116|RGS7|6000|regulator of G-protein signaling 7##AK314862|RGS7|6000|regulator of G-protein signaling 7	0.798339	CTCF.p2:-15:0.787
chr6	103570999	103571111	reg1008287.p1	9.527	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	-1724150	+	BC037954 TSC_hg19_v1_chr6_+_101846686	-1724378	+	HM149340 TSC_hg19_v1_chr6_+_101841583	-1729549	+	TSC_hg19_v1_chr6_-_105307736 AK291760	1736670	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	1736707	-	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	1736733	-	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	0.841098	CTCF.p2:26:0.841
chr8	134658301	134658410	reg1012128.p1	9.527	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-74258	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-348858	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-455025	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1050439	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1066724	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	1066919	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.971824	CTCF.p2:-3:0.972
chr9	37309148	37309301	reg1012835.p2	9.527	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-188641	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-188716	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-188738	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	113482	+	BC010007 TSC_hg19_v1_chr9_-_37465267	156036	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	156171	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.452189	CTCF.p2:-6:0.452
chr4	117589476	117589598	reg1012920.p1	9.525	+	BC113075 BC012326 AK289670 AB036429 NM_022569	-1554556	-	NM_003360 U30930	-2046015	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-2069954	+	AK074617 BC030831 NM_152402	417196	-	TSC_hg19_v1_chr4_+_118954764 AY358852	1365234	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	1366038	+	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.010282	
chr6	17584516	17584654	reg1007838.p1	9.525	+	AK312362 NM_006366 TSC_hg19_v1_chr6_+_17393918 AL832154 AK295600 AK294215 AK293134 AK297538 AK308461 BC008481	-190803	+	AK055391 NM_153020 BC104808 BC104810 BC040928	-301581	+	NM_001143941	-302291	+	TSC_hg19_v1_chr6_+_17600620 NM_016255 AK296393 AK312814 AF097027 BC047881	16014	+	Z25535 AB384675 AK295644 BC052965 NM_005124 TSC_hg19_v1_chr6_-_17707139 AB210024	122317	-	AJ291578 AJ291579 BC127115 BC127116 AY014403 AY014404 TSC_hg19_v1_chr6_-_17987786	403175	-	AK312362|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##NM_006366|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AL832154|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK295600|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK294215|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK293134|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK297538|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK308461|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##BC008481|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK055391|RBM24|221662|RNA binding motif protein 24##NM_153020|RBM24|221662|RNA binding motif protein 24##BC104808|RBM24|221662|RNA binding motif protein 24##BC104810|RBM24|221662|RNA binding motif protein 24##BC040928|RBM24|221662|RNA binding motif protein 24##NM_001143941|RBM24|221662|RNA binding motif protein 24##NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1##AK296393|FAM8A1|51439|family with sequence similarity 8, member A1##AK312814|FAM8A1|51439|family with sequence similarity 8, member A1##AF097027|FAM8A1|51439|family with sequence similarity 8, member A1##BC047881|FAM8A1|51439|family with sequence similarity 8, member A1##Z25535|NUP153|9972|nucleoporin 153kDa##AK295644|NUP153|9972|nucleoporin 153kDa##BC052965|NUP153|9972|nucleoporin 153kDa##NM_005124|NUP153|9972|nucleoporin 153kDa##AB210024|NUP153|9972|nucleoporin 153kDa##AJ291578|KIF13A|63971|kinesin family member 13A##AJ291579|KIF13A|63971|kinesin family member 13A##BC127115|KIF13A|63971|kinesin family member 13A##BC127116|KIF13A|63971|kinesin family member 13A##AY014403|KIF13A|63971|kinesin family member 13A##AY014404|KIF13A|63971|kinesin family member 13A	0.914681	CTCF.p2:-5:0.915
chr1	162824164	162824272	reg1012473.p1	9.524	+	AK022929 AF145023 NM_016371 BC065246 AK290741 BC007068 AJ249179 AF098786 AY358962 BT007075 CU675533 CU688024 GQ129366 GQ129367	-63678	+	AK225063 TSC_hg19_v1_chr1_+_162602308	-221907	+	TSC_hg19_v1_chr1_+_162602235 NM_001014796 NM_006182 AK095975 AK225196 X74764 BX640899 BC052998 AK314388	-221972	+	BC040018 AK123573 NM_178550	14359	-	NM_001102445	214177	+	DQ346664 AK295540 NM_005613	214445	+	AK022929|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF145023|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##NM_016371|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC065246|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AK290741|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC007068|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AJ249179|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF098786|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AY358962|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BT007075|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129366|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129367|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AK225063|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_001014796|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_006182|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK095975|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK225196|DDR2|4921|discoidin domain receptor tyrosine kinase 2##X74764|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BX640899|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BC052998|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK314388|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BC040018|C1orf110|339512|chromosome 1 open reading frame 110##AK123573|C1orf110|339512|chromosome 1 open reading frame 110##NM_178550|C1orf110|339512|chromosome 1 open reading frame 110##NM_001102445|RGS4|5999|regulator of G-protein signaling 4##DQ346664|RGS4|5999|regulator of G-protein signaling 4##AK295540|RGS4|5999|regulator of G-protein signaling 4##NM_005613|RGS4|5999|regulator of G-protein signaling 4	0.999916	CTCF.p2:-5:1.000
chr2	128211080	128211181	reg1016601.p2	9.524	+	TSC_hg19_v1_chr2_+_128176019 BC034377	-35104	+	TSC_hg19_v1_chr2_+_128176007 NM_000312 AK298449 AK303773 AK298280 AK298454 X02750	-35128	+	AF234262 AF239798 BC136293 AF111105 NM_006609	-110392	-	BC065279 BC110536 BC110537 TSC_hg19_v1_chr2_-_128284054 AK000868 AL834178 AK296848 AK027561 AK295970 AK309006 AK056881 AK294669 NM_017969	72835	-	TSC_hg19_v1_chr2_+_128293312 NM_001080527	82214	+	NM_001161415 NM_001161416 NM_001161417 NM_005291 AK292725 BX538082 BC013202 Z94154 Y12546 BC031653	192468	+	BC034377|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##NM_000312|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298449|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK303773|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298280|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298454|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##X02750|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AF239798|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##BC136293|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##AF111105|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##NM_006609|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##BC065279|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110536|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110537|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK000868|IWS1|55677|IWS1 homolog (S. cerevisiae)##AL834178|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK296848|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK027561|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK295970|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK309006|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK056881|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK294669|IWS1|55677|IWS1 homolog (S. cerevisiae)##NM_017969|IWS1|55677|IWS1 homolog (S. cerevisiae)##NM_001080527|MYO7B|4648|myosin VIIB##NM_001161415|GPR17|2840|G protein-coupled receptor 17##NM_001161416|GPR17|2840|G protein-coupled receptor 17##NM_001161417|GPR17|2840|G protein-coupled receptor 17##NM_005291|GPR17|2840|G protein-coupled receptor 17##AK292725|GPR17|2840|G protein-coupled receptor 17##BX538082|GPR17|2840|G protein-coupled receptor 17##BC013202|GPR17|2840|G protein-coupled receptor 17##Z94154|GPR17|2840|G protein-coupled receptor 17##Y12546|GPR17|2840|G protein-coupled receptor 17##BC031653|GPR17|2840|G protein-coupled receptor 17	0.310586	CTCF.p2:5:0.311
chr22	42062740	42062902	reg1012534.p1	9.524	+	TSC_hg19_v1_chr22_+_42017319 AK293439 BC010034 BC018259 J04611 BC008343	-45475	+	AK304580 TSC_hg19_v1_chr22_+_42017312	-45509	+	TSC_hg19_v1_chr22_+_42017302 AK055786	-45521	+	TSC_hg19_v1_chr22_-_42078457 CR456531 BC095439 AK311800 D50420 NM_005008	15649	-	AK124020 TSC_hg19_v1_chr22_-_42084824 BC005358 AF155235 NM_001003796	22044	-	BC035403 NM_001142964 AK131457	23737	+	AK293439|XRCC6|2547|X-ray repair complementing defective repair in Chinese hamster cells 6##BC010034|XRCC6|2547|X-ray repair complementing defective repair in Chinese hamster cells 6##BC018259|XRCC6|2547|X-ray repair complementing defective repair in Chinese hamster cells 6##J04611|XRCC6|2547|X-ray repair complementing defective repair in Chinese hamster cells 6##BC008343|XRCC6|2547|X-ray repair complementing defective repair in Chinese hamster cells 6##AK304580|XRCC6|2547|X-ray repair complementing defective repair in Chinese hamster cells 6##AK055786|XRCC6|2547|X-ray repair complementing defective repair in Chinese hamster cells 6##CR456531|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##BC095439|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##AK311800|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##D50420|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_005008|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##BC035403|C22orf46|79640|chromosome 22 open reading frame 46##NM_001142964|C22orf46|79640|chromosome 22 open reading frame 46##AK131457|C22orf46|79640|chromosome 22 open reading frame 46	1.28994	CTCF.p2:9:0.919	CTCF.p2:-33:0.371
chr5	8756742	8756899	reg1012573.p2	9.524	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-887510	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-887561	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-887688	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	789374	-	BC095521 NM_019599	873642	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	1493164	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.977528	CTCF.p2:-17:0.978
chr7	116229189	116229302	reg1011200.p2	9.524	+	NM_001172896 TSC_hg19_v1_chr7_+_116166415 AF172085 NM_001172897 AK307501 EF649773 EF649774 AB209926	-62841	+	TSC_hg19_v1_chr7_+_116165089 Z18951 BC082246 DQ890647 DQ893827 EU176473 AB489179 AM393679 AB451284 AB451416 BT007143	-64143	+	BC009685 TSC_hg19_v1_chr7_+_116165054 BC006432 NM_001172895 AY762103	-64187	+	TSC_hg19_v1_chr7_+_116312490 EU176015 J02958 NM_000245 NM_001127500 X54559 DQ656040 BC130420 AK309532	83227	+	AK296974 TSC_hg19_v1_chr7_+_116364175	134930	+	TSC_hg19_v1_chr7_+_116395441 BC127890	166206	+	NM_001172896|CAV1|857|caveolin 1, caveolae protein, 22kDa##AF172085|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172897|CAV1|857|caveolin 1, caveolae protein, 22kDa##AK307501|CAV1|857|caveolin 1, caveolae protein, 22kDa##EF649773|CAV1|857|caveolin 1, caveolae protein, 22kDa##EF649774|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB209926|CAV1|857|caveolin 1, caveolae protein, 22kDa##Z18951|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC082246|CAV1|857|caveolin 1, caveolae protein, 22kDa##DQ890647|CAV1|857|caveolin 1, caveolae protein, 22kDa##DQ893827|CAV1|857|caveolin 1, caveolae protein, 22kDa##EU176473|CAV1|857|caveolin 1, caveolae protein, 22kDa##AM393679|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB451284|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB451416|CAV1|857|caveolin 1, caveolae protein, 22kDa##BT007143|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC009685|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC006432|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172895|CAV1|857|caveolin 1, caveolae protein, 22kDa##AY762103|CAV1|857|caveolin 1, caveolae protein, 22kDa##EU176015|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK296974|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	0.999219	CTCF.p2:8:0.999
chr10	61874667	61874790	reg1014450.p1	9.523	+	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-208404	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	-208527	-	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-405004	-	AK292927 AK092527 NM_001149	25988	-	U13616 NM_020987	274832	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	457962	-	BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##S72869|CCDC6|8030|coiled-coil domain containing 6##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.104564	
chr1	32281676	32281775	reg1011208.p1	9.522	+	BC114430 AK131447 NM_144569 AK091016 AX746730	-126	-	TSC_hg19_v1_chr1_-_32264318 AK095829	-17404	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	-17485	-	NM_001195100 NM_001195101	103533	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	122206	-	TSC_hg19_v1_chr1_-_32403992 NM_080391	122272	-	BC114430|SPOCD1|90853|SPOC domain containing 1##AK131447|SPOCD1|90853|SPOC domain containing 1##NM_144569|SPOCD1|90853|SPOC domain containing 1##AK091016|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2	0.876344	CTCF.p2:1:0.876
chr1	3369817	3369927	reg1009706.p1	9.522	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	-384096	+	NM_080431 AK058153 AK314500 BC029499	-431817	+	NM_001242672	-663643	-	TSC_hg19_v1_chr1_+_3371228 NM_014448 AK095984	1333	+	AK310408 TSC_hg19_v1_chr1_+_3388187 AK296150	18312	+	TSC_hg19_v1_chr1_-_3447976 AB011539	78120	-	NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16##NM_080431|ACTRT2|140625|actin-related protein T2##AK058153|ACTRT2|140625|actin-related protein T2##AK314500|ACTRT2|140625|actin-related protein T2##BC029499|ACTRT2|140625|actin-related protein T2##NM_001242672|TTC34|100287898|tetratricopeptide repeat domain 34##NM_014448|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK095984|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK310408|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK296150|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AB011539|MEGF6|1953|multiple EGF-like-domains 6	0.383861	CTCF.p2:-7:0.384
chr14	21508365	21508504	reg1012929.p2	9.522	+	BC044831 NM_001012264	-5491	-	BC027610 NM_173846 AY072034 AY173946 AK093070 AK098680 BC064583	-10050	+	BC093038 TSC_hg19_v1_chr14_-_21493912 AF304051 NM_016250 NM_201535 NM_201536 NM_201537	-14512	-	AK292697 NM_032572 AY170392 AJ306608 AJ306609 AJ306610 AY359097 BC112334	2031	+	BC137537 BC137538 NM_138331	17581	+	TSC_hg19_v1_chr14_+_21538418 BX248768 BC144317 AK074057 BC142692 BC151212 AK126755 NM_018071	30000	+	BC044831|RNASE13|440163|ribonuclease, RNase A family, 13 (non-active)##NM_001012264|RNASE13|440163|ribonuclease, RNase A family, 13 (non-active)##BC027610|TPPP2|122664|tubulin polymerization-promoting protein family member 2##NM_173846|TPPP2|122664|tubulin polymerization-promoting protein family member 2##AY072034|TPPP2|122664|tubulin polymerization-promoting protein family member 2##AY173946|TPPP2|122664|tubulin polymerization-promoting protein family member 2##BC064583|TPPP2|122664|tubulin polymerization-promoting protein family member 2##BC093038|NDRG2|57447|NDRG family member 2##AF304051|NDRG2|57447|NDRG family member 2##NM_016250|NDRG2|57447|NDRG family member 2##NM_201535|NDRG2|57447|NDRG family member 2##NM_201536|NDRG2|57447|NDRG family member 2##NM_201537|NDRG2|57447|NDRG family member 2##AK292697|RNASE7|84659|ribonuclease, RNase A family, 7##NM_032572|RNASE7|84659|ribonuclease, RNase A family, 7##AY170392|RNASE7|84659|ribonuclease, RNase A family, 7##AJ306608|RNASE7|84659|ribonuclease, RNase A family, 7##AJ306609|RNASE7|84659|ribonuclease, RNase A family, 7##AJ306610|RNASE7|84659|ribonuclease, RNase A family, 7##AY359097|RNASE7|84659|ribonuclease, RNase A family, 7##BC112334|RNASE7|84659|ribonuclease, RNase A family, 7##BC137537|RNASE8|122665|ribonuclease, RNase A family, 8##BC137538|RNASE8|122665|ribonuclease, RNase A family, 8##NM_138331|RNASE8|122665|ribonuclease, RNase A family, 8##BX248768|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC144317|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##AK074057|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC142692|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC151212|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##AK126755|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##NM_018071|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40	0.979156	CTCF.p2:1:0.979
chr15	64719201	64719381	reg1013585.p1	9.522	+	NM_016213 TSC_hg19_v1_chr15_+_64680041 BC012448 AK314319 AB464298 EU446746	-39255	+	AF529370 AY598324 AB463081 CU675545 BC005832 D14657 BC007101 TSC_hg19_v1_chr15_-_64673641 AK290748 BC016782 NM_001029989 NM_014736	-45656	-	TSC_hg19_v1_chr15_-_64648373 AK225960 NM_022048	-70891	-	TSC_hg19_v1_chr15_+_64752786 BC142647	33568	+	NM_015042	72327	+	AB056456 TSC_hg19_v1_chr15_+_64885153	165862	+	NM_016213|TRIP4|9325|thyroid hormone receptor interactor 4##BC012448|TRIP4|9325|thyroid hormone receptor interactor 4##AK314319|TRIP4|9325|thyroid hormone receptor interactor 4##EU446746|TRIP4|9325|thyroid hormone receptor interactor 4##AF529370|KIAA0101|9768|KIAA0101##AY598324|KIAA0101|9768|KIAA0101##BC005832|KIAA0101|9768|KIAA0101##D14657|KIAA0101|9768|KIAA0101##BC007101|KIAA0101|9768|KIAA0101##AK290748|KIAA0101|9768|KIAA0101##BC016782|KIAA0101|9768|KIAA0101##NM_001029989|KIAA0101|9768|KIAA0101##NM_014736|KIAA0101|9768|KIAA0101##AK225960|CSNK1G1|53944|casein kinase 1, gamma 1##NM_022048|CSNK1G1|53944|casein kinase 1, gamma 1##BC142647|ZNF609|23060|zinc finger protein 609##NM_015042|ZNF609|23060|zinc finger protein 609	0.544943	CTCF.p2:-34:0.545
chr6	108025753	108025871	reg1012255.p1	9.522	+	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	-214384	+	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	-245082	-	BC131628 NM_001080450	-590177	-	AK303562 AK074125 TSC_hg19_v1_chr6_-_108145518 AK093571 AX748208 NM_198081	119704	-	AF100141 CU690382 CU690568 BC001153 TSC_hg19_v1_chr6_-_108279282 AK074835	253445	-	TSC_hg19_v1_chr6_-_108279316 AJ011779	253500	-	NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AK303562|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK074125|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK093571|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_198081|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)##AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)	0.946016	CTCF.p2:-6:0.946
chr1	26924182	26924327	reg1013397.p1	9.521	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	-51896	+	TSC_hg19_v1_chr1_+_26872335 AK092955	-51931	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-67919	+	NM_006015 NM_139135 AF231056	98268	+	AB210022 AF219114 AB051293 AF265208 TSC_hg19_v1_chr1_+_27024003	99715	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	177034	+	AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.40791	CTCF.p2:-13:0.408
chr1	67610555	67610672	reg1012023.p2	9.521	+	NM_001013674	-16394	-	TSC_hg19_v1_chr1_-_67520070 AK289800 NM_015139	-90560	-	AB385301 BC093786 BC112031 AB044343 TSC_hg19_v1_chr1_-_67519828 D87449	-90837	-	AF461422 NM_144701	21555	+	NM_001559 U64198 TSC_hg19_v1_chr1_+_67773087	162468	+	AK294494 TSC_hg19_v1_chr1_+_67773565 AK316525	162950	+	NM_001013674|C1orf141|400757|chromosome 1 open reading frame 141##AK289800|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_015139|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##AF461422|IL23R|149233|interleukin 23 receptor##NM_144701|IL23R|149233|interleukin 23 receptor##NM_001559|IL12RB2|3595|interleukin 12 receptor, beta 2##U64198|IL12RB2|3595|interleukin 12 receptor, beta 2##AK294494|IL12RB2|3595|interleukin 12 receptor, beta 2##AK316525|IL12RB2|3595|interleukin 12 receptor, beta 2	0.0	
chr19	2316034	2316208	reg1010548.p2	9.521	+	NM_001101391	-7966	-	TSC_hg19_v1_chr19_+_2289998 AK091795 AX747191	-26124	+	AK127680 BC107678 NM_198532	-33944	-	BC018621 AF182293 TSC_hg19_v1_chr19_-_2328581 AK092837 AX747757 NM_016199	12468	-	BC093046 NM_001077238 NM_152988 TSC_hg19_v1_chr19_+_2328668	12529	+	AB040965 AJ420897 TSC_hg19_v1_chr19_+_2328682 AY169315 AK308973	12559	+	NM_001101391|LINGO3|645191|leucine rich repeat and Ig domain containing 3##AK127680|C19orf35|374872|chromosome 19 open reading frame 35##BC107678|C19orf35|374872|chromosome 19 open reading frame 35##NM_198532|C19orf35|374872|chromosome 19 open reading frame 35##BC018621|LSM7|51690|LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182293|LSM7|51690|LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_016199|LSM7|51690|LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC093046|SPPL2B|56928|signal peptide peptidase-like 2B##NM_001077238|SPPL2B|56928|signal peptide peptidase-like 2B##NM_152988|SPPL2B|56928|signal peptide peptidase-like 2B##AB040965|SPPL2B|56928|signal peptide peptidase-like 2B##AJ420897|SPPL2B|56928|signal peptide peptidase-like 2B##AY169315|SPPL2B|56928|signal peptide peptidase-like 2B	0.844016	CTCF.p2:21:0.844
chr19	43937141	43937252	reg1012875.p2	9.521	+	NM_001130011 AY014285 AY359077	-18146	+	AF241268 NM_031451	-44434	+	NM_020406 AF146747 AK290965 TSC_hg19_v1_chr19_+_43857837 AJ290452 AJ310433 AK225226 AM884905 BC029167 AY358932 AB237911 AB527936 CU688610 DQ892045 DQ895239 AJ305326 BT020111	-79351	+	CU691666 AY359006 BC041061 BC039167 AJ223603 AK075464 AK290905 AK314773 AF082889 NM_014400	32580	-	BC029299 NM_198850 BC070094	71839	-	TSC_hg19_v1_chr19_-_44031351 AM392804 AB463613 AK309880 BC008250 AK315346 D83198 NM_014297	94165	-	NM_001130011|TEX101|83639|testis expressed 101##AY014285|TEX101|83639|testis expressed 101##AY359077|TEX101|83639|testis expressed 101##AF241268|TEX101|83639|testis expressed 101##NM_031451|TEX101|83639|testis expressed 101##NM_020406|CD177|57126|CD177 molecule##AF146747|CD177|57126|CD177 molecule##AK290965|CD177|57126|CD177 molecule##AJ290452|CD177|57126|CD177 molecule##AJ310433|CD177|57126|CD177 molecule##AK225226|CD177|57126|CD177 molecule##AM884905|CD177|57126|CD177 molecule##BC029167|CD177|57126|CD177 molecule##AY358932|CD177|57126|CD177 molecule##AB237911|CD177|57126|CD177 molecule##DQ892045|CD177|57126|CD177 molecule##DQ895239|CD177|57126|CD177 molecule##AJ305326|CD177|57126|CD177 molecule##BT020111|CD177|57126|CD177 molecule##AY359006|LYPD3|27076|LY6/PLAUR domain containing 3##BC041061|LYPD3|27076|LY6/PLAUR domain containing 3##BC039167|LYPD3|27076|LY6/PLAUR domain containing 3##AJ223603|LYPD3|27076|LY6/PLAUR domain containing 3##AK075464|LYPD3|27076|LY6/PLAUR domain containing 3##AK290905|LYPD3|27076|LY6/PLAUR domain containing 3##AK314773|LYPD3|27076|LY6/PLAUR domain containing 3##AF082889|LYPD3|27076|LY6/PLAUR domain containing 3##NM_014400|LYPD3|27076|LY6/PLAUR domain containing 3##BC029299|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##NM_198850|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##BC070094|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##AM392804|ETHE1|23474|ethylmalonic encephalopathy 1##AK309880|ETHE1|23474|ethylmalonic encephalopathy 1##BC008250|ETHE1|23474|ethylmalonic encephalopathy 1##AK315346|ETHE1|23474|ethylmalonic encephalopathy 1##D83198|ETHE1|23474|ethylmalonic encephalopathy 1##NM_014297|ETHE1|23474|ethylmalonic encephalopathy 1	0.903601	CTCF.p2:9:0.904
chr6	138838829	138838963	reg1015234.p1	9.521	+	TSC_hg19_v1_chr6_-_138820580 AK092744 AX747703	-18280	-	AK307584 NM_001144060 TSC_hg19_v1_chr6_-_138820579	-18318	-	BC010290 TSC_hg19_v1_chr6_+_138725477 BC008205 BC093037 AF411610	-113351	+	TSC_hg19_v1_chr6_-_138893682 NM_020464	54812	-	TSC_hg19_v1_chr6_+_139013613 AK128874	174717	+	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	255894	+	AK307584|NHSL1|57224|NHS-like 1##NM_001144060|NHSL1|57224|NHS-like 1##BC010290|HEBP2|23593|heme binding protein 2##BC008205|HEBP2|23593|heme binding protein 2##BC093037|HEBP2|23593|heme binding protein 2##AF411610|HEBP2|23593|heme binding protein 2##NM_020464|NHSL1|57224|NHS-like 1##AK128874|FLJ46906|441172|uncharacterized LOC441172##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A	0.999316	CTCF.p2:-6:0.999
chr5	59457298	59457402	reg1010611.p1	9.520	+	NM_001104631	-267730	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	-392895	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	-393002	-	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	326554	-	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	326690	+	TSC_hg19_v1_chr5_-_59995928 AF490257	538566	-	NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AF490257|DEPDC1B|55789|DEP domain containing 1B	0.017837	
chr5	64254743	64254878	reg1014249.p1	9.520	+	BX647971 TSC_hg19_v1_chr5_+_64064766 NM_005869 AK225161 AK225105 AK308223 AK312954 AY358569 AF039692 BC012117	-190026	+	TSC_hg19_v1_chr5_-_64064491 AK094073 AX748442 NM_173829	-190306	-	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	-190364	-	AY692424 NM_197941 AY692422	522914	-	TSC_hg19_v1_chr5_-_64858996 AF315941 BC005400 BC008504 NM_022145	604154	-	TSC_hg19_v1_chr5_+_64859122 AK025679 AK093675 AK300022 AK298175 AK301654 NM_015342 BC015385 AB384434 CU677289 GQ129262 GQ129263 D38552	604308	+	BX647971|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##NM_005869|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225161|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225105|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK308223|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK312954|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AY358569|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AF039692|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##BC012117|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK094073|SREK1IP1|285672|SREK1-interacting protein 1##NM_173829|SREK1IP1|285672|SREK1-interacting protein 1##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1##AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AF315941|CENPK|64105|centromere protein K##BC005400|CENPK|64105|centromere protein K##BC008504|CENPK|64105|centromere protein K##NM_022145|CENPK|64105|centromere protein K##AK025679|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK300022|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK298175|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK301654|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##NM_015342|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##BC015385|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129262|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129263|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##D38552|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1	0.998629	CTCF.p2:5:0.999
chr7	103047459	103047560	reg1013412.p1	9.520	+	NM_001204453 NM_002803 TSC_hg19_v1_chr7_+_102988118 D11094 AK298821 AB075520 AK312648 AK298529 BC002589 AB527557 CU678056 EU446703	-59445	+	BC125057 BC139751 BC046351 X98260 TSC_hg19_v1_chr7_-_102985295 BC012376 BC062703 BC056682 BC032854 NM_001129887 NM_014377	-62316	-	BC014079 TSC_hg19_v1_chr7_+_102937944	-109568	+	TSC_hg19_v1_chr7_-_103086511 AF523354 AY256823 AY256824 AY256825 AK126898 NM_001167962 NM_198999 NM_206883 NM_206884 NM_206885	39058	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	582487	-	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	800922	-	NM_001204453|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##NM_002803|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##D11094|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK298821|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AB075520|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK312648|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK298529|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##BC002589|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##EU446703|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##BC125057|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC139751|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC046351|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##X98260|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC012376|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC062703|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC056682|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC032854|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_001129887|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_014377|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC014079|PMPCB|9512|peptidase (mitochondrial processing) beta##AF523354|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256823|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256824|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256825|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AK126898|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_001167962|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_198999|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206883|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206884|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206885|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5	0.210746	CTCF.p2:8:0.211
chr9	21326680	21326800	reg1012981.p1	9.520	+	BC093755 BC093757 NM_002169	-21429	-	BC104159 BC104160 BC074956 NM_002172 V00542	-86758	-	M71246 BC096732 BC098355 M11026 NM_021268 M38289	-98518	-	BX538121 BC064958 TSC_hg19_v1_chr9_-_21335388 AB037775 AL713669 BC039133 AK091715 AY172949 NM_018847	8593	-	AB590746 BC069471 BC096697 BC096710 BC096730 BC098357 NM_021002	24145	-	AB464595 CU686802 HQ258738 JN848523 BC093988 BC112002 BC069427 NM_006900	41299	-	BC093755|IFNA5|3442|interferon, alpha 5##BC093757|IFNA5|3442|interferon, alpha 5##NM_002169|IFNA5|3442|interferon, alpha 5##BC104159|IFNA14|3448|interferon, alpha 14##BC104160|IFNA14|3448|interferon, alpha 14##BC074956|IFNA14|3448|interferon, alpha 14##NM_002172|IFNA14|3448|interferon, alpha 14##V00542|IFNA14|3448|interferon, alpha 14##M71246|IFNA17|3451|interferon, alpha 17##BC096732|IFNA17|3451|interferon, alpha 17##BC098355|IFNA17|3451|interferon, alpha 17##M11026|IFNA17|3451|interferon, alpha 17##NM_021268|IFNA17|3451|interferon, alpha 17##M38289|IFNA17|3451|interferon, alpha 17##BX538121|KLHL9|55958|kelch-like 9 (Drosophila)##BC064958|KLHL9|55958|kelch-like 9 (Drosophila)##AB037775|KLHL9|55958|kelch-like 9 (Drosophila)##AL713669|KLHL9|55958|kelch-like 9 (Drosophila)##BC039133|KLHL9|55958|kelch-like 9 (Drosophila)##AK091715|KLHL9|55958|kelch-like 9 (Drosophila)##AY172949|KLHL9|55958|kelch-like 9 (Drosophila)##NM_018847|KLHL9|55958|kelch-like 9 (Drosophila)##BC069471|IFNA6|3443|interferon, alpha 6##BC096697|IFNA6|3443|interferon, alpha 6##BC096710|IFNA6|3443|interferon, alpha 6##BC096730|IFNA6|3443|interferon, alpha 6##BC098357|IFNA6|3443|interferon, alpha 6##NM_021002|IFNA6|3443|interferon, alpha 6##HQ258738|IFNA1|3439|interferon, alpha 1##BC093988|IFNA13|3447|interferon, alpha 13##BC112002|IFNA1|3439|interferon, alpha 1##BC069427|IFNA13|3447|interferon, alpha 13##NM_006900|IFNA13|3447|interferon, alpha 13	0.997598	CTCF.p2:-19:0.998
chr2	172430716	172430851	reg1014850.p1	9.518	+	TSC_hg19_v1_chr2_+_172379020 NM_001127383 NM_024843 AK128495 AK316588 AL136693 BC016900 AK291731 AK027115 AK225459 BC065290 HQ257890	-51828	+	AK301485 TSC_hg19_v1_chr2_+_172378762	-52024	+	TSC_hg19_v1_chr2_-_172374248 AB055776	-56537	-	TSC_hg19_v1_chr2_+_172543981 BX537412 AK055491 NM_001378 AK225759 BC091498 AY037160 AK308008 AK298561	113241	+	TSC_hg19_v1_chr2_+_172544264 AK096579 AK075323 AF250307 BC109375 AF134477 AK316119 BC015038	113508	+	AB527259 DQ891540 EU176607 TSC_hg19_v1_chr2_-_172750755 AK091071 BC016932 AJ496568 Y14494 AK022828 AK294638 NM_003705	320000	-	NM_001127383|CYBRD1|79901|cytochrome b reductase 1##NM_024843|CYBRD1|79901|cytochrome b reductase 1##AK128495|CYBRD1|79901|cytochrome b reductase 1##AK316588|CYBRD1|79901|cytochrome b reductase 1##AL136693|CYBRD1|79901|cytochrome b reductase 1##BC016900|CYBRD1|79901|cytochrome b reductase 1##AK291731|CYBRD1|79901|cytochrome b reductase 1##AK027115|CYBRD1|79901|cytochrome b reductase 1##AK225459|CYBRD1|79901|cytochrome b reductase 1##BC065290|CYBRD1|79901|cytochrome b reductase 1##HQ257890|CYBRD1|79901|cytochrome b reductase 1##AK301485|CYBRD1|79901|cytochrome b reductase 1##BX537412|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK055491|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##NM_001378|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK225759|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC091498|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AY037160|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK308008|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK298561|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK096579|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK075323|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF250307|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC109375|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF134477|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK316119|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC015038|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	0.312454	CTCF.p2:-10:0.312
chr1	47890156	47890291	reg1012932.p2	9.517	+	AF275722 NM_012186	-8480	+	TSC_hg19_v1_chr1_+_47799646 AF259961	-90582	+	TSC_hg19_v1_chr1_+_47799615 BC017806 AF087865 AF112216 AF110643 AK223014 AK294294 AK298502 AF070416 AK025258 AK293238 AK312693 BC014961 AB528698 DQ892213 DQ895408 DQ895409	-90671	+	AF042832 NM_004474	11465	+	NM_001194986	572338	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	798169	+	AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##BC017806|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF087865|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF112216|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF110643|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK223014|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK294294|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK298502|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF070416|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK025258|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK293238|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK312693|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##BC014961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##DQ892213|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##DQ895408|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##DQ895409|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##NM_001194986|LOC388630|388630|UPF0632 protein A##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9	0.878573	CTCF.p2:2:0.868
chr12	78623419	78623538	reg1012708.p1	9.516	+	NM_014903 AJ488201	-398346	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-1164189	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-1350695	-	AK094616 NM_001135805	634294	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	634997	+	TSC_hg19_v1_chr12_+_79258517 BX647240	635058	+	NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I##BX647240|SYT1|6857|synaptotagmin I	0.100284	
chr12	94534478	94534597	reg1014064.p1	9.516	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-463354	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-568936	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-569717	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	7967	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	318994	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	319105	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.26484	CTCF.p2:11:0.265
chr17	80512415	80512545	reg1012844.p2	9.516	+	TSC_hg19_v1_chr17_+_80477607 NM_004514	-34890	+	TSC_hg19_v1_chr17_+_80416616 BC016440 CU674220 CU677625	-95838	+	TSC_hg19_v1_chr17_+_80416583 AK297875 NM_001083608 NM_012336 NM_031968 BC000438 AK000929 AK303155 AK307351 AF128406	-95917	+	TSC_hg19_v1_chr17_-_80606321 AK297477 BC000974 AM182326 AB464355 BC007838 NM_019613	93803	-	TSC_hg19_v1_chr17_-_80656575 BC035814 U05227 AB209711 BC018039 NM_006822	144054	-	TSC_hg19_v1_chr17_+_80674622 NM_024619 AK293523 AK301958 AK315373 BC007611 AK022233 AL136631 AY360465 BC014408 AB385548 CU676977 CR533461	162126	+	NM_004514|FOXK2|3607|forkhead box K2##BC016440|NARF|26502|nuclear prelamin A recognition factor##AK297875|NARF|26502|nuclear prelamin A recognition factor##NM_001083608|NARF|26502|nuclear prelamin A recognition factor##NM_012336|NARF|26502|nuclear prelamin A recognition factor##NM_031968|NARF|26502|nuclear prelamin A recognition factor##BC000438|NARF|26502|nuclear prelamin A recognition factor##AK000929|NARF|26502|nuclear prelamin A recognition factor##AK303155|NARF|26502|nuclear prelamin A recognition factor##AF128406|NARF|26502|nuclear prelamin A recognition factor##AK297477|WDR45L|56270|WDR45-like##BC000974|WDR45L|56270|WDR45-like##AM182326|WDR45L|56270|WDR45-like##BC007838|WDR45L|56270|WDR45-like##NM_019613|WDR45L|56270|WDR45-like##BC035814|RAB40B|10966|RAB40B, member RAS oncogene family##U05227|RAB40B|10966|RAB40B, member RAS oncogene family##AB209711|RAB40B|10966|RAB40B, member RAS oncogene family##BC018039|RAB40B|10966|RAB40B, member RAS oncogene family##NM_006822|RAB40B|10966|RAB40B, member RAS oncogene family##NM_024619|FN3KRP|79672|fructosamine 3 kinase related protein##AK293523|FN3KRP|79672|fructosamine 3 kinase related protein##AK301958|FN3KRP|79672|fructosamine 3 kinase related protein##AK315373|FN3KRP|79672|fructosamine 3 kinase related protein##BC007611|FN3KRP|79672|fructosamine 3 kinase related protein##AK022233|FN3KRP|79672|fructosamine 3 kinase related protein##AL136631|FN3KRP|79672|fructosamine 3 kinase related protein##AY360465|FN3KRP|79672|fructosamine 3 kinase related protein##BC014408|FN3KRP|79672|fructosamine 3 kinase related protein##CR533461|FN3KRP|79672|fructosamine 3 kinase related protein	0.950734	CTCF.p2:4:0.951
chr18	20510185	20510333	reg1012970.p2	9.516	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	-512434	-	X95701 BC027891 NM_005257 TSC_hg19_v1_chr18_+_19749549	-760783	+	AK123079 TSC_hg19_v1_chr18_-_19749029	-761273	-	TSC_hg19_v1_chr18_+_20513319 NM_002894 U72066 AK292481	3089	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	3556	+	EF028204 NM_001100619	205467	+	HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##X95701|GATA6|2627|GATA binding protein 6##BC027891|GATA6|2627|GATA binding protein 6##NM_005257|GATA6|2627|GATA binding protein 6##AK123079|LOC100128893|100128893|uncharacterized LOC100128893##NM_002894|RBBP8|5932|retinoblastoma binding protein 8##U72066|RBBP8|5932|retinoblastoma binding protein 8##AK292481|RBBP8|5932|retinoblastoma binding protein 8##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	1.789961	CTCF.p2:-14:0.903	CTCF.p2:35:0.887
chr2	132615933	132616059	reg1012769.p1	9.516	+	BC043584 NM_214461	-56763	-	AF038169 NM_013310	-135933	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-330490	+	AK122643 NM_001508	558150	+	AY358628 BC017318 AK309849 AK075487 TSC_hg19_v1_chr2_-_133427783 AK130005 AK094501 AK123029	811707	-	NM_144586	812484	-	BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39##AY358628|LYPD1|116372|LY6/PLAUR domain containing 1##BC017318|LYPD1|116372|LY6/PLAUR domain containing 1##AK309849|LYPD1|116372|LY6/PLAUR domain containing 1##AK075487|LYPD1|116372|LY6/PLAUR domain containing 1##AK130005|LYPD1|116372|LY6/PLAUR domain containing 1##AK094501|LYPD1|116372|LY6/PLAUR domain containing 1##AK123029|LYPD1|116372|LY6/PLAUR domain containing 1##NM_144586|LYPD1|116372|LY6/PLAUR domain containing 1	0.071266	
chr2	163747363	163747483	reg1013002.p2	9.516	+	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-52176	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-52299	-	TSC_hg19_v1_chr2_+_163200633 AK312349 M81637 BC005214 AB209768 AB529141 CU675051 AK295413	-546662	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	845094	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	1677581	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	1730470	-	BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK312349|GCA|25801|grancalcin, EF-hand calcium binding protein##M81637|GCA|25801|grancalcin, EF-hand calcium binding protein##BC005214|GCA|25801|grancalcin, EF-hand calcium binding protein##AB209768|GCA|25801|grancalcin, EF-hand calcium binding protein##AK295413|GCA|25801|grancalcin, EF-hand calcium binding protein##BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14	0.999281	CTCF.p2:-14:0.999
chr7	117793729	117793858	reg1012407.p2	9.516	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-280250	-	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	-280312	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	-673755	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	30378	+	NM_019644 AK302407	70941	+	AK307139 AB028967 NM_012281	2119911	+	BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2	0.997492	CTCF.p2:10:0.997
chr1	207223351	207223478	reg1014887.p1	9.513	+	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	-17366	-	AK298394 NM_001122979 NM_001170631 NM_032029	-79458	-	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	-103653	-	TSC_hg19_v1_chr1_-_207224335 AL833081 BC137166 BC137167 NM_018566	945	-	AK292883 TSC_hg19_v1_chr1_+_207226619 NM_001018053 NM_006212 AJ005578 AF470623 AB044805 BC112103 BC112105 BC069350 BC069385 BC069583 BC069586 BC069600 BC075075 BC075076	3223	+	NM_001017365 NM_001017366	38797	+	BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116##AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##AL833081|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137166|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137167|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##NM_018566|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##AK292883|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_001018053|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_006212|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AJ005578|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AF470623|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AB044805|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112103|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112105|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069350|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069385|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069583|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069586|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069600|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075075|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075076|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_001017365|C4BPB|725|complement component 4 binding protein, beta##NM_001017366|C4BPB|725|complement component 4 binding protein, beta	0.122209	
chr3	117074541	117074656	reg1012832.p1	9.513	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-910225	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-910267	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-1732179	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	1678935	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	1679085	-	AK097667 NM_152538 AK292387	1790299	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.051304	
chr1	24961830	24961960	reg1014134.p1	9.512	+	TSC_hg19_v1_chr1_+_24882611 NM_001010980 AK124519	-79296	+	HQ317426 JN203053 NM_001251980 NM_001251982 NM_001251985 EF467309 EF431960 EF529733 AF176116 TSC_hg19_v1_chr1_+_24840858 AY906854 DQ892434 DQ895645 AF176117	-121036	+	HQ317423 HQ317445 HQ317446 NM_001251978	-127812	+	AF419855 NM_005839 TSC_hg19_v1_chr1_+_24969669	7738	+	TSC_hg19_v1_chr1_+_24969763 BC011019 BC036187	7843	+	TSC_hg19_v1_chr1_+_24969792 AK302498	7884	+	NM_001010980|C1orf130|400746|chromosome 1 open reading frame 130##AK124519|C1orf130|400746|chromosome 1 open reading frame 130##HQ317426|RCAN3|11123|RCAN family member 3##JN203053|RCAN3|11123|RCAN family member 3##NM_001251980|RCAN3|11123|RCAN family member 3##NM_001251982|RCAN3|11123|RCAN family member 3##NM_001251985|RCAN3|11123|RCAN family member 3##EF467309|RCAN3|11123|RCAN family member 3##EF431960|RCAN3|11123|RCAN family member 3##EF529733|RCAN3|11123|RCAN family member 3##AF176116|RCAN3|11123|RCAN family member 3##AY906854|RCAN3|11123|RCAN family member 3##DQ892434|RCAN3|11123|RCAN family member 3##DQ895645|RCAN3|11123|RCAN family member 3##AF176117|RCAN3|11123|RCAN family member 3##HQ317423|RCAN3|11123|RCAN family member 3##NM_001251978|RCAN3|11123|RCAN family member 3##AF419855|SRRM1|10250|serine/arginine repetitive matrix 1##NM_005839|SRRM1|10250|serine/arginine repetitive matrix 1##BC011019|SRRM1|10250|serine/arginine repetitive matrix 1##BC036187|SRRM1|10250|serine/arginine repetitive matrix 1##AK302498|SRRM1|10250|serine/arginine repetitive matrix 1	0.376363	CTCF.p2:15:0.376
chr14	50787858	50787997	reg1013884.p1	9.512	+	TSC_hg19_v1_chr14_+_50779043 BC011549 NM_001003803 NM_001003805 NM_015684 AF052186 U79253	-8886	+	TSC_hg19_v1_chr14_-_50778948 CU675259 AY757363 BC006117 AK309294 AK022680 AK292627 NM_024884	-9047	-	AB209277 TSC_hg19_v1_chr14_-_50698111 NM_006939	-89827	-	BC104977 NM_004196	74689	-	TSC_hg19_v1_chr14_-_50999306 BC036013 NM_006575 NM_198794 U77129	211383	-	NM_001127713	211872	+	BC011549|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_001003803|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_001003805|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_015684|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##AF052186|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##U79253|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##AY757363|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##BC006117|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AK309294|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AK022680|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AK292627|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##NM_024884|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AB209277|SOS2|6655|son of sevenless homolog 2 (Drosophila)##NM_006939|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC104977|CDKL1|8814|cyclin-dependent kinase-like 1 (CDC2-related kinase)##NM_004196|CDKL1|8814|cyclin-dependent kinase-like 1 (CDC2-related kinase)##BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##NM_001127713|ATL1|51062|atlastin GTPase 1	0.998414	CTCF.p2:-8:0.998
chr6	6724908	6725043	reg1013863.p1	9.511	+	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	-136025	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-404065	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-404090	-	BC039678 TSC_hg19_v1_chr6_+_6725205	186	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	382851	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	383060	+	NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1	0.839286	CTCF.p2:-30:0.839
chr8	118316463	118316605	reg1015308.p1	9.511	+	NM_001172814 NM_173851	-169198	+	AK298294 NM_001172813 NM_001172815 AL713790	-353331	+	EF560713 NM_001172811	-354023	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	216424	+	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	216508	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	807427	-	NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##EF560713|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172811|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_080651|MED30|90390|mediator complex subunit 30##BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1	0.987183	CTCF.p2:13:0.987
chr8	75257030	75257160	reg1012223.p1	9.510	+	BX537756 BC139832 BC098299 BC098314 BC099736 BC113856 BC114464 NM_020647 BC140875 BC140876	-23567	-	NM_001195797 NM_015364 BC020690 AF168121 AB590737 AB446498	-353475	+	NM_001040613 NM_017866 TSC_hg19_v1_chr8_+_74888429 BC002748	-368678	+	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	5595	+	CR749657 NM_015886	479676	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	639814	+	BX537756|JPH1|56704|junctophilin 1##BC139832|JPH1|56704|junctophilin 1##BC098299|JPH1|56704|junctophilin 1##BC098314|JPH1|56704|junctophilin 1##BC099736|JPH1|56704|junctophilin 1##BC113856|JPH1|56704|junctophilin 1##BC114464|JPH1|56704|junctophilin 1##NM_020647|JPH1|56704|junctophilin 1##BC140875|JPH1|56704|junctophilin 1##BC140876|JPH1|56704|junctophilin 1##NM_001195797|LY96|23643|lymphocyte antigen 96##NM_015364|LY96|23643|lymphocyte antigen 96##BC020690|LY96|23643|lymphocyte antigen 96##AF168121|LY96|23643|lymphocyte antigen 96##AB446498|LY96|23643|lymphocyte antigen 96##NM_001040613|TMEM70|54968|transmembrane protein 70##NM_017866|TMEM70|54968|transmembrane protein 70##BC002748|TMEM70|54968|transmembrane protein 70##AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1	0.700307	CTCF.p2:33:0.700
chr16	88924286	88924408	reg1014732.p1	9.509	+	TSC_hg19_v1_chr16_+_88923536 NM_016209 AF089106 AX771012 AK311885 BC105809 AK126779 AF161524 AK310805 AX771013 BC018024 AX771014 BC011369	-824	+	AK294390 TSC_hg19_v1_chr16_-_88923352 AK312655 BC056151 BC050684 NM_000512 BC018027	-977	-	AK308269 BX649181 AK310392 TSC_hg19_v1_chr16_-_88923340	-1059	-	AB528852 EU190484 BC130001 BC130002 NM_001080487	8694	-	AB010420 NM_175931	83259	-	AB527670 EU446890 BC047019 AK314766 AB010419 BC062624 NM_005187 TSC_hg19_v1_chr16_-_89043569	119056	-	NM_016209|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF089106|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771012|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK311885|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC105809|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK126779|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF161524|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK310805|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771013|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC018024|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771014|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC011369|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK294390|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK312655|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC056151|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC050684|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##NM_000512|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC018027|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK308269|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BX649181|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK310392|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##EU190484|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130001|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130002|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001080487|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##EU446890|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC047019|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AK314766|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010419|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC062624|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_005187|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	0.422542	CTCF.p2:-5:0.423
chr4	54357316	54357449	reg1013786.p1	9.509	+	TSC_hg19_v1_chr4_+_54292052 BC026724	-65311	+	TSC_hg19_v1_chr4_+_54243915 BC024016 BC052959 AB463043 AM392758 AY229892 AK300398 AK308145	-113423	+	TSC_hg19_v1_chr4_+_54243829 BC017724 AL136910 AY366510	-113518	+	AY358326 TSC_hg19_v1_chr4_-_54424350 BC034737	66968	-	AF237782 TSC_hg19_v1_chr4_-_54424379 AK294611	66996	-	TSC_hg19_v1_chr4_-_54424402 NM_032622	67036	-	BC026724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##BC024016|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##BC052959|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##AM392758|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##AK300398|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##AK308145|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##BC017724|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##AL136910|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##AY366510|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##AY358326|LNX1|84708|ligand of numb-protein X 1##BC034737|LNX1|84708|ligand of numb-protein X 1##AF237782|LNX1|84708|ligand of numb-protein X 1##AK294611|LNX1|84708|ligand of numb-protein X 1##NM_032622|LNX1|84708|ligand of numb-protein X 1	0.752979	CTCF.p2:-9:0.753
chr1	118253474	118253624	reg1015706.p1	9.508	+	TSC_hg19_v1_chr1_+_118148669 AK000209 BC036516 BC131726	-104870	+	TSC_hg19_v1_chr1_+_118148542 NM_017709	-104963	+	TSC_hg19_v1_chr1_+_117910083 BC052954 AK307842 NM_006699 BC063300	-343456	+	TSC_hg19_v1_chr1_-_118472186 BC013132	218633	-	AK000149 BC013324 TSC_hg19_v1_chr1_-_118472244 NM_001135589 NM_017686	218704	-	BC058836 TSC_hg19_v1_chr1_+_118472357	218804	+	AK000209|FAM46C|54855|family with sequence similarity 46, member C##BC036516|FAM46C|54855|family with sequence similarity 46, member C##BC131726|FAM46C|54855|family with sequence similarity 46, member C##NM_017709|FAM46C|54855|family with sequence similarity 46, member C##BC052954|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##AK307842|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##NM_006699|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC063300|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC013132|GDAP2|54834|ganglioside induced differentiation associated protein 2##AK000149|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC013324|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_001135589|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_017686|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC058836|WDR3|10885|WD repeat domain 3	0.999481	CTCF.p2:4:0.999
chr11	20669673	20669794	reg1012269.p1	9.508	+	NM_004211 AF085412	-48786	+	BC047226 TSC_hg19_v1_chr11_+_20409261 AK301449 AK298185 AK300591 BC037544 AB590779 EU831425 EU831518	-260473	+	NM_001145166 NM_001145167 NM_005788 TSC_hg19_v1_chr11_+_20409136 BC064831 BC019339 AK129984	-260617	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	21459	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	1544914	+	AB032435 NM_020346	1689933	+	NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##BC047226|PRMT3|10196|protein arginine methyltransferase 3##AK301449|PRMT3|10196|protein arginine methyltransferase 3##AK298185|PRMT3|10196|protein arginine methyltransferase 3##AK300591|PRMT3|10196|protein arginine methyltransferase 3##BC037544|PRMT3|10196|protein arginine methyltransferase 3##EU831425|PRMT3|10196|protein arginine methyltransferase 3##EU831518|PRMT3|10196|protein arginine methyltransferase 3##NM_001145166|PRMT3|10196|protein arginine methyltransferase 3##NM_001145167|PRMT3|10196|protein arginine methyltransferase 3##NM_005788|PRMT3|10196|protein arginine methyltransferase 3##BC064831|PRMT3|10196|protein arginine methyltransferase 3##BC019339|PRMT3|10196|protein arginine methyltransferase 3##AK129984|PRMT3|10196|protein arginine methyltransferase 3##AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	0.994669	CTCF.p2:-17:0.995
chr3	151186230	151186351	reg1015180.p1	9.508	+	AY273815 NM_178822	-9794	-	AK093069 AX747900 BC031063 BC045734 NM_001178145 NM_001178146	-27723	-	AK292096 AK303714 AK316575 TSC_hg19_v1_chr3_-_151102542 BC017898 NM_022788	-83746	-	BX647585 NM_207365 BC065724	265418	+	TSC_hg19_v1_chr3_+_151488214 BC014344	301940	+	NM_001086 L32179 BC020706 AK290628 BC032309 CU689322	345614	+	AY273815|IGSF10|285313|immunoglobulin superfamily, member 10##NM_178822|IGSF10|285313|immunoglobulin superfamily, member 10##AK093069|IGSF10|285313|immunoglobulin superfamily, member 10##BC031063|IGSF10|285313|immunoglobulin superfamily, member 10##BC045734|IGSF10|285313|immunoglobulin superfamily, member 10##NM_001178145|IGSF10|285313|immunoglobulin superfamily, member 10##NM_001178146|IGSF10|285313|immunoglobulin superfamily, member 10##AK292096|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AK303714|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AK316575|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##BC017898|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##NM_022788|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##BX647585|AADACL2|344752|arylacetamide deacetylase-like 2##NM_207365|AADACL2|344752|arylacetamide deacetylase-like 2##BC065724|AADACL2|344752|arylacetamide deacetylase-like 2##BC014344|LOC201651|201651|arylacetamide deacetylase (esterase) pseudogene##NM_001086|AADAC|13|arylacetamide deacetylase (esterase)##L32179|AADAC|13|arylacetamide deacetylase (esterase)##BC020706|AADAC|13|arylacetamide deacetylase (esterase)##AK290628|AADAC|13|arylacetamide deacetylase (esterase)##BC032309|AADAC|13|arylacetamide deacetylase (esterase)	0.978029	CTCF.p2:-7:0.978
chr12	113530607	113530732	reg1014608.p1	9.507	+	NM_004416 BC048216	-34979	+	TSC_hg19_v1_chr12_+_113416323 NM_001032731 NM_002535 NM_016817 BC010625 BC053870 BC023637 AK292906 BC069052 BC049215 AK292796 M87284 M87434 AB590925 CU690608	-114329	+	AF063613 TSC_hg19_v1_chr12_+_113376306	-154329	+	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	42743	-	AF086713 AB208935 AK294350 NM_001193520 NM_004658	43362	-	AK308987 NM_001144872	56935	+	NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)##BC048216|DTX1|1840|deltex homolog 1 (Drosophila)##NM_001032731|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_002535|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_016817|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC010625|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC053870|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC023637|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292906|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC069052|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC049215|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292796|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87284|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87434|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AF063613|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001144872|CCDC42B|387885|coiled-coil domain containing 42B	0.145487	
chr2	209331225	209331330	reg1012583.p1	9.507	+	BC036811 NM_005048 U25128 HQ257935 AY497546	-59616	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-106652	+	TSC_hg19_v1_chr2_+_209131083 AK127769	-200194	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	957477	+	BC110423 TSC_hg19_v1_chr2_+_210444185	1112893	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	1113117	+	BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##AK294181|PTH2R|5746|parathyroid hormone 2 receptor##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC110423|MAP2|4133|microtubule-associated protein 2##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2	0.980222	CTCF.p2:-4:0.980
chr11	72948079	72948208	reg1012409.p1	9.506	+	AK313942 TSC_hg19_v1_chr11_+_72929608	-18527	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	-18697	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	-18799	+	NM_176796 NM_176797 AF007891	27433	+	AF007892 AX775903 NM_176798	32795	+	BC009391 NM_004154 BC000571 AF218005 X97058 AK311529 U52464	35196	+	AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176796|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176797|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007891|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007892|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AX775903|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176798|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##BC009391|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_004154|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##BC000571|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF218005|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##X97058|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##U52464|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6	0.41721	CTCF.p2:3:0.417
chr7	100492530	100492650	reg1010144.p1	9.506	+	BC017456 BC067904 AK292467 NM_001015072	-5285	-	TSC_hg19_v1_chr7_+_100472809 BC109116	-19764	+	TSC_hg19_v1_chr7_+_100472803 BC109117	-19785	+	BC105060 BC105062 BC143469 AK291321 TSC_hg19_v1_chr7_-_100493509 BC001541 AK223443 AF334270 BC026315 BC036813 NM_000665 NM_015831	921	-	AK130455 TSC_hg19_v1_chr7_+_100612694	120103	+	NM_001164462	120313	+	BC017456|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##BC067904|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##AK292467|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##NM_001015072|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##BC109116|SRRT|51593|serrate RNA effector molecule homolog (Arabidopsis)##BC109117|SRRT|51593|serrate RNA effector molecule homolog (Arabidopsis)##BC105060|ACHE|43|acetylcholinesterase##BC105062|ACHE|43|acetylcholinesterase##BC143469|ACHE|43|acetylcholinesterase##AK291321|ACHE|43|acetylcholinesterase##BC001541|ACHE|43|acetylcholinesterase##AK223443|ACHE|43|acetylcholinesterase##AF334270|ACHE|43|acetylcholinesterase##BC026315|ACHE|43|acetylcholinesterase##BC036813|ACHE|43|acetylcholinesterase##NM_000665|ACHE|43|acetylcholinesterase##NM_015831|ACHE|43|acetylcholinesterase##NM_001164462|MUC12|10071|mucin 12, cell surface associated	0.878084	CTCF.p2:-4:0.878
chr12	101808442	101808579	reg1013072.p1	9.505	+	TSC_hg19_v1_chr12_-_101801573 AK311793 AK302911 AK299062 BC007000 BX537387 NM_001177	-6967	-	TSC_hg19_v1_chr12_+_101673904 NM_014503 AK307934 AJ006778	-134605	+	AK313788 AF536216 AY081220 NM_145913	-204511	-	AK296681 NM_002465 NM_206819 NM_206820 NM_206821 AK056587 AK292976 AK295727 AK303401 BC015187 BC030980 BC065720 TSC_hg19_v1_chr12_+_101988748 BC092418 X66276 X73114 AL831993 AL832000 AL832332 AL832350 AL832354 AL832456 BC117217 BC143495 BC143502 BC143503 BC143504 AL834249 BX649073 AB385254 AM392734 EU831907 EU832001	180286	+	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	283112	+	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	324709	-	AK311793|ARL1|400|ADP-ribosylation factor-like 1##AK302911|ARL1|400|ADP-ribosylation factor-like 1##AK299062|ARL1|400|ADP-ribosylation factor-like 1##BC007000|ARL1|400|ADP-ribosylation factor-like 1##BX537387|ARL1|400|ADP-ribosylation factor-like 1##NM_001177|ARL1|400|ADP-ribosylation factor-like 1##NM_014503|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK307934|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AJ006778|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK313788|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AF536216|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AY081220|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_145913|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AK296681|MYBPC1|4604|myosin binding protein C, slow type##NM_002465|MYBPC1|4604|myosin binding protein C, slow type##NM_206819|MYBPC1|4604|myosin binding protein C, slow type##NM_206820|MYBPC1|4604|myosin binding protein C, slow type##NM_206821|MYBPC1|4604|myosin binding protein C, slow type##AK056587|MYBPC1|4604|myosin binding protein C, slow type##AK292976|MYBPC1|4604|myosin binding protein C, slow type##AK295727|MYBPC1|4604|myosin binding protein C, slow type##AK303401|MYBPC1|4604|myosin binding protein C, slow type##BC015187|MYBPC1|4604|myosin binding protein C, slow type##BC030980|MYBPC1|4604|myosin binding protein C, slow type##BC065720|MYBPC1|4604|myosin binding protein C, slow type##BC092418|MYBPC1|4604|myosin binding protein C, slow type##X66276|MYBPC1|4604|myosin binding protein C, slow type##X73114|MYBPC1|4604|myosin binding protein C, slow type##AL831993|MYBPC1|4604|myosin binding protein C, slow type##AL832000|MYBPC1|4604|myosin binding protein C, slow type##AL832332|MYBPC1|4604|myosin binding protein C, slow type##AL832350|MYBPC1|4604|myosin binding protein C, slow type##AL832354|MYBPC1|4604|myosin binding protein C, slow type##AL832456|MYBPC1|4604|myosin binding protein C, slow type##BC117217|MYBPC1|4604|myosin binding protein C, slow type##BC143495|MYBPC1|4604|myosin binding protein C, slow type##BC143502|MYBPC1|4604|myosin binding protein C, slow type##BC143503|MYBPC1|4604|myosin binding protein C, slow type##BC143504|MYBPC1|4604|myosin binding protein C, slow type##AL834249|MYBPC1|4604|myosin binding protein C, slow type##BX649073|MYBPC1|4604|myosin binding protein C, slow type##AM392734|MYBPC1|4604|myosin binding protein C, slow type##EU831907|MYBPC1|4604|myosin binding protein C, slow type##EU832001|MYBPC1|4604|myosin binding protein C, slow type##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3	0.98248	CTCF.p2:-8:0.982
chr19	28465038	28465159	reg1013846.p1	9.505	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-180170	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-180265	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-180710	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	1238962	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	1239023	-	NM_001146339	1552392	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.016969	
chr11	86706463	86706613	reg1015059.p1	9.503	+	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	-40150	-	TSC_hg19_v1_chr11_-_86666094 AY462097	-40431	-	NM_007173 TSC_hg19_v1_chr11_+_86511583 AK316508 AK075362 AK315562 AK304301 AK304054 BC063022 AL136914 BC001278 AF015287 AF193611 AY359033	-194986	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	42440	+	AK024853 TSC_hg19_v1_chr11_+_87032449	325904	+	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	1202054	-	BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##AY462097|FZD4|8322|frizzled family receptor 4##NM_007173|PRSS23|11098|protease, serine, 23##AK075362|PRSS23|11098|protease, serine, 23##AK315562|PRSS23|11098|protease, serine, 23##AK304301|PRSS23|11098|protease, serine, 23##AK304054|PRSS23|11098|protease, serine, 23##AL136914|PRSS23|11098|protease, serine, 23##BC001278|PRSS23|11098|protease, serine, 23##AF015287|PRSS23|11098|protease, serine, 23##AF193611|PRSS23|11098|protease, serine, 23##AY359033|PRSS23|11098|protease, serine, 23##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##AK024853|TMEM135|65084|transmembrane protein 135##BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family	0.964329	CTCF.p2:9:0.964
chr11	64099414	64099541	reg1014188.p1	9.502	+	TSC_hg19_v1_chr11_+_64085676 AF124993 AF110731 BC113723 BC113725 BC143849 BC171733 AF112212 AF242525 AF231705 CR457203 HQ258129 AJ249483	-13755	+	BC110983 NM_012094 NM_181651 NM_181652 TSC_hg19_v1_chr11_+_64085600 AF197952	-13898	+	TSC_hg19_v1_chr11_-_64085009 AK312050 DQ892261 DQ895463 BC105294 BC029482 BC017172 AF161501 AF229068 NM_016404	-14456	-	TSC_hg19_v1_chr11_+_64107692 BC151218 BC151222 NM_032251 AK090436 BC140822 BC140824 BC141866	8225	+	TSC_hg19_v1_chr11_+_64120348 AK126728	20882	+	TSC_hg19_v1_chr11_+_64126642 AK223561 NM_001006944 NM_003942 AJ010119 AK292163 AK313567 BC047896 AK298507 BC028079 CU690526 AF074715	27254	+	AF124993|PRDX5|25824|peroxiredoxin 5##AF110731|PRDX5|25824|peroxiredoxin 5##BC113723|PRDX5|25824|peroxiredoxin 5##BC113725|PRDX5|25824|peroxiredoxin 5##BC143849|PRDX5|25824|peroxiredoxin 5##BC171733|PRDX5|25824|peroxiredoxin 5##AF112212|PRDX5|25824|peroxiredoxin 5##AF242525|PRDX5|25824|peroxiredoxin 5##AF231705|PRDX5|25824|peroxiredoxin 5##CR457203|PRDX5|25824|peroxiredoxin 5##HQ258129|PRDX5|25824|peroxiredoxin 5##AJ249483|PRDX5|25824|peroxiredoxin 5##BC110983|PRDX5|25824|peroxiredoxin 5##NM_012094|PRDX5|25824|peroxiredoxin 5##NM_181651|PRDX5|25824|peroxiredoxin 5##NM_181652|PRDX5|25824|peroxiredoxin 5##AF197952|PRDX5|25824|peroxiredoxin 5##AK312050|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ892261|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ895463|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC105294|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC029482|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC017172|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF161501|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF229068|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##NM_016404|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC151218|CCDC88B|283234|coiled-coil domain containing 88B##BC151222|CCDC88B|283234|coiled-coil domain containing 88B##NM_032251|CCDC88B|283234|coiled-coil domain containing 88B##AK090436|CCDC88B|283234|coiled-coil domain containing 88B##BC140822|CCDC88B|283234|coiled-coil domain containing 88B##BC140824|CCDC88B|283234|coiled-coil domain containing 88B##BC141866|CCDC88B|283234|coiled-coil domain containing 88B##AK126728|CCDC88B|283234|coiled-coil domain containing 88B##AK223561|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_001006944|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_003942|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AJ010119|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK292163|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK313567|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC047896|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK298507|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC028079|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AF074715|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4	0.864281	CTCF.p2:9:0.864
chr15	89377666	89377814	reg1015430.p1	9.502	+	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	-31054	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	-195554	+	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	-213170	+	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	61058	-	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	78820	-	BC003610 AK095908 AK222735 AK223182 AK304627 AK310357 AK312640 U58516 AY141974 TSC_hg19_v1_chr15_-_89456611 NM_001114614 NM_005928	78899	-	U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan##BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein##BC003610|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK095908|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK222735|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK223182|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK304627|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK310357|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK312640|MFGE8|4240|milk fat globule-EGF factor 8 protein##U58516|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY141974|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_001114614|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_005928|MFGE8|4240|milk fat globule-EGF factor 8 protein	0.814622	CTCF.p2:3:0.815
chr2	165871676	165871799	reg1014733.p1	9.502	+	AK293998 AK097141 NM_001199148 NM_173512	-59723	-	AK225849 BC006264 TSC_hg19_v1_chr2_-_165698685 AK294937	-173115	-	TSC_hg19_v1_chr2_-_165698334 AK002054	-173410	-	AF225986 AF225987 AK299757 TSC_hg19_v1_chr2_-_166060561 NM_001081676 NM_001081677 NM_006922 DQ993536	188840	-	AK289656 NM_001040142 DQ993531 BC029489 BC047398 BC048417	224195	+	NM_021007	278603	+	AK293998|SLC38A11|151258|solute carrier family 38, member 11##AK097141|SLC38A11|151258|solute carrier family 38, member 11##NM_001199148|SLC38A11|151258|solute carrier family 38, member 11##NM_173512|SLC38A11|151258|solute carrier family 38, member 11##AK225849|COBLL1|22837|COBL-like 1##BC006264|COBLL1|22837|COBL-like 1##AK294937|COBLL1|22837|COBL-like 1##AK002054|COBLL1|22837|COBL-like 1##AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_021007|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	0.999834	CTCF.p2:-3:1.000
chr20	42721757	42721867	reg1012439.p1	9.501	+	NM_001098798	-147277	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	-177019	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	-178325	+	AL132999 TSC_hg19_v1_chr20_-_42815818 AK304863	93981	-	BC029957 NM_020433 NM_175913	94405	-	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	117544	-	NM_001098798|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##AL132999|JPH2|57158|junctophilin 2##AK304863|JPH2|57158|junctophilin 2##BC029957|JPH2|57158|junctophilin 2##NM_020433|JPH2|57158|junctophilin 2##NM_175913|JPH2|57158|junctophilin 2##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111	0.982927	CTCF.p2:10:0.983
chr5	100381534	100381664	reg1014359.p1	9.501	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-142671	-	AF529367 TSC_hg19_v1_chr5_+_99871306	-510329	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-510526	+	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	1250509	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	1453034	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	1819931	+	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase	0.596509	CTCF.p2:5:0.597
chr1	7729650	7729785	reg1014754.p1	9.500	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-884226	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-967786	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-967835	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	101659	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	114692	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	115108	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.9364	CTCF.p2:-8:0.936
chr3	24227531	24227649	reg1013570.p1	9.500	+	TSC_hg19_v1_chr3_+_23987516 AK301925 NM_001145425	-240028	+	TSC_hg19_v1_chr3_+_23986776 NM_005126 D16815 AK313464 BC045613 BC070035	-240775	+	NM_001253380 AY347528 L25899 AB529129 BT019672 CU677095 CU687134	-268318	+	GQ456948 GQ456949 GQ869479 GQ919288 AY286469 AY286468 AY286465 AY286471 TSC_hg19_v1_chr3_-_24536294 AY286467 AY286466 AK096628 M26747 NM_000461 NM_001128176 NM_001128177 NM_001252634 X04707	308654	-	AY286470 TSC_hg19_v1_chr3_-_24536493	308887	-	TSC_hg19_v1_chr3_+_25469751 AF157483 NM_016152	1242169	+	AK301925|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001145425|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001253380|RPL15|6138|ribosomal protein L15##AY347528|RPL15|6138|ribosomal protein L15##L25899|RPL15|6138|ribosomal protein L15##BT019672|RPL15|6138|ribosomal protein L15##GQ456948|THRB|7068|thyroid hormone receptor, beta##GQ456949|THRB|7068|thyroid hormone receptor, beta##GQ869479|THRB|7068|thyroid hormone receptor, beta##GQ919288|THRB|7068|thyroid hormone receptor, beta##AY286469|THRB|7068|thyroid hormone receptor, beta##AY286468|THRB|7068|thyroid hormone receptor, beta##AY286465|THRB|7068|thyroid hormone receptor, beta##AY286471|THRB|7068|thyroid hormone receptor, beta##AY286467|THRB|7068|thyroid hormone receptor, beta##AY286466|THRB|7068|thyroid hormone receptor, beta##AK096628|THRB|7068|thyroid hormone receptor, beta##M26747|THRB|7068|thyroid hormone receptor, beta##NM_000461|THRB|7068|thyroid hormone receptor, beta##NM_001128176|THRB|7068|thyroid hormone receptor, beta##NM_001128177|THRB|7068|thyroid hormone receptor, beta##NM_001252634|THRB|7068|thyroid hormone receptor, beta##X04707|THRB|7068|thyroid hormone receptor, beta##AY286470|THRB|7068|thyroid hormone receptor, beta##AF157483|RARB|5915|retinoic acid receptor, beta##NM_016152|RARB|5915|retinoic acid receptor, beta	0.997891	CTCF.p2:-4:0.998
chr4	47928737	47928846	reg1011895.p2	9.500	+	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	-12196	-	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	-88701	-	TSC_hg19_v1_chr4_+_47708352 D28417	-220437	+	M84741 NM_001142564 S42457	54698	-	AK292021 NM_000087	86169	-	X64802 TSC_hg19_v1_chr4_-_48018662	89846	-	AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1##S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1##AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1	0.751379	CTCF.p2:2:0.751
chr2	188446250	188446401	reg1012977.p2	9.499	+	TSC_hg19_v1_chr2_-_188419185 NM_001032281 NM_006287	-27124	-	J03225 AF021834 TSC_hg19_v1_chr2_-_188419163 AK313562 BC015514 BC014332	-27215	-	DQ280491 U17473 L76380 AK291630 AK292998 DQ280490 NM_005795	-133379	-	AK055718 NM_001252668 NM_001252669 NM_016315 TSC_hg19_v1_chr2_+_189156445	710100	+	AK314498 TSC_hg19_v1_chr2_+_189156621	710291	+	TSC_hg19_v1_chr2_+_189156656 BC001103	710337	+	NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##J03225|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AF021834|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK313562|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC015514|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC014332|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##DQ280491|CALCRL|10203|calcitonin receptor-like##U17473|CALCRL|10203|calcitonin receptor-like##L76380|CALCRL|10203|calcitonin receptor-like##AK291630|CALCRL|10203|calcitonin receptor-like##AK292998|CALCRL|10203|calcitonin receptor-like##NM_005795|CALCRL|10203|calcitonin receptor-like##AK055718|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252668|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252669|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_016315|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AK314498|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##BC001103|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	0.993411	CTCF.p2:-2:0.993
chr2	43054881	43055009	reg1012992.p2	9.499	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-35194	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-63645	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-259048	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	398400	-	TSC_hg19_v1_chr2_-_43453736 BC020369	398785	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	398797	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.366051	CTCF.p2:-17:0.366
chr3	84597156	84597263	reg1011281.p1	9.499	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-2561907	+	TSC_hg19_v1_chr3_-_81810971 NM_000158	-2786267	-	TSC_hg19_v1_chr3_-_81810866 AB209731 BC012098	-2786361	-	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	410920	+	AF538973 NM_153184	1178422	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	2443042	-	NM_000158|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB209731|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##BC012098|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)	0.859607	CTCF.p2:1:0.860
chr7	95353046	95353174	reg1014386.p1	9.499	+	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	-127247	-	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-237817	+	TSC_hg19_v1_chr7_-_95064341 AB102891 CU692318 AB591009 L48513 BC040010 AF001602 AF001601 BC073739 AK296029 BC093006 BC046160 AK291103 AK308065 AK315209 AK296636 BC009728 NM_000305 NM_001018161 AK301313	-288749	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	48798	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	598292	-	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	779717	-	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##AB102891|PON2|5445|paraoxonase 2##L48513|PON2|5445|paraoxonase 2##BC040010|PON2|5445|paraoxonase 2##AF001602|PON2|5445|paraoxonase 2##AF001601|PON2|5445|paraoxonase 2##AK296029|PON2|5445|paraoxonase 2##BC093006|PON2|5445|paraoxonase 2##BC046160|PON2|5445|paraoxonase 2##AK291103|PON2|5445|paraoxonase 2##AK308065|PON2|5445|paraoxonase 2##AK315209|PON2|5445|paraoxonase 2##AK296636|PON2|5445|paraoxonase 2##BC009728|PON2|5445|paraoxonase 2##NM_000305|PON2|5445|paraoxonase 2##NM_001018161|PON2|5445|paraoxonase 2##AK301313|PON2|5445|paraoxonase 2##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280	0.597617	CTCF.p2:-22:0.598
chr7	95141124	95141241	reg1012073.p1	9.498	+	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-25889	+	TSC_hg19_v1_chr7_-_95064341 AB102891 CU692318 AB591009 L48513 BC040010 AF001602 AF001601 BC073739 AK296029 BC093006 BC046160 AK291103 AK308065 AK315209 AK296636 BC009728 NM_000305 NM_001018161 AK301313	-76821	-	L48516 AF320003 AF329433 CU687094 TSC_hg19_v1_chr7_-_95025687 AK301772 BC070374 AK304282 NM_000940	-115526	-	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	84681	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	260726	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	810220	-	BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##AB102891|PON2|5445|paraoxonase 2##L48513|PON2|5445|paraoxonase 2##BC040010|PON2|5445|paraoxonase 2##AF001602|PON2|5445|paraoxonase 2##AF001601|PON2|5445|paraoxonase 2##AK296029|PON2|5445|paraoxonase 2##BC093006|PON2|5445|paraoxonase 2##BC046160|PON2|5445|paraoxonase 2##AK291103|PON2|5445|paraoxonase 2##AK308065|PON2|5445|paraoxonase 2##AK315209|PON2|5445|paraoxonase 2##AK296636|PON2|5445|paraoxonase 2##BC009728|PON2|5445|paraoxonase 2##NM_000305|PON2|5445|paraoxonase 2##NM_001018161|PON2|5445|paraoxonase 2##AK301313|PON2|5445|paraoxonase 2##L48516|PON3|5446|paraoxonase 3##AF320003|PON3|5446|paraoxonase 3##AF329433|PON3|5446|paraoxonase 3##BC070374|PON3|5446|paraoxonase 3##AK304282|PON3|5446|paraoxonase 3##NM_000940|PON3|5446|paraoxonase 3##BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	0.993658	CTCF.p2:7:0.994
chr1	174967743	174967877	reg1013118.p1	9.497	+	AK316355 NM_001243764 AK316219 AK298711	-33889	+	NM_001035230 BC012094	-123141	+	NM_001243763 AL049701	-124251	+	NM_001007214 AK093425 AX748118	773	+	TSC_hg19_v1_chr1_+_174968845 NM_014412	1057	+	TSC_hg19_v1_chr1_+_174969090 BC005975	1271	+	AK316355|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243764|RABGAP1L|9910|RAB GTPase activating protein 1-like##AK316219|RABGAP1L|9910|RAB GTPase activating protein 1-like##AK298711|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001035230|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC012094|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243763|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL049701|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001007214|CACYBP|27101|calcyclin binding protein##AK093425|CACYBP|27101|calcyclin binding protein##NM_014412|CACYBP|27101|calcyclin binding protein##BC005975|CACYBP|27101|calcyclin binding protein	0.098196	
chr14	61026221	61026354	reg1014474.p1	9.497	+	BC065831 NM_007374 BC087852 BC069413 AJ011785 EU446644	-50261	+	BC125070 BC125071 AK098187 NM_174978 AL832219	-73514	-	TSC_hg19_v1_chr14_+_60716314 AY236965	-309969	+	BT007083 CU679159 TSC_hg19_v1_chr14_-_61116196 BC008874 NM_005982 X91868	89803	-	AF032107 TSC_hg19_v1_chr14_-_61190584 BC098135 BC098282 BC099722 BC101934 EU446619 EU446844 NM_017420	164367	-	TSC_hg19_v1_chr14_-_61191035 AK309358	164770	-	BC065831|SIX6|4990|SIX homeobox 6##NM_007374|SIX6|4990|SIX homeobox 6##BC087852|SIX6|4990|SIX homeobox 6##BC069413|SIX6|4990|SIX homeobox 6##AJ011785|SIX6|4990|SIX homeobox 6##EU446644|SIX6|4990|SIX homeobox 6##BC125070|C14orf39|317761|chromosome 14 open reading frame 39##BC125071|C14orf39|317761|chromosome 14 open reading frame 39##AK098187|C14orf39|317761|chromosome 14 open reading frame 39##NM_174978|C14orf39|317761|chromosome 14 open reading frame 39##AL832219|C14orf39|317761|chromosome 14 open reading frame 39##AY236965|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BT007083|SIX1|6495|SIX homeobox 1##BC008874|SIX1|6495|SIX homeobox 1##NM_005982|SIX1|6495|SIX homeobox 1##X91868|SIX1|6495|SIX homeobox 1##AF032107|SIX4|51804|SIX homeobox 4##BC098135|SIX4|51804|SIX homeobox 4##BC098282|SIX4|51804|SIX homeobox 4##BC099722|SIX4|51804|SIX homeobox 4##BC101934|SIX4|51804|SIX homeobox 4##EU446619|SIX4|51804|SIX homeobox 4##EU446844|SIX4|51804|SIX homeobox 4##NM_017420|SIX4|51804|SIX homeobox 4##AK309358|SIX4|51804|SIX homeobox 4	0.907794	CTCF.p2:3:0.908
chr17	36444334	36444447	reg1014437.p1	9.497	+	BC067792 TSC_hg19_v1_chr17_-_36413224	-31153	-	BC033670 BC047739 AL136860 AK301823 BC071680 BC078140 AK302064 AK313329 NM_001123391 NM_032258	-95765	-	NM_001123391 NM_032258 AK313329 AK302064 BC078140 BC071680 AK301823 AL136860 BC047739	-160397	+	NM_032351 AK293605 BC130382 BC130384 TSC_hg19_v1_chr17_+_36453120	8664	+	TSC_hg19_v1_chr17_+_36453138 AK172741 AK225031 HQ258365 BC006235	8747	+	AY584611 NM_001004334	55302	-	BC067792|LOC440434|440434|aminopeptidase puromycin sensitive pseudogene##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##AK302064|TBC1D3|729873|TBC1 domain family, member 3##AK313329|TBC1D3|729873|TBC1 domain family, member 3##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##AK313329|TBC1D3|729873|TBC1 domain family, member 3##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##NM_032351|MRPL45|84311|mitochondrial ribosomal protein L45##AK293605|MRPL45|84311|mitochondrial ribosomal protein L45##BC130382|MRPL45|84311|mitochondrial ribosomal protein L45##BC130384|MRPL45|84311|mitochondrial ribosomal protein L45##AK172741|MRPL45|84311|mitochondrial ribosomal protein L45##AK225031|MRPL45|84311|mitochondrial ribosomal protein L45##HQ258365|MRPL45|84311|mitochondrial ribosomal protein L45##BC006235|MRPL45|84311|mitochondrial ribosomal protein L45##AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179	0.99225	CTCF.p2:6:0.992
chr5	100726157	100726270	reg1012180.p1	9.497	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-487285	-	AF529367 TSC_hg19_v1_chr5_+_99871306	-854943	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-855140	+	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	905895	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	1108420	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	1475317	+	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase	0.98771	CTCF.p2:18:0.988
chr13	100308497	100308642	reg1015666.p1	9.495	+	TSC_hg19_v1_chr13_+_100258943 NM_206808 AK300510 BC034360 AK095506 AF428253 CU689862	-49649	+	BC041830 TSC_hg19_v1_chr13_+_100229390	-79192	+	TSC_hg19_v1_chr13_+_100153777 BC130293	-154787	+	AF378304 NM_033132	315600	-	TSC_hg19_v1_chr13_+_100633453 AK298232	324886	+	TSC_hg19_v1_chr13_+_100634037 NM_007129	325451	+	NM_206808|CLYBL|171425|citrate lyase beta like##AK300510|CLYBL|171425|citrate lyase beta like##BC034360|CLYBL|171425|citrate lyase beta like##AK095506|CLYBL|171425|citrate lyase beta like##AF428253|CLYBL|171425|citrate lyase beta like##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2##AF378304|ZIC5|85416|Zic family member 5##NM_033132|ZIC5|85416|Zic family member 5##NM_007129|ZIC2|7546|Zic family member 2	0.997711	CTCF.p2:-13:0.998
chr14	24950890	24951008	reg1015119.p1	9.495	+	AK056368 TSC_hg19_v1_chr14_+_24912196	-38761	+	BX161384 TSC_hg19_v1_chr14_-_24911979 BC008566 AF226050 AK123513 BC000989 NM_020195	-39055	-	TSC_hg19_v1_chr14_+_24899159 NM_015299 AK291680 BX161465 BC042554	-51779	+	DQ082727 DQ082729 AB451464 AB590823 CU686784 M69136 BC069110 BC069370 BC069490 BC103974 BC103975 NM_001836	26496	-	AB590242 CR456807 CR541704 DQ893067 DQ896320 M16117 TSC_hg19_v1_chr14_-_25045457 AK225914 BC014460 NM_001911	94497	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	127912	-	BX161384|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##BC008566|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##AF226050|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##AK123513|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##BC000989|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##NM_020195|SDR39U1|56948|short chain dehydrogenase/reductase family 39U, member 1##NM_015299|KHNYN|23351|KH and NYN domain containing##AK291680|KHNYN|23351|KH and NYN domain containing##BX161465|KHNYN|23351|KH and NYN domain containing##BC042554|KHNYN|23351|KH and NYN domain containing##DQ082727|CMA1|1215|chymase 1, mast cell##DQ082729|CMA1|1215|chymase 1, mast cell##AB451464|CMA1|1215|chymase 1, mast cell##M69136|CMA1|1215|chymase 1, mast cell##BC069110|CMA1|1215|chymase 1, mast cell##BC069370|CMA1|1215|chymase 1, mast cell##BC069490|CMA1|1215|chymase 1, mast cell##BC103974|CMA1|1215|chymase 1, mast cell##BC103975|CMA1|1215|chymase 1, mast cell##NM_001836|CMA1|1215|chymase 1, mast cell##CR456807|CTSG|1511|cathepsin G##CR541704|CTSG|1511|cathepsin G##DQ893067|CTSG|1511|cathepsin G##DQ896320|CTSG|1511|cathepsin G##M16117|CTSG|1511|cathepsin G##AK225914|CTSG|1511|cathepsin G##BC014460|CTSG|1511|cathepsin G##NM_001911|CTSG|1511|cathepsin G##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)	0.465822	CTCF.p2:0:0.466
chr17	2578721	2578825	reg1013645.p1	9.495	+	TSC_hg19_v1_chr17_+_2497263 BX538346 AK313078 L13385 BC064638	-81515	+	TSC_hg19_v1_chr17_+_2496944 NM_000430 L13386	-81803	+	TSC_hg19_v1_chr17_-_2415189 BX647255 AK294547 BC050603 BC001213 AL832612 AK027410 AK296464 NM_024086	-163628	-	NM_015229 TSC_hg19_v1_chr17_-_2615039	36214	-	AK124640 TSC_hg19_v1_chr17_+_2680496	101650	+	AJ628446 AJ628447 NM_001100398 NM_015085 TSC_hg19_v1_chr17_+_2699761 CR627427 BC140870 BC140871	120980	+	BX538346|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##AK313078|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13385|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BC064638|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##NM_000430|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13386|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BX647255|METTL16|79066|methyltransferase like 16##AK294547|METTL16|79066|methyltransferase like 16##BC050603|METTL16|79066|methyltransferase like 16##BC001213|METTL16|79066|methyltransferase like 16##AL832612|METTL16|79066|methyltransferase like 16##AK027410|METTL16|79066|methyltransferase like 16##AK296464|METTL16|79066|methyltransferase like 16##NM_024086|METTL16|79066|methyltransferase like 16##NM_015229|KIAA0664|23277|KIAA0664##AK124640|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AJ628446|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AJ628447|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_001100398|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015085|RAP1GAP2|23108|RAP1 GTPase activating protein 2##CR627427|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140870|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140871|RAP1GAP2|23108|RAP1 GTPase activating protein 2	0.999772	CTCF.p2:7:1.000
chr1	187020883	187021028	reg1014976.p1	9.494	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-222867	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-371465	-	M33478 NM_002597	-590728	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	3425780	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	5106648	+	AY643711 NM_001039152	5265166	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.989496	CTCF.p2:-21:0.989
chr19	8035780	8035918	reg1014119.p1	9.494	+	TSC_hg19_v1_chr19_-_8008615 AK289634 NM_006351	-27193	-	AF026030 BC000679 AB590328 CU689670 BC033628 TSC_hg19_v1_chr19_-_8008548 DQ891301 DQ894486 AK223062 AK309415 AF041254	-27297	-	TSC_hg19_v1_chr19_-_7991004 BC062702 AK098834 NM_206833	-44833	-	TSC_hg19_v1_chr19_-_8070526 U38175 BC003376 NM_001419	34676	-	AK292662 NM_001201359 NM_005624	81796	+	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	82098	+	AK289634|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##NM_006351|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AF026030|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##BC033628|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##DQ891301|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##DQ894486|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK223062|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK309415|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AF041254|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##BC062702|CTXN1|404217|cortexin 1##AK098834|CTXN1|404217|cortexin 1##NM_206833|CTXN1|404217|cortexin 1##U38175|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##BC003376|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##NM_001419|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##AK292662|CCL25|6370|chemokine (C-C motif) ligand 25##NM_001201359|CCL25|6370|chemokine (C-C motif) ligand 25##NM_005624|CCL25|6370|chemokine (C-C motif) ligand 25##BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25	0.99261	CTCF.p2:-16:0.993
chr4	83189863	83189975	reg1011969.p1	9.494	+	TSC_hg19_v1_chr4_-_82393062 AK291459 BC036784 AK303625 AK056257 NM_152545	-796859	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	-796936	-	AB528214 D70899 NM_006259 X94612	-1063712	-	D55671 TSC_hg19_v1_chr4_-_83294725	104756	-	AF039575 X03910 AB463729 DQ892240 DQ895440 BC002401 TSC_hg19_v1_chr4_-_83294907	104953	-	TSC_hg19_v1_chr4_-_83295122 D55674 AK057836 D55672 BC023977 BC026015	105161	-	AK291459|RASGEF1B|153020|RasGEF domain family, member 1B##BC036784|RASGEF1B|153020|RasGEF domain family, member 1B##AK303625|RASGEF1B|153020|RasGEF domain family, member 1B##AK056257|RASGEF1B|153020|RasGEF domain family, member 1B##NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##D55671|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##AF039575|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##X03910|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##DQ892240|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##DQ895440|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##BC002401|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##D55674|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##AK057836|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##D55672|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##BC023977|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##BC026015|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	0.897399	CTCF.p2:6:0.897
chr4	72095593	72095706	reg1011359.p2	9.493	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	-42926	+	M60527 TSC_hg19_v1_chr4_+_71859434 BC114617 JF806429 BT019941 BT019942 CR536527 CR541876	-236178	+	TSC_hg19_v1_chr4_+_71859320 NM_000788 AK303292 AK313523 BC103764	-236342	+	AF069510 AB470072 AF053753 AF053754 AF310248 EF531618 TSC_hg19_v1_chr4_+_72102322	6637	+	BC030977 NM_003759 AF007216 AK308038 CU689062	109218	+	AB591002 CU691194 M12654 TSC_hg19_v1_chr4_-_72649797 AK290827 AK298433 AK312971 BC057228 BC022310 X03178 AK315853 NM_000583	554257	-	AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##M60527|DCK|1633|deoxycytidine kinase##BC114617|DCK|1633|deoxycytidine kinase##JF806429|DCK|1633|deoxycytidine kinase##BT019941|DCK|1633|deoxycytidine kinase##BT019942|DCK|1633|deoxycytidine kinase##CR536527|DCK|1633|deoxycytidine kinase##CR541876|DCK|1633|deoxycytidine kinase##NM_000788|DCK|1633|deoxycytidine kinase##AK303292|DCK|1633|deoxycytidine kinase##AK313523|DCK|1633|deoxycytidine kinase##BC103764|DCK|1633|deoxycytidine kinase##AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK290827|GC|2638|group-specific component (vitamin D binding protein)##AK298433|GC|2638|group-specific component (vitamin D binding protein)##AK312971|GC|2638|group-specific component (vitamin D binding protein)##BC057228|GC|2638|group-specific component (vitamin D binding protein)##BC022310|GC|2638|group-specific component (vitamin D binding protein)##X03178|GC|2638|group-specific component (vitamin D binding protein)##AK315853|GC|2638|group-specific component (vitamin D binding protein)##NM_000583|GC|2638|group-specific component (vitamin D binding protein)	0.968035	CTCF.p2:-14:0.957
chr10	112835988	112836133	reg1015104.p1	9.492	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-156680	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-156700	+	TSC_hg19_v1_chr10_+_112679309 NM_007373	-156765	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	792	+	AB046780 TSC_hg19_v1_chr10_-_113933602	1097501	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	1107445	-	BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##NM_007373|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	0.990912	CTCF.p2:-9:0.991
chr17	30466011	30466147	reg1015726.p1	9.492	+	AY386261 AK302740 BC117373 BC143578 BC143581 AK310287 NM_052888 HQ258530 AJ314647	-117986	+	AB385289 TSC_hg19_v1_chr17_+_30264319	-201785	+	TSC_hg19_v1_chr17_+_30264164 BC015704	-201916	+	TSC_hg19_v1_chr17_+_30469463 BC060781 NM_001033566 NM_001033568 NM_018307 AJ496730	3349	+	TSC_hg19_v1_chr17_+_30469520 BC041114	3443	+	TSC_hg19_v1_chr17_+_30469544 BC110895	3466	+	AY386261|LRRC37B|114659|leucine rich repeat containing 37B##AK302740|LRRC37B|114659|leucine rich repeat containing 37B##BC117373|LRRC37B|114659|leucine rich repeat containing 37B##BC143578|LRRC37B|114659|leucine rich repeat containing 37B##BC143581|LRRC37B|114659|leucine rich repeat containing 37B##AK310287|LRRC37B|114659|leucine rich repeat containing 37B##NM_052888|LRRC37B|114659|leucine rich repeat containing 37B##HQ258530|LRRC37B|114659|leucine rich repeat containing 37B##AJ314647|LRRC37B|114659|leucine rich repeat containing 37B##BC015704|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)##BC060781|RHOT1|55288|ras homolog gene family, member T1##NM_001033566|RHOT1|55288|ras homolog gene family, member T1##NM_001033568|RHOT1|55288|ras homolog gene family, member T1##NM_018307|RHOT1|55288|ras homolog gene family, member T1##AJ496730|RHOT1|55288|ras homolog gene family, member T1##BC041114|RHOT1|55288|ras homolog gene family, member T1##BC110895|RHOT1|55288|ras homolog gene family, member T1	1.041567	CTCF.p2:8:0.959
chr9	129261587	129261719	reg1015134.p1	9.492	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-172486	+	AK309713 NM_001134778	-751176	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-751953	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	115108	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	305657	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	361291	+	NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34	0.99816	CTCF.p2:-8:0.998
chr9	76298907	76299027	reg1013330.p1	9.491	+	TSC_hg19_v1_chr9_+_75766797 BC001275	-532164	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	-532189	+	NM_000689	-730735	-	NM_006914 BC051830 Y08639	813307	+	AY333284 NM_001177311	1203295	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	1203767	-	BC001275|ANXA1|301|annexin A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B##AY333284|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177311|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	0.063944	
chr22	34313861	34314030	reg1013601.p1	9.490	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-859590	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-911219	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-1116193	+	AJ007583 AB011181 NM_004737 NM_133642	2425	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1148204	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1339531	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.448863	CTCF.p2:25:0.449
chr11	20359219	20359345	reg1012614.p2	9.489	+	NM_001029865	-177413	-	AK290458 TSC_hg19_v1_chr11_+_20070637	-288659	+	TSC_hg19_v1_chr11_+_20049136 AK307574	-310150	+	NM_006410 TSC_hg19_v1_chr11_+_20385245 NM_001098521	25960	+	TSC_hg19_v1_chr11_+_20385268 AK292092 NM_001098520	25999	+	TSC_hg19_v1_chr11_+_20385346 BC002439 NM_001098522	26081	+	NM_001029865|DBX1|120237|developing brain homeobox 1##AK290458|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##NM_006410|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098521|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AK292092|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098520|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##BC002439|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098522|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa	0.273155	CTCF.p2:6:0.273
chr12	13387120	13387223	reg1013374.p1	9.489	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-37442	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-37454	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-37533	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	745815	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	1131464	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	1151101	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.0	
chr4	128526615	128526718	reg1011981.p2	9.489	+	NM_024582	-2289100	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	-2892852	-	AK026960 BC063856 NM_005841	-4205993	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	27473	+	TSC_hg19_v1_chr4_+_128651573 NM_031291 AL136857 AY550240 BC022032 AB528294 AM393262 CU692468 AJ863129	124943	+	TSC_hg19_v1_chr4_+_128703445 BC040560 NM_014278	176767	+	NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##NM_031291|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AL136857|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AY550240|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC022032|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AM393262|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AJ863129|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC040560|HSPA4L|22824|heat shock 70kDa protein 4-like##NM_014278|HSPA4L|22824|heat shock 70kDa protein 4-like	0.878511	CTCF.p2:-13:0.879
chr1	49143126	49143240	reg1013154.p1	9.488	+	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	-205338	-	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	-205505	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	-454791	+	BC011804 AK021650 CU675869 NM_024603 BC007932	99314	-	TSC_hg19_v1_chr1_-_50489560 BC035739 AK094826 AK294394	1346364	-	TSC_hg19_v1_chr1_-_50489627 AK294633 AK296221 NM_032785	1346464	-	AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC011804|BEND5|79656|BEN domain containing 5##AK021650|BEND5|79656|BEN domain containing 5##NM_024603|BEND5|79656|BEN domain containing 5##BC007932|BEND5|79656|BEN domain containing 5##BC035739|AGBL4|84871|ATP/GTP binding protein-like 4##AK094826|AGBL4|84871|ATP/GTP binding protein-like 4##AK294394|AGBL4|84871|ATP/GTP binding protein-like 4##AK294633|AGBL4|84871|ATP/GTP binding protein-like 4##AK296221|AGBL4|84871|ATP/GTP binding protein-like 4##NM_032785|AGBL4|84871|ATP/GTP binding protein-like 4	0.015081	
chr9	124260562	124260685	reg1012416.p1	9.488	+	BC010703 TSC_hg19_v1_chr9_-_124132529 AK307999 AK304449 AK304518 AK302977 NM_004099 NM_198194	-128081	-	CR542100 X60067 AB528375 DQ891058 DQ894236 CU679799 TSC_hg19_v1_chr9_-_124132480 M81635	-128148	-	BC017491 TSC_hg19_v1_chr9_+_124086860	-173751	+	AF378121 AF378122 AF378123 TSC_hg19_v1_chr9_-_124262101 BC045756	1466	-	NM_032552	68775	+	TSC_hg19_v1_chr9_+_124461442 AF367051	200883	+	BC010703|STOM|2040|stomatin##AK307999|STOM|2040|stomatin##AK304449|STOM|2040|stomatin##AK304518|STOM|2040|stomatin##AK302977|STOM|2040|stomatin##NM_004099|STOM|2040|stomatin##NM_198194|STOM|2040|stomatin##CR542100|STOM|2040|stomatin##X60067|STOM|2040|stomatin##DQ891058|STOM|2040|stomatin##DQ894236|STOM|2040|stomatin##M81635|STOM|2040|stomatin##BC017491|GSN|2934|gelsolin##AF378121|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378122|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378123|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC045756|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##NM_032552|DAB2IP|153090|DAB2 interacting protein##AF367051|DAB2IP|153090|DAB2 interacting protein	0.9411	CTCF.p2:4:0.941
chr1	171196014	171196136	reg1014180.p1	9.487	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	-41653	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	-136034	+	NM_001163629 NM_025063 AK027203 BC113390 BC113392	-291428	+	AK290113 AK315100 M64082 NM_002021 AK296198	21586	+	BC002780 NM_002022 Z11737	87353	+	TSC_hg19_v1_chr1_+_171454689 BC066968 NM_015172 BC058930 BC026108 BC045713 BC001260 BC006090	258619	+	NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##NM_001163629|C1orf129|80133|chromosome 1 open reading frame 129##NM_025063|C1orf129|80133|chromosome 1 open reading frame 129##AK027203|C1orf129|80133|chromosome 1 open reading frame 129##BC113390|C1orf129|80133|chromosome 1 open reading frame 129##BC113392|C1orf129|80133|chromosome 1 open reading frame 129##AK290113|FMO1|2326|flavin containing monooxygenase 1##AK315100|FMO1|2326|flavin containing monooxygenase 1##M64082|FMO1|2326|flavin containing monooxygenase 1##NM_002021|FMO1|2326|flavin containing monooxygenase 1##AK296198|FMO1|2326|flavin containing monooxygenase 1##BC002780|FMO4|2329|flavin containing monooxygenase 4##NM_002022|FMO4|2329|flavin containing monooxygenase 4##Z11737|FMO4|2329|flavin containing monooxygenase 4##BC066968|PRRC2C|23215|proline-rich coiled-coil 2C##NM_015172|PRRC2C|23215|proline-rich coiled-coil 2C##BC058930|PRRC2C|23215|proline-rich coiled-coil 2C##BC026108|PRRC2C|23215|proline-rich coiled-coil 2C##BC045713|PRRC2C|23215|proline-rich coiled-coil 2C##BC001260|PRRC2C|23215|proline-rich coiled-coil 2C##BC006090|PRRC2C|23215|proline-rich coiled-coil 2C	0.145635	
chr6	36819031	36819133	reg1008690.p2	9.487	+	TSC_hg19_v1_chr6_-_36807775 AB046819	-11290	-	TSC_hg19_v1_chr6_-_36807217 NM_020939	-11864	-	AK125083 TSC_hg19_v1_chr6_+_36665627	-153454	+	DQ892513 DQ895727 AB528504 TSC_hg19_v1_chr6_-_36842573 AK026636	23495	-	BC003048 AF151882 AY359032 TSC_hg19_v1_chr6_-_36842797	23692	-	NM_016059 TSC_hg19_v1_chr6_-_36842800	23718	-	AB046819|CPNE5|57699|copine V##NM_020939|CPNE5|57699|copine V##AK125083|RAB44|401258|RAB44, member RAS oncogene family##DQ892513|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##DQ895727|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##AK026636|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##BC003048|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##AF151882|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##AY359032|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##NM_016059|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1	0.961803	CTCF.p2:7:0.962
chr7	14731367	14731502	reg1014765.p1	9.487	+	NM_001163148	-700385	-	NM_001163149 X87175	-700566	-	NM_001163147 NM_004956	-701793	-	BC105005 BC143632 BC143633 NM_004080 NM_145695	149580	-	BC108676 AK131284 NM_001004320	870172	-	AB463880 CR536553 CU677801 L36328 TSC_hg19_v1_chr7_-_15726203 BC017021 AK313386	994695	-	NM_001163148|ETV1|2115|ets variant 1##NM_001163149|ETV1|2115|ets variant 1##X87175|ETV1|2115|ets variant 1##NM_001163147|ETV1|2115|ets variant 1##NM_004956|ETV1|2115|ets variant 1##BC105005|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143632|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143633|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_004080|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_145695|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC108676|AGMO|392636|alkylglycerol monooxygenase##AK131284|AGMO|392636|alkylglycerol monooxygenase##NM_001004320|AGMO|392636|alkylglycerol monooxygenase##CR536553|MEOX2|4223|mesenchyme homeobox 2##L36328|MEOX2|4223|mesenchyme homeobox 2##BC017021|MEOX2|4223|mesenchyme homeobox 2##AK313386|MEOX2|4223|mesenchyme homeobox 2	0.985222	CTCF.p2:8:0.985
chr1	145299792	145299935	reg1014367.p1	9.486	+	AY894562 AY894570 NM_001039703	-6562	+	TSC_hg19_v1_chr1_+_145209107 NM_203458 BC010154 AK075065 BC090943 BC019835 AK092351 AK098372 AX747492 BC065219 AK293876 BC084572	-90742	+	TSC_hg19_v1_chr1_+_145096519 CU674670 DQ892584 DQ895801	-203331	+	NM_145277 NM_202004 NM_213652 NM_213653 AK223575 AK092682 AK315852 AX747669 BC017926 AK096905 AK290831 AK292742 AK092692 AK124273 AX747673 BC085604	113400	+	TSC_hg19_v1_chr1_+_145438489 NM_006472 AK301203 BX537824 AK226090 S73591 BC093702 BC093704 AB527234 AY594328 BC024305 AK301148	138813	+	TSC_hg19_v1_chr1_-_145470375 AK092209 AK056984 BC004355 NM_032305 BC050418	170525	-	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8##NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10##NM_203458|NOTCH2NL|388677|notch 2 N-terminal like##BC010154|NOTCH2NL|388677|notch 2 N-terminal like##AK075065|NOTCH2NL|388677|notch 2 N-terminal like##BC090943|NOTCH2NL|388677|notch 2 N-terminal like##BC019835|NOTCH2NL|388677|notch 2 N-terminal like##BC065219|NOTCH2NL|388677|notch 2 N-terminal like##BC084572|NOTCH2NL|388677|notch 2 N-terminal like##DQ892584|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##DQ895801|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##NM_145277|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_202004|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213652|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213653|HFE2|148738|hemochromatosis type 2 (juvenile)##AK223575|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092682|HFE2|148738|hemochromatosis type 2 (juvenile)##AK315852|HFE2|148738|hemochromatosis type 2 (juvenile)##BC017926|HFE2|148738|hemochromatosis type 2 (juvenile)##AK096905|HFE2|148738|hemochromatosis type 2 (juvenile)##AK290831|HFE2|148738|hemochromatosis type 2 (juvenile)##AK292742|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092692|HFE2|148738|hemochromatosis type 2 (juvenile)##AK124273|HFE2|148738|hemochromatosis type 2 (juvenile)##BC085604|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_006472|TXNIP|10628|thioredoxin interacting protein##AK301203|TXNIP|10628|thioredoxin interacting protein##BX537824|TXNIP|10628|thioredoxin interacting protein##AK226090|TXNIP|10628|thioredoxin interacting protein##S73591|TXNIP|10628|thioredoxin interacting protein##BC093702|TXNIP|10628|thioredoxin interacting protein##BC093704|TXNIP|10628|thioredoxin interacting protein##AY594328|TXNIP|10628|thioredoxin interacting protein##BC024305|TXNIP|10628|thioredoxin interacting protein##AK301148|TXNIP|10628|thioredoxin interacting protein##AK092209|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##AK056984|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC004355|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##NM_032305|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC050418|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like	0.968636	CTCF.p2:-19:0.969
chr18	21498513	21498644	reg1013100.p1	9.486	+	TSC_hg19_v1_chr18_+_21452983 NM_000227 NM_001127718 X85107 X84392 AY327114 L34155	-45567	+	TSC_hg19_v1_chr18_+_21269563 BC093406 NM_001127717 NM_198129 AY327115 AY327116	-228991	+	TSC_hg19_v1_chr18_+_21269416 AK096422	-229164	+	AK091080 AX746769 NM_153211 BC121034 BC121035	74216	+	TSC_hg19_v1_chr18_+_21594449 BC016833 NM_001135993 NM_001243425	95821	+	TSC_hg19_v1_chr18_+_21594754 AK074875	96178	+	NM_000227|LAMA3|3909|laminin, alpha 3##NM_001127718|LAMA3|3909|laminin, alpha 3##X85107|LAMA3|3909|laminin, alpha 3##X84392|LAMA3|3909|laminin, alpha 3##AY327114|LAMA3|3909|laminin, alpha 3##L34155|LAMA3|3909|laminin, alpha 3##BC093406|LAMA3|3909|laminin, alpha 3##NM_001127717|LAMA3|3909|laminin, alpha 3##NM_198129|LAMA3|3909|laminin, alpha 3##AY327115|LAMA3|3909|laminin, alpha 3##AY327116|LAMA3|3909|laminin, alpha 3##AK096422|LAMA3|3909|laminin, alpha 3##AK091080|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_153211|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121034|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121035|TTC39C|125488|tetratricopeptide repeat domain 39C##BC016833|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001135993|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001243425|TTC39C|125488|tetratricopeptide repeat domain 39C##AK074875|TTC39C|125488|tetratricopeptide repeat domain 39C	0.998893	CTCF.p2:13:0.999
chr1	120205933	120206035	reg1012466.p1	9.485	+	NM_001080470	-15595	-	NM_000862 S45679 AK291556 BC031999 M35493 X53321 M27137 DQ891161 DQ894342 CU689258 X55997	-156022	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	-248223	+	NM_006623 AK315360 BC011262 TSC_hg19_v1_chr1_+_120254558 AK309662 AK310132 AF171237 BC000303 BC001349 BC023235 DQ892073 EU176546 AB528378 CR456795	48547	+	CR456850 BC044217 X83618 AK301594 AK313590 TSC_hg19_v1_chr1_-_120311529 AK302276 AK303777 NM_001166107 NM_005518	105526	-	AY007243 AF345934 BC017089 TSC_hg19_v1_chr1_-_120354084 AF254415 AY126670 AY126671 AY126672 NM_001159352 NM_001159353 NM_032044	148146	-	NM_001080470|ZNF697|90874|zinc finger protein 697##NM_000862|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##S45679|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##AK291556|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##BC031999|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M35493|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X53321|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M27137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ891161|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ894342|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X55997|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase##AK315360|PHGDH|26227|phosphoglycerate dehydrogenase##BC011262|PHGDH|26227|phosphoglycerate dehydrogenase##AK309662|PHGDH|26227|phosphoglycerate dehydrogenase##AK310132|PHGDH|26227|phosphoglycerate dehydrogenase##AF171237|PHGDH|26227|phosphoglycerate dehydrogenase##BC000303|PHGDH|26227|phosphoglycerate dehydrogenase##BC001349|PHGDH|26227|phosphoglycerate dehydrogenase##BC023235|PHGDH|26227|phosphoglycerate dehydrogenase##DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase##EU176546|PHGDH|26227|phosphoglycerate dehydrogenase##CR456795|PHGDH|26227|phosphoglycerate dehydrogenase##CR456850|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##BC044217|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##X83618|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK301594|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK313590|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK302276|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK303777|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_001166107|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_005518|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AY007243|REG4|83998|regenerating islet-derived family, member 4##AF345934|REG4|83998|regenerating islet-derived family, member 4##BC017089|REG4|83998|regenerating islet-derived family, member 4##AF254415|REG4|83998|regenerating islet-derived family, member 4##AY126670|REG4|83998|regenerating islet-derived family, member 4##AY126671|REG4|83998|regenerating islet-derived family, member 4##AY126672|REG4|83998|regenerating islet-derived family, member 4##NM_001159352|REG4|83998|regenerating islet-derived family, member 4##NM_001159353|REG4|83998|regenerating islet-derived family, member 4##NM_032044|REG4|83998|regenerating islet-derived family, member 4	0.0	
chr1	183578490	183578635	reg1014413.p1	9.485	+	M32011 TSC_hg19_v1_chr1_-_183560049 NM_001127651	-18530	-	TSC_hg19_v1_chr1_-_183559669 BC001606 NM_000433 NM_001190789 NM_001190794	-18849	-	BT007439 AB590135 DQ893650 DQ895812 CU674784 AF527950 TSC_hg19_v1_chr1_-_183559595 AK296672 AK312666 AK298713	-19004	-	AB528796 TSC_hg19_v1_chr1_-_183604811 AF017807 CU691198 AF006088	26246	-	TSC_hg19_v1_chr1_-_183604862 AK129598	26295	-	TSC_hg19_v1_chr1_-_183604891 BC057237 NM_005717 BC071857	26378	-	M32011|NCF2|4688|neutrophil cytosolic factor 2##NM_001127651|NCF2|4688|neutrophil cytosolic factor 2##BC001606|NCF2|4688|neutrophil cytosolic factor 2##NM_000433|NCF2|4688|neutrophil cytosolic factor 2##NM_001190789|NCF2|4688|neutrophil cytosolic factor 2##NM_001190794|NCF2|4688|neutrophil cytosolic factor 2##BT007439|NCF2|4688|neutrophil cytosolic factor 2##DQ893650|NCF2|4688|neutrophil cytosolic factor 2##DQ895812|NCF2|4688|neutrophil cytosolic factor 2##AF527950|NCF2|4688|neutrophil cytosolic factor 2##AK296672|NCF2|4688|neutrophil cytosolic factor 2##AK312666|NCF2|4688|neutrophil cytosolic factor 2##AK298713|NCF2|4688|neutrophil cytosolic factor 2##AF017807|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##AF006088|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##AK129598|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##BC057237|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##NM_005717|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##BC071857|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa	0.505885	CTCF.p2:0:0.506
chr11	9037291	9037377	reg1010985.p1	9.485	+	BC008835 TSC_hg19_v1_chr11_-_9025549 AK024750 AK098694 AK296484 NM_020645	-11771	-	BC040124 TSC_hg19_v1_chr11_-_8986002	-51325	-	TSC_hg19_v1_chr11_-_8985986 AY359069 NM_020644	-51359	-	BC111690 AK131552 AK123039 NM_001170690 NM_020974 TSC_hg19_v1_chr11_-_9113185	75804	-	TSC_hg19_v1_chr11_-_9225783 AK302478	188487	-	AB029014 TSC_hg19_v1_chr11_-_9286891 BC071596 NM_001243254 NM_015213	249528	-	BC008835|NRIP3|56675|nuclear receptor interacting protein 3##AK024750|NRIP3|56675|nuclear receptor interacting protein 3##AK098694|NRIP3|56675|nuclear receptor interacting protein 3##AK296484|NRIP3|56675|nuclear receptor interacting protein 3##NM_020645|NRIP3|56675|nuclear receptor interacting protein 3##BC040124|TMEM9B|56674|TMEM9 domain family, member B##AY359069|TMEM9B|56674|TMEM9 domain family, member B##NM_020644|TMEM9B|56674|TMEM9 domain family, member B##BC111690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK131552|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK123039|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_001170690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_020974|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK302478|DENND5A|23258|DENN/MADD domain containing 5A##AB029014|DENND5A|23258|DENN/MADD domain containing 5A##BC071596|DENND5A|23258|DENN/MADD domain containing 5A##NM_001243254|DENND5A|23258|DENN/MADD domain containing 5A##NM_015213|DENND5A|23258|DENN/MADD domain containing 5A	0.986162	CTCF.p2:0:0.986
chr19	5804119	5804247	reg1012396.p1	9.485	+	TSC_hg19_v1_chr19_-_5791224 BC004549 AK315691 AK297037 NM_001161619 NM_020175	-12953	-	TSC_hg19_v1_chr19_-_5791185 BC009973	-12998	-	TSC_hg19_v1_chr19_-_5791173 AL365411 CU678764 EU832641 EU832718 AK023958 AK225840	-13140	-	AL161995 NM_004558	19634	+	TSC_hg19_v1_chr19_-_5838802 AF131211 AK098073 AK313130	34592	-	U27333 U27335 U27337 BC061700 BC040472 NM_000150 NM_001040701 TSC_hg19_v1_chr19_-_5839765	35551	-	BC004549|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK315691|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK297037|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##NM_001161619|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##NM_020175|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##BC009973|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AL365411|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##EU832641|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##EU832718|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK023958|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK225840|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AL161995|NRTN|4902|neurturin##NM_004558|NRTN|4902|neurturin##AF131211|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##AK098073|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##AK313130|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##U27333|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##U27335|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##U27337|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##BC061700|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##NM_000150|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##NM_001040701|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)	1.10524	CTCF.p2:59:0.978
chr22	40744176	40744304	reg1015207.p1	9.484	+	TSC_hg19_v1_chr22_+_40742532 NM_000026 NM_001123378 AF067853 AF067854 AK293722 CR456368 AK298187 AK291091 AK300705 BC000253 BC018881 AK225042 CU674104 AB462938 CU012935 CU013223 DQ893326 DQ896642 X65867 S60710	-1708	+	TSC_hg19_v1_chr22_+_40573938 NM_001162501 NM_015088 AK296590 AK294519 AB029016	-170241	+	TSC_hg19_v1_chr22_+_40441403 BC028626	-302808	+	TSC_hg19_v1_chr22_+_40766609 NM_015705 AK309400	22349	+	TSC_hg19_v1_chr22_+_40766619 AK295469	22379	+	TSC_hg19_v1_chr22_+_40766634 AK297599	22392	+	NM_000026|ADSL|158|adenylosuccinate lyase##NM_001123378|ADSL|158|adenylosuccinate lyase##AF067853|ADSL|158|adenylosuccinate lyase##AF067854|ADSL|158|adenylosuccinate lyase##CR456368|ADSL|158|adenylosuccinate lyase##AK298187|ADSL|158|adenylosuccinate lyase##AK291091|ADSL|158|adenylosuccinate lyase##AK300705|ADSL|158|adenylosuccinate lyase##BC000253|ADSL|158|adenylosuccinate lyase##BC018881|ADSL|158|adenylosuccinate lyase##AK225042|ADSL|158|adenylosuccinate lyase##CU012935|ADSL|158|adenylosuccinate lyase##CU013223|ADSL|158|adenylosuccinate lyase##DQ893326|ADSL|158|adenylosuccinate lyase##DQ896642|ADSL|158|adenylosuccinate lyase##X65867|ADSL|158|adenylosuccinate lyase##S60710|ADSL|158|adenylosuccinate lyase##NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B##NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B##AK296590|TNRC6B|23112|trinucleotide repeat containing 6B##AK294519|TNRC6B|23112|trinucleotide repeat containing 6B##AB029016|TNRC6B|23112|trinucleotide repeat containing 6B##BC028626|TNRC6B|23112|trinucleotide repeat containing 6B##NM_015705|SGSM3|27352|small G protein signaling modulator 3##AK309400|SGSM3|27352|small G protein signaling modulator 3##AK295469|SGSM3|27352|small G protein signaling modulator 3##AK297599|SGSM3|27352|small G protein signaling modulator 3	0.667041	CTCF.p2:10:0.667
chrX	107137397	107137555	reg1013297.p1	9.484	+	TSC_hg19_v1_chrX_+_107069526 AF196481	-67904	+	Y18880 TSC_hg19_v1_chrX_+_107069473	-68009	+	TSC_hg19_v1_chrX_+_107069107 NM_012216 NM_052817	-68373	+	BC150140 AF285598 NM_031273	88117	-	BX648658 NM_001170553 NM_182607 AK301783 BC043216 BX640913 AK315846 AK301311 AK292472	150783	+	AB528690 BT019689 GQ129344 GQ129345 AK295996 AK309326 TSC_hg19_v1_chrX_-_107334773 AB009619 AY057056 BC011960 AK058108 D83197 NM_002814 NM_170750	197335	-	AF196481|MID2|11043|midline 2##Y18880|MID2|11043|midline 2##NM_012216|MID2|11043|midline 2##NM_052817|MID2|11043|midline 2##AF285598|TEX13B|56156|testis expressed 13B##NM_031273|TEX13B|56156|testis expressed 13B##BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1##BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1##BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1##BT019689|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129344|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129345|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK295996|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK309326|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AB009619|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AY057056|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BC011960|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK058108|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##D83197|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_002814|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_170750|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10	0.999408	CTCF.p2:28:0.999
chr1	544702	544882	reg1007779.p1	9.483	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-177144	+	NM_001005484	-475702	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-515387	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	77250	-	TSC_hg19_v1_chr1_-_714015 BC006361	169225	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	218103	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	1.954004	CTCF.p2:-20:0.977	CTCF.p2:47:0.977
chr18	19477835	19477952	reg1013682.p1	9.483	+	CR749635 TSC_hg19_v1_chr18_+_19353654	-124246	+	AY149908 BC110581 BC110582 NM_020774	-156349	+	TSC_hg19_v1_chr18_+_19321288 AY147849	-156610	+	AK123079 TSC_hg19_v1_chr18_-_19749029	271093	-	X95701 BC027891 NM_005257 TSC_hg19_v1_chr18_+_19749549	271583	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	519932	-	CR749635|MIB1|57534|mindbomb homolog 1 (Drosophila)##AY149908|MIB1|57534|mindbomb homolog 1 (Drosophila)##BC110581|MIB1|57534|mindbomb homolog 1 (Drosophila)##BC110582|MIB1|57534|mindbomb homolog 1 (Drosophila)##NM_020774|MIB1|57534|mindbomb homolog 1 (Drosophila)##AY147849|MIB1|57534|mindbomb homolog 1 (Drosophila)##AK123079|LOC100128893|100128893|uncharacterized LOC100128893##X95701|GATA6|2627|GATA binding protein 6##BC027891|GATA6|2627|GATA binding protein 6##NM_005257|GATA6|2627|GATA binding protein 6##HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	0.894922	CTCF.p2:-7:0.895
chr15	64978470	64978590	reg1012421.p2	9.482	+	AB056456 TSC_hg19_v1_chr15_+_64885153	-93377	+	NM_015042	-186912	+	TSC_hg19_v1_chr15_+_64752786 BC142647	-225671	+	BC119629 BC119630 BC148316 BC127630 TSC_hg19_v1_chr15_-_64995360 BC127631 AF242520 AF242521	16830	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	16872	-	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	16939	-	NM_015042|ZNF609|23060|zinc finger protein 609##BC142647|ZNF609|23060|zinc finger protein 609##BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2##BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2	0.972933	CTCF.p2:-12:0.973
chr4	137785861	137785969	reg1011344.p1	9.482	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-2662997	-	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	-3712632	+	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	-3715459	+	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	667677	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	667727	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	1377449	-	NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	0.99649	CTCF.p2:9:0.996
chr4	53881938	53882057	reg1012406.p1	9.482	+	TSC_hg19_v1_chr4_+_53728483 AK021492 AK027267 AK314942 AY839725 AY839726 BC001087 BC001846 NM_023940 BC025694	-153509	+	AK095318 NM_001242690 NM_024534	-264204	-	AY189288 TSC_hg19_v1_chr4_-_53617616	-264407	-	BC012458 CU689380 GQ129374 GQ129375 TSC_hg19_v1_chr4_-_54232229 BC021137 AB074276 AK096833 BC032453 AY299407 NM_152540	350138	-	TSC_hg19_v1_chr4_+_54243807 AK295737	361772	+	TSC_hg19_v1_chr4_+_54243821 NM_001134937 NM_001134938 NM_030917	361818	+	AK027267|RASL11B|65997|RAS-like, family 11, member B##AK314942|RASL11B|65997|RAS-like, family 11, member B##AY839725|RASL11B|65997|RAS-like, family 11, member B##AY839726|RASL11B|65997|RAS-like, family 11, member B##BC001087|RASL11B|65997|RAS-like, family 11, member B##BC001846|RASL11B|65997|RAS-like, family 11, member B##NM_023940|RASL11B|65997|RAS-like, family 11, member B##BC025694|RASL11B|65997|RAS-like, family 11, member B##NM_001242690|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##NM_024534|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##AY189288|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##BC012458|SCFD2|152579|sec1 family domain containing 2##GQ129374|SCFD2|152579|sec1 family domain containing 2##GQ129375|SCFD2|152579|sec1 family domain containing 2##BC021137|SCFD2|152579|sec1 family domain containing 2##AB074276|SCFD2|152579|sec1 family domain containing 2##AK096833|SCFD2|152579|sec1 family domain containing 2##BC032453|SCFD2|152579|sec1 family domain containing 2##AY299407|SCFD2|152579|sec1 family domain containing 2##NM_152540|SCFD2|152579|sec1 family domain containing 2##AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	0.0	
chr8	82503227	82503358	reg1013489.p1	9.482	+	NM_001105281 EU733650 BC146973 BC146981	-59712	-	AB590738 BT006809 CR456903 J02874 TSC_hg19_v1_chr8_-_82395472 BC003672 NM_001442	-107854	-	AB528797 NM_001080526	-129535	-	AK300750 TSC_hg19_v1_chr8_-_82598565 AK312823 AK297078 BC008381 BC009565 AF042729 NM_001144878 NM_001144879 NM_005536	95260	-	AY825924 NM_001010893 BC136625 BC136631	103954	-	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	130234	-	NM_001105281|FABP12|646486|fatty acid binding protein 12##EU733650|FABP12|646486|fatty acid binding protein 12##BC146973|FABP12|646486|fatty acid binding protein 12##BC146981|FABP12|646486|fatty acid binding protein 12##BT006809|FABP4|2167|fatty acid binding protein 4, adipocyte##CR456903|FABP4|2167|fatty acid binding protein 4, adipocyte##J02874|FABP4|2167|fatty acid binding protein 4, adipocyte##BC003672|FABP4|2167|fatty acid binding protein 4, adipocyte##NM_001442|FABP4|2167|fatty acid binding protein 4, adipocyte##NM_001080526|FABP9|646480|fatty acid binding protein 9, testis##AK300750|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AK312823|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AK297078|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##BC008381|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##BC009565|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AF042729|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##NM_001144878|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##NM_001144879|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##NM_005536|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AY825924|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##NM_001010893|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136625|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136631|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1	0.789362	CTCF.p2:2:0.789
chr10	27512952	27513079	reg1011831.p2	9.481	+	TSC_hg19_v1_chr10_+_27444322 BC009107 AK225319	-68694	+	AK074804 TSC_hg19_v1_chr10_+_27444291 AK027719	-68736	+	AK022930 TSC_hg19_v1_chr10_-_27444222	-68807	-	TSC_hg19_v1_chr10_-_27529416 CU688904 AK295031 AK304842 BC025309 BC030555 BC011364 AK294510 NM_145698	16529	-	TSC_hg19_v1_chr10_-_27531030 AB082527	18000	-	TSC_hg19_v1_chr10_-_27531041 AK057469 AF505653 NM_001042473	18067	-	BC009107|MASTL|84930|microtubule associated serine/threonine kinase-like##AK225319|MASTL|84930|microtubule associated serine/threonine kinase-like##AK074804|MASTL|84930|microtubule associated serine/threonine kinase-like##AK027719|MASTL|84930|microtubule associated serine/threonine kinase-like##AK022930|YME1L1|10730|YME1-like 1 (S. cerevisiae)##AK295031|ACBD5|91452|acyl-CoA binding domain containing 5##AK304842|ACBD5|91452|acyl-CoA binding domain containing 5##BC025309|ACBD5|91452|acyl-CoA binding domain containing 5##BC030555|ACBD5|91452|acyl-CoA binding domain containing 5##BC011364|ACBD5|91452|acyl-CoA binding domain containing 5##AK294510|ACBD5|91452|acyl-CoA binding domain containing 5##NM_145698|ACBD5|91452|acyl-CoA binding domain containing 5##AB082527|ACBD5|91452|acyl-CoA binding domain containing 5##AK057469|ACBD5|91452|acyl-CoA binding domain containing 5##AF505653|ACBD5|91452|acyl-CoA binding domain containing 5##NM_001042473|ACBD5|91452|acyl-CoA binding domain containing 5	0.044021	
chr14	51181291	51181438	reg1015292.p1	9.481	+	TSC_hg19_v1_chr14_-_51135048 AK225896 AK095903	-46296	-	BC020537 TSC_hg19_v1_chr14_-_51135025 BC006385 NM_021818 AK021500	-46338	-	AJ292969 AK023071 TSC_hg19_v1_chr14_-_51135016 AK290883	-46424	-	AB046785 TSC_hg19_v1_chr14_-_51297860 BC065521 AF223937 AF223938 AF223939 AF302773 AY736182 NM_016350 NM_020921 NM_182944 NM_182946	116456	-	AY311396 AY311397 AY311398 AY311399 BC107141 NM_001206673 NM_181814 BC107142 AK128464	157514	+	AF046785 AF066858 TSC_hg19_v1_chr14_-_51411202 AK313206 Y15233 AK309333 BC065011 BC110791 BC009895 BC082229 AK225904 AK300580 BC095850 M14636 NM_001163940 NM_002863	229818	-	AK225896|SAV1|60485|salvador homolog 1 (Drosophila)##AK095903|SAV1|60485|salvador homolog 1 (Drosophila)##BC020537|SAV1|60485|salvador homolog 1 (Drosophila)##BC006385|SAV1|60485|salvador homolog 1 (Drosophila)##NM_021818|SAV1|60485|salvador homolog 1 (Drosophila)##AK021500|SAV1|60485|salvador homolog 1 (Drosophila)##AJ292969|SAV1|60485|salvador homolog 1 (Drosophila)##AK023071|SAV1|60485|salvador homolog 1 (Drosophila)##AK290883|SAV1|60485|salvador homolog 1 (Drosophila)##AB046785|NIN|51199|ninein (GSK3B interacting protein)##BC065521|NIN|51199|ninein (GSK3B interacting protein)##AF223937|NIN|51199|ninein (GSK3B interacting protein)##AF223938|NIN|51199|ninein (GSK3B interacting protein)##AF223939|NIN|51199|ninein (GSK3B interacting protein)##AF302773|NIN|51199|ninein (GSK3B interacting protein)##AY736182|NIN|51199|ninein (GSK3B interacting protein)##NM_016350|NIN|51199|ninein (GSK3B interacting protein)##NM_020921|NIN|51199|ninein (GSK3B interacting protein)##NM_182944|NIN|51199|ninein (GSK3B interacting protein)##NM_182946|NIN|51199|ninein (GSK3B interacting protein)##AY311396|ABHD12B|145447|abhydrolase domain containing 12B##AY311397|ABHD12B|145447|abhydrolase domain containing 12B##AY311398|ABHD12B|145447|abhydrolase domain containing 12B##AY311399|ABHD12B|145447|abhydrolase domain containing 12B##BC107141|ABHD12B|145447|abhydrolase domain containing 12B##NM_001206673|ABHD12B|145447|abhydrolase domain containing 12B##NM_181814|ABHD12B|145447|abhydrolase domain containing 12B##BC107142|ABHD12B|145447|abhydrolase domain containing 12B##AK128464|ABHD12B|145447|abhydrolase domain containing 12B##AF046785|PYGL|5836|phosphorylase, glycogen, liver##AF066858|PYGL|5836|phosphorylase, glycogen, liver##AK313206|PYGL|5836|phosphorylase, glycogen, liver##Y15233|PYGL|5836|phosphorylase, glycogen, liver##AK309333|PYGL|5836|phosphorylase, glycogen, liver##BC065011|PYGL|5836|phosphorylase, glycogen, liver##BC110791|PYGL|5836|phosphorylase, glycogen, liver##BC009895|PYGL|5836|phosphorylase, glycogen, liver##BC082229|PYGL|5836|phosphorylase, glycogen, liver##AK225904|PYGL|5836|phosphorylase, glycogen, liver##AK300580|PYGL|5836|phosphorylase, glycogen, liver##BC095850|PYGL|5836|phosphorylase, glycogen, liver##M14636|PYGL|5836|phosphorylase, glycogen, liver##NM_001163940|PYGL|5836|phosphorylase, glycogen, liver##NM_002863|PYGL|5836|phosphorylase, glycogen, liver	0.358034	CTCF.p2:13:0.358
chr15	52519709	52519834	reg1015406.p1	9.481	+	NM_016194	-36207	-	TSC_hg19_v1_chr15_+_52472257 AF007131	-47436	+	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	-47630	-	AF161352 TSC_hg19_v1_chr15_-_52529707	9935	-	AF272390 BC144611 BC064841 TSC_hg19_v1_chr15_-_52587968 AK301079 AK304136 NM_018728	68163	-	TSC_hg19_v1_chr15_-_52821078 AB290180 AK303660 AK307600 NM_000259 NM_001142495 U90942 Y07759	301485	-	NM_016194|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF161352|MYO5C|55930|myosin VC##AF272390|MYO5C|55930|myosin VC##BC144611|MYO5C|55930|myosin VC##BC064841|MYO5C|55930|myosin VC##AK301079|MYO5C|55930|myosin VC##AK304136|MYO5C|55930|myosin VC##NM_018728|MYO5C|55930|myosin VC##AB290180|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK303660|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK307600|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_000259|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_001142495|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##U90942|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##Y07759|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	0.842609	CTCF.p2:-6:0.843
chr8	103540998	103541123	reg1011410.p2	9.481	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-116149	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-289887	-	NM_001040630	-403926	-	NM_024410 AK315276 BC104456 BC104457	22801	+	BC011538 NM_001032282 S81439	125032	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	126872	-	AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001040630|NCALD|83988|neurocalcin delta##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10	0.034007	
chr11	32028477	32028587	reg1012712.p1	9.480	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-189054	-	AB209177 TSC_hg19_v1_chr11_-_31832871 BX640762 NM_000280 NM_001604	-195663	-	BC011953 TSC_hg19_v1_chr11_-_31832790	-195745	-	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	83945	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	84167	+	AK093168 BC032861 NM_001198551 NM_001198552	423828	-	AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AB209177|PAX6|5080|paired box 6##BX640762|PAX6|5080|paired box 6##NM_000280|PAX6|5080|paired box 6##NM_001604|PAX6|5080|paired box 6##BC011953|PAX6|5080|paired box 6##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1	0.979412	CTCF.p2:6:0.979
chr6	56435687	56435813	reg1010412.p2	9.480	+	BC038763 TSC_hg19_v1_chr6_-_56407722	-28042	-	AF330693 TSC_hg19_v1_chr6_-_56258945	-176826	-	TSC_hg19_v1_chr6_-_56112350 BC045597 AF414088 AL136624 AK313398 NM_030820	-323389	-	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	71889	-	TSC_hg19_v1_chr6_-_56708446 U31850	272722	-	AK294830 TSC_hg19_v1_chr6_-_56716493	280702	-	AF330693|COL21A1|81578|collagen, type XXI, alpha 1##BC045597|COL21A1|81578|collagen, type XXI, alpha 1##AF414088|COL21A1|81578|collagen, type XXI, alpha 1##AL136624|COL21A1|81578|collagen, type XXI, alpha 1##AK313398|COL21A1|81578|collagen, type XXI, alpha 1##NM_030820|COL21A1|81578|collagen, type XXI, alpha 1##AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin##U31850|DST|667|dystonin##AK294830|DST|667|dystonin	0.942909	CTCF.p2:-11:0.943
chr2	186144868	186145007	reg1015926.p1	9.479	+	BC136602 TSC_hg19_v1_chr2_+_185463544	-681445	+	BC142612 TSC_hg19_v1_chr2_+_185463319	-681632	+	BC150198 TSC_hg19_v1_chr2_+_185463252 AK131402	-681694	+	NM_173651	458417	+	TSC_hg19_v1_chr2_+_187350986 AF220184 NM_018471 AK298615 AK001901 AK297658 AF289586	1205993	+	TSC_hg19_v1_chr2_+_187351010 BC012336 AF161421 AF109366	1206073	+	BC136602|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A##BC150198|ZNF804A|91752|zinc finger protein 804A##AK131402|ZNF804A|91752|zinc finger protein 804A##NM_173651|FSIP2|401024|fibrous sheath interacting protein 2##AF220184|ZC3H15|55854|zinc finger CCCH-type containing 15##NM_018471|ZC3H15|55854|zinc finger CCCH-type containing 15##AK298615|ZC3H15|55854|zinc finger CCCH-type containing 15##AK001901|ZC3H15|55854|zinc finger CCCH-type containing 15##AK297658|ZC3H15|55854|zinc finger CCCH-type containing 15##AF289586|ZC3H15|55854|zinc finger CCCH-type containing 15##BC012336|ZC3H15|55854|zinc finger CCCH-type containing 15##AF161421|ZC3H15|55854|zinc finger CCCH-type containing 15##AF109366|ZC3H15|55854|zinc finger CCCH-type containing 15	0.010765	
chr3	124487792	124487895	reg1012918.p1	9.479	+	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	-38527	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	-38604	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	-184315	+	TSC_hg19_v1_chr3_-_124605863 AB587397 DQ892778 DQ896025 M35011 AK315429 J05633	118023	-	TSC_hg19_v1_chr3_-_124606213 BC006541 NM_002213 X53002	118368	-	AF286113 AB035807 AY358831 TSC_hg19_v1_chr3_-_124653596 NM_033049	165740	-	AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##DQ892778|ITGB5|3693|integrin, beta 5##DQ896025|ITGB5|3693|integrin, beta 5##M35011|ITGB5|3693|integrin, beta 5##AK315429|ITGB5|3693|integrin, beta 5##J05633|ITGB5|3693|integrin, beta 5##BC006541|ITGB5|3693|integrin, beta 5##NM_002213|ITGB5|3693|integrin, beta 5##X53002|ITGB5|3693|integrin, beta 5##AF286113|MUC13|56667|mucin 13, cell surface associated##AB035807|MUC13|56667|mucin 13, cell surface associated##AY358831|MUC13|56667|mucin 13, cell surface associated##NM_033049|MUC13|56667|mucin 13, cell surface associated	0.086854	
chr19	39703135	39703237	reg1013447.p2	9.477	+	BC039541 AK130951 TSC_hg19_v1_chr19_-_39694904 BC121075 BC121076 NM_001080468	-8288	-	BC092493 AK123941 BC067874 NM_001001414 TSC_hg19_v1_chr19_+_39687603	-15584	+	TSC_hg19_v1_chr19_+_39616436 AK294586 NM_001014831 NM_001014832 NM_001014834 NM_001014835 NM_005884 AK293517 AK291839 AX775863 AX775865 AK300632 BC002921 AX775871 BC034511 AK304651 BC011368 AL834236 AX775867 AX775869 BC025282 AF005046 AB032968	-86741	+	AY184374 HQ258095 AY336714 AY336717 NM_172139 BC130314 BC130316 AY129149	32475	-	BC113581 BC113583 AY129148 DQ126337 NM_172138	55968	+	AY129150 NM_172140 BC117482 BC126183 BC074985 AY336716 HQ258085 AY184372 HQ214053	83826	+	BC039541|SYCN|342898|syncollin##AK130951|SYCN|342898|syncollin##BC121075|SYCN|342898|syncollin##BC121076|SYCN|342898|syncollin##NM_001080468|SYCN|342898|syncollin##BC092493|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##AK123941|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##BC067874|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##NM_001001414|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##AK294586|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014831|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014832|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014834|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014835|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_005884|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK293517|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK291839|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775863|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775865|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK300632|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC002921|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775871|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC034511|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK304651|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC011368|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AL834236|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775867|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775869|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC025282|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AF005046|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AB032968|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AY184374|IL28B|282617|interleukin 28B (interferon, lambda 3)##HQ258095|IL28B|282617|interleukin 28B (interferon, lambda 3)##AY336714|IL28B|282617|interleukin 28B (interferon, lambda 3)##AY336717|IL28B|282617|interleukin 28B (interferon, lambda 3)##NM_172139|IL28B|282617|interleukin 28B (interferon, lambda 3)##BC130314|IL28B|282617|interleukin 28B (interferon, lambda 3)##BC130316|IL28B|282617|interleukin 28B (interferon, lambda 3)##AY129149|IL28B|282617|interleukin 28B (interferon, lambda 3)##BC113581|IL28A|282616|interleukin 28A (interferon, lambda 2)##BC113583|IL28A|282616|interleukin 28A (interferon, lambda 2)##AY129148|IL28A|282616|interleukin 28A (interferon, lambda 2)##DQ126337|IL28A|282616|interleukin 28A (interferon, lambda 2)##NM_172138|IL28A|282616|interleukin 28A (interferon, lambda 2)##AY129150|IL29|282618|interleukin 29 (interferon, lambda 1)##NM_172140|IL29|282618|interleukin 29 (interferon, lambda 1)##BC117482|IL29|282618|interleukin 29 (interferon, lambda 1)##BC126183|IL29|282618|interleukin 29 (interferon, lambda 1)##BC074985|IL29|282618|interleukin 29 (interferon, lambda 1)##AY336716|IL29|282618|interleukin 29 (interferon, lambda 1)##HQ258085|IL29|282618|interleukin 29 (interferon, lambda 1)##AY184372|IL29|282618|interleukin 29 (interferon, lambda 1)##HQ214053|IL29|282618|interleukin 29 (interferon, lambda 1)	0.616647	CTCF.p2:-7:0.617
chr19	46196704	46196811	reg1012350.p1	9.477	+	TSC_hg19_v1_chr19_+_46195931 AK000091 AK172764 AK222636 BC011553 AB528634	-829	+	NM_001163377 NM_017659	-1017	+	NM_004597 NM_177542	-1315	-	TSC_hg19_v1_chr19_-_46220589 AK091414 AX746967	23856	-	TSC_hg19_v1_chr19_-_46234155 NM_001080469	37390	-	AB464211 TSC_hg19_v1_chr19_-_46272110	75358	-	AK000091|QPCTL|54814|glutaminyl-peptide cyclotransferase-like##AK172764|QPCTL|54814|glutaminyl-peptide cyclotransferase-like##AK222636|QPCTL|54814|glutaminyl-peptide cyclotransferase-like##BC011553|QPCTL|54814|glutaminyl-peptide cyclotransferase-like##NM_001163377|QPCTL|54814|glutaminyl-peptide cyclotransferase-like##NM_017659|QPCTL|54814|glutaminyl-peptide cyclotransferase-like##NM_004597|SNRPD2|6633|small nuclear ribonucleoprotein D2 polypeptide 16.5kDa##NM_177542|SNRPD2|6633|small nuclear ribonucleoprotein D2 polypeptide 16.5kDa##NM_001080469|FBXO46|23403|F-box protein 46	0.996584	CTCF.p2:7:0.997
chr2	86057916	86058045	reg1015762.p1	9.477	+	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-76975	+	NM_006433 NM_012483 X54101 AK310057 AK311537 AK311012 AK311657 BC063245 AK304728 TSC_hg19_v1_chr2_+_85921514 DQ892267 DQ895468 BC023576 CR541859 X05044	-136500	+	NM_000542 NM_198843	-162117	-	AY152815 NM_001042437	36812	-	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	58106	-	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	275003	-	NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##NM_006433|GNLY|10578|granulysin##NM_012483|GNLY|10578|granulysin##X54101|GNLY|10578|granulysin##AK310057|GNLY|10578|granulysin##AK311537|GNLY|10578|granulysin##AK311012|GNLY|10578|granulysin##AK311657|GNLY|10578|granulysin##BC063245|GNLY|10578|granulysin##AK304728|GNLY|10578|granulysin##DQ892267|GNLY|10578|granulysin##DQ895468|GNLY|10578|granulysin##BC023576|GNLY|10578|granulysin##CR541859|GNLY|10578|granulysin##X05044|GNLY|10578|granulysin##NM_000542|SFTPB|6439|surfactant protein B##NM_198843|SFTPB|6439|surfactant protein B##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa	0.974601	CTCF.p2:-4:0.975
chr4	128653910	128654049	reg1016107.p1	9.477	+	TSC_hg19_v1_chr4_+_128651573 NM_031291 AL136857 AY550240 BC022032 AB528294 AM393262 CU692468 AJ863129	-2370	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	-99840	+	NM_024582	-2416413	+	TSC_hg19_v1_chr4_+_128703445 BC040560 NM_014278	49454	+	TSC_hg19_v1_chr4_+_128703476 AK027822 AK307464	49497	+	TSC_hg19_v1_chr4_+_128703491 AY290862 AB023421 EF197155	49613	+	NM_031291|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AL136857|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AY550240|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC022032|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AM393262|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AJ863129|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##BC040560|HSPA4L|22824|heat shock 70kDa protein 4-like##NM_014278|HSPA4L|22824|heat shock 70kDa protein 4-like##AK027822|HSPA4L|22824|heat shock 70kDa protein 4-like##AK307464|HSPA4L|22824|heat shock 70kDa protein 4-like##AY290862|HSPA4L|22824|heat shock 70kDa protein 4-like##AB023421|HSPA4L|22824|heat shock 70kDa protein 4-like##EF197155|HSPA4L|22824|heat shock 70kDa protein 4-like	0.990481	CTCF.p2:3:0.990
chr7	114303698	114303852	reg1012078.p2	9.477	+	AF467253 NM_001172767 NM_148899 U80741 AF467258 AF467259 TSC_hg19_v1_chr7_+_114066703	-237145	+	TSC_hg19_v1_chr7_+_114055253 AF493430 AF337817 AF467257 BC126104 BC143866 BC143867	-248470	+	AK296957 TSC_hg19_v1_chr7_+_114055213	-248583	+	TSC_hg19_v1_chr7_+_114562148 AF054589 NM_001166345 NM_001166346 NM_199072	258399	+	BC040713 TSC_hg19_v1_chr7_+_114562979 AY196485	259181	+	AJ608795 NM_001244583	1304591	-	AF467253|FOXP2|93986|forkhead box P2##NM_001172767|FOXP2|93986|forkhead box P2##NM_148899|FOXP2|93986|forkhead box P2##AF467258|FOXP2|93986|forkhead box P2##AF467259|FOXP2|93986|forkhead box P2##AF493430|FOXP2|93986|forkhead box P2##AF337817|FOXP2|93986|forkhead box P2##AF467257|FOXP2|93986|forkhead box P2##BC126104|FOXP2|93986|forkhead box P2##BC143866|FOXP2|93986|forkhead box P2##BC143867|FOXP2|93986|forkhead box P2##AK296957|FOXP2|93986|forkhead box P2##AF054589|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166345|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166346|MDFIC|29969|MyoD family inhibitor domain containing##NM_199072|MDFIC|29969|MyoD family inhibitor domain containing##BC040713|MDFIC|29969|MyoD family inhibitor domain containing##AY196485|MDFIC|29969|MyoD family inhibitor domain containing##AJ608795|TFEC|22797|transcription factor EC##NM_001244583|TFEC|22797|transcription factor EC	0.0	
chr9	100797147	100797266	reg1013174.p1	9.477	+	TSC_hg19_v1_chr9_+_100745672 Y07569	-51479	+	TSC_hg19_v1_chr9_+_100745652 BC019658 Y07570 BC013003	-51554	+	TSC_hg19_v1_chr9_+_100745633 AK223454 AK313733 U70439	-51593	+	TSC_hg19_v1_chr9_+_100819020 NM_018946 AK316608 BC000008 AK001659 BC019315 AF257466 CU676426 DQ892167 DQ895361	21809	+	TSC_hg19_v1_chr9_-_100881503 AB529155 DQ893293 DQ896623 AF220130 AF220131 D50919 NM_014788 NM_033219 BC006333 NM_033220 AK292825	84279	-	TSC_hg19_v1_chr9_-_100881526 AK055833	84338	-	Y07569|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##BC019658|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##Y07570|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##BC013003|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##AK223454|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##AK313733|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##U70439|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##NM_018946|NANS|54187|N-acetylneuraminic acid synthase##AK316608|NANS|54187|N-acetylneuraminic acid synthase##BC000008|NANS|54187|N-acetylneuraminic acid synthase##AK001659|NANS|54187|N-acetylneuraminic acid synthase##BC019315|NANS|54187|N-acetylneuraminic acid synthase##AF257466|NANS|54187|N-acetylneuraminic acid synthase##DQ892167|NANS|54187|N-acetylneuraminic acid synthase##DQ895361|NANS|54187|N-acetylneuraminic acid synthase##DQ893293|TRIM14|9830|tripartite motif containing 14##DQ896623|TRIM14|9830|tripartite motif containing 14##AF220130|TRIM14|9830|tripartite motif containing 14##AF220131|TRIM14|9830|tripartite motif containing 14##D50919|TRIM14|9830|tripartite motif containing 14##NM_014788|TRIM14|9830|tripartite motif containing 14##NM_033219|TRIM14|9830|tripartite motif containing 14##BC006333|TRIM14|9830|tripartite motif containing 14##NM_033220|TRIM14|9830|tripartite motif containing 14##AK292825|TRIM14|9830|tripartite motif containing 14##AK055833|TRIM14|9830|tripartite motif containing 14	0.999772	CTCF.p2:-15:1.000
chr11	44642833	44642961	reg1011576.p1	9.476	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-55670	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-55732	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-311221	-	NM_130783	143078	+	TSC_hg19_v1_chr11_-_44956087 AF010315	313210	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	329520	-	AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_130783|TSPAN18|90139|tetraspanin 18##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11	0.884644	CTCF.p2:-31:0.885
chr17	21353367	21353469	reg1014212.p1	9.474	+	FJ434338 NM_001194958	-44971	+	TSC_hg19_v1_chr17_+_21279667 BC027982 NM_021012	-73736	+	NM_002756	-162071	+	TSC_hg19_v1_chr17_-_21454933 AK056436 BC132738 BC136630 BC019938 BC010612 BC052777 BC053952 NM_001113434	101505	-	NM_001190452	669018	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	4267704	+	FJ434338|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##NM_001194958|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##BC027982|KCNJ12|3768|potassium inwardly-rectifying channel, subfamily J, member 12##NM_021012|KCNJ12|3768|potassium inwardly-rectifying channel, subfamily J, member 12##NM_002756|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK056436|C17orf51|339263|chromosome 17 open reading frame 51##BC132738|C17orf51|339263|chromosome 17 open reading frame 51##BC136630|C17orf51|339263|chromosome 17 open reading frame 51##BC019938|C17orf51|339263|chromosome 17 open reading frame 51##BC010612|C17orf51|339263|chromosome 17 open reading frame 51##BC052777|C17orf51|339263|chromosome 17 open reading frame 51##BC053952|C17orf51|339263|chromosome 17 open reading frame 51##NM_001113434|C17orf51|339263|chromosome 17 open reading frame 51##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1	0.990444	CTCF.p2:5:0.990
chr3	162774806	162774930	reg1013685.p1	9.474	+	NM_001080440	-1560273	+	AF458592 BC037817 NM_001040100	-1685060	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-1835747	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	2021410	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	2139637	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	2780325	-	NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase	0.998978	CTCF.p2:1:0.999
chr5	148944447	148944572	reg1012990.p1	9.474	+	TSC_hg19_v1_chr5_-_148931006 NM_001025105 NM_001892	-13503	-	TSC_hg19_v1_chr5_-_148930950 AK294942	-13543	-	AF218004 TSC_hg19_v1_chr5_-_148930935 AK303794 BC021971 BC025371 BC007246	-13585	-	AK300559 AK316002 BC041325 NM_001001669	16575	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	165318	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	165367	+	NM_001025105|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001892|CSNK1A1|1452|casein kinase 1, alpha 1##AK294942|CSNK1A1|1452|casein kinase 1, alpha 1##AF218004|CSNK1A1|1452|casein kinase 1, alpha 1##AK303794|CSNK1A1|1452|casein kinase 1, alpha 1##BC021971|CSNK1A1|1452|casein kinase 1, alpha 1##BC025371|CSNK1A1|1452|casein kinase 1, alpha 1##BC007246|CSNK1A1|1452|casein kinase 1, alpha 1##AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	0.981805	CTCF.p2:-6:0.982
chr7	133826128	133826270	reg1014389.p1	9.474	+	BC104897 BC104899 AK057348 NM_144648	-14122	+	TSC_hg19_v1_chr7_+_132937838 NM_001037126 NM_021807 AF380839 AK027688 AL831989 AK298191 BC067263 BC026174 CU693148 AB051486	-888350	+	TSC_hg19_v1_chr7_-_132766851 BC011596 BC014839 AK129533	-1059353	-	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	175424	-	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	175588	-	TSC_hg19_v1_chr7_-_134143853 AB209796 BT019859 CR450351 CR542203 CU675153 J04795 DQ890758 DQ892546 DQ893921 DQ895757 M34720 AF328729 J05474 J05017 BC010391 BC005387 X15414	317634	-	BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_001037126|EXOC4|60412|exocyst complex component 4##NM_021807|EXOC4|60412|exocyst complex component 4##AF380839|EXOC4|60412|exocyst complex component 4##AK027688|EXOC4|60412|exocyst complex component 4##AL831989|EXOC4|60412|exocyst complex component 4##AK298191|EXOC4|60412|exocyst complex component 4##BC067263|EXOC4|60412|exocyst complex component 4##BC026174|EXOC4|60412|exocyst complex component 4##AB051486|EXOC4|60412|exocyst complex component 4##BC011596|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC014839|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK129533|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4##AB209796|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BT019859|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR450351|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR542203|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J04795|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ890758|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ892546|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ893921|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ895757|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##M34720|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF328729|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05474|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05017|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC010391|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC005387|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##X15414|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)	0.998835	CTCF.p2:13:0.999
chr1	99259994	99260090	reg1011654.p1	9.473	+	TSC_hg19_v1_chr1_+_99127278 NM_015976 NM_152238 AK025031 AK223229 AL049989 AF121857 AK298211 BC018105 BC010349	-132734	+	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	-873436	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	-873483	-	BC040174 AK295688 BC140086 BC143086 AY634620 BC136350 BC144000 AY574039 FJ472844 NM_001010861 NM_001037317	210270	-	AF541281 NM_001166252 NM_014839 AB007924 AK056665 AY304518 AB384482 BC042963 TSC_hg19_v1_chr1_+_99730047 AK291369 AK297417	469908	+	TSC_hg19_v1_chr1_+_99730067 AF357013 AK300361	470043	+	NM_015976|SNX7|51375|sorting nexin 7##NM_152238|SNX7|51375|sorting nexin 7##AK025031|SNX7|51375|sorting nexin 7##AK223229|SNX7|51375|sorting nexin 7##AL049989|SNX7|51375|sorting nexin 7##AF121857|SNX7|51375|sorting nexin 7##AK298211|SNX7|51375|sorting nexin 7##BC018105|SNX7|51375|sorting nexin 7##BC010349|SNX7|51375|sorting nexin 7##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##BC040174|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AK295688|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC140086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC143086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY634620|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC136350|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC144000|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY574039|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##FJ472844|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001010861|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001037317|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AF357013|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK300361|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	0.607236	CTCF.p2:-17:0.607
chr20	33733034	33733146	reg1012986.p1	9.473	+	TSC_hg19_v1_chr20_-_33680611 AK298958 AK303476 AK315582 NM_015638 NM_199368	-52450	-	TSC_hg19_v1_chr20_-_33680600 AK074106	-52494	-	TSC_hg19_v1_chr20_-_33680592 AB590540 CU680522 BC013144	-52618	-	AK096016 AK298794 TSC_hg19_v1_chr20_-_33734933	1823	-	CR457266 CU674674 TSC_hg19_v1_chr20_-_33735112 BC016184 AK300212 AY358580 BC001371 AK023931 AK303816 AK001645 NM_001145025 NM_018217	2034	-	AK314887 NM_006404 BC014451 X89079 L35545 CR456948 DQ892834 DQ896081	26775	+	AK298958|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK303476|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK315582|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##NM_015638|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##NM_199368|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK074106|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##BC013144|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK096016|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK298794|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##CR457266|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##BC016184|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK300212|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AY358580|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##BC001371|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK023931|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK303816|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK001645|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##NM_001145025|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##NM_018217|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK314887|PROCR|10544|protein C receptor, endothelial##NM_006404|PROCR|10544|protein C receptor, endothelial##BC014451|PROCR|10544|protein C receptor, endothelial##X89079|PROCR|10544|protein C receptor, endothelial##L35545|PROCR|10544|protein C receptor, endothelial##CR456948|PROCR|10544|protein C receptor, endothelial##DQ892834|PROCR|10544|protein C receptor, endothelial##DQ896081|PROCR|10544|protein C receptor, endothelial	0.0	
chr5	157189122	157189243	reg1010687.p1	9.473	+	AK055297 TSC_hg19_v1_chr5_+_157184422	-4802	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-18442	+	AY463216 NM_017872 TSC_hg19_v1_chr5_+_157158427 AK000553 AK223119 AK304590 BC023521 AL136669 AK021663 AB528251 AM392629 CR533503 BC001523 BC001852 CU674750	-30754	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	96908	-	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	1337275	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	1337560	-	BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AY463216|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##NM_017872|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK000553|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK223119|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK304590|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC023521|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AL136669|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK021663|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##CR533503|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001523|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001852|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1	0.99957	CTCF.p2:-8:1.000
chr5	24633959	24634107	reg1015009.p1	9.473	+	DQ388610 NM_020227 AK301776	-1126290	+	L33477 NM_004061	-1780303	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-1780587	-	NM_006727	11051	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	2404638	-	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	2838370	+	DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401	0.960992	CTCF.p2:-3:0.961
chr9	92981929	92982039	reg1012029.p1	9.473	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-762003	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-868977	-	BC054500 NM_001142287 NM_006378	-887374	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	423135	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	582052	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	582083	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.012377	
chrX	19757913	19758042	reg1013204.p1	9.473	+	TSC_hg19_v1_chrX_-_19689029 AK293237 NM_001184960	-68921	-	NM_001001671	-224599	-	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	-395895	+	AK293234 AF542051 TSC_hg19_v1_chrX_-_19817892	59898	-	TSC_hg19_v1_chrX_-_19817907 NM_001024666	59935	-	TSC_hg19_v1_chrX_-_19905450 AY542305	147486	-	AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001001671|MAP3K15|389840|mitogen-activated protein kinase kinase kinase 15##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001024666|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY542305|SH3KBP1|30011|SH3-domain kinase binding protein 1	0.989332	CTCF.p2:-6:0.989
chr14	59106740	59106880	reg1012815.p1	9.472	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-2064	+	AK302579 NM_001244193 AK310356 AK302718	-200384	+	NM_014749 BC066647	-212079	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	548594	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	825112	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	825246	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.534479	CTCF.p2:-3:0.534
chr16	74343818	74343929	reg1010389.p1	9.472	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	-13102	+	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	-13180	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-1251287	-	TSC_hg19_v1_chr16_-_74401811 AK124154	57939	-	TSC_hg19_v1_chr16_-_74402059 BC037579 AK096768	58225	-	AK074773 AY358373 AK293982 NM_001011880 AL833339 AF448856	111467	-	D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##BC037579|LOC283922|283922|pyruvate dehydrogenase phosphatase regulatory subunit pseudogene##AK096768|LOC283922|283922|pyruvate dehydrogenase phosphatase regulatory subunit pseudogene##AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##AY358373|CLEC18B|497190|C-type lectin domain family 18, member B##AK293982|CLEC18B|497190|C-type lectin domain family 18, member B##NM_001011880|CLEC18B|497190|C-type lectin domain family 18, member B##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AF448856|CLEC18C|283971|C-type lectin domain family 18, member C	0.912396	CTCF.p2:4:0.912
chr17	17633094	17633228	reg1015573.p1	9.472	+	TSC_hg19_v1_chr17_+_17608164 AF147359	-24963	+	TSC_hg19_v1_chr17_+_17584772 AB058723 AY172136 NM_030665	-48376	+	TSC_hg19_v1_chr17_-_17495007 CU690728 AF044214 AF113126 BC000557 BC050593 NM_148172 AK302251	-138186	-	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	93743	-	TSC_hg19_v1_chr17_-_17740301 U00968 BC063281	107134	-	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	107163	-	AB058723|RAI1|10743|retinoic acid induced 1##AY172136|RAI1|10743|retinoic acid induced 1##NM_030665|RAI1|10743|retinoic acid induced 1##AF044214|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF113126|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC000557|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC050593|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_148172|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AK302251|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1##U00968|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC063281|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1	0.738369	CTCF.p2:3:0.738
chr2	72364731	72364851	reg1014452.p1	9.472	+	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-670898	+	NM_001130976 NM_001130977 NM_001130978 NM_001130979 NM_001130980 NM_001130981 NM_003494 AF075575 BC171803 EU515155 EU515156 EU515157 EU515158 EU515159 EU515160	-683990	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	-805894	+	AK295683 TSC_hg19_v1_chr2_-_72371202	6408	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	10151	-	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	688313	-	DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130976|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130977|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130978|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130979|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130980|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130981|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_003494|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AF075575|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##BC171803|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515155|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515156|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515157|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515158|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515159|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515160|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B	0.355816	CTCF.p2:-13:0.356
chr15	56138435	56138545	reg1012685.p1	9.471	+	AY630258 NM_173814 TSC_hg19_v1_chr15_-_56035276	-103264	-	AF457207 NM_015617	-257441	-	EF625686 TSC_hg19_v1_chr15_-_55880544	-257958	-	BC136605 BC144284 BC144285 AL832063 NM_198400	70826	-	TSC_hg19_v1_chr15_-_56285776 BC035707 AK304394 AY550969 BC152452 BC152562 D42055 NM_006154	147305	-	TSC_hg19_v1_chr15_-_56388663 AL832584	250207	-	AY630258|PRTG|283659|protogenin##NM_173814|PRTG|283659|protogenin##AF457207|PYGO1|26108|pygopus homolog 1 (Drosophila)##NM_015617|PYGO1|26108|pygopus homolog 1 (Drosophila)##EF625686|PYGO1|26108|pygopus homolog 1 (Drosophila)##BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832584|RFX7|64864|regulatory factor X, 7	0.653747	CTCF.p2:6:0.637
chr5	108815069	108815226	reg1013666.p1	9.471	+	BC030826 AB007898 TSC_hg19_v1_chr5_-_108745619 AK291759 NM_014819	-69526	-	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	-730475	+	AK293376 J03358 NM_005246 AK296874	-731585	+	TSC_hg19_v1_chr5_+_109025072 BC031659	209917	+	TSC_hg19_v1_chr5_+_109025096 BC111062	209950	+	TSC_hg19_v1_chr5_+_109025138 NM_002372	209998	+	BC030826|PJA2|9867|praja ring finger 2##AB007898|PJA2|9867|praja ring finger 2##AK291759|PJA2|9867|praja ring finger 2##NM_014819|PJA2|9867|praja ring finger 2##AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1	0.921451	CTCF.p2:8:0.921
chr5	1763882	1764007	reg1012254.p1	9.471	+	TSC_hg19_v1_chr5_-_1634100 BC019918 BC045555 AK311210 AK311251	-129826	-	TSC_hg19_v1_chr5_-_1634097 BC020552 BC053586 BC044220 AK308990 AK315872 BC067863 BC014604 AK307076	-129875	-	TSC_hg19_v1_chr5_-_1594617 BC150558	-169313	-	TSC_hg19_v1_chr5_-_1799926 AB049654 AF151109 AF155653 BC020642	35979	-	TSC_hg19_v1_chr5_-_1799952 AK312001 BC104652 EF036487 NM_032479	36028	-	TSC_hg19_v1_chr5_+_1801520 NM_004553 AK022503 BC038664 AF044959 BC046155 CR456880 HQ257915	37568	+	BC019918|LOC728613|728613|programmed cell death 6 pseudogene##BC045555|LOC728613|728613|programmed cell death 6 pseudogene##AK311210|LOC728613|728613|programmed cell death 6 pseudogene##BC020552|LOC728613|728613|programmed cell death 6 pseudogene##BC053586|LOC728613|728613|programmed cell death 6 pseudogene##BC044220|LOC728613|728613|programmed cell death 6 pseudogene##AK308990|LOC728613|728613|programmed cell death 6 pseudogene##BC067863|LOC728613|728613|programmed cell death 6 pseudogene##BC014604|LOC728613|728613|programmed cell death 6 pseudogene##AK307076|LOC728613|728613|programmed cell death 6 pseudogene##BC150558|SDHAP3|728609|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3##AB049654|MRPL36|64979|mitochondrial ribosomal protein L36##AF151109|MRPL36|64979|mitochondrial ribosomal protein L36##AF155653|MRPL36|64979|mitochondrial ribosomal protein L36##BC020642|MRPL36|64979|mitochondrial ribosomal protein L36##AK312001|MRPL36|64979|mitochondrial ribosomal protein L36##BC104652|MRPL36|64979|mitochondrial ribosomal protein L36##EF036487|MRPL36|64979|mitochondrial ribosomal protein L36##NM_032479|MRPL36|64979|mitochondrial ribosomal protein L36##NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	0.0	
chr5	23139858	23139966	reg1009456.p2	9.471	+	L33477 NM_004061	-286182	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-286466	-	TSC_hg19_v1_chr5_-_22212879 AK314800	-927031	-	DQ388610 NM_020227 AK301776	367831	+	NM_006727	1505172	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	3898759	-	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	0.256494	CTCF.p2:-1:0.256
chr11	4203463	4203557	reg1012160.p1	9.470	+	TSC_hg19_v1_chr11_+_4116085 AK297988 BC006498 CU675435 DQ893028 DQ896272	-87351	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	-87444	+	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	-87521	+	BC140928 NM_001005161	186105	-	TSC_hg19_v1_chr11_-_4414904 BC010861 M62800 AK225564 NM_003141	211396	-	BC137247 BC137248 NM_001005172	267014	+	AK297988|RRM1|6240|ribonucleotide reductase M1##BC006498|RRM1|6240|ribonucleotide reductase M1##DQ893028|RRM1|6240|ribonucleotide reductase M1##DQ896272|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##BC140928|OR52B4|143496|olfactory receptor, family 52, subfamily B, member 4##NM_001005161|OR52B4|143496|olfactory receptor, family 52, subfamily B, member 4##BC010861|TRIM21|6737|tripartite motif containing 21##M62800|TRIM21|6737|tripartite motif containing 21##AK225564|TRIM21|6737|tripartite motif containing 21##NM_003141|TRIM21|6737|tripartite motif containing 21##BC137247|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##BC137248|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##NM_001005172|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2	1.103854	CTCF.p2:-2:0.995
chr8	53649815	53649943	reg1011483.p1	9.470	+	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	-22866	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	-22893	-	BC130641 BC130643 BC144534 AY358213 NM_207413	-171886	-	BC069117 BC107101 NM_005285	202588	+	BC099912 AK310407 AY168006 NM_000912 AY466378	514333	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	1105800	-	AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1##BC130641|FAM150A|389658|family with sequence similarity 150, member A##BC130643|FAM150A|389658|family with sequence similarity 150, member A##BC144534|FAM150A|389658|family with sequence similarity 150, member A##AY358213|FAM150A|389658|family with sequence similarity 150, member A##NM_207413|FAM150A|389658|family with sequence similarity 150, member A##BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1##BC099912|OPRK1|4986|opioid receptor, kappa 1##AK310407|OPRK1|4986|opioid receptor, kappa 1##AY168006|OPRK1|4986|opioid receptor, kappa 1##NM_000912|OPRK1|4986|opioid receptor, kappa 1##AY466378|OPRK1|4986|opioid receptor, kappa 1##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H	0.616917	CTCF.p2:-23:0.617
chr6	111200455	111200602	reg1013203.p1	9.469	+	AK302761 NM_001634 TSC_hg19_v1_chr6_+_111195987 AK300330 AL832698 BX640599 NM_001033059 AJ420527 M21154	-4506	+	TSC_hg19_v1_chr6_-_111136673 BC024247	-63802	-	TSC_hg19_v1_chr6_-_111136507 AY028424	-64014	-	AF361492 AF361496 NM_138408 BC104655 TSC_hg19_v1_chr6_+_111279890	79302	+	BC011593 TSC_hg19_v1_chr6_+_111279945 AK057977 EF137904	79430	+	AK292165 TSC_hg19_v1_chr6_+_111303240 AK024740 AK301662 AL833613 BC005347 BC035314 NM_032194 CU690066	102746	+	AK302761|AMD1|262|adenosylmethionine decarboxylase 1##NM_001634|AMD1|262|adenosylmethionine decarboxylase 1##AK300330|AMD1|262|adenosylmethionine decarboxylase 1##AL832698|AMD1|262|adenosylmethionine decarboxylase 1##BX640599|AMD1|262|adenosylmethionine decarboxylase 1##NM_001033059|AMD1|262|adenosylmethionine decarboxylase 1##AJ420527|AMD1|262|adenosylmethionine decarboxylase 1##M21154|AMD1|262|adenosylmethionine decarboxylase 1##BC024247|CDK19|23097|cyclin-dependent kinase 19##AY028424|CDK19|23097|cyclin-dependent kinase 19##AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##BC011593|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AK057977|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##EF137904|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AK292165|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK024740|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK301662|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AL833613|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC005347|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC035314|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##NM_032194|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)	0.969229	CTCF.p2:1:0.969
chr1	54535884	54535997	reg1013324.p2	9.468	+	AK096488 AK056674 NM_153035 BC035374	-16641	+	AK075187 TSC_hg19_v1_chr1_-_54519086 AK074636 AF290615 AX775907 NM_004872	-16853	-	TSC_hg19_v1_chr1_-_54518929 AY359029	-17018	-	NM_201546	83502	-	TSC_hg19_v1_chr1_-_54665704 BC012781 BC038388 AK090456 BC071735 BC064419 AK122760 NM_001031672	129767	-	AK024572 NM_016491 TSC_hg19_v1_chr1_+_54665839	129902	+	AK096488|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##AK056674|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##NM_153035|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##BC035374|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##AK075187|TMEM59|9528|transmembrane protein 59##AF290615|TMEM59|9528|transmembrane protein 59##AX775907|TMEM59|9528|transmembrane protein 59##NM_004872|TMEM59|9528|transmembrane protein 59##AY359029|TMEM59|9528|transmembrane protein 59##NM_201546|CDCP2|200008|CUB domain containing protein 2##BC012781|CYB5RL|606495|cytochrome b5 reductase-like##BC038388|CYB5RL|606495|cytochrome b5 reductase-like##AK090456|CYB5RL|606495|cytochrome b5 reductase-like##BC071735|CYB5RL|606495|cytochrome b5 reductase-like##BC064419|CYB5RL|606495|cytochrome b5 reductase-like##NM_001031672|CYB5RL|606495|cytochrome b5 reductase-like##AK024572|MRPL37|51253|mitochondrial ribosomal protein L37##NM_016491|MRPL37|51253|mitochondrial ribosomal protein L37	1.956917	CTCF.p2:-22:0.953	CTCF.p2:26:0.992
chr3	38537681	38537784	reg1011466.p1	9.468	+	TSC_hg19_v1_chr3_+_38495787 NM_001106 BC096243 BC096244 BC096245 BC099642 X77533	-41939	+	TSC_hg19_v1_chr3_+_38388298 AK025728 AK314386 BC030231 BC137076 BC137080 AK293325	-149391	+	TSC_hg19_v1_chr3_+_38388288 BC052984	-149442	+	TSC_hg19_v1_chr3_+_38537830 AK290107 NM_001145464 NM_005107 AB020523 BC104213 BC104212 AK301067 AK308814	63	+	BC015820 TSC_hg19_v1_chr3_+_38537851 BC065368 AK023235 AK289602	118	+	TSC_hg19_v1_chr3_+_38537982 AK315814	248	+	NM_001106|ACVR2B|93|activin A receptor, type IIB##BC096243|ACVR2B|93|activin A receptor, type IIB##BC096244|ACVR2B|93|activin A receptor, type IIB##BC096245|ACVR2B|93|activin A receptor, type IIB##BC099642|ACVR2B|93|activin A receptor, type IIB##X77533|ACVR2B|93|activin A receptor, type IIB##AK025728|XYLB|9942|xylulokinase homolog (H. influenzae)##AK314386|XYLB|9942|xylulokinase homolog (H. influenzae)##BC030231|XYLB|9942|xylulokinase homolog (H. influenzae)##BC137076|XYLB|9942|xylulokinase homolog (H. influenzae)##BC137080|XYLB|9942|xylulokinase homolog (H. influenzae)##AK293325|XYLB|9942|xylulokinase homolog (H. influenzae)##BC052984|XYLB|9942|xylulokinase homolog (H. influenzae)##AK290107|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##NM_001145464|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##NM_005107|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AB020523|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC104213|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC104212|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK301067|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK308814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC015820|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC065368|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK023235|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK289602|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK315814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like	0.707429	CTCF.p2:11:0.707
chr4	155947336	155947437	reg1011401.p1	9.468	+	NM_144979 AK302720 BC028588	-244924	+	TSC_hg19_v1_chr4_+_155665151 AY546085 AY546086 NM_004744 AF071510	-282170	+	TSC_hg19_v1_chr4_+_155665114 AK292598	-282268	+	NM_000910 U42766	182394	+	TSC_hg19_v1_chr4_-_156297959 BC022852	350569	-	TSC_hg19_v1_chr4_-_156297990 AK301075 BC146864 BC128540 BC128541 BC056683	350622	-	NM_144979|RBM46|166863|RNA binding motif protein 46##AK302720|RBM46|166863|RNA binding motif protein 46##BC028588|RBM46|166863|RNA binding motif protein 46##AY546085|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AY546086|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_004744|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AF071510|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AK292598|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_000910|NPY2R|4887|neuropeptide Y receptor Y2##U42766|NPY2R|4887|neuropeptide Y receptor Y2##BC022852|MAP9|79884|microtubule-associated protein 9##AK301075|MAP9|79884|microtubule-associated protein 9##BC146864|MAP9|79884|microtubule-associated protein 9##BC128540|MAP9|79884|microtubule-associated protein 9##BC128541|MAP9|79884|microtubule-associated protein 9##BC056683|MAP9|79884|microtubule-associated protein 9	0.0	
chrX	153279189	153279321	reg1015759.p1	9.468	+	NM_003492	-41265	+	TSC_hg19_v1_chrX_-_153236650 L20010 BC063435 NM_005334	-42536	-	BC010606 TSC_hg19_v1_chrX_-_153218266	-61043	-	AF346607 DQ054788 AM392624 AM393211 EU831427 EU831520 AB463802 TSC_hg19_v1_chrX_-_153285300 BC014963	6040	-	TSC_hg19_v1_chrX_-_153285340 BC054000 L76191 NM_001025242 NM_001025243 NM_001569	6082	-	BC062546 TSC_hg19_v1_chrX_-_153363132 AF158180 AY541280	83805	-	NM_003492|TMEM187|8269|transmembrane protein 187##L20010|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##BC063435|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##NM_005334|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##BC010606|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##AF346607|IRAK1|3654|interleukin-1 receptor-associated kinase 1##DQ054788|IRAK1|3654|interleukin-1 receptor-associated kinase 1##AM392624|IRAK1|3654|interleukin-1 receptor-associated kinase 1##AM393211|IRAK1|3654|interleukin-1 receptor-associated kinase 1##EU831427|IRAK1|3654|interleukin-1 receptor-associated kinase 1##EU831520|IRAK1|3654|interleukin-1 receptor-associated kinase 1##BC014963|IRAK1|3654|interleukin-1 receptor-associated kinase 1##BC054000|IRAK1|3654|interleukin-1 receptor-associated kinase 1##L76191|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_001025242|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_001025243|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_001569|IRAK1|3654|interleukin-1 receptor-associated kinase 1##BC062546|LOC728653|728653|uncharacterized LOC728653##AF158180|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##AY541280|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)	0.992548	CTCF.p2:-8:0.993
chr15	91361973	91362107	reg1013953.p1	9.467	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	-101426	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-288844	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-430501	+	NM_002569 X17094	49844	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	65661	+	DQ891350 DQ894530 AB590559 AY513654 AY513655 AY513656 AY513657 NM_001143783 NM_001143784	66233	+	BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene##DQ891350|FES|2242|feline sarcoma oncogene##DQ894530|FES|2242|feline sarcoma oncogene##AY513654|FES|2242|feline sarcoma oncogene##AY513655|FES|2242|feline sarcoma oncogene##AY513656|FES|2242|feline sarcoma oncogene##AY513657|FES|2242|feline sarcoma oncogene##NM_001143783|FES|2242|feline sarcoma oncogene##NM_001143784|FES|2242|feline sarcoma oncogene	0.657896	CTCF.p2:18:0.658
chr19	51762746	51762853	reg1011405.p2	9.467	+	AK097554 NM_173635	-1836	+	BC028152 AK304810 TSC_hg19_v1_chr19_+_51728370 AB590304 DQ891726 DQ894903	-34428	+	AK293934 TSC_hg19_v1_chr19_+_51728362 NM_001082618 NM_001177608 NM_001772 AK309558 M23197 AY162464	-34456	+	TSC_hg19_v1_chr19_+_51815095 NM_001101372	52299	+	BC131493 NM_001163922	82578	-	TSC_hg19_v1_chr19_-_51858044 AF370381 AK055285 NM_001014763	95269	-	AK097554|C19orf75|284369|chromosome 19 open reading frame 75##NM_173635|C19orf75|284369|chromosome 19 open reading frame 75##BC028152|CD33|945|CD33 molecule##AK304810|CD33|945|CD33 molecule##DQ891726|CD33|945|CD33 molecule##DQ894903|CD33|945|CD33 molecule##AK293934|CD33|945|CD33 molecule##NM_001082618|CD33|945|CD33 molecule##NM_001177608|CD33|945|CD33 molecule##NM_001772|CD33|945|CD33 molecule##AK309558|CD33|945|CD33 molecule##M23197|CD33|945|CD33 molecule##AY162464|CD33|945|CD33 molecule##NM_001101372|IGLON5|402665|IgLON family member 5##BC131493|VSIG10L|147645|V-set and immunoglobulin domain containing 10 like##NM_001163922|VSIG10L|147645|V-set and immunoglobulin domain containing 10 like##AF370381|ETFB|2109|electron-transfer-flavoprotein, beta polypeptide##AK055285|ETFB|2109|electron-transfer-flavoprotein, beta polypeptide##NM_001014763|ETFB|2109|electron-transfer-flavoprotein, beta polypeptide	0.643983	CTCF.p2:1:0.644
chr5	173052821	173052964	reg1015722.p1	9.467	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-9219	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-9264	-	BC003114 TSC_hg19_v1_chr5_-_173043602	-9295	-	TSC_hg19_v1_chr5_+_173315343 NM_030627	262486	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	363298	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	419819	+	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein	0.012006	
chr6	47755904	47756032	reg1012621.p1	9.467	+	BC126194 BC126198 NM_181744 AY377391 AY288419 HQ258199	-6180	+	AK095395 NM_153838 DQ315370	-89674	+	AY140953 DQ315369 NM_153839	-131695	+	BC136779 AK123835 AK299301 NM_001013732 NM_207499	280436	-	TSC_hg19_v1_chr6_-_48078931 AK300335	322957	-	M65131 BC016282 TSC_hg19_v1_chr6_-_49430938 BX647789 AK312611 AK292568 NM_000255	1674977	-	BC126194|OPN5|221391|opsin 5##BC126198|OPN5|221391|opsin 5##NM_181744|OPN5|221391|opsin 5##AY377391|OPN5|221391|opsin 5##AY288419|OPN5|221391|opsin 5##HQ258199|OPN5|221391|opsin 5##AK095395|GPR115|221393|G protein-coupled receptor 115##NM_153838|GPR115|221393|G protein-coupled receptor 115##DQ315370|GPR115|221393|G protein-coupled receptor 115##AY140953|GPR111|222611|G protein-coupled receptor 111##DQ315369|GPR111|222611|G protein-coupled receptor 111##NM_153839|GPR111|222611|G protein-coupled receptor 111##BC136779|C6orf138|442213|chromosome 6 open reading frame 138##AK123835|C6orf138|442213|chromosome 6 open reading frame 138##AK299301|C6orf138|442213|chromosome 6 open reading frame 138##NM_001013732|C6orf138|442213|chromosome 6 open reading frame 138##NM_207499|C6orf138|442213|chromosome 6 open reading frame 138##AK300335|C6orf138|442213|chromosome 6 open reading frame 138##M65131|MUT|4594|methylmalonyl CoA mutase##BC016282|MUT|4594|methylmalonyl CoA mutase##BX647789|MUT|4594|methylmalonyl CoA mutase##AK312611|MUT|4594|methylmalonyl CoA mutase##AK292568|MUT|4594|methylmalonyl CoA mutase##NM_000255|MUT|4594|methylmalonyl CoA mutase	0.218209	CTCF.p2:-6:0.218
chr11	45894394	45894521	reg1015469.p1	9.466	+	AK302865 NM_021117 TSC_hg19_v1_chr11_+_45869025 AK291260 BC041814 EU219622 CU692042 AB014558	-25444	+	NM_001127457 AK294904	-25786	+	AK074929 NM_018389 AK027394 AK027747 AK130181 AF326199	-67766	+	NM_005456 TSC_hg19_v1_chr11_+_45907138	12635	+	TSC_hg19_v1_chr11_+_45907201 BC068470 BC035920 AF074091	12827	+	NM_001080446	34375	-	AK302865|CRY2|1408|cryptochrome 2 (photolyase-like)##NM_021117|CRY2|1408|cryptochrome 2 (photolyase-like)##AK291260|CRY2|1408|cryptochrome 2 (photolyase-like)##BC041814|CRY2|1408|cryptochrome 2 (photolyase-like)##EU219622|CRY2|1408|cryptochrome 2 (photolyase-like)##AB014558|CRY2|1408|cryptochrome 2 (photolyase-like)##NM_001127457|CRY2|1408|cryptochrome 2 (photolyase-like)##AK294904|CRY2|1408|cryptochrome 2 (photolyase-like)##AK074929|SLC35C1|55343|solute carrier family 35, member C1##NM_018389|SLC35C1|55343|solute carrier family 35, member C1##AK027394|SLC35C1|55343|solute carrier family 35, member C1##AK027747|SLC35C1|55343|solute carrier family 35, member C1##AF326199|SLC35C1|55343|solute carrier family 35, member C1##NM_005456|MAPK8IP1|9479|mitogen-activated protein kinase 8 interacting protein 1##BC068470|MAPK8IP1|9479|mitogen-activated protein kinase 8 interacting protein 1##BC035920|MAPK8IP1|9479|mitogen-activated protein kinase 8 interacting protein 1##AF074091|MAPK8IP1|9479|mitogen-activated protein kinase 8 interacting protein 1##NM_001080446|C11orf94|143678|chromosome 11 open reading frame 94	0.966915	CTCF.p2:-8:0.967
chr1	183592471	183592579	reg1012125.p2	9.465	+	M32011 TSC_hg19_v1_chr1_-_183560049 NM_001127651	-32493	-	TSC_hg19_v1_chr1_-_183559669 BC001606 NM_000433 NM_001190789 NM_001190794	-32812	-	BT007439 AB590135 DQ893650 DQ895812 CU674784 AF527950 TSC_hg19_v1_chr1_-_183559595 AK296672 AK312666 AK298713	-32967	-	AB528796 TSC_hg19_v1_chr1_-_183604811 AF017807 CU691198 AF006088	12283	-	TSC_hg19_v1_chr1_-_183604862 AK129598	12332	-	TSC_hg19_v1_chr1_-_183604891 BC057237 NM_005717 BC071857	12415	-	M32011|NCF2|4688|neutrophil cytosolic factor 2##NM_001127651|NCF2|4688|neutrophil cytosolic factor 2##BC001606|NCF2|4688|neutrophil cytosolic factor 2##NM_000433|NCF2|4688|neutrophil cytosolic factor 2##NM_001190789|NCF2|4688|neutrophil cytosolic factor 2##NM_001190794|NCF2|4688|neutrophil cytosolic factor 2##BT007439|NCF2|4688|neutrophil cytosolic factor 2##DQ893650|NCF2|4688|neutrophil cytosolic factor 2##DQ895812|NCF2|4688|neutrophil cytosolic factor 2##AF527950|NCF2|4688|neutrophil cytosolic factor 2##AK296672|NCF2|4688|neutrophil cytosolic factor 2##AK312666|NCF2|4688|neutrophil cytosolic factor 2##AK298713|NCF2|4688|neutrophil cytosolic factor 2##AF017807|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##AF006088|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##AK129598|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##BC057237|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##NM_005717|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##BC071857|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa	0.929169	CTCF.p2:8:0.929
chr4	166018088	166018213	reg1010154.p1	9.465	+	AK093201 AX747987 NM_152620	-65000	+	BC089393 NM_001012414	-119333	-	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	-139999	+	CU690322 BC036301 BX648915 BX538029 TSC_hg19_v1_chr4_-_166033990	15811	-	TSC_hg19_v1_chr4_-_166034013 NM_001100389	15875	-	NM_007246 TSC_hg19_v1_chr4_+_166128778 BC022503	110633	+	AK093201|TRIM60|166655|tripartite motif containing 60##NM_152620|TRIM60|166655|tripartite motif containing 60##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##BC036301|TMEM192|201931|transmembrane protein 192##BX648915|TMEM192|201931|transmembrane protein 192##BX538029|TMEM192|201931|transmembrane protein 192##NM_001100389|TMEM192|201931|transmembrane protein 192##NM_007246|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BC022503|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	0.856385	CTCF.p2:-4:0.856
chr10	28966149	28966248	reg1013278.p1	9.464	+	TSC_hg19_v1_chr10_+_28878692 BC010356	-87492	+	AB590052 AK297460 TSC_hg19_v1_chr10_+_28822585	-143652	+	AK290174 TSC_hg19_v1_chr10_+_28822429 AK223600 BC004258	-143765	+	TSC_hg19_v1_chr10_+_28966451 NM_012342 AK290639 BC019252 AK223065 U23070	249	+	NM_032517 BC021730 AY358694	611818	+	TSC_hg19_v1_chr10_+_29698475 BC066966 BC050354	732271	+	BC010356|WAC|51322|WW domain containing adaptor with coiled-coil##AK297460|WAC|51322|WW domain containing adaptor with coiled-coil##AK290174|WAC|51322|WW domain containing adaptor with coiled-coil##AK223600|WAC|51322|WW domain containing adaptor with coiled-coil##BC004258|WAC|51322|WW domain containing adaptor with coiled-coil##NM_012342|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK290639|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC019252|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK223065|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##U23070|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##NM_032517|LYZL1|84569|lysozyme-like 1##BC021730|LYZL1|84569|lysozyme-like 1##AY358694|LYZL1|84569|lysozyme-like 1##BC066966|LOC387647|387647|patched domain containing 3 pseudogene##BC050354|LOC387647|387647|patched domain containing 3 pseudogene	0.121358	
chr11	118798856	118798975	reg1013449.p1	9.464	+	AB094091 NM_182557	-17303	-	NM_032966 X68829	-34815	+	AK291512 NM_001716 BC110352 X68149 AB464488	-44355	+	NM_006760 Y13645 BC113900 AY455312 AB009454	28148	+	AB094092 NM_181721 BC028191 BC125040 BC038969	43563	+	TSC_hg19_v1_chr11_+_118868847 AB094093 NM_198489	69934	+	AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_006760|UPK2|7379|uroplakin 2##Y13645|UPK2|7379|uroplakin 2##BC113900|UPK2|7379|uroplakin 2##AY455312|UPK2|7379|uroplakin 2##AB009454|UPK2|7379|uroplakin 2##AB094092|FOXR1|283150|forkhead box R1##NM_181721|FOXR1|283150|forkhead box R1##BC028191|FOXR1|283150|forkhead box R1##BC125040|FOXR1|283150|forkhead box R1##BC038969|FOXR1|283150|forkhead box R1##AB094093|CCDC84|338657|coiled-coil domain containing 84##NM_198489|CCDC84|338657|coiled-coil domain containing 84	0.996298	CTCF.p2:10:0.996
chr13	39446927	39447061	reg1011591.p1	9.464	+	NM_207361	-185822	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	-522945	+	NM_016617 TSC_hg19_v1_chr13_+_38923946	-523043	+	DQ891676 EU176604 AK313632 BC025760 AK304159 NM_001144033 NM_145286	117932	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	165207	-	TSC_hg19_v1_chr13_-_39612251 NM_025138 NM_170719	165259	-	NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2##AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##DQ891676|STOML3|161003|stomatin (EPB72)-like 3##EU176604|STOML3|161003|stomatin (EPB72)-like 3##AK313632|STOML3|161003|stomatin (EPB72)-like 3##BC025760|STOML3|161003|stomatin (EPB72)-like 3##AK304159|STOML3|161003|stomatin (EPB72)-like 3##NM_001144033|STOML3|161003|stomatin (EPB72)-like 3##NM_145286|STOML3|161003|stomatin (EPB72)-like 3##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1##NM_025138|PROSER1|80209|proline and serine rich 1##NM_170719|PROSER1|80209|proline and serine rich 1	1.024932	CTCF.p2:31:0.981
chr17	38115321	38115450	reg1013333.p2	9.464	+	NM_001195545	-17659	+	TSC_hg19_v1_chr17_-_38083855 AF373101 BC071833 AX775843 AK075212 BC017087 AF395708 AF373102 AK074811 NM_139280	-31553	-	BC054042 BC050710 AF151043 BC000638 BC018837 TSC_hg19_v1_chr17_-_38078103	-37379	-	AK096439 NM_178171 BC109197	3859	+	TSC_hg19_v1_chr17_+_38137059 AK054611 AK094206 AK293539 AK300973 NM_002809 BC001684 BC012302	21680	+	D67025 TSC_hg19_v1_chr17_+_38137082	21696	+	NM_001195545|LRRC3C|100505591|leucine rich repeat containing 3C##AF373101|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC071833|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AX775843|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK075212|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC017087|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF395708|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF373102|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK074811|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##NM_139280|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC054042|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC050710|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF151043|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC000638|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC018837|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK096439|GSDMA|284110|gasdermin A##NM_178171|GSDMA|284110|gasdermin A##BC109197|GSDMA|284110|gasdermin A##AK054611|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK094206|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK293539|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK300973|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##NM_002809|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC012302|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##D67025|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	0.998947	CTCF.p2:-11:0.999
chr4	148082199	148082303	reg1012972.p1	9.464	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	-215253	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	-522160	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	-639255	-	NM_001166055 NM_001957 AK315931 TSC_hg19_v1_chr4_+_148402083	319824	+	TSC_hg19_v1_chr4_+_148402117 D90348 S57498 X61950	319872	+	TSC_hg19_v1_chr4_+_148402244 AK312812 BC022511 AK304451 S45956	320059	+	AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001166055|EDNRA|1909|endothelin receptor type A##NM_001957|EDNRA|1909|endothelin receptor type A##AK315931|EDNRA|1909|endothelin receptor type A##D90348|EDNRA|1909|endothelin receptor type A##S57498|EDNRA|1909|endothelin receptor type A##X61950|EDNRA|1909|endothelin receptor type A##AK312812|EDNRA|1909|endothelin receptor type A##BC022511|EDNRA|1909|endothelin receptor type A##AK304451|EDNRA|1909|endothelin receptor type A##S45956|EDNRA|1909|endothelin receptor type A	0.234891	CTCF.p2:3:0.235
chr2	201934107	201934274	reg1012790.p1	9.463	+	TSC_hg19_v1_chr2_-_201828407 AK316433 U40268 U27459 BC014834 AK302614 NM_006190	-105871	-	AY251943 AY251944 BC007654 NM_001142356 CU675739 DQ896612 AB463931 AL834430	-177471	+	NM_001136039 NM_001142355 TSC_hg19_v1_chr2_+_201754095 AF060513 AF283538 AK314709 NM_021824 AK225905 AB038949 AK023378 AF182416	-180072	+	AL832234 TSC_hg19_v1_chr2_-_201936363	2168	-	TSC_hg19_v1_chr2_-_201936368 AL833403	2186	-	AK315104 TSC_hg19_v1_chr2_-_201936386 AL832346	2197	-	AK316433|ORC2|4999|origin recognition complex, subunit 2##U40268|ORC2|4999|origin recognition complex, subunit 2##U27459|ORC2|4999|origin recognition complex, subunit 2##BC014834|ORC2|4999|origin recognition complex, subunit 2##AK302614|ORC2|4999|origin recognition complex, subunit 2##NM_006190|ORC2|4999|origin recognition complex, subunit 2##AY251943|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AY251944|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##BC007654|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_001142356|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##DQ896612|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AL834430|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_001136039|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_001142355|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF060513|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF283538|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AK314709|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_021824|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AK225905|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AB038949|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AK023378|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF182416|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AL832234|FAM126B|285172|family with sequence similarity 126, member B##AL833403|FAM126B|285172|family with sequence similarity 126, member B##AK315104|FAM126B|285172|family with sequence similarity 126, member B##AL832346|FAM126B|285172|family with sequence similarity 126, member B	0.832048	CTCF.p2:8:0.832
chr21	25341059	25341191	reg1012860.p1	9.462	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-2970352	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-2970435	+	TSC_hg19_v1_chr21_+_22370656 BC052946 NM_004540	-2970483	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	459943	+	TSC_hg19_v1_chr21_+_26934442 AF402776	1593347	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	1638690	-	BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##BC052946|NCAM2|4685|neural cell adhesion molecule 2##NM_004540|NCAM2|4685|neural cell adhesion molecule 2##AK124194|FLJ42200|400860|FLJ42200 protein##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39	0.979635	CTCF.p2:-2:0.980
chr7	32731633	32731750	reg1012261.p1	9.462	+	TSC_hg19_v1_chr7_+_32535168 AK090619 AX746537 NM_015060 BC027724 CU693288	-196461	+	TSC_hg19_v1_chr7_+_32535132 AL833560	-196596	+	NM_001130710 NM_001139499	-196822	-	TSC_hg19_v1_chr7_+_32767741 AK094370 BC126382 BC126384	36047	+	AK292802 BC047107 TSC_hg19_v1_chr7_-_32931241	199570	-	TSC_hg19_v1_chr7_-_32931372 BC037887	199678	-	AK090619|AVL9|23080|AVL9 homolog (S. cerevisiase)##NM_015060|AVL9|23080|AVL9 homolog (S. cerevisiase)##BC027724|AVL9|23080|AVL9 homolog (S. cerevisiase)##AL833560|AVL9|23080|AVL9 homolog (S. cerevisiase)##NM_001130710|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001139499|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK094370|ZNRF2P1|441208|zinc and ring finger 2 pseudogene 1##BC126382|ZNRF2P1|441208|zinc and ring finger 2 pseudogene 1##BC126384|ZNRF2P1|441208|zinc and ring finger 2 pseudogene 1##AK292802|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##BC047107|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##BC037887|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2	0.999851	CTCF.p2:-12:1.000
chr1	172711880	172712001	reg1012998.p2	9.460	+	D38122 AK314874 NM_000639 X89102 BC017502 U08137 AF288573 U11821 AB528416 DQ893466 DQ896147 CU675998 AY225406 AY858799	-83691	+	TSC_hg19_v1_chr1_+_172502291 NM_016227 AK302509 AL035291 BC137125 BC144487	-209559	+	TSC_hg19_v1_chr1_+_172502152 AK302949 AJ250075 NM_014283	-209798	+	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	308116	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	462713	-	CR542033 D90224 X79929 NM_003326	464452	-	D38122|FASLG|356|Fas ligand (TNF superfamily, member 6)##AK314874|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_000639|FASLG|356|Fas ligand (TNF superfamily, member 6)##X89102|FASLG|356|Fas ligand (TNF superfamily, member 6)##BC017502|FASLG|356|Fas ligand (TNF superfamily, member 6)##U08137|FASLG|356|Fas ligand (TNF superfamily, member 6)##AF288573|FASLG|356|Fas ligand (TNF superfamily, member 6)##U11821|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ893466|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ896147|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY225406|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY858799|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_016227|C1orf9|51430|chromosome 1 open reading frame 9##AK302509|C1orf9|51430|chromosome 1 open reading frame 9##AL035291|C1orf9|51430|chromosome 1 open reading frame 9##BC137125|C1orf9|51430|chromosome 1 open reading frame 9##BC144487|C1orf9|51430|chromosome 1 open reading frame 9##AK302949|C1orf9|51430|chromosome 1 open reading frame 9##AJ250075|C1orf9|51430|chromosome 1 open reading frame 9##NM_014283|C1orf9|51430|chromosome 1 open reading frame 9##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	0.970017	CTCF.p2:-6:0.970
chr16	57126798	57126954	reg1014760.p2	9.460	+	TSC_hg19_v1_chr16_+_57126530 AK315394	-303	+	TSC_hg19_v1_chr16_+_57126513 AF492484 BC053658	-368	+	TSC_hg19_v1_chr16_+_57126462 NM_152727	-411	+	AK023291 TSC_hg19_v1_chr16_-_57219949 AF212249 AF271785 BC020536	93036	-	AK025452 TSC_hg19_v1_chr16_-_57219950	93074	-	TSC_hg19_v1_chr16_-_57219952 NM_024946	93087	-	AK315394|CPNE2|221184|copine II##AF492484|CPNE2|221184|copine II##BC053658|CPNE2|221184|copine II##NM_152727|CPNE2|221184|copine II##AK023291|FAM192A|80011|family with sequence similarity 192, member A##AF212249|FAM192A|80011|family with sequence similarity 192, member A##AF271785|FAM192A|80011|family with sequence similarity 192, member A##BC020536|FAM192A|80011|family with sequence similarity 192, member A##AK025452|FAM192A|80011|family with sequence similarity 192, member A##NM_024946|FAM192A|80011|family with sequence similarity 192, member A	0.191108	
chr5	180211641	180211754	reg1011961.p1	9.460	+	NM_001001657 BC140756	-44620	-	TSC_hg19_v1_chr5_-_180076616 NM_002020 NM_182925	-135073	-	AK291679 AK309910 TSC_hg19_v1_chr5_-_180076601	-135095	-	M55621 TSC_hg19_v1_chr5_-_180229805 AK075429 AK090523	18067	-	NM_002406	18350	-	TSC_hg19_v1_chr5_-_180230897 NM_001114619 NM_001114620 AK290769	19215	-	NM_001001657|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1##BC140756|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1##NM_002020|FLT4|2324|fms-related tyrosine kinase 4##NM_182925|FLT4|2324|fms-related tyrosine kinase 4##AK291679|FLT4|2324|fms-related tyrosine kinase 4##AK309910|FLT4|2324|fms-related tyrosine kinase 4##M55621|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK075429|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK090523|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_002406|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_001114619|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_001114620|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK290769|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	0.979736	CTCF.p2:-5:0.980
chr9	90788429	90788568	reg1015330.p1	9.460	+	AK302448 NM_001166137	-38599	-	AF035013 AK291713 BX647489 TSC_hg19_v1_chr9_-_90589702 NM_001039803 NM_001170639 NM_001170640 NM_012119 NM_178432	-198851	-	AY904367 AX810715 BC002655 AX810688 AK298993 TSC_hg19_v1_chr9_-_90589450 AK296328 AK075325 AK294193 AK226135	-199089	-	TSC_hg19_v1_chr9_+_91003366 NM_006717 BC013571 AL136719 AK092017 AX747313 AF087864 AF106682 AK290009	214835	+	TSC_hg19_v1_chr9_+_91003988 AK315854	215500	+	NM_001161625 NM_145283 BC022521	361519	+	AK302448|FAM75C2|645961|family with sequence similarity 75, member C2##NM_001166137|FAM75C2|645961|family with sequence similarity 75, member C2##AF035013|CDK20|23552|cyclin-dependent kinase 20##AK291713|CDK20|23552|cyclin-dependent kinase 20##BX647489|CDK20|23552|cyclin-dependent kinase 20##NM_001039803|CDK20|23552|cyclin-dependent kinase 20##NM_001170639|CDK20|23552|cyclin-dependent kinase 20##NM_001170640|CDK20|23552|cyclin-dependent kinase 20##NM_012119|CDK20|23552|cyclin-dependent kinase 20##NM_178432|CDK20|23552|cyclin-dependent kinase 20##AY904367|CDK20|23552|cyclin-dependent kinase 20##BC002655|CDK20|23552|cyclin-dependent kinase 20##AK298993|CDK20|23552|cyclin-dependent kinase 20##AK296328|CDK20|23552|cyclin-dependent kinase 20##AK075325|CDK20|23552|cyclin-dependent kinase 20##AK294193|CDK20|23552|cyclin-dependent kinase 20##AK226135|CDK20|23552|cyclin-dependent kinase 20##NM_006717|SPIN1|10927|spindlin 1##BC013571|SPIN1|10927|spindlin 1##AL136719|SPIN1|10927|spindlin 1##AK092017|SPIN1|10927|spindlin 1##AF087864|SPIN1|10927|spindlin 1##AF106682|SPIN1|10927|spindlin 1##AK290009|SPIN1|10927|spindlin 1##AK315854|SPIN1|10927|spindlin 1##NM_001161625|NXNL2|158046|nucleoredoxin-like 2##NM_145283|NXNL2|158046|nucleoredoxin-like 2##BC022521|NXNL2|158046|nucleoredoxin-like 2	1.000194	CTCF.p2:-12:0.989
chr10	102810130	102810269	reg1015176.p1	9.459	+	TSC_hg19_v1_chr10_+_102792167 AK299405 BC000124	-18010	+	AK074707 TSC_hg19_v1_chr10_+_102792161	-18038	+	TSC_hg19_v1_chr10_+_102790985 NM_030971	-19210	+	TSC_hg19_v1_chr10_+_102820998 AK172864 NM_030929	10779	+	TSC_hg19_v1_chr10_+_102821745 BC007758 AY359087 AK225949 AK172862	11460	+	BC019674 NM_001085398	80703	-	AK299405|SFXN3|81855|sideroflexin 3##BC000124|SFXN3|81855|sideroflexin 3##AK074707|SFXN3|81855|sideroflexin 3##NM_030971|SFXN3|81855|sideroflexin 3##AK172864|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##NM_030929|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##BC007758|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AY359087|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK225949|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172862|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor	0.630899	CTCF.p2:-8:0.486
chr11	82638452	82638575	reg1014569.p1	9.459	+	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	-25739	+	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	-26996	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	-193615	-	AK312323 TSC_hg19_v1_chr11_-_82782872	144360	-	BC014213 NM_014488 TSC_hg19_v1_chr11_-_82782897 BX641138	144384	-	BC031316 TSC_hg19_v1_chr11_+_82783118	144605	+	NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AK312323|RAB30|27314|RAB30, member RAS oncogene family##BC014213|RAB30|27314|RAB30, member RAS oncogene family##NM_014488|RAB30|27314|RAB30, member RAS oncogene family##BX641138|RAB30|27314|RAB30, member RAS oncogene family##BC031316|LOC100506233|100506233|uncharacterized LOC100506233	0.650461	CTCF.p2:-2:0.650
chr1	65541190	65541308	reg1013202.p2	9.459	+	TSC_hg19_v1_chr1_-_65432203 BC111401	-109021	-	TSC_hg19_v1_chr1_-_65432181 BC062431 BC009079 NM_002227	-109235	-	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	-330450	+	TSC_hg19_v1_chr1_+_65613263 NM_203464 BC146653 BC016180 AK309057 BC066944 NM_001005353	72112	+	TSC_hg19_v1_chr1_+_65613835 NM_013410 AK025926 AK313611 X60673	72599	+	TSC_hg19_v1_chr1_+_65613971 BC040224 BC136886 BC136887 BC148270 CR456830 CU688216 DQ892294 DQ895494	72781	+	BC111401|JAK1|3716|Janus kinase 1##BC062431|JAK1|3716|Janus kinase 1##BC009079|JAK1|3716|Janus kinase 1##NM_002227|JAK1|3716|Janus kinase 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_203464|AK4|205|adenylate kinase 4##BC146653|AK4|205|adenylate kinase 4##BC016180|AK4|205|adenylate kinase 4##AK309057|AK4|205|adenylate kinase 4##BC066944|AK4|205|adenylate kinase 4##NM_001005353|AK4|205|adenylate kinase 4##NM_013410|AK4|205|adenylate kinase 4##AK025926|AK4|205|adenylate kinase 4##AK313611|AK4|205|adenylate kinase 4##X60673|AK4|205|adenylate kinase 4##BC040224|AK4|205|adenylate kinase 4##BC136886|AK4|205|adenylate kinase 4##BC136887|AK4|205|adenylate kinase 4##BC148270|AK4|205|adenylate kinase 4##CR456830|AK4|205|adenylate kinase 4##DQ892294|AK4|205|adenylate kinase 4##DQ895494|AK4|205|adenylate kinase 4	0.937672	CTCF.p2:0:0.938
chr17	46868475	46868602	reg1012014.p1	9.459	+	BT007410 AB464574 DQ893517 DQ896496 U57052 BC007092 BC070233 AK313266 AK225234 NM_006361 AY937237	-62502	-	BC030950 AF331165 NM_032391	-68658	-	AK056123 AB464577 AK315480 BC015565 AK056414 NM_024017 TSC_hg19_v1_chr17_-_46703952	-164750	-	CU689652 BC033563 NM_173623 AK310321	3107	-	AK097392 AK302952 BC041368 AL834151 NM_001130918	25886	-	NM_005831 AK293329 TSC_hg19_v1_chr17_+_46908406 AK293137 AK303313 AK304024 AK310648 AK314796 U22897 AK222666 AK223227 AK298177 BC004130	39852	+	BT007410|HOXB13|10481|homeobox B13##DQ893517|HOXB13|10481|homeobox B13##DQ896496|HOXB13|10481|homeobox B13##U57052|HOXB13|10481|homeobox B13##BC007092|HOXB13|10481|homeobox B13##BC070233|HOXB13|10481|homeobox B13##AK313266|HOXB13|10481|homeobox B13##AK225234|HOXB13|10481|homeobox B13##NM_006361|HOXB13|10481|homeobox B13##AY937237|HOXB13|10481|homeobox B13##BC030950|PRAC|84366|prostate cancer susceptibility candidate##AF331165|PRAC|84366|prostate cancer susceptibility candidate##NM_032391|PRAC|84366|prostate cancer susceptibility candidate##AK056123|HOXB9|3219|homeobox B9##AK315480|HOXB9|3219|homeobox B9##BC015565|HOXB9|3219|homeobox B9##AK056414|HOXB9|3219|homeobox B9##NM_024017|HOXB9|3219|homeobox B9##BC033563|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_173623|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK310321|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK097392|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK302952|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC041368|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AL834151|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_001130918|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_005831|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293329|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293137|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK303313|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK304024|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK314796|CALCOCO2|10241|calcium binding and coiled-coil domain 2##U22897|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK222666|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK223227|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK298177|CALCOCO2|10241|calcium binding and coiled-coil domain 2##BC004130|CALCOCO2|10241|calcium binding and coiled-coil domain 2	1.010928	CTCF.p2:34:0.993
chr2	167556734	167556840	reg1013129.p1	9.458	+	TSC_hg19_v1_chr2_-_167350721 BC062699	-206089	-	AK308450 TSC_hg19_v1_chr2_-_167350647	-206171	-	BC141864 M91556 NM_002976	-213309	-	EF119718 EF119719 EF119720 EF119721 EF119722 NM_001079810 NM_001199143 NM_152381 AK097519	188209	+	EF119711 EF119717 NM_001199144 NM_001199145	487005	+	NM_020981	1118394	+	BC062699|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##AK308450|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##BC141864|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##M91556|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##NM_002976|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##EF119718|XIRP2|129446|xin actin-binding repeat containing 2##EF119719|XIRP2|129446|xin actin-binding repeat containing 2##EF119720|XIRP2|129446|xin actin-binding repeat containing 2##EF119721|XIRP2|129446|xin actin-binding repeat containing 2##EF119722|XIRP2|129446|xin actin-binding repeat containing 2##NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199143|XIRP2|129446|xin actin-binding repeat containing 2##NM_152381|XIRP2|129446|xin actin-binding repeat containing 2##AK097519|XIRP2|129446|xin actin-binding repeat containing 2##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	0.62171	CTCF.p2:-14:0.622
chr22	18507344	18507456	reg1010245.p3	9.458	+	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	-139	-	TSC_hg19_v1_chr22_-_18484268 AK127487	-23172	-	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-250066	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	53288	+	TSC_hg19_v1_chr22_+_18560755 NM_001127649 BC016280 BC047320	53367	+	TSC_hg19_v1_chr22_+_18593455 AK056947 NM_001193414 NM_018943	86063	+	AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26##NM_001127649|PEX26|55670|peroxisomal biogenesis factor 26##BC016280|PEX26|55670|peroxisomal biogenesis factor 26##BC047320|PEX26|55670|peroxisomal biogenesis factor 26##AK056947|TUBA8|51807|tubulin, alpha 8##NM_001193414|TUBA8|51807|tubulin, alpha 8##NM_018943|TUBA8|51807|tubulin, alpha 8	0.923363	CTCF.p2:-15:0.923
chr3	148027302	148027482	reg1013994.p1	9.458	+	BC104848 BC104850 TSC_hg19_v1_chr3_+_147127864 AB464362	-899530	+	TSC_hg19_v1_chr3_+_147127156 NM_003412	-900221	+	NM_001243256 NM_032153	-902797	-	NM_000685 NM_004835 NM_009585 NM_031850 TSC_hg19_v1_chr3_+_148415688 AK291541 BC068494 BC022447 M87290 S77410 X65699	388295	+	NM_032049	420574	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	518206	+	BC104848|ZIC1|7545|Zic family member 1##BC104850|ZIC1|7545|Zic family member 1##NM_003412|ZIC1|7545|Zic family member 1##NM_001243256|ZIC4|84107|Zic family member 4##NM_032153|ZIC4|84107|Zic family member 4##NM_000685|AGTR1|185|angiotensin II receptor, type 1##NM_004835|AGTR1|185|angiotensin II receptor, type 1##NM_009585|AGTR1|185|angiotensin II receptor, type 1##NM_031850|AGTR1|185|angiotensin II receptor, type 1##AK291541|AGTR1|185|angiotensin II receptor, type 1##BC068494|AGTR1|185|angiotensin II receptor, type 1##BC022447|AGTR1|185|angiotensin II receptor, type 1##M87290|AGTR1|185|angiotensin II receptor, type 1##S77410|AGTR1|185|angiotensin II receptor, type 1##X65699|AGTR1|185|angiotensin II receptor, type 1##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)	0.99804	CTCF.p2:-6:0.998
chr3	196950987	196951117	reg1011878.p1	9.458	+	AK294855 NM_001204387 NM_001204388	-40051	-	TSC_hg19_v1_chr3_-_196756689 NM_033316 NM_005929	-194350	-	BT007377 AB527337 M12154 BC093920 BC111947 BC143257 BC002623 BC001875 BC007550 BC053510 BC071910 TSC_hg19_v1_chr3_-_196756658 BC032752	-194429	-	TSC_hg19_v1_chr3_-_197024987 BC015560 BC028486 AK310893	73881	-	BC140841 BC144651 TSC_hg19_v1_chr3_-_197025506 AK304280 NM_001098424 NM_001204386 NM_004087 U13896 U13897 AK310596	74422	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	331790	-	AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_033316|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_005929|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BT007377|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##M12154|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC093920|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC111947|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC143257|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC002623|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC001875|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC007550|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC053510|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC071910|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC032752|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC015560|DLG1|1739|discs, large homolog 1 (Drosophila)##BC028486|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310893|DLG1|1739|discs, large homolog 1 (Drosophila)##BC140841|DLG1|1739|discs, large homolog 1 (Drosophila)##BC144651|DLG1|1739|discs, large homolog 1 (Drosophila)##AK304280|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001098424|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204386|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_004087|DLG1|1739|discs, large homolog 1 (Drosophila)##U13896|DLG1|1739|discs, large homolog 1 (Drosophila)##U13897|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310596|DLG1|1739|discs, large homolog 1 (Drosophila)##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1	0.995195	CTCF.p2:-11:0.995
chr7	116231939	116232071	reg1014579.p1	9.458	+	NM_001172896 TSC_hg19_v1_chr7_+_116166415 AF172085 NM_001172897 AK307501 EF649773 EF649774 AB209926	-65601	+	TSC_hg19_v1_chr7_+_116165089 Z18951 BC082246 DQ890647 DQ893827 EU176473 AB489179 AM393679 AB451284 AB451416 BT007143	-66903	+	BC009685 TSC_hg19_v1_chr7_+_116165054 BC006432 NM_001172895 AY762103	-66947	+	TSC_hg19_v1_chr7_+_116312490 EU176015 J02958 NM_000245 NM_001127500 X54559 DQ656040 BC130420 AK309532	80467	+	AK296974 TSC_hg19_v1_chr7_+_116364175	132170	+	TSC_hg19_v1_chr7_+_116395441 BC127890	163446	+	NM_001172896|CAV1|857|caveolin 1, caveolae protein, 22kDa##AF172085|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172897|CAV1|857|caveolin 1, caveolae protein, 22kDa##AK307501|CAV1|857|caveolin 1, caveolae protein, 22kDa##EF649773|CAV1|857|caveolin 1, caveolae protein, 22kDa##EF649774|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB209926|CAV1|857|caveolin 1, caveolae protein, 22kDa##Z18951|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC082246|CAV1|857|caveolin 1, caveolae protein, 22kDa##DQ890647|CAV1|857|caveolin 1, caveolae protein, 22kDa##DQ893827|CAV1|857|caveolin 1, caveolae protein, 22kDa##EU176473|CAV1|857|caveolin 1, caveolae protein, 22kDa##AM393679|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB451284|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB451416|CAV1|857|caveolin 1, caveolae protein, 22kDa##BT007143|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC009685|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC006432|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172895|CAV1|857|caveolin 1, caveolae protein, 22kDa##AY762103|CAV1|857|caveolin 1, caveolae protein, 22kDa##EU176015|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK296974|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	0.044782	
chr19	16947004	16947152	reg1015031.p1	9.457	+	TSC_hg19_v1_chr19_+_16940221 NM_015260 AB014600 AY706204 BC063531 BC110821 AB463259 BC025026	-6876	+	BX648940 NM_001007525 CR749794	-116290	+	TSC_hg19_v1_chr19_+_16771949 AK025981 NM_024074 AK292764 BC001195	-175112	+	TSC_hg19_v1_chr19_+_16999830 AF055917 NM_003950	52747	+	TSC_hg19_v1_chr19_+_16999929 BC074782 AF080214 AY431102	52857	+	AK092632 TSC_hg19_v1_chr19_-_17007756 AK124052	60670	-	NM_015260|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##AB014600|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##AY706204|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BC063531|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BC110821|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BC025026|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BX648940|NWD1|284434|NACHT and WD repeat domain containing 1##NM_001007525|NWD1|284434|NACHT and WD repeat domain containing 1##CR749794|NWD1|284434|NACHT and WD repeat domain containing 1##AK025981|TMEM38A|79041|transmembrane protein 38A##NM_024074|TMEM38A|79041|transmembrane protein 38A##AK292764|TMEM38A|79041|transmembrane protein 38A##BC001195|TMEM38A|79041|transmembrane protein 38A##AF055917|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##NM_003950|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##BC074782|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AF080214|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AY431102|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AK092632|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK124052|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8	0.0372	
chr6	131949430	131949588	reg1014254.p1	9.457	+	AB385438 AF135022 AM393572 EU832308 EU832392 EU392526 EU392528 EU392529 EU392530 EU392531 AK315030 AF105332 EU392520 EU392522 EU392527 EU392532 BC060759 TSC_hg19_v1_chr6_-_131949372 AF104255 AL136776 AB033042 BC007088 NM_004830 NM_015979	-222	-	NM_000045 NM_001244438 AY074488 BC005321 TSC_hg19_v1_chr6_+_131894365 M14502 BC020653 CU676606 AB590280 DQ892039 DQ895230 BT006741	-55127	+	NM_004842 NM_138633	-378211	+	AK024899 AK296080 AK310691 AK315893 NM_005021 AK292903 EF560735 AF005632 AB587329 DQ234347	8973	+	BC120953 BC120954 NM_030908	73031	-	NM_001145659	82647	-	AF135022|MED23|9439|mediator complex subunit 23##AM393572|MED23|9439|mediator complex subunit 23##EU832308|MED23|9439|mediator complex subunit 23##EU832392|MED23|9439|mediator complex subunit 23##EU392526|MED23|9439|mediator complex subunit 23##EU392528|MED23|9439|mediator complex subunit 23##EU392529|MED23|9439|mediator complex subunit 23##EU392530|MED23|9439|mediator complex subunit 23##EU392531|MED23|9439|mediator complex subunit 23##AK315030|MED23|9439|mediator complex subunit 23##AF105332|MED23|9439|mediator complex subunit 23##EU392520|MED23|9439|mediator complex subunit 23##EU392522|MED23|9439|mediator complex subunit 23##EU392527|MED23|9439|mediator complex subunit 23##EU392532|MED23|9439|mediator complex subunit 23##BC060759|MED23|9439|mediator complex subunit 23##AF104255|MED23|9439|mediator complex subunit 23##AL136776|MED23|9439|mediator complex subunit 23##AB033042|MED23|9439|mediator complex subunit 23##BC007088|MED23|9439|mediator complex subunit 23##NM_004830|MED23|9439|mediator complex subunit 23##NM_015979|MED23|9439|mediator complex subunit 23##NM_000045|ARG1|383|arginase, liver##NM_001244438|ARG1|383|arginase, liver##AY074488|ARG1|383|arginase, liver##BC005321|ARG1|383|arginase, liver##M14502|ARG1|383|arginase, liver##BC020653|ARG1|383|arginase, liver##DQ892039|ARG1|383|arginase, liver##DQ895230|ARG1|383|arginase, liver##BT006741|ARG1|383|arginase, liver##NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7##AK024899|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK296080|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK310691|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK315893|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##NM_005021|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK292903|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##EF560735|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##DQ234347|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##BC120953|OR2A4|79541|olfactory receptor, family 2, subfamily A, member 4##BC120954|OR2A4|79541|olfactory receptor, family 2, subfamily A, member 4##NM_030908|OR2A4|79541|olfactory receptor, family 2, subfamily A, member 4##NM_001145659|CTAGE9|643854|CTAGE family, member 9	0.735132	CTCF.p2:39:0.715
chrX	56799516	56799675	reg1013494.p1	9.457	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-43904	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-209544	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-540685	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	222376	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	348333	-	BC071694 NM_019003	364462	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.740395	CTCF.p2:46:0.740
chr14	59974176	59974300	reg1013304.p1	9.456	+	TSC_hg19_v1_chr14_+_59951234 NM_001098625 NM_016475 AF151047 AF161445 AF212245 BC010359 AK027591 BC005198 AK021683 AL136696 BX161501 AK056145 AK298209	-23011	+	AK294843 TSC_hg19_v1_chr14_-_59951127	-23111	-	TSC_hg19_v1_chr14_-_59951106 AK058165 NM_144581 BC012131	-23158	-	NM_001164399	69310	-	CR457030 L10335 TSC_hg19_v1_chr14_-_60097308	123027	-	TSC_hg19_v1_chr14_-_60097342 BC000314 BC003003 AK297492	123106	-	NM_001098625|JKAMP|51528|JNK1/MAPK8-associated membrane protein##NM_016475|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AF151047|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AF161445|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AF212245|JKAMP|51528|JNK1/MAPK8-associated membrane protein##BC010359|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK027591|JKAMP|51528|JNK1/MAPK8-associated membrane protein##BC005198|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK021683|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AL136696|JKAMP|51528|JNK1/MAPK8-associated membrane protein##BX161501|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK056145|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK298209|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK058165|C14orf149|112849|chromosome 14 open reading frame 149##NM_144581|C14orf149|112849|chromosome 14 open reading frame 149##BC012131|C14orf149|112849|chromosome 14 open reading frame 149##NM_001164399|C14orf38|729665|chromosome 14 open reading frame 38##CR457030|RTN1|6252|reticulon 1##L10335|RTN1|6252|reticulon 1##BC000314|RTN1|6252|reticulon 1##BC003003|RTN1|6252|reticulon 1##AK297492|RTN1|6252|reticulon 1	1.142962	CTCF.p2:10:0.909	CTCF.p2:-32:0.234
chr16	20394864	20394960	reg1011795.p1	9.456	+	AK127643 AK055722 AK091961 AK096043 AX747279 M15881 BC035975 AK127648 NM_001008389 NM_003361	-30880	-	U36221 AK312277 BX647831 BX648201 BX649067 BX648023 NM_001007240 NM_001007241 NM_001007242 NM_001502 CR749600	-56059	-	AB196529 AY635179 BC137237 BC137238 BC144547 NM_001002911 AK291384	-309825	-	BC042607 BC044936 NM_174924 AK097476	21133	-	TSC_hg19_v1_chr16_+_20420855 BC016703 BC068516 NM_017888 AK000588 BC013753	25948	+	NM_001010845 AK298359 AK055867 AK303774 AK096039 AK298434 BC125175 BC125176	67989	+	AK127643|UMOD|7369|uromodulin##AK055722|UMOD|7369|uromodulin##AK091961|UMOD|7369|uromodulin##AK096043|UMOD|7369|uromodulin##M15881|UMOD|7369|uromodulin##BC035975|UMOD|7369|uromodulin##AK127648|UMOD|7369|uromodulin##NM_001008389|UMOD|7369|uromodulin##NM_003361|UMOD|7369|uromodulin##U36221|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK312277|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX647831|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648201|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX649067|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648023|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007240|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007241|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007242|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001502|GP2|2813|glycoprotein 2 (zymogen granule membrane)##CR749600|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AB196529|GPR139|124274|G protein-coupled receptor 139##AY635179|GPR139|124274|G protein-coupled receptor 139##BC137237|GPR139|124274|G protein-coupled receptor 139##BC137238|GPR139|124274|G protein-coupled receptor 139##NM_001002911|GPR139|124274|G protein-coupled receptor 139##AK291384|GPR139|124274|G protein-coupled receptor 139##BC042607|PDILT|204474|protein disulfide isomerase-like, testis expressed##BC044936|PDILT|204474|protein disulfide isomerase-like, testis expressed##NM_174924|PDILT|204474|protein disulfide isomerase-like, testis expressed##AK097476|PDILT|204474|protein disulfide isomerase-like, testis expressed##BC016703|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##BC068516|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##NM_017888|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##AK000588|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##BC013753|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##NM_001010845|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK298359|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK055867|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK303774|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK096039|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK298434|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC125175|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC125176|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A	0.755249	CTCF.p2:-3:0.755
chr2	130011147	130011273	reg1012933.p1	9.456	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-934910	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-1083163	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-1162349	+	NM_032144 AL136727	726025	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	875648	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	891401	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.0	
chr3	28768489	28768608	reg1013848.p1	9.456	+	NM_001040432	-336562	+	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	-377987	-	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	-378166	-	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	554416	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	1879474	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	1879855	+	NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2##NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	0.981446	CTCF.p2:-1:0.981
chr4	151164144	151164275	reg1013314.p2	9.456	+	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	-164684	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-1800625	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-1800870	-	NM_006439	338867	+	TSC_hg19_v1_chr4_-_151770612 AB208838	606440	-	TSC_hg19_v1_chr4_-_151773972 BC172218	609785	-	AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.10878	
chr10	6962071	6962220	reg1013000.p1	9.455	+	TSC_hg19_v1_chr10_+_6622460 AY007155	-339665	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	-339884	-	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-717269	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	489105	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	491289	-	AK027849 TSC_hg19_v1_chr10_-_7659249	697072	-	AY007155|LOC439949|439949|uncharacterized LOC439949##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.034685	
chr16	58695247	58695368	reg1012951.p1	9.455	+	TSC_hg19_v1_chr16_-_58663742 BC040523 AL833549 NM_016284 NM_206999	-31562	-	AK300281 AK056927 BX537840 TSC_hg19_v1_chr16_-_58663736 EF553522 AL832769	-31571	-	TSC_hg19_v1_chr16_-_58663731 BX647815	-31578	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	23349	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	72890	-	AK124734 NM_001796	3375431	-	BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK300281|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK056927|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##BX537840|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##EF553522|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL832769|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##BX647815|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2	0.260579	CTCF.p2:5:0.261
chr10	102638333	102638453	reg1015524.p1	9.454	+	TSC_hg19_v1_chr10_+_102505338 L25597 M89470 NM_000278 NM_003987 NM_003988 NM_003989 NM_003990	-132991	+	TSC_hg19_v1_chr10_+_102295705 AF395830 BC007719 AB528628 DQ892767 DQ896013	-342635	+	TSC_hg19_v1_chr10_+_102295696 AK295353 NM_017902 AK000622	-342758	+	AF460991 AF460992 NM_001136123 NM_001243770 NM_018121	33932	+	TSC_hg19_v1_chr10_+_102672719 AK292565 AL832343 AL833126 BC015131 BC047715 BC030565 BC064526 BC020915 BC073832 AL832383 AB385255	34382	+	TSC_hg19_v1_chr10_+_102729286 BC051030 AK297431	90883	+	L25597|PAX2|5076|paired box 2##M89470|PAX2|5076|paired box 2##NM_000278|PAX2|5076|paired box 2##NM_003987|PAX2|5076|paired box 2##NM_003988|PAX2|5076|paired box 2##NM_003989|PAX2|5076|paired box 2##NM_003990|PAX2|5076|paired box 2##AF395830|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##BC007719|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ892767|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ896013|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK295353|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##NM_017902|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK000622|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AF460991|FAM178A|55719|family with sequence similarity 178, member A##AF460992|FAM178A|55719|family with sequence similarity 178, member A##NM_001136123|FAM178A|55719|family with sequence similarity 178, member A##NM_001243770|FAM178A|55719|family with sequence similarity 178, member A##NM_018121|FAM178A|55719|family with sequence similarity 178, member A##AK292565|FAM178A|55719|family with sequence similarity 178, member A##AL832343|FAM178A|55719|family with sequence similarity 178, member A##AL833126|FAM178A|55719|family with sequence similarity 178, member A##BC015131|FAM178A|55719|family with sequence similarity 178, member A##BC047715|FAM178A|55719|family with sequence similarity 178, member A##BC030565|FAM178A|55719|family with sequence similarity 178, member A##BC064526|FAM178A|55719|family with sequence similarity 178, member A##BC020915|FAM178A|55719|family with sequence similarity 178, member A##BC073832|FAM178A|55719|family with sequence similarity 178, member A##AL832383|FAM178A|55719|family with sequence similarity 178, member A##BC051030|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G##AK297431|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	0.817917	CTCF.p2:12:0.818
chr14	23734432	23734582	reg1015109.p1	9.454	+	TSC_hg19_v1_chr14_-_23652870 AL365342 NM_012244 Y18483 AL365346 AK223610	-81635	-	TSC_hg19_v1_chr14_-_23652818 AB037669	-81685	-	TSC_hg19_v1_chr14_-_23623523 AK307609 AK300384 BX248288 NM_182728	-110946	-	AB037864 AF463523 TSC_hg19_v1_chr14_-_23755306 AK296927	20762	-	NM_020834 TSC_hg19_v1_chr14_-_23755308	20818	-	NM_001199864 NM_004050 AK289519 TSC_hg19_v1_chr14_+_23776072 BC104789 BC113522 D87461 BC011637 NM_001199839	41537	+	AL365342|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##NM_012244|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##Y18483|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AL365346|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AK223610|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AB037669|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AK307609|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AK300384|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##BX248288|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##NM_182728|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AB037864|HOMEZ|57594|homeobox and leucine zipper encoding##AF463523|HOMEZ|57594|homeobox and leucine zipper encoding##AK296927|HOMEZ|57594|homeobox and leucine zipper encoding##NM_020834|HOMEZ|57594|homeobox and leucine zipper encoding##NM_001199864|BCL2L2-PABPN1|100529063|BCL2L2-PABPN1 readthrough##NM_004050|BCL2L2|599|BCL2-like 2##AK289519|BCL2L2|599|BCL2-like 2##BC104789|BCL2L2|599|BCL2-like 2##BC113522|BCL2L2|599|BCL2-like 2##D87461|BCL2L2|599|BCL2-like 2##BC011637|BCL2L2-PABPN1|100529063|BCL2L2-PABPN1 readthrough##NM_001199839|BCL2L2|599|BCL2-like 2	0.994447	CTCF.p2:-25:0.994
chr17	70114838	70114961	reg1009000.p1	9.454	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-1949203	+	BC033038 NM_170742	-2013905	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-2043469	+	TSC_hg19_v1_chr17_-_70116937 AL833139	2039	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	2260	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	2271	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.0	
chr6	93520689	93520815	reg1012531.p1	9.454	+	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-2223914	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-2224069	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-2514140	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	608431	-	TSC_hg19_v1_chr6_-_96025325 BC047582	2504537	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	2504649	+	BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha	0.014691	
chr12	76425340	76425482	reg1012208.p1	9.453	+	TSC_hg19_v1_chr12_-_76425369 BC126425 BC130427 BC110820 U92983 BC018929	-121	-	AF220656 TSC_hg19_v1_chr12_-_76424608	-864	-	BC005225 TSC_hg19_v1_chr12_-_75905414 NM_007043	-519992	-	TSC_hg19_v1_chr12_-_76425376 AK304224 AB587598 NM_007350 Z50194	116	-	TSC_hg19_v1_chr12_-_76478393 AK295147 M86667	52967	-	TSC_hg19_v1_chr12_-_76478466 BC002387 AL162068 AK122670 AK298936 D28430 AK297500 AK304787	53077	-	BC126425|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC130427|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC110820|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##U92983|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC018929|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##AF220656|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC005225|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##NM_007043|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK304224|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##NM_007350|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##Z50194|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##AK295147|NAP1L1|4673|nucleosome assembly protein 1-like 1##M86667|NAP1L1|4673|nucleosome assembly protein 1-like 1##BC002387|NAP1L1|4673|nucleosome assembly protein 1-like 1##AL162068|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK122670|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK298936|NAP1L1|4673|nucleosome assembly protein 1-like 1##D28430|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK297500|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK304787|NAP1L1|4673|nucleosome assembly protein 1-like 1	0.035855	
chr12	108070183	108070303	reg1012858.p1	9.452	+	AK127295 NM_001017523	-95610	+	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	-358030	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-582633	-	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	9424	+	AK056378 TSC_hg19_v1_chr12_-_108154899	84596	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	84667	-	AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK056378|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4	0.994897	CTCF.p2:-34:0.995
chr12	69257768	69257900	reg1014519.p1	9.452	+	EU076746 EU076747 EU076748 EU076749 TSC_hg19_v1_chr12_+_69202803	-55033	+	TSC_hg19_v1_chr12_+_69201980 AK290341	-55842	+	TSC_hg19_v1_chr12_+_69201958 BC009893 BC013887 BC067077 M92424 NM_002392 Z12020	-55923	+	TSC_hg19_v1_chr12_-_69326952 AF368463 AK313180 BC022276 NM_001005502 NM_198320	69128	-	J04970 NM_001874 AK127859	99185	-	NM_007007 TSC_hg19_v1_chr12_+_69633348 AK223568 AK299928	375499	+	EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##AK290341|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##M92424|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##NM_002392|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##Z12020|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##AF368463|CPM|1368|carboxypeptidase M##AK313180|CPM|1368|carboxypeptidase M##BC022276|CPM|1368|carboxypeptidase M##NM_001005502|CPM|1368|carboxypeptidase M##NM_198320|CPM|1368|carboxypeptidase M##J04970|CPM|1368|carboxypeptidase M##NM_001874|CPM|1368|carboxypeptidase M##AK127859|CPM|1368|carboxypeptidase M##NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	0.961123	CTCF.p2:4:0.961
chr2	211900422	211900534	reg1012408.p2	9.452	+	AK316425 NM_001122634 AK302778 AY317138	-442393	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-479089	+	NM_001122633 AB208800	-558060	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	1502837	-	AK301503 AF130863 NM_016260	2114577	-	BC028936 NM_001079526	2115854	-	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	0.981002	CTCF.p2:-13:0.981
chr14	24834951	24835087	reg1010500.p1	9.451	+	AF156884 AY453693 AY494982 AY494983 CU692020 TSC_hg19_v1_chr14_-_24809197 BC062584 AK296309 BC041668 AK296140 AK075275 NM_006871	-25880	-	BX248285 BC027943 AK122714 AK126468 NM_001198568 NM_001198592 NM_139247 TSC_hg19_v1_chr14_-_24804278	-30754	-	NM_181657	-52707	+	AK310445 EU887632 EU887633 EU887634 NM_001136022 NM_001198967	1125	+	NM_001198965 NM_004554 BC037735 AK293185 TSC_hg19_v1_chr14_+_24837389 AK311078 AK311425 L41066 BC053855 AB527875 EU446638 EU887641 EU887642 EU887643	2366	+	AK302271 NM_001198966 AK310433 EU887644 EU887645 EU887646 EU887647 EU887648 EU887649 AK300450	3356	+	AF156884|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY453693|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494982|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494983|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC062584|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296309|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC041668|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296140|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK075275|RIPK3|11035|receptor-interacting serine-threonine kinase 3##NM_006871|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BX248285|ADCY4|196883|adenylate cyclase 4##BC027943|ADCY4|196883|adenylate cyclase 4##AK122714|ADCY4|196883|adenylate cyclase 4##AK126468|ADCY4|196883|adenylate cyclase 4##NM_001198568|ADCY4|196883|adenylate cyclase 4##NM_001198592|ADCY4|196883|adenylate cyclase 4##NM_139247|ADCY4|196883|adenylate cyclase 4##NM_181657|LTB4R|1241|leukotriene B4 receptor##AK310445|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887632|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887633|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887634|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001136022|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198967|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198965|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_004554|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##BC037735|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK293185|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK311078|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK311425|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##L41066|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##BC053855|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU446638|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887641|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887642|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887643|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK302271|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198966|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK310433|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887644|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887645|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887646|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887647|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887648|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887649|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK300450|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4	0.949904	CTCF.p2:26:0.950
chr14	64266498	64266640	reg1008294.p1	9.451	+	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	-71820	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	-158007	-	BX248008 NM_001008726	-158445	-	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	53126	+	NM_182913 AY061758 AK297874	414308	+	NM_182910	416102	+	AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##BX248008|WDR89|112840|WD repeat domain 89##NM_001008726|WDR89|112840|WD repeat domain 89##NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2	0.900047	CTCF.p2:-61:0.900
chr15	72072832	72072982	reg1013185.p1	9.451	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	-233327	+	NM_024817 BC140868	-639097	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-665036	-	AF121129 NM_014249 NM_016346 AF148128	30005	+	AK097557 NM_001166340	333691	+	NM_001172109 NM_001172110	336311	+	AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172109|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172110|SENP8|123228|SUMO/sentrin specific peptidase family member 8	0.85451	CTCF.p2:4:0.855
chr18	45557496	45557633	reg1015879.p1	9.451	+	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	-100075	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	-100349	-	BC014840 NM_005901	-100639	-	AM988836 AK296709 NM_001039360 EF120357	106135	-	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	378145	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	508209	+	NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor	0.317914	CTCF.p2:-3:0.298
chr18	46002387	46002506	reg1014073.p1	9.451	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-66737	-	AM988836 AK296709 NM_001039360 EF120357	-338747	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	-544957	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	63327	+	AK131394 NM_001190823	466701	-	AK301535 NM_001190822	473256	-	AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7	0.101139	
chr2	190152751	190152891	reg1014009.p1	9.451	+	AB384824 J04478 Y14690 AB209045 BC086874 AK297936 TSC_hg19_v1_chr2_-_190044488 AK300146 M31365 NM_000393	-108354	-	TSC_hg19_v1_chr2_+_189839133 AB384877 X07240	-313648	+	X14420 BX649097 TSC_hg19_v1_chr2_+_189839117	-313703	+	BC040567 NM_032168 TSC_hg19_v1_chr2_+_190306177	153349	+	TSC_hg19_v1_chr2_+_190306204 AK022607 AK290445 CR749440 AK022581 AK091546 AX747050	153388	+	AF171087 AF215636 AF226614 AF231121 AL136944 BC035893 TSC_hg19_v1_chr2_-_190445510 AK223236 AK292146 AK314827	292668	-	J04478|COL5A2|1290|collagen, type V, alpha 2##Y14690|COL5A2|1290|collagen, type V, alpha 2##AB209045|COL5A2|1290|collagen, type V, alpha 2##BC086874|COL5A2|1290|collagen, type V, alpha 2##AK297936|COL5A2|1290|collagen, type V, alpha 2##AK300146|COL5A2|1290|collagen, type V, alpha 2##M31365|COL5A2|1290|collagen, type V, alpha 2##NM_000393|COL5A2|1290|collagen, type V, alpha 2##X07240|COL3A1|1281|collagen, type III, alpha 1##X14420|COL3A1|1281|collagen, type III, alpha 1##BC040567|WDR75|84128|WD repeat domain 75##NM_032168|WDR75|84128|WD repeat domain 75##AK022607|WDR75|84128|WD repeat domain 75##AK290445|WDR75|84128|WD repeat domain 75##CR749440|WDR75|84128|WD repeat domain 75##AK022581|WDR75|84128|WD repeat domain 75##AK091546|WDR75|84128|WD repeat domain 75##AF171087|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF215636|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF226614|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF231121|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AL136944|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##BC035893|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK223236|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK292146|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK314827|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1	0.526696	CTCF.p2:-6:0.527
chr5	134801942	134802048	reg1013107.p2	9.451	+	AK131088 AB161513 NM_001099221	-13958	-	CU686932 BC074831 BC074832 BC069608 BC069610 BC117156 BC117158 AB074498 NM_130848	-19078	-	TSC_hg19_v1_chr5_-_134735578 BC013331 AF054174 NM_004893	-66422	-	BC008687 BC028226 NM_006161 TSC_hg19_v1_chr5_-_134871655 AB593107 AK314280	69651	-	AF086340 AF073957 AF144103 BT007080 AB528117 AM392840 AF106911 BC003513 AY358906 TSC_hg19_v1_chr5_-_134914682 AB543622 AK075514	112578	-	NM_004887	112973	-	AB161513|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##NM_001099221|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##BC074831|C5orf20|140947|chromosome 5 open reading frame 20##BC074832|C5orf20|140947|chromosome 5 open reading frame 20##BC069608|C5orf20|140947|chromosome 5 open reading frame 20##BC069610|C5orf20|140947|chromosome 5 open reading frame 20##BC117156|C5orf20|140947|chromosome 5 open reading frame 20##BC117158|C5orf20|140947|chromosome 5 open reading frame 20##AB074498|C5orf20|140947|chromosome 5 open reading frame 20##NM_130848|C5orf20|140947|chromosome 5 open reading frame 20##BC013331|H2AFY|9555|H2A histone family, member Y##AF054174|H2AFY|9555|H2A histone family, member Y##NM_004893|H2AFY|9555|H2A histone family, member Y##BC008687|NEUROG1|4762|neurogenin 1##BC028226|NEUROG1|4762|neurogenin 1##NM_006161|NEUROG1|4762|neurogenin 1##AB593107|NEUROG1|4762|neurogenin 1##AF086340|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF073957|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF144103|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BT007080|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AM392840|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF106911|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BC003513|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AY358906|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AB543622|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AK075514|CXCL14|9547|chemokine (C-X-C motif) ligand 14##NM_004887|CXCL14|9547|chemokine (C-X-C motif) ligand 14	0.989087	CTCF.p2:-18:0.989
chr11	57412398	57412504	reg1012364.p1	9.450	+	TSC_hg19_v1_chr11_+_57365695 GU727623 NM_001032295 BC011171 AB590526 AY732485 AY732486 BT006966 DQ891799 DQ894982	-46779	+	NM_000062 TSC_hg19_v1_chr11_+_57365157 AK303809 AK312626 AK293054 AK303840 AB209826 M13656 M13690	-47334	+	AK093462 TSC_hg19_v1_chr11_-_57335794 NM_198183	-76672	-	TSC_hg19_v1_chr11_-_57414981 BC111012	2562	-	BC029228 BC104781 BC112119 BC064995 AB098738 AK054775 AK124577 NM_145008	4880	-	NM_001142597 NM_006831 TSC_hg19_v1_chr11_+_57425244 AK313007 AK300232 BC000446	12779	+	GU727623|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##NM_001032295|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##BC011171|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AY732485|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AY732486|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##BT006966|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##DQ891799|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##DQ894982|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##NM_000062|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK303809|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK312626|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK293054|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK303840|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AB209826|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##M13656|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##M13690|SERPING1|710|serpin peptidase inhibitor, clade G (C1 inhibitor), member 1##AK093462|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##NM_198183|UBE2L6|9246|ubiquitin-conjugating enzyme E2L 6##BC111012|YPEL4|219539|yippee-like 4 (Drosophila)##BC029228|YPEL4|219539|yippee-like 4 (Drosophila)##BC104781|YPEL4|219539|yippee-like 4 (Drosophila)##BC112119|YPEL4|219539|yippee-like 4 (Drosophila)##BC064995|YPEL4|219539|yippee-like 4 (Drosophila)##AB098738|YPEL4|219539|yippee-like 4 (Drosophila)##AK054775|YPEL4|219539|yippee-like 4 (Drosophila)##AK124577|YPEL4|219539|yippee-like 4 (Drosophila)##NM_145008|YPEL4|219539|yippee-like 4 (Drosophila)##NM_001142597|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##NM_006831|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##AK313007|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##AK300232|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##BC000446|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	0.999006	CTCF.p2:4:0.999
chr1	204776173	204776312	reg1005993.p1	9.449	+	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	-121651	-	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	-290632	+	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	-290740	+	TSC_hg19_v1_chr1_+_204797779 BC040674 NM_001005388 NM_001005389 NM_001160332 NM_001160333 NM_015090 AK295291 AK299262 AK090639 AX746553	21570	+	TSC_hg19_v1_chr1_+_204839989 AK308686	63741	+	NM_001160331 BC137013 BC144454 BC144455 AB384522	137156	+	AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2##AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC040674|NFASC|23114|neurofascin##NM_001005388|NFASC|23114|neurofascin##NM_001005389|NFASC|23114|neurofascin##NM_001160332|NFASC|23114|neurofascin##NM_001160333|NFASC|23114|neurofascin##NM_015090|NFASC|23114|neurofascin##AK295291|NFASC|23114|neurofascin##AK299262|NFASC|23114|neurofascin##AK090639|NFASC|23114|neurofascin##AK308686|NFASC|23114|neurofascin##NM_001160331|NFASC|23114|neurofascin##BC137013|NFASC|23114|neurofascin##BC144454|NFASC|23114|neurofascin##BC144455|NFASC|23114|neurofascin	0.962216	CTCF.p2:12:0.962
chr4	120971146	120971272	reg1012524.p1	9.448	+	D89094 TSC_hg19_v1_chr4_-_120550167	-421047	-	AB527373 AM393036 AM393270 AM393448 AK290189 BC126233 AJ004865 AF155192 TSC_hg19_v1_chr4_-_120549960 AF043731 NM_001083	-421306	-	TSC_hg19_v1_chr4_-_120549121 AF155194 NM_033437	-422033	-	EU831987 EU832080 AB528692 AF394735 TSC_hg19_v1_chr4_-_120987954 U65410 BC070283 AJ000186 BC005945 BC000356 U31278 AK223433 AK313827 AK298228 NM_002358	16745	-	TSC_hg19_v1_chr4_-_121843992 AB464059 BC121037 BC121038 AK314293 AK310958 AF272897 AK056352 NM_018699 BC066942	872786	-	BC019351 AK289615 NM_024574 TSC_hg19_v1_chr4_-_121993690	1022421	-	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##EU831987|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##EU832080|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF394735|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC070283|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AJ000186|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC005945|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC000356|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK223433|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK313827|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK298228|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##NM_002358|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC121037|PRDM5|11107|PR domain containing 5##BC121038|PRDM5|11107|PR domain containing 5##AK314293|PRDM5|11107|PR domain containing 5##AK310958|PRDM5|11107|PR domain containing 5##AF272897|PRDM5|11107|PR domain containing 5##AK056352|PRDM5|11107|PR domain containing 5##NM_018699|PRDM5|11107|PR domain containing 5##BC066942|PRDM5|11107|PR domain containing 5##BC019351|NDNF|79625|neuron-derived neurotrophic factor##AK289615|NDNF|79625|neuron-derived neurotrophic factor##NM_024574|NDNF|79625|neuron-derived neurotrophic factor	0.998596	CTCF.p2:17:0.999
chr10	76498775	76498917	reg1013646.p3	9.447	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-562259	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-562316	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-562364	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	87508	+	AY686755 NM_001003892 BC137321 BC137322	319459	-	AB027004 AB103375 NM_016364	360401	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.354413	CTCF.p2:-18:0.354
chr1	231347172	231347310	reg1013209.p1	9.447	+	AK126782 NM_001004342 AY253917	-48547	+	TSC_hg19_v1_chr1_-_231176001 BC009447 NM_198552	-171250	-	TSC_hg19_v1_chr1_+_231114847 CU677601	-232377	+	CU691424 TSC_hg19_v1_chr1_-_231376913 BC053609 AK303359 BC036800 BC062353 NM_152379 AK055124	29655	-	NM_014236 TSC_hg19_v1_chr1_+_231376946	29691	+	TSC_hg19_v1_chr1_+_231376955 AK314181 AK297982	29713	+	AK126782|TRIM67|440730|tripartite motif containing 67##NM_001004342|TRIM67|440730|tripartite motif containing 67##AY253917|TRIM67|440730|tripartite motif containing 67##BC009447|FAM89A|375061|family with sequence similarity 89, member A##NM_198552|FAM89A|375061|family with sequence similarity 89, member A##BC053609|C1orf131|128061|chromosome 1 open reading frame 131##AK303359|C1orf131|128061|chromosome 1 open reading frame 131##BC036800|C1orf131|128061|chromosome 1 open reading frame 131##BC062353|C1orf131|128061|chromosome 1 open reading frame 131##NM_152379|C1orf131|128061|chromosome 1 open reading frame 131##AK055124|C1orf131|128061|chromosome 1 open reading frame 131##NM_014236|GNPAT|8443|glyceronephosphate O-acyltransferase##AK314181|GNPAT|8443|glyceronephosphate O-acyltransferase##AK297982|GNPAT|8443|glyceronephosphate O-acyltransferase	1.035785	CTCF.p2:7:0.990
chr5	75182166	75182276	reg1013073.p2	9.447	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-168961	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	-173959	-	NM_001130105	-374416	-	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	197050	+	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	516895	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	736924	-	BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001130105|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2	0.027854	
chr12	39712151	39712271	reg1012676.p2	9.446	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	-412828	-	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-1001586	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-5536738	+	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	124788	-	AK314254 NM_005164	301631	-	BC038754 NM_001031748 BC048120 AK097445	307784	+	AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40	0.999853	CTCF.p2:-10:1.000
chr13	36849460	36849558	reg1011849.p1	9.446	+	AB527575 AK000456 BC025383 NM_017826	-60801	-	NM_004734 TSC_hg19_v1_chr13_-_36705517	-143993	-	AK295102 TSC_hg19_v1_chr13_-_36705468	-144036	-	BC171867 BC146975 BC171872 BC171874 BC171880 BC171881 BC171882 BC171884 TSC_hg19_v1_chr13_-_36871939 AK131058 AK308999	22413	-	BC013944 TSC_hg19_v1_chr13_-_36872001 BC037403 AK301863 NM_001144981 NM_001144982 NM_001144983 NM_001144984 NM_001144985 NM_001144986 NM_001198908 NM_001198910	22483	-	TSC_hg19_v1_chr13_-_36920464 AK001949 AB011182 AY123329 BC047083	70932	-	AK000456|SOHLH2|54937|spermatogenesis and oogenesis specific basic helix-loop-helix 2##BC025383|SOHLH2|54937|spermatogenesis and oogenesis specific basic helix-loop-helix 2##NM_017826|SOHLH2|54937|spermatogenesis and oogenesis specific basic helix-loop-helix 2##NM_004734|DCLK1|9201|doublecortin-like kinase 1##AK295102|DCLK1|9201|doublecortin-like kinase 1##BC171867|CCDC169|728591|coiled-coil domain containing 169##BC146975|CCDC169|728591|coiled-coil domain containing 169##BC171872|CCDC169|728591|coiled-coil domain containing 169##BC171874|CCDC169|728591|coiled-coil domain containing 169##BC171880|CCDC169|728591|coiled-coil domain containing 169##BC171881|CCDC169|728591|coiled-coil domain containing 169##BC171882|CCDC169|728591|coiled-coil domain containing 169##BC171884|CCDC169|728591|coiled-coil domain containing 169##AK131058|CCDC169|728591|coiled-coil domain containing 169##AK308999|CCDC169|728591|coiled-coil domain containing 169##BC013944|CCDC169|728591|coiled-coil domain containing 169##BC037403|CCDC169|728591|coiled-coil domain containing 169##AK301863|CCDC169-SOHLH2|100526761|CCDC169-SOHLH2 readthrough##NM_001144981|CCDC169|728591|coiled-coil domain containing 169##NM_001144982|CCDC169|728591|coiled-coil domain containing 169##NM_001144983|CCDC169|728591|coiled-coil domain containing 169##NM_001144984|CCDC169|728591|coiled-coil domain containing 169##NM_001144985|CCDC169|728591|coiled-coil domain containing 169##NM_001144986|CCDC169|728591|coiled-coil domain containing 169##NM_001198908|CCDC169|728591|coiled-coil domain containing 169##NM_001198910|CCDC169-SOHLH2|100526761|CCDC169-SOHLH2 readthrough##AK001949|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##AB011182|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##AY123329|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##BC047083|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	0.82874	CTCF.p2:1:0.829
chr1	221082195	221082329	reg1013145.p1	9.445	+	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	-29163	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	-29348	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	-29501	+	NM_144728	828539	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	833146	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	833168	-	DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##NM_144728|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10	0.920081	CTCF.p2:-6:0.920
chr5	34958338	34958446	reg1011115.p1	9.445	+	TSC_hg19_v1_chr5_+_34929697 AY177688 AY258422 BC065745 NM_001012339 NM_194283	-28700	+	AK303311 TSC_hg19_v1_chr5_+_34915820 AK001962 BC006014 BC001546 NM_018321 AK289610 BX648902 DQ892108 DQ895302 AF347667 AY364243 AY364244	-42580	+	TSC_hg19_v1_chr5_-_34915716 AK002112 NM_002853	-42646	-	NM_031900	89847	-	NM_001204314 NM_001204315 NM_001204316 NM_001204317 NM_001204318	159831	-	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	272185	-	AY177688|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##AY258422|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##BC065745|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_001012339|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_194283|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##AK303311|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AK001962|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##BC006014|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##BC001546|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##NM_018321|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AK289610|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##BX648902|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##DQ892108|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##DQ895302|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AF347667|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AY364243|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AY364244|BRIX1|55299|BRX1, biogenesis of ribosomes, homolog (S. cerevisiae)##AK002112|RAD1|5810|RAD1 homolog (S. pombe)##NM_002853|RAD1|5810|RAD1 homolog (S. pombe)##NM_031900|AGXT2|64902|alanine--glyoxylate aminotransferase 2##NM_001204314|PRLR|5618|prolactin receptor##NM_001204315|PRLR|5618|prolactin receptor##NM_001204316|PRLR|5618|prolactin receptor##NM_001204317|PRLR|5618|prolactin receptor##NM_001204318|PRLR|5618|prolactin receptor##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor	0.912985	CTCF.p2:-2:0.913
chr8	20081400	20081519	reg1012256.p1	9.445	+	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	-26537	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	-26566	+	NM_001693 TSC_hg19_v1_chr8_+_20054882	-26667	+	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	31287	-	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	1564333	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	1564907	-	X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##NM_001693|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2	0.999173	CTCF.p2:-24:0.999
chr1	64157749	64157837	reg1011843.p1	9.444	+	NM_001172818 AK300100	-68900	+	AK293298 NM_001172819 AK298505	-98279	+	TSC_hg19_v1_chr1_+_64059081 AK294186 BC019920 NM_002633 BC001756 BC067763 AK312254 M83088 BC090856 DQ890618 DQ893786 CU676478 BT006961	-98768	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	81866	+	BC029895 NM_152489	511696	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	778725	+	NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##AK294186|PGM1|5236|phosphoglucomutase 1##BC019920|PGM1|5236|phosphoglucomutase 1##NM_002633|PGM1|5236|phosphoglucomutase 1##BC001756|PGM1|5236|phosphoglucomutase 1##BC067763|PGM1|5236|phosphoglucomutase 1##AK312254|PGM1|5236|phosphoglucomutase 1##M83088|PGM1|5236|phosphoglucomutase 1##BC090856|PGM1|5236|phosphoglucomutase 1##DQ890618|PGM1|5236|phosphoglucomutase 1##DQ893786|PGM1|5236|phosphoglucomutase 1##BT006961|PGM1|5236|phosphoglucomutase 1##AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_020925|CACHD1|57685|cache domain containing 1	0.734271	CTCF.p2:-13:0.734
chr2	96321349	96321458	reg1012585.p1	9.444	+	BC015353 NM_138800	-63638	+	NM_001164464	-170925	-	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	-252924	+	TSC_hg19_v1_chr2_-_96482383 BC117383 BC126153 AK057596	161042	-	TSC_hg19_v1_chr2_-_96657677 AK302433	336219	-	TSC_hg19_v1_chr2_+_96676311 BC015216	354921	+	BC015353|TRIM43|129868|tripartite motif containing 43##NM_138800|TRIM43|129868|tripartite motif containing 43##NM_001164464|TRIM43B|653192|tripartite motif containing 43B##AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##AK057596|LINC00342|150759|long intergenic non-protein coding RNA 342##AK302433|ANKRD36C|400986|ankyrin repeat domain 36C	0.784756	CTCF.p2:-9:0.785
chr4	46934132	46934223	reg1011776.p1	9.444	+	BC107855 BC035923 AX721204 NM_130902	-22940	-	AB209295 AK293466 S62907 TSC_hg19_v1_chr4_-_46391998 NM_000807	-542264	-	TSC_hg19_v1_chr4_-_46391484 AK307128	-542664	-	CU690038 DQ891679 DQ894864 EU176605 U30461 NM_001204266 NM_001204267 BC035055	61319	-	AK090780 NM_000809	62246	-	NM_000812 AK296023	99170	+	BC107855|COX7B2|170712|cytochrome c oxidase subunit VIIb2##BC035923|COX7B2|170712|cytochrome c oxidase subunit VIIb2##NM_130902|COX7B2|170712|cytochrome c oxidase subunit VIIb2##AB209295|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK293466|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##S62907|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_000807|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK307128|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##AK090780|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_000809|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_000812|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1##AK296023|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1	0.340109	CTCF.p2:-1:0.340
chr19	4525254	4525367	reg1013165.p1	9.443	+	NM_001080400	-7595	-	BC009449 TSC_hg19_v1_chr19_+_4488757	-36584	+	TSC_hg19_v1_chr19_+_4472263 NM_001001520 NM_032631 AY358600 AF294267 BC000755 CU674386 DQ892175 DQ895370	-52963	+	DQ839131 BC131524 BC033570 NM_001013706 TSC_hg19_v1_chr19_-_4535237	9910	-	AF403428 NM_052972 BC034389 AB073607 AK027382 AK303861 AK314506 TSC_hg19_v1_chr19_-_4540049	14734	-	AK127689 BC070198 TSC_hg19_v1_chr19_-_4540114	14790	-	NM_001080400|PLIN4|729359|perilipin 4##BC009449|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##NM_001001520|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##NM_032631|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##AY358600|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##AF294267|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##BC000755|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##DQ892175|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##DQ895370|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##DQ839131|PLIN5|440503|perilipin 5##BC131524|PLIN5|440503|perilipin 5##BC033570|PLIN5|440503|perilipin 5##NM_001013706|PLIN5|440503|perilipin 5##AF403428|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_052972|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##BC034389|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AB073607|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK027382|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK303861|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK314506|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##BC070198|LRG1|116844|leucine-rich alpha-2-glycoprotein 1	0.996982	CTCF.p2:6:0.997
chrX	118622825	118622938	reg1010398.p1	9.443	+	TSC_hg19_v1_chrX_+_118602407 BC068199 J02683 BC056160 CU691128	-20447	+	NM_001152 TSC_hg19_v1_chrX_+_118602390 AK315292	-20505	+	TSC_hg19_v1_chrX_+_118533353 AK091304 AK303932 AX746905 AK292035 CU676444 AL590525	-89475	+	CU692786 TSC_hg19_v1_chrX_-_118699348 AK096297 BC023506 AK026618 AK298877 NM_001170569	76463	-	TSC_hg19_v1_chrX_-_118699373 NM_001170570 NM_022101	76503	-	TSC_hg19_v1_chrX_+_118708527 AK301675 NM_003336 NM_181762 D28459 AK313092 AK223045 AK297696 AK223064	85624	+	BC068199|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##J02683|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##BC056160|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##NM_001152|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##AK315292|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##AK091304|SLC25A43|203427|solute carrier family 25, member 43##AK303932|SLC25A43|203427|solute carrier family 25, member 43##AK292035|SLC25A43|203427|solute carrier family 25, member 43##AL590525|SLC25A43|203427|solute carrier family 25, member 43##AK096297|CXorf56|63932|chromosome X open reading frame 56##BC023506|CXorf56|63932|chromosome X open reading frame 56##AK026618|CXorf56|63932|chromosome X open reading frame 56##AK298877|CXorf56|63932|chromosome X open reading frame 56##NM_001170569|CXorf56|63932|chromosome X open reading frame 56##NM_001170570|CXorf56|63932|chromosome X open reading frame 56##NM_022101|CXorf56|63932|chromosome X open reading frame 56##AK301675|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_003336|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181762|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D28459|UBE2A|7319|ubiquitin-conjugating enzyme E2A##AK313092|UBE2A|7319|ubiquitin-conjugating enzyme E2A##AK223045|UBE2A|7319|ubiquitin-conjugating enzyme E2A##AK297696|UBE2A|7319|ubiquitin-conjugating enzyme E2A##AK223064|UBE2A|7319|ubiquitin-conjugating enzyme E2A	0.923795	CTCF.p2:24:0.924
chr11	119512872	119512999	reg1012666.p2	9.442	+	BC037832 NM_006288	-218692	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-219026	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	-260536	-	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	86447	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	486611	-	AK299472 TSC_hg19_v1_chr11_-_120008323	495337	-	BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29	0.968642	CTCF.p2:-11:0.969
chr12	128554065	128554207	reg1015418.p1	9.442	+	NM_052907	-2742975	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-3004068	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-3004195	+	NM_001136103	197811	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	754307	-	BC043528 TSC_hg19_v1_chr12_+_129337985	783848	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.999774	CTCF.p2:18:0.981
chr8	11422149	11422292	reg1013705.p2	9.442	+	S76617 NM_001715 BC018703 BC004473 BC038555	-70627	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-97991	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-217216	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	139500	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	205048	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	237964	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.885851	CTCF.p2:12:0.886
chrX	32549089	32549196	reg1012707.p2	9.442	+	NM_004011 NM_004012	-118772	-	L35854 NM_004013 NM_004020 NM_004021 NM_004022 NM_004023	-375557	-	NM_004014 S62617	-1022728	-	NM_004010 S81419 NM_004009 S64152	597401	-	S60972 X14298 AK309142 TSC_hg19_v1_chrX_-_33229631 M18533 BC010932 NM_004006	680408	-	NM_000109	808583	-	NM_004011|DMD|1756|dystrophin##NM_004012|DMD|1756|dystrophin##L35854|DMD|1756|dystrophin##NM_004013|DMD|1756|dystrophin##NM_004020|DMD|1756|dystrophin##NM_004021|DMD|1756|dystrophin##NM_004022|DMD|1756|dystrophin##NM_004023|DMD|1756|dystrophin##NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin##NM_004010|DMD|1756|dystrophin##S81419|DMD|1756|dystrophin##NM_004009|DMD|1756|dystrophin##S64152|DMD|1756|dystrophin##S60972|DMD|1756|dystrophin##X14298|DMD|1756|dystrophin##AK309142|DMD|1756|dystrophin##M18533|DMD|1756|dystrophin##BC010932|DMD|1756|dystrophin##NM_004006|DMD|1756|dystrophin##NM_000109|DMD|1756|dystrophin	0.920751	CTCF.p2:-23:0.921
chr2	49718033	49718179	reg1013015.p1	9.441	+	AY429104 BC096831 X68044 JN003607 BC118548 BC125270 M65085 S59900 M95489 AK292562 AK310367 NM_000145 NM_181446	-336496	-	S57793 M63108 M73746 AK123498 NM_000233	-735262	-	AK302220 NM_001193487 NM_006872 BC025991 AK223350 AF106857 CU693090 DQ891566 DQ894756 BC064585	-873131	+	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	856816	-	TSC_hg19_v1_chr2_-_51259258 BC046631	1541152	-	EF539882 AK124726 NM_001135659 NM_004801	1541498	-	AY429104|FSHR|2492|follicle stimulating hormone receptor##BC096831|FSHR|2492|follicle stimulating hormone receptor##X68044|FSHR|2492|follicle stimulating hormone receptor##JN003607|FSHR|2492|follicle stimulating hormone receptor##BC118548|FSHR|2492|follicle stimulating hormone receptor##BC125270|FSHR|2492|follicle stimulating hormone receptor##M65085|FSHR|2492|follicle stimulating hormone receptor##S59900|FSHR|2492|follicle stimulating hormone receptor##M95489|FSHR|2492|follicle stimulating hormone receptor##AK292562|FSHR|2492|follicle stimulating hormone receptor##AK310367|FSHR|2492|follicle stimulating hormone receptor##NM_000145|FSHR|2492|follicle stimulating hormone receptor##NM_181446|FSHR|2492|follicle stimulating hormone receptor##S57793|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M63108|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M73746|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK123498|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##NM_000233|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like##BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like##AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like##AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like##BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like##AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##BC046631|NRXN1|9378|neurexin 1##EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1	0.454363	CTCF.p2:4:0.454
chr4	72050041	72050165	reg1013561.p1	9.441	+	M60527 TSC_hg19_v1_chr4_+_71859434 BC114617 JF806429 BT019941 BT019942 CR536527 CR541876	-190632	+	TSC_hg19_v1_chr4_+_71859320 NM_000788 AK303292 AK313523 BC103764	-190796	+	NM_001244766 NM_001244767 NM_173468 AK093545 AX748194 TSC_hg19_v1_chr4_+_71768085 AK299481 BC038112 AK313513	-281990	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	2620	+	AF069510 AB470072 AF053753 AF053754 AF310248 EF531618 TSC_hg19_v1_chr4_+_72102322	52183	+	BC030977 NM_003759 AF007216 AK308038 CU689062	154764	+	M60527|DCK|1633|deoxycytidine kinase##BC114617|DCK|1633|deoxycytidine kinase##JF806429|DCK|1633|deoxycytidine kinase##BT019941|DCK|1633|deoxycytidine kinase##BT019942|DCK|1633|deoxycytidine kinase##CR536527|DCK|1633|deoxycytidine kinase##CR541876|DCK|1633|deoxycytidine kinase##NM_000788|DCK|1633|deoxycytidine kinase##AK303292|DCK|1633|deoxycytidine kinase##AK313523|DCK|1633|deoxycytidine kinase##BC103764|DCK|1633|deoxycytidine kinase##NM_001244766|MOB1B|92597|MOB kinase activator 1B##NM_001244767|MOB1B|92597|MOB kinase activator 1B##NM_173468|MOB1B|92597|MOB kinase activator 1B##AK093545|MOB1B|92597|MOB kinase activator 1B##AK299481|MOB1B|92597|MOB kinase activator 1B##BC038112|MOB1B|92597|MOB kinase activator 1B##AK313513|MOB1B|92597|MOB kinase activator 1B##AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	0.919494	CTCF.p2:3:0.919
chr6	99778085	99778236	reg1014351.p1	9.441	+	TSC_hg19_v1_chr6_-_99395817 AK313076 BC055010 BC039819 NM_012160	-382333	-	TSC_hg19_v1_chr6_-_99395800 BC091484 BC032641	-382371	-	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	-495488	+	BC004869 BC011583 NM_032511	19370	-	AF193016 BC015634 BC001534 BC063463 CU687730 AB590714 AF351615 AK056955 AL136726 NM_017421	63893	-	AF314185 TSC_hg19_v1_chr6_-_99849313 AL080186	71131	-	AK313076|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC055010|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC039819|FBXL4|26235|F-box and leucine-rich repeat protein 4##NM_012160|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC091484|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC032641|FBXL4|26235|F-box and leucine-rich repeat protein 4##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2##BC004869|C6orf168|84553|chromosome 6 open reading frame 168##BC011583|C6orf168|84553|chromosome 6 open reading frame 168##NM_032511|C6orf168|84553|chromosome 6 open reading frame 168##AF193016|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC015634|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC001534|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC063463|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AF351615|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AK056955|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AL136726|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##NM_017421|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AF314185|PNISR|25957|PNN-interacting serine/arginine-rich protein##AL080186|PNISR|25957|PNN-interacting serine/arginine-rich protein	0.998115	CTCF.p2:-17:0.998
chr9	107444938	107445055	reg1009772.p1	9.441	+	AB463958 NM_001001956	-64512	-	AB529292 NM_001004481 BC136824 BC136826	-77068	-	NM_001004482 BC136842 BC136843	-83256	-	BC140916 AB587601 NM_001004484	11684	+	TSC_hg19_v1_chr9_+_107509977 BC005935 NM_015469 AK301410 AF161417 AK024015 AL117557 BC045830 CU675195	65014	+	AK002137 BC017914 BX647652 NM_018376 AK310397 BC005202	81456	+	NM_001001956|OR13C9|286362|olfactory receptor, family 13, subfamily C, member 9##NM_001004481|OR13C2|392376|olfactory receptor, family 13, subfamily C, member 2##BC136824|OR13C2|392376|olfactory receptor, family 13, subfamily C, member 2##BC136826|OR13C2|392376|olfactory receptor, family 13, subfamily C, member 2##NM_001004482|OR13C5|138799|olfactory receptor, family 13, subfamily C, member 5##BC136842|OR13C5|138799|olfactory receptor, family 13, subfamily C, member 5##BC136843|OR13C5|138799|olfactory receptor, family 13, subfamily C, member 5##BC140916|OR13D1|286365|olfactory receptor, family 13, subfamily D, member 1##NM_001004484|OR13D1|286365|olfactory receptor, family 13, subfamily D, member 1##BC005935|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##NM_015469|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AK301410|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AF161417|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AK024015|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AL117557|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##BC045830|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AK002137|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC017914|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BX647652|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##NM_018376|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##AK310397|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC005202|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)	0.991121	CTCF.p2:29:0.991
chr20	49252551	49252671	reg1015086.p1	9.439	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	-125606	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-125679	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-125692	+	AK056792 NM_080829	814	-	TSC_hg19_v1_chr20_-_49308074 AK124347	55466	-	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	95458	+	BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	0.535014	CTCF.p2:6:0.535
chr13	47405875	47406016	reg1012283.p1	9.438	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	-34630	-	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-278438	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-278525	+	AK314132 BX647777 AK302787 NM_000621 NM_001165947	65122	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1169506	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	1205869	+	BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15	0.394019	CTCF.p2:-22:0.394
chr17	3586615	3586756	reg1001550.p2	9.438	+	NM_001014764 NM_031298 TSC_hg19_v1_chr17_+_3572105 BC001409	-14583	+	TSC_hg19_v1_chr17_-_3571905 AF028823 NM_001204698 NM_014604	-14747	-	AB590842 CU692828 TSC_hg19_v1_chr17_-_3571873 AF277318 BC035653 U90913 AF234997 AK001327 AK315408 BC023980	-14837	-	DQ234349 CU691640 AB528606 TSC_hg19_v1_chr17_-_3599311 AF070573 AF016709 U49395 U49396	12627	-	BC006220 BC028084 TSC_hg19_v1_chr17_-_3599406 BC039015	12719	-	AB209623 BC016917 AK307959 TSC_hg19_v1_chr17_-_3599535 BC008319 AK290889 NM_001204519 NM_001204520 NM_002561 NM_175080	12907	-	NM_001014764|TMEM93|83460|transmembrane protein 93##NM_031298|TMEM93|83460|transmembrane protein 93##BC001409|TMEM93|83460|transmembrane protein 93##AF028823|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##NM_001204698|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##NM_014604|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##AF277318|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##U90913|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##AF234997|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##AK001327|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##AK315408|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##BC023980|TAX1BP3|30851|Tax1 (human T-cell leukemia virus type I) binding protein 3##DQ234349|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AF070573|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AF016709|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##U49395|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##U49396|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC006220|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC028084|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC039015|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AB209623|P2RX5-TAX1BP3|100533970|P2RX5-TAX1BP3 readthrough##BC016917|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK307959|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC008319|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK290889|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204519|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204520|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_002561|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_175080|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5	0.042054	
chr20	2505137	2505271	reg1015320.p1	9.438	+	AK096911 NM_024325	-15427	-	BC002897 TSC_hg19_v1_chr20_-_2489551	-15641	-	TSC_hg19_v1_chr20_-_2451439 BC003530 J04564 NM_003091 NM_198216	-53731	-	AF417580 NM_080751 AB463320	12054	+	BC104791 BC104793 NM_006392 TSC_hg19_v1_chr20_+_2633277 AK292721 BX647439 BC035369	128047	+	AL050094 TSC_hg19_v1_chr20_-_2641583	136332	-	AK096911|ZNF343|79175|zinc finger protein 343##NM_024325|ZNF343|79175|zinc finger protein 343##BC002897|ZNF343|79175|zinc finger protein 343##BC003530|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##J04564|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##NM_003091|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##NM_198216|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AF417580|TMC2|117532|transmembrane channel-like 2##NM_080751|TMC2|117532|transmembrane channel-like 2##BC104791|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##BC104793|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##NM_006392|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##AK292721|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##BX647439|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##BC035369|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	0.994622	CTCF.p2:2:0.995
chr3	117126295	117126425	reg1015600.p1	9.438	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-961987	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-962029	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-1783941	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	1627173	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	1627323	-	AK097667 NM_152538 AK292387	1738537	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.0	
chr16	68297985	68298118	reg1011838.p1	9.437	+	AB017494 TSC_hg19_v1_chr16_+_68279299 AY358425 EU832326	-18740	+	AK300596 AK074828 NM_012320 TSC_hg19_v1_chr16_+_68279275 AK296263 AK298494 AL110209 BC062605 AK001705 AK222790	-18801	+	CU688826 BC030146 BC052309 TSC_hg19_v1_chr16_-_68270026 AK025571 NM_024939	-28010	-	TSC_hg19_v1_chr16_+_68298430 NM_001076785 NM_003983 CR749291 CR749475 AK310866 BC028216	399	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	46775	-	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	46908	+	AB017494|PLA2G15|23659|phospholipase A2, group XV##AY358425|PLA2G15|23659|phospholipase A2, group XV##EU832326|PLA2G15|23659|phospholipase A2, group XV##AK300596|PLA2G15|23659|phospholipase A2, group XV##AK074828|PLA2G15|23659|phospholipase A2, group XV##NM_012320|PLA2G15|23659|phospholipase A2, group XV##AK296263|PLA2G15|23659|phospholipase A2, group XV##AK298494|PLA2G15|23659|phospholipase A2, group XV##AL110209|PLA2G15|23659|phospholipase A2, group XV##BC062605|PLA2G15|23659|phospholipase A2, group XV##AK001705|PLA2G15|23659|phospholipase A2, group XV##AK222790|PLA2G15|23659|phospholipase A2, group XV##BC030146|ESRP2|80004|epithelial splicing regulatory protein 2##BC052309|ESRP2|80004|epithelial splicing regulatory protein 2##AK025571|ESRP2|80004|epithelial splicing regulatory protein 2##NM_024939|ESRP2|80004|epithelial splicing regulatory protein 2##NM_001076785|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##NM_003983|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749291|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749475|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK310866|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC028216|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7	0.420556	CTCF.p2:14:0.421
chr17	72297426	72297547	reg1011546.p1	9.437	+	BC039582 NM_001172810 NM_023036 BC033013 AF250288	-27080	+	BX647912 NM_052869	-52982	+	TSC_hg19_v1_chr17_+_72209709 NM_032646 BC107492 BC107602 AK315163 AF319952 BC005168	-87817	+	NM_153209 TSC_hg19_v1_chr17_+_72322355 BC067749 BC026362 BC110989 AK094619 BC143327 BC093631 BC104852	24921	+	NM_001080466	60471	-	BC143807 AB196530 AB528868 AY288421 NM_181790	66108	+	BC039582|DNAI2|64446|dynein, axonemal, intermediate chain 2##NM_001172810|DNAI2|64446|dynein, axonemal, intermediate chain 2##NM_023036|DNAI2|64446|dynein, axonemal, intermediate chain 2##BC033013|DNAI2|64446|dynein, axonemal, intermediate chain 2##AF250288|DNAI2|64446|dynein, axonemal, intermediate chain 2##BX647912|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_052869|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_032646|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107492|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107602|TTYH2|94015|tweety homolog 2 (Drosophila)##AK315163|TTYH2|94015|tweety homolog 2 (Drosophila)##AF319952|TTYH2|94015|tweety homolog 2 (Drosophila)##BC005168|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_153209|KIF19|124602|kinesin family member 19##BC067749|KIF19|124602|kinesin family member 19##BC026362|KIF19|124602|kinesin family member 19##BC110989|KIF19|124602|kinesin family member 19##AK094619|KIF19|124602|kinesin family member 19##BC143327|KIF19|124602|kinesin family member 19##BC093631|KIF19|124602|kinesin family member 19##BC104852|KIF19|124602|kinesin family member 19##NM_001080466|BTBD17|388419|BTB (POZ) domain containing 17##BC143807|GPR142|350383|G protein-coupled receptor 142##AB196530|GPR142|350383|G protein-coupled receptor 142##AY288421|GPR142|350383|G protein-coupled receptor 142##NM_181790|GPR142|350383|G protein-coupled receptor 142	0.999676	CTCF.p2:-7:1.000
chr2	69952023	69952203	reg1000738.p2	9.437	+	NM_014911 TSC_hg19_v1_chr2_-_69871063 BC090950	-81021	-	TSC_hg19_v1_chr2_-_69870872 AB028971	-81256	-	TSC_hg19_v1_chr2_-_69870783 AK310951 AK056043	-81345	-	BC063672 NM_001153 BC000182 TSC_hg19_v1_chr2_+_69969232 AK293177	17057	+	BC011659 TSC_hg19_v1_chr2_+_69969265 AK293406 AK303960 AK058017 AK315511 AK293396 M19383 M82809	17152	+	AK024042 TSC_hg19_v1_chr2_+_70056791 BC007420 NM_178439 AK023119	104694	+	NM_014911|AAK1|22848|AP2 associated kinase 1##BC090950|AAK1|22848|AP2 associated kinase 1##AB028971|AAK1|22848|AP2 associated kinase 1##AK310951|AAK1|22848|AP2 associated kinase 1##AK056043|AAK1|22848|AP2 associated kinase 1##BC063672|ANXA4|307|annexin A4##NM_001153|ANXA4|307|annexin A4##BC000182|ANXA4|307|annexin A4##AK293177|ANXA4|307|annexin A4##BC011659|ANXA4|307|annexin A4##AK293406|ANXA4|307|annexin A4##AK303960|ANXA4|307|annexin A4##AK058017|ANXA4|307|annexin A4##AK315511|ANXA4|307|annexin A4##AK293396|ANXA4|307|annexin A4##M19383|ANXA4|307|annexin A4##M82809|ANXA4|307|annexin A4##AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)	0.0	
chr3	141681525	141681650	reg1011625.p1	9.437	+	TSC_hg19_v1_chr3_+_141595539 U51478 CU680074	-86010	+	TSC_hg19_v1_chr3_+_141595484 NM_001679 AK131061 AK293697 BC001469 BC011835	-86150	+	DQ426875 AF439409 AF282269 NM_139209 AB527155	-184551	+	AL080206 NM_001178140	37621	-	BC002405 AK303634 U18422 BC007976 AK303181 TSC_hg19_v1_chr3_-_141747469 NM_001178141 NM_001178142 NM_006286	65883	-	TSC_hg19_v1_chr3_-_141868338 AK314786 BC013993 U35117 NM_001178138 NM_001178139	186737	-	U51478|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##NM_001679|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK131061|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK293697|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##BC001469|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##BC011835|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AF439409|GRK7|131890|G protein-coupled receptor kinase 7##AF282269|GRK7|131890|G protein-coupled receptor kinase 7##NM_139209|GRK7|131890|G protein-coupled receptor kinase 7##AL080206|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178140|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK314786|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC013993|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U35117|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178138|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178139|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	0.971064	CTCF.p2:-15:0.971
chr12	44351682	44351806	reg1013708.p1	9.436	+	TSC_hg19_v1_chr12_+_44229883 BC042192 BC060798 AK057287 BC030284 AL136855 NM_032256	-121838	+	AK127868 BT019691 CR541736 CR541761 AB209302 AB384914 TSC_hg19_v1_chr12_-_44200120 AK291223 BC022491 BC022344 U02680 BC068548 EU832120 EU832214 AK297206 BC043148 NM_001242397 NM_002822	-151632	-	TSC_hg19_v1_chr12_+_44152777 BC013316 AY340962 AY340963 AY340964 AY340965 AY340966 AY340967 AF155118 AK000528	-198965	+	D89629 AK315960 AK299277 NM_001145109	917647	-	BC020544 TSC_hg19_v1_chr12_-_45269991	918233	-	TSC_hg19_v1_chr12_-_45270099 AK056082 AK297521 AK309825 D83018	918361	-	BC042192|TMEM117|84216|transmembrane protein 117##BC060798|TMEM117|84216|transmembrane protein 117##AK057287|TMEM117|84216|transmembrane protein 117##BC030284|TMEM117|84216|transmembrane protein 117##AL136855|TMEM117|84216|transmembrane protein 117##NM_032256|TMEM117|84216|transmembrane protein 117##AK127868|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BT019691|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541736|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541761|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AB209302|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK291223|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022491|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022344|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##U02680|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC068548|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832120|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832214|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK297206|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC043148|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_001242397|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_002822|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC013316|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340962|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340963|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340964|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340965|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340966|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340967|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AF155118|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK000528|IRAK4|51135|interleukin-1 receptor-associated kinase 4##D89629|NELL2|4753|NEL-like 2 (chicken)##AK315960|NELL2|4753|NEL-like 2 (chicken)##AK299277|NELL2|4753|NEL-like 2 (chicken)##NM_001145109|NELL2|4753|NEL-like 2 (chicken)##BC020544|NELL2|4753|NEL-like 2 (chicken)##AK056082|NELL2|4753|NEL-like 2 (chicken)##AK297521|NELL2|4753|NEL-like 2 (chicken)##AK309825|NELL2|4753|NEL-like 2 (chicken)##D83018|NELL2|4753|NEL-like 2 (chicken)	0.937794	CTCF.p2:-6:0.938
chr6	58296953	58297062	reg1013276.p1	9.436	+	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	-9328	-	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	-1114592	+	TSC_hg19_v1_chr6_-_57087081 AF161486 BC015021 NM_016277 CR749371 AK311123	-1209936	-	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	4698994	-	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	5732857	-	TSC_hg19_v1_chr6_+_64231650 CR749458	5934648	+	BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AF161486|RAB23|51715|RAB23, member RAS oncogene family##BC015021|RAB23|51715|RAB23, member RAS oncogene family##NM_016277|RAB23|51715|RAB23, member RAS oncogene family##CR749371|RAB23|51715|RAB23, member RAS oncogene family##AK311123|RAB23|51715|RAB23, member RAS oncogene family##AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	0.010078	
chr17	32254974	32255108	reg1012959.p1	9.435	+	AL834182 NM_183377	-635036	-	AF216311 NM_173847 BC100886 BC100887	-936139	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-999838	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	228646	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	327290	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	342232	+	AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7	0.434495	CTCF.p2:17:0.434
chr13	101374304	101374435	reg1012189.p1	9.434	+	NM_001079669 NM_032813 TSC_hg19_v1_chr13_-_101327108	-47260	-	AK299859 TSC_hg19_v1_chr13_-_101327050 BX648008 AK056409 AK290345 BX647956	-47313	-	TSC_hg19_v1_chr13_-_101241029 AK095850 NM_001195087	-133342	-	AY141972 AK094669 BC012128 NM_052867 TSC_hg19_v1_chr13_-_102068817	694392	-	TSC_hg19_v1_chr13_-_102068838 BC028390	694471	-	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	730626	+	NM_001079669|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##NM_032813|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK095850|A2LD1|87769|AIG2-like domain 1##NM_001195087|A2LD1|87769|AIG2-like domain 1##AY141972|NALCN|259232|sodium leak channel, non-selective##AK094669|NALCN|259232|sodium leak channel, non-selective##BC012128|NALCN|259232|sodium leak channel, non-selective##NM_052867|NALCN|259232|sodium leak channel, non-selective##BC028390|NALCN|259232|sodium leak channel, non-selective##AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	0.970302	CTCF.p2:-10:0.970
chr3	17074029	17074178	reg1016043.p1	9.434	+	BC036392 NM_015184	-99522	+	AB029015 NM_001144382	-147652	+	U65918 U66726 U66078 BC027595 NM_001351	-427137	-	AK310539 NM_001134381	667408	-	D86965 NM_014744	708295	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	710064	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.0	
chr7	54856397	54856521	reg1012435.p1	9.434	+	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	-29538	-	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	-29580	-	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	-246377	+	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	230286	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	230487	+	AK095857 NM_018697	576681	+	AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit##NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor##AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	0.084899	
chr15	68128824	68128974	reg1011216.p2	9.433	+	NM_001031807	-10959	+	AK293459 NM_001206804	-287558	+	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	-293877	+	AF167160 NM_016166 BC118587 BC121797 TSC_hg19_v1_chr15_+_68346652 AK314515 BC104646	217713	+	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	217762	+	TSC_hg19_v1_chr15_-_68497633 BX640702 BC009516 AK092628 AK296804 AX747637	368738	-	NM_001031807|SKOR1|390598|SKI family transcriptional corepressor 1##AK293459|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_001206804|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5##AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1##NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1##BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1##BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1##AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1##BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1##BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1##BX640702|CALML4|91860|calmodulin-like 4##BC009516|CALML4|91860|calmodulin-like 4##AK092628|CALML4|91860|calmodulin-like 4##AK296804|CALML4|91860|calmodulin-like 4	0.456218	CTCF.p2:6:0.456
chr1	86484124	86484247	reg1013167.p2	9.433	+	TSC_hg19_v1_chr1_-_86174088 AL442074 BC026236 AK298149 NM_001170670 NM_017953	-310072	-	EU446811 AK000767 TSC_hg19_v1_chr1_-_86174035 BC110898 AK314566	-310179	-	TSC_hg19_v1_chr1_+_86046443 AK223385 AK295430 AK314571 NM_001554 BC016952 Y12084 Z98053 Y11307 BC009199 U62015 BC001271 AF003594 AF031385 DQ891262 DQ894449 AB587390 CR536519 CU677777	-437634	+	BC116180 BC113654 BC117170 BC143715 BC143717 BC143718 AY244357 NM_152890	137928	-	BC091490 TSC_hg19_v1_chr1_-_86862004 AB033055 BC047368 BC009779 BC012579 AK308351 AK302792 BC026105 AK303209 NM_001007022 NM_001184765 NM_001184766 NM_020729	377790	-	NM_006536 AF043977 AK296719 AK290348 AK307937 BC041096 AB026833 AF127980	405664	+	AL442074|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC026236|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK298149|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_001170670|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_017953|ZNHIT6|54680|zinc finger, HIT-type containing 6##EU446811|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK000767|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC110898|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK314566|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61##NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61##Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61##Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61##Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61##U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61##DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61##DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61##CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC116180|COL24A1|255631|collagen, type XXIV, alpha 1##BC113654|COL24A1|255631|collagen, type XXIV, alpha 1##BC117170|COL24A1|255631|collagen, type XXIV, alpha 1##BC143715|COL24A1|255631|collagen, type XXIV, alpha 1##BC143717|COL24A1|255631|collagen, type XXIV, alpha 1##BC143718|COL24A1|255631|collagen, type XXIV, alpha 1##AY244357|COL24A1|255631|collagen, type XXIV, alpha 1##NM_152890|COL24A1|255631|collagen, type XXIV, alpha 1##BC091490|ODF2L|57489|outer dense fiber of sperm tails 2-like##AB033055|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC047368|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC009779|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC012579|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK308351|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK302792|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC026105|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK303209|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001007022|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184765|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184766|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_020729|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_006536|CLCA2|9635|chloride channel accessory 2##AF043977|CLCA2|9635|chloride channel accessory 2##AK290348|CLCA2|9635|chloride channel accessory 2##AK307937|CLCA2|9635|chloride channel accessory 2##BC041096|CLCA2|9635|chloride channel accessory 2##AB026833|CLCA2|9635|chloride channel accessory 2##AF127980|CLCA2|9635|chloride channel accessory 2	0.993613	CTCF.p2:-6:0.994
chr16	66762170	66762319	reg1012722.p1	9.432	+	TSC_hg19_v1_chr16_-_66730647 BC093679 AF479814 AF521889 AF521890 NM_178818 NM_181521	-31612	-	TSC_hg19_v1_chr16_+_66638658 BC023509 BC023591	-123564	+	TSC_hg19_v1_chr16_+_66638636 AY166714	-123603	+	TSC_hg19_v1_chr16_-_66785505 AK304233 AF035812 BC025959 AK291766 AK303031 BX648863	23248	-	BC010928 TSC_hg19_v1_chr16_-_66785513 AK295049 NM_006141	23318	-	AK093213 AX747993 NM_001136505	73278	-	BC093679|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF479814|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521889|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521890|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_178818|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_181521|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##BC023509|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC023591|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##AK304233|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AF035812|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC025959|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK291766|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK303031|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BX648863|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC010928|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK295049|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##NM_006141|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK093213|CCDC79|283847|coiled-coil domain containing 79##NM_001136505|CCDC79|283847|coiled-coil domain containing 79	1.22363	CTCF.p2:-9:0.998	CTCF.p2:-56:0.226
chr20	6563884	6564013	reg1013049.p1	9.432	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-459785	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-460071	-	TSC_hg19_v1_chr20_-_6103678 AK314394 BC040545 AF443278	-460274	-	BC069214 NM_001200	184796	+	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	1357154	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	1436352	-	AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AK314394|FERMT1|55612|fermitin family member 1##BC040545|FERMT1|55612|fermitin family member 1##AF443278|FERMT1|55612|fermitin family member 1##BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4	0.997594	CTCF.p2:-13:0.998
chr2	68452481	68452599	reg1015354.p1	9.432	+	TSC_hg19_v1_chr2_+_68384999 BC008304 NM_020143 AK291715 AF349314 AF164799 AK313204 AK223118 L48692 AK225641 BC018152	-67443	+	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	-67906	-	NM_001190263 NM_001190265 NM_006333 NM_173177 TSC_hg19_v1_chr2_-_68290160	-162380	-	TSC_hg19_v1_chr2_-_68479665 AK307136 AK314893 BC027913 NM_000945	27055	-	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	94560	-	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	139832	+	BC008304|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_020143|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK291715|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF349314|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF164799|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK313204|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK223118|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK225641|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##BC018152|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92##NM_001190263|C1D|10438|C1D nuclear receptor corepressor##NM_001190265|C1D|10438|C1D nuclear receptor corepressor##NM_006333|C1D|10438|C1D nuclear receptor corepressor##NM_173177|C1D|10438|C1D nuclear receptor corepressor##AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin	0.56528	CTCF.p2:0:0.565
chr20	45848844	45848943	reg1012890.p2	9.430	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	-325341	+	TSC_hg19_v1_chr20_+_45523505 BC008803	-325385	+	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	-325611	+	TSC_hg19_v1_chr20_-_45927496 BC030721	78676	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	127754	-	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	136595	-	AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8	0.998073	CTCF.p2:2:0.998
chr12	133386119	133386221	reg1012257.p1	9.429	+	BC048203 TSC_hg19_v1_chr12_-_133372555	-13613	-	TSC_hg19_v1_chr12_-_133338419 BC043157 NM_015114	-47750	-	AK025933 TSC_hg19_v1_chr12_-_133306584	-79612	-	TSC_hg19_v1_chr12_-_133404955 D63997 AB027133	18809	-	TSC_hg19_v1_chr12_-_133405400 NM_005895	19128	-	TSC_hg19_v1_chr12_-_133405429 BC142658 BC146675 NM_001172557 BC060826	19292	-	BC043157|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##NM_015114|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##AK025933|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##D63997|GOLGA3|2802|golgin A3##AB027133|GOLGA3|2802|golgin A3##NM_005895|GOLGA3|2802|golgin A3##BC142658|GOLGA3|2802|golgin A3##BC146675|GOLGA3|2802|golgin A3##NM_001172557|GOLGA3|2802|golgin A3##BC060826|GOLGA3|2802|golgin A3	0.830068	CTCF.p2:-1:0.830
chr1	38401794	38401908	reg1015089.p1	9.429	+	TSC_hg19_v1_chr1_-_38397424 AK022846	-4416	-	TSC_hg19_v1_chr1_-_38325265 X78710 AK225923 AK298751 AK309584 AK314233 BC014454 NM_005955	-76593	-	AY517499 TSC_hg19_v1_chr1_+_38273967 BC107856 BC057819 AK127381 BC102041 BC127187 BC127188 BC141938	-127941	+	TSC_hg19_v1_chr1_-_38412689 AL833055 BC058932	10831	-	TSC_hg19_v1_chr1_-_38412717 BC062317 AK310824	10860	-	TSC_hg19_v1_chr1_-_38412723 M74161	10870	-	AK022846|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##X78710|MTF1|4520|metal-regulatory transcription factor 1##AK225923|MTF1|4520|metal-regulatory transcription factor 1##AK298751|MTF1|4520|metal-regulatory transcription factor 1##AK309584|MTF1|4520|metal-regulatory transcription factor 1##AK314233|MTF1|4520|metal-regulatory transcription factor 1##BC014454|MTF1|4520|metal-regulatory transcription factor 1##NM_005955|MTF1|4520|metal-regulatory transcription factor 1##AY517499|C1orf122|127687|chromosome 1 open reading frame 122##BC107856|C1orf122|127687|chromosome 1 open reading frame 122##BC057819|C1orf122|127687|chromosome 1 open reading frame 122##AK127381|C1orf122|127687|chromosome 1 open reading frame 122##BC102041|C1orf122|127687|chromosome 1 open reading frame 122##BC127187|C1orf122|127687|chromosome 1 open reading frame 122##BC127188|C1orf122|127687|chromosome 1 open reading frame 122##AL833055|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##BC058932|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##BC062317|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##AK310824|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##M74161|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa	0.584545	CTCF.p2:0:0.585
chr2	152855636	152855749	reg1013433.p1	9.429	+	AY054985 AK290049 NM_001005747	-25226	-	TSC_hg19_v1_chr2_-_152684998 NM_001037174 NM_012097 NM_177985	-170696	-	TSC_hg19_v1_chr2_-_152684936 AF087889 AK298937	-170746	-	AK294398 AK316045 TSC_hg19_v1_chr2_-_152955250 NM_001005746	99538	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	99855	-	TSC_hg19_v1_chr2_-_152955813 AK291378	100119	-	AY054985|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK290049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005747|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001037174|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_012097|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_177985|ARL5A|26225|ADP-ribosylation factor-like 5A##AF087889|ARL5A|26225|ADP-ribosylation factor-like 5A##AK298937|ARL5A|26225|ADP-ribosylation factor-like 5A##AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK291378|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	0.989277	CTCF.p2:0:0.989
chr2	105854546	105854622	reg1013557.p1	9.428	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	-200070	+	TSC_hg19_v1_chr2_+_105471877 NM_006236	-382686	+	TSC_hg19_v1_chr2_-_105467912 AK096498	-386668	-	BC066879 BC066880 BC067455 NM_007227 CU688176 EU883573	3673	+	TSC_hg19_v1_chr2_-_105946156 BC020548 BC010093 NM_001142621 NM_004257	91568	-	AK304268 TSC_hg19_v1_chr2_+_105953980 AK307891	99326	+	NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9##NM_006236|POU3F3|5455|POU class 3 homeobox 3##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##BC066879|GPR45|11250|G protein-coupled receptor 45##BC066880|GPR45|11250|G protein-coupled receptor 45##BC067455|GPR45|11250|G protein-coupled receptor 45##NM_007227|GPR45|11250|G protein-coupled receptor 45##EU883573|GPR45|11250|G protein-coupled receptor 45##BC020548|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_001142621|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_004257|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##AK304268|C2orf49|79074|chromosome 2 open reading frame 49##AK307891|C2orf49|79074|chromosome 2 open reading frame 49	0.998493	CTCF.p2:2:0.998
chr5	67957200	67957319	reg1013417.p1	9.428	+	AK094785 NM_001242466 AK294919	-368807	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-370713	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-372965	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	432544	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	432623	+	AK292925 TSC_hg19_v1_chr5_+_68389913	432654	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.978986	CTCF.p2:2:0.979
chr5	80404346	80404456	reg1012564.p2	9.428	+	AF023130 AF181250 TSC_hg19_v1_chr5_+_80256561	-147842	+	TSC_hg19_v1_chr5_+_80256463 BC126112 BC136296 BC143870 NM_006909	-147919	+	TSC_hg19_v1_chr5_-_79950786 BC003584 BC071996 NM_000791	-453606	-	NM_001099735 NM_001099736 NM_001825 TSC_hg19_v1_chr5_+_80529140 AK313293 BC029140 AK122769	124747	+	TSC_hg19_v1_chr5_-_80597338 AK096014	192924	-	AK092460 TSC_hg19_v1_chr5_-_80597373 AK096680	192971	-	AF023130|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF181250|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC126112|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC136296|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC143870|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_006909|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC003584|DHFR|1719|dihydrofolate reductase##BC071996|DHFR|1719|dihydrofolate reductase##NM_000791|DHFR|1719|dihydrofolate reductase##NM_001099735|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001099736|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001825|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK313293|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##BC029140|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK122769|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK096014|LOC100131067|100131067|uncharacterized LOC100131067##AK092460|LOC100131067|100131067|uncharacterized LOC100131067##AK096680|LOC100131067|100131067|uncharacterized LOC100131067	0.308352	CTCF.p2:12:0.308
chr7	65495997	65496128	reg1014412.p1	9.428	+	TSC_hg19_v1_chr7_-_65447233 NM_000181	-48796	-	TSC_hg19_v1_chr7_-_65447209 AK312752	-48844	-	TSC_hg19_v1_chr7_-_65447200 M15182 AK303819 AK223406 AK300223 AK311273	-48867	-	TSC_hg19_v1_chr7_+_65540820 NM_000048 BC008195 J03058 AK300519	44729	+	TSC_hg19_v1_chr7_+_65540823 AK310912 NM_001024943 NM_001024944 NM_001024946	44812	+	AK316334 TSC_hg19_v1_chr7_+_65540940 M14218 M57638 Y00753 BC033146	44918	+	NM_000181|GUSB|2990|glucuronidase, beta##AK312752|GUSB|2990|glucuronidase, beta##M15182|GUSB|2990|glucuronidase, beta##AK303819|GUSB|2990|glucuronidase, beta##AK223406|GUSB|2990|glucuronidase, beta##AK300223|GUSB|2990|glucuronidase, beta##AK311273|GUSB|2990|glucuronidase, beta##NM_000048|ASL|435|argininosuccinate lyase##BC008195|ASL|435|argininosuccinate lyase##J03058|ASL|435|argininosuccinate lyase##AK300519|ASL|435|argininosuccinate lyase##AK310912|ASL|435|argininosuccinate lyase##NM_001024943|ASL|435|argininosuccinate lyase##NM_001024944|ASL|435|argininosuccinate lyase##NM_001024946|ASL|435|argininosuccinate lyase##AK316334|ASL|435|argininosuccinate lyase##M14218|ASL|435|argininosuccinate lyase##M57638|ASL|435|argininosuccinate lyase##Y00753|ASL|435|argininosuccinate lyase##BC033146|ASL|435|argininosuccinate lyase	0.978529	CTCF.p2:-20:0.979
chrX	65951383	65951501	reg1012651.p2	9.428	+	AK314881 NM_001199687	-92319	-	BC034919 AK296264 AK299018 NM_021783	-92556	-	AX775690 AX775692 AF298812 AX775694 AY152724 CU689984 AB528008 AY358735 AY358736 NM_001242310	-115584	-	TSC_hg19_v1_chrX_+_66763874 NM_000044	812433	+	TSC_hg19_v1_chrX_+_66766350 M20260	814929	+	NM_001011645	837240	+	AK314881|EDA2R|60401|ectodysplasin A2 receptor##NM_001199687|EDA2R|60401|ectodysplasin A2 receptor##BC034919|EDA2R|60401|ectodysplasin A2 receptor##AK296264|EDA2R|60401|ectodysplasin A2 receptor##AK299018|EDA2R|60401|ectodysplasin A2 receptor##NM_021783|EDA2R|60401|ectodysplasin A2 receptor##AF298812|EDA2R|60401|ectodysplasin A2 receptor##AY152724|EDA2R|60401|ectodysplasin A2 receptor##AY358735|EDA2R|60401|ectodysplasin A2 receptor##AY358736|EDA2R|60401|ectodysplasin A2 receptor##NM_001242310|EDA2R|60401|ectodysplasin A2 receptor##NM_000044|AR|367|androgen receptor##M20260|AR|367|androgen receptor##NM_001011645|AR|367|androgen receptor	1.195105	CTCF.p2:11:0.938	CTCF.p2:-98:0.257
chr8	135695212	135695327	reg1012280.p1	9.427	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-1111172	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-1385772	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1491939	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	13525	-	TSC_hg19_v1_chr8_-_135725053 AB463359	29810	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	30005	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr11	90373022	90373096	reg1018459.p1	9.426	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-388649	+	AK290231 NM_001144073 NM_012124	-416528	-	CU687242 BC002339 BC072461 TSC_hg19_v1_chr11_-_89956218 AF192466 AK226099 AK225565 AK312663 AF123249 AK225365	-416857	-	NM_001008781	1712202	+	BC069163 NM_005959 U25341 AY521019	2329780	+	TSC_hg19_v1_chr11_-_92930978 CU690400	2557928	-	AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC002339|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC072461|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF192466|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK226099|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225565|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK312663|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF123249|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225365|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B	0.092384	
chr16	57754303	57754423	reg1013540.p1	9.426	+	TSC_hg19_v1_chr16_+_57728717 NM_032269 AK292558 BC030661 BC036667 AK093035 AX747872	-25634	+	AK172801 NM_170776 BC064508 AB049169 AK310124 AK301258 BC044222 AY140959	-52156	+	NM_001145774 AK297236 AK311156 TSC_hg19_v1_chr16_+_57673403 BC013207	-81046	+	TSC_hg19_v1_chr16_+_57769662 NM_005886	15282	+	TSC_hg19_v1_chr16_+_57769741 AB209250	15361	+	BC041132 AK299431 AK291737 NM_001130099	77438	-	NM_032269|CCDC135|84229|coiled-coil domain containing 135##AK292558|CCDC135|84229|coiled-coil domain containing 135##BC030661|CCDC135|84229|coiled-coil domain containing 135##BC036667|CCDC135|84229|coiled-coil domain containing 135##AK093035|CCDC135|84229|coiled-coil domain containing 135##AK172801|GPR97|222487|G protein-coupled receptor 97##NM_170776|GPR97|222487|G protein-coupled receptor 97##BC064508|GPR97|222487|G protein-coupled receptor 97##AB049169|GPR97|222487|G protein-coupled receptor 97##AK310124|GPR97|222487|G protein-coupled receptor 97##AK301258|GPR97|222487|G protein-coupled receptor 97##BC044222|GPR97|222487|G protein-coupled receptor 97##AY140959|GPR97|222487|G protein-coupled receptor 97##NM_001145774|GPR56|9289|G protein-coupled receptor 56##AK297236|GPR56|9289|G protein-coupled receptor 56##AK311156|GPR56|9289|G protein-coupled receptor 56##BC013207|GPR56|9289|G protein-coupled receptor 56##NM_005886|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1##AB209250|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1##BC041132|KIFC3|3801|kinesin family member C3##AK299431|KIFC3|3801|kinesin family member C3##AK291737|KIFC3|3801|kinesin family member C3##NM_001130099|KIFC3|3801|kinesin family member C3	0.994822	CTCF.p2:-4:0.995
chr22	16921879	16921989	reg1013818.p1	9.426	+	NM_001005239	-472131	-	BC127623 AY465171 AY465172 AY466021 NM_001136213	-634008	-	None	None	None	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	151635	-	BC137521 BC137522 BC144679 AY989815 AK098608 AY534240 BC045548 NM_175878	380635	-	AB076978 NM_001037814	567177	-	NM_001005239|OR11H1|81061|olfactory receptor, family 11, subfamily H, member 1##BC127623|POTEG|404785|POTE ankyrin domain family, member G##AY465171|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##AY466021|POTEH|23784|POTE ankyrin domain family, member H##NM_001136213|POTEH|23784|POTE ankyrin domain family, member H##BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AB076978|GAB4|128954|GRB2-associated binding protein family, member 4##NM_001037814|GAB4|128954|GRB2-associated binding protein family, member 4	0.011283	
chr8	38688322	38688451	reg1013515.p1	9.426	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	-43618	+	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	-43664	+	AY072874 AY072875 TSC_hg19_v1_chr8_+_38614814 AK308849	-73600	+	AK098787 NM_021623 TSC_hg19_v1_chr8_+_38758793 AK296068 AK291842 AF286164	70425	+	NM_153692 AK075205 BC057765 AK300197	143323	+	AL834224 BC004878 BC109050 BC109049 AF353991 AK075027 TSC_hg19_v1_chr8_-_38854016 AK225093	165626	-	AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072874|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072875|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK308849|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_153692|HTRA4|203100|HtrA serine peptidase 4##AK075205|HTRA4|203100|HtrA serine peptidase 4##BC057765|HTRA4|203100|HtrA serine peptidase 4##AK300197|HTRA4|203100|HtrA serine peptidase 4##AL834224|TM2D2|83877|TM2 domain containing 2##BC004878|TM2D2|83877|TM2 domain containing 2##BC109050|TM2D2|83877|TM2 domain containing 2##BC109049|TM2D2|83877|TM2 domain containing 2##AF353991|TM2D2|83877|TM2 domain containing 2##AK075027|TM2D2|83877|TM2 domain containing 2##AK225093|TM2D2|83877|TM2 domain containing 2	0.994087	CTCF.p2:-2:0.994
chr5	37006175	37006296	reg1013017.p1	9.425	+	TSC_hg19_v1_chr5_+_36876945 BC146821 BX640644 BC131490 AK290347 BX538178 BX538177	-129165	+	TSC_hg19_v1_chr5_+_36876875 NM_015384 NM_133433 AJ627032 AJ640137	-129371	+	TSC_hg19_v1_chr5_-_36876762 AK000901	-129472	-	AK055192 TSC_hg19_v1_chr5_-_37185009	178742	-	TSC_hg19_v1_chr5_-_37249466 NM_023073	243231	-	AB018334 NM_004298	364651	-	BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)##BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)##BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)##AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)##NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)##NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)##AK000901|LOC646719|646719|uncharacterized LOC646719##AK055192|C5orf42|65250|chromosome 5 open reading frame 42##NM_023073|C5orf42|65250|chromosome 5 open reading frame 42##AB018334|NUP155|9631|nucleoporin 155kDa##NM_004298|NUP155|9631|nucleoporin 155kDa	0.742471	CTCF.p2:3:0.742
chr4	41216716	41216822	reg1012047.p2	9.424	+	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	-200	-	BC088372 TSC_hg19_v1_chr4_-_40936716	-280091	-	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-357594	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	42127	+	TSC_hg19_v1_chr4_+_41258913 BC000332 BC018838	42149	+	TSC_hg19_v1_chr4_+_41258944 AK054579 AK315368 BC006305 BC005117 DQ891998 DQ895188 AB590113 AB209038 X04741	42206	+	BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##AK054579|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##AK315368|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC006305|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC005117|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##DQ891998|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##DQ895188|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##AB209038|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##X04741|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.751306	CTCF.p2:-12:0.592
chr1	111575039	111575187	reg1015962.p1	9.423	+	TSC_hg19_v1_chr1_-_111506545 AY190122 NM_001006945 NM_018372 CR933637	-68562	-	BC040693 TSC_hg19_v1_chr1_+_111415791 M37033 M60871	-159311	+	NM_000560 TSC_hg19_v1_chr1_+_111415769 AK313582 AK298723	-159358	+	BC049196 NM_001007794 AL833102 TSC_hg19_v1_chr1_+_111682370	107196	+	AL833098 TSC_hg19_v1_chr1_-_111682678 AY358492	107571	-	TSC_hg19_v1_chr1_-_111682718 AY336747 BC091509	107618	-	AY190122|LRIF1|55791|ligand dependent nuclear receptor interacting factor 1##NM_001006945|LRIF1|55791|ligand dependent nuclear receptor interacting factor 1##NM_018372|LRIF1|55791|ligand dependent nuclear receptor interacting factor 1##BC040693|CD53|963|CD53 molecule##M37033|CD53|963|CD53 molecule##M60871|CD53|963|CD53 molecule##NM_000560|CD53|963|CD53 molecule##AK313582|CD53|963|CD53 molecule##AK298723|CD53|963|CD53 molecule##BC049196|CEPT1|10390|choline/ethanolamine phosphotransferase 1##NM_001007794|CEPT1|10390|choline/ethanolamine phosphotransferase 1##AL833102|CEPT1|10390|choline/ethanolamine phosphotransferase 1##AL833098|DRAM2|128338|DNA-damage regulated autophagy modulator 2##AY358492|DRAM2|128338|DNA-damage regulated autophagy modulator 2##AY336747|DRAM2|128338|DNA-damage regulated autophagy modulator 2##BC091509|DRAM2|128338|DNA-damage regulated autophagy modulator 2	0.890569	CTCF.p2:-8:0.891
chr1	154321035	154321143	reg1013251.p1	9.423	+	TSC_hg19_v1_chr1_+_154301249 AK054886	-19833	+	AY302537 NM_020452	-20814	+	TSC_hg19_v1_chr1_+_154298034 NM_001005855 X58235	-23026	+	NM_000565 NM_001206866 NM_181359 X12830 BC089410 TSC_hg19_v1_chr1_+_154377822	56661	+	AK223582 BC132684 BC132686 TSC_hg19_v1_chr1_+_154377856	56763	+	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	56985	+	AK054886|ATP8B2|57198|ATPase, class I, type 8B, member 2##AY302537|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_020452|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_001005855|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_000565|IL6R|3570|interleukin 6 receptor##NM_001206866|IL6R|3570|interleukin 6 receptor##NM_181359|IL6R|3570|interleukin 6 receptor##X12830|IL6R|3570|interleukin 6 receptor##BC089410|IL6R|3570|interleukin 6 receptor##AK223582|IL6R|3570|interleukin 6 receptor##BC132684|IL6R|3570|interleukin 6 receptor##BC132686|IL6R|3570|interleukin 6 receptor##AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor	0.078659	
chr18	20991876	20991993	reg1012545.p2	9.423	+	BC037218 NM_138375	-256146	+	EF028204 NM_001100619	-276208	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-478119	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	25937	-	AK057292 NM_003831	40852	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	41312	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.910274	CTCF.p2:20:0.910
chr5	131926979	131927108	reg1012519.p2	9.423	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-34403	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	-47851	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	-100562	-	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	66847	+	NM_000589 NM_172348	82329	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	146174	-	NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A	0.711623	CTCF.p2:-8:0.712
chr9	74383925	74384040	reg1013371.p2	9.423	+	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	-404	-	AL136545 TSC_hg19_v1_chr9_-_74061901	-322099	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	-647446	-	AF151825 TSC_hg19_v1_chr9_-_74525994	141943	-	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	142174	-	TSC_hg19_v1_chr9_+_74526393 NM_182505 BC010179	142419	+	BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2##AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF151825|FAM108B1|51104|family with sequence similarity 108, member B1##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1##NM_182505|C9orf85|138241|chromosome 9 open reading frame 85##BC010179|C9orf85|138241|chromosome 9 open reading frame 85	0.0	
chr3	178822991	178823128	reg1014545.p1	9.422	+	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	-33433	-	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	-33494	-	AF209747 NM_005832	-546507	+	TSC_hg19_v1_chr3_+_178866144 NM_006218 AK292940	43179	+	AF160968 NM_014407 BC113851	146350	-	NM_171830	146585	-	NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AF160968|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_014407|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##BC113851|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_171830|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3	0.931436	CTCF.p2:-6:0.931
chr3	19927008	19927135	reg1015855.p1	9.422	+	AK295633 AY053503 NM_144633 AB209053 AK309034	-737067	+	BC001744 NM_001131010	-1446838	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	-1460274	-	BC028198 AK097644 NM_144715	48617	-	TSC_hg19_v1_chr3_+_19988586 NM_004162	61618	+	TSC_hg19_v1_chr3_+_19988870 AK312618 BC018288 AK309287 AK295992 BC001267	61830	+	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC028198|EFHB|151651|EF-hand domain family, member B##AK097644|EFHB|151651|EF-hand domain family, member B##NM_144715|EFHB|151651|EF-hand domain family, member B##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family##AK312618|RAB5A|5868|RAB5A, member RAS oncogene family##BC018288|RAB5A|5868|RAB5A, member RAS oncogene family##AK309287|RAB5A|5868|RAB5A, member RAS oncogene family##AK295992|RAB5A|5868|RAB5A, member RAS oncogene family##BC001267|RAB5A|5868|RAB5A, member RAS oncogene family	0.375465	CTCF.p2:-2:0.375
chr16	4409189	4409329	reg1014896.p1	9.421	+	TSC_hg19_v1_chr16_-_4401268 AF151894 AF349455 BC005024 AK026514 NM_016069	-7941	-	AK095566 TSC_hg19_v1_chr16_+_4385160	-24108	+	AF325914 NM_032575 AB463687	-27008	+	TSC_hg19_v1_chr16_+_4421848 BC068575 NM_138440 AY358298 AY358299	12641	+	AY166584 CU686679 TSC_hg19_v1_chr16_+_4431007 BC013767	21727	+	TSC_hg19_v1_chr16_-_4465899 AK094596	56628	-	AF151894|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AF349455|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##BC005024|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AK026514|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##NM_016069|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AK095566|GLIS2|84662|GLIS family zinc finger 2##AF325914|GLIS2|84662|GLIS family zinc finger 2##NM_032575|GLIS2|84662|GLIS family zinc finger 2##BC068575|VASN|114990|vasorin##NM_138440|VASN|114990|vasorin##AY358298|VASN|114990|vasorin##AY358299|VASN|114990|vasorin##AY166584|VASN|114990|vasorin##BC013767|VASN|114990|vasorin##AK094596|CORO7|79585|coronin 7	0.999681	CTCF.p2:-16:1.000
chr18	47794919	47795066	reg1012976.p2	9.421	+	AB527886 BC030606 NM_145020 AK302114	-2160	-	AB384567 AB032945 TSC_hg19_v1_chr18_-_47721518 AB290160 BC032511 NM_001080467	-73620	-	TSC_hg19_v1_chr18_-_47376221 BC033527	-418803	-	AF078830 AF078831 AF078832 AF078833 EF488685 AB527669 NM_001204151	11381	-	AK295401 TSC_hg19_v1_chr18_-_47807854 BC012487 BC047353 AK302004 AJ564845 Y10746 AK225948	12777	-	BC033242 TSC_hg19_v1_chr18_-_47807877	12887	-	BC030606|CCDC11|220136|coiled-coil domain containing 11##NM_145020|CCDC11|220136|coiled-coil domain containing 11##AK302114|CCDC11|220136|coiled-coil domain containing 11##AB032945|MYO5B|4645|myosin VB##AB290160|MYO5B|4645|myosin VB##BC032511|MYO5B|4645|myosin VB##NM_001080467|MYO5B|4645|myosin VB##BC033527|MYO5B|4645|myosin VB##AF078830|MBD1|4152|methyl-CpG binding domain protein 1##AF078831|MBD1|4152|methyl-CpG binding domain protein 1##AF078832|MBD1|4152|methyl-CpG binding domain protein 1##AF078833|MBD1|4152|methyl-CpG binding domain protein 1##EF488685|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204151|MBD1|4152|methyl-CpG binding domain protein 1##AK295401|MBD1|4152|methyl-CpG binding domain protein 1##BC047353|MBD1|4152|methyl-CpG binding domain protein 1##AK302004|MBD1|4152|methyl-CpG binding domain protein 1##AJ564845|MBD1|4152|methyl-CpG binding domain protein 1##Y10746|MBD1|4152|methyl-CpG binding domain protein 1##AK225948|MBD1|4152|methyl-CpG binding domain protein 1##BC033242|MBD1|4152|methyl-CpG binding domain protein 1	0.986448	CTCF.p2:0:0.986
chrX	107942698	107942847	reg1015256.p1	9.421	+	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	-259688	+	BT007228 L22763 U04845 NM_001847 BC005305	-260109	-	BC140855 BC144669 BC000874 BC070203 NM_033641 D21337	-261165	-	NM_003604 AF007567	36850	-	NM_001522 L37378	782513	-	AK023289 NM_018698 BC120984 BC120985	836242	+	BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##BC140855|COL4A6|1288|collagen, type IV, alpha 6##BC144669|COL4A6|1288|collagen, type IV, alpha 6##BC000874|COL4A6|1288|collagen, type IV, alpha 6##BC070203|COL4A6|1288|collagen, type IV, alpha 6##NM_033641|COL4A6|1288|collagen, type IV, alpha 6##D21337|COL4A6|1288|collagen, type IV, alpha 6##NM_003604|IRS4|8471|insulin receptor substrate 4##AF007567|IRS4|8471|insulin receptor substrate 4##NM_001522|GUCY2F|2986|guanylate cyclase 2F, retinal##L37378|GUCY2F|2986|guanylate cyclase 2F, retinal##AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2	0.984386	CTCF.p2:0:0.984
chr11	26298500	26298611	reg1013021.p2	9.420	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-1779906	+	NM_001195637	-3416584	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-3447210	-	NM_031418 AK302659	55175	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	295185	-	BC049207 NM_178498	445004	-	AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	0.972236	CTCF.p2:12:0.972
chr18	48577631	48577729	reg1010275.p2	9.420	+	TSC_hg19_v1_chr18_+_48556613 AK290770 BC002379	-21074	+	TSC_hg19_v1_chr18_+_48556582 NM_005359	-21146	+	TSC_hg19_v1_chr18_+_48494409 AK024822 AF308695 AK303027 AK310911 BC014624 AK223507 AB029151	-83259	+	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	145546	-	AY950679 TSC_hg19_v1_chr18_-_48723734	146032	-	TSC_hg19_v1_chr18_-_48724033 NM_016626	146360	-	AK290770|SMAD4|4089|SMAD family member 4##BC002379|SMAD4|4089|SMAD family member 4##NM_005359|SMAD4|4089|SMAD family member 4##AK024822|ELAC1|55520|elaC homolog 1 (E. coli)##AF308695|ELAC1|55520|elaC homolog 1 (E. coli)##AK310911|ELAC1|55520|elaC homolog 1 (E. coli)##BC014624|ELAC1|55520|elaC homolog 1 (E. coli)##AK223507|ELAC1|55520|elaC homolog 1 (E. coli)##AB029151|ELAC1|55520|elaC homolog 1 (E. coli)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)	0.69064	CTCF.p2:-2:0.691
chr19	45949601	45949747	reg1012681.p1	9.420	+	TSC_hg19_v1_chr19_-_45927176 NM_001166049 NM_001983	-22499	-	TSC_hg19_v1_chr19_-_45927167 AF433652 AF001925 M13194 M28650	-22517	-	TSC_hg19_v1_chr19_-_45927109 BC008930 AB069681 AK314884	-22564	-	TSC_hg19_v1_chr19_+_45971253 EU178109 EU178110 EU178111 EU178112 EU178113 EU178114 EU178115 EU178116 L49169 NM_001114171 NM_006732 AK097324 AK225070 BC051767 BC036724 BC063042	21595	+	AF004224 TSC_hg19_v1_chr19_-_45996506 NM_206901	46819	-	TSC_hg19_v1_chr19_-_46000271 AF004222 BC014244 BC073874 AK291967 NM_005619 NM_206900	50573	-	NM_001166049|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##NM_001983|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AF433652|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AF001925|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##M13194|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##M28650|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##BC008930|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AB069681|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AK314884|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##EU178109|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178110|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178111|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178112|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178113|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178114|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178115|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178116|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##L49169|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_001114171|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_006732|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##AK225070|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##BC036724|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##BC063042|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##AF004224|RTN2|6253|reticulon 2##NM_206901|RTN2|6253|reticulon 2##AF004222|RTN2|6253|reticulon 2##BC014244|RTN2|6253|reticulon 2##BC073874|RTN2|6253|reticulon 2##AK291967|RTN2|6253|reticulon 2##NM_005619|RTN2|6253|reticulon 2##NM_206900|RTN2|6253|reticulon 2	0.969275	CTCF.p2:-6:0.969
chr4	75601019	75601129	reg1013676.p1	9.420	+	BC009799 M30704 NM_001657	-120446	+	BC009799 M30704 NM_001657	-290222	+	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	-370134	+	BC011618 S55606 AB109441 NM_001729	118709	-	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	257298	+	TSC_hg19_v1_chr4_-_76439504 AK309555 AK308754 AB528599 AF247041 CU689096 CU690404 GQ129342 GQ129343 GQ250944 GQ250945 GQ250946 JF691538 JF691539 AB209072 AF255666 AY888047 GU937000 AF305424	838442	-	BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK309555|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK308754|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF247041|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129342|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129343|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250944|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250945|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250946|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AB209072|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF255666|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AY888047|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GU937000|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF305424|RCHY1|25898|ring finger and CHY zinc finger domain containing 1	0.972271	CTCF.p2:7:0.972
chr4	176955806	176955916	reg1013577.p2	9.419	+	TSC_hg19_v1_chr4_-_176923575 NM_005277 NM_201592	-32252	-	AK226176 TSC_hg19_v1_chr4_-_176923545	-32321	-	BC022528 TSC_hg19_v1_chr4_-_176923504	-32367	-	BC146812 NM_170710 NM_181265 AF492460 TSC_hg19_v1_chr4_+_176987137	31200	+	TSC_hg19_v1_chr4_+_176987148 BC118549 BC118627 AK098748 DQ426895 DQ426896	31308	+	CU692400 TSC_hg19_v1_chr4_-_177116722 BC021731 BC029428 AY040204 NM_144644	160906	-	NM_005277|GPM6A|2823|glycoprotein M6A##NM_201592|GPM6A|2823|glycoprotein M6A##AK226176|GPM6A|2823|glycoprotein M6A##BC022528|GPM6A|2823|glycoprotein M6A##BC146812|WDR17|116966|WD repeat domain 17##NM_170710|WDR17|116966|WD repeat domain 17##NM_181265|WDR17|116966|WD repeat domain 17##AF492460|WDR17|116966|WD repeat domain 17##BC118549|WDR17|116966|WD repeat domain 17##BC118627|WDR17|116966|WD repeat domain 17##AK098748|WDR17|116966|WD repeat domain 17##DQ426895|WDR17|116966|WD repeat domain 17##DQ426896|WDR17|116966|WD repeat domain 17##BC021731|SPATA4|132851|spermatogenesis associated 4##BC029428|SPATA4|132851|spermatogenesis associated 4##AY040204|SPATA4|132851|spermatogenesis associated 4##NM_144644|SPATA4|132851|spermatogenesis associated 4	0.959142	CTCF.p2:-19:0.959
chr6	125474798	125474913	reg1013253.p1	9.419	+	AK093417 AX748113 BC026087 NM_152553	-170344	+	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	-1349651	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	-1516766	-	TSC_hg19_v1_chr6_+_125474909 NM_001003396 NM_001003397 NM_003287 AK291866 U44427 BC002375 AK291872 AF208012 AK291887	84	+	AK124817 NM_001003395	521	+	TSC_hg19_v1_chr6_-_125623123 AF529363 BC066332 BC061520 BC003357 AF151888	148250	-	AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217##NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##NM_001003396|TPD52L1|7164|tumor protein D52-like 1##NM_001003397|TPD52L1|7164|tumor protein D52-like 1##NM_003287|TPD52L1|7164|tumor protein D52-like 1##AK291866|TPD52L1|7164|tumor protein D52-like 1##U44427|TPD52L1|7164|tumor protein D52-like 1##BC002375|TPD52L1|7164|tumor protein D52-like 1##AK291872|TPD52L1|7164|tumor protein D52-like 1##AF208012|TPD52L1|7164|tumor protein D52-like 1##AK291887|TPD52L1|7164|tumor protein D52-like 1##AK124817|TPD52L1|7164|tumor protein D52-like 1##NM_001003395|TPD52L1|7164|tumor protein D52-like 1##AF529363|HDDC2|51020|HD domain containing 2##BC066332|HDDC2|51020|HD domain containing 2##BC061520|HDDC2|51020|HD domain containing 2##BC003357|HDDC2|51020|HD domain containing 2##AF151888|HDDC2|51020|HD domain containing 2	1.006802	CTCF.p2:-6:0.974
chrX	56790975	56791106	reg1008883.p3	9.419	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-35349	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-200989	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-532130	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	230931	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	356888	-	BC071694 NM_019003	373017	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.990522	CTCF.p2:-2:0.991
chr3	61356955	61357058	reg1010589.p2	9.418	+	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	-119916	-	BC050317 TSC_hg19_v1_chr3_-_59035759	-2321246	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-2321265	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	190205	+	BC047734 TSC_hg19_v1_chr3_+_61547294	190280	+	L09247 AB385117 TSC_hg19_v1_chr3_+_61548071	190970	+	BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.903952	CTCF.p2:-7:0.904
chr5	94574783	94574910	reg1013006.p1	9.418	+	NM_001002796	-157302	-	AY656716 AK058012 BC030005 AK057694 TSC_hg19_v1_chr5_-_94417350	-157578	-	AK025997 TSC_hg19_v1_chr5_-_94224607	-350240	-	TSC_hg19_v1_chr5_-_94620306 AY656715 NM_024717	45447	-	BC034772 NM_152548 AK058062	152209	+	TSC_hg19_v1_chr5_-_94890682 BC009767 AK307531 BC030966 BC056893 AB002370 NM_014639	315841	-	NM_001002796|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1##AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1##BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1##AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1##AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656715|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_024717|MCTP1|79772|multiple C2 domains, transmembrane 1##BC034772|FAM81B|153643|family with sequence similarity 81, member B##NM_152548|FAM81B|153643|family with sequence similarity 81, member B##AK058062|FAM81B|153643|family with sequence similarity 81, member B##BC009767|TTC37|9652|tetratricopeptide repeat domain 37##AK307531|TTC37|9652|tetratricopeptide repeat domain 37##BC030966|TTC37|9652|tetratricopeptide repeat domain 37##BC056893|TTC37|9652|tetratricopeptide repeat domain 37##AB002370|TTC37|9652|tetratricopeptide repeat domain 37##NM_014639|TTC37|9652|tetratricopeptide repeat domain 37	0.448045	CTCF.p2:10:0.448
chr6	39329915	39330005	reg1013223.p1	9.418	+	AF358909 AY253145 AY253146 AY253147 BC111860 NM_001135105 NM_001135106 NM_001135107 NM_032115 EU978943	-39621	-	AF358910 CU693040 DQ891712 DQ894889 EU978944 BC025726 AY358853 AF339912 AK310582 AK315273 NM_031460 NM_001135111	-47795	-	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	-132720	-	BC117307 BC143444 BC143445 AK131471 NM_145027	363185	-	TSC_hg19_v1_chr6_+_39760140 AK091749 AX747160	430179	+	TSC_hg19_v1_chr6_+_39760151 AK310941 AB002379 NM_001201427 BC047575	430202	+	AF358909|KCNK16|83795|potassium channel, subfamily K, member 16##AY253145|KCNK16|83795|potassium channel, subfamily K, member 16##AY253146|KCNK16|83795|potassium channel, subfamily K, member 16##AY253147|KCNK16|83795|potassium channel, subfamily K, member 16##BC111860|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135105|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135106|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135107|KCNK16|83795|potassium channel, subfamily K, member 16##NM_032115|KCNK16|83795|potassium channel, subfamily K, member 16##EU978943|KCNK16|83795|potassium channel, subfamily K, member 16##AF358910|KCNK17|89822|potassium channel, subfamily K, member 17##DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17##DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17##EU978944|KCNK17|89822|potassium channel, subfamily K, member 17##BC025726|KCNK17|89822|potassium channel, subfamily K, member 17##AY358853|KCNK17|89822|potassium channel, subfamily K, member 17##AF339912|KCNK17|89822|potassium channel, subfamily K, member 17##AK310582|KCNK17|89822|potassium channel, subfamily K, member 17##AK315273|KCNK17|89822|potassium channel, subfamily K, member 17##NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17##NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17##AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5##BC117307|KIF6|221458|kinesin family member 6##BC143444|KIF6|221458|kinesin family member 6##BC143445|KIF6|221458|kinesin family member 6##AK131471|KIF6|221458|kinesin family member 6##NM_145027|KIF6|221458|kinesin family member 6##AK310941|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AB002379|DAAM2|23500|dishevelled associated activator of morphogenesis 2##NM_001201427|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC047575|DAAM2|23500|dishevelled associated activator of morphogenesis 2	0.41961	CTCF.p2:0:0.420
chr20	35824095	35824204	reg1009092.p2	9.417	+	AB527120 AM392522 AM392819 TSC_hg19_v1_chr20_-_35807952 BC030006 BC057767 NM_152503 NM_213631 NM_213632 AK093432 AX748122	-16212	-	TSC_hg19_v1_chr20_+_35807749 AK308683 CR456899 DQ892347 DQ895552	-16396	+	TSC_hg19_v1_chr20_+_35807732 AK315801 BC003560	-16434	+	X00094 BC098109 BC098161 BC099727 NM_001184731 NM_021081	61138	-	TSC_hg19_v1_chr20_+_35918057 AK292971 NM_001003897 NM_022077	93886	+	TSC_hg19_v1_chr20_+_35918065 BC016822 BC014672	93936	+	AM392522|C20orf132|140699|chromosome 20 open reading frame 132##AM392819|C20orf132|140699|chromosome 20 open reading frame 132##BC030006|C20orf132|140699|chromosome 20 open reading frame 132##BC057767|C20orf132|140699|chromosome 20 open reading frame 132##NM_152503|C20orf132|140699|chromosome 20 open reading frame 132##NM_213631|C20orf132|140699|chromosome 20 open reading frame 132##NM_213632|C20orf132|140699|chromosome 20 open reading frame 132##AK093432|C20orf132|140699|chromosome 20 open reading frame 132##AK308683|RPN2|6185|ribophorin II##CR456899|RPN2|6185|ribophorin II##DQ892347|RPN2|6185|ribophorin II##DQ895552|RPN2|6185|ribophorin II##AK315801|RPN2|6185|ribophorin II##BC003560|RPN2|6185|ribophorin II##X00094|GHRH|2691|growth hormone releasing hormone##BC098109|GHRH|2691|growth hormone releasing hormone##BC098161|GHRH|2691|growth hormone releasing hormone##BC099727|GHRH|2691|growth hormone releasing hormone##NM_001184731|GHRH|2691|growth hormone releasing hormone##NM_021081|GHRH|2691|growth hormone releasing hormone##AK292971|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_001003897|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_022077|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC016822|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC014672|MANBAL|63905|mannosidase, beta A, lysosomal-like	0.289122	CTCF.p2:-15:0.289
chr10	52181141	52181274	reg1013977.p1	9.415	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-172867	-	NM_018232	-343322	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-353485	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	202496	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	318503	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	464186	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.468091	CTCF.p2:1:0.468
chr13	70111756	70111861	reg1012772.p1	9.415	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-2307304	-	AK289924 NM_022843	-8122154	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-8122555	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	570733	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	2328451	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	2328955	-	BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)	0.984786	CTCF.p2:-15:0.985
chr11	63768010	63768101	reg1012314.p1	9.414	+	TSC_hg19_v1_chr11_+_63754327 AK307413	-13742	+	BC010368 BC107701 TSC_hg19_v1_chr11_+_63753917 AK303228 AF161381 AK225133 AL096714 AK091830 BC007519 AY177200 CU675687 CU679683	-14135	+	TSC_hg19_v1_chr11_+_63753896 AK000120	-14194	+	AY358308 BC018370 NM_013280	103245	+	AF086206 BC003188 TSC_hg19_v1_chr11_-_63933439	165266	-	TSC_hg19_v1_chr11_-_63933585 AF202922 BC000270 BC007297 BC008316 NM_014067	165500	-	AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AY358308|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##BC018370|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##NM_013280|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##AF086206|MACROD1|28992|MACRO domain containing 1##BC003188|MACROD1|28992|MACRO domain containing 1##AF202922|MACROD1|28992|MACRO domain containing 1##BC000270|MACROD1|28992|MACRO domain containing 1##BC007297|MACROD1|28992|MACRO domain containing 1##BC008316|MACROD1|28992|MACRO domain containing 1##NM_014067|MACROD1|28992|MACRO domain containing 1	0.964467	CTCF.p2:2:0.964
chrX	130950872	130951031	reg1011594.p1	9.414	+	BC137050 AB529233 NM_001004486	-272953	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-527539	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-527689	-	TSC_hg19_v1_chrX_-_130964633 AK097911	13700	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	206370	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	206689	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.09164	
chr1	209422134	209422252	reg1014613.p1	9.413	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-1004544	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-1337636	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-1337810	-	AK091113 AX746785 NM_001104548	179972	+	NM_020439 AK095713 AK289675 AF428261 BC032787	334867	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	402486	-	NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3	0.999498	CTCF.p2:9:0.999
chr2	106865152	106865268	reg1014808.p1	9.413	+	TSC_hg19_v1_chr2_-_106810781 NM_025076	-54405	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	-54452	-	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	-54465	-	NM_001144013	219590	-	FJ433885 TSC_hg19_v1_chr2_-_107502508	637275	-	AB058780 NM_001142351 TSC_hg19_v1_chr2_-_107502624	637409	-	NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##NM_001144013|RGPD3|653489|RANBP2-like and GRIP domain containing 3##AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	0.986111	CTCF.p2:0:0.986
chr4	151219155	151219257	reg1011035.p1	9.413	+	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	-219681	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-1855622	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-1855867	-	NM_006439	283870	+	TSC_hg19_v1_chr4_-_151770612 AB208838	551443	-	TSC_hg19_v1_chr4_-_151773972 BC172218	554788	-	AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.967296	CTCF.p2:5:0.967
chr4	54671048	54671164	reg1014235.p1	9.413	+	AK056823 NM_001126328 TSC_hg19_v1_chr4_-_54457761	-213362	-	BC022983 TSC_hg19_v1_chr4_-_54457654	-213463	-	TSC_hg19_v1_chr4_-_54424402 NM_032622	-246688	-	AB463552 DQ890711 DQ893893 TSC_hg19_v1_chr4_-_54930576	259420	-	TSC_hg19_v1_chr4_-_54930764 AF159423 BC034691	259629	-	TSC_hg19_v1_chr4_-_54930773 AK312427 NM_012110	259691	-	AK056823|LNX1|84708|ligand of numb-protein X 1##NM_001126328|LNX1|84708|ligand of numb-protein X 1##BC022983|LNX1|84708|ligand of numb-protein X 1##NM_032622|LNX1|84708|ligand of numb-protein X 1##DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2##DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2##AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2##BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2##AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	0.996503	CTCF.p2:7:0.997
chr12	86261062	86261200	reg1012877.p1	9.411	+	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	-30894	-	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	-31086	-	U31986 TSC_hg19_v1_chr12_+_85673999 BC010923 NM_006982	-587172	+	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	6995	+	BC035851 NM_013244	971526	-	AL833338 BC062424 AK093140 AX747948 NM_152589	2162029	-	AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##U31986|ALX1|8092|ALX homeobox 1##BC010923|ALX1|8092|ALX homeobox 1##NM_006982|ALX1|8092|ALX homeobox 1##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin##BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##AL833338|C12orf50|160419|chromosome 12 open reading frame 50##BC062424|C12orf50|160419|chromosome 12 open reading frame 50##AK093140|C12orf50|160419|chromosome 12 open reading frame 50##NM_152589|C12orf50|160419|chromosome 12 open reading frame 50	0.938229	CTCF.p2:15:0.938
chr11	46391116	46391251	reg1015807.p1	9.410	+	TSC_hg19_v1_chr11_+_46383155 NM_001105540 U94905	-8048	+	TSC_hg19_v1_chr11_+_46369117 NM_001199266 NM_001199267 NM_001199268 NM_003646 AK225774 U51477 BC041770 AK293615 AK294888 AK312398	-22159	+	TSC_hg19_v1_chr11_+_46367020 AK300577	-24147	+	AK309963 AK308210 TSC_hg19_v1_chr11_+_46402507 AK130889 NM_001012334	11292	+	TSC_hg19_v1_chr11_+_46403232 DQ323888 DQ323889 DQ323890 NM_002391	12037	+	TSC_hg19_v1_chr11_+_46403264 BC011704	12083	+	NM_001105540|DGKZ|8525|diacylglycerol kinase, zeta##U94905|DGKZ|8525|diacylglycerol kinase, zeta##NM_001199266|DGKZ|8525|diacylglycerol kinase, zeta##NM_001199267|DGKZ|8525|diacylglycerol kinase, zeta##NM_001199268|DGKZ|8525|diacylglycerol kinase, zeta##NM_003646|DGKZ|8525|diacylglycerol kinase, zeta##AK225774|DGKZ|8525|diacylglycerol kinase, zeta##U51477|DGKZ|8525|diacylglycerol kinase, zeta##BC041770|DGKZ|8525|diacylglycerol kinase, zeta##AK293615|DGKZ|8525|diacylglycerol kinase, zeta##AK294888|DGKZ|8525|diacylglycerol kinase, zeta##AK312398|DGKZ|8525|diacylglycerol kinase, zeta##AK300577|DGKZ|8525|diacylglycerol kinase, zeta##AK309963|MDK|4192|midkine (neurite growth-promoting factor 2)##AK308210|MDK|4192|midkine (neurite growth-promoting factor 2)##AK130889|MDK|4192|midkine (neurite growth-promoting factor 2)##NM_001012334|MDK|4192|midkine (neurite growth-promoting factor 2)##DQ323888|MDK|4192|midkine (neurite growth-promoting factor 2)##DQ323889|MDK|4192|midkine (neurite growth-promoting factor 2)##DQ323890|MDK|4192|midkine (neurite growth-promoting factor 2)##NM_002391|MDK|4192|midkine (neurite growth-promoting factor 2)##BC011704|MDK|4192|midkine (neurite growth-promoting factor 2)	0.852423	CTCF.p2:0:0.852
chr12	127268996	127269133	reg1012612.p2	9.410	+	NM_052907	-1457903	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-1718996	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-1719123	+	NM_001136103	1482883	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	2039379	-	BC043528 TSC_hg19_v1_chr12_+_129337985	2068920	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	1.058826	CTCF.p2:-1:0.983
chr19	2069804	2069944	reg1013871.p6	9.410	+	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-18641	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-23633	-	TSC_hg19_v1_chr19_-_2042036 AK001730	-27824	-	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	15369	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	26391	-	TSC_hg19_v1_chr19_-_2096297 AL832474	26420	-	BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK001730|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A	0.946771	CTCF.p2:6:0.947
chr11	64885351	64885486	reg1015384.p1	9.409	+	AK223333 BC041076 AK027081 BC057799 BC029825 BC038089 AF119497 NM_014205 BC052240 AK223358	-267	-	TSC_hg19_v1_chr11_+_64879343 NM_003273 AK290935 AK296441 BC038353 BC009052 AF096304 AF023676 BC012857 CU679239 CU680420	-6028	+	BC010872 TSC_hg19_v1_chr11_+_64863712 BC007198 BC017438	-21704	+	TSC_hg19_v1_chr11_-_64889607 BC051834 BC033877 D28403 X65923 AK026639 NM_001997	4208	-	TSC_hg19_v1_chr11_+_64889792 NM_004927 AK129986 AK311821 AK129795	4332	+	TSC_hg19_v1_chr11_+_64889802 U39400 BC004378 AB062395	4390	+	AK223333|ZNHIT2|741|zinc finger, HIT-type containing 2##AK027081|ZNHIT2|741|zinc finger, HIT-type containing 2##BC057799|ZNHIT2|741|zinc finger, HIT-type containing 2##BC029825|ZNHIT2|741|zinc finger, HIT-type containing 2##BC038089|ZNHIT2|741|zinc finger, HIT-type containing 2##AF119497|ZNHIT2|741|zinc finger, HIT-type containing 2##NM_014205|ZNHIT2|741|zinc finger, HIT-type containing 2##BC052240|ZNHIT2|741|zinc finger, HIT-type containing 2##AK223358|ZNHIT2|741|zinc finger, HIT-type containing 2##NM_003273|TM7SF2|7108|transmembrane 7 superfamily member 2##AK290935|TM7SF2|7108|transmembrane 7 superfamily member 2##AK296441|TM7SF2|7108|transmembrane 7 superfamily member 2##BC038353|TM7SF2|7108|transmembrane 7 superfamily member 2##BC009052|TM7SF2|7108|transmembrane 7 superfamily member 2##AF096304|TM7SF2|7108|transmembrane 7 superfamily member 2##AF023676|TM7SF2|7108|transmembrane 7 superfamily member 2##BC012857|TM7SF2|7108|transmembrane 7 superfamily member 2##BC010872|C11orf2|738|chromosome 11 open reading frame 2##BC007198|C11orf2|738|chromosome 11 open reading frame 2##BC017438|C11orf2|738|chromosome 11 open reading frame 2##BC051834|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##BC033877|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##D28403|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##X65923|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##AK026639|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##NM_001997|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##NM_004927|MRPL49|740|mitochondrial ribosomal protein L49##AK129986|MRPL49|740|mitochondrial ribosomal protein L49##AK311821|MRPL49|740|mitochondrial ribosomal protein L49##AK129795|MRPL49|740|mitochondrial ribosomal protein L49##U39400|MRPL49|740|mitochondrial ribosomal protein L49##BC004378|MRPL49|740|mitochondrial ribosomal protein L49##AB062395|MRPL49|740|mitochondrial ribosomal protein L49	0.971192	CTCF.p2:4:0.971
chr2	61922137	61922295	reg1013317.p2	9.409	+	TSC_hg19_v1_chr2_-_61765394 BX647758 NM_003400	-156811	-	TSC_hg19_v1_chr2_-_61765383 BC032847 CR749840	-156837	-	TSC_hg19_v1_chr2_-_61765358 AL833550	-156861	-	BC107162 BC107163 AK310908 AB527366 AM392542 AM392832 AM393518 TSC_hg19_v1_chr2_-_62081180 BX648834 BX649029 AK023367 BC036448 NM_001201543 NM_032180	158947	-	U38846 EU446763 AB385091 TSC_hg19_v1_chr2_-_62115685 AK294665	193448	-	AK129860 TSC_hg19_v1_chr2_-_62115719 AK295330	193502	-	BX647758|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##NM_003400|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC032847|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##CR749840|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##AL833550|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC107162|FAM161A|84140|family with sequence similarity 161, member A##BC107163|FAM161A|84140|family with sequence similarity 161, member A##AK310908|FAM161A|84140|family with sequence similarity 161, member A##AM392542|FAM161A|84140|family with sequence similarity 161, member A##AM392832|FAM161A|84140|family with sequence similarity 161, member A##AM393518|FAM161A|84140|family with sequence similarity 161, member A##BX648834|FAM161A|84140|family with sequence similarity 161, member A##BX649029|FAM161A|84140|family with sequence similarity 161, member A##AK023367|FAM161A|84140|family with sequence similarity 161, member A##BC036448|FAM161A|84140|family with sequence similarity 161, member A##NM_001201543|FAM161A|84140|family with sequence similarity 161, member A##NM_032180|FAM161A|84140|family with sequence similarity 161, member A##U38846|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##EU446763|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK294665|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK129860|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK295330|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)	0.053629	
chr12	67555246	67555354	reg1014889.p1	9.408	+	TSC_hg19_v1_chr12_-_67072881 AK095519 NM_001178074 NM_021150	-482398	-	BC115393 BC115394 TSC_hg19_v1_chr12_-_67072757 AK307576	-482544	-	TSC_hg19_v1_chr12_+_66696305 NM_033647 BC143409 BC143411 AK290894 AK024464 AB527324 AF319995	-858971	+	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	107802	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	107872	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	108130	+	AK095519|GRIP1|23426|glutamate receptor interacting protein 1##NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1##NM_021150|GRIP1|23426|glutamate receptor interacting protein 1##BC115393|GRIP1|23426|glutamate receptor interacting protein 1##BC115394|GRIP1|23426|glutamate receptor interacting protein 1##AK307576|GRIP1|23426|glutamate receptor interacting protein 1##NM_033647|HELB|92797|helicase (DNA) B##BC143409|HELB|92797|helicase (DNA) B##BC143411|HELB|92797|helicase (DNA) B##AK290894|HELB|92797|helicase (DNA) B##AF319995|HELB|92797|helicase (DNA) B##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1	0.998864	CTCF.p2:4:0.999
chr14	58633238	58633345	reg1012814.p1	9.408	+	TSC_hg19_v1_chr14_-_58618916 AK292513	-14367	-	BC146861 BX161411 NM_001001872 AK292605 BX161448 TSC_hg19_v1_chr14_-_58618906	-14435	-	NM_001206920	-300700	-	TSC_hg19_v1_chr14_+_58666880 NM_018477 AK000544 AF220190 AK222624 AK222702 BC005208 AK022534 AK315537 BC011997 DQ891294 DQ894478 AB529154 CU680156 BX248282	33593	+	TSC_hg19_v1_chr14_+_58711551 NM_002788 NM_152132	78214	+	TSC_hg19_v1_chr14_+_58711570 AK315158 BC029402 BC005265	78283	+	AK292513|C14orf37|145407|chromosome 14 open reading frame 37##BC146861|C14orf37|145407|chromosome 14 open reading frame 37##BX161411|C14orf37|145407|chromosome 14 open reading frame 37##NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37##AK292605|C14orf37|145407|chromosome 14 open reading frame 37##BX161448|C14orf37|145407|chromosome 14 open reading frame 37##NM_001206920|SLC35F4|341880|solute carrier family 35, member F4##NM_018477|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK000544|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AF220190|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK222624|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK222702|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BC005208|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK022534|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK315537|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BC011997|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##DQ891294|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##DQ894478|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BX248282|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##NM_002788|PSMA3|5684|proteasome (prosome, macropain) subunit, alpha type, 3##NM_152132|PSMA3|5684|proteasome (prosome, macropain) subunit, alpha type, 3##AK315158|PSMA3|5684|proteasome (prosome, macropain) subunit, alpha type, 3##BC029402|PSMA3|5684|proteasome (prosome, macropain) subunit, alpha type, 3##BC005265|PSMA3|5684|proteasome (prosome, macropain) subunit, alpha type, 3	0.992979	CTCF.p2:5:0.993
chr3	193498661	193498798	reg1015139.p1	9.408	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-187564	+	TSC_hg19_v1_chr3_+_193311006 BC043443 BC075805 AB011139	-187662	+	TSC_hg19_v1_chr3_+_193310928 NM_015560 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837	-187774	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	355204	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	355226	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	573345	-	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)##BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)##AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2	0.978141	CTCF.p2:14:0.978
chr1	40998635	40998764	reg1015088.p1	9.407	+	TSC_hg19_v1_chr1_+_40997324 BC091518	-1387	+	AK094072 NM_152373 TSC_hg19_v1_chr1_+_40997288	-1439	+	TSC_hg19_v1_chr1_+_40974438 AK021507 AK024797 AK094092 NM_022774 BC021969 AK023245	-24254	+	TSC_hg19_v1_chr1_-_41131126 BC003103	132435	-	D87074 NM_014747 TSC_hg19_v1_chr1_-_41131355	132644	-	NM_001142587 NM_001142588 NM_001142589 NM_014223 TSC_hg19_v1_chr1_+_41157288	158573	+	BC091518|ZNF684|127396|zinc finger protein 684##AK094072|ZNF684|127396|zinc finger protein 684##NM_152373|ZNF684|127396|zinc finger protein 684##AK021507|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##AK024797|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##AK094092|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##NM_022774|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##BC021969|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##AK023245|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##BC003103|RIMS3|9783|regulating synaptic membrane exocytosis 3##D87074|RIMS3|9783|regulating synaptic membrane exocytosis 3##NM_014747|RIMS3|9783|regulating synaptic membrane exocytosis 3##NM_001142587|NFYC|4802|nuclear transcription factor Y, gamma##NM_001142588|NFYC|4802|nuclear transcription factor Y, gamma##NM_001142589|NFYC|4802|nuclear transcription factor Y, gamma##NM_014223|NFYC|4802|nuclear transcription factor Y, gamma	0.560005	CTCF.p2:-4:0.560
chr5	101919421	101919598	reg1011554.p1	9.407	+	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	-84876	-	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	-287401	-	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-1680581	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	282021	+	M37721 TSC_hg19_v1_chr5_+_102201730 AK296521 AK290158 S75037 S75038 AB527419 AB095007 BT007419	282297	+	BC151135 BC157835 BC015325 CR627424 AK295796 AK225572 AK000132 NM_017676 TSC_hg19_v1_chr5_-_102455843	536304	-	DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase##M37721|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK296521|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK290158|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75037|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75038|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AB095007|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BT007419|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BC151135|GIN1|54826|gypsy retrotransposon integrase 1##BC157835|GIN1|54826|gypsy retrotransposon integrase 1##BC015325|GIN1|54826|gypsy retrotransposon integrase 1##CR627424|GIN1|54826|gypsy retrotransposon integrase 1##AK295796|GIN1|54826|gypsy retrotransposon integrase 1##AK225572|GIN1|54826|gypsy retrotransposon integrase 1##AK000132|GIN1|54826|gypsy retrotransposon integrase 1##NM_017676|GIN1|54826|gypsy retrotransposon integrase 1	0.997207	CTCF.p2:-57:0.997
chr7	76403744	76403862	reg1011846.p1	9.407	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-147256	-	TSC_hg19_v1_chr7_-_76256148 BC017101	-147600	-	TSC_hg19_v1_chr7_+_76178675 BC078169	-225128	+	BC036053 NM_020879 BX649000 AK292491 HM370402	348143	+	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	425333	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	641915	-	BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC017101|POMZP3|22932|POM121 and ZP3 fusion##BC078169|LOC100133091|100133091|uncharacterized LOC100133091##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)	0.479977	CTCF.p2:-10:0.480
chr3	155761800	155761914	reg1012727.p1	9.406	+	TSC_hg19_v1_chr3_+_155588481 AK315832 U10860 DQ896621 EU176462	-173288	+	TSC_hg19_v1_chr3_+_155588447 AK291504 BC012178	-173402	+	TSC_hg19_v1_chr3_+_155588438 AK302148 AK223399 AK300787	-173423	+	NM_172160 L47665 AK292693 AK303287	76494	+	NM_003471 AK292999 L39833 U16953 U17968	99005	+	NM_172159 BC043166 AK127240	246953	+	AK315832|GMPS|8833|guanine monphosphate synthetase##U10860|GMPS|8833|guanine monphosphate synthetase##DQ896621|GMPS|8833|guanine monphosphate synthetase##EU176462|GMPS|8833|guanine monphosphate synthetase##AK291504|GMPS|8833|guanine monphosphate synthetase##BC012178|GMPS|8833|guanine monphosphate synthetase##AK302148|GMPS|8833|guanine monphosphate synthetase##AK223399|GMPS|8833|guanine monphosphate synthetase##AK300787|GMPS|8833|guanine monphosphate synthetase##NM_172160|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L47665|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292693|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK303287|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_003471|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292999|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L39833|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U16953|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U17968|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1	0.581156	CTCF.p2:-7:0.581
chr3	2198060	2198154	reg1012413.p1	9.406	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	-57546	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	-1063444	+	AK126307 TSC_hg19_v1_chr3_+_577916	-1620192	+	NM_001206955	82405	+	AK095729 TSC_hg19_v1_chr3_+_2553286	355173	+	NM_001206956 NM_175613 AK057278 AK314396 BC026119	735802	+	AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##NM_001206955|CNTN4|152330|contactin 4##AK095729|CNTN4|152330|contactin 4##NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4	0.501889	CTCF.p2:16:0.479
chr9	14768636	14768768	reg1013315.p1	9.406	+	AF400435 BC069371 BC069405 BC069491 BC069503 BC103976 BC103977 CU686794 CU686860 NM_005454	-46011	-	TSC_hg19_v1_chr9_-_14693475 BC042558 NM_178566	-75233	-	AF161360 TSC_hg19_v1_chr9_-_14693311 AK292960	-75382	-	BC031064 NM_001177704	10828	-	AB160987 TSC_hg19_v1_chr9_-_14869016	100297	-	BX537574 NM_144966	142290	-	AF400435|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069371|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069405|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069491|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069503|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC103976|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC103977|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##NM_005454|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC042558|ZDHHC21|340481|zinc finger, DHHC-type containing 21##NM_178566|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AF161360|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AK292960|ZDHHC21|340481|zinc finger, DHHC-type containing 21##BC031064|FREM1|158326|FRAS1 related extracellular matrix 1##NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1##AB160987|FREM1|158326|FRAS1 related extracellular matrix 1##BX537574|FREM1|158326|FRAS1 related extracellular matrix 1##NM_144966|FREM1|158326|FRAS1 related extracellular matrix 1	0.961893	CTCF.p2:5:0.962
chr10	105648192	105648330	reg1012523.p1	9.405	+	TSC_hg19_v1_chr10_-_105615306 NM_014631	-32991	-	TSC_hg19_v1_chr10_-_105452931 AK294736 AK295314 AK315983 AK295660	-195311	-	TSC_hg19_v1_chr10_-_105437934 AK304828	-210340	-	TSC_hg19_v1_chr10_-_105677943 BC017400	29668	-	TSC_hg19_v1_chr10_-_105677986 NM_024928	29754	-	TSC_hg19_v1_chr10_+_105726926 AK307389	78625	+	NM_014631|SH3PXD2A|9644|SH3 and PX domains 2A##AK294736|SH3PXD2A|9644|SH3 and PX domains 2A##AK295314|SH3PXD2A|9644|SH3 and PX domains 2A##AK315983|SH3PXD2A|9644|SH3 and PX domains 2A##AK295660|SH3PXD2A|9644|SH3 and PX domains 2A##AK304828|SH3PXD2A|9644|SH3 and PX domains 2A##BC017400|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1##NM_024928|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1##AK307389|SLK|9748|STE20-like kinase	0.01446	
chr2	10054942	10055059	reg1013284.p2	9.405	+	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	-71380	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-283875	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	-283951	-	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	36850	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	128792	+	NM_001177718 AK302880 TSC_hg19_v1_chr2_+_10184414	129409	+	NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11##NM_001177718|KLF11|8462|Kruppel-like factor 11##AK302880|KLF11|8462|Kruppel-like factor 11	0.0	
chr6	16410042	16410171	reg1014405.p1	9.405	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-171255	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-266796	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-280669	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	351591	-	NM_001190766	692382	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	871748	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.944689	CTCF.p2:-8:0.945
chr12	124286257	124286369	reg1012277.p1	9.404	+	NM_207437	-39272	+	TSC_hg19_v1_chr12_+_124196946 AK289391 AF112972 HQ258004	-89287	+	TSC_hg19_v1_chr12_+_124196899 BC022300	-89417	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	170886	-	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	171416	+	AK126577 NM_181709	487396	+	NM_207437|DNAH10|196385|dynein, axonemal, heavy chain 10##AK289391|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##AF112972|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##HQ258004|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##BC022300|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A	0.0	
chr20	21596316	21596423	reg1011919.p2	9.404	+	NM_002509	-101706	-	NM_033176 TSC_hg19_v1_chr20_-_21378181	-218255	-	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	-312394	+	TSC_hg19_v1_chr20_+_21686296 NM_006192	89925	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	90164	+	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	968547	-	NM_002509|NKX2-2|4821|NK2 homeobox 2##NM_033176|NKX2-4|644524|NK2 homeobox 4##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2##NM_006192|PAX1|5075|paired box 1##BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2	0.994797	CTCF.p2:8:0.995
chr2	44895584	44895733	reg1016824.p1	9.404	+	NM_024766 TSC_hg19_v1_chr2_+_44589085 BC029359 AK027104 BC053733	-306566	+	AK131463 NM_001171603 NM_001171617	-306687	-	AB007896 TSC_hg19_v1_chr2_-_44588634 BC151236 AK025649 NM_001171606 NM_001171613	-306978	-	AJ012611 NM_005413 AL162671	273388	+	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	340892	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	899470	-	NM_024766|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC029359|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK027104|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC053733|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK131463|PREPL|9581|prolyl endopeptidase-like##NM_001171603|PREPL|9581|prolyl endopeptidase-like##NM_001171617|PREPL|9581|prolyl endopeptidase-like##AB007896|PREPL|9581|prolyl endopeptidase-like##BC151236|PREPL|9581|prolyl endopeptidase-like##AK025649|PREPL|9581|prolyl endopeptidase-like##NM_001171606|PREPL|9581|prolyl endopeptidase-like##NM_001171613|PREPL|9581|prolyl endopeptidase-like##AJ012611|SIX3|6496|SIX homeobox 3##NM_005413|SIX3|6496|SIX homeobox 3##AL162671|SIX3|6496|SIX homeobox 3##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1	0.0	
chrX	107263894	107264029	reg1015548.p1	9.404	+	BC150140 AF285598 NM_031273	-38368	-	TSC_hg19_v1_chrX_+_107069526 AF196481	-194389	+	Y18880 TSC_hg19_v1_chrX_+_107069473	-194494	+	BX648658 NM_001170553 NM_182607 AK301783 BC043216 BX640913 AK315846 AK301311 AK292472	24298	+	AB528690 BT019689 GQ129344 GQ129345 AK295996 AK309326 TSC_hg19_v1_chrX_-_107334773 AB009619 AY057056 BC011960 AK058108 D83197 NM_002814 NM_170750	70850	-	BC061696 NM_052936 NM_178270 BC041862 AK293533 AJ504651 AK314429 AJ320508 AJ320509 AK054927	71006	+	AF285598|TEX13B|56156|testis expressed 13B##NM_031273|TEX13B|56156|testis expressed 13B##AF196481|MID2|11043|midline 2##Y18880|MID2|11043|midline 2##BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1##BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1##BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1##BT019689|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129344|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129345|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK295996|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK309326|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AB009619|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AY057056|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BC011960|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK058108|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##D83197|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_002814|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_170750|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BC061696|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##NM_052936|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##NM_178270|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##BC041862|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK293533|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ504651|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK314429|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ320508|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ320509|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK054927|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)	0.23806	CTCF.p2:-5:0.238
chr12	118815815	118815966	reg1015057.p1	9.403	+	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	-1488	+	TSC_hg19_v1_chr12_-_118810713 NM_016281	-5160	-	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	-5262	-	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	603457	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	800789	+	BC040553 NM_178499	956626	+	BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_016281|TAOK3|51347|TAO kinase 3##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60	0.972258	CTCF.p2:-1:0.972
chr22	23278009	23278158	reg1012220.p2	9.403	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	-48000	+	TSC_hg19_v1_chr22_+_23222900 AK127411 S77601 X57802 X57803 X57816 X57818 AB369252 AF026919 AF026925 AY190825 L26400 AF490955 AF490961	-55154	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	-64390	+	TSC_hg19_v1_chr22_+_23412527 BC037333 BC026342 NM_002073	134433	+	AK312519 TSC_hg19_v1_chr22_+_23412728 AK293653	134646	+	BC008986 AF133587 NM_014433 AK299530 AK310327	206160	-	AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AB369252|CYAT1|100290481|immunoglobulin lambda light chain-like##BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3##BC037333|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC026342|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##NM_002073|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK312519|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK293653|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1##AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1##NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1	0.418153	CTCF.p2:36:0.323
chr5	50047015	50047132	reg1011001.p1	9.403	+	TSC_hg19_v1_chr5_+_49962920 AB463183 AM393004	-84146	+	NM_001178056 NM_024615 AK289369 TSC_hg19_v1_chr5_+_49962800 AL834477 BC075801	-84282	+	AK298680 AK314466 BC105789 NM_001178055	-85341	+	BC031213 NM_002202	631884	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	632180	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	2036916	+	AM393004|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178056|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_024615|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK289369|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AL834477|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC075801|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC031213|ISL1|3670|ISL LIM homeobox 1##NM_002202|ISL1|3670|ISL LIM homeobox 1##AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1	0.997507	CTCF.p2:-1:0.998
chr7	13302702	13302816	reg1012450.p2	9.403	+	TSC_hg19_v1_chr7_+_12727257 AK313233 U73960	-575513	+	NM_001195396 NM_005738	-575849	+	TSC_hg19_v1_chr7_+_12726499 NM_001037164 NM_212460 BC039123 BC001111 BC003027	-576273	+	AK293802 AK311134 AK311194 CR627389 AK294572 AK311707 AK316007 AK299693 NM_001163150 NM_001163151 NM_001163152	723223	-	TSC_hg19_v1_chr7_-_14029292 AB209202 BC098403 AK312863	726545	-	NM_001163147 NM_004956	726882	-	AK313233|ARL4A|10124|ADP-ribosylation factor-like 4A##U73960|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_001195396|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_005738|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_001037164|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_212460|ARL4A|10124|ADP-ribosylation factor-like 4A##BC039123|ARL4A|10124|ADP-ribosylation factor-like 4A##BC001111|ARL4A|10124|ADP-ribosylation factor-like 4A##BC003027|ARL4A|10124|ADP-ribosylation factor-like 4A##AK293802|ETV1|2115|ets variant 1##AK311134|ETV1|2115|ets variant 1##AK311194|ETV1|2115|ets variant 1##CR627389|ETV1|2115|ets variant 1##AK294572|ETV1|2115|ets variant 1##AK311707|ETV1|2115|ets variant 1##AK316007|ETV1|2115|ets variant 1##AK299693|ETV1|2115|ets variant 1##NM_001163150|ETV1|2115|ets variant 1##NM_001163151|ETV1|2115|ets variant 1##NM_001163152|ETV1|2115|ets variant 1##AB209202|ETV1|2115|ets variant 1##BC098403|ETV1|2115|ets variant 1##AK312863|ETV1|2115|ets variant 1##NM_001163147|ETV1|2115|ets variant 1##NM_004956|ETV1|2115|ets variant 1	0.683907	CTCF.p2:6:0.684
chr5	18394446	18394553	reg1013396.p2	9.402	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-1176659	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-1176887	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-1458114	-	AK295087 BC031051 NM_001167667 NM_004934	1593823	-	TSC_hg19_v1_chr5_+_21459621 AK290693	3065110	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	3065149	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.982671	CTCF.p2:-2:0.983
chr10	111896942	111897089	reg1013668.p1	9.401	+	AK291488 TSC_hg19_v1_chr10_+_111767988 U37122 BC043143	-129048	+	TSC_hg19_v1_chr10_+_111767741 BX647403 NM_001121 NM_016824 BC062559 BX648016	-129286	+	NM_019903 AB209810 BC057285	-131234	+	TSC_hg19_v1_chr10_+_111967381 BC035128 NM_130439	70344	+	BC012907 NM_001008541	72973	+	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	88806	+	AK291488|ADD3|120|adducin 3 (gamma)##U37122|ADD3|120|adducin 3 (gamma)##BC043143|ADD3|120|adducin 3 (gamma)##BX647403|ADD3|120|adducin 3 (gamma)##NM_001121|ADD3|120|adducin 3 (gamma)##NM_016824|ADD3|120|adducin 3 (gamma)##BC062559|ADD3|120|adducin 3 (gamma)##BX648016|ADD3|120|adducin 3 (gamma)##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)##BC035128|MXI1|4601|MAX interactor 1##NM_130439|MXI1|4601|MAX interactor 1##BC012907|MXI1|4601|MAX interactor 1##NM_001008541|MXI1|4601|MAX interactor 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1	0.907881	CTCF.p2:-25:0.908
chr1	198125361	198125505	reg1012797.p1	9.401	+	TSC_hg19_v1_chr1_+_197886502 AY273889 NM_020204	-238926	+	AJ296272 NM_001014434 AJ277915	-243794	+	BC130608 BC130634 NM_001024594 HQ258066 BC038214	-253702	+	TSC_hg19_v1_chr1_+_198126162 NM_133494 AK313411	621	+	NM_133262 NM_133326	384641	-	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	482740	+	AY273889|LHX9|56956|LIM homeobox 9##NM_020204|LHX9|56956|LIM homeobox 9##AJ296272|LHX9|56956|LIM homeobox 9##NM_001014434|LHX9|56956|LIM homeobox 9##AJ277915|LHX9|56956|LIM homeobox 9##BC130608|C1orf53|388722|chromosome 1 open reading frame 53##BC130634|C1orf53|388722|chromosome 1 open reading frame 53##NM_001024594|C1orf53|388722|chromosome 1 open reading frame 53##HQ258066|C1orf53|388722|chromosome 1 open reading frame 53##BC038214|C1orf53|388722|chromosome 1 open reading frame 53##NM_133494|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##AK313411|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	0.0	
chr1	29447853	29447968	reg1012638.p1	9.401	+	TSC_hg19_v1_chr1_-_29309157 D28453	-138785	-	TSC_hg19_v1_chr1_+_29241080 NM_001166006 BC039079 AK310655	-206829	+	TSC_hg19_v1_chr1_+_29213624 M14993 M61733 J03796	-234253	+	BC110336 NM_001171868	1102	-	BC064375 BC082989 NM_001003682	2503	-	AB527790 BT007415 CU678194 DQ893846 L14076 TSC_hg19_v1_chr1_-_29508334	60395	-	NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M14993|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M61733|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##J03796|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##BC110336|TMEM200B|399474|transmembrane protein 200B##NM_001171868|TMEM200B|399474|transmembrane protein 200B##BC064375|TMEM200B|399474|transmembrane protein 200B##BC082989|TMEM200B|399474|transmembrane protein 200B##NM_001003682|TMEM200B|399474|transmembrane protein 200B##BT007415|SRSF4|6429|serine/arginine-rich splicing factor 4##DQ893846|SRSF4|6429|serine/arginine-rich splicing factor 4##L14076|SRSF4|6429|serine/arginine-rich splicing factor 4	0.707464	CTCF.p2:-15:0.707
chr11	107879489	107879613	reg1013506.p1	9.400	+	NM_003478 AK125294	-119	+	TSC_hg19_v1_chr11_+_107799171 AK292969 BC028064 NM_017516 X99962	-80316	+	NM_017515	-149638	-	TSC_hg19_v1_chr11_+_107879644 AK292575 BC063306	76	+	X81882 BC017838 TSC_hg19_v1_chr11_+_107880062 CU687672 AF017061 AF327710	478	+	TSC_hg19_v1_chr11_+_107992293 D90228 NM_000019 AK312574 BC010942 BC063853 AB590491	112740	+	NM_003478|CUL5|8065|cullin 5##AK125294|CUL5|8065|cullin 5##AK292969|RAB39A|54734|RAB39A, member RAS oncogene family##BC028064|RAB39A|54734|RAB39A, member RAS oncogene family##NM_017516|RAB39A|54734|RAB39A, member RAS oncogene family##X99962|RAB39A|54734|RAB39A, member RAS oncogene family##NM_017515|SLC35F2|54733|solute carrier family 35, member F2##AK292575|CUL5|8065|cullin 5##BC063306|CUL5|8065|cullin 5##X81882|CUL5|8065|cullin 5##BC017838|CUL5|8065|cullin 5##AF017061|CUL5|8065|cullin 5##AF327710|CUL5|8065|cullin 5##D90228|ACAT1|38|acetyl-CoA acetyltransferase 1##NM_000019|ACAT1|38|acetyl-CoA acetyltransferase 1##AK312574|ACAT1|38|acetyl-CoA acetyltransferase 1##BC010942|ACAT1|38|acetyl-CoA acetyltransferase 1##BC063853|ACAT1|38|acetyl-CoA acetyltransferase 1	0.997017	CTCF.p2:1:0.997
chr2	63926325	63926461	reg1013595.p2	9.400	+	TSC_hg19_v1_chr2_+_63816146 NM_001199111 NM_001199112 AK295931 AK300719	-110093	+	TSC_hg19_v1_chr2_+_63816101 AK312331 BC001484 D55654 AK307273	-110280	+	TSC_hg19_v1_chr2_-_63815908 NM_015910	-110546	-	TSC_hg19_v1_chr2_+_64068125 NM_001001521 BC002954 U27460	141810	+	BX647825 NM_006759 AK314263 TSC_hg19_v1_chr2_+_64069029 BC047004 BC000173	142633	+	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	319869	-	NM_001199111|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##NM_001199112|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##AK295931|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##AK300719|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##AK312331|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##BC001484|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##D55654|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##AK307273|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##NM_015910|WDPCP|51057|WD repeat containing planar cell polarity effector##NM_001001521|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC002954|UGP2|7360|UDP-glucose pyrophosphorylase 2##U27460|UGP2|7360|UDP-glucose pyrophosphorylase 2##BX647825|UGP2|7360|UDP-glucose pyrophosphorylase 2##NM_006759|UGP2|7360|UDP-glucose pyrophosphorylase 2##AK314263|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC047004|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC000173|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)	0.924423	CTCF.p2:-16:0.924
chr8	94373437	94373596	reg1015175.p1	9.400	+	BC089453 NM_001242668	-194438	-	NM_001191035 TSC_hg19_v1_chr8_-_93978373 BC031029 AK097956 BC110326 DQ351291 NM_001171795 NM_001171796 NM_001171797 NM_001171798 NM_001171799	-395194	-	AK096398 NM_001191036	-395751	-	BC037909 TSC_hg19_v1_chr8_-_94712710	339170	-	BC014598 TSC_hg19_v1_chr8_+_94712788 BC108707 NM_145269 CR627475 DQ327715 DQ327716 AK096298 CU677061	339288	+	BC039260 TSC_hg19_v1_chr8_-_94753192	379675	-	BC089453|LOC389676|389676|uncharacterized LOC389676##NM_001242668|LOC389676|389676|uncharacterized LOC389676##NM_001191035|C8orf83|286144|chromosome 8 open reading frame 83##BC031029|C8orf83|286144|chromosome 8 open reading frame 83##AK097956|C8orf83|286144|chromosome 8 open reading frame 83##BC110326|C8orf83|286144|chromosome 8 open reading frame 83##DQ351291|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171795|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171796|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171797|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171798|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171799|C8orf83|286144|chromosome 8 open reading frame 83##AK096398|C8orf83|286144|chromosome 8 open reading frame 83##NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83##BC037909|LOC642924|642924|uncharacterized LOC642924##BC014598|FAM92A1|137392|family with sequence similarity 92, member A1##BC108707|FAM92A1|137392|family with sequence similarity 92, member A1##NM_145269|FAM92A1|137392|family with sequence similarity 92, member A1##CR627475|FAM92A1|137392|family with sequence similarity 92, member A1##DQ327715|FAM92A1|137392|family with sequence similarity 92, member A1##DQ327716|FAM92A1|137392|family with sequence similarity 92, member A1##AK096298|FAM92A1|137392|family with sequence similarity 92, member A1##BC039260|RBM12B|389677|RNA binding motif protein 12B	0.231677	CTCF.p2:-1:0.232
chr2	27926761	27926870	reg1012852.p1	9.399	+	TSC_hg19_v1_chr2_+_27886755 AK300958	-40045	+	BC074000 AB018307 NM_014860 AF197954 AK000329 AK304889 BC045638 AF224759 TSC_hg19_v1_chr2_-_27886542	-40323	-	AK001486 NM_018158 BC098302 BC098358 BC099711 BC099739 AY028435	-40466	+	TSC_hg19_v1_chr2_+_27994585 BC090047 NM_004891 NM_145330	67768	+	TSC_hg19_v1_chr2_+_27994614 BC020834 AF047440 BC087846 BC009475 CR456888 CR542117	67847	+	CU675980 AK300989 TSC_hg19_v1_chr2_-_28113253 AJ404857 NM_022128 BX648909 AY643715 BC017425	186435	-	AK300958|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC074000|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AB018307|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##NM_014860|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AF197954|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AK000329|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AK304889|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##BC045638|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AF224759|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AK001486|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##NM_018158|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC098302|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC098358|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC099711|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC099739|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##AY028435|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC090047|MRPL33|9553|mitochondrial ribosomal protein L33##NM_004891|MRPL33|9553|mitochondrial ribosomal protein L33##NM_145330|MRPL33|9553|mitochondrial ribosomal protein L33##BC020834|MRPL33|9553|mitochondrial ribosomal protein L33##AF047440|MRPL33|9553|mitochondrial ribosomal protein L33##BC087846|MRPL33|9553|mitochondrial ribosomal protein L33##BC009475|MRPL33|9553|mitochondrial ribosomal protein L33##CR456888|MRPL33|9553|mitochondrial ribosomal protein L33##CR542117|MRPL33|9553|mitochondrial ribosomal protein L33##AK300989|RBKS|64080|ribokinase##AJ404857|RBKS|64080|ribokinase##NM_022128|RBKS|64080|ribokinase##BX648909|RBKS|64080|ribokinase##AY643715|RBKS|64080|ribokinase##BC017425|RBKS|64080|ribokinase	0.999778	CTCF.p2:-9:1.000
chr2	637096	637226	reg1010757.p2	9.399	+	BC033490 NM_001002919	-348917	-	TSC_hg19_v1_chr2_+_264946 NM_001040649 NM_004300 NM_007099 AK289934 M83653 BC020699 AK291861 BC007422 AB209838 BC106011 AB385551 BT007136 Y16846 M83654 M87546 S62885	-372249	+	BC043234 TSC_hg19_v1_chr2_-_264802 AK292312 BC030778 BC034974	-372382	-	TSC_hg19_v1_chr2_-_677406 BC016010 AL137269 NM_152834	40250	-	TSC_hg19_v1_chr2_+_946534 BC035783 NM_018968 AJ003029 BC125251	309418	+	BC063107 NM_000547 NM_001206744 NM_001206745 NM_175719 BC095448 M17755 J02969 J02970 X17358 Y00406	780094	+	BC033490|FAM150B|285016|family with sequence similarity 150, member B##NM_001002919|FAM150B|285016|family with sequence similarity 150, member B##NM_001040649|ACP1|52|acid phosphatase 1, soluble##NM_004300|ACP1|52|acid phosphatase 1, soluble##NM_007099|ACP1|52|acid phosphatase 1, soluble##AK289934|ACP1|52|acid phosphatase 1, soluble##M83653|ACP1|52|acid phosphatase 1, soluble##BC020699|ACP1|52|acid phosphatase 1, soluble##AK291861|ACP1|52|acid phosphatase 1, soluble##BC007422|ACP1|52|acid phosphatase 1, soluble##AB209838|ACP1|52|acid phosphatase 1, soluble##BC106011|ACP1|52|acid phosphatase 1, soluble##BT007136|ACP1|52|acid phosphatase 1, soluble##Y16846|ACP1|52|acid phosphatase 1, soluble##M83654|ACP1|52|acid phosphatase 1, soluble##M87546|ACP1|52|acid phosphatase 1, soluble##S62885|ACP1|52|acid phosphatase 1, soluble##BC043234|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##AK292312|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC030778|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC034974|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC016010|TMEM18|129787|transmembrane protein 18##AL137269|TMEM18|129787|transmembrane protein 18##NM_152834|TMEM18|129787|transmembrane protein 18##BC035783|SNTG2|54221|syntrophin, gamma 2##NM_018968|SNTG2|54221|syntrophin, gamma 2##AJ003029|SNTG2|54221|syntrophin, gamma 2##BC125251|SNTG2|54221|syntrophin, gamma 2##BC063107|TPO|7173|thyroid peroxidase##NM_000547|TPO|7173|thyroid peroxidase##NM_001206744|TPO|7173|thyroid peroxidase##NM_001206745|TPO|7173|thyroid peroxidase##NM_175719|TPO|7173|thyroid peroxidase##BC095448|TPO|7173|thyroid peroxidase##M17755|TPO|7173|thyroid peroxidase##J02969|TPO|7173|thyroid peroxidase##J02970|TPO|7173|thyroid peroxidase##X17358|TPO|7173|thyroid peroxidase##Y00406|TPO|7173|thyroid peroxidase	0.217067	CTCF.p2:5:0.217
chr1	175115814	175115944	reg1015222.p1	9.398	+	AK127044 NM_022093	-78886	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-123308	-	TSC_hg19_v1_chr1_+_174969165 BC005865 AK294042 AF314752 BC022352 AL035305 AF057356 BC067823 BC078151 AF275803 AY423723	-146669	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	46151	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	596831	-	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	1060286	-	AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK294042|CACYBP|27101|calcyclin binding protein##AF314752|CACYBP|27101|calcyclin binding protein##BC022352|CACYBP|27101|calcyclin binding protein##AL035305|CACYBP|27101|calcyclin binding protein##AF057356|CACYBP|27101|calcyclin binding protein##BC067823|CACYBP|27101|calcyclin binding protein##BC078151|CACYBP|27101|calcyclin binding protein##AF275803|CACYBP|27101|calcyclin binding protein##AY423723|CACYBP|27101|calcyclin binding protein##D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2	0.931332	CTCF.p2:0:0.931
chr14	51836689	51836812	reg1013903.p1	9.398	+	NM_030755 AB048246 TSC_hg19_v1_chr14_+_51706980 AK302416 BC036460 BC016769 BC050366 AK075395 BC032834 AK303134 AL080080 BC056874 AY358640 AK312905 DQ891674 DQ894860 CU690352	-129801	+	NM_015163 NM_052978	-274329	-	TSC_hg19_v1_chr14_-_51562045 AK055388	-274697	-	AL833158 NM_001042481	119104	+	TSC_hg19_v1_chr14_+_52118627 BX161430 NM_152330 BC020521 AK315764 AK055545 BX647863	281880	+	NM_001243773 NM_001243774 NM_053064 AK092371	490326	+	NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1##AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1##BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1##BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1##BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1##AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1##BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1##AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1##AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1##BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1##AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1##AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1##NM_015163|TRIM9|114088|tripartite motif containing 9##NM_052978|TRIM9|114088|tripartite motif containing 9##AK055388|TRIM9|114088|tripartite motif containing 9##AL833158|FRMD6|122786|FERM domain containing 6##NM_001042481|FRMD6|122786|FERM domain containing 6##BX161430|FRMD6|122786|FERM domain containing 6##NM_152330|FRMD6|122786|FERM domain containing 6##BC020521|FRMD6|122786|FERM domain containing 6##AK315764|FRMD6|122786|FERM domain containing 6##AK055545|FRMD6|122786|FERM domain containing 6##BX647863|FRMD6|122786|FERM domain containing 6##NM_001243773|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_001243774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	0.204483	CTCF.p2:-12:0.204
chr17_ctg5_hap1	501697	501821	reg1013388.p2	9.398	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.962456	CTCF.p2:4:0.962
chr3	143604798	143604933	reg1013662.p1	9.398	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	-37598	-	BC067737 TSC_hg19_v1_chr3_+_142895211	-709694	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-766214	+	NM_173552 AK315082	85787	+	TSC_hg19_v1_chr3_+_143690915 BC037293	86125	+	NM_001134470 AK294020	87352	+	AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58##NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58##AK294020|C3orf58|205428|chromosome 3 open reading frame 58	0.95896	CTCF.p2:-12:0.959
chr15	44870798	44870936	reg1015642.p1	9.397	+	TSC_hg19_v1_chr15_+_44829374 AK300659	-41485	+	BC002719 U97670 TSC_hg19_v1_chr15_+_44829352 AK002006	-41525	+	TSC_hg19_v1_chr15_+_44829313 AK023388	-41555	+	TSC_hg19_v1_chr15_-_44955849 AB385508 AB470308 AB470309 AB470310 AB058743 BC153879 BC047416	84977	-	TSC_hg19_v1_chr15_-_44955887 BC150640 NM_001160227 NM_025137	85013	-	BC036924 NM_001145112	98218	-	AK300659|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##BC002719|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##U97670|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##AK002006|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##AK023388|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC150640|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_001160227|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_025137|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC036924|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##NM_001145112|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)	0.958015	CTCF.p2:-12:0.958
chr8	101950937	101951044	reg1012642.p1	9.397	+	TSC_hg19_v1_chr8_-_101936525 DQ185048	-14466	-	BC041863 TSC_hg19_v1_chr8_-_101734972	-216024	-	Y00345 TSC_hg19_v1_chr8_-_101734316 AK130523 AK303120 NM_002568	-216673	-	TSC_hg19_v1_chr8_-_101962797 NM_001135702	11809	-	TSC_hg19_v1_chr8_-_101963538 NM_001135700 NM_001135701	12472	-	BC051814 TSC_hg19_v1_chr8_-_101963715	12706	-	DQ185048|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##BC041863|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##Y00345|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK130523|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK303120|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##NM_002568|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##NM_001135702|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135700|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135701|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##BC051814|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	0.682979	CTCF.p2:-6:0.683
chr11	118436739	118436884	reg1015537.p1	9.396	+	TSC_hg19_v1_chr11_-_118436639 AL136934 BC011647 AK289521 AJ249980 BC012802 BC022856 AK025480 NM_001168618 NM_020153	-115	-	TSC_hg19_v1_chr11_+_118401916 AK075437 AK293670 AK027305 AK056325 AK096260 AK124814 AK225415 AK292359 AK297255 AY358919 BC042896 BC051841	-34892	+	TSC_hg19_v1_chr11_+_118401755 NM_001144034 NM_001144035 NM_001144036 NM_001144037 NM_001144038 NM_032780	-35033	+	TSC_hg19_v1_chr11_+_118443110 NM_001142281 NM_001655 AK304019 AK312298 BC064936 BX640860	6303	+	TSC_hg19_v1_chr11_+_118443146 X81197 BC080638 BC093636 BC093638	6347	+	AB094090 NM_015157	40401	+	AL136934|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##BC011647|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##AK289521|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##AJ249980|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##BC012802|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##BC022856|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##AK025480|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##NM_001168618|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##NM_020153|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##AK075437|TMEM25|84866|transmembrane protein 25##AK293670|TMEM25|84866|transmembrane protein 25##AK027305|TMEM25|84866|transmembrane protein 25##AK056325|TMEM25|84866|transmembrane protein 25##AK096260|TMEM25|84866|transmembrane protein 25##AK124814|TMEM25|84866|transmembrane protein 25##AK225415|TMEM25|84866|transmembrane protein 25##AK292359|TMEM25|84866|transmembrane protein 25##AK297255|TMEM25|84866|transmembrane protein 25##AY358919|TMEM25|84866|transmembrane protein 25##BC042896|TMEM25|84866|transmembrane protein 25##BC051841|TMEM25|84866|transmembrane protein 25##NM_001144034|TMEM25|84866|transmembrane protein 25##NM_001144035|TMEM25|84866|transmembrane protein 25##NM_001144036|TMEM25|84866|transmembrane protein 25##NM_001144037|TMEM25|84866|transmembrane protein 25##NM_001144038|TMEM25|84866|transmembrane protein 25##NM_032780|TMEM25|84866|transmembrane protein 25##NM_001142281|ARCN1|372|archain 1##NM_001655|ARCN1|372|archain 1##AK304019|ARCN1|372|archain 1##AK312298|ARCN1|372|archain 1##BC064936|ARCN1|372|archain 1##BX640860|ARCN1|372|archain 1##X81197|ARCN1|372|archain 1##BC080638|ARCN1|372|archain 1##BC093636|ARCN1|372|archain 1##BC093638|ARCN1|372|archain 1##AB094090|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##NM_015157|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1	0.268888	CTCF.p2:11:0.269
chr21	44013499	44013594	reg1011316.p2	9.396	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	-79543	+	AJ269529 NM_018964	-93805	+	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	-97166	-	TSC_hg19_v1_chr21_+_44073730 NM_001001567 NM_001001568 NM_001001569 NM_001001570 NM_001001571 NM_001001572 NM_001001573 NM_001001574 NM_001001575 NM_001001576 NM_001001577 NM_001001578 NM_001001579 NM_001001580 NM_001001581 NM_001001582 NM_001001583 NM_001001584 NM_001001585 NM_002606 AF048837 AY701187 BC009047 AK314679 AY196299 AY196300 AY196301 AY196302 AY196303 AY196304 AY196305 AY196306 AY196307 AY196308 AY196309 AY196310 AY196311 AY196312 AY196313 AY196314 AK001307 AK294112 AF067223 AF067224 AF067225 AF067226 AB527758 AY242121 BT007016 GQ129331 GQ129332	60241	+	AB590172 CU675357 DQ892967 DQ896215 TSC_hg19_v1_chr21_-_44299643 AK292923 AK315008 AJ243912 AJ243913 BC006341	286078	-	TSC_hg19_v1_chr21_-_44299690 BC001074 NM_018669 NM_033661 AK298015	286138	-	BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_001001567|PDE9A|5152|phosphodiesterase 9A##NM_001001568|PDE9A|5152|phosphodiesterase 9A##NM_001001569|PDE9A|5152|phosphodiesterase 9A##NM_001001570|PDE9A|5152|phosphodiesterase 9A##NM_001001571|PDE9A|5152|phosphodiesterase 9A##NM_001001572|PDE9A|5152|phosphodiesterase 9A##NM_001001573|PDE9A|5152|phosphodiesterase 9A##NM_001001574|PDE9A|5152|phosphodiesterase 9A##NM_001001575|PDE9A|5152|phosphodiesterase 9A##NM_001001576|PDE9A|5152|phosphodiesterase 9A##NM_001001577|PDE9A|5152|phosphodiesterase 9A##NM_001001578|PDE9A|5152|phosphodiesterase 9A##NM_001001579|PDE9A|5152|phosphodiesterase 9A##NM_001001580|PDE9A|5152|phosphodiesterase 9A##NM_001001581|PDE9A|5152|phosphodiesterase 9A##NM_001001582|PDE9A|5152|phosphodiesterase 9A##NM_001001583|PDE9A|5152|phosphodiesterase 9A##NM_001001584|PDE9A|5152|phosphodiesterase 9A##NM_001001585|PDE9A|5152|phosphodiesterase 9A##NM_002606|PDE9A|5152|phosphodiesterase 9A##AF048837|PDE9A|5152|phosphodiesterase 9A##AY701187|PDE9A|5152|phosphodiesterase 9A##BC009047|PDE9A|5152|phosphodiesterase 9A##AK314679|PDE9A|5152|phosphodiesterase 9A##AY196299|PDE9A|5152|phosphodiesterase 9A##AY196300|PDE9A|5152|phosphodiesterase 9A##AY196301|PDE9A|5152|phosphodiesterase 9A##AY196302|PDE9A|5152|phosphodiesterase 9A##AY196303|PDE9A|5152|phosphodiesterase 9A##AY196304|PDE9A|5152|phosphodiesterase 9A##AY196305|PDE9A|5152|phosphodiesterase 9A##AY196306|PDE9A|5152|phosphodiesterase 9A##AY196307|PDE9A|5152|phosphodiesterase 9A##AY196308|PDE9A|5152|phosphodiesterase 9A##AY196309|PDE9A|5152|phosphodiesterase 9A##AY196310|PDE9A|5152|phosphodiesterase 9A##AY196311|PDE9A|5152|phosphodiesterase 9A##AY196312|PDE9A|5152|phosphodiesterase 9A##AY196313|PDE9A|5152|phosphodiesterase 9A##AY196314|PDE9A|5152|phosphodiesterase 9A##AK001307|PDE9A|5152|phosphodiesterase 9A##AK294112|PDE9A|5152|phosphodiesterase 9A##AF067223|PDE9A|5152|phosphodiesterase 9A##AF067224|PDE9A|5152|phosphodiesterase 9A##AF067225|PDE9A|5152|phosphodiesterase 9A##AF067226|PDE9A|5152|phosphodiesterase 9A##AY242121|PDE9A|5152|phosphodiesterase 9A##BT007016|PDE9A|5152|phosphodiesterase 9A##GQ129331|PDE9A|5152|phosphodiesterase 9A##GQ129332|PDE9A|5152|phosphodiesterase 9A##DQ892967|WDR4|10785|WD repeat domain 4##DQ896215|WDR4|10785|WD repeat domain 4##AK292923|WDR4|10785|WD repeat domain 4##AK315008|WDR4|10785|WD repeat domain 4##AJ243912|WDR4|10785|WD repeat domain 4##AJ243913|WDR4|10785|WD repeat domain 4##BC006341|WDR4|10785|WD repeat domain 4##BC001074|WDR4|10785|WD repeat domain 4##NM_018669|WDR4|10785|WD repeat domain 4##NM_033661|WDR4|10785|WD repeat domain 4##AK298015|WDR4|10785|WD repeat domain 4	0.899509	CTCF.p2:-6:0.900
chr3	141741303	141741408	reg1011379.p1	9.396	+	AL080206 NM_001178140	-22147	-	TSC_hg19_v1_chr3_+_141595539 U51478 CU680074	-145778	+	TSC_hg19_v1_chr3_+_141595484 NM_001679 AK131061 AK293697 BC001469 BC011835	-145918	+	BC002405 AK303634 U18422 BC007976 AK303181 TSC_hg19_v1_chr3_-_141747469 NM_001178141 NM_001178142 NM_006286	6115	-	TSC_hg19_v1_chr3_-_141868338 AK314786 BC013993 U35117 NM_001178138 NM_001178139	126969	-	DQ891607 DQ894800 TSC_hg19_v1_chr3_-_141944428 AK313792 BX648681 BC032470 AK127641 BX648359 AK310761	203010	-	AL080206|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178140|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U51478|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##NM_001679|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK131061|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK293697|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##BC001469|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##BC011835|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK314786|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC013993|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U35117|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178138|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178139|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##DQ891607|GK5|256356|glycerol kinase 5 (putative)##DQ894800|GK5|256356|glycerol kinase 5 (putative)##AK313792|GK5|256356|glycerol kinase 5 (putative)##BX648681|GK5|256356|glycerol kinase 5 (putative)##BC032470|GK5|256356|glycerol kinase 5 (putative)##AK127641|GK5|256356|glycerol kinase 5 (putative)##BX648359|GK5|256356|glycerol kinase 5 (putative)##AK310761|GK5|256356|glycerol kinase 5 (putative)	0.989722	CTCF.p2:-2:0.990
chr5	94999964	95000096	reg1013413.p1	9.396	+	NM_001131066 BC048979 NM_001131065 NM_173362 BC035110	-17498	+	JF810884 NM_199243	-44051	+	AK303855 TSC_hg19_v1_chr5_+_94890804 AK316253 NM_198150 AY358596 BC050392 BC015723 BC130329 BC144160 BC144161 BC080567 BC036047 AY875939 HQ258292	-109151	+	AY027526 AK292338 AK310260 BC047333 AK093225 AX747999 BC032832 NM_031952	18656	-	TSC_hg19_v1_chr5_+_95067066 BC047884 NM_014899 BC020231 BC013169 BC041337 AB020685 AK290034	66838	+	TSC_hg19_v1_chr5_+_95067531 CU691986 AB385392	67506	+	NM_001131066|RFESD|317671|Rieske (Fe-S) domain containing##BC048979|RFESD|317671|Rieske (Fe-S) domain containing##NM_001131065|RFESD|317671|Rieske (Fe-S) domain containing##NM_173362|RFESD|317671|Rieske (Fe-S) domain containing##BC035110|RFESD|317671|Rieske (Fe-S) domain containing##JF810884|GPR150|285601|G protein-coupled receptor 150##NM_199243|GPR150|285601|G protein-coupled receptor 150##AK303855|ARSK|153642|arylsulfatase family, member K##AK316253|ARSK|153642|arylsulfatase family, member K##NM_198150|ARSK|153642|arylsulfatase family, member K##AY358596|ARSK|153642|arylsulfatase family, member K##BC050392|ARSK|153642|arylsulfatase family, member K##BC130329|ARSK|153642|arylsulfatase family, member K##BC144160|ARSK|153642|arylsulfatase family, member K##BC144161|ARSK|153642|arylsulfatase family, member K##BC036047|ARSK|153642|arylsulfatase family, member K##AY875939|ARSK|153642|arylsulfatase family, member K##HQ258292|ARSK|153642|arylsulfatase family, member K##AY027526|SPATA9|83890|spermatogenesis associated 9##AK292338|SPATA9|83890|spermatogenesis associated 9##AK310260|SPATA9|83890|spermatogenesis associated 9##BC047333|SPATA9|83890|spermatogenesis associated 9##AK093225|SPATA9|83890|spermatogenesis associated 9##BC032832|SPATA9|83890|spermatogenesis associated 9##NM_031952|SPATA9|83890|spermatogenesis associated 9##BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3##NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3##BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3##BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3##BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3##AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3##AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3	0.049458	
chr1	206831941	206832071	reg1013424.p2	9.395	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-22896	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	-23162	+	TSC_hg19_v1_chr1_-_206785905 NM_001201478 NM_006893	-46123	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	26465	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	113873	-	AY040367 NM_153758 AB463800	140220	+	BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001201478|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_006893|EIF2D|1939|eukaryotic translation initiation factor 2D##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19	0.833291	CTCF.p2:-9:0.833
chr16	5666221	5666352	reg1013404.p1	9.395	+	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	-518518	-	NM_019109 TSC_hg19_v1_chr16_+_5121825 AK075373 BC031095 AB019038 BC004402 AK311475 CU678708 DQ895010 EU176309	-544456	+	TSC_hg19_v1_chr16_-_5116030 BC033681 AY358483 NM_001098514 NM_152459	-550199	-	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	402939	+	TSC_hg19_v1_chr16_+_6533765 BC033885	867489	+	AK001027 NM_001142334	1157523	+	BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##NM_019109|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK075373|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC031095|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AB019038|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC004402|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK311475|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##DQ895010|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##EU176309|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC033681|C16orf89|146556|chromosome 16 open reading frame 89##AY358483|C16orf89|146556|chromosome 16 open reading frame 89##NM_001098514|C16orf89|146556|chromosome 16 open reading frame 89##NM_152459|C16orf89|146556|chromosome 16 open reading frame 89##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	0.824486	CTCF.p2:11:0.824
chr5	22214322	22214438	reg1015296.p1	9.395	+	TSC_hg19_v1_chr5_-_22212879 AK314800	-1499	-	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	-754732	+	TSC_hg19_v1_chr5_+_21459621 AK290693	-754771	+	BC047608 TSC_hg19_v1_chr5_-_22853454	639066	-	L33477 NM_004061	639350	-	DQ388610 NM_020227 AK301776	1293363	+	AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9	0.407338	CTCF.p2:12:0.387
chr10	117114821	117114957	reg1014855.p1	9.394	+	TSC_hg19_v1_chr10_+_116853123 BC029592 BC035157 NM_207303 BC139916 BC139923 BC047716	-261741	+	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	-416926	+	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	-533340	+	AB590245 DQ892210 DQ895406 AF042080 U95847 U97144 BC014962 NM_145793	916791	-	AK292886 NM_001145453	917867	-	AF038421 NM_005264 TSC_hg19_v1_chr10_-_118033147	918179	-	BC029592|ATRNL1|26033|attractin-like 1##BC035157|ATRNL1|26033|attractin-like 1##NM_207303|ATRNL1|26033|attractin-like 1##BC139916|ATRNL1|26033|attractin-like 1##BC139923|ATRNL1|26033|attractin-like 1##BC047716|ATRNL1|26033|attractin-like 1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##DQ892210|GFRA1|2674|GDNF family receptor alpha 1##DQ895406|GFRA1|2674|GDNF family receptor alpha 1##AF042080|GFRA1|2674|GDNF family receptor alpha 1##U95847|GFRA1|2674|GDNF family receptor alpha 1##U97144|GFRA1|2674|GDNF family receptor alpha 1##BC014962|GFRA1|2674|GDNF family receptor alpha 1##NM_145793|GFRA1|2674|GDNF family receptor alpha 1##AK292886|GFRA1|2674|GDNF family receptor alpha 1##NM_001145453|GFRA1|2674|GDNF family receptor alpha 1##AF038421|GFRA1|2674|GDNF family receptor alpha 1##NM_005264|GFRA1|2674|GDNF family receptor alpha 1	0.299947	CTCF.p2:-18:0.300
chr14	107074563	107074688	reg1012188.p1	9.394	+	AB063741 AY393018 AF062170 AY393124 Z47215 AK126281 TSC_hg19_v1_chr14_-_107066261	-8461	-	AF028099 AF460754 DQ454615 DQ523869 GQ232779 GQ232881 GU552765 FJ873979 FJ873984 FJ874049 FJ874062 FJ874084 DQ454628 AY003743 AY003830 DQ523889 DQ523867 DQ454655 DQ523892 DQ523925 FJ840112 FJ840322 FJ873963 DQ454805 DQ523873 FJ840063 FJ840064 FJ840091 FJ840093 FJ840096 FJ840098 FJ840147 FJ840240 FJ840275 FJ840277 FJ840278 FJ840279 FJ840280 FJ840281 FJ840282 FJ840283 FJ840285 FJ840286 FJ840288 FJ840289 FJ840290 FJ840291 FJ840294 FJ840296 FJ840298 FJ840299 FJ840300 FJ840301 FJ840303 FJ873817 FJ873838 FJ873840 FJ873886 FJ873926 FJ873934 FJ874029 FJ874031 FJ874050 FJ874058 AJ008233 DQ523926 AY003838 AY003851 EF175410 EF091918 EU667609 JF810270 EU099077 EU099148 AF103213 AJ010335 AM183984 DQ097899 HM774214 EF555586 AF062229 FJ385338 FJ385339 FJ385347 GQ504915 GQ504957 HM774086 HM774115 HM774155 HM774774 EU146321 S73143 U85229 AY062306 AF035787 AF035788 DQ100793 DQ100813 AY941912 DQ187711 DQ524134 DQ926275 HM995353 HM995355 HM995441 HM995442 HM995443 HM995444 HM995445 HM995446 HM995470 HM995471 HM995475 HM995476 HM996019 HM996347 DQ187673 DQ322745 DQ322877 DQ322968 DQ322969 DQ322970 DQ322971 DQ322972 U00540 AB373623 AY530312 AY530316 AY686913 AY941884 AY986398 DQ100978 DQ926080 DQ926111 DQ926299 DQ926303 DQ926575 DQ926577 DQ926583 DQ926598 AB066888 AB067000 AB363089 AB363160 AB373617 AB373626 AF006517 AF006525 AF035042 AF174059 AF471510 AF471512 AF471528 AF471529 AF471530 AJ389169 AJ488540 AJ556641 AJ579109 AJ579266 AY640512 AY686909 AY941887 AY941891 AY941915 DQ535286 DQ535377 DQ535410 DQ926146 DQ926152 DQ926467 EF177944 EF177957 EF178005 EF178011 EF178016 EF178078 EF178107 FJ195522 FJ773245 FJ773246 GU570355 HM152495 HM152503 HM152507 HM451460 S76131 U00490 U00498 U00567 X62958 X64243 X77472 X99353 Z33902 Z33904 Z96964 M18520 M18521 HM995907 AY393055 AF062122 AJ548507 AY190822 X81724 X81730 X81735 L08085 BC072419 X61011 AK092785 AX747729 TSC_hg19_v1_chr14_-_107049194	-25680	-	AF267786 AF460742 AF460743 DQ454547 DQ454549 DQ454453 DQ454546 DQ454587 DQ454772 DQ523855 DQ454644 GU552737 DQ454456 DQ454588 DQ454927 EU433863 DQ454420 DQ454430 DQ454879 DQ454417 DQ454704 DQ454916 DQ454924 DQ454969 GU552772 DQ454423 DQ455004 EU099273 GU552771 DQ454935 DQ523903 DQ454770 DQ454843 FJ840010 FJ840025 FJ840144 FJ840161 FJ840267 FJ840276 FJ840292 FJ840293 FJ840346 FJ840350 FJ840358 FJ840360 FJ840363 FJ873816 FJ873820 FJ873848 FJ873865 FJ873868 FJ873928 FJ873940 FJ873954 FJ873964 FJ873985 FJ874015 FJ874045 FJ874091 GQ232837 HM116178 HM116213 HM116223 AJ008166 EU433880 GQ232769 GQ232840 GQ232959 EF175426 FJ694889 EF441751 EF441753 AY998718 U44492 U44503 U44504 U44505 AF017462 AJ008170 AJ008172 AJ008178 AJ008203 AJ487495 AJ230634 AJ230635 AJ230636 AJ230637 AJ230638 AJ230640 AJ230641 AJ230642 AJ230643 AJ230644 AJ230646 AJ230649 AJ230652 AJ230655 AJ230656 AJ230657 M34028 AY577299 S73611 S73613 FJ385326 GQ232913 GQ232958 GU552732 GU552750 AM279543 AF085655 AF085656 EU099270 AM233802 AM233804 EU099059 EU099279 EU099288 GQ232907 AF209895 AF209899 AF211932 AF343357 AF343358 AF343374 AF343390 AF343395 AF343401 AF343405 AF343419 AF343420 U86784 AJ862553 AJ862555 AJ862556 AJ862558 AJ862559 AJ862560 AJ862561 AJ862562 AJ862563 AJ862564 AJ862566 AJ862569 AJ862573 AM233783 AM233785 AM233805 AM233806 AM233807 AM233841 AY062302 HM774009 HM996214 AF103038 EU099234 HM773977 HM774742 AY062301 HM773976 HM774100 HM774513 HM774833 HM775004 HQ704065 HQ704066 HQ704067 HQ704068 AF103039 HM774204 HM774915 JN110745 JN110851 JN111173 JN111174 JN111195 JN111203 JN111206 JN111213 L04327 L04331 FJ385346 FJ385432 HM774001 HM774101 HM774244 HM774256 HM774288 HM774294 HM774334 HM774417 HM774549 HM774581 HM774591 HM774745 HM774776 HM774778 HM774796 HM774808 HM774855 HM774958 HM774983 HQ704004 HQ704052 HM775063 Z46853 AF103177 DQ524149 EU146312 EU146344 EU146346 EU146382 AB067195 AF103056 AY393315 AY393569 AY393571 EU099233 AF306373 AJ580927 AY062322 AY376089 U70236 AY393249 AY393314 AY393316 AY393318 AY393319 AY393320 AY393321 AY393455 AY393456 AY393457 AY393458 AY393459 AY393463 AY393466 AY393471 AY393566 AY393567 AY393568 AY393570 AY393572 AY393573 EU099231 EU099232 M34022 U00574 AF110479 AY062303 DQ926264 DQ926266 DQ926273 AF129750 AM233827 AM233828 AM233830 AM233831 AM233832 AM233833 AM233836 AM233838 AY640515 AB066833 AY941987 DQ168569 HM996472 HQ378399 AF021959 AJ239373 AJ272398 AJ555263 AY685303 DQ100803 DQ490742 DQ523920 DQ523934 DQ523971 DQ524022 DQ524049 DQ524147 DQ524150 DQ524160 DQ926054 GU570396 GU570398 HM995095 HM995420 HM995456 HM995460 HM995529 HM995571 HM995573 HM995577 HM995607 HM995969 HM996171 HM996234 HM996245 HM996273 HM996421 HM996528 HM996547 HQ378338 U77555 X94019 X94043 Z46759 HM995213 AB063835 AB063897 AB063925 AB066826 AB066832 AB066935 AB067154 AB067157 AB067159 AB067175 AB067326 AB067330 AB067334 AB067392 AB245095 AF174110 AF394197 AM279622 AY640502 AY640546 AY941916 AY941923 AY941958 AY971039 AY971068 AY971072 AY971073 AY971085 AY971113 AY971118 AY971121 AY971122 DQ100861 DQ100955 DQ100988 DQ490743 DQ926034 DQ926082 DQ926086 DQ926177 DQ926233 DQ926269 DQ926292 DQ926295 DQ926339 DQ926351 DQ926360 DQ926597 DQ926609 DQ926637 DQ926643 DQ926654 EU794427 EU794430 EU794443 FJ385310 FJ385369 GU570400 GU570406 HQ378329 HQ378361 HQ378384 X61649 AB063926 AB066971 AB066985 AB067015 AB067070 AB067074 AB067100 AB067116 AB067125 AB067129 AB067241 AF062125 AF062157 AF078940 AF078941 AF099197 AF110480 AF110484 AF110486 AF110487 AF174068 AF442760 AJ002767 AJ002771 AJ002772 AJ002773 AJ002774 AJ002775 AJ006165 AJ249378 AJ249636 AJ276099 AJ399826 AJ414007 AJ491906 AJ491907 AJ491913 AJ491914 AJ555254 AY033242 AY033243 AY033250 AY033274 AY033275 AY033276 AY033281 AY033282 AY033286 AY033288 AY640520 AY781870 AY941877 AY941878 AY941879 AY941919 AY941920 AY941921 AY971098 DQ065619 DQ065621 DQ065625 DQ065655 DQ065657 DQ065658 DQ205181 DQ379476 DQ490737 DQ490744 DQ926149 DQ926201 DQ926390 DQ926391 DQ926462 DQ926465 DQ926503 DQ926525 DQ926533 DQ926560 HM152490 HQ378409 L12198 L26537 U22381 U44493 U77538 U77539 U77541 U77544 U77547 U77548 U77549 U77550 U77551 U77552 U77553 U77557 U77558 U77559 U77560 U77561 U77562 U77563 U77564 U77565 U77566 U77567 X87447 X94002 X94004 X94005 X94006 X94028 X94029 X94030 X94031 X94032 X94038 X94039 X94041 X94044 X94045 X94046 X94048 X94050 X94051 X94052 X94053 X94055 X94058 X94059 X94061 X94062 X94063 X94066 X94071 X94072 X94073 X94077 Z46760 Z97037 DQ535275 DQ535319 DQ535340 DQ535347 DQ535361 DQ535401 DQ535430 DQ535447 DQ535450 DQ535454 DQ535458 DQ926623 EF177983 EF177986 EF178042 EF178049 EF178067 EF178105 FJ195497 FJ195499 FJ195517 FJ195521 FJ195527 FJ195537 JN252502 Z26829 Z26830 Z26832 Z26833 Z26839 Z26842 Z26843 Z26844 HM995790 HM995656 HM995886 M27125 U77535 U77543 U77554 U77556 AY393198 AY393202 HM995637 HM995880 AY392957 AY392958 AY392962 AY392964 AY392965 AY392966 AY392968 AY392969 AY392970 AY392976 AY392978 AY392980 AY392984 AY393084 AY393086 AY393087 AY393088 AY393090 AY393092 AY393094 AY393096 AY393097 AY393185 AY393186 AY393187 AY393188 AY393189 AY393191 AY393192 AY393193 AY393194 AY393195 AY393196 AY393197 AY393199 AY393200 AY393201 AY393203 AY393204 AF085657 AF085658 AF085659 AM233808 AF052379 AF062154 AF062214 AF348829 AF348830 AF348831 AF348832 AF348833 AF348834 AJ131060 AM233779 AM233780 AM233803 AM233834 AM233839 AY190828 L03679 X65912 X65913 X65914 X65915 Z47219 Z47225 X58402 BC014258 X58401 X58400 X58397 BC089417 BC078670 TSC_hg19_v1_chr14_-_107035221	-39634	-	DQ454429 DQ454922 HM116180 EF091913 EF175413 GQ232868 GQ232976 EF583666 EF407827 EF407822 AJ007320 AF308556 AF103132 HM774392 HQ703981 JN110710 JN111102 HM774550 AY393601 AY393649 AY393679 EU099114 EU099216 DQ100711 AB066834 AF174037 AY050706 DQ005304 FJ492918 HM994925 HQ689790 Z80842 DQ524125 DQ535395 HQ378413 DQ100675 HM996225 AB067078 AY866569 AY971062 DQ065681 DQ926239 EF028212 HM994895 HM994932 HM994933 HM994938 HM994946 HM994963 HM994965 HM995218 HM995258 HM995267 HM995314 HM996512 HM996546 AF021955 GU570262 AF062174 AF062225 AF062279 TSC_hg19_v1_chr14_-_107078867	4100	-	AF460776 EF583680 DQ454729 DQ454436 HM995491 DQ454495 DQ454638 DQ454782 DQ523857 DQ454730 DQ454735 DQ454736 DQ454850 DQ454463 DQ454626 DQ454634 DQ454779 AY003758 DQ454909 AY003782 DQ454387 DQ454439 DQ454443 DQ454491 DQ454630 DQ454640 DQ454657 DQ454658 DQ454693 DQ454996 DQ523865 DQ523866 DQ523904 DQ523907 GU552723 GU552763 DQ454683 DQ454954 AY003756 AY003861 DQ454803 DQ454883 DQ454908 DQ454931 DQ454981 Z30558 Z30559 Z30575 Z30577 Z30579 Z30673 DQ454894 HM995480 DQ454567 DQ454586 DQ454595 DQ454611 DQ454623 DQ454649 DQ454661 DQ454790 DQ454858 DQ454930 DQ454940 DQ523860 M18514 AY003863 AY003854 DQ454390 DQ454444 DQ454650 DQ454684 DQ454709 DQ454717 DQ454721 DQ454733 DQ454737 DQ454855 DQ454887 DQ454933 DQ454936 DQ454963 DQ454984 DQ454994 DQ523863 DQ454447 DQ454504 DQ454539 DQ454596 DQ454609 DQ454613 DQ454619 DQ454633 DQ454656 DQ454672 DQ454720 DQ454886 DQ454942 DQ454972 DQ454977 HM116187 DQ454605 DQ454646 DQ454702 DQ454703 DQ454851 HM116123 HM116135 HM116139 HM116144 HM116147 HM116154 HM116217 AY003860 DQ454602 DQ454880 DQ454822 DQ454825 EF091925 EF175400 EF175422 EF175440 EF583671 EU667610 EU814956 GQ232848 GQ232850 GQ232880 DQ454435 EU099241 EU099155 EU099196 AY577297 AY393172 DQ523932 DQ524057 EU099215 EU099224 AM183980 AY393168 AY393171 AY393176 AY393177 AY393178 AM279541 AF103075 AF103349 AF103054 AY180386 AF103162 FJ385403 JN110682 JN110887 AF103140 FJ385332 FJ385336 FJ385376 FJ385404 FJ385416 FJ385417 FJ385421 GQ504863 L26904 AF103343 AF103091 EU620035 AF103271 EU146313 U00585 EU620063 DQ926547 AY062314 U00553 U00557 AF103164 AF103228 DQ005270 HM995488 AY671631 HM996467 AJ245067 DQ523945 DQ523951 DQ523954 DQ523969 DQ523970 DQ523977 DQ523979 DQ524002 DQ524011 DQ524015 DQ524019 DQ524040 DQ524042 DQ524043 DQ524052 DQ524055 DQ524072 DQ524087 DQ524090 DQ524092 DQ524099 DQ524100 DQ524104 DQ524108 DQ524110 DQ524124 DQ524133 AM233755 DQ926051 DQ926252 AB067262 AJ300799 AY671719 AY941873 AY944692 AY944703 AY944704 AY944722 DQ005289 DQ005293 DQ005305 EF178085 FJ385391 HM995323 HM995324 HM995327 HM995330 HM995345 HM995347 HM995388 HM995403 HM995478 HM995483 HM995484 HM995485 HM995486 HM995487 HM995498 HM995499 HM995500 HM995502 HM995534 HM995551 HM995556 HM995557 HM995559 HM995560 HM995932 HM995933 HM995957 HM995994 HM996010 HM996122 HM996155 HM996464 HM996496 AB063721 AB063723 AB063729 AB063744 AB063787 AB063920 AB066903 AB066912 AB066913 AB067270 AB067272 AB067275 AB067296 AF021963 AF035041 AF062230 AF174018 AF174072 AF174080 AF174097 AF174119 AJ006351 AJ239343 AJ244983 AJ245027 AJ413991 AJ413998 AJ413999 AJ574780 AM279612 AY345917 AY640510 AY670733 AY670744 AY670820 AY670910 AY670915 AY670930 AY670942 AY670967 AY670984 AY671004 AY671056 AY671062 AY671072 AY671075 AY671076 AY671082 AY671085 AY671088 AY671194 AY671221 AY671255 AY671326 AY671337 AY671343 AY671346 AY671353 AY671356 AY671359 AY671373 AY671376 AY671378 AY671394 AY671456 AY671457 AY671458 AY671459 AY671460 AY671463 AY671467 AY671470 AY671472 AY671473 AY671476 AY671485 AY671488 AY671493 AY671494 AY671575 AY671588 AY671589 AY671601 AY671606 AY671628 AY671645 AY671666 AY671667 AY671674 AY671692 AY671710 AY671715 AY671717 AY671759 AY866865 AY986386 AY986387 AY986388 AY986389 AY986390 DQ005263 DQ005287 DQ005288 DQ100795 DQ328873 DQ431484 DQ431485 DQ926085 DQ926130 DQ926178 DQ926219 DQ926256 DQ926258 DQ926290 DQ926310 DQ926368 DQ926395 DQ926514 DQ926572 DQ926640 DQ926644 EU794431 FJ385318 FJ456850 GU570380 GU570382 HQ378396 HQ689744 JF806450 L12189 L12197 L23516 L23517 L23563 S73508 U00486 U00493 U31937 U43927 U51549 U95241 U96283 X98749 Z70613 Z70615 Z70628 Z70629 Z70651 Z70652 Z70653 Z70658 Z74672 Z74674 Z74681 Z74682 Z74683 Z74684 Z74685 Z74686 Z74687 Z74688 Z74689 Z74690 DQ926105 AY686879 AY944715 DQ535399 DQ535425 DQ535434 DQ535441 DQ535468 DQ535469 DQ535474 EF177985 EF178038 EF178125 HM996104 HM996425 HM996431 HM996435 Z14199 Z75403 AY392942 AY393076 AY393081 AY393082 Z47242 AY671167 AF062106 AF062108 AF062109 AF062126 AF062129 AF062132 AF062144 AF062166 AF062185 AF062209 AF062228 AF062252 AF062266 AY671032 AY671186 AY671196 AY671241 AY671258 AY671290 AY671296 M88500 S46247 U44791 U86525 X52111 Z11958 Z47349 Z75395 M18518 BC066594 S50735 TSC_hg19_v1_chr14_-_107083721 AK097365 X67906 X69860 X69866 AK097362 BX248300 AK125079	8952	-	S76904 AM279575 EU619960 JN110911 JN111008 HM774600 HM774602 AF103144 AF103285 AY866748 AY866803 DQ187673 DQ187733 DQ322974 DQ840851 DQ840858 DQ840864 AF006522 AF233250 AF471440 EF177980 EU835549 AB063812 AJ399808 AJ579268 DQ205169 DQ535364 DQ535448 DQ926460 Z98683 Z98702 AJ519260 AJ519262 AJ519304 AY392915 AF062171 TSC_hg19_v1_chr14_-_107099662 AK097355 AK097366 AK093636 AK097572 AX748235	24898	-	AK126281|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC072419|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC014258|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089417|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC078670|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC066594|IGH@|3492|immunoglobulin heavy locus##AK097365|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097362|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125079|IGH@|3492|immunoglobulin heavy locus##AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK097366|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)	2.748951	CTCF.p2:-8:0.973	CTCF.p2:-46:0.781	CTCF.p2:68:0.995
chr10	18161724	18161866	reg1015284.p1	9.393	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	-63402	+	NM_001098844 BC157856	-120574	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	-310392	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	79034	+	NM_201593 NM_201596 NM_201597 S60415 BC136409 AF137376 AF423191 AY393860 AY675091 AK296471 AK311694 AK307526 NM_001167945 NM_201571 NM_201572 AK293837	267912	+	NM_000724 AB208917 U95019	387845	+	J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	0.896514	CTCF.p2:26:0.897
chr3	5068657	5068780	reg1012275.p2	9.393	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-47364	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	-47537	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	-47602	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	95237	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	95373	+	TSC_hg19_v1_chr3_+_5229344 AK298511	160609	+	AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	0.909103	CTCF.p2:19:0.909
chr13	78711920	78712039	reg1012701.p1	9.392	+	D90402 NM_000115 S57283 AF308156	-162263	-	AF114165 NM_001201397	-218077	-	AF114163 AF114164 TSC_hg19_v1_chr13_-_78493569	-218428	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	458303	+	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	465744	-	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	521314	-	D90402|EDNRB|1910|endothelin receptor type B##NM_000115|EDNRB|1910|endothelin receptor type B##S57283|EDNRB|1910|endothelin receptor type B##AF114165|EDNRB|1910|endothelin receptor type B##NM_001201397|EDNRB|1910|endothelin receptor type B##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219	0.999096	CTCF.p2:-12:0.999
chr16	10274670	10274775	reg1001304.p1	9.392	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-1089119	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-1089182	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-1217427	-	BC143273 U09002 NM_001134408	1111	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	1466	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	1955	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.989194	CTCF.p2:10:0.989
chr1	211688880	211689014	reg1011619.p1	9.390	+	AY191519 NM_001164688 NM_183059	-22689	-	TSC_hg19_v1_chr1_+_211556168 BC005997	-132779	+	TSC_hg19_v1_chr1_+_211556144 AK130858	-132800	+	AF364518 TSC_hg19_v1_chr1_-_211751805	62815	-	AB451467 TSC_hg19_v1_chr1_-_211752048	63053	-	TSC_hg19_v1_chr1_-_211752056 BC121015 BC121016 NM_021194	63141	-	AY191519|RD3|343035|retinal degeneration 3##NM_001164688|RD3|343035|retinal degeneration 3##NM_183059|RD3|343035|retinal degeneration 3##BC005997|LINC00467|84791|long intergenic non-protein coding RNA 467##AK130858|LINC00467|84791|long intergenic non-protein coding RNA 467##AF364518|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121015|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121016|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##NM_021194|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1	0.970245	CTCF.p2:-7:0.970
chr7	120721495	120721631	reg1015732.p1	9.390	+	AK025639 AK225313 TSC_hg19_v1_chr7_+_120702920	-18690	+	NM_001105533	-92119	+	TSC_hg19_v1_chr7_+_120628867 AL832638	-92667	+	AF152584 NM_016087	243857	+	AF169963 NM_057168	247526	+	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	314774	-	AK025639|C7orf58|79974|chromosome 7 open reading frame 58##AK225313|C7orf58|79974|chromosome 7 open reading frame 58##NM_001105533|C7orf58|79974|chromosome 7 open reading frame 58##AL832638|C7orf58|79974|chromosome 7 open reading frame 58##AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C	0.462609	CTCF.p2:7:0.463
chr11	107420117	107420243	reg1013956.p1	9.389	+	AK293001 TSC_hg19_v1_chr11_-_107328552 BX649022 BX647832 BC107418 BC070142 BX648704 AK126881 NM_152434	-91641	-	BC085622 TSC_hg19_v1_chr11_-_106889260 BC130484 BC130488 BC144033 NM_000855 X63282 Z50053	-531092	-	NM_152433 NM_198439	-1471716	-	AK293603 TSC_hg19_v1_chr11_-_107436464 BC015183 AK304413 AB218768 AK095523 NM_138775	16264	-	TSC_hg19_v1_chr11_+_107461813 AK297351 NM_001130037 NM_018712	41631	+	TSC_hg19_v1_chr11_+_107461998 AK303689 AK054794	41805	+	AK293001|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX649022|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX647832|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC107418|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC070142|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX648704|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK126881|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##NM_152434|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC130484|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC130488|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC144033|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_000855|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##X63282|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##Z50053|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_152433|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##NM_198439|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##AK293603|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##BC015183|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK304413|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AB218768|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK095523|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##NM_138775|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK303689|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK054794|ELMOD1|55531|ELMO/CED-12 domain containing 1	0.998471	CTCF.p2:-14:0.998
chr13	103233051	103233172	reg1013377.p1	9.389	+	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	-179036	-	NM_004115 U66200	-664117	-	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	-1128116	+	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	16225	+	HQ258371 NM_001010977 BC132748 BC132750	113747	-	NM_001146197	178310	-	BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_004115|FGF14|2259|fibroblast growth factor 14##U66200|FGF14|2259|fibroblast growth factor 14##AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II##HQ258371|METTL21C|196541|methyltransferase like 21C##NM_001010977|METTL21C|196541|methyltransferase like 21C##BC132748|METTL21C|196541|methyltransferase like 21C##BC132750|METTL21C|196541|methyltransferase like 21C##NM_001146197|CCDC168|643677|coiled-coil domain containing 168	0.998142	CTCF.p2:-3:0.998
chr15	83518515	83518627	reg1012730.p1	9.389	+	TSC_hg19_v1_chr15_+_83478391 AK126887 AB075851	-40200	+	NM_001080435	-40599	+	BC130569 BC144175 BC144181 NM_001007122 AK122875 AL833295	-43759	-	AF081530 TSC_hg19_v1_chr15_-_83621443 AK292772 BC012109 NM_004839 NM_199330	102851	-	TSC_hg19_v1_chr15_-_83654854 AK097109	136288	-	NM_031452 TSC_hg19_v1_chr15_+_83654965 BC112329 AK027095 BC003627 BC027181	136407	+	AK126887|WHAMM|123720|WAS protein homolog associated with actin, golgi membranes and microtubules##AB075851|WHAMM|123720|WAS protein homolog associated with actin, golgi membranes and microtubules##NM_001080435|WHAMM|123720|WAS protein homolog associated with actin, golgi membranes and microtubules##BC130569|FSD2|123722|fibronectin type III and SPRY domain containing 2##BC144175|FSD2|123722|fibronectin type III and SPRY domain containing 2##BC144181|FSD2|123722|fibronectin type III and SPRY domain containing 2##NM_001007122|FSD2|123722|fibronectin type III and SPRY domain containing 2##AK122875|FSD2|123722|fibronectin type III and SPRY domain containing 2##AL833295|FSD2|123722|fibronectin type III and SPRY domain containing 2##AF081530|HOMER2|9455|homer homolog 2 (Drosophila)##AK292772|HOMER2|9455|homer homolog 2 (Drosophila)##BC012109|HOMER2|9455|homer homolog 2 (Drosophila)##NM_004839|HOMER2|9455|homer homolog 2 (Drosophila)##NM_199330|HOMER2|9455|homer homolog 2 (Drosophila)##AK097109|LOC100131860|100131860|uncharacterized LOC100131860##NM_031452|FAM103A1|83640|family with sequence similarity 103, member A1##BC112329|FAM103A1|83640|family with sequence similarity 103, member A1##AK027095|FAM103A1|83640|family with sequence similarity 103, member A1##BC003627|FAM103A1|83640|family with sequence similarity 103, member A1##BC027181|FAM103A1|83640|family with sequence similarity 103, member A1	0.449228	CTCF.p2:-3:0.417
chr5	58676410	58676552	reg1011864.p2	9.389	+	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	-23738	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	-104551	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	-341103	-	U50159 NM_006203 L20970	205818	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	387867	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	387974	-	AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.979725	CTCF.p2:0:0.980
chr1	19233558	19233691	reg1009807.p1	9.388	+	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-4470	-	AK294552 NM_001161504	-16240	-	NM_152232 AB527225	-47469	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	49175	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	303122	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	344368	-	DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##NM_001136265|IFFO2|126917|intermediate filament family orphan 2##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090	0.995352	CTCF.p2:-11:0.995
chr11	74855618	74855723	reg1013484.p2	9.387	+	NM_001005285 BC136958 BC136959	-54893	-	TSC_hg19_v1_chr11_+_74699955 NM_006656 AK022450 AK290442 AK303540	-155706	+	TSC_hg19_v1_chr11_+_74660321 BC064957 BC106066 AB587348 CU687980 D14658	-195330	+	NM_001145212 NM_007256 FM209050 TSC_hg19_v1_chr11_+_74862151 AK304783 AK302492 AK290234 AK300134 AB020687 BC127254 BC041095 AB026256 AL117465	6474	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	15171	+	NM_001195528	96279	+	NM_001005285|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##BC136958|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##BC136959|OR2AT4|341152|olfactory receptor, family 2, subfamily AT, member 4##NM_006656|NEU3|10825|sialidase 3 (membrane sialidase)##AK022450|NEU3|10825|sialidase 3 (membrane sialidase)##AK290442|NEU3|10825|sialidase 3 (membrane sialidase)##AK303540|NEU3|10825|sialidase 3 (membrane sialidase)##BC064957|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##BC106066|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##D14658|SPCS2|9789|signal peptidase complex subunit 2 homolog (S. cerevisiae)##NM_001145212|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_007256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209050|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK304783|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK302492|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK290234|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK300134|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB020687|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC127254|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC041095|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB026256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AL117465|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050	0.920778	CTCF.p2:1:0.921
chr1	57050716	57050819	reg1011382.p1	9.387	+	TSC_hg19_v1_chr1_-_57045237 NM_003713	-5522	-	AK312439 TSC_hg19_v1_chr1_-_57045216	-5550	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	-5637	-	TSC_hg19_v1_chr1_+_57110986 AK314011 NM_006252 U06454 BC069680 BC069740 BC069823 EF056019	60135	+	AK125198 NM_001004303 TSC_hg19_v1_chr1_-_57285379	234606	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	269741	+	NM_003713|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK314011|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_006252|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##U06454|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069680|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069740|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069823|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##EF056019|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##AK125198|C1orf168|199920|chromosome 1 open reading frame 168##NM_001004303|C1orf168|199920|chromosome 1 open reading frame 168##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide	0.962718	CTCF.p2:11:0.963
chr11	26248902	26249021	reg1014144.p1	9.386	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-1730312	+	NM_001195637	-3366990	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-3397616	-	NM_031418 AK302659	104769	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	344779	-	BC049207 NM_178498	494598	-	AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	0.292357	CTCF.p2:15:0.292
chr12	56984133	56984273	reg1013500.p2	9.386	+	TSC_hg19_v1_chr12_+_56915603 NM_002898 BC072679 AK308885 AK293315 AK304540 D28483 AK299580 BC027863 CU693300	-68506	+	AK289471 BC025661 BC036929 AK000467 AF110330 AK303772 AF223944 AK294822 BC119767 BC119768 BC059370 BC048344 NM_013267	-102163	-	NM_207344 TSC_hg19_v1_chr12_+_56862350 AF451989 AK300594 AL832247 BC020844 AK291920 BX647957 AK074733 AF289571	-121851	+	AF000422 TSC_hg19_v1_chr12_-_57006969	22713	-	AK023830 TSC_hg19_v1_chr12_-_57009380	25173	-	AK023842 TSC_hg19_v1_chr12_-_57024088	39839	-	NM_002898|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC072679|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK308885|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK293315|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK304540|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##D28483|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK299580|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC027863|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK289471|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC025661|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC036929|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK000467|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF110330|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK303772|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF223944|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK294822|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119767|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119768|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC059370|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC048344|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_013267|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_207344|SPRYD4|283377|SPRY domain containing 4##AF451989|SPRYD4|283377|SPRY domain containing 4##AK300594|SPRYD4|283377|SPRY domain containing 4##AL832247|SPRYD4|283377|SPRY domain containing 4##BC020844|SPRYD4|283377|SPRY domain containing 4##AK291920|SPRYD4|283377|SPRY domain containing 4##BX647957|SPRYD4|283377|SPRY domain containing 4##AK074733|SPRYD4|283377|SPRY domain containing 4##AF289571|SPRYD4|283377|SPRY domain containing 4##AF000422|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023830|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023842|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A	1.118383	CTCF.p2:11:0.936
chr15	70473774	70473932	reg1013746.p1	9.386	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-83610	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-83626	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-131944	-	TSC_hg19_v1_chr15_-_70878946 BC040579	405091	-	BC016881 AL834243 NM_001008224 AK055435	520774	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	581989	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.013957	
chr16	25119450	25119548	reg1013539.p2	9.386	+	TSC_hg19_v1_chr16_+_25078227 BC023651 AK093382	-41210	+	TSC_hg19_v1_chr16_-_25026691 AK027567 AK291691 BC080195 AK301500 NM_001006634 NM_018054	-92807	-	AJ306731 AJ306732 TSC_hg19_v1_chr16_-_25026604	-92887	-	TSC_hg19_v1_chr16_+_25123062 NM_001032391 NM_016309 AK223364 AF151826 BC001214	3562	+	TSC_hg19_v1_chr16_+_25123102 AK025884 AK225271 AK291885 AK314409 BC014217 AF037601 CU674610 AL137283 CU676933	3698	+	AB013456 AF067797 NM_001169 AK222975 AK222964	108801	+	BC023651|LOC283887|283887|uncharacterized LOC283887##AK093382|LOC283887|283887|uncharacterized LOC283887##AK027567|ARHGAP17|55114|Rho GTPase activating protein 17##AK291691|ARHGAP17|55114|Rho GTPase activating protein 17##BC080195|ARHGAP17|55114|Rho GTPase activating protein 17##AK301500|ARHGAP17|55114|Rho GTPase activating protein 17##NM_001006634|ARHGAP17|55114|Rho GTPase activating protein 17##NM_018054|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306731|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306732|ARHGAP17|55114|Rho GTPase activating protein 17##NM_001032391|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_016309|LCMT1|51451|leucine carboxyl methyltransferase 1##AK223364|LCMT1|51451|leucine carboxyl methyltransferase 1##AF151826|LCMT1|51451|leucine carboxyl methyltransferase 1##BC001214|LCMT1|51451|leucine carboxyl methyltransferase 1##AK025884|LCMT1|51451|leucine carboxyl methyltransferase 1##AK225271|LCMT1|51451|leucine carboxyl methyltransferase 1##AK291885|LCMT1|51451|leucine carboxyl methyltransferase 1##AK314409|LCMT1|51451|leucine carboxyl methyltransferase 1##BC014217|LCMT1|51451|leucine carboxyl methyltransferase 1##AF037601|LCMT1|51451|leucine carboxyl methyltransferase 1##AL137283|LCMT1|51451|leucine carboxyl methyltransferase 1##AB013456|AQP8|343|aquaporin 8##AF067797|AQP8|343|aquaporin 8##NM_001169|AQP8|343|aquaporin 8##AK222975|AQP8|343|aquaporin 8##AK222964|AQP8|343|aquaporin 8	0.978429	CTCF.p2:4:0.966
chr16	2969768	2969915	reg1012467.p1	9.386	+	TSC_hg19_v1_chr16_+_2961994 AB046772	-7844	+	TSC_hg19_v1_chr16_+_2961983 BC028572 NM_020912 NM_032296	-7877	+	NM_001142499 NM_001142500 NM_138439 TSC_hg19_v1_chr16_+_2933215 BC014089	-36585	+	BC009383 NM_001253725 NM_001253726 NM_024507 NM_172229 AK075033 AK301953 AK027669 BC003533 AK223422 AB086355 AB086356 AB086357 AB086405 DQ896447	44527	+	NM_152341 TSC_hg19_v1_chr16_+_3019348	49505	+	TSC_hg19_v1_chr16_+_3019556 AK291373 AK054564 AK092173 AX747391 BC033703 AL832527 EU831903 EU831998 AY424282	49729	+	AB046772|FLYWCH1|84256|FLYWCH-type zinc finger 1##BC028572|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_020912|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_032296|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_001142499|FLYWCH2|114984|FLYWCH family member 2##NM_001142500|FLYWCH2|114984|FLYWCH family member 2##NM_138439|FLYWCH2|114984|FLYWCH family member 2##BC014089|FLYWCH2|114984|FLYWCH family member 2##BC009383|KREMEN2|79412|kringle containing transmembrane protein 2##NM_001253725|KREMEN2|79412|kringle containing transmembrane protein 2##NM_001253726|KREMEN2|79412|kringle containing transmembrane protein 2##NM_024507|KREMEN2|79412|kringle containing transmembrane protein 2##NM_172229|KREMEN2|79412|kringle containing transmembrane protein 2##AK075033|KREMEN2|79412|kringle containing transmembrane protein 2##AK301953|KREMEN2|79412|kringle containing transmembrane protein 2##AK027669|KREMEN2|79412|kringle containing transmembrane protein 2##BC003533|KREMEN2|79412|kringle containing transmembrane protein 2##AK223422|KREMEN2|79412|kringle containing transmembrane protein 2##AB086355|KREMEN2|79412|kringle containing transmembrane protein 2##AB086356|KREMEN2|79412|kringle containing transmembrane protein 2##AB086357|KREMEN2|79412|kringle containing transmembrane protein 2##AB086405|KREMEN2|79412|kringle containing transmembrane protein 2##DQ896447|KREMEN2|79412|kringle containing transmembrane protein 2##NM_152341|PAQR4|124222|progestin and adipoQ receptor family member IV##AK291373|PAQR4|124222|progestin and adipoQ receptor family member IV##AK054564|PAQR4|124222|progestin and adipoQ receptor family member IV##AK092173|PAQR4|124222|progestin and adipoQ receptor family member IV##BC033703|PAQR4|124222|progestin and adipoQ receptor family member IV##AL832527|PAQR4|124222|progestin and adipoQ receptor family member IV##EU831903|PAQR4|124222|progestin and adipoQ receptor family member IV##EU831998|PAQR4|124222|progestin and adipoQ receptor family member IV##AY424282|PAQR4|124222|progestin and adipoQ receptor family member IV	0.994082	CTCF.p2:6:0.994
chr14	61788239	61788419	reg1013573.p1	9.384	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-39807	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-40135	-	TSC_hg19_v1_chr14_-_61747957 AK091169 AX746825	-40364	-	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	198	+	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	373861	+	FJ790247 NM_001243084	376010	+	NM_001017970|TMEM30B|161291|transmembrane protein 30B##AK091169|TMEM30B|161291|transmembrane protein 30B##AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	0.0	
chrX	115028723	115028870	reg1015519.p1	9.384	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-200928	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-231754	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-233190	+	BC003645 TSC_hg19_v1_chrX_-_115085443	56643	-	AK313927 NM_000686 X87723 U16957	273199	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	538971	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.859774	CTCF.p2:-2:0.860
chrX	72003913	72004050	reg1015508.p1	9.384	+	X73878 BC104944 BC143499 BC143501 X73874 NM_001122670 NM_001172436 NM_002637 TSC_hg19_v1_chrX_-_71934110	-70038	-	AK074326 AK296641 NM_001166418 NM_001166419 NM_001166420 NM_001166422 NM_001166448 NM_018486	-211057	-	AB527476 CU690678 EU446822 EU832800 GQ129378 AF245664 AY429539 BC050433 BC011800 BC023642 AK300895 AJ277724 TSC_hg19_v1_chrX_-_71792667 AK294903 AF212246 AK298767	-211317	-	NM_001080851 NM_033053 AB527486 CU688748	60941	+	AB527486 CU688748 NM_001080851 NM_033053	91593	-	NM_001042506 BC041956 BC136492 AB528886	219435	+	X73878|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##BC104944|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##BC143499|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##BC143501|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##X73874|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##NM_001122670|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##NM_001172436|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##NM_002637|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##AK074326|HDAC8|55869|histone deacetylase 8##AK296641|HDAC8|55869|histone deacetylase 8##NM_001166418|HDAC8|55869|histone deacetylase 8##NM_001166419|HDAC8|55869|histone deacetylase 8##NM_001166420|HDAC8|55869|histone deacetylase 8##NM_001166422|HDAC8|55869|histone deacetylase 8##NM_001166448|HDAC8|55869|histone deacetylase 8##NM_018486|HDAC8|55869|histone deacetylase 8##EU446822|HDAC8|55869|histone deacetylase 8##EU832800|HDAC8|55869|histone deacetylase 8##GQ129378|HDAC8|55869|histone deacetylase 8##AF245664|HDAC8|55869|histone deacetylase 8##AY429539|HDAC8|55869|histone deacetylase 8##BC050433|HDAC8|55869|histone deacetylase 8##AK300895|HDAC8|55869|histone deacetylase 8##AJ277724|HDAC8|55869|histone deacetylase 8##AK294903|HDAC8|55869|histone deacetylase 8##AF212246|HDAC8|55869|histone deacetylase 8##AK298767|HDAC8|55869|histone deacetylase 8##NM_001080851|DMRTC1B|728656|DMRT-like family C1B##NM_033053|DMRTC1|63947|DMRT-like family C1##NM_001080851|DMRTC1B|728656|DMRT-like family C1B##NM_033053|DMRTC1|63947|DMRT-like family C1##NM_001042506|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B##BC041956|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B##BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B	0.996036	CTCF.p2:-2:0.996
chr5	115166950	115167091	reg1014877.p1	9.383	+	D85777 Z31357 BC024241 AK130357 AK314231 TSC_hg19_v1_chr5_-_115152355 AK309390 NM_001801	-14657	-	TSC_hg19_v1_chr5_-_114961708 AY304583 AY304584 BC019349 AK075218 AK304210 AK027512 NM_001164468 NM_001164469 NM_181836	-205226	-	TSC_hg19_v1_chr5_-_114961697 AK074962	-205328	-	BC011033 TSC_hg19_v1_chr5_-_115177263 AB017507 AB590693 EU554057 BC012266 AK313320 NM_004707	10384	-	TSC_hg19_v1_chr5_+_115177642 NM_001284 BX647735 U91932 BC000804 D63643 BC012614 X99458 DQ891198 DQ894381 AK311843 BT009833 CR450341	10655	+	AK291655 BC068560 NM_173800 BC060869 AY560010 BC109022 BC109023	131191	+	D85777|CDO1|1036|cysteine dioxygenase, type I##Z31357|CDO1|1036|cysteine dioxygenase, type I##BC024241|CDO1|1036|cysteine dioxygenase, type I##AK130357|CDO1|1036|cysteine dioxygenase, type I##AK314231|CDO1|1036|cysteine dioxygenase, type I##NM_001801|CDO1|1036|cysteine dioxygenase, type I##AY304583|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AY304584|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##BC019349|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK075218|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AK304210|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK027512|TMED7|51014|transmembrane emp24 protein transport domain containing 7##NM_001164468|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_001164469|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_181836|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK074962|TMED7|51014|transmembrane emp24 protein transport domain containing 7##BC011033|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##AB017507|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##EU554057|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##BC012266|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##AK313320|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##NM_004707|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##NM_001284|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BX647735|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##U91932|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC000804|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##D63643|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC012614|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##X99458|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ891198|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ894381|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##AK311843|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BT009833|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##CR450341|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##AK291655|AQPEP|206338|laeverin##BC068560|AQPEP|206338|laeverin##NM_173800|AQPEP|206338|laeverin##BC060869|AQPEP|206338|laeverin##AY560010|AQPEP|206338|laeverin##BC109022|AQPEP|206338|laeverin##BC109023|AQPEP|206338|laeverin	0.996269	CTCF.p2:23:0.996
chr3	127678836	127678958	reg1010126.p1	9.382	+	NM_207335 AB590042 AM393308 AM393457	-36995	+	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	-44579	+	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	-136755	-	TSC_hg19_v1_chr3_+_127771248 AK027423 AK074706 NM_013336	92290	+	TSC_hg19_v1_chr3_+_127771300 AL832821 BC002951 AF077032 AF084458	92399	+	TSC_hg19_v1_chr3_+_127771307 AF346602	92425	+	NM_207335|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393308|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393457|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK027423|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AK074706|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##NM_013336|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AL832821|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##BC002951|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF077032|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF084458|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	0.893992	CTCF.p2:27:0.894
chr10	101320397	101320549	reg1013906.p1	9.381	+	NM_145285 BC025788 AK313485 AK300856	-27760	+	AK301916 AB587385 AY513279 M37400 AF052153 BC000498 AK312684 TSC_hg19_v1_chr10_-_101190382 AK293483 AK309174 NM_002079	-130107	-	TSC_hg19_v1_chr10_+_101089114 AK308618	-231347	+	TSC_hg19_v1_chr10_-_101380086 AF327403 AJ303078 AF327402 AJ303077 BC058937	59634	-	BC076399 TSC_hg19_v1_chr10_-_101380197 BC047312	59707	-	TSC_hg19_v1_chr10_-_101380229 NM_031212	59750	-	NM_145285|NKX2-3|159296|NK2 homeobox 3##BC025788|NKX2-3|159296|NK2 homeobox 3##AK313485|NKX2-3|159296|NK2 homeobox 3##AK300856|NKX2-3|159296|NK2 homeobox 3##AK301916|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AY513279|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##M37400|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AF052153|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##BC000498|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK312684|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK293483|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK309174|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##NM_002079|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK308618|CNNM1|26507|cyclin M1##AF327403|SLC25A28|81894|solute carrier family 25, member 28##AJ303078|SLC25A28|81894|solute carrier family 25, member 28##AF327402|SLC25A28|81894|solute carrier family 25, member 28##AJ303077|SLC25A28|81894|solute carrier family 25, member 28##BC058937|SLC25A28|81894|solute carrier family 25, member 28##BC076399|SLC25A28|81894|solute carrier family 25, member 28##BC047312|SLC25A28|81894|solute carrier family 25, member 28##NM_031212|SLC25A28|81894|solute carrier family 25, member 28	0.994509	CTCF.p2:2:0.995
chr3	172384711	172384858	reg1015718.p1	9.381	+	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	-143606	-	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	-218561	-	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-626447	+	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	44106	-	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	83740	+	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	87518	+	AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene	0.849391	CTCF.p2:19:0.849
chr1	38027524	38027660	reg1014145.p1	9.380	+	TSC_hg19_v1_chr1_+_38022531 BX647913 NM_003462 BC039074 AF006386 AK225935 AK299918 BC046117 AK290502 AK295199	-5032	+	CU693250 AB464215 AY081909 TSC_hg19_v1_chr1_-_38019895 AK297176 AK300796 AK027622 AK022615 BC027040 NM_024700 AK293229 AK315574	-7701	-	AY211926 AY007166 DQ099384 TSC_hg19_v1_chr1_-_37980356 AB463504 CU677607 EU831681 EU832519 EU832600 AK021792 AK225434 AK225598 AK308118 BX538212 BX640719 NM_022756 BC016328 BC056406 AK309663	-47225	-	CU674042 CU679273 DQ892183 EU176692 TSC_hg19_v1_chr1_-_38061508 L05425	33878	-	BC000107 BC009250 TSC_hg19_v1_chr1_-_38061537 AK307352 AK298358 AK312915	33939	-	TSC_hg19_v1_chr1_-_38061544 NM_013285	33972	-	BX647913|DNALI1|7802|dynein, axonemal, light intermediate chain 1##NM_003462|DNALI1|7802|dynein, axonemal, light intermediate chain 1##BC039074|DNALI1|7802|dynein, axonemal, light intermediate chain 1##AF006386|DNALI1|7802|dynein, axonemal, light intermediate chain 1##AK225935|DNALI1|7802|dynein, axonemal, light intermediate chain 1##AK299918|DNALI1|7802|dynein, axonemal, light intermediate chain 1##BC046117|DNALI1|7802|dynein, axonemal, light intermediate chain 1##AK290502|DNALI1|7802|dynein, axonemal, light intermediate chain 1##AK295199|DNALI1|7802|dynein, axonemal, light intermediate chain 1##AY081909|SNIP1|79753|Smad nuclear interacting protein 1##AK297176|SNIP1|79753|Smad nuclear interacting protein 1##AK300796|SNIP1|79753|Smad nuclear interacting protein 1##AK027622|SNIP1|79753|Smad nuclear interacting protein 1##AK022615|SNIP1|79753|Smad nuclear interacting protein 1##BC027040|SNIP1|79753|Smad nuclear interacting protein 1##NM_024700|SNIP1|79753|Smad nuclear interacting protein 1##AK293229|SNIP1|79753|Smad nuclear interacting protein 1##AK315574|SNIP1|79753|Smad nuclear interacting protein 1##AY211926|MEAF6|64769|MYST/Esa1-associated factor 6##AY007166|MEAF6|64769|MYST/Esa1-associated factor 6##DQ099384|MEAF6|64769|MYST/Esa1-associated factor 6##EU831681|MEAF6|64769|MYST/Esa1-associated factor 6##EU832519|MEAF6|64769|MYST/Esa1-associated factor 6##EU832600|MEAF6|64769|MYST/Esa1-associated factor 6##AK021792|MEAF6|64769|MYST/Esa1-associated factor 6##AK225434|MEAF6|64769|MYST/Esa1-associated factor 6##AK225598|MEAF6|64769|MYST/Esa1-associated factor 6##AK308118|MEAF6|64769|MYST/Esa1-associated factor 6##BX538212|MEAF6|64769|MYST/Esa1-associated factor 6##BX640719|MEAF6|64769|MYST/Esa1-associated factor 6##NM_022756|MEAF6|64769|MYST/Esa1-associated factor 6##BC016328|MEAF6|64769|MYST/Esa1-associated factor 6##BC056406|MEAF6|64769|MYST/Esa1-associated factor 6##AK309663|MEAF6|64769|MYST/Esa1-associated factor 6##DQ892183|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##EU176692|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##L05425|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##BC000107|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##BC009250|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##AK307352|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##AK298358|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##AK312915|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##NM_013285|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)	0.909904	CTCF.p2:-20:0.910
chr14	20884037	20884188	reg1014325.p1	9.380	+	BC143812 BC126107 BC143815 NM_007110 U86136 TSC_hg19_v1_chr14_-_20881589	-2529	-	TSC_hg19_v1_chr14_+_20811793 AK290079 AK300971 AK001980 AJ236912	-72316	+	TSC_hg19_v1_chr14_+_20811783 NM_001042618 NM_005484	-72365	+	NM_001109997	19688	-	AJ271669 CR457232 AB463988 DQ894806 EU176277 AF052137 AB050442 TSC_hg19_v1_chr14_-_20922951	38789	-	TSC_hg19_v1_chr14_-_20922972 AK000418 BC032310	38883	-	BC143812|TEP1|7011|telomerase-associated protein 1##BC126107|TEP1|7011|telomerase-associated protein 1##BC143815|TEP1|7011|telomerase-associated protein 1##NM_007110|TEP1|7011|telomerase-associated protein 1##U86136|TEP1|7011|telomerase-associated protein 1##AK290079|PARP2|10038|poly (ADP-ribose) polymerase 2##AK300971|PARP2|10038|poly (ADP-ribose) polymerase 2##AK001980|PARP2|10038|poly (ADP-ribose) polymerase 2##AJ236912|PARP2|10038|poly (ADP-ribose) polymerase 2##NM_001042618|PARP2|10038|poly (ADP-ribose) polymerase 2##NM_005484|PARP2|10038|poly (ADP-ribose) polymerase 2##NM_001109997|KLHL33|123103|kelch-like 33 (Drosophila)##AJ271669|OSGEP|55644|O-sialoglycoprotein endopeptidase##CR457232|OSGEP|55644|O-sialoglycoprotein endopeptidase##DQ894806|OSGEP|55644|O-sialoglycoprotein endopeptidase##EU176277|OSGEP|55644|O-sialoglycoprotein endopeptidase##AF052137|OSGEP|55644|O-sialoglycoprotein endopeptidase##AB050442|OSGEP|55644|O-sialoglycoprotein endopeptidase##AK000418|OSGEP|55644|O-sialoglycoprotein endopeptidase##BC032310|OSGEP|55644|O-sialoglycoprotein endopeptidase	0.6315	CTCF.p2:-9:0.631
chr2	190563117	190563239	reg1014382.p1	9.379	+	AK126073 NM_144708	-22468	+	TSC_hg19_v1_chr2_+_190539326 BC037215 AK307328 BC047413	-23818	+	NM_019048 AK000759 TSC_hg19_v1_chr2_+_190526184 BC001243	-37007	+	AK314565 NM_022353 AK055441	64759	-	NM_000534 NM_001128143 NM_001128144	85632	+	TSC_hg19_v1_chr2_-_190649062 AF151036 AF395704 AK313533 BC005200	85856	-	AK126073|ANKAR|150709|ankyrin and armadillo repeat containing##NM_144708|ANKAR|150709|ankyrin and armadillo repeat containing##BC037215|ANKAR|150709|ankyrin and armadillo repeat containing##AK307328|ANKAR|150709|ankyrin and armadillo repeat containing##BC047413|ANKAR|150709|ankyrin and armadillo repeat containing##NM_019048|ASNSD1|54529|asparagine synthetase domain containing 1##AK000759|ASNSD1|54529|asparagine synthetase domain containing 1##BC001243|ASNSD1|54529|asparagine synthetase domain containing 1##AK314565|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1##NM_022353|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1##AK055441|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1##NM_000534|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##NM_001128143|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##NM_001128144|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AF151036|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AF395704|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AK313533|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##BC005200|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)	0.999397	CTCF.p2:-20:0.999
chr7	96044380	96044477	reg1012342.p1	9.379	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	-93026	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	-642520	+	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	-818565	-	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	88399	-	CR456887 TSC_hg19_v1_chr7_-_96339159 AK309241 BC032782	294690	-	TSC_hg19_v1_chr7_-_96339174 AK291070 NM_006304 U41515	294758	-	DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280##CR456887|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##AK309241|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##BC032782|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##AK291070|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##NM_006304|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##U41515|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1	0.314958	CTCF.p2:-1:0.315
chrX	72156438	72156575	reg1015509.p1	9.379	+	AB527486 CU688748 NM_001080851 NM_033053	-60932	-	NM_001080851 NM_033053 AB527486 CU688748	-91584	+	X73878 BC104944 BC143499 BC143501 X73874 NM_001122670 NM_001172436 NM_002637 TSC_hg19_v1_chrX_-_71934110	-222563	-	NM_001042506 BC041956 BC136492 AB528886	66910	+	AB528886 BC136492 NM_001012977	142781	-	TSC_hg19_v1_chrX_-_72434633 BC026325	278122	-	NM_001080851|DMRTC1B|728656|DMRT-like family C1B##NM_033053|DMRTC1|63947|DMRT-like family C1##NM_001080851|DMRTC1B|728656|DMRT-like family C1B##NM_033053|DMRTC1|63947|DMRT-like family C1##X73878|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##BC104944|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##BC143499|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##BC143501|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##X73874|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##NM_001122670|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##NM_001172436|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##NM_002637|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##NM_001042506|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B##BC041956|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B##BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B##BC136492|PABPC1L2B|645974|poly(A) binding protein, cytoplasmic 1-like 2B##NM_001012977|PABPC1L2A|340529|poly(A) binding protein, cytoplasmic 1-like 2A##BC026325|NAP1L2|4674|nucleosome assembly protein 1-like 2	0.996036	CTCF.p2:2:0.996
chr10	67940605	67940734	reg1011570.p2	9.378	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-2659428	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-2659507	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-2659554	+	NM_178011 BX640611 AY358315 BC111492	745146	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	1484727	-	AF091606 AK313882 NM_013266	1515268	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.999255	CTCF.p2:9:0.999
chr12	53645420	53645548	reg1011770.p1	9.378	+	NM_001170790 AK097576	-82	+	TSC_hg19_v1_chr12_-_53625973 BC064524 AK297023 M24857 L12060 BC072462 AK297110 AK290588 NM_000966 NM_001243730 NM_001243731	-19548	-	TSC_hg19_v1_chr12_-_53614137 AK301057 AK297277 NM_001042728 NM_001243732	-31326	-	TSC_hg19_v1_chr12_+_53645885 NM_032889 AK074684	396	+	TSC_hg19_v1_chr12_+_53645948 AY358604 BC067795 BX640649	459	+	TSC_hg19_v1_chr12_+_53646007 AK225998	512	+	NM_001170790|MFSD5|84975|major facilitator superfamily domain containing 5##AK097576|MFSD5|84975|major facilitator superfamily domain containing 5##BC064524|RARG|5916|retinoic acid receptor, gamma##AK297023|RARG|5916|retinoic acid receptor, gamma##M24857|RARG|5916|retinoic acid receptor, gamma##L12060|RARG|5916|retinoic acid receptor, gamma##BC072462|RARG|5916|retinoic acid receptor, gamma##AK297110|RARG|5916|retinoic acid receptor, gamma##AK290588|RARG|5916|retinoic acid receptor, gamma##NM_000966|RARG|5916|retinoic acid receptor, gamma##NM_001243730|RARG|5916|retinoic acid receptor, gamma##NM_001243731|RARG|5916|retinoic acid receptor, gamma##AK301057|RARG|5916|retinoic acid receptor, gamma##AK297277|RARG|5916|retinoic acid receptor, gamma##NM_001042728|RARG|5916|retinoic acid receptor, gamma##NM_001243732|RARG|5916|retinoic acid receptor, gamma##NM_032889|MFSD5|84975|major facilitator superfamily domain containing 5##AK074684|MFSD5|84975|major facilitator superfamily domain containing 5##AY358604|MFSD5|84975|major facilitator superfamily domain containing 5##BC067795|MFSD5|84975|major facilitator superfamily domain containing 5##BX640649|MFSD5|84975|major facilitator superfamily domain containing 5##AK225998|MFSD5|84975|major facilitator superfamily domain containing 5	0.09627	
chr7	14757472	14757619	reg1014593.p1	9.378	+	NM_001163148	-726496	-	NM_001163149 X87175	-726677	-	NM_001163147 NM_004956	-727904	-	BC105005 BC143632 BC143633 NM_004080 NM_145695	123469	-	BC108676 AK131284 NM_001004320	844061	-	AB463880 CR536553 CU677801 L36328 TSC_hg19_v1_chr7_-_15726203 BC017021 AK313386	968584	-	NM_001163148|ETV1|2115|ets variant 1##NM_001163149|ETV1|2115|ets variant 1##X87175|ETV1|2115|ets variant 1##NM_001163147|ETV1|2115|ets variant 1##NM_004956|ETV1|2115|ets variant 1##BC105005|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143632|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143633|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_004080|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_145695|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC108676|AGMO|392636|alkylglycerol monooxygenase##AK131284|AGMO|392636|alkylglycerol monooxygenase##NM_001004320|AGMO|392636|alkylglycerol monooxygenase##CR536553|MEOX2|4223|mesenchyme homeobox 2##L36328|MEOX2|4223|mesenchyme homeobox 2##BC017021|MEOX2|4223|mesenchyme homeobox 2##AK313386|MEOX2|4223|mesenchyme homeobox 2	0.303771	CTCF.p2:-12:0.304
chr11	130697826	130697916	reg1012170.p1	9.377	+	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-379209	+	TSC_hg19_v1_chr11_-_130298505 NM_007037	-399351	-	BC113874 TSC_hg19_v1_chr11_-_130298419 BC089435	-399509	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	88474	-	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	88517	-	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	542598	+	AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_007037|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC113874|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC089435|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin	0.915572	CTCF.p2:9:0.916
chr13	47177578	47177719	reg1016225.p1	9.377	+	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-50141	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-50228	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	-50325	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	193667	-	AK314132 BX647777 AK302787 NM_000621 NM_001165947	293419	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1397803	-	HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.557528	CTCF.p2:-3:0.558
chr6	40880202	40880320	reg1013207.p1	9.377	+	BC142616 AB033072 NM_020737 AK291474	-325117	-	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-978047	-	AB527188 AJ224328 NM_005943	-984876	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	126688	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	130085	+	AK223461 AK308197 AK310006 AK313288 NM_006789 BC047767 AF161698 BC069688 BC069764 AK300689	140738	+	BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2##AK223461|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK308197|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK310006|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK313288|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##NM_006789|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC047767|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AF161698|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069688|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069764|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK300689|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2	0.681276	CTCF.p2:24:0.681
chr8	23716946	23717057	reg1013726.p2	9.377	+	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	-4690	-	AB464642 NM_001136271	-152891	-	AB464643 AF249669 AF249670 AF249671 AF249672 EU446642 U91540 U80669 BC074863 BC074864 BC111569 BC111574 AF247704 NM_006167 TSC_hg19_v1_chr8_-_23540449	-176570	-	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	434606	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	524906	+	BC058037 AK292492 NM_003817 AF215824 CU691292 AB527100	581530	+	BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1##AB464642|NKX2-6|137814|NK2 homeobox 6##NM_001136271|NKX2-6|137814|NK2 homeobox 6##AF249669|NKX3-1|4824|NK3 homeobox 1##AF249670|NKX3-1|4824|NK3 homeobox 1##AF249671|NKX3-1|4824|NK3 homeobox 1##AF249672|NKX3-1|4824|NK3 homeobox 1##EU446642|NKX3-1|4824|NK3 homeobox 1##U91540|NKX3-1|4824|NK3 homeobox 1##U80669|NKX3-1|4824|NK3 homeobox 1##BC074863|NKX3-1|4824|NK3 homeobox 1##BC074864|NKX3-1|4824|NK3 homeobox 1##AF247704|NKX3-1|4824|NK3 homeobox 1##NM_006167|NKX3-1|4824|NK3 homeobox 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1##BC058037|ADAM7|8756|ADAM metallopeptidase domain 7##AK292492|ADAM7|8756|ADAM metallopeptidase domain 7##NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7##AF215824|ADAM7|8756|ADAM metallopeptidase domain 7	0.162728	
chr9	117270105	117270257	reg1016324.p1	9.377	+	BC142684 TSC_hg19_v1_chr9_-_117267731 AK056190 BC142614 NM_001173425 NM_015404	-2451	-	AL110228 NM_001083885	-4708	-	AY703039 AK126136 TSC_hg19_v1_chr9_-_117160753	-109430	-	NM_004888 TSC_hg19_v1_chr9_+_117350048 BC003564 AF038954 BC008452	79857	+	TSC_hg19_v1_chr9_+_117350103 CU678965 CR456971 CR542237	79926	+	TSC_hg19_v1_chr9_+_117373735 NM_153045 AK289383 BC107133 BC107134 BX649023	103588	+	BC142684|DFNB31|25861|deafness, autosomal recessive 31##AK056190|DFNB31|25861|deafness, autosomal recessive 31##BC142614|DFNB31|25861|deafness, autosomal recessive 31##NM_001173425|DFNB31|25861|deafness, autosomal recessive 31##NM_015404|DFNB31|25861|deafness, autosomal recessive 31##AL110228|DFNB31|25861|deafness, autosomal recessive 31##NM_001083885|DFNB31|25861|deafness, autosomal recessive 31##AY703039|AKNA|80709|AT-hook transcription factor##AK126136|AKNA|80709|AT-hook transcription factor##NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##CR456971|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##CR542237|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##NM_153045|C9orf91|203197|chromosome 9 open reading frame 91##AK289383|C9orf91|203197|chromosome 9 open reading frame 91##BC107133|C9orf91|203197|chromosome 9 open reading frame 91##BC107134|C9orf91|203197|chromosome 9 open reading frame 91##BX649023|C9orf91|203197|chromosome 9 open reading frame 91	0.358985	CTCF.p2:1:0.359
chr2	50629621	50629742	reg1014236.p1	9.376	+	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	-54759	-	AY429104 BC096831 X68044 JN003607 BC118548 BC125270 M65085 S59900 M95489 AK292562 AK310367 NM_000145 NM_181446	-1248071	-	S57793 M63108 M73746 AK123498 NM_000233	-1646837	-	TSC_hg19_v1_chr2_-_51259258 BC046631	629577	-	EF539882 AK124726 NM_001135659 NM_004801	629923	-	BC019239 BC025376 NM_001008708 BC053896 BC017941 AK097260	3365275	+	AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##AY429104|FSHR|2492|follicle stimulating hormone receptor##BC096831|FSHR|2492|follicle stimulating hormone receptor##X68044|FSHR|2492|follicle stimulating hormone receptor##JN003607|FSHR|2492|follicle stimulating hormone receptor##BC118548|FSHR|2492|follicle stimulating hormone receptor##BC125270|FSHR|2492|follicle stimulating hormone receptor##M65085|FSHR|2492|follicle stimulating hormone receptor##S59900|FSHR|2492|follicle stimulating hormone receptor##M95489|FSHR|2492|follicle stimulating hormone receptor##AK292562|FSHR|2492|follicle stimulating hormone receptor##AK310367|FSHR|2492|follicle stimulating hormone receptor##NM_000145|FSHR|2492|follicle stimulating hormone receptor##NM_181446|FSHR|2492|follicle stimulating hormone receptor##S57793|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M63108|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M73746|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK123498|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##NM_000233|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##BC046631|NRXN1|9378|neurexin 1##EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1##BC019239|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC025376|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##NM_001008708|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC053896|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC017941|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)	0.952511	CTCF.p2:4:0.953
chr3	127572642	127572780	reg1013976.p2	9.376	+	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	-30569	-	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	-31281	-	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-180894	+	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	61607	+	NM_207335 AB590042 AM393308 AM393457	69191	+	TSC_hg19_v1_chr3_+_127771248 AK027423 AK074706 NM_013336	198476	+	AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##NM_207335|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393308|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393457|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AK027423|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AK074706|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##NM_013336|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	0.472122	CTCF.p2:-9:0.472
chr5	151885132	151885265	reg1015036.p1	9.376	+	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	-100447	-	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	-580836	-	TSC_hg19_v1_chr5_+_151151662 X78262	-733534	+	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	985067	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	1533259	-	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	1533326	+	AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##X78262|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3	0.970263	CTCF.p2:3:0.970
chr13	30345452	30345561	reg1012147.p1	9.375	+	TSC_hg19_v1_chr13_-_30169826 NM_003045	-175686	-	X59155 X57303 TSC_hg19_v1_chr13_-_30169595 AK312818 BC063303	-175885	-	AK301633 TSC_hg19_v1_chr13_+_30070532	-274999	+	AK307361 AM393248 AM393364 CR533458 AF044221 AL080177 AK311846 TSC_hg19_v1_chr13_-_30423999	78293	-	BC059385 BC044582 TSC_hg19_v1_chr13_-_30424481	78900	-	TSC_hg19_v1_chr13_-_30424719 AK056580	79196	-	NM_003045|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK301633|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK307361|UBL3|5412|ubiquitin-like 3##AM393248|UBL3|5412|ubiquitin-like 3##AM393364|UBL3|5412|ubiquitin-like 3##CR533458|UBL3|5412|ubiquitin-like 3##AF044221|UBL3|5412|ubiquitin-like 3##AL080177|UBL3|5412|ubiquitin-like 3##AK311846|UBL3|5412|ubiquitin-like 3##BC059385|UBL3|5412|ubiquitin-like 3##BC044582|UBL3|5412|ubiquitin-like 3##AK056580|UBL3|5412|ubiquitin-like 3	0.061946	
chr16	55737461	55737555	reg1012161.p2	9.374	+	BC039309 NM_001172502 AK301811	-31906	+	NM_001043 BC060831 NM_001172504	-47055	+	TSC_hg19_v1_chr16_+_55689899 AK312793 M65105	-47523	+	DQ891472 DQ894656 AK301651 AB025026 TSC_hg19_v1_chr16_-_55867009 M73499 S73751 AF177775 BC009706 AY268104 L07764	129485	-	BC110338 TSC_hg19_v1_chr16_-_55867027 AB119996 AB119995 BC012418 AK290623 AK292209 NM_001025194 NM_001025195 NM_001266	129537	-	AY907669 BC069548 BC069501 BC117126 BC143692 AK056109 NM_001143685 NM_145024	171736	-	BC039309|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##NM_001172502|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##AK301811|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##NM_001043|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##BC060831|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##NM_001172504|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##AK312793|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##M65105|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##DQ891472|CES1|1066|carboxylesterase 1##DQ894656|CES1|1066|carboxylesterase 1##AK301651|CES1|1066|carboxylesterase 1##AB025026|CES1|1066|carboxylesterase 1##M73499|CES1|1066|carboxylesterase 1##S73751|CES1|1066|carboxylesterase 1##AF177775|CES1|1066|carboxylesterase 1##BC009706|CES1|1066|carboxylesterase 1##AY268104|CES1|1066|carboxylesterase 1##L07764|CES1|1066|carboxylesterase 1##BC110338|CES1|1066|carboxylesterase 1##AB119996|CES1|1066|carboxylesterase 1##AB119995|CES1|1066|carboxylesterase 1##BC012418|CES1|1066|carboxylesterase 1##AK290623|CES1|1066|carboxylesterase 1##AK292209|CES1|1066|carboxylesterase 1##NM_001025194|CES1|1066|carboxylesterase 1##NM_001025195|CES1|1066|carboxylesterase 1##NM_001266|CES1|1066|carboxylesterase 1##AY907669|CES5A|221223|carboxylesterase 5A##BC069548|CES5A|221223|carboxylesterase 5A##BC069501|CES5A|221223|carboxylesterase 5A##BC117126|CES5A|221223|carboxylesterase 5A##BC143692|CES5A|221223|carboxylesterase 5A##AK056109|CES5A|221223|carboxylesterase 5A##NM_001143685|CES5A|221223|carboxylesterase 5A##NM_145024|CES5A|221223|carboxylesterase 5A	0.999253	CTCF.p2:0:0.999
chr5	59583144	59583257	reg1012592.p2	9.374	+	NM_001104631	-393580	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	-518745	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	-518852	-	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	200704	-	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	200840	+	TSC_hg19_v1_chr5_-_59995928 AF490257	412716	-	NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AF490257|DEPDC1B|55789|DEP domain containing 1B	0.73461	CTCF.p2:13:0.735
chr12	113750442	113750570	reg1013483.p1	9.373	+	TSC_hg19_v1_chr12_+_113659290 BC142664 AK057414 BC150203	-91203	+	AB032995 BC152423 TSC_hg19_v1_chr12_+_113659278 BC136795 BC136796	-91226	+	TSC_hg19_v1_chr12_+_113659268 AK093490 AX748162 NM_001143819 NM_017901 AY083666	-91263	+	BC098174 BC098360 TSC_hg19_v1_chr12_-_113772887	22355	-	TSC_hg19_v1_chr12_-_113772942 NM_024959 AK056179	22419	-	BC002929 BC071832 NM_001159727 NM_173542 TSC_hg19_v1_chr12_+_113796372	45865	+	BC142664|TPCN1|53373|two pore segment channel 1##AK057414|TPCN1|53373|two pore segment channel 1##BC150203|TPCN1|53373|two pore segment channel 1##AB032995|TPCN1|53373|two pore segment channel 1##BC152423|TPCN1|53373|two pore segment channel 1##BC136795|TPCN1|53373|two pore segment channel 1##BC136796|TPCN1|53373|two pore segment channel 1##AK093490|TPCN1|53373|two pore segment channel 1##NM_001143819|TPCN1|53373|two pore segment channel 1##NM_017901|TPCN1|53373|two pore segment channel 1##AY083666|TPCN1|53373|two pore segment channel 1##BC098360|SLC24A6|80024|solute carrier family 24 (sodium/potassium/calcium exchanger), member 6##NM_024959|SLC24A6|80024|solute carrier family 24 (sodium/potassium/calcium exchanger), member 6##AK056179|SLC24A6|80024|solute carrier family 24 (sodium/potassium/calcium exchanger), member 6##NM_001159727|PLBD2|196463|phospholipase B domain containing 2##NM_173542|PLBD2|196463|phospholipase B domain containing 2	0.885815	CTCF.p2:-8:0.886
chr17	79643049	79643155	reg1011050.p1	9.373	+	TSC_hg19_v1_chr17_+_79633775 NM_199287 BC009369 CU679329	-9336	+	TSC_hg19_v1_chr17_-_79633636 AY007126	-9445	-	TSC_hg19_v1_chr17_-_79633609 BC090923 NM_001039842 BC048102 BC038412	-9487	-	BC063687 AK303526 TSC_hg19_v1_chr17_-_79650787 BC042380 AK304718 AK095847 HQ258109 BC105076 BC105078 NM_001040025	7752	-	NM_004712 TSC_hg19_v1_chr17_+_79651020 AK294190 BC003565 U43895	7889	+	TSC_hg19_v1_chr17_+_79651040 D84064	7936	+	NM_199287|CCDC137|339230|coiled-coil domain containing 137##BC009369|CCDC137|339230|coiled-coil domain containing 137##AY007126|C17orf90|339229|chromosome 17 open reading frame 90##BC090923|C17orf90|339229|chromosome 17 open reading frame 90##NM_001039842|C17orf90|339229|chromosome 17 open reading frame 90##BC048102|C17orf90|339229|chromosome 17 open reading frame 90##BC038412|C17orf90|339229|chromosome 17 open reading frame 90##BC063687|ARL16|339231|ADP-ribosylation factor-like 16##AK303526|ARL16|339231|ADP-ribosylation factor-like 16##BC042380|ARL16|339231|ADP-ribosylation factor-like 16##AK304718|ARL16|339231|ADP-ribosylation factor-like 16##AK095847|ARL16|339231|ADP-ribosylation factor-like 16##HQ258109|ARL16|339231|ADP-ribosylation factor-like 16##BC105076|ARL16|339231|ADP-ribosylation factor-like 16##BC105078|ARL16|339231|ADP-ribosylation factor-like 16##NM_001040025|ARL16|339231|ADP-ribosylation factor-like 16##NM_004712|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate##AK294190|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate##BC003565|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate##U43895|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate##D84064|HGS|9146|hepatocyte growth factor-regulated tyrosine kinase substrate	0.830068	CTCF.p2:-13:0.830
chr3	181044536	181044650	reg1012571.p1	9.373	+	NM_001190233 TSC_hg19_v1_chr3_-_180707525 AK311765 BC073989 BC009702 AK309019 AK307097 NM_145261	-337160	-	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	-414115	+	TSC_hg19_v1_chr3_+_180630246 NM_001013438 NM_001013439 NM_005087	-414410	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	372799	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	385120	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	385545	+	NM_001190233|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK311765|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC073989|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC009702|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK307097|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##NM_145261|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013438|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013439|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_005087|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2	0.999068	CTCF.p2:19:0.999
chr8	139698864	139698984	reg1014620.p1	9.373	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-189818	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-3228723	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-3229266	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	227320	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	1016358	-	AB067469 TSC_hg19_v1_chr8_-_141467841	1768901	-	AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9	0.940015	CTCF.p2:13:0.940
chr11	35327435	35327579	reg1014952.p1	9.372	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	-48682	-	TSC_hg19_v1_chr11_+_35198199 AK129808	-129295	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-166647	+	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	113204	-	TSC_hg19_v1_chr11_-_35441106 NM_004171	113596	-	S83375 U01824 TSC_hg19_v1_chr11_-_35441572 AK122843 NM_001195728 NM_001252652	114048	-	CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK129808|CD44|960|CD44 molecule (Indian blood group)##AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.659696	CTCF.p2:17:0.660
chr2	182321950	182322078	reg1013854.p2	9.372	+	NM_000885	-396	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-476187	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-476371	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	36	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	308	+	AJ697855 AJ697856 AY357073 AY690329 AY690330 AY690331 AY690332 AY690333 AJ640141 AJ697858 BC137498 BC137499 AK293844 NM_001030311 NM_001030312 NM_001030313 NM_001160277 NM_201548 TSC_hg19_v1_chr2_-_182521833 HQ426666 HQ426667 HQ426668 HQ426669 HQ426670	199777	-	NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ697855|CERKL|375298|ceramide kinase-like##AJ697856|CERKL|375298|ceramide kinase-like##AY357073|CERKL|375298|ceramide kinase-like##AY690329|CERKL|375298|ceramide kinase-like##AY690330|CERKL|375298|ceramide kinase-like##AY690331|CERKL|375298|ceramide kinase-like##AY690332|CERKL|375298|ceramide kinase-like##AY690333|CERKL|375298|ceramide kinase-like##AJ640141|CERKL|375298|ceramide kinase-like##AJ697858|CERKL|375298|ceramide kinase-like##BC137498|CERKL|375298|ceramide kinase-like##BC137499|CERKL|375298|ceramide kinase-like##AK293844|CERKL|375298|ceramide kinase-like##NM_001030311|CERKL|375298|ceramide kinase-like##NM_001030312|CERKL|375298|ceramide kinase-like##NM_001030313|CERKL|375298|ceramide kinase-like##NM_001160277|CERKL|375298|ceramide kinase-like##NM_201548|CERKL|375298|ceramide kinase-like##HQ426667|CERKL|375298|ceramide kinase-like	0.190848	
chr8	25473405	25473535	reg1015060.p1	9.372	+	TSC_hg19_v1_chr8_+_25316748 AK299278 AL833627 BC015691 BC104450 BC104451	-156636	+	AK292505 TSC_hg19_v1_chr8_+_25316724	-156748	+	NM_152562	-156958	+	BC137106 BC137107 NM_022659 TSC_hg19_v1_chr8_-_25902675 AK001144	429196	-	TSC_hg19_v1_chr8_+_26149035 NM_002717	675551	+	AK314823 TSC_hg19_v1_chr8_+_26149043 BC041071	675579	+	AK299278|CDCA2|157313|cell division cycle associated 2##AL833627|CDCA2|157313|cell division cycle associated 2##BC015691|CDCA2|157313|cell division cycle associated 2##BC104450|CDCA2|157313|cell division cycle associated 2##BC104451|CDCA2|157313|cell division cycle associated 2##AK292505|CDCA2|157313|cell division cycle associated 2##NM_152562|CDCA2|157313|cell division cycle associated 2##BC137106|EBF2|64641|early B-cell factor 2##BC137107|EBF2|64641|early B-cell factor 2##NM_022659|EBF2|64641|early B-cell factor 2##AK001144|EBF2|64641|early B-cell factor 2##NM_002717|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AK314823|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##BC041071|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha	0.0	
chrX	43609757	43609883	reg1013790.p1	9.372	+	TSC_hg19_v1_chrX_+_43515544 AK293926 AK291769 BC008064 CU675911 DQ890676 DQ893857 BT006651	-94258	+	TSC_hg19_v1_chrX_+_43515457 M68840	-94340	+	TSC_hg19_v1_chrX_+_43515423 NM_000240 AK223499	-94406	+	TSC_hg19_v1_chrX_-_43741500 S62734 CU692654 GQ129432 GQ129433	131703	-	AK294306 M69177 TSC_hg19_v1_chrX_-_43741666 BC022494 AK310458 AK312679 NM_000898	131847	-	NM_000266	223100	-	AK293926|MAOA|4128|monoamine oxidase A##AK291769|MAOA|4128|monoamine oxidase A##BC008064|MAOA|4128|monoamine oxidase A##DQ890676|MAOA|4128|monoamine oxidase A##DQ893857|MAOA|4128|monoamine oxidase A##BT006651|MAOA|4128|monoamine oxidase A##M68840|MAOA|4128|monoamine oxidase A##NM_000240|MAOA|4128|monoamine oxidase A##AK223499|MAOA|4128|monoamine oxidase A##S62734|MAOB|4129|monoamine oxidase B##GQ129432|MAOB|4129|monoamine oxidase B##GQ129433|MAOB|4129|monoamine oxidase B##AK294306|MAOB|4129|monoamine oxidase B##M69177|MAOB|4129|monoamine oxidase B##BC022494|MAOB|4129|monoamine oxidase B##AK310458|MAOB|4129|monoamine oxidase B##AK312679|MAOB|4129|monoamine oxidase B##NM_000898|MAOB|4129|monoamine oxidase B##NM_000266|NDP|4693|Norrie disease (pseudoglioma)	1.226915	CTCF.p2:14:0.999	CTCF.p2:41:0.227
chr16	49955878	49955997	reg1015269.p1	9.371	+	NM_015069	-95020	-	BC021181 BC021718 NM_144602 CU676858	-548109	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-640203	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	103203	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	143956	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	144023	+	NM_015069|ZNF423|23090|zinc finger protein 423##BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3	0.981825	CTCF.p2:10:0.982
chr7	84671061	84671186	reg1013393.p1	9.371	+	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-846801	-	NM_012431	-1392645	-	AK303925 NM_001178129	-1400377	-	NM_152754	80123	-	AK309116 TSC_hg19_v1_chr7_-_84816296	145112	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	1602102	+	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3	0.999768	CTCF.p2:-8:1.000
chr11	12433960	12434070	reg1013335.p1	9.370	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	-34906	+	AK123671 NM_032867	-125569	+	TSC_hg19_v1_chr11_+_12132122 BC044577 NM_014632 BC015755 AB018293	-301885	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	261948	+	TSC_hg19_v1_chr11_+_12960793 AK075236	526796	+	TSC_hg19_v1_chr11_+_13030883 NM_001080521	596909	+	NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha##AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##BC044577|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_014632|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##BC015755|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB018293|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_001080521|RASSF10|644943|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10	0.972307	CTCF.p2:1:0.972
chr9	129373990	129374081	reg1012417.p2	9.369	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-284868	+	AK309713 NM_001134778	-863558	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-864335	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	2726	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	193275	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	248909	+	NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34	0.999401	CTCF.p2:-6:0.999
chr9	41424485	41424618	reg1015644.p1	9.369	+	BC040528 NM_001113541 NM_015667 NM_001242613	-97172	-	AK057375 AK292150 NM_033160	-632465	-	NM_001083124	-724261	+	BC040528 NM_001113541 NM_015667	76127	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	530363	-	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	943807	+	BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##AK057375|ZNF658|26149|zinc finger protein 658##AK292150|ZNF658|26149|zinc finger protein 658##NM_033160|ZNF658|26149|zinc finger protein 658##NM_001083124|FAM75A3|727830|family with sequence similarity 75, member A3##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1	0.969308	CTCF.p2:3:0.969
chr1	7102895	7103026	reg1014906.p1	9.368	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-257469	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-341029	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-341078	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	728416	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	741449	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	741865	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.995851	CTCF.p2:2:0.996
chr4	123835596	123835722	reg1014104.p1	9.368	+	TSC_hg19_v1_chr4_+_123747985 M27968	-87693	+	TSC_hg19_v1_chr4_+_123747833 J04513 NM_002006 BC111737 BC118573 BC118654	-87815	+	AK123553 NM_001178007 NM_152618 BC055426 TSC_hg19_v1_chr4_+_123653916 BX538148	-181754	+	TSC_hg19_v1_chr4_-_123843731 DQ893139 DQ896423 BC009842 AB209758 AK291871 AF019633 NM_007083	8102	-	AF019632 AK294450 NM_198041	8481	-	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	8593	+	M27968|FGF2|2247|fibroblast growth factor 2 (basic)##J04513|FGF2|2247|fibroblast growth factor 2 (basic)##NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)##BC111737|FGF2|2247|fibroblast growth factor 2 (basic)##AK123553|BBS12|166379|Bardet-Biedl syndrome 12##NM_001178007|BBS12|166379|Bardet-Biedl syndrome 12##NM_152618|BBS12|166379|Bardet-Biedl syndrome 12##BC055426|BBS12|166379|Bardet-Biedl syndrome 12##BX538148|BBS12|166379|Bardet-Biedl syndrome 12##DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AF019632|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK294450|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_198041|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5	0.988273	CTCF.p2:4:0.988
chr7	5896205	5896333	reg1012694.p2	9.368	+	TSC_hg19_v1_chr7_+_5862862 AX721099	-33403	+	TSC_hg19_v1_chr7_+_5862791 AK291169 AK096288	-33484	+	BC004947 TSC_hg19_v1_chr7_-_5821284 AK297231 BC063825 AK092767 AX747717 AK297416 BX537406 NM_207111 NM_207116 AK292396	-74960	-	BC147028 BC147029 BC113704 BC113706 NM_001097622 CU686830 BC069468 BC069512 BC069550 HQ258718	24204	+	BC067810 NM_015622 BC132749 BC132751 AK292326 BC010130 CU679629	42111	+	AK314983 BC034495 NM_001099697 NM_173565	114044	-	AK291169|ZNF815|401303|zinc finger protein 815##AK096288|ZNF815|401303|zinc finger protein 815##BC004947|RNF216|54476|ring finger protein 216##AK297231|RNF216|54476|ring finger protein 216##BC063825|RNF216|54476|ring finger protein 216##AK092767|RNF216|54476|ring finger protein 216##AK297416|RNF216|54476|ring finger protein 216##BX537406|RNF216|54476|ring finger protein 216##NM_207111|RNF216|54476|ring finger protein 216##NM_207116|RNF216|54476|ring finger protein 216##AK292396|RNF216|54476|ring finger protein 216##BC147028|OCM|654231|oncomodulin##BC147029|OCM|654231|oncomodulin##BC113704|OCM|654231|oncomodulin##BC113706|OCM|654231|oncomodulin##NM_001097622|OCM|654231|oncomodulin##BC069468|OCM|654231|oncomodulin##BC069512|OCM|654231|oncomodulin##BC069550|OCM|654231|oncomodulin##HQ258718|OCM|654231|oncomodulin##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_015622|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)	0.753338	CTCF.p2:-15:0.753
chr10	30024822	30024948	reg1013742.p1	9.367	+	TSC_hg19_v1_chr10_-_30024866 AF051850 NM_003174	-121	-	AF109135 NM_021738 TSC_hg19_v1_chr10_-_29923901	-100978	-	TSC_hg19_v1_chr10_-_29923841 BC057241 BC070247	-101024	-	TSC_hg19_v1_chr10_-_30025865 AK307640	1021	-	TSC_hg19_v1_chr10_-_30316350 BC047548	291546	-	TSC_hg19_v1_chr10_-_30348516 AK308850 NM_020848 BC071601	323609	-	AF051850|SVIL|6840|supervillin##NM_003174|SVIL|6840|supervillin##AF109135|SVIL|6840|supervillin##NM_021738|SVIL|6840|supervillin##AK307640|SVIL|6840|supervillin##BC047548|KIAA1462|57608|KIAA1462##AK308850|KIAA1462|57608|KIAA1462##NM_020848|KIAA1462|57608|KIAA1462##BC071601|KIAA1462|57608|KIAA1462	0.997781	CTCF.p2:15:0.998
chr21	35739762	35739897	reg1015622.p1	9.366	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	-3483	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	-293900	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	-293988	+	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	7996	+	AY789480 NM_001127670 EU008570	88243	-	AK311384 AY789479 EU008568 EU008569 AK313543 BC036452 NM_001127668 NM_001127669	92049	-	AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK311384|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AY789479|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008568|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008569|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK313543|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC036452|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127668|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127669|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1	0.844644	CTCF.p2:-1:0.845
chr4	154564669	154564826	reg1014584.p1	9.366	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-177255	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-298872	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-298960	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	40651	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	40683	+	TSC_hg19_v1_chr4_+_154605441 BC033756	40717	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.953046	CTCF.p2:16:0.953
chr5	57773737	57773854	reg1015287.p1	9.366	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	-17859	-	BC137470 BC137473 BX648504 NM_001017992	-995201	-	NM_001127236 AL136844 AB463051 AM392551 AM393442	-1263867	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	13499	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	105124	+	BC036319 NM_001197223	521963	-	DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.880951	CTCF.p2:-18:0.881
chr11	109568109	109568207	reg1010993.p1	9.365	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-275259	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-275315	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-1032344	+	AK095101 TSC_hg19_v1_chr11_+_109963524	395370	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	395972	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	599155	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.959468	CTCF.p2:-1:0.959
chr5	141081823	141081936	reg1010368.p2	9.365	+	TSC_hg19_v1_chr5_-_141061801 NM_022481	-20062	-	AJ310567 TSC_hg19_v1_chr5_-_141061794 AK091385 AX746950 AK290052	-20107	-	TSC_hg19_v1_chr5_-_141030986 AY217346 NM_033449	-50896	-	CU690208 TSC_hg19_v1_chr5_-_141257848	175960	-	BC035812 NM_002587 NM_032420 BC051287 BC075821 TSC_hg19_v1_chr5_-_141257976 AK289512	176080	-	TSC_hg19_v1_chr5_+_141303403 NM_001142603 NM_014773 BC007855 D50931 AK292869	221530	+	NM_022481|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AJ310567|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK091385|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK290052|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AY217346|FCHSD1|89848|FCH and double SH3 domains 1##NM_033449|FCHSD1|89848|FCH and double SH3 domains 1##BC035812|PCDH1|5097|protocadherin 1##NM_002587|PCDH1|5097|protocadherin 1##NM_032420|PCDH1|5097|protocadherin 1##BC051287|PCDH1|5097|protocadherin 1##BC075821|PCDH1|5097|protocadherin 1##AK289512|PCDH1|5097|protocadherin 1##NM_001142603|KIAA0141|9812|KIAA0141##NM_014773|KIAA0141|9812|KIAA0141##BC007855|KIAA0141|9812|KIAA0141##D50931|KIAA0141|9812|KIAA0141##AK292869|KIAA0141|9812|KIAA0141	0.856592	CTCF.p2:0:0.857
chr9	4339442	4339576	reg1015067.p1	9.365	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-39478	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-39546	-	TSC_hg19_v1_chr9_-_4299574 DQ438882 DQ438887 DQ438892 DQ438899 DQ438902	-39926	-	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	150928	+	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	322802	+	AK295831 NM_001039395	327160	-	AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##DQ438882|GLIS3|169792|GLIS family zinc finger 3##DQ438887|GLIS3|169792|GLIS family zinc finger 3##DQ438892|GLIS3|169792|GLIS family zinc finger 3##DQ438899|GLIS3|169792|GLIS family zinc finger 3##DQ438902|GLIS3|169792|GLIS family zinc finger 3##NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68	0.848636	CTCF.p2:3:0.849
chr3	151556909	151557031	reg1013226.p1	9.364	+	NM_001086 L32179 BC020706 AK290628 BC032309 CU689322	-25066	+	TSC_hg19_v1_chr3_+_151488214 BC014344	-68740	+	BX647585 NM_207365 BC065724	-105262	+	TSC_hg19_v1_chr3_+_151591430 AK290420 NM_033050 BC030948 AF247785	34483	+	NM_021038 NM_207292	428858	+	TSC_hg19_v1_chr3_+_151986753 BC050535 BC043493	429772	+	NM_001086|AADAC|13|arylacetamide deacetylase (esterase)##L32179|AADAC|13|arylacetamide deacetylase (esterase)##BC020706|AADAC|13|arylacetamide deacetylase (esterase)##AK290628|AADAC|13|arylacetamide deacetylase (esterase)##BC032309|AADAC|13|arylacetamide deacetylase (esterase)##BC014344|LOC201651|201651|arylacetamide deacetylase (esterase) pseudogene##BX647585|AADACL2|344752|arylacetamide deacetylase-like 2##NM_207365|AADACL2|344752|arylacetamide deacetylase-like 2##BC065724|AADACL2|344752|arylacetamide deacetylase-like 2##AK290420|SUCNR1|56670|succinate receptor 1##NM_033050|SUCNR1|56670|succinate receptor 1##BC030948|SUCNR1|56670|succinate receptor 1##AF247785|SUCNR1|56670|succinate receptor 1##NM_021038|MBNL1|4154|muscleblind-like (Drosophila)##NM_207292|MBNL1|4154|muscleblind-like (Drosophila)##BC050535|MBNL1|4154|muscleblind-like (Drosophila)##BC043493|MBNL1|4154|muscleblind-like (Drosophila)	0.957297	CTCF.p2:5:0.957
chr4	76769513	76769642	reg1014710.p1	9.364	+	TSC_hg19_v1_chr4_+_76649846 D86326 NM_003715 BC032654 AB590104 AM392946 AM393489 CU689466 DQ894066 EU176195	-119663	+	TSC_hg19_v1_chr4_+_76649814 AK314289	-119762	+	TSC_hg19_v1_chr4_+_76649761 BC016672 AL832010 BC006398	-119813	+	BX648754 AF023456 NM_006239	54050	-	TSC_hg19_v1_chr4_-_76862135 AB161353 AK309271 BC006388 BC011854 NM_001042402 NM_014435	92552	-	TSC_hg19_v1_chr4_-_76878561 AF132198	108984	-	D86326|USO1|8615|USO1 vesicle docking protein homolog (yeast)##NM_003715|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC032654|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AM392946|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AM393489|USO1|8615|USO1 vesicle docking protein homolog (yeast)##DQ894066|USO1|8615|USO1 vesicle docking protein homolog (yeast)##EU176195|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BX648754|PPEF2|5470|protein phosphatase, EF-hand calcium binding domain 2##AF023456|PPEF2|5470|protein phosphatase, EF-hand calcium binding domain 2##NM_006239|PPEF2|5470|protein phosphatase, EF-hand calcium binding domain 2##AB161353|NAAA|27163|N-acylethanolamine acid amidase##AK309271|NAAA|27163|N-acylethanolamine acid amidase##BC006388|NAAA|27163|N-acylethanolamine acid amidase##BC011854|NAAA|27163|N-acylethanolamine acid amidase##NM_001042402|NAAA|27163|N-acylethanolamine acid amidase##NM_014435|NAAA|27163|N-acylethanolamine acid amidase##AF132198|SDAD1|55153|SDA1 domain containing 1	0.867932	CTCF.p2:20:0.868
chr6	143348335	143348448	reg1005485.p2	9.364	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	-82063	-	TSC_hg19_v1_chr6_+_142623443 BX640873	-724985	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-725322	+	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	33604	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	33645	+	TSC_hg19_v1_chr6_+_143382055 BC025278 CU692954 DQ893291 DQ896622 BX538067	33691	+	CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1##BC025278|AIG1|51390|androgen-induced 1##DQ893291|AIG1|51390|androgen-induced 1##DQ896622|AIG1|51390|androgen-induced 1##BX538067|AIG1|51390|androgen-induced 1	0.0	
chr14	99882153	99882273	reg1013029.p2	9.363	+	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	-144323	-	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	-144596	-	AK098639 NM_182560	-704264	+	BC120967 BC120968 BC127624 BC127625 TSC_hg19_v1_chr14_-_99947104	64881	-	TSC_hg19_v1_chr14_-_99947132 BC066931 BX161441	64909	-	TSC_hg19_v1_chr14_-_99947170 BC037395	64966	-	AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##BC120967|SETD3|84193|SET domain containing 3##BC120968|SETD3|84193|SET domain containing 3##BC127624|SETD3|84193|SET domain containing 3##BC127625|SETD3|84193|SET domain containing 3##BC066931|SETD3|84193|SET domain containing 3##BX161441|SETD3|84193|SET domain containing 3##BC037395|SETD3|84193|SET domain containing 3	0.999559	CTCF.p2:5:1.000
chr17	41598061	41598209	reg1012266.p1	9.363	+	TSC_hg19_v1_chr17_+_41561383 BC047327 BC044586 AB384688 CU692214	-36740	+	AK294046 TSC_hg19_v1_chr17_+_41561351 BC020697 AK303319 D50487 NM_004941 AK291664	-36838	+	TSC_hg19_v1_chr17_+_41476360 NM_001661 AK314951 BC000043 AB060692 L38490	-121768	+	D12765 TSC_hg19_v1_chr17_-_41622738 DQ396626	24605	-	BC016623 AK290429 AK299019 AK312934 NM_001986	25140	-	TSC_hg19_v1_chr17_-_41623674 AK315961 U18018 NM_001079675	25591	-	BC047327|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC044586|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##NM_001661|ARL4D|379|ADP-ribosylation factor-like 4D##AK314951|ARL4D|379|ADP-ribosylation factor-like 4D##BC000043|ARL4D|379|ADP-ribosylation factor-like 4D##AB060692|ARL4D|379|ADP-ribosylation factor-like 4D##L38490|ARL4D|379|ADP-ribosylation factor-like 4D##D12765|ETV4|2118|ets variant 4##DQ396626|ETV4|2118|ets variant 4##BC016623|ETV4|2118|ets variant 4##AK290429|ETV4|2118|ets variant 4##AK299019|ETV4|2118|ets variant 4##AK312934|ETV4|2118|ets variant 4##NM_001986|ETV4|2118|ets variant 4##AK315961|ETV4|2118|ets variant 4##U18018|ETV4|2118|ets variant 4##NM_001079675|ETV4|2118|ets variant 4	0.755256	CTCF.p2:-16:0.704
chr12	88242149	88242279	reg1013803.p2	9.361	+	BC035851 NM_013244	-1009557	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	-1974088	+	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	-2011977	-	AL833338 BC062424 AK093140 AX747948 NM_152589	180946	-	TSC_hg19_v1_chr12_+_88429312 AK095477 NM_001009894 CR936776 AK311222 BC058014 BX640968 BX537868 BX648026 AK311153 BC035136 BC092422 AB590923 AM392924 AL137488	187172	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	293655	-	BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AL833338|C12orf50|160419|chromosome 12 open reading frame 50##BC062424|C12orf50|160419|chromosome 12 open reading frame 50##AK093140|C12orf50|160419|chromosome 12 open reading frame 50##NM_152589|C12orf50|160419|chromosome 12 open reading frame 50##AK095477|C12orf29|91298|chromosome 12 open reading frame 29##NM_001009894|C12orf29|91298|chromosome 12 open reading frame 29##CR936776|C12orf29|91298|chromosome 12 open reading frame 29##AK311222|C12orf29|91298|chromosome 12 open reading frame 29##BC058014|C12orf29|91298|chromosome 12 open reading frame 29##BX640968|C12orf29|91298|chromosome 12 open reading frame 29##BX537868|C12orf29|91298|chromosome 12 open reading frame 29##BX648026|C12orf29|91298|chromosome 12 open reading frame 29##AK311153|C12orf29|91298|chromosome 12 open reading frame 29##BC035136|C12orf29|91298|chromosome 12 open reading frame 29##BC092422|C12orf29|91298|chromosome 12 open reading frame 29##AM392924|C12orf29|91298|chromosome 12 open reading frame 29##AL137488|C12orf29|91298|chromosome 12 open reading frame 29##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa	0.999386	CTCF.p2:3:0.999
chr3	125648116	125648232	reg1013346.p1	9.361	+	TSC_hg19_v1_chr3_+_125635451 BC032772 BC041080	-12718	+	TSC_hg19_v1_chr3_-_125314371 NM_022776	-333801	-	TSC_hg19_v1_chr3_-_125239050 NM_003794	-409121	-	BC073816 NM_001015050 NM_001195223	7709	-	AF231410 NM_001012337 BC141849 AK302014	39880	+	AK093380 AX748089 NM_001008487	127439	-	BC032772|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC041080|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##NM_022776|OSBPL11|114885|oxysterol binding protein-like 11##NM_003794|SNX4|8723|sorting nexin 4##BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like##AF231410|ROPN1B|152015|rhophilin associated tail protein 1B##NM_001012337|ROPN1B|152015|rhophilin associated tail protein 1B##BC141849|ROPN1B|152015|rhophilin associated tail protein 1B##AK093380|SLC41A3|54946|solute carrier family 41, member 3##NM_001008487|SLC41A3|54946|solute carrier family 41, member 3	0.866375	CTCF.p2:10:0.581	CTCF.p2:-27:0.285
chr8	146125682	146125821	reg1013210.p2	9.361	+	TSC_hg19_v1_chr8_-_146078881 NM_001081003	-46850	-	TSC_hg19_v1_chr8_-_146078452 NM_001081004 NM_014066	-47301	-	TSC_hg19_v1_chr8_-_146078434 AK001477 BC002672	-47323	-	TSC_hg19_v1_chr8_-_146126839 AK294282 BX648173 AK095705 AB208810 BC017091 AK054888 NM_001109689 NM_021061 BC107579	1068	-	TSC_hg19_v1_chr8_-_146176267 BC010996 AK226016 AK096815 AK127625 DQ117529 NM_001029976 NM_006958	50496	-	AK128723 TSC_hg19_v1_chr8_-_146202735	76981	-	NM_001081003|COMMD5|28991|COMM domain containing 5##NM_001081004|COMMD5|28991|COMM domain containing 5##NM_014066|COMMD5|28991|COMM domain containing 5##AK001477|COMMD5|28991|COMM domain containing 5##BC002672|COMMD5|28991|COMM domain containing 5##AK294282|ZNF250|58500|zinc finger protein 250##BX648173|ZNF250|58500|zinc finger protein 250##AK095705|ZNF250|58500|zinc finger protein 250##AB208810|ZNF250|58500|zinc finger protein 250##BC017091|ZNF250|58500|zinc finger protein 250##AK054888|ZNF250|58500|zinc finger protein 250##NM_001109689|ZNF250|58500|zinc finger protein 250##NM_021061|ZNF250|58500|zinc finger protein 250##BC107579|ZNF250|58500|zinc finger protein 250##BC010996|ZNF16|7564|zinc finger protein 16##AK226016|ZNF16|7564|zinc finger protein 16##AK096815|ZNF16|7564|zinc finger protein 16##AK127625|ZNF16|7564|zinc finger protein 16##DQ117529|ZNF16|7564|zinc finger protein 16##NM_001029976|ZNF16|7564|zinc finger protein 16##NM_006958|ZNF16|7564|zinc finger protein 16##AK128723|ZNF252|286101|zinc finger protein 252	0.336047	CTCF.p2:-12:0.336
chr11	41453369	41453526	reg1014627.p1	9.360	+	AB046800 NM_020929	-1137784	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-1138853	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-4833645	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	1880071	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	1880117	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	1880193	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.465585	CTCF.p2:35:0.466
chr16	75436905	75437006	reg1012859.p1	9.360	+	AK124815 NM_001170715	-135005	-	AK295809 NM_001170716	-136263	-	TSC_hg19_v1_chr16_-_75299906 AK302617 NM_001170720 AK027608 AK293808 NM_001170714 NM_001170718	-137130	-	BT009819 CR542111 AB463545 CU674490 DQ890998 EU176574 AK313948 TSC_hg19_v1_chr16_-_75467369 AB009285 D85939 BC000991 NM_006324 AK226031	30370	-	TSC_hg19_v1_chr16_-_75498315 AK094930	61342	-	AM392693 AM393662 AY302139 CU676164 TSC_hg19_v1_chr16_-_75498577	61583	-	AK124815|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170715|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK295809|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170716|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK302617|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170720|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK027608|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK293808|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170714|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170718|BCAR1|9564|breast cancer anti-estrogen resistance 1##BT009819|CFDP1|10428|craniofacial development protein 1##CR542111|CFDP1|10428|craniofacial development protein 1##DQ890998|CFDP1|10428|craniofacial development protein 1##EU176574|CFDP1|10428|craniofacial development protein 1##AK313948|CFDP1|10428|craniofacial development protein 1##AB009285|CFDP1|10428|craniofacial development protein 1##D85939|CFDP1|10428|craniofacial development protein 1##BC000991|CFDP1|10428|craniofacial development protein 1##NM_006324|CFDP1|10428|craniofacial development protein 1##AK226031|CFDP1|10428|craniofacial development protein 1##AK094930|TMEM170A|124491|transmembrane protein 170A##AY302139|TMEM170A|124491|transmembrane protein 170A	0.989629	CTCF.p2:8:0.990
chr18	24201524	24201666	reg1015630.p1	9.360	+	AK289870 BC063652 TSC_hg19_v1_chr18_-_24129261 NM_001136205	-72354	-	NM_001142730 TSC_hg19_v1_chr18_-_24128518	-73085	-	TSC_hg19_v1_chr18_+_23806444 NM_005640 AB234096	-395178	+	AF542549 NM_198991	18712	-	U63623 NM_004028	240959	-	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	244121	-	AK289870|KCTD1|284252|potassium channel tetramerisation domain containing 1##BC063652|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001136205|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_005640|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##AB234096|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1##U63623|AQP4|361|aquaporin 4##NM_004028|AQP4|361|aquaporin 4##AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4	0.2015	CTCF.p2:-6:0.202
chr22	45659789	45659902	reg1011980.p2	9.360	+	TSC_hg19_v1_chr22_-_45636776 AK094937	-23071	-	CU012960 CU013248 CR456402 TSC_hg19_v1_chr22_-_45636622 NM_001009880	-23229	-	AK315883 AK297058 TSC_hg19_v1_chr22_-_45609417	-50477	-	TSC_hg19_v1_chr22_+_45680833 AF085808 BC069544 NM_001167574 NM_006953 BC108900 CR456608 AB010637 AB528272 CU013204 CU013492	21015	+	TSC_hg19_v1_chr22_+_45704858 AK125027 NM_001104595	45105	+	TSC_hg19_v1_chr22_+_45705838 NM_017911 AK000642	45969	+	AK094937|KIAA0930|23313|KIAA0930##CU012960|KIAA0930|23313|KIAA0930##CU013248|KIAA0930|23313|KIAA0930##CR456402|KIAA0930|23313|KIAA0930##NM_001009880|KIAA0930|23313|KIAA0930##AK315883|KIAA0930|23313|KIAA0930##AK297058|KIAA0930|23313|KIAA0930##AF085808|UPK3A|7380|uroplakin 3A##BC069544|UPK3A|7380|uroplakin 3A##NM_001167574|UPK3A|7380|uroplakin 3A##NM_006953|UPK3A|7380|uroplakin 3A##BC108900|UPK3A|7380|uroplakin 3A##CR456608|UPK3A|7380|uroplakin 3A##AB010637|UPK3A|7380|uroplakin 3A##CU013204|UPK3A|7380|uroplakin 3A##CU013492|UPK3A|7380|uroplakin 3A##AK125027|FAM118A|55007|family with sequence similarity 118, member A##NM_001104595|FAM118A|55007|family with sequence similarity 118, member A##NM_017911|FAM118A|55007|family with sequence similarity 118, member A##AK000642|FAM118A|55007|family with sequence similarity 118, member A	0.0	
chrX	20271175	20271317	reg1016648.p1	9.360	+	BT007064 EU831819 EU831896 TSC_hg19_v1_chrX_-_20159957 BC000793 BC110421 AK312320 BC067851 L18960 NM_001412	-111370	-	AK027409 TSC_hg19_v1_chrX_-_20135017 AK303019 AK316117 AK296319 BC136379 BC089400 NM_001168465 NM_001168466 NM_152780	-136182	-	AK294788 NM_001168467	-136494	-	AB102662 L07599 AB384785 BC096301 BC096302 BC096303 NM_004586 U08316 AK313932	13484	-	TSC_hg19_v1_chrX_-_20285001 AB208933	13711	-	TSC_hg19_v1_chrX_-_20285141 AK294373	13918	-	BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##AK027409|MAP7D2|256714|MAP7 domain containing 2##AK303019|MAP7D2|256714|MAP7 domain containing 2##AK316117|MAP7D2|256714|MAP7 domain containing 2##AK296319|MAP7D2|256714|MAP7 domain containing 2##BC136379|MAP7D2|256714|MAP7 domain containing 2##BC089400|MAP7D2|256714|MAP7 domain containing 2##NM_001168465|MAP7D2|256714|MAP7 domain containing 2##NM_001168466|MAP7D2|256714|MAP7 domain containing 2##NM_152780|MAP7D2|256714|MAP7 domain containing 2##AK294788|MAP7D2|256714|MAP7 domain containing 2##NM_001168467|MAP7D2|256714|MAP7 domain containing 2##AB102662|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##L07599|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096301|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096302|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096303|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##NM_004586|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##U08316|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AK313932|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AB208933|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AK294373|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3	0.972001	CTCF.p2:-9:0.972
chr17	37810217	37810375	reg1013474.p2	9.359	+	NM_001165937 NM_001165938 NM_006804 TSC_hg19_v1_chr17_+_37793404 BC008356 AK301524 AK303114 AK300176 AK225069 BC025679 BC008747 D38255 BC019286 X80198 AK300842	-16909	+	AY070271 NM_001242464 NM_181505 AF435973 AF435974 AK024593 AK225058 BC001519	-25535	+	TSC_hg19_v1_chr17_+_37783204 AK123112 AK127542 AK129537 AF435972	-27087	+	NM_003673 BC012628 BC013330 AJ000491 DQ892812 DQ896058	11308	+	BC037246 NM_002686	14210	+	CU679785 AY358437 TSC_hg19_v1_chr17_-_37844279 AB088396 AK314469 BC010652 AK057911 AK075474 AK289612 AK294639 AK301106 NM_033419	33991	-	NM_001165937|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##NM_001165938|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##NM_006804|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC008356|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK301524|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK303114|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK300176|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK225069|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC025679|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC008747|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##D38255|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC019286|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##X80198|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK300842|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AY070271|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##NM_001242464|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##NM_181505|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435973|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435974|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK024593|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK225058|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##BC001519|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK123112|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK127542|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK129537|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435972|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##NM_003673|TCAP|8557|titin-cap (telethonin)##BC012628|TCAP|8557|titin-cap (telethonin)##BC013330|TCAP|8557|titin-cap (telethonin)##AJ000491|TCAP|8557|titin-cap (telethonin)##DQ892812|TCAP|8557|titin-cap (telethonin)##DQ896058|TCAP|8557|titin-cap (telethonin)##BC037246|PNMT|5409|phenylethanolamine N-methyltransferase##NM_002686|PNMT|5409|phenylethanolamine N-methyltransferase##AY358437|PGAP3|93210|post-GPI attachment to proteins 3##AB088396|PGAP3|93210|post-GPI attachment to proteins 3##AK314469|PGAP3|93210|post-GPI attachment to proteins 3##BC010652|PGAP3|93210|post-GPI attachment to proteins 3##AK057911|PGAP3|93210|post-GPI attachment to proteins 3##AK075474|PGAP3|93210|post-GPI attachment to proteins 3##AK289612|PGAP3|93210|post-GPI attachment to proteins 3##AK294639|PGAP3|93210|post-GPI attachment to proteins 3##AK301106|PGAP3|93210|post-GPI attachment to proteins 3##NM_033419|PGAP3|93210|post-GPI attachment to proteins 3	0.999226	CTCF.p2:0:0.999
chr4	111440188	111440292	reg1012719.p1	9.359	+	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	-42867	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	-320455	-	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-606193	+	AK313987 TSC_hg19_v1_chr4_-_111543909	103670	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	104035	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	117929	-	AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK313987|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2	0.997619	CTCF.p2:-3:0.998
chr5	5492614	5492741	reg1013505.p2	9.359	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	-69768	+	TSC_hg19_v1_chr5_+_5422777 AK126937	-69902	+	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	-352166	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	885973	-	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	956176	+	TSC_hg19_v1_chr5_+_6449114 AK057805	956512	+	AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1	0.941203	CTCF.p2:-20:0.941
chr6	105872161	105872309	reg1015066.p1	9.359	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-21240	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-21277	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-21389	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	661961	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	662000	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	674569	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.998809	CTCF.p2:7:0.999
chr7	23397369	23397513	reg1015619.p1	9.359	+	TSC_hg19_v1_chr7_+_23338957 BC012331 NM_138446 AK127742 AK316559	-58476	+	AF322909 TSC_hg19_v1_chr7_+_23286426 BC025297 BC011595 CU679974 CU689536 AB528457 DQ892084 DQ895277 BT007074	-110993	+	TSC_hg19_v1_chr7_+_23286407 AJ505015	-111036	+	TSC_hg19_v1_chr7_-_23509637 AB529064 CU688032	112238	-	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	112557	-	TSC_hg19_v1_chr7_+_23530136 BC026177	132726	+	BC012331|C7orf30|115416|chromosome 7 open reading frame 30##NM_138446|C7orf30|115416|chromosome 7 open reading frame 30##AK127742|C7orf30|115416|chromosome 7 open reading frame 30##AK316559|C7orf30|115416|chromosome 7 open reading frame 30##AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb##BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb##BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb##BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb##AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32	0.997363	CTCF.p2:-17:0.997
chrX	46889842	46890007	reg1013921.p2	9.359	+	TSC_hg19_v1_chrX_+_46771855 AK291220 NM_001077445 D86969 NM_014735 BC113880 BC114487 AF127774	-117989	+	TSC_hg19_v1_chrX_+_46696479 AK312555 CU692158	-193420	+	BC043348 BC053530 TSC_hg19_v1_chrX_+_46696426	-193498	+	TSC_hg19_v1_chrX_+_46937753 AK223360 NM_004683 NM_152869	47835	+	TSC_hg19_v1_chrX_+_46937812 BC050371 BC058880 AK290136	47913	+	TSC_hg19_v1_chrX_+_46937889 BC073173 AB032064	48006	+	AK291220|PHF16|9767|PHD finger protein 16##NM_001077445|PHF16|9767|PHD finger protein 16##D86969|PHF16|9767|PHD finger protein 16##NM_014735|PHF16|9767|PHD finger protein 16##BC113880|PHF16|9767|PHD finger protein 16##BC114487|PHF16|9767|PHD finger protein 16##AF127774|PHF16|9767|PHD finger protein 16##AK312555|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC043348|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC053530|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AK223360|RGN|9104|regucalcin (senescence marker protein-30)##NM_004683|RGN|9104|regucalcin (senescence marker protein-30)##NM_152869|RGN|9104|regucalcin (senescence marker protein-30)##BC050371|RGN|9104|regucalcin (senescence marker protein-30)##BC058880|RGN|9104|regucalcin (senescence marker protein-30)##AK290136|RGN|9104|regucalcin (senescence marker protein-30)##BC073173|RGN|9104|regucalcin (senescence marker protein-30)##AB032064|RGN|9104|regucalcin (senescence marker protein-30)	0.692732	CTCF.p2:-1:0.693
chr4	94712897	94713025	reg1012870.p1	9.358	+	AB209318 NM_001510 AK308611	-1487369	+	BC051694 NM_207491	-3556780	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-3664243	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	37100	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	415850	+	TSC_hg19_v1_chr4_+_95129015 NM_001128429 NM_020159 BC045534 AY008271 BC041800	416153	+	AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.690139	CTCF.p2:-24:0.690
chr5	55565527	55565639	reg1002311.p1	9.358	+	AK123389 NM_024669	-36398	-	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-274820	-	NM_001242636 NM_001242639	-416434	+	NM_005921	545316	+	TSC_hg19_v1_chr5_+_56111375 AK307828	545781	+	TSC_hg19_v1_chr5_+_56111395 AF042838	545835	+	AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.12327	
chr8	124706099	124706227	reg1014215.p1	9.358	+	AB196636 BC127886 NM_001081675	-40986	-	TSC_hg19_v1_chr8_-_124553499 NM_001242463 NM_058229	-152682	-	AY059629 AJ420108 TSC_hg19_v1_chr8_-_124553447 AK056986 EF143260	-152813	-	CR541838 BC125158 AJ306450 Z11502 NM_001003954 NM_004306 AK290281 AK223374	43456	-	TSC_hg19_v1_chr8_+_124780681 AK300603 BC030520	74527	+	TSC_hg19_v1_chr8_+_124780758 DQ228141 NM_144963 BC144630	74650	+	AB196636|KLHL38|340359|kelch-like 38 (Drosophila)##BC127886|KLHL38|340359|kelch-like 38 (Drosophila)##NM_001081675|KLHL38|340359|kelch-like 38 (Drosophila)##NM_001242463|FBXO32|114907|F-box protein 32##NM_058229|FBXO32|114907|F-box protein 32##AY059629|FBXO32|114907|F-box protein 32##AJ420108|FBXO32|114907|F-box protein 32##AK056986|FBXO32|114907|F-box protein 32##EF143260|FBXO32|114907|F-box protein 32##CR541838|ANXA13|312|annexin A13##BC125158|ANXA13|312|annexin A13##AJ306450|ANXA13|312|annexin A13##Z11502|ANXA13|312|annexin A13##NM_001003954|ANXA13|312|annexin A13##NM_004306|ANXA13|312|annexin A13##AK290281|ANXA13|312|annexin A13##AK223374|ANXA13|312|annexin A13##AK300603|FAM91A1|157769|family with sequence similarity 91, member A1##BC030520|FAM91A1|157769|family with sequence similarity 91, member A1##DQ228141|FAM91A1|157769|family with sequence similarity 91, member A1##NM_144963|FAM91A1|157769|family with sequence similarity 91, member A1##BC144630|FAM91A1|157769|family with sequence similarity 91, member A1	0.906986	CTCF.p2:15:0.907
chr9	16133898	16134012	reg1013151.p1	9.358	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-580934	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-622995	-	AF098483 AF098482 NM_021144	-623708	-	TSC_hg19_v1_chr9_-_16727889 AY438376	593942	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	736712	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	736811	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.998374	CTCF.p2:10:0.998
chr12	103720122	103720246	reg1010594.p1	9.357	+	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-368092	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-368663	+	L47726 NM_000277 U49897	-408804	-	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	169562	-	AY311388 AJ295695 NM_017564 AB052958	260877	+	AB032773 TSC_hg19_v1_chr12_-_104234857	514640	-	DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3	0.106774	
chr16	9228737	9228880	reg1014864.p1	9.357	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-43205	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-43268	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-171513	-	BC143273 U09002 NM_001134408	1047025	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	1047380	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	1047869	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.978802	CTCF.p2:18:0.979
chr3	114546485	114546615	reg1013180.p1	9.357	+	AK225788 NM_001164344 NM_001164345	-68430	-	AK315307 NM_001164346 TSC_hg19_v1_chr3_-_114343793	-202756	-	BC029041 NM_001164347	-203498	-	BC090936 NM_001164343	243690	-	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	319564	-	NM_001130064 NM_002045	795600	+	AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20##BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20##BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20##BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43	0.329823	CTCF.p2:12:0.330
chrX	55369647	55369789	reg1015754.p1	9.357	+	BC009230 NM_130467 NM_001013435 AJ344352 BC110803	-122901	+	NM_001190708	-160775	-	TSC_hg19_v1_chrX_-_55187619 NM_001166702 BC006406 BC000919 BC017571 AK000441 AK311699 NM_001166699 NM_001166700 NM_001166701 NM_001166704 NM_138362	-182122	-	AF143235 NM_014061 TSC_hg19_v1_chrX_+_55478594 BC011954 AF320912 AK313527	108855	+	NM_201286 BC035907	145914	-	BC012934 NM_198451	280114	+	BC009230|PAGE5|90737|P antigen family, member 5 (prostate associated)##NM_130467|PAGE5|90737|P antigen family, member 5 (prostate associated)##NM_001013435|PAGE5|90737|P antigen family, member 5 (prostate associated)##AJ344352|PAGE5|90737|P antigen family, member 5 (prostate associated)##BC110803|PAGE5|90737|P antigen family, member 5 (prostate associated)##NM_001190708|MTRNR2L10|100463488|MT-RNR2-like 10##NM_001166702|FAM104B|90736|family with sequence similarity 104, member B##BC006406|FAM104B|90736|family with sequence similarity 104, member B##BC000919|FAM104B|90736|family with sequence similarity 104, member B##BC017571|FAM104B|90736|family with sequence similarity 104, member B##AK000441|FAM104B|90736|family with sequence similarity 104, member B##AK311699|FAM104B|90736|family with sequence similarity 104, member B##NM_001166699|FAM104B|90736|family with sequence similarity 104, member B##NM_001166700|FAM104B|90736|family with sequence similarity 104, member B##NM_001166701|FAM104B|90736|family with sequence similarity 104, member B##NM_001166704|FAM104B|90736|family with sequence similarity 104, member B##NM_138362|FAM104B|90736|family with sequence similarity 104, member B##AF143235|MAGEH1|28986|melanoma antigen family H, 1##NM_014061|MAGEH1|28986|melanoma antigen family H, 1##BC011954|MAGEH1|28986|melanoma antigen family H, 1##AF320912|MAGEH1|28986|melanoma antigen family H, 1##AK313527|MAGEH1|28986|melanoma antigen family H, 1##NM_201286|USP51|158880|ubiquitin specific peptidase 51##BC035907|USP51|158880|ubiquitin specific peptidase 51##BC012934|FOXR2|139628|forkhead box R2##NM_198451|FOXR2|139628|forkhead box R2	0.755469	CTCF.p2:-12:0.755
chr15	40078817	40078950	reg1013188.p1	9.356	+	AK091251 TSC_hg19_v1_chr15_+_40075106	-3777	+	AK093308 AX748045 BC045191 NM_152597	-3855	-	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	-205554	+	CU688250 TSC_hg19_v1_chr15_-_40212342	133402	-	BC067106 TSC_hg19_v1_chr15_-_40212465	133605	-	TSC_hg19_v1_chr15_-_40213138 D38449 NM_007223	134244	-	AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##BC067106|GPR176|11245|G protein-coupled receptor 176##D38449|GPR176|11245|G protein-coupled receptor 176##NM_007223|GPR176|11245|G protein-coupled receptor 176	0.9922	CTCF.p2:-7:0.992
chr17	40831873	40832011	reg1015390.p1	9.356	+	TSC_hg19_v1_chr17_-_40829013 BC016062 AK024672 AB208939 BC052978 NM_024927	-3129	-	TSC_hg19_v1_chr17_-_40828093 AK096767	-3850	-	TSC_hg19_v1_chr17_+_40811298 NM_016437 BC108739 AK225134 BC051890 BC052283 AK022324 BC009670 CU679431 AB464326	-20551	+	AF208237 AY429103 EU832758 GQ129298 AF215981 BC098132 BC098157 BC098304 BC099840 NM_016602	1900	-	TSC_hg19_v1_chr17_+_40834578 NM_003632 U87223 BC171797 AB384696	2766	+	TSC_hg19_v1_chr17_-_40897056 BC015882 AK299887 AK295853 AK304835 AK309121 AK310399 AK311237 AL833159 AK295626 NM_001991	65136	-	BC016062|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AK024672|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AB208939|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##BC052978|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##NM_024927|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AK096767|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##NM_016437|TUBG2|27175|tubulin, gamma 2##BC108739|TUBG2|27175|tubulin, gamma 2##AK225134|TUBG2|27175|tubulin, gamma 2##BC051890|TUBG2|27175|tubulin, gamma 2##BC052283|TUBG2|27175|tubulin, gamma 2##AK022324|TUBG2|27175|tubulin, gamma 2##BC009670|TUBG2|27175|tubulin, gamma 2##AF208237|CCR10|2826|chemokine (C-C motif) receptor 10##AY429103|CCR10|2826|chemokine (C-C motif) receptor 10##EU832758|CCR10|2826|chemokine (C-C motif) receptor 10##GQ129298|CCR10|2826|chemokine (C-C motif) receptor 10##AF215981|CCR10|2826|chemokine (C-C motif) receptor 10##BC098132|CCR10|2826|chemokine (C-C motif) receptor 10##BC098157|CCR10|2826|chemokine (C-C motif) receptor 10##BC098304|CCR10|2826|chemokine (C-C motif) receptor 10##BC099840|CCR10|2826|chemokine (C-C motif) receptor 10##NM_016602|CCR10|2826|chemokine (C-C motif) receptor 10##NM_003632|CNTNAP1|8506|contactin associated protein 1##U87223|CNTNAP1|8506|contactin associated protein 1##BC171797|CNTNAP1|8506|contactin associated protein 1##BC015882|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK299887|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK295853|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK304835|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK309121|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK310399|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK311237|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AL833159|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK295626|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##NM_001991|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	0.629581	CTCF.p2:6:0.630
chr5	126144442	126144553	reg1012878.p1	9.356	+	TSC_hg19_v1_chr5_+_126113050 AB527547 DQ891592 EU176582 CU680274	-31373	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	-31615	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	-31666	+	BC146948 BC146964 AF055007 TSC_hg19_v1_chr5_-_126366251 BC047569 AK290129	221678	-	NM_178450	221942	-	AK126569 NM_001164478 NM_001164479	264680	-	DQ891592|LMNB1|4001|lamin B1##EU176582|LMNB1|4001|lamin B1##AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1##BC146948|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146964|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AF055007|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC047569|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK290129|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63	0.96545	CTCF.p2:39:0.965
chr7	33283042	33283186	reg1013715.p1	9.355	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-114033	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-134137	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-180792	-	AK289963 NM_133468 AK096150 BC060868	662028	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	1414805	+	DQ287932 NM_015283	1794538	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	0.410455	CTCF.p2:1:0.410
chr18	51751143	51751323	reg1011267.p2	9.354	+	TSC_hg19_v1_chr18_-_51751035 AF072242 NM_003927 NM_015832	-156	-	TSC_hg19_v1_chr18_-_51750997 BC032638	-268	-	AF072246 TSC_hg19_v1_chr18_-_51750614	-696	-	NM_007195 TSC_hg19_v1_chr18_+_51795943 AK301578 AF140501 BC032617 BC032662 AL136670 AF245438 AK093688 AB463184 AM392978 DQ890893 DQ896811 CU689468	44707	+	AB528241 AF480305 NM_139171	129709	-	BX640877 NM_173529	133937	+	AF072242|MBD2|8932|methyl-CpG binding domain protein 2##NM_003927|MBD2|8932|methyl-CpG binding domain protein 2##NM_015832|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##NM_007195|POLI|11201|polymerase (DNA directed) iota##AK301578|POLI|11201|polymerase (DNA directed) iota##AF140501|POLI|11201|polymerase (DNA directed) iota##BC032617|POLI|11201|polymerase (DNA directed) iota##BC032662|POLI|11201|polymerase (DNA directed) iota##AL136670|POLI|11201|polymerase (DNA directed) iota##AF245438|POLI|11201|polymerase (DNA directed) iota##AK093688|POLI|11201|polymerase (DNA directed) iota##AM392978|POLI|11201|polymerase (DNA directed) iota##DQ890893|POLI|11201|polymerase (DNA directed) iota##DQ896811|POLI|11201|polymerase (DNA directed) iota##AF480305|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_139171|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##BX640877|C18orf54|162681|chromosome 18 open reading frame 54##NM_173529|C18orf54|162681|chromosome 18 open reading frame 54	0.180135	
chr7	37324454	37324572	reg1013027.p1	9.354	+	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	-298793	-	BC064635 NM_001039459	-299823	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-560437	-	AK291784 NM_001206482	68758	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	163955	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	164042	-	D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1	0.967248	CTCF.p2:-5:0.967
chr10	103991666	103991778	reg1012568.p3	9.353	+	BC034344 NM_152310	-5580	+	NM_004741 TSC_hg19_v1_chr10_+_103912145 Z34289 AK225101 AK314363 AK056755 BC001883 BC006769 DQ891862 DQ895051 AY820769 D21262	-79671	+	AF325193 NM_015062 TSC_hg19_v1_chr10_+_103892796 AK299885 BC063806 AB011167 BC063829 AK095248 AB384505	-98917	+	BC011642 NM_005029	9507	-	NM_001199378 NM_001199379 NM_004193 BC057804 BC068543 TSC_hg19_v1_chr10_+_104005288 BC094763 AK025330 BC032543	13557	+	TSC_hg19_v1_chr10_+_104005308 AF068755 D87435 BC117681 BC117682	13645	+	BC034344|ELOVL3|83401|ELOVL fatty acid elongase 3##NM_152310|ELOVL3|83401|ELOVL fatty acid elongase 3##NM_004741|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##Z34289|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK225101|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK314363|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK056755|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC001883|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC006769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##DQ891862|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##DQ895051|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AY820769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##D21262|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AF325193|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##NM_015062|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AK299885|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC063806|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AB011167|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC063829|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AK095248|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC011642|PITX3|5309|paired-like homeodomain 3##NM_005029|PITX3|5309|paired-like homeodomain 3##NM_001199378|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199379|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	0.403792	CTCF.p2:-15:0.404
chr22	21375275	21375386	reg1013473.p1	9.353	+	BC064805 NM_001159554 AB002058 CR456535 BC109209 AB528202 CU013135 CU013423 AK309079 NM_005446 BC047287 BC063553 BC033488	-5870	+	TSC_hg19_v1_chr22_+_21356508 AK096901 BC065749	-18849	+	TSC_hg19_v1_chr22_-_21356353 BC004346 AK315457 AK300715 NM_001008695 NM_030573	-18953	-	BC062565 AJ000730 BC008814 NM_004173 TSC_hg19_v1_chr22_-_21386851	11521	-	NM_001128633	362332	+	NM_001128635	362709	+	BC064805|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_001159554|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AB002058|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CR456535|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC109209|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013135|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013423|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK309079|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_005446|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC047287|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC063553|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC033488|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK096901|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##BC065749|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##BC004346|THAP7|80764|THAP domain containing 7##AK315457|THAP7|80764|THAP domain containing 7##AK300715|THAP7|80764|THAP domain containing 7##NM_001008695|THAP7|80764|THAP domain containing 7##NM_030573|THAP7|80764|THAP domain containing 7##BC062565|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AJ000730|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC008814|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_004173|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B	0.641307	CTCF.p2:-18:0.641
chr4	111436184	111436316	reg1014162.p1	9.353	+	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	-38877	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	-316465	-	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-602203	+	AK313987 TSC_hg19_v1_chr4_-_111543909	107660	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	108025	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	121919	-	AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK313987|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2	0.124202	
chr10	35529055	35529143	reg1012356.p1	9.352	+	AK289379 NM_182721 NM_182722 NM_182723 NM_182724 NM_182725 AK291566	-44269	+	D14826 NM_182717 NM_182718 NM_182719 NM_182720 AK290612 AF069065 U44836	-45014	+	NM_182769 NM_182770 AF417233 AY292864 BC090051 AK301906	-64568	+	AF429969 AK057280 NM_181698	6853	+	TSC_hg19_v1_chr10_+_35625400 AK314666	96357	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	96695	+	AK289379|CREM|1390|cAMP responsive element modulator##NM_182721|CREM|1390|cAMP responsive element modulator##NM_182722|CREM|1390|cAMP responsive element modulator##NM_182723|CREM|1390|cAMP responsive element modulator##NM_182724|CREM|1390|cAMP responsive element modulator##NM_182725|CREM|1390|cAMP responsive element modulator##AK291566|CREM|1390|cAMP responsive element modulator##D14826|CREM|1390|cAMP responsive element modulator##NM_182717|CREM|1390|cAMP responsive element modulator##NM_182718|CREM|1390|cAMP responsive element modulator##NM_182719|CREM|1390|cAMP responsive element modulator##NM_182720|CREM|1390|cAMP responsive element modulator##AK290612|CREM|1390|cAMP responsive element modulator##AF069065|CREM|1390|cAMP responsive element modulator##U44836|CREM|1390|cAMP responsive element modulator##NM_182769|CREM|1390|cAMP responsive element modulator##NM_182770|CREM|1390|cAMP responsive element modulator##AF417233|CREM|1390|cAMP responsive element modulator##AY292864|CREM|1390|cAMP responsive element modulator##BC090051|CREM|1390|cAMP responsive element modulator##AK301906|CREM|1390|cAMP responsive element modulator##AF429969|CCNY|219771|cyclin Y##AK057280|CCNY|219771|cyclin Y##NM_181698|CCNY|219771|cyclin Y##AK314666|CCNY|219771|cyclin Y##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y	0.964132	CTCF.p2:26:0.964
chr20	43935263	43935393	reg1016223.p1	9.352	+	AF114471 X04503 AB464192 DQ891365 DQ894545 AK312192 X04470 TSC_hg19_v1_chr20_-_43883206 AX772818 BC020708 NM_003064	-52133	-	BC005262 M81652 NM_003008 AK312932 AX772816 BC056675 BC070306 AB464703	-85309	+	NM_003007 AK291811 BC005229 BC007096 BC011442 BC055416 J04440 AB591040 BT007177 CU691118	-99663	+	NM_014276 AB024964 AB026048 AB027710	198	+	BC151219 AK074595 BC141811 AK074597 NM_003833 NM_030590 NM_030592	1614	-	CR542045 CR542074 DQ890718 DQ893898 AB464261 TSC_hg19_v1_chr20_-_43977065 X67016 AK222695 AK223243 AK303964 AK312507 BC030805 D13292 NM_002999	41727	-	AF114471|SLPI|6590|secretory leukocyte peptidase inhibitor##X04503|SLPI|6590|secretory leukocyte peptidase inhibitor##DQ891365|SLPI|6590|secretory leukocyte peptidase inhibitor##DQ894545|SLPI|6590|secretory leukocyte peptidase inhibitor##AK312192|SLPI|6590|secretory leukocyte peptidase inhibitor##X04470|SLPI|6590|secretory leukocyte peptidase inhibitor##AX772818|SLPI|6590|secretory leukocyte peptidase inhibitor##BC020708|SLPI|6590|secretory leukocyte peptidase inhibitor##NM_003064|SLPI|6590|secretory leukocyte peptidase inhibitor##BC005262|SEMG2|6407|semenogelin II##M81652|SEMG2|6407|semenogelin II##NM_003008|SEMG2|6407|semenogelin II##AK312932|SEMG2|6407|semenogelin II##BC056675|SEMG2|6407|semenogelin II##BC070306|SEMG2|6407|semenogelin II##NM_003007|SEMG1|6406|semenogelin I##BC005229|SEMG1|6406|semenogelin I##BC007096|SEMG1|6406|semenogelin I##BC011442|SEMG1|6406|semenogelin I##BC055416|SEMG1|6406|semenogelin I##J04440|SEMG1|6406|semenogelin I##BT007177|SEMG1|6406|semenogelin I##NM_014276|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB024964|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB026048|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB027710|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##BC151219|MATN4|8785|matrilin 4##AK074595|MATN4|8785|matrilin 4##BC141811|MATN4|8785|matrilin 4##AK074597|MATN4|8785|matrilin 4##NM_003833|MATN4|8785|matrilin 4##NM_030590|MATN4|8785|matrilin 4##NM_030592|MATN4|8785|matrilin 4##CR542045|SDC4|6385|syndecan 4##CR542074|SDC4|6385|syndecan 4##DQ890718|SDC4|6385|syndecan 4##DQ893898|SDC4|6385|syndecan 4##X67016|SDC4|6385|syndecan 4##AK222695|SDC4|6385|syndecan 4##AK223243|SDC4|6385|syndecan 4##AK303964|SDC4|6385|syndecan 4##AK312507|SDC4|6385|syndecan 4##BC030805|SDC4|6385|syndecan 4##D13292|SDC4|6385|syndecan 4##NM_002999|SDC4|6385|syndecan 4	0.99662	CTCF.p2:8:0.997
chr6	37709878	37709999	reg1013519.p2	9.352	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	-44232	-	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-242242	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-242286	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	77352	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	77752	+	BC101354 BC101355 BC101356 BC101357 AK057507 NM_001172418 NM_152733	853864	-	AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3##BC101354|BTBD9|114781|BTB (POZ) domain containing 9##BC101355|BTBD9|114781|BTB (POZ) domain containing 9##BC101356|BTBD9|114781|BTB (POZ) domain containing 9##BC101357|BTBD9|114781|BTB (POZ) domain containing 9##AK057507|BTBD9|114781|BTB (POZ) domain containing 9##NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9##NM_152733|BTBD9|114781|BTB (POZ) domain containing 9	0.917595	CTCF.p2:0:0.918
chr6_cox_hap2	2675212	2675331	reg1015686.p1	9.352	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.998737	CTCF.p2:2:0.999
chr1	154171631	154171765	reg1015398.p1	9.351	+	X04201 TSC_hg19_v1_chr1_-_154164580 BC062740 AK092690 AX747672 BC008407 BC008425 AK056997 NM_152263	-7119	-	TSC_hg19_v1_chr1_-_154155705 AK298678 NM_001043351 NM_001043352 NM_001043353 NM_153649	-15987	-	TSC_hg19_v1_chr1_-_154155685 AK308007	-16008	-	HQ258701 NM_001010979 BC127710 BC130509	7142	-	D63478 NM_001127320	20956	+	AF529365 CR457131 DQ908899 CU674064 CU678913 AF109185 BC008306 BC014391 TSC_hg19_v1_chr1_-_154193035 AJ243664 BC001377	21263	-	X04201|TPM3|7170|tropomyosin 3##BC062740|TPM3|7170|tropomyosin 3##AK092690|TPM3|7170|tropomyosin 3##BC008407|TPM3|7170|tropomyosin 3##BC008425|TPM3|7170|tropomyosin 3##AK056997|TPM3|7170|tropomyosin 3##NM_152263|TPM3|7170|tropomyosin 3##AK298678|TPM3|7170|tropomyosin 3##NM_001043351|TPM3|7170|tropomyosin 3##NM_001043352|TPM3|7170|tropomyosin 3##NM_001043353|TPM3|7170|tropomyosin 3##NM_153649|TPM3|7170|tropomyosin 3##AK308007|TPM3|7170|tropomyosin 3##HQ258701|C1orf189|388701|chromosome 1 open reading frame 189##NM_001010979|C1orf189|388701|chromosome 1 open reading frame 189##BC127710|C1orf189|388701|chromosome 1 open reading frame 189##BC130509|C1orf189|388701|chromosome 1 open reading frame 189##D63478|UBAP2L|9898|ubiquitin associated protein 2-like##NM_001127320|UBAP2L|9898|ubiquitin associated protein 2-like##AF529365|C1orf43|25912|chromosome 1 open reading frame 43##CR457131|C1orf43|25912|chromosome 1 open reading frame 43##DQ908899|C1orf43|25912|chromosome 1 open reading frame 43##AF109185|C1orf43|25912|chromosome 1 open reading frame 43##BC008306|C1orf43|25912|chromosome 1 open reading frame 43##BC014391|C1orf43|25912|chromosome 1 open reading frame 43##AJ243664|C1orf43|25912|chromosome 1 open reading frame 43##BC001377|C1orf43|25912|chromosome 1 open reading frame 43	0.145025	
chr17	16331515	16331636	reg1015210.p1	9.351	+	TSC_hg19_v1_chr17_+_16319096 AF103906	-12470	+	TSC_hg19_v1_chr17_+_16318917 AK001896	-12657	+	TSC_hg19_v1_chr17_+_16318881 AK289705 NM_016113 BC018926 BC051305	-12702	+	TSC_hg19_v1_chr17_+_16342350 AK098643 AK307982 AK308482 AK309961 BX538291 AK311247 BC027986 BC040159	10785	+	TSC_hg19_v1_chr17_-_16395091 AK093015 AX747857 BC144381	63578	-	NM_001113567 NM_207387 TSC_hg19_v1_chr17_-_16395510	63932	-	AF103906|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AK001896|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AK289705|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##NM_016113|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##BC018926|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##BC051305|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AK098643|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK307982|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK308482|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK309961|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##BX538291|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK311247|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##BC027986|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##BC040159|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK093015|FAM211A|388341|family with sequence similarity 211, member A##BC144381|FAM211A|388341|family with sequence similarity 211, member A##NM_001113567|FAM211A|388341|family with sequence similarity 211, member A##NM_207387|FAM211A|388341|family with sequence similarity 211, member A	0.922451	CTCF.p2:1:0.922
chr2	8665738	8665864	reg1013456.p1	9.351	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1608214	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1647938	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1659098	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	156402	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	311918	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	478020	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.256541	CTCF.p2:-42:0.257
chr6	44561314	44561448	reg1014468.p1	9.350	+	TSC_hg19_v1_chr6_+_44355461 AK128737 AK299738 BC001568 AB007892 AB590067 CU674768 DQ891623 DQ894814 U86753	-205881	+	NM_001253 TSC_hg19_v1_chr6_+_44355294	-206109	+	NM_145026 AK058171	-250941	+	NM_001015051 NM_001024630 AF053952	734675	+	AF073930 NM_003599 TSC_hg19_v1_chr6_-_45345614 AK303838 BC035816 BC050384 NM_181356 AK313874	784294	-	TSC_hg19_v1_chr6_+_45389825 NM_004348	828484	+	AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_001253|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_145026|SPATS1|221409|spermatogenesis associated, serine-rich 1##AK058171|SPATS1|221409|spermatogenesis associated, serine-rich 1##NM_001015051|RUNX2|860|runt-related transcription factor 2##NM_001024630|RUNX2|860|runt-related transcription factor 2##AF053952|RUNX2|860|runt-related transcription factor 2##AF073930|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_003599|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK303838|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC035816|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC050384|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_181356|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK313874|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_004348|RUNX2|860|runt-related transcription factor 2	0.999586	CTCF.p2:2:1.000
chrX	147131094	147131225	reg1014363.p1	9.350	+	BC034320 NM_152578 AY211917 AK098602	-68304	+	TSC_hg19_v1_chrX_+_146993685 CU691632	-137466	+	BC038998 TSC_hg19_v1_chrX_+_146993559	-137608	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	451029	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	669453	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	1455615	-	BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##BC038998|FMR1|2332|fragile X mental retardation 1##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase	0.990941	CTCF.p2:-8:0.991
chr12	75954095	75954231	reg1015229.p1	9.349	+	BC005225 TSC_hg19_v1_chr12_-_75905414 NM_007043	-48744	-	BC033887 TSC_hg19_v1_chr12_-_75905393 BC014034 BC026107	-48768	-	AK022133 TSC_hg19_v1_chr12_-_75905382 BC016778 U55766	-48778	-	AF220656 TSC_hg19_v1_chr12_-_76424608	470384	-	TSC_hg19_v1_chr12_-_76425369 BC126425 BC130427 BC110820 U92983 BC018929	471127	-	TSC_hg19_v1_chr12_-_76425376 AK304224 AB587598 NM_007350 Z50194	471364	-	BC005225|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##NM_007043|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC033887|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC014034|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC026107|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK022133|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC016778|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##U55766|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AF220656|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC126425|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC130427|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC110820|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##U92983|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC018929|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##AK304224|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##NM_007350|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##Z50194|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1	0.057491	
chr20	10517231	10517378	reg1016146.p1	9.349	+	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-101328	+	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	-102465	-	AF221993 NM_018848	-104735	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	136900	-	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	137265	-	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1354145	+	BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3	0.988163	CTCF.p2:-7:0.988
chr19	12248486	12248595	reg1012643.p2	9.348	+	AK128700 TSC_hg19_v1_chr19_+_12203111 AK124155	-45427	+	AK299732 AL832297 AK098117 NM_001136501 BC125185 BC125186 TSC_hg19_v1_chr19_+_12175767	-72900	+	NM_001080404	-84759	-	AL080125 AK023094 BC036714 TSC_hg19_v1_chr19_-_12251166 NM_001203250 NM_021143	2616	-	BC007868 AK096560 AK292455 NM_145233 TSC_hg19_v1_chr19_-_12267555	19006	-	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	25369	+	AK128700|ZNF788|388507|zinc finger family member 788##AK299732|ZNF844|284391|zinc finger protein 844##AL832297|ZNF844|284391|zinc finger protein 844##AK098117|ZNF844|284391|zinc finger protein 844##NM_001136501|ZNF844|284391|zinc finger protein 844##BC125185|ZNF844|284391|zinc finger protein 844##BC125186|ZNF844|284391|zinc finger protein 844##NM_001080404|ZNF878|729747|zinc finger protein 878##AL080125|ZNF20|7568|zinc finger protein 20##AK023094|ZNF20|7568|zinc finger protein 20##BC036714|ZNF20|7568|zinc finger protein 20##NM_001203250|ZNF20|7568|zinc finger protein 20##NM_021143|ZNF20|7568|zinc finger protein 20##BC007868|ZNF625|90589|zinc finger protein 625##AK096560|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##AK292455|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##NM_145233|ZNF625|90589|zinc finger protein 625##NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136	0.569553	CTCF.p2:0:0.371
chr6	110778916	110779041	reg1015605.p1	9.348	+	TSC_hg19_v1_chr6_-_110736760 BC032786 NM_003649 NM_004032 AK293029	-42214	-	NM_001123364	-99504	-	TSC_hg19_v1_chr6_+_110501629 AF038392 NM_015891 BC117145 BC126114 AK314601 AK222721 BC018059 AK295055 AB528038 HQ258473 AB208903 AF061241 AF015044	-277355	+	BC012014 AF268892 AY145502 BC037247 TSC_hg19_v1_chr6_-_110797794	18810	-	TSC_hg19_v1_chr6_-_110797817 AK304546	18840	-	TSC_hg19_v1_chr6_-_110797837 BC047565 NM_033125	18885	-	BC032786|DDO|8528|D-aspartate oxidase##NM_003649|DDO|8528|D-aspartate oxidase##NM_004032|DDO|8528|D-aspartate oxidase##AK293029|DDO|8528|D-aspartate oxidase##NM_001123364|C6orf186|728464|chromosome 6 open reading frame 186##AF038392|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##NM_015891|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC117145|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC126114|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK314601|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK222721|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK295055|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##HQ258473|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AB208903|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AF061241|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AF015044|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC012014|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AF268892|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AY145502|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC037247|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304546|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC047565|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##NM_033125|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16	0.830068	CTCF.p2:-12:0.830
chr7	137501647	137501793	reg1014619.p1	9.348	+	BC005916 TSC_hg19_v1_chr7_-_137028543 NM_002825 M57399	-473165	-	X52946 TSC_hg19_v1_chr7_-_137028443 AK313424	-473279	-	TSC_hg19_v1_chr7_-_137028371 AK290488	-473347	-	TSC_hg19_v1_chr7_-_137531587 NM_004717	29876	-	TSC_hg19_v1_chr7_+_137531690 BC047556	30012	+	TSC_hg19_v1_chr7_-_137620668 BC015585	118942	-	BC005916|PTN|5764|pleiotrophin##NM_002825|PTN|5764|pleiotrophin##M57399|PTN|5764|pleiotrophin##X52946|PTN|5764|pleiotrophin##AK313424|PTN|5764|pleiotrophin##AK290488|PTN|5764|pleiotrophin##NM_004717|DGKI|9162|diacylglycerol kinase, iota##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.913875	CTCF.p2:-13:0.914
chr9	75798948	75799092	reg1013468.p2	9.347	+	TSC_hg19_v1_chr9_+_75766797 BC001275	-32217	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	-32242	+	NM_000689	-230788	-	NM_006914 BC051830 Y08639	1313254	+	AY333284 NM_001177311	1703242	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	1703714	-	BC001275|ANXA1|301|annexin A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B##AY333284|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177311|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	0.998954	CTCF.p2:7:0.999
chr3	113871387	113871528	reg1011533.p1	9.346	+	TSC_hg19_v1_chr3_+_113775661 AK023022	-95783	+	TSC_hg19_v1_chr3_+_113775628 AK299313 BC039265 NM_024638 AL833709 AK296938	-95851	+	AK125304 AK295855 AK302488 BC150592 AF509494 NM_020817	-96046	-	AY228457 AY228458 NM_000796 NM_033663 AY228454	26459	-	NM_007136 X65233	84967	-	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	141396	+	AK023022|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AK299313|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##BC039265|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##NM_024638|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AL833709|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AK296938|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AK125304|KIAA1407|57577|KIAA1407##AK295855|KIAA1407|57577|KIAA1407##AK302488|KIAA1407|57577|KIAA1407##BC150592|KIAA1407|57577|KIAA1407##AF509494|KIAA1407|57577|KIAA1407##NM_020817|KIAA1407|57577|KIAA1407##AY228457|DRD3|1814|dopamine receptor D3##AY228458|DRD3|1814|dopamine receptor D3##NM_000796|DRD3|1814|dopamine receptor D3##NM_033663|DRD3|1814|dopamine receptor D3##AY228454|DRD3|1814|dopamine receptor D3##NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	0.814711	CTCF.p2:-4:0.795
chr6	52272319	52272430	reg1014677.p1	9.346	+	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	-45417	+	TSC_hg19_v1_chr6_-_52149551 D38073 AK299566 NM_002388 AK301704	-122795	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	-122854	-	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	12704	+	AK297632 NM_001172420	13430	+	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	169384	-	NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##D38073|MCM3|4172|minichromosome maintenance complex component 3##AK299566|MCM3|4172|minichromosome maintenance complex component 3##NM_002388|MCM3|4172|minichromosome maintenance complex component 3##AK301704|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3##NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2	0.58696	CTCF.p2:8:0.587
chr8	25333322	25333420	reg1013097.p2	9.346	+	TSC_hg19_v1_chr8_+_25316748 AK299278 AL833627 BC015691 BC104450 BC104451	-16537	+	AK292505 TSC_hg19_v1_chr8_+_25316724	-16649	+	NM_152562	-16859	+	BC137106 BC137107 NM_022659 TSC_hg19_v1_chr8_-_25902675 AK001144	569295	-	TSC_hg19_v1_chr8_+_26149035 NM_002717	815650	+	AK314823 TSC_hg19_v1_chr8_+_26149043 BC041071	815678	+	AK299278|CDCA2|157313|cell division cycle associated 2##AL833627|CDCA2|157313|cell division cycle associated 2##BC015691|CDCA2|157313|cell division cycle associated 2##BC104450|CDCA2|157313|cell division cycle associated 2##BC104451|CDCA2|157313|cell division cycle associated 2##AK292505|CDCA2|157313|cell division cycle associated 2##NM_152562|CDCA2|157313|cell division cycle associated 2##BC137106|EBF2|64641|early B-cell factor 2##BC137107|EBF2|64641|early B-cell factor 2##NM_022659|EBF2|64641|early B-cell factor 2##AK001144|EBF2|64641|early B-cell factor 2##NM_002717|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AK314823|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##BC041071|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha	0.485594	CTCF.p2:3:0.473
chr11	118042470	118042600	reg1014872.p1	9.345	+	AY149967 AK314531 NM_001142348 NM_174934	-18954	-	TSC_hg19_v1_chr11_-_118016149 BC035017 NM_001142349	-26377	-	BC004855 TSC_hg19_v1_chr11_+_117947792 AK308434 AK296855 AK303173 AK290361 AK304215 AF179224 AY358530 AF216312 BC011703 AK172766	-94708	+	AF007783 BT019487 DQ892426 DQ892634 DQ895640 U87555 AY358945 BC036793 AF049498 AK308834 AK313891 TSC_hg19_v1_chr11_-_118047330	4702	-	NM_004588 TSC_hg19_v1_chr11_-_118047340	4807	-	AK094399 NM_153206	41538	-	AY149967|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##AK314531|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_001142348|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_174934|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##BC035017|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_001142349|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##BC004855|TMPRSS4|56649|transmembrane protease, serine 4##AK308434|TMPRSS4|56649|transmembrane protease, serine 4##AK296855|TMPRSS4|56649|transmembrane protease, serine 4##AK303173|TMPRSS4|56649|transmembrane protease, serine 4##AK290361|TMPRSS4|56649|transmembrane protease, serine 4##AK304215|TMPRSS4|56649|transmembrane protease, serine 4##AF179224|TMPRSS4|56649|transmembrane protease, serine 4##AY358530|TMPRSS4|56649|transmembrane protease, serine 4##AF216312|TMPRSS4|56649|transmembrane protease, serine 4##BC011703|TMPRSS4|56649|transmembrane protease, serine 4##AK172766|TMPRSS4|56649|transmembrane protease, serine 4##AF007783|SCN2B|6327|sodium channel, voltage-gated, type II, beta##BT019487|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ892426|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ892634|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ895640|SCN2B|6327|sodium channel, voltage-gated, type II, beta##U87555|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AY358945|SCN2B|6327|sodium channel, voltage-gated, type II, beta##BC036793|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AF049498|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK308834|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK313891|SCN2B|6327|sodium channel, voltage-gated, type II, beta##NM_004588|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1	1.027121	CTCF.p2:-15:0.998
chr11	81498661	81498772	reg1013312.p2	9.345	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-2346992	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-3212821	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-3212924	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	946182	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	1112801	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	1114058	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.744801	CTCF.p2:0:0.745
chr1	234733788	234733931	reg1012916.p2	9.345	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	-118999	-	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	-224487	+	TSC_hg19_v1_chr1_+_234350005 BC037878	-383853	+	TSC_hg19_v1_chr1_-_234743489 BC020516	9667	-	TSC_hg19_v1_chr1_-_234743841 AK299768	9972	-	TSC_hg19_v1_chr1_-_234743861 AK309579	9999	-	NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##BC037878|SLC35F3|148641|solute carrier family 35, member F3##BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2	0.710696	CTCF.p2:-2:0.711
chr5	147329422	147329537	reg1013136.p1	9.345	+	AY358656 AK289403 BC021680 NM_206966	-43397	-	BC024232 NM_054023 AF439545 AY358979 AF313455 AB590291 DQ893093 DQ896365	-71160	+	TSC_hg19_v1_chr5_-_147211236 NM_003122	-118232	-	DQ149927 DQ149928 DQ149929 NM_001127698 NM_001127699 NM_006846 AK299455 AK307588 AK309753 AK301660 AK307648 AJ228139 AB463250	114091	+	NM_001001325	219816	+	GQ504704 NM_001195290 NM_205841 GQ504705 BC032003	252891	+	AY358656|C5orf46|389336|chromosome 5 open reading frame 46##AK289403|C5orf46|389336|chromosome 5 open reading frame 46##BC021680|C5orf46|389336|chromosome 5 open reading frame 46##NM_206966|C5orf46|389336|chromosome 5 open reading frame 46##BC024232|SCGB3A2|117156|secretoglobin, family 3A, member 2##NM_054023|SCGB3A2|117156|secretoglobin, family 3A, member 2##AF439545|SCGB3A2|117156|secretoglobin, family 3A, member 2##AY358979|SCGB3A2|117156|secretoglobin, family 3A, member 2##AF313455|SCGB3A2|117156|secretoglobin, family 3A, member 2##DQ893093|SCGB3A2|117156|secretoglobin, family 3A, member 2##DQ896365|SCGB3A2|117156|secretoglobin, family 3A, member 2##NM_003122|SPINK1|6690|serine peptidase inhibitor, Kazal type 1##DQ149927|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##DQ149928|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##DQ149929|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##NM_001127698|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##NM_001127699|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##NM_006846|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK299455|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK307588|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK309753|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK301660|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK307648|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AJ228139|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##NM_001001325|SPINK14|408187|serine peptidase inhibitor, Kazal type 14 (putative)##GQ504704|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##NM_001195290|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##NM_205841|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##GQ504705|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##BC032003|SPINK6|404203|serine peptidase inhibitor, Kazal type 6	0.958505	CTCF.p2:-10:0.959
chr12	71786457	71786570	reg1013199.p1	9.344	+	BC005246 NM_004616	-234735	-	AK223022 TSC_hg19_v1_chr12_-_71551590 AK313112	-234922	-	TSC_hg19_v1_chr12_-_71314519 D64053 NM_002849	-471965	-	TSC_hg19_v1_chr12_+_71833577 AK294985 AK315133	47037	+	TSC_hg19_v1_chr12_+_71833761 AK075399 AF062006 FN820440 NM_003667 BC096324 BC096325 BC096326 BC099650 AF061444	47297	+	AB385347 CU677389 TSC_hg19_v1_chr12_-_72057432	270897	-	BC005246|TSPAN8|7103|tetraspanin 8##NM_004616|TSPAN8|7103|tetraspanin 8##AK223022|TSPAN8|7103|tetraspanin 8##AK313112|TSPAN8|7103|tetraspanin 8##D64053|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##NM_002849|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##AK294985|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AK315133|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AK075399|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AF062006|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##FN820440|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##NM_003667|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096324|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096325|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096326|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC099650|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AF061444|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5	0.512339	CTCF.p2:1:0.512
chr3	178154624	178154763	reg1013272.p2	9.344	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1239634	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	-1239742	-	TSC_hg19_v1_chr3_-_176914267 BX648935	-1240443	-	BC017825 NM_181361	99530	+	AF209747 NM_005832	121859	+	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	634872	-	AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3	0.993353	CTCF.p2:-18:0.993
chr8	30015204	30015339	reg1015015.p1	9.344	+	D84145 NM_006571 TSC_hg19_v1_chr8_+_30013882 AK314128 BC013175 CR456851	-1416	+	NM_001100916 EU518495	-13071	-	TSC_hg19_v1_chr8_+_29952989 AK075363 AF161461 DQ891897 DQ895083 CR541735 CR541760	-62272	+	Z36874 TSC_hg19_v1_chr8_+_30209759	194466	+	NM_001008710 NM_001008711 NM_001008712 NM_006867 AK304858 D84107 D84108 D84109 D84110 TSC_hg19_v1_chr8_+_30242056 BC003608	226738	+	NM_001206847	480845	+	D84145|DCTN6|10671|dynactin 6##NM_006571|DCTN6|10671|dynactin 6##AK314128|DCTN6|10671|dynactin 6##BC013175|DCTN6|10671|dynactin 6##CR456851|DCTN6|10671|dynactin 6##NM_001100916|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##EU518495|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing##NM_006867|RBPMS|11030|RNA binding protein with multiple splicing##AK304858|RBPMS|11030|RNA binding protein with multiple splicing##D84107|RBPMS|11030|RNA binding protein with multiple splicing##D84108|RBPMS|11030|RNA binding protein with multiple splicing##D84109|RBPMS|11030|RNA binding protein with multiple splicing##D84110|RBPMS|11030|RNA binding protein with multiple splicing##BC003608|RBPMS|11030|RNA binding protein with multiple splicing##NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341	0.86069	CTCF.p2:20:0.861
chr10	99167039	99167148	reg1003609.p1	9.343	+	TSC_hg19_v1_chr10_-_99161098 AB014590 BC012745 AK022496 NM_001145114 NM_015179	-6018	-	TSC_hg19_v1_chr10_-_99160995 CU680388 AK296315	-6102	-	TSC_hg19_v1_chr10_-_99094476 BC020165 AB045118 NM_012083	-72640	-	TSC_hg19_v1_chr10_-_99185702 BC009463	18655	-	TSC_hg19_v1_chr10_+_99185978 AK292216	18892	+	TSC_hg19_v1_chr10_+_99186011 AK297491	18914	+	AB014590|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##BC012745|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##AK022496|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##NM_001145114|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##NM_015179|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##AK296315|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##BC020165|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2##AB045118|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2##NM_012083|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2##AK292216|PGAM1|5223|phosphoglycerate mutase 1 (brain)##AK297491|PGAM1|5223|phosphoglycerate mutase 1 (brain)	0.786052	CTCF.p2:-6:0.786
chr18	64772065	64772163	reg1013071.p1	9.343	+	AJ007607 NM_021153 AK304000 AK315257 BC015877	-500803	-	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-1353912	+	TSC_hg19_v1_chr18_+_63417845 BC036786	-1354248	+	AK021849 TSC_hg19_v1_chr18_-_65182656	410469	-	TSC_hg19_v1_chr18_-_65183956 NM_032160	411832	-	AM393206 AM393295 CU689334 TSC_hg19_v1_chr18_-_66382307 AK307269 AK295551 BC032325 AL832341 AL832356 BC093792 BC093794 BC143400 AB058733	1610152	-	AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AK021849|DSEL|92126|dermatan sulfate epimerase-like##NM_032160|DSEL|92126|dermatan sulfate epimerase-like##AM393206|TMX3|54495|thioredoxin-related transmembrane protein 3##AM393295|TMX3|54495|thioredoxin-related transmembrane protein 3##AK307269|TMX3|54495|thioredoxin-related transmembrane protein 3##AK295551|TMX3|54495|thioredoxin-related transmembrane protein 3##BC032325|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832341|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832356|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093792|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093794|TMX3|54495|thioredoxin-related transmembrane protein 3##BC143400|TMX3|54495|thioredoxin-related transmembrane protein 3##AB058733|TMX3|54495|thioredoxin-related transmembrane protein 3	0.994505	CTCF.p2:0:0.995
chr22	31627256	31627379	reg1013348.p1	9.343	+	TSC_hg19_v1_chr22_+_31608285 CR456513 CU013112 CU013400 AB587469 AB451269 AB451396	-18970	+	AK291640 D45906 TSC_hg19_v1_chr22_+_31608280	-19037	+	NM_005569 TSC_hg19_v1_chr22_+_31608257 AK093554 AX748198	-19061	+	AK299112 TSC_hg19_v1_chr22_+_31644324 NM_001031801 NM_016733	17013	+	TSC_hg19_v1_chr22_+_31644372 AK314391 AK293774 AL117466 D85527 BC013051	17103	+	TSC_hg19_v1_chr22_-_31686709 BC041903 AK093768	59406	-	CR456513|LIMK2|3985|LIM domain kinase 2##CU013112|LIMK2|3985|LIM domain kinase 2##CU013400|LIMK2|3985|LIM domain kinase 2##AB451269|LIMK2|3985|LIM domain kinase 2##AB451396|LIMK2|3985|LIM domain kinase 2##AK291640|LIMK2|3985|LIM domain kinase 2##D45906|LIMK2|3985|LIM domain kinase 2##NM_005569|LIMK2|3985|LIM domain kinase 2##AK093554|LIMK2|3985|LIM domain kinase 2##AK299112|LIMK2|3985|LIM domain kinase 2##NM_001031801|LIMK2|3985|LIM domain kinase 2##NM_016733|LIMK2|3985|LIM domain kinase 2##AK314391|LIMK2|3985|LIM domain kinase 2##AK293774|LIMK2|3985|LIM domain kinase 2##AL117466|LIMK2|3985|LIM domain kinase 2##D85527|LIMK2|3985|LIM domain kinase 2##BC013051|LIMK2|3985|LIM domain kinase 2##BC041903|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK093768|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1	0.735821	CTCF.p2:18:0.736
chr20	40363194	40363326	reg1015183.p1	9.342	+	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-116199	-	AB089149 NM_052846	-367763	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	-393745	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	1455250	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	1723232	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	1723343	+	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3##AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6	0.997354	CTCF.p2:-2:0.997
chr6	149838705	149838848	reg1013215.p2	9.342	+	TSC_hg19_v1_chr6_-_149806151 AB458221 AB458222 BC157832 NM_207360	-32633	-	TSC_hg19_v1_chr6_-_149806031 AK127932	-32709	-	AY340238 NM_001002255 BC130305 HQ258040	-117268	+	TSC_hg19_v1_chr6_-_149867153 CU676802 GQ129364 GQ129365 BC064134	28368	-	TSC_hg19_v1_chr6_-_149867172 AF357880 AK092069 AX747342 BX537536 BC107684	28391	-	BC020986 TSC_hg19_v1_chr6_-_149867195 AK315388 NM_139126	28429	-	AB458221|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AB458222|ZC3H12D|340152|zinc finger CCCH-type containing 12D##BC157832|ZC3H12D|340152|zinc finger CCCH-type containing 12D##NM_207360|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AK127932|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##GQ129364|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##GQ129365|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC064134|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AF357880|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AK092069|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BX537536|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC107684|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC020986|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AK315388|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##NM_139126|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4	0.0	
chr11	37967842	37967992	reg1015435.p1	9.341	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-1348115	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-1351813	+	NM_000448 M29474	-1378349	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	2346677	-	AB046800 NM_020929	2347746	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	5365601	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.761973	CTCF.p2:0:0.762
chr17	48192394	48192502	reg1014056.p1	9.341	+	TSC_hg19_v1_chr17_+_48172739 NM_001199900 NM_002611 AK297089 BC040478 BC063137 AK290522 AK293600 BC005811 L42451 NM_001199899	-19638	+	AK055119 NM_001199898	-20348	+	TSC_hg19_v1_chr17_+_48133357 AB209658 BC150190 BC015344	-59002	+	TSC_hg19_v1_chr17_-_48207145 BC142728 BC136485 AY148482 NM_174920 AK291482 AK094209 AK225767 BC141822	14701	-	AJ401189 NM_032595 TSC_hg19_v1_chr17_-_48227977	35478	-	AK300710 TSC_hg19_v1_chr17_+_48243372 L34355 L35853 L46810 NM_000023 NM_001135697 AK293614 AK290622 BC025702 U08895 AB464188 DQ893777 CU693018	50934	+	NM_001199900|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_002611|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK297089|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC040478|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC063137|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK290522|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK293600|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC005811|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##L42451|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199899|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK055119|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199898|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AB209658|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC150190|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC015344|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC142728|SAMD14|201191|sterile alpha motif domain containing 14##BC136485|SAMD14|201191|sterile alpha motif domain containing 14##AY148482|SAMD14|201191|sterile alpha motif domain containing 14##NM_174920|SAMD14|201191|sterile alpha motif domain containing 14##AK291482|SAMD14|201191|sterile alpha motif domain containing 14##AK094209|SAMD14|201191|sterile alpha motif domain containing 14##AK225767|SAMD14|201191|sterile alpha motif domain containing 14##BC141822|SAMD14|201191|sterile alpha motif domain containing 14##AJ401189|PPP1R9B|84687|protein phosphatase 1, regulatory subunit 9B##NM_032595|PPP1R9B|84687|protein phosphatase 1, regulatory subunit 9B##AK300710|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L34355|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L35853|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L46810|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##NM_000023|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##NM_001135697|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##AK290622|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##BC025702|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##U08895|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##DQ893777|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)	0.774175	CTCF.p2:-9:0.774
chr4	73168981	73169095	reg1014246.p1	9.341	+	AK290937 NM_001144756 NM_053036 AF236083	-264168	+	AF119815 NM_004885 AK308069 AJ311393	-271469	+	AK223458 NM_001204306	-497802	-	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	265453	-	BC101684 BC143642 TSC_hg19_v1_chr4_-_73935431 AK096310 AY957564 AY957565 BC071812 NM_173827	766405	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	919741	-	AK290937|NPFFR2|10886|neuropeptide FF receptor 2##NM_001144756|NPFFR2|10886|neuropeptide FF receptor 2##NM_053036|NPFFR2|10886|neuropeptide FF receptor 2##AF236083|NPFFR2|10886|neuropeptide FF receptor 2##AF119815|NPFFR2|10886|neuropeptide FF receptor 2##NM_004885|NPFFR2|10886|neuropeptide FF receptor 2##AK308069|NPFFR2|10886|neuropeptide FF receptor 2##AJ311393|NPFFR2|10886|neuropeptide FF receptor 2##AK223458|GC|2638|group-specific component (vitamin D binding protein)##NM_001204306|GC|2638|group-specific component (vitamin D binding protein)##AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC101684|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC143642|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK096310|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957564|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957565|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC071812|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_173827|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17	0.999841	CTCF.p2:-14:1.000
chr5	112331859	112331973	reg1013855.p2	9.341	+	TSC_hg19_v1_chr5_+_112312506 AY135173 AY146650 BC017965 AK296361 AK090564 AX746512 BC064593 BC068042 CU687920	-19388	+	TSC_hg19_v1_chr5_+_112312407 NM_001242377 NM_152624	-19511	+	CU688102 AY562243 BC065926 TSC_hg19_v1_chr5_-_112257925 BC000232 M74090 AK295436 AK298268 AK299902 AK300048 AK312522 M73547 AX775929 BX648005 NM_005669	-73929	-	M62397 AK096212 TSC_hg19_v1_chr5_-_112630346	298409	-	TSC_hg19_v1_chr5_-_112630624 BC009279 BC018919 NM_002387 AK300259	298693	-	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	438716	-	AY135173|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY146650|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC017965|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK296361|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK090564|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC064593|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC068042|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##NM_001242377|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##NM_152624|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY562243|REEP5|7905|receptor accessory protein 5##BC065926|REEP5|7905|receptor accessory protein 5##BC000232|REEP5|7905|receptor accessory protein 5##M74090|REEP5|7905|receptor accessory protein 5##AK295436|REEP5|7905|receptor accessory protein 5##AK298268|REEP5|7905|receptor accessory protein 5##AK299902|REEP5|7905|receptor accessory protein 5##AK312522|REEP5|7905|receptor accessory protein 5##BX648005|REEP5|7905|receptor accessory protein 5##NM_005669|REEP5|7905|receptor accessory protein 5##M62397|MCC|4163|mutated in colorectal cancers##AK096212|MCC|4163|mutated in colorectal cancers##BC009279|MCC|4163|mutated in colorectal cancers##BC018919|MCC|4163|mutated in colorectal cancers##NM_002387|MCC|4163|mutated in colorectal cancers##AK300259|MCC|4163|mutated in colorectal cancers##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B	0.7676	CTCF.p2:-8:0.675
chr6	50623687	50623803	reg1013378.p1	9.341	+	DQ012016 NM_001037498	-607382	-	DQ012014 DQ012015 NM_001037497 NM_001037728	-634075	-	DQ012017 NM_001037729	-686408	-	AY028376 NM_172238	57511	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	162790	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	1328650	-	DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##DQ012014|DEFB110|245913|defensin, beta 110 locus##DQ012015|DEFB110|245913|defensin, beta 110 locus##NM_001037497|DEFB110|245913|defensin, beta 110 locus##NM_001037728|DEFB110|245913|defensin, beta 110 locus##DQ012017|DEFB113|245927|defensin, beta 113##NM_001037729|DEFB113|245927|defensin, beta 113##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	0.960411	CTCF.p2:6:0.205	CTCF.p2:7:0.755
chr8	82783265	82783375	reg1012471.p1	9.341	+	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	-28847	-	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-138561	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-149794	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	2312139	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	2312223	+	TSC_hg19_v1_chr8_+_85095702 AK095026	2312415	+	AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like	0.744307	CTCF.p2:8:0.744
chr10	104107088	104107197	reg1012515.p1	9.340	+	TSC_hg19_v1_chr10_+_104005308 AF068755 D87435 BC117681 BC117682	-101775	+	NM_001199378 NM_001199379 NM_004193 BC057804 BC068543 TSC_hg19_v1_chr10_+_104005288 BC094763 AK025330 BC032543	-101863	+	BC011642 NM_005029	-105913	-	NM_001077493 TSC_hg19_v1_chr10_+_104154290 BC002844 NM_001077494 S76638	47148	+	NM_002502 X61498 X61499 TSC_hg19_v1_chr10_+_104155501 AK292654	48329	+	TSC_hg19_v1_chr10_-_104178575 BC037332	71430	-	AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199378|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199379|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC011642|PITX3|5309|paired-like homeodomain 3##NM_005029|PITX3|5309|paired-like homeodomain 3##NM_001077493|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC002844|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_001077494|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##S76638|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_002502|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61498|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61499|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##AK292654|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC037332|PSD|5662|pleckstrin and Sec7 domain containing	1.023383	CTCF.p2:25:0.963
chr11	124456285	124456388	reg1011414.p1	9.340	+	BC137194 BC137197 NM_001005194 AY726592	-16346	+	NM_001005195 BC136863 BC136864	-42775	-	AF238488 HQ258145 NM_012378 BC130393 BC130419	-145320	-	AB528788 AF406650 NM_052959	25115	+	TSC_hg19_v1_chr11_+_124492755 NM_032811 BC107428 AK074594 BC041043	36412	+	TSC_hg19_v1_chr11_+_124492765 AK222936	36427	+	BC137194|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1##BC137197|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1##NM_001005194|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1##AY726592|OR8A1|390275|olfactory receptor, family 8, subfamily A, member 1##NM_001005195|OR8B12|219858|olfactory receptor, family 8, subfamily B, member 12##BC136863|OR8B12|219858|olfactory receptor, family 8, subfamily B, member 12##BC136864|OR8B12|219858|olfactory receptor, family 8, subfamily B, member 12##AF238488|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##HQ258145|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##NM_012378|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##BC130393|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##BC130419|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##AF406650|PANX3|116337|pannexin 3##NM_052959|PANX3|116337|pannexin 3##NM_032811|TBRG1|84897|transforming growth factor beta regulator 1##BC107428|TBRG1|84897|transforming growth factor beta regulator 1##AK074594|TBRG1|84897|transforming growth factor beta regulator 1##BC041043|TBRG1|84897|transforming growth factor beta regulator 1##AK222936|TBRG1|84897|transforming growth factor beta regulator 1	0.999105	CTCF.p2:-19:0.999
chr10	120183460	120183606	reg1015457.p1	9.339	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	-81709	-	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	-377103	+	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	-377489	-	AK313269 AK290461 NM_004248	171625	-	CU691560 TSC_hg19_v1_chr10_-_120514298	330754	-	TSC_hg19_v1_chr10_-_120514483 AJ544771 AK097728	330978	-	AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A##BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AK313269|PRLHR|2834|prolactin releasing hormone receptor##AK290461|PRLHR|2834|prolactin releasing hormone receptor##NM_004248|PRLHR|2834|prolactin releasing hormone receptor##AJ544771|C10orf46|143384|chromosome 10 open reading frame 46##AK097728|C10orf46|143384|chromosome 10 open reading frame 46	0.988517	CTCF.p2:19:0.989
chr11	33564623	33564758	reg1014982.p1	9.339	+	TSC_hg19_v1_chr11_+_33563772 AK124395 NM_012194	-866	+	TSC_hg19_v1_chr11_+_33363104 AK304063	-201546	+	TSC_hg19_v1_chr11_+_33350077 AY425958	-214580	+	NM_001166692	157595	-	AK309894 NM_001127223 NM_001127225 NM_001127226	179582	-	NM_001127227	179807	-	AK124395|C11orf41|25758|chromosome 11 open reading frame 41##NM_012194|C11orf41|25758|chromosome 11 open reading frame 41##AK304063|HIPK3|10114|homeodomain interacting protein kinase 3##AY425958|HIPK3|10114|homeodomain interacting protein kinase 3##NM_001166692|C11orf91|100131378|chromosome 11 open reading frame 91##AK309894|CD59|966|CD59 molecule, complement regulatory protein##NM_001127223|CD59|966|CD59 molecule, complement regulatory protein##NM_001127225|CD59|966|CD59 molecule, complement regulatory protein##NM_001127226|CD59|966|CD59 molecule, complement regulatory protein##NM_001127227|CD59|966|CD59 molecule, complement regulatory protein	1.011335	CTCF.p2:3:0.999
chr19	3440212	3440343	reg1014383.p1	9.339	+	TSC_hg19_v1_chr19_+_3366607 X92857 AB590220 CU680224 DQ893655 DQ895795	-73662	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	-73697	+	TSC_hg19_v1_chr19_+_3366562 NM_001245002 NM_001245004 NM_005597 BC012120	-73722	+	CU680225 TSC_hg19_v1_chr19_-_3462913	22562	-	TSC_hg19_v1_chr19_-_3480524 BC146979 BC146984 NM_001136503	40249	-	BC002817 NM_031304 TSC_hg19_v1_chr19_-_3500673	60372	-	X92857|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ893655|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ895795|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245002|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245004|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_005597|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC012120|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC146979|C19orf77|284422|chromosome 19 open reading frame 77##BC146984|C19orf77|284422|chromosome 19 open reading frame 77##NM_001136503|C19orf77|284422|chromosome 19 open reading frame 77##BC002817|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase##NM_031304|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase	0.683014	CTCF.p2:10:0.683
chr2	226533478	226533584	reg1012236.p2	9.339	+	NM_020864 BC131727 AB040919	-267886	+	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	-626183	-	TSC_hg19_v1_chr2_-_225811768 EU236710	-721777	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	1129948	-	TSC_hg19_v1_chr2_-_227664534 S62539	1130968	-	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	1167199	+	NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##EU236710|DOCK10|55619|dedicator of cytokinesis 10##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##S62539|IRS1|3667|insulin receptor substrate 1##NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1	0.960003	CTCF.p2:-3:0.960
chr2	38104746	38104871	reg1012127.p2	9.339	+	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	-205419	-	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	-206029	-	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-532995	+	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	47624	+	BC024243 NM_001170792	51093	+	NM_001170793 NM_144713 AK057516 AF435956	72792	+	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1##BC024243|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1	0.986777	CTCF.p2:14:0.987
chr3	185378332	185378451	reg1012931.p1	9.339	+	AK304402 TSC_hg19_v1_chr3_+_185304106 AF151697 NM_021627 AK296772 AK027599 AK296744 BC040609 CU691906 AB037752 AB385449 AL834380	-74308	+	CU687970 TSC_hg19_v1_chr3_-_185270374 AK298380 AY036912 AY093498 EF186228 EF186229 BC064941 AK122651 NM_139248	-108063	-	TSC_hg19_v1_chr3_-_185216824 EU831805 EU831882 AK313954 BC019884 BC008043 BX647928 AY358547 AK172748 AK290878 NM_080652	-161692	-	CU676908 DQ892161 EU176689 TSC_hg19_v1_chr3_-_185542803 AK309611 AF117107 BC012322	164383	-	TSC_hg19_v1_chr3_-_185542828 BC021290 AK290664 NM_001007225 NM_006548	164440	-	AK091863 TSC_hg19_v1_chr3_-_185641735	263274	-	AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK298380|LIPH|200879|lipase, member H##AY036912|LIPH|200879|lipase, member H##AY093498|LIPH|200879|lipase, member H##EF186228|LIPH|200879|lipase, member H##EF186229|LIPH|200879|lipase, member H##BC064941|LIPH|200879|lipase, member H##AK122651|LIPH|200879|lipase, member H##NM_139248|LIPH|200879|lipase, member H##EU831805|TMEM41A|90407|transmembrane protein 41A##EU831882|TMEM41A|90407|transmembrane protein 41A##AK313954|TMEM41A|90407|transmembrane protein 41A##BC019884|TMEM41A|90407|transmembrane protein 41A##BC008043|TMEM41A|90407|transmembrane protein 41A##BX647928|TMEM41A|90407|transmembrane protein 41A##AY358547|TMEM41A|90407|transmembrane protein 41A##AK172748|TMEM41A|90407|transmembrane protein 41A##AK290878|TMEM41A|90407|transmembrane protein 41A##NM_080652|TMEM41A|90407|transmembrane protein 41A##DQ892161|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##EU176689|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK309611|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AF117107|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##BC021290|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK290664|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##NM_001007225|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##NM_006548|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK091863|TRA2B|6434|transformer 2 beta homolog (Drosophila)	0.998869	CTCF.p2:10:0.999
chr4	101017299	101017414	reg1014479.p1	9.339	+	TSC_hg19_v1_chr4_+_100871641 AK123926	-145710	+	TSC_hg19_v1_chr4_-_100871513 AK056803 NM_002106 BC103743	-145842	-	AY597416 BC018002 BC020936 D28450 TSC_hg19_v1_chr4_-_100871433	-145900	-	AL832277 BC013592 TSC_hg19_v1_chr4_-_101111626 AK312926 AK094236 NM_145244	94274	-	CU676062 AB590686 AB034695 AK222741 AK304568 AK291831 BC017781 AF205940 AK026875 AK313504 NM_001159694 NM_016242	421804	-	AB385587 AB451338 AB451487 AM393486 AM393713 CU693026 AY904364 BC025714 TSC_hg19_v1_chr4_-_102268080 L14778	1250670	-	AK123926|LOC256880|256880|uncharacterized LOC256880##AK056803|H2AFZ|3015|H2A histone family, member Z##NM_002106|H2AFZ|3015|H2A histone family, member Z##BC103743|H2AFZ|3015|H2A histone family, member Z##AY597416|H2AFZ|3015|H2A histone family, member Z##BC018002|H2AFZ|3015|H2A histone family, member Z##BC020936|H2AFZ|3015|H2A histone family, member Z##D28450|H2AFZ|3015|H2A histone family, member Z##AL832277|DDIT4L|115265|DNA-damage-inducible transcript 4-like##BC013592|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK312926|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK094236|DDIT4L|115265|DNA-damage-inducible transcript 4-like##NM_145244|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AB034695|EMCN|51705|endomucin##AK222741|EMCN|51705|endomucin##AK304568|EMCN|51705|endomucin##AK291831|EMCN|51705|endomucin##BC017781|EMCN|51705|endomucin##AF205940|EMCN|51705|endomucin##AK026875|EMCN|51705|endomucin##AK313504|EMCN|51705|endomucin##NM_001159694|EMCN|51705|endomucin##NM_016242|EMCN|51705|endomucin##AB451338|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AB451487|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393486|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393713|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AY904364|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##BC025714|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##L14778|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	0.543003	CTCF.p2:5:0.543
chr5	77833775	77833913	reg1015214.p1	9.339	+	TSC_hg19_v1_chr5_-_77806191 AK125227	-27648	-	D86961 BC136335 BC136336 AY309920 TSC_hg19_v1_chr5_-_77806179	-27790	-	NM_004866 TSC_hg19_v1_chr5_+_77656440 AF038966 AK304452 AK225172 BC009787 BC015065 AK298146 BC034048 AK290225 CR542286 CU677209	-177428	+	CR936660 TSC_hg19_v1_chr5_-_77845052	11179	-	TSC_hg19_v1_chr5_-_77944584 NM_005779	110722	-	J05225 TSC_hg19_v1_chr5_-_78281101	447244	-	AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##NM_004866|SCAMP1|9522|secretory carrier membrane protein 1##AF038966|SCAMP1|9522|secretory carrier membrane protein 1##AK304452|SCAMP1|9522|secretory carrier membrane protein 1##AK225172|SCAMP1|9522|secretory carrier membrane protein 1##BC009787|SCAMP1|9522|secretory carrier membrane protein 1##BC015065|SCAMP1|9522|secretory carrier membrane protein 1##AK298146|SCAMP1|9522|secretory carrier membrane protein 1##BC034048|SCAMP1|9522|secretory carrier membrane protein 1##AK290225|SCAMP1|9522|secretory carrier membrane protein 1##CR542286|SCAMP1|9522|secretory carrier membrane protein 1##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B	0.954191	CTCF.p2:-22:0.954
chr8	42315624	42315757	reg1015747.p1	9.339	+	TSC_hg19_v1_chr8_+_42249394 AK307224 AK058201 AK308760 BC056870 BC002456	-66279	+	TSC_hg19_v1_chr8_+_42249386 AF038962	-66303	+	NM_001135694 NM_005662 TSC_hg19_v1_chr8_+_42249355	-66372	+	NM_001135676	80607	+	TSC_hg19_v1_chr8_-_42396648 AK314774	80961	-	TSC_hg19_v1_chr8_+_42396791 NM_138436 BC013035 NM_001135674 NM_001135675	81137	+	AK307224|VDAC3|7419|voltage-dependent anion channel 3##AK058201|VDAC3|7419|voltage-dependent anion channel 3##AK308760|VDAC3|7419|voltage-dependent anion channel 3##BC056870|VDAC3|7419|voltage-dependent anion channel 3##AF038962|VDAC3|7419|voltage-dependent anion channel 3##NM_001135694|VDAC3|7419|voltage-dependent anion channel 3##NM_005662|VDAC3|7419|voltage-dependent anion channel 3##NM_001135676|C8orf40|114926|chromosome 8 open reading frame 40##AK314774|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##NM_138436|C8orf40|114926|chromosome 8 open reading frame 40##BC013035|C8orf40|114926|chromosome 8 open reading frame 40##NM_001135674|C8orf40|114926|chromosome 8 open reading frame 40##NM_001135675|C8orf40|114926|chromosome 8 open reading frame 40	0.0	
chr1	249219040	249219157	reg1013787.p1	9.338	+	TSC_hg19_v1_chr1_+_249200433 AK123219 BC063785 NM_001017434 NM_170725 BX647065 AK298248	-18675	+	TSC_hg19_v1_chr1_-_249153285 NM_001193328 NM_017865	-65796	-	AK309421 AL133100 TSC_hg19_v1_chr1_-_249153150 AK302187 NM_001136036 AK001070 AK298899 BC002948 AK000538 AK225535	-66010	-	None	None	None	None	None	None	None	None	None	AK123219|PGBD2|267002|piggyBac transposable element derived 2##BC063785|PGBD2|267002|piggyBac transposable element derived 2##NM_001017434|PGBD2|267002|piggyBac transposable element derived 2##NM_170725|PGBD2|267002|piggyBac transposable element derived 2##BX647065|PGBD2|267002|piggyBac transposable element derived 2##AK298248|PGBD2|267002|piggyBac transposable element derived 2##NM_001193328|ZNF692|55657|zinc finger protein 692##NM_017865|ZNF692|55657|zinc finger protein 692##AK309421|ZNF692|55657|zinc finger protein 692##AL133100|ZNF692|55657|zinc finger protein 692##AK302187|ZNF692|55657|zinc finger protein 692##NM_001136036|ZNF692|55657|zinc finger protein 692##AK001070|ZNF692|55657|zinc finger protein 692##AK298899|ZNF692|55657|zinc finger protein 692##BC002948|ZNF692|55657|zinc finger protein 692##AK000538|ZNF692|55657|zinc finger protein 692##AK225535|ZNF692|55657|zinc finger protein 692	0.976207	CTCF.p2:8:0.976
chr16	55876865	55876971	reg1011957.p1	9.338	+	BC110338 TSC_hg19_v1_chr16_-_55867027 AB119996 AB119995 BC012418 AK290623 AK292209 NM_001025194 NM_001025195 NM_001266	-9873	-	DQ891472 DQ894656 AK301651 AB025026 TSC_hg19_v1_chr16_-_55867009 M73499 S73751 AF177775 BC009706 AY268104 L07764	-9925	-	BC039309 NM_001172502 AK301811	-171316	+	AY907669 BC069548 BC069501 BC117126 BC143692 AK056109 NM_001143685 NM_145024	32326	-	AK294334 NM_001190158	113024	-	NM_020988 NM_138736 TSC_hg19_v1_chr16_+_56225253	348333	+	BC110338|CES1|1066|carboxylesterase 1##AB119996|CES1|1066|carboxylesterase 1##AB119995|CES1|1066|carboxylesterase 1##BC012418|CES1|1066|carboxylesterase 1##AK290623|CES1|1066|carboxylesterase 1##AK292209|CES1|1066|carboxylesterase 1##NM_001025194|CES1|1066|carboxylesterase 1##NM_001025195|CES1|1066|carboxylesterase 1##NM_001266|CES1|1066|carboxylesterase 1##DQ891472|CES1|1066|carboxylesterase 1##DQ894656|CES1|1066|carboxylesterase 1##AK301651|CES1|1066|carboxylesterase 1##AB025026|CES1|1066|carboxylesterase 1##M73499|CES1|1066|carboxylesterase 1##S73751|CES1|1066|carboxylesterase 1##AF177775|CES1|1066|carboxylesterase 1##BC009706|CES1|1066|carboxylesterase 1##AY268104|CES1|1066|carboxylesterase 1##L07764|CES1|1066|carboxylesterase 1##BC039309|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##NM_001172502|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##AK301811|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##AY907669|CES5A|221223|carboxylesterase 5A##BC069548|CES5A|221223|carboxylesterase 5A##BC069501|CES5A|221223|carboxylesterase 5A##BC117126|CES5A|221223|carboxylesterase 5A##BC143692|CES5A|221223|carboxylesterase 5A##AK056109|CES5A|221223|carboxylesterase 5A##NM_001143685|CES5A|221223|carboxylesterase 5A##NM_145024|CES5A|221223|carboxylesterase 5A##AK294334|CES5A|221223|carboxylesterase 5A##NM_001190158|CES5A|221223|carboxylesterase 5A##NM_020988|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_138736|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O	0.999657	CTCF.p2:10:1.000
chr2	171265682	171265804	reg1011851.p1	9.338	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	-231058	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-581785	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-584358	-	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	306115	+	TSC_hg19_v1_chr2_+_171571942 AB464708	306234	+	TSC_hg19_v1_chr2_+_171572707 BC069026	306967	+	AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##BC069026|SP5|389058|Sp5 transcription factor	0.999463	CTCF.p2:0:0.999
chr7	143434260	143434365	reg1012982.p1	9.338	+	NM_001130026 AK296318	-21362	+	BC113530 BC117233 NM_173678 AY167570 BC010225	-115770	+	BC041464 AK315909 NM_001130025 AK098041 AK297123 AL832734 BC033189	-116250	+	BC110410 BC043153 NM_178561	20494	-	AK299911 TSC_hg19_v1_chr7_-_143582416 NM_001206941	148102	-	TSC_hg19_v1_chr7_-_143599249 AB018281 NM_014719 BC000609 AK291605 AK001640 NM_001206938	164953	-	NM_001130026|FAM115C|285966|family with sequence similarity 115, member C##AK296318|FAM115C|285966|family with sequence similarity 115, member C##BC113530|FAM115C|285966|family with sequence similarity 115, member C##BC117233|FAM115C|285966|family with sequence similarity 115, member C##NM_173678|FAM115C|285966|family with sequence similarity 115, member C##AY167570|FAM115C|285966|family with sequence similarity 115, member C##BC010225|LOC154761|154761|uncharacterized LOC154761##BC041464|LOC154761|154761|uncharacterized LOC154761##NM_001130025|FAM115C|285966|family with sequence similarity 115, member C##AK098041|FAM115C|285966|family with sequence similarity 115, member C##AK297123|LOC154761|154761|uncharacterized LOC154761##AL832734|FAM115C|285966|family with sequence similarity 115, member C##BC033189|LOC154761|154761|uncharacterized LOC154761##BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_178561|CTAGE6P|340307|CTAGE family, member 6, pseudogene##AK299911|FAM115A|9747|family with sequence similarity 115, member A##NM_001206941|FAM115A|9747|family with sequence similarity 115, member A##AB018281|FAM115A|9747|family with sequence similarity 115, member A##NM_014719|FAM115A|9747|family with sequence similarity 115, member A##BC000609|FAM115A|9747|family with sequence similarity 115, member A##AK291605|FAM115A|9747|family with sequence similarity 115, member A##AK001640|FAM115A|9747|family with sequence similarity 115, member A##NM_001206938|FAM115A|9747|family with sequence similarity 115, member A	0.06949	
chr4	53849862	53850000	reg1015655.p1	9.337	+	TSC_hg19_v1_chr4_+_53728483 AK021492 AK027267 AK314942 AY839725 AY839726 BC001087 BC001846 NM_023940 BC025694	-121443	+	AK095318 NM_001242690 NM_024534	-232138	-	AY189288 TSC_hg19_v1_chr4_-_53617616	-232341	-	BC012458 CU689380 GQ129374 GQ129375 TSC_hg19_v1_chr4_-_54232229 BC021137 AB074276 AK096833 BC032453 AY299407 NM_152540	382204	-	TSC_hg19_v1_chr4_+_54243807 AK295737	393838	+	TSC_hg19_v1_chr4_+_54243821 NM_001134937 NM_001134938 NM_030917	393884	+	AK027267|RASL11B|65997|RAS-like, family 11, member B##AK314942|RASL11B|65997|RAS-like, family 11, member B##AY839725|RASL11B|65997|RAS-like, family 11, member B##AY839726|RASL11B|65997|RAS-like, family 11, member B##BC001087|RASL11B|65997|RAS-like, family 11, member B##BC001846|RASL11B|65997|RAS-like, family 11, member B##NM_023940|RASL11B|65997|RAS-like, family 11, member B##BC025694|RASL11B|65997|RAS-like, family 11, member B##NM_001242690|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##NM_024534|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##AY189288|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##BC012458|SCFD2|152579|sec1 family domain containing 2##GQ129374|SCFD2|152579|sec1 family domain containing 2##GQ129375|SCFD2|152579|sec1 family domain containing 2##BC021137|SCFD2|152579|sec1 family domain containing 2##AB074276|SCFD2|152579|sec1 family domain containing 2##AK096833|SCFD2|152579|sec1 family domain containing 2##BC032453|SCFD2|152579|sec1 family domain containing 2##AY299407|SCFD2|152579|sec1 family domain containing 2##NM_152540|SCFD2|152579|sec1 family domain containing 2##AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	0.99967	CTCF.p2:-6:1.000
chr11	115948844	115948973	reg1015131.p1	9.336	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-573728	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-860260	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1399660	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	694790	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	709807	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	709830	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.0	
chr4	70482932	70483052	reg1015018.p1	9.336	+	AY529122 DQ895203 AF064200 AF081793 AJ005162 Y00317 BC026264 TSC_hg19_v1_chr4_-_70361624 AK292748 NM_021139	-121390	-	AF177272 AF177273 AF177274 NM_001207004 NM_053039 AB451456	-336775	+	AF016492 BC069441 BC107059 BC107060 NM_001073 AK222839 AK222872 AK292738 AK298432 BC113649	-402535	-	FJ664272 FJ664273 NM_001105677	22367	-	AK314209 AK304249 NM_001252274 NM_001252275 NM_006798	35973	-	BC010895 NM_014465	143437	-	AY529122|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##DQ895203|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF064200|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF081793|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AJ005162|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##Y00317|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##BC026264|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AK292748|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##NM_021139|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF177272|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF177273|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF177274|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##NM_001207004|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##NM_053039|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AB451456|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF016492|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC069441|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC107059|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC107060|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##NM_001073|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##AK222839|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK222872|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK292738|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK298432|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##BC113649|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##FJ664272|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##FJ664273|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##NM_001105677|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##AK314209|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##AK304249|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252274|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252275|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_006798|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##BC010895|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1##NM_014465|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1	0.04168	
chr14	100462194	100462317	reg1014143.p1	9.335	+	TSC_hg19_v1_chr14_+_100438137 AK289720 BC023997	-24101	+	TSC_hg19_v1_chr14_+_100259749 AK126980 BX247979 NM_001008707 NM_004434 BC033043 U97018 BC032541 CU689414 DQ891556 DQ894743	-202551	+	AK299812 TSC_hg19_v1_chr14_+_100240040	-222264	+	AK295919 TSC_hg19_v1_chr14_+_100485800	23504	+	TSC_hg19_v1_chr14_+_100531758 NM_016337 AK301379	69497	+	TSC_hg19_v1_chr14_+_100531768 AF087843 BC032358 AF052504	69540	+	AK289720|EVL|51466|Enah/Vasp-like##BC023997|EVL|51466|Enah/Vasp-like##AK126980|EML1|2009|echinoderm microtubule associated protein like 1##BX247979|EML1|2009|echinoderm microtubule associated protein like 1##NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1##NM_004434|EML1|2009|echinoderm microtubule associated protein like 1##BC033043|EML1|2009|echinoderm microtubule associated protein like 1##U97018|EML1|2009|echinoderm microtubule associated protein like 1##BC032541|EML1|2009|echinoderm microtubule associated protein like 1##DQ891556|EML1|2009|echinoderm microtubule associated protein like 1##DQ894743|EML1|2009|echinoderm microtubule associated protein like 1##AK299812|EML1|2009|echinoderm microtubule associated protein like 1##AK295919|EVL|51466|Enah/Vasp-like##NM_016337|EVL|51466|Enah/Vasp-like##AK301379|EVL|51466|Enah/Vasp-like##AF087843|EVL|51466|Enah/Vasp-like##BC032358|EVL|51466|Enah/Vasp-like##AF052504|EVL|51466|Enah/Vasp-like	0.034544	
chrX	19390464	19390581	reg1013554.p2	9.335	+	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	-28440	+	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	-249855	-	TSC_hg19_v1_chrX_-_19002476 NM_000292	-388060	-	NM_001001671	142856	-	TSC_hg19_v1_chrX_-_19689029 AK293237 NM_001184960	298534	-	AK293234 AF542051 TSC_hg19_v1_chrX_-_19817892	427353	-	NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##NM_001001671|MAP3K15|389840|mitogen-activated protein kinase kinase kinase 15##AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1	0.995661	CTCF.p2:-8:0.996
chr1	50737787	50737887	reg1012906.p2	9.333	+	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-162299	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-163153	+	TSC_hg19_v1_chr1_+_50574591 NM_001144774 NM_021952	-163246	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	151274	-	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	687740	-	TSC_hg19_v1_chr1_-_51425740 BC067100	687919	-	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_032110|DMRTA2|63950|DMRT-like family A2##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.344851	CTCF.p2:-10:0.345
chr7	66505914	66506036	reg1011564.p1	9.333	+	TSC_hg19_v1_chr7_+_66461858 BC042156 NM_018264 AK001762 BC015591 BC051888	-44117	+	CU688080 TSC_hg19_v1_chr7_-_66460574 BC065700 AF151855 AK001779 AY169963 NM_016038 AK289609	-45475	-	TSC_hg19_v1_chr7_+_66386238 BC010519	-119704	+	TSC_hg19_v1_chr7_-_66767458 BC029419 D38438 D38500 BC029368 BC038841 BC056507	261453	-	TSC_hg19_v1_chr7_+_66767639 AK023257 AK308931	261633	+	TSC_hg19_v1_chr7_+_66767642 AK307290	261673	+	BC042156|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##NM_018264|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##AK001762|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##BC015591|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##BC051888|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##BC065700|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AF151855|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AK001779|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AY169963|SBDS|51119|Shwachman-Bodian-Diamond syndrome##NM_016038|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AK289609|SBDS|51119|Shwachman-Bodian-Diamond syndrome##BC010519|C7orf42|55069|chromosome 7 open reading frame 42##BC029419|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##D38438|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##D38500|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##BC029368|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##BC038841|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##AK023257|STAG3L4|64940|stromal antigen 3-like 4##AK308931|STAG3L4|64940|stromal antigen 3-like 4##AK307290|STAG3L4|64940|stromal antigen 3-like 4	0.977776	CTCF.p2:-36:0.978
chr6	129046903	129047041	reg1014721.p1	9.330	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-205316	-	AK124031 NM_001164687	-807214	-	AK292046 AK097903 BC144034 BC130516 NM_001010923 NM_001164685	-824772	-	NM_000426 NM_001079823 Z26653	157341	+	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	984354	-	NM_001010876	1135443	-	Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##AK292046|THEMIS|387357|thymocyte selection associated##AK097903|THEMIS|387357|thymocyte selection associated##BC144034|THEMIS|387357|thymocyte selection associated##BC130516|THEMIS|387357|thymocyte selection associated##NM_001010923|THEMIS|387357|thymocyte selection associated##NM_001164685|THEMIS|387357|thymocyte selection associated##NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191	0.067382	
chr20	44221336	44221457	reg1011672.p1	9.329	+	AF492015 AF492016 NM_130896 NM_181510	-13432	-	AK126022 CU690968 AF286368 AF286370 AX810710 AX810725 AL118493 BC053369 BC044829 AK301937 AK311906 NM_001198986 NM_020398	-45367	-	BC101600 BC101604 AF411861 NM_080827	-53266	-	AY038182 NM_080753 BC131579	37005	+	AY047610 NM_147198	38510	-	AY047609 NM_147197 BC062670	77496	-	AF492015|WFDC8|90199|WAP four-disulfide core domain 8##AF492016|WFDC8|90199|WAP four-disulfide core domain 8##NM_130896|WFDC8|90199|WAP four-disulfide core domain 8##NM_181510|WFDC8|90199|WAP four-disulfide core domain 8##AK126022|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##AF286368|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##AF286370|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##AL118493|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##BC053369|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##BC044829|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##AK301937|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough##AK311906|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##NM_001198986|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough##NM_020398|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##BC101600|WFDC6|140870|WAP four-disulfide core domain 6##BC101604|WFDC6|140870|WAP four-disulfide core domain 6##AF411861|WFDC6|140870|WAP four-disulfide core domain 6##NM_080827|WFDC6|140870|WAP four-disulfide core domain 6##AY038182|WFDC10A|140832|WAP four-disulfide core domain 10A##NM_080753|WFDC10A|140832|WAP four-disulfide core domain 10A##BC131579|WFDC10A|140832|WAP four-disulfide core domain 10A##AY047610|WFDC9|259240|WAP four-disulfide core domain 9##NM_147198|WFDC9|259240|WAP four-disulfide core domain 9##AY047609|WFDC11|259239|WAP four-disulfide core domain 11##NM_147197|WFDC11|259239|WAP four-disulfide core domain 11##BC062670|WFDC11|259239|WAP four-disulfide core domain 11	0.978749	CTCF.p2:-20:0.954
chr2	15717336	15717445	reg1013124.p2	9.329	+	TSC_hg19_v1_chr2_-_15701451 BC108693 AF388385 BC131735 NM_015909 AB621813	-15932	-	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	-15961	-	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	-944539	+	NM_004939 X70649	14379	+	TSC_hg19_v1_chr2_+_15732004 AB593034 AB593033 AB593031 AK297432 AK298426 BC053673 BC012132 AB593032 AK298212 BC012739 AK313933 EF418570 EF418571 AB527788	14635	+	M55330 TSC_hg19_v1_chr2_+_16080569	363174	+	BC108693|NBAS|51594|neuroblastoma amplified sequence##AF388385|NBAS|51594|neuroblastoma amplified sequence##BC131735|NBAS|51594|neuroblastoma amplified sequence##NM_015909|NBAS|51594|neuroblastoma amplified sequence##AB621813|NBAS|51594|neuroblastoma amplified sequence##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##NM_004939|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##X70649|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593034|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593033|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593031|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK297432|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK298426|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC053673|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC012132|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593032|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK298212|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC012739|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK313933|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##EF418570|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##EF418571|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##M55330|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.760104	CTCF.p2:14:0.760
chr9	116870337	116870450	reg1013751.p2	9.329	+	BC036824 TSC_hg19_v1_chr9_-_116861573	-8851	-	BC010626 NM_138424	-9057	-	TSC_hg19_v1_chr9_-_116840705 AK310776 BC041593 NM_001633	-29679	-	TSC_hg19_v1_chr9_+_116917816 BC035728	47418	+	AY149237 NM_032888	47837	+	TSC_hg19_v1_chr9_+_116930778 AB058773	60439	+	BC036824|KIF12|113220|kinesin family member 12##BC010626|KIF12|113220|kinesin family member 12##NM_138424|KIF12|113220|kinesin family member 12##AK310776|AMBP|259|alpha-1-microglobulin/bikunin precursor##BC041593|AMBP|259|alpha-1-microglobulin/bikunin precursor##NM_001633|AMBP|259|alpha-1-microglobulin/bikunin precursor##BC035728|COL27A1|85301|collagen, type XXVII, alpha 1##AY149237|COL27A1|85301|collagen, type XXVII, alpha 1##NM_032888|COL27A1|85301|collagen, type XXVII, alpha 1##AB058773|COL27A1|85301|collagen, type XXVII, alpha 1	0.565079	CTCF.p2:-1:0.565
chrX	131727049	131727142	reg1011276.p2	9.329	+	BC042090 NM_001170704 TSC_hg19_v1_chrX_-_131624064	-103062	-	AF491305 EU446986 BC074775 BC074776 AB077698 AB077699 AF467070 AJ427918 AJ427919 AY072692 NM_018388 NM_133486	-153418	-	AY372211 AK002178 NM_001170701 NM_001170702 AK300248 NM_001170703	-179510	-	TSC_hg19_v1_chrX_-_132091486 BC037325 AK295118 AL049679 AB067777 AB067776 AK295041	364306	-	AK075402 TSC_hg19_v1_chrX_-_132092281 BC094718	365161	-	AK056706 NM_001077188 NM_147175	368327	-	BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)##EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC037325|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295118|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AL049679|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067777|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067776|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295041|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK056706|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_001077188|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_147175|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2	0.0	
chr12	113612293	113612426	reg1014281.p1	9.328	+	AK308987 NM_001144872	-24755	+	AF086713 AB208935 AK294350 NM_001193520 NM_004658	-38328	-	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	-38947	-	BC005848 BC001132 BC001848 AY148094 TSC_hg19_v1_chr12_-_113623279 AF478457 NM_001111322 NM_024072	10888	-	AK075358 AK123762 AK027741 TSC_hg19_v1_chr12_+_113623525 AY007158 AK027733 NM_032848 AK222908	11114	+	TSC_hg19_v1_chr12_-_113658844 BC013151 NM_138451 AK127152	46503	-	NM_001144872|CCDC42B|387885|coiled-coil domain containing 42B##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC005848|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##BC001132|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##BC001848|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AY148094|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AF478457|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_001111322|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_024072|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AK075358|C12orf52|84934|chromosome 12 open reading frame 52##AK123762|C12orf52|84934|chromosome 12 open reading frame 52##AK027741|C12orf52|84934|chromosome 12 open reading frame 52##AY007158|C12orf52|84934|chromosome 12 open reading frame 52##AK027733|C12orf52|84934|chromosome 12 open reading frame 52##NM_032848|C12orf52|84934|chromosome 12 open reading frame 52##AK222908|C12orf52|84934|chromosome 12 open reading frame 52##BC013151|IQCD|115811|IQ motif containing D##NM_138451|IQCD|115811|IQ motif containing D##AK127152|IQCD|115811|IQ motif containing D	0.991035	CTCF.p2:10:0.991
chr17_ctg5_hap1	746043	746178	reg1011722.p1	9.328	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.212363	CTCF.p2:-22:0.998	CTCF.p2:54:0.214
chr11	95824833	95824964	reg1013476.p1	9.327	+	BC052990 BC012086 TSC_hg19_v1_chr11_-_95657272 BC034474 BX647997 NM_001243571 NM_016156 NM_201278 NM_201281 AB028996	-167542	-	AK293243 TSC_hg19_v1_chr11_-_95657092 AK302940 BC040432 AK291277	-167847	-	D42054 BC039711 BC029385 AB385276 AY225092 CU691748 TSC_hg19_v1_chr11_+_95523869	-301058	+	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	251505	-	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	298144	-	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	298276	+	BC052990|MTMR2|8898|myotubularin related protein 2##BC012086|MTMR2|8898|myotubularin related protein 2##BC034474|MTMR2|8898|myotubularin related protein 2##BX647997|MTMR2|8898|myotubularin related protein 2##NM_001243571|MTMR2|8898|myotubularin related protein 2##NM_016156|MTMR2|8898|myotubularin related protein 2##NM_201278|MTMR2|8898|myotubularin related protein 2##NM_201281|MTMR2|8898|myotubularin related protein 2##AB028996|MTMR2|8898|myotubularin related protein 2##AK293243|MTMR2|8898|myotubularin related protein 2##AK302940|MTMR2|8898|myotubularin related protein 2##BC040432|MTMR2|8898|myotubularin related protein 2##AK291277|MTMR2|8898|myotubularin related protein 2##D42054|CEP57|9702|centrosomal protein 57kDa##BC039711|CEP57|9702|centrosomal protein 57kDa##BC029385|CEP57|9702|centrosomal protein 57kDa##AY225092|CEP57|9702|centrosomal protein 57kDa##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)	0.0	
chr12	62604219	62604362	reg1013777.p1	9.327	+	BC050347 NM_178539	-17707	-	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	-2521151	+	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	-2614373	+	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	49894	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	256289	+	BC042679 AB017814 AB384555 TSC_hg19_v1_chr12_+_62861012	256625	+	BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)##AB017814|MON2|23041|MON2 homolog (S. cerevisiae)	0.0	
chr19	57615484	57615594	reg1012481.p2	9.326	+	AB003039 AF208967 AF208968 AF208969 AB006625 BC150272 AF166122 TSC_hg19_v1_chr19_-_57352095 AK295679 AK307476 NM_001146184 NM_001146185 NM_001146187 NM_006210 NM_001146326 NM_001146327 NM_015363	-263462	-	AF208970 NM_001146186	-279166	-	AK299565 NM_001005850 TSC_hg19_v1_chr19_-_57183124	-432414	-	AK308285 AF124433 NM_020903	15920	+	AF365931 NM_052882	41030	-	NM_001012729	63316	-	AB003039|PEG3|5178|paternally expressed 3##AF208967|PEG3|5178|paternally expressed 3##AF208968|PEG3|5178|paternally expressed 3##AF208969|PEG3|5178|paternally expressed 3##AB006625|PEG3|5178|paternally expressed 3##BC150272|PEG3|5178|paternally expressed 3##AF166122|ZIM2|23619|zinc finger, imprinted 2##AK295679|PEG3|5178|paternally expressed 3##AK307476|PEG3|5178|paternally expressed 3##NM_001146184|PEG3|5178|paternally expressed 3##NM_001146185|PEG3|5178|paternally expressed 3##NM_001146187|PEG3|5178|paternally expressed 3##NM_006210|PEG3|5178|paternally expressed 3##NM_001146326|ZIM2|23619|zinc finger, imprinted 2##NM_001146327|ZIM2|23619|zinc finger, imprinted 2##NM_015363|ZIM2|23619|zinc finger, imprinted 2##AF208970|PEG3|5178|paternally expressed 3##NM_001146186|PEG3|5178|paternally expressed 3##AK299565|ZNF835|90485|zinc finger protein 835##NM_001005850|ZNF835|90485|zinc finger protein 835##AK308285|USP29|57663|ubiquitin specific peptidase 29##AF124433|USP29|57663|ubiquitin specific peptidase 29##NM_020903|USP29|57663|ubiquitin specific peptidase 29##AF365931|ZIM3|114026|zinc finger, imprinted 3##NM_052882|ZIM3|114026|zinc finger, imprinted 3##NM_001012729|DUXA|503835|double homeobox A	0.992228	CTCF.p2:3:0.992
chr1	202158192	202158319	reg1014736.p1	9.325	+	TSC_hg19_v1_chr1_-_202130715 AK127214 AK302869 NM_001199797 NM_002832	-27554	-	TSC_hg19_v1_chr1_-_202129731 AK301051 AK301757 AK311661 AK293186 AK301980	-28511	-	M64322 TSC_hg19_v1_chr1_-_202129719 AK225920 D11327	-28541	-	NM_001017403 AB049405	4919	+	AY358119 BC038795 NM_021636 BC047905	14637	+	AF190501 NM_001017404	25027	+	AK127214|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK302869|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_001199797|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_002832|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301051|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301757|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK311661|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK293186|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301980|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##M64322|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK225920|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##D11327|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_001017403|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AB049405|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AY358119|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC038795|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_021636|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC047905|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AF190501|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_001017404|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6	0.999779	CTCF.p2:-22:1.000
chr16	3078331	3078443	reg1015188.p1	9.325	+	BC064026 BC065514 NM_001002017 NM_001002018 NM_017885	-4132	-	TSC_hg19_v1_chr16_+_3074062 AK075330 BC050674	-4311	+	TSC_hg19_v1_chr16_+_3074053 AK314086	-4332	+	BC128602 NM_001103175	7154	-	AJ272137 NM_022468 AJ239053 AB042328 AF145442 AF185270	18400	+	BC026114 BC045731 TSC_hg19_v1_chr16_-_3109353	30970	-	BC064026|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##BC065514|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##NM_001002017|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##NM_001002018|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##NM_017885|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##AK075330|THOC6|79228|THO complex 6 homolog (Drosophila)##BC050674|THOC6|79228|THO complex 6 homolog (Drosophila)##AK314086|THOC6|79228|THO complex 6 homolog (Drosophila)##BC128602|CCDC64B|146439|coiled-coil domain containing 64B##NM_001103175|CCDC64B|146439|coiled-coil domain containing 64B##AJ272137|MMP25|64386|matrix metallopeptidase 25##NM_022468|MMP25|64386|matrix metallopeptidase 25##AJ239053|MMP25|64386|matrix metallopeptidase 25##AB042328|MMP25|64386|matrix metallopeptidase 25##AF145442|MMP25|64386|matrix metallopeptidase 25##AF185270|MMP25|64386|matrix metallopeptidase 25##BC026114|LOC100507419|100507419|uncharacterized LOC100507419##BC045731|LOC100507419|100507419|uncharacterized LOC100507419	0.997071	CTCF.p2:-4:0.997
chr6	118872383	118872491	reg1012909.p2	9.324	+	NM_002667 M63603 AK311799 BC005269	-2972	+	BC028615 NM_001029858 BC114925	-643747	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-875771	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	100599	-	BC110835 BC064835 NM_001178035	158796	-	NM_014034 AK025738 AL050261 BC010878 AB028628 AF279306 CU679835 CR457347	342971	+	NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like##NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	0.0	
chr6	137113628	137113809	reg1005307.p1	9.324	+	TSC_hg19_v1_chr6_-_137113641 NM_005923 U67156 BC088829	-78	-	BC054503 TSC_hg19_v1_chr6_-_137113611	-108	-	TSC_hg19_v1_chr6_-_137113545 AK310942 D84476	-170	-	TSC_hg19_v1_chr6_-_137113721 AB209093	24	-	TSC_hg19_v1_chr6_+_137143699 NM_000288 BC031606 U88871	29984	+	TSC_hg19_v1_chr6_+_137143749 U76560 BC006268 AB529018 CR542054 CR542076 CU675317 CU689196	30057	+	NM_005923|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##U67156|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##BC088829|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##BC054503|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##AK310942|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##D84476|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##AB209093|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##NM_000288|PEX7|5191|peroxisomal biogenesis factor 7##BC031606|PEX7|5191|peroxisomal biogenesis factor 7##U88871|PEX7|5191|peroxisomal biogenesis factor 7##U76560|PEX7|5191|peroxisomal biogenesis factor 7##BC006268|PEX7|5191|peroxisomal biogenesis factor 7##CR542054|PEX7|5191|peroxisomal biogenesis factor 7##CR542076|PEX7|5191|peroxisomal biogenesis factor 7	0.0119	
chr9	101553543	101553664	reg1015233.p1	9.324	+	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	-82418	-	TSC_hg19_v1_chr9_-_101018013 NM_018421	-535599	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	-535882	-	CR749467 TSC_hg19_v1_chr9_-_101558801 NM_173551	5048	-	TSC_hg19_v1_chr9_+_101569953 AB527376 AB040673 AB078146 AJ132365 NM_024642	16387	+	TSC_hg19_v1_chr9_+_101706027 AK308438 NM_001855 AK095885 L25286 D21230	152380	+	DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_018421|TBC1D2|55357|TBC1 domain family, member 2##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##CR749467|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##NM_173551|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##AB040673|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AB078146|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AJ132365|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##NM_024642|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AK308438|COL15A1|1306|collagen, type XV, alpha 1##NM_001855|COL15A1|1306|collagen, type XV, alpha 1##AK095885|COL15A1|1306|collagen, type XV, alpha 1##L25286|COL15A1|1306|collagen, type XV, alpha 1##D21230|COL15A1|1306|collagen, type XV, alpha 1	0.999756	CTCF.p2:22:1.000
chr12	113863249	113863381	reg1013734.p1	9.323	+	TSC_hg19_v1_chr12_+_113860217 BC009849 NM_138432 BC091479 AF134473	-3118	+	J05037 TSC_hg19_v1_chr12_-_113841693 AK292760 BC020750 NM_006843	-21641	-	TSC_hg19_v1_chr12_+_113796394 BC030618	-66929	+	AF291181 NM_022363	46561	-	CU678656 EU831458 EU831545 AB385372 AB014582 BC004289 BC006137 AL117547 TSC_hg19_v1_chr12_-_114404131 AK291444 AK314606 NM_001146698 NM_001146699 NM_016196	540789	-	NM_080718 U80987 U89353 AB527531 EU446658	978389	-	BC009849|SDSL|113675|serine dehydratase-like##NM_138432|SDSL|113675|serine dehydratase-like##BC091479|SDSL|113675|serine dehydratase-like##AF134473|SDSL|113675|serine dehydratase-like##J05037|SDS|10993|serine dehydratase##AK292760|SDS|10993|serine dehydratase##BC020750|SDS|10993|serine dehydratase##NM_006843|SDS|10993|serine dehydratase##BC030618|PLBD2|196463|phospholipase B domain containing 2##AF291181|LHX5|64211|LIM homeobox 5##NM_022363|LHX5|64211|LIM homeobox 5##EU831458|RBM19|9904|RNA binding motif protein 19##EU831545|RBM19|9904|RNA binding motif protein 19##AB014582|RBM19|9904|RNA binding motif protein 19##BC004289|RBM19|9904|RNA binding motif protein 19##BC006137|RBM19|9904|RNA binding motif protein 19##AL117547|RBM19|9904|RNA binding motif protein 19##AK291444|RBM19|9904|RNA binding motif protein 19##AK314606|RBM19|9904|RNA binding motif protein 19##NM_001146698|RBM19|9904|RNA binding motif protein 19##NM_001146699|RBM19|9904|RNA binding motif protein 19##NM_016196|RBM19|9904|RNA binding motif protein 19##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5	0.327386	CTCF.p2:13:0.327
chr13	45012233	45012394	reg1012244.p2	9.323	+	NM_001243797	-924	-	NM_006022 TSC_hg19_v1_chr13_-_45011118	-1224	-	AK290751 TSC_hg19_v1_chr13_-_45010994	-1319	-	NM_001243798	36123	-	AK091854 AX747223 TSC_hg19_v1_chr13_-_45150467 BC136475 BC136482	138117	-	TSC_hg19_v1_chr13_-_45150604 AB082525 NM_001243799 NM_183422	138337	-	NM_001243797|TSC22D1|8848|TSC22 domain family, member 1##NM_006022|TSC22D1|8848|TSC22 domain family, member 1##AK290751|TSC22D1|8848|TSC22 domain family, member 1##NM_001243798|TSC22D1|8848|TSC22 domain family, member 1##AK091854|TSC22D1|8848|TSC22 domain family, member 1##BC136475|TSC22D1|8848|TSC22 domain family, member 1##BC136482|TSC22D1|8848|TSC22 domain family, member 1##AB082525|TSC22D1|8848|TSC22 domain family, member 1##NM_001243799|TSC22D1|8848|TSC22 domain family, member 1##NM_183422|TSC22D1|8848|TSC22 domain family, member 1	0.892574	CTCF.p2:2:0.893
chr19	55431166	55431266	reg1013158.p1	9.323	+	AJ001383 NM_001145457 NM_001145458 NM_001242356 NM_001242357 NM_004829 BC030265 BC064806 AJ006121 AJ006122 AJ006123 AY346373 CU687946	-13690	+	NM_002000 NM_133269 NM_133271 NM_133272 NM_133273 NM_133274 NM_133277 NM_133278 NM_133279 AK290922 BC027953 U56236 U56237 U43677 U43774 DQ890935 DQ894098 AB590300 CU693344 D87853 D87854 D87855 D87856 D87857 D87858 D87859 D87860 D87861 D87862 DQ075334 DQ075335 DQ075336 DQ075337 DQ075338 DQ075339 S82919 X92558 X92559 X92560 X92561 X92562	-45570	+	AF262967 AF263617 NM_001242867 NM_006737 X93595 BC105678 BC107951 L41270 AY366256 L76665 L76666 U30272 AJ276125 X94373 AY789067 AY789068 AY789070 EF582384 X93596 X94374	-69303	+	BC109124 BC109125 AY154462 NM_001127255 NM_139176 NM_206828 AK298630	27660	-	NM_001174081	45435	+	NM_001174082 NM_001174083 NM_017852 AK302989 BC039269 TSC_hg19_v1_chr19_+_55477768 AF310106 AK000517 AK292681 AB209300 BC003592 AF298547 AK025952 AK223253 AK223269 AF464764	46544	+	AJ001383|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_001145457|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_001145458|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_001242356|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_001242357|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_004829|NCR1|9437|natural cytotoxicity triggering receptor 1##BC064806|NCR1|9437|natural cytotoxicity triggering receptor 1##AJ006121|NCR1|9437|natural cytotoxicity triggering receptor 1##AJ006122|NCR1|9437|natural cytotoxicity triggering receptor 1##AJ006123|NCR1|9437|natural cytotoxicity triggering receptor 1##AY346373|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_002000|FCAR|2204|Fc fragment of IgA, receptor for##NM_133269|FCAR|2204|Fc fragment of IgA, receptor for##NM_133271|FCAR|2204|Fc fragment of IgA, receptor for##NM_133272|FCAR|2204|Fc fragment of IgA, receptor for##NM_133273|FCAR|2204|Fc fragment of IgA, receptor for##NM_133274|FCAR|2204|Fc fragment of IgA, receptor for##NM_133277|FCAR|2204|Fc fragment of IgA, receptor for##NM_133278|FCAR|2204|Fc fragment of IgA, receptor for##NM_133279|FCAR|2204|Fc fragment of IgA, receptor for##AK290922|FCAR|2204|Fc fragment of IgA, receptor for##BC027953|FCAR|2204|Fc fragment of IgA, receptor for##U56236|FCAR|2204|Fc fragment of IgA, receptor for##U56237|FCAR|2204|Fc fragment of IgA, receptor for##U43677|FCAR|2204|Fc fragment of IgA, receptor for##U43774|FCAR|2204|Fc fragment of IgA, receptor for##DQ890935|FCAR|2204|Fc fragment of IgA, receptor for##DQ894098|FCAR|2204|Fc fragment of IgA, receptor for##D87853|FCAR|2204|Fc fragment of IgA, receptor for##D87854|FCAR|2204|Fc fragment of IgA, receptor for##D87855|FCAR|2204|Fc fragment of IgA, receptor for##D87856|FCAR|2204|Fc fragment of IgA, receptor for##D87857|FCAR|2204|Fc fragment of IgA, receptor for##D87858|FCAR|2204|Fc fragment of IgA, receptor for##D87859|FCAR|2204|Fc fragment of IgA, receptor for##D87860|FCAR|2204|Fc fragment of IgA, receptor for##D87861|FCAR|2204|Fc fragment of IgA, receptor for##D87862|FCAR|2204|Fc fragment of IgA, receptor for##DQ075334|FCAR|2204|Fc fragment of IgA, receptor for##DQ075335|FCAR|2204|Fc fragment of IgA, receptor for##DQ075336|FCAR|2204|Fc fragment of IgA, receptor for##DQ075337|FCAR|2204|Fc fragment of IgA, receptor for##DQ075338|FCAR|2204|Fc fragment of IgA, receptor for##DQ075339|FCAR|2204|Fc fragment of IgA, receptor for##S82919|FCAR|2204|Fc fragment of IgA, receptor for##X92558|FCAR|2204|Fc fragment of IgA, receptor for##X92559|FCAR|2204|Fc fragment of IgA, receptor for##X92560|FCAR|2204|Fc fragment of IgA, receptor for##X92561|FCAR|2204|Fc fragment of IgA, receptor for##X92562|FCAR|2204|Fc fragment of IgA, receptor for##AF262967|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AF263617|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##NM_001242867|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##NM_006737|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##X93595|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##BC105678|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##BC107951|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##L41270|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AY366256|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##L76665|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##L76666|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##U30272|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AJ276125|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##X94373|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AY789067|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AY789068|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AY789070|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##EF582384|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##X93596|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##X94374|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##BC109124|NLRP7|199713|NLR family, pyrin domain containing 7##BC109125|NLRP7|199713|NLR family, pyrin domain containing 7##AY154462|NLRP7|199713|NLR family, pyrin domain containing 7##NM_001127255|NLRP7|199713|NLR family, pyrin domain containing 7##NM_139176|NLRP7|199713|NLR family, pyrin domain containing 7##NM_206828|NLRP7|199713|NLR family, pyrin domain containing 7##AK298630|NLRP7|199713|NLR family, pyrin domain containing 7##NM_001174081|NLRP2|55655|NLR family, pyrin domain containing 2##NM_001174082|NLRP2|55655|NLR family, pyrin domain containing 2##NM_001174083|NLRP2|55655|NLR family, pyrin domain containing 2##NM_017852|NLRP2|55655|NLR family, pyrin domain containing 2##AK302989|NLRP2|55655|NLR family, pyrin domain containing 2##BC039269|NLRP2|55655|NLR family, pyrin domain containing 2##AF310106|NLRP2|55655|NLR family, pyrin domain containing 2##AK000517|NLRP2|55655|NLR family, pyrin domain containing 2##AK292681|NLRP2|55655|NLR family, pyrin domain containing 2##AB209300|NLRP2|55655|NLR family, pyrin domain containing 2##BC003592|NLRP2|55655|NLR family, pyrin domain containing 2##AF298547|NLRP2|55655|NLR family, pyrin domain containing 2##AK025952|NLRP2|55655|NLR family, pyrin domain containing 2##AK223253|NLRP2|55655|NLR family, pyrin domain containing 2##AK223269|NLRP2|55655|NLR family, pyrin domain containing 2##AF464764|NLRP2|55655|NLR family, pyrin domain containing 2	0.830069	CTCF.p2:12:0.830
chr2	180305500	180305613	reg1011385.p1	9.323	+	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	-176151	-	AL832777 NM_173648	-390771	-	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-633453	-	AK057999 NM_001113398	121758	-	AK096822 NM_001113397	305212	-	TSC_hg19_v1_chr2_-_180726048 AK131432 BC033042	420491	-	AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B##AK096822|ZNF385B|151126|zinc finger protein 385B##NM_001113397|ZNF385B|151126|zinc finger protein 385B##AK131432|ZNF385B|151126|zinc finger protein 385B##BC033042|ZNF385B|151126|zinc finger protein 385B	0.998745	CTCF.p2:18:0.999
chr1	19201853	19201957	reg1012637.p1	9.322	+	NM_152232 AB527225	-15750	-	NM_001135254 NM_002584 NM_013945 X96743	-244406	+	NM_152375	-394482	+	AK294552 NM_001161504	15479	-	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	27249	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	80894	-	NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##NM_152375|KLHDC7A|127707|kelch domain containing 7A##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001136265|IFFO2|126917|intermediate filament family orphan 2	0.350122	CTCF.p2:-5:0.305
chr4	75177531	75177654	reg1012397.p1	9.322	+	AK289455 BC127938 BC127939 DQ235269 AY358920 NM_001013442 DQ235264 DQ235265 DQ235266 DQ235267 DQ235268	-3373	+	TSC_hg19_v1_chr4_+_75023834 AX794782 BC037529 NM_001144978 BC041943 AX794779	-153727	+	NM_002089 TSC_hg19_v1_chr4_-_74965027	-212570	-	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	53348	+	BC009799 M30704 NM_001657	133260	+	BC009799 M30704 NM_001657	303036	+	AK289455|EPGN|255324|epithelial mitogen homolog (mouse)##BC127938|EPGN|255324|epithelial mitogen homolog (mouse)##BC127939|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235269|EPGN|255324|epithelial mitogen homolog (mouse)##AY358920|EPGN|255324|epithelial mitogen homolog (mouse)##NM_001013442|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235264|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235265|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235266|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235267|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235268|EPGN|255324|epithelial mitogen homolog (mouse)##BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_002089|CXCL2|2920|chemokine (C-X-C motif) ligand 2##AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin	0.946921	CTCF.p2:25:0.947
chr6	45387323	45387461	reg1015043.p1	9.321	+	AF073930 NM_003599 TSC_hg19_v1_chr6_-_45345614 AK303838 BC035816 BC050384 NM_181356 AK313874	-41717	-	NM_001015051 NM_001024630 AF053952	-91336	+	TSC_hg19_v1_chr6_+_44355461 AK128737 AK299738 BC001568 AB007892 AB590067 CU674768 DQ891623 DQ894814 U86753	-1031892	+	TSC_hg19_v1_chr6_+_45389825 NM_004348	2473	+	TSC_hg19_v1_chr6_+_45390325 BC108919 BC108920	2913	+	TSC_hg19_v1_chr6_+_45390379 L40992	3020	+	AF073930|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_003599|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK303838|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC035816|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC050384|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_181356|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK313874|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_001015051|RUNX2|860|runt-related transcription factor 2##NM_001024630|RUNX2|860|runt-related transcription factor 2##AF053952|RUNX2|860|runt-related transcription factor 2##AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_004348|RUNX2|860|runt-related transcription factor 2##BC108919|RUNX2|860|runt-related transcription factor 2##BC108920|RUNX2|860|runt-related transcription factor 2##L40992|RUNX2|860|runt-related transcription factor 2	0.0	
chr1	44683504	44683648	reg1015120.p1	9.320	+	TSC_hg19_v1_chr1_+_44679145 NM_001034023 NM_001034024 NM_019100 AL136657 AK300372 BC002855 AK300442 AK293598 AK021605 AK289366 AK298793 AB037846 AL137200 BC008053 AK300217	-4433	+	BC049844 NM_173484 AK097479 BC035408 CU690622	-99027	+	TSC_hg19_v1_chr1_-_44497141 AK315933 NM_001024845	-186437	-	AB528814 TSC_hg19_v1_chr1_-_44820904 AF007157	137232	-	AK308597 TSC_hg19_v1_chr1_-_44820929 BC144384	137350	-	TSC_hg19_v1_chr1_-_44820938 AK290567 NM_024066	137360	-	NM_001034023|DMAP1|55929|DNA methyltransferase 1 associated protein 1##NM_001034024|DMAP1|55929|DNA methyltransferase 1 associated protein 1##NM_019100|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AL136657|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300372|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC002855|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300442|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK293598|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK021605|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK289366|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK298793|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AB037846|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AL137200|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC008053|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300217|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC049844|KLF17|128209|Kruppel-like factor 17##NM_173484|KLF17|128209|Kruppel-like factor 17##AK097479|KLF17|128209|Kruppel-like factor 17##BC035408|KLF17|128209|Kruppel-like factor 17##AK315933|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_001024845|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AF007157|ERI3|79033|ERI1 exoribonuclease family member 3##BC144384|ERI3|79033|ERI1 exoribonuclease family member 3##AK290567|ERI3|79033|ERI1 exoribonuclease family member 3##NM_024066|ERI3|79033|ERI1 exoribonuclease family member 3	0.975796	CTCF.p2:0:0.976
chr14	53647624	53647769	reg1013181.p2	9.320	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-27646	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-27728	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-27823	-	NM_130851	773573	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	775837	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	1216025	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.104414	
chr5	72747227	72747331	reg1013285.p1	9.320	+	NM_004472 U59832 TSC_hg19_v1_chr5_-_72744463	-2870	-	U13222 TSC_hg19_v1_chr5_-_72743884	-3420	-	AK315460 NM_153217 AK055830	-278248	+	TSC_hg19_v1_chr5_+_72794266 NM_001037637 NM_001207 AK310919 AK225964 AK291125	46980	+	TSC_hg19_v1_chr5_+_72794276 BC061913 AB062126 BC008062 X74070 X53280 AB463433	47103	+	TSC_hg19_v1_chr5_-_72861256 AK022876	113953	-	NM_004472|FOXD1|2297|forkhead box D1##U59832|FOXD1|2297|forkhead box D1##U13222|FOXD1|2297|forkhead box D1##AK315460|TMEM174|134288|transmembrane protein 174##NM_153217|TMEM174|134288|transmembrane protein 174##AK055830|TMEM174|134288|transmembrane protein 174##NM_001037637|BTF3|689|basic transcription factor 3##NM_001207|BTF3|689|basic transcription factor 3##AK310919|BTF3|689|basic transcription factor 3##AK225964|BTF3|689|basic transcription factor 3##AK291125|BTF3|689|basic transcription factor 3##BC061913|BTF3|689|basic transcription factor 3##AB062126|BTF3|689|basic transcription factor 3##BC008062|BTF3|689|basic transcription factor 3##X74070|BTF3|689|basic transcription factor 3##X53280|BTF3|689|basic transcription factor 3##AK022876|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2	0.806523	CTCF.p2:13:0.807
chr2	112459836	112459968	reg1014644.p1	9.318	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-581415	+	AK300513 NM_001142807 BC022268	-969723	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-1024080	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	181724	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	181859	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	196283	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.0	
chr11	18127650	18127759	reg1013689.p2	9.317	+	TSC_hg19_v1_chr11_-_18127617 AB489136 BC012010 AK123457 NM_138421	-84	-	AY196345 BC106739 BC106740 X52836 AB590778 NM_004179	-65385	-	BC065375 AK292286 TSC_hg19_v1_chr11_-_18034745	-92988	-	BC067292 NM_054031	14797	+	BC095509 NM_054032	66679	+	BC007026 AK312182 M81349 TSC_hg19_v1_chr11_-_18258350	130640	-	AB489136|SAAL1|113174|serum amyloid A-like 1##BC012010|SAAL1|113174|serum amyloid A-like 1##AK123457|SAAL1|113174|serum amyloid A-like 1##NM_138421|SAAL1|113174|serum amyloid A-like 1##AY196345|TPH1|7166|tryptophan hydroxylase 1##BC106739|TPH1|7166|tryptophan hydroxylase 1##BC106740|TPH1|7166|tryptophan hydroxylase 1##X52836|TPH1|7166|tryptophan hydroxylase 1##NM_004179|TPH1|7166|tryptophan hydroxylase 1##BC065375|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AK292286|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC067292|MRGPRX3|117195|MAS-related GPR, member X3##NM_054031|MRGPRX3|117195|MAS-related GPR, member X3##BC095509|MRGPRX4|117196|MAS-related GPR, member X4##NM_054032|MRGPRX4|117196|MAS-related GPR, member X4##BC007026|SAA4|6291|serum amyloid A4, constitutive##AK312182|SAA4|6291|serum amyloid A4, constitutive##M81349|SAA4|6291|serum amyloid A4, constitutive	0.988582	CTCF.p2:-1:0.989
chr15	54255281	54255409	reg1015095.p1	9.317	+	AK096055 BX537884 NM_182758	-203498	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-1173151	-	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	-1284464	-	NM_001080534	49755	+	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	1233747	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	1233834	-	AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1	0.898749	CTCF.p2:-14:0.899
chr15	93631186	93631318	reg1013845.p1	9.317	+	AK299363 NM_001166283	-14099	-	AK309814 AK125204 NM_001166288 NM_001166289	-14338	-	TSC_hg19_v1_chr15_-_93616364 AK074966 BC015886 NM_001166286	-14879	-	NM_001166287	499	-	AB463222 AM392685 BC146682 AK074980 BC140838 BC151132 AL136826 TSC_hg19_v1_chr15_-_93632430 AK074910 AK291365 NM_020211	1101	-	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	1143606	+	AK299363|RGMA|56963|RGM domain family, member A##NM_001166283|RGMA|56963|RGM domain family, member A##AK309814|RGMA|56963|RGM domain family, member A##AK125204|RGMA|56963|RGM domain family, member A##NM_001166288|RGMA|56963|RGM domain family, member A##NM_001166289|RGMA|56963|RGM domain family, member A##AK074966|RGMA|56963|RGM domain family, member A##BC015886|RGMA|56963|RGM domain family, member A##NM_001166286|RGMA|56963|RGM domain family, member A##NM_001166287|RGMA|56963|RGM domain family, member A##AM392685|RGMA|56963|RGM domain family, member A##BC146682|RGMA|56963|RGM domain family, member A##AK074980|RGMA|56963|RGM domain family, member A##BC140838|RGMA|56963|RGM domain family, member A##BC151132|RGMA|56963|RGM domain family, member A##AL136826|RGMA|56963|RGM domain family, member A##AK074910|RGMA|56963|RGM domain family, member A##NM_020211|RGMA|56963|RGM domain family, member A##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2	0.986939	CTCF.p2:1:0.987
chr19	49649235	49649330	reg1012750.p2	9.317	+	TSC_hg19_v1_chr19_+_49622818 AB014554 NM_003660 BC101518 BC101520 BC143470 AK289757	-26563	+	CU690794 BC051004 AK001352 BC069669 BC069693 BC069712 BC069750 NM_018111	-26945	-	TSC_hg19_v1_chr19_+_49617635 BC027618 AF311862 AB528696	-31637	+	BC112355 TSC_hg19_v1_chr19_-_49658663 BC069795 BC069802 M60052 AK300706 BC094691 NM_002152	9380	-	AK307897 NM_001195227 NM_017636 TSC_hg19_v1_chr19_+_49661029	11731	+	TSC_hg19_v1_chr19_+_49661048 AK074664 AF497623 AK292862 AY297044 AY297045 AY297046 AY046396 AJ575813 BC132727 BC144122 BC144123 AK295820	11784	+	AB014554|PPFIA3|8541|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3##NM_003660|PPFIA3|8541|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3##BC101518|PPFIA3|8541|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3##BC101520|PPFIA3|8541|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3##BC143470|PPFIA3|8541|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3##AK289757|PPFIA3|8541|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3##BC051004|C19orf73|55150|chromosome 19 open reading frame 73##AK001352|C19orf73|55150|chromosome 19 open reading frame 73##BC069669|C19orf73|55150|chromosome 19 open reading frame 73##BC069693|C19orf73|55150|chromosome 19 open reading frame 73##BC069712|C19orf73|55150|chromosome 19 open reading frame 73##BC069750|C19orf73|55150|chromosome 19 open reading frame 73##NM_018111|C19orf73|55150|chromosome 19 open reading frame 73##BC027618|LIN7B|64130|lin-7 homolog B (C. elegans)##AF311862|LIN7B|64130|lin-7 homolog B (C. elegans)##BC112355|HRC|3270|histidine rich calcium binding protein##BC069795|HRC|3270|histidine rich calcium binding protein##BC069802|HRC|3270|histidine rich calcium binding protein##M60052|HRC|3270|histidine rich calcium binding protein##AK300706|HRC|3270|histidine rich calcium binding protein##BC094691|HRC|3270|histidine rich calcium binding protein##NM_002152|HRC|3270|histidine rich calcium binding protein##AK307897|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_001195227|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_017636|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AF497623|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK292862|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297044|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297045|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297046|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY046396|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AJ575813|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC132727|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144122|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144123|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK295820|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4	0.997991	CTCF.p2:-7:0.998
chr9	66707191	66707328	reg1013496.p1	9.317	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-153984	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-213063	-	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	-248763	-	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	1219557	+	TSC_hg19_v1_chr9_+_68726468 AK311167	2019243	+	TSC_hg19_v1_chr9_+_69065493 AK311167	2358279	+	BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene	0.981907	CTCF.p2:5:0.982
chr1	40544308	40544452	reg1013075.p1	9.316	+	TSC_hg19_v1_chr1_+_40506457 L12168	-37922	+	TSC_hg19_v1_chr1_+_40506444 BC013963	-37939	+	AK295396 AK298110 TSC_hg19_v1_chr1_+_40506430 M98474 AK298094	-37952	+	CR542053 CU678959 AK301682 TSC_hg19_v1_chr1_-_40562915 AK075496 AK312287 U44772	18532	-	TSC_hg19_v1_chr1_-_40562918 BC008426	18539	-	AK302232 AK310799 TSC_hg19_v1_chr1_-_40562925	18547	-	L12168|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##BC013963|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK295396|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK298110|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##M98474|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##AK298094|CAP1|10487|CAP, adenylate cyclase-associated protein 1 (yeast)##CR542053|PPT1|5538|palmitoyl-protein thioesterase 1##AK301682|PPT1|5538|palmitoyl-protein thioesterase 1##AK075496|PPT1|5538|palmitoyl-protein thioesterase 1##AK312287|PPT1|5538|palmitoyl-protein thioesterase 1##U44772|PPT1|5538|palmitoyl-protein thioesterase 1##BC008426|PPT1|5538|palmitoyl-protein thioesterase 1##AK302232|PPT1|5538|palmitoyl-protein thioesterase 1##AK310799|PPT1|5538|palmitoyl-protein thioesterase 1	0.332701	CTCF.p2:1:0.333
chr21	35347996	35348176	reg1010494.p2	9.316	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-59994	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-157416	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-333231	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	97755	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	97843	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	388260	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.0	
chr3	43203712	43203851	reg1012798.p2	9.316	+	TSC_hg19_v1_chr3_-_43147568 BC060861 NM_032806	-56230	-	NM_001129908 AK311059 AK311069 AK091001 AX746726	-182988	+	NM_001205272 BC062786 AK130974 TSC_hg19_v1_chr3_+_42977866 AK296046	-225923	+	TSC_hg19_v1_chr3_+_43328077 AK291360 NM_001100594 NM_017719 BC071567 AK295187 CR749621 AK314376	124288	+	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	459657	-	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	459732	-	BC060861|C3orf39|84892|chromosome 3 open reading frame 39##NM_032806|C3orf39|84892|chromosome 3 open reading frame 39##NM_001129908|FAM198A|729085|family with sequence similarity 198, member A##AK311059|FAM198A|729085|family with sequence similarity 198, member A##AK311069|FAM198A|729085|family with sequence similarity 198, member A##AK091001|FAM198A|729085|family with sequence similarity 198, member A##NM_001205272|KRBOX1|100506243|KRAB box domain containing 1##BC062786|KRBOX1|100506243|KRAB box domain containing 1##AK130974|KRBOX1|100506243|KRAB box domain containing 1##AK291360|SNRK|54861|SNF related kinase##NM_001100594|SNRK|54861|SNF related kinase##NM_017719|SNRK|54861|SNF related kinase##BC071567|SNRK|54861|SNF related kinase##AK295187|SNRK|54861|SNF related kinase##CR749621|SNRK|54861|SNF related kinase##AK314376|SNRK|54861|SNF related kinase##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10	0.013899	
chr5	115893490	115893629	reg1012400.p1	9.316	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-472838	+	NM_001195581	-506397	+	AK291655 BC068560 NM_173800 BC060869 AY560010 BC109022 BC109023	-595348	+	TSC_hg19_v1_chr5_+_115898220 D28352	4665	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	16955	-	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2430679	-	AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##NM_001195581|LOC644100|644100|uncharacterized LOC644100##AK291655|AQPEP|206338|laeverin##BC068560|AQPEP|206338|laeverin##NM_173800|AQPEP|206338|laeverin##BC060869|AQPEP|206338|laeverin##AY560010|AQPEP|206338|laeverin##BC109022|AQPEP|206338|laeverin##BC109023|AQPEP|206338|laeverin##AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2	0.956039	CTCF.p2:6:0.956
chr6	86033262	86033397	reg1014825.p1	9.315	+	HQ258462 NM_001080508 BC157841 BC132715	-559404	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	-560159	-	TSC_hg19_v1_chr6_-_85472330 AJ010278	-561004	-	NM_001204813 NM_002526 TSC_hg19_v1_chr6_+_86159433	126043	+	TSC_hg19_v1_chr6_+_86159827 AK314661 AX772810 X55740 BC015940 AK075008 BC065937 DQ186653	126486	+	BC046520 AY044865 CU686683 TSC_hg19_v1_chr6_-_86303440 BC095419	270064	-	HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18##AJ010278|TBX18|9096|T-box 18##NM_001204813|NT5E|4907|5'-nucleotidase, ecto (CD73)##NM_002526|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK314661|NT5E|4907|5'-nucleotidase, ecto (CD73)##X55740|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC015940|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK075008|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC065937|NT5E|4907|5'-nucleotidase, ecto (CD73)##DQ186653|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC046520|SNX14|57231|sorting nexin 14##AY044865|SNX14|57231|sorting nexin 14##BC095419|SNX14|57231|sorting nexin 14	0.997384	CTCF.p2:8:0.997
chr8	63896697	63896830	reg1013008.p1	9.315	+	TSC_hg19_v1_chr8_+_63161499 AK096949 NM_173688 AX721226 AB463913	-735199	+	TSC_hg19_v1_chr8_+_63161185 AK299689	-735557	+	TSC_hg19_v1_chr8_-_62627167 NM_001164754 NM_001164755 NM_001164756 NM_004318 NM_032466	-1269574	-	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	54635	-	NM_003878	54846	-	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	101864	-	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_001164754|ASPH|444|aspartate beta-hydroxylase##NM_001164755|ASPH|444|aspartate beta-hydroxylase##NM_001164756|ASPH|444|aspartate beta-hydroxylase##NM_004318|ASPH|444|aspartate beta-hydroxylase##NM_032466|ASPH|444|aspartate beta-hydroxylase##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##NM_003878|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein	0.396592	CTCF.p2:38:0.397
chr10	64926702	64926841	reg1014862.p1	9.314	+	TSC_hg19_v1_chr10_+_64893098 AF267866 AK301656 AK225257 AK225256 AY267839 AY267840 BC011707 AB590768 EU832288 EU832373	-33625	+	TSC_hg19_v1_chr10_+_64893044 NM_030759 AK054957 AL136656	-33740	+	AK312813 NM_001136178	-347845	-	BC126403 BC143722 TSC_hg19_v1_chr10_-_65029004 BX537954 NM_004241 BC108649	102144	-	TSC_hg19_v1_chr10_+_65224979 BC007866 AK314171	298213	+	AK027280 EF068222 NM_032776 TSC_hg19_v1_chr10_-_65225738	298907	-	AF267866|NRBF2|29982|nuclear receptor binding factor 2##AK301656|NRBF2|29982|nuclear receptor binding factor 2##AK225257|NRBF2|29982|nuclear receptor binding factor 2##AK225256|NRBF2|29982|nuclear receptor binding factor 2##AY267839|NRBF2|29982|nuclear receptor binding factor 2##AY267840|NRBF2|29982|nuclear receptor binding factor 2##BC011707|NRBF2|29982|nuclear receptor binding factor 2##EU832288|NRBF2|29982|nuclear receptor binding factor 2##EU832373|NRBF2|29982|nuclear receptor binding factor 2##NM_030759|NRBF2|29982|nuclear receptor binding factor 2##AK054957|NRBF2|29982|nuclear receptor binding factor 2##AL136656|NRBF2|29982|nuclear receptor binding factor 2##AK312813|EGR2|1959|early growth response 2##NM_001136178|EGR2|1959|early growth response 2##BC126403|JMJD1C|221037|jumonji domain containing 1C##BC143722|JMJD1C|221037|jumonji domain containing 1C##BX537954|JMJD1C|221037|jumonji domain containing 1C##NM_004241|JMJD1C|221037|jumonji domain containing 1C##BC108649|JMJD1C|221037|jumonji domain containing 1C##BC007866|LOC84989|84989|uncharacterized LOC84989##AK314171|LOC84989|84989|uncharacterized LOC84989##AK027280|JMJD1C|221037|jumonji domain containing 1C##EF068222|JMJD1C|221037|jumonji domain containing 1C##NM_032776|JMJD1C|221037|jumonji domain containing 1C	0.668967	CTCF.p2:-26:0.669
chr20	31887045	31887170	reg1012379.p1	9.314	+	NM_033197 AK290243 AF364078 AK310964 TSC_hg19_v1_chr20_+_31871019 AK313176 BC008429 AY358595	-16123	+	AF417256 AF417257 BC012549 NM_001243193 NM_016583 NM_130852 AK292778 AY359020 AB024937 AF158745 AF439448 AF172993	-63295	+	BC041904 NM_001042439 NM_178466 BC066354	-81970	+	BC001215 TSC_hg19_v1_chr20_-_31989326 AF152097 BC050706 AK027449 AF161516 AK023992 AK222745 AK292075 AK295342 AK309906 AK314532 AY462283 AY462284	102207	-	TSC_hg19_v1_chr20_-_31989330 NM_016082 NM_016408	102232	-	AB590297 DQ893566 DQ896816 AK301800 TSC_hg19_v1_chr20_-_32031570 U40571 BC026215 S81737 AK291994 NM_003098	144454	-	NM_033197|BPIFB1|92747|BPI fold containing family B, member 1##AK290243|BPIFB1|92747|BPI fold containing family B, member 1##AF364078|BPIFB1|92747|BPI fold containing family B, member 1##AK310964|BPIFB1|92747|BPI fold containing family B, member 1##AK313176|BPIFB1|92747|BPI fold containing family B, member 1##BC008429|BPIFB1|92747|BPI fold containing family B, member 1##AY358595|BPIFB1|92747|BPI fold containing family B, member 1##AF417256|BPIFA1|51297|BPI fold containing family A, member 1##AF417257|BPIFA1|51297|BPI fold containing family A, member 1##BC012549|BPIFA1|51297|BPI fold containing family A, member 1##NM_001243193|BPIFA1|51297|BPI fold containing family A, member 1##NM_016583|BPIFA1|51297|BPI fold containing family A, member 1##NM_130852|BPIFA1|51297|BPI fold containing family A, member 1##AK292778|BPIFA1|51297|BPI fold containing family A, member 1##AY359020|BPIFA1|51297|BPI fold containing family A, member 1##AB024937|BPIFA1|51297|BPI fold containing family A, member 1##AF158745|BPIFA1|51297|BPI fold containing family A, member 1##AF439448|BPIFA1|51297|BPI fold containing family A, member 1##AF172993|BPIFA1|51297|BPI fold containing family A, member 1##BC041904|BPIFA3|128861|BPI fold containing family A, member 3##NM_001042439|BPIFA3|128861|BPI fold containing family A, member 3##NM_178466|BPIFA3|128861|BPI fold containing family A, member 3##BC066354|BPIFA3|128861|BPI fold containing family A, member 3##BC001215|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AF152097|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##BC050706|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK027449|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AF161516|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK023992|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK222745|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK292075|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK295342|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK309906|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK314532|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AY462283|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AY462284|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##NM_016082|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##NM_016408|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##DQ893566|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##DQ896816|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##AK301800|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##U40571|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##BC026215|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##S81737|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##AK291994|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##NM_003098|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)	0.998945	CTCF.p2:4:0.999
chr21	43032899	43033037	reg1006421.p2	9.314	+	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	-152885	-	TSC_hg19_v1_chr21_-_42880078 AF329454 EU090249 HM245389 HM245390	-152891	-	AK291813 TSC_hg19_v1_chr21_-_42880030 AK296860 NM_001135099 BC051839 AF270487 BC035623	-152981	-	TSC_hg19_v1_chr21_-_43187213 EU832165 EU832259 BC035755 BC110617 BC110618 AB047783 AJ278016 NM_020639	154254	-	AK027424 TSC_hg19_v1_chr21_-_43187270	154299	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	266530	-	BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2##AF329454|TMPRSS2|7113|transmembrane protease, serine 2##EU090249|TMPRSS2|7113|transmembrane protease, serine 2##HM245389|TMPRSS2|7113|transmembrane protease, serine 2##HM245390|TMPRSS2|7113|transmembrane protease, serine 2##AK291813|TMPRSS2|7113|transmembrane protease, serine 2##AK296860|TMPRSS2|7113|transmembrane protease, serine 2##NM_001135099|TMPRSS2|7113|transmembrane protease, serine 2##BC051839|TMPRSS2|7113|transmembrane protease, serine 2##AF270487|TMPRSS2|7113|transmembrane protease, serine 2##BC035623|TMPRSS2|7113|transmembrane protease, serine 2##EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4##NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15	0.895579	CTCF.p2:22:0.896
chr1	151507287	151507414	reg1015948.p1	9.313	+	NM_020770 AF263462 TSC_hg19_v1_chr1_+_151483892 AB037740 AK290007 BC152445 BC146657	-23454	+	TSC_hg19_v1_chr1_-_151431954 AJ242979 BX537838 NM_001194937 NM_001194938 NM_015100 NM_145796	-75419	-	TSC_hg19_v1_chr1_-_151431656 BX649163 AB037911 AB075477 AK000199 AK300307 BC057773 BX537561 AK299791 AK302501	-75674	-	TSC_hg19_v1_chr1_+_151512784 AF254260 NM_001126337 NM_020127 AK075001 AK299263 AK223161 AK298066 AK299925 AK315414 AL136917 AY358610 BC008301 BC002933 AB528295 AM393256 CU678909 DQ893190 DQ893683 DQ896805	5451	+	TSC_hg19_v1_chr1_+_151584550 BC012184 BC101822 BC101824 BC100998 BC101000 NM_030918	77238	+	BC100999 TSC_hg19_v1_chr1_+_151584664	77313	+	NM_020770|CGN|57530|cingulin##AF263462|CGN|57530|cingulin##AB037740|CGN|57530|cingulin##AK290007|CGN|57530|cingulin##BC152445|CGN|57530|cingulin##BC146657|CGN|57530|cingulin##AJ242979|POGZ|23126|pogo transposable element with ZNF domain##BX537838|POGZ|23126|pogo transposable element with ZNF domain##NM_001194937|POGZ|23126|pogo transposable element with ZNF domain##NM_001194938|POGZ|23126|pogo transposable element with ZNF domain##NM_015100|POGZ|23126|pogo transposable element with ZNF domain##NM_145796|POGZ|23126|pogo transposable element with ZNF domain##BX649163|POGZ|23126|pogo transposable element with ZNF domain##AB037911|POGZ|23126|pogo transposable element with ZNF domain##AB075477|POGZ|23126|pogo transposable element with ZNF domain##AK000199|POGZ|23126|pogo transposable element with ZNF domain##AK300307|POGZ|23126|pogo transposable element with ZNF domain##BC057773|POGZ|23126|pogo transposable element with ZNF domain##BX537561|POGZ|23126|pogo transposable element with ZNF domain##AK299791|POGZ|23126|pogo transposable element with ZNF domain##AK302501|POGZ|23126|pogo transposable element with ZNF domain##AF254260|TUFT1|7286|tuftelin 1##NM_001126337|TUFT1|7286|tuftelin 1##NM_020127|TUFT1|7286|tuftelin 1##AK075001|TUFT1|7286|tuftelin 1##AK299263|TUFT1|7286|tuftelin 1##AK223161|TUFT1|7286|tuftelin 1##AK298066|TUFT1|7286|tuftelin 1##AK299925|TUFT1|7286|tuftelin 1##AK315414|TUFT1|7286|tuftelin 1##AL136917|TUFT1|7286|tuftelin 1##AY358610|TUFT1|7286|tuftelin 1##BC008301|TUFT1|7286|tuftelin 1##BC002933|TUFT1|7286|tuftelin 1##AM393256|TUFT1|7286|tuftelin 1##DQ893190|TUFT1|7286|tuftelin 1##DQ893683|TUFT1|7286|tuftelin 1##DQ896805|TUFT1|7286|tuftelin 1##BC012184|SNX27|81609|sorting nexin family member 27##BC101822|SNX27|81609|sorting nexin family member 27##BC101824|SNX27|81609|sorting nexin family member 27##BC100998|SNX27|81609|sorting nexin family member 27##BC101000|SNX27|81609|sorting nexin family member 27##NM_030918|SNX27|81609|sorting nexin family member 27##BC100999|SNX27|81609|sorting nexin family member 27	0.991722	CTCF.p2:0:0.992
chr20	25450827	25450933	reg1012652.p1	9.313	+	TSC_hg19_v1_chr20_+_25388342 D80008 AK294593	-62530	+	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	-62558	+	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	-79354	-	TSC_hg19_v1_chr20_-_25566168 AB023197 EU718622 NM_025176 AK309298	115287	-	EU831914 EU832008 TSC_hg19_v1_chr20_-_25604651 BC022552 AK055472 AL833116 NM_152667	153738	-	BC034569 TSC_hg19_v1_chr20_+_25604757	153839	+	D80008|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##AK294593|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##AB023197|NINL|22981|ninein-like##EU718622|NINL|22981|ninein-like##NM_025176|NINL|22981|ninein-like##AK309298|NINL|22981|ninein-like##EU831914|NANP|140838|N-acetylneuraminic acid phosphatase##EU832008|NANP|140838|N-acetylneuraminic acid phosphatase##BC022552|NANP|140838|N-acetylneuraminic acid phosphatase##AK055472|NANP|140838|N-acetylneuraminic acid phosphatase##AL833116|NANP|140838|N-acetylneuraminic acid phosphatase##NM_152667|NANP|140838|N-acetylneuraminic acid phosphatase##BC034569|ZNF337|26152|zinc finger protein 337	0.402062	CTCF.p2:-31:0.402
chr6	148466172	148466312	reg1014060.p1	9.313	+	TSC_hg19_v1_chr6_+_147829825 NM_001030060	-636423	+	TSC_hg19_v1_chr6_+_147527118 AK128121	-939132	+	NM_001127715 NM_139244 AL834152 BC107737 BC113382 BC113408	-940686	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	197521	+	TSC_hg19_v1_chr6_+_148663973 AB018333	197748	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	197949	+	NM_001030060|SAMD5|389432|sterile alpha motif domain containing 5##AK128121|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001127715|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_139244|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AL834152|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC107737|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113382|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113408|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1	0.962169	CTCF.p2:3:0.962
chr15	83034567	83034668	reg1013275.p1	9.312	+	CR936602 NM_001164465	-16439	-	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-89727	+	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	-89825	+	NM_198181 CR936812	64124	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	174619	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	205918	-	CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	0.999886	CTCF.p2:-7:1.000
chr15	89974032	89974159	reg1011824.p1	9.312	+	TSC_hg19_v1_chr15_-_89878042 AK291281	-96052	-	BC050559 BC042571 NM_001126131 NM_002693 X98093 TSC_hg19_v1_chr15_-_89878036	-96074	-	TSC_hg19_v1_chr15_+_89787255 AK055176 BC140769 BC144483 BC004277	-186845	+	CU689056 AY257182 AF193809 NM_016321 BC015461 AK298252 AK298641 AF081497 AK301640 AK313238 BC030965 AK290899 AK310222	65700	-	TSC_hg19_v1_chr15_+_90118742 GQ227787 NM_152259	144683	+	TSC_hg19_v1_chr15_-_90198681 BC042063 NM_198525	224525	-	AK291281|POLG|5428|polymerase (DNA directed), gamma##BC050559|POLG|5428|polymerase (DNA directed), gamma##BC042571|POLG|5428|polymerase (DNA directed), gamma##NM_001126131|POLG|5428|polymerase (DNA directed), gamma##NM_002693|POLG|5428|polymerase (DNA directed), gamma##X98093|POLG|5428|polymerase (DNA directed), gamma##AK055176|FANCI|55215|Fanconi anemia, complementation group I##BC140769|FANCI|55215|Fanconi anemia, complementation group I##BC144483|FANCI|55215|Fanconi anemia, complementation group I##BC004277|FANCI|55215|Fanconi anemia, complementation group I##AY257182|RHCG|51458|Rh family, C glycoprotein##AF193809|RHCG|51458|Rh family, C glycoprotein##NM_016321|RHCG|51458|Rh family, C glycoprotein##BC015461|RHCG|51458|Rh family, C glycoprotein##AK298252|RHCG|51458|Rh family, C glycoprotein##AK298641|RHCG|51458|Rh family, C glycoprotein##AF081497|RHCG|51458|Rh family, C glycoprotein##AK301640|RHCG|51458|Rh family, C glycoprotein##AK313238|RHCG|51458|Rh family, C glycoprotein##BC030965|RHCG|51458|Rh family, C glycoprotein##AK290899|RHCG|51458|Rh family, C glycoprotein##AK310222|RHCG|51458|Rh family, C glycoprotein##GQ227787|C15orf42|90381|chromosome 15 open reading frame 42##NM_152259|C15orf42|90381|chromosome 15 open reading frame 42##BC042063|KIF7|374654|kinesin family member 7##NM_198525|KIF7|374654|kinesin family member 7	0.657695	CTCF.p2:16:0.658
chr5	60351390	60351490	reg1011170.p1	9.312	+	TSC_hg19_v1_chr5_+_60241003 AK026051 NM_174889 AF087990 AK291296 BC001753 BC070357 BC033965 AB183433	-110428	+	AB527753 BT020021 CR536563 TSC_hg19_v1_chr5_-_60240898 U28413 AK056931 AK304610 AK314511 BC009793 AK290726 AK294856 NM_000082	-110570	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	-211369	-	BC146876 BC146881 BC014242 BC047489 TSC_hg19_v1_chr5_-_60458209	106738	-	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	106827	-	TSC_hg19_v1_chr5_+_60628085 NM_020928	276658	+	AK026051|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_174889|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AF087990|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AK291296|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC001753|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC070357|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC033965|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AB183433|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BT020021|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##CR536563|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##U28413|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK056931|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK304610|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK314511|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##BC009793|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK290726|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK294856|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##NM_000082|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7##BC146876|C5orf43|643155|chromosome 5 open reading frame 43##BC146881|C5orf43|643155|chromosome 5 open reading frame 43##BC014242|C5orf43|643155|chromosome 5 open reading frame 43##BC047489|C5orf43|643155|chromosome 5 open reading frame 43##BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6	0.0	
chr11	74160493	74160620	reg1013632.p1	9.311	+	TSC_hg19_v1_chr11_-_74109469 BC027950 AB019210 AK056591 BC059360 NM_173582	-51066	-	BC089446 TSC_hg19_v1_chr11_-_74022686 BC040582 AL833965 AY358521 AK300598 AY327887 BC117333 BC126170 AY313448 NM_182904	-137874	-	TSC_hg19_v1_chr11_+_73882440 AB385584 CU678344 DQ892348 DQ895778	-278101	+	CR936625 DQ192291 NM_005472	18040	-	TSC_hg19_v1_chr11_-_74204756 NM_001144869	44194	-	AK302677 AK316370 D26018 NM_006591 TSC_hg19_v1_chr11_+_74303654 BC092454 AK316301 BC108908 BC108909 BC032636 BC058840 BC041703 AB383722	143107	+	AB019210|PGM2L1|283209|phosphoglucomutase 2-like 1##AK056591|PGM2L1|283209|phosphoglucomutase 2-like 1##BC059360|PGM2L1|283209|phosphoglucomutase 2-like 1##NM_173582|PGM2L1|283209|phosphoglucomutase 2-like 1##BC089446|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC040582|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AL833965|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY358521|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AK300598|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY327887|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC117333|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC126170|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY313448|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##NM_182904|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##DQ892348|PPME1|51400|protein phosphatase methylesterase 1##DQ895778|PPME1|51400|protein phosphatase methylesterase 1##CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_001144869|LIPT2|387787|lipoyl(octanoyl) transferase 2 (putative)##AK302677|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316370|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##D26018|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_006591|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC092454|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316301|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108908|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108909|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC032636|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC058840|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC041703|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit	0.851997	CTCF.p2:4:0.852
chr12	42876693	42876839	reg1012907.p1	9.311	+	AK129910 AK303612 NM_001143787 NM_001143788 NM_001143789 NM_016488 NM_201438 NM_201439 NM_201440 NM_201515 TSC_hg19_v1_chr12_+_42719974 AY157850 AK055690 AK056622 AK299951 AY039238 AK303680 AF151066 AK308022 AK299682 BC015322 BC025306 BC039832 BC040449 AF151040 BC033753	-156788	+	AK308244 TSC_hg19_v1_chr12_-_42719921 BC005099 BC010177 BC022543 AB062361 NM_033114	-156891	-	NM_001190979 NM_001190980 NM_005748 TSC_hg19_v1_chr12_-_42632167	-244595	-	TSC_hg19_v1_chr12_-_42877418 AK122877 NM_001144881	650	-	AK122881 TSC_hg19_v1_chr12_-_42877772	992	-	TSC_hg19_v1_chr12_-_42877811 NM_001144882 NM_001144883	1033	-	AK129910|PPHLN1|51535|periphilin 1##AK303612|PPHLN1|51535|periphilin 1##NM_001143787|PPHLN1|51535|periphilin 1##NM_001143788|PPHLN1|51535|periphilin 1##NM_001143789|PPHLN1|51535|periphilin 1##NM_016488|PPHLN1|51535|periphilin 1##NM_201438|PPHLN1|51535|periphilin 1##NM_201439|PPHLN1|51535|periphilin 1##NM_201440|PPHLN1|51535|periphilin 1##NM_201515|PPHLN1|51535|periphilin 1##AY157850|PPHLN1|51535|periphilin 1##AK055690|PPHLN1|51535|periphilin 1##AK056622|PPHLN1|51535|periphilin 1##AK299951|PPHLN1|51535|periphilin 1##AY039238|PPHLN1|51535|periphilin 1##AK303680|PPHLN1|51535|periphilin 1##AF151066|PPHLN1|51535|periphilin 1##AK308022|PPHLN1|51535|periphilin 1##BC015322|PPHLN1|51535|periphilin 1##BC025306|PPHLN1|51535|periphilin 1##BC039832|PPHLN1|51535|periphilin 1##BC040449|PPHLN1|51535|periphilin 1##AF151040|PPHLN1|51535|periphilin 1##AK308244|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC005099|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC010177|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC022543|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##AB062361|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##NM_033114|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##NM_001190979|YAF2|10138|YY1 associated factor 2##NM_001190980|YAF2|10138|YY1 associated factor 2##NM_005748|YAF2|10138|YY1 associated factor 2##AK122877|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)	0.87461	CTCF.p2:-1:0.875
chr4	180949972	180950079	reg1012526.p2	9.311	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-2586382	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-2586432	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-2586484	-	TSC_hg19_v1_chr4_+_183065111 AK308489	2115100	+	NM_001080477 HE578284 HE578285	2295129	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	2888505	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.339661	CTCF.p2:6:0.340
chr5	63908298	63908443	reg1016735.p1	9.311	+	BC140707 NM_001029875 BX640900	-105889	+	TSC_hg19_v1_chr5_+_63461666 AK090756 AX746601 NM_001113561 NM_178532 BC101277 BC101278 BC101279 AL832580 BC101397	-446689	+	AK314187 TSC_hg19_v1_chr5_-_63258084	-650348	-	NM_001164442 TSC_hg19_v1_chr5_+_63986235	77815	+	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	156076	-	TSC_hg19_v1_chr5_-_64064491 AK094073 AX748442 NM_173829	156134	-	BC140707|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001029875|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##BX640900|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##AK090756|RNF180|285671|ring finger protein 180##NM_001113561|RNF180|285671|ring finger protein 180##NM_178532|RNF180|285671|ring finger protein 180##BC101277|RNF180|285671|ring finger protein 180##BC101278|RNF180|285671|ring finger protein 180##BC101279|RNF180|285671|ring finger protein 180##AL832580|RNF180|285671|ring finger protein 180##BC101397|RNF180|285671|ring finger protein 180##AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_001164442|FAM159B|100132916|family with sequence similarity 159, member B##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1##AK094073|SREK1IP1|285672|SREK1-interacting protein 1##NM_173829|SREK1IP1|285672|SREK1-interacting protein 1	0.969266	CTCF.p2:13:0.969
chr6	158088319	158088422	reg1009710.p1	9.311	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-285831	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-343153	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-343786	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	155919	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	156004	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	314517	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.89941	CTCF.p2:19:0.899
chr2	198056328	198056418	reg1010439.p1	9.310	+	AB128038 AB527353 TSC_hg19_v1_chr2_-_197791382 BX648642 AK022439 NM_024989 BC040517	-264929	-	BC137150 BC137151 AY358249 NM_213608	-381436	-	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	-391960	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	119009	-	TSC_hg19_v1_chr2_-_198175459 BC063622	119100	-	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	119146	-	AB128038|PGAP1|80055|post-GPI attachment to proteins 1##BX648642|PGAP1|80055|post-GPI attachment to proteins 1##AK022439|PGAP1|80055|post-GPI attachment to proteins 1##NM_024989|PGAP1|80055|post-GPI attachment to proteins 1##BC040517|PGAP1|80055|post-GPI attachment to proteins 1##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK124039|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44	0.870962	CTCF.p2:-13:0.871
chr3	33829040	33829150	reg1012344.p2	9.310	+	TSC_hg19_v1_chr3_-_33759747 AK091451 AX746992	-69300	-	TSC_hg19_v1_chr3_-_33759706 NM_015097	-69400	-	BC140778 TSC_hg19_v1_chr3_-_33759667	-69491	-	TSC_hg19_v1_chr3_+_33840062 NM_001162429 NM_013374	10968	+	TSC_hg19_v1_chr3_+_33840081 BC068454 AF349951	10988	+	TSC_hg19_v1_chr3_+_33840120 AF151793 BC020066	11012	+	AK091451|CLASP2|23122|cytoplasmic linker associated protein 2##NM_015097|CLASP2|23122|cytoplasmic linker associated protein 2##BC140778|CLASP2|23122|cytoplasmic linker associated protein 2##NM_001162429|PDCD6IP|10015|programmed cell death 6 interacting protein##NM_013374|PDCD6IP|10015|programmed cell death 6 interacting protein##BC068454|PDCD6IP|10015|programmed cell death 6 interacting protein##AF349951|PDCD6IP|10015|programmed cell death 6 interacting protein##AF151793|PDCD6IP|10015|programmed cell death 6 interacting protein##BC020066|PDCD6IP|10015|programmed cell death 6 interacting protein	0.486671	CTCF.p2:-1:0.487
chr2	178354566	178354701	reg1012587.p1	9.309	+	TSC_hg19_v1_chr2_+_178257497 AK225439 AK314259 Y09443 BC141820 AY544121 AK296239 AK316240	-97004	+	AK309714 TSC_hg19_v1_chr2_+_178257487 NM_003659	-97204	+	TSC_hg19_v1_chr2_-_178257411 BC093095 AL833088 AK126517	-97226	-	TSC_hg19_v1_chr2_-_178417525 AK296828 AK055552 BC033795 NM_152517	62852	-	TSC_hg19_v1_chr2_-_178483463 CU692122 AK057530 AK125104 BC048006	128795	-	AK292395 BC042848 NM_152275	129052	-	AK314259|AGPS|8540|alkylglycerone phosphate synthase##Y09443|AGPS|8540|alkylglycerone phosphate synthase##BC141820|AGPS|8540|alkylglycerone phosphate synthase##AY544121|AGPS|8540|alkylglycerone phosphate synthase##AK296239|AGPS|8540|alkylglycerone phosphate synthase##AK316240|AGPS|8540|alkylglycerone phosphate synthase##AK309714|AGPS|8540|alkylglycerone phosphate synthase##NM_003659|AGPS|8540|alkylglycerone phosphate synthase##AL833088|LOC100130691|100130691|uncharacterized LOC100130691##AK126517|LOC100130691|100130691|uncharacterized LOC100130691##AK296828|TTC30B|150737|tetratricopeptide repeat domain 30B##AK055552|TTC30B|150737|tetratricopeptide repeat domain 30B##BC033795|TTC30B|150737|tetratricopeptide repeat domain 30B##NM_152517|TTC30B|150737|tetratricopeptide repeat domain 30B##AK057530|TTC30A|92104|tetratricopeptide repeat domain 30A##AK125104|TTC30A|92104|tetratricopeptide repeat domain 30A##BC048006|TTC30A|92104|tetratricopeptide repeat domain 30A##AK292395|TTC30A|92104|tetratricopeptide repeat domain 30A##BC042848|TTC30A|92104|tetratricopeptide repeat domain 30A##NM_152275|TTC30A|92104|tetratricopeptide repeat domain 30A	0.850144	CTCF.p2:-6:0.850
chr5	157282557	157282660	reg1012787.p1	9.308	+	AK055297 TSC_hg19_v1_chr5_+_157184422	-98228	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-111868	+	AY463216 NM_017872 TSC_hg19_v1_chr5_+_157158427 AK000553 AK223119 AK304590 BC023521 AL136669 AK021663 AB528251 AM392629 CR533503 BC001523 BC001852 CU674750	-124180	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	3482	-	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	1243849	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	1244134	-	BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AY463216|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##NM_017872|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK000553|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK223119|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK304590|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC023521|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AL136669|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK021663|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##CR533503|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001523|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001852|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1	0.783717	CTCF.p2:-1:0.260	CTCF.p2:-2:0.523
chr11	192112	192226	reg1012608.p1	9.307	+	None	None	None	None	None	None	None	None	None	AY026938 BC069287 NM_001097610 NM_145651 BC111427 BC111433 AB590098 AM392647 AM393773 AM393805	919	+	NM_053280 AY713299 AL133658	4608	+	EU832497 EU832578 TSC_hg19_v1_chr11_-_207355	15182	-	AY026938|SCGB1C1|147199|secretoglobin, family 1C, member 1##BC069287|SCGB1C1|147199|secretoglobin, family 1C, member 1##NM_001097610|LOC653486|653486|secretoglobin, family 1C, member 1-like##NM_145651|SCGB1C1|147199|secretoglobin, family 1C, member 1##BC111427|SCGB1C1|147199|secretoglobin, family 1C, member 1##BC111433|SCGB1C1|147199|secretoglobin, family 1C, member 1##AM392647|SCGB1C1|147199|secretoglobin, family 1C, member 1##AM393773|SCGB1C1|147199|secretoglobin, family 1C, member 1##AM393805|SCGB1C1|147199|secretoglobin, family 1C, member 1##NM_053280|ODF3|113746|outer dense fiber of sperm tails 3##AY713299|ODF3|113746|outer dense fiber of sperm tails 3##AL133658|ODF3|113746|outer dense fiber of sperm tails 3##EU832497|BET1L|51272|blocked early in transport 1 homolog (S. cerevisiae)-like##EU832578|BET1L|51272|blocked early in transport 1 homolog (S. cerevisiae)-like	0.999658	CTCF.p2:10:1.000
chr11	11811420	11811546	reg1013692.p1	9.305	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	-167905	-	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-931697	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-931965	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	51533	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	52008	+	TSC_hg19_v1_chr11_+_11863521 BC071559 AK027362 AK092290 AX747455	52085	+	AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47##BC071559|USP47|55031|ubiquitin specific peptidase 47##AK027362|USP47|55031|ubiquitin specific peptidase 47##AK092290|USP47|55031|ubiquitin specific peptidase 47	0.119704	
chr19	56577903	56578018	reg1011891.p1	9.305	+	AB527195 AY054986 AY154460 NM_153447	-66870	+	NM_176811 AB527377 AY154463	-118728	+	AB527194 AY154468 NM_176810	-134272	-	TSC_hg19_v1_chr19_-_56632629 BC037737	54654	-	TSC_hg19_v1_chr19_-_56632646 BC012495 BC077728 NM_001002836	54686	-	TSC_hg19_v1_chr19_+_56652664 NM_001253792 NM_018337 AL834130 AK223408	74645	+	AY054986|NLRP5|126206|NLR family, pyrin domain containing 5##AY154460|NLRP5|126206|NLR family, pyrin domain containing 5##NM_153447|NLRP5|126206|NLR family, pyrin domain containing 5##NM_176811|NLRP8|126205|NLR family, pyrin domain containing 8##AY154463|NLRP8|126205|NLR family, pyrin domain containing 8##AY154468|NLRP13|126204|NLR family, pyrin domain containing 13##NM_176810|NLRP13|126204|NLR family, pyrin domain containing 13##BC037737|ZNF787|126208|zinc finger protein 787##BC012495|ZNF787|126208|zinc finger protein 787##BC077728|ZNF787|126208|zinc finger protein 787##NM_001002836|ZNF787|126208|zinc finger protein 787##NM_001253792|ZNF444|55311|zinc finger protein 444##NM_018337|ZNF444|55311|zinc finger protein 444##AL834130|ZNF444|55311|zinc finger protein 444##AK223408|ZNF444|55311|zinc finger protein 444	0.948001	CTCF.p2:4:0.948
chr8	109902736	109902862	reg1012532.p1	9.305	+	AK055230 NM_153015 BC033057 BC030710	-102993	-	TSC_hg19_v1_chr8_+_109455874 AK290974 D14659 AB384437 CR457402 CU676696 CU692380 HQ447150	-446919	+	TSC_hg19_v1_chr8_+_109455865 BC021667 NM_014673 AK222615 BC007027 BC020753	-446947	+	BC105045 BC113360 NM_003301 X72089 D16845 AY493373 HQ258206 X75071	196897	+	AF283302 AK311583 AF521133 NM_001128211 AK307663	439335	-	AK301278 TSC_hg19_v1_chr8_-_110346317 BC000967 AK027897 BC043406 AK315006 BC031258 NM_032869 AF283301	443572	-	AK055230|TMEM74|157753|transmembrane protein 74##NM_153015|TMEM74|157753|transmembrane protein 74##BC030710|TMEM74|157753|transmembrane protein 74##AK290974|TTC35|9694|tetratricopeptide repeat domain 35##D14659|TTC35|9694|tetratricopeptide repeat domain 35##CR457402|TTC35|9694|tetratricopeptide repeat domain 35##HQ447150|TTC35|9694|tetratricopeptide repeat domain 35##BC021667|TTC35|9694|tetratricopeptide repeat domain 35##NM_014673|TTC35|9694|tetratricopeptide repeat domain 35##AK222615|TTC35|9694|tetratricopeptide repeat domain 35##BC007027|TTC35|9694|tetratricopeptide repeat domain 35##BC020753|TTC35|9694|tetratricopeptide repeat domain 35##BC105045|TRHR|7201|thyrotropin-releasing hormone receptor##BC113360|TRHR|7201|thyrotropin-releasing hormone receptor##NM_003301|TRHR|7201|thyrotropin-releasing hormone receptor##X72089|TRHR|7201|thyrotropin-releasing hormone receptor##D16845|TRHR|7201|thyrotropin-releasing hormone receptor##AY493373|TRHR|7201|thyrotropin-releasing hormone receptor##HQ258206|TRHR|7201|thyrotropin-releasing hormone receptor##X75071|TRHR|7201|thyrotropin-releasing hormone receptor##AF283302|NUDCD1|84955|NudC domain containing 1##AK311583|NUDCD1|84955|NudC domain containing 1##AF521133|NUDCD1|84955|NudC domain containing 1##NM_001128211|NUDCD1|84955|NudC domain containing 1##AK307663|NUDCD1|84955|NudC domain containing 1##AK301278|NUDCD1|84955|NudC domain containing 1##BC000967|NUDCD1|84955|NudC domain containing 1##AK027897|NUDCD1|84955|NudC domain containing 1##BC043406|NUDCD1|84955|NudC domain containing 1##AK315006|NUDCD1|84955|NudC domain containing 1##BC031258|NUDCD1|84955|NudC domain containing 1##NM_032869|NUDCD1|84955|NudC domain containing 1##AF283301|NUDCD1|84955|NudC domain containing 1	0.149149	
chrX	109100255	109100389	reg1013832.p1	9.305	+	TSC_hg19_v1_chrX_-_108976528 AB061713 AK292070 AF030555 NM_004458 NM_022977	-123758	-	TSC_hg19_v1_chrX_-_108976464 Y12777 Y13058 AB061714 BC034959 AK307566 AK294915	-123843	-	DQ891287 DQ894471 DQ896649 DQ896656 DQ896659 DQ896664 EF535525 BC035330 AJ012743 NM_012282 AK223306 AK314923 DQ192294 TSC_hg19_v1_chrX_-_108868398	-231998	-	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	145548	+	TSC_hg19_v1_chrX_+_109246341 NM_032227 AK026332	146018	+	TSC_hg19_v1_chrX_+_109246360 BC085605	146033	+	AB061713|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK292070|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AF030555|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_004458|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_022977|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y12777|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y13058|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061714|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##BC034959|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK307566|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK294915|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##DQ891287|KCNE1L|23630|KCNE1-like##DQ894471|KCNE1L|23630|KCNE1-like##DQ896649|KCNE1L|23630|KCNE1-like##DQ896656|KCNE1L|23630|KCNE1-like##DQ896659|KCNE1L|23630|KCNE1-like##DQ896664|KCNE1L|23630|KCNE1-like##EF535525|KCNE1L|23630|KCNE1-like##BC035330|KCNE1L|23630|KCNE1-like##AJ012743|KCNE1L|23630|KCNE1-like##NM_012282|KCNE1L|23630|KCNE1-like##AK223306|KCNE1L|23630|KCNE1-like##AK314923|KCNE1L|23630|KCNE1-like##DQ192294|KCNE1L|23630|KCNE1-like##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164##NM_032227|TMEM164|84187|transmembrane protein 164##AK026332|TMEM164|84187|transmembrane protein 164##BC085605|TMEM164|84187|transmembrane protein 164	0.903743	CTCF.p2:0:0.904
chr1	219834501	219834637	reg1012042.p1	9.303	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-487327	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-487411	+	M19154 TSC_hg19_v1_chr1_+_218519634	-1314964	+	BC036078 TSC_hg19_v1_chr1_-_220101540	266960	-	AB464233 TSC_hg19_v1_chr1_-_220101784	267222	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	267396	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.634568	CTCF.p2:9:0.609
chr16	31472122	31472270	reg1015687.p1	9.303	+	TSC_hg19_v1_chr16_-_31470650 AK125571	-1336	-	TSC_hg19_v1_chr16_+_31470830 AK024430	-1370	+	TSC_hg19_v1_chr16_+_31470117 AK294897 AY217348 NM_001105247 NM_024742 BC014945	-1941	+	TSC_hg19_v1_chr16_+_31483494 AK313327 NM_001042454 AK122975 AB464307 BC017288 NM_001164719	11109	+	BC041840 BC041817 TSC_hg19_v1_chr16_-_31483467	11252	-	TSC_hg19_v1_chr16_+_31484499 BC001507 BC001830 NM_015927	12315	+	AK024430|ARMC5|79798|armadillo repeat containing 5##AK294897|ARMC5|79798|armadillo repeat containing 5##AY217348|ARMC5|79798|armadillo repeat containing 5##NM_001105247|ARMC5|79798|armadillo repeat containing 5##NM_024742|ARMC5|79798|armadillo repeat containing 5##BC014945|ARMC5|79798|armadillo repeat containing 5##AK313327|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##NM_001042454|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##AK122975|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##BC017288|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##NM_001164719|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##BC001507|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##BC001830|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##NM_015927|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	0.992021	CTCF.p2:-1:0.992
chr6	4156248	4156348	reg1011211.p1	9.303	+	TSC_hg19_v1_chr6_+_4136242 AK092451	-20025	+	BC034702 NM_001166010 TSC_hg19_v1_chr6_-_4135810 AF244138 AF153612 EU832093 EU832185 AF069301 BC033841 AF257175 BC025287 EU832094 EU832186 BC017474 BC008458 AL136642 BC016781 AK222617 BC002668 AK075108 AK223003 AK297049 AK057175 NM_006117 NM_206836	-20533	-	NM_001085401 BC047663 BC066986	-76854	+	TSC_hg19_v1_chr6_+_4776647 AK291601 BC108725 NM_004824	620362	+	TSC_hg19_v1_chr6_+_4776889 BC119682	620623	+	AK296985 NM_001143970	680033	+	AK092451|LOC100507506|100507506|uncharacterized LOC100507506##BC034702|ECI2|10455|enoyl-CoA delta isomerase 2##NM_001166010|ECI2|10455|enoyl-CoA delta isomerase 2##AF244138|ECI2|10455|enoyl-CoA delta isomerase 2##AF153612|ECI2|10455|enoyl-CoA delta isomerase 2##EU832093|ECI2|10455|enoyl-CoA delta isomerase 2##EU832185|ECI2|10455|enoyl-CoA delta isomerase 2##AF069301|ECI2|10455|enoyl-CoA delta isomerase 2##BC033841|ECI2|10455|enoyl-CoA delta isomerase 2##AF257175|ECI2|10455|enoyl-CoA delta isomerase 2##BC025287|ECI2|10455|enoyl-CoA delta isomerase 2##EU832094|ECI2|10455|enoyl-CoA delta isomerase 2##EU832186|ECI2|10455|enoyl-CoA delta isomerase 2##BC017474|ECI2|10455|enoyl-CoA delta isomerase 2##BC008458|ECI2|10455|enoyl-CoA delta isomerase 2##AL136642|ECI2|10455|enoyl-CoA delta isomerase 2##BC016781|ECI2|10455|enoyl-CoA delta isomerase 2##AK222617|ECI2|10455|enoyl-CoA delta isomerase 2##BC002668|ECI2|10455|enoyl-CoA delta isomerase 2##AK075108|ECI2|10455|enoyl-CoA delta isomerase 2##AK223003|ECI2|10455|enoyl-CoA delta isomerase 2##AK297049|ECI2|10455|enoyl-CoA delta isomerase 2##AK057175|ECI2|10455|enoyl-CoA delta isomerase 2##NM_006117|ECI2|10455|enoyl-CoA delta isomerase 2##NM_206836|ECI2|10455|enoyl-CoA delta isomerase 2##NM_001085401|C6orf201|404220|chromosome 6 open reading frame 201##BC047663|C6orf201|404220|chromosome 6 open reading frame 201##BC066986|C6orf201|404220|chromosome 6 open reading frame 201##AK291601|CDYL|9425|chromodomain protein, Y-like##BC108725|CDYL|9425|chromodomain protein, Y-like##NM_004824|CDYL|9425|chromodomain protein, Y-like##BC119682|CDYL|9425|chromodomain protein, Y-like##AK296985|CDYL|9425|chromodomain protein, Y-like##NM_001143970|CDYL|9425|chromodomain protein, Y-like	0.99452	CTCF.p2:10:0.995
chr9	12819966	12820065	reg1014527.p1	9.303	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	-44234	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	-44999	+	NM_000550 X51420 BC052608	-126590	+	AB384682 AF093419 BC140793 BC144564 NM_003829	430323	-	AB210041 TSC_hg19_v1_chr9_-_13279602	459567	-	BX537698 TSC_hg19_v1_chr9_-_14087002	1266937	-	HQ257895|C9orf150|286343|chromosome 9 open reading frame 150##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##AF093419|MPDZ|8777|multiple PDZ domain protein##BC140793|MPDZ|8777|multiple PDZ domain protein##BC144564|MPDZ|8777|multiple PDZ domain protein##NM_003829|MPDZ|8777|multiple PDZ domain protein##AB210041|MPDZ|8777|multiple PDZ domain protein##BX537698|NFIB|4781|nuclear factor I/B	0.011675	
chr17	13501191	13501289	reg1012302.p1	9.302	+	TSC_hg19_v1_chr17_-_12921332 AK001392 NM_001165962 NM_018127 NM_173717	-579884	-	TSC_hg19_v1_chr17_-_12921325 AK298397 AK094687 BC001939 BC004158	-579921	-	TSC_hg19_v1_chr17_-_12921295 AK300011 AF304370 CR457261 CU674942	-579964	-	AY358838 TSC_hg19_v1_chr17_-_13505228 AF105376 NM_006042 AK292047	3997	-	TSC_hg19_v1_chr17_-_13972756 AK123100	471522	-	NM_001303 TSC_hg19_v1_chr17_+_13972839 AK312718	471539	+	AK001392|ELAC2|60528|elaC homolog 2 (E. coli)##NM_001165962|ELAC2|60528|elaC homolog 2 (E. coli)##NM_018127|ELAC2|60528|elaC homolog 2 (E. coli)##NM_173717|ELAC2|60528|elaC homolog 2 (E. coli)##AK298397|ELAC2|60528|elaC homolog 2 (E. coli)##AK094687|ELAC2|60528|elaC homolog 2 (E. coli)##BC001939|ELAC2|60528|elaC homolog 2 (E. coli)##BC004158|ELAC2|60528|elaC homolog 2 (E. coli)##AK300011|ELAC2|60528|elaC homolog 2 (E. coli)##AF304370|ELAC2|60528|elaC homolog 2 (E. coli)##CR457261|ELAC2|60528|elaC homolog 2 (E. coli)##AY358838|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AF105376|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_006042|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AK292047|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_001303|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK312718|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	0.977824	CTCF.p2:4:0.978
chr17	50184154	50184264	reg1012704.p2	9.301	+	AF151806 TSC_hg19_v1_chr17_+_49337913 AK314399 BC025276 BC001535	-846284	+	TSC_hg19_v1_chr17_+_49337906 NM_016001	-846310	+	TSC_hg19_v1_chr17_+_49337888 AK026355	-846323	+	TSC_hg19_v1_chr17_-_50235676 AK294652 AK313001	51479	-	TSC_hg19_v1_chr17_-_50236075 BC047456 BC068462	51831	-	CR936674 TSC_hg19_v1_chr17_-_50236127 NM_020178	51929	-	AF151806|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK314399|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC025276|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC001535|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##NM_016001|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK026355|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK294652|CA10|56934|carbonic anhydrase X##AK313001|CA10|56934|carbonic anhydrase X##BC047456|CA10|56934|carbonic anhydrase X##BC068462|CA10|56934|carbonic anhydrase X##NM_020178|CA10|56934|carbonic anhydrase X	0.998089	CTCF.p2:-10:0.998
chr9	72726025	72726150	reg1015098.p1	9.301	+	AK304040 TSC_hg19_v1_chr9_+_72658764 BC016383 AK304531	-67266	+	BC040299 BC045569 NM_153267 BC063634	-67580	+	NM_001010940 BC150564 BC136709 BC144373 BC144374 BC144375	-290351	+	TSC_hg19_v1_chr9_-_72873739 CR936772 AK124136 BC040840	147677	-	TSC_hg19_v1_chr9_+_72873893 AK304133 NM_015110	147773	+	BC038225 TSC_hg19_v1_chr9_+_72873908 BC017666 AB011166 AK055825	147851	+	AK304040|MAMDC2|256691|MAM domain containing 2##BC016383|MAMDC2|256691|MAM domain containing 2##AK304531|MAMDC2|256691|MAM domain containing 2##BC040299|MAMDC2|256691|MAM domain containing 2##BC045569|MAMDC2|256691|MAM domain containing 2##NM_153267|MAMDC2|256691|MAM domain containing 2##BC063634|MAMDC2|256691|MAM domain containing 2##NM_001010940|C9orf135|138255|chromosome 9 open reading frame 135##BC150564|C9orf135|138255|chromosome 9 open reading frame 135##BC136709|C9orf135|138255|chromosome 9 open reading frame 135##BC144373|C9orf135|138255|chromosome 9 open reading frame 135##BC144374|C9orf135|138255|chromosome 9 open reading frame 135##BC144375|C9orf135|138255|chromosome 9 open reading frame 135##CR936772|LOC100507299|100507299|uncharacterized LOC100507299##AK124136|LOC100507299|100507299|uncharacterized LOC100507299##BC040840|LOC100507299|100507299|uncharacterized LOC100507299##AK304133|SMC5|23137|structural maintenance of chromosomes 5##NM_015110|SMC5|23137|structural maintenance of chromosomes 5##BC038225|SMC5|23137|structural maintenance of chromosomes 5##BC017666|SMC5|23137|structural maintenance of chromosomes 5##AB011166|SMC5|23137|structural maintenance of chromosomes 5##AK055825|SMC5|23137|structural maintenance of chromosomes 5	0.998217	CTCF.p2:2:0.998
chr10	27847594	27847694	reg1010921.p1	9.300	+	TSC_hg19_v1_chr10_+_27793232 AY574034 AK295443 AK297629 AK299457 BC029350 AF087860 BC015014 NM_021252 AL136734 AK223153 AB464117 AF137372 AF498950 AK001555 AM393142 BT009840 CR533455 CU677165	-54415	+	JF332167 BC107139 AK126025 NM_001034842	-144407	-	TSC_hg19_v1_chr10_-_27531041 AK057469 AF505653 NM_001042473	-316562	-	BC036207 TSC_hg19_v1_chr10_-_28034752 AK125339 NM_001242702 NM_173576	187117	-	AK292521 TSC_hg19_v1_chr10_-_28287879 AK001679 NM_018076 BC085611	440240	-	BC038105 AK057360 NM_173496	723396	-	AY574034|RAB18|22931|RAB18, member RAS oncogene family##AK295443|RAB18|22931|RAB18, member RAS oncogene family##AK297629|RAB18|22931|RAB18, member RAS oncogene family##AK299457|RAB18|22931|RAB18, member RAS oncogene family##BC029350|RAB18|22931|RAB18, member RAS oncogene family##AF087860|RAB18|22931|RAB18, member RAS oncogene family##BC015014|RAB18|22931|RAB18, member RAS oncogene family##NM_021252|RAB18|22931|RAB18, member RAS oncogene family##AL136734|RAB18|22931|RAB18, member RAS oncogene family##AK223153|RAB18|22931|RAB18, member RAS oncogene family##AF137372|RAB18|22931|RAB18, member RAS oncogene family##AF498950|RAB18|22931|RAB18, member RAS oncogene family##AK001555|RAB18|22931|RAB18, member RAS oncogene family##AM393142|RAB18|22931|RAB18, member RAS oncogene family##BT009840|RAB18|22931|RAB18, member RAS oncogene family##CR533455|RAB18|22931|RAB18, member RAS oncogene family##JF332167|PTCHD3|374308|patched domain containing 3##BC107139|PTCHD3|374308|patched domain containing 3##AK126025|PTCHD3|374308|patched domain containing 3##NM_001034842|PTCHD3|374308|patched domain containing 3##AK057469|ACBD5|91452|acyl-CoA binding domain containing 5##AF505653|ACBD5|91452|acyl-CoA binding domain containing 5##NM_001042473|ACBD5|91452|acyl-CoA binding domain containing 5##BC036207|MKX|283078|mohawk homeobox##AK125339|MKX|283078|mohawk homeobox##NM_001242702|MKX|283078|mohawk homeobox##NM_173576|MKX|283078|mohawk homeobox##AK292521|ARMC4|55130|armadillo repeat containing 4##AK001679|ARMC4|55130|armadillo repeat containing 4##NM_018076|ARMC4|55130|armadillo repeat containing 4##BC085611|ARMC4|55130|armadillo repeat containing 4##BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	0.401434	CTCF.p2:-8:0.401
chr10	74088146	74088303	reg1013331.p1	9.300	+	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-54400	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-112113	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-112436	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	26454	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	26702	-	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	195495	-	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1	0.499549	CTCF.p2:22:0.500
chr15	99640887	99641010	reg1013525.p1	9.300	+	AK058162 NM_001167902	-89925	-	BC104743 BC104744 BC105686 NM_001102612	-92111	-	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-448192	+	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	4292	+	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	148758	-	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	150468	-	AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23	0.0	
chr18	66327756	66327861	reg1012012.p2	9.300	+	TSC_hg19_v1_chr18_-_65183956 NM_032160	-1143862	-	AK021849 TSC_hg19_v1_chr18_-_65182656	-1145225	-	AJ007607 NM_021153 AK304000 AK315257 BC015877	-2056497	-	AM393206 AM393295 CU689334 TSC_hg19_v1_chr18_-_66382307 AK307269 AK295551 BC032325 AL832341 AL832356 BC093792 BC093794 BC143400 AB058733	54458	-	TSC_hg19_v1_chr18_-_66382346 AK122715 BC107422 NM_019022 BX647846 AK310389	54628	-	NM_001093729 AK308114 AK091108	54711	+	NM_032160|DSEL|92126|dermatan sulfate epimerase-like##AK021849|DSEL|92126|dermatan sulfate epimerase-like##AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AM393206|TMX3|54495|thioredoxin-related transmembrane protein 3##AM393295|TMX3|54495|thioredoxin-related transmembrane protein 3##AK307269|TMX3|54495|thioredoxin-related transmembrane protein 3##AK295551|TMX3|54495|thioredoxin-related transmembrane protein 3##BC032325|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832341|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832356|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093792|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093794|TMX3|54495|thioredoxin-related transmembrane protein 3##BC143400|TMX3|54495|thioredoxin-related transmembrane protein 3##AB058733|TMX3|54495|thioredoxin-related transmembrane protein 3##AK122715|TMX3|54495|thioredoxin-related transmembrane protein 3##BC107422|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_019022|TMX3|54495|thioredoxin-related transmembrane protein 3##BX647846|TMX3|54495|thioredoxin-related transmembrane protein 3##AK310389|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_001093729|CCDC102B|79839|coiled-coil domain containing 102B##AK308114|CCDC102B|79839|coiled-coil domain containing 102B##AK091108|CCDC102B|79839|coiled-coil domain containing 102B	0.868824	CTCF.p2:-1:0.869
chr3	142648116	142648224	reg1013155.p2	9.300	+	CR536570 TSC_hg19_v1_chr3_-_142607926 AB528798 AF098269 BC006265 AK315121 AY035400 AK223633 AY358557 AK075478 NM_013363	-40274	-	TSC_hg19_v1_chr3_+_142443214 NM_001251845 NM_003304 X89066 BC112338 BC113953 AB255425	-204863	+	TSC_hg19_v1_chr3_+_142442891 Z73903	-205238	+	AK123932 BC118666 BC122527 NM_198504 AY424287	34045	-	TSC_hg19_v1_chr3_+_142682794 BC062727	34660	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	72260	+	CR536570|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AF098269|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##BC006265|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK315121|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AY035400|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK223633|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AY358557|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK075478|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##NM_013363|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##NM_001251845|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##NM_003304|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##X89066|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##BC112338|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##BC113953|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##AB255425|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##AK123932|PAQR9|344838|progestin and adipoQ receptor family member IX##BC118666|PAQR9|344838|progestin and adipoQ receptor family member IX##BC122527|PAQR9|344838|progestin and adipoQ receptor family member IX##NM_198504|PAQR9|344838|progestin and adipoQ receptor family member IX##AY424287|PAQR9|344838|progestin and adipoQ receptor family member IX##BC062727|U2SURP|23350|U2 snRNP-associated SURP domain containing##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing	0.912962	CTCF.p2:-8:0.913
chr6	158939692	158939820	reg1013050.p2	9.300	+	TSC_hg19_v1_chr6_+_158734935 AF087973	-204837	+	AK304056 TSC_hg19_v1_chr6_+_158734584	-205226	+	AB037818 AF219946 AF288480 BC152476 NM_001007466 NM_020245 AK311671	-206059	+	AB037844 NM_020823	17711	+	BC033450 TSC_hg19_v1_chr6_+_158957752	17946	+	AB590427 CR456931 DQ892606 DQ892607 DQ895846 DQ895847 EU862237 U56255 TSC_hg19_v1_chr6_-_159065772 D50663 BC105588 BC029412 AK315601 NM_006519	126018	-	AK304056|TULP4|56995|tubby like protein 4##AB037818|TULP4|56995|tubby like protein 4##AF219946|TULP4|56995|tubby like protein 4##AF288480|TULP4|56995|tubby like protein 4##BC152476|TULP4|56995|tubby like protein 4##NM_001007466|TULP4|56995|tubby like protein 4##NM_020245|TULP4|56995|tubby like protein 4##AB037844|TMEM181|57583|transmembrane protein 181##NM_020823|TMEM181|57583|transmembrane protein 181##BC033450|TMEM181|57583|transmembrane protein 181##CR456931|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892606|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892607|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895846|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895847|DYNLT1|6993|dynein, light chain, Tctex-type 1##EU862237|DYNLT1|6993|dynein, light chain, Tctex-type 1##U56255|DYNLT1|6993|dynein, light chain, Tctex-type 1##D50663|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC105588|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC029412|DYNLT1|6993|dynein, light chain, Tctex-type 1##AK315601|DYNLT1|6993|dynein, light chain, Tctex-type 1##NM_006519|DYNLT1|6993|dynein, light chain, Tctex-type 1	0.983113	CTCF.p2:9:0.983
chr9	69161998	69162145	reg1014638.p1	9.299	+	TSC_hg19_v1_chr9_+_69065493 AK311167	-96533	+	TSC_hg19_v1_chr9_+_68726468 AK311167	-435569	+	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	-1235255	+	NM_001085476	40132	-	AF265442 BC069006 AK293173 NM_001085457	100483	-	AL136793 NM_001098805	219909	+	AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4	0.011183	
chrX	115336365	115336480	reg1012803.p1	9.299	+	AK313927 NM_000686 X87723 U16957	-34427	+	BC003645 TSC_hg19_v1_chrX_-_115085443	-250983	-	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-508554	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	231345	+	TSC_hg19_v1_chrX_+_115567832 BC093710 BC093712	231415	+	BC062223 NM_001017978 AK000618 AK026566	257727	-	AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##BC003645|LOC642776|642776|uncharacterized LOC642776##NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##BC093710|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##BC093712|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##BC062223|CXorf61|203413|chromosome X open reading frame 61##NM_001017978|CXorf61|203413|chromosome X open reading frame 61##AK000618|CXorf61|203413|chromosome X open reading frame 61##AK026566|CXorf61|203413|chromosome X open reading frame 61	0.94765	CTCF.p2:-20:0.948
chr12	124538553	124538657	reg1012851.p1	9.298	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-80876	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-81406	-	NM_207437	-291564	+	AK126577 NM_181709	235104	+	TSC_hg19_v1_chr12_-_125002875 BC033087	464254	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	513470	-	AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##NM_207437|DNAH10|196385|dynein, axonemal, heavy chain 10##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2	0.014604	
chr15	25985140	25985245	reg1014067.p1	9.298	+	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	-301014	-	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	-301091	-	L07557 NM_130838	-334543	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	123161	-	AB051358 TSC_hg19_v1_chr15_-_26108932	123708	-	AK295167 NM_001191321 TSC_hg19_v1_chr15_-_26874238 BC038837	889088	-	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##AB051358|ATP10A|57194|ATPase, class V, type 10A##AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	0.280501	CTCF.p2:-12:0.281
chr17	29339898	29340009	reg1012629.p1	9.298	+	TSC_hg19_v1_chr17_+_29298062 AK226030 BC082262 AK312979 AK122646 AK122709 AB470605 AY598332	-41813	+	NM_001184992 NM_032322 NM_197939 TSC_hg19_v1_chr17_+_29298040 BC126420 BC126422 BC144143 AJ496729 BC005084	-41955	+	AK074196 AJ238994 AJ242782 NM_018404 TSC_hg19_v1_chr17_+_29248960 AK074204 AK222526 AJ272195 BC033758 DQ288859	-91121	+	TSC_hg19_v1_chr17_+_29421944 D12625 NM_000267 NM_001042492 NM_001128147	81991	+	TSC_hg19_v1_chr17_+_29421994 AK289936 M82814 M89914 BC144643 D42072	82156	+	X51694 BC018050 AK222663 AK312445 NM_002544	284361	-	AK226030|RNF135|84282|ring finger protein 135##BC082262|RNF135|84282|ring finger protein 135##AK312979|RNF135|84282|ring finger protein 135##AK122646|RNF135|84282|ring finger protein 135##AK122709|RNF135|84282|ring finger protein 135##AB470605|RNF135|84282|ring finger protein 135##AY598332|RNF135|84282|ring finger protein 135##NM_001184992|RNF135|84282|ring finger protein 135##NM_032322|RNF135|84282|ring finger protein 135##NM_197939|RNF135|84282|ring finger protein 135##BC126420|RNF135|84282|ring finger protein 135##BC126422|RNF135|84282|ring finger protein 135##BC144143|RNF135|84282|ring finger protein 135##AJ496729|RNF135|84282|ring finger protein 135##BC005084|RNF135|84282|ring finger protein 135##AK074196|ADAP2|55803|ArfGAP with dual PH domains 2##AJ238994|ADAP2|55803|ArfGAP with dual PH domains 2##AJ242782|ADAP2|55803|ArfGAP with dual PH domains 2##NM_018404|ADAP2|55803|ArfGAP with dual PH domains 2##AK074204|ADAP2|55803|ArfGAP with dual PH domains 2##AK222526|ADAP2|55803|ArfGAP with dual PH domains 2##AJ272195|ADAP2|55803|ArfGAP with dual PH domains 2##BC033758|ADAP2|55803|ArfGAP with dual PH domains 2##DQ288859|ADAP2|55803|ArfGAP with dual PH domains 2##D12625|NF1|4763|neurofibromin 1##NM_000267|NF1|4763|neurofibromin 1##NM_001042492|NF1|4763|neurofibromin 1##NM_001128147|NF1|4763|neurofibromin 1##AK289936|NF1|4763|neurofibromin 1##M82814|NF1|4763|neurofibromin 1##M89914|NF1|4763|neurofibromin 1##BC144643|NF1|4763|neurofibromin 1##D42072|NF1|4763|neurofibromin 1##X51694|OMG|4974|oligodendrocyte myelin glycoprotein##BC018050|OMG|4974|oligodendrocyte myelin glycoprotein##AK222663|OMG|4974|oligodendrocyte myelin glycoprotein##AK312445|OMG|4974|oligodendrocyte myelin glycoprotein##NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein	0.128275	
chr22	42710083	42710209	reg1013655.p1	9.298	+	AB527391 NM_005650 NM_181492	-98769	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	-183265	-	AB463001 CU013213 CU013501 M20403 X08006 BC066877 BC067432 TSC_hg19_v1_chr22_-_42526809 BC106757 BC106758 BC126858 CR456430 BC075023 BC075024	-183339	-	BC038245 TSC_hg19_v1_chr22_-_42765218	55056	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	118235	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	205621	-	NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013213|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013501|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##M20403|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##X08006|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC066877|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC067432|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106757|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106758|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC126858|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CR456430|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075023|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075024|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)	0.192662	
chr6	46594151	46594288	reg1013679.p1	9.298	+	AY034085 NM_001251973	-134463	-	TSC_hg19_v1_chr6_-_46459031 AY034086 AK090990 AX746721 NM_001251974	-135185	-	NM_005822	-300591	-	AK307986 CU679677 DQ892889 EU176719 AF237982 AK301604 BC034323 BC012548 AK292263 BC010358 NM_016593	26156	-	TSC_hg19_v1_chr6_+_46620711 NM_001204051 NM_001204052 NM_004277 AK295233 BC033091 AK302906 AK291427 AK315940 AY358711 AF110532 CU689606	26561	+	AK131455 NM_001010870 NM_001168359	61392	+	AY034085|RCAN2|10231|regulator of calcineurin 2##NM_001251973|RCAN2|10231|regulator of calcineurin 2##AY034086|RCAN2|10231|regulator of calcineurin 2##AK090990|RCAN2|10231|regulator of calcineurin 2##NM_001251974|RCAN2|10231|regulator of calcineurin 2##NM_005822|RCAN2|10231|regulator of calcineurin 2##AK307986|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##DQ892889|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##EU176719|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##AF237982|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##AK301604|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##BC034323|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##BC012548|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##AK292263|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##BC010358|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##NM_016593|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##NM_001204051|SLC25A27|9481|solute carrier family 25, member 27##NM_001204052|SLC25A27|9481|solute carrier family 25, member 27##NM_004277|SLC25A27|9481|solute carrier family 25, member 27##AK295233|SLC25A27|9481|solute carrier family 25, member 27##BC033091|SLC25A27|9481|solute carrier family 25, member 27##AK302906|SLC25A27|9481|solute carrier family 25, member 27##AK291427|SLC25A27|9481|solute carrier family 25, member 27##AK315940|SLC25A27|9481|solute carrier family 25, member 27##AY358711|SLC25A27|9481|solute carrier family 25, member 27##AF110532|SLC25A27|9481|solute carrier family 25, member 27##AK131455|TDRD6|221400|tudor domain containing 6##NM_001010870|TDRD6|221400|tudor domain containing 6##NM_001168359|TDRD6|221400|tudor domain containing 6	0.0	
chr13	46381773	46381890	reg1013040.p1	9.297	+	AK093129 AX747942 NM_152719	-105386	+	BC131494 AK057244 NM_182542	-191966	-	TSC_hg19_v1_chr13_+_46039081 NM_031431 AF349676 AF332595 AK026305 AK225466 AK225952 BX648211 AK294959 AK304248 AK314387 BC038953 CU691622	-342734	+	AK096522 AB463764 BC041372 NM_198849	43969	-	BC019000 TSC_hg19_v1_chr13_-_46626864 AK056422 AY283618 NM_015070	245052	-	TSC_hg19_v1_chr13_+_46626953 AK095119 AK124928	245140	+	AK093129|SPERT|220082|spermatid associated##NM_152719|SPERT|220082|spermatid associated##BC131494|FAM194B|220081|family with sequence similarity 194, member B##AK057244|FAM194B|220081|family with sequence similarity 194, member B##NM_182542|FAM194B|220081|family with sequence similarity 194, member B##NM_031431|COG3|83548|component of oligomeric golgi complex 3##AF349676|COG3|83548|component of oligomeric golgi complex 3##AF332595|COG3|83548|component of oligomeric golgi complex 3##AK026305|COG3|83548|component of oligomeric golgi complex 3##AK225466|COG3|83548|component of oligomeric golgi complex 3##AK225952|COG3|83548|component of oligomeric golgi complex 3##BX648211|COG3|83548|component of oligomeric golgi complex 3##AK294959|COG3|83548|component of oligomeric golgi complex 3##AK304248|COG3|83548|component of oligomeric golgi complex 3##AK314387|COG3|83548|component of oligomeric golgi complex 3##BC038953|COG3|83548|component of oligomeric golgi complex 3##BC041372|SIAH3|283514|seven in absentia homolog 3 (Drosophila)##NM_198849|SIAH3|283514|seven in absentia homolog 3 (Drosophila)##BC019000|ZC3H13|23091|zinc finger CCCH-type containing 13##AK056422|ZC3H13|23091|zinc finger CCCH-type containing 13##AY283618|ZC3H13|23091|zinc finger CCCH-type containing 13##NM_015070|ZC3H13|23091|zinc finger CCCH-type containing 13##AK095119|LOC100509894|100509894|uncharacterized LOC100509894##AK124928|LOC100509894|100509894|uncharacterized LOC100509894	0.998947	CTCF.p2:6:0.999
chr14	88655808	88655924	reg1013283.p1	9.297	+	BC029479 TSC_hg19_v1_chr14_+_88490954	-164943	+	NM_003608 TSC_hg19_v1_chr14_+_88471478 AK313797 BC035633 BC071715	-184366	+	NM_001201402	-195858	-	EU978940 EU978941 BC075022 BC075021 AF385399 NM_138318 TSC_hg19_v1_chr14_-_88737268	81350	-	AK290518 TSC_hg19_v1_chr14_-_88789574 AK313499 NM_138317	133708	-	AK315263 TSC_hg19_v1_chr14_-_88793059 EU978938	137137	-	BC029479|LOC283587|283587|uncharacterized LOC283587##NM_003608|GPR65|8477|G protein-coupled receptor 65##AK313797|GPR65|8477|G protein-coupled receptor 65##BC035633|GPR65|8477|G protein-coupled receptor 65##BC071715|GPR65|8477|G protein-coupled receptor 65##NM_001201402|GALC|2581|galactosylceramidase##EU978940|KCNK10|54207|potassium channel, subfamily K, member 10##EU978941|KCNK10|54207|potassium channel, subfamily K, member 10##BC075022|KCNK10|54207|potassium channel, subfamily K, member 10##BC075021|KCNK10|54207|potassium channel, subfamily K, member 10##AF385399|KCNK10|54207|potassium channel, subfamily K, member 10##NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10##AK290518|KCNK10|54207|potassium channel, subfamily K, member 10##AK313499|KCNK10|54207|potassium channel, subfamily K, member 10##NM_138317|KCNK10|54207|potassium channel, subfamily K, member 10##AK315263|KCNK10|54207|potassium channel, subfamily K, member 10##EU978938|KCNK10|54207|potassium channel, subfamily K, member 10	0.356608	CTCF.p2:4:0.357
chrX	131226603	131226732	reg1015166.p1	9.297	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	-69027	+	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	-69346	+	TSC_hg19_v1_chrX_-_130964633 AK097911	-262016	-	FJ717411 BC114371 AK125336 NM_194277	35293	-	EU832115 EU832161 EU832209 EU832255 TSC_hg19_v1_chrX_-_131351340 AL049685 BC003403 AK124801 BX647223 AL832461	124795	-	TSC_hg19_v1_chrX_-_131352063 BC051467 AY298955 NM_021183	125393	-	AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##FJ717411|FRMD7|90167|FERM domain containing 7##BC114371|FRMD7|90167|FERM domain containing 7##AK125336|FRMD7|90167|FERM domain containing 7##NM_194277|FRMD7|90167|FERM domain containing 7##EU832115|RAP2C|57826|RAP2C, member of RAS oncogene family##EU832161|RAP2C|57826|RAP2C, member of RAS oncogene family##EU832209|RAP2C|57826|RAP2C, member of RAS oncogene family##EU832255|RAP2C|57826|RAP2C, member of RAS oncogene family##AL049685|RAP2C|57826|RAP2C, member of RAS oncogene family##BC003403|RAP2C|57826|RAP2C, member of RAS oncogene family##AK124801|RAP2C|57826|RAP2C, member of RAS oncogene family##BX647223|RAP2C|57826|RAP2C, member of RAS oncogene family##AL832461|RAP2C|57826|RAP2C, member of RAS oncogene family##BC051467|RAP2C|57826|RAP2C, member of RAS oncogene family##AY298955|RAP2C|57826|RAP2C, member of RAS oncogene family##NM_021183|RAP2C|57826|RAP2C, member of RAS oncogene family	0.0	
chr14	65103525	65103638	reg1011399.p1	9.296	+	TSC_hg19_v1_chr14_+_65016678 AK058044 NM_172365 BC068989	-86936	+	TSC_hg19_v1_chr14_+_65007458 AK097824 BC036107 BC034365 AB527255 BT009815 CU674866 DQ892538 DQ895749	-96089	+	TSC_hg19_v1_chr14_+_65007187 NM_021979	-96347	+	TSC_hg19_v1_chr14_+_65171178 BX248779 NM_015549	67591	+	TSC_hg19_v1_chr14_+_65171243 BC129952 BC129953	67697	+	AB384944 BC136284 BC136285 NM_000347 NM_001024858	186257	-	AK058044|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##NM_172365|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##BC068989|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##AK097824|HSPA2|3306|heat shock 70kDa protein 2##BC036107|HSPA2|3306|heat shock 70kDa protein 2##BC034365|HSPA2|3306|heat shock 70kDa protein 2##BT009815|HSPA2|3306|heat shock 70kDa protein 2##DQ892538|HSPA2|3306|heat shock 70kDa protein 2##DQ895749|HSPA2|3306|heat shock 70kDa protein 2##NM_021979|HSPA2|3306|heat shock 70kDa protein 2##BX248779|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##NM_015549|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BC129952|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BC129953|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BC136284|SPTB|6710|spectrin, beta, erythrocytic##BC136285|SPTB|6710|spectrin, beta, erythrocytic##NM_000347|SPTB|6710|spectrin, beta, erythrocytic##NM_001024858|SPTB|6710|spectrin, beta, erythrocytic	0.996691	CTCF.p2:11:0.997
chr16	14991250	14991385	reg1014974.p1	9.296	+	TSC_hg19_v1_chr16_+_14927721 X57398	-63557	+	TSC_hg19_v1_chr16_+_14927651 NM_014287 BC065535	-63674	+	BC106731 BC106732 BC111804 NM_003561 U95301	-202840	-	AB528194 AF132984 NM_006985	39982	+	NM_015027 TSC_hg19_v1_chr16_+_15068894 BC045554 BC053946	77549	+	TSC_hg19_v1_chr16_+_15068931 BC033748	77622	+	X57398|NOMO1|23420|NODAL modulator 1##NM_014287|NOMO1|23420|NODAL modulator 1##BC065535|NOMO1|23420|NODAL modulator 1##BC106731|PLA2G10|8399|phospholipase A2, group X##BC106732|PLA2G10|8399|phospholipase A2, group X##BC111804|PLA2G10|8399|phospholipase A2, group X##NM_003561|PLA2G10|8399|phospholipase A2, group X##U95301|PLA2G10|8399|phospholipase A2, group X##AF132984|NPIP|9284|nuclear pore complex interacting protein##NM_006985|NPIP|9284|nuclear pore complex interacting protein##NM_015027|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC045554|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC053946|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC033748|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1	0.514946	CTCF.p2:-16:0.515
chr19	57977233	57977348	reg1013582.p1	9.296	+	NM_020633	-9184	-	TSC_hg19_v1_chr19_+_57946689 NM_001023561 AK122794	-30601	+	TSC_hg19_v1_chr19_+_57922528 NM_006959 AK127948 AK098183	-54759	+	AK294941 AK293825 AK302574 AK301562 CR749225 BC150292 BX647068 NM_001024596 NM_001144068	11624	-	NM_001098491 NM_001098492 NM_001098493 NM_001098494 NM_001098495 NM_001098496 NM_024691 TSC_hg19_v1_chr19_+_57999117 AK316297 AK309427 AK307802 AK026886 AK302135 AK316156 AK304569 BC008297 BC024259 AB209371	21915	+	TSC_hg19_v1_chr19_+_58011305 AK057209 AK160372 BC005167 NM_198542	34014	+	NM_020633|VN1R1|57191|vomeronasal 1 receptor 1##NM_001023561|ZNF749|388567|zinc finger protein 749##AK122794|ZNF749|388567|zinc finger protein 749##NM_006959|ZNF17|7565|zinc finger protein 17##AK127948|ZNF17|7565|zinc finger protein 17##AK098183|ZNF17|7565|zinc finger protein 17##AK294941|ZNF772|400720|zinc finger protein 772##AK293825|ZNF772|400720|zinc finger protein 772##AK302574|ZNF772|400720|zinc finger protein 772##AK301562|ZNF772|400720|zinc finger protein 772##CR749225|ZNF772|400720|zinc finger protein 772##BC150292|ZNF772|400720|zinc finger protein 772##BX647068|ZNF772|400720|zinc finger protein 772##NM_001024596|ZNF772|400720|zinc finger protein 772##NM_001144068|ZNF772|400720|zinc finger protein 772##NM_001098491|ZNF419|79744|zinc finger protein 419##NM_001098492|ZNF419|79744|zinc finger protein 419##NM_001098493|ZNF419|79744|zinc finger protein 419##NM_001098494|ZNF419|79744|zinc finger protein 419##NM_001098495|ZNF419|79744|zinc finger protein 419##NM_001098496|ZNF419|79744|zinc finger protein 419##NM_024691|ZNF419|79744|zinc finger protein 419##AK316297|ZNF419|79744|zinc finger protein 419##AK309427|ZNF419|79744|zinc finger protein 419##AK307802|ZNF419|79744|zinc finger protein 419##AK026886|ZNF419|79744|zinc finger protein 419##AK302135|ZNF419|79744|zinc finger protein 419##AK316156|ZNF419|79744|zinc finger protein 419##AK304569|ZNF419|79744|zinc finger protein 419##BC008297|ZNF419|79744|zinc finger protein 419##BC024259|ZNF419|79744|zinc finger protein 419##AB209371|ZNF419|79744|zinc finger protein 419##AK057209|ZNF773|374928|zinc finger protein 773##AK160372|ZNF773|374928|zinc finger protein 773##BC005167|ZNF773|374928|zinc finger protein 773##NM_198542|ZNF773|374928|zinc finger protein 773	0.459459	CTCF.p2:-4:0.459
chr2	120275159	120275276	reg1014830.p1	9.295	+	TSC_hg19_v1_chr2_+_120189433 NM_183240	-85807	+	M14200 NM_001079863 AM000001	-150020	+	FM213127 NM_001178017	-150389	+	AY462218 CU690190 AB527596 U20178 U28281 TSC_hg19_v1_chr2_-_120281970	6668	-	TSC_hg19_v1_chr2_-_120282018 AK314638 NM_002980	6802	-	TSC_hg19_v1_chr2_-_120282060 BC035757	6846	-	NM_183240|TMEM37|140738|transmembrane protein 37##M14200|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001079863|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##AM000001|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213127|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178017|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##AY462218|SCTR|6344|secretin receptor##U20178|SCTR|6344|secretin receptor##U28281|SCTR|6344|secretin receptor##AK314638|SCTR|6344|secretin receptor##NM_002980|SCTR|6344|secretin receptor##BC035757|SCTR|6344|secretin receptor	0.999742	CTCF.p2:-6:1.000
chr2	141621404	141621532	reg1013024.p1	9.295	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-2083662	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-2361978	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-2362075	+	TSC_hg19_v1_chr2_-_142888540 AK054663	1267088	-	AF176832 NM_018557	1267801	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	2013738	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.975357	CTCF.p2:35:0.975
chr2	95980950	95981050	reg1013356.p2	9.295	+	TSC_hg19_v1_chr2_+_95963054 NM_013434 AB209076 AJ131730 AK095539 AK315437 BC012850 AF120102 AB528387 AF199599 AF367022 BT020075 CU680412 DQ148485 DQ892078 DQ895271 DQ895316	-17894	+	BC113877 BC114525 AK091175 AX746828 TSC_hg19_v1_chr2_+_95940239 AK290366 AK313267 AY358377 BC025736	-40766	+	TSC_hg19_v1_chr2_+_95940195 AF245303 AF245304 NM_001165977 NM_001165978 NM_144707	-40803	+	DQ148486 NM_001034914	31767	+	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	87479	+	NM_001164464	169478	-	NM_013434|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AJ131730|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK095539|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK315437|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC012850|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF120102|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF199599|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF367022|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BT020075|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ148485|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ892078|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895271|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895316|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC113877|PROM2|150696|prominin 2##BC114525|PROM2|150696|prominin 2##AK091175|PROM2|150696|prominin 2##AK290366|PROM2|150696|prominin 2##AK313267|PROM2|150696|prominin 2##AY358377|PROM2|150696|prominin 2##BC025736|PROM2|150696|prominin 2##AF245303|PROM2|150696|prominin 2##AF245304|PROM2|150696|prominin 2##NM_001165977|PROM2|150696|prominin 2##NM_001165978|PROM2|150696|prominin 2##NM_144707|PROM2|150696|prominin 2##DQ148486|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_001034914|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_001164464|TRIM43B|653192|tripartite motif containing 43B	0.965896	CTCF.p2:1:0.966
chr10	108384725	108384865	reg1014418.p1	9.294	+	BC117417 TSC_hg19_v1_chr10_+_106401047	-1983750	+	AB028982 NM_014978	-1983937	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-2271254	+	TSC_hg19_v1_chr10_-_108459000 AK123752	74264	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	539581	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	3298414	-	BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.97511	CTCF.p2:7:0.975
chr15	64445857	64445973	reg1012484.p1	9.294	+	TSC_hg19_v1_chr15_+_64443922 AK126655 AK024014 NM_024798 BC019655 BC036532 BC014660 BC030225 AY044653	-1974	+	TSC_hg19_v1_chr15_+_64388200 AK310618 BC000357 AK222793 AB528736 AF065483 AF065484 BT006983 DQ890751 DQ893918	-57709	+	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	-57775	+	M60457 M60857 TSC_hg19_v1_chr15_-_64455171	9254	-	AB528494 CR456829 CU679145 DQ892289 DQ895488 TSC_hg19_v1_chr15_-_64455184	9270	-	TSC_hg19_v1_chr15_-_64455190 BC001125 M63573 AK311074	9282	-	AK126655|SNX22|79856|sorting nexin 22##AK024014|SNX22|79856|sorting nexin 22##NM_024798|SNX22|79856|sorting nexin 22##BC019655|SNX22|79856|sorting nexin 22##BC036532|SNX22|79856|sorting nexin 22##BC014660|SNX22|79856|sorting nexin 22##BC030225|SNX22|79856|sorting nexin 22##AY044653|SNX22|79856|sorting nexin 22##AK310618|SNX1|6642|sorting nexin 1##BC000357|SNX1|6642|sorting nexin 1##AK222793|SNX1|6642|sorting nexin 1##AF065483|SNX1|6642|sorting nexin 1##AF065484|SNX1|6642|sorting nexin 1##BT006983|SNX1|6642|sorting nexin 1##DQ890751|SNX1|6642|sorting nexin 1##DQ893918|SNX1|6642|sorting nexin 1##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1##M60457|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##M60857|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##CR456829|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##DQ892289|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##DQ895488|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##BC001125|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##M63573|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##AK311074|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)	0.99994	CTCF.p2:11:1.000
chr16	85427419	85427526	reg1013061.p1	9.294	+	BC093665 BC111944 AK126284 NM_198491	-281418	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-366102	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-382343	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	217549	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	219481	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	295070	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.997723	CTCF.p2:7:0.998
chr1	94309953	94310063	reg1013576.p1	9.294	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	-162681	-	TSC_hg19_v1_chr1_+_94057602 BC084562	-252401	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-252468	+	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	34706	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	34740	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	64954	-	U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit	0.205272	CTCF.p2:-10:0.205
chr3	69170165	69170291	reg1013714.p1	9.294	+	TSC_hg19_v1_chr3_+_69134171 NM_006407 AF070523 AF115965 AF125530 AB097051 AF161476 AK301637 AK303148 AK074612 BC005143 BC107899 BC020797 AB014765 AK223566 AK312731 AB052638 AY102608	-36101	+	TSC_hg19_v1_chr3_-_69129517 AB463332 AM392893 AM393088 CR533537 CU692738 DQ893167 DQ896465 AK314751 AK289392 AK002159 AL117566 BC022853 NM_003968 NM_198195 AK298878 AK316540	-40705	-	AB384853 L01042 BC117418 BC126123 BC143840 TSC_hg19_v1_chr3_-_69101449 AK299020 BC033771 BC008454 AK312697 AB209109 NM_007114	-68843	-	AM393202 BC121019 BC017925 AL832033 AK300096 AL832709 BC039202 NM_198271	1412	-	TSC_hg19_v1_chr3_-_69299315 AK295045	129082	-	AB023230 TSC_hg19_v1_chr3_-_69435240	265003	-	NM_006407|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF070523|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF115965|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF125530|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB097051|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF161476|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK301637|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK074612|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC005143|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC107899|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC020797|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB014765|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK223566|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK312731|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB052638|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AY102608|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3##CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3##DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3##DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3##BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3##NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3##NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3##L01042|TMF1|7110|TATA element modulatory factor 1##BC117418|TMF1|7110|TATA element modulatory factor 1##BC126123|TMF1|7110|TATA element modulatory factor 1##BC143840|TMF1|7110|TATA element modulatory factor 1##AK299020|TMF1|7110|TATA element modulatory factor 1##BC033771|TMF1|7110|TATA element modulatory factor 1##BC008454|TMF1|7110|TATA element modulatory factor 1##AK312697|TMF1|7110|TATA element modulatory factor 1##AB209109|TMF1|7110|TATA element modulatory factor 1##NM_007114|TMF1|7110|TATA element modulatory factor 1##AM393202|LMOD3|56203|leiomodin 3 (fetal)##BC121019|LMOD3|56203|leiomodin 3 (fetal)##BC017925|LMOD3|56203|leiomodin 3 (fetal)##AL832033|LMOD3|56203|leiomodin 3 (fetal)##AK300096|LMOD3|56203|leiomodin 3 (fetal)##AL832709|LMOD3|56203|leiomodin 3 (fetal)##BC039202|LMOD3|56203|leiomodin 3 (fetal)##NM_198271|LMOD3|56203|leiomodin 3 (fetal)##AK295045|FRMD4B|23150|FERM domain containing 4B##AB023230|FRMD4B|23150|FERM domain containing 4B	0.992892	CTCF.p2:-6:0.993
chr5	111940855	111940964	reg1013899.p1	9.294	+	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	-186036	-	TSC_hg19_v1_chr5_+_111496560 AB002437	-444340	+	AK298779 NM_001142474 NM_001142475	-628335	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	102302	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	132664	+	NM_001204193 NM_001204194 NM_001204196 NM_001204199 NM_003135 TSC_hg19_v1_chr5_+_112196975	256020	+	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli##NM_001204193|SRP19|6728|signal recognition particle 19kDa##NM_001204194|SRP19|6728|signal recognition particle 19kDa##NM_001204196|SRP19|6728|signal recognition particle 19kDa##NM_001204199|SRP19|6728|signal recognition particle 19kDa##NM_003135|SRP19|6728|signal recognition particle 19kDa	0.02414	
chr6	112364968	112365101	reg1013198.p3	9.294	+	TSC_hg19_v1_chr6_-_112194648 NM_002037	-170379	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	-170499	-	BC032496 NM_153048	-284726	-	BC012028 NM_003880 BC035250 NM_198239 BC105940 BC105941 AY358349 AF100781 AY358350 AB075040	10383	+	AF201334 CU689114 CU692994 DQ891503 DQ894695 BC025405 TSC_hg19_v1_chr6_-_112408705 BC031101 AK026242 NM_016262	43671	-	NM_001033564 TSC_hg19_v1_chr6_+_112408818 BC044912 AL049461	43747	+	NM_002037|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3##AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF201334|TUBE1|51175|tubulin, epsilon 1##DQ891503|TUBE1|51175|tubulin, epsilon 1##DQ894695|TUBE1|51175|tubulin, epsilon 1##BC025405|TUBE1|51175|tubulin, epsilon 1##BC031101|TUBE1|51175|tubulin, epsilon 1##AK026242|TUBE1|51175|tubulin, epsilon 1##NM_016262|TUBE1|51175|tubulin, epsilon 1##NM_001033564|C6orf225|619208|chromosome 6 open reading frame 225##BC044912|C6orf225|619208|chromosome 6 open reading frame 225##AL049461|C6orf225|619208|chromosome 6 open reading frame 225	0.825066	CTCF.p2:19:0.825
chr2	85241992	85242097	reg1013852.p1	9.293	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	-43553	+	TSC_hg19_v1_chr2_+_85198299 NM_020122	-43760	+	TSC_hg19_v1_chr2_+_85133055 M92381	-108982	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	118615	+	TSC_hg19_v1_chr2_-_85555100 CU678967 EU176441 EU176775 X94333 BC028219	313028	-	AK223063 TSC_hg19_v1_chr2_-_85555113 AK126465 AK222829 BX640733 AK312479 BC008461 AF027515 AF027516 U62390	313086	-	BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##M92381|TMSB10|9168|thymosin beta 10##BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##EU176441|TGOLN2|10618|trans-golgi network protein 2##EU176775|TGOLN2|10618|trans-golgi network protein 2##X94333|TGOLN2|10618|trans-golgi network protein 2##BC028219|TGOLN2|10618|trans-golgi network protein 2##AK223063|TGOLN2|10618|trans-golgi network protein 2##AK126465|TGOLN2|10618|trans-golgi network protein 2##AK222829|TGOLN2|10618|trans-golgi network protein 2##BX640733|TGOLN2|10618|trans-golgi network protein 2##AK312479|TGOLN2|10618|trans-golgi network protein 2##BC008461|TGOLN2|10618|trans-golgi network protein 2##AF027515|TGOLN2|10618|trans-golgi network protein 2##AF027516|TGOLN2|10618|trans-golgi network protein 2##U62390|TGOLN2|10618|trans-golgi network protein 2	0.996546	CTCF.p2:13:0.997
chr9	71650585	71650712	reg1014744.p1	9.293	+	NM_000144 NM_001161706 NM_181425	-170	+	DQ890764 DQ893927 AB463461 BC039888 NM_002732	-21625	-	TSC_hg19_v1_chr9_-_71590760 AK057188	-59890	-	TSC_hg19_v1_chr9_+_71650693 BC048097 BC023633 CU690546	39	+	NM_001170414 TSC_hg19_v1_chr9_+_71736198 AK295016	85553	+	AF083893 TSC_hg19_v1_chr9_+_71736397	85763	+	NM_000144|FXN|2395|frataxin##NM_001161706|FXN|2395|frataxin##NM_181425|FXN|2395|frataxin##DQ890764|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##DQ893927|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##BC039888|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_002732|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##BC048097|FXN|2395|frataxin##BC023633|FXN|2395|frataxin##NM_001170414|TJP2|9414|tight junction protein 2 (zona occludens 2)##AK295016|TJP2|9414|tight junction protein 2 (zona occludens 2)##AF083893|TJP2|9414|tight junction protein 2 (zona occludens 2)	0.996711	CTCF.p2:-6:0.997
chr5	76312109	76312232	reg1015648.p1	9.292	+	NM_001882 AK223457 AK307729 BC018038 AK311052 X58022 CU676144 CR541666	-63351	+	BC022320 NM_130772	-166345	+	TSC_hg19_v1_chr5_+_76114883 BC012453 AY336105 BT009856 CU676194 CU680330 DQ890966 DQ894139	-197226	+	TSC_hg19_v1_chr5_+_76326231 NM_018046 BC032844	14056	+	TSC_hg19_v1_chr5_+_76326341 BC002828 U84971 AY500994 BC073864 CU689558	14364	+	TSC_hg19_v1_chr5_+_76382539 AK311179	70354	+	NM_001882|CRHBP|1393|corticotropin releasing hormone binding protein##AK223457|CRHBP|1393|corticotropin releasing hormone binding protein##AK307729|CRHBP|1393|corticotropin releasing hormone binding protein##BC018038|CRHBP|1393|corticotropin releasing hormone binding protein##AK311052|CRHBP|1393|corticotropin releasing hormone binding protein##X58022|CRHBP|1393|corticotropin releasing hormone binding protein##CR541666|CRHBP|1393|corticotropin releasing hormone binding protein##BC022320|S100Z|170591|S100 calcium binding protein Z##NM_130772|S100Z|170591|S100 calcium binding protein Z##BC012453|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##AY336105|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BT009856|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ890966|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ894139|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##NM_018046|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##BC032844|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##BC002828|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##U84971|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##AY500994|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##BC073864|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##AK311179|LOC728723|728723|uncharacterized LOC728723	0.997286	CTCF.p2:22:0.997
chrUn_gl000246	22623	22692	reg1011967.p1	9.292	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.389511	CTCF.p2:11:0.390
chr2	121828684	121828786	reg1012107.p2	9.291	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	-273842	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-724938	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-818231	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	214038	-	TSC_hg19_v1_chr2_-_122159142 CR749627	330420	-	AK297259 TSC_hg19_v1_chr2_-_122247924	419184	-	NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1##AK297259|CLASP1|23332|cytoplasmic linker associated protein 1	0.98545	CTCF.p2:2:0.985
chr22	39323414	39323578	reg1014032.p2	9.291	+	TSC_hg19_v1_chr22_-_39268255 AK094829 NM_014292	-55192	-	TSC_hg19_v1_chr22_-_39268222 BC012111 AK293035	-55275	-	TSC_hg19_v1_chr22_-_39268213 CU680218 CU687960 DQ893667 DQ895787 BC064900	-55305	-	NM_001193289 NM_145699 U03891 BC126416 BC144146 CR456393 AB528063 CU012950 CU013238 HQ258100	30114	+	AK024854 NM_004900 U61084 CT841510 AB527109 AB528064 AB528855 CU012951 CU012954 CU013239 CU013242 CU691044 AY743217 EU527884	54935	+	TSC_hg19_v1_chr22_+_39410261 AK313272 AF165520 BC011739 NM_014508 BC021080	86755	+	AK094829|CBX6|23466|chromobox homolog 6##NM_014292|CBX6|23466|chromobox homolog 6##BC012111|CBX6|23466|chromobox homolog 6##AK293035|CBX6|23466|chromobox homolog 6##DQ893667|CBX6|23466|chromobox homolog 6##DQ895787|CBX6|23466|chromobox homolog 6##BC064900|CBX6|23466|chromobox homolog 6##NM_001193289|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##NM_145699|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##U03891|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC126416|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC144146|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CR456393|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU012950|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU013238|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##HQ258100|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##AK024854|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##NM_004900|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##U61084|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CT841510|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012951|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012954|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##CU013239|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU013242|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AY743217|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##EU527884|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AK313272|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AF165520|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC011739|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##NM_014508|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC021080|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	0.012425	
chr11	1108766	1108870	reg1010178.p1	9.290	+	TSC_hg19_v1_chr11_+_1074873 L21998 NM_002457	-33946	+	AY458429 AY312160 NM_005961 TSC_hg19_v1_chr11_-_1036715	-72132	-	TSC_hg19_v1_chr11_-_1017140 AK096772	-91611	-	TSC_hg19_v1_chr11_+_1151579 AF015521 AJ298317 AF043909	42768	+	TSC_hg19_v1_chr11_+_1213469 Z48314	104656	+	TSC_hg19_v1_chr11_+_1244295 NM_002458 AK310939	135478	+	L21998|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##NM_002457|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##AY458429|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AY312160|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##NM_005961|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AK096772|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AF015521|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AJ298317|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AF043909|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##Z48314|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##NM_002458|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##AK310939|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming	0.02815	
chr11	63639600	63639718	reg1012702.p2	9.290	+	TSC_hg19_v1_chr11_+_63606599 AK307858	-33055	+	TSC_hg19_v1_chr11_+_63606564 AK225766	-33110	+	TSC_hg19_v1_chr11_+_63606486 AB188493 NM_001039469 NM_001163296 NM_001163297 NM_004954	-33233	+	NM_017490 AK290339 TSC_hg19_v1_chr11_+_63656059 X97630 AY562188	16417	+	BC023587 NM_173587	44656	-	TSC_hg19_v1_chr11_-_63684632 AB593132	44980	-	AK307858|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK225766|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AB188493|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_001039469|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_001163296|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_001163297|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_004954|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_017490|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK290339|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##X97630|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AY562188|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##BC023587|RCOR2|283248|REST corepressor 2##NM_173587|RCOR2|283248|REST corepressor 2##AB593132|RCOR2|283248|REST corepressor 2	0.0	
chr10	74856567	74856695	reg1012246.p4	9.289	+	TSC_hg19_v1_chr10_-_74856621 M24486 M24487 AK312593 AK222960 BC034998	-26	-	AK311349 TSC_hg19_v1_chr10_-_74714574	-142059	-	AF349540 BC093996 BC111946 BC143532 AY358032 NM_032562 AF339053 AK313712 TSC_hg19_v1_chr10_-_74714543	-142120	-	TSC_hg19_v1_chr10_-_74856725 NM_000917 NM_001017962 NM_001142595 NM_001142596	139	-	NM_015901 BC031224 AK303235 TSC_hg19_v1_chr10_+_74870272 AK300980 AK309755 AK316538 BC046173 BC038833	13620	+	BC103720 TSC_hg19_v1_chr10_-_74927746	71094	-	M24486|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##M24487|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##AK312593|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##AK222960|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##BC034998|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##AK311349|PLA2G12B|84647|phospholipase A2, group XIIB##AF349540|PLA2G12B|84647|phospholipase A2, group XIIB##BC093996|PLA2G12B|84647|phospholipase A2, group XIIB##BC111946|PLA2G12B|84647|phospholipase A2, group XIIB##BC143532|PLA2G12B|84647|phospholipase A2, group XIIB##AY358032|PLA2G12B|84647|phospholipase A2, group XIIB##NM_032562|PLA2G12B|84647|phospholipase A2, group XIIB##AF339053|PLA2G12B|84647|phospholipase A2, group XIIB##AK313712|PLA2G12B|84647|phospholipase A2, group XIIB##NM_000917|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001017962|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001142595|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001142596|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_015901|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC031224|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK303235|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK300980|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK309755|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK316538|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC046173|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC038833|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC103720|ECD|11319|ecdysoneless homolog (Drosophila)	0.559238	CTCF.p2:-2:0.559
chr2	109013463	109013576	reg1012768.p1	9.289	+	BC058861 NM_006588 AK298755 AF055584 AK297851 BC125043	-19016	+	AF186252 AF186255 NM_001056 NM_176825 AF186251 AF186254 AK297086 AK313193 AK298306 U66036 AF186253 AF186256 AB008164 AF026303 BC005353	-108234	+	AB528243 NM_001008743	-149869	+	NM_181453 BC037774 TSC_hg19_v1_chr2_+_109065661	52101	+	TSC_hg19_v1_chr2_+_109065677 AF432211 AB002334 BC146789	52166	+	TSC_hg19_v1_chr2_-_109150636 BC004487 AK095987	137126	-	BC058861|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##NM_006588|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK298755|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK297851|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##BC125043|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AF186252|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186255|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001056|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_176825|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186251|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186254|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK297086|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK313193|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK298306|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##U66036|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186253|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186256|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AB008164|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF026303|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC005353|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3##NM_181453|GCC2|9648|GRIP and coiled-coil domain containing 2##BC037774|GCC2|9648|GRIP and coiled-coil domain containing 2##AF432211|GCC2|9648|GRIP and coiled-coil domain containing 2##AB002334|GCC2|9648|GRIP and coiled-coil domain containing 2##BC146789|GCC2|9648|GRIP and coiled-coil domain containing 2##BC004487|FLJ38668|644903|uncharacterized LOC644903##AK095987|FLJ38668|644903|uncharacterized LOC644903	0.53972	CTCF.p2:-12:0.540
chr14	49964592	49964713	reg1014086.p1	9.288	+	AK309211 NM_001113498	-1820496	-	BC028193 NM_182830	-2152237	-	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	-2843669	-	BC032813 BC035313 L31610 U14973 AK026649 BC015974 NM_001030001 NM_001032 AB055780 AK307833 TSC_hg19_v1_chr14_-_50053095	88441	-	NM_152329 NM_203467 TSC_hg19_v1_chr14_+_50065473 BC030142 BX648029	100808	+	TSC_hg19_v1_chr14_-_50087339 BC003145 BC000741 BC070207 AK311959 AB063609 NM_001001 BC107716	122692	-	AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC032813|RPS29|6235|ribosomal protein S29##BC035313|RPS29|6235|ribosomal protein S29##L31610|RPS29|6235|ribosomal protein S29##U14973|RPS29|6235|ribosomal protein S29##AK026649|RPS29|6235|ribosomal protein S29##BC015974|RPS29|6235|ribosomal protein S29##NM_001030001|RPS29|6235|ribosomal protein S29##NM_001032|RPS29|6235|ribosomal protein S29##AB055780|RPS29|6235|ribosomal protein S29##NM_152329|LRR1|122769|leucine rich repeat protein 1##NM_203467|LRR1|122769|leucine rich repeat protein 1##BC030142|LRR1|122769|leucine rich repeat protein 1##BX648029|LRR1|122769|leucine rich repeat protein 1##BC003145|RPL36AL|6166|ribosomal protein L36a-like##BC000741|RPL36AL|6166|ribosomal protein L36a-like##BC070207|RPL36AL|6166|ribosomal protein L36a-like##AK311959|RPL36AL|6166|ribosomal protein L36a-like##AB063609|RPL36AL|6166|ribosomal protein L36a-like##NM_001001|RPL36AL|6166|ribosomal protein L36a-like##BC107716|RPL36AL|6166|ribosomal protein L36a-like	0.211349	CTCF.p2:4:0.211
chr3	38563016	38563124	reg1013062.p1	9.288	+	TSC_hg19_v1_chr3_+_38537982 AK315814	-25090	+	BC015820 TSC_hg19_v1_chr3_+_38537851 BC065368 AK023235 AK289602	-25220	+	TSC_hg19_v1_chr3_+_38537830 AK290107 NM_001145464 NM_005107 AB020523 BC104213 BC104212 AK301067 AK308814	-25275	+	M77235 NM_000335 NM_001099404 NM_001099405 NM_198056 BC051374 NM_001160160 NM_001160161	128070	-	AF117907 NM_006514	272430	-	AF109737 AF150882 NM_014139	428981	-	AK315814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC015820|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC065368|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK023235|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK289602|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK290107|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##NM_001145464|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##NM_005107|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AB020523|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC104213|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC104212|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK301067|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK308814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##M77235|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_000335|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099404|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099405|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_198056|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##BC051374|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160160|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160161|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##AF117907|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##NM_006514|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	0.997415	CTCF.p2:4:0.997
chr9	117676551	117676696	reg1016394.p1	9.288	+	AB590753 AK291642 BC074940 BC074941 BC069435 AK313721 BC104462 BC104463 NM_005118 AF520785	-108272	-	AY434464 NM_001204344	-121814	-	NM_001199233	-232255	-	AK313619 NM_001244 NM_001252290	16251	-	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	203850	-	AB022761 NM_017418	227473	+	AK291642|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074940|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074941|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC069435|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313721|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104462|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104463|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_005118|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AF520785|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AY434464|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001204344|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001199233|LOC100505478|100505478|uncharacterized LOC100505478##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1	0.120912	
chr2	87268829	87268967	reg1015901.p1	9.287	+	BC107767 BC109248 BC070296 BC005379 NM_001032392 M93143 NM_002665 BC022294	-19940	-	CR749330 NM_001024457	-124161	+	TSC_hg19_v1_chr2_+_87140905 AK302429 NM_001078170	-127979	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	34434	-	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	486119	+	TSC_hg19_v1_chr2_+_87755060 AK312010	486162	+	BC107767|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC022294|PLGLB2|5342|plasminogen-like B2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##AK302429|RGPD2|729857|RANBP2-like and GRIP domain containing 2##NM_001078170|RGPD2|729857|RANBP2-like and GRIP domain containing 2##BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152	0.994433	CTCF.p2:-1:0.994
chr13	31810496	31810617	reg1013242.p2	9.286	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-36346	+	TSC_hg19_v1_chr13_+_31774111 NM_194318	-36453	+	AB003333 TSC_hg19_v1_chr13_-_31736042 BC037553 AB003334 D86956 BC018124 AK314576 AK293955 NM_006644 AK302294 AK303029 AK311464 AK307597	-74453	-	NM_001166058 NM_130806 AF453828 AB527208 AY899851	503157	+	TSC_hg19_v1_chr13_+_32420857 BC021729	610346	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	794885	+	AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB003333|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC037553|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AB003334|HSPH1|10808|heat shock 105kDa/110kDa protein 1##D86956|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC018124|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK314576|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK293955|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_006644|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK302294|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK303029|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK311464|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK307597|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)	0.999107	CTCF.p2:-14:0.999
chr4	74730226	74730362	reg1014395.p1	9.286	+	NM_002620 BC130653 BC130657 HQ258042	-11251	+	NM_002993 AK311981 U81234 BC013744 DQ891500 DQ894692 AB463491	-27925	+	NM_000584 Y00787 AK131067 AK311874 M17017 M26383 BC013615 AF043337 AB590232 DQ890564 DQ893727 BT007067 CR542151 Z11686	-123996	+	TSC_hg19_v1_chr4_+_74735109 NM_001511 BC011976 J03561 X12510 AB590217 DQ893591 DQ894941 BT006880	4853	+	CR407677 AB527992 BC093965 BC112093 M25897 NM_002619	117397	-	CR456805 AB464075 DQ891020 DQ894200 M54995 BC028217 AK312166 NM_002704	123568	-	NM_002620|PF4V1|5197|platelet factor 4 variant 1##BC130653|PF4V1|5197|platelet factor 4 variant 1##BC130657|PF4V1|5197|platelet factor 4 variant 1##HQ258042|PF4V1|5197|platelet factor 4 variant 1##NM_002993|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##AK311981|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##U81234|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##BC013744|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ891500|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ894692|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##NM_000584|IL8|3576|interleukin 8##Y00787|IL8|3576|interleukin 8##AK131067|IL8|3576|interleukin 8##AK311874|IL8|3576|interleukin 8##M17017|IL8|3576|interleukin 8##M26383|IL8|3576|interleukin 8##BC013615|IL8|3576|interleukin 8##DQ890564|IL8|3576|interleukin 8##DQ893727|IL8|3576|interleukin 8##BT007067|IL8|3576|interleukin 8##CR542151|IL8|3576|interleukin 8##Z11686|IL8|3576|interleukin 8##NM_001511|CXCL1|2919|chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)##BC011976|CXCL1|2919|chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)##J03561|CXCL1|2919|chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)##X12510|CXCL1|2919|chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)##DQ893591|CXCL1|2919|chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)##DQ894941|CXCL1|2919|chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)##BT006880|CXCL1|2919|chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)##CR407677|PF4|5196|platelet factor 4##BC093965|PF4|5196|platelet factor 4##BC112093|PF4|5196|platelet factor 4##M25897|PF4|5196|platelet factor 4##NM_002619|PF4|5196|platelet factor 4##CR456805|PPBP|5473|pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)##DQ891020|PPBP|5473|pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)##DQ894200|PPBP|5473|pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)##M54995|PPBP|5473|pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)##BC028217|PPBP|5473|pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)##AK312166|PPBP|5473|pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)##NM_002704|PPBP|5473|pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)	0.31035	CTCF.p2:-2:0.310
chr18	61511576	61511737	reg1013220.p1	9.285	+	NM_003784 AF027866 AK300828 BC069417 BC069442 BC069547 AK290876 BC106743 BC106744	-68977	+	NM_001040147 D88575	-91365	+	AK292775 AK296705 AK309537 AK309970 NM_080475	-141463	+	AK313159 BC012609 NM_001143818 NM_002575 Y00630 J02685 J03603 M18082	43307	+	TSC_hg19_v1_chr18_+_61575223 AK314936	63558	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	71088	+	NM_003784|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AF027866|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK300828|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069417|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069442|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069547|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK290876|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106743|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106744|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##NM_001040147|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##D88575|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK313159|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##BC012609|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_001143818|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_002575|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##Y00630|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J02685|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J03603|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##M18082|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##AK314936|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	0.780961	CTCF.p2:5:0.781
chr20	31799752	31799893	reg1016230.p1	9.285	+	AK291854 BC065726 NM_080574	-43902	+	NM_182519	-130505	+	BC113398 BC113400 HQ258440 AF549189 NM_182658	-156640	+	BC041904 NM_001042439 NM_178466 BC066354	5315	+	AF417256 AF417257 BC012549 NM_001243193 NM_016583 NM_130852 AK292778 AY359020 AB024937 AF158745 AF439448 AF172993	23990	+	NM_033197 AK290243 AF364078 AK310964 TSC_hg19_v1_chr20_+_31871019 AK313176 BC008429 AY358595	71162	+	AK291854|BPIFA2|140683|BPI fold containing family A, member 2##BC065726|BPIFA2|140683|BPI fold containing family A, member 2##NM_080574|BPIFA2|140683|BPI fold containing family A, member 2##NM_182519|BPIFB4|149954|BPI fold containing family B, member 4##BC113398|BPIFB3|359710|BPI fold containing family B, member 3##BC113400|BPIFB3|359710|BPI fold containing family B, member 3##HQ258440|BPIFB3|359710|BPI fold containing family B, member 3##AF549189|BPIFB3|359710|BPI fold containing family B, member 3##NM_182658|BPIFB3|359710|BPI fold containing family B, member 3##BC041904|BPIFA3|128861|BPI fold containing family A, member 3##NM_001042439|BPIFA3|128861|BPI fold containing family A, member 3##NM_178466|BPIFA3|128861|BPI fold containing family A, member 3##BC066354|BPIFA3|128861|BPI fold containing family A, member 3##AF417256|BPIFA1|51297|BPI fold containing family A, member 1##AF417257|BPIFA1|51297|BPI fold containing family A, member 1##BC012549|BPIFA1|51297|BPI fold containing family A, member 1##NM_001243193|BPIFA1|51297|BPI fold containing family A, member 1##NM_016583|BPIFA1|51297|BPI fold containing family A, member 1##NM_130852|BPIFA1|51297|BPI fold containing family A, member 1##AK292778|BPIFA1|51297|BPI fold containing family A, member 1##AY359020|BPIFA1|51297|BPI fold containing family A, member 1##AB024937|BPIFA1|51297|BPI fold containing family A, member 1##AF158745|BPIFA1|51297|BPI fold containing family A, member 1##AF439448|BPIFA1|51297|BPI fold containing family A, member 1##AF172993|BPIFA1|51297|BPI fold containing family A, member 1##NM_033197|BPIFB1|92747|BPI fold containing family B, member 1##AK290243|BPIFB1|92747|BPI fold containing family B, member 1##AF364078|BPIFB1|92747|BPI fold containing family B, member 1##AK310964|BPIFB1|92747|BPI fold containing family B, member 1##AK313176|BPIFB1|92747|BPI fold containing family B, member 1##BC008429|BPIFB1|92747|BPI fold containing family B, member 1##AY358595|BPIFB1|92747|BPI fold containing family B, member 1	0.993555	CTCF.p2:-1:0.994
chr20	42469255	42469381	reg1014069.p1	9.285	+	BC040049 AK058060 NM_001008901 NM_176791	-113715	-	TSC_hg19_v1_chr20_+_42295753 AK303249 AK314791 BC053555 X13293 AB528519 AK223482 DQ893522 DQ895945	-173483	+	NM_002466 TSC_hg19_v1_chr20_+_42295720 BC007585	-173597	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	74169	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	75475	+	NM_001098798	105217	+	BC040049|GTSF1L|149699|gametocyte specific factor 1-like##AK058060|GTSF1L|149699|gametocyte specific factor 1-like##NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like##NM_176791|GTSF1L|149699|gametocyte specific factor 1-like##AK303249|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK314791|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC053555|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##X13293|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK223482|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ893522|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ895945|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_002466|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC007585|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098798|TOX2|84969|TOX high mobility group box family member 2	0.553121	CTCF.p2:10:0.553
chr7	117355975	117356093	reg1013263.p2	9.285	+	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	-235996	+	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	-288489	-	BC078170 AK056742 NM_003391 X07876	-392699	-	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	157447	-	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	157509	-	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	468137	+	M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	0.981326	CTCF.p2:11:0.981
chr10	6720292	6720408	reg1015115.p1	9.284	+	TSC_hg19_v1_chr10_+_6622460 AY007155	-97870	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	-98089	-	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-475474	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	730900	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	733084	-	AK027849 TSC_hg19_v1_chr10_-_7659249	938867	-	AY007155|LOC439949|439949|uncharacterized LOC439949##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.77508	CTCF.p2:0:0.775
chr18	33876675	33876808	reg1013898.p1	9.284	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-109265	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-166853	+	NM_001242875 NM_001242876 NM_001242877 NM_001242878 NM_001242879 NM_018255 TSC_hg19_v1_chr18_+_33709861 AF403223 AK293051 AK302062	-166886	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	973	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	532022	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	532153	-	NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242875|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242876|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242877|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242878|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_001242879|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##NM_018255|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AF403223|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK293051|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK302062|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.0	
chr11	67398194	67398347	reg1013057.p2	9.283	+	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	-867	-	BC007619 TSC_hg19_v1_chr11_+_67377037	-21289	+	NM_001166102 NM_007103 TSC_hg19_v1_chr11_+_67374428 AF092131 AF053070 BC008146 AK310537 AK223061 AK293522 AK300726 BC015645 AB590249 CR456739 CU677379 CU678877 DQ893236 DQ896566 AK316122	-23869	+	BC113485 BC113487 AY229977 NM_005995	8757	-	AY032593 AY040761 AY169233 BC008689 NM_080658	19848	-	AK299956 TSC_hg19_v1_chr11_-_67442068	43773	-	AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC007619|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_001166102|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_007103|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF092131|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF053070|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC008146|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK310537|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK223061|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK293522|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK300726|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC015645|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##CR456739|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ893236|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ896566|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK316122|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC113485|TBX10|347853|T-box 10##BC113487|TBX10|347853|T-box 10##AY229977|TBX10|347853|T-box 10##NM_005995|TBX10|347853|T-box 10##AY032593|ACY3|91703|aspartoacylase (aminocyclase) 3##AY040761|ACY3|91703|aspartoacylase (aminocyclase) 3##AY169233|ACY3|91703|aspartoacylase (aminocyclase) 3##BC008689|ACY3|91703|aspartoacylase (aminocyclase) 3##NM_080658|ACY3|91703|aspartoacylase (aminocyclase) 3##AK299956|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	0.055467	
chr19	48366792	48366888	reg1012911.p1	9.283	+	NM_000554 DQ426868 BC016664 DQ426867 BC053672	-41685	+	BC137501 BC141863 BC144673 AK097640 NM_198479	-60003	-	NM_003009 TSC_hg19_v1_chr19_+_48281965 BC039597 BC032546 BC047893 BC000581 U67171 AF015283	-84914	+	CU676700 DQ891165 DQ894346 U08024 L20000 X70222 TSC_hg19_v1_chr19_-_48389554 X84816 U08025	22698	-	BC020755 TSC_hg19_v1_chr19_-_48389573 L02337 S43859 AK313415 AK289380 NM_003167	22772	-	AB590993 DQ227497 NM_001128326	128542	-	NM_000554|CRX|1406|cone-rod homeobox##DQ426868|CRX|1406|cone-rod homeobox##BC016664|CRX|1406|cone-rod homeobox##DQ426867|CRX|1406|cone-rod homeobox##BC053672|CRX|1406|cone-rod homeobox##BC137501|TPRX1|284355|tetra-peptide repeat homeobox 1##BC141863|TPRX1|284355|tetra-peptide repeat homeobox 1##BC144673|TPRX1|284355|tetra-peptide repeat homeobox 1##AK097640|TPRX1|284355|tetra-peptide repeat homeobox 1##NM_198479|TPRX1|284355|tetra-peptide repeat homeobox 1##NM_003009|SEPW1|6415|selenoprotein W, 1##BC039597|SEPW1|6415|selenoprotein W, 1##BC032546|SEPW1|6415|selenoprotein W, 1##BC047893|SEPW1|6415|selenoprotein W, 1##BC000581|SEPW1|6415|selenoprotein W, 1##U67171|SEPW1|6415|selenoprotein W, 1##AF015283|SEPW1|6415|selenoprotein W, 1##DQ891165|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ894346|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08024|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L20000|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X70222|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X84816|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08025|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##BC020755|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L02337|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##S43859|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##AK313415|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##AK289380|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##NM_003167|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ227497|BSPH1|100131137|binder of sperm protein homolog 1##NM_001128326|BSPH1|100131137|binder of sperm protein homolog 1	0.99992	CTCF.p2:14:1.000
chr4	113687732	113687841	reg1013867.p2	9.283	+	NM_015454 TSC_hg19_v1_chr4_+_113558677	-129118	+	TSC_hg19_v1_chr4_-_113558120 AK302613 AK299831 NM_018392	-129651	-	NM_016648	-129667	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	51515	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	283048	+	TSC_hg19_v1_chr4_+_114214102 AK294720	526333	+	NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7##AK302613|C4orf21|55345|chromosome 4 open reading frame 21##AK299831|C4orf21|55345|chromosome 4 open reading frame 21##NM_018392|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK294720|ANK2|287|ankyrin 2, neuronal	0.963333	CTCF.p2:-9:0.963
chr5	160971392	160971537	reg1015000.p1	9.283	+	AB018258 AK295081 AK090832 AX746642 NM_025153	-692333	-	AK025130 TSC_hg19_v1_chr5_-_160112393	-859125	-	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-1122561	+	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	3662	-	NM_000811	141193	+	AK289792 NM_000806 AK295160	302777	+	AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##AK025130|ATP10B|23120|ATPase, class V, type 10B##BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6##AK289792|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_000806|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK295160|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	0.669517	CTCF.p2:-2:0.670
chr5	16791271	16791415	reg1015870.p1	9.283	+	AK316138 TSC_hg19_v1_chr5_-_16742338	-49006	-	TSC_hg19_v1_chr5_-_16738346 AK295736	-52923	-	TSC_hg19_v1_chr5_-_16617097 BC053326 AK025808 NM_001034850	-174218	-	BC050682 BC041694 TSC_hg19_v1_chr5_-_16936357 BC108736 BC032669	144985	-	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	145042	-	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	426269	+	AK316138|MYO10|4651|myosin X##AK295736|MYO10|4651|myosin X##BC053326|FAM134B|54463|family with sequence similarity 134, member B##AK025808|FAM134B|54463|family with sequence similarity 134, member B##NM_001034850|FAM134B|54463|family with sequence similarity 134, member B##BC050682|MYO10|4651|myosin X##BC041694|MYO10|4651|myosin X##BC108736|MYO10|4651|myosin X##BC032669|MYO10|4651|myosin X##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1	0.990807	CTCF.p2:-11:0.991
chr10	44167225	44167332	reg1012943.p1	9.282	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-22972	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-23073	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-65381	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	713221	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	1239440	+	AK056518 TSC_hg19_v1_chr10_-_45455156	1287869	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.999826	CTCF.p2:-3:1.000
chr3	66124451	66124562	reg1013612.p2	9.282	+	AK092495 AX747571 NM_173471	-5222	+	BC062367 NM_001033057 NM_004742 NM_015520 TSC_hg19_v1_chr3_-_66024518	-99993	-	TSC_hg19_v1_chr3_-_64673677 BC036770 AK310571	-1450820	-	NM_001164796	146661	+	TSC_hg19_v1_chr3_+_66444897 AB075504	320453	+	AF381545 BC140907 NM_015541 AY730707	426346	-	AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##BC036770|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AK310571|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_001164796|SLC25A26|115286|solute carrier family 25, member 26##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1	0.268446	CTCF.p2:-7:0.268
chr6	13795442	13795571	reg1014858.p1	9.282	+	BC052781 TSC_hg19_v1_chr6_-_13711955	-83532	-	TSC_hg19_v1_chr6_-_13711730 AB055311 NM_005493	-83771	-	AB008515 TSC_hg19_v1_chr6_-_13711498	-84015	-	BC008234 TSC_hg19_v1_chr6_-_13814790 BC016850 NM_001031713 AK024611	19262	-	NM_001165034	129170	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	129660	+	BC052781|RANBP9|10048|RAN binding protein 9##AB055311|RANBP9|10048|RAN binding protein 9##NM_005493|RANBP9|10048|RAN binding protein 9##AB008515|RANBP9|10048|RAN binding protein 9##BC008234|CCDC90A|63933|coiled-coil domain containing 90A##BC016850|CCDC90A|63933|coiled-coil domain containing 90A##NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A##AK024611|CCDC90A|63933|coiled-coil domain containing 90A##NM_001165034|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182	0.999222	CTCF.p2:4:0.999
chr8	17581921	17582073	reg1013844.p2	9.282	+	AK294860 NM_001166393	-1944	-	AK125188 FJ472826 NM_001001931	-2268	-	AF293357 BC017740 AK314692 BC098381 BC142971 FJ472827 AK289750 NM_020749	-26796	-	AY363099 AK310871 NM_001001924 NM_001001925 FJ458441 TSC_hg19_v1_chr8_-_17658604	76498	-	TSC_hg19_v1_chr8_-_17658748 FJ458440	76744	-	BT006635 CU675515 D87342 TSC_hg19_v1_chr8_-_17743179	161123	-	AK294860|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001166393|MTUS1|57509|microtubule associated tumor suppressor 1##AK125188|MTUS1|57509|microtubule associated tumor suppressor 1##FJ472826|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001001931|MTUS1|57509|microtubule associated tumor suppressor 1##AF293357|MTUS1|57509|microtubule associated tumor suppressor 1##BC017740|MTUS1|57509|microtubule associated tumor suppressor 1##AK314692|MTUS1|57509|microtubule associated tumor suppressor 1##BC098381|MTUS1|57509|microtubule associated tumor suppressor 1##BC142971|MTUS1|57509|microtubule associated tumor suppressor 1##FJ472827|MTUS1|57509|microtubule associated tumor suppressor 1##AK289750|MTUS1|57509|microtubule associated tumor suppressor 1##NM_020749|MTUS1|57509|microtubule associated tumor suppressor 1##AY363099|MTUS1|57509|microtubule associated tumor suppressor 1##AK310871|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001001924|MTUS1|57509|microtubule associated tumor suppressor 1##NM_001001925|MTUS1|57509|microtubule associated tumor suppressor 1##FJ458441|MTUS1|57509|microtubule associated tumor suppressor 1##BT006635|FGL1|2267|fibrinogen-like 1##D87342|FGL1|2267|fibrinogen-like 1	0.948484	CTCF.p2:-19:0.948
chrX	13768463	13768589	reg1015337.p1	9.282	+	TSC_hg19_v1_chrX_+_13752969 BC052809 BC096344 BC096345 BC099658 BC099659 BC092448 GU727634	-15481	+	AK225847 BC042830 TSC_hg19_v1_chrX_+_13752900	-15626	+	TSC_hg19_v1_chrX_+_13752866 NM_003611 AK290354 AK289677 BC012324 BC030787 BC062432 Y15164 Y16355	-15692	+	AM392527 AM392754 AM392867 AM392943 AM392957 AM392968 AM392974 AM393048 AM393215 AM393570 AM393576 AM393741 AM393770 AM393783 AM393822 AB528141 DQ891541 DQ894729 EU832134 EU832227 CU690388 BC008151 TSC_hg19_v1_chrX_-_13835171	66565	-	AK299675 BC047295 TSC_hg19_v1_chrX_-_13835202	66669	-	TSC_hg19_v1_chrX_-_13835213 AK095657	66696	-	BC052809|OFD1|8481|oral-facial-digital syndrome 1##BC096344|OFD1|8481|oral-facial-digital syndrome 1##BC096345|OFD1|8481|oral-facial-digital syndrome 1##BC099658|OFD1|8481|oral-facial-digital syndrome 1##BC099659|OFD1|8481|oral-facial-digital syndrome 1##BC092448|OFD1|8481|oral-facial-digital syndrome 1##GU727634|OFD1|8481|oral-facial-digital syndrome 1##AK225847|OFD1|8481|oral-facial-digital syndrome 1##BC042830|OFD1|8481|oral-facial-digital syndrome 1##NM_003611|OFD1|8481|oral-facial-digital syndrome 1##AK290354|OFD1|8481|oral-facial-digital syndrome 1##AK289677|OFD1|8481|oral-facial-digital syndrome 1##BC012324|OFD1|8481|oral-facial-digital syndrome 1##BC030787|OFD1|8481|oral-facial-digital syndrome 1##BC062432|OFD1|8481|oral-facial-digital syndrome 1##Y15164|OFD1|8481|oral-facial-digital syndrome 1##Y16355|OFD1|8481|oral-facial-digital syndrome 1##AM392527|GPM6B|2824|glycoprotein M6B##AM392754|GPM6B|2824|glycoprotein M6B##AM392867|GPM6B|2824|glycoprotein M6B##AM392943|GPM6B|2824|glycoprotein M6B##AM392957|GPM6B|2824|glycoprotein M6B##AM392968|GPM6B|2824|glycoprotein M6B##AM392974|GPM6B|2824|glycoprotein M6B##AM393048|GPM6B|2824|glycoprotein M6B##AM393215|GPM6B|2824|glycoprotein M6B##AM393570|GPM6B|2824|glycoprotein M6B##AM393576|GPM6B|2824|glycoprotein M6B##AM393741|GPM6B|2824|glycoprotein M6B##AM393770|GPM6B|2824|glycoprotein M6B##AM393783|GPM6B|2824|glycoprotein M6B##AM393822|GPM6B|2824|glycoprotein M6B##DQ891541|GPM6B|2824|glycoprotein M6B##DQ894729|GPM6B|2824|glycoprotein M6B##EU832134|GPM6B|2824|glycoprotein M6B##EU832227|GPM6B|2824|glycoprotein M6B##BC008151|GPM6B|2824|glycoprotein M6B##AK299675|GPM6B|2824|glycoprotein M6B##BC047295|GPM6B|2824|glycoprotein M6B##AK095657|GPM6B|2824|glycoprotein M6B	0.997076	CTCF.p2:-16:0.997
chr11	26156641	26156754	reg1013902.p3	9.281	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-1638048	+	NM_001195637	-3274726	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-3305352	-	NM_031418 AK302659	197033	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	437043	-	BC049207 NM_178498	586862	-	AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	0.919081	CTCF.p2:8:0.919
chr1	36751186	36751330	reg1012469.p1	9.281	+	EU446755 TSC_hg19_v1_chr1_+_36748231	-3058	+	TSC_hg19_v1_chr1_+_36690047 BC065519 BC010997 AF117756 BC002501 BC019076 BC112330 BC112350	-61196	+	TSC_hg19_v1_chr1_+_36690029 NM_005119	-61244	+	TSC_hg19_v1_chr1_+_36771968 NM_001162530	20719	+	TSC_hg19_v1_chr1_+_36772696 NM_024676 AK297015 AK056459	21448	+	AK001509 NM_018166	38496	-	EU446755|THRAP3|9967|thyroid hormone receptor associated protein 3##BC065519|THRAP3|9967|thyroid hormone receptor associated protein 3##BC010997|THRAP3|9967|thyroid hormone receptor associated protein 3##AF117756|THRAP3|9967|thyroid hormone receptor associated protein 3##BC002501|THRAP3|9967|thyroid hormone receptor associated protein 3##BC019076|THRAP3|9967|thyroid hormone receptor associated protein 3##BC112330|THRAP3|9967|thyroid hormone receptor associated protein 3##BC112350|THRAP3|9967|thyroid hormone receptor associated protein 3##NM_005119|THRAP3|9967|thyroid hormone receptor associated protein 3##NM_001162530|SH3D21|79729|SH3 domain containing 21##NM_024676|SH3D21|79729|SH3 domain containing 21##AK297015|SH3D21|79729|SH3 domain containing 21##AK056459|SH3D21|79729|SH3 domain containing 21##AK001509|FAM176B|55194|family with sequence similarity 176, member B##NM_018166|FAM176B|55194|family with sequence similarity 176, member B	0.998968	CTCF.p2:-11:0.999
chr18	60822766	60822915	reg1012198.p2	9.280	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-26905	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-438532	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-438914	+	BC027258 NM_000633 NM_000657	163720	-	TSC_hg19_v1_chr18_-_60986977 X06487	164153	-	TSC_hg19_v1_chr18_-_60987309 M13994	164446	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.573795	CTCF.p2:-7:0.574
chr6	152086701	152086846	reg1015781.p1	9.280	+	NM_001122742 U68068 AK309580 AB588629 AB588630	-75080	+	NM_025059 BC060803 BC035003 AK225330 AK026958	-271555	+	AK298490 TSC_hg19_v1_chr6_+_151773653 AK310840 AL110241 BC011348 CU679902	-313131	+	NM_001122741 AK293019 AK313644	40050	+	NM_001122740 U68067	41680	+	X03635 AK304833 M69297 AF258449 AF258450 AF258451 NM_000125 TSC_hg19_v1_chr6_+_152128813 BC128573 BC128574 EU930361 AB587448 AB307713 AY750962 JF810888 U47678	42093	+	NM_001122742|ESR1|2099|estrogen receptor 1##U68068|ESR1|2099|estrogen receptor 1##AK309580|ESR1|2099|estrogen receptor 1##AB588629|ESR1|2099|estrogen receptor 1##AB588630|ESR1|2099|estrogen receptor 1##NM_025059|C6orf97|80129|chromosome 6 open reading frame 97##BC060803|C6orf97|80129|chromosome 6 open reading frame 97##BC035003|C6orf97|80129|chromosome 6 open reading frame 97##AK225330|C6orf97|80129|chromosome 6 open reading frame 97##AK026958|C6orf97|80129|chromosome 6 open reading frame 97##AK298490|C6orf211|79624|chromosome 6 open reading frame 211##AK310840|C6orf211|79624|chromosome 6 open reading frame 211##AL110241|C6orf211|79624|chromosome 6 open reading frame 211##BC011348|C6orf211|79624|chromosome 6 open reading frame 211##NM_001122741|ESR1|2099|estrogen receptor 1##AK293019|ESR1|2099|estrogen receptor 1##AK313644|ESR1|2099|estrogen receptor 1##NM_001122740|ESR1|2099|estrogen receptor 1##U68067|ESR1|2099|estrogen receptor 1##X03635|ESR1|2099|estrogen receptor 1##AK304833|ESR1|2099|estrogen receptor 1##M69297|ESR1|2099|estrogen receptor 1##AF258449|ESR1|2099|estrogen receptor 1##AF258450|ESR1|2099|estrogen receptor 1##AF258451|ESR1|2099|estrogen receptor 1##NM_000125|ESR1|2099|estrogen receptor 1##BC128573|ESR1|2099|estrogen receptor 1##BC128574|ESR1|2099|estrogen receptor 1##AB307713|ESR1|2099|estrogen receptor 1##AY750962|ESR1|2099|estrogen receptor 1##JF810888|ESR1|2099|estrogen receptor 1##U47678|ESR1|2099|estrogen receptor 1	0.848498	CTCF.p2:-10:0.848
chr6	163849013	163849126	reg1012243.p1	9.279	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	-12837	+	TSC_hg19_v1_chr6_+_163835795 AF272349	-13279	+	TSC_hg19_v1_chr6_+_163835675 AB067798 AB067799 AB067800 AB067801 NM_006775 NM_206853 NM_206854 NM_206855	-13397	+	AL050218 TSC_hg19_v1_chr6_+_163984651	135544	+	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	1874023	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	2226627	-	BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##AB067798|QKI|9444|QKI, KH domain containing, RNA binding##AB067799|QKI|9444|QKI, KH domain containing, RNA binding##AB067800|QKI|9444|QKI, KH domain containing, RNA binding##AB067801|QKI|9444|QKI, KH domain containing, RNA binding##NM_006775|QKI|9444|QKI, KH domain containing, RNA binding##NM_206853|QKI|9444|QKI, KH domain containing, RNA binding##NM_206854|QKI|9444|QKI, KH domain containing, RNA binding##NM_206855|QKI|9444|QKI, KH domain containing, RNA binding##AL050218|QKI|9444|QKI, KH domain containing, RNA binding##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A	0.203383	CTCF.p2:-27:0.203
chr11	43304593	43304731	reg1014004.p2	9.278	+	AB046800 NM_020929	-2988999	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-2990068	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-6684860	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	28856	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	28902	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	28978	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.998926	CTCF.p2:14:0.999
chr12	59797192	59797313	reg1013648.p1	9.278	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-482950	-	AY505340 BC126169 BC126171 BC143960 AY358288 NM_153377 TSC_hg19_v1_chr12_-_59314272	-483075	-	AK301162 AY358295 NM_001136051	-483937	-	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	192665	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	285887	+	BC050347 NM_178539	2789331	-	AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2	0.898883	CTCF.p2:-5:0.899
chr14	107147710	107147871	reg1012293.p1	9.278	+	GQ232991 EU814957 AY003867 GQ233006 AY003724 AY003757 FJ840009 GU552709 AY003791 FJ840366 JF810271 FJ840139 FJ874031 AF017464 HM774748 HM775002 HQ704029 DQ524134 DQ840815 DQ840856 AY530312 AY941926 AY986399 DQ100849 AB067106 AB363089 DQ535377 U00563 U64502 AY392909 AY393069 AY393070 AF062111 AF062168 X81739 X81750 Z14221 TSC_hg19_v1_chr14_-_107131555 AK097017 AK128476 AK130433	-16401	-	AF103081 JN110643 JN110687 GQ504895 GQ504960 HM774028 HM774358 HM774582 HM774889 X98961 AF165107 AY423163 AF485471 AF485473 AJ306675 AY423172 FN563800 EF633801 HM994977 HM994995 HM995120 HM995247 HM995290 HM995392 HM995519 HM995754 HM995991 HM996039 HM996369 AY866776 DQ322973 DQ926438 AF471404 AJ245345 AJ401162 AM279604 AY866777 DQ100932 DQ100975 DQ926053 DQ926476 GU570357 L19914 Z96976 AB067024 AB067127 AB363182 AB373619 AF231404 AF471217 AF471316 AF471319 AF471331 AF471353 AJ519231 AJ556646 AJ556650 AY640562 AY866705 AY866733 AY971141 DQ065617 DQ065721 DQ100842 DQ535272 DQ535332 DQ926279 EF633803 EF633809 EF633824 EF633825 FJ385293 FJ492933 FN563769 FN563801 FN563814 FN563817 FN563830 FN563831 L38018 Y08405 Y08406 Z96975 Z98724 AJ519258 AJ519228 AJ519314 AJ519323 AJ519243 AJ519280 AJ519310 AJ519335 AJ519268 AJ519313 X62126 TSC_hg19_v1_chr14_-_107122620	-25301	-	DQ454926 GU552751 DQ523845 DQ454743 DQ454741 FJ873884 FJ873949 FJ874082 DQ454745 AY003790 EU350425 EU667608 EF407835 DQ454756 DQ454758 DQ322814 AF343367 AF343413 AF103266 AJ007443 AF103288 FJ385341 AF103034 AF103338 AF062236 JN110970 L03820 HM774324 HM774398 HM774726 HM774904 HM774928 L33041 HM775043 AF408742 AF485449 AF078936 AF485451 AF485453 AF485455 EF633815 DQ524036 DQ524153 DQ926062 HM995709 HM995710 HM995711 HM995712 HM995713 HM995863 HM995864 HM995866 DQ322813 HM996268 AJ245306 AY044149 DQ100802 DQ100910 DQ926129 AB063797 AB063898 AB063899 AF022008 AF099199 AF398961 AF471517 AF471518 AF471519 AF471520 AJ224899 AJ399811 AY554175 AY640527 DQ065678 DQ535356 DQ779565 DQ779566 FJ385288 FN563805 FN563806 FN563810 FN563812 FN563827 FN563828 HQ689733 JF806286 X77017 L48239 AY392926 AY393064 AY452138 X65898 X81752 X81753 BC073782 AF067420 TSC_hg19_v1_chr14_-_107114275 AK097071	-33681	-	AY179836 AY179838 AY179841 AY179844 AY179846 AY179847 AY179848 AY179850 AY179854 AY179855 AY179856 AY179858 AY179860 AY003797 DQ454801 EF583677 EU099154 EU099192 AY003810 DQ454853 AY003779 DQ454620 DQ523910 GU552683 AY003802 AY003865 DQ454802 DQ454808 DQ454937 GU552691 GU552774 HM773974 FJ873961 EF441761 DQ454821 AY996332 FJ840044 FJ840053 FJ840143 FJ840193 FJ840194 FJ840196 FJ840204 FJ840239 FJ873866 FJ873869 FJ873895 FJ873936 FJ874043 GQ232929 HM116184 EF583683 EF175392 EU099153 GQ232967 GU358675 EF583681 EU099116 GU358674 JF810254 EF091907 EF175405 EU667599 EF091906 EF091908 EF091909 EF091910 EF175388 EF175390 EF175395 EF175406 EF175412 EF175417 EF175418 EF175420 EF175428 EF407848 EF441755 EU099106 EU350411 EU350412 EU433866 EU433872 EU433873 EU433879 EU667594 EU667595 EU667596 EU667597 EU667598 EU814958 EU814959 EU814960 EU814963 EU814966 FJ694873 FJ694874 GQ232838 GQ232965 GU358670 GU358676 GU358678 GU358682 JF810255 JF810274 AF103216 EF175425 EF583662 EF583663 EF583664 EF583665 EF583667 EF583673 EF583674 EF583675 EF583682 EU350410 M35478 EF407834 EF566907 EF407828 EF407830 EF583660 DQ100847 AY998726 AF209884 AJ007325 EF473862 EU099204 U86786 U86795 U86797 AF308545 AF308549 AF308553 AF308554 AF308559 AF308560 AF308561 EU090245 GQ903485 GQ903489 GQ903492 EU099120 GQ903503 AJ239384 EU099100 EU099208 Z80841 AF103052 AF103307 EU099086 EU099105 EU099142 EU099250 EU099176 EU099293 HM774304 AY515008 EU099141 EU099212 JN110763 JN110845 JN110914 JN111163 L04334 L04335 L04344 FJ385405 FJ385410 FJ385424 FJ385430 FJ385431 HM774065 HM774083 HM774091 HM774102 HM774365 HM774646 HM774653 HM774656 HM774681 HM774757 HM774769 HM774771 HM774786 HM774863 HM774965 HM775047 AF103339 AY515006 DQ523992 EU099090 EU099092 EU099115 EU099162 EU099179 EU099210 EU099218 EU099282 DQ097895 EF624069 EF624074 EF624075 EF624077 EF624128 EF624129 EF624130 EF624131 EF624138 EF624140 EF624141 EF624143 EF624174 EF624175 EF624176 EF624177 EF624179 EF624180 EF624182 EF624183 EF624184 EF624185 EF624186 EF624187 EF624188 EF624189 EF624190 EF624191 EF624192 EF624193 EU099060 EU099066 EU099128 EU099129 EU099145 EU099158 EU099160 EU099161 EU099165 EU099177 EU099178 EU099180 EU099247 EU146320 EU146330 EU146331 EU146336 EU146348 EU146349 EU146350 EU146351 EU146352 EU146353 EU146354 EU146355 EU146356 EU146357 EU146359 EU146383 EU146385 EU146386 M98324 AY393263 AY393515 DQ524120 EU090241 EU099081 EU099095 EU099099 EU099103 EU099111 EU099121 EU099135 EU099136 EU099164 EU099170 EU099174 EU099189 EU099205 EU099207 EU099209 EU099220 AF306353 AJ132852 AM259138 L12098 AF035025 AY392856 AY392858 AY393000 AY393010 AY393106 AY393123 AY393128 AY393133 AY393135 AY393137 AY393138 AY393233 AY393338 AY393342 AY393350 AY393373 AY393495 AY393496 AY393501 AY393503 AY393504 AY393508 AY393513 AY393514 AY393516 AY393517 AY393518 AY393519 AY393520 AY393522 AY393523 AY393525 AY393528 AY393532 AY393535 AY393538 AY393539 AY393540 AY393541 AY393542 AY393543 AY393544 AY393545 AY393546 AY393604 AY393611 AY393682 DQ100913 EU099069 EU099072 EU099083 EU099117 EU099138 EU099167 EU099168 EU099171 EU099175 EU099188 EU099198 EU099201 EU099202 EU099211 EU099219 EU099236 HM994945 AY574947 AY093586 AY093587 DQ100805 DQ100924 JN158773 AY093585 AF035785 AF098366 AY781822 DQ100688 DQ523989 HM995306 U00502 DQ100709 DQ100908 DQ523957 DQ524013 DQ524031 DQ524041 DQ524127 HM994992 HM994994 HM994997 HM994998 HM995013 HM995114 HM995174 HM995178 HM995180 HM995227 HM995241 HM995248 HM995283 HM995304 HM995307 HM995375 HM995447 HM995450 HM995512 HM995517 HM995520 HM995558 HM995678 HM995679 HM995680 HM995681 HM995682 HM995683 HM995684 HM995685 HM995744 HM996065 HM996269 HM996387 AF004321 AB063837 AB063906 AB063914 AB067012 AB067013 AB067018 AB067022 AB067235 AB363092 AF099200 AF174076 AY781868 AY866799 AY941859 DQ065663 DQ065677 DQ065701 DQ840709 DQ926327 EF178030 FJ195540 FJ385306 FJ385381 GQ856069 GQ903493 GQ903497 GQ903502 GQ903514 Z92894 AB027437 AB063666 AB063701 AB063715 AB063720 AB063763 AB063768 AB063778 AB063780 AB063785 AB063831 AB063902 AB063903 AB063921 AB066830 AB066835 AB066837 AB066840 AB066841 AB066842 AB066843 AB066928 AB066936 AB066939 AB066942 AB066944 AB066948 AB066949 AB066953 AB067158 AB067170 AB067305 AB067309 AB067333 AB067383 AB363078 AB363086 AB363094 AB363097 AB373608 AF021950 AF021951 AF021952 AF021970 AF021992 AF035784 AF062098 AF062127 AF062189 AF062216 AF062283 AF115114 AF115115 AF115116 AF115118 AF115119 AF174042 AF174065 AF174069 AF174073 AF174096 AF174109 AF174126 AF193848 AF217789 AF408721 AF460964 AF460965 AJ239346 AJ239357 AJ239365 AJ239372 AJ239376 AJ389170 AJ389172 AJ389179 AJ389181 AJ413995 AJ414000 AJ414001 AJ414002 AJ414004 AJ414008 AJ414009 AJ414010 AJ414015 AJ414017 AJ414020 AJ414021 AJ414023 AJ414027 AJ416562 AJ555258 AJ555262 AJ555275 AM040567 AY033246 AY055485 AY059634 AY281328 AY281329 AY466503 AY485361 AY553640 AY557623 AY557624 AY557625 AY557626 AY557627 AY561708 AY577304 AY781812 AY927666 AY941846 AY941940 D16837 DQ100681 DQ100723 DQ100733 DQ100777 DQ100808 DQ100811 DQ100820 DQ100839 DQ100902 DQ100906 DQ100912 DQ100952 DQ212523 DQ490739 DQ926531 EF555585 EF624068 EF624070 EF624071 EF624072 EF624073 EF624078 EF624079 EF624132 EF624136 EF624178 EF624181 EF624194 EF624195 EU202446 EU202448 EU835547 EU835554 FJ039781 FJ039784 FJ385379 GQ903484 GQ903486 GQ903487 GQ903490 GQ903491 GQ903495 GQ903496 GQ903498 GQ903500 GQ903501 GQ903504 GQ903507 GQ903509 GQ903511 GU570264 GU570271 GU570274 HM152493 HM152496 HM152502 HM152504 HM152527 HQ378401 HQ392874 HQ689778 HQ689781 JN158782 JN159449 JN159454 L14454 L23519 S73955 U00518 U00550 U00583 U71105 U85240 U89903 X64237 X67903 Z18841 Z34906 Z34908 Z34957 Z34959 Z34960 Z34961 Z34962 Z34963 AY927663 JN158517 DQ535261 DQ535284 DQ535416 DQ535445 DQ535451 DQ535460 EF177997 EF178006 EF178014 GU570268 Z35123 M18516 AF062105 AF062117 AF062156 AF062161 AF062175 AF062193 AF062198 AF062208 AF174026 AY172957 L06923 M62723 X65889 Z14214 Z47222 Z47224 Z47227 Z47233 Z47244 Z47245 Z47246 Z47247 Z47248 Z47249 Z47250 Z47251 Z47252 Z47253 Z47254 Z47255 Z47256 Z47257 Z47258 Z47259 Z47260 Z47261 Z47262 Z47263 Z47264 Z47265 Z47266 Z47267 Z47268 Z47269 Z47270 Z47271 Z47272 Z47273 Z80837 Z80853 CU688244 L23561 M24669 M24670 TSC_hg19_v1_chr14_-_107170387 BC062336	22445	-	M87789 L29121 BC069016 L08086 AK123800 BC025314 BC026038 AK131045 AK126133 AK130642 TSC_hg19_v1_chr14_-_107170426 AK097360 AK097364 AK128394 AK307688 BC016381 AK096985 AK097305 AK097356 AK123070 AK129512 AK129622 AK129777 AK130786 AK131065 BC070333 AK097361 AK097363 AK058027 AK129809	22625	-	FJ840101 FJ840103 FJ840105 FJ840106 FJ840110 FJ840116 FJ840119 FJ840153 FJ840184 FJ840185 FJ840188 FJ840189 FJ840190 FJ840192 FJ840197 FJ840199 FJ840203 FJ840206 FJ840207 FJ840208 FJ840209 FJ873863 FJ873875 FJ873894 FJ873921 FJ873929 FJ873938 FJ873947 FJ873950 FJ873952 FJ873965 FJ873977 FJ873996 FJ873997 FJ873999 FJ874008 FJ874014 FJ874026 FJ874040 FJ874044 FJ874061 FJ874068 FJ874078 FJ874079 FJ874080 HM116116 HM116121 HM116146 HM116172 HM116181 HM116193 HM116196 HM116197 HM116201 HM116225 GQ232804 GQ232899 AY003747 AY392896 AY393031 AY393032 AY393052 AY393293 AY393389 AY393434 AY393562 AF103042 AF459629 HM774620 HM774632 AM183987 AM279526 AY312400 EF177989 DQ926546 AJ389183 DQ100956 DQ926096 U00507 AB066845 AB066846 AB066847 AB066848 AB066849 AB066853 AB066854 AB066855 AB066856 AB066860 AB066863 AB066867 AB066872 AB066875 AB066876 AB067169 AB067183 AB067187 AB067188 AB067191 AB067197 AB067198 AB067200 AB067201 AB067203 AB067204 AB067205 AB067206 AB067207 AB067208 AB067209 AB067210 AB067211 AB067212 AB067213 AB067215 AB067216 AB067217 AB067219 AB067220 AB067227 AB067230 AF062247 AF174045 AF174063 AF174117 AF442758 AJ239338 AJ239347 AJ389184 AY781820 AY941845 DQ926224 DQ926451 FJ385297 GU570281 GU570282 HQ378332 U00575 U77371 X79160 Z80836 DQ535270 DQ535432 L28050 M34027 AF062153 AJ131058 AY190826 L21960 TSC_hg19_v1_chr14_-_107179280 AK097955	31400	-	AK097017|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130433|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073782|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF067420|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF035025|IGHV1-69|28461|immunoglobulin heavy variable 1-69##BC062336|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##M87789|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC069016|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123800|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC025314|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC026038|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126133|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK130642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097360|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097364|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128394|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016381|IGHM|3507|immunoglobulin heavy constant mu##AK096985|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097305|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097356|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123070|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129512|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129622|IGHM|3507|immunoglobulin heavy constant mu##AK129777|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK131065|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC070333|IGHV1-69|28461|immunoglobulin heavy variable 1-69##AK097361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097363|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058027|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129809|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097955|IGHA1|3493|immunoglobulin heavy constant alpha 1	3.282834	CTCF.p2:14:0.983	CTCF.p2:-44:1.000	CTCF.p2:71:0.906	CTCF.p2:-102:0.283
chr19	56165101	56165224	reg1013321.p1	9.278	+	AF054984 U79303 AK097095 TSC_hg19_v1_chr19_+_56159577 GU354321 GU354322 GU354323	-5654	+	NM_013301	-6209	+	TSC_hg19_v1_chr19_+_56155014 AF151023 AK026203 NM_016535 BC010097 AK315603 BC001219 BC071845	-10160	+	NM_001012478 NM_007279 TSC_hg19_v1_chr19_+_56165489 AK311672 BC030574	301	+	TSC_hg19_v1_chr19_+_56166394 BC008740	1236	+	TSC_hg19_v1_chr19_+_56166422 X64044 CU679069 AB527505 AB451261 AB451387	1282	+	AF054984|CCDC106|29903|coiled-coil domain containing 106##U79303|CCDC106|29903|coiled-coil domain containing 106##AK097095|CCDC106|29903|coiled-coil domain containing 106##GU354321|CCDC106|29903|coiled-coil domain containing 106##GU354322|CCDC106|29903|coiled-coil domain containing 106##GU354323|CCDC106|29903|coiled-coil domain containing 106##NM_013301|CCDC106|29903|coiled-coil domain containing 106##AF151023|ZNF581|51545|zinc finger protein 581##AK026203|ZNF581|51545|zinc finger protein 581##NM_016535|ZNF581|51545|zinc finger protein 581##BC010097|ZNF581|51545|zinc finger protein 581##AK315603|ZNF581|51545|zinc finger protein 581##BC001219|ZNF581|51545|zinc finger protein 581##BC071845|ZNF581|51545|zinc finger protein 581##NM_001012478|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##NM_007279|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##AK311672|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##BC030574|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##BC008740|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##X64044|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##AB451261|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##AB451387|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2	1.074361	CTCF.p2:20:0.998
chr5	54201909	54202032	reg1013815.p1	9.278	+	TSC_hg19_v1_chr5_+_53813761 AF395536	-388199	+	TSC_hg19_v1_chr5_+_53813656 BC117218 BC117220	-388297	+	TSC_hg19_v1_chr5_+_53813588 AK304195 NM_001145427 BC060791 BC067860 NM_001102575 NM_052870	-388425	+	AB590689 CU680150 AJ973643 X89426 BC011989 NM_001135604 NM_007036 TSC_hg19_v1_chr5_-_54281422 AK300634 AK311817	79413	-	AK312074 BC035802 NM_002104 U26174 DQ894093 EU176203 U35237	118146	+	NM_006144 BC015739 DQ893071 DQ896326 AB528402 CR456968 M18737	196521	+	AF395536|SNX18|112574|sorting nexin 18##BC117218|SNX18|112574|sorting nexin 18##BC117220|SNX18|112574|sorting nexin 18##AK304195|SNX18|112574|sorting nexin 18##NM_001145427|SNX18|112574|sorting nexin 18##BC060791|SNX18|112574|sorting nexin 18##BC067860|SNX18|112574|sorting nexin 18##NM_001102575|SNX18|112574|sorting nexin 18##NM_052870|SNX18|112574|sorting nexin 18##AJ973643|ESM1|11082|endothelial cell-specific molecule 1##X89426|ESM1|11082|endothelial cell-specific molecule 1##BC011989|ESM1|11082|endothelial cell-specific molecule 1##NM_001135604|ESM1|11082|endothelial cell-specific molecule 1##NM_007036|ESM1|11082|endothelial cell-specific molecule 1##AK300634|ESM1|11082|endothelial cell-specific molecule 1##AK311817|ESM1|11082|endothelial cell-specific molecule 1##AK312074|GZMK|3003|granzyme K (granzyme 3; tryptase II)##BC035802|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_002104|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U26174|GZMK|3003|granzyme K (granzyme 3; tryptase II)##DQ894093|GZMK|3003|granzyme K (granzyme 3; tryptase II)##EU176203|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U35237|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	0.672838	CTCF.p2:0:0.673
chr6	87566795	87566924	reg1016272.p1	9.278	+	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	-1178422	-	TSC_hg19_v1_chr6_-_86353055 AF037448 NM_001159677 NM_006372	-1213834	-	TSC_hg19_v1_chr6_-_86352716 AF155568	-1214144	-	NM_000865	80164	+	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	237959	-	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	298430	+	BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##AF037448|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159677|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_006372|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AF155568|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292	0.959007	CTCF.p2:8:0.959
chrX	49648985	49649099	reg1013719.p1	9.278	+	NM_001145073	-4573	+	NM_007003 AK312039 AF275258 AJ005894 AK092503 AX747575	-55115	+	BC004861 AF058989 NM_003785	-188461	-	TSC_hg19_v1_chrX_+_49687274 AK092049 NM_001127898 NM_001127899 AK056560	38204	+	NM_000084 AK308089 TSC_hg19_v1_chrX_+_49832243 AK290940	183203	+	NM_139289 BC033007 BC070150 TSC_hg19_v1_chrX_-_49965024	315971	-	NM_001145073|USP27X|389856|ubiquitin specific peptidase 27, X-linked##NM_007003|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK312039|PAGE4|9506|P antigen family, member 4 (prostate associated)##AF275258|PAGE4|9506|P antigen family, member 4 (prostate associated)##AJ005894|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK092503|PAGE4|9506|P antigen family, member 4 (prostate associated)##BC004861|PAGE1|8712|P antigen family, member 1 (prostate associated)##AF058989|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_003785|PAGE1|8712|P antigen family, member 1 (prostate associated)##AK092049|CLCN5|1184|chloride channel 5##NM_001127898|CLCN5|1184|chloride channel 5##NM_001127899|CLCN5|1184|chloride channel 5##AK056560|CLCN5|1184|chloride channel 5##NM_000084|CLCN5|1184|chloride channel 5##AK308089|CLCN5|1184|chloride channel 5##AK290940|CLCN5|1184|chloride channel 5##NM_139289|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC033007|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC070150|AKAP4|8852|A kinase (PRKA) anchor protein 4	0.566346	CTCF.p2:7:0.566
chr3	125304572	125304699	reg1011825.p1	9.277	+	TSC_hg19_v1_chr3_-_125239050 NM_003794	-65582	-	AF065485 TSC_hg19_v1_chr3_-_125239047 CU676320 DQ892131 DQ895325 AB528425 AK001835 AK298972 BC018762 BC021002	-65604	-	AF039019 AL833616 AF432210 AJ236885 L04282 BC035591 BC018971 AK314203 TSC_hg19_v1_chr3_-_125094153 BC050260 NM_021964	-210535	-	TSC_hg19_v1_chr3_-_125314371 NM_022776	9738	-	TSC_hg19_v1_chr3_+_125635451 BC032772 BC041080	330821	+	BC073816 NM_001015050 NM_001195223	351248	-	NM_003794|SNX4|8723|sorting nexin 4##AF065485|SNX4|8723|sorting nexin 4##DQ892131|SNX4|8723|sorting nexin 4##DQ895325|SNX4|8723|sorting nexin 4##AK001835|SNX4|8723|sorting nexin 4##AK298972|SNX4|8723|sorting nexin 4##BC018762|SNX4|8723|sorting nexin 4##AF039019|ZNF148|7707|zinc finger protein 148##AL833616|ZNF148|7707|zinc finger protein 148##AF432210|ZNF148|7707|zinc finger protein 148##AJ236885|ZNF148|7707|zinc finger protein 148##L04282|ZNF148|7707|zinc finger protein 148##BC035591|ZNF148|7707|zinc finger protein 148##BC018971|ZNF148|7707|zinc finger protein 148##AK314203|ZNF148|7707|zinc finger protein 148##BC050260|ZNF148|7707|zinc finger protein 148##NM_021964|ZNF148|7707|zinc finger protein 148##NM_022776|OSBPL11|114885|oxysterol binding protein-like 11##BC032772|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC041080|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like	0.999368	CTCF.p2:24:0.999
chr1	112199152	112199271	reg1012432.p2	9.276	+	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	-36744	+	BC041707 BC064411 NM_001081976	-92632	-	NM_000677 NM_020683	-152469	-	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	82744	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	99008	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	99224	-	NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B	0.686841	CTCF.p2:11:0.687
chr17	46755917	46756019	reg1012374.p1	9.276	+	AK056123 AB464577 AK315480 BC015565 AK056414 NM_024017 TSC_hg19_v1_chr17_-_46703952	-52180	-	AK096222 NM_024016	-63668	-	TSC_hg19_v1_chr17_-_46688363 AK223249 M16937 NM_004502	-67596	-	BC030950 AF331165 NM_032391	43912	-	BT007410 AB464574 DQ893517 DQ896496 U57052 BC007092 BC070233 AK313266 AK225234 NM_006361 AY937237	50068	-	CU689652 BC033563 NM_173623 AK310321	115677	-	AK056123|HOXB9|3219|homeobox B9##AK315480|HOXB9|3219|homeobox B9##BC015565|HOXB9|3219|homeobox B9##AK056414|HOXB9|3219|homeobox B9##NM_024017|HOXB9|3219|homeobox B9##AK096222|HOXB8|3218|homeobox B8##NM_024016|HOXB8|3218|homeobox B8##AK223249|HOXB7|3217|homeobox B7##M16937|HOXB7|3217|homeobox B7##NM_004502|HOXB7|3217|homeobox B7##BC030950|PRAC|84366|prostate cancer susceptibility candidate##AF331165|PRAC|84366|prostate cancer susceptibility candidate##NM_032391|PRAC|84366|prostate cancer susceptibility candidate##BT007410|HOXB13|10481|homeobox B13##DQ893517|HOXB13|10481|homeobox B13##DQ896496|HOXB13|10481|homeobox B13##U57052|HOXB13|10481|homeobox B13##BC007092|HOXB13|10481|homeobox B13##BC070233|HOXB13|10481|homeobox B13##AK313266|HOXB13|10481|homeobox B13##AK225234|HOXB13|10481|homeobox B13##NM_006361|HOXB13|10481|homeobox B13##AY937237|HOXB13|10481|homeobox B13##BC033563|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_173623|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK310321|TTLL6|284076|tubulin tyrosine ligase-like family, member 6	0.912864	CTCF.p2:0:0.913
chr4	68193094	68193217	reg1013603.p2	9.276	+	TSC_hg19_v1_chr4_-_66536182 AB209375	-1656958	-	AK307826 NM_004439 NM_182472	-1657503	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	-2918059	-	CU688992 TSC_hg19_v1_chr4_-_68411171	217968	-	TSC_hg19_v1_chr4_-_68411224 BC030695 BX648166 BC041117 AK307928 AK308170 M95724	218053	-	TSC_hg19_v1_chr4_-_68411282 NM_001812	218123	-	AB209375|EPHA5|2044|EPH receptor A5##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC030695|CENPC1|1060|centromere protein C 1##BX648166|CENPC1|1060|centromere protein C 1##BC041117|CENPC1|1060|centromere protein C 1##AK307928|CENPC1|1060|centromere protein C 1##AK308170|CENPC1|1060|centromere protein C 1##M95724|CENPC1|1060|centromere protein C 1##NM_001812|CENPC1|1060|centromere protein C 1	0.996875	CTCF.p2:9:0.997
chr9	89029328	89029467	reg1013545.p2	9.276	+	TSC_hg19_v1_chr9_-_88969326 AL832193 CR936608 AK055546 CR933644 AL832026 BX641077 CR933643 BC111003 NM_001185059 NM_001185074 NM_024617	-60024	-	AK308352 TSC_hg19_v1_chr9_-_88969321 BC032456	-60108	-	AB528754 AM393721 TSC_hg19_v1_chr9_-_88897454 BC053900 BC071621 AY015642 AL834356 AF284752 BC002675 AK055643 AK225937 AK309289 NM_030940	-131953	-	L13698 NM_002048	532706	-	AK127445 NM_001001709 BC132741 BC136791 HQ258059	734204	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	1083189	+	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC053900|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC071621|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AY015642|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AL834356|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AF284752|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC002675|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK055643|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK225937|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##NM_030940|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##L13698|GAS1|2619|growth arrest-specific 1##NM_002048|GAS1|2619|growth arrest-specific 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1	0.990548	CTCF.p2:-16:0.991
chr11	75434344	75434433	reg1012135.p1	9.275	+	AK026297 AK291998 AY157608 BC103876 BC103877 BC103878 NM_025098	-5490	+	AK123340 TSC_hg19_v1_chr11_-_75379695	-54714	-	AB527183 BC139780 AB058781 BC150254 NM_033063 NM_207577	-54942	-	TSC_hg19_v1_chr11_+_75479774 NM_032564 BC015234	45389	+	TSC_hg19_v1_chr11_+_75479822 AB048286 AY780646 AY358532 AL834287 AF384161 CU677247 AY780647	45535	+	NM_003369 TSC_hg19_v1_chr11_+_75526233 AK291011	91834	+	AK026297|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##AK291998|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##AY157608|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103876|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103877|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103878|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##NM_025098|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##AK123340|MAP6|4135|microtubule-associated protein 6##BC139780|MAP6|4135|microtubule-associated protein 6##AB058781|MAP6|4135|microtubule-associated protein 6##BC150254|MAP6|4135|microtubule-associated protein 6##NM_033063|MAP6|4135|microtubule-associated protein 6##NM_207577|MAP6|4135|microtubule-associated protein 6##NM_032564|DGAT2|84649|diacylglycerol O-acyltransferase 2##BC015234|DGAT2|84649|diacylglycerol O-acyltransferase 2##AB048286|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY358532|DGAT2|84649|diacylglycerol O-acyltransferase 2##AL834287|DGAT2|84649|diacylglycerol O-acyltransferase 2##AF384161|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY780647|DGAT2|84649|diacylglycerol O-acyltransferase 2##NM_003369|UVRAG|7405|UV radiation resistance associated gene##AK291011|UVRAG|7405|UV radiation resistance associated gene	1.042858	CTCF.p2:12:0.997
chr21	22536349	22536471	reg1014818.p1	9.275	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-165637	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-165720	+	TSC_hg19_v1_chr21_+_22370656 BC052946 NM_004540	-165768	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	3264658	+	TSC_hg19_v1_chr21_+_26934442 AF402776	4398062	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	4443405	-	BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##BC052946|NCAM2|4685|neural cell adhesion molecule 2##NM_004540|NCAM2|4685|neural cell adhesion molecule 2##AK124194|FLJ42200|400860|FLJ42200 protein##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39	0.99967	CTCF.p2:7:1.000
chr2	158050734	158050844	reg1012615.p1	9.275	+	TSC_hg19_v1_chr2_+_157292921 U12424 BC019874	-757835	+	TSC_hg19_v1_chr2_+_157292894 NM_000408 AK292817	-757923	+	TSC_hg19_v1_chr2_+_157292178 AB209399 U36310 AK299645	-758555	+	BC142676 BC142703 AY277591 NM_014568 AK292154 BC144211	63504	+	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	131495	-	NM_001009959 AK296477	133367	-	U12424|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC019874|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_000408|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK292817|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AB209399|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U36310|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK299645|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein	0.631976	CTCF.p2:11:0.632
chr2	53203639	53203751	reg1014540.p1	9.275	+	EF539882 AK124726 NM_001135659 NM_004801	-1944091	-	TSC_hg19_v1_chr2_-_51259258 BC046631	-1944437	-	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	-2628773	-	BC019239 BC025376 NM_001008708 BC053896 BC017941 AK097260	791261	+	AK056069 NM_001201965 BC009569 AB209795 TSC_hg19_v1_chr2_-_54014091 AK000985 AK303133 AK001283 NM_016115 NM_145863	810383	-	NM_001127397 NM_001127398 NM_015701 TSC_hg19_v1_chr2_+_54014180 AY358717 AK001913 AY453410 BC013129 BC022228 AK315477 DQ894762	810512	+	EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1##BC046631|NRXN1|9378|neurexin 1##AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##BC019239|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC025376|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##NM_001008708|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC053896|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC017941|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##AK056069|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_001201965|ASB3|51130|ankyrin repeat and SOCS box containing 3##BC009569|ASB3|51130|ankyrin repeat and SOCS box containing 3##AB209795|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK000985|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK303133|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK001283|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_016115|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_145863|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_001127397|ERLEC1|27248|endoplasmic reticulum lectin 1##NM_001127398|ERLEC1|27248|endoplasmic reticulum lectin 1##NM_015701|ERLEC1|27248|endoplasmic reticulum lectin 1##AY358717|ERLEC1|27248|endoplasmic reticulum lectin 1##AK001913|ERLEC1|27248|endoplasmic reticulum lectin 1##AY453410|ERLEC1|27248|endoplasmic reticulum lectin 1##BC013129|ERLEC1|27248|endoplasmic reticulum lectin 1##BC022228|ERLEC1|27248|endoplasmic reticulum lectin 1##AK315477|ERLEC1|27248|endoplasmic reticulum lectin 1##DQ894762|ERLEC1|27248|endoplasmic reticulum lectin 1	0.838564	CTCF.p2:0:0.839
chr10	69548350	69548474	reg1013327.p1	9.274	+	AF091606 AK313882 NM_013266	-92475	-	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	-123016	-	NM_178011 BX640611 AY358315 BC111492	-862597	+	CR457184 AF176013 BC017018 AK289537 AF176012 NM_021800 NM_201262	49440	-	TSC_hg19_v1_chr10_+_69644413 AF083106 NM_012238 AF235040	95995	+	AL136741 BC012499 TSC_hg19_v1_chr10_+_69644874	96380	+	AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##CR457184|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176013|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##BC017018|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AK289537|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176012|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_021800|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_201262|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF083106|SIRT1|23411|sirtuin 1##NM_012238|SIRT1|23411|sirtuin 1##AF235040|SIRT1|23411|sirtuin 1##AL136741|SIRT1|23411|sirtuin 1##BC012499|SIRT1|23411|sirtuin 1	1.320898	CTCF.p2:-28:0.844	CTCF.p2:-69:0.477
chr1	160055509	160055636	reg1015102.p1	9.274	+	TSC_hg19_v1_chr1_+_160051343 NM_004983 U52152 BC117516 BC117517 BC117518 BC117519	-4210	+	BC131627 BC034036 AK312383 TSC_hg19_v1_chr1_-_160040009 U52155 NM_002241	-15574	-	AB028127 TSC_hg19_v1_chr1_-_160001781 BC019865 AK074655 BC011395 NM_145167	-53818	-	AB590475 TSC_hg19_v1_chr1_-_160068277 AY157579 AF311906 AY044845	12725	-	TSC_hg19_v1_chr1_-_160068411 AF407274 AK055843 BC053881 NM_052868	12843	-	AK308115 NM_001206665 TSC_hg19_v1_chr1_-_160068754	13116	-	NM_004983|KCNJ9|3765|potassium inwardly-rectifying channel, subfamily J, member 9##U52152|KCNJ9|3765|potassium inwardly-rectifying channel, subfamily J, member 9##BC131627|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##BC034036|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##AK312383|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##U52155|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##NM_002241|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##AB028127|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC019865|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AK074655|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC011395|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##NM_145167|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AY157579|IGSF8|93185|immunoglobulin superfamily, member 8##AF311906|IGSF8|93185|immunoglobulin superfamily, member 8##AY044845|IGSF8|93185|immunoglobulin superfamily, member 8##AF407274|IGSF8|93185|immunoglobulin superfamily, member 8##AK055843|IGSF8|93185|immunoglobulin superfamily, member 8##BC053881|IGSF8|93185|immunoglobulin superfamily, member 8##NM_052868|IGSF8|93185|immunoglobulin superfamily, member 8##AK308115|IGSF8|93185|immunoglobulin superfamily, member 8##NM_001206665|IGSF8|93185|immunoglobulin superfamily, member 8	0.995467	CTCF.p2:12:0.995
chr10	79151743	79151845	reg1011411.p1	9.273	+	AF267860 NM_032024	-1609276	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1990229	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1990313	-	AF118141 TSC_hg19_v1_chr10_-_79397246	245431	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	245542	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	245612	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	1.075335	CTCF.p2:33:0.996
chr1	211123437	211123535	reg1013458.p2	9.273	+	NM_001170580 BC051191	-620845	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	-621221	+	NM_001122834 NM_001170564 AK297193	-621890	+	AF078741 AF078742 BC113709 BC143599 TSC_hg19_v1_chr1_-_211307437 AJ001366 NM_002238 NM_172362	183899	-	TSC_hg19_v1_chr1_+_211432710 NM_001136223 NM_001136224 NM_001136225	309222	+	TSC_hg19_v1_chr1_+_211432726 AK131312	309241	+	NM_001170580|HHAT|55733|hedgehog acyltransferase##BC051191|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase##NM_001122834|HHAT|55733|hedgehog acyltransferase##NM_001170564|HHAT|55733|hedgehog acyltransferase##AK297193|HHAT|55733|hedgehog acyltransferase##AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_001136223|RCOR3|55758|REST corepressor 3##NM_001136224|RCOR3|55758|REST corepressor 3##NM_001136225|RCOR3|55758|REST corepressor 3##AK131312|RCOR3|55758|REST corepressor 3	0.951433	CTCF.p2:1:0.951
chr2	202969128	202969249	reg1014051.p1	9.273	+	AB017365 NM_003507 AB010881 BC015915 CU677505	-69849	+	AB053308 AX772791 NM_139158 AK131512 BX647394 BC038807 EU831752 EU831828	-297896	+	NM_001135745 NM_020919	-323294	-	X99586 TSC_hg19_v1_chr2_-_203103288 U38784 U67122 BC053528 AK311840 BC005899 AB062294 BC066306 BC006462 U83117 U61397 NM_001005781 NM_001005782 NM_003352	134080	-	TSC_hg19_v1_chr2_+_203130458 AK300844 AK307396 AL117554 BC001707	161268	+	TSC_hg19_v1_chr2_+_203130493 BC018805 BC009306 BC032592 NM_015934 DQ890868 EU176490 AB528451 CU689436 AF123534 AF263608	161384	+	AB017365|FZD7|8324|frizzled family receptor 7##NM_003507|FZD7|8324|frizzled family receptor 7##AB010881|FZD7|8324|frizzled family receptor 7##BC015915|FZD7|8324|frizzled family receptor 7##AB053308|CDK15|65061|cyclin-dependent kinase 15##AX772791|CDK15|65061|cyclin-dependent kinase 15##NM_139158|CDK15|65061|cyclin-dependent kinase 15##AK131512|CDK15|65061|cyclin-dependent kinase 15##BX647394|CDK15|65061|cyclin-dependent kinase 15##BC038807|CDK15|65061|cyclin-dependent kinase 15##EU831752|CDK15|65061|cyclin-dependent kinase 15##EU831828|CDK15|65061|cyclin-dependent kinase 15##NM_001135745|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##NM_020919|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##X99586|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U38784|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U67122|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC053528|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK311840|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC005899|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AB062294|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC066306|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC006462|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U83117|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U61397|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005781|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005782|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_003352|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK300844|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK307396|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AL117554|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC001707|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC018805|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC009306|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC032592|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##NM_015934|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##DQ890868|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##EU176490|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AF123534|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AF263608|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)	0.643944	CTCF.p2:4:0.587
chr5	59945262	59945369	reg1012091.p2	9.273	+	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	-161275	+	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	-161411	-	NM_001104631	-755695	-	TSC_hg19_v1_chr5_-_59995928 AF490257	50601	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	50650	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	194756	-	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF490257|DEPDC1B|55789|DEP domain containing 1B##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7	0.141556	
chr6	72059179	72059289	reg1011934.p2	9.273	+	TSC_hg19_v1_chr6_+_71998514 BC110999	-60710	+	TSC_hg19_v1_chr6_+_71998513 BC018688	-60724	+	NM_024576 TSC_hg19_v1_chr6_+_71998479	-60748	+	AK023251 TSC_hg19_v1_chr6_-_72130545	71266	-	AB045726 AB051866 TSC_hg19_v1_chr6_+_72596447	537194	+	BC151853 AB002338 BC152435 NM_014989 TSC_hg19_v1_chr6_+_72596658	537419	+	BC110999|OGFRL1|79627|opioid growth factor receptor-like 1##BC018688|OGFRL1|79627|opioid growth factor receptor-like 1##NM_024576|OGFRL1|79627|opioid growth factor receptor-like 1##AK023251|LINC00472|79940|long intergenic non-protein coding RNA 472##AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC151853|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB002338|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC152435|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_014989|RIMS1|22999|regulating synaptic membrane exocytosis 1	0.510912	CTCF.p2:-5:0.511
chr9	127082723	127082822	reg1013091.p2	9.273	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	-28140	+	TSC_hg19_v1_chr9_+_127054267 NM_001166170 NM_001166171	-28513	+	TSC_hg19_v1_chr9_+_127020588 AL832574	-62182	+	TSC_hg19_v1_chr9_+_127119114 BC042968	36397	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	94948	-	AY278562 NM_001161808	130650	+	AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166170|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166171|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144	0.663255	CTCF.p2:3:0.663
chr1	12061756	12061878	reg1011212.p1	9.272	+	TSC_hg19_v1_chr1_+_12040505 BC017061	-21305	+	TSC_hg19_v1_chr1_+_12040500 AK295890	-21328	+	NM_001127660 NM_014874 AK289828 TSC_hg19_v1_chr1_+_12040394 AF036536 AK021947 D86987	-21484	+	FJ618905 NM_021933	17481	+	AK022500 TSC_hg19_v1_chr1_+_12079535	17717	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	17753	+	BC017061|MFN2|9927|mitofusin 2##AK295890|MFN2|9927|mitofusin 2##NM_001127660|MFN2|9927|mitofusin 2##NM_014874|MFN2|9927|mitofusin 2##AK289828|MFN2|9927|mitofusin 2##AF036536|MFN2|9927|mitofusin 2##AK021947|MFN2|9927|mitofusin 2##D86987|MFN2|9927|mitofusin 2##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein	0.0	
chr17	63984238	63984371	reg1011529.p1	9.272	+	BC029524 NM_001037325	-161644	-	CR933657 TSC_hg19_v1_chr17_-_63557767	-426536	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	-426625	-	BC131805 TSC_hg19_v1_chr17_-_64188195 BC037991 NM_145036 AK299075 AK096929 NM_001199165	203877	-	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	241221	-	TSC_hg19_v1_chr17_+_64298733 BC053321	314446	+	BC029524|CEP112|201134|centrosomal protein 112kDa##NM_001037325|CEP112|201134|centrosomal protein 112kDa##CR933657|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##BC131805|CEP112|201134|centrosomal protein 112kDa##BC037991|CEP112|201134|centrosomal protein 112kDa##NM_145036|CEP112|201134|centrosomal protein 112kDa##AK299075|CEP112|201134|centrosomal protein 112kDa##AK096929|CEP112|201134|centrosomal protein 112kDa##NM_001199165|CEP112|201134|centrosomal protein 112kDa##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC053321|PRKCA|5578|protein kinase C, alpha	0.927159	CTCF.p2:21:0.927
chr5	58686024	58686134	reg1012153.p1	9.271	+	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	-33336	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	-114149	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	-350701	-	U50159 NM_006203 L20970	196220	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	378269	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	378376	-	AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.996954	CTCF.p2:-5:0.997
chr12	42726234	42726366	reg1014941.p1	9.270	+	AK129910 AK303612 NM_001143787 NM_001143788 NM_001143789 NM_016488 NM_201438 NM_201439 NM_201440 NM_201515 TSC_hg19_v1_chr12_+_42719974 AY157850 AK055690 AK056622 AK299951 AY039238 AK303680 AF151066 AK308022 AK299682 BC015322 BC025306 BC039832 BC040449 AF151040 BC033753	-6322	+	AK308244 TSC_hg19_v1_chr12_-_42719921 BC005099 BC010177 BC022543 AB062361 NM_033114	-6425	-	NM_001190979 NM_001190980 NM_005748 TSC_hg19_v1_chr12_-_42632167	-94129	-	TSC_hg19_v1_chr12_-_42877418 AK122877 NM_001144881	151116	-	AK122881 TSC_hg19_v1_chr12_-_42877772	151458	-	TSC_hg19_v1_chr12_-_42877811 NM_001144882 NM_001144883	151499	-	AK129910|PPHLN1|51535|periphilin 1##AK303612|PPHLN1|51535|periphilin 1##NM_001143787|PPHLN1|51535|periphilin 1##NM_001143788|PPHLN1|51535|periphilin 1##NM_001143789|PPHLN1|51535|periphilin 1##NM_016488|PPHLN1|51535|periphilin 1##NM_201438|PPHLN1|51535|periphilin 1##NM_201439|PPHLN1|51535|periphilin 1##NM_201440|PPHLN1|51535|periphilin 1##NM_201515|PPHLN1|51535|periphilin 1##AY157850|PPHLN1|51535|periphilin 1##AK055690|PPHLN1|51535|periphilin 1##AK056622|PPHLN1|51535|periphilin 1##AK299951|PPHLN1|51535|periphilin 1##AY039238|PPHLN1|51535|periphilin 1##AK303680|PPHLN1|51535|periphilin 1##AF151066|PPHLN1|51535|periphilin 1##AK308022|PPHLN1|51535|periphilin 1##BC015322|PPHLN1|51535|periphilin 1##BC025306|PPHLN1|51535|periphilin 1##BC039832|PPHLN1|51535|periphilin 1##BC040449|PPHLN1|51535|periphilin 1##AF151040|PPHLN1|51535|periphilin 1##AK308244|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC005099|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC010177|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC022543|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##AB062361|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##NM_033114|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##NM_001190979|YAF2|10138|YY1 associated factor 2##NM_001190980|YAF2|10138|YY1 associated factor 2##NM_005748|YAF2|10138|YY1 associated factor 2##AK122877|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)	0.989794	CTCF.p2:3:0.990
chr13	69501682	69501785	reg1012891.p1	9.270	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-1697229	-	AK289924 NM_022843	-7512079	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-7512480	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	1180808	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	2938526	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	2939030	-	BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)	0.058813	
chr2	11833165	11833287	reg1013901.p1	9.270	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-22935	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-150383	+	TSC_hg19_v1_chr2_+_11682798 BC071853	-150425	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	53549	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	1024027	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	1024690	+	AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.03972	
chr2	25198443	25198567	reg1015769.p1	9.270	+	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	-3638	-	AK294726 TSC_hg19_v1_chr2_-_25194607	-3960	-	HQ258684 AK027857 BC126235 BC144119 AF033861 NM_004036 AK122926	-56548	-	TSC_hg19_v1_chr2_+_25264954 NM_014971 AB023170	66472	+	NM_000939 NM_001035256	193053	-	TSC_hg19_v1_chr2_-_25466801 BC018214	268303	-	AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AK294726|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##HQ258684|ADCY3|109|adenylate cyclase 3##AK027857|ADCY3|109|adenylate cyclase 3##BC126235|ADCY3|109|adenylate cyclase 3##BC144119|ADCY3|109|adenylate cyclase 3##AF033861|ADCY3|109|adenylate cyclase 3##NM_004036|ADCY3|109|adenylate cyclase 3##AK122926|ADCY3|109|adenylate cyclase 3##NM_014971|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AB023170|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##NM_000939|POMC|5443|proopiomelanocortin##NM_001035256|POMC|5443|proopiomelanocortin##BC018214|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.593029	CTCF.p2:2:0.593
chr7	128067504	128067614	reg1010960.p1	9.270	+	TSC_hg19_v1_chr7_-_128050037 AK092452 BC033622 AK054667 AK122994 NM_000883 NM_001102605 NM_001142576 NM_183243	-17522	-	AK131294 TSC_hg19_v1_chr7_-_128049984 CR933672	-17579	-	AK054640 AK293413 AK297943 TSC_hg19_v1_chr7_-_128046013 NM_001142573 NM_001142574 NM_001142575	-21542	-	TSC_hg19_v1_chr7_+_128095931 NM_001098786 NM_013332 AF144755 AK024729 AK222583 BC008573 BC001863 BC093742 BC112183	28407	+	NM_018396 TSC_hg19_v1_chr7_+_128116813 AK302775 BC107586 AK002212 BC064929 BC121115 BC121116 AK299960	49278	+	BC066973 NM_001012454 NM_001128926 BC105729 BC105730 BC105731 BC047310	244787	+	AK092452|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC033622|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054667|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK122994|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_000883|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001102605|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142576|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_183243|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK131294|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##CR933672|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated##AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_018396|METTL2B|55798|methyltransferase like 2B##AK302775|METTL2B|55798|methyltransferase like 2B##BC107586|METTL2B|55798|methyltransferase like 2B##AK002212|METTL2B|55798|methyltransferase like 2B##BC064929|METTL2B|55798|methyltransferase like 2B##BC121115|METTL2B|55798|methyltransferase like 2B##BC121116|METTL2B|55798|methyltransferase like 2B##AK299960|METTL2B|55798|methyltransferase like 2B##BC066973|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001012454|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001128926|FAM71F2|346653|family with sequence similarity 71, member F2##BC105729|FAM71F2|346653|family with sequence similarity 71, member F2##BC105730|FAM71F2|346653|family with sequence similarity 71, member F2##BC105731|FAM71F2|346653|family with sequence similarity 71, member F2##BC047310|FAM71F2|346653|family with sequence similarity 71, member F2	0.825414	CTCF.p2:-26:0.825
chr8	146252240	146252339	reg1012717.p1	9.270	+	BC065734 TSC_hg19_v1_chr8_-_146228282 AK296398	-24017	-	TSC_hg19_v1_chr8_-_146228237 AK021796 AK294723	-24059	-	AK128723 TSC_hg19_v1_chr8_-_146202735	-49557	-	TSC_hg19_v1_chr8_+_146277823 NM_023080 AK024642	25518	+	TSC_hg19_v1_chr8_+_146277852 BX648996 BC010001 CR457330	25611	+	None	None	None	BC065734|ZNF252|286101|zinc finger protein 252##AK296398|ZNF252|286101|zinc finger protein 252##AK294723|ZNF252|286101|zinc finger protein 252##AK128723|ZNF252|286101|zinc finger protein 252##NM_023080|C8orf33|65265|chromosome 8 open reading frame 33##AK024642|C8orf33|65265|chromosome 8 open reading frame 33##BX648996|C8orf33|65265|chromosome 8 open reading frame 33##BC010001|C8orf33|65265|chromosome 8 open reading frame 33##CR457330|C8orf33|65265|chromosome 8 open reading frame 33	0.294533	CTCF.p2:-9:0.295
chr12	65517366	65517519	reg1013725.p1	9.269	+	TSC_hg19_v1_chr12_-_65515349 NM_007191	-2092	-	AK301818 TSC_hg19_v1_chr12_-_65515286	-2161	-	TSC_hg19_v1_chr12_-_65515107 AF122922 BC018037 AY358344	-2357	-	TSC_hg19_v1_chr12_+_65563362 AK312473 NM_001167614 NM_014319 AK304317 AF112299	45912	+	NM_001031679 NM_001193460 NM_198080 TSC_hg19_v1_chr12_+_65672483 AK316365 AK293084 AK299065 AY358229 BX648776 AL833622 BC040053	155083	+	TSC_hg19_v1_chr12_+_65672705 NM_001193461	155282	+	NM_007191|WIF1|11197|WNT inhibitory factor 1##AK301818|WIF1|11197|WNT inhibitory factor 1##AF122922|WIF1|11197|WNT inhibitory factor 1##BC018037|WIF1|11197|WNT inhibitory factor 1##AY358344|WIF1|11197|WNT inhibitory factor 1##AK312473|LEMD3|23592|LEM domain containing 3##NM_001167614|LEMD3|23592|LEM domain containing 3##NM_014319|LEMD3|23592|LEM domain containing 3##AK304317|LEMD3|23592|LEM domain containing 3##AF112299|LEMD3|23592|LEM domain containing 3##NM_001031679|MSRB3|253827|methionine sulfoxide reductase B3##NM_001193460|MSRB3|253827|methionine sulfoxide reductase B3##NM_198080|MSRB3|253827|methionine sulfoxide reductase B3##AK316365|MSRB3|253827|methionine sulfoxide reductase B3##AK293084|MSRB3|253827|methionine sulfoxide reductase B3##AK299065|MSRB3|253827|methionine sulfoxide reductase B3##AY358229|MSRB3|253827|methionine sulfoxide reductase B3##BX648776|MSRB3|253827|methionine sulfoxide reductase B3##AL833622|MSRB3|253827|methionine sulfoxide reductase B3##BC040053|MSRB3|253827|methionine sulfoxide reductase B3##NM_001193461|MSRB3|253827|methionine sulfoxide reductase B3	0.350897	CTCF.p2:-8:0.351
chr22	22711778	22711892	reg1013060.p1	9.269	+	L22589 TSC_hg19_v1_chr22_+_22697538 BC022822	-14293	+	TSC_hg19_v1_chr22_+_22676817 X64134 BC072392 X01147 X14583 AF026921 M99594 X52109 Z34915 M23164 M25909 X57806 HM996126 HM996151 HM996396 AY686894 FJ385568 HM996502 AJ430768 AJ430769 S77011 AB063974 AB063975 AB063986 AB063989 AB064002 AB064006 AB064009 AB064015 AB064025 AB064029 AB064033 AB064034 AB064035 AB114462 AB363340 AB363378 AB363388 AB363391 AB363396 AB363397 AF107243 AF107248 AF115349 AF115350 AF115351 AF124169 AF212992 AF462682 AJ238329 AJ238331 AJ298040 AJ399840 AJ399841 AJ399842 AJ399844 AJ399846 AJ399850 AJ399851 AJ399853 AJ399854 AJ399858 AJ399859 AJ399860 AJ399861 AJ399864 AJ399865 AM181147 AY043113 AY043142 AY515013 AY626661 AY626662 AY942003 AY942034 AY942047 AY942062 AY942072 AY942089 AY942103 AY942110 AY942122 AY942123 DQ098732 DQ098756 DQ109965 DQ109969 DQ187592 DQ187611 DQ187713 DQ187716 DQ187726 DQ322770 DQ322811 DQ322812 DQ322941 DQ322976 DQ322977 DQ490727 DQ840921 DQ840926 DQ840927 DQ840929 DQ840934 DQ840936 DQ840964 DQ840965 DQ840966 DQ840967 DQ840968 DQ840974 DQ841004 DQ841007 DQ841066 DQ841091 DQ841096 EF589418 EF589522 EF589535 EF589539 EF589563 EF589567 EU599335 FJ385464 JF740070 JF806463 JF806464 JF806465 JF806466 JF806467 L14452 L25298 L33985 L43120 M28078 U36536 U36537 U36538 U36539 U36540 U36541 U38335 U38336 U38337 U38338 U38339 U38340 U38341 U38342 U38343 U38344 U38345 U38346 U38347 X61641 X77018 X77473 Y09391 Z35495 Z46618 Z74662 Z74673 Z74675 Z74676 Z74677 Z74678 Z74679 Z74680 Z74691 DQ098729 DQ098733 DQ098760 AY050701 AJ399862 AJ633627 AY950790 U09886 U09906 AY062363 DQ322978 AF044479 AF044480 AF165108 AF165110 AJ233720 AJ241352 AJ241358 AJ241364 AJ241370 AJ241372 AJ241373 AJ241374 AM259149 AY960869 X79782 AJ233725 AJ233731 AM259147 L19909 L38567 U27188 U27190 AF103609 AF103652 S79247 AF103678 AF103599 AF103672 AF103707 Y17942 AF103603 AF103607 AF103688 AF103627 AF103666 AY134496 AY145444 AF103699 DQ187717 AY998676	-34875	+	TSC_hg19_v1_chr22_+_22652513 BC033148 AK090629 AX746545 BX641141	-59316	+	TSC_hg19_v1_chr22_+_22712096 BC030984 BC075843 X54438 DQ892642 DQ895879 M28137 X57822 X54446 L26896 AM184067 HM996235 HM996274 HM996539 AY686916 AJ430770 AJ430772 AB063980 AB063981 AB063982 AB064003 AB064007 AB064014 AB064038 AB064039 AB064040 AF233252 AF396471 AF396473 AF396475 AF396477 AF396479 AF533987 AJ001170 AJ278777 AY043091 AY193809 AY193811 AY193813 AY193815 AY193817 AY193819 AY530326 AY685379 AY685380 AY942030 DQ098730 DQ098789 DQ187504 DQ187523 DQ187610 DQ187635 DQ205148 DQ322743 DQ322815 DQ322903 DQ840922 DQ840928 DQ841053 DQ841056 DQ841057 DQ841071 DQ841072 DQ841093 EF589384 EF589428 EF589436 EF589440 EF589458 EF589479 EF589531 HQ890344 HQ890346 HQ890348 HQ890352 JF740069 JF806462 U96394 Z74670 AY847517 AF001790 AY099260 AY950796 AY950798 AY957533 DQ098791 AF044477 AF044478 AJ408273 AJ408278 AY686929 X98752 AY206991 DQ098790 EF638806 AJ241360 AF103691 AF103721 EF710815 EF710816 EF710817 EF710818 EF710819 EF710820 EF710821 EF710822 AF103654 AF103631 AF103670 Z46312 AF103604 Z46625 AY577301 AF103619	405	+	TSC_hg19_v1_chr22_+_22723981 CR936629 U43772 L19893 AB363342 AB363367 AB363377 AB363400 AF442764 AM181374 AY942049 M80915 M80917 M80918 M80919 AM184008 AM184047 AM184048 AF047267 AF047268 AF047269	12242	+	X57809 TSC_hg19_v1_chr22_+_22735201 AK125585 BC093098	23332	+	BC033148|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##AK090629|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##BX641141|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##BC030984|IGLV1-44|28823|immunoglobulin lambda variable 1-44##DQ892642|IGL@|3535|immunoglobulin lambda locus##DQ895879|IGL@|3535|immunoglobulin lambda locus##U96394|IGLV1-44|28823|immunoglobulin lambda variable 1-44##BC093098|CYAT1|100290481|immunoglobulin lambda light chain-like	0.962667	CTCF.p2:-19:0.963
chr16	85364535	85364632	reg1013141.p1	9.268	+	BC093665 BC111944 AK126284 NM_198491	-218529	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-303213	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-319454	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	280438	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	282370	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	357959	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.032768	
chr6	160141788	160141899	reg1012299.p2	9.268	+	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	-27481	-	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	-27593	-	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	-551413	+	TSC_hg19_v1_chr6_+_160148149 AK290854 AF374416 NM_004906 NM_152858 BC000383 BC004432 BC069192	6329	+	BC028180 TSC_hg19_v1_chr6_+_160148499	6655	+	TSC_hg19_v1_chr6_+_160148611 D14661 NM_152857	6770	+	NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##AK290854|WTAP|9589|Wilms tumor 1 associated protein##AF374416|WTAP|9589|Wilms tumor 1 associated protein##NM_004906|WTAP|9589|Wilms tumor 1 associated protein##NM_152858|WTAP|9589|Wilms tumor 1 associated protein##BC000383|WTAP|9589|Wilms tumor 1 associated protein##BC004432|WTAP|9589|Wilms tumor 1 associated protein##BC069192|WTAP|9589|Wilms tumor 1 associated protein##BC028180|WTAP|9589|Wilms tumor 1 associated protein##D14661|WTAP|9589|Wilms tumor 1 associated protein##NM_152857|WTAP|9589|Wilms tumor 1 associated protein	0.995456	CTCF.p2:2:0.995
chr10	117559081	117559211	reg1013894.p2	9.266	+	TSC_hg19_v1_chr10_+_116853123 BC029592 BC035157 NM_207303 BC139916 BC139923 BC047716	-705998	+	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	-861183	+	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	-977597	+	AB590245 DQ892210 DQ895406 AF042080 U95847 U97144 BC014962 NM_145793	472534	-	AK292886 NM_001145453	473610	-	AF038421 NM_005264 TSC_hg19_v1_chr10_-_118033147	473922	-	BC029592|ATRNL1|26033|attractin-like 1##BC035157|ATRNL1|26033|attractin-like 1##NM_207303|ATRNL1|26033|attractin-like 1##BC139916|ATRNL1|26033|attractin-like 1##BC139923|ATRNL1|26033|attractin-like 1##BC047716|ATRNL1|26033|attractin-like 1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##DQ892210|GFRA1|2674|GDNF family receptor alpha 1##DQ895406|GFRA1|2674|GDNF family receptor alpha 1##AF042080|GFRA1|2674|GDNF family receptor alpha 1##U95847|GFRA1|2674|GDNF family receptor alpha 1##U97144|GFRA1|2674|GDNF family receptor alpha 1##BC014962|GFRA1|2674|GDNF family receptor alpha 1##NM_145793|GFRA1|2674|GDNF family receptor alpha 1##AK292886|GFRA1|2674|GDNF family receptor alpha 1##NM_001145453|GFRA1|2674|GDNF family receptor alpha 1##AF038421|GFRA1|2674|GDNF family receptor alpha 1##NM_005264|GFRA1|2674|GDNF family receptor alpha 1	0.989196	CTCF.p2:-3:0.989
chr10	14579063	14579190	reg1011821.p1	9.266	+	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	-206276	-	TSC_hg19_v1_chr10_-_14050453 AK001072	-528634	-	TSC_hg19_v1_chr10_-_13749648 AK057828	-829437	-	TSC_hg19_v1_chr10_-_14646259 BC064407	67191	-	TSC_hg19_v1_chr10_-_14646423 BC072452	67303	-	AK127413 NM_031453	237769	-	AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##AK001072|FRMD4A|55691|FERM domain containing 4A##AK057828|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B##AK127413|FAM107B|83641|family with sequence similarity 107, member B##NM_031453|FAM107B|83641|family with sequence similarity 107, member B	0.855325	CTCF.p2:-26:0.855
chr22	37269786	37269966	reg1012206.p1	9.266	+	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	-12768	+	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	-54357	-	AL022729 TSC_hg19_v1_chr22_-_37172162 AK307105 AK307382 BC000566 AB209424 NM_001177701 NM_006860	-97721	-	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	39782	+	BC042635 CR456416 NM_001163857 NM_178552	133981	-	D87292 TSC_hg19_v1_chr22_-_37415489 AK091874 BC010148 AK000862 AK223521 AK301300 NM_003312	145605	-	BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##AL022729|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307105|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307382|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC000566|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AB209424|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177701|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_006860|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##BC042635|C22orf33|339669|chromosome 22 open reading frame 33##CR456416|C22orf33|339669|chromosome 22 open reading frame 33##NM_001163857|C22orf33|339669|chromosome 22 open reading frame 33##NM_178552|C22orf33|339669|chromosome 22 open reading frame 33##D87292|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK091874|TST|7263|thiosulfate sulfurtransferase (rhodanese)##BC010148|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK000862|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK223521|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK301300|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_003312|TST|7263|thiosulfate sulfurtransferase (rhodanese)	0.858481	CTCF.p2:-45:0.858
chr3	187457841	187457970	reg1016952.p1	9.266	+	S67779 NM_001130845	-3640	-	EU139066 NM_001134738	-5224	-	BC068081 NM_001004312	-37561	-	BC142705 BC150184 Z21943 AK304325 AK308162 TSC_hg19_v1_chr3_-_187463257 BC146796	5339	-	U00115 NM_001706	5588	-	AL833171 TSC_hg19_v1_chr3_+_187870843	412922	+	S67779|BCL6|604|B-cell CLL/lymphoma 6##NM_001130845|BCL6|604|B-cell CLL/lymphoma 6##EU139066|BCL6|604|B-cell CLL/lymphoma 6##NM_001134738|BCL6|604|B-cell CLL/lymphoma 6##BC068081|RTP2|344892|receptor (chemosensory) transporter protein 2##NM_001004312|RTP2|344892|receptor (chemosensory) transporter protein 2##BC142705|BCL6|604|B-cell CLL/lymphoma 6##BC150184|BCL6|604|B-cell CLL/lymphoma 6##Z21943|BCL6|604|B-cell CLL/lymphoma 6##AK304325|BCL6|604|B-cell CLL/lymphoma 6##AK308162|BCL6|604|B-cell CLL/lymphoma 6##BC146796|BCL6|604|B-cell CLL/lymphoma 6##U00115|BCL6|604|B-cell CLL/lymphoma 6##NM_001706|BCL6|604|B-cell CLL/lymphoma 6##AL833171|LPP|4026|LIM domain containing preferred translocation partner in lipoma	0.688732	CTCF.p2:-6:0.647
chr3	197228900	197229063	reg1014701.p1	9.266	+	BC140841 BC144651 TSC_hg19_v1_chr3_-_197025506 AK304280 NM_001098424 NM_001204386 NM_004087 U13896 U13897 AK310596	-203507	-	TSC_hg19_v1_chr3_-_197024987 BC015560 BC028486 AK310893	-204048	-	AK294855 NM_001204387 NM_001204388	-317980	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	53861	-	NM_203315 TSC_hg19_v1_chr3_-_197300209	71220	-	TSC_hg19_v1_chr3_-_197354756 BC067856 AK309924 BC094848 AK299863 BC080518 AK311713	125772	-	BC140841|DLG1|1739|discs, large homolog 1 (Drosophila)##BC144651|DLG1|1739|discs, large homolog 1 (Drosophila)##AK304280|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001098424|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204386|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_004087|DLG1|1739|discs, large homolog 1 (Drosophila)##U13896|DLG1|1739|discs, large homolog 1 (Drosophila)##U13897|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310596|DLG1|1739|discs, large homolog 1 (Drosophila)##BC015560|DLG1|1739|discs, large homolog 1 (Drosophila)##BC028486|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310893|DLG1|1739|discs, large homolog 1 (Drosophila)##AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203315|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC067856|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK309924|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC094848|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK299863|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC080518|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK311713|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene	0.997849	CTCF.p2:28:0.998
chr7	76784560	76784690	reg1016149.p1	9.266	+	BC036053 NM_020879 BX649000 AK292491 HM370402	-32679	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-528078	-	TSC_hg19_v1_chr7_-_76256148 BC017101	-528422	-	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	44511	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	261093	-	TSC_hg19_v1_chr7_+_77166392 BC050008	381753	+	BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC017101|POMZP3|22932|POM121 and ZP3 fusion##GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)##BC050008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	0.0	
chr10	99167295	99167454	reg1003609.p2	9.265	+	TSC_hg19_v1_chr10_-_99161098 AB014590 BC012745 AK022496 NM_001145114 NM_015179	-6299	-	TSC_hg19_v1_chr10_-_99160995 CU680388 AK296315	-6383	-	TSC_hg19_v1_chr10_-_99094476 BC020165 AB045118 NM_012083	-72921	-	TSC_hg19_v1_chr10_-_99185702 BC009463	18374	-	TSC_hg19_v1_chr10_+_99185978 AK292216	18611	+	TSC_hg19_v1_chr10_+_99186011 AK297491	18633	+	AB014590|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##BC012745|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##AK022496|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##NM_001145114|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##NM_015179|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##AK296315|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##BC020165|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2##AB045118|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2##NM_012083|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2##AK292216|PGAM1|5223|phosphoglycerate mutase 1 (brain)##AK297491|PGAM1|5223|phosphoglycerate mutase 1 (brain)	0.0	
chr15	71732944	71733071	reg1013152.p1	9.265	+	NM_024817 BC140868	-299197	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-325136	-	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	-548032	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	106573	+	AF121129 NM_014249 NM_016346 AF148128	369905	+	AK097557 NM_001166340	673591	+	NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49##AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8	0.456954	CTCF.p2:6:0.457
chr16	25288081	25288207	reg1013548.p1	9.265	+	TSC_hg19_v1_chr16_-_25269141 AK303472	-18939	-	BX648785 AK131342 NM_001012981 AK302399	-19285	-	AB013456 AF067797 NM_001169 AK222975 AK222964	-59844	+	AF105378 NM_006040	415202	+	NM_001145545 BC031257 AK311574	1790103	+	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	1926683	+	AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##BX648785|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK131342|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001012981|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK302399|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AB013456|AQP8|343|aquaporin 8##AF067797|AQP8|343|aquaporin 8##NM_001169|AQP8|343|aquaporin 8##AK222975|AQP8|343|aquaporin 8##AK222964|AQP8|343|aquaporin 8##AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5	0.964572	CTCF.p2:-2:0.965
chr1	63307372	63307521	reg1015677.p1	9.265	+	TSC_hg19_v1_chr1_+_63249807 NM_032852 NM_178221 AK027773 BC018678 BC033024 BC008395	-57633	+	DQ341187 TSC_hg19_v1_chr1_-_63154045 AK055401 NM_033407 AK292640	-153319	-	NM_014495 AK315304 TSC_hg19_v1_chr1_+_63063190 AK289426 BC007059 BC058287 AY358273 AF152562 AB590604 CU691298	-244235	+	AB464527 NM_012183	481283	+	TSC_hg19_v1_chr1_+_63789065 L12142	481638	+	NM_013339 AF063604 TSC_hg19_v1_chr1_+_63833313	525841	+	NM_032852|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_178221|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##AK027773|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC018678|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC033024|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC008395|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##DQ341187|DOCK7|85440|dedicator of cytokinesis 7##AK055401|DOCK7|85440|dedicator of cytokinesis 7##NM_033407|DOCK7|85440|dedicator of cytokinesis 7##AK292640|DOCK7|85440|dedicator of cytokinesis 7##NM_014495|ANGPTL3|27329|angiopoietin-like 3##AK315304|ANGPTL3|27329|angiopoietin-like 3##AK289426|ANGPTL3|27329|angiopoietin-like 3##BC007059|ANGPTL3|27329|angiopoietin-like 3##BC058287|ANGPTL3|27329|angiopoietin-like 3##AY358273|ANGPTL3|27329|angiopoietin-like 3##AF152562|ANGPTL3|27329|angiopoietin-like 3##NM_012183|FOXD3|27022|forkhead box D3##L12142|FOXD3|27022|forkhead box D3##NM_013339|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF063604|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	0.998259	CTCF.p2:-5:0.998
chr3	42881270	42881394	reg1012431.p2	9.265	+	BC011588 BC018716 BC020558 NM_001296 AK313561 BC008816 BC011631	-30363	+	TSC_hg19_v1_chr3_+_42846151 BC033952	-35172	+	TSC_hg19_v1_chr3_-_42845983 AK225461 BC009583 BC009594 BC000601 AF145385 AF077034 BC070277 AK225571 AK311815 AL110233 NM_001099669 NM_014056	-35346	-	AF090318 TSC_hg19_v1_chr3_-_42917348 BC067434 BC067441 BC067442 BC067443 BC067444 AK315330 AK310784	35998	-	NM_004391	36300	-	AK127779 NM_207404	66069	+	BC011588|CCBP2|1238|chemokine binding protein 2##BC018716|CCBP2|1238|chemokine binding protein 2##BC020558|CCBP2|1238|chemokine binding protein 2##NM_001296|CCBP2|1238|chemokine binding protein 2##AK313561|CCBP2|1238|chemokine binding protein 2##BC008816|CCBP2|1238|chemokine binding protein 2##BC011631|CCBP2|1238|chemokine binding protein 2##AK225461|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC009583|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC009594|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC000601|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AF145385|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AF077034|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC070277|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AK225571|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AK311815|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AL110233|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##NM_001099669|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##NM_014056|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AF090318|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067434|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067441|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067442|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067443|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067444|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##AK310784|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##NM_004391|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##AK127779|ZNF662|389114|zinc finger protein 662##NM_207404|ZNF662|389114|zinc finger protein 662	0.22984	CTCF.p2:0:0.230
chr6	114257404	114257525	reg1013643.p1	9.265	+	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	-78730	+	AK122906 NM_001013734	-1588933	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1681569	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	34808	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	34872	-	AF503292 NM_153612 BC093911 BC093913	126560	-	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	0.814699	CTCF.p2:0:0.815
chr10	44418248	44418382	reg1013952.p1	9.264	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-274009	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-274110	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-316418	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	462184	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	988403	+	AK056518 TSC_hg19_v1_chr10_-_45455156	1036832	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.0	
chr4	115616067	115616191	reg1014781.p1	9.264	+	NM_003360 U30930	-72607	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-96546	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-715290	-	BC113075 BC012326 AK289670 AB036429 NM_022569	418852	-	AK074617 BC030831 NM_152402	2390604	-	TSC_hg19_v1_chr4_+_118954764 AY358852	3338642	+	NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.747219	CTCF.p2:14:0.747
chr2	106192938	106193051	reg1013631.p1	9.263	+	NM_201557	-137765	-	TSC_hg19_v1_chr2_-_106015453 BC093049 CR936799 BC036085 BC021049 AK313841 L42176 NM_001039492 BC012742 BC014397 DQ266432 NM_001450 NM_201555	-177443	-	TSC_hg19_v1_chr2_+_105954010 AK127661 BC001310 NM_024093 DQ891212 DQ894395	-238970	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	168549	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	239981	+	NM_001004720 BC000103	275267	+	NM_201557|FHL2|2274|four and a half LIM domains 2##BC093049|FHL2|2274|four and a half LIM domains 2##CR936799|FHL2|2274|four and a half LIM domains 2##BC036085|FHL2|2274|four and a half LIM domains 2##AK313841|FHL2|2274|four and a half LIM domains 2##L42176|FHL2|2274|four and a half LIM domains 2##NM_001039492|FHL2|2274|four and a half LIM domains 2##BC012742|FHL2|2274|four and a half LIM domains 2##BC014397|FHL2|2274|four and a half LIM domains 2##DQ266432|FHL2|2274|four and a half LIM domains 2##NM_001450|FHL2|2274|four and a half LIM domains 2##NM_201555|FHL2|2274|four and a half LIM domains 2##AK127661|C2orf49|79074|chromosome 2 open reading frame 49##BC001310|C2orf49|79074|chromosome 2 open reading frame 49##NM_024093|C2orf49|79074|chromosome 2 open reading frame 49##DQ891212|C2orf49|79074|chromosome 2 open reading frame 49##DQ894395|C2orf49|79074|chromosome 2 open reading frame 49##NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2	0.489163	CTCF.p2:-16:0.489
chr3	53972789	53972929	reg1014443.p1	9.263	+	TSC_hg19_v1_chr3_-_53925897 AF537132 AK289594 BC013162 AK123406 AF085359 AF161415 NM_021237	-46930	-	TSC_hg19_v1_chr3_-_53916202 NM_022899	-56646	-	TSC_hg19_v1_chr3_-_53916180 AK022996	-56723	-	BC137502 BC137505 TSC_hg19_v1_chr3_+_54156614	183740	+	TSC_hg19_v1_chr3_+_54156691 AF516696 NM_018398	183832	+	BC074741 AF225421 NM_020678	989157	-	AF537132|SELK|58515|selenoprotein K##AK289594|SELK|58515|selenoprotein K##BC013162|SELK|58515|selenoprotein K##AK123406|SELK|58515|selenoprotein K##AF085359|SELK|58515|selenoprotein K##AF161415|SELK|58515|selenoprotein K##NM_021237|SELK|58515|selenoprotein K##NM_022899|ACTR8|93973|ARP8 actin-related protein 8 homolog (yeast)##AK022996|ACTR8|93973|ARP8 actin-related protein 8 homolog (yeast)##BC137502|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137505|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##AF516696|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##NM_018398|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1	0.935534	CTCF.p2:0:0.936
chr13	111096788	111096947	reg1013357.p2	9.262	+	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	-137246	+	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	-137358	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	-294132	-	BX648393 TSC_hg19_v1_chr13_+_111134980	38091	+	AK025912 TSC_hg19_v1_chr13_+_111137262	40397	+	TSC_hg19_v1_chr13_+_111138079 M24766	41221	+	AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BX648393|COL4A2|1284|collagen, type IV, alpha 2##AK025912|COL4A2|1284|collagen, type IV, alpha 2##M24766|COL4A2|1284|collagen, type IV, alpha 2	0.066071	
chr5	78316976	78317096	reg1012821.p2	9.262	+	NM_000046	-34680	-	TSC_hg19_v1_chr5_-_78281699 BC029051 NM_198709	-35310	-	TSC_hg19_v1_chr5_-_78281630 M32373	-35440	-	TSC_hg19_v1_chr5_-_78365450 AF111858 AK057641 NM_013391 AK300894 AK303873 AK314736	48413	-	NM_001178005 NM_017614 TSC_hg19_v1_chr5_+_78365558	48518	+	AF257473 TSC_hg19_v1_chr5_+_78365591 AK298298 AK315520 BC020665 DQ891370 DQ894550 AB590411 CU676622	48557	+	NM_000046|ARSB|411|arylsulfatase B##BC029051|ARSB|411|arylsulfatase B##NM_198709|ARSB|411|arylsulfatase B##M32373|ARSB|411|arylsulfatase B##AF111858|DMGDH|29958|dimethylglycine dehydrogenase##AK057641|DMGDH|29958|dimethylglycine dehydrogenase##NM_013391|DMGDH|29958|dimethylglycine dehydrogenase##AK300894|DMGDH|29958|dimethylglycine dehydrogenase##AK303873|DMGDH|29958|dimethylglycine dehydrogenase##AK314736|DMGDH|29958|dimethylglycine dehydrogenase##NM_001178005|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_017614|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AF257473|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK298298|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK315520|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##BC020665|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ891370|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ894550|BHMT2|23743|betaine--homocysteine S-methyltransferase 2	0.994818	CTCF.p2:-16:0.995
chrX	69253380	69253508	reg1014222.p1	9.262	+	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	-417509	+	AF087142 NM_015686 BC136518 BC136519	-528361	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	-868138	-	AB528121 AY605053 NM_001002254	16340	-	AK098697 NM_207320 BC137355 BC137356	28898	+	AK054596 BC004137 NM_001551 AK315660	99895	+	AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AY605053|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##NM_001002254|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##AK098697|OTUD6A|139562|OTU domain containing 6A##NM_207320|OTUD6A|139562|OTU domain containing 6A##BC137355|OTUD6A|139562|OTU domain containing 6A##BC137356|OTUD6A|139562|OTU domain containing 6A##AK054596|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##BC004137|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##NM_001551|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##AK315660|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	0.013219	
chr8	122723253	122723349	reg1009745.p1	9.261	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-69675	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-898795	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-899031	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	1070610	+	BC042145 TSC_hg19_v1_chr8_+_123794000	1070693	+	TSC_hg19_v1_chr8_+_123794108 AB020661	1070802	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.957226	CTCF.p2:14:0.957
chr13	33591849	33591993	reg1015685.p1	9.260	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-1398	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-431238	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-431282	+	AY082590 BC046563 NM_001243466 NM_178007	168294	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	188243	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	267946	-	AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr7	135020484	135020647	reg1013052.p1	9.260	+	AB464251 AF513502 NM_182489	-103835	+	TSC_hg19_v1_chr7_-_134896270 AK001606 BX640957 NM_014149	-124274	-	TSC_hg19_v1_chr7_-_134896267 AF161534 AK022935	-124303	-	BC035590 U71267 U71268 AL389980 TSC_hg19_v1_chr7_-_135194851 AK314540 AK074493 AK300365 NM_001008225 NM_001190847 NM_001190848 NM_001190849 NM_001190850 NM_013316	174295	-	TSC_hg19_v1_chr7_+_135242675 NM_015135 BC136624 AK297307 BC146784 D86978	222123	+	TSC_hg19_v1_chr7_+_135347230 NM_001130929 BC063529 BC073942 BC021734 BC107765 BC047474 BC016741 BC040872	326696	+	AB464251|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AF513502|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##NM_182489|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AK001606|WDR91|29062|WD repeat domain 91##BX640957|WDR91|29062|WD repeat domain 91##NM_014149|WDR91|29062|WD repeat domain 91##AF161534|WDR91|29062|WD repeat domain 91##AK022935|WDR91|29062|WD repeat domain 91##BC035590|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71267|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71268|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AL389980|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK314540|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK074493|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK300365|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001008225|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190847|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190848|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190849|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190850|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_013316|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_015135|NUP205|23165|nucleoporin 205kDa##BC136624|NUP205|23165|nucleoporin 205kDa##AK297307|NUP205|23165|nucleoporin 205kDa##BC146784|NUP205|23165|nucleoporin 205kDa##D86978|NUP205|23165|nucleoporin 205kDa##NM_001130929|C7orf73|647087|chromosome 7 open reading frame 73##BC063529|C7orf73|647087|chromosome 7 open reading frame 73##BC073942|C7orf73|647087|chromosome 7 open reading frame 73##BC021734|C7orf73|647087|chromosome 7 open reading frame 73##BC107765|C7orf73|647087|chromosome 7 open reading frame 73##BC047474|C7orf73|647087|chromosome 7 open reading frame 73##BC016741|C7orf73|647087|chromosome 7 open reading frame 73##BC040872|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4	0.334328	CTCF.p2:30:0.297
chr8	96770988	96771141	reg1013241.p1	9.260	+	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	-489599	-	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	-490013	+	TSC_hg19_v1_chr8_+_96146116 AK023249	-624928	+	BC127948 BC127947 AJ537424 NM_001001557	401917	-	CR542176 CR542196 TSC_hg19_v1_chr8_-_97247774 AK307085 NM_001199975 BC041005 AK295007 AK311756 M22348 X13585 M26700 BC005230 NM_006294	476745	-	BC012995 NM_015942 TSC_hg19_v1_chr8_-_97273837 AK309002	502753	-	BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6##CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_001199975|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC012995|MTERFD1|51001|MTERF domain containing 1##NM_015942|MTERFD1|51001|MTERF domain containing 1##AK309002|MTERFD1|51001|MTERF domain containing 1	0.814679	CTCF.p2:5:0.815
chr12	2962920	2963038	reg1013414.p1	9.258	+	AB528149 AM393084 BC131562 AL136557 AK300944 BC036063 AK098063 NM_031474	-18795	-	NM_018463 TSC_hg19_v1_chr12_+_2921842 AK130319 AK297189 AK291110 AK300905 AK027483 BC006552 BC013399 DQ892711 DQ895963 CU675449 AY599883	-41123	+	TSC_hg19_v1_chr12_+_2904310 AB385011 CU674888 DQ893668 DQ895800	-58677	+	TSC_hg19_v1_chr12_-_2986289 U83113 U74613 U74612 AK313845 BC006192 BC006529 AK291206	23217	-	TSC_hg19_v1_chr12_+_2986385 NM_001252499 NM_001252500 AB073599 AK021945 AK299990 AK304613 AK315364 BC005106	23410	+	TSC_hg19_v1_chr12_-_2986314 NM_001243088 NM_001243089 NM_021953 NM_202002 NM_202003	23478	-	AM393084|NRIP2|83714|nuclear receptor interacting protein 2##BC131562|NRIP2|83714|nuclear receptor interacting protein 2##AL136557|NRIP2|83714|nuclear receptor interacting protein 2##AK300944|NRIP2|83714|nuclear receptor interacting protein 2##BC036063|NRIP2|83714|nuclear receptor interacting protein 2##AK098063|NRIP2|83714|nuclear receptor interacting protein 2##NM_031474|NRIP2|83714|nuclear receptor interacting protein 2##NM_018463|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK130319|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK297189|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK291110|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK300905|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK027483|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC006552|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC013399|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ892711|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ895963|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AY599883|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ893668|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ895800|FKBP4|2288|FK506 binding protein 4, 59kDa##U83113|FOXM1|2305|forkhead box M1##U74613|FOXM1|2305|forkhead box M1##U74612|FOXM1|2305|forkhead box M1##AK313845|FOXM1|2305|forkhead box M1##BC006192|FOXM1|2305|forkhead box M1##BC006529|FOXM1|2305|forkhead box M1##AK291206|FOXM1|2305|forkhead box M1##NM_001252499|C12orf32|83695|chromosome 12 open reading frame 32##NM_001252500|C12orf32|83695|chromosome 12 open reading frame 32##AB073599|C12orf32|83695|chromosome 12 open reading frame 32##AK021945|C12orf32|83695|chromosome 12 open reading frame 32##AK304613|C12orf32|83695|chromosome 12 open reading frame 32##AK315364|C12orf32|83695|chromosome 12 open reading frame 32##BC005106|C12orf32|83695|chromosome 12 open reading frame 32##NM_001243088|FOXM1|2305|forkhead box M1##NM_001243089|FOXM1|2305|forkhead box M1##NM_021953|FOXM1|2305|forkhead box M1##NM_202002|FOXM1|2305|forkhead box M1##NM_202003|FOXM1|2305|forkhead box M1	0.643568	CTCF.p2:-14:0.644
chr14	24712215	24712327	reg1012826.p2	9.258	+	AK315084 AF195512 AK294119 BX161478 TSC_hg19_v1_chr14_-_24711819 AK023166 AK225379 BC019343 BC000710 NM_001099274 NM_012461	-448	-	CU678872 DQ893390 DQ896711 TSC_hg19_v1_chr14_-_24711567 BC005030	-672	-	NM_001002002 NM_016576 BC003053 BC008021 BX247993 BC009832	-10141	+	M55183 BC034699 D90287 AK315828 M62925 AK291350 AK299436 AK315843 AK301652 AK315819 NM_000359	20108	-	TSC_hg19_v1_chr14_-_24740390 AK303247	28117	-	TSC_hg19_v1_chr14_+_24740427 AB593166	28166	+	AK315084|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##AF195512|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##AK294119|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##BX161478|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##AK023166|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##AK225379|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##BC019343|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##NM_001099274|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##NM_012461|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##DQ893390|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##DQ896711|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##BC005030|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##NM_001002002|GMPR2|51292|guanosine monophosphate reductase 2##NM_016576|GMPR2|51292|guanosine monophosphate reductase 2##BC003053|GMPR2|51292|guanosine monophosphate reductase 2##BC008021|GMPR2|51292|guanosine monophosphate reductase 2##BX247993|GMPR2|51292|guanosine monophosphate reductase 2##BC009832|GMPR2|51292|guanosine monophosphate reductase 2##M55183|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##BC034699|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##D90287|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK315828|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##M62925|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK291350|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK299436|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK315843|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK301652|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK315819|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##NM_000359|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK303247|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit	0.743205	CTCF.p2:0:0.743
chr21	45687587	45687705	reg1008080.p1	9.258	+	AF194032 NM_013369 NM_175867	-5548	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	-26789	-	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	-26880	-	BC142608 AK309572 AB006682 NM_000383 Z97990	18098	+	AB006683 AB006685 BC137268 BC137270 NM_000658	22564	+	TSC_hg19_v1_chr21_+_45719932 NM_002626 X15573	32281	+	AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC142608|AIRE|326|autoimmune regulator##AK309572|AIRE|326|autoimmune regulator##AB006682|AIRE|326|autoimmune regulator##NM_000383|AIRE|326|autoimmune regulator##Z97990|AIRE|326|autoimmune regulator##AB006683|AIRE|326|autoimmune regulator##AB006685|AIRE|326|autoimmune regulator##BC137268|AIRE|326|autoimmune regulator##BC137270|AIRE|326|autoimmune regulator##NM_000658|AIRE|326|autoimmune regulator##NM_002626|PFKL|5211|phosphofructokinase, liver##X15573|PFKL|5211|phosphofructokinase, liver	0.0	
chr3	115503456	115503594	reg1016137.p1	9.258	+	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-161106	+	NM_001130064 NM_002045	-161375	+	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	-637411	-	AK315286 TSC_hg19_v1_chr3_-_116164338	660806	-	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	660848	-	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	3250008	-	AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43##BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315286|LSAMP|4045|limbic system-associated membrane protein##BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11	0.997153	CTCF.p2:-6:0.997
chr3	195249153	195249304	reg1012248.p2	9.258	+	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	-85526	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	-257378	-	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-841725	+	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	20885	-	TSC_hg19_v1_chr3_-_195306274 BT019860 BT019861 CR456838 CR541773 CU675645 DQ892668 DQ896124	57074	-	J02611 BC007402 TSC_hg19_v1_chr3_-_195310812 AK312090 AK294523	61602	-	D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BT019860|APOD|347|apolipoprotein D##BT019861|APOD|347|apolipoprotein D##CR456838|APOD|347|apolipoprotein D##CR541773|APOD|347|apolipoprotein D##DQ892668|APOD|347|apolipoprotein D##DQ896124|APOD|347|apolipoprotein D##J02611|APOD|347|apolipoprotein D##BC007402|APOD|347|apolipoprotein D##AK312090|APOD|347|apolipoprotein D##AK294523|APOD|347|apolipoprotein D	0.992823	CTCF.p2:12:0.993
chr6	75920991	75921130	reg1015362.p1	9.258	+	TSC_hg19_v1_chr6_-_75915768 AK307558	-5280	-	BC146868 U73778 NM_004370 NM_080645 TSC_hg19_v1_chr6_-_75915745	-5405	-	TSC_hg19_v1_chr6_+_74406033 AY149920	-1515036	+	CR407646 CR542125 X15822 TSC_hg19_v1_chr6_-_75953494 BC101826 BC101828 AK312154	32419	-	TSC_hg19_v1_chr6_-_75953518 NM_001865	32517	-	AJ420517 TSC_hg19_v1_chr6_-_75965925	44826	-	AK307558|COL12A1|1303|collagen, type XII, alpha 1##BC146868|COL12A1|1303|collagen, type XII, alpha 1##U73778|COL12A1|1303|collagen, type XII, alpha 1##NM_004370|COL12A1|1303|collagen, type XII, alpha 1##NM_080645|COL12A1|1303|collagen, type XII, alpha 1##AY149920|CD109|135228|CD109 molecule##CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##NM_001865|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AJ420517|TMEM30A|55754|transmembrane protein 30A	0.998954	CTCF.p2:-3:0.999
chr10	54500736	54500862	reg1013169.p1	9.257	+	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-426684	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-1041452	-	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-1666508	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	30627	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2060199	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	2857975	+	NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5	0.999432	CTCF.p2:-2:0.999
chr11	32830904	32831013	reg1012540.p1	9.257	+	BC146800 AK131470 NM_001008391 BC062749	-14781	-	TSC_hg19_v1_chr11_+_32605376 AK131064 AK292139 AK304378 AK001768 AK300002 AF064603 BC051292 BC011937 BC019103 NM_006360 AK222564 AK307121 CU676384 AY769947 CR450300 DQ185042	-225560	+	TSC_hg19_v1_chr11_+_32605343 AK312512	-225618	+	TSC_hg19_v1_chr11_+_32851476 BC010052 NM_024081 BC063393 AF326351	20592	+	TSC_hg19_v1_chr11_+_32914677 BC112935 NM_001076786	83617	+	TSC_hg19_v1_chr11_+_33037423 BC030970 NM_001077242 AK294934 BC011446 AJ245600 AK295960 EU446553 CU689058	206490	+	BC146800|CCDC73|493860|coiled-coil domain containing 73##AK131470|CCDC73|493860|coiled-coil domain containing 73##NM_001008391|CCDC73|493860|coiled-coil domain containing 73##BC062749|CCDC73|493860|coiled-coil domain containing 73##AK131064|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK292139|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK304378|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK001768|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK300002|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AF064603|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC051292|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC011937|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC019103|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##NM_006360|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK222564|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK307121|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AY769947|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##CR450300|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##DQ185042|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK312512|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC010052|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##NM_024081|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC063393|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##AF326351|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC112935|QSER1|79832|glutamine and serine rich 1##NM_001076786|QSER1|79832|glutamine and serine rich 1##BC030970|DEPDC7|91614|DEP domain containing 7##NM_001077242|DEPDC7|91614|DEP domain containing 7##AK294934|DEPDC7|91614|DEP domain containing 7##BC011446|DEPDC7|91614|DEP domain containing 7##AJ245600|DEPDC7|91614|DEP domain containing 7##AK295960|DEPDC7|91614|DEP domain containing 7##EU446553|DEPDC7|91614|DEP domain containing 7	0.573452	CTCF.p2:0:0.550
chr14	69557042	69557172	reg1013586.p1	9.257	+	TSC_hg19_v1_chr14_-_69446038 NM_001102 NM_001130004 NM_001130005	-111044	-	TSC_hg19_v1_chr14_-_69446010 BC003576	-111098	-	TSC_hg19_v1_chr14_-_69445990 BC004984	-111115	-	TSC_hg19_v1_chr14_-_69619315 AL831932	62235	-	TSC_hg19_v1_chr14_-_69619740 AB463347 CU692762 BC022967 BX648006 AB058727	62568	-	TSC_hg19_v1_chr14_-_69619843 BC136632	62737	-	NM_001102|ACTN1|87|actinin, alpha 1##NM_001130004|ACTN1|87|actinin, alpha 1##NM_001130005|ACTN1|87|actinin, alpha 1##BC003576|ACTN1|87|actinin, alpha 1##BC004984|ACTN1|87|actinin, alpha 1##AL831932|DCAF5|8816|DDB1 and CUL4 associated factor 5##BC022967|DCAF5|8816|DDB1 and CUL4 associated factor 5##BX648006|DCAF5|8816|DDB1 and CUL4 associated factor 5##AB058727|DCAF5|8816|DDB1 and CUL4 associated factor 5##BC136632|DCAF5|8816|DDB1 and CUL4 associated factor 5	0.239566	CTCF.p2:6:0.240
chr2	178628522	178628638	reg1011735.p1	9.257	+	AK292395 BC042848 NM_152275	-144895	-	TSC_hg19_v1_chr2_-_178483463 CU692122 AK057530 AK125104 BC048006	-145152	-	TSC_hg19_v1_chr2_-_178417525 AK296828 AK055552 BC033795 NM_152517	-211095	-	AJ251509 NM_001077196	124884	-	AF281865 NM_001077358	158962	-	BC112393 BC114431 AB036704 NM_016953 TSC_hg19_v1_chr2_-_178937505 AK309155	308928	-	AK292395|TTC30A|92104|tetratricopeptide repeat domain 30A##BC042848|TTC30A|92104|tetratricopeptide repeat domain 30A##NM_152275|TTC30A|92104|tetratricopeptide repeat domain 30A##AK057530|TTC30A|92104|tetratricopeptide repeat domain 30A##AK125104|TTC30A|92104|tetratricopeptide repeat domain 30A##BC048006|TTC30A|92104|tetratricopeptide repeat domain 30A##AK296828|TTC30B|150737|tetratricopeptide repeat domain 30B##AK055552|TTC30B|150737|tetratricopeptide repeat domain 30B##BC033795|TTC30B|150737|tetratricopeptide repeat domain 30B##NM_152517|TTC30B|150737|tetratricopeptide repeat domain 30B##AJ251509|PDE11A|50940|phosphodiesterase 11A##NM_001077196|PDE11A|50940|phosphodiesterase 11A##AF281865|PDE11A|50940|phosphodiesterase 11A##NM_001077358|PDE11A|50940|phosphodiesterase 11A##BC112393|PDE11A|50940|phosphodiesterase 11A##BC114431|PDE11A|50940|phosphodiesterase 11A##AB036704|PDE11A|50940|phosphodiesterase 11A##NM_016953|PDE11A|50940|phosphodiesterase 11A	0.996378	CTCF.p2:9:0.996
chr3	161277339	161277442	reg1010957.p1	9.257	+	NM_001080440	-62795	+	AF458592 BC037817 NM_001040100	-187582	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-338269	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	3518888	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	3637115	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	4277803	-	NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase	0.0	
chr2	216693396	216693523	reg1014052.p1	9.256	+	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-392677	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-392939	-	AF312399 TSC_hg19_v1_chr2_-_216290008	-403487	-	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	184877	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	253085	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	253233	+	BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##AF312399|FN1|2335|fibronectin 1##AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169	0.0	
chr7	23584623	23584745	reg1013355.p1	9.256	+	CU677835 DQ892442 DQ895653 AB528532 TSC_hg19_v1_chr7_-_23571604 BC069011 BC017094 U53209 AB097048 AK300565 AK311687 AK314801 AK300741 AK310719 AK298815 NM_013293	-13120	-	TSC_hg19_v1_chr7_+_23530136 BC026177	-54517	+	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	-74686	-	TSC_hg19_v1_chr7_+_23637005 NM_138771 AK289911 AY358713 AX721042	52331	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	135139	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	165232	+	DQ892442|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##DQ895653|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC069011|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC017094|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##U53209|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AB097048|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK300565|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK311687|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK314801|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK300741|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK310719|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK298815|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##NM_013293|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_138771|CCDC126|90693|coiled-coil domain containing 126##AK289911|CCDC126|90693|coiled-coil domain containing 126##AY358713|CCDC126|90693|coiled-coil domain containing 126##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31	0.907778	CTCF.p2:19:0.908
chr9	69890184	69890325	reg1015363.p1	9.256	+	AL136793 NM_001098805	-508274	+	AF265442 BC069006 AK293173 NM_001085457	-627700	-	NM_001085476	-688051	-	NM_001126334	288560	-	NM_001099279 NM_199244	539476	-	CU688346 TSC_hg19_v1_chr9_-_70490092	599827	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.981907	CTCF.p2:5:0.982
chr1	184633216	184633370	reg1013522.p2	9.255	+	TSC_hg19_v1_chr1_+_184356377 AK056487	-276905	+	AF312864 TSC_hg19_v1_chr1_+_184356245 AY258286	-277027	+	TSC_hg19_v1_chr1_+_184356194 BC028567	-277096	+	BC144149 BC144150 AF288393 TSC_hg19_v1_chr1_-_184723746 AB385131	90464	-	TSC_hg19_v1_chr1_-_184723964 BC070173 BC105586	90672	-	AK225171 TSC_hg19_v1_chr1_-_184723985 AK315118	90691	-	AK056487|C1orf21|81563|chromosome 1 open reading frame 21##AF312864|C1orf21|81563|chromosome 1 open reading frame 21##AY258286|C1orf21|81563|chromosome 1 open reading frame 21##BC028567|C1orf21|81563|chromosome 1 open reading frame 21##BC144149|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC144150|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AF288393|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC070173|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC105586|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK225171|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK315118|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3	0.280214	CTCF.p2:-8:0.280
chr12	26854688	26854831	reg1013587.p2	9.255	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-506174	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-506468	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	-576838	-	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	131321	-	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	236150	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	236471	-	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)	0.999634	CTCF.p2:-18:1.000
chr2	195031665	195031768	reg1013783.p1	9.254	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-1972087	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	-1972402	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-2319745	-	BC029413 NM_001127257 CR749813	1489859	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	1490192	+	AB463018 AF327442 AK094515 NM_018897 AB023161	1901779	-	BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7	0.316533	CTCF.p2:-11:0.317
chr3	160674718	160674827	reg1013415.p2	9.254	+	AY337264 NM_139245	-200777	+	TSC_hg19_v1_chr3_+_160473386 BC110801	-201432	+	AK026248 NM_025047 BC034354	-279817	+	AB050856 NM_033169 TSC_hg19_v1_chr3_-_160823138 AY359049 BC047618 AK223439 BC028571 AF154848 AK022491 AK095917 NM_001038628 NM_003781 NM_033167 NM_033168	148165	-	AK225664 TSC_hg19_v1_chr3_+_160939097	264324	+	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	264349	+	AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##BC110801|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AK026248|ARL14|80117|ADP-ribosylation factor-like 14##NM_025047|ARL14|80117|ADP-ribosylation factor-like 14##BC034354|ARL14|80117|ADP-ribosylation factor-like 14##AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK225664|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)	0.070948	
chr1	225668739	225668857	reg1014265.p1	9.253	+	NM_194442	-52242	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	-52997	-	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	-53069	-	AF519769 TSC_hg19_v1_chr1_-_225840803 AY345143 AK290179 BC095481 NM_001008493 NM_018212	171989	-	NM_001130440 NM_003133 TSC_hg19_v1_chr1_+_225965547 BC066957 BC008443 EF488978 AF070649 BC021995 BC106005 U20998 BC015094 AK289595 BC022415 BC045603	296734	+	TSC_hg19_v1_chr1_+_225965556 BC064351 AL050363 BC067845	296772	+	NM_194442|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##AF519769|ENAH|55740|enabled homolog (Drosophila)##AY345143|ENAH|55740|enabled homolog (Drosophila)##AK290179|ENAH|55740|enabled homolog (Drosophila)##BC095481|ENAH|55740|enabled homolog (Drosophila)##NM_001008493|ENAH|55740|enabled homolog (Drosophila)##NM_018212|ENAH|55740|enabled homolog (Drosophila)##NM_001130440|SRP9|6726|signal recognition particle 9kDa##NM_003133|SRP9|6726|signal recognition particle 9kDa##BC066957|SRP9|6726|signal recognition particle 9kDa##BC008443|SRP9|6726|signal recognition particle 9kDa##EF488978|SRP9|6726|signal recognition particle 9kDa##AF070649|SRP9|6726|signal recognition particle 9kDa##BC021995|SRP9|6726|signal recognition particle 9kDa##BC106005|SRP9|6726|signal recognition particle 9kDa##U20998|SRP9|6726|signal recognition particle 9kDa##BC015094|SRP9|6726|signal recognition particle 9kDa##AK289595|SRP9|6726|signal recognition particle 9kDa##BC022415|SRP9|6726|signal recognition particle 9kDa##BC064351|SRP9|6726|signal recognition particle 9kDa##AL050363|SRP9|6726|signal recognition particle 9kDa##BC067845|SRP9|6726|signal recognition particle 9kDa	0.0	
chr16	30198735	30198885	reg1016541.p1	9.253	+	AF495470 AK096332 TSC_hg19_v1_chr16_+_30194929 AK296207 AK314714 D44497 X89109 U34690 BC126385 BC126387	-3835	+	NM_001193333 NM_007074 TSC_hg19_v1_chr16_+_30194922 BC110374	-3984	+	TSC_hg19_v1_chr16_-_30134584 NM_001040056 NM_001109891 NM_002746	-64193	-	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	6383	+	BC022832 NM_001031827 NM_001039182	6816	-	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	11758	+	AF495470|CORO1A|11151|coronin, actin binding protein, 1A##AK096332|CORO1A|11151|coronin, actin binding protein, 1A##AK296207|CORO1A|11151|coronin, actin binding protein, 1A##AK314714|CORO1A|11151|coronin, actin binding protein, 1A##D44497|CORO1A|11151|coronin, actin binding protein, 1A##X89109|CORO1A|11151|coronin, actin binding protein, 1A##U34690|CORO1A|11151|coronin, actin binding protein, 1A##BC126385|CORO1A|11151|coronin, actin binding protein, 1A##BC126387|CORO1A|11151|coronin, actin binding protein, 1A##NM_001193333|CORO1A|11151|coronin, actin binding protein, 1A##NM_007074|CORO1A|11151|coronin, actin binding protein, 1A##BC110374|CORO1A|11151|coronin, actin binding protein, 1A##NM_001040056|MAPK3|5595|mitogen-activated protein kinase 3##NM_001109891|MAPK3|5595|mitogen-activated protein kinase 3##NM_002746|MAPK3|5595|mitogen-activated protein kinase 3##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3	0.549641	CTCF.p2:-5:0.550
chr4	41214743	41214872	reg1012426.p2	9.253	+	BC088372 TSC_hg19_v1_chr4_-_40936716	-278129	-	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-355632	-	BC042401 NM_024677 BC036568 AK024063	-462861	+	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	1762	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	44089	+	TSC_hg19_v1_chr4_+_41258913 BC000332 BC018838	44111	+	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.0	
chr7	10929055	10929172	reg1011151.p1	9.253	+	AK315141 TSC_hg19_v1_chr7_+_8474016 AK091655 BC047505 AK296248	-2454993	+	AB047362 AB073665 NM_152745 TSC_hg19_v1_chr7_+_8473633	-2455503	+	TSC_hg19_v1_chr7_+_8473238 AK095624	-2455875	+	CR407618 CR541716 TSC_hg19_v1_chr7_-_10979730 AF201077 BC101794 BC101796	50596	-	AK130950 TSC_hg19_v1_chr7_-_10979760 AK024837 U94586 BC105295 NM_002489	50671	-	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	84397	+	AK315141|NXPH1|30010|neurexophilin 1##AK091655|NXPH1|30010|neurexophilin 1##BC047505|NXPH1|30010|neurexophilin 1##AK296248|NXPH1|30010|neurexophilin 1##AB047362|NXPH1|30010|neurexophilin 1##AB073665|NXPH1|30010|neurexophilin 1##NM_152745|NXPH1|30010|neurexophilin 1##AK095624|NXPH1|30010|neurexophilin 1##CR407618|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR541716|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AF201077|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101794|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101796|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK130950|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK024837|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##U94586|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC105295|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_002489|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14	0.125305	
chr7	98963274	98963373	reg1013402.p1	9.252	+	NM_001190996 NM_006409 TSC_hg19_v1_chr7_+_98923532 AK297111 BC039594 BC006445 AB209059 BC047889 BC054027	-39783	+	EU126604 NM_001145715	-158235	-	TSC_hg19_v1_chr7_-_98741752 AB046845 BC152468 NM_001199847 NM_020429 NM_181349	-221574	-	TSC_hg19_v1_chr7_+_98972300 NM_005720	8971	+	TSC_hg19_v1_chr7_+_98972332 BC002988 AF006084	9013	+	TSC_hg19_v1_chr7_+_98972352 AK314818 BC002562 BC007555	9043	+	NM_001190996|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##NM_006409|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##BC039594|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##BC006445|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##AB209059|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##BC047889|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##BC054027|ARPC1A|10552|actin related protein 2/3 complex, subunit 1A, 41kDa##EU126604|KPNA7|402569|karyopherin alpha 7 (importin alpha 8)##NM_001145715|KPNA7|402569|karyopherin alpha 7 (importin alpha 8)##AB046845|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##BC152468|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##NM_001199847|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##NM_020429|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##NM_181349|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##NM_005720|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##BC002988|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##AF006084|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##AK314818|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##BC002562|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##BC007555|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa	0.973485	CTCF.p2:6:0.973
chr19	40388538	40388699	reg1013070.p1	9.251	+	AK296950 TSC_hg19_v1_chr19_-_40337020 NM_001436	-51583	-	TSC_hg19_v1_chr19_-_40337007 BC019260 AK308649	-51612	-	AB463635 M59849 TSC_hg19_v1_chr19_-_40336992	-51650	-	D84239 NM_003890	51914	-	TSC_hg19_v1_chr19_+_40477090 AF020736 AK313183 NM_006503 NM_153001 BC010396 AK310135 AF038965 BC000343 BC014488 BC018811 U27515 AK290285 DQ891875 DQ894876 BT007232 CU679695	88452	+	NM_178544 AK122968 AK292528 BC045649	114367	+	AK296950|FBL|2091|fibrillarin##NM_001436|FBL|2091|fibrillarin##BC019260|FBL|2091|fibrillarin##AK308649|FBL|2091|fibrillarin##M59849|FBL|2091|fibrillarin##D84239|FCGBP|8857|Fc fragment of IgG binding protein##NM_003890|FCGBP|8857|Fc fragment of IgG binding protein##AF020736|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK313183|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_006503|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_153001|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC010396|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK310135|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AF038965|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC000343|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC014488|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC018811|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##U27515|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK290285|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##DQ891875|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##DQ894876|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BT007232|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_178544|ZNF546|339327|zinc finger protein 546##AK122968|ZNF546|339327|zinc finger protein 546##AK292528|ZNF546|339327|zinc finger protein 546##BC045649|ZNF546|339327|zinc finger protein 546	0.815737	CTCF.p2:-26:0.816
chr7	99728735	99728829	reg1013305.p2	9.251	+	BC031288 NM_203397	-4463	+	AK300005 NM_001190415	-11311	-	AY359100 BC032339 NM_152755 AK075537 BC019903 DQ891593 EU176583	-11469	+	TSC_hg19_v1_chr7_+_99746538 NM_001008395 BC105609 BC063401 BC130553 BC130559	17773	+	TSC_hg19_v1_chr7_-_99756309 BC015722 NM_018275 BC094727 AK310170	27517	-	TSC_hg19_v1_chr7_-_99756347 AK054872	27566	-	BC031288|MBLAC1|255374|metallo-beta-lactamase domain containing 1##NM_203397|MBLAC1|255374|metallo-beta-lactamase domain containing 1##AK300005|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa##NM_001190415|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa##AY359100|CNPY4|245812|canopy 4 homolog (zebrafish)##BC032339|CNPY4|245812|canopy 4 homolog (zebrafish)##NM_152755|CNPY4|245812|canopy 4 homolog (zebrafish)##AK075537|CNPY4|245812|canopy 4 homolog (zebrafish)##BC019903|CNPY4|245812|canopy 4 homolog (zebrafish)##DQ891593|CNPY4|245812|canopy 4 homolog (zebrafish)##EU176583|CNPY4|245812|canopy 4 homolog (zebrafish)##NM_001008395|C7orf59|389541|chromosome 7 open reading frame 59##BC105609|C7orf59|389541|chromosome 7 open reading frame 59##BC063401|C7orf59|389541|chromosome 7 open reading frame 59##BC130553|C7orf59|389541|chromosome 7 open reading frame 59##BC130559|C7orf59|389541|chromosome 7 open reading frame 59##BC015722|C7orf43|55262|chromosome 7 open reading frame 43##NM_018275|C7orf43|55262|chromosome 7 open reading frame 43##BC094727|C7orf43|55262|chromosome 7 open reading frame 43##AK310170|C7orf43|55262|chromosome 7 open reading frame 43##AK054872|C7orf43|55262|chromosome 7 open reading frame 43	0.505087	CTCF.p2:0:0.505
chr2	153032517	153032642	reg1011724.p3	9.250	+	TSC_hg19_v1_chr2_-_153032266 AB463258 AM393419 CU688564 DQ892427 DQ895641 AK292265 AK292847 AK310863 AF042273 AF042274 AL133600 BC022277 BC028740 NM_005843	-229	-	TSC_hg19_v1_chr2_-_152955813 AK291378	-76768	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	-77032	-	TSC_hg19_v1_chr2_+_153191687 NM_052905	159091	+	BC113878 BC114438 TSC_hg19_v1_chr2_+_153191857 AB067489 BC167159 AB385514	159394	+	TSC_hg19_v1_chr2_-_153573924 U70667 AF049524 AF049528 BC000273 BC073138 BC011788 AF049523 AK298547 AK024810 BC029414 NM_017892	541341	-	AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK291378|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_052905|FMNL2|114793|formin-like 2##BC113878|FMNL2|114793|formin-like 2##BC114438|FMNL2|114793|formin-like 2##AB067489|FMNL2|114793|formin-like 2##BC167159|FMNL2|114793|formin-like 2##U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	0.010104	
chr1	212541447	212541583	reg1013400.p1	9.249	+	AK302202 NM_001199756	-66368	+	TSC_hg19_v1_chr1_+_212459262 BC022474 AB527512 DQ892361 DQ895568	-82158	+	BC110883 TSC_hg19_v1_chr1_+_212459259	-82301	+	AK295224 CR457268 CU675347 TSC_hg19_v1_chr1_-_212588229 BC006320	46638	-	TSC_hg19_v1_chr1_-_212588235 AK001736	46720	-	TSC_hg19_v1_chr1_-_212588248 AK297200 NM_001198862 AK024066 NM_018252	46737	-	AK302202|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##NM_001199756|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##BC022474|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##DQ892361|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##DQ895568|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##BC110883|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##AK295224|TMEM206|55248|transmembrane protein 206##CR457268|TMEM206|55248|transmembrane protein 206##BC006320|TMEM206|55248|transmembrane protein 206##AK001736|TMEM206|55248|transmembrane protein 206##AK297200|TMEM206|55248|transmembrane protein 206##NM_001198862|TMEM206|55248|transmembrane protein 206##AK024066|TMEM206|55248|transmembrane protein 206##NM_018252|TMEM206|55248|transmembrane protein 206	0.868334	CTCF.p2:4:0.868
chr15	73997236	73997393	reg1014653.p1	9.249	+	TSC_hg19_v1_chr15_+_73976784 AK296358 AK291721 AK309728	-20529	+	TSC_hg19_v1_chr15_+_73976732 AK298522 AK292711 AK074849	-20572	+	TSC_hg19_v1_chr15_+_73976696 AY358343	-20617	+	BC111368 NM_001039614	46501	-	BC033516 NM_153356 AB449907	168694	+	TSC_hg19_v1_chr15_+_74218789 NM_005576	221475	+	AK296358|CD276|80381|CD276 molecule##AK291721|CD276|80381|CD276 molecule##AK309728|CD276|80381|CD276 molecule##AK298522|CD276|80381|CD276 molecule##AK292711|CD276|80381|CD276 molecule##AK074849|CD276|80381|CD276 molecule##AY358343|CD276|80381|CD276 molecule##BC111368|C15orf59|388135|chromosome 15 open reading frame 59##NM_001039614|C15orf59|388135|chromosome 15 open reading frame 59##BC033516|TBC1D21|161514|TBC1 domain family, member 21##NM_153356|TBC1D21|161514|TBC1 domain family, member 21##AB449907|TBC1D21|161514|TBC1 domain family, member 21##NM_005576|LOXL1|4016|lysyl oxidase-like 1	0.830401	CTCF.p2:20:0.830
chr3	39489482	39489607	reg1014075.p1	9.249	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	-40402	+	BC070263 NM_002295 TSC_hg19_v1_chr3_+_39448210 BC066941 BC107567 BC005391 BC062714 D28372 AF503367 BC013827 BC050688 X15005 BC034537 BC053370 BC071968 BC010418 BC071693 BC018867 BC071969 BC073863	-41334	+	TSC_hg19_v1_chr3_+_39424860 NM_017875 AK000558 AK225388 BC013194 CR457242	-64554	+	NM_182935 BC075796 AK127034 AK290187 BC022471	19575	+	TSC_hg19_v1_chr3_+_39851138 BC092512 AK126013 AF396687 NM_015460 BC109311 BC109312	361631	+	BC031275 AK057627 AK309874 AK309698 TSC_hg19_v1_chr3_-_40351022 BC045736 BC118565 BC106900	861524	-	BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA##BC070263|RPSA|3921|ribosomal protein SA##NM_002295|RPSA|3921|ribosomal protein SA##BC066941|RPSA|3921|ribosomal protein SA##BC107567|RPSA|3921|ribosomal protein SA##BC005391|RPSA|3921|ribosomal protein SA##BC062714|RPSA|3921|ribosomal protein SA##AF503367|RPSA|3921|ribosomal protein SA##BC013827|RPSA|3921|ribosomal protein SA##BC050688|RPSA|3921|ribosomal protein SA##X15005|RPSA|3921|ribosomal protein SA##BC034537|RPSA|3921|ribosomal protein SA##BC053370|RPSA|3921|ribosomal protein SA##BC071968|RPSA|3921|ribosomal protein SA##BC010418|RPSA|3921|ribosomal protein SA##BC071693|RPSA|3921|ribosomal protein SA##BC018867|RPSA|3921|ribosomal protein SA##BC071969|RPSA|3921|ribosomal protein SA##BC073863|RPSA|3921|ribosomal protein SA##NM_017875|SLC25A38|54977|solute carrier family 25, member 38##AK000558|SLC25A38|54977|solute carrier family 25, member 38##AK225388|SLC25A38|54977|solute carrier family 25, member 38##BC013194|SLC25A38|54977|solute carrier family 25, member 38##CR457242|SLC25A38|54977|solute carrier family 25, member 38##NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC092512|MYRIP|25924|myosin VIIA and Rab interacting protein##AK126013|MYRIP|25924|myosin VIIA and Rab interacting protein##AF396687|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_015460|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109311|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109312|MYRIP|25924|myosin VIIA and Rab interacting protein##BC031275|FLJ33065|440952|uncharacterized LOC440952##AK057627|FLJ33065|440952|uncharacterized LOC440952##AK309874|FLJ33065|440952|uncharacterized LOC440952##BC045736|FLJ33065|440952|uncharacterized LOC440952##BC118565|FLJ33065|440952|uncharacterized LOC440952##BC106900|FLJ33065|440952|uncharacterized LOC440952	0.999822	CTCF.p2:2:1.000
chr6	138261147	138261276	reg1012438.p1	9.249	+	TSC_hg19_v1_chr6_-_138189314 AK124173	-71861	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-72674	+	BC051352 AK096362 NM_175747	-445686	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	167357	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	221925	+	BC069109 NM_021635 AF189269 AF189270	278415	-	AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1	0.190307	
chr6	27759961	27760090	reg1005240.p1	9.249	+	TSC_hg19_v1_chr6_-_27440879 BC022992 AK123011 AK312804 NM_007149	-319324	-	TSC_hg19_v1_chr6_+_27356537 NM_001076781 AK092633 AK294965 AX747641 BC132797	-403470	+	AF352327 AF336874 BC107050 NM_032030	-467467	+	EU446971 TSC_hg19_v1_chr6_-_27775708 NM_003519 AK312114 BC093759 BC093761	15698	-	BC112254 BC112256 TSC_hg19_v1_chr6_+_27775950 AK311766 BC062305 NM_003509 HQ258047	15916	+	BC007518 TSC_hg19_v1_chr6_+_27777828 AK311991 NM_003536 EU446975 BC096128 BC096129 BC096130 BC143046 BC148243 BC148250	17757	+	BC022992|ZNF184|7738|zinc finger protein 184##AK123011|ZNF184|7738|zinc finger protein 184##AK312804|ZNF184|7738|zinc finger protein 184##NM_007149|ZNF184|7738|zinc finger protein 184##NM_001076781|ZNF391|346157|zinc finger protein 391##AK092633|ZNF391|346157|zinc finger protein 391##AK294965|ZNF391|346157|zinc finger protein 391##BC132797|ZNF391|346157|zinc finger protein 391##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83##EU446971|HIST1H2BL|8340|histone cluster 1, H2bl##NM_003519|HIST1H2BL|8340|histone cluster 1, H2bl##AK312114|HIST1H2BL|8340|histone cluster 1, H2bl##BC093759|HIST1H2BL|8340|histone cluster 1, H2bl##BC093761|HIST1H2BL|8340|histone cluster 1, H2bl##BC112254|HIST1H2AI|8329|histone cluster 1, H2ai##BC112256|HIST1H2AI|8329|histone cluster 1, H2ai##AK311766|HIST1H2AI|8329|histone cluster 1, H2ai##BC062305|HIST1H3F|8968|histone cluster 1, H3f##NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai##HQ258047|HIST1H2AM|8336|histone cluster 1, H2am##BC007518|HIST1H3H|8357|histone cluster 1, H3h##AK311991|HIST1H3H|8357|histone cluster 1, H3h##NM_003536|HIST1H3H|8357|histone cluster 1, H3h##EU446975|HIST1H3H|8357|histone cluster 1, H3h##BC096128|HIST1H3H|8357|histone cluster 1, H3h##BC096129|HIST1H3H|8357|histone cluster 1, H3h##BC096130|HIST1H3H|8357|histone cluster 1, H3h##BC143046|HIST1H3H|8357|histone cluster 1, H3h##BC148243|HIST1H3H|8357|histone cluster 1, H3h##BC148250|HIST1H3H|8357|histone cluster 1, H3h	0.050505	
chr8	24052121	24052254	reg1014602.p1	9.249	+	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	-339876	-	AB464642 NM_001136271	-488077	-	AB464643 AF249669 AF249670 AF249671 AF249672 EU446642 U91540 U80669 BC074863 BC074864 BC111569 BC111574 AF247704 NM_006167 TSC_hg19_v1_chr8_-_23540449	-511756	-	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	99420	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	189720	+	BC058037 AK292492 NM_003817 AF215824 CU691292 AB527100	246344	+	BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1##AB464642|NKX2-6|137814|NK2 homeobox 6##NM_001136271|NKX2-6|137814|NK2 homeobox 6##AF249669|NKX3-1|4824|NK3 homeobox 1##AF249670|NKX3-1|4824|NK3 homeobox 1##AF249671|NKX3-1|4824|NK3 homeobox 1##AF249672|NKX3-1|4824|NK3 homeobox 1##EU446642|NKX3-1|4824|NK3 homeobox 1##U91540|NKX3-1|4824|NK3 homeobox 1##U80669|NKX3-1|4824|NK3 homeobox 1##BC074863|NKX3-1|4824|NK3 homeobox 1##BC074864|NKX3-1|4824|NK3 homeobox 1##AF247704|NKX3-1|4824|NK3 homeobox 1##NM_006167|NKX3-1|4824|NK3 homeobox 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1##BC058037|ADAM7|8756|ADAM metallopeptidase domain 7##AK292492|ADAM7|8756|ADAM metallopeptidase domain 7##NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7##AF215824|ADAM7|8756|ADAM metallopeptidase domain 7	0.83599	CTCF.p2:-3:0.836
chr13	103841179	103841311	reg1012635.p1	9.248	+	NM_000452 U10417	-122050	-	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-342759	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-342991	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	2277059	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	2277346	+	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	3346104	-	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2	0.981378	CTCF.p2:-4:0.981
chr14	55904942	55905048	reg1013504.p2	9.248	+	BC028015 AB587548 AK292810 TSC_hg19_v1_chr14_-_55878549 BC109089 BC109090 AK131251 NM_014924	-26439	-	NM_152231	-166124	+	TSC_hg19_v1_chr14_+_55738114 BX248268 BC095482	-166837	+	AY457923 HQ258397 NM_199047 DQ448593 BC117185 BC117159	2302	-	BX248296 TSC_hg19_v1_chr14_-_56046835 AK124927	141821	-	TSC_hg19_v1_chr14_+_56046963 NM_001079521 NM_001079522 NM_004986 NM_182926 BC066337 D13629 AK302797 BC050555 BC058736 Z22551 AY264265 BC112337	142107	+	BC028015|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##AK292810|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##BC109089|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##BC109090|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##AK131251|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##NM_014924|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##NM_152231|FBXO34|55030|F-box protein 34##BX248268|FBXO34|55030|F-box protein 34##BC095482|FBXO34|55030|F-box protein 34##AY457923|TBPL2|387332|TATA box binding protein like 2##HQ258397|TBPL2|387332|TATA box binding protein like 2##NM_199047|TBPL2|387332|TATA box binding protein like 2##DQ448593|TBPL2|387332|TATA box binding protein like 2##BC117185|TBPL2|387332|TATA box binding protein like 2##BC117159|TBPL2|387332|TATA box binding protein like 2##BX248296|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##AK124927|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##NM_001079521|KTN1|3895|kinectin 1 (kinesin receptor)##NM_001079522|KTN1|3895|kinectin 1 (kinesin receptor)##NM_004986|KTN1|3895|kinectin 1 (kinesin receptor)##NM_182926|KTN1|3895|kinectin 1 (kinesin receptor)##BC066337|KTN1|3895|kinectin 1 (kinesin receptor)##D13629|KTN1|3895|kinectin 1 (kinesin receptor)##AK302797|KTN1|3895|kinectin 1 (kinesin receptor)##BC050555|KTN1|3895|kinectin 1 (kinesin receptor)##BC058736|KTN1|3895|kinectin 1 (kinesin receptor)##Z22551|KTN1|3895|kinectin 1 (kinesin receptor)##AY264265|KTN1|3895|kinectin 1 (kinesin receptor)##BC112337|KTN1|3895|kinectin 1 (kinesin receptor)	0.98761	CTCF.p2:-1:0.988
chr15	89019950	89020070	reg1012923.p1	9.248	+	TSC_hg19_v1_chr15_+_89010935 BC032378 BC012489 AK027059 AK026165 AK222933 AK315407 AK223152 BC000200 CU680342 CU689362 DQ891586 DQ894780 BC009451	-9084	+	AB049944 NM_022839 NM_176805	-9327	+	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	-9382	-	BC109060 BC109061 BC073867 AK054603 BC064591 AB073887 NM_001144074 NM_017996	69841	-	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	144560	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	162176	+	BC032378|MRPS11|64963|mitochondrial ribosomal protein S11##BC012489|MRPS11|64963|mitochondrial ribosomal protein S11##AK027059|MRPS11|64963|mitochondrial ribosomal protein S11##AK026165|MRPS11|64963|mitochondrial ribosomal protein S11##AK222933|MRPS11|64963|mitochondrial ribosomal protein S11##AK315407|MRPS11|64963|mitochondrial ribosomal protein S11##AK223152|MRPS11|64963|mitochondrial ribosomal protein S11##BC000200|MRPS11|64963|mitochondrial ribosomal protein S11##DQ891586|MRPS11|64963|mitochondrial ribosomal protein S11##DQ894780|MRPS11|64963|mitochondrial ribosomal protein S11##BC009451|MRPS11|64963|mitochondrial ribosomal protein S11##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa	0.818693	CTCF.p2:-29:0.819
chr6	133151518	133151628	reg1012191.p1	9.248	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	-15854	+	TSC_hg19_v1_chr6_+_133135707 AK096147 NM_001016 D28378 X53505	-15866	+	AK124442 BC069570 AK293853 TSC_hg19_v1_chr6_-_133119740 NM_052831 AK289918	-31872	-	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	410918	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	410959	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	1058681	+	AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##AK096147|SNORA33|594839|small nucleolar RNA, H/ACA box 33##NM_001016|RPS12|6206|ribosomal protein S12##D28378|RPS12|6206|ribosomal protein S12##X53505|RPS12|6206|ribosomal protein S12##AK124442|C6orf192|116843|chromosome 6 open reading frame 192##BC069570|C6orf192|116843|chromosome 6 open reading frame 192##AK293853|C6orf192|116843|chromosome 6 open reading frame 192##NM_052831|C6orf192|116843|chromosome 6 open reading frame 192##AK289918|C6orf192|116843|chromosome 6 open reading frame 192##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21	0.772231	CTCF.p2:-17:0.772
chr6	88102873	88103027	reg1015467.p1	9.248	+	NM_001010868	-48380	+	BC057813 NM_198568	-63955	-	TSC_hg19_v1_chr6_+_88032305 NM_001042493 NM_020425 BC070260 BC032824 AK311963	-70639	+	NM_001031743 BC035083 AK292584 AK093830 AX748329 BC045171	14766	+	TSC_hg19_v1_chr6_+_88182658 NM_001168398 NM_006416	79701	+	TSC_hg19_v1_chr6_+_88182694 AK293696 AK299432 BC008372 BC017807 D87969	79736	+	NM_001010868|C6orf163|206412|chromosome 6 open reading frame 163##BC057813|GJB7|375519|gap junction protein, beta 7, 25kDa##NM_198568|GJB7|375519|gap junction protein, beta 7, 25kDa##NM_001042493|C6orf162|57150|chromosome 6 open reading frame 162##NM_020425|C6orf162|57150|chromosome 6 open reading frame 162##BC070260|C6orf162|57150|chromosome 6 open reading frame 162##AK311963|C6orf162|57150|chromosome 6 open reading frame 162##NM_001031743|C6orf165|154313|chromosome 6 open reading frame 165##BC035083|C6orf165|154313|chromosome 6 open reading frame 165##AK093830|C6orf165|154313|chromosome 6 open reading frame 165##BC045171|C6orf165|154313|chromosome 6 open reading frame 165##NM_001168398|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##NM_006416|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##AK293696|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##AK299432|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##BC008372|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##BC017807|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##D87969|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1	0.647867	CTCF.p2:-6:0.648
chr1	149379616	149379731	reg1013550.p2	9.247	+	NM_001164261 NM_001164262	-573659	+	NM_001102663 AK290302 AY894562 AY894566	-640172	+	NM_001144032	-735663	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	19523	-	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	173350	+	X14355 AK311303 NM_000566 X14356 AK291451 BC032634 AB527585 BC152383 CU689454 DQ890842 DQ893997 L03418	374599	+	NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001144032|PPIAL4E|730262|peptidylprolyl isomerase A (cyclophilin A)-like 4E##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##X14355|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##NM_000566|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##X14356|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK291451|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC032634|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC152383|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ890842|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ893997|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##L03418|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)	0.997973	CTCF.p2:13:0.998
chr1	243488724	243488858	reg1015124.p1	9.247	+	TSC_hg19_v1_chr1_+_243419405 AK297105 AF250731	-69356	+	BC032454 TSC_hg19_v1_chr1_+_243419371 AK299249	-69420	+	TSC_hg19_v1_chr1_+_243419357 AK299212	-69436	+	AF135794 AB463341 AM392791 AM392849 AJ245709 AF124141 AK308052 BC020479 AF085234 AY005799 BC121154 NM_005465 NM_181690	517736	-	AL117525 NM_001206729	518094	-	TSC_hg19_v1_chr1_+_244214553 NM_205768	725765	+	AK297105|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF250731|SDCCAG8|10806|serologically defined colon cancer antigen 8##BC032454|SDCCAG8|10806|serologically defined colon cancer antigen 8##AK299249|SDCCAG8|10806|serologically defined colon cancer antigen 8##AK299212|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF135794|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392791|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392849|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AJ245709|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF124141|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AK308052|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC020479|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF085234|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AY005799|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC121154|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_005465|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_181690|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AL117525|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_001206729|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_205768|ZNF238|10472|zinc finger protein 238	0.545226	CTCF.p2:15:0.545
chr15	84642695	84642839	reg1013733.p2	9.247	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-319940	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-526539	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-526707	+	NM_001243531	198474	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	501514	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	554705	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.922068	CTCF.p2:-2:0.922
chr18	47721553	47721714	reg1013834.p1	9.247	+	AB384567 AB032945 TSC_hg19_v1_chr18_-_47721518 AB290160 BC032511 NM_001080467	-261	-	TSC_hg19_v1_chr18_-_47376221 BC033527	-345444	-	TSC_hg19_v1_chr18_+_47340396 AK123464	-381242	+	AB527886 BC030606 NM_145020 AK302114	71199	-	AF078830 AF078831 AF078832 AF078833 EF488685 AB527669 NM_001204151	84740	-	AK295401 TSC_hg19_v1_chr18_-_47807854 BC012487 BC047353 AK302004 AJ564845 Y10746 AK225948	86136	-	AB032945|MYO5B|4645|myosin VB##AB290160|MYO5B|4645|myosin VB##BC032511|MYO5B|4645|myosin VB##NM_001080467|MYO5B|4645|myosin VB##BC033527|MYO5B|4645|myosin VB##BC030606|CCDC11|220136|coiled-coil domain containing 11##NM_145020|CCDC11|220136|coiled-coil domain containing 11##AK302114|CCDC11|220136|coiled-coil domain containing 11##AF078830|MBD1|4152|methyl-CpG binding domain protein 1##AF078831|MBD1|4152|methyl-CpG binding domain protein 1##AF078832|MBD1|4152|methyl-CpG binding domain protein 1##AF078833|MBD1|4152|methyl-CpG binding domain protein 1##EF488685|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204151|MBD1|4152|methyl-CpG binding domain protein 1##AK295401|MBD1|4152|methyl-CpG binding domain protein 1##BC047353|MBD1|4152|methyl-CpG binding domain protein 1##AK302004|MBD1|4152|methyl-CpG binding domain protein 1##AJ564845|MBD1|4152|methyl-CpG binding domain protein 1##Y10746|MBD1|4152|methyl-CpG binding domain protein 1##AK225948|MBD1|4152|methyl-CpG binding domain protein 1	0.999235	CTCF.p2:0:0.999
chr2	178160911	178161068	reg1012919.p1	9.247	+	AK314816 NM_006164	-31131	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	-31613	-	AK311688 NM_001145412 NM_001145413	-32418	-	TSC_hg19_v1_chr2_-_178257411 BC093095 AL833088 AK126517	96418	-	AK309714 TSC_hg19_v1_chr2_+_178257487 NM_003659	96440	+	TSC_hg19_v1_chr2_+_178257497 AK225439 AK314259 Y09443 BC141820 AY544121 AK296239 AK316240	96640	+	AK314816|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_006164|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##AL833088|LOC100130691|100130691|uncharacterized LOC100130691##AK126517|LOC100130691|100130691|uncharacterized LOC100130691##AK309714|AGPS|8540|alkylglycerone phosphate synthase##NM_003659|AGPS|8540|alkylglycerone phosphate synthase##AK314259|AGPS|8540|alkylglycerone phosphate synthase##Y09443|AGPS|8540|alkylglycerone phosphate synthase##BC141820|AGPS|8540|alkylglycerone phosphate synthase##AY544121|AGPS|8540|alkylglycerone phosphate synthase##AK296239|AGPS|8540|alkylglycerone phosphate synthase##AK316240|AGPS|8540|alkylglycerone phosphate synthase	0.975307	CTCF.p2:16:0.975
chr4	153767986	153768131	reg1015858.p1	9.247	+	TSC_hg19_v1_chr4_+_153701117 AK290472 U52521 BC103759 BC105114 BC105116 BC143675 BC143676 AK096509	-66931	+	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	-67037	+	BC037869 NM_145720	-67155	-	NM_033393 AB051514	96132	+	BC011052 NM_001130067	306211	+	TSC_hg19_v1_chr4_+_154125594 AK308731 NM_015271 AB011089 AF220018	357547	+	AK290472|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##U52521|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC103759|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105114|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105116|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143675|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143676|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK096509|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC037869|TIGD4|201798|tigger transposable element derived 4##NM_145720|TIGD4|201798|tigger transposable element derived 4##NM_033393|FHDC1|85462|FH2 domain containing 1##AB051514|FHDC1|85462|FH2 domain containing 1##BC011052|TRIM2|23321|tripartite motif containing 2##NM_001130067|TRIM2|23321|tripartite motif containing 2##AK308731|TRIM2|23321|tripartite motif containing 2##NM_015271|TRIM2|23321|tripartite motif containing 2##AB011089|TRIM2|23321|tripartite motif containing 2##AF220018|TRIM2|23321|tripartite motif containing 2	0.739277	CTCF.p2:-16:0.739
chr1	117424520	117424648	reg1014172.p1	9.246	+	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	-127477	+	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	-214201	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	-310907	-	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	28058	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	119821	+	AK291017 TSC_hg19_v1_chr1_+_117602939	178340	+	AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule##AK291017|TTF2|8458|transcription termination factor, RNA polymerase II	0.050404	
chr1	147362471	147362582	reg1014293.p1	9.246	+	NM_005266	-117043	-	BC013313 NM_181703	-129828	-	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	-220032	-	NM_005267	12419	+	TSC_hg19_v1_chr1_+_147400532 AK021758 NM_016334 AL133020 AY358966 AB097024 AB097025 AK223223 AK299995 AK302266 BC067816 AF132947 U78723	37996	+	TSC_hg19_v1_chr1_+_147400563 BC146880 AK316371 BC003187 AB528816 DQ890650 DQ893830 BT006679	38075	+	NM_005266|GJA5|2702|gap junction protein, alpha 5, 40kDa##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa##AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa##AK021758|GPR89A|653519|G protein-coupled receptor 89A##NM_016334|GPR89B|51463|G protein-coupled receptor 89B##AL133020|GPR89B|51463|G protein-coupled receptor 89B##AY358966|GPR89A|653519|G protein-coupled receptor 89A##AB097024|GPR89A|653519|G protein-coupled receptor 89A##AB097025|GPR89A|653519|G protein-coupled receptor 89A##AK223223|GPR89A|653519|G protein-coupled receptor 89A##AK299995|GPR89A|653519|G protein-coupled receptor 89A##AK302266|GPR89B|51463|G protein-coupled receptor 89B##BC067816|GPR89A|653519|G protein-coupled receptor 89A##AF132947|GPR89A|653519|G protein-coupled receptor 89A##U78723|GPR89B|51463|G protein-coupled receptor 89B##BC146880|GPR89A|653519|G protein-coupled receptor 89A##AK316371|GPR89A|653519|G protein-coupled receptor 89A##BC003187|GPR89A|653519|G protein-coupled receptor 89A##DQ890650|GPR89B|51463|G protein-coupled receptor 89B##DQ893830|GPR89A|653519|G protein-coupled receptor 89A##BT006679|GPR89A|653519|G protein-coupled receptor 89A	0.894388	CTCF.p2:-12:0.894
chr22	23884081	23884226	reg1017140.p1	9.246	+	TSC_hg19_v1_chr22_-_23744738 AK056130 AK092581 AX747609 AK092530 AX747585	-139410	-	TSC_hg19_v1_chr22_+_23540316 X14677 X14675	-343748	+	TSC_hg19_v1_chr22_+_23523013 X06418 EU216058 EU216059 EU216061 EU216062 EU216063 EU216064 EU216065 EU216067 EU216068 EU216069 EU216070 EU216072	-361104	+	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	38282	-	BC056888 AL080197 BC063390 AK310349 NM_016449	90343	-	AY101396 NM_153615	148894	+	AK056130|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092581|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092530|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##X06418|BCR|613|breakpoint cluster region##EU216058|BCR|613|breakpoint cluster region##EU216059|BCR|613|breakpoint cluster region##EU216061|BCR|613|breakpoint cluster region##EU216062|BCR|613|breakpoint cluster region##EU216063|BCR|613|breakpoint cluster region##EU216064|BCR|613|breakpoint cluster region##EU216067|BCR|613|breakpoint cluster region##EU216069|BCR|613|breakpoint cluster region##EU216070|BCR|613|breakpoint cluster region##DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43##AY101396|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4##NM_153615|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4	0.010535	
chr3	196983838	196983958	reg1014173.p1	9.245	+	AK294855 NM_001204387 NM_001204388	-72897	-	TSC_hg19_v1_chr3_-_196756689 NM_033316 NM_005929	-227196	-	BT007377 AB527337 M12154 BC093920 BC111947 BC143257 BC002623 BC001875 BC007550 BC053510 BC071910 TSC_hg19_v1_chr3_-_196756658 BC032752	-227275	-	TSC_hg19_v1_chr3_-_197024987 BC015560 BC028486 AK310893	41035	-	BC140841 BC144651 TSC_hg19_v1_chr3_-_197025506 AK304280 NM_001098424 NM_001204386 NM_004087 U13896 U13897 AK310596	41576	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	298944	-	AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_033316|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_005929|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BT007377|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##M12154|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC093920|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC111947|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC143257|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC002623|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC001875|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC007550|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC053510|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC071910|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC032752|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC015560|DLG1|1739|discs, large homolog 1 (Drosophila)##BC028486|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310893|DLG1|1739|discs, large homolog 1 (Drosophila)##BC140841|DLG1|1739|discs, large homolog 1 (Drosophila)##BC144651|DLG1|1739|discs, large homolog 1 (Drosophila)##AK304280|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001098424|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204386|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_004087|DLG1|1739|discs, large homolog 1 (Drosophila)##U13896|DLG1|1739|discs, large homolog 1 (Drosophila)##U13897|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310596|DLG1|1739|discs, large homolog 1 (Drosophila)##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1	0.983273	CTCF.p2:7:0.983
chr5	136965381	136965510	reg1015369.p1	9.244	+	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	-130465	-	TSC_hg19_v1_chr5_-_136834420 AK094489	-131018	-	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	-131204	-	AF208068 AK314707 TSC_hg19_v1_chr5_-_137071541 AB032955	106060	-	AK098190 BC034035 NM_017415 TSC_hg19_v1_chr5_-_137071807	106316	-	TSC_hg19_v1_chr5_-_137088952 BC012490	123511	-	AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AF208068|KLHL3|26249|kelch-like 3 (Drosophila)##AK314707|KLHL3|26249|kelch-like 3 (Drosophila)##AB032955|KLHL3|26249|kelch-like 3 (Drosophila)##BC034035|KLHL3|26249|kelch-like 3 (Drosophila)##NM_017415|KLHL3|26249|kelch-like 3 (Drosophila)##BC012490|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	0.832709	CTCF.p2:-19:0.833
chr1	40904195	40904355	reg1013647.p2	9.243	+	AK316218 NM_001198980 AK298702	-41787	+	AK308280 NM_001198979	-45259	+	NM_001198978 AK303975 AL133206	-63949	+	AK091612 AX747095 AL137241 TSC_hg19_v1_chr1_+_40915792	11525	+	NM_023070	12061	+	TSC_hg19_v1_chr1_+_40942884 BC041873	38607	+	AK316218|SMAP2|64744|small ArfGAP2##NM_001198980|SMAP2|64744|small ArfGAP2##AK298702|SMAP2|64744|small ArfGAP2##AK308280|SMAP2|64744|small ArfGAP2##NM_001198979|SMAP2|64744|small ArfGAP2##NM_001198978|SMAP2|64744|small ArfGAP2##AK303975|SMAP2|64744|small ArfGAP2##AL133206|SMAP2|64744|small ArfGAP2##AK091612|ZNF643|65243|zinc finger protein 643##AL137241|ZNF643|65243|zinc finger protein 643##NM_023070|ZNF643|65243|zinc finger protein 643##BC041873|ZNF642|339559|zinc finger protein 642	0.96895	CTCF.p2:-3:0.969
chr3	103821301	103821414	reg1013286.p2	9.243	+	AY090780 NM_175056 BC143817	-1667490	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-2252983	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-2274397	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	1264223	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	1264465	+	CR749655 TSC_hg19_v1_chr3_-_105421064	1599697	-	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.880067	CTCF.p2:-6:0.880
chr18	24351629	24351751	reg1013797.p2	9.242	+	AF542549 NM_198991	-131383	-	AK289870 BC063652 TSC_hg19_v1_chr18_-_24129261 NM_001136205	-222449	-	NM_001142730 TSC_hg19_v1_chr18_-_24128518	-223180	-	U63623 NM_004028	90864	-	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	94026	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	371189	-	AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1##AK289870|KCTD1|284252|potassium channel tetramerisation domain containing 1##BC063652|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001136205|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1##U63623|AQP4|361|aquaporin 4##NM_004028|AQP4|361|aquaporin 4##AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	0.025791	
chr19	15695589	15695704	reg1014913.p1	9.242	+	NM_173483 AK096820	-76311	+	BC136551 BC136552 BC144238 AF384856 AY358156 TSC_hg19_v1_chr19_-_15590313 AK289415 AB073610 AK055882 NM_052890	-105387	-	AK024488 TSC_hg19_v1_chr19_-_15575356 AK122587 NM_022904	-120279	-	AK300530 AK300539 NM_007253 AK300478 AK096809 AK314685	30383	+	AB002454 AK296761 AK296802 AK298675 AK316136 NM_000896 NM_001199208 NM_001199209 AK304200 BC136299 D12620 D12621	56077	+	NM_023944 AK304138 TSC_hg19_v1_chr19_+_15783896 AK304389 AK075435 AL832171 BC035350 AY358977 AB035130 AB035131	88226	+	NM_173483|CYP4F22|126410|cytochrome P450, family 4, subfamily F, polypeptide 22##AK096820|CYP4F22|126410|cytochrome P450, family 4, subfamily F, polypeptide 22##BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2##BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2##BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2##AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2##AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2##AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2##AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2##AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2##NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2##AK024488|RASAL3|64926|RAS protein activator like 3##AK122587|RASAL3|64926|RAS protein activator like 3##NM_022904|RASAL3|64926|RAS protein activator like 3##AK300530|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK300539|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##NM_007253|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK300478|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK096809|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AK314685|CYP4F8|11283|cytochrome P450, family 4, subfamily F, polypeptide 8##AB002454|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK296761|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK296802|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK298675|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK316136|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_000896|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_001199208|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_001199209|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##AK304200|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##BC136299|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##D12620|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##D12621|CYP4F3|4051|cytochrome P450, family 4, subfamily F, polypeptide 3##NM_023944|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK304138|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK304389|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK075435|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AL832171|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##BC035350|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AY358977|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AB035130|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AB035131|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12	1.051298	CTCF.p2:0:0.990
chr16	89641147	89641283	reg1015990.p1	9.241	+	TSC_hg19_v1_chr16_+_89627089 BC093063 AK026501 AK093246 AK130964 AK290893 AK294655 AK308545 BC066320 D28432 X64707 AK025405 AK127579 AK130963 AK297198 BC007345 BC004954 BC006179 BC063378 BC007805 BC013078 BC014167 BC027463 BC010994 BC000851 BC020804 NM_033251 BC007563	-14108	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	-14150	+	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	-66401	+	TSC_hg19_v1_chr16_+_89642221 AJ133798 NM_014427 NM_153636 BC064577 BC035334 CU690070 AB463543	992	+	NM_001128141	38500	+	AK309577 TSC_hg19_v1_chr16_+_89680058	38793	+	BC093063|RPL13|6137|ribosomal protein L13##AK026501|RPL13|6137|ribosomal protein L13##AK130964|RPL13|6137|ribosomal protein L13##AK290893|RPL13|6137|ribosomal protein L13##AK294655|RPL13|6137|ribosomal protein L13##AK308545|RPL13|6137|ribosomal protein L13##BC066320|RPL13|6137|ribosomal protein L13##D28432|RPL13|6137|ribosomal protein L13##X64707|RPL13|6137|ribosomal protein L13##AK025405|RPL13|6137|ribosomal protein L13##AK127579|RPL13|6137|ribosomal protein L13##AK130963|RPL13|6137|ribosomal protein L13##AK297198|RPL13|6137|ribosomal protein L13##BC007345|RPL13|6137|ribosomal protein L13##BC004954|RPL13|6137|ribosomal protein L13##BC006179|RPL13|6137|ribosomal protein L13##BC063378|RPL13|6137|ribosomal protein L13##BC007805|RPL13|6137|ribosomal protein L13##BC013078|RPL13|6137|ribosomal protein L13##BC014167|RPL13|6137|ribosomal protein L13##BC027463|RPL13|6137|ribosomal protein L13##BC010994|RPL13|6137|ribosomal protein L13##BC000851|RPL13|6137|ribosomal protein L13##BC020804|RPL13|6137|ribosomal protein L13##NM_033251|RPL13|6137|ribosomal protein L13##BC007563|RPL13|6137|ribosomal protein L13##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13##NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##AJ133798|CPNE7|27132|copine VII##NM_014427|CPNE7|27132|copine VII##NM_153636|CPNE7|27132|copine VII##BC064577|CPNE7|27132|copine VII##BC035334|CPNE7|27132|copine VII##NM_001128141|DPEP1|1800|dipeptidase 1 (renal)##AK309577|DPEP1|1800|dipeptidase 1 (renal)	0.083746	
chr17	27696941	27697096	reg1005348.p1	9.241	+	TSC_hg19_v1_chr17_-_27621167 AK293075 NM_020772	-75853	-	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	-75908	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	-123141	+	NM_020791 NM_025142 BC133039 BC144067	20927	+	TSC_hg19_v1_chr17_-_27893539 AK056717	196526	-	TSC_hg19_v1_chr17_-_27894056 BC012476 NM_198147 AY358212	197006	-	AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1##NM_020791|TAOK1|57551|TAO kinase 1##NM_025142|TAOK1|57551|TAO kinase 1##BC133039|TAOK1|57551|TAO kinase 1##BC144067|TAOK1|57551|TAO kinase 1##AK056717|ABHD15|116236|abhydrolase domain containing 15##BC012476|ABHD15|116236|abhydrolase domain containing 15##NM_198147|ABHD15|116236|abhydrolase domain containing 15##AY358212|ABHD15|116236|abhydrolase domain containing 15	0.96544	CTCF.p2:-18:0.965
chr6	152873855	152873980	reg1014112.p1	9.241	+	AK056122 TSC_hg19_v1_chr6_-_152702456 BC039121	-171443	-	TSC_hg19_v1_chr6_-_152702331 BX537517	-171576	-	TSC_hg19_v1_chr6_-_152623240 AK310977	-250666	-	AF535142 NM_033071 TSC_hg19_v1_chr6_-_152958011	84125	-	AF495910 NM_182961	84616	-	NM_025107 AF527367 AK024922 BC128463 BC128464 GU997693 AK021612 BC022556 AL834500 CU692694	145188	+	AK056122|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##BC039121|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##BX537517|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AK310977|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_025107|MYCT1|80177|myc target 1##AF527367|MYCT1|80177|myc target 1##AK024922|MYCT1|80177|myc target 1##BC128463|MYCT1|80177|myc target 1##BC128464|MYCT1|80177|myc target 1##GU997693|MYCT1|80177|myc target 1##AK021612|MYCT1|80177|myc target 1##BC022556|MYCT1|80177|myc target 1##AL834500|MYCT1|80177|myc target 1	0.211783	CTCF.p2:0:0.212
chr1	199432776	199432911	reg1015177.p1	9.240	+	TSC_hg19_v1_chr1_-_198906559 EF413001	-526296	-	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-824513	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-824618	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	564026	+	AK316513 TSC_hg19_v1_chr1_+_200011716	578881	+	NM_001105517	749812	+	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene	0.290356	CTCF.p2:8:0.290
chr14	22965721	22965864	reg1015788.p1	9.240	+	AB463964 NM_001001912 AY726598	-832470	+	NM_001005466 AB529274 BC137371 BC137382	-862746	-	AB528817 NM_001005465	-926918	-	X58763 TSC_hg19_v1_chr14_+_22989364	23557	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	92294	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	92342	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.111844	
chr9	106160303	106160404	reg1013723.p1	9.240	+	BC058038 NM_001340 AK313349 BC114547 Z46788	-402726	+	AB075853 BC167432 NM_133445 TSC_hg19_v1_chr9_-_104500930	-1659452	-	TSC_hg19_v1_chr9_-_104500218 AB385519 AF416558 AJ416950	-1660108	-	TSC_hg19_v1_chr9_+_106856601 AL833191 NM_001042551 NM_006444 BC055081 BC061906 AK307752 AK292599 BC017845 AF092563	696218	+	TSC_hg19_v1_chr9_+_106856625 AY739716 BC130385 BC144163	696300	+	TSC_hg19_v1_chr9_+_106856844 BC071750 NM_001042550 AK001485 BC032705 BC107891	696519	+	BC058038|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##NM_001340|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##AK313349|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##BC114547|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##Z46788|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##AB075853|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##BC167432|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##NM_133445|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AF416558|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AJ416950|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AL833191|SMC2|10592|structural maintenance of chromosomes 2##NM_001042551|SMC2|10592|structural maintenance of chromosomes 2##NM_006444|SMC2|10592|structural maintenance of chromosomes 2##BC055081|SMC2|10592|structural maintenance of chromosomes 2##BC061906|SMC2|10592|structural maintenance of chromosomes 2##AK307752|SMC2|10592|structural maintenance of chromosomes 2##AK292599|SMC2|10592|structural maintenance of chromosomes 2##BC017845|SMC2|10592|structural maintenance of chromosomes 2##AF092563|SMC2|10592|structural maintenance of chromosomes 2##AY739716|SMC2|10592|structural maintenance of chromosomes 2##BC130385|SMC2|10592|structural maintenance of chromosomes 2##BC144163|SMC2|10592|structural maintenance of chromosomes 2##BC071750|SMC2|10592|structural maintenance of chromosomes 2##NM_001042550|SMC2|10592|structural maintenance of chromosomes 2##AK001485|SMC2|10592|structural maintenance of chromosomes 2##BC032705|SMC2|10592|structural maintenance of chromosomes 2##BC107891|SMC2|10592|structural maintenance of chromosomes 2	0.835909	CTCF.p2:2:0.817
chr6	12234372	12234503	reg1013419.p2	9.239	+	NM_002114	-221714	+	NM_001143948 NM_032744	-455158	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-695939	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	56156	+	TSC_hg19_v1_chr6_+_12514301 D28417	279865	+	AK295263 TSC_hg19_v1_chr6_+_12716998	482506	+	NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1	0.592853	CTCF.p2:-17:0.557
chr8	121880996	121881131	reg1012804.p1	9.238	+	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-56557	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-56793	-	TSC_hg19_v1_chr8_-_121824090 AB590740	-57000	-	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	772563	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	1912848	+	BC042145 TSC_hg19_v1_chr8_+_123794000	1912931	+	NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2	0.024581	
chr19	12313234	12313354	reg1013442.p1	9.237	+	TSC_hg19_v1_chr19_+_12305871 AK093188 AX721123	-7388	+	AK023304 TSC_hg19_v1_chr19_+_12305836	-7461	+	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	-39385	+	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	92358	-	AK313755 BC022523 AK092116 AX747362 NM_145276	131190	-	AK024418 AK295923 NM_030824	163166	-	AK023304|LOC100289333|100289333|uncharacterized LOC100289333##NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136##BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44##AK313755|ZNF563|147837|zinc finger protein 563##BC022523|ZNF563|147837|zinc finger protein 563##AK092116|ZNF563|147837|zinc finger protein 563##NM_145276|ZNF563|147837|zinc finger protein 563##AK024418|ZNF442|79973|zinc finger protein 442##AK295923|ZNF442|79973|zinc finger protein 442##NM_030824|ZNF442|79973|zinc finger protein 442	0.734752	CTCF.p2:-9:0.667
chr5	86696278	86696390	reg1012362.p1	9.237	+	AK021812 TSC_hg19_v1_chr5_+_86676755	-19647	+	TSC_hg19_v1_chr5_+_86564758 NM_022650 AK300269 BC070063 BC020761 BC107870 AK312739 AK300263 AK300406 M23612 BC054891	-131581	+	TSC_hg19_v1_chr5_+_86564238 CU689592	-132081	+	TSC_hg19_v1_chr5_-_86703928 AK094534	7627	-	CU675079 CU677687 CU692576 AB590163 CR407658 DQ892550 DQ895761 U12685 TSC_hg19_v1_chr5_-_86708717 U11791 BC022351 BC016823 BC016705 AK291720 BC005280 BX537673 NM_001199189	12331	-	TSC_hg19_v1_chr5_-_86708756 NM_001239	12468	-	NM_022650|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AK300269|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC070063|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC020761|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC107870|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AK312739|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AK300263|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AK300406|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##M23612|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC054891|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AK094534|CCNH|902|cyclin H##CR407658|CCNH|902|cyclin H##DQ892550|CCNH|902|cyclin H##DQ895761|CCNH|902|cyclin H##U12685|CCNH|902|cyclin H##U11791|CCNH|902|cyclin H##BC022351|CCNH|902|cyclin H##BC016823|CCNH|902|cyclin H##BC016705|CCNH|902|cyclin H##AK291720|CCNH|902|cyclin H##BC005280|CCNH|902|cyclin H##BX537673|CCNH|902|cyclin H##NM_001199189|CCNH|902|cyclin H##NM_001239|CCNH|902|cyclin H	0.907856	CTCF.p2:6:0.908
chr2	99795704	99795853	reg1015077.p1	9.236	+	TSC_hg19_v1_chr2_+_99771541 NM_001204830	-24233	+	AB017566 NM_015929 NM_145197 NM_145198 NM_145199 TSC_hg19_v1_chr2_+_99771493 BC070145 AF151083 BC009772 BC007001	-24321	+	NM_025244	-24592	-	AL161992 TSC_hg19_v1_chr2_-_99797496 BC018453 NM_138798 AK311658	1683	-	TSC_hg19_v1_chr2_+_99797614 NM_145212 BC022391 AK025547	1802	+	TSC_hg19_v1_chr2_+_99797646 AK225894 BC000217	1882	+	NM_001204830|LIPT1|51601|lipoyltransferase 1##AB017566|LIPT1|51601|lipoyltransferase 1##NM_015929|LIPT1|51601|lipoyltransferase 1##NM_145197|LIPT1|51601|lipoyltransferase 1##NM_145198|LIPT1|51601|lipoyltransferase 1##NM_145199|LIPT1|51601|lipoyltransferase 1##BC070145|LIPT1|51601|lipoyltransferase 1##BC009772|LIPT1|51601|lipoyltransferase 1##BC007001|LIPT1|51601|lipoyltransferase 1##NM_025244|TSGA10|80705|testis specific, 10##AL161992|MITD1|129531|MIT, microtubule interacting and transport, domain containing 1##BC018453|MITD1|129531|MIT, microtubule interacting and transport, domain containing 1##NM_138798|MITD1|129531|MIT, microtubule interacting and transport, domain containing 1##NM_145212|MRPL30|51263|mitochondrial ribosomal protein L30##BC022391|MRPL30|51263|mitochondrial ribosomal protein L30##AK025547|MRPL30|51263|mitochondrial ribosomal protein L30##AK225894|MRPL30|51263|mitochondrial ribosomal protein L30##BC000217|MRPL30|51263|mitochondrial ribosomal protein L30	0.813653	CTCF.p2:25:0.814
chr6	100555443	100555583	reg1013529.p2	9.236	+	AK123634 NM_001040179 NM_032503 AF347063	-113403	-	AY004253 NM_021620	-500864	+	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	-538910	-	NM_005068 U70212	356037	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	773587	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	773703	-	AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.0	
chr11	66246511	66246634	reg1014933.p1	9.235	+	TSC_hg19_v1_chr11_+_66234371 NM_001098510 NM_001243136 NM_145065 AL834395 BC021256 AK074201 BC025723	-12219	+	TSC_hg19_v1_chr11_-_66234176 AK127603	-12380	-	AK094060 AX748433 NM_001243135	-12775	+	TSC_hg19_v1_chr11_+_66247882 AL833475 NM_005700 NM_130443 BC007221	1318	+	TSC_hg19_v1_chr11_+_66247908 AK021449 AK222847 AK297199 AK222566 AK304581 BC014038 BC001446	1342	+	AK095638 TSC_hg19_v1_chr11_+_66278105 BX647612 AK294962 AK302657 AK296311 BC047642 AF503941 NM_024649 BC109064 BC109065	31544	+	NM_001098510|PELI3|246330|pellino homolog 3 (Drosophila)##NM_001243136|PELI3|246330|pellino homolog 3 (Drosophila)##NM_145065|PELI3|246330|pellino homolog 3 (Drosophila)##AL834395|PELI3|246330|pellino homolog 3 (Drosophila)##BC021256|PELI3|246330|pellino homolog 3 (Drosophila)##AK074201|PELI3|246330|pellino homolog 3 (Drosophila)##BC025723|PELI3|246330|pellino homolog 3 (Drosophila)##AK127603|MRPL11|65003|mitochondrial ribosomal protein L11##AK094060|PELI3|246330|pellino homolog 3 (Drosophila)##NM_001243135|PELI3|246330|pellino homolog 3 (Drosophila)##AL833475|DPP3|10072|dipeptidyl-peptidase 3##NM_005700|DPP3|10072|dipeptidyl-peptidase 3##NM_130443|DPP3|10072|dipeptidyl-peptidase 3##BC007221|DPP3|10072|dipeptidyl-peptidase 3##AK021449|DPP3|10072|dipeptidyl-peptidase 3##AK222847|DPP3|10072|dipeptidyl-peptidase 3##AK297199|DPP3|10072|dipeptidyl-peptidase 3##AK222566|DPP3|10072|dipeptidyl-peptidase 3##AK304581|DPP3|10072|dipeptidyl-peptidase 3##BC014038|DPP3|10072|dipeptidyl-peptidase 3##BC001446|DPP3|10072|dipeptidyl-peptidase 3##AK095638|BBS1|582|Bardet-Biedl syndrome 1##BX647612|BBS1|582|Bardet-Biedl syndrome 1##AK294962|BBS1|582|Bardet-Biedl syndrome 1##AK302657|BBS1|582|Bardet-Biedl syndrome 1##AK296311|BBS1|582|Bardet-Biedl syndrome 1##BC047642|BBS1|582|Bardet-Biedl syndrome 1##AF503941|BBS1|582|Bardet-Biedl syndrome 1##NM_024649|BBS1|582|Bardet-Biedl syndrome 1##BC109064|BBS1|582|Bardet-Biedl syndrome 1##BC109065|BBS1|582|Bardet-Biedl syndrome 1	0.996993	CTCF.p2:9:0.997
chr20	5429256	5429365	reg1012655.p1	9.235	+	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-134274	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-321615	+	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	-321788	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	162277	-	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	301756	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	462816	+	AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)	0.998466	CTCF.p2:12:0.998
chr21	19297455	19297581	reg1013409.p1	9.235	+	AF523314 AF523315 NM_001204175 NM_001204176 NM_001204177 NM_001204178 AF523313	-7862	+	TSC_hg19_v1_chr21_-_19191674 AF239726 AK023825 AK225123 AK314471 CR749496 NM_001100420 NM_001100421 NM_017447	-105838	-	TSC_hg19_v1_chr21_-_18985237 NM_001130914 NM_006806	-312251	-	TSC_hg19_v1_chr21_+_19617149 AF257472 NM_024944 AY358608 BC009418	319644	+	AK296009 NM_001204174	320673	+	BC111749 NM_002772 U09860	478447	-	AF523314|CHODL|140578|chondrolectin##AF523315|CHODL|140578|chondrolectin##NM_001204175|CHODL|140578|chondrolectin##NM_001204176|CHODL|140578|chondrolectin##NM_001204177|CHODL|140578|chondrolectin##NM_001204178|CHODL|140578|chondrolectin##AF523313|CHODL|140578|chondrolectin##AF239726|C21orf91|54149|chromosome 21 open reading frame 91##AK023825|C21orf91|54149|chromosome 21 open reading frame 91##AK225123|C21orf91|54149|chromosome 21 open reading frame 91##AK314471|C21orf91|54149|chromosome 21 open reading frame 91##CR749496|C21orf91|54149|chromosome 21 open reading frame 91##NM_001100420|C21orf91|54149|chromosome 21 open reading frame 91##NM_001100421|C21orf91|54149|chromosome 21 open reading frame 91##NM_017447|C21orf91|54149|chromosome 21 open reading frame 91##NM_001130914|BTG3|10950|BTG family, member 3##NM_006806|BTG3|10950|BTG family, member 3##AF257472|CHODL|140578|chondrolectin##NM_024944|CHODL|140578|chondrolectin##AY358608|CHODL|140578|chondrolectin##BC009418|CHODL|140578|chondrolectin##AK296009|CHODL|140578|chondrolectin##NM_001204174|CHODL|140578|chondrolectin##BC111749|TMPRSS15|5651|transmembrane protease, serine 15##NM_002772|TMPRSS15|5651|transmembrane protease, serine 15##U09860|TMPRSS15|5651|transmembrane protease, serine 15	0.60506	CTCF.p2:0:0.605
chrX	51384503	51384631	reg1014637.p1	9.235	+	BC009942 TSC_hg19_v1_chrX_-_51239444 NM_018159	-145125	-	AB528198 AM392606 AK001490 TSC_hg19_v1_chrX_-_51239368	-145235	-	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	-308864	+	TSC_hg19_v1_chrX_+_51486493 NM_018094 AK225671 BC036077 AK298868 AK023155 AK001303	101944	+	NM_001005332 TSC_hg19_v1_chrX_+_51546171	161597	+	TSC_hg19_v1_chrX_+_51636723 NM_001005333 NM_006986 AF258554 AK298574 AK308706 BC014070 AK314053 AK074092 AF217963 AF300328	252136	+	BC009942|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018159|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AM392606|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK001490|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_018094|GSPT2|23708|G1 to S phase transition 2##BC036077|GSPT2|23708|G1 to S phase transition 2##AK298868|GSPT2|23708|G1 to S phase transition 2##AK023155|GSPT2|23708|G1 to S phase transition 2##AK001303|GSPT2|23708|G1 to S phase transition 2##NM_001005332|MAGED1|9500|melanoma antigen family D, 1##NM_001005333|MAGED1|9500|melanoma antigen family D, 1##NM_006986|MAGED1|9500|melanoma antigen family D, 1##AF258554|MAGED1|9500|melanoma antigen family D, 1##AK298574|MAGED1|9500|melanoma antigen family D, 1##AK308706|MAGED1|9500|melanoma antigen family D, 1##BC014070|MAGED1|9500|melanoma antigen family D, 1##AK314053|MAGED1|9500|melanoma antigen family D, 1##AK074092|MAGED1|9500|melanoma antigen family D, 1##AF217963|MAGED1|9500|melanoma antigen family D, 1##AF300328|MAGED1|9500|melanoma antigen family D, 1	0.702594	CTCF.p2:-21:0.703
chr12	6978669	6978812	reg1016416.p1	9.234	+	BC015100 BC070129 D28460 TSC_hg19_v1_chr12_+_6976694 AK129488 AK300661 AK313282 BC007086 BC017917 AK222638 BC009329 BC011611 BC007812 AB590181 DQ893249 DQ896578 CR541702	-2028	+	NM_001159287 TSC_hg19_v1_chr12_+_6976693 NM_000365	-2102	+	TSC_hg19_v1_chr12_+_6961334 U35116 CU678786 AB384820 DQ893030 DQ896274	-17411	+	BC071933 NM_001146316 BC002983 AK297963 AK310353 NM_032641	3744	-	AK292367 NM_001135217 NM_006992 NM_201650 U72508 U72509 U72510 BC014450 AK292291 AK223535	35276	+	AK290525 NM_001975 TSC_hg19_v1_chr12_+_7023743 AK312402 AK295220 BC002745 M22349	44885	+	BC015100|TPI1|7167|triosephosphate isomerase 1##BC070129|TPI1|7167|triosephosphate isomerase 1##D28460|TPI1|7167|triosephosphate isomerase 1##AK129488|TPI1|7167|triosephosphate isomerase 1##AK300661|TPI1|7167|triosephosphate isomerase 1##AK313282|TPI1|7167|triosephosphate isomerase 1##BC007086|TPI1|7167|triosephosphate isomerase 1##BC017917|TPI1|7167|triosephosphate isomerase 1##AK222638|TPI1|7167|triosephosphate isomerase 1##BC009329|TPI1|7167|triosephosphate isomerase 1##BC011611|TPI1|7167|triosephosphate isomerase 1##BC007812|TPI1|7167|triosephosphate isomerase 1##DQ893249|TPI1|7167|triosephosphate isomerase 1##DQ896578|TPI1|7167|triosephosphate isomerase 1##CR541702|TPI1|7167|triosephosphate isomerase 1##NM_001159287|TPI1|7167|triosephosphate isomerase 1##NM_000365|TPI1|7167|triosephosphate isomerase 1##U35116|USP5|8078|ubiquitin specific peptidase 5 (isopeptidase T)##DQ893030|USP5|8078|ubiquitin specific peptidase 5 (isopeptidase T)##DQ896274|USP5|8078|ubiquitin specific peptidase 5 (isopeptidase T)##BC071933|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##NM_001146316|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##BC002983|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##AK297963|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##AK310353|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##NM_032641|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##AK292367|LRRC23|10233|leucine rich repeat containing 23##NM_001135217|LRRC23|10233|leucine rich repeat containing 23##NM_006992|LRRC23|10233|leucine rich repeat containing 23##NM_201650|LRRC23|10233|leucine rich repeat containing 23##U72508|LRRC23|10233|leucine rich repeat containing 23##U72509|LRRC23|10233|leucine rich repeat containing 23##U72510|LRRC23|10233|leucine rich repeat containing 23##BC014450|LRRC23|10233|leucine rich repeat containing 23##AK292291|LRRC23|10233|leucine rich repeat containing 23##AK223535|LRRC23|10233|leucine rich repeat containing 23##AK290525|ENO2|2026|enolase 2 (gamma, neuronal)##NM_001975|ENO2|2026|enolase 2 (gamma, neuronal)##AK312402|ENO2|2026|enolase 2 (gamma, neuronal)##AK295220|ENO2|2026|enolase 2 (gamma, neuronal)##BC002745|ENO2|2026|enolase 2 (gamma, neuronal)##M22349|ENO2|2026|enolase 2 (gamma, neuronal)	0.999824	CTCF.p2:15:1.000
chr1	47644917	47645063	reg1015570.p1	9.234	+	TSC_hg19_v1_chr1_+_47603114 BC148248 AY280371 NM_001010969 BC142690 BC142607 AY280372	-41868	+	AY358631 AK292175 AY262056 NM_178134 AB527374	-111886	+	BC028102 NM_178033 AK098065 AY358537 AM040940 DQ891655 DQ891656 DQ894843 EU176287 CU688398	-155627	+	CR450304 CU680280 BC012303 TSC_hg19_v1_chr1_-_47655693	10658	-	TSC_hg19_v1_chr1_-_47655728 NM_005764	10756	-	M61108 NM_003189	50452	-	BC148248|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280371|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##NM_001010969|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142690|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142607|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280372|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY358631|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##AK292175|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##AY262056|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##NM_178134|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##BC028102|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##NM_178033|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AK098065|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AY358537|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AM040940|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891655|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891656|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ894843|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##EU176287|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##CR450304|PDZK1IP1|10158|PDZK1 interacting protein 1##BC012303|PDZK1IP1|10158|PDZK1 interacting protein 1##NM_005764|PDZK1IP1|10158|PDZK1 interacting protein 1##M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1##NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1	0.998673	CTCF.p2:0:0.999
chr15	102307321	102307467	reg1012841.p1	9.234	+	TSC_hg19_v1_chr15_-_102264638 BC132671 BC136315 BC143943 AK056653 AX721055 NM_152334	-42739	-	TSC_hg19_v1_chr15_-_102192580 BC006150 BC008873 AF353992 AK315584 AK297048 AK026257 AK296553 NM_025141 NM_078474	-114928	-	TSC_hg19_v1_chr15_-_102030140 NM_002570 NM_138319 NM_138320 NM_138321 NM_138322 NM_138323 NM_138324 NM_138325	-277232	-	BC137002 BC137003 NM_001005326	38517	+	BC137064 BC137065 NM_001001674	50983	+	AY792621 NM_001195021	74927	+	BC132671|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC136315|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC143943|TARSL2|123283|threonyl-tRNA synthetase-like 2##AK056653|TARSL2|123283|threonyl-tRNA synthetase-like 2##NM_152334|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC006150|TM2D3|80213|TM2 domain containing 3##BC008873|TM2D3|80213|TM2 domain containing 3##AF353992|TM2D3|80213|TM2 domain containing 3##AK315584|TM2D3|80213|TM2 domain containing 3##AK297048|TM2D3|80213|TM2 domain containing 3##AK026257|TM2D3|80213|TM2 domain containing 3##AK296553|TM2D3|80213|TM2 domain containing 3##NM_025141|TM2D3|80213|TM2 domain containing 3##NM_078474|TM2D3|80213|TM2 domain containing 3##NM_002570|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138319|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138320|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138321|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138322|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138323|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138324|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138325|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137064|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##BC137065|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##NM_001001674|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##AY792621|GPCRLTM7|100272148|putative olfactory receptor GPCRLTM7##NM_001195021|GPCRLTM7|100272148|putative olfactory receptor GPCRLTM7	1.335629	CTCF.p2:8:1.000	CTCF.p2:104:0.242
chr1	12042161	12042281	reg1013957.p1	9.233	+	TSC_hg19_v1_chr1_+_12040505 BC017061	-1709	+	TSC_hg19_v1_chr1_+_12040500 AK295890	-1732	+	NM_001127660 NM_014874 AK289828 TSC_hg19_v1_chr1_+_12040394 AF036536 AK021947 D86987	-1888	+	FJ618905 NM_021933	37077	+	AK022500 TSC_hg19_v1_chr1_+_12079535	37313	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	37349	+	BC017061|MFN2|9927|mitofusin 2##AK295890|MFN2|9927|mitofusin 2##NM_001127660|MFN2|9927|mitofusin 2##NM_014874|MFN2|9927|mitofusin 2##AK289828|MFN2|9927|mitofusin 2##AF036536|MFN2|9927|mitofusin 2##AK021947|MFN2|9927|mitofusin 2##D86987|MFN2|9927|mitofusin 2##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein	0.017331	
chr1	33399158	33399276	reg1012084.p1	9.233	+	AY359883 TSC_hg19_v1_chr1_-_33366959 AY027543 BC020497 BC001418 BC013953 NM_033504 BC023260	-32283	-	TSC_hg19_v1_chr1_+_33352097 DQ426877 AK313907 BC001777 NM_002143	-47133	+	BC062297 NM_001171941	-61136	-	NM_001127361 NM_153341 TSC_hg19_v1_chr1_-_33430415 AK131439	31179	-	AB451267 AB451394 AY080900 U54645 BC009405 AK307731 TSC_hg19_v1_chr1_-_33502450 AK295105 AK296863 BC026705 AK291676 AK297036	103222	-	TSC_hg19_v1_chr1_-_33502463 BC070127 BC090040 U84371 U39945 AY080899	103240	-	AY359883|TMEM54|113452|transmembrane protein 54##AY027543|TMEM54|113452|transmembrane protein 54##BC020497|TMEM54|113452|transmembrane protein 54##BC001418|TMEM54|113452|transmembrane protein 54##BC013953|TMEM54|113452|transmembrane protein 54##NM_033504|TMEM54|113452|transmembrane protein 54##BC023260|TMEM54|113452|transmembrane protein 54##DQ426877|HPCA|3208|hippocalcin##AK313907|HPCA|3208|hippocalcin##BC001777|HPCA|3208|hippocalcin##NM_002143|HPCA|3208|hippocalcin##BC062297|FNDC5|252995|fibronectin type III domain containing 5##NM_001171941|FNDC5|252995|fibronectin type III domain containing 5##NM_001127361|RNF19B|127544|ring finger protein 19B##NM_153341|RNF19B|127544|ring finger protein 19B##AK131439|RNF19B|127544|ring finger protein 19B##AB451267|AK2|204|adenylate kinase 2##AB451394|AK2|204|adenylate kinase 2##AY080900|AK2|204|adenylate kinase 2##U54645|AK2|204|adenylate kinase 2##BC009405|AK2|204|adenylate kinase 2##AK307731|AK2|204|adenylate kinase 2##AK295105|AK2|204|adenylate kinase 2##AK296863|AK2|204|adenylate kinase 2##BC026705|AK2|204|adenylate kinase 2##AK291676|AK2|204|adenylate kinase 2##AK297036|AK2|204|adenylate kinase 2##BC070127|AK2|204|adenylate kinase 2##BC090040|AK2|204|adenylate kinase 2##U84371|AK2|204|adenylate kinase 2##U39945|AK2|204|adenylate kinase 2##AY080899|AK2|204|adenylate kinase 2	0.72629	CTCF.p2:-17:0.726
chr17	80626546	80626655	reg1012156.p1	9.232	+	TSC_hg19_v1_chr17_-_80606321 AK297477 BC000974 AM182326 AB464355 BC007838 NM_019613	-20317	-	TSC_hg19_v1_chr17_+_80477607 NM_004514	-149010	+	TSC_hg19_v1_chr17_+_80416616 BC016440 CU674220 CU677625	-209958	+	TSC_hg19_v1_chr17_-_80656575 BC035814 U05227 AB209711 BC018039 NM_006822	29934	-	TSC_hg19_v1_chr17_+_80674622 NM_024619 AK293523 AK301958 AK315373 BC007611 AK022233 AL136631 AY360465 BC014408 AB385548 CU676977 CR533461	48006	+	TSC_hg19_v1_chr17_+_80693490 NM_022158 AK294871 BC042680 AJ404615 CU692116	66862	+	AK297477|WDR45L|56270|WDR45-like##BC000974|WDR45L|56270|WDR45-like##AM182326|WDR45L|56270|WDR45-like##BC007838|WDR45L|56270|WDR45-like##NM_019613|WDR45L|56270|WDR45-like##NM_004514|FOXK2|3607|forkhead box K2##BC016440|NARF|26502|nuclear prelamin A recognition factor##BC035814|RAB40B|10966|RAB40B, member RAS oncogene family##U05227|RAB40B|10966|RAB40B, member RAS oncogene family##AB209711|RAB40B|10966|RAB40B, member RAS oncogene family##BC018039|RAB40B|10966|RAB40B, member RAS oncogene family##NM_006822|RAB40B|10966|RAB40B, member RAS oncogene family##NM_024619|FN3KRP|79672|fructosamine 3 kinase related protein##AK293523|FN3KRP|79672|fructosamine 3 kinase related protein##AK301958|FN3KRP|79672|fructosamine 3 kinase related protein##AK315373|FN3KRP|79672|fructosamine 3 kinase related protein##BC007611|FN3KRP|79672|fructosamine 3 kinase related protein##AK022233|FN3KRP|79672|fructosamine 3 kinase related protein##AL136631|FN3KRP|79672|fructosamine 3 kinase related protein##AY360465|FN3KRP|79672|fructosamine 3 kinase related protein##BC014408|FN3KRP|79672|fructosamine 3 kinase related protein##CR533461|FN3KRP|79672|fructosamine 3 kinase related protein##NM_022158|FN3K|64122|fructosamine 3 kinase##AK294871|FN3K|64122|fructosamine 3 kinase##BC042680|FN3K|64122|fructosamine 3 kinase##AJ404615|FN3K|64122|fructosamine 3 kinase	0.926357	CTCF.p2:-8:0.926
chr11	59448156	59448267	reg1014175.p1	9.231	+	TSC_hg19_v1_chr11_-_59436490 NM_152716	-11704	-	AM392959 AB527197 TSC_hg19_v1_chr11_-_59436483 AL831992 AK127943	-11786	-	AF185696 M86917 NM_002556	-64595	-	NM_001005324 AB529286	33106	-	AK125660 NM_001178040 NM_004177	74320	+	TSC_hg19_v1_chr11_+_59522849 AK293494 BC007405 BC007429	74636	+	NM_152716|PATL1|219988|protein associated with topoisomerase II homolog 1 (yeast)##AM392959|PATL1|219988|protein associated with topoisomerase II homolog 1 (yeast)##AL831992|PATL1|219988|protein associated with topoisomerase II homolog 1 (yeast)##AK127943|PATL1|219988|protein associated with topoisomerase II homolog 1 (yeast)##AF185696|OSBP|5007|oxysterol binding protein##M86917|OSBP|5007|oxysterol binding protein##NM_002556|OSBP|5007|oxysterol binding protein##NM_001005324|OR10V1|390201|olfactory receptor, family 10, subfamily V, member 1##AK125660|STX3|6809|syntaxin 3##NM_001178040|STX3|6809|syntaxin 3##NM_004177|STX3|6809|syntaxin 3##AK293494|STX3|6809|syntaxin 3##BC007405|STX3|6809|syntaxin 3##BC007429|STX3|6809|syntaxin 3	0.02923	
chr14	91893713	91893866	reg1016637.p1	9.230	+	TSC_hg19_v1_chr14_-_91884165 NM_001080414	-9614	-	TSC_hg19_v1_chr14_-_91884159 AF070587	-9641	-	BC098567 NM_003485	-173595	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	82711	-	TSC_hg19_v1_chr14_-_91976644 NM_032560	82848	-	TSC_hg19_v1_chr14_-_91976823 AK000714 BC038932 BC022778	83018	-	NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##NM_032560|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AK000714|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##BC038932|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##BC022778|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.899685	CTCF.p2:-13:0.900
chr18	32606525	32606638	reg1013658.p1	9.228	+	NM_001143827 AK294833 TSC_hg19_v1_chr18_+_32558384	-48281	+	NM_001143826 TSC_hg19_v1_chr18_+_32557008	-49622	+	FJ535564 FJ535565 NM_001198942 NM_001198944 NM_032980 NM_032981 AK295732 U46746 AK295789 U26743 AK315215	-208263	+	TSC_hg19_v1_chr18_+_32621374 NM_014268 AK090945 AX746696 AK315766 BC007318 AB016823 AB528177 AM393705 BT020086 CR536545 CU675609 DQ892923 DQ896172 AK296251	14875	+	TSC_hg19_v1_chr18_+_32821018 NM_001135178 NM_032347 AF533250 AY157641 AK311533 AK027384 BC006172	214465	+	TSC_hg19_v1_chr18_-_32870201 AX721137 AK131291 AK128697 AY234408 AK303447 NM_001112734 NM_001166012	263591	-	NM_001143827|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK294833|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##FJ535564|DTNA|1837|dystrobrevin, alpha##FJ535565|DTNA|1837|dystrobrevin, alpha##NM_001198942|DTNA|1837|dystrobrevin, alpha##NM_001198944|DTNA|1837|dystrobrevin, alpha##NM_032980|DTNA|1837|dystrobrevin, alpha##NM_032981|DTNA|1837|dystrobrevin, alpha##AK295732|DTNA|1837|dystrobrevin, alpha##U46746|DTNA|1837|dystrobrevin, alpha##AK295789|DTNA|1837|dystrobrevin, alpha##U26743|DTNA|1837|dystrobrevin, alpha##AK315215|DTNA|1837|dystrobrevin, alpha##NM_014268|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK090945|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK315766|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##BC007318|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AB016823|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AM393705|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##BT020086|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##CR536545|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##DQ892923|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##DQ896172|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK296251|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001135178|ZNF397|84307|zinc finger protein 397##NM_032347|ZNF397|84307|zinc finger protein 397##AF533250|ZNF397|84307|zinc finger protein 397##AY157641|ZNF397|84307|zinc finger protein 397##AK311533|ZNF397|84307|zinc finger protein 397##AK027384|ZNF397|84307|zinc finger protein 397##BC006172|ZNF397|84307|zinc finger protein 397##AK131291|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK128697|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AY234408|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK303447|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##NM_001112734|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##NM_001166012|ZSCAN30|100101467|zinc finger and SCAN domain containing 30	0.0	
chr3	152189887	152189997	reg1013045.p1	9.228	+	AY358260 NM_001123228	-131164	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-172749	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	-202597	-	NM_002563 Z49205	362793	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	690084	+	TSC_hg19_v1_chr3_+_152880058 BC012362	690106	+	AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family	0.873572	CTCF.p2:-8:0.874
chr4	677869	678006	reg1013955.p2	9.228	+	L03785 NM_002477	-6227	+	TSC_hg19_v1_chr4_+_668354 BC040050	-9601	+	TSC_hg19_v1_chr4_+_668293 AK125529	-9662	+	CU688866 AY358401 TSC_hg19_v1_chr4_-_682941	4992	-	TSC_hg19_v1_chr4_-_682967 BC030246 NM_032219 AK025922	5088	-	TSC_hg19_v1_chr4_-_683107 AK292010	5179	-	L03785|MYL5|4636|myosin, light chain 5, regulatory##NM_002477|MYL5|4636|myosin, light chain 5, regulatory##BC040050|MYL5|4636|myosin, light chain 5, regulatory##AK125529|MYL5|4636|myosin, light chain 5, regulatory##AY358401|MFSD7|84179|major facilitator superfamily domain containing 7##BC030246|MFSD7|84179|major facilitator superfamily domain containing 7##NM_032219|MFSD7|84179|major facilitator superfamily domain containing 7##AK025922|MFSD7|84179|major facilitator superfamily domain containing 7##AK292010|MFSD7|84179|major facilitator superfamily domain containing 7	0.98922	CTCF.p2:3:0.989
chr10	21309622	21309754	reg1016256.p1	9.227	+	NM_006393 Y16241	-123158	-	TSC_hg19_v1_chr10_+_20105360 AK304591 AY358486 NM_032812	-1204315	+	TSC_hg19_v1_chr10_+_18948359 NM_178815 BC024163 AK027275 AF494061 DQ893166 DQ896464	-2361267	+	BC140744 BC144447 NM_001010896 NM_001177483	125799	-	AB209311 TSC_hg19_v1_chr10_-_21462987	153299	-	TSC_hg19_v1_chr10_-_21463021 BC126132 BC126134 BC144201 AJ580772 NM_001173484 NM_213569	153379	-	NM_006393|NEBL|10529|nebulette##Y16241|NEBL|10529|nebulette##AK304591|PLXDC2|84898|plexin domain containing 2##AY358486|PLXDC2|84898|plexin domain containing 2##NM_032812|PLXDC2|84898|plexin domain containing 2##NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B##BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B##AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B##AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113##AB209311|NEBL|10529|nebulette##BC126132|NEBL|10529|nebulette##BC126134|NEBL|10529|nebulette##BC144201|NEBL|10529|nebulette##AJ580772|NEBL|10529|nebulette##NM_001173484|NEBL|10529|nebulette##NM_213569|NEBL|10529|nebulette	0.809619	CTCF.p2:15:0.810
chr4	48318177	48318315	reg1014225.p1	9.227	+	BC101711 BC101713 BC143487 NM_003215 TSC_hg19_v1_chr4_-_48271858	-46411	-	BC017829 L27071 NM_003328	-181988	-	TSC_hg19_v1_chr4_+_48018788 BC067881 CR749484 NM_207330 AK095299	-299443	+	BC040993 TSC_hg19_v1_chr4_+_48343485 AK291006	25165	+	TSC_hg19_v1_chr4_+_48343571 BC006139 BC007701 BC012067 NM_020846 AB040891	25367	+	TSC_hg19_v1_chr4_+_48485353 AK126542 NM_152679 BC019066 BC012048 DQ892628 EU176704 AY704414	167181	+	BC101711|TEC|7006|tec protein tyrosine kinase##BC101713|TEC|7006|tec protein tyrosine kinase##BC143487|TEC|7006|tec protein tyrosine kinase##NM_003215|TEC|7006|tec protein tyrosine kinase##BC017829|TXK|7294|TXK tyrosine kinase##L27071|TXK|7294|TXK tyrosine kinase##NM_003328|TXK|7294|TXK tyrosine kinase##BC067881|NIPAL1|152519|NIPA-like domain containing 1##CR749484|NIPAL1|152519|NIPA-like domain containing 1##NM_207330|NIPAL1|152519|NIPA-like domain containing 1##AK095299|NIPAL1|152519|NIPA-like domain containing 1##BC040993|SLAIN2|57606|SLAIN motif family, member 2##AK291006|SLAIN2|57606|SLAIN motif family, member 2##BC006139|SLAIN2|57606|SLAIN motif family, member 2##BC007701|SLAIN2|57606|SLAIN motif family, member 2##BC012067|SLAIN2|57606|SLAIN motif family, member 2##NM_020846|SLAIN2|57606|SLAIN motif family, member 2##AB040891|SLAIN2|57606|SLAIN motif family, member 2##AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	0.9387	CTCF.p2:-9:0.939
chr5	98396179	98396304	reg1012600.p2	9.226	+	BC054860 BC117134 NM_001270 AF006513	-134013	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-291200	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-1877254	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	1474832	+	AF529367 TSC_hg19_v1_chr5_+_99871306	1475029	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	1842687	-	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.99947	CTCF.p2:0:0.999
chr10	47081102	47081202	reg1014091.p1	9.225	+	BC011672 NM_014696	-87607	+	TSC_hg19_v1_chr10_-_46970597 AK131036 AK293632 NM_031912 NM_181519	-110552	-	BC139914 AK290186 TSC_hg19_v1_chr10_-_46970538	-110642	-	AY649985 AY649986 NM_005972	2381	+	AB590156 CU687256 DQ893430 DQ896775 M81844 AK296573 AK300139 AK300158 BC021910 BC004376 NM_001098845 AK296976 Z36830 BC073755 NM_001040084 AK298761	92867	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	100532	-	BC011672|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##NM_014696|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##AK131036|SYT15|83849|synaptotagmin XV##AK293632|SYT15|83849|synaptotagmin XV##NM_031912|SYT15|83849|synaptotagmin XV##NM_181519|SYT15|83849|synaptotagmin XV##BC139914|SYT15|83849|synaptotagmin XV##AK290186|SYT15|83849|synaptotagmin XV##AY649985|PPYR1|5540|pancreatic polypeptide receptor 1##AY649986|PPYR1|5540|pancreatic polypeptide receptor 1##NM_005972|PPYR1|5540|pancreatic polypeptide receptor 1##DQ893430|ANXA8L2|244|annexin A8-like 2##DQ896775|ANXA8|653145|annexin A8##M81844|ANXA8|653145|annexin A8##AK296573|ANXA8|653145|annexin A8##AK300139|ANXA8|653145|annexin A8##AK300158|ANXA8|653145|annexin A8##BC004376|ANXA8|653145|annexin A8##NM_001098845|ANXA8L1|728113|annexin A8-like 1##Z36830|ANXA8|653145|annexin A8##BC073755|ANXA8|653145|annexin A8##NM_001040084|ANXA8|653145|annexin A8##AK298761|ANXA8|653145|annexin A8##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B	0.972494	CTCF.p2:-1:0.972
chr12	50569314	50569474	reg1011113.p1	9.225	+	TSC_hg19_v1_chr12_-_50561153 AK298924	-8169	-	TSC_hg19_v1_chr12_-_50561112 AK026014	-8269	-	AB527479 TSC_hg19_v1_chr12_-_50561095 AK294521 BC014637 AK300937 NM_147190 BC033558	-8303	-	AK023649 AF157325 NM_001243775	25915	-	AF198455 AK297766 TSC_hg19_v1_chr12_-_50616438 NM_001113547	47062	-	BC136763 BC144402 BC144403 TSC_hg19_v1_chr12_-_50677266 AK000372 AK314447 AF198454 AL136911 AK222971 AB209512 BC110815 NM_001113546 NM_016357	107901	-	AK298924|CERS5|91012|ceramide synthase 5##AK026014|CERS5|91012|ceramide synthase 5##AK294521|CERS5|91012|ceramide synthase 5##BC014637|CERS5|91012|ceramide synthase 5##AK300937|CERS5|91012|ceramide synthase 5##NM_147190|CERS5|91012|ceramide synthase 5##BC033558|CERS5|91012|ceramide synthase 5##AK023649|LIMA1|51474|LIM domain and actin binding 1##AF157325|LIMA1|51474|LIM domain and actin binding 1##NM_001243775|LIMA1|51474|LIM domain and actin binding 1##AF198455|LIMA1|51474|LIM domain and actin binding 1##AK297766|LIMA1|51474|LIM domain and actin binding 1##NM_001113547|LIMA1|51474|LIM domain and actin binding 1##BC136763|LIMA1|51474|LIM domain and actin binding 1##BC144402|LIMA1|51474|LIM domain and actin binding 1##BC144403|LIMA1|51474|LIM domain and actin binding 1##AK000372|LIMA1|51474|LIM domain and actin binding 1##AK314447|LIMA1|51474|LIM domain and actin binding 1##AF198454|LIMA1|51474|LIM domain and actin binding 1##AL136911|LIMA1|51474|LIM domain and actin binding 1##AK222971|LIMA1|51474|LIM domain and actin binding 1##AB209512|LIMA1|51474|LIM domain and actin binding 1##BC110815|LIMA1|51474|LIM domain and actin binding 1##NM_001113546|LIMA1|51474|LIM domain and actin binding 1##NM_016357|LIMA1|51474|LIM domain and actin binding 1	0.9882	CTCF.p2:35:0.988
chr14	40887104	40887245	reg1015924.p1	9.225	+	BC053537 BC068566 BC030611 NM_203301	-985513	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-985817	-	TSC_hg19_v1_chr14_+_39736592 BC039017 AK315254 BC029513 BC051363 U73682	-1150601	+	NM_152447 AK096627	1189593	+	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	4089301	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	4479324	+	BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##BC039017|CTAGE5|4253|CTAGE family, member 5##AK315254|CTAGE5|4253|CTAGE family, member 5##BC029513|CTAGE5|4253|CTAGE family, member 5##BC051363|CTAGE5|4253|CTAGE family, member 5##U73682|CTAGE5|4253|CTAGE family, member 5##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28	0.601484	CTCF.p2:8:0.601
chr19	42784002	42784148	reg1013816.p1	9.225	+	AK300627 TSC_hg19_v1_chr19_-_42759281 AK314278 NM_006494	-24770	-	AB463618 CU692500 DQ893568 DQ896817 TSC_hg19_v1_chr19_-_42759278 BC022231 U15655	-24861	-	TSC_hg19_v1_chr19_-_42746755 BC027984	-37317	-	TSC_hg19_v1_chr19_+_42788616 AF363689 DQ388764 NM_015125 AB527445	4654	+	BC063021 AK291528 NM_199285	22191	+	AB528706 CR407626 TSC_hg19_v1_chr19_-_42806760 D63391 BC007863 BC003016 NM_002573	22585	-	AK300627|ERF|2077|Ets2 repressor factor##AK314278|ERF|2077|Ets2 repressor factor##NM_006494|ERF|2077|Ets2 repressor factor##DQ893568|ERF|2077|Ets2 repressor factor##DQ896817|ERF|2077|Ets2 repressor factor##BC022231|ERF|2077|Ets2 repressor factor##U15655|ERF|2077|Ets2 repressor factor##BC027984|GSK3A|2931|glycogen synthase kinase 3 alpha##AF363689|CIC|23152|capicua homolog (Drosophila)##NM_015125|CIC|23152|capicua homolog (Drosophila)##BC063021|PRR19|284338|proline rich 19##AK291528|PRR19|284338|proline rich 19##NM_199285|PRR19|284338|proline rich 19##CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	0.771838	CTCF.p2:20:0.772
chr6	16183434	16183579	reg1013970.p1	9.225	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-40196	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-54069	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	-54204	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	55345	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	578191	-	NM_001190766	918982	+	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236	0.975607	CTCF.p2:12:0.976
chr9	39149785	39149924	reg1016428.p1	9.225	+	TSC_hg19_v1_chr9_-_38620602 BC056266	-529231	-	AB385522 AB095935 BC152434 NM_147195	-529533	-	TSC_hg19_v1_chr9_-_38424452 AB463783 NM_001007563	-725389	-	AB385498 AK294281 AB051501 BC132737 BC144130 AK056833 NM_033655	138326	-	AK302569 NM_001040065 NM_001085452 BC146855	205831	+	AK302569 NM_001040065 NM_001085452 BC146855	735107	+	BC056266|ANKRD18A|253650|ankyrin repeat domain 18A##AB095935|ANKRD18A|253650|ankyrin repeat domain 18A##BC152434|ANKRD18A|253650|ankyrin repeat domain 18A##NM_147195|ANKRD18A|253650|ankyrin repeat domain 18A##NM_001007563|IGFBPL1|347252|insulin-like growth factor binding protein-like 1##AK294281|CNTNAP3|79937|contactin associated protein-like 3##AB051501|CNTNAP3|79937|contactin associated protein-like 3##BC132737|CNTNAP3|79937|contactin associated protein-like 3##BC144130|CNTNAP3|79937|contactin associated protein-like 3##AK056833|CNTNAP3|79937|contactin associated protein-like 3##NM_033655|CNTNAP3|79937|contactin associated protein-like 3##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2	0.969308	CTCF.p2:5:0.969
chr9	88040191	88040322	reg1013514.p2	9.225	+	U12140 TSC_hg19_v1_chr9_+_87285349	-754924	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-755504	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-755560	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	316615	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	515818	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	515922	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.99819	CTCF.p2:-5:0.998
chr13	36857118	36857276	reg1015616.p1	9.224	+	AB527575 AK000456 BC025383 NM_017826	-68489	-	NM_004734 TSC_hg19_v1_chr13_-_36705517	-151681	-	AK295102 TSC_hg19_v1_chr13_-_36705468	-151724	-	BC171867 BC146975 BC171872 BC171874 BC171880 BC171881 BC171882 BC171884 TSC_hg19_v1_chr13_-_36871939 AK131058 AK308999	14725	-	BC013944 TSC_hg19_v1_chr13_-_36872001 BC037403 AK301863 NM_001144981 NM_001144982 NM_001144983 NM_001144984 NM_001144985 NM_001144986 NM_001198908 NM_001198910	14795	-	TSC_hg19_v1_chr13_-_36920464 AK001949 AB011182 AY123329 BC047083	63244	-	AK000456|SOHLH2|54937|spermatogenesis and oogenesis specific basic helix-loop-helix 2##BC025383|SOHLH2|54937|spermatogenesis and oogenesis specific basic helix-loop-helix 2##NM_017826|SOHLH2|54937|spermatogenesis and oogenesis specific basic helix-loop-helix 2##NM_004734|DCLK1|9201|doublecortin-like kinase 1##AK295102|DCLK1|9201|doublecortin-like kinase 1##BC171867|CCDC169|728591|coiled-coil domain containing 169##BC146975|CCDC169|728591|coiled-coil domain containing 169##BC171872|CCDC169|728591|coiled-coil domain containing 169##BC171874|CCDC169|728591|coiled-coil domain containing 169##BC171880|CCDC169|728591|coiled-coil domain containing 169##BC171881|CCDC169|728591|coiled-coil domain containing 169##BC171882|CCDC169|728591|coiled-coil domain containing 169##BC171884|CCDC169|728591|coiled-coil domain containing 169##AK131058|CCDC169|728591|coiled-coil domain containing 169##AK308999|CCDC169|728591|coiled-coil domain containing 169##BC013944|CCDC169|728591|coiled-coil domain containing 169##BC037403|CCDC169|728591|coiled-coil domain containing 169##AK301863|CCDC169-SOHLH2|100526761|CCDC169-SOHLH2 readthrough##NM_001144981|CCDC169|728591|coiled-coil domain containing 169##NM_001144982|CCDC169|728591|coiled-coil domain containing 169##NM_001144983|CCDC169|728591|coiled-coil domain containing 169##NM_001144984|CCDC169|728591|coiled-coil domain containing 169##NM_001144985|CCDC169|728591|coiled-coil domain containing 169##NM_001144986|CCDC169|728591|coiled-coil domain containing 169##NM_001198908|CCDC169|728591|coiled-coil domain containing 169##NM_001198910|CCDC169-SOHLH2|100526761|CCDC169-SOHLH2 readthrough##AK001949|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##AB011182|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##AY123329|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##BC047083|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)	0.988333	CTCF.p2:-27:0.988
chr4	88760621	88760752	reg1016620.p1	9.224	+	AK307774 NM_001184695 NM_001184696 NM_001184697 NM_020203 AJ276396 BC128158 AF325916	-6557	+	AK075076 NM_001184694	-18131	+	NM_004967 TSC_hg19_v1_chr4_+_88720705 J05213	-39965	+	NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 TSC_hg19_v1_chr4_+_88896809 JF412667 BC093033	136124	+	TSC_hg19_v1_chr4_+_88896865 BX648003 J04765 AK057738 AK075463 AK290090 AK296035 BC007016 BC017387 BC022844 AK295491	136166	+	TSC_hg19_v1_chr4_+_88896868 AK290104 M83248 AK315461 AF052124	136193	+	AK307774|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184695|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184696|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184697|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_020203|MEPE|56955|matrix extracellular phosphoglycoprotein##AJ276396|MEPE|56955|matrix extracellular phosphoglycoprotein##BC128158|MEPE|56955|matrix extracellular phosphoglycoprotein##AF325916|MEPE|56955|matrix extracellular phosphoglycoprotein##AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_004967|IBSP|3381|integrin-binding sialoprotein##J05213|IBSP|3381|integrin-binding sialoprotein##NM_000582|SPP1|6696|secreted phosphoprotein 1##NM_001040058|SPP1|6696|secreted phosphoprotein 1##NM_001040060|SPP1|6696|secreted phosphoprotein 1##NM_001251829|SPP1|6696|secreted phosphoprotein 1##NM_001251830|SPP1|6696|secreted phosphoprotein 1##JF412667|SPP1|6696|secreted phosphoprotein 1##BC093033|SPP1|6696|secreted phosphoprotein 1##BX648003|SPP1|6696|secreted phosphoprotein 1##J04765|SPP1|6696|secreted phosphoprotein 1##AK057738|SPP1|6696|secreted phosphoprotein 1##AK075463|SPP1|6696|secreted phosphoprotein 1##AK290090|SPP1|6696|secreted phosphoprotein 1##AK296035|SPP1|6696|secreted phosphoprotein 1##BC007016|SPP1|6696|secreted phosphoprotein 1##BC017387|SPP1|6696|secreted phosphoprotein 1##BC022844|SPP1|6696|secreted phosphoprotein 1##AK295491|SPP1|6696|secreted phosphoprotein 1##AK290104|SPP1|6696|secreted phosphoprotein 1##M83248|SPP1|6696|secreted phosphoprotein 1##AK315461|SPP1|6696|secreted phosphoprotein 1##AF052124|SPP1|6696|secreted phosphoprotein 1	0.0	
chr11	66025834	66025956	reg1014719.p1	9.223	+	TSC_hg19_v1_chr11_+_66025238 NM_001134776 NM_001134774 NM_022822 AK022907 AK315725 AL136864 BC034373 AK022449	-706	+	TSC_hg19_v1_chr11_+_66024752 NM_001134775	-1140	+	AK293966 TSC_hg19_v1_chr11_+_65998046 BC042909	-27920	+	TSC_hg19_v1_chr11_+_66036087 NM_030981 AK292086 AK315333	10169	+	AL136635 BC028331 TSC_hg19_v1_chr11_+_66036109 BC071169 AF092437 AB464119 AM393195 CU687104 AJ245875 CR533462	10232	+	TSC_hg19_v1_chr11_+_66045696 BC047953 NM_182553	19781	+	NM_001134776|KLC2|64837|kinesin light chain 2##NM_001134774|KLC2|64837|kinesin light chain 2##NM_022822|KLC2|64837|kinesin light chain 2##AK022907|KLC2|64837|kinesin light chain 2##AK315725|KLC2|64837|kinesin light chain 2##AL136864|KLC2|64837|kinesin light chain 2##BC034373|KLC2|64837|kinesin light chain 2##AK022449|KLC2|64837|kinesin light chain 2##NM_001134775|KLC2|64837|kinesin light chain 2##AK293966|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC042909|PACS1|55690|phosphofurin acidic cluster sorting protein 1##NM_030981|RAB1B|81876|RAB1B, member RAS oncogene family##AK292086|RAB1B|81876|RAB1B, member RAS oncogene family##AK315333|RAB1B|81876|RAB1B, member RAS oncogene family##AL136635|RAB1B|81876|RAB1B, member RAS oncogene family##BC028331|RAB1B|81876|RAB1B, member RAS oncogene family##BC071169|RAB1B|81876|RAB1B, member RAS oncogene family##AF092437|RAB1B|81876|RAB1B, member RAS oncogene family##AM393195|RAB1B|81876|RAB1B, member RAS oncogene family##AJ245875|RAB1B|81876|RAB1B, member RAS oncogene family##CR533462|RAB1B|81876|RAB1B, member RAS oncogene family##BC047953|CNIH2|254263|cornichon homolog 2 (Drosophila)##NM_182553|CNIH2|254263|cornichon homolog 2 (Drosophila)	0.715834	CTCF.p2:3:0.716
chr16	17570733	17570854	reg1014874.p1	9.223	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	-5988	-	TSC_hg19_v1_chr16_+_16326508 AB463143	-1244263	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1244305	+	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1002598	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1227303	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	1230862	-	AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a	0.457859	CTCF.p2:1:0.458
chr16	2720189	2720296	reg1013965.p2	9.223	+	AK096394 TSC_hg19_v1_chr16_+_2653445 BC093998 BC111952 AK291606 BC062576 BC036664 BC056242 BC105289 BC080650	-66825	+	BC033494 TSC_hg19_v1_chr16_+_2588066 AB463382 DQ892297 DQ895496 EU832784 GQ129441 CU689632 CR536517 BC040324	-132135	+	AK131060 AK222581 AK293900 TSC_hg19_v1_chr16_+_2588021 AF017995 Y15056	-132207	+	BC063714 TSC_hg19_v1_chr16_-_2723400 AK091794 AX747190 BC043252	3163	-	TSC_hg19_v1_chr16_+_2732524 NM_018992 AK000047	12257	+	TSC_hg19_v1_chr16_+_2732528 BC007314	12349	+	AK096394|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC093998|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC111952|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##AK291606|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC062576|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC036664|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC056242|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC105289|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC080650|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC033494|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##DQ892297|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##DQ895496|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##EU832784|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##GQ129441|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##CR536517|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##BC040324|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK131060|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK222581|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK293900|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AF017995|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##Y15056|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK091794|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##AX747190|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##BC043252|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##NM_018992|KCTD5|54442|potassium channel tetramerisation domain containing 5##AK000047|KCTD5|54442|potassium channel tetramerisation domain containing 5##BC007314|KCTD5|54442|potassium channel tetramerisation domain containing 5	0.505283	CTCF.p2:-2:0.505
chr6	52589358	52589483	reg1014533.p1	9.223	+	TSC_hg19_v1_chr6_+_52535913 NM_014051 AF239771 AK312063 BC015097 BC019328	-53497	+	TSC_hg19_v1_chr6_+_52529228 AK091117	-60192	+	AK095117 TSC_hg19_v1_chr6_+_52442225	-147246	+	AK292602 AK313601 M16594 BC002895 NM_000846	38896	-	BC053578 BC110891 M15872 TSC_hg19_v1_chr6_-_52668615 AK293371 M14777 M21758 M25627 NM_145740 AK310324	79261	-	NM_153699	121472	-	NM_014051|TMEM14A|28978|transmembrane protein 14A##AF239771|TMEM14A|28978|transmembrane protein 14A##AK312063|TMEM14A|28978|transmembrane protein 14A##BC015097|TMEM14A|28978|transmembrane protein 14A##BC019328|TMEM14A|28978|transmembrane protein 14A##AK091117|LOC730101|730101|uncharacterized LOC730101##AK095117|FLJ37798|401264|uncharacterized LOC401264##AK292602|GSTA2|2939|glutathione S-transferase alpha 2##AK313601|GSTA2|2939|glutathione S-transferase alpha 2##M16594|GSTA2|2939|glutathione S-transferase alpha 2##BC002895|GSTA2|2939|glutathione S-transferase alpha 2##NM_000846|GSTA2|2939|glutathione S-transferase alpha 2##BC053578|GSTA1|2938|glutathione S-transferase alpha 1##BC110891|GSTA1|2938|glutathione S-transferase alpha 1##M15872|GSTA1|2938|glutathione S-transferase alpha 1##AK293371|GSTA1|2938|glutathione S-transferase alpha 1##M14777|GSTA1|2938|glutathione S-transferase alpha 1##M21758|GSTA1|2938|glutathione S-transferase alpha 1##M25627|GSTA1|2938|glutathione S-transferase alpha 1##NM_145740|GSTA1|2938|glutathione S-transferase alpha 1##AK310324|GSTA1|2938|glutathione S-transferase alpha 1##NM_153699|GSTA5|221357|glutathione S-transferase alpha 5	0.787833	CTCF.p2:-12:0.788
chr1	214387402	214387527	reg1013979.p2	9.222	+	BC024201 NM_002763	-225605	+	AK298182 TSC_hg19_v1_chr1_+_214161296 U44060	-226175	+	TSC_hg19_v1_chr1_+_213224716 AB070706 EF491805	-1162704	+	TSC_hg19_v1_chr1_+_214454550 BC068511 BC049367 BC094747 BC057793 NM_020197 AF226053 BC098133 BC098276 BC098305 BC098335 BC028104 AK313868 AB590916 BC039890	66973	+	X82676 TSC_hg19_v1_chr1_-_214724620 BC017300 AK090596	337143	-	TSC_hg19_v1_chr1_-_214724946 AK298120 BX538306 AK291641	337435	-	BC024201|PROX1|5629|prospero homeobox 1##NM_002763|PROX1|5629|prospero homeobox 1##AK298182|PROX1|5629|prospero homeobox 1##U44060|PROX1|5629|prospero homeobox 1##AB070706|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC068511|SMYD2|56950|SET and MYND domain containing 2##BC049367|SMYD2|56950|SET and MYND domain containing 2##BC094747|SMYD2|56950|SET and MYND domain containing 2##BC057793|SMYD2|56950|SET and MYND domain containing 2##NM_020197|SMYD2|56950|SET and MYND domain containing 2##AF226053|SMYD2|56950|SET and MYND domain containing 2##BC098133|SMYD2|56950|SET and MYND domain containing 2##BC098276|SMYD2|56950|SET and MYND domain containing 2##BC098305|SMYD2|56950|SET and MYND domain containing 2##BC098335|SMYD2|56950|SET and MYND domain containing 2##BC028104|SMYD2|56950|SET and MYND domain containing 2##AK313868|SMYD2|56950|SET and MYND domain containing 2##BC039890|SMYD2|56950|SET and MYND domain containing 2##X82676|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##BC017300|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK090596|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK298120|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK291641|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14	0.999473	CTCF.p2:-1:0.999
chr20	30148028	30148149	reg1013701.p1	9.222	+	TSC_hg19_v1_chr20_+_30135200 BC053868	-12854	+	TSC_hg19_v1_chr20_+_30102316 AJ420895 DQ896206 CU687568 AF515663	-45755	+	AF172086 BC062595 TSC_hg19_v1_chr20_+_30102287 AF483215 AJ345029 AK074686	-45807	+	TSC_hg19_v1_chr20_+_30193091 NM_002165 NM_181353 AK313786 BC012420 BC000613 S78986 X77956 AK291152 D13889 D13890 S78825 AB463776 CU680316 DQ891293 DQ893342 DQ894477 DQ896657 EU176458 EU176468 EU176808 BT007443	45048	+	AF257180 NM_032609 BC057779	77614	+	BC032024 TSC_hg19_v1_chr20_-_30288101	140009	-	AJ420895|HM13|81502|histocompatibility (minor) 13##DQ896206|HM13|81502|histocompatibility (minor) 13##AF515663|HM13|81502|histocompatibility (minor) 13##AF172086|HM13|81502|histocompatibility (minor) 13##BC062595|HM13|81502|histocompatibility (minor) 13##AF483215|HM13|81502|histocompatibility (minor) 13##AJ345029|HM13|81502|histocompatibility (minor) 13##AK074686|HM13|81502|histocompatibility (minor) 13##NM_002165|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##NM_181353|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK313786|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC012420|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC000613|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78986|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##X77956|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK291152|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13889|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13890|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78825|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ891293|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ893342|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ894477|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ896657|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176458|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176468|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176808|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BT007443|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AF257180|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_032609|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##BC057779|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)	0.993324	CTCF.p2:-24:0.993
chrX	62495159	62495261	reg1014544.p1	9.222	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-4558251	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-4876750	+	NM_007157	-4876942	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	75989	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	153057	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	285657	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.686645	CTCF.p2:2:0.687
chr6	51885884	51886018	reg1013864.p1	9.220	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-1099416	+	AY028376 NM_172238	-1204695	+	DQ012016 NM_001037498	-1869588	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	66444	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	165255	+	AF384857 JF305974 AB590713 BC070124 NM_052872	223310	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.996354	CTCF.p2:16:0.996
chr7	98439407	98439506	reg1000394.p1	9.220	+	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	-192720	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-409023	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-409162	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	28074	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	28171	-	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	28220	-	NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130	0.0	
chr9	139738340	139738457	reg1011966.p2	9.220	+	TSC_hg19_v1_chr9_+_139702403 BC035786 BC018960	-35983	+	TSC_hg19_v1_chr9_+_139702398 AK307431	-36001	+	TSC_hg19_v1_chr9_+_139702390 GQ169126	-36007	+	NM_001080482	468	+	TSC_hg19_v1_chr9_+_139743239 NM_001135861 NM_014172	4849	+	TSC_hg19_v1_chr9_+_139743450 AF131857 AF285119	5096	+	BC035786|C9orf86|55684|chromosome 9 open reading frame 86##BC018960|C9orf86|55684|chromosome 9 open reading frame 86##AK307431|C9orf86|55684|chromosome 9 open reading frame 86##GQ169126|C9orf86|55684|chromosome 9 open reading frame 86##NM_001080482|C9orf172|389813|chromosome 9 open reading frame 172##NM_001135861|PHPT1|29085|phosphohistidine phosphatase 1##NM_014172|PHPT1|29085|phosphohistidine phosphatase 1##AF131857|PHPT1|29085|phosphohistidine phosphatase 1##AF285119|PHPT1|29085|phosphohistidine phosphatase 1	0.990669	CTCF.p2:13:0.991
chr2	183531797	183531914	reg1014750.p1	9.219	+	AK295657 AB384753 DQ892369 DQ893372 DQ895578 DQ896694 AF110237 NM_005019 BC022480 AF110240 AF110236 NM_001003683 U40370 AK294239	-144571	-	NM_001080545 AK129898 AF494535 BX647581 BC017943	-681206	+	TSC_hg19_v1_chr2_+_182756689 BC052581 BC064499 BC028706 AK291745 BX647257 AB116937 AB385517 BX647967 AK304238 BX648888	-775062	+	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	49219	+	TSC_hg19_v1_chr2_+_183582683 BC107425 AF314529 AY089971 HQ258514 HQ258651 AL832646 AK027450	50892	+	TSC_hg19_v1_chr2_+_183608333 AK074905	76495	+	AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC052581|SSFA2|6744|sperm specific antigen 2##BC064499|SSFA2|6744|sperm specific antigen 2##BC028706|SSFA2|6744|sperm specific antigen 2##AK291745|SSFA2|6744|sperm specific antigen 2##BX647257|SSFA2|6744|sperm specific antigen 2##AB116937|SSFA2|6744|sperm specific antigen 2##BX647967|SSFA2|6744|sperm specific antigen 2##AK304238|SSFA2|6744|sperm specific antigen 2##BX648888|SSFA2|6744|sperm specific antigen 2##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC107425|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF314529|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY089971|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258514|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258651|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832646|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027450|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK074905|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	0.839311	CTCF.p2:-4:0.839
chr22	31545114	31545225	reg1011184.p2	9.219	+	DQ892832 DQ896078 BC025316 NM_015715 AF220490	-8704	-	TSC_hg19_v1_chr22_+_31518979 AK092859 AK293992 AX747773 BC041652 NM_001002837 AK309548 AK095944 AK126610 BC109288	-26210	+	TSC_hg19_v1_chr22_-_31503490 CU680602 BC013421 BC030236 BC042299 BC068004 NM_080430 AK308582	-41637	-	NM_001135825 NM_152267 TSC_hg19_v1_chr22_+_31556175 AK297414 BC035684	10991	+	TSC_hg19_v1_chr22_+_31556186 BC012817 BC009504	11018	+	TSC_hg19_v1_chr22_+_31556196 DQ296559 DQ296560 DQ296561 DQ296562 DQ296563 DQ296564 DQ296565	11025	+	DQ892832|PLA2G3|50487|phospholipase A2, group III##DQ896078|PLA2G3|50487|phospholipase A2, group III##BC025316|PLA2G3|50487|phospholipase A2, group III##NM_015715|PLA2G3|50487|phospholipase A2, group III##AF220490|PLA2G3|50487|phospholipase A2, group III##AK092859|INPP5J|27124|inositol polyphosphate-5-phosphatase J##AK293992|INPP5J|27124|inositol polyphosphate-5-phosphatase J##BC041652|INPP5J|27124|inositol polyphosphate-5-phosphatase J##NM_001002837|INPP5J|27124|inositol polyphosphate-5-phosphatase J##AK309548|INPP5J|27124|inositol polyphosphate-5-phosphatase J##AK095944|INPP5J|27124|inositol polyphosphate-5-phosphatase J##AK126610|INPP5J|27124|inositol polyphosphate-5-phosphatase J##BC109288|INPP5J|27124|inositol polyphosphate-5-phosphatase J##BC013421|SELM|140606|selenoprotein M##BC030236|SELM|140606|selenoprotein M##BC042299|SELM|140606|selenoprotein M##BC068004|SELM|140606|selenoprotein M##NM_080430|SELM|140606|selenoprotein M##NM_001135825|RNF185|91445|ring finger protein 185##NM_152267|RNF185|91445|ring finger protein 185##AK297414|RNF185|91445|ring finger protein 185##BC035684|RNF185|91445|ring finger protein 185##BC012817|RNF185|91445|ring finger protein 185##BC009504|RNF185|91445|ring finger protein 185##DQ296559|RNF185|91445|ring finger protein 185##DQ296560|RNF185|91445|ring finger protein 185##DQ296561|RNF185|91445|ring finger protein 185##DQ296562|RNF185|91445|ring finger protein 185##DQ296563|RNF185|91445|ring finger protein 185##DQ296564|RNF185|91445|ring finger protein 185##DQ296565|RNF185|91445|ring finger protein 185	0.898014	CTCF.p2:1:0.884
chr12	3767645	3767778	reg1015631.p1	9.218	+	AK125333 TSC_hg19_v1_chr12_-_3601984	-165726	-	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	-167270	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-581149	+	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	94557	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	94671	-	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	214789	-	AK125333|LOC100129223|100129223|uncharacterized LOC100129223##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11	0.992257	CTCF.p2:4:0.992
chr5	127093334	127093462	reg1015770.p1	9.218	+	NM_001127385 AB219832 BC071790	-104673	+	NM_001048252 AB219764	-108675	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	-234204	+	TSC_hg19_v1_chr5_-_127418765 AF088062 BX648677 BC036629	325365	-	AK090949 AX746698 TSC_hg19_v1_chr5_-_127419417	325961	-	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	326075	+	NM_001127385|CTXN3|613212|cortexin 3##AB219832|CTXN3|613212|cortexin 3##BC071790|CTXN3|613212|cortexin 3##NM_001048252|CTXN3|613212|cortexin 3##AB219764|CTXN3|613212|cortexin 3##AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1##AF088062|FLJ33630|644873|uncharacterized LOC644873##BX648677|FLJ33630|644873|uncharacterized LOC644873##BC036629|FLJ33630|644873|uncharacterized LOC644873##AK090949|FLJ33630|644873|uncharacterized LOC644873##AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2	0.234076	CTCF.p2:-15:0.234
chr7	154799773	154799877	reg1014020.p1	9.218	+	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	-4614	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	-5155	-	TSC_hg19_v1_chr7_+_154720213 BC033053 AK311721 AK056609 BC050402	-79628	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	62752	+	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	289697	+	AK291675 TSC_hg19_v1_chr7_+_155089667	289819	+	BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##BC033053|LOC100132707|100132707|uncharacterized LOC100132707##AK311721|LOC100132707|100132707|uncharacterized LOC100132707##AK056609|LOC100132707|100132707|uncharacterized LOC100132707##BC050402|LOC100132707|100132707|uncharacterized LOC100132707##BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##AK291675|INSIG1|3638|insulin induced gene 1	0.930163	CTCF.p2:16:0.906
chr8	126709095	126709212	reg1010079.p1	9.218	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-266574	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-605056	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-605096	-	TSC_hg19_v1_chr8_-_126963395 BX648371	254260	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	861402	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	861571	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.997332	CTCF.p2:-25:0.997
chr10	106110038	106110161	reg1012646.p2	9.217	+	AB051541 TSC_hg19_v1_chr10_-_106098200 AK129877	-11910	-	BC070108 NM_033397	-16437	-	BC046194 NM_001191014 NM_001191015 BC023583 AK297522	-75195	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	3442	+	AB028982 NM_014978	290759	+	BC117417 TSC_hg19_v1_chr10_+_106401047	290946	+	AB051541|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##BC070108|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##NM_033397|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##BC046194|GSTO2|119391|glutathione S-transferase omega 2##NM_001191014|GSTO2|119391|glutathione S-transferase omega 2##NM_001191015|GSTO2|119391|glutathione S-transferase omega 2##BC023583|GSTO2|119391|glutathione S-transferase omega 2##AK297522|GSTO2|119391|glutathione S-transferase omega 2##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3	0.529173	CTCF.p2:20:0.529
chr11	45361695	45361812	reg1013038.p2	9.217	+	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	-54003	-	AF275818 NM_020229	-246190	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	-389336	-	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	325431	-	NM_001145265 NM_001145266	463869	+	TSC_hg19_v1_chr11_+_45825944 AK225428 AK002182 AK091245	464161	+	AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1##AK225428|SLC35C1|55343|solute carrier family 35, member C1##AK002182|SLC35C1|55343|solute carrier family 35, member C1##AK091245|SLC35C1|55343|solute carrier family 35, member C1	0.991426	CTCF.p2:4:0.991
chr9	1837604	1837747	reg1013772.p2	9.216	+	AF130729 NM_181872	-787066	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-787305	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-787331	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	177621	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	784132	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	784399	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.94433	CTCF.p2:-18:0.933
chr2	219523422	219523531	reg1013569.p1	9.215	+	BC006355 AK023083 AK297808 TSC_hg19_v1_chr2_+_219472641	-50839	+	TSC_hg19_v1_chr2_+_219472618 AK057186 AK223203 AK299458	-50857	+	NM_032726 AY512961 TSC_hg19_v1_chr2_+_219472601	-50929	+	TSC_hg19_v1_chr2_-_219524332 BC038226 D87073 NM_001105537 BC033631 BC053849	805	-	NM_001079866 NM_004328 TSC_hg19_v1_chr2_+_219524442 BX571752 AK289363 AF038195	935	+	TSC_hg19_v1_chr2_+_219524452 BC000416 BC007500 AF026849 AK096210	999	+	BC006355|PLCD4|84812|phospholipase C, delta 4##AK023083|PLCD4|84812|phospholipase C, delta 4##AK297808|PLCD4|84812|phospholipase C, delta 4##AK057186|PLCD4|84812|phospholipase C, delta 4##AK223203|PLCD4|84812|phospholipase C, delta 4##AK299458|PLCD4|84812|phospholipase C, delta 4##NM_032726|PLCD4|84812|phospholipase C, delta 4##AY512961|PLCD4|84812|phospholipase C, delta 4##BC038226|ZNF142|7701|zinc finger protein 142##D87073|ZNF142|7701|zinc finger protein 142##NM_001105537|ZNF142|7701|zinc finger protein 142##BC033631|ZNF142|7701|zinc finger protein 142##BC053849|ZNF142|7701|zinc finger protein 142##NM_001079866|BCS1L|617|BCS1-like (S. cerevisiae)##NM_004328|BCS1L|617|BCS1-like (S. cerevisiae)##BX571752|BCS1L|617|BCS1-like (S. cerevisiae)##AK289363|BCS1L|617|BCS1-like (S. cerevisiae)##AF038195|BCS1L|617|BCS1-like (S. cerevisiae)##BC000416|BCS1L|617|BCS1-like (S. cerevisiae)##BC007500|BCS1L|617|BCS1-like (S. cerevisiae)##AF026849|BCS1L|617|BCS1-like (S. cerevisiae)##AK096210|BCS1L|617|BCS1-like (S. cerevisiae)	0.764495	CTCF.p2:1:0.764
chr3	139146529	139146644	reg1014327.p1	9.215	+	TSC_hg19_v1_chr3_-_139108523 AK302943 NM_004766	-38067	-	TSC_hg19_v1_chr3_-_139108486 AK128561	-38089	-	TSC_hg19_v1_chr3_-_139108462 AK304219 X70476 BC000326	-38142	-	BC069296 BC069361 BC069396 BC069424 BC069447 BC069469 BC069513 BC069522 U13831 CU686882 AB527682 NM_004164 AK291978	48742	-	AB464149 CR541979 CR542005 EU831403 EU831495 BC121052 M36809 TSC_hg19_v1_chr3_-_139258472	111836	-	AK290315 AK307378 TSC_hg19_v1_chr3_-_139258479 M11433	111897	-	AK302943|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##NM_004766|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##AK304219|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##X70476|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##BC000326|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##BC069296|RBP2|5948|retinol binding protein 2, cellular##BC069361|RBP2|5948|retinol binding protein 2, cellular##BC069396|RBP2|5948|retinol binding protein 2, cellular##BC069424|RBP2|5948|retinol binding protein 2, cellular##BC069447|RBP2|5948|retinol binding protein 2, cellular##BC069469|RBP2|5948|retinol binding protein 2, cellular##BC069513|RBP2|5948|retinol binding protein 2, cellular##BC069522|RBP2|5948|retinol binding protein 2, cellular##U13831|RBP2|5948|retinol binding protein 2, cellular##NM_004164|RBP2|5948|retinol binding protein 2, cellular##AK291978|RBP2|5948|retinol binding protein 2, cellular##CR541979|RBP1|5947|retinol binding protein 1, cellular##CR542005|RBP1|5947|retinol binding protein 1, cellular##EU831403|RBP1|5947|retinol binding protein 1, cellular##EU831495|RBP1|5947|retinol binding protein 1, cellular##BC121052|RBP1|5947|retinol binding protein 1, cellular##M36809|RBP1|5947|retinol binding protein 1, cellular##AK290315|RBP1|5947|retinol binding protein 1, cellular##M11433|RBP1|5947|retinol binding protein 1, cellular	0.587544	CTCF.p2:-9:0.588
chr6	2634821	2634953	reg1013189.p1	9.215	+	TSC_hg19_v1_chr6_+_2245995 AK023629	-388874	+	CR541929 CR541947 DQ892789 DQ896036 AF042377 TSC_hg19_v1_chr6_-_2245809 AK130651 AK313953 BC000117 NM_001500	-389089	-	AF040260 NM_001253846	-458663	-	NM_152554	410	-	BX647582 NM_001012418 AK096893	116289	-	TSC_hg19_v1_chr6_+_2765561 AK315047	130693	+	CR541929|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541947|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ892789|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ896036|GMDS|2762|GDP-mannose 4,6-dehydratase##AF042377|GMDS|2762|GDP-mannose 4,6-dehydratase##AK130651|GMDS|2762|GDP-mannose 4,6-dehydratase##AK313953|GMDS|2762|GDP-mannose 4,6-dehydratase##BC000117|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001500|GMDS|2762|GDP-mannose 4,6-dehydratase##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_152554|C6orf195|154386|chromosome 6 open reading frame 195##BX647582|MYLK4|340156|myosin light chain kinase family, member 4##NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4##AK096893|MYLK4|340156|myosin light chain kinase family, member 4##AK315047|WRNIP1|56897|Werner helicase interacting protein 1	0.999924	CTCF.p2:-7:1.000
chr7	6970506	6970624	reg1013247.p1	9.215	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-104667	-	AK296026 CU679629 AK000993 TSC_hg19_v1_chr7_-_6865849	-104727	-	AK314983 BC034495 NM_001099697 NM_173565	-176826	+	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	251682	+	BC136892 BC144431 AJ890451 NM_001037763	604889	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	636023	+	BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK296026|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK000993|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)	0.865346	CTCF.p2:0:0.580	CTCF.p2:37:0.285
chr1	234348619	234348735	reg1013225.p1	9.214	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-308065	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-598758	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	-598854	+	TSC_hg19_v1_chr1_+_234350005 BC037878	1329	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	160695	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	266183	-	AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##BC037878|SLC35F3|148641|solute carrier family 35, member F3##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1	0.901851	CTCF.p2:0:0.902
chr4	104021023	104021180	reg1015832.p1	9.213	+	AK128463 TSC_hg19_v1_chr4_-_104020987 AF164790 AK023323 AK290160 AK291335 AK300626 BC037277 BC095414 AY358841 BC001953 NM_020139	-101	-	NM_178833	-22932	-	TSC_hg19_v1_chr4_-_103997929 AK172823	-23176	-	AB527246 AB209996 TSC_hg19_v1_chr4_-_104119535 AK290362 NM_001813 Z15005	98419	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	619799	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	1391381	-	AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_178833|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##AK172823|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##AB209996|CENPE|1062|centromere protein E, 312kDa##AK290362|CENPE|1062|centromere protein E, 312kDa##NM_001813|CENPE|1062|centromere protein E, 312kDa##Z15005|CENPE|1062|centromere protein E, 312kDa##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4	0.997175	CTCF.p2:13:0.997
chr8	17010015	17010129	reg1013605.p1	9.213	+	TSC_hg19_v1_chr8_+_16884746 NM_181723 BC045553 EU832320 EU832405 BC032868	-125301	+	AB030648 AB590732 BC096720 BC098128 BC098153 BC098339 BC127125 BC141979 BC141980 BC137446 BC137447 AB044277 NM_019851	-150466	-	TSC_hg19_v1_chr8_-_16050222 NM_002445 NM_138715 NM_138716	-959813	-	TSC_hg19_v1_chr8_+_17013493 BC050272	3439	+	TSC_hg19_v1_chr8_+_17013805 AB023584 NM_016353	3762	+	TSC_hg19_v1_chr8_+_17014018 BC039253	3973	+	NM_181723|EFHA2|286097|EF-hand domain family, member A2##BC045553|EFHA2|286097|EF-hand domain family, member A2##EU832320|EFHA2|286097|EF-hand domain family, member A2##EU832405|EFHA2|286097|EF-hand domain family, member A2##BC032868|EFHA2|286097|EF-hand domain family, member A2##AB030648|FGF20|26281|fibroblast growth factor 20##BC096720|FGF20|26281|fibroblast growth factor 20##BC098128|FGF20|26281|fibroblast growth factor 20##BC098153|FGF20|26281|fibroblast growth factor 20##BC098339|FGF20|26281|fibroblast growth factor 20##BC127125|FGF20|26281|fibroblast growth factor 20##BC141979|FGF20|26281|fibroblast growth factor 20##BC141980|FGF20|26281|fibroblast growth factor 20##BC137446|FGF20|26281|fibroblast growth factor 20##BC137447|FGF20|26281|fibroblast growth factor 20##AB044277|FGF20|26281|fibroblast growth factor 20##NM_019851|FGF20|26281|fibroblast growth factor 20##NM_002445|MSR1|4481|macrophage scavenger receptor 1##NM_138715|MSR1|4481|macrophage scavenger receptor 1##NM_138716|MSR1|4481|macrophage scavenger receptor 1##BC050272|ZDHHC2|51201|zinc finger, DHHC-type containing 2##AB023584|ZDHHC2|51201|zinc finger, DHHC-type containing 2##NM_016353|ZDHHC2|51201|zinc finger, DHHC-type containing 2##BC039253|ZDHHC2|51201|zinc finger, DHHC-type containing 2	0.995204	CTCF.p2:8:0.995
chr14	61942089	61942233	reg1014045.p2	9.212	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-153634	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-193639	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-193967	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	220029	+	FJ790247 NM_001243084	222178	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	286958	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.994225	CTCF.p2:-15:0.994
chr15	58158503	58158624	reg1014182.p1	9.212	+	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	-159583	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	-159677	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	-274398	+	AB015228 AB015227 NM_170697	147676	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	199315	-	NM_001206897 NM_003888 NM_170696	199557	-	AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	0.066846	
chr2	143746972	143747116	reg1015607.p1	9.212	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-111804	+	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	-111838	+	AF176832 NM_018557	-857775	-	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	139886	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	139947	+	NM_024659	1247861	-	BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1	0.977424	CTCF.p2:20:0.977
chr9	86198216	86198323	reg1014132.p1	9.212	+	AK094281 EF560742 TSC_hg19_v1_chr9_-_86153270 AK297722 AK223597 NM_001244959 NM_174938 BC041376	-45064	-	NM_001244960 AY137774	-115610	-	BC037253 NM_001244961	-251394	-	BC142991 BC036421 BC045782 TSC_hg19_v1_chr9_+_86238057 NM_001001551 NM_001190727 AY615889	39711	+	AF176069 AF293384 AB528730 TSC_hg19_v1_chr9_-_86322601	124331	-	TSC_hg19_v1_chr9_-_86322844 BC010066	124578	-	AK094281|FRMD3|257019|FERM domain containing 3##EF560742|FRMD3|257019|FERM domain containing 3##AK297722|FRMD3|257019|FERM domain containing 3##AK223597|FRMD3|257019|FERM domain containing 3##NM_001244959|FRMD3|257019|FERM domain containing 3##NM_174938|FRMD3|257019|FERM domain containing 3##BC041376|FRMD3|257019|FERM domain containing 3##NM_001244960|FRMD3|257019|FERM domain containing 3##AY137774|FRMD3|257019|FERM domain containing 3##BC037253|FRMD3|257019|FERM domain containing 3##NM_001244961|FRMD3|257019|FERM domain containing 3##BC142991|C9orf103|414328|chromosome 9 open reading frame 103##BC036421|C9orf103|414328|chromosome 9 open reading frame 103##BC045782|C9orf103|414328|chromosome 9 open reading frame 103##NM_001001551|C9orf103|414328|chromosome 9 open reading frame 103##NM_001190727|C9orf103|414328|chromosome 9 open reading frame 103##AY615889|C9orf103|414328|chromosome 9 open reading frame 103##AF176069|UBQLN1|29979|ubiquilin 1##AF293384|UBQLN1|29979|ubiquilin 1##BC010066|UBQLN1|29979|ubiquilin 1	0.951517	CTCF.p2:-8:0.952
chr12	7033536	7033662	reg1015202.p1	9.211	+	AK290525 NM_001975 TSC_hg19_v1_chr12_+_7023743 AK312402 AK295220 BC002745 M22349	-9974	+	AK292367 NM_001135217 NM_006992 NM_201650 U72508 U72509 U72510 BC014450 AK292291 AK223535	-19583	+	BC071933 NM_001146316 BC002983 AK297963 AK310353 NM_032641	-51115	-	BC051795 NM_001007026	26	+	TSC_hg19_v1_chr12_+_7037385 NM_001940 D31840	3834	+	TSC_hg19_v1_chr12_+_7045476 AB209345	11857	+	AK290525|ENO2|2026|enolase 2 (gamma, neuronal)##NM_001975|ENO2|2026|enolase 2 (gamma, neuronal)##AK312402|ENO2|2026|enolase 2 (gamma, neuronal)##AK295220|ENO2|2026|enolase 2 (gamma, neuronal)##BC002745|ENO2|2026|enolase 2 (gamma, neuronal)##M22349|ENO2|2026|enolase 2 (gamma, neuronal)##AK292367|LRRC23|10233|leucine rich repeat containing 23##NM_001135217|LRRC23|10233|leucine rich repeat containing 23##NM_006992|LRRC23|10233|leucine rich repeat containing 23##NM_201650|LRRC23|10233|leucine rich repeat containing 23##U72508|LRRC23|10233|leucine rich repeat containing 23##U72509|LRRC23|10233|leucine rich repeat containing 23##U72510|LRRC23|10233|leucine rich repeat containing 23##BC014450|LRRC23|10233|leucine rich repeat containing 23##AK292291|LRRC23|10233|leucine rich repeat containing 23##AK223535|LRRC23|10233|leucine rich repeat containing 23##BC071933|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##NM_001146316|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##BC002983|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##AK297963|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##AK310353|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##NM_032641|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##BC051795|ATN1|1822|atrophin 1##NM_001007026|ATN1|1822|atrophin 1##NM_001940|ATN1|1822|atrophin 1##D31840|ATN1|1822|atrophin 1	0.862091	CTCF.p2:5:0.849
chr10	15251973	15252074	reg1013516.p1	9.210	+	BT007024 CU675371 DQ890667 DQ893848 BC006376 AK315085 AK094904 AF043325 TSC_hg19_v1_chr10_-_15210693 NM_004808	-41362	-	BC157831 BC171823 TSC_hg19_v1_chr10_-_15197364	-54668	-	TSC_hg19_v1_chr10_+_15139363 AK057006 U77664 BC029494	-112660	+	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	161126	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	509770	-	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	650468	-	BT007024|NMT2|9397|N-myristoyltransferase 2##DQ890667|NMT2|9397|N-myristoyltransferase 2##DQ893848|NMT2|9397|N-myristoyltransferase 2##BC006376|NMT2|9397|N-myristoyltransferase 2##AK315085|NMT2|9397|N-myristoyltransferase 2##AK094904|NMT2|9397|N-myristoyltransferase 2##AF043325|NMT2|9397|N-myristoyltransferase 2##NM_004808|NMT2|9397|N-myristoyltransferase 2##BC157831|LOC100192204|100192204|peptidylprolyl isomerase A (cyclophilin A) pseudogene##AK057006|RPP38|10557|ribonuclease P/MRP 38kDa subunit##U77664|RPP38|10557|ribonuclease P/MRP 38kDa subunit##BC029494|RPP38|10557|ribonuclease P/MRP 38kDa subunit##AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A	0.997066	CTCF.p2:-3:0.997
chr11	60524197	60524324	reg1013490.p2	9.210	+	AF237905 NM_031457 AK310969 AK310884 AK315901 BC022895 AK308413 AF350504 AK310872	-57128	+	AY324188 AY324189 AY324190 NM_001012417 NM_001100909 BC140799 BC171746	-241312	+	AK000224 AK309275 NM_001164470 NM_017716 BC029793	-264004	+	NM_001098835 NM_152717 AK300233 BC031610 AK091846 AX747218 AY584608 AY584609	149	+	AK122633 NM_206893 BC137259 BC137263	28585	+	NM_024098 TSC_hg19_v1_chr11_+_60609543 AK025974 AK302329 AK123775 BC001378 DQ892603 DQ895844 DQ501251	85261	+	AF237905|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_031457|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310969|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310884|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK315901|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##BC022895|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK308413|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AF350504|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310872|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AY324188|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324189|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324190|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001012417|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001100909|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC140799|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC171746|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AK000224|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_001164470|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_017716|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##BC029793|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_001098835|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##NM_152717|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK300233|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##BC031610|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK091846|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584608|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584609|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK122633|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_206893|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137259|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137263|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_024098|CCDC86|79080|coiled-coil domain containing 86##AK025974|CCDC86|79080|coiled-coil domain containing 86##AK302329|CCDC86|79080|coiled-coil domain containing 86##AK123775|CCDC86|79080|coiled-coil domain containing 86##BC001378|CCDC86|79080|coiled-coil domain containing 86##DQ892603|CCDC86|79080|coiled-coil domain containing 86##DQ895844|CCDC86|79080|coiled-coil domain containing 86##DQ501251|CCDC86|79080|coiled-coil domain containing 86	0.028597	
chr18	44576902	44577036	reg1013609.p2	9.210	+	AK314984 NM_016427 BC036022	-14990	-	NM_145653	-20521	-	BC103912 AB076840 AB464734 BC103913 EU446606 NM_001100817	-20759	-	TSC_hg19_v1_chr18_-_44676865 BC011894 AL136681 BC033031 AK054590 AK292098 BC038100 NM_032124	99902	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	125720	-	TSC_hg19_v1_chr18_-_44702734 AK027108	125764	-	AK314984|TCEB3B|51224|transcription elongation factor B polypeptide 3B (elongin A2)##NM_016427|TCEB3B|51224|transcription elongation factor B polypeptide 3B (elongin A2)##BC036022|TCEB3B|51224|transcription elongation factor B polypeptide 3B (elongin A2)##NM_145653|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##BC103912|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##AB076840|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##BC103913|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##EU446606|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##NM_001100817|TCEB3CL|728929|transcription elongation factor B polypeptide 3C-like##BC011894|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##AL136681|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##BC033031|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##AK054590|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##AK292098|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##BC038100|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##NM_032124|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1	0.215449	CTCF.p2:-20:0.215
chr8	145575218	145575330	reg1012316.p1	9.210	+	AB384867 AY014996 NM_031309	-15388	-	TSC_hg19_v1_chr8_-_145550553 AF059202 BC015762 BC023565 NM_012079	-24700	-	TSC_hg19_v1_chr8_-_145550516 BC150649	-24753	-	BC127764 BC141966 BC127763 BC150569 BC150570 NM_001252402 NM_001252404	3263	-	TSC_hg19_v1_chr8_-_145582133 AK026541 AK223088 NM_012162 NM_024555 BC033066	6896	-	TSC_hg19_v1_chr8_+_145582251 NM_001253816 AK027888 AK021918 AK291581 NM_001253815	6958	+	AY014996|SCRT1|83482|scratch homolog 1, zinc finger protein (Drosophila)##NM_031309|SCRT1|83482|scratch homolog 1, zinc finger protein (Drosophila)##AF059202|DGAT1|8694|diacylglycerol O-acyltransferase 1##BC015762|DGAT1|8694|diacylglycerol O-acyltransferase 1##BC023565|DGAT1|8694|diacylglycerol O-acyltransferase 1##NM_012079|DGAT1|8694|diacylglycerol O-acyltransferase 1##BC150649|DGAT1|8694|diacylglycerol O-acyltransferase 1##BC127764|C8ORFK29|340393|uncharacterized LOC340393##BC141966|C8ORFK29|340393|uncharacterized LOC340393##BC127763|C8ORFK29|340393|uncharacterized LOC340393##BC150569|C8ORFK29|340393|uncharacterized LOC340393##BC150570|C8ORFK29|340393|uncharacterized LOC340393##NM_001252402|C8ORFK29|340393|uncharacterized LOC340393##NM_001252404|C8ORFK29|340393|uncharacterized LOC340393##AK026541|FBXL6|26233|F-box and leucine-rich repeat protein 6##AK223088|FBXL6|26233|F-box and leucine-rich repeat protein 6##NM_012162|FBXL6|26233|F-box and leucine-rich repeat protein 6##NM_024555|FBXL6|26233|F-box and leucine-rich repeat protein 6##BC033066|FBXL6|26233|F-box and leucine-rich repeat protein 6##NM_001253816|GPR172A|79581|G protein-coupled receptor 172A##AK027888|GPR172A|79581|G protein-coupled receptor 172A##AK021918|GPR172A|79581|G protein-coupled receptor 172A##AK291581|GPR172A|79581|G protein-coupled receptor 172A##NM_001253815|GPR172A|79581|G protein-coupled receptor 172A	0.256958	CTCF.p2:13:0.257
chr9	127181930	127182055	reg1015792.p1	9.210	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	-4272	-	TSC_hg19_v1_chr9_+_127119114 BC042968	-62823	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	-127360	+	AY278562 NM_001161808	31430	+	TSC_hg19_v1_chr9_-_127269711 BC032501 NM_004959	87712	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	238712	+	BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144##BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)	0.963067	CTCF.p2:19:0.963
chr10	99801322	99801431	reg1010045.p1	9.209	+	AK057190 NM_001206528 NM_018058	-10792	-	AK292084 AJ276171 TSC_hg19_v1_chr10_-_99790379	-11014	-	BC110810 NM_001010917	-191382	+	NM_014472 AK292546 TSC_hg19_v1_chr10_+_99894414	93021	+	TSC_hg19_v1_chr10_+_99894427 AF525304 BC047908 BC098175 BC098268 BC098359 BC099848	93059	+	TSC_hg19_v1_chr10_-_100027952 AK172781 BC013153 BC035470 NM_032211	226616	-	AK057190|CRTAC1|55118|cartilage acidic protein 1##NM_001206528|CRTAC1|55118|cartilage acidic protein 1##NM_018058|CRTAC1|55118|cartilage acidic protein 1##AK292084|CRTAC1|55118|cartilage acidic protein 1##AJ276171|CRTAC1|55118|cartilage acidic protein 1##BC110810|GOLGA7B|401647|golgin A7 family, member B##NM_001010917|GOLGA7B|401647|golgin A7 family, member B##NM_014472|C10orf28|27291|chromosome 10 open reading frame 28##AK292546|C10orf28|27291|chromosome 10 open reading frame 28##AF525304|C10orf28|27291|chromosome 10 open reading frame 28##BC047908|C10orf28|27291|chromosome 10 open reading frame 28##BC098175|C10orf28|27291|chromosome 10 open reading frame 28##BC098268|C10orf28|27291|chromosome 10 open reading frame 28##BC098359|C10orf28|27291|chromosome 10 open reading frame 28##BC099848|C10orf28|27291|chromosome 10 open reading frame 28##AK172781|LOXL4|84171|lysyl oxidase-like 4##BC013153|LOXL4|84171|lysyl oxidase-like 4##BC035470|LOXL4|84171|lysyl oxidase-like 4##NM_032211|LOXL4|84171|lysyl oxidase-like 4	0.998313	CTCF.p2:14:0.998
chr2	136673943	136674076	reg1015904.p1	9.209	+	AK299236 TSC_hg19_v1_chr2_-_136634035 NM_005915 AK303455	-39978	-	CU689360 BC020268 BC032374 TSC_hg19_v1_chr2_-_136633997 U46838 AK312575 BC008774 D84557	-40044	-	NM_002299 X07994	-79260	-	BT006710 CU674308 DQ890741 DQ893912 TSC_hg19_v1_chr2_-_136743053 CR749809 BC107749 AY762100	69046	-	TSC_hg19_v1_chr2_-_136743143 AK222476 BC000629 AK290607 J05032	69120	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	69207	-	AK299236|MCM6|4175|minichromosome maintenance complex component 6##NM_005915|MCM6|4175|minichromosome maintenance complex component 6##AK303455|MCM6|4175|minichromosome maintenance complex component 6##BC020268|MCM6|4175|minichromosome maintenance complex component 6##BC032374|MCM6|4175|minichromosome maintenance complex component 6##U46838|MCM6|4175|minichromosome maintenance complex component 6##AK312575|MCM6|4175|minichromosome maintenance complex component 6##BC008774|MCM6|4175|minichromosome maintenance complex component 6##D84557|MCM6|4175|minichromosome maintenance complex component 6##NM_002299|LCT|3938|lactase##X07994|LCT|3938|lactase##BT006710|DARS|1615|aspartyl-tRNA synthetase##DQ890741|DARS|1615|aspartyl-tRNA synthetase##DQ893912|DARS|1615|aspartyl-tRNA synthetase##CR749809|DARS|1615|aspartyl-tRNA synthetase##BC107749|DARS|1615|aspartyl-tRNA synthetase##AY762100|DARS|1615|aspartyl-tRNA synthetase##AK222476|DARS|1615|aspartyl-tRNA synthetase##BC000629|DARS|1615|aspartyl-tRNA synthetase##AK290607|DARS|1615|aspartyl-tRNA synthetase##J05032|DARS|1615|aspartyl-tRNA synthetase##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase	0.754168	CTCF.p2:-10:0.754
chr2	58798498	58798643	reg1015942.p1	9.209	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-330088	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-524582	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-524816	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	1981952	-	AF080216 TSC_hg19_v1_chr2_-_60780784	1982208	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	2184914	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.194503	
chr5	174337348	174337469	reg1013159.p1	9.209	+	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	-185796	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-864656	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	-864697	+	NM_000794	533754	-	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	568154	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	747630	+	NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##NM_000794|DRD1|1812|dopamine receptor D1##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2	0.997378	CTCF.p2:-7:0.997
chr6	50783925	50784063	reg1013888.p3	9.209	+	AY028376 NM_172238	-102738	+	DQ012016 NM_001037498	-767631	-	DQ012014 DQ012015 NM_001037497 NM_001037728	-794324	-	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	2541	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	1168401	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	1267212	+	AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##DQ012014|DEFB110|245913|defensin, beta 110 locus##DQ012015|DEFB110|245913|defensin, beta 110 locus##NM_001037497|DEFB110|245913|defensin, beta 110 locus##NM_001037728|DEFB110|245913|defensin, beta 110 locus##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A	0.30601	CTCF.p2:-3:0.306
chr1	166227396	166227523	reg1013827.p1	9.208	+	TSC_hg19_v1_chr1_-_166136076 BC114214	-91319	-	TSC_hg19_v1_chr1_-_166135982 AB593134	-91474	-	TSC_hg19_v1_chr1_-_166135951 NM_001017961	-91505	-	AK293946 AK299537 TSC_hg19_v1_chr1_+_166808680	581233	+	TSC_hg19_v1_chr1_+_166808734 AB040946 NM_017542 AK056711 BC131624	581286	+	AB590621 EU446601 AK290964 TSC_hg19_v1_chr1_-_166845502 BC015401 AK309250	618039	-	BC114214|FAM78B|149297|family with sequence similarity 78, member B##NM_001017961|FAM78B|149297|family with sequence similarity 78, member B##AK293946|POGK|57645|pogo transposable element with KRAB domain##AK299537|POGK|57645|pogo transposable element with KRAB domain##AB040946|POGK|57645|pogo transposable element with KRAB domain##NM_017542|POGK|57645|pogo transposable element with KRAB domain##AK056711|POGK|57645|pogo transposable element with KRAB domain##BC131624|POGK|57645|pogo transposable element with KRAB domain##EU446601|TADA1|117143|transcriptional adaptor 1##AK290964|TADA1|117143|transcriptional adaptor 1##BC015401|TADA1|117143|transcriptional adaptor 1##AK309250|TADA1|117143|transcriptional adaptor 1	0.0	
chr13	24473807	24473931	reg1014740.p1	9.208	+	NM_001007537 CU691876 BC137004 BC137006 BC144450	-2711	-	NM_001135816 BC142999	-10277	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	-10355	-	BX648445 TSC_hg19_v1_chr13_+_24553892	79996	+	TSC_hg19_v1_chr13_+_24553943 BX648244 BC043582	80064	+	TSC_hg19_v1_chr13_+_24734858 AK092754 AX747708 NM_001166271 NM_153023 AK055770	261026	+	NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##BX648244|SPATA13|221178|spermatogenesis associated 13##AK092754|SPATA13|221178|spermatogenesis associated 13##NM_001166271|SPATA13|221178|spermatogenesis associated 13##NM_153023|SPATA13|221178|spermatogenesis associated 13##AK055770|SPATA13|221178|spermatogenesis associated 13	0.998654	CTCF.p2:14:0.999
chr14	99786488	99786636	reg1015540.p1	9.208	+	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	-48672	-	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	-48945	-	AK098639 NM_182560	-608613	+	BC120967 BC120968 BC127624 BC127625 TSC_hg19_v1_chr14_-_99947104	160532	-	TSC_hg19_v1_chr14_-_99947132 BC066931 BX161441	160560	-	TSC_hg19_v1_chr14_-_99947170 BC037395	160617	-	AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##BC120967|SETD3|84193|SET domain containing 3##BC120968|SETD3|84193|SET domain containing 3##BC127624|SETD3|84193|SET domain containing 3##BC127625|SETD3|84193|SET domain containing 3##BC066931|SETD3|84193|SET domain containing 3##BX161441|SETD3|84193|SET domain containing 3##BC037395|SETD3|84193|SET domain containing 3	0.999888	CTCF.p2:6:1.000
chr16	2590196	2590322	reg1013789.p2	9.208	+	BC033494 TSC_hg19_v1_chr16_+_2588066 AB463382 DQ892297 DQ895496 EU832784 GQ129441 CU689632 CR536517 BC040324	-2152	+	AK131060 AK222581 AK293900 TSC_hg19_v1_chr16_+_2588021 AF017995 Y15056	-2224	+	TSC_hg19_v1_chr16_+_2588020 BC006339 BC012103	-2249	+	AK096394 TSC_hg19_v1_chr16_+_2653445 BC093998 BC111952 AK291606 BC062576 BC036664 BC056242 BC105289 BC080650	63158	+	BC063714 TSC_hg19_v1_chr16_-_2723400 AK091794 AX747190 BC043252	133146	-	TSC_hg19_v1_chr16_+_2732524 NM_018992 AK000047	142240	+	BC033494|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##DQ892297|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##DQ895496|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##EU832784|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##GQ129441|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##CR536517|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##BC040324|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK131060|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK222581|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK293900|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AF017995|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##Y15056|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##BC006339|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##BC012103|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK096394|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC093998|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC111952|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##AK291606|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC062576|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC036664|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC056242|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC105289|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC080650|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##AK091794|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##AX747190|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##BC043252|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##NM_018992|KCTD5|54442|potassium channel tetramerisation domain containing 5##AK000047|KCTD5|54442|potassium channel tetramerisation domain containing 5	0.399352	CTCF.p2:-7:0.399
chr20	20064590	20064727	reg1015272.p1	9.208	+	NM_001167816 AL117439	-27338	+	BC144222 AF255443 AF318303 AF318304 AF318305 NM_016652	-27971	-	AK307817 NM_015585 AK304174 BC028708	-31482	+	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	284096	+	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	628570	-	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	1042006	+	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AK307817|C20orf26|26074|chromosome 20 open reading frame 26##NM_015585|C20orf26|26074|chromosome 20 open reading frame 26##AK304174|C20orf26|26074|chromosome 20 open reading frame 26##BC028708|C20orf26|26074|chromosome 20 open reading frame 26##M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1	0.88916	CTCF.p2:-12:0.889
chr22	32343389	32343500	reg1013559.p1	9.208	+	AJ704765 AJ704766 AL050256 NM_015372 AK315264	-2123	-	TSC_hg19_v1_chr22_+_32340608 AK312650 CR456612 AB385077 L20422 CU013208 CU013496	-2789	+	TSC_hg19_v1_chr22_+_32340520 NM_003405 X78138 BC003047 S80794	-2956	+	DQ656053 NM_000343 TSC_hg19_v1_chr22_+_32439037	95585	+	TSC_hg19_v1_chr22_+_32439103 AK312948	95669	+	TSC_hg19_v1_chr22_+_32439229 CR456579	95779	+	AJ704765|C22orf24|25775|chromosome 22 open reading frame 24##AJ704766|C22orf24|25775|chromosome 22 open reading frame 24##AL050256|C22orf24|25775|chromosome 22 open reading frame 24##NM_015372|C22orf24|25775|chromosome 22 open reading frame 24##AK315264|C22orf24|25775|chromosome 22 open reading frame 24##AK312650|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CR456612|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##L20422|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CU013208|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CU013496|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##NM_003405|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##X78138|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##BC003047|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##S80794|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##DQ656053|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##NM_000343|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##AK312948|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CR456579|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1	0.38085	CTCF.p2:13:0.381
chr14	24801492	24801608	reg1011804.p2	9.207	+	NM_181657	-19238	+	TSC_hg19_v1_chr14_+_24780707 D89079 NM_001143919 U41070	-20856	+	TSC_hg19_v1_chr14_-_24780642 AK122828	-20901	-	BX248285 BC027943 AK122714 AK126468 NM_001198568 NM_001198592 NM_139247 TSC_hg19_v1_chr14_-_24804278	2715	-	AF156884 AY453693 AY494982 AY494983 CU692020 TSC_hg19_v1_chr14_-_24809197 BC062584 AK296309 BC041668 AK296140 AK075275 NM_006871	7589	-	AK310445 EU887632 EU887633 EU887634 NM_001136022 NM_001198967	34594	+	NM_181657|LTB4R|1241|leukotriene B4 receptor##D89079|LTB4R|1241|leukotriene B4 receptor##NM_001143919|LTB4R|1241|leukotriene B4 receptor##U41070|LTB4R|1241|leukotriene B4 receptor##AK122828|CIDEB|27141|cell death-inducing DFFA-like effector b##BX248285|ADCY4|196883|adenylate cyclase 4##BC027943|ADCY4|196883|adenylate cyclase 4##AK122714|ADCY4|196883|adenylate cyclase 4##AK126468|ADCY4|196883|adenylate cyclase 4##NM_001198568|ADCY4|196883|adenylate cyclase 4##NM_001198592|ADCY4|196883|adenylate cyclase 4##NM_139247|ADCY4|196883|adenylate cyclase 4##AF156884|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY453693|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494982|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494983|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC062584|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296309|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC041668|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296140|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK075275|RIPK3|11035|receptor-interacting serine-threonine kinase 3##NM_006871|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK310445|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887632|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887633|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887634|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001136022|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198967|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4	0.566268	CTCF.p2:-1:0.566
chr2	148695456	148695572	reg1013584.p2	9.207	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	-92869	+	TSC_hg19_v1_chr2_+_148602300 AK314124	-93179	+	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	-93397	+	TSC_hg19_v1_chr2_-_148778310 AK225092 BC005388 AF022108 AF047598 AF132596 BC014847 AK295721 AK291989 AK294878 AK298862 NM_001190882 NM_001190879 AK299749 NM_002552 NM_001190881 NM_181741	82848	-	TSC_hg19_v1_chr2_+_148778636 NM_018328 EF542797	83095	+	NM_181742	83658	-	BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK225092|ORC4|5000|origin recognition complex, subunit 4##BC005388|ORC4|5000|origin recognition complex, subunit 4##AF022108|ORC4|5000|origin recognition complex, subunit 4##AF047598|ORC4|5000|origin recognition complex, subunit 4##AF132596|ORC4|5000|origin recognition complex, subunit 4##BC014847|ORC4|5000|origin recognition complex, subunit 4##AK295721|ORC4|5000|origin recognition complex, subunit 4##AK291989|ORC4|5000|origin recognition complex, subunit 4##AK294878|ORC4|5000|origin recognition complex, subunit 4##AK298862|ORC4|5000|origin recognition complex, subunit 4##NM_001190882|ORC4|5000|origin recognition complex, subunit 4##NM_001190879|ORC4|5000|origin recognition complex, subunit 4##AK299749|ORC4|5000|origin recognition complex, subunit 4##NM_002552|ORC4|5000|origin recognition complex, subunit 4##NM_001190881|ORC4|5000|origin recognition complex, subunit 4##NM_181741|ORC4|5000|origin recognition complex, subunit 4##NM_018328|MBD5|55777|methyl-CpG binding domain protein 5##EF542797|MBD5|55777|methyl-CpG binding domain protein 5##NM_181742|ORC4|5000|origin recognition complex, subunit 4	0.988182	CTCF.p2:-6:0.988
chr1	65896924	65897030	reg1015208.p1	9.206	+	TSC_hg19_v1_chr1_+_65886400 NM_001003679 NM_001003680 NM_002303 U43168 U66495 U66496 Y12670 AK074841 AK290208 BC056250 AK094801 AK309370 NM_001198681 BC131779 EU832353 EU832438 CR541647 CR541737 U66497	-10615	+	BC140007 NM_001198683 NM_017526 TSC_hg19_v1_chr1_+_65886266	-10775	+	AK296408 NM_014787 AB007942	-166548	+	TSC_hg19_v1_chr1_+_65991358 BC031086 NM_001198687 NM_001198688 NM_001198689	94393	+	TSC_hg19_v1_chr1_+_65991390 U52912 U52913 U52914	94430	+	NM_001037341 CR749667 BC071607 BC036108	361218	+	NM_001003679|LEPR|3953|leptin receptor##NM_001003680|LEPR|3953|leptin receptor##NM_002303|LEPR|3953|leptin receptor##U43168|LEPR|3953|leptin receptor##U66495|LEPR|3953|leptin receptor##U66496|LEPR|3953|leptin receptor##Y12670|LEPROT|54741|leptin receptor overlapping transcript##AK074841|LEPROT|54741|leptin receptor overlapping transcript##AK290208|LEPR|3953|leptin receptor##BC056250|LEPROT|54741|leptin receptor overlapping transcript##AK094801|LEPROT|54741|leptin receptor overlapping transcript##AK309370|LEPROT|54741|leptin receptor overlapping transcript##NM_001198681|LEPROT|54741|leptin receptor overlapping transcript##BC131779|LEPR|3953|leptin receptor##EU832353|LEPROT|54741|leptin receptor overlapping transcript##EU832438|LEPROT|54741|leptin receptor overlapping transcript##CR541647|LEPROT|54741|leptin receptor overlapping transcript##CR541737|LEPROT|54741|leptin receptor overlapping transcript##U66497|LEPR|3953|leptin receptor##BC140007|LEPROT|54741|leptin receptor overlapping transcript##NM_001198683|LEPROT|54741|leptin receptor overlapping transcript##NM_017526|LEPROT|54741|leptin receptor overlapping transcript##AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##BC031086|LEPR|3953|leptin receptor##NM_001198687|LEPR|3953|leptin receptor##NM_001198688|LEPR|3953|leptin receptor##NM_001198689|LEPR|3953|leptin receptor##U52912|LEPR|3953|leptin receptor##U52913|LEPR|3953|leptin receptor##U52914|LEPR|3953|leptin receptor##NM_001037341|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##CR749667|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC071607|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC036108|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	0.988874	CTCF.p2:0:0.989
chr4	118998509	118998611	reg1013219.p1	9.206	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	-42985	+	TSC_hg19_v1_chr4_+_118954764 AY358852	-43789	+	AK074617 BC030831 NM_152402	-991827	-	TSC_hg19_v1_chr4_+_119199912 BC017993 BC039555	201357	+	TSC_hg19_v1_chr4_-_119273910 AJ001531 BC007761 NM_003619	275365	-	TSC_hg19_v1_chr4_+_119512929 AK024248	514374	+	AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC017993|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##BC039555|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##AJ001531|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC007761|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##NM_003619|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##AK024248|LOC729218|729218|uncharacterized LOC729218	0.952788	CTCF.p2:0:0.953
chr9	131397612	131397741	reg1016226.p1	9.206	+	TSC_hg19_v1_chr9_+_131388703 AK309836 AK310696	-8933	+	X86901 TSC_hg19_v1_chr9_+_131388179	-9498	+	TSC_hg19_v1_chr9_+_131314868 NM_001130438 NM_001195532 NM_003127 AK294753 AK300386 AK307676 BC034956 AB191262 AB209860 BC051801 J05243 BC053521 U83867	-82886	+	TSC_hg19_v1_chr9_-_131418938 BC001614	21287	-	TSC_hg19_v1_chr9_-_131419024 BC011874 NM_052844	21390	-	NM_001122821 TSC_hg19_v1_chr9_+_131446071 AK300794	48328	+	AK309836|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AK310696|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##X86901|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##NM_001130438|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##NM_001195532|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##NM_003127|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AK294753|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AK300386|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AK307676|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##BC034956|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AB191262|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AB209860|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##BC051801|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##J05243|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##BC053521|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##U83867|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##BC001614|WDR34|89891|WD repeat domain 34##BC011874|WDR34|89891|WD repeat domain 34##NM_052844|WDR34|89891|WD repeat domain 34##NM_001122821|SET|6418|SET nuclear oncogene##AK300794|SET|6418|SET nuclear oncogene	0.988711	CTCF.p2:-2:0.989
chr5	159414483	159414615	reg1015692.p1	9.205	+	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	-70724	+	BC074723 M65272 NM_002187	-657075	-	TSC_hg19_v1_chr5_+_158690297 AY444562 AK057996 BC013425	-724263	+	TSC_hg19_v1_chr5_+_159436145 AK315262	21598	+	AK222641 TSC_hg19_v1_chr5_+_159436161 AK222984 NM_003314 U46570	21618	+	TSC_hg19_v1_chr5_-_159546405 AB067522 BC035076 BC105110 BC143437 NM_001130864 NM_052927	131910	-	NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC074723|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##M65272|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_002187|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##AY444562|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK057996|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##BC013425|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK315262|TTC1|7265|tetratricopeptide repeat domain 1##AK222641|TTC1|7265|tetratricopeptide repeat domain 1##AK222984|TTC1|7265|tetratricopeptide repeat domain 1##NM_003314|TTC1|7265|tetratricopeptide repeat domain 1##U46570|TTC1|7265|tetratricopeptide repeat domain 1##AB067522|PWWP2A|114825|PWWP domain containing 2A##BC035076|PWWP2A|114825|PWWP domain containing 2A##BC105110|PWWP2A|114825|PWWP domain containing 2A##BC143437|PWWP2A|114825|PWWP domain containing 2A##NM_001130864|PWWP2A|114825|PWWP domain containing 2A##NM_052927|PWWP2A|114825|PWWP domain containing 2A	0.956524	CTCF.p2:10:0.957
chr7	33498990	33499124	reg1010543.p1	9.205	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-329976	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-350080	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-396735	-	AK289963 NM_133468 AK096150 BC060868	446085	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	1198862	+	DQ287932 NM_015283	1578595	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	0.356027	CTCF.p2:-20:0.356
chr2	139544746	139544878	reg1014574.p1	9.203	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-7006	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-285322	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-285419	+	TSC_hg19_v1_chr2_-_142888540 AK054663	3343744	-	AF176832 NM_018557	3344457	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	4090394	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.844668	CTCF.p2:10:0.845
chr1	182755938	182756047	reg1013959.p1	9.202	+	BC069677 BC069718 BC103865 BC103866 BC103867 AF297015 NM_001102450 NM_033345	-113951	-	AF493937 BT006638 CU675307 AB528682 U94829 U70426 BC006243 TSC_hg19_v1_chr1_-_182573525 AK301261 AK311880 NM_002928	-182522	-	CU675308 TSC_hg19_v1_chr1_+_182569465	-186546	+	NM_001200050 NM_001200051 NM_001200052 NM_001200056 NM_030769 BC042003	2592	+	BC034966 AK313225 BC058003 TSC_hg19_v1_chr1_+_182758907 AK297017 AK301068 AY336748	2899	+	TSC_hg19_v1_chr1_+_182808450 NM_001357 AK226102	52465	+	BC069677|RGS8|85397|regulator of G-protein signaling 8##BC069718|RGS8|85397|regulator of G-protein signaling 8##BC103865|RGS8|85397|regulator of G-protein signaling 8##BC103866|RGS8|85397|regulator of G-protein signaling 8##BC103867|RGS8|85397|regulator of G-protein signaling 8##AF297015|RGS8|85397|regulator of G-protein signaling 8##NM_001102450|RGS8|85397|regulator of G-protein signaling 8##NM_033345|RGS8|85397|regulator of G-protein signaling 8##AF493937|RGS16|6004|regulator of G-protein signaling 16##BT006638|RGS16|6004|regulator of G-protein signaling 16##U94829|RGS16|6004|regulator of G-protein signaling 16##U70426|RGS16|6004|regulator of G-protein signaling 16##BC006243|RGS16|6004|regulator of G-protein signaling 16##AK301261|RGS16|6004|regulator of G-protein signaling 16##AK311880|RGS16|6004|regulator of G-protein signaling 16##NM_002928|RGS16|6004|regulator of G-protein signaling 16##NM_001200050|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200051|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200052|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200056|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_030769|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC042003|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC034966|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK313225|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC058003|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK297017|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK301068|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AY336748|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	0.927254	CTCF.p2:13:0.927
chr1	35332044	35332188	reg1016040.p1	9.202	+	BC141907 TSC_hg19_v1_chr1_+_35331580	-559	+	BX648912 BC107421 NM_001164825 TSC_hg19_v1_chr1_-_35325339 BC011880 BC073851 AK074853 BC064320 NM_138428	-6741	-	NM_001164824 BC034598	-7459	-	NM_001080418 AB527430	38868	-	TSC_hg19_v1_chr1_-_35450919 CU688652 BC042172 BC029439	118794	-	TSC_hg19_v1_chr1_-_35450927 AK129824	118809	-	BX648912|C1orf212|113444|chromosome 1 open reading frame 212##BC107421|C1orf212|113444|chromosome 1 open reading frame 212##NM_001164825|C1orf212|113444|chromosome 1 open reading frame 212##BC011880|C1orf212|113444|chromosome 1 open reading frame 212##BC073851|C1orf212|113444|chromosome 1 open reading frame 212##AK074853|C1orf212|113444|chromosome 1 open reading frame 212##BC064320|C1orf212|113444|chromosome 1 open reading frame 212##NM_138428|C1orf212|113444|chromosome 1 open reading frame 212##NM_001164824|C1orf212|113444|chromosome 1 open reading frame 212##BC034598|C1orf212|113444|chromosome 1 open reading frame 212##NM_001080418|DLGAP3|58512|discs, large (Drosophila) homolog-associated protein 3##BC029439|ZMYM6NB|100506144|ZMYM6 neighbor##AK129824|ZMYM6NB|100506144|ZMYM6 neighbor	0.999097	CTCF.p2:12:0.999
chr18	39486743	39486888	reg1016192.p1	9.202	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-2106547	-	TSC_hg19_v1_chr18_-_36915657 D28405	-2571159	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	-4340816	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	48384	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	48418	+	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	1208754	-	AK090603|LOC647946|647946|uncharacterized LOC647946##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2	0.989397	CTCF.p2:15:0.989
chr1	94316436	94316542	reg1012336.p2	9.202	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	-169162	-	TSC_hg19_v1_chr1_+_94057602 BC084562	-258882	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-258949	+	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	28225	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	28259	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	58473	-	U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit	0.830068	CTCF.p2:3:0.830
chr3	155524058	155524171	reg1012086.p1	9.202	+	BC042198 AF115515 TSC_hg19_v1_chr3_-_155524068 BC064898 AK055701 NM_173657 AL832165 AK289890	-53	-	BC113950 NM_014996	-102118	-	NM_001130960 NM_001130961 TSC_hg19_v1_chr3_-_155394133 AK096620	-129960	-	D88152 TSC_hg19_v1_chr3_-_155572196 BC014416 AK312268 NM_001190992 NM_004733	48092	-	TSC_hg19_v1_chr3_+_155588290 NM_003875	64187	+	TSC_hg19_v1_chr3_+_155588438 AK302148 AK223399 AK300787	64320	+	BC042198|C3orf33|285315|chromosome 3 open reading frame 33##AF115515|C3orf33|285315|chromosome 3 open reading frame 33##BC064898|C3orf33|285315|chromosome 3 open reading frame 33##AK055701|C3orf33|285315|chromosome 3 open reading frame 33##NM_173657|C3orf33|285315|chromosome 3 open reading frame 33##AL832165|C3orf33|285315|chromosome 3 open reading frame 33##AK289890|C3orf33|285315|chromosome 3 open reading frame 33##BC113950|PLCH1|23007|phospholipase C, eta 1##NM_014996|PLCH1|23007|phospholipase C, eta 1##NM_001130960|PLCH1|23007|phospholipase C, eta 1##NM_001130961|PLCH1|23007|phospholipase C, eta 1##AK096620|PLCH1|23007|phospholipase C, eta 1##D88152|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##BC014416|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##AK312268|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##NM_001190992|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##NM_004733|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##NM_003875|GMPS|8833|guanine monphosphate synthetase##AK302148|GMPS|8833|guanine monphosphate synthetase##AK223399|GMPS|8833|guanine monphosphate synthetase##AK300787|GMPS|8833|guanine monphosphate synthetase	0.467909	CTCF.p2:-25:0.468
chr11	132811057	132811199	reg1015663.p1	9.201	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1029789	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-1030504	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-1570659	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	1886	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	2477	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	591186	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.128314	
chr5	162835557	162835695	reg1014322.p1	9.201	+	NM_000816 NM_198903 NM_198904 BC052926 BC036030 X15376 BC059389 BC069348 BC074795 AK315200 AK299640	-1340781	+	NM_001127648 AB590312 DQ890915	-1557867	+	NM_001127647	-1558235	+	TSC_hg19_v1_chr5_+_162864606 AK316234 NM_004060 NM_199246 AK297190 AK312913 BC007093 BX538035 D78341 L49504 BC000196	28995	+	AB528197 AM392736 AM393438 FJ215684 AK094647 TSC_hg19_v1_chr5_-_162887097	51452	-	AK311957 TSC_hg19_v1_chr5_-_162887119 BC017934 BX538290 NM_145266	51507	-	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127647|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK316234|CCNG1|900|cyclin G1##NM_004060|CCNG1|900|cyclin G1##NM_199246|CCNG1|900|cyclin G1##AK297190|CCNG1|900|cyclin G1##AK312913|CCNG1|900|cyclin G1##BC007093|CCNG1|900|cyclin G1##BX538035|CCNG1|900|cyclin G1##D78341|CCNG1|900|cyclin G1##L49504|CCNG1|900|cyclin G1##BC000196|CCNG1|900|cyclin G1##AM392736|NUDCD2|134492|NudC domain containing 2##AM393438|NUDCD2|134492|NudC domain containing 2##FJ215684|NUDCD2|134492|NudC domain containing 2##AK311957|NUDCD2|134492|NudC domain containing 2##BC017934|NUDCD2|134492|NudC domain containing 2##BX538290|NUDCD2|134492|NudC domain containing 2##NM_145266|NUDCD2|134492|NudC domain containing 2	0.996691	CTCF.p2:20:0.997
chr5	172710948	172711067	reg1013721.p1	9.201	+	AB021133 CU693024 AB464641 DQ893313 DQ894104 DQ896627 BC025711 AK290615 AK307249 AK297844 AK307218 AK309495 U34962 AK307247 NM_001166175 NM_001166176 NM_004387	-48808	-	NM_001205 NM_013978 NM_013979 NM_013980 BC010959 TSC_hg19_v1_chr5_+_172571536 AF083957 AF083958 U15172 AB527856 CU679862 AF083956 AY216799	-139511	+	TSC_hg19_v1_chr5_+_172484383 AK297424	-226624	+	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	44255	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	44436	-	AK095891 NM_003714	45498	-	AB021133|NKX2-5|1482|NK2 homeobox 5##DQ893313|NKX2-5|1482|NK2 homeobox 5##DQ894104|NKX2-5|1482|NK2 homeobox 5##DQ896627|NKX2-5|1482|NK2 homeobox 5##BC025711|NKX2-5|1482|NK2 homeobox 5##AK290615|NKX2-5|1482|NK2 homeobox 5##AK307249|NKX2-5|1482|NK2 homeobox 5##AK297844|NKX2-5|1482|NK2 homeobox 5##AK307218|NKX2-5|1482|NK2 homeobox 5##AK309495|NKX2-5|1482|NK2 homeobox 5##U34962|NKX2-5|1482|NK2 homeobox 5##AK307247|NKX2-5|1482|NK2 homeobox 5##NM_001166175|NKX2-5|1482|NK2 homeobox 5##NM_001166176|NKX2-5|1482|NK2 homeobox 5##NM_004387|NKX2-5|1482|NK2 homeobox 5##NM_001205|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013978|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013979|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013980|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##BC010959|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083957|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083958|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##U15172|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083956|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AY216799|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AK297424|C5orf41|153222|chromosome 5 open reading frame 41##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2##AK095891|STC2|8614|stanniocalcin 2##NM_003714|STC2|8614|stanniocalcin 2	0.518483	CTCF.p2:7:0.518
chr6	26596109	26596244	reg1012938.p2	9.201	+	TSC_hg19_v1_chr6_+_26538630 NM_006353 AK311841 BC001282	-57546	+	U39576 BC096312 BC096313 BC096314 BC096315 NM_001732	-94705	+	NM_001197234 NM_007049 NM_078476 TSC_hg19_v1_chr6_+_26458182 AK297098 NM_001197233 BC016661 AB209777 U90543	-137986	+	TSC_hg19_v1_chr6_+_26597203 NM_013375 BC066313 BC048812 AB027258 AB463399 CU688138 CU690582 EU446795	1031	+	TSC_hg19_v1_chr6_-_26659967 NM_001242797 NM_001242798 NM_001242799 NM_024639	63776	-	AB591038 BC014312 TSC_hg19_v1_chr6_-_27100575 NM_021058 AK311849	504389	-	NM_006353|HMGN4|10473|high mobility group nucleosomal binding domain 4##AK311841|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC001282|HMGN4|10473|high mobility group nucleosomal binding domain 4##U39576|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096312|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096313|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096314|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096315|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001732|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001197234|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_007049|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_078476|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AK297098|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_001197233|BTN2A1|11120|butyrophilin, subfamily 2, member A1##BC016661|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AB209777|BTN2A1|11120|butyrophilin, subfamily 2, member A1##U90543|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_013375|ABT1|29777|activator of basal transcription 1##BC066313|ABT1|29777|activator of basal transcription 1##BC048812|ABT1|29777|activator of basal transcription 1##AB027258|ABT1|29777|activator of basal transcription 1##EU446795|ABT1|29777|activator of basal transcription 1##NM_001242797|ZNF322|79692|zinc finger protein 322##NM_001242798|ZNF322|79692|zinc finger protein 322##NM_001242799|ZNF322|79692|zinc finger protein 322##NM_024639|ZNF322|79692|zinc finger protein 322##BC014312|HIST1H2BJ|8970|histone cluster 1, H2bj##NM_021058|HIST1H2BJ|8970|histone cluster 1, H2bj##AK311849|HIST1H2BJ|8970|histone cluster 1, H2bj	1.027204	CTCF.p2:1:1.000
chr7	144435943	144436060	reg1013244.p1	9.201	+	NM_001080413 AB528776	-328682	-	AK160365 TSC_hg19_v1_chr7_+_144052469 NM_005435 CR749203 BC136661	-383498	+	NM_001001802 NM_001005287	-420784	+	TSC_hg19_v1_chr7_-_144533086 AK091736	97088	-	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	97135	-	NM_014141	1377451	+	NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_001001802|OR2A42|402317|olfactory receptor, family 2, subfamily A, member 42##NM_001005287|OR2A1|346528|olfactory receptor, family 2, subfamily A, member 1##AK091736|TPK1|27010|thiamin pyrophosphokinase 1##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##NM_014141|CNTNAP2|26047|contactin associated protein-like 2	0.581618	CTCF.p2:-2:0.569
chr15	81626339	81626455	reg1013009.p1	9.200	+	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	-9903	-	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	-37093	+	NM_172217 AY324389	-108708	+	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	40088	-	AK094145 TSC_hg19_v1_chr15_-_82336883	710486	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	711969	-	AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##NM_172217|IL16|3603|interleukin 16##AY324389|IL16|3603|interleukin 16##NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)	0.0	
chr17	36631128	36631225	reg1013119.p1	9.200	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	-46471	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	-123313	+	AY584611 NM_001004334	-131484	-	TSC_hg19_v1_chr17_-_36729122 AK295027	97946	-	BC029278 TSC_hg19_v1_chr17_-_36760969	129762	-	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	131020	-	NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1	0.78362	CTCF.p2:11:0.784
chr12	14391235	14391393	reg1012660.p1	9.199	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-258328	-	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-1041585	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-1041597	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	127321	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	146958	+	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	329295	-	BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1	0.974505	CTCF.p2:8:0.975
chr14	88211999	88212103	reg1012419.p1	9.199	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-2212466	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-2215510	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-2215578	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	247412	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	247508	-	NM_001201402	247957	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	0.946994	CTCF.p2:1:0.947
chr5	95937566	95937665	reg1012963.p1	9.199	+	AB208874 AB590528 BC130295 BC136486 TSC_hg19_v1_chr5_-_95768927 X64810 M90753 BC031211 NM_000439	-168793	-	AK303888 NM_001177875	-169753	-	AK308575 NM_001177876	-188927	-	TSC_hg19_v1_chr5_+_95997755 NM_001190442 AB208816	60136	+	TSC_hg19_v1_chr5_+_95997965 BC016066 NM_001042440	60313	+	BC013579 TSC_hg19_v1_chr5_+_95998220	60580	+	AB208874|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC130295|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC136486|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##X64810|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##M90753|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC031211|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_000439|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AK303888|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177875|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001190442|CAST|831|calpastatin##AB208816|CAST|831|calpastatin##BC016066|CAST|831|calpastatin##NM_001042440|CAST|831|calpastatin##BC013579|CAST|831|calpastatin	0.246828	CTCF.p2:0:0.247
chr7	43148138	43148243	reg1011180.p2	9.199	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-176221	+	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	-176389	-	BC002900 AB528708 CR450317 CU690460 D00760 BC047697 TSC_hg19_v1_chr7_-_42971774 AK311369 BX641097 AK222976	-176437	-	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	4036	+	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	474504	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	620904	-	AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC002900|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##CR450317|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##D00760|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC047697|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BX641097|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK222976|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44	0.0	
chrX	23712778	23712868	reg1011855.p1	9.199	+	TSC_hg19_v1_chrX_+_23685665 BC003609 AB590368 DQ893599 DQ895027 CR541668 CR541705	-27151	+	TSC_hg19_v1_chrX_+_23685640 BC007107 NM_006406 U25182	-27177	+	TSC_hg19_v1_chrX_+_23685615 BC016770	-27200	+	AB528567 TSC_hg19_v1_chrX_-_23761366 BC136671 BC144360 BC144370 BC012573	48495	-	BX648512 AK000659 TSC_hg19_v1_chrX_-_23761394	48568	-	TSC_hg19_v1_chrX_-_23761415 NM_001033583 NM_001037171	48587	-	BC003609|PRDX4|10549|peroxiredoxin 4##DQ893599|PRDX4|10549|peroxiredoxin 4##DQ895027|PRDX4|10549|peroxiredoxin 4##CR541668|PRDX4|10549|peroxiredoxin 4##CR541705|PRDX4|10549|peroxiredoxin 4##BC007107|PRDX4|10549|peroxiredoxin 4##NM_006406|PRDX4|10549|peroxiredoxin 4##U25182|PRDX4|10549|peroxiredoxin 4##BC016770|PRDX4|10549|peroxiredoxin 4##BC136671|ACOT9|23597|acyl-CoA thioesterase 9##BC144360|ACOT9|23597|acyl-CoA thioesterase 9##BC144370|ACOT9|23597|acyl-CoA thioesterase 9##BC012573|ACOT9|23597|acyl-CoA thioesterase 9##BX648512|ACOT9|23597|acyl-CoA thioesterase 9##AK000659|ACOT9|23597|acyl-CoA thioesterase 9##NM_001033583|ACOT9|23597|acyl-CoA thioesterase 9##NM_001037171|ACOT9|23597|acyl-CoA thioesterase 9	0.997687	CTCF.p2:24:0.998
chr18	4106543	4106700	reg1016286.p1	9.198	+	AK294777 AK294717 NM_001242762 NM_001242763	-231894	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	-232337	-	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	-261291	-	AK304101 TSC_hg19_v1_chr18_-_4455255	348632	-	AK316099 NM_001242761 NM_004746 TSC_hg19_v1_chr18_-_4455271	348649	-	TSC_hg19_v1_chr18_-_5197257 NM_001145194	1090631	-	AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK304101|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK316099|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242761|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_004746|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42	0.988849	CTCF.p2:-9:0.989
chr15	64973751	64973876	reg1015096.p1	9.197	+	AB056456 TSC_hg19_v1_chr15_+_64885153	-88660	+	NM_015042	-182195	+	TSC_hg19_v1_chr15_+_64752786 BC142647	-220954	+	BC119629 BC119630 BC148316 BC127630 TSC_hg19_v1_chr15_-_64995360 BC127631 AF242520 AF242521	21547	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	21589	-	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	21656	-	NM_015042|ZNF609|23060|zinc finger protein 609##BC142647|ZNF609|23060|zinc finger protein 609##BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2##BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2	0.990507	CTCF.p2:18:0.991
chr2	88360020	88360129	reg1012894.p1	9.197	+	BC107580 TSC_hg19_v1_chr2_-_88355283	-4788	-	AF208845 AF217520 NM_016618 TSC_hg19_v1_chr2_-_88355252 BC015927	-4815	-	CR749330 NM_001024457	-74766	-	BC126191 NM_198274 AK091724 AX747145 BC017915 BX647878 AL832035 AB527846 EU831908 EU832002 HQ258264 AY518933	7275	+	CR542090 AB527938 M10617 BC032801 M10050 TSC_hg19_v1_chr2_-_88427582 BC022287 NM_001443	67518	-	NM_001244676 NM_001244678 AK289486 AK315831 BC064423	109790	+	BC107580|KRCC1|51315|lysine-rich coiled-coil 1##AF208845|KRCC1|51315|lysine-rich coiled-coil 1##AF217520|KRCC1|51315|lysine-rich coiled-coil 1##NM_016618|KRCC1|51315|lysine-rich coiled-coil 1##BC015927|KRCC1|51315|lysine-rich coiled-coil 1##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##BC126191|SMYD1|150572|SET and MYND domain containing 1##NM_198274|SMYD1|150572|SET and MYND domain containing 1##AK091724|SMYD1|150572|SET and MYND domain containing 1##BC017915|SMYD1|150572|SET and MYND domain containing 1##BX647878|SMYD1|150572|SET and MYND domain containing 1##AL832035|SMYD1|150572|SET and MYND domain containing 1##EU831908|SMYD1|150572|SET and MYND domain containing 1##EU832002|SMYD1|150572|SET and MYND domain containing 1##HQ258264|SMYD1|150572|SET and MYND domain containing 1##AY518933|SMYD1|150572|SET and MYND domain containing 1##CR542090|FABP1|2168|fatty acid binding protein 1, liver##M10617|FABP1|2168|fatty acid binding protein 1, liver##BC032801|FABP1|2168|fatty acid binding protein 1, liver##M10050|FABP1|2168|fatty acid binding protein 1, liver##BC022287|FABP1|2168|fatty acid binding protein 1, liver##NM_001443|FABP1|2168|fatty acid binding protein 1, liver##NM_001244676|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001244678|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK289486|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK315831|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC064423|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)	0.946065	CTCF.p2:2:0.946
chrX	47885162	47885282	reg1004430.p1	9.197	+	NM_001079900 AF217622	-18050	+	AY358844 NM_205856	-21489	+	TSC_hg19_v1_chrX_-_47863389 BC114216 AK299325 AK122874 NM_001007088 NM_006962 NM_001178099	-21869	-	AK307979 AK308650 NM_001037735	45272	-	NM_001190255	45778	-	AK302765 NM_001205103	82154	+	NM_001079900|SPACA5B|729201|sperm acrosome associated 5B##AF217622|SPACA5|389852|sperm acrosome associated 5##AY358844|SPACA5|389852|sperm acrosome associated 5##NM_205856|SPACA5|389852|sperm acrosome associated 5##BC114216|ZNF182|7569|zinc finger protein 182##AK299325|ZNF182|7569|zinc finger protein 182##AK122874|ZNF182|7569|zinc finger protein 182##NM_001007088|ZNF182|7569|zinc finger protein 182##NM_006962|ZNF182|7569|zinc finger protein 182##NM_001178099|ZNF182|7569|zinc finger protein 182##AK307979|ZNF630|57232|zinc finger protein 630##NM_001037735|ZNF630|57232|zinc finger protein 630##NM_001190255|ZNF630|57232|zinc finger protein 630##AK302765|LOC100509575|100509575|putative protein SSX6-like##NM_001205103|LOC100509575|100509575|putative protein SSX6-like	0.94752	CTCF.p2:-3:0.948
chr3	42872882	42872989	reg1013838.p2	9.196	+	BC011588 BC018716 BC020558 NM_001296 AK313561 BC008816 BC011631	-21966	+	TSC_hg19_v1_chr3_+_42846151 BC033952	-26775	+	TSC_hg19_v1_chr3_-_42845983 AK225461 BC009583 BC009594 BC000601 AF145385 AF077034 BC070277 AK225571 AK311815 AL110233 NM_001099669 NM_014056	-26949	-	AF090318 TSC_hg19_v1_chr3_-_42917348 BC067434 BC067441 BC067442 BC067443 BC067444 AK315330 AK310784	44395	-	NM_004391	44697	-	AK127779 NM_207404	74466	+	BC011588|CCBP2|1238|chemokine binding protein 2##BC018716|CCBP2|1238|chemokine binding protein 2##BC020558|CCBP2|1238|chemokine binding protein 2##NM_001296|CCBP2|1238|chemokine binding protein 2##AK313561|CCBP2|1238|chemokine binding protein 2##BC008816|CCBP2|1238|chemokine binding protein 2##BC011631|CCBP2|1238|chemokine binding protein 2##AK225461|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC009583|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC009594|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC000601|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AF145385|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AF077034|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC070277|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AK225571|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AK311815|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AL110233|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##NM_001099669|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##NM_014056|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AF090318|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067434|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067441|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067442|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067443|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067444|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##AK310784|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##NM_004391|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##AK127779|ZNF662|389114|zinc finger protein 662##NM_207404|ZNF662|389114|zinc finger protein 662	0.992415	CTCF.p2:-4:0.992
chr7	134409506	134409607	reg1012387.p1	9.195	+	NM_001724 NM_199186 TSC_hg19_v1_chr7_+_134331586 BC017050 AK315439 AK097778 X04327	-77971	+	NM_001080538	-175708	+	AF524864 NM_020299 BC008837	-197186	+	TSC_hg19_v1_chr7_+_134464170 NM_004342 NM_033138 NM_033157 AK289686	54610	+	TSC_hg19_v1_chr7_+_134464387 AK298524 AK304729 AF247820 M83216	54833	+	TSC_hg19_v1_chr7_+_134464419 BC040354	54866	+	NM_001724|BPGM|669|2,3-bisphosphoglycerate mutase##NM_199186|BPGM|669|2,3-bisphosphoglycerate mutase##BC017050|BPGM|669|2,3-bisphosphoglycerate mutase##AK315439|BPGM|669|2,3-bisphosphoglycerate mutase##AK097778|BPGM|669|2,3-bisphosphoglycerate mutase##X04327|BPGM|669|2,3-bisphosphoglycerate mutase##NM_001080538|AKR1B15|441282|aldo-keto reductase family 1, member B15##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_004342|CALD1|800|caldesmon 1##NM_033138|CALD1|800|caldesmon 1##NM_033157|CALD1|800|caldesmon 1##AK289686|CALD1|800|caldesmon 1##AK298524|CALD1|800|caldesmon 1##AK304729|CALD1|800|caldesmon 1##AF247820|CALD1|800|caldesmon 1##M83216|CALD1|800|caldesmon 1##BC040354|CALD1|800|caldesmon 1	0.564622	CTCF.p2:-3:0.565
chr1	97603965	97604099	reg1014046.p1	9.194	+	BC030757 TSC_hg19_v1_chr1_+_97260652	-343449	+	NM_021190 TSC_hg19_v1_chr1_+_97187343 AK092216 AB051232 AK299755 AK299922 AB209266 AF530580 AF530581 AF176085 AK299897 BC016582 AB051233	-416748	+	AB055763 TSC_hg19_v1_chr1_-_97145197	-458836	-	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	782457	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	782527	-	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	782574	-	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2##AK092216|PTBP2|58155|polypyrimidine tract binding protein 2##AB051232|PTBP2|58155|polypyrimidine tract binding protein 2##AK299755|PTBP2|58155|polypyrimidine tract binding protein 2##AK299922|PTBP2|58155|polypyrimidine tract binding protein 2##AB209266|PTBP2|58155|polypyrimidine tract binding protein 2##AF530580|PTBP2|58155|polypyrimidine tract binding protein 2##AF530581|PTBP2|58155|polypyrimidine tract binding protein 2##AF176085|PTBP2|58155|polypyrimidine tract binding protein 2##AK299897|PTBP2|58155|polypyrimidine tract binding protein 2##BC016582|PTBP2|58155|polypyrimidine tract binding protein 2##AB051233|PTBP2|58155|polypyrimidine tract binding protein 2##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase	0.03998	
chr1	224828884	224828984	reg1011580.p2	9.193	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-24755	+	AB209887 NM_001115113 NM_025160	-206934	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-207174	-	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	288431	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	786795	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	786867	-	AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor	0.233885	CTCF.p2:9:0.234
chr1	147113907	147114029	reg1014972.p1	9.192	+	NM_004326 Y13620 AK298105 TSC_hg19_v1_chr1_+_147013319	-100717	+	TSC_hg19_v1_chr1_+_146714335 AK298424 AK297135 BC077717 AK293157 BC001171 AF054177 BC043501 BC053354 BC005038	-399604	+	NM_004284 TSC_hg19_v1_chr1_+_146714333 EF560738 AF537213 AK001342 AK027631 AK307400	-399657	+	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	28526	-	BC013313 NM_181703	118730	-	NM_005266	131515	-	NM_004326|BCL9|607|B-cell CLL/lymphoma 9##Y13620|BCL9|607|B-cell CLL/lymphoma 9##AK298424|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK297135|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC077717|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK293157|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC001171|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF054177|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC043501|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC053354|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC005038|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##NM_004284|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##EF560738|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF537213|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK001342|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK027631|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK307400|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_005266|GJA5|2702|gap junction protein, alpha 5, 40kDa	0.997251	CTCF.p2:7:0.997
chr1	172688897	172689010	reg1013395.p2	9.192	+	D38122 AK314874 NM_000639 X89102 BC017502 U08137 AF288573 U11821 AB528416 DQ893466 DQ896147 CU675998 AY225406 AY858799	-60704	+	TSC_hg19_v1_chr1_+_172502291 NM_016227 AK302509 AL035291 BC137125 BC144487	-186572	+	TSC_hg19_v1_chr1_+_172502152 AK302949 AJ250075 NM_014283	-186811	+	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	331103	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	485700	-	CR542033 D90224 X79929 NM_003326	487439	-	D38122|FASLG|356|Fas ligand (TNF superfamily, member 6)##AK314874|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_000639|FASLG|356|Fas ligand (TNF superfamily, member 6)##X89102|FASLG|356|Fas ligand (TNF superfamily, member 6)##BC017502|FASLG|356|Fas ligand (TNF superfamily, member 6)##U08137|FASLG|356|Fas ligand (TNF superfamily, member 6)##AF288573|FASLG|356|Fas ligand (TNF superfamily, member 6)##U11821|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ893466|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ896147|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY225406|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY858799|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_016227|C1orf9|51430|chromosome 1 open reading frame 9##AK302509|C1orf9|51430|chromosome 1 open reading frame 9##AL035291|C1orf9|51430|chromosome 1 open reading frame 9##BC137125|C1orf9|51430|chromosome 1 open reading frame 9##BC144487|C1orf9|51430|chromosome 1 open reading frame 9##AK302949|C1orf9|51430|chromosome 1 open reading frame 9##AJ250075|C1orf9|51430|chromosome 1 open reading frame 9##NM_014283|C1orf9|51430|chromosome 1 open reading frame 9##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	0.409643	CTCF.p2:4:0.410
chr19	56821056	56821186	reg1012729.p1	9.192	+	BC002636 NM_024303 AK098700	-81453	-	NM_001080456	-116701	-	AF188492 AF188493 NM_001145546 NM_033106	-133733	+	BX647919 AK097128 TSC_hg19_v1_chr19_+_56879704 AL833621 BC064603 BC089419	58595	+	TSC_hg19_v1_chr19_-_56904904 AK055489 NM_144690 AK299036 BC056238 AK316028	83771	-	NM_001159860	94261	+	BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_001080456|ZSCAN5B|342933|zinc finger and SCAN domain containing 5B##AF188492|GALP|85569|galanin-like peptide##AF188493|GALP|85569|galanin-like peptide##NM_001145546|GALP|85569|galanin-like peptide##NM_033106|GALP|85569|galanin-like peptide##BX647919|ZNF542|147947|zinc finger protein 542##AK097128|ZNF542|147947|zinc finger protein 542##AL833621|ZNF542|147947|zinc finger protein 542##BC064603|ZNF542|147947|zinc finger protein 542##BC089419|ZNF542|147947|zinc finger protein 542##AK055489|ZNF582|147948|zinc finger protein 582##NM_144690|ZNF582|147948|zinc finger protein 582##AK299036|ZNF582|147948|zinc finger protein 582##BC056238|ZNF582|147948|zinc finger protein 582##AK316028|ZNF582|147948|zinc finger protein 582##NM_001159860|ZNF583|147949|zinc finger protein 583	1.148038	CTCF.p2:-11:0.970
chr1	85720545	85720678	reg1016442.p1	9.191	+	NM_032184 TSC_hg19_v1_chr1_-_85666752	-53871	-	NM_145172 AY049724 AK292603 AK054629 BC040265	-192602	+	TSC_hg19_v1_chr1_-_85514184 BX647497 AK314354 NM_001253693 NM_018298	-206413	-	AF387611 AF387612 AY486331 AY486332 BC029538 TSC_hg19_v1_chr1_-_85725338 AK126929 NM_198077	4728	-	AK098790 AF105066 AF127386 CU691004 AB527491 EF189176 BC053617 TSC_hg19_v1_chr1_-_85742229 BX647306 AK291346 AF100338 AF057700 AF134395	21524	-	NM_003921	21975	-	NM_032184|SYDE2|84144|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)##NM_145172|WDR63|126820|WD repeat domain 63##AY049724|WDR63|126820|WD repeat domain 63##AK292603|WDR63|126820|WD repeat domain 63##AK054629|WDR63|126820|WD repeat domain 63##BC040265|WDR63|126820|WD repeat domain 63##BX647497|MCOLN3|55283|mucolipin 3##AK314354|MCOLN3|55283|mucolipin 3##NM_001253693|MCOLN3|55283|mucolipin 3##NM_018298|MCOLN3|55283|mucolipin 3##AF387611|C1orf52|148423|chromosome 1 open reading frame 52##AF387612|C1orf52|148423|chromosome 1 open reading frame 52##AY486331|C1orf52|148423|chromosome 1 open reading frame 52##AY486332|C1orf52|148423|chromosome 1 open reading frame 52##BC029538|C1orf52|148423|chromosome 1 open reading frame 52##AK126929|C1orf52|148423|chromosome 1 open reading frame 52##NM_198077|C1orf52|148423|chromosome 1 open reading frame 52##AF105066|BCL10|8915|B-cell CLL/lymphoma 10##AF127386|BCL10|8915|B-cell CLL/lymphoma 10##EF189176|BCL10|8915|B-cell CLL/lymphoma 10##BC053617|BCL10|8915|B-cell CLL/lymphoma 10##BX647306|BCL10|8915|B-cell CLL/lymphoma 10##AK291346|BCL10|8915|B-cell CLL/lymphoma 10##AF100338|BCL10|8915|B-cell CLL/lymphoma 10##AF057700|BCL10|8915|B-cell CLL/lymphoma 10##AF134395|BCL10|8915|B-cell CLL/lymphoma 10##NM_003921|BCL10|8915|B-cell CLL/lymphoma 10	0.253448	CTCF.p2:17:0.253
chr20	17661917	17662017	reg1014393.p1	9.190	+	TSC_hg19_v1_chr20_-_17641123 AB287347 AB384598	-20831	-	NM_001011546 NM_006870 TSC_hg19_v1_chr20_+_17550756 AK315994 BC009477 AK312645 BX647319 S65738 AK302338	-111228	+	AK316247 BC041483 NM_001161705	-122425	-	BC128578 BC128577 TSC_hg19_v1_chr20_-_17662793 AF006751	798	-	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	916	-	NM_001159495	12352	+	AB287347|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001011546|DSTN|11034|destrin (actin depolymerizing factor)##NM_006870|DSTN|11034|destrin (actin depolymerizing factor)##AK315994|DSTN|11034|destrin (actin depolymerizing factor)##BC009477|DSTN|11034|destrin (actin depolymerizing factor)##AK312645|DSTN|11034|destrin (actin depolymerizing factor)##BX647319|DSTN|11034|destrin (actin depolymerizing factor)##S65738|DSTN|11034|destrin (actin depolymerizing factor)##AK302338|DSTN|11034|destrin (actin depolymerizing factor)##AK316247|BFSP1|631|beaded filament structural protein 1, filensin##BC041483|BFSP1|631|beaded filament structural protein 1, filensin##NM_001161705|BFSP1|631|beaded filament structural protein 1, filensin##BC128578|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128577|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AF006751|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001159495|BANF2|140836|barrier to autointegration factor 2	0.759278	CTCF.p2:-15:0.759
chr2	88491104	88491212	reg1014337.p1	9.190	+	NM_018271 BC050699 BC035315 AK001778	-18402	+	NM_001244676 NM_001244678 AK289486 AK315831 BC064423	-21294	+	CR542090 AB527938 M10617 BC032801 M10050 TSC_hg19_v1_chr2_-_88427582 BC022287 NM_001443	-63566	-	NM_001135649	260894	-	AK058098 NM_152670 BC029522	333026	+	AF110146 BC126354 BC126356 AK128659 TSC_hg19_v1_chr2_-_88926983 AK315287 AF193339 NM_004836	435820	-	NM_018271|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC050699|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC035315|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK001778|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001244676|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001244678|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK289486|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK315831|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC064423|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##CR542090|FABP1|2168|fatty acid binding protein 1, liver##M10617|FABP1|2168|fatty acid binding protein 1, liver##BC032801|FABP1|2168|fatty acid binding protein 1, liver##M10050|FABP1|2168|fatty acid binding protein 1, liver##BC022287|FABP1|2168|fatty acid binding protein 1, liver##NM_001443|FABP1|2168|fatty acid binding protein 1, liver##NM_001135649|FOXI3|344167|forkhead box I3##AK058098|C2orf51|200523|chromosome 2 open reading frame 51##NM_152670|C2orf51|200523|chromosome 2 open reading frame 51##BC029522|C2orf51|200523|chromosome 2 open reading frame 51##AF110146|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126354|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126356|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK128659|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK315287|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AF193339|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##NM_004836|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3	0.999764	CTCF.p2:9:1.000
chrX	111390595	111390709	reg1013475.p2	9.190	+	AK128465 NM_001004308	-64400	+	AF054568 NM_012471	-64649	-	BC034811 NM_001195577	-265528	+	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	532687	-	AB384557 AY987378 NM_001113490	675701	-	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	693410	-	AK128465|ZCCHC16|340595|zinc finger, CCHC domain containing 16##NM_001004308|ZCCHC16|340595|zinc finger, CCHC domain containing 16##AF054568|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##NM_012471|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##BC034811|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195577|LOC100329135|100329135|uncharacterized LOC100329135##BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin	0.534075	CTCF.p2:-18:0.534
chr17	37392050	37392197	reg1017453.p1	9.189	+	BC109231 AJ608762 AK131500 NM_198993	-10144	-	TSC_hg19_v1_chr17_+_37356579 BC000530 S56985 BC013016	-35542	+	TSC_hg19_v1_chr17_+_37356573 AK223082 BC062709 BX537435	-35551	+	TSC_hg19_v1_chr17_-_37557855 BC007557 DQ223959 AK312612 AK291844 AK123048 NM_001184906 NM_032875	165777	-	CU687400 BC131783 AF055994 BC006517 Y13467 BC060758 TSC_hg19_v1_chr17_-_37607519 AK299789 AK314185 NM_004774	215298	-	TSC_hg19_v1_chr17_+_37617760 NM_015083 NM_016507 AK302645	225629	+	BC109231|STAC2|342667|SH3 and cysteine rich domain 2##AJ608762|STAC2|342667|SH3 and cysteine rich domain 2##AK131500|STAC2|342667|SH3 and cysteine rich domain 2##NM_198993|STAC2|342667|SH3 and cysteine rich domain 2##BC000530|RPL19|6143|ribosomal protein L19##S56985|RPL19|6143|ribosomal protein L19##BC013016|RPL19|6143|ribosomal protein L19##AK223082|RPL19|6143|ribosomal protein L19##BC062709|RPL19|6143|ribosomal protein L19##BX537435|RPL19|6143|ribosomal protein L19##BC007557|FBXL20|84961|F-box and leucine-rich repeat protein 20##DQ223959|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK312612|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK291844|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK123048|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_001184906|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_032875|FBXL20|84961|F-box and leucine-rich repeat protein 20##BC131783|MED1|5469|mediator complex subunit 1##AF055994|MED1|5469|mediator complex subunit 1##BC006517|MED1|5469|mediator complex subunit 1##Y13467|MED1|5469|mediator complex subunit 1##BC060758|MED1|5469|mediator complex subunit 1##AK299789|MED1|5469|mediator complex subunit 1##AK314185|MED1|5469|mediator complex subunit 1##NM_004774|MED1|5469|mediator complex subunit 1##NM_015083|CDK12|51755|cyclin-dependent kinase 12##NM_016507|CDK12|51755|cyclin-dependent kinase 12##AK302645|CDK12|51755|cyclin-dependent kinase 12	0.933629	CTCF.p2:33:0.934
chr5	118323860	118323987	reg1009526.p1	9.189	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-2413409	-	TSC_hg19_v1_chr5_+_115898220 D28352	-2425699	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-2903202	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	315	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	82888	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	83242	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.969472	CTCF.p2:-1:0.969
chr6	80924277	80924417	reg1014546.p1	9.189	+	TSC_hg19_v1_chr6_+_80816397 AK289977 BC040139 M55575 AB529112 BT020063 X52446	-107910	+	TSC_hg19_v1_chr6_+_80816387 AK316545 BC034481	-107964	+	TSC_hg19_v1_chr6_+_80816367 NM_000056 NM_183050 AK304353 U50708	-108020	+	AY740520 FJ211061 CU674334 CU675631 TSC_hg19_v1_chr6_-_82461975	1537574	-	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	1538064	-	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	2033066	-	AK289977|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC040139|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##M55575|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BT020063|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##X52446|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK316545|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC034481|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##NM_000056|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##NM_183050|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK304353|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##U50708|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AY740520|FAM46A|55603|family with sequence similarity 46, member A##AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase	0.11588	
chr10	105236221	105236345	reg1013948.p2	9.188	+	BC036193 BC036208 NM_001001412	-17638	-	TSC_hg19_v1_chr10_-_105212166 AK022195 NM_015916	-24120	-	AF131810 TSC_hg19_v1_chr10_-_105212068 BC000039	-24219	-	BC043367 NM_001129742	2713	-	NM_004210 U87864	17451	+	AK299620 TSC_hg19_v1_chr10_+_105344798	108484	+	BC036193|CALHM1|255022|calcium homeostasis modulator 1##BC036208|CALHM1|255022|calcium homeostasis modulator 1##NM_001001412|CALHM1|255022|calcium homeostasis modulator 1##AK022195|CALHM2|51063|calcium homeostasis modulator 2##NM_015916|CALHM2|51063|calcium homeostasis modulator 2##AF131810|CALHM2|51063|calcium homeostasis modulator 2##BC000039|CALHM2|51063|calcium homeostasis modulator 2##BC043367|CALHM3|119395|calcium homeostasis modulator 3##NM_001129742|CALHM3|119395|calcium homeostasis modulator 3##NM_004210|NEURL|9148|neuralized homolog (Drosophila)##U87864|NEURL|9148|neuralized homolog (Drosophila)##AK299620|NEURL|9148|neuralized homolog (Drosophila)	0.44207	CTCF.p2:0:0.442
chr2	96782865	96782994	reg1014852.p1	9.188	+	NM_000682 AB527942 BC133021 BC136537	-994	-	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	-82235	-	TSC_hg19_v1_chr2_+_96676311 BC015216	-106605	+	BC107126 AJ537600 BC107127 NM_001002036	21244	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	28025	-	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	28230	-	NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2	0.734978	CTCF.p2:-16:0.735
chr8	95959414	95959563	reg1013592.p1	9.188	+	TSC_hg19_v1_chr8_-_95907430 BC007015 BC020729 NM_057749	-52036	-	TSC_hg19_v1_chr8_+_95835588 BC136754 BC144396 BC144397	-123788	+	TSC_hg19_v1_chr8_+_95835522 BC099915 AB161944 NM_017864	-123940	+	TSC_hg19_v1_chr8_-_95961604 AK315071 AF409114 AF409115 AK125880 NM_001135733 NM_033285	2169	-	TSC_hg19_v1_chr8_+_96037224 NM_152416 BC028166 DQ891641 DQ894830 AK298631 AK301414	77816	+	TSC_hg19_v1_chr8_+_96145948 NM_024613	186457	+	BC007015|CCNE2|9134|cyclin E2##BC020729|CCNE2|9134|cyclin E2##NM_057749|CCNE2|9134|cyclin E2##BC136754|INTS8|55656|integrator complex subunit 8##BC144396|INTS8|55656|integrator complex subunit 8##BC144397|INTS8|55656|integrator complex subunit 8##BC099915|INTS8|55656|integrator complex subunit 8##AB161944|INTS8|55656|integrator complex subunit 8##NM_017864|INTS8|55656|integrator complex subunit 8##AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_152416|C8orf38|137682|chromosome 8 open reading frame 38##BC028166|C8orf38|137682|chromosome 8 open reading frame 38##DQ891641|C8orf38|137682|chromosome 8 open reading frame 38##DQ894830|C8orf38|137682|chromosome 8 open reading frame 38##AK298631|C8orf38|137682|chromosome 8 open reading frame 38##AK301414|C8orf38|137682|chromosome 8 open reading frame 38##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2	0.183178	
chr22	37663216	37663344	reg1012539.p1	9.187	+	TSC_hg19_v1_chr22_-_37640315 AK096924 BC001485 NM_002872	-22979	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	-23059	-	BC042068 NM_001051 AK291165	-54897	-	AF125349 AF075458 NM_013385 TSC_hg19_v1_chr22_+_37678513	15188	+	TSC_hg19_v1_chr22_+_37678548 AK304453 BC017780	15257	+	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	15296	+	AK096924|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BC001485|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##NM_002872|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF125349|CYTH4|27128|cytohesin 4##AF075458|CYTH4|27128|cytohesin 4##NM_013385|CYTH4|27128|cytohesin 4##AK304453|CYTH4|27128|cytohesin 4##BC017780|CYTH4|27128|cytohesin 4##BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4	0.0	
chr9	88434016	88434181	reg1011754.p1	9.187	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	-77227	-	U12140 TSC_hg19_v1_chr9_+_87285349	-1148766	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-1149346	+	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	121976	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	122080	+	TSC_hg19_v1_chr9_-_88714445 AY358593 BC001740 AK075542 AF236056	280327	-	AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AY358593|GOLM1|51280|golgi membrane protein 1##BC001740|GOLM1|51280|golgi membrane protein 1##AK075542|GOLM1|51280|golgi membrane protein 1##AF236056|GOLM1|51280|golgi membrane protein 1	0.950318	CTCF.p2:-15:0.950
chr11	128627268	128627403	reg1014696.p1	9.186	+	TSC_hg19_v1_chr11_+_128564132 AB385119 AY029368 CU674822 DQ892582 DQ896858	-63193	+	TSC_hg19_v1_chr11_+_128563997 X67001 S45205 BC010115 BC001670	-63280	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	-63355	+	BC136360 BC136361 BC074752 NM_000220 U12541 AK314267 AK290797	85043	-	U12544 U12545 AK308032 U12543 U03884 AK308033 BC063109 NM_153764 NM_153765 NM_153766 NM_153767 U12542	109864	-	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	134005	+	AY029368|FLI1|2313|Friend leukemia virus integration 1##DQ892582|FLI1|2313|Friend leukemia virus integration 1##DQ896858|FLI1|2313|Friend leukemia virus integration 1##X67001|FLI1|2313|Friend leukemia virus integration 1##S45205|FLI1|2313|Friend leukemia virus integration 1##BC010115|FLI1|2313|Friend leukemia virus integration 1##BC001670|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1##BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5	0.019452	
chr22	17255615	17255710	reg1012774.p1	9.186	+	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	-182093	-	NM_001005239	-805859	-	BC127623 AY465171 AY465172 AY466021 NM_001136213	-967736	-	BC137521 BC137522 BC144679 AY989815 AK098608 AY534240 BC045548 NM_175878	46907	-	AB076978 NM_001037814	233449	-	TSC_hg19_v1_chr22_+_17565850 NM_014339	310189	+	BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_001005239|OR11H1|81061|olfactory receptor, family 11, subfamily H, member 1##BC127623|POTEG|404785|POTE ankyrin domain family, member G##AY465171|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##AY466021|POTEH|23784|POTE ankyrin domain family, member H##NM_001136213|POTEH|23784|POTE ankyrin domain family, member H##BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AB076978|GAB4|128954|GRB2-associated binding protein family, member 4##NM_001037814|GAB4|128954|GRB2-associated binding protein family, member 4##NM_014339|IL17RA|23765|interleukin 17 receptor A	0.389511	CTCF.p2:-4:0.390
chr6	12606110	12606285	reg1013535.p1	9.186	+	TSC_hg19_v1_chr6_+_12514301 D28417	-91895	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	-315604	+	NM_002114	-593474	+	AK295263 TSC_hg19_v1_chr6_+_12716998	110746	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	110846	+	AK091836 AX747210 NM_001242698	689620	-	NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357	0.992526	CTCF.p2:12:0.993
chrX	13110902	13111082	reg1013379.p2	9.186	+	BX647580 AK313776 AF494345 BX648111 BX648919 NM_174901	-48174	-	TSC_hg19_v1_chrX_+_12994293 BC104464 BC104465 BT007090 X02493	-116649	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	-117752	+	AB050195 TSC_hg19_v1_chrX_-_13338140 BC137186 BC137187	227146	-	AK302365 NM_001135995	227525	-	TSC_hg19_v1_chrX_-_13397507 D28370	286513	-	BX647580|FAM9C|171484|family with sequence similarity 9, member C##AK313776|FAM9C|171484|family with sequence similarity 9, member C##AF494345|FAM9C|171484|family with sequence similarity 9, member C##BX648111|FAM9C|171484|family with sequence similarity 9, member C##BX648919|FAM9C|171484|family with sequence similarity 9, member C##NM_174901|FAM9C|171484|family with sequence similarity 9, member C##BC104464|TMSB4X|7114|thymosin beta 4, X-linked##BC104465|TMSB4X|7114|thymosin beta 4, X-linked##BT007090|TMSB4X|7114|thymosin beta 4, X-linked##X02493|TMSB4X|7114|thymosin beta 4, X-linked##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked##AB050195|ATXN3L|92552|ataxin 3-like##BC137186|ATXN3L|92552|ataxin 3-like##BC137187|ATXN3L|92552|ataxin 3-like##AK302365|ATXN3L|92552|ataxin 3-like##NM_001135995|ATXN3L|92552|ataxin 3-like	0.0	
chr10	111898094	111898220	reg1011847.p1	9.185	+	AK291488 TSC_hg19_v1_chr10_+_111767988 U37122 BC043143	-130190	+	TSC_hg19_v1_chr10_+_111767741 BX647403 NM_001121 NM_016824 BC062559 BX648016	-130428	+	NM_019903 AB209810 BC057285	-132376	+	TSC_hg19_v1_chr10_+_111967381 BC035128 NM_130439	69202	+	BC012907 NM_001008541	71831	+	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	87664	+	AK291488|ADD3|120|adducin 3 (gamma)##U37122|ADD3|120|adducin 3 (gamma)##BC043143|ADD3|120|adducin 3 (gamma)##BX647403|ADD3|120|adducin 3 (gamma)##NM_001121|ADD3|120|adducin 3 (gamma)##NM_016824|ADD3|120|adducin 3 (gamma)##BC062559|ADD3|120|adducin 3 (gamma)##BX648016|ADD3|120|adducin 3 (gamma)##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)##BC035128|MXI1|4601|MAX interactor 1##NM_130439|MXI1|4601|MAX interactor 1##BC012907|MXI1|4601|MAX interactor 1##NM_001008541|MXI1|4601|MAX interactor 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1	0.8458	CTCF.p2:2:0.846
chr12	69684904	69685034	reg1014263.p1	9.185	+	TSC_hg19_v1_chr12_+_69633357 BC005000 BC000714 X67337 AK292024 CU674352 CU678850 DQ892159 EU176688	-51580	+	NM_007007 TSC_hg19_v1_chr12_+_69633348 AK223568 AK299928	-51636	+	J04970 NM_001874 AK127859	-327950	-	TSC_hg19_v1_chr12_+_69742133 AK130149 NM_000239	57162	+	TSC_hg19_v1_chr12_+_69742163 AK310930 AK311779 J03801 FJ795023 BC004147 M21119 M19045 AB463851 DQ892271 DQ895472 U25677	57240	+	TSC_hg19_v1_chr12_+_69753535 NM_006530 U61384 AJ245746 BC000994 AK001413 AB464359 EU446926	68637	+	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##J04970|CPM|1368|carboxypeptidase M##NM_001874|CPM|1368|carboxypeptidase M##AK127859|CPM|1368|carboxypeptidase M##AK130149|LYZ|4069|lysozyme##NM_000239|LYZ|4069|lysozyme##AK311779|LYZ|4069|lysozyme##J03801|LYZ|4069|lysozyme##FJ795023|LYZ|4069|lysozyme##BC004147|LYZ|4069|lysozyme##M21119|LYZ|4069|lysozyme##M19045|LYZ|4069|lysozyme##DQ892271|LYZ|4069|lysozyme##DQ895472|LYZ|4069|lysozyme##U25677|LYZ|4069|lysozyme##NM_006530|YEATS4|8089|YEATS domain containing 4##U61384|YEATS4|8089|YEATS domain containing 4##AJ245746|YEATS4|8089|YEATS domain containing 4##BC000994|YEATS4|8089|YEATS domain containing 4##AK001413|YEATS4|8089|YEATS domain containing 4##EU446926|YEATS4|8089|YEATS domain containing 4	0.027756	
chr21	41087870	41087974	reg1014083.p2	9.185	+	AB020337 NM_006057 NM_033170 NM_033171 NM_033172 NM_033173	-58669	+	NM_007341 X93498 BC006371 BT006994 GQ129448 GQ129449	-264116	+	TSC_hg19_v1_chr21_+_40817797 NM_001001713	-270127	+	AK092516 AX747579 NM_001080444 AB528819	29462	+	NM_006198 U52969 AK289964 BC013791 X93349 AF416716 AM183336	151455	+	AB384859 AB209136 TSC_hg19_v1_chr21_-_42218650	1130696	-	AB020337|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_006057|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033170|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033171|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033172|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033173|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_007341|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##X93498|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##BC006371|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##BT006994|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##GQ129448|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##GQ129449|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##NM_001001713|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##AK092516|IGSF5|150084|immunoglobulin superfamily, member 5##NM_001080444|IGSF5|150084|immunoglobulin superfamily, member 5##NM_006198|PCP4|5121|Purkinje cell protein 4##U52969|PCP4|5121|Purkinje cell protein 4##AK289964|PCP4|5121|Purkinje cell protein 4##BC013791|PCP4|5121|Purkinje cell protein 4##X93349|PCP4|5121|Purkinje cell protein 4##AF416716|PCP4|5121|Purkinje cell protein 4##AM183336|PCP4|5121|Purkinje cell protein 4##AB209136|DSCAM|1826|Down syndrome cell adhesion molecule	0.996058	CTCF.p2:-4:0.996
chr14	64896837	64896978	reg1016579.p1	9.184	+	TSC_hg19_v1_chr14_+_64855070 AK095514 AK312361 BC050420 AK309266 BC009806 J04031 AB384767 DQ893634 DQ896853	-41811	+	AK302747 NM_005956	-42154	+	NM_001040276 BX247957 TSC_hg19_v1_chr14_-_64805347	-91549	-	AK315336 NM_004857 BC057229	35353	+	TSC_hg19_v1_chr14_-_64970524 NM_006977 BC035804	73536	-	TSC_hg19_v1_chr14_+_64971227 BX248777 NM_001123329 NM_014950	74351	+	AK312361|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC050420|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK309266|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC009806|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##J04031|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ893634|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ896853|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK302747|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_005956|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_001040276|ESR2|2100|estrogen receptor 2 (ER beta)##BX247957|ESR2|2100|estrogen receptor 2 (ER beta)##AK315336|AKAP5|9495|A kinase (PRKA) anchor protein 5##NM_004857|AKAP5|9495|A kinase (PRKA) anchor protein 5##BC057229|AKAP5|9495|A kinase (PRKA) anchor protein 5##NM_006977|ZBTB25|7597|zinc finger and BTB domain containing 25##BC035804|ZBTB25|7597|zinc finger and BTB domain containing 25##BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1	0.834089	CTCF.p2:-6:0.834
chr8	31322106	31322228	reg1015933.p1	9.184	+	TSC_hg19_v1_chr8_+_30891325 AF091214	-430876	+	AF195513 AY077841 NM_001015508	-430937	-	NM_000553	-431390	+	NM_013962	175100	+	AK298132 NM_001160002 NM_001160004 NM_001160005 NM_001160007 NM_001160008 NM_004495 NM_013956 NM_013957 NM_013958 NM_013960 NM_013964 M94168 BC006492 TSC_hg19_v1_chr8_+_32405834 M94167 AF026146 AK097005 AK290730 L12261	1083622	+	AK289927 NM_013959	1182083	+	AF091214|WRN|7486|Werner syndrome, RecQ helicase-like##AF195513|PURG|29942|purine-rich element binding protein G##AY077841|PURG|29942|purine-rich element binding protein G##NM_001015508|PURG|29942|purine-rich element binding protein G##NM_000553|WRN|7486|Werner syndrome, RecQ helicase-like##NM_013962|NRG1|3084|neuregulin 1##AK298132|NRG1|3084|neuregulin 1##NM_001160002|NRG1|3084|neuregulin 1##NM_001160004|NRG1|3084|neuregulin 1##NM_001160005|NRG1|3084|neuregulin 1##NM_001160007|NRG1|3084|neuregulin 1##NM_001160008|NRG1|3084|neuregulin 1##NM_004495|NRG1|3084|neuregulin 1##NM_013956|NRG1|3084|neuregulin 1##NM_013957|NRG1|3084|neuregulin 1##NM_013958|NRG1|3084|neuregulin 1##NM_013960|NRG1|3084|neuregulin 1##NM_013964|NRG1|3084|neuregulin 1##M94168|NRG1|3084|neuregulin 1##BC006492|NRG1|3084|neuregulin 1##M94167|NRG1|3084|neuregulin 1##AF026146|NRG1|3084|neuregulin 1##AK097005|NRG1|3084|neuregulin 1##AK290730|NRG1|3084|neuregulin 1##L12261|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1	0.462517	CTCF.p2:5:0.463
chr9	7844424	7844534	reg1013469.p1	9.183	+	AL137489 TSC_hg19_v1_chr9_-_7799779 BC009510 AK308643 AK128876 AK292632 NM_033428	-44764	-	TSC_hg19_v1_chr9_+_6757984 AB018323 AK304095 AK314355 AB037901 BC008296 AK303651 AK304032 BC104859 BC104861 BC143571	-1086440	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	-1086812	+	TSC_hg19_v1_chr9_+_8713275 AY779046	868813	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	889440	-	TSC_hg19_v1_chr9_+_8858136 AK094342	1013654	+	AL137489|C9orf123|90871|chromosome 9 open reading frame 123##BC009510|C9orf123|90871|chromosome 9 open reading frame 123##AK292632|C9orf123|90871|chromosome 9 open reading frame 123##NM_033428|C9orf123|90871|chromosome 9 open reading frame 123##AB018323|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304095|KDM4C|23081|lysine (K)-specific demethylase 4C##AK314355|KDM4C|23081|lysine (K)-specific demethylase 4C##AB037901|KDM4C|23081|lysine (K)-specific demethylase 4C##BC008296|KDM4C|23081|lysine (K)-specific demethylase 4C##AK303651|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304032|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104859|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104861|KDM4C|23081|lysine (K)-specific demethylase 4C##BC143571|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C##AY779046|RPL18A|6142|ribosomal protein L18a##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	0.197521	
chr1	234205650	234205777	reg1014095.p1	9.182	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-165101	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-455794	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	-455890	+	TSC_hg19_v1_chr1_+_234350005 BC037878	144293	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	303659	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	409147	-	AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##BC037878|SLC35F3|148641|solute carrier family 35, member F3##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1	0.075048	
chr12	34276135	34276245	reg1011858.p1	9.182	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-100717	+	TSC_hg19_v1_chr12_+_34175402 BC022336	-100804	+	AJ312278 NM_032834	-100975	+	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	4434435	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	5023193	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	5560809	-	BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC022336|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AJ312278|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_032834|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A	1.239218	CTCF.p2:-8:0.257	CTCF.p2:46:0.983
chr1	39301010	39301171	reg1013875.p2	9.182	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-788641	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-822660	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-822705	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	24296	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	37926	-	AK312811 BC051675 AK123051 NM_030772	46187	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.998544	CTCF.p2:9:0.999
chr1	26743653	26743773	reg1015489.p1	9.181	+	TSC_hg19_v1_chr1_+_26737312 AF521099 AK022519 DQ893398 DQ896719 AB528435 CU688506	-6370	+	TSC_hg19_v1_chr1_+_26737262 BC028566 NM_024674	-6462	+	BC028731 BC029505 NM_001114759 NM_173574	-44468	-	BX648507 NM_001243564 NM_001243565 NM_024887 NM_205861 TSC_hg19_v1_chr1_+_26758838 AK308187 AK316485 BC004117 AK023164 AK297134	15132	+	NM_005517 BC075837 TSC_hg19_v1_chr1_+_26798941	55209	+	TSC_hg19_v1_chr1_+_26799005 BC070297 BC110390 BC000378 BC003050 BC071707 BC032140 BC072010 BC081567 BC014644 BC072011 M12623 BC003689 AK026562 AB464439 CR542122	55319	+	AF521099|LIN28A|79727|lin-28 homolog A (C. elegans)##AK022519|LIN28A|79727|lin-28 homolog A (C. elegans)##DQ893398|LIN28A|79727|lin-28 homolog A (C. elegans)##DQ896719|LIN28A|79727|lin-28 homolog A (C. elegans)##BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)##NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)##BC028731|ZNF683|257101|zinc finger protein 683##BC029505|ZNF683|257101|zinc finger protein 683##NM_001114759|ZNF683|257101|zinc finger protein 683##NM_173574|ZNF683|257101|zinc finger protein 683##BX648507|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_001243564|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_001243565|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_024887|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_205861|DHDDS|79947|dehydrodolichyl diphosphate synthase##AK308187|DHDDS|79947|dehydrodolichyl diphosphate synthase##AK316485|DHDDS|79947|dehydrodolichyl diphosphate synthase##BC004117|DHDDS|79947|dehydrodolichyl diphosphate synthase##AK023164|DHDDS|79947|dehydrodolichyl diphosphate synthase##AK297134|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_005517|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC075837|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC070297|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC110390|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC000378|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC003050|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC071707|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC032140|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC072010|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC081567|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC014644|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC072011|HMGN2|3151|high mobility group nucleosomal binding domain 2##M12623|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC003689|HMGN2|3151|high mobility group nucleosomal binding domain 2##AK026562|HMGN2|3151|high mobility group nucleosomal binding domain 2##CR542122|HMGN2|3151|high mobility group nucleosomal binding domain 2	0.999368	CTCF.p2:-6:0.999
chr1	110554363	110554479	reg1013448.p2	9.180	+	NM_001242675 NM_001242676	-7852	+	NM_001242674	-10873	+	TSC_hg19_v1_chr1_+_110527760 CU675713 DQ891021 DQ894201	-26662	+	TSC_hg19_v1_chr1_+_110560111 BC003631	5706	+	TSC_hg19_v1_chr1_+_110577229 BC119814 BC121793 NM_033088	22808	+	BC094786 TSC_hg19_v1_chr1_+_110577243	22821	+	NM_001242675|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_001242676|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_001242674|AHCYL1|10768|adenosylhomocysteinase-like 1##DQ891021|AHCYL1|10768|adenosylhomocysteinase-like 1##DQ894201|AHCYL1|10768|adenosylhomocysteinase-like 1##BC003631|AHCYL1|10768|adenosylhomocysteinase-like 1##BC119814|FAM40A|85369|family with sequence similarity 40, member A##BC121793|FAM40A|85369|family with sequence similarity 40, member A##NM_033088|FAM40A|85369|family with sequence similarity 40, member A##BC094786|FAM40A|85369|family with sequence similarity 40, member A	0.944674	CTCF.p2:-4:0.945
chr11	58281337	58281474	reg1013120.p2	9.180	+	NM_001005218	-5828	-	BC136947 BC136948 NM_001004733	-73760	-	BC136923 BC136922 NM_001005566	-90622	-	BC007490 BC019035 TSC_hg19_v1_chr11_-_58343330 AK313306 AK223165 AK301093 AF062075 NM_004811	61943	-	BC034230 TSC_hg19_v1_chr11_-_58345666 AK300955 NM_001143995 AK299264	64256	-	TSC_hg19_v1_chr11_+_58346591 BC051743 NM_001197051 NM_053023	65178	+	NM_001005218|OR5B21|219968|olfactory receptor, family 5, subfamily B, member 21##BC136947|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12##BC136948|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12##NM_001004733|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12##BC136923|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2##BC136922|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2##NM_001005566|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2##BC007490|LPXN|9404|leupaxin##BC019035|LPXN|9404|leupaxin##AK313306|LPXN|9404|leupaxin##AK223165|LPXN|9404|leupaxin##AK301093|LPXN|9404|leupaxin##AF062075|LPXN|9404|leupaxin##NM_004811|LPXN|9404|leupaxin##BC034230|LPXN|9404|leupaxin##AK300955|LPXN|9404|leupaxin##NM_001143995|LPXN|9404|leupaxin##AK299264|LPXN|9404|leupaxin##BC051743|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_001197051|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_053023|ZFP91|80829|zinc finger protein 91 homolog (mouse)	0.994288	CTCF.p2:11:0.994
chr1	55841454	55841602	reg1015709.p1	9.180	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-160444	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-160492	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-336304	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	1203491	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	1203602	-	AK312439 TSC_hg19_v1_chr1_-_57045216	1203689	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.858569	CTCF.p2:-10:0.859
chr17	67391004	67391123	reg1015260.p1	9.180	+	TSC_hg19_v1_chr17_-_67323275 BC029426 AJ512612 AJ275973 AK292592 NM_172232	-67774	-	AK096664 NM_018672	-79290	-	AY028900 NM_080282 AY247065	-150093	-	AK290747 NM_002758 U39065 AK225719 X96757 BC012009	19813	+	TSC_hg19_v1_chr17_+_67498396 U39064	107417	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	680367	+	BC029426|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ512612|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ275973|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AK292592|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_172232|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AK096664|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_018672|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6##NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6##U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6##X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6##U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	0.781279	CTCF.p2:-23:0.781
chr2	107087249	107087358	reg1014080.p1	9.180	+	NM_001144013	-2503	-	TSC_hg19_v1_chr2_-_106810781 NM_025076	-276498	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	-276545	-	FJ433885 TSC_hg19_v1_chr2_-_107502508	415182	-	AB058780 NM_001142351 TSC_hg19_v1_chr2_-_107502624	415316	-	TSC_hg19_v1_chr2_-_107503063 FJ433884	415759	-	NM_001144013|RGPD3|653489|RANBP2-like and GRIP domain containing 3##NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	0.923469	CTCF.p2:7:0.923
chr12	90647764	90647906	reg1015951.p1	9.179	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-544290	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-545148	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-597984	-	BC026075 BC024183 BC027600 BC034491 NM_152638	701116	-	U59111 TSC_hg19_v1_chr12_-_91398750	750912	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	750944	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.261815	CTCF.p2:52:0.262
chr1	42334346	42334494	reg1014299.p1	9.179	+	BC034393 X55177 M65199 NM_001956	-384101	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-626584	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-626635	-	TSC_hg19_v1_chr1_-_42384357 BC040942	49922	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	49953	-	TSC_hg19_v1_chr1_-_42501606 BC046120	167209	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.495415	CTCF.p2:4:0.495
chr17	7963669	7963800	reg1015153.p1	9.179	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	-3532	+	AK298095 NM_001039130 NM_001039131 NM_001141 AK292779 AK300554 BC063647 U78294 BC035217 BC033294 AB590334 DQ891345 EU176579 AF468051 AF468052 AF468053 AF468054	-21322	+	DQ426876 NM_000180 M92432	-57783	+	TSC_hg19_v1_chr17_+_7982776 AK096086 BC046191	19041	+	AF038461 NM_001139	27286	-	AJ269499 AK313677 NM_021628	58098	-	AK298095|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039130|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039131|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001141|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK292779|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK300554|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC063647|ALOX15B|247|arachidonate 15-lipoxygenase, type B##U78294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC035217|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC033294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##DQ891345|ALOX15B|247|arachidonate 15-lipoxygenase, type B##EU176579|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468051|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468052|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468053|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468054|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_000180|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##M92432|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##AF038461|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##NM_001139|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##AJ269499|ALOXE3|59344|arachidonate lipoxygenase 3##AK313677|ALOXE3|59344|arachidonate lipoxygenase 3##NM_021628|ALOXE3|59344|arachidonate lipoxygenase 3	0.0	
chr11	71894583	71894743	reg1015480.p1	9.178	+	BC030285 NM_000804 BC126398	-47887	+	TSC_hg19_v1_chr11_-_71823742 AK311146 AK222622 BC005156 BC005393 AF077206 NM_014042 AL080071	-70882	-	TSC_hg19_v1_chr11_-_71814398 NM_017907	-80262	-	J05013 NM_016724 NM_016725 BC002947 AK223527 M28099	6028	+	NM_000802	6295	+	NM_016729 U78793 U78794 S73490 AB590148 DQ892744 DQ895990 BT007158 CR542019 M25317 M35069	8566	+	BC030285|FOLR3|2352|folate receptor 3 (gamma)##NM_000804|FOLR3|2352|folate receptor 3 (gamma)##BC126398|FOLR3|2352|folate receptor 3 (gamma)##AK311146|C11orf51|25906|chromosome 11 open reading frame 51##AK222622|C11orf51|25906|chromosome 11 open reading frame 51##BC005156|C11orf51|25906|chromosome 11 open reading frame 51##BC005393|C11orf51|25906|chromosome 11 open reading frame 51##AF077206|C11orf51|25906|chromosome 11 open reading frame 51##NM_014042|C11orf51|25906|chromosome 11 open reading frame 51##AL080071|C11orf51|25906|chromosome 11 open reading frame 51##NM_017907|LAMTOR1|55004|late endosomal/lysosomal adaptor, MAPK and MTOR activator 1##J05013|FOLR1|2348|folate receptor 1 (adult)##NM_016724|FOLR1|2348|folate receptor 1 (adult)##NM_016725|FOLR1|2348|folate receptor 1 (adult)##BC002947|FOLR1|2348|folate receptor 1 (adult)##AK223527|FOLR1|2348|folate receptor 1 (adult)##M28099|FOLR1|2348|folate receptor 1 (adult)##NM_000802|FOLR1|2348|folate receptor 1 (adult)##NM_016729|FOLR1|2348|folate receptor 1 (adult)##U78793|FOLR1|2348|folate receptor 1 (adult)##U78794|FOLR1|2348|folate receptor 1 (adult)##S73490|FOLR1|2348|folate receptor 1 (adult)##DQ892744|FOLR1|2348|folate receptor 1 (adult)##DQ895990|FOLR1|2348|folate receptor 1 (adult)##BT007158|FOLR1|2348|folate receptor 1 (adult)##CR542019|FOLR1|2348|folate receptor 1 (adult)##M25317|FOLR1|2348|folate receptor 1 (adult)##M35069|FOLR1|2348|folate receptor 1 (adult)	0.952718	CTCF.p2:2:0.953
chr15	56788881	56789008	reg1014047.p2	9.178	+	TSC_hg19_v1_chr15_-_56757262 BC031046 AK310029 BC012554 BC034991 AK002084 NM_018365	-31658	-	TSC_hg19_v1_chr15_+_56657623 AK294960 BC028119 NM_198524 AL832050	-131315	+	TSC_hg19_v1_chr15_-_56535479 NM_022841	-253462	-	TSC_hg19_v1_chr15_-_57025690 AB046804 BC053649 BC064359 AK310882 AK289739 BC130451 BC136412	236768	-	TSC_hg19_v1_chr15_-_57025818 BX641000 BX640707 NM_001002843 NM_001002844 NM_017661 AK295159	236888	-	TSC_hg19_v1_chr15_-_57210733 AK096657 BC036541	421792	-	BC031046|MNS1|55329|meiosis-specific nuclear structural 1##BC012554|MNS1|55329|meiosis-specific nuclear structural 1##BC034991|MNS1|55329|meiosis-specific nuclear structural 1##AK002084|MNS1|55329|meiosis-specific nuclear structural 1##NM_018365|MNS1|55329|meiosis-specific nuclear structural 1##AK294960|TEX9|374618|testis expressed 9##BC028119|TEX9|374618|testis expressed 9##NM_198524|TEX9|374618|testis expressed 9##AL832050|TEX9|374618|testis expressed 9##NM_022841|RFX7|64864|regulatory factor X, 7##AB046804|ZNF280D|54816|zinc finger protein 280D##BC053649|ZNF280D|54816|zinc finger protein 280D##BC064359|ZNF280D|54816|zinc finger protein 280D##AK310882|ZNF280D|54816|zinc finger protein 280D##AK289739|ZNF280D|54816|zinc finger protein 280D##BC130451|ZNF280D|54816|zinc finger protein 280D##BC136412|ZNF280D|54816|zinc finger protein 280D##BX641000|ZNF280D|54816|zinc finger protein 280D##BX640707|ZNF280D|54816|zinc finger protein 280D##NM_001002843|ZNF280D|54816|zinc finger protein 280D##NM_001002844|ZNF280D|54816|zinc finger protein 280D##NM_017661|ZNF280D|54816|zinc finger protein 280D##AK295159|ZNF280D|54816|zinc finger protein 280D##AK096657|LOC145783|145783|uncharacterized LOC145783	0.996333	CTCF.p2:-16:0.996
chr16	32000618	32000749	reg1015578.p1	9.178	+	TSC_hg19_v1_chr16_+_31885159 BC036367 BC127088 BC127089 AK292573	-115479	+	AF220492 TSC_hg19_v1_chr16_+_31885131	-115551	+	TSC_hg19_v1_chr16_+_31885114 AK096390	-115567	+	TSC_hg19_v1_chr16_-_32199418 AK300387	198736	-	AB023508 AB023509 BC096700 BC099842 NM_001243722 AK312220 CR541650	263975	+	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	686750	-	BC036367|ZNF267|10308|zinc finger protein 267##BC127088|ZNF267|10308|zinc finger protein 267##BC127089|ZNF267|10308|zinc finger protein 267##AK292573|ZNF267|10308|zinc finger protein 267##AF220492|ZNF267|10308|zinc finger protein 267##AK096390|ZNF267|10308|zinc finger protein 267##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AB023508|TP53TG3|24150|TP53 target 3##AB023509|TP53TG3|24150|TP53 target 3##BC096700|TP53TG3|24150|TP53 target 3##BC099842|TP53TG3|24150|TP53 target 3##NM_001243722|LOC729264|729264|TP53-target gene 3 protein-like##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3	0.998744	CTCF.p2:12:0.999
chr16	86013286	86013441	reg1011875.p1	9.178	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-80577	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-180028	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-180058	+	TSC_hg19_v1_chr16_-_86542463 AK091834	529101	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	530793	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	530877	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.063635	
chr3	151636153	151636289	reg1014135.p2	9.178	+	TSC_hg19_v1_chr3_+_151591430 AK290420 NM_033050 BC030948 AF247785	-44768	+	NM_001086 L32179 BC020706 AK290628 BC032309 CU689322	-104317	+	TSC_hg19_v1_chr3_+_151488214 BC014344	-147991	+	NM_021038 NM_207292	349607	+	TSC_hg19_v1_chr3_+_151986753 BC050535 BC043493	350521	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	351124	-	AK290420|SUCNR1|56670|succinate receptor 1##NM_033050|SUCNR1|56670|succinate receptor 1##BC030948|SUCNR1|56670|succinate receptor 1##AF247785|SUCNR1|56670|succinate receptor 1##NM_001086|AADAC|13|arylacetamide deacetylase (esterase)##L32179|AADAC|13|arylacetamide deacetylase (esterase)##BC020706|AADAC|13|arylacetamide deacetylase (esterase)##AK290628|AADAC|13|arylacetamide deacetylase (esterase)##BC032309|AADAC|13|arylacetamide deacetylase (esterase)##BC014344|LOC201651|201651|arylacetamide deacetylase (esterase) pseudogene##NM_021038|MBNL1|4154|muscleblind-like (Drosophila)##NM_207292|MBNL1|4154|muscleblind-like (Drosophila)##BC050535|MBNL1|4154|muscleblind-like (Drosophila)##BC043493|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093	0.907723	CTCF.p2:19:0.908
chr1	27729595	27729703	reg1013068.p2	9.177	+	BC032702 NM_005281 TSC_hg19_v1_chr1_+_27719158 AK291185 AK314868	-10483	+	BC137466 AY358761 NM_207397	-19857	-	AY358081 CR456808 DQ892028 DQ895220 AK309540 AK075140 AK309576 BC020731 NM_003665 NM_173452 AY358283	-28334	-	BC001524 BC001855 AK024540 TSC_hg19_v1_chr1_-_27732180 AY007122	2535	-	TSC_hg19_v1_chr1_-_27816621 AK303011 BC032724 BC050093 BC040943	86951	-	TSC_hg19_v1_chr1_-_27816670 BC012329	87022	-	BC032702|GPR3|2827|G protein-coupled receptor 3##NM_005281|GPR3|2827|G protein-coupled receptor 3##AK291185|GPR3|2827|G protein-coupled receptor 3##AK314868|GPR3|2827|G protein-coupled receptor 3##BC137466|CD164L2|388611|CD164 sialomucin-like 2##AY358761|CD164L2|388611|CD164 sialomucin-like 2##NM_207397|CD164L2|388611|CD164 sialomucin-like 2##AY358081|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##CR456808|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##DQ892028|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##DQ895220|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AK309540|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AK075140|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##BC020731|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_003665|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_173452|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AY358283|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##BC001524|WASF2|10163|WAS protein family, member 2##BC001855|WASF2|10163|WAS protein family, member 2##AK024540|WASF2|10163|WAS protein family, member 2##AY007122|WASF2|10163|WAS protein family, member 2##AK303011|WASF2|10163|WAS protein family, member 2##BC032724|WASF2|10163|WAS protein family, member 2##BC040943|WASF2|10163|WAS protein family, member 2##BC012329|WASF2|10163|WAS protein family, member 2	0.0	
chr18	7038350	7038470	reg1012412.p1	9.177	+	NM_001010000 BX648684 AK308259 AK302026	-203945	+	NM_001243517	-526996	+	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	-623495	-	BC144590 NM_005559 X58531	79374	-	NM_001105581	192726	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	528907	+	NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M	0.010297	
chr12	46519025	46519119	reg1012472.p2	9.176	+	TSC_hg19_v1_chr12_-_46385857 AK026473	-133197	-	TSC_hg19_v1_chr12_-_46384378 NM_004719	-134647	-	AK096682 TSC_hg19_v1_chr12_-_46384348 AF030234	-134725	-	AK074851 CU679761 DQ891017 EU176550 AK074949 AK313731 TSC_hg19_v1_chr12_-_46633674	114541	-	TSC_hg19_v1_chr12_-_46662567 AF247166	143494	-	TSC_hg19_v1_chr12_-_46662776 BC010620 BX648676	143671	-	AK026473|SCAF11|9169|SR-related CTD-associated factor 11##NM_004719|SCAF11|9169|SR-related CTD-associated factor 11##AK096682|SCAF11|9169|SR-related CTD-associated factor 11##AF030234|SCAF11|9169|SR-related CTD-associated factor 11##AK074851|SLC38A1|81539|solute carrier family 38, member 1##DQ891017|SLC38A1|81539|solute carrier family 38, member 1##EU176550|SLC38A1|81539|solute carrier family 38, member 1##AK074949|SLC38A1|81539|solute carrier family 38, member 1##AK313731|SLC38A1|81539|solute carrier family 38, member 1##AF247166|SLC38A1|81539|solute carrier family 38, member 1##BC010620|SLC38A1|81539|solute carrier family 38, member 1##BX648676|SLC38A1|81539|solute carrier family 38, member 1	0.982996	CTCF.p2:3:0.983
chrX	155196684	155196799	reg1014557.p1	9.176	+	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	-85750	+	AK289543 AK311508 NM_005840 AK125483	-199307	+	AF373407 BC025269 BC009673 TSC_hg19_v1_chrX_-_154842563 AK291694 AK001589 NM_001184797 NM_018196	-354185	-	M84747 NM_002186 AK303178 BC025298 BC051337 S71404 CU690808	30600	+	None	None	None	None	None	None	NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7##AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)##AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon##BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon##BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon##AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon##AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon##NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon##NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon##M84747|IL9R|3581|interleukin 9 receptor##NM_002186|IL9R|3581|interleukin 9 receptor##AK303178|IL9R|3581|interleukin 9 receptor##BC025298|IL9R|3581|interleukin 9 receptor##BC051337|IL9R|3581|interleukin 9 receptor##S71404|IL9R|3581|interleukin 9 receptor	0.822508	CTCF.p2:11:0.674
chr1	11247	11387	reg1012315.p1	9.175	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	18088	-	NM_001005484	57773	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	356331	+	AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16	2.165123	CTCF.p2:-25:0.999	CTCF.p2:-83:1.000
chr13	44624731	44624833	reg1014090.p1	9.175	+	AK096044 NM_153218 TSC_hg19_v1_chr13_+_44453986 BC035749	-170776	+	NM_144974 AK056408	-170957	-	NM_001128303	-171363	+	BC029067 NM_001010897 TSC_hg19_v1_chr13_+_44947983	323200	+	U35048 TSC_hg19_v1_chr13_-_45010962 AJ222700 BC105277 BC069207	386170	-	BC146664 BC146679 TSC_hg19_v1_chr13_-_45010983 BC000456 BC016867	386197	-	AK096044|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_153218|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC035749|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC029067|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##NM_001010897|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##U35048|TSC22D1|8848|TSC22 domain family, member 1##AJ222700|TSC22D1|8848|TSC22 domain family, member 1##BC105277|TSC22D1|8848|TSC22 domain family, member 1##BC069207|TSC22D1|8848|TSC22 domain family, member 1##BC146664|TSC22D1|8848|TSC22 domain family, member 1##BC146679|TSC22D1|8848|TSC22 domain family, member 1##BC000456|TSC22D1|8848|TSC22 domain family, member 1##BC016867|TSC22D1|8848|TSC22 domain family, member 1	0.998879	CTCF.p2:5:0.999
chr17	29716530	29716636	reg1013265.p1	9.175	+	TSC_hg19_v1_chr17_-_29648631 BC035572 AK295311 AK312348 NM_001003927 NM_014210	-67885	-	TSC_hg19_v1_chr17_-_29641103 AK297087 NM_006495	-75472	-	TSC_hg19_v1_chr17_-_29641092 BC005926	-75494	-	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	2084	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	2281	+	TSC_hg19_v1_chr17_+_29815032 AK097424	98478	+	BC035572|EVI2A|2123|ecotropic viral integration site 2A##AK295311|EVI2A|2123|ecotropic viral integration site 2A##AK312348|EVI2A|2123|ecotropic viral integration site 2A##NM_001003927|EVI2A|2123|ecotropic viral integration site 2A##NM_014210|EVI2A|2123|ecotropic viral integration site 2A##AK297087|EVI2B|2124|ecotropic viral integration site 2B##NM_006495|EVI2B|2124|ecotropic viral integration site 2B##BC005926|EVI2B|2124|ecotropic viral integration site 2B##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)	0.998118	CTCF.p2:-2:0.998
chr8	135550550	135550666	reg1016997.p1	9.175	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-966511	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-1241111	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1347278	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	158186	-	TSC_hg19_v1_chr8_-_135725053 AB463359	174471	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	174666	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.599949	CTCF.p2:-14:0.255	CTCF.p2:-17:0.345
chr14	94889940	94890061	reg1016075.p1	9.174	+	TSC_hg19_v1_chr14_-_94856973 BX161449 BX247968 AK315637 X05826 X05827 NM_001002235 NM_001002236 NM_001127700 NM_001127701 NM_001127702 NM_001127703 NM_001127704 NM_001127705 NM_001127706 NM_001127707	-33009	-	TSC_hg19_v1_chr14_-_94855154 BC011991 NM_000295	-34859	-	K01396 X01683 BC015642 BX248257 TSC_hg19_v1_chr14_-_94854940 AK026174 BC070163	-35053	-	BC146962 BX248259 NM_001080451	29103	-	AY358700 AY220120 AY220119 AK301082 BC111498 AY220121 AY220118 AY185496 AY185497 NM_001042518 NM_175739	52591	-	BC040857 NM_173850	94180	-	BX161449|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BX247968|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##AK315637|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X05826|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X05827|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001002235|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001002236|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127700|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127701|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127702|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127703|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127704|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127705|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127706|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127707|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC011991|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_000295|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##K01396|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X01683|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC015642|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BX248257|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##AK026174|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC070163|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC146962|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##BX248259|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##NM_001080451|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##AY358700|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220120|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220119|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AK301082|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC111498|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220121|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220118|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185496|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185497|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_001042518|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_175739|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC040857|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12##NM_173850|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	0.01001	
chr16	18509819	18509942	reg1014610.p1	9.174	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	-945075	-	TSC_hg19_v1_chr16_+_16326508 AB463143	-2183350	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-2183392	+	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	63511	-	TSC_hg19_v1_chr16_-_18798077 AK127316	288216	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	291775	-	AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a	0.514946	CTCF.p2:15:0.515
chr3	13494398	13494510	reg1012131.p2	9.174	+	TSC_hg19_v1_chr3_-_13461832 BC020573 NM_024923	-32637	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	-32722	-	AB020713 TSC_hg19_v1_chr3_-_13384784	-109689	-	NM_024827 TSC_hg19_v1_chr3_+_13521806 AK299021 AK025426 AK025890 BC009676 NM_001136041 AK293223	27358	+	AK129883 NM_001004019 NM_001998 TSC_hg19_v1_chr3_+_13590624	96171	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	96209	+	BC020573|NUP210|23225|nucleoporin 210kDa##NM_024923|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa##AB020713|NUP210|23225|nucleoporin 210kDa##NM_024827|HDAC11|79885|histone deacetylase 11##AK299021|HDAC11|79885|histone deacetylase 11##AK025426|HDAC11|79885|histone deacetylase 11##AK025890|HDAC11|79885|histone deacetylase 11##BC009676|HDAC11|79885|histone deacetylase 11##NM_001136041|HDAC11|79885|histone deacetylase 11##AK293223|HDAC11|79885|histone deacetylase 11##AK129883|FBLN2|2199|fibulin 2##NM_001004019|FBLN2|2199|fibulin 2##NM_001998|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2	0.805261	CTCF.p2:3:0.805
chr10	126516227	126516347	reg1012926.p2	9.173	+	NM_032182 TSC_hg19_v1_chr10_+_126490387 AK296677 D63877 BC008999	-25915	+	TSC_hg19_v1_chr10_-_126480455 CU693146 AL832292 AF318345 BC026167 NM_212554	-35883	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	-83376	-	NM_017580	114404	+	AF222711 NM_022802	200165	-	TSC_hg19_v1_chr10_-_126849010 AF016507 BC072020	332739	-	NM_032182|FAM175B|23172|family with sequence similarity 175, member B##AK296677|FAM175B|23172|family with sequence similarity 175, member B##D63877|FAM175B|23172|family with sequence similarity 175, member B##BC008999|FAM175B|23172|family with sequence similarity 175, member B##AL832292|METTL10|399818|methyltransferase like 10##AF318345|METTL10|399818|methyltransferase like 10##BC026167|METTL10|399818|methyltransferase like 10##NM_212554|METTL10|399818|methyltransferase like 10##NM_014661|FAM53B|9679|family with sequence similarity 53, member B##NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1##AF222711|CTBP2|1488|C-terminal binding protein 2##NM_022802|CTBP2|1488|C-terminal binding protein 2##AF016507|CTBP2|1488|C-terminal binding protein 2##BC072020|CTBP2|1488|C-terminal binding protein 2	0.553272	CTCF.p2:-7:0.553
chr1	212988461	212988614	reg1013706.p1	9.171	+	AK293129 NM_001042552 NM_001042553 NM_001146169 NM_001146170 NM_001146171 AK304557 TSC_hg19_v1_chr1_+_212965255 BC113638 BC117485 BC143956 BC143957 AL832248 BC048115 HQ258161	-23319	+	AB528354 CU675531 DQ892899 DQ896149 AK222996 AF201941 TSC_hg19_v1_chr1_-_212965111 BC007067 AK223260 AK303250 BC036048 AF255793 AK313730 NM_001042549 NM_015471	-23416	-	TSC_hg19_v1_chr1_-_212873317 AF255346 NM_018664	-115217	-	AY640234 BC035742 NM_001024601	32431	-	TSC_hg19_v1_chr1_-_213031441 AY030238 AY030239 AK092887	42927	-	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	43143	+	AK293129|TATDN3|128387|TatD DNase domain containing 3##NM_001042552|TATDN3|128387|TatD DNase domain containing 3##NM_001042553|TATDN3|128387|TatD DNase domain containing 3##NM_001146169|TATDN3|128387|TatD DNase domain containing 3##NM_001146170|TATDN3|128387|TatD DNase domain containing 3##NM_001146171|TATDN3|128387|TatD DNase domain containing 3##AK304557|TATDN3|128387|TatD DNase domain containing 3##BC113638|TATDN3|128387|TatD DNase domain containing 3##BC117485|TATDN3|128387|TatD DNase domain containing 3##BC143956|TATDN3|128387|TatD DNase domain containing 3##BC143957|TATDN3|128387|TatD DNase domain containing 3##AL832248|TATDN3|128387|TatD DNase domain containing 3##BC048115|TATDN3|128387|TatD DNase domain containing 3##HQ258161|TATDN3|128387|TatD DNase domain containing 3##DQ892899|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##DQ896149|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK222996|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF201941|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC007067|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK223260|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK303250|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC036048|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF255793|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK313730|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001042549|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_015471|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF255346|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##NM_018664|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##AY640234|C1orf227|149643|chromosome 1 open reading frame 227##BC035742|C1orf227|149643|chromosome 1 open reading frame 227##NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227##AY030238|FLVCR1-AS1|642946|FLVCR1 antisense RNA 1 (non-protein coding)##AY030239|FLVCR1-AS1|642946|FLVCR1 antisense RNA 1 (non-protein coding)##AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1	0.958419	CTCF.p2:-1:0.958
chr16	30649393	30649536	reg1015608.p1	9.171	+	AK310459 AB065282 BC014000 NM_138447 TSC_hg19_v1_chr16_-_30621684	-27808	-	TSC_hg19_v1_chr16_-_30597103 AK309511 EU446576 AK292465 BC040642 AK298848 AK056692 NM_152458	-52489	-	NM_001024683 NM_145271	-65737	-	TSC_hg19_v1_chr16_+_30662098 CR936781 AK125716	12636	+	TSC_hg19_v1_chr16_+_30662286 BC010232 BC050677 NM_024031 BC011573 BC000119 AK074783	12801	+	NM_001105079	26313	+	AK310459|ZNF689|115509|zinc finger protein 689##AB065282|ZNF689|115509|zinc finger protein 689##BC014000|ZNF689|115509|zinc finger protein 689##NM_138447|ZNF689|115509|zinc finger protein 689##AK309511|ZNF785|146540|zinc finger protein 785##EU446576|ZNF785|146540|zinc finger protein 785##AK292465|ZNF785|146540|zinc finger protein 785##BC040642|ZNF785|146540|zinc finger protein 785##AK298848|ZNF785|146540|zinc finger protein 785##AK056692|ZNF785|146540|zinc finger protein 785##NM_152458|ZNF785|146540|zinc finger protein 785##NM_001024683|ZNF688|146542|zinc finger protein 688##NM_145271|ZNF688|146542|zinc finger protein 688##CR936781|PRR14|78994|proline rich 14##AK125716|PRR14|78994|proline rich 14##BC010232|PRR14|78994|proline rich 14##BC050677|PRR14|78994|proline rich 14##NM_024031|PRR14|78994|proline rich 14##BC011573|PRR14|78994|proline rich 14##BC000119|PRR14|78994|proline rich 14##AK074783|PRR14|78994|proline rich 14##NM_001105079|FBRS|64319|fibrosin	0.90823	CTCF.p2:6:0.908
chrUn_gl000227	16689	16802	reg1016028.p1	9.171	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.283133	CTCF.p2:16:0.283
chr6	127508191	127508329	reg1015378.p1	9.170	+	NM_032784 AF251057	-68209	+	TSC_hg19_v1_chr6_+_127439818 BC022367	-68449	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	-846990	+	NM_001242851 NM_001242844 NM_001242849 NM_001242852 TSC_hg19_v1_chr6_+_127587982 NM_001242845 NM_001242846 NM_001242850 NM_030963	79644	+	TSC_hg19_v1_chr6_+_127588008 AK027558 AL136829 AX721119	79746	+	AK025796 NM_001139510	155291	-	NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3##BC022367|RSPO3|84870|R-spondin 3##BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##NM_001242851|RNF146|81847|ring finger protein 146##NM_001242844|RNF146|81847|ring finger protein 146##NM_001242849|RNF146|81847|ring finger protein 146##NM_001242852|RNF146|81847|ring finger protein 146##NM_001242845|RNF146|81847|ring finger protein 146##NM_001242846|RNF146|81847|ring finger protein 146##NM_001242850|RNF146|81847|ring finger protein 146##NM_030963|RNF146|81847|ring finger protein 146##AK027558|RNF146|81847|ring finger protein 146##AL136829|RNF146|81847|ring finger protein 146##AK025796|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001139510|ECHDC1|55862|enoyl CoA hydratase domain containing 1	0.759474	CTCF.p2:-21:0.759
chr12	15374374	15374489	reg1013184.p2	9.169	+	AK311016 BC007997 AK295343 AK313881 NM_001190726 NM_032918	-81	-	NM_006205 DQ980604 D45399	-248465	+	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	-259883	-	NM_002848 NM_030667 TSC_hg19_v1_chr12_+_15475264 AB209729	100829	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	101120	+	NM_030668 NM_030669 NM_030670 NM_030671 AF152378 AF187042 AF187043 AF187044	324850	+	AK311016|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##BC007997|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK295343|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK313881|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_001190726|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_032918|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AB209729|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	0.993406	CTCF.p2:0:0.993
chr14	51686704	51686825	reg1012399.p2	9.169	+	NM_015163 NM_052978	-124343	-	TSC_hg19_v1_chr14_-_51562045 AK055388	-124711	-	CU680598 TSC_hg19_v1_chr14_-_51561792 BC013414 D87458	-124987	-	NM_030755 AB048246 TSC_hg19_v1_chr14_+_51706980 AK302416 BC036460 BC016769 BC050366 AK075395 BC032834 AK303134 AL080080 BC056874 AY358640 AK312905 DQ891674 DQ894860 CU690352	20185	+	AL833158 NM_001042481	269090	+	TSC_hg19_v1_chr14_+_52118627 BX161430 NM_152330 BC020521 AK315764 AK055545 BX647863	431866	+	NM_015163|TRIM9|114088|tripartite motif containing 9##NM_052978|TRIM9|114088|tripartite motif containing 9##AK055388|TRIM9|114088|tripartite motif containing 9##BC013414|TRIM9|114088|tripartite motif containing 9##D87458|TRIM9|114088|tripartite motif containing 9##NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1##AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1##BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1##BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1##BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1##AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1##BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1##AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1##AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1##BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1##AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1##AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1##AL833158|FRMD6|122786|FERM domain containing 6##NM_001042481|FRMD6|122786|FERM domain containing 6##BX161430|FRMD6|122786|FERM domain containing 6##NM_152330|FRMD6|122786|FERM domain containing 6##BC020521|FRMD6|122786|FERM domain containing 6##AK315764|FRMD6|122786|FERM domain containing 6##AK055545|FRMD6|122786|FERM domain containing 6##BX647863|FRMD6|122786|FERM domain containing 6	0.992645	CTCF.p2:0:0.993
chr22	37249685	37249816	reg1014416.p2	9.169	+	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	-34231	-	AL022729 TSC_hg19_v1_chr22_-_37172162 AK307105 AK307382 BC000566 AB209424 NM_001177701 NM_006860	-77595	-	NM_001177702	-85677	-	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	7358	+	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	59908	+	BC042635 CR456416 NM_001163857 NM_178552	154107	-	BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##AL022729|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307105|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307382|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC000566|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AB209424|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177701|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_006860|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177702|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##BC042635|C22orf33|339669|chromosome 22 open reading frame 33##CR456416|C22orf33|339669|chromosome 22 open reading frame 33##NM_001163857|C22orf33|339669|chromosome 22 open reading frame 33##NM_178552|C22orf33|339669|chromosome 22 open reading frame 33	0.997796	CTCF.p2:-12:0.998
chr5	129444981	129445119	reg1015376.p1	9.169	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	-204563	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-648997	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-1014625	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	1055881	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	1055940	-	TSC_hg19_v1_chr5_-_130501019 NM_005340	1055993	-	BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1##NM_005340|HINT1|3094|histidine triad nucleotide binding protein 1	0.927018	CTCF.p2:-9:0.927
chr1	27324253	27324369	reg1013670.p1	9.168	+	TSC_hg19_v1_chr1_+_27320182 NM_001013642 BC069216	-4118	+	CR749558 AK091952 AX747274 NM_152365	-37424	-	AF086922 AF100760 TSC_hg19_v1_chr1_+_27248250 BC021139 AF241788 AB019408 BC006147 BC003132 AF130736 BC002399 AM392722 AM393251 AB463146	-76019	+	BC012790 BC014160 NM_052943 TSC_hg19_v1_chr1_-_27339338	15023	-	TSC_hg19_v1_chr1_-_27339448 AK122816	15143	-	M96066 S68616 NM_003047 TSC_hg19_v1_chr1_-_27481521	157150	-	NM_001013642|TRNP1|388610|TMF1-regulated nuclear protein 1##BC069216|TRNP1|388610|TMF1-regulated nuclear protein 1##CR749558|C1orf172|126695|chromosome 1 open reading frame 172##AK091952|C1orf172|126695|chromosome 1 open reading frame 172##NM_152365|C1orf172|126695|chromosome 1 open reading frame 172##AF086922|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AF100760|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##BC021139|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AF241788|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AB019408|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##BC006147|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##BC003132|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AF130736|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##BC002399|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AM392722|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AM393251|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##BC012790|FAM46B|115572|family with sequence similarity 46, member B##BC014160|FAM46B|115572|family with sequence similarity 46, member B##NM_052943|FAM46B|115572|family with sequence similarity 46, member B##AK122816|FAM46B|115572|family with sequence similarity 46, member B##M96066|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##S68616|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_003047|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1	0.999907	CTCF.p2:-5:1.000
chr7	117025996	117026135	reg1015011.p1	9.168	+	BC078170 AK056742 NM_003391 X07876	-62730	-	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	-365700	+	TSC_hg19_v1_chr7_+_116660271 AK093212	-365798	+	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	41480	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	93973	+	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	487416	-	BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##AK093212|ST7|7982|suppression of tumorigenicity 7##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2	0.703861	CTCF.p2:18:0.704
chr6	34383158	34383273	reg1013858.p1	9.167	+	TSC_hg19_v1_chr6_-_34360442 NM_006703	-22764	-	TSC_hg19_v1_chr6_-_34360425 BC007727	-22795	-	TSC_hg19_v1_chr6_-_34360360 AK313440	-22880	-	TSC_hg19_v1_chr6_-_34393847 NM_001203245 U14972 BC070235 BC001032 BC071946 AK311797 NM_001014 NM_001202470 NM_001204091	10634	-	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	50689	+	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	99439	+	NM_006703|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##BC007727|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AK313440|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##NM_001203245|RPS10|6204|ribosomal protein S10##U14972|RPS10|6204|ribosomal protein S10##BC070235|RPS10|6204|ribosomal protein S10##BC001032|RPS10|6204|ribosomal protein S10##BC071946|RPS10|6204|ribosomal protein S10##AK311797|RPS10|6204|ribosomal protein S10##NM_001014|RPS10|6204|ribosomal protein S10##NM_001202470|RPS10-NUDT3|100529239|RPS10-NUDT3 readthrough##NM_001204091|RPS10|6204|ribosomal protein S10##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1	0.832092	CTCF.p2:7:0.832
chr8	146030529	146030643	reg1011701.p2	9.167	+	TSC_hg19_v1_chr8_+_146024301 AK131440 NM_213605 AK096527 AK097278	-6264	+	AK289459 TSC_hg19_v1_chr8_-_146017781 BC093064 NM_000973 AK309619	-12793	-	AK301073 D28421 TSC_hg19_v1_chr8_-_146017776	-12810	-	AK127225 TSC_hg19_v1_chr8_-_146052601	21958	-	NM_003416 TSC_hg19_v1_chr8_+_146052963 AK096025 AK301561 AK308002 BX647998 BC058923 AK313745 AK300001 M29580	22371	+	TSC_hg19_v1_chr8_-_146078415 BC003055 AK023070 BC065729	47800	-	AK131440|ZNF517|340385|zinc finger protein 517##NM_213605|ZNF517|340385|zinc finger protein 517##AK096527|ZNF517|340385|zinc finger protein 517##AK097278|ZNF517|340385|zinc finger protein 517##AK289459|RPL8|6132|ribosomal protein L8##BC093064|RPL8|6132|ribosomal protein L8##NM_000973|RPL8|6132|ribosomal protein L8##AK309619|RPL8|6132|ribosomal protein L8##AK301073|RPL8|6132|ribosomal protein L8##AK127225|LOC100130027|100130027|uncharacterized LOC100130027##NM_003416|ZNF7|7553|zinc finger protein 7##AK096025|ZNF7|7553|zinc finger protein 7##AK301561|ZNF7|7553|zinc finger protein 7##AK308002|ZNF7|7553|zinc finger protein 7##BX647998|ZNF7|7553|zinc finger protein 7##BC058923|ZNF7|7553|zinc finger protein 7##AK313745|ZNF7|7553|zinc finger protein 7##AK300001|ZNF7|7553|zinc finger protein 7##M29580|ZNF7|7553|zinc finger protein 7##BC003055|COMMD5|28991|COMM domain containing 5##AK023070|COMMD5|28991|COMM domain containing 5##BC065729|COMMD5|28991|COMM domain containing 5	0.694155	CTCF.p2:3:0.694
chr16	51796137	51796259	reg1012405.p2	9.166	+	BC113881 BC113906 BC131548 Y18265 TSC_hg19_v1_chr16_-_51185251 AK295103 NM_002968	-610786	-	AK307835 NM_001127892	-611691	-	TSC_hg19_v1_chr16_+_50776066 AF161542 NM_001042412 BC012342	-1020140	+	NM_001242473	311648	-	NM_001080430	784607	-	AK299202 NM_001146188	785515	-	BC113881|SALL1|6299|sal-like 1 (Drosophila)##BC113906|SALL1|6299|sal-like 1 (Drosophila)##BC131548|SALL1|6299|sal-like 1 (Drosophila)##Y18265|SALL1|6299|sal-like 1 (Drosophila)##AK295103|SALL1|6299|sal-like 1 (Drosophila)##NM_002968|SALL1|6299|sal-like 1 (Drosophila)##AK307835|SALL1|6299|sal-like 1 (Drosophila)##NM_001127892|SALL1|6299|sal-like 1 (Drosophila)##AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)##BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001242473|LOC388276|388276|hCG2045437##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3	0.999449	CTCF.p2:5:0.999
chr21	29073429	29073563	reg1014597.p1	9.166	+	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	-734057	-	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	-855784	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	-856025	-	TSC_hg19_v1_chr21_-_30257688 AB590951 BC011554 AK314100 AK225515 AF139682 NM_013240 NM_182749	1184167	-	BC007525 AB384515 TSC_hg19_v1_chr21_-_30365185 AF161350 AB018257 BC150284 AB621822 BC029371 BC140790 AK001915 BC031633 NM_015565	1291697	-	CU676110 TSC_hg19_v1_chr21_-_30391645 AF212232 BC012546 Y19009 BC017912 AK000056 AL355727 NM_016940 AK223357	1318151	-	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##BC007525|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF161350|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AB018257|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC150284|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC029371|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC140790|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AK001915|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC031633|LTN1|26046|listerin E3 ubiquitin protein ligase 1##NM_015565|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF212232|RWDD2B|10069|RWD domain containing 2B##BC012546|RWDD2B|10069|RWD domain containing 2B##Y19009|RWDD2B|10069|RWD domain containing 2B##BC017912|RWDD2B|10069|RWD domain containing 2B##AK000056|RWDD2B|10069|RWD domain containing 2B##AL355727|RWDD2B|10069|RWD domain containing 2B##NM_016940|RWDD2B|10069|RWD domain containing 2B##AK223357|RWDD2B|10069|RWD domain containing 2B	0.990326	CTCF.p2:10:0.990
chr8	105690986	105691097	reg1013025.p1	9.165	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-89794	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-89866	-	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	-211826	-	AF119334 BC109222 BC109223 NM_012082	640105	+	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	1591382	+	AK296561 NM_001198532	1769110	+	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1	0.378367	CTCF.p2:13:0.378
chr10	51835446	51835557	reg1012872.p2	9.164	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-7779	+	TSC_hg19_v1_chr10_+_51827685 BC150611 AK001686 NM_001005751 AK295129	-7821	+	NM_001077665	-87424	+	NM_018232	2384	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	172839	-	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	548202	-	AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##BC150611|FAM21C|253725|family with sequence similarity 21, member C##AK001686|FAM21A|387680|family with sequence similarity 21, member A##NM_001005751|FAM21A|387680|family with sequence similarity 21, member A##AK295129|FAM21A|387680|family with sequence similarity 21, member A##NM_001077665|AGAP6|414189|ArfGAP with GTPase domain, ankyrin repeat and PH domain 6##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1	0.968293	CTCF.p2:2:0.968
chr1	54547439	54547581	reg1016426.p1	9.163	+	AK096488 AK056674 NM_153035 BC035374	-28211	+	AK075187 TSC_hg19_v1_chr1_-_54519086 AK074636 AF290615 AX775907 NM_004872	-28423	-	TSC_hg19_v1_chr1_-_54518929 AY359029	-28588	-	NM_201546	71932	-	TSC_hg19_v1_chr1_-_54665704 BC012781 BC038388 AK090456 BC071735 BC064419 AK122760 NM_001031672	118197	-	AK024572 NM_016491 TSC_hg19_v1_chr1_+_54665839	118332	+	AK096488|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##AK056674|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##NM_153035|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##BC035374|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##AK075187|TMEM59|9528|transmembrane protein 59##AF290615|TMEM59|9528|transmembrane protein 59##AX775907|TMEM59|9528|transmembrane protein 59##NM_004872|TMEM59|9528|transmembrane protein 59##AY359029|TMEM59|9528|transmembrane protein 59##NM_201546|CDCP2|200008|CUB domain containing protein 2##BC012781|CYB5RL|606495|cytochrome b5 reductase-like##BC038388|CYB5RL|606495|cytochrome b5 reductase-like##AK090456|CYB5RL|606495|cytochrome b5 reductase-like##BC071735|CYB5RL|606495|cytochrome b5 reductase-like##BC064419|CYB5RL|606495|cytochrome b5 reductase-like##NM_001031672|CYB5RL|606495|cytochrome b5 reductase-like##AK024572|MRPL37|51253|mitochondrial ribosomal protein L37##NM_016491|MRPL37|51253|mitochondrial ribosomal protein L37	0.999604	CTCF.p2:7:1.000
chr21	33973448	33973560	reg1014385.p2	9.163	+	AK223529 AF115967 BC022024 BC033855 AK058078 NM_144659	-15709	-	AY358787 NM_058187	-188753	+	TSC_hg19_v1_chr21_+_33765423 BC007928 AK026376	-208067	+	DQ655907 DQ655908 TSC_hg19_v1_chr21_-_33984495 CU674350 DQ656039	11018	-	TSC_hg19_v1_chr21_-_33984683 AF282851 BC000709	11174	-	AL355729 TSC_hg19_v1_chr21_-_33984897 AK055328 AK223318 AK225697 AK300970 AK000474 AK098577 NM_021254	11390	-	AK223529|TCP10L|140290|t-complex 10 (mouse)-like##AF115967|TCP10L|140290|t-complex 10 (mouse)-like##BC022024|TCP10L|140290|t-complex 10 (mouse)-like##BC033855|TCP10L|140290|t-complex 10 (mouse)-like##AK058078|TCP10L|140290|t-complex 10 (mouse)-like##NM_144659|TCP10L|140290|t-complex 10 (mouse)-like##AY358787|C21orf63|59271|chromosome 21 open reading frame 63##NM_058187|C21orf63|59271|chromosome 21 open reading frame 63##BC007928|C21orf119|84996|chromosome 21 open reading frame 119##AK026376|C21orf119|84996|chromosome 21 open reading frame 119##DQ655907|C21orf59|56683|chromosome 21 open reading frame 59##DQ655908|C21orf59|56683|chromosome 21 open reading frame 59##DQ656039|C21orf59|56683|chromosome 21 open reading frame 59##AF282851|C21orf59|56683|chromosome 21 open reading frame 59##BC000709|C21orf59|56683|chromosome 21 open reading frame 59##AK055328|C21orf59|56683|chromosome 21 open reading frame 59##AK223318|C21orf59|56683|chromosome 21 open reading frame 59##AK225697|C21orf59|56683|chromosome 21 open reading frame 59##AK300970|C21orf59|56683|chromosome 21 open reading frame 59##AK000474|C21orf59|56683|chromosome 21 open reading frame 59##AK098577|C21orf59|56683|chromosome 21 open reading frame 59##NM_021254|C21orf59|56683|chromosome 21 open reading frame 59	0.965682	CTCF.p2:-2:0.966
chr3	103992031	103992168	reg1013197.p1	9.163	+	AY090780 NM_175056 BC143817	-1838232	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-2423725	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-2445139	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	1093481	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	1093723	+	CR749655 TSC_hg19_v1_chr3_-_105421064	1428955	-	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.359941	CTCF.p2:-16:0.360
chr12	112636076	112636199	reg1012604.p1	9.162	+	TSC_hg19_v1_chr12_-_112630525 AF174498	-5609	-	TSC_hg19_v1_chr12_+_112563363 AK122620 AK291331 AK295474 AB007447	-72746	+	TSC_hg19_v1_chr12_+_112563341 AK309916 AK312601 NM_001143906 NM_006700	-72815	+	TSC_hg19_v1_chr12_-_112819755 NM_001109662	183688	-	TSC_hg19_v1_chr12_-_112847411 BC022444 X69391 BC004138 BC104824 BC104826 AK308680 NM_000970 NM_001024662	211268	-	NM_002834 TSC_hg19_v1_chr12_+_112856698	220479	+	AF174498|C12orf51|283450|chromosome 12 open reading frame 51##AK122620|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK291331|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK295474|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AB007447|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK309916|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK312601|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_001143906|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_006700|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_001109662|C12orf51|283450|chromosome 12 open reading frame 51##BC022444|RPL6|6128|ribosomal protein L6##X69391|RPL6|6128|ribosomal protein L6##BC004138|RPL6|6128|ribosomal protein L6##BC104824|RPL6|6128|ribosomal protein L6##BC104826|RPL6|6128|ribosomal protein L6##NM_000970|RPL6|6128|ribosomal protein L6##NM_001024662|RPL6|6128|ribosomal protein L6##NM_002834|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11	0.0	
chr17	19666009	19666075	reg1014796.p1	9.162	+	BC021194 BC008892 BC004370 AK314584 AK225513 M74542 AK093877 AX748347 AK225505 BC004102 NM_000691	-14377	-	NM_001135167	-17118	-	AK292193 NM_001135168	-17271	-	TSC_hg19_v1_chr17_-_19771250 BC034988 AB014523 NM_001142610 NM_014683 BC039310	105101	-	AB590263 CU677815 DQ270159 DQ891477 DQ894666 TSC_hg19_v1_chr17_-_19881134 AK312438 BC017055 AF037439 NM_007202	215020	-	TSC_hg19_v1_chr17_-_19881144 AK295180	215116	-	BC021194|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##BC008892|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##BC004370|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK314584|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK225513|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##M74542|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK093877|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK225505|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##BC004102|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##NM_000691|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##NM_001135167|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK292193|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##NM_001135168|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##BC034988|ULK2|9706|unc-51-like kinase 2 (C. elegans)##AB014523|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_001142610|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_014683|ULK2|9706|unc-51-like kinase 2 (C. elegans)##BC039310|ULK2|9706|unc-51-like kinase 2 (C. elegans)##DQ270159|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ891477|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ894666|AKAP10|11216|A kinase (PRKA) anchor protein 10##AK312438|AKAP10|11216|A kinase (PRKA) anchor protein 10##BC017055|AKAP10|11216|A kinase (PRKA) anchor protein 10##AF037439|AKAP10|11216|A kinase (PRKA) anchor protein 10##NM_007202|AKAP10|11216|A kinase (PRKA) anchor protein 10##AK295180|AKAP10|11216|A kinase (PRKA) anchor protein 10	0.0	
chr22	31503742	31503874	reg1014141.p2	9.162	+	TSC_hg19_v1_chr22_-_31503490 CU680602 BC013421 BC030236 BC042299 BC068004 NM_080430 AK308582	-276	-	AK092684 AX747671 TSC_hg19_v1_chr22_+_31489351 AK095930 AK300064 AK309502 AK095916	-14454	+	TSC_hg19_v1_chr22_+_31487319 AK301289 AK307627 AK225648 Z49989	-16484	+	TSC_hg19_v1_chr22_+_31518979 AK092859 AK293992 AX747773 BC041652 NM_001002837 AK309548 AK095944 AK126610 BC109288	15151	+	DQ892832 DQ896078 BC025316 NM_015715 AF220490	32657	-	NM_001135825 NM_152267 TSC_hg19_v1_chr22_+_31556175 AK297414 BC035684	52352	+	BC013421|SELM|140606|selenoprotein M##BC030236|SELM|140606|selenoprotein M##BC042299|SELM|140606|selenoprotein M##BC068004|SELM|140606|selenoprotein M##NM_080430|SELM|140606|selenoprotein M##AK092684|SMTN|6525|smoothelin##AK095930|SMTN|6525|smoothelin##AK300064|SMTN|6525|smoothelin##AK309502|SMTN|6525|smoothelin##AK095916|SMTN|6525|smoothelin##AK301289|SMTN|6525|smoothelin##AK307627|SMTN|6525|smoothelin##AK225648|SMTN|6525|smoothelin##Z49989|SMTN|6525|smoothelin##AK092859|INPP5J|27124|inositol polyphosphate-5-phosphatase J##AK293992|INPP5J|27124|inositol polyphosphate-5-phosphatase J##BC041652|INPP5J|27124|inositol polyphosphate-5-phosphatase J##NM_001002837|INPP5J|27124|inositol polyphosphate-5-phosphatase J##AK309548|INPP5J|27124|inositol polyphosphate-5-phosphatase J##AK095944|INPP5J|27124|inositol polyphosphate-5-phosphatase J##AK126610|INPP5J|27124|inositol polyphosphate-5-phosphatase J##BC109288|INPP5J|27124|inositol polyphosphate-5-phosphatase J##DQ892832|PLA2G3|50487|phospholipase A2, group III##DQ896078|PLA2G3|50487|phospholipase A2, group III##BC025316|PLA2G3|50487|phospholipase A2, group III##NM_015715|PLA2G3|50487|phospholipase A2, group III##AF220490|PLA2G3|50487|phospholipase A2, group III##NM_001135825|RNF185|91445|ring finger protein 185##NM_152267|RNF185|91445|ring finger protein 185##AK297414|RNF185|91445|ring finger protein 185##BC035684|RNF185|91445|ring finger protein 185	0.717984	CTCF.p2:11:0.718
chr7	37274590	37274716	reg1016264.p1	9.162	+	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	-248933	-	BC064635 NM_001039459	-249963	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-510577	-	AK291784 NM_001206482	118618	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	213815	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	213902	-	D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1	0.267993	CTCF.p2:-11:0.268
chr3	38692806	38692934	reg1016091.p1	9.161	+	M77235 NM_000335 NM_001099404 NM_001099405 NM_198056 BC051374 NM_001160160 NM_001160161	-1730	-	TSC_hg19_v1_chr3_+_38537982 AK315814	-154890	+	BC015820 TSC_hg19_v1_chr3_+_38537851 BC065368 AK023235 AK289602	-155020	+	AF117907 NM_006514	142630	-	AF109737 AF150882 NM_014139	299181	-	TSC_hg19_v1_chr3_+_39093498 AB040882 AK025513 AK297349 AK298810 AK302307 BC026353 NM_020839 BC037168 AB385469 AF468833 AL832926	400631	+	M77235|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_000335|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099404|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099405|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_198056|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##BC051374|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160160|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160161|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##AK315814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC015820|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC065368|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK023235|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK289602|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AF117907|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##NM_006514|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AB040882|WDR48|57599|WD repeat domain 48##AK025513|WDR48|57599|WD repeat domain 48##AK297349|WDR48|57599|WD repeat domain 48##AK298810|WDR48|57599|WD repeat domain 48##AK302307|WDR48|57599|WD repeat domain 48##BC026353|WDR48|57599|WD repeat domain 48##NM_020839|WDR48|57599|WD repeat domain 48##BC037168|WDR48|57599|WD repeat domain 48##AF468833|WDR48|57599|WD repeat domain 48##AL832926|WDR48|57599|WD repeat domain 48	0.0	
chr5	148751050	148751151	reg1013659.p1	9.161	+	TSC_hg19_v1_chr5_+_148737613 AF451985 BC000014	-13477	+	NM_024028 TSC_hg19_v1_chr5_+_148737608 AK075414	-13510	+	TSC_hg19_v1_chr5_+_148731227 AK091237 AX746868	-19819	+	AB590699 CR457192 BC113925 BC113946 AF152098 AF184969 AF218727 AY358931 AF110385 AF212311 NM_014443 TSC_hg19_v1_chr5_-_148758856	7722	-	TSC_hg19_v1_chr5_+_148786440 AK126481 CR933654 BX640700	35382	+	AF218004 TSC_hg19_v1_chr5_-_148930935 AK303794 BC021971 BC025371 BC007246	179824	-	AF451985|PCYOX1L|78991|prenylcysteine oxidase 1 like##BC000014|PCYOX1L|78991|prenylcysteine oxidase 1 like##NM_024028|PCYOX1L|78991|prenylcysteine oxidase 1 like##AK075414|PCYOX1L|78991|prenylcysteine oxidase 1 like##AK091237|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##CR457192|IL17B|27190|interleukin 17B##BC113925|IL17B|27190|interleukin 17B##BC113946|IL17B|27190|interleukin 17B##AF152098|IL17B|27190|interleukin 17B##AF184969|IL17B|27190|interleukin 17B##AF218727|IL17B|27190|interleukin 17B##AY358931|IL17B|27190|interleukin 17B##AF110385|IL17B|27190|interleukin 17B##AF212311|IL17B|27190|interleukin 17B##NM_014443|IL17B|27190|interleukin 17B##AK126481|MIR143HG|728264|MIR143 host gene (non-protein coding)##CR933654|MIR143HG|728264|MIR143 host gene (non-protein coding)##AF218004|CSNK1A1|1452|casein kinase 1, alpha 1##AK303794|CSNK1A1|1452|casein kinase 1, alpha 1##BC021971|CSNK1A1|1452|casein kinase 1, alpha 1##BC025371|CSNK1A1|1452|casein kinase 1, alpha 1##BC007246|CSNK1A1|1452|casein kinase 1, alpha 1	0.700015	CTCF.p2:11:0.700
chr13	39489694	39489802	reg1013376.p2	9.160	+	NM_207361	-228576	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	-565699	+	NM_016617 TSC_hg19_v1_chr13_+_38923946	-565797	+	DQ891676 EU176604 AK313632 BC025760 AK304159 NM_001144033 NM_145286	75178	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	122453	-	TSC_hg19_v1_chr13_-_39612251 NM_025138 NM_170719	122505	-	NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2##AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##DQ891676|STOML3|161003|stomatin (EPB72)-like 3##EU176604|STOML3|161003|stomatin (EPB72)-like 3##AK313632|STOML3|161003|stomatin (EPB72)-like 3##BC025760|STOML3|161003|stomatin (EPB72)-like 3##AK304159|STOML3|161003|stomatin (EPB72)-like 3##NM_001144033|STOML3|161003|stomatin (EPB72)-like 3##NM_145286|STOML3|161003|stomatin (EPB72)-like 3##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1##NM_025138|PROSER1|80209|proline and serine rich 1##NM_170719|PROSER1|80209|proline and serine rich 1	0.992746	CTCF.p2:19:0.993
chr3	146307838	146307947	reg1013359.p1	9.160	+	TSC_hg19_v1_chr3_-_146262505 AF098642 AB006746 NM_021105	-45368	-	TSC_hg19_v1_chr3_-_146262343 BC021100 BC032718 BC017901 AK313377 AK300181	-45523	-	TSC_hg19_v1_chr3_-_146262279 BC070251	-45600	-	BC157886 BC171917 TSC_hg19_v1_chr3_-_146323105	15175	-	AY436642 NM_001085420	16110	-	BC041954 TSC_hg19_v1_chr3_+_147111244	803340	+	AF098642|PLSCR1|5359|phospholipid scramblase 1##AB006746|PLSCR1|5359|phospholipid scramblase 1##NM_021105|PLSCR1|5359|phospholipid scramblase 1##BC021100|PLSCR1|5359|phospholipid scramblase 1##BC032718|PLSCR1|5359|phospholipid scramblase 1##BC017901|PLSCR1|5359|phospholipid scramblase 1##AK313377|PLSCR1|5359|phospholipid scramblase 1##AK300181|PLSCR1|5359|phospholipid scramblase 1##BC070251|PLSCR1|5359|phospholipid scramblase 1##BC157886|PLSCR5|389158|phospholipid scramblase family, member 5##BC171917|PLSCR5|389158|phospholipid scramblase family, member 5##AY436642|PLSCR5|389158|phospholipid scramblase family, member 5##NM_001085420|PLSCR5|389158|phospholipid scramblase family, member 5	0.99844	CTCF.p2:0:0.998
chr10	73246389	73246504	reg1012301.p1	9.159	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	-89708	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-167400	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-167421	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	233146	-	AK074172 NM_001168390	251134	-	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	286860	-	BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54	0.977064	CTCF.p2:-11:0.977
chr2	111513173	111513325	reg1013850.p1	9.159	+	AK300513 NM_001142807 BC022268	-23070	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-77427	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-77606	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	365238	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	1128377	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	1128512	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.013618	
chr2	242331635	242331765	reg1013681.p1	9.159	+	TSC_hg19_v1_chr2_+_242295703 NM_014808 AK300435 AB018336 BC021301	-36000	+	TSC_hg19_v1_chr2_+_242255366 AK294563	-76334	+	TSC_hg19_v1_chr2_+_242255355 D28540	-76345	+	BT019961 CU675833 CU677445 DQ893230 DQ896559 AB529004 D63780 X99325 TSC_hg19_v1_chr2_-_242447784 BC015793	115927	-	TSC_hg19_v1_chr2_-_242447969 AK092161 AK302751 AK297374 AK301214 AK291808 AK291947	116259	-	TSC_hg19_v1_chr2_-_242448000 BC091505 AK315966 BC007852 NM_006374	116331	-	NM_014808|FARP2|9855|FERM, RhoGEF and pleckstrin domain protein 2##AK300435|FARP2|9855|FERM, RhoGEF and pleckstrin domain protein 2##AB018336|FARP2|9855|FERM, RhoGEF and pleckstrin domain protein 2##BC021301|FARP2|9855|FERM, RhoGEF and pleckstrin domain protein 2##AK294563|SEPT2|4735|septin 2##D28540|SEPT2|4735|septin 2##BT019961|STK25|10494|serine/threonine kinase 25##DQ893230|STK25|10494|serine/threonine kinase 25##DQ896559|STK25|10494|serine/threonine kinase 25##D63780|STK25|10494|serine/threonine kinase 25##X99325|STK25|10494|serine/threonine kinase 25##BC015793|STK25|10494|serine/threonine kinase 25##AK092161|STK25|10494|serine/threonine kinase 25##AK302751|STK25|10494|serine/threonine kinase 25##AK297374|STK25|10494|serine/threonine kinase 25##AK301214|STK25|10494|serine/threonine kinase 25##AK291808|STK25|10494|serine/threonine kinase 25##AK291947|STK25|10494|serine/threonine kinase 25##BC091505|STK25|10494|serine/threonine kinase 25##AK315966|STK25|10494|serine/threonine kinase 25##BC007852|STK25|10494|serine/threonine kinase 25##NM_006374|STK25|10494|serine/threonine kinase 25	0.982482	CTCF.p2:5:0.982
chr7	86534659	86534772	reg1014649.p1	9.159	+	X77748 TSC_hg19_v1_chr7_+_86274130 DQ315361 DQ315362 DQ315363	-260599	+	AK294701 TSC_hg19_v1_chr7_+_86274004 BC022496	-260724	+	AK291406 TSC_hg19_v1_chr7_+_86273870	-260844	+	AK296250 NM_152748	60531	-	TSC_hg19_v1_chr7_-_86688965 NM_001142749	154263	-	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	246998	+	X77748|GRM3|2913|glutamate receptor, metabotropic 3##DQ315361|GRM3|2913|glutamate receptor, metabotropic 3##DQ315362|GRM3|2913|glutamate receptor, metabotropic 3##DQ315363|GRM3|2913|glutamate receptor, metabotropic 3##AK294701|GRM3|2913|glutamate receptor, metabotropic 3##BC022496|GRM3|2913|glutamate receptor, metabotropic 3##AK291406|GRM3|2913|glutamate receptor, metabotropic 3##AK296250|KIAA1324L|222223|KIAA1324-like##NM_152748|KIAA1324L|222223|KIAA1324-like##NM_001142749|KIAA1324L|222223|KIAA1324-like##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1	0.082002	
chr14	104145874	104145964	reg1012680.p1	9.158	+	TSC_hg19_v1_chr14_+_104095547 NM_001130107 NM_005552 NM_182923 AK294508 BC008881 L04733 AF527736 AY180164	-50268	+	TSC_hg19_v1_chr14_+_104029325 AK299527 NM_032374 AK223092 AK223103 BC007412	-116608	+	TSC_hg19_v1_chr14_-_104028984 AB020680 NM_001015048	-116858	-	AK124498 TSC_hg19_v1_chr14_-_104178577	32589	-	TSC_hg19_v1_chr14_-_104181759 AK022829 BC011725 BX161398 BC001036 AK023646 NM_001100118 NM_001100119 NM_005432	35864	-	TSC_hg19_v1_chr14_+_104182144 NM_001198953 NM_024071 BC005999 AK057816 BC001130 AY395756 AK290519 BX248261	36197	+	NM_001130107|KLC1|3831|kinesin light chain 1##NM_005552|KLC1|3831|kinesin light chain 1##NM_182923|KLC1|3831|kinesin light chain 1##AK294508|KLC1|3831|kinesin light chain 1##BC008881|KLC1|3831|kinesin light chain 1##L04733|KLC1|3831|kinesin light chain 1##AF527736|KLC1|3831|kinesin light chain 1##AY180164|KLC1|3831|kinesin light chain 1##NM_032374|APOPT1|84334|apoptogenic 1##AK223092|APOPT1|84334|apoptogenic 1##AK223103|APOPT1|84334|apoptogenic 1##BC007412|APOPT1|84334|apoptogenic 1##AB020680|BAG5|9529|BCL2-associated athanogene 5##NM_001015048|BAG5|9529|BCL2-associated athanogene 5##AK124498|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK022829|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC011725|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BX161398|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC001036|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK023646|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100118|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100119|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_005432|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001198953|ZFYVE21|79038|zinc finger, FYVE domain containing 21##NM_024071|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BC005999|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK057816|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BC001130|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AY395756|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK290519|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BX248261|ZFYVE21|79038|zinc finger, FYVE domain containing 21	0.470154	CTCF.p2:8:0.470
chr2	11828672	11828801	reg1014664.p1	9.158	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-18445	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-145893	+	TSC_hg19_v1_chr2_+_11682798 BC071853	-145935	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	58039	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	1028517	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	1029180	+	AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.971601	CTCF.p2:-11:0.972
chr3	172050418	172050557	reg1015786.p1	9.158	+	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-292150	+	TSC_hg19_v1_chr3_+_171757442 AY358367	-293029	+	TSC_hg19_v1_chr3_+_171757437 AK127826	-293053	+	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	115736	-	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	190691	-	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	378403	-	AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AY358367|FNDC3B|64778|fibronectin type III domain containing 3B##AK127826|FNDC3B|64778|fibronectin type III domain containing 3B##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1	0.999627	CTCF.p2:3:1.000
chr7	5527581	5527697	reg1000527.p4	9.158	+	NM_001080495	-64463	-	AY129022 TSC_hg19_v1_chr7_-_5461555	-66098	-	TSC_hg19_v1_chr7_-_5460842 BC140723	-66733	-	CU692902 TSC_hg19_v1_chr7_-_5553380 AK057042 BC006426 BC024256 NM_024963	25712	-	TSC_hg19_v1_chr7_-_5553435 AK130444 AK294949	25788	-	M28424 V00478 TSC_hg19_v1_chr7_-_5567980 HQ154074 DQ407611 EF036500	40373	-	NM_001080495|TNRC18|84629|trinucleotide repeat containing 18##AY129022|TNRC18|84629|trinucleotide repeat containing 18##AK057042|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC006426|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC024256|FBXL18|80028|F-box and leucine-rich repeat protein 18##NM_024963|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK130444|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK294949|FBXL18|80028|F-box and leucine-rich repeat protein 18##M28424|ACTB|60|actin, beta##V00478|ACTB|60|actin, beta##DQ407611|ACTB|60|actin, beta##EF036500|ACTB|60|actin, beta	0.023692	
chr9	43030432	43030548	reg1014296.p1	9.158	+	NM_001099279 NM_199244	-313257	+	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	-662132	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-1075576	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	102997	-	NM_001145196	600239	-	TSC_hg19_v1_chr9_+_43684876 NM_001201380	654353	+	NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B	1.419076	CTCF.p2:-2:0.981	CTCF.p2:51:0.438
chr1	14137835	14137922	reg1010833.p1	9.157	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-61937	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-61955	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-61993	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	787316	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	1112841	+	AY505121 NM_001018001	1118417	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.97729	CTCF.p2:6:0.977
chr11	61406020	61406119	reg1011329.p1	9.157	+	TSC_hg19_v1_chr11_-_61348549 BC125170 BC125171 NM_001252065 NM_004200	-57542	-	NM_001145077	-129798	+	NM_001170753 NM_145017 TSC_hg19_v1_chr11_+_61248591 AK057333 BC043246 JF442033	-157451	+	TSC_hg19_v1_chr11_+_61447896 BC150176 BC150195 NM_006133 AB014559 BC152453	41812	+	TSC_hg19_v1_chr11_+_61520107 AB023171 NM_001127392 AB385408	114038	+	AF086762 NM_013279	116791	+	BC125170|SYT7|9066|synaptotagmin VII##BC125171|SYT7|9066|synaptotagmin VII##NM_001252065|SYT7|9066|synaptotagmin VII##NM_004200|SYT7|9066|synaptotagmin VII##NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B##NM_001170753|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##NM_145017|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##AK057333|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##BC043246|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##JF442033|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##BC150176|DAGLA|747|diacylglycerol lipase, alpha##BC150195|DAGLA|747|diacylglycerol lipase, alpha##NM_006133|DAGLA|747|diacylglycerol lipase, alpha##AB014559|DAGLA|747|diacylglycerol lipase, alpha##BC152453|DAGLA|747|diacylglycerol lipase, alpha##AB023171|C11orf9|745|chromosome 11 open reading frame 9##NM_001127392|C11orf9|745|chromosome 11 open reading frame 9##AF086762|C11orf9|745|chromosome 11 open reading frame 9##NM_013279|C11orf9|745|chromosome 11 open reading frame 9	0.306718	CTCF.p2:4:0.307
chr2	73917945	73918050	reg1013910.p1	9.157	+	AB019551 BC012626 AF187813 NM_003960	-48483	-	TSC_hg19_v1_chr2_+_73613119 AJ417593 AX751581 NM_015120	-304939	+	AB463596 BC136252 BC143379 X60104 BC034462 TSC_hg19_v1_chr2_-_73520677 NM_001965 AK314154	-397357	-	AF185571 BC069564 BC121101 BC121102 NM_016347	10469	-	TSC_hg19_v1_chr2_-_73964473 AK291071 AF060921 AK097254 AY643713 BC029492 AK295239 AF151879 NM_016058	46474	-	CU674166 DQ891356 DQ894537 TSC_hg19_v1_chr2_-_74007231 BC000346 AF023917 AK315271 CR627368 NM_003584	89196	-	AB019551|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##BC012626|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##AF187813|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##NM_003960|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##AJ417593|ALMS1|7840|Alstrom syndrome 1##AX751581|ALMS1|7840|Alstrom syndrome 1##NM_015120|ALMS1|7840|Alstrom syndrome 1##BC136252|EGR4|1961|early growth response 4##BC143379|EGR4|1961|early growth response 4##X60104|EGR4|1961|early growth response 4##BC034462|EGR4|1961|early growth response 4##NM_001965|EGR4|1961|early growth response 4##AK314154|EGR4|1961|early growth response 4##AF185571|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC069564|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC121101|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC121102|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##NM_016347|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##AK291071|TPRKB|51002|TP53RK binding protein##AF060921|TPRKB|51002|TP53RK binding protein##AK097254|TPRKB|51002|TP53RK binding protein##AY643713|TPRKB|51002|TP53RK binding protein##BC029492|TPRKB|51002|TP53RK binding protein##AK295239|TPRKB|51002|TP53RK binding protein##AF151879|TPRKB|51002|TP53RK binding protein##NM_016058|TPRKB|51002|TP53RK binding protein##DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	0.9541	CTCF.p2:7:0.954
chr6	593290	593388	reg1010854.p1	9.157	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-201575	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-300842	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-301254	+	AF508547 BC101697 BC101699 NM_148959	63614	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	99751	-	BC053850 NM_033260	719335	+	NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1	0.999039	CTCF.p2:-10:0.999
chr10	37169954	37170065	reg1013949.p1	9.156	+	AB587328 AB043703 NM_031866	-1239650	-	AK074504 NM_153368	-1275672	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	-1544215	+	AF269087 NM_052997	244775	+	NM_001190489	721849	-	BC132915 BC132917 BC110869 BC021819 AJ491695 AJ492196 NM_021045 TSC_hg19_v1_chr10_-_38146539	976409	-	AB043703|FZD8|8325|frizzled family receptor 8##NM_031866|FZD8|8325|frizzled family receptor 8##AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AF269087|ANKRD30A|91074|ankyrin repeat domain 30A##NM_052997|ANKRD30A|91074|ankyrin repeat domain 30A##NM_001190489|MTRNR2L7|100288485|MT-RNR2-like 7##BC132915|ZNF248|57209|zinc finger protein 248##BC132917|ZNF248|57209|zinc finger protein 248##BC110869|ZNF248|57209|zinc finger protein 248##BC021819|ZNF248|57209|zinc finger protein 248##AJ491695|ZNF248|57209|zinc finger protein 248##AJ492196|ZNF248|57209|zinc finger protein 248##NM_021045|ZNF248|57209|zinc finger protein 248	0.020875	
chr19	3473146	3473256	reg1012997.p2	9.156	+	CU680225 TSC_hg19_v1_chr19_-_3462913	-10362	-	TSC_hg19_v1_chr19_+_3366607 X92857 AB590220 CU680224 DQ893655 DQ895795	-106586	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	-106621	+	TSC_hg19_v1_chr19_-_3480524 BC146979 BC146984 NM_001136503	7325	-	BC002817 NM_031304 TSC_hg19_v1_chr19_-_3500673	27448	-	NM_001145165	27736	-	X92857|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ893655|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ895795|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC146979|C19orf77|284422|chromosome 19 open reading frame 77##BC146984|C19orf77|284422|chromosome 19 open reading frame 77##NM_001136503|C19orf77|284422|chromosome 19 open reading frame 77##BC002817|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase##NM_031304|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase##NM_001145165|DOHH|83475|deoxyhypusine hydroxylase/monooxygenase	0.835086	CTCF.p2:-13:0.821
chr5	53513801	53513923	reg1012173.p1	9.156	+	TSC_hg19_v1_chr5_+_52856474 AF020351 AK307973 CU675075	-657376	+	TSC_hg19_v1_chr5_+_52856468 NM_002495 BC005270	-657398	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	-737312	+	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	92463	-	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	92540	-	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	237662	+	AF020351|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK307973|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##NM_002495|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##BC005270|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3	0.921004	CTCF.p2:31:0.921
chr7	142377267	142377397	reg1012225.p1	9.156	+	NM_001190487	-3202	+	AY358487 BC035384 AK122940 NM_001001317	-419471	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-565793	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	79994	+	M12426 TSC_hg19_v1_chr7_+_142495248	117863	+	TSC_hg19_v1_chr7_+_142552837 NM_004445 D83492 BC015495 BC051028 BC056159	175393	+	NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)##NM_004445|EPHB6|2051|EPH receptor B6##D83492|EPHB6|2051|EPH receptor B6##BC015495|EPHB6|2051|EPH receptor B6##BC051028|EPHB6|2051|EPH receptor B6##BC056159|EPHB6|2051|EPH receptor B6	0.994237	CTCF.p2:6:0.994
chr12	56053715	56053828	reg1014133.p1	9.155	+	BC136914 AB529283 NM_206899	-23112	+	BC137000 BC137001 NM_001005494	-108775	+	NM_001005519	-167610	+	AK290112 NM_152637 TSC_hg19_v1_chr12_+_56075356	21572	+	BC020509 TSC_hg19_v1_chr12_+_56075425 AY358508	21668	+	AF052050 AF072132 AY358882 TSC_hg19_v1_chr12_-_56101636 AF032108 AB210036	47789	-	BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1##NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1##BC137000|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##BC137001|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##NM_001005494|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68##AK290112|METTL7B|196410|methyltransferase like 7B##NM_152637|METTL7B|196410|methyltransferase like 7B##BC020509|METTL7B|196410|methyltransferase like 7B##AY358508|METTL7B|196410|methyltransferase like 7B##AF052050|ITGA7|3679|integrin, alpha 7##AF072132|ITGA7|3679|integrin, alpha 7##AY358882|ITGA7|3679|integrin, alpha 7##AF032108|ITGA7|3679|integrin, alpha 7##AB210036|ITGA7|3679|integrin, alpha 7	0.886908	CTCF.p2:-16:0.887
chr2	16079915	16080069	reg1016293.p1	9.155	+	TSC_hg19_v1_chr2_+_15732004 AB593034 AB593033 AB593031 AK297432 AK298426 BC053673 BC012132 AB593032 AK298212 BC012739 AK313933 EF418570 EF418571 AB527788	-347967	+	NM_004939 X70649	-348223	+	TSC_hg19_v1_chr2_-_15701451 BC108693 AF388385 BC131735 NM_015909 AB621813	-378534	-	M55330 TSC_hg19_v1_chr2_+_16080569	572	+	TSC_hg19_v1_chr2_+_16080676 AK298225 NM_005378 AF320053 AK299495	696	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	1781	-	AB593034|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593033|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593031|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK297432|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK298426|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC053673|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC012132|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593032|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK298212|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC012739|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK313933|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##EF418570|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##EF418571|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##NM_004939|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##X70649|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC108693|NBAS|51594|neuroblastoma amplified sequence##AF388385|NBAS|51594|neuroblastoma amplified sequence##BC131735|NBAS|51594|neuroblastoma amplified sequence##NM_015909|NBAS|51594|neuroblastoma amplified sequence##AB621813|NBAS|51594|neuroblastoma amplified sequence##M55330|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##AK298225|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##NM_005378|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##AF320053|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##AK299495|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)	0.0	
chr4	108834582	108834692	reg1013761.p1	9.155	+	NM_001136257 NM_152621 BC028705 AK314049 BC041369	-20213	+	AK290344 NM_001136258 AF452717	-88870	+	BC011392 AF016496 CR457028 CU690750 BC040940 TSC_hg19_v1_chr4_-_108641372 BC050627 AF033026 AK292774 AK297981 Y10387 BC032513 AF105227 NM_005443	-193273	-	TSC_hg19_v1_chr4_+_108852714 AK304724 AK290002 NM_183075 BC012027 BC132767 BC136483 BC144148 AY343323 AK303284 HQ258621	18096	+	AF001903 NM_001184705 NM_005327 TSC_hg19_v1_chr4_+_108910984 X96752	76299	+	AK314444 TSC_hg19_v1_chr4_+_108911011	76375	+	NM_001136257|SGMS2|166929|sphingomyelin synthase 2##NM_152621|SGMS2|166929|sphingomyelin synthase 2##BC028705|SGMS2|166929|sphingomyelin synthase 2##AK314049|SGMS2|166929|sphingomyelin synthase 2##BC041369|SGMS2|166929|sphingomyelin synthase 2##AK290344|SGMS2|166929|sphingomyelin synthase 2##NM_001136258|SGMS2|166929|sphingomyelin synthase 2##AF452717|SGMS2|166929|sphingomyelin synthase 2##BC011392|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF016496|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##CR457028|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC040940|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC050627|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF033026|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK292774|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK297981|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##Y10387|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC032513|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF105227|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##NM_005443|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK304724|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##AK290002|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##NM_183075|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##BC012027|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##BC132767|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##BC136483|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##BC144148|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##AY343323|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##AK303284|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##HQ258621|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##AF001903|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_001184705|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_005327|HADH|3033|hydroxyacyl-CoA dehydrogenase##X96752|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK314444|HADH|3033|hydroxyacyl-CoA dehydrogenase	0.999638	CTCF.p2:11:1.000
chr8	131027535	131027674	reg1014430.p1	9.155	+	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	-75598	-	BC003599 TSC_hg19_v1_chr8_-_130951934	-75689	-	AB042405 NM_031415	-228471	-	BC016345 TSC_hg19_v1_chr8_-_131028667	1055	-	TSC_hg19_v1_chr8_-_131028699 AK002059	1090	-	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	1279	-	BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B##BC003599|FAM49B|51571|family with sequence similarity 49, member B##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC016345|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B	0.994572	CTCF.p2:-1:0.995
chr1	113008863	113009004	reg1012464.p1	9.154	+	TSC_hg19_v1_chr1_+_112938871 BC016029 AK022544 AK092791 AX747733	-70065	+	NM_018704 TSC_hg19_v1_chr1_+_112938844 AK023340	-70107	+	AY863198 AF120491 NM_004980 NM_172198	-477211	-	AB045116 NM_004185	1106	+	BC141825 NM_024494	42436	+	TSC_hg19_v1_chr1_+_113161808 BX648738	152860	+	BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK092791|LOC100129406|100129406|uncharacterized LOC100129406##NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AF120491|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_004980|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_172198|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##AB045116|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_004185|WNT2B|7482|wingless-type MMTV integration site family, member 2B##BC141825|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_024494|WNT2B|7482|wingless-type MMTV integration site family, member 2B##BX648738|CAPZA1|829|capping protein (actin filament) muscle Z-line, alpha 1	0.94688	CTCF.p2:0:0.947
chr18	39854557	39854658	reg1010491.p1	9.154	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-319374	+	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	-319408	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-2474339	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	840962	-	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	1002822	-	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	2405507	+	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK090603|LOC647946|647946|uncharacterized LOC647946##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1	0.952502	CTCF.p2:4:0.953
chr3	137665329	137665477	reg1013373.p1	9.154	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	-182256	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-988573	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-1016066	+	AK098474 NM_001002026 AF349452	52276	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	63600	+	AK057406 NM_001170538	166918	-	NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18##AK057406|DZIP1L|199221|DAZ interacting protein 1-like##NM_001170538|DZIP1L|199221|DAZ interacting protein 1-like	0.999888	CTCF.p2:4:1.000
chr1	202243870	202244002	reg1015697.p1	9.153	+	AF190501 NM_001017404	-60654	+	AY358119 BC038795 NM_021636 BC047905	-71044	+	NM_001017403 AB049405	-80762	+	AK000504 AF160215 BC004152 BC019284 TSC_hg19_v1_chr1_-_202311065	67120	-	TSC_hg19_v1_chr1_-_202311082 AF161499 NM_014176	67150	-	TSC_hg19_v1_chr1_+_202317826 AK307591 NM_001167857 NM_001167858 NM_002481 AB003062 AF324888 BC144699 BC110907 BC034430 BC071166	73937	+	AF190501|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_001017404|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AY358119|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC038795|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_021636|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC047905|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_001017403|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AB049405|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AK000504|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AF160215|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##BC004152|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##BC019284|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AF161499|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##NM_014176|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AK307591|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167857|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167858|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_002481|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB003062|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AF324888|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC144699|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC110907|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC034430|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC071166|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B	0.999788	CTCF.p2:2:1.000
chr14	69574240	69574375	reg1015696.p1	9.153	+	TSC_hg19_v1_chr14_-_69446038 NM_001102 NM_001130004 NM_001130005	-128244	-	TSC_hg19_v1_chr14_-_69446010 BC003576	-128298	-	TSC_hg19_v1_chr14_-_69445990 BC004984	-128315	-	TSC_hg19_v1_chr14_-_69619315 AL831932	45035	-	TSC_hg19_v1_chr14_-_69619740 AB463347 CU692762 BC022967 BX648006 AB058727	45368	-	TSC_hg19_v1_chr14_-_69619843 BC136632	45537	-	NM_001102|ACTN1|87|actinin, alpha 1##NM_001130004|ACTN1|87|actinin, alpha 1##NM_001130005|ACTN1|87|actinin, alpha 1##BC003576|ACTN1|87|actinin, alpha 1##BC004984|ACTN1|87|actinin, alpha 1##AL831932|DCAF5|8816|DDB1 and CUL4 associated factor 5##BC022967|DCAF5|8816|DDB1 and CUL4 associated factor 5##BX648006|DCAF5|8816|DDB1 and CUL4 associated factor 5##AB058727|DCAF5|8816|DDB1 and CUL4 associated factor 5##BC136632|DCAF5|8816|DDB1 and CUL4 associated factor 5	1.076965	CTCF.p2:4:0.911
chr4	79873160	79873275	reg1013796.p1	9.153	+	AK055774 BX648346 CU689134 AY424281 BC029604 TSC_hg19_v1_chr4_-_79860593 BC031256 BC047510 AK291232 NM_001040202 AX775925	-12735	-	TSC_hg19_v1_chr4_+_79697552 AK292147 BC036021 DQ890994	-175594	+	NM_017593 NM_198892 TSC_hg19_v1_chr4_+_79697532	-175681	+	BC063623 BC080651 BC004552 NM_032693	373944	-	CU688758 DQ891321 DQ894505 BC058888 AK312768 BC029820 BC048274 X78712 NM_033214 AK292241 BC027598	456150	-	AB527650 AY233452 TSC_hg19_v1_chr4_-_80993874 AY040326 BC114374 AB209913	1120671	-	AK055774|PAQR3|152559|progestin and adipoQ receptor family member III##BX648346|PAQR3|152559|progestin and adipoQ receptor family member III##AY424281|PAQR3|152559|progestin and adipoQ receptor family member III##BC029604|PAQR3|152559|progestin and adipoQ receptor family member III##BC031256|PAQR3|152559|progestin and adipoQ receptor family member III##BC047510|PAQR3|152559|progestin and adipoQ receptor family member III##AK291232|PAQR3|152559|progestin and adipoQ receptor family member III##NM_001040202|PAQR3|152559|progestin and adipoQ receptor family member III##AX775925|PAQR3|152559|progestin and adipoQ receptor family member III##AK292147|BMP2K|55589|BMP2 inducible kinase##BC036021|BMP2K|55589|BMP2 inducible kinase##DQ890994|BMP2K|55589|BMP2 inducible kinase##NM_017593|BMP2K|55589|BMP2 inducible kinase##NM_198892|BMP2K|55589|BMP2 inducible kinase##BC063623|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC080651|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC004552|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##NM_032693|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##DQ891321|GK2|2712|glycerol kinase 2##DQ894505|GK2|2712|glycerol kinase 2##BC058888|GK2|2712|glycerol kinase 2##BC029820|GK2|2712|glycerol kinase 2##BC048274|GK2|2712|glycerol kinase 2##X78712|GK2|2712|glycerol kinase 2##NM_033214|GK2|2712|glycerol kinase 2##AK292241|GK2|2712|glycerol kinase 2##BC027598|GK2|2712|glycerol kinase 2##AY233452|ANTXR2|118429|anthrax toxin receptor 2##AY040326|ANTXR2|118429|anthrax toxin receptor 2##BC114374|ANTXR2|118429|anthrax toxin receptor 2##AB209913|ANTXR2|118429|anthrax toxin receptor 2	0.983299	CTCF.p2:-4:0.983
chr6	169357126	169357257	reg1012863.p1	9.153	+	TSC_hg19_v1_chr6_+_168841879 AK056700 AL832303 AB014730 AB014737	-515240	+	TSC_hg19_v1_chr6_+_168841866 BC047583 AJ420521 AK314613	-515329	+	TSC_hg19_v1_chr6_+_168841832 BC028420 NM_001166412 NM_022138	-515356	+	TSC_hg19_v1_chr6_-_169650910 AB384955	293711	-	BC146676 BC150175 TSC_hg19_v1_chr6_-_169653942	296742	-	TSC_hg19_v1_chr6_-_169654117 L12350 NM_003247 AK292429	296923	-	AK056700|SMOC2|64094|SPARC related modular calcium binding 2##AL832303|SMOC2|64094|SPARC related modular calcium binding 2##AB014730|SMOC2|64094|SPARC related modular calcium binding 2##AB014737|SMOC2|64094|SPARC related modular calcium binding 2##BC047583|SMOC2|64094|SPARC related modular calcium binding 2##AJ420521|SMOC2|64094|SPARC related modular calcium binding 2##AK314613|SMOC2|64094|SPARC related modular calcium binding 2##BC028420|SMOC2|64094|SPARC related modular calcium binding 2##NM_001166412|SMOC2|64094|SPARC related modular calcium binding 2##NM_022138|SMOC2|64094|SPARC related modular calcium binding 2##BC146676|THBS2|7058|thrombospondin 2##BC150175|THBS2|7058|thrombospondin 2##L12350|THBS2|7058|thrombospondin 2##NM_003247|THBS2|7058|thrombospondin 2##AK292429|THBS2|7058|thrombospondin 2	0.687075	CTCF.p2:-20:0.687
chr11	100801009	100801180	reg1013104.p2	9.152	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	-242966	+	AB013802 AB013803 NM_175566	-1374221	+	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	-1909345	+	AK314174 AF247167 NM_032021	61670	+	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	198705	-	AK304853 TSC_hg19_v1_chr11_-_101000531 NM_000926	199409	-	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor##AK304853|PGR|5241|progesterone receptor##NM_000926|PGR|5241|progesterone receptor	0.996264	CTCF.p2:12:0.996
chr20	23226391	23226536	reg1016300.p1	9.152	+	AB527124 AM393282 AM393752 DQ891055 DQ894234 TSC_hg19_v1_chr20_-_23066962 AJ295142 AB209895 BC028075 AK299957 NM_012072 U94333	-159530	-	TSC_hg19_v1_chr20_-_23062805 AK056764	-163651	-	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	-196225	-	BC003410 NM_013248 TSC_hg19_v1_chr20_+_23331435 AK026360 BC000759 BC003029 AF156957 BC002687	104981	+	AK295362 TSC_hg19_v1_chr20_+_23342818 AK056477 AK293942 AK314599	116350	+	TSC_hg19_v1_chr20_+_23342853 AK289814	116396	+	AM393282|CD93|22918|CD93 molecule##AM393752|CD93|22918|CD93 molecule##DQ891055|CD93|22918|CD93 molecule##DQ894234|CD93|22918|CD93 molecule##AJ295142|CD93|22918|CD93 molecule##AB209895|CD93|22918|CD93 molecule##BC028075|CD93|22918|CD93 molecule##AK299957|CD93|22918|CD93 molecule##NM_012072|CD93|22918|CD93 molecule##U94333|CD93|22918|CD93 molecule##AK056764|CD93|22918|CD93 molecule##BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##BC003410|NXT1|29107|NTF2-like export factor 1##NM_013248|NXT1|29107|NTF2-like export factor 1##AK026360|NXT1|29107|NTF2-like export factor 1##BC000759|NXT1|29107|NTF2-like export factor 1##BC003029|NXT1|29107|NTF2-like export factor 1##AF156957|NXT1|29107|NTF2-like export factor 1##BC002687|NXT1|29107|NTF2-like export factor 1##AK295362|GZF1|64412|GDNF-inducible zinc finger protein 1##AK056477|GZF1|64412|GDNF-inducible zinc finger protein 1##AK293942|GZF1|64412|GDNF-inducible zinc finger protein 1##AK314599|GZF1|64412|GDNF-inducible zinc finger protein 1##AK289814|GZF1|64412|GDNF-inducible zinc finger protein 1	0.626985	CTCF.p2:3:0.627
chr20	37380110	37380257	reg1015585.p1	9.152	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	-3071	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-27024	+	NM_080552 TSC_hg19_v1_chr20_+_37353115	-27071	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	54171	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	174806	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	174885	+	BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##NM_080552|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D	0.934906	CTCF.p2:-5:0.935
chr2	206640921	206641047	reg1012949.p2	9.152	+	TSC_hg19_v1_chr2_+_206547371 AK290934	-93623	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	-93806	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-1230265	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	309927	-	AK295987 NM_001199984	382933	-	X61100 AK098395 BC018900 BC022368 TSC_hg19_v1_chr2_-_207024145 AK300585 BC030833 AK295705 AK295966 AK298320 BC004133 NM_001199981 NM_001199982 NM_001199983 NM_005006	383188	-	AK290934|NRP2|8828|neuropilin 2##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D##AK295987|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199984|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	0.999397	CTCF.p2:-15:0.999
chr7	113722097	113722213	reg1012544.p1	9.152	+	X78578 AF024579 HQ258594 BC070313 BC056666 NM_002711 BC126451 BC126453	-163072	-	TSC_hg19_v1_chr7_-_112758613 BC107860	-963526	-	TSC_hg19_v1_chr7_-_112758606 BC065765 BX537645	-963549	-	TSC_hg19_v1_chr7_+_113726381 AK131266	4266	+	TSC_hg19_v1_chr7_+_113726514 AF454830	4348	+	TSC_hg19_v1_chr7_+_113726599 CR749236	4448	+	X78578|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AF024579|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##HQ258594|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC070313|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC056666|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##NM_002711|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126451|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126453|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC107860|LOC401397|401397|uncharacterized LOC401397##BC065765|LOC401397|401397|uncharacterized LOC401397##BX537645|LOC401397|401397|uncharacterized LOC401397##AK131266|FOXP2|93986|forkhead box P2##AF454830|FOXP2|93986|forkhead box P2##CR749236|FOXP2|93986|forkhead box P2	0.0	
chr8	11137134	11137270	reg1013096.p2	9.152	+	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	-78337	-	TSC_hg19_v1_chr8_-_10697386 AF205718 AF418553 AJ344104	-439793	-	AY238941 AY523566 BC093762 BC143382 NM_017884 TSC_hg19_v1_chr8_-_10697379 AY029161 AK313715 BC015479 AK296724	-439868	-	TSC_hg19_v1_chr8_+_11141999 BC034990 NM_015458	4810	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	5153	+	AJ291677 NM_054028 BC131696	51308	+	AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AF205718|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF418553|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ344104|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY238941|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY523566|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC093762|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC143382|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##NM_017884|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AK313715|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC015479|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC034990|MTMR9|66036|myotubularin related protein 9##NM_015458|MTMR9|66036|myotubularin related protein 9##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9##AJ291677|SLC35G5|83650|solute carrier family 35, member G5##NM_054028|SLC35G5|83650|solute carrier family 35, member G5##BC131696|SLC35G5|83650|solute carrier family 35, member G5	0.984765	CTCF.p2:-1:0.985
chr4	113020981	113021121	reg1008857.p1	9.151	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1457773	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1462882	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-1476776	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	45563	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	132033	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	185950	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.987587	CTCF.p2:-30:0.988
chr6	71900633	71900770	reg1014981.p1	9.151	+	AB075843 NM_080742	-233938	-	TSC_hg19_v1_chr6_+_71377620 AK315579 BC028074 BC008672 AK303387 BC036123 AK023221 AY055003 AY055004 AK222711 AK290448 CU688386	-523046	+	TSC_hg19_v1_chr6_+_71377511 NM_001044305 NM_021940 AF442495	-523178	+	NM_024576 TSC_hg19_v1_chr6_+_71998479	97785	+	TSC_hg19_v1_chr6_+_71998513 BC018688	97809	+	TSC_hg19_v1_chr6_+_71998514 BC110999	97823	+	AB075843|B3GAT2|135152|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)##NM_080742|B3GAT2|135152|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)##AK315579|SMAP1|60682|small ArfGAP 1##BC028074|SMAP1|60682|small ArfGAP 1##BC008672|SMAP1|60682|small ArfGAP 1##AK303387|SMAP1|60682|small ArfGAP 1##BC036123|SMAP1|60682|small ArfGAP 1##AK023221|SMAP1|60682|small ArfGAP 1##AY055003|SMAP1|60682|small ArfGAP 1##AY055004|SMAP1|60682|small ArfGAP 1##AK222711|SMAP1|60682|small ArfGAP 1##AK290448|SMAP1|60682|small ArfGAP 1##NM_001044305|SMAP1|60682|small ArfGAP 1##NM_021940|SMAP1|60682|small ArfGAP 1##AF442495|SMAP1|60682|small ArfGAP 1##NM_024576|OGFRL1|79627|opioid growth factor receptor-like 1##BC018688|OGFRL1|79627|opioid growth factor receptor-like 1##BC110999|OGFRL1|79627|opioid growth factor receptor-like 1	0.928581	CTCF.p2:0:0.929
chr7	32519341	32519443	reg1013851.p1	9.151	+	NM_001191058	-181010	-	AK094180 NM_001191059 U40371 NM_005020	-408381	-	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	-408887	-	TSC_hg19_v1_chr7_-_32529998 AJ238097 AF182291 CU675199 AB463843 BC005938 AK022772 AK024217 NM_012322	10605	-	NM_001130710 NM_001139499	15477	-	TSC_hg19_v1_chr7_+_32535132 AL833560	15703	+	NM_001191058|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AJ238097|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182291|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC005938|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK022772|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK024217|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012322|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001130710|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001139499|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AL833560|AVL9|23080|AVL9 homolog (S. cerevisiase)	0.794276	CTCF.p2:1:0.794
chr8	67341128	67341267	reg1015822.p1	9.151	+	BC002599 BC011031 AK075431 NM_000756	-250430	-	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	-301857	+	NM_033105 BC016742 AF368276 AL133660	-407378	+	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	109	+	NM_144650 AY033237 AK056992 AK300881 BC047492 BC064634 AK293530 AK300243 AK294114 BC110290	3535	+	NM_152765	64293	+	BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone##AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_144650|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AY033237|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK056992|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300881|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC047492|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC064634|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK293530|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300243|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK294114|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC110290|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##NM_152765|C8orf46|254778|chromosome 8 open reading frame 46	0.995168	CTCF.p2:-13:0.995
chr9	79765790	79765937	reg1016549.p1	9.151	+	NM_001013735	-131293	+	AB535152 FJ808772 FJ808773 BC019095 NM_015225 TSC_hg19_v1_chr9_-_79521026	-244911	-	AY196297 NM_001097636	-650315	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	26476	+	TSC_hg19_v1_chr9_+_79792474 AB054005	26645	+	AK027023 TSC_hg19_v1_chr9_+_79968352	202485	+	NM_001013735|FOXB2|442425|forkhead box B2##AB535152|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808772|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808773|PRUNE2|158471|prune homolog 2 (Drosophila)##BC019095|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_015225|PRUNE2|158471|prune homolog 2 (Drosophila)##AY196297|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097636|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)	0.999659	CTCF.p2:4:1.000
chr6	106894274	106894423	reg1014576.p1	9.150	+	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	-120685	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	-120816	-	BC002699 TSC_hg19_v1_chr6_-_106773313	-121040	-	AK056705 NM_001624	65381	+	TSC_hg19_v1_chr6_+_106960443 U83115	66063	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	182932	-	CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK056705|AIM1|202|absent in melanoma 1##NM_001624|AIM1|202|absent in melanoma 1##U83115|AIM1|202|absent in melanoma 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1	0.746947	CTCF.p2:0:0.747
chr8	110564336	110564436	reg1013010.p2	9.150	+	NM_004215 BC005249 BC022506 AK308950 AB007619 AF006265 AY515724	-11976	+	TSC_hg19_v1_chr8_+_110551942 NM_198120 AK290651 BC017729	-12401	+	AY219181 NM_177531 BC093096 AK128617	-189657	+	AK297182 TSC_hg19_v1_chr8_-_110620232	55840	-	NM_001099756	91032	-	AY705385 AB384607 TSC_hg19_v1_chr8_-_110656972	92543	-	NM_004215|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC005249|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC022506|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK308950|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AB007619|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AF006265|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AY515724|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##NM_198120|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK290651|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC017729|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AY219181|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##NM_177531|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##BC093096|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##AK297182|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099756|SYBU|55638|syntabulin (syntaxin-interacting)##AY705385|SYBU|55638|syntabulin (syntaxin-interacting)	0.0	
chr8	27373506	27373629	reg1016212.p1	9.149	+	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	-24909	+	AK314787 U62431 NM_000742	-36796	-	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-190490	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	98638	-	AB527877 TSC_hg19_v1_chr8_-_27472317 NM_001831	98745	-	BC060811 TSC_hg19_v1_chr8_+_27491395	117822	+	AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin##NM_001831|CLU|1191|clusterin##BC060811|SCARA3|51435|scavenger receptor class A, member 3	0.874693	CTCF.p2:-4:0.875
chr10	102772707	102772864	reg1013773.p1	9.148	+	BC058938 TSC_hg19_v1_chr10_+_102759622	-13139	+	AB058716 TSC_hg19_v1_chr10_+_102759264	-13537	+	TSC_hg19_v1_chr10_+_102758072 AK298208	-14679	+	TSC_hg19_v1_chr10_-_102790862 AK024422	18073	-	FJ617449 TSC_hg19_v1_chr10_-_102790906 AK026862 AK225136 NM_001195263 NM_024895	18112	-	TSC_hg19_v1_chr10_+_102790985 NM_030971	18204	+	BC058938|LZTS2|84445|leucine zipper, putative tumor suppressor 2##AB058716|LZTS2|84445|leucine zipper, putative tumor suppressor 2##AK298208|LZTS2|84445|leucine zipper, putative tumor suppressor 2##AK024422|PDZD7|79955|PDZ domain containing 7##FJ617449|PDZD7|79955|PDZ domain containing 7##AK026862|PDZD7|79955|PDZ domain containing 7##AK225136|PDZD7|79955|PDZ domain containing 7##NM_001195263|PDZD7|79955|PDZ domain containing 7##NM_024895|PDZD7|79955|PDZ domain containing 7##NM_030971|SFXN3|81855|sideroflexin 3	0.976149	CTCF.p2:-27:0.976
chr22	23090883	23091011	reg1013347.p2	9.148	+	TSC_hg19_v1_chr22_+_23063107 M18645 X53070 BC073786 X57805 X57813 AF026926 L35916 L35917 L35918 L35920 U43769 X64165 X64166 X54442	-27816	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	-36065	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	-50429	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	44159	+	TSC_hg19_v1_chr22_+_23154240 L29158 L29159 L29160 L29161 L29164 BC032452 BC089414 AY190827 X57810 L26902	63328	+	X62125 TSC_hg19_v1_chr22_+_23165276 AK129603 BC071804 BC033102 CU689610 L03633 HM996064 HM996172 AF124174 AF194540 AF194541 AF194542 AF194543 AF194544 AF194545 AF194546 AF194547 AF194548 AF194549 AF194550 AF194551 AF194552 AF194553 AF194554 AF194555 AF194556 AF194557 AF194558 AF194559 AF194560 AF194561 AF194562 AF194563 AF194564 AF194565 AF194566 AF194567 AF194568 AF194569 AF194570 AF194571 AF194572 AF194573 AF194574 AF194575 AF194576 AF194577 AJ388658 AJ697911 AM181371 AM183998 AM184000 AM184018 AY685383 AY942038 DQ098709 DQ098711 DQ098766 DQ098772 DQ098775 DQ098778 DQ098782 DQ322816 DQ322984 DQ322992 EF589387 EF589498 EF589544 GU086862 L26532 Y09387 AM184068 DQ098712 DQ098779 AJ399866 AY050712 DQ322899 DQ322900 DQ322979 L21956 S67988 AY950800 U09888 U09892 Y08149 AF103683 AF044486 AY962389 AF092503 AJ408283 DQ098753 Z46858 DQ098738 DQ098739 DQ098762 L38428 DQ098710 AF103704 AF103701 AF103718 AF490954 AF490947 AF103709 AF103640 AF103644 AF103645 AF103647 AF103697 AF103698 AF103700 U87151	74448	+	L35918|IGLJ3|28831|immunoglobulin lambda joining 3##BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3##DQ896079|IGL@|3535|immunoglobulin lambda locus	0.436956	CTCF.p2:3:0.437
chr6	139013458	139013599	reg1013922.p2	9.148	+	TSC_hg19_v1_chr6_-_138893682 NM_020464	-119820	-	TSC_hg19_v1_chr6_-_138820580 AK092744 AX747703	-192912	-	AK307584 NM_001144060 TSC_hg19_v1_chr6_-_138820579	-192950	-	TSC_hg19_v1_chr6_+_139013613 AK128874	85	+	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	81262	+	AK092592 AX747618 NM_001242740	81273	-	NM_020464|NHSL1|57224|NHS-like 1##AK307584|NHSL1|57224|NHS-like 1##NM_001144060|NHSL1|57224|NHS-like 1##AK128874|FLJ46906|441172|uncharacterized LOC441172##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A##AK092592|LOC100507462|100507462|uncharacterized LOC100507462##NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462	0.966933	CTCF.p2:12:0.967
chr12	26170657	26170810	reg1015945.p1	9.147	+	AK290055 NM_001164747	-44046	+	TSC_hg19_v1_chr12_+_26111964 NM_001164748 NM_007211 BC030021 AB093206 AY665468 AY665469 AY665470 AY665471	-58732	+	AK296816 NM_001145727	-369246	-	NM_001164746 AK292333	34760	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	107188	-	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	177558	+	AK290055|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_001164747|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_001164748|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_007211|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##BC030021|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AB093206|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665468|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665469|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665470|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665471|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AK296816|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145727|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)	0.92475	CTCF.p2:8:0.925
chr12	27974240	27974368	reg1014509.p2	9.147	+	TSC_hg19_v1_chr12_+_27933193 AK095405 NM_020782 BC137116 BC137117 BC108669 AB528162 AB587405 EU446834	-41093	+	NM_001146221	-50096	-	TSC_hg19_v1_chr12_+_27863764 BC015862 AK075378 AK075515 BC109372 BC063515 BC028346	-110530	+	M26958 J03802 NM_198964 NM_198966 AK313476 M26960 BC005961 M26959	148661	-	NM_002820 NM_198965	150611	-	TSC_hg19_v1_chr12_+_28343404 BC035168	369107	+	AK095405|KLHDC5|57542|kelch domain containing 5##NM_020782|KLHDC5|57542|kelch domain containing 5##BC137116|KLHDC5|57542|kelch domain containing 5##BC137117|KLHDC5|57542|kelch domain containing 5##BC108669|KLHDC5|57542|kelch domain containing 5##EU446834|KLHDC5|57542|kelch domain containing 5##NM_001146221|MANSC4|100287284|MANSC domain containing 4##BC015862|MRPS35|60488|mitochondrial ribosomal protein S35##AK075378|MRPS35|60488|mitochondrial ribosomal protein S35##AK075515|MRPS35|60488|mitochondrial ribosomal protein S35##BC109372|MRPS35|60488|mitochondrial ribosomal protein S35##BC063515|MRPS35|60488|mitochondrial ribosomal protein S35##BC028346|MRPS35|60488|mitochondrial ribosomal protein S35##M26958|PTHLH|5744|parathyroid hormone-like hormone##J03802|PTHLH|5744|parathyroid hormone-like hormone##NM_198964|PTHLH|5744|parathyroid hormone-like hormone##NM_198966|PTHLH|5744|parathyroid hormone-like hormone##AK313476|PTHLH|5744|parathyroid hormone-like hormone##M26960|PTHLH|5744|parathyroid hormone-like hormone##BC005961|PTHLH|5744|parathyroid hormone-like hormone##M26959|PTHLH|5744|parathyroid hormone-like hormone##NM_002820|PTHLH|5744|parathyroid hormone-like hormone##NM_198965|PTHLH|5744|parathyroid hormone-like hormone	0.028286	
chr1	51071290	51071404	reg1015259.p1	9.147	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	-182236	-	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-495809	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-496663	+	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	354230	-	TSC_hg19_v1_chr1_-_51425740 BC067100	354409	-	TSC_hg19_v1_chr1_-_51425796 AJ271408	354452	-	NM_032110|DMRTA2|63950|DMRT-like family A2##AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1##AJ271408|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.981091	CTCF.p2:3:0.981
chr17	38776296	38776434	reg1013055.p1	9.147	+	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	-54647	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	-118519	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-176546	+	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	27705	-	BC069196 TSC_hg19_v1_chr17_-_38804818	28431	-	BX538083 EU832123 EU832217 BC032815 AK092967 AK308598 NM_152349	44985	-	BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC069196|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BX538083|KRT222|125113|keratin 222##EU832123|KRT222|125113|keratin 222##EU832217|KRT222|125113|keratin 222##BC032815|KRT222|125113|keratin 222##AK308598|KRT222|125113|keratin 222##NM_152349|KRT222|125113|keratin 222	0.913105	CTCF.p2:-11:0.913
chr19	10527303	10527480	reg1009342.p1	9.147	+	TSC_hg19_v1_chr19_-_10514250 NM_007065	-13135	-	TSC_hg19_v1_chr19_-_10514219 BC000083 BC008793 U63131	-13178	-	AB463478 AM393285 AM393349 BT006796 CR542249 DQ892174 DQ895369 U43077 TSC_hg19_v1_chr19_-_10514182	-13222	-	AY593872 NM_001243121 TSC_hg19_v1_chr19_+_10527555	112	+	TSC_hg19_v1_chr19_+_10531189 L20965 NM_001111307	3839	+	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	14036	+	NM_007065|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC000083|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC008793|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U63131|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AM393285|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AM393349|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BT006796|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##CR542249|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ892174|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ895369|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U43077|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AY593872|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001243121|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##L20965|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111307|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific	0.194674	
chr3	112855064	112855188	reg1014819.p1	9.147	+	BC067743 TSC_hg19_v1_chr3_-_112738514 AK295954 AK293218 BC014673 NM_015412 CR749341	-116580	-	TSC_hg19_v1_chr3_-_112738512 AK301161 EU831596 EU831683 EU831956 EU832050 CU688320 AL117573 BC056663 AK295165 AK304022 AK024325 AK300811 AK304083	-116628	-	NM_014170 NM_138485 BC037163 TSC_hg19_v1_chr3_+_112709842 BC000003 AF161484 BC010137 AK289611 CU691454 DQ892307 DQ895506	-145304	+	AY358328 NM_033254 AK309055	76273	+	BC101582 BC113553 AK056472 NM_001164496 NM_018338	305213	-	TSC_hg19_v1_chr3_-_113233690 AK296160	378560	-	BC067743|C3orf17|25871|chromosome 3 open reading frame 17##AK295954|C3orf17|25871|chromosome 3 open reading frame 17##AK293218|C3orf17|25871|chromosome 3 open reading frame 17##BC014673|C3orf17|25871|chromosome 3 open reading frame 17##NM_015412|C3orf17|25871|chromosome 3 open reading frame 17##CR749341|C3orf17|25871|chromosome 3 open reading frame 17##AK301161|C3orf17|25871|chromosome 3 open reading frame 17##EU831596|C3orf17|25871|chromosome 3 open reading frame 17##EU831683|C3orf17|25871|chromosome 3 open reading frame 17##EU831956|C3orf17|25871|chromosome 3 open reading frame 17##EU832050|C3orf17|25871|chromosome 3 open reading frame 17##AL117573|C3orf17|25871|chromosome 3 open reading frame 17##BC056663|C3orf17|25871|chromosome 3 open reading frame 17##AK295165|C3orf17|25871|chromosome 3 open reading frame 17##AK304022|C3orf17|25871|chromosome 3 open reading frame 17##AK024325|C3orf17|25871|chromosome 3 open reading frame 17##AK300811|C3orf17|25871|chromosome 3 open reading frame 17##AK304083|C3orf17|25871|chromosome 3 open reading frame 17##NM_014170|GTPBP8|29083|GTP-binding protein 8 (putative)##NM_138485|GTPBP8|29083|GTP-binding protein 8 (putative)##BC037163|GTPBP8|29083|GTP-binding protein 8 (putative)##BC000003|GTPBP8|29083|GTP-binding protein 8 (putative)##AF161484|GTPBP8|29083|GTP-binding protein 8 (putative)##BC010137|GTPBP8|29083|GTP-binding protein 8 (putative)##AK289611|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ892307|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ895506|GTPBP8|29083|GTP-binding protein 8 (putative)##AY358328|BOC|91653|Boc homolog (mouse)##NM_033254|BOC|91653|Boc homolog (mouse)##AK309055|BOC|91653|Boc homolog (mouse)##BC101582|WDR52|55779|WD repeat domain 52##BC113553|WDR52|55779|WD repeat domain 52##AK056472|WDR52|55779|WD repeat domain 52##NM_001164496|WDR52|55779|WD repeat domain 52##NM_018338|WDR52|55779|WD repeat domain 52##AK296160|SPICE1|152185|spindle and centriole associated protein 1	0.998923	CTCF.p2:-7:0.999
chr3	56337751	56337869	reg1013106.p1	9.147	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-816192	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-816478	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-822402	-	BC111550 BC112391 AB002376 NM_015576	164567	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	253392	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	253436	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.177217	
chr5	52774285	52774407	reg1014685.p1	9.147	+	TSC_hg19_v1_chr5_-_52405588 BC029287 AF091871 AF117815 AK312887 NM_176806 BC095417	-368750	-	BC046097 AF155659 NM_004531	-369041	-	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	-489226	+	NM_006350 NM_013409 TSC_hg19_v1_chr5_+_52776278	1931	+	TSC_hg19_v1_chr5_+_52776409 BC004107	2066	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	2204	+	BC029287|MOCS2|4338|molybdenum cofactor synthesis 2##AF091871|MOCS2|4338|molybdenum cofactor synthesis 2##AF117815|MOCS2|4338|molybdenum cofactor synthesis 2##AK312887|MOCS2|4338|molybdenum cofactor synthesis 2##NM_176806|MOCS2|4338|molybdenum cofactor synthesis 2##BC095417|MOCS2|4338|molybdenum cofactor synthesis 2##BC046097|MOCS2|4338|molybdenum cofactor synthesis 2##AF155659|MOCS2|4338|molybdenum cofactor synthesis 2##NM_004531|MOCS2|4338|molybdenum cofactor synthesis 2##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##NM_006350|FST|10468|follistatin##NM_013409|FST|10468|follistatin##BC004107|FST|10468|follistatin##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin	0.967875	CTCF.p2:-2:0.968
chr19	40030869	40031003	reg1014376.p2	9.146	+	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	-116	-	TSC_hg19_v1_chr19_-_40023460 BC040157 BC051333 AK096263 NM_152361 BC009725	-7449	-	AY324825 NM_182704 BC117331	-25167	+	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	62249	+	FJ613352 NM_001190441	115609	+	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	164107	+	AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC040157|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##BC051333|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##AK096263|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##NM_152361|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##BC009725|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##AY324825|SELV|348303|selenoprotein V##NM_182704|SELV|348303|selenoprotein V##BC117331|SELV|348303|selenoprotein V##BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14	0.122693	
chr6	135505102	135505191	reg1009270.p1	9.146	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	-2560	+	TSC_hg19_v1_chr6_+_135502507 BC064955	-2651	+	TSC_hg19_v1_chr6_+_135502445 AJ606317 AJ606318 AJ606319 AJ606320 AJ606321 AJ606322 AJ606323 AJ606324 NM_001130172 NM_001130173 NM_001161656 NM_001161657 NM_001161658 NM_001161659 NM_001161660 NM_005375 X52125	-2698	+	TSC_hg19_v1_chr6_+_135516916 AJ616799	11760	+	TSC_hg19_v1_chr6_+_135517056 X17469	11943	+	AY133243 TSC_hg19_v1_chr6_-_135818858 DQ090887	313679	-	AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##X17469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY133243|AHI1|54806|Abelson helper integration site 1##DQ090887|AHI1|54806|Abelson helper integration site 1	0.888989	CTCF.p2:29:0.889
chr11	58953873	58954005	reg1016646.p1	9.145	+	TSC_hg19_v1_chr11_+_58940008 AB023154 AB385405	-13910	+	TSC_hg19_v1_chr11_+_58939648 NM_015177	-14254	+	NM_022074 NM_198847 AK291453 BC071759 AK092061 AX747338	-41660	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	26468	-	BC140917 NM_001004729	177968	+	NM_001001954 BC136991	236497	-	AB023154|DTX4|23220|deltex homolog 4 (Drosophila)##NM_015177|DTX4|23220|deltex homolog 4 (Drosophila)##NM_022074|FAM111A|63901|family with sequence similarity 111, member A##NM_198847|FAM111A|63901|family with sequence similarity 111, member A##AK291453|FAM111A|63901|family with sequence similarity 111, member A##BC071759|FAM111A|63901|family with sequence similarity 111, member A##AK092061|FAM111A|63901|family with sequence similarity 111, member A##BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1##BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001001954|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC136991|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2	0.999012	CTCF.p2:-3:0.999
chr22	28838332	28838458	reg1014757.p1	9.145	+	TSC_hg19_v1_chr22_-_28315245 BC018704 D30037 AK313064 CR456541 NM_012399	-523131	-	TSC_hg19_v1_chr22_-_28315203 BC031427	-523188	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	-523221	-	TSC_hg19_v1_chr22_-_29075801 NM_001145418	237398	-	BC004207 AK289360 CR456418 NM_001005735 NM_007194 NM_145862 AK290754 AB164374	299422	-	BC000004 TSC_hg19_v1_chr22_+_29138056 NM_172002 BC065569 CR456462 AY191719 AB528150 CU013013 CU013301	299666	+	BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta##D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta##CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_001145418|TTC28|23331|tetratricopeptide repeat domain 28##BC004207|CHEK2|11200|checkpoint kinase 2##AK289360|CHEK2|11200|checkpoint kinase 2##CR456418|CHEK2|11200|checkpoint kinase 2##NM_001005735|CHEK2|11200|checkpoint kinase 2##NM_007194|CHEK2|11200|checkpoint kinase 2##NM_145862|CHEK2|11200|checkpoint kinase 2##AK290754|CHEK2|11200|checkpoint kinase 2##NM_172002|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##BC065569|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##CR456462|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##AY191719|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)	0.0	
chr4	40845896	40846035	reg1016002.p1	9.145	+	BC042401 NM_024677 BC036568 AK024063	-94019	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-213258	-	TSC_hg19_v1_chr4_-_40631882 BC034402 BC071585 NM_001098634	-214100	-	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	13210	-	BC088372 TSC_hg19_v1_chr4_-_40936716	90713	-	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	370604	-	BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK304206|RBM47|54502|RNA binding motif protein 47##BC034402|RBM47|54502|RNA binding motif protein 47##BC071585|RBM47|54502|RNA binding motif protein 47##NM_001098634|RBM47|54502|RNA binding motif protein 47##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	0.018688	
chr21	24164436	24164540	reg1012591.p2	9.143	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-1793715	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-1793798	+	TSC_hg19_v1_chr21_+_22370656 BC052946 NM_004540	-1793846	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	1636580	+	TSC_hg19_v1_chr21_+_26934442 AF402776	2769984	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	2815327	-	BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##BC052946|NCAM2|4685|neural cell adhesion molecule 2##NM_004540|NCAM2|4685|neural cell adhesion molecule 2##AK124194|FLJ42200|400860|FLJ42200 protein##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39	0.99842	CTCF.p2:-2:0.998
chr4	125183489	125183603	reg1014645.p1	9.143	+	AK026960 BC063856 NM_005841	-862873	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-865590	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-1339294	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	450268	-	NM_024582	1054020	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	3370593	+	AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	0.989723	CTCF.p2:17:0.990
chr12	57454878	57455020	reg1015500.p1	9.142	+	AF105424 AF127026 NM_005379 BC059387	-11070	-	AF216586 AF186112 AX810719 AF136174 AX810703 AF537113 AF537114 AF537115 AF537116 AF537117 AF537118 AF537119 AF537120 AF537121 AY358679 BC032145 NM_001178054 NM_013251	-44640	-	BC140890 BC146867 AB002350 BC152461 TSC_hg19_v1_chr12_-_57400241 AK292468 NM_014830	-54698	-	TSC_hg19_v1_chr12_-_57472533 HQ258223 AB383838 AB006624	17562	-	TSC_hg19_v1_chr12_-_57472537 BC071597 BC117436 BC126300 BC144029 CR749406 AK294566	17591	-	TSC_hg19_v1_chr12_-_57472548 AL833310 AL833311	17600	-	AF105424|MYO1A|4640|myosin IA##AF127026|MYO1A|4640|myosin IA##NM_005379|MYO1A|4640|myosin IA##BC059387|MYO1A|4640|myosin IA##AF216586|TAC3|6866|tachykinin 3##AF186112|TAC3|6866|tachykinin 3##AF537113|TAC3|6866|tachykinin 3##AF537114|TAC3|6866|tachykinin 3##AF537115|TAC3|6866|tachykinin 3##AF537116|TAC3|6866|tachykinin 3##AF537117|TAC3|6866|tachykinin 3##AF537118|TAC3|6866|tachykinin 3##AF537119|TAC3|6866|tachykinin 3##AF537120|TAC3|6866|tachykinin 3##AF537121|TAC3|6866|tachykinin 3##AY358679|TAC3|6866|tachykinin 3##BC032145|TAC3|6866|tachykinin 3##NM_001178054|TAC3|6866|tachykinin 3##NM_013251|TAC3|6866|tachykinin 3##BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39##BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39##AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39##BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39##AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39##NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39##HQ258223|TMEM194A|23306|transmembrane protein 194A##AB006624|TMEM194A|23306|transmembrane protein 194A##BC071597|TMEM194A|23306|transmembrane protein 194A##BC117436|TMEM194A|23306|transmembrane protein 194A##BC126300|TMEM194A|23306|transmembrane protein 194A##BC144029|TMEM194A|23306|transmembrane protein 194A##CR749406|TMEM194A|23306|transmembrane protein 194A##AK294566|TMEM194A|23306|transmembrane protein 194A##AL833310|TMEM194A|23306|transmembrane protein 194A##AL833311|TMEM194A|23306|transmembrane protein 194A	0.967562	CTCF.p2:23:0.968
chr15	72578409	72578512	reg1014451.p2	9.142	+	NM_020214	-14833	-	TSC_hg19_v1_chr15_-_72523728 NM_001206796 NM_001206797 NM_001206798 NM_002654 NM_182470 NM_182471	-54732	-	TSC_hg19_v1_chr15_-_72523565 AK307855	-54893	-	AK294382 NM_001172685	20195	-	AK124858 TSC_hg19_v1_chr15_-_72612227 AK296004 BC030835	33717	-	TSC_hg19_v1_chr15_-_72612248 AF425606 AK308073 NM_001172684	33806	-	NM_020214|PARP6|56965|poly (ADP-ribose) polymerase family, member 6##NM_001206796|PKM2|5315|pyruvate kinase, muscle##NM_001206797|PKM2|5315|pyruvate kinase, muscle##NM_001206798|PKM2|5315|pyruvate kinase, muscle##NM_002654|PKM2|5315|pyruvate kinase, muscle##NM_182470|PKM2|5315|pyruvate kinase, muscle##NM_182471|PKM2|5315|pyruvate kinase, muscle##AK307855|PKM2|5315|pyruvate kinase, muscle##AK294382|CELF6|60677|CUGBP, Elav-like family member 6##NM_001172685|CELF6|60677|CUGBP, Elav-like family member 6##AK124858|CELF6|60677|CUGBP, Elav-like family member 6##AK296004|CELF6|60677|CUGBP, Elav-like family member 6##BC030835|CELF6|60677|CUGBP, Elav-like family member 6##AF425606|CELF6|60677|CUGBP, Elav-like family member 6##NM_001172684|CELF6|60677|CUGBP, Elav-like family member 6	0.951525	CTCF.p2:-5:0.952
chr1	62873199	62873330	reg1012942.p1	9.142	+	TSC_hg19_v1_chr1_-_62785084 AB284127 BC060866 NM_181712	-88185	-	AK091941 AX747268 TSC_hg19_v1_chr1_-_62785028	-88265	-	NM_001164835 NM_019079 BC012555 BC060808 AB211065 AL834314 AK001973 BC111559	-212748	+	NM_001017415 NM_001017416	28710	+	BC040140 BC018745 NM_003368	29089	+	TSC_hg19_v1_chr1_+_62902702 BC050525	29414	+	AB284127|KANK4|163782|KN motif and ankyrin repeat domains 4##BC060866|KANK4|163782|KN motif and ankyrin repeat domains 4##NM_181712|KANK4|163782|KN motif and ankyrin repeat domains 4##AK091941|KANK4|163782|KN motif and ankyrin repeat domains 4##NM_001164835|L1TD1|54596|LINE-1 type transposase domain containing 1##NM_019079|L1TD1|54596|LINE-1 type transposase domain containing 1##BC012555|L1TD1|54596|LINE-1 type transposase domain containing 1##BC060808|L1TD1|54596|LINE-1 type transposase domain containing 1##AB211065|L1TD1|54596|LINE-1 type transposase domain containing 1##AL834314|L1TD1|54596|LINE-1 type transposase domain containing 1##AK001973|L1TD1|54596|LINE-1 type transposase domain containing 1##BC111559|L1TD1|54596|LINE-1 type transposase domain containing 1##NM_001017415|USP1|7398|ubiquitin specific peptidase 1##NM_001017416|USP1|7398|ubiquitin specific peptidase 1##BC040140|USP1|7398|ubiquitin specific peptidase 1##BC018745|USP1|7398|ubiquitin specific peptidase 1##NM_003368|USP1|7398|ubiquitin specific peptidase 1##BC050525|USP1|7398|ubiquitin specific peptidase 1	0.974353	CTCF.p2:8:0.974
chr4	142632507	142632637	reg1015300.p1	9.142	+	AK290619 NM_000585 NM_172175 BC018149 U14407	-74806	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-490486	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-490517	+	NM_001101669 NM_003866	1135031	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	1473492	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	1473553	+	AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38	0.284369	CTCF.p2:-2:0.284
chr6	42071995	42072122	reg1013259.p1	9.141	+	TSC_hg19_v1_chr6_+_42018268 BC018796 AF465841 CU689710	-53787	+	BC033728 NM_138572 TSC_hg19_v1_chr6_+_42018261 AK057383 BC119678 BC119679 AL833401	-53802	+	NM_001136017 NM_001136126	-55449	-	NM_001164446	38656	-	AK313865 NM_000409 BC031663 AK125780	51105	+	BX537393 NM_002098	90635	-	BC018796|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AF465841|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC033728|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##NM_138572|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AK057383|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119678|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119679|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AL833401|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##NM_001136017|CCND3|896|cyclin D3##NM_001136126|CCND3|896|cyclin D3##NM_001164446|C6orf132|647024|chromosome 6 open reading frame 132##AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)##NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)##BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)##AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)##BX537393|GUCA1B|2979|guanylate cyclase activator 1B (retina)##NM_002098|GUCA1B|2979|guanylate cyclase activator 1B (retina)	0.865512	CTCF.p2:-9:0.866
chr10	42673903	42674055	reg1015902.p1	9.140	+	TSC_hg19_v1_chr10_-_38691741 BC171738 BC042387 BC048143	-3982223	-	AK295332 AY829267 AF165514 AF165517 BC071987 TSC_hg19_v1_chr10_+_38645320 AK293968 AK307174 CU687208	-4028642	+	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	-4290696	+	TSC_hg19_v1_chr10_-_42863441 AF519622 AK131313	189484	-	AX721135 TSC_hg19_v1_chr10_-_43048257 AK308832 AK026980 BC045697 AX721116	374223	-	TSC_hg19_v1_chr10_-_43134018 BC109232 BC160932 BC065181 BC107726 BC048313 AJ491697 NM_006955 AK096683 AK309564 AK304306 BC036398	460019	-	BC171738|SEPT7L|285961|septin 7-like##BC042387|SEPT7L|285961|septin 7-like##BC048143|SEPT7L|285961|septin 7-like##AK295332|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AY829267|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165514|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165517|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC071987|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK293968|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK307174|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A##AF519622|LOC441666|441666|zinc finger protein 91 pseudogene##AK308832|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##AK026980|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC045697|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC109232|ZNF33B|7582|zinc finger protein 33B##BC160932|ZNF33B|7582|zinc finger protein 33B##BC065181|ZNF33B|7582|zinc finger protein 33B##BC107726|ZNF33B|7582|zinc finger protein 33B##BC048313|ZNF33B|7582|zinc finger protein 33B##AJ491697|ZNF33B|7582|zinc finger protein 33B##NM_006955|ZNF33B|7582|zinc finger protein 33B##AK096683|ZNF33B|7582|zinc finger protein 33B##AK309564|ZNF33B|7582|zinc finger protein 33B##AK304306|ZNF33B|7582|zinc finger protein 33B##BC036398|ZNF33B|7582|zinc finger protein 33B	0.829185	CTCF.p2:-23:0.829
chr1	10010487	10010623	reg1013438.p1	9.140	+	TSC_hg19_v1_chr1_+_10003532 AK315640	-7012	+	NM_022787 BC014943 TSC_hg19_v1_chr1_+_10003497 AK026065 AK222920	-7059	+	TSC_hg19_v1_chr1_-_10003358 AB060688 BC007240 AK304348 AK312550	-7182	-	BC063013 NM_052960 BC033883 AF399927 AK312027 AY145438 CU687628	46729	+	TSC_hg19_v1_chr1_+_10093015 AB028839 NM_001105562 NM_006048	82460	+	AB014584 TSC_hg19_v1_chr1_+_10093218	82658	+	AK315640|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##NM_022787|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##BC014943|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK026065|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK222920|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AB060688|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##BC007240|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK304348|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK312550|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##BC063013|RBP7|116362|retinol binding protein 7, cellular##NM_052960|RBP7|116362|retinol binding protein 7, cellular##BC033883|RBP7|116362|retinol binding protein 7, cellular##AF399927|RBP7|116362|retinol binding protein 7, cellular##AK312027|RBP7|116362|retinol binding protein 7, cellular##AY145438|RBP7|116362|retinol binding protein 7, cellular##AB028839|UBE4B|10277|ubiquitination factor E4B##NM_001105562|UBE4B|10277|ubiquitination factor E4B##NM_006048|UBE4B|10277|ubiquitination factor E4B##AB014584|UBE4B|10277|ubiquitination factor E4B	0.874027	CTCF.p2:0:0.874
chr16	21168159	21168309	reg1015546.p1	9.140	+	TSC_hg19_v1_chr16_+_20912407 BC017039	-255826	+	AK311415 NM_001128301 NM_001128302 TSC_hg19_v1_chr16_+_20912121 AK311881	-256113	+	BX648998 NM_173475 TSC_hg19_v1_chr16_-_20911681 BC040442 BX648185	-256584	-	NM_020422 TSC_hg19_v1_chr16_+_21169994 AK074667 AK293557 BC015812	1748	+	AF494040 NM_017539	2527	-	BC096304 BC096305 BC096306 BC096307 M90366 NM_003460 AK313003 AK293805 AK308820	54646	-	BC017039|LYRM1|57149|LYR motif containing 1##AK311415|LYRM1|57149|LYR motif containing 1##NM_001128301|LYRM1|57149|LYR motif containing 1##NM_001128302|LYRM1|57149|LYR motif containing 1##AK311881|LYRM1|57149|LYR motif containing 1##BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_020422|TMEM159|57146|transmembrane protein 159##AK074667|TMEM159|57146|transmembrane protein 159##AK293557|TMEM159|57146|transmembrane protein 159##BC015812|TMEM159|57146|transmembrane protein 159##AF494040|DNAH3|55567|dynein, axonemal, heavy chain 3##NM_017539|DNAH3|55567|dynein, axonemal, heavy chain 3##BC096304|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096305|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096306|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096307|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##M90366|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##NM_003460|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK313003|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK293805|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK308820|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)	0.595994	CTCF.p2:-16:0.596
chr15	45471479	45471585	reg1014066.p2	9.139	+	AK290372 AF213465 NM_017434 NM_175940 AK075268 AF230495 BC114628 BC114938	-49366	+	BC029819 NM_144565 AK292771 BC020841 TSC_hg19_v1_chr15_-_45422078 AK056896	-49464	-	TSC_hg19_v1_chr15_+_45406523 NM_207581 AK303955 BC137465 BX537581 DQ489734	-64938	+	TSC_hg19_v1_chr15_-_45480165 AK094391 AK303749	8632	-	AK096267 NM_138356	21840	-	AK222709 NM_004212 U84392 AK291974	72909	+	AK290372|DUOX1|53905|dual oxidase 1##AF213465|DUOX1|53905|dual oxidase 1##NM_017434|DUOX1|53905|dual oxidase 1##NM_175940|DUOX1|53905|dual oxidase 1##AK075268|DUOX1|53905|dual oxidase 1##AF230495|DUOX1|53905|dual oxidase 1##BC114628|DUOX1|53905|dual oxidase 1##BC114938|DUOX1|53905|dual oxidase 1##BC029819|DUOXA1|90527|dual oxidase maturation factor 1##NM_144565|DUOXA1|90527|dual oxidase maturation factor 1##AK292771|DUOXA1|90527|dual oxidase maturation factor 1##BC020841|DUOXA1|90527|dual oxidase maturation factor 1##AK056896|DUOXA1|90527|dual oxidase maturation factor 1##NM_207581|DUOXA2|405753|dual oxidase maturation factor 2##AK303955|DUOXA2|405753|dual oxidase maturation factor 2##BC137465|DUOXA2|405753|dual oxidase maturation factor 2##BX537581|DUOXA2|405753|dual oxidase maturation factor 2##DQ489734|DUOXA2|405753|dual oxidase maturation factor 2##AK094391|SHF|90525|Src homology 2 domain containing F##AK303749|SHF|90525|Src homology 2 domain containing F##AK096267|SHF|90525|Src homology 2 domain containing F##NM_138356|SHF|90525|Src homology 2 domain containing F##AK222709|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##NM_004212|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##U84392|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK291974|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2	0.957308	CTCF.p2:-3:0.957
chr2	218007523	218007642	reg1014529.p1	9.139	+	BC029516 NM_003284	-282801	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-447322	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-448016	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	801199	-	AK001785 TSC_hg19_v1_chr2_-_218843551	835964	-	TSC_hg19_v1_chr2_-_218867719 AK309785	860141	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.998436	CTCF.p2:-7:0.998
chr10	6458994	6459109	reg1012402.p1	9.138	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-214175	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-272139	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-272167	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	163210	-	TSC_hg19_v1_chr10_+_6622460 AY007155	163429	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	992199	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.051844	
chr2	13334196	13334309	reg1012856.p1	9.138	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-475855	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	-476336	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-476999	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	1438569	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	1438599	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	2367177	-	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence	0.99839	CTCF.p2:-6:0.998
chr2	84530159	84530299	reg1015854.p1	9.138	+	TSC_hg19_v1_chr2_-_80531838 AK225779	-3998386	-	TSC_hg19_v1_chr2_-_80531719 AK290512	-3998504	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	-3998704	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	156141	-	AK296741 TSC_hg19_v1_chr2_-_84686396	156166	-	NM_003849	156356	-	AK225779|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit	0.997385	CTCF.p2:-3:0.997
chr7	41042776	41042911	reg1013532.p1	9.138	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-868234	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-868312	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	-868712	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	699842	-	NM_000168	1233774	-	TSC_hg19_v1_chr7_-_42276797 AK308429	1233952	-	AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3	0.998983	CTCF.p2:-9:0.999
chr14	106465922	106466100	reg1002200.p3	9.135	+	TSC_hg19_v1_chr14_-_106453169 X17117 AK129517 AK130825 BC065733 X59702	-12841	-	U32200 U32268 U32334 U32335 U32336 U32488 U32490 U32599 U32608 U32609 U32947 U32948 U32950 U32963 U33799 U33801 AF028098 AF028106 AF028107 AF028114 AF028118 AY155550 AY155551 DQ454559 AF460797 AF460726 AF460724 AF460827 DQ454629 DQ454614 DQ454962 GQ232822 DQ454705 DQ523871 DQ454580 DQ523917 DQ523919 AY003767 DQ454466 DQ454560 DQ454565 DQ454682 EU099268 GU552685 AY003808 AY003836 DQ454469 DQ454795 DQ454971 DQ454985 DQ454452 DQ454571 DQ454944 DQ454960 DQ523896 EF583670 DQ454558 DQ454677 DQ454859 DQ454868 DQ455000 DQ523852 DQ523901 DQ454442 DQ523848 HQ704012 DQ100720 DQ454840 DQ454949 FJ840328 FJ873931 HM116191 GQ232887 AJ487491 AJ487492 AJ487493 AJ487498 AJ487506 AY003837 JF810257 AF069907 EF091912 EF175411 EF175427 EF583661 EU350413 EU433868 EU433869 EU433881 EU667601 EU667602 FJ694875 GQ232782 GQ232813 GQ232814 GQ232841 GQ232875 GQ232936 GQ232966 GQ232996 JF810256 GQ232768 EF441747 EF583659 AF103205 AF103114 EF566909 U86787 AF484410 HQ392886 JF894284 AM279467 AM279468 AM279469 AM279470 AM279471 AM279552 AM279555 AM279588 AM279641 AF308558 EU099276 GQ232957 AF408722 HM774202 EU099163 HM774025 HM774888 HM775065 JN110525 JN110528 JN111117 L04330 L04332 L04340 FJ385388 FJ385429 GQ504861 HM774080 HM774150 HM774407 HM774529 HM774561 HM774885 HQ704005 HQ704037 S73138 AF103263 AF082193 AJ008249 AY099261 AY206987 AY998750 DQ097896 EU099144 EU099173 EU099285 AF402947 X94432 AM183993 AY393351 EU099152 EU099269 EU099281 AF306372 AJ236544 AJ271548 AY193806 AY376076 AY376077 AY376090 AY393002 AY393003 AY393011 AY393020 AY393107 AY393113 AY393114 AY393116 AY393122 AY393139 AY393140 AY393227 AY393228 AY393241 AY393250 AY393254 AY393257 AY393259 AY393354 AY393357 AY393363 AY393377 AY393497 AY393500 AY393506 AY393509 AY393511 AY393533 AY393613 AY393616 AY393617 AY393633 AY393637 AY393653 AY393671 AY393676 EU099082 EU099119 EU099146 JF894280 HM995126 JN159306 HM995172 HM995197 HM995672 AY941929 DQ100708 DQ100722 DQ523939 DQ523940 DQ524004 DQ524046 DQ524048 DQ524070 DQ524135 HM994894 HM995065 HM995066 HM995070 HM995071 HM995072 HM995073 HM995088 HM995175 HM995192 HM995193 HM995194 HM995195 HM995196 HM995198 HM995281 HM995297 HM995349 HM995351 HM995538 HM995541 HM995542 HM995586 HM995587 HM995589 HM995591 HM995593 HM995610 HM995612 HM995613 HM996403 HM996541 AY971055 DQ926099 AB063667 AB063719 AB063917 AB066970 AB066981 AB067004 AB067009 AB067029 AB067072 AB067119 AB067126 AB067131 AB067253 AB363079 AB363093 AB363142 AB363149 AB363155 AF035019 AF035020 AF209860 AJ239337 AJ308447 AY033279 AY033280 AY376105 AY866614 AY941843 AY941858 AY941885 AY941903 AY941937 AY944702 AY944720 DQ065631 DQ065643 DQ065667 DQ065682 DQ065683 DQ065690 DQ065691 DQ926090 DQ926220 DQ926223 DQ926495 DQ926527 EF178106 EU549725 EU549730 FJ385284 FJ385396 HQ378330 JF894278 JF894282 JF894286 U07988 AB063662 AB063801 AB063829 AB063919 AB066925 AB066926 AB066963 AB067152 AB067166 AB067301 AB067307 AB067308 AB067329 AB067390 AB067393 AB363083 AB363143 AB363151 AB363161 AF006523 AF021941 AF021969 AF022007 AF035786 AF062092 AF062194 AF062195 AF062197 AF115113 AF115129 AF174043 AF174084 AF174094 AF174099 AF174107 AF174114 AF174125 AF174127 AF302820 AF455545 AF455547 AJ239344 AJ239371 AJ308466 AJ389196 AJ414005 AJ414014 AJ617573 AY033238 AY055487 AY345921 AY553642 AY553645 AY577308 AY577310 AY640563 AY866611 AY941911 AY941936 AY941945 AY971057 AY971071 DQ100662 DQ100680 DQ100786 DQ100789 DQ100800 DQ100816 DQ100914 DQ100919 DQ225091 DQ926031 DQ926058 DQ926059 DQ926135 DQ926486 DQ926543 FJ385320 FJ385387 GU570212 GU570215 GU570217 GU570269 HQ689739 JF806453 JF806454 JN158766 JN158852 JN159083 JN159282 JN159291 JN159293 JN159302 JN159305 JN159446 L14456 L23558 S73506 U00499 U00505 U00539 U00554 U00562 U00568 U00586 U71104 U85231 U85241 U86522 Z18846 Z34893 Z92888 AF035803 AY686906 AY686915 AY944693 AY944713 AY944721 DQ535285 DQ535302 DQ535348 DQ535375 DQ535476 EF177970 EF178023 EF178112 EF178115 EF178119 EF178135 HM995869 HM995871 AY957509 AY957510 FJ039793 AF062143 AF062151 AF062178 AF062179 AF062226 AF062256 AF062257 AF062262 AF062267 AF062271 AF067121 AF174005 AF174006 AF174009 AF174016 AF174031 AJ009732 M29468 U43758 U43762 Z14213 Z36889 Z46348 Z47223 Z80852 L23559 M24668 AJ010445 TSC_hg19_v1_chr14_-_106453155 BC080557 M18512	-13086	-	AF064915 AF267793 DQ454464 FN563613 FN563615 FN563617 FN563618 FN563619 FN563620 FN563733 FN563734 AF460793 AY393595 DQ523938 FN563493 FN563497 FN563498 FN563499 FN563500 FN563501 FN563502 FN563503 FN563504 FN563505 FN563506 FN563508 FN563532 FN563533 FN563534 FN563535 FN563536 FN563537 FN563539 FN563541 FN563542 FN563543 FN563544 FN563545 FN563546 FN563547 FN563548 FN563549 FN563550 FN563551 FN563552 FN563553 FN563554 FN563555 FN563556 FN563557 FN563558 FN563559 FN563560 FN563561 FN563562 FN563563 FN563564 FN563565 FN563566 FN563568 FN563569 FN563570 FN563601 FN563604 FN563605 FN563606 FN563607 FN563608 FN563610 FN563638 FN563639 FN563640 FN563641 FN563642 FN563643 FN563644 FN563645 FN563646 FN563647 FN563648 FN563649 FN563650 FN563651 FN563652 FN563653 FN563654 FN563655 FN563656 FN563657 FN563658 FN563659 FN563660 FN563661 FN563674 FN563675 FN563676 FN563677 FN563678 FN563679 FN563680 FN563681 FN563682 FN563683 FN563684 FN563685 FN563686 FN563687 FN563688 FN563689 FN563690 FN563691 FN563692 FN563693 FN563694 FN563695 FN563696 FN563697 FN563698 FN563727 FN563728 FN563729 FN563730 FN563731 FN563732 FN563741 FN563742 FN563743 FN563744 FN563745 FN563746 FN563747 FN563748 FN563749 FN563750 FN563751 FN563752 DQ454919 DQ454917 DQ454897 M71234 DQ454581 DQ454690 DQ454896 DQ454978 DQ454888 DQ454959 DQ454895 AF017457 M71225 M71226 DQ523915 L04771 AJ008198 AJ008199 DQ454824 S75894 EU099248 EF407841 JF810281 L21746 AF459631 S76902 AF343422 AF343424 M99372 L21747 DQ454899 AY393584 AY393323 AY393326 AY393327 AY393332 AY393473 AY393474 AY393476 AY393477 AY393479 AY393484 AY393486 AY393487 AY393488 AY393489 AY393490 AY393492 AY393574 AY393575 AY393576 AY393577 AY393578 AY393579 AY393580 AY393581 AY393582 AY393583 AY393585 AY393586 AY393587 AY393588 AY393589 AY393590 AY393591 AY393592 AY393593 AY393594 EU099263 L21734 X65920 DQ524023 AF103096 AF035040 DQ523994 L21733 L21738 L21729 AF015136 AF015137 AF015139 AF015140 AF015141 AF015144 AF015145 AF015146 JN110879 JN110884 JN110895 JN110931 L04333 L04338 L04341 L04762 L04763 L04768 L04769 L04770 L04772 L21726 L21727 L21730 L21731 L21732 L21735 L21736 L21737 L21739 L21740 L21741 L21742 L21744 L21745 L21748 M71217 M71219 M71223 M71227 M71228 M71229 M71230 M71233 U13195 U13196 U13197 U13198 U13199 U13200 U13201 U13202 FJ385406 AF082200 AF103769 AF361061 AF361062 AF361063 AF361064 AF361065 AF361066 AF361067 AF361068 AF361069 AF361070 AF361071 AF361072 U21271 DQ524163 AF166264 L38894 U21250 U21251 U21263 U21264 U21265 AJ239381 AJ007440 DQ523936 DQ523948 DQ523949 DQ523956 DQ523961 DQ523963 DQ523978 DQ523981 DQ523982 DQ523983 DQ523996 DQ523998 DQ524010 DQ524016 DQ524025 DQ524056 DQ524063 DQ524064 DQ524066 DQ524067 DQ524069 DQ524071 DQ524073 DQ524075 DQ524076 DQ524078 DQ524081 DQ524082 DQ524083 DQ524084 DQ524085 DQ524086 DQ524091 DQ524093 DQ524094 DQ524095 DQ524097 DQ524098 DQ524101 DQ524103 DQ524105 DQ524106 DQ524107 DQ524109 DQ524112 DQ524113 DQ524116 DQ524119 DQ524121 DQ524122 DQ524123 DQ524128 DQ524129 DQ524139 DQ524145 DQ524156 DQ524157 DQ926041 HM996448 AF129749 U00535 AB063677 AB063678 AB063679 AB063680 AB063686 AB063687 AB063697 AB063724 AB063750 AB063809 AB063891 AB063907 AB063912 AB063922 AB066943 AB066951 AB066952 AB067336 AB067338 AB067339 AB067340 AB067341 AB067342 AB067343 AB067344 AB067347 AB067349 AB067351 AB067353 AB067355 AB067357 AB067358 AB067361 AB067363 AB067364 AB067365 AB067366 AB067368 AB067369 AB067370 AB067373 AB067374 AB067376 AF013615 AF021985 AF035039 AF062123 AF062213 AF062284 AF078942 AF110149 AF174044 AJ308465 AM279625 AM279626 AM279627 AY033244 AY033245 AY033248 AY033249 AY033259 AY033260 AY033261 AY033269 AY033277 AY033278 AY270187 AY270188 AY270189 AY685266 AY941880 AY941881 AY941882 AY941890 AY941918 AY941924 AY941925 AY971140 DQ005277 DQ005294 DQ100886 DQ100891 DQ100997 DQ205179 DQ212525 DQ212526 DQ535278 DQ535313 DQ535323 DQ926075 DQ926092 DQ926147 DQ926280 DQ926430 DQ926455 DQ926581 DQ926593 EF178076 FJ385286 FJ490201 HQ378327 S71250 U00548 U00558 X67879 X67880 X67881 X67882 X67883 X67884 X67885 X67886 X67887 X67888 X67889 X67890 X67891 X67892 X67893 X67894 X67895 X67896 X67897 X67898 X67900 Z15110 M18510 Z14210 Z14207 Z14209 AY392985 AY392987 AY392988 AY392989 AY392990 AY392991 AY392992 AY392993 AY392994 AY392995 AY392997 AY392998 AY393098 AY393099 AY393100 AY393101 AY393102 AY393103 AY393104 AY393205 AY393206 AY393207 AY393208 AF062114 AF062137 AF062165 AF062219 AF062254 AF062273 AY452136 AY452137 L21957 X65916 X65917 X65918 Z14158 Z14159 Z14160 Z14161 Z14162 Z14163 Z14164 Z14184 Z14185 Z14186 Z14187 Z14188 Z14208 Z14211 Z14223 Z47236 BC089412 AY510105 M34029 BX648616 TSC_hg19_v1_chr14_-_106406109	-60140	-	GQ232825 GU552779 GU552687 GU552689 AY003848 FJ873924 FJ873955 GQ232946 HM116167 EF407847 EU350414 GQ232973 HM774711 EF407839 EF441752 U86801 AF211930 AM279559 HM774196 EU099286 EU146322 L04328 L04336 L04337 L33037 AY062319 FJ385375 FJ385408 FJ385414 FJ385418 FJ385419 HM774332 HM774418 HM774599 HM774606 AF103282 EU099067 EU099203 EU099287 EU146373 EU146380 FJ385394 EU099221 EU099283 AF306375 AF306376 AM259139 AY062320 AY392849 AY393007 AY393013 AY393111 AY393223 AY393232 AY393255 AY393368 AY393531 AY393610 AY393666 DQ100814 EU099253 HM996275 AY033262 AY033283 EF177964 FJ385299 AB022655 AB067168 AB067394 AF022000 AJ239360 AJ414006 AY553644 AY553647 AY885171 DQ926345 FJ039788 HM152522 M17750 M17751 U00569 U00580 AY686877 AY944696 DQ535282 DQ535443 DQ535465 DQ535484 EF178053 EF178130 FJ195468 FJ195471 HM152519 AF062134 AF062139 AF062140 AF062142 AF062221 L01278 X65883 X65885 X65887 X65888 X65891 X65892 X65893 Z47274 Z47275 Z47276 Z47277 Z80847 BC075840 TSC_hg19_v1_chr14_-_106471733 BX640724 AK097348 AK126543 AK304469 BX640847 S42403	5646	-	U49664 U32269 U32952 AY312398 AY312399 DQ454445 DQ454564 DQ454725 DQ524089 DQ454727 DQ454701 AF460719 AF460723 AF460756 AF460759 AF460771 AF460834 AF460823 AF460829 AF069906 DQ454534 DQ454674 DQ454797 DQ454818 GQ232799 DQ454530 DQ454764 Z30560 DQ454570 DQ454557 DQ454637 GU552723 GQ232831 Z30574 DQ454608 DQ454707 DQ454862 DQ454866 DQ454867 DQ454932 DQ523879 GQ232818 Z30544 Z30556 Z30563 Z30597 Z30672 DQ454537 DQ454600 Z30594 DQ454991 Z30548 DQ454533 DQ454966 DQ523863 DQ454575 DQ454591 DQ454675 DQ454975 DQ454989 HM116173 AY003860 DQ454688 EF091927 JF810280 EU099245 AY393163 EU099075 EU099102 AY393165 EU099215 AM183979 AY393166 AY393171 AY393177 AY393179 AY393180 AY393181 AY393183 AY393184 S74500 EU620003 AF103363 AF400158 AJ240597 JN110684 S74642 Z46847 FJ385345 FJ385356 FJ385426 GQ504882 AY062307 AF103159 AB274406 AB274412 AY422526 HM995333 L38895 Z92893 AY671484 AY671502 HM996309 DQ524158 DQ524152 AF398957 DQ523937 DQ523942 DQ523974 DQ523976 DQ524014 DQ524020 DQ524029 DQ524039 DQ524045 DQ524146 HM996397 AM233760 AM233767 AM233773 DQ926107 AF453266 AY376082 EF177971 HM995388 HM995482 HM995628 HM995630 HM995662 HM995740 HM995924 HM996182 HM996322 HM996354 HM996496 HM996514 HM996515 AB066901 AB066907 AB067286 AB067291 AB084084 AB453233 AF174055 AF174064 AF174066 AF174090 AF174108 AF174113 AF262203 AF262207 AJ244952 AJ244989 AJ245004 AJ245022 AJ245025 AJ245048 AJ245053 AJ245233 AJ245239 AJ245242 AJ389195 AJ556756 AJ556762 AJ576037 AJ579119 AJ579123 AJ579127 AJ579128 AJ579137 AJ579254 AJ579295 AJ579298 AJ579299 AY640493 AY640507 AY640551 AY670735 AY670737 AY670748 AY670776 AY670778 AY670786 AY670793 AY670807 AY670829 AY670832 AY670848 AY670852 AY670854 AY670861 AY670868 AY670869 AY670876 AY670877 AY670880 AY670887 AY670888 AY670889 AY670891 AY670901 AY670906 AY670908 AY670909 AY670917 AY670922 AY670927 AY670934 AY670936 AY670937 AY670938 AY670939 AY670941 AY670945 AY670955 AY670956 AY670957 AY670964 AY670968 AY670971 AY670979 AY670996 AY671042 AY671084 AY671098 AY671112 AY671127 AY671131 AY671137 AY671138 AY671237 AY671320 AY671325 AY671331 AY671336 AY671344 AY671367 AY671381 AY671385 AY671396 AY671397 AY671404 AY671405 AY671407 AY671408 AY671417 AY671437 AY671440 AY671442 AY671448 AY671463 AY671465 AY671467 AY671469 AY671493 AY671501 AY671506 AY671509 AY671516 AY671522 AY671524 AY671526 AY671542 AY671546 AY671547 AY671550 AY671554 AY671558 AY671559 AY671569 AY671571 AY671584 AY671588 AY671590 AY671594 AY671604 AY671607 AY671608 AY671609 AY671610 AY671611 AY671613 AY671615 AY671616 AY671621 AY671622 AY671628 AY671633 AY671636 AY671643 AY671646 AY671647 AY671649 AY671655 AY671657 AY671662 AY671667 AY671669 AY671679 AY671680 AY671683 AY671687 AY671695 AY671747 AY671768 AY671777 AY671778 AY685295 AY685305 AY685312 AY781854 AY781863 AY971061 AY971111 AY971119 DQ005266 DQ005272 DQ005280 DQ100845 DQ100896 DQ205163 DQ926078 FJ039782 FJ385308 FJ385314 FJ385395 GU570393 GU570394 HM152486 L12191 L12196 L25294 S55101 S67077 U85239 Z18320 Z70635 Z70659 AY686879 DQ535276 DQ535307 DQ535328 EF177962 FJ195498 FJ195512 HM996178 X67910 AY392946 AY392947 AY392948 AY392956 AY671265 AY671019 AY671039 AY671041 AY671259 AY671249 AY671147 AY671154 AY671178 AY671210 AY671260 AY671261 AF013620 AF062200 AF062203 AF062207 AF062220 AF062245 AF062258 AF062264 AF062272 AF174013 AF174036 AF381602 AF381610 AM233776 AM233818 AY670746 AY671066 AY671181 AY671188 AY671211 AY671693 AY671738 M26997 M99609 X52110 Z11958 Z47221 Z75400 Z75402 BC073766 J00231 BC063384 BC011857 CU680082 CU687682 Z14196 Z14194 TSC_hg19_v1_chr14_-_106478575 Z14182	12342	-	AF267814 AF267818 AY393025 M34025 DQ454568 FJ874017 FJ840306 FJ840308 FJ840341 FJ840342 FJ840347 FJ840348 FJ840351 FJ840353 FJ840354 FJ840356 FJ840361 FJ840364 FJ840365 FJ840368 FJ840373 FJ840378 FJ840401 FJ840402 FJ840404 FJ873822 FJ873825 FJ873827 FJ873829 FJ873831 FJ873832 FJ873834 FJ873841 FJ873843 FJ873845 FJ873851 FJ873852 FJ873854 FJ873856 FJ873879 FJ873880 FJ873882 FJ873889 FJ873891 FJ873893 FJ873896 FJ873900 FJ873905 FJ873906 FJ873907 FJ873908 FJ873917 FJ873919 FJ873920 FJ873927 FJ873937 FJ873944 FJ873960 FJ873973 FJ873980 FJ873983 FJ874001 FJ874004 FJ874006 FJ874007 FJ874011 FJ874012 FJ874016 FJ874021 FJ874022 FJ874032 FJ874033 FJ874035 FJ874041 FJ874060 FJ874071 FJ874092 HM116099 HM116103 HM116104 HM116108 HM116110 HM116111 HM116112 HM116124 HM116125 HM116126 HM116127 HM116132 HM116134 HM116142 HM116150 HM116151 HM116156 HM116157 HM116164 HM116171 HM116176 HM116183 HM116185 HM116186 HM116188 HM116194 HM116200 HM116203 HM116204 HM116207 HM116210 HM116211 HM116212 HM116215 HM116218 HM116224 GU552693 GQ232960 GQ232962 GQ232978 AJ008188 S75886 AJ487496 AY003819 AY994082 EU090242 EU667603 JF810259 AY393312 AY392883 AY392887 AY392891 AY392897 AY392900 AY392903 AY393023 AY393026 AY393027 AY393028 AY393029 AY393030 AY393031 AY393032 AY393033 AY393034 AY393035 AY393036 AY393037 AY393038 AY393040 AY393041 AY393042 AY393043 AY393044 AY393045 AY393046 AY393048 AY393049 AY393050 AY393051 AY393276 AY393277 AY393278 AY393283 AY393285 AY393288 AY393289 AY393290 AY393292 AY393294 AY393298 AY393299 AY393303 AY393304 AY393307 AY393310 AY393311 AY393382 AY393386 AY393390 AY393391 AY393392 AY393393 AY393406 AY393413 AY393416 AY393417 AY393418 AY393419 AY393421 AY393423 AY393435 AY393440 AY393452 AY393554 AY393555 AY393557 AY393558 AY393559 AY393564 AY393565 EU099064 EU099181 EU099246 DQ100785 JN110964 AY955064 JN110468 JN110515 JN110517 JN110539 JN110572 JN110594 JN110907 JN110984 JN110994 JN111158 JN111166 JN111205 AY062324 AM279571 AY866601 AY866658 AM279525 AM279573 AY866680 DQ100676 DQ100927 DQ100946 AM279595 AM279596 AM279599 AM279600 DQ100868 DQ926119 DQ926440 DQ926554 DQ926566 HM995527 HM995209 HM995210 HM995212 HM995214 HM995215 HM995376 HM995377 HM995380 HM995398 HM995401 HM995473 HM995528 HM995531 HM995597 HM995599 HM995814 HM995819 AB063834 AB066852 AB066861 AB066862 AB066864 AB066865 AB066866 AB066868 AB066869 AB066870 AB066871 AB066873 AB066874 AB066878 AB067185 AB067189 AB067221 AB067222 AB067223 AB067226 AB067228 AB067229 AB067231 AB067232 AB363096 AB363107 AB374193 AB374196 AB374197 AB374204 AF035018 AF062155 AF062255 AF129754 AF174046 AF174061 AF174070 AF174071 AF455551 AF460966 AY055482 AY345923 AY866550 AY866584 AY866603 AY866625 AY866961 AY941941 DQ205143 DQ490734 DQ490735 DQ490736 DQ923046 DQ926138 DQ926180 DQ926226 DQ926362 DQ926376 DQ926412 DQ926456 DQ926482 DQ926490 DQ926499 DQ926558 DQ926576 DQ926582 DQ926586 DQ926588 DQ926592 DQ926605 DQ926606 DQ926610 DQ926650 FR820874 GU570276 GU570278 GU570279 GU570280 HM152514 HQ378331 HQ378364 HQ378373 S73953 U00545 U00552 U00555 X64147 M90808 AY393141 AY393143 AY393144 AY393146 AY393147 AY393149 AY393150 X69861 AF062130 AF062268 AF062282 AY172958 S67984 X81695 Z47235 Z47237 Z47243 AK301335 TSC_hg19_v1_chr14_-_106494595 AK057617 BC092449	28371	-	AK129517|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC080557|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089412|IGHM|3507|immunoglobulin heavy constant mu##BC075840|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640724|IGHM|3507|immunoglobulin heavy constant mu##AK097348|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK126543|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640847|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073766|IGHV4-31|28396|immunoglobulin heavy variable 4-31##J00231|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC063384|IGHD|3495|immunoglobulin heavy constant delta##BC011857|IGHM|3507|immunoglobulin heavy constant mu##AK301335|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC092449|IGHA1|3493|immunoglobulin heavy constant alpha 1	3.529412	CTCF.p2:9:0.998	CTCF.p2:-48:0.557	CTCF.p2:68:0.927	CTCF.p2:-106:0.976
chr17	64711966	64712089	reg1013661.p2	9.135	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	-413100	+	TSC_hg19_v1_chr17_+_64298733 BC053321	-413277	+	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	-486502	-	AK290171 TSC_hg19_v1_chr17_+_64831234	119208	+	BC101633 NM_145811 BC101607 AF361351 AF458898	161393	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	248862	+	NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##BC053321|PRKCA|5578|protein kinase C, alpha##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	1.007827	CTCF.p2:-10:0.998
chr5	5141918	5142037	reg1013896.p1	9.135	+	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	-1466	+	AY335938 NM_024337	-1545810	+	AY249325 NM_178569 BC101608 BC101634 BC143638 BC143639 BC143640 BC171731	-2389676	+	TSC_hg19_v1_chr5_+_5422777 AK126937	280798	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	280932	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	1236673	-	AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AY335938|IRX1|79192|iroquois homeobox 1##NM_024337|IRX1|79192|iroquois homeobox 1##AY249325|C5orf38|153571|chromosome 5 open reading frame 38##NM_178569|C5orf38|153571|chromosome 5 open reading frame 38##BC101608|C5orf38|153571|chromosome 5 open reading frame 38##BC101634|C5orf38|153571|chromosome 5 open reading frame 38##BC143638|C5orf38|153571|chromosome 5 open reading frame 38##BC143639|C5orf38|153571|chromosome 5 open reading frame 38##BC143640|C5orf38|153571|chromosome 5 open reading frame 38##BC171731|C5orf38|153571|chromosome 5 open reading frame 38##AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10	1.056366	CTCF.p2:-4:0.999
chrX	103072566	103072674	reg1013039.p2	9.135	+	AK312340 TSC_hg19_v1_chrX_+_103031844 AK128782 AK295374 AK295388 M54927 M27110 BC095452	-40799	+	NM_000533 NM_199478 TSC_hg19_v1_chrX_+_103031767 BC002665	-40855	+	AK292728 NM_001128834	-41185	+	AK313425 TSC_hg19_v1_chrX_-_103087160 AB036693 BC041336 BC070069 BC018033 NM_016370	14556	-	TSC_hg19_v1_chrX_-_103174133 AK026512	101514	-	TSC_hg19_v1_chrX_+_103217225 BC093093 NM_194324 BC028039 BC054476 AK291479 BC029803 BC035660	144596	+	AK312340|PLP1|5354|proteolipid protein 1##AK128782|PLP1|5354|proteolipid protein 1##AK295374|PLP1|5354|proteolipid protein 1##AK295388|PLP1|5354|proteolipid protein 1##M54927|PLP1|5354|proteolipid protein 1##M27110|PLP1|5354|proteolipid protein 1##BC095452|PLP1|5354|proteolipid protein 1##NM_000533|PLP1|5354|proteolipid protein 1##NM_199478|PLP1|5354|proteolipid protein 1##BC002665|PLP1|5354|proteolipid protein 1##AK292728|PLP1|5354|proteolipid protein 1##NM_001128834|PLP1|5354|proteolipid protein 1##AK313425|RAB9B|51209|RAB9B, member RAS oncogene family##AB036693|RAB9B|51209|RAB9B, member RAS oncogene family##BC041336|RAB9B|51209|RAB9B, member RAS oncogene family##BC070069|RAB9B|51209|RAB9B, member RAS oncogene family##NM_016370|RAB9B|51209|RAB9B, member RAS oncogene family##AK026512|LOC100128594|100128594|uncharacterized LOC100128594##BC093093|TMSB15B|286527|thymosin beta 15B##NM_194324|TMSB15B|286527|thymosin beta 15B##BC054476|TMSB15B|286527|thymosin beta 15B##AK291479|TMSB15B|286527|thymosin beta 15B##BC029803|TMSB15B|286527|thymosin beta 15B##BC035660|TMSB15B|286527|thymosin beta 15B	0.993784	CTCF.p2:-11:0.994
chr1	95267666	95267771	reg1014930.p1	9.134	+	AF497569 AF497570 BT019808 CR541792 AB528376 AF487337 DQ892755 M16553 TSC_hg19_v1_chr1_-_95007316 M27436 J02931 AK312638 AK310918 AY940729 BC011029 NM_001178096 NM_001993	-260443	-	AK296791 TSC_hg19_v1_chr1_+_94883971 AK302714 AK308159 BC068509 BC009712 X58528 AB529219 CU679455 BT006644 M81182	-383717	+	TSC_hg19_v1_chr1_+_94883966 NM_001122674 NM_002858	-383770	+	NM_001114106 AK303906 TSC_hg19_v1_chr1_+_95285935 BC033858 AX721168 AK301288 AK316123 AK313574	18236	+	NM_152369 TSC_hg19_v1_chr1_+_95286156 BC053877	18424	+	TSC_hg19_v1_chr1_+_95286194 AK300193	18481	+	AF497569|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF497570|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BT019808|F3|2152|coagulation factor III (thromboplastin, tissue factor)##CR541792|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF487337|F3|2152|coagulation factor III (thromboplastin, tissue factor)##DQ892755|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M16553|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M27436|F3|2152|coagulation factor III (thromboplastin, tissue factor)##J02931|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK312638|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK310918|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AY940729|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BC011029|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001178096|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001993|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK296791|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK302714|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK308159|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC068509|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC009712|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##X58528|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BT006644|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##M81182|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_001122674|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_002858|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_001114106|SLC44A3|126969|solute carrier family 44, member 3##AK303906|SLC44A3|126969|solute carrier family 44, member 3##BC033858|SLC44A3|126969|solute carrier family 44, member 3##AK301288|SLC44A3|126969|solute carrier family 44, member 3##AK316123|SLC44A3|126969|solute carrier family 44, member 3##AK313574|SLC44A3|126969|solute carrier family 44, member 3##NM_152369|SLC44A3|126969|solute carrier family 44, member 3##BC053877|SLC44A3|126969|solute carrier family 44, member 3##AK300193|SLC44A3|126969|solute carrier family 44, member 3	0.805335	CTCF.p2:15:0.805
chr1	109186273	109186406	reg1016299.p1	9.133	+	BC127898 BC150530 NM_001010883 BC140863 BC140865	-83297	+	NM_001143987 NM_001143988 BC125161 BC125162	-193417	+	BC125161 BC125162 AK057395 AK316438 AK302318 NM_001143989	-399657	-	BC088366 TSC_hg19_v1_chr1_-_109203698 NM_001102592 BC012198	17429	-	TSC_hg19_v1_chr1_-_109204071 AK311542 AK310152 AK055087 NM_144584	17752	-	TSC_hg19_v1_chr1_+_109234948 NM_018061 BC040127 BC053838 BC034581 BC007757 BC024275 BC009453 BC016296 AL833950 AK001192 BC130346 BC132963 BC144243 BC107801 CU691032	48721	+	BC127898|FAM102B|284611|family with sequence similarity 102, member B##BC150530|FAM102B|284611|family with sequence similarity 102, member B##NM_001010883|FAM102B|284611|family with sequence similarity 102, member B##BC140863|FAM102B|284611|family with sequence similarity 102, member B##BC140865|FAM102B|284611|family with sequence similarity 102, member B##NM_001143987|NBPF6|653149|neuroblastoma breakpoint family, member 6##NM_001143988|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4##NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4##BC088366|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_001102592|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##BC012198|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK311542|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK310152|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK055087|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_144584|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_018061|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC040127|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC053838|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC034581|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC007757|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC024275|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC009453|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC016296|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##AL833950|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##AK001192|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC130346|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC132963|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC144243|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC107801|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	0.987634	CTCF.p2:15:0.988
chr12	110907030	110907180	reg1011729.p1	9.133	+	TSC_hg19_v1_chr12_+_110906672 CR457001 CU676792 DQ891800 DQ894984	-436	+	TSC_hg19_v1_chr12_+_110906585 AK309603 AK308802	-515	+	NM_001164372	-580	-	TSC_hg19_v1_chr12_-_110939917 BC015095 AF201946 AF175264 BC000880 AF168716 AF193795 AK129767 BC017964 AB578891 AB618733 AL136614 BC095446 NM_016226 NM_057180 BC032462 AB578892	32805	-	AK124109 NM_152442 AK301826 BC037353 AK302512 AY297459 BC068031 BC047645 AK097665	32970	+	TSC_hg19_v1_chr12_-_111020755 AY357944	113688	-	CR457001|C12orf24|29902|chromosome 12 open reading frame 24##DQ891800|C12orf24|29902|chromosome 12 open reading frame 24##DQ894984|C12orf24|29902|chromosome 12 open reading frame 24##AK309603|C12orf24|29902|chromosome 12 open reading frame 24##AK308802|C12orf24|29902|chromosome 12 open reading frame 24##NM_001164372|GPN3|51184|GPN-loop GTPase 3##BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578891|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB618733|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578892|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)##NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)##AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)##BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)##AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)##AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)##BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)##BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)##AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)##AY357944|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)	0.473891	CTCF.p2:6:0.456
chr5	129000193	129000300	reg1014910.p1	9.133	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-204193	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-569821	+	TSC_hg19_v1_chr5_+_128301169 BX537383 NM_014031 NM_001017372 AK313456 AL833117	-699049	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	240241	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	1500685	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	1500744	-	AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##BX537383|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_014031|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_001017372|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AK313456|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AL833117|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1	0.018916	
chr4	15651700	15651854	reg1013716.p2	9.132	+	TSC_hg19_v1_chr4_+_15480833 AB037766 BC103710	-170928	+	NM_001080522 NM_001164720 NM_020785 AK096047 AK309178 BX647334 BC061921 BC053865 BC070395 EU450799	-180203	+	NM_031911 AF329839	-222130	+	AF157323 AM392665 AM393475 CU688970 DQ892452 DQ895664 AF176700 AF199420 TSC_hg19_v1_chr4_-_15656935	5138	-	TSC_hg19_v1_chr4_-_15656965 AF142481 AK310860 BC012320	5177	-	TSC_hg19_v1_chr4_-_15656974 BX537957 BC030656 AK295510 NM_001193534 NM_001193535 NM_012161	5238	-	AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_001080522|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_001164720|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_020785|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AK096047|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AK309178|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BX647334|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC061921|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC053865|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC070395|CC2D2A|57545|coiled-coil and C2 domain containing 2A##EU450799|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AF157323|FBXL5|26234|F-box and leucine-rich repeat protein 5##AM392665|FBXL5|26234|F-box and leucine-rich repeat protein 5##AM393475|FBXL5|26234|F-box and leucine-rich repeat protein 5##DQ892452|FBXL5|26234|F-box and leucine-rich repeat protein 5##DQ895664|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF176700|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF199420|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF142481|FBXL5|26234|F-box and leucine-rich repeat protein 5##AK310860|FBXL5|26234|F-box and leucine-rich repeat protein 5##BC012320|FBXL5|26234|F-box and leucine-rich repeat protein 5##BX537957|FBXL5|26234|F-box and leucine-rich repeat protein 5##BC030656|FBXL5|26234|F-box and leucine-rich repeat protein 5##AK295510|FBXL5|26234|F-box and leucine-rich repeat protein 5##NM_001193534|FBXL5|26234|F-box and leucine-rich repeat protein 5##NM_001193535|FBXL5|26234|F-box and leucine-rich repeat protein 5##NM_012161|FBXL5|26234|F-box and leucine-rich repeat protein 5	0.971219	CTCF.p2:-8:0.971
chr4	88296987	88297112	reg1015069.p1	9.132	+	HQ258364 AY268355 BC112303 BC112305 AB073347 AK292784 AY186249 AY186250 NM_001136230 NM_178135 AY358575	-53024	-	BC041901 TSC_hg19_v1_chr4_-_88141661 BX640727 BX538173 NM_020803 CR749265 BX640744 BX647454 BC041384	-155387	-	TSC_hg19_v1_chr4_+_87968211 AF177238 AF177239	-328798	+	AB529195 CU690256 CU679009 AF273056 AY358553 TSC_hg19_v1_chr4_-_88312322 BC014327 BC021673	15222	-	TSC_hg19_v1_chr4_-_88312341 AK075348 BC008650 BC036001 BC016367 BC011995 NM_016245	15342	-	TSC_hg19_v1_chr4_+_88343781 NM_001248011 NM_024047 AK027295 AK074845 NM_198038 AF265341 AF273028 AK075408 AK308028 BC000542 AY359123 CU674266	46830	+	HQ258364|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY268355|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112303|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112305|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AB073347|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AK292784|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186249|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186250|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_001136230|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_178135|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY358575|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC041901|KLHL8|57563|kelch-like 8 (Drosophila)##BX640727|KLHL8|57563|kelch-like 8 (Drosophila)##BX538173|KLHL8|57563|kelch-like 8 (Drosophila)##NM_020803|KLHL8|57563|kelch-like 8 (Drosophila)##CR749265|KLHL8|57563|kelch-like 8 (Drosophila)##BX640744|KLHL8|57563|kelch-like 8 (Drosophila)##BX647454|KLHL8|57563|kelch-like 8 (Drosophila)##BC041384|KLHL8|57563|kelch-like 8 (Drosophila)##AF177238|AFF1|4299|AF4/FMR2 family, member 1##AF177239|AFF1|4299|AF4/FMR2 family, member 1##AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AK075348|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC008650|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC036001|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC016367|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC011995|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##NM_016245|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##NM_001248011|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	0.859034	CTCF.p2:-14:0.859
chr7	30780201	30780295	reg1013345.p1	9.132	+	AF361106 AF361107 Y10151 Y10152 Y10153 AF011406 NM_001202475 NM_001202481 AF361108	-40546	-	AK309519 TSC_hg19_v1_chr7_+_30737627	-42625	+	AK313661 NM_001202482 NM_001202483 NM_001883	-58128	-	TSC_hg19_v1_chr7_+_30791750 AF128846 AF128847 BC106902 BC106903 NM_001199219 NM_006774 AK308762 AK313832 AB590719 BC103712 BC033813	11508	+	TSC_hg19_v1_chr7_+_30811046 AK026027 NM_032222 AF538962 BC043210 BC098569	30788	+	NM_198098 TSC_hg19_v1_chr7_+_30951467 AK298091 AK298313 AK300995 AK304684 AK312656 AK301351 BC022486 M77829 S73482 U41517 DQ892366 DQ895575 CU692648 AB463415 AB451275 AB451402	171221	+	AF361106|CRHR2|1395|corticotropin releasing hormone receptor 2##AF361107|CRHR2|1395|corticotropin releasing hormone receptor 2##Y10151|CRHR2|1395|corticotropin releasing hormone receptor 2##Y10152|CRHR2|1395|corticotropin releasing hormone receptor 2##Y10153|CRHR2|1395|corticotropin releasing hormone receptor 2##AF011406|CRHR2|1395|corticotropin releasing hormone receptor 2##NM_001202475|CRHR2|1395|corticotropin releasing hormone receptor 2##NM_001202481|CRHR2|1395|corticotropin releasing hormone receptor 2##AF361108|CRHR2|1395|corticotropin releasing hormone receptor 2##AK309519|INMT|11185|indolethylamine N-methyltransferase##AK313661|CRHR2|1395|corticotropin releasing hormone receptor 2##NM_001202482|CRHR2|1395|corticotropin releasing hormone receptor 2##NM_001202483|CRHR2|1395|corticotropin releasing hormone receptor 2##NM_001883|CRHR2|1395|corticotropin releasing hormone receptor 2##AF128846|INMT|11185|indolethylamine N-methyltransferase##AF128847|INMT|11185|indolethylamine N-methyltransferase##BC106902|INMT|11185|indolethylamine N-methyltransferase##BC106903|INMT|11185|indolethylamine N-methyltransferase##NM_001199219|INMT|11185|indolethylamine N-methyltransferase##NM_006774|INMT|11185|indolethylamine N-methyltransferase##AK308762|INMT-FAM188B|100526825|INMT-FAM188B readthrough (non-protein coding)##AK313832|INMT|11185|indolethylamine N-methyltransferase##BC103712|INMT|11185|indolethylamine N-methyltransferase##BC033813|INMT|11185|indolethylamine N-methyltransferase##AK026027|FAM188B|84182|family with sequence similarity 188, member B##NM_032222|FAM188B|84182|family with sequence similarity 188, member B##AF538962|FAM188B|84182|family with sequence similarity 188, member B##BC043210|FAM188B|84182|family with sequence similarity 188, member B##BC098569|FAM188B|84182|family with sequence similarity 188, member B##NM_198098|AQP1|358|aquaporin 1 (Colton blood group)##AK298091|AQP1|358|aquaporin 1 (Colton blood group)##AK298313|AQP1|358|aquaporin 1 (Colton blood group)##AK300995|AQP1|358|aquaporin 1 (Colton blood group)##AK304684|AQP1|358|aquaporin 1 (Colton blood group)##AK312656|AQP1|358|aquaporin 1 (Colton blood group)##AK301351|AQP1|358|aquaporin 1 (Colton blood group)##BC022486|AQP1|358|aquaporin 1 (Colton blood group)##M77829|AQP1|358|aquaporin 1 (Colton blood group)##S73482|AQP1|358|aquaporin 1 (Colton blood group)##U41517|AQP1|358|aquaporin 1 (Colton blood group)##DQ892366|AQP1|358|aquaporin 1 (Colton blood group)##DQ895575|AQP1|358|aquaporin 1 (Colton blood group)##AB451275|AQP1|358|aquaporin 1 (Colton blood group)##AB451402|AQP1|358|aquaporin 1 (Colton blood group)	1.01911	CTCF.p2:0:1.000
chr17	34838946	34839073	reg1014071.p1	9.131	+	BC033670 BC047739 AK225985 AK302064 BC075809 AK292344 NM_001040282	-30947	-	BC047739 AL136860 AK301823 BC071680 AK225985 AK302064 NM_001123392	-81995	-	AY766447 AY766449 AY766450 AY766455 AY766456 BC070310 NM_001001435 NM_207007 BC071718 BC130456 BC130458 BC144393 BC144394 HQ258694	-198941	+	NM_004773 AF400652 BC105608 BC017931 AK290858 AK310022 AB464422 AK308583 L40410 TSC_hg19_v1_chr17_+_34842662	3558	+	TSC_hg19_v1_chr17_-_34890646 AK304073 BC008900 AK026518 AK299802	51714	-	TSC_hg19_v1_chr17_+_34890824 BC054025	51831	+	BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC075809|TBC1D3G|654341|TBC1 domain family, member 3G##AK292344|TBC1D3G|654341|TBC1 domain family, member 3G##NM_001040282|TBC1D3G|654341|TBC1 domain family, member 3G##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK302064|TBC1D3|729873|TBC1 domain family, member 3##NM_001123392|TBC1D3H|729877|TBC1 domain family, member 3H##AY766447|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766449|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766450|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766455|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC070310|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_001001435|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_207007|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##BC130456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC130458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144393|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144394|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##HQ258694|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##NM_004773|ZNHIT3|9326|zinc finger, HIT-type containing 3##AF400652|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC105608|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC017931|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK290858|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK310022|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK308583|ZNHIT3|9326|zinc finger, HIT-type containing 3##L40410|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK304073|MYO19|80179|myosin XIX##BC008900|MYO19|80179|myosin XIX##AK026518|MYO19|80179|myosin XIX##AK299802|MYO19|80179|myosin XIX	0.925205	CTCF.p2:0:0.925
chr5	131755465	131755590	reg1013644.p2	9.131	+	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-8899	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-50019	+	BX538252 TSC_hg19_v1_chr5_-_131705330	-50228	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	70954	-	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	123665	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	137113	+	AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BX538252|LOC553103|553103|uncharacterized LOC553103##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)	0.999433	CTCF.p2:-13:0.999
chr22	39518135	39518297	reg1012893.p1	9.130	+	NM_001166002 NM_001166003 NM_001166004 NM_181773 BC069023 CR456481	-24946	+	AK092614 NM_021822 AK315650 BC061914 AF182420 CR456472 BC009683 BC024268 AB266487 AB462950 CU013022 CU013310 CU692904 JF262036	-45029	+	AK294810 NM_001006666 NM_145298	-81576	+	TSC_hg19_v1_chr22_-_39529023 BC128418	10831	-	DQ064603 AB528611 EU446785 CU690844 BC051773 TSC_hg19_v1_chr22_-_39548584 NM_175709 AK124408	30351	-	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	118693	-	NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##AK092614|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_021822|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK315650|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC061914|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AF182420|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CR456472|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC009683|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC024268|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AB266487|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013022|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013310|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##JF262036|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK294810|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_001006666|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_145298|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##BC128418|CBX7|23492|chromobox homolog 7##DQ064603|CBX7|23492|chromobox homolog 7##EU446785|CBX7|23492|chromobox homolog 7##BC051773|CBX7|23492|chromobox homolog 7##NM_175709|CBX7|23492|chromobox homolog 7##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide	0.420627	CTCF.p2:-21:0.421
chr3	149248550	149248686	reg1014840.p1	9.130	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-56129	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-56216	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-153076	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	127117	-	AK022036 NM_001168278	172441	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	221621	-	AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2	0.023316	
chr4	166414603	166414717	reg1012346.p2	9.130	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-114503	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-165805	+	NM_001161521 NM_001161522 AK294103 BX647776	-283482	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	379794	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	1740951	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	1741044	-	X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.573818	CTCF.p2:-18:0.574
chr6	3887776	3887900	reg1011111.p1	9.130	+	BC001261 NM_012135 Y18503	-38212	+	NM_183373 TSC_hg19_v1_chr6_-_3752248	-135592	-	TSC_hg19_v1_chr6_-_3720312 BC031944	-167528	-	TSC_hg19_v1_chr6_+_4021647 BC034969 NM_003913 AK291244 AB011108 AF283465 AB385345 AY029347	133751	+	BC039349 NM_173563	191585	-	NM_001085401 BC047663 BC066986	191606	+	BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B##NM_183373|PXDC1|221749|PX domain containing 1##BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##BC039349|C6orf146|222826|chromosome 6 open reading frame 146##NM_173563|C6orf146|222826|chromosome 6 open reading frame 146##NM_001085401|C6orf201|404220|chromosome 6 open reading frame 201##BC047663|C6orf201|404220|chromosome 6 open reading frame 201##BC066986|C6orf201|404220|chromosome 6 open reading frame 201	0.996137	CTCF.p2:11:0.996
chr17	7961098	7961225	reg1016218.p1	9.129	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	-959	+	AK298095 NM_001039130 NM_001039131 NM_001141 AK292779 AK300554 BC063647 U78294 BC035217 BC033294 AB590334 DQ891345 EU176579 AF468051 AF468052 AF468053 AF468054	-18749	+	DQ426876 NM_000180 M92432	-55210	+	TSC_hg19_v1_chr17_+_7982776 AK096086 BC046191	21614	+	AF038461 NM_001139	29859	-	AJ269499 AK313677 NM_021628	60671	-	AK298095|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039130|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039131|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001141|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK292779|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK300554|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC063647|ALOX15B|247|arachidonate 15-lipoxygenase, type B##U78294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC035217|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC033294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##DQ891345|ALOX15B|247|arachidonate 15-lipoxygenase, type B##EU176579|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468051|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468052|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468053|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468054|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_000180|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##M92432|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##AF038461|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##NM_001139|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##AJ269499|ALOXE3|59344|arachidonate lipoxygenase 3##AK313677|ALOXE3|59344|arachidonate lipoxygenase 3##NM_021628|ALOXE3|59344|arachidonate lipoxygenase 3	0.325816	CTCF.p2:13:0.326
chr2	209040189	209040319	reg1014948.p1	9.129	+	EF426311 NM_014617 BC114456	-11928	-	BC074944 BC074945 BC117384 BC117388 NM_005210	-29378	-	AB590655 U66582 BC074954 BC074955 NM_020989	-45774	-	BC035737 NM_001099334	14518	-	AF113917 TSC_hg19_v1_chr2_-_209119796 BC021046 AL136702 BC093020 AF020038 NM_005896 AK302105 AK312242	79559	-	TSC_hg19_v1_chr2_+_209131009 AY457063 BC017736 BC032389 NM_001178000 NM_015040 NM_152671 BC125052 BC125053	90742	+	EF426311|CRYGA|1418|crystallin, gamma A##NM_014617|CRYGA|1418|crystallin, gamma A##BC114456|CRYGA|1418|crystallin, gamma A##BC074944|CRYGB|1419|crystallin, gamma B##BC074945|CRYGB|1419|crystallin, gamma B##BC117384|CRYGB|1419|crystallin, gamma B##BC117388|CRYGB|1419|crystallin, gamma B##NM_005210|CRYGB|1419|crystallin, gamma B##U66582|CRYGC|1420|crystallin, gamma C##BC074954|CRYGC|1420|crystallin, gamma C##BC074955|CRYGC|1420|crystallin, gamma C##NM_020989|CRYGC|1420|crystallin, gamma C##BC035737|C2orf80|389073|chromosome 2 open reading frame 80##NM_001099334|C2orf80|389073|chromosome 2 open reading frame 80##AF113917|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##BC021046|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AL136702|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##BC093020|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AF020038|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##NM_005896|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AK302105|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AK312242|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AY457063|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC017736|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC032389|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001178000|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_015040|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_152671|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC125052|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC125053|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	0.965483	CTCF.p2:-18:0.867
chr1	207752799	207752931	reg1014783.p1	9.128	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	-83287	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-125204	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-257760	+	NM_175710 BC109190 BC109191	65622	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	172528	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	172618	+	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein	0.976786	CTCF.p2:-19:0.977
chr4	186104909	186105028	reg1014772.p1	9.128	+	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	-40498	+	BC140795 BC144567 BC144568 BC144569 NM_001029887	-164930	+	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	-357734	-	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	20176	-	NM_031953	26315	+	AB037746 BC152444 NM_018409 AL161975	195193	-	NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC140795|HELT|391723|helt bHLH transcription factor##BC144567|HELT|391723|helt bHLH transcription factor##BC144569|HELT|391723|helt bHLH transcription factor##NM_001029887|HELT|391723|helt bHLH transcription factor##AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430##NM_031953|SNX25|83891|sorting nexin 25##AB037746|LRP2BP|55805|LRP2 binding protein##BC152444|LRP2BP|55805|LRP2 binding protein##NM_018409|LRP2BP|55805|LRP2 binding protein##AL161975|LRP2BP|55805|LRP2 binding protein	0.999499	CTCF.p2:5:0.999
chr6	37828145	37828291	reg1013969.p1	9.128	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	-40528	+	TSC_hg19_v1_chr6_+_37787274 NM_021943	-40928	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	-162512	-	BC101354 BC101355 BC101356 BC101357 AK057507 NM_001172418 NM_152733	735584	-	AB067467 TSC_hg19_v1_chr6_-_38607611	779387	-	TSC_hg19_v1_chr6_-_38607697 BX537534	779448	-	AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##BC101354|BTBD9|114781|BTB (POZ) domain containing 9##BC101355|BTBD9|114781|BTB (POZ) domain containing 9##BC101356|BTBD9|114781|BTB (POZ) domain containing 9##BC101357|BTBD9|114781|BTB (POZ) domain containing 9##AK057507|BTBD9|114781|BTB (POZ) domain containing 9##NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9##NM_152733|BTBD9|114781|BTB (POZ) domain containing 9##AB067467|BTBD9|114781|BTB (POZ) domain containing 9##BX537534|BTBD9|114781|BTB (POZ) domain containing 9	0.479605	CTCF.p2:-10:0.480
chr8	105338346	105338459	reg1009689.p2	9.128	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	-506827	+	AK126939 NM_001100117	-825427	+	TSC_hg19_v1_chr8_+_104427659 AK001874	-910737	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	13650	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	140813	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	262773	-	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK001874|DCAF13|25879|DDB1 and CUL4 associated factor 13##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12	0.942959	CTCF.p2:23:0.943
chr12	31004155	31004264	reg1011182.p1	9.127	+	AY074490 AY074491 NM_001002259 NM_001206856 NM_023925 NM_032156	-96762	-	TSC_hg19_v1_chr12_-_30848807 NM_006390	-155343	-	U77494 TSC_hg19_v1_chr12_-_30848794	-155439	-	TSC_hg19_v1_chr12_+_31079362 BC084571	75152	+	TSC_hg19_v1_chr12_+_31079681 AK293947	75451	+	AK300920 NM_001080509 TSC_hg19_v1_chr12_+_31079866 BC146917 BC146922	75655	+	AY074490|CAPRIN2|65981|caprin family member 2##AY074491|CAPRIN2|65981|caprin family member 2##NM_001002259|CAPRIN2|65981|caprin family member 2##NM_001206856|CAPRIN2|65981|caprin family member 2##NM_023925|CAPRIN2|65981|caprin family member 2##NM_032156|CAPRIN2|65981|caprin family member 2##NM_006390|IPO8|10526|importin 8##U77494|IPO8|10526|importin 8##AK293947|TSPAN11|441631|tetraspanin 11##AK300920|TSPAN11|441631|tetraspanin 11##NM_001080509|TSPAN11|441631|tetraspanin 11##BC146917|TSPAN11|441631|tetraspanin 11##BC146922|TSPAN11|441631|tetraspanin 11	0.694155	CTCF.p2:-4:0.694
chr15	75127697	75127842	reg1016478.p1	9.127	+	AK024055 NM_001030005 AB072900 BC018026 AY286501	-8779	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	-22597	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	-52913	+	TSC_hg19_v1_chr15_-_75135477 AB528889 CU691158 AK075047 BC056423 AK299380	7684	-	BC048289 TSC_hg19_v1_chr15_-_75135479	7710	-	TSC_hg19_v1_chr15_-_75135498 AK293181 BC036117	7731	-	AK024055|CPLX3|594855|complexin 3##NM_001030005|CPLX3|594855|complexin 3##AB072900|CPLX3|594855|complexin 3##BC018026|CPLX3|594855|complexin 3##AY286501|CPLX3|594855|complexin 3##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like##X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##AK075047|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC056423|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK299380|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC048289|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK293181|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC036117|ULK3|25989|unc-51-like kinase 3 (C. elegans)	0.591257	CTCF.p2:11:0.591
chr3	102255439	102255581	reg1014307.p2	9.127	+	AY090780 NM_175056 BC143817	-101643	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-687136	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-708550	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	2830070	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	2830312	+	CR749655 TSC_hg19_v1_chr3_-_105421064	3165544	-	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.018105	
chr9	65585747	65585875	reg1015867.p1	9.127	+	BC040528 NM_001113541 NM_015667	-76202	-	TSC_hg19_v1_chr9_+_45441926 BC006438	-20143885	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-21900968	+	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	871490	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	872685	-	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	908385	-	BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##AB593083|LOC100132249|100132249|uncharacterized LOC100132249	0.969308	CTCF.p2:-3:0.969
chr22	23744984	23745077	reg1011906.p1	9.126	+	TSC_hg19_v1_chr22_-_23744738 AK056130 AK092581 AX747609 AK092530 AX747585	-287	-	TSC_hg19_v1_chr22_+_23540316 X14677 X14675	-204625	+	TSC_hg19_v1_chr22_+_23523013 X06418 EU216058 EU216059 EU216061 EU216062 EU216063 EU216064 EU216065 EU216067 EU216068 EU216069 EU216070 EU216072	-221981	+	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	177405	-	BC056888 AL080197 BC063390 AK310349 NM_016449	229466	-	AY101396 NM_153615	288017	+	AK056130|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092581|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092530|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##X06418|BCR|613|breakpoint cluster region##EU216058|BCR|613|breakpoint cluster region##EU216059|BCR|613|breakpoint cluster region##EU216061|BCR|613|breakpoint cluster region##EU216062|BCR|613|breakpoint cluster region##EU216063|BCR|613|breakpoint cluster region##EU216064|BCR|613|breakpoint cluster region##EU216067|BCR|613|breakpoint cluster region##EU216069|BCR|613|breakpoint cluster region##EU216070|BCR|613|breakpoint cluster region##DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43##AY101396|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4##NM_153615|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4	0.321755	CTCF.p2:35:0.263
chr12	49437704	49437808	reg1013403.p1	9.125	+	TSC_hg19_v1_chr12_-_49412538 AK293332 NM_001206710 AK303276 AK307994 AK310250 BC000358 AK097606 NM_001206709 NM_002733	-25185	-	AB527129 AB018292 BC136398 BC136399 TSC_hg19_v1_chr12_-_49393076 NM_015086 BC039264	-44756	-	NM_005430	-65521	+	AF010403 NM_003482	11350	-	BC014155 BC027482 NM_144593 AK098663 AY509932 AY327412	26012	-	AK313360 BC033507 HQ607677 HQ607678 NM_021044	50829	-	AK293332|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206710|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK303276|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK307994|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK310250|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##BC000358|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK097606|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206709|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_002733|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AB018292|DDN|23109|dendrin##BC136398|DDN|23109|dendrin##BC136399|DDN|23109|dendrin##NM_015086|DDN|23109|dendrin##BC039264|DDN|23109|dendrin##NM_005430|WNT1|7471|wingless-type MMTV integration site family, member 1##AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##BC014155|RHEBL1|121268|Ras homolog enriched in brain like 1##BC027482|RHEBL1|121268|Ras homolog enriched in brain like 1##NM_144593|RHEBL1|121268|Ras homolog enriched in brain like 1##AK098663|RHEBL1|121268|Ras homolog enriched in brain like 1##AY509932|RHEBL1|121268|Ras homolog enriched in brain like 1##AY327412|RHEBL1|121268|Ras homolog enriched in brain like 1##AK313360|DHH|50846|desert hedgehog##BC033507|DHH|50846|desert hedgehog##HQ607677|DHH|50846|desert hedgehog##HQ607678|DHH|50846|desert hedgehog##NM_021044|DHH|50846|desert hedgehog	0.995088	CTCF.p2:2:0.995
chr5	133468129	133468264	reg1012178.p1	9.125	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	-16835	+	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	-17677	+	AK095989 NM_003374	-127373	-	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	44427	-	TSC_hg19_v1_chr5_-_133512642 Z47087 BC020798 NM_006930 NM_170679	44486	-	AB451240 AB451365 CR457417 AB385080 X12646 TSC_hg19_v1_chr5_-_133561733 J03804	93448	-	NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1##Z47087|SKP1|6500|S-phase kinase-associated protein 1##BC020798|SKP1|6500|S-phase kinase-associated protein 1##NM_006930|SKP1|6500|S-phase kinase-associated protein 1##NM_170679|SKP1|6500|S-phase kinase-associated protein 1##AB451240|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AB451365|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##CR457417|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##X12646|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##J03804|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme	0.018758	
chr9	124312884	124312986	reg1011903.p1	9.125	+	AF378121 AF378122 AF378123 TSC_hg19_v1_chr9_-_124262101 BC045756	-50846	-	BC010703 TSC_hg19_v1_chr9_-_124132529 AK307999 AK304449 AK304518 AK302977 NM_004099 NM_198194	-180393	-	CR542100 X60067 AB528375 DQ891058 DQ894236 CU679799 TSC_hg19_v1_chr9_-_124132480 M81635	-180460	-	NM_032552	16463	+	TSC_hg19_v1_chr9_+_124461442 AF367051	148571	+	AY032952 NM_138709	192128	+	AF378121|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378122|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378123|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC045756|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC010703|STOM|2040|stomatin##AK307999|STOM|2040|stomatin##AK304449|STOM|2040|stomatin##AK304518|STOM|2040|stomatin##AK302977|STOM|2040|stomatin##NM_004099|STOM|2040|stomatin##NM_198194|STOM|2040|stomatin##CR542100|STOM|2040|stomatin##X60067|STOM|2040|stomatin##DQ891058|STOM|2040|stomatin##DQ894236|STOM|2040|stomatin##M81635|STOM|2040|stomatin##NM_032552|DAB2IP|153090|DAB2 interacting protein##AF367051|DAB2IP|153090|DAB2 interacting protein##AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein	0.237801	CTCF.p2:-1:0.212
chr4	113774950	113775080	reg1014108.p1	9.124	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-35714	+	NM_015454 TSC_hg19_v1_chr4_+_113558677	-216347	+	TSC_hg19_v1_chr4_-_113558120 AK302613 AK299831 NM_018392	-216880	-	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	195819	+	TSC_hg19_v1_chr4_+_114214102 AK294720	439104	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	907266	-	AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7##AK302613|C4orf21|55345|chromosome 4 open reading frame 21##AK299831|C4orf21|55345|chromosome 4 open reading frame 21##NM_018392|C4orf21|55345|chromosome 4 open reading frame 21##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK294720|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.692826	CTCF.p2:0:0.693
chr18	64163229	64163334	reg1013757.p1	9.123	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-745079	+	TSC_hg19_v1_chr18_+_63417845 BC036786	-745415	+	AJ007611 NM_033646	-745794	+	AJ007607 NM_021153 AK304000 AK315257 BC015877	108030	-	AK021849 TSC_hg19_v1_chr18_-_65182656	1019302	-	TSC_hg19_v1_chr18_-_65183956 NM_032160	1020665	-	AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AK021849|DSEL|92126|dermatan sulfate epimerase-like##NM_032160|DSEL|92126|dermatan sulfate epimerase-like	0.697413	CTCF.p2:14:0.697
chr7	157132931	157133058	reg1013487.p2	9.123	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	-3283	+	TSC_hg19_v1_chr7_+_157023934 AK098447	-108988	+	D13635 TSC_hg19_v1_chr7_+_156931668 BC014029	-201311	+	TSC_hg19_v1_chr7_+_157647233 BC034557	514280	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	1247459	-	BC028618 TSC_hg19_v1_chr7_-_158497496 AK092008 AX747307 BC043404 BX537845 NM_017760	1364483	-	AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##D13635|UBE3C|9690|ubiquitin protein ligase E3C##BC014029|UBE3C|9690|ubiquitin protein ligase E3C##BC034557|LOC100506585|100506585|uncharacterized LOC100506585##DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC028618|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK092008|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BC043404|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BX537845|NCAPG2|54892|non-SMC condensin II complex, subunit G2##NM_017760|NCAPG2|54892|non-SMC condensin II complex, subunit G2	0.334775	CTCF.p2:-4:0.335
chr8	106730360	106730480	reg1015593.p1	9.123	+	AF119334 BC109222 BC109223 NM_012082	-399274	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-1129173	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-1129245	-	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	552003	+	AK296561 NM_001198532	729731	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	939568	+	AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1	0.997743	CTCF.p2:13:0.998
chr1	154158680	154158816	reg1016968.p1	9.122	+	TSC_hg19_v1_chr1_-_154155705 AK298678 NM_001043351 NM_001043352 NM_001043353 NM_153649	-3037	-	TSC_hg19_v1_chr1_-_154155685 AK308007	-3058	-	TSC_hg19_v1_chr1_-_154155683 AK301674 AK315504 BX648485	-3066	-	X04201 TSC_hg19_v1_chr1_-_154164580 BC062740 AK092690 AX747672 BC008407 BC008425 AK056997 NM_152263	5831	-	HQ258701 NM_001010979 BC127710 BC130509	20092	-	D63478 NM_001127320	33906	+	AK298678|TPM3|7170|tropomyosin 3##NM_001043351|TPM3|7170|tropomyosin 3##NM_001043352|TPM3|7170|tropomyosin 3##NM_001043353|TPM3|7170|tropomyosin 3##NM_153649|TPM3|7170|tropomyosin 3##AK308007|TPM3|7170|tropomyosin 3##AK301674|TPM3|7170|tropomyosin 3##AK315504|TPM3|7170|tropomyosin 3##BX648485|TPM3|7170|tropomyosin 3##X04201|TPM3|7170|tropomyosin 3##BC062740|TPM3|7170|tropomyosin 3##AK092690|TPM3|7170|tropomyosin 3##BC008407|TPM3|7170|tropomyosin 3##BC008425|TPM3|7170|tropomyosin 3##AK056997|TPM3|7170|tropomyosin 3##NM_152263|TPM3|7170|tropomyosin 3##HQ258701|C1orf189|388701|chromosome 1 open reading frame 189##NM_001010979|C1orf189|388701|chromosome 1 open reading frame 189##BC127710|C1orf189|388701|chromosome 1 open reading frame 189##BC130509|C1orf189|388701|chromosome 1 open reading frame 189##D63478|UBAP2L|9898|ubiquitin associated protein 2-like##NM_001127320|UBAP2L|9898|ubiquitin associated protein 2-like	0.990807	CTCF.p2:-2:0.991
chr3	98517827	98517925	reg1010922.p1	9.122	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-66289	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-66631	+	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	-205457	-	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	102616	-	AK311449 NM_001850 NM_020351 AF170702 BC013581	839574	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	1018869	+	AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26	0.022337	
chr8	37782169	37782296	reg1014516.p1	9.122	+	AY280968 DQ083995 AF368294 DQ236342 BC077720 BC054881 TSC_hg19_v1_chr8_-_37757016 AK291781 AK026275 NM_001002814 NM_025151	-25231	-	TSC_hg19_v1_chr8_-_37727937 AK026177	-54282	-	NM_018310 TSC_hg19_v1_chr8_-_37707430 AK294337	-74788	-	BC029504 NM_152413	15414	-	S53291 TSC_hg19_v1_chr8_-_37822825	40587	-	AY487247 FJ170286 FJ170287 BC075017 AK313857 X70811 AK309919 AK293033 NM_000025	41852	-	AY280968|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ083995|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AF368294|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ236342|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC077720|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC054881|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK291781|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK026275|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_001002814|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_025151|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK026177|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_018310|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK294337|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##BC029504|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##NM_152413|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##S53291|ADRB3|155|adrenergic, beta-3-, receptor##AY487247|ADRB3|155|adrenergic, beta-3-, receptor##FJ170286|ADRB3|155|adrenergic, beta-3-, receptor##FJ170287|ADRB3|155|adrenergic, beta-3-, receptor##BC075017|ADRB3|155|adrenergic, beta-3-, receptor##AK313857|ADRB3|155|adrenergic, beta-3-, receptor##X70811|ADRB3|155|adrenergic, beta-3-, receptor##AK309919|ADRB3|155|adrenergic, beta-3-, receptor##AK293033|ADRB3|155|adrenergic, beta-3-, receptor##NM_000025|ADRB3|155|adrenergic, beta-3-, receptor	0.804568	CTCF.p2:14:0.805
chrX	154069279	154069398	reg1014632.p1	9.122	+	NM_001162936	-6402	-	TSC_hg19_v1_chrX_-_154033761 AK311541 M64925 AK310681 AK304538 AK223396 NM_001166460 NM_001166461 NM_001166462 NM_002436	-35566	-	AK290246 TSC_hg19_v1_chrX_-_154033701	-35632	-	BC130510 BC130512 AF254576 NM_001017990 NM_080720 BC134365 HQ258044 BC101415 BC101417 BC101418 BC128034 CR542230	43948	+	CU692668 AK313707 BC111967 BC111969 M90707 BC022513 AK289947 BC064380 BC098389 NM_019863	45165	-	TSC_hg19_v1_chrX_+_154114626 NM_012151 BC071963 AB462986 AM393473 AM393736 BC039693 DQ896667 NM_001007523 NM_001007524	45291	+	NM_001162936|CXorf68|100132963|chromosome X open reading frame 68##AK311541|MPP1|4354|membrane protein, palmitoylated 1, 55kDa##M64925|MPP1|4354|membrane protein, palmitoylated 1, 55kDa##AK310681|MPP1|4354|membrane protein, palmitoylated 1, 55kDa##AK304538|MPP1|4354|membrane protein, palmitoylated 1, 55kDa##AK223396|MPP1|4354|membrane protein, palmitoylated 1, 55kDa##NM_001166460|MPP1|4354|membrane protein, palmitoylated 1, 55kDa##NM_001166461|MPP1|4354|membrane protein, palmitoylated 1, 55kDa##NM_001166462|MPP1|4354|membrane protein, palmitoylated 1, 55kDa##NM_002436|MPP1|4354|membrane protein, palmitoylated 1, 55kDa##AK290246|MPP1|4354|membrane protein, palmitoylated 1, 55kDa##BC130510|H2AFB3|83740|H2A histone family, member B3##BC130512|H2AFB3|83740|H2A histone family, member B3##AF254576|H2AFB3|83740|H2A histone family, member B3##NM_001017990|H2AFB1|474382|H2A histone family, member B1##NM_080720|H2AFB3|83740|H2A histone family, member B3##BC134365|H2AFB2|474381|H2A histone family, member B2##HQ258044|H2AFB3|83740|H2A histone family, member B3##BC101415|H2AFB3|83740|H2A histone family, member B3##BC101417|H2AFB3|83740|H2A histone family, member B3##BC101418|H2AFB3|83740|H2A histone family, member B3##BC128034|H2AFB1|474382|H2A histone family, member B1##CR542230|H2AFB1|474382|H2A histone family, member B1##AK313707|F8|2157|coagulation factor VIII, procoagulant component##BC111967|F8|2157|coagulation factor VIII, procoagulant component##BC111969|F8|2157|coagulation factor VIII, procoagulant component##M90707|F8|2157|coagulation factor VIII, procoagulant component##BC022513|F8|2157|coagulation factor VIII, procoagulant component##AK289947|F8|2157|coagulation factor VIII, procoagulant component##BC064380|F8|2157|coagulation factor VIII, procoagulant component##BC098389|F8|2157|coagulation factor VIII, procoagulant component##NM_019863|F8|2157|coagulation factor VIII, procoagulant component##NM_012151|F8A1|8263|coagulation factor VIII-associated 1##BC071963|F8A1|8263|coagulation factor VIII-associated 1##AM393473|F8A1|8263|coagulation factor VIII-associated 1##AM393736|F8A1|8263|coagulation factor VIII-associated 1##BC039693|F8A1|8263|coagulation factor VIII-associated 1##DQ896667|F8A1|8263|coagulation factor VIII-associated 1##NM_001007523|F8A2|474383|coagulation factor VIII-associated 2##NM_001007524|F8A3|474384|coagulation factor VIII-associated 3	0.806177	CTCF.p2:21:0.806
chr1	94979808	94979923	reg1014152.p1	9.121	+	AK296791 TSC_hg19_v1_chr1_+_94883971 AK302714 AK308159 BC068509 BC009712 X58528 AB529219 CU679455 BT006644 M81182	-95864	+	TSC_hg19_v1_chr1_+_94883966 NM_001122674 NM_002858	-95917	+	TSC_hg19_v1_chr1_-_94703252 BC067839 NM_004815	-276586	-	AF497569 AF497570 BT019808 CR541792 AB528376 AF487337 DQ892755 M16553 TSC_hg19_v1_chr1_-_95007316 M27436 J02931 AK312638 AK310918 AY940729 BC011029 NM_001178096 NM_001993	27410	-	NM_001114106 AK303906 TSC_hg19_v1_chr1_+_95285935 BC033858 AX721168 AK301288 AK316123 AK313574	306089	+	NM_152369 TSC_hg19_v1_chr1_+_95286156 BC053877	306277	+	AK296791|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK302714|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK308159|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC068509|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC009712|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##X58528|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BT006644|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##M81182|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_001122674|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_002858|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC067839|ARHGAP29|9411|Rho GTPase activating protein 29##NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29##AF497569|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF497570|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BT019808|F3|2152|coagulation factor III (thromboplastin, tissue factor)##CR541792|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF487337|F3|2152|coagulation factor III (thromboplastin, tissue factor)##DQ892755|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M16553|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M27436|F3|2152|coagulation factor III (thromboplastin, tissue factor)##J02931|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK312638|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK310918|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AY940729|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BC011029|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001178096|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001993|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001114106|SLC44A3|126969|solute carrier family 44, member 3##AK303906|SLC44A3|126969|solute carrier family 44, member 3##BC033858|SLC44A3|126969|solute carrier family 44, member 3##AK301288|SLC44A3|126969|solute carrier family 44, member 3##AK316123|SLC44A3|126969|solute carrier family 44, member 3##AK313574|SLC44A3|126969|solute carrier family 44, member 3##NM_152369|SLC44A3|126969|solute carrier family 44, member 3##BC053877|SLC44A3|126969|solute carrier family 44, member 3	0.866015	CTCF.p2:-10:0.866
chr3	123442547	123442649	reg1012788.p2	9.121	+	TSC_hg19_v1_chr3_-_123411207 AK300610	-31381	-	TSC_hg19_v1_chr3_-_123339426 NM_053031 NM_053032	-103122	-	BC113458 BC113456 BC100761 BC100762 BC100763 AF096773 AF096774 AF096775 AK314412 TSC_hg19_v1_chr3_-_123339352 BC017811 BC107783 Y09530 BC064420 AK314443	-103314	-	TSC_hg19_v1_chr3_-_123603158 BC064695 NM_053025 NM_053026 NM_053027 NM_053028	160573	-	TSC_hg19_v1_chr3_-_123680077 AK123060 AK307847 AK294979 BC040285	237488	-	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	237657	-	AK300610|MYLK|4638|myosin light chain kinase##NM_053031|MYLK|4638|myosin light chain kinase##NM_053032|MYLK|4638|myosin light chain kinase##BC113458|MYLK|4638|myosin light chain kinase##BC113456|MYLK|4638|myosin light chain kinase##BC100761|MYLK|4638|myosin light chain kinase##BC100762|MYLK|4638|myosin light chain kinase##BC100763|MYLK|4638|myosin light chain kinase##AF096773|MYLK|4638|myosin light chain kinase##AF096774|MYLK|4638|myosin light chain kinase##AF096775|MYLK|4638|myosin light chain kinase##AK314412|MYLK|4638|myosin light chain kinase##BC017811|MYLK|4638|myosin light chain kinase##BC107783|MYLK|4638|myosin light chain kinase##Y09530|MYLK|4638|myosin light chain kinase##BC064420|MYLK|4638|myosin light chain kinase##AK314443|MYLK|4638|myosin light chain kinase##BC064695|MYLK|4638|myosin light chain kinase##NM_053025|MYLK|4638|myosin light chain kinase##NM_053026|MYLK|4638|myosin light chain kinase##NM_053027|MYLK|4638|myosin light chain kinase##NM_053028|MYLK|4638|myosin light chain kinase##AK123060|CCDC14|64770|coiled-coil domain containing 14##AK307847|CCDC14|64770|coiled-coil domain containing 14##AK294979|CCDC14|64770|coiled-coil domain containing 14##BC040285|CCDC14|64770|coiled-coil domain containing 14##AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14	0.951618	CTCF.p2:-2:0.952
chr3	5163782	5163943	reg1014951.p1	9.121	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-142508	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	-142681	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	-142746	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	93	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	229	+	TSC_hg19_v1_chr3_+_5229344 AK298511	65465	+	AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	1.032442	CTCF.p2:10:0.996
chr10	103227190	103227307	reg1013736.p1	9.120	+	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	-113376	+	BC136321 BC069156 NM_006562 X90828	-238546	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-336070	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	120681	-	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	120761	-	TSC_hg19_v1_chr10_+_103348081 BC031695 BC001082 NM_015448 AK290154 AB527777 EU832466 EU832547 AY532267	120822	+	NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda##BC031695|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##BC001082|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##NM_015448|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AK290154|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832466|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832547|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AY532267|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)	0.894162	CTCF.p2:-2:0.894
chr11	104022239	104022365	reg1015152.p1	9.120	+	NM_001001711 AF429971 AK093336 AX748060 BC022018 BC022017 BC021710 BC021172	-114964	+	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	-1042103	+	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	-1059379	-	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	12492	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	12738	-	TSC_hg19_v1_chr11_-_104035100 BC030645	12798	-	NM_001001711|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AF429971|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK093336|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022018|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022017|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021710|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021172|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D##BC030645|PDGFD|80310|platelet derived growth factor D	0.993286	CTCF.p2:9:0.993
chr3	176656911	176657043	reg1013175.p2	9.120	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	-2079887	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	-2498257	+	BC032555 NM_014932	-3540734	+	TSC_hg19_v1_chr3_-_176914267 BX648935	257273	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	257974	-	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	258082	-	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.988481	CTCF.p2:8:0.988
chr10	98100179	98100301	reg1014026.p1	9.119	+	NM_001017520 NM_004088 AB046378 AK313615 M26144 BC012920 AK223317 DQ891465 DQ894645	-36072	+	AM180327 AM180328 AM180329 AM180330 AM180331 AM180332 AM180333 AM180334 AM180335 AM180336 AM180337 AM180338 AM180339 AM180340 AM180341 AM180342 AM180343 AM180344 AM180345 AM180346 BC018906 BC110298 AK027779 AF068180 AF068181 AK225546 NM_001114094 NM_013314	-68997	-	BC109045 BC109046 TSC_hg19_v1_chr10_+_97889812 AK095317 BC030967	-210498	+	AF367761 NM_001040102 NM_001040103 NM_033207	18834	-	AB384048 BC113577 BC112341 BC112366 AB023149 BC013871 BC030548 TSC_hg19_v1_chr10_-_98273674 AK026106 NM_012465	173323	-	AK075451 TSC_hg19_v1_chr10_-_98290333	190097	-	NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal##NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal##AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal##AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal##M26144|DNTT|1791|deoxynucleotidyltransferase, terminal##BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal##AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal##AM180327|BLNK|29760|B-cell linker##AM180328|BLNK|29760|B-cell linker##AM180329|BLNK|29760|B-cell linker##AM180330|BLNK|29760|B-cell linker##AM180331|BLNK|29760|B-cell linker##AM180332|BLNK|29760|B-cell linker##AM180333|BLNK|29760|B-cell linker##AM180334|BLNK|29760|B-cell linker##AM180335|BLNK|29760|B-cell linker##AM180336|BLNK|29760|B-cell linker##AM180337|BLNK|29760|B-cell linker##AM180338|BLNK|29760|B-cell linker##AM180339|BLNK|29760|B-cell linker##AM180340|BLNK|29760|B-cell linker##AM180341|BLNK|29760|B-cell linker##AM180342|BLNK|29760|B-cell linker##AM180343|BLNK|29760|B-cell linker##AM180344|BLNK|29760|B-cell linker##AM180345|BLNK|29760|B-cell linker##AM180346|BLNK|29760|B-cell linker##BC018906|BLNK|29760|B-cell linker##BC110298|BLNK|29760|B-cell linker##AK027779|BLNK|29760|B-cell linker##AF068180|BLNK|29760|B-cell linker##AF068181|BLNK|29760|B-cell linker##AK225546|BLNK|29760|B-cell linker##NM_001114094|BLNK|29760|B-cell linker##NM_013314|BLNK|29760|B-cell linker##BC109045|ZNF518A|9849|zinc finger protein 518A##BC109046|ZNF518A|9849|zinc finger protein 518A##BC030967|ZNF518A|9849|zinc finger protein 518A##AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##BC113577|TLL2|7093|tolloid-like 2##BC112341|TLL2|7093|tolloid-like 2##BC112366|TLL2|7093|tolloid-like 2##AB023149|TLL2|7093|tolloid-like 2##BC013871|TLL2|7093|tolloid-like 2##BC030548|TLL2|7093|tolloid-like 2##AK026106|TLL2|7093|tolloid-like 2##NM_012465|TLL2|7093|tolloid-like 2##AK075451|TM9SF3|56889|transmembrane 9 superfamily member 3	0.930515	CTCF.p2:5:0.931
chr17	44913373	44913490	reg1014037.p1	9.119	+	AB464356 AB067628 BC114219 BC112116 BC112118 AY009397 NM_030753	-17410	-	NM_006178 AF135168 AF102846 AK294001 AK294727 AK294886 AK299786 BC030613 AK226078 AK290204 AK316057 U03985	-245354	+	BC020869 AB209344 AF208864 BX647266 NM_001113738 NM_016632	-256384	-	AY358217 AK127615 AB063483 NM_003396 BC064534 AB590853	15543	+	TSC_hg19_v1_chr17_+_45000492 NM_001012511 NM_004287 NM_054022	87056	+	TSC_hg19_v1_chr17_+_45000525 AK303650 AK290890 BC009710 AF229796 BC034762 CU679451 AF007548 DQ891461 DQ894638	87114	+	AB067628|WNT3|7473|wingless-type MMTV integration site family, member 3##BC114219|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112116|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112118|WNT3|7473|wingless-type MMTV integration site family, member 3##AY009397|WNT3|7473|wingless-type MMTV integration site family, member 3##NM_030753|WNT3|7473|wingless-type MMTV integration site family, member 3##NM_006178|NSF|4905|N-ethylmaleimide-sensitive factor##AF135168|NSF|4905|N-ethylmaleimide-sensitive factor##AF102846|NSF|4905|N-ethylmaleimide-sensitive factor##AK294001|NSF|4905|N-ethylmaleimide-sensitive factor##AK294727|NSF|4905|N-ethylmaleimide-sensitive factor##AK294886|NSF|4905|N-ethylmaleimide-sensitive factor##AK299786|NSF|4905|N-ethylmaleimide-sensitive factor##BC030613|NSF|4905|N-ethylmaleimide-sensitive factor##AK226078|NSF|4905|N-ethylmaleimide-sensitive factor##AK290204|NSF|4905|N-ethylmaleimide-sensitive factor##AK316057|NSF|4905|N-ethylmaleimide-sensitive factor##U03985|NSF|4905|N-ethylmaleimide-sensitive factor##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AB209344|ARL17A|51326|ADP-ribosylation factor-like 17A##AF208864|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A##AY358217|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AK127615|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AB063483|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_003396|WNT9B|7484|wingless-type MMTV integration site family, member 9B##BC064534|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_001012511|GOSR2|9570|golgi SNAP receptor complex member 2##NM_004287|GOSR2|9570|golgi SNAP receptor complex member 2##NM_054022|GOSR2|9570|golgi SNAP receptor complex member 2##AK290890|GOSR2|9570|golgi SNAP receptor complex member 2##BC009710|GOSR2|9570|golgi SNAP receptor complex member 2##AF229796|GOSR2|9570|golgi SNAP receptor complex member 2##BC034762|GOSR2|9570|golgi SNAP receptor complex member 2##AF007548|GOSR2|9570|golgi SNAP receptor complex member 2##DQ891461|GOSR2|9570|golgi SNAP receptor complex member 2##DQ894638|GOSR2|9570|golgi SNAP receptor complex member 2	0.996015	CTCF.p2:-9:0.996
chr5	133090390	133090501	reg1013621.p1	9.119	+	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	-142207	-	TSC_hg19_v1_chr5_-_132948202 AK055684	-142246	-	TSC_hg19_v1_chr5_+_132432890 AK315862	-657554	+	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	213930	-	TSC_hg19_v1_chr5_-_133340377 BC008482	249922	-	TSC_hg19_v1_chr5_-_133340386 BC090042	249938	-	NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##AK055684|FSTL4|23105|follistatin-like 4##AK315862|HSPA4|3308|heat shock 70kDa protein 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15##BC008482|VDAC1|7416|voltage-dependent anion channel 1##BC090042|VDAC1|7416|voltage-dependent anion channel 1	0.988438	CTCF.p2:-9:0.988
chr12	117146831	117146952	reg1015216.p1	9.118	+	NM_001085481	-149706	+	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	-175662	+	TSC_hg19_v1_chr12_-_116715263 AY338463	-431731	-	TSC_hg19_v1_chr12_-_117175822 AK309652 BC019843 AK025068 NM_024738	28847	-	TSC_hg19_v1_chr12_-_117175868 AK222983 AK298857	28978	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	29228	+	NM_001085481|MAP1LC3B2|643246|microtubule-associated protein 1 light chain 3 beta 2##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173##AY338463|MED13L|23389|mediator complex subunit 13-like##AK309652|C12orf49|79794|chromosome 12 open reading frame 49##BC019843|C12orf49|79794|chromosome 12 open reading frame 49##AK025068|C12orf49|79794|chromosome 12 open reading frame 49##NM_024738|C12orf49|79794|chromosome 12 open reading frame 49##AK222983|C12orf49|79794|chromosome 12 open reading frame 49##AK298857|C12orf49|79794|chromosome 12 open reading frame 49##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2	0.970563	CTCF.p2:17:0.953	CTCF.p2:-108:0.463
chr15	41477173	41477295	reg1015468.p1	9.118	+	TSC_hg19_v1_chr15_-_41408423 BC012578	-68801	-	BC144681 AB033085 NM_017553 BC146785 TSC_hg19_v1_chr15_-_41408344	-68897	-	TSC_hg19_v1_chr15_-_41364176 AK057582	-113030	-	AK292524 AK302864 BC030628 NM_152596 TSC_hg19_v1_chr15_-_41522946	45670	-	TSC_hg19_v1_chr15_+_41523431 AK299660 NM_007236	46184	+	TSC_hg19_v1_chr15_+_41523465 AK307060 AK312582 BC051815 BC031293 CR536539 CR542085	46288	+	BC012578|INO80|54617|INO80 homolog (S. cerevisiae)##BC144681|INO80|54617|INO80 homolog (S. cerevisiae)##AB033085|INO80|54617|INO80 homolog (S. cerevisiae)##NM_017553|INO80|54617|INO80 homolog (S. cerevisiae)##BC146785|INO80|54617|INO80 homolog (S. cerevisiae)##AK057582|INO80|54617|INO80 homolog (S. cerevisiae)##AK292524|EXD1|161829|exonuclease 3'-5' domain containing 1##AK302864|EXD1|161829|exonuclease 3'-5' domain containing 1##BC030628|EXD1|161829|exonuclease 3'-5' domain containing 1##NM_152596|EXD1|161829|exonuclease 3'-5' domain containing 1##AK299660|CHP|11261|calcium binding protein P22##NM_007236|CHP|11261|calcium binding protein P22##AK307060|CHP|11261|calcium binding protein P22##AK312582|CHP|11261|calcium binding protein P22##BC031293|CHP|11261|calcium binding protein P22##CR536539|CHP|11261|calcium binding protein P22##CR542085|CHP|11261|calcium binding protein P22	0.873984	CTCF.p2:-5:0.874
chr2	172978492	172978605	reg1012565.p2	9.118	+	AK291367 AK316129 TSC_hg19_v1_chr2_-_172967629	-10919	-	TSC_hg19_v1_chr2_-_172967234 HQ258018 AB208823 AK297503 BC032558 NM_004405	-11193	-	L07919 TSC_hg19_v1_chr2_-_172967055	-11514	-	AK311695 AK296496 TSC_hg19_v1_chr2_+_173292147	313579	+	TSC_hg19_v1_chr2_+_173292316 NM_000210 NM_001079818 BC007002	313772	+	TSC_hg19_v1_chr2_+_173292395 X53586 BC136455 BC136456 X59512 AB208842	313931	+	AK291367|DLX2|1746|distal-less homeobox 2##AK316129|DLX2|1746|distal-less homeobox 2##HQ258018|DLX2|1746|distal-less homeobox 2##AB208823|DLX2|1746|distal-less homeobox 2##AK297503|DLX2|1746|distal-less homeobox 2##BC032558|DLX2|1746|distal-less homeobox 2##NM_004405|DLX2|1746|distal-less homeobox 2##L07919|DLX2|1746|distal-less homeobox 2##AK311695|ITGA6|3655|integrin, alpha 6##AK296496|ITGA6|3655|integrin, alpha 6##NM_000210|ITGA6|3655|integrin, alpha 6##NM_001079818|ITGA6|3655|integrin, alpha 6##BC007002|ITGA6|3655|integrin, alpha 6##X53586|ITGA6|3655|integrin, alpha 6##BC136455|ITGA6|3655|integrin, alpha 6##BC136456|ITGA6|3655|integrin, alpha 6##X59512|ITGA6|3655|integrin, alpha 6##AB208842|ITGA6|3655|integrin, alpha 6	0.128542	
chr2	8833511	8833609	reg1012493.p1	9.118	+	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-11357	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1775973	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1815697	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	144159	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	310261	-	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	513332	+	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	0.585067	CTCF.p2:5:0.552
chr5	33423229	33423390	reg1014197.p1	9.118	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	-711504	+	AK290870 NM_000908 NM_001204375 M59305	-711821	+	NM_001204376 AK300094 AK308301	-712559	+	AK292346 TSC_hg19_v1_chr5_+_33440874 NM_152295	17547	+	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	17830	+	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	468736	-	BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK292346|TARS|6897|threonyl-tRNA synthetase##NM_152295|TARS|6897|threonyl-tRNA synthetase##AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	0.525999	CTCF.p2:24:0.526
chr11	33851179	33851299	reg1012995.p1	9.117	+	AB209039 AF176702 TSC_hg19_v1_chr11_-_33796067 AF174595 CU692298 EU832324 EU832409 AL136625 BC046110 AK001943 AK128454 AK304866 BC039291 NM_012175 NM_033406	-55247	-	TSC_hg19_v1_chr11_-_33757970 M27909 AK311778 X16447 X17198 NM_000611 NM_203329 NM_203330 NM_203331	-93291	-	NM_001127227	-106742	-	AB463835 CU692080 DQ892333 DQ895538 BC073973 TSC_hg19_v1_chr11_-_33891132	39803	-	BC035607 TSC_hg19_v1_chr11_-_33891285	40033	-	BC042426 TSC_hg19_v1_chr11_-_33891402 BC034041 NM_001142316	40152	-	AB209039|FBXO3|26273|F-box protein 3##AF176702|FBXO3|26273|F-box protein 3##AF174595|FBXO3|26273|F-box protein 3##EU832324|FBXO3|26273|F-box protein 3##EU832409|FBXO3|26273|F-box protein 3##AL136625|FBXO3|26273|F-box protein 3##BC046110|FBXO3|26273|F-box protein 3##AK001943|FBXO3|26273|F-box protein 3##AK128454|FBXO3|26273|F-box protein 3##AK304866|FBXO3|26273|F-box protein 3##BC039291|FBXO3|26273|F-box protein 3##NM_012175|FBXO3|26273|F-box protein 3##NM_033406|FBXO3|26273|F-box protein 3##M27909|CD59|966|CD59 molecule, complement regulatory protein##AK311778|CD59|966|CD59 molecule, complement regulatory protein##X16447|CD59|966|CD59 molecule, complement regulatory protein##X17198|CD59|966|CD59 molecule, complement regulatory protein##NM_000611|CD59|966|CD59 molecule, complement regulatory protein##NM_203329|CD59|966|CD59 molecule, complement regulatory protein##NM_203330|CD59|966|CD59 molecule, complement regulatory protein##NM_203331|CD59|966|CD59 molecule, complement regulatory protein##NM_001127227|CD59|966|CD59 molecule, complement regulatory protein##DQ892333|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##DQ895538|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC073973|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC035607|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC042426|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC034041|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142316|LMO2|4005|LIM domain only 2 (rhombotin-like 1)	0.0	
chr16	24510626	24510755	reg1016032.p1	9.117	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	-242992	+	AK055453 TSC_hg19_v1_chr16_+_24267474	-243216	+	BC037899 NM_006539 AK095553	-243816	+	TSC_hg19_v1_chr16_+_24550886 NM_006910 NM_018703 NM_032626	40203	+	AF063596 BC101139 BC101140 BC101141 BC101142 BC114353 BC114354 BC118667 BC139830 BC029352 BC063524 AB112074 AB112075 BX648661 TSC_hg19_v1_chr16_+_24552052	41174	+	BC029649 TSC_hg19_v1_chr16_+_24567629	56938	+	BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006910|RBBP6|5930|retinoblastoma binding protein 6##NM_018703|RBBP6|5930|retinoblastoma binding protein 6##NM_032626|RBBP6|5930|retinoblastoma binding protein 6##AF063596|RBBP6|5930|retinoblastoma binding protein 6##BC101139|RBBP6|5930|retinoblastoma binding protein 6##BC101140|RBBP6|5930|retinoblastoma binding protein 6##BC101141|RBBP6|5930|retinoblastoma binding protein 6##BC101142|RBBP6|5930|retinoblastoma binding protein 6##BC114353|RBBP6|5930|retinoblastoma binding protein 6##BC114354|RBBP6|5930|retinoblastoma binding protein 6##BC118667|RBBP6|5930|retinoblastoma binding protein 6##BC139830|RBBP6|5930|retinoblastoma binding protein 6##BC029352|RBBP6|5930|retinoblastoma binding protein 6##BC063524|RBBP6|5930|retinoblastoma binding protein 6##AB112074|RBBP6|5930|retinoblastoma binding protein 6##AB112075|RBBP6|5930|retinoblastoma binding protein 6##BX648661|RBBP6|5930|retinoblastoma binding protein 6##BC029649|RBBP6|5930|retinoblastoma binding protein 6	0.861424	CTCF.p2:19:0.861
chrX	40403267	40403408	reg1013780.p1	9.117	+	BC114220 NM_001123383 NM_001123384	-366756	-	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	-446645	-	TSC_hg19_v1_chrX_+_38663536 AK001248	-1739797	+	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	36849	+	AF291814 TSC_hg19_v1_chrX_+_40440231 AK293510 BC084541 AK297007 AF109363	36905	+	TSC_hg19_v1_chrX_+_40440264 AK314633 AK315948	36935	+	BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF291814|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK293510|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##BC084541|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK297007|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF109363|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK314633|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK315948|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.997155	CTCF.p2:-10:0.997
chr19	56015467	56015616	reg1014030.p1	9.116	+	TSC_hg19_v1_chr19_+_55999923 EU699476 EU699477	-15614	+	TSC_hg19_v1_chr19_+_55999863 AK092577 AX747607 NM_001144950 NM_001195267	-15677	+	TSC_hg19_v1_chr19_+_55996577 NM_020378 AF086533 BC019079 AB038651	-18969	+	NM_001101401	32893	-	NM_001199824	41367	-	TSC_hg19_v1_chr19_-_56092206 AK092772 AX747719 NM_152600	76673	-	EU699476|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##EU699477|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##AK092577|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##NM_001144950|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##NM_001195267|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##NM_020378|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##AF086533|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##BC019079|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##AB038651|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##NM_001101401|SBK2|646643|SH3-binding domain kinase family, member 2##NM_001199824|SGK110|100130827|putative uncharacterized serine/threonine-protein kinase SgK110-like##AK092772|ZNF579|163033|zinc finger protein 579##NM_152600|ZNF579|163033|zinc finger protein 579	0.994148	CTCF.p2:26:0.994
chr20	32380034	32380169	reg1014776.p1	9.116	+	BC132873 BC144188 BC157823 BC146811 BC094738 NM_032819 BC063492 BC040440 AB587355 HQ258664	-60305	+	TSC_hg19_v1_chr20_-_32308117 CR533471 CU674580 EU832287 EU832372 BC001147 AK023879 AF072864 AL136648 AK301532 AK316589 AK297018 NM_007238 NM_183397	-72087	-	TSC_hg19_v1_chr20_-_32274190 BC065188 S49592 M96577 BC050369 NM_005225	-105904	-	TSC_hg19_v1_chr20_+_32399127 NM_176812	18985	+	TSC_hg19_v1_chr20_+_32399155 AB100261 BC033859 AY726594 AY329085	19119	+	TSC_hg19_v1_chr20_+_32581531 NM_007367 NM_016732	201378	+	BC132873|ZNF341|84905|zinc finger protein 341##BC144188|ZNF341|84905|zinc finger protein 341##BC157823|ZNF341|84905|zinc finger protein 341##BC146811|ZNF341|84905|zinc finger protein 341##BC094738|ZNF341|84905|zinc finger protein 341##NM_032819|ZNF341|84905|zinc finger protein 341##BC063492|ZNF341|84905|zinc finger protein 341##BC040440|ZNF341|84905|zinc finger protein 341##HQ258664|ZNF341|84905|zinc finger protein 341##CR533471|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##EU832287|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##EU832372|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##BC001147|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK023879|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AF072864|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AL136648|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK301532|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK316589|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK297018|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##NM_007238|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##NM_183397|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##S49592|E2F1|1869|E2F transcription factor 1##M96577|E2F1|1869|E2F transcription factor 1##BC050369|E2F1|1869|E2F transcription factor 1##NM_005225|E2F1|1869|E2F transcription factor 1##NM_176812|CHMP4B|128866|charged multivesicular body protein 4B##AB100261|CHMP4B|128866|charged multivesicular body protein 4B##BC033859|CHMP4B|128866|charged multivesicular body protein 4B##AY726594|CHMP4B|128866|charged multivesicular body protein 4B##AY329085|CHMP4B|128866|charged multivesicular body protein 4B##NM_007367|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##NM_016732|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))	0.966162	CTCF.p2:21:0.966
chrX	46241216	46241345	reg1015505.p1	9.116	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	-1181167	-	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-1508844	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-1537967	+	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	65431	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	163576	-	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	163664	+	BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588	0.603515	CTCF.p2:-12:0.604
chr11	60110706	60110836	reg1012383.p1	9.115	+	BC101783 AF333758 AF354931 BC069322 NM_139249 GQ129453 GQ129454 AF354933 BC034588 AF354932	-8389	+	NM_001243266 NM_024021 NM_148975 AK292089 AK075081 TSC_hg19_v1_chr11_+_60048138 BC020648 CU676600 DQ891395 DQ894573 AB022821 AK314033 AB013102	-62678	+	AK291870 NM_001247999 NM_152852	-158633	-	AK075106 NM_021201 NM_206938 NM_206939 NM_206940 AK297027 TSC_hg19_v1_chr11_+_60146004 BC043485 AF309653 AK309884	35216	+	TSC_hg19_v1_chr11_+_60146063 BC020673 AF237916 AF201951 AF350501	35288	+	NM_001079692 NM_032597	52715	+	BC101783|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF333758|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354931|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC069322|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_139249|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129453|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129454|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354933|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC034588|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354932|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_001243266|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_024021|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_148975|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK292089|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK075081|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC020648|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ891395|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ894573|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB022821|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK314033|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB013102|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK291870|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001247999|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK075106|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_021201|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206938|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206939|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206940|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK297027|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF309653|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK309884|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##BC020673|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF237916|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF201951|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF350501|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_001079692|MS4A14|84689|membrane-spanning 4-domains, subfamily A, member 14##NM_032597|MS4A14|84689|membrane-spanning 4-domains, subfamily A, member 14	0.614758	CTCF.p2:1:0.580
chr3	185276928	185277047	reg1013911.p2	9.115	+	CU687970 TSC_hg19_v1_chr3_-_185270374 AK298380 AY036912 AY093498 EF186228 EF186229 BC064941 AK122651 NM_139248	-6659	-	TSC_hg19_v1_chr3_-_185216824 EU831805 EU831882 AK313954 BC019884 BC008043 BX647928 AY358547 AK172748 AK290878 NM_080652	-60288	-	BC026249 NM_004721 AK296961 AB001872 BC111726	-196055	+	AK304402 TSC_hg19_v1_chr3_+_185304106 AF151697 NM_021627 AK296772 AK027599 AK296744 BC040609 CU691906 AB037752 AB385449 AL834380	27096	+	CU676908 DQ892161 EU176689 TSC_hg19_v1_chr3_-_185542803 AK309611 AF117107 BC012322	265787	-	TSC_hg19_v1_chr3_-_185542828 BC021290 AK290664 NM_001007225 NM_006548	265844	-	AK298380|LIPH|200879|lipase, member H##AY036912|LIPH|200879|lipase, member H##AY093498|LIPH|200879|lipase, member H##EF186228|LIPH|200879|lipase, member H##EF186229|LIPH|200879|lipase, member H##BC064941|LIPH|200879|lipase, member H##AK122651|LIPH|200879|lipase, member H##NM_139248|LIPH|200879|lipase, member H##EU831805|TMEM41A|90407|transmembrane protein 41A##EU831882|TMEM41A|90407|transmembrane protein 41A##AK313954|TMEM41A|90407|transmembrane protein 41A##BC019884|TMEM41A|90407|transmembrane protein 41A##BC008043|TMEM41A|90407|transmembrane protein 41A##BX647928|TMEM41A|90407|transmembrane protein 41A##AY358547|TMEM41A|90407|transmembrane protein 41A##AK172748|TMEM41A|90407|transmembrane protein 41A##AK290878|TMEM41A|90407|transmembrane protein 41A##NM_080652|TMEM41A|90407|transmembrane protein 41A##NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##DQ892161|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##EU176689|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK309611|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AF117107|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##BC021290|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK290664|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##NM_001007225|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##NM_006548|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2	0.595806	CTCF.p2:5:0.596
chr1	25363791	25363935	reg1014199.p1	9.114	+	BC013362 AK310945 NM_001031680 AF022726	-72321	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-107077	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-107124	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	195124	-	BC065040 TSC_hg19_v1_chr1_-_25573922	210060	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	210110	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.924192	CTCF.p2:-21:0.911
chr12	7261847	7261979	reg1013634.p1	9.113	+	BC128428 AF178985 TSC_hg19_v1_chr12_-_7261802 AK222802 BC062428 AK314299 AK024084 NM_016546	-85	-	TSC_hg19_v1_chr12_-_7245057 AK291313	-16854	-	TSC_hg19_v1_chr12_-_7245038 M14058 X04701 AK024951 AK222481 AK222491 AK303750 BC035220 NM_001733	-16889	-	DQ892613 DQ895853 AY007436 AF212239 NM_031491 AK311977 AK096947 AK223378 BC029355	19517	-	TSC_hg19_v1_chr12_+_7282990 AK316059 NM_014718 AJ277460 BC111491 AK299177 BC104767 BC112283 AB527393 BC148258	21211	+	AK292256 NM_001131026	79845	+	AF178985|C1RL|51279|complement component 1, r subcomponent-like##AK222802|C1RL|51279|complement component 1, r subcomponent-like##BC062428|C1RL|51279|complement component 1, r subcomponent-like##AK314299|C1RL|51279|complement component 1, r subcomponent-like##AK024084|C1RL|51279|complement component 1, r subcomponent-like##NM_016546|C1RL|51279|complement component 1, r subcomponent-like##AK291313|C1R|715|complement component 1, r subcomponent##M14058|C1R|715|complement component 1, r subcomponent##X04701|C1R|715|complement component 1, r subcomponent##AK024951|C1R|715|complement component 1, r subcomponent##AK222481|C1R|715|complement component 1, r subcomponent##AK222491|C1R|715|complement component 1, r subcomponent##AK303750|C1R|715|complement component 1, r subcomponent##BC035220|C1R|715|complement component 1, r subcomponent##NM_001733|C1R|715|complement component 1, r subcomponent##DQ892613|RBP5|83758|retinol binding protein 5, cellular##DQ895853|RBP5|83758|retinol binding protein 5, cellular##AY007436|RBP5|83758|retinol binding protein 5, cellular##AF212239|RBP5|83758|retinol binding protein 5, cellular##NM_031491|RBP5|83758|retinol binding protein 5, cellular##AK311977|RBP5|83758|retinol binding protein 5, cellular##AK096947|RBP5|83758|retinol binding protein 5, cellular##AK223378|RBP5|83758|retinol binding protein 5, cellular##BC029355|RBP5|83758|retinol binding protein 5, cellular##AK316059|CLSTN3|9746|calsyntenin 3##NM_014718|CLSTN3|9746|calsyntenin 3##AJ277460|CLSTN3|9746|calsyntenin 3##BC111491|CLSTN3|9746|calsyntenin 3##AK299177|CLSTN3|9746|calsyntenin 3##BC104767|CLSTN3|9746|calsyntenin 3##BC112283|CLSTN3|9746|calsyntenin 3##BC148258|CLSTN3|9746|calsyntenin 3##AK292256|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131026|PEX5|5830|peroxisomal biogenesis factor 5	0.850033	CTCF.p2:9:0.850
chr18	74332356	74332447	reg1012590.p1	9.113	+	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	-125246	-	BC108287 TSC_hg19_v1_chr18_-_74092260	-240151	-	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-1192779	-	TSC_hg19_v1_chr18_-_74534239 BC032908	201838	-	TSC_hg19_v1_chr18_+_74534512 BX648028	202109	+	AF085243 AF085244 NM_007345	203714	+	D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC108287|ZNF516|9658|zinc finger protein 516##BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##BC032908|LOC100131655|100131655|uncharacterized LOC100131655##BX648028|ZNF236|7776|zinc finger protein 236##AF085243|ZNF236|7776|zinc finger protein 236##AF085244|ZNF236|7776|zinc finger protein 236##NM_007345|ZNF236|7776|zinc finger protein 236	0.262453	CTCF.p2:-19:0.262
chr19	605621	605801	reg1004882.p2	9.113	+	TSC_hg19_v1_chr19_+_589888 AJ012582 NM_001194 AF065164 DQ854815 AB527443	-15798	+	TSC_hg19_v1_chr19_+_572595 X64364 AY358113 BC009040 AB085790 AK296858 AK297880 D28441 D45131 AB072923 L10240 AB091680 M87879 AB463434	-33049	+	TSC_hg19_v1_chr19_+_572571 AF548371	-33140	+	TSC_hg19_v1_chr19_-_633520 AK307525 BC030829	27787	-	TSC_hg19_v1_chr19_-_633538 AK225723 AK225865 BC098387 U75370	27832	-	TSC_hg19_v1_chr19_-_633564 BC070057 NM_005035	27889	-	AJ012582|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##NM_001194|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##AF065164|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##DQ854815|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##X64364|BSG|682|basigin (Ok blood group)##AY358113|BSG|682|basigin (Ok blood group)##BC009040|BSG|682|basigin (Ok blood group)##AB085790|BSG|682|basigin (Ok blood group)##AK296858|BSG|682|basigin (Ok blood group)##AK297880|BSG|682|basigin (Ok blood group)##D28441|BSG|682|basigin (Ok blood group)##D45131|BSG|682|basigin (Ok blood group)##AB072923|BSG|682|basigin (Ok blood group)##L10240|BSG|682|basigin (Ok blood group)##AB091680|BSG|682|basigin (Ok blood group)##M87879|BSG|682|basigin (Ok blood group)##AF548371|BSG|682|basigin (Ok blood group)##AK307525|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC030829|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##AK225723|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##AK225865|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC098387|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##U75370|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC070057|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##NM_005035|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)	0.257036	
chr20	53297486	53297642	reg1014422.p1	9.113	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-205350	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	-472927	+	TSC_hg19_v1_chr20_+_52824396 NM_002623	-473117	+	NM_080617	1282447	-	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	1526223	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	1636460	+	BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##NM_002623|PFDN4|5203|prefoldin subunit 4##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B	0.925699	CTCF.p2:4:0.926
chr9	90565826	90565947	reg1013492.p1	9.113	+	NM_001145124 AK310310	-33008	+	AK093206 AX747990 AK125845 NM_178828 BC137349	-68129	+	TSC_hg19_v1_chr9_+_90341123 BC012612	-224742	+	AY904367 AX810715 BC002655 AX810688 AK298993 TSC_hg19_v1_chr9_-_90589450 AK296328 AK075325 AK294193 AK226135	23523	-	AF035013 AK291713 BX647489 TSC_hg19_v1_chr9_-_90589702 NM_001039803 NM_001170639 NM_001170640 NM_012119 NM_178432	23761	-	AK302448 NM_001166137	184013	-	NM_001145124|FAM75C1|441452|family with sequence similarity 75, member C1##AK093206|C9orf79|286234|chromosome 9 open reading frame 79##AK125845|C9orf79|286234|chromosome 9 open reading frame 79##NM_178828|C9orf79|286234|chromosome 9 open reading frame 79##BC137349|C9orf79|286234|chromosome 9 open reading frame 79##BC012612|CTSL1|1514|cathepsin L1##AY904367|CDK20|23552|cyclin-dependent kinase 20##BC002655|CDK20|23552|cyclin-dependent kinase 20##AK298993|CDK20|23552|cyclin-dependent kinase 20##AK296328|CDK20|23552|cyclin-dependent kinase 20##AK075325|CDK20|23552|cyclin-dependent kinase 20##AK294193|CDK20|23552|cyclin-dependent kinase 20##AK226135|CDK20|23552|cyclin-dependent kinase 20##AF035013|CDK20|23552|cyclin-dependent kinase 20##AK291713|CDK20|23552|cyclin-dependent kinase 20##BX647489|CDK20|23552|cyclin-dependent kinase 20##NM_001039803|CDK20|23552|cyclin-dependent kinase 20##NM_001170639|CDK20|23552|cyclin-dependent kinase 20##NM_001170640|CDK20|23552|cyclin-dependent kinase 20##NM_012119|CDK20|23552|cyclin-dependent kinase 20##NM_178432|CDK20|23552|cyclin-dependent kinase 20##AK302448|FAM75C2|645961|family with sequence similarity 75, member C2##NM_001166137|FAM75C2|645961|family with sequence similarity 75, member C2	0.912284	CTCF.p2:-19:0.912
chr4	9512033	9512143	reg1013426.p1	9.112	+	AF529414 NM_001040448	-65829	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-147235	+	AF544012 BC100991 NM_001105662	-151980	+	NM_000798	271169	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	511036	-	AK310895 BC018897 NM_001001290 AK096819	529834	-	AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF544012|USP17|391627|ubiquitin specific peptidase 17##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_000798|DRD5|1816|dopamine receptor D5##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	1.631974	CTCF.p2:26:0.892	CTCF.p2:-76:0.740
chr8	66945983	66946118	reg1010806.p1	9.112	+	NM_033105 BC016742 AF368276 AL133660	-12231	+	TSC_hg19_v1_chr8_-_66754300 AK292680	-191758	-	NM_001242318	-192082	-	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	93290	+	BC002599 BC011031 AK075431 NM_000756	144717	-	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	395256	+	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AK292680|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	0.0	
chr12	57402019	57402158	reg1015653.p1	9.110	+	BC140890 BC146867 AB002350 BC152461 TSC_hg19_v1_chr12_-_57400241 AK292468 NM_014830	-1837	-	BC034761 NM_007264 Y13583	-13797	+	AF057034 NM_003708	-50689	-	AF216586 AF186112 AX810719 AF136174 AX810703 AF537113 AF537114 AF537115 AF537116 AF537117 AF537118 AF537119 AF537120 AF537121 AY358679 BC032145 NM_001178054 NM_013251	8221	-	AF105424 AF127026 NM_005379 BC059387	41791	-	TSC_hg19_v1_chr12_-_57472533 HQ258223 AB383838 AB006624	70423	-	BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39##BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39##AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39##BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39##AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39##NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39##BC034761|GPR182|11318|G protein-coupled receptor 182##NM_007264|GPR182|11318|G protein-coupled receptor 182##Y13583|GPR182|11318|G protein-coupled receptor 182##AF057034|RDH16|8608|retinol dehydrogenase 16 (all-trans)##NM_003708|RDH16|8608|retinol dehydrogenase 16 (all-trans)##AF216586|TAC3|6866|tachykinin 3##AF186112|TAC3|6866|tachykinin 3##AF537113|TAC3|6866|tachykinin 3##AF537114|TAC3|6866|tachykinin 3##AF537115|TAC3|6866|tachykinin 3##AF537116|TAC3|6866|tachykinin 3##AF537117|TAC3|6866|tachykinin 3##AF537118|TAC3|6866|tachykinin 3##AF537119|TAC3|6866|tachykinin 3##AF537120|TAC3|6866|tachykinin 3##AF537121|TAC3|6866|tachykinin 3##AY358679|TAC3|6866|tachykinin 3##BC032145|TAC3|6866|tachykinin 3##NM_001178054|TAC3|6866|tachykinin 3##NM_013251|TAC3|6866|tachykinin 3##AF105424|MYO1A|4640|myosin IA##AF127026|MYO1A|4640|myosin IA##NM_005379|MYO1A|4640|myosin IA##BC059387|MYO1A|4640|myosin IA##HQ258223|TMEM194A|23306|transmembrane protein 194A##AB006624|TMEM194A|23306|transmembrane protein 194A	0.027214	
chr1	42277756	42277902	reg1014526.p2	9.110	+	BC034393 X55177 M65199 NM_001956	-327510	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-569993	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-570044	-	TSC_hg19_v1_chr1_-_42384357 BC040942	106513	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	106544	-	TSC_hg19_v1_chr1_-_42501606 BC046120	223800	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.878101	CTCF.p2:4:0.878
chr15	79632484	79632594	reg1013690.p1	9.110	+	TSC_hg19_v1_chr15_+_79603557 AJ132270 CR457384	-28972	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	-29036	+	TSC_hg19_v1_chr15_+_79603465 BC111547 BC010853 AK222516 BC022232 AK289434 AK297710 NM_007364 BC017495 AL109672 AY358974 BC000027	-29078	+	AB028947 NM_015206 BC152466	92320	+	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	556841	-	NM_001199758	557087	-	AJ132270|TMED3|23423|transmembrane emp24 protein transport domain containing 3##CR457384|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC111547|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC010853|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK222516|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC022232|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK289434|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK297710|TMED3|23423|transmembrane emp24 protein transport domain containing 3##NM_007364|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC017495|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AL109672|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AY358974|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC000027|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)	0.896948	CTCF.p2:0:0.897
chr5	68258831	68258962	reg1013491.p2	9.110	+	AK094785 NM_001242466 AK294919	-670444	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-672350	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-674602	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	130907	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	130986	+	AK292925 TSC_hg19_v1_chr5_+_68389913	131017	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.974431	CTCF.p2:1:0.974
chr1	111098016	111098125	reg1013914.p1	9.109	+	NM_005549	-36274	-	AY358683 AF333024 NM_032414 AY029225 BC025399 DQ891570 DQ894763	-104279	+	HQ257924 NM_006402 BC062619	-147544	-	AK290061 NM_004974 TSC_hg19_v1_chr1_-_111148981	50912	-	BC043564 NM_001204269	76025	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	119282	-	NM_005549|KCNA10|3744|potassium voltage-gated channel, shaker-related subfamily, member 10##AY358683|PROK1|84432|prokineticin 1##AF333024|PROK1|84432|prokineticin 1##NM_032414|PROK1|84432|prokineticin 1##AY029225|PROK1|84432|prokineticin 1##BC025399|PROK1|84432|prokineticin 1##DQ891570|PROK1|84432|prokineticin 1##DQ894763|PROK1|84432|prokineticin 1##HQ257924|HBXIP|10542|hepatitis B virus x interacting protein##NM_006402|HBXIP|10542|hepatitis B virus x interacting protein##BC062619|HBXIP|10542|hepatitis B virus x interacting protein##AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##BC043564|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_001204269|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3	0.95551	CTCF.p2:-13:0.956
chr2	102500458	102500585	reg1015497.p1	9.109	+	TSC_hg19_v1_chr2_+_102314168 NM_001242560 NM_004834 NM_145686 BC064691 AK296396 AF096300 NM_001242559 NM_145687 AB384511 AY212247 AY834276	-186169	+	AK131289 AK298610 NM_001145664 TSC_hg19_v1_chr2_-_102091212	-409328	-	TSC_hg19_v1_chr2_-_102003966 BC032949 BC047514 NM_153836 AB046109	-496532	-	TSC_hg19_v1_chr2_+_102508334 BC045694	7821	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	8011	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	107842	+	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK131289|RFX8|731220|regulatory factor X, 8##AK298610|RFX8|731220|regulatory factor X, 8##NM_001145664|RFX8|731220|regulatory factor X, 8##BC032949|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC047514|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_153836|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AB046109|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II	0.772763	CTCF.p2:-24:0.773
chr2	196933114	196933239	reg1013739.p1	9.109	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	-411268	+	BC029413 NM_001127257 CR749813	-411601	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-3873547	-	AB463018 AF327442 AK094515 NM_018897 AB023161	319	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	103103	-	TSC_hg19_v1_chr2_-_197036310 NM_004226	103142	-	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##NM_004226|STK17B|9262|serine/threonine kinase 17b	0.985918	CTCF.p2:-2:0.986
chr4	55099554	55099699	reg1015181.p1	9.109	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-4162	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-4346	+	AB028838 EU596451 NM_133267	-133404	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	424508	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	892128	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	1112790	+	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB028838|GSX2|170825|GS homeobox 2##EU596451|GSX2|170825|GS homeobox 2##NM_133267|GSX2|170825|GS homeobox 2##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3	0.980672	CTCF.p2:12:0.981
chr7	36513112	36513209	reg1012781.p1	9.109	+	BC028678 NM_001100425	-83446	-	TSC_hg19_v1_chr7_+_36429470 BC070066 NM_018685 AK299803 AK291254 AF273437	-83720	+	TSC_hg19_v1_chr7_-_36406811 BC056191 AB384038 BC136362 BC144032 AB020702 BC110422 NM_001199707 AK293912 AK294686 AK302559 NM_001199706 NM_015314 NM_001199708	-106488	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	250916	-	BC064635 NM_001039459	511530	-	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	512560	-	BC028678|KIAA0895|23366|KIAA0895##NM_001100425|KIAA0895|23366|KIAA0895##BC070066|ANLN|54443|anillin, actin binding protein##NM_018685|ANLN|54443|anillin, actin binding protein##AK299803|ANLN|54443|anillin, actin binding protein##AK291254|ANLN|54443|anillin, actin binding protein##AF273437|ANLN|54443|anillin, actin binding protein##BC056191|KIAA0895|23366|KIAA0895##BC136362|KIAA0895|23366|KIAA0895##BC144032|KIAA0895|23366|KIAA0895##AB020702|KIAA0895|23366|KIAA0895##BC110422|KIAA0895|23366|KIAA0895##NM_001199707|KIAA0895|23366|KIAA0895##AK293912|KIAA0895|23366|KIAA0895##AK294686|KIAA0895|23366|KIAA0895##AK302559|KIAA0895|23366|KIAA0895##NM_001199706|KIAA0895|23366|KIAA0895##NM_015314|KIAA0895|23366|KIAA0895##NM_001199708|KIAA0895|23366|KIAA0895##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1	0.772824	CTCF.p2:1:0.773
chr16	87236894	87237046	reg1014373.p1	9.108	+	BC100027 NM_005250	-624856	+	BC113437 BC113439 NM_005251	-636114	+	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	-648198	-	TSC_hg19_v1_chr16_-_87350760 AB528835 AM392822 AM393070	113830	-	TSC_hg19_v1_chr16_-_87350999 BC015536 AK026130 NM_001195124 NM_001195125	114016	-	TSC_hg19_v1_chr16_-_87417364 AY736035 AF428140 BC012748 BC002985 NM_024735	180392	-	BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AM392822|C16orf95|100506581|chromosome 16 open reading frame 95##AM393070|C16orf95|100506581|chromosome 16 open reading frame 95##BC015536|C16orf95|100506581|chromosome 16 open reading frame 95##AK026130|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195124|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195125|C16orf95|100506581|chromosome 16 open reading frame 95##AY736035|FBXO31|79791|F-box protein 31##AF428140|FBXO31|79791|F-box protein 31##BC012748|FBXO31|79791|F-box protein 31##BC002985|FBXO31|79791|F-box protein 31##NM_024735|FBXO31|79791|F-box protein 31	0.948297	CTCF.p2:0:0.948
chr22	29552659	29552775	reg1013960.p2	9.108	+	TSC_hg19_v1_chr22_+_29469035 BC063787 NM_001039570 NM_032045 AK056425 AB059618	-83695	+	CR456405 BC074758 BC126262 BC126264 AL035364 NM_015370	-94868	-	TSC_hg19_v1_chr22_+_29449893 BC042614	-102792	+	TSC_hg19_v1_chr22_+_29601914 BC046358 NM_133455 CR456407 CU012965 CU013253 AB463024 AJ416090	49175	+	TSC_hg19_v1_chr22_-_29663824 AL050346 NM_012265	111151	-	NM_001163285 NM_001163286 NM_001163287 NM_005243 NM_013986 TSC_hg19_v1_chr22_+_29664088	111330	+	BC063787|KREMEN1|83999|kringle containing transmembrane protein 1##NM_001039570|KREMEN1|83999|kringle containing transmembrane protein 1##NM_032045|KREMEN1|83999|kringle containing transmembrane protein 1##AK056425|KREMEN1|83999|kringle containing transmembrane protein 1##AB059618|KREMEN1|83999|kringle containing transmembrane protein 1##CR456405|C22orf31|25770|chromosome 22 open reading frame 31##BC074758|C22orf31|25770|chromosome 22 open reading frame 31##BC126262|C22orf31|25770|chromosome 22 open reading frame 31##BC126264|C22orf31|25770|chromosome 22 open reading frame 31##AL035364|C22orf31|25770|chromosome 22 open reading frame 31##NM_015370|C22orf31|25770|chromosome 22 open reading frame 31##BC042614|ZNRF3|84133|zinc and ring finger 3##BC046358|EMID1|129080|EMI domain containing 1##NM_133455|EMID1|129080|EMI domain containing 1##CR456407|EMID1|129080|EMI domain containing 1##CU012965|EMID1|129080|EMI domain containing 1##CU013253|EMID1|129080|EMI domain containing 1##AJ416090|EMID1|129080|EMI domain containing 1##AL050346|RHBDD3|25807|rhomboid domain containing 3##NM_012265|RHBDD3|25807|rhomboid domain containing 3##NM_001163285|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163286|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163287|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_005243|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_013986|EWSR1|2130|Ewing sarcoma breakpoint region 1	0.01019	
chr2	95622681	95622804	reg1016354.p1	9.108	+	AK097438 BC021716 NM_144705 AK296678 CU692394	-85492	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3774739	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-5411024	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	68740	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	164800	-	AB049940 TSC_hg19_v1_chr2_-_95787749 BC014172 NM_031902	164970	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5##AB049940|MRPS5|64969|mitochondrial ribosomal protein S5##BC014172|MRPS5|64969|mitochondrial ribosomal protein S5##NM_031902|MRPS5|64969|mitochondrial ribosomal protein S5	0.907166	CTCF.p2:-9:0.907
chr10	85752283	85752409	reg1013361.p2	9.107	+	DQ857894 NM_001165973	-2114904	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-2117264	+	AK123978 NM_001145719	-3451772	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	146911	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	179446	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	181213	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.921835	CTCF.p2:8:0.922
chr6	126210586	126210698	reg1014656.p2	9.107	+	TSC_hg19_v1_chr6_+_126112105 BC036461 AK127512 AB074157 AK294558 BX537385 AL832621 AL832628 AB074156	-98534	+	TSC_hg19_v1_chr6_+_126111841 NM_001122842 NM_001199621 NM_181782	-98789	+	TSC_hg19_v1_chr6_+_126102306 AF493978 NM_001199619 NM_001199620 AK307395 BC137094 BC137095	-108308	+	NM_001199622 TSC_hg19_v1_chr6_+_126240392 AK094706	29781	+	TSC_hg19_v1_chr6_+_126277915 NM_138571 BX647228 AK309857 BC015732 AK057688 AJ420577 AY035387 AY035388 AY486460 AY486461 DQ892201 DQ895396	67343	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	96960	+	BC036461|NCOA7|135112|nuclear receptor coactivator 7##AK127512|NCOA7|135112|nuclear receptor coactivator 7##AB074157|NCOA7|135112|nuclear receptor coactivator 7##AK294558|NCOA7|135112|nuclear receptor coactivator 7##BX537385|NCOA7|135112|nuclear receptor coactivator 7##AL832621|NCOA7|135112|nuclear receptor coactivator 7##AL832628|NCOA7|135112|nuclear receptor coactivator 7##AB074156|NCOA7|135112|nuclear receptor coactivator 7##NM_001122842|NCOA7|135112|nuclear receptor coactivator 7##NM_001199621|NCOA7|135112|nuclear receptor coactivator 7##NM_181782|NCOA7|135112|nuclear receptor coactivator 7##AF493978|NCOA7|135112|nuclear receptor coactivator 7##NM_001199619|NCOA7|135112|nuclear receptor coactivator 7##NM_001199620|NCOA7|135112|nuclear receptor coactivator 7##AK307395|NCOA7|135112|nuclear receptor coactivator 7##BC137094|NCOA7|135112|nuclear receptor coactivator 7##BC137095|NCOA7|135112|nuclear receptor coactivator 7##NM_001199622|NCOA7|135112|nuclear receptor coactivator 7##AK094706|NCOA7|135112|nuclear receptor coactivator 7##NM_138571|HINT3|135114|histidine triad nucleotide binding protein 3##BX647228|HINT3|135114|histidine triad nucleotide binding protein 3##AK309857|HINT3|135114|histidine triad nucleotide binding protein 3##BC015732|HINT3|135114|histidine triad nucleotide binding protein 3##AK057688|HINT3|135114|histidine triad nucleotide binding protein 3##AJ420577|HINT3|135114|histidine triad nucleotide binding protein 3##AY035387|HINT3|135114|histidine triad nucleotide binding protein 3##AY035388|HINT3|135114|histidine triad nucleotide binding protein 3##AY486460|HINT3|135114|histidine triad nucleotide binding protein 3##AY486461|HINT3|135114|histidine triad nucleotide binding protein 3##DQ892201|HINT3|135114|histidine triad nucleotide binding protein 3##DQ895396|HINT3|135114|histidine triad nucleotide binding protein 3##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)	0.922115	CTCF.p2:-5:0.922
chr1	144572785	144572897	reg1013227.p1	9.106	+	TSC_hg19_v1_chr1_-_144521169 AK090660 AX746564	-51612	-	TSC_hg19_v1_chr1_-_144520998 BC063535 BC021732	-51835	-	BC061517 BC073170 BC009950 BC094809 TSC_hg19_v1_chr1_-_144520932	-51910	-	TSC_hg19_v1_chr1_+_144593695 BX538005 AK308678	20857	+	AY894562 AY894567 AY894568 AY894572 AY894574 NM_001037675	42117	+	CU687328 TSC_hg19_v1_chr1_-_144931874 BC078660	358970	-	AK090660|FAM91A2|57234|family with sequence similarity 91, member A2##BC063535|LOC728855|728855|uncharacterized LOC728855##BC021732|LOC728855|728855|uncharacterized LOC728855##BC061517|LOC728855|728855|uncharacterized LOC728855##BC073170|LOC728855|728855|uncharacterized LOC728855##BC009950|LOC728855|728855|uncharacterized LOC728855##BC094809|LOC728855|728855|uncharacterized LOC728855##BX538005|NBPF10|100132406|neuroblastoma breakpoint family, member 10##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894567|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894568|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894572|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894574|NBPF9|400818|neuroblastoma breakpoint family, member 9##NM_001037675|NBPF9|400818|neuroblastoma breakpoint family, member 9##BC078660|PDE4DIP|9659|phosphodiesterase 4D interacting protein	0.943269	CTCF.p2:7:0.943
chr15	74200736	74200854	reg1014170.p1	9.106	+	BC033516 NM_153356 AB449907	-34787	+	BC111368 NM_001039614	-156980	-	TSC_hg19_v1_chr15_+_73976784 AK296358 AK291721 AK309728	-224010	+	TSC_hg19_v1_chr15_+_74218789 NM_005576	17994	+	TSC_hg19_v1_chr15_+_74218802 BC068542 AK303982 AK314222	18006	+	TSC_hg19_v1_chr15_+_74218813 BC015090 L21186	18020	+	BC033516|TBC1D21|161514|TBC1 domain family, member 21##NM_153356|TBC1D21|161514|TBC1 domain family, member 21##AB449907|TBC1D21|161514|TBC1 domain family, member 21##BC111368|C15orf59|388135|chromosome 15 open reading frame 59##NM_001039614|C15orf59|388135|chromosome 15 open reading frame 59##AK296358|CD276|80381|CD276 molecule##AK291721|CD276|80381|CD276 molecule##AK309728|CD276|80381|CD276 molecule##NM_005576|LOXL1|4016|lysyl oxidase-like 1##BC068542|LOXL1|4016|lysyl oxidase-like 1##AK303982|LOXL1|4016|lysyl oxidase-like 1##AK314222|LOXL1|4016|lysyl oxidase-like 1##BC015090|LOXL1|4016|lysyl oxidase-like 1##L21186|LOXL1|4016|lysyl oxidase-like 1	0.991819	CTCF.p2:18:0.992
chr17	34091188	34091327	reg1014031.p1	9.106	+	NM_145272 BC021727 AB528807 AY557347	-3320	+	AF508784 AF508785 NM_139285	-11361	-	AK122652 NM_033315 TSC_hg19_v1_chr17_+_34058691 BC041133	-32540	+	AF219624 BC011774 AY358987 TSC_hg19_v1_chr17_-_34122596 BC002631 AF330002 NM_001032278 NM_024302 AK122604	31371	-	TSC_hg19_v1_chr17_+_34136487 BC048985 AK304520 AK307637 AK314194 BC030591 NM_003487 NM_139215 U51334 AK313223 BC046099 X98893	45252	+	BC039129 TSC_hg19_v1_chr17_+_34171892	80530	+	NM_145272|C17orf50|146853|chromosome 17 open reading frame 50##BC021727|C17orf50|146853|chromosome 17 open reading frame 50##AY557347|C17orf50|146853|chromosome 17 open reading frame 50##AF508784|GAS2L2|246176|growth arrest-specific 2 like 2##AF508785|GAS2L2|246176|growth arrest-specific 2 like 2##NM_139285|GAS2L2|246176|growth arrest-specific 2 like 2##AK122652|RASL10B|91608|RAS-like, family 10, member B##NM_033315|RASL10B|91608|RAS-like, family 10, member B##BC041133|RASL10B|91608|RAS-like, family 10, member B##AF219624|MMP28|79148|matrix metallopeptidase 28##BC011774|MMP28|79148|matrix metallopeptidase 28##AY358987|MMP28|79148|matrix metallopeptidase 28##BC002631|MMP28|79148|matrix metallopeptidase 28##AF330002|MMP28|79148|matrix metallopeptidase 28##NM_001032278|MMP28|79148|matrix metallopeptidase 28##NM_024302|MMP28|79148|matrix metallopeptidase 28##AK122604|MMP28|79148|matrix metallopeptidase 28##BC048985|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK304520|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK307637|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK314194|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##BC030591|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##NM_003487|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##NM_139215|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##U51334|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK313223|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##BC046099|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##X98893|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##BC039129|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa	0.99595	CTCF.p2:-2:0.996
chr19	49112126	49112258	reg1015440.p1	9.106	+	AF353721 NM_133498 AY358387 BC047334	-2183	+	NM_004605	-33200	+	TSC_hg19_v1_chr19_+_49055432 NM_177973 U92315 BC034694 CU689942	-56728	+	BC111970 BC111972 NM_017708 AK000207	4563	-	TSC_hg19_v1_chr19_-_49122434 L11566 BC009708 BC051837 AK091257 AX746879 AK026558 AK293386 BC021743 D28461 NM_000979	10241	-	BC006161 NM_001204158 NM_001243876 NM_020126 TSC_hg19_v1_chr19_+_49122730 AK297787 AK300541	10457	+	AF353721|SPACA4|171169|sperm acrosome associated 4##NM_133498|SPACA4|171169|sperm acrosome associated 4##AY358387|SPACA4|171169|sperm acrosome associated 4##BC047334|SPACA4|171169|sperm acrosome associated 4##NM_004605|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##NM_177973|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##U92315|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##BC034694|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##BC111970|FAM83E|54854|family with sequence similarity 83, member E##BC111972|FAM83E|54854|family with sequence similarity 83, member E##NM_017708|FAM83E|54854|family with sequence similarity 83, member E##AK000207|FAM83E|54854|family with sequence similarity 83, member E##L11566|RPL18|6141|ribosomal protein L18##BC009708|RPL18|6141|ribosomal protein L18##AK026558|RPL18|6141|ribosomal protein L18##AK293386|RPL18|6141|ribosomal protein L18##BC021743|RPL18|6141|ribosomal protein L18##D28461|RPL18|6141|ribosomal protein L18##NM_000979|RPL18|6141|ribosomal protein L18##BC006161|SPHK2|56848|sphingosine kinase 2##NM_001204158|SPHK2|56848|sphingosine kinase 2##NM_001243876|SPHK2|56848|sphingosine kinase 2##NM_020126|SPHK2|56848|sphingosine kinase 2##AK297787|SPHK2|56848|sphingosine kinase 2##AK300541|SPHK2|56848|sphingosine kinase 2	0.919195	CTCF.p2:3:0.909
chr6	116589829	116589961	reg1014231.p1	9.106	+	AB385375 BC040453 TSC_hg19_v1_chr6_-_116575239 AB018264 NM_021648 AK302542 AK091559	-14660	-	BC130621 BC130623 NM_000493	-142635	-	AK097758 TSC_hg19_v1_chr6_-_116422450	-167465	-	AK026849 TSC_hg19_v1_chr6_-_116600165	10255	-	TSC_hg19_v1_chr6_-_116601062 CR533535 AK297717	10788	-	TSC_hg19_v1_chr6_-_116601094 AL136629 BC068554 BC048969	11198	-	BC040453|TSPYL4|23270|TSPY-like 4##AB018264|TSPYL4|23270|TSPY-like 4##NM_021648|TSPYL4|23270|TSPY-like 4##AK302542|TSPYL4|23270|TSPY-like 4##AK091559|TSPYL4|23270|TSPY-like 4##BC130621|COL10A1|1300|collagen, type X, alpha 1##BC130623|COL10A1|1300|collagen, type X, alpha 1##NM_000493|COL10A1|1300|collagen, type X, alpha 1##AK026849|TSPYL1|7259|TSPY-like 1##CR533535|TSPYL1|7259|TSPY-like 1##AL136629|TSPYL1|7259|TSPY-like 1##BC068554|TSPYL1|7259|TSPY-like 1##BC048969|TSPYL1|7259|TSPY-like 1	1.054588	CTCF.p2:23:0.829	CTCF.p2:-53:0.226
chrX	56815401	56815537	reg1013873.p1	9.106	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-59778	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-225418	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-556559	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	206502	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	332459	-	BC071694 NM_019003	348588	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.624483	CTCF.p2:-1:0.624
chr1	85007495	85007643	reg1013637.p2	9.105	+	TSC_hg19_v1_chr1_-_84972262 NM_005274	-35300	-	TSC_hg19_v1_chr1_-_84971888 AK312111	-35645	-	TSC_hg19_v1_chr1_-_84971851 BC003563	-35709	-	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	32537	-	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	148507	-	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	351317	-	NM_005274|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AK312111|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##BC003563|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3	0.021133	
chr3	46965116	46965243	reg1014279.p1	9.105	+	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	-41437	+	BC112221 BC112247 NM_000316 U17418 X68596	-45930	+	AF174483 CU679491 X07373 M24122 AK312044 BC009790 NM_000258	-60254	-	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	53066	-	TSC_hg19_v1_chr3_+_47021155 NM_015175 AK131104 AB384492	56068	+	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	64291	+	BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor##BC112221|PTH1R|5745|parathyroid hormone 1 receptor##BC112247|PTH1R|5745|parathyroid hormone 1 receptor##NM_000316|PTH1R|5745|parathyroid hormone 1 receptor##U17418|PTH1R|5745|parathyroid hormone 1 receptor##X68596|PTH1R|5745|parathyroid hormone 1 receptor##AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12##NM_015175|NBEAL2|23218|neurobeachin-like 2##AK131104|NBEAL2|23218|neurobeachin-like 2##AK092871|NBEAL2|23218|neurobeachin-like 2	0.950619	CTCF.p2:-17:0.951
chr17	18345589	18345667	reg1009947.p1	9.104	+	BC036791 NM_001145127 AK298286 BC026998	-64541	+	TSC_hg19_v1_chr17_-_18266810 BC007979 BC022874 BC038598 AK223552 AK298415 AK302834 AF017065 NM_004169 NM_148918	-78844	-	TSC_hg19_v1_chr17_+_18218610 BC142680 AF467440 BC001018 BC005067 BC014179 BC101115 BC101116 BC101117	-126965	+	AK296659 NM_001040078 AK315818 BC073889 BC105943 TSC_hg19_v1_chr17_+_18380141 CU687266	34504	+	BC101585 BC104815 BC143561 TSC_hg19_v1_chr17_-_18528914 BC062767 BX647826 AK093811 AX748319	183279	-	NM_001039397	202111	-	BC036791|EVPLL|645027|envoplakin-like##NM_001145127|EVPLL|645027|envoplakin-like##AK298286|EVPLL|645027|envoplakin-like##BC026998|EVPLL|645027|envoplakin-like##BC007979|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC022874|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC038598|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK223552|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK298415|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK302834|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AF017065|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_004169|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_148918|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC142680|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##AF467440|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC001018|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC005067|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC014179|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC101115|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC101116|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC101117|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001040078|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##AK315818|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC073889|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##BC101585|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC104815|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC143561|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC062767|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BX647826|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##AK093811|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##NM_001039397|TBC1D28|254272|TBC1 domain family, member 28	0.998648	CTCF.p2:7:0.999
chr9	119423468	119423590	reg1016322.p1	9.104	+	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	-507459	+	AB022761 NM_017418	-1519433	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-1543056	-	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	25933	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	26077	+	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	753784	-	NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2	0.95397	CTCF.p2:5:0.954
chr2	25887683	25887800	reg1014129.p2	9.103	+	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	-322279	-	TSC_hg19_v1_chr2_-_25565353 AB208833	-322378	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	-322413	-	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	8660	-	AB385496 TSC_hg19_v1_chr2_-_26101159	213388	-	TSC_hg19_v1_chr2_-_26101174 AB084279	213432	-	BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)	0.466206	CTCF.p2:14:0.466
chrX	102205993	102206094	reg1014802.p1	9.103	+	BC101169 BC101170 BC101171 BC101172 NM_001031834	-13844	+	TSC_hg19_v1_chrX_+_102024107 BC040959	-181961	+	NM_001142529 NM_001142530	-205137	+	AF220189 AY833561 TSC_hg19_v1_chrX_-_102319085	113039	-	TSC_hg19_v1_chrX_-_102319100 AF237783 AK290958 NM_018476	113088	-	CU689204 DQ891319 DQ894503 BC031616 AF346619 AJ277527 NM_022052 AK302447 TSC_hg19_v1_chrX_-_102348072 AK302586	142010	-	BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like##NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC040959|LOC100287765|100287765|uncharacterized LOC100287765##NM_001142529|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142530|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##AF220189|BEX1|55859|brain expressed, X-linked 1##AY833561|BEX1|55859|brain expressed, X-linked 1##AF237783|BEX1|55859|brain expressed, X-linked 1##AK290958|BEX1|55859|brain expressed, X-linked 1##NM_018476|BEX1|55859|brain expressed, X-linked 1##DQ891319|NXF3|56000|nuclear RNA export factor 3##DQ894503|NXF3|56000|nuclear RNA export factor 3##BC031616|NXF3|56000|nuclear RNA export factor 3##AF346619|NXF3|56000|nuclear RNA export factor 3##AJ277527|NXF3|56000|nuclear RNA export factor 3##NM_022052|NXF3|56000|nuclear RNA export factor 3##AK302447|NXF3|56000|nuclear RNA export factor 3##AK302586|NXF3|56000|nuclear RNA export factor 3	0.946889	CTCF.p2:8:0.947
chr1	82015353	82015495	reg1015304.p1	9.102	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	-243497	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-2542997	-	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-2899926	+	AF104266 AF104938 AF104939 NM_012302	250657	+	AK097722 TSC_hg19_v1_chr1_-_84326308	2310844	-	TSC_hg19_v1_chr1_-_84326677 BC036594	2311252	-	BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.991616	CTCF.p2:-11:0.992
chr2	223478573	223478696	reg1015639.p1	9.102	+	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	-189327	+	TSC_hg19_v1_chr2_+_223289261 AK314322	-189394	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	-315109	-	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	42160	-	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	57775	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	247113	+	AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AK314322|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3	0.920814	CTCF.p2:14:0.921
chr10	94644740	94644888	reg1014773.p1	9.101	+	AK293857 NM_019053 AF220217 TSC_hg19_v1_chr10_+_94608276 AL832501 EF571007 AK315544 BC028395 CU688490 EU832839 GQ129240	-36557	+	NM_001013848	-50345	+	TSC_hg19_v1_chr10_+_94449711 NM_002729 AK309463 AK314891 BC014336 BC015110 L16499 X67235 AB528006 BC050638 EU446478	-195105	+	AY356349 NM_183374	176206	+	AK027560 NM_057157	188417	+	AK075374 NM_000783 AF005418	188842	+	AK293857|EXOC6|54536|exocyst complex component 6##NM_019053|EXOC6|54536|exocyst complex component 6##AF220217|EXOC6|54536|exocyst complex component 6##AL832501|EXOC6|54536|exocyst complex component 6##EF571007|EXOC6|54536|exocyst complex component 6##AK315544|EXOC6|54536|exocyst complex component 6##BC028395|EXOC6|54536|exocyst complex component 6##EU832839|EXOC6|54536|exocyst complex component 6##GQ129240|EXOC6|54536|exocyst complex component 6##NM_001013848|EXOC6|54536|exocyst complex component 6##NM_002729|HHEX|3087|hematopoietically expressed homeobox##AK314891|HHEX|3087|hematopoietically expressed homeobox##BC014336|HHEX|3087|hematopoietically expressed homeobox##BC015110|HHEX|3087|hematopoietically expressed homeobox##L16499|HHEX|3087|hematopoietically expressed homeobox##X67235|HHEX|3087|hematopoietically expressed homeobox##BC050638|HHEX|3087|hematopoietically expressed homeobox##EU446478|HHEX|3087|hematopoietically expressed homeobox##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1	0.980247	CTCF.p2:16:0.980
chr10	98135179	98135308	reg1013445.p1	9.101	+	AF367761 NM_001040102 NM_001040103 NM_033207	-16169	-	NM_001017520 NM_004088 AB046378 AK313615 M26144 BC012920 AK223317 DQ891465 DQ894645	-71075	+	AM180327 AM180328 AM180329 AM180330 AM180331 AM180332 AM180333 AM180334 AM180335 AM180336 AM180337 AM180338 AM180339 AM180340 AM180341 AM180342 AM180343 AM180344 AM180345 AM180346 BC018906 BC110298 AK027779 AF068180 AF068181 AK225546 NM_001114094 NM_013314	-104000	-	AB384048 BC113577 BC112341 BC112366 AB023149 BC013871 BC030548 TSC_hg19_v1_chr10_-_98273674 AK026106 NM_012465	138320	-	AK075451 TSC_hg19_v1_chr10_-_98290333	155094	-	AK074824 TSC_hg19_v1_chr10_-_98321895	186617	-	AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal##NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal##AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal##AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal##M26144|DNTT|1791|deoxynucleotidyltransferase, terminal##BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal##AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal##AM180327|BLNK|29760|B-cell linker##AM180328|BLNK|29760|B-cell linker##AM180329|BLNK|29760|B-cell linker##AM180330|BLNK|29760|B-cell linker##AM180331|BLNK|29760|B-cell linker##AM180332|BLNK|29760|B-cell linker##AM180333|BLNK|29760|B-cell linker##AM180334|BLNK|29760|B-cell linker##AM180335|BLNK|29760|B-cell linker##AM180336|BLNK|29760|B-cell linker##AM180337|BLNK|29760|B-cell linker##AM180338|BLNK|29760|B-cell linker##AM180339|BLNK|29760|B-cell linker##AM180340|BLNK|29760|B-cell linker##AM180341|BLNK|29760|B-cell linker##AM180342|BLNK|29760|B-cell linker##AM180343|BLNK|29760|B-cell linker##AM180344|BLNK|29760|B-cell linker##AM180345|BLNK|29760|B-cell linker##AM180346|BLNK|29760|B-cell linker##BC018906|BLNK|29760|B-cell linker##BC110298|BLNK|29760|B-cell linker##AK027779|BLNK|29760|B-cell linker##AF068180|BLNK|29760|B-cell linker##AF068181|BLNK|29760|B-cell linker##AK225546|BLNK|29760|B-cell linker##NM_001114094|BLNK|29760|B-cell linker##NM_013314|BLNK|29760|B-cell linker##BC113577|TLL2|7093|tolloid-like 2##BC112341|TLL2|7093|tolloid-like 2##BC112366|TLL2|7093|tolloid-like 2##AB023149|TLL2|7093|tolloid-like 2##BC013871|TLL2|7093|tolloid-like 2##BC030548|TLL2|7093|tolloid-like 2##AK026106|TLL2|7093|tolloid-like 2##NM_012465|TLL2|7093|tolloid-like 2##AK075451|TM9SF3|56889|transmembrane 9 superfamily member 3##AK074824|TM9SF3|56889|transmembrane 9 superfamily member 3	0.998055	CTCF.p2:20:0.998
chr1	157933564	157933653	reg1012683.p1	9.101	+	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	-122046	-	CU689698 AF329488 BC021274 AK315748 AK096690 BC033690 AF459634 AY043464 NM_001159397 NM_001159398 NM_052938	-143723	-	CU686705 AK301113 AY043465 AF459633 AY358130 AK303549 BC069185 NM_030764	-186716	-	AY302131 NM_018240	29454	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	29780	+	BC027926 NM_001766	216128	+	DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like##AF329488|FCRL1|115350|Fc receptor-like 1##BC021274|FCRL1|115350|Fc receptor-like 1##AK315748|FCRL1|115350|Fc receptor-like 1##AK096690|FCRL1|115350|Fc receptor-like 1##BC033690|FCRL1|115350|Fc receptor-like 1##AF459634|FCRL1|115350|Fc receptor-like 1##AY043464|FCRL1|115350|Fc receptor-like 1##NM_001159397|FCRL1|115350|Fc receptor-like 1##NM_001159398|FCRL1|115350|Fc receptor-like 1##NM_052938|FCRL1|115350|Fc receptor-like 1##AK301113|FCRL2|79368|Fc receptor-like 2##AY043465|FCRL2|79368|Fc receptor-like 2##AF459633|FCRL2|79368|Fc receptor-like 2##AY358130|FCRL2|79368|Fc receptor-like 2##AK303549|FCRL2|79368|Fc receptor-like 2##BC069185|FCRL2|79368|Fc receptor-like 2##NM_030764|FCRL2|79368|Fc receptor-like 2##AY302131|KIRREL|55243|kin of IRRE like (Drosophila)##NM_018240|KIRREL|55243|kin of IRRE like (Drosophila)##BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule	0.999739	CTCF.p2:-1:1.000
chr12	55096099	55096260	reg1013663.p1	9.101	+	AY590150 AF144011 BC062682 BC069108 NM_053283 EF503687 EF503688 EF503689	-53974	-	CU686745 CU687522 AF238867 BC069317 NM_033277 BC062217	-67528	-	CR457003 AY063766 U48707 TSC_hg19_v1_chr12_-_54982398 BC022470 NM_006741 AK123969	-113815	-	NM_058173 AF414087 AY359062 BC111421 AY651259	152153	+	BC132732 BC132734 NM_001098815	279442	-	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	282323	-	AY590150|DCD|117159|dermcidin##AF144011|DCD|117159|dermcidin##BC062682|DCD|117159|dermcidin##BC069108|DCD|117159|dermcidin##NM_053283|DCD|117159|dermcidin##EF503687|DCD|117159|dermcidin##EF503688|DCD|117159|dermcidin##EF503689|DCD|117159|dermcidin##AF238867|LACRT|90070|lacritin##BC069317|LACRT|90070|lacritin##NM_033277|LACRT|90070|lacritin##BC062217|LACRT|90070|lacritin##CR457003|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AY063766|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##U48707|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##BC022470|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_006741|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AK123969|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748	0.724089	CTCF.p2:1:0.724
chr7	51498290	51498431	reg1016270.p1	9.101	+	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	-113874	-	AB385366 TSC_hg19_v1_chr7_-_51384416 BC136441 BC144099	-113980	-	TSC_hg19_v1_chr7_-_50861150 NM_001001555	-637206	-	NM_182595	1604988	+	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	3111722	+	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	3328519	-	BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##BC136441|COBL|23242|cordon-bleu homolog (mouse)##BC144099|COBL|23242|cordon-bleu homolog (mouse)##NM_001001555|GRB10|2887|growth factor receptor-bound protein 10##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12##NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit	0.999729	CTCF.p2:-7:1.000
chr15	69768244	69768362	reg1012122.p1	9.100	+	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-23082	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-60941	-	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	-61557	+	BC015421 TSC_hg19_v1_chr15_-_70341948	573606	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	621924	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	621940	-	NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.35885	CTCF.p2:-13:0.359
chr4	56178795	56178932	reg1016369.p1	9.100	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	-187109	-	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	-654729	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-1083399	+	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	33553	+	TSC_hg19_v1_chr4_+_56212475 CU677982 CR457312	33621	+	TSC_hg19_v1_chr4_+_56261819 AK123358	82932	+	AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3##CR457312|SRD5A3|79644|steroid 5 alpha-reductase 3	0.565268	CTCF.p2:-5:0.565
chr17	1162533	1162654	reg1011455.p1	9.099	+	TSC_hg19_v1_chr17_-_1090565 AK126882 AK124547 NM_001159746	-72005	-	AK302682 AB384846 TSC_hg19_v1_chr17_-_1083048 NM_021962 U01147	-79524	-	TSC_hg19_v1_chr17_-_1029059 AK307827	-133519	-	NM_001164405	11264	+	AB090231 NM_172367 BC142615	20371	+	TSC_hg19_v1_chr17_-_1248347 L13388	85763	-	AK126882|ABR|29|active BCR-related gene##AK124547|ABR|29|active BCR-related gene##NM_001159746|ABR|29|active BCR-related gene##AK302682|ABR|29|active BCR-related gene##NM_021962|ABR|29|active BCR-related gene##U01147|ABR|29|active BCR-related gene##AK307827|ABR|29|active BCR-related gene##NM_001164405|BHLHA9|727857|basic helix-loop-helix family, member a9##AB090231|TUSC5|286753|tumor suppressor candidate 5##NM_172367|TUSC5|286753|tumor suppressor candidate 5##BC142615|TUSC5|286753|tumor suppressor candidate 5##L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	0.99868	CTCF.p2:-18:0.999
chr2	11374590	11374743	reg1014234.p2	9.099	+	AK301439 AK313402 TSC_hg19_v1_chr2_+_11295602	-79064	+	TSC_hg19_v1_chr2_+_11295592 AK001091	-79085	+	BC027625 NM_152391 TSC_hg19_v1_chr2_+_11295562	-79115	+	TSC_hg19_v1_chr2_-_11484762 AB014519 NM_004850	110079	-	BC107740 TSC_hg19_v1_chr2_-_11606272 BC008348 BC062610 AK290413 AK293504	231578	-	TSC_hg19_v1_chr2_-_11606278 AK223407 AY083996 NM_198256	231620	-	AK301439|PQLC3|130814|PQ loop repeat containing 3##AK313402|PQLC3|130814|PQ loop repeat containing 3##AK001091|PQLC3|130814|PQ loop repeat containing 3##BC027625|PQLC3|130814|PQ loop repeat containing 3##NM_152391|PQLC3|130814|PQ loop repeat containing 3##AB014519|ROCK2|9475|Rho-associated, coiled-coil containing protein kinase 2##NM_004850|ROCK2|9475|Rho-associated, coiled-coil containing protein kinase 2##BC107740|E2F6|1876|E2F transcription factor 6##BC008348|E2F6|1876|E2F transcription factor 6##BC062610|E2F6|1876|E2F transcription factor 6##AK290413|E2F6|1876|E2F transcription factor 6##AK293504|E2F6|1876|E2F transcription factor 6##AK223407|E2F6|1876|E2F transcription factor 6##AY083996|E2F6|1876|E2F transcription factor 6##NM_198256|E2F6|1876|E2F transcription factor 6	0.468896	CTCF.p2:-16:0.469
chr8	145982635	145982768	reg1016832.p1	9.099	+	TSC_hg19_v1_chr8_-_145980977 NM_138367	-1727	-	TSC_hg19_v1_chr8_-_145980846 AK000435	-1847	-	TSC_hg19_v1_chr8_-_145911232 AK296353	-71474	-	TSC_hg19_v1_chr8_-_146012703 BC004480 AL833814 AK096508 NM_030580	29999	-	TSC_hg19_v1_chr8_-_146017753 BC012197 NM_033301 BC013104 BC000077	35039	-	AK301073 D28421 TSC_hg19_v1_chr8_-_146017776	35075	-	NM_138367|ZNF251|90987|zinc finger protein 251##AK000435|ZNF251|90987|zinc finger protein 251##AK296353|ARHGAP39|80728|Rho GTPase activating protein 39##BC004480|ZNF34|80778|zinc finger protein 34##AL833814|ZNF34|80778|zinc finger protein 34##AK096508|ZNF34|80778|zinc finger protein 34##NM_030580|ZNF34|80778|zinc finger protein 34##BC012197|RPL8|6132|ribosomal protein L8##NM_033301|RPL8|6132|ribosomal protein L8##BC013104|RPL8|6132|ribosomal protein L8##BC000077|RPL8|6132|ribosomal protein L8##AK301073|RPL8|6132|ribosomal protein L8	0.0	
chr11	3829189	3829313	reg1014257.p1	9.098	+	AL096753 NM_001145438 TSC_hg19_v1_chr11_+_3819145 AK307359 AK308525 AK292181 BC009930 AK301991	-10166	+	TSC_hg19_v1_chr11_-_3819023 NM_005387 NM_016320 NM_139131 NM_139132	-10250	-	TSC_hg19_v1_chr11_-_3818785 AF231130 U41815 AK292882 BC041136 AB038155 AB040538 AK301512	-10491	-	NM_014489 AF159615	523	+	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	32904	-	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	32948	-	AL096753|PGAP2|27315|post-GPI attachment to proteins 2##NM_001145438|PGAP2|27315|post-GPI attachment to proteins 2##AK307359|PGAP2|27315|post-GPI attachment to proteins 2##AK292181|PGAP2|27315|post-GPI attachment to proteins 2##BC009930|PGAP2|27315|post-GPI attachment to proteins 2##AK301991|PGAP2|27315|post-GPI attachment to proteins 2##NM_005387|NUP98|4928|nucleoporin 98kDa##NM_016320|NUP98|4928|nucleoporin 98kDa##NM_139131|NUP98|4928|nucleoporin 98kDa##NM_139132|NUP98|4928|nucleoporin 98kDa##AF231130|NUP98|4928|nucleoporin 98kDa##U41815|NUP98|4928|nucleoporin 98kDa##AK292882|NUP98|4928|nucleoporin 98kDa##BC041136|NUP98|4928|nucleoporin 98kDa##AB040538|NUP98|4928|nucleoporin 98kDa##AK301512|NUP98|4928|nucleoporin 98kDa##NM_014489|PGAP2|27315|post-GPI attachment to proteins 2##AF159615|PGAP2|27315|post-GPI attachment to proteins 2##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)	0.773375	CTCF.p2:-7:0.773
chr5	5497400	5497508	reg1012991.p1	9.098	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	-74545	+	TSC_hg19_v1_chr5_+_5422777 AK126937	-74679	+	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	-356943	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	881196	-	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	951399	+	TSC_hg19_v1_chr5_+_6449114 AK057805	951735	+	AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1	0.032872	
chr17	10779449	10779572	reg1014462.p1	9.097	+	AK021549 TSC_hg19_v1_chr17_-_10741398 AK299808 NM_001101387	-38103	-	AY550194 NM_001004313	-145865	-	NM_020233 BC070155 AB073393 AK292629 BC001294	-178562	+	NM_001173461 NM_001173462 NM_207386	365229	+	AK094349 TSC_hg19_v1_chr17_+_11465221 BC105704 BC105705 BC105707 BC105706	685686	+	AJ404468 NM_001372 AF257737 AK055990 AK310137	722257	+	AK021549|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##AK299808|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##NM_001101387|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##AY550194|TMEM220|388335|transmembrane protein 220##NM_001004313|TMEM220|388335|transmembrane protein 220##NM_020233|C17orf48|56985|chromosome 17 open reading frame 48##BC070155|C17orf48|56985|chromosome 17 open reading frame 48##AB073393|C17orf48|56985|chromosome 17 open reading frame 48##AK292629|C17orf48|56985|chromosome 17 open reading frame 48##BC001294|C17orf48|56985|chromosome 17 open reading frame 48##NM_001173461|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_001173462|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_207386|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##AK094349|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105704|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105705|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105707|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105706|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##AJ404468|DNAH9|1770|dynein, axonemal, heavy chain 9##NM_001372|DNAH9|1770|dynein, axonemal, heavy chain 9##AF257737|DNAH9|1770|dynein, axonemal, heavy chain 9##AK055990|DNAH9|1770|dynein, axonemal, heavy chain 9##AK310137|DNAH9|1770|dynein, axonemal, heavy chain 9	0.997609	CTCF.p2:-36:0.998
chr5	87976355	87976457	reg1010357.p1	9.097	+	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	-7261	-	BC047059 TSC_hg19_v1_chr5_+_87564842	-411557	+	TSC_hg19_v1_chr5_+_87564773 BC030122	-411650	+	TSC_hg19_v1_chr5_-_87980643 AK125167	4301	-	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	143267	-	TSC_hg19_v1_chr5_-_88179002 AK312472 L08895 AK307883 BC026341	202600	-	AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##BC047059|LOC100505894|100505894|uncharacterized LOC100505894##BC030122|LOC100505894|100505894|uncharacterized LOC100505894##EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C##AK312472|MEF2C|4208|myocyte enhancer factor 2C##L08895|MEF2C|4208|myocyte enhancer factor 2C##AK307883|MEF2C|4208|myocyte enhancer factor 2C##BC026341|MEF2C|4208|myocyte enhancer factor 2C	0.976549	CTCF.p2:12:0.977
chrX	56804926	56805093	reg1013440.p2	9.097	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-49318	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-214958	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-546099	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	216962	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	342919	-	BC071694 NM_019003	359048	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.740395	CTCF.p2:34:0.740
chr11	119209116	119209261	reg1015266.p1	9.096	+	TSC_hg19_v1_chr11_+_119205234 BX648447 AK122642 BX647424 NM_032015	-3957	+	AB527309 EU832794 GQ129330 TSC_hg19_v1_chr11_-_119187841 BC006329 M28882 M29277 AF089868 BC056418 AK128335 AK291571 AK312430 NM_006500 AB209925	-21347	-	TSC_hg19_v1_chr11_+_119077024 BC132733 BC136463	-132148	+	AL110261 AB590791 TSC_hg19_v1_chr11_-_119211170	1914	-	TSC_hg19_v1_chr11_-_119211575 AF329841 AY358383 BC029485	2394	-	AJ862823 BC036675 AB055505 AK295203 AK055132 NM_015645 NM_031433	8185	-	BX648447|RNF26|79102|ring finger protein 26##AK122642|RNF26|79102|ring finger protein 26##BX647424|RNF26|79102|ring finger protein 26##NM_032015|RNF26|79102|ring finger protein 26##EU832794|MCAM|4162|melanoma cell adhesion molecule##GQ129330|MCAM|4162|melanoma cell adhesion molecule##M28882|MCAM|4162|melanoma cell adhesion molecule##M29277|MCAM|4162|melanoma cell adhesion molecule##AF089868|MCAM|4162|melanoma cell adhesion molecule##BC056418|MCAM|4162|melanoma cell adhesion molecule##AK128335|MCAM|4162|melanoma cell adhesion molecule##AK291571|MCAM|4162|melanoma cell adhesion molecule##AK312430|MCAM|4162|melanoma cell adhesion molecule##NM_006500|MCAM|4162|melanoma cell adhesion molecule##AB209925|MCAM|4162|melanoma cell adhesion molecule##BC132733|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##BC136463|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##AL110261|MFRP|83552|membrane frizzled-related protein##AF329841|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##AY358383|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##BC029485|MFRP|83552|membrane frizzled-related protein##AJ862823|MFRP|83552|membrane frizzled-related protein##BC036675|MFRP|83552|membrane frizzled-related protein##AB055505|MFRP|83552|membrane frizzled-related protein##AK295203|MFRP|83552|membrane frizzled-related protein##AK055132|MFRP|83552|membrane frizzled-related protein##NM_015645|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##NM_031433|MFRP|83552|membrane frizzled-related protein	0.991231	CTCF.p2:-1:0.991
chr11	30218277	30218411	reg1016164.p1	9.096	+	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	-179813	-	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-2086491	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-2088466	+	NM_000510 NM_001018080	34218	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	126308	+	CU689190 NM_001584 U57911	383635	-	M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46##NM_001584|MPPED2|744|metallophosphoesterase domain containing 2##U57911|MPPED2|744|metallophosphoesterase domain containing 2	0.998375	CTCF.p2:1:0.998
chr13	92059046	92059164	reg1014370.p1	9.096	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-8201	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3734236	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5685666	-	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1820322	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3072721	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	3189324	-	BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase	0.998385	CTCF.p2:5:0.998
chr1	41314345	41314456	reg1014694.p1	9.096	+	TSC_hg19_v1_chr1_+_41284599 AK074957	-29783	+	TSC_hg19_v1_chr1_+_41249485 AF105202 NM_004700 NM_172163	-64819	+	AF191744 AB385526 BT020081 U62296 TSC_hg19_v1_chr1_+_41204591	-109850	+	TSC_hg19_v1_chr1_-_41328006 BC052559 NM_133467	13609	-	BC035496 TSC_hg19_v1_chr1_-_41328020	13620	-	TSC_hg19_v1_chr1_+_41444968 NM_001905	130587	+	AK074957|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##AF105202|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_004700|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_172163|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##AF191744|NFYC|4802|nuclear transcription factor Y, gamma##BT020081|NFYC|4802|nuclear transcription factor Y, gamma##U62296|NFYC|4802|nuclear transcription factor Y, gamma##BC052559|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##NM_133467|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##BC035496|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##NM_001905|CTPS|1503|CTP synthase	0.267392	CTCF.p2:-8:0.267
chr14	23797358	23797477	reg1014272.p1	9.096	+	TSC_hg19_v1_chr14_+_23790671 BX247976 BC010939	-6743	+	NM_004643	-8021	+	NM_001199864 NM_004050 AK289519 TSC_hg19_v1_chr14_+_23776072 BC104789 BC113522 D87461 BC011637 NM_001199839	-21373	+	AB529096 DQ658848 BC020565 NM_020372	24033	-	TSC_hg19_v1_chr14_-_23822095 BX161416 NM_016609 BC030559	24658	-	CU689846 AB527771 TSC_hg19_v1_chr14_-_23834325	36884	-	BX247976|PABPN1|8106|poly(A) binding protein, nuclear 1##BC010939|PABPN1|8106|poly(A) binding protein, nuclear 1##NM_004643|PABPN1|8106|poly(A) binding protein, nuclear 1##NM_001199864|BCL2L2-PABPN1|100529063|BCL2L2-PABPN1 readthrough##NM_004050|BCL2L2|599|BCL2-like 2##AK289519|BCL2L2|599|BCL2-like 2##BC104789|BCL2L2|599|BCL2-like 2##BC113522|BCL2L2|599|BCL2-like 2##D87461|BCL2L2|599|BCL2-like 2##BC011637|BCL2L2-PABPN1|100529063|BCL2L2-PABPN1 readthrough##NM_001199839|BCL2L2|599|BCL2-like 2##DQ658848|SLC22A17|51310|solute carrier family 22, member 17##BC020565|SLC22A17|51310|solute carrier family 22, member 17##NM_020372|SLC22A17|51310|solute carrier family 22, member 17##BX161416|SLC22A17|51310|solute carrier family 22, member 17##NM_016609|SLC22A17|51310|solute carrier family 22, member 17##BC030559|SLC22A17|51310|solute carrier family 22, member 17	0.999903	CTCF.p2:5:1.000
chr15	92249804	92249907	reg1014270.p1	9.096	+	AB018278 TSC_hg19_v1_chr15_+_91769341 CR457086 DQ891614 EU176590	-480444	+	TSC_hg19_v1_chr15_+_91643558 AF052188	-606296	+	TSC_hg19_v1_chr15_+_91643505 NM_014848 BC030011	-606369	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	147088	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	147242	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	147712	+	AB018278|SV2B|9899|synaptic vesicle glycoprotein 2B##CR457086|SV2B|9899|synaptic vesicle glycoprotein 2B##DQ891614|SV2B|9899|synaptic vesicle glycoprotein 2B##EU176590|SV2B|9899|synaptic vesicle glycoprotein 2B##AF052188|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_014848|SV2B|9899|synaptic vesicle glycoprotein 2B##BC030011|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	0.983844	CTCF.p2:-6:0.984
chr5	34538211	34538334	reg1016027.p1	9.096	+	EU399231 EU399232 BC112925 AF329837 BC120990 AF326976 AY358388 AK075533 BX640995 AK315921 AK295968 NM_030945 NM_181435	-494970	-	TSC_hg19_v1_chr5_-_34008240 AK225749	-530028	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	-530109	-	TSC_hg19_v1_chr5_+_34656432 NM_001145522 NM_015577	118141	+	TSC_hg19_v1_chr5_+_34656506 BC052988 AF155135 AK314379	118240	+	AB037755 NM_001145520 TSC_hg19_v1_chr5_+_34656599	118325	+	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK225749|AMACR|23600|alpha-methylacyl-CoA racemase##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001145522|RAI14|26064|retinoic acid induced 14##NM_015577|RAI14|26064|retinoic acid induced 14##BC052988|RAI14|26064|retinoic acid induced 14##AF155135|RAI14|26064|retinoic acid induced 14##AK314379|RAI14|26064|retinoic acid induced 14##AB037755|RAI14|26064|retinoic acid induced 14##NM_001145520|RAI14|26064|retinoic acid induced 14	0.506989	CTCF.p2:8:0.507
chr7	116166267	116166405	reg1015914.p1	9.096	+	TSC_hg19_v1_chr7_+_116165089 Z18951 BC082246 DQ890647 DQ893827 EU176473 AB489179 AM393679 AB451284 AB451416 BT007143	-1234	+	BC009685 TSC_hg19_v1_chr7_+_116165054 BC006432 NM_001172895 AY762103	-1278	+	NM_001753 AK290871	-1496	+	NM_001172896 TSC_hg19_v1_chr7_+_116166415 AF172085 NM_001172897 AK307501 EF649773 EF649774 AB209926	68	+	TSC_hg19_v1_chr7_+_116312490 EU176015 J02958 NM_000245 NM_001127500 X54559 DQ656040 BC130420 AK309532	146136	+	AK296974 TSC_hg19_v1_chr7_+_116364175	197839	+	Z18951|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC082246|CAV1|857|caveolin 1, caveolae protein, 22kDa##DQ890647|CAV1|857|caveolin 1, caveolae protein, 22kDa##DQ893827|CAV1|857|caveolin 1, caveolae protein, 22kDa##EU176473|CAV1|857|caveolin 1, caveolae protein, 22kDa##AM393679|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB451284|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB451416|CAV1|857|caveolin 1, caveolae protein, 22kDa##BT007143|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC009685|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC006432|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172895|CAV1|857|caveolin 1, caveolae protein, 22kDa##AY762103|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001753|CAV1|857|caveolin 1, caveolae protein, 22kDa##AK290871|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172896|CAV1|857|caveolin 1, caveolae protein, 22kDa##AF172085|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172897|CAV1|857|caveolin 1, caveolae protein, 22kDa##AK307501|CAV1|857|caveolin 1, caveolae protein, 22kDa##EF649773|CAV1|857|caveolin 1, caveolae protein, 22kDa##EF649774|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB209926|CAV1|857|caveolin 1, caveolae protein, 22kDa##EU176015|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK296974|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	0.435282	CTCF.p2:-21:0.435
chr7	133427614	133427751	reg1017355.p1	9.095	+	TSC_hg19_v1_chr7_+_132937838 NM_001037126 NM_021807 AF380839 AK027688 AL831989 AK298191 BC067263 BC026174 CU693148 AB051486	-489833	+	TSC_hg19_v1_chr7_-_132766851 BC011596 BC014839 AK129533	-660836	-	AB528286 TSC_hg19_v1_chr7_-_132766813 AK294071 AK000427 NM_017812 AK310236	-660918	-	BC104897 BC104899 AK057348 NM_144648	384395	+	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	573941	-	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	574105	-	NM_001037126|EXOC4|60412|exocyst complex component 4##NM_021807|EXOC4|60412|exocyst complex component 4##AF380839|EXOC4|60412|exocyst complex component 4##AK027688|EXOC4|60412|exocyst complex component 4##AL831989|EXOC4|60412|exocyst complex component 4##AK298191|EXOC4|60412|exocyst complex component 4##BC067263|EXOC4|60412|exocyst complex component 4##BC026174|EXOC4|60412|exocyst complex component 4##AB051486|EXOC4|60412|exocyst complex component 4##BC011596|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC014839|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK129533|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK294071|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK000427|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##NM_017812|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK310236|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4	0.999008	CTCF.p2:1:0.999
chr7	64411766	64411893	reg1015740.p1	9.094	+	NM_021148 BC007078 BC019234 BC008386 BC063818 BC108740	-48170	+	AK090648 AX746558 TSC_hg19_v1_chr7_+_64342925	-68927	+	TSC_hg19_v1_chr7_+_64254799 NM_001160183 NM_006524 AK294302 AK298230 AK055644 BC141847 BC037426	-157014	+	M55422 NM_015852	39584	-	TSC_hg19_v1_chr7_-_64467066 AK295189 AK097499 NM_001007253	55235	-	TSC_hg19_v1_chr7_+_64498727 BX649060 BC071617	86877	+	NM_021148|ZNF273|10793|zinc finger protein 273##BC007078|ZNF273|10793|zinc finger protein 273##BC019234|ZNF273|10793|zinc finger protein 273##BC008386|ZNF273|10793|zinc finger protein 273##BC063818|ZNF273|10793|zinc finger protein 273##BC108740|ZNF273|10793|zinc finger protein 273##AK090648|ZNF273|10793|zinc finger protein 273##NM_001160183|ZNF138|7697|zinc finger protein 138##NM_006524|ZNF138|7697|zinc finger protein 138##AK294302|ZNF138|7697|zinc finger protein 138##AK298230|ZNF138|7697|zinc finger protein 138##AK055644|ZNF138|7697|zinc finger protein 138##BC141847|ZNF138|7697|zinc finger protein 138##BC037426|ZNF138|7697|zinc finger protein 138##M55422|ZNF117|51351|zinc finger protein 117##NM_015852|ZNF117|51351|zinc finger protein 117##AK295189|ERV3-1|2086|endogenous retrovirus group 3, member 1##NM_001007253|ERV3-1|2086|endogenous retrovirus group 3, member 1##BX649060|CCT6P3|643180|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 3##BC071617|CCT6P3|643180|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 3	0.359941	CTCF.p2:-6:0.360
chr17	46102557	46102674	reg1012513.p1	9.093	+	AF343090 TSC_hg19_v1_chr17_+_46048487 AF110322 AK225274 BC072435 AB062433 BC009957	-54121	+	TSC_hg19_v1_chr17_+_46048471 AF217982 AK023722	-54146	+	AK223387 NM_176096 TSC_hg19_v1_chr17_+_46048452	-54183	+	TSC_hg19_v1_chr17_-_46115160 AB590254 DQ893053 DQ896301 AB047849 BC015924 AB037938 NM_016429	12535	-	TSC_hg19_v1_chr17_+_46125712 NM_003204 BC010623 AK090459	23084	+	AL833530 TSC_hg19_v1_chr17_+_46125724	23109	+	AF343090|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF110322|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK225274|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC072435|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AB062433|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC009957|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF217982|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK023722|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK223387|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##NM_176096|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##DQ893053|COPZ2|51226|coatomer protein complex, subunit zeta 2##DQ896301|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB047849|COPZ2|51226|coatomer protein complex, subunit zeta 2##BC015924|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB037938|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_016429|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	0.968439	CTCF.p2:5:0.968
chr5	82769462	82769610	reg1014226.p1	9.093	+	NM_001126336 NM_001164097 NM_001164098 NM_004385 TSC_hg19_v1_chr5_+_82767562 U16306 U26555 X15998 AK307642 AB209491 BC050524 D32039	-1919	+	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	-396153	+	TSC_hg19_v1_chr5_-_82373255 NM_174909	-396274	-	AK313713 NM_001884 X17405 X78076 X78075	247398	-	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	910710	-	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	911128	-	NM_001126336|VCAN|1462|versican##NM_001164097|VCAN|1462|versican##NM_001164098|VCAN|1462|versican##NM_004385|VCAN|1462|versican##U16306|VCAN|1462|versican##U26555|VCAN|1462|versican##X15998|VCAN|1462|versican##AK307642|VCAN|1462|versican##AB209491|VCAN|1462|versican##BC050524|VCAN|1462|versican##D32039|VCAN|1462|versican##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_174909|TMEM167A|153339|transmembrane protein 167A##AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	0.891272	CTCF.p2:12:0.891
chr10	24846206	24846314	reg1014092.p2	9.092	+	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	-90791	+	TSC_hg19_v1_chr10_+_24755441 AK300422	-90816	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	-348166	+	AK307604 TSC_hg19_v1_chr10_-_25012174	165913	-	AF480466 NM_020824 TSC_hg19_v1_chr10_-_25012632	166346	-	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	395272	-	BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217##AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21##AF480466|ARHGAP21|57584|Rho GTPase activating protein 21##NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21##AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	0.999546	CTCF.p2:9:1.000
chr11	116370240	116370346	reg1012776.p2	9.092	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-995113	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-1281645	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1821045	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	273405	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	288422	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	288445	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.987402	CTCF.p2:2:0.987
chr12	39058593	39058723	reg1015477.p1	9.090	+	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-348033	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-4883185	+	TSC_hg19_v1_chr12_+_34175402 BC022336	-4883272	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	240725	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	778341	-	AK314254 NM_005164	955184	-	NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC022336|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2	0.732025	CTCF.p2:5:0.732
chr5	9156488	9156621	reg1016294.p1	9.090	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-1287244	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-1287295	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-1287422	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	389640	-	BC095521 NM_019599	473908	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	1093430	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.959216	CTCF.p2:1:0.959
chr22	42948163	42948269	reg1009934.p2	9.088	+	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	-32402	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	-32449	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	-119835	-	BC041802 AK294584 AL450314 NM_014509 AK295223 BC119650 BC119651 BC127635 BC127636 CR456455 AL589866 AL590118 AL590120 CU013005 CU013293	1730	+	AL157851 TSC_hg19_v1_chr22_-_42978018 BC014647 BC007736 BC053540 AK098201 BC143340	29836	-	TSC_hg19_v1_chr22_-_43010884 BC001488 AB385492 AY506562 CU013006 CU013294 CU676456 AK291774 AK303419 AB055760 BC056912 AL137743 BC049840 AL160111 AL160112 AK291623	62647	-	BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##AK294584|SERHL2|253190|serine hydrolase-like 2##AL450314|SERHL2|253190|serine hydrolase-like 2##NM_014509|SERHL2|253190|serine hydrolase-like 2##AK295223|SERHL2|253190|serine hydrolase-like 2##BC119650|SERHL2|253190|serine hydrolase-like 2##BC119651|SERHL2|253190|serine hydrolase-like 2##BC127635|SERHL2|253190|serine hydrolase-like 2##BC127636|SERHL2|253190|serine hydrolase-like 2##CR456455|SERHL2|253190|serine hydrolase-like 2##AL589866|SERHL2|253190|serine hydrolase-like 2##AL590118|SERHL2|253190|serine hydrolase-like 2##AL590120|SERHL2|253190|serine hydrolase-like 2##CU013005|SERHL2|253190|serine hydrolase-like 2##CU013293|SERHL2|253190|serine hydrolase-like 2##AL157851|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC014647|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC007736|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC053540|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##AK098201|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC143340|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC001488|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AY506562|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CU013006|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CU013294|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK291774|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK303419|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AB055760|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##BC056912|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL137743|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##BC049840|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL160111|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL160112|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK291623|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3	0.830068	CTCF.p2:6:0.830
chr2	42997803	42997946	reg1017348.p1	9.088	+	AY158687 AB528920 AB083055 BC063549 NM_148962	-6574	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-201977	+	TSC_hg19_v1_chr2_+_42795781 BC053631 NM_020744 BC004227	-202153	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	21877	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	455471	-	TSC_hg19_v1_chr2_-_43453736 BC020369	455856	-	AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##BC053631|MTA3|57504|metastasis associated 1 family, member 3##NM_020744|MTA3|57504|metastasis associated 1 family, member 3##BC004227|MTA3|57504|metastasis associated 1 family, member 3##CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.0	
chr4	81105352	81105497	reg1010934.p1	9.088	+	TSC_hg19_v1_chr4_-_80994394 NM_001145794 NM_058172 BC107876	-110957	-	TSC_hg19_v1_chr4_-_80994237 AK091721 AX747144	-111187	-	AB527650 AY233452 TSC_hg19_v1_chr4_-_80993874 AY040326 BC114374 AB209913	-111536	-	AF275815 NM_020226	999	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	13230	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	82435	+	NM_001145794|ANTXR2|118429|anthrax toxin receptor 2##NM_058172|ANTXR2|118429|anthrax toxin receptor 2##BC107876|ANTXR2|118429|anthrax toxin receptor 2##AY233452|ANTXR2|118429|anthrax toxin receptor 2##AY040326|ANTXR2|118429|anthrax toxin receptor 2##BC114374|ANTXR2|118429|anthrax toxin receptor 2##AB209913|ANTXR2|118429|anthrax toxin receptor 2##AF275815|PRDM8|56978|PR domain containing 8##NM_020226|PRDM8|56978|PR domain containing 8##NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5	0.998601	CTCF.p2:-33:0.999
chr5	96023679	96023810	reg1016342.p1	9.088	+	TSC_hg19_v1_chr5_+_95998728 AK296919	-25027	+	BC013579 TSC_hg19_v1_chr5_+_95998220	-25549	+	TSC_hg19_v1_chr5_+_95997965 BC016066 NM_001042440	-25816	+	NM_173060 AL832349 AB026049 AK303900 TSC_hg19_v1_chr5_+_96038509 AK298541 AK299402 AK300624 AK314290 AK315146 AL832174 BX648397 AK303836 AK297879	14791	+	TSC_hg19_v1_chr5_-_96143614 AF106037 AF183569 AF222340 AY358590 AK291636 AY028806 AY028807	119878	-	TSC_hg19_v1_chr5_-_96143701 NM_001040458 NM_016442	120046	-	AK296919|CAST|831|calpastatin##BC013579|CAST|831|calpastatin##BC016066|CAST|831|calpastatin##NM_001042440|CAST|831|calpastatin##NM_173060|CAST|831|calpastatin##AL832349|CAST|831|calpastatin##AB026049|CAST|831|calpastatin##AK303900|CAST|831|calpastatin##AK298541|CAST|831|calpastatin##AK299402|CAST|831|calpastatin##AK300624|CAST|831|calpastatin##AK314290|CAST|831|calpastatin##AK315146|CAST|831|calpastatin##AL832174|CAST|831|calpastatin##BX648397|CAST|831|calpastatin##AK303836|CAST|831|calpastatin##AK297879|CAST|831|calpastatin##AF106037|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AF183569|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AF222340|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AY358590|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AK291636|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AY028806|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AY028807|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_001040458|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_016442|ERAP1|51752|endoplasmic reticulum aminopeptidase 1	0.0	
chr6	105851368	105851544	reg1014592.p2	9.088	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-461	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-498	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-610	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	682740	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	682779	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	695348	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.0	
chrX	56800294	56800420	reg1013494.p3	9.088	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-44666	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-210306	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-541447	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	221614	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	347571	-	BC071694 NM_019003	363700	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.488383	CTCF.p2:-23:0.447
chr17	9632488	9632618	reg1014311.p1	9.087	+	BC136368 BC144041 BC171759 AJ583817 NM_153210	-83652	+	NM_001080556 NM_145054 AK074435 AB065281 BC025392 AK094847 AK315679 CU692990	-152576	+	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	-153347	-	BC147024 BC147025 BC171909 NM_001105571 NM_001220493	62060	-	AF105367 BC096261 BC096262 BC096264 NM_004246 BC096263	96829	+	TSC_hg19_v1_chr17_+_9745847 BC041176 BC019818	113306	+	BC136368|USP43|124739|ubiquitin specific peptidase 43##BC144041|USP43|124739|ubiquitin specific peptidase 43##BC171759|USP43|124739|ubiquitin specific peptidase 43##AJ583817|USP43|124739|ubiquitin specific peptidase 43##NM_153210|USP43|124739|ubiquitin specific peptidase 43##NM_001080556|WDR16|146845|WD repeat domain 16##NM_145054|WDR16|146845|WD repeat domain 16##AK074435|WDR16|146845|WD repeat domain 16##AB065281|WDR16|146845|WD repeat domain 16##BC025392|WDR16|146845|WD repeat domain 16##AK094847|WDR16|146845|WD repeat domain 16##AK315679|WDR16|146845|WD repeat domain 16##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8##BC147024|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##BC147025|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##BC171909|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##NM_001105571|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##NM_001220493|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##AF105367|GLP2R|9340|glucagon-like peptide 2 receptor##BC096261|GLP2R|9340|glucagon-like peptide 2 receptor##BC096262|GLP2R|9340|glucagon-like peptide 2 receptor##BC096264|GLP2R|9340|glucagon-like peptide 2 receptor##NM_004246|GLP2R|9340|glucagon-like peptide 2 receptor##BC096263|GLP2R|9340|glucagon-like peptide 2 receptor##BC041176|GLP2R|9340|glucagon-like peptide 2 receptor##BC019818|GLP2R|9340|glucagon-like peptide 2 receptor	0.708181	CTCF.p2:-6:0.708
chr3	35950014	35950123	reg1014718.p1	9.087	+	BC017805 NM_198399 BC066651 BC036548	-227609	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	-228872	+	BC051828 NM_016300	-266220	+	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	471984	+	NM_033403	831283	-	TSC_hg19_v1_chr3_-_36986546 NM_014831	1036502	-	BC017805|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_198399|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC066651|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC036548|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain##NM_033403|DCLK3|85443|doublecortin-like kinase 3##NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1	0.997494	CTCF.p2:2:0.997
chr12	24881457	24881574	reg1014565.p1	9.086	+	BC104436 BC104437 TSC_hg19_v1_chr12_-_24737100 AK057456	-144422	-	TSC_hg19_v1_chr12_-_24715349 AB081588 NM_152989 BC060773	-166150	-	BC014929 TSC_hg19_v1_chr12_-_24103967 AK303970	-777554	-	TSC_hg19_v1_chr12_-_25055230 CR749308 BC033864 NM_001178094	173759	-	TSC_hg19_v1_chr12_-_25055966 AK294879 NM_001178093	174472	-	TSC_hg19_v1_chr12_-_25101988 AK299088	220441	-	BC104436|LINC00477|144360|long intergenic non-protein coding RNA 477##BC104437|LINC00477|144360|long intergenic non-protein coding RNA 477##AK057456|LINC00477|144360|long intergenic non-protein coding RNA 477##AB081588|SOX5|6660|SRY (sex determining region Y)-box 5##NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5##BC060773|SOX5|6660|SRY (sex determining region Y)-box 5##BC014929|SOX5|6660|SRY (sex determining region Y)-box 5##AK303970|SOX5|6660|SRY (sex determining region Y)-box 5##CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK294879|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178093|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK299088|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	0.595185	CTCF.p2:-13:0.595
chr4	53242411	53242560	reg1013085.p1	9.086	+	TSC_hg19_v1_chr4_+_52917480 AK304386 AK057468 BC025396 NM_145263 AK314799	-324952	+	BT019433 CR456810 DQ893140 DQ896425 EU176433 U29586 TSC_hg19_v1_chr4_-_52904447 AK299765 BC020709 AK289892 U31116 NM_000232	-338028	-	CR749811 NM_001024611	-358700	-	AK302438 NM_001134223	280272	-	DQ896764 EU176797 GU455414 AK022614 TSC_hg19_v1_chr4_-_53525461 AK299883 BC037574 AK024318 AK296493 NM_022832	282924	-	TSC_hg19_v1_chr4_+_53578670 BC045566 BC015222 D28589	336179	+	AK304386|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK057468|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BC025396|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##NM_145263|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK314799|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BT019433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR456810|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ893140|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ896425|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##EU176433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U29586|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK299765|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##BC020709|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK289892|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U31116|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##NM_000232|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR749811|LRRC66|339977|leucine rich repeat containing 66##NM_001024611|LRRC66|339977|leucine rich repeat containing 66##AK302438|USP46|64854|ubiquitin specific peptidase 46##NM_001134223|USP46|64854|ubiquitin specific peptidase 46##DQ896764|USP46|64854|ubiquitin specific peptidase 46##EU176797|USP46|64854|ubiquitin specific peptidase 46##GU455414|USP46|64854|ubiquitin specific peptidase 46##AK022614|USP46|64854|ubiquitin specific peptidase 46##AK299883|USP46|64854|ubiquitin specific peptidase 46##BC037574|USP46|64854|ubiquitin specific peptidase 46##AK024318|USP46|64854|ubiquitin specific peptidase 46##AK296493|USP46|64854|ubiquitin specific peptidase 46##NM_022832|USP46|64854|ubiquitin specific peptidase 46##BC045566|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)##BC015222|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)##D28589|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)	0.999926	CTCF.p2:-24:1.000
chr6	142433723	142433848	reg1013762.p2	9.086	+	BC095542 GU727635 M73482 NM_002511	-23921	-	NM_006079 TSC_hg19_v1_chr6_-_139695784	-2738001	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-2738024	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	34605	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	34621	+	BC005937 TSC_hg19_v1_chr6_+_142468418 AF141341 AB464348 CR457207 CU692682 DQ893520 DQ896504 AJ420507	34637	+	BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC005937|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF141341|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR457207|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##DQ893520|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##DQ896504|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AJ420507|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.884721	CTCF.p2:1:0.885
chr1	21922157	21922284	reg1013913.p1	9.085	+	TSC_hg19_v1_chr1_+_21835918 AK295608 AK312667 AK298085 BC021289 BC066116 BC090861 AB011406 AH007388 X95994 AK293184 BC110909	-86288	+	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	-86361	+	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	-155538	+	AB003930 TSC_hg19_v1_chr1_-_21949064	26817	-	BC054490 TSC_hg19_v1_chr1_-_21978334 NM_001145658	56127	-	AB007943 M64788 TSC_hg19_v1_chr1_-_21995851 NM_001145657 NM_002885	73613	-	AK295608|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK312667|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK298085|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC021289|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC066116|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC090861|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB011406|ALPL|249|alkaline phosphatase, liver/bone/kidney##X95994|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK293184|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC110909|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein##BC054490|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145658|RAP1GAP|5909|RAP1 GTPase activating protein##AB007943|RAP1GAP|5909|RAP1 GTPase activating protein##M64788|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145657|RAP1GAP|5909|RAP1 GTPase activating protein##NM_002885|RAP1GAP|5909|RAP1 GTPase activating protein	0.960975	CTCF.p2:-6:0.961
chr3	158563700	158563832	reg1013630.p1	9.085	+	TSC_hg19_v1_chr3_+_158519925 AK301680	-43832	+	AK024215 AK300497 TSC_hg19_v1_chr3_+_158519911	-43850	+	TSC_hg19_v1_chr3_+_158519899 AK297034 BC042197	-43871	+	NM_001042705 NM_001042706 NM_001197100 NM_001197113 NM_001197114 AK309049 DQ309553 DQ309554 TSC_hg19_v1_chr3_+_158787130 AK096479	223321	+	TSC_hg19_v1_chr3_+_158787146 BC137464 BC137469 BC144658	223385	+	BC036535 NM_001197107 NM_001197108 NM_014575 TSC_hg19_v1_chr3_+_158991047	427276	+	AK301680|MFSD1|64747|major facilitator superfamily domain containing 1##AK024215|MFSD1|64747|major facilitator superfamily domain containing 1##AK300497|MFSD1|64747|major facilitator superfamily domain containing 1##AK297034|MFSD1|64747|major facilitator superfamily domain containing 1##BC042197|MFSD1|64747|major facilitator superfamily domain containing 1##NM_001042705|IQCJ|654502|IQ motif containing J##NM_001042706|IQCJ|654502|IQ motif containing J##NM_001197100|IQCJ|654502|IQ motif containing J##NM_001197113|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##NM_001197114|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##AK309049|IQCJ|654502|IQ motif containing J##DQ309553|IQCJ|654502|IQ motif containing J##DQ309554|IQCJ|654502|IQ motif containing J##AK096479|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##BC137464|IQCJ|654502|IQ motif containing J##BC137469|IQCJ|654502|IQ motif containing J##BC144658|IQCJ|654502|IQ motif containing J##BC036535|SCHIP1|29970|schwannomin interacting protein 1##NM_001197107|SCHIP1|29970|schwannomin interacting protein 1##NM_001197108|SCHIP1|29970|schwannomin interacting protein 1##NM_014575|SCHIP1|29970|schwannomin interacting protein 1	0.998896	CTCF.p2:-31:0.999
chr5	96088286	96088412	reg1012979.p1	9.085	+	NM_173060 AL832349 AB026049 AK303900 TSC_hg19_v1_chr5_+_96038509 AK298541 AK299402 AK300624 AK314290 AK315146 AL832174 BX648397 AK303836 AK297879	-49814	+	TSC_hg19_v1_chr5_+_95998728 AK296919	-89632	+	BC013579 TSC_hg19_v1_chr5_+_95998220	-90154	+	TSC_hg19_v1_chr5_-_96143614 AF106037 AF183569 AF222340 AY358590 AK291636 AY028806 AY028807	55273	-	TSC_hg19_v1_chr5_-_96143701 NM_001040458 NM_016442	55441	-	AK310535 BC030775 NM_001198541	61476	-	NM_173060|CAST|831|calpastatin##AL832349|CAST|831|calpastatin##AB026049|CAST|831|calpastatin##AK303900|CAST|831|calpastatin##AK298541|CAST|831|calpastatin##AK299402|CAST|831|calpastatin##AK300624|CAST|831|calpastatin##AK314290|CAST|831|calpastatin##AK315146|CAST|831|calpastatin##AL832174|CAST|831|calpastatin##BX648397|CAST|831|calpastatin##AK303836|CAST|831|calpastatin##AK297879|CAST|831|calpastatin##AK296919|CAST|831|calpastatin##BC013579|CAST|831|calpastatin##AF106037|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AF183569|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AF222340|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AY358590|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AK291636|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AY028806|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AY028807|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_001040458|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_016442|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AK310535|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##BC030775|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_001198541|ERAP1|51752|endoplasmic reticulum aminopeptidase 1	0.994973	CTCF.p2:-8:0.995
chr6	133284244	133284361	reg1012901.p2	9.085	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	-148583	+	TSC_hg19_v1_chr6_+_133135707 AK096147 NM_001016 D28378 X53505	-148595	+	AK124442 BC069570 AK293853 TSC_hg19_v1_chr6_-_133119740 NM_052831 AK289918	-164601	-	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	278189	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	278230	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	925952	+	AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##AK096147|SNORA33|594839|small nucleolar RNA, H/ACA box 33##NM_001016|RPS12|6206|ribosomal protein S12##D28378|RPS12|6206|ribosomal protein S12##X53505|RPS12|6206|ribosomal protein S12##AK124442|C6orf192|116843|chromosome 6 open reading frame 192##BC069570|C6orf192|116843|chromosome 6 open reading frame 192##AK293853|C6orf192|116843|chromosome 6 open reading frame 192##NM_052831|C6orf192|116843|chromosome 6 open reading frame 192##AK289918|C6orf192|116843|chromosome 6 open reading frame 192##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21	0.995536	CTCF.p2:0:0.996
chr10	32097712	32097819	reg1011228.p2	9.083	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-487676	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-489632	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-489808	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	119959	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	120020	-	TSC_hg19_v1_chr10_-_32344938 AB462413	247167	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.994006	CTCF.p2:15:0.994
chr12	98791420	98791542	reg1013794.p2	9.082	+	BC027605 NM_001135175	-1490238	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-1490450	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-1997164	-	TSC_hg19_v1_chr12_-_98897622 AK126817	106146	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	117886	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	117926	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.993163	CTCF.p2:1:0.993
chr13	32316378	32316493	reg1014399.p2	9.082	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-2722	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-542225	+	TSC_hg19_v1_chr13_+_31774111 NM_194318	-542332	+	TSC_hg19_v1_chr13_+_32420857 BC021729	104467	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	289006	+	BC146956 BC146965 NM_001136571	569654	-	NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like	0.999838	CTCF.p2:0:1.000
chr15	65563418	65563524	reg1014138.p2	9.082	+	BC035776 AF035408 AY358904 AK225652 AK225926 AK313352 TSC_hg19_v1_chr15_-_65503811 NM_003613	-59659	-	TSC_hg19_v1_chr15_-_65477676 AL136922 AK308133 AK292316 AK310614	-85785	-	TSC_hg19_v1_chr15_-_65477471 BC130373 BC136487 BC144166 AJ006267 NM_006660	-85970	-	BC006389 NM_017851 TSC_hg19_v1_chr15_-_65579223 AK000516	15689	-	BC042054 TSC_hg19_v1_chr15_-_65670341 BC067107 NM_004884	106880	-	TSC_hg19_v1_chr15_-_65715258 AB529157	151774	-	BC035776|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AF035408|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AY358904|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225652|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225926|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK313352|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##NM_003613|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AL136922|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK308133|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK292316|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK310614|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC130373|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC136487|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC144166|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AJ006267|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##NM_006660|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC006389|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##NM_017851|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##AK000516|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3	0.184463	
chrX	120442526	120442620	reg1011010.p2	9.082	+	TSC_hg19_v1_chrX_+_120181464 BC050732 NM_012084 AK313356	-261133	+	BC029540 NM_001080141 NM_001080146	-322936	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080141 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	-327796	-	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	1875667	+	TSC_hg19_v1_chrX_-_122866885 AK001758	2424310	-	TSC_hg19_v1_chrX_-_122866897 NM_001081550	2424324	-	BC050732|GLUD2|2747|glutamate dehydrogenase 2##NM_012084|GLUD2|2747|glutamate dehydrogenase 2##AK313356|GLUD2|2747|glutamate dehydrogenase 2##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##AK001758|THOC2|57187|THO complex 2##NM_001081550|THOC2|57187|THO complex 2	0.982453	CTCF.p2:-10:0.982
chr15	71104513	71104645	reg1015756.p1	9.081	+	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	-48737	-	BC016881 AL834243 NM_001008224 AK055435	-109952	-	TSC_hg19_v1_chr15_-_70878946 BC040579	-225635	-	CU675231 BC006082 BC009446 BC014018 AL833876 BC039153 TSC_hg19_v1_chr15_-_71146496 AK130092 AF443828 AF443829 AK002058 NM_018357 NM_197958	41889	-	CU693296 DQ890927 DQ894089 EU176528 AL360202 TSC_hg19_v1_chr15_-_71184737 BC027857 BC072414 AK313472 NM_020147	80112	-	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	80396	+	AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC006082|LARP6|55323|La ribonucleoprotein domain family, member 6##BC009446|LARP6|55323|La ribonucleoprotein domain family, member 6##BC014018|LARP6|55323|La ribonucleoprotein domain family, member 6##AL833876|LARP6|55323|La ribonucleoprotein domain family, member 6##BC039153|LARP6|55323|La ribonucleoprotein domain family, member 6##AK130092|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443828|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443829|LARP6|55323|La ribonucleoprotein domain family, member 6##AK002058|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_018357|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_197958|LARP6|55323|La ribonucleoprotein domain family, member 6##DQ890927|THAP10|56906|THAP domain containing 10##DQ894089|THAP10|56906|THAP domain containing 10##EU176528|THAP10|56906|THAP domain containing 10##AL360202|THAP10|56906|THAP domain containing 10##BC027857|THAP10|56906|THAP domain containing 10##BC072414|THAP10|56906|THAP domain containing 10##AK313472|THAP10|56906|THAP domain containing 10##NM_020147|THAP10|56906|THAP domain containing 10##BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49	0.993722	CTCF.p2:3:0.994
chr20	21216413	21216583	reg1003469.p1	9.081	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	-109771	+	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	-109834	+	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	-523270	-	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	67477	+	NM_033176 TSC_hg19_v1_chr20_-_21378181	161616	-	NM_002509	278165	-	BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1##DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2##NM_033176|NKX2-4|644524|NK2 homeobox 4##NM_002509|NKX2-2|4821|NK2 homeobox 2	0.988483	CTCF.p2:-18:0.988
chr2	17900949	17901102	reg1014481.p1	9.081	+	TSC_hg19_v1_chr2_+_17721989 AF039555 U14747 AB001104	-179005	+	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	-179138	+	DQ860102 NM_001099218	-201320	-	TSC_hg19_v1_chr2_-_17935047 BC032675	34003	-	TSC_hg19_v1_chr2_-_17935077 AL832979 AL136544	34041	-	BC039828 TSC_hg19_v1_chr2_-_17935086 NM_001142286 NM_024624	34070	-	AF039555|VSNL1|7447|visinin-like 1##U14747|VSNL1|7447|visinin-like 1##AB001104|VSNL1|7447|visinin-like 1##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##BC032675|SMC6|79677|structural maintenance of chromosomes 6##AL832979|SMC6|79677|structural maintenance of chromosomes 6##AL136544|SMC6|79677|structural maintenance of chromosomes 6##BC039828|SMC6|79677|structural maintenance of chromosomes 6##NM_001142286|SMC6|79677|structural maintenance of chromosomes 6##NM_024624|SMC6|79677|structural maintenance of chromosomes 6	0.077896	
chr10	22710134	22710280	reg1011894.p1	9.079	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-75751	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-100042	+	TSC_hg19_v1_chr10_+_22605316 NM_001204062 NM_012071 BX647275 AF201948 BC022898 AF078848 AK128789 AK313235 AK295109 AY542159	-104882	+	TSC_hg19_v1_chr10_+_22726003 AK295718	15792	+	AK294817 TSC_hg19_v1_chr10_-_23003038	292830	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	293283	-	NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##NM_001204062|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough##NM_012071|COMMD3|23412|COMM domain containing 3##BX647275|COMMD3|23412|COMM domain containing 3##AF201948|COMMD3|23412|COMM domain containing 3##BC022898|COMMD3|23412|COMM domain containing 3##AF078848|COMMD3|23412|COMM domain containing 3##AK128789|COMMD3|23412|COMM domain containing 3##AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough##AY542159|COMMD3|23412|COMM domain containing 3##AK295718|LOC100289455|100289455|uncharacterized LOC100289455##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha	0.999698	CTCF.p2:25:1.000
chr12	49730952	49731052	reg1014410.p1	9.078	+	BC110812 AF466366 NM_001008223	-39	-	NM_001100620 NM_005480 TSC_hg19_v1_chr12_+_49717037 AK315211 AK296811 AK309716 AK310709 AK299302 BC032583 BC018627 BC011597	-13966	+	NM_006262 TSC_hg19_v1_chr12_+_49688929 BC032703 AB528454 CU689492 DQ893358 DQ896677	-42057	+	TSC_hg19_v1_chr12_+_49740718 AK055747	9701	+	BC033236 NM_024902	10038	+	TSC_hg19_v1_chr12_+_49760679 AK095582 NM_023071	29687	+	BC110812|C1QL4|338761|complement component 1, q subcomponent-like 4##AF466366|C1QL4|338761|complement component 1, q subcomponent-like 4##NM_001008223|C1QL4|338761|complement component 1, q subcomponent-like 4##NM_001100620|TROAP|10024|trophinin associated protein (tastin)##NM_005480|TROAP|10024|trophinin associated protein (tastin)##AK315211|TROAP|10024|trophinin associated protein (tastin)##AK296811|TROAP|10024|trophinin associated protein (tastin)##AK309716|TROAP|10024|trophinin associated protein (tastin)##AK310709|TROAP|10024|trophinin associated protein (tastin)##AK299302|TROAP|10024|trophinin associated protein (tastin)##BC032583|TROAP|10024|trophinin associated protein (tastin)##BC018627|TROAP|10024|trophinin associated protein (tastin)##BC011597|TROAP|10024|trophinin associated protein (tastin)##NM_006262|PRPH|5630|peripherin##BC032703|PRPH|5630|peripherin##DQ893358|PRPH|5630|peripherin##DQ896677|PRPH|5630|peripherin##AK055747|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##AK095582|SPATS2|65244|spermatogenesis associated, serine-rich 2##NM_023071|SPATS2|65244|spermatogenesis associated, serine-rich 2	0.443968	CTCF.p2:22:0.444
chr14	61655827	61655967	reg1012365.p1	9.078	+	TSC_hg19_v1_chr14_+_61447962 BX648332 BC110378 BC064429 BX248072 AF070578 AK303839	-207842	+	TSC_hg19_v1_chr14_+_61447932 BC050349	-207961	+	NM_001172702 NM_153811 AF543422 TSC_hg19_v1_chr14_+_61447920	-208020	+	AB464738 TSC_hg19_v1_chr14_-_61747887	91980	-	BC101726 BC113559 TSC_hg19_v1_chr14_-_61747937	92028	-	TSC_hg19_v1_chr14_-_61747957 AK091169 AX746825	92068	-	BX648332|SLC38A6|145389|solute carrier family 38, member 6##BC110378|SLC38A6|145389|solute carrier family 38, member 6##BC064429|SLC38A6|145389|solute carrier family 38, member 6##BX248072|SLC38A6|145389|solute carrier family 38, member 6##AF070578|SLC38A6|145389|solute carrier family 38, member 6##AK303839|SLC38A6|145389|solute carrier family 38, member 6##BC050349|SLC38A6|145389|solute carrier family 38, member 6##NM_001172702|SLC38A6|145389|solute carrier family 38, member 6##NM_153811|SLC38A6|145389|solute carrier family 38, member 6##AF543422|SLC38A6|145389|solute carrier family 38, member 6##BC101726|TMEM30B|161291|transmembrane protein 30B##BC113559|TMEM30B|161291|transmembrane protein 30B##AK091169|TMEM30B|161291|transmembrane protein 30B	0.062712	
chr4	6909634	6909775	reg1015438.p1	9.078	+	TSC_hg19_v1_chr4_+_6784518 AK124715 EF553521	-125176	+	TSC_hg19_v1_chr4_+_6784467 BC150286 D86985	-125230	+	TSC_hg19_v1_chr4_+_6784458 NM_001100590 NM_014743	-125249	+	TSC_hg19_v1_chr4_+_6911192 NM_001113361	1448	+	TSC_hg19_v1_chr4_-_6911379 BC032036	1701	-	TSC_hg19_v1_chr4_+_6911497 NM_020773	1772	+	AK124715|KIAA0232|9778|KIAA0232##EF553521|KIAA0232|9778|KIAA0232##BC150286|KIAA0232|9778|KIAA0232##D86985|KIAA0232|9778|KIAA0232##NM_001100590|KIAA0232|9778|KIAA0232##NM_014743|KIAA0232|9778|KIAA0232##NM_001113361|TBC1D14|57533|TBC1 domain family, member 14##NM_020773|TBC1D14|57533|TBC1 domain family, member 14	0.17823	
chr5	7928015	7928130	reg1013590.p1	9.078	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-58762	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-58813	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-58940	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	1618122	-	BC095521 NM_019599	1702390	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	2321912	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.991574	CTCF.p2:1:0.992
chr1	8786654	8786810	reg1013992.p1	9.077	+	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	-302715	-	NM_001080397	-402343	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-700334	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	90860	-	GU170215 NM_001201483	144902	-	BC001810 TSC_hg19_v1_chr1_-_8938710 AK098420 M14328 BC011130	151975	-	AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##GU170215|ENO1|2023|enolase 1, (alpha)##NM_001201483|ENO1|2023|enolase 1, (alpha)##BC001810|ENO1|2023|enolase 1, (alpha)##AK098420|ENO1|2023|enolase 1, (alpha)##M14328|ENO1|2023|enolase 1, (alpha)##BC011130|ENO1|2023|enolase 1, (alpha)	0.852489	CTCF.p2:30:0.852
chr2	196931638	196931792	reg1016547.p1	9.076	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	-409807	+	BC029413 NM_001127257 CR749813	-410140	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-3872086	-	AB463018 AF327442 AK094515 NM_018897 AB023161	1780	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	104564	-	TSC_hg19_v1_chr2_-_197036310 NM_004226	104603	-	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##NM_004226|STK17B|9262|serine/threonine kinase 17b	0.605575	CTCF.p2:-2:0.606
chr6	159531142	159531249	reg1013998.p2	9.076	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-65094	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-109974	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	-110376	-	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	59235	+	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	583055	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	583167	-	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial	0.0	
chr12	51441666	51441803	reg1010988.p1	9.075	+	BC002592 AJ493662 NM_001174125	-19700	-	TSC_hg19_v1_chr12_-_51420168 AB062284 AB004857 AF064484 AF046997 BC100014 AK128640 AK315987 NM_000617 NM_001174126 NM_001174127 NM_001174128	-21587	-	AK094735 NM_001174129	-21811	-	NM_001243689 NM_015416 AF329277 AK301955 TSC_hg19_v1_chr12_+_51442109 AF195651 AK000639 AK304707 AK315119 AK127540 AK301898 AK225836 BC064943 AK057866 AF315598 AY259835 AY259836 CU687972	377	+	BC017221 TSC_hg19_v1_chr12_-_51477184 AK313080	35452	-	TSC_hg19_v1_chr12_-_51477380 AJ298133 NM_030809	35642	-	BC002592|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AJ493662|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174125|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AB062284|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AB004857|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AF064484|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AF046997|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##BC100014|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AK128640|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AK315987|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_000617|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174126|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174127|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174128|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AK094735|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174129|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001243689|LETMD1|25875|LETM1 domain containing 1##NM_015416|LETMD1|25875|LETM1 domain containing 1##AF329277|LETMD1|25875|LETM1 domain containing 1##AK301955|LETMD1|25875|LETM1 domain containing 1##AF195651|LETMD1|25875|LETM1 domain containing 1##AK000639|LETMD1|25875|LETM1 domain containing 1##AK304707|LETMD1|25875|LETM1 domain containing 1##AK315119|LETMD1|25875|LETM1 domain containing 1##AK127540|LETMD1|25875|LETM1 domain containing 1##AK301898|LETMD1|25875|LETM1 domain containing 1##AK225836|LETMD1|25875|LETM1 domain containing 1##BC064943|LETMD1|25875|LETM1 domain containing 1##AK057866|LETMD1|25875|LETM1 domain containing 1##AF315598|LETMD1|25875|LETM1 domain containing 1##AY259835|LETMD1|25875|LETM1 domain containing 1##AY259836|LETMD1|25875|LETM1 domain containing 1##BC017221|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##AK313080|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	0.5742	CTCF.p2:-45:0.574
chr15	80527294	80527406	reg1013526.p2	9.075	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-81974	+	TSC_hg19_v1_chr15_+_80445268 D28440 NM_000137 AK313951	-82098	+	TSC_hg19_v1_chr15_+_80445130 AK297965	-82218	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	169384	+	AK295763 TSC_hg19_v1_chr15_+_80733623	206255	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	460312	+	M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##D28440|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##NM_000137|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK313951|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK297965|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1	0.0	
chr18	20393730	20393857	reg1014326.p1	9.074	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	-395968	-	X95701 BC027891 NM_005257 TSC_hg19_v1_chr18_+_19749549	-644317	+	AK123079 TSC_hg19_v1_chr18_-_19749029	-644807	-	TSC_hg19_v1_chr18_+_20513319 NM_002894 U72066 AK292481	119555	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	120022	+	EF028204 NM_001100619	321933	+	HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##X95701|GATA6|2627|GATA binding protein 6##BC027891|GATA6|2627|GATA binding protein 6##NM_005257|GATA6|2627|GATA binding protein 6##AK123079|LOC100128893|100128893|uncharacterized LOC100128893##NM_002894|RBBP8|5932|retinoblastoma binding protein 8##U72066|RBBP8|5932|retinoblastoma binding protein 8##AK292481|RBBP8|5932|retinoblastoma binding protein 8##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	0.52895	CTCF.p2:-5:0.529
chr5	102017250	102017358	reg1013493.p1	9.074	+	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	-182671	-	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	-385196	-	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-1778376	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	184226	+	M37721 TSC_hg19_v1_chr5_+_102201730 AK296521 AK290158 S75037 S75038 AB527419 AB095007 BT007419	184502	+	BC151135 BC157835 BC015325 CR627424 AK295796 AK225572 AK000132 NM_017676 TSC_hg19_v1_chr5_-_102455843	438509	-	DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase##M37721|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK296521|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK290158|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75037|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75038|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AB095007|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BT007419|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BC151135|GIN1|54826|gypsy retrotransposon integrase 1##BC157835|GIN1|54826|gypsy retrotransposon integrase 1##BC015325|GIN1|54826|gypsy retrotransposon integrase 1##CR627424|GIN1|54826|gypsy retrotransposon integrase 1##AK295796|GIN1|54826|gypsy retrotransposon integrase 1##AK225572|GIN1|54826|gypsy retrotransposon integrase 1##AK000132|GIN1|54826|gypsy retrotransposon integrase 1##NM_017676|GIN1|54826|gypsy retrotransposon integrase 1	0.964146	CTCF.p2:-17:0.964
chr8	99049450	99049554	reg1012287.p1	9.074	+	TSC_hg19_v1_chr8_+_98881340 NM_002380 NM_030583 BC010444 AY358895 AK075489 AL833931 AL137638	-168173	+	TSC_hg19_v1_chr8_+_98788065 BC031021 AK075326 BC014129 AL136942 AK311377 AX810698 AB528832 AF317417 AM392726 AM393691	-261377	+	AY057051 AY261384 NM_018407 AF527412 TSC_hg19_v1_chr8_+_98787993	-261601	+	AB591031 X79238 BC032700 TSC_hg19_v1_chr8_-_99057620	8106	-	L05095 TSC_hg19_v1_chr8_-_99057755	8251	-	BC095426 TSC_hg19_v1_chr8_-_99057774 AK312102 D28438 AK308890 NM_000989	8294	-	NM_002380|MATN2|4147|matrilin 2##NM_030583|MATN2|4147|matrilin 2##BC010444|MATN2|4147|matrilin 2##AY358895|MATN2|4147|matrilin 2##AK075489|MATN2|4147|matrilin 2##AL833931|MATN2|4147|matrilin 2##AL137638|MATN2|4147|matrilin 2##BC031021|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK075326|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##BC014129|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AL136942|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK311377|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF317417|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AM392726|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AM393691|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AY057051|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AY261384|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##NM_018407|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF527412|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##X79238|RPL30|6156|ribosomal protein L30##BC032700|RPL30|6156|ribosomal protein L30##L05095|RPL30|6156|ribosomal protein L30##BC095426|RPL30|6156|ribosomal protein L30##AK312102|RPL30|6156|ribosomal protein L30##D28438|RPL30|6156|ribosomal protein L30##AK308890|RPL30|6156|ribosomal protein L30##NM_000989|RPL30|6156|ribosomal protein L30	0.212696	CTCF.p2:28:0.213
chr1	3407908	3408017	reg1013334.p1	9.073	+	AK310408 TSC_hg19_v1_chr1_+_3388187 AK296150	-19778	+	TSC_hg19_v1_chr1_+_3371228 NM_014448 AK095984	-36757	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	-422186	+	TSC_hg19_v1_chr1_-_3447976 AB011539	40030	-	AB231860 NM_001409	120096	-	TSC_hg19_v1_chr1_+_3541565 NM_182752 AK096427	133602	+	AK310408|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK296150|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##NM_014448|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK095984|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16##AB011539|MEGF6|1953|multiple EGF-like-domains 6##AB231860|MEGF6|1953|multiple EGF-like-domains 6##NM_001409|MEGF6|1953|multiple EGF-like-domains 6##NM_182752|TPRG1L|127262|tumor protein p63 regulated 1-like##AK096427|TPRG1L|127262|tumor protein p63 regulated 1-like	0.942738	CTCF.p2:0:0.943
chr6	95346935	95347056	reg1014761.p2	9.073	+	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	-1217812	-	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-4050157	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-4050312	-	TSC_hg19_v1_chr6_-_96025325 BC047582	678294	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	678406	+	NM_006581 AK314966 TSC_hg19_v1_chr6_+_96463867 BC001879 BC036101 AB023021	1116872	+	BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha##NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	0.0	
chr9	17531774	17531925	reg1017011.p1	9.073	+	TSC_hg19_v1_chr9_+_17134988 AK303973 AK308837 BX647069 AK098502 NM_001114395 NM_017738	-396832	+	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	-661083	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	-661182	-	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	47247	+	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	942239	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	942334	+	AK303973|CNTLN|54875|centlein, centrosomal protein##AK308837|CNTLN|54875|centlein, centrosomal protein##BX647069|CNTLN|54875|centlein, centrosomal protein##AK098502|CNTLN|54875|centlein, centrosomal protein##NM_001114395|CNTLN|54875|centlein, centrosomal protein##NM_017738|CNTLN|54875|centlein, centrosomal protein##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1	0.975079	CTCF.p2:-3:0.975
chr1	15921729	15921850	reg1014624.p1	9.072	+	DQ893530 DQ896746 TSC_hg19_v1_chr1_-_15911519 AY057097 AK027037 AK130034 AK225366 BC005090 NM_024758	-10249	-	TSC_hg19_v1_chr1_+_15853357 AK091848 AX747219 AB023179 NM_015291 CR749259 CR749567 AL833299 AK292479 BX648982	-68424	+	BC047363 TSC_hg19_v1_chr1_+_15853342	-68464	+	TSC_hg19_v1_chr1_+_15943952 AK293006 NM_032341	22163	+	TSC_hg19_v1_chr1_+_15944018 BC006011	22248	+	TSC_hg19_v1_chr1_+_15944063 CU675225	22322	+	DQ893530|AGMAT|79814|agmatine ureohydrolase (agmatinase)##DQ896746|AGMAT|79814|agmatine ureohydrolase (agmatinase)##AY057097|AGMAT|79814|agmatine ureohydrolase (agmatinase)##AK130034|AGMAT|79814|agmatine ureohydrolase (agmatinase)##AK225366|AGMAT|79814|agmatine ureohydrolase (agmatinase)##BC005090|AGMAT|79814|agmatine ureohydrolase (agmatinase)##NM_024758|AGMAT|79814|agmatine ureohydrolase (agmatinase)##AK091848|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##AB023179|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##NM_015291|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##CR749259|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##CR749567|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##AL833299|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##AK292479|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##BX648982|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##BC047363|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##AK293006|DDI2|84301|DNA-damage inducible 1 homolog 2 (S. cerevisiae)##NM_032341|DDI2|84301|DNA-damage inducible 1 homolog 2 (S. cerevisiae)##BC006011|DDI2|84301|DNA-damage inducible 1 homolog 2 (S. cerevisiae)	0.852282	CTCF.p2:-6:0.852
chr22	20255929	20256017	reg1011876.p1	9.072	+	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	-206	-	NM_001243537	-118543	-	TSC_hg19_v1_chr22_+_20119357 AY894890 BC053544 NM_001185024 NM_013373 AK131238	-136540	+	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	51596	-	NM_001242313	121695	+	BC072398 TSC_hg19_v1_chr22_-_20427830	171857	-	AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##NM_001243537|LOC388849|388849|uncharacterized LOC388849##AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8##BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8##AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_001242313|TMEM191B|728229|transmembrane protein 191B##BC072398|PI4KAP1|728233|phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1	0.532919	CTCF.p2:-2:0.533
chr6	90142692	90142816	reg1012483.p1	9.072	+	TSC_hg19_v1_chr6_-_90121986 NM_021244	-20630	-	TSC_hg19_v1_chr6_-_90121945 AK289799	-20826	-	BC003088 AF272036 AL137502 TSC_hg19_v1_chr6_-_90121800	-21014	-	TSC_hg19_v1_chr6_+_90142897 NM_001242809 NM_001242813 NM_014942 AK307792 BC042173 AB023174	181	+	NM_001242811 AK295731	129323	+	NM_001242814 AK096867	133871	+	NM_021244|RRAGD|58528|Ras-related GTP binding D##AK289799|RRAGD|58528|Ras-related GTP binding D##BC003088|RRAGD|58528|Ras-related GTP binding D##AF272036|RRAGD|58528|Ras-related GTP binding D##AL137502|RRAGD|58528|Ras-related GTP binding D##NM_001242809|ANKRD6|22881|ankyrin repeat domain 6##NM_001242813|ANKRD6|22881|ankyrin repeat domain 6##NM_014942|ANKRD6|22881|ankyrin repeat domain 6##AK307792|ANKRD6|22881|ankyrin repeat domain 6##BC042173|ANKRD6|22881|ankyrin repeat domain 6##AB023174|ANKRD6|22881|ankyrin repeat domain 6##NM_001242811|ANKRD6|22881|ankyrin repeat domain 6##AK295731|ANKRD6|22881|ankyrin repeat domain 6##NM_001242814|ANKRD6|22881|ankyrin repeat domain 6##AK096867|ANKRD6|22881|ankyrin repeat domain 6	0.250541	CTCF.p2:-35:0.212
chr7	22539827	22539960	reg1013840.p1	9.072	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	-46	-	AL833195 NM_012294	-143372	-	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-554411	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	226930	+	TSC_hg19_v1_chr7_+_22767104 X04403	227225	+	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	322550	-	BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	0.998464	CTCF.p2:-11:0.998
chr8	10447873	10447955	reg1000385.p2	9.072	+	BC033497 NM_001197020 NM_198464 AY358867	-64847	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	-494851	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	-536035	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	64726	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	82245	+	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	140070	-	BC033497|PRSS55|203074|protease, serine, 55##NM_001197020|PRSS55|203074|protease, serine, 55##NM_198464|PRSS55|203074|protease, serine, 55##AY358867|PRSS55|203074|protease, serine, 55##AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7	1.010607	
chr9	109739170	109739311	reg1016063.p1	9.072	+	TSC_hg19_v1_chr9_+_109686439 CR749850	-52771	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	-113876	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-1282322	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	306292	+	TSC_hg19_v1_chr9_+_110045559 AK125226 AK223479	306317	+	TSC_hg19_v1_chr9_+_110045567 D21090	306362	+	CR749850|ZNF462|58499|zinc finger protein 462##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK125226|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK223479|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##D21090|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.080425	
chr16	85309345	85309457	reg1014591.p1	9.071	+	BC093665 BC111944 AK126284 NM_198491	-163347	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-248031	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-264272	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	335620	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	337552	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	413141	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.99693	CTCF.p2:0:0.997
chr17	45879904	45879999	reg1013121.p2	9.071	+	AF093098 NM_013351 AK223634 BC039739 AF241243 AB590854 TSC_hg19_v1_chr17_+_45810959	-69167	+	TSC_hg19_v1_chr17_+_45773425 AB383985	-106502	+	TSC_hg19_v1_chr17_+_45773067 BC111418	-106912	+	BC065482 TSC_hg19_v1_chr17_-_45899130	19173	-	TSC_hg19_v1_chr17_-_45899154 AF323729 AK000267 BC028010 NM_145798 AK289523 AF392446	19234	-	CU677497 CU690922 DQ891139 DQ894318 BC015904 TSC_hg19_v1_chr17_-_45908897 BC039852 AK293624 BC052601 NM_145255 NM_148887	28942	-	AF093098|TBX21|30009|T-box 21##NM_013351|TBX21|30009|T-box 21##AK223634|TBX21|30009|T-box 21##BC039739|TBX21|30009|T-box 21##AF241243|TBX21|30009|T-box 21##BC111418|TBKBP1|9755|TBK1 binding protein 1##BC065482|OSBPL7|114881|oxysterol binding protein-like 7##AF323729|OSBPL7|114881|oxysterol binding protein-like 7##BC028010|OSBPL7|114881|oxysterol binding protein-like 7##NM_145798|OSBPL7|114881|oxysterol binding protein-like 7##AK289523|OSBPL7|114881|oxysterol binding protein-like 7##AF392446|OSBPL7|114881|oxysterol binding protein-like 7##DQ891139|MRPL10|124995|mitochondrial ribosomal protein L10##DQ894318|MRPL10|124995|mitochondrial ribosomal protein L10##BC015904|MRPL10|124995|mitochondrial ribosomal protein L10##BC039852|MRPL10|124995|mitochondrial ribosomal protein L10##AK293624|MRPL10|124995|mitochondrial ribosomal protein L10##BC052601|MRPL10|124995|mitochondrial ribosomal protein L10##NM_145255|MRPL10|124995|mitochondrial ribosomal protein L10##NM_148887|MRPL10|124995|mitochondrial ribosomal protein L10	0.951403	CTCF.p2:-2:0.951
chr2	127002659	127002773	reg1013512.p1	9.071	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2219852	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-4489479	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-4508251	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	410991	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	411076	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	862025	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.229628	
chr2	21341305	21341420	reg1015142.p1	9.071	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-74433	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-74463	-	TSC_hg19_v1_chr2_-_21266818 AB587530 HM487065 M14081 M14162 BC051278	-74541	-	NM_052920	2266935	+	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	2808584	-	TSC_hg19_v1_chr2_+_24150144 BC037901	2808795	+	AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##HM487065|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14081|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14162|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC051278|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A	0.892647	CTCF.p2:9:0.893
chr2	86595520	86595682	reg1013446.p1	9.071	+	AK297287 NM_001164730	-30396	-	AY562239 CR457301 CU687956 AK297201 TSC_hg19_v1_chr2_-_86564750 BC064846 AK294300 AK297359 AK297373 AK299334 AK023172 NM_001164731 NM_001164732 NM_022912	-30868	-	NM_016622 NM_145644 TSC_hg19_v1_chr2_+_86426604 BC020651 AK074352 AK314555 AK314577 AF208849 AL832982 CU676602	-169017	+	NM_018433	72669	+	TSC_hg19_v1_chr2_+_86668482 BX647752 BX640698	72854	+	TSC_hg19_v1_chr2_+_86668501 BC038297 BX647271 BX649109 CR749581 AB018285 BX648841 NM_001146688	72934	+	AK297287|REEP1|65055|receptor accessory protein 1##NM_001164730|REEP1|65055|receptor accessory protein 1##AY562239|REEP1|65055|receptor accessory protein 1##CR457301|REEP1|65055|receptor accessory protein 1##AK297201|REEP1|65055|receptor accessory protein 1##BC064846|REEP1|65055|receptor accessory protein 1##AK294300|REEP1|65055|receptor accessory protein 1##AK297359|REEP1|65055|receptor accessory protein 1##AK297373|REEP1|65055|receptor accessory protein 1##AK299334|REEP1|65055|receptor accessory protein 1##AK023172|REEP1|65055|receptor accessory protein 1##NM_001164731|REEP1|65055|receptor accessory protein 1##NM_001164732|REEP1|65055|receptor accessory protein 1##NM_022912|REEP1|65055|receptor accessory protein 1##NM_016622|MRPL35|51318|mitochondrial ribosomal protein L35##NM_145644|MRPL35|51318|mitochondrial ribosomal protein L35##BC020651|MRPL35|51318|mitochondrial ribosomal protein L35##AK074352|MRPL35|51318|mitochondrial ribosomal protein L35##AK314555|MRPL35|51318|mitochondrial ribosomal protein L35##AK314577|MRPL35|51318|mitochondrial ribosomal protein L35##AF208849|MRPL35|51318|mitochondrial ribosomal protein L35##AL832982|MRPL35|51318|mitochondrial ribosomal protein L35##NM_018433|KDM3A|55818|lysine (K)-specific demethylase 3A##BX647752|KDM3A|55818|lysine (K)-specific demethylase 3A##BX640698|KDM3A|55818|lysine (K)-specific demethylase 3A##BC038297|KDM3A|55818|lysine (K)-specific demethylase 3A##BX647271|KDM3A|55818|lysine (K)-specific demethylase 3A##BX649109|KDM3A|55818|lysine (K)-specific demethylase 3A##CR749581|KDM3A|55818|lysine (K)-specific demethylase 3A##AB018285|KDM3A|55818|lysine (K)-specific demethylase 3A##BX648841|KDM3A|55818|lysine (K)-specific demethylase 3A##NM_001146688|KDM3A|55818|lysine (K)-specific demethylase 3A	0.218237	CTCF.p2:-5:0.218
chr8	52763180	52763319	reg1016543.p1	9.071	+	EU170240 AY877349 NM_144651	-41296	-	AJ003030 NM_018967	-1938653	+	NM_001007176 BC017981 AJ276240	-2778340	+	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	48353	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	48478	-	AK299452 TSC_hg19_v1_chr8_+_52812239	48974	+	EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.386272	CTCF.p2:2:0.386
chr1	34479708	34479840	reg1013935.p2	9.070	+	AK097707 NM_145205	-153699	+	NM_145238 AK131405 TSC_hg19_v1_chr1_+_33938251 AK290195 BC008827 BC011404	-541523	+	TSC_hg19_v1_chr1_-_33896604 AJ242730	-583166	-	TSC_hg19_v1_chr1_-_34630856 AB212622	151091	-	AY210418 NM_052896	151668	-	AK123355 NM_032884 BC007637	152825	+	AK097707|HMGB4|127540|high mobility group box 4##NM_145205|HMGB4|127540|high mobility group box 4##NM_145238|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK131405|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK290195|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC008827|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC011404|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AJ242730|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AB212622|CSMD2|114784|CUB and Sushi multiple domains 2##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2##AK123355|C1orf94|84970|chromosome 1 open reading frame 94##NM_032884|C1orf94|84970|chromosome 1 open reading frame 94##BC007637|C1orf94|84970|chromosome 1 open reading frame 94	0.0	
chr16	90268307	90268412	reg1013980.p1	9.069	+	TSC_hg19_v1_chr16_+_90168671 AK092558 AX747598	-99683	+	AM690992 AM690991 AM690993 NM_001098173	-126025	-	AB527979 BC107033 AF274347 AF274348 NM_052996	-139698	-	None	None	None	None	None	None	None	None	None	AK092558|FAM157C|100132055|family with sequence similarity 157, member C##AM690992|PRDM7|11105|PR domain containing 7##AM690991|PRDM7|11105|PR domain containing 7##AM690993|PRDM7|11105|PR domain containing 7##NM_001098173|PRDM7|11105|PR domain containing 7##BC107033|PRDM7|11105|PR domain containing 7##AF274347|PRDM7|11105|PR domain containing 7##AF274348|PRDM7|11105|PR domain containing 7##NM_052996|PRDM7|11105|PR domain containing 7	0.973166	CTCF.p2:-7:0.973
chr3	183735268	183735410	reg1014518.p1	9.069	+	TSC_hg19_v1_chr3_-_183602690 NM_001037639 NM_018622	-132631	-	TSC_hg19_v1_chr3_-_183602669 BC003653	-132661	-	TSC_hg19_v1_chr3_-_183602663 AK024765	-132677	-	TSC_hg19_v1_chr3_-_183735673 BC142670 BC142719 U83661 AF104942 AY754874 AY754875 AY754876 AB209454 BC051358 NM_001023587 NM_005688	352	-	AY159812 NM_182537	13992	+	NM_001145143	14190	+	NM_001037639|PARL|55486|presenilin associated, rhomboid-like##NM_018622|PARL|55486|presenilin associated, rhomboid-like##BC003653|PARL|55486|presenilin associated, rhomboid-like##AK024765|PARL|55486|presenilin associated, rhomboid-like##BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY159812|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D##NM_182537|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D##NM_001145143|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D	0.998586	CTCF.p2:-5:0.999
chr4	84565968	84566099	reg1015352.p1	9.069	+	TSC_hg19_v1_chr4_+_84457420 DQ345298 BC090956 AY358100 NM_032717 DQ324782	-108452	+	TSC_hg19_v1_chr4_+_84457260 AK055749 AK223543	-108761	+	BC016905 TSC_hg19_v1_chr4_-_84406254 EF531340 BC039573 AY358576 AK022704 AK023676 NM_139076	-159759	-	NM_006168	853353	-	NM_001263 U65887	938060	+	NM_014991	1321510	-	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK055749|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK223543|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC016905|FAM175A|84142|family with sequence similarity 175, member A##EF531340|FAM175A|84142|family with sequence similarity 175, member A##BC039573|FAM175A|84142|family with sequence similarity 175, member A##AY358576|FAM175A|84142|family with sequence similarity 175, member A##AK022704|FAM175A|84142|family with sequence similarity 175, member A##AK023676|FAM175A|84142|family with sequence similarity 175, member A##NM_139076|FAM175A|84142|family with sequence similarity 175, member A##NM_006168|NKX6-1|4825|NK6 homeobox 1##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3	0.995407	CTCF.p2:-8:0.995
chr8	50143037	50143185	reg1016274.p1	9.069	+	NM_001007176 BC017981 AJ276240	-158202	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-309201	-	AK021829 BC025676 BC029586 AK316037 AK299659 AK307101 NM_001142857 NM_024593	-495318	-	AJ003030 NM_018967	681485	+	EU170240 AY877349 NM_144651	2578842	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	2668491	-	NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##AK021829|EFCAB1|79645|EF-hand calcium binding domain 1##BC025676|EFCAB1|79645|EF-hand calcium binding domain 1##BC029586|EFCAB1|79645|EF-hand calcium binding domain 1##AK316037|EFCAB1|79645|EF-hand calcium binding domain 1##AK299659|EFCAB1|79645|EF-hand calcium binding domain 1##AK307101|EFCAB1|79645|EF-hand calcium binding domain 1##NM_001142857|EFCAB1|79645|EF-hand calcium binding domain 1##NM_024593|EFCAB1|79645|EF-hand calcium binding domain 1##AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.0	
chr2	60809055	60809179	reg1012761.p1	9.067	+	AF080216 TSC_hg19_v1_chr2_-_60780784	-28339	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	-28595	-	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2340635	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	174367	+	TSC_hg19_v1_chr2_+_61108702 AK303926	299588	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	299620	+	AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)	0.018884	
chrX	56805694	56805826	reg1013440.p4	9.067	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-50069	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-215709	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-546850	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	216211	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	342168	-	BC071694 NM_019003	358297	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.488383	CTCF.p2:-24:0.447
chr2	96055039	96055156	reg1014158.p1	9.066	+	DQ148486 NM_001034914	-42330	+	TSC_hg19_v1_chr2_+_95963054 NM_013434 AB209076 AJ131730 AK095539 AK315437 BC012850 AF120102 AB528387 AF199599 AF367022 BT020075 CU680412 DQ148485 DQ892078 DQ895271 DQ895316	-91991	+	BC113877 BC114525 AK091175 AX746828 TSC_hg19_v1_chr2_+_95940239 AK290366 AK313267 AY358377 BC025736	-114863	+	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	13382	+	NM_001164464	95381	-	BC015353 NM_138800	202668	+	DQ148486|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_001034914|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_013434|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AJ131730|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK095539|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK315437|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC012850|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF120102|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF199599|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF367022|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BT020075|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ148485|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ892078|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895271|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895316|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC113877|PROM2|150696|prominin 2##BC114525|PROM2|150696|prominin 2##AK091175|PROM2|150696|prominin 2##AK290366|PROM2|150696|prominin 2##AK313267|PROM2|150696|prominin 2##AY358377|PROM2|150696|prominin 2##BC025736|PROM2|150696|prominin 2##AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_001164464|TRIM43B|653192|tripartite motif containing 43B##BC015353|TRIM43|129868|tripartite motif containing 43##NM_138800|TRIM43|129868|tripartite motif containing 43	0.85023	CTCF.p2:-5:0.850
chr6	35172955	35173063	reg1012888.p2	9.066	+	AK057234 AK316403 AF536532 BC040003 BC033729 BC090050 AK301778 AK302022 TSC_hg19_v1_chr6_-_35109091 AK098590 AK301975 AK302456 AK302375 AK315078 BC048418 AF536533 NM_001093728 NM_018679	-63915	-	TSC_hg19_v1_chr6_+_34857037 BC022396 NM_015245 D86982 BC031934 BC086310 AK298987 BC132832 BC144341 AB385297	-315909	+	AF118094 AB464280 BT019404 BT019405 CR542068 DQ893239 DQ896569 TSC_hg19_v1_chr6_-_34855820 AK313475 BC021972 D63705 AK302226 NM_005643 X83928	-317304	-	TSC_hg19_v1_chr6_+_35181732 BC052263 AK291218	8859	+	TSC_hg19_v1_chr6_+_35182182 AF452494 NM_152753 EU832354 EU832439 AY639608	9179	+	CR936607 TSC_hg19_v1_chr6_+_35200693	27651	+	AK057234|TCP11|6954|t-complex 11 homolog (mouse)##AK316403|TCP11|6954|t-complex 11 homolog (mouse)##AF536532|TCP11|6954|t-complex 11 homolog (mouse)##BC040003|TCP11|6954|t-complex 11 homolog (mouse)##BC033729|TCP11|6954|t-complex 11 homolog (mouse)##BC090050|TCP11|6954|t-complex 11 homolog (mouse)##AK301778|TCP11|6954|t-complex 11 homolog (mouse)##AK302022|TCP11|6954|t-complex 11 homolog (mouse)##AK098590|TCP11|6954|t-complex 11 homolog (mouse)##AK301975|TCP11|6954|t-complex 11 homolog (mouse)##AK302456|TCP11|6954|t-complex 11 homolog (mouse)##AK302375|TCP11|6954|t-complex 11 homolog (mouse)##AK315078|TCP11|6954|t-complex 11 homolog (mouse)##BC048418|TCP11|6954|t-complex 11 homolog (mouse)##AF536533|TCP11|6954|t-complex 11 homolog (mouse)##NM_001093728|TCP11|6954|t-complex 11 homolog (mouse)##NM_018679|TCP11|6954|t-complex 11 homolog (mouse)##BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##AF118094|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BT019404|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BT019405|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##CR542068|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##DQ893239|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##DQ896569|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##AK313475|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BC021972|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##D63705|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##AK302226|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##NM_005643|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##X83928|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BC052263|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AK291218|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AF452494|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##NM_152753|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##EU832354|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##EU832439|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AY639608|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##CR936607|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3	0.926822	CTCF.p2:14:0.927
chr11	115783462	115783642	reg1013437.p2	9.065	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-408372	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-694904	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1234304	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	860146	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	875163	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	875186	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.069975	
chr11	17782062	17782176	reg1013111.p1	9.065	+	NM_001112741 NM_004976 AB529092	-24600	+	NM_002478 AK314968 TSC_hg19_v1_chr11_+_17741117 BC000353 X56677 BC064493 AB463907 BT007157	-40900	+	CU677569 TSC_hg19_v1_chr11_-_17565964 AK290788 AK300936 AB018687 BC016057 AF039699 AF039700 AK225614 NM_005709 NM_153676	-216202	-	TSC_hg19_v1_chr11_-_18034463 AK294022	252331	-	TSC_hg19_v1_chr11_-_18034595 AJ243950 AJ243951 BC000707 NM_012139	252444	-	BC065375 AK292286 TSC_hg19_v1_chr11_-_18034745	252597	-	NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_002478|MYOD1|4654|myogenic differentiation 1##AK314968|MYOD1|4654|myogenic differentiation 1##X56677|MYOD1|4654|myogenic differentiation 1##BC064493|MYOD1|4654|myogenic differentiation 1##BT007157|MYOD1|4654|myogenic differentiation 1##AK290788|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK300936|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AB018687|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##BC016057|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039699|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039700|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK225614|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_005709|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_153676|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK294022|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243950|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243951|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC000707|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##NM_012139|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC065375|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AK292286|SERGEF|26297|secretion regulating guanine nucleotide exchange factor	0.949318	CTCF.p2:-14:0.939
chr6	58287698	58287871	reg1014869.p2	9.065	+	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	-105	-	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	-1105369	+	TSC_hg19_v1_chr6_-_57087081 AF161486 BC015021 NM_016277 CR749371 AK311123	-1200713	-	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	4708217	-	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	5742080	-	TSC_hg19_v1_chr6_+_64231650 CR749458	5943871	+	BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AF161486|RAB23|51715|RAB23, member RAS oncogene family##BC015021|RAB23|51715|RAB23, member RAS oncogene family##NM_016277|RAB23|51715|RAB23, member RAS oncogene family##CR749371|RAB23|51715|RAB23, member RAS oncogene family##AK311123|RAB23|51715|RAB23, member RAS oncogene family##AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	0.988401	CTCF.p2:15:0.988
chr12	121087117	121087240	reg1013878.p1	9.064	+	BC030201 NM_001033677	-8757	+	AK223206 TSC_hg19_v1_chr12_-_121019185 AK303144 AF070660 AF117232 AJ306296 BC012505 NM_015918 NM_198202	-67990	-	AK094011 AK097807 TSC_hg19_v1_chr12_+_120972158 AK126274 AK301608 AB027196 BC016622 BC031596 BC101709 BC101715 BC143493 BT006974 CU677651 D87451 DQ890634 DQ893805	-114678	+	AF169148 AF169149 NM_004276 NM_031205	1192	+	TSC_hg19_v1_chr12_+_121124951 NM_014730	37760	+	TSC_hg19_v1_chr12_+_121124973 D63486 BC016297 BC000371	37861	+	BC030201|CABP1|9478|calcium binding protein 1##NM_001033677|CABP1|9478|calcium binding protein 1##AK223206|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK303144|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF070660|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF117232|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AJ306296|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##BC012505|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015918|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_198202|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK094011|RNF10|9921|ring finger protein 10##AK097807|RNF10|9921|ring finger protein 10##AK126274|RNF10|9921|ring finger protein 10##AK301608|RNF10|9921|ring finger protein 10##AB027196|RNF10|9921|ring finger protein 10##BC016622|RNF10|9921|ring finger protein 10##BC031596|RNF10|9921|ring finger protein 10##BC101709|RNF10|9921|ring finger protein 10##BC101715|RNF10|9921|ring finger protein 10##BC143493|RNF10|9921|ring finger protein 10##BT006974|RNF10|9921|ring finger protein 10##D87451|RNF10|9921|ring finger protein 10##DQ890634|RNF10|9921|ring finger protein 10##DQ893805|RNF10|9921|ring finger protein 10##AF169148|CABP1|9478|calcium binding protein 1##AF169149|CABP1|9478|calcium binding protein 1##NM_004276|CABP1|9478|calcium binding protein 1##NM_031205|CABP1|9478|calcium binding protein 1##NM_014730|MLEC|9761|malectin##D63486|MLEC|9761|malectin##BC016297|MLEC|9761|malectin##BC000371|MLEC|9761|malectin	0.999796	CTCF.p2:0:1.000
chr18	8654639	8654763	reg1013161.p1	9.064	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	-44955	+	TSC_hg19_v1_chr18_+_8609434 BC071600 BC098407 BC050338 NM_001025300	-45265	+	TSC_hg19_v1_chr18_+_7946885 AK294492	-707795	+	AK131528 NM_015210	62667	+	AB384528 TSC_hg19_v1_chr18_+_8718600	63823	+	TSC_hg19_v1_chr18_+_9102620 NM_021074	447921	+	BC071600|RAB12|201475|RAB12, member RAS oncogene family##BC098407|RAB12|201475|RAB12, member RAS oncogene family##BC050338|RAB12|201475|RAB12, member RAS oncogene family##NM_001025300|RAB12|201475|RAB12, member RAS oncogene family##AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165##NM_021074|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa	0.610645	CTCF.p2:-8:0.611
chr3	142305789	142305933	reg1015485.p1	9.064	+	U49844 TSC_hg19_v1_chr3_-_142297678 NM_001184	-8196	-	TSC_hg19_v1_chr3_-_142297595 U76308 Y09077 AK307402	-8262	-	TSC_hg19_v1_chr3_-_142166862 AK096177	-138959	-	TSC_hg19_v1_chr3_+_142315259 NM_001145319 AK290316	9398	+	NM_002670 L20826	36443	+	BC031083 NM_001172312	69877	+	U49844|ATR|545|ataxia telangiectasia and Rad3 related##NM_001184|ATR|545|ataxia telangiectasia and Rad3 related##U76308|ATR|545|ataxia telangiectasia and Rad3 related##Y09077|ATR|545|ataxia telangiectasia and Rad3 related##AK307402|ATR|545|ataxia telangiectasia and Rad3 related##AK096177|XRN1|54464|5'-3' exoribonuclease 1##NM_001145319|PLS1|5357|plastin 1##AK290316|PLS1|5357|plastin 1##NM_002670|PLS1|5357|plastin 1##L20826|PLS1|5357|plastin 1##BC031083|PLS1|5357|plastin 1##NM_001172312|PLS1|5357|plastin 1	0.999272	CTCF.p2:-17:0.999
chr4	56733278	56733385	reg1013602.p1	9.064	+	TSC_hg19_v1_chr4_+_56719840 BC094751 NM_001024924 NM_018261 NM_178237 AK001755 AK027413	-13466	+	DQ891295 DQ894479 BC012908 NM_006681 X76029 TSC_hg19_v1_chr4_-_56502465	-230919	-	BC034431 NM_152401	-274953	-	AK023683 NM_025009 TSC_hg19_v1_chr4_+_56815093 BC136535 BC136536	81760	+	AK126014 NM_020722	303029	+	AF516672 AY422212 BC142709 TSC_hg19_v1_chr4_-_57253644 AF161436 AK303733 BC141824 AK294332 AY314787 BC015096 NM_181806 AK316296 AK304309 BX648853	520296	-	BC094751|EXOC1|55763|exocyst complex component 1##NM_001024924|EXOC1|55763|exocyst complex component 1##NM_018261|EXOC1|55763|exocyst complex component 1##NM_178237|EXOC1|55763|exocyst complex component 1##AK001755|EXOC1|55763|exocyst complex component 1##AK027413|EXOC1|55763|exocyst complex component 1##DQ891295|NMU|10874|neuromedin U##DQ894479|NMU|10874|neuromedin U##BC012908|NMU|10874|neuromedin U##NM_006681|NMU|10874|neuromedin U##X76029|NMU|10874|neuromedin U##BC034431|PDCL2|132954|phosducin-like 2##NM_152401|PDCL2|132954|phosducin-like 2##AK023683|CEP135|9662|centrosomal protein 135kDa##NM_025009|CEP135|9662|centrosomal protein 135kDa##BC136535|CEP135|9662|centrosomal protein 135kDa##BC136536|CEP135|9662|centrosomal protein 135kDa##AK126014|KIAA1211|57482|KIAA1211##NM_020722|KIAA1211|57482|KIAA1211##AF516672|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AY422212|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC142709|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AF161436|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK303733|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC141824|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK294332|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AY314787|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC015096|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##NM_181806|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK316296|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK304309|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BX648853|AASDH|132949|aminoadipate-semialdehyde dehydrogenase	0.998289	CTCF.p2:2:0.998
chr16	1913782	1913895	reg1012505.p1	9.063	+	TSC_hg19_v1_chr16_+_1877223 BC063017 AL136720 NM_001018104 NM_001142398 NM_031208 AK094199 AB528126 AM392782 CR533499 CU687630	-36591	+	BC002627 AY576804 NM_001040427 NM_005326	-36671	-	TSC_hg19_v1_chr16_-_1876812 AK308825 BC000840 AK299173 AK298174 AK299993	-37010	-	TSC_hg19_v1_chr16_-_1922086 NM_152764	8252	-	TSC_hg19_v1_chr16_-_1922166 NM_001163560	8331	-	NM_001009606	54392	-	BC063017|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##AL136720|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##NM_001018104|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##NM_001142398|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##NM_031208|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##AK094199|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##AM392782|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##CR533499|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##BC002627|HAGH|3029|hydroxyacylglutathione hydrolase##AY576804|HAGH|3029|hydroxyacylglutathione hydrolase##NM_001040427|HAGH|3029|hydroxyacylglutathione hydrolase##NM_005326|HAGH|3029|hydroxyacylglutathione hydrolase##AK308825|HAGH|3029|hydroxyacylglutathione hydrolase##BC000840|HAGH|3029|hydroxyacylglutathione hydrolase##AK299173|HAGH|3029|hydroxyacylglutathione hydrolase##AK298174|HAGH|3029|hydroxyacylglutathione hydrolase##AK299993|HAGH|3029|hydroxyacylglutathione hydrolase##NM_152764|C16orf73|254528|chromosome 16 open reading frame 73##NM_001163560|C16orf73|254528|chromosome 16 open reading frame 73##NM_001009606|HS3ST6|64711|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	0.973583	CTCF.p2:-29:0.974
chr19	246899	247030	reg1002231.p1	9.063	+	AY972818 AY972819 BC136848 BC136867 BC136907 BC136908 NM_001005240	-136313	+	TSC_hg19_v1_chr19_-_70955 AK308635	-176005	-	None	None	None	NM_177543	44204	-	BT007021 CU678210 AF035959 AF047760 AF056083 BC002806 TSC_hg19_v1_chr19_-_291402 NM_003712 NM_177526	44420	-	TSC_hg19_v1_chr19_-_344795 BC028203 NM_017550	97823	-	AY972818|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AY972819|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136848|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136867|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136907|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136908|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##NM_001005240|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AK308635|WASH5P|375690|WAS protein family homolog 5 pseudogene##NM_177543|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BT007021|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF035959|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF047760|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF056083|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BC002806|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_003712|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_177526|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BC028203|MIER2|54531|mesoderm induction early response 1, family member 2##NM_017550|MIER2|54531|mesoderm induction early response 1, family member 2	2.052408	CTCF.p2:3:0.972	CTCF.p2:-54:0.999
chr21	34733236	34733381	reg1005850.p1	9.063	+	AK222770 AK222812 AK312631 TSC_hg19_v1_chr21_+_34697277 BC021825 J03171 BC002590 AB528746 CU692410 DQ891323 DQ894507	-35990	+	TSC_hg19_v1_chr21_+_34697236 NM_000629	-36090	+	TSC_hg19_v1_chr21_+_34638753 AK299961 AB590138 DQ892552 DQ895763 BT009777	-94554	+	TSC_hg19_v1_chr21_+_34775192 NM_005534 U05875	41888	+	TSC_hg19_v1_chr21_+_34775735 BC003624 U05877	42424	+	AK314005 TSC_hg19_v1_chr21_+_34775746 AK292246	42440	+	AK222770|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK222812|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK312631|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC021825|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##J03171|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC002590|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ891323|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ894507|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##NM_000629|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK299961|IL10RB|3588|interleukin 10 receptor, beta##DQ892552|IL10RB|3588|interleukin 10 receptor, beta##DQ895763|IL10RB|3588|interleukin 10 receptor, beta##BT009777|IL10RB|3588|interleukin 10 receptor, beta##NM_005534|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05875|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##BC003624|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05877|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK314005|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK292246|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)	0.941012	CTCF.p2:-10:0.941
chr7	111392395	111392498	reg1012653.p2	9.063	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	-189962	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-661323	+	NM_001024607	-2867810	-	TSC_hg19_v1_chr7_-_111428948 AK294820	36565	-	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	453819	-	TSC_hg19_v1_chr7_-_111846458 AK095906 AK309605 NM_014705	454016	-	AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AK294820|DOCK4|9732|dedicator of cytokinesis 4##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4##AK095906|DOCK4|9732|dedicator of cytokinesis 4##AK309605|DOCK4|9732|dedicator of cytokinesis 4##NM_014705|DOCK4|9732|dedicator of cytokinesis 4	0.907808	CTCF.p2:-10:0.908
chr10	115145016	115145133	reg1014915.p1	9.062	+	TSC_hg19_v1_chr10_+_114710785 FJ010164 FJ010165 FJ010173	-434241	+	TSC_hg19_v1_chr10_+_114710005 AK225809 NM_001146274 NM_001146283 NM_001146284 NM_001146285 NM_001146286 NM_001198525 NM_001198526 NM_001198527 NM_001198528 NM_001198529 NM_001198530 NM_001198531 NM_030756 FJ010174 Y11306 AK315243 FJ010168 FJ010169 FJ010172 FJ010166 FJ010167 FJ010170 BC032656 FJ010171 AK299295 AB440195 AB451266 CR536574 HM352838 HM352839 HM352840 HM352841 HM352842 HM352843 HM352844 HM352845 HM352846 HM352847 HM352848 HM352849 HM352850 HM352851 BX648364	-434772	+	TSC_hg19_v1_chr10_-_114207307 AK308026	-937769	-	AK303948 NM_001177660	165515	+	NM_004132 D49742 S83182 BC031412 AK290832 AK303761 AK303759 AB590433 CU689160 DQ890820 DQ893975	167754	+	AM392642 AM393530 BC126407 BC143751 AL831980 AL832025 AL832330 BX640682 AY177620 AY177621 BX641052 BC005933 BC017866 BC058825 BC070130 AK056969 AY081943 NM_006175 NM_198060	278648	-	FJ010164|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010165|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010173|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK308026|ZDHHC6|64429|zinc finger, DHHC-type containing 6##AK303948|HABP2|3026|hyaluronan binding protein 2##NM_001177660|HABP2|3026|hyaluronan binding protein 2##NM_004132|HABP2|3026|hyaluronan binding protein 2##D49742|HABP2|3026|hyaluronan binding protein 2##S83182|HABP2|3026|hyaluronan binding protein 2##BC031412|HABP2|3026|hyaluronan binding protein 2##AK290832|HABP2|3026|hyaluronan binding protein 2##AK303761|HABP2|3026|hyaluronan binding protein 2##AK303759|HABP2|3026|hyaluronan binding protein 2##DQ890820|HABP2|3026|hyaluronan binding protein 2##DQ893975|HABP2|3026|hyaluronan binding protein 2##AM392642|NRAP|4892|nebulin-related anchoring protein##AM393530|NRAP|4892|nebulin-related anchoring protein##BC126407|NRAP|4892|nebulin-related anchoring protein##BC143751|NRAP|4892|nebulin-related anchoring protein##AL831980|NRAP|4892|nebulin-related anchoring protein##AL832025|NRAP|4892|nebulin-related anchoring protein##AL832330|NRAP|4892|nebulin-related anchoring protein##BX640682|NRAP|4892|nebulin-related anchoring protein##AY177620|NRAP|4892|nebulin-related anchoring protein##AY177621|NRAP|4892|nebulin-related anchoring protein##BX641052|NRAP|4892|nebulin-related anchoring protein##BC005933|NRAP|4892|nebulin-related anchoring protein##BC017866|NRAP|4892|nebulin-related anchoring protein##BC058825|NRAP|4892|nebulin-related anchoring protein##BC070130|NRAP|4892|nebulin-related anchoring protein##AK056969|NRAP|4892|nebulin-related anchoring protein##AY081943|NRAP|4892|nebulin-related anchoring protein##NM_006175|NRAP|4892|nebulin-related anchoring protein##NM_198060|NRAP|4892|nebulin-related anchoring protein	0.986432	CTCF.p2:22:0.986
chr4	139104118	139104250	reg1016598.p1	9.062	+	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-650542	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-650592	-	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-3981266	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	59180	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	832809	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	901219	-	AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.912407	CTCF.p2:0:0.912
chr9	93852065	93852190	reg1017234.p1	9.061	+	NM_001174167 X73568	-262394	+	TSC_hg19_v1_chr9_+_93564206 NM_001174168 BC011399	-287912	+	TSC_hg19_v1_chr9_+_93564100 AK290927	-288012	+	TSC_hg19_v1_chr9_-_94124185 AB528075 AM393420 CU676666 DQ892036 DQ895227 X79888 AK302453	272043	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	272072	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	333917	-	NM_001174167|SYK|6850|spleen tyrosine kinase##X73568|SYK|6850|spleen tyrosine kinase##NM_001174168|SYK|6850|spleen tyrosine kinase##BC011399|SYK|6850|spleen tyrosine kinase##AK290927|SYK|6850|spleen tyrosine kinase##AM393420|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ892036|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ895227|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##X79888|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK302453|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated	0.049077	
chr11	3830463	3830590	reg1014146.p2	9.060	+	NM_014489 AF159615	-752	+	AL096753 NM_001145438 TSC_hg19_v1_chr11_+_3819145 AK307359 AK308525 AK292181 BC009930 AK301991	-11441	+	TSC_hg19_v1_chr11_-_3819023 NM_005387 NM_016320 NM_139131 NM_139132	-11525	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	31629	-	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	31673	-	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	46403	+	NM_014489|PGAP2|27315|post-GPI attachment to proteins 2##AF159615|PGAP2|27315|post-GPI attachment to proteins 2##AL096753|PGAP2|27315|post-GPI attachment to proteins 2##NM_001145438|PGAP2|27315|post-GPI attachment to proteins 2##AK307359|PGAP2|27315|post-GPI attachment to proteins 2##AK292181|PGAP2|27315|post-GPI attachment to proteins 2##BC009930|PGAP2|27315|post-GPI attachment to proteins 2##AK301991|PGAP2|27315|post-GPI attachment to proteins 2##NM_005387|NUP98|4928|nucleoporin 98kDa##NM_016320|NUP98|4928|nucleoporin 98kDa##NM_139131|NUP98|4928|nucleoporin 98kDa##NM_139132|NUP98|4928|nucleoporin 98kDa##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1	0.0	
chr21	38835466	38835619	reg1013617.p1	9.060	+	NM_130438 NM_001396 U52373 D85759 U58496	-42922	+	D86550 NM_130436	-44336	+	AF108830 NM_101395 AB015283 AB015284	-95672	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	453169	-	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	657859	-	BC013327 NM_002243	793121	+	NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.995354	CTCF.p2:21:0.995
chr8	135917851	135917969	reg1012546.p1	9.060	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-192636	-	TSC_hg19_v1_chr8_-_135725053 AB463359	-192831	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	-209116	-	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	551748	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	552291	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	3591196	-	BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B	0.0	
chr8	79632677	79632799	reg1012939.p1	9.060	+	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	-54418	+	NM_006823 NM_181839 S76965	-204403	+	NM_001172086 NM_001172087	-1719459	-	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	84910	-	NM_001199214 NM_007029	890310	+	TSC_hg19_v1_chr8_+_80523304 D50375	890570	+	NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2##NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2##J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7##NM_001199214|STMN2|11075|stathmin-like 2##NM_007029|STMN2|11075|stathmin-like 2##D50375|STMN2|11075|stathmin-like 2	0.816596	CTCF.p2:6:0.817
chr1	42357352	42357499	reg1014943.p1	9.059	+	BC034393 X55177 M65199 NM_001956	-407106	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-649589	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-649640	-	TSC_hg19_v1_chr1_-_42384357 BC040942	26917	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	26948	-	TSC_hg19_v1_chr1_-_42501606 BC046120	144204	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.02175	
chr14	58338347	58338474	reg1014459.p1	9.059	+	NM_001206920	-5819	-	HQ258368 BC117405 BC143565 BC143566 BC143567 BC143568 AK307238 AK223127 AK001512 BC028060 NM_018168	-377907	-	TSC_hg19_v1_chr14_+_57857318 BC118589 BC122557	-481078	+	BC146861 BX161411 NM_001001872 AK292605 BX161448 TSC_hg19_v1_chr14_-_58618906	280446	-	TSC_hg19_v1_chr14_-_58618916 AK292513	280514	-	TSC_hg19_v1_chr14_+_58666880 NM_018477 AK000544 AF220190 AK222624 AK222702 BC005208 AK022534 AK315537 BC011997 DQ891294 DQ894478 AB529154 CU680156 BX248282	328474	+	NM_001206920|SLC35F4|341880|solute carrier family 35, member F4##HQ258368|C14orf105|55195|chromosome 14 open reading frame 105##BC117405|C14orf105|55195|chromosome 14 open reading frame 105##BC143565|C14orf105|55195|chromosome 14 open reading frame 105##BC143566|C14orf105|55195|chromosome 14 open reading frame 105##BC143567|C14orf105|55195|chromosome 14 open reading frame 105##BC143568|C14orf105|55195|chromosome 14 open reading frame 105##AK307238|C14orf105|55195|chromosome 14 open reading frame 105##AK223127|C14orf105|55195|chromosome 14 open reading frame 105##AK001512|C14orf105|55195|chromosome 14 open reading frame 105##BC028060|C14orf105|55195|chromosome 14 open reading frame 105##NM_018168|C14orf105|55195|chromosome 14 open reading frame 105##BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC146861|C14orf37|145407|chromosome 14 open reading frame 37##BX161411|C14orf37|145407|chromosome 14 open reading frame 37##NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37##AK292605|C14orf37|145407|chromosome 14 open reading frame 37##BX161448|C14orf37|145407|chromosome 14 open reading frame 37##AK292513|C14orf37|145407|chromosome 14 open reading frame 37##NM_018477|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK000544|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AF220190|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK222624|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK222702|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BC005208|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK022534|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK315537|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BC011997|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##DQ891294|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##DQ894478|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BX248282|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	0.992905	CTCF.p2:6:0.993
chr19	35760466	35760598	reg1009294.p1	9.059	+	AB528283 X90826 AY147880 CR536504 TSC_hg19_v1_chr19_+_35760006 AK297022	-499	+	BC049821 TSC_hg19_v1_chr19_+_35759979	-559	+	TSC_hg19_v1_chr19_+_35759895 NM_003367 NM_207291 X90825	-640	+	AF309489 NM_021175 TSC_hg19_v1_chr19_+_35773430 AK096110 BC020612 AF131292 AY358669 AJ277280	12893	+	NM_001199216 NM_002361 NM_080600 AK223562 BC093045 TSC_hg19_v1_chr19_+_35783063 BC034042 AK094545 AK222649 AK308976 M29273 AB209170 AK294644 AK222680 BC053347	22510	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	59559	+	X90826|USF2|7392|upstream transcription factor 2, c-fos interacting##AY147880|USF2|7392|upstream transcription factor 2, c-fos interacting##CR536504|USF2|7392|upstream transcription factor 2, c-fos interacting##AK297022|USF2|7392|upstream transcription factor 2, c-fos interacting##BC049821|USF2|7392|upstream transcription factor 2, c-fos interacting##NM_003367|USF2|7392|upstream transcription factor 2, c-fos interacting##NM_207291|USF2|7392|upstream transcription factor 2, c-fos interacting##X90825|USF2|7392|upstream transcription factor 2, c-fos interacting##AF309489|HAMP|57817|hepcidin antimicrobial peptide##NM_021175|HAMP|57817|hepcidin antimicrobial peptide##AK096110|HAMP|57817|hepcidin antimicrobial peptide##BC020612|HAMP|57817|hepcidin antimicrobial peptide##AF131292|HAMP|57817|hepcidin antimicrobial peptide##AY358669|HAMP|57817|hepcidin antimicrobial peptide##AJ277280|HAMP|57817|hepcidin antimicrobial peptide##NM_001199216|MAG|4099|myelin associated glycoprotein##NM_002361|MAG|4099|myelin associated glycoprotein##NM_080600|MAG|4099|myelin associated glycoprotein##AK223562|MAG|4099|myelin associated glycoprotein##BC093045|MAG|4099|myelin associated glycoprotein##BC034042|MAG|4099|myelin associated glycoprotein##AK094545|MAG|4099|myelin associated glycoprotein##AK222649|MAG|4099|myelin associated glycoprotein##AK308976|MAG|4099|myelin associated glycoprotein##M29273|MAG|4099|myelin associated glycoprotein##AK294644|MAG|4099|myelin associated glycoprotein##AK222680|MAG|4099|myelin associated glycoprotein##BC053347|MAG|4099|myelin associated glycoprotein##NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule	0.239433	CTCF.p2:9:0.239
chr7	130692339	130692456	reg1012921.p2	9.059	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-273470	-	AF294347 AF431815 BC038415 NM_052933	-321042	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-338802	-	TSC_hg19_v1_chr7_-_130792857 BC047367	100462	-	AK294384 NM_001145354	102457	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	320209	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.306804	CTCF.p2:3:0.307
chrX	131874686	131874830	reg1014556.p2	9.059	+	BC042090 NM_001170704 TSC_hg19_v1_chrX_-_131624064	-250725	-	AF491305 EU446986 BC074775 BC074776 AB077698 AB077699 AF467070 AJ427918 AJ427919 AY072692 NM_018388 NM_133486	-301081	-	AY372211 AK002178 NM_001170701 NM_001170702 AK300248 NM_001170703	-327173	-	TSC_hg19_v1_chrX_-_132091486 BC037325 AK295118 AL049679 AB067777 AB067776 AK295041	216643	-	AK075402 TSC_hg19_v1_chrX_-_132092281 BC094718	217498	-	AK056706 NM_001077188 NM_147175	220664	-	BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)##EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC037325|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295118|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AL049679|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067777|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067776|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295041|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK056706|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_001077188|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_147175|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2	0.547551	CTCF.p2:-15:0.548
chr10	98525535	98525663	reg1013820.p1	9.058	+	BX648550 TSC_hg19_v1_chr10_-_98480272 AK125635 NM_152309	-45358	-	TSC_hg19_v1_chr10_-_98346798 AF269150 BC136788 BC136789 BC144412 NM_020123	-178776	-	TSC_hg19_v1_chr10_-_98346770 AK314348	-178821	-	TSC_hg19_v1_chr10_+_98592020 NM_001170765 NM_001170766 AL832106 AK308356 BC053359	66454	+	TSC_hg19_v1_chr10_-_98592186 AB593180	66601	-	TSC_hg19_v1_chr10_+_98592758 NM_032440 AL834245 AB058698	67129	+	BX648550|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AK125635|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_152309|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3##BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3##AK314348|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor##AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor##BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor##AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor##AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor	0.991728	CTCF.p2:0:0.992
chr1	103572021	103572141	reg1013536.p1	9.058	+	AB208844 TSC_hg19_v1_chr1_-_103496798	-75298	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	-1109291	-	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	-1109594	-	J04177 TSC_hg19_v1_chr1_-_103574032 BC117697	1890	-	NM_001190709 NM_001854 NM_080629 NM_080630 TSC_hg19_v1_chr1_-_103574051	1970	-	AK289844 TSC_hg19_v1_chr1_+_104068344 AB058742	496250	+	AB208844|COL11A1|1301|collagen, type XI, alpha 1##NM_058170|OLFM3|118427|olfactomedin 3##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##J04177|COL11A1|1301|collagen, type XI, alpha 1##BC117697|COL11A1|1301|collagen, type XI, alpha 1##NM_001190709|COL11A1|1301|collagen, type XI, alpha 1##NM_001854|COL11A1|1301|collagen, type XI, alpha 1##NM_080629|COL11A1|1301|collagen, type XI, alpha 1##NM_080630|COL11A1|1301|collagen, type XI, alpha 1##AK289844|RNPC3|55599|RNA-binding region (RNP1, RRM) containing 3	0.994585	CTCF.p2:-14:0.995
chr1	53647828	53647924	reg1014018.p2	9.058	+	JF917096 CU680222 DQ892299 DQ895498 BC012119 BC017242 AB593061 BC000651 NM_006671 AB593059 AB593060	-39665	-	TSC_hg19_v1_chr1_+_53527884 AY358294 AK314096 AK300847 AK296649 AK299375 AK304599 AY313607 BC030608 NM_001199081 CU688942 BC028292	-120015	+	NM_001199080 NM_001199082 NM_153703 TSC_hg19_v1_chr1_+_53527759	-120135	+	NM_000098 U09648	14224	+	TSC_hg19_v1_chr1_+_53662495 BC002445 BC005172 AK312687 M58581	14620	+	TSC_hg19_v1_chr1_-_53686277 AK000587 BC010908 NM_017887	38398	-	JF917096|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##DQ892299|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##DQ895498|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##BC012119|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##BC017242|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##AB593061|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##BC000651|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##NM_006671|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##AB593059|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##AB593060|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##AY358294|PODN|127435|podocan##AK314096|PODN|127435|podocan##AK300847|PODN|127435|podocan##AK296649|PODN|127435|podocan##AK299375|PODN|127435|podocan##AK304599|PODN|127435|podocan##AY313607|PODN|127435|podocan##BC030608|PODN|127435|podocan##NM_001199081|PODN|127435|podocan##BC028292|PODN|127435|podocan##NM_001199080|PODN|127435|podocan##NM_001199082|PODN|127435|podocan##NM_153703|PODN|127435|podocan##NM_000098|CPT2|1376|carnitine palmitoyltransferase 2##U09648|CPT2|1376|carnitine palmitoyltransferase 2##BC002445|CPT2|1376|carnitine palmitoyltransferase 2##BC005172|CPT2|1376|carnitine palmitoyltransferase 2##AK312687|CPT2|1376|carnitine palmitoyltransferase 2##M58581|CPT2|1376|carnitine palmitoyltransferase 2##AK000587|C1orf123|54987|chromosome 1 open reading frame 123##BC010908|C1orf123|54987|chromosome 1 open reading frame 123##NM_017887|C1orf123|54987|chromosome 1 open reading frame 123	0.69039	CTCF.p2:-6:0.690
chr20	36858306	36858430	reg1016634.p1	9.058	+	TSC_hg19_v1_chr20_-_36793673 AK291714 AK058031 AK295775 AK300292 AK314618 BC003551 NM_004613 NM_198951	-64689	-	TSC_hg19_v1_chr20_-_36758362 M98479	-99977	-	TSC_hg19_v1_chr20_+_36662228 AB463518 CU689672	-196091	+	AK096202 NM_001029864	30805	-	NM_001725 BC040955 TSC_hg19_v1_chr20_+_36932591 AK315328 AX713278 AX746123 AX752831 J04739 AK296568 BC032230 CU691936 DQ414688 AF322588	74220	+	TSC_hg19_v1_chr20_+_36974884 AK313625 BC022256 NM_004139 AY344471 AF105067 AB590524 CU692512 DQ891394 DQ894434 M35533	116503	+	AK291714|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK058031|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK295775|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK300292|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK314618|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC003551|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_004613|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_198951|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##M98479|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755##NM_001725|BPI|671|bactericidal/permeability-increasing protein##BC040955|BPI|671|bactericidal/permeability-increasing protein##AK315328|BPI|671|bactericidal/permeability-increasing protein##AX713278|BPI|671|bactericidal/permeability-increasing protein##AX746123|BPI|671|bactericidal/permeability-increasing protein##AX752831|BPI|671|bactericidal/permeability-increasing protein##J04739|BPI|671|bactericidal/permeability-increasing protein##AK296568|BPI|671|bactericidal/permeability-increasing protein##BC032230|BPI|671|bactericidal/permeability-increasing protein##DQ414688|BPI|671|bactericidal/permeability-increasing protein##AF322588|BPI|671|bactericidal/permeability-increasing protein##AK313625|LBP|3929|lipopolysaccharide binding protein##BC022256|LBP|3929|lipopolysaccharide binding protein##NM_004139|LBP|3929|lipopolysaccharide binding protein##AY344471|LBP|3929|lipopolysaccharide binding protein##AF105067|LBP|3929|lipopolysaccharide binding protein##DQ891394|LBP|3929|lipopolysaccharide binding protein##DQ894434|LBP|3929|lipopolysaccharide binding protein##M35533|LBP|3929|lipopolysaccharide binding protein	0.999816	CTCF.p2:-13:1.000
chr5	145076932	145077074	reg1016975.p1	9.058	+	AK292477 CR749266 NM_020768	-1526588	+	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	-1526757	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	-1526827	-	TSC_hg19_v1_chr5_-_145214906 BC028175 AK095695 AK125215 NM_182960 NM_205846 BC012033 NM_138492	137885	-	NM_001080516	175527	-	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	239168	+	AK292477|KCTD16|57528|potassium channel tetramerisation domain containing 16##CR749266|KCTD16|57528|potassium channel tetramerisation domain containing 16##NM_020768|KCTD16|57528|potassium channel tetramerisation domain containing 16##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC028175|PRELID2|153768|PRELI domain containing 2##AK095695|PRELID2|153768|PRELI domain containing 2##AK125215|PRELID2|153768|PRELI domain containing 2##NM_182960|PRELID2|153768|PRELI domain containing 2##NM_205846|PRELID2|153768|PRELI domain containing 2##BC012033|PRELID2|153768|PRELI domain containing 2##NM_138492|PRELID2|153768|PRELI domain containing 2##NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2	0.969238	CTCF.p2:-3:0.969
chr1	146745512	146745638	reg1011296.p1	9.057	+	TSC_hg19_v1_chr1_+_146714335 AK298424 AK297135 BC077717 AK293157 BC001171 AF054177 BC043501 BC053354 BC005038	-31211	+	NM_004284 TSC_hg19_v1_chr1_+_146714333 EF560738 AF537213 AK001342 AK027631 AK307400	-31264	+	AK314647 TSC_hg19_v1_chr1_-_146697221 AK022172 NM_001144829 NM_001144830 NM_001461	-48383	-	NM_004326 Y13620 AK298105 TSC_hg19_v1_chr1_+_147013319	267676	+	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	396919	-	BC013313 NM_181703	487123	-	AK298424|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK297135|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC077717|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK293157|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC001171|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF054177|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC043501|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC053354|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC005038|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##NM_004284|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##EF560738|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF537213|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK001342|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK027631|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK307400|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK314647|FMO5|2330|flavin containing monooxygenase 5##AK022172|FMO5|2330|flavin containing monooxygenase 5##NM_001144829|FMO5|2330|flavin containing monooxygenase 5##NM_001144830|FMO5|2330|flavin containing monooxygenase 5##NM_001461|FMO5|2330|flavin containing monooxygenase 5##NM_004326|BCL9|607|B-cell CLL/lymphoma 9##Y13620|BCL9|607|B-cell CLL/lymphoma 9##AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa	0.999864	CTCF.p2:-4:1.000
chr15	91790946	91791046	reg1014070.p1	9.057	+	AB018278 TSC_hg19_v1_chr15_+_91769341 CR457086 DQ891614 EU176590	-21585	+	TSC_hg19_v1_chr15_+_91643558 AF052188	-147437	+	TSC_hg19_v1_chr15_+_91643505 NM_014848 BC030011	-147510	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	605947	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	606101	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	606571	+	AB018278|SV2B|9899|synaptic vesicle glycoprotein 2B##CR457086|SV2B|9899|synaptic vesicle glycoprotein 2B##DQ891614|SV2B|9899|synaptic vesicle glycoprotein 2B##EU176590|SV2B|9899|synaptic vesicle glycoprotein 2B##AF052188|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_014848|SV2B|9899|synaptic vesicle glycoprotein 2B##BC030011|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	0.984207	CTCF.p2:9:0.984
chr9	112580276	112580408	reg1015312.p1	9.057	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	-37727	+	BC039306 NM_001037293 AK095003	-177273	+	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	-319753	-	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	230567	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	230621	+	NM_001136562 AK300427	307450	+	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2	0.903909	CTCF.p2:3:0.904
chr16	66304444	66304571	reg1017482.p1	9.056	+	TSC_hg19_v1_chr16_-_65155987 AK297377	-1148513	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	-1148539	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	-1148605	-	NM_001795 TSC_hg19_v1_chr16_+_66400538	96026	+	TSC_hg19_v1_chr16_+_66400559 U84722	96053	+	AK300461 TSC_hg19_v1_chr16_+_66400593 X59796 AK300299 AB209908 AB035304 BC096363 BC096364 BC096365 BC117520	96095	+	AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	0.997788	CTCF.p2:2:0.998
chr5	169407747	169407857	reg1012489.p2	9.056	+	AK055998 NM_001129891	-59	-	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-343502	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-343558	+	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	125169	+	BC030767 NM_001102609 BC092511	252194	+	BT007273 FN432830 DQ890681 DQ893863 AB527802 TSC_hg19_v1_chr5_-_169724688	316849	-	AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58##BT007273|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##FN432830|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ890681|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ893863|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	0.584139	CTCF.p2:3:0.504
chr6	49590915	49591020	reg1012096.p1	9.056	+	TSC_hg19_v1_chr6_+_49518472 CU691450	-72468	+	AK289889 TSC_hg19_v1_chr6_+_49518380 BC036917 AK054918	-72595	+	NM_001145652	-72855	+	AF031548 AB590393 DQ892782 DQ896030 AF031549 AF178841 AF179682 AF179684 AF179685 AF187847 BC012605 X64594 AK313505 NM_000324	13588	-	AK223337 M25532 BC022011 BC107707 X95239 AY289796 AY292863 AY773479 AK292385 AY292862 NM_001142407 NM_001142408 NM_001142417 NM_001142435 NM_003296	90304	-	BC069602 X95240 AK223380 X94323 AK303966 AK313387 AK292786 NM_001190986 NM_006061	121144	-	AK289889|C6orf141|135398|chromosome 6 open reading frame 141##BC036917|C6orf141|135398|chromosome 6 open reading frame 141##AK054918|C6orf141|135398|chromosome 6 open reading frame 141##NM_001145652|C6orf141|135398|chromosome 6 open reading frame 141##AF031548|RHAG|6005|Rh-associated glycoprotein##DQ892782|RHAG|6005|Rh-associated glycoprotein##DQ896030|RHAG|6005|Rh-associated glycoprotein##AF031549|RHAG|6005|Rh-associated glycoprotein##AF178841|RHAG|6005|Rh-associated glycoprotein##AF179682|RHAG|6005|Rh-associated glycoprotein##AF179684|RHAG|6005|Rh-associated glycoprotein##AF179685|RHAG|6005|Rh-associated glycoprotein##AF187847|RHAG|6005|Rh-associated glycoprotein##BC012605|RHAG|6005|Rh-associated glycoprotein##X64594|RHAG|6005|Rh-associated glycoprotein##AK313505|RHAG|6005|Rh-associated glycoprotein##NM_000324|RHAG|6005|Rh-associated glycoprotein##AK223337|CRISP2|7180|cysteine-rich secretory protein 2##M25532|CRISP2|7180|cysteine-rich secretory protein 2##BC022011|CRISP2|7180|cysteine-rich secretory protein 2##BC107707|CRISP2|7180|cysteine-rich secretory protein 2##X95239|CRISP2|7180|cysteine-rich secretory protein 2##AY289796|CRISP2|7180|cysteine-rich secretory protein 2##AY292863|CRISP2|7180|cysteine-rich secretory protein 2##AY773479|CRISP2|7180|cysteine-rich secretory protein 2##AK292385|CRISP2|7180|cysteine-rich secretory protein 2##AY292862|CRISP2|7180|cysteine-rich secretory protein 2##NM_001142407|CRISP2|7180|cysteine-rich secretory protein 2##NM_001142408|CRISP2|7180|cysteine-rich secretory protein 2##NM_001142417|CRISP2|7180|cysteine-rich secretory protein 2##NM_001142435|CRISP2|7180|cysteine-rich secretory protein 2##NM_003296|CRISP2|7180|cysteine-rich secretory protein 2##BC069602|CRISP3|10321|cysteine-rich secretory protein 3##X95240|CRISP3|10321|cysteine-rich secretory protein 3##AK223380|CRISP3|10321|cysteine-rich secretory protein 3##X94323|CRISP3|10321|cysteine-rich secretory protein 3##AK303966|CRISP3|10321|cysteine-rich secretory protein 3##AK313387|CRISP3|10321|cysteine-rich secretory protein 3##AK292786|CRISP3|10321|cysteine-rich secretory protein 3##NM_001190986|CRISP3|10321|cysteine-rich secretory protein 3##NM_006061|CRISP3|10321|cysteine-rich secretory protein 3	0.434835	CTCF.p2:-14:0.420
chr17	58114571	58114704	reg1015195.p1	9.055	+	BC006971 TSC_hg19_v1_chr17_-_58042099 AK294806 AK296197 NM_016125	-72530	-	TSC_hg19_v1_chr17_-_58042085 AK295162 BC088365	-72559	-	TSC_hg19_v1_chr17_+_57970492 AK300202 AK312875 BC053365 M60724 AB384946 CU690966 AK297147	-144095	+	TSC_hg19_v1_chr17_-_58156283 AK127708 AK314655 BC119771 BC119813 BX640819 BX640831 CR627418 NM_022070 AF349752	41717	-	TSC_hg19_v1_chr17_-_58213006 AK311448	98374	-	TSC_hg19_v1_chr17_+_58227302 BC057792 NM_000717 AK289715 AK298710	112653	+	BC006971|RNFT1|51136|ring finger protein, transmembrane 1##AK294806|RNFT1|51136|ring finger protein, transmembrane 1##AK296197|RNFT1|51136|ring finger protein, transmembrane 1##NM_016125|RNFT1|51136|ring finger protein, transmembrane 1##AK295162|RNFT1|51136|ring finger protein, transmembrane 1##BC088365|RNFT1|51136|ring finger protein, transmembrane 1##AK300202|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK312875|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC053365|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##M60724|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK297147|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK127708|HEATR6|63897|HEAT repeat containing 6##AK314655|HEATR6|63897|HEAT repeat containing 6##BC119771|HEATR6|63897|HEAT repeat containing 6##BC119813|HEATR6|63897|HEAT repeat containing 6##BX640819|HEATR6|63897|HEAT repeat containing 6##BX640831|HEATR6|63897|HEAT repeat containing 6##CR627418|HEATR6|63897|HEAT repeat containing 6##NM_022070|HEATR6|63897|HEAT repeat containing 6##AF349752|HEATR6|63897|HEAT repeat containing 6##BC057792|CA4|762|carbonic anhydrase IV##NM_000717|CA4|762|carbonic anhydrase IV##AK289715|CA4|762|carbonic anhydrase IV##AK298710|CA4|762|carbonic anhydrase IV	0.806587	CTCF.p2:0:0.807
chr4	78354647	78354775	reg1014184.p2	9.055	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-275218	+	TSC_hg19_v1_chr4_+_78078398 U47414	-276251	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	-276350	+	AF044197 NM_006419	78194	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	385833	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	429203	+	L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1	0.952588	CTCF.p2:21:0.953
chr8	26528168	26528290	reg1015604.p1	9.055	+	NM_001244604 TSC_hg19_v1_chr8_+_26435921 AK299077	-92302	+	TSC_hg19_v1_chr8_+_26435604 U17279 AB370194 AB590733 BT006944 CU691152	-92549	+	TSC_hg19_v1_chr8_+_26435468 AK223557 BC056408 D78013 BC010880 AK291287	-92702	+	U02569 AY491775 AY491776 AY491777 AY491778 AY491779 AY491780 AY491781 D25235 D32201 D32202 NM_000680 NM_033302 NM_033303 NM_033304	194689	-	AK311558 TSC_hg19_v1_chr8_-_26724735	196505	-	TSC_hg19_v1_chr8_-_26724764 AK289548	196529	-	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2##AK299077|DPYSL2|1808|dihydropyrimidinase-like 2##U17279|DPYSL2|1808|dihydropyrimidinase-like 2##AB370194|DPYSL2|1808|dihydropyrimidinase-like 2##AK223557|DPYSL2|1808|dihydropyrimidinase-like 2##BC056408|DPYSL2|1808|dihydropyrimidinase-like 2##D78013|DPYSL2|1808|dihydropyrimidinase-like 2##AK291287|DPYSL2|1808|dihydropyrimidinase-like 2##U02569|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491775|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491776|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491777|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491778|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491780|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491781|ADRA1A|148|adrenergic, alpha-1A-, receptor##D25235|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32201|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32202|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_000680|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033302|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033303|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033304|ADRA1A|148|adrenergic, alpha-1A-, receptor##AK289548|ADRA1A|148|adrenergic, alpha-1A-, receptor	0.999665	CTCF.p2:-3:1.000
chr15	100270257	100270381	reg1015436.p1	9.054	+	NM_001130928 BC053871 CU680614 AB384809 AM392739 AM393856 EU446488 CU691046	-97050	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	-164084	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	-164125	+	TSC_hg19_v1_chr15_-_100273591 BC084545 AK124852	3247	-	BX640928 TSC_hg19_v1_chr15_-_100273612	3285	-	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	3315	-	NM_001130928|MEF2A|4205|myocyte enhancer factor 2A##BC053871|MEF2A|4205|myocyte enhancer factor 2A##AM392739|MEF2A|4205|myocyte enhancer factor 2A##AM393856|MEF2A|4205|myocyte enhancer factor 2A##EU446488|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC084545|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK124852|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4	0.07217	
chr17	34985876	34985979	reg1011016.p1	9.054	+	AK292307 NM_024864 BC072411	-27876	+	TSC_hg19_v1_chr17_+_34948329 NM_024308 AK315735 AY358712 BC002731	-37639	+	TSC_hg19_v1_chr17_+_34901498 AK290687 AF126964	-84415	+	BC084573 TSC_hg19_v1_chr17_-_35293961	308013	-	BC020470 NM_005568	308844	+	AK057229 NM_012138 TSC_hg19_v1_chr17_+_35306253 AF083208 BC000591 AJ249940 AB385572 CU674286 DQ892097 DQ895290	320372	+	AK292307|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024864|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##BC072411|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024308|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK315735|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AY358712|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##BC002731|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK290687|GGNBP2|79893|gametogenetin binding protein 2##AF126964|GGNBP2|79893|gametogenetin binding protein 2##BC020470|LHX1|3975|LIM homeobox 1##NM_005568|LHX1|3975|LIM homeobox 1##AK057229|AATF|26574|apoptosis antagonizing transcription factor##NM_012138|AATF|26574|apoptosis antagonizing transcription factor##AF083208|AATF|26574|apoptosis antagonizing transcription factor##BC000591|AATF|26574|apoptosis antagonizing transcription factor##AJ249940|AATF|26574|apoptosis antagonizing transcription factor##DQ892097|AATF|26574|apoptosis antagonizing transcription factor##DQ895290|AATF|26574|apoptosis antagonizing transcription factor	0.950379	CTCF.p2:-14:0.950
chr7	92462407	92462511	reg1012458.p2	9.054	+	TSC_hg19_v1_chr7_-_92219705 BC079834 BC090868 BC057771 AK125498 AL833918 BC017874 NM_001040057 NM_152789 BC062706	-242761	-	TSC_hg19_v1_chr7_-_92219660 BC032461 BC157872	-242817	-	BC104865 BC104867 BC143576 NM_032120 CR933641 BC044570 AL136619 BC020919 BC033561 CR936726 AK294626 AK294812 AF161422 BC065716 CR533549	-304353	+	AB528631 CU690894 X66365 TSC_hg19_v1_chr7_-_92462894	308	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	761	-	AK313491 TSC_hg19_v1_chr7_-_92465884	3439	-	BC090868|FAM133B|257415|family with sequence similarity 133, member B##BC057771|FAM133B|257415|family with sequence similarity 133, member B##AK125498|FAM133B|257415|family with sequence similarity 133, member B##AL833918|FAM133B|257415|family with sequence similarity 133, member B##BC017874|FAM133B|257415|family with sequence similarity 133, member B##NM_001040057|FAM133B|257415|family with sequence similarity 133, member B##NM_152789|FAM133B|257415|family with sequence similarity 133, member B##BC062706|FAM133B|257415|family with sequence similarity 133, member B##BC032461|FAM133B|257415|family with sequence similarity 133, member B##BC157872|FAM133B|257415|family with sequence similarity 133, member B##BC104865|RBM48|84060|RNA binding motif protein 48##BC104867|RBM48|84060|RNA binding motif protein 48##BC143576|RBM48|84060|RNA binding motif protein 48##NM_032120|RBM48|84060|RNA binding motif protein 48##CR933641|RBM48|84060|RNA binding motif protein 48##BC044570|RBM48|84060|RNA binding motif protein 48##AL136619|RBM48|84060|RNA binding motif protein 48##BC020919|RBM48|84060|RNA binding motif protein 48##BC033561|RBM48|84060|RNA binding motif protein 48##CR936726|RBM48|84060|RNA binding motif protein 48##AK294626|RBM48|84060|RNA binding motif protein 48##AK294812|RBM48|84060|RNA binding motif protein 48##AF161422|RBM48|84060|RNA binding motif protein 48##BC065716|RBM48|84060|RNA binding motif protein 48##CR533549|RBM48|84060|RNA binding motif protein 48##X66365|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6	0.619429	CTCF.p2:-3:0.619
chrX	40327709	40327871	reg1013375.p2	9.054	+	BC114220 NM_001123383 NM_001123384	-291209	-	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	-371098	-	TSC_hg19_v1_chrX_+_38663536 AK001248	-1664250	+	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	112396	+	AF291814 TSC_hg19_v1_chrX_+_40440231 AK293510 BC084541 AK297007 AF109363	112452	+	TSC_hg19_v1_chrX_+_40440264 AK314633 AK315948	112482	+	BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF291814|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK293510|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##BC084541|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK297007|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF109363|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK314633|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK315948|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.94474	CTCF.p2:9:0.945
chr3	28370164	28370317	reg1014680.p1	9.053	+	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	-87142	+	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	-606039	-	AB031038 BC131712 NM_005442 AB463608 BC037568	-606447	-	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	20142	-	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	20321	-	NM_001040432	61746	+	CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2	0.297192	CTCF.p2:1:0.297
chr16	12667793	12667919	reg1012566.p2	9.052	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-597283	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-608772	+	NM_001130007	-657338	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	229795	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	229863	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	327612	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.983896	CTCF.p2:-27:0.984
chr19	56616615	56616717	reg1011081.p1	9.052	+	AB527195 AY054986 AY154460 NM_153447	-105576	+	NM_176811 AB527377 AY154463	-157434	+	AB527194 AY154468 NM_176810	-172978	-	TSC_hg19_v1_chr19_-_56632629 BC037737	15948	-	TSC_hg19_v1_chr19_-_56632646 BC012495 BC077728 NM_001002836	15980	-	TSC_hg19_v1_chr19_+_56652664 NM_001253792 NM_018337 AL834130 AK223408	35939	+	AY054986|NLRP5|126206|NLR family, pyrin domain containing 5##AY154460|NLRP5|126206|NLR family, pyrin domain containing 5##NM_153447|NLRP5|126206|NLR family, pyrin domain containing 5##NM_176811|NLRP8|126205|NLR family, pyrin domain containing 8##AY154463|NLRP8|126205|NLR family, pyrin domain containing 8##AY154468|NLRP13|126204|NLR family, pyrin domain containing 13##NM_176810|NLRP13|126204|NLR family, pyrin domain containing 13##BC037737|ZNF787|126208|zinc finger protein 787##BC012495|ZNF787|126208|zinc finger protein 787##BC077728|ZNF787|126208|zinc finger protein 787##NM_001002836|ZNF787|126208|zinc finger protein 787##NM_001253792|ZNF444|55311|zinc finger protein 444##NM_018337|ZNF444|55311|zinc finger protein 444##AL834130|ZNF444|55311|zinc finger protein 444##AK223408|ZNF444|55311|zinc finger protein 444	0.92167	CTCF.p2:-23:0.922
chr8	145049109	145049246	reg1012864.p1	9.052	+	AY480045 NM_201378 TSC_hg19_v1_chr8_-_145047698	-1508	-	TSC_hg19_v1_chr8_-_145028003 AY480046 NM_201379	-21146	-	AY480047 NM_201380 TSC_hg19_v1_chr8_-_145025086	-24107	-	TSC_hg19_v1_chr8_-_145050917 U53204 NM_000445	1750	-	AK303317 TSC_hg19_v1_chr8_-_145060590 AK128537 BC132961 BC136542 BC144235	11400	-	AK027370 TSC_hg19_v1_chr8_-_145060609 AK309251 BC030549 BC020378 AK222914 AK308657 NM_032789	11437	-	AY480045|PLEC|5339|plectin##NM_201378|PLEC|5339|plectin##AY480046|PLEC|5339|plectin##NM_201379|PLEC|5339|plectin##AY480047|PLEC|5339|plectin##NM_201380|PLEC|5339|plectin##U53204|PLEC|5339|plectin##NM_000445|PLEC|5339|plectin##AK303317|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK128537|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC132961|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC136542|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC144235|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK027370|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK309251|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC030549|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC020378|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK222914|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK308657|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##NM_032789|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	0.997032	CTCF.p2:-1:0.997
chr14	77925613	77925755	reg1015476.p1	9.051	+	TSC_hg19_v1_chr14_+_77924438 BC000321 AK313824 AF164791	-1242	+	TSC_hg19_v1_chr14_+_77924412 NM_012111 AK300766 AJ243310	-1294	+	TSC_hg19_v1_chr14_-_77923916 BC015054 AK297388 AK022925 AK022769 AK222706 AK298354 AK098254 NM_001193314 NM_001193315 NM_001193316 NM_001193317 NM_022067	-1749	-	BX248771 BX248277 BX248770 AK056709 AK291600 AK300214 BC101019 BC101020 BC101021 BC101022 CR749863 AJ583024 AK075445 NM_182509 NM_199296	39470	-	CU675001 DQ893297 DQ896786 TSC_hg19_v1_chr14_-_78082949	157251	-	Y08686 TSC_hg19_v1_chr14_-_78082981 BC005123	157310	-	BC000321|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##AK313824|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##AF164791|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##NM_012111|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##AK300766|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##AJ243310|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##BC015054|C14orf133|63894|chromosome 14 open reading frame 133##AK297388|C14orf133|63894|chromosome 14 open reading frame 133##AK022925|C14orf133|63894|chromosome 14 open reading frame 133##AK022769|C14orf133|63894|chromosome 14 open reading frame 133##AK222706|C14orf133|63894|chromosome 14 open reading frame 133##AK298354|C14orf133|63894|chromosome 14 open reading frame 133##AK098254|C14orf133|63894|chromosome 14 open reading frame 133##NM_001193314|C14orf133|63894|chromosome 14 open reading frame 133##NM_001193315|C14orf133|63894|chromosome 14 open reading frame 133##NM_001193316|C14orf133|63894|chromosome 14 open reading frame 133##NM_001193317|C14orf133|63894|chromosome 14 open reading frame 133##NM_022067|C14orf133|63894|chromosome 14 open reading frame 133##BX248771|ISM2|145501|isthmin 2 homolog (zebrafish)##BX248277|ISM2|145501|isthmin 2 homolog (zebrafish)##BX248770|ISM2|145501|isthmin 2 homolog (zebrafish)##AK056709|ISM2|145501|isthmin 2 homolog (zebrafish)##AK291600|ISM2|145501|isthmin 2 homolog (zebrafish)##AK300214|ISM2|145501|isthmin 2 homolog (zebrafish)##BC101019|ISM2|145501|isthmin 2 homolog (zebrafish)##BC101020|ISM2|145501|isthmin 2 homolog (zebrafish)##BC101021|ISM2|145501|isthmin 2 homolog (zebrafish)##BC101022|ISM2|145501|isthmin 2 homolog (zebrafish)##CR749863|ISM2|145501|isthmin 2 homolog (zebrafish)##AJ583024|ISM2|145501|isthmin 2 homolog (zebrafish)##AK075445|ISM2|145501|isthmin 2 homolog (zebrafish)##NM_182509|ISM2|145501|isthmin 2 homolog (zebrafish)##NM_199296|ISM2|145501|isthmin 2 homolog (zebrafish)##DQ893297|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##DQ896786|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##Y08686|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##BC005123|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2	0.05165	
chr6	78450258	78450369	reg1014355.p1	9.051	+	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	-277164	-	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	-1668014	-	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-1991304	+	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	1126942	+	BC064611 TSC_hg19_v1_chr6_-_79675737 AK000712	1225439	-	TSC_hg19_v1_chr6_+_79787573 BC036479	1337247	+	BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC064611|PHIP|55023|pleckstrin homology domain interacting protein##AK000712|PHIP|55023|pleckstrin homology domain interacting protein##BC036479|PHIP|55023|pleckstrin homology domain interacting protein	0.995896	CTCF.p2:-3:0.996
chr12	25394246	25394365	reg1014483.p1	9.050	+	AK094491 TSC_hg19_v1_chr12_+_25348215 BC100276 BC071769	-46099	+	TSC_hg19_v1_chr12_+_25348156 AK057730 NM_001001660	-46154	+	BC028415 AK297998 AK302235 AK301763 AK093102 AX747924 BC031047 BC047415 BC057795 NM_001082972 NM_001082973 NM_001204101 NM_001204102 NM_018272 AK304602	-46242	-	TSC_hg19_v1_chr12_-_25403822 BC013572	9510	-	TSC_hg19_v1_chr12_-_25403864 AK292510 NM_004985 NM_033360 BC029545 M54968	9636	-	AK093323 AX748055 NM_152590 BC037957 AK310411 AK302292 NM_001145728 NM_001145729	311891	-	BC100276|LYRM5|144363|LYR motif containing 5##BC071769|LYRM5|144363|LYR motif containing 5##AK057730|LYRM5|144363|LYR motif containing 5##NM_001001660|LYRM5|144363|LYR motif containing 5##BC028415|CASC1|55259|cancer susceptibility candidate 1##AK297998|CASC1|55259|cancer susceptibility candidate 1##AK302235|CASC1|55259|cancer susceptibility candidate 1##AK301763|CASC1|55259|cancer susceptibility candidate 1##AK093102|CASC1|55259|cancer susceptibility candidate 1##BC031047|CASC1|55259|cancer susceptibility candidate 1##BC047415|CASC1|55259|cancer susceptibility candidate 1##BC057795|CASC1|55259|cancer susceptibility candidate 1##NM_001082972|CASC1|55259|cancer susceptibility candidate 1##NM_001082973|CASC1|55259|cancer susceptibility candidate 1##NM_001204101|CASC1|55259|cancer susceptibility candidate 1##NM_001204102|CASC1|55259|cancer susceptibility candidate 1##NM_018272|CASC1|55259|cancer susceptibility candidate 1##AK304602|CASC1|55259|cancer susceptibility candidate 1##BC013572|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##AK292510|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##NM_004985|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##NM_033360|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC029545|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##M54968|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##AK093323|IFLTD1|160492|intermediate filament tail domain containing 1##NM_152590|IFLTD1|160492|intermediate filament tail domain containing 1##BC037957|IFLTD1|160492|intermediate filament tail domain containing 1##AK310411|IFLTD1|160492|intermediate filament tail domain containing 1##AK302292|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145728|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145729|IFLTD1|160492|intermediate filament tail domain containing 1	0.999666	CTCF.p2:0:1.000
chr14	23322762	23322883	reg1001756.p2	9.050	+	Z48481 TSC_hg19_v1_chr14_+_23305913 D26512 X90925 AB385035 CU687944 U41078	-16853	+	X83535 TSC_hg19_v1_chr14_+_23305909	-16913	+	TSC_hg19_v1_chr14_+_23305816 BC039581	-16986	+	TSC_hg19_v1_chr14_+_23340981 NM_014045 AY358399 BX161500	18199	+	TSC_hg19_v1_chr14_+_23341364 AL834518 AK291030 BC113714 BC113716	18600	+	AK299238 AK096283 NM_173527 BC035663	29613	+	Z48481|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##D26512|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##X90925|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##U41078|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##X83535|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##NM_014045|LRP10|26020|low density lipoprotein receptor-related protein 10##AY358399|LRP10|26020|low density lipoprotein receptor-related protein 10##BX161500|LRP10|26020|low density lipoprotein receptor-related protein 10##AL834518|LRP10|26020|low density lipoprotein receptor-related protein 10##AK291030|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113714|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113716|LRP10|26020|low density lipoprotein receptor-related protein 10##AK299238|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##AK096283|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##NM_173527|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##BC035663|REM2|161253|RAS (RAD and GEM)-like GTP binding 2	0.877609	CTCF.p2:3:0.878
chr5	85600908	85601029	reg1015515.p1	9.050	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-1920304	-	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	-1920722	-	AK313713 NM_001884 X17405 X78076 X78075	-2584034	-	TSC_hg19_v1_chr5_+_85913757 AK026505	312790	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	312849	+	TSC_hg19_v1_chr5_+_86563706 CR749722	962717	+	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.187641	
chr6	133102068	133102181	reg1015956.p1	9.050	+	AK292125 NM_078488 TSC_hg19_v1_chr6_-_133084603	-17529	-	BC064641 AB435062 AB435063 AB435064 AB435065 NM_001242350 HQ258282 HQ258449 AB026705 AJ132100 D89974 NM_004665 AK290908 AK298719 BC126145 BC126147 BC144064	-23123	-	U39664 BC096268 AJ132099 BC096265 BC096266 BC096267 TSC_hg19_v1_chr6_-_133035195 AK290425 AK314265 NM_004666	-66936	-	AK124442 BC069570 AK293853 TSC_hg19_v1_chr6_-_133119740 NM_052831 AK289918	17577	-	TSC_hg19_v1_chr6_+_133135707 AK096147 NM_001016 D28378 X53505	33583	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	33595	+	AK292125|VNN2|8875|vanin 2##NM_078488|VNN2|8875|vanin 2##BC064641|VNN2|8875|vanin 2##AB435062|VNN2|8875|vanin 2##AB435063|VNN2|8875|vanin 2##AB435064|VNN2|8875|vanin 2##AB435065|VNN2|8875|vanin 2##NM_001242350|VNN2|8875|vanin 2##HQ258282|VNN2|8875|vanin 2##HQ258449|VNN2|8875|vanin 2##AB026705|VNN2|8875|vanin 2##AJ132100|VNN2|8875|vanin 2##D89974|VNN2|8875|vanin 2##NM_004665|VNN2|8875|vanin 2##AK290908|VNN2|8875|vanin 2##AK298719|VNN2|8875|vanin 2##BC126145|VNN2|8875|vanin 2##BC126147|VNN2|8875|vanin 2##BC144064|VNN2|8875|vanin 2##U39664|VNN1|8876|vanin 1##BC096268|VNN1|8876|vanin 1##AJ132099|VNN1|8876|vanin 1##BC096265|VNN1|8876|vanin 1##BC096266|VNN1|8876|vanin 1##BC096267|VNN1|8876|vanin 1##AK290425|VNN1|8876|vanin 1##AK314265|VNN1|8876|vanin 1##NM_004666|VNN1|8876|vanin 1##AK124442|C6orf192|116843|chromosome 6 open reading frame 192##BC069570|C6orf192|116843|chromosome 6 open reading frame 192##AK293853|C6orf192|116843|chromosome 6 open reading frame 192##NM_052831|C6orf192|116843|chromosome 6 open reading frame 192##AK289918|C6orf192|116843|chromosome 6 open reading frame 192##AK096147|SNORA33|594839|small nucleolar RNA, H/ACA box 33##NM_001016|RPS12|6206|ribosomal protein S12##D28378|RPS12|6206|ribosomal protein S12##X53505|RPS12|6206|ribosomal protein S12##AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12	0.0	
chr10	53182489	53182617	reg1016073.p1	9.049	+	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-348262	+	TSC_hg19_v1_chr10_+_52751129 D45864	-431432	+	TSC_hg19_v1_chr10_+_52750944 AK300110	-431613	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	276794	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	891562	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	1348873	-	NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##D45864|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK300110|PRKG1|5592|protein kinase, cGMP-dependent, type I##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble	0.998763	CTCF.p2:1:0.999
chr1	43043722	43043848	reg1014448.p1	9.048	+	NM_001080850	-43226	+	BC090885 BC101199 BC101200 TSC_hg19_v1_chr1_-_42966086	-77767	-	TSC_hg19_v1_chr1_+_42928956 AL832217	-114837	+	NM_006347 TSC_hg19_v1_chr1_+_43124093 AK310052 AK311979 BC003412 AK309438 AF016371 AF036331 DQ890971 DQ894146 BT019343 CR541899 CR541920	80297	+	TSC_hg19_v1_chr1_+_43148064 NM_004559	104275	+	TSC_hg19_v1_chr1_+_43148096 AK309996 AK311708	104311	+	NM_001080850|CCDC30|728621|coiled-coil domain containing 30##BC101199|TMSB4XP1|7115|thymosin beta 4, X-linked pseudogene 1##BC101200|TMSB4XP1|7115|thymosin beta 4, X-linked pseudogene 1##AL832217|CCDC30|728621|coiled-coil domain containing 30##NM_006347|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AK310052|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AK311979|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##BC003412|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AK309438|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AF016371|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AF036331|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##DQ890971|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##DQ894146|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##BT019343|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##CR541899|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##CR541920|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##NM_004559|YBX1|4904|Y box binding protein 1##AK309996|YBX1|4904|Y box binding protein 1##AK311708|YBX1|4904|Y box binding protein 1	0.991881	CTCF.p2:-16:0.992
chr15	41038806	41038935	reg1014893.p1	9.048	+	TSC_hg19_v1_chr15_+_40987387 D14134 D13804	-51454	+	EU362635 NM_001164270 NM_002875 NM_133487 TSC_hg19_v1_chr15_+_40987377 BC001459 AK291969 AK303089 AK313503 AK131299 NM_001164269	-51519	+	TSC_hg19_v1_chr15_-_40987295 AK125393	-51575	-	BC063844 TSC_hg19_v1_chr15_-_41047430 AK097286 AK092058	8563	-	TSC_hg19_v1_chr15_-_41047453 AK001441 NM_018145 AK123192	8594	-	TSC_hg19_v1_chr15_+_41056274 AK223430 AK311872 NM_005258 BC112262 BC112264 BC143904 HQ258032	17438	+	D14134|RAD51|5888|RAD51 homolog (S. cerevisiae)##D13804|RAD51|5888|RAD51 homolog (S. cerevisiae)##EU362635|RAD51|5888|RAD51 homolog (S. cerevisiae)##NM_001164270|RAD51|5888|RAD51 homolog (S. cerevisiae)##NM_002875|RAD51|5888|RAD51 homolog (S. cerevisiae)##NM_133487|RAD51|5888|RAD51 homolog (S. cerevisiae)##BC001459|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK291969|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK303089|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK313503|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK131299|RAD51|5888|RAD51 homolog (S. cerevisiae)##NM_001164269|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK125393|LOC100505648|100505648|uncharacterized LOC100505648##BC063844|FAM82A2|55177|family with sequence similarity 82, member A2##AK097286|FAM82A2|55177|family with sequence similarity 82, member A2##AK092058|FAM82A2|55177|family with sequence similarity 82, member A2##AK001441|FAM82A2|55177|family with sequence similarity 82, member A2##NM_018145|FAM82A2|55177|family with sequence similarity 82, member A2##AK123192|FAM82A2|55177|family with sequence similarity 82, member A2##AK223430|GCHFR|2644|GTP cyclohydrolase I feedback regulator##AK311872|GCHFR|2644|GTP cyclohydrolase I feedback regulator##NM_005258|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112262|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112264|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC143904|GCHFR|2644|GTP cyclohydrolase I feedback regulator##HQ258032|GCHFR|2644|GTP cyclohydrolase I feedback regulator	0.934479	CTCF.p2:-4:0.934
chr16	32007783	32007874	reg1013857.p1	9.048	+	TSC_hg19_v1_chr16_+_31885159 BC036367 BC127088 BC127089 AK292573	-122624	+	AF220492 TSC_hg19_v1_chr16_+_31885131	-122696	+	TSC_hg19_v1_chr16_+_31885114 AK096390	-122712	+	TSC_hg19_v1_chr16_-_32199418 AK300387	191591	-	AB023508 AB023509 BC096700 BC099842 NM_001243722 AK312220 CR541650	256830	+	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	679605	-	BC036367|ZNF267|10308|zinc finger protein 267##BC127088|ZNF267|10308|zinc finger protein 267##BC127089|ZNF267|10308|zinc finger protein 267##AK292573|ZNF267|10308|zinc finger protein 267##AF220492|ZNF267|10308|zinc finger protein 267##AK096390|ZNF267|10308|zinc finger protein 267##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AB023508|TP53TG3|24150|TP53 target 3##AB023509|TP53TG3|24150|TP53 target 3##BC096700|TP53TG3|24150|TP53 target 3##BC099842|TP53TG3|24150|TP53 target 3##NM_001243722|LOC729264|729264|TP53-target gene 3 protein-like##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3	1.105722	CTCF.p2:11:0.979
chr2	13071470	13071589	reg1014137.p1	9.048	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-213132	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	-213613	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-214276	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	1701292	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	1701322	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	2629900	-	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence	0.783495	CTCF.p2:8:0.783
chr4	139792291	139792437	reg1013651.p2	9.048	+	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	-629000	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-1338722	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-1338772	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	144629	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	213039	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	213247	-	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.982776	CTCF.p2:13:0.983
chr6	27280586	27280707	reg1014332.p2	9.048	+	NM_033482	-636	-	AK097918 AK314037 NM_005865 AF052514 AK303106 AB590521	-65150	+	BC093849 BC093851 TSC_hg19_v1_chr6_+_27114884 AK312232 AB528147 BC134366 BC148293 NM_080596	-165763	+	AF352327 AF336874 BC107050 NM_032030	11912	+	TSC_hg19_v1_chr6_+_27356537 NM_001076781 AK092633 AK294965 AX747641 BC132797	75909	+	TSC_hg19_v1_chr6_-_27440879 BC022992 AK123011 AK312804 NM_007149	160055	-	NM_033482|POM121L2|94026|POM121 membrane glycoprotein-like 2##AK097918|PRSS16|10279|protease, serine, 16 (thymus)##AK314037|PRSS16|10279|protease, serine, 16 (thymus)##NM_005865|PRSS16|10279|protease, serine, 16 (thymus)##AF052514|PRSS16|10279|protease, serine, 16 (thymus)##AK303106|PRSS16|10279|protease, serine, 16 (thymus)##BC093849|HIST1H2AH|85235|histone cluster 1, H2ah##BC093851|HIST1H2AH|85235|histone cluster 1, H2ah##AK312232|HIST1H2AH|85235|histone cluster 1, H2ah##BC134366|HIST1H2AH|85235|histone cluster 1, H2ah##BC148293|HIST1H2AH|85235|histone cluster 1, H2ah##NM_080596|HIST1H2AH|85235|histone cluster 1, H2ah##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83##NM_001076781|ZNF391|346157|zinc finger protein 391##AK092633|ZNF391|346157|zinc finger protein 391##AK294965|ZNF391|346157|zinc finger protein 391##BC132797|ZNF391|346157|zinc finger protein 391##BC022992|ZNF184|7738|zinc finger protein 184##AK123011|ZNF184|7738|zinc finger protein 184##AK312804|ZNF184|7738|zinc finger protein 184##NM_007149|ZNF184|7738|zinc finger protein 184	0.944553	CTCF.p2:-4:0.945
chr8	121951369	121951517	reg1013444.p1	9.048	+	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-126937	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-127173	-	TSC_hg19_v1_chr8_-_121824090 AB590740	-127380	-	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	702183	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	1842468	+	BC042145 TSC_hg19_v1_chr8_+_123794000	1842551	+	NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2	0.66544	CTCF.p2:16:0.665
chr11	124610510	124610645	reg1011674.p1	9.047	+	TSC_hg19_v1_chr11_+_124609854 Y09689 BC002835 BT007325	-667	+	TSC_hg19_v1_chr11_+_124609837 NM_001126181 NM_006176 U89165	-770	+	AF300796 NM_001199922	-64379	-	EU176386 EU176732 TSC_hg19_v1_chr11_-_124622053	11466	-	TSC_hg19_v1_chr11_-_124622090 AK000460 BC007313 NM_014312	11519	-	AY358897 TSC_hg19_v1_chr11_-_124622152 BC012567	11574	-	Y09689|NRGN|4900|neurogranin (protein kinase C substrate, RC3)##BC002835|NRGN|4900|neurogranin (protein kinase C substrate, RC3)##BT007325|NRGN|4900|neurogranin (protein kinase C substrate, RC3)##NM_001126181|NRGN|4900|neurogranin (protein kinase C substrate, RC3)##NM_006176|NRGN|4900|neurogranin (protein kinase C substrate, RC3)##U89165|NRGN|4900|neurogranin (protein kinase C substrate, RC3)##AF300796|SIAE|54414|sialic acid acetylesterase##NM_001199922|SIAE|54414|sialic acid acetylesterase##EU176386|VSIG2|23584|V-set and immunoglobulin domain containing 2##EU176732|VSIG2|23584|V-set and immunoglobulin domain containing 2##AK000460|VSIG2|23584|V-set and immunoglobulin domain containing 2##BC007313|VSIG2|23584|V-set and immunoglobulin domain containing 2##NM_014312|VSIG2|23584|V-set and immunoglobulin domain containing 2##AY358897|VSIG2|23584|V-set and immunoglobulin domain containing 2##BC012567|VSIG2|23584|V-set and immunoglobulin domain containing 2	0.0	
chr1	174231963	174232062	reg1013192.p1	9.047	+	AK095838 TSC_hg19_v1_chr1_+_174128676 AL157958	-103320	+	BC041888 NM_014857 TSC_hg19_v1_chr1_+_174128608	-103412	+	TSC_hg19_v1_chr1_-_173991524 AB007961	-240497	-	BC095532 NM_005684 CU688296 CU688298 BC067456 BC067457 BC067458 BC067459 BC067460 BC069460 HQ995526	185218	+	AB007940 NM_001243765	537022	+	NM_001243763 AL049701	611547	+	AK095838|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL157958|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC041888|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_014857|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC095532|GPR52|9293|G protein-coupled receptor 52##NM_005684|GPR52|9293|G protein-coupled receptor 52##BC067456|GPR52|9293|G protein-coupled receptor 52##BC067457|GPR52|9293|G protein-coupled receptor 52##BC067458|GPR52|9293|G protein-coupled receptor 52##BC067459|GPR52|9293|G protein-coupled receptor 52##BC067460|GPR52|9293|G protein-coupled receptor 52##BC069460|GPR52|9293|G protein-coupled receptor 52##HQ995526|GPR52|9293|G protein-coupled receptor 52##AB007940|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243765|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243763|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL049701|RABGAP1L|9910|RAB GTPase activating protein 1-like	0.649847	CTCF.p2:-6:0.650
chr15	100337509	100337647	reg1013610.p1	9.047	+	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-63944	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-63974	-	TSC_hg19_v1_chr15_-_100273591 BC084545 AK124852	-64012	-	AB527357 AJ315735 NM_139057	544565	-	BC034500 BC034970 NM_178842	747319	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	804831	-	BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC084545|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK124852|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)	1.335629	CTCF.p2:4:1.000	CTCF.p2:-91:0.242
chr10	82142913	82143037	reg1016556.p1	9.046	+	AK093378 AX748088 NM_032372	-26418	+	BC019250 NM_138812 AK125908 AK292542	-26471	-	DQ891073 DQ894256 D49357 X69078 AK290820 BC018359 TSC_hg19_v1_chr10_-_82049413 NM_000429	-93670	-	NM_001243779	24609	+	TSC_hg19_v1_chr10_+_82168316 NM_001243780 NM_001243781 NM_032333 AK075447 AK074643 AK315440 AY359059	25328	+	NM_001243778 NM_001243782 TSC_hg19_v1_chr10_+_82173588 AK126292 AK225387 BC005871 BC071938	30618	+	AK093378|DYDC2|84332|DPY30 domain containing 2##NM_032372|DYDC2|84332|DPY30 domain containing 2##BC019250|DYDC1|143241|DPY30 domain containing 1##NM_138812|DYDC1|143241|DPY30 domain containing 1##AK125908|DYDC1|143241|DPY30 domain containing 1##AK292542|DYDC1|143241|DPY30 domain containing 1##DQ891073|MAT1A|4143|methionine adenosyltransferase I, alpha##DQ894256|MAT1A|4143|methionine adenosyltransferase I, alpha##D49357|MAT1A|4143|methionine adenosyltransferase I, alpha##X69078|MAT1A|4143|methionine adenosyltransferase I, alpha##AK290820|MAT1A|4143|methionine adenosyltransferase I, alpha##BC018359|MAT1A|4143|methionine adenosyltransferase I, alpha##NM_000429|MAT1A|4143|methionine adenosyltransferase I, alpha##NM_001243779|C10orf58|84293|chromosome 10 open reading frame 58##NM_001243780|C10orf58|84293|chromosome 10 open reading frame 58##NM_001243781|C10orf58|84293|chromosome 10 open reading frame 58##NM_032333|C10orf58|84293|chromosome 10 open reading frame 58##AK075447|C10orf58|84293|chromosome 10 open reading frame 58##AK074643|C10orf58|84293|chromosome 10 open reading frame 58##AK315440|C10orf58|84293|chromosome 10 open reading frame 58##AY359059|C10orf58|84293|chromosome 10 open reading frame 58##NM_001243778|C10orf58|84293|chromosome 10 open reading frame 58##NM_001243782|C10orf58|84293|chromosome 10 open reading frame 58##AK126292|C10orf58|84293|chromosome 10 open reading frame 58##AK225387|C10orf58|84293|chromosome 10 open reading frame 58##BC005871|C10orf58|84293|chromosome 10 open reading frame 58##BC071938|C10orf58|84293|chromosome 10 open reading frame 58	0.043797	
chr2	114055308	114055440	reg1013353.p1	9.046	+	S77904 S77905 S77906 X69699 BC001060 AK292191 AK309154 AK225538 NM_003466 NM_013952 NM_013953 NM_013992 TSC_hg19_v1_chr2_-_114036499	-18881	-	TSC_hg19_v1_chr2_+_113993123 AK056052 AK307781 BX537688 AK056355 AK130275	-62104	+	TSC_hg19_v1_chr2_+_113931576 BC035307 BC073151	-123793	+	AK290072 NM_172003 AK303653 AY343910 TSC_hg19_v1_chr2_+_114195398 AY320414 BC120991 BC120992 AK225251 AF452722	139965	+	AK122950 NM_012184 BC136428 AY344639 AF452723	201362	+	AL137714 AK302089 AK308574 TSC_hg19_v1_chr2_+_114341674	286243	+	S77904|PAX8|7849|paired box 8##S77905|PAX8|7849|paired box 8##S77906|PAX8|7849|paired box 8##X69699|PAX8|7849|paired box 8##BC001060|PAX8|7849|paired box 8##AK292191|PAX8|7849|paired box 8##AK309154|PAX8|7849|paired box 8##AK225538|PAX8|7849|paired box 8##NM_003466|PAX8|7849|paired box 8##NM_013952|PAX8|7849|paired box 8##NM_013953|PAX8|7849|paired box 8##NM_013992|PAX8|7849|paired box 8##AK056052|LOC654433|654433|uncharacterized LOC654433##AK307781|LOC654433|654433|uncharacterized LOC654433##BX537688|LOC654433|654433|uncharacterized LOC654433##AK056355|LOC654433|654433|uncharacterized LOC654433##AK130275|LOC654433|654433|uncharacterized LOC654433##BC035307|PSD4|23550|pleckstrin and Sec7 domain containing 4##BC073151|PSD4|23550|pleckstrin and Sec7 domain containing 4##AK290072|CBWD2|150472|COBW domain containing 2##NM_172003|CBWD2|150472|COBW domain containing 2##AK303653|CBWD2|150472|COBW domain containing 2##AY343910|CBWD2|150472|COBW domain containing 2##AY320414|CBWD1|55871|COBW domain containing 1##BC120991|CBWD2|150472|COBW domain containing 2##BC120992|CBWD2|150472|COBW domain containing 2##AK225251|CBWD2|150472|COBW domain containing 2##AF452722|CBWD2|150472|COBW domain containing 2##AK122950|FOXD4L1|200350|forkhead box D4-like 1##NM_012184|FOXD4L1|200350|forkhead box D4-like 1##BC136428|FOXD4L1|200350|forkhead box D4-like 1##AY344639|FOXD4L1|200350|forkhead box D4-like 1##AF452723|FOXD4L1|200350|forkhead box D4-like 1##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene	0.784756	CTCF.p2:-26:0.785
chr11	9187530	9187646	reg1013270.p2	9.045	+	BC111690 AK131552 AK123039 NM_001170690 NM_020974 TSC_hg19_v1_chr11_-_9113185	-74450	-	BC008835 TSC_hg19_v1_chr11_-_9025549 AK024750 AK098694 AK296484 NM_020645	-162025	-	BC040124 TSC_hg19_v1_chr11_-_8986002	-201579	-	TSC_hg19_v1_chr11_-_9225783 AK302478	38233	-	AB029014 TSC_hg19_v1_chr11_-_9286891 BC071596 NM_001243254 NM_015213	99274	-	AK303339 TSC_hg19_v1_chr11_-_9336043 BC064366 BC091524	148471	-	BC111690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK131552|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK123039|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_001170690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_020974|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##BC008835|NRIP3|56675|nuclear receptor interacting protein 3##AK024750|NRIP3|56675|nuclear receptor interacting protein 3##AK098694|NRIP3|56675|nuclear receptor interacting protein 3##AK296484|NRIP3|56675|nuclear receptor interacting protein 3##NM_020645|NRIP3|56675|nuclear receptor interacting protein 3##BC040124|TMEM9B|56674|TMEM9 domain family, member B##AK302478|DENND5A|23258|DENN/MADD domain containing 5A##AB029014|DENND5A|23258|DENN/MADD domain containing 5A##BC071596|DENND5A|23258|DENN/MADD domain containing 5A##NM_001243254|DENND5A|23258|DENN/MADD domain containing 5A##NM_015213|DENND5A|23258|DENN/MADD domain containing 5A##AK303339|TMEM41B|440026|transmembrane protein 41B##BC064366|TMEM41B|440026|transmembrane protein 41B##BC091524|TMEM41B|440026|transmembrane protein 41B	0.738533	CTCF.p2:5:0.739
chr15	57161893	57162017	reg1014449.p2	9.045	+	TSC_hg19_v1_chr15_-_57025818 BX641000 BX640707 NM_001002843 NM_001002844 NM_017661 AK295159	-136123	-	TSC_hg19_v1_chr15_-_57025690 AB046804 BC053649 BC064359 AK310882 AK289739 BC130451 BC136412	-136243	-	TSC_hg19_v1_chr15_-_56757262 BC031046 AK310029 BC012554 BC034991 AK002084 NM_018365	-404669	-	TSC_hg19_v1_chr15_-_57210733 AK096657 BC036541	48781	-	TSC_hg19_v1_chr15_+_57210823 NM_003205 NM_207036 NM_207037 NM_207038	48872	+	TSC_hg19_v1_chr15_+_57210872 AL831981 AK294617 AK310708 AK312710	48913	+	BX641000|ZNF280D|54816|zinc finger protein 280D##BX640707|ZNF280D|54816|zinc finger protein 280D##NM_001002843|ZNF280D|54816|zinc finger protein 280D##NM_001002844|ZNF280D|54816|zinc finger protein 280D##NM_017661|ZNF280D|54816|zinc finger protein 280D##AK295159|ZNF280D|54816|zinc finger protein 280D##AB046804|ZNF280D|54816|zinc finger protein 280D##BC053649|ZNF280D|54816|zinc finger protein 280D##BC064359|ZNF280D|54816|zinc finger protein 280D##AK310882|ZNF280D|54816|zinc finger protein 280D##AK289739|ZNF280D|54816|zinc finger protein 280D##BC130451|ZNF280D|54816|zinc finger protein 280D##BC136412|ZNF280D|54816|zinc finger protein 280D##BC031046|MNS1|55329|meiosis-specific nuclear structural 1##BC012554|MNS1|55329|meiosis-specific nuclear structural 1##BC034991|MNS1|55329|meiosis-specific nuclear structural 1##AK002084|MNS1|55329|meiosis-specific nuclear structural 1##NM_018365|MNS1|55329|meiosis-specific nuclear structural 1##AK096657|LOC145783|145783|uncharacterized LOC145783##NM_003205|TCF12|6938|transcription factor 12##NM_207036|TCF12|6938|transcription factor 12##NM_207037|TCF12|6938|transcription factor 12##NM_207038|TCF12|6938|transcription factor 12##AL831981|TCF12|6938|transcription factor 12##AK294617|TCF12|6938|transcription factor 12##AK310708|TCF12|6938|transcription factor 12##AK312710|TCF12|6938|transcription factor 12	0.850958	CTCF.p2:19:0.851
chr1	228141733	228141844	reg1014103.p1	9.044	+	AB590917 HQ258230 AB060283 AK131041 TSC_hg19_v1_chr1_-_228135634 BC111960 BC113431 NM_003395	-6157	-	BC130400 HQ258179 NM_183062	-138407	+	CU676318 TSC_hg19_v1_chr1_+_227923140 BX648570 AK054633 BC011145 BC007786	-218656	+	NM_033131 AK056278 BC103921 BC103922 BC103923 AB060284	52985	+	AK000620 NM_001024226 NM_001658 TSC_hg19_v1_chr1_+_228270371	128583	+	TSC_hg19_v1_chr1_+_228270422 BC011358 AK293553 AK297792 AK057875 AF052179	128622	+	HQ258230|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AB060283|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AK131041|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC111960|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC113431|WNT9A|7483|wingless-type MMTV integration site family, member 9A##NM_003395|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC130400|PRSS38|339501|protease, serine, 38##HQ258179|PRSS38|339501|protease, serine, 38##NM_183062|PRSS38|339501|protease, serine, 38##BX648570|SNAP47|116841|synaptosomal-associated protein, 47kDa##AK054633|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC011145|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC007786|SNAP47|116841|synaptosomal-associated protein, 47kDa##NM_033131|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK056278|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103921|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103922|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103923|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AB060284|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK000620|ARF1|375|ADP-ribosylation factor 1##NM_001024226|ARF1|375|ADP-ribosylation factor 1##NM_001658|ARF1|375|ADP-ribosylation factor 1##BC011358|ARF1|375|ADP-ribosylation factor 1##AK293553|ARF1|375|ADP-ribosylation factor 1##AK297792|ARF1|375|ADP-ribosylation factor 1##AK057875|ARF1|375|ADP-ribosylation factor 1##AF052179|ARF1|375|ADP-ribosylation factor 1	0.998589	CTCF.p2:-5:0.999
chr19	49934150	49934278	reg1016697.p1	9.044	+	NM_001195256	-4527	+	AY048588 BC093995 BC093997 AY037555 NM_178449	-7567	-	NM_144688 TSC_hg19_v1_chr19_+_49891539 AK057220 AK097696 BC029811	-42698	+	AK294226 AB032436 TSC_hg19_v1_chr19_-_49944785 BC059379 NM_020309	10532	-	TSC_hg19_v1_chr19_-_49955072 AK294687 BC001108 AK000650 AK304476 NM_017916	20855	-	NM_001145396 NM_153329 TSC_hg19_v1_chr19_+_49956479 AK298587 AK074136	22267	+	NM_001195256|LOC100507003|100507003|uncharacterized LOC100507003##AY048588|PTH2|113091|parathyroid hormone 2##BC093995|PTH2|113091|parathyroid hormone 2##BC093997|PTH2|113091|parathyroid hormone 2##AY037555|PTH2|113091|parathyroid hormone 2##NM_178449|PTH2|113091|parathyroid hormone 2##NM_144688|CCDC155|147872|coiled-coil domain containing 155##AK057220|CCDC155|147872|coiled-coil domain containing 155##AK097696|CCDC155|147872|coiled-coil domain containing 155##BC029811|CCDC155|147872|coiled-coil domain containing 155##AK294226|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##AB032436|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##BC059379|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##NM_020309|SLC17A7|57030|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 7##AK294687|PIH1D1|55011|PIH1 domain containing 1##BC001108|PIH1D1|55011|PIH1 domain containing 1##AK000650|PIH1D1|55011|PIH1 domain containing 1##AK304476|PIH1D1|55011|PIH1 domain containing 1##NM_017916|PIH1D1|55011|PIH1 domain containing 1##NM_001145396|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##NM_153329|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK298587|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK074136|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1	0.831146	CTCF.p2:-6:0.831
chr2	70139258	70139399	reg1013342.p2	9.044	+	NM_006857 TSC_hg19_v1_chr2_+_70121093 BC017890 X76302 AK291128 AK312041 CU676102	-18229	+	TSC_hg19_v1_chr2_+_70056924 AB527982 EU832645 EU832722 CU675651	-82357	+	AK024042 TSC_hg19_v1_chr2_+_70056791 BC007420 NM_178439 AK023119	-82521	+	TSC_hg19_v1_chr2_+_70142202 NM_001202513 NM_001202514 NM_002357 BC098396	2865	+	TSC_hg19_v1_chr2_+_70142240 AK301088 AK312734	2922	+	TSC_hg19_v1_chr2_+_70142307 L06895 BC113531 BC117260 BC143831 BC143832 BC144601 BC069377 BC069433 AB463858 CR536495 CR541692 CU686788 HQ258749	3054	+	NM_006857|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##BC017890|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##X76302|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##AK291128|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##AK312041|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##EU832645|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##EU832722|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##NM_001202513|MXD1|4084|MAX dimerization protein 1##NM_001202514|MXD1|4084|MAX dimerization protein 1##NM_002357|MXD1|4084|MAX dimerization protein 1##BC098396|MXD1|4084|MAX dimerization protein 1##AK301088|MXD1|4084|MAX dimerization protein 1##AK312734|MXD1|4084|MAX dimerization protein 1##L06895|MXD1|4084|MAX dimerization protein 1##BC113531|MXD1|4084|MAX dimerization protein 1##BC117260|MXD1|4084|MAX dimerization protein 1##BC143831|MXD1|4084|MAX dimerization protein 1##BC143832|MXD1|4084|MAX dimerization protein 1##BC144601|MXD1|4084|MAX dimerization protein 1##BC069377|MXD1|4084|MAX dimerization protein 1##BC069433|MXD1|4084|MAX dimerization protein 1##CR536495|MXD1|4084|MAX dimerization protein 1##CR541692|MXD1|4084|MAX dimerization protein 1##HQ258749|MXD1|4084|MAX dimerization protein 1	0.999289	CTCF.p2:-31:0.999
chr14	106924921	106925023	reg1013938.p1	9.043	+	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 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AY671766 AY671767 AY671769 AY671771 AY671776 AY671781 AY671784 AY885181 AY941889 AY941914 AY941957 DQ005274 DQ005285 DQ100660 DQ100674 DQ100703 DQ100725 DQ100792 DQ100829 DQ100832 DQ100964 DQ926158 DQ926198 DQ926208 DQ926421 DQ926458 DQ926468 DQ926470 DQ926478 DQ926497 DQ926599 DQ926603 EF544907 EF544958 EF544959 EF544973 FJ208782 FJ492903 FJ492909 FJ492910 GU570373 HM152498 HM152511 HM152516 HQ392880 HQ689741 L12192 L23518 L23934 L25293 M26998 M74468 S64473 S66098 S67110 U00497 U00556 U22391 U71103 U89766 U97246 X56592 X87440 Z35492 Z46269 Z46271 Z46272 Z46273 Z46275 Z46277 Z46279 Z46282 Z46304 Z46305 Z46306 Z46307 Z46308 Z46340 Z46341 Z46342 Z49135 Z49140 Z49141 Z49143 Z70604 Z70605 Z70610 Z70616 Z70617 Z70625 Z70626 Z70627 Z70637 Z70638 Z70639 Z70640 Z70641 Z70642 Z70643 Z70644 Z70650 Z74665 Z74695 AY670806 AY670808 AY957532 AY686937 AY957534 DQ535279 DQ535294 DQ535296 DQ535314 DQ535320 DQ535326 DQ535459 EF178028 EF178136 HM996258 M84508 FJ039792 M84512 X54441 AY671298 AY670999 AY671028 AF283780 AF283781 M74018 M74021 AY670983 AY670985 AY670987 AY670989 AY670992 AY670993 AY670995 AY670997 AY670998 AY671018 AY671025 AY671033 AY671043 AY671307 AY671310 AY671046 AY671049 AY671205 AF283784 AY671151 AY671233 AJ579207 AY670982 AY671003 AY671029 AY671050 AY671156 AY671160 AY671171 AY671177 AY671190 AY671199 AY671201 AY671212 AY671226 AY671232 AY671235 AY671236 AY671250 AY671251 AY671261 AY671262 AY671270 AY671272 AY671278 AY671281 AY671287 AY671308 Z47229 AF062101 AF062146 AF062152 AF062158 AF062173 AF062181 AF062183 AF062187 AF062192 AF062196 AF062217 AF062218 AF062250 AJ579203 AY204755 AY204757 AY204759 AY204761 AY671006 AY671008 AY671061 AY671064 AY671168 AY671175 AY671183 AY671200 AY671207 AY671220 AY671238 AY671258 AY671268 AY671275 AY671289 AY671290 AY671303 AY671305 AY671696 AY671705 AY671713 AY671722 AY671727 AY671728 S59161 X64152 X64153 X65904 Z47228 Z47234 Z47241 Z75362 Z75374 Z75376 Z75379 Z75386 Z75389 Z75392 Z75394 Z75398 CU674902 CU678316 BC002963 BC073767 CU675962 BC017356 BC019235 BC001872 BC006180 BX538126 AK301454 TSC_hg19_v1_chr14_-_106830060 AK126280 AK128649 AK127921 CR933690	-95066	-	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 AF044420 AF044422 AF044425 AF044427 AF044442 AF090355 AF099201 AF174074 AF471431 AJ132850 AJ271549 AJ300787 AJ300793 AJ300798 AJ300803 AJ308463 AJ633622 AJ633623 AY028777 AY033265 AY033266 AY033267 AY530317 AY554176 AY640472 AY640475 AY640477 AY640483 AY640501 AY640511 AY640535 AY640539 AY640541 AY640544 AY640549 AY640550 AY640557 AY640558 AY640561 AY640568 AY640569 AY640573 AY640577 AY685306 AY781859 AY846266 AY846267 AY866744 AY941844 AY941856 AY941857 AY941860 AY941863 AY941865 AY941866 AY941868 AY941892 AY941896 AY941898 AY941901 AY941907 AY941913 AY941935 AY941942 AY941950 AY941953 AY941968 AY941970 AY941982 AY941983 AY941985 AY941986 AY941988 AY941989 AY944708 AY944716 AY971015 AY971027 AY971037 AY971078 AY971081 AY971115 AY971120 AY971130 AY971135 DQ065629 DQ065669 DQ065674 DQ065689 DQ065692 DQ065718 DQ065725 DQ431499 DQ431621 DQ431627 DQ840705 DQ840715 DQ840744 DQ926087 DQ926091 DQ926150 DQ926207 DQ926222 DQ926372 DQ926388 DQ926512 DQ926569 DQ926578 DQ926634 EF177978 EF178004 EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 AY866854 AY882579 AY927661 AY941847 AY941848 AY941861 AY941864 AY941867 AY941869 AY941871 AY941872 AY941874 AY941875 AY941893 AY941894 AY941895 AY941897 AY941904 AY941908 AY941922 AY941932 AY941933 AY941934 AY941944 AY941946 AY941951 AY941954 AY941956 AY941963 AY941964 AY941966 AY941967 AY941969 AY944690 AY971127 D83678 D83681 D83684 D83685 D83694 DQ005284 DQ065696 DQ100659 DQ100685 DQ100775 DQ100819 DQ100846 DQ100857 DQ100907 DQ100930 DQ212508 DQ212509 DQ431475 DQ431476 DQ431501 DQ431573 DQ431575 DQ431576 DQ431580 DQ431582 DQ431606 DQ431607 DQ431622 DQ431628 DQ431633 DQ431634 DQ431637 DQ431642 DQ431643 DQ431646 DQ431653 DQ431658 DQ535263 DQ535266 DQ535268 DQ535293 DQ535308 DQ535373 DQ535382 DQ535397 DQ535424 DQ535426 DQ535429 DQ535437 DQ535439 DQ535440 DQ535461 DQ535466 DQ840703 DQ840706 DQ840712 DQ840713 DQ840745 DQ840782 DQ840813 DQ923052 DQ926032 DQ926064 DQ926133 DQ926340 DQ926374 DQ926384 DQ926552 EF177969 EF177975 EF177991 EF178015 EF178075 EF178091 EF178098 EF178099 EF221755 EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	-133678	-	GQ232933 AY003798 FJ840151 FJ873995 EF407840 AM279492 AM279629 HM774186 AY957513 EF633772 AY062305 DQ524058 AF174122 AY944701 DQ065664 DQ065670 DQ065719 DQ065726 DQ926522 EF178118 EF633803 FJ385316 GU570332 HM995173 HM995251 HM995315 HM995321 HM995523 AB021518 AB021527 AF035043 AF471473 AJ579183 DQ535349 DQ535444 GU570331 GU570333 X95661 Z47231 BC092518 TSC_hg19_v1_chr14_-_106926725 BX647160 AK123783 AK097306 AK097329	1587	-	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	13486	+	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	42328	-	AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF174049|SKAP2|8935|src kinase associated phosphoprotein 2##BC002963|IGHM|3507|immunoglobulin heavy constant mu##BC073767|IGHM|3507|immunoglobulin heavy constant mu##BC017356|IGHM|3507|immunoglobulin heavy constant mu##BC019235|IGHM|3507|immunoglobulin heavy constant mu##BC001872|IGHM|3507|immunoglobulin heavy constant mu##BC006180|IGHM|3507|immunoglobulin heavy constant mu##BX538126|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK126280|IGHD|3495|immunoglobulin heavy constant delta##AK128649|IGHD|3495|immunoglobulin heavy constant delta##AK127921|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.405843	CTCF.p2:-6:0.335
chr6	71396358	71396493	reg1016222.p1	9.043	+	TSC_hg19_v1_chr6_+_71377620 AK315579 BC028074 BC008672 AK303387 BC036123 AK023221 AY055003 AY055004 AK222711 AK290448 CU688386	-18770	+	TSC_hg19_v1_chr6_+_71377511 NM_001044305 NM_021940 AF442495	-18902	+	TSC_hg19_v1_chr6_+_71276632 BC018085 NM_145267 BC104649 GQ129294 GQ129295	-119800	+	AB075843 NM_080742	270338	-	NM_024576 TSC_hg19_v1_chr6_+_71998479	602061	+	TSC_hg19_v1_chr6_+_71998513 BC018688	602085	+	AK315579|SMAP1|60682|small ArfGAP 1##BC028074|SMAP1|60682|small ArfGAP 1##BC008672|SMAP1|60682|small ArfGAP 1##AK303387|SMAP1|60682|small ArfGAP 1##BC036123|SMAP1|60682|small ArfGAP 1##AK023221|SMAP1|60682|small ArfGAP 1##AY055003|SMAP1|60682|small ArfGAP 1##AY055004|SMAP1|60682|small ArfGAP 1##AK222711|SMAP1|60682|small ArfGAP 1##AK290448|SMAP1|60682|small ArfGAP 1##NM_001044305|SMAP1|60682|small ArfGAP 1##NM_021940|SMAP1|60682|small ArfGAP 1##AF442495|SMAP1|60682|small ArfGAP 1##BC018085|C6orf57|135154|chromosome 6 open reading frame 57##NM_145267|C6orf57|135154|chromosome 6 open reading frame 57##BC104649|C6orf57|135154|chromosome 6 open reading frame 57##GQ129294|C6orf57|135154|chromosome 6 open reading frame 57##GQ129295|C6orf57|135154|chromosome 6 open reading frame 57##AB075843|B3GAT2|135152|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)##NM_080742|B3GAT2|135152|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)##NM_024576|OGFRL1|79627|opioid growth factor receptor-like 1##BC018688|OGFRL1|79627|opioid growth factor receptor-like 1	0.982997	CTCF.p2:13:0.983
chr7	32250431	32250539	reg1013859.p2	9.043	+	AK094180 NM_001191059 U40371 NM_005020	-139474	-	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	-139980	-	NM_001145123 NM_006658	-523855	+	NM_001191058	87897	-	TSC_hg19_v1_chr7_-_32529998 AJ238097 AF182291 CU675199 AB463843 BC005938 AK022772 AK024217 NM_012322	279512	-	NM_001130710 NM_001139499	284384	-	AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_001191058|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AJ238097|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182291|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC005938|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK022772|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK024217|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012322|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001130710|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001139499|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.998189	CTCF.p2:-9:0.998
chr1	37924302	37924397	reg1016670.p1	9.042	+	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	-424574	-	NM_000760 NM_156039 NM_172313	-975435	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-975865	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	15748	+	TSC_hg19_v1_chr1_+_37940140 AK026884	15801	+	FJ695517 TSC_hg19_v1_chr1_+_37940180 AK093343 AX748065 BC005001	15838	+	AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A##FJ695517|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK093343|ZC3H12A|80149|zinc finger CCCH-type containing 12A##BC005001|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.49894	CTCF.p2:-5:0.499
chr2	227080775	227080907	reg1014149.p1	9.042	+	NM_020864 BC131727 AB040919	-815196	+	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	-1173493	-	TSC_hg19_v1_chr2_-_225811768 EU236710	-1269087	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	582638	-	TSC_hg19_v1_chr2_-_227664534 S62539	583658	-	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	619889	+	NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##EU236710|DOCK10|55619|dedicator of cytokinesis 10##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##S62539|IRS1|3667|insulin receptor substrate 1##NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1	0.989	CTCF.p2:-16:0.969
chr1	1440964	1441082	reg1014428.p3	9.041	+	TSC_hg19_v1_chr1_+_1407160 NM_031921 AF343078 BC002542 BC018701	-33840	+	AK097309 TSC_hg19_v1_chr1_+_1407157	-33866	+	TSC_hg19_v1_chr1_+_1407144 AK290586	-33889	+	TSC_hg19_v1_chr1_+_1447528 NM_001170535 NM_018188 BC014101	6490	+	TSC_hg19_v1_chr1_+_1447544 AK001571 AK091144 AX746805 BC011814 BC033109 BC007803 BC063607 AF343078 GU189416	6554	+	TSC_hg19_v1_chr1_+_1447871 AK056099 NM_001170536	6867	+	NM_031921|ATAD3B|83858|ATPase family, AAA domain containing 3B##AF343078|ATAD3B|83858|ATPase family, AAA domain containing 3B##BC002542|ATAD3B|83858|ATPase family, AAA domain containing 3B##BC018701|ATAD3B|83858|ATPase family, AAA domain containing 3B##AK290586|ATAD3B|83858|ATPase family, AAA domain containing 3B##NM_001170535|ATAD3A|55210|ATPase family, AAA domain containing 3A##NM_018188|ATAD3A|55210|ATPase family, AAA domain containing 3A##BC014101|ATAD3A|55210|ATPase family, AAA domain containing 3A##AK001571|ATAD3A|55210|ATPase family, AAA domain containing 3A##AK091144|ATAD3A|55210|ATPase family, AAA domain containing 3A##BC011814|ATAD3A|55210|ATPase family, AAA domain containing 3A##BC033109|ATAD3A|55210|ATPase family, AAA domain containing 3A##BC007803|ATAD3A|55210|ATPase family, AAA domain containing 3A##BC063607|ATAD3A|55210|ATPase family, AAA domain containing 3A##AF343078|ATAD3B|83858|ATPase family, AAA domain containing 3B##GU189416|ATAD3A|55210|ATPase family, AAA domain containing 3A##AK056099|ATAD3A|55210|ATPase family, AAA domain containing 3A##NM_001170536|ATAD3A|55210|ATPase family, AAA domain containing 3A	0.830069	CTCF.p2:9:0.830
chr2	130681524	130681667	reg1015386.p1	9.041	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-1605295	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-1753548	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-1832734	+	NM_032144 AL136727	55640	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	205263	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	221016	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.338919	CTCF.p2:-19:0.339
chr3	120277850	120277972	reg1013763.p1	9.040	+	TSC_hg19_v1_chr3_-_120169846 AB527652 D89937 BC000055 U06863 AK300356 AK289388 AK291138 AK311050 AK300436 BX647421 AK312261 NM_007085	-108074	-	TSC_hg19_v1_chr3_-_120068162 AB528173 AM393236 BC013757 NM_001099678	-209770	-	NM_001168271 NM_153002	-314770	-	NM_001168331 NM_004547 BC000855 BC146885 BC146887 BC146927 BC146932 TSC_hg19_v1_chr3_+_120315168	37236	+	TSC_hg19_v1_chr3_+_120315182 BC070285 AF044957 DQ891096 DQ894273 DQ894278 BC034579	37281	+	CU687162 EU831603 EU831690 TSC_hg19_v1_chr3_-_120401087 BC071757 Z75048 U63008 AK290782 BC020792 AF045167	123132	-	BC000055|FSTL1|11167|follistatin-like 1##U06863|FSTL1|11167|follistatin-like 1##AK300356|FSTL1|11167|follistatin-like 1##AK289388|FSTL1|11167|follistatin-like 1##AK291138|FSTL1|11167|follistatin-like 1##AK311050|FSTL1|11167|follistatin-like 1##AK300436|FSTL1|11167|follistatin-like 1##BX647421|FSTL1|11167|follistatin-like 1##AK312261|FSTL1|11167|follistatin-like 1##NM_007085|FSTL1|11167|follistatin-like 1##AM393236|LRRC58|116064|leucine rich repeat containing 58##BC013757|LRRC58|116064|leucine rich repeat containing 58##NM_001099678|LRRC58|116064|leucine rich repeat containing 58##NM_001168271|GPR156|165829|G protein-coupled receptor 156##NM_153002|GPR156|165829|G protein-coupled receptor 156##NM_001168331|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##NM_004547|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC000855|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146885|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146887|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146927|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146932|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC070285|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##AF044957|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ891096|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ894273|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ894278|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC034579|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##EU831603|HGD|3081|homogentisate 1,2-dioxygenase##EU831690|HGD|3081|homogentisate 1,2-dioxygenase##BC071757|HGD|3081|homogentisate 1,2-dioxygenase##Z75048|HGD|3081|homogentisate 1,2-dioxygenase##U63008|HGD|3081|homogentisate 1,2-dioxygenase##AK290782|HGD|3081|homogentisate 1,2-dioxygenase##BC020792|HGD|3081|homogentisate 1,2-dioxygenase##AF045167|HGD|3081|homogentisate 1,2-dioxygenase	0.999887	CTCF.p2:13:1.000
chr4	238376	238535	reg1015411.p1	9.040	+	TSC_hg19_v1_chr4_+_124389 AK096662 AL833758 BC104026 BC104028	-114081	+	TSC_hg19_v1_chr4_+_53214 AK300505 AK311343 BC036110 BC043151 AK301848 AK309855 AK056302 BC020836 BC009008 BX537887 NM_182524	-185231	+	None	None	None	AK302099 NM_001137608	51488	-	TSC_hg19_v1_chr4_+_331602 NM_003441	93140	+	TSC_hg19_v1_chr4_+_331608 BC036854 BC057244 L15309 BC074853	93215	+	AK096662|ZNF718|255403|zinc finger protein 718##AL833758|ZNF718|255403|zinc finger protein 718##BC104026|ZNF718|255403|zinc finger protein 718##BC104028|ZNF718|255403|zinc finger protein 718##AK300505|ZNF595|152687|zinc finger protein 595##BC036110|ZNF595|152687|zinc finger protein 595##BC043151|ZNF595|152687|zinc finger protein 595##AK301848|ZNF595|152687|zinc finger protein 595##AK309855|ZNF595|152687|zinc finger protein 595##AK056302|ZNF595|152687|zinc finger protein 595##BC020836|ZNF718|255403|zinc finger protein 718##BX537887|ZNF595|152687|zinc finger protein 595##NM_182524|ZNF595|152687|zinc finger protein 595##AK302099|ZNF732|654254|zinc finger protein 732##NM_001137608|ZNF732|654254|zinc finger protein 732##NM_003441|ZNF141|7700|zinc finger protein 141##BC036854|ZNF141|7700|zinc finger protein 141##BC057244|ZNF141|7700|zinc finger protein 141##L15309|ZNF141|7700|zinc finger protein 141##BC074853|ZNF141|7700|zinc finger protein 141	0.174746	
chr10	71876065	71876222	reg1015399.p1	9.039	+	TSC_hg19_v1_chr10_+_71812601 BC016172 AK022776 AK131057 AF151534 AF336304 AK022475	-63546	+	NM_018649	-63787	+	TSC_hg19_v1_chr10_+_71562275 M59217	-313852	+	TSC_hg19_v1_chr10_-_71892569 AK027403	16405	-	TSC_hg19_v1_chr10_-_71892601 BC023601 AF506757 NM_001198696 NM_032797	16499	-	TSC_hg19_v1_chr10_-_71905958 BC016840	29863	-	BC016172|H2AFY2|55506|H2A histone family, member Y2##AK022776|H2AFY2|55506|H2A histone family, member Y2##AK131057|H2AFY2|55506|H2A histone family, member Y2##AF151534|H2AFY2|55506|H2A histone family, member Y2##AF336304|H2AFY2|55506|H2A histone family, member Y2##AK022475|H2AFY2|55506|H2A histone family, member Y2##NM_018649|H2AFY2|55506|H2A histone family, member Y2##M59217|COL13A1|1305|collagen, type XIII, alpha 1##AK027403|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##BC023601|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##AF506757|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##NM_001198696|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##NM_032797|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##BC016840|TYSND1|219743|trypsin domain containing 1	1.030841	CTCF.p2:-2:0.999
chr18	43753406	43753528	reg1013363.p1	9.039	+	AY360137 NM_138443 AK097403 TSC_hg19_v1_chr18_+_43684350 BC014003 AK315605 BC005958 AB463535	-69130	+	NM_001001937	-69269	-	TSC_hg19_v1_chr18_-_43678288 AK310051 NM_004046	-75186	-	TSC_hg19_v1_chr18_+_43754002 NM_001008239 NM_145055 AK292981	527	+	TSC_hg19_v1_chr18_+_43754007 BC084579	548	+	TSC_hg19_v1_chr18_+_43754065 AK289738	615	+	AY360137|HAUS1|115106|HAUS augmin-like complex, subunit 1##NM_138443|HAUS1|115106|HAUS augmin-like complex, subunit 1##AK097403|HAUS1|115106|HAUS augmin-like complex, subunit 1##BC014003|HAUS1|115106|HAUS augmin-like complex, subunit 1##AK315605|HAUS1|115106|HAUS augmin-like complex, subunit 1##BC005958|HAUS1|115106|HAUS augmin-like complex, subunit 1##NM_001001937|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##AK310051|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##NM_004046|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##NM_001008239|C18orf25|147339|chromosome 18 open reading frame 25##NM_145055|C18orf25|147339|chromosome 18 open reading frame 25##AK292981|C18orf25|147339|chromosome 18 open reading frame 25##BC084579|C18orf25|147339|chromosome 18 open reading frame 25##AK289738|C18orf25|147339|chromosome 18 open reading frame 25	0.998283	CTCF.p2:1:0.998
chr22	29920569	29920673	reg1013964.p1	9.039	+	AK302660 NM_021076 TSC_hg19_v1_chr22_+_29876208 BC073969 AF203032	-44406	+	AJ010228 AJ010229 NM_021026	-86050	+	TSC_hg19_v1_chr22_-_29784570 BC046242 NM_001127 NM_001166019 NM_145730	-136029	-	NM_001002878 NM_001002879 BC003615 TSC_hg19_v1_chr22_-_29949699 AK025385 AB023200 AK225752 NM_001002877 NM_003678	29076	-	BC002371 BC006473 TSC_hg19_v1_chr22_-_29977083 AK290953 AK098367 AK298816 NM_001202502 AK314407	56474	-	AJ001258 NM_003634	56704	-	AK302660|NEFH|4744|neurofilament, heavy polypeptide##NM_021076|NEFH|4744|neurofilament, heavy polypeptide##BC073969|NEFH|4744|neurofilament, heavy polypeptide##AF203032|NEFH|4744|neurofilament, heavy polypeptide##AJ010228|RFPL1|5988|ret finger protein-like 1##AJ010229|RFPL1|5988|ret finger protein-like 1##NM_021026|RFPL1|5988|ret finger protein-like 1##BC046242|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_001127|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_001166019|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_145730|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_001002878|THOC5|8563|THO complex 5##NM_001002879|THOC5|8563|THO complex 5##BC003615|THOC5|8563|THO complex 5##AK025385|THOC5|8563|THO complex 5##AB023200|THOC5|8563|THO complex 5##AK225752|THOC5|8563|THO complex 5##NM_001002877|THOC5|8563|THO complex 5##NM_003678|THOC5|8563|THO complex 5##BC002371|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##BC006473|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AK290953|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AK098367|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AK298816|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##NM_001202502|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AK314407|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AJ001258|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##NM_003634|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)	0.816023	CTCF.p2:10:0.816
chr8	22446661	22446768	reg1013544.p2	9.039	+	AY007729 AY070438 NM_176871 NM_198042 TSC_hg19_v1_chr8_+_22437993 AY217349 AK024498 DQ893664 EU176702	-8664	+	TSC_hg19_v1_chr8_+_22436642 AK027800 BC071774 AF289563 BC021556	-10008	+	AK092968 AX747829 NM_021630	-10461	+	TSC_hg19_v1_chr8_+_22457113 AK295405 NM_001013842 NM_001198827 NM_173686	10406	+	TSC_hg19_v1_chr8_+_22462270 AK314535	15555	+	TSC_hg19_v1_chr8_+_22462275 BX640952	15562	+	AY007729|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AY070438|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_176871|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_198042|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AY217349|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK024498|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##DQ893664|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##EU176702|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK027800|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##BC071774|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AF289563|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##BC021556|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK092968|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_021630|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK295405|C8orf58|541565|chromosome 8 open reading frame 58##NM_001013842|C8orf58|541565|chromosome 8 open reading frame 58##NM_001198827|C8orf58|541565|chromosome 8 open reading frame 58##NM_173686|C8orf58|541565|chromosome 8 open reading frame 58##AK314535|KIAA1967|57805|KIAA1967##BX640952|KIAA1967|57805|KIAA1967	0.42049	CTCF.p2:0:0.420
chr19	28816372	28816490	reg1013160.p2	9.038	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-531503	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-531598	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-532043	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	887629	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	887690	-	NM_001146339	1201059	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.992916	CTCF.p2:9:0.993
chr4	75800123	75800222	reg1012394.p1	9.038	+	BC011618 S55606 AB109441 NM_001729	-80389	-	BC009799 M30704 NM_001657	-319544	+	BC009799 M30704 NM_001657	-489320	+	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	58200	+	TSC_hg19_v1_chr4_-_76439504 AK309555 AK308754 AB528599 AF247041 CU689096 CU690404 GQ129342 GQ129343 GQ250944 GQ250945 GQ250946 JF691538 JF691539 AB209072 AF255666 AY888047 GU937000 AF305424	639344	-	TSC_hg19_v1_chr4_-_76439614 AK091501 AX747022 BC031057 BC047393 NM_001008925 NM_001009922 NM_015436	639442	-	BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK309555|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK308754|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF247041|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129342|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129343|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250944|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250945|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250946|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AB209072|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF255666|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AY888047|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GU937000|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF305424|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK091501|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC031057|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC047393|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001008925|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001009922|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_015436|RCHY1|25898|ring finger and CHY zinc finger domain containing 1	0.999938	CTCF.p2:-6:1.000
chr7	152591618	152591714	reg1011930.p1	9.038	+	TSC_hg19_v1_chr7_+_152456872 NM_001040135 NM_020445 AK315534 BC008682 AK294292 AK316078 AF086920 BC015207 AF023453 CU677239 CU679037 DQ894754 EU176295	-134773	+	AB590731 CU692064 TSC_hg19_v1_chr7_-_152373227 BC042137 AK313607 Y08837 AF035587 NM_005431	-218458	-	TSC_hg19_v1_chr7_+_152161285 BC036622	-430427	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	992734	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	1158092	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	1410719	+	NM_001040135|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##NM_020445|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK315534|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC008682|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK294292|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK316078|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF086920|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC015207|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF023453|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##DQ894754|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##EU176295|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC042137|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AK313607|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##Y08837|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AF035587|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##NM_005431|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##BC036622|LOC100128822|100128822|uncharacterized LOC100128822##BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6	0.799682	CTCF.p2:-10:0.800
chr21	46213353	46213468	reg1014580.p1	9.037	+	BC115414 BC115415 AJ487962 NM_144991	-81933	-	AB076364 BC137339 BC137341 NM_198699	-96324	+	AB076363 BC127648 BC119713 BC120942 AJ566388 NM_181686	-111343	-	BT006914 AB590900 TSC_hg19_v1_chr21_-_46221720 AF032456 BC008351 BC054341 BC001738 AL355686 BC011569 AK290629 NM_001202489 NM_003343 NM_182688	8306	-	BT007008 CR542173 CR542188 CU674002 AB528029 TSC_hg19_v1_chr21_-_46237965	24513	-	TSC_hg19_v1_chr21_-_46237967 BC000036 X99584	24558	-	BC115414|TSPEAR|54084|thrombospondin-type laminin G domain and EAR repeats##BC115415|TSPEAR|54084|thrombospondin-type laminin G domain and EAR repeats##AJ487962|TSPEAR|54084|thrombospondin-type laminin G domain and EAR repeats##NM_144991|TSPEAR|54084|thrombospondin-type laminin G domain and EAR repeats##AB076364|KRTAP10-12|386685|keratin associated protein 10-12##BC137339|KRTAP10-12|386685|keratin associated protein 10-12##BC137341|KRTAP10-12|386685|keratin associated protein 10-12##NM_198699|KRTAP10-12|386685|keratin associated protein 10-12##AB076363|KRTAP12-1|353332|keratin associated protein 12-1##BC127648|KRTAP12-1|353332|keratin associated protein 12-1##BC119713|KRTAP12-1|353332|keratin associated protein 12-1##BC120942|KRTAP12-1|353332|keratin associated protein 12-1##AJ566388|KRTAP12-1|353332|keratin associated protein 12-1##NM_181686|KRTAP12-1|353332|keratin associated protein 12-1##BT006914|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##AF032456|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BC008351|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BC054341|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BC001738|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BC011569|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##AK290629|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##NM_001202489|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##NM_003343|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##NM_182688|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BT007008|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##CR542173|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##CR542188|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##BC000036|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##X99584|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)	0.952573	CTCF.p2:7:0.953
chr8	144065907	144066051	reg1013793.p2	9.036	+	AB463555 NM_000498 X54741	-66723	-	X55764 AF478474 BC096285 BC096286 BC096287 NM_000497 NM_001026213	-104746	-	D84290 NM_002066 BC126336 BC126338	-149758	+	TSC_hg19_v1_chr8_+_144099945 NM_001127213 NM_002346 AK223074 AK129615 AK311983 BC003392 U42376 Z68179	33963	+	TSC_hg19_v1_chr8_+_144102304 BC119708 BC119709 AB529045 U56145	36348	+	TSC_hg19_v1_chr8_+_144120683 BC073830 AK094450 NM_173687 BC120993 BC063497	54696	+	NM_000498|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##X54741|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##X55764|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##AF478474|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096285|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096286|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096287|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_000497|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_001026213|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##D84290|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##NM_002066|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126336|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126338|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##NM_001127213|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002346|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK223074|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK129615|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK311983|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC003392|LY6E|4061|lymphocyte antigen 6 complex, locus E##U42376|LY6E|4061|lymphocyte antigen 6 complex, locus E##Z68179|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119708|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119709|LY6E|4061|lymphocyte antigen 6 complex, locus E##U56145|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC073830|C8orf31|286122|chromosome 8 open reading frame 31##AK094450|C8orf31|286122|chromosome 8 open reading frame 31##NM_173687|C8orf31|286122|chromosome 8 open reading frame 31##BC120993|C8orf31|286122|chromosome 8 open reading frame 31##BC063497|C8orf31|286122|chromosome 8 open reading frame 31	0.229706	CTCF.p2:13:0.230
chr10	6193484	6193612	reg1013326.p2	9.035	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-6636	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-6664	+	AK302518 TSC_hg19_v1_chr10_+_6186860 NM_001145443	-6732	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	51328	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	428713	-	TSC_hg19_v1_chr10_+_6622460 AY007155	428932	+	AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##NM_001145443|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949	0.452832	CTCF.p2:10:0.453
chr13	80938171	80938285	reg1014228.p2	9.035	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-23164	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-25186	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-882673	+	TSC_hg19_v1_chr13_-_84456424 BC051738	3518197	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	3518272	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	5435211	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.799389	CTCF.p2:4:0.799
chr14	31979433	31979613	reg1012410.p1	9.035	+	GQ981321 GQ981322 NM_001197184	-22373	-	TSC_hg19_v1_chr14_-_31926633 BC010618 AK302829 AK055367 NM_080664	-52848	-	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	-89762	-	TSC_hg19_v1_chr14_+_32030642 NM_025152 AK316445 BX248028 AK295326 BC024919 AK022722 CU692938	51134	+	AK301447 NM_001201573	67598	+	AK093789 NM_001201574	204251	+	GQ981321|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##GQ981322|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##NM_001197184|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##BC010618|C14orf126|112487|chromosome 14 open reading frame 126##AK055367|C14orf126|112487|chromosome 14 open reading frame 126##NM_080664|C14orf126|112487|chromosome 14 open reading frame 126##BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A##NM_025152|NUBPL|80224|nucleotide binding protein-like##AK316445|NUBPL|80224|nucleotide binding protein-like##BX248028|NUBPL|80224|nucleotide binding protein-like##AK295326|NUBPL|80224|nucleotide binding protein-like##BC024919|NUBPL|80224|nucleotide binding protein-like##AK022722|NUBPL|80224|nucleotide binding protein-like##AK301447|NUBPL|80224|nucleotide binding protein-like##NM_001201573|NUBPL|80224|nucleotide binding protein-like##AK093789|NUBPL|80224|nucleotide binding protein-like##NM_001201574|NUBPL|80224|nucleotide binding protein-like	0.949102	CTCF.p2:12:0.949
chrX	130897876	130898029	reg1013249.p1	9.034	+	BC137050 AB529233 NM_001004486	-219954	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-474540	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-474690	-	TSC_hg19_v1_chrX_-_130964633 AK097911	66699	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	259369	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	259688	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.0	
chr10	90447741	90447883	reg1017440.p1	9.033	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	-23632	+	BC042900 BC031219 NM_001010939	-101299	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	-104798	-	AB528790 EF426482 NM_001080518	36488	+	EF426483 NM_001102469	73350	+	EF426484 NM_001128215	114674	+	NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase##EF426482|LIPK|643414|lipase, family member K##NM_001080518|LIPK|643414|lipase, family member K##EF426483|LIPN|643418|lipase, family member N##NM_001102469|LIPN|643418|lipase, family member N##EF426484|LIPM|340654|lipase, family member M##NM_001128215|LIPM|340654|lipase, family member M	0.984385	CTCF.p2:-1:0.984
chr13	80253547	80253656	reg1013255.p1	9.032	+	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-198046	+	TSC_hg19_v1_chr13_+_80055411 AK297197 AK001723	-198179	+	TSC_hg19_v1_chr13_+_80055257 NM_001161407 NM_019080 AB097019 AB097028 AB097029	-198330	+	BC004205 TSC_hg19_v1_chr13_-_80913114	659441	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	661463	-	TSC_hg19_v1_chr13_-_84456424 BC051738	4202824	-	AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##AK297197|NDFIP2|54602|Nedd4 family interacting protein 2##AK001723|NDFIP2|54602|Nedd4 family interacting protein 2##NM_001161407|NDFIP2|54602|Nedd4 family interacting protein 2##NM_019080|NDFIP2|54602|Nedd4 family interacting protein 2##AB097019|NDFIP2|54602|Nedd4 family interacting protein 2##AB097028|NDFIP2|54602|Nedd4 family interacting protein 2##AB097029|NDFIP2|54602|Nedd4 family interacting protein 2##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1	0.998674	CTCF.p2:-7:0.999
chr14	31125496	31125628	reg1016840.p1	9.031	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	-34018	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	-34038	+	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	-97202	+	TSC_hg19_v1_chr14_+_31343764 NM_001135058 NM_004086 AY358900 AF006740 AK292724 BC000640 BC007230 BC018827	218156	+	NM_001128126 NM_007077	369120	+	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	370008	-	AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##NM_001135058|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_004086|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AY358900|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AF006740|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AK292724|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC000640|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC007230|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC018827|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_001128126|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##NM_007077|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3	0.944522	CTCF.p2:5:0.945
chr21	34978208	34978327	reg1013430.p1	9.031	+	TSC_hg19_v1_chr21_-_34960983 AK074964 BC048266 NM_017613	-17241	-	TSC_hg19_v1_chr21_+_34922923 BC002422	-55297	+	TSC_hg19_v1_chr21_+_34915378 AK024752 BC005337 AF161428 AF380179 AF380180 AF380181 AF380183 AF380184 AF161430 AB028942 BC046101 BC066303 AF435977 BC054029	-62890	+	BC033023 AK315707 AF029689 AF098798 BC022827 BC013155 TSC_hg19_v1_chr21_-_35014048 BX647276 BX648547 AK001293 NM_145858	35819	-	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	36588	+	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	212403	+	AK074964|DONSON|29980|downstream neighbor of SON##BC048266|DONSON|29980|downstream neighbor of SON##NM_017613|DONSON|29980|downstream neighbor of SON##BC002422|SON|6651|SON DNA binding protein##AK024752|SON|6651|SON DNA binding protein##BC005337|SON|6651|SON DNA binding protein##AF161428|SON|6651|SON DNA binding protein##AF380179|SON|6651|SON DNA binding protein##AF380180|SON|6651|SON DNA binding protein##AF380181|SON|6651|SON DNA binding protein##AF380183|SON|6651|SON DNA binding protein##AF380184|SON|6651|SON DNA binding protein##AF161430|SON|6651|SON DNA binding protein##AB028942|SON|6651|SON DNA binding protein##BC046101|SON|6651|SON DNA binding protein##BC066303|SON|6651|SON DNA binding protein##AF435977|SON|6651|SON DNA binding protein##BC054029|SON|6651|SON DNA binding protein##BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)	0.99921	CTCF.p2:11:0.999
chr7	44388081	44388194	reg1012386.p1	9.031	+	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	-22846	-	TSC_hg19_v1_chr7_+_44240639 BC007319 AF091079 U95735 DQ890653 DQ893833 CU675611 AB451317 AB451447 BT007078 CR456989 CR542008	-147451	+	TSC_hg19_v1_chr7_+_44240631 AK223488	-147517	+	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	142144	-	AY437865 AY515256 FJ481111 TSC_hg19_v1_chr7_-_44580901 BC117178 BC143731 BC143756 AF192522 AF192523 NM_001101648 NM_013389	192748	-	TSC_hg19_v1_chr7_-_44613508 CR457213 DQ891215 DQ894398 AB385026 AL136700 AK022774 AK309276 BC001235 AK222662 AK315363 AF247666 AJ131712	225394	-	AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC007319|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AF091079|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##U95735|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ890653|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ893833|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451317|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451447|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BT007078|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR456989|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR542008|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK223488|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3##AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##CR457213|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##DQ891215|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##DQ894398|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AL136700|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK022774|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK309276|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##BC001235|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK222662|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK315363|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AF247666|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AJ131712|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56	0.33389	CTCF.p2:18:0.334
chr8	59425908	59426030	reg1015566.p1	9.031	+	X56088 M93133 BC101777 BC112184 NM_000780	-13262	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	-102084	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-518812	+	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	39783	+	BC113674 BC113676 BC143915 BC143916 TSC_hg19_v1_chr8_+_59465795 AK300647	39820	+	TSC_hg19_v1_chr8_+_59465816 AF006636 AK295198 AK128645	39838	+	X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)##BC113674|SDCBP|6386|syndecan binding protein (syntenin)##BC113676|SDCBP|6386|syndecan binding protein (syntenin)##BC143915|SDCBP|6386|syndecan binding protein (syntenin)##BC143916|SDCBP|6386|syndecan binding protein (syntenin)##AK300647|SDCBP|6386|syndecan binding protein (syntenin)##AF006636|SDCBP|6386|syndecan binding protein (syntenin)##AK295198|SDCBP|6386|syndecan binding protein (syntenin)##AK128645|SDCBP|6386|syndecan binding protein (syntenin)	0.980115	CTCF.p2:-8:0.980
chr19	155283	155417	reg1016880.p1	9.030	+	AY972818 AY972819 BC136848 BC136867 BC136907 BC136908 NM_001005240	-44699	+	TSC_hg19_v1_chr19_-_70955 AK308635	-84391	-	None	None	None	NM_177543	135818	-	BT007021 CU678210 AF035959 AF047760 AF056083 BC002806 TSC_hg19_v1_chr19_-_291402 NM_003712 NM_177526	136034	-	TSC_hg19_v1_chr19_-_344795 BC028203 NM_017550	189437	-	AY972818|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AY972819|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136848|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136867|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136907|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136908|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##NM_001005240|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AK308635|WASH5P|375690|WAS protein family homolog 5 pseudogene##NM_177543|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BT007021|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF035959|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF047760|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF056083|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BC002806|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_003712|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_177526|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BC028203|MIER2|54531|mesoderm induction early response 1, family member 2##NM_017550|MIER2|54531|mesoderm induction early response 1, family member 2	0.996754	CTCF.p2:-11:0.997
chr3	27700797	27700911	reg1013905.p1	9.029	+	TSC_hg19_v1_chr3_-_27525893 AK309734	-174924	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	-175029	-	AF047033 AF089726 NM_003615	-202610	-	AB031038 BC131712 NM_005442 AB463608 BC037568	62939	-	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	63347	-	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	582244	+	AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)	0.99484	CTCF.p2:5:0.995
chr4	27686264	27686393	reg1013707.p1	9.029	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-823788	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-1100648	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-1194343	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3035671	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3035866	+	TSC_hg19_v1_chr4_+_30722465 AB006756	3036131	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.182464	
chr6	3411260	3411406	reg1014575.p1	9.029	+	TSC_hg19_v1_chr6_-_3272352 BC090851 BC022217	-138903	-	TSC_hg19_v1_chr6_+_3259232 AK126623 AK095683	-152094	+	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	-152175	+	BC128580 BC128581 BC038748 NM_021945	33874	-	TSC_hg19_v1_chr6_-_3456513 AL110245	45181	-	BC040876 NM_015482	45430	-	BC090851|SLC22A23|63027|solute carrier family 22, member 23##BC022217|SLC22A23|63027|solute carrier family 22, member 23##AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##BC128580|SLC22A23|63027|solute carrier family 22, member 23##BC128581|SLC22A23|63027|solute carrier family 22, member 23##BC038748|SLC22A23|63027|solute carrier family 22, member 23##NM_021945|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23	1.688238	CTCF.p2:-14:0.998	CTCF.p2:23:0.690
chrX	130947292	130947441	reg1013028.p2	9.029	+	BC137050 AB529233 NM_001004486	-269368	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-523954	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-524104	-	TSC_hg19_v1_chrX_-_130964633 AK097911	17285	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	209955	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	210274	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.010506	
chr1	110572342	110572451	reg1013191.p1	9.028	+	TSC_hg19_v1_chr1_+_110560111 BC003631	-12269	+	NM_001242675 NM_001242676	-25827	+	NM_001242674	-28848	+	TSC_hg19_v1_chr1_+_110577229 BC119814 BC121793 NM_033088	4833	+	BC094786 TSC_hg19_v1_chr1_+_110577243	4846	+	AK291059 TSC_hg19_v1_chr1_+_110577249 AL834196 AB051548 AB463038	4857	+	BC003631|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_001242675|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_001242676|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_001242674|AHCYL1|10768|adenosylhomocysteinase-like 1##BC119814|FAM40A|85369|family with sequence similarity 40, member A##BC121793|FAM40A|85369|family with sequence similarity 40, member A##NM_033088|FAM40A|85369|family with sequence similarity 40, member A##BC094786|FAM40A|85369|family with sequence similarity 40, member A##AK291059|FAM40A|85369|family with sequence similarity 40, member A##AL834196|FAM40A|85369|family with sequence similarity 40, member A##AB051548|FAM40A|85369|family with sequence similarity 40, member A	0.943408	CTCF.p2:-14:0.943
chr7	7801011	7801163	reg1014017.p1	9.028	+	BC009868 NM_002947	-42850	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-120714	+	BT007320 AB464142 TSC_hg19_v1_chr7_-_7680067 L07493 BC005264 AK311842	-121000	-	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	207346	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	500629	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	500704	-	BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##BT007320|RPA3|6119|replication protein A3, 14kDa##L07493|RPA3|6119|replication protein A3, 14kDa##BC005264|RPA3|6119|replication protein A3, 14kDa##AK311842|RPA3|6119|replication protein A3, 14kDa##NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa	1.009885	CTCF.p2:5:0.999
chr8	23145481	23145634	reg1014003.p2	9.028	+	TSC_hg19_v1_chr8_+_23104153 AK092500 AX747573 AL833843 BC019110 AK296592 CU676386 BC004344	-41315	+	TSC_hg19_v1_chr8_+_23104147 AK315664 AK021776	-41422	+	AK097202 NM_152272 BC042050	-44399	+	TSC_hg19_v1_chr8_+_23145620 NM_001136108 AK293465	40	+	TSC_hg19_v1_chr8_+_23145630 AL050297 BC032421	121	+	AK098436 TSC_hg19_v1_chr8_-_23177535	31951	-	AK092500|CHMP7|91782|charged multivesicular body protein 7##AL833843|CHMP7|91782|charged multivesicular body protein 7##BC019110|CHMP7|91782|charged multivesicular body protein 7##AK296592|CHMP7|91782|charged multivesicular body protein 7##BC004344|CHMP7|91782|charged multivesicular body protein 7##AK315664|CHMP7|91782|charged multivesicular body protein 7##AK021776|CHMP7|91782|charged multivesicular body protein 7##AK097202|CHMP7|91782|charged multivesicular body protein 7##NM_152272|CHMP7|91782|charged multivesicular body protein 7##BC042050|CHMP7|91782|charged multivesicular body protein 7##NM_001136108|R3HCC1|203069|R3H domain and coiled-coil containing 1##AK293465|R3HCC1|203069|R3H domain and coiled-coil containing 1##AL050297|R3HCC1|203069|R3H domain and coiled-coil containing 1##BC032421|R3HCC1|203069|R3H domain and coiled-coil containing 1##AK098436|LOXL2|4017|lysyl oxidase-like 2	0.0	
chrX	62907109	62907252	reg1016307.p1	9.028	+	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	-126313	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	-258913	-	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	-335981	-	BC117406 TSC_hg19_v1_chrX_-_62974440 AK289993	67213	-	BC056892 BC046138 TSC_hg19_v1_chrX_-_62974959 AK295178	67778	-	BC018106 BC043497 BC035290 AB007884 TSC_hg19_v1_chrX_-_62975004	67815	-	AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC117406|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9##AK289993|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9##BC056892|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9##BC046138|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9##AK295178|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9##BC018106|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9##BC043497|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9##AB007884|ARHGEF9|23229|Cdc42 guanine nucleotide exchange factor (GEF) 9	0.985349	CTCF.p2:10:0.985
chr13	42227043	42227157	reg1013313.p2	9.027	+	TSC_hg19_v1_chr13_+_42031690 BC038706 AF036549	-195400	+	TSC_hg19_v1_chr13_+_42031685 BC066334	-195417	+	TSC_hg19_v1_chr13_+_42031539 NM_014059	-195549	+	TSC_hg19_v1_chr13_-_42535066 AK095155	307980	-	TSC_hg19_v1_chr13_-_42535247 AB590583 BC131802 BC053674 NM_001009814 NM_015058	308089	-	AK289546 NM_001204504	387071	+	BC038706|C13orf15|28984|chromosome 13 open reading frame 15##AF036549|C13orf15|28984|chromosome 13 open reading frame 15##BC066334|C13orf15|28984|chromosome 13 open reading frame 15##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15##AK095155|KIAA0564|23078|KIAA0564##BC131802|KIAA0564|23078|KIAA0564##BC053674|KIAA0564|23078|KIAA0564##NM_001009814|KIAA0564|23078|KIAA0564##NM_015058|KIAA0564|23078|KIAA0564##AK289546|DGKH|160851|diacylglycerol kinase, eta##NM_001204504|DGKH|160851|diacylglycerol kinase, eta	0.083845	
chr19	14542808	14542946	reg1016760.p1	9.027	+	TSC_hg19_v1_chr19_-_14530193 U90426 NM_005804	-12703	-	TSC_hg19_v1_chr19_-_14530152 BC001009 BC032128 BC010455 AK293911	-12737	-	TSC_hg19_v1_chr19_-_14529877 AK301847	-12988	-	TSC_hg19_v1_chr19_+_14544161 BC094766 NM_002741 BC040061	1278	+	TSC_hg19_v1_chr19_+_14544325 S75546 U33053 AK313886 DQ892477	1431	+	TSC_hg19_v1_chr19_+_14551079 AK123007	8188	+	U90426|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##NM_005804|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##BC001009|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##BC032128|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##BC010455|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##AK293911|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##AK301847|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##BC094766|PKN1|5585|protein kinase N1##NM_002741|PKN1|5585|protein kinase N1##BC040061|PKN1|5585|protein kinase N1##S75546|PKN1|5585|protein kinase N1##U33053|PKN1|5585|protein kinase N1##AK313886|PKN1|5585|protein kinase N1##DQ892477|PKN1|5585|protein kinase N1##AK123007|PKN1|5585|protein kinase N1	0.263591	CTCF.p2:8:0.246
chr4	15164448	15164561	reg1013126.p1	9.027	+	TSC_hg19_v1_chr4_+_15005451 AY247744 AY255519 BC103939 BC103940 BC103941 BC103942 BC105925	-159043	+	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	-160207	+	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	-160509	-	BX647781 NM_001135170 AK314802 BC022187 BC024015	177081	+	NM_001135171	211670	+	NM_031911 AF329839	265143	+	AY247744|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##AY255519|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103939|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103940|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103941|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103942|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC105925|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135171|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	0.699187	CTCF.p2:13:0.699
chr3	125461852	125461982	reg1013036.p2	9.026	+	TSC_hg19_v1_chr3_-_125314371 NM_022776	-147544	-	TSC_hg19_v1_chr3_-_125239050 NM_003794	-222864	-	AF065485 TSC_hg19_v1_chr3_-_125239047 CU676320 DQ892131 DQ895325 AB528425 AK001835 AK298972 BC018762 BC021002	-222886	-	TSC_hg19_v1_chr3_+_125635451 BC032772 BC041080	173539	+	BC073816 NM_001015050 NM_001195223	193966	-	AF231410 NM_001012337 BC141849 AK302014	226137	+	NM_022776|OSBPL11|114885|oxysterol binding protein-like 11##NM_003794|SNX4|8723|sorting nexin 4##AF065485|SNX4|8723|sorting nexin 4##DQ892131|SNX4|8723|sorting nexin 4##DQ895325|SNX4|8723|sorting nexin 4##AK001835|SNX4|8723|sorting nexin 4##AK298972|SNX4|8723|sorting nexin 4##BC018762|SNX4|8723|sorting nexin 4##BC032772|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC041080|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like##AF231410|ROPN1B|152015|rhophilin associated tail protein 1B##NM_001012337|ROPN1B|152015|rhophilin associated tail protein 1B##BC141849|ROPN1B|152015|rhophilin associated tail protein 1B	1.631974	CTCF.p2:25:0.892
chr14	65227035	65227133	reg1011510.p1	9.025	+	TSC_hg19_v1_chr14_+_65171243 BC129952 BC129953	-55806	+	TSC_hg19_v1_chr14_+_65171178 BX248779 NM_015549	-55912	+	TSC_hg19_v1_chr14_+_65016678 AK058044 NM_172365 BC068989	-210439	+	AB384944 BC136284 BC136285 NM_000347 NM_001024858	62754	-	J05500 AB209415 TSC_hg19_v1_chr14_-_65346722	119559	-	NM_001202558 NM_001202559 NM_001204063 NM_001204064 NM_145165 BC020550 TSC_hg19_v1_chr14_+_65381175 AK315905 AF060510 AK057626	154043	+	BC129952|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BC129953|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BX248779|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##NM_015549|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##AK058044|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##NM_172365|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##BC068989|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##BC136284|SPTB|6710|spectrin, beta, erythrocytic##BC136285|SPTB|6710|spectrin, beta, erythrocytic##NM_000347|SPTB|6710|spectrin, beta, erythrocytic##NM_001024858|SPTB|6710|spectrin, beta, erythrocytic##J05500|SPTB|6710|spectrin, beta, erythrocytic##AB209415|SPTB|6710|spectrin, beta, erythrocytic##NM_001202558|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##NM_001202559|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##NM_001204063|CHURC1|91612|churchill domain containing 1##NM_001204064|CHURC1|91612|churchill domain containing 1##NM_145165|CHURC1|91612|churchill domain containing 1##BC020550|CHURC1|91612|churchill domain containing 1##AK315905|CHURC1|91612|churchill domain containing 1##AF060510|CHURC1|91612|churchill domain containing 1##AK057626|CHURC1|91612|churchill domain containing 1	0.993437	CTCF.p2:-4:0.993
chr17	65959517	65959630	reg1013090.p1	9.025	+	TSC_hg19_v1_chr17_+_65936590 AK027184	-22939	+	AK022570 TSC_hg19_v1_chr17_+_65916176	-43404	+	TSC_hg19_v1_chr17_+_65908058 AK025776	-51496	+	BC105124 BC112073 BC036760 TSC_hg19_v1_chr17_-_65989703 AK026583 NM_181655 NM_181656	30100	-	TSC_hg19_v1_chr17_+_66031850 NM_002266 U09559 U28386 AK024833 AK058111 AK291954 BC005978 BC013257 BC053343 BC146905	72267	+	TSC_hg19_v1_chr17_+_66031889 BC034443	72315	+	AK027184|BPTF|2186|bromodomain PHD finger transcription factor##AK022570|BPTF|2186|bromodomain PHD finger transcription factor##AK025776|BPTF|2186|bromodomain PHD finger transcription factor##BC105124|C17orf58|284018|chromosome 17 open reading frame 58##BC112073|C17orf58|284018|chromosome 17 open reading frame 58##BC036760|C17orf58|284018|chromosome 17 open reading frame 58##AK026583|C17orf58|284018|chromosome 17 open reading frame 58##NM_181655|C17orf58|284018|chromosome 17 open reading frame 58##NM_181656|C17orf58|284018|chromosome 17 open reading frame 58##NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)	0.935888	CTCF.p2:-6:0.936
chr18	58081531	58081646	reg1013683.p2	9.025	+	AK314130 NM_005912	-41588	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-514359	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-716938	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1076186	+	AK096495 NM_173557	1478715	-	AF109219 TSC_hg19_v1_chr18_-_59854208	1772606	-	AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.169954	
chr18	60692525	60692636	reg1013467.p2	9.025	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-308272	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-308654	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	-309916	+	TSC_hg19_v1_chr18_-_60795898 AF401211	103355	-	BC027258 NM_000633 NM_000657	293980	-	TSC_hg19_v1_chr18_-_60986977 X06487	294413	-	BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr20	32610035	32610160	reg1014261.p1	9.025	+	AK291079 TSC_hg19_v1_chr20_+_32581883 AK291054	-28214	+	TSC_hg19_v1_chr20_+_32581743 AF148457 AK222915 L38696 BC105018	-28302	+	TSC_hg19_v1_chr20_+_32581716 BC103753 AK299766	-28393	+	AB451237 AB451362 BT009795 CR456734 CU674464 AB590122 TSC_hg19_v1_chr20_-_32700021 AB208966 M29536 BC107588 BC000934 AK313025 BC000461	89899	-	TSC_hg19_v1_chr20_-_32700082 NM_003908	89988	-	NM_001672 BC104238 BC104239	238077	+	AK291079|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK291054|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AF148457|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK222915|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##L38696|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC105018|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC103753|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK299766|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AB451237|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB451362|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BT009795|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##CR456734|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB208966|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##M29536|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC107588|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000934|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AK313025|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000461|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##NM_003908|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##NM_001672|ASIP|434|agouti signaling protein##BC104238|ASIP|434|agouti signaling protein##BC104239|ASIP|434|agouti signaling protein	0.8812	CTCF.p2:6:0.881
chr2	79206881	79206999	reg1013886.p1	9.025	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	-1457522	-	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-3268889	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-3269221	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	45898	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	108193	-	AK307292 NM_002909 TSC_hg19_v1_chr2_+_79347583	140596	+	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta##AK307292|REG1A|5967|regenerating islet-derived 1 alpha##NM_002909|REG1A|5967|regenerating islet-derived 1 alpha	0.999108	CTCF.p2:16:0.999
chr9	139898847	139898966	reg1014726.p2	9.025	+	AF102166 TSC_hg19_v1_chr9_-_139891017 BC007012 NM_004669	-7903	-	TSC_hg19_v1_chr9_+_139886873 BC002613 NM_183241 CU678068 BC038191	-12014	+	AK127160 NM_207510	-21462	+	BC008755 TSC_hg19_v1_chr9_-_139907635	8723	-	AK124899 NM_207511	23009	+	AB384556 AF327657 BC029282 BC064542 BC090860 TSC_hg19_v1_chr9_-_139922684 AK308738 AF178941	23733	-	AF102166|CLIC3|9022|chloride intracellular channel 3##BC007012|CLIC3|9022|chloride intracellular channel 3##NM_004669|CLIC3|9022|chloride intracellular channel 3##BC002613|C9orf142|286257|chromosome 9 open reading frame 142##NM_183241|C9orf142|286257|chromosome 9 open reading frame 142##BC038191|C9orf142|286257|chromosome 9 open reading frame 142##AK127160|LCNL1|401562|lipocalin-like 1##NM_207510|LCNL1|401562|lipocalin-like 1##BC008755|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##AK124899|C9orf139|401563|chromosome 9 open reading frame 139##NM_207511|C9orf139|401563|chromosome 9 open reading frame 139##AF327657|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC029282|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC064542|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC090860|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##AK308738|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##AF178941|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2	0.830069	CTCF.p2:-2:0.830
chr7	143589848	143589996	reg1015193.p2	9.024	+	AK299911 TSC_hg19_v1_chr7_-_143582416 NM_001206941	-7508	-	BC110410 BC043153 NM_178561	-135116	-	NM_001130026 AK296318	-176972	+	TSC_hg19_v1_chr7_-_143599249 AB018281 NM_014719 BC000609 AK291605 AK001640 NM_001206938	9343	-	BC136812 BC136813 NM_001004685	42369	+	BC104975 NM_012369	67097	+	AK299911|FAM115A|9747|family with sequence similarity 115, member A##NM_001206941|FAM115A|9747|family with sequence similarity 115, member A##BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_178561|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_001130026|FAM115C|285966|family with sequence similarity 115, member C##AK296318|FAM115C|285966|family with sequence similarity 115, member C##AB018281|FAM115A|9747|family with sequence similarity 115, member A##NM_014719|FAM115A|9747|family with sequence similarity 115, member A##BC000609|FAM115A|9747|family with sequence similarity 115, member A##AK291605|FAM115A|9747|family with sequence similarity 115, member A##AK001640|FAM115A|9747|family with sequence similarity 115, member A##NM_001206938|FAM115A|9747|family with sequence similarity 115, member A##BC136812|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##BC136813|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##NM_001004685|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##BC104975|OR2F1|26211|olfactory receptor, family 2, subfamily F, member 1##NM_012369|OR2F1|26211|olfactory receptor, family 2, subfamily F, member 1	0.276165	CTCF.p2:-5:0.276
chr1	207038386	207038516	reg1014304.p1	9.023	+	AF453946 NM_013371	-36230	+	AY040367 NM_153758 AB463800	-66225	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-92572	-	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	724	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	32349	+	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	56836	-	AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24##BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3	0.985649	CTCF.p2:3:0.986
chr14	62646256	62646349	reg1011820.p1	9.023	+	TSC_hg19_v1_chr14_+_62584125 BX248751	-62144	+	AJ617628 NM_031914 BC117363 BC143598 HQ258344 AB102949	-183664	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	-417183	+	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	865627	-	AK074484 NM_172376	922281	-	NM_020663 AF087862 AK027351 AK027278 BC062575 AB209218 AF309563	1024879	+	BX248751|FLJ43390|646113|uncharacterized LOC646113##AJ617628|SYT16|83851|synaptotagmin XVI##NM_031914|SYT16|83851|synaptotagmin XVI##BC117363|SYT16|83851|synaptotagmin XVI##BC143598|SYT16|83851|synaptotagmin XVI##HQ258344|SYT16|83851|synaptotagmin XVI##AB102949|SYT16|83851|synaptotagmin XVI##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AK074484|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172376|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_020663|RHOJ|57381|ras homolog gene family, member J##AF087862|RHOJ|57381|ras homolog gene family, member J##AK027351|RHOJ|57381|ras homolog gene family, member J##AK027278|RHOJ|57381|ras homolog gene family, member J##BC062575|RHOJ|57381|ras homolog gene family, member J##AB209218|RHOJ|57381|ras homolog gene family, member J##AF309563|RHOJ|57381|ras homolog gene family, member J	0.977323	CTCF.p2:-9:0.977
chr6_mcf_hap5	4319556	4319680	reg1012978.p1	9.023	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.982461	CTCF.p2:-32:0.982
chr13	89719236	89719365	reg1016614.p1	9.022	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-1394431	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-3345861	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-5262800	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	2331604	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	4160127	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	5412526	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.163366	
chr20	5510403	5510530	reg1007765.p3	9.022	+	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-215430	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-402771	+	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	-402944	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	81121	-	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	220600	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	381660	+	AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)	0.771405	CTCF.p2:6:0.771
chr5	79642024	79642115	reg1014227.p1	9.022	+	NM_032567 AK098575 AK314007 AF333098 BC033798	-26254	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	-90184	-	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-310905	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	61784	+	AY358256 NM_205548 BC142990 TSC_hg19_v1_chr5_+_79783828 BC131563	141764	+	TSC_hg19_v1_chr5_+_79796130 AB055763	154060	+	NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AY358256|FAM151B|167555|family with sequence similarity 151, member B##NM_205548|FAM151B|167555|family with sequence similarity 151, member B##BC142990|FAM151B|167555|family with sequence similarity 151, member B##BC131563|FAM151B|167555|family with sequence similarity 151, member B	0.942234	CTCF.p2:-2:0.808
chr17	27475995	27476121	reg1013274.p1	9.021	+	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	-8647	-	AK054958 NM_004740	-73432	-	TSC_hg19_v1_chr17_-_27401793 BC131561 BC047669	-74200	-	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	31292	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	97819	+	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	145052	-	AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC131561|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC047669|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2	1.008926	CTCF.p2:-7:0.990
chr3	65658701	65658811	reg1013800.p2	9.021	+	TSC_hg19_v1_chr3_-_64673677 BC036770 AK310571	-985070	-	TSC_hg19_v1_chr3_-_64673334 AF261918 BC130578 BC171764 AF488803 NM_182920	-985409	-	AB037733 TSC_hg19_v1_chr3_-_64672299	-986461	-	BC062367 NM_001033057 NM_004742 NM_015520 TSC_hg19_v1_chr3_-_66024518	365757	-	AK092495 AX747571 NM_173471	460528	+	NM_001164796	612411	+	BC036770|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AK310571|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##NM_001164796|SLC25A26|115286|solute carrier family 25, member 26	0.574783	CTCF.p2:-10:0.575
chr7	141676162	141676296	reg1014722.p2	9.021	+	BC104933 BC104937 NM_176817	-2657	-	AF139768 BC113098 BC113099 AK295200 TSC_hg19_v1_chr7_-_141646760 AK313703 AK292766 AJ271684 NM_013252 AK307095	-29468	-	BC136819 BC136821 NM_001001656	-57584	+	AF016833 NM_004668 BC120872	19463	+	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	135310	+	AY358487 BC035384 AK122940 NM_001001317	281632	-	BC104933|TAS2R38|5726|taste receptor, type 2, member 38##BC104937|TAS2R38|5726|taste receptor, type 2, member 38##NM_176817|TAS2R38|5726|taste receptor, type 2, member 38##AF139768|CLEC5A|23601|C-type lectin domain family 5, member A##BC113098|CLEC5A|23601|C-type lectin domain family 5, member A##BC113099|CLEC5A|23601|C-type lectin domain family 5, member A##AK295200|CLEC5A|23601|C-type lectin domain family 5, member A##AK313703|CLEC5A|23601|C-type lectin domain family 5, member A##AK292766|CLEC5A|23601|C-type lectin domain family 5, member A##AJ271684|CLEC5A|23601|C-type lectin domain family 5, member A##NM_013252|CLEC5A|23601|C-type lectin domain family 5, member A##AK307095|CLEC5A|23601|C-type lectin domain family 5, member A##BC136819|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4##BC136821|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4##NM_001001656|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58	0.999066	CTCF.p2:-5:0.999
chr10	94875676	94875767	reg1014571.p2	9.020	+	AK075374 NM_000783 AF005418	-42065	+	AK027560 NM_057157	-42490	+	AY356349 NM_183374	-54701	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	366327	-	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	380667	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	450788	+	AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1	0.995417	CTCF.p2:30:0.995
chr14	20774105	20774249	reg1014441.p2	9.020	+	TSC_hg19_v1_chr14_-_20774154 AK074553 NM_138376	-36	-	BX248066 BC008647 EU832467 TSC_hg19_v1_chr14_-_20774111 BC030822 BX640732 BC053538 BX648584	-70	-	BC137054 BC137055 AB529289 NM_001004479	-63254	+	BC000369 BC001218 BC004435 NM_182852 BX161423 NM_182851 BX161424	23358	-	TSC_hg19_v1_chr14_-_20801439 AK026233 AK225451 AK309183 AK225253 AK226037 AL161994 NM_021178 NM_182849	27267	-	TSC_hg19_v1_chr14_+_20811783 NM_001042618 NM_005484	37570	+	AK074553|TTC5|91875|tetratricopeptide repeat domain 5##NM_138376|TTC5|91875|tetratricopeptide repeat domain 5##BX248066|TTC5|91875|tetratricopeptide repeat domain 5##BC008647|TTC5|91875|tetratricopeptide repeat domain 5##EU832467|TTC5|91875|tetratricopeptide repeat domain 5##BC030822|TTC5|91875|tetratricopeptide repeat domain 5##BX640732|TTC5|91875|tetratricopeptide repeat domain 5##BC053538|TTC5|91875|tetratricopeptide repeat domain 5##BX648584|TTC5|91875|tetratricopeptide repeat domain 5##BC137054|OR11H4|390442|olfactory receptor, family 11, subfamily H, member 4##BC137055|OR11H4|390442|olfactory receptor, family 11, subfamily H, member 4##NM_001004479|OR11H4|390442|olfactory receptor, family 11, subfamily H, member 4##BC000369|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##BC001218|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##BC004435|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##NM_182852|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##BX161423|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##NM_182851|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##BX161424|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##AK026233|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##AK225451|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##AK309183|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##AK225253|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##AK226037|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##AL161994|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##NM_021178|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##NM_182849|CCNB1IP1|57820|cyclin B1 interacting protein 1, E3 ubiquitin protein ligase##NM_001042618|PARP2|10038|poly (ADP-ribose) polymerase 2##NM_005484|PARP2|10038|poly (ADP-ribose) polymerase 2	0.056176	
chr16	28519481	28519629	reg1013292.p2	9.020	+	AY099296 CU687548 BC062422 NM_145659	-1413	-	TSC_hg19_v1_chr16_+_28505969 NM_018690 AF141332 AF141334 BC119786 BC119788	-13593	+	NM_001042432	-15933	-	AB463938 BT006896 CR542144 TSC_hg19_v1_chr16_-_28550296 BC002434 AK312135 AF135266	30717	-	TSC_hg19_v1_chr16_-_28550361 AF069073 NM_001042483 NM_012385	30854	-	TSC_hg19_v1_chr16_+_28565245 NM_138414 BC011981	45685	+	AY099296|IL27|246778|interleukin 27##BC062422|IL27|246778|interleukin 27##NM_145659|IL27|246778|interleukin 27##NM_018690|APOBR|55911|apolipoprotein B receptor##AF141332|APOBR|55911|apolipoprotein B receptor##AF141334|APOBR|55911|apolipoprotein B receptor##BC119786|APOBR|55911|apolipoprotein B receptor##BC119788|APOBR|55911|apolipoprotein B receptor##NM_001042432|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##BT006896|NUPR1|26471|nuclear protein, transcriptional regulator, 1##CR542144|NUPR1|26471|nuclear protein, transcriptional regulator, 1##BC002434|NUPR1|26471|nuclear protein, transcriptional regulator, 1##AK312135|NUPR1|26471|nuclear protein, transcriptional regulator, 1##AF135266|NUPR1|26471|nuclear protein, transcriptional regulator, 1##AF069073|NUPR1|26471|nuclear protein, transcriptional regulator, 1##NM_001042483|NUPR1|26471|nuclear protein, transcriptional regulator, 1##NM_012385|NUPR1|26471|nuclear protein, transcriptional regulator, 1##NM_138414|CCDC101|112869|coiled-coil domain containing 101##BC011981|CCDC101|112869|coiled-coil domain containing 101	0.595048	CTCF.p2:-9:0.595
chr16	88628489	88628581	reg1013066.p1	9.020	+	TSC_hg19_v1_chr16_+_88519921 NM_153813	-108570	+	TSC_hg19_v1_chr16_+_88519687 AF488691	-108830	+	NM_001127464	-134657	+	TSC_hg19_v1_chr16_+_88636807 NM_144604	8197	+	AK300254 AK302716 TSC_hg19_v1_chr16_+_88636810	8275	+	AK056632 AK225807 TSC_hg19_v1_chr16_+_88636823	8293	+	NM_153813|ZFPM1|161882|zinc finger protein, multitype 1##AF488691|ZFPM1|161882|zinc finger protein, multitype 1##NM_001127464|ZNF469|84627|zinc finger protein 469##NM_144604|ZC3H18|124245|zinc finger CCCH-type containing 18##AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18##AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18##AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18	0.999224	CTCF.p2:-26:0.999
chr3	172195188	172195321	reg1015628.p1	9.020	+	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	-29031	-	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-436917	+	TSC_hg19_v1_chr3_+_171757442 AY358367	-437796	+	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	45924	-	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	233636	-	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	273270	+	AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AY358367|FNDC3B|64778|fibronectin type III domain containing 3B##AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene	0.934452	CTCF.p2:20:0.502	CTCF.p2:21:0.432
chr7	107142161	107142294	reg1014548.p2	9.019	+	NM_005295 AK122621 AK307393	-31725	+	AK295910 NM_001244262 TSC_hg19_v1_chr7_+_106809447 AK298504 BC017069 NM_012257	-332788	+	TSC_hg19_v1_chr7_+_106685154 BC075800 M31158 NM_002736 AK128639 AK291441 AB384742 AM392728 AM392771 AM393258 AM393700 CU687290	-457024	+	TSC_hg19_v1_chr7_-_107204366 HQ258000 AF058718	62183	-	AK294095 NM_181581 AK297195 BC111774	62195	+	BC068540 TSC_hg19_v1_chr7_-_107204793 AK314270 NM_001161520 NM_006348 NM_181733	62604	-	NM_005295|GPR22|2845|G protein-coupled receptor 22##AK122621|GPR22|2845|G protein-coupled receptor 22##AK307393|GPR22|2845|G protein-coupled receptor 22##AK295910|HBP1|26959|HMG-box transcription factor 1##NM_001244262|HBP1|26959|HMG-box transcription factor 1##AK298504|HBP1|26959|HMG-box transcription factor 1##BC017069|HBP1|26959|HMG-box transcription factor 1##NM_012257|HBP1|26959|HMG-box transcription factor 1##BC075800|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##M31158|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##NM_002736|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK128639|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK291441|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392728|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392771|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393258|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393700|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##HQ258000|COG5|10466|component of oligomeric golgi complex 5##AF058718|COG5|10466|component of oligomeric golgi complex 5##AK294095|DUS4L|11062|dihydrouridine synthase 4-like (S. cerevisiae)##NM_181581|DUS4L|11062|dihydrouridine synthase 4-like (S. cerevisiae)##AK297195|DUS4L|11062|dihydrouridine synthase 4-like (S. cerevisiae)##BC111774|DUS4L|11062|dihydrouridine synthase 4-like (S. cerevisiae)##BC068540|COG5|10466|component of oligomeric golgi complex 5##AK314270|COG5|10466|component of oligomeric golgi complex 5##NM_001161520|COG5|10466|component of oligomeric golgi complex 5##NM_006348|COG5|10466|component of oligomeric golgi complex 5##NM_181733|COG5|10466|component of oligomeric golgi complex 5	0.883833	CTCF.p2:4:0.884
chr18	47085849	47085954	reg1012679.p2	9.017	+	TSC_hg19_v1_chr18_-_47018852 AK304659 AK311828 BC066323 BC017831 BC066324 NM_000985 NM_001035006 NM_001199340 NM_001199345 NM_001199356	-67013	-	TSC_hg19_v1_chr18_-_47018826 NM_001199341 NM_001199342 NM_001199343 NM_001199344 BC000502	-67072	-	TSC_hg19_v1_chr18_-_47018813 AK311720	-67103	-	TSC_hg19_v1_chr18_+_47087059 AK125344	1161	+	AK315252 TSC_hg19_v1_chr18_+_47088426 AF118767 AK291799 NM_006033 AK300333 BC060825 AY358928	2527	+	CU674934 DQ893376 DQ896697 AB529169 BC001918 TSC_hg19_v1_chr18_-_47339904 AK225457 D16294	254013	-	AK304659|RPL17|6139|ribosomal protein L17##AK311828|RPL17|6139|ribosomal protein L17##BC066323|RPL17|6139|ribosomal protein L17##BC017831|RPL17|6139|ribosomal protein L17##BC066324|RPL17|6139|ribosomal protein L17##NM_000985|RPL17|6139|ribosomal protein L17##NM_001035006|RPL17|6139|ribosomal protein L17##NM_001199340|RPL17|6139|ribosomal protein L17##NM_001199345|RPL17|6139|ribosomal protein L17##NM_001199356|RPL17-C18ORF32|100526842|RPL17-C18orf32 readthrough##NM_001199341|RPL17|6139|ribosomal protein L17##NM_001199342|RPL17|6139|ribosomal protein L17##NM_001199343|RPL17|6139|ribosomal protein L17##NM_001199344|RPL17|6139|ribosomal protein L17##BC000502|RPL17|6139|ribosomal protein L17##AK311720|RPL17|6139|ribosomal protein L17##AK125344|LIPG|9388|lipase, endothelial##AK315252|LIPG|9388|lipase, endothelial##AF118767|LIPG|9388|lipase, endothelial##AK291799|LIPG|9388|lipase, endothelial##NM_006033|LIPG|9388|lipase, endothelial##AK300333|LIPG|9388|lipase, endothelial##BC060825|LIPG|9388|lipase, endothelial##AY358928|LIPG|9388|lipase, endothelial##DQ893376|ACAA2|10449|acetyl-CoA acyltransferase 2##DQ896697|ACAA2|10449|acetyl-CoA acyltransferase 2##BC001918|ACAA2|10449|acetyl-CoA acyltransferase 2##AK225457|ACAA2|10449|acetyl-CoA acyltransferase 2##D16294|ACAA2|10449|acetyl-CoA acyltransferase 2	0.210764	CTCF.p2:-16:0.211
chr20	1987467	1987634	reg1015133.p3	9.016	+	AK316076 BC026334 AK295512 TSC_hg19_v1_chr20_-_1974732 AK308747 NM_001190898 NM_001190899 NM_024411	-12735	-	NM_001190900	-13157	-	AK289618 NM_001190892	-14099	-	GQ281297 NM_080836 AK314728	95051	+	BC140883 BC140884 TSC_hg19_v1_chr20_+_2083583 AB527968 AF195026 BC111573 BC017340 AK302629	95965	+	TSC_hg19_v1_chr20_-_2083527 BC034792	95976	-	AK316076|PDYN|5173|prodynorphin##BC026334|PDYN|5173|prodynorphin##NM_001190898|PDYN|5173|prodynorphin##NM_001190899|PDYN|5173|prodynorphin##NM_024411|PDYN|5173|prodynorphin##NM_001190900|PDYN|5173|prodynorphin##AK289618|PDYN|5173|prodynorphin##NM_001190892|PDYN|5173|prodynorphin##GQ281297|STK35|140901|serine/threonine kinase 35##NM_080836|STK35|140901|serine/threonine kinase 35##AK314728|STK35|140901|serine/threonine kinase 35##BC140883|STK35|140901|serine/threonine kinase 35##BC140884|STK35|140901|serine/threonine kinase 35##AF195026|STK35|140901|serine/threonine kinase 35##BC111573|STK35|140901|serine/threonine kinase 35##BC017340|STK35|140901|serine/threonine kinase 35##AK302629|STK35|140901|serine/threonine kinase 35	0.99984	CTCF.p2:-19:1.000
chr2	29044387	29044514	reg1015511.p1	9.016	+	NM_001008779 AB590634 AY820303 AY820304	-5579	+	BC093005 NM_001142634 NM_182756 BC047224	-10743	+	TSC_hg19_v1_chr2_+_28974924 BC002697 BC012045 AB464241 AM392772 BT019744 CR542263 CR542285	-69541	+	AK225551 CU674472 CU679681 TSC_hg19_v1_chr2_-_29093160 AK308821 BC010365 AL136689 BC000952 AK000635 AK225524 NM_017910	48709	-	TSC_hg19_v1_chr2_+_29117555 NM_015131 D26488	73088	+	AK296977 NM_199280	159713	+	NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)##AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)##AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)##BC093005|SPDYA|245711|speedy homolog A (Xenopus laevis)##NM_001142634|SPDYA|245711|speedy homolog A (Xenopus laevis)##NM_182756|SPDYA|245711|speedy homolog A (Xenopus laevis)##BC047224|SPDYA|245711|speedy homolog A (Xenopus laevis)##BC002697|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BC012045|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AM392772|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BT019744|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##CR542263|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##CR542285|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK225551|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##BC010365|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##AL136689|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##BC000952|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##AK225524|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##NM_017910|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##NM_015131|WDR43|23160|WD repeat domain 43##D26488|WDR43|23160|WD repeat domain 43##AK296977|FAM179A|165186|family with sequence similarity 179, member A##NM_199280|FAM179A|165186|family with sequence similarity 179, member A	0.779265	CTCF.p2:-32:0.779
chr1	154971695	154971849	reg1014076.p2	9.015	+	AF268478 BC069140 NM_018655 BC096714 BC098148 BC098246 BC098253 AB451457	-5700	+	BC011378 TSC_hg19_v1_chr1_+_154955840 AK025979 AF218022 AF520568 BC021096	-15925	+	NM_001184891 NM_001184892 NM_025207 NM_201398 TSC_hg19_v1_chr1_+_154955827 AK090542 AX746501 BC032323 AK308243	-15969	+	TSC_hg19_v1_chr1_+_154975120 NM_001252405 NM_015872 AK291619 CR749303 BC012070	3314	+	NM_001252406 TSC_hg19_v1_chr1_+_154975235 AK304762	3475	+	BC111794 AK057496 NM_144622	34473	-	AF268478|LENEP|55891|lens epithelial protein##BC069140|LENEP|55891|lens epithelial protein##NM_018655|LENEP|55891|lens epithelial protein##BC096714|LENEP|55891|lens epithelial protein##BC098148|LENEP|55891|lens epithelial protein##BC098246|LENEP|55891|lens epithelial protein##BC098253|LENEP|55891|lens epithelial protein##AB451457|LENEP|55891|lens epithelial protein##BC011378|FLAD1|80308|FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae)##AK025979|FLAD1|80308|FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae)##AF218022|FLAD1|80308|FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae)##AF520568|FLAD1|80308|FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae)##BC021096|FLAD1|80308|FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae)##NM_001184891|FLAD1|80308|FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae)##NM_001184892|FLAD1|80308|FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae)##NM_025207|FLAD1|80308|FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae)##NM_201398|FLAD1|80308|FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae)##AK090542|FLAD1|80308|FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae)##BC032323|FLAD1|80308|FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae)##AK308243|FLAD1|80308|FAD1 flavin adenine dinucleotide synthetase homolog (S. cerevisiae)##NM_001252405|ZBTB7B|51043|zinc finger and BTB domain containing 7B##NM_015872|ZBTB7B|51043|zinc finger and BTB domain containing 7B##AK291619|ZBTB7B|51043|zinc finger and BTB domain containing 7B##CR749303|ZBTB7B|51043|zinc finger and BTB domain containing 7B##BC012070|ZBTB7B|51043|zinc finger and BTB domain containing 7B##NM_001252406|ZBTB7B|51043|zinc finger and BTB domain containing 7B##AK304762|ZBTB7B|51043|zinc finger and BTB domain containing 7B##BC111794|DCST2|127579|DC-STAMP domain containing 2##AK057496|DCST2|127579|DC-STAMP domain containing 2##NM_144622|DCST2|127579|DC-STAMP domain containing 2	0.916831	CTCF.p2:-11:0.917
chr14	48868007	48868135	reg1014768.p1	9.015	+	AK309211 NM_001113498	-723915	-	BC028193 NM_182830	-1055656	-	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	-1747088	-	BC032813 BC035313 L31610 U14973 AK026649 BC015974 NM_001030001 NM_001032 AB055780 AK307833 TSC_hg19_v1_chr14_-_50053095	1185022	-	NM_152329 NM_203467 TSC_hg19_v1_chr14_+_50065473 BC030142 BX648029	1197389	+	TSC_hg19_v1_chr14_-_50087339 BC003145 BC000741 BC070207 AK311959 AB063609 NM_001001 BC107716	1219273	-	AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC032813|RPS29|6235|ribosomal protein S29##BC035313|RPS29|6235|ribosomal protein S29##L31610|RPS29|6235|ribosomal protein S29##U14973|RPS29|6235|ribosomal protein S29##AK026649|RPS29|6235|ribosomal protein S29##BC015974|RPS29|6235|ribosomal protein S29##NM_001030001|RPS29|6235|ribosomal protein S29##NM_001032|RPS29|6235|ribosomal protein S29##AB055780|RPS29|6235|ribosomal protein S29##NM_152329|LRR1|122769|leucine rich repeat protein 1##NM_203467|LRR1|122769|leucine rich repeat protein 1##BC030142|LRR1|122769|leucine rich repeat protein 1##BX648029|LRR1|122769|leucine rich repeat protein 1##BC003145|RPL36AL|6166|ribosomal protein L36a-like##BC000741|RPL36AL|6166|ribosomal protein L36a-like##BC070207|RPL36AL|6166|ribosomal protein L36a-like##AK311959|RPL36AL|6166|ribosomal protein L36a-like##AB063609|RPL36AL|6166|ribosomal protein L36a-like##NM_001001|RPL36AL|6166|ribosomal protein L36a-like##BC107716|RPL36AL|6166|ribosomal protein L36a-like	0.97802	CTCF.p2:10:0.978
chrX	45374556	45374658	reg1010689.p1	9.015	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	-314494	-	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-642171	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-671294	+	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	932104	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	1030249	-	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	1030337	+	BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588	0.676909	CTCF.p2:-17:0.677
chr17	77078858	77078950	reg1011266.p1	9.014	+	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-7874	+	AF329840 NM_198593 BC021553	-48382	+	TSC_hg19_v1_chr17_+_77020308 AK055541	-58594	+	NM_001082575	399658	-	AY230663 BC041453 NM_178543 AY358622	625985	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	673077	+	AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2	0.981073	CTCF.p2:8:0.981
chr10	46168065	46168178	reg1013521.p2	9.013	+	TSC_hg19_v1_chr10_-_46090318 BC066988 NM_001002265 NM_145021	-77827	-	AK313340 BC025394 NM_001002266 AK307667	-137302	-	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	-298424	+	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	93	-	NM_001169106 NM_001169107 NM_015262 TSC_hg19_v1_chr10_+_46222703 AK291430 AB011164 BC150611 AK303048 AK293929 BC053887	54586	+	BC171820 BC171833 AF411132 NM_133446	174792	-	BC066988|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002265|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_145021|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK313340|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC025394|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002266|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK307667|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001169106|FAM21C|253725|family with sequence similarity 21, member C##NM_001169107|FAM21C|253725|family with sequence similarity 21, member C##NM_015262|FAM21C|253725|family with sequence similarity 21, member C##AK291430|FAM21C|253725|family with sequence similarity 21, member C##AB011164|FAM21C|253725|family with sequence similarity 21, member C##BC150611|FAM21C|253725|family with sequence similarity 21, member C##AK303048|FAM21C|253725|family with sequence similarity 21, member C##AK293929|FAM21C|253725|family with sequence similarity 21, member C##BC053887|FAM21C|253725|family with sequence similarity 21, member C##BC171833|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##AF411132|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##NM_133446|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4	0.252725	CTCF.p2:-22:0.253
chr6	3849490	3849647	reg1015149.p1	9.013	+	NM_183373 TSC_hg19_v1_chr6_-_3752248	-97322	-	TSC_hg19_v1_chr6_-_3720312 BC031944	-129258	-	BC040876 NM_015482	-392805	-	BC001261 NM_012135 Y18503	58	+	TSC_hg19_v1_chr6_+_4021647 BC034969 NM_003913 AK291244 AB011108 AF283465 AB385345 AY029347	172021	+	BC039349 NM_173563	229855	-	NM_183373|PXDC1|221749|PX domain containing 1##BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23##BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B##BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##BC039349|C6orf146|222826|chromosome 6 open reading frame 146##NM_173563|C6orf146|222826|chromosome 6 open reading frame 146	1.786021	CTCF.p2:21:0.918	CTCF.p2:-61:0.868
chr9	103477024	103477137	reg1011829.p1	9.013	+	NM_001018116 AK300099 TSC_hg19_v1_chr9_+_103340380 EU487253 BC090888	-136691	+	TSC_hg19_v1_chr9_+_103235637 BC035056 DQ891732 DQ894909	-241351	+	TSC_hg19_v1_chr9_+_103235495 NM_003692	-241576	+	NM_207299 AK303807 TSC_hg19_v1_chr9_+_103791087	313986	+	AK000307 AK225306 BC029380 NM_017753 TSC_hg19_v1_chr9_+_103947336	470246	+	NM_001127610 AK315347	668742	-	NM_001018116|MURC|347273|muscle-related coiled-coil protein##AK300099|MURC|347273|muscle-related coiled-coil protein##EU487253|MURC|347273|muscle-related coiled-coil protein##BC090888|MURC|347273|muscle-related coiled-coil protein##BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_207299|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK303807|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_001127610|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##AK315347|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)	0.999787	CTCF.p2:5:1.000
chr10	82705158	82705270	reg1014161.p2	9.012	+	AK123978 NM_001145719	-404640	+	AK123885 NM_207372	-407557	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-491110	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	929868	+	DQ857894 NM_001165973	932228	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3194043	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.792908	CTCF.p2:1:0.747
chr17	28605206	28605309	reg1013713.p2	9.012	+	NM_001045	-42304	-	TSC_hg19_v1_chr17_+_28443846 AK297102 AL136806 NM_032141 AK094552 BC062425 AK313963 BC105044 BC105046 BC143417 BC143539 BC046116 BC040118 AF161358 BC016313 AB462988 AM392705 AM392719 CR533555	-161416	+	NM_198529 BX648689 BC137519	-336553	+	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	13702	-	NM_000386 TSC_hg19_v1_chr17_-_28619220	13946	-	AK290266 BC137201 BC137202 AY358153 NM_206832 AK172838	55805	-	NM_001045|SLC6A4|6532|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4##AK297102|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AL136806|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_032141|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK094552|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC062425|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK313963|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105044|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105046|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143417|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143539|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC046116|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC040118|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AF161358|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC016313|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392705|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392719|NSRP1|84081|nuclear speckle splicing regulatory protein 1##CR533555|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase##NM_000386|BLMH|642|bleomycin hydrolase##AK290266|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##BC137201|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##BC137202|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##AY358153|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##NM_206832|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##AK172838|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	0.510509	CTCF.p2:-5:0.511
chr18	58989632	58989736	reg1013408.p2	9.012	+	AK314130 NM_005912	-949684	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-1422455	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-1625034	-	AF217289 BC101047 BC101048 BC101049 NM_031891	168090	+	AK096495 NM_173557	570619	-	AF109219 TSC_hg19_v1_chr18_-_59854208	864510	-	AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.917209	CTCF.p2:-9:0.917
chr5	149036283	149036428	reg1016751.p1	9.012	+	AK300559 AK316002 BC041325 NM_001001669	-75271	+	TSC_hg19_v1_chr5_-_148931006 NM_001025105 NM_001892	-105349	-	TSC_hg19_v1_chr5_-_148930950 AK294942	-105389	-	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	73472	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	73521	+	AK123614 NM_001172699	115147	+	AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##NM_001025105|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001892|CSNK1A1|1452|casein kinase 1, alpha 1##AK294942|CSNK1A1|1452|casein kinase 1, alpha 1##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	0.961007	CTCF.p2:-16:0.961
chr9	9606637	9606770	reg1012579.p1	9.012	+	TSC_hg19_v1_chr9_+_8858136 AK094342	-748570	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-872784	-	TSC_hg19_v1_chr9_+_8713275 AY779046	-893411	+	BC028038 NM_002839	1006019	-	NM_000550 X51420 BC052608	3086722	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	3168313	+	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##AY779046|RPL18A|6142|ribosomal protein L18a##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150	0.975804	CTCF.p2:-6:0.976
chr1	16918381	16918493	reg1014867.p1	9.011	+	BC028053 TSC_hg19_v1_chr1_-_16825680	-92786	-	TSC_hg19_v1_chr1_+_16767236 BC017014 AK001282 AB463921 AK024468 AM393342	-151192	+	AK223344 TSC_hg19_v1_chr1_+_16767218 AK300764 AK302227 AK023545 BC018914	-151212	+	TSC_hg19_v1_chr1_-_16940046 AK123260 AY894575 NM_017940 BC066930 BC010124 BC082236 BC110431 AK055895 BC093404	21459	-	TSC_hg19_v1_chr1_-_16971175 AK090414	52729	-	AK123337 TSC_hg19_v1_chr1_-_16971178	52740	-	BC017014|NECAP2|55707|NECAP endocytosis associated 2##AK001282|NECAP2|55707|NECAP endocytosis associated 2##AK024468|NECAP2|55707|NECAP endocytosis associated 2##AM393342|NECAP2|55707|NECAP endocytosis associated 2##AK223344|NECAP2|55707|NECAP endocytosis associated 2##AK300764|NECAP2|55707|NECAP endocytosis associated 2##AK302227|NECAP2|55707|NECAP endocytosis associated 2##AK023545|NECAP2|55707|NECAP endocytosis associated 2##BC018914|NECAP2|55707|NECAP endocytosis associated 2##AK123260|NBPF1|55672|neuroblastoma breakpoint family, member 1##AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_017940|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC066930|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC010124|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC110431|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK055895|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC093404|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK123337|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2	0.968636	CTCF.p2:1:0.969
chr1	169898174	169898313	reg1013752.p1	9.011	+	TSC_hg19_v1_chr1_-_169863059 NM_020423 NM_181093	-35181	-	AL117233 TSC_hg19_v1_chr1_-_169863038 BC014662 AK292507	-35230	-	AL354614 NM_018186	-133694	+	AK122897 NM_001204517	139812	-	CU688542 DQ890952 DQ894114 AK026471 TSC_hg19_v1_chr1_-_170043807 AK315586 U59919 AK297368 AK303052 BC028679 NM_001204514 NM_001204516 NM_014970	145500	-	BC157860 BC171858 NM_001136107	216944	+	NM_020423|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##NM_181093|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##AL117233|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##BC014662|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##AK292507|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##AL354614|C1orf112|55732|chromosome 1 open reading frame 112##NM_018186|C1orf112|55732|chromosome 1 open reading frame 112##AK122897|KIFAP3|22920|kinesin-associated protein 3##NM_001204517|KIFAP3|22920|kinesin-associated protein 3##DQ890952|KIFAP3|22920|kinesin-associated protein 3##DQ894114|KIFAP3|22920|kinesin-associated protein 3##AK026471|KIFAP3|22920|kinesin-associated protein 3##AK315586|KIFAP3|22920|kinesin-associated protein 3##U59919|KIFAP3|22920|kinesin-associated protein 3##AK297368|KIFAP3|22920|kinesin-associated protein 3##AK303052|KIFAP3|22920|kinesin-associated protein 3##BC028679|KIFAP3|22920|kinesin-associated protein 3##NM_001204514|KIFAP3|22920|kinesin-associated protein 3##NM_001204516|KIFAP3|22920|kinesin-associated protein 3##NM_014970|KIFAP3|22920|kinesin-associated protein 3##BC157860|METTL11B|149281|methyltransferase like 11B##BC171858|METTL11B|149281|methyltransferase like 11B##NM_001136107|METTL11B|149281|methyltransferase like 11B	0.331891	CTCF.p2:-3:0.332
chr1	224108633	224108759	reg1016684.p1	9.011	+	NM_001031685 NM_005426 TSC_hg19_v1_chr1_-_224033682	-75002	-	TSC_hg19_v1_chr1_-_224033620 BC046150 AJ318888 U58334 BC058918	-75073	-	AB384887 TSC_hg19_v1_chr1_-_224033497 AK294432	-75233	-	NM_001136115 NM_015176 TSC_hg19_v1_chr1_+_224301812 AK001628 AK307892 BC031576 AK303381 CU689186	193114	+	TSC_hg19_v1_chr1_+_224370925 BC000961 NM_003676	262226	+	TSC_hg19_v1_chr1_+_224370941 AK308232 AF466375 AY423730 AF002668 CU674476	262291	+	NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2##BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2##AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2##U58334|TP53BP2|7159|tumor protein p53 binding protein, 2##BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2##AK294432|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_001136115|FBXO28|23219|F-box protein 28##NM_015176|FBXO28|23219|F-box protein 28##AK001628|FBXO28|23219|F-box protein 28##AK307892|FBXO28|23219|F-box protein 28##BC031576|FBXO28|23219|F-box protein 28##AK303381|FBXO28|23219|F-box protein 28##BC000961|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_003676|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AK308232|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF466375|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AY423730|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF002668|DEGS1|8560|delta(4)-desaturase, sphingolipid 1	0.973166	CTCF.p2:10:0.973
chr5	138587057	138587167	reg1014366.p1	9.011	+	TSC_hg19_v1_chr5_-_138534058 AJ299442 AK074624 NM_001037633 NM_022464	-53066	-	TSC_hg19_v1_chr5_-_138533998 AY358950 BC011568	-53104	-	AF547994 TSC_hg19_v1_chr5_-_138533996 AK075177	-53123	-	AK307872 NM_001194954 NM_199189 TSC_hg19_v1_chr5_+_138609537	22376	+	TSC_hg19_v1_chr5_+_138609789 BC036498 CR749625 AK293952 AJ224166 AJ224167 AJ224168 AJ224169 AJ224170	22692	+	TSC_hg19_v1_chr5_+_138629336 NM_018834	42227	+	AJ299442|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK074624|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_001037633|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_022464|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AY358950|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##BC011568|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AF547994|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK075177|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK307872|MATR3|9782|matrin 3##NM_001194954|MATR3|9782|matrin 3##NM_199189|MATR3|9782|matrin 3##BC036498|MATR3|9782|matrin 3##CR749625|MATR3|9782|matrin 3##AK293952|MATR3|9782|matrin 3##AJ224166|MATR3|9782|matrin 3##AJ224167|SNHG4|724102|small nucleolar RNA host gene 4 (non-protein coding)##AJ224168|SNHG4|724102|small nucleolar RNA host gene 4 (non-protein coding)##AJ224169|MATR3|9782|matrin 3##AJ224170|SNHG4|724102|small nucleolar RNA host gene 4 (non-protein coding)##NM_018834|MATR3|9782|matrin 3	0.966329	CTCF.p2:5:0.966
chr9	21789550	21789676	reg1006476.p1	9.011	+	AK124391 TSC_hg19_v1_chr9_-_21559834	-229831	-	AY358570 NM_176891	-307302	-	NM_024013 V00538 V00537 BC112300 BC112302 BC074928 BC074929 AB464595 CU686802 HQ258738 JN848523	-349134	+	TSC_hg19_v1_chr9_+_21802647 AF109294 AY712791 NM_002451 U22233 L40432 AK300592 AK309365	13027	+	BC026106 TSC_hg19_v1_chr9_+_21802660 BC012316 BC018625	13051	+	TSC_hg19_v1_chr9_+_21802691 CU693136 CR541670 CR541710	13104	+	AK124391|MIR31HG|554202|MIR31 host gene (non-protein coding)##AY358570|IFNE|338376|interferon, epsilon##NM_176891|IFNE|338376|interferon, epsilon##NM_024013|IFNA1|3439|interferon, alpha 1##V00538|IFNA1|3439|interferon, alpha 1##V00537|IFNA1|3439|interferon, alpha 1##BC112300|IFNA1|3439|interferon, alpha 1##BC112302|IFNA1|3439|interferon, alpha 1##BC074928|IFNA1|3439|interferon, alpha 1##BC074929|IFNA1|3439|interferon, alpha 1##HQ258738|IFNA1|3439|interferon, alpha 1##AF109294|MTAP|4507|methylthioadenosine phosphorylase##AY712791|MTAP|4507|methylthioadenosine phosphorylase##NM_002451|MTAP|4507|methylthioadenosine phosphorylase##U22233|MTAP|4507|methylthioadenosine phosphorylase##L40432|MTAP|4507|methylthioadenosine phosphorylase##AK300592|MTAP|4507|methylthioadenosine phosphorylase##AK309365|MTAP|4507|methylthioadenosine phosphorylase##BC026106|MTAP|4507|methylthioadenosine phosphorylase##BC012316|MTAP|4507|methylthioadenosine phosphorylase##BC018625|MTAP|4507|methylthioadenosine phosphorylase##CR541670|MTAP|4507|methylthioadenosine phosphorylase##CR541710|MTAP|4507|methylthioadenosine phosphorylase	1.952153	CTCF.p2:-1:1.000	CTCF.p2:24:0.952
chr12	63814020	63814155	reg1014511.p1	9.010	+	NM_000706	-267498	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	-269416	-	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	-485162	-	BC125215 BC125216 TSC_hg19_v1_chr12_-_64062283 AY358792 AL833344 AK310102 AK057511 BC068442 NM_173812	248209	-	TSC_hg19_v1_chr12_+_64173629 AB015633 NM_014254 BC013152 BC002596 AK289382 CU680528 DQ891077 DQ894259	359580	+	BX647105 BX647419 TSC_hg19_v1_chr12_+_64173925	359848	+	NM_000706|AVPR1A|552|arginine vasopressin receptor 1A##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A##BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC125215|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC125216|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AY358792|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AL833344|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK310102|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK057511|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC068442|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_173812|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AB015633|TMEM5|10329|transmembrane protein 5##NM_014254|TMEM5|10329|transmembrane protein 5##BC013152|TMEM5|10329|transmembrane protein 5##BC002596|TMEM5|10329|transmembrane protein 5##AK289382|TMEM5|10329|transmembrane protein 5##DQ891077|TMEM5|10329|transmembrane protein 5##DQ894259|TMEM5|10329|transmembrane protein 5##BX647105|TMEM5|10329|transmembrane protein 5##BX647419|TMEM5|10329|transmembrane protein 5	0.998425	CTCF.p2:3:0.998
chr14	49640612	49640724	reg1014336.p2	9.010	+	AK309211 NM_001113498	-1496512	-	BC028193 NM_182830	-1828253	-	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	-2519685	-	BC032813 BC035313 L31610 U14973 AK026649 BC015974 NM_001030001 NM_001032 AB055780 AK307833 TSC_hg19_v1_chr14_-_50053095	412425	-	NM_152329 NM_203467 TSC_hg19_v1_chr14_+_50065473 BC030142 BX648029	424792	+	TSC_hg19_v1_chr14_-_50087339 BC003145 BC000741 BC070207 AK311959 AB063609 NM_001001 BC107716	446676	-	AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC032813|RPS29|6235|ribosomal protein S29##BC035313|RPS29|6235|ribosomal protein S29##L31610|RPS29|6235|ribosomal protein S29##U14973|RPS29|6235|ribosomal protein S29##AK026649|RPS29|6235|ribosomal protein S29##BC015974|RPS29|6235|ribosomal protein S29##NM_001030001|RPS29|6235|ribosomal protein S29##NM_001032|RPS29|6235|ribosomal protein S29##AB055780|RPS29|6235|ribosomal protein S29##NM_152329|LRR1|122769|leucine rich repeat protein 1##NM_203467|LRR1|122769|leucine rich repeat protein 1##BC030142|LRR1|122769|leucine rich repeat protein 1##BX648029|LRR1|122769|leucine rich repeat protein 1##BC003145|RPL36AL|6166|ribosomal protein L36a-like##BC000741|RPL36AL|6166|ribosomal protein L36a-like##BC070207|RPL36AL|6166|ribosomal protein L36a-like##AK311959|RPL36AL|6166|ribosomal protein L36a-like##AB063609|RPL36AL|6166|ribosomal protein L36a-like##NM_001001|RPL36AL|6166|ribosomal protein L36a-like##BC107716|RPL36AL|6166|ribosomal protein L36a-like	0.86911	CTCF.p2:10:0.869
chr4	75186308	75186440	reg1014404.p1	9.010	+	AK289455 BC127938 BC127939 DQ235269 AY358920 NM_001013442 DQ235264 DQ235265 DQ235266 DQ235267 DQ235268	-12155	+	TSC_hg19_v1_chr4_+_75023834 AX794782 BC037529 NM_001144978 BC041943 AX794779	-162509	+	NM_002089 TSC_hg19_v1_chr4_-_74965027	-221352	-	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	44566	+	BC009799 M30704 NM_001657	124478	+	BC009799 M30704 NM_001657	294254	+	AK289455|EPGN|255324|epithelial mitogen homolog (mouse)##BC127938|EPGN|255324|epithelial mitogen homolog (mouse)##BC127939|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235269|EPGN|255324|epithelial mitogen homolog (mouse)##AY358920|EPGN|255324|epithelial mitogen homolog (mouse)##NM_001013442|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235264|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235265|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235266|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235267|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235268|EPGN|255324|epithelial mitogen homolog (mouse)##BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_002089|CXCL2|2920|chemokine (C-X-C motif) ligand 2##AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin	0.475749	CTCF.p2:-15:0.311
chr7	150475924	150476051	reg1013642.p2	9.010	+	NM_001162367	-29164	+	TSC_hg19_v1_chr7_+_150434679 BC033688 BC011732	-41297	+	NM_018384 TSC_hg19_v1_chr7_+_150434485 AK002158 AK297881	-41512	+	TSC_hg19_v1_chr7_-_150497453 AK315575 AK000841 BC091471 AK129525 NM_001101311 NM_001101312 NM_001101314	21522	-	BC008303 TSC_hg19_v1_chr7_+_150497852 NM_018487 AF258340	21885	+	BC004358 BC014586 NM_014020 AK097304	22418	-	NM_001162367|LOC100128542|100128542|uncharacterized LOC100128542##BC033688|GIMAP5|55340|GTPase, IMAP family member 5##BC011732|GIMAP5|55340|GTPase, IMAP family member 5##NM_018384|GIMAP5|55340|GTPase, IMAP family member 5##AK002158|GIMAP5|55340|GTPase, IMAP family member 5##AK297881|GIMAP5|55340|GTPase, IMAP family member 5##AK315575|TMEM176B|28959|transmembrane protein 176B##AK000841|TMEM176B|28959|transmembrane protein 176B##BC091471|TMEM176B|28959|transmembrane protein 176B##AK129525|TMEM176B|28959|transmembrane protein 176B##NM_001101311|TMEM176B|28959|transmembrane protein 176B##NM_001101312|TMEM176B|28959|transmembrane protein 176B##NM_001101314|TMEM176B|28959|transmembrane protein 176B##BC008303|TMEM176A|55365|transmembrane protein 176A##NM_018487|TMEM176A|55365|transmembrane protein 176A##AF258340|TMEM176A|55365|transmembrane protein 176A##BC004358|TMEM176B|28959|transmembrane protein 176B##BC014586|TMEM176B|28959|transmembrane protein 176B##NM_014020|TMEM176B|28959|transmembrane protein 176B##AK097304|TMEM176B|28959|transmembrane protein 176B	0.989956	CTCF.p2:0:0.990
chrX	53100827	53100990	reg1014785.p2	9.010	+	BC009861 NM_018969	-22403	+	BC067819 NM_001242489 NM_001242490 NM_001242492 NM_001242493 NM_001242494 NM_001242495 NM_001242496 NM_001242497 NM_014138	-76262	-	AK091598 AX747084 BX649013 CR749619 TSC_hg19_v1_chrX_-_52987693 AK057692 NM_001242491	-113246	-	TSC_hg19_v1_chrX_+_53111548 NM_022117 AK131220 AK292462 AY040871 AF273046 BC024270 AL713652 AB463325 AM392716 AF254794	10734	+	TSC_hg19_v1_chrX_+_53123332 EF565109	22498	+	BC054499 BC047751 TSC_hg19_v1_chrX_-_53254393 AK308077 AK304732	153479	-	BC009861|GPR173|54328|G protein-coupled receptor 173##NM_018969|GPR173|54328|G protein-coupled receptor 173##BC067819|FAM156A|29057|family with sequence similarity 156, member A##NM_001242489|FAM156A|29057|family with sequence similarity 156, member A##NM_001242490|FAM156A|29057|family with sequence similarity 156, member A##NM_001242492|FAM156A|29057|family with sequence similarity 156, member A##NM_001242493|FAM156A|29057|family with sequence similarity 156, member A##NM_001242494|FAM156A|29057|family with sequence similarity 156, member A##NM_001242495|FAM156A|29057|family with sequence similarity 156, member A##NM_001242496|FAM156A|29057|family with sequence similarity 156, member A##NM_001242497|FAM156A|29057|family with sequence similarity 156, member A##NM_014138|FAM156A|29057|family with sequence similarity 156, member A##AK091598|FAM156B|727866|family with sequence similarity 156, member B##BX649013|FAM156B|727866|family with sequence similarity 156, member B##CR749619|FAM156A|29057|family with sequence similarity 156, member A##AK057692|FAM156A|29057|family with sequence similarity 156, member A##NM_001242491|FAM156A|29057|family with sequence similarity 156, member A##NM_022117|TSPYL2|64061|TSPY-like 2##AK131220|TSPYL2|64061|TSPY-like 2##AK292462|TSPYL2|64061|TSPY-like 2##AY040871|TSPYL2|64061|TSPY-like 2##AF273046|TSPYL2|64061|TSPY-like 2##BC024270|TSPYL2|64061|TSPY-like 2##AL713652|TSPYL2|64061|TSPY-like 2##AM392716|TSPYL2|64061|TSPY-like 2##AF254794|TSPYL2|64061|TSPY-like 2##EF565109|LOC100132984|100132984|uncharacterized LOC100132984##BC054499|KDM5C|8242|lysine (K)-specific demethylase 5C##BC047751|KDM5C|8242|lysine (K)-specific demethylase 5C##AK308077|KDM5C|8242|lysine (K)-specific demethylase 5C##AK304732|KDM5C|8242|lysine (K)-specific demethylase 5C	0.947197	CTCF.p2:-17:0.947
chr20	47863166	47863278	reg1012808.p2	9.009	+	TSC_hg19_v1_chr20_+_47835964 BC009304 BC011927 BC016060 HQ258546	-27248	+	TSC_hg19_v1_chr20_+_47835954 AK022979	-27264	+	NM_017895 BC126287 BC130275 BC144125 BC104480 HQ258508 AY044431 AL832131 EU718675 TSC_hg19_v1_chr20_+_47835952 AK300135	-27330	+	BC041630 TSC_hg19_v1_chr20_-_47874187	10946	-	BC110888 BC014041 AB037825 AK002139 TSC_hg19_v1_chr20_-_47894585	31355	-	TSC_hg19_v1_chr20_-_47894629 BC030789 NM_021035	31451	-	BC009304|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC011927|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC016060|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##HQ258546|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AK022979|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##NM_017895|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC126287|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC130275|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC144125|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC104480|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##HQ258508|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AY044431|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AL832131|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##EU718675|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AK300135|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC041630|ZNFX1|57169|zinc finger, NFX1-type containing 1##BC110888|ZNFX1|57169|zinc finger, NFX1-type containing 1##BC014041|ZNFX1|57169|zinc finger, NFX1-type containing 1##AB037825|ZNFX1|57169|zinc finger, NFX1-type containing 1##AK002139|ZNFX1|57169|zinc finger, NFX1-type containing 1##BC030789|ZNFX1|57169|zinc finger, NFX1-type containing 1##NM_021035|ZNFX1|57169|zinc finger, NFX1-type containing 1	0.79752	CTCF.p2:-12:0.798
chr6	147712205	147712328	reg1015886.p1	9.009	+	TSC_hg19_v1_chr6_+_147527118 AK128121	-185156	+	NM_001127715 NM_139244 AL834152 BC107737 BC113382 BC113408	-186710	+	TSC_hg19_v1_chr6_+_147524880 BC043645	-187392	+	TSC_hg19_v1_chr6_+_147829825 NM_001030060	117553	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	951497	+	TSC_hg19_v1_chr6_+_148663973 AB018333	951724	+	AK128121|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001127715|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_139244|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AL834152|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC107737|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113382|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113408|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC043645|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001030060|SAMD5|389432|sterile alpha motif domain containing 5##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1	0.438415	CTCF.p2:-11:0.438
chr2	207846592	207846700	reg1012297.p1	9.008	+	BC112076 BC112078 NM_173077 AJ422118	-42346	+	AK021557 TSC_hg19_v1_chr2_+_207630326 AK001516 AF223470 AL833877	-216323	+	NM_001136193 NM_001136194 NM_014929	-216535	+	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	184010	-	BC012919 TSC_hg19_v1_chr2_-_208031680	184979	-	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	547997	+	BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##AK021557|FASTKD2|22868|FAST kinase domains 2##AK001516|FASTKD2|22868|FAST kinase domains 2##AF223470|FASTKD2|22868|FAST kinase domains 2##AL833877|FASTKD2|22868|FAST kinase domains 2##NM_001136193|FASTKD2|22868|FAST kinase domains 2##NM_001136194|FASTKD2|22868|FAST kinase domains 2##NM_014929|FASTKD2|22868|FAST kinase domains 2##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1	0.986944	CTCF.p2:-12:0.987
chr14	96080800	96080921	reg1012318.p1	9.007	+	TSC_hg19_v1_chr14_+_96001402 DQ083331	-79427	+	AB223038 TSC_hg19_v1_chr14_+_96001383	-79477	+	TSC_hg19_v1_chr14_+_96001362 BX248075 BC023528 BC047680	-79492	+	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	71918	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	99607	-	AK023027 TSC_hg19_v1_chr14_+_96342762	261885	+	DQ083331|GLRX5|51218|glutaredoxin 5##AB223038|GLRX5|51218|glutaredoxin 5##BX248075|GLRX5|51218|glutaredoxin 5##BC023528|GLRX5|51218|glutaredoxin 5##BC047680|GLRX5|51218|glutaredoxin 5##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##AK023027|LOC100507043|100507043|uncharacterized LOC100507043	0.0	
chr3	5772906	5773030	reg1014988.p1	9.007	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-543477	+	TSC_hg19_v1_chr3_+_5229430 D86967	-543535	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	-543605	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	1129831	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	1129930	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	2770362	-	DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK124088|LOC100288428|100288428|uncharacterized LOC100288428	0.460203	CTCF.p2:11:0.429
chr7	139475732	139475858	reg1013217.p1	9.007	+	NM_001080511	-267122	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-307363	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-430781	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	2110	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	2244	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	53297	+	NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.422325	CTCF.p2:-14:0.410
chr11	8268962	8269108	reg1014055.p1	9.006	+	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	-78472	-	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-166236	+	NM_003320 U82467	-208856	+	BC069752 BC069793 M26682 NM_002315	16317	-	AK093251 AX748014 BC031231 NM_030906	346422	-	AK293193 TSC_hg19_v1_chr11_-_8615705	346668	-	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##NM_003320|TUB|7275|tubby homolog (mouse)##U82467|TUB|7275|tubby homolog (mouse)##BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33##AK293193|STK33|65975|serine/threonine kinase 33	0.997959	CTCF.p2:1:0.998
chr1	231739869	231739985	reg1013801.p2	9.006	+	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	-75496	+	AF229245 NM_022051	-179138	-	TSC_hg19_v1_chr1_+_231473794 BC015740	-266140	+	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	22628	+	BC006013 NM_020808 AY168879	911342	-	TSC_hg19_v1_chr1_-_232878472 AK093200	1138530	-	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)##NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)##BC015740|C1orf124|83932|chromosome 1 open reading frame 124##AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1##BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	0.996147	CTCF.p2:10:0.996
chr15	40882104	40882211	reg1013481.p1	9.006	+	TSC_hg19_v1_chr15_+_40861536 AK055971 AK301706 NM_152260 CU677781	-20573	+	TSC_hg19_v1_chr15_+_40861527 AK293145 BC016967	-20629	+	BC007697 TSC_hg19_v1_chr15_+_40861516	-20640	+	AF173994 TSC_hg19_v1_chr15_+_40886230 BC043597	4068	+	TSC_hg19_v1_chr15_+_40886474 AB022190 BC014306 NM_144508 NM_170589 AK307605 AK307996 AF248041 AF461041 BC029373	4307	+	TSC_hg19_v1_chr15_-_40987295 AK125393	105138	-	AK055971|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2##AK301706|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2##NM_152260|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2##AK293145|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2##BC016967|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2##BC007697|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2##AF173994|CASC5|57082|cancer susceptibility candidate 5##BC043597|CASC5|57082|cancer susceptibility candidate 5##AB022190|CASC5|57082|cancer susceptibility candidate 5##BC014306|CASC5|57082|cancer susceptibility candidate 5##NM_144508|CASC5|57082|cancer susceptibility candidate 5##NM_170589|CASC5|57082|cancer susceptibility candidate 5##AK307605|CASC5|57082|cancer susceptibility candidate 5##AK307996|CASC5|57082|cancer susceptibility candidate 5##AF248041|CASC5|57082|cancer susceptibility candidate 5##AF461041|CASC5|57082|cancer susceptibility candidate 5##BC029373|CASC5|57082|cancer susceptibility candidate 5##AK125393|LOC100505648|100505648|uncharacterized LOC100505648	0.880735	CTCF.p2:0:0.881
chr15	89902202	89902315	reg1003170.p2	9.006	+	TSC_hg19_v1_chr15_-_89878042 AK291281	-24215	-	BC050559 BC042571 NM_001126131 NM_002693 X98093 TSC_hg19_v1_chr15_-_89878036	-24237	-	TSC_hg19_v1_chr15_+_89787255 AK055176 BC140769 BC144483 BC004277	-115008	+	CU689056 AY257182 AF193809 NM_016321 BC015461 AK298252 AK298641 AF081497 AK301640 AK313238 BC030965 AK290899 AK310222	137537	-	TSC_hg19_v1_chr15_+_90118742 GQ227787 NM_152259	216520	+	TSC_hg19_v1_chr15_-_90198681 BC042063 NM_198525	296362	-	AK291281|POLG|5428|polymerase (DNA directed), gamma##BC050559|POLG|5428|polymerase (DNA directed), gamma##BC042571|POLG|5428|polymerase (DNA directed), gamma##NM_001126131|POLG|5428|polymerase (DNA directed), gamma##NM_002693|POLG|5428|polymerase (DNA directed), gamma##X98093|POLG|5428|polymerase (DNA directed), gamma##AK055176|FANCI|55215|Fanconi anemia, complementation group I##BC140769|FANCI|55215|Fanconi anemia, complementation group I##BC144483|FANCI|55215|Fanconi anemia, complementation group I##BC004277|FANCI|55215|Fanconi anemia, complementation group I##AY257182|RHCG|51458|Rh family, C glycoprotein##AF193809|RHCG|51458|Rh family, C glycoprotein##NM_016321|RHCG|51458|Rh family, C glycoprotein##BC015461|RHCG|51458|Rh family, C glycoprotein##AK298252|RHCG|51458|Rh family, C glycoprotein##AK298641|RHCG|51458|Rh family, C glycoprotein##AF081497|RHCG|51458|Rh family, C glycoprotein##AK301640|RHCG|51458|Rh family, C glycoprotein##AK313238|RHCG|51458|Rh family, C glycoprotein##BC030965|RHCG|51458|Rh family, C glycoprotein##AK290899|RHCG|51458|Rh family, C glycoprotein##AK310222|RHCG|51458|Rh family, C glycoprotein##GQ227787|C15orf42|90381|chromosome 15 open reading frame 42##NM_152259|C15orf42|90381|chromosome 15 open reading frame 42##BC042063|KIF7|374654|kinesin family member 7##NM_198525|KIF7|374654|kinesin family member 7	0.40065	CTCF.p2:24:0.401
chr2	84542061	84542173	reg1012339.p2	9.006	+	TSC_hg19_v1_chr2_-_80531838 AK225779	-4010274	-	TSC_hg19_v1_chr2_-_80531719 AK290512	-4010392	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	-4010592	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	144253	-	AK296741 TSC_hg19_v1_chr2_-_84686396	144278	-	NM_003849	144468	-	AK225779|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit	0.998994	CTCF.p2:6:0.999
chr4	164469767	164469883	reg1014797.p1	9.006	+	TSC_hg19_v1_chr4_+_164415868 BC011842	-53952	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-53983	+	TSC_hg19_v1_chr4_+_164415817 BC017418 AK298235	-54009	+	AB463878 AK000675 AK301408 NM_017923	64890	-	NM_012403	649037	-	AK289711 NM_001166373	834581	-	BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##BC017418|C4orf43|55319|chromosome 4 open reading frame 43##AK298235|C4orf43|55319|chromosome 4 open reading frame 43##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	0.016052	
chr20	37740812	37740947	reg1016729.p1	9.005	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-149890	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-185811	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-185890	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1576998	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1916615	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1916785	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.029653	
chr8	20238426	20238564	reg1014050.p2	9.005	+	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	-125749	-	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	-183573	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	-183602	+	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	1407297	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	1407871	-	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	1532670	-	AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa	0.668129	CTCF.p2:-20:0.668
chr8	24276858	24276992	reg1013452.p2	9.005	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	-35018	+	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	-125318	+	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	-564614	-	BC058037 AK292492 NM_003817 AF215824 CU691292 AB527100	21606	+	TSC_hg19_v1_chr8_+_24771273 AK296226 BC071752 EF560736 NM_005382	494346	+	EF560737 TSC_hg19_v1_chr8_+_24771276 BC096757 GQ129242 GQ129243 AB527839	494366	+	NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1##BC058037|ADAM7|8756|ADAM metallopeptidase domain 7##AK292492|ADAM7|8756|ADAM metallopeptidase domain 7##NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7##AF215824|ADAM7|8756|ADAM metallopeptidase domain 7##AK296226|NEFM|4741|neurofilament, medium polypeptide##BC071752|NEFM|4741|neurofilament, medium polypeptide##EF560736|NEFM|4741|neurofilament, medium polypeptide##NM_005382|NEFM|4741|neurofilament, medium polypeptide##EF560737|NEFM|4741|neurofilament, medium polypeptide##BC096757|NEFM|4741|neurofilament, medium polypeptide##GQ129242|NEFM|4741|neurofilament, medium polypeptide##GQ129243|NEFM|4741|neurofilament, medium polypeptide	0.640058	CTCF.p2:22:0.640
chr2	175470570	175470689	reg1015029.p1	9.004	+	TSC_hg19_v1_chr2_-_175462533 BC002914 X86019	-8148	-	BC036681 AK091200 AK315125 AX746845 BC028730 AL834154 TSC_hg19_v1_chr2_-_175351812 AK307896 BX537947 NM_001033045 NM_152529 BC035037	-118832	-	BC119684 BC119685 BC119685 TSC_hg19_v1_chr2_+_175260519	-210071	+	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	28668	-	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	77125	-	TSC_hg19_v1_chr2_+_175584527 DQ895855	113949	+	BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1##X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC036681|GPR155|151556|G protein-coupled receptor 155##AK091200|GPR155|151556|G protein-coupled receptor 155##AK315125|GPR155|151556|G protein-coupled receptor 155##BC028730|GPR155|151556|G protein-coupled receptor 155##AL834154|GPR155|151556|G protein-coupled receptor 155##AK307896|GPR155|151556|G protein-coupled receptor 155##BX537947|GPR155|151556|G protein-coupled receptor 155##NM_001033045|GPR155|151556|G protein-coupled receptor 155##NM_152529|GPR155|151556|G protein-coupled receptor 155##BC035037|GPR155|151556|G protein-coupled receptor 155##BC119684|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1##DQ895855|H3F3A|3020|H3 histone, family 3A	0.034449	
chr3	127945783	127945892	reg1012625.p1	9.004	+	TSC_hg19_v1_chr3_+_127872325 BC007933 AF268872	-73399	+	TSC_hg19_v1_chr3_+_127872314 NM_021937	-73528	+	AB451224 AB451347 AB590226 BT007057 DQ469310 DQ891448 DQ894627 BC012886 TSC_hg19_v1_chr3_-_127842656 AB012122 AF099084 BC000519 BC002993 AF070735 AJ010058 AK222575 Y18418 AK222563 AK312290 NM_003707	-103214	-	BC050288 NM_153330	240253	-	TSC_hg19_v1_chr3_+_128199744 CU677364 CU678039	253966	+	M77810 BC015577 BC018988 BC051272 NM_001145662 M68891 TSC_hg19_v1_chr3_-_128206775	260902	-	BC007933|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AF268872|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##NM_021937|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AB451224|RUVBL1|8607|RuvB-like 1 (E. coli)##AB451347|RUVBL1|8607|RuvB-like 1 (E. coli)##BT007057|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ469310|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ891448|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ894627|RUVBL1|8607|RuvB-like 1 (E. coli)##BC012886|RUVBL1|8607|RuvB-like 1 (E. coli)##AB012122|RUVBL1|8607|RuvB-like 1 (E. coli)##AF099084|RUVBL1|8607|RuvB-like 1 (E. coli)##BC002993|RUVBL1|8607|RuvB-like 1 (E. coli)##AF070735|RUVBL1|8607|RuvB-like 1 (E. coli)##AJ010058|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222575|RUVBL1|8607|RuvB-like 1 (E. coli)##Y18418|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222563|RUVBL1|8607|RuvB-like 1 (E. coli)##AK312290|RUVBL1|8607|RuvB-like 1 (E. coli)##NM_003707|RUVBL1|8607|RuvB-like 1 (E. coli)##BC050288|DNAJB8|165721|DnaJ (Hsp40) homolog, subfamily B, member 8##NM_153330|DNAJB8|165721|DnaJ (Hsp40) homolog, subfamily B, member 8##M77810|GATA2|2624|GATA binding protein 2##BC015577|GATA2|2624|GATA binding protein 2##BC018988|GATA2|2624|GATA binding protein 2##BC051272|GATA2|2624|GATA binding protein 2##NM_001145662|GATA2|2624|GATA binding protein 2##M68891|GATA2|2624|GATA binding protein 2	0.852983	CTCF.p2:-5:0.853
chr3	5178469	5178591	reg1013766.p1	9.004	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	-14439	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	-14575	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-157176	+	TSC_hg19_v1_chr3_+_5229344 AK298511	50797	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	50833	+	TSC_hg19_v1_chr3_+_5229430 D86967	50903	+	AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	0.704925	CTCF.p2:0:0.705
chr6_cox_hap2	4427176	4427293	reg1013392.p1	9.004	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.982461	CTCF.p2:-14:0.982
chr11	5627150	5627267	reg1012506.p1	9.003	+	AK290172 NM_001003818 NM_001003819 NM_001198644 NM_001198645 BC047564 BC136871 BC140722 BC144424 AB039903 BC065575 AK293295 AK298301 AK316178	-9259	+	NM_058166 AK027664 AK316289 AF220030 CR749260	-9864	+	NM_001005162	-25102	+	AB039902 NM_001003827	13965	+	NM_021616 AK027876 AF220143 AF220144	19018	+	NM_130390 AB039904	26289	+	AK290172|TRIM6|117854|tripartite motif containing 6##NM_001003818|TRIM6|117854|tripartite motif containing 6##NM_001003819|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##NM_001198644|TRIM6|117854|tripartite motif containing 6##NM_001198645|TRIM6|117854|tripartite motif containing 6##BC047564|TRIM6|117854|tripartite motif containing 6##BC136871|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##BC140722|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##BC144424|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##AB039903|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##BC065575|TRIM6|117854|tripartite motif containing 6##AK293295|TRIM6|117854|tripartite motif containing 6##AK298301|TRIM6|117854|tripartite motif containing 6##AK316178|TRIM6|117854|tripartite motif containing 6##NM_058166|TRIM6|117854|tripartite motif containing 6##AK027664|TRIM6|117854|tripartite motif containing 6##AK316289|TRIM6|117854|tripartite motif containing 6##AF220030|TRIM6|117854|tripartite motif containing 6##CR749260|TRIM6|117854|tripartite motif containing 6##NM_001005162|OR52B6|340980|olfactory receptor, family 52, subfamily B, member 6##AB039902|TRIM34|53840|tripartite motif containing 34##NM_001003827|TRIM34|53840|tripartite motif containing 34##NM_021616|TRIM34|53840|tripartite motif containing 34##AK027876|TRIM34|53840|tripartite motif containing 34##AF220143|TRIM34|53840|tripartite motif containing 34##AF220144|TRIM34|53840|tripartite motif containing 34##NM_130390|TRIM34|53840|tripartite motif containing 34##AB039904|TRIM34|53840|tripartite motif containing 34	0.46959	CTCF.p2:-15:0.470
chr18	73439560	73439669	reg1012059.p1	9.003	+	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-299992	-	TSC_hg19_v1_chr18_+_72998258 AK223545 BC024152	-441272	+	TSC_hg19_v1_chr18_+_72922751 NM_005786 AK091155 AX746813	-516869	+	BC108287 TSC_hg19_v1_chr18_-_74092260	652636	-	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	767541	-	TSC_hg19_v1_chr18_-_74534239 BC032908	1094625	-	BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1##BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1##NM_005786|TSHZ1|10194|teashirt zinc finger homeobox 1##BC108287|ZNF516|9658|zinc finger protein 516##D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC032908|LOC100131655|100131655|uncharacterized LOC100131655	0.317675	CTCF.p2:-13:0.318
chr19	13306654	13306774	reg1014932.p1	9.003	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-42534	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-45422	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-45575	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	310462	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	535865	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	552005	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.664916	CTCF.p2:-17:0.665
chr20	32886227	32886338	reg1014631.p1	9.003	+	NM_001672 BC104238 BC104239	-38108	+	TSC_hg19_v1_chr20_-_32700082 NM_003908	-186197	-	AB451237 AB451362 BT009795 CR456734 CU674464 AB590122 TSC_hg19_v1_chr20_-_32700021 AB208966 M29536 BC107588 BC000934 AK313025 BC000461	-186286	-	BT006697 CU679982 DQ890569 DQ891701 DQ893730 DQ895397 TSC_hg19_v1_chr20_-_32891162 M61832 M61831 BC010018 BC011606 AK300014 AK316180 AK290422 AK309204 NM_000687	4862	-	AK097610 NM_001161766	13325	-	TSC_hg19_v1_chr20_+_32951078 NM_031483 AK297809 AK304090 AK315212 BC011571 AB056663	64810	+	NM_001672|ASIP|434|agouti signaling protein##BC104238|ASIP|434|agouti signaling protein##BC104239|ASIP|434|agouti signaling protein##NM_003908|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB451237|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB451362|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BT009795|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##CR456734|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB208966|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##M29536|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC107588|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000934|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AK313025|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000461|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BT006697|AHCY|191|adenosylhomocysteinase##DQ890569|AHCY|191|adenosylhomocysteinase##DQ891701|AHCY|191|adenosylhomocysteinase##DQ893730|AHCY|191|adenosylhomocysteinase##DQ895397|AHCY|191|adenosylhomocysteinase##M61832|AHCY|191|adenosylhomocysteinase##M61831|AHCY|191|adenosylhomocysteinase##BC010018|AHCY|191|adenosylhomocysteinase##BC011606|AHCY|191|adenosylhomocysteinase##AK300014|AHCY|191|adenosylhomocysteinase##AK316180|AHCY|191|adenosylhomocysteinase##AK290422|AHCY|191|adenosylhomocysteinase##AK309204|AHCY|191|adenosylhomocysteinase##NM_000687|AHCY|191|adenosylhomocysteinase##AK097610|AHCY|191|adenosylhomocysteinase##NM_001161766|AHCY|191|adenosylhomocysteinase##NM_031483|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK297809|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK304090|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK315212|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##BC011571|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AB056663|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)	0.830069	CTCF.p2:-3:0.830
chr6	74564840	74564976	reg1013988.p2	9.003	+	TSC_hg19_v1_chr6_+_74406033 AY149920	-158884	+	EF553520 TSC_hg19_v1_chr6_+_74405925 AY788891 BX641095	-158988	+	TSC_hg19_v1_chr6_+_74405882 AK095888	-159037	+	BC146868 U73778 NM_004370 NM_080645 TSC_hg19_v1_chr6_-_75915745	1350747	-	TSC_hg19_v1_chr6_-_75915768 AK307558	1350872	-	CR407646 CR542125 X15822 TSC_hg19_v1_chr6_-_75953494 BC101826 BC101828 AK312154	1388571	-	AY149920|CD109|135228|CD109 molecule##EF553520|CD109|135228|CD109 molecule##AY788891|CD109|135228|CD109 molecule##BX641095|CD109|135228|CD109 molecule##AK095888|CD109|135228|CD109 molecule##BC146868|COL12A1|1303|collagen, type XII, alpha 1##U73778|COL12A1|1303|collagen, type XII, alpha 1##NM_004370|COL12A1|1303|collagen, type XII, alpha 1##NM_080645|COL12A1|1303|collagen, type XII, alpha 1##AK307558|COL12A1|1303|collagen, type XII, alpha 1##CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	0.999279	CTCF.p2:-13:0.999
chr16	86907848	86907975	reg1016874.p1	9.002	+	BC100027 NM_005250	-295797	+	BC113437 BC113439 NM_005251	-307055	+	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	-319139	-	TSC_hg19_v1_chr16_-_87350760 AB528835 AM392822 AM393070	442889	-	TSC_hg19_v1_chr16_-_87350999 BC015536 AK026130 NM_001195124 NM_001195125	443075	-	TSC_hg19_v1_chr16_-_87417364 AY736035 AF428140 BC012748 BC002985 NM_024735	509451	-	BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AM392822|C16orf95|100506581|chromosome 16 open reading frame 95##AM393070|C16orf95|100506581|chromosome 16 open reading frame 95##BC015536|C16orf95|100506581|chromosome 16 open reading frame 95##AK026130|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195124|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195125|C16orf95|100506581|chromosome 16 open reading frame 95##AY736035|FBXO31|79791|F-box protein 31##AF428140|FBXO31|79791|F-box protein 31##BC012748|FBXO31|79791|F-box protein 31##BC002985|FBXO31|79791|F-box protein 31##NM_024735|FBXO31|79791|F-box protein 31	0.037755	
chr19	52281219	52281366	reg1014568.p1	9.002	+	X63819 NM_001462	-14652	+	NM_001005738 M88107 D10922 AK290557	-16834	+	M60626 S49810 M60627 BC005315 NM_001193306 NM_002029 AK314935	-26162	-	AK123030 AK292541 NM_002030 BC059388	17120	+	BC035367 BC030610 TSC_hg19_v1_chr19_-_52391198 AK291812 AL832871 NM_001135590 BC004992 AK093036 AK289479 AX747873 NM_032679	109869	-	AK000909 AL713677 AK225480 BC005368 AK315487 NM_023074	126980	-	X63819|FPR2|2358|formyl peptide receptor 2##NM_001462|FPR2|2358|formyl peptide receptor 2##NM_001005738|FPR2|2358|formyl peptide receptor 2##M88107|FPR2|2358|formyl peptide receptor 2##D10922|FPR2|2358|formyl peptide receptor 2##AK290557|FPR2|2358|formyl peptide receptor 2##M60626|FPR1|2357|formyl peptide receptor 1##S49810|FPR1|2357|formyl peptide receptor 1##M60627|FPR1|2357|formyl peptide receptor 1##BC005315|FPR1|2357|formyl peptide receptor 1##NM_001193306|FPR1|2357|formyl peptide receptor 1##NM_002029|FPR1|2357|formyl peptide receptor 1##AK314935|FPR1|2357|formyl peptide receptor 1##AK123030|FPR3|2359|formyl peptide receptor 3##AK292541|FPR3|2359|formyl peptide receptor 3##NM_002030|FPR3|2359|formyl peptide receptor 3##BC059388|FPR3|2359|formyl peptide receptor 3##BC035367|ZNF577|84765|zinc finger protein 577##BC030610|ZNF577|84765|zinc finger protein 577##AK291812|ZNF577|84765|zinc finger protein 577##AL832871|ZNF577|84765|zinc finger protein 577##NM_001135590|ZNF577|84765|zinc finger protein 577##BC004992|ZNF577|84765|zinc finger protein 577##AK093036|ZNF577|84765|zinc finger protein 577##AK289479|ZNF577|84765|zinc finger protein 577##NM_032679|ZNF577|84765|zinc finger protein 577##AK000909|ZNF649|65251|zinc finger protein 649##AL713677|ZNF649|65251|zinc finger protein 649##AK225480|ZNF649|65251|zinc finger protein 649##BC005368|ZNF649|65251|zinc finger protein 649##AK315487|ZNF649|65251|zinc finger protein 649##NM_023074|ZNF649|65251|zinc finger protein 649	0.981337	CTCF.p2:6:0.981
chr4	73568075	73568205	reg1013485.p2	9.002	+	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	-133649	-	AK290937 NM_001144756 NM_053036 AF236083	-663270	+	AF119815 NM_004885 AK308069 AJ311393	-670571	+	BC101684 BC143642 TSC_hg19_v1_chr4_-_73935431 AK096310 AY957564 AY957565 BC071812 NM_173827	367303	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	520639	-	TSC_hg19_v1_chr4_-_74124365 AB527094	556219	-	AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AK290937|NPFFR2|10886|neuropeptide FF receptor 2##NM_001144756|NPFFR2|10886|neuropeptide FF receptor 2##NM_053036|NPFFR2|10886|neuropeptide FF receptor 2##AF236083|NPFFR2|10886|neuropeptide FF receptor 2##AF119815|NPFFR2|10886|neuropeptide FF receptor 2##NM_004885|NPFFR2|10886|neuropeptide FF receptor 2##AK308069|NPFFR2|10886|neuropeptide FF receptor 2##AJ311393|NPFFR2|10886|neuropeptide FF receptor 2##BC101684|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC143642|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK096310|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957564|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957565|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC071812|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_173827|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17	0.940347	CTCF.p2:-11:0.940
chr5	77763714	77763827	reg1014142.p1	9.002	+	NM_004866 TSC_hg19_v1_chr5_+_77656440 AF038966 AK304452 AK225172 BC009787 BC015065 AK298146 BC034048 AK290225 CR542286 CU677209	-107354	+	TSC_hg19_v1_chr5_-_77656217 AK129849	-107555	-	BC039455 TSC_hg19_v1_chr5_-_77656182	-107589	-	D86961 BC136335 BC136336 AY309920 TSC_hg19_v1_chr5_-_77806179	42284	-	TSC_hg19_v1_chr5_-_77806191 AK125227	42426	-	CR936660 TSC_hg19_v1_chr5_-_77845052	81253	-	NM_004866|SCAMP1|9522|secretory carrier membrane protein 1##AF038966|SCAMP1|9522|secretory carrier membrane protein 1##AK304452|SCAMP1|9522|secretory carrier membrane protein 1##AK225172|SCAMP1|9522|secretory carrier membrane protein 1##BC009787|SCAMP1|9522|secretory carrier membrane protein 1##BC015065|SCAMP1|9522|secretory carrier membrane protein 1##AK298146|SCAMP1|9522|secretory carrier membrane protein 1##BC034048|SCAMP1|9522|secretory carrier membrane protein 1##AK290225|SCAMP1|9522|secretory carrier membrane protein 1##CR542286|SCAMP1|9522|secretory carrier membrane protein 1##AK129849|LOC728769|728769|uncharacterized LOC728769##D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	0.205631	CTCF.p2:-6:0.206
chr16	50781604	50781719	reg1013872.p2	9.001	+	TSC_hg19_v1_chr16_+_50776066 AF161542 NM_001042412 BC012342	-5603	+	NM_001042355 NM_015247 TSC_hg19_v1_chr16_+_50775996 AK292975 AK225202 AJ250014 AK310832 AK056226	-5677	+	AF178930 AY187243 NM_022162 AY187244 AY187246 AB527390	-50560	+	AK307835 NM_001127892	402846	-	BC113881 BC113906 BC131548 Y18265 TSC_hg19_v1_chr16_-_51185251 AK295103 NM_002968	403751	-	NM_001242473	1326185	-	AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)##BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042355|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_015247|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK292975|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK225202|CYLD|1540|cylindromatosis (turban tumor syndrome)##AJ250014|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK310832|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK056226|CYLD|1540|cylindromatosis (turban tumor syndrome)##AF178930|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187243|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_022162|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187244|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187246|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AK307835|SALL1|6299|sal-like 1 (Drosophila)##NM_001127892|SALL1|6299|sal-like 1 (Drosophila)##BC113881|SALL1|6299|sal-like 1 (Drosophila)##BC113906|SALL1|6299|sal-like 1 (Drosophila)##BC131548|SALL1|6299|sal-like 1 (Drosophila)##Y18265|SALL1|6299|sal-like 1 (Drosophila)##AK295103|SALL1|6299|sal-like 1 (Drosophila)##NM_002968|SALL1|6299|sal-like 1 (Drosophila)##NM_001242473|LOC388276|388276|hCG2045437	0.837258	CTCF.p2:11:0.837
chr4	44929515	44929652	reg1016313.p1	9.001	+	TSC_hg19_v1_chr4_-_44728574 AK296051 AB209904 AK055639 AY173948 AK129655 AK308920 AF247786 NM_138335	-201019	-	TSC_hg19_v1_chr4_+_44680469 NM_021927 BX647242 BC036768 BC012338 AK225314 AK023282 AK308667	-249123	+	AK096895 BC103995 BC103996 NM_182592	-275926	-	CU689108 DQ890976 DQ894150 CR933628 BC031087 AK289806 AK299884 BX648937 NM_173536 AK122845	1196430	-	TSC_hg19_v1_chr4_-_46391400 AK125179 NM_001114175	1461816	-	TSC_hg19_v1_chr4_-_46391484 AK307128	1461930	-	AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_021927|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BX647242|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC036768|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC012338|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK225314|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK023282|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK308667|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7##DQ890976|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##DQ894150|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##CR933628|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BC031087|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK289806|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK299884|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BX648937|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##NM_173536|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK122845|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK125179|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_001114175|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK307128|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2	0.994958	CTCF.p2:0:0.995
chr1	177150922	177151065	reg1014339.p2	9.000	+	AB051534 AB161694 BC028036 NM_021165	-10412	+	AK296524 TSC_hg19_v1_chr1_+_177140093	-10915	+	TSC_hg19_v1_chr1_-_177134042 AK309094	-16918	-	AB063357 NM_033127 TSC_hg19_v1_chr1_-_177939202	788133	-	BC009106 TSC_hg19_v1_chr1_-_177939393	788377	-	TSC_hg19_v1_chr1_-_178007060 AK092831 BX538051 AB067515	856106	-	AB051534|FAM5B|57795|family with sequence similarity 5, member B##AB161694|FAM5B|57795|family with sequence similarity 5, member B##BC028036|FAM5B|57795|family with sequence similarity 5, member B##NM_021165|FAM5B|57795|family with sequence similarity 5, member B##AK296524|FAM5B|57795|family with sequence similarity 5, member B##AK309094|ASTN1|460|astrotactin 1##AB063357|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##NM_033127|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##BC009106|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AK092831|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##BX538051|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene	0.191853	
chr14	30739998	30740130	reg1016001.p1	9.000	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	-343210	-	TSC_hg19_v1_chr14_+_29241992 BX248251	-1498069	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-1503151	+	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	288296	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	351460	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	351480	+	AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1	0.883058	CTCF.p2:7:0.883
chr2	43836558	43836723	reg1014205.p1	9.000	+	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	-13492	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	-382898	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-382910	-	TSC_hg19_v1_chr2_+_43864411 BC063310	27773	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	27799	+	NM_001101330	66820	-	AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_001101330|LOC728819|728819|hCG1645220	0.999519	CTCF.p2:1:1.000
chr5	131146735	131146875	reg1014196.p2	9.000	+	TSC_hg19_v1_chr5_-_131132740 NM_001008738 NM_133372	-14070	-	AK292473 TSC_hg19_v1_chr5_-_131132711	-14094	-	TSC_hg19_v1_chr5_-_131132694 BC001956	-14106	-	AB385389 AB020644 TSC_hg19_v1_chr5_-_131347331 AK294291 NM_001009185 NM_001205247 NM_015256	200496	-	AK314452 BC047453 NM_001205248 NM_001205251 BC026161 NM_001205250 DQ655980	200888	-	M20137 NM_000588 BC069472 BC066272 BC066273 BC066274 BC066275 BC066276 M17115 M14743 CU686832 HQ448457	249567	+	NM_001008738|FNIP1|96459|folliculin interacting protein 1##NM_133372|FNIP1|96459|folliculin interacting protein 1##AK292473|FNIP1|96459|folliculin interacting protein 1##BC001956|FNIP1|96459|folliculin interacting protein 1##AB020644|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##AK294291|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001009185|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205247|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_015256|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##AK314452|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC047453|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205248|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205251|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC026161|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205250|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##DQ655980|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##M20137|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##NM_000588|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC069472|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066272|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066273|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066274|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066275|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066276|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M17115|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M14743|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##HQ448457|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)	0.983523	CTCF.p2:-13:0.984
chr22	20918699	20918816	reg1013712.p1	8.999	+	BC017110 TSC_hg19_v1_chr22_+_20909388	-9450	+	AB463109 CU013137 CU013425 AF328769 TSC_hg19_v1_chr22_+_20861965	-56793	+	TSC_hg19_v1_chr22_+_20861902 AK297789 BC003078 BC013985 CR456537	-56839	+	TSC_hg19_v1_chr22_+_20918811 U80745	67	+	L36151 NM_002650	170197	-	TSC_hg19_v1_chr22_+_21128411 NM_000185 AK314200 AK225292 BC035028	209639	+	BC017110|MED15|51586|mediator complex subunit 15##CU013137|MED15|51586|mediator complex subunit 15##CU013425|MED15|51586|mediator complex subunit 15##AF328769|MED15|51586|mediator complex subunit 15##AK297789|MED15|51586|mediator complex subunit 15##BC003078|MED15|51586|mediator complex subunit 15##BC013985|MED15|51586|mediator complex subunit 15##CR456537|MED15|51586|mediator complex subunit 15##U80745|MED15|51586|mediator complex subunit 15##L36151|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_002650|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_000185|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK314200|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK225292|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##BC035028|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1	1.008713	CTCF.p2:-1:0.995
chr3	105088713	105088859	reg1014470.p2	8.999	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-2964	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	-3206	+	AY090780 NM_175056 BC143817	-2934919	+	CR749655 TSC_hg19_v1_chr3_-_105421064	332268	-	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	499021	-	TSC_hg19_v1_chr3_-_106959482 BC036229	1870693	-	AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.0	
chr4	18691093	18691216	reg1013296.p1	8.999	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-667688	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-878543	+	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	-878881	-	AB017168 NM_004787 BC117190 BC143978 AF133270	1564182	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	2010913	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	2294475	-	AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16##AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4	0.837795	CTCF.p2:-20:0.838
chr3	17472581	17472741	reg1016371.p1	8.998	+	BC036392 NM_015184	-498080	+	AB029015 NM_001144382	-546210	+	U65918 U66726 U66078 BC027595 NM_001351	-825695	-	AK310539 NM_001134381	268850	-	D86965 NM_014744	309737	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	311506	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.018439	
chr12	125383126	125383243	reg1011351.p1	8.997	+	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	-34711	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	-34807	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	-34879	-	AY732488 AY819759 BC008955 BC080583 AB209782 BC000449 AK056939 AK098827 AK129749 AK291539 BC039193 BC093445 AB009010 TSC_hg19_v1_chr12_-_125399197 AK026846	15989	-	NM_021009	16402	-	TSC_hg19_v1_chr12_-_125473644 BC037964 NM_032656	90460	-	NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AY732488|UBC|7316|ubiquitin C##AY819759|UBC|7316|ubiquitin C##BC008955|UBC|7316|ubiquitin C##BC080583|UBC|7316|ubiquitin C##AB209782|UBC|7316|ubiquitin C##BC000449|UBC|7316|ubiquitin C##AK056939|UBC|7316|ubiquitin C##AK098827|UBC|7316|ubiquitin C##AK129749|UBC|7316|ubiquitin C##AK291539|UBC|7316|ubiquitin C##BC039193|UBC|7316|ubiquitin C##BC093445|UBC|7316|ubiquitin C##AB009010|UBC|7316|ubiquitin C##AK026846|UBC|7316|ubiquitin C##NM_021009|UBC|7316|ubiquitin C##BC037964|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37##NM_032656|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37	1.012558	CTCF.p2:31:0.251	CTCF.p2:-48:0.762
chr4	54572739	54572863	reg1013907.p1	8.997	+	AK056823 NM_001126328 TSC_hg19_v1_chr4_-_54457761	-115057	-	BC022983 TSC_hg19_v1_chr4_-_54457654	-115158	-	TSC_hg19_v1_chr4_-_54424402 NM_032622	-148383	-	AB463552 DQ890711 DQ893893 TSC_hg19_v1_chr4_-_54930576	357725	-	TSC_hg19_v1_chr4_-_54930764 AF159423 BC034691	357934	-	TSC_hg19_v1_chr4_-_54930773 AK312427 NM_012110	357996	-	AK056823|LNX1|84708|ligand of numb-protein X 1##NM_001126328|LNX1|84708|ligand of numb-protein X 1##BC022983|LNX1|84708|ligand of numb-protein X 1##NM_032622|LNX1|84708|ligand of numb-protein X 1##DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2##DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2##AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2##BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2##AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	0.881448	CTCF.p2:-16:0.881
chr11	11044072	11044162	reg1011478.p2	8.996	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-164331	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-164599	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-213320	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	599461	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	818899	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	819374	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.998878	CTCF.p2:-7:0.999
chr1	17077152	17077254	reg1015200.p1	8.996	+	AK123337 TSC_hg19_v1_chr1_-_16971178	-106026	-	TSC_hg19_v1_chr1_-_16971175 AK090414	-106037	-	TSC_hg19_v1_chr1_-_16940046 AK123260 AY894575 NM_017940 BC066930 BC010124 BC082236 BC110431 AK055895 BC093404	-137307	-	TSC_hg19_v1_chr1_+_17248425 NM_014675	171231	+	TSC_hg19_v1_chr1_-_17307116 BC028033 AK222751 BC015039 NM_001135248 NM_002403	229946	-	AK301655 NM_001135247 NM_017459	230873	-	AK123337|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK123260|NBPF1|55672|neuroblastoma breakpoint family, member 1##AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_017940|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC066930|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC010124|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC110431|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK055895|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC093404|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_014675|CROCC|9696|ciliary rootlet coiled-coil, rootletin##BC028033|MFAP2|4237|microfibrillar-associated protein 2##AK222751|MFAP2|4237|microfibrillar-associated protein 2##BC015039|MFAP2|4237|microfibrillar-associated protein 2##NM_001135248|MFAP2|4237|microfibrillar-associated protein 2##NM_002403|MFAP2|4237|microfibrillar-associated protein 2##AK301655|MFAP2|4237|microfibrillar-associated protein 2##NM_001135247|MFAP2|4237|microfibrillar-associated protein 2##NM_017459|MFAP2|4237|microfibrillar-associated protein 2	0.861032	CTCF.p2:0:0.861
chr2	178011971	178012085	reg1012693.p2	8.996	+	BC013438 TSC_hg19_v1_chr2_-_177502718	-509340	-	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-877789	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-958612	+	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	65446	+	AK311688 NM_001145412 NM_001145413	116543	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	117348	-	BC013438|LOC375295|375295|uncharacterized LOC375295##NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.019569	
chr9	103997896	103998025	reg1014247.p1	8.996	+	AK000307 AK225306 BC029380 NM_017753 TSC_hg19_v1_chr9_+_103947336	-50634	+	NM_207299 AK303807 TSC_hg19_v1_chr9_+_103791087	-206894	+	NM_001018116 AK300099 TSC_hg19_v1_chr9_+_103340380 EU487253 BC090888	-657571	+	NM_001127610 AK315347	147862	-	L34081 BC039200 BC009567 NM_001701 BC107424	149315	-	TSC_hg19_v1_chr9_-_104160901 BC032008 AK295521 AK000500 AK025643 NM_019051	162937	-	AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_207299|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK303807|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_001018116|MURC|347273|muscle-related coiled-coil protein##AK300099|MURC|347273|muscle-related coiled-coil protein##EU487253|MURC|347273|muscle-related coiled-coil protein##BC090888|MURC|347273|muscle-related coiled-coil protein##NM_001127610|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##AK315347|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##L34081|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC039200|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC009567|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##NM_001701|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC107424|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC032008|MRPL50|54534|mitochondrial ribosomal protein L50##AK000500|MRPL50|54534|mitochondrial ribosomal protein L50##NM_019051|MRPL50|54534|mitochondrial ribosomal protein L50	0.80472	CTCF.p2:19:0.805
chr11	104817751	104817904	reg1017093.p1	8.995	+	AF464191 AF464192 AF464193 AF464194 AF464195 AF486844 AF486845 AF486846 AF486847 NM_001191016	-48431	-	TSC_hg19_v1_chr11_-_104035100 BC030645	-782727	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	-782787	-	NM_033306 U28977 U28978	9594	-	TSC_hg19_v1_chr11_-_104839279 U28979 BC008060 U28976 BC017839 U28014 AK225751 Z48810 U25804 AK296081 AK304222 NM_001225	21470	-	AK296660 NM_001136109 NM_001136110 NM_001136112 NM_004347	76067	-	AF464191|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464192|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464193|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464194|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464195|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486844|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486845|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486846|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486847|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_001191016|CASP12|100506742|caspase 12 (gene/pseudogene)##BC030645|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D##NM_033306|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28977|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28978|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28979|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC008060|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28976|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC017839|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28014|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK225751|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##Z48810|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U25804|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK296081|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK304222|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##NM_001225|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK296660|CASP5|838|caspase 5, apoptosis-related cysteine peptidase##NM_001136109|CASP5|838|caspase 5, apoptosis-related cysteine peptidase##NM_001136110|CASP5|838|caspase 5, apoptosis-related cysteine peptidase##NM_001136112|CASP5|838|caspase 5, apoptosis-related cysteine peptidase##NM_004347|CASP5|838|caspase 5, apoptosis-related cysteine peptidase	0.991797	CTCF.p2:2:0.992
chr12	10653756	10653893	reg1016114.p1	8.995	+	BC012550 NM_213657 NM_213658 AK310992	-46576	-	X54867 X54868 AF461812 NM_002259 NM_007328	-47871	-	BC106069 AK295525 AF260134 AF350017 NM_002260 X54869 Y13055 AF461157 BC093644 BC112039	-65245	-	AB528590 TSC_hg19_v1_chr12_-_10766200 BC010905 AK022720 AK001154 BC000928 AK096106 AF165518 NM_018048	112345	-	AF251059 NM_018423	173066	-	TSC_hg19_v1_chr12_-_10875782 AB463536 DQ892686 DQ895930	221918	-	BC012550|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_213657|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_213658|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##AK310992|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##X54867|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##X54868|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##AF461812|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_002259|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_007328|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##BC010905|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK022720|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK001154|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK096106|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AF165518|MAGOHB|55110|mago-nashi homolog B (Drosophila)##NM_018048|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AF251059|STYK1|55359|serine/threonine/tyrosine kinase 1##NM_018423|STYK1|55359|serine/threonine/tyrosine kinase 1##DQ892686|CSDA|8531|cold shock domain protein A##DQ895930|CSDA|8531|cold shock domain protein A	0.134065	
chr5	131526032	131526164	reg1015422.p1	8.995	+	M11220 NM_000758 BC113924 BC113999 BC108724 M11734 M10663 AY720441 AB591004 AF510855	-116573	+	M20137 NM_000588 BC069472 BC066272 BC066273 BC066274 BC066275 BC066276 M17115 M14743 CU686832 HQ448457	-129726	+	AK314452 BC047453 NM_001205248 NM_001205251 BC026161 NM_001205250 DQ655980	-178405	-	NM_001017973 NM_004199 BC017062	36845	-	TSC_hg19_v1_chr5_-_131563545 AY358970 BC025960 BC035813 BX647924 NM_001017974 NM_001142598 NM_001142599	37420	-	TSC_hg19_v1_chr5_+_131593340 BC016765 NM_001131027 NM_003687 AF154335	67255	+	M11220|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_000758|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113924|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113999|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC108724|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M11734|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M10663|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AY720441|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AF510855|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M20137|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##NM_000588|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC069472|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066272|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066273|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066274|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066275|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066276|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M17115|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M14743|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##HQ448457|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##AK314452|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC047453|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205248|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205251|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC026161|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205250|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##DQ655980|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001017973|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_004199|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC017062|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##AY358970|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC025960|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC035813|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BX647924|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001017974|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142598|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142599|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC016765|PDLIM4|8572|PDZ and LIM domain 4##NM_001131027|PDLIM4|8572|PDZ and LIM domain 4##NM_003687|PDLIM4|8572|PDZ and LIM domain 4##AF154335|PDLIM4|8572|PDZ and LIM domain 4	0.243088	CTCF.p2:1:0.243
chr11	58335502	58335632	reg1013131.p1	8.994	+	NM_001005218	-59990	-	BC136947 BC136948 NM_001004733	-127922	-	BC136923 BC136922 NM_001005566	-144784	-	BC007490 BC019035 TSC_hg19_v1_chr11_-_58343330 AK313306 AK223165 AK301093 AF062075 NM_004811	7781	-	BC034230 TSC_hg19_v1_chr11_-_58345666 AK300955 NM_001143995 AK299264	10094	-	TSC_hg19_v1_chr11_+_58346591 BC051743 NM_001197051 NM_053023	11016	+	NM_001005218|OR5B21|219968|olfactory receptor, family 5, subfamily B, member 21##BC136947|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12##BC136948|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12##NM_001004733|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12##BC136923|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2##BC136922|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2##NM_001005566|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2##BC007490|LPXN|9404|leupaxin##BC019035|LPXN|9404|leupaxin##AK313306|LPXN|9404|leupaxin##AK223165|LPXN|9404|leupaxin##AK301093|LPXN|9404|leupaxin##AF062075|LPXN|9404|leupaxin##NM_004811|LPXN|9404|leupaxin##BC034230|LPXN|9404|leupaxin##AK300955|LPXN|9404|leupaxin##NM_001143995|LPXN|9404|leupaxin##AK299264|LPXN|9404|leupaxin##BC051743|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_001197051|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_053023|ZFP91|80829|zinc finger protein 91 homolog (mouse)	1.217362	CTCF.p2:-12:0.250	CTCF.p2:22:0.967
chr12	122106710	122106814	reg1013318.p2	8.994	+	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	-42119	+	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	-87848	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	-88503	-	BC057760 NM_173855	797	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	43982	+	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	124812	-	BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B##AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)	1.042232	CTCF.p2:4:0.995
chr14	80522684	80522793	reg1015589.p1	8.994	+	NM_001105250 NM_138970 AK056530 BC059368 BC068469	-777034	+	AB018286 BC152457 NM_004796	-1652646	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-2256288	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	155166	-	AK292210 NM_000793	174658	-	NM_152446	883145	-	NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II##NM_152446|CEP128|145508|centrosomal protein 128kDa	0.493693	CTCF.p2:-6:0.494
chr17	62923832	62923935	reg1012684.p2	8.994	+	TSC_hg19_v1_chr17_-_62915587 AK294371	-8287	-	AB011135 NM_199340	-8981	-	AB384498 TSC_hg19_v1_chr17_-_62893379 BC043145 BC048966	-30492	-	TSC_hg19_v1_chr17_-_62971685 BX537538 AK056627 BC063466 AK311317	47737	-	TSC_hg19_v1_chr17_-_63009302 AK026902	85423	-	TSC_hg19_v1_chr17_-_63052724 AB528470 AF493902 CU691408 DQ893572 DQ894448 AK313672	128835	-	AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3##NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC043145|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC048966|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BX537538|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK056627|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##BC063466|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK311317|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AF493902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ893572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ894448|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AK313672|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	0.841468	CTCF.p2:-11:0.841
chr5	135165898	135166026	reg1014151.p1	8.994	+	NM_004887	-250994	-	AF086340 AF073957 AF144103 BT007080 AB528117 AM392840 AF106911 BC003513 AY358906 TSC_hg19_v1_chr5_-_134914682 AB543622 AK075514	-251389	-	BC008687 BC028226 NM_006161 TSC_hg19_v1_chr5_-_134871655 AB593107 AK314280	-294316	-	AK126812 NM_145282 BC025747	4427	+	CU688130 BC066283 BC066284 BC066285 BC066286 BC066287 M30134 NM_000590 S63356 X17543	65547	-	TSC_hg19_v1_chr5_+_135266044 NM_012159 BC044938	100078	+	NM_004887|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF086340|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF073957|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF144103|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BT007080|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AM392840|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF106911|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BC003513|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AY358906|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AB543622|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AK075514|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BC008687|NEUROG1|4762|neurogenin 1##BC028226|NEUROG1|4762|neurogenin 1##NM_006161|NEUROG1|4762|neurogenin 1##AB593107|NEUROG1|4762|neurogenin 1##AK126812|SLC25A48|153328|solute carrier family 25, member 48##NM_145282|SLC25A48|153328|solute carrier family 25, member 48##BC025747|SLC25A48|153328|solute carrier family 25, member 48##BC066283|IL9|3578|interleukin 9##BC066284|IL9|3578|interleukin 9##BC066285|IL9|3578|interleukin 9##BC066286|IL9|3578|interleukin 9##BC066287|IL9|3578|interleukin 9##M30134|IL9|3578|interleukin 9##NM_000590|IL9|3578|interleukin 9##S63356|IL9|3578|interleukin 9##X17543|IL9|3578|interleukin 9##NM_012159|FBXL21|26223|F-box and leucine-rich repeat protein 21 (gene/pseudogene)##BC044938|FBXL21|26223|F-box and leucine-rich repeat protein 21 (gene/pseudogene)	0.970991	CTCF.p2:9:0.971
chr18	60305772	60305889	reg1013652.p2	8.993	+	NM_017742 TSC_hg19_v1_chr18_+_60190696 BC006340	-115076	+	AB209762 AF018253 NM_003839 AB527346	-313280	+	TSC_hg19_v1_chr18_+_59855176 AB384606	-450620	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	76834	+	TSC_hg19_v1_chr18_+_60383911 AB011178	78096	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	78478	+	NM_017742|ZCCHC2|54877|zinc finger, CCHC domain containing 2##BC006340|ZCCHC2|54877|zinc finger, CCHC domain containing 2##AB209762|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##AF018253|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_003839|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1	0.998389	CTCF.p2:-5:0.998
chr18	67304265	67304398	reg1017160.p1	8.993	+	TSC_hg19_v1_chr18_+_67068214 NM_152721 AY599248 BC096744	-236101	+	NM_024781 CR749520	-838989	+	NM_001093729 AK308114 AK091108	-921812	+	AK313199 TSC_hg19_v1_chr18_-_67615110	310768	-	GU935335 GU935336 U56102 NM_006566	319864	-	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	568607	-	NM_152721|DOK6|220164|docking protein 6##AY599248|DOK6|220164|docking protein 6##BC096744|DOK6|220164|docking protein 6##NM_024781|CCDC102B|79839|coiled-coil domain containing 102B##CR749520|CCDC102B|79839|coiled-coil domain containing 102B##NM_001093729|CCDC102B|79839|coiled-coil domain containing 102B##AK308114|CCDC102B|79839|coiled-coil domain containing 102B##AK091108|CCDC102B|79839|coiled-coil domain containing 102B##AK313199|CD226|10666|CD226 molecule##GU935335|CD226|10666|CD226 molecule##GU935336|CD226|10666|CD226 molecule##U56102|CD226|10666|CD226 molecule##NM_006566|CD226|10666|CD226 molecule##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin	0.0	
chr9	79782407	79782530	reg1015339.p1	8.993	+	NM_001013735	-147898	+	AB535152 FJ808772 FJ808773 BC019095 NM_015225 TSC_hg19_v1_chr9_-_79521026	-261516	-	AY196297 NM_001097636	-666920	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	9871	+	TSC_hg19_v1_chr9_+_79792474 AB054005	10040	+	AK027023 TSC_hg19_v1_chr9_+_79968352	185880	+	NM_001013735|FOXB2|442425|forkhead box B2##AB535152|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808772|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808773|PRUNE2|158471|prune homolog 2 (Drosophila)##BC019095|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_015225|PRUNE2|158471|prune homolog 2 (Drosophila)##AY196297|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097636|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)	0.988693	CTCF.p2:1:0.989
chr13	66212833	66212936	reg1011774.p1	8.992	+	AK289924 NM_022843	-4223230	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-4223631	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-5241405	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	1591620	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	4469657	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	6227375	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.24329	CTCF.p2:24:0.243
chr5	102376912	102377035	reg1014957.p1	8.992	+	M37721 TSC_hg19_v1_chr5_+_102201730 AK296521 AK290158 S75037 S75038 AB527419 AB095007 BT007419	-175167	+	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	-175443	+	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	-542340	-	BC151135 BC157835 BC015325 CR627424 AK295796 AK225572 AK000132 NM_017676 TSC_hg19_v1_chr5_-_102455843	78840	-	AK310544 AB007893 TSC_hg19_v1_chr5_+_102456004	79008	+	TSC_hg19_v1_chr5_+_102456089 AK294787	79085	+	M37721|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK296521|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK290158|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75037|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75038|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AB095007|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BT007419|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC151135|GIN1|54826|gypsy retrotransposon integrase 1##BC157835|GIN1|54826|gypsy retrotransposon integrase 1##BC015325|GIN1|54826|gypsy retrotransposon integrase 1##CR627424|GIN1|54826|gypsy retrotransposon integrase 1##AK295796|GIN1|54826|gypsy retrotransposon integrase 1##AK225572|GIN1|54826|gypsy retrotransposon integrase 1##AK000132|GIN1|54826|gypsy retrotransposon integrase 1##NM_017676|GIN1|54826|gypsy retrotransposon integrase 1##AB007893|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK294787|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2	0.987661	CTCF.p2:3:0.988
chr7	49041244	49041379	reg1014127.p1	8.992	+	AK126220 AY204751 BX647273 NM_152701	-830256	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-912356	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	-912511	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	771959	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	1091513	-	NM_001161834	1094370	+	AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72	0.873196	CTCF.p2:-5:0.873
chr5	106907836	106907955	reg1012836.p1	8.991	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-4009414	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4313438	+	BC024591 NM_015216 AB463068	-4442621	+	AK308672 NM_001962 U26403	98695	-	TSC_hg19_v1_chr5_-_107717106 AK126722	809235	-	BC063316 NM_001163315	809903	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.984068	CTCF.p2:1:0.984
chr5	58484375	58484530	reg1014298.p1	8.991	+	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	-149074	-	BC036319 NM_001197223	-188694	-	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	-605533	+	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	87478	-	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	168291	-	U50159 NM_006203 L20970	397847	-	U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.999657	CTCF.p2:-6:1.000
chr8	72917517	72917667	reg1012802.p2	8.991	+	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-160884	-	AF060154 TSC_hg19_v1_chr8_-_72756646	-160964	-	TSC_hg19_v1_chr8_-_72756449 AF087036 AB463900 BT007169	-161153	-	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	70242	-	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	532051	+	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	1003520	+	AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##AF060154|MSC|9242|musculin##AF087036|MSC|9242|musculin##BT007169|MSC|9242|musculin##NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1	0.926026	CTCF.p2:-7:0.804
chr10	17641225	17641337	reg1015130.p2	8.990	+	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	-144916	-	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	-145067	-	TSC_hg19_v1_chr10_-_17271978 BC078172	-369295	-	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	18092	-	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	44949	+	NM_001098844 BC157856	152973	+	BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236	0.0	
chr2	103065964	103066094	reg1014636.p1	8.990	+	AK300026 AF077346 NM_003853	-30829	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	-86921	+	BC012580 BC030975 NM_003856 AK291578 AB029084	-112298	+	CR627411 NM_001011552	23732	+	BC136377 BC136378 BC035787 NM_003048 AF073299	170154	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	287304	-	AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein##AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein##NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1##BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##CR627411|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##NM_001011552|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##BC136377|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC136378|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC035787|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##NM_003048|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AF073299|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9	0.996583	CTCF.p2:8:0.997
chr6	20404918	20405061	reg1016400.p1	8.990	+	CR749285 NM_001243076	-956	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-2886	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	-192317	-	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	129734	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	1189383	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	1261670	+	CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340	0.476495	CTCF.p2:-5:0.476
chr11	118223946	118224081	reg1013799.p1	8.989	+	AK299997 NM_000073 AK313966 AK315895 AK310622 BC069685 X04145 X60492 AK223314 AK310578 BC113830	-8929	+	JN392069 BC039035 AK311971 TSC_hg19_v1_chr11_-_118213368 BC070321 NM_000732 NM_001040651	-10624	-	NM_000733 AK301255 AK311641 AK292612 BC033578 BC049847 X03884 CU690624	-48533	+	TSC_hg19_v1_chr11_+_118230314 NM_001204077 NM_004788 BC112367	6292	+	BC062695 TSC_hg19_v1_chr11_+_118230319	6306	+	TSC_hg19_v1_chr11_+_118230324 BC111417 BC052643 BC010938	6319	+	NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##BC039035|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##AK311971|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##BC070321|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##NM_000732|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##NM_001040651|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##NM_001204077|UBE4A|9354|ubiquitination factor E4A##NM_004788|UBE4A|9354|ubiquitination factor E4A##BC112367|UBE4A|9354|ubiquitination factor E4A##BC062695|UBE4A|9354|ubiquitination factor E4A##BC111417|UBE4A|9354|ubiquitination factor E4A##BC052643|UBE4A|9354|ubiquitination factor E4A##BC010938|UBE4A|9354|ubiquitination factor E4A	0.298296	CTCF.p2:22:0.298
chr4	3944286	3944403	reg1014191.p1	8.989	+	J03853 NM_000683	-176049	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-176226	+	TSC_hg19_v1_chr4_-_3534154 BC105074 BC112067 AK292321 NM_002337	-410156	-	BC044637 TSC_hg19_v1_chr4_-_3957162	12811	-	BC130430 BC130432 NM_177998	284273	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	305604	-	J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC105074|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC112067|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK292321|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##NM_002337|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128	0.739997	CTCF.p2:0:0.581
chr14	70784695	70784846	reg1014812.p2	8.988	+	BC036783 BX248763 TSC_hg19_v1_chr14_-_70655669 AF510501 AF510502 AF510503 NM_033262 NM_058240 NM_182932 NM_183002	-129083	-	AK096553 AJ745101 AJ745102 BC114217 NM_182936 AK122728 BC142969 NM_001130417	-237878	-	NM_001034852 NM_022137 TSC_hg19_v1_chr14_+_70346132 AK289988 AK313063 AJ249900 BC011548 BC008608	-438641	+	CR457199 AB528661 CU674840 BC001702 TSC_hg19_v1_chr14_-_70826389	41576	-	AF151037 AK290743 TSC_hg19_v1_chr14_-_70826395 AX810696 FJ460510 FJ460511 NM_001204090 NM_016468	41650	-	AB527912 TSC_hg19_v1_chr14_-_70883770 BC007704 AK002133 AK311719 NM_001202547 NM_001202548 NM_001202549 NM_018373	98986	-	BC036783|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BX248763|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510501|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510502|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510503|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_033262|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_058240|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182932|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_183002|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AK096553|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745101|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745102|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC114217|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182936|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AK122728|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC142969|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_001130417|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_001034852|SMOC1|64093|SPARC related modular calcium binding 1##NM_022137|SMOC1|64093|SPARC related modular calcium binding 1##AK289988|SMOC1|64093|SPARC related modular calcium binding 1##AK313063|SMOC1|64093|SPARC related modular calcium binding 1##AJ249900|SMOC1|64093|SPARC related modular calcium binding 1##BC011548|SMOC1|64093|SPARC related modular calcium binding 1##BC008608|SMOC1|64093|SPARC related modular calcium binding 1##CR457199|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC001702|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##AF151037|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK290743|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##FJ460510|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##FJ460511|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_001204090|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_016468|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC007704|SYNJ2BP|55333|synaptojanin 2 binding protein##AK002133|SYNJ2BP|55333|synaptojanin 2 binding protein##AK311719|SYNJ2BP|55333|synaptojanin 2 binding protein##NM_001202547|SYNJ2BP-COX16|100529257|SYNJ2BP-COX16 readthrough##NM_001202548|SYNJ2BP-COX16|100529257|SYNJ2BP-COX16 readthrough##NM_001202549|SYNJ2BP-COX16|100529257|SYNJ2BP-COX16 readthrough##NM_018373|SYNJ2BP|55333|synaptojanin 2 binding protein	0.456157	CTCF.p2:0:0.445
chr15	99645063	99645220	reg1017024.p1	8.987	+	AK058162 NM_001167902	-94118	-	BC104743 BC104744 BC105686 NM_001102612	-96304	-	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-452385	+	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	99	+	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	144565	-	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	146275	-	AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23	0.158168	
chr2	91672057	91672188	reg1014407.p1	8.987	+	TSC_hg19_v1_chr2_+_90211706 Z69013	-1460404	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-1594368	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-2052269	-	TSC_hg19_v1_chr2_-_91847997 BC030764	175881	-	AK097438 BC021716 NM_144705 AK296678 CU692394	3865128	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	4019360	+	BC070334|IGKC|3514|immunoglobulin kappa constant##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein	0.829185	CTCF.p2:-28:0.829
chr3	25938653	25938756	reg1014006.p2	8.987	+	TSC_hg19_v1_chr3_+_25831590 NM_001145391 NM_017897 AK000611 AK304821 AK225260 BC008202	-107124	+	AK296047 NM_001145294	-107192	-	TSC_hg19_v1_chr3_-_25824955 NM_001145293 NM_001145295 NM_018297	-113734	-	BC067784 TSC_hg19_v1_chr3_+_26664296 AF396933 NM_052953	725596	+	TSC_hg19_v1_chr3_-_27410884 AK123061 NM_199347	1472209	-	AF047033 AF089726 NM_003615	1559540	-	NM_001145391|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##NM_017897|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK000611|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK304821|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK225260|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##BC008202|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK296047|NGLY1|55768|N-glycanase 1##NM_001145294|NGLY1|55768|N-glycanase 1##NM_001145293|NGLY1|55768|N-glycanase 1##NM_001145295|NGLY1|55768|N-glycanase 1##NM_018297|NGLY1|55768|N-glycanase 1##BC067784|LRRC3B|116135|leucine rich repeat containing 3B##AF396933|LRRC3B|116135|leucine rich repeat containing 3B##NM_052953|LRRC3B|116135|leucine rich repeat containing 3B##AK123061|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##NM_199347|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7	0.54698	CTCF.p2:8:0.547
chr5	59973648	59973826	reg1014909.p1	8.987	+	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	-189697	+	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	-189833	-	NM_001104631	-784117	-	TSC_hg19_v1_chr5_-_59995928 AF490257	22179	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	22228	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	166334	-	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF490257|DEPDC1B|55789|DEP domain containing 1B##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7	0.982231	CTCF.p2:1:0.982
chr5	163902487	163902587	reg1013018.p1	8.986	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-969894	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-972249	+	NM_001142556 NM_001142557 NM_012484 NM_012485 BC057235 AK313603 BC030505 TSC_hg19_v1_chr5_+_162887665 AK302975 BC006984 AK303616 BC070281 BC017793 U29343 AF032862 BC108904 BC108905 BC107869 AK290577	-1014942	+	HE578282 HE578283 NM_001122679	2809305	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	3816284	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	4010937	+	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001142556|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001142557|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012484|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012485|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC057235|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK313603|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC030505|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK302975|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK303616|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC070281|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC017793|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##U29343|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AF032862|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108904|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108905|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC107869|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK290577|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.012084	
chr6	26175764	26175906	reg1015970.p1	8.986	+	TSC_hg19_v1_chr6_+_26158349 NM_021063 NM_138720 AK292712 BC002842 AJ223353 AB463734 BC096122	-17471	+	NM_005321 TSC_hg19_v1_chr6_+_26156558 BC096168 BC096169 BC096170 BC099632 EF065554 EF065555	-19237	+	TSC_hg19_v1_chr6_+_26156555 BC055095 AK313681	-19281	+	BC101748 BC101750 EU446967 NM_003523	8155	+	AB528805 BC128104 BC128105 BC143045 NM_003539 TSC_hg19_v1_chr6_-_26189339	13487	-	CU689152 DQ892795 DQ896042 AB590086 BC033095 TSC_hg19_v1_chr6_-_26197515	21661	-	NM_021063|HIST1H2BD|3017|histone cluster 1, H2bd##NM_138720|HIST1H2BD|3017|histone cluster 1, H2bd##AK292712|HIST1H2BD|3017|histone cluster 1, H2bd##BC002842|HIST1H2BD|3017|histone cluster 1, H2bd##AJ223353|HIST1H2BD|3017|histone cluster 1, H2bd##BC096122|HIST1H2BD|3017|histone cluster 1, H2bd##NM_005321|HIST1H1E|3008|histone cluster 1, H1e##BC096168|HIST1H1E|3008|histone cluster 1, H1e##BC096169|HIST1H1E|3008|histone cluster 1, H1e##BC096170|HIST1H1E|3008|histone cluster 1, H1e##BC099632|HIST1H1E|3008|histone cluster 1, H1e##EF065554|HIST1H1E|3008|histone cluster 1, H1e##EF065555|HIST1H1E|3008|histone cluster 1, H1e##AK313681|HIST1H1E|3008|histone cluster 1, H1e##BC101748|HIST1H2BE|8344|histone cluster 1, H2be##BC101750|HIST1H2BE|8344|histone cluster 1, H2be##EU446967|HIST1H2BE|8344|histone cluster 1, H2be##NM_003523|HIST1H2BE|8344|histone cluster 1, H2be##BC128104|HIST1H4D|8360|histone cluster 1, H4d##BC143045|HIST1H4D|8360|histone cluster 1, H4d##NM_003539|HIST1H4D|8360|histone cluster 1, H4d##DQ892795|HIST1H3D|8351|histone cluster 1, H3d##DQ896042|HIST1H3D|8351|histone cluster 1, H3d	0.886926	CTCF.p2:-19:0.887
chr18	32966604	32966722	reg1014703.p1	8.985	+	BC130288 BC136314 AF492004 AF533251 AK055775 NM_145756	-9370	-	TSC_hg19_v1_chr18_-_32924421 AK291246 NM_006965	-42242	-	TSC_hg19_v1_chr18_-_32924385 AF038964 BC003566 U68536 BC016801	-42265	-	AK095502 AK300660 BC039404 NM_001098817 NM_194281	111262	-	NM_020474 BC047746 U41514 AB529022 X85018	267916	+	NM_001201474 NM_001201475 NM_001201476 NM_031446 BC108730 TSC_hg19_v1_chr18_+_33552656 BC119765 BC119766 AK311536 AF277182 AF277189 BC025950	586004	+	BC130288|ZNF396|252884|zinc finger protein 396##BC136314|ZNF396|252884|zinc finger protein 396##AF492004|ZNF396|252884|zinc finger protein 396##AF533251|ZNF396|252884|zinc finger protein 396##AK055775|ZNF396|252884|zinc finger protein 396##NM_145756|ZNF396|252884|zinc finger protein 396##AK291246|ZNF24|7572|zinc finger protein 24##NM_006965|ZNF24|7572|zinc finger protein 24##AF038964|ZNF24|7572|zinc finger protein 24##BC003566|ZNF24|7572|zinc finger protein 24##U68536|ZNF24|7572|zinc finger protein 24##BC016801|ZNF24|7572|zinc finger protein 24##AK095502|INO80C|125476|INO80 complex subunit C##AK300660|INO80C|125476|INO80 complex subunit C##BC039404|INO80C|125476|INO80 complex subunit C##NM_001098817|INO80C|125476|INO80 complex subunit C##NM_194281|INO80C|125476|INO80 complex subunit C##NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21##NM_031446|C18orf21|83608|chromosome 18 open reading frame 21##BC108730|C18orf21|83608|chromosome 18 open reading frame 21##BC119765|C18orf21|83608|chromosome 18 open reading frame 21##BC119766|C18orf21|83608|chromosome 18 open reading frame 21##AF277182|C18orf21|83608|chromosome 18 open reading frame 21##AF277189|C18orf21|83608|chromosome 18 open reading frame 21##BC025950|C18orf21|83608|chromosome 18 open reading frame 21	0.841363	CTCF.p2:-1:0.841
chr17	35111995	35112136	reg1013924.p1	8.983	+	AK292307 NM_024864 BC072411	-154014	+	TSC_hg19_v1_chr17_+_34948329 NM_024308 AK315735 AY358712 BC002731	-163777	+	TSC_hg19_v1_chr17_+_34901498 AK290687 AF126964	-210553	+	BC084573 TSC_hg19_v1_chr17_-_35293961	181875	-	BC020470 NM_005568	182706	+	AK057229 NM_012138 TSC_hg19_v1_chr17_+_35306253 AF083208 BC000591 AJ249940 AB385572 CU674286 DQ892097 DQ895290	194234	+	AK292307|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024864|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##BC072411|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024308|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK315735|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AY358712|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##BC002731|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK290687|GGNBP2|79893|gametogenetin binding protein 2##AF126964|GGNBP2|79893|gametogenetin binding protein 2##BC020470|LHX1|3975|LIM homeobox 1##NM_005568|LHX1|3975|LIM homeobox 1##AK057229|AATF|26574|apoptosis antagonizing transcription factor##NM_012138|AATF|26574|apoptosis antagonizing transcription factor##AF083208|AATF|26574|apoptosis antagonizing transcription factor##BC000591|AATF|26574|apoptosis antagonizing transcription factor##AJ249940|AATF|26574|apoptosis antagonizing transcription factor##DQ892097|AATF|26574|apoptosis antagonizing transcription factor##DQ895290|AATF|26574|apoptosis antagonizing transcription factor	0.151018	
chr5	157502384	157502527	reg1014100.p1	8.983	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-216365	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-318075	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-331715	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	1024002	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	1024287	-	AK304228 NM_001199382	1132193	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.714957	CTCF.p2:-8:0.715
chrX	133655023	133655162	reg1017154.p1	8.983	+	TSC_hg19_v1_chrX_+_133594303 BC000578 BT019350 CR407645 DQ895107 DQ895109 EU176316 EU176655 L29382 L29383	-60773	+	TSC_hg19_v1_chrX_+_133594225 M31642	-60836	+	TSC_hg19_v1_chrX_+_133594194 NM_000194 AK313435	-60895	+	BC022335 AF234654 BC066327 AK075086 NM_021796	137412	-	AB541014 AB541015 AB528130 AM393279 CU676388 AK125991 TSC_hg19_v1_chrX_-_133930299 AK292517 AL832218 NM_001170756 NM_145284	275217	-	AK307219 NM_001170780	275350	+	BC000578|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##BT019350|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##CR407645|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895107|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895109|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176316|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176655|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29382|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29383|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##M31642|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##NM_000194|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##AK313435|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##BC022335|PLAC1|10761|placenta-specific 1##AF234654|PLAC1|10761|placenta-specific 1##BC066327|PLAC1|10761|placenta-specific 1##AK075086|PLAC1|10761|placenta-specific 1##NM_021796|PLAC1|10761|placenta-specific 1##AB541015|FAM122B|159090|family with sequence similarity 122B##AM393279|FAM122B|159090|family with sequence similarity 122B##AK125991|FAM122B|159090|family with sequence similarity 122B##AK292517|FAM122B|159090|family with sequence similarity 122B##AL832218|FAM122B|159090|family with sequence similarity 122B##NM_001170756|FAM122B|159090|family with sequence similarity 122B##NM_145284|FAM122B|159090|family with sequence similarity 122B##AK307219|FAM122C|159091|family with sequence similarity 122C##NM_001170780|FAM122C|159091|family with sequence similarity 122C	0.98887	CTCF.p2:0:0.989
chr1	171770675	171770823	reg1013478.p1	8.982	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-19911	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-19935	+	NM_001007239 NM_014955 NM_015935 TSC_hg19_v1_chr1_+_171750799 AK304471 AK223493	-19969	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	39954	+	AL035295 NM_139240 BC038410	619079	+	TSC_hg19_v1_chr1_-_172413202 BC006539	642439	-	AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##NM_001007239|METTL13|51603|methyltransferase like 13##NM_014955|METTL13|51603|methyltransferase like 13##NM_015935|METTL13|51603|methyltransferase like 13##AK304471|METTL13|51603|methyltransferase like 13##AK223493|METTL13|51603|methyltransferase like 13##NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.998873	CTCF.p2:-11:0.999
chr17	74723192	74723372	reg1013942.p2	8.980	+	TSC_hg19_v1_chr17_+_74722935 NM_001080510 NM_001206983 NM_001206984 NM_001206985 NM_001206986 NM_001206987 BC033998 BC045819 BC106939	-313	+	TSC_hg19_v1_chr17_-_74722857 EF527406 EF527407 NM_001081461 NM_015167	-421	-	TSC_hg19_v1_chr17_-_74722680 BC047003 AK294816	-568	-	TSC_hg19_v1_chr17_+_74732715 AF015190 NM_001242534 AF015186 AF015187	9499	+	AB385010 BT007250 CU688224 DQ891210 DQ894393 X62447 BC001303 BC000339 M90104 AK223252 BC066958 BC070086 AK092489 AK093626 AK097069 AK098209 AK123712 AK126432 AK297813 AX748231 TSC_hg19_v1_chr17_-_74733414	10047	-	TSC_hg19_v1_chr17_-_74733465 AK124792 NM_001195427 NM_003016	10174	-	NM_001080510|METTL23|124512|methyltransferase like 23##NM_001206983|METTL23|124512|methyltransferase like 23##NM_001206984|METTL23|124512|methyltransferase like 23##NM_001206985|METTL23|124512|methyltransferase like 23##NM_001206986|METTL23|124512|methyltransferase like 23##NM_001206987|METTL23|124512|methyltransferase like 23##BC033998|METTL23|124512|methyltransferase like 23##BC045819|METTL23|124512|methyltransferase like 23##BC106939|METTL23|124512|methyltransferase like 23##EF527406|JMJD6|23210|jumonji domain containing 6##EF527407|JMJD6|23210|jumonji domain containing 6##NM_001081461|JMJD6|23210|jumonji domain containing 6##NM_015167|JMJD6|23210|jumonji domain containing 6##BC047003|JMJD6|23210|jumonji domain containing 6##AK294816|JMJD6|23210|jumonji domain containing 6##AF015190|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242534|MFSD11|79157|major facilitator superfamily domain containing 11##AF015186|MFSD11|79157|major facilitator superfamily domain containing 11##AF015187|MFSD11|79157|major facilitator superfamily domain containing 11##BT007250|SRSF2|6427|serine/arginine-rich splicing factor 2##DQ891210|SRSF2|6427|serine/arginine-rich splicing factor 2##DQ894393|SRSF2|6427|serine/arginine-rich splicing factor 2##X62447|SRSF2|6427|serine/arginine-rich splicing factor 2##BC001303|SRSF2|6427|serine/arginine-rich splicing factor 2##BC000339|SRSF2|6427|serine/arginine-rich splicing factor 2##M90104|SRSF2|6427|serine/arginine-rich splicing factor 2##AK223252|SRSF2|6427|serine/arginine-rich splicing factor 2##BC066958|SRSF2|6427|serine/arginine-rich splicing factor 2##BC070086|SRSF2|6427|serine/arginine-rich splicing factor 2##AK092489|SRSF2|6427|serine/arginine-rich splicing factor 2##AK093626|SRSF2|6427|serine/arginine-rich splicing factor 2##AK097069|SRSF2|6427|serine/arginine-rich splicing factor 2##AK098209|SRSF2|6427|serine/arginine-rich splicing factor 2##AK123712|SRSF2|6427|serine/arginine-rich splicing factor 2##AK126432|SRSF2|6427|serine/arginine-rich splicing factor 2##AK124792|SRSF2|6427|serine/arginine-rich splicing factor 2##NM_001195427|SRSF2|6427|serine/arginine-rich splicing factor 2##NM_003016|SRSF2|6427|serine/arginine-rich splicing factor 2	0.033105	
chr6	80176057	80176190	reg1015716.p1	8.980	+	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	-231698	-	L40357 TSC_hg19_v1_chr6_-_79944391 AF401520 AF274949 BC009529	-231765	-	TSC_hg19_v1_chr6_-_79787972 AK057039 NM_017934	-388066	-	TSC_hg19_v1_chr6_-_80247114 AK299314 BX648161 BC050327 NM_001122769 NM_181714	71006	-	TSC_hg19_v1_chr6_+_80341019 AF340151 NM_031469 BC109043 BC109044 AK311757 BC040489 AK074506 BC052987 BC060799 BC070059 AJ297972	164951	+	NM_001243308	404013	-	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3##L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3##BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3##AK057039|PHIP|55023|pleckstrin homology domain interacting protein##NM_017934|PHIP|55023|pleckstrin homology domain interacting protein##AK299314|LCA5|167691|Leber congenital amaurosis 5##BX648161|LCA5|167691|Leber congenital amaurosis 5##BC050327|LCA5|167691|Leber congenital amaurosis 5##NM_001122769|LCA5|167691|Leber congenital amaurosis 5##NM_181714|LCA5|167691|Leber congenital amaurosis 5##AF340151|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_031469|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109043|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109044|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK311757|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC040489|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK074506|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC052987|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC060799|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC070059|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AJ297972|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7	0.580102	CTCF.p2:23:0.580
chrX	1792293	1792407	reg1014200.p2	8.980	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	-58347	+	NM_004043 U11090	-78003	+	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	-81821	+	BC015030 NM_001171135	626229	-	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	626638	-	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	816962	+	AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015030|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1##BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule	0.832022	CTCF.p2:-11:0.832
chr16	68263406	68263519	reg1014573.p2	8.979	+	TSC_hg19_v1_chr16_+_68119350 L41067	-144093	+	TSC_hg19_v1_chr16_+_68119335 AB209824	-144124	+	TSC_hg19_v1_chr16_+_68119279 NM_004555 NM_173163 NM_173165	-144208	+	CU688826 BC030146 BC052309 TSC_hg19_v1_chr16_-_68270026 AK025571 NM_024939	6579	-	AK300596 AK074828 NM_012320 TSC_hg19_v1_chr16_+_68279275 AK296263 AK298494 AL110209 BC062605 AK001705 AK222790	15788	+	AB017494 TSC_hg19_v1_chr16_+_68279299 AY358425 EU832326	15849	+	L41067|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##AB209824|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_004555|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173163|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173165|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##BC030146|ESRP2|80004|epithelial splicing regulatory protein 2##BC052309|ESRP2|80004|epithelial splicing regulatory protein 2##AK025571|ESRP2|80004|epithelial splicing regulatory protein 2##NM_024939|ESRP2|80004|epithelial splicing regulatory protein 2##AK300596|PLA2G15|23659|phospholipase A2, group XV##AK074828|PLA2G15|23659|phospholipase A2, group XV##NM_012320|PLA2G15|23659|phospholipase A2, group XV##AK296263|PLA2G15|23659|phospholipase A2, group XV##AK298494|PLA2G15|23659|phospholipase A2, group XV##AL110209|PLA2G15|23659|phospholipase A2, group XV##BC062605|PLA2G15|23659|phospholipase A2, group XV##AK001705|PLA2G15|23659|phospholipase A2, group XV##AK222790|PLA2G15|23659|phospholipase A2, group XV##AB017494|PLA2G15|23659|phospholipase A2, group XV##AY358425|PLA2G15|23659|phospholipase A2, group XV##EU832326|PLA2G15|23659|phospholipase A2, group XV	0.211171	CTCF.p2:12:0.211
chr5	72815651	72815757	reg1014238.p1	8.979	+	TSC_hg19_v1_chr5_+_72794276 BC061913 AB062126 BC008062 X74070 X53280 AB463433	-21322	+	TSC_hg19_v1_chr5_+_72794266 NM_001037637 NM_001207 AK310919 AK225964 AK291125	-21445	+	NM_004472 U59832 TSC_hg19_v1_chr5_-_72744463	-71295	-	TSC_hg19_v1_chr5_-_72861256 AK022876	45528	-	BC012917 TSC_hg19_v1_chr5_-_72861465 AF251051 NM_023039	45755	-	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	45878	+	BC061913|BTF3|689|basic transcription factor 3##AB062126|BTF3|689|basic transcription factor 3##BC008062|BTF3|689|basic transcription factor 3##X74070|BTF3|689|basic transcription factor 3##X53280|BTF3|689|basic transcription factor 3##NM_001037637|BTF3|689|basic transcription factor 3##NM_001207|BTF3|689|basic transcription factor 3##AK310919|BTF3|689|basic transcription factor 3##AK225964|BTF3|689|basic transcription factor 3##AK291125|BTF3|689|basic transcription factor 3##NM_004472|FOXD1|2297|forkhead box D1##U59832|FOXD1|2297|forkhead box D1##AK022876|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##BC012917|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AF251051|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##NM_023039|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)	0.731317	CTCF.p2:-12:0.731
chr12	80589044	80589176	reg1015458.p1	8.978	+	AF458589 BC092481 NM_001143885 NM_001244990	-259876	-	TSC_hg19_v1_chr12_-_80328937 NM_002480	-260144	-	TSC_hg19_v1_chr12_-_80328878 BC062560 AY380574 BC111752 D87930 AK314193 NM_001244992 BC047898 BC000812	-260310	-	NM_173591	14122	+	NM_001145026	249015	+	NM_002469 AK313287 X52011 BC017834 AB587443 CU676084 DQ893248 DQ896577 CR407641 CR541763	512342	+	AF458589|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC092481|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143885|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001244990|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_002480|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC062560|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##AY380574|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC111752|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##D87930|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##AK314193|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001244992|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC047898|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC000812|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_173591|OTOGL|283310|otogelin-like##NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q##NM_002469|MYF6|4618|myogenic factor 6 (herculin)##AK313287|MYF6|4618|myogenic factor 6 (herculin)##X52011|MYF6|4618|myogenic factor 6 (herculin)##BC017834|MYF6|4618|myogenic factor 6 (herculin)##DQ893248|MYF6|4618|myogenic factor 6 (herculin)##DQ896577|MYF6|4618|myogenic factor 6 (herculin)##CR407641|MYF6|4618|myogenic factor 6 (herculin)##CR541763|MYF6|4618|myogenic factor 6 (herculin)	0.062945	
chr3	46256288	46256398	reg1014381.p1	8.978	+	BC064991 TSC_hg19_v1_chr3_-_46249804 L10918 BC051306 NM_001295	-6534	-	AB189434 AB189435 NM_001024644 NM_005283	-187365	-	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	-219022	-	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	27573	+	AK292685 NM_001123041 NM_001123396	138886	+	TSC_hg19_v1_chr3_+_46395601 AK292920 U03905	139264	+	BC064991|CCR1|1230|chemokine (C-C motif) receptor 1##L10918|CCR1|1230|chemokine (C-C motif) receptor 1##BC051306|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001295|CCR1|1230|chemokine (C-C motif) receptor 1##AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2##AK292920|CCR2|729230|chemokine (C-C motif) receptor 2##U03905|CCR2|729230|chemokine (C-C motif) receptor 2	0.36107	CTCF.p2:-11:0.361
chr9	20885143	20885234	reg1013427.p1	8.977	+	AK056522 AY139834 NM_017794	-226881	+	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	-262692	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	-262740	-	BC114215 TSC_hg19_v1_chr9_-_21031636 BX648779 NM_001010915	146443	-	AB451491 AB451323 AB451452 BC069314 BC096150 BC096151 BC096152 BC096153 V00547 AB587428 V00546 M25460 M28622 NM_002176	192685	-	NM_002177	256955	-	AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC114215|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##BX648779|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##NM_001010915|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##AB451323|IFNB1|3456|interferon, beta 1, fibroblast##AB451452|IFNB1|3456|interferon, beta 1, fibroblast##BC069314|IFNB1|3456|interferon, beta 1, fibroblast##BC096150|IFNB1|3456|interferon, beta 1, fibroblast##BC096151|IFNB1|3456|interferon, beta 1, fibroblast##BC096152|IFNB1|3456|interferon, beta 1, fibroblast##BC096153|IFNB1|3456|interferon, beta 1, fibroblast##V00547|IFNB1|3456|interferon, beta 1, fibroblast##V00546|IFNB1|3456|interferon, beta 1, fibroblast##M25460|IFNB1|3456|interferon, beta 1, fibroblast##M28622|IFNB1|3456|interferon, beta 1, fibroblast##NM_002176|IFNB1|3456|interferon, beta 1, fibroblast##NM_002177|IFNW1|3467|interferon, omega 1	0.996952	CTCF.p2:-2:0.997
chr16	5134907	5135039	reg1014845.p1	8.976	+	NM_019109 TSC_hg19_v1_chr16_+_5121825 AK075373 BC031095 AB019038 BC004402 AK311475 CU678708 DQ895010 EU176309	-13143	+	TSC_hg19_v1_chr16_-_5116030 BC033681 AY358483 NM_001098514 NM_152459	-18886	-	TSC_hg19_v1_chr16_-_5115951 AK075242	-19018	-	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	12795	-	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	934252	+	TSC_hg19_v1_chr16_+_6533765 BC033885	1398802	+	NM_019109|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK075373|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC031095|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AB019038|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC004402|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK311475|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##DQ895010|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##EU176309|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC033681|C16orf89|146556|chromosome 16 open reading frame 89##AY358483|C16orf89|146556|chromosome 16 open reading frame 89##NM_001098514|C16orf89|146556|chromosome 16 open reading frame 89##NM_152459|C16orf89|146556|chromosome 16 open reading frame 89##AK075242|C16orf89|146556|chromosome 16 open reading frame 89##BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	0.095582	
chr5	86309028	86309131	reg1012980.p1	8.975	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	-395262	+	TSC_hg19_v1_chr5_+_85913757 AK026505	-395321	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-2628415	-	TSC_hg19_v1_chr5_+_86563706 CR749722	254606	+	TSC_hg19_v1_chr5_+_86563831 BC131816	254747	+	TSC_hg19_v1_chr5_+_86564085 AB209106 NM_002890 BC033015	254987	+	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.118938	
chr1	209250187	209250305	reg1014120.p1	8.974	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-832597	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-1165689	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-1165863	-	AK091113 AX746785 NM_001104548	351919	+	NM_020439 AK095713 AK289675 AF428261 BC032787	506814	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	574433	-	NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3	1.005846	CTCF.p2:-12:0.958
chr13	80547697	80547826	reg1014473.p1	8.974	+	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-492206	+	TSC_hg19_v1_chr13_+_80055411 AK297197 AK001723	-492339	+	TSC_hg19_v1_chr13_+_80055257 NM_001161407 NM_019080 AB097019 AB097028 AB097029	-492490	+	BC004205 TSC_hg19_v1_chr13_-_80913114	365281	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	367303	-	TSC_hg19_v1_chr13_-_84456424 BC051738	3908664	-	AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##AK297197|NDFIP2|54602|Nedd4 family interacting protein 2##AK001723|NDFIP2|54602|Nedd4 family interacting protein 2##NM_001161407|NDFIP2|54602|Nedd4 family interacting protein 2##NM_019080|NDFIP2|54602|Nedd4 family interacting protein 2##AB097019|NDFIP2|54602|Nedd4 family interacting protein 2##AB097028|NDFIP2|54602|Nedd4 family interacting protein 2##AB097029|NDFIP2|54602|Nedd4 family interacting protein 2##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1	0.498079	CTCF.p2:-7:0.498
chr18	30510805	30510920	reg1015280.p1	8.974	+	BC021267 AB037805 NM_020805	-157955	-	AL834491 BC121067 BC121068 AK025263 NM_001242409 NM_022751	-460442	-	TSC_hg19_v1_chr18_-_29993196 D28353	-517667	-	BC130535 BC144178 BC144179 NM_001105528	509150	-	BC062719 BC091517 AK126038 NM_198995	509797	-	BX648108 TSC_hg19_v1_chr18_-_31158297	647367	-	BC021267|KLHL14|57565|kelch-like 14 (Drosophila)##AB037805|KLHL14|57565|kelch-like 14 (Drosophila)##NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)##AL834491|FAM59A|64762|family with sequence similarity 59, member A##BC121067|FAM59A|64762|family with sequence similarity 59, member A##BC121068|FAM59A|64762|family with sequence similarity 59, member A##AK025263|FAM59A|64762|family with sequence similarity 59, member A##NM_001242409|FAM59A|64762|family with sequence similarity 59, member A##NM_022751|FAM59A|64762|family with sequence similarity 59, member A##BC130535|C18orf34|374864|chromosome 18 open reading frame 34##BC144178|C18orf34|374864|chromosome 18 open reading frame 34##BC144179|C18orf34|374864|chromosome 18 open reading frame 34##NM_001105528|C18orf34|374864|chromosome 18 open reading frame 34##BC062719|C18orf34|374864|chromosome 18 open reading frame 34##BC091517|C18orf34|374864|chromosome 18 open reading frame 34##AK126038|C18orf34|374864|chromosome 18 open reading frame 34##NM_198995|C18orf34|374864|chromosome 18 open reading frame 34	0.0	
chr6	89832463	89832578	reg1014803.p1	8.974	+	AF449428 AB527997 CU692392 TSC_hg19_v1_chr6_-_89827756 AK314008 BC021715 NM_080743	-4818	-	TSC_hg19_v1_chr6_+_89791523 BC044919	-40977	+	TSC_hg19_v1_chr6_+_89790469 AK312665 AK130046 U03105 BC018112 AB464669 AY303779	-41982	+	TSC_hg19_v1_chr6_+_89855838 BC035036 NM_001010853 AK302464 BC045583	23361	+	AK313609 NM_002042	94975	-	BC130352 BC130354 M86868 NM_002043	192431	-	AF449428|SRSF12|135295|serine/arginine-rich splicing factor 12##AK314008|SRSF12|135295|serine/arginine-rich splicing factor 12##BC021715|SRSF12|135295|serine/arginine-rich splicing factor 12##NM_080743|SRSF12|135295|serine/arginine-rich splicing factor 12##BC044919|PNRC1|10957|proline-rich nuclear receptor coactivator 1##AK312665|PNRC1|10957|proline-rich nuclear receptor coactivator 1##AK130046|PNRC1|10957|proline-rich nuclear receptor coactivator 1##U03105|PNRC1|10957|proline-rich nuclear receptor coactivator 1##BC018112|PNRC1|10957|proline-rich nuclear receptor coactivator 1##AY303779|PNRC1|10957|proline-rich nuclear receptor coactivator 1##BC035036|PM20D2|135293|peptidase M20 domain containing 2##NM_001010853|PM20D2|135293|peptidase M20 domain containing 2##AK302464|PM20D2|135293|peptidase M20 domain containing 2##BC045583|PM20D2|135293|peptidase M20 domain containing 2##AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1##NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1##BC130352|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##BC130354|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##M86868|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##NM_002043|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2	0.670501	CTCF.p2:-10:0.671
chr18	5057851	5057964	reg1012948.p1	8.973	+	AK316099 NM_001242761 NM_004746 TSC_hg19_v1_chr18_-_4455271	-602637	-	AK304101 TSC_hg19_v1_chr18_-_4455255	-602654	-	AK294777 AK294717 NM_001242762 NM_001242763	-1183180	-	TSC_hg19_v1_chr18_-_5197257 NM_001145194	139345	-	TSC_hg19_v1_chr18_+_5238098 AK056929 BC041875	180196	+	TSC_hg19_v1_chr18_-_5295610 NM_001243702	237746	-	AK316099|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242761|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_004746|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK304101|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42##NM_001243702|ZFP161|7541|zinc finger protein 161 homolog (mouse)	0.976743	CTCF.p2:27:0.977
chr9	115875189	115875322	reg1011203.p1	8.973	+	AK301275 HQ258583 AF022158 NM_003408 BC126390 BC144145	-56253	-	AK095843 NM_001101338	-100784	-	CU690566 BC048285 AK314414 AK055571 AF242557 NM_033051	-222179	-	TSC_hg19_v1_chr9_+_115913250 NM_001860	37986	+	AX810714 TSC_hg19_v1_chr9_+_115913291 AK057903 AK295544 BC026252 U83461	38028	+	AB385371 TSC_hg19_v1_chr9_-_115983577 AK307498 AB014574 BC009609 AK303074 NM_015258	108328	-	AK301275|ZFP37|7539|zinc finger protein 37 homolog (mouse)##HQ258583|ZFP37|7539|zinc finger protein 37 homolog (mouse)##AF022158|ZFP37|7539|zinc finger protein 37 homolog (mouse)##NM_003408|ZFP37|7539|zinc finger protein 37 homolog (mouse)##BC126390|ZFP37|7539|zinc finger protein 37 homolog (mouse)##BC144145|ZFP37|7539|zinc finger protein 37 homolog (mouse)##AK095843|ZNF883|169834|zinc finger protein 883##NM_001101338|ZNF883|169834|zinc finger protein 883##BC048285|SLC46A2|57864|solute carrier family 46, member 2##AK314414|SLC46A2|57864|solute carrier family 46, member 2##AK055571|SLC46A2|57864|solute carrier family 46, member 2##AF242557|SLC46A2|57864|solute carrier family 46, member 2##NM_033051|SLC46A2|57864|solute carrier family 46, member 2##NM_001860|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2##AK057903|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2##AK295544|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2##BC026252|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2##U83461|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2##AK307498|FKBP15|23307|FK506 binding protein 15, 133kDa##AB014574|FKBP15|23307|FK506 binding protein 15, 133kDa##BC009609|FKBP15|23307|FK506 binding protein 15, 133kDa##AK303074|FKBP15|23307|FK506 binding protein 15, 133kDa##NM_015258|FKBP15|23307|FK506 binding protein 15, 133kDa	1.019598	CTCF.p2:44:0.999
chrY	1742293	1742407	reg1014201.p2	8.973	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	-58347	+	NM_004043 U11090	-78003	+	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	-81821	+	BC015030 NM_001171135	626229	-	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	626638	-	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	816962	+	AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015030|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1##BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule	0.832022	CTCF.p2:-11:0.832
chr11	78509758	78509873	reg1015572.p1	8.972	+	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-223920	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-224023	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	-380939	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	641909	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	3935083	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	4101702	-	AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_080491|GAB2|9846|GRB2-associated binding protein 2##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)	0.821392	CTCF.p2:-2:0.821
chr17	2073452	2073572	reg1013224.p2	8.972	+	DQ187313 NM_001098202	-113955	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-115114	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-128204	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	133300	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	133528	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	133740	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.0	
chr3	99809303	99809429	reg1015612.p1	8.971	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	-214375	-	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	-272621	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	-451916	+	BC017987 NM_001042459 NM_182909 AF329092 AX776292	23986	-	AK300704 NM_001167924	24407	+	TSC_hg19_v1_chr3_+_99898312 AK055026	88995	+	EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like##AK300704|C3orf26|84319|chromosome 3 open reading frame 26##NM_001167924|C3orf26|84319|chromosome 3 open reading frame 26	0.0	
chr5	102307529	102307636	reg1013142.p1	8.970	+	M37721 TSC_hg19_v1_chr5_+_102201730 AK296521 AK290158 S75037 S75038 AB527419 AB095007 BT007419	-105776	+	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	-106052	+	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	-472949	-	BC151135 BC157835 BC015325 CR627424 AK295796 AK225572 AK000132 NM_017676 TSC_hg19_v1_chr5_-_102455843	148231	-	AK310544 AB007893 TSC_hg19_v1_chr5_+_102456004	148399	+	TSC_hg19_v1_chr5_+_102456089 AK294787	148476	+	M37721|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK296521|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK290158|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75037|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75038|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AB095007|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BT007419|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC151135|GIN1|54826|gypsy retrotransposon integrase 1##BC157835|GIN1|54826|gypsy retrotransposon integrase 1##BC015325|GIN1|54826|gypsy retrotransposon integrase 1##CR627424|GIN1|54826|gypsy retrotransposon integrase 1##AK295796|GIN1|54826|gypsy retrotransposon integrase 1##AK225572|GIN1|54826|gypsy retrotransposon integrase 1##AK000132|GIN1|54826|gypsy retrotransposon integrase 1##NM_017676|GIN1|54826|gypsy retrotransposon integrase 1##AB007893|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK294787|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2	0.544869	CTCF.p2:17:0.545
chr12	50361330	50361446	reg1002723.p2	8.969	+	NM_001651	-6110	+	AK225940 NM_000486 BC042496 S73196 S73197 CR542024	-16820	+	CU674012 AB463040 TSC_hg19_v1_chr12_-_50297671 AB023167 BC000051 AK290031 AF190461 NM_012306	-63721	-	NM_001652 U48408	5231	+	BC024144 AB030251 TSC_hg19_v1_chr12_-_50419242 AK000733 AL136794 BC032754 AK315785 NM_001126103 NM_001126104 NM_013277	57845	-	NM_001095 NM_020039 U78180 U78181 BC028722 AK290010	90173	+	NM_001651|AQP5|362|aquaporin 5##AK225940|AQP2|359|aquaporin 2 (collecting duct)##NM_000486|AQP2|359|aquaporin 2 (collecting duct)##BC042496|AQP2|359|aquaporin 2 (collecting duct)##S73196|AQP2|359|aquaporin 2 (collecting duct)##S73197|AQP2|359|aquaporin 2 (collecting duct)##CR542024|AQP2|359|aquaporin 2 (collecting duct)##AB023167|FAIM2|23017|Fas apoptotic inhibitory molecule 2##BC000051|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AK290031|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AF190461|FAIM2|23017|Fas apoptotic inhibitory molecule 2##NM_012306|FAIM2|23017|Fas apoptotic inhibitory molecule 2##NM_001652|AQP6|363|aquaporin 6, kidney specific##U48408|AQP6|363|aquaporin 6, kidney specific##BC024144|RACGAP1|29127|Rac GTPase activating protein 1##AB030251|RACGAP1|29127|Rac GTPase activating protein 1##AK000733|RACGAP1|29127|Rac GTPase activating protein 1##AL136794|RACGAP1|29127|Rac GTPase activating protein 1##BC032754|RACGAP1|29127|Rac GTPase activating protein 1##AK315785|RACGAP1|29127|Rac GTPase activating protein 1##NM_001126103|RACGAP1|29127|Rac GTPase activating protein 1##NM_001126104|RACGAP1|29127|Rac GTPase activating protein 1##NM_013277|RACGAP1|29127|Rac GTPase activating protein 1##NM_001095|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##NM_020039|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78180|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78181|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##BC028722|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##AK290010|ACCN2|41|amiloride-sensitive cation channel 2, neuronal	0.995184	CTCF.p2:8:0.995
chr4	11955876	11955955	reg1025189.p2	8.969	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-525383	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-1269514	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-1496905	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	1530036	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	1530060	-	AB463932 AF009801 EU446467 BC111966 NM_001189	1590160	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.383248	CTCF.p2:5:0.359
chr5	146477846	146477977	reg1016076.p1	8.969	+	AK294659 NM_181677 NM_181678 AK295347	-16889	-	BC031790 NM_181674 NM_181676	-42267	-	AK314810 M64930 NM_004576 AK056192 NM_181675 AK289717 BX647887 NM_001127381	-219612	-	AK094580 NM_001112724 NM_145001 TSC_hg19_v1_chr5_+_146614587 AK315942 BC021666 AK299099	136695	+	CU691634 AB384367 EU832180 EU832273 TSC_hg19_v1_chr5_-_146833229 BC039006 D78014 AK297223 NM_001387 Y07818	355354	-	EU007906 CU687310 EU832163 EU832257 TSC_hg19_v1_chr5_-_146889506	411555	-	AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK314810|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##M64930|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_004576|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK056192|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181675|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK289717|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BX647887|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_001127381|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK094580|STK32A|202374|serine/threonine kinase 32A##NM_001112724|STK32A|202374|serine/threonine kinase 32A##NM_145001|STK32A|202374|serine/threonine kinase 32A##AK315942|STK32A|202374|serine/threonine kinase 32A##BC021666|STK32A|202374|serine/threonine kinase 32A##AK299099|STK32A|202374|serine/threonine kinase 32A##EU832180|DPYSL3|1809|dihydropyrimidinase-like 3##EU832273|DPYSL3|1809|dihydropyrimidinase-like 3##BC039006|DPYSL3|1809|dihydropyrimidinase-like 3##D78014|DPYSL3|1809|dihydropyrimidinase-like 3##AK297223|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3##Y07818|DPYSL3|1809|dihydropyrimidinase-like 3##EU007906|DPYSL3|1809|dihydropyrimidinase-like 3##EU832163|DPYSL3|1809|dihydropyrimidinase-like 3##EU832257|DPYSL3|1809|dihydropyrimidinase-like 3	0.274027	CTCF.p2:-9:0.274
chr16	17372108	17372217	reg1013566.p2	8.968	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-1045632	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1045674	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-1045680	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	192643	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1201229	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1425934	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.578863	CTCF.p2:-11:0.546
chr19	4558502	4558620	reg1012550.p1	8.968	+	AK127689 BC070198 TSC_hg19_v1_chr19_-_4540114	-18461	-	AF403428 NM_052972 BC034389 AB073607 AK027382 AK303861 AK314506 TSC_hg19_v1_chr19_-_4540049	-18517	-	DQ839131 BC131524 BC033570 NM_001013706 TSC_hg19_v1_chr19_-_4535237	-23341	-	BC142617 TSC_hg19_v1_chr19_-_4559731 AK300037 NM_032108	1180	-	NM_152362 TSC_hg19_v1_chr19_+_4639539 BC017672 AK097251	80977	+	NM_001167942	81467	+	BC070198|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AF403428|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_052972|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##BC034389|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AB073607|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK027382|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK303861|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK314506|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##DQ839131|PLIN5|440503|perilipin 5##BC131524|PLIN5|440503|perilipin 5##BC033570|PLIN5|440503|perilipin 5##NM_001013706|PLIN5|440503|perilipin 5##BC142617|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##AK300037|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##NM_032108|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##NM_152362|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC017672|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##AK097251|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##NM_001167942|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1	0.592011	CTCF.p2:-4:0.592
chr3	187458783	187458931	reg1013758.p1	8.968	+	S67779 NM_001130845	-4592	-	EU139066 NM_001134738	-6176	-	BC068081 NM_001004312	-38513	-	BC142705 BC150184 Z21943 AK304325 AK308162 TSC_hg19_v1_chr3_-_187463257 BC146796	4387	-	U00115 NM_001706	4636	-	AL833171 TSC_hg19_v1_chr3_+_187870843	411970	+	S67779|BCL6|604|B-cell CLL/lymphoma 6##NM_001130845|BCL6|604|B-cell CLL/lymphoma 6##EU139066|BCL6|604|B-cell CLL/lymphoma 6##NM_001134738|BCL6|604|B-cell CLL/lymphoma 6##BC068081|RTP2|344892|receptor (chemosensory) transporter protein 2##NM_001004312|RTP2|344892|receptor (chemosensory) transporter protein 2##BC142705|BCL6|604|B-cell CLL/lymphoma 6##BC150184|BCL6|604|B-cell CLL/lymphoma 6##Z21943|BCL6|604|B-cell CLL/lymphoma 6##AK304325|BCL6|604|B-cell CLL/lymphoma 6##AK308162|BCL6|604|B-cell CLL/lymphoma 6##BC146796|BCL6|604|B-cell CLL/lymphoma 6##U00115|BCL6|604|B-cell CLL/lymphoma 6##NM_001706|BCL6|604|B-cell CLL/lymphoma 6##AL833171|LPP|4026|LIM domain containing preferred translocation partner in lipoma	0.882168	CTCF.p2:-31:0.865
chr9	112174301	112174418	reg1013059.p2	8.967	+	TSC_hg19_v1_chr9_-_112083330 AB032179	-91069	-	TSC_hg19_v1_chr9_-_112083007 AF153416 AF153418 NM_018424 NM_019114	-91347	-	TSC_hg19_v1_chr9_-_111929489 AF155065 NM_014334	-244830	-	AK296265 AK296388 AK316118 NM_001145371 NM_001145372	16854	-	BX648253 NM_001145369 NM_001145370	39304	-	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	86230	-	AB032179|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF153416|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF153418|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_018424|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_019114|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF155065|C9orf4|23732|chromosome 9 open reading frame 4##NM_014334|C9orf4|23732|chromosome 9 open reading frame 4##AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BX648253|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145369|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145370|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	0.0	
chr12	14338939	14339090	reg1016150.p1	8.966	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-206028	-	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-989285	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-989297	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	179621	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	199258	+	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	381595	-	BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1	0.911374	CTCF.p2:11:0.911
chr16	17305762	17305914	reg1016125.p1	8.966	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-979308	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-979350	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-979356	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	258967	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1267553	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1492258	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.816879	CTCF.p2:-38:0.761
chr18	21085593	21085738	reg1014753.p2	8.966	+	TSC_hg19_v1_chr18_+_21083474 NM_013326 AK057192 AK295246 AK296230 AK294169 BC008305 BC002950	-2191	+	TSC_hg19_v1_chr18_+_21033285 AF013591	-52361	+	TSC_hg19_v1_chr18_+_21033263 BC039729	-52395	+	TSC_hg19_v1_chr18_-_21166428 BC063302 AF002020	80743	-	TSC_hg19_v1_chr18_-_21166458 AK295715 NM_000271	80845	-	TSC_hg19_v1_chr18_-_21242592 CU688952 AK313667 AK057782 BC030622 NM_173505	157055	-	NM_013326|C18orf8|29919|chromosome 18 open reading frame 8##AK057192|C18orf8|29919|chromosome 18 open reading frame 8##AK295246|C18orf8|29919|chromosome 18 open reading frame 8##AK296230|C18orf8|29919|chromosome 18 open reading frame 8##AK294169|C18orf8|29919|chromosome 18 open reading frame 8##BC008305|C18orf8|29919|chromosome 18 open reading frame 8##BC002950|C18orf8|29919|chromosome 18 open reading frame 8##AF013591|RIOK3|8780|RIO kinase 3 (yeast)##BC039729|RIOK3|8780|RIO kinase 3 (yeast)##BC063302|NPC1|4864|Niemann-Pick disease, type C1##AF002020|NPC1|4864|Niemann-Pick disease, type C1##AK295715|NPC1|4864|Niemann-Pick disease, type C1##NM_000271|NPC1|4864|Niemann-Pick disease, type C1##AK313667|ANKRD29|147463|ankyrin repeat domain 29##AK057782|ANKRD29|147463|ankyrin repeat domain 29##BC030622|ANKRD29|147463|ankyrin repeat domain 29##NM_173505|ANKRD29|147463|ankyrin repeat domain 29	0.0	
chr5	59109653	59109759	reg1011540.p1	8.966	+	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	-45251	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	-45358	-	U50159 NM_006203 L20970	-227407	-	NM_001104631	79914	-	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	674198	-	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	674334	+	NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)	0.176034	
chr6	4282152	4282314	reg1017103.p1	8.966	+	TSC_hg19_v1_chr6_+_4136242 AK092451	-145960	+	BC034702 NM_001166010 TSC_hg19_v1_chr6_-_4135810 AF244138 AF153612 EU832093 EU832185 AF069301 BC033841 AF257175 BC025287 EU832094 EU832186 BC017474 BC008458 AL136642 BC016781 AK222617 BC002668 AK075108 AK223003 AK297049 AK057175 NM_006117 NM_206836	-146468	-	NM_001085401 BC047663 BC066986	-202789	+	TSC_hg19_v1_chr6_+_4776647 AK291601 BC108725 NM_004824	494427	+	TSC_hg19_v1_chr6_+_4776889 BC119682	494688	+	AK296985 NM_001143970	554098	+	AK092451|LOC100507506|100507506|uncharacterized LOC100507506##BC034702|ECI2|10455|enoyl-CoA delta isomerase 2##NM_001166010|ECI2|10455|enoyl-CoA delta isomerase 2##AF244138|ECI2|10455|enoyl-CoA delta isomerase 2##AF153612|ECI2|10455|enoyl-CoA delta isomerase 2##EU832093|ECI2|10455|enoyl-CoA delta isomerase 2##EU832185|ECI2|10455|enoyl-CoA delta isomerase 2##AF069301|ECI2|10455|enoyl-CoA delta isomerase 2##BC033841|ECI2|10455|enoyl-CoA delta isomerase 2##AF257175|ECI2|10455|enoyl-CoA delta isomerase 2##BC025287|ECI2|10455|enoyl-CoA delta isomerase 2##EU832094|ECI2|10455|enoyl-CoA delta isomerase 2##EU832186|ECI2|10455|enoyl-CoA delta isomerase 2##BC017474|ECI2|10455|enoyl-CoA delta isomerase 2##BC008458|ECI2|10455|enoyl-CoA delta isomerase 2##AL136642|ECI2|10455|enoyl-CoA delta isomerase 2##BC016781|ECI2|10455|enoyl-CoA delta isomerase 2##AK222617|ECI2|10455|enoyl-CoA delta isomerase 2##BC002668|ECI2|10455|enoyl-CoA delta isomerase 2##AK075108|ECI2|10455|enoyl-CoA delta isomerase 2##AK223003|ECI2|10455|enoyl-CoA delta isomerase 2##AK297049|ECI2|10455|enoyl-CoA delta isomerase 2##AK057175|ECI2|10455|enoyl-CoA delta isomerase 2##NM_006117|ECI2|10455|enoyl-CoA delta isomerase 2##NM_206836|ECI2|10455|enoyl-CoA delta isomerase 2##NM_001085401|C6orf201|404220|chromosome 6 open reading frame 201##BC047663|C6orf201|404220|chromosome 6 open reading frame 201##BC066986|C6orf201|404220|chromosome 6 open reading frame 201##AK291601|CDYL|9425|chromodomain protein, Y-like##BC108725|CDYL|9425|chromodomain protein, Y-like##NM_004824|CDYL|9425|chromodomain protein, Y-like##BC119682|CDYL|9425|chromodomain protein, Y-like##AK296985|CDYL|9425|chromodomain protein, Y-like##NM_001143970|CDYL|9425|chromodomain protein, Y-like	0.0	
chr6	114180218	114180360	reg1013262.p2	8.965	+	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	-1555	+	AK122906 NM_001013734	-1511758	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1604394	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	111983	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	112047	-	AF503292 NM_153612 BC093911 BC093913	203735	-	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	0.97217	CTCF.p2:0:0.972
chr8	119431403	119431557	reg1014253.p1	8.965	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	-307519	-	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	-898438	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	-898522	+	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	202645	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	202727	-	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	532740	-	AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##NM_080651|MED30|90390|mediator complex subunit 30##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	0.999836	CTCF.p2:6:1.000
chr7	134374890	134375033	reg1016209.p1	8.964	+	NM_001724 NM_199186 TSC_hg19_v1_chr7_+_134331586 BC017050 AK315439 AK097778 X04327	-43376	+	NM_001080538	-141113	+	AF524864 NM_020299 BC008837	-162591	+	TSC_hg19_v1_chr7_+_134464170 NM_004342 NM_033138 NM_033157 AK289686	89205	+	TSC_hg19_v1_chr7_+_134464387 AK298524 AK304729 AF247820 M83216	89428	+	TSC_hg19_v1_chr7_+_134464419 BC040354	89461	+	NM_001724|BPGM|669|2,3-bisphosphoglycerate mutase##NM_199186|BPGM|669|2,3-bisphosphoglycerate mutase##BC017050|BPGM|669|2,3-bisphosphoglycerate mutase##AK315439|BPGM|669|2,3-bisphosphoglycerate mutase##AK097778|BPGM|669|2,3-bisphosphoglycerate mutase##X04327|BPGM|669|2,3-bisphosphoglycerate mutase##NM_001080538|AKR1B15|441282|aldo-keto reductase family 1, member B15##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_004342|CALD1|800|caldesmon 1##NM_033138|CALD1|800|caldesmon 1##NM_033157|CALD1|800|caldesmon 1##AK289686|CALD1|800|caldesmon 1##AK298524|CALD1|800|caldesmon 1##AK304729|CALD1|800|caldesmon 1##AF247820|CALD1|800|caldesmon 1##M83216|CALD1|800|caldesmon 1##BC040354|CALD1|800|caldesmon 1	0.0	
chr17	34176612	34176749	reg1016170.p1	8.963	+	BC039129 TSC_hg19_v1_chr17_+_34171892	-4893	+	TSC_hg19_v1_chr17_+_34136487 BC048985 AK304520 AK307637 AK314194 BC030591 NM_003487 NM_139215 U51334 AK313223 BC046099 X98893	-40171	+	AF219624 BC011774 AY358987 TSC_hg19_v1_chr17_-_34122596 BC002631 AF330002 NM_001032278 NM_024302 AK122604	-54052	-	HQ258319 BC132681 BC144011 BC033734 AK301943 AK301884 AK057392 AK301774 NM_152781	19139	-	AF266753 DQ230537 AB463488 AF043341 DQ891490 DQ894681 M21121 BC008600 TSC_hg19_v1_chr17_-_34207365 AK312212 NM_002985	30666	-	EF488473 EF488479 EF488480 EF488481 EF488482 EU176448 NM_001163122 NM_001163124 NM_001163125 NM_001163130	80613	-	BC039129|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##BC048985|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK304520|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK307637|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK314194|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##BC030591|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##NM_003487|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##NM_139215|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##U51334|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK313223|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##BC046099|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##X98893|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AF219624|MMP28|79148|matrix metallopeptidase 28##BC011774|MMP28|79148|matrix metallopeptidase 28##AY358987|MMP28|79148|matrix metallopeptidase 28##BC002631|MMP28|79148|matrix metallopeptidase 28##AF330002|MMP28|79148|matrix metallopeptidase 28##NM_001032278|MMP28|79148|matrix metallopeptidase 28##NM_024302|MMP28|79148|matrix metallopeptidase 28##AK122604|MMP28|79148|matrix metallopeptidase 28##HQ258319|C17orf66|256957|chromosome 17 open reading frame 66##BC132681|C17orf66|256957|chromosome 17 open reading frame 66##BC144011|C17orf66|256957|chromosome 17 open reading frame 66##BC033734|C17orf66|256957|chromosome 17 open reading frame 66##AK301943|C17orf66|256957|chromosome 17 open reading frame 66##AK301884|C17orf66|256957|chromosome 17 open reading frame 66##AK057392|C17orf66|256957|chromosome 17 open reading frame 66##AK301774|C17orf66|256957|chromosome 17 open reading frame 66##NM_152781|C17orf66|256957|chromosome 17 open reading frame 66##AF266753|CCL5|6352|chemokine (C-C motif) ligand 5##DQ230537|CCL5|6352|chemokine (C-C motif) ligand 5##AF043341|CCL5|6352|chemokine (C-C motif) ligand 5##DQ891490|CCL5|6352|chemokine (C-C motif) ligand 5##DQ894681|CCL5|6352|chemokine (C-C motif) ligand 5##M21121|CCL5|6352|chemokine (C-C motif) ligand 5##BC008600|CCL5|6352|chemokine (C-C motif) ligand 5##AK312212|CCL5|6352|chemokine (C-C motif) ligand 5##NM_002985|CCL5|6352|chemokine (C-C motif) ligand 5##EF488473|RDM1|201299|RAD52 motif 1##EF488479|RDM1|201299|RAD52 motif 1##EF488480|RDM1|201299|RAD52 motif 1##EF488481|RDM1|201299|RAD52 motif 1##EF488482|RDM1|201299|RAD52 motif 1##EU176448|RDM1|201299|RAD52 motif 1##NM_001163122|RDM1|201299|RAD52 motif 1##NM_001163124|RDM1|201299|RAD52 motif 1##NM_001163125|RDM1|201299|RAD52 motif 1##NM_001163130|RDM1|201299|RAD52 motif 1	1.012749	CTCF.p2:0:0.999
chr1	225742041	225742175	reg1010227.p1	8.962	+	NM_194442	-125552	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	-126307	-	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	-126379	-	AF519769 TSC_hg19_v1_chr1_-_225840803 AY345143 AK290179 BC095481 NM_001008493 NM_018212	98679	-	NM_001130440 NM_003133 TSC_hg19_v1_chr1_+_225965547 BC066957 BC008443 EF488978 AF070649 BC021995 BC106005 U20998 BC015094 AK289595 BC022415 BC045603	223424	+	TSC_hg19_v1_chr1_+_225965556 BC064351 AL050363 BC067845	223462	+	NM_194442|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##AF519769|ENAH|55740|enabled homolog (Drosophila)##AY345143|ENAH|55740|enabled homolog (Drosophila)##AK290179|ENAH|55740|enabled homolog (Drosophila)##BC095481|ENAH|55740|enabled homolog (Drosophila)##NM_001008493|ENAH|55740|enabled homolog (Drosophila)##NM_018212|ENAH|55740|enabled homolog (Drosophila)##NM_001130440|SRP9|6726|signal recognition particle 9kDa##NM_003133|SRP9|6726|signal recognition particle 9kDa##BC066957|SRP9|6726|signal recognition particle 9kDa##BC008443|SRP9|6726|signal recognition particle 9kDa##EF488978|SRP9|6726|signal recognition particle 9kDa##AF070649|SRP9|6726|signal recognition particle 9kDa##BC021995|SRP9|6726|signal recognition particle 9kDa##BC106005|SRP9|6726|signal recognition particle 9kDa##U20998|SRP9|6726|signal recognition particle 9kDa##BC015094|SRP9|6726|signal recognition particle 9kDa##AK289595|SRP9|6726|signal recognition particle 9kDa##BC022415|SRP9|6726|signal recognition particle 9kDa##BC064351|SRP9|6726|signal recognition particle 9kDa##AL050363|SRP9|6726|signal recognition particle 9kDa##BC067845|SRP9|6726|signal recognition particle 9kDa	0.94213	CTCF.p2:5:0.942
chr3	121265662	121265798	reg1013755.p2	8.962	+	AB209867 TSC_hg19_v1_chr3_-_121264836 CR936627 AY338826 NM_199420	-912	-	TSC_hg19_v1_chr3_+_120627071 NM_014980 AK296544 BC022029 AB023223	-638665	+	NM_005513 TSC_hg19_v1_chr3_+_120461590 AK223401 BC005917 S67859	-804148	+	NM_001012659	21047	+	NM_016298 AK314400 AF204674	46486	+	X16663 BC016758 TSC_hg19_v1_chr3_-_121379751 AK298696 AK300301	113996	-	AB209867|POLQ|10721|polymerase (DNA directed), theta##CR936627|POLQ|10721|polymerase (DNA directed), theta##AY338826|POLQ|10721|polymerase (DNA directed), theta##NM_199420|POLQ|10721|polymerase (DNA directed), theta##NM_014980|STXBP5L|9515|syntaxin binding protein 5-like##AK296544|STXBP5L|9515|syntaxin binding protein 5-like##BC022029|STXBP5L|9515|syntaxin binding protein 5-like##AB023223|STXBP5L|9515|syntaxin binding protein 5-like##NM_005513|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa##AK223401|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa##BC005917|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa##S67859|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa##NM_001012659|ARGFX|503582|arginine-fifty homeobox##NM_016298|FBXO40|51725|F-box protein 40##AK314400|FBXO40|51725|F-box protein 40##AF204674|FBXO40|51725|F-box protein 40##X16663|HCLS1|3059|hematopoietic cell-specific Lyn substrate 1##BC016758|HCLS1|3059|hematopoietic cell-specific Lyn substrate 1##AK298696|HCLS1|3059|hematopoietic cell-specific Lyn substrate 1##AK300301|HCLS1|3059|hematopoietic cell-specific Lyn substrate 1	0.802335	CTCF.p2:-19:0.802
chr4	47838724	47838837	reg1014394.p1	8.962	+	TSC_hg19_v1_chr4_+_47708352 D28417	-130426	+	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	-351450	+	TSC_hg19_v1_chr4_-_47465720 BC008371	-373052	-	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	1310	-	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	77815	-	M84741 NM_001142564 S42457	144709	-	BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D##BC008371|COMMD8|54951|COMM domain containing 8##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1##S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1	0.943825	CTCF.p2:7:0.944
chr5	18282194	18282312	reg1013613.p2	8.962	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-1064413	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-1064641	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-1345868	-	AK295087 BC031051 NM_001167667 NM_004934	1706069	-	TSC_hg19_v1_chr5_+_21459621 AK290693	3177356	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	3177395	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.974446	CTCF.p2:6:0.974
chr9	36991679	36991814	reg1014198.p1	8.961	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-418822	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-590571	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-590849	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	42670	-	TSC_hg19_v1_chr9_+_37079908 AK091718	88160	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	88262	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.99979	CTCF.p2:11:1.000
chr6	43785052	43785186	reg1013882.p1	8.959	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-46249	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-46585	+	TSC_hg19_v1_chr6_+_43738284 AF022375	-46872	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	183255	+	CR627460 TSC_hg19_v1_chr6_+_44094741	309579	+	TSC_hg19_v1_chr6_-_44095161 AK312086	310041	-	M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##AF022375|VEGFA|7422|vascular endothelial growth factor A##BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14	0.266371	CTCF.p2:0:0.266
chr7	94078596	94078732	reg1014421.p1	8.959	+	TSC_hg19_v1_chr7_+_94024206 AK297786 AK223175 AK300194 Z74616 AK226074 BC042586 BC054498 Y00724 CU691094 AB384984	-54393	+	J03464 NM_000089 X02488	-54792	+	BT009853 DQ894078 BC000899 TSC_hg19_v1_chr7_-_93633668 CR749267 AF007551 AK313984 BC012595 NM_005868	-445050	-	TSC_hg19_v1_chr7_+_94139172 BC029543 NM_022900 BC063284 AF397424	60458	+	AK123866 TSC_hg19_v1_chr7_+_94139376 AK314329 BC050313 AF355594	60715	+	AB117974 TSC_hg19_v1_chr7_-_94285409 AF516515 CU692388 DQ894063 EU176189	206729	-	AK297786|COL1A2|1278|collagen, type I, alpha 2##AK223175|COL1A2|1278|collagen, type I, alpha 2##AK300194|COL1A2|1278|collagen, type I, alpha 2##Z74616|COL1A2|1278|collagen, type I, alpha 2##AK226074|COL1A2|1278|collagen, type I, alpha 2##BC042586|COL1A2|1278|collagen, type I, alpha 2##BC054498|COL1A2|1278|collagen, type I, alpha 2##Y00724|COL1A2|1278|collagen, type I, alpha 2##J03464|COL1A2|1278|collagen, type I, alpha 2##NM_000089|COL1A2|1278|collagen, type I, alpha 2##X02488|COL1A2|1278|collagen, type I, alpha 2##BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC029543|CASD1|64921|CAS1 domain containing 1##NM_022900|CASD1|64921|CAS1 domain containing 1##BC063284|CASD1|64921|CAS1 domain containing 1##AF397424|CASD1|64921|CAS1 domain containing 1##AK123866|CASD1|64921|CAS1 domain containing 1##AK314329|CASD1|64921|CAS1 domain containing 1##BC050313|CASD1|64921|CAS1 domain containing 1##AF355594|CASD1|64921|CAS1 domain containing 1##AB117974|SGCE|8910|sarcoglycan, epsilon##AF516515|SGCE|8910|sarcoglycan, epsilon##DQ894063|SGCE|8910|sarcoglycan, epsilon##EU176189|SGCE|8910|sarcoglycan, epsilon	0.734091	CTCF.p2:-33:0.734
chr22	37594596	37594713	reg1011882.p2	8.958	+	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	-10363	-	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	-48702	-	CR456446 TSC_hg19_v1_chr22_-_37505748	-88976	-	BC042068 NM_001051 AK291165	13729	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	45567	-	TSC_hg19_v1_chr22_-_37640315 AK096924 BC001485 NM_002872	45647	-	CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##CR456446|TMPRSS6|164656|transmembrane protease, serine 6##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##AK096924|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BC001485|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##NM_002872|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)	0.920765	CTCF.p2:24:0.921
chr17	77042082	77042172	reg1012324.p1	8.957	+	AF329840 NM_198593 BC021553	-11605	+	TSC_hg19_v1_chr17_+_77020308 AK055541	-21817	+	TSC_hg19_v1_chr17_+_77020250 NM_030968 NM_198594	-21885	+	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	28903	+	NM_001082575	436435	-	AY230663 BC041453 NM_178543 AY358622	662762	+	AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_030968|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198594|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7	0.876272	CTCF.p2:-3:0.876
chr17	53847699	53847855	reg1014165.p1	8.956	+	TSC_hg19_v1_chr17_+_53828441 AF114430 NM_001102402 AK058120 BC005112	-19177	+	AK024667 AK314509 TSC_hg19_v1_chr17_+_53828413 BC012084	-19356	+	NM_021213 TSC_hg19_v1_chr17_+_53828339 AF087857 AF151638	-19402	+	NM_153228 AK095654	383059	+	AK314080 NM_005450 TSC_hg19_v1_chr17_+_54671080	823292	+	BC093905 BC093907 NM_001085430	1045472	-	AF114430|PCTP|58488|phosphatidylcholine transfer protein##NM_001102402|PCTP|58488|phosphatidylcholine transfer protein##AK058120|PCTP|58488|phosphatidylcholine transfer protein##BC005112|PCTP|58488|phosphatidylcholine transfer protein##AK024667|PCTP|58488|phosphatidylcholine transfer protein##AK314509|PCTP|58488|phosphatidylcholine transfer protein##BC012084|PCTP|58488|phosphatidylcholine transfer protein##NM_021213|PCTP|58488|phosphatidylcholine transfer protein##AF087857|PCTP|58488|phosphatidylcholine transfer protein##AF151638|PCTP|58488|phosphatidylcholine transfer protein##NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AK314080|NOG|9241|noggin##NM_005450|NOG|9241|noggin##BC093905|C17orf67|339210|chromosome 17 open reading frame 67##BC093907|C17orf67|339210|chromosome 17 open reading frame 67##NM_001085430|C17orf67|339210|chromosome 17 open reading frame 67	0.991304	CTCF.p2:44:0.991
chr3	52446220	52446345	reg1016848.p1	8.955	+	AY014283 TSC_hg19_v1_chr3_+_52445005	-1300	+	TSC_hg19_v1_chr3_+_52444675 BC022002 AK292221	-1606	+	TSC_hg19_v1_chr3_+_52444661 NM_016483 NM_173341	-1691	+	AB029496 BC098104 BC098137 BC099724 NM_020163 TSC_hg19_v1_chr3_-_52479120	32815	-	CR541865 CR541885 DQ891026 DQ894206 AF020769 TSC_hg19_v1_chr3_-_52488058 BC030244 AK313743 NM_003280 X07897	41772	-	TSC_hg19_v1_chr3_+_52489516 NM_007184	43231	+	AY014283|PHF7|51533|PHD finger protein 7##BC022002|PHF7|51533|PHD finger protein 7##AK292221|PHF7|51533|PHD finger protein 7##NM_016483|PHF7|51533|PHD finger protein 7##NM_173341|PHF7|51533|PHD finger protein 7##AB029496|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##BC098104|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##BC098137|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##BC099724|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##NM_020163|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##CR541865|TNNC1|7134|troponin C type 1 (slow)##CR541885|TNNC1|7134|troponin C type 1 (slow)##DQ891026|TNNC1|7134|troponin C type 1 (slow)##DQ894206|TNNC1|7134|troponin C type 1 (slow)##AF020769|TNNC1|7134|troponin C type 1 (slow)##BC030244|TNNC1|7134|troponin C type 1 (slow)##AK313743|TNNC1|7134|troponin C type 1 (slow)##NM_003280|TNNC1|7134|troponin C type 1 (slow)##X07897|TNNC1|7134|troponin C type 1 (slow)##NM_007184|NISCH|11188|nischarin	0.032628	
chr5	70771742	70771878	reg1015702.p1	8.954	+	AF298151 AF298152 TSC_hg19_v1_chr5_+_70751649 AB051476 BC146792 AB384624 BC161615	-20147	+	TSC_hg19_v1_chr5_+_70751479 NM_018429 AK057871 AF176695 BC032146 AJ238520	-20334	+	BC171860 BC171919 U21911 AF078847 NM_001515 AK296578 BX537982 BC005345	-408356	-	TSC_hg19_v1_chr5_+_70883108 BC014897 NM_022132	111297	+	AF310971 TSC_hg19_v1_chr5_+_70883132	111322	+	TSC_hg19_v1_chr5_+_70883166 AB050049 AF301000 AK310194	111341	+	AF298151|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AF298152|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AB051476|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC146792|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC161615|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##NM_018429|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AK057871|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AF176695|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC032146|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AJ238520|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC171860|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC171919|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##U21911|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AF078847|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##NM_001515|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AK296578|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##BX537982|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##BC005345|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##BC014897|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##NM_022132|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AF310971|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AB050049|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AF301000|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AK310194|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)	0.060363	
chr5	94028871	94029020	reg1015611.p1	8.954	+	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	-74572	+	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	-74688	-	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	-581625	-	AK025997 TSC_hg19_v1_chr5_-_94224607	195661	-	AY656716 AK058012 BC030005 AK057694 TSC_hg19_v1_chr5_-_94417350	388323	-	NM_001002796	388599	-	BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1##AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1##BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1##AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_001002796|MCTP1|79772|multiple C2 domains, transmembrane 1	0.16921	
chr1	13462484	13462610	reg1016877.p1	8.953	+	NM_001024661 NM_001099854	-9892	-	AK124292 NM_001010890 NM_001098376 BC101343 BC137391 BC171794	-41365	+	BC140755 NM_001012276	-71792	-	NM_001099790 NM_001099850	15021	-	NM_001045480 BC144662 BC146858	32708	+	NM_001099852	53518	+	NM_001024661|PRAMEF13|400736|PRAME family member 13##NM_001099854|PRAMEF14|729528|PRAME family member 14##AK124292|PRAMEF9|343070|PRAME family member 9##NM_001010890|PRAMEF9|343070|PRAME family member 9##NM_001098376|PRAMEF15|653619|PRAME family member 15##BC101343|PRAMEF9|343070|PRAME family member 9##BC137391|PRAMEF9|343070|PRAME family member 9##BC171794|PRAMEF9|343070|PRAME family member 9##BC140755|PRAMEF7|441871|PRAME family member 7##NM_001012276|PRAMEF8|391002|PRAME family member 8##NM_001099790|PRAMEF19|645414|PRAME family member 19##NM_001099850|PRAMEF18|391003|PRAME family member 18##NM_001045480|PRAMEF16|654348|PRAME family member 16##BC144662|PRAMEF17|391004|PRAME family member 17##BC146858|PRAMEF17|391004|PRAME family member 17##NM_001099852|PRAMEF20|645425|PRAME family member 20	0.743859	CTCF.p2:-6:0.744
chr6	142796011	142796151	reg1015899.p1	8.953	+	TSC_hg19_v1_chr6_+_142623443 BX640873	-172675	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-173012	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-285452	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	470247	-	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	585914	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	585955	+	BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1	0.999479	CTCF.p2:-23:0.999
chr2	65092722	65092903	reg1014934.p1	8.952	+	TSC_hg19_v1_chr2_-_65090764 AK097952	-2071	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-211765	-	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-211963	-	TSC_hg19_v1_chr2_-_65159574 BC037562	66765	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	122788	+	TSC_hg19_v1_chr2_+_65216485 AK298472 AK315986 NM_003038	123679	+	D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##BC037562|LOC400958|400958|uncharacterized LOC400958##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.998586	CTCF.p2:61:0.999
chr7	31014522	31014654	reg1014586.p1	8.952	+	L01406 L09237 NM_000823 AY557192	-10929	+	AK309608 NM_001185060 AK309691 AK309688 NM_001185061 NM_001185062	-53572	+	NM_198098 TSC_hg19_v1_chr7_+_30951467 AK298091 AK298313 AK300995 AK304684 AK312656 AK301351 BC022486 M77829 S73482 U41517 DQ892366 DQ895575 CU692648 AB463415 AB451275 AB451402	-63119	+	TSC_hg19_v1_chr7_+_31092073 NM_001118 NM_001199635 NM_001199636 NM_001199637 AK290046 AK226138	77516	+	AK055238 AF248954 NM_022728	365934	-	AK128026 NM_194300	542389	+	L01406|GHRHR|2692|growth hormone releasing hormone receptor##L09237|GHRHR|2692|growth hormone releasing hormone receptor##NM_000823|GHRHR|2692|growth hormone releasing hormone receptor##AY557192|GHRHR|2692|growth hormone releasing hormone receptor##AK309608|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185060|AQP1|358|aquaporin 1 (Colton blood group)##AK309691|AQP1|358|aquaporin 1 (Colton blood group)##AK309688|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185061|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185062|AQP1|358|aquaporin 1 (Colton blood group)##NM_198098|AQP1|358|aquaporin 1 (Colton blood group)##AK298091|AQP1|358|aquaporin 1 (Colton blood group)##AK298313|AQP1|358|aquaporin 1 (Colton blood group)##AK300995|AQP1|358|aquaporin 1 (Colton blood group)##AK304684|AQP1|358|aquaporin 1 (Colton blood group)##AK312656|AQP1|358|aquaporin 1 (Colton blood group)##AK301351|AQP1|358|aquaporin 1 (Colton blood group)##BC022486|AQP1|358|aquaporin 1 (Colton blood group)##M77829|AQP1|358|aquaporin 1 (Colton blood group)##S73482|AQP1|358|aquaporin 1 (Colton blood group)##U41517|AQP1|358|aquaporin 1 (Colton blood group)##DQ892366|AQP1|358|aquaporin 1 (Colton blood group)##DQ895575|AQP1|358|aquaporin 1 (Colton blood group)##AB451275|AQP1|358|aquaporin 1 (Colton blood group)##AB451402|AQP1|358|aquaporin 1 (Colton blood group)##NM_001118|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199635|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199636|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199637|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK290046|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK226138|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129	0.973727	CTCF.p2:26:0.974
chr8	7538153	7538273	reg1014324.p1	8.952	+	NM_001136572	-98039	-	NM_001136572	-120980	-	DQ119826 NM_001037668 NM_001040705 BC137510 BC137513 AF540979 AY122467	-184796	+	NM_001164452 NM_001164456	34751	+	NM_001164449 NM_001164451	42399	+	NM_001164450	57695	+	NM_001136572|FAM90A7|441317|family with sequence similarity 90, member A7##NM_001136572|FAM90A7|441317|family with sequence similarity 90, member A7##DQ119826|DEFB107A|245910|defensin, beta 107A##NM_001037668|DEFB107A|245910|defensin, beta 107A##NM_001040705|DEFB107B|503614|defensin, beta 107B##BC137510|DEFB107A|245910|defensin, beta 107A##BC137513|DEFB107A|245910|defensin, beta 107A##AF540979|DEFB107A|245910|defensin, beta 107A##AY122467|DEFB107A|245910|defensin, beta 107A##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164449|FAM90A19|728753|family with sequence similarity 90, member A19##NM_001164451|FAM90A18|441326|family with sequence similarity 90, member A18##NM_001164450|FAM90A8|441324|family with sequence similarity 90, member A8	1.019815	CTCF.p2:8:0.999
chr17	65289949	65290071	reg1014554.p1	8.951	+	TSC_hg19_v1_chr17_-_65241313 NM_014877	-48698	-	D29677 AK310217 TSC_hg19_v1_chr17_-_65241302 BC130582 BC144083	-48721	-	NM_000727 L07738 AK313852 BC113486 BC113492 BC069493 HQ258641	-249299	+	CU676364 AB384721 DQ892821 DQ896067 TSC_hg19_v1_chr17_-_65362658 AK222679 BC065826	72638	-	TSC_hg19_v1_chr17_-_65362694 BC019062 AB003103 AK308883 AK307821 AK091198 AX746843 NM_002816 NM_174871	72695	-	TSC_hg19_v1_chr17_+_65373455 BC037261	83399	+	NM_014877|HELZ|9931|helicase with zinc finger##D29677|HELZ|9931|helicase with zinc finger##AK310217|HELZ|9931|helicase with zinc finger##BC130582|HELZ|9931|helicase with zinc finger##BC144083|HELZ|9931|helicase with zinc finger##NM_000727|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##L07738|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##AK313852|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113486|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113492|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC069493|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##HQ258641|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##DQ892821|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##DQ896067|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK222679|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##BC065826|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##BC019062|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AB003103|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK308883|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK307821|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK091198|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##NM_002816|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##NM_174871|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1	0.971951	CTCF.p2:8:0.972
chr18	21166990	21167101	reg1014714.p2	8.951	+	TSC_hg19_v1_chr18_-_21166458 AK295715 NM_000271	-535	-	TSC_hg19_v1_chr18_-_21166428 BC063302 AF002020	-637	-	TSC_hg19_v1_chr18_+_21083474 NM_013326 AK057192 AK295246 AK296230 AK294169 BC008305 BC002950	-83571	+	TSC_hg19_v1_chr18_-_21242592 CU688952 AK313667 AK057782 BC030622 NM_173505	75675	-	TSC_hg19_v1_chr18_+_21269416 AK096422	102369	+	TSC_hg19_v1_chr18_+_21269563 BC093406 NM_001127717 NM_198129 AY327115 AY327116	102542	+	AK295715|NPC1|4864|Niemann-Pick disease, type C1##NM_000271|NPC1|4864|Niemann-Pick disease, type C1##BC063302|NPC1|4864|Niemann-Pick disease, type C1##AF002020|NPC1|4864|Niemann-Pick disease, type C1##NM_013326|C18orf8|29919|chromosome 18 open reading frame 8##AK057192|C18orf8|29919|chromosome 18 open reading frame 8##AK295246|C18orf8|29919|chromosome 18 open reading frame 8##AK296230|C18orf8|29919|chromosome 18 open reading frame 8##AK294169|C18orf8|29919|chromosome 18 open reading frame 8##BC008305|C18orf8|29919|chromosome 18 open reading frame 8##BC002950|C18orf8|29919|chromosome 18 open reading frame 8##AK313667|ANKRD29|147463|ankyrin repeat domain 29##AK057782|ANKRD29|147463|ankyrin repeat domain 29##BC030622|ANKRD29|147463|ankyrin repeat domain 29##NM_173505|ANKRD29|147463|ankyrin repeat domain 29##AK096422|LAMA3|3909|laminin, alpha 3##BC093406|LAMA3|3909|laminin, alpha 3##NM_001127717|LAMA3|3909|laminin, alpha 3##NM_198129|LAMA3|3909|laminin, alpha 3##AY327115|LAMA3|3909|laminin, alpha 3##AY327116|LAMA3|3909|laminin, alpha 3	0.975123	CTCF.p2:-25:0.975
chr2	95742596	95742733	reg1014589.p1	8.951	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	-51182	+	AK097438 BC021716 NM_144705 AK296678 CU692394	-205414	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3894661	-	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	44878	-	AB049940 TSC_hg19_v1_chr2_-_95787749 BC014172 NM_031902	45048	-	AK027363 NM_032788	82598	-	BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5##AB049940|MRPS5|64969|mitochondrial ribosomal protein S5##BC014172|MRPS5|64969|mitochondrial ribosomal protein S5##NM_031902|MRPS5|64969|mitochondrial ribosomal protein S5##AK027363|ZNF514|84874|zinc finger protein 514##NM_032788|ZNF514|84874|zinc finger protein 514	0.981701	CTCF.p2:-9:0.982
chr8	56727764	56727877	reg1014024.p1	8.951	+	AK054705 TSC_hg19_v1_chr8_+_56686187	-41637	+	TSC_hg19_v1_chr8_+_56686028 AY028423 AK314693 BX648548 AF432215	-41800	+	AK308247 AK056932 NM_152417 BC020835 BC071636	-41923	-	TSC_hg19_v1_chr8_+_56792383 M16038 NM_001111097 NM_002350 BC126456 BC126458	64545	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	64575	+	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	64700	+	AY028423|TGS1|96764|trimethylguanosine synthase 1##AK314693|TGS1|96764|trimethylguanosine synthase 1##BX648548|TGS1|96764|trimethylguanosine synthase 1##AF432215|TGS1|96764|trimethylguanosine synthase 1##AK308247|TMEM68|137695|transmembrane protein 68##AK056932|TMEM68|137695|transmembrane protein 68##NM_152417|TMEM68|137695|transmembrane protein 68##BC020835|TMEM68|137695|transmembrane protein 68##BC071636|TMEM68|137695|transmembrane protein 68##M16038|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_001111097|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_002350|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126456|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126458|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog	0.367591	CTCF.p2:0:0.368
chr9	120932459	120932570	reg1014686.p2	8.951	+	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-465827	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	-465900	+	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	-466050	+	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	1199144	-	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	2409839	-	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	2544203	-	U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4##BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9	0.989439	CTCF.p2:-14:0.989
chr1	201500022	201500127	reg1014431.p1	8.949	+	TSC_hg19_v1_chr1_+_201476345 AK097932	-23713	+	TSC_hg19_v1_chr1_-_201476252 AK057876 AK122812 AK302237 AK304415 NM_001193570 NM_004078	-23757	-	BC018806 TSC_hg19_v1_chr1_-_201476245	-23831	-	AY043013 NM_020443 TSC_hg19_v1_chr1_+_201617460	117381	+	TSC_hg19_v1_chr1_+_201617793 BC117683 AJ488101	117654	+	TSC_hg19_v1_chr1_+_201708656 AK056158	208578	+	AK057876|CSRP1|1465|cysteine and glycine-rich protein 1##AK122812|CSRP1|1465|cysteine and glycine-rich protein 1##AK302237|CSRP1|1465|cysteine and glycine-rich protein 1##AK304415|CSRP1|1465|cysteine and glycine-rich protein 1##NM_001193570|CSRP1|1465|cysteine and glycine-rich protein 1##NM_004078|CSRP1|1465|cysteine and glycine-rich protein 1##BC018806|CSRP1|1465|cysteine and glycine-rich protein 1##AY043013|NAV1|89796|neuron navigator 1##NM_020443|NAV1|89796|neuron navigator 1##BC117683|NAV1|89796|neuron navigator 1##AJ488101|NAV1|89796|neuron navigator 1##AK056158|NAV1|89796|neuron navigator 1	0.973173	CTCF.p2:-13:0.973
chr14	46719433	46719537	reg1014328.p1	8.949	+	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-996839	-	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	-997118	-	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-1114296	+	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	401498	-	BC028193 NM_182830	1092930	-	AK309211 NM_001113498	1424671	-	AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	0.64048	CTCF.p2:-1:0.640
chr3	22159362	22159482	reg1012881.p1	8.948	+	AK026072 NM_024697	-366607	-	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-1931748	-	BC070075 TSC_hg19_v1_chr3_+_20081907 BC060823 AB527402	-2077512	+	AK310298 TSC_hg19_v1_chr3_-_22414124	254712	-	TSC_hg19_v1_chr3_+_23244600 AK307075	1085161	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	1085333	+	AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC070075|KAT2B|8850|K(lysine) acetyltransferase 2B##BC060823|KAT2B|8850|K(lysine) acetyltransferase 2B##AK310298|ZNF385D|79750|zinc finger protein 385D##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2	0.415261	CTCF.p2:16:0.415
chr5	44952514	44952651	reg1016918.p1	8.948	+	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	-143555	+	AF508782 AB002097 AF411527 BC069561 CR541665 CR541688 GQ351295 HQ258011 NM_004465 U67918 BC105023 BC105021 BC143772	-563817	-	Z50101 AB385177 AM392664 AM393615 TSC_hg19_v1_chr5_+_43609371	-1343266	+	AF064876 TSC_hg19_v1_chr5_-_45695947	743309	-	AF488549 NM_021072	743637	-	AK300860 TSC_hg19_v1_chr5_-_49737200 BC059398	4784617	-	AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AF508782|FGF10|2255|fibroblast growth factor 10##AB002097|FGF10|2255|fibroblast growth factor 10##AF411527|FGF10|2255|fibroblast growth factor 10##BC069561|FGF10|2255|fibroblast growth factor 10##CR541665|FGF10|2255|fibroblast growth factor 10##CR541688|FGF10|2255|fibroblast growth factor 10##GQ351295|FGF10|2255|fibroblast growth factor 10##HQ258011|FGF10|2255|fibroblast growth factor 10##NM_004465|FGF10|2255|fibroblast growth factor 10##U67918|FGF10|2255|fibroblast growth factor 10##BC105023|FGF10|2255|fibroblast growth factor 10##BC105021|FGF10|2255|fibroblast growth factor 10##Z50101|NNT|23530|nicotinamide nucleotide transhydrogenase##AM392664|NNT|23530|nicotinamide nucleotide transhydrogenase##AM393615|NNT|23530|nicotinamide nucleotide transhydrogenase##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AK300860|EMB|133418|embigin##BC059398|EMB|133418|embigin	0.774325	CTCF.p2:1:0.774
chr6_mann_hap4	2508806	2508932	reg1017365.p1	8.948	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.998737	CTCF.p2:2:0.999
chr12	113430731	113430897	reg1014912.p1	8.947	+	TSC_hg19_v1_chr12_+_113416323 NM_001032731 NM_002535 NM_016817 BC010625 BC053870 BC023637 AK292906 BC069052 BC049215 AK292796 M87284 M87434 AB590925 CU690608	-14474	+	AF063613 TSC_hg19_v1_chr12_+_113376306	-54474	+	TSC_hg19_v1_chr12_+_113376245 AK000608 NM_006187 BC113746 BC012015 AK292949	-54564	+	NM_004416 BC048216	64876	+	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	142598	-	AF086713 AB208935 AK294350 NM_001193520 NM_004658	143217	-	NM_001032731|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_002535|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_016817|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC010625|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC053870|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC023637|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292906|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC069052|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC049215|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292796|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87284|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87434|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AF063613|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##AK000608|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##NM_006187|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##BC113746|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##BC012015|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##AK292949|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)##BC048216|DTX1|1840|deltex homolog 1 (Drosophila)##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	1.967104	CTCF.p2:14:0.996	CTCF.p2:-70:0.971
chr19	16825664	16825775	reg1012786.p1	8.947	+	TSC_hg19_v1_chr19_+_16771949 AK025981 NM_024074 AK292764 BC001195	-53753	+	TSC_hg19_v1_chr19_-_16770956 NM_024104	-54757	-	TSC_hg19_v1_chr19_-_16770944 AK025602 BC069279 BX648276	-54790	-	BX648940 NM_001007525 CR749794	5069	+	TSC_hg19_v1_chr19_+_16940221 NM_015260 AB014600 AY706204 BC063531 BC110821 AB463259 BC025026	114483	+	TSC_hg19_v1_chr19_+_16999830 AF055917 NM_003950	174106	+	AK025981|TMEM38A|79041|transmembrane protein 38A##NM_024074|TMEM38A|79041|transmembrane protein 38A##AK292764|TMEM38A|79041|transmembrane protein 38A##BC001195|TMEM38A|79041|transmembrane protein 38A##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42##AK025602|C19orf42|79086|chromosome 19 open reading frame 42##BC069279|C19orf42|79086|chromosome 19 open reading frame 42##BX648276|C19orf42|79086|chromosome 19 open reading frame 42##BX648940|NWD1|284434|NACHT and WD repeat domain containing 1##NM_001007525|NWD1|284434|NACHT and WD repeat domain containing 1##CR749794|NWD1|284434|NACHT and WD repeat domain containing 1##NM_015260|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##AB014600|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##AY706204|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BC063531|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BC110821|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##BC025026|SIN3B|23309|SIN3 transcription regulator homolog B (yeast)##AF055917|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##NM_003950|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3	0.983881	CTCF.p2:-7:0.984
chr1	41981892	41982023	reg1015129.p1	8.946	+	BC034393 X55177 M65199 NM_001956	-31638	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-274121	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-274172	-	TSC_hg19_v1_chr1_-_42384357 BC040942	402385	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	402416	-	TSC_hg19_v1_chr1_-_42501606 BC046120	519672	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.488675	CTCF.p2:-16:0.489
chr16	30626804	30626931	reg1017073.p1	8.946	+	AK310459 AB065282 BC014000 NM_138447 TSC_hg19_v1_chr16_-_30621684	-5211	-	TSC_hg19_v1_chr16_-_30597103 AK309511 EU446576 AK292465 BC040642 AK298848 AK056692 NM_152458	-29892	-	NM_001024683 NM_145271	-43140	-	TSC_hg19_v1_chr16_+_30662098 CR936781 AK125716	35233	+	TSC_hg19_v1_chr16_+_30662286 BC010232 BC050677 NM_024031 BC011573 BC000119 AK074783	35398	+	NM_001105079	48910	+	AK310459|ZNF689|115509|zinc finger protein 689##AB065282|ZNF689|115509|zinc finger protein 689##BC014000|ZNF689|115509|zinc finger protein 689##NM_138447|ZNF689|115509|zinc finger protein 689##AK309511|ZNF785|146540|zinc finger protein 785##EU446576|ZNF785|146540|zinc finger protein 785##AK292465|ZNF785|146540|zinc finger protein 785##BC040642|ZNF785|146540|zinc finger protein 785##AK298848|ZNF785|146540|zinc finger protein 785##AK056692|ZNF785|146540|zinc finger protein 785##NM_152458|ZNF785|146540|zinc finger protein 785##NM_001024683|ZNF688|146542|zinc finger protein 688##NM_145271|ZNF688|146542|zinc finger protein 688##CR936781|PRR14|78994|proline rich 14##AK125716|PRR14|78994|proline rich 14##BC010232|PRR14|78994|proline rich 14##BC050677|PRR14|78994|proline rich 14##NM_024031|PRR14|78994|proline rich 14##BC011573|PRR14|78994|proline rich 14##BC000119|PRR14|78994|proline rich 14##AK074783|PRR14|78994|proline rich 14##NM_001105079|FBRS|64319|fibrosin	0.344801	CTCF.p2:17:0.332
chr22	41993421	41993521	reg1012934.p2	8.946	+	CU013144 CU013432 AB528210 AK316580 U62526 U86070 CR456544 BC010855 D87810 TSC_hg19_v1_chr22_-_41985841 AK289368 BC016818 NM_002676	-7631	-	TSC_hg19_v1_chr22_+_41957014 NM_014460 AK313407 BC067113 AL834417	-36402	+	TSC_hg19_v1_chr22_-_41940495 AY092087 AK026524 AK129663 NM_138338 NM_001018050 NM_001018052 CR456459	-52971	-	AB528118 CU013008 CU013296 CR456458 BC093956 BC112179 BC171724 TSC_hg19_v1_chr22_-_42017031 AF038183	23465	-	TSC_hg19_v1_chr22_-_42017032 NM_015704	23596	-	TSC_hg19_v1_chr22_+_42017271 AK315618 NM_001469	23805	+	CU013144|PMM1|5372|phosphomannomutase 1##CU013432|PMM1|5372|phosphomannomutase 1##AK316580|PMM1|5372|phosphomannomutase 1##U62526|PMM1|5372|phosphomannomutase 1##U86070|PMM1|5372|phosphomannomutase 1##CR456544|PMM1|5372|phosphomannomutase 1##BC010855|PMM1|5372|phosphomannomutase 1##D87810|PMM1|5372|phosphomannomutase 1##AK289368|PMM1|5372|phosphomannomutase 1##BC016818|PMM1|5372|phosphomannomutase 1##NM_002676|PMM1|5372|phosphomannomutase 1##NM_014460|CSDC2|27254|cold shock domain containing C2, RNA binding##AK313407|CSDC2|27254|cold shock domain containing C2, RNA binding##BC067113|CSDC2|27254|cold shock domain containing C2, RNA binding##AL834417|CSDC2|27254|cold shock domain containing C2, RNA binding##AY092087|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK026524|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK129663|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_138338|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018050|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018052|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##CR456459|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##CR456458|PPPDE2|27351|PPPDE peptidase domain containing 2##BC093956|PPPDE2|27351|PPPDE peptidase domain containing 2##BC112179|PPPDE2|27351|PPPDE peptidase domain containing 2##BC171724|PPPDE2|27351|PPPDE peptidase domain containing 2##AF038183|PPPDE2|27351|PPPDE peptidase domain containing 2##NM_015704|PPPDE2|27351|PPPDE peptidase domain containing 2##AK315618|XRCC6|2547|X-ray repair complementing defective repair in Chinese hamster cells 6##NM_001469|XRCC6|2547|X-ray repair complementing defective repair in Chinese hamster cells 6	0.62856	CTCF.p2:0:0.629
chr4	152038633	152038786	reg1014242.p2	8.946	+	TSC_hg19_v1_chr4_+_152020753 NM_001006 BC001708 M84711 AK308947 BC070211 AK291075 AK296121 BC066926 D28374 AK129825 AK311788 M77234 BC009404 BC018954 BC000204 BC004981 BC009219 BC017123 BC071916 L13802 BC006298 DQ891143 DQ894322 AB464167 CU688198	-17942	+	TSC_hg19_v1_chr4_-_151936880 AK098039	-101819	-	AF216648 NM_006726	-102061	-	X75686 BC108890 BC108891 BC108892 BC108893 NM_001128924	57970	-	BC032404 BX647422 NM_001009555 NM_001128923	108880	-	TSC_hg19_v1_chr4_-_152149045 AK294476 NM_001243349	110402	-	NM_001006|RPS3A|6189|ribosomal protein S3A##BC001708|RPS3A|6189|ribosomal protein S3A##M84711|RPS3A|6189|ribosomal protein S3A##AK308947|RPS3A|6189|ribosomal protein S3A##BC070211|RPS3A|6189|ribosomal protein S3A##AK291075|RPS3A|6189|ribosomal protein S3A##BC066926|RPS3A|6189|ribosomal protein S3A##D28374|RPS3A|6189|ribosomal protein S3A##AK129825|RPS3A|6189|ribosomal protein S3A##AK311788|RPS3A|6189|ribosomal protein S3A##M77234|RPS3A|6189|ribosomal protein S3A##BC009404|RPS3A|6189|ribosomal protein S3A##BC018954|RPS3A|6189|ribosomal protein S3A##BC000204|RPS3A|6189|ribosomal protein S3A##BC004981|RPS3A|6189|ribosomal protein S3A##BC009219|RPS3A|6189|ribosomal protein S3A##BC017123|RPS3A|6189|ribosomal protein S3A##BC071916|RPS3A|6189|ribosomal protein S3A##L13802|RPS3A|6189|ribosomal protein S3A##BC006298|RPS3A|6189|ribosomal protein S3A##DQ891143|RPS3A|6189|ribosomal protein S3A##DQ894322|RPS3A|6189|ribosomal protein S3A##AK098039|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##AF216648|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_006726|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##BC108890|SH3D19|152503|SH3 domain containing 19##BC108891|SH3D19|152503|SH3 domain containing 19##BC108892|SH3D19|152503|SH3 domain containing 19##BC108893|SH3D19|152503|SH3 domain containing 19##NM_001128924|SH3D19|152503|SH3 domain containing 19##BC032404|SH3D19|152503|SH3 domain containing 19##BX647422|SH3D19|152503|SH3 domain containing 19##NM_001009555|SH3D19|152503|SH3 domain containing 19##NM_001128923|SH3D19|152503|SH3 domain containing 19##AK294476|SH3D19|152503|SH3 domain containing 19##NM_001243349|SH3D19|152503|SH3 domain containing 19	0.502955	CTCF.p2:0:0.503
chr5	63525152	63525281	reg1013011.p1	8.946	+	TSC_hg19_v1_chr5_+_63461666 AK090756 AX746601 NM_001113561 NM_178532 BC101277 BC101278 BC101279 AL832580 BC101397	-63535	+	AK314187 TSC_hg19_v1_chr5_-_63258084	-267194	-	AF498978 BC069159 NM_000524 AB464441 BC136263 TSC_hg19_v1_chr5_-_63257719 AK291429 AK311460	-267554	-	BC140707 NM_001029875 BX640900	277265	+	NM_001164442 TSC_hg19_v1_chr5_+_63986235	460969	+	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	539230	-	AK090756|RNF180|285671|ring finger protein 180##NM_001113561|RNF180|285671|ring finger protein 180##NM_178532|RNF180|285671|ring finger protein 180##BC101277|RNF180|285671|ring finger protein 180##BC101278|RNF180|285671|ring finger protein 180##BC101279|RNF180|285671|ring finger protein 180##AL832580|RNF180|285671|ring finger protein 180##BC101397|RNF180|285671|ring finger protein 180##AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AF498978|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC069159|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_000524|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC136263|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK291429|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC140707|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001029875|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##BX640900|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001164442|FAM159B|100132916|family with sequence similarity 159, member B##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1	0.995027	CTCF.p2:-22:0.995
chr5	95297024	95297126	reg1012842.p2	8.946	+	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	-138555	-	AF162769 BT006689 CR450312 CR542165 DQ892497 DQ895709 CU679866 D21238 AF069668 BC106075 X76648 TSC_hg19_v1_chr5_-_95158431 AK311868 BC005304 BC010965	-138675	-	TSC_hg19_v1_chr5_+_95067531 CU691986 AB385392	-229539	+	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	423	-	TSC_hg19_v1_chr5_-_95297609 BC028412 NM_012081	610	-	AK308575 NM_001177876	451613	-	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##AF162769|GLRX|2745|glutaredoxin (thioltransferase)##BT006689|GLRX|2745|glutaredoxin (thioltransferase)##CR450312|GLRX|2745|glutaredoxin (thioltransferase)##CR542165|GLRX|2745|glutaredoxin (thioltransferase)##DQ892497|GLRX|2745|glutaredoxin (thioltransferase)##DQ895709|GLRX|2745|glutaredoxin (thioltransferase)##D21238|GLRX|2745|glutaredoxin (thioltransferase)##AF069668|GLRX|2745|glutaredoxin (thioltransferase)##BC106075|GLRX|2745|glutaredoxin (thioltransferase)##X76648|GLRX|2745|glutaredoxin (thioltransferase)##AK311868|GLRX|2745|glutaredoxin (thioltransferase)##BC005304|GLRX|2745|glutaredoxin (thioltransferase)##BC010965|GLRX|2745|glutaredoxin (thioltransferase)##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2##BC028412|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_012081|ELL2|22936|elongation factor, RNA polymerase II, 2##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1	0.479954	CTCF.p2:-7:0.480
chr7	24615913	24616029	reg1013627.p1	8.946	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	-2883	+	BC029497 NM_000905 AK312156 K01911 M15789	-292128	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-866055	+	TSC_hg19_v1_chr7_-_24797042 BC099911	181066	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	181096	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	181368	-	BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5	0.041169	
chr1	97709637	97709749	reg1012847.p1	8.945	+	BC030757 TSC_hg19_v1_chr1_+_97260652	-449110	+	NM_021190 TSC_hg19_v1_chr1_+_97187343 AK092216 AB051232 AK299755 AK299922 AB209266 AF530580 AF530581 AF176085 AK299897 BC016582 AB051233	-522409	+	AB055763 TSC_hg19_v1_chr1_-_97145197	-564497	-	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	676796	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	676866	-	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	676913	-	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2##AK092216|PTBP2|58155|polypyrimidine tract binding protein 2##AB051232|PTBP2|58155|polypyrimidine tract binding protein 2##AK299755|PTBP2|58155|polypyrimidine tract binding protein 2##AK299922|PTBP2|58155|polypyrimidine tract binding protein 2##AB209266|PTBP2|58155|polypyrimidine tract binding protein 2##AF530580|PTBP2|58155|polypyrimidine tract binding protein 2##AF530581|PTBP2|58155|polypyrimidine tract binding protein 2##AF176085|PTBP2|58155|polypyrimidine tract binding protein 2##AK299897|PTBP2|58155|polypyrimidine tract binding protein 2##BC016582|PTBP2|58155|polypyrimidine tract binding protein 2##AB051233|PTBP2|58155|polypyrimidine tract binding protein 2##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase	0.029174	
chr2	40471875	40472010	reg1015374.p1	8.945	+	TSC_hg19_v1_chr2_-_40006408 NM_025264	-465528	-	TSC_hg19_v1_chr2_-_40006399 CU678598 EU831465 EU831552 AK301353 AK298178 AK226034 BC004163 BC013299 AK307754 AL832115 AK093580 AX748213 AK292002	-465648	-	TSC_hg19_v1_chr2_+_39893056 NM_152390 AK075440 BC029530 AY358773 DQ890996	-578875	+	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	185489	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	207280	-	Y12878 Y12885 AK291696 BX537482 NM_001112802	267630	-	NM_025264|THUMPD2|80745|THUMP domain containing 2##EU831465|THUMPD2|80745|THUMP domain containing 2##EU831552|THUMPD2|80745|THUMP domain containing 2##AK301353|THUMPD2|80745|THUMP domain containing 2##AK298178|THUMPD2|80745|THUMP domain containing 2##AK226034|THUMPD2|80745|THUMP domain containing 2##BC004163|THUMPD2|80745|THUMP domain containing 2##BC013299|THUMPD2|80745|THUMP domain containing 2##AK307754|THUMPD2|80745|THUMP domain containing 2##AL832115|THUMPD2|80745|THUMP domain containing 2##AK093580|THUMPD2|80745|THUMP domain containing 2##AK292002|THUMPD2|80745|THUMP domain containing 2##NM_152390|TMEM178|130733|transmembrane protein 178##AK075440|TMEM178|130733|transmembrane protein 178##BC029530|TMEM178|130733|transmembrane protein 178##AY358773|TMEM178|130733|transmembrane protein 178##DQ890996|TMEM178|130733|transmembrane protein 178##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	0.970076	CTCF.p2:-7:0.970
chr3	127550778	127550917	reg1016845.p1	8.945	+	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	-8705	-	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	-9417	-	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-159030	+	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	83471	+	NM_207335 AB590042 AM393308 AM393457	91055	+	TSC_hg19_v1_chr3_+_127771248 AK027423 AK074706 NM_013336	220340	+	AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##NM_207335|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393308|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393457|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AK027423|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AK074706|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##NM_013336|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	0.99104	CTCF.p2:23:0.991
chr4	26083659	26083799	reg1016935.p1	8.945	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-167865	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-219175	-	NM_001177999 AK314514	-425639	+	L07875 BC020780 NM_005349 NM_203283	237590	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	238580	+	TSC_hg19_v1_chr4_+_26322635 AK302230	238907	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.992377	CTCF.p2:-17:0.992
chr6	110499896	110500002	reg1014434.p1	8.945	+	BC126301 BC117298 BC043414 NM_005284 HQ258210 HQ258216 HQ709190 HQ709191	-199693	+	TSC_hg19_v1_chr6_+_110012521 AK222732	-487425	+	TSC_hg19_v1_chr6_+_110012514 AK291671 AK293422 D87464	-487441	+	TSC_hg19_v1_chr6_-_110500864 BC019019 BC021022 BC044591 AK097838 BC068546	894	-	TSC_hg19_v1_chr6_-_110501166 NM_001024934 NM_001024935 NM_001024936 NM_003931	1236	-	TSC_hg19_v1_chr6_+_110501629 AF038392 NM_015891 BC117145 BC126114 AK314601 AK222721 BC018059 AK295055 AB528038 HQ258473 AB208903 AF061241 AF015044	1674	+	BC126301|GPR6|2830|G protein-coupled receptor 6##BC117298|GPR6|2830|G protein-coupled receptor 6##BC043414|GPR6|2830|G protein-coupled receptor 6##NM_005284|GPR6|2830|G protein-coupled receptor 6##HQ258210|GPR6|2830|G protein-coupled receptor 6##HQ258216|GPR6|2830|G protein-coupled receptor 6##HQ709190|GPR6|2830|G protein-coupled receptor 6##AK222732|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK291671|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK293422|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##D87464|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##BC044591|WASF1|8936|WAS protein family, member 1##AK097838|WASF1|8936|WAS protein family, member 1##BC068546|WASF1|8936|WAS protein family, member 1##NM_001024934|WASF1|8936|WAS protein family, member 1##NM_001024935|WASF1|8936|WAS protein family, member 1##NM_001024936|WASF1|8936|WAS protein family, member 1##NM_003931|WASF1|8936|WAS protein family, member 1##AF038392|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##NM_015891|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC117145|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC126114|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK314601|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK222721|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK295055|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##HQ258473|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AB208903|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AF061241|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AF015044|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	0.0	
chr6	33600440	33600544	reg1014068.p1	8.945	+	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	-11298	+	TSC_hg19_v1_chr6_-_33548037 AK303422 AK293547 NM_001188	-52449	-	U23765 U16811 TSC_hg19_v1_chr6_-_33547998 X84213 BC004431 BC032789 BC110337 AK091807 AK292093	-52577	-	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	78971	-	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	79021	-	AK056586 AK223572 AK289935 BC089389 NM_001142883 NM_054111	114229	-	D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##AK303422|BAK1|578|BCL2-antagonist/killer 1##AK293547|BAK1|578|BCL2-antagonist/killer 1##NM_001188|BAK1|578|BCL2-antagonist/killer 1##U23765|BAK1|578|BCL2-antagonist/killer 1##U16811|BAK1|578|BCL2-antagonist/killer 1##X84213|BAK1|578|BCL2-antagonist/killer 1##BC004431|BAK1|578|BCL2-antagonist/killer 1##BC032789|BAK1|578|BCL2-antagonist/killer 1##BC110337|BAK1|578|BCL2-antagonist/killer 1##AK091807|BAK1|578|BCL2-antagonist/killer 1##AK292093|BAK1|578|BCL2-antagonist/killer 1##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125##AK056586|IP6K3|117283|inositol hexakisphosphate kinase 3##AK223572|IP6K3|117283|inositol hexakisphosphate kinase 3##AK289935|IP6K3|117283|inositol hexakisphosphate kinase 3##BC089389|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_001142883|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_054111|IP6K3|117283|inositol hexakisphosphate kinase 3	0.817396	CTCF.p2:-12:0.745
chrX	100150492	100150600	reg1013981.p1	8.945	+	AJ438989 DQ424904 BC075014 BC075015 AF166326 AF166327 AF166328 AK313678 AK292201 AF127763 NM_007052 NM_013955 TSC_hg19_v1_chrX_-_100129349	-21308	-	EU616679 M85085 TSC_hg19_v1_chrX_+_100075384 BC017712 AK095684 AK300600 DQ891532 DQ894721 AB528418 BT009778 BC033135	-75151	+	NM_001325 TSC_hg19_v1_chrX_+_100075379	-75182	+	AY589511 NM_212559	33351	-	AK301813 NM_001012990 NM_001162490 NM_001162491	74150	+	AK315780 TSC_hg19_v1_chrX_-_100306914 AK022749	156343	-	AJ438989|NOX1|27035|NADPH oxidase 1##DQ424904|NOX1|27035|NADPH oxidase 1##BC075014|NOX1|27035|NADPH oxidase 1##BC075015|NOX1|27035|NADPH oxidase 1##AF166326|NOX1|27035|NADPH oxidase 1##AF166327|NOX1|27035|NADPH oxidase 1##AF166328|NOX1|27035|NADPH oxidase 1##AK313678|NOX1|27035|NADPH oxidase 1##AK292201|NOX1|27035|NADPH oxidase 1##AF127763|NOX1|27035|NADPH oxidase 1##NM_007052|NOX1|27035|NADPH oxidase 1##NM_013955|NOX1|27035|NADPH oxidase 1##EU616679|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##M85085|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##BC017712|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##AK095684|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##AK300600|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##DQ891532|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##DQ894721|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##BT009778|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##BC033135|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##NM_001325|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa##AY589511|XKRX|402415|XK, Kell blood group complex subunit-related, X-linked##NM_212559|XKRX|402415|XK, Kell blood group complex subunit-related, X-linked##AK301813|ARL13A|392509|ADP-ribosylation factor-like 13A##NM_001012990|ARL13A|392509|ADP-ribosylation factor-like 13A##NM_001162490|ARL13A|392509|ADP-ribosylation factor-like 13A##NM_001162491|ARL13A|392509|ADP-ribosylation factor-like 13A##AK315780|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)##AK022749|TRMT2B|79979|TRM2 tRNA methyltransferase 2 homolog B (S. cerevisiae)	0.960641	CTCF.p2:-5:0.961
chr10	9373632	9373773	reg1017012.p1	8.944	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-1276219	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-1276927	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-1277053	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	1673555	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	1673583	+	AK299548 TSC_hg19_v1_chr10_+_11047339	1673638	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.998989	CTCF.p2:-10:0.999
chr11	125439116	125439257	reg1015908.p1	8.944	+	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	-73045	-	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	-404560	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	-404608	+	TSC_hg19_v1_chr11_+_125439294 NM_001007277 NM_004879	109	+	TSC_hg19_v1_chr11_+_125439332 AB209820	139	+	TSC_hg19_v1_chr11_+_125439353 AK223029 AK296620 AK301556	169	+	U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_001007277|EI24|9538|etoposide induced 2.4 mRNA##NM_004879|EI24|9538|etoposide induced 2.4 mRNA##AB209820|EI24|9538|etoposide induced 2.4 mRNA##AK223029|EI24|9538|etoposide induced 2.4 mRNA##AK296620|EI24|9538|etoposide induced 2.4 mRNA##AK301556|EI24|9538|etoposide induced 2.4 mRNA	0.0	
chr16	3053805	3053940	reg1013518.p1	8.944	+	TSC_hg19_v1_chr16_-_3030479 NM_004203 NM_182687	-23366	-	AK098452 TSC_hg19_v1_chr16_-_3030418 AK301926 AK303005 AK097642	-23465	-	TSC_hg19_v1_chr16_+_3019556 AK291373 AK054564 AK092173 AX747391 BC033703 AL832527 EU831903 EU831998 AY424282	-34302	+	AK091002 NM_020982	8584	+	BC008934 AK075329 NM_021195	14302	-	TSC_hg19_v1_chr16_+_3070368 NM_016639 BC002718 AB035480 AB035481 AF191148 BC064377 BC020538 DQ892968 DQ896216 AB590147	16483	+	NM_004203|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##NM_182687|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK098452|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK301926|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK303005|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK097642|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK291373|PAQR4|124222|progestin and adipoQ receptor family member IV##AK054564|PAQR4|124222|progestin and adipoQ receptor family member IV##AK092173|PAQR4|124222|progestin and adipoQ receptor family member IV##BC033703|PAQR4|124222|progestin and adipoQ receptor family member IV##AL832527|PAQR4|124222|progestin and adipoQ receptor family member IV##EU831903|PAQR4|124222|progestin and adipoQ receptor family member IV##EU831998|PAQR4|124222|progestin and adipoQ receptor family member IV##AY424282|PAQR4|124222|progestin and adipoQ receptor family member IV##AK091002|CLDN9|9080|claudin 9##NM_020982|CLDN9|9080|claudin 9##BC008934|CLDN6|9074|claudin 6##AK075329|CLDN6|9074|claudin 6##NM_021195|CLDN6|9074|claudin 6##NM_016639|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##BC002718|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##AB035480|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##AB035481|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##AF191148|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##BC064377|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##BC020538|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##DQ892968|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##DQ896216|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A	1.12327	CTCF.p2:5:0.209	CTCF.p2:105:0.915
chr6	51914418	51914532	reg1014547.p2	8.944	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-1127940	+	AY028376 NM_172238	-1233219	+	DQ012016 NM_001037498	-1898112	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	37920	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	136731	+	AF384857 JF305974 AB590713 BC070124 NM_052872	194786	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.999797	CTCF.p2:10:1.000
chr1	26826769	26826918	reg1017085.p1	8.943	+	TSC_hg19_v1_chr1_+_26799005 BC070297 BC110390 BC000378 BC003050 BC071707 BC032140 BC072010 BC081567 BC014644 BC072011 M12623 BC003689 AK026562 AB464439 CR542122	-27811	+	NM_005517 BC075837 TSC_hg19_v1_chr1_+_26798941	-27921	+	BX648507 NM_001243564 NM_001243565 NM_024887 NM_205861 TSC_hg19_v1_chr1_+_26758838 AK308187 AK316485 BC004117 AK023164 AK297134	-67998	+	TSC_hg19_v1_chr1_+_26856251 NM_002953	29402	+	TSC_hg19_v1_chr1_+_26856253 AK225672	29410	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	29492	+	BC070297|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC110390|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC000378|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC003050|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC071707|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC032140|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC072010|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC081567|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC014644|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC072011|HMGN2|3151|high mobility group nucleosomal binding domain 2##M12623|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC003689|HMGN2|3151|high mobility group nucleosomal binding domain 2##AK026562|HMGN2|3151|high mobility group nucleosomal binding domain 2##CR542122|HMGN2|3151|high mobility group nucleosomal binding domain 2##NM_005517|HMGN2|3151|high mobility group nucleosomal binding domain 2##BC075837|HMGN2|3151|high mobility group nucleosomal binding domain 2##BX648507|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_001243564|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_001243565|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_024887|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_205861|DHDDS|79947|dehydrodolichyl diphosphate synthase##AK308187|DHDDS|79947|dehydrodolichyl diphosphate synthase##AK316485|DHDDS|79947|dehydrodolichyl diphosphate synthase##BC004117|DHDDS|79947|dehydrodolichyl diphosphate synthase##AK023164|DHDDS|79947|dehydrodolichyl diphosphate synthase##AK297134|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_002953|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK225672|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1	0.604037	CTCF.p2:4:0.604
chr3	116489816	116489926	reg1010734.p1	8.943	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-325498	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-325540	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-1147452	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	2263662	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	2263812	-	AK097667 NM_152538 AK292387	2375026	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	1.537636	CTCF.p2:-30:0.961	CTCF.p2:51:0.577
chr6	151139104	151139217	reg1013472.p1	8.943	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	-218140	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	-449002	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-674919	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	47672	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	47761	+	TSC_hg19_v1_chr6_+_151187064 AL117452	47941	+	NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AL117452|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.858582	CTCF.p2:-17:0.859
chr8	95604669	95604772	reg1013461.p1	8.943	+	AB037850 AF116724 HQ258534 TSC_hg19_v1_chr8_-_95565696 AL832487 BC112288 BC113380 NM_015496 NM_183009	-39013	-	BC001965 AF112481 BC020668 AK290437 TSC_hg19_v1_chr8_-_95487344 NM_001205262 NM_012415	-117401	-	AF007866 NM_001205263	-155565	-	AK057998 TSC_hg19_v1_chr8_-_95651772	47014	-	TSC_hg19_v1_chr8_+_95653284 BX647570	48572	+	TSC_hg19_v1_chr8_+_95653392 NM_001034915 NM_001122825 NM_001122826 NM_001122827 NM_017697	48646	+	AB037850|KIAA1429|25962|KIAA1429##AF116724|KIAA1429|25962|KIAA1429##AL832487|KIAA1429|25962|KIAA1429##BC112288|KIAA1429|25962|KIAA1429##BC113380|KIAA1429|25962|KIAA1429##NM_015496|KIAA1429|25962|KIAA1429##NM_183009|KIAA1429|25962|KIAA1429##BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205262|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK057998|LOC100288748|100288748|uncharacterized LOC100288748##BX647570|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001034915|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122825|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122826|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122827|ESRP1|54845|epithelial splicing regulatory protein 1##NM_017697|ESRP1|54845|epithelial splicing regulatory protein 1	0.987524	CTCF.p2:-4:0.988
chr10	29734465	29734608	reg1016523.p1	8.942	+	BC031656 TSC_hg19_v1_chr10_+_29698527 BC063483 AL832706	-36019	+	TSC_hg19_v1_chr10_+_29698496 BC073888	-36038	+	BC107795 AK056080 TSC_hg19_v1_chr10_+_29698485	-36051	+	BX648589 TSC_hg19_v1_chr10_-_29754623	20015	-	TSC_hg19_v1_chr10_-_29923841 BC057241 BC070247	189325	-	AF109135 NM_021738 TSC_hg19_v1_chr10_-_29923901	189371	-	BC031656|LOC387647|387647|patched domain containing 3 pseudogene##BC063483|LOC387647|387647|patched domain containing 3 pseudogene##AL832706|LOC387647|387647|patched domain containing 3 pseudogene##BC073888|LOC387647|387647|patched domain containing 3 pseudogene##BC107795|LOC387647|387647|patched domain containing 3 pseudogene##AK056080|LOC387647|387647|patched domain containing 3 pseudogene##BX648589|SVIL|6840|supervillin##AF109135|SVIL|6840|supervillin##NM_021738|SVIL|6840|supervillin	0.988468	CTCF.p2:17:0.988
chr17	17584528	17584671	reg1012289.p1	8.942	+	TSC_hg19_v1_chr17_-_17495007 CU690728 AF044214 AF113126 BC000557 BC050593 NM_148172 AK302251	-89624	-	AB029821 NM_007169 TSC_hg19_v1_chr17_-_17485751	-98852	-	AF176806 TSC_hg19_v1_chr17_-_17485724	-98892	-	TSC_hg19_v1_chr17_+_17584772 AB058723 AY172136 NM_030665	186	+	TSC_hg19_v1_chr17_+_17608164 AF147359	23599	+	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	142305	-	AF044214|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF113126|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC000557|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC050593|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_148172|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AK302251|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AB029821|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_007169|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF176806|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AB058723|RAI1|10743|retinoic acid induced 1##AY172136|RAI1|10743|retinoic acid induced 1##NM_030665|RAI1|10743|retinoic acid induced 1##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1	0.890558	CTCF.p2:7:0.891
chr6	108301659	108301771	reg1015796.p1	8.942	+	TSC_hg19_v1_chr6_-_108279413 NM_007214	-22269	-	TSC_hg19_v1_chr6_-_108279378 BC023598	-22323	-	TSC_hg19_v1_chr6_-_108279366 BC009066	-22346	-	TSC_hg19_v1_chr6_-_108395868 AK075012	94148	-	TSC_hg19_v1_chr6_-_108395920 BC068581	94205	-	TSC_hg19_v1_chr6_-_108395924 AF533891 AY358795 BC059412 AK129854	94215	-	NM_007214|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC023598|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC009066|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK075012|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC068581|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AF533891|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AY358795|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC059412|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AK129854|OSTM1|28962|osteopetrosis associated transmembrane protein 1	0.0	
chr20	2188288	2188395	reg1014987.p1	8.941	+	TSC_hg19_v1_chr20_-_2083527 BC034792	-104815	-	BC140883 BC140884 TSC_hg19_v1_chr20_+_2083583 AB527968 AF195026 BC111573 BC017340 AK302629	-104826	+	GQ281297 NM_080836 AK314728	-105740	+	NM_003245 AK298637 AK299447 AK308249 AK290324 AK291351 AK315236 L10386 BC109075 BC109076	88308	+	AF540969 AF540970 NM_198994	173212	+	TSC_hg19_v1_chr20_-_2451416 X17568 X17567 BC080516	263049	-	BC140883|STK35|140901|serine/threonine kinase 35##BC140884|STK35|140901|serine/threonine kinase 35##AF195026|STK35|140901|serine/threonine kinase 35##BC111573|STK35|140901|serine/threonine kinase 35##BC017340|STK35|140901|serine/threonine kinase 35##AK302629|STK35|140901|serine/threonine kinase 35##GQ281297|STK35|140901|serine/threonine kinase 35##NM_080836|STK35|140901|serine/threonine kinase 35##AK314728|STK35|140901|serine/threonine kinase 35##NM_003245|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK298637|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK299447|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK308249|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK290324|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291351|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK315236|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##L10386|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109075|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109076|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AF540969|TGM6|343641|transglutaminase 6##AF540970|TGM6|343641|transglutaminase 6##NM_198994|TGM6|343641|transglutaminase 6##X17568|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##X17567|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##BC080516|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1	0.360165	CTCF.p2:0:0.360
chr2	175975970	175976111	reg1016392.p1	8.941	+	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	-106027	-	AK055060 NM_001206602	-263730	-	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	-346871	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	56855	-	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	70264	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	890935	-	AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1##AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715	0.066628	
chr22	35439393	35439511	reg1014642.p1	8.941	+	AJ007583 AB011181 NM_004737 NM_133642	-1123082	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-1985097	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-2036726	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	22697	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	214024	+	AK293694 NM_001135729	255815	+	AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)	0.023228	
chr1	207108955	207109069	reg1013909.p2	8.940	+	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	-13725	-	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	-38212	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	-69837	+	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	10749	-	AK298394 NM_001122979 NM_001170631 NM_032029	34944	-	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	97036	-	BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116	1.055031	CTCF.p2:7:0.999
chr1	226150218	226150335	reg1014848.p2	8.939	+	U81523 BC116448 AF081513 BC035718 AK027520 AK075344 TSC_hg19_v1_chr1_-_226128921 AK304549 NM_001172425 NM_003240 BC065929	-21245	-	AK001508 AK298845 TSC_hg19_v1_chr1_-_226111979	-38297	-	BC014868 TSC_hg19_v1_chr1_-_226111970 AF087859 BC020553 NM_013328	-38325	-	BC016290 TSC_hg19_v1_chr1_-_226187017	36726	-	TSC_hg19_v1_chr1_-_226187023 AK092701 AX747679 BX648319	36746	-	TSC_hg19_v1_chr1_-_226187045 AK291008 AK127780 BC071563 AK308441	36760	-	U81523|LEFTY2|7044|left-right determination factor 2##AF081513|LEFTY2|7044|left-right determination factor 2##BC035718|LEFTY2|7044|left-right determination factor 2##AK027520|LEFTY2|7044|left-right determination factor 2##AK075344|LEFTY2|7044|left-right determination factor 2##AK304549|LEFTY2|7044|left-right determination factor 2##NM_001172425|LEFTY2|7044|left-right determination factor 2##NM_003240|LEFTY2|7044|left-right determination factor 2##BC065929|LEFTY2|7044|left-right determination factor 2##AK001508|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC014868|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##AF087859|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC020553|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##NM_013328|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC016290|C1orf55|163859|chromosome 1 open reading frame 55##AK092701|C1orf55|163859|chromosome 1 open reading frame 55##BX648319|C1orf55|163859|chromosome 1 open reading frame 55##AK291008|C1orf55|163859|chromosome 1 open reading frame 55##AK127780|C1orf55|163859|chromosome 1 open reading frame 55##BC071563|C1orf55|163859|chromosome 1 open reading frame 55##AK308441|C1orf55|163859|chromosome 1 open reading frame 55	0.977163	CTCF.p2:-12:0.977
chr12	130820199	130820307	reg1015024.p2	8.938	+	TSC_hg19_v1_chr12_+_130647008 BC070037 NM_007197	-173243	+	AK056047 TSC_hg19_v1_chr12_-_130646911	-173397	-	BC114626 BC114936 NM_133448 AB061814	-432042	-	NM_001190971 NM_004764	2179	+	TSC_hg19_v1_chr12_+_130822635 BC028581 AF387507 AF104260 AK093133 AX747944	2369	+	AB002316 NM_015347	182156	-	BC070037|FZD10|11211|frizzled family receptor 10##NM_007197|FZD10|11211|frizzled family receptor 10##AK056047|FLJ31485|440119|uncharacterized LOC440119##BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D##NM_001190971|PIWIL1|9271|piwi-like 1 (Drosophila)##NM_004764|PIWIL1|9271|piwi-like 1 (Drosophila)##BC028581|PIWIL1|9271|piwi-like 1 (Drosophila)##AF387507|PIWIL1|9271|piwi-like 1 (Drosophila)##AF104260|PIWIL1|9271|piwi-like 1 (Drosophila)##AK093133|PIWIL1|9271|piwi-like 1 (Drosophila)##AB002316|RIMBP2|23504|RIMS binding protein 2##NM_015347|RIMBP2|23504|RIMS binding protein 2	0.994755	CTCF.p2:9:0.995
chr8	130315745	130315867	reg1013759.p1	8.937	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1509023	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1567316	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1567481	+	AB042405 NM_031415	483327	-	BC003599 TSC_hg19_v1_chr8_-_130951934	636109	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	636200	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.959468	CTCF.p2:0:0.959
chr9	42471355	42471473	reg1015087.p2	8.937	+	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	-103056	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-516500	-	BC040528 NM_001113541 NM_015667	-970736	+	NM_001099279 NM_199244	245819	+	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	662073	-	NM_001145196	1159315	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6	1.419076	CTCF.p2:1:0.981	CTCF.p2:-52:0.438
chr4	3882441	3882548	reg1014515.p1	8.936	+	J03853 NM_000683	-114199	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-114376	+	TSC_hg19_v1_chr4_-_3534154 BC105074 BC112067 AK292321 NM_002337	-348306	-	BC044637 TSC_hg19_v1_chr4_-_3957162	74661	-	BC130430 BC130432 NM_177998	346123	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	367454	-	J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC105074|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC112067|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK292321|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##NM_002337|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128	0.998848	CTCF.p2:16:0.999
chr21	10923084	10923189	reg1015021.p1	8.935	+	None	None	None	None	None	None	None	None	None	AK308254 AK314285 TSC_hg19_v1_chr21_-_10990898 AF007118 AF495908 AY219886 AY219887 AY219888 AL833345 BC028719 NM_199259 NM_199260 NM_199261	67762	-	BC101132 BC101133 BC101134 BC107038 BC107039 BC113810 AF218570 AF339514 AF339515 AF339516 NM_181704 NM_182481 NM_182482 NM_182484 AF527550 AF527551 AF527553 NM_001187 U19180 BC017024 TSC_hg19_v1_chr21_-_11098961 AK292540 BC064647	175763	-	AY172978 NM_174981 AY465173	4059363	+	AK308254|TPTE|7179|transmembrane phosphatase with tensin homology##AK314285|TPTE|7179|transmembrane phosphatase with tensin homology##AF007118|TPTE|7179|transmembrane phosphatase with tensin homology##AF495908|TPTE|7179|transmembrane phosphatase with tensin homology##AY219886|TPTE|7179|transmembrane phosphatase with tensin homology##AY219887|TPTE|7179|transmembrane phosphatase with tensin homology##AY219888|TPTE|7179|transmembrane phosphatase with tensin homology##AL833345|TPTE|7179|transmembrane phosphatase with tensin homology##BC028719|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199259|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199260|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199261|TPTE|7179|transmembrane phosphatase with tensin homology##BC101132|BAGE2|85319|B melanoma antigen family, member 2##BC101133|BAGE2|85319|B melanoma antigen family, member 2##BC101134|BAGE3|85318|B melanoma antigen family, member 3##BC107038|BAGE|574|B melanoma antigen##BC107039|BAGE|574|B melanoma antigen##BC113810|BAGE|574|B melanoma antigen##AF218570|BAGE2|85319|B melanoma antigen family, member 2##AF339514|BAGE3|85318|B melanoma antigen family, member 3##AF339515|BAGE4|85317|B melanoma antigen family, member 4##AF339516|BAGE5|85316|B melanoma antigen family, member 5##NM_181704|BAGE4|85317|B melanoma antigen family, member 4##NM_182481|BAGE3|85318|B melanoma antigen family, member 3##NM_182482|BAGE2|85319|B melanoma antigen family, member 2##NM_182484|BAGE5|85316|B melanoma antigen family, member 5##AF527550|BAGE|574|B melanoma antigen##AF527551|BAGE|574|B melanoma antigen##AF527553|BAGE|574|B melanoma antigen##NM_001187|BAGE|574|B melanoma antigen##U19180|BAGE|574|B melanoma antigen##AK292540|BAGE2|85319|B melanoma antigen family, member 2##AY172978|POTED|317754|POTE ankyrin domain family, member D##NM_174981|POTED|317754|POTE ankyrin domain family, member D##AY465173|POTEB|339010|POTE ankyrin domain family, member B	0.997937	CTCF.p2:-13:0.998
chr3	182336045	182336160	reg1014358.p2	8.935	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-905964	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-906389	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-918710	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	175185	+	AK296750 TSC_hg19_v1_chr3_+_182511291	175193	+	TSC_hg19_v1_chr3_+_182511375 AF156548	175287	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.369545	CTCF.p2:7:0.370
chr3	20553401	20553534	reg1016971.p1	8.935	+	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-325793	-	BC070075 TSC_hg19_v1_chr3_+_20081907 BC060823 AB527402	-471557	+	NM_003884 U57317	-471944	+	AK026072 NM_024697	1239348	-	AK310298 TSC_hg19_v1_chr3_-_22414124	1860667	-	TSC_hg19_v1_chr3_+_23244600 AK307075	2691116	+	AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC070075|KAT2B|8850|K(lysine) acetyltransferase 2B##BC060823|KAT2B|8850|K(lysine) acetyltransferase 2B##NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B##U57317|KAT2B|8850|K(lysine) acetyltransferase 2B##AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AK310298|ZNF385D|79750|zinc finger protein 385D##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2	0.658548	CTCF.p2:0:0.659
chr9	79626914	79627037	reg1014277.p1	8.935	+	AB535152 FJ808772 FJ808773 BC019095 NM_015225 TSC_hg19_v1_chr9_-_79521026	-106023	-	AY196297 NM_001097636	-511427	+	AY196296 NM_001097635	-533719	+	NM_001013735	7595	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	165364	+	TSC_hg19_v1_chr9_+_79792474 AB054005	165533	+	AB535152|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808772|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808773|PRUNE2|158471|prune homolog 2 (Drosophila)##BC019095|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_015225|PRUNE2|158471|prune homolog 2 (Drosophila)##AY196297|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097636|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001013735|FOXB2|442425|forkhead box B2##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)	0.993433	CTCF.p2:24:0.993
chr11	119039346	119039464	reg1013669.p1	8.934	+	TSC_hg19_v1_chr11_+_119020572 AJ308237 AJ308238 AJ300465	-18781	+	AK289830 NM_001142505	-19107	+	BC041091 NM_022169 AK290035	-19625	+	TSC_hg19_v1_chr11_+_119039454 BX647705 AB094095 BC023974 NM_024618 NM_170722 AK303002 AK291716 BC110890	42	+	NM_001168468 NM_024791 AK026409 AK091966 AK298333 AX747282 BX648391 TSC_hg19_v1_chr11_+_119056183 AK315403 BC029042 AY047359 CU688588 AB094096	16781	+	NM_001145018	27178	-	AJ308237|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##AJ308238|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##AJ300465|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##AK289830|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##NM_001142505|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##BC041091|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##NM_022169|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##AK290035|ABCG4|64137|ATP-binding cassette, sub-family G (WHITE), member 4##BX647705|NLRX1|79671|NLR family member X1##AB094095|NLRX1|79671|NLR family member X1##BC023974|NLRX1|79671|NLR family member X1##NM_024618|NLRX1|79671|NLR family member X1##NM_170722|NLRX1|79671|NLR family member X1##AK303002|NLRX1|79671|NLR family member X1##AK291716|NLRX1|79671|NLR family member X1##BC110890|NLRX1|79671|NLR family member X1##NM_001168468|PDZD3|79849|PDZ domain containing 3##NM_024791|PDZD3|79849|PDZ domain containing 3##AK026409|PDZD3|79849|PDZ domain containing 3##AK091966|PDZD3|79849|PDZ domain containing 3##AK298333|PDZD3|79849|PDZ domain containing 3##BX648391|PDZD3|79849|PDZ domain containing 3##AK315403|PDZD3|79849|PDZ domain containing 3##BC029042|PDZD3|79849|PDZ domain containing 3##AY047359|PDZD3|79849|PDZ domain containing 3##AB094096|PDZD3|79849|PDZ domain containing 3##NM_001145018|CCDC153|283152|coiled-coil domain containing 153	1.006917	CTCF.p2:11:0.988
chrX	102788492	102788600	reg1013508.p1	8.933	+	AF422143 NM_080879	-14130	-	AF187064 M38188 NM_014380	-156438	+	TSC_hg19_v1_chrX_+_102631465 AK315371 AK057859 BC051713 AY833562 BC003190	-157083	+	TSC_hg19_v1_chrX_+_102840485 NM_001006935 NM_001006937 NM_024863 AL833640 AK024827 AK225117 Z36792 AK093021 AX747862 AF271783 AY885169 BC012296	51909	+	BC008703 NM_001006933 NM_032926 BC007622 TSC_hg19_v1_chrX_+_102862898 AK098494 AF163263	74323	+	NM_001006640	95101	+	AF422143|RAB40A|142684|RAB40A, member RAS oncogene family##NM_080879|RAB40A|142684|RAB40A, member RAS oncogene family##AF187064|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##M38188|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##NM_014380|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AK315371|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AK057859|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##BC051713|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AY833562|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##BC003190|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##NM_001006935|TCEAL4|79921|transcription elongation factor A (SII)-like 4##NM_001006937|TCEAL4|79921|transcription elongation factor A (SII)-like 4##NM_024863|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AL833640|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AK024827|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AK225117|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AK093021|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AF271783|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AY885169|TCEAL4|79921|transcription elongation factor A (SII)-like 4##BC012296|TCEAL4|79921|transcription elongation factor A (SII)-like 4##BC008703|TCEAL3|85012|transcription elongation factor A (SII)-like 3##NM_001006933|TCEAL3|85012|transcription elongation factor A (SII)-like 3##NM_032926|TCEAL3|85012|transcription elongation factor A (SII)-like 3##BC007622|TCEAL3|85012|transcription elongation factor A (SII)-like 3##AK098494|TCEAL3|85012|transcription elongation factor A (SII)-like 3##AF163263|TCEAL3|85012|transcription elongation factor A (SII)-like 3##NM_001006640|TCEAL1|9338|transcription elongation factor A (SII)-like 1	0.951764	CTCF.p2:-3:0.952
chr11	122504042	122504192	reg1016512.p1	8.931	+	BC130361 BC130363 AF303179 NM_001001786	-517256	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-1043019	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-1180942	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	22430	+	BC070266 AK313578 AF001622 NM_019604	205112	+	AK097534 BC068507 NM_024806 NM_199124	249314	+	BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63	0.0	
chr15	81288704	81288840	reg1014839.p1	8.931	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	-6572	-	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	-217051	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	-300763	+	TSC_hg19_v1_chr15_+_81293344 NM_022566	4572	+	AK302120 BC062471 NM_173528 AK307565	137855	+	AK124725 NM_001172128 AK124565 AK131530	200446	+	D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##NM_022566|MESDC1|59274|mesoderm development candidate 1##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26##AK124725|IL16|3603|interleukin 16##NM_001172128|IL16|3603|interleukin 16##AK124565|IL16|3603|interleukin 16##AK131530|IL16|3603|interleukin 16	0.994394	CTCF.p2:-5:0.994
chr7	75386479	75386586	reg1014213.p1	8.931	+	TSC_hg19_v1_chr7_-_75368305 AF486833 NM_001243198 NM_005338	-18222	-	AF365404 AB385224 TSC_hg19_v1_chr7_-_75368255 AK094866 AK304738 BC110545	-18292	-	BC101598 BC143635 BC087844 BC022886 BC007683 BC014421 BC029646 TSC_hg19_v1_chr7_-_75157432 BC046153	-229347	-	NM_006072 AY358893	32606	-	AJ223461 BC069072 BC069391 NM_002991 U85768 AB590965 CU686790	56497	-	AF226732 TSC_hg19_v1_chr7_+_75508369 NM_001040456 NM_001040457 BC069017 AK026590	121802	+	AF486833|HIP1|3092|huntingtin interacting protein 1##NM_001243198|HIP1|3092|huntingtin interacting protein 1##NM_005338|HIP1|3092|huntingtin interacting protein 1##AF365404|HIP1|3092|huntingtin interacting protein 1##AK094866|HIP1|3092|huntingtin interacting protein 1##AK304738|HIP1|3092|huntingtin interacting protein 1##BC110545|HIP1|3092|huntingtin interacting protein 1##BC101598|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC143635|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC087844|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC007683|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC014421|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC046153|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##NM_006072|CCL26|10344|chemokine (C-C motif) ligand 26##AY358893|CCL26|10344|chemokine (C-C motif) ligand 26##AJ223461|CCL24|6369|chemokine (C-C motif) ligand 24##BC069072|CCL24|6369|chemokine (C-C motif) ligand 24##BC069391|CCL24|6369|chemokine (C-C motif) ligand 24##NM_002991|CCL24|6369|chemokine (C-C motif) ligand 24##U85768|CCL24|6369|chemokine (C-C motif) ligand 24##AF226732|RHBDD2|57414|rhomboid domain containing 2##NM_001040456|RHBDD2|57414|rhomboid domain containing 2##NM_001040457|RHBDD2|57414|rhomboid domain containing 2##BC069017|RHBDD2|57414|rhomboid domain containing 2##AK026590|RHBDD2|57414|rhomboid domain containing 2	0.038771	
chr9	112083353	112083502	reg1013580.p1	8.931	+	TSC_hg19_v1_chr9_-_112083330 AB032179	-137	-	TSC_hg19_v1_chr9_-_112083007 AF153416 AF153418 NM_018424 NM_019114	-415	-	TSC_hg19_v1_chr9_-_111929489 AF155065 NM_014334	-153898	-	AK296265 AK296388 AK316118 NM_001145371 NM_001145372	107786	-	BX648253 NM_001145369 NM_001145370	130236	-	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	177162	-	AB032179|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF153416|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF153418|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_018424|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_019114|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF155065|C9orf4|23732|chromosome 9 open reading frame 4##NM_014334|C9orf4|23732|chromosome 9 open reading frame 4##AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BX648253|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145369|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145370|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	0.990884	CTCF.p2:-36:0.991
chr3	11376591	11376694	reg1009322.p1	8.930	+	AK314504 TSC_hg19_v1_chr3_+_11314092 BC000091 AF094516	-62546	+	AK298833 TSC_hg19_v1_chr3_+_11314082 AK075221 AK303694	-62565	+	TSC_hg19_v1_chr3_+_11314033 NM_001136031 NM_001144912 NM_006395	-62636	+	TSC_hg19_v1_chr3_-_11610264 AK308761 NM_001128221	233688	-	AK307708 TSC_hg19_v1_chr3_-_11623831 NM_001128220	247191	-	TSC_hg19_v1_chr3_-_11685397 NM_001128219	308754	-	AK314504|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##BC000091|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AF094516|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK298833|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK075221|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK303694|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_001136031|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_001144912|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_006395|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK308761|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128221|VGLL4|9686|vestigial like 4 (Drosophila)##AK307708|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)	0.971146	CTCF.p2:32:0.971
chrX	16713327	16713473	reg1017261.p1	8.930	+	L13220 NM_004057 X65869 BC112174	-45103	+	NM_005314	-571977	+	TSC_hg19_v1_chrX_-_15873104 NM_003916	-840297	-	AK125332 NM_001144002	16939	-	TSC_hg19_v1_chrX_-_16730802 NM_175859 BC034986 AK125348 AF226667 AK024070 AK023549 NM_019857	17463	-	TSC_hg19_v1_chrX_+_16737703 NM_032796 CR749849	24291	+	L13220|S100G|795|S100 calcium binding protein G##NM_004057|S100G|795|S100 calcium binding protein G##X65869|S100G|795|S100 calcium binding protein G##BC112174|S100G|795|S100 calcium binding protein G##NM_005314|GRPR|2925|gastrin-releasing peptide receptor##NM_003916|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK125332|CTPS2|56474|CTP synthase II##NM_001144002|CTPS2|56474|CTP synthase II##NM_175859|CTPS2|56474|CTP synthase II##BC034986|CTPS2|56474|CTP synthase II##AK125348|CTPS2|56474|CTP synthase II##AF226667|CTPS2|56474|CTP synthase II##AK024070|CTPS2|56474|CTP synthase II##AK023549|CTPS2|56474|CTP synthase II##NM_019857|CTPS2|56474|CTP synthase II##NM_032796|SYAP1|94056|synapse associated protein 1##CR749849|SYAP1|94056|synapse associated protein 1	0.998047	CTCF.p2:0:0.708	CTCF.p2:-86:0.290
chr2	156672499	156672631	reg1015391.p1	8.929	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-1117376	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-1944121	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-2337314	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	514125	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	516598	-	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	619393	+	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	0.05921	
chr3	190142289	190142416	reg1016982.p1	8.929	+	AK314955 NM_006580	-36692	+	BC012471 AF114837 AY358652 AF101051 AF134160 AK312866 AK225963 AK296934 TSC_hg19_v1_chr3_-_190040231 NM_021101	-102138	-	NM_001134418	-302127	-	CU687168 BC071780 AY358607 NM_207316	25278	-	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	89525	+	NM_001146686	438112	-	AK314955|CLDN16|10686|claudin 16##NM_006580|CLDN16|10686|claudin 16##BC012471|CLDN1|9076|claudin 1##AF114837|CLDN1|9076|claudin 1##AY358652|CLDN1|9076|claudin 1##AF101051|CLDN1|9076|claudin 1##AF134160|CLDN1|9076|claudin 1##AK312866|CLDN1|9076|claudin 1##AK296934|CLDN1|9076|claudin 1##NM_021101|CLDN1|9076|claudin 1##NM_001134418|LEPREL1|55214|leprecan-like 1##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207##NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001146686|GMNC|647309|geminin coiled-coil domain containing	0.94952	CTCF.p2:4:0.950
chrX	69653742	69653886	reg1015213.p1	8.929	+	NM_001171191 NM_001171192 NM_001171193 NM_017711 AB048363 AK299255 AK310090 AK301025 AK316035 AK000214 AK307778 BC032009 AY358986	-10782	+	NM_012310 AK313133 BC003664 BC038459 AF071592 BC049218 AB208797 BC050548 BC011801	-143883	+	TSC_hg19_v1_chrX_-_69509768 BC012996 AY358829 AK024746 AK311539 AF151061 NM_016484 BX537725	-144022	-	AB209328 NM_021120 AK315041 U49089	10947	+	TSC_hg19_v1_chrX_+_69672143 AB033058 NM_020730	18361	+	TSC_hg19_v1_chrX_+_69672415 AK304020 AK316518	18592	+	NM_001171191|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##NM_001171192|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##NM_001171193|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##NM_017711|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AB048363|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AK299255|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AK310090|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AK301025|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AK316035|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AK000214|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AK307778|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##BC032009|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AY358986|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##NM_012310|KIF4A|24137|kinesin family member 4A##AK313133|KIF4A|24137|kinesin family member 4A##BC003664|KIF4A|24137|kinesin family member 4A##BC038459|KIF4A|24137|kinesin family member 4A##AF071592|KIF4A|24137|kinesin family member 4A##BC049218|KIF4A|24137|kinesin family member 4A##AB208797|KIF4A|24137|kinesin family member 4A##BC050548|KIF4A|24137|kinesin family member 4A##BC011801|KIF4A|24137|kinesin family member 4A##BC012996|PDZD11|51248|PDZ domain containing 11##AY358829|PDZD11|51248|PDZ domain containing 11##AK024746|PDZD11|51248|PDZ domain containing 11##AK311539|PDZD11|51248|PDZ domain containing 11##AF151061|PDZD11|51248|PDZ domain containing 11##NM_016484|PDZD11|51248|PDZ domain containing 11##BX537725|PDZD11|51248|PDZ domain containing 11##AB209328|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_021120|DLG3|1741|discs, large homolog 3 (Drosophila)##AK315041|DLG3|1741|discs, large homolog 3 (Drosophila)##U49089|DLG3|1741|discs, large homolog 3 (Drosophila)##AB033058|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_020730|DLG3|1741|discs, large homolog 3 (Drosophila)##AK304020|DLG3|1741|discs, large homolog 3 (Drosophila)##AK316518|DLG3|1741|discs, large homolog 3 (Drosophila)	0.994347	CTCF.p2:3:0.994
chrX	73602649	73602797	reg1016519.p1	8.929	+	BC021176 NM_203303 TSC_hg19_v1_chrX_+_73524041 EU446947 EU831786 EU831864 CU676854	-78661	+	TSC_hg19_v1_chrX_-_73513379 AK311345	-89349	-	TSC_hg19_v1_chrX_-_73512419 AK057701	-90318	-	NM_006517 TSC_hg19_v1_chrX_+_73641331 U05315 AB085789	38523	+	AF155109 TSC_hg19_v1_chrX_-_73834424 BC013357	231694	-	BC002451 TSC_hg19_v1_chrX_-_73834428	231705	-	BC021176|ZCCHC13|389874|zinc finger, CCHC domain containing 13##NM_203303|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU446947|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831786|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831864|ZCCHC13|389874|zinc finger, CCHC domain containing 13##AK311345|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##AK057701|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##NM_006517|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##U05315|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##AB085789|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##AF155109|RLIM|51132|ring finger protein, LIM domain interacting##BC013357|RLIM|51132|ring finger protein, LIM domain interacting	0.998906	CTCF.p2:-11:0.999
chr2	219938243	219938353	reg1014011.p2	8.928	+	BC136587 BC136588 NM_002181	-13061	-	AK127189 AK302678 AK302688 BC031585 NM_152389 NM_194302 BC047637	-32056	-	AF166331 NM_005209 BC006285 NM_057093 NM_057094	-80175	-	TSC_hg19_v1_chr2_-_220025558 BC012732 AK022672 AJ972687 BC030986 NM_024782	87241	-	DQ891019 DQ894199 CU688862 AK091919 BC030243 AK298256 AK298277 AK055730 NM_001144889 NM_001144890 NM_144712	96463	-	CR457401 CU674686 AK311656 TSC_hg19_v1_chr2_-_220041648 BC001393 AK314975 AK075274 BC012821 AY007160 NM_015680	103329	-	BC136587|IHH|3549|Indian hedgehog##BC136588|IHH|3549|Indian hedgehog##NM_002181|IHH|3549|Indian hedgehog##AK127189|CCDC108|255101|coiled-coil domain containing 108##AK302678|CCDC108|255101|coiled-coil domain containing 108##AK302688|CCDC108|255101|coiled-coil domain containing 108##BC031585|CCDC108|255101|coiled-coil domain containing 108##NM_152389|CCDC108|255101|coiled-coil domain containing 108##NM_194302|CCDC108|255101|coiled-coil domain containing 108##BC047637|CCDC108|255101|coiled-coil domain containing 108##AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2##BC012732|NHEJ1|79840|nonhomologous end-joining factor 1##AK022672|NHEJ1|79840|nonhomologous end-joining factor 1##AJ972687|NHEJ1|79840|nonhomologous end-joining factor 1##BC030986|NHEJ1|79840|nonhomologous end-joining factor 1##NM_024782|NHEJ1|79840|nonhomologous end-joining factor 1##DQ891019|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##DQ894199|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##BC030243|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298256|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298277|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK055730|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144889|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144890|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_144712|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##CR457401|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC001393|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK314975|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK075274|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC012821|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AY007160|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##NM_015680|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1	0.0	
chr7	154705536	154705684	reg1016531.p1	8.928	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	-703225	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	-955852	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	-1121210	+	TSC_hg19_v1_chr7_+_154720213 BC033053 AK311721 AK056609 BC050402	14587	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	89060	-	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	89601	+	AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##BC033053|LOC100132707|100132707|uncharacterized LOC100132707##AK311721|LOC100132707|100132707|uncharacterized LOC100132707##AK056609|LOC100132707|100132707|uncharacterized LOC100132707##BC050402|LOC100132707|100132707|uncharacterized LOC100132707##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781	1.365948	CTCF.p2:-4:1.000	CTCF.p2:-79:0.366
chr10	51984243	51984336	reg1014342.p1	8.927	+	NM_018232	-146404	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-156567	+	TSC_hg19_v1_chr10_+_51827685 BC150611 AK001686 NM_001005751 AK295129	-156609	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	24051	-	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	399414	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	515421	+	NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##BC150611|FAM21C|253725|family with sequence similarity 21, member C##AK001686|FAM21A|387680|family with sequence similarity 21, member A##NM_001005751|FAM21A|387680|family with sequence similarity 21, member A##AK295129|FAM21A|387680|family with sequence similarity 21, member A##AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B	0.862775	CTCF.p2:-7:0.863
chr5	80721428	80721608	reg1013926.p2	8.927	+	BC075011 BC075010 AK122960 AB078619 BC089437 NM_130767 TSC_hg19_v1_chr5_-_80690052	-31516	-	NM_001131035 NM_001131036 NM_032280 AL512712 TSC_hg19_v1_chr5_+_80597439 BC032736 AK314160 BC022799 BC014841	-124079	+	AK092460 TSC_hg19_v1_chr5_-_80597373 AK096680	-124146	-	TSC_hg19_v1_chr5_-_81046929 AB528651 CU677799 DQ891620 DQ894812 EU176592 EU831646 EU831730 AK293544 AK074537 AK294864 AK297494 AF161465 AF077048 AK299858 AK312337 CR936787 AL080076 BC017020	325381	-	TSC_hg19_v1_chr5_-_81046990 NM_012446	325590	-	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	546327	+	BC075011|ACOT12|134526|acyl-CoA thioesterase 12##BC075010|ACOT12|134526|acyl-CoA thioesterase 12##AK122960|ACOT12|134526|acyl-CoA thioesterase 12##AB078619|ACOT12|134526|acyl-CoA thioesterase 12##BC089437|ACOT12|134526|acyl-CoA thioesterase 12##NM_130767|ACOT12|134526|acyl-CoA thioesterase 12##NM_001131035|ZCCHC9|84240|zinc finger, CCHC domain containing 9##NM_001131036|ZCCHC9|84240|zinc finger, CCHC domain containing 9##NM_032280|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AL512712|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC032736|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AK314160|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC022799|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC014841|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AK092460|LOC100131067|100131067|uncharacterized LOC100131067##AK096680|LOC100131067|100131067|uncharacterized LOC100131067##DQ891620|SSBP2|23635|single-stranded DNA binding protein 2##DQ894812|SSBP2|23635|single-stranded DNA binding protein 2##EU176592|SSBP2|23635|single-stranded DNA binding protein 2##EU831646|SSBP2|23635|single-stranded DNA binding protein 2##EU831730|SSBP2|23635|single-stranded DNA binding protein 2##AK293544|SSBP2|23635|single-stranded DNA binding protein 2##AK074537|SSBP2|23635|single-stranded DNA binding protein 2##AK294864|SSBP2|23635|single-stranded DNA binding protein 2##AK297494|SSBP2|23635|single-stranded DNA binding protein 2##AF161465|SSBP2|23635|single-stranded DNA binding protein 2##AF077048|SSBP2|23635|single-stranded DNA binding protein 2##AK299858|SSBP2|23635|single-stranded DNA binding protein 2##AK312337|SSBP2|23635|single-stranded DNA binding protein 2##CR936787|SSBP2|23635|single-stranded DNA binding protein 2##AL080076|SSBP2|23635|single-stranded DNA binding protein 2##BC017020|SSBP2|23635|single-stranded DNA binding protein 2##NM_012446|SSBP2|23635|single-stranded DNA binding protein 2##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)	0.557933	CTCF.p2:-20:0.558
chr13	115105385	115105524	reg1013874.p1	8.926	+	TSC_hg19_v1_chr13_+_115080005 NM_001164144 NM_001164145 NM_032436 AK096346 BC065237	-25468	+	TSC_hg19_v1_chr13_+_115047085 AY013250 NM_023011 NM_080687 BC023569 BC047735 AK294545 AK302003 AF318575	-58340	+	TSC_hg19_v1_chr13_+_115000402 AK296424 BC017244 BC010875 AK315302 U18291 AB590520 AF164598 CU677877	-104992	+	None	None	None	None	None	None	None	None	None	NM_001164144|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##NM_001164145|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##NM_032436|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##AK096346|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##BC065237|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##AY013250|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_023011|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_080687|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC023569|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC047735|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK294545|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK302003|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AF318575|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK296424|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC017244|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC010875|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AK315302|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##U18291|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AF164598|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)	0.980068	CTCF.p2:10:0.980
chr13	25659428	25659558	reg1016401.p1	8.926	+	TSC_hg19_v1_chr13_-_25497054 NM_018451	-162424	-	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	-162524	-	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	-321174	+	NM_030979 AL136900 AK313336 BC045608 BC027617 AF132026 DQ892103 DQ895297	10812	+	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	86167	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	86324	-	NM_018451|CENPJ|55835|centromere protein J##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##NM_030979|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AL136900|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK313336|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC045608|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC027617|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AF132026|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ892103|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ895297|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A	0.090778	
chr14	107183288	107183402	reg1011999.p1	8.926	+	FJ840101 FJ840103 FJ840105 FJ840106 FJ840110 FJ840116 FJ840119 FJ840153 FJ840184 FJ840185 FJ840188 FJ840189 FJ840190 FJ840192 FJ840197 FJ840199 FJ840203 FJ840206 FJ840207 FJ840208 FJ840209 FJ873863 FJ873875 FJ873894 FJ873921 FJ873929 FJ873938 FJ873947 FJ873950 FJ873952 FJ873965 FJ873977 FJ873996 FJ873997 FJ873999 FJ874008 FJ874014 FJ874026 FJ874040 FJ874044 FJ874061 FJ874068 FJ874078 FJ874079 FJ874080 HM116116 HM116121 HM116146 HM116172 HM116181 HM116193 HM116196 HM116197 HM116201 HM116225 GQ232804 GQ232899 AY003747 AY392896 AY393031 AY393032 AY393052 AY393293 AY393389 AY393434 AY393562 AF103042 AF459629 HM774620 HM774632 AM183987 AM279526 AY312400 EF177989 DQ926546 AJ389183 DQ100956 DQ926096 U00507 AB066845 AB066846 AB066847 AB066848 AB066849 AB066853 AB066854 AB066855 AB066856 AB066860 AB066863 AB066867 AB066872 AB066875 AB066876 AB067169 AB067183 AB067187 AB067188 AB067191 AB067197 AB067198 AB067200 AB067201 AB067203 AB067204 AB067205 AB067206 AB067207 AB067208 AB067209 AB067210 AB067211 AB067212 AB067213 AB067215 AB067216 AB067217 AB067219 AB067220 AB067227 AB067230 AF062247 AF174045 AF174063 AF174117 AF442758 AJ239338 AJ239347 AJ389184 AY781820 AY941845 DQ926224 DQ926451 FJ385297 GU570281 GU570282 HQ378332 U00575 U77371 X79160 Z80836 DQ535270 DQ535432 L28050 M34027 AF062153 AJ131058 AY190826 L21960 TSC_hg19_v1_chr14_-_107179280 AK097955	-4155	-	M87789 L29121 BC069016 L08086 AK123800 BC025314 BC026038 AK131045 AK126133 AK130642 TSC_hg19_v1_chr14_-_107170426 AK097360 AK097364 AK128394 AK307688 BC016381 AK096985 AK097305 AK097356 AK123070 AK129512 AK129622 AK129777 AK130786 AK131065 BC070333 AK097361 AK097363 AK058027 AK129809	-12930	-	AY179836 AY179838 AY179841 AY179844 AY179846 AY179847 AY179848 AY179850 AY179854 AY179855 AY179856 AY179858 AY179860 AY003797 DQ454801 EF583677 EU099154 EU099192 AY003810 DQ454853 AY003779 DQ454620 DQ523910 GU552683 AY003802 AY003865 DQ454802 DQ454808 DQ454937 GU552691 GU552774 HM773974 FJ873961 EF441761 DQ454821 AY996332 FJ840044 FJ840053 FJ840143 FJ840193 FJ840194 FJ840196 FJ840204 FJ840239 FJ873866 FJ873869 FJ873895 FJ873936 FJ874043 GQ232929 HM116184 EF583683 EF175392 EU099153 GQ232967 GU358675 EF583681 EU099116 GU358674 JF810254 EF091907 EF175405 EU667599 EF091906 EF091908 EF091909 EF091910 EF175388 EF175390 EF175395 EF175406 EF175412 EF175417 EF175418 EF175420 EF175428 EF407848 EF441755 EU099106 EU350411 EU350412 EU433866 EU433872 EU433873 EU433879 EU667594 EU667595 EU667596 EU667597 EU667598 EU814958 EU814959 EU814960 EU814963 EU814966 FJ694873 FJ694874 GQ232838 GQ232965 GU358670 GU358676 GU358678 GU358682 JF810255 JF810274 AF103216 EF175425 EF583662 EF583663 EF583664 EF583665 EF583667 EF583673 EF583674 EF583675 EF583682 EU350410 M35478 EF407834 EF566907 EF407828 EF407830 EF583660 DQ100847 AY998726 AF209884 AJ007325 EF473862 EU099204 U86786 U86795 U86797 AF308545 AF308549 AF308553 AF308554 AF308559 AF308560 AF308561 EU090245 GQ903485 GQ903489 GQ903492 EU099120 GQ903503 AJ239384 EU099100 EU099208 Z80841 AF103052 AF103307 EU099086 EU099105 EU099142 EU099250 EU099176 EU099293 HM774304 AY515008 EU099141 EU099212 JN110763 JN110845 JN110914 JN111163 L04334 L04335 L04344 FJ385405 FJ385410 FJ385424 FJ385430 FJ385431 HM774065 HM774083 HM774091 HM774102 HM774365 HM774646 HM774653 HM774656 HM774681 HM774757 HM774769 HM774771 HM774786 HM774863 HM774965 HM775047 AF103339 AY515006 DQ523992 EU099090 EU099092 EU099115 EU099162 EU099179 EU099210 EU099218 EU099282 DQ097895 EF624069 EF624074 EF624075 EF624077 EF624128 EF624129 EF624130 EF624131 EF624138 EF624140 EF624141 EF624143 EF624174 EF624175 EF624176 EF624177 EF624179 EF624180 EF624182 EF624183 EF624184 EF624185 EF624186 EF624187 EF624188 EF624189 EF624190 EF624191 EF624192 EF624193 EU099060 EU099066 EU099128 EU099129 EU099145 EU099158 EU099160 EU099161 EU099165 EU099177 EU099178 EU099180 EU099247 EU146320 EU146330 EU146331 EU146336 EU146348 EU146349 EU146350 EU146351 EU146352 EU146353 EU146354 EU146355 EU146356 EU146357 EU146359 EU146383 EU146385 EU146386 M98324 AY393263 AY393515 DQ524120 EU090241 EU099081 EU099095 EU099099 EU099103 EU099111 EU099121 EU099135 EU099136 EU099164 EU099170 EU099174 EU099189 EU099205 EU099207 EU099209 EU099220 AF306353 AJ132852 AM259138 L12098 AF035025 AY392856 AY392858 AY393000 AY393010 AY393106 AY393123 AY393128 AY393133 AY393135 AY393137 AY393138 AY393233 AY393338 AY393342 AY393350 AY393373 AY393495 AY393496 AY393501 AY393503 AY393504 AY393508 AY393513 AY393514 AY393516 AY393517 AY393518 AY393519 AY393520 AY393522 AY393523 AY393525 AY393528 AY393532 AY393535 AY393538 AY393539 AY393540 AY393541 AY393542 AY393543 AY393544 AY393545 AY393546 AY393604 AY393611 AY393682 DQ100913 EU099069 EU099072 EU099083 EU099117 EU099138 EU099167 EU099168 EU099171 EU099175 EU099188 EU099198 EU099201 EU099202 EU099211 EU099219 EU099236 HM994945 AY574947 AY093586 AY093587 DQ100805 DQ100924 JN158773 AY093585 AF035785 AF098366 AY781822 DQ100688 DQ523989 HM995306 U00502 DQ100709 DQ100908 DQ523957 DQ524013 DQ524031 DQ524041 DQ524127 HM994992 HM994994 HM994997 HM994998 HM995013 HM995114 HM995174 HM995178 HM995180 HM995227 HM995241 HM995248 HM995283 HM995304 HM995307 HM995375 HM995447 HM995450 HM995512 HM995517 HM995520 HM995558 HM995678 HM995679 HM995680 HM995681 HM995682 HM995683 HM995684 HM995685 HM995744 HM996065 HM996269 HM996387 AF004321 AB063837 AB063906 AB063914 AB067012 AB067013 AB067018 AB067022 AB067235 AB363092 AF099200 AF174076 AY781868 AY866799 AY941859 DQ065663 DQ065677 DQ065701 DQ840709 DQ926327 EF178030 FJ195540 FJ385306 FJ385381 GQ856069 GQ903493 GQ903497 GQ903502 GQ903514 Z92894 AB027437 AB063666 AB063701 AB063715 AB063720 AB063763 AB063768 AB063778 AB063780 AB063785 AB063831 AB063902 AB063903 AB063921 AB066830 AB066835 AB066837 AB066840 AB066841 AB066842 AB066843 AB066928 AB066936 AB066939 AB066942 AB066944 AB066948 AB066949 AB066953 AB067158 AB067170 AB067305 AB067309 AB067333 AB067383 AB363078 AB363086 AB363094 AB363097 AB373608 AF021950 AF021951 AF021952 AF021970 AF021992 AF035784 AF062098 AF062127 AF062189 AF062216 AF062283 AF115114 AF115115 AF115116 AF115118 AF115119 AF174042 AF174065 AF174069 AF174073 AF174096 AF174109 AF174126 AF193848 AF217789 AF408721 AF460964 AF460965 AJ239346 AJ239357 AJ239365 AJ239372 AJ239376 AJ389170 AJ389172 AJ389179 AJ389181 AJ413995 AJ414000 AJ414001 AJ414002 AJ414004 AJ414008 AJ414009 AJ414010 AJ414015 AJ414017 AJ414020 AJ414021 AJ414023 AJ414027 AJ416562 AJ555258 AJ555262 AJ555275 AM040567 AY033246 AY055485 AY059634 AY281328 AY281329 AY466503 AY485361 AY553640 AY557623 AY557624 AY557625 AY557626 AY557627 AY561708 AY577304 AY781812 AY927666 AY941846 AY941940 D16837 DQ100681 DQ100723 DQ100733 DQ100777 DQ100808 DQ100811 DQ100820 DQ100839 DQ100902 DQ100906 DQ100912 DQ100952 DQ212523 DQ490739 DQ926531 EF555585 EF624068 EF624070 EF624071 EF624072 EF624073 EF624078 EF624079 EF624132 EF624136 EF624178 EF624181 EF624194 EF624195 EU202446 EU202448 EU835547 EU835554 FJ039781 FJ039784 FJ385379 GQ903484 GQ903486 GQ903487 GQ903490 GQ903491 GQ903495 GQ903496 GQ903498 GQ903500 GQ903501 GQ903504 GQ903507 GQ903509 GQ903511 GU570264 GU570271 GU570274 HM152493 HM152496 HM152502 HM152504 HM152527 HQ378401 HQ392874 HQ689778 HQ689781 JN158782 JN159449 JN159454 L14454 L23519 S73955 U00518 U00550 U00583 U71105 U85240 U89903 X64237 X67903 Z18841 Z34906 Z34908 Z34957 Z34959 Z34960 Z34961 Z34962 Z34963 AY927663 JN158517 DQ535261 DQ535284 DQ535416 DQ535445 DQ535451 DQ535460 EF177997 EF178006 EF178014 GU570268 Z35123 M18516 AF062105 AF062117 AF062156 AF062161 AF062175 AF062193 AF062198 AF062208 AF174026 AY172957 L06923 M62723 X65889 Z14214 Z47222 Z47224 Z47227 Z47233 Z47244 Z47245 Z47246 Z47247 Z47248 Z47249 Z47250 Z47251 Z47252 Z47253 Z47254 Z47255 Z47256 Z47257 Z47258 Z47259 Z47260 Z47261 Z47262 Z47263 Z47264 Z47265 Z47266 Z47267 Z47268 Z47269 Z47270 Z47271 Z47272 Z47273 Z80837 Z80853 CU688244 L23561 M24669 M24670 TSC_hg19_v1_chr14_-_107170387 BC062336	-13110	-	JF810265 DQ454799 FJ840007 FJ840015 DQ454561 DQ454955 DQ454612 DQ454663 DQ454685 FJ840092 FJ840295 FJ873837 AJ008218 JF810272 JF810273 AY003862 AJ132562 Y08732 AF103327 EU099062 EU620029 GQ504979 HQ392897 AF103116 AF103087 AF103100 HM774925 JN110942 HM774229 FJ385350 GQ504960 HM774112 HM774402 HM774448 HM774462 HM774524 HM774766 HM775010 AF103135 HM774927 HM774932 HM774189 U00529 Y14940 AF103057 AF103351 EU146338 L03141 L03153 AF029328 AF485459 DQ431489 L03143 L03173 L03177 AF035801 AY423195 AY423198 AY423206 DQ431488 DQ431492 HM995020 DQ431490 GU570297 HM152513 HM994969 HM994972 HM994977 HM994978 HM994981 HM994982 HM994989 HM995522 HM995532 HM996141 HM996526 DQ187603 DQ187629 DQ322887 DQ322888 DQ322889 DQ322890 DQ322960 DQ840663 DQ840674 DQ840675 DQ840677 DQ840678 DQ840680 DQ840681 DQ840682 DQ840683 DQ840687 DQ840758 DQ840769 DQ840770 DQ840771 DQ840773 DQ840781 DQ840844 DQ840857 DQ840859 DQ840860 DQ840863 DQ840910 DQ840917 DQ840918 AF021973 AF048774 AF115122 AF151702 AF174111 AJ238039 AJ579199 AJ579279 AY866726 AY866767 DQ100754 DQ100773 DQ100787 DQ100849 DQ100977 DQ840729 DQ926055 DQ926218 DQ926255 DQ926308 EF177956 EF178021 GQ267831 U96395 X99352 Y17142 AB063699 AB063849 AB063916 AB067258 AB363156 AF021945 AF129753 AF471200 AF471528 AF471540 AF471541 AF471542 AF471546 AJ300788 AJ389185 AJ556647 AJ556667 AJ579161 AY554174 AY554177 AY554178 AY573190 AY640527 AY640562 AY846273 AY971106 D83679 DQ065693 DQ535269 DQ535318 DQ535335 DQ535453 DQ535464 DQ535482 DQ926153 DQ926492 EF178117 EF178127 EF178131 EU835555 FJ195515 FJ492899 FN563769 GU570345 GU570350 HQ378386 JF806284 U97244 X99353 L33033 Z11950 BC033178 TSC_hg19_v1_chr14_-_107199472	15955	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	27956	-	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	35653	-	AK097955|IGHA1|3493|immunoglobulin heavy constant alpha 1##M87789|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC069016|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123800|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC025314|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC026038|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126133|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK130642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097360|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097364|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128394|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016381|IGHM|3507|immunoglobulin heavy constant mu##AK096985|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097305|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097356|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123070|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129512|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129622|IGHM|3507|immunoglobulin heavy constant mu##AK129777|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK131065|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC070333|IGHV1-69|28461|immunoglobulin heavy variable 1-69##AK097361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097363|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058027|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129809|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF035025|IGHV1-69|28461|immunoglobulin heavy variable 1-69##BC062336|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC033178|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu	0.999697	CTCF.p2:-14:1.000
chr18	70803481	70803628	reg1017476.p1	8.926	+	AF448838 BC050329 NM_001201465 NM_138966	-268745	-	AF448839 NM_138999	-270621	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	-591824	-	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	1011473	-	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	1012240	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	1155625	-	AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_182511|CBLN2|147381|cerebellin 2 precursor##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15##NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)	0.975454	CTCF.p2:7:0.975
chr3	40032175	40032291	reg1013407.p1	8.926	+	TSC_hg19_v1_chr3_+_39851138 BC092512 AK126013 AF396687 NM_015460 BC109311 BC109312	-181058	+	NM_182935 BC075796 AK127034 AK290187 BC022471	-523114	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	-583091	+	BC031275 AK057627 AK309874 AK309698 TSC_hg19_v1_chr3_-_40351022 BC045736 BC118565 BC106900	318835	-	NM_005875 TSC_hg19_v1_chr3_+_40351187 AK223448 BC006996 AF077052	318947	+	TSC_hg19_v1_chr3_+_40351197 AF263452	318973	+	BC092512|MYRIP|25924|myosin VIIA and Rab interacting protein##AK126013|MYRIP|25924|myosin VIIA and Rab interacting protein##AF396687|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_015460|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109311|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109312|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA##BC031275|FLJ33065|440952|uncharacterized LOC440952##AK057627|FLJ33065|440952|uncharacterized LOC440952##AK309874|FLJ33065|440952|uncharacterized LOC440952##BC045736|FLJ33065|440952|uncharacterized LOC440952##BC118565|FLJ33065|440952|uncharacterized LOC440952##BC106900|FLJ33065|440952|uncharacterized LOC440952##NM_005875|EIF1B|10289|eukaryotic translation initiation factor 1B##AK223448|EIF1B|10289|eukaryotic translation initiation factor 1B##BC006996|EIF1B|10289|eukaryotic translation initiation factor 1B##AF077052|EIF1B|10289|eukaryotic translation initiation factor 1B##AF263452|EIF1B|10289|eukaryotic translation initiation factor 1B	0.997192	CTCF.p2:23:0.997
chr6	41769284	41769420	reg1016828.p1	8.926	+	BC107435 AF216754 TSC_hg19_v1_chr6_+_41755425 BC018624 BC067252 BC022274 AB435319 L34839	-13919	+	TSC_hg19_v1_chr6_+_41755397 BC015975	-13963	+	NM_001134493	-14172	+	TSC_hg19_v1_chr6_-_41863114 BC014176 NM_018561	93749	-	AK097385 EU446931 AB463862 BC040950 AK023092 AF097725 BC032552 TSC_hg19_v1_chr6_-_41888856 AK293412	119416	-	TSC_hg19_v1_chr6_-_41888858 BC019866 AK300573 AK307070 BC012618 NM_004275	119522	-	BC107435|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AF216754|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC018624|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC067252|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC022274|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AB435319|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##L34839|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC015975|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##NM_001134493|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC014176|USP49|25862|ubiquitin specific peptidase 49##NM_018561|USP49|25862|ubiquitin specific peptidase 49##AK097385|MED20|9477|mediator complex subunit 20##EU446931|MED20|9477|mediator complex subunit 20##BC040950|MED20|9477|mediator complex subunit 20##AK023092|MED20|9477|mediator complex subunit 20##AF097725|MED20|9477|mediator complex subunit 20##BC032552|MED20|9477|mediator complex subunit 20##AK293412|MED20|9477|mediator complex subunit 20##BC019866|MED20|9477|mediator complex subunit 20##AK300573|MED20|9477|mediator complex subunit 20##AK307070|MED20|9477|mediator complex subunit 20##BC012618|MED20|9477|mediator complex subunit 20##NM_004275|MED20|9477|mediator complex subunit 20	0.054451	
chr22	20373335	20373465	reg1016347.p1	8.925	+	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	-65831	-	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	-117633	-	NM_001243537	-235970	-	NM_001242313	4268	+	BC072398 TSC_hg19_v1_chr22_-_20427830	54430	-	NM_015672	88385	-	CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##NM_001243537|LOC388849|388849|uncharacterized LOC388849##NM_001242313|TMEM191B|728229|transmembrane protein 191B##BC072398|PI4KAP1|728233|phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1##NM_015672|RIMBP3|85376|RIMS binding protein 3	0.685857	CTCF.p2:7:0.686
chr5	156736184	156736351	reg1013861.p2	8.925	+	BC011762 BC021008 NM_014376	-39911	+	TSC_hg19_v1_chr5_+_156693105 AL136549 NM_001037333 AK294220 AK295865 AK297401 AK303702 AB032994 AF160973 NM_001037332	-43015	+	BC094701 AB209622 D13720 NM_005546 BC109077 BC109078 AK312846 AK303609 AB590549	-128350	+	AK289701 BC022570 NM_001001343	36433	-	TSC_hg19_v1_chr5_+_156820161 AK172724	83921	+	AK296972 NM_001099287 NM_001172292	150759	+	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB209622|ITK|3702|IL2-inducible T-cell kinase##D13720|ITK|3702|IL2-inducible T-cell kinase##NM_005546|ITK|3702|IL2-inducible T-cell kinase##BC109077|ITK|3702|IL2-inducible T-cell kinase##BC109078|ITK|3702|IL2-inducible T-cell kinase##AK312846|ITK|3702|IL2-inducible T-cell kinase##AK303609|ITK|3702|IL2-inducible T-cell kinase##AK289701|FNDC9|408263|fibronectin type III domain containing 9##BC022570|FNDC9|408263|fibronectin type III domain containing 9##NM_001001343|FNDC9|408263|fibronectin type III domain containing 9##AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK296972|NIPAL4|348938|NIPA-like domain containing 4##NM_001099287|NIPAL4|348938|NIPA-like domain containing 4##NM_001172292|NIPAL4|348938|NIPA-like domain containing 4	0.802373	CTCF.p2:24:0.802
chr6_mann_hap4	4439873	4440014	reg1014699.p1	8.925	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.982461	CTCF.p2:-31:0.982
chr1	248859677	248859799	reg1013495.p1	8.924	+	NM_001004734 BC137188 BC137189	-14122	-	NM_001001824	-45554	-	NM_001001827 AB528813	-57179	-	AY358453 TSC_hg19_v1_chr1_-_249120082 AK056382 NM_030645	260370	-	TSC_hg19_v1_chr1_+_249132449 BC029310	272719	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	272807	+	NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##NM_001001824|OR2T27|403239|olfactory receptor, family 2, subfamily T, member 27##NM_001001827|OR2T35|403244|olfactory receptor, family 2, subfamily T, member 35##AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like##AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like##BC029310|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672	0.985042	CTCF.p2:0:0.985
chr16	89976824	89976953	reg1015470.p1	8.924	+	TSC_hg19_v1_chr16_+_89940021 BC011884 AK024679 BC009349 BC000959 AB528245 AB587412 CU674474 CU679309 EU446609	-36842	+	TSC_hg19_v1_chr16_+_89940003 NM_014972 AK301053	-36885	+	TSC_hg19_v1_chr16_+_89894882 BC111030 NM_032451 AJ422077 BC011119	-81983	+	AK024232 NM_002386	7398	+	TSC_hg19_v1_chr16_+_89985278 AK225902 AK054666 BC007856	8389	+	AK292219 NM_001197181	11528	+	BC011884|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##AK024679|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##BC009349|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##BC000959|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##EU446609|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##NM_014972|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##AK301053|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##BC111030|SPIRE2|84501|spire homolog 2 (Drosophila)##NM_032451|SPIRE2|84501|spire homolog 2 (Drosophila)##AJ422077|SPIRE2|84501|spire homolog 2 (Drosophila)##BC011119|SPIRE2|84501|spire homolog 2 (Drosophila)##AK024232|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)##NM_002386|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)##AK225902|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)##AK054666|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)##BC007856|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)##AK292219|TUBB3|10381|tubulin, beta 3 class III##NM_001197181|TUBB3|10381|tubulin, beta 3 class III	0.987095	CTCF.p2:-6:0.987
chrX	80429987	80430118	reg1016022.p1	8.924	+	BC111490 AY497046 AY497048 AY497049 AY497050 AY497051 AY497052 AY497053 AY497054 AY497055 NM_153252	-364845	-	BX537938 NM_152630 BC030784 AK313875 BC028710 BC034979	-754090	+	AK128147 NM_001170574	-839050	+	NM_003022 AK024892 AK309350 BC103762 TSC_hg19_v1_chrX_+_80457495	27351	+	AK094058 AX748432 NM_030763	27388	-	TSC_hg19_v1_chrX_+_80457572 AK309351	27524	+	BC111490|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497046|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497048|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497049|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497050|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497051|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497052|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497053|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497054|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497055|BRWD3|254065|bromodomain and WD repeat domain containing 3##NM_153252|BRWD3|254065|bromodomain and WD repeat domain containing 3##BX537938|FAM46D|169966|family with sequence similarity 46, member D##NM_152630|FAM46D|169966|family with sequence similarity 46, member D##BC030784|FAM46D|169966|family with sequence similarity 46, member D##AK313875|FAM46D|169966|family with sequence similarity 46, member D##BC028710|FAM46D|169966|family with sequence similarity 46, member D##BC034979|FAM46D|169966|family with sequence similarity 46, member D##AK128147|FAM46D|169966|family with sequence similarity 46, member D##NM_001170574|FAM46D|169966|family with sequence similarity 46, member D##NM_003022|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK024892|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309350|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##BC103762|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	0.056845	
chr17	782961	783099	reg1017389.p1	8.923	+	BC009327 AK302073 NM_001205319	-15712	-	BC011550 TSC_hg19_v1_chr17_+_685611 BC050614 AK225128 AB590841 CU679954 CU690740	-97416	+	AF177344 NM_018146 TSC_hg19_v1_chr17_+_685592 AK001443 AK222900	-97472	+	TSC_hg19_v1_chr17_-_882986 AB590045 NM_022463	99970	-	TSC_hg19_v1_chr17_+_900368 BC002324 NM_013337 AK000830 AK225453 AF155330	117325	+	TSC_hg19_v1_chr17_-_982210 AK299909	199195	-	BC009327|NXN|64359|nucleoredoxin##AK302073|NXN|64359|nucleoredoxin##NM_001205319|NXN|64359|nucleoredoxin##BC011550|RNMTL1|55178|RNA methyltransferase like 1##BC050614|RNMTL1|55178|RNA methyltransferase like 1##AK225128|RNMTL1|55178|RNA methyltransferase like 1##AF177344|RNMTL1|55178|RNA methyltransferase like 1##NM_018146|RNMTL1|55178|RNA methyltransferase like 1##AK001443|RNMTL1|55178|RNA methyltransferase like 1##AK222900|RNMTL1|55178|RNA methyltransferase like 1##NM_022463|NXN|64359|nucleoredoxin##BC002324|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##NM_013337|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK000830|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK225453|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AF155330|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK299909|ABR|29|active BCR-related gene	0.988532	CTCF.p2:0:0.989
chr19	14667581	14667699	reg1014667.p2	8.923	+	TSC_hg19_v1_chr19_+_14640435 AK001416 AK315412 BC007801 BC013881 BC005952 AF038958 BC002425 BC034484 AF222742 AX771269 AF038959 AB529027 DQ891949 DQ895135 EU832830 GQ129437	-27181	+	AK094087 TSC_hg19_v1_chr19_+_14640406	-27234	+	BC005384 TSC_hg19_v1_chr19_+_14640405 AK299134	-27236	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	15209	-	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	26274	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	118037	-	AK001416|TECR|9524|trans-2,3-enoyl-CoA reductase##AK315412|TECR|9524|trans-2,3-enoyl-CoA reductase##BC007801|TECR|9524|trans-2,3-enoyl-CoA reductase##BC013881|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005952|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038958|TECR|9524|trans-2,3-enoyl-CoA reductase##BC002425|TECR|9524|trans-2,3-enoyl-CoA reductase##BC034484|TECR|9524|trans-2,3-enoyl-CoA reductase##AF222742|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038959|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ891949|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ895135|TECR|9524|trans-2,3-enoyl-CoA reductase##EU832830|TECR|9524|trans-2,3-enoyl-CoA reductase##GQ129437|TECR|9524|trans-2,3-enoyl-CoA reductase##AK094087|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005384|TECR|9524|trans-2,3-enoyl-CoA reductase##AK299134|TECR|9524|trans-2,3-enoyl-CoA reductase##CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3	1.044311	CTCF.p2:0:1.000
chr1	24354684	24354808	reg1015496.p2	8.922	+	TSC_hg19_v1_chr1_-_24306850 AK222994 AK296175 BC001107 NM_001191005 NM_001191006 NM_001191007 NM_001191009 NM_006625 NM_054016	-47854	-	TSC_hg19_v1_chr1_-_24306818 AF449427 CU674556 AB528881 AY150180 AY150181 AF047448 AF067730 AY007101 BC010074 BC005039 AK001286 AK001656 BC071575 AF419331	-47963	-	TSC_hg19_v1_chr1_+_24286317 AF151042 AK300522 BC068475 AK311305 BC001959 BC085018 BC078177 AF374386	-68400	+	TSC_hg19_v1_chr1_-_24434930 AK125972 BX537911	80223	-	BX647453 BX647644 BX647455 NM_152372 BC067101	83903	-	AB590595 CU688622 AF286095 TSC_hg19_v1_chr1_-_24469610 AK226001 BC029273 BC014096 AK308522 AK292204 AK313971 NM_021258	114926	-	AK222994|SRSF10|10772|serine/arginine-rich splicing factor 10##AK296175|SRSF10|10772|serine/arginine-rich splicing factor 10##BC001107|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_001191005|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_001191006|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_001191007|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_001191009|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_006625|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_054016|SRSF10|10772|serine/arginine-rich splicing factor 10##AF449427|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150180|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150181|SRSF10|10772|serine/arginine-rich splicing factor 10##AF047448|SRSF10|10772|serine/arginine-rich splicing factor 10##AF067730|SRSF10|10772|serine/arginine-rich splicing factor 10##AY007101|SRSF10|10772|serine/arginine-rich splicing factor 10##BC010074|SRSF10|10772|serine/arginine-rich splicing factor 10##BC005039|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001286|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001656|SRSF10|10772|serine/arginine-rich splicing factor 10##BC071575|SRSF10|10772|serine/arginine-rich splicing factor 10##AF419331|SRSF10|10772|serine/arginine-rich splicing factor 10##AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AK125972|MYOM3|127294|myomesin family, member 3##BX537911|MYOM3|127294|myomesin family, member 3##BX647453|MYOM3|127294|myomesin family, member 3##BX647644|MYOM3|127294|myomesin family, member 3##BX647455|MYOM3|127294|myomesin family, member 3##NM_152372|MYOM3|127294|myomesin family, member 3##BC067101|MYOM3|127294|myomesin family, member 3##AF286095|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK226001|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC029273|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC014096|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK308522|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK292204|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK313971|IL22RA1|58985|interleukin 22 receptor, alpha 1##NM_021258|IL22RA1|58985|interleukin 22 receptor, alpha 1	0.723819	CTCF.p2:18:0.724
chr12	53718609	53718737	reg1014522.p2	8.921	+	TSC_hg19_v1_chr12_-_53715374 AK293342 BC000659 BC018836 AY237818 NM_001173466 NM_015665	-3296	-	BT006912 DQ893306 DQ893864 TSC_hg19_v1_chr12_-_53715341 AF226048 AJ289857 AK000833 AK222509	-3379	-	TSC_hg19_v1_chr12_-_53715042 AK094302	-3611	-	AB527932 EU446563 BC101549 BC113613 AY150673 AF477981 NM_152860 AF466179	10810	-	AY150674 NM_001173467	11330	-	TSC_hg19_v1_chr12_+_53773935 BC062539 NM_001251825 NM_138473 AF255682 AJ272134	55317	+	AK293342|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BC000659|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BC018836|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AY237818|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##NM_001173466|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##NM_015665|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BT006912|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##DQ893306|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##DQ893864|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AF226048|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AJ289857|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AK000833|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AK222509|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AK094302|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##EU446563|SP7|121340|Sp7 transcription factor##BC101549|SP7|121340|Sp7 transcription factor##BC113613|SP7|121340|Sp7 transcription factor##AY150673|SP7|121340|Sp7 transcription factor##AF477981|SP7|121340|Sp7 transcription factor##NM_152860|SP7|121340|Sp7 transcription factor##AF466179|SP7|121340|Sp7 transcription factor##AY150674|SP7|121340|Sp7 transcription factor##NM_001173467|SP7|121340|Sp7 transcription factor##BC062539|SP1|6667|Sp1 transcription factor##NM_001251825|SP1|6667|Sp1 transcription factor##NM_138473|SP1|6667|Sp1 transcription factor##AF255682|SP1|6667|Sp1 transcription factor##AJ272134|SP1|6667|Sp1 transcription factor	0.659359	CTCF.p2:-12:0.659
chr20	62210016	62210111	reg1013307.p1	8.921	+	TSC_hg19_v1_chr20_-_62205593 AB232667 BC035130 AK023724 NM_001037335	-4475	-	AB051556 BC150283 NM_033405	-10957	-	BC000912 NM_024059	-25691	+	AB033095 TSC_hg19_v1_chr20_-_62258409 BC036305 NM_012384	48312	-	TSC_hg19_v1_chr20_-_62258426 AK298927	48374	-	DQ893121 DQ896397 BC047671 BC021084 BC032527 AF069709 BC056873 TSC_hg19_v1_chr20_-_62284781 AK074860 NM_015894 AK310010 BC009381 BC025234	74697	-	AB232667|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC035130|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##AK023724|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##NM_001037335|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##AB051556|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC150283|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##NM_033405|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC000912|C20orf195|79025|chromosome 20 open reading frame 195##NM_024059|C20orf195|79025|chromosome 20 open reading frame 195##AB033095|GMEB2|26205|glucocorticoid modulatory element binding protein 2##BC036305|GMEB2|26205|glucocorticoid modulatory element binding protein 2##NM_012384|GMEB2|26205|glucocorticoid modulatory element binding protein 2##AK298927|GMEB2|26205|glucocorticoid modulatory element binding protein 2##DQ893121|STMN3|50861|stathmin-like 3##DQ896397|STMN3|50861|stathmin-like 3##BC047671|STMN3|50861|stathmin-like 3##BC032527|STMN3|50861|stathmin-like 3##AF069709|STMN3|50861|stathmin-like 3##BC056873|STMN3|50861|stathmin-like 3##AK074860|STMN3|50861|stathmin-like 3##NM_015894|STMN3|50861|stathmin-like 3##AK310010|STMN3|50861|stathmin-like 3##BC009381|STMN3|50861|stathmin-like 3##BC025234|STMN3|50861|stathmin-like 3	0.938615	CTCF.p2:17:0.939
chr4	95312102	95312223	reg1015168.p1	8.920	+	TSC_hg19_v1_chr4_-_95263988 BC020734 AK290075 NM_014485	-48156	-	TSC_hg19_v1_chr4_+_95129015 NM_001128429 NM_020159 BC045534 AY008271 BC041800	-183048	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	-183351	+	TSC_hg19_v1_chr4_+_95373030 AY345240 NM_001011513 NM_001011515 NM_001011516 NM_006457	60860	+	TSC_hg19_v1_chr4_+_95373092 BC017902 BC008741 AK291898 AK291624 AK304125 AK296980 AL832157 AL832686 AF061258 AL833151 AL833438	60934	+	BC026029 AM393306 AM393394 AM393485 AM393621 AM393813 DQ890686 DQ893868 AB587372 CU676108 CU679071 AY598328 BT007328 TSC_hg19_v1_chr4_+_95376500	64288	+	BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase##AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase##NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase##NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY345240|PDLIM5|10611|PDZ and LIM domain 5##NM_001011513|PDLIM5|10611|PDZ and LIM domain 5##NM_001011515|PDLIM5|10611|PDZ and LIM domain 5##NM_001011516|PDLIM5|10611|PDZ and LIM domain 5##NM_006457|PDLIM5|10611|PDZ and LIM domain 5##BC017902|PDLIM5|10611|PDZ and LIM domain 5##BC008741|PDLIM5|10611|PDZ and LIM domain 5##AK291898|PDLIM5|10611|PDZ and LIM domain 5##AK291624|PDLIM5|10611|PDZ and LIM domain 5##AK304125|PDLIM5|10611|PDZ and LIM domain 5##AK296980|PDLIM5|10611|PDZ and LIM domain 5##AL832157|PDLIM5|10611|PDZ and LIM domain 5##AL832686|PDLIM5|10611|PDZ and LIM domain 5##AF061258|PDLIM5|10611|PDZ and LIM domain 5##AL833151|PDLIM5|10611|PDZ and LIM domain 5##AL833438|PDLIM5|10611|PDZ and LIM domain 5##BC026029|PDLIM5|10611|PDZ and LIM domain 5##AM393306|PDLIM5|10611|PDZ and LIM domain 5##AM393394|PDLIM5|10611|PDZ and LIM domain 5##AM393485|PDLIM5|10611|PDZ and LIM domain 5##AM393621|PDLIM5|10611|PDZ and LIM domain 5##AM393813|PDLIM5|10611|PDZ and LIM domain 5##DQ890686|PDLIM5|10611|PDZ and LIM domain 5##DQ893868|PDLIM5|10611|PDZ and LIM domain 5##AY598328|PDLIM5|10611|PDZ and LIM domain 5##BT007328|PDLIM5|10611|PDZ and LIM domain 5	0.986111	CTCF.p2:-7:0.986
chr14	76669756	76669936	reg1013996.p1	8.919	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-51540	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-51569	+	TSC_hg19_v1_chr14_+_76618258 NM_017926 NM_017972 BC058032	-51590	+	NM_004452	167843	+	TSC_hg19_v1_chr14_+_77227817 AK094330	557954	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	558609	+	AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_017926|C14orf118|55668|chromosome 14 open reading frame 118##NM_017972|C14orf118|55668|chromosome 14 open reading frame 118##BC058032|C14orf118|55668|chromosome 14 open reading frame 118##NM_004452|ESRRB|2103|estrogen-related receptor beta##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1	0.0	
chr2	128236926	128237040	reg1015255.p1	8.919	+	TSC_hg19_v1_chr2_+_128176019 BC034377	-60957	+	TSC_hg19_v1_chr2_+_128176007 NM_000312 AK298449 AK303773 AK298280 AK298454 X02750	-60981	+	AF234262 AF239798 BC136293 AF111105 NM_006609	-136245	-	BC065279 BC110536 BC110537 TSC_hg19_v1_chr2_-_128284054 AK000868 AL834178 AK296848 AK027561 AK295970 AK309006 AK056881 AK294669 NM_017969	46982	-	TSC_hg19_v1_chr2_+_128293312 NM_001080527	56361	+	NM_001161415 NM_001161416 NM_001161417 NM_005291 AK292725 BX538082 BC013202 Z94154 Y12546 BC031653	166615	+	BC034377|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##NM_000312|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298449|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK303773|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298280|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298454|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##X02750|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AF239798|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##BC136293|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##AF111105|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##NM_006609|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##BC065279|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110536|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110537|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK000868|IWS1|55677|IWS1 homolog (S. cerevisiae)##AL834178|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK296848|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK027561|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK295970|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK309006|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK056881|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK294669|IWS1|55677|IWS1 homolog (S. cerevisiae)##NM_017969|IWS1|55677|IWS1 homolog (S. cerevisiae)##NM_001080527|MYO7B|4648|myosin VIIB##NM_001161415|GPR17|2840|G protein-coupled receptor 17##NM_001161416|GPR17|2840|G protein-coupled receptor 17##NM_001161417|GPR17|2840|G protein-coupled receptor 17##NM_005291|GPR17|2840|G protein-coupled receptor 17##AK292725|GPR17|2840|G protein-coupled receptor 17##BX538082|GPR17|2840|G protein-coupled receptor 17##BC013202|GPR17|2840|G protein-coupled receptor 17##Z94154|GPR17|2840|G protein-coupled receptor 17##Y12546|GPR17|2840|G protein-coupled receptor 17##BC031653|GPR17|2840|G protein-coupled receptor 17	0.956728	CTCF.p2:8:0.957
chr6	15327605	15327739	reg1015643.p1	8.919	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-78559	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-78771	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-81260	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	335505	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	335618	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	801630	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.446882	CTCF.p2:4:0.447
chr1	151416437	151416576	reg1014239.p1	8.918	+	TSC_hg19_v1_chr1_-_151414644 AB007930 AB463182 NM_207171 CU691222	-1845	-	TSC_hg19_v1_chr1_+_151372038 AK313825 AK294149 D26600 NM_002796 BC008314 BC010088 BC010098 BC011768 BC012168 BC017451 BC017486 BC000331 AB464086 BT006917 CR456820 CU675936 CU678915 CU679615 CU680252 DQ890748 DQ892020 DQ895212 S71381	-44466	+	AK310044 BC009084 NM_003944 TSC_hg19_v1_chr1_-_151345182 AK303815 AK296661 AK309264 AK315643 AK023875 AK298355 BC032997	-71337	-	TSC_hg19_v1_chr1_-_151431656 BX649163 AB037911 AB075477 AK000199 AK300307 BC057773 BX537561 AK299791 AK302501	15170	-	TSC_hg19_v1_chr1_-_151431954 AJ242979 BX537838 NM_001194937 NM_001194938 NM_015100 NM_145796	15425	-	NM_020770 AF263462 TSC_hg19_v1_chr1_+_151483892 AB037740 AK290007 BC152445 BC146657	67390	+	AB007930|POGZ|23126|pogo transposable element with ZNF domain##NM_207171|POGZ|23126|pogo transposable element with ZNF domain##AK313825|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##AK294149|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##D26600|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##NM_002796|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC008314|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC010088|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC010098|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC011768|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC012168|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC017451|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC017486|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC000331|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BT006917|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##CR456820|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##DQ890748|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##DQ892020|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##DQ895212|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##S71381|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##AK310044|SELENBP1|8991|selenium binding protein 1##BC009084|SELENBP1|8991|selenium binding protein 1##NM_003944|SELENBP1|8991|selenium binding protein 1##AK303815|SELENBP1|8991|selenium binding protein 1##AK296661|SELENBP1|8991|selenium binding protein 1##AK309264|SELENBP1|8991|selenium binding protein 1##AK315643|SELENBP1|8991|selenium binding protein 1##AK023875|SELENBP1|8991|selenium binding protein 1##AK298355|SELENBP1|8991|selenium binding protein 1##BC032997|SELENBP1|8991|selenium binding protein 1##BX649163|POGZ|23126|pogo transposable element with ZNF domain##AB037911|POGZ|23126|pogo transposable element with ZNF domain##AB075477|POGZ|23126|pogo transposable element with ZNF domain##AK000199|POGZ|23126|pogo transposable element with ZNF domain##AK300307|POGZ|23126|pogo transposable element with ZNF domain##BC057773|POGZ|23126|pogo transposable element with ZNF domain##BX537561|POGZ|23126|pogo transposable element with ZNF domain##AK299791|POGZ|23126|pogo transposable element with ZNF domain##AK302501|POGZ|23126|pogo transposable element with ZNF domain##AJ242979|POGZ|23126|pogo transposable element with ZNF domain##BX537838|POGZ|23126|pogo transposable element with ZNF domain##NM_001194937|POGZ|23126|pogo transposable element with ZNF domain##NM_001194938|POGZ|23126|pogo transposable element with ZNF domain##NM_015100|POGZ|23126|pogo transposable element with ZNF domain##NM_145796|POGZ|23126|pogo transposable element with ZNF domain##NM_020770|CGN|57530|cingulin##AF263462|CGN|57530|cingulin##AB037740|CGN|57530|cingulin##AK290007|CGN|57530|cingulin##BC152445|CGN|57530|cingulin##BC146657|CGN|57530|cingulin	0.20404	CTCF.p2:4:0.204
chr17	4529376	4529469	reg1010997.p1	8.918	+	BC110859 NM_001114974	-41589	+	NM_198501 AK124452 BC105050 BC112177	-42098	+	CU687648 BC063111 AK129501 AK300648 AK296645 TSC_hg19_v1_chr17_-_4463871 AK074646 NM_001122890 NM_153338	-65571	-	AB590843 M23892 BC029032 NM_001140 AK290309 AK296792 AK296904 AK312557	15536	-	AY882602 U88154 BC039131 TSC_hg19_v1_chr17_-_4607413 AB384790 AF547989 BC069058 U88153 AK226056	77883	-	TSC_hg19_v1_chr17_-_4607415 AK293838	77995	-	BC110859|SMTNL2|342527|smoothelin-like 2##NM_001114974|SMTNL2|342527|smoothelin-like 2##NM_198501|SMTNL2|342527|smoothelin-like 2##AK124452|SMTNL2|342527|smoothelin-like 2##BC105050|SMTNL2|342527|smoothelin-like 2##BC112177|SMTNL2|342527|smoothelin-like 2##BC063111|GGT6|124975|gamma-glutamyltransferase 6##AK129501|GGT6|124975|gamma-glutamyltransferase 6##AK300648|GGT6|124975|gamma-glutamyltransferase 6##AK296645|GGT6|124975|gamma-glutamyltransferase 6##AK074646|GGT6|124975|gamma-glutamyltransferase 6##NM_001122890|GGT6|124975|gamma-glutamyltransferase 6##NM_153338|GGT6|124975|gamma-glutamyltransferase 6##M23892|ALOX15|246|arachidonate 15-lipoxygenase##BC029032|ALOX15|246|arachidonate 15-lipoxygenase##NM_001140|ALOX15|246|arachidonate 15-lipoxygenase##AK290309|ALOX15|246|arachidonate 15-lipoxygenase##AK296792|ALOX15|246|arachidonate 15-lipoxygenase##AK296904|ALOX15|246|arachidonate 15-lipoxygenase##AK312557|ALOX15|246|arachidonate 15-lipoxygenase##AY882602|PELP1|27043|proline, glutamate and leucine rich protein 1##U88154|PELP1|27043|proline, glutamate and leucine rich protein 1##BC039131|PELP1|27043|proline, glutamate and leucine rich protein 1##AF547989|PELP1|27043|proline, glutamate and leucine rich protein 1##BC069058|PELP1|27043|proline, glutamate and leucine rich protein 1##U88153|PELP1|27043|proline, glutamate and leucine rich protein 1##AK226056|PELP1|27043|proline, glutamate and leucine rich protein 1##AK293838|PELP1|27043|proline, glutamate and leucine rich protein 1	0.982337	CTCF.p2:18:0.982
chr2	158866918	158867049	reg1013533.p1	8.918	+	BC033529 NM_001135098	-15293	+	AK297765 AK313630 NM_001111067	-134626	-	BC033867 BC036748 NM_001105	-135361	-	AK122743 NM_173355	91398	+	CU677295 BC105928 BC107596 BC107597 AK123220 AK058105 AF458588 BC015395 AK309246 TSC_hg19_v1_chr2_-_159313250 AK308783 AK311042 NM_001171637 NM_138803	446126	-	TSC_hg19_v1_chr2_+_159313419 BC034473	446452	+	BC033529|UPP2|151531|uridine phosphorylase 2##NM_001135098|UPP2|151531|uridine phosphorylase 2##AK297765|ACVR1|90|activin A receptor, type I##AK313630|ACVR1|90|activin A receptor, type I##NM_001111067|ACVR1|90|activin A receptor, type I##BC033867|ACVR1|90|activin A receptor, type I##BC036748|ACVR1|90|activin A receptor, type I##NM_001105|ACVR1|90|activin A receptor, type I##AK122743|UPP2|151531|uridine phosphorylase 2##NM_173355|UPP2|151531|uridine phosphorylase 2##BC105928|CCDC148|130940|coiled-coil domain containing 148##BC107596|CCDC148|130940|coiled-coil domain containing 148##BC107597|CCDC148|130940|coiled-coil domain containing 148##AK123220|CCDC148|130940|coiled-coil domain containing 148##AK058105|CCDC148|130940|coiled-coil domain containing 148##AF458588|CCDC148|130940|coiled-coil domain containing 148##BC015395|CCDC148|130940|coiled-coil domain containing 148##AK309246|CCDC148|130940|coiled-coil domain containing 148##AK308783|CCDC148|130940|coiled-coil domain containing 148##AK311042|CCDC148|130940|coiled-coil domain containing 148##NM_001171637|CCDC148|130940|coiled-coil domain containing 148##NM_138803|CCDC148|130940|coiled-coil domain containing 148##BC034473|PKP4|8502|plakophilin 4	0.625991	CTCF.p2:-1:0.626
chr16	1107601	1107697	reg1018110.p2	8.917	+	TSC_hg19_v1_chr16_+_1032063 AK024491	-75575	+	BC031797 NM_014587 TSC_hg19_v1_chr16_+_1031808 AB464249 AF226675	-75785	+	AK022743 AK225065 AK294329 TSC_hg19_v1_chr16_-_1020985 NM_022773	-86626	-	NM_001172560	15106	+	AK308381 NM_001053 AB528240 DQ448303 DQ448304	21175	+	AY358832 NM_207419	38594	-	AK024491|SOX8|30812|SRY (sex determining region Y)-box 8##BC031797|SOX8|30812|SRY (sex determining region Y)-box 8##NM_014587|SOX8|30812|SRY (sex determining region Y)-box 8##AF226675|SOX8|30812|SRY (sex determining region Y)-box 8##AK022743|LMF1|64788|lipase maturation factor 1##AK225065|LMF1|64788|lipase maturation factor 1##AK294329|LMF1|64788|lipase maturation factor 1##NM_022773|LMF1|64788|lipase maturation factor 1##NM_001172560|SSTR5|6755|somatostatin receptor 5##AK308381|SSTR5|6755|somatostatin receptor 5##NM_001053|SSTR5|6755|somatostatin receptor 5##DQ448303|SSTR5|6755|somatostatin receptor 5##DQ448304|SSTR5|6755|somatostatin receptor 5##AY358832|C1QTNF8|390664|C1q and tumor necrosis factor related protein 8##NM_207419|C1QTNF8|390664|C1q and tumor necrosis factor related protein 8	0.999741	CTCF.p2:3:1.000
chr2	136555178	136555305	reg1015921.p1	8.917	+	TSC_hg19_v1_chr2_+_136499557 AK026971	-55684	+	TSC_hg19_v1_chr2_+_136499492 AK292829 AB527369 AM392761 AM393478 CU690126 DQ891123 DQ894302	-55748	+	TSC_hg19_v1_chr2_+_136499437 BC035594 EF199840 BX647662 AK304096 D87684 BC020806	-55844	+	NM_002299 X07994	39508	-	CU689360 BC020268 BC032374 TSC_hg19_v1_chr2_-_136633997 U46838 AK312575 BC008774 D84557	78724	-	AK299236 TSC_hg19_v1_chr2_-_136634035 NM_005915 AK303455	78790	-	AK026971|UBXN4|23190|UBX domain protein 4##AK292829|UBXN4|23190|UBX domain protein 4##AM392761|UBXN4|23190|UBX domain protein 4##AM393478|UBXN4|23190|UBX domain protein 4##DQ891123|UBXN4|23190|UBX domain protein 4##DQ894302|UBXN4|23190|UBX domain protein 4##BC035594|UBXN4|23190|UBX domain protein 4##EF199840|UBXN4|23190|UBX domain protein 4##BX647662|UBXN4|23190|UBX domain protein 4##AK304096|UBXN4|23190|UBX domain protein 4##D87684|UBXN4|23190|UBX domain protein 4##BC020806|UBXN4|23190|UBX domain protein 4##NM_002299|LCT|3938|lactase##X07994|LCT|3938|lactase##BC020268|MCM6|4175|minichromosome maintenance complex component 6##BC032374|MCM6|4175|minichromosome maintenance complex component 6##U46838|MCM6|4175|minichromosome maintenance complex component 6##AK312575|MCM6|4175|minichromosome maintenance complex component 6##BC008774|MCM6|4175|minichromosome maintenance complex component 6##D84557|MCM6|4175|minichromosome maintenance complex component 6##AK299236|MCM6|4175|minichromosome maintenance complex component 6##NM_005915|MCM6|4175|minichromosome maintenance complex component 6##AK303455|MCM6|4175|minichromosome maintenance complex component 6	0.999209	CTCF.p2:-1:0.999
chr2	151344270	151344389	reg1012087.p1	8.917	+	X97758 BC012513 TSC_hg19_v1_chr2_-_151344182 AK298007 AK311312 NM_005168 AK313224	-165	-	TSC_hg19_v1_chr2_-_150444290 NM_015702	-900022	-	TSC_hg19_v1_chr2_-_150444250 BC023995 BC010894 AK310001 AF161510 BC022859 BC000932	-900072	-	TSC_hg19_v1_chr2_-_152118378 BC136410 BC136411 AK127552 NM_198557	774004	-	TSC_hg19_v1_chr2_-_152146171 BC001268	801823	-	U32849 AK124323 TSC_hg19_v1_chr2_-_152146429 AK291548 AK298754 NM_004688	802074	-	X97758|RND3|390|Rho family GTPase 3##BC012513|RND3|390|Rho family GTPase 3##AK298007|RND3|390|Rho family GTPase 3##NM_005168|RND3|390|Rho family GTPase 3##AK313224|RND3|390|Rho family GTPase 3##NM_015702|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC023995|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC010894|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK310001|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF161510|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC022859|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC000932|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC136410|RBM43|375287|RNA binding motif protein 43##BC136411|RBM43|375287|RNA binding motif protein 43##AK127552|RBM43|375287|RNA binding motif protein 43##NM_198557|RBM43|375287|RNA binding motif protein 43##BC001268|NMI|9111|N-myc (and STAT) interactor##U32849|NMI|9111|N-myc (and STAT) interactor##AK124323|NMI|9111|N-myc (and STAT) interactor##AK291548|NMI|9111|N-myc (and STAT) interactor##AK298754|NMI|9111|N-myc (and STAT) interactor##NM_004688|NMI|9111|N-myc (and STAT) interactor	0.0	
chr12	69265857	69265971	reg1014564.p2	8.916	+	EU076746 EU076747 EU076748 EU076749 TSC_hg19_v1_chr12_+_69202803	-63113	+	TSC_hg19_v1_chr12_+_69201980 AK290341	-63922	+	TSC_hg19_v1_chr12_+_69201958 BC009893 BC013887 BC067077 M92424 NM_002392 Z12020	-64003	+	TSC_hg19_v1_chr12_-_69326952 AF368463 AK313180 BC022276 NM_001005502 NM_198320	61048	-	J04970 NM_001874 AK127859	91105	-	NM_007007 TSC_hg19_v1_chr12_+_69633348 AK223568 AK299928	367419	+	EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##AK290341|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##M92424|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##NM_002392|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##Z12020|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##AF368463|CPM|1368|carboxypeptidase M##AK313180|CPM|1368|carboxypeptidase M##BC022276|CPM|1368|carboxypeptidase M##NM_001005502|CPM|1368|carboxypeptidase M##NM_198320|CPM|1368|carboxypeptidase M##J04970|CPM|1368|carboxypeptidase M##NM_001874|CPM|1368|carboxypeptidase M##AK127859|CPM|1368|carboxypeptidase M##NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	0.875422	CTCF.p2:-5:0.875
chr4	111437654	111437759	reg1014128.p1	8.916	+	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	-40333	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	-317921	-	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-603659	+	AK313987 TSC_hg19_v1_chr4_-_111543909	106204	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	106569	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	120463	-	AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK313987|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2	0.926773	CTCF.p2:8:0.927
chr4	65405068	65405194	reg1014368.p1	8.916	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	-130035	-	NM_015236	-3042293	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-3338156	+	AK307826 NM_004439 NM_182472	1130521	-	TSC_hg19_v1_chr4_-_66536182 AB209375	1131066	-	CU688992 TSC_hg19_v1_chr4_-_68411171	3005992	-	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.994818	CTCF.p2:35:0.995
chr14	39837675	39837806	reg1014720.p2	8.915	+	TSC_hg19_v1_chr14_+_39736592 BC039017 AK315254 BC029513 BC051363 U73682	-101167	+	TSC_hg19_v1_chr14_+_39736287 NM_001247989 NM_001247990 NM_005930 NM_203355 U94780 BC064355 AF338234	-101373	+	TSC_hg19_v1_chr14_+_39735882 AK055791	-101861	+	TSC_hg19_v1_chr14_-_39901371 BX248772	63617	-	BC053537 BC068566 BC030611 NM_203301	63921	-	NM_152447 AK096627	2239027	+	BC039017|CTAGE5|4253|CTAGE family, member 5##AK315254|CTAGE5|4253|CTAGE family, member 5##BC029513|CTAGE5|4253|CTAGE family, member 5##BC051363|CTAGE5|4253|CTAGE family, member 5##U73682|CTAGE5|4253|CTAGE family, member 5##NM_001247989|CTAGE5|4253|CTAGE family, member 5##NM_001247990|CTAGE5|4253|CTAGE family, member 5##NM_005930|CTAGE5|4253|CTAGE family, member 5##NM_203355|CTAGE5|4253|CTAGE family, member 5##U94780|CTAGE5|4253|CTAGE family, member 5##BC064355|CTAGE5|4253|CTAGE family, member 5##AF338234|CTAGE5|4253|CTAGE family, member 5##AK055791|CTAGE5|4253|CTAGE family, member 5##BX248772|FBXO33|254170|F-box protein 33##BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5	0.968509	CTCF.p2:16:0.969
chr17	15429949	15430070	reg1013423.p1	8.915	+	BC029542 NM_001204477	-59085	-	AF334676 AK223534 BC031688 AK314327 AK057390 NM_031898	-185082	-	BC091499 D11428 NM_000304 TSC_hg19_v1_chr17_-_15168644	-261391	-	TSC_hg19_v1_chr17_-_15466802 BC011952 AK303475 AB074181 AK310363 NM_001135036 NM_001204478 NM_145301	36849	-	AK057407 NM_006382	93008	-	BC001564 CR457136 EU446937 HQ257965 AK002035 AK314557 TSC_hg19_v1_chr17_-_15554961 AB209899	124878	-	BC029542|CDRT4|284040|CMT1A duplicated region transcript 4##NM_001204477|CDRT4|284040|CMT1A duplicated region transcript 4##AF334676|TEKT3|64518|tektin 3##AK223534|TEKT3|64518|tektin 3##BC031688|TEKT3|64518|tektin 3##AK314327|TEKT3|64518|tektin 3##AK057390|TEKT3|64518|tektin 3##NM_031898|TEKT3|64518|tektin 3##BC091499|PMP22|5376|peripheral myelin protein 22##D11428|PMP22|5376|peripheral myelin protein 22##NM_000304|PMP22|5376|peripheral myelin protein 22##BC011952|FAM18B2|201158|family with sequence similarity 18, member B2##AK303475|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 readthrough##AB074181|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 readthrough##AK310363|FAM18B2|201158|family with sequence similarity 18, member B2##NM_001135036|FAM18B2|201158|family with sequence similarity 18, member B2##NM_001204478|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 readthrough##NM_145301|FAM18B2|201158|family with sequence similarity 18, member B2##AK057407|CDRT1|374286|CMT1A duplicated region transcript 1##NM_006382|CDRT1|374286|CMT1A duplicated region transcript 1##BC001564|TRIM16|10626|tripartite motif containing 16##CR457136|TRIM16|10626|tripartite motif containing 16##EU446937|TRIM16|10626|tripartite motif containing 16##HQ257965|TRIM16|10626|tripartite motif containing 16##AK002035|TRIM16|10626|tripartite motif containing 16##AK314557|TRIM16|10626|tripartite motif containing 16	0.92735	CTCF.p2:21:0.927
chr19	52751727	52751853	reg1014510.p2	8.915	+	TSC_hg19_v1_chr19_+_52693337 AB384756 CR450340 DQ892756 DQ896000	-58449	+	TSC_hg19_v1_chr19_+_52693329 AK293493	-58461	+	TSC_hg19_v1_chr19_+_52693304 AK290593 AK291932 AK091387 AK130000 AK293174 AX746952 BC026733 AK299012 AK303934 AK307743 BC001537	-58504	+	BX648899 NM_001010851 TSC_hg19_v1_chr19_+_52772839 BC136833 BC136834 AK024074	21044	+	TSC_hg19_v1_chr19_+_52772847 BX538183 EU832461 EU832543	21066	+	BC007056 BC054018 NM_144684 AK096559 AK096442 AK303271 AX721138 AL832560 BC065503 AY512662 BC018783	48647	+	CR450340|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##DQ892756|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##DQ896000|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK293493|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK290593|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK291932|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK091387|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK130000|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK293174|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##BC026733|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK299012|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK303934|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##AK307743|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##BC001537|PPP2R1A|5518|protein phosphatase 2, regulatory subunit A, alpha##BX648899|ZNF766|90321|zinc finger protein 766##NM_001010851|ZNF766|90321|zinc finger protein 766##BC136833|ZNF766|90321|zinc finger protein 766##BC136834|ZNF766|90321|zinc finger protein 766##AK024074|ZNF766|90321|zinc finger protein 766##BX538183|ZNF766|90321|zinc finger protein 766##EU832461|ZNF766|90321|zinc finger protein 766##EU832543|ZNF766|90321|zinc finger protein 766##BC007056|ZNF480|147657|zinc finger protein 480##BC054018|ZNF480|147657|zinc finger protein 480##NM_144684|ZNF480|147657|zinc finger protein 480##AK096559|ZNF480|147657|zinc finger protein 480##AK096442|ZNF480|147657|zinc finger protein 480##AK303271|ZNF480|147657|zinc finger protein 480##AL832560|ZNF480|147657|zinc finger protein 480##BC065503|ZNF480|147657|zinc finger protein 480##AY512662|ZNF480|147657|zinc finger protein 480##BC018783|ZNF480|147657|zinc finger protein 480	0.781076	CTCF.p2:0:0.781
chr6	52151763	52151871	reg1007731.p1	8.914	+	TSC_hg19_v1_chr6_-_52149551 D38073 AK299566 NM_002388 AK301704	-2238	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	-2297	-	AB528319 DQ893654 DQ895840 TSC_hg19_v1_chr6_-_52149506 AK312928 AK300754 X62153 AY032603	-2326	-	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	75140	+	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	133261	+	AK297632 NM_001172420	133987	+	D38073|MCM3|4172|minichromosome maintenance complex component 3##AK299566|MCM3|4172|minichromosome maintenance complex component 3##NM_002388|MCM3|4172|minichromosome maintenance complex component 3##AK301704|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3##DQ893654|MCM3|4172|minichromosome maintenance complex component 3##DQ895840|MCM3|4172|minichromosome maintenance complex component 3##AK312928|MCM3|4172|minichromosome maintenance complex component 3##AK300754|MCM3|4172|minichromosome maintenance complex component 3##X62153|MCM3|4172|minichromosome maintenance complex component 3##AY032603|MCM3|4172|minichromosome maintenance complex component 3##NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1	0.062962	
chr6	90824	90941	reg1016720.p1	8.914	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	201203	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	201615	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	300882	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.283133	CTCF.p2:15:0.283
chr2	42316591	42316712	reg1013306.p1	8.913	+	AB528999 TSC_hg19_v1_chr2_+_42275979	-40690	+	TSC_hg19_v1_chr2_+_42275160 NM_138370	-41519	+	AK124893 NM_001242815	-135709	-	TSC_hg19_v1_chr2_+_42396514 AB275889 NM_001145076 NM_019063 AK314702 BC146799 AF177377 BC067777 BC104647 BC140845 AB374363 AB462412 AB384933	79924	+	AF127788 BT007371 CR542208 CU675543 DQ890566 DQ893729 TSC_hg19_v1_chr2_-_42588354 AB007618 BC005251 BC007095 NM_004718	271682	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	403907	-	NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_001145076|EML4|27436|echinoderm microtubule associated protein like 4##NM_019063|EML4|27436|echinoderm microtubule associated protein like 4##AK314702|EML4|27436|echinoderm microtubule associated protein like 4##BC146799|EML4|27436|echinoderm microtubule associated protein like 4##AF177377|EML4|27436|echinoderm microtubule associated protein like 4##BC067777|EML4|27436|echinoderm microtubule associated protein like 4##BC104647|EML4|27436|echinoderm microtubule associated protein like 4##BC140845|EML4|27436|echinoderm microtubule associated protein like 4##AF127788|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BT007371|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##CR542208|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ890566|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ893729|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB007618|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC005251|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC007095|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##NM_004718|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3	0.987312	CTCF.p2:5:0.987
chr11	46411062	46411181	reg1014730.p1	8.912	+	BC119775 BC119817 AF385590 AF498918 NM_000741 BC095546 BC137535	-2990	-	NM_001012333 TSC_hg19_v1_chr11_+_46403310	-7815	+	TSC_hg19_v1_chr11_+_46403285 X55110	-7834	+	BC045609 NM_017749 AK302808	201821	-	AL834190 TSC_hg19_v1_chr11_-_46615568 AK057896 AK000301 AB051523	204414	-	AK304530 TSC_hg19_v1_chr11_-_46615589	204482	-	BC119775|CHRM4|1132|cholinergic receptor, muscarinic 4##BC119817|CHRM4|1132|cholinergic receptor, muscarinic 4##AF385590|CHRM4|1132|cholinergic receptor, muscarinic 4##AF498918|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_000741|CHRM4|1132|cholinergic receptor, muscarinic 4##BC095546|CHRM4|1132|cholinergic receptor, muscarinic 4##BC137535|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_001012333|MDK|4192|midkine (neurite growth-promoting factor 2)##X55110|MDK|4192|midkine (neurite growth-promoting factor 2)##BC045609|AMBRA1|55626|autophagy/beclin-1 regulator 1##NM_017749|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK302808|AMBRA1|55626|autophagy/beclin-1 regulator 1##AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1##AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1	0.749035	CTCF.p2:-2:0.721
chr1	170851189	170851296	reg1014245.p2	8.912	+	BC074993 NM_006902 NM_022716 EU446648 AB527492 AB451463 TSC_hg19_v1_chr1_+_170633380 M95929	-217880	+	TSC_hg19_v1_chr1_+_170632302 AK225968	-218952	+	TSC_hg19_v1_chr1_+_170501309 AK308339 NM_001146039 NM_152281 AK021814 BC064945 CU687974 BC047476 AK057661	-349939	+	NM_001163629 NM_025063 AK027203 BC113390 BC113392	53405	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	208799	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	303180	+	BC074993|PRRX1|5396|paired related homeobox 1##NM_006902|PRRX1|5396|paired related homeobox 1##NM_022716|PRRX1|5396|paired related homeobox 1##EU446648|PRRX1|5396|paired related homeobox 1##AB451463|PRRX1|5396|paired related homeobox 1##AK225968|PRRX1|5396|paired related homeobox 1##AK308339|GORAB|92344|golgin, RAB6-interacting##NM_001146039|GORAB|92344|golgin, RAB6-interacting##NM_152281|GORAB|92344|golgin, RAB6-interacting##AK021814|GORAB|92344|golgin, RAB6-interacting##BC064945|GORAB|92344|golgin, RAB6-interacting##BC047476|GORAB|92344|golgin, RAB6-interacting##AK057661|GORAB|92344|golgin, RAB6-interacting##NM_001163629|C1orf129|80133|chromosome 1 open reading frame 129##NM_025063|C1orf129|80133|chromosome 1 open reading frame 129##AK027203|C1orf129|80133|chromosome 1 open reading frame 129##BC113390|C1orf129|80133|chromosome 1 open reading frame 129##BC113392|C1orf129|80133|chromosome 1 open reading frame 129##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	0.342802	CTCF.p2:9:0.316
chr1	185782643	185782788	reg1017342.p1	8.912	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	-79139	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-496245	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-496396	-	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	482692	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	561542	-	BC016514 TSC_hg19_v1_chr1_-_186344361	561630	-	AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)##BC016514|TPR|7175|translocated promoter region (to activated MET oncogene)	0.969405	CTCF.p2:-9:0.969
chr2	23422359	23422457	reg1014392.p1	8.912	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2155479	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-2155509	-	TSC_hg19_v1_chr2_-_21266818 AB587530 HM487065 M14081 M14162 BC051278	-2155587	-	NM_052920	185889	+	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	727538	-	TSC_hg19_v1_chr2_+_24150144 BC037901	727749	+	AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##HM487065|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14081|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14162|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC051278|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A	0.98995	CTCF.p2:-20:0.990
chr22	50161072	50161185	reg1012838.p1	8.912	+	AK124962 TSC_hg19_v1_chr22_-_50051168 BC033837 BC048207	-109995	-	AK125256 NM_015381 AK123443 AY358847	-1188967	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	-1275848	+	AF005067 NM_014577	57323	-	AK292428 TSC_hg19_v1_chr22_-_50221332 BC030007 BC047508	60138	-	TSC_hg19_v1_chr22_-_50221517 AK304776	60353	-	AK124962|C22orf34|348645|chromosome 22 open reading frame 34##BC048207|C22orf34|348645|chromosome 22 open reading frame 34##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF005067|BRD1|23774|bromodomain containing 1##NM_014577|BRD1|23774|bromodomain containing 1##AK292428|BRD1|23774|bromodomain containing 1##BC030007|BRD1|23774|bromodomain containing 1##BC047508|BRD1|23774|bromodomain containing 1##AK304776|BRD1|23774|bromodomain containing 1	0.795986	CTCF.p2:2:0.796
chr7	136091064	136091189	reg1017647.p1	8.912	+	BC013989 TSC_hg19_v1_chr7_-_135662202 NM_001128619 NM_145808	-428924	-	TSC_hg19_v1_chr7_-_135662107 AF106075 AL834231 BC028093 AK309816 AK056225	-429036	-	AB489167 AM393216 AM393266 TSC_hg19_v1_chr7_-_135661945	-429230	-	AY034603 AY219704 NM_001006627 NM_001006630 AK290236 AL832585	462280	+	AK125233 AY034604 AY456125 AY456126 AY456127 NM_000739 NM_001006631 NM_001006632 AY219705 NM_001006626 AY219703 NM_001006629 AY034605 NM_001006628 TSC_hg19_v1_chr7_+_136554002	462791	+	TSC_hg19_v1_chr7_-_137028305 D90226	937177	-	NM_001128619|LUZP6|767558|leucine zipper protein 6##NM_145808|MTPN|136319|myotrophin##AF106075|MTPN|136319|myotrophin##AL834231|MTPN|136319|myotrophin##BC028093|MTPN|136319|myotrophin##AK309816|MTPN|136319|myotrophin##AK056225|MTPN|136319|myotrophin##AM393216|MTPN|136319|myotrophin##AM393266|MTPN|136319|myotrophin##AY034603|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219704|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006627|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006630|CHRM2|1129|cholinergic receptor, muscarinic 2##AK290236|CHRM2|1129|cholinergic receptor, muscarinic 2##AL832585|CHRM2|1129|cholinergic receptor, muscarinic 2##AK125233|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034604|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456125|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456126|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456127|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_000739|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006631|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006632|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219705|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006626|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219703|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006629|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034605|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006628|CHRM2|1129|cholinergic receptor, muscarinic 2##D90226|PTN|5764|pleiotrophin	0.854048	CTCF.p2:9:0.854
chr16	15915832	15915926	reg1012212.p1	8.911	+	TSC_hg19_v1_chr16_-_15835382 D10667	-80432	-	BX641087 TSC_hg19_v1_chr16_-_15833973	-81924	-	NM_017668 BC001421 TSC_hg19_v1_chr16_+_15744101 AK000108 AK025815	-171772	+	BC101677 BC104906 BC143364 AB020673 AY520816 AY520817 TSC_hg19_v1_chr16_-_15950886 AK308389 BC031040 EU489063 NM_001040113 NM_001040114 NM_002474 NM_022844	34990	-	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	66574	-	AL832498 TSC_hg19_v1_chr16_-_15982471	66606	-	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle##BX641087|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_017668|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC001421|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK000108|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK025815|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC101677|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC104906|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC143364|MYH11|4629|myosin, heavy chain 11, smooth muscle##AB020673|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520816|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520817|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK308389|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC031040|MYH11|4629|myosin, heavy chain 11, smooth muscle##EU489063|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040113|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040114|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_002474|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_022844|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##AL832498|FOPNL|123811|FGFR1OP N-terminal like	0.78117	CTCF.p2:-4:0.781
chr19	11236877	11237037	reg1014743.p1	8.911	+	TSC_hg19_v1_chr19_+_11200148 AB209409 BC014514 AY114155 AB384938 DQ893879 BT007361	-36772	+	TSC_hg19_v1_chr19_+_11200138 AK295612 AK296312 AK299038 AK300313	-36825	+	NM_000527 NM_001195798 NM_001195799 NM_001195800 NM_001195802 NM_001195803 TSC_hg19_v1_chr19_+_11200115	-36880	+	AY456387 TSC_hg19_v1_chr19_-_11266459 AK075287 AK303157 AK303266 BC105037 BC105039 NM_182513	29510	-	AB528156 AY639929 CU687364 NM_015493	68268	-	TSC_hg19_v1_chr19_-_11308222 BC082762 AB284125 NM_001136191	71301	-	AB209409|LDLR|3949|low density lipoprotein receptor##BC014514|LDLR|3949|low density lipoprotein receptor##AY114155|LDLR|3949|low density lipoprotein receptor##DQ893879|LDLR|3949|low density lipoprotein receptor##BT007361|LDLR|3949|low density lipoprotein receptor##AK295612|LDLR|3949|low density lipoprotein receptor##AK296312|LDLR|3949|low density lipoprotein receptor##AK299038|LDLR|3949|low density lipoprotein receptor##AK300313|LDLR|3949|low density lipoprotein receptor##NM_000527|LDLR|3949|low density lipoprotein receptor##NM_001195798|LDLR|3949|low density lipoprotein receptor##NM_001195799|LDLR|3949|low density lipoprotein receptor##NM_001195800|LDLR|3949|low density lipoprotein receptor##NM_001195802|LDLR|3949|low density lipoprotein receptor##NM_001195803|LDLR|3949|low density lipoprotein receptor##AY456387|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK075287|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK303157|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK303266|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC105037|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC105039|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_182513|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2##BC082762|KANK2|25959|KN motif and ankyrin repeat domains 2##AB284125|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_001136191|KANK2|25959|KN motif and ankyrin repeat domains 2	0.999749	CTCF.p2:0:1.000
chr8	10399727	10399822	reg1013079.p1	8.911	+	BC033497 NM_001197020 NM_198464 AY358867	-16707	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	-446711	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	-487895	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	112866	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	130385	+	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	188210	-	BC033497|PRSS55|203074|protease, serine, 55##NM_001197020|PRSS55|203074|protease, serine, 55##NM_198464|PRSS55|203074|protease, serine, 55##AY358867|PRSS55|203074|protease, serine, 55##AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7	0.017662	
chr20	37360235	37360365	reg1014291.p1	8.909	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-7141	+	NM_080552 TSC_hg19_v1_chr20_+_37353115	-7188	+	TSC_hg19_v1_chr20_+_37230452 NM_001164431	-129787	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	16812	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	74054	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	194689	+	AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##NM_080552|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##NM_001164431|ARHGAP40|343578|Rho GTPase activating protein 40##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D	0.670633	CTCF.p2:5:0.671
chr3	169480825	169480945	reg1013961.p1	8.909	+	BC069498 GQ352634 U43292 AK304098 NM_001205194 NM_004991	-99396	-	BX640908 NM_001164000	-615364	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	-616523	-	BC128029 TSC_hg19_v1_chr3_-_169482848	1963	-	BC007289 AK055346 NM_032487	6757	-	TSC_hg19_v1_chr3_+_169490577 AK092022	9711	+	BC069498|MECOM|2122|MDS1 and EVI1 complex locus##GQ352634|MECOM|2122|MDS1 and EVI1 complex locus##U43292|MECOM|2122|MDS1 and EVI1 complex locus##AK304098|MECOM|2122|MDS1 and EVI1 complex locus##NM_001205194|MECOM|2122|MDS1 and EVI1 complex locus##NM_004991|MECOM|2122|MDS1 and EVI1 complex locus##BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BC128029|TERC|7012|telomerase RNA component##BC007289|ARPM1|84517|actin related protein M1##AK055346|ARPM1|84517|actin related protein M1##NM_032487|ARPM1|84517|actin related protein M1##AK092022|MYNN|55892|myoneurin	0.327969	CTCF.p2:2:0.328
chr10	104182549	104182659	reg1012958.p2	8.908	+	NM_024326 BC036120	-3025	+	BC039259 TSC_hg19_v1_chr10_-_104179472 AF452641	-3133	-	AB095931 NM_002779 TSC_hg19_v1_chr10_-_104178917	-3696	-	TSC_hg19_v1_chr10_-_104192345 AK094695 BC000262	9736	-	TSC_hg19_v1_chr10_-_104192372 NM_024040	9783	-	BC126459 AK024342 NM_024886	28667	-	NM_024326|FBXL15|79176|F-box and leucine-rich repeat protein 15##BC036120|FBXL15|79176|F-box and leucine-rich repeat protein 15##BC039259|PSD|5662|pleckstrin and Sec7 domain containing##AF452641|PSD|5662|pleckstrin and Sec7 domain containing##AB095931|PSD|5662|pleckstrin and Sec7 domain containing##NM_002779|PSD|5662|pleckstrin and Sec7 domain containing##BC000262|CUEDC2|79004|CUE domain containing 2##NM_024040|CUEDC2|79004|CUE domain containing 2##BC126459|C10orf95|79946|chromosome 10 open reading frame 95##AK024342|C10orf95|79946|chromosome 10 open reading frame 95##NM_024886|C10orf95|79946|chromosome 10 open reading frame 95	0.939515	CTCF.p2:12:0.880
chr3	136477439	136477576	reg1017908.p1	8.908	+	TSC_hg19_v1_chr3_-_136471221 BC040708 AB210023 AK309934 BC064699 CR749247 NM_005862	-6292	-	S67325 TSC_hg19_v1_chr3_+_135969193 BC013768 AB209009 BC053661 AK295312 AK130359 AK225733 AK303079 AK225215 AL831978 CU680676	-508305	+	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	-508343	+	BC050423 NM_001097599 NM_001097600 NM_025246 TSC_hg19_v1_chr3_+_136537897 BC022557 AK314079 BC000111 AL136661	60412	+	TSC_hg19_v1_chr3_+_136581071 NM_006153 BC006403	103533	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	103585	+	BC040708|STAG1|10274|stromal antigen 1##AB210023|STAG1|10274|stromal antigen 1##AK309934|STAG1|10274|stromal antigen 1##BC064699|STAG1|10274|stromal antigen 1##CR749247|STAG1|10274|stromal antigen 1##NM_005862|STAG1|10274|stromal antigen 1##S67325|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC013768|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AB209009|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC053661|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK295312|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK130359|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225733|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK303079|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225215|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AL831978|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC050423|TMEM22|80723|transmembrane protein 22##NM_001097599|TMEM22|80723|transmembrane protein 22##NM_001097600|TMEM22|80723|transmembrane protein 22##NM_025246|TMEM22|80723|transmembrane protein 22##BC022557|TMEM22|80723|transmembrane protein 22##AK314079|TMEM22|80723|transmembrane protein 22##BC000111|TMEM22|80723|transmembrane protein 22##AL136661|TMEM22|80723|transmembrane protein 22##NM_006153|NCK1|4690|NCK adaptor protein 1##BC006403|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1	0.513765	CTCF.p2:12:0.503
chr14	24685269	24685378	reg1015019.p1	8.907	+	TSC_hg19_v1_chr14_-_24685273 BC009495 BX161512 AK092821 AX747749 AK312038 BC051382 BC046912 NM_001199821 NM_001199822 NM_138476	-112	-	BC113533 BC113535 BC143834 NM_014169	-2288	-	TSC_hg19_v1_chr14_-_24682695 AB100262 BC010893 AK300118 AF161483 BC107699 HQ258138	-2603	-	AB528959 CR407662 BC038290 TSC_hg19_v1_chr14_-_24701555	16191	-	TSC_hg19_v1_chr14_-_24701559 BC064899 BC104200 BC104201	16236	-	TSC_hg19_v1_chr14_-_24701574 D23662 BC104664 NM_001199823 NM_006156	16250	-	BC009495|MDP1|145553|magnesium-dependent phosphatase 1##AK092821|MDP1|145553|magnesium-dependent phosphatase 1##AK312038|MDP1|145553|magnesium-dependent phosphatase 1##BC051382|MDP1|145553|magnesium-dependent phosphatase 1##BC046912|MDP1|145553|magnesium-dependent phosphatase 1##NM_001199821|MDP1|145553|magnesium-dependent phosphatase 1##NM_001199822|MDP1|145553|magnesium-dependent phosphatase 1##NM_138476|MDP1|145553|magnesium-dependent phosphatase 1##BC113533|CHMP4A|29082|charged multivesicular body protein 4A##BC113535|CHMP4A|29082|charged multivesicular body protein 4A##BC143834|CHMP4A|29082|charged multivesicular body protein 4A##NM_014169|CHMP4A|29082|charged multivesicular body protein 4A##AB100262|CHMP4A|29082|charged multivesicular body protein 4A##BC010893|CHMP4A|29082|charged multivesicular body protein 4A##AF161483|CHMP4A|29082|charged multivesicular body protein 4A##BC107699|CHMP4A|29082|charged multivesicular body protein 4A##HQ258138|CHMP4A|29082|charged multivesicular body protein 4A##CR407662|NEDD8|4738|neural precursor cell expressed, developmentally down-regulated 8##BC038290|NEDD8|4738|neural precursor cell expressed, developmentally down-regulated 8##BC064899|NEDD8|4738|neural precursor cell expressed, developmentally down-regulated 8##BC104200|NEDD8|4738|neural precursor cell expressed, developmentally down-regulated 8##BC104201|NEDD8|4738|neural precursor cell expressed, developmentally down-regulated 8##D23662|NEDD8|4738|neural precursor cell expressed, developmentally down-regulated 8##BC104664|NEDD8|4738|neural precursor cell expressed, developmentally down-regulated 8##NM_001199823|NEDD8-MDP1|100528064|NEDD8-MDP1 readthrough##NM_006156|NEDD8|4738|neural precursor cell expressed, developmentally down-regulated 8	0.753066	CTCF.p2:-12:0.732
chr3	46129524	46129633	reg1011607.p1	8.907	+	AB189434 AB189435 NM_001024644 NM_005283	-60600	-	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	-92257	-	NM_006564 Y13248	-144606	+	BC064991 TSC_hg19_v1_chr3_-_46249804 L10918 BC051306 NM_001295	120231	-	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	154338	+	AK292685 NM_001123041 NM_001123396	265651	+	AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##BC064991|CCR1|1230|chemokine (C-C motif) receptor 1##L10918|CCR1|1230|chemokine (C-C motif) receptor 1##BC051306|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001295|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2	0.13591	
chr9	96067285	96067407	reg1016112.p1	8.907	+	AJ242724 NM_006648 AB051547 AB463351	-120114	+	BT007164 CU690562 U72661 U91512 BC019336 BC004440 BC000298 TSC_hg19_v1_chr9_-_95896534 BC048212 NM_004148	-170804	-	BC091476 TSC_hg19_v1_chr9_+_95858566	-208767	+	NM_001098808 TSC_hg19_v1_chr9_-_96108726	41364	-	BC080634 TSC_hg19_v1_chr9_-_96213799 BC037551 BC063650 BC038803	146442	-	BC046183 TSC_hg19_v1_chr9_-_96213849	146501	-	AJ242724|WNK2|65268|WNK lysine deficient protein kinase 2##NM_006648|WNK2|65268|WNK lysine deficient protein kinase 2##AB051547|WNK2|65268|WNK lysine deficient protein kinase 2##BT007164|NINJ1|4814|ninjurin 1##U72661|NINJ1|4814|ninjurin 1##U91512|NINJ1|4814|ninjurin 1##BC019336|NINJ1|4814|ninjurin 1##BC004440|NINJ1|4814|ninjurin 1##BC000298|NINJ1|4814|ninjurin 1##BC048212|NINJ1|4814|ninjurin 1##NM_004148|NINJ1|4814|ninjurin 1##BC091476|C9orf89|84270|chromosome 9 open reading frame 89##NM_001098808|C9orf129|445577|chromosome 9 open reading frame 129##BC080634|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC037551|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC063650|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC038803|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC046183|FAM120AOS|158293|family with sequence similarity 120A opposite strand	0.745349	CTCF.p2:-3:0.745
chrX	77280360	77280472	reg1012369.p1	8.907	+	NM_001029891 AB528771	-55280	-	AB117973 TSC_hg19_v1_chrX_+_77166237 AK096667 AB208828	-114174	+	TSC_hg19_v1_chrX_+_77166193 AK310748 NM_000052 L06133	-114223	+	NM_000291 TSC_hg19_v1_chrX_+_77359707	79271	+	TSC_hg19_v1_chrX_+_77359742 AK301632 AK303848 AK291081 AK295014 AK295182 AK298855 AK310756 AK312280 BC103752 D28371	79315	+	TSC_hg19_v1_chrX_+_77359756 V00572	79340	+	NM_001029891|PGAM4|441531|phosphoglycerate mutase family member 4##AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##NM_000291|PGK1|5230|phosphoglycerate kinase 1##AK301632|PGK1|5230|phosphoglycerate kinase 1##AK303848|PGK1|5230|phosphoglycerate kinase 1##AK291081|PGK1|5230|phosphoglycerate kinase 1##AK295014|PGK1|5230|phosphoglycerate kinase 1##AK295182|PGK1|5230|phosphoglycerate kinase 1##AK298855|PGK1|5230|phosphoglycerate kinase 1##AK310756|PGK1|5230|phosphoglycerate kinase 1##AK312280|PGK1|5230|phosphoglycerate kinase 1##BC103752|PGK1|5230|phosphoglycerate kinase 1##D28371|PGK1|5230|phosphoglycerate kinase 1##V00572|PGK1|5230|phosphoglycerate kinase 1	0.99089	CTCF.p2:20:0.991
chr2	207029111	207029262	reg1012840.p1	8.906	+	TSC_hg19_v1_chr2_+_207024617 AK291910 AK310096 D28350 BC067787 BC029316 BC004931 AB529032 CU688340 BT007079 CR456825	-4528	+	S81522 X60656 TSC_hg19_v1_chr2_+_207024348 BC000211 X60489	-4787	+	NM_001037663 NM_001959 NM_021121 TSC_hg19_v1_chr2_+_207024320	-4868	+	AK312917 BC067833 AK290976 NM_001098199 NM_005279	53512	-	TSC_hg19_v1_chr2_+_207139414 AK127271 NM_020923	110281	+	TSC_hg19_v1_chr2_+_207308286 AB009672 NM_003812 BC132763 BC132765	279147	+	AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##D28350|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##S81522|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##X60656|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC000211|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##X60489|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##NM_001037663|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##NM_001959|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##NM_021121|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##AK312917|GPR1|2825|G protein-coupled receptor 1##BC067833|GPR1|2825|G protein-coupled receptor 1##AK290976|GPR1|2825|G protein-coupled receptor 1##NM_001098199|GPR1|2825|G protein-coupled receptor 1##NM_005279|GPR1|2825|G protein-coupled receptor 1##AK127271|ZDBF2|57683|zinc finger, DBF-type containing 2##NM_020923|ZDBF2|57683|zinc finger, DBF-type containing 2##AB009672|ADAM23|8745|ADAM metallopeptidase domain 23##NM_003812|ADAM23|8745|ADAM metallopeptidase domain 23##BC132763|ADAM23|8745|ADAM metallopeptidase domain 23##BC132765|ADAM23|8745|ADAM metallopeptidase domain 23	0.999343	CTCF.p2:-9:0.999
chr2	72806822	72806961	reg1016446.p1	8.906	+	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	-431949	-	AK295683 TSC_hg19_v1_chr2_-_72371202	-435692	-	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-1112998	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	246213	-	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	307639	+	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	337762	+	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1	0.872493	CTCF.p2:12:0.872
chr11	14929414	14929517	reg1014784.p1	8.905	+	AK054728 TSC_hg19_v1_chr11_+_14926557	-2916	+	AY323817 NM_024514 BC104907 BC104909	-15692	-	BC052580 BC111070 TSC_hg19_v1_chr11_-_14913218 AK312019 BC084557	-16231	-	M26095 X03662 M64486 BC093753 BC101599 BC143562 BC069684 BC069704 BC069760 BC069778 NM_001033952 NM_001033953 NM_001741 X00356	64355	-	BC008428 AK291188 BC092468 NM_000728	165661	+	AB236159 NM_001031853	204504	+	AK054728|CALCB|797|calcitonin-related polypeptide beta##AY323817|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##NM_024514|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104907|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104909|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC052580|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC111070|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##M26095|CALCA|796|calcitonin-related polypeptide alpha##X03662|CALCA|796|calcitonin-related polypeptide alpha##M64486|CALCA|796|calcitonin-related polypeptide alpha##BC093753|CALCA|796|calcitonin-related polypeptide alpha##BC101599|CALCA|796|calcitonin-related polypeptide alpha##BC143562|CALCA|796|calcitonin-related polypeptide alpha##BC069684|CALCA|796|calcitonin-related polypeptide alpha##BC069704|CALCA|796|calcitonin-related polypeptide alpha##BC069760|CALCA|796|calcitonin-related polypeptide alpha##BC069778|CALCA|796|calcitonin-related polypeptide alpha##NM_001033952|CALCA|796|calcitonin-related polypeptide alpha##NM_001033953|CALCA|796|calcitonin-related polypeptide alpha##NM_001741|CALCA|796|calcitonin-related polypeptide alpha##X00356|CALCA|796|calcitonin-related polypeptide alpha##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)	0.839285	CTCF.p2:-1:0.839
chr1	153261245	153261392	reg1017422.p1	8.905	+	BC108290 NM_000427	-29140	+	NM_001195571	-71259	+	NM_001010857 BC130507 BC130511 BC087854	-85377	+	BC128114 BC128115 BC069741 BC069798 BC069801 AY035376 NM_052891	21861	-	AY035377 NM_020393 AF242518	59714	-	AK311882 NM_002965 X06233 TSC_hg19_v1_chr1_+_153330329 BC047681 AF086362	69020	+	BC108290|LOR|4014|loricrin##NM_000427|LOR|4014|loricrin##NM_001195571|PRR9|574414|proline rich 9##NM_001010857|LELP1|149018|late cornified envelope-like proline-rich 1##BC130507|LELP1|149018|late cornified envelope-like proline-rich 1##BC130511|LELP1|149018|late cornified envelope-like proline-rich 1##BC087854|LELP1|149018|late cornified envelope-like proline-rich 1##BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3##BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3##NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035377|PGLYRP4|57115|peptidoglycan recognition protein 4##NM_020393|PGLYRP4|57115|peptidoglycan recognition protein 4##AF242518|PGLYRP4|57115|peptidoglycan recognition protein 4##AK311882|S100A9|6280|S100 calcium binding protein A9##NM_002965|S100A9|6280|S100 calcium binding protein A9##X06233|S100A9|6280|S100 calcium binding protein A9##BC047681|S100A9|6280|S100 calcium binding protein A9##AF086362|S100A9|6280|S100 calcium binding protein A9	0.955012	CTCF.p2:7:0.955
chr14	65486791	65486918	reg1012249.p1	8.905	+	BC035148 BC052775 TSC_hg19_v1_chr14_+_65453967	-32888	+	TSC_hg19_v1_chr14_+_65453605 BC013574 AK225917 L00635 BC020232 BX248269 DQ892128 DQ895321	-33217	+	AK315714 NM_002028 TSC_hg19_v1_chr14_+_65453591	-33335	+	AB463901 AY353088 CR542191 CU693010 X60287 M64240 AK292630 AK292189 BC003525 BC004516 AK290130 TSC_hg19_v1_chr14_-_65569205 BC036092 BC027924 BC025685	82278	-	TSC_hg19_v1_chr14_-_65569238 BC013669 NM_002382 NM_145112 NM_145113 NM_145114 NM_145116 NM_197957 AK290929 AL833643	82384	-	AJ536056 NM_004480 NM_178155 NM_178156	390455	+	BC013574|FNTB|2342|farnesyltransferase, CAAX box, beta##AK225917|FNTB|2342|farnesyltransferase, CAAX box, beta##L00635|FNTB|2342|farnesyltransferase, CAAX box, beta##BC020232|FNTB|2342|farnesyltransferase, CAAX box, beta##BX248269|FNTB|2342|farnesyltransferase, CAAX box, beta##DQ892128|FNTB|2342|farnesyltransferase, CAAX box, beta##DQ895321|FNTB|2342|farnesyltransferase, CAAX box, beta##AK315714|FNTB|2342|farnesyltransferase, CAAX box, beta##NM_002028|FNTB|2342|farnesyltransferase, CAAX box, beta##AY353088|MAX|4149|MYC associated factor X##CR542191|MAX|4149|MYC associated factor X##X60287|MAX|4149|MYC associated factor X##M64240|MAX|4149|MYC associated factor X##AK292630|MAX|4149|MYC associated factor X##AK292189|MAX|4149|MYC associated factor X##BC003525|MAX|4149|MYC associated factor X##BC004516|MAX|4149|MYC associated factor X##AK290130|MAX|4149|MYC associated factor X##BC036092|MAX|4149|MYC associated factor X##BC027924|MAX|4149|MYC associated factor X##BC025685|MAX|4149|MYC associated factor X##BC013669|MAX|4149|MYC associated factor X##NM_002382|MAX|4149|MYC associated factor X##NM_145112|MAX|4149|MYC associated factor X##NM_145113|MAX|4149|MYC associated factor X##NM_145114|MAX|4149|MYC associated factor X##NM_145116|MAX|4149|MYC associated factor X##NM_197957|MAX|4149|MYC associated factor X##AK290929|MAX|4149|MYC associated factor X##AL833643|MAX|4149|MYC associated factor X##AJ536056|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_004480|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178155|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178156|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	0.993389	CTCF.p2:28:0.993
chr3	111387886	111388040	reg1013932.p1	8.905	+	NM_024508	-73782	-	AK290719 AK315237 TSC_hg19_v1_chr3_+_111261063 AL833681 CU676690	-126896	+	NM_005816 NM_198196 TSC_hg19_v1_chr3_+_111260970 BC020749 BC027914	-126997	+	AK056141 NM_001185106 NM_153268 TSC_hg19_v1_chr3_+_111393527	5562	+	AK296841 NM_001134437 TSC_hg19_v1_chr3_+_111451348 CR749654 AK307491	63382	+	NM_001134438 NM_145753 AK096151 TSC_hg19_v1_chr3_+_111578114 AK315050	190108	+	NM_024508|ZBED2|79413|zinc finger, BED-type containing 2##AK290719|CD96|10225|CD96 molecule##AK315237|CD96|10225|CD96 molecule##AL833681|CD96|10225|CD96 molecule##NM_005816|CD96|10225|CD96 molecule##NM_198196|CD96|10225|CD96 molecule##BC020749|CD96|10225|CD96 molecule##BC027914|CD96|10225|CD96 molecule##AK056141|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_001185106|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_153268|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##AK296841|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001134437|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##CR749654|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK307491|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001134438|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_145753|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK096151|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK315050|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	0.885173	CTCF.p2:-7:0.885
chr5	148494375	148494490	reg1015943.p1	8.905	+	AB075865 AL832651 AK300420 TSC_hg19_v1_chr5_-_148442626 BC113879 BC114486 AY341075 AB070620 NM_024577	-51761	-	NM_000024 TSC_hg19_v1_chr5_+_148206185 AK313151 BC012481 AK223025 BC073856 BC063486 X04827	-288246	+	AK308471 TSC_hg19_v1_chr5_-_148034091	-460342	-	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	26758	+	TSC_hg19_v1_chr5_+_148651421 NM_001146337 NM_152406 BC040723	156982	+	TSC_hg19_v1_chr5_+_148651443 AK095980 AK074185 BC125093 BC125094	157030	+	AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface##X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3##NM_001146337|AFAP1L1|134265|actin filament associated protein 1-like 1##NM_152406|AFAP1L1|134265|actin filament associated protein 1-like 1##BC040723|AFAP1L1|134265|actin filament associated protein 1-like 1##AK095980|AFAP1L1|134265|actin filament associated protein 1-like 1##AK074185|AFAP1L1|134265|actin filament associated protein 1-like 1##BC125093|AFAP1L1|134265|actin filament associated protein 1-like 1##BC125094|AFAP1L1|134265|actin filament associated protein 1-like 1	0.66416	CTCF.p2:9:0.664
chr6	80658993	80659105	reg1013830.p1	8.905	+	TSC_hg19_v1_chr6_-_80656870 CU691582 DQ891229 AF277094 BC038506 AY037298 AK310625 AK312511 AK055277 DQ426871 NM_022726	-1957	-	NM_001243308	-78913	-	TSC_hg19_v1_chr6_+_80341019 AF340151 NM_031469 BC109043 BC109044 AK311757 BC040489 AK074506 BC052987 BC060799 BC070059 AJ297972	-317975	+	NM_001166691 NM_003318 TSC_hg19_v1_chr6_+_80714370 AX775733 BC032858 BC000633 AK292460	55303	+	TSC_hg19_v1_chr6_+_80714390 AK315696	55350	+	TSC_hg19_v1_chr6_+_80816367 NM_000056 NM_183050 AK304353 U50708	157278	+	DQ891229|ELOVL4|6785|ELOVL fatty acid elongase 4##AF277094|ELOVL4|6785|ELOVL fatty acid elongase 4##BC038506|ELOVL4|6785|ELOVL fatty acid elongase 4##AY037298|ELOVL4|6785|ELOVL fatty acid elongase 4##AK310625|ELOVL4|6785|ELOVL fatty acid elongase 4##AK312511|ELOVL4|6785|ELOVL fatty acid elongase 4##AK055277|ELOVL4|6785|ELOVL fatty acid elongase 4##DQ426871|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_022726|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7##AF340151|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_031469|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109043|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109044|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK311757|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC040489|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK074506|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC052987|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC060799|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC070059|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AJ297972|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_001166691|TTK|7272|TTK protein kinase##NM_003318|TTK|7272|TTK protein kinase##AX775733|TTK|7272|TTK protein kinase##BC032858|TTK|7272|TTK protein kinase##BC000633|TTK|7272|TTK protein kinase##AK292460|TTK|7272|TTK protein kinase##AK315696|TTK|7272|TTK protein kinase##NM_000056|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##NM_183050|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK304353|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##U50708|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide	0.761196	CTCF.p2:-4:0.761
chr20	7840082	7840223	reg1017058.p1	8.904	+	BC069214 NM_001200	-1091408	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-1735989	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-1736275	-	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	80950	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	160148	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	160255	-	BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4	0.874205	CTCF.p2:16:0.874
chr4	178476264	178476411	reg1015265.p1	8.904	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-112694	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-112744	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-112796	-	TSC_hg19_v1_chr4_+_183065111 AK308489	4588788	+	NM_001080477 HE578284 HE578285	4768817	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	5362193	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.986695	CTCF.p2:-17:0.987
chr5	58330359	58330481	reg1013860.p1	8.904	+	BC036319 NM_001197223	-34662	-	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	-451501	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	-543126	+	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	4958	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	241510	-	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	322323	-	BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.0	
chr15	25753717	25753827	reg1014663.p1	8.903	+	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	-69594	-	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	-69671	-	L07557 NM_130838	-103123	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	354581	-	AB051358 TSC_hg19_v1_chr15_-_26108932	355128	-	AK295167 NM_001191321 TSC_hg19_v1_chr15_-_26874238 BC038837	1120508	-	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##AB051358|ATP10A|57194|ATPase, class V, type 10A##AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	0.978548	CTCF.p2:-21:0.979
chr1	78610863	78610979	reg1012975.p1	8.903	+	TSC_hg19_v1_chr1_+_78511749 AK225941 AB073737 AB528004 CU690284	-99159	+	BC036075 NM_017655 TSC_hg19_v1_chr1_+_78511713	-99258	+	TSC_hg19_v1_chr1_+_78470622 U40992 AK313205 AB209922 BC034721 NM_007034	-140307	+	NM_000959 NM_001039585 AK292845 AK312816 AY485530 L24470 BC112965 AF004021	345863	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	475210	+	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	504577	+	AK225941|GIPC2|54810|GIPC PDZ domain containing family, member 2##AB073737|GIPC2|54810|GIPC PDZ domain containing family, member 2##BC036075|GIPC2|54810|GIPC PDZ domain containing family, member 2##NM_017655|GIPC2|54810|GIPC PDZ domain containing family, member 2##U40992|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##AK313205|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##AB209922|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##BC034721|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##NM_007034|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##NM_000959|PTGFR|5737|prostaglandin F receptor (FP)##NM_001039585|PTGFR|5737|prostaglandin F receptor (FP)##AK292845|PTGFR|5737|prostaglandin F receptor (FP)##AK312816|PTGFR|5737|prostaglandin F receptor (FP)##AY485530|PTGFR|5737|prostaglandin F receptor (FP)##L24470|PTGFR|5737|prostaglandin F receptor (FP)##BC112965|PTGFR|5737|prostaglandin F receptor (FP)##AF004021|PTGFR|5737|prostaglandin F receptor (FP)##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44	0.990672	CTCF.p2:-2:0.991
chr2	196363026	196363151	reg1013941.p1	8.903	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-3303459	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	-3303774	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-3651117	-	BC029413 NM_001127257 CR749813	158487	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	158820	+	AB463018 AF327442 AK094515 NM_018897 AB023161	570407	-	BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7	0.995462	CTCF.p2:7:0.995
chr2	202047669	202047831	reg1014538.p1	8.903	+	NM_001206524 NM_001206542 NM_001230 NM_032974 NM_032976 NM_032977	-130	+	AF041459 NM_001202515	-42753	+	NM_001202518 AK304585 AF041462	-50028	+	TSC_hg19_v1_chr2_+_202047863 AK310746 U86214 AK304859 AK225475 AY690601 BC042844 U60519 AJ487678 AJ487679	110	+	NM_001080124 NM_001228 NM_033355 NM_033358 AF422927 AF422928 BC010390 AK310630 BC017031 U60520 X98176	50475	+	NM_001080125 AF422926 BC068050 AF422925 AF422929 X98172 AY429525	75047	+	NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AF041459|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202515|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202518|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK304585|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF041462|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001080124|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001228|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033355|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033358|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422927|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422928|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC010390|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310630|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC017031|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##U60520|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98176|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001080125|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422926|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC068050|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422929|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98172|CASP8|841|caspase 8, apoptosis-related cysteine peptidase	0.0	
chr5	137515991	137516142	reg1014078.p1	8.903	+	TSC_hg19_v1_chr5_+_137514857 AK296879 AK025790 AF153329 BC012999	-1251	+	NM_005733	-1650	+	BC008039 BC008076 AB384833 AB209079 TSC_hg19_v1_chr5_-_137514319 AK310380 AK289951 AK293621 AK297756 AK299694 AK312333 AK225928 AL136823 NM_001164326 NM_006696 NM_139199	-1733	-	AF191341 BT009810 AB590268 DQ891686 DQ894870 TSC_hg19_v1_chr5_-_137549013 BC017713 AF053977 BC005258 BC010944 AK291610 AB011472 AK223250	32937	-	AK304635 TSC_hg19_v1_chr5_-_137549034 NM_004661	32965	-	AF051767 DQ890850 DQ894004 BC037951 AY358997 AK314022 AK297693 NM_001496 AY359037 TSC_hg19_v1_chr5_-_137610343	94162	-	AK296879|KIF20A|10112|kinesin family member 20A##AK025790|KIF20A|10112|kinesin family member 20A##AF153329|KIF20A|10112|kinesin family member 20A##BC012999|KIF20A|10112|kinesin family member 20A##NM_005733|KIF20A|10112|kinesin family member 20A##BC008039|BRD8|10902|bromodomain containing 8##BC008076|BRD8|10902|bromodomain containing 8##AB209079|BRD8|10902|bromodomain containing 8##AK310380|BRD8|10902|bromodomain containing 8##AK289951|BRD8|10902|bromodomain containing 8##AK293621|BRD8|10902|bromodomain containing 8##AK297756|BRD8|10902|bromodomain containing 8##AK312333|BRD8|10902|bromodomain containing 8##AK225928|BRD8|10902|bromodomain containing 8##AL136823|BRD8|10902|bromodomain containing 8##NM_001164326|BRD8|10902|bromodomain containing 8##NM_006696|BRD8|10902|bromodomain containing 8##NM_139199|BRD8|10902|bromodomain containing 8##AF191341|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##BT009810|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##DQ891686|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##DQ894870|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##BC017713|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AF053977|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##BC005258|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##BC010944|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AK291610|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AB011472|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AK223250|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AK304635|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##NM_004661|CDC23|8697|cell division cycle 23 homolog (S. cerevisiae)##AF051767|GFRA3|2676|GDNF family receptor alpha 3##DQ890850|GFRA3|2676|GDNF family receptor alpha 3##DQ894004|GFRA3|2676|GDNF family receptor alpha 3##BC037951|GFRA3|2676|GDNF family receptor alpha 3##AY358997|GFRA3|2676|GDNF family receptor alpha 3##AK314022|GFRA3|2676|GDNF family receptor alpha 3##AK297693|GFRA3|2676|GDNF family receptor alpha 3##NM_001496|GFRA3|2676|GDNF family receptor alpha 3##AY359037|GFRA3|2676|GDNF family receptor alpha 3	0.934608	CTCF.p2:4:0.935
chr11	73087212	73087333	reg1014488.p1	8.902	+	TSC_hg19_v1_chr11_-_73020422 AK300095	-66849	-	BC137228 NM_014786 AF378754	-67607	+	TSC_hg19_v1_chr11_+_73019337 AK074500	-67868	+	TSC_hg19_v1_chr11_+_73087471 AK027899 NM_152222 BC051810 BC017279	165	+	TSC_hg19_v1_chr11_+_73087683 AF319553 NM_032871	419	+	D87470 TSC_hg19_v1_chr11_-_73309158 AK292054 EF197985 BC052341 EF363480 NM_015159	221926	-	AK300095|LOC100287837|100287837|uncharacterized LOC100287837##BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK027899|RELT|84957|RELT tumor necrosis factor receptor##NM_152222|RELT|84957|RELT tumor necrosis factor receptor##BC051810|RELT|84957|RELT tumor necrosis factor receptor##BC017279|RELT|84957|RELT tumor necrosis factor receptor##AF319553|RELT|84957|RELT tumor necrosis factor receptor##NM_032871|RELT|84957|RELT tumor necrosis factor receptor##D87470|FAM168A|23201|family with sequence similarity 168, member A##AK292054|FAM168A|23201|family with sequence similarity 168, member A##EF197985|FAM168A|23201|family with sequence similarity 168, member A##BC052341|FAM168A|23201|family with sequence similarity 168, member A##EF363480|FAM168A|23201|family with sequence similarity 168, member A##NM_015159|FAM168A|23201|family with sequence similarity 168, member A	0.085523	
chr3	58163537	58163690	reg1010651.p1	8.901	+	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	-169466	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-420411	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-484874	-	NM_004944	36784	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	59670	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	59917	+	AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6	0.322022	CTCF.p2:5:0.322
chr8	135051621	135051736	reg1015892.p1	8.901	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-467581	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-742181	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-848348	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	657116	-	TSC_hg19_v1_chr8_-_135725053 AB463359	673401	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	673596	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.990892	CTCF.p2:-11:0.991
chr14	93079538	93079668	reg1013287.p1	8.900	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-99644	+	NM_153646 AF520704 AF520705 BC069653	-289427	+	AK295059 NM_153647	-290067	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	39033	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	39220	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	135356	-	AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain	0.964049	CTCF.p2:28:0.945
chr6	138750228	138750344	reg1013865.p1	8.900	+	BC010290 TSC_hg19_v1_chr6_+_138725477 BC008205 BC093037 AF411610	-24741	+	TSC_hg19_v1_chr6_+_138725355 NM_014320 AF117616 BC016806 BC016807 AK057928 AY427823	-24901	+	BC069109 NM_021635 AF189269 AF189270	-210660	-	AK307584 NM_001144060 TSC_hg19_v1_chr6_-_138820579	70292	-	TSC_hg19_v1_chr6_-_138820580 AK092744 AX747703	70330	-	TSC_hg19_v1_chr6_-_138893682 NM_020464	143422	-	BC010290|HEBP2|23593|heme binding protein 2##BC008205|HEBP2|23593|heme binding protein 2##BC093037|HEBP2|23593|heme binding protein 2##AF411610|HEBP2|23593|heme binding protein 2##NM_014320|HEBP2|23593|heme binding protein 2##AF117616|HEBP2|23593|heme binding protein 2##BC016806|HEBP2|23593|heme binding protein 2##BC016807|HEBP2|23593|heme binding protein 2##AK057928|HEBP2|23593|heme binding protein 2##AY427823|HEBP2|23593|heme binding protein 2##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1##AK307584|NHSL1|57224|NHS-like 1##NM_001144060|NHSL1|57224|NHS-like 1##NM_020464|NHSL1|57224|NHS-like 1	0.99883	CTCF.p2:0:0.999
chr14	78121450	78121563	reg1014595.p1	8.899	+	AB011098 NM_004863 TSC_hg19_v1_chr14_-_78083124	-38380	-	Y08686 TSC_hg19_v1_chr14_-_78082981 BC005123	-38512	-	CU675001 DQ893297 DQ896786 TSC_hg19_v1_chr14_-_78082949	-38571	-	BC015024 X91992 TSC_hg19_v1_chr14_-_78174367 CU693074 DQ890543 DQ893703 BC025787 NM_006020 BX537699	52846	-	NM_031210 TSC_hg19_v1_chr14_+_78174435 AF271779	52924	+	TSC_hg19_v1_chr14_+_78174445 BC017895 AF253980 AJ272055 AY860853 HQ257938	52940	+	AB011098|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##NM_004863|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##Y08686|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##BC005123|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##DQ893297|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##DQ896786|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##BC015024|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##X91992|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##DQ890543|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##DQ893703|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##BC025787|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##NM_006020|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##BX537699|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##NM_031210|SLIRP|81892|SRA stem-loop interacting RNA binding protein##AF271779|SLIRP|81892|SRA stem-loop interacting RNA binding protein##BC017895|SLIRP|81892|SRA stem-loop interacting RNA binding protein##AF253980|SLIRP|81892|SRA stem-loop interacting RNA binding protein##AJ272055|SLIRP|81892|SRA stem-loop interacting RNA binding protein##AY860853|SLIRP|81892|SRA stem-loop interacting RNA binding protein##HQ257938|SLIRP|81892|SRA stem-loop interacting RNA binding protein	0.889449	CTCF.p2:1:0.889
chr19	49810144	49810266	reg1013123.p1	8.899	+	AK000048 TSC_hg19_v1_chr19_+_49669495	-140755	+	TSC_hg19_v1_chr19_+_49661048 AK074664 AF497623 AK292862 AY297044 AY297045 AY297046 AY046396 AJ575813 BC132727 BC144122 BC144123 AK295820	-149139	+	AK307897 NM_001195227 NM_017636 TSC_hg19_v1_chr19_+_49661029	-149192	+	BC034948 BC039336 NM_014037	18248	-	TSC_hg19_v1_chr19_+_49838662 AK301016	28453	+	TSC_hg19_v1_chr19_+_49838683 NM_001040031 NM_001774 AK301328	28473	+	AK000048|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AF497623|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK292862|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297044|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297045|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297046|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY046396|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AJ575813|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC132727|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144122|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144123|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK295820|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK307897|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_001195227|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_017636|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC034948|SLC6A16|28968|solute carrier family 6, member 16##NM_014037|SLC6A16|28968|solute carrier family 6, member 16##AK301016|CD37|951|CD37 molecule##NM_001040031|CD37|951|CD37 molecule##NM_001774|CD37|951|CD37 molecule##AK301328|CD37|951|CD37 molecule	0.109742	
chr20	61454252	61454357	reg1014414.p1	8.899	+	TSC_hg19_v1_chr20_+_61448401 BC011705 NM_001853 DQ892946 DQ896194 L41162	-5901	+	TSC_hg19_v1_chr20_+_61436186 NM_007346 AK314696 AK022234 AF109134 BC008768 BC014137 CU680798 DQ892943 EU176723 BC032666	-18111	+	AK001776 NM_018270 TSC_hg19_v1_chr20_+_61427832 BC014235 BC009889 BC018841 AB085682 AB463516	-26457	+	NM_080750	22171	+	AF070992 AB012124 BC065520 BC046933 NM_006602 TSC_hg19_v1_chr20_-_61493138	38752	-	TSC_hg19_v1_chr20_-_61557824 BC014615 BC014489	103517	-	BC011705|COL9A3|1299|collagen, type IX, alpha 3##NM_001853|COL9A3|1299|collagen, type IX, alpha 3##DQ892946|COL9A3|1299|collagen, type IX, alpha 3##DQ896194|COL9A3|1299|collagen, type IX, alpha 3##L41162|COL9A3|1299|collagen, type IX, alpha 3##NM_007346|OGFR|11054|opioid growth factor receptor##AK314696|OGFR|11054|opioid growth factor receptor##AK022234|OGFR|11054|opioid growth factor receptor##AF109134|OGFR|11054|opioid growth factor receptor##BC008768|OGFR|11054|opioid growth factor receptor##BC014137|OGFR|11054|opioid growth factor receptor##DQ892943|OGFR|11054|opioid growth factor receptor##EU176723|OGFR|11054|opioid growth factor receptor##BC032666|OGFR|11054|opioid growth factor receptor##AK001776|C20orf20|55257|chromosome 20 open reading frame 20##NM_018270|C20orf20|55257|chromosome 20 open reading frame 20##BC014235|C20orf20|55257|chromosome 20 open reading frame 20##BC009889|C20orf20|55257|chromosome 20 open reading frame 20##BC018841|C20orf20|55257|chromosome 20 open reading frame 20##AB085682|C20orf20|55257|chromosome 20 open reading frame 20##NM_080750|DPH3P1|100132911|DPH3, KTI11 homolog (S. cerevisiae) pseudogene 1##AF070992|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##AB012124|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC065520|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC046933|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##NM_006602|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC014615|DIDO1|11083|death inducer-obliterator 1##BC014489|DIDO1|11083|death inducer-obliterator 1	0.165809	
chr6	153269452	153269568	reg1012494.p2	8.899	+	AK313950 BC009794 NM_003381 NM_194435 AK291959 M36634	-197524	+	NM_025107 AF527367 AK024922 BC128463 BC128464 GU997693 AK021612 BC022556 AL834500 CU692694	-250405	+	AF495910 NM_182961	-310977	-	AY079515 DQ891922 DQ895106 BC018905 AF129535 TSC_hg19_v1_chr6_-_153304175 AK026197 AK314456 NM_012177	34637	-	AJ420499 TSC_hg19_v1_chr6_-_153304715 AK055221 NM_001142522	35154	-	TSC_hg19_v1_chr6_-_153323825 AK027684 CU676987 CU680090 AK001037 AK225321 AK225970 AK290662 BC014428	54302	-	AK313950|VIP|7432|vasoactive intestinal peptide##BC009794|VIP|7432|vasoactive intestinal peptide##NM_003381|VIP|7432|vasoactive intestinal peptide##NM_194435|VIP|7432|vasoactive intestinal peptide##AK291959|VIP|7432|vasoactive intestinal peptide##M36634|VIP|7432|vasoactive intestinal peptide##NM_025107|MYCT1|80177|myc target 1##AF527367|MYCT1|80177|myc target 1##AK024922|MYCT1|80177|myc target 1##BC128463|MYCT1|80177|myc target 1##BC128464|MYCT1|80177|myc target 1##GU997693|MYCT1|80177|myc target 1##AK021612|MYCT1|80177|myc target 1##BC022556|MYCT1|80177|myc target 1##AL834500|MYCT1|80177|myc target 1##AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AY079515|FBXO5|26271|F-box protein 5##DQ891922|FBXO5|26271|F-box protein 5##DQ895106|FBXO5|26271|F-box protein 5##BC018905|FBXO5|26271|F-box protein 5##AF129535|FBXO5|26271|F-box protein 5##AK026197|FBXO5|26271|F-box protein 5##AK314456|FBXO5|26271|F-box protein 5##NM_012177|FBXO5|26271|F-box protein 5##AJ420499|FBXO5|26271|F-box protein 5##AK055221|FBXO5|26271|F-box protein 5##NM_001142522|FBXO5|26271|F-box protein 5##AK027684|MTRF1L|54516|mitochondrial translational release factor 1-like##AK225321|MTRF1L|54516|mitochondrial translational release factor 1-like##AK225970|MTRF1L|54516|mitochondrial translational release factor 1-like##AK290662|MTRF1L|54516|mitochondrial translational release factor 1-like##BC014428|MTRF1L|54516|mitochondrial translational release factor 1-like	0.999407	CTCF.p2:1:0.999
chr20	14318354	14318467	reg1013498.p2	8.898	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-154	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-342074	+	AK131348 TSC_hg19_v1_chr20_+_13976161 NM_080676	-342304	+	BC018687 NM_001033087	859093	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	2235603	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	2392253	+	AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK131348|MACROD2|140733|MACRO domain containing 2##NM_080676|MACROD2|140733|MACRO domain containing 2##BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B	0.0	
chr20	50255917	50256035	reg1014292.p1	8.898	+	AK304147 AK226146 EU887575 EU887579 TSC_hg19_v1_chr20_-_50179379	-76592	-	EU887574 EU887577 NM_001136021	-76809	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	-96701	-	BC110591 BC110592 BC063701 TSC_hg19_v1_chr20_-_50314160	58102	-	TSC_hg19_v1_chr20_-_50384875 AB385363 AB014511 AK299064	128902	-	TSC_hg19_v1_chr20_-_50384925 NM_006045	128952	-	AK304147|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##AK226146|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887575|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887579|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC110591|ATP9A|10079|ATPase, class II, type 9A##BC110592|ATP9A|10079|ATPase, class II, type 9A##BC063701|ATP9A|10079|ATPase, class II, type 9A##AB014511|ATP9A|10079|ATPase, class II, type 9A##AK299064|ATP9A|10079|ATPase, class II, type 9A##NM_006045|ATP9A|10079|ATPase, class II, type 9A	0.0	
chr8	102135584	102135720	reg1014523.p1	8.897	+	TSC_hg19_v1_chr8_-_101965608 NM_003406	-170029	-	TSC_hg19_v1_chr8_-_101965595 M86400	-170076	-	TSC_hg19_v1_chr8_-_101965198 NM_001135699	-170426	-	BC035233 TSC_hg19_v1_chr8_-_102217845 BC015925 AF125099 AF275802 AF275809 AK290477 BC068524	82041	-	TSC_hg19_v1_chr8_-_102217877 NM_001042511	82224	-	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	82302	-	NM_003406|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##M86400|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135699|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##BC035233|ZNF706|51123|zinc finger protein 706##BC015925|ZNF706|51123|zinc finger protein 706##AF125099|ZNF706|51123|zinc finger protein 706##AF275802|ZNF706|51123|zinc finger protein 706##AF275809|ZNF706|51123|zinc finger protein 706##AK290477|ZNF706|51123|zinc finger protein 706##BC068524|ZNF706|51123|zinc finger protein 706##NM_001042511|ZNF706|51123|zinc finger protein 706##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706	0.99748	CTCF.p2:7:0.997
chrX	101749637	101749779	reg1017096.p1	8.897	+	BC015020 AJ277526 AK308255 NM_001099686 NM_022053	-54820	-	NM_001099686 NM_022053 AK308255 AJ277526 BC015020	-247575	+	NM_001159560 BC092450 AY833564 BC042818 BC106955 NM_001012978	-338835	-	AF086495 BC000183 AK311771 D82345 NM_021992	21961	-	AK096692 NM_001168479 NM_001168480 NM_001168485 TSC_hg19_v1_chrX_+_101854110 BC064983 NM_001199818	104477	+	NM_001168478 NM_001168482 NM_022838 TSC_hg19_v1_chrX_+_101854450 CR749476 BC022066 BC047679 BC050678	104738	+	BC015020|NXF2|56001|nuclear RNA export factor 2##AJ277526|NXF2|56001|nuclear RNA export factor 2##AK308255|NXF2B|728343|nuclear RNA export factor 2B##NM_001099686|NXF2B|728343|nuclear RNA export factor 2B##NM_022053|NXF2|56001|nuclear RNA export factor 2##NM_001099686|NXF2B|728343|nuclear RNA export factor 2B##NM_022053|NXF2|56001|nuclear RNA export factor 2##AK308255|NXF2B|728343|nuclear RNA export factor 2B##AJ277526|NXF2|56001|nuclear RNA export factor 2##BC015020|NXF2|56001|nuclear RNA export factor 2##NM_001159560|BEX5|340542|brain expressed, X-linked 5##BC092450|BEX5|340542|brain expressed, X-linked 5##AY833564|BEX5|340542|brain expressed, X-linked 5##BC042818|BEX5|340542|brain expressed, X-linked 5##BC106955|BEX5|340542|brain expressed, X-linked 5##NM_001012978|BEX5|340542|brain expressed, X-linked 5##AF086495|TMSB15A|11013|thymosin beta 15a##BC000183|TMSB15A|11013|thymosin beta 15a##AK311771|TMSB15B|286527|thymosin beta 15B##D82345|TMSB15A|11013|thymosin beta 15a##NM_021992|TMSB15A|11013|thymosin beta 15a##AK096692|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001168479|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001168480|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001168485|ARMCX5|64860|armadillo repeat containing, X-linked 5##BC064983|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001199818|ARMCX5-GPRASP2|100528062|ARMCX5-GPRASP2 readthrough##NM_001168478|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001168482|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_022838|ARMCX5|64860|armadillo repeat containing, X-linked 5##CR749476|ARMCX5|64860|armadillo repeat containing, X-linked 5##BC022066|ARMCX5|64860|armadillo repeat containing, X-linked 5##BC047679|ARMCX5|64860|armadillo repeat containing, X-linked 5##BC050678|ARMCX5|64860|armadillo repeat containing, X-linked 5	0.707437	CTCF.p2:-16:0.707
chr1	226521209	226521357	reg1016678.p1	8.895	+	TSC_hg19_v1_chr1_-_226497442 AY166859 BC065302 AY166858	-23791	-	BC045625 NM_173083	-24086	-	TSC_hg19_v1_chr1_-_226496839 AY786184 BC043444 BX537869 AK126177 AF190323 AF190324 AK308823	-24387	-	TSC_hg19_v1_chr1_-_226595655 DQ891636 DQ894826 BC021045	74323	-	TSC_hg19_v1_chr1_-_226595717 AK312339 J03473	74422	-	TSC_hg19_v1_chr1_-_226595759 M18112 BC018620 AK225654	74472	-	AY166859|LIN9|286826|lin-9 homolog (C. elegans)##BC065302|LIN9|286826|lin-9 homolog (C. elegans)##AY166858|LIN9|286826|lin-9 homolog (C. elegans)##BC045625|LIN9|286826|lin-9 homolog (C. elegans)##NM_173083|LIN9|286826|lin-9 homolog (C. elegans)##AY786184|LIN9|286826|lin-9 homolog (C. elegans)##BC043444|LIN9|286826|lin-9 homolog (C. elegans)##BX537869|LIN9|286826|lin-9 homolog (C. elegans)##AK126177|LIN9|286826|lin-9 homolog (C. elegans)##AF190323|LIN9|286826|lin-9 homolog (C. elegans)##AF190324|LIN9|286826|lin-9 homolog (C. elegans)##AK308823|LIN9|286826|lin-9 homolog (C. elegans)##DQ891636|PARP1|142|poly (ADP-ribose) polymerase 1##DQ894826|PARP1|142|poly (ADP-ribose) polymerase 1##BC021045|PARP1|142|poly (ADP-ribose) polymerase 1##AK312339|PARP1|142|poly (ADP-ribose) polymerase 1##J03473|PARP1|142|poly (ADP-ribose) polymerase 1##M18112|PARP1|142|poly (ADP-ribose) polymerase 1##BC018620|PARP1|142|poly (ADP-ribose) polymerase 1##AK225654|PARP1|142|poly (ADP-ribose) polymerase 1	0.344109	CTCF.p2:23:0.344
chr12	45342671	45342769	reg1013890.p2	8.895	+	AK295125 NM_001145110	-35010	-	AK299733 NM_001145107	-72088	-	TSC_hg19_v1_chr12_-_45270158 NM_001145108 NM_006159	-72519	-	AK131230 NM_001004329 TSC_hg19_v1_chr12_-_45444883	102162	-	TSC_hg19_v1_chr12_+_45609769 AK126409 NM_001025356 NM_001142679 NM_001204803 AK310641	267064	+	TSC_hg19_v1_chr12_+_45609845 AK303996	267129	+	AK295125|NELL2|4753|NEL-like 2 (chicken)##NM_001145110|NELL2|4753|NEL-like 2 (chicken)##AK299733|NELL2|4753|NEL-like 2 (chicken)##NM_001145107|NELL2|4753|NEL-like 2 (chicken)##NM_001145108|NELL2|4753|NEL-like 2 (chicken)##NM_006159|NELL2|4753|NEL-like 2 (chicken)##AK131230|DBX2|440097|developing brain homeobox 2##NM_001004329|DBX2|440097|developing brain homeobox 2##AK126409|ANO6|196527|anoctamin 6##NM_001025356|ANO6|196527|anoctamin 6##NM_001142679|ANO6|196527|anoctamin 6##NM_001204803|ANO6|196527|anoctamin 6##AK310641|ANO6|196527|anoctamin 6##AK303996|ANO6|196527|anoctamin 6	1.436645	CTCF.p2:4:0.999	CTCF.p2:-31:0.438
chr18	74515829	74515940	reg1014942.p1	8.895	+	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	-308729	-	BC108287 TSC_hg19_v1_chr18_-_74092260	-423634	-	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-1376262	-	TSC_hg19_v1_chr18_-_74534239 BC032908	18355	-	TSC_hg19_v1_chr18_+_74534512 BX648028	18626	+	AF085243 AF085244 NM_007345	20231	+	D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC108287|ZNF516|9658|zinc finger protein 516##BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##BC032908|LOC100131655|100131655|uncharacterized LOC100131655##BX648028|ZNF236|7776|zinc finger protein 236##AF085243|ZNF236|7776|zinc finger protein 236##AF085244|ZNF236|7776|zinc finger protein 236##NM_007345|ZNF236|7776|zinc finger protein 236	0.947167	CTCF.p2:6:0.947
chr19	2663969	2664077	reg1013243.p1	8.895	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-187785	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-207063	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-207087	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	38672	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	38719	-	AK124445 TSC_hg19_v1_chr19_-_2717420	53326	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.74105	CTCF.p2:-28:0.741
chr20	20574382	20574488	reg1014204.p1	8.894	+	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	-225681	+	NM_001167816 AL117439	-537115	+	BC144222 AF255443 AF318303 AF318304 AF318305 NM_016652	-537748	-	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	118793	-	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	532229	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	532292	+	M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1##BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1	1.498495	CTCF.p2:9:0.948	CTCF.p2:106:0.550
chr5	81134499	81134603	reg1014089.p1	8.894	+	TSC_hg19_v1_chr5_-_81046990 NM_012446	-87443	-	TSC_hg19_v1_chr5_-_81046929 AB528651 CU677799 DQ891620 DQ894812 EU176592 EU831646 EU831730 AK293544 AK074537 AK294864 AK297494 AF161465 AF077048 AK299858 AK312337 CR936787 AL080076 BC017020	-87652	-	BC075011 BC075010 AK122960 AB078619 BC089437 NM_130767 TSC_hg19_v1_chr5_-_80690052	-444549	-	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	133294	+	AF318326 TSC_hg19_v1_chr5_+_81267992	133439	+	TSC_hg19_v1_chr5_+_81268100 AL136912	133547	+	NM_012446|SSBP2|23635|single-stranded DNA binding protein 2##DQ891620|SSBP2|23635|single-stranded DNA binding protein 2##DQ894812|SSBP2|23635|single-stranded DNA binding protein 2##EU176592|SSBP2|23635|single-stranded DNA binding protein 2##EU831646|SSBP2|23635|single-stranded DNA binding protein 2##EU831730|SSBP2|23635|single-stranded DNA binding protein 2##AK293544|SSBP2|23635|single-stranded DNA binding protein 2##AK074537|SSBP2|23635|single-stranded DNA binding protein 2##AK294864|SSBP2|23635|single-stranded DNA binding protein 2##AK297494|SSBP2|23635|single-stranded DNA binding protein 2##AF161465|SSBP2|23635|single-stranded DNA binding protein 2##AF077048|SSBP2|23635|single-stranded DNA binding protein 2##AK299858|SSBP2|23635|single-stranded DNA binding protein 2##AK312337|SSBP2|23635|single-stranded DNA binding protein 2##CR936787|SSBP2|23635|single-stranded DNA binding protein 2##AL080076|SSBP2|23635|single-stranded DNA binding protein 2##BC017020|SSBP2|23635|single-stranded DNA binding protein 2##BC075011|ACOT12|134526|acyl-CoA thioesterase 12##BC075010|ACOT12|134526|acyl-CoA thioesterase 12##AK122960|ACOT12|134526|acyl-CoA thioesterase 12##AB078619|ACOT12|134526|acyl-CoA thioesterase 12##BC089437|ACOT12|134526|acyl-CoA thioesterase 12##NM_130767|ACOT12|134526|acyl-CoA thioesterase 12##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AF318326|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AL136912|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)	0.13158	
chr6	112484651	112484773	reg1017255.p1	8.894	+	NM_001033564 TSC_hg19_v1_chr6_+_112408818 BC044912 AL049461	-75931	+	AF201334 CU689114 CU692994 DQ891503 DQ894695 BC025405 TSC_hg19_v1_chr6_-_112408705 BC031101 AK026242 NM_016262	-76007	-	BC012028 NM_003880 BC035250 NM_198239 BC105940 BC105941 AY358349 AF100781 AY358350 AB075040	-109295	+	TSC_hg19_v1_chr6_-_112575345 AB384677 BT006690 CR407622	90636	-	S78569 TSC_hg19_v1_chr6_-_112575748 BC004241 AK304401 BC026237	91017	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	91093	-	NM_001033564|C6orf225|619208|chromosome 6 open reading frame 225##BC044912|C6orf225|619208|chromosome 6 open reading frame 225##AL049461|C6orf225|619208|chromosome 6 open reading frame 225##AF201334|TUBE1|51175|tubulin, epsilon 1##DQ891503|TUBE1|51175|tubulin, epsilon 1##DQ894695|TUBE1|51175|tubulin, epsilon 1##BC025405|TUBE1|51175|tubulin, epsilon 1##BC031101|TUBE1|51175|tubulin, epsilon 1##AK026242|TUBE1|51175|tubulin, epsilon 1##NM_016262|TUBE1|51175|tubulin, epsilon 1##BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3##AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3##BT006690|LAMA4|3910|laminin, alpha 4##CR407622|LAMA4|3910|laminin, alpha 4##S78569|LAMA4|3910|laminin, alpha 4##BC004241|LAMA4|3910|laminin, alpha 4##AK304401|LAMA4|3910|laminin, alpha 4##BC026237|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4	0.986951	CTCF.p2:9:0.987
chr7	66302114	66302241	reg1015306.p1	8.894	+	TSC_hg19_v1_chr7_+_66205719 AJ250042 AK223329 AK290678	-96447	+	TSC_hg19_v1_chr7_+_66205692 BC015330	-96483	+	NM_014504 TSC_hg19_v1_chr7_+_66205645	-96533	+	TSC_hg19_v1_chr7_+_66386215 AK222774 NM_017994 BC012562 AK000961 BC008675	83999	+	TSC_hg19_v1_chr7_+_66386228 BC041764	84054	+	TSC_hg19_v1_chr7_+_66386238 BC010519	84094	+	AJ250042|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK223329|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK290678|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##BC015330|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##NM_014504|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK222774|C7orf42|55069|chromosome 7 open reading frame 42##NM_017994|C7orf42|55069|chromosome 7 open reading frame 42##BC012562|C7orf42|55069|chromosome 7 open reading frame 42##AK000961|C7orf42|55069|chromosome 7 open reading frame 42##BC008675|C7orf42|55069|chromosome 7 open reading frame 42##BC041764|C7orf42|55069|chromosome 7 open reading frame 42##BC010519|C7orf42|55069|chromosome 7 open reading frame 42	1.0238	CTCF.p2:-12:0.981
chrX	99634510	99634622	reg1014742.p1	8.894	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	-3495596	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	-3694612	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	-3694815	+	EF676096 NM_001105243 NM_001184880 NM_020766 TSC_hg19_v1_chrX_-_99665272	30707	-	NM_022144 AF191770 BC034030 AF291656 AF234259 AY358706 AB055421 AB590911 CU689814	205335	+	BT006977 CR457115 AB527646 DQ890668 DQ893849 TSC_hg19_v1_chrX_-_99891804 AF053453 AK299176 AF133426 AK309581 AY358825 AB097016 AF043906 U84895 BC012389 NM_003270 AK075072 AB209876 AK315773 AK300852	257202	-	NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##EF676096|PCDH19|57526|protocadherin 19##NM_001105243|PCDH19|57526|protocadherin 19##NM_001184880|PCDH19|57526|protocadherin 19##NM_020766|PCDH19|57526|protocadherin 19##NM_022144|TNMD|64102|tenomodulin##AF191770|TNMD|64102|tenomodulin##BC034030|TNMD|64102|tenomodulin##AF291656|TNMD|64102|tenomodulin##AF234259|TNMD|64102|tenomodulin##AY358706|TNMD|64102|tenomodulin##AB055421|TNMD|64102|tenomodulin##BT006977|TSPAN6|7105|tetraspanin 6##CR457115|TSPAN6|7105|tetraspanin 6##DQ890668|TSPAN6|7105|tetraspanin 6##DQ893849|TSPAN6|7105|tetraspanin 6##AF053453|TSPAN6|7105|tetraspanin 6##AK299176|TSPAN6|7105|tetraspanin 6##AF133426|TSPAN6|7105|tetraspanin 6##AK309581|TSPAN6|7105|tetraspanin 6##AY358825|TSPAN6|7105|tetraspanin 6##AB097016|TSPAN6|7105|tetraspanin 6##AF043906|TSPAN6|7105|tetraspanin 6##U84895|TSPAN6|7105|tetraspanin 6##BC012389|TSPAN6|7105|tetraspanin 6##NM_003270|TSPAN6|7105|tetraspanin 6##AK075072|TSPAN6|7105|tetraspanin 6##AB209876|TSPAN6|7105|tetraspanin 6##AK315773|TSPAN6|7105|tetraspanin 6##AK300852|TSPAN6|7105|tetraspanin 6	0.06757	
chr13	82904763	82904888	reg1013385.p1	8.892	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-1989761	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-1991783	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-2849270	+	TSC_hg19_v1_chr13_-_84456424 BC051738	1551600	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	1551675	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	3468614	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.728556	CTCF.p2:10:0.729
chr2	60934934	60935075	reg1014606.p1	8.892	+	AF080216 TSC_hg19_v1_chr2_-_60780784	-154226	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	-154482	-	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2466522	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	48480	+	TSC_hg19_v1_chr2_+_61108702 AK303926	173701	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	173733	+	AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)	0.790223	CTCF.p2:-9:0.790
chr3	51716218	51716345	reg1014964.p2	8.892	+	NM_001129884 NM_001243727 NM_015926 TSC_hg19_v1_chr3_+_51705247 AK023997 AK222938 AK222949 BC008742 NM_001243725 NM_001243726 AY358972 BC001592	-11015	+	AK122683 NM_015106	-140686	+	TSC_hg19_v1_chr3_-_51534015 AB018343 BC110371 NM_001171904 NM_014703	-182275	-	NM_000839 NM_001130063 AK315816 AK289984 AK313056 BC041447	24811	+	NM_001143833	96921	-	BC146874 BC146889 BC171811 BC171818 NM_001085479 NM_001207023	144617	+	NM_001129884|TEX264|51368|testis expressed 264##NM_001243727|TEX264|51368|testis expressed 264##NM_015926|TEX264|51368|testis expressed 264##AK023997|TEX264|51368|testis expressed 264##AK222938|TEX264|51368|testis expressed 264##AK222949|TEX264|51368|testis expressed 264##BC008742|TEX264|51368|testis expressed 264##NM_001243725|TEX264|51368|testis expressed 264##NM_001243726|TEX264|51368|testis expressed 264##AY358972|TEX264|51368|testis expressed 264##BC001592|TEX264|51368|testis expressed 264##AK122683|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)##NM_015106|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)##AB018343|VPRBP|9730|Vpr (HIV-1) binding protein##BC110371|VPRBP|9730|Vpr (HIV-1) binding protein##NM_001171904|VPRBP|9730|Vpr (HIV-1) binding protein##NM_014703|VPRBP|9730|Vpr (HIV-1) binding protein##NM_000839|GRM2|2912|glutamate receptor, metabotropic 2##NM_001130063|GRM2|2912|glutamate receptor, metabotropic 2##AK315816|GRM2|2912|glutamate receptor, metabotropic 2##AK289984|GRM2|2912|glutamate receptor, metabotropic 2##AK313056|GRM2|2912|glutamate receptor, metabotropic 2##BC041447|GRM2|2912|glutamate receptor, metabotropic 2##NM_001143833|IQCF6|440956|IQ motif containing F6##BC146874|IQCF3|401067|IQ motif containing F3##BC146889|IQCF3|401067|IQ motif containing F3##BC171811|IQCF3|401067|IQ motif containing F3##BC171818|IQCF3|401067|IQ motif containing F3##NM_001085479|IQCF3|401067|IQ motif containing F3##NM_001207023|IQCF3|401067|IQ motif containing F3	0.199319	
chr2	20215381	20215524	reg1016583.p1	8.891	+	TSC_hg19_v1_chr2_-_20212456 AK290856 NM_002381	-2987	-	AJ224741 BC139907 TSC_hg19_v1_chr2_-_20212430 EU541440	-3032	-	AB385451 AK122917 AK315094 BC036659 NM_001006657 NM_020779 AB037757 TSC_hg19_v1_chr2_-_20189911	-25609	-	CR456758 TSC_hg19_v1_chr2_-_20251382 BC000421 AK304433 BC093075	35886	-	TSC_hg19_v1_chr2_-_20251415 AY359028 D14696 BC003158 AK129875	35975	-	NM_014713	36336	-	AK290856|MATN3|4148|matrilin 3##NM_002381|MATN3|4148|matrilin 3##AJ224741|MATN3|4148|matrilin 3##BC139907|MATN3|4148|matrilin 3##EU541440|MATN3|4148|matrilin 3##AK122917|WDR35|57539|WD repeat domain 35##AK315094|WDR35|57539|WD repeat domain 35##BC036659|WDR35|57539|WD repeat domain 35##NM_001006657|WDR35|57539|WD repeat domain 35##NM_020779|WDR35|57539|WD repeat domain 35##AB037757|WDR35|57539|WD repeat domain 35##CR456758|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC000421|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK304433|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC093075|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AY359028|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##D14696|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC003158|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK129875|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##NM_014713|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha	0.896716	CTCF.p2:-14:0.897
chr2	240821791	240821918	reg1013538.p1	8.891	+	TSC_hg19_v1_chr2_-_240323341 AK308791	-498506	-	TSC_hg19_v1_chr2_-_240322695 BC039904	-499156	-	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	-499206	-	AF453834 TSC_hg19_v1_chr2_-_240964750 CU678462 DQ891011 DQ894191 BC031332 AF087661 AB209440 AK290778 BC003417 AF087854	142907	-	TSC_hg19_v1_chr2_-_240964807 NM_004544	142958	-	NM_001005853 BC137561 BC137562	148021	-	AK308791|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##AF453834|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ891011|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ894191|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC031332|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087661|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AB209440|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AK290778|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC003417|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087854|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_004544|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_001005853|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137561|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137562|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2	0.982647	CTCF.p2:11:0.983
chr3	195906846	195906978	reg1010701.p2	8.891	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-97896	-	TSC_hg19_v1_chr3_-_195808984 M11507	-97929	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-97951	-	BC034801 BC022078 NM_001039617 AK122907	31369	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	36482	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	107623	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.046421	
chr15	48205200	48205350	reg1017141.p1	8.890	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	-194590	+	TSC_hg19_v1_chr15_+_48009541 AK290032	-195687	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	-728888	+	AF348468 NM_205850 BC110836 BC113628 BC113630 BC143950 DQ665306 DQ665307 HQ258279	207929	+	AF190159 TSC_hg19_v1_chr15_-_48470320 AF106685	265054	-	TSC_hg19_v1_chr15_-_48470503 AB037762 BC152420 BC152451 BC068523 AK023133 NM_016132	265242	-	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF348468|SLC24A5|283652|solute carrier family 24, member 5##NM_205850|SLC24A5|283652|solute carrier family 24, member 5##BC113628|SLC24A5|283652|solute carrier family 24, member 5##BC113630|SLC24A5|283652|solute carrier family 24, member 5##BC143950|SLC24A5|283652|solute carrier family 24, member 5##DQ665306|SLC24A5|283652|solute carrier family 24, member 5##DQ665307|SLC24A5|283652|solute carrier family 24, member 5##HQ258279|SLC24A5|283652|solute carrier family 24, member 5##AF190159|MYEF2|50804|myelin expression factor 2##AF106685|MYEF2|50804|myelin expression factor 2##AB037762|MYEF2|50804|myelin expression factor 2##BC152420|MYEF2|50804|myelin expression factor 2##BC152451|MYEF2|50804|myelin expression factor 2##BC068523|MYEF2|50804|myelin expression factor 2##AK023133|MYEF2|50804|myelin expression factor 2##NM_016132|MYEF2|50804|myelin expression factor 2	0.012576	
chr4	17810220	17810344	reg1013944.p2	8.888	+	BC050697 TSC_hg19_v1_chr4_-_17806917	-3414	-	AK308144 NM_015688	-27148	-	TSC_hg19_v1_chr4_+_17616263 AF318059 AK313928 AF358829 NM_025205 BC011936 AF317680 DQ893391 DQ896713 AF317679 AF317678	-194016	+	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	1991	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	2329	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	213184	-	BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16##AK308144|FAM184B|27146|family with sequence similarity 184, member B##NM_015688|FAM184B|27146|family with sequence similarity 184, member B##AF318059|MED28|80306|mediator complex subunit 28##AK313928|MED28|80306|mediator complex subunit 28##AF358829|MED28|80306|mediator complex subunit 28##NM_025205|MED28|80306|mediator complex subunit 28##BC011936|MED28|80306|mediator complex subunit 28##AF317680|MED28|80306|mediator complex subunit 28##DQ893391|MED28|80306|mediator complex subunit 28##DQ896713|MED28|80306|mediator complex subunit 28##AF317679|MED28|80306|mediator complex subunit 28##AF317678|MED28|80306|mediator complex subunit 28##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like	0.939249	CTCF.p2:-4:0.939
chr17	12084117	12084246	reg1016552.p1	8.887	+	TSC_hg19_v1_chr17_+_11924150 BC036032 NM_003010 BC060764 AK131544 AK313053 U17743 AK294923 L36870 BC050386 AB590846 BT019676 CR536564	-160000	+	AK092656 AX747657 NM_144680 TSC_hg19_v1_chr17_-_11900782 AY491053 AK127908	-183428	-	NM_004662 X99947	-297961	+	NM_001146312 NM_153604 TSC_hg19_v1_chr17_+_12569210 AY764180	485028	+	AK128608 TSC_hg19_v1_chr17_+_12569334 AK292885	485140	+	TSC_hg19_v1_chr17_+_12569389 BC126307 BC143391 AF532596	485253	+	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4##NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4##U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4##L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4##CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK092656|ZNF18|7566|zinc finger protein 18##NM_144680|ZNF18|7566|zinc finger protein 18##AY491053|ZNF18|7566|zinc finger protein 18##AK127908|ZNF18|7566|zinc finger protein 18##NM_004662|DNAH9|1770|dynein, axonemal, heavy chain 9##X99947|DNAH9|1770|dynein, axonemal, heavy chain 9##NM_001146312|MYOCD|93649|myocardin##NM_153604|MYOCD|93649|myocardin##AY764180|MYOCD|93649|myocardin##AK128608|MYOCD|93649|myocardin##AK292885|MYOCD|93649|myocardin##BC126307|MYOCD|93649|myocardin##BC143391|MYOCD|93649|myocardin##AF532596|MYOCD|93649|myocardin	0.940962	CTCF.p2:0:0.941
chr22	21817106	21817233	reg1016864.p1	8.887	+	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	-45493	+	NM_001128635	-79130	+	NM_001128633	-79507	+	NM_001207052	4289	+	NM_001128635	88203	-	NM_001128633	88580	-	AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_001207052|TMEM191C|645426|transmembrane protein 191C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C	0.685857	CTCF.p2:3:0.686
chr5	145921950	145922073	reg1014878.p2	8.887	+	AB463658 AY351676 NM_194251 AK122627	-26298	-	TSC_hg19_v1_chr5_+_145826895 NM_001040006 NM_006706 AK304319 BC006109 BC014151 BC062351 AK126455 BC111727 AB209910 AB464301 AF017789	-95117	+	BC104923 BC112207 NM_002700 AB464668 EU446649 HQ258176	-203381	+	CU689232 DQ891785 DQ894969 TSC_hg19_v1_chr5_-_146257712	335663	-	AK314810 M64930 NM_004576 AK056192 NM_181675 AK289717 BX647887 NM_001127381	336288	-	BC031790 NM_181674 NM_181676	513633	-	AY351676|GPR151|134391|G protein-coupled receptor 151##NM_194251|GPR151|134391|G protein-coupled receptor 151##NM_001040006|TCERG1|10915|transcription elongation regulator 1##NM_006706|TCERG1|10915|transcription elongation regulator 1##AK304319|TCERG1|10915|transcription elongation regulator 1##BC006109|TCERG1|10915|transcription elongation regulator 1##BC014151|TCERG1|10915|transcription elongation regulator 1##BC062351|TCERG1|10915|transcription elongation regulator 1##AK126455|TCERG1|10915|transcription elongation regulator 1##BC111727|TCERG1|10915|transcription elongation regulator 1##AB209910|TCERG1|10915|transcription elongation regulator 1##AF017789|TCERG1|10915|transcription elongation regulator 1##BC104923|POU4F3|5459|POU class 4 homeobox 3##BC112207|POU4F3|5459|POU class 4 homeobox 3##NM_002700|POU4F3|5459|POU class 4 homeobox 3##EU446649|POU4F3|5459|POU class 4 homeobox 3##HQ258176|POU4F3|5459|POU class 4 homeobox 3##DQ891785|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##DQ894969|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK314810|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##M64930|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_004576|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK056192|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181675|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK289717|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BX647887|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_001127381|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	0.015657	
chr6_mcf_hap5	2542384	2542510	reg1017288.p1	8.886	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.998737	CTCF.p2:2:0.999
chr7	105128539	105128685	reg1016636.p1	8.885	+	TSC_hg19_v1_chr7_-_105029346 NM_182692	-99270	-	TSC_hg19_v1_chr7_-_105029265 AB489157	-99347	-	BC035214 TSC_hg19_v1_chr7_-_104909496 U88666 NM_182691	-219129	-	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	34049	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	44034	+	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	93323	-	NM_182692|SRPK2|6733|SRSF protein kinase 2##BC035214|SRPK2|6733|SRSF protein kinase 2##U88666|SRPK2|6733|SRSF protein kinase 2##NM_182691|SRPK2|6733|SRSF protein kinase 2##BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10	0.897911	CTCF.p2:11:0.898
chr7	117745004	117745125	reg1016089.p1	8.885	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-231521	-	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	-231583	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	-625026	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	79107	+	NM_019644 AK302407	119670	+	AK307139 AB028967 NM_012281	2168640	+	BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2	0.938801	CTCF.p2:13:0.939
chr1	177225457	177225583	reg1014831.p2	8.884	+	AB051534 AB161694 BC028036 NM_021165	-84939	+	AK296524 TSC_hg19_v1_chr1_+_177140093	-85442	+	TSC_hg19_v1_chr1_-_177134042 AK309094	-91445	-	AB063357 NM_033127 TSC_hg19_v1_chr1_-_177939202	713606	-	BC009106 TSC_hg19_v1_chr1_-_177939393	713850	-	TSC_hg19_v1_chr1_-_178007060 AK092831 BX538051 AB067515	781579	-	AB051534|FAM5B|57795|family with sequence similarity 5, member B##AB161694|FAM5B|57795|family with sequence similarity 5, member B##BC028036|FAM5B|57795|family with sequence similarity 5, member B##NM_021165|FAM5B|57795|family with sequence similarity 5, member B##AK296524|FAM5B|57795|family with sequence similarity 5, member B##AK309094|ASTN1|460|astrotactin 1##AB063357|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##NM_033127|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##BC009106|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AK092831|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##BX538051|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene	0.99981	CTCF.p2:-13:1.000
chr1	208825782	208825908	reg1014931.p1	8.884	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-408196	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-741288	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-741462	-	AK091113 AX746785 NM_001104548	776320	+	NM_020439 AK095713 AK289675 AF428261 BC032787	931215	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	998834	-	NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3	0.869982	CTCF.p2:-3:0.870
chr20	32319689	32319823	reg1015326.p1	8.884	+	TSC_hg19_v1_chr20_-_32308117 CR533471 CU674580 EU832287 EU832372 BC001147 AK023879 AF072864 AL136648 AK301532 AK316589 AK297018 NM_007238 NM_183397	-11742	-	TSC_hg19_v1_chr20_-_32274190 BC065188 S49592 M96577 BC050369 NM_005225	-45559	-	AB590894 TSC_hg19_v1_chr20_-_32274123 BC058902	-45646	-	BC132873 BC144188 BC157823 BC146811 BC094738 NM_032819 BC063492 BC040440 AB587355 HQ258664	40	+	TSC_hg19_v1_chr20_+_32399127 NM_176812	79330	+	TSC_hg19_v1_chr20_+_32399155 AB100261 BC033859 AY726594 AY329085	79464	+	CR533471|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##EU832287|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##EU832372|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##BC001147|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK023879|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AF072864|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AL136648|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK301532|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK316589|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK297018|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##NM_007238|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##NM_183397|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##S49592|E2F1|1869|E2F transcription factor 1##M96577|E2F1|1869|E2F transcription factor 1##BC050369|E2F1|1869|E2F transcription factor 1##NM_005225|E2F1|1869|E2F transcription factor 1##BC058902|E2F1|1869|E2F transcription factor 1##BC132873|ZNF341|84905|zinc finger protein 341##BC144188|ZNF341|84905|zinc finger protein 341##BC157823|ZNF341|84905|zinc finger protein 341##BC146811|ZNF341|84905|zinc finger protein 341##BC094738|ZNF341|84905|zinc finger protein 341##NM_032819|ZNF341|84905|zinc finger protein 341##BC063492|ZNF341|84905|zinc finger protein 341##BC040440|ZNF341|84905|zinc finger protein 341##HQ258664|ZNF341|84905|zinc finger protein 341##NM_176812|CHMP4B|128866|charged multivesicular body protein 4B##AB100261|CHMP4B|128866|charged multivesicular body protein 4B##BC033859|CHMP4B|128866|charged multivesicular body protein 4B##AY726594|CHMP4B|128866|charged multivesicular body protein 4B##AY329085|CHMP4B|128866|charged multivesicular body protein 4B	0.99493	CTCF.p2:-16:0.995
chr9	4117883	4117963	reg1011676.p1	8.884	+	TSC_hg19_v1_chr9_+_3526079 AK125504	-591835	+	TSC_hg19_v1_chr9_-_3525983 BC022191 NM_002919 NM_134428	-591919	-	TSC_hg19_v1_chr9_-_3525889 AK310956 AK289540	-592084	-	BC033899 NM_152629	34259	-	TSC_hg19_v1_chr9_-_4299574 DQ438882 DQ438887 DQ438892 DQ438899 DQ438902	181660	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	182040	-	BC022191|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_002919|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_134428|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK310956|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK289540|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##BC033899|GLIS3|169792|GLIS family zinc finger 3##NM_152629|GLIS3|169792|GLIS family zinc finger 3##DQ438882|GLIS3|169792|GLIS family zinc finger 3##DQ438887|GLIS3|169792|GLIS family zinc finger 3##DQ438892|GLIS3|169792|GLIS family zinc finger 3##DQ438899|GLIS3|169792|GLIS family zinc finger 3##DQ438902|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3	0.66018	CTCF.p2:13:0.660
chr17	39735944	39736070	reg1017015.p1	8.882	+	BC121170 NM_000226 S69510 Z29074	-7701	-	TSC_hg19_v1_chr17_-_39684642 NM_002276	-51368	-	CU679705 DQ892179 DQ895373 AB527586 Y00503 BC084574 BC002539 BC007628 BC010409 TSC_hg19_v1_chr17_-_39684561 AK313261 BC067744	-51477	-	BT007186 AB527765 DQ890733 DQ892997 DQ893905 BC042437 BC002690 BC019097 BC094830 AK309280 NM_000526	7108	-	S79867 DQ891307 DQ896818 AF061812 BC039169 AK290853 AK309296 AK309278 NM_005557	33001	-	AB528302 DQ891101 DQ894283 BC072018 BC072019 BC011901 X62571 BC000159 BC056421 AK304373 AK095342 NM_000422	44814	-	BC121170|KRT9|3857|keratin 9##NM_000226|KRT9|3857|keratin 9##S69510|KRT9|3857|keratin 9##Z29074|KRT9|3857|keratin 9##NM_002276|KRT19|3880|keratin 19##DQ892179|KRT19|3880|keratin 19##DQ895373|KRT19|3880|keratin 19##Y00503|KRT19|3880|keratin 19##BC084574|KRT19|3880|keratin 19##BC002539|KRT19|3880|keratin 19##BC007628|KRT19|3880|keratin 19##BC010409|KRT19|3880|keratin 19##AK313261|KRT19|3880|keratin 19##BC067744|KRT19|3880|keratin 19##BT007186|KRT14|3861|keratin 14##DQ890733|KRT14|3861|keratin 14##DQ892997|KRT14|3861|keratin 14##DQ893905|KRT14|3861|keratin 14##BC042437|KRT14|3861|keratin 14##BC002690|KRT14|3861|keratin 14##BC019097|KRT14|3861|keratin 14##BC094830|KRT14|3861|keratin 14##NM_000526|KRT14|3861|keratin 14##S79867|KRT16|3868|keratin 16##DQ891307|KRT16|3868|keratin 16##DQ896818|KRT16|3868|keratin 16##AF061812|KRT16|3868|keratin 16##BC039169|KRT16|3868|keratin 16##AK290853|KRT16|3868|keratin 16##NM_005557|KRT16|3868|keratin 16##DQ891101|KRT17|3872|keratin 17##DQ894283|KRT17|3872|keratin 17##BC072018|KRT17|3872|keratin 17##BC072019|KRT17|3872|keratin 17##BC011901|KRT17|3872|keratin 17##X62571|KRT17|3872|keratin 17##BC000159|KRT17|3872|keratin 17##BC056421|KRT17|3872|keratin 17##AK304373|KRT17|3872|keratin 17##AK095342|KRT17|3872|keratin 17##NM_000422|KRT17|3872|keratin 17	0.0	
chr17	77979706	77979841	reg1013623.p1	8.882	+	BC044939 TSC_hg19_v1_chr17_+_77893233	-86574	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	-166631	-	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-208866	-	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	29829	-	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	30675	+	TSC_hg19_v1_chr17_+_78075349 NM_000152 NM_001079803 NM_001079804	95553	+	AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40##NM_000152|GAA|2548|glucosidase, alpha; acid##NM_001079803|GAA|2548|glucosidase, alpha; acid##NM_001079804|GAA|2548|glucosidase, alpha; acid	0.859178	CTCF.p2:11:0.859
chr2	207911691	207911825	reg1016496.p1	8.882	+	BC112076 BC112078 NM_173077 AJ422118	-107458	+	AK021557 TSC_hg19_v1_chr2_+_207630326 AK001516 AF223470 AL833877	-281435	+	NM_001136193 NM_001136194 NM_014929	-281647	+	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	118898	-	BC012919 TSC_hg19_v1_chr2_-_208031680	119867	-	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	482885	+	BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##AK021557|FASTKD2|22868|FAST kinase domains 2##AK001516|FASTKD2|22868|FAST kinase domains 2##AF223470|FASTKD2|22868|FAST kinase domains 2##AL833877|FASTKD2|22868|FAST kinase domains 2##NM_001136193|FASTKD2|22868|FAST kinase domains 2##NM_001136194|FASTKD2|22868|FAST kinase domains 2##NM_014929|FASTKD2|22868|FAST kinase domains 2##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1	0.0	
chr8	72919573	72919722	reg1014258.p1	8.882	+	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-162939	-	AF060154 TSC_hg19_v1_chr8_-_72756646	-163019	-	TSC_hg19_v1_chr8_-_72756449 AF087036 AB463900 BT007169	-163208	-	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	68187	-	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	529996	+	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	1001465	+	AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##AF060154|MSC|9242|musculin##AF087036|MSC|9242|musculin##BT007169|MSC|9242|musculin##NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1	0.992179	CTCF.p2:17:0.992
chr9	12465023	12465182	reg1016821.p1	8.882	+	BC028038 NM_002839	-1852380	-	TSC_hg19_v1_chr9_+_8858136 AK094342	-3606969	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-3731183	-	NM_000550 X51420 BC052608	228323	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	309914	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	310679	+	BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##HQ257895|C9orf150|286343|chromosome 9 open reading frame 150	0.997953	CTCF.p2:4:0.998
chr9	96444567	96444691	reg1015460.p1	8.881	+	TSC_hg19_v1_chr9_+_96339042 NM_005392 BC064613 AB014562 BC152437 AL834263	-105706	+	BC007879 TSC_hg19_v1_chr9_+_96233575	-211132	+	AK056096 NM_198841	-228756	-	TSC_hg19_v1_chr9_-_96717589 AF213356 NM_021570	272953	-	TSC_hg19_v1_chr9_-_96717638 BC064363	273010	-	TSC_hg19_v1_chr9_+_96793094 AY171233 NM_177995 BC067120 NM_001253830 BC051654	348486	+	NM_005392|PHF2|5253|PHD finger protein 2##BC064613|PHF2|5253|PHD finger protein 2##AB014562|PHF2|5253|PHD finger protein 2##BC152437|PHF2|5253|PHD finger protein 2##AL834263|PHF2|5253|PHD finger protein 2##BC007879|FAM120A|23196|family with sequence similarity 120A##AK056096|FAM120AOS|158293|family with sequence similarity 120A opposite strand##NM_198841|FAM120AOS|158293|family with sequence similarity 120A opposite strand##AF213356|BARX1|56033|BARX homeobox 1##NM_021570|BARX1|56033|BARX homeobox 1##BC064363|BARX1|56033|BARX homeobox 1##AY171233|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_177995|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC067120|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253830|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC051654|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	0.924361	CTCF.p2:-16:0.924
chr7	18032037	18032143	reg1014192.p2	8.880	+	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	-51963	-	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	-52041	-	TSC_hg19_v1_chr7_+_17382906 BC021696	-649184	+	BC062797 BC005309 M57423 NM_175886	35375	-	TSC_hg19_v1_chr7_+_18126583 AK304298 NM_001204144	94501	+	AK097178 TSC_hg19_v1_chr7_+_18330071	297969	+	AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13##BC021696|AHR|196|aryl hydrocarbon receptor##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##AK304298|HDAC9|9734|histone deacetylase 9##NM_001204144|HDAC9|9734|histone deacetylase 9##AK097178|HDAC9|9734|histone deacetylase 9	0.07361	
chr10	115323332	115323463	reg1016158.p1	8.878	+	NM_004132 D49742 S83182 BC031412 AK290832 AK303761 AK303759 AB590433 CU689160 DQ890820 DQ893975	-10569	+	AK303948 NM_001177660	-12808	+	TSC_hg19_v1_chr10_+_114710785 FJ010164 FJ010165 FJ010173	-612564	+	AM392642 AM393530 BC126407 BC143751 AL831980 AL832025 AL832330 BX640682 AY177620 AY177621 BX641052 BC005933 BC017866 BC058825 BC070130 AK056969 AY081943 NM_006175 NM_198060	100325	-	NM_033340 U37449 BX647973	115565	+	NM_001227 NM_033338 NM_033339 U67206	116029	+	NM_004132|HABP2|3026|hyaluronan binding protein 2##D49742|HABP2|3026|hyaluronan binding protein 2##S83182|HABP2|3026|hyaluronan binding protein 2##BC031412|HABP2|3026|hyaluronan binding protein 2##AK290832|HABP2|3026|hyaluronan binding protein 2##AK303761|HABP2|3026|hyaluronan binding protein 2##AK303759|HABP2|3026|hyaluronan binding protein 2##DQ890820|HABP2|3026|hyaluronan binding protein 2##DQ893975|HABP2|3026|hyaluronan binding protein 2##AK303948|HABP2|3026|hyaluronan binding protein 2##NM_001177660|HABP2|3026|hyaluronan binding protein 2##FJ010164|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010165|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010173|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AM392642|NRAP|4892|nebulin-related anchoring protein##AM393530|NRAP|4892|nebulin-related anchoring protein##BC126407|NRAP|4892|nebulin-related anchoring protein##BC143751|NRAP|4892|nebulin-related anchoring protein##AL831980|NRAP|4892|nebulin-related anchoring protein##AL832025|NRAP|4892|nebulin-related anchoring protein##AL832330|NRAP|4892|nebulin-related anchoring protein##BX640682|NRAP|4892|nebulin-related anchoring protein##AY177620|NRAP|4892|nebulin-related anchoring protein##AY177621|NRAP|4892|nebulin-related anchoring protein##BX641052|NRAP|4892|nebulin-related anchoring protein##BC005933|NRAP|4892|nebulin-related anchoring protein##BC017866|NRAP|4892|nebulin-related anchoring protein##BC058825|NRAP|4892|nebulin-related anchoring protein##BC070130|NRAP|4892|nebulin-related anchoring protein##AK056969|NRAP|4892|nebulin-related anchoring protein##AY081943|NRAP|4892|nebulin-related anchoring protein##NM_006175|NRAP|4892|nebulin-related anchoring protein##NM_198060|NRAP|4892|nebulin-related anchoring protein##NM_033340|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U37449|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##BX647973|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##NM_001227|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##NM_033338|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##NM_033339|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U67206|CASP7|840|caspase 7, apoptosis-related cysteine peptidase	0.997595	CTCF.p2:4:0.998
chr15	66579899	66580040	reg1016610.p1	8.878	+	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	-33892	-	TSC_hg19_v1_chr15_-_66321664 AK054827	-258276	-	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	-418122	+	NM_133375 AK295392 BC022089	5676	+	TSC_hg19_v1_chr15_+_66585931 NM_001143688 AK095407	5930	+	AK000523 TSC_hg19_v1_chr15_-_66649024 AK299233 BC000870 NM_017858	69054	-	BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK000523|TIPIN|54962|TIMELESS interacting protein##AK299233|TIPIN|54962|TIMELESS interacting protein##BC000870|TIPIN|54962|TIMELESS interacting protein##NM_017858|TIPIN|54962|TIMELESS interacting protein	0.654019	CTCF.p2:4:0.654
chr11	84491878	84491988	reg1014842.p2	8.877	+	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	-463552	-	AK294375 AK126776 AK295624 NM_001142700	-507657	-	AK299778 CR933674 NM_001142702	-1098482	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	142299	-	U32376 AB209252 AK295094 NM_001364	142517	-	CR749820 NM_001142699	846380	-	AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)##U32376|DLG2|1740|discs, large homolog 2 (Drosophila)##AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)##CR749820|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142699|DLG2|1740|discs, large homolog 2 (Drosophila)	0.881596	CTCF.p2:1:0.882
chr19	41415048	41415147	reg1011521.p1	8.877	+	NM_000764 NM_030589	-26441	-	X13929 X13897 AF182275 M33318 X13930 BC096253 BC096254 BC096255 BC096256 AK309594 TSC_hg19_v1_chr19_-_41356353 AK307740 AK312964 NM_000762	-58823	-	NM_053046 BC036051 AK098182	-109706	+	AK307933 AK310944 TSC_hg19_v1_chr19_+_41430151 BC041174 M29873 DQ198366 DQ198367	15053	+	TSC_hg19_v1_chr19_+_41497188 BC067430 BC067431 NM_000767 M29874 AF182277	82098	+	X13494 TSC_hg19_v1_chr19_+_41497329	82210	+	NM_000764|CYP2A7|1549|cytochrome P450, family 2, subfamily A, polypeptide 7##NM_030589|CYP2A7|1549|cytochrome P450, family 2, subfamily A, polypeptide 7##X13929|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##X13897|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AF182275|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##M33318|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096253|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096254|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096255|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096256|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK309594|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK307740|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK312964|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##NM_000762|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##NM_053046|EGLN2|112398|egl nine homolog 2 (C. elegans)##BC036051|EGLN2|112398|egl nine homolog 2 (C. elegans)##AK098182|EGLN2|112398|egl nine homolog 2 (C. elegans)##AK307933|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##AK310944|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##BC041174|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##M29873|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##DQ198366|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##DQ198367|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##BC067430|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##BC067431|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##NM_000767|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##M29874|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##AF182277|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##X13494|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6	0.025456	
chr15	51579204	51579329	reg1013745.p2	8.876	+	AY517501 NM_207381	-181794	-	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	-192416	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	-378339	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	51498	-	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	54528	+	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	335707	-	AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2	0.231518	
chr2	64088501	64088606	reg1013657.p1	8.876	+	BX647825 NM_006759 AK314263 TSC_hg19_v1_chr2_+_64069029 BC047004 BC000173	-19527	+	TSC_hg19_v1_chr2_+_64068125 NM_001001521 BC002954 U27460	-20350	+	TSC_hg19_v1_chr2_+_63816146 NM_001199111 NM_001199112 AK295931 AK300719	-272253	+	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	157709	-	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	157952	-	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	282971	-	BX647825|UGP2|7360|UDP-glucose pyrophosphorylase 2##NM_006759|UGP2|7360|UDP-glucose pyrophosphorylase 2##AK314263|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC047004|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC000173|UGP2|7360|UDP-glucose pyrophosphorylase 2##NM_001001521|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC002954|UGP2|7360|UDP-glucose pyrophosphorylase 2##U27460|UGP2|7360|UDP-glucose pyrophosphorylase 2##NM_001199111|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##NM_001199112|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##AK295931|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##AK300719|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)	0.988809	CTCF.p2:15:0.989
chr9	134353870	134354014	reg1013918.p1	8.876	+	TSC_hg19_v1_chr9_+_134348954 BX647528	-4919	+	CU678266 TSC_hg19_v1_chr9_+_134305548	-48402	+	NM_013318 TSC_hg19_v1_chr9_+_134305488	-48460	+	TSC_hg19_v1_chr9_+_134378304 AK295561 NM_001077365 NM_001077366 NM_001136113 NM_001136114 NM_007171 AK074888 AK301486 AF095136	24354	+	TSC_hg19_v1_chr9_+_134378330 AK074874 AK299646 AK303254 AK307876 AK295458	24386	+	AK300393 TSC_hg19_v1_chr9_+_134378334	24392	+	BX647528|PRRC2B|84726|proline-rich coiled-coil 2B##NM_013318|PRRC2B|84726|proline-rich coiled-coil 2B##AK295561|POMT1|10585|protein-O-mannosyltransferase 1##NM_001077365|POMT1|10585|protein-O-mannosyltransferase 1##NM_001077366|POMT1|10585|protein-O-mannosyltransferase 1##NM_001136113|POMT1|10585|protein-O-mannosyltransferase 1##NM_001136114|POMT1|10585|protein-O-mannosyltransferase 1##NM_007171|POMT1|10585|protein-O-mannosyltransferase 1##AK074888|POMT1|10585|protein-O-mannosyltransferase 1##AK301486|POMT1|10585|protein-O-mannosyltransferase 1##AF095136|POMT1|10585|protein-O-mannosyltransferase 1##AK074874|POMT1|10585|protein-O-mannosyltransferase 1##AK299646|POMT1|10585|protein-O-mannosyltransferase 1##AK303254|POMT1|10585|protein-O-mannosyltransferase 1##AK307876|POMT1|10585|protein-O-mannosyltransferase 1##AK295458|POMT1|10585|protein-O-mannosyltransferase 1##AK300393|POMT1|10585|protein-O-mannosyltransferase 1	0.766727	CTCF.p2:23:0.767
chr10	34927512	34927622	reg1009561.p3	8.875	+	TSC_hg19_v1_chr10_-_33623996 BX648025	-1303569	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1303753	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	-1304114	-	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	176584	-	AK310225 AK300491 NM_001198778 NM_001198779	435645	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	451705	-	BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2	0.999671	CTCF.p2:1:1.000
chr1	152843983	152844089	reg1015360.p1	8.875	+	DQ991251 NM_001128600	-28707	+	NM_178348	-44088	+	BC031811 NM_178349	-59590	+	AK312020 BC014593 NM_030663 BC016744 X89960	6772	+	AK300492 AK301649 NM_005547	36994	+	NM_173080 BC112170 BC112172 BC069445 BC069549	99097	+	DQ991251|LCE6A|448835|late cornified envelope 6A##NM_001128600|LCE6A|448835|late cornified envelope 6A##NM_178348|LCE1A|353131|late cornified envelope 1A##BC031811|LCE1B|353132|late cornified envelope 1B##NM_178349|LCE1B|353132|late cornified envelope 1B##AK312020|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##BC014593|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##NM_030663|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##BC016744|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##X89960|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##AK300492|IVL|3713|involucrin##NM_005547|IVL|3713|involucrin##NM_173080|SPRR4|163778|small proline-rich protein 4##BC112170|SPRR4|163778|small proline-rich protein 4##BC112172|SPRR4|163778|small proline-rich protein 4##BC069445|SPRR4|163778|small proline-rich protein 4##BC069549|SPRR4|163778|small proline-rich protein 4	0.987949	CTCF.p2:-7:0.988
chr13	21286876	21286994	reg1014662.p2	8.875	+	AY078238 BC036243 NM_138284 AF458062	-9423	+	TSC_hg19_v1_chr13_+_21183940 BC039413	-102958	+	TSC_hg19_v1_chr13_+_21141298 AK300769 AK310223 AK308281 AK303853 BC059357	-145629	+	TSC_hg19_v1_chr13_-_21295740 L23206	8876	-	DQ823637 BC018091 NM_174928 TSC_hg19_v1_chr13_-_21348079	61131	-	TSC_hg19_v1_chr13_-_21348081 AK055408 AK316604	61152	-	AY078238|IL17D|53342|interleukin 17D##BC036243|IL17D|53342|interleukin 17D##NM_138284|IL17D|53342|interleukin 17D##AF458062|IL17D|53342|interleukin 17D##AK300769|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK310223|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK308281|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK303853|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC059357|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##DQ823637|N6AMT2|221143|N-6 adenine-specific DNA methyltransferase 2 (putative)##BC018091|N6AMT2|221143|N-6 adenine-specific DNA methyltransferase 2 (putative)##NM_174928|N6AMT2|221143|N-6 adenine-specific DNA methyltransferase 2 (putative)##AK316604|N6AMT2|221143|N-6 adenine-specific DNA methyltransferase 2 (putative)	0.962902	CTCF.p2:-10:0.963
chr19	1813059	1813174	reg1012789.p1	8.875	+	AY302538 NM_001178002 TSC_hg19_v1_chr19_-_1812276 BC035162 NM_138813 AK125225 AK125969	-879	-	TSC_hg19_v1_chr19_+_1776120 AK074606	-36929	+	NM_001080488 TSC_hg19_v1_chr19_+_1753823	-59364	+	AB384122 TSC_hg19_v1_chr19_-_1848439 AB032964 BC016923	35285	-	TSC_hg19_v1_chr19_-_1848471 BC032244 NM_020695	35345	-	TSC_hg19_v1_chr19_-_1863441 AF327440	50344	-	AY302538|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001178002|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##BC035162|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_138813|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125225|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125969|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001080488|ONECUT3|390874|one cut homeobox 3##AB032964|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC016923|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC032244|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##NM_020695|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##AF327440|KLF16|83855|Kruppel-like factor 16	0.0	
chr9	69784684	69784796	reg1014504.p2	8.875	+	AL136793 NM_001098805	-402760	+	AF265442 BC069006 AK293173 NM_001085457	-522186	-	NM_001085476	-582537	-	NM_001126334	394074	-	NM_001099279 NM_199244	644990	-	CU688346 TSC_hg19_v1_chr9_-_70490092	705341	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.829185	CTCF.p2:12:0.829
chr1	157918481	157918586	reg1014194.p1	8.874	+	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	-106971	-	CU689698 AF329488 BC021274 AK315748 AK096690 BC033690 AF459634 AY043464 NM_001159397 NM_001159398 NM_052938	-128648	-	CU686705 AK301113 AY043465 AF459633 AY358130 AK303549 BC069185 NM_030764	-171641	-	AY302131 NM_018240	44529	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	44855	+	BC027926 NM_001766	231203	+	DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like##AF329488|FCRL1|115350|Fc receptor-like 1##BC021274|FCRL1|115350|Fc receptor-like 1##AK315748|FCRL1|115350|Fc receptor-like 1##AK096690|FCRL1|115350|Fc receptor-like 1##BC033690|FCRL1|115350|Fc receptor-like 1##AF459634|FCRL1|115350|Fc receptor-like 1##AY043464|FCRL1|115350|Fc receptor-like 1##NM_001159397|FCRL1|115350|Fc receptor-like 1##NM_001159398|FCRL1|115350|Fc receptor-like 1##NM_052938|FCRL1|115350|Fc receptor-like 1##AK301113|FCRL2|79368|Fc receptor-like 2##AY043465|FCRL2|79368|Fc receptor-like 2##AF459633|FCRL2|79368|Fc receptor-like 2##AY358130|FCRL2|79368|Fc receptor-like 2##AK303549|FCRL2|79368|Fc receptor-like 2##BC069185|FCRL2|79368|Fc receptor-like 2##NM_030764|FCRL2|79368|Fc receptor-like 2##AY302131|KIRREL|55243|kin of IRRE like (Drosophila)##NM_018240|KIRREL|55243|kin of IRRE like (Drosophila)##BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule	0.980374	CTCF.p2:2:0.980
chr2	214670973	214671134	reg1013978.p2	8.874	+	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	-521896	+	AK124960 NM_001242575	-522125	-	BC028936 NM_001079526	-654721	-	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	605407	+	AB590656 JF790283 JF790285 JF790287 TSC_hg19_v1_chr2_-_215674408 BC126426 BC126428 AX794378 JF790280 JF790281 JF790282 JF790284 U76638 AK314260 AK301843 JF790286 AK223409 NM_000465	1003306	-	AY033486 NM_015657	1225756	-	BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##JF790283|BARD1|580|BRCA1 associated RING domain 1##JF790285|BARD1|580|BRCA1 associated RING domain 1##JF790287|BARD1|580|BRCA1 associated RING domain 1##BC126426|BARD1|580|BRCA1 associated RING domain 1##BC126428|BARD1|580|BRCA1 associated RING domain 1##AX794378|BARD1|580|BRCA1 associated RING domain 1##JF790280|BARD1|580|BRCA1 associated RING domain 1##JF790281|BARD1|580|BRCA1 associated RING domain 1##JF790282|BARD1|580|BRCA1 associated RING domain 1##JF790284|BARD1|580|BRCA1 associated RING domain 1##U76638|BARD1|580|BRCA1 associated RING domain 1##AK314260|BARD1|580|BRCA1 associated RING domain 1##AK301843|BARD1|580|BRCA1 associated RING domain 1##JF790286|BARD1|580|BRCA1 associated RING domain 1##AK223409|BARD1|580|BRCA1 associated RING domain 1##NM_000465|BARD1|580|BRCA1 associated RING domain 1##AY033486|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_015657|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12	0.999487	CTCF.p2:-11:0.999
chr2	219844886	219844999	reg1013881.p2	8.874	+	TSC_hg19_v1_chr2_+_219824381 BC041771 NM_003936 U34051	-20533	+	BC052234 AK024363 NM_025216 BC040026	-99679	+	AY009401 NM_006522 AK075522 AB059570 DQ890770 BC004329 AB590154 BT007456	-120290	+	BC023511 NM_017521 Y08976	5383	-	AF166331 NM_005209 BC006285 NM_057093 NM_057094	13181	-	AK127189 AK302678 AK302688 BC031585 NM_152389 NM_194302 BC047637	61300	-	BC041771|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##NM_003936|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##U34051|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##BC052234|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AK024363|WNT10A|80326|wingless-type MMTV integration site family, member 10A##NM_025216|WNT10A|80326|wingless-type MMTV integration site family, member 10A##BC040026|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AY009401|WNT6|7475|wingless-type MMTV integration site family, member 6##NM_006522|WNT6|7475|wingless-type MMTV integration site family, member 6##AK075522|WNT6|7475|wingless-type MMTV integration site family, member 6##AB059570|WNT6|7475|wingless-type MMTV integration site family, member 6##DQ890770|WNT6|7475|wingless-type MMTV integration site family, member 6##BC004329|WNT6|7475|wingless-type MMTV integration site family, member 6##BT007456|WNT6|7475|wingless-type MMTV integration site family, member 6##BC023511|FEV|54738|FEV (ETS oncogene family)##NM_017521|FEV|54738|FEV (ETS oncogene family)##Y08976|FEV|54738|FEV (ETS oncogene family)##AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2##AK127189|CCDC108|255101|coiled-coil domain containing 108##AK302678|CCDC108|255101|coiled-coil domain containing 108##AK302688|CCDC108|255101|coiled-coil domain containing 108##BC031585|CCDC108|255101|coiled-coil domain containing 108##NM_152389|CCDC108|255101|coiled-coil domain containing 108##NM_194302|CCDC108|255101|coiled-coil domain containing 108##BC047637|CCDC108|255101|coiled-coil domain containing 108	0.996473	CTCF.p2:0:0.996
chrX	50434858	50435009	reg1015302.p1	8.874	+	TSC_hg19_v1_chrX_-_50386679 AY044234	-48256	-	TSC_hg19_v1_chrX_-_50213589 BC137319 BC137320 NM_001013742 AB183864	-221271	-	AJ314764 AJ314765 AJ314766 AJ416458 NM_033031 NM_033670	-407394	+	TSC_hg19_v1_chrX_-_50557118 AB033028 BC151240 NM_020717	122178	-	BC117264 BC117266 NM_005448 BC069155 HQ258214	218825	+	AF469196 NM_153183	640149	+	AY044234|SHROOM4|57477|shroom family member 4##BC137319|DGKK|139189|diacylglycerol kinase, kappa##BC137320|DGKK|139189|diacylglycerol kinase, kappa##NM_001013742|DGKK|139189|diacylglycerol kinase, kappa##AB183864|DGKK|139189|diacylglycerol kinase, kappa##AJ314764|CCNB3|85417|cyclin B3##AJ314765|CCNB3|85417|cyclin B3##AJ314766|CCNB3|85417|cyclin B3##AJ416458|CCNB3|85417|cyclin B3##NM_033031|CCNB3|85417|cyclin B3##NM_033670|CCNB3|85417|cyclin B3##AB033028|SHROOM4|57477|shroom family member 4##BC151240|SHROOM4|57477|shroom family member 4##NM_020717|SHROOM4|57477|shroom family member 4##BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10	0.999251	CTCF.p2:-3:0.999
chr2	182607681	182607825	reg1016382.p1	8.873	+	BC009046 TSC_hg19_v1_chr2_-_182545243 AB593068 AB593070 AB593071 AK313799 AB593069 D82347 HQ426678 JF290420 NM_002500	-62452	-	AJ697855 AJ697856 AY357073 AY690329 AY690330 AY690331 AY690332 AY690333 AJ640141 AJ697858 BC137498 BC137499 AK293844 NM_001030311 NM_001030312 NM_001030313 NM_001160277 NM_201548 TSC_hg19_v1_chr2_-_182521833 HQ426666 HQ426667 HQ426668 HQ426669 HQ426670	-85962	-	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	-285431	+	TSC_hg19_v1_chr2_+_182756494 NM_001130445 NM_006751 AK093143 AX747951 AB067514	148778	+	TSC_hg19_v1_chr2_+_182756689 BC052581 BC064499 BC028706 AK291745 BX647257 AB116937 AB385517 BX647967 AK304238 BX648888	149040	+	NM_001080545 AK129898 AF494535 BX647581 BC017943	242896	+	BC009046|NEUROD1|4760|neurogenic differentiation 1##AB593068|NEUROD1|4760|neurogenic differentiation 1##AB593070|NEUROD1|4760|neurogenic differentiation 1##AB593071|NEUROD1|4760|neurogenic differentiation 1##AK313799|NEUROD1|4760|neurogenic differentiation 1##AB593069|NEUROD1|4760|neurogenic differentiation 1##D82347|NEUROD1|4760|neurogenic differentiation 1##HQ426678|CERKL|375298|ceramide kinase-like##JF290420|CERKL|375298|ceramide kinase-like##NM_002500|NEUROD1|4760|neurogenic differentiation 1##AJ697855|CERKL|375298|ceramide kinase-like##AJ697856|CERKL|375298|ceramide kinase-like##AY357073|CERKL|375298|ceramide kinase-like##AY690329|CERKL|375298|ceramide kinase-like##AY690330|CERKL|375298|ceramide kinase-like##AY690331|CERKL|375298|ceramide kinase-like##AY690332|CERKL|375298|ceramide kinase-like##AY690333|CERKL|375298|ceramide kinase-like##AJ640141|CERKL|375298|ceramide kinase-like##AJ697858|CERKL|375298|ceramide kinase-like##BC137498|CERKL|375298|ceramide kinase-like##BC137499|CERKL|375298|ceramide kinase-like##AK293844|CERKL|375298|ceramide kinase-like##NM_001030311|CERKL|375298|ceramide kinase-like##NM_001030312|CERKL|375298|ceramide kinase-like##NM_001030313|CERKL|375298|ceramide kinase-like##NM_001160277|CERKL|375298|ceramide kinase-like##NM_201548|CERKL|375298|ceramide kinase-like##HQ426667|CERKL|375298|ceramide kinase-like##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##NM_001130445|SSFA2|6744|sperm specific antigen 2##NM_006751|SSFA2|6744|sperm specific antigen 2##AB067514|SSFA2|6744|sperm specific antigen 2##BC052581|SSFA2|6744|sperm specific antigen 2##BC064499|SSFA2|6744|sperm specific antigen 2##BC028706|SSFA2|6744|sperm specific antigen 2##AK291745|SSFA2|6744|sperm specific antigen 2##BX647257|SSFA2|6744|sperm specific antigen 2##AB116937|SSFA2|6744|sperm specific antigen 2##BX647967|SSFA2|6744|sperm specific antigen 2##AK304238|SSFA2|6744|sperm specific antigen 2##BX648888|SSFA2|6744|sperm specific antigen 2##NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C	0.288482	CTCF.p2:-5:0.288
chr1	155067005	155067119	reg1015481.p2	8.872	+	TSC_hg19_v1_chr1_+_155051392 BC017722 NM_004952 BC110406 U14187 AK296030 AK316248 L37360 DQ891668 DQ894854	-15722	+	TSC_hg19_v1_chr1_+_155036206 NM_005227 NM_182689 NM_182690 BC107483 AK301966 AJ006352 AJ006353 U14188 CR533569	-30812	+	TSC_hg19_v1_chr1_+_155023819 AK308172 AK295614 AK296925 AK297468 U41767 EU176173 AB590397 AY518542 BT009764 U46005	-43226	+	AK057845 TSC_hg19_v1_chr1_+_155099946	32879	+	AK313117 NM_004428 NM_182685 TSC_hg19_v1_chr1_+_155100351 AK289589 AK308965 AL833641 AK311677 BC032698 BC095432 M57730 CR457416 DQ890722 DQ893900	33316	+	TSC_hg19_v1_chr1_+_155108327 AK289551 NM_001122837 NM_001122839 NM_018845 AF126023 BC009621 AF126024 BC012378	41247	+	BC017722|EFNA3|1944|ephrin-A3##NM_004952|EFNA3|1944|ephrin-A3##BC110406|EFNA3|1944|ephrin-A3##U14187|EFNA3|1944|ephrin-A3##AK296030|EFNA3|1944|ephrin-A3##AK316248|EFNA3|1944|ephrin-A3##L37360|EFNA3|1944|ephrin-A3##DQ891668|EFNA3|1944|ephrin-A3##DQ894854|EFNA3|1944|ephrin-A3##NM_005227|EFNA4|1945|ephrin-A4##NM_182689|EFNA4|1945|ephrin-A4##NM_182690|EFNA4|1945|ephrin-A4##BC107483|EFNA4|1945|ephrin-A4##AJ006352|EFNA4|1945|ephrin-A4##AJ006353|EFNA4|1945|ephrin-A4##U14188|EFNA4|1945|ephrin-A4##CR533569|EFNA4|1945|ephrin-A4##AK308172|ADAM15|8751|ADAM metallopeptidase domain 15##AK295614|ADAM15|8751|ADAM metallopeptidase domain 15##AK296925|ADAM15|8751|ADAM metallopeptidase domain 15##AK297468|ADAM15|8751|ADAM metallopeptidase domain 15##U41767|ADAM15|8751|ADAM metallopeptidase domain 15##EU176173|ADAM15|8751|ADAM metallopeptidase domain 15##AY518542|ADAM15|8751|ADAM metallopeptidase domain 15##BT009764|ADAM15|8751|ADAM metallopeptidase domain 15##U46005|ADAM15|8751|ADAM metallopeptidase domain 15##AK057845|EFNA1|1942|ephrin-A1##AK313117|EFNA1|1942|ephrin-A1##NM_004428|EFNA1|1942|ephrin-A1##NM_182685|EFNA1|1942|ephrin-A1##AK289589|EFNA1|1942|ephrin-A1##AL833641|EFNA1|1942|ephrin-A1##BC032698|EFNA1|1942|ephrin-A1##BC095432|EFNA1|1942|ephrin-A1##M57730|EFNA1|1942|ephrin-A1##CR457416|EFNA1|1942|ephrin-A1##DQ890722|EFNA1|1942|ephrin-A1##DQ893900|EFNA1|1942|ephrin-A1##AK289551|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122837|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122839|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_018845|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126023|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC009621|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126024|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC012378|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	0.994849	CTCF.p2:-8:0.995
chr1	220983601	220983726	reg1015929.p1	8.872	+	NM_022746 TSC_hg19_v1_chr1_+_220960254 AK026043 AK225416 AK094105 AK290812 BC010619	-23500	+	TSC_hg19_v1_chr1_+_220921664 AL136931 BC011973 NM_017898 BC016859	-62019	+	NM_024709 TSC_hg19_v1_chr1_+_220863727 BC036067 AK091937 AK056749 AK056749 AK024208	-119961	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	69098	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	69251	+	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	69436	+	NM_022746|MARC1|64757|mitochondrial amidoxime reducing component 1##AK026043|MARC1|64757|mitochondrial amidoxime reducing component 1##AK225416|MARC1|64757|mitochondrial amidoxime reducing component 1##AK094105|MARC1|64757|mitochondrial amidoxime reducing component 1##AK290812|MARC1|64757|mitochondrial amidoxime reducing component 1##BC010619|MARC1|64757|mitochondrial amidoxime reducing component 1##AL136931|MARC2|54996|mitochondrial amidoxime reducing component 2##BC011973|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_017898|MARC2|54996|mitochondrial amidoxime reducing component 2##BC016859|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_024709|C1orf115|79762|chromosome 1 open reading frame 115##BC036067|C1orf115|79762|chromosome 1 open reading frame 115##AK091937|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK024208|C1orf115|79762|chromosome 1 open reading frame 115##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox	0.01763	
chr21	46974935	46975021	reg1013206.p2	8.872	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-12646	-	AK303168 NM_001205207	-20444	-	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	-99560	+	TSC_hg19_v1_chr21_+_47063638 AK310131	88651	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	294910	+	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	426707	+	U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1##AK310131|PCBP3|54039|poly(rC) binding protein 3##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1	0.996697	CTCF.p2:18:0.997
chr2	243088703	243088814	reg1015068.p2	8.872	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	-57899	+	AK090909 AX746675 BC113517 BC113519 NM_173821	-276876	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	-287734	-	None	None	None	None	None	None	None	None	None	AK298283|LOC728323|728323|uncharacterized LOC728323##AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1	0.973166	CTCF.p2:-5:0.973
chr6	41904134	41904250	reg1014471.p1	8.872	+	TSC_hg19_v1_chr6_+_41889236 CU690756	-14925	+	TSC_hg19_v1_chr6_+_41889209 AK314147 BC007340	-14983	+	BC062627 TSC_hg19_v1_chr6_+_41888994	-15199	+	AB385206 CR542246 DQ891748 DQ895130 BC011616 M90814 TSC_hg19_v1_chr6_-_41909544 AK315421 AK299187 M92287 NM_001136125 NM_001760	5307	-	TSC_hg19_v1_chr6_-_42016453 AK303452 AB209825 AK057206 AK097856	112226	-	NM_001136017 NM_001136126	112417	-	AK314147|BYSL|705|bystin-like##BC007340|BYSL|705|bystin-like##BC062627|BYSL|705|bystin-like##CR542246|CCND3|896|cyclin D3##DQ891748|CCND3|896|cyclin D3##DQ895130|CCND3|896|cyclin D3##BC011616|CCND3|896|cyclin D3##M90814|CCND3|896|cyclin D3##AK315421|CCND3|896|cyclin D3##AK299187|CCND3|896|cyclin D3##M92287|CCND3|896|cyclin D3##NM_001136125|CCND3|896|cyclin D3##NM_001760|CCND3|896|cyclin D3##AK303452|CCND3|896|cyclin D3##AB209825|CCND3|896|cyclin D3##AK057206|CCND3|896|cyclin D3##AK097856|CCND3|896|cyclin D3##NM_001136017|CCND3|896|cyclin D3##NM_001136126|CCND3|896|cyclin D3	0.732748	CTCF.p2:35:0.733
chr10	70767172	70767270	reg1014495.p1	8.871	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-18686	+	BC104671 NM_004728 TSC_hg19_v1_chr10_+_70715925 BC009432 U41387 AK315585 BC008071 BC004182 BC017228 AB527408 CU675917	-51289	+	TSC_hg19_v1_chr10_+_70661097 CU674120 DQ892547 DQ895758	-106104	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	80615	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	80663	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	116670	+	NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##BC104671|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##NM_004728|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC009432|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##U41387|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##AK315585|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC008071|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC004182|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC017228|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##DQ892547|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##DQ895758|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##NM_002727|SRGN|5552|serglycin##D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.018623	
chr2	142312499	142312629	reg1014986.p1	8.871	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-2774758	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-3053074	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-3053171	+	TSC_hg19_v1_chr2_-_142888540 AK054663	575992	-	AF176832 NM_018557	576705	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	1322642	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.794035	CTCF.p2:5:0.794
chr2	35568330	35568432	reg1014860.p1	8.871	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-1744036	-	AB020653 NM_015376	-1829440	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-1866685	+	TSC_hg19_v1_chr2_+_36582920 AY358371	1014581	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	1015021	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	1256901	-	BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	0.664434	CTCF.p2:24:0.664
chr17	73168008	73168127	reg1014497.p1	8.869	+	AY322169 AY322170 NM_001002032 NM_001002033 NM_016185 AF086910	-17294	-	DQ891909 DQ895094 DQ896835 EU176653 CU674698 AF177862 BC001420 TSC_hg19_v1_chr17_-_73150608 AF266846 AK223321 AK312613	-17515	-	TSC_hg19_v1_chr17_-_73127869 CU692564 BC002516 BC022334 BC008183 BC047763 BC017454 AF154829 AK000419 NM_001252377 NM_014595	-40210	-	DQ893036 DQ896277 AB528658 L76416 TSC_hg19_v1_chr17_-_73179000 AK024823 BC107853 AK225090 BC062713 X99585 AK225263	10904	-	TSC_hg19_v1_chr17_-_73179055 BC071646 AK311837 BC022340 BC068465 BC008450	10981	-	TSC_hg19_v1_chr17_-_73179069 BC070159 BC016775	11013	-	AY322169|HN1|51155|hematological and neurological expressed 1##AY322170|HN1|51155|hematological and neurological expressed 1##NM_001002032|HN1|51155|hematological and neurological expressed 1##NM_001002033|HN1|51155|hematological and neurological expressed 1##NM_016185|HN1|51155|hematological and neurological expressed 1##AF086910|HN1|51155|hematological and neurological expressed 1##DQ891909|HN1|51155|hematological and neurological expressed 1##DQ895094|HN1|51155|hematological and neurological expressed 1##DQ896835|HN1|51155|hematological and neurological expressed 1##EU176653|HN1|51155|hematological and neurological expressed 1##AF177862|HN1|51155|hematological and neurological expressed 1##BC001420|HN1|51155|hematological and neurological expressed 1##AF266846|HN1|51155|hematological and neurological expressed 1##AK223321|HN1|51155|hematological and neurological expressed 1##AK312613|HN1|51155|hematological and neurological expressed 1##BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic##AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic##DQ893036|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##DQ896277|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##L76416|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##AK024823|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC107853|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##AK225090|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC062713|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##X99585|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##AK225263|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC071646|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##AK311837|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC022340|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC068465|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC008450|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC070159|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC016775|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)	0.632945	CTCF.p2:13:0.633
chr22	41973043	41973128	reg1011633.p1	8.869	+	TSC_hg19_v1_chr22_+_41957014 NM_014460 AK313407 BC067113 AL834417	-16016	+	TSC_hg19_v1_chr22_-_41940495 AY092087 AK026524 AK129663 NM_138338 NM_001018050 NM_001018052 CR456459	-32585	-	TSC_hg19_v1_chr22_-_41940381 AB051452 BC088367 BC017248	-32732	-	CU013144 CU013432 AB528210 AK316580 U62526 U86070 CR456544 BC010855 D87810 TSC_hg19_v1_chr22_-_41985841 AK289368 BC016818 NM_002676	12755	-	AB528118 CU013008 CU013296 CR456458 BC093956 BC112179 BC171724 TSC_hg19_v1_chr22_-_42017031 AF038183	43851	-	TSC_hg19_v1_chr22_-_42017032 NM_015704	43982	-	NM_014460|CSDC2|27254|cold shock domain containing C2, RNA binding##AK313407|CSDC2|27254|cold shock domain containing C2, RNA binding##BC067113|CSDC2|27254|cold shock domain containing C2, RNA binding##AL834417|CSDC2|27254|cold shock domain containing C2, RNA binding##AY092087|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK026524|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK129663|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_138338|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018050|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018052|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##CR456459|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AB051452|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC088367|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC017248|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##CU013144|PMM1|5372|phosphomannomutase 1##CU013432|PMM1|5372|phosphomannomutase 1##AK316580|PMM1|5372|phosphomannomutase 1##U62526|PMM1|5372|phosphomannomutase 1##U86070|PMM1|5372|phosphomannomutase 1##CR456544|PMM1|5372|phosphomannomutase 1##BC010855|PMM1|5372|phosphomannomutase 1##D87810|PMM1|5372|phosphomannomutase 1##AK289368|PMM1|5372|phosphomannomutase 1##BC016818|PMM1|5372|phosphomannomutase 1##NM_002676|PMM1|5372|phosphomannomutase 1##CR456458|PPPDE2|27351|PPPDE peptidase domain containing 2##BC093956|PPPDE2|27351|PPPDE peptidase domain containing 2##BC112179|PPPDE2|27351|PPPDE peptidase domain containing 2##BC171724|PPPDE2|27351|PPPDE peptidase domain containing 2##AF038183|PPPDE2|27351|PPPDE peptidase domain containing 2##NM_015704|PPPDE2|27351|PPPDE peptidase domain containing 2	0.784213	CTCF.p2:10:0.784
chr7	28429156	28429294	reg1013564.p1	8.869	+	L05913 NM_182899	-90286	+	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	-208819	-	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	-209024	-	TSC_hg19_v1_chr7_+_28448986 BC087859	19763	+	L05515 NM_182898	22918	+	L05911 NM_004904	46008	+	L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##BC087859|LOC401317|401317|uncharacterized LOC401317##L05515|CREB5|9586|cAMP responsive element binding protein 5##NM_182898|CREB5|9586|cAMP responsive element binding protein 5##L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5	0.987499	CTCF.p2:-7:0.987
chr2	188445536	188445671	reg1012977.p1	8.868	+	TSC_hg19_v1_chr2_-_188419185 NM_001032281 NM_006287	-26402	-	J03225 AF021834 TSC_hg19_v1_chr2_-_188419163 AK313562 BC015514 BC014332	-26493	-	DQ280491 U17473 L76380 AK291630 AK292998 DQ280490 NM_005795	-132657	-	AK055718 NM_001252668 NM_001252669 NM_016315 TSC_hg19_v1_chr2_+_189156445	710822	+	AK314498 TSC_hg19_v1_chr2_+_189156621	711013	+	TSC_hg19_v1_chr2_+_189156656 BC001103	711059	+	NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##J03225|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AF021834|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK313562|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC015514|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC014332|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##DQ280491|CALCRL|10203|calcitonin receptor-like##U17473|CALCRL|10203|calcitonin receptor-like##L76380|CALCRL|10203|calcitonin receptor-like##AK291630|CALCRL|10203|calcitonin receptor-like##AK292998|CALCRL|10203|calcitonin receptor-like##NM_005795|CALCRL|10203|calcitonin receptor-like##AK055718|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252668|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252669|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_016315|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AK314498|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##BC001103|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	0.865937	CTCF.p2:-7:0.866
chr2	213641775	213641910	reg1013656.p1	8.868	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	-238527	-	AK316425 NM_001122634 AK302778 AY317138	-2183757	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-2220453	+	AK301503 AF130863 NM_016260	373213	-	BC028936 NM_001079526	374490	-	AK124960 NM_001242575	507086	-	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451	0.415359	CTCF.p2:-2:0.415
chr8	8887445	8887563	reg1013598.p1	8.868	+	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	-26999	+	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	-27139	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	-136566	-	TSC_hg19_v1_chr8_-_9008167 BC043388 AK024067 NM_024607	120674	-	TSC_hg19_v1_chr8_-_9009055 AK096119 NM_001201329	121596	-	TSC_hg19_v1_chr8_+_9413421 BC098394	525901	+	AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##BC043388|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK024067|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_024607|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK096119|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_001201329|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##BC098394|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	0.961001	CTCF.p2:0:0.961
chr14	22788330	22788450	reg1013785.p1	8.867	+	AB463964 NM_001001912 AY726598	-655068	+	NM_001005466 AB529274 BC137371 BC137382	-685344	-	AB528817 NM_001005465	-749516	-	X58763 TSC_hg19_v1_chr14_+_22989364	200959	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	269696	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	269744	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.988625	CTCF.p2:4:0.989
chr20	60732112	60732192	reg1011268.p1	8.866	+	TSC_hg19_v1_chr20_+_60718830 AK125656 AK291485 AK299881 NM_198935 BC034494 BX640848 AK308765 BC068993 AB014593 DQ890908 EU176499 AB383958	-13391	+	TSC_hg19_v1_chr20_-_60718451 BC014999 AF054185 BC001895 NM_002792	-13678	-	TSC_hg19_v1_chr20_-_60718410 AK312025 BC004427	-13730	-	TSC_hg19_v1_chr20_+_60758094 NM_015666 AK316027 AK316325 AK299147 AK299189 AK299726	25927	+	TSC_hg19_v1_chr20_-_60795335 AF140538 NM_007232	63173	-	AK291851 TSC_hg19_v1_chr20_+_60813576	81424	+	AK125656|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1##AK291485|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1##AK299881|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1##NM_198935|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1##BC034494|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1##BX640848|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1##AK308765|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1##BC068993|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1##AB014593|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1##DQ890908|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1##EU176499|SS18L1|26039|synovial sarcoma translocation gene on chromosome 18-like 1##BC014999|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##AF054185|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##BC001895|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##NM_002792|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##AK312025|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##BC004427|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##NM_015666|GTPBP5|26164|GTP binding protein 5 (putative)##AK316027|GTPBP5|26164|GTP binding protein 5 (putative)##AK316325|GTPBP5|26164|GTP binding protein 5 (putative)##AK299147|GTPBP5|26164|GTP binding protein 5 (putative)##AK299189|GTPBP5|26164|GTP binding protein 5 (putative)##AK299726|GTPBP5|26164|GTP binding protein 5 (putative)##AF140538|HRH3|11255|histamine receptor H3##NM_007232|HRH3|11255|histamine receptor H3##AK291851|OSBPL2|9885|oxysterol binding protein-like 2	0.99493	CTCF.p2:4:0.995
chr6	83041327	83041469	reg1016460.p1	8.866	+	TSC_hg19_v1_chr6_-_82957441 NM_015525 DQ005633 DQ005634	-83930	-	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	-83985	-	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	-578987	-	AK291170 NM_006670	31524	+	TSC_hg19_v1_chr6_+_83073565 BC037161 AK074786	32135	+	TSC_hg19_v1_chr6_+_83073996 AK074790 NM_001166392	32579	+	NM_015525|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005633|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005634|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein##BC037161|TPBG|7162|trophoblast glycoprotein##AK074786|TPBG|7162|trophoblast glycoprotein##AK074790|TPBG|7162|trophoblast glycoprotein##NM_001166392|TPBG|7162|trophoblast glycoprotein	0.30212	CTCF.p2:-10:0.302
chr7	134386147	134386286	reg1016388.p1	8.866	+	NM_001724 NM_199186 TSC_hg19_v1_chr7_+_134331586 BC017050 AK315439 AK097778 X04327	-54631	+	NM_001080538	-152368	+	AF524864 NM_020299 BC008837	-173846	+	TSC_hg19_v1_chr7_+_134464170 NM_004342 NM_033138 NM_033157 AK289686	77950	+	TSC_hg19_v1_chr7_+_134464387 AK298524 AK304729 AF247820 M83216	78173	+	TSC_hg19_v1_chr7_+_134464419 BC040354	78206	+	NM_001724|BPGM|669|2,3-bisphosphoglycerate mutase##NM_199186|BPGM|669|2,3-bisphosphoglycerate mutase##BC017050|BPGM|669|2,3-bisphosphoglycerate mutase##AK315439|BPGM|669|2,3-bisphosphoglycerate mutase##AK097778|BPGM|669|2,3-bisphosphoglycerate mutase##X04327|BPGM|669|2,3-bisphosphoglycerate mutase##NM_001080538|AKR1B15|441282|aldo-keto reductase family 1, member B15##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_004342|CALD1|800|caldesmon 1##NM_033138|CALD1|800|caldesmon 1##NM_033157|CALD1|800|caldesmon 1##AK289686|CALD1|800|caldesmon 1##AK298524|CALD1|800|caldesmon 1##AK304729|CALD1|800|caldesmon 1##AF247820|CALD1|800|caldesmon 1##M83216|CALD1|800|caldesmon 1##BC040354|CALD1|800|caldesmon 1	0.06387	
chr2	208557071	208557205	reg1016387.p1	8.865	+	TSC_hg19_v1_chr2_-_208490039 BC009462 AF455817	-67055	-	NM_001127395 TSC_hg19_v1_chr2_-_208489987	-67149	-	AK093812 AX748320 BC033720 NM_145280	-67443	-	TSC_hg19_v1_chr2_+_208576363 AK097751 NM_001142300 NM_152523	19163	+	TSC_hg19_v1_chr2_+_208576365 BC047293	19257	+	TSC_hg19_v1_chr2_+_208576466 BC067253	19362	+	BC009462|METTL21A|151194|methyltransferase like 21A##AF455817|METTL21A|151194|methyltransferase like 21A##NM_001127395|METTL21A|151194|methyltransferase like 21A##AK093812|METTL21A|151194|methyltransferase like 21A##BC033720|METTL21A|151194|methyltransferase like 21A##NM_145280|METTL21A|151194|methyltransferase like 21A##AK097751|CCNYL1|151195|cyclin Y-like 1##NM_001142300|CCNYL1|151195|cyclin Y-like 1##NM_152523|CCNYL1|151195|cyclin Y-like 1##BC047293|CCNYL1|151195|cyclin Y-like 1##BC067253|CCNYL1|151195|cyclin Y-like 1	0.0	
chr2	229183085	229183203	reg1016395.p1	8.865	+	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-136782	-	AK097409 NM_178821 BC036377 AK098821 AK301861	-446792	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	-504553	+	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	952861	-	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	1396104	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	1603517	-	HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12	0.796767	CTCF.p2:-6:0.797
chr4	186392568	186392704	reg1014314.p2	8.865	+	BC127739 BC141968 BC150574 NM_001114357	-42093	+	TSC_hg19_v1_chr4_-_186347130 AK002062 AK091635 NM_018359	-45547	-	AK303243 TSC_hg19_v1_chr4_+_186317996	-74656	+	BC038515 AK302815 AL833337 TSC_hg19_v1_chr4_-_186392907 AB080722 BC028419 BX641119 AK097605 NM_001145411 NM_152775	248	-	AK129863 BT007341 AB528880 CU674500 TSC_hg19_v1_chr4_-_186456662 AK222966 AF002280 AF002282 BC027870 AF039018 BC001017 AK313253 NM_001114107 NM_014476	64009	-	AK304653 TSC_hg19_v1_chr4_-_186577879 AK296461	185242	-	BC127739|C4orf47|441054|chromosome 4 open reading frame 47##BC141968|C4orf47|441054|chromosome 4 open reading frame 47##BC150574|C4orf47|441054|chromosome 4 open reading frame 47##NM_001114357|C4orf47|441054|chromosome 4 open reading frame 47##AK002062|UFSP2|55325|UFM1-specific peptidase 2##AK091635|UFSP2|55325|UFM1-specific peptidase 2##NM_018359|UFSP2|55325|UFM1-specific peptidase 2##AK303243|ANKRD37|353322|ankyrin repeat domain 37##BC038515|CCDC110|256309|coiled-coil domain containing 110##AK302815|CCDC110|256309|coiled-coil domain containing 110##AL833337|CCDC110|256309|coiled-coil domain containing 110##AB080722|CCDC110|256309|coiled-coil domain containing 110##BC028419|CCDC110|256309|coiled-coil domain containing 110##BX641119|CCDC110|256309|coiled-coil domain containing 110##AK097605|CCDC110|256309|coiled-coil domain containing 110##NM_001145411|CCDC110|256309|coiled-coil domain containing 110##NM_152775|CCDC110|256309|coiled-coil domain containing 110##AK129863|PDLIM3|27295|PDZ and LIM domain 3##BT007341|PDLIM3|27295|PDZ and LIM domain 3##AK222966|PDLIM3|27295|PDZ and LIM domain 3##AF002280|PDLIM3|27295|PDZ and LIM domain 3##AF002282|PDLIM3|27295|PDZ and LIM domain 3##BC027870|PDLIM3|27295|PDZ and LIM domain 3##AF039018|PDLIM3|27295|PDZ and LIM domain 3##BC001017|PDLIM3|27295|PDZ and LIM domain 3##AK313253|PDLIM3|27295|PDZ and LIM domain 3##NM_001114107|PDLIM3|27295|PDZ and LIM domain 3##NM_014476|PDLIM3|27295|PDZ and LIM domain 3##AK304653|SORBS2|8470|sorbin and SH3 domain containing 2##AK296461|SORBS2|8470|sorbin and SH3 domain containing 2	0.54	CTCF.p2:-46:0.540
chr5	180796092	180796230	reg1017520.p1	8.865	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-1884	+	TSC_hg19_v1_chr5_+_180688213 BC016291	-107934	+	AK054802 TSC_hg19_v1_chr5_-_180688115 BC007372 NM_032765 AB209243	-108036	-	None	None	None	None	None	None	None	None	None	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##AK054802|TRIM52|84851|tripartite motif containing 52##BC007372|TRIM52|84851|tripartite motif containing 52##NM_032765|TRIM52|84851|tripartite motif containing 52##AB209243|TRIM52|84851|tripartite motif containing 52	0.996754	CTCF.p2:6:0.997
chrX	71465465	71465588	reg1013398.p1	8.865	+	EU069463 BC111486 TSC_hg19_v1_chrX_-_71458867 NM_017669 AK056494	-6692	-	NM_001170747 NM_006223 BC093700 BC112281 HQ258728 TSC_hg19_v1_chrX_+_71401606 AB009690 BC005234 BC070288 BC111394 BC104653 AK127605 AF143096	-63951	+	AK126598 AY572224 NM_207422	-101493	+	BC000472 AK222479 AK293663 D28359 TSC_hg19_v1_chrX_-_71497070	31536	-	M58458 TSC_hg19_v1_chrX_-_71497102 AK311745 NM_001007	31608	-	NM_001144885 NM_001144887 TSC_hg19_v1_chrX_-_71525765	60238	-	EU069463|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like##BC111486|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like##NM_017669|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like##AK056494|ERCC6L|54821|excision repair cross-complementing rodent repair deficiency, complementation group 6-like##NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##HQ258728|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AK126598|FLJ44635|392490|TPT1-like protein##AY572224|FLJ44635|392490|TPT1-like protein##NM_207422|FLJ44635|392490|TPT1-like protein##BC000472|RPS4X|6191|ribosomal protein S4, X-linked##AK222479|RPS4X|6191|ribosomal protein S4, X-linked##M58458|RPS4X|6191|ribosomal protein S4, X-linked##AK311745|RPS4X|6191|ribosomal protein S4, X-linked##NM_001007|RPS4X|6191|ribosomal protein S4, X-linked##NM_001144885|CITED1|4435|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1##NM_001144887|CITED1|4435|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1	0.997227	CTCF.p2:1:0.997
chr5	108804630	108804736	reg1014805.p2	8.863	+	BC030826 AB007898 TSC_hg19_v1_chr5_-_108745619 AK291759 NM_014819	-59062	-	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	-720011	+	AK293376 J03358 NM_005246 AK296874	-721121	+	TSC_hg19_v1_chr5_+_109025072 BC031659	220381	+	TSC_hg19_v1_chr5_+_109025096 BC111062	220414	+	TSC_hg19_v1_chr5_+_109025138 NM_002372	220462	+	BC030826|PJA2|9867|praja ring finger 2##AB007898|PJA2|9867|praja ring finger 2##AK291759|PJA2|9867|praja ring finger 2##NM_014819|PJA2|9867|praja ring finger 2##AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1	0.798961	CTCF.p2:4:0.799
chr5	176829609	176829748	reg1014992.p1	8.863	+	BC132952 BC132954 NM_001029886	-2042	-	AK096088 NM_001167579 NM_003052 TSC_hg19_v1_chr5_+_176811434 AK298299 BC053349 BC035294 BC050385 L13258	-18236	+	TSC_hg19_v1_chr5_+_176794314 AK098150	-35365	+	TSC_hg19_v1_chr5_-_176831183 BT007350	1547	-	BC012390 TSC_hg19_v1_chr5_-_176831506	1782	-	M11723 M31315 TSC_hg19_v1_chr5_-_176836522	6827	-	BC132952|PFN3|345456|profilin 3##BC132954|PFN3|345456|profilin 3##NM_001029886|PFN3|345456|profilin 3##AK096088|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_001167579|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_003052|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK298299|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC053349|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC035294|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC050385|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##L13258|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK098150|RGS14|10636|regulator of G-protein signaling 14##BT007350|F12|2161|coagulation factor XII (Hageman factor)##BC012390|F12|2161|coagulation factor XII (Hageman factor)##M11723|F12|2161|coagulation factor XII (Hageman factor)##M31315|F12|2161|coagulation factor XII (Hageman factor)	0.222112	CTCF.p2:-6:0.222
chr14	99732989	99733114	reg1013904.p1	8.862	+	AK098639 NM_182560	-555102	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-2469336	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-2764267	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	4566	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	4839	-	BC120967 BC120968 BC127624 BC127625 TSC_hg19_v1_chr14_-_99947104	214043	-	AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##BC120967|SETD3|84193|SET domain containing 3##BC120968|SETD3|84193|SET domain containing 3##BC127624|SETD3|84193|SET domain containing 3##BC127625|SETD3|84193|SET domain containing 3	0.032306	
chr2	188708096	188708211	reg1014758.p2	8.862	+	TSC_hg19_v1_chr2_-_188419185 NM_001032281 NM_006287	-288952	-	J03225 AF021834 TSC_hg19_v1_chr2_-_188419163 AK313562 BC015514 BC014332	-289043	-	DQ280491 U17473 L76380 AK291630 AK292998 DQ280490 NM_005795	-395207	-	AK055718 NM_001252668 NM_001252669 NM_016315 TSC_hg19_v1_chr2_+_189156445	448272	+	AK314498 TSC_hg19_v1_chr2_+_189156621	448463	+	TSC_hg19_v1_chr2_+_189156656 BC001103	448509	+	NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##J03225|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AF021834|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK313562|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC015514|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC014332|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##DQ280491|CALCRL|10203|calcitonin receptor-like##U17473|CALCRL|10203|calcitonin receptor-like##L76380|CALCRL|10203|calcitonin receptor-like##AK291630|CALCRL|10203|calcitonin receptor-like##AK292998|CALCRL|10203|calcitonin receptor-like##NM_005795|CALCRL|10203|calcitonin receptor-like##AK055718|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252668|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252669|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_016315|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AK314498|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##BC001103|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	0.9983	CTCF.p2:5:0.998
chr4	114682969	114683115	reg1014704.p1	8.862	+	TSC_hg19_v1_chr4_-_114682923 NM_001221 NM_172114 NM_172115 NM_172127 NM_172128 NM_172129	-72	-	TSC_hg19_v1_chr4_-_114682619 AK055642 AB209288	-386	-	BC022558 TSC_hg19_v1_chr4_-_114682567	-476	-	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	217797	-	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	836541	+	NM_003360 U30930	860480	+	NM_001221|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172114|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172115|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172127|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172128|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172129|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK055642|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AB209288|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC022558|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8	0.070235	
chr6	80523720	80523834	reg1014725.p1	8.862	+	TSC_hg19_v1_chr6_+_80341019 AF340151 NM_031469 BC109043 BC109044 AK311757 BC040489 AK074506 BC052987 BC060799 BC070059 AJ297972	-182703	+	TSC_hg19_v1_chr6_-_80247114 AK299314 BX648161 BC050327 NM_001122769 NM_181714	-276648	-	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	-579352	-	NM_001243308	56359	-	TSC_hg19_v1_chr6_-_80656870 CU691582 DQ891229 AF277094 BC038506 AY037298 AK310625 AK312511 AK055277 DQ426871 NM_022726	133315	-	NM_001166691 NM_003318 TSC_hg19_v1_chr6_+_80714370 AX775733 BC032858 BC000633 AK292460	190575	+	AF340151|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_031469|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109043|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109044|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK311757|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC040489|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK074506|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC052987|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC060799|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC070059|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AJ297972|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK299314|LCA5|167691|Leber congenital amaurosis 5##BX648161|LCA5|167691|Leber congenital amaurosis 5##BC050327|LCA5|167691|Leber congenital amaurosis 5##NM_001122769|LCA5|167691|Leber congenital amaurosis 5##NM_181714|LCA5|167691|Leber congenital amaurosis 5##AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7##DQ891229|ELOVL4|6785|ELOVL fatty acid elongase 4##AF277094|ELOVL4|6785|ELOVL fatty acid elongase 4##BC038506|ELOVL4|6785|ELOVL fatty acid elongase 4##AY037298|ELOVL4|6785|ELOVL fatty acid elongase 4##AK310625|ELOVL4|6785|ELOVL fatty acid elongase 4##AK312511|ELOVL4|6785|ELOVL fatty acid elongase 4##AK055277|ELOVL4|6785|ELOVL fatty acid elongase 4##DQ426871|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_022726|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_001166691|TTK|7272|TTK protein kinase##NM_003318|TTK|7272|TTK protein kinase##AX775733|TTK|7272|TTK protein kinase##BC032858|TTK|7272|TTK protein kinase##BC000633|TTK|7272|TTK protein kinase##AK292460|TTK|7272|TTK protein kinase	0.997295	CTCF.p2:3:0.997
chr7	94024869	94024999	reg1014922.p2	8.862	+	TSC_hg19_v1_chr7_+_94024206 AK297786 AK223175 AK300194 Z74616 AK226074 BC042586 BC054498 Y00724 CU691094 AB384984	-663	+	J03464 NM_000089 X02488	-1062	+	BT009853 DQ894078 BC000899 TSC_hg19_v1_chr7_-_93633668 CR749267 AF007551 AK313984 BC012595 NM_005868	-391320	-	TSC_hg19_v1_chr7_+_94139172 BC029543 NM_022900 BC063284 AF397424	114188	+	AK123866 TSC_hg19_v1_chr7_+_94139376 AK314329 BC050313 AF355594	114445	+	AB117974 TSC_hg19_v1_chr7_-_94285409 AF516515 CU692388 DQ894063 EU176189	260459	-	AK297786|COL1A2|1278|collagen, type I, alpha 2##AK223175|COL1A2|1278|collagen, type I, alpha 2##AK300194|COL1A2|1278|collagen, type I, alpha 2##Z74616|COL1A2|1278|collagen, type I, alpha 2##AK226074|COL1A2|1278|collagen, type I, alpha 2##BC042586|COL1A2|1278|collagen, type I, alpha 2##BC054498|COL1A2|1278|collagen, type I, alpha 2##Y00724|COL1A2|1278|collagen, type I, alpha 2##J03464|COL1A2|1278|collagen, type I, alpha 2##NM_000089|COL1A2|1278|collagen, type I, alpha 2##X02488|COL1A2|1278|collagen, type I, alpha 2##BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC029543|CASD1|64921|CAS1 domain containing 1##NM_022900|CASD1|64921|CAS1 domain containing 1##BC063284|CASD1|64921|CAS1 domain containing 1##AF397424|CASD1|64921|CAS1 domain containing 1##AK123866|CASD1|64921|CAS1 domain containing 1##AK314329|CASD1|64921|CAS1 domain containing 1##BC050313|CASD1|64921|CAS1 domain containing 1##AF355594|CASD1|64921|CAS1 domain containing 1##AB117974|SGCE|8910|sarcoglycan, epsilon##AF516515|SGCE|8910|sarcoglycan, epsilon##DQ894063|SGCE|8910|sarcoglycan, epsilon##EU176189|SGCE|8910|sarcoglycan, epsilon	0.89514	CTCF.p2:10:0.895
chr8	144140174	144140286	reg1012231.p1	8.862	+	TSC_hg19_v1_chr8_+_144120683 BC073830 AK094450 NM_173687 BC120993 BC063497	-19555	+	TSC_hg19_v1_chr8_+_144102304 BC119708 BC119709 AB529045 U56145	-37903	+	TSC_hg19_v1_chr8_+_144099945 NM_001127213 NM_002346 AK223074 AK129615 AK311983 BC003392 U42376 Z68179	-40288	+	NM_002347	101226	-	BC030192 AB012293 TSC_hg19_v1_chr8_-_144241700	101459	-	BC053355 TSC_hg19_v1_chr8_-_144241739 BC028894 NM_001135655	101509	-	BC073830|C8orf31|286122|chromosome 8 open reading frame 31##AK094450|C8orf31|286122|chromosome 8 open reading frame 31##NM_173687|C8orf31|286122|chromosome 8 open reading frame 31##BC120993|C8orf31|286122|chromosome 8 open reading frame 31##BC063497|C8orf31|286122|chromosome 8 open reading frame 31##BC119708|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119709|LY6E|4061|lymphocyte antigen 6 complex, locus E##U56145|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_001127213|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002346|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK223074|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK129615|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK311983|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC003392|LY6E|4061|lymphocyte antigen 6 complex, locus E##U42376|LY6E|4061|lymphocyte antigen 6 complex, locus E##Z68179|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002347|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H##AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC053355|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC028894|LY6H|4062|lymphocyte antigen 6 complex, locus H##NM_001135655|LY6H|4062|lymphocyte antigen 6 complex, locus H	0.830069	CTCF.p2:23:0.830
chrX	147612144	147612267	reg1013829.p1	8.862	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-30017	+	BC034320 NM_152578 AY211917 AK098602	-549350	+	TSC_hg19_v1_chrX_+_146993685 CU691632	-618512	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	188407	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	974569	-	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	1010225	-	NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434	0.015735	
chr15	71944152	71944284	reg1017613.p1	8.861	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	-104638	+	NM_024817 BC140868	-510408	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-536347	-	AF121129 NM_014249 NM_016346 AF148128	158694	+	AK097557 NM_001166340	462380	+	NM_001172109 NM_001172110	465000	+	AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172109|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172110|SENP8|123228|SUMO/sentrin specific peptidase family member 8	0.971963	CTCF.p2:0:0.972
chr6	170950497	170950626	reg1016144.p1	8.861	+	AY948416 AY948417 AB587415 DQ893475 DQ896345 TSC_hg19_v1_chr6_-_170893696 S78085 BC082978 AK297343 BC008378 NM_001199462 NM_001199463 NM_001199464 BC067759 NM_001199461 NM_002598 NM_144781	-56832	-	NM_001172085 NM_003194 AK304648 TSC_hg19_v1_chr6_+_170863459 AK315222 BC110341 Z22828 AK298272 M55654 BC109054 BC109053	-87097	+	TSC_hg19_v1_chr6_-_170862392 AK058050 NM_002793	-88164	-	None	None	None	None	None	None	None	None	None	AY948416|PDCD2|5134|programmed cell death 2##AY948417|PDCD2|5134|programmed cell death 2##DQ893475|PDCD2|5134|programmed cell death 2##DQ896345|PDCD2|5134|programmed cell death 2##S78085|PDCD2|5134|programmed cell death 2##AK297343|PDCD2|5134|programmed cell death 2##BC008378|PDCD2|5134|programmed cell death 2##NM_001199462|PDCD2|5134|programmed cell death 2##NM_001199463|PDCD2|5134|programmed cell death 2##NM_001199464|PDCD2|5134|programmed cell death 2##BC067759|PDCD2|5134|programmed cell death 2##NM_001199461|PDCD2|5134|programmed cell death 2##NM_002598|PDCD2|5134|programmed cell death 2##NM_144781|PDCD2|5134|programmed cell death 2##NM_001172085|TBP|6908|TATA box binding protein##NM_003194|TBP|6908|TATA box binding protein##AK304648|TBP|6908|TATA box binding protein##AK315222|TBP|6908|TATA box binding protein##BC110341|TBP|6908|TATA box binding protein##Z22828|TBP|6908|TATA box binding protein##AK298272|TBP|6908|TATA box binding protein##M55654|TBP|6908|TATA box binding protein##BC109054|TBP|6908|TATA box binding protein##BC109053|TBP|6908|TATA box binding protein##AK058050|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##NM_002793|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1	0.996754	CTCF.p2:11:0.997
chr10	90625401	90625535	reg1017117.p1	8.860	+	AX721211 NM_144590	-13765	-	EF426484 NM_001128215	-62982	+	EF426483 NM_001102469	-104306	+	TSC_hg19_v1_chr10_+_90640003 AK056086 BC010846 NM_020799	14510	+	J05192 X13839 BC017554 TSC_hg19_v1_chr10_-_90712531 AK300353 BC093052 AK300664 AK313294 NM_001613	87076	-	NM_000043 NM_152871 NM_152872 BC012479 TSC_hg19_v1_chr10_+_90750342	124850	+	NM_144590|ANKRD22|118932|ankyrin repeat domain 22##EF426484|LIPM|340654|lipase, family member M##NM_001128215|LIPM|340654|lipase, family member M##EF426483|LIPN|643418|lipase, family member N##NM_001102469|LIPN|643418|lipase, family member N##AK056086|STAMBPL1|57559|STAM binding protein-like 1##BC010846|STAMBPL1|57559|STAM binding protein-like 1##NM_020799|STAMBPL1|57559|STAM binding protein-like 1##J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta##X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_000043|FAS|355|Fas (TNF receptor superfamily, member 6)##NM_152871|FAS|355|Fas (TNF receptor superfamily, member 6)##NM_152872|FAS|355|Fas (TNF receptor superfamily, member 6)##BC012479|FAS|355|Fas (TNF receptor superfamily, member 6)	0.92745	CTCF.p2:-10:0.927
chr14	77379692	77379848	reg1001092.p1	8.860	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-86975	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-100508	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-100560	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	114914	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	115290	-	AK124327 TSC_hg19_v1_chr14_-_77542533	162763	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.205421	CTCF.p2:-22:0.205
chr22	33056368	33056467	reg1013293.p1	8.860	+	NM_001033024 TSC_hg19_v1_chr22_+_32871279 AK297841 AK301716	-185137	+	TSC_hg19_v1_chr22_+_32870997 BX648151 BX648220	-185416	+	TSC_hg19_v1_chr22_+_32870950 AK291972 AF233225 AB385082 AM392740 CU013088 CU013376 EU176789 EU176790	-185457	+	NM_000362	140384	+	TSC_hg19_v1_chr22_+_33197690 AK311702 AK314871 AK298126 BC013086 U14394 AX801509 U02571 S78453 U67195	141277	+	BC014277 TSC_hg19_v1_chr22_+_33197759	141335	+	NM_001033024|FBXO7|25793|F-box protein 7##AK297841|FBXO7|25793|F-box protein 7##AK301716|FBXO7|25793|F-box protein 7##BX648151|FBXO7|25793|F-box protein 7##BX648220|FBXO7|25793|F-box protein 7##AK291972|FBXO7|25793|F-box protein 7##AF233225|FBXO7|25793|F-box protein 7##AM392740|FBXO7|25793|F-box protein 7##CU013088|FBXO7|25793|F-box protein 7##CU013376|FBXO7|25793|F-box protein 7##EU176789|FBXO7|25793|F-box protein 7##EU176790|FBXO7|25793|F-box protein 7##NM_000362|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK314871|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK298126|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC013086|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U14394|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U02571|TIMP3|7078|TIMP metallopeptidase inhibitor 3##S78453|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U67195|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3	0.999627	CTCF.p2:-9:1.000
chr22	51058969	51059077	reg1015225.p1	8.860	+	AF218778 NM_016431	-17462	+	TSC_hg19_v1_chr22_+_51039227 AK293580 BC047527 BC009940 AK294265 BC037271 CU679535 EU832803 GQ129402	-19811	+	TSC_hg19_v1_chr22_+_51039124 AF136382 NM_012324	-19894	+	TSC_hg19_v1_chr22_-_51066581 AK092752 X52151 BX648618 BC014210 AK098659 AB448736 AK301098 AK315011 NM_000487 NM_001085425 NM_001085426 NM_001085427 NM_001085428	7511	-	AB569469 NM_001080420	54046	+	AK310316 Y00970 NM_001097 CR456366 AB587466 CU012933 CU013221	117620	+	AF218778|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##NM_016431|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AK293580|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##BC047527|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##BC009940|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AK294265|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##BC037271|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##EU832803|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##GQ129402|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AF136382|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##NM_012324|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AK092752|ARSA|410|arylsulfatase A##X52151|ARSA|410|arylsulfatase A##BX648618|ARSA|410|arylsulfatase A##BC014210|ARSA|410|arylsulfatase A##AK098659|ARSA|410|arylsulfatase A##AB448736|ARSA|410|arylsulfatase A##AK301098|ARSA|410|arylsulfatase A##AK315011|ARSA|410|arylsulfatase A##NM_000487|ARSA|410|arylsulfatase A##NM_001085425|ARSA|410|arylsulfatase A##NM_001085426|ARSA|410|arylsulfatase A##NM_001085427|ARSA|410|arylsulfatase A##NM_001085428|ARSA|410|arylsulfatase A##AB569469|SHANK3|85358|SH3 and multiple ankyrin repeat domains 3##NM_001080420|SHANK3|85358|SH3 and multiple ankyrin repeat domains 3##AK310316|ACR|49|acrosin##Y00970|ACR|49|acrosin##NM_001097|ACR|49|acrosin##CR456366|ACR|49|acrosin##CU012933|ACR|49|acrosin##CU013221|ACR|49|acrosin	0.982435	CTCF.p2:-20:0.982
chr8	113813439	113813579	reg1016183.p1	8.860	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-2826543	-	NM_001099743 NM_001099744	-3109490	-	AK290469 NM_001099745 NM_001099746	-3120276	-	AB114605 NM_198124	575872	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	635620	-	TSC_hg19_v1_chr8_-_116680208 AK304046	2866711	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.997937	CTCF.p2:5:0.998
chr8	91013112	91013236	reg1013477.p1	8.860	+	TSC_hg19_v1_chr8_-_90996896 AK001017 AK289848 BC071590 BC040519 BX640816 NM_002485 AK312410	-16270	-	TSC_hg19_v1_chr8_-_90996804 AB528582 BC143065 BC143066 BC108650 BC016762 BC005293 AF058696 AF051334 AK223256 BC146797 BC136802 BC136803 BC144413	-16342	-	BC031054 NM_001126111 TSC_hg19_v1_chr8_+_90914816	-98380	+	NM_001359 BC105080 BC105082 BC143669 TSC_hg19_v1_chr8_+_91013704 AK300069 L26050	475	+	AB529128 X06661 BC006478 AK054881 AK312491 BC020864 NM_004929	81841	-	AK300583 AK123958 AL834364 TSC_hg19_v1_chr8_-_91657856	644624	-	AK001017|NBN|4683|nibrin##AK289848|NBN|4683|nibrin##BC071590|NBN|4683|nibrin##BC040519|NBN|4683|nibrin##BX640816|NBN|4683|nibrin##NM_002485|NBN|4683|nibrin##AK312410|NBN|4683|nibrin##BC143065|NBN|4683|nibrin##BC143066|NBN|4683|nibrin##BC108650|NBN|4683|nibrin##BC016762|NBN|4683|nibrin##BC005293|NBN|4683|nibrin##AF058696|NBN|4683|nibrin##AF051334|NBN|4683|nibrin##AK223256|NBN|4683|nibrin##BC146797|NBN|4683|nibrin##BC136802|NBN|4683|nibrin##BC136803|NBN|4683|nibrin##BC144413|NBN|4683|nibrin##BC031054|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_001126111|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_001359|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105080|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105082|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC143669|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK300069|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##L26050|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##X06661|CALB1|793|calbindin 1, 28kDa##BC006478|CALB1|793|calbindin 1, 28kDa##AK054881|CALB1|793|calbindin 1, 28kDa##AK312491|CALB1|793|calbindin 1, 28kDa##BC020864|CALB1|793|calbindin 1, 28kDa##NM_004929|CALB1|793|calbindin 1, 28kDa##AK300583|TMEM64|169200|transmembrane protein 64##AK123958|TMEM64|169200|transmembrane protein 64##AL834364|TMEM64|169200|transmembrane protein 64	0.013632	
chr8	66674207	66674331	reg1013709.p1	8.859	+	NM_001145838 CU692168 BX537854 D13634	-92102	+	NM_001145839 NM_014637 TSC_hg19_v1_chr8_+_66556973 AK316202 BX647507 AK304716 BC036116 BC043498 AK298945	-117309	+	TSC_hg19_v1_chr8_-_66546413 BC011607 BC018846 NM_018120	-127837	-	HQ258418 AK290801 BC058025 BC126360 NM_002603 U67932	26982	-	NM_001242318	79699	-	TSC_hg19_v1_chr8_-_66754300 AK292680	80023	-	NM_001145838|MTFR1|9650|mitochondrial fission regulator 1##BX537854|MTFR1|9650|mitochondrial fission regulator 1##D13634|MTFR1|9650|mitochondrial fission regulator 1##NM_001145839|MTFR1|9650|mitochondrial fission regulator 1##NM_014637|MTFR1|9650|mitochondrial fission regulator 1##AK316202|MTFR1|9650|mitochondrial fission regulator 1##BX647507|MTFR1|9650|mitochondrial fission regulator 1##AK304716|MTFR1|9650|mitochondrial fission regulator 1##BC036116|MTFR1|9650|mitochondrial fission regulator 1##BC043498|MTFR1|9650|mitochondrial fission regulator 1##AK298945|MTFR1|9650|mitochondrial fission regulator 1##BC011607|ARMC1|55156|armadillo repeat containing 1##BC018846|ARMC1|55156|armadillo repeat containing 1##NM_018120|ARMC1|55156|armadillo repeat containing 1##HQ258418|PDE7A|5150|phosphodiesterase 7A##AK290801|PDE7A|5150|phosphodiesterase 7A##BC058025|PDE7A|5150|phosphodiesterase 7A##BC126360|PDE7A|5150|phosphodiesterase 7A##NM_002603|PDE7A|5150|phosphodiesterase 7A##U67932|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##AK292680|PDE7A|5150|phosphodiesterase 7A	0.525571	CTCF.p2:-9:0.526
chr9	33287131	33287252	reg1015520.p1	8.859	+	TSC_hg19_v1_chr9_+_33265046 BC006974 BC020796 AF132968 AF161525 AB528724 CU675479 DQ893179 DQ896479 DQ896480	-22132	+	NM_001195536 NM_016410 TSC_hg19_v1_chr9_+_33265035 BC016698 BC007457 AK315455 AK024753 BC018603 BC021168 AK295744	-22235	+	AM392568 BC014774 TSC_hg19_v1_chr9_-_33264707 AK096038 AK316577 AF116273 BC002407 AK222749 AF022224 U46917 BC001936 Z35491 NM_001172415 NM_004323	-22583	-	NM_002504 NM_147133 NM_147134 TSC_hg19_v1_chr9_+_33290509 AF332009 AK291643 AL832342	3283	+	TSC_hg19_v1_chr9_+_33290543 AK225750 BC012151 AB385216 DQ893676 DQ895843	3362	+	AK310456 TSC_hg19_v1_chr9_-_33395273	108078	-	BC006974|CHMP5|51510|charged multivesicular body protein 5##BC020796|CHMP5|51510|charged multivesicular body protein 5##AF132968|CHMP5|51510|charged multivesicular body protein 5##AF161525|CHMP5|51510|charged multivesicular body protein 5##DQ893179|CHMP5|51510|charged multivesicular body protein 5##DQ896479|CHMP5|51510|charged multivesicular body protein 5##DQ896480|CHMP5|51510|charged multivesicular body protein 5##NM_001195536|CHMP5|51510|charged multivesicular body protein 5##NM_016410|CHMP5|51510|charged multivesicular body protein 5##BC016698|CHMP5|51510|charged multivesicular body protein 5##BC007457|CHMP5|51510|charged multivesicular body protein 5##AK315455|CHMP5|51510|charged multivesicular body protein 5##AK024753|CHMP5|51510|charged multivesicular body protein 5##BC018603|CHMP5|51510|charged multivesicular body protein 5##BC021168|CHMP5|51510|charged multivesicular body protein 5##AK295744|CHMP5|51510|charged multivesicular body protein 5##AM392568|BAG1|573|BCL2-associated athanogene##BC014774|BAG1|573|BCL2-associated athanogene##AK096038|BAG1|573|BCL2-associated athanogene##AK316577|BAG1|573|BCL2-associated athanogene##AF116273|BAG1|573|BCL2-associated athanogene##AK222749|BAG1|573|BCL2-associated athanogene##AF022224|BAG1|573|BCL2-associated athanogene##U46917|BAG1|573|BCL2-associated athanogene##BC001936|BAG1|573|BCL2-associated athanogene##Z35491|BAG1|573|BCL2-associated athanogene##NM_001172415|BAG1|573|BCL2-associated athanogene##NM_004323|BAG1|573|BCL2-associated athanogene##NM_002504|NFX1|4799|nuclear transcription factor, X-box binding 1##NM_147133|NFX1|4799|nuclear transcription factor, X-box binding 1##NM_147134|NFX1|4799|nuclear transcription factor, X-box binding 1##AF332009|NFX1|4799|nuclear transcription factor, X-box binding 1##AK291643|NFX1|4799|nuclear transcription factor, X-box binding 1##AL832342|NFX1|4799|nuclear transcription factor, X-box binding 1##AK225750|NFX1|4799|nuclear transcription factor, X-box binding 1##BC012151|NFX1|4799|nuclear transcription factor, X-box binding 1##DQ893676|NFX1|4799|nuclear transcription factor, X-box binding 1##DQ895843|NFX1|4799|nuclear transcription factor, X-box binding 1##AK310456|AQP7|364|aquaporin 7	0.995033	CTCF.p2:-6:0.995
chr6	24064473	24064613	reg1016949.p1	8.858	+	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	-1494818	+	X54394 X54393 GQ305133 M58594 NM_001163558	-1761496	-	BC015850 NM_000948	-1766814	-	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	61887	+	AF181722 NM_181337	292587	+	AF181721 NM_016356	293736	-	NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1##AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2	0.48473	CTCF.p2:-14:0.485
chr12	26272499	26272632	reg1017097.p1	8.857	+	NM_001164746 AK292333	-67072	+	AK290055 NM_001164747	-145878	+	TSC_hg19_v1_chr12_+_26111964 NM_001164748 NM_007211 BC030021 AB093206 AY665468 AY665469 AY665470 AY665471	-160564	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	5356	-	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	75726	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	76020	+	NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AK290055|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_001164747|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_001164748|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_007211|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##BC030021|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AB093206|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665468|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665469|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665470|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665471|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)	0.205793	CTCF.p2:-6:0.206
chr14	106974359	106974484	reg1013779.p2	8.857	+	BX640710 TSC_hg19_v1_chr14_-_106967543 AK097354 AK097357 L22586 AK092384 AK125238 AX747511 AK125703 AK092976 AX747834 AK097028 L06610	-6854	-	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	-7121	-	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	-35963	+	GQ232968 DQ454715 DQ454740 DQ454804 FJ840179 GU552701 FJ840340 GQ232950 GQ232981 GU552754 DQ454538 DQ454540 DQ454585 DQ523858 GU552713 AY003858 DQ454386 DQ454541 DQ454621 DQ454676 GU552719 GU552720 GU552767 AY003800 EF566901 DQ454598 DQ454606 DQ454788 DQ455001 DQ454592 Z11947 FJ873823 FJ873826 FJ873839 FJ873846 FJ873864 FJ873876 FJ873933 FJ873992 HM116214 EF175393 AY003851 EF175424 EU350424 GU358679 JF810268 EU099085 EU099261 AY206990 AF103064 AM279530 HM996031 GQ903512 AF103334 AF062095 AF103183 AF103113 L07311 AF165109 AY062321 HM774774 JN110645 JN110658 JN110671 JN110688 JN110706 JN110718 FJ385349 HM774039 HM774378 HM774566 HM774910 HQ704000 HQ704008 HQ704009 AY062300 HM774238 HM775050 AF103319 AF194121 HM775049 DQ100804 EU146317 EU146347 EU146389 DQ100818 DQ100905 AJ006652 AF485463 AF485473 AY423189 AY423190 AY423196 AY423198 AY423199 AY423207 HM996483 AF103257 AY941883 DQ100909 AF006520 AJ249628 AY866746 DQ187712 DQ524024 GU570284 HM995016 HM995139 HM995190 HM995191 HM995236 HM995887 HM995889 HM995890 HM995891 HM995919 HM996054 HM996304 HM996511 AJ245323 AJ245324 DQ322799 DQ840839 DQ840841 DQ926120 DQ926247 DQ926326 AB374202 AF115123 AF174048 AJ245353 AJ245354 AJ245355 AJ278773 AY640567 AY866807 AY941926 AY944711 DQ100900 DQ100918 DQ926040 DQ926081 DQ926084 DQ926450 DQ926565 DQ926602 DQ926604 EU794403 Z18824 AB021525 AB063673 AB363090 AB363101 AB363126 AB363166 AF021949 AF021979 AF035023 AF052525 AF062215 AF062235 AF129457 AF174081 AF398962 AF408730 AF455546 AF455553 AF471175 AF471178 AF471201 AF471216 AF471265 AF471373 AF471475 AF471476 AF471477 AF471486 AF471490 AF471494 AF471528 AJ239363 AJ239370 AJ389190 AJ413993 AJ627249 AM040520 AM040566 AM259133 AM259134 AY466507 AY866733 AY866738 AY866759 AY866795 AY941854 AY941870 AY941906 AY941952 AY941974 AY941976 AY941980 AY962566 D83682 DQ065617 DQ205182 DQ212502 DQ212503 DQ535300 DQ535366 DQ535419 DQ535472 DQ926167 DQ926385 DQ926389 DQ926413 DQ926426 DQ926459 DQ926557 DQ926616 EF177950 EU549721 FJ492926 GQ903506 GU570336 GU570338 GU570341 HM152510 U00501 U77374 X59703 X87449 Z33898 Z96965 Z98722 AF283800 AJ519241 HM995874 AJ519332 L28051 AJ519250 AJ519294 AY392920 AY393056 L08082 AF062182 AF062206 AF062253 AF062285 AY190818 X81729 Z47218 TSC_hg19_v1_chr14_-_106994347 AK097076 AK097206 AK097859 AK126358 AK128664 AK130501 AK301358 BX640853 BX640854	19753	-	DQ187707 GU552700 GU552764 AY003783 EF175429 FJ694883 EU099078 EU099213 AM183990 EU099124 HM774924 HM774242 JN110729 JN110849 AF103239 FJ385422 FJ385433 HM773968 HM773995 HM774338 HM774389 HM774601 HM774867 HM996424 HQ704020 FJ385411 EU146318 JN110975 AF062300 AF062305 DQ524053 HM994912 HM994914 HM994916 HM994920 HM995673 HM995674 HM995675 HM995676 HM995783 HM995910 HM995945 HM996441 HM996522 AF062299 AF471505 DQ187607 DQ322806 DQ840692 DQ840693 DQ840702 DQ840814 AM279609 DQ926615 EF178081 X99992 AB063924 AB066892 AB066969 AB067011 AB067080 AB067263 AF394199 AF455925 AF459632 AF471500 AF471503 AF471504 AJ300805 AJ579185 AY055477 AY055483 AY640482 AY941852 D83692 DQ005278 DQ005282 DQ100801 DQ926649 GU570351 GU570352 GU570354 L12185 L12186 X64240 Y11898 Z96974 HM995768 AJ519245 AJ519224 AJ519230 AJ519233 AJ519246 AJ519249 AJ519251 AJ519253 AJ519255 HM995877 AJ519222 AJ519299 AY393054 AY393058 AY393158 AY393161 AY190818 Z36887 AY623427 X52894 BC090938 TSC_hg19_v1_chr14_-_107013458	38869	-	TSC_hg19_v1_chr14_-_107013478 AK093806 AK097303 AK125632 AK126320 AK129510 AX748317	39055	-	BX640710|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK097354|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097357|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK092384|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125238|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092976|IGHM|3507|immunoglobulin heavy constant mu##AK097028|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221##AF035023|IGHV3-48|28424|immunoglobulin heavy variable 3-48##AK097076|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097859|IGHM|3507|immunoglobulin heavy constant mu##AK128664|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130501|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640854|IGH@|3492|immunoglobulin heavy locus##AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.404915	CTCF.p2:12:0.405
chr16	78959119	78959226	reg1013288.p1	8.857	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-825717	+	NM_001244755	-896187	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	-902722	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	675443	-	AF125108 NM_130897 BC054892 BC035232	1615716	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	1878875	-	NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2	0.987905	CTCF.p2:1:0.988
chr17	72086177	72086282	reg1015008.p1	8.857	+	NM_001144952	-446003	-	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-778089	-	BC157870 NM_001129885	-828211	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	113586	+	TSC_hg19_v1_chr17_+_72199849 BC000603	113624	+	TSC_hg19_v1_chr17_+_72209709 NM_032646 BC107492 BC107602 AK315163 AF319952 BC005168	123440	+	NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38##NM_032646|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107492|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107602|TTYH2|94015|tweety homolog 2 (Drosophila)##AK315163|TTYH2|94015|tweety homolog 2 (Drosophila)##AF319952|TTYH2|94015|tweety homolog 2 (Drosophila)##BC005168|TTYH2|94015|tweety homolog 2 (Drosophila)	1.023539	CTCF.p2:-22:0.999
chr11	35507389	35507496	reg1013696.p1	8.856	+	S83375 U01824 TSC_hg19_v1_chr11_-_35441572 AK122843 NM_001195728 NM_001252652	-65887	-	TSC_hg19_v1_chr11_-_35441106 NM_004171	-66339	-	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	-66731	-	AL832391 AK316188 TSC_hg19_v1_chr11_-_35547165 AY358346 AK027841 AK300185 BC089434 NM_001001991 NM_015430	39717	-	NM_014344 TSC_hg19_v1_chr11_+_35640006 AK315015 BC049171 BC071898 AJ245599	132452	+	TSC_hg19_v1_chr11_+_35684404 BC013166 NM_017583	176931	+	U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AL832391|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##AK316188|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##AY358346|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##AK027841|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##AK300185|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##BC089434|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##NM_001001991|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##NM_015430|PAMR1|25891|peptidase domain containing associated with muscle regeneration 1##NM_014344|FJX1|24147|four jointed box 1 (Drosophila)##AK315015|FJX1|24147|four jointed box 1 (Drosophila)##BC049171|FJX1|24147|four jointed box 1 (Drosophila)##BC071898|FJX1|24147|four jointed box 1 (Drosophila)##AJ245599|FJX1|24147|four jointed box 1 (Drosophila)##BC013166|TRIM44|54765|tripartite motif containing 44##NM_017583|TRIM44|54765|tripartite motif containing 44	0.997403	CTCF.p2:-7:0.997
chr8	70744712	70744829	reg1013999.p2	8.856	+	AY101175 TSC_hg19_v1_chr8_+_70405081 AK055607 BX571746	-339681	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	-339731	+	TSC_hg19_v1_chr8_+_70379077 AK307951	-365690	+	BC137424 BC144618 NM_001146009	633	-	AK022760 NM_001146008	854	-	AK308488 AF205075 AK096879 NM_030958	2479	-	AY101175|SULF1|23213|sulfatase 1##AK055607|SULF1|23213|sulfatase 1##BX571746|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	0.909007	CTCF.p2:3:0.909
chrX	135690813	135690932	reg1013635.p1	8.856	+	BC000045 NM_016267 AK309912 BC003362 AF137387	-76505	+	BC009896 NM_014500 TSC_hg19_v1_chrX_+_135579729 AK299403 AK225870 U76992 CU679521 EU176345 BT006886	-111116	+	AB209303 NM_001163280 TSC_hg19_v1_chrX_+_135579394	-111555	+	BC071754 NM_000074 AK292637 X68550 X67878 L07414 BC074950 X96710 Z15017 FN298241 CU687160 AB590912 AF529195 AY197739	39499	+	AK129909 TSC_hg19_v1_chrX_-_135749484	58594	-	AK294929 TSC_hg19_v1_chrX_-_135849503 AK295709 AK299861	158635	-	BC000045|VGLL1|51442|vestigial like 1 (Drosophila)##NM_016267|VGLL1|51442|vestigial like 1 (Drosophila)##AK309912|VGLL1|51442|vestigial like 1 (Drosophila)##BC003362|VGLL1|51442|vestigial like 1 (Drosophila)##AF137387|VGLL1|51442|vestigial like 1 (Drosophila)##BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1##NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1##AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1##AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1##U76992|HTATSF1|27336|HIV-1 Tat specific factor 1##EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1##BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1##AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1##NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1##BC071754|CD40LG|959|CD40 ligand##NM_000074|CD40LG|959|CD40 ligand##AK292637|CD40LG|959|CD40 ligand##X68550|CD40LG|959|CD40 ligand##X67878|CD40LG|959|CD40 ligand##L07414|CD40LG|959|CD40 ligand##BC074950|CD40LG|959|CD40 ligand##Z15017|CD40LG|959|CD40 ligand##FN298241|CD40LG|959|CD40 ligand##AF529195|CD40LG|959|CD40 ligand##AY197739|CD40LG|959|CD40 ligand##AK129909|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK294929|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK295709|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK299861|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	0.709223	CTCF.p2:-2:0.709
chr2	204090294	204090400	reg1012102.p1	8.855	+	AB209471 TSC_hg19_v1_chr2_+_204055414	-34938	+	TSC_hg19_v1_chr2_+_203879597 AK096293 NM_001114132 BC132950 BC137214 BC144532 BC144533 AB053318	-210723	+	TSC_hg19_v1_chr2_+_203776997 BC021999 AL834188 NM_001104586 AY032876 AK310640 AK308171 AK022737 AK295499 AK299366 AK304014 AK316432 AK295703 AB053310 NM_024744	-313324	+	NM_177538	12816	+	TSC_hg19_v1_chr2_+_204103740 AF183412 AK297082 BC093022 BC033752 BC020616 AL832998 AY359068 AK307931 DQ890918 DQ894068 DQ894069 CU676580	13374	+	TSC_hg19_v1_chr2_+_204193004 NM_005759 AK311427 AK302853 AK294429 AK299824 AK316000 BC001439 AB590360 AF260261 BT009920 CU674706 DQ890735 DQ893907	102788	+	AB209471|RPL12|6136|ribosomal protein L12##NM_001114132|NBEAL1|65065|neurobeachin-like 1##BC132950|NBEAL1|65065|neurobeachin-like 1##BC137214|NBEAL1|65065|neurobeachin-like 1##BC144532|NBEAL1|65065|neurobeachin-like 1##BC144533|NBEAL1|65065|neurobeachin-like 1##AB053318|NBEAL1|65065|neurobeachin-like 1##BC021999|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AL834188|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##NM_001104586|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AY032876|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK310640|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK308171|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK022737|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK295499|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK299366|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK304014|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK316432|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK295703|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AB053310|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##NM_024744|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##NM_177538|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AF183412|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK297082|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC093022|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC033752|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC020616|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AL832998|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AY359068|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK307931|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ890918|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ894068|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ894069|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##NM_005759|ABI2|10152|abl-interactor 2##AK302853|ABI2|10152|abl-interactor 2##AK294429|ABI2|10152|abl-interactor 2##AK299824|ABI2|10152|abl-interactor 2##AK316000|ABI2|10152|abl-interactor 2##BC001439|ABI2|10152|abl-interactor 2##AF260261|ABI2|10152|abl-interactor 2##BT009920|ABI2|10152|abl-interactor 2##DQ890735|ABI2|10152|abl-interactor 2##DQ893907|ABI2|10152|abl-interactor 2	0.466343	CTCF.p2:0:0.466
chr12	81104339	81104455	reg1016464.p1	8.854	+	NM_002469 AK313287 X52011 BC017834 AB587443 CU676084 DQ893248 DQ896577 CR407641 CR541763	-2945	+	NM_001145026	-266272	+	NM_173591	-501165	+	TSC_hg19_v1_chr12_+_81110690 NM_005593 BC069373 X14894 AB528948 BT019399	6368	+	TSC_hg19_v1_chr12_-_81331470 AK309256	227070	-	TSC_hg19_v1_chr12_-_81331487 AB528898 CR407680 BC099921 AK315321 BC046926 BC062332 BC118609 BC122561 AF087693 AF173081 NM_004664	227193	-	NM_002469|MYF6|4618|myogenic factor 6 (herculin)##AK313287|MYF6|4618|myogenic factor 6 (herculin)##X52011|MYF6|4618|myogenic factor 6 (herculin)##BC017834|MYF6|4618|myogenic factor 6 (herculin)##DQ893248|MYF6|4618|myogenic factor 6 (herculin)##DQ896577|MYF6|4618|myogenic factor 6 (herculin)##CR407641|MYF6|4618|myogenic factor 6 (herculin)##CR541763|MYF6|4618|myogenic factor 6 (herculin)##NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q##NM_173591|OTOGL|283310|otogelin-like##NM_005593|MYF5|4617|myogenic factor 5##BC069373|MYF5|4617|myogenic factor 5##X14894|MYF5|4617|myogenic factor 5##BT019399|MYF5|4617|myogenic factor 5##AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)##CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)##BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)##AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)##BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)##BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)##BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)##BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)##AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)##AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)##NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)	0.993495	CTCF.p2:1:0.993
chr15	74365411	74365520	reg1015969.p1	8.854	+	TSC_hg19_v1_chr15_+_74287153 AB384942 CU674024 BT009911	-78309	+	TSC_hg19_v1_chr15_+_74287135 M79462 M79463 M79464 M80185 AB208950	-78326	+	TSC_hg19_v1_chr15_+_74287128 AK300256 AK300951	-78346	+	BC131515 AK292574 AF263742 NM_001038640	9415	-	AK092302 AX747465 AB040898 BC152429 NM_001130136	56241	+	AK309388 NM_001130137 BC028042	56527	+	BT009911|PML|5371|promyelocytic leukemia##M79462|PML|5371|promyelocytic leukemia##M79463|PML|5371|promyelocytic leukemia##M79464|PML|5371|promyelocytic leukemia##M80185|PML|5371|promyelocytic leukemia##AB208950|PML|5371|promyelocytic leukemia##AK300256|PML|5371|promyelocytic leukemia##BC131515|GOLGA6A|342096|golgin A6 family, member A##AK292574|GOLGA6A|342096|golgin A6 family, member A##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001038640|GOLGA6A|342096|golgin A6 family, member A##AK092302|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AB040898|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC152429|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130136|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130137|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC028042|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	0.835639	CTCF.p2:3:0.836
chr16	20397183	20397314	reg1016308.p1	8.854	+	AK127643 AK055722 AK091961 AK096043 AX747279 M15881 BC035975 AK127648 NM_001008389 NM_003361	-33216	-	U36221 AK312277 BX647831 BX648201 BX649067 BX648023 NM_001007240 NM_001007241 NM_001007242 NM_001502 CR749600	-58395	-	AB196529 AY635179 BC137237 BC137238 BC144547 NM_001002911 AK291384	-312161	-	BC042607 BC044936 NM_174924 AK097476	18797	-	TSC_hg19_v1_chr16_+_20420855 BC016703 BC068516 NM_017888 AK000588 BC013753	23612	+	NM_001010845 AK298359 AK055867 AK303774 AK096039 AK298434 BC125175 BC125176	65653	+	AK127643|UMOD|7369|uromodulin##AK055722|UMOD|7369|uromodulin##AK091961|UMOD|7369|uromodulin##AK096043|UMOD|7369|uromodulin##M15881|UMOD|7369|uromodulin##BC035975|UMOD|7369|uromodulin##AK127648|UMOD|7369|uromodulin##NM_001008389|UMOD|7369|uromodulin##NM_003361|UMOD|7369|uromodulin##U36221|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK312277|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX647831|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648201|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX649067|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648023|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007240|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007241|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007242|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001502|GP2|2813|glycoprotein 2 (zymogen granule membrane)##CR749600|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AB196529|GPR139|124274|G protein-coupled receptor 139##AY635179|GPR139|124274|G protein-coupled receptor 139##BC137237|GPR139|124274|G protein-coupled receptor 139##BC137238|GPR139|124274|G protein-coupled receptor 139##NM_001002911|GPR139|124274|G protein-coupled receptor 139##AK291384|GPR139|124274|G protein-coupled receptor 139##BC042607|PDILT|204474|protein disulfide isomerase-like, testis expressed##BC044936|PDILT|204474|protein disulfide isomerase-like, testis expressed##NM_174924|PDILT|204474|protein disulfide isomerase-like, testis expressed##AK097476|PDILT|204474|protein disulfide isomerase-like, testis expressed##BC016703|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##BC068516|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##NM_017888|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##AK000588|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##BC013753|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##NM_001010845|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK298359|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK055867|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK303774|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK096039|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK298434|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC125175|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC125176|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A	0.99635	CTCF.p2:7:0.996
chr8	87368996	87369146	reg1016790.p1	8.854	+	TSC_hg19_v1_chr8_+_87354966 AY345857 AK292800 BC036065 NM_007013	-14021	+	AJ417661 BC125165 BC125166 AK055815 NM_138817 BC029436	-126513	-	BC065207 TSC_hg19_v1_chr8_+_87111138 AK096027 NM_152565 AY079172	-257927	+	CU679433 BX640636 AK303122 TSC_hg19_v1_chr8_-_87520885 BC009671 AK297896 AF151848 AK000672	151842	-	TSC_hg19_v1_chr8_-_87520981 NM_016033	151925	-	TSC_hg19_v1_chr8_+_87526660 NM_003909	157582	+	AY345857|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##AK292800|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##BC036065|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##NM_007013|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##AJ417661|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC125165|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC125166|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##AK055815|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##NM_138817|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC029436|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##BX640636|FAM82B|51115|family with sequence similarity 82, member B##AK303122|FAM82B|51115|family with sequence similarity 82, member B##BC009671|FAM82B|51115|family with sequence similarity 82, member B##AK297896|FAM82B|51115|family with sequence similarity 82, member B##AF151848|FAM82B|51115|family with sequence similarity 82, member B##AK000672|FAM82B|51115|family with sequence similarity 82, member B##NM_016033|FAM82B|51115|family with sequence similarity 82, member B##NM_003909|CPNE3|8895|copine III	0.834321	CTCF.p2:18:0.834
chr13	101754040	101754137	reg1011700.p1	8.853	+	NM_001079669 NM_032813 TSC_hg19_v1_chr13_-_101327108	-426979	-	AK299859 TSC_hg19_v1_chr13_-_101327050 BX648008 AK056409 AK290345 BX647956	-427032	-	TSC_hg19_v1_chr13_-_101241029 AK095850 NM_001195087	-513061	-	AY141972 AK094669 BC012128 NM_052867 TSC_hg19_v1_chr13_-_102068817	314673	-	TSC_hg19_v1_chr13_-_102068838 BC028390	314752	-	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	350907	+	NM_001079669|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##NM_032813|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK095850|A2LD1|87769|AIG2-like domain 1##NM_001195087|A2LD1|87769|AIG2-like domain 1##AY141972|NALCN|259232|sodium leak channel, non-selective##AK094669|NALCN|259232|sodium leak channel, non-selective##BC012128|NALCN|259232|sodium leak channel, non-selective##NM_052867|NALCN|259232|sodium leak channel, non-selective##BC028390|NALCN|259232|sodium leak channel, non-selective##AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	0.729629	CTCF.p2:1:0.730
chr16	69184182	69184311	reg1015220.p1	8.853	+	TSC_hg19_v1_chr16_+_69166551 AK027634 AK027675 AK310104 AB075868 BC009348	-17693	+	TSC_hg19_v1_chr16_+_69166532 BX647265 AK074795	-17719	+	TSC_hg19_v1_chr16_+_69166515 NM_032830	-17744	+	TSC_hg19_v1_chr16_+_69221066 BC031058 AF243385 NM_006750 U40572 BC048215 EU831451 EU831538	36782	+	TSC_hg19_v1_chr16_+_69345258 AK315026 AF132747 AF159063 AF255952 NM_013245 BC047932 AF112215 CU690536 EU831747	161086	+	TSC_hg19_v1_chr16_-_69364492 AF322879 BC019912 AF239156 NM_022341	180246	-	AK027634|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK027675|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK310104|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AB075868|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##BC009348|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##BX647265|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK074795|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##NM_032830|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##BC031058|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##AF243385|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##NM_006750|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##U40572|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##BC048215|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##EU831451|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##EU831538|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##AK315026|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF132747|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF159063|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF255952|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##NM_013245|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##BC047932|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF112215|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##EU831747|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF322879|PDF|64146|peptide deformylase (mitochondrial)##BC019912|PDF|64146|peptide deformylase (mitochondrial)##AF239156|PDF|64146|peptide deformylase (mitochondrial)##NM_022341|PDF|64146|peptide deformylase (mitochondrial)	0.696692	CTCF.p2:-6:0.697
chr2	210199292	210199432	reg1016287.p1	8.853	+	BC036811 NM_005048 U25128 HQ257935 AY497546	-927701	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-974737	+	TSC_hg19_v1_chr2_+_209131083 AK127769	-1068279	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	89392	+	BC110423 TSC_hg19_v1_chr2_+_210444185	244808	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	245032	+	BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##AK294181|PTH2R|5746|parathyroid hormone 2 receptor##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC110423|MAP2|4133|microtubule-associated protein 2##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2	0.998271	CTCF.p2:-11:0.998
chr20	40367362	40367484	reg1016025.p1	8.852	+	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-120362	-	AB089149 NM_052846	-371926	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	-397908	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	1451087	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	1719069	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	1719180	+	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3##AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6	0.932787	CTCF.p2:-6:0.933
chr4	139443704	139443847	reg1015145.p2	8.852	+	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	-280411	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-990133	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-990183	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	493218	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	561628	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	561836	-	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.900028	CTCF.p2:0:0.900
chr11	14440492	14440625	reg1015491.p1	8.850	+	AK300103 NM_001177314	-54507	-	TSC_hg19_v1_chr11_-_14380730 BC013106 AK299606 AK313976 NM_012250	-59881	-	AK309550 AK309683 NM_001177315 NM_001102669	-60507	-	TSC_hg19_v1_chr11_-_14521358 AF084457 AF111807 BC012572 AL136593	80792	-	TSC_hg19_v1_chr11_-_14521392 BC037280 NM_016451 NM_001144062 NM_001144061	80855	-	TSC_hg19_v1_chr11_-_14541879 BC022372 D00759	101318	-	AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##BC013106|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK299606|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK313976|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_012250|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AF084457|COPB1|1315|coatomer protein complex, subunit beta 1##AF111807|COPB1|1315|coatomer protein complex, subunit beta 1##BC012572|COPB1|1315|coatomer protein complex, subunit beta 1##AL136593|COPB1|1315|coatomer protein complex, subunit beta 1##BC037280|COPB1|1315|coatomer protein complex, subunit beta 1##NM_016451|COPB1|1315|coatomer protein complex, subunit beta 1##NM_001144062|COPB1|1315|coatomer protein complex, subunit beta 1##NM_001144061|COPB1|1315|coatomer protein complex, subunit beta 1##BC022372|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1##D00759|PSMA1|5682|proteasome (prosome, macropain) subunit, alpha type, 1	0.0	
chr2	213012757	213012916	reg1012404.p1	8.850	+	AK316425 NM_001122634 AK302778 AY317138	-1554751	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-1591447	+	NM_001122633 AB208800	-1670418	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	390479	-	AK301503 AF130863 NM_016260	1002219	-	BC028936 NM_001079526	1003496	-	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	0.996769	CTCF.p2:3:0.997
chr12	29025740	29025859	reg1014147.p2	8.849	+	AY289196 NM_018318 AB587421	-615659	+	TSC_hg19_v1_chr12_+_28343404 BC035168	-682388	+	NM_002820 NM_198965	-900884	-	AL136843 TSC_hg19_v1_chr12_+_29302210 AK001324 AK314670 BC018460	276393	+	TSC_hg19_v1_chr12_+_29376598 BC022267 NM_018099 AK027756 AK129857 AK001927	350872	+	TSC_hg19_v1_chr12_-_29534081 BC064522	508276	-	AY289196|CCDC91|55297|coiled-coil domain containing 91##NM_018318|CCDC91|55297|coiled-coil domain containing 91##NM_002820|PTHLH|5744|parathyroid hormone-like hormone##NM_198965|PTHLH|5744|parathyroid hormone-like hormone##AL136843|FAR2|55711|fatty acyl CoA reductase 2##AK001324|FAR2|55711|fatty acyl CoA reductase 2##AK314670|FAR2|55711|fatty acyl CoA reductase 2##BC022267|FAR2|55711|fatty acyl CoA reductase 2##NM_018099|FAR2|55711|fatty acyl CoA reductase 2##AK027756|FAR2|55711|fatty acyl CoA reductase 2##AK129857|FAR2|55711|fatty acyl CoA reductase 2##AK001927|FAR2|55711|fatty acyl CoA reductase 2##BC064522|ERGIC2|51290|ERGIC and golgi 2	0.718	CTCF.p2:4:0.718
chr17	43472591	43472733	reg1015833.p1	8.849	+	TSC_hg19_v1_chr17_-_43394387 BC035576 BC022296 AK290203 AK313085 NM_003954	-78287	-	BC028124 AF433663 AK302184 AK058143 NM_152343	-133207	-	TSC_hg19_v1_chr17_+_43325300 AK311429	-147358	+	TSC_hg19_v1_chr17_-_43487753 AK092891 AX747793 AK300880	15088	-	TSC_hg19_v1_chr17_-_43503000 AK125535 NM_199282	30339	-	TSC_hg19_v1_chr17_-_43510237 AK290650	37565	-	BC035576|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC022296|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK290203|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK313085|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##NM_003954|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC028124|C17orf46|124783|chromosome 17 open reading frame 46##AF433663|C17orf46|124783|chromosome 17 open reading frame 46##AK302184|C17orf46|124783|chromosome 17 open reading frame 46##AK058143|C17orf46|124783|chromosome 17 open reading frame 46##NM_152343|C17orf46|124783|chromosome 17 open reading frame 46##AK311429|LOC100133991|100133991|uncharacterized LOC100133991##AK092891|ARHGAP27|201176|Rho GTPase activating protein 27##AK300880|ARHGAP27|201176|Rho GTPase activating protein 27##AK125535|ARHGAP27|201176|Rho GTPase activating protein 27##NM_199282|ARHGAP27|201176|Rho GTPase activating protein 27##AK290650|ARHGAP27|201176|Rho GTPase activating protein 27	0.954926	CTCF.p2:0:0.955
chrX	56794885	56795030	reg1014461.p4	8.849	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-39266	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-204906	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-536047	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	227014	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	352971	-	BC071694 NM_019003	369100	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.488383	CTCF.p2:-26:0.447
chr15	31489776	31489908	reg1015196.p1	8.848	+	GQ502181 HM135791 NM_001252020	-36414	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-95925	-	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	-206075	-	NM_001243538	33207	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	129496	+	AJ430383 NM_130901	457699	-	GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10##NM_001243538|LOC283710|283710|uncharacterized LOC283710##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A	0.105348	
chr18	46568400	46568534	reg1016616.p1	8.848	+	AF010193 NM_001190821 NM_005904	-91387	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	-91700	-	AK301535 NM_001190822	-92765	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	418584	-	TSC_hg19_v1_chr18_-_47013575 AB097012	445098	-	TSC_hg19_v1_chr18_-_47013599 BC093004	445132	-	AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin##AB097012|C18orf32|497661|chromosome 18 open reading frame 32##BC093004|C18orf32|497661|chromosome 18 open reading frame 32	0.67618	CTCF.p2:8:0.676
chr12	108888866	108889008	reg1016016.p1	8.847	+	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	-155853	-	NM_001142345	-174499	-	BC110330 AB018332 NM_014653	-365450	+	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	20145	+	AB385287 D63879 TSC_hg19_v1_chr12_-_108954936 BC103706 BC093784 BC111983 BC143253 BC004547 BC024279 AB020880 AF387506 BC032601	65997	-	TSC_hg19_v1_chr12_-_108954945 AK225174 AK304834	66009	-	U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing##D63879|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC103706|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC093784|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC111983|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC143253|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC004547|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC024279|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AB020880|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AF387506|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC032601|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK225174|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK304834|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3	0.998684	CTCF.p2:-3:0.999
chr2	44619632	44619720	reg1011273.p1	8.847	+	NM_024766 TSC_hg19_v1_chr2_+_44589085 BC029359 AK027104 BC053733	-30584	+	AK131463 NM_001171603 NM_001171617	-30705	-	AB007896 TSC_hg19_v1_chr2_-_44588634 BC151236 AK025649 NM_001171606 NM_001171613	-30996	-	AJ012611 NM_005413 AL162671	549370	+	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	616874	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	1175452	-	NM_024766|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC029359|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK027104|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC053733|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK131463|PREPL|9581|prolyl endopeptidase-like##NM_001171603|PREPL|9581|prolyl endopeptidase-like##NM_001171617|PREPL|9581|prolyl endopeptidase-like##AB007896|PREPL|9581|prolyl endopeptidase-like##BC151236|PREPL|9581|prolyl endopeptidase-like##AK025649|PREPL|9581|prolyl endopeptidase-like##NM_001171606|PREPL|9581|prolyl endopeptidase-like##NM_001171613|PREPL|9581|prolyl endopeptidase-like##AJ012611|SIX3|6496|SIX homeobox 3##NM_005413|SIX3|6496|SIX homeobox 3##AL162671|SIX3|6496|SIX homeobox 3##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1	0.993452	CTCF.p2:10:0.993
chr17	43361645	43361756	reg1014284.p1	8.846	+	BC028124 AF433663 AK302184 AK058143 NM_152343	-22245	-	TSC_hg19_v1_chr17_+_43325300 AK311429	-36396	+	AK096807 TSC_hg19_v1_chr17_-_43319268	-42504	-	TSC_hg19_v1_chr17_-_43394387 BC035576 BC022296 AK290203 AK313085 NM_003954	32675	-	TSC_hg19_v1_chr17_-_43487753 AK092891 AX747793 AK300880	126050	-	TSC_hg19_v1_chr17_-_43503000 AK125535 NM_199282	141301	-	BC028124|C17orf46|124783|chromosome 17 open reading frame 46##AF433663|C17orf46|124783|chromosome 17 open reading frame 46##AK302184|C17orf46|124783|chromosome 17 open reading frame 46##AK058143|C17orf46|124783|chromosome 17 open reading frame 46##NM_152343|C17orf46|124783|chromosome 17 open reading frame 46##AK311429|LOC100133991|100133991|uncharacterized LOC100133991##BC035576|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC022296|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK290203|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK313085|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##NM_003954|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK092891|ARHGAP27|201176|Rho GTPase activating protein 27##AK300880|ARHGAP27|201176|Rho GTPase activating protein 27##AK125535|ARHGAP27|201176|Rho GTPase activating protein 27##NM_199282|ARHGAP27|201176|Rho GTPase activating protein 27	0.982094	CTCF.p2:6:0.982
chr2	135218234	135218340	reg1012830.p1	8.846	+	NM_002410 D17716 AF113921	-206402	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-892249	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-1038933	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	258269	-	AK125008 NM_138326 BC016018 BC107420 AB071418	377931	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	458110	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.029709	
chr22	24110601	24110716	reg1014472.p1	8.846	+	TSC_hg19_v1_chr22_-_24110129 BC053570 AK289560 BC065232 NM_213720	-546	-	AK093880 AX748349 NM_182520	-5451	+	CU013206 CU013494 DQ893106 DQ896379 CR456610 AK312098 AF163825 AY359000 NM_013378 BC020666	-14056	-	AK075448 AK129792 NM_005940 X57766 BC057788	4387	+	TSC_hg19_v1_chr22_+_24129164 AK024025 NM_001007468 NM_003073 AK303620 AK021419 AK299411 AJ011737 AJ011738 U04847 BC117114 BC143667 CR456581 AL389878 AB463295 CU013180 CU013468 HQ258224 AB017523	18591	+	AB528119 CU013077 CU013365 CU691264 TSC_hg19_v1_chr22_-_24181194 AK096976 AK125830 BC057830 CR456372 AL389876 NM_001002862 NM_001135751 NM_198440	70527	-	BC053570|CHCHD10|400916|coiled-coil-helix-coiled-coil-helix domain containing 10##AK289560|CHCHD10|400916|coiled-coil-helix-coiled-coil-helix domain containing 10##BC065232|CHCHD10|400916|coiled-coil-helix-coiled-coil-helix domain containing 10##NM_213720|CHCHD10|400916|coiled-coil-helix-coiled-coil-helix domain containing 10##AK093880|C22orf15|150248|chromosome 22 open reading frame 15##NM_182520|C22orf15|150248|chromosome 22 open reading frame 15##CU013206|VPREB3|29802|pre-B lymphocyte 3##CU013494|VPREB3|29802|pre-B lymphocyte 3##DQ893106|VPREB3|29802|pre-B lymphocyte 3##DQ896379|VPREB3|29802|pre-B lymphocyte 3##CR456610|VPREB3|29802|pre-B lymphocyte 3##AK312098|VPREB3|29802|pre-B lymphocyte 3##AF163825|VPREB3|29802|pre-B lymphocyte 3##AY359000|VPREB3|29802|pre-B lymphocyte 3##NM_013378|VPREB3|29802|pre-B lymphocyte 3##BC020666|VPREB3|29802|pre-B lymphocyte 3##AK075448|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##AK129792|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##NM_005940|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##X57766|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##BC057788|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##AK024025|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##NM_001007468|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##NM_003073|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK303620|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK021419|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK299411|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AJ011737|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AJ011738|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##BC117114|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##BC143667|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CR456581|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AL389878|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CU013180|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CU013468|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##HQ258224|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AB017523|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CU013077|DERL3|91319|Der1-like domain family, member 3##CU013365|DERL3|91319|Der1-like domain family, member 3##AK096976|DERL3|91319|Der1-like domain family, member 3##AK125830|DERL3|91319|Der1-like domain family, member 3##BC057830|DERL3|91319|Der1-like domain family, member 3##CR456372|DERL3|91319|Der1-like domain family, member 3##AL389876|DERL3|91319|Der1-like domain family, member 3##NM_001002862|DERL3|91319|Der1-like domain family, member 3##NM_001135751|DERL3|91319|Der1-like domain family, member 3##NM_198440|DERL3|91319|Der1-like domain family, member 3	0.548906	CTCF.p2:11:0.549
chr2	37642757	37642888	reg1000118.p3	8.846	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-71009	+	BC030706 BC012820 AB015982 NM_005813	-98629	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-183976	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	255957	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	256567	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	509610	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.723925	CTCF.p2:-9:0.724
chr4	122198854	122198961	reg1015961.p1	8.846	+	AK303192 NM_001244764	-50287	-	AK301058 NM_001128843	-61126	-	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	-113423	-	TSC_hg19_v1_chr4_-_122302115 NM_198179 AK309337	103255	-	BC012804 BC012822 TSC_hg19_v1_chr4_-_122618109 BC004993 X12454 D00172 M21731	419205	-	TSC_hg19_v1_chr4_-_122618136 AK297909 M19384 BC018671 BC032093	419226	-	AK303192|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3##AK301058|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3##AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3##NM_198179|QRFPR|84109|pyroglutamylated RFamide peptide receptor##AK309337|QRFPR|84109|pyroglutamylated RFamide peptide receptor##BC012804|ANXA5|308|annexin A5##BC012822|ANXA5|308|annexin A5##BC004993|ANXA5|308|annexin A5##X12454|ANXA5|308|annexin A5##D00172|ANXA5|308|annexin A5##M21731|ANXA5|308|annexin A5##AK297909|ANXA5|308|annexin A5##M19384|ANXA5|308|annexin A5##BC018671|ANXA5|308|annexin A5##BC032093|ANXA5|308|annexin A5	0.031801	
chr13	31553625	31553720	reg1012563.p1	8.845	+	TSC_hg19_v1_chr13_+_31506809 BC030277 NM_152325 CU688876	-46842	+	NM_032849 AK055635 TSC_hg19_v1_chr13_+_31480407 AL832478 BC040165 BC101624 BC101626 CU691826	-73192	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	-243957	+	CU691504 DQ891727 DQ894904 AF039695 TSC_hg19_v1_chr13_-_31735849	182122	-	AB003333 TSC_hg19_v1_chr13_-_31736042 BC037553 AB003334 D86956 BC018124 AK314576 AK293955 NM_006644 AK302294 AK303029 AK311464 AK307597	182431	-	TSC_hg19_v1_chr13_+_31774111 NM_194318	220431	+	BC030277|C13orf26|122046|chromosome 13 open reading frame 26##NM_152325|C13orf26|122046|chromosome 13 open reading frame 26##NM_032849|C13orf33|84935|chromosome 13 open reading frame 33##AK055635|C13orf33|84935|chromosome 13 open reading frame 33##BC040165|C13orf33|84935|chromosome 13 open reading frame 33##BC101624|C13orf33|84935|chromosome 13 open reading frame 33##BC101626|C13orf33|84935|chromosome 13 open reading frame 33##BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891727|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ894904|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AF039695|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AB003333|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC037553|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AB003334|HSPH1|10808|heat shock 105kDa/110kDa protein 1##D86956|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC018124|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK314576|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK293955|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_006644|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK302294|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK303029|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK311464|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK307597|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like	0.99281	CTCF.p2:4:0.993
chr2	70529203	70529320	reg1014904.p1	8.845	+	AM393139 AB528755 AK225148 BC026293 TSC_hg19_v1_chr2_-_70529198 AL833147 BC014975 AK225151 AK309543 AK315877 AK027574 NM_032822	-55	-	TSC_hg19_v1_chr2_-_70520848 X85373 BC022432 NM_003096 BC106055	-8396	-	CR456918 AB464221 BC071880 TSC_hg19_v1_chr2_-_70520827 BC070166 BC066302 BC000070	-8450	-	AK309220 AK309066 CU675103 BT006833 AF149096 AF149097 AF149098 X70340 K03222 M31172 AK290151 AK312899 BC005308 TSC_hg19_v1_chr2_-_70780995	251547	-	NM_001099691 NM_003236	251885	-	BC065525 NM_001185054	465585	-	AM393139|FAM136A|84908|family with sequence similarity 136, member A##AK225148|FAM136A|84908|family with sequence similarity 136, member A##BC026293|FAM136A|84908|family with sequence similarity 136, member A##AL833147|FAM136A|84908|family with sequence similarity 136, member A##BC014975|FAM136A|84908|family with sequence similarity 136, member A##AK225151|FAM136A|84908|family with sequence similarity 136, member A##AK309543|FAM136A|84908|family with sequence similarity 136, member A##AK315877|FAM136A|84908|family with sequence similarity 136, member A##AK027574|FAM136A|84908|family with sequence similarity 136, member A##NM_032822|FAM136A|84908|family with sequence similarity 136, member A##X85373|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC022432|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##NM_003096|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC106055|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##CR456918|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC071880|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC070166|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC066302|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC000070|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##AK309220|TGFA|7039|transforming growth factor, alpha##AK309066|TGFA|7039|transforming growth factor, alpha##BT006833|TGFA|7039|transforming growth factor, alpha##AF149096|TGFA|7039|transforming growth factor, alpha##AF149097|TGFA|7039|transforming growth factor, alpha##AF149098|TGFA|7039|transforming growth factor, alpha##X70340|TGFA|7039|transforming growth factor, alpha##K03222|TGFA|7039|transforming growth factor, alpha##M31172|TGFA|7039|transforming growth factor, alpha##AK290151|TGFA|7039|transforming growth factor, alpha##AK312899|TGFA|7039|transforming growth factor, alpha##BC005308|TGFA|7039|transforming growth factor, alpha##NM_001099691|TGFA|7039|transforming growth factor, alpha##NM_003236|TGFA|7039|transforming growth factor, alpha##BC065525|ADD2|119|adducin 2 (beta)##NM_001185054|ADD2|119|adducin 2 (beta)	0.796526	CTCF.p2:7:0.797
chr5	76814284	76814419	reg1014821.p1	8.845	+	TSC_hg19_v1_chr5_-_76788333 AK001766 BC001807 NM_018268	-26036	-	AK296423 AK300058 TSC_hg19_v1_chr5_-_76788142 AK021855	-26206	-	TSC_hg19_v1_chr5_-_76788048 AK293316 AK295249 CU691838 AK304329 AK023977 AF115511 BC040241	-26285	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	120078	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	120163	-	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	257781	-	AK001766|WDR41|55255|WD repeat domain 41##BC001807|WDR41|55255|WD repeat domain 41##NM_018268|WDR41|55255|WD repeat domain 41##AK296423|WDR41|55255|WD repeat domain 41##AK300058|WDR41|55255|WD repeat domain 41##AK021855|WDR41|55255|WD repeat domain 41##AK293316|WDR41|55255|WD repeat domain 41##AK295249|WDR41|55255|WD repeat domain 41##AK304329|WDR41|55255|WD repeat domain 41##AK023977|WDR41|55255|WD repeat domain 41##AF115511|WDR41|55255|WD repeat domain 41##BC040241|WDR41|55255|WD repeat domain 41##EU446696|OTP|23440|orthopedia homeobox##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A	0.268379	CTCF.p2:-1:0.268
chr11	65097507	65097645	reg1016433.p1	8.844	+	NM_006779 TSC_hg19_v1_chr11_+_65082336 AF001436 AF163840 AK315444 BC075834	-15239	+	TSC_hg19_v1_chr11_+_65029432 AK309284 BC001347 BC002990 BC018813 BC018814 NM_002689 AK297842 AK307831 AK025315	-68170	+	AK131327 NM_001004326 BC146850	-116262	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	3708	+	TSC_hg19_v1_chr11_+_65101347 BC014889 AK291944 U94585 AB463002 BT006718 DQ892397 DQ895612	3775	+	NM_145719	24705	+	NM_006779|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF001436|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF163840|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AK315444|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##BC075834|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AK309284|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC001347|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC002990|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018813|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018814|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_002689|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK297842|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK307831|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK025315|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK131327|SLC22A20|440044|solute carrier family 22, member 20##NM_001004326|SLC22A20|440044|solute carrier family 22, member 20##BC146850|SLC22A20|440044|solute carrier family 22, member 20##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2##BC014889|DPF2|5977|D4, zinc and double PHD fingers family 2##AK291944|DPF2|5977|D4, zinc and double PHD fingers family 2##U94585|DPF2|5977|D4, zinc and double PHD fingers family 2##BT006718|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ892397|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ895612|DPF2|5977|D4, zinc and double PHD fingers family 2##NM_145719|TIGD3|220359|tigger transposable element derived 3	0.997606	CTCF.p2:-4:0.998
chr1	200249038	200249167	reg1014622.p1	8.844	+	NM_001105517	-66447	+	AK316513 TSC_hg19_v1_chr1_+_200011716	-237378	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	-252233	+	AK021707 TSC_hg19_v1_chr1_-_200377270	128167	-	TSC_hg19_v1_chr1_-_200377488 AK022921	128436	-	AB384788 CU687444 AF125158 BC051905 TSC_hg19_v1_chr1_-_200378976	129807	-	NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK021707|ZNF281|23528|zinc finger protein 281##AK022921|ZNF281|23528|zinc finger protein 281##AF125158|ZNF281|23528|zinc finger protein 281##BC051905|ZNF281|23528|zinc finger protein 281	0.994436	CTCF.p2:3:0.994
chr20	4739922	4740027	reg1014713.p1	8.844	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	-37440	+	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	-72998	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	-510384	-	AY154472 NM_170774	55794	-	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	64220	-	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	242186	-	AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	0.869245	CTCF.p2:-15:0.869
chr6	134159017	134159127	reg1014209.p1	8.844	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	-596540	+	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	-596581	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	-1023353	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	51182	+	TSC_hg19_v1_chr6_+_134210277 AF035718 AF047419 BC025697	51198	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	114292	+	BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)##AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21##AF035718|TCF21|6943|transcription factor 21##AF047419|TCF21|6943|transcription factor 21##BC025697|TCF21|6943|transcription factor 21##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1	0.985882	CTCF.p2:5:0.986
chr9	136858147	136858291	reg1000028.p2	8.844	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	-773	-	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-253233	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-254741	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	74974	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	75407	-	NM_017588 TSC_hg19_v1_chr9_+_137001212	142991	+	BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3##NM_017588|WDR5|11091|WD repeat domain 5	0.012797	
chr10	105840653	105840757	reg1013421.p2	8.843	+	AF273048 NM_014720 BC111565 BC008697	-113218	+	TSC_hg19_v1_chr10_+_105726941 BC047885 BC064804 BC047762 BC036736 D86959	-113741	+	TSC_hg19_v1_chr10_+_105726926 AK307389	-113819	+	AK300117 TSC_hg19_v1_chr10_-_105845560 M91669 AK300226 AK309940	4864	-	BC004478 D63465 TSC_hg19_v1_chr10_-_105845639 NM_000494	4924	-	NM_145247 BC140835 NM_001002759 BC043256 AK291184	41204	+	AF273048|SLK|9748|STE20-like kinase##NM_014720|SLK|9748|STE20-like kinase##BC111565|SLK|9748|STE20-like kinase##BC008697|SLK|9748|STE20-like kinase##BC047885|SLK|9748|STE20-like kinase##BC064804|SLK|9748|STE20-like kinase##BC047762|SLK|9748|STE20-like kinase##BC036736|SLK|9748|STE20-like kinase##D86959|SLK|9748|STE20-like kinase##AK307389|SLK|9748|STE20-like kinase##M91669|COL17A1|1308|collagen, type XVII, alpha 1##AK309940|COL17A1|1308|collagen, type XVII, alpha 1##BC004478|COL17A1|1308|collagen, type XVII, alpha 1##D63465|COL17A1|1308|collagen, type XVII, alpha 1##NM_000494|COL17A1|1308|collagen, type XVII, alpha 1##NM_145247|SFR1|119392|SWI5-dependent recombination repair 1##BC140835|SFR1|119392|SWI5-dependent recombination repair 1##NM_001002759|SFR1|119392|SWI5-dependent recombination repair 1##BC043256|SFR1|119392|SWI5-dependent recombination repair 1##AK291184|SFR1|119392|SWI5-dependent recombination repair 1	0.89484	CTCF.p2:-3:0.895
chr16	16221622	16221724	reg1011844.p1	8.843	+	TSC_hg19_v1_chr16_+_16146613 HQ917065	-75055	+	TSC_hg19_v1_chr16_+_16043442 L05628 NM_004996 NM_019862 NM_019898 NM_019899 NM_019900 X78338	-178309	+	AL832498 TSC_hg19_v1_chr16_-_15982471	-239188	-	AF168791 AM711638 AM774324 BC050733 AF076622 BC131732 U66689 NM_001079528 NM_001171 AY078405 AK298295	95647	-	TSC_hg19_v1_chr16_+_16326401 NM_001004067	104724	+	TSC_hg19_v1_chr16_+_16326457 AL832855	104782	+	L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##AL832498|FOPNL|123811|FGFR1OP N-terminal like##AF168791|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM711638|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM774324|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC050733|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AF076622|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC131732|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001079528|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001171|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AY078405|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AK298295|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001004067|NOMO3|408050|NODAL modulator 3##AL832855|NOMO2|283820|NODAL modulator 2	0.014635	
chr3	51009000	51009120	reg1014935.p1	8.843	+	AY254099 NM_004947 AY145303	-296378	+	TSC_hg19_v1_chr3_+_50654932 AK313565 U43784 AB528893 EU832627 EU832702 CU675717 AB451303 AB451434	-354128	+	BC001662 BC010407 TSC_hg19_v1_chr3_+_50654611 BC007591 U09578	-354433	+	NM_006010 TSC_hg19_v1_chr3_+_51422691	413631	+	TSC_hg19_v1_chr3_+_51422721 BC113588 BC113590 AK292243 BC007282 BT007110 EU832655 EU832733 BC033055	413721	+	NM_013286 TSC_hg19_v1_chr3_+_51428706	419642	+	AY254099|DOCK3|1795|dedicator of cytokinesis 3##NM_004947|DOCK3|1795|dedicator of cytokinesis 3##AY145303|DOCK3|1795|dedicator of cytokinesis 3##AK313565|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U43784|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832627|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832702|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451303|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451434|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC001662|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC010407|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC007591|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U09578|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##NM_006010|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113588|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113590|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AK292243|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC007282|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BT007110|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832655|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832733|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC033055|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##NM_013286|RBM15B|29890|RNA binding motif protein 15B	0.983775	CTCF.p2:4:0.984
chr2	183844878	183845007	reg1014357.p1	8.842	+	BT019883 DQ890944 DQ894106 AK130009 U68057 U91903 BC027855 AK312741 U24163 NM_001463	-113554	-	TSC_hg19_v1_chr2_+_183608333 AK074905	-236592	+	TSC_hg19_v1_chr2_+_183582683 BC107425 AF314529 AY089971 HQ258514 HQ258651 AL832646 AK027450	-262195	+	TSC_hg19_v1_chr2_-_183903062 BT007033 AB383914 DQ893545 DQ893809 AB014509 AK292914 BC015025	58042	-	TSC_hg19_v1_chr2_-_183903230 NM_013436 NM_205842	58302	-	AB063186 AB063187 NM_001142314 NM_080876	98344	+	BT019883|FRZB|2487|frizzled-related protein##DQ890944|FRZB|2487|frizzled-related protein##DQ894106|FRZB|2487|frizzled-related protein##AK130009|FRZB|2487|frizzled-related protein##U68057|FRZB|2487|frizzled-related protein##U91903|FRZB|2487|frizzled-related protein##BC027855|FRZB|2487|frizzled-related protein##AK312741|FRZB|2487|frizzled-related protein##U24163|FRZB|2487|frizzled-related protein##NM_001463|FRZB|2487|frizzled-related protein##AK074905|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC107425|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF314529|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY089971|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258514|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258651|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832646|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027450|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BT007033|NCKAP1|10787|NCK-associated protein 1##DQ893545|NCKAP1|10787|NCK-associated protein 1##DQ893809|NCKAP1|10787|NCK-associated protein 1##AB014509|NCKAP1|10787|NCK-associated protein 1##AK292914|NCKAP1|10787|NCK-associated protein 1##BC015025|NCKAP1|10787|NCK-associated protein 1##NM_013436|NCKAP1|10787|NCK-associated protein 1##NM_205842|NCKAP1|10787|NCK-associated protein 1##AB063186|DUSP19|142679|dual specificity phosphatase 19##AB063187|DUSP19|142679|dual specificity phosphatase 19##NM_001142314|DUSP19|142679|dual specificity phosphatase 19##NM_080876|DUSP19|142679|dual specificity phosphatase 19	0.971172	CTCF.p2:22:0.971
chr4	144942888	144943005	reg1016083.p1	8.842	+	AY509882 AY509883 AY950609 AY950610 AY950611 AY950612 U05255 J02982 BC121077 BC121078 EU338223 EU338224 EU338225 EU338226 EU338227 EU338228 EU338229 EU338230 EU338235 EU338236 EU338237 EU338238 BC069310 X08055 NM_002100	-2479	-	EU176664 BC064396 BC017864 M29610 NM_002102 NM_198682	-116259	-	NM_001168235	-321119	-	AY950614 DQ893046 L07251 L07253 S77893 U00177 U00178 U00179 X57023 M12857 M36281 X51798 BC013328 EU338231 EU338232 EU338233 EU338234 L31860 X08054 BC005319 AK290561 NM_002099	118899	-	NM_022475 AY009951 TSC_hg19_v1_chr4_+_145567307 AY009317 BC025311 BC015636 BC009298	624302	+	NM_001040876 NM_002940	1076209	+	AY509882|GYPB|2994|glycophorin B (MNS blood group)##AY509883|GYPB|2994|glycophorin B (MNS blood group)##AY950609|GYPB|2994|glycophorin B (MNS blood group)##AY950610|GYPB|2994|glycophorin B (MNS blood group)##AY950611|GYPB|2994|glycophorin B (MNS blood group)##U05255|GYPB|2994|glycophorin B (MNS blood group)##J02982|GYPB|2994|glycophorin B (MNS blood group)##BC121077|GYPB|2994|glycophorin B (MNS blood group)##BC121078|GYPB|2994|glycophorin B (MNS blood group)##EU338223|GYPB|2994|glycophorin B (MNS blood group)##EU338224|GYPB|2994|glycophorin B (MNS blood group)##EU338225|GYPB|2994|glycophorin B (MNS blood group)##EU338226|GYPB|2994|glycophorin B (MNS blood group)##EU338227|GYPB|2994|glycophorin B (MNS blood group)##EU338228|GYPB|2994|glycophorin B (MNS blood group)##EU338229|GYPB|2994|glycophorin B (MNS blood group)##EU338230|GYPB|2994|glycophorin B (MNS blood group)##EU338235|GYPB|2994|glycophorin B (MNS blood group)##EU338236|GYPB|2994|glycophorin B (MNS blood group)##EU338237|GYPB|2994|glycophorin B (MNS blood group)##EU338238|GYPB|2994|glycophorin B (MNS blood group)##BC069310|GYPB|2994|glycophorin B (MNS blood group)##X08055|GYPB|2994|glycophorin B (MNS blood group)##NM_002100|GYPB|2994|glycophorin B (MNS blood group)##EU176664|GYPE|2996|glycophorin E (MNS blood group)##BC064396|GYPE|2996|glycophorin E (MNS blood group)##BC017864|GYPE|2996|glycophorin E (MNS blood group)##M29610|GYPE|2996|glycophorin E (MNS blood group)##NM_002102|GYPE|2996|glycophorin E (MNS blood group)##NM_198682|GYPE|2996|glycophorin E (MNS blood group)##NM_001168235|FREM3|166752|FRAS1 related extracellular matrix 3##AY950614|GYPA|2993|glycophorin A (MNS blood group)##DQ893046|GYPA|2993|glycophorin A (MNS blood group)##L07251|GYPA|2993|glycophorin A (MNS blood group)##L07253|GYPA|2993|glycophorin A (MNS blood group)##U00177|GYPA|2993|glycophorin A (MNS blood group)##U00178|GYPA|2993|glycophorin A (MNS blood group)##U00179|GYPA|2993|glycophorin A (MNS blood group)##X57023|GYPA|2993|glycophorin A (MNS blood group)##M12857|GYPA|2993|glycophorin A (MNS blood group)##M36281|GYPA|2993|glycophorin A (MNS blood group)##X51798|GYPA|2993|glycophorin A (MNS blood group)##BC013328|GYPA|2993|glycophorin A (MNS blood group)##EU338231|GYPA|2993|glycophorin A (MNS blood group)##EU338232|GYPA|2993|glycophorin A (MNS blood group)##EU338233|GYPA|2993|glycophorin A (MNS blood group)##EU338234|GYPA|2993|glycophorin A (MNS blood group)##L31860|GYPA|2993|glycophorin A (MNS blood group)##X08054|GYPA|2993|glycophorin A (MNS blood group)##BC005319|GYPA|2993|glycophorin A (MNS blood group)##AK290561|GYPA|2993|glycophorin A (MNS blood group)##NM_002099|GYPA|2993|glycophorin A (MNS blood group)##NM_022475|HHIP|64399|hedgehog interacting protein##AY009951|HHIP|64399|hedgehog interacting protein##AY009317|HHIP|64399|hedgehog interacting protein##BC025311|HHIP|64399|hedgehog interacting protein##BC015636|HHIP|64399|hedgehog interacting protein##BC009298|HHIP|64399|hedgehog interacting protein##NM_001040876|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##NM_002940|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1	0.988039	CTCF.p2:-3:0.988
chr4	42867745	42867849	reg1013115.p2	8.842	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	-208709	-	NM_001080505	-467942	+	AB126828 AB126829 NM_001159547 NM_207406	-712903	-	AB528853 NM_001080476	27484	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	1582756	-	AK123347 NM_198353	1583026	-	BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8	0.997406	CTCF.p2:3:0.997
chr6	112364328	112364476	reg1013198.p1	8.842	+	TSC_hg19_v1_chr6_-_112194648 NM_002037	-169747	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	-169867	-	BC032496 NM_153048	-284094	-	BC012028 NM_003880 BC035250 NM_198239 BC105940 BC105941 AY358349 AF100781 AY358350 AB075040	11015	+	AF201334 CU689114 CU692994 DQ891503 DQ894695 BC025405 TSC_hg19_v1_chr6_-_112408705 BC031101 AK026242 NM_016262	44303	-	NM_001033564 TSC_hg19_v1_chr6_+_112408818 BC044912 AL049461	44379	+	NM_002037|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3##AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF201334|TUBE1|51175|tubulin, epsilon 1##DQ891503|TUBE1|51175|tubulin, epsilon 1##DQ894695|TUBE1|51175|tubulin, epsilon 1##BC025405|TUBE1|51175|tubulin, epsilon 1##BC031101|TUBE1|51175|tubulin, epsilon 1##AK026242|TUBE1|51175|tubulin, epsilon 1##NM_016262|TUBE1|51175|tubulin, epsilon 1##NM_001033564|C6orf225|619208|chromosome 6 open reading frame 225##BC044912|C6orf225|619208|chromosome 6 open reading frame 225##AL049461|C6orf225|619208|chromosome 6 open reading frame 225	0.999203	CTCF.p2:-9:0.999
chr6	40792177	40792285	reg1016276.p1	8.842	+	BC142616 AB033072 NM_020737 AK291474	-237087	-	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-890017	-	AB527188 AJ224328 NM_005943	-896846	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	214718	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	218115	+	AK223461 AK308197 AK310006 AK313288 NM_006789 BC047767 AF161698 BC069688 BC069764 AK300689	228768	+	BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2##AK223461|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK308197|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK310006|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK313288|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##NM_006789|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC047767|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AF161698|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069688|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069764|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK300689|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2	0.996138	CTCF.p2:0:0.996
chr7	56394995	56395095	reg1013214.p1	8.842	+	Y10275 TSC_hg19_v1_chr7_-_56184079 BC043523 NM_001145712	-211002	-	TSC_hg19_v1_chr7_-_56174186 NM_016139	-220844	-	TSC_hg19_v1_chr7_-_56174151 AF078845	-220886	-	AF277624 NM_033273	812525	-	AK131575 NM_001159279	1114837	+	NM_001159522	7110775	+	BC043523|LOC389493|389493|uncharacterized protein LOC389493##NM_001145712|LOC389493|389493|uncharacterized protein LOC389493##NM_016139|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##AF078845|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##AF277624|ZNF479|90827|zinc finger protein 479##NM_033273|ZNF479|90827|zinc finger protein 479##AK131575|ZNF716|441234|zinc finger protein 716##NM_001159279|ZNF716|441234|zinc finger protein 716##NM_001159522|ZNF727|442319|zinc finger protein 727	0.890931	CTCF.p2:0:0.891
chr1	62548541	62548652	reg1015859.p1	8.841	+	TSC_hg19_v1_chr1_+_62208151 AJ001306 AJ224747 AJ224748 NM_176877 AK307713 AK308428 BC142661 BC142723	-340446	+	AF353990 NM_032027	-357502	-	TSC_hg19_v1_chr1_-_62190806 BC048995 BC029486	-357777	-	NM_001164835 NM_019079 BC012555 BC060808 AB211065 AL834314 AK001973 BC111559	111920	+	AK091941 AX747268 TSC_hg19_v1_chr1_-_62785028	236403	-	TSC_hg19_v1_chr1_-_62785084 AB284127 BC060866 NM_181712	236483	-	AJ001306|INADL|10207|InaD-like (Drosophila)##AJ224747|INADL|10207|InaD-like (Drosophila)##AJ224748|INADL|10207|InaD-like (Drosophila)##NM_176877|INADL|10207|InaD-like (Drosophila)##AK307713|INADL|10207|InaD-like (Drosophila)##AK308428|INADL|10207|InaD-like (Drosophila)##BC142661|INADL|10207|InaD-like (Drosophila)##BC142723|INADL|10207|InaD-like (Drosophila)##AF353990|TM2D1|83941|TM2 domain containing 1##NM_032027|TM2D1|83941|TM2 domain containing 1##BC048995|TM2D1|83941|TM2 domain containing 1##BC029486|TM2D1|83941|TM2 domain containing 1##NM_001164835|L1TD1|54596|LINE-1 type transposase domain containing 1##NM_019079|L1TD1|54596|LINE-1 type transposase domain containing 1##BC012555|L1TD1|54596|LINE-1 type transposase domain containing 1##BC060808|L1TD1|54596|LINE-1 type transposase domain containing 1##AB211065|L1TD1|54596|LINE-1 type transposase domain containing 1##AL834314|L1TD1|54596|LINE-1 type transposase domain containing 1##AK001973|L1TD1|54596|LINE-1 type transposase domain containing 1##BC111559|L1TD1|54596|LINE-1 type transposase domain containing 1##AK091941|KANK4|163782|KN motif and ankyrin repeat domains 4##AB284127|KANK4|163782|KN motif and ankyrin repeat domains 4##BC060866|KANK4|163782|KN motif and ankyrin repeat domains 4##NM_181712|KANK4|163782|KN motif and ankyrin repeat domains 4	0.992866	CTCF.p2:0:0.993
chr21	30118122	30118259	reg1006328.p2	8.841	+	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	-1778751	-	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	-1900478	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	-1900719	-	TSC_hg19_v1_chr21_-_30257688 AB590951 BC011554 AK314100 AK225515 AF139682 NM_013240 NM_182749	139473	-	BC007525 AB384515 TSC_hg19_v1_chr21_-_30365185 AF161350 AB018257 BC150284 AB621822 BC029371 BC140790 AK001915 BC031633 NM_015565	247003	-	CU676110 TSC_hg19_v1_chr21_-_30391645 AF212232 BC012546 Y19009 BC017912 AK000056 AL355727 NM_016940 AK223357	273457	-	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##BC007525|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF161350|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AB018257|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC150284|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC029371|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC140790|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AK001915|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC031633|LTN1|26046|listerin E3 ubiquitin protein ligase 1##NM_015565|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF212232|RWDD2B|10069|RWD domain containing 2B##BC012546|RWDD2B|10069|RWD domain containing 2B##Y19009|RWDD2B|10069|RWD domain containing 2B##BC017912|RWDD2B|10069|RWD domain containing 2B##AK000056|RWDD2B|10069|RWD domain containing 2B##AL355727|RWDD2B|10069|RWD domain containing 2B##NM_016940|RWDD2B|10069|RWD domain containing 2B##AK223357|RWDD2B|10069|RWD domain containing 2B	0.971751	CTCF.p2:17:0.972
chr1	10555204	10555384	reg1008379.p2	8.840	+	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-20283	+	TSC_hg19_v1_chr1_-_10532605 NM_004401 NM_213566	-22672	-	TSC_hg19_v1_chr1_-_10532555 AB590590 BT006980 CU675773 BC000037 AF103799 AF087573 BC007721 AK313317 AK222546 U91985 BC007112	-22739	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	199257	-	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	301411	-	NM_001170754	486799	-	AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_004401|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##NM_213566|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BT006980|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC000037|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF103799|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF087573|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007721|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK313317|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK222546|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##U91985|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007112|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127	0.185868	
chr16	28082168	28082289	reg1014876.p1	8.840	+	TSC_hg19_v1_chr16_-_28074776 AY358206 NM_001109763	-7426	-	BC016460 NM_144675	-182751	-	TSC_hg19_v1_chr16_+_27561464 NM_015202 AB011128 BC150276 BC131508	-520764	+	AY026388 BC130304 BC144189 TSC_hg19_v1_chr16_-_28222816 AK123846	140557	-	TSC_hg19_v1_chr16_-_28223181 AB002368 NM_015171	140947	-	TSC_hg19_v1_chr16_-_28303389 AK091456 AX746995	221150	-	AY358206|GSG1L|146395|GSG1-like##NM_001109763|GSG1L|146395|GSG1-like##BC016460|GSG1L|146395|GSG1-like##NM_144675|GSG1L|146395|GSG1-like##NM_015202|KIAA0556|23247|KIAA0556##AB011128|KIAA0556|23247|KIAA0556##BC150276|KIAA0556|23247|KIAA0556##BC131508|KIAA0556|23247|KIAA0556##AY026388|XPO6|23214|exportin 6##BC130304|XPO6|23214|exportin 6##BC144189|XPO6|23214|exportin 6##AK123846|XPO6|23214|exportin 6##AB002368|XPO6|23214|exportin 6##NM_015171|XPO6|23214|exportin 6	0.526563	CTCF.p2:1:0.362
chr11	518755	518904	reg1014085.p1	8.837	+	TSC_hg19_v1_chr11_-_507243 NM_203386 NM_203387 NM_203388 NM_203389	-11564	-	TSC_hg19_v1_chr11_-_507225 BC003075 BC000677 BC014629 AK310173 BC011500 M22414	-11625	-	AK311379 TSC_hg19_v1_chr11_-_506769 BC003506 BC024037 AK308340 M36717 X13973 BC047730 NM_002939 NM_203383 NM_203384 NM_203385	-12049	-	TSC_hg19_v1_chr11_-_535567 BC006499 NM_001130442 NM_005343 NM_176795	16734	-	NM_198075 TSC_hg19_v1_chr11_+_537526 BC035936 BC035937	18697	+	TSC_hg19_v1_chr11_-_560721 BC039077 NM_173573	41913	-	NM_203386|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203387|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203388|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203389|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC000677|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC014629|RNH1|6050|ribonuclease/angiogenin inhibitor 1##AK310173|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC011500|RNH1|6050|ribonuclease/angiogenin inhibitor 1##M22414|RNH1|6050|ribonuclease/angiogenin inhibitor 1##AK311379|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC003506|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC024037|RNH1|6050|ribonuclease/angiogenin inhibitor 1##AK308340|RNH1|6050|ribonuclease/angiogenin inhibitor 1##M36717|RNH1|6050|ribonuclease/angiogenin inhibitor 1##X13973|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC047730|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_002939|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203383|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203384|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203385|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC006499|HRAS|3265|v-Ha-ras Harvey rat sarcoma viral oncogene homolog##NM_001130442|HRAS|3265|v-Ha-ras Harvey rat sarcoma viral oncogene homolog##NM_005343|HRAS|3265|v-Ha-ras Harvey rat sarcoma viral oncogene homolog##NM_176795|HRAS|3265|v-Ha-ras Harvey rat sarcoma viral oncogene homolog##NM_198075|LRRC56|115399|leucine rich repeat containing 56##BC035936|LRRC56|115399|leucine rich repeat containing 56##BC035937|LRRC56|115399|leucine rich repeat containing 56##BC039077|C11orf35|256329|chromosome 11 open reading frame 35##NM_173573|C11orf35|256329|chromosome 11 open reading frame 35	1.956936	CTCF.p2:-28:0.960	CTCF.p2:47:0.997
chr13	43706566	43706673	reg1012974.p1	8.837	+	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	-108917	+	AF126743 AY248898 NM_013238	-109270	+	CU692822 DQ892268 DQ895469 TSC_hg19_v1_chr13_-_43566378 AL831953 AF396928 BC023660 AK313877 AK292461 NM_001002264 NM_033255	-140249	-	BC024178 NM_001127615	496991	-	TSC_hg19_v1_chr13_-_44361107 BC068521 NM_001242863 NM_017993	654464	-	NM_001128303	746800	+	BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AF126743|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY248898|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_013238|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##DQ892268|EPSTI1|94240|epithelial stromal interaction 1 (breast)##DQ895469|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AL831953|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AF396928|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC023660|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK313877|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK292461|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_001002264|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_033255|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC024178|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001127615|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC068521|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001242863|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_017993|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1	0.01779	
chr2	154335367	154335526	reg1014285.p2	8.837	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-195	-	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-760302	+	BC028741 TSC_hg19_v1_chr2_+_153575133	-760315	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	392998	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	1219743	+	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	2851244	-	AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##BC028741|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	0.340849	CTCF.p2:-13:0.341
chr10	52413071	52413202	reg1016242.p1	8.836	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	-29433	-	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-404796	-	NM_018232	-575251	+	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	86574	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	232257	-	TSC_hg19_v1_chr10_-_52645440 BC054873 AK000324 NM_001198818 NM_001198819 NM_001198820 NM_014576 NM_138932 NM_138933	232299	-	AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor##BC054873|A1CF|29974|APOBEC1 complementation factor##AK000324|A1CF|29974|APOBEC1 complementation factor##NM_001198818|A1CF|29974|APOBEC1 complementation factor##NM_001198819|A1CF|29974|APOBEC1 complementation factor##NM_001198820|A1CF|29974|APOBEC1 complementation factor##NM_014576|A1CF|29974|APOBEC1 complementation factor##NM_138932|A1CF|29974|APOBEC1 complementation factor##NM_138933|A1CF|29974|APOBEC1 complementation factor	0.970865	CTCF.p2:-9:0.971
chr1	205198726	205198814	reg1012656.p1	8.836	+	AK293734 NM_001242925	-712	+	TSC_hg19_v1_chr1_+_205197073 AB007950 NM_014858 AK131419	-1687	+	TSC_hg19_v1_chr1_-_205180700 AY429674 BC060870 NM_015375 NM_199462	-18051	-	AY358192 TSC_hg19_v1_chr1_+_205236667	37864	+	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	92073	-	BC036076 TSC_hg19_v1_chr1_-_205313311	114540	-	AK293734|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_001242925|TMCC2|9911|transmembrane and coiled-coil domain family 2##AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2##AY429674|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC060870|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_015375|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_199462|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2##AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC036076|KLHDC8A|55220|kelch domain containing 8A	0.050362	
chr16	791036	791168	reg1013792.p2	8.835	+	TSC_hg19_v1_chr16_-_790998 AK056467 CU688868 BC030248 AY129231 AK025641 AK223005 AK293591 AK300087 AK301023 AK310875 NM_022493	-148	-	AK095675 TSC_hg19_v1_chr16_-_787923	-3196	-	BC033796 BC036747 AK054841 BC015008 AB209331 AK293575 NM_032304 BC004353 AK098340	-13965	+	AY743922 NM_005823 BC009272 NM_001177355 BC003512	19663	+	TSC_hg19_v1_chr16_+_811049 NM_013404 U40434 D49441	19972	+	NM_001025190	41823	-	AK056467|NARFL|64428|nuclear prelamin A recognition factor-like##BC030248|NARFL|64428|nuclear prelamin A recognition factor-like##AY129231|NARFL|64428|nuclear prelamin A recognition factor-like##AK025641|NARFL|64428|nuclear prelamin A recognition factor-like##AK223005|NARFL|64428|nuclear prelamin A recognition factor-like##AK293591|NARFL|64428|nuclear prelamin A recognition factor-like##AK300087|NARFL|64428|nuclear prelamin A recognition factor-like##AK301023|NARFL|64428|nuclear prelamin A recognition factor-like##AK310875|NARFL|64428|nuclear prelamin A recognition factor-like##NM_022493|NARFL|64428|nuclear prelamin A recognition factor-like##AK095675|NARFL|64428|nuclear prelamin A recognition factor-like##BC033796|HAGHL|84264|hydroxyacylglutathione hydrolase-like##BC036747|HAGHL|84264|hydroxyacylglutathione hydrolase-like##AK054841|HAGHL|84264|hydroxyacylglutathione hydrolase-like##BC015008|HAGHL|84264|hydroxyacylglutathione hydrolase-like##AB209331|HAGHL|84264|hydroxyacylglutathione hydrolase-like##AK293575|HAGHL|84264|hydroxyacylglutathione hydrolase-like##NM_032304|HAGHL|84264|hydroxyacylglutathione hydrolase-like##BC004353|HAGHL|84264|hydroxyacylglutathione hydrolase-like##AK098340|HAGHL|84264|hydroxyacylglutathione hydrolase-like##AY743922|MSLN|10232|mesothelin##NM_005823|MSLN|10232|mesothelin##BC009272|MSLN|10232|mesothelin##NM_001177355|MSLN|10232|mesothelin##BC003512|MSLN|10232|mesothelin##NM_013404|MSLN|10232|mesothelin##U40434|MSLN|10232|mesothelin##D49441|MSLN|10232|mesothelin##NM_001025190|MSLNL|401827|mesothelin-like	0.989512	CTCF.p2:9:0.990
chr17	7080841	7080959	reg1014880.p1	8.835	+	X55283 TSC_hg19_v1_chr17_-_7018083 BC017251 NM_001181 NM_001201352 NM_080912 NM_080913 AK310123 AK303787	-62730	-	X55284 TSC_hg19_v1_chr17_-_7018008 M11025	-62911	-	AF529374 U97197 AB528625 CU677885 DQ892652 DQ895891 NM_080914	-63307	-	BC032130 TSC_hg19_v1_chr17_-_7082568	1664	-	M10058 AB070933 TSC_hg19_v1_chr17_-_7082680 AK308375 AK124286 NM_001197216 NM_001671	1868	-	TSC_hg19_v1_chr17_-_7106561 BC040533	25694	-	X55283|ASGR2|433|asialoglycoprotein receptor 2##BC017251|ASGR2|433|asialoglycoprotein receptor 2##NM_001181|ASGR2|433|asialoglycoprotein receptor 2##NM_001201352|ASGR2|433|asialoglycoprotein receptor 2##NM_080912|ASGR2|433|asialoglycoprotein receptor 2##NM_080913|ASGR2|433|asialoglycoprotein receptor 2##AK310123|ASGR2|433|asialoglycoprotein receptor 2##AK303787|ASGR2|433|asialoglycoprotein receptor 2##X55284|ASGR2|433|asialoglycoprotein receptor 2##M11025|ASGR2|433|asialoglycoprotein receptor 2##AF529374|ASGR2|433|asialoglycoprotein receptor 2##U97197|ASGR2|433|asialoglycoprotein receptor 2##DQ892652|ASGR2|433|asialoglycoprotein receptor 2##DQ895891|ASGR2|433|asialoglycoprotein receptor 2##NM_080914|ASGR2|433|asialoglycoprotein receptor 2##BC032130|ASGR1|432|asialoglycoprotein receptor 1##M10058|ASGR1|432|asialoglycoprotein receptor 1##AB070933|ASGR1|432|asialoglycoprotein receptor 1##AK308375|ASGR1|432|asialoglycoprotein receptor 1##AK124286|ASGR1|432|asialoglycoprotein receptor 1##NM_001197216|ASGR1|432|asialoglycoprotein receptor 1##NM_001671|ASGR1|432|asialoglycoprotein receptor 1##BC040533|DLG4|1742|discs, large homolog 4 (Drosophila)	0.080207	
chr2	217642502	217642648	reg1016422.p1	8.835	+	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-82315	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-83009	-	L27560 AF147308 TSC_hg19_v1_chr2_-_217540846	-101791	-	BC029516 NM_003284	82206	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	1166206	-	AK001785 TSC_hg19_v1_chr2_-_218843551	1200971	-	AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##L27560|IGFBP5|3488|insulin-like growth factor binding protein 5##AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5##BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1	0.968851	CTCF.p2:-29:0.969
chr4	88274800	88274920	reg1016785.p1	8.835	+	HQ258364 AY268355 BC112303 BC112305 AB073347 AK292784 AY186249 AY186250 NM_001136230 NM_178135 AY358575	-30835	-	BC041901 TSC_hg19_v1_chr4_-_88141661 BX640727 BX538173 NM_020803 CR749265 BX640744 BX647454 BC041384	-133198	-	TSC_hg19_v1_chr4_+_87968211 AF177238 AF177239	-306609	+	AB529195 CU690256 CU679009 AF273056 AY358553 TSC_hg19_v1_chr4_-_88312322 BC014327 BC021673	37411	-	TSC_hg19_v1_chr4_-_88312341 AK075348 BC008650 BC036001 BC016367 BC011995 NM_016245	37531	-	TSC_hg19_v1_chr4_+_88343781 NM_001248011 NM_024047 AK027295 AK074845 NM_198038 AF265341 AF273028 AK075408 AK308028 BC000542 AY359123 CU674266	69019	+	HQ258364|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY268355|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112303|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112305|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AB073347|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AK292784|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186249|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186250|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_001136230|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_178135|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY358575|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC041901|KLHL8|57563|kelch-like 8 (Drosophila)##BX640727|KLHL8|57563|kelch-like 8 (Drosophila)##BX538173|KLHL8|57563|kelch-like 8 (Drosophila)##NM_020803|KLHL8|57563|kelch-like 8 (Drosophila)##CR749265|KLHL8|57563|kelch-like 8 (Drosophila)##BX640744|KLHL8|57563|kelch-like 8 (Drosophila)##BX647454|KLHL8|57563|kelch-like 8 (Drosophila)##BC041384|KLHL8|57563|kelch-like 8 (Drosophila)##AF177238|AFF1|4299|AF4/FMR2 family, member 1##AF177239|AFF1|4299|AF4/FMR2 family, member 1##AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AK075348|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC008650|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC036001|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC016367|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC011995|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##NM_016245|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##NM_001248011|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9	0.892395	CTCF.p2:-21:0.892
chr5	159865500	159865633	reg1005510.p1	8.835	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-16663	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-16712	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-19461	-	AK025130 TSC_hg19_v1_chr5_-_160112393	246773	-	AB018258 AK295081 AK090832 AX746642 NM_025153	413565	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	1109560	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.982538	CTCF.p2:-11:0.983
chr16	69430069	69430213	reg1016778.p1	8.834	+	TSC_hg19_v1_chr16_-_69419884 AF002999 BC024890 NM_005652	-10281	-	TSC_hg19_v1_chr16_-_69419641 U95970	-10506	-	DQ891397 DQ894576 CU676736 AY358268 TSC_hg19_v1_chr16_-_69385690 BC020827 NM_144676	-44458	-	TSC_hg19_v1_chr16_+_69458522 AB009282 NM_030579 BX647922 BC014431	28375	+	BC004373 AK291576 TSC_hg19_v1_chr16_+_69458565	28423	+	NM_001113178 NM_006599 NM_138713 NM_138714 NM_173214 NM_173215 TSC_hg19_v1_chr16_+_69599868	169727	+	AF002999|TERF2|7014|telomeric repeat binding factor 2##BC024890|TERF2|7014|telomeric repeat binding factor 2##NM_005652|TERF2|7014|telomeric repeat binding factor 2##U95970|TERF2|7014|telomeric repeat binding factor 2##DQ891397|TMED6|146456|transmembrane emp24 protein transport domain containing 6##DQ894576|TMED6|146456|transmembrane emp24 protein transport domain containing 6##AY358268|TMED6|146456|transmembrane emp24 protein transport domain containing 6##BC020827|TMED6|146456|transmembrane emp24 protein transport domain containing 6##NM_144676|TMED6|146456|transmembrane emp24 protein transport domain containing 6##AB009282|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##NM_030579|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##BX647922|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##BC014431|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##BC004373|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##AK291576|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##NM_001113178|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_006599|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_138713|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_138714|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_173214|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_173215|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	0.999565	CTCF.p2:-26:1.000
chr18	43419520	43419631	reg1015878.p1	8.834	+	AK172835 NM_213602 AY971516 AK290402 AK290400 AK095432	-13951	+	NM_001146037	-112658	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	-115418	+	AB046852 TSC_hg19_v1_chr18_-_43547294 NM_020964	127703	-	DQ893199 DQ893200 DQ893201 DQ893695 DQ896527 DQ896528 DQ896529 TSC_hg19_v1_chr18_-_43652247 BC035395 BC008216 NM_024430	232633	-	TSC_hg19_v1_chr18_-_43668143 AK129804	248602	-	AK172835|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_213602|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AY971516|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290402|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290400|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK095432|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AB046852|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##NM_020964|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##DQ893199|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893200|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893201|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893695|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896527|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896528|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896529|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##BC035395|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##NM_024430|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##AK129804|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	0.950787	CTCF.p2:11:0.951
chr2	102439848	102439980	reg1014838.p2	8.834	+	TSC_hg19_v1_chr2_+_102314168 NM_001242560 NM_004834 NM_145686 BC064691 AK296396 AF096300 NM_001242559 NM_145687 AB384511 AY212247 AY834276	-125562	+	AK131289 AK298610 NM_001145664 TSC_hg19_v1_chr2_-_102091212	-348721	-	TSC_hg19_v1_chr2_-_102003966 BC032949 BC047514 NM_153836 AB046109	-435925	-	TSC_hg19_v1_chr2_+_102508334 BC045694	68428	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	68618	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	168449	+	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK131289|RFX8|731220|regulatory factor X, 8##AK298610|RFX8|731220|regulatory factor X, 8##NM_001145664|RFX8|731220|regulatory factor X, 8##BC032949|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC047514|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_153836|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AB046109|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II	0.328749	CTCF.p2:1:0.329
chr12	26587380	26587501	reg1014210.p1	8.833	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-238855	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-239149	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	-309519	-	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	398640	-	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	503469	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	503790	-	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)	0.720384	CTCF.p2:0:0.720
chr17	9425510	9425621	reg1013821.p1	8.833	+	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	-500598	+	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	-556584	-	AY725853 AF128881 NM_014308	-609749	-	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	53566	-	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	53641	-	NM_001080556 NM_145054 AK074435 AB065281 BC025392 AK094847 AK315679 CU692990	54412	+	NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8##NM_001080556|WDR16|146845|WD repeat domain 16##NM_145054|WDR16|146845|WD repeat domain 16##AK074435|WDR16|146845|WD repeat domain 16##AB065281|WDR16|146845|WD repeat domain 16##BC025392|WDR16|146845|WD repeat domain 16##AK094847|WDR16|146845|WD repeat domain 16##AK315679|WDR16|146845|WD repeat domain 16	0.959959	CTCF.p2:25:0.960
chr16	67134961	67135074	reg1014674.p2	8.832	+	TSC_hg19_v1_chr16_+_67063217 AK290462 AK291834 AB463544 AF294326 BT006862 CU676254 DQ890558 DQ893719 L20298 AK311724	-71729	+	TSC_hg19_v1_chr16_+_67063051 BC018509 NM_001755 NM_022845	-71970	+	NM_001190201 NM_001190202 TSC_hg19_v1_chr16_+_67034441 AK094783 AK300792 AK295483 BC041823 BC064573	-100469	+	TSC_hg19_v1_chr16_+_67143864 AF176088 BC004556 NM_025187	8837	+	TSC_hg19_v1_chr16_+_67143927 CU678768	8985	+	AY358485 TSC_hg19_v1_chr16_-_67184866 BC012191 NM_033309	49849	-	AK290462|CBFB|865|core-binding factor, beta subunit##AK291834|CBFB|865|core-binding factor, beta subunit##AF294326|CBFB|865|core-binding factor, beta subunit##BT006862|CBFB|865|core-binding factor, beta subunit##DQ890558|CBFB|865|core-binding factor, beta subunit##DQ893719|CBFB|865|core-binding factor, beta subunit##L20298|CBFB|865|core-binding factor, beta subunit##AK311724|CBFB|865|core-binding factor, beta subunit##BC018509|CBFB|865|core-binding factor, beta subunit##NM_001755|CBFB|865|core-binding factor, beta subunit##NM_022845|CBFB|865|core-binding factor, beta subunit##NM_001190201|CES4A|283848|carboxylesterase 4A##NM_001190202|CES4A|283848|carboxylesterase 4A##AK094783|CES4A|283848|carboxylesterase 4A##AK300792|CES4A|283848|carboxylesterase 4A##AK295483|CES4A|283848|carboxylesterase 4A##BC041823|CES4A|283848|carboxylesterase 4A##BC064573|CES4A|283848|carboxylesterase 4A##AF176088|C16orf70|80262|chromosome 16 open reading frame 70##BC004556|C16orf70|80262|chromosome 16 open reading frame 70##NM_025187|C16orf70|80262|chromosome 16 open reading frame 70##AY358485|B3GNT9|84752|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9##BC012191|B3GNT9|84752|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9##NM_033309|B3GNT9|84752|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9	0.927493	CTCF.p2:7:0.927
chr18	71784342	71784465	reg1015322.p1	8.832	+	AF448838 BC050329 NM_001201465 NM_138966	-1249594	-	AF448839 NM_138999	-1251470	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	-1572673	-	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	30624	-	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	31391	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	174776	-	AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_182511|CBLN2|147381|cerebellin 2 precursor##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15##NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)	0.659141	CTCF.p2:6:0.659
chr3	169772121	169772268	reg1016364.p1	8.832	+	TSC_hg19_v1_chr3_+_169755984 AK311293	-16242	+	TSC_hg19_v1_chr3_+_169755782 BC000181	-16404	+	TSC_hg19_v1_chr3_+_169755748 NM_014373	-16440	+	TSC_hg19_v1_chr3_-_169899511 BC112944 BC131773 BX647868 EF560717 AF380154 AJ320486 AK023029 BC131772	127251	-	TSC_hg19_v1_chr3_-_169899522 AK022791 BC022325 AK300151 AK302371 BC070164 AK304411 NM_024947	127334	-	TSC_hg19_v1_chr3_+_169940214 NM_002740 L18964	168023	+	AK311293|GPR160|26996|G protein-coupled receptor 160##BC000181|GPR160|26996|G protein-coupled receptor 160##NM_014373|GPR160|26996|G protein-coupled receptor 160##BC112944|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC131773|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BX647868|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##EF560717|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AF380154|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AJ320486|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AK023029|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC131772|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AK022791|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC022325|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AK300151|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC070164|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AK304411|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##NM_024947|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##NM_002740|PRKCI|5584|protein kinase C, iota##L18964|PRKCI|5584|protein kinase C, iota	0.868426	CTCF.p2:7:0.868
chrY	13636642	13636797	reg1015165.p1	8.832	+	BC121113 BC121114 NM_001077697 U58096 BC075016 AY130858 M98525	-4271183	+	BC121113 NM_001197242 NM_003308 U58096 AK093413 AX748111 AY130858 M98525	-4332108	+	BC121113 BC121114 NM_001077697 U58096 BC075016 AK093413 AX748111 AY130858 NM_001164471 M94893 M98525	-4400642	+	TSC_hg19_v1_chrY_+_14774204 AL080135	1137530	+	AF000986 NM_004654	1176440	+	BC034942 NM_001122665	1379299	+	BC121113|TSPY1|7258|testis specific protein, Y-linked 1##BC121114|TSPY3|728137|testis specific protein, Y-linked 3##NM_001077697|TSPY3|728137|testis specific protein, Y-linked 3##U58096|TSPY1|7258|testis specific protein, Y-linked 1##BC075016|TSPY3|728137|testis specific protein, Y-linked 3##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##M98525|TSPY1|7258|testis specific protein, Y-linked 1##BC121113|TSPY1|7258|testis specific protein, Y-linked 1##NM_001197242|TSPY1|7258|testis specific protein, Y-linked 1##NM_003308|TSPY1|7258|testis specific protein, Y-linked 1##U58096|TSPY1|7258|testis specific protein, Y-linked 1##AK093413|TSPY4|728395|testis specific protein, Y-linked 4##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##M98525|TSPY1|7258|testis specific protein, Y-linked 1##BC121113|TSPY1|7258|testis specific protein, Y-linked 1##BC121114|TSPY3|728137|testis specific protein, Y-linked 3##NM_001077697|TSPY3|728137|testis specific protein, Y-linked 3##U58096|TSPY1|7258|testis specific protein, Y-linked 1##BC075016|TSPY3|728137|testis specific protein, Y-linked 3##AK093413|TSPY4|728395|testis specific protein, Y-linked 4##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##NM_001164471|TSPY4|728395|testis specific protein, Y-linked 4##M94893|TSPY1|7258|testis specific protein, Y-linked 1##M98525|TSPY1|7258|testis specific protein, Y-linked 1##AL080135|TTTY15|64595|testis-specific transcript, Y-linked 15 (non-protein coding)##AF000986|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked##NM_004654|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked##BC034942|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked##NM_001122665|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	0.829185	CTCF.p2:16:0.829
chr4	121640256	121640391	reg1017161.p1	8.831	+	EU831987 EU832080 AB528692 AF394735 TSC_hg19_v1_chr4_-_120987954 U65410 BC070283 AJ000186 BC005945 BC000356 U31278 AK223433 AK313827 AK298228 NM_002358	-652369	-	D89094 TSC_hg19_v1_chr4_-_120550167	-1090161	-	AB527373 AM393036 AM393270 AM393448 AK290189 BC126233 AJ004865 AF155192 TSC_hg19_v1_chr4_-_120549960 AF043731 NM_001083	-1090420	-	TSC_hg19_v1_chr4_-_121843992 AB464059 BC121037 BC121038 AK314293 AK310958 AF272897 AK056352 NM_018699 BC066942	203672	-	BC019351 AK289615 NM_024574 TSC_hg19_v1_chr4_-_121993690	353307	-	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	445161	-	EU831987|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##EU832080|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF394735|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC070283|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AJ000186|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC005945|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC000356|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK223433|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK313827|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK298228|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##NM_002358|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC121037|PRDM5|11107|PR domain containing 5##BC121038|PRDM5|11107|PR domain containing 5##AK314293|PRDM5|11107|PR domain containing 5##AK310958|PRDM5|11107|PR domain containing 5##AF272897|PRDM5|11107|PR domain containing 5##AK056352|PRDM5|11107|PR domain containing 5##NM_018699|PRDM5|11107|PR domain containing 5##BC066942|PRDM5|11107|PR domain containing 5##BC019351|NDNF|79625|neuron-derived neurotrophic factor##AK289615|NDNF|79625|neuron-derived neurotrophic factor##NM_024574|NDNF|79625|neuron-derived neurotrophic factor##AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3	0.880718	CTCF.p2:-12:0.881
chr9	73217483	73217596	reg1013640.p2	8.831	+	D31716 S72504 NM_001206	-187984	-	AB451404 CU686806 AB464604 EU446889 TSC_hg19_v1_chr9_-_73028875 BC074879 BC074880 AK313631 BC069431	-188864	-	TSC_hg19_v1_chr9_+_72873993 AB385355 AJ310550 DQ893364 DQ896768	-343550	+	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	266421	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	518997	-	AL136545 TSC_hg19_v1_chr9_-_74061901	844344	-	D31716|KLF9|687|Kruppel-like factor 9##S72504|KLF9|687|Kruppel-like factor 9##NM_001206|KLF9|687|Kruppel-like factor 9##AB451404|KLF9|687|Kruppel-like factor 9##EU446889|KLF9|687|Kruppel-like factor 9##BC074879|KLF9|687|Kruppel-like factor 9##BC074880|KLF9|687|Kruppel-like factor 9##AK313631|KLF9|687|Kruppel-like factor 9##BC069431|KLF9|687|Kruppel-like factor 9##AJ310550|SMC5|23137|structural maintenance of chromosomes 5##DQ893364|SMC5|23137|structural maintenance of chromosomes 5##DQ896768|SMC5|23137|structural maintenance of chromosomes 5##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	0.552744	CTCF.p2:21:0.553
chr19	39420931	39421112	reg1013680.p1	8.830	+	NM_001243212 TSC_hg19_v1_chr19_-_39402827	-18209	-	TSC_hg19_v1_chr19_+_39390657 AK057862 AK290569 BC015528 AB463937 DQ890633 DQ893804 CU677339 BT006743	-30303	+	TSC_hg19_v1_chr19_+_39390609 AB209784	-30428	+	TSC_hg19_v1_chr19_-_39421404 AB527892 CU692126 BC042912 AK296152 AK293414 AK000457 AK296170 AB029948 NM_001145901 NM_017827	286	-	NM_033362	326	+	TSC_hg19_v1_chr19_+_39421608 NM_021107 NM_033363 Y11681 BC007499 BC001617	582	+	NM_001243212|LOC643669|643669|uncharacterized LOC643669##AK057862|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##AK290569|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##BC015528|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##DQ890633|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##DQ893804|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##BT006743|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##AB209784|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##BC042912|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK296152|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK293414|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK000457|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK296170|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AB029948|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##NM_001145901|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##NM_017827|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##NM_033362|MRPS12|6183|mitochondrial ribosomal protein S12##NM_021107|MRPS12|6183|mitochondrial ribosomal protein S12##NM_033363|MRPS12|6183|mitochondrial ribosomal protein S12##Y11681|MRPS12|6183|mitochondrial ribosomal protein S12##BC007499|MRPS12|6183|mitochondrial ribosomal protein S12##BC001617|MRPS12|6183|mitochondrial ribosomal protein S12	0.544994	CTCF.p2:10:0.545
chr2	239371553	239371682	reg1014717.p1	8.830	+	TSC_hg19_v1_chr2_+_239335693 AF156777	-35928	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	-36011	+	TSC_hg19_v1_chr2_+_239229215 AB590948 CU691344 AF230877	-142359	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	385146	+	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	951031	-	TSC_hg19_v1_chr2_-_240322695 BC039904	951081	-	AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AF230877|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4	0.392069	CTCF.p2:20:0.392
chr6	16511424	16511579	reg1015659.p1	8.830	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-272650	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-368191	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-382064	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	250196	-	NM_001190766	590987	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	770353	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.996043	CTCF.p2:-3:0.996
chr10	97002920	97003027	reg1015079.p1	8.829	+	AK126134 NM_207321	-49017	+	M21942 M21941 DQ891400 DQ894579 M17397 M17398 AK303813 Y00498 AK292753 AK293327 AK293328 AK298401 AK315823 BC020596 NM_000770 NM_001198853 NM_001198854 NM_001198855	-173810	-	TSC_hg19_v1_chr10_+_96698414 AK289420 AK298458 BC020754 NM_000771 BC070317 M61855 M61857 BC125054 D00173 M21939 M15331 S46963	-304531	+	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	47809	-	AM393082 NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_006434	197942	-	TSC_hg19_v1_chr10_-_97321129 AB037717 BC152463 AK022468 AK300407 AK304753 AL117472 AM260536 NM_015385 NM_024991	318166	-	AK126134|C10orf129|142827|chromosome 10 open reading frame 129##NM_207321|C10orf129|142827|chromosome 10 open reading frame 129##M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1##AM393082|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1##NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1##AB037717|SORBS1|10580|sorbin and SH3 domain containing 1##BC152463|SORBS1|10580|sorbin and SH3 domain containing 1##AK022468|SORBS1|10580|sorbin and SH3 domain containing 1##AK300407|SORBS1|10580|sorbin and SH3 domain containing 1##AK304753|SORBS1|10580|sorbin and SH3 domain containing 1##AL117472|SORBS1|10580|sorbin and SH3 domain containing 1##AM260536|SORBS1|10580|sorbin and SH3 domain containing 1##NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1##NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1	0.933889	CTCF.p2:2:0.934
chr1	19567856	19567982	reg1016336.p1	8.829	+	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	-31173	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	-285120	-	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-338765	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	10073	-	AK075563 AK291618 TSC_hg19_v1_chr1_-_19578019	10098	-	BX648627 TSC_hg19_v1_chr1_-_19578031	10111	-	AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_001136265|IFFO2|126917|intermediate filament family orphan 2##DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090##AK075563|KIAA0090|23065|KIAA0090##AK291618|KIAA0090|23065|KIAA0090##BX648627|KIAA0090|23065|KIAA0090	0.899738	CTCF.p2:8:0.900
chr20	38880098	38880235	reg1014666.p1	8.829	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-1289177	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-1325098	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-1325177	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	437711	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	777328	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	777498	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.960372	CTCF.p2:0:0.960
chr6	33736470	33736584	reg1014588.p1	8.828	+	AK056586 AK223572 AK289935 BC089389 NM_001142883 NM_054111	-21806	-	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	-57014	-	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	-57064	-	AK301083 NM_001143944	18188	-	TSC_hg19_v1_chr6_-_33756897 BC051803	20364	-	BC039864 NM_181336 TSC_hg19_v1_chr6_-_33756906	20383	-	AK056586|IP6K3|117283|inositol hexakisphosphate kinase 3##AK223572|IP6K3|117283|inositol hexakisphosphate kinase 3##AK289935|IP6K3|117283|inositol hexakisphosphate kinase 3##BC089389|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_001142883|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_054111|IP6K3|117283|inositol hexakisphosphate kinase 3##AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##AK301083|LEMD2|221496|LEM domain containing 2##NM_001143944|LEMD2|221496|LEM domain containing 2##BC051803|LEMD2|221496|LEM domain containing 2##BC039864|LEMD2|221496|LEM domain containing 2##NM_181336|LEMD2|221496|LEM domain containing 2	0.980012	CTCF.p2:-9:0.980
chr3	39710062	39710151	reg1012414.p2	8.827	+	NM_182935 BC075796 AK127034 AK290187 BC022471	-200987	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	-260964	+	BC070263 NM_002295 TSC_hg19_v1_chr3_+_39448210 BC066941 BC107567 BC005391 BC062714 D28372 AF503367 BC013827 BC050688 X15005 BC034537 BC053370 BC071968 BC010418 BC071693 BC018867 BC071969 BC073863	-261896	+	TSC_hg19_v1_chr3_+_39851138 BC092512 AK126013 AF396687 NM_015460 BC109311 BC109312	141069	+	BC031275 AK057627 AK309874 AK309698 TSC_hg19_v1_chr3_-_40351022 BC045736 BC118565 BC106900	640962	-	NM_005875 TSC_hg19_v1_chr3_+_40351187 AK223448 BC006996 AF077052	641074	+	NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA##BC070263|RPSA|3921|ribosomal protein SA##NM_002295|RPSA|3921|ribosomal protein SA##BC066941|RPSA|3921|ribosomal protein SA##BC107567|RPSA|3921|ribosomal protein SA##BC005391|RPSA|3921|ribosomal protein SA##BC062714|RPSA|3921|ribosomal protein SA##AF503367|RPSA|3921|ribosomal protein SA##BC013827|RPSA|3921|ribosomal protein SA##BC050688|RPSA|3921|ribosomal protein SA##X15005|RPSA|3921|ribosomal protein SA##BC034537|RPSA|3921|ribosomal protein SA##BC053370|RPSA|3921|ribosomal protein SA##BC071968|RPSA|3921|ribosomal protein SA##BC010418|RPSA|3921|ribosomal protein SA##BC071693|RPSA|3921|ribosomal protein SA##BC018867|RPSA|3921|ribosomal protein SA##BC071969|RPSA|3921|ribosomal protein SA##BC073863|RPSA|3921|ribosomal protein SA##BC092512|MYRIP|25924|myosin VIIA and Rab interacting protein##AK126013|MYRIP|25924|myosin VIIA and Rab interacting protein##AF396687|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_015460|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109311|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109312|MYRIP|25924|myosin VIIA and Rab interacting protein##BC031275|FLJ33065|440952|uncharacterized LOC440952##AK057627|FLJ33065|440952|uncharacterized LOC440952##AK309874|FLJ33065|440952|uncharacterized LOC440952##BC045736|FLJ33065|440952|uncharacterized LOC440952##BC118565|FLJ33065|440952|uncharacterized LOC440952##BC106900|FLJ33065|440952|uncharacterized LOC440952##NM_005875|EIF1B|10289|eukaryotic translation initiation factor 1B##AK223448|EIF1B|10289|eukaryotic translation initiation factor 1B##BC006996|EIF1B|10289|eukaryotic translation initiation factor 1B##AF077052|EIF1B|10289|eukaryotic translation initiation factor 1B	0.987838	CTCF.p2:-1:0.988
chr4	21790995	21791114	reg1015758.p1	8.827	+	BX648990 DQ148490 NM_001035003	-91737	-	DQ148491 NM_001035004	-244776	-	AY118170 DQ148489 NM_147183 AK290998	-485485	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	159330	-	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	726500	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	903538	+	BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##DQ148491|KCNIP4|80333|Kv channel interacting protein 4##NM_001035004|KCNIP4|80333|Kv channel interacting protein 4##AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4##NM_147182|KCNIP4|80333|Kv channel interacting protein 4##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	0.999131	CTCF.p2:-3:0.999
chr11	127901574	127901681	reg1014775.p2	8.826	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1028322	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1030902	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1030967	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	490336	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	490507	-	BX640634 NM_001143820	555825	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.899719	CTCF.p2:-2:0.900
chr1	169979719	169979823	reg1015103.p1	8.826	+	TSC_hg19_v1_chr1_-_169863059 NM_020423 NM_181093	-116709	-	AL117233 TSC_hg19_v1_chr1_-_169863038 BC014662 AK292507	-116758	-	AL354614 NM_018186	-215222	+	AK122897 NM_001204517	58284	-	CU688542 DQ890952 DQ894114 AK026471 TSC_hg19_v1_chr1_-_170043807 AK315586 U59919 AK297368 AK303052 BC028679 NM_001204514 NM_001204516 NM_014970	63972	-	BC157860 BC171858 NM_001136107	135416	+	NM_020423|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##NM_181093|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##AL117233|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##BC014662|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##AK292507|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##AL354614|C1orf112|55732|chromosome 1 open reading frame 112##NM_018186|C1orf112|55732|chromosome 1 open reading frame 112##AK122897|KIFAP3|22920|kinesin-associated protein 3##NM_001204517|KIFAP3|22920|kinesin-associated protein 3##DQ890952|KIFAP3|22920|kinesin-associated protein 3##DQ894114|KIFAP3|22920|kinesin-associated protein 3##AK026471|KIFAP3|22920|kinesin-associated protein 3##AK315586|KIFAP3|22920|kinesin-associated protein 3##U59919|KIFAP3|22920|kinesin-associated protein 3##AK297368|KIFAP3|22920|kinesin-associated protein 3##AK303052|KIFAP3|22920|kinesin-associated protein 3##BC028679|KIFAP3|22920|kinesin-associated protein 3##NM_001204514|KIFAP3|22920|kinesin-associated protein 3##NM_001204516|KIFAP3|22920|kinesin-associated protein 3##NM_014970|KIFAP3|22920|kinesin-associated protein 3##BC157860|METTL11B|149281|methyltransferase like 11B##BC171858|METTL11B|149281|methyltransferase like 11B##NM_001136107|METTL11B|149281|methyltransferase like 11B	0.120818	
chr15	55933924	55934038	reg1014811.p2	8.826	+	AF457207 NM_015617	-52932	-	EF625686 TSC_hg19_v1_chr15_-_55880544	-53449	-	AF337549 NM_001033559 NM_001033560 NM_130810	-133550	-	AY630258 NM_173814 TSC_hg19_v1_chr15_-_56035276	101245	-	BC136605 BC144284 BC144285 AL832063 NM_198400	275335	-	TSC_hg19_v1_chr15_-_56285776 BC035707 AK304394 AY550969 BC152452 BC152562 D42055 NM_006154	351814	-	AF457207|PYGO1|26108|pygopus homolog 1 (Drosophila)##NM_015617|PYGO1|26108|pygopus homolog 1 (Drosophila)##EF625686|PYGO1|26108|pygopus homolog 1 (Drosophila)##AF337549|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001033559|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001033560|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_130810|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##AY630258|PRTG|283659|protogenin##NM_173814|PRTG|283659|protogenin##BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4	0.893182	CTCF.p2:22:0.893
chr4	75094539	75094682	reg1017313.p1	8.826	+	TSC_hg19_v1_chr4_+_75023834 AX794782 BC037529 NM_001144978 BC041943 AX794779	-70745	+	NM_002089 TSC_hg19_v1_chr4_-_74965027	-129588	-	CR542171 CU677427 AB590957 X53799 M57731 BC015753 BC053653 TSC_hg19_v1_chr4_-_74964913 AK308504 M36820 AK311304 BC005276	-129735	-	AK289455 BC127938 BC127939 DQ235269 AY358920 NM_001013442 DQ235264 DQ235265 DQ235266 DQ235267 DQ235268	79609	+	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	136330	+	BC009799 M30704 NM_001657	216242	+	BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_002089|CXCL2|2920|chemokine (C-X-C motif) ligand 2##CR542171|CXCL2|2920|chemokine (C-X-C motif) ligand 2##X53799|CXCL2|2920|chemokine (C-X-C motif) ligand 2##M57731|CXCL2|2920|chemokine (C-X-C motif) ligand 2##BC015753|CXCL2|2920|chemokine (C-X-C motif) ligand 2##BC053653|CXCL2|2920|chemokine (C-X-C motif) ligand 2##M36820|CXCL2|2920|chemokine (C-X-C motif) ligand 2##AK289455|EPGN|255324|epithelial mitogen homolog (mouse)##BC127938|EPGN|255324|epithelial mitogen homolog (mouse)##BC127939|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235269|EPGN|255324|epithelial mitogen homolog (mouse)##AY358920|EPGN|255324|epithelial mitogen homolog (mouse)##NM_001013442|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235264|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235265|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235266|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235267|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235268|EPGN|255324|epithelial mitogen homolog (mouse)##AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin	0.999842	CTCF.p2:0:1.000
chrX	130912646	130912826	reg1013893.p1	8.826	+	BC137050 AB529233 NM_001004486	-234738	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-489324	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-489474	-	TSC_hg19_v1_chrX_-_130964633 AK097911	51915	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	244585	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	244904	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.101302	
chr11	22191509	22191652	reg1015105.p1	8.825	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	-1500388	+	NM_004211 AF085412	-1570633	+	BC047226 TSC_hg19_v1_chr11_+_20409261 AK301449 AK298185 AK300591 BC037544 AB590779 EU831425 EU831518	-1782320	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	23067	+	AB032435 NM_020346	168086	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	455781	-	AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##BC047226|PRMT3|10196|protein arginine methyltransferase 3##AK301449|PRMT3|10196|protein arginine methyltransferase 3##AK298185|PRMT3|10196|protein arginine methyltransferase 3##AK300591|PRMT3|10196|protein arginine methyltransferase 3##BC037544|PRMT3|10196|protein arginine methyltransferase 3##EU831425|PRMT3|10196|protein arginine methyltransferase 3##EU831518|PRMT3|10196|protein arginine methyltransferase 3##AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F	0.994486	CTCF.p2:6:0.994
chr17	55038387	55038547	reg1016269.p1	8.825	+	CU679689 DQ892927 DQ896176 TSC_hg19_v1_chr17_-_55038404 AK313616 U06632 BC010385 NM_004645	-66	-	TSC_hg19_v1_chr17_-_54991410 NM_005082	-47062	-	AB384815 TSC_hg19_v1_chr17_-_54991388 D21205 AB208994 BC016924 BC042541	-47095	-	NM_021626 TSC_hg19_v1_chr17_+_55055513 AY358559 AF282618 AK027373 BC010078 AK298161 CU687218 BC072405 AF113214	17037	+	TSC_hg19_v1_chr17_+_55162639 NM_003488 BC000729 X97335	124147	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	124676	+	DQ892927|COIL|8161|coilin##DQ896176|COIL|8161|coilin##AK313616|COIL|8161|coilin##U06632|COIL|8161|coilin##BC010385|COIL|8161|coilin##NM_004645|COIL|8161|coilin##NM_005082|TRIM25|7706|tripartite motif containing 25##D21205|TRIM25|7706|tripartite motif containing 25##AB208994|TRIM25|7706|tripartite motif containing 25##BC016924|TRIM25|7706|tripartite motif containing 25##BC042541|TRIM25|7706|tripartite motif containing 25##NM_021626|SCPEP1|59342|serine carboxypeptidase 1##AY358559|SCPEP1|59342|serine carboxypeptidase 1##AF282618|SCPEP1|59342|serine carboxypeptidase 1##AK027373|SCPEP1|59342|serine carboxypeptidase 1##BC010078|SCPEP1|59342|serine carboxypeptidase 1##AK298161|SCPEP1|59342|serine carboxypeptidase 1##BC072405|SCPEP1|59342|serine carboxypeptidase 1##AF113214|SCPEP1|59342|serine carboxypeptidase 1##NM_003488|AKAP1|8165|A kinase (PRKA) anchor protein 1##BC000729|AKAP1|8165|A kinase (PRKA) anchor protein 1##X97335|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1	0.997478	CTCF.p2:12:0.997
chr12	107312685	107312798	reg1014536.p1	8.824	+	TSC_hg19_v1_chr12_+_107168357 NM_018157 BC132689 BC144056 BC034220 AK001482 AY221116	-144279	+	BC028582 NM_032491 AF332192 AK315698 BC030644 CU688514 CU688962 DQ890831 DQ893986	-234208	+	NM_001206691 AB095365 AK302837 AB044245	-317810	+	TSC_hg19_v1_chr12_+_107349591 NM_152261	36856	+	AK024021 TSC_hg19_v1_chr12_+_107349684 AK001731 BC020522 AK022770	36967	+	TSC_hg19_v1_chr12_-_107380925 BC036066 BC068468 AK222558 AY008301 BC050361 BC025984 AK024124 NM_001033050 NM_025198	68157	-	NM_018157|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC132689|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC144056|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC034220|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AK001482|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AY221116|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC028582|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_032491|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AF332192|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK315698|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##BC030644|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ890831|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ893986|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_001206691|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095365|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK302837|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB044245|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_152261|C12orf23|90488|chromosome 12 open reading frame 23##AK024021|C12orf23|90488|chromosome 12 open reading frame 23##AK001731|C12orf23|90488|chromosome 12 open reading frame 23##BC020522|C12orf23|90488|chromosome 12 open reading frame 23##AK022770|C12orf23|90488|chromosome 12 open reading frame 23##BC036066|MTERFD3|80298|MTERF domain containing 3##BC068468|MTERFD3|80298|MTERF domain containing 3##AK222558|MTERFD3|80298|MTERF domain containing 3##AY008301|MTERFD3|80298|MTERF domain containing 3##BC050361|MTERFD3|80298|MTERF domain containing 3##BC025984|MTERFD3|80298|MTERF domain containing 3##AK024124|MTERFD3|80298|MTERF domain containing 3##NM_001033050|MTERFD3|80298|MTERF domain containing 3##NM_025198|MTERFD3|80298|MTERF domain containing 3	0.227295	CTCF.p2:1:0.227
chr2	166810684	166810820	reg1014256.p2	8.824	+	AB073395 TSC_hg19_v1_chr2_-_166810287 AK057268 AK292942 BC055424 NM_024753	-451	-	TSC_hg19_v1_chr2_-_166650773 NM_004482	-159966	-	BC056246 TSC_hg19_v1_chr2_-_166650713	-160025	-	AB093548 AB093549 AB098335 AY043484 AF225985 NM_001165963 NM_001165964 NM_006920 EU368119	119402	-	EU368117 NM_001202435 DQ993522	194961	-	TSC_hg19_v1_chr2_-_167232465 AK307549 NM_002977	421728	-	AB073395|TTC21B|79809|tetratricopeptide repeat domain 21B##AK057268|TTC21B|79809|tetratricopeptide repeat domain 21B##AK292942|TTC21B|79809|tetratricopeptide repeat domain 21B##BC055424|TTC21B|79809|tetratricopeptide repeat domain 21B##NM_024753|TTC21B|79809|tetratricopeptide repeat domain 21B##NM_004482|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##BC056246|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##AB093548|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB093549|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB098335|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AY043484|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AF225985|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001165963|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001165964|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_006920|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##EU368119|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##EU368117|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001202435|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AK307549|SCN9A|6335|sodium channel, voltage-gated, type IX, alpha subunit##NM_002977|SCN9A|6335|sodium channel, voltage-gated, type IX, alpha subunit	0.997338	CTCF.p2:3:0.997
chr4	8548881	8549031	reg1017927.p1	8.824	+	TSC_hg19_v1_chr4_+_8442503 NM_152544	-106442	+	Y11411 BC017053 TSC_hg19_v1_chr4_-_8442447 AK225080 NM_001101667 NM_003501	-106500	-	TSC_hg19_v1_chr4_-_8430196 AK313242	-118755	-	AK128807 NM_080819 BC057778 AY359107	33359	+	AK056317 NM_001014447 NM_001014448 NM_003652 BC080539 BC006393 BC018913 TSC_hg19_v1_chr4_+_8594489	45483	+	U83411 TSC_hg19_v1_chr4_+_8594521	45567	+	NM_152544|METTL19|152992|methyltransferase like 19##Y11411|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##BC017053|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK225080|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_001101667|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_003501|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK313242|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK128807|GPR78|27201|G protein-coupled receptor 78##NM_080819|GPR78|27201|G protein-coupled receptor 78##BC057778|GPR78|27201|G protein-coupled receptor 78##AY359107|GPR78|27201|G protein-coupled receptor 78##AK056317|CPZ|8532|carboxypeptidase Z##NM_001014447|CPZ|8532|carboxypeptidase Z##NM_001014448|CPZ|8532|carboxypeptidase Z##NM_003652|CPZ|8532|carboxypeptidase Z##BC080539|CPZ|8532|carboxypeptidase Z##BC006393|CPZ|8532|carboxypeptidase Z##BC018913|CPZ|8532|carboxypeptidase Z##U83411|CPZ|8532|carboxypeptidase Z	0.0	
chr12	125721751	125721870	reg1014107.p1	8.823	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-171742	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-171869	+	TSC_hg19_v1_chr12_+_125478249 AF284094	-243550	+	NM_052907	89351	+	NM_001136103	3030137	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	3586633	-	AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##AF284094|BRI3BP|140707|BRI3 binding protein##NM_052907|TMEM132B|114795|transmembrane protein 132B##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4	0.999504	CTCF.p2:-11:1.000
chr16	50840240	50840389	reg1009246.p1	8.823	+	TSC_hg19_v1_chr16_+_50776066 AF161542 NM_001042412 BC012342	-64256	+	NM_001042355 NM_015247 TSC_hg19_v1_chr16_+_50775996 AK292975 AK225202 AJ250014 AK310832 AK056226	-64330	+	AF178930 AY187243 NM_022162 AY187244 AY187246 AB527390	-109213	+	AK307835 NM_001127892	344193	-	BC113881 BC113906 BC131548 Y18265 TSC_hg19_v1_chr16_-_51185251 AK295103 NM_002968	345098	-	NM_001242473	1267532	-	AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)##BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042355|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_015247|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK292975|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK225202|CYLD|1540|cylindromatosis (turban tumor syndrome)##AJ250014|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK310832|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK056226|CYLD|1540|cylindromatosis (turban tumor syndrome)##AF178930|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187243|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_022162|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187244|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187246|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AK307835|SALL1|6299|sal-like 1 (Drosophila)##NM_001127892|SALL1|6299|sal-like 1 (Drosophila)##BC113881|SALL1|6299|sal-like 1 (Drosophila)##BC113906|SALL1|6299|sal-like 1 (Drosophila)##BC131548|SALL1|6299|sal-like 1 (Drosophila)##Y18265|SALL1|6299|sal-like 1 (Drosophila)##AK295103|SALL1|6299|sal-like 1 (Drosophila)##NM_002968|SALL1|6299|sal-like 1 (Drosophila)##NM_001242473|LOC388276|388276|hCG2045437	0.999244	CTCF.p2:-17:0.999
chr10	90570167	90570285	reg1014921.p1	8.822	+	EF426484 NM_001128215	-7740	+	EF426483 NM_001102469	-49064	+	AB528790 EF426482 NM_001080518	-85926	+	AX721211 NM_144590	41477	-	TSC_hg19_v1_chr10_+_90640003 AK056086 BC010846 NM_020799	69752	+	J05192 X13839 BC017554 TSC_hg19_v1_chr10_-_90712531 AK300353 BC093052 AK300664 AK313294 NM_001613	142318	-	EF426484|LIPM|340654|lipase, family member M##NM_001128215|LIPM|340654|lipase, family member M##EF426483|LIPN|643418|lipase, family member N##NM_001102469|LIPN|643418|lipase, family member N##EF426482|LIPK|643414|lipase, family member K##NM_001080518|LIPK|643414|lipase, family member K##NM_144590|ANKRD22|118932|ankyrin repeat domain 22##AK056086|STAMBPL1|57559|STAM binding protein-like 1##BC010846|STAMBPL1|57559|STAM binding protein-like 1##NM_020799|STAMBPL1|57559|STAM binding protein-like 1##J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta##X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta	0.999084	CTCF.p2:-9:0.999
chr5	131608550	131608692	reg1018893.p1	8.822	+	AK225407 X93510 TSC_hg19_v1_chr5_+_131593388 BC003096 AB528934 BT007019 CU677715	-15214	+	TSC_hg19_v1_chr5_+_131593377 AK313508 AF153882	-15240	+	TSC_hg19_v1_chr5_+_131593340 BC016765 NM_001131027 NM_003687 AF154335	-15268	+	TSC_hg19_v1_chr5_+_131630078 AK309243 BC028313 NM_003059 Y09881 AB007448 AB529182 DQ890816 DQ893972	21565	+	TSC_hg19_v1_chr5_-_131630942 BC030525	22352	-	BX538252 TSC_hg19_v1_chr5_-_131705330	96678	-	AK225407|PDLIM4|8572|PDZ and LIM domain 4##X93510|PDLIM4|8572|PDZ and LIM domain 4##BC003096|PDLIM4|8572|PDZ and LIM domain 4##BT007019|PDLIM4|8572|PDZ and LIM domain 4##AK313508|PDLIM4|8572|PDZ and LIM domain 4##AF153882|PDLIM4|8572|PDZ and LIM domain 4##BC016765|PDLIM4|8572|PDZ and LIM domain 4##NM_001131027|PDLIM4|8572|PDZ and LIM domain 4##NM_003687|PDLIM4|8572|PDZ and LIM domain 4##AF154335|PDLIM4|8572|PDZ and LIM domain 4##BC028313|SLC22A4|6583|solute carrier family 22 (organic cation/ergothioneine transporter), member 4##NM_003059|SLC22A4|6583|solute carrier family 22 (organic cation/ergothioneine transporter), member 4##Y09881|SLC22A4|6583|solute carrier family 22 (organic cation/ergothioneine transporter), member 4##AB007448|SLC22A4|6583|solute carrier family 22 (organic cation/ergothioneine transporter), member 4##DQ890816|SLC22A4|6583|solute carrier family 22 (organic cation/ergothioneine transporter), member 4##DQ893972|SLC22A4|6583|solute carrier family 22 (organic cation/ergothioneine transporter), member 4##BX538252|LOC553103|553103|uncharacterized LOC553103	0.987404	CTCF.p2:-6:0.987
chr6	129820302	129820434	reg1017143.p1	8.822	+	NM_000426 NM_001079823 Z26653	-616055	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-978712	-	AK124031 NM_001164687	-1580610	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	210958	-	NM_001010876	362047	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	519357	+	NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	0.988954	CTCF.p2:-10:0.989
chr9	27033952	27034066	reg1014260.p2	8.822	+	BC126156 BC136298 AK222987 AK024955 BC056252 NM_022901	-28340	-	TSC_hg19_v1_chr9_+_26956416 NM_001099224 NM_025103 AK023707 AK225570 BC023634 AY040325 BC107742	-77598	+	TSC_hg19_v1_chr9_-_26947445 AL133608 NM_001031689	-86558	-	AK294887 NM_000459	75133	+	BC137351 BC137352 BC144602 BC014307 AJ278482 NM_001161585 NM_020641	263112	-	AF146759 AF315688 NM_020124 AY358855 AB463795	490313	+	BC126156|LRRC19|64922|leucine rich repeat containing 19##BC136298|LRRC19|64922|leucine rich repeat containing 19##AK222987|LRRC19|64922|leucine rich repeat containing 19##AK024955|LRRC19|64922|leucine rich repeat containing 19##BC056252|LRRC19|64922|leucine rich repeat containing 19##NM_022901|LRRC19|64922|leucine rich repeat containing 19##NM_001099224|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##NM_025103|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AK023707|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AK225570|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##BC023634|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AY040325|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##BC107742|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AL133608|PLAA|9373|phospholipase A2-activating protein##NM_001031689|PLAA|9373|phospholipase A2-activating protein##AK294887|TEK|7010|TEK tyrosine kinase, endothelial##NM_000459|TEK|7010|TEK tyrosine kinase, endothelial##BC137351|C9orf11|54586|chromosome 9 open reading frame 11##BC137352|C9orf11|54586|chromosome 9 open reading frame 11##BC144602|C9orf11|54586|chromosome 9 open reading frame 11##BC014307|C9orf11|54586|chromosome 9 open reading frame 11##AJ278482|C9orf11|54586|chromosome 9 open reading frame 11##NM_001161585|C9orf11|54586|chromosome 9 open reading frame 11##NM_020641|C9orf11|54586|chromosome 9 open reading frame 11##AF146759|IFNK|56832|interferon, kappa##AF315688|IFNK|56832|interferon, kappa##NM_020124|IFNK|56832|interferon, kappa##AY358855|IFNK|56832|interferon, kappa	0.332828	CTCF.p2:1:0.333
chr16	72794	72918	reg1015819.p1	8.821	+	None	None	None	None	None	None	None	None	None	BC001381 TSC_hg19_v1_chr16_+_103106	30203	+	TSC_hg19_v1_chr16_-_103609 AB587374 DQ896281 EU176418 BC011932 AF060223 AF051316 NM_016310	30775	-	TSC_hg19_v1_chr16_+_103838 NM_024571	30982	+	BC001381|SNRNP25|79622|small nuclear ribonucleoprotein 25kDa (U11/U12)##DQ896281|POLR3K|51728|polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa##EU176418|POLR3K|51728|polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa##BC011932|POLR3K|51728|polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa##AF060223|POLR3K|51728|polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa##AF051316|POLR3K|51728|polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa##NM_016310|POLR3K|51728|polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa##NM_024571|SNRNP25|79622|small nuclear ribonucleoprotein 25kDa (U11/U12)	0.637007	CTCF.p2:-6:0.637
chr1	3718154	3718257	reg1013836.p2	8.820	+	TSC_hg19_v1_chr1_-_3713056 BC031301 NM_020710	-5139	-	TSC_hg19_v1_chr1_+_3689334 BC042129 NM_001163724	-28869	+	AK057387 BC112112 NM_152492 BC112108	-49242	+	TSC_hg19_v1_chr1_-_3773757 AB011134 AK308191	55483	-	TSC_hg19_v1_chr1_-_3773776 BC001640 BC047450 BC026020 BC050721 NM_014704	55579	-	BC048797 NM_004402	55639	+	BC031301|LRRC47|57470|leucine rich repeat containing 47##NM_020710|LRRC47|57470|leucine rich repeat containing 47##BC042129|LOC388588|388588|uncharacterized protein LOC388588##NM_001163724|LOC388588|388588|uncharacterized protein LOC388588##AK057387|CCDC27|148870|coiled-coil domain containing 27##BC112112|CCDC27|148870|coiled-coil domain containing 27##NM_152492|CCDC27|148870|coiled-coil domain containing 27##BC112108|CCDC27|148870|coiled-coil domain containing 27##AB011134|CEP104|9731|centrosomal protein 104kDa##AK308191|CEP104|9731|centrosomal protein 104kDa##BC001640|CEP104|9731|centrosomal protein 104kDa##BC047450|CEP104|9731|centrosomal protein 104kDa##BC026020|CEP104|9731|centrosomal protein 104kDa##BC050721|CEP104|9731|centrosomal protein 104kDa##NM_014704|CEP104|9731|centrosomal protein 104kDa##BC048797|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)##NM_004402|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)	0.830069	CTCF.p2:4:0.830
chr16	76313064	76313166	reg1012828.p1	8.820	+	AB051550 NM_033401 TSC_hg19_v1_chr16_+_76311298	-1875	+	AK307901 NM_018975 TSC_hg19_v1_chr16_+_75681715 AK000669 BC022428 BC004465 BC005841 BC016739 BC078171 AF289599 AF250393 AB464292 CU678732 AF262988	-631408	+	BC013246 CU678582 DQ892301 DQ895500 TSC_hg19_v1_chr16_-_75681564 BC004132 D31890 AF285758 AK126584 D32053 AK315687 NM_001130089 NM_005548	-631554	-	NM_138994 AK057327 BC017266	30640	+	TSC_hg19_v1_chr16_+_77224857 BC024277 NM_014940	911727	+	AK023374 TSC_hg19_v1_chr16_+_77224865	911770	+	AB051550|CNTNAP4|85445|contactin associated protein-like 4##NM_033401|CNTNAP4|85445|contactin associated protein-like 4##AK307901|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##NM_018975|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AK000669|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC022428|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC004465|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC005841|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC016739|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC078171|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF289599|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF250393|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF262988|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC013246|KARS|3735|lysyl-tRNA synthetase##DQ892301|KARS|3735|lysyl-tRNA synthetase##DQ895500|KARS|3735|lysyl-tRNA synthetase##BC004132|KARS|3735|lysyl-tRNA synthetase##D31890|KARS|3735|lysyl-tRNA synthetase##AF285758|KARS|3735|lysyl-tRNA synthetase##AK126584|KARS|3735|lysyl-tRNA synthetase##D32053|KARS|3735|lysyl-tRNA synthetase##AK315687|KARS|3735|lysyl-tRNA synthetase##NM_001130089|KARS|3735|lysyl-tRNA synthetase##NM_005548|KARS|3735|lysyl-tRNA synthetase##NM_138994|CNTNAP4|85445|contactin associated protein-like 4##AK057327|CNTNAP4|85445|contactin associated protein-like 4##BC017266|CNTNAP4|85445|contactin associated protein-like 4##BC024277|MON1B|22879|MON1 homolog B (yeast)##NM_014940|MON1B|22879|MON1 homolog B (yeast)##AK023374|MON1B|22879|MON1 homolog B (yeast)	0.019673	
chr1	32713875	32713998	reg1012044.p1	8.819	+	NM_032648 BC004269	-1111	+	TSC_hg19_v1_chr1_-_32707234 AL833686 AK055560	-6681	-	TSC_hg19_v1_chr1_+_32688054 AB590351 BC003140 BT019597 CU678398 DQ891249 DQ894600	-25841	+	NM_005356 TSC_hg19_v1_chr1_+_32716847 AK098027 X05027 U23852 M36881 X13529	2949	+	NM_001042771 BC013200 AK303073 U07236 CU680550 DQ891675 DQ894861 AB527809 AJ865079 AF228313	25904	+	AK225555 TSC_hg19_v1_chr1_+_32757704 AK296308 AK313061	43767	+	NM_032648|FAM167B|84734|family with sequence similarity 167, member B##BC004269|FAM167B|84734|family with sequence similarity 167, member B##AL833686|MTMR9LP|339483|myotubularin related protein 9-like, pseudogene##AK055560|MTMR9LP|339483|myotubularin related protein 9-like, pseudogene##BC003140|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##BT019597|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##DQ891249|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##DQ894600|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##NM_005356|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK098027|LCK|3932|lymphocyte-specific protein tyrosine kinase##X05027|LCK|3932|lymphocyte-specific protein tyrosine kinase##U23852|LCK|3932|lymphocyte-specific protein tyrosine kinase##M36881|LCK|3932|lymphocyte-specific protein tyrosine kinase##X13529|LCK|3932|lymphocyte-specific protein tyrosine kinase##NM_001042771|LCK|3932|lymphocyte-specific protein tyrosine kinase##BC013200|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK303073|LCK|3932|lymphocyte-specific protein tyrosine kinase##U07236|LCK|3932|lymphocyte-specific protein tyrosine kinase##DQ891675|LCK|3932|lymphocyte-specific protein tyrosine kinase##DQ894861|LCK|3932|lymphocyte-specific protein tyrosine kinase##AJ865079|LCK|3932|lymphocyte-specific protein tyrosine kinase##AF228313|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK225555|HDAC1|3065|histone deacetylase 1##AK296308|HDAC1|3065|histone deacetylase 1##AK313061|HDAC1|3065|histone deacetylase 1	0.0	
chr3	62608403	62608535	reg1015028.p1	8.819	+	AK290464 NM_018008	-249280	-	BC017772 NM_020685	-303074	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	-303763	+	TSC_hg19_v1_chr3_-_62860565 AB587314	252163	-	AF458662 AB593079 TSC_hg19_v1_chr3_-_62861056 AB032947 NM_003716 NM_183393 NM_183394	252575	-	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	655448	+	AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##AF458662|CADPS|8618|Ca++-dependent secretion activator##AB593079|CADPS|8618|Ca++-dependent secretion activator##AB032947|CADPS|8618|Ca++-dependent secretion activator##NM_003716|CADPS|8618|Ca++-dependent secretion activator##NM_183393|CADPS|8618|Ca++-dependent secretion activator##NM_183394|CADPS|8618|Ca++-dependent secretion activator##NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin	0.997101	CTCF.p2:-25:0.997
chr2	3201989	3202124	reg1017292.p1	8.818	+	TSC_hg19_v1_chr2_-_2335085 AK307797	-866972	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	-867091	-	BC031690 TSC_hg19_v1_chr2_-_1946938	-1255150	-	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	179500	-	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	181449	+	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	321242	-	AK307797|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1	0.025299	
chr2	87795722	87795864	reg1016431.p1	8.818	+	TSC_hg19_v1_chr2_+_87755060 AK312010	-40733	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	-40776	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	-492461	-	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	251826	+	AK302429 NM_001078170	329492	-	CR749330 NM_001024457	489515	-	AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1##AK302429|RGPD2|729857|RANBP2-like and GRIP domain containing 2##NM_001078170|RGPD2|729857|RANBP2-like and GRIP domain containing 2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1	0.297419	CTCF.p2:-17:0.297
chr9	106939436	106939553	reg1016389.p1	8.818	+	TSC_hg19_v1_chr9_+_106856844 BC071750 NM_001042550 AK001485 BC032705 BC107891	-82622	+	TSC_hg19_v1_chr9_+_106856625 AY739716 BC130385 BC144163	-82841	+	TSC_hg19_v1_chr9_+_106856601 AL833191 NM_001042551 NM_006444 BC055081 BC061906 AK307752 AK292599 BC017845 AF092563	-82923	+	BC140739 AB529294 NM_001004485	327004	+	NM_001001919 AB463956	349995	-	AB529293 NM_001001961 BC136949 BC136952	359620	-	BC071750|SMC2|10592|structural maintenance of chromosomes 2##NM_001042550|SMC2|10592|structural maintenance of chromosomes 2##AK001485|SMC2|10592|structural maintenance of chromosomes 2##BC032705|SMC2|10592|structural maintenance of chromosomes 2##BC107891|SMC2|10592|structural maintenance of chromosomes 2##AY739716|SMC2|10592|structural maintenance of chromosomes 2##BC130385|SMC2|10592|structural maintenance of chromosomes 2##BC144163|SMC2|10592|structural maintenance of chromosomes 2##AL833191|SMC2|10592|structural maintenance of chromosomes 2##NM_001042551|SMC2|10592|structural maintenance of chromosomes 2##NM_006444|SMC2|10592|structural maintenance of chromosomes 2##BC055081|SMC2|10592|structural maintenance of chromosomes 2##BC061906|SMC2|10592|structural maintenance of chromosomes 2##AK307752|SMC2|10592|structural maintenance of chromosomes 2##AK292599|SMC2|10592|structural maintenance of chromosomes 2##BC017845|SMC2|10592|structural maintenance of chromosomes 2##AF092563|SMC2|10592|structural maintenance of chromosomes 2##BC140739|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1##NM_001004485|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1##NM_001001919|OR13C4|138804|olfactory receptor, family 13, subfamily C, member 4##NM_001001961|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3##BC136949|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3##BC136952|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	0.718056	CTCF.p2:-8:0.718
chr1	35764234	35764384	reg1014727.p1	8.817	+	TSC_hg19_v1_chr1_+_35734624 BC127113 BC127114 AB587559	-29681	+	TSC_hg19_v1_chr1_+_35734567 AK308320 NM_005095	-29747	+	NM_005066 TSC_hg19_v1_chr1_-_35658747 BC051192	-105564	-	BX648067 TSC_hg19_v1_chr1_+_35851133	86808	+	TSC_hg19_v1_chr1_-_35920081 AK090878	155849	-	TSC_hg19_v1_chr1_-_36022989 BC014530 AF275679 AK314605 AY163234	258660	-	BC127113|ZMYM4|9202|zinc finger, MYM-type 4##BC127114|ZMYM4|9202|zinc finger, MYM-type 4##AK308320|ZMYM4|9202|zinc finger, MYM-type 4##NM_005095|ZMYM4|9202|zinc finger, MYM-type 4##NM_005066|SFPQ|6421|splicing factor proline/glutamine-rich##BC051192|SFPQ|6421|splicing factor proline/glutamine-rich##BX648067|ZMYM4|9202|zinc finger, MYM-type 4##AK090878|KIAA0319L|79932|KIAA0319-like##BC014530|KIAA0319L|79932|KIAA0319-like##AF275679|KIAA0319L|79932|KIAA0319-like##AK314605|KIAA0319L|79932|KIAA0319-like##AY163234|KIAA0319L|79932|KIAA0319-like	0.990326	CTCF.p2:22:0.990
chr4	141174460	141174568	reg1014346.p2	8.817	+	NM_018717 TSC_hg19_v1_chr4_-_141075339	-99182	-	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	-100176	-	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	-587380	+	AK027797 NM_032547	3925	+	NM_001153446 NM_001153635 BC062684 NM_001153585 NM_001153690	90091	+	NM_001153484 NM_001153552 NM_001153663 TSC_hg19_v1_chr4_+_141294715	120182	+	NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)##AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##AK027797|SCOC|60592|short coiled-coil protein##NM_032547|SCOC|60592|short coiled-coil protein##NM_001153446|SCOC|60592|short coiled-coil protein##NM_001153635|SCOC|60592|short coiled-coil protein##BC062684|SCOC|60592|short coiled-coil protein##NM_001153585|SCOC|60592|short coiled-coil protein##NM_001153690|SCOC|60592|short coiled-coil protein##NM_001153484|SCOC|60592|short coiled-coil protein##NM_001153552|SCOC|60592|short coiled-coil protein##NM_001153663|SCOC|60592|short coiled-coil protein	0.920161	CTCF.p2:-9:0.920
chr4	170232906	170233054	reg1017245.p1	8.817	+	TSC_hg19_v1_chr4_-_170192202 NM_020870	-40760	-	AK021429 TSC_hg19_v1_chr4_-_170192108	-40873	-	TSC_hg19_v1_chr4_-_170192099 BC053671	-40933	-	BC015147 BC114491 AB067488 CR933642 AL050385 TSC_hg19_v1_chr4_-_170533735 BC068201 CR936672	300656	-	TSC_hg19_v1_chr4_-_170533762 NM_001199397 NM_001199398 NM_001199399 NM_001199400 NM_012224	300789	-	TSC_hg19_v1_chr4_+_170541683 NM_001243372 NM_001829 NM_173872	308691	+	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1##AK021429|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1##BC015147|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC114491|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AB067488|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR933642|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AL050385|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC068201|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR936672|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199397|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199398|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199399|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199400|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_012224|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001243372|CLCN3|1182|chloride channel 3##NM_001829|CLCN3|1182|chloride channel 3##NM_173872|CLCN3|1182|chloride channel 3	0.0	
chr16	16389911	16390032	reg1015344.p1	8.816	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-63441	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-63483	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-63489	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	1174834	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	2183420	-	TSC_hg19_v1_chr16_-_18798077 AK127316	2408125	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.514946	CTCF.p2:-16:0.515
chr10	17914799	17914953	reg1015283.p1	8.815	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	-63473	+	NM_001098844 BC157856	-120622	+	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	-228646	+	NM_001098844 BC157856	126345	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	183517	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	325953	+	BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	0.896514	CTCF.p2:27:0.897
chr3	418841	418998	reg1017267.p1	8.815	+	NM_001253388 BC104918 BC143496 BC143498 AB384920	-57507	+	TSC_hg19_v1_chr3_+_239671 AK055236	-179248	+	TSC_hg19_v1_chr3_+_238541 AF002246	-180327	+	AK126307 TSC_hg19_v1_chr3_+_577916	158996	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	715744	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	1721642	+	NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK055236|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AF002246|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4	0.982559	CTCF.p2:20:0.983
chr6	8131636	8131751	reg1015522.p1	8.815	+	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-28903	-	TSC_hg19_v1_chr6_-_8064644 AK301142 AF426434 NM_001199322 NM_001199323 NM_201280	-67033	-	TSC_hg19_v1_chr6_-_8064623 BC052310 AK025442 BC032438 CR749569 BX647336 BC119645 BC119644	-67092	-	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	304015	-	TSC_hg19_v1_chr6_+_8435870 BC040612	304195	+	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	2280923	-	AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AK301142|MUTED|63915|muted homolog (mouse)##AF426434|MUTED|63915|muted homolog (mouse)##NM_001199322|MUTED|63915|muted homolog (mouse)##NM_001199323|MUTED|63915|muted homolog (mouse)##NM_201280|MUTED|63915|muted homolog (mouse)##BC052310|MUTED-TXNDC5|100526836|MUTED-TXNDC5 readthrough (non-protein coding)##AK025442|MUTED|63915|muted homolog (mouse)##BC032438|MUTED|63915|muted homolog (mouse)##CR749569|MUTED|63915|muted homolog (mouse)##BX647336|MUTED|63915|muted homolog (mouse)##BC119645|MUTED|63915|muted homolog (mouse)##BC119644|MUTED|63915|muted homolog (mouse)##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.745363	CTCF.p2:-9:0.745
chr16	85513925	85514087	reg1015473.p2	8.814	+	BC093665 BC111944 AK126284 NM_198491	-367952	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-452636	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-468877	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	131015	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	132947	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	208536	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.027787	
chr14	46813661	46813800	reg1017551.p1	8.813	+	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-1091084	-	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	-1091363	-	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-1208541	+	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	307253	-	BC028193 NM_182830	998685	-	AK309211 NM_001113498	1330426	-	AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	0.953219	CTCF.p2:4:0.953
chr4	14873903	14874009	reg1014886.p2	8.813	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-1244639	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-1324542	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-1327881	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	129753	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	130039	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	130341	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.834967	CTCF.p2:-9:0.835
chr4	175976335	175976444	reg1013866.p2	8.812	+	NM_001130703 NM_001130704 NM_001130705 NM_014269 AK292410 BC036070	-136856	+	U93917 BC036086 NM_001042543 NM_006529	-225969	-	AK300524 NM_000860 NM_001145816	-532598	-	CU692222 CU692662 DQ892372 DQ895581 TSC_hg19_v1_chr4_-_176733403	757004	-	BC010461 BC022508 TSC_hg19_v1_chr4_-_176733419 D49958	757052	-	BC044612 BC053954 TSC_hg19_v1_chr4_-_176733905	757517	-	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29##NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29##AK292410|ADAM29|11086|ADAM metallopeptidase domain 29##BC036070|ADAM29|11086|ADAM metallopeptidase domain 29##U93917|GLRA3|8001|glycine receptor, alpha 3##BC036086|GLRA3|8001|glycine receptor, alpha 3##NM_001042543|GLRA3|8001|glycine receptor, alpha 3##NM_006529|GLRA3|8001|glycine receptor, alpha 3##AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##DQ892372|GPM6A|2823|glycoprotein M6A##DQ895581|GPM6A|2823|glycoprotein M6A##BC010461|GPM6A|2823|glycoprotein M6A##BC022508|GPM6A|2823|glycoprotein M6A##D49958|GPM6A|2823|glycoprotein M6A##BC044612|GPM6A|2823|glycoprotein M6A##BC053954|GPM6A|2823|glycoprotein M6A	0.880469	CTCF.p2:-2:0.880
chr21	26794165	26794276	reg1013166.p1	8.811	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-993152	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-4423447	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-4423530	+	TSC_hg19_v1_chr21_+_26934442 AF402776	140252	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	185595	-	NM_021219 TSC_hg19_v1_chr21_+_27011719	217433	+	AK124194|FLJ42200|400860|FLJ42200 protein##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##NM_021219|JAM2|58494|junctional adhesion molecule 2	0.661279	CTCF.p2:9:0.661
chr16	2977154	2977279	reg1014779.p1	8.810	+	TSC_hg19_v1_chr16_+_2961994 AB046772	-15219	+	TSC_hg19_v1_chr16_+_2961983 BC028572 NM_020912 NM_032296	-15252	+	NM_001142499 NM_001142500 NM_138439 TSC_hg19_v1_chr16_+_2933215 BC014089	-43960	+	BC009383 NM_001253725 NM_001253726 NM_024507 NM_172229 AK075033 AK301953 AK027669 BC003533 AK223422 AB086355 AB086356 AB086357 AB086405 DQ896447	37152	+	NM_152341 TSC_hg19_v1_chr16_+_3019348	42130	+	TSC_hg19_v1_chr16_+_3019556 AK291373 AK054564 AK092173 AX747391 BC033703 AL832527 EU831903 EU831998 AY424282	42354	+	AB046772|FLYWCH1|84256|FLYWCH-type zinc finger 1##BC028572|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_020912|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_032296|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_001142499|FLYWCH2|114984|FLYWCH family member 2##NM_001142500|FLYWCH2|114984|FLYWCH family member 2##NM_138439|FLYWCH2|114984|FLYWCH family member 2##BC014089|FLYWCH2|114984|FLYWCH family member 2##BC009383|KREMEN2|79412|kringle containing transmembrane protein 2##NM_001253725|KREMEN2|79412|kringle containing transmembrane protein 2##NM_001253726|KREMEN2|79412|kringle containing transmembrane protein 2##NM_024507|KREMEN2|79412|kringle containing transmembrane protein 2##NM_172229|KREMEN2|79412|kringle containing transmembrane protein 2##AK075033|KREMEN2|79412|kringle containing transmembrane protein 2##AK301953|KREMEN2|79412|kringle containing transmembrane protein 2##AK027669|KREMEN2|79412|kringle containing transmembrane protein 2##BC003533|KREMEN2|79412|kringle containing transmembrane protein 2##AK223422|KREMEN2|79412|kringle containing transmembrane protein 2##AB086355|KREMEN2|79412|kringle containing transmembrane protein 2##AB086356|KREMEN2|79412|kringle containing transmembrane protein 2##AB086357|KREMEN2|79412|kringle containing transmembrane protein 2##AB086405|KREMEN2|79412|kringle containing transmembrane protein 2##DQ896447|KREMEN2|79412|kringle containing transmembrane protein 2##NM_152341|PAQR4|124222|progestin and adipoQ receptor family member IV##AK291373|PAQR4|124222|progestin and adipoQ receptor family member IV##AK054564|PAQR4|124222|progestin and adipoQ receptor family member IV##AK092173|PAQR4|124222|progestin and adipoQ receptor family member IV##BC033703|PAQR4|124222|progestin and adipoQ receptor family member IV##AL832527|PAQR4|124222|progestin and adipoQ receptor family member IV##EU831903|PAQR4|124222|progestin and adipoQ receptor family member IV##EU831998|PAQR4|124222|progestin and adipoQ receptor family member IV##AY424282|PAQR4|124222|progestin and adipoQ receptor family member IV	0.993658	CTCF.p2:17:0.994
chr17	44364151	44364280	reg1014517.p1	8.810	+	AK291259 NM_001193465	-61488	-	TSC_hg19_v1_chr17_-_44270338 BC098376 NM_015443	-93906	-	TSC_hg19_v1_chr17_-_44270149 BX538006 NM_001193466	-94061	-	BC040501 CR749232 NM_014834	8281	+	BC020869 AK289590 AK315857 BC041803 BC030570 BX647266 NM_001039083 NM_001103154 NM_001113738 NM_016632	74907	-	BC040501 CR749232 NM_001006607	225860	+	AK291259|KIAA1267|284058|KIAA1267##NM_001193465|KIAA1267|284058|KIAA1267##BC098376|KIAA1267|284058|KIAA1267##NM_015443|KIAA1267|284058|KIAA1267##BX538006|KIAA1267|284058|KIAA1267##NM_001193466|KIAA1267|284058|KIAA1267##BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_014834|LRRC37A|9884|leucine rich repeat containing 37A##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AK289590|ARL17A|51326|ADP-ribosylation factor-like 17A##AK315857|ARL17A|51326|ADP-ribosylation factor-like 17A##BC041803|ARL17A|51326|ADP-ribosylation factor-like 17A##BC030570|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001039083|ARL17B|100506084|ADP-ribosylation factor-like 17B##NM_001103154|ARL17B|100506084|ADP-ribosylation factor-like 17B##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A##BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_001006607|LRRC37A2|474170|leucine rich repeat containing 37, member A2	0.962456	CTCF.p2:-1:0.962
chr3	190962186	190962297	reg1014734.p2	8.810	+	AY398681 AY573933 BC128106 BC128107 NM_198184	-31920	+	NM_001146686	-381777	-	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	-730364	+	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	84925	+	AK090630 AX746546 NM_198152	86083	-	AY858112 NM_001083308	216710	+	AY398681|OSTN|344901|osteocrin##AY573933|OSTN|344901|osteocrin##BC128106|OSTN|344901|osteocrin##BC128107|OSTN|344901|osteocrin##NM_198184|OSTN|344901|osteocrin##NM_001146686|GMNC|647309|geminin coiled-coil domain containing##NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2	0.0	
chr4	172955332	172955443	reg1015856.p1	8.810	+	NM_001034845 BC047551 BC144036 BC144037 BC063015	-220743	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-1943973	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-1944189	-	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	1134565	+	BC043556 TSC_hg19_v1_chr4_-_174090314	1134923	-	BC040577 TSC_hg19_v1_chr4_-_174090813	1135420	-	NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.985206	CTCF.p2:8:0.985
chr6	167411386	167411502	reg1015329.p2	8.810	+	AK315467 TSC_hg19_v1_chr6_-_167370038 BC036282 NM_003730	-41387	-	TSC_hg19_v1_chr6_-_167370030 BC001660 BC001819 BC039713 BC051912 AJ419865 AJ419866 AJ419867 U85625	-41434	-	DQ884402 TSC_hg19_v1_chr6_-_167369732	-41742	-	TSC_hg19_v1_chr6_+_167412884 NM_007045 NM_194429 Y18046 AK294950 AK289846 BX647686 AK312791 BC011902 AB590215 CU680104 DQ893037 DQ896278 AJ420472	1409	+	NM_004367	113850	+	NM_031409 U68031 U68030	124805	+	AK315467|RNASET2|8635|ribonuclease T2##BC036282|RNASET2|8635|ribonuclease T2##NM_003730|RNASET2|8635|ribonuclease T2##BC001660|RNASET2|8635|ribonuclease T2##BC001819|RNASET2|8635|ribonuclease T2##BC039713|RNASET2|8635|ribonuclease T2##BC051912|RNASET2|8635|ribonuclease T2##AJ419865|RNASET2|8635|ribonuclease T2##AJ419866|RNASET2|8635|ribonuclease T2##AJ419867|RNASET2|8635|ribonuclease T2##U85625|RNASET2|8635|ribonuclease T2##NM_007045|FGFR1OP|11116|FGFR1 oncogene partner##NM_194429|FGFR1OP|11116|FGFR1 oncogene partner##Y18046|FGFR1OP|11116|FGFR1 oncogene partner##AK294950|FGFR1OP|11116|FGFR1 oncogene partner##AK289846|FGFR1OP|11116|FGFR1 oncogene partner##AK312791|FGFR1OP|11116|FGFR1 oncogene partner##BC011902|FGFR1OP|11116|FGFR1 oncogene partner##DQ893037|FGFR1OP|11116|FGFR1 oncogene partner##DQ896278|FGFR1OP|11116|FGFR1 oncogene partner##AJ420472|FGFR1OP|11116|FGFR1 oncogene partner##NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6	0.0	
chr6	41673739	41673919	reg1012542.p1	8.810	+	AJ608793 AJ608794 AJ608792 TSC_hg19_v1_chr6_-_41673723	-128	-	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	-67607	+	TSC_hg19_v1_chr6_+_41514342 BC052803	-159492	+	TSC_hg19_v1_chr6_-_41702787 AJ608787 BC032448 NM_007162	28936	-	M33782 TSC_hg19_v1_chr6_-_41703347	29517	-	TSC_hg19_v1_chr6_-_41703962 AK298390 AJ608786 NM_001167827	30143	-	AJ608793|TFEB|7942|transcription factor EB##AJ608794|TFEB|7942|transcription factor EB##AJ608792|TFEB|7942|transcription factor EB##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor##BC052803|FOXP4|116113|forkhead box P4##AJ608787|TFEB|7942|transcription factor EB##BC032448|TFEB|7942|transcription factor EB##NM_007162|TFEB|7942|transcription factor EB##M33782|TFEB|7942|transcription factor EB##AK298390|TFEB|7942|transcription factor EB##AJ608786|TFEB|7942|transcription factor EB##NM_001167827|TFEB|7942|transcription factor EB	0.966748	CTCF.p2:-29:0.967
chr3	149956947	149957040	reg1012508.p1	8.809	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-267913	+	TSC_hg19_v1_chr3_-_149688960 BC043646	-268064	-	TSC_hg19_v1_chr3_-_149688683 AB464068 AF228738 EU832616 EU832688 AK311782 L10678 BC002964 BC095444 AK307227 AK311780 BC018049 AK297915 NM_002628 NM_053024	-268297	-	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	169079	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	169770	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	306977	-	BC012363|LOC646903|646903|uncharacterized LOC646903##BC043646|PFN2|5217|profilin 2##AF228738|PFN2|5217|profilin 2##EU832616|PFN2|5217|profilin 2##EU832688|PFN2|5217|profilin 2##AK311782|PFN2|5217|profilin 2##L10678|PFN2|5217|profilin 2##BC002964|PFN2|5217|profilin 2##BC095444|PFN2|5217|profilin 2##AK307227|PFN2|5217|profilin 2##AK311780|PFN2|5217|profilin 2##BC018049|PFN2|5217|profilin 2##AK297915|PFN2|5217|profilin 2##NM_002628|PFN2|5217|profilin 2##NM_053024|PFN2|5217|profilin 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.949496	CTCF.p2:2:0.949
chr18	73191090	73191199	reg1014724.p1	8.808	+	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-51522	-	TSC_hg19_v1_chr18_+_72998258 AK223545 BC024152	-192802	+	TSC_hg19_v1_chr18_+_72922751 NM_005786 AK091155 AX746813	-268399	+	BC108287 TSC_hg19_v1_chr18_-_74092260	901106	-	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	1016011	-	TSC_hg19_v1_chr18_-_74534239 BC032908	1343095	-	BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1##BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1##NM_005786|TSHZ1|10194|teashirt zinc finger homeobox 1##BC108287|ZNF516|9658|zinc finger protein 516##D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC032908|LOC100131655|100131655|uncharacterized LOC100131655	0.523632	CTCF.p2:13:0.524
chr4	129703624	129703724	reg1013720.p1	8.808	+	AK131272 NM_006320	-493691	-	TSC_hg19_v1_chr4_-_129208969 BC092478	-494683	-	AK091741 AX747155 TSC_hg19_v1_chr4_-_129208964 BC016692	-494710	-	TSC_hg19_v1_chr4_+_129730875 NM_024900 NM_199320 AK027620 AF520952 AK304815 AK127326	27196	+	TSC_hg19_v1_chr4_+_129732427 BC032376	28779	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	310916	-	AK131272|PGRMC2|10424|progesterone receptor membrane component 2##NM_006320|PGRMC2|10424|progesterone receptor membrane component 2##BC092478|PGRMC2|10424|progesterone receptor membrane component 2##AK091741|PGRMC2|10424|progesterone receptor membrane component 2##BC016692|PGRMC2|10424|progesterone receptor membrane component 2##NM_024900|PHF17|79960|PHD finger protein 17##NM_199320|PHF17|79960|PHD finger protein 17##AK027620|PHF17|79960|PHD finger protein 17##AF520952|PHF17|79960|PHD finger protein 17##AK304815|PHF17|79960|PHD finger protein 17##AK127326|PHF17|79960|PHD finger protein 17##BC032376|PHF17|79960|PHD finger protein 17##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1	0.0	
chr1	44558013	44558127	reg1010712.p1	8.807	+	TSC_hg19_v1_chr1_-_44497141 AK315933 NM_001024845	-60931	-	TSC_hg19_v1_chr1_-_44497033 AK304057 AK298611	-61028	-	NM_006934 NM_201649 S70609 S70612 AK315233	-75067	-	BC049844 NM_173484 AK097479 BC035408 CU690622	26479	+	TSC_hg19_v1_chr1_+_44679145 NM_001034023 NM_001034024 NM_019100 AL136657 AK300372 BC002855 AK300442 AK293598 AK021605 AK289366 AK298793 AB037846 AL137200 BC008053 AK300217	121073	+	AB528814 TSC_hg19_v1_chr1_-_44820904 AF007157	262738	-	AK315933|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_001024845|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK304057|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK298611|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##BC049844|KLF17|128209|Kruppel-like factor 17##NM_173484|KLF17|128209|Kruppel-like factor 17##AK097479|KLF17|128209|Kruppel-like factor 17##BC035408|KLF17|128209|Kruppel-like factor 17##NM_001034023|DMAP1|55929|DNA methyltransferase 1 associated protein 1##NM_001034024|DMAP1|55929|DNA methyltransferase 1 associated protein 1##NM_019100|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AL136657|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300372|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC002855|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300442|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK293598|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK021605|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK289366|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK298793|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AB037846|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AL137200|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC008053|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300217|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AF007157|ERI3|79033|ERI1 exoribonuclease family member 3	0.120913	
chr7	32982780	32982906	reg1017403.p1	8.807	+	AF274938 TSC_hg19_v1_chr7_-_32982789 BC050570 BC036907	-139	-	TSC_hg19_v1_chr7_-_32931481 NM_015483	-51392	-	TSC_hg19_v1_chr7_-_32931372 BC037887	-51474	-	TSC_hg19_v1_chr7_+_32997051 NM_007270 AK075331 AK128597 AK300328 AK293954 AK294266 BC101723 BC112053 AF089745	14309	+	BC015856 NM_001166118 NM_016489	97676	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	119479	-	AF274938|RP9P|441212|retinitis pigmentosa 9 pseudogene##BC050570|RP9P|441212|retinitis pigmentosa 9 pseudogene##BC036907|RP9P|441212|retinitis pigmentosa 9 pseudogene##NM_015483|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##BC037887|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##NM_007270|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK075331|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK128597|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK300328|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK293954|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK294266|FKBP9|11328|FK506 binding protein 9, 63 kDa##BC101723|FKBP9|11328|FK506 binding protein 9, 63 kDa##BC112053|FKBP9|11328|FK506 binding protein 9, 63 kDa##AF089745|FKBP9|11328|FK506 binding protein 9, 63 kDa##BC015856|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001166118|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_016489|NT5C3|51251|5'-nucleotidase, cytosolic III##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III	0.330462	CTCF.p2:-4:0.317
chr2	192734142	192734248	reg1014122.p1	8.806	+	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-22224	-	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	-22457	-	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	-191333	+	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	325119	-	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	325434	-	BC029413 NM_001127257 CR749813	3787380	+	AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	0.617884	CTCF.p2:-6:0.599
chr3	101355183	101355280	reg1012004.p1	8.806	+	TSC_hg19_v1_chr3_+_101293044 BC013916 CR627371 BC022001 AB037675 NM_020357 AK025551 AK222978 BC107796 AK314629 AB590038 DQ890799 DQ893953	-62176	+	AK098760 TSC_hg19_v1_chr3_+_101293023	-62226	+	TSC_hg19_v1_chr3_+_101280711 BC035967 AF226052 NM_017819 AK000439 AF086243 AF155111	-74514	+	TSC_hg19_v1_chr3_+_101395273 BC003066 AK022880	40052	+	TSC_hg19_v1_chr3_+_101395318 BC016930	40080	+	TSC_hg19_v1_chr3_-_101395977 BC111700 U69274 BC028062 AK312859 NM_014415	40589	-	BC013916|PCNP|57092|PEST proteolytic signal containing nuclear protein##CR627371|PCNP|57092|PEST proteolytic signal containing nuclear protein##BC022001|PCNP|57092|PEST proteolytic signal containing nuclear protein##AB037675|PCNP|57092|PEST proteolytic signal containing nuclear protein##NM_020357|PCNP|57092|PEST proteolytic signal containing nuclear protein##AK025551|PCNP|57092|PEST proteolytic signal containing nuclear protein##AK222978|PCNP|57092|PEST proteolytic signal containing nuclear protein##BC107796|PCNP|57092|PEST proteolytic signal containing nuclear protein##AK314629|PCNP|57092|PEST proteolytic signal containing nuclear protein##DQ890799|PCNP|57092|PEST proteolytic signal containing nuclear protein##DQ893953|PCNP|57092|PEST proteolytic signal containing nuclear protein##AK098760|PCNP|57092|PEST proteolytic signal containing nuclear protein##BC035967|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF226052|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##NM_017819|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AK000439|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF086243|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF155111|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##BC003066|LOC100009676|100009676|uncharacterized LOC100009676##AK022880|LOC100009676|100009676|uncharacterized LOC100009676##BC016930|LOC100009676|100009676|uncharacterized LOC100009676##BC111700|ZBTB11|27107|zinc finger and BTB domain containing 11##U69274|ZBTB11|27107|zinc finger and BTB domain containing 11##BC028062|ZBTB11|27107|zinc finger and BTB domain containing 11##AK312859|ZBTB11|27107|zinc finger and BTB domain containing 11##NM_014415|ZBTB11|27107|zinc finger and BTB domain containing 11	0.509083	CTCF.p2:18:0.509
chr5	54987727	54987873	reg1016031.p1	8.806	+	BC040295 CU691780 AB000888 BC117133 BC143281 BC168254 TSC_hg19_v1_chr5_-_54830793 AF017116 BC039847 AF014402 AF014403 BC008787 NM_003711 NM_176895	-157132	-	AK291649 AK304788 TSC_hg19_v1_chr5_+_54603828 D29641 BC065258 AB527662	-383966	+	TSC_hg19_v1_chr5_+_54603816 BC104996 BC113509 BC028604	-383994	+	TSC_hg19_v1_chr5_-_55008090 BC101361 BC101362 AK075190	20286	-	TSC_hg19_v1_chr5_-_55008148 AK122957 BC066891 NM_173514	20348	-	NM_001142549 NM_001166533 NM_024415 BC030638 AK308300 AK292417 BC088362 BC047455	46076	+	BC040295|RNF138P1|379013|ring finger protein 138 pseudogene 1##AB000888|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC117133|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC143281|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC168254|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF017116|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC039847|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF014402|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF014403|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC008787|PPAP2A|8611|phosphatidic acid phosphatase type 2A##NM_003711|PPAP2A|8611|phosphatidic acid phosphatase type 2A##NM_176895|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AK291649|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##AK304788|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##D29641|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC065258|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC104996|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC113509|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC028604|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC101361|SLC38A9|153129|solute carrier family 38, member 9##BC101362|SLC38A9|153129|solute carrier family 38, member 9##AK075190|SLC38A9|153129|solute carrier family 38, member 9##AK122957|SLC38A9|153129|solute carrier family 38, member 9##BC066891|SLC38A9|153129|solute carrier family 38, member 9##NM_173514|SLC38A9|153129|solute carrier family 38, member 9##NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	0.995901	CTCF.p2:26:0.996
chr11	122685257	122685361	reg1014623.p1	8.805	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	-158762	+	BC130361 BC130363 AF303179 NM_001001786	-698448	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-1224211	+	BC070266 AK313578 AF001622 NM_019604	23920	+	AK097534 BC068507 NM_024806 NM_199124	68122	+	AB231738 NM_001098169	167047	-	NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63##AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox	0.0	
chr14	31449470	31449578	reg1015688.p1	8.805	+	TSC_hg19_v1_chr14_+_31343764 NM_001135058 NM_004086 AY358900 AF006740 AK292724 BC000640 BC007230 BC018827	-105806	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	-357980	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	-358000	+	NM_001128126 NM_007077	45158	+	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	46046	-	TSC_hg19_v1_chr14_-_31676690 NM_015382	227161	-	NM_001135058|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_004086|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AY358900|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AF006740|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AK292724|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC000640|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC007230|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC018827|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##NM_001128126|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##NM_007077|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3##NM_015382|HECTD1|25831|HECT domain containing 1	0.967992	CTCF.p2:-3:0.968
chr17	25524697	25524794	reg1014697.p1	8.805	+	NM_001190452	-3502309	+	TSC_hg19_v1_chr17_-_21454933 AK056436 BC132738 BC136630 BC019938 BC010612 BC052777 BC053952 NM_001113434	-4069822	-	FJ434338 NM_001194958	-4216298	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	96377	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	96536	+	BC035488 BC042106 NM_014238	274284	+	NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##AK056436|C17orf51|339263|chromosome 17 open reading frame 51##BC132738|C17orf51|339263|chromosome 17 open reading frame 51##BC136630|C17orf51|339263|chromosome 17 open reading frame 51##BC019938|C17orf51|339263|chromosome 17 open reading frame 51##BC010612|C17orf51|339263|chromosome 17 open reading frame 51##BC052777|C17orf51|339263|chromosome 17 open reading frame 51##BC053952|C17orf51|339263|chromosome 17 open reading frame 51##NM_001113434|C17orf51|339263|chromosome 17 open reading frame 51##FJ434338|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##NM_001194958|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1	0.80299	CTCF.p2:-3:0.803
chr17	4207827	4207971	reg1016850.p1	8.805	+	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	-40748	-	TSC_hg19_v1_chr17_+_4046995 AK313088 AK172844 BC020263 CU690822 DQ891696 DQ894877	-160890	+	TSC_hg19_v1_chr17_+_4046490 NM_144611 BC051697	-161416	+	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	61812	-	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	62009	-	AK172832 NM_182538 TSC_hg19_v1_chr17_+_4337247 BC023646	129343	+	AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK313088|CYB5D2|124936|cytochrome b5 domain containing 2##AK172844|CYB5D2|124936|cytochrome b5 domain containing 2##BC020263|CYB5D2|124936|cytochrome b5 domain containing 2##DQ891696|CYB5D2|124936|cytochrome b5 domain containing 2##DQ894877|CYB5D2|124936|cytochrome b5 domain containing 2##NM_144611|CYB5D2|124936|cytochrome b5 domain containing 2##BC051697|CYB5D2|124936|cytochrome b5 domain containing 2##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AK172832|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_182538|SPNS3|201305|spinster homolog 3 (Drosophila)##BC023646|SPNS3|201305|spinster homolog 3 (Drosophila)	0.987055	CTCF.p2:9:0.987
chr7	113338791	113338909	reg1013311.p2	8.805	+	TSC_hg19_v1_chr7_-_112758613 BC107860	-580221	-	TSC_hg19_v1_chr7_-_112758606 BC065765 BX537645	-580244	-	NM_001146265 NM_018970 TSC_hg19_v1_chr7_-_112727844	-611010	-	X78578 AF024579 HQ258594 BC070313 BC056666 NM_002711 BC126451 BC126453	220233	-	TSC_hg19_v1_chr7_+_113726381 AK131266	387571	+	TSC_hg19_v1_chr7_+_113726514 AF454830	387653	+	BC107860|LOC401397|401397|uncharacterized LOC401397##BC065765|LOC401397|401397|uncharacterized LOC401397##BX537645|LOC401397|401397|uncharacterized LOC401397##NM_001146265|GPR85|54329|G protein-coupled receptor 85##NM_018970|GPR85|54329|G protein-coupled receptor 85##X78578|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AF024579|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##HQ258594|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC070313|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC056666|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##NM_002711|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126451|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126453|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AK131266|FOXP2|93986|forkhead box P2##AF454830|FOXP2|93986|forkhead box P2	0.993346	CTCF.p2:-2:0.993
chr13	100269756	100269860	reg1013837.p1	8.804	+	TSC_hg19_v1_chr13_+_100258943 NM_206808 AK300510 BC034360 AK095506 AF428253 CU689862	-10888	+	BC041830 TSC_hg19_v1_chr13_+_100229390	-40431	+	TSC_hg19_v1_chr13_+_100153777 BC130293	-116026	+	AF378304 NM_033132	354361	-	TSC_hg19_v1_chr13_+_100633453 AK298232	363647	+	TSC_hg19_v1_chr13_+_100634037 NM_007129	364212	+	NM_206808|CLYBL|171425|citrate lyase beta like##AK300510|CLYBL|171425|citrate lyase beta like##BC034360|CLYBL|171425|citrate lyase beta like##AK095506|CLYBL|171425|citrate lyase beta like##AF428253|CLYBL|171425|citrate lyase beta like##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2##AF378304|ZIC5|85416|Zic family member 5##NM_033132|ZIC5|85416|Zic family member 5##NM_007129|ZIC2|7546|Zic family member 2	0.035199	
chrX	55868921	55869099	reg1015560.p2	8.804	+	TSC_hg19_v1_chrX_+_55744181 NM_006064 NM_016656 AL831926 AK289407 BC034726 X90530	-124822	+	BC012934 NM_198451	-219178	+	NM_201286 BC035907	-353378	-	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	389900	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	721041	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	886681	+	NM_006064|RRAGB|10325|Ras-related GTP binding B##NM_016656|RRAGB|10325|Ras-related GTP binding B##AL831926|RRAGB|10325|Ras-related GTP binding B##AK289407|RRAGB|10325|Ras-related GTP binding B##BC034726|RRAGB|10325|Ras-related GTP binding B##X90530|RRAGB|10325|Ras-related GTP binding B##BC012934|FOXR2|139628|forkhead box R2##NM_198451|FOXR2|139628|forkhead box R2##NM_201286|USP51|158880|ubiquitin specific peptidase 51##BC035907|USP51|158880|ubiquitin specific peptidase 51##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643	0.36439	CTCF.p2:-43:0.364
chr12	29226709	29226825	reg1014798.p1	8.803	+	AY289196 NM_018318 AB587421	-816627	+	TSC_hg19_v1_chr12_+_28343404 BC035168	-883356	+	NM_002820 NM_198965	-1101852	-	AL136843 TSC_hg19_v1_chr12_+_29302210 AK001324 AK314670 BC018460	75425	+	TSC_hg19_v1_chr12_+_29376598 BC022267 NM_018099 AK027756 AK129857 AK001927	149904	+	TSC_hg19_v1_chr12_-_29534081 BC064522	307308	-	AY289196|CCDC91|55297|coiled-coil domain containing 91##NM_018318|CCDC91|55297|coiled-coil domain containing 91##NM_002820|PTHLH|5744|parathyroid hormone-like hormone##NM_198965|PTHLH|5744|parathyroid hormone-like hormone##AL136843|FAR2|55711|fatty acyl CoA reductase 2##AK001324|FAR2|55711|fatty acyl CoA reductase 2##AK314670|FAR2|55711|fatty acyl CoA reductase 2##BC022267|FAR2|55711|fatty acyl CoA reductase 2##NM_018099|FAR2|55711|fatty acyl CoA reductase 2##AK027756|FAR2|55711|fatty acyl CoA reductase 2##AK129857|FAR2|55711|fatty acyl CoA reductase 2##AK001927|FAR2|55711|fatty acyl CoA reductase 2##BC064522|ERGIC2|51290|ERGIC and golgi 2	0.0	
chr17	26743964	26744083	reg1016486.p1	8.803	+	AK295883 TSC_hg19_v1_chr17_-_26733231 BC010691 AK054669 NM_001242366 NM_080669	-10808	-	TSC_hg19_v1_chr17_+_26711666 AK093615	-32269	+	TSC_hg19_v1_chr17_+_26699093 BC040429 AJ290445 BC122860	-44914	+	CU678258 TSC_hg19_v1_chr17_+_26794963	50880	+	TSC_hg19_v1_chr17_+_26800661 AK314684 NM_001145975 NM_001145976 NM_003984 U26209 BC096276 BC096277 BC096278 BC096279 AK091926 AK298388 AK303909 AK303936	56683	+	NM_003593 Y11739	106935	+	AK295883|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##BC010691|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##AK054669|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##NM_001242366|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##NM_080669|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##AK093615|SARM1|23098|sterile alpha and TIR motif containing 1##BC040429|SARM1|23098|sterile alpha and TIR motif containing 1##AJ290445|SARM1|23098|sterile alpha and TIR motif containing 1##BC122860|SARM1|23098|sterile alpha and TIR motif containing 1##AK314684|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145975|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145976|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_003984|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##U26209|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096276|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096277|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096278|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096279|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK091926|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK298388|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303909|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303936|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_003593|FOXN1|8456|forkhead box N1##Y11739|FOXN1|8456|forkhead box N1	0.24309	CTCF.p2:0:0.243
chr2	12856199	12856309	reg1015598.p1	8.803	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-969479	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-1045963	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-1173411	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	999	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	1662	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	2143	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.060533	
chr22	50118607	50118739	reg1016588.p1	8.803	+	AK124962 TSC_hg19_v1_chr22_-_50051168 BC033837 BC048207	-67540	-	AK125256 NM_015381 AK123443 AY358847	-1146512	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	-1233393	+	AF005067 NM_014577	99778	-	AK292428 TSC_hg19_v1_chr22_-_50221332 BC030007 BC047508	102593	-	TSC_hg19_v1_chr22_-_50221517 AK304776	102808	-	AK124962|C22orf34|348645|chromosome 22 open reading frame 34##BC048207|C22orf34|348645|chromosome 22 open reading frame 34##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF005067|BRD1|23774|bromodomain containing 1##NM_014577|BRD1|23774|bromodomain containing 1##AK292428|BRD1|23774|bromodomain containing 1##BC030007|BRD1|23774|bromodomain containing 1##BC047508|BRD1|23774|bromodomain containing 1##AK304776|BRD1|23774|bromodomain containing 1	0.024965	
chr9	99429200	99429296	reg1011426.p2	8.803	+	TSC_hg19_v1_chr9_-_99417600 BC136501 BC136503 NM_153698	-11638	-	TSC_hg19_v1_chr9_-_99382126 AF064104 AF064105 NM_003671 NM_033331	-47128	-	TSC_hg19_v1_chr9_-_99329110 AK126388 NM_001077181	-100101	-	AB023189 NM_014930 TSC_hg19_v1_chr9_-_99540352 BC036676 BC068587 BC058022 AK292600	111105	-	BC137073 AK131468 NM_001001662	187138	-	NM_001045477 NM_001170741	262037	+	BC136501|C9orf21|195827|chromosome 9 open reading frame 21##BC136503|C9orf21|195827|chromosome 9 open reading frame 21##NM_153698|C9orf21|195827|chromosome 9 open reading frame 21##AF064104|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##AF064105|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_003671|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_033331|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##AB023189|ZNF510|22869|zinc finger protein 510##NM_014930|ZNF510|22869|zinc finger protein 510##BC036676|ZNF510|22869|zinc finger protein 510##BC068587|ZNF510|22869|zinc finger protein 510##BC058022|ZNF510|22869|zinc finger protein 510##AK292600|ZNF510|22869|zinc finger protein 510##BC137073|ZNF782|158431|zinc finger protein 782##AK131468|ZNF782|158431|zinc finger protein 782##NM_001001662|ZNF782|158431|zinc finger protein 782##NM_001045477|FAM22G|441457|family with sequence similarity 22, member G##NM_001170741|FAM22G|441457|family with sequence similarity 22, member G	0.539565	CTCF.p2:23:0.540
chr13	33155447	33155582	reg1014748.p2	8.802	+	Z36834 TSC_hg19_v1_chr13_-_33112933 BC010643 U50532 AL049783 AK298546 AK312924 NM_014887 NM_033111	-42589	-	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	-153156	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	-265897	+	TSC_hg19_v1_chr13_+_33160588 NM_015032	5049	+	TSC_hg19_v1_chr13_+_33160610 AL137201	5104	+	TSC_hg19_v1_chr13_+_33160649 AB023196	5125	+	Z36834|N4BP2L2|10443|NEDD4 binding protein 2-like 2##BC010643|N4BP2L2|10443|NEDD4 binding protein 2-like 2##U50532|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AL049783|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK298546|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK312924|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_014887|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_033111|N4BP2L2|10443|NEDD4 binding protein 2-like 2##BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##NM_015032|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.994189	CTCF.p2:6:0.994
chr17	72529309	72529419	reg1012100.p2	8.802	+	TSC_hg19_v1_chr17_-_72527597 DQ893585 DQ896833 BC028091 AK290925 AK298665 NM_174892	-1762	-	AF427618 AY359025 TSC_hg19_v1_chr17_-_72527570 AY646929	-1821	-	TSC_hg19_v1_chr17_+_72462821 AF161346 AJ010101 AJ010102 AJ010103 AJ238323 AK309636 BC020681 AB590938 CU689350	-66554	+	X66171 TSC_hg19_v1_chr17_-_72542230	12825	-	TSC_hg19_v1_chr17_-_72542250 BC022279 NM_006678	12898	-	AK056444 NM_152460	51692	+	DQ893585|CD300LB|124599|CD300 molecule-like family member b##DQ896833|CD300LB|124599|CD300 molecule-like family member b##BC028091|CD300LB|124599|CD300 molecule-like family member b##AK290925|CD300LB|124599|CD300 molecule-like family member b##AK298665|CD300LB|124599|CD300 molecule-like family member b##NM_174892|CD300LB|124599|CD300 molecule-like family member b##AF427618|CD300LB|124599|CD300 molecule-like family member b##AY359025|CD300LB|124599|CD300 molecule-like family member b##AY646929|CD300LB|124599|CD300 molecule-like family member b##AF161346|CD300A|11314|CD300a molecule##AJ010101|CD300A|11314|CD300a molecule##AJ010102|CD300A|11314|CD300a molecule##AJ010103|CD300A|11314|CD300a molecule##AJ238323|CD300A|11314|CD300a molecule##AK309636|CD300A|11314|CD300a molecule##BC020681|CD300A|11314|CD300a molecule##X66171|CD300C|10871|CD300c molecule##BC022279|CD300C|10871|CD300c molecule##NM_006678|CD300C|10871|CD300c molecule##AK056444|C17orf77|146723|chromosome 17 open reading frame 77##NM_152460|C17orf77|146723|chromosome 17 open reading frame 77	0.789846	CTCF.p2:25:0.790
chr2	162948309	162948454	reg1017322.p1	8.802	+	BC065265 NM_001935 TSC_hg19_v1_chr2_-_162931062	-17325	-	TSC_hg19_v1_chr2_-_162930636 AK314798	-17749	-	TSC_hg19_v1_chr2_-_162930585 X60708	-17804	-	NM_002054	60532	-	BC026250 AF007822 U76833 AK315448 AK309260 AK297118 NM_004460 U09278	151579	-	CU692330 BC111750 AY017378 AF095844 NM_022168 BC078180 TSC_hg19_v1_chr2_-_163175195 BC046208 AK292941 AK314611	226702	-	BC065265|DPP4|1803|dipeptidyl-peptidase 4##NM_001935|DPP4|1803|dipeptidyl-peptidase 4##AK314798|DPP4|1803|dipeptidyl-peptidase 4##X60708|DPP4|1803|dipeptidyl-peptidase 4##NM_002054|GCG|2641|glucagon##BC026250|FAP|2191|fibroblast activation protein, alpha##AF007822|FAP|2191|fibroblast activation protein, alpha##U76833|FAP|2191|fibroblast activation protein, alpha##AK315448|FAP|2191|fibroblast activation protein, alpha##AK309260|FAP|2191|fibroblast activation protein, alpha##AK297118|FAP|2191|fibroblast activation protein, alpha##NM_004460|FAP|2191|fibroblast activation protein, alpha##U09278|FAP|2191|fibroblast activation protein, alpha##BC111750|IFIH1|64135|interferon induced with helicase C domain 1##AY017378|IFIH1|64135|interferon induced with helicase C domain 1##AF095844|IFIH1|64135|interferon induced with helicase C domain 1##NM_022168|IFIH1|64135|interferon induced with helicase C domain 1##BC078180|IFIH1|64135|interferon induced with helicase C domain 1##BC046208|IFIH1|64135|interferon induced with helicase C domain 1##AK292941|IFIH1|64135|interferon induced with helicase C domain 1##AK314611|IFIH1|64135|interferon induced with helicase C domain 1	0.013941	
chr3	114759663	114759793	reg1016941.p1	8.802	+	AK225788 NM_001164344 NM_001164345	-281608	-	AK315307 NM_001164346 TSC_hg19_v1_chr3_-_114343793	-415934	-	BC029041 NM_001164347	-416676	-	BC090936 NM_001164343	30512	-	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	106386	-	NM_001130064 NM_002045	582422	+	AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20##BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20##BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20##BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43	0.969863	CTCF.p2:-5:0.970
chr5	39547770	39547898	reg1016930.p1	8.802	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-122517	-	TSC_hg19_v1_chr5_-_39425082 AK314381	-122770	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	-122883	-	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	1132193	+	TSC_hg19_v1_chr5_+_40680042 L25124	1132210	+	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	1208206	-	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33	0.619919	CTCF.p2:9:0.620
chr8	90738148	90738277	reg1014525.p1	8.802	+	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	-1398466	-	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	-1851953	-	AK093121 AX747937 BC117326 BC117328 NM_173538	-2859539	+	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	31818	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	32072	+	AF061326 NM_004337	175883	+	AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF061326|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_004337|OSGIN2|734|oxidative stress induced growth inhibitor family member 2	0.036163	
chr5	54990148	54990261	reg1015045.p2	8.801	+	BC040295 CU691780 AB000888 BC117133 BC143281 BC168254 TSC_hg19_v1_chr5_-_54830793 AF017116 BC039847 AF014402 AF014403 BC008787 NM_003711 NM_176895	-159536	-	AK291649 AK304788 TSC_hg19_v1_chr5_+_54603828 D29641 BC065258 AB527662	-386370	+	TSC_hg19_v1_chr5_+_54603816 BC104996 BC113509 BC028604	-386398	+	TSC_hg19_v1_chr5_-_55008090 BC101361 BC101362 AK075190	17882	-	TSC_hg19_v1_chr5_-_55008148 AK122957 BC066891 NM_173514	17944	-	NM_001142549 NM_001166533 NM_024415 BC030638 AK308300 AK292417 BC088362 BC047455	43672	+	BC040295|RNF138P1|379013|ring finger protein 138 pseudogene 1##AB000888|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC117133|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC143281|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC168254|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF017116|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC039847|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF014402|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF014403|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC008787|PPAP2A|8611|phosphatidic acid phosphatase type 2A##NM_003711|PPAP2A|8611|phosphatidic acid phosphatase type 2A##NM_176895|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AK291649|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##AK304788|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##D29641|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC065258|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC104996|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC113509|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC028604|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC101361|SLC38A9|153129|solute carrier family 38, member 9##BC101362|SLC38A9|153129|solute carrier family 38, member 9##AK075190|SLC38A9|153129|solute carrier family 38, member 9##AK122957|SLC38A9|153129|solute carrier family 38, member 9##BC066891|SLC38A9|153129|solute carrier family 38, member 9##NM_173514|SLC38A9|153129|solute carrier family 38, member 9##NM_001142549|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##NM_001166533|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##NM_024415|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##BC030638|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##AK308300|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##AK292417|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##BC088362|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##BC047455|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	0.814216	CTCF.p2:-2:0.814
chr14	96032631	96032776	reg1016904.p1	8.800	+	TSC_hg19_v1_chr14_+_96001402 DQ083331	-31270	+	AB223038 TSC_hg19_v1_chr14_+_96001383	-31320	+	TSC_hg19_v1_chr14_+_96001362 BX248075 BC023528 BC047680	-31335	+	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	120075	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	147764	-	AK023027 TSC_hg19_v1_chr14_+_96342762	310042	+	DQ083331|GLRX5|51218|glutaredoxin 5##AB223038|GLRX5|51218|glutaredoxin 5##BX248075|GLRX5|51218|glutaredoxin 5##BC023528|GLRX5|51218|glutaredoxin 5##BC047680|GLRX5|51218|glutaredoxin 5##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##AK023027|LOC100507043|100507043|uncharacterized LOC100507043	0.040271	
chr4	22131213	22131340	reg1016518.p1	8.800	+	NM_147182 TSC_hg19_v1_chr4_-_21950396	-180892	-	BX648990 DQ148490 NM_001035003	-431959	-	DQ148491 NM_001035004	-584998	-	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	386278	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	563316	+	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	1760377	-	NM_147182|KCNIP4|80333|Kv channel interacting protein 4##BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##DQ148491|KCNIP4|80333|Kv channel interacting protein 4##NM_001035004|KCNIP4|80333|Kv channel interacting protein 4##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	0.970091	CTCF.p2:-2:0.970
chr6	56460411	56460573	reg1015268.p2	8.800	+	BC038763 TSC_hg19_v1_chr6_-_56407722	-52784	-	AF330693 TSC_hg19_v1_chr6_-_56258945	-201568	-	TSC_hg19_v1_chr6_-_56112350 BC045597 AF414088 AL136624 AK313398 NM_030820	-348131	-	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	47147	-	TSC_hg19_v1_chr6_-_56708446 U31850	247980	-	AK294830 TSC_hg19_v1_chr6_-_56716493	255960	-	AF330693|COL21A1|81578|collagen, type XXI, alpha 1##BC045597|COL21A1|81578|collagen, type XXI, alpha 1##AF414088|COL21A1|81578|collagen, type XXI, alpha 1##AL136624|COL21A1|81578|collagen, type XXI, alpha 1##AK313398|COL21A1|81578|collagen, type XXI, alpha 1##NM_030820|COL21A1|81578|collagen, type XXI, alpha 1##AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin##U31850|DST|667|dystonin##AK294830|DST|667|dystonin	0.99017	CTCF.p2:2:0.990
chr12	119417705	119417823	reg1013806.p2	8.799	+	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	-603362	+	TSC_hg19_v1_chr12_-_118810713 NM_016281	-607034	-	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	-607136	-	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	1583	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	198915	+	BC040553 NM_178499	354752	+	BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_016281|TAOK3|51347|TAO kinase 3##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60	0.972252	CTCF.p2:-6:0.972
chr17	52968714	52968844	reg1016278.p1	8.798	+	NM_032559 AK057272 AF333335 BC033802 AK302262 AK308265 CU689754	-1068464	+	NM_001243552	-1905900	+	BC029865 TSC_hg19_v1_chr17_-_50237384 AF288385 NM_001082534	-2731416	-	TSC_hg19_v1_chr17_+_52978217 NM_005486 AK001893 AK309164 AK225351 AJ010071 AK303912 AK300823 AK303913 AK315039 AK315907 AK223125 BC029396 AB590855	9377	+	TSC_hg19_v1_chr17_-_53046016 AK293851 CR541837 DQ893136 DQ896418 AF044321 BC005895 AK295381 NM_001162861 NM_001162862 NM_004375	77238	-	TSC_hg19_v1_chr17_+_53046125 AK122865 NM_178509 BC125116 BC041485	77348	+	NM_032559|KIF2B|84643|kinesin family member 2B##AK057272|KIF2B|84643|kinesin family member 2B##AF333335|KIF2B|84643|kinesin family member 2B##BC033802|KIF2B|84643|kinesin family member 2B##AK302262|KIF2B|84643|kinesin family member 2B##NM_001243552|LOC100506650|100506650|uncharacterized LOC100506650##BC029865|CA10|56934|carbonic anhydrase X##AF288385|CA10|56934|carbonic anhydrase X##NM_001082534|CA10|56934|carbonic anhydrase X##NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1##AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1##AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1##AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1##AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1##AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1##AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1##BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1##AK293851|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##CR541837|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##DQ893136|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##DQ896418|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AF044321|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##BC005895|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AK295381|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_001162861|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_001162862|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_004375|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AK122865|STXBP4|252983|syntaxin binding protein 4##NM_178509|STXBP4|252983|syntaxin binding protein 4##BC125116|STXBP4|252983|syntaxin binding protein 4##BC041485|STXBP4|252983|syntaxin binding protein 4	0.357983	CTCF.p2:6:0.358
chr19	2962193	2962340	reg1014282.p1	8.798	+	TSC_hg19_v1_chr19_-_2944927 AK290979 BC043354 BC062561 NM_021217	-17323	-	EF534355 NM_173480 TSC_hg19_v1_chr19_+_2900954 BX537601 BC028974 AK314848	-61331	+	AK021699 AK225297 NM_024967 BC009374	-94924	+	TSC_hg19_v1_chr19_+_2977532 NM_001143986 NM_024760 AK024071 BC013986 BC020206 BC007329 BC068052	15300	+	CU675966 AK308608 M99436 AK312285 BC017364 AK303102 NM_003260 TSC_hg19_v1_chr19_-_3029294	66833	-	AK293407 NM_001144762	67345	-	AK290979|ZNF77|58492|zinc finger protein 77##BC043354|ZNF77|58492|zinc finger protein 77##BC062561|ZNF77|58492|zinc finger protein 77##NM_021217|ZNF77|58492|zinc finger protein 77##EF534355|ZNF57|126295|zinc finger protein 57##NM_173480|ZNF57|126295|zinc finger protein 57##BX537601|ZNF57|126295|zinc finger protein 57##BC028974|ZNF57|126295|zinc finger protein 57##AK314848|ZNF57|126295|zinc finger protein 57##AK021699|ZNF556|80032|zinc finger protein 556##AK225297|ZNF556|80032|zinc finger protein 556##NM_024967|ZNF556|80032|zinc finger protein 556##BC009374|ZNF556|80032|zinc finger protein 556##NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##AK308608|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##M99436|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##AK312285|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##BC017364|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##AK303102|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##NM_003260|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##AK293407|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##NM_001144762|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)	0.978122	CTCF.p2:-10:0.978
chr2	33171434	33171563	reg1015295.p1	8.798	+	NM_001193509 NM_017735 AK299196 BC063791 TSC_hg19_v1_chr2_+_32853177 AK027570	-318364	+	TSC_hg19_v1_chr2_+_32582308 AF265555	-589188	+	TSC_hg19_v1_chr2_+_32582131 NM_016252	-589385	+	NM_206943	870	+	TSC_hg19_v1_chr2_+_33359657 NM_000627 NM_001166264 NM_001166265 NM_001166266 AB208801 BC130289 BC144127 BC144128 M34057 AB384737 AF489528	188207	+	AK125551 TSC_hg19_v1_chr2_+_33661417 BC027849 NM_170672 AK292983	489950	+	NM_001193509|TTC27|55622|tetratricopeptide repeat domain 27##NM_017735|TTC27|55622|tetratricopeptide repeat domain 27##AK299196|TTC27|55622|tetratricopeptide repeat domain 27##BC063791|TTC27|55622|tetratricopeptide repeat domain 27##AK027570|TTC27|55622|tetratricopeptide repeat domain 27##AF265555|BIRC6|57448|baculoviral IAP repeat containing 6##NM_016252|BIRC6|57448|baculoviral IAP repeat containing 6##NM_206943|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1##AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1##M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1##AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1##AK125551|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC027849|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_170672|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK292983|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)	0.940133	CTCF.p2:-5:0.940
chr7	66836927	66837054	reg1014859.p2	8.798	+	TSC_hg19_v1_chr7_+_66767656 BC026058	-69333	+	TSC_hg19_v1_chr7_+_66767642 AK307290	-69342	+	TSC_hg19_v1_chr7_+_66767639 AK023257 AK308931	-69382	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	2226846	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	2227339	+	TSC_hg19_v1_chr7_+_69064580 BC011643	2227598	+	BC026058|STAG3L4|64940|stromal antigen 3-like 4##AK307290|STAG3L4|64940|stromal antigen 3-like 4##AK023257|STAG3L4|64940|stromal antigen 3-like 4##AK308931|STAG3L4|64940|stromal antigen 3-like 4##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2	0.897561	CTCF.p2:-18:0.898
chr11	107670089	107670203	reg1009638.p1	8.797	+	BC104185 BC113930 BC113987 BC104150 BC094685 AK312097 BC005261 U96094 NM_003063	-87387	-	TSC_hg19_v1_chr11_+_107462073 BC028725	-208070	+	TSC_hg19_v1_chr11_+_107461998 AK303689 AK054794	-208161	+	CU691672 TSC_hg19_v1_chr11_-_107729514 AK023080 BC048302	59359	-	AK300582 TSC_hg19_v1_chr11_-_107729530 BC039195	59442	-	NM_017515	59767	-	BC104185|SLN|6588|sarcolipin##BC113930|SLN|6588|sarcolipin##BC113987|SLN|6588|sarcolipin##BC104150|SLN|6588|sarcolipin##BC094685|SLN|6588|sarcolipin##AK312097|SLN|6588|sarcolipin##BC005261|SLN|6588|sarcolipin##U96094|SLN|6588|sarcolipin##NM_003063|SLN|6588|sarcolipin##BC028725|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK303689|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK054794|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK023080|SLC35F2|54733|solute carrier family 35, member F2##BC048302|SLC35F2|54733|solute carrier family 35, member F2##AK300582|SLC35F2|54733|solute carrier family 35, member F2##BC039195|SLC35F2|54733|solute carrier family 35, member F2##NM_017515|SLC35F2|54733|solute carrier family 35, member F2	0.0	
chr11	131781471	131781568	reg1015321.p1	8.797	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-180	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-895	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-541050	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	1031495	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	1032086	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	1620795	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.282048	CTCF.p2:18:0.253
chr12	108905846	108905960	reg1014163.p2	8.796	+	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	-172819	-	NM_001142345	-191465	-	BC110330 AB018332 NM_014653	-382416	+	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	3179	+	AB385287 D63879 TSC_hg19_v1_chr12_-_108954936 BC103706 BC093784 BC111983 BC143253 BC004547 BC024279 AB020880 AF387506 BC032601	49031	-	TSC_hg19_v1_chr12_-_108954945 AK225174 AK304834	49043	-	U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing##D63879|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC103706|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC093784|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC111983|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC143253|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC004547|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC024279|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AB020880|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AF387506|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC032601|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK225174|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK304834|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3	0.999967	CTCF.p2:2:1.000
chr2	61886107	61886275	reg1014203.p1	8.796	+	TSC_hg19_v1_chr2_-_61765394 BX647758 NM_003400	-120786	-	TSC_hg19_v1_chr2_-_61765383 BC032847 CR749840	-120812	-	TSC_hg19_v1_chr2_-_61765358 AL833550	-120836	-	BC107162 BC107163 AK310908 AB527366 AM392542 AM392832 AM393518 TSC_hg19_v1_chr2_-_62081180 BX648834 BX649029 AK023367 BC036448 NM_001201543 NM_032180	194972	-	U38846 EU446763 AB385091 TSC_hg19_v1_chr2_-_62115685 AK294665	229473	-	AK129860 TSC_hg19_v1_chr2_-_62115719 AK295330	229527	-	BX647758|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##NM_003400|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC032847|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##CR749840|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##AL833550|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC107162|FAM161A|84140|family with sequence similarity 161, member A##BC107163|FAM161A|84140|family with sequence similarity 161, member A##AK310908|FAM161A|84140|family with sequence similarity 161, member A##AM392542|FAM161A|84140|family with sequence similarity 161, member A##AM392832|FAM161A|84140|family with sequence similarity 161, member A##AM393518|FAM161A|84140|family with sequence similarity 161, member A##BX648834|FAM161A|84140|family with sequence similarity 161, member A##BX649029|FAM161A|84140|family with sequence similarity 161, member A##AK023367|FAM161A|84140|family with sequence similarity 161, member A##BC036448|FAM161A|84140|family with sequence similarity 161, member A##NM_001201543|FAM161A|84140|family with sequence similarity 161, member A##NM_032180|FAM161A|84140|family with sequence similarity 161, member A##U38846|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##EU446763|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK294665|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK129860|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK295330|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)	0.999108	CTCF.p2:19:0.999
chr4	5401676	5401786	reg1014155.p1	8.796	+	TSC_hg19_v1_chr4_+_5053464 AJ250839 NM_018401 BC038238 AB528925 DQ890554 DQ893714	-348204	+	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	-348451	+	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	-380585	-	D82070 NM_005750 BC117444 BC117446 HQ258562	125238	+	AY185210 NM_147127 TSC_hg19_v1_chr4_-_5710299	308569	-	AY152402 AY152403 NM_001166136	309543	-	AJ250839|STK32B|55351|serine/threonine kinase 32B##NM_018401|STK32B|55351|serine/threonine kinase 32B##BC038238|STK32B|55351|serine/threonine kinase 32B##DQ890554|STK32B|55351|serine/threonine kinase 32B##DQ893714|STK32B|55351|serine/threonine kinase 32B##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##D82070|C4orf6|10141|chromosome 4 open reading frame 6##NM_005750|C4orf6|10141|chromosome 4 open reading frame 6##BC117444|C4orf6|10141|chromosome 4 open reading frame 6##BC117446|C4orf6|10141|chromosome 4 open reading frame 6##HQ258562|C4orf6|10141|chromosome 4 open reading frame 6##AY185210|EVC2|132884|Ellis van Creveld syndrome 2##NM_147127|EVC2|132884|Ellis van Creveld syndrome 2##AY152402|EVC2|132884|Ellis van Creveld syndrome 2##AY152403|EVC2|132884|Ellis van Creveld syndrome 2##NM_001166136|EVC2|132884|Ellis van Creveld syndrome 2	0.034732	
chr5	140809999	140810157	reg1015343.p1	8.796	+	AY358946 TSC_hg19_v1_chr5_+_140810073	-58	+	TSC_hg19_v1_chr5_+_140800620 BC136781 BC171774 AF152320 AF152504 AF152505	-9375	+	NM_018914 NM_032091 NM_032092 TSC_hg19_v1_chr5_+_140800602	-9509	+	TSC_hg19_v1_chr5_+_140810137 NM_003735 NM_032094	69	+	TSC_hg19_v1_chr5_+_140810181 AB011160	115	+	AF152321 AF152506 TSC_hg19_v1_chr5_+_140810427	318	+	AY358946|PCDHGA12|26025|protocadherin gamma subfamily A, 12##BC136781|PCDHGA11|56105|protocadherin gamma subfamily A, 11##BC171774|PCDHGA11|56105|protocadherin gamma subfamily A, 11##AF152320|PCDHGA11|56105|protocadherin gamma subfamily A, 11##AF152504|PCDHGA11|56105|protocadherin gamma subfamily A, 11##AF152505|PCDHGA11|56105|protocadherin gamma subfamily A, 11##NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11##NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11##NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11##NM_003735|PCDHGA12|26025|protocadherin gamma subfamily A, 12##NM_032094|PCDHGA12|26025|protocadherin gamma subfamily A, 12##AB011160|PCDHGA12|26025|protocadherin gamma subfamily A, 12##AF152321|PCDHGA12|26025|protocadherin gamma subfamily A, 12##AF152506|PCDHGA12|26025|protocadherin gamma subfamily A, 12	0.670407	CTCF.p2:-51:0.670
chr11	65902092	65902245	reg1014140.p1	8.795	+	TSC_hg19_v1_chr11_+_65837841 AK096644 NM_018026 AK098336 AY320283 BC010096 BC052577	-64258	+	TSC_hg19_v1_chr11_+_65819834 NM_006842 AK290850 BC010372 BC053577 BX537771 AB463285 BC000401 U41371	-82328	+	AB053232 NM_033036	-85518	-	TSC_hg19_v1_chr11_+_65984213 AB033001	82054	+	TSC_hg19_v1_chr11_+_65988172 BC055288	86027	+	AK293966 TSC_hg19_v1_chr11_+_65998046 BC042909	95807	+	AK096644|PACS1|55690|phosphofurin acidic cluster sorting protein 1##NM_018026|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AK098336|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AY320283|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC010096|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC052577|PACS1|55690|phosphofurin acidic cluster sorting protein 1##NM_006842|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##AK290850|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BC053577|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BX537771|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BC000401|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##U41371|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##AB053232|GAL3ST3|89792|galactose-3-O-sulfotransferase 3##NM_033036|GAL3ST3|89792|galactose-3-O-sulfotransferase 3##AB033001|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC055288|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AK293966|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC042909|PACS1|55690|phosphofurin acidic cluster sorting protein 1	0.992911	CTCF.p2:28:0.993
chr1	45121351	45121480	reg1016130.p1	8.795	+	TSC_hg19_v1_chr1_+_45097700 AK296038 AK225180	-23653	+	AK056424 TSC_hg19_v1_chr1_+_44870926 BC034221 NM_018150	-250473	+	TSC_hg19_v1_chr1_-_44820942 AK026596	-300454	-	CR457348 AK026006 AK225405 TSC_hg19_v1_chr1_-_45140099 BC064520 NM_024587 AL832539	18672	-	AK296548 TSC_hg19_v1_chr1_-_45140143 BC007521	18733	-	BC026115 NM_001145636	18978	+	AK296038|RNF220|55182|ring finger protein 220##AK225180|RNF220|55182|ring finger protein 220##AK056424|RNF220|55182|ring finger protein 220##BC034221|RNF220|55182|ring finger protein 220##NM_018150|RNF220|55182|ring finger protein 220##AK026596|ERI3|79033|ERI1 exoribonuclease family member 3##CR457348|TMEM53|79639|transmembrane protein 53##AK026006|TMEM53|79639|transmembrane protein 53##AK225405|TMEM53|79639|transmembrane protein 53##BC064520|TMEM53|79639|transmembrane protein 53##NM_024587|TMEM53|79639|transmembrane protein 53##AL832539|TMEM53|79639|transmembrane protein 53##AK296548|TMEM53|79639|transmembrane protein 53##BC007521|TMEM53|79639|transmembrane protein 53##BC026115|C1orf228|339541|chromosome 1 open reading frame 228##NM_001145636|C1orf228|339541|chromosome 1 open reading frame 228	0.847635	CTCF.p2:-12:0.802
chr17	33469335	33469437	reg1014287.p1	8.795	+	AB209111 BC002884 TSC_hg19_v1_chr17_-_33469323 BC012075 AK303253 AK001320 AK304508 NM_001014445 NM_018096	-66	-	AK313775 NM_017559 BC024002 AK225743 AL133054 EU831600 EU831687	-20732	+	TSC_hg19_v1_chr17_-_33446880 NM_001142571 NM_002878 NM_133629	-22511	-	AK095929 BX647642 NM_001033576 NM_173167 AL832355 AL833281	5461	+	AK097473 BC136422 BC140700 NM_152462	52007	-	TSC_hg19_v1_chr17_+_33570090 NM_144975 AK303632 BX647942 AK054668 AK303299 BC021238	100707	+	AB209111|NLE1|54475|notchless homolog 1 (Drosophila)##BC002884|NLE1|54475|notchless homolog 1 (Drosophila)##BC012075|NLE1|54475|notchless homolog 1 (Drosophila)##AK303253|NLE1|54475|notchless homolog 1 (Drosophila)##AK001320|NLE1|54475|notchless homolog 1 (Drosophila)##AK304508|NLE1|54475|notchless homolog 1 (Drosophila)##NM_001014445|NLE1|54475|notchless homolog 1 (Drosophila)##NM_018096|NLE1|54475|notchless homolog 1 (Drosophila)##AK313775|FNDC8|54752|fibronectin type III domain containing 8##NM_017559|FNDC8|54752|fibronectin type III domain containing 8##BC024002|FNDC8|54752|fibronectin type III domain containing 8##AK225743|FNDC8|54752|fibronectin type III domain containing 8##AL133054|FNDC8|54752|fibronectin type III domain containing 8##EU831600|FNDC8|54752|fibronectin type III domain containing 8##EU831687|FNDC8|54752|fibronectin type III domain containing 8##NM_001142571|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_002878|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_133629|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK095929|UNC45B|146862|unc-45 homolog B (C. elegans)##BX647642|UNC45B|146862|unc-45 homolog B (C. elegans)##NM_001033576|UNC45B|146862|unc-45 homolog B (C. elegans)##NM_173167|UNC45B|146862|unc-45 homolog B (C. elegans)##AL832355|UNC45B|146862|unc-45 homolog B (C. elegans)##AL833281|UNC45B|146862|unc-45 homolog B (C. elegans)##AK097473|SLC35G3|146861|solute carrier family 35, member G3##BC136422|SLC35G3|146861|solute carrier family 35, member G3##BC140700|SLC35G3|146861|solute carrier family 35, member G3##NM_152462|SLC35G3|146861|solute carrier family 35, member G3##NM_144975|SLFN5|162394|schlafen family member 5##AK303632|SLFN5|162394|schlafen family member 5##BX647942|SLFN5|162394|schlafen family member 5##AK054668|SLFN5|162394|schlafen family member 5##AK303299|SLFN5|162394|schlafen family member 5##BC021238|SLFN5|162394|schlafen family member 5	0.919375	CTCF.p2:-1:0.865
chr17	5972336	5972479	reg1015402.p2	8.795	+	AF298548 TSC_hg19_v1_chr17_-_5487785 AF310105 AB023143 BC028066 BC051787 AK310936 NM_001033053 NM_014922 NM_033004 NM_033006 NM_033007	-484608	-	AF217966 AF131825 NM_001162371 TSC_hg19_v1_chr17_-_5404327	-568091	-	AK289939 AL136906 NM_024039	-582178	+	AK309645 TSC_hg19_v1_chr17_+_5972435 AK289603	23	+	TSC_hg19_v1_chr17_+_5973700 AL833730 NM_015253	1400	+	TSC_hg19_v1_chr17_+_5974408 BC009975	2010	+	AF298548|NLRP1|22861|NLR family, pyrin domain containing 1##AF310105|NLRP1|22861|NLR family, pyrin domain containing 1##AB023143|NLRP1|22861|NLR family, pyrin domain containing 1##AK310936|NLRP1|22861|NLR family, pyrin domain containing 1##NM_001033053|NLRP1|22861|NLR family, pyrin domain containing 1##NM_014922|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033004|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033006|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033007|NLRP1|22861|NLR family, pyrin domain containing 1##AF217966|LOC728392|728392|uncharacterized LOC728392##AF131825|LOC728392|728392|uncharacterized LOC728392##NM_001162371|LOC728392|728392|uncharacterized LOC728392##AK289939|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AL136906|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##NM_024039|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AK309645|WSCD1|23302|WSC domain containing 1##AK289603|WSCD1|23302|WSC domain containing 1##AL833730|WSCD1|23302|WSC domain containing 1##NM_015253|WSCD1|23302|WSC domain containing 1##BC009975|WSCD1|23302|WSC domain containing 1	0.0	
chr2	182331502	182331626	reg1016037.p1	8.795	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	-9242	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	-9514	+	NM_000885	-9946	+	AJ697855 AJ697856 AY357073 AY690329 AY690330 AY690331 AY690332 AY690333 AJ640141 AJ697858 BC137498 BC137499 AK293844 NM_001030311 NM_001030312 NM_001030313 NM_001160277 NM_201548 TSC_hg19_v1_chr2_-_182521833 HQ426666 HQ426667 HQ426668 HQ426669 HQ426670	190227	-	BC009046 TSC_hg19_v1_chr2_-_182545243 AB593068 AB593070 AB593071 AK313799 AB593069 D82347 HQ426678 JF290420 NM_002500	213737	-	TSC_hg19_v1_chr2_+_182756494 NM_001130445 NM_006751 AK093143 AX747951 AB067514	424967	+	X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ697855|CERKL|375298|ceramide kinase-like##AJ697856|CERKL|375298|ceramide kinase-like##AY357073|CERKL|375298|ceramide kinase-like##AY690329|CERKL|375298|ceramide kinase-like##AY690330|CERKL|375298|ceramide kinase-like##AY690331|CERKL|375298|ceramide kinase-like##AY690332|CERKL|375298|ceramide kinase-like##AY690333|CERKL|375298|ceramide kinase-like##AJ640141|CERKL|375298|ceramide kinase-like##AJ697858|CERKL|375298|ceramide kinase-like##BC137498|CERKL|375298|ceramide kinase-like##BC137499|CERKL|375298|ceramide kinase-like##AK293844|CERKL|375298|ceramide kinase-like##NM_001030311|CERKL|375298|ceramide kinase-like##NM_001030312|CERKL|375298|ceramide kinase-like##NM_001030313|CERKL|375298|ceramide kinase-like##NM_001160277|CERKL|375298|ceramide kinase-like##NM_201548|CERKL|375298|ceramide kinase-like##HQ426667|CERKL|375298|ceramide kinase-like##BC009046|NEUROD1|4760|neurogenic differentiation 1##AB593068|NEUROD1|4760|neurogenic differentiation 1##AB593070|NEUROD1|4760|neurogenic differentiation 1##AB593071|NEUROD1|4760|neurogenic differentiation 1##AK313799|NEUROD1|4760|neurogenic differentiation 1##AB593069|NEUROD1|4760|neurogenic differentiation 1##D82347|NEUROD1|4760|neurogenic differentiation 1##HQ426678|CERKL|375298|ceramide kinase-like##JF290420|CERKL|375298|ceramide kinase-like##NM_002500|NEUROD1|4760|neurogenic differentiation 1##NM_001130445|SSFA2|6744|sperm specific antigen 2##NM_006751|SSFA2|6744|sperm specific antigen 2##AB067514|SSFA2|6744|sperm specific antigen 2	0.998484	CTCF.p2:-5:0.998
chr2	204647150	204647265	reg1016110.p1	8.795	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	-75808	+	NM_001243077 NM_001243078 NM_006139 AJ517504 AK313313 J02988 TSC_hg19_v1_chr2_+_204571361 AK303421	-75927	+	TSC_hg19_v1_chr2_-_204399987 BC032486 AK096270 AB053311 AJ584699 AY494951 AY523977 AY523978 NM_203365 NM_213589	-247061	-	BC070162 AF414120 NM_001037631 NM_005214 AK313732 BC069566 BC074893 BC074842 AB590653 AF486806 AY209009 AY792514 AY999702 DQ785106 L15006	85380	+	AK314985 AJ277832 NM_012092 BC028006 BC028210 AB023135 AF218312 CU688368 CU688430	154287	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	763283	+	BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule##NM_001243077|CD28|940|CD28 molecule##NM_001243078|CD28|940|CD28 molecule##NM_006139|CD28|940|CD28 molecule##AJ517504|CD28|940|CD28 molecule##AK313313|CD28|940|CD28 molecule##J02988|CD28|940|CD28 molecule##AK303421|CD28|940|CD28 molecule##AK096270|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AB053311|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AJ584699|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY494951|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523977|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523978|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_203365|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_213589|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK314985|ICOS|29851|inducible T-cell co-stimulator##AJ277832|ICOS|29851|inducible T-cell co-stimulator##NM_012092|ICOS|29851|inducible T-cell co-stimulator##BC028006|ICOS|29851|inducible T-cell co-stimulator##BC028210|ICOS|29851|inducible T-cell co-stimulator##AB023135|ICOS|29851|inducible T-cell co-stimulator##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)	0.077162	
chr7	11467449	11467568	reg1015576.p1	8.795	+	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	-453998	+	AK130950 TSC_hg19_v1_chr7_-_10979760 AK024837 U94586 BC105295 NM_002489	-487724	-	CR407618 CR541716 TSC_hg19_v1_chr7_-_10979730 AF201077 BC101794 BC101796	-487799	-	TSC_hg19_v1_chr7_-_11871825 AK092252 AX747433 NM_015204	404281	-	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	783417	+	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	976024	-	AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14##AK130950|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK024837|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##U94586|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC105295|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_002489|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR407618|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR541716|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AF201077|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101794|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101796|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains	0.99922	CTCF.p2:-19:0.999
chr12	99137276	99137398	reg1015736.p1	8.794	+	AK307509 TSC_hg19_v1_chr12_+_99039067 AF013263 NM_001160 NM_013229 NM_181861 NM_181868 NM_181869	-98340	+	TSC_hg19_v1_chr12_-_99038755 AK123069	-98532	-	TSC_hg19_v1_chr12_-_99038567 CU691338 BC058933 AK055613 BC107572 BC051372 AJ539425 AJ539426 AJ539427 BC029415 NM_153687 NM_201612 NM_201613	-98829	-	AY356353 AK315954 AM980945 AK294994 TSC_hg19_v1_chr12_-_99288638 AK295988 NM_001204065 NM_001204079 NM_001204080 NM_001204081	151250	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	411220	-	AK294191 NM_001204067	411530	-	AK307509|APAF1|317|apoptotic peptidase activating factor 1##AF013263|APAF1|317|apoptotic peptidase activating factor 1##NM_001160|APAF1|317|apoptotic peptidase activating factor 1##NM_013229|APAF1|317|apoptotic peptidase activating factor 1##NM_181861|APAF1|317|apoptotic peptidase activating factor 1##NM_181868|APAF1|317|apoptotic peptidase activating factor 1##NM_181869|APAF1|317|apoptotic peptidase activating factor 1##AK123069|IKBIP|121457|IKBKB interacting protein##BC058933|IKBIP|121457|IKBKB interacting protein##AK055613|IKBIP|121457|IKBKB interacting protein##BC107572|IKBIP|121457|IKBKB interacting protein##BC051372|IKBIP|121457|IKBKB interacting protein##AJ539425|IKBIP|121457|IKBKB interacting protein##AJ539426|IKBIP|121457|IKBKB interacting protein##AJ539427|IKBIP|121457|IKBKB interacting protein##BC029415|IKBIP|121457|IKBKB interacting protein##NM_153687|IKBIP|121457|IKBKB interacting protein##NM_201612|IKBIP|121457|IKBKB interacting protein##NM_201613|IKBIP|121457|IKBKB interacting protein##AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	0.826135	CTCF.p2:-10:0.826
chr3	30154534	30154634	reg1013542.p1	8.794	+	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	-831620	+	NM_001040432	-1722598	+	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	-1764023	-	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	493438	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	493819	+	AL832766 NM_207359	781568	-	NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1	0.947428	CTCF.p2:-4:0.947
chr1	238027702	238027811	reg1013462.p1	8.793	+	NM_001035 X98330 Y08218	-821983	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-1068921	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	-1069179	+	AK314151 NM_021186	26465	-	TSC_hg19_v1_chr1_+_239550016 AK056349	1522186	+	AF279779 NM_000740	1764616	+	NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3	0.487109	CTCF.p2:-13:0.487
chr16	87331654	87331763	reg1011272.p1	8.793	+	BC100027 NM_005250	-719594	+	BC113437 BC113439 NM_005251	-730852	+	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	-742936	-	TSC_hg19_v1_chr16_-_87350760 AB528835 AM392822 AM393070	19092	-	TSC_hg19_v1_chr16_-_87350999 BC015536 AK026130 NM_001195124 NM_001195125	19278	-	TSC_hg19_v1_chr16_-_87417364 AY736035 AF428140 BC012748 BC002985 NM_024735	85654	-	BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AM392822|C16orf95|100506581|chromosome 16 open reading frame 95##AM393070|C16orf95|100506581|chromosome 16 open reading frame 95##BC015536|C16orf95|100506581|chromosome 16 open reading frame 95##AK026130|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195124|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195125|C16orf95|100506581|chromosome 16 open reading frame 95##AY736035|FBXO31|79791|F-box protein 31##AF428140|FBXO31|79791|F-box protein 31##BC012748|FBXO31|79791|F-box protein 31##BC002985|FBXO31|79791|F-box protein 31##NM_024735|FBXO31|79791|F-box protein 31	0.996911	CTCF.p2:5:0.997
chr4	177972742	177972889	reg1017893.p1	8.793	+	AK313879 BC035212 U58111 X94216 U43142 BC063685 NM_005429 TSC_hg19_v1_chr4_-_177713956	-259005	-	TSC_hg19_v1_chr4_-_177241652 AK096223	-731184	-	TSC_hg19_v1_chr4_+_177241122 AK026302 AL136660 AY359044 BC043490 BC053883 BC047290 CU690386 EU831652 EU831735	-731647	+	TSC_hg19_v1_chr4_+_178231006 NM_018248	258178	+	TSC_hg19_v1_chr4_+_178231027 AK001720 BC025954 AK307692 AB079071	258245	+	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	390726	-	AK313879|VEGFC|7424|vascular endothelial growth factor C##BC035212|VEGFC|7424|vascular endothelial growth factor C##U58111|VEGFC|7424|vascular endothelial growth factor C##X94216|VEGFC|7424|vascular endothelial growth factor C##U43142|VEGFC|7424|vascular endothelial growth factor C##BC063685|VEGFC|7424|vascular endothelial growth factor C##NM_005429|VEGFC|7424|vascular endothelial growth factor C##AK026302|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AL136660|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AY359044|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC043490|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC053883|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC047290|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831652|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831735|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##NM_018248|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK001720|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##BC025954|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK307692|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AB079071|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase	0.974063	CTCF.p2:-15:0.974
chr11	117097263	117097384	reg1015114.p1	8.792	+	BX640723 TSC_hg19_v1_chr11_+_117075706	-21629	+	NM_001001522 NM_003186 AK223002 M95787 TSC_hg19_v1_chr11_+_117070088 AK314043 BC010946 BC093050 BC004927 D17409	-27244	+	TSC_hg19_v1_chr11_+_117049977 AK303023	-47344	+	TSC_hg19_v1_chr11_-_117100552 BT006870 DQ890632 DQ893803	3232	-	BC006357 U33849 TSC_hg19_v1_chr11_-_117102782 AK222907	5456	-	BC010696 NM_004716 TSC_hg19_v1_chr11_-_117102811 AK312429	5498	-	BX640723|TAGLN|6876|transgelin##NM_001001522|TAGLN|6876|transgelin##NM_003186|TAGLN|6876|transgelin##AK223002|TAGLN|6876|transgelin##M95787|TAGLN|6876|transgelin##AK314043|TAGLN|6876|transgelin##BC010946|TAGLN|6876|transgelin##BC093050|TAGLN|6876|transgelin##BC004927|TAGLN|6876|transgelin##D17409|TAGLN|6876|transgelin##AK303023|SIDT2|51092|SID1 transmembrane family, member 2##BT006870|PCSK7|9159|proprotein convertase subtilisin/kexin type 7##DQ890632|PCSK7|9159|proprotein convertase subtilisin/kexin type 7##DQ893803|PCSK7|9159|proprotein convertase subtilisin/kexin type 7##BC006357|PCSK7|9159|proprotein convertase subtilisin/kexin type 7##U33849|PCSK7|9159|proprotein convertase subtilisin/kexin type 7##AK222907|PCSK7|9159|proprotein convertase subtilisin/kexin type 7##BC010696|PCSK7|9159|proprotein convertase subtilisin/kexin type 7##NM_004716|PCSK7|9159|proprotein convertase subtilisin/kexin type 7##AK312429|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	0.99808	CTCF.p2:17:0.998
chr12	97380855	97380954	reg1012120.p1	8.792	+	BC027605 NM_001135175	-79661	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-79873	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-586587	-	TSC_hg19_v1_chr12_-_98897622 AK126817	1516723	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	1528463	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	1528503	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.982843	CTCF.p2:12:0.983
chr1	62596877	62597028	reg1016059.p1	8.792	+	TSC_hg19_v1_chr1_+_62208151 AJ001306 AJ224747 AJ224748 NM_176877 AK307713 AK308428 BC142661 BC142723	-388802	+	AF353990 NM_032027	-405858	-	TSC_hg19_v1_chr1_-_62190806 BC048995 BC029486	-406133	-	NM_001164835 NM_019079 BC012555 BC060808 AB211065 AL834314 AK001973 BC111559	63564	+	AK091941 AX747268 TSC_hg19_v1_chr1_-_62785028	188047	-	TSC_hg19_v1_chr1_-_62785084 AB284127 BC060866 NM_181712	188127	-	AJ001306|INADL|10207|InaD-like (Drosophila)##AJ224747|INADL|10207|InaD-like (Drosophila)##AJ224748|INADL|10207|InaD-like (Drosophila)##NM_176877|INADL|10207|InaD-like (Drosophila)##AK307713|INADL|10207|InaD-like (Drosophila)##AK308428|INADL|10207|InaD-like (Drosophila)##BC142661|INADL|10207|InaD-like (Drosophila)##BC142723|INADL|10207|InaD-like (Drosophila)##AF353990|TM2D1|83941|TM2 domain containing 1##NM_032027|TM2D1|83941|TM2 domain containing 1##BC048995|TM2D1|83941|TM2 domain containing 1##BC029486|TM2D1|83941|TM2 domain containing 1##NM_001164835|L1TD1|54596|LINE-1 type transposase domain containing 1##NM_019079|L1TD1|54596|LINE-1 type transposase domain containing 1##BC012555|L1TD1|54596|LINE-1 type transposase domain containing 1##BC060808|L1TD1|54596|LINE-1 type transposase domain containing 1##AB211065|L1TD1|54596|LINE-1 type transposase domain containing 1##AL834314|L1TD1|54596|LINE-1 type transposase domain containing 1##AK001973|L1TD1|54596|LINE-1 type transposase domain containing 1##BC111559|L1TD1|54596|LINE-1 type transposase domain containing 1##AK091941|KANK4|163782|KN motif and ankyrin repeat domains 4##AB284127|KANK4|163782|KN motif and ankyrin repeat domains 4##BC060866|KANK4|163782|KN motif and ankyrin repeat domains 4##NM_181712|KANK4|163782|KN motif and ankyrin repeat domains 4	0.908734	CTCF.p2:19:0.909
chr4	88600720	88600851	reg1014977.p1	8.792	+	NM_001079911 NM_004407 U65378 U89012	-29330	+	NM_014208	-71105	+	TSC_hg19_v1_chr4_-_88450604 NM_001128310 NM_004684	-150158	-	NM_004967 TSC_hg19_v1_chr4_+_88720705 J05213	119936	+	AK075076 NM_001184694	141770	+	AK307774 NM_001184695 NM_001184696 NM_001184697 NM_020203 AJ276396 BC128158 AF325916	153344	+	NM_001079911|DMP1|1758|dentin matrix acidic phosphoprotein 1##NM_004407|DMP1|1758|dentin matrix acidic phosphoprotein 1##U65378|DMP1|1758|dentin matrix acidic phosphoprotein 1##U89012|DMP1|1758|dentin matrix acidic phosphoprotein 1##NM_014208|DSPP|1834|dentin sialophosphoprotein##NM_001128310|SPARCL1|8404|SPARC-like 1 (hevin)##NM_004684|SPARCL1|8404|SPARC-like 1 (hevin)##NM_004967|IBSP|3381|integrin-binding sialoprotein##J05213|IBSP|3381|integrin-binding sialoprotein##AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein##AK307774|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184695|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184696|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184697|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_020203|MEPE|56955|matrix extracellular phosphoglycoprotein##AJ276396|MEPE|56955|matrix extracellular phosphoglycoprotein##BC128158|MEPE|56955|matrix extracellular phosphoglycoprotein##AF325916|MEPE|56955|matrix extracellular phosphoglycoprotein	0.982183	CTCF.p2:-7:0.982
chr6	109704518	109704657	reg1016642.p1	8.792	+	TSC_hg19_v1_chr6_-_109703704 NM_001142401 NM_001142402 NM_001142403 NM_001142404 NM_006016	-842	-	TSC_hg19_v1_chr6_-_109703671 AK307193 AK312357 AK301692	-915	-	TSC_hg19_v1_chr6_-_109703643 BC011522 AF299342 AF299343 D14043	-949	-	TSC_hg19_v1_chr6_-_109761830 AK293674 BC038716 AK315790 BC026359 BC026360	57350	-	TSC_hg19_v1_chr6_+_109761901 AK310148 AK313515 NM_003080 AJ222801	57356	+	TSC_hg19_v1_chr6_+_109762043 BC000038	57463	+	NM_001142401|CD164|8763|CD164 molecule, sialomucin##NM_001142402|CD164|8763|CD164 molecule, sialomucin##NM_001142403|CD164|8763|CD164 molecule, sialomucin##NM_001142404|CD164|8763|CD164 molecule, sialomucin##NM_006016|CD164|8763|CD164 molecule, sialomucin##AK312357|CD164|8763|CD164 molecule, sialomucin##AK301692|CD164|8763|CD164 molecule, sialomucin##BC011522|CD164|8763|CD164 molecule, sialomucin##AF299342|CD164|8763|CD164 molecule, sialomucin##AF299343|CD164|8763|CD164 molecule, sialomucin##D14043|CD164|8763|CD164 molecule, sialomucin##AK293674|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##BC038716|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##AK315790|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##BC026359|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##BC026360|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##AK310148|SMPD2|6610|sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)##AK313515|SMPD2|6610|sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)##NM_003080|SMPD2|6610|sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)##AJ222801|SMPD2|6610|sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)##BC000038|SMPD2|6610|sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)	0.824103	CTCF.p2:14:0.824
chr8	23104328	23104462	reg1013581.p2	8.792	+	TSC_hg19_v1_chr8_+_23104153 AK092500 AX747573 AL833843 BC019110 AK296592 CU676386 BC004344	-153	+	TSC_hg19_v1_chr8_+_23104147 AK315664 AK021776	-260	+	AK097202 NM_152272 BC042050	-3237	+	TSC_hg19_v1_chr8_+_23145620 NM_001136108 AK293465	41202	+	TSC_hg19_v1_chr8_+_23145630 AL050297 BC032421	41283	+	AK098436 TSC_hg19_v1_chr8_-_23177535	73113	-	AK092500|CHMP7|91782|charged multivesicular body protein 7##AL833843|CHMP7|91782|charged multivesicular body protein 7##BC019110|CHMP7|91782|charged multivesicular body protein 7##AK296592|CHMP7|91782|charged multivesicular body protein 7##BC004344|CHMP7|91782|charged multivesicular body protein 7##AK315664|CHMP7|91782|charged multivesicular body protein 7##AK021776|CHMP7|91782|charged multivesicular body protein 7##AK097202|CHMP7|91782|charged multivesicular body protein 7##NM_152272|CHMP7|91782|charged multivesicular body protein 7##BC042050|CHMP7|91782|charged multivesicular body protein 7##NM_001136108|R3HCC1|203069|R3H domain and coiled-coil containing 1##AK293465|R3HCC1|203069|R3H domain and coiled-coil containing 1##AL050297|R3HCC1|203069|R3H domain and coiled-coil containing 1##BC032421|R3HCC1|203069|R3H domain and coiled-coil containing 1##AK098436|LOXL2|4017|lysyl oxidase-like 2	0.950724	CTCF.p2:14:0.951
chr10	60541774	60541926	reg1016613.p1	8.791	+	TSC_hg19_v1_chr10_+_60272869 NM_001080512 AY726586	-268938	+	BC029815 TSC_hg19_v1_chr10_+_60145169 AK312558 M62810 NM_003201 BC018628 BC104482 BC126366 EU279428 HQ258758 AB451241 AB451366 AB464302 BT019658 BT019659 CR407653	-396645	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	-447014	+	TSC_hg19_v1_chr10_-_60936189 AK055418	394356	-	AL834339 NM_032439 TSC_hg19_v1_chr10_+_60936408 CR749429	394538	+	BC011268 AK054956 TSC_hg19_v1_chr10_+_60936573 AB384640 AM392743	394710	+	NM_001080512|BICC1|80114|bicaudal C homolog 1 (Drosophila)##AY726586|BICC1|80114|bicaudal C homolog 1 (Drosophila)##BC029815|TFAM|7019|transcription factor A, mitochondrial##AK312558|TFAM|7019|transcription factor A, mitochondrial##M62810|TFAM|7019|transcription factor A, mitochondrial##NM_003201|TFAM|7019|transcription factor A, mitochondrial##BC018628|TFAM|7019|transcription factor A, mitochondrial##BC104482|TFAM|7019|transcription factor A, mitochondrial##BC126366|TFAM|7019|transcription factor A, mitochondrial##EU279428|TFAM|7019|transcription factor A, mitochondrial##HQ258758|TFAM|7019|transcription factor A, mitochondrial##AB451241|TFAM|7019|transcription factor A, mitochondrial##AB451366|TFAM|7019|transcription factor A, mitochondrial##BT019658|TFAM|7019|transcription factor A, mitochondrial##BT019659|TFAM|7019|transcription factor A, mitochondrial##CR407653|TFAM|7019|transcription factor A, mitochondrial##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	0.924736	CTCF.p2:-14:0.925
chr1	144621490	144621653	reg1017145.p1	8.791	+	AY894562 AY894567 AY894568 AY894572 AY894574 NM_001037675	-6613	+	TSC_hg19_v1_chr1_+_144593695 BX538005 AK308678	-27873	+	TSC_hg19_v1_chr1_-_144521169 AK090660 AX746564	-100342	-	CU687328 TSC_hg19_v1_chr1_-_144931874 BC078660	310240	-	BC132717 TSC_hg19_v1_chr1_-_144932057 BC004860 NM_001002811	310476	-	AL832024 AB042556 AL831815 TSC_hg19_v1_chr1_-_144994880	373290	-	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894567|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894568|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894572|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894574|NBPF9|400818|neuroblastoma breakpoint family, member 9##NM_001037675|NBPF9|400818|neuroblastoma breakpoint family, member 9##BX538005|NBPF10|100132406|neuroblastoma breakpoint family, member 10##AK090660|FAM91A2|57234|family with sequence similarity 91, member A2##BC078660|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC132717|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC004860|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001002811|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AL832024|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AL831815|PDE4DIP|9659|phosphodiesterase 4D interacting protein	0.701931	CTCF.p2:-10:0.702
chr1	157044161	157044264	reg1014106.p2	8.791	+	BC057394 NM_014784 NM_198236	-29051	-	AK292342 NM_144702 BC033790	-153780	+	NM_001080471	-180690	+	AK131392 NM_001004341	25387	-	TSC_hg19_v1_chr1_-_157108158 L16464	63938	-	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	64071	-	BC057394|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_014784|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_198236|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##AK292342|LRRC71|149499|leucine rich repeat containing 71##NM_144702|LRRC71|149499|leucine rich repeat containing 71##BC033790|LRRC71|149499|leucine rich repeat containing 71##NM_001080471|PEAR1|375033|platelet endothelial aggregation receptor 1##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##L16464|ETV3|2117|ets variant 3##BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3	0.807659	CTCF.p2:2:0.808
chr15	30367623	30367726	reg1015282.p2	8.790	+	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-253051	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-253332	-	NM_015307	-504748	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	318038	-	TSC_hg19_v1_chr15_+_30918372 BC071990	550712	+	BC105788 NM_001039841	551204	+	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B	0.993289	CTCF.p2:5:0.993
chr6	42182627	42182760	reg1015315.p1	8.790	+	BX537393 NM_002098	-20000	-	AK313865 NM_000409 BC031663 AK125780	-59530	+	NM_001164446	-71979	-	CU680358 AK298219 TSC_hg19_v1_chr6_-_42185591 AF113220 AF277180 AK098446	2897	-	TSC_hg19_v1_chr6_-_42185597 AK316599 BC012560	2904	-	TSC_hg19_v1_chr6_-_42185600 AK001429	2907	-	BX537393|GUCA1B|2979|guanylate cyclase activator 1B (retina)##NM_002098|GUCA1B|2979|guanylate cyclase activator 1B (retina)##AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)##NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)##BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)##AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)##NM_001164446|C6orf132|647024|chromosome 6 open reading frame 132##AK298219|MRPS10|55173|mitochondrial ribosomal protein S10##AF113220|MRPS10|55173|mitochondrial ribosomal protein S10##AF277180|MRPS10|55173|mitochondrial ribosomal protein S10##AK098446|MRPS10|55173|mitochondrial ribosomal protein S10##AK316599|MRPS10|55173|mitochondrial ribosomal protein S10##BC012560|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10	0.976596	CTCF.p2:-1:0.977
chr8	118874426	118874533	reg1014747.p1	8.790	+	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	-341437	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	-341521	+	NM_001172814 NM_173851	-727143	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	249482	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	759646	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	759728	-	BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##NM_080651|MED30|90390|mediator complex subunit 30##NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12	0.342193	CTCF.p2:-2:0.342
chr7	43850256	43850405	reg1016669.p1	8.789	+	TSC_hg19_v1_chr7_+_43798283 AK291862 X93086 U34877	-52014	+	TSC_hg19_v1_chr7_+_43798278 NM_000712 NM_001253823 BC005902 BC008456	-52063	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	-81236	-	AF161453 CU680250 BC012167 TSC_hg19_v1_chr7_-_43909107 AK054982 BC054865 NM_032014	58786	-	AB040940 TSC_hg19_v1_chr7_-_43946044	95647	-	TSC_hg19_v1_chr7_-_43946196 AB384612 AY078404 BC018426 BX640797 BX648505 AK314339	95857	-	AK291862|BLVRA|644|biliverdin reductase A##X93086|BLVRA|644|biliverdin reductase A##U34877|BLVRA|644|biliverdin reductase A##NM_000712|BLVRA|644|biliverdin reductase A##NM_001253823|BLVRA|644|biliverdin reductase A##BC005902|BLVRA|644|biliverdin reductase A##BC008456|BLVRA|644|biliverdin reductase A##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44##AF161453|MRPS24|64951|mitochondrial ribosomal protein S24##BC012167|MRPS24|64951|mitochondrial ribosomal protein S24##BC054865|MRPS24|64951|mitochondrial ribosomal protein S24##NM_032014|MRPS24|64951|mitochondrial ribosomal protein S24##AB040940|URGCP|55665|upregulator of cell proliferation##AY078404|URGCP|55665|upregulator of cell proliferation##BC018426|URGCP|55665|upregulator of cell proliferation##BX640797|URGCP|55665|upregulator of cell proliferation##BX648505|URGCP|55665|upregulator of cell proliferation##AK314339|URGCP|55665|upregulator of cell proliferation	0.993768	CTCF.p2:9:0.994
chr11	128027911	128028042	reg1005500.p2	8.788	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1154671	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1157251	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1157316	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	363987	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	364158	-	BX640634 NM_001143820	429476	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.287685	CTCF.p2:10:0.288
chr1	210484581	210484702	reg1015206.p1	8.788	+	BC012083 NM_019605 AK096381	-78430	+	AJ617623 TSC_hg19_v1_chr1_+_210111595 AK091517 AX747035 BC130323 BC144154 BC144155 BC144157 AJ617625	-373052	+	NM_001146261 NM_001146262 NM_001146264 NM_153262 TSC_hg19_v1_chr1_+_210111559	-373091	+	NM_001122834 NM_001170564 AK297193	16955	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	17624	+	NM_001170580 BC051191	18000	+	BC012083|SERTAD4|56256|SERTA domain containing 4##NM_019605|SERTAD4|56256|SERTA domain containing 4##AK096381|SERTAD4|56256|SERTA domain containing 4##AJ617623|SYT14|255928|synaptotagmin XIV##AK091517|SYT14|255928|synaptotagmin XIV##BC130323|SYT14|255928|synaptotagmin XIV##BC144154|SYT14|255928|synaptotagmin XIV##BC144155|SYT14|255928|synaptotagmin XIV##BC144157|SYT14|255928|synaptotagmin XIV##AJ617625|SYT14|255928|synaptotagmin XIV##NM_001146261|SYT14|255928|synaptotagmin XIV##NM_001146262|SYT14|255928|synaptotagmin XIV##NM_001146264|SYT14|255928|synaptotagmin XIV##NM_153262|SYT14|255928|synaptotagmin XIV##NM_001122834|HHAT|55733|hedgehog acyltransferase##NM_001170564|HHAT|55733|hedgehog acyltransferase##AK297193|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase##NM_001170580|HHAT|55733|hedgehog acyltransferase##BC051191|HHAT|55733|hedgehog acyltransferase	0.877024	CTCF.p2:-14:0.877
chr12	25540545	25540624	reg1011452.p1	8.788	+	TSC_hg19_v1_chr12_-_25403864 AK292510 NM_004985 NM_033360 BC029545 M54968	-136643	-	TSC_hg19_v1_chr12_-_25403822 BC013572	-136769	-	AK094491 TSC_hg19_v1_chr12_+_25348215 BC100276 BC071769	-192378	+	AK093323 AX748055 NM_152590 BC037957 AK310411 AK302292 NM_001145728 NM_001145729	165612	-	AK296816 NM_001145727	260903	-	TSC_hg19_v1_chr12_+_26111964 NM_001164748 NM_007211 BC030021 AB093206 AY665468 AY665469 AY665470 AY665471	571417	+	AK292510|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##NM_004985|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##NM_033360|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC029545|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##M54968|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC013572|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC100276|LYRM5|144363|LYR motif containing 5##BC071769|LYRM5|144363|LYR motif containing 5##AK093323|IFLTD1|160492|intermediate filament tail domain containing 1##NM_152590|IFLTD1|160492|intermediate filament tail domain containing 1##BC037957|IFLTD1|160492|intermediate filament tail domain containing 1##AK310411|IFLTD1|160492|intermediate filament tail domain containing 1##AK302292|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145728|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145729|IFLTD1|160492|intermediate filament tail domain containing 1##AK296816|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145727|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001164748|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_007211|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##BC030021|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AB093206|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665468|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665469|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665470|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665471|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	0.94483	CTCF.p2:-8:0.945
chr7	127269443	127269536	reg1014344.p2	8.788	+	AB528989 EU446646 BC074761 BC107149 BC107150 AF043978 NM_006193	-13813	-	AF281049 NM_020369 AK225867 AK300518 AK301765 AK314050 BC035606 DQ892069 DQ895262 CU690130	-35692	+	NM_001662 TSC_hg19_v1_chr7_+_127228469 AK307297 AK308548 BC033104 M57567 AK297026 AK312107 BC003043 AB528679 AF493884 BT007087	-41011	+	TSC_hg19_v1_chr7_+_127292198 NM_014390	22693	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	22747	+	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	22847	+	EU446646|PAX4|5078|paired box 4##BC074761|PAX4|5078|paired box 4##BC107149|PAX4|5078|paired box 4##BC107150|PAX4|5078|paired box 4##AF043978|PAX4|5078|paired box 4##NM_006193|PAX4|5078|paired box 4##AF281049|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##NM_020369|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##AK225867|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##AK300518|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##AK314050|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##BC035606|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##DQ892069|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##DQ895262|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##NM_001662|ARF5|381|ADP-ribosylation factor 5##AK307297|ARF5|381|ADP-ribosylation factor 5##AK308548|ARF5|381|ADP-ribosylation factor 5##BC033104|ARF5|381|ADP-ribosylation factor 5##M57567|ARF5|381|ADP-ribosylation factor 5##AK297026|ARF5|381|ADP-ribosylation factor 5##AK312107|ARF5|381|ADP-ribosylation factor 5##BC003043|ARF5|381|ADP-ribosylation factor 5##AF493884|ARF5|381|ADP-ribosylation factor 5##BT007087|ARF5|381|ADP-ribosylation factor 5##NM_014390|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1	0.059036	
chr4	117521127	117521278	reg1026134.p1	8.787	+	BC113075 BC012326 AK289670 AB036429 NM_022569	-1486221	-	NM_003360 U30930	-1977680	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-2001619	+	AK074617 BC030831 NM_152402	485531	-	TSC_hg19_v1_chr4_+_118954764 AY358852	1433569	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	1434373	+	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	1.406788	CTCF.p2:15:1.000	CTCF.p2:99:0.407
chr7	102120523	102120649	reg1015731.p1	8.787	+	DQ893151 DQ896446 TSC_hg19_v1_chr7_-_102119367 X98433 BC040116 BC024165 BC141830 BC139902 BC065711 L37127 X82385 AK290515 NM_006234	-1243	-	TSC_hg19_v1_chr7_+_102105459 AB209379 CU688900	-15094	+	TSC_hg19_v1_chr7_+_102105430 AL133057 BC030547 NM_152892 AK290967 AK313771	-15178	+	AK302217 NM_001031618 NM_001166339	71092	+	AJ277739 AJ277740 AJ277741 AB384935 BC056864 BC071870 TSC_hg19_v1_chr7_-_102212997 BC044209 BC050598	92401	-	AF468111 BC110985 TSC_hg19_v1_chr7_-_102213031 AB209398 BC141857 AK309487 NM_001097615	92454	-	DQ893151|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##DQ896446|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X98433|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC040116|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC024165|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC141830|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC139902|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC065711|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##L37127|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X82385|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AK290515|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##NM_006234|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AB209379|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AL133057|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##BC030547|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##NM_152892|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK290967|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK313771|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##AJ277739|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AJ277740|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277741|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AF468111|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AB209398|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_001097615|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3	0.830069	CTCF.p2:-1:0.830
chr1	223263547	223263662	reg1015918.p1	8.786	+	TSC_hg19_v1_chr1_+_222988422 NM_032890	-275213	+	AK125494 NM_207468	-353047	+	TSC_hg19_v1_chr1_+_222886732 AK315930 AK293974	-376871	+	TSC_hg19_v1_chr1_-_223316591 NM_003268	53002	-	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	273867	-	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	303161	+	NM_032890|DISP1|84976|dispatched homolog 1 (Drosophila)##AK125494|FAM177B|400823|family with sequence similarity 177, member B##NM_207468|FAM177B|400823|family with sequence similarity 177, member B##AK315930|BROX|148362|BRO1 domain and CAAX motif containing##AK293974|BROX|148362|BRO1 domain and CAAX motif containing##NM_003268|TLR5|7100|toll-like receptor 5##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4##NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65	0.778315	CTCF.p2:-5:0.778
chr2	10972571	10972699	reg1014716.p2	8.786	+	TSC_hg19_v1_chr2_-_10952912 AK294347 D49489 BC001312 NM_005742	-19715	-	TSC_hg19_v1_chr2_-_10952851 DQ891186 DQ894369 AK289428	-19807	-	TSC_hg19_v1_chr2_-_10942759 AK225496 U79278	-29931	-	BC026110 NM_002236 TSC_hg19_v1_chr2_+_11052109	79450	+	AK057872 NM_182500 BC120930 AK292828	300581	+	BC027625 NM_152391 TSC_hg19_v1_chr2_+_11295562	322916	+	AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6##D49489|PDIA6|10130|protein disulfide isomerase family A, member 6##BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6##NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6##AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6##AK225496|PDIA6|10130|protein disulfide isomerase family A, member 6##U79278|PDIA6|10130|protein disulfide isomerase family A, member 6##BC026110|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##NM_002236|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##AK057872|C2orf50|130813|chromosome 2 open reading frame 50##NM_182500|C2orf50|130813|chromosome 2 open reading frame 50##BC120930|C2orf50|130813|chromosome 2 open reading frame 50##AK292828|C2orf50|130813|chromosome 2 open reading frame 50##BC027625|PQLC3|130814|PQ loop repeat containing 3##NM_152391|PQLC3|130814|PQ loop repeat containing 3	1.049269	CTCF.p2:1:0.992
chr1	102033277	102033390	reg1014706.p1	8.785	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-330763	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-330952	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-541900	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	429154	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	429457	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1463450	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.996981	CTCF.p2:-4:0.997
chr13	33243315	33243433	reg1013665.p1	8.785	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-82691	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-82735	+	TSC_hg19_v1_chr13_+_33160610 AL137201	-82756	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	347149	+	AY082590 BC046563 NM_001243466 NM_178007	516841	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	536790	-	BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.909128	CTCF.p2:3:0.909
chr17	6316452	6316585	reg1015449.p2	8.785	+	TSC_hg19_v1_chr17_+_5974408 BC009975	-342101	+	TSC_hg19_v1_chr17_+_5973700 AL833730 NM_015253	-342711	+	AK309645 TSC_hg19_v1_chr17_+_5972435 AK289603	-344088	+	DQ892260 DQ895462 AB593054 BC007994 BC012055 AF038437 AB593047 AB593042 AB593043 AB593050 AB593052 AK314558 AB593051 AK023970 AB593048 BX537907 AB593044 AB593045 AB593046 AB593049 AJ633677 AJ633678 AJ830742 AJ830743 AB593053 AB593055 BX647279 AF525970 NM_001033054 NM_001033055 NM_014336 DQ426860	21985	-	TSC_hg19_v1_chr17_+_6347774 NM_001195228 NM_019013 BC005004 AK225613 AK001353 AK225702 BC013966 AK001018	31245	+	TSC_hg19_v1_chr17_-_6459873 BC035799 BC128583 BC128584 AF334586 NM_001165966 NM_031220	143312	-	BC009975|WSCD1|23302|WSC domain containing 1##AL833730|WSCD1|23302|WSC domain containing 1##NM_015253|WSCD1|23302|WSC domain containing 1##AK309645|WSCD1|23302|WSC domain containing 1##AK289603|WSCD1|23302|WSC domain containing 1##DQ892260|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##DQ895462|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593054|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BC007994|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BC012055|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AF038437|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593047|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593042|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593043|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593050|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593052|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AK314558|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593051|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AK023970|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593048|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BX537907|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593044|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593045|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593046|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593049|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ633677|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ633678|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ830742|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AJ830743|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593053|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AB593055|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##BX647279|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##AF525970|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_001033054|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_001033055|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_014336|AIPL1|23746|aryl hydrocarbon receptor interacting protein-like 1##NM_001195228|FAM64A|54478|family with sequence similarity 64, member A##NM_019013|FAM64A|54478|family with sequence similarity 64, member A##BC005004|FAM64A|54478|family with sequence similarity 64, member A##AK225613|FAM64A|54478|family with sequence similarity 64, member A##AK001353|FAM64A|54478|family with sequence similarity 64, member A##AK225702|FAM64A|54478|family with sequence similarity 64, member A##BC013966|FAM64A|54478|family with sequence similarity 64, member A##AK001018|FAM64A|54478|family with sequence similarity 64, member A##BC035799|PITPNM3|83394|PITPNM family member 3##BC128583|PITPNM3|83394|PITPNM family member 3##BC128584|PITPNM3|83394|PITPNM family member 3##AF334586|PITPNM3|83394|PITPNM family member 3##NM_001165966|PITPNM3|83394|PITPNM family member 3##NM_031220|PITPNM3|83394|PITPNM family member 3	0.671691	CTCF.p2:5:0.672
chr19	8571144	8571253	reg1015356.p2	8.785	+	TSC_hg19_v1_chr19_-_8567525 AB590302 DQ891057 EU176810 BC028012 AK308227 AJ272324 NM_032152	-3687	-	AK310661 TSC_hg19_v1_chr19_+_8509876 BC018916 CU674058 AB209733	-61315	+	TSC_hg19_v1_chr19_+_8509869 L03532 BC058893 BC019580 L32611	-61327	+	BC071937 BC007310 TSC_hg19_v1_chr19_-_8579045 AK074191 AK225034 NM_001146175 NM_032370	7843	-	AJ310570 AK092877 AX747785 TSC_hg19_v1_chr19_-_8642295	71066	-	TSC_hg19_v1_chr19_-_8642306 BC028071	71103	-	DQ891057|PRAM1|84106|PML-RARA regulated adaptor molecule 1##EU176810|PRAM1|84106|PML-RARA regulated adaptor molecule 1##BC028012|PRAM1|84106|PML-RARA regulated adaptor molecule 1##AK308227|PRAM1|84106|PML-RARA regulated adaptor molecule 1##AJ272324|PRAM1|84106|PML-RARA regulated adaptor molecule 1##NM_032152|PRAM1|84106|PML-RARA regulated adaptor molecule 1##BC018916|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M##AB209733|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M##L03532|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M##BC058893|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M##BC019580|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M##L32611|HNRNPM|4670|heterogeneous nuclear ribonucleoprotein M##BC071937|ZNF414|84330|zinc finger protein 414##BC007310|ZNF414|84330|zinc finger protein 414##AK074191|ZNF414|84330|zinc finger protein 414##AK225034|ZNF414|84330|zinc finger protein 414##NM_001146175|ZNF414|84330|zinc finger protein 414##NM_032370|ZNF414|84330|zinc finger protein 414##AJ310570|MYO1F|4542|myosin IF##BC028071|MYO1F|4542|myosin IF	0.998075	CTCF.p2:1:0.998
chr3	122473836	122473948	reg1014594.p2	8.785	+	TSC_hg19_v1_chr3_+_122399703 NM_017554 AK304269	-74194	+	BC101701 BC101703 BC143573 AK097916 NM_152615	-139400	+	TSC_hg19_v1_chr3_+_122296496 AK309863 NM_001113523 BX647656 DQ063586	-177412	+	CU680100 CU687786 DQ893066 DQ896319 AB590214 AK096705 BC063629 TSC_hg19_v1_chr3_-_122512667 AF400663 BC011897 AK289410 NM_024610	38711	-	TSC_hg19_v1_chr3_+_122513913 NM_032839 AK027690 AK291176 BC039821 BC033738	40024	+	TSC_hg19_v1_chr3_+_122513981 AK075158	40112	+	NM_017554|PARP14|54625|poly (ADP-ribose) polymerase family, member 14##AK304269|PARP14|54625|poly (ADP-ribose) polymerase family, member 14##BC101701|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BC101703|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BC143573|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##AK097916|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##NM_152615|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##NM_001113523|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BX647656|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##DQ063586|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##DQ893066|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##DQ896319|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK096705|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC063629|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AF400663|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC011897|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK289410|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##NM_024610|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##NM_032839|DIRC2|84925|disrupted in renal carcinoma 2##AK027690|DIRC2|84925|disrupted in renal carcinoma 2##AK291176|DIRC2|84925|disrupted in renal carcinoma 2##BC039821|DIRC2|84925|disrupted in renal carcinoma 2##BC033738|DIRC2|84925|disrupted in renal carcinoma 2##AK075158|DIRC2|84925|disrupted in renal carcinoma 2	0.024291	
chr4	86005695	86005832	reg1015211.p2	8.785	+	NM_014991	-118220	-	NM_001263 U65887	-501670	+	NM_006168	-586377	-	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	390580	+	TSC_hg19_v1_chr4_+_86699850 NM_001042669	694085	+	BC098580 TSC_hg19_v1_chr4_+_86699865 AK098193	694135	+	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_006168|NKX6-1|4825|NK6 homeobox 1##NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24##NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24##BC098580|ARHGAP24|83478|Rho GTPase activating protein 24##AK098193|ARHGAP24|83478|Rho GTPase activating protein 24	0.995146	CTCF.p2:-20:0.995
chr14	45315550	45315680	reg1013650.p2	8.784	+	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	-339140	-	NM_152447 AK096627	-3238848	+	BC053537 BC068566 BC030611 NM_203301	-5413954	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	50883	+	BC121009 BC121010 TSC_hg19_v1_chr14_-_45431102	115481	-	TSC_hg19_v1_chr14_-_45431142 AK289855 NM_017658	115535	-	AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28##BC121009|KLHL28|54813|kelch-like 28 (Drosophila)##BC121010|KLHL28|54813|kelch-like 28 (Drosophila)##AK289855|KLHL28|54813|kelch-like 28 (Drosophila)##NM_017658|KLHL28|54813|kelch-like 28 (Drosophila)	0.959714	CTCF.p2:9:0.960
chr17	2952115	2952228	reg1016410.p1	8.784	+	AJ628446 AJ628447 NM_001100398 NM_015085 TSC_hg19_v1_chr17_+_2699761 CR627427 BC140870 BC140871	-252418	+	AK124640 TSC_hg19_v1_chr17_+_2680496	-271748	+	NM_015229 TSC_hg19_v1_chr17_-_2615039	-337184	-	BC106876 NM_014566 AB529301	14756	-	AB529300 BC069552 BC106735 BC106736 NM_002548	44118	-	BC069379 NM_003555 BC095520 AB529303	78730	-	AJ628446|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AJ628447|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_001100398|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015085|RAP1GAP2|23108|RAP1 GTPase activating protein 2##CR627427|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140870|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140871|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AK124640|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015229|KIAA0664|23277|KIAA0664##BC106876|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##NM_014566|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1##NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1##BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	0.832702	CTCF.p2:-16:0.813
chr2	125561700	125561871	reg1015241.p1	8.784	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-778921	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-3048548	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-3067320	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	1851922	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	1852007	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	2302956	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.985775	CTCF.p2:-1:0.986
chr8	12891485	12891607	reg1014109.p1	8.784	+	AB040889 NM_001099677	-21774	+	AK296010 NM_020844	-88380	+	TSC_hg19_v1_chr8_-_12612974 NM_152271	-278542	-	AK299049 NM_001164271	82206	-	DQ092384 DQ092383 TSC_hg19_v1_chr8_-_12990637	99023	-	AK289734 TSC_hg19_v1_chr8_-_12990794 DQ092382 AF026219 BC095415 NM_006094	99230	-	AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK299049|DLC1|10395|deleted in liver cancer 1##NM_001164271|DLC1|10395|deleted in liver cancer 1##DQ092384|DLC1|10395|deleted in liver cancer 1##DQ092383|DLC1|10395|deleted in liver cancer 1##AK289734|DLC1|10395|deleted in liver cancer 1##DQ092382|DLC1|10395|deleted in liver cancer 1##AF026219|DLC1|10395|deleted in liver cancer 1##BC095415|DLC1|10395|deleted in liver cancer 1##NM_006094|DLC1|10395|deleted in liver cancer 1	0.996091	CTCF.p2:39:0.996
chr11	17549790	17549906	reg1016227.p1	8.783	+	TSC_hg19_v1_chr11_-_17498427 NM_000352	-51412	-	U63421 HM635782 TSC_hg19_v1_chr11_-_17498355 AK297560 AF087138 L78207 AB209084	-51505	-	BC040617 AK301550 NM_001166290 TSC_hg19_v1_chr11_-_17410958	-138938	-	CU677569 TSC_hg19_v1_chr11_-_17565964 AK290788 AK300936 AB018687 BC016057 AF039699 AF039700 AK225614 NM_005709 NM_153676	16069	-	NM_002478 AK314968 TSC_hg19_v1_chr11_+_17741117 BC000353 X56677 BC064493 AB463907 BT007157	191371	+	NM_001112741 NM_004976 AB529092	207671	+	NM_000352|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##U63421|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##HM635782|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AK297560|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AF087138|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##L78207|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AB209084|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##BC040617|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##AK301550|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##NM_001166290|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##AK290788|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK300936|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AB018687|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##BC016057|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039699|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039700|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK225614|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_005709|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_153676|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_002478|MYOD1|4654|myogenic differentiation 1##AK314968|MYOD1|4654|myogenic differentiation 1##X56677|MYOD1|4654|myogenic differentiation 1##BC064493|MYOD1|4654|myogenic differentiation 1##BT007157|MYOD1|4654|myogenic differentiation 1##NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1	0.994788	CTCF.p2:14:0.995
chr21	39073073	39073217	reg1013016.p1	8.783	+	NM_130438 NM_001396 U52373 D85759 U58496	-280525	+	D86550 NM_130436	-281939	+	AF108830 NM_101395 AB015283 AB015284	-333275	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	215566	-	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	420256	-	BC013327 NM_002243	555518	+	NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.999079	CTCF.p2:-17:0.999
chr5	139154803	139154923	reg1013098.p1	8.783	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	-94471	+	AF151029 TSC_hg19_v1_chr5_+_139060229	-94651	+	BC002490 TSC_hg19_v1_chr5_+_139060088 AB463548 GQ379202 AK314420	-94779	+	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	20543	+	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	267865	-	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	267982	-	DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##BC002490|CXXC5|51523|CXXC finger protein 5##GQ379202|CXXC5|51523|CXXC finger protein 5##AK314420|CXXC5|51523|CXXC finger protein 5##AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2	0.0	
chr8	62380194	62380308	reg1015092.p1	8.783	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	-179701	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-788849	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-788963	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	222095	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	246767	-	TSC_hg19_v1_chr8_-_62627152 BC015518 BC025236 AK298577	246887	-	NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase##BC015518|ASPH|444|aspartate beta-hydroxylase##BC025236|ASPH|444|aspartate beta-hydroxylase##AK298577|ASPH|444|aspartate beta-hydroxylase	0.976566	CTCF.p2:-5:0.977
chr17	32052853	32052959	reg1013925.p1	8.782	+	AL834182 NM_183377	-432901	-	AF216311 NM_173847 BC100886 BC100887	-734004	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-797703	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	430781	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	529425	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	544367	+	AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7	0.354792	CTCF.p2:-5:0.355
chr5	146041836	146041948	reg1015368.p1	8.782	+	AB463658 AY351676 NM_194251 AK122627	-146179	-	TSC_hg19_v1_chr5_+_145826895 NM_001040006 NM_006706 AK304319 BC006109 BC014151 BC062351 AK126455 BC111727 AB209910 AB464301 AF017789	-214998	+	BC104923 BC112207 NM_002700 AB464668 EU446649 HQ258176	-323262	+	CU689232 DQ891785 DQ894969 TSC_hg19_v1_chr5_-_146257712	215782	-	AK314810 M64930 NM_004576 AK056192 NM_181675 AK289717 BX647887 NM_001127381	216407	-	BC031790 NM_181674 NM_181676	393752	-	AY351676|GPR151|134391|G protein-coupled receptor 151##NM_194251|GPR151|134391|G protein-coupled receptor 151##NM_001040006|TCERG1|10915|transcription elongation regulator 1##NM_006706|TCERG1|10915|transcription elongation regulator 1##AK304319|TCERG1|10915|transcription elongation regulator 1##BC006109|TCERG1|10915|transcription elongation regulator 1##BC014151|TCERG1|10915|transcription elongation regulator 1##BC062351|TCERG1|10915|transcription elongation regulator 1##AK126455|TCERG1|10915|transcription elongation regulator 1##BC111727|TCERG1|10915|transcription elongation regulator 1##AB209910|TCERG1|10915|transcription elongation regulator 1##AF017789|TCERG1|10915|transcription elongation regulator 1##BC104923|POU4F3|5459|POU class 4 homeobox 3##BC112207|POU4F3|5459|POU class 4 homeobox 3##NM_002700|POU4F3|5459|POU class 4 homeobox 3##EU446649|POU4F3|5459|POU class 4 homeobox 3##HQ258176|POU4F3|5459|POU class 4 homeobox 3##DQ891785|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##DQ894969|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK314810|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##M64930|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_004576|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK056192|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181675|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK289717|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BX647887|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_001127381|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	0.970467	CTCF.p2:12:0.970
chr7	29146138	29146251	reg1014899.p2	8.782	+	AK293803 NM_014817 TSC_hg19_v1_chr7_-_28998036	-148162	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	-148265	-	CU690330 TSC_hg19_v1_chr7_-_28997732	-148497	-	AF106704 TSC_hg19_v1_chr7_-_29186093 AF282617 AK225545 BC016838 AK075433 NM_019029 NM_031311	39919	-	TSC_hg19_v1_chr7_+_29234115 NM_004067	87929	+	U28926 AK313021 TSC_hg19_v1_chr7_+_29234428 BC112155 AK293959 AB529082 EU732759 EU732760 EU732761 EU732762 EU732763 EU732764 EU732765 EU732766	88247	+	NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats##AF106704|CPVL|54504|carboxypeptidase, vitellogenic-like##AF282617|CPVL|54504|carboxypeptidase, vitellogenic-like##AK225545|CPVL|54504|carboxypeptidase, vitellogenic-like##BC016838|CPVL|54504|carboxypeptidase, vitellogenic-like##AK075433|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_019029|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_031311|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_004067|CHN2|1124|chimerin (chimaerin) 2##U28926|CHN2|1124|chimerin (chimaerin) 2##AK313021|CHN2|1124|chimerin (chimaerin) 2##BC112155|CHN2|1124|chimerin (chimaerin) 2##AK293959|CHN2|1124|chimerin (chimaerin) 2##EU732759|CHN2|1124|chimerin (chimaerin) 2##EU732760|CHN2|1124|chimerin (chimaerin) 2##EU732761|CHN2|1124|chimerin (chimaerin) 2##EU732762|CHN2|1124|chimerin (chimaerin) 2##EU732763|CHN2|1124|chimerin (chimaerin) 2##EU732764|CHN2|1124|chimerin (chimaerin) 2##EU732765|CHN2|1124|chimerin (chimaerin) 2##EU732766|CHN2|1124|chimerin (chimaerin) 2	0.883649	CTCF.p2:-1:0.884
chr15	63074352	63074496	reg1015952.p1	8.781	+	TSC_hg19_v1_chr15_+_63050761 BX648144 BX648146	-23650	+	AF402000 NM_015059	-134915	+	TSC_hg19_v1_chr15_+_62682748 AB621808	-391706	+	TSC_hg19_v1_chr15_+_63334949 NM_000366 NM_001018004 NM_001018005 NM_001018006 NM_001018007 NM_001018020 AK092051 AX747334 BC007433 AK057989 AK299387 AK129882 AK131384 AK309170 AL050179 M19713 DQ893259 DQ896588 CU675655 AY640414 AY640415	260478	+	M19714 TSC_hg19_v1_chr15_+_63335095	260666	+	L02923 TSC_hg19_v1_chr15_+_63335956	261534	+	BX648144|TLN2|83660|talin 2##BX648146|TLN2|83660|talin 2##AF402000|TLN2|83660|talin 2##NM_015059|TLN2|83660|talin 2##AB621808|TLN2|83660|talin 2##NM_000366|TPM1|7168|tropomyosin 1 (alpha)##NM_001018004|TPM1|7168|tropomyosin 1 (alpha)##NM_001018005|TPM1|7168|tropomyosin 1 (alpha)##NM_001018006|TPM1|7168|tropomyosin 1 (alpha)##NM_001018007|TPM1|7168|tropomyosin 1 (alpha)##NM_001018020|TPM1|7168|tropomyosin 1 (alpha)##AK092051|TPM1|7168|tropomyosin 1 (alpha)##BC007433|TPM1|7168|tropomyosin 1 (alpha)##AK057989|TPM1|7168|tropomyosin 1 (alpha)##AK299387|TPM1|7168|tropomyosin 1 (alpha)##AK129882|TPM1|7168|tropomyosin 1 (alpha)##AK131384|TPM1|7168|tropomyosin 1 (alpha)##AK309170|TPM1|7168|tropomyosin 1 (alpha)##AL050179|TPM1|7168|tropomyosin 1 (alpha)##M19713|TPM1|7168|tropomyosin 1 (alpha)##DQ893259|TPM1|7168|tropomyosin 1 (alpha)##DQ896588|TPM1|7168|tropomyosin 1 (alpha)##AY640414|TPM1|7168|tropomyosin 1 (alpha)##AY640415|TPM1|7168|tropomyosin 1 (alpha)##M19714|TPM1|7168|tropomyosin 1 (alpha)##L02923|TPM1|7168|tropomyosin 1 (alpha)	0.060458	
chr6	31160431	31160543	reg1016138.p1	8.781	+	AM851126 AM851121 AM851123 AM851125 AY730056 FM177952 FM177953 FM177954 FM177955 FM177956 FM177959 FM177960 FM177961 FM177962 FM177963 FM177965 FM177968 GU480808 GU480809 GU480810 GU480811 GU480812 GU480813 GU480815 GU480816 GU480817 GU480818 GU480819 GU480820 GU480821 GU480822 GU480823 GU480824 GU480825 GU480826 GU480827 GU480828 GU480829 GU480830 GU480844 GU480856 GU480886 GU480888 GU480891 GU480897 GU480915 HQ122658 HQ122659 HQ122660 HQ122661 HQ122662 HQ122663 HQ122664 HQ122665 HQ122666 HQ122667 HQ122668 HQ122669 HQ122670 HQ122671 HQ122672 HQ122673 HQ122674 HQ122675 HQ122860 HQ122904 AB528279 HQ258221 HQ258573 BC069246 Z11898 AM851115 AM851118 AM851116 AM851117 AM851119 AM851120 BC117435 BC117437 NM_002701	-22172	-	DQ486515 DQ486516 NM_001173531 NM_203289	-25873	-	TSC_hg19_v1_chr6_+_31126735 S53374	-33686	+	M28207 M24096 M21963 U07230 Z47377 U74387 AJ005199 AJ440716 AJ537578 D49820 D83741 FN662479 M11886 M24031 U06835 M28206 M26712 L20091 CU675811 BC007814 BC010542 AB590141 AF168611 AF196489 AF405691 AJ010748 AJ010749 AM237285 AY732487 D12471 D31817 D38526 D49552 D49819 D50852 D50853 D50854 D64145 D64146 D64147 D64148 D64149 D64150 D64151 D64152 D83029 D83030 D83031 DQ891896 DQ895082 L38251 M26429 M26430 M84171 M84173 M84174 M84386 M99388 M99389 M99390 U06487 U06695 U06696 U09853 U41386 U41420 U57028 U62824 X73518 X76189 X78343 X82122 X83401 X87841 X96582 X97321 X98742 Y09156 Y10520 Y11843 Z15144 Z33459 Z46809 Z46810 Z83247 M28160 X58536 BC002463 X67818 X70856 X70857 TSC_hg19_v1_chr6_-_31239870 BC004489 BC033293 BC008457 M24097 AK130592 AK301283 AK304527 X83394 AK024836 BC041078	79199	-	TSC_hg19_v1_chr6_-_31239888 NM_001243042 NM_002117	79413	-	TSC_hg19_v1_chr6_-_31324569 U18661 M27540 AY221104 U74386 U28759 AF081275 AJ002675 AJ002676 AJ002677 AJ003063 AJ223602 AY040668 AY569160 FN662479 HM989017 HM989018 L42545 L47338 L47986 L48400 L49343 L63544 L76252 L76931 L76933 L76934 L76935 L77114 L79935 L79936 L79937 U06697 U16298 U18789 U32678 U34619 U34810 U43337 Y07710 AJ276427 M62852 M83191 M83193 M83194 M83195 U58110	164162	-	AM851126|POU5F1|5460|POU class 5 homeobox 1##AM851121|POU5F1|5460|POU class 5 homeobox 1##AM851123|POU5F1|5460|POU class 5 homeobox 1##AM851125|POU5F1|5460|POU class 5 homeobox 1##FM177952|POU5F1|5460|POU class 5 homeobox 1##FM177953|POU5F1|5460|POU class 5 homeobox 1##FM177954|POU5F1|5460|POU class 5 homeobox 1##FM177955|POU5F1|5460|POU class 5 homeobox 1##FM177956|POU5F1|5460|POU class 5 homeobox 1##FM177959|POU5F1|5460|POU class 5 homeobox 1##FM177960|POU5F1|5460|POU class 5 homeobox 1##FM177961|POU5F1|5460|POU class 5 homeobox 1##FM177962|POU5F1|5460|POU class 5 homeobox 1##FM177963|POU5F1|5460|POU class 5 homeobox 1##FM177965|POU5F1|5460|POU class 5 homeobox 1##FM177968|POU5F1|5460|POU class 5 homeobox 1##GU480808|POU5F1|5460|POU class 5 homeobox 1##GU480809|POU5F1|5460|POU class 5 homeobox 1##GU480810|POU5F1|5460|POU class 5 homeobox 1##GU480811|POU5F1|5460|POU class 5 homeobox 1##GU480812|POU5F1|5460|POU class 5 homeobox 1##GU480813|POU5F1|5460|POU class 5 homeobox 1##GU480815|POU5F1|5460|POU class 5 homeobox 1##GU480816|POU5F1|5460|POU class 5 homeobox 1##GU480817|POU5F1|5460|POU class 5 homeobox 1##GU480818|POU5F1|5460|POU class 5 homeobox 1##GU480819|POU5F1|5460|POU class 5 homeobox 1##GU480820|POU5F1|5460|POU class 5 homeobox 1##GU480821|POU5F1|5460|POU class 5 homeobox 1##GU480822|POU5F1|5460|POU class 5 homeobox 1##GU480823|POU5F1|5460|POU class 5 homeobox 1##GU480824|POU5F1|5460|POU class 5 homeobox 1##GU480825|POU5F1|5460|POU class 5 homeobox 1##GU480826|POU5F1|5460|POU class 5 homeobox 1##GU480827|POU5F1|5460|POU class 5 homeobox 1##GU480828|POU5F1|5460|POU class 5 homeobox 1##GU480829|POU5F1|5460|POU class 5 homeobox 1##GU480830|POU5F1|5460|POU class 5 homeobox 1##GU480886|POU5F1B|5462|POU class 5 homeobox 1B##GU480888|POU5F1P3|642559|POU class 5 homeobox 1 pseudogene 3##GU480891|POU5F1P3|642559|POU class 5 homeobox 1 pseudogene 3##GU480897|POU5F1P3|642559|POU class 5 homeobox 1 pseudogene 3##GU480915|POU5F1P3|642559|POU class 5 homeobox 1 pseudogene 3##HQ122658|POU5F1|5460|POU class 5 homeobox 1##HQ122659|POU5F1|5460|POU class 5 homeobox 1##HQ122660|POU5F1|5460|POU class 5 homeobox 1##HQ122661|POU5F1|5460|POU class 5 homeobox 1##HQ122662|POU5F1|5460|POU class 5 homeobox 1##HQ122663|POU5F1|5460|POU class 5 homeobox 1##HQ122664|POU5F1|5460|POU class 5 homeobox 1##HQ122665|POU5F1|5460|POU class 5 homeobox 1##HQ122666|POU5F1|5460|POU class 5 homeobox 1##HQ122667|POU5F1|5460|POU class 5 homeobox 1##HQ122668|POU5F1|5460|POU class 5 homeobox 1##HQ122669|POU5F1|5460|POU class 5 homeobox 1##HQ122670|POU5F1|5460|POU class 5 homeobox 1##HQ122671|POU5F1|5460|POU class 5 homeobox 1##HQ122672|POU5F1|5460|POU class 5 homeobox 1##HQ122673|POU5F1|5460|POU class 5 homeobox 1##HQ122674|POU5F1|5460|POU class 5 homeobox 1##HQ122675|POU5F1|5460|POU class 5 homeobox 1##HQ122860|POU5F1P4|645682|POU class 5 homeobox 1 pseudogene 4##HQ258221|POU5F1|5460|POU class 5 homeobox 1##HQ258573|POU5F1|5460|POU class 5 homeobox 1##BC069246|POU5F1|5460|POU class 5 homeobox 1##Z11898|POU5F1|5460|POU class 5 homeobox 1##AM851115|POU5F1|5460|POU class 5 homeobox 1##AM851118|POU5F1|5460|POU class 5 homeobox 1##AM851116|POU5F1|5460|POU class 5 homeobox 1##AM851117|POU5F1|5460|POU class 5 homeobox 1##AM851119|POU5F1|5460|POU class 5 homeobox 1##AM851120|POU5F1|5460|POU class 5 homeobox 1##BC117435|POU5F1|5460|POU class 5 homeobox 1##BC117437|POU5F1|5460|POU class 5 homeobox 1##NM_002701|POU5F1|5460|POU class 5 homeobox 1##DQ486515|POU5F1|5460|POU class 5 homeobox 1##DQ486516|POU5F1|5460|POU class 5 homeobox 1##NM_001173531|POU5F1|5460|POU class 5 homeobox 1##NM_203289|POU5F1|5460|POU class 5 homeobox 1##S53374|TCF19|6941|transcription factor 19##M28207|HLA-C|3107|major histocompatibility complex, class I, C##M24096|HLA-C|3107|major histocompatibility complex, class I, C##M21963|HLA-C|3107|major histocompatibility complex, class I, C##U07230|HLA-C|3107|major histocompatibility complex, class I, C##U74387|HLA-B|3106|major histocompatibility complex, class I, B##AJ005199|HLA-C|3107|major histocompatibility complex, class I, C##AJ440716|HLA-C|3107|major histocompatibility complex, class I, C##AJ537578|HLA-C|3107|major histocompatibility complex, class I, C##D83741|HLA-C|3107|major histocompatibility complex, class I, C##M11886|HLA-C|3107|major histocompatibility complex, class I, C##M24031|HLA-C|3107|major histocompatibility complex, class I, C##M28206|HLA-C|3107|major histocompatibility complex, class I, C##M26712|HLA-C|3107|major histocompatibility complex, class I, C##BC007814|HLA-C|3107|major histocompatibility complex, class I, C##BC010542|HLA-C|3107|major histocompatibility complex, class I, C##AF168611|HLA-C|3107|major histocompatibility complex, class I, C##AF196489|HLA-C|3107|major histocompatibility complex, class I, C##AF405691|HLA-C|3107|major histocompatibility complex, class I, C##AJ010748|HLA-C|3107|major histocompatibility complex, class I, C##AJ010749|HLA-C|3107|major histocompatibility complex, class I, C##AM237285|HLA-C|3107|major histocompatibility complex, class I, C##AY732487|HLA-C|3107|major histocompatibility complex, class I, C##D38526|HLA-C|3107|major histocompatibility complex, class I, C##D49552|HLA-C|3107|major histocompatibility complex, class I, C##D49819|HLA-C|3107|major histocompatibility complex, class I, C##D50852|HLA-C|3107|major histocompatibility complex, class I, C##D50853|HLA-C|3107|major histocompatibility complex, class I, C##D50854|HLA-C|3107|major histocompatibility complex, class I, C##D64145|HLA-C|3107|major histocompatibility complex, class I, C##D64146|HLA-C|3107|major histocompatibility complex, class I, C##D64147|HLA-C|3107|major histocompatibility complex, class I, C##D64148|HLA-C|3107|major histocompatibility complex, class I, C##D64150|HLA-C|3107|major histocompatibility complex, class I, C##D64151|HLA-C|3107|major histocompatibility complex, class I, C##D64152|HLA-C|3107|major histocompatibility complex, class I, C##D83029|HLA-C|3107|major histocompatibility complex, class I, C##D83030|HLA-C|3107|major histocompatibility complex, class I, C##DQ891896|HLA-C|3107|major histocompatibility complex, class I, C##DQ895082|HLA-C|3107|major histocompatibility complex, class I, C##L38251|HLA-C|3107|major histocompatibility complex, class I, C##M26429|HLA-C|3107|major histocompatibility complex, class I, C##M26430|HLA-C|3107|major histocompatibility complex, class I, C##M84171|HLA-C|3107|major histocompatibility complex, class I, C##M84173|HLA-C|3107|major histocompatibility complex, class I, C##M84174|HLA-C|3107|major histocompatibility complex, class I, C##M84386|HLA-C|3107|major histocompatibility complex, class I, C##M99389|HLA-C|3107|major histocompatibility complex, class I, C##M99390|HLA-C|3107|major histocompatibility complex, class I, C##U06695|HLA-C|3107|major histocompatibility complex, class I, C##U06696|HLA-C|3107|major histocompatibility complex, class I, C##U09853|HLA-C|3107|major histocompatibility complex, class I, C##U41386|HLA-C|3107|major histocompatibility complex, class I, C##U41420|HLA-C|3107|major histocompatibility complex, class I, C##U57028|HLA-C|3107|major histocompatibility complex, class I, C##U62824|HLA-C|3107|major histocompatibility complex, class I, C##X76189|HLA-C|3107|major histocompatibility complex, class I, C##X82122|HLA-C|3107|major histocompatibility complex, class I, C##X83401|HLA-B|3106|major histocompatibility complex, class I, B##X97321|HLA-C|3107|major histocompatibility complex, class I, C##X98742|HLA-C|3107|major histocompatibility complex, class I, C##Y10520|HLA-C|3107|major histocompatibility complex, class I, C##Y11843|HLA-C|3107|major histocompatibility complex, class I, C##Z15144|HLA-C|3107|major histocompatibility complex, class I, C##Z33459|HLA-C|3107|major histocompatibility complex, class I, C##Z46809|HLA-C|3107|major histocompatibility complex, class I, C##Z46810|HLA-C|3107|major histocompatibility complex, class I, C##Z83247|HLA-C|3107|major histocompatibility complex, class I, C##M28160|HLA-C|3107|major histocompatibility complex, class I, C##X58536|HLA-C|3107|major histocompatibility complex, class I, C##BC002463|HLA-C|3107|major histocompatibility complex, class I, C##X70856|HLA-C|3107|major histocompatibility complex, class I, C##X70857|HLA-C|3107|major histocompatibility complex, class I, C##BC004489|HLA-C|3107|major histocompatibility complex, class I, C##BC033293|HLA-C|3107|major histocompatibility complex, class I, C##BC008457|HLA-C|3107|major histocompatibility complex, class I, C##M24097|HLA-C|3107|major histocompatibility complex, class I, C##AK130592|HLA-C|3107|major histocompatibility complex, class I, C##AK301283|HLA-C|3107|major histocompatibility complex, class I, C##AK304527|HLA-C|3107|major histocompatibility complex, class I, C##X83394|HLA-C|3107|major histocompatibility complex, class I, C##AK024836|HLA-C|3107|major histocompatibility complex, class I, C##BC041078|HLA-C|3107|major histocompatibility complex, class I, C##NM_001243042|HLA-C|3107|major histocompatibility complex, class I, C##NM_002117|HLA-C|3107|major histocompatibility complex, class I, C##U18661|HLA-B|3106|major histocompatibility complex, class I, B##M27540|HLA-B|3106|major histocompatibility complex, class I, B##AY221104|HLA-B|3106|major histocompatibility complex, class I, B##U74386|HLA-B|3106|major histocompatibility complex, class I, B##U28759|HLA-B|3106|major histocompatibility complex, class I, B##AJ002675|HLA-B|3106|major histocompatibility complex, class I, B##AJ002676|HLA-B|3106|major histocompatibility complex, class I, B##AJ002677|HLA-B|3106|major histocompatibility complex, class I, B##AJ003063|HLA-B|3106|major histocompatibility complex, class I, B##AJ223602|HLA-B|3106|major histocompatibility complex, class I, B##AY040668|HLA-B|3106|major histocompatibility complex, class I, B##AY569160|HLA-B|3106|major histocompatibility complex, class I, B##HM989017|HLA-B|3106|major histocompatibility complex, class I, B##L42545|HLA-B|3106|major histocompatibility complex, class I, B##L47338|HLA-B|3106|major histocompatibility complex, class I, B##L47986|HLA-B|3106|major histocompatibility complex, class I, B##L48400|HLA-B|3106|major histocompatibility complex, class I, B##L49343|HLA-B|3106|major histocompatibility complex, class I, B##L63544|HLA-B|3106|major histocompatibility complex, class I, B##L76252|HLA-B|3106|major histocompatibility complex, class I, B##L76933|HLA-B|3106|major histocompatibility complex, class I, B##L76935|HLA-B|3106|major histocompatibility complex, class I, B##L77114|HLA-C|3107|major histocompatibility complex, class I, C##L79935|HLA-B|3106|major histocompatibility complex, class I, B##L79936|HLA-B|3106|major histocompatibility complex, class I, B##L79937|HLA-B|3106|major histocompatibility complex, class I, B##U06697|HLA-B|3106|major histocompatibility complex, class I, B##U16298|HLA-B|3106|major histocompatibility complex, class I, B##U32678|HLA-B|3106|major histocompatibility complex, class I, B##U34619|HLA-B|3106|major histocompatibility complex, class I, B##U34810|HLA-B|3106|major histocompatibility complex, class I, B##Y07710|HLA-B|3106|major histocompatibility complex, class I, B##AJ276427|HLA-B|3106|major histocompatibility complex, class I, B##M83191|HLA-B|3106|major histocompatibility complex, class I, B##M83193|HLA-B|3106|major histocompatibility complex, class I, B##M83194|HLA-B|3106|major histocompatibility complex, class I, B##M83195|HLA-B|3106|major histocompatibility complex, class I, B##U58110|HLA-B|3106|major histocompatibility complex, class I, B	0.998737	CTCF.p2:5:0.999
chr9	107688823	107688950	reg1011856.p2	8.781	+	AB037924 TSC_hg19_v1_chr9_-_107666055	-22835	-	AB055982 AB445477 TSC_hg19_v1_chr9_-_107665989	-22889	-	AK002137 BC017914 BX647652 NM_018376 AK310397 BC005202	-162434	+	BC146856 TSC_hg19_v1_chr9_-_107690419 AF285167 BC034824 BC141816 BC142693 AK022254	1498	-	AK024328 TSC_hg19_v1_chr9_-_107690437 AF258627	1594	-	NM_005502 TSC_hg19_v1_chr9_-_107690527	1643	-	AB037924|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AB055982|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AB445477|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AK002137|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC017914|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BX647652|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##NM_018376|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##AK310397|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC005202|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	0.0	
chr10	96204168	96204303	reg1014670.p1	8.780	+	TSC_hg19_v1_chr10_+_96162276 AB011180 AB449898	-41914	+	NM_015188 TSC_hg19_v1_chr10_+_96162185	-42049	+	AB077992 TSC_hg19_v1_chr10_-_96122697 BC049850 NM_022451 AK091246 AX746873 BC030999 AK292520	-81559	-	TSC_hg19_v1_chr10_+_96305574 AK314485 BX538033 BC068440 AK308331 BC105606 AF155827 NM_018063 BC111789 AB527159 AB102716 AB102717 AB102718 AB102719 AB102720 AB102721 AB102722 AB102723 AB113248 AB113249	101364	+	NM_000772 NM_001128925 M61856 BC069666 BC096257 BC096258 BC096259 BC096260 M61853 TSC_hg19_v1_chr10_+_96443551 AK223510 AK313403 CU686960	239178	+	M61854 AB463557 NM_000769	318224	+	AB011180|TBC1D12|23232|TBC1 domain family, member 12##AB449898|TBC1D12|23232|TBC1 domain family, member 12##NM_015188|TBC1D12|23232|TBC1 domain family, member 12##AB077992|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##BC049850|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##NM_022451|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##AK091246|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##BC030999|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##AK292520|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##AK314485|HELLS|3070|helicase, lymphoid-specific##BX538033|HELLS|3070|helicase, lymphoid-specific##BC068440|HELLS|3070|helicase, lymphoid-specific##AK308331|HELLS|3070|helicase, lymphoid-specific##BC105606|HELLS|3070|helicase, lymphoid-specific##AF155827|HELLS|3070|helicase, lymphoid-specific##NM_018063|HELLS|3070|helicase, lymphoid-specific##BC111789|HELLS|3070|helicase, lymphoid-specific##AB102716|HELLS|3070|helicase, lymphoid-specific##AB102717|HELLS|3070|helicase, lymphoid-specific##AB102718|HELLS|3070|helicase, lymphoid-specific##AB102719|HELLS|3070|helicase, lymphoid-specific##AB102720|HELLS|3070|helicase, lymphoid-specific##AB102721|HELLS|3070|helicase, lymphoid-specific##AB102722|HELLS|3070|helicase, lymphoid-specific##AB102723|HELLS|3070|helicase, lymphoid-specific##AB113248|HELLS|3070|helicase, lymphoid-specific##AB113249|HELLS|3070|helicase, lymphoid-specific##NM_000772|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##NM_001128925|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##M61856|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC069666|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096257|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096258|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096259|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096260|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##M61853|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##AK223510|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##AK313403|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##M61854|CYP2C19|1557|cytochrome P450, family 2, subfamily C, polypeptide 19##NM_000769|CYP2C19|1557|cytochrome P450, family 2, subfamily C, polypeptide 19	0.922963	CTCF.p2:20:0.923
chr10	98797225	98797362	reg1017725.p1	8.780	+	AK126886 BC024315 NM_015652 CU692918	-56226	+	TSC_hg19_v1_chr10_+_98592758 NM_032440 AL834245 AB058698	-204565	+	TSC_hg19_v1_chr10_-_98592186 AB593180	-205093	-	AY029183 AB383997 TSC_hg19_v1_chr10_-_98945570	148181	-	TSC_hg19_v1_chr10_-_98945606 BC146851	148302	-	AB017167 TSC_hg19_v1_chr10_-_98945702 BC028105 AB011537 BC146761 NM_003061 BC139909	148392	-	AK126886|C10orf12|26148|chromosome 10 open reading frame 12##BC024315|C10orf12|26148|chromosome 10 open reading frame 12##NM_015652|C10orf12|26148|chromosome 10 open reading frame 12##NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor##AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor##AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor##AY029183|SLIT1|6585|slit homolog 1 (Drosophila)##BC146851|SLIT1|6585|slit homolog 1 (Drosophila)##AB017167|SLIT1|6585|slit homolog 1 (Drosophila)##BC028105|SLIT1|6585|slit homolog 1 (Drosophila)##AB011537|SLIT1|6585|slit homolog 1 (Drosophila)##BC146761|SLIT1|6585|slit homolog 1 (Drosophila)##NM_003061|SLIT1|6585|slit homolog 1 (Drosophila)##BC139909|SLIT1|6585|slit homolog 1 (Drosophila)	0.99811	CTCF.p2:-3:0.998
chr12	20530013	20530165	reg1017524.p1	8.780	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	-7891	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-936901	+	TSC_hg19_v1_chr12_+_19592783 AB209384	-937294	+	AK308317 NM_001244683	194708	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	318406	+	BC058006 BC105597 NM_019844 BC022843 AK055874 BC070264	433559	+	BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC058006|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC105597|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_019844|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC022843|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##AK055874|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC070264|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3	0.021164	
chr22	17652791	17652911	reg1007927.p2	8.780	+	AF273270 NM_017829	-6675	-	TSC_hg19_v1_chr22_+_17640246 AF307448	-12587	+	NM_033070 TSC_hg19_v1_chr22_-_17640168	-12672	-	TSC_hg19_v1_chr22_-_17680487 AK027682 AK074702 NM_177405	27663	-	AF190746 NM_017424	37927	-	AK314321 TSC_hg19_v1_chr22_-_17700267 AK295174 AK292689	47512	-	AF273270|CECR5|27440|cat eye syndrome chromosome region, candidate 5##NM_017829|CECR5|27440|cat eye syndrome chromosome region, candidate 5##AF307448|CECR5-AS1|100130717|CECR5 antisense RNA 1 (non-protein coding)##NM_033070|CECR5|27440|cat eye syndrome chromosome region, candidate 5##AK027682|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK074702|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_177405|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF190746|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_017424|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK314321|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK295174|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK292689|CECR1|51816|cat eye syndrome chromosome region, candidate 1	0.998412	CTCF.p2:8:0.998
chr22	19705576	19705695	reg1013883.p2	8.780	+	TSC_hg19_v1_chr22_+_19701984 NM_002688 BC025261 U74628 U85431 Y11593 CR456545 CU013145 CU013433 AB463249 AK295940	-3593	+	AK092561 NM_001130861 NM_003277	-192776	-	TSC_hg19_v1_chr22_-_19512001 CR456420	-193605	-	TSC_hg19_v1_chr22_+_19705981 NM_001009939 AK056273	304	+	TSC_hg19_v1_chr22_+_19705998 U59632	385	+	L20860 TSC_hg19_v1_chr22_+_19710169	4508	+	NM_002688|SEPT5|5413|septin 5##BC025261|SEPT5|5413|septin 5##U74628|SEPT5|5413|septin 5##U85431|SEPT5|5413|septin 5##Y11593|SEPT5|5413|septin 5##CR456545|SEPT5|5413|septin 5##CU013145|SEPT5|5413|septin 5##CU013433|SEPT5|5413|septin 5##AK295940|SEPT5|5413|septin 5##AK092561|CLDN5|7122|claudin 5##NM_001130861|CLDN5|7122|claudin 5##NM_003277|CLDN5|7122|claudin 5##CR456420|CLDN5|7122|claudin 5##NM_001009939|SEPT5|5413|septin 5##AK056273|SEPT5|5413|septin 5##U59632|SEPT5-GP1BB|100526833|SEPT5-GP1BB readthrough##L20860|SEPT5-GP1BB|100526833|SEPT5-GP1BB readthrough	1.11497	CTCF.p2:17:0.985
chr10	20077170	20077254	reg1013128.p1	8.779	+	TSC_hg19_v1_chr10_+_18948359 NM_178815 BC024163 AK027275 AF494061 DQ893166 DQ896464	-1128791	+	BC033534 TSC_hg19_v1_chr10_-_18948215	-1129015	-	AK074323 BC035778 NM_182543	-1136680	-	TSC_hg19_v1_chr10_+_20105360 AK304591 AY358486 NM_032812	28161	+	NM_006393 Y16241	1109318	-	BC140744 BC144447 NM_001010896 NM_001177483	1358275	-	NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B##BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B##AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B##AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B##AK074323|NSUN6|221078|NOP2/Sun domain family, member 6##BC035778|NSUN6|221078|NOP2/Sun domain family, member 6##NM_182543|NSUN6|221078|NOP2/Sun domain family, member 6##AK304591|PLXDC2|84898|plexin domain containing 2##AY358486|PLXDC2|84898|plexin domain containing 2##NM_032812|PLXDC2|84898|plexin domain containing 2##NM_006393|NEBL|10529|nebulette##Y16241|NEBL|10529|nebulette##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113	0.600739	CTCF.p2:6:0.601
chr1	146644220	146644345	reg1015335.p2	8.779	+	AK316005 AK292820 AK304069 AK310982 BC053610 NM_005399 AK294863 AK316183	-190	-	AJ224538 HQ257946 TSC_hg19_v1_chr1_-_146643798	-517	-	BC136292 NM_183372 AL832622	-561584	-	AK295985 TSC_hg19_v1_chr1_+_146649617	5298	+	TSC_hg19_v1_chr1_-_146696932 BC035687 L37080 Z47553 BC020872 AK222728 AK225739	52663	-	AK314647 TSC_hg19_v1_chr1_-_146697221 AK022172 NM_001144829 NM_001144830 NM_001461	52910	-	AK316005|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK292820|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK304069|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK310982|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##BC053610|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##NM_005399|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK294863|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316183|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AJ224538|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##HQ257946|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##BC035687|FMO5|2330|flavin containing monooxygenase 5##L37080|FMO5|2330|flavin containing monooxygenase 5##Z47553|FMO5|2330|flavin containing monooxygenase 5##BC020872|FMO5|2330|flavin containing monooxygenase 5##AK222728|FMO5|2330|flavin containing monooxygenase 5##AK225739|FMO5|2330|flavin containing monooxygenase 5##AK314647|FMO5|2330|flavin containing monooxygenase 5##AK022172|FMO5|2330|flavin containing monooxygenase 5##NM_001144829|FMO5|2330|flavin containing monooxygenase 5##NM_001144830|FMO5|2330|flavin containing monooxygenase 5##NM_001461|FMO5|2330|flavin containing monooxygenase 5	0.983271	CTCF.p2:-3:0.983
chr18	61106623	61106729	reg1013290.p1	8.779	+	AK290932 AK309322 AK311041 TSC_hg19_v1_chr18_-_61089700 BC009692 AK308892 NM_004869	-16953	-	TSC_hg19_v1_chr18_-_61089681 BC039574 AF038960 AF195514	-17005	-	TSC_hg19_v1_chr18_-_61089648 AK291253	-17029	-	NM_002639 AK312765 BC020713 AK301667 U04313	37504	+	AF411191 BC103884 BC103885 NM_080474	116716	+	NM_012397 AK290323 AK313486 AK296797 AK303867 AK303979 AJ001696 AJ001697 AK298049 BC101821 BC143402 AJ001698	147921	+	AK290932|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK309322|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK311041|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##BC009692|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK308892|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##NM_004869|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##BC039574|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AF038960|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AF195514|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK291253|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##NM_002639|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##AK312765|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##BC020713|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##AK301667|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##U04313|SERPINB5|5268|serpin peptidase inhibitor, clade B (ovalbumin), member 5##AF411191|SERPINB12|89777|serpin peptidase inhibitor, clade B (ovalbumin), member 12##BC103884|SERPINB12|89777|serpin peptidase inhibitor, clade B (ovalbumin), member 12##BC103885|SERPINB12|89777|serpin peptidase inhibitor, clade B (ovalbumin), member 12##NM_080474|SERPINB12|89777|serpin peptidase inhibitor, clade B (ovalbumin), member 12##NM_012397|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK290323|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK313486|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK296797|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK303867|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK303979|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AJ001696|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AJ001697|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK298049|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##BC101821|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##BC143402|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AJ001698|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13	0.993109	CTCF.p2:-10:0.993
chr2	166731095	166731206	reg1013507.p2	8.779	+	TSC_hg19_v1_chr2_-_166650773 NM_004482	-80364	-	BC056246 TSC_hg19_v1_chr2_-_166650713	-80423	-	AK313389 TSC_hg19_v1_chr2_-_166650651	-80545	-	AB073395 TSC_hg19_v1_chr2_-_166810287 AK057268 AK292942 BC055424 NM_024753	79151	-	AB093548 AB093549 AB098335 AY043484 AF225985 NM_001165963 NM_001165964 NM_006920 EU368119	199004	-	EU368117 NM_001202435 DQ993522	274563	-	NM_004482|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##BC056246|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##AK313389|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##AB073395|TTC21B|79809|tetratricopeptide repeat domain 21B##AK057268|TTC21B|79809|tetratricopeptide repeat domain 21B##AK292942|TTC21B|79809|tetratricopeptide repeat domain 21B##BC055424|TTC21B|79809|tetratricopeptide repeat domain 21B##NM_024753|TTC21B|79809|tetratricopeptide repeat domain 21B##AB093548|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB093549|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB098335|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AY043484|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AF225985|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001165963|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001165964|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_006920|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##EU368119|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##EU368117|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001202435|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	0.657809	CTCF.p2:-11:0.658
chr2	72025578	72025684	reg1014834.p1	8.779	+	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-331738	+	NM_001130976 NM_001130977 NM_001130978 NM_001130979 NM_001130980 NM_001130981 NM_003494 AF075575 BC171803 EU515155 EU515156 EU515157 EU515158 EU515159 EU515160	-344830	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	-466734	+	AK295683 TSC_hg19_v1_chr2_-_72371202	345568	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	349311	-	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	1027473	-	DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130976|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130977|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130978|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130979|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130980|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130981|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_003494|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AF075575|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##BC171803|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515155|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515156|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515157|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515158|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515159|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515160|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B	0.788556	CTCF.p2:18:0.217	CTCF.p2:72:0.571
chr4	147259807	147259941	reg1015431.p1	8.779	+	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	-163007	+	BC033879 TSC_hg19_v1_chr4_-_146859976	-399906	-	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	-400197	-	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	183122	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	300217	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	607124	-	NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29	0.0	
chr5	119079793	119079917	reg1017106.p1	8.779	+	AF427126 AY692447 NM_001163991 NM_182761 BC040622 BC128242 BC128243	-114539	+	TSC_hg19_v1_chr5_+_118788215 NM_000414 NM_001199292 AK301212 AK312449 NM_001199291 BC003098 AK293254 AB208932 X87176 AK299685 AK298075 CU678374 DQ891866 DQ895055	-291659	+	TSC_hg19_v1_chr5_+_118691713 AF099935 AK001850 AF099936 CU675493	-388117	+	BC011941 TSC_hg19_v1_chr5_-_119740564	660695	-	TSC_hg19_v1_chr5_+_119799994 BC092474	720093	+	TSC_hg19_v1_chr5_+_119800010 AF242769 NM_016644	720156	+	AF427126|FAM170A|340069|family with sequence similarity 170, member A##AY692447|FAM170A|340069|family with sequence similarity 170, member A##NM_001163991|FAM170A|340069|family with sequence similarity 170, member A##NM_182761|FAM170A|340069|family with sequence similarity 170, member A##BC040622|FAM170A|340069|family with sequence similarity 170, member A##BC128242|FAM170A|340069|family with sequence similarity 170, member A##BC128243|FAM170A|340069|family with sequence similarity 170, member A##NM_000414|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199292|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK301212|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK312449|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199291|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC003098|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK293254|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##X87176|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK299685|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK298075|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ891866|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ895055|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AF099935|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001850|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099936|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC092474|PRR16|51334|proline rich 16##AF242769|PRR16|51334|proline rich 16##NM_016644|PRR16|51334|proline rich 16	0.220129	CTCF.p2:11:0.220
chr11	126732929	126733035	reg1013744.p2	8.778	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	-456984	+	NM_006278 X74570	-506887	+	TSC_hg19_v1_chr11_-_126225452 AK096370	-507519	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	137678	-	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	137743	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	140323	+	AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK096370|FLJ39051|399972|uncharacterized LOC399972##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)	0.039968	
chr12	2400484	2400617	reg1016136.p1	8.778	+	AB209016 AJ224873 AY830711 AY830712 AY830713 Z34809 Z34810 Z34811 Z34812 Z34813 Z34814 Z34815 Z34816 Z34817 Z34818 Z34819 Z34820 Z34821 Z34822 Z74996 TSC_hg19_v1_chr12_+_2162753	-237822	+	TSC_hg19_v1_chr12_+_2162452 NM_000719 NM_001129827 NM_001129829 NM_001129830 NM_001129831 NM_001129832 NM_001129833 NM_001129834 NM_001129835 NM_001129836 NM_001129837 NM_001129838 NM_001129839 NM_001129840 NM_001129841 NM_001129842 NM_001129843 NM_001129844 NM_001129846 NM_001167623 NM_001167624 NM_001167625 NM_199460 AK309111 AF465484 AK308652 BC146846	-238056	+	TSC_hg19_v1_chr12_-_2113622 AB463561 AK301109 AK056200 AK299203 BC043437 AY146652 NM_152640	-286879	-	TSC_hg19_v1_chr12_+_2904161 NM_002014 AK313918 BC001786 M88279 BC007924	503604	+	TSC_hg19_v1_chr12_+_2904310 AB385011 CU674888 DQ893668 DQ895800	503752	+	NM_018463 TSC_hg19_v1_chr12_+_2921842 AK130319 AK297189 AK291110 AK300905 AK027483 BC006552 BC013399 DQ892711 DQ895963 CU675449 AY599883	521306	+	AB209016|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AJ224873|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830711|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830712|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830713|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34809|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34810|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34811|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34812|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34813|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34814|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34815|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34816|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34817|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34818|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34819|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34820|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34821|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34822|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z74996|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK301109|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK056200|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK299203|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC043437|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AY146652|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_152640|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_002014|FKBP4|2288|FK506 binding protein 4, 59kDa##AK313918|FKBP4|2288|FK506 binding protein 4, 59kDa##BC001786|FKBP4|2288|FK506 binding protein 4, 59kDa##M88279|FKBP4|2288|FK506 binding protein 4, 59kDa##BC007924|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ893668|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ895800|FKBP4|2288|FK506 binding protein 4, 59kDa##NM_018463|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK130319|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK297189|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK291110|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK300905|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK027483|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC006552|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC013399|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ892711|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ895963|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AY599883|ITFG2|55846|integrin alpha FG-GAP repeat containing 2	0.896149	CTCF.p2:0:0.896
chr12	93179013	93179133	reg1014711.p1	8.778	+	NM_001004330 AK128530	-48786	+	NM_001037671 NM_001178097	-82455	+	AJ845168 NM_001025232	-357150	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	143865	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	143970	-	TSC_hg19_v1_chr12_-_93323097 NM_003566	144025	-	NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##NM_003566|EEA1|8411|early endosome antigen 1	0.642424	CTCF.p2:-16:0.642
chr11	124961201	124961331	reg1015991.p1	8.777	+	TSC_hg19_v1_chr11_+_124933200 AK290314 AK074100 BC051314 CU690800	-28036	+	TSC_hg19_v1_chr11_+_124933012 AK074207 NM_001145290 NM_198277	-28247	+	TSC_hg19_v1_chr11_+_124824093 BC018540	-137160	+	NM_001080546	11938	-	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	20203	-	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	73312	+	AK290314|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##AK074100|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##BC051314|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##AK074207|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##NM_001145290|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##NM_198277|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##BC018540|CCDC15|80071|coiled-coil domain containing 15##NM_001080546|TMEM218|219854|transmembrane protein 218##BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2	0.786441	CTCF.p2:-10:0.786
chr2	231917699	231917839	reg1016301.p1	8.776	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	-15532	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	-56877	+	BC032694 NM_005683	-127829	-	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	3808	+	TSC_hg19_v1_chr2_+_231921606 BC064398	3832	+	BC014013 TSC_hg19_v1_chr2_+_231921608 BC005036 BC032445 BC112344 BC114434 AK312528 BC001053 AK307513	3847	+	NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC064398|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC014013|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC032445|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC112344|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC114434|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK312528|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC001053|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307513|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.55351	CTCF.p2:3:0.534
chr5	155370962	155371086	reg1017286.p1	8.776	+	NM_001099293 AK302388	-977738	+	TSC_hg19_v1_chr5_+_154320654 NM_001014990 NM_014180 AK000601 AK302784 CR933679 BC012565 AF161507 CU680362	-1050375	+	TSC_hg19_v1_chr5_-_154317760 AB385260 AY063750 AK022748 BC113614 BC143724 BC036894 BC040931 AK074066 AK315101 NM_001252156 NM_015465	-1053308	-	BX537948 NM_000337 NM_001128209 NM_172244	382736	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	383149	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	1019211	-	NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##NM_001014990|MRPL22|29093|mitochondrial ribosomal protein L22##NM_014180|MRPL22|29093|mitochondrial ribosomal protein L22##AK000601|MRPL22|29093|mitochondrial ribosomal protein L22##AK302784|MRPL22|29093|mitochondrial ribosomal protein L22##CR933679|MRPL22|29093|mitochondrial ribosomal protein L22##BC012565|MRPL22|29093|mitochondrial ribosomal protein L22##AF161507|MRPL22|29093|mitochondrial ribosomal protein L22##AY063750|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK022748|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC113614|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC143724|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC036894|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC040931|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK074066|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK315101|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_001252156|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_015465|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4	0.994932	CTCF.p2:-7:0.995
chr6	161154229	161154351	reg1014321.p1	8.776	+	NM_000301 NM_001168338 AK308036 AK312966 AK298338 X05199 M74220 BC060513	-31029	+	NM_005577	-66884	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	-384896	+	TSC_hg19_v1_chr6_+_161412797 BC146770 D86968	258452	+	TSC_hg19_v1_chr6_+_161412815 AF002715 NM_005922 NM_006724	258524	+	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	258568	+	NM_000301|PLG|5340|plasminogen##NM_001168338|PLG|5340|plasminogen##AK308036|PLG|5340|plasminogen##AK312966|PLG|5340|plasminogen##AK298338|PLG|5340|plasminogen##X05199|PLG|5340|plasminogen##M74220|PLG|5340|plasminogen##BC060513|PLG|5340|plasminogen##NM_005577|LPA|4018|lipoprotein, Lp(a)##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##BC146770|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##D86968|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AF002715|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_005922|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_006724|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4	0.010418	
chr8	139178062	139178181	reg1013819.p1	8.776	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-2707920	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-2708463	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-3452847	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	330985	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	748123	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	1537161	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.241727	CTCF.p2:-14:0.242
chr1	153919187	153919286	reg1014356.p1	8.775	+	TSC_hg19_v1_chr1_-_153919148 AB007945 NM_014856	-90	-	AK094665 NM_020699 TSC_hg19_v1_chr1_-_153895452	-23785	-	BC003041 BC009916 NM_024330 AK075377 TSC_hg19_v1_chr1_+_153747897 AK123997 AY358409 AK074134 DQ893429 DQ895951 AK027499 BC029792	-171370	+	AY726597 AK096382 BC053562 TSC_hg19_v1_chr1_-_153931074 AF289574	11757	-	TSC_hg19_v1_chr1_-_153931089 AK223559	11848	-	TSC_hg19_v1_chr1_-_153931120 AY360172 NM_181715	11881	-	AB007945|DENND4B|9909|DENN/MADD domain containing 4B##NM_014856|DENND4B|9909|DENN/MADD domain containing 4B##AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B##NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B##BC003041|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC009916|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##NM_024330|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK075377|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK123997|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AY358409|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK074134|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ893429|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ895951|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK027499|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC029792|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AY726597|CRTC2|200186|CREB regulated transcription coactivator 2##AK096382|CRTC2|200186|CREB regulated transcription coactivator 2##BC053562|CRTC2|200186|CREB regulated transcription coactivator 2##AF289574|CRTC2|200186|CREB regulated transcription coactivator 2##AK223559|CRTC2|200186|CREB regulated transcription coactivator 2##AY360172|CRTC2|200186|CREB regulated transcription coactivator 2##NM_181715|CRTC2|200186|CREB regulated transcription coactivator 2	0.302965	CTCF.p2:-9:0.303
chr9	118925912	118926043	reg1014465.p1	8.774	+	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	-9907	+	AB022761 NM_017418	-1021881	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-1045504	-	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	523485	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	523629	+	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	1251336	-	NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2	0.734633	CTCF.p2:-19:0.735
chr1	219394477	219394619	reg1015733.p1	8.773	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-47306	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-47390	+	M19154 TSC_hg19_v1_chr1_+_218519634	-874943	+	BC036078 TSC_hg19_v1_chr1_-_220101540	706981	-	AB464233 TSC_hg19_v1_chr1_-_220101784	707243	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	707417	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.060023	
chr12	23208103	23208202	reg1015209.p2	8.773	+	TSC_hg19_v1_chr12_+_22778130 CU688188 BC006111 AL137750 AK074425	-430005	+	AF207600 TSC_hg19_v1_chr12_+_22778077 BC066907 NM_001039481 NM_018638	-430109	+	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	-510686	-	NM_178010 AK098610 AK223536	529374	-	AK074317 TSC_hg19_v1_chr12_-_24102605 BC065532 AB081589 NM_006940	894450	-	TSC_hg19_v1_chr12_-_24103855 AK299607 AK096569	895702	-	BC006111|ETNK1|55500|ethanolamine kinase 1##AL137750|ETNK1|55500|ethanolamine kinase 1##AK074425|ETNK1|55500|ethanolamine kinase 1##AF207600|ETNK1|55500|ethanolamine kinase 1##BC066907|ETNK1|55500|ethanolamine kinase 1##NM_001039481|ETNK1|55500|ethanolamine kinase 1##NM_018638|ETNK1|55500|ethanolamine kinase 1##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528##NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5##AK098610|SOX5|6660|SRY (sex determining region Y)-box 5##AK223536|SOX5|6660|SRY (sex determining region Y)-box 5##AK074317|SOX5|6660|SRY (sex determining region Y)-box 5##BC065532|SOX5|6660|SRY (sex determining region Y)-box 5##AB081589|SOX5|6660|SRY (sex determining region Y)-box 5##NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5##AK299607|SOX5|6660|SRY (sex determining region Y)-box 5##AK096569|SOX5|6660|SRY (sex determining region Y)-box 5	0.948556	CTCF.p2:-1:0.949
chr9	100663415	100663529	reg1013892.p2	8.773	+	AB464529 TSC_hg19_v1_chr9_+_100616210	-47270	+	TSC_hg19_v1_chr9_+_100615409 NM_004473	-48001	+	TSC_hg19_v1_chr9_-_100459623 BC014965 NM_000380	-203806	-	TSC_hg19_v1_chr9_-_100684783 CU678254 DQ892983 DQ896231 AY189280 AF151053 AK309270 BC002863 AK000213 AK302701 NM_016481	21338	-	AF306683 AF306682 AL833094 AY255672 NM_197978 AY244805	37049	-	AF228713 AF322875 BC048324 AK292441 NM_018437	43645	-	NM_004473|FOXE1|2304|forkhead box E1 (thyroid transcription factor 2)##BC014965|XPA|7507|xeroderma pigmentosum, complementation group A##NM_000380|XPA|7507|xeroderma pigmentosum, complementation group A##DQ892983|C9orf156|51531|chromosome 9 open reading frame 156##DQ896231|C9orf156|51531|chromosome 9 open reading frame 156##AY189280|C9orf156|51531|chromosome 9 open reading frame 156##AF151053|C9orf156|51531|chromosome 9 open reading frame 156##AK309270|C9orf156|51531|chromosome 9 open reading frame 156##BC002863|C9orf156|51531|chromosome 9 open reading frame 156##AK000213|C9orf156|51531|chromosome 9 open reading frame 156##AK302701|C9orf156|51531|chromosome 9 open reading frame 156##NM_016481|C9orf156|51531|chromosome 9 open reading frame 156##AF306683|HEMGN|55363|hemogen##AF306682|HEMGN|55363|hemogen##AL833094|HEMGN|55363|hemogen##AY255672|HEMGN|55363|hemogen##NM_197978|HEMGN|55363|hemogen##AY244805|HEMGN|55363|hemogen##AF228713|HEMGN|55363|hemogen##AF322875|HEMGN|55363|hemogen##BC048324|HEMGN|55363|hemogen##AK292441|HEMGN|55363|hemogen##NM_018437|HEMGN|55363|hemogen	0.71608	CTCF.p2:0:0.716
chr1	174063060	174063175	reg1015055.p1	8.772	+	TSC_hg19_v1_chr1_-_173991524 AB007961	-71602	-	AB095945 BC136784 BC144408 AK122948 NM_172071	-100988	-	AK093501 AX748170 TSC_hg19_v1_chr1_-_173933260	-129899	-	BC041888 NM_014857 TSC_hg19_v1_chr1_+_174128608	65483	+	AK095838 TSC_hg19_v1_chr1_+_174128676 AL157958	65575	+	BC095532 NM_005684 CU688296 CU688298 BC067456 BC067457 BC067458 BC067459 BC067460 BC069460 HQ995526	354113	+	AB095945|RC3H1|149041|ring finger and CCCH-type domains 1##BC136784|RC3H1|149041|ring finger and CCCH-type domains 1##BC144408|RC3H1|149041|ring finger and CCCH-type domains 1##AK122948|RC3H1|149041|ring finger and CCCH-type domains 1##NM_172071|RC3H1|149041|ring finger and CCCH-type domains 1##AK093501|RC3H1|149041|ring finger and CCCH-type domains 1##BC041888|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_014857|RABGAP1L|9910|RAB GTPase activating protein 1-like##AK095838|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL157958|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC095532|GPR52|9293|G protein-coupled receptor 52##NM_005684|GPR52|9293|G protein-coupled receptor 52##BC067456|GPR52|9293|G protein-coupled receptor 52##BC067457|GPR52|9293|G protein-coupled receptor 52##BC067458|GPR52|9293|G protein-coupled receptor 52##BC067459|GPR52|9293|G protein-coupled receptor 52##BC067460|GPR52|9293|G protein-coupled receptor 52##BC069460|GPR52|9293|G protein-coupled receptor 52##HQ995526|GPR52|9293|G protein-coupled receptor 52	0.0	
chr11	82429403	82429530	reg1015314.p1	8.772	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-3277742	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-4143571	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-4143674	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	15432	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	182051	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	183308	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.507697	CTCF.p2:-17:0.508
chr1	217507398	217507534	reg1016868.p1	8.772	+	CR749497 BX647076 NM_001134285	-196371	-	NM_001243505	-244271	-	AF058291 AK298851 AK291028 BX649009 NM_001243506 NM_206594 NM_206595	-244500	-	AB527654 CU687736 BC042193 TSC_hg19_v1_chr1_-_217804402 BC063474 AK001114 AK291238 NM_018040 BC027719	296916	-	AY963797 AK310291 AK098591 BC014608 NM_138796 TSC_hg19_v1_chr1_+_217804714 EU832110 EU832204	297227	+	NM_016052 TSC_hg19_v1_chr1_+_218458635	951166	+	CR749497|ESRRG|2104|estrogen-related receptor gamma##BX647076|ESRRG|2104|estrogen-related receptor gamma##NM_001134285|ESRRG|2104|estrogen-related receptor gamma##NM_001243505|ESRRG|2104|estrogen-related receptor gamma##AF058291|ESRRG|2104|estrogen-related receptor gamma##AK298851|ESRRG|2104|estrogen-related receptor gamma##AK291028|ESRRG|2104|estrogen-related receptor gamma##BX649009|ESRRG|2104|estrogen-related receptor gamma##NM_001243506|ESRRG|2104|estrogen-related receptor gamma##NM_206594|ESRRG|2104|estrogen-related receptor gamma##NM_206595|ESRRG|2104|estrogen-related receptor gamma##BC042193|GPATCH2|55105|G patch domain containing 2##BC063474|GPATCH2|55105|G patch domain containing 2##AK001114|GPATCH2|55105|G patch domain containing 2##AK291238|GPATCH2|55105|G patch domain containing 2##NM_018040|GPATCH2|55105|G patch domain containing 2##BC027719|GPATCH2|55105|G patch domain containing 2##AY963797|SPATA17|128153|spermatogenesis associated 17##AK310291|SPATA17|128153|spermatogenesis associated 17##AK098591|SPATA17|128153|spermatogenesis associated 17##BC014608|SPATA17|128153|spermatogenesis associated 17##NM_138796|SPATA17|128153|spermatogenesis associated 17##EU832110|SPATA17|128153|spermatogenesis associated 17##EU832204|SPATA17|128153|spermatogenesis associated 17##NM_016052|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)	0.055106	
chr5	179061449	179061602	reg1015230.p1	8.772	+	TSC_hg19_v1_chr5_-_179051599 AK124530	-9898	-	TSC_hg19_v1_chr5_-_179050676 NM_005520	-10824	-	TSC_hg19_v1_chr5_-_179050672 BC001348 AK092273 AK307693 L22009	-10871	-	BC043435 BC040992 BC130442 BC130444 BC144274 BC144275 NM_001142306	10500	-	NM_001164444	46449	-	TSC_hg19_v1_chr5_+_179125381 AK294702	63909	+	AK124530|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)##NM_005520|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)##BC001348|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)##AK092273|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)##AK307693|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)##L22009|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)##BC043435|C5orf60|285679|chromosome 5 open reading frame 60##BC040992|C5orf60|285679|chromosome 5 open reading frame 60##BC130442|C5orf60|285679|chromosome 5 open reading frame 60##BC130444|C5orf60|285679|chromosome 5 open reading frame 60##BC144274|C5orf60|285679|chromosome 5 open reading frame 60##BC144275|C5orf60|285679|chromosome 5 open reading frame 60##NM_001142306|C5orf60|285679|chromosome 5 open reading frame 60##NM_001164444|CBY3|646019|chibby homolog 3 (Drosophila)##AK294702|CANX|821|calnexin	0.976865	CTCF.p2:11:0.977
chr7	28962399	28962516	reg1012149.p3	8.772	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	-236774	+	AK292916 TSC_hg19_v1_chr7_+_28530784	-431692	+	L05911 NM_004904	-487224	+	CU690330 TSC_hg19_v1_chr7_-_28997732	35240	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	35472	-	AK293803 NM_014817 TSC_hg19_v1_chr7_-_28998036	35575	-	L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5##AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats##NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats	0.216107	CTCF.p2:-26:0.216
chr1	437626	437786	reg1003756.p1	8.771	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-70058	+	NM_001005484	-368616	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-408301	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	184336	-	TSC_hg19_v1_chr1_-_714015 BC006361	276311	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	325189	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	2.928377	CTCF.p2:17:0.977	CTCF.p2:-50:0.974	CTCF.p2:85:0.977
chr12	118287866	118288046	reg1015270.p2	8.770	+	AK294435 AF446135 EU753241 U17327 AK307481 NM_000620 NM_001204218	-488448	-	AF446136 TSC_hg19_v1_chr12_-_117799037	-488935	-	NM_001204214	-540742	-	NM_173598	118071	-	NM_001130112 NM_001206801 NM_007370 NM_181578 TSC_hg19_v1_chr12_+_118454507 AK291107 AK094575 AK290685 BC001866 BC013961 AB208992 BC020440 L07540 AB464140 CU674898 CR407651	166612	+	AK310892 TSC_hg19_v1_chr12_-_118498977 BC015887 AK298513 AF229181 NM_018639	210979	-	AK294435|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446135|NOS1|4842|nitric oxide synthase 1 (neuronal)##EU753241|NOS1|4842|nitric oxide synthase 1 (neuronal)##U17327|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK307481|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_000620|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204218|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446136|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_173598|KSR2|283455|kinase suppressor of ras 2##NM_001130112|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_001206801|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_007370|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_181578|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK291107|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK094575|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK290685|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC001866|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC013961|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AB208992|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC020440|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##L07540|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##CR407651|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK310892|WSB2|55884|WD repeat and SOCS box containing 2##BC015887|WSB2|55884|WD repeat and SOCS box containing 2##AK298513|WSB2|55884|WD repeat and SOCS box containing 2##AF229181|WSB2|55884|WD repeat and SOCS box containing 2##NM_018639|WSB2|55884|WD repeat and SOCS box containing 2	0.998655	CTCF.p2:12:0.999
chr16	4359857	4359967	reg1013411.p2	8.770	+	TSC_hg19_v1_chr16_-_4323057 AK309301	-36847	-	NM_003223 S73885 TSC_hg19_v1_chr16_-_4323025	-36900	-	X57435 DQ893617 DQ895293 CR541726 CU679751 AB464303 TSC_hg19_v1_chr16_-_4322885 BC010576	-37084	-	AF325914 NM_032575 AB463687	22339	+	AK095566 TSC_hg19_v1_chr16_+_4385160	25239	+	TSC_hg19_v1_chr16_-_4401268 AF151894 AF349455 BC005024 AK026514 NM_016069	41406	-	AK309301|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##X57435|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ893617|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ895293|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##CR541726|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##BC010576|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##AF325914|GLIS2|84662|GLIS family zinc finger 2##NM_032575|GLIS2|84662|GLIS family zinc finger 2##AK095566|GLIS2|84662|GLIS family zinc finger 2##AF151894|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AF349455|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##BC005024|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AK026514|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##NM_016069|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)	0.145655	
chr11	43966436	43966559	reg1017259.p1	8.769	+	TSC_hg19_v1_chr11_+_43964186 NM_001145033 BC052560	-2488	+	TSC_hg19_v1_chr11_+_43902380 NM_139178 AK315266 AB042029 BC067257	-64104	+	NM_016142 TSC_hg19_v1_chr11_+_43702287 AK027882 AK075011 AK292625 AK075216 AK074952 AF078850 BC012043 AK222881 AK301663 BC012536 EU176708	-264239	+	AB231734 NM_001031854 BC144554	103050	+	NM_001127219 NM_032592 AK057649 BC020197 AY026508 AK304074 TSC_hg19_v1_chr11_+_44088043 AK307380	121409	+	NM_001178083 NM_207122 U62740 TSC_hg19_v1_chr11_+_44117224 AK312375 BC010058 AK296713	150677	+	NM_001145033|C11orf96|387763|chromosome 11 open reading frame 96##BC052560|C11orf96|387763|chromosome 11 open reading frame 96##NM_139178|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AK315266|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AB042029|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##BC067257|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##NM_016142|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK027882|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075011|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK292625|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075216|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK074952|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AF078850|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012043|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK222881|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK301663|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012536|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##EU176708|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##NM_001127219|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##NM_032592|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK057649|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##BC020197|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AY026508|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK304074|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK307380|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##NM_001178083|EXT2|2132|exostosin 2##NM_207122|EXT2|2132|exostosin 2##U62740|EXT2|2132|exostosin 2##AK312375|EXT2|2132|exostosin 2##BC010058|EXT2|2132|exostosin 2##AK296713|EXT2|2132|exostosin 2	0.999094	CTCF.p2:-5:0.999
chr4	72806866	72807006	reg1013406.p1	8.769	+	AK223458 NM_001204306	-135700	-	AK309595 NM_001204307	-137179	-	AB591002 CU691194 M12654 TSC_hg19_v1_chr4_-_72649797 AK290827 AK298433 AK312971 BC057228 BC022310 X03178 AK315853 NM_000583	-157030	-	AF119815 NM_004885 AK308069 AJ311393	90633	+	AK290937 NM_001144756 NM_053036 AF236083	97934	+	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	627555	-	AK223458|GC|2638|group-specific component (vitamin D binding protein)##NM_001204306|GC|2638|group-specific component (vitamin D binding protein)##AK309595|GC|2638|group-specific component (vitamin D binding protein)##NM_001204307|GC|2638|group-specific component (vitamin D binding protein)##AK290827|GC|2638|group-specific component (vitamin D binding protein)##AK298433|GC|2638|group-specific component (vitamin D binding protein)##AK312971|GC|2638|group-specific component (vitamin D binding protein)##BC057228|GC|2638|group-specific component (vitamin D binding protein)##BC022310|GC|2638|group-specific component (vitamin D binding protein)##X03178|GC|2638|group-specific component (vitamin D binding protein)##AK315853|GC|2638|group-specific component (vitamin D binding protein)##NM_000583|GC|2638|group-specific component (vitamin D binding protein)##AF119815|NPFFR2|10886|neuropeptide FF receptor 2##NM_004885|NPFFR2|10886|neuropeptide FF receptor 2##AK308069|NPFFR2|10886|neuropeptide FF receptor 2##AJ311393|NPFFR2|10886|neuropeptide FF receptor 2##AK290937|NPFFR2|10886|neuropeptide FF receptor 2##NM_001144756|NPFFR2|10886|neuropeptide FF receptor 2##NM_053036|NPFFR2|10886|neuropeptide FF receptor 2##AF236083|NPFFR2|10886|neuropeptide FF receptor 2##AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3	0.971332	CTCF.p2:-6:0.971
chr5	41696219	41696357	reg1013958.p2	8.769	+	AB464014 TSC_hg19_v1_chr5_-_41510701 AK127142 BX648329 NM_001005473	-185610	-	BC035723 NM_001115131	-434749	-	J05024 J04506 AK292509 TSC_hg19_v1_chr5_-_41213635 J05064 AK313673 NM_000065	-482699	-	AB528366 CR457049 CU679223 DQ891805 DQ894989 TSC_hg19_v1_chr5_-_41870488 AK312327	174186	-	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	174295	-	TSC_hg19_v1_chr5_-_41870706 NM_000436	174458	-	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BC035723|C6|729|complement component 6##NM_001115131|C6|729|complement component 6##J05024|C6|729|complement component 6##J04506|C6|729|complement component 6##AK292509|C6|729|complement component 6##J05064|C6|729|complement component 6##AK313673|C6|729|complement component 6##NM_000065|C6|729|complement component 6##CR457049|OXCT1|5019|3-oxoacid CoA transferase 1##DQ891805|OXCT1|5019|3-oxoacid CoA transferase 1##DQ894989|OXCT1|5019|3-oxoacid CoA transferase 1##AK312327|OXCT1|5019|3-oxoacid CoA transferase 1##BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1	0.953708	CTCF.p2:-18:0.954
chr11	44948780	44948905	reg1016407.p1	8.768	+	NM_130783	-162867	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-361615	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-361677	+	TSC_hg19_v1_chr11_-_44956087 AF010315	7265	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	23575	-	AF275818 NM_020229	166721	+	NM_130783|TSPAN18|90139|tetraspanin 18##AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11	0.990282	CTCF.p2:-20:0.990
chr2	47499623	47499752	reg1014566.p1	8.768	+	TSC_hg19_v1_chr2_-_47403685 NM_001743	-95978	-	TSC_hg19_v1_chr2_-_47403656 BC008437	-96033	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	-96037	-	NM_002354 TSC_hg19_v1_chr2_+_47596376	96655	+	TSC_hg19_v1_chr2_+_47596449 AK026585 BC014785 M26481 M32325 X14758 M33011 M32306 DQ891338 DQ894520 CR542259 CR542283	96858	+	TSC_hg19_v1_chr2_+_47630218 AK304496	130517	+	NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC008437|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##NM_002354|EPCAM|4072|epithelial cell adhesion molecule##AK026585|EPCAM|4072|epithelial cell adhesion molecule##BC014785|EPCAM|4072|epithelial cell adhesion molecule##M26481|EPCAM|4072|epithelial cell adhesion molecule##M32325|EPCAM|4072|epithelial cell adhesion molecule##X14758|EPCAM|4072|epithelial cell adhesion molecule##M33011|EPCAM|4072|epithelial cell adhesion molecule##M32306|EPCAM|4072|epithelial cell adhesion molecule##DQ891338|EPCAM|4072|epithelial cell adhesion molecule##DQ894520|EPCAM|4072|epithelial cell adhesion molecule##CR542259|EPCAM|4072|epithelial cell adhesion molecule##CR542283|EPCAM|4072|epithelial cell adhesion molecule##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.789342	CTCF.p2:0:0.789
chr6	41060315	41060430	reg1014455.p2	8.768	+	TSC_hg19_v1_chr6_+_41040930 BC039244	-19447	+	TSC_hg19_v1_chr6_+_41040723 X59711	-19650	+	TSC_hg19_v1_chr6_+_41040712 NM_002505 NM_021705	-19673	+	AF508193 AF534822 AF534823 BC100944 BC100945 BC100946 NM_178174 AY358357	61677	-	DQ891310 DQ894494 BC032362 BC018284 TSC_hg19_v1_chr6_-_41130855	70466	-	TSC_hg19_v1_chr6_-_41130901 AK312215 AF213457	70516	-	BC039244|NFYA|4800|nuclear transcription factor Y, alpha##X59711|NFYA|4800|nuclear transcription factor Y, alpha##NM_002505|NFYA|4800|nuclear transcription factor Y, alpha##NM_021705|NFYA|4800|nuclear transcription factor Y, alpha##AF508193|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##AF534822|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##AF534823|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##BC100944|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##BC100945|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##BC100946|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##NM_178174|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##AY358357|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##DQ891310|TREM2|54209|triggering receptor expressed on myeloid cells 2##DQ894494|TREM2|54209|triggering receptor expressed on myeloid cells 2##BC032362|TREM2|54209|triggering receptor expressed on myeloid cells 2##BC018284|TREM2|54209|triggering receptor expressed on myeloid cells 2##AK312215|TREM2|54209|triggering receptor expressed on myeloid cells 2##AF213457|TREM2|54209|triggering receptor expressed on myeloid cells 2	0.956579	CTCF.p2:-6:0.957
chr8	11973194	11973336	reg1017982.p1	8.768	+	BC110823 NM_001039615	-26419	+	DQ012022 NM_001037804 NM_001195257	-44010	-	AY621331 DQ012024 NM_001033019 BC130461 BC130463	-119476	-	AY509884 NM_201402	23003	-	AK309984 BC062615 BC072459 BC098427 BC048297 AK098138 AK308513 AK297741 AK308439 BC085016 NM_001083537 AK291001 AK298940	78322	-	DQ012022 NM_001037804 NM_001195257	202559	-	BC110823|ZNF705D|728957|zinc finger protein 705D##NM_001039615|ZNF705D|728957|zinc finger protein 705D##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##AY621331|DEFB134|613211|defensin, beta 134##DQ012024|DEFB134|613211|defensin, beta 134##NM_001033019|DEFB134|613211|defensin, beta 134##BC130461|DEFB134|613211|defensin, beta 134##BC130463|DEFB134|613211|defensin, beta 134##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##NM_201402|USP17L2|377630|ubiquitin specific peptidase 17-like 2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##BC062615|FAM86B1|85002|family with sequence similarity 86, member B1##BC098427|FAM86B1|85002|family with sequence similarity 86, member B1##BC048297|FAM86B1|85002|family with sequence similarity 86, member B1##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##NM_001083537|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like	0.997388	CTCF.p2:-13:0.997
chr16	47178326	47178449	reg1013429.p2	8.767	+	TSC_hg19_v1_chr16_-_47177902 AK074937 NM_001201477 NM_018092	-465	-	AY358718 BC108727 TSC_hg19_v1_chr16_-_47177852 BC098380	-541	-	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	-170792	-	TSC_hg19_v1_chr16_-_47494975 BC006321 DQ893514 DQ896493 AF503339 AK027596	316478	-	TSC_hg19_v1_chr16_-_47494995 BC024162 NM_030790	316648	-	TSC_hg19_v1_chr16_-_47495158 AF212247 AK301908	316770	-	AK074937|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_001201477|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_018092|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##AY358718|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC108727|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC098380|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC006321|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ893514|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ896493|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF503339|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK027596|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##BC024162|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##NM_030790|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF212247|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK301908|ITFG1|81533|integrin alpha FG-GAP repeat containing 1	0.040963	
chr20	62701176	62701306	reg1016468.p1	8.767	+	TSC_hg19_v1_chr20_+_62694558 BC050623 BC014211 BC063636 BC018896 BC050624 BC056407 D50495 AB590039 CR456940 CU690746 EU446904	-6681	+	NM_003195	-7232	+	NM_198723	-12803	+	BC054337 TSC_hg19_v1_chr20_-_62710872 BC063010 NM_005873 AK298240 AK290081 X91809 BC022197	9609	-	AF285097 BC001318 TSC_hg19_v1_chr20_-_62711288 NM_001039467 AF285096	10014	-	AF285093 AK308203 NM_000913 NM_182647 L40949 AF285095	10238	+	BC050623|TCEA2|6919|transcription elongation factor A (SII), 2##BC014211|TCEA2|6919|transcription elongation factor A (SII), 2##BC018896|TCEA2|6919|transcription elongation factor A (SII), 2##BC050624|TCEA2|6919|transcription elongation factor A (SII), 2##BC056407|TCEA2|6919|transcription elongation factor A (SII), 2##D50495|TCEA2|6919|transcription elongation factor A (SII), 2##CR456940|TCEA2|6919|transcription elongation factor A (SII), 2##EU446904|TCEA2|6919|transcription elongation factor A (SII), 2##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2##NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##BC054337|RGS19|10287|regulator of G-protein signaling 19##BC063010|RGS19|10287|regulator of G-protein signaling 19##NM_005873|RGS19|10287|regulator of G-protein signaling 19##AK298240|RGS19|10287|regulator of G-protein signaling 19##AK290081|RGS19|10287|regulator of G-protein signaling 19##X91809|RGS19|10287|regulator of G-protein signaling 19##AF285097|RGS19|10287|regulator of G-protein signaling 19##BC001318|RGS19|10287|regulator of G-protein signaling 19##NM_001039467|RGS19|10287|regulator of G-protein signaling 19##AF285096|RGS19|10287|regulator of G-protein signaling 19##AF285093|OPRL1|4987|opiate receptor-like 1##AK308203|OPRL1|4987|opiate receptor-like 1##NM_000913|OPRL1|4987|opiate receptor-like 1##NM_182647|OPRL1|4987|opiate receptor-like 1##L40949|OPRL1|4987|opiate receptor-like 1##AF285095|OPRL1|4987|opiate receptor-like 1	0.999864	CTCF.p2:5:1.000
chr2	86116244	86116374	reg1012699.p1	8.767	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-223	-	AY152815 NM_001042437	-21517	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-135304	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	216674	-	NM_015425	216968	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	217032	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.908299	CTCF.p2:-19:0.908
chr8	38042050	38042152	reg1012611.p1	8.767	+	TSC_hg19_v1_chr8_+_38034377 AF111116	-7713	+	TSC_hg19_v1_chr8_+_38034355 BC038505 AK304072 AK314020 AF095194	-7776	+	TSC_hg19_v1_chr8_-_38034212 NM_014462	-7872	-	NM_001164234 NM_015214 TSC_hg19_v1_chr8_+_38089102 AK056525	46982	+	TSC_hg19_v1_chr8_+_38089233 AK125904 NM_001164232	47216	+	BC033025 AK292118 TSC_hg19_v1_chr8_-_38126733 AF212238 BC106014 NM_001102559 NM_001102560 NM_032483	84615	-	AF111116|BAG4|9530|BCL2-associated athanogene 4##BC038505|BAG4|9530|BCL2-associated athanogene 4##AK304072|BAG4|9530|BCL2-associated athanogene 4##AK314020|BAG4|9530|BCL2-associated athanogene 4##AF095194|BAG4|9530|BCL2-associated athanogene 4##NM_014462|LSM1|27257|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001164234|DDHD2|23259|DDHD domain containing 2##NM_015214|DDHD2|23259|DDHD domain containing 2##AK056525|DDHD2|23259|DDHD domain containing 2##AK125904|DDHD2|23259|DDHD domain containing 2##NM_001164232|DDHD2|23259|DDHD domain containing 2##BC033025|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##AK292118|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##AF212238|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##BC106014|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##NM_001102559|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##NM_001102560|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##NM_032483|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	0.960495	CTCF.p2:-38:0.960
chr10	96080165	96080275	reg1014062.p1	8.766	+	AK297779 AK289852 NM_001165979 AF170071	-231389	+	TSC_hg19_v1_chr10_+_95753696 AB040949 BC151854 NM_016341	-326506	+	TSC_hg19_v1_chr10_+_95653753 AK091309 AX746907 NM_001134658 NM_153226 BC036382 BC058549 BC143283 BC143284 BC104814 BC047102	-426480	+	AB077992 TSC_hg19_v1_chr10_-_96122697 BC049850 NM_022451 AK091246 AX746873 BC030999 AK292520	42456	-	NM_015188 TSC_hg19_v1_chr10_+_96162185	81966	+	TSC_hg19_v1_chr10_+_96162276 AB011180 AB449898	82101	+	AK297779|PLCE1|51196|phospholipase C, epsilon 1##AK289852|PLCE1|51196|phospholipase C, epsilon 1##NM_001165979|PLCE1|51196|phospholipase C, epsilon 1##AF170071|PLCE1|51196|phospholipase C, epsilon 1##AB040949|PLCE1|51196|phospholipase C, epsilon 1##BC151854|PLCE1|51196|phospholipase C, epsilon 1##NM_016341|PLCE1|51196|phospholipase C, epsilon 1##AK091309|SLC35G1|159371|solute carrier family 35, member G1##NM_001134658|SLC35G1|159371|solute carrier family 35, member G1##NM_153226|SLC35G1|159371|solute carrier family 35, member G1##BC036382|SLC35G1|159371|solute carrier family 35, member G1##BC143284|SLC35G1|159371|solute carrier family 35, member G1##BC104814|SLC35G1|159371|solute carrier family 35, member G1##BC047102|SLC35G1|159371|solute carrier family 35, member G1##AB077992|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##BC049850|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##NM_022451|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##AK091246|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##BC030999|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##AK292520|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##NM_015188|TBC1D12|23232|TBC1 domain family, member 12##AB011180|TBC1D12|23232|TBC1 domain family, member 12##AB449898|TBC1D12|23232|TBC1 domain family, member 12	0.9996	CTCF.p2:8:1.000
chr13	44378711	44378853	reg1016450.p1	8.766	+	TSC_hg19_v1_chr13_-_44361107 BC068521 NM_001242863 NM_017993	-17699	-	BC024178 NM_001127615	-175172	-	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	-781080	+	NM_001128303	74637	+	NM_144974 AK056408	75043	-	AK096044 NM_153218 TSC_hg19_v1_chr13_+_44453986 BC035749	75224	+	BC068521|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001242863|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_017993|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC024178|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001127615|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122##AK096044|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_153218|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC035749|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1	0.995574	CTCF.p2:16:0.996
chr19	3129234	3129352	reg1014079.p1	8.766	+	TSC_hg19_v1_chr19_+_3122573 BC051315 CU674752	-6688	+	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	-6900	+	TSC_hg19_v1_chr19_+_3094528 BC096225 BC096226 BC096227 AB463701 AF011497 AF493900 CR457004 AB209435	-34702	+	TSC_hg19_v1_chr19_+_3136030 GU727645 NM_002068 M63904 AK300481 AK291329 BC013585 GU727637	6851	+	NM_003775 TSC_hg19_v1_chr19_+_3178766 BC014970 AJ000479	49459	+	TSC_hg19_v1_chr19_+_3185896 NM_020170	56585	+	BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096225|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096226|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096227|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF011497|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF493900|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##CR457004|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AB209435|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##GU727645|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_002068|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##M63904|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK300481|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK291329|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC013585|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##GU727637|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_003775|S1PR4|8698|sphingosine-1-phosphate receptor 4##BC014970|S1PR4|8698|sphingosine-1-phosphate receptor 4##AJ000479|S1PR4|8698|sphingosine-1-phosphate receptor 4##NM_020170|NCLN|56926|nicalin	0.92281	CTCF.p2:0:0.923
chr3	128041015	128041150	reg1010667.p1	8.766	+	TSC_hg19_v1_chr3_+_127872325 BC007933 AF268872	-168644	+	TSC_hg19_v1_chr3_+_127872314 NM_021937	-168773	+	AB451224 AB451347 AB590226 BT007057 DQ469310 DQ891448 DQ894627 BC012886 TSC_hg19_v1_chr3_-_127842656 AB012122 AF099084 BC000519 BC002993 AF070735 AJ010058 AK222575 Y18418 AK222563 AK312290 NM_003707	-198459	-	BC050288 NM_153330	145008	-	TSC_hg19_v1_chr3_+_128199744 CU677364 CU678039	158721	+	M77810 BC015577 BC018988 BC051272 NM_001145662 M68891 TSC_hg19_v1_chr3_-_128206775	165657	-	BC007933|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AF268872|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##NM_021937|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AB451224|RUVBL1|8607|RuvB-like 1 (E. coli)##AB451347|RUVBL1|8607|RuvB-like 1 (E. coli)##BT007057|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ469310|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ891448|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ894627|RUVBL1|8607|RuvB-like 1 (E. coli)##BC012886|RUVBL1|8607|RuvB-like 1 (E. coli)##AB012122|RUVBL1|8607|RuvB-like 1 (E. coli)##AF099084|RUVBL1|8607|RuvB-like 1 (E. coli)##BC002993|RUVBL1|8607|RuvB-like 1 (E. coli)##AF070735|RUVBL1|8607|RuvB-like 1 (E. coli)##AJ010058|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222575|RUVBL1|8607|RuvB-like 1 (E. coli)##Y18418|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222563|RUVBL1|8607|RuvB-like 1 (E. coli)##AK312290|RUVBL1|8607|RuvB-like 1 (E. coli)##NM_003707|RUVBL1|8607|RuvB-like 1 (E. coli)##BC050288|DNAJB8|165721|DnaJ (Hsp40) homolog, subfamily B, member 8##NM_153330|DNAJB8|165721|DnaJ (Hsp40) homolog, subfamily B, member 8##M77810|GATA2|2624|GATA binding protein 2##BC015577|GATA2|2624|GATA binding protein 2##BC018988|GATA2|2624|GATA binding protein 2##BC051272|GATA2|2624|GATA binding protein 2##NM_001145662|GATA2|2624|GATA binding protein 2##M68891|GATA2|2624|GATA binding protein 2	0.997385	CTCF.p2:0:0.997
chr10	75023731	75023882	reg1017164.p1	8.765	+	AB529029 TSC_hg19_v1_chr10_-_75012387 AB049948 BC021106 AK025715 AK098291 AK303204 AF151890 NM_016065	-11459	-	TSC_hg19_v1_chr10_-_75007006 AF327347 BC136507 AK074420 NM_015190	-16775	-	TSC_hg19_v1_chr10_+_74927876 NM_173348	-95912	+	AK308746 AL833537 BC032856 NM_145170	94753	-	TSC_hg19_v1_chr10_-_75173787 AK313024	149949	-	TSC_hg19_v1_chr10_-_75173792 AB062429 BC002632	149989	-	AB049948|MRPS16|51021|mitochondrial ribosomal protein S16##BC021106|MRPS16|51021|mitochondrial ribosomal protein S16##AK025715|MRPS16|51021|mitochondrial ribosomal protein S16##AK098291|MRPS16|51021|mitochondrial ribosomal protein S16##AF151890|MRPS16|51021|mitochondrial ribosomal protein S16##NM_016065|MRPS16|51021|mitochondrial ribosomal protein S16##AF327347|DNAJC9|23234|DnaJ (Hsp40) homolog, subfamily C, member 9##BC136507|DNAJC9|23234|DnaJ (Hsp40) homolog, subfamily C, member 9##AK074420|DNAJC9|23234|DnaJ (Hsp40) homolog, subfamily C, member 9##NM_015190|DNAJC9|23234|DnaJ (Hsp40) homolog, subfamily C, member 9##NM_173348|FAM149B1|317662|family with sequence similarity 149, member B1##AK308746|TTC18|118491|tetratricopeptide repeat domain 18##AL833537|TTC18|118491|tetratricopeptide repeat domain 18##BC032856|TTC18|118491|tetratricopeptide repeat domain 18##NM_145170|TTC18|118491|tetratricopeptide repeat domain 18##AK313024|ANXA7|310|annexin A7##AB062429|ANXA7|310|annexin A7##BC002632|ANXA7|310|annexin A7	0.410824	CTCF.p2:3:0.411
chr4	111553125	111553261	reg1014962.p1	8.765	+	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-8918	-	AK313987 TSC_hg19_v1_chr4_-_111543909	-9283	-	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	-155820	+	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	4976	-	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	10085	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	1513421	+	AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##AK313987|PITX2|5308|paired-like homeodomain 2##AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32	0.0	
chr9	15606748	15606880	reg1013572.p1	8.765	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-53793	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-95854	-	AF098483 AF098482 NM_021144	-96567	-	TSC_hg19_v1_chr9_-_16727889 AY438376	1121083	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	1263853	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	1263952	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.894919	CTCF.p2:29:0.895
chrX	62348117	62348259	reg1014301.p1	8.765	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-4411229	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-4729728	+	NM_007157	-4729920	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	223011	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	300079	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	432679	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.0	
chr15	96900184	96900340	reg1014415.p1	8.764	+	NM_001145157	-23694	+	AK316086 NM_001145156	-24469	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	-26285	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	426410	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	1603657	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	1603689	+	NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4	0.011401	
chr5	133638662	133638785	reg1015397.p1	8.764	+	TSC_hg19_v1_chr5_-_133561906 NM_002715	-76820	-	TSC_hg19_v1_chr5_-_133561763 BC000400 BC002657 BC019275 BC031696 AK057424 AK097599	-76968	-	AB451240 AB451365 CR457417 AB385080 X12646 TSC_hg19_v1_chr5_-_133561733 J03804	-77079	-	BC041799 NM_001113575 NM_016508 TSC_hg19_v1_chr5_-_133702854	64091	-	TSC_hg19_v1_chr5_-_133706735 AK301802 AK294740 AK294559 AK299305 AK297586 AK310955	68006	-	M74525 NM_003337 TSC_hg19_v1_chr5_+_133706874	68151	+	NM_002715|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC000400|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC002657|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC019275|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC031696|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AK057424|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AK097599|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AB451240|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AB451365|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##CR457417|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##X12646|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##J03804|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##BC041799|CDKL3|51265|cyclin-dependent kinase-like 3##NM_001113575|CDKL3|51265|cyclin-dependent kinase-like 3##NM_016508|CDKL3|51265|cyclin-dependent kinase-like 3##AK301802|CDKL3|51265|cyclin-dependent kinase-like 3##AK294740|CDKL3|51265|cyclin-dependent kinase-like 3##AK294559|CDKL3|51265|cyclin-dependent kinase-like 3##AK299305|CDKL3|51265|cyclin-dependent kinase-like 3##AK297586|CDKL3|51265|cyclin-dependent kinase-like 3##AK310955|CDKL3|51265|cyclin-dependent kinase-like 3##M74525|UBE2B|7320|ubiquitin-conjugating enzyme E2B##NM_003337|UBE2B|7320|ubiquitin-conjugating enzyme E2B	0.331719	CTCF.p2:-19:0.332
chr4	122113706	122113852	reg1016710.p1	8.763	+	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	-28295	-	BC019351 AK289615 NM_024574 TSC_hg19_v1_chr4_-_121993690	-120149	-	TSC_hg19_v1_chr4_-_121843992 AB464059 BC121037 BC121038 AK314293 AK310958 AF272897 AK056352 NM_018699 BC066942	-269784	-	AK301058 NM_001128843	24002	-	AK303192 NM_001244764	34841	-	TSC_hg19_v1_chr4_-_122302115 NM_198179 AK309337	188383	-	AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3##BC019351|NDNF|79625|neuron-derived neurotrophic factor##AK289615|NDNF|79625|neuron-derived neurotrophic factor##NM_024574|NDNF|79625|neuron-derived neurotrophic factor##BC121037|PRDM5|11107|PR domain containing 5##BC121038|PRDM5|11107|PR domain containing 5##AK314293|PRDM5|11107|PR domain containing 5##AK310958|PRDM5|11107|PR domain containing 5##AF272897|PRDM5|11107|PR domain containing 5##AK056352|PRDM5|11107|PR domain containing 5##NM_018699|PRDM5|11107|PR domain containing 5##BC066942|PRDM5|11107|PR domain containing 5##AK301058|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3##AK303192|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3##NM_198179|QRFPR|84109|pyroglutamylated RFamide peptide receptor##AK309337|QRFPR|84109|pyroglutamylated RFamide peptide receptor	0.986589	CTCF.p2:-11:0.987
chr6	38839895	38840027	reg1017621.p1	8.763	+	AF527621 NM_001206927	-156845	+	TSC_hg19_v1_chr6_-_38670922 NM_006708	-169024	-	AK312662 TSC_hg19_v1_chr6_-_38670921	-169041	-	BC112126 BC113493 NM_002062 TSC_hg19_v1_chr6_+_39016556 U01104 L23503 AB463688 U01156 U01157	176625	+	AF086405 TSC_hg19_v1_chr6_-_39072506	232498	-	TSC_hg19_v1_chr6_-_39082938 CR627244 AK001963 NM_018322 EU832483 EU832563 BC022007	242885	-	AF527621|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_001206927|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_006708|GLO1|2739|glyoxalase I##AK312662|GLO1|2739|glyoxalase I##BC112126|GLP1R|2740|glucagon-like peptide 1 receptor##BC113493|GLP1R|2740|glucagon-like peptide 1 receptor##NM_002062|GLP1R|2740|glucagon-like peptide 1 receptor##U01104|GLP1R|2740|glucagon-like peptide 1 receptor##L23503|GLP1R|2740|glucagon-like peptide 1 receptor##U01156|GLP1R|2740|glucagon-like peptide 1 receptor##U01157|GLP1R|2740|glucagon-like peptide 1 receptor##AF086405|C6orf64|55776|chromosome 6 open reading frame 64##CR627244|C6orf64|55776|chromosome 6 open reading frame 64##AK001963|C6orf64|55776|chromosome 6 open reading frame 64##NM_018322|C6orf64|55776|chromosome 6 open reading frame 64##EU832483|C6orf64|55776|chromosome 6 open reading frame 64##EU832563|C6orf64|55776|chromosome 6 open reading frame 64##BC022007|C6orf64|55776|chromosome 6 open reading frame 64	0.259628	CTCF.p2:-11:0.260
chr6	75119311	75119425	reg1014482.p1	8.763	+	TSC_hg19_v1_chr6_+_74406033 AY149920	-713344	+	EF553520 TSC_hg19_v1_chr6_+_74405925 AY788891 BX641095	-713448	+	TSC_hg19_v1_chr6_+_74405882 AK095888	-713497	+	BC146868 U73778 NM_004370 NM_080645 TSC_hg19_v1_chr6_-_75915745	796287	-	TSC_hg19_v1_chr6_-_75915768 AK307558	796412	-	CR407646 CR542125 X15822 TSC_hg19_v1_chr6_-_75953494 BC101826 BC101828 AK312154	834111	-	AY149920|CD109|135228|CD109 molecule##EF553520|CD109|135228|CD109 molecule##AY788891|CD109|135228|CD109 molecule##BX641095|CD109|135228|CD109 molecule##AK095888|CD109|135228|CD109 molecule##BC146868|COL12A1|1303|collagen, type XII, alpha 1##U73778|COL12A1|1303|collagen, type XII, alpha 1##NM_004370|COL12A1|1303|collagen, type XII, alpha 1##NM_080645|COL12A1|1303|collagen, type XII, alpha 1##AK307558|COL12A1|1303|collagen, type XII, alpha 1##CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	0.356291	CTCF.p2:-14:0.356
chr6_dbb_hap3	2457580	2457697	reg1015559.p1	8.763	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.998737	CTCF.p2:2:0.999
chr10	135251387	135251512	reg1013880.p1	8.762	+	BC040198 TSC_hg19_v1_chr10_-_135238130 NM_001012508	-13347	-	TSC_hg19_v1_chr10_+_135207660 NM_138384 BC026039 AK308997 BC004409 AK074976 AK293988 BC035721 EU831415 EU831508 BC026725 AK292515 AK125012	-43717	+	AF312698 BC032778 NM_152911 NM_207127 NM_207128 TSC_hg19_v1_chr10_+_135192774 AY541516 AY541513 AY541514 AY541515 AY541517 AY541518 AY541519 AY541520 AY541521 AY541523 AY541524 AY358418 DQ891313 DQ893351 DQ894497 DQ896670	-58692	+	TSC_hg19_v1_chr10_+_135340866 AK290822 NM_000773 J02625 AF182276 DQ149222 BC067435 BC067433 CU688292 AF084225 AJ853939 AJ853940 AJ877238	89483	+	AK309935 AK314978 BC034821 NM_001143763 NM_001143764	127660	-	AY027807 NM_130784	131426	-	BC040198|SPRN|503542|shadow of prion protein homolog (zebrafish)##NM_001012508|SPRN|503542|shadow of prion protein homolog (zebrafish)##NM_138384|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026039|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK308997|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC004409|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK074976|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK293988|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC035721|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831415|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831508|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026725|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK292515|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK125012|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AF312698|PAOX|196743|polyamine oxidase (exo-N4-amino)##BC032778|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_152911|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207127|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207128|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541516|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541513|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541514|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541515|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541517|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541518|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541519|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541520|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541521|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541523|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541524|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY358418|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ891313|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ893351|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ894497|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ896670|PAOX|196743|polyamine oxidase (exo-N4-amino)##AK290822|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##NM_000773|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##J02625|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF182276|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##DQ149222|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067435|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067433|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF084225|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853939|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853940|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ877238|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AK309935|SYCE1|93426|synaptonemal complex central element protein 1##AK314978|SYCE1|93426|synaptonemal complex central element protein 1##BC034821|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143763|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143764|SYCE1|93426|synaptonemal complex central element protein 1##AY027807|SYCE1|93426|synaptonemal complex central element protein 1##NM_130784|SYCE1|93426|synaptonemal complex central element protein 1	0.694155	CTCF.p2:-14:0.694
chr1	209376313	209376424	reg1011116.p1	8.762	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-958719	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-1291811	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-1291985	-	AK091113 AX746785 NM_001104548	225797	+	NM_020439 AK095713 AK289675 AF428261 BC032787	380692	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	448311	-	NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3	0.995603	CTCF.p2:-8:0.996
chr13	85470417	85470531	reg1015309.p1	8.762	+	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-1013974	-	TSC_hg19_v1_chr13_-_84456424 BC051738	-1014049	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-4555410	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	902965	-	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	2854395	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	6580430	+	AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5	0.999705	CTCF.p2:-15:1.000
chr18	2985737	2985867	reg1015237.p1	8.762	+	AB026706 TSC_hg19_v1_chr18_+_2907037	-78801	+	TSC_hg19_v1_chr18_+_2847006 AF270513 NM_032048 BC032231 BC136541	-138771	+	BC006008 NM_015295 TSC_hg19_v1_chr18_+_2655885	-329888	+	BC152448 D87436 NM_014646	26142	-	BC116183 BC116184 TSC_hg19_v1_chr18_-_3219875	234058	-	TSC_hg19_v1_chr18_-_3219987 AJ621424 AK125322 NM_003803 NM_019856	234243	-	AB026706|EMILIN2|84034|elastin microfibril interfacer 2##AF270513|EMILIN2|84034|elastin microfibril interfacer 2##NM_032048|EMILIN2|84034|elastin microfibril interfacer 2##BC032231|EMILIN2|84034|elastin microfibril interfacer 2##BC136541|EMILIN2|84034|elastin microfibril interfacer 2##BC006008|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##NM_015295|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##BC152448|LPIN2|9663|lipin 2##D87436|LPIN2|9663|lipin 2##NM_014646|LPIN2|9663|lipin 2##BC116183|MYOM1|8736|myomesin 1, 185kDa##BC116184|MYOM1|8736|myomesin 1, 185kDa##AJ621424|MYOM1|8736|myomesin 1, 185kDa##AK125322|MYOM1|8736|myomesin 1, 185kDa##NM_003803|MYOM1|8736|myomesin 1, 185kDa##NM_019856|MYOM1|8736|myomesin 1, 185kDa	0.687965	CTCF.p2:14:0.688
chr6	43919115	43919248	reg1015288.p1	8.762	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-180311	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-180647	+	TSC_hg19_v1_chr6_+_43738284 AF022375	-180934	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	49193	+	CR627460 TSC_hg19_v1_chr6_+_44094741	175517	+	TSC_hg19_v1_chr6_-_44095161 AK312086	175979	-	M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##AF022375|VEGFA|7422|vascular endothelial growth factor A##BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14	0.0	
chr6	52370644	52370761	reg1014275.p1	8.762	+	AK297632 NM_001172420	-84898	+	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	-85624	+	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	-143745	+	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	71056	-	TSC_hg19_v1_chr6_-_52441859 AK291751 AB621814 BC028121 NM_012288	71149	-	AK095117 TSC_hg19_v1_chr6_+_52442225	71472	+	AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2##AK291751|TRAM2|9697|translocation associated membrane protein 2##BC028121|TRAM2|9697|translocation associated membrane protein 2##NM_012288|TRAM2|9697|translocation associated membrane protein 2##AK095117|FLJ37798|401264|uncharacterized LOC401264	0.913202	CTCF.p2:16:0.913
chr11	47475875	47475996	reg1015909.p1	8.761	+	AK310002 BC004196 Z33905 AF449218 NM_005055 NM_032645	-5227	-	BC106920 TSC_hg19_v1_chr11_-_47447991 BC073165 BC107804 BC008713 AK313518 NM_002804	-27954	-	M34079 TSC_hg19_v1_chr11_-_47447799 AK222485 AK291896 DQ892981 DQ896229	-28130	-	AK304430 AJ007988 DQ893717 AF248648 NM_001025596 NM_001172640 AF267533 AF267534	34612	-	BC031079 NM_198700	40137	-	AB210019 NM_001172639	69604	-	AK310002|RAPSN|5913|receptor-associated protein of the synapse##BC004196|RAPSN|5913|receptor-associated protein of the synapse##Z33905|RAPSN|5913|receptor-associated protein of the synapse##AF449218|RAPSN|5913|receptor-associated protein of the synapse##NM_005055|RAPSN|5913|receptor-associated protein of the synapse##NM_032645|RAPSN|5913|receptor-associated protein of the synapse##BC106920|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##BC073165|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##BC107804|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##BC008713|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##AK313518|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##NM_002804|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##M34079|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##AK222485|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##AK291896|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##DQ892981|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##DQ896229|PSMC3|5702|proteasome (prosome, macropain) 26S subunit, ATPase, 3##AK304430|CELF1|10658|CUGBP, Elav-like family member 1##AJ007988|CELF1|10658|CUGBP, Elav-like family member 1##DQ893717|CELF1|10658|CUGBP, Elav-like family member 1##AF248648|CELF1|10658|CUGBP, Elav-like family member 1##NM_001025596|CELF1|10658|CUGBP, Elav-like family member 1##NM_001172640|CELF1|10658|CUGBP, Elav-like family member 1##AF267533|CELF1|10658|CUGBP, Elav-like family member 1##AF267534|CELF1|10658|CUGBP, Elav-like family member 1##BC031079|CELF1|10658|CUGBP, Elav-like family member 1##NM_198700|CELF1|10658|CUGBP, Elav-like family member 1##AB210019|CELF1|10658|CUGBP, Elav-like family member 1##NM_001172639|CELF1|10658|CUGBP, Elav-like family member 1	0.999004	CTCF.p2:9:0.999
chr1	154879256	154879386	reg1016338.p1	8.761	+	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	-36575	-	BX649146 TSC_hg19_v1_chr1_-_154840541	-38820	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	-47059	-	BT019976 CR541998 TSC_hg19_v1_chr1_-_154909187 L77213	29853	-	TSC_hg19_v1_chr1_-_154909401 BC007694 BC000237 AK130234 AK312803 BC006089 NM_006556	30112	-	TSC_hg19_v1_chr1_-_154928571 BC016852 NM_020524 AF221521 AK023219 AK303413 AK303863 AK300987	49258	-	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BT019976|PMVK|10654|phosphomevalonate kinase##CR541998|PMVK|10654|phosphomevalonate kinase##L77213|PMVK|10654|phosphomevalonate kinase##BC007694|PMVK|10654|phosphomevalonate kinase##AK130234|PMVK|10654|phosphomevalonate kinase##AK312803|PMVK|10654|phosphomevalonate kinase##BC006089|PMVK|10654|phosphomevalonate kinase##NM_006556|PMVK|10654|phosphomevalonate kinase##BC016852|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##NM_020524|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AF221521|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK023219|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303413|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303863|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK300987|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1	0.06186	
chr14	23292114	23292253	reg1015226.p2	8.761	+	Y18474 BX248291 AF092032 AJ130718 NM_001126106	-3218	-	AB020532 BX161519 NM_001126105	-7125	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	-7551	-	TSC_hg19_v1_chr14_+_23299095 AK096946 NM_178336 NM_180982 NM_181304 NM_181305 NM_181306 NM_181307	6908	+	TSC_hg19_v1_chr14_+_23299104 AK292011 AK000450 BX248749 BC055381 BC068070	6927	+	NM_004995 AK312657 TSC_hg19_v1_chr14_+_23305800 AK291325 BC064803	13617	+	Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AB020532|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX161519|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126105|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK096946|MRPL52|122704|mitochondrial ribosomal protein L52##NM_178336|MRPL52|122704|mitochondrial ribosomal protein L52##NM_180982|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181304|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181305|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181306|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181307|MRPL52|122704|mitochondrial ribosomal protein L52##AK292011|MRPL52|122704|mitochondrial ribosomal protein L52##AK000450|MRPL52|122704|mitochondrial ribosomal protein L52##BX248749|MRPL52|122704|mitochondrial ribosomal protein L52##BC055381|MRPL52|122704|mitochondrial ribosomal protein L52##BC068070|MRPL52|122704|mitochondrial ribosomal protein L52##NM_004995|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##AK312657|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##AK291325|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##BC064803|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	0.84087	CTCF.p2:0:0.787
chr8	124934764	124934904	reg1016675.p1	8.761	+	AB196633 NM_001039112	-70608	+	TSC_hg19_v1_chr8_+_124780758 DQ228141 NM_144963 BC144630	-154021	+	TSC_hg19_v1_chr8_+_124780681 AK300603 BC030520	-154144	+	BC101502 BC101506 AK057332 TSC_hg19_v1_chr8_-_125183771	248904	-	TSC_hg19_v1_chr8_-_125384925 BC041379 NM_194291	450118	-	TSC_hg19_v1_chr8_+_125463060 NM_017956 AK225083 AK000779 AK222727 BC011713 BC003057	528238	+	AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)##DQ228141|FAM91A1|157769|family with sequence similarity 91, member A1##NM_144963|FAM91A1|157769|family with sequence similarity 91, member A1##BC144630|FAM91A1|157769|family with sequence similarity 91, member A1##AK300603|FAM91A1|157769|family with sequence similarity 91, member A1##BC030520|FAM91A1|157769|family with sequence similarity 91, member A1##BC101502|C8orf78|157376|chromosome 8 open reading frame 78##BC101506|C8orf78|157376|chromosome 8 open reading frame 78##AK057332|C8orf78|157376|chromosome 8 open reading frame 78##BC041379|TMEM65|157378|transmembrane protein 65##NM_194291|TMEM65|157378|transmembrane protein 65##NM_017956|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK225083|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK000779|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK222727|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC011713|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC003057|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)	0.964367	CTCF.p2:-1:0.964
chr1	104057680	104057802	reg1014612.p2	8.760	+	NM_001190709 NM_001854 NM_080629 NM_080630 TSC_hg19_v1_chr1_-_103574051	-483690	-	J04177 TSC_hg19_v1_chr1_-_103574032 BC117697	-483770	-	AB208844 TSC_hg19_v1_chr1_-_103496798	-560958	-	AK289844 TSC_hg19_v1_chr1_+_104068344 AB058742	10590	+	TSC_hg19_v1_chr1_+_104068567 NM_017619 AY099329 AK057799 BC010697 AB463239	10888	+	NM_020978	39580	+	NM_001190709|COL11A1|1301|collagen, type XI, alpha 1##NM_001854|COL11A1|1301|collagen, type XI, alpha 1##NM_080629|COL11A1|1301|collagen, type XI, alpha 1##NM_080630|COL11A1|1301|collagen, type XI, alpha 1##J04177|COL11A1|1301|collagen, type XI, alpha 1##BC117697|COL11A1|1301|collagen, type XI, alpha 1##AB208844|COL11A1|1301|collagen, type XI, alpha 1##AK289844|RNPC3|55599|RNA-binding region (RNP1, RRM) containing 3##NM_017619|RNPC3|55599|RNA-binding region (RNP1, RRM) containing 3##AY099329|RNPC3|55599|RNA-binding region (RNP1, RRM) containing 3##AK057799|RNPC3|55599|RNA-binding region (RNP1, RRM) containing 3##BC010697|RNPC3|55599|RNA-binding region (RNP1, RRM) containing 3##NM_020978|AMY2B|280|amylase, alpha 2B (pancreatic)	0.211154	CTCF.p2:2:0.211
chr12	130516240	130516381	reg1016115.p1	8.760	+	BC114626 BC114936 NM_133448 AB061814	-128099	-	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	-1178223	+	BC043528 TSC_hg19_v1_chr12_+_129337985	-1178326	+	AK056047 TSC_hg19_v1_chr12_-_130646911	130546	-	TSC_hg19_v1_chr12_+_130647008 BC070037 NM_007197	130700	+	NM_001190971 NM_004764	306122	+	BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056047|FLJ31485|440119|uncharacterized LOC440119##BC070037|FZD10|11211|frizzled family receptor 10##NM_007197|FZD10|11211|frizzled family receptor 10##NM_001190971|PIWIL1|9271|piwi-like 1 (Drosophila)##NM_004764|PIWIL1|9271|piwi-like 1 (Drosophila)	1.231456	CTCF.p2:-19:0.232	CTCF.p2:20:1.000
chr14	92819084	92819217	reg1016124.p1	8.760	+	NM_153646 AF520704 AF520705 BC069653	-28974	+	AK295059 NM_153647	-29614	+	AF520706 NM_153648	-30226	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	160809	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	299486	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	299673	+	NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520706|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153648|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3	0.987393	CTCF.p2:2:0.987
chr9	132404602	132404773	reg1013418.p2	8.760	+	CU688098 EU831817 EU831894 BC065913 TSC_hg19_v1_chr9_-_132404419 AK023004 BC001719 AK225618 AK299193 AK000555 AK292807 NM_001202403 NM_017873 NM_177999	-318	-	TSC_hg19_v1_chr9_+_132388461 BC001396 BC033234 AF110776	-16217	+	TSC_hg19_v1_chr9_+_132388441 NM_014064 AK290957 AK292332 AK298840 AK307056 AK313829	-16262	+	BC014645 NM_016307 TSC_hg19_v1_chr9_+_132427927	23236	+	TSC_hg19_v1_chr9_+_132428029 AF061970	23379	+	AB590756 AF027740 AF217965 AF010316 TSC_hg19_v1_chr9_-_132515313 AK311947 BC008280 NM_004878	110629	-	EU831817|ASB6|140459|ankyrin repeat and SOCS box containing 6##EU831894|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC065913|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK023004|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC001719|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK225618|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK299193|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK000555|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK292807|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_001202403|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_017873|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_177999|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC001396|METTL11A|28989|methyltransferase like 11A##BC033234|METTL11A|28989|methyltransferase like 11A##AF110776|METTL11A|28989|methyltransferase like 11A##NM_014064|METTL11A|28989|methyltransferase like 11A##AK290957|METTL11A|28989|methyltransferase like 11A##AK292332|METTL11A|28989|methyltransferase like 11A##AK298840|METTL11A|28989|methyltransferase like 11A##AK307056|METTL11A|28989|methyltransferase like 11A##AK313829|METTL11A|28989|methyltransferase like 11A##BC014645|PRRX2|51450|paired related homeobox 2##NM_016307|PRRX2|51450|paired related homeobox 2##AF061970|PRRX2|51450|paired related homeobox 2##AF027740|PTGES|9536|prostaglandin E synthase##AF217965|PTGES|9536|prostaglandin E synthase##AF010316|PTGES|9536|prostaglandin E synthase##AK311947|PTGES|9536|prostaglandin E synthase##BC008280|PTGES|9536|prostaglandin E synthase##NM_004878|PTGES|9536|prostaglandin E synthase	0.0	
chr9	92208879	92208995	reg1015602.p1	8.760	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-95930	-	BC054500 NM_001142287 NM_006378	-114327	-	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-275519	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	11044	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	1196182	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1355099	+	BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase	0.630392	CTCF.p2:3:0.630
chrX	102466085	102466190	reg1015035.p1	8.760	+	CU689204 DQ891319 DQ894503 BC031616 AF346619 AJ277527 NM_022052 AK302447 TSC_hg19_v1_chrX_-_102348072 AK302586	-118084	-	TSC_hg19_v1_chrX_-_102319100 AF237783 AK290958 NM_018476	-147006	-	AF220189 AY833561 TSC_hg19_v1_chrX_-_102319085	-147055	-	TSC_hg19_v1_chrX_+_102470035 NM_001080425 NM_001127688 AK000959 AY833563 BC015794 BC068069	3912	+	TSC_hg19_v1_chrX_-_102510102 AK026349 AL833632 NM_001006684 NM_153333	43953	-	BC132922 BC132924 NM_001012979	65597	-	DQ891319|NXF3|56000|nuclear RNA export factor 3##DQ894503|NXF3|56000|nuclear RNA export factor 3##BC031616|NXF3|56000|nuclear RNA export factor 3##AF346619|NXF3|56000|nuclear RNA export factor 3##AJ277527|NXF3|56000|nuclear RNA export factor 3##NM_022052|NXF3|56000|nuclear RNA export factor 3##AK302447|NXF3|56000|nuclear RNA export factor 3##AK302586|NXF3|56000|nuclear RNA export factor 3##AF237783|BEX1|55859|brain expressed, X-linked 1##AK290958|BEX1|55859|brain expressed, X-linked 1##NM_018476|BEX1|55859|brain expressed, X-linked 1##AF220189|BEX1|55859|brain expressed, X-linked 1##AY833561|BEX1|55859|brain expressed, X-linked 1##NM_001080425|BEX4|56271|brain expressed, X-linked 4##NM_001127688|BEX4|56271|brain expressed, X-linked 4##AK000959|BEX4|56271|brain expressed, X-linked 4##AY833563|BEX4|56271|brain expressed, X-linked 4##BC015794|BEX4|56271|brain expressed, X-linked 4##BC068069|BEX4|56271|brain expressed, X-linked 4##AK026349|TCEAL8|90843|transcription elongation factor A (SII)-like 8##AL833632|TCEAL8|90843|transcription elongation factor A (SII)-like 8##NM_001006684|TCEAL8|90843|transcription elongation factor A (SII)-like 8##NM_153333|TCEAL8|90843|transcription elongation factor A (SII)-like 8##BC132922|TCEAL5|340543|transcription elongation factor A (SII)-like 5##BC132924|TCEAL5|340543|transcription elongation factor A (SII)-like 5##NM_001012979|TCEAL5|340543|transcription elongation factor A (SII)-like 5	0.983826	CTCF.p2:-9:0.984
chr10	22278652	22278774	reg1017881.p1	8.758	+	AY598745 CU687346 NM_001195626 AF060929 AF060934 AF060935 AF060936 AF060937 AF060938	-455088	+	TSC_hg19_v1_chr10_+_21823382 AB209755 BC052798 BC094844 BC129946	-455319	+	U13948 TSC_hg19_v1_chr10_+_21823274 BC065376 BC080577	-455437	+	AY225122 AK027263 TSC_hg19_v1_chr10_-_22292522 BC014436	13736	-	TSC_hg19_v1_chr10_-_22292660 BC110894 NM_022365 AK308369	13952	-	NM_001199938	220198	-	AY598745|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##NM_001195626|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060929|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060934|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060935|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060936|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060937|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060938|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AB209755|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC052798|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC094844|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC129946|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##U13948|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC065376|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC080577|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AY225122|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK027263|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC014436|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1	0.087727	
chr18	49195142	49195248	reg1000578.p4	8.758	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-471155	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-471483	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-471969	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	671346	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	671918	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2495797	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.036241	
chr2	192083172	192083285	reg1014207.p1	8.758	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-66921	-	TSC_hg19_v1_chr2_-_192015965 NM_003151	-67269	-	L78440 TSC_hg19_v1_chr2_-_192015772 AK301172	-67459	-	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	26870	+	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	459634	+	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	628510	-	BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##NM_003151|STAT4|6775|signal transducer and activator of transcription 4##L78440|STAT4|6775|signal transducer and activator of transcription 4##AK301172|STAT4|6775|signal transducer and activator of transcription 4##NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response	0.999778	CTCF.p2:-12:1.000
chr3	12179621	12179757	reg1017363.p1	8.758	+	TSC_hg19_v1_chr3_+_12045861 NM_003178 NM_133625 AK094464 BC051307 AB209088 U40215 AF077671 AF077737	-133786	+	EU832515 EU832596 AK295839 TSC_hg19_v1_chr3_-_11888358 AK310993 BC015088 NM_138807 AK092776 AX747723 AK309733 AK303598	-291430	-	TSC_hg19_v1_chr3_-_11762012 D50911 BC001514 AK130542 BC000763 BC003038 NM_014667	-417574	-	BT019627 CU679743 DQ891795 DQ894978 U76456 TSC_hg19_v1_chr3_-_12200413 AK313018	20690	-	BC010553 NM_003256	21161	-	TSC_hg19_v1_chr3_+_12329422 NM_005037 NM_138712 X90563 AK290581	149767	+	NM_003178|SYN2|6854|synapsin II##NM_133625|SYN2|6854|synapsin II##AK094464|SYN2|6854|synapsin II##BC051307|SYN2|6854|synapsin II##AB209088|SYN2|6854|synapsin II##U40215|SYN2|6854|synapsin II##AF077671|SYN2|6854|synapsin II##AF077737|SYN2|6854|synapsin II##EU832515|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##EU832596|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK295839|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK310993|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##BC015088|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_138807|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK092776|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK309733|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK303598|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##D50911|VGLL4|9686|vestigial like 4 (Drosophila)##BC001514|VGLL4|9686|vestigial like 4 (Drosophila)##AK130542|VGLL4|9686|vestigial like 4 (Drosophila)##BC000763|VGLL4|9686|vestigial like 4 (Drosophila)##BC003038|VGLL4|9686|vestigial like 4 (Drosophila)##NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)##BT019627|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ891795|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ894978|TIMP4|7079|TIMP metallopeptidase inhibitor 4##U76456|TIMP4|7079|TIMP metallopeptidase inhibitor 4##AK313018|TIMP4|7079|TIMP metallopeptidase inhibitor 4##BC010553|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_003256|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_005037|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138712|PPARG|5468|peroxisome proliferator-activated receptor gamma##X90563|PPARG|5468|peroxisome proliferator-activated receptor gamma##AK290581|PPARG|5468|peroxisome proliferator-activated receptor gamma	0.858689	CTCF.p2:-4:0.766
chr3	10800394	10800505	reg1015806.p1	8.757	+	L20977 TSC_hg19_v1_chr3_-_10749723	-50727	-	AB210008 TSC_hg19_v1_chr3_-_10547352	-253103	-	AK308898 NM_001001331 NM_001683 TSC_hg19_v1_chr3_-_10547271	-253180	-	TSC_hg19_v1_chr3_+_10857912 AK312719 BC036083 NM_014229 S75989 AB527355	57458	+	NM_003042 TSC_hg19_v1_chr3_+_11034421	233972	+	TSC_hg19_v1_chr3_+_11034439 BC057291 BC033904	234013	+	L20977|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC057291|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC033904|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1	0.992405	CTCF.p2:-14:0.992
chr18	22068989	22069108	reg1013607.p2	8.756	+	AF312230 BC069136 NM_001143828 NM_001160166 NM_021624 AB045370 BC112348 AB044934 AF307973 AF325356 AF329449 AJ298292 AY008280 AY136745 DQ835186 DQ835187	-28406	+	TSC_hg19_v1_chr18_+_22006671 AK312727 BC034016 AB026264 AB587563 CU689806 DQ893141 EU176771 AF208694	-62383	+	TSC_hg19_v1_chr18_+_22006608 AK292533 NM_018439 BC036074	-62441	+	TSC_hg19_v1_chr18_-_22931121 AB385259	862100	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	862989	-	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	863115	-	AF312230|HRH4|59340|histamine receptor H4##BC069136|HRH4|59340|histamine receptor H4##NM_001143828|HRH4|59340|histamine receptor H4##NM_001160166|HRH4|59340|histamine receptor H4##NM_021624|HRH4|59340|histamine receptor H4##AB045370|HRH4|59340|histamine receptor H4##BC112348|HRH4|59340|histamine receptor H4##AB044934|HRH4|59340|histamine receptor H4##AF307973|HRH4|59340|histamine receptor H4##AF325356|HRH4|59340|histamine receptor H4##AF329449|HRH4|59340|histamine receptor H4##AJ298292|HRH4|59340|histamine receptor H4##AY008280|HRH4|59340|histamine receptor H4##AY136745|HRH4|59340|histamine receptor H4##DQ835186|HRH4|59340|histamine receptor H4##DQ835187|HRH4|59340|histamine receptor H4##AK312727|IMPACT|55364|Impact homolog (mouse)##BC034016|IMPACT|55364|Impact homolog (mouse)##AB026264|IMPACT|55364|Impact homolog (mouse)##DQ893141|IMPACT|55364|Impact homolog (mouse)##EU176771|IMPACT|55364|Impact homolog (mouse)##AF208694|IMPACT|55364|Impact homolog (mouse)##AK292533|IMPACT|55364|Impact homolog (mouse)##NM_018439|IMPACT|55364|Impact homolog (mouse)##BC036074|IMPACT|55364|Impact homolog (mouse)##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521	0.887707	CTCF.p2:1:0.888
chr5	11267514	11267616	reg1015973.p1	8.755	+	TSC_hg19_v1_chr5_-_10761361 NM_004394	-506166	-	TSC_hg19_v1_chr5_-_10761341 BC002726	-506223	-	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	-506306	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	636471	-	TSC_hg19_v1_chr5_-_11904184 AK296232	636619	-	AX800026 AY045575 NM_001369	2677023	-	NM_004394|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5	0.968124	CTCF.p2:5:0.968
chr10	61050362	61050486	reg1015793.p1	8.754	+	AL365474 NM_001143774 AM393181	-113136	+	BC011268 AK054956 TSC_hg19_v1_chr10_+_60936573 AB384640 AM392743	-113864	+	AL834339 NM_032439 TSC_hg19_v1_chr10_+_60936408 CR749429	-114036	+	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	71861	-	AK299924 NM_001143773	72236	-	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	419300	-	AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)	0.149394	
chr17	68763374	68763515	reg1015240.p1	8.754	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-597748	+	BC033038 NM_170742	-662450	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-692014	+	TSC_hg19_v1_chr17_-_70116937 AL833139	1353494	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	1353715	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	1353726	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.892412	CTCF.p2:-2:0.892
chr2	68936688	68936833	reg1014844.p1	8.754	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	-63807	+	TSC_hg19_v1_chr2_+_68694716 AK290841 NM_173545 AK308186 BC041144 CU691972	-241996	+	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	-242350	-	NM_001007231 NM_001166277 AK297056 TSC_hg19_v1_chr2_+_68962066 AK310742 AK290396	25313	+	BC032222 NM_001166276 NM_014882 AK311669 TSC_hg19_v1_chr2_+_69002068 BC039591 AK297157 AK298669 D29642	65265	+	BC069080 BC101734 BC105063 AF101441 NM_014482	161815	-	AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1##AK290841|APLF|200558|aprataxin and PNKP like factor##NM_173545|APLF|200558|aprataxin and PNKP like factor##AK308186|APLF|200558|aprataxin and PNKP like factor##BC041144|APLF|200558|aprataxin and PNKP like factor##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48##NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25##AK297056|ARHGAP25|9938|Rho GTPase activating protein 25##AK310742|ARHGAP25|9938|Rho GTPase activating protein 25##AK290396|ARHGAP25|9938|Rho GTPase activating protein 25##BC032222|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166276|ARHGAP25|9938|Rho GTPase activating protein 25##NM_014882|ARHGAP25|9938|Rho GTPase activating protein 25##AK311669|ARHGAP25|9938|Rho GTPase activating protein 25##BC039591|ARHGAP25|9938|Rho GTPase activating protein 25##AK297157|ARHGAP25|9938|Rho GTPase activating protein 25##AK298669|ARHGAP25|9938|Rho GTPase activating protein 25##D29642|ARHGAP25|9938|Rho GTPase activating protein 25##BC069080|BMP10|27302|bone morphogenetic protein 10##BC101734|BMP10|27302|bone morphogenetic protein 10##BC105063|BMP10|27302|bone morphogenetic protein 10##AF101441|BMP10|27302|bone morphogenetic protein 10##NM_014482|BMP10|27302|bone morphogenetic protein 10	0.990301	CTCF.p2:-18:0.990
chr7	106842443	106842559	reg1014766.p2	8.754	+	AK295910 NM_001244262 TSC_hg19_v1_chr7_+_106809447 AK298504 BC017069 NM_012257	-33062	+	TSC_hg19_v1_chr7_+_106685154 BC075800 M31158 NM_002736 AK128639 AK291441 AB384742 AM392728 AM392771 AM393258 AM393700 CU687290	-157298	+	TSC_hg19_v1_chr7_+_106505893 NM_002649 X83368	-336572	+	NM_005295 AK122621 AK307393	268001	+	TSC_hg19_v1_chr7_-_107204366 HQ258000 AF058718	361909	-	AK294095 NM_181581 AK297195 BC111774	361921	+	AK295910|HBP1|26959|HMG-box transcription factor 1##NM_001244262|HBP1|26959|HMG-box transcription factor 1##AK298504|HBP1|26959|HMG-box transcription factor 1##BC017069|HBP1|26959|HMG-box transcription factor 1##NM_012257|HBP1|26959|HMG-box transcription factor 1##BC075800|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##M31158|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##NM_002736|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK128639|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK291441|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392728|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392771|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393258|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393700|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##NM_005295|GPR22|2845|G protein-coupled receptor 22##AK122621|GPR22|2845|G protein-coupled receptor 22##AK307393|GPR22|2845|G protein-coupled receptor 22##HQ258000|COG5|10466|component of oligomeric golgi complex 5##AF058718|COG5|10466|component of oligomeric golgi complex 5##AK294095|DUS4L|11062|dihydrouridine synthase 4-like (S. cerevisiae)##NM_181581|DUS4L|11062|dihydrouridine synthase 4-like (S. cerevisiae)##AK297195|DUS4L|11062|dihydrouridine synthase 4-like (S. cerevisiae)##BC111774|DUS4L|11062|dihydrouridine synthase 4-like (S. cerevisiae)	0.728368	CTCF.p2:-4:0.728
chrX	54813512	54813638	reg1016047.p1	8.754	+	TSC_hg19_v1_chrX_+_54556746 BC003603 BC011720	-256834	+	TSC_hg19_v1_chrX_+_54556670 AK001475 NM_001184819 NM_019067	-256915	+	TSC_hg19_v1_chrX_-_54522668 AK299635 AK226117 NM_004463 U11690	-290979	-	AY358170 NM_198510	11097	-	TSC_hg19_v1_chrX_+_54834177 NM_177433 AK297910 AK092463 AX747558 AF126181 AF128527 AF128528 AK301821 U92544 BC091503	20581	+	TSC_hg19_v1_chrX_+_54834810 NM_014599 AK098645 BC000304 AK301599	21232	+	BC003603|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##BC011720|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##AK001475|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##NM_001184819|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##NM_019067|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##AK299635|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##AK226117|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##NM_004463|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##U11690|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##AY358170|ITIH6|347365|inter-alpha-trypsin inhibitor heavy chain family, member 6##NM_198510|ITIH6|347365|inter-alpha-trypsin inhibitor heavy chain family, member 6##NM_177433|MAGED2|10916|melanoma antigen family D, 2##AK297910|MAGED2|10916|melanoma antigen family D, 2##AK092463|MAGED2|10916|melanoma antigen family D, 2##AF126181|MAGED2|10916|melanoma antigen family D, 2##AF128527|MAGED2|10916|melanoma antigen family D, 2##AF128528|MAGED2|10916|melanoma antigen family D, 2##AK301821|MAGED2|10916|melanoma antigen family D, 2##U92544|MAGED2|10916|melanoma antigen family D, 2##BC091503|MAGED2|10916|melanoma antigen family D, 2##NM_014599|MAGED2|10916|melanoma antigen family D, 2##AK098645|MAGED2|10916|melanoma antigen family D, 2##BC000304|MAGED2|10916|melanoma antigen family D, 2##AK301599|MAGED2|10916|melanoma antigen family D, 2	0.999867	CTCF.p2:28:1.000
chr10	32125872	32125992	reg1015049.p1	8.753	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-515843	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-517799	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-517975	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	91792	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	91853	-	TSC_hg19_v1_chr10_-_32344938 AB462413	219000	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.877602	CTCF.p2:-1:0.878
chr1	43703907	43704018	reg1014539.p2	8.753	+	TSC_hg19_v1_chr1_-_43637988 AK299476 AK295006 NM_006824 AB590504 NM_001159936	-65858	-	NM_001167965 NM_001195831 NM_152498 AK056562 TSC_hg19_v1_chr1_+_43638044 BC117280 BC117306 BC143804	-65916	+	TSC_hg19_v1_chr1_-_43637958 AK223455	-66000	-	NM_144626 BC072393	31717	+	TSC_hg19_v1_chr1_-_43736601 BC073924	32641	-	BC041633 NM_182517 NM_001164829	47300	-	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2##AK295006|EBNA1BP2|10969|EBNA1 binding protein 2##NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2##NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2##NM_001167965|WDR65|149465|WD repeat domain 65##NM_001195831|WDR65|149465|WD repeat domain 65##NM_152498|WDR65|149465|WD repeat domain 65##AK056562|WDR65|149465|WD repeat domain 65##BC117280|WDR65|149465|WD repeat domain 65##BC117306|WDR65|149465|WD repeat domain 65##BC143804|WDR65|149465|WD repeat domain 65##AK223455|EBNA1BP2|10969|EBNA1 binding protein 2##NM_144626|TMEM125|128218|transmembrane protein 125##BC072393|TMEM125|128218|transmembrane protein 125##BC073924|EBNA1BP2|10969|EBNA1 binding protein 2##BC041633|C1orf210|149466|chromosome 1 open reading frame 210##NM_182517|C1orf210|149466|chromosome 1 open reading frame 210##NM_001164829|C1orf210|149466|chromosome 1 open reading frame 210	0.174211	
chr15	29268007	29268139	reg1014682.p1	8.753	+	NM_001130414 NM_005503 AF047348 BC082986	-54224	+	TSC_hg19_v1_chr15_+_29077475 BC018626	-190591	+	TSC_hg19_v1_chr15_+_29033278 AK302529	-234750	+	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	293897	-	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	293956	-	NM_015307	594853	-	NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1	0.979669	CTCF.p2:-3:0.980
chr11	11229112	11229260	reg1017126.p1	8.752	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-349400	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-349668	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-398389	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	414392	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	633830	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	634305	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.911483	CTCF.p2:38:0.911
chr11	128646502	128646638	reg1016732.p1	8.752	+	TSC_hg19_v1_chr11_+_128564132 AB385119 AY029368 CU674822 DQ892582 DQ896858	-82428	+	TSC_hg19_v1_chr11_+_128563997 X67001 S45205 BC010115 BC001670	-82515	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	-82590	+	BC136360 BC136361 BC074752 NM_000220 U12541 AK314267 AK290797	65808	-	U12544 U12545 AK308032 U12543 U03884 AK308033 BC063109 NM_153764 NM_153765 NM_153766 NM_153767 U12542	90629	-	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	114770	+	AY029368|FLI1|2313|Friend leukemia virus integration 1##DQ892582|FLI1|2313|Friend leukemia virus integration 1##DQ896858|FLI1|2313|Friend leukemia virus integration 1##X67001|FLI1|2313|Friend leukemia virus integration 1##S45205|FLI1|2313|Friend leukemia virus integration 1##BC010115|FLI1|2313|Friend leukemia virus integration 1##BC001670|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1##BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5	0.994394	CTCF.p2:-2:0.994
chr14	77413563	77413700	reg1013737.p1	8.752	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-120836	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-134369	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-134421	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	81053	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	81429	-	AK124327 TSC_hg19_v1_chr14_-_77542533	128902	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.0	
chr2	27392830	27392948	reg1014815.p1	8.752	+	TSC_hg19_v1_chr2_+_27371895 BC137191 BC137192 BC144525 NM_175769	-20988	+	BC045671 NM_178553	-30585	-	TSC_hg19_v1_chr2_-_27357519 BC041032 NM_013388	-35342	-	AK314545 TSC_hg19_v1_chr2_-_27434795 AF442150	41848	-	TSC_hg19_v1_chr2_+_27434908 NM_080592	42003	+	AK027855 AF069307 AF442149 AF288781 TSC_hg19_v1_chr2_-_27435166 NM_021095	42206	-	BC137191|TCF23|150921|transcription factor 23##BC137192|TCF23|150921|transcription factor 23##BC144525|TCF23|150921|transcription factor 23##NM_175769|TCF23|150921|transcription factor 23##BC045671|C2orf53|339779|chromosome 2 open reading frame 53##NM_178553|C2orf53|339779|chromosome 2 open reading frame 53##BC041032|PREB|10113|prolactin regulatory element binding##NM_013388|PREB|10113|prolactin regulatory element binding##AK314545|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6##AF442150|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6##NM_080592|C2orf28|51374|chromosome 2 open reading frame 28##AK027855|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6##AF069307|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6##AF442149|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6##AF288781|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6##NM_021095|SLC5A6|8884|solute carrier family 5 (sodium-dependent vitamin transporter), member 6	0.642528	CTCF.p2:8:0.643
chr4	156874351	156874494	reg1013252.p1	8.752	+	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	-49545	+	AB528059 AJ252011 NM_017419	-87022	-	TSC_hg19_v1_chr4_+_156680603 AK299916	-193816	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	626	-	AB590688 BC051876 BC094746 AF260738 AK300480 AF244813 AK313817 BC041783 BC065490 TSC_hg19_v1_chr4_-_157892334 AM922296 AB033831	1017795	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	1018056	-	NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##AK299916|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O##BC051876|PDGFC|56034|platelet derived growth factor C##BC094746|PDGFC|56034|platelet derived growth factor C##AF260738|PDGFC|56034|platelet derived growth factor C##AK300480|PDGFC|56034|platelet derived growth factor C##AF244813|PDGFC|56034|platelet derived growth factor C##AK313817|PDGFC|56034|platelet derived growth factor C##BC041783|PDGFC|56034|platelet derived growth factor C##AM922296|PDGFC|56034|platelet derived growth factor C##AB033831|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C	0.090244	
chr5	55560388	55560520	reg1014426.p1	8.752	+	AK123389 NM_024669	-31269	-	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-269691	-	NM_001242636 NM_001242639	-411305	+	NM_005921	550445	+	TSC_hg19_v1_chr5_+_56111375 AK307828	550910	+	TSC_hg19_v1_chr5_+_56111395 AF042838	550964	+	AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.231149	CTCF.p2:-27:0.231
chr6	134432354	134432476	reg1014940.p1	8.752	+	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	-58712	-	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	-158070	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	-159051	+	CU674630 Y10032 AF153609 BC001263 FM205710 TSC_hg19_v1_chr6_-_134496003 AK098509 AK295422 BX649005	63559	-	TSC_hg19_v1_chr6_-_134496010 NM_005627	63604	-	FM205707 TSC_hg19_v1_chr6_-_134496850	64446	-	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1##Y10032|SGK1|6446|serum/glucocorticoid regulated kinase 1##AF153609|SGK1|6446|serum/glucocorticoid regulated kinase 1##BC001263|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205710|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK098509|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK295422|SGK1|6446|serum/glucocorticoid regulated kinase 1##BX649005|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_005627|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205707|SGK1|6446|serum/glucocorticoid regulated kinase 1	0.988637	CTCF.p2:-31:0.974
chr6	32982676	32982788	reg1013391.p1	8.751	+	AK301404 TSC_hg19_v1_chr6_-_32977369 M38056 AK290714 M31525 NM_002119	-5363	-	CU680544 DQ891048 DQ894226 AY947479 AY947480 AY947481 AY947482 BC013183 M26039 TSC_hg19_v1_chr6_-_32977339 AK310153 AK313551	-5406	-	BX647233 NM_001199456	-41872	+	X00457 AB590198 CU679537 DQ893463 DQ896324 AB209058 AK292709 TSC_hg19_v1_chr6_-_33041427 BC009956 M27487 NM_033554	58636	-	NM_002121 AK291986 AK303153 TSC_hg19_v1_chr6_+_33043767 AK301322 J03041 X01426 M83664 AK313305 BC013184 AY831401 AY831402 AY831403 AY804132 AY804142 X03067 AY804140 AY804134 AY804135 AY804137 AY804138 AY804139 AY804143 BC007963 BC015000 AB208978 AY804141 M28200 DQ284441 AY804133 AY804136 AB529034 DQ891050 DQ894229 CU680546 AY656678 AY656679 AY656680 AY831404 BT019780 GQ891549 M28202 M21886	61071	+	NM_001242524 NM_001242525	65822	-	AK301404|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##M38056|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AK290714|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##M31525|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##NM_002119|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##DQ891048|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##DQ894226|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AY947479|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AY947480|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AY947481|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AY947482|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##BC013183|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##M26039|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AK310153|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AK313551|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##BX647233|BRD2|6046|bromodomain containing 2##NM_001199456|BRD2|6046|bromodomain containing 2##X00457|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ893463|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ896324|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AB209058|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AK292709|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##BC009956|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##M27487|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_033554|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_002121|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK291986|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK303153|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK301322|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##J03041|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X01426|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M83664|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK313305|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC013184|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831401|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831402|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831403|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804132|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804142|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X03067|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804140|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804134|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804135|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804137|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804138|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804139|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804143|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC007963|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC015000|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AB208978|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804141|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M28200|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ284441|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804133|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804136|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ891050|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ894229|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656678|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656679|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656680|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831404|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BT019780|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##GQ891549|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M28202|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M21886|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##NM_001242524|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_001242525|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1	0.982461	CTCF.p2:-10:0.982
chr20	31664719	31664836	reg1014966.p2	8.750	+	BC113398 BC113400 HQ258440 AF549189 NM_182658	-21595	+	AB463425 AF465767 BC113122 NM_174897	-45326	+	TSC_hg19_v1_chr20_+_31595513 BC034415	-69256	+	NM_182519	4540	+	AK291854 BC065726 NM_080574	91143	+	BC041904 NM_001042439 NM_178466 BC066354	140360	+	BC113398|BPIFB3|359710|BPI fold containing family B, member 3##BC113400|BPIFB3|359710|BPI fold containing family B, member 3##HQ258440|BPIFB3|359710|BPI fold containing family B, member 3##AF549189|BPIFB3|359710|BPI fold containing family B, member 3##NM_182658|BPIFB3|359710|BPI fold containing family B, member 3##AF465767|BPIFB6|128859|BPI fold containing family B, member 6##BC113122|BPIFB6|128859|BPI fold containing family B, member 6##NM_174897|BPIFB6|128859|BPI fold containing family B, member 6##BC034415|BPIFB2|80341|BPI fold containing family B, member 2##NM_182519|BPIFB4|149954|BPI fold containing family B, member 4##AK291854|BPIFA2|140683|BPI fold containing family A, member 2##BC065726|BPIFA2|140683|BPI fold containing family A, member 2##NM_080574|BPIFA2|140683|BPI fold containing family A, member 2##BC041904|BPIFA3|128861|BPI fold containing family A, member 3##NM_001042439|BPIFA3|128861|BPI fold containing family A, member 3##NM_178466|BPIFA3|128861|BPI fold containing family A, member 3##BC066354|BPIFA3|128861|BPI fold containing family A, member 3	0.183697	
chr5	68630725	68630819	reg1011413.p1	8.750	+	AB024692 BC108715 BC113749 NM_176816	-14418	-	AK026509 TSC_hg19_v1_chr5_+_68530769 X77303 X77743 BC000834 AB385525 AM392563 AM392604 AM392628 AM393110 CU674418 CU675099	-100003	+	TSC_hg19_v1_chr5_+_68530713 BC005298 L20320 X79193	-100056	+	AL122068 NM_133343	34351	+	TSC_hg19_v1_chr5_-_68665348 EU831966 EU832059 U21858 BC007349 BC007426 BC003400 AJ878880 AJ878881 AF151895 NM_003187 NM_016283	34590	-	AK292487 TSC_hg19_v1_chr5_+_68665644 AF126424 NM_133338 NM_133342 NM_133344 BC018110 AF017748	34840	+	AB024692|CCDC125|202243|coiled-coil domain containing 125##BC108715|CCDC125|202243|coiled-coil domain containing 125##BC113749|CCDC125|202243|coiled-coil domain containing 125##NM_176816|CCDC125|202243|coiled-coil domain containing 125##AK026509|CDK7|1022|cyclin-dependent kinase 7##X77303|CDK7|1022|cyclin-dependent kinase 7##X77743|CDK7|1022|cyclin-dependent kinase 7##BC000834|CDK7|1022|cyclin-dependent kinase 7##AM392563|CDK7|1022|cyclin-dependent kinase 7##AM392604|CDK7|1022|cyclin-dependent kinase 7##AM392628|CDK7|1022|cyclin-dependent kinase 7##AM393110|CDK7|1022|cyclin-dependent kinase 7##BC005298|CDK7|1022|cyclin-dependent kinase 7##L20320|CDK7|1022|cyclin-dependent kinase 7##X79193|CDK7|1022|cyclin-dependent kinase 7##AL122068|RAD17|5884|RAD17 homolog (S. pombe)##NM_133343|RAD17|5884|RAD17 homolog (S. pombe)##EU831966|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##EU832059|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##U21858|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##BC007349|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##BC007426|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##BC003400|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##AJ878880|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##AJ878881|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##AF151895|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##NM_003187|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##NM_016283|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##AK292487|RAD17|5884|RAD17 homolog (S. pombe)##AF126424|RAD17|5884|RAD17 homolog (S. pombe)##NM_133338|RAD17|5884|RAD17 homolog (S. pombe)##NM_133342|RAD17|5884|RAD17 homolog (S. pombe)##NM_133344|RAD17|5884|RAD17 homolog (S. pombe)##BC018110|RAD17|5884|RAD17 homolog (S. pombe)##AF017748|RAD17|5884|RAD17 homolog (S. pombe)	0.988809	CTCF.p2:2:0.962
chr16	3146002	3146130	reg1015164.p1	8.749	+	BC114452 AK027455 NM_032805	-3217	-	BC105602 TSC_hg19_v1_chr16_+_3115641 BC018782 NM_001012632 M59807 NM_001012636 AB590933 EU339107 JN546102	-30340	+	AK296143 AK310053 TSC_hg19_v1_chr16_+_3115639	-30427	+	TSC_hg19_v1_chr16_-_3149286 AK074736	3216	-	TSC_hg19_v1_chr16_+_3162586 NM_001042428 NM_003456 AK313009 AF060865 BC002810	16529	+	TSC_hg19_v1_chr16_-_3184862 AF098968	38805	-	BC114452|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AK027455|ZSCAN10|84891|zinc finger and SCAN domain containing 10##NM_032805|ZSCAN10|84891|zinc finger and SCAN domain containing 10##BC105602|IL32|9235|interleukin 32##BC018782|IL32|9235|interleukin 32##NM_001012632|IL32|9235|interleukin 32##M59807|IL32|9235|interleukin 32##NM_001012636|IL32|9235|interleukin 32##EU339107|IL32|9235|interleukin 32##AK296143|IL32|9235|interleukin 32##AK310053|IL32|9235|interleukin 32##AK074736|ZSCAN10|84891|zinc finger and SCAN domain containing 10##NM_001042428|ZNF205|7755|zinc finger protein 205##NM_003456|ZNF205|7755|zinc finger protein 205##AK313009|ZNF205|7755|zinc finger protein 205##AF060865|ZNF205|7755|zinc finger protein 205##BC002810|ZNF205|7755|zinc finger protein 205	0.989707	CTCF.p2:-25:0.990
chr10	102974554	102974730	reg1015983.p1	8.748	+	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-83464	+	BC019674 NM_001085398	-83740	-	TSC_hg19_v1_chr10_+_102821745 BC007758 AY359087 AK225949 AK172862	-152983	+	BC136321 BC069156 NM_006562 X90828	14060	-	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	139230	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	373287	-	BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##BC007758|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AY359087|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK225949|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172862|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda	0.959713	CTCF.p2:3:0.960
chr12	25308146	25308277	reg1015494.p2	8.748	+	TSC_hg19_v1_chr12_+_25205520 BC029391 AK303103 AK303256 BC126417 BC144164 BC144165 BC144170	-102631	+	NM_001204126 NM_001204127 NM_006152	-103031	+	BC035880 NM_001101339 BC046192 BC062789	-157799	-	BC028415 AK297998 AK302235 AK301763 AK093102 AX747924 BC031047 BC047415 BC057795 NM_001082972 NM_001082973 NM_001204101 NM_001204102 NM_018272 AK304602	39852	-	TSC_hg19_v1_chr12_+_25348156 AK057730 NM_001001660	39940	+	AK094491 TSC_hg19_v1_chr12_+_25348215 BC100276 BC071769	39995	+	BC029391|LRMP|4033|lymphoid-restricted membrane protein##AK303103|LRMP|4033|lymphoid-restricted membrane protein##AK303256|LRMP|4033|lymphoid-restricted membrane protein##BC126417|LRMP|4033|lymphoid-restricted membrane protein##BC144164|LRMP|4033|lymphoid-restricted membrane protein##BC144165|LRMP|4033|lymphoid-restricted membrane protein##BC144170|LRMP|4033|lymphoid-restricted membrane protein##NM_001204126|LRMP|4033|lymphoid-restricted membrane protein##NM_001204127|LRMP|4033|lymphoid-restricted membrane protein##NM_006152|LRMP|4033|lymphoid-restricted membrane protein##BC035880|C12orf77|196415|chromosome 12 open reading frame 77##NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77##BC046192|C12orf77|196415|chromosome 12 open reading frame 77##BC062789|C12orf77|196415|chromosome 12 open reading frame 77##BC028415|CASC1|55259|cancer susceptibility candidate 1##AK297998|CASC1|55259|cancer susceptibility candidate 1##AK302235|CASC1|55259|cancer susceptibility candidate 1##AK301763|CASC1|55259|cancer susceptibility candidate 1##AK093102|CASC1|55259|cancer susceptibility candidate 1##BC031047|CASC1|55259|cancer susceptibility candidate 1##BC047415|CASC1|55259|cancer susceptibility candidate 1##BC057795|CASC1|55259|cancer susceptibility candidate 1##NM_001082972|CASC1|55259|cancer susceptibility candidate 1##NM_001082973|CASC1|55259|cancer susceptibility candidate 1##NM_001204101|CASC1|55259|cancer susceptibility candidate 1##NM_001204102|CASC1|55259|cancer susceptibility candidate 1##NM_018272|CASC1|55259|cancer susceptibility candidate 1##AK304602|CASC1|55259|cancer susceptibility candidate 1##AK057730|LYRM5|144363|LYR motif containing 5##NM_001001660|LYRM5|144363|LYR motif containing 5##BC100276|LYRM5|144363|LYR motif containing 5##BC071769|LYRM5|144363|LYR motif containing 5	0.974396	CTCF.p2:-11:0.974
chr12	44711469	44711584	reg1015503.p1	8.748	+	TSC_hg19_v1_chr12_+_44229883 BC042192 BC060798 AK057287 BC030284 AL136855 NM_032256	-481620	+	AK127868 BT019691 CR541736 CR541761 AB209302 AB384914 TSC_hg19_v1_chr12_-_44200120 AK291223 BC022491 BC022344 U02680 BC068548 EU832120 EU832214 AK297206 BC043148 NM_001242397 NM_002822	-511414	-	TSC_hg19_v1_chr12_+_44152777 BC013316 AY340962 AY340963 AY340964 AY340965 AY340966 AY340967 AF155118 AK000528	-558747	+	D89629 AK315960 AK299277 NM_001145109	557865	-	BC020544 TSC_hg19_v1_chr12_-_45269991	558451	-	TSC_hg19_v1_chr12_-_45270099 AK056082 AK297521 AK309825 D83018	558579	-	BC042192|TMEM117|84216|transmembrane protein 117##BC060798|TMEM117|84216|transmembrane protein 117##AK057287|TMEM117|84216|transmembrane protein 117##BC030284|TMEM117|84216|transmembrane protein 117##AL136855|TMEM117|84216|transmembrane protein 117##NM_032256|TMEM117|84216|transmembrane protein 117##AK127868|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BT019691|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541736|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541761|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AB209302|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK291223|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022491|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022344|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##U02680|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC068548|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832120|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832214|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK297206|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC043148|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_001242397|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_002822|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC013316|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340962|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340963|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340964|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340965|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340966|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340967|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AF155118|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK000528|IRAK4|51135|interleukin-1 receptor-associated kinase 4##D89629|NELL2|4753|NEL-like 2 (chicken)##AK315960|NELL2|4753|NEL-like 2 (chicken)##AK299277|NELL2|4753|NEL-like 2 (chicken)##NM_001145109|NELL2|4753|NEL-like 2 (chicken)##BC020544|NELL2|4753|NEL-like 2 (chicken)##AK056082|NELL2|4753|NEL-like 2 (chicken)##AK297521|NELL2|4753|NEL-like 2 (chicken)##AK309825|NELL2|4753|NEL-like 2 (chicken)##D83018|NELL2|4753|NEL-like 2 (chicken)	0.97965	CTCF.p2:-12:0.980
chr19	4186517	4186642	reg1015763.p1	8.748	+	NM_133475	-3229	+	TSC_hg19_v1_chr19_-_4182561 DQ896358 EU176413 AB528632 CR457200 CU678868 BC005026 BC000090 BC004218 AK299420 BC028220 AK293348 AK315048 AK301247 AK074810 AK225567 AF233396 NM_001193285 NM_016539	-4034	-	TSC_hg19_v1_chr19_+_4153636 AK313099 AB050902 AK172839 NM_032607 AB073612 BC101504 BC143609 BC143610 BC101508 EU446882	-32912	+	BC015364 L08187 NM_005755 BC046112 AB528398 DQ891589 EU176581 CU677281	42941	+	TSC_hg19_v1_chr19_+_4247086 AK001236 BC000561 AK023988 NM_018074 AF091080	60511	+	AK056268 NM_020209	92018	+	NM_133475|ANKRD24|170961|ankyrin repeat domain 24##DQ896358|SIRT6|51548|sirtuin 6##EU176413|SIRT6|51548|sirtuin 6##CR457200|SIRT6|51548|sirtuin 6##BC005026|SIRT6|51548|sirtuin 6##BC004218|SIRT6|51548|sirtuin 6##AK299420|SIRT6|51548|sirtuin 6##BC028220|SIRT6|51548|sirtuin 6##AK293348|SIRT6|51548|sirtuin 6##AK315048|SIRT6|51548|sirtuin 6##AK301247|SIRT6|51548|sirtuin 6##AK074810|SIRT6|51548|sirtuin 6##AK225567|SIRT6|51548|sirtuin 6##AF233396|SIRT6|51548|sirtuin 6##NM_001193285|SIRT6|51548|sirtuin 6##NM_016539|SIRT6|51548|sirtuin 6##AK313099|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB050902|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AK172839|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##NM_032607|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB073612|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101504|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143609|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143610|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101508|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##EU446882|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC015364|EBI3|10148|Epstein-Barr virus induced 3##L08187|EBI3|10148|Epstein-Barr virus induced 3##NM_005755|EBI3|10148|Epstein-Barr virus induced 3##BC046112|EBI3|10148|Epstein-Barr virus induced 3##DQ891589|EBI3|10148|Epstein-Barr virus induced 3##EU176581|EBI3|10148|Epstein-Barr virus induced 3##AK001236|CCDC94|55702|coiled-coil domain containing 94##BC000561|CCDC94|55702|coiled-coil domain containing 94##AK023988|CCDC94|55702|coiled-coil domain containing 94##NM_018074|CCDC94|55702|coiled-coil domain containing 94##AF091080|CCDC94|55702|coiled-coil domain containing 94##AK056268|SHD|56961|Src homology 2 domain containing transforming protein D##NM_020209|SHD|56961|Src homology 2 domain containing transforming protein D	0.824185	CTCF.p2:6:0.824
chr3	111856095	111856213	reg1013089.p4	8.748	+	CU688884 BC030506 AY212246 AK313368 AK128276 AF521911 NM_001190259 NM_001190260 NM_152785	-4095	-	TSC_hg19_v1_chr3_+_111805267 AK303588 NM_001171747 NM_024616 AY830714 AK026839 BC017064 AK298076	-50926	+	AK131211 NM_001042575 BC117322	-97646	+	BC044801 NM_183061 AK128084	156934	-	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	195804	+	AL832529 AK129797 AK293399 BC031103 TSC_hg19_v1_chr3_+_112052024 AK074972	195870	+	BC030506|GCET2|257144|germinal center expressed transcript 2##AY212246|GCET2|257144|germinal center expressed transcript 2##AK313368|GCET2|257144|germinal center expressed transcript 2##AF521911|GCET2|257144|germinal center expressed transcript 2##NM_001190259|GCET2|257144|germinal center expressed transcript 2##NM_001190260|GCET2|257144|germinal center expressed transcript 2##NM_152785|GCET2|257144|germinal center expressed transcript 2##AK303588|C3orf52|79669|chromosome 3 open reading frame 52##NM_001171747|C3orf52|79669|chromosome 3 open reading frame 52##NM_024616|C3orf52|79669|chromosome 3 open reading frame 52##AY830714|C3orf52|79669|chromosome 3 open reading frame 52##AK026839|C3orf52|79669|chromosome 3 open reading frame 52##BC017064|C3orf52|79669|chromosome 3 open reading frame 52##AK298076|C3orf52|79669|chromosome 3 open reading frame 52##AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7##BC044801|SLC9A10|285335|solute carrier family 9, member 10##NM_183061|SLC9A10|285335|solute carrier family 9, member 10##AK128084|SLC9A10|285335|solute carrier family 9, member 10##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule##AL832529|CD200|4345|CD200 molecule##AK129797|CD200|4345|CD200 molecule##AK293399|CD200|4345|CD200 molecule##BC031103|CD200|4345|CD200 molecule##AK074972|CD200|4345|CD200 molecule	0.09688	
chr2	214116405	214116538	reg1015891.p1	8.747	+	BC028936 NM_001079526	-100139	-	AK301503 AF130863 NM_016260	-101416	-	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	-713156	-	AK124960 NM_001242575	32457	-	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	32686	+	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	1159989	+	BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451##BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	0.996375	CTCF.p2:-18:0.996
chr3	148661465	148661611	reg1017223.p1	8.747	+	NM_001870 AK313628 BC012613 DQ892805 DQ896052 CU680374 M27717	-78470	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	-115940	+	NM_032049	-213572	+	TSC_hg19_v1_chr3_+_148709140 NM_001184720 NM_001184721 NM_004130	47629	+	TSC_hg19_v1_chr3_+_148709326 AK299962 BC000033 X79537 AK312283 AF087942 U44131	47797	+	AB209052 EU446704 TSC_hg19_v1_chr3_-_148804298 AK291231 L34673 BC015498 BC005260 BC044659 BC014326 BC030976 NM_003071 NM_139048	142724	-	NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)##AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)##BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)##DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)##DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)##M27717|CPA3|1359|carboxypeptidase A3 (mast cell)##NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_001184720|GYG1|2992|glycogenin 1##NM_001184721|GYG1|2992|glycogenin 1##NM_004130|GYG1|2992|glycogenin 1##AK299962|GYG1|2992|glycogenin 1##BC000033|GYG1|2992|glycogenin 1##X79537|GYG1|2992|glycogenin 1##AK312283|GYG1|2992|glycogenin 1##AF087942|GYG1|2992|glycogenin 1##U44131|GYG1|2992|glycogenin 1##AB209052|HLTF|6596|helicase-like transcription factor##EU446704|HLTF|6596|helicase-like transcription factor##AK291231|HLTF|6596|helicase-like transcription factor##L34673|HLTF|6596|helicase-like transcription factor##BC015498|HLTF|6596|helicase-like transcription factor##BC005260|HLTF|6596|helicase-like transcription factor##BC044659|HLTF|6596|helicase-like transcription factor##BC014326|HLTF|6596|helicase-like transcription factor##BC030976|HLTF|6596|helicase-like transcription factor##NM_003071|HLTF|6596|helicase-like transcription factor##NM_139048|HLTF|6596|helicase-like transcription factor	0.999457	CTCF.p2:2:0.999
chr7	76243239	76243358	reg1013813.p1	8.747	+	TSC_hg19_v1_chr7_+_76178675 BC078169	-64623	+	TSC_hg19_v1_chr7_+_76178647 BC090058	-64666	+	NM_030570 NM_182684 AK290096 AY233462 BC004304 AK056760 CU678662	-103442	+	TSC_hg19_v1_chr7_-_76256148 BC017101	12905	-	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	13249	-	BC036053 NM_020879 BX649000 AK292491 HM370402	508648	+	BC078169|LOC100133091|100133091|uncharacterized LOC100133091##BC090058|LOC100133091|100133091|uncharacterized LOC100133091##NM_030570|UPK3B|80761|uroplakin 3B##NM_182684|UPK3B|80761|uroplakin 3B##AK290096|UPK3B|80761|uroplakin 3B##AY233462|UPK3B|80761|uroplakin 3B##BC004304|UPK3B|80761|uroplakin 3B##AK056760|UPK3B|80761|uroplakin 3B##BC017101|POMZP3|22932|POM121 and ZP3 fusion##BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146	0.85458	CTCF.p2:25:0.760
chr9	140070030	140070111	reg1023618.p1	8.747	+	DQ355157 BC140911 TSC_hg19_v1_chr9_-_140064504 NM_001013653	-5605	-	TSC_hg19_v1_chr9_-_140063880 EU588721	-6188	-	TSC_hg19_v1_chr9_+_140033607 NM_000832 NM_001185090 NM_001185091 NM_007327 NM_021569 AB208999 D13515 AB208918 L05666 AB590080 L13268	-36292	+	AF191337 DQ890852 DQ894007 BC032503 AK296204 TSC_hg19_v1_chr9_-_140083009	12926	-	TSC_hg19_v1_chr9_-_140083013 AK294601	12945	-	TSC_hg19_v1_chr9_-_140083038 NM_013366	12975	-	DQ355157|LRRC26|389816|leucine rich repeat containing 26##BC140911|LRRC26|389816|leucine rich repeat containing 26##NM_001013653|LRRC26|389816|leucine rich repeat containing 26##NM_000832|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_001185090|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_001185091|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_007327|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_021569|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##AB208999|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##D13515|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##AB208918|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##L05666|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##L13268|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##AF191337|ANAPC2|29882|anaphase promoting complex subunit 2##DQ890852|ANAPC2|29882|anaphase promoting complex subunit 2##DQ894007|ANAPC2|29882|anaphase promoting complex subunit 2##BC032503|ANAPC2|29882|anaphase promoting complex subunit 2##AK296204|ANAPC2|29882|anaphase promoting complex subunit 2##AK294601|ANAPC2|29882|anaphase promoting complex subunit 2##NM_013366|ANAPC2|29882|anaphase promoting complex subunit 2	0.799389	CTCF.p2:-14:0.799
chr3	87309472	87309595	reg1017025.p1	8.746	+	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	-32998	+	BC094780 TSC_hg19_v1_chr3_-_87040272	-269263	-	TSC_hg19_v1_chr3_-_87040249 NM_016206	-269282	-	AB587506 L18781 X72215 X62429 D10216 NM_000306 NM_001122757	16140	-	NM_000866	722192	+	BC052980 TSC_hg19_v1_chr3_-_88108150 AL117392 NM_001008390 NM_003663	798610	-	NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)##L18781|POU1F1|5449|POU class 1 homeobox 1##X72215|POU1F1|5449|POU class 1 homeobox 1##X62429|POU1F1|5449|POU class 1 homeobox 1##D10216|POU1F1|5449|POU class 1 homeobox 1##NM_000306|POU1F1|5449|POU class 1 homeobox 1##NM_001122757|POU1F1|5449|POU class 1 homeobox 1##NM_000866|HTR1F|3355|5-hydroxytryptamine (serotonin) receptor 1F##BC052980|CGGBP1|8545|CGG triplet repeat binding protein 1##AL117392|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_001008390|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_003663|CGGBP1|8545|CGG triplet repeat binding protein 1	0.999629	CTCF.p2:-3:1.000
chr14	106892371	106892478	reg1013277.p1	8.745	+	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 AJ245014 AJ245018 AJ245021 AJ245023 AJ245024 AJ245030 AJ245033 AJ245034 AJ245038 AJ245056 AJ245060 AJ245061 AJ245071 AJ249629 AJ279514 AJ279515 AJ279525 AJ279530 AJ308449 AJ389175 AJ389176 AJ414019 AJ416561 AJ555264 AJ556674 AJ556675 AJ556676 AJ556691 AJ556693 AJ574781 AJ579117 AJ579126 AJ579130 AJ579131 AJ579134 AJ579138 AJ579166 AJ579168 AJ579169 AJ579170 AJ579179 AJ579200 AJ579202 AJ579205 AJ579209 AJ579210 AJ579214 AJ579244 AJ579245 AJ579292 AJ579293 AJ579297 AJ617569 AY165854 AY268372 AY268373 AY300037 AY577300 AY640552 AY670713 AY670734 AY670740 AY670742 AY670747 AY670751 AY670754 AY670758 AY670762 AY670771 AY670774 AY670799 AY670802 AY670805 AY670817 AY670822 AY670823 AY670825 AY670849 AY670850 AY670858 AY670859 AY670865 AY670874 AY670881 AY670894 AY670896 AY670897 AY670902 AY670914 AY670920 AY670922 AY670947 AY670950 AY670955 AY670960 AY670961 AY670970 AY670972 AY670978 AY670980 AY670986 AY670991 AY671017 AY671060 AY671089 AY671090 AY671101 AY671109 AY671112 AY671114 AY671119 AY671124 AY671126 AY671136 AY671137 AY671140 AY671146 AY671264 AY671318 AY671368 AY671369 AY671384 AY671392 AY671418 AY671433 AY671439 AY671482 AY671489 AY671517 AY671524 AY671534 AY671536 AY671545 AY671552 AY671560 AY671562 AY671563 AY671567 AY671572 AY671576 AY671578 AY671582 AY671583 AY671588 AY671598 AY671599 AY671600 AY671602 AY671616 AY671624 AY671626 AY671635 AY671638 AY671661 AY671672 AY671677 AY671681 AY671730 AY671736 AY671744 AY671752 AY671773 AY671774 AY671778 AY671780 AY671786 AY781849 AY885184 AY941931 AY941962 AY941975 AY960198 AY960201 AY971014 AY971044 AY971045 AY971080 AY971086 AY998723 DQ005257 DQ065676 DQ100673 DQ100687 DQ100701 DQ100784 DQ100821 DQ100822 DQ100824 DQ100825 DQ100897 DQ100953 DQ205162 DQ205173 DQ212518 DQ212520 DQ328872 DQ431572 DQ431610 DQ926162 DQ926290 DQ926291 DQ926302 DQ926317 DQ926323 DQ926515 DQ926519 DQ926521 DQ926608 FJ039783 FJ039790 FJ039791 FJ385371 FJ385402 FR820867 FR820868 FR820869 FR820870 FR820871 FR820872 FR820873 FR820875 GU570374 HM152512 HM152521 HQ689769 JN201901 L12190 L43117 U00494 U00566 U00571 U00578 U00581 U64496 U96278 U96280 U96285 U96287 U97243 X84336 X84339 Y08428 Y09249 Y09390 Z18316 Z46285 Z70608 Z70621 Z70622 Z70623 Z70631 Z70632 Z70654 Z70655 Z70656 Z70657 DQ926182 DQ926347 DQ926348 AY944695 DQ535289 DQ535393 DQ535427 DQ535433 DQ535456 EF177973 EF178111 EF178132 FJ385279 AJ579303 X54447 AY392937 X17678 S63731 X54437 Z14197 AY671021 AY670994 AY671000 AY671001 AY671009 AY671012 AY671016 AY671023 AY671031 AY671036 AY671054 AY671142 AY671197 AY671335 AY671182 AF013622 AY671048 AY671052 AY671159 AY671179 AY671239 AY671263 AY671276 AY671279 AY671282 AF013619 AF062204 AF062240 AF247737 AY671165 AY671185 AY671217 AY671297 AY671693 AY671723 AY671725 CU677619 EU937522 L23556 L38425 M99607 U86523 U86524 X65903 X65911 Z14198 Z75364 Z75388 AY671162 X52895 TSC_hg19_v1_chr14_-_106878091 X56158 M97921 AF417843 AK057754 AK057775 AK130529 BC025985 BX640824 AK130609 Z14206 AK126352 AK129514 AK129592 AK129637 AK130589 AK130611 BC016369 BX538077 BX648082 BX648874 Z14195 AK095222 AK303185	-14517	-	AF460708 AF460709 AF460785 AY003807 AY003817 DQ454548 M33859 M33860 DQ454427 DQ454852 DQ454425 DQ454627 DQ454856 GU552743 DQ454416 DQ454458 GQ232904 GU552731 GU552736 AY003787 AF017463 GU552721 GU552724 GU552725 GU552726 GU552727 GU552728 GU552729 GU552730 AY003850 DQ454418 DQ454671 GQ232774 DQ454432 DQ454433 DQ454901 DQ454979 DQ454980 GQ232865 HM995239 JF810276 AY003855 DQ454422 DQ454434 DQ454622 DQ454870 DQ523887 HM116153 HM116169 HM116182 Z30552 Z30557 Z30561 Z30562 Z30573 Z30576 Z30578 Z30580 Z30581 Z30591 Z30599 Z30674 Z30675 Z30677 DQ454531 DQ454860 DQ454903 EU099089 AF004937 AY003796 AY003804 DQ454392 DQ454610 DQ454833 EU620002 FJ840008 FJ840011 FJ840012 FJ840020 FJ840055 FJ874002 FJ874054 FJ874065 FJ874072 FJ874075 FJ874095 HM116113 HM116114 HM116155 HM116159 HM116160 HM116168 HM116177 HM116195 HM116199 HM116226 AF017459 AF017460 EU619988 AJ487490 AY003825 AJ253061 EU350428 DQ454982 X75022 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FJ385351 FJ385378 HM774705 HM774878 AF103173 AY193818 EU146315 EU146358 EU146377 EU146394 U21257 U21267 U21268 HM774736 AJ222555 HM995235 X87438 AJ222547 AJ222548 AJ222549 AJ222550 AJ222552 AJ222556 AJ222557 AJ222558 AJ222559 AJ222560 AJ222561 AJ222562 AJ222563 AJ222564 AJ222565 AJ222566 AJ222567 AJ222568 AJ222569 AJ222570 AJ222571 AJ222573 AJ222574 AJ222575 AJ222576 AJ222577 AJ222578 Z46300 Z46301 Z46302 Z46315 Z46316 Z46317 Z46318 Z46319 Z46320 Z46321 Z46322 Z46323 Z46324 Z46325 Z46326 Z46327 Z46328 Z46329 Z46330 Z46331 Z46332 Z46333 Z46334 Z46335 Z46336 Z46337 Z46338 Z46339 Z49139 AJ244942 AJ579251 X64156 X64159 AB063716 AJ244940 AJ279524 AJ279537 AJ556751 AJ579178 AY268371 DQ523935 DQ523975 DQ523980 DQ523984 DQ523987 DQ523990 DQ524003 DQ524006 DQ524007 DQ524018 DQ524044 DQ524065 DQ524068 DQ524074 DQ524077 AB067135 AB067136 AJ244997 AM233792 AM233793 AM233795 AM233801 DQ926349 DQ926350 L34163 X64235 AJ300804 AY670741 AY670790 AY670791 AY670810 AY670816 HM994959 HM995182 HM995183 HM995184 HM995185 HM995187 HM995189 HM995203 HM995204 HM995205 HM995206 HM995207 HM995211 HM995216 HM995244 HM995246 HM995249 HM995308 HM995310 HM995472 HM995477 HM995479 HM995481 HM995550 HM995553 HM995554 HM995743 HM995982 HM996230 HM996238 HM996535 AB063661 AB063671 AB063674 AB066914 AB066915 AB066916 AB066917 AB066918 AB066919 AB066920 AB066921 AB066923 AB066924 AB067034 AB067035 AB067036 AB067037 AB067038 AB067039 AB067040 AB067041 AB067044 AB067046 AB067049 AB067052 AB067053 AB067054 AB067055 AB067056 AB067057 AB067058 AB067059 AB067060 AB067064 AB067066 AB067067 AB067068 AB067084 AB067085 AB067088 AB067089 AB067090 AB067091 AB067092 AB067093 AB067132 AB067133 AB067134 AB067137 AB067142 AB067143 AB067144 AB067145 AB067146 AB067148 AB067149 AB067151 AB110646 AB363152 AB363153 AB363154 AF021948 AF021957 AF021990 AF021991 AF021997 AF022004 AF022005 AF052527 AF062104 AF062113 AF062231 AF062234 AF107233 AF107239 AF107241 AF174041 AF174049 AF174054 AF174085 AF174086 AF174088 AF245309 AF262072 AF262097 AF262100 AF262125 AF262174 AF372845 AJ239335 AJ239362 AJ239377 AJ244929 AJ244931 AJ244935 AJ244937 AJ244938 AJ244939 AJ244941 AJ244943 AJ244944 AJ244951 AJ244959 AJ244960 AJ244962 AJ244966 AJ244967 AJ244968 AJ244969 AJ244972 AJ244973 AJ244975 AJ244978 AJ244982 AJ244984 AJ244985 AJ244987 AJ244988 AJ244990 AJ244991 AJ244992 AJ244994 AJ245008 AJ245009 AJ245011 AJ245013 AJ245017 AJ245028 AJ245035 AJ245036 AJ245039 AJ245040 AJ245041 AJ245042 AJ245043 AJ245044 AJ245046 AJ245049 AJ245051 AJ245052 AJ245054 AJ245057 AJ245065 AJ245236 AJ245238 AJ249631 AJ279513 AJ279519 AJ279521 AJ279526 AJ279531 AJ279535 AJ556773 AJ574778 AJ579118 AJ579121 AJ579122 AJ579124 AJ579129 AJ579135 AJ579164 AJ579165 AJ579167 AJ579175 AJ579176 AJ579201 AJ579206 AJ579208 AJ579211 AJ579213 AJ579240 AJ579241 AJ579242 AJ579243 AJ579246 AJ579248 AJ579249 AJ579250 AJ579253 AJ579255 AJ579256 AJ579257 AJ579258 AJ579259 AJ579260 AJ579286 AJ579287 AJ579289 AJ579290 AJ579302 AJ579304 AY033257 AY062304 AY553641 AY553646 AY670708 AY670709 AY670710 AY670711 AY670716 AY670717 AY670718 AY670720 AY670721 AY670722 AY670723 AY670724 AY670730 AY670736 AY670738 AY670739 AY670743 AY670749 AY670750 AY670755 AY670757 AY670760 AY670761 AY670763 AY670766 AY670767 AY670768 AY670772 AY670775 AY670777 AY670779 AY670781 AY670782 AY670785 AY670787 AY670789 AY670794 AY670795 AY670796 AY670798 AY670801 AY670803 AY670804 AY670811 AY670813 AY670814 AY670815 AY670824 AY670826 AY670827 AY670828 AY670833 AY670834 AY670835 AY670838 AY670839 AY670840 AY670841 AY670842 AY670843 AY670845 AY670846 AY670851 AY670853 AY670855 AY670856 AY670860 AY670863 AY670864 AY670867 AY670870 AY670871 AY670873 AY670875 AY670878 AY670879 AY670882 AY670883 AY670884 AY670885 AY670890 AY670892 AY670893 AY670898 AY670899 AY670900 AY670903 AY670904 AY670905 AY670907 AY670911 AY670913 AY670916 AY670918 AY670919 AY670924 AY670928 AY670929 AY670931 AY670932 AY670935 AY670940 AY670943 AY670944 AY670946 AY670949 AY670952 AY670953 AY670954 AY670962 AY670965 AY670973 AY670974 AY670975 AY670976 AY670977 AY670981 AY670990 AY671010 AY671015 AY671024 AY671047 AY671065 AY671073 AY671078 AY671079 AY671087 AY671093 AY671094 AY671095 AY671096 AY671097 AY671099 AY671100 AY671103 AY671104 AY671105 AY671106 AY671107 AY671108 AY671110 AY671113 AY671115 AY671117 AY671118 AY671120 AY671121 AY671122 AY671123 AY671125 AY671128 AY671129 AY671132 AY671134 AY671135 AY671139 AY671145 AY671153 AY671155 AY671161 AY671209 AY671240 AY671245 AY671257 AY671274 AY671277 AY671283 AY671313 AY671314 AY671315 AY671316 AY671317 AY671319 AY671321 AY671322 AY671323 AY671328 AY671330 AY671332 AY671341 AY671345 AY671347 AY671348 AY671349 AY671354 AY671364 AY671366 AY671370 AY671371 AY671380 AY671382 AY671383 AY671393 AY671409 AY671413 AY671416 AY671422 AY671424 AY671425 AY671427 AY671428 AY671429 AY671430 AY671434 AY671435 AY671436 AY671438 AY671441 AY671443 AY671444 AY671445 AY671446 AY671447 AY671449 AY671452 AY671453 AY671454 AY671455 AY671461 AY671462 AY671464 AY671468 AY671471 AY671478 AY671480 AY671481 AY671483 AY671486 AY671487 AY671491 AY671492 AY671503 AY671505 AY671507 AY671508 AY671510 AY671511 AY671515 AY671518 AY671519 AY671525 AY671527 AY671528 AY671530 AY671532 AY671535 AY671538 AY671539 AY671540 AY671541 AY671543 AY671544 AY671548 AY671555 AY671556 AY671561 AY671564 AY671565 AY671566 AY671568 AY671573 AY671574 AY671577 AY671579 AY671580 AY671581 AY671585 AY671587 AY671591 AY671593 AY671595 AY671612 AY671614 AY671617 AY671619 AY671620 AY671625 AY671629 AY671630 AY671632 AY671634 AY671637 AY671640 AY671642 AY671644 AY671648 AY671650 AY671651 AY671653 AY671658 AY671659 AY671660 AY671663 AY671668 AY671671 AY671676 AY671682 AY671684 AY671685 AY671688 AY671690 AY671691 AY671694 AY671697 AY671698 AY671699 AY671700 AY671702 AY671704 AY671706 AY671707 AY671708 AY671712 AY671716 AY671718 AY671724 AY671732 AY671733 AY671734 AY671735 AY671737 AY671739 AY671741 AY671746 AY671749 AY671750 AY671751 AY671753 AY671756 AY671763 AY671764 AY671765 AY671766 AY671767 AY671769 AY671771 AY671776 AY671781 AY671784 AY885181 AY941889 AY941914 AY941957 DQ005274 DQ005285 DQ100660 DQ100674 DQ100703 DQ100725 DQ100792 DQ100829 DQ100832 DQ100964 DQ926158 DQ926198 DQ926208 DQ926421 DQ926458 DQ926468 DQ926470 DQ926478 DQ926497 DQ926599 DQ926603 EF544907 EF544958 EF544959 EF544973 FJ208782 FJ492903 FJ492909 FJ492910 GU570373 HM152498 HM152511 HM152516 HQ392880 HQ689741 L12192 L23518 L23934 L25293 M26998 M74468 S64473 S66098 S67110 U00497 U00556 U22391 U71103 U89766 U97246 X56592 X87440 Z35492 Z46269 Z46271 Z46272 Z46273 Z46275 Z46277 Z46279 Z46282 Z46304 Z46305 Z46306 Z46307 Z46308 Z46340 Z46341 Z46342 Z49135 Z49140 Z49141 Z49143 Z70604 Z70605 Z70610 Z70616 Z70617 Z70625 Z70626 Z70627 Z70637 Z70638 Z70639 Z70640 Z70641 Z70642 Z70643 Z70644 Z70650 Z74665 Z74695 AY670806 AY670808 AY957532 AY686937 AY957534 DQ535279 DQ535294 DQ535296 DQ535314 DQ535320 DQ535326 DQ535459 EF178028 EF178136 HM996258 M84508 FJ039792 M84512 X54441 AY671298 AY670999 AY671028 AF283780 AF283781 M74018 M74021 AY670983 AY670985 AY670987 AY670989 AY670992 AY670993 AY670995 AY670997 AY670998 AY671018 AY671025 AY671033 AY671043 AY671307 AY671310 AY671046 AY671049 AY671205 AF283784 AY671151 AY671233 AJ579207 AY670982 AY671003 AY671029 AY671050 AY671156 AY671160 AY671171 AY671177 AY671190 AY671199 AY671201 AY671212 AY671226 AY671232 AY671235 AY671236 AY671250 AY671251 AY671261 AY671262 AY671270 AY671272 AY671278 AY671281 AY671287 AY671308 Z47229 AF062101 AF062146 AF062152 AF062158 AF062173 AF062181 AF062183 AF062187 AF062192 AF062196 AF062217 AF062218 AF062250 AJ579203 AY204755 AY204757 AY204759 AY204761 AY671006 AY671008 AY671061 AY671064 AY671168 AY671175 AY671183 AY671200 AY671207 AY671220 AY671238 AY671258 AY671268 AY671275 AY671289 AY671290 AY671303 AY671305 AY671696 AY671705 AY671713 AY671722 AY671727 AY671728 S59161 X64152 X64153 X65904 Z47228 Z47234 Z47241 Z75362 Z75374 Z75376 Z75379 Z75386 Z75389 Z75392 Z75394 Z75398 CU674902 CU678316 BC002963 BC073767 CU675962 BC017356 BC019235 BC001872 BC006180 BX538126 AK301454 TSC_hg19_v1_chr14_-_106830060 AK126280 AK128649 AK127921 CR933690	-62518	-	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 AF044420 AF044422 AF044425 AF044427 AF044442 AF090355 AF099201 AF174074 AF471431 AJ132850 AJ271549 AJ300787 AJ300793 AJ300798 AJ300803 AJ308463 AJ633622 AJ633623 AY028777 AY033265 AY033266 AY033267 AY530317 AY554176 AY640472 AY640475 AY640477 AY640483 AY640501 AY640511 AY640535 AY640539 AY640541 AY640544 AY640549 AY640550 AY640557 AY640558 AY640561 AY640568 AY640569 AY640573 AY640577 AY685306 AY781859 AY846266 AY846267 AY866744 AY941844 AY941856 AY941857 AY941860 AY941863 AY941865 AY941866 AY941868 AY941892 AY941896 AY941898 AY941901 AY941907 AY941913 AY941935 AY941942 AY941950 AY941953 AY941968 AY941970 AY941982 AY941983 AY941985 AY941986 AY941988 AY941989 AY944708 AY944716 AY971015 AY971027 AY971037 AY971078 AY971081 AY971115 AY971120 AY971130 AY971135 DQ065629 DQ065669 DQ065674 DQ065689 DQ065692 DQ065718 DQ065725 DQ431499 DQ431621 DQ431627 DQ840705 DQ840715 DQ840744 DQ926087 DQ926091 DQ926150 DQ926207 DQ926222 DQ926372 DQ926388 DQ926512 DQ926569 DQ926578 DQ926634 EF177978 EF178004 EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 AY866854 AY882579 AY927661 AY941847 AY941848 AY941861 AY941864 AY941867 AY941869 AY941871 AY941872 AY941874 AY941875 AY941893 AY941894 AY941895 AY941897 AY941904 AY941908 AY941922 AY941932 AY941933 AY941934 AY941944 AY941946 AY941951 AY941954 AY941956 AY941963 AY941964 AY941966 AY941967 AY941969 AY944690 AY971127 D83678 D83681 D83684 D83685 D83694 DQ005284 DQ065696 DQ100659 DQ100685 DQ100775 DQ100819 DQ100846 DQ100857 DQ100907 DQ100930 DQ212508 DQ212509 DQ431475 DQ431476 DQ431501 DQ431573 DQ431575 DQ431576 DQ431580 DQ431582 DQ431606 DQ431607 DQ431622 DQ431628 DQ431633 DQ431634 DQ431637 DQ431642 DQ431643 DQ431646 DQ431653 DQ431658 DQ535263 DQ535266 DQ535268 DQ535293 DQ535308 DQ535373 DQ535382 DQ535397 DQ535424 DQ535426 DQ535429 DQ535437 DQ535439 DQ535440 DQ535461 DQ535466 DQ840703 DQ840706 DQ840712 DQ840713 DQ840745 DQ840782 DQ840813 DQ923052 DQ926032 DQ926064 DQ926133 DQ926340 DQ926374 DQ926384 DQ926552 EF177969 EF177975 EF177991 EF178015 EF178075 EF178091 EF178098 EF178099 EF221755 EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	-101130	-	GQ232933 AY003798 FJ840151 FJ873995 EF407840 AM279492 AM279629 HM774186 AY957513 EF633772 AY062305 DQ524058 AF174122 AY944701 DQ065664 DQ065670 DQ065719 DQ065726 DQ926522 EF178118 EF633803 FJ385316 GU570332 HM995173 HM995251 HM995315 HM995321 HM995523 AB021518 AB021527 AF035043 AF471473 AJ579183 DQ535349 DQ535444 GU570331 GU570333 X95661 Z47231 BC092518 TSC_hg19_v1_chr14_-_106926725 BX647160 AK123783 AK097306 AK097329	34135	-	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	46034	+	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	74876	-	AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF174049|SKAP2|8935|src kinase associated phosphoprotein 2##BC002963|IGHM|3507|immunoglobulin heavy constant mu##BC073767|IGHM|3507|immunoglobulin heavy constant mu##BC017356|IGHM|3507|immunoglobulin heavy constant mu##BC019235|IGHM|3507|immunoglobulin heavy constant mu##BC001872|IGHM|3507|immunoglobulin heavy constant mu##BC006180|IGHM|3507|immunoglobulin heavy constant mu##BX538126|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK126280|IGHD|3495|immunoglobulin heavy constant delta##AK128649|IGHD|3495|immunoglobulin heavy constant delta##AK127921|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.550771	CTCF.p2:-5:0.388
chr14	49928646	49928782	reg1013879.p2	8.745	+	AK309211 NM_001113498	-1784558	-	BC028193 NM_182830	-2116299	-	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	-2807731	-	BC032813 BC035313 L31610 U14973 AK026649 BC015974 NM_001030001 NM_001032 AB055780 AK307833 TSC_hg19_v1_chr14_-_50053095	124379	-	NM_152329 NM_203467 TSC_hg19_v1_chr14_+_50065473 BC030142 BX648029	136746	+	TSC_hg19_v1_chr14_-_50087339 BC003145 BC000741 BC070207 AK311959 AB063609 NM_001001 BC107716	158630	-	AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC032813|RPS29|6235|ribosomal protein S29##BC035313|RPS29|6235|ribosomal protein S29##L31610|RPS29|6235|ribosomal protein S29##U14973|RPS29|6235|ribosomal protein S29##AK026649|RPS29|6235|ribosomal protein S29##BC015974|RPS29|6235|ribosomal protein S29##NM_001030001|RPS29|6235|ribosomal protein S29##NM_001032|RPS29|6235|ribosomal protein S29##AB055780|RPS29|6235|ribosomal protein S29##NM_152329|LRR1|122769|leucine rich repeat protein 1##NM_203467|LRR1|122769|leucine rich repeat protein 1##BC030142|LRR1|122769|leucine rich repeat protein 1##BX648029|LRR1|122769|leucine rich repeat protein 1##BC003145|RPL36AL|6166|ribosomal protein L36a-like##BC000741|RPL36AL|6166|ribosomal protein L36a-like##BC070207|RPL36AL|6166|ribosomal protein L36a-like##AK311959|RPL36AL|6166|ribosomal protein L36a-like##AB063609|RPL36AL|6166|ribosomal protein L36a-like##NM_001001|RPL36AL|6166|ribosomal protein L36a-like##BC107716|RPL36AL|6166|ribosomal protein L36a-like	0.83676	CTCF.p2:-11:0.837
chr12	130498642	130498755	reg1015371.p2	8.744	+	BC114626 BC114936 NM_133448 AB061814	-110487	-	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	-1160611	+	BC043528 TSC_hg19_v1_chr12_+_129337985	-1160714	+	AK056047 TSC_hg19_v1_chr12_-_130646911	148158	-	TSC_hg19_v1_chr12_+_130647008 BC070037 NM_007197	148312	+	NM_001190971 NM_004764	323734	+	BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056047|FLJ31485|440119|uncharacterized LOC440119##BC070037|FZD10|11211|frizzled family receptor 10##NM_007197|FZD10|11211|frizzled family receptor 10##NM_001190971|PIWIL1|9271|piwi-like 1 (Drosophila)##NM_004764|PIWIL1|9271|piwi-like 1 (Drosophila)	0.563884	CTCF.p2:-7:0.564
chr20	19673399	19673513	reg1014035.p1	8.744	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	-480003	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	-480171	+	NM_001242671	-862618	-	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	193687	+	BC128065 NM_018993 TSC_hg19_v1_chr20_+_19870217 AB060339	196771	+	TSC_hg19_v1_chr20_+_19915762 BC034698 AL136924	242293	+	AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2##BC128065|RIN2|54453|Ras and Rab interactor 2##NM_018993|RIN2|54453|Ras and Rab interactor 2##AB060339|RIN2|54453|Ras and Rab interactor 2##BC034698|RIN2|54453|Ras and Rab interactor 2##AL136924|RIN2|54453|Ras and Rab interactor 2	0.997485	CTCF.p2:-12:0.997
chr20	21789816	21789932	reg1013985.p1	8.744	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	-103341	+	TSC_hg19_v1_chr20_+_21686296 NM_006192	-103580	+	NM_002509	-295211	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	775042	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	775201	-	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	776228	-	BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1##NM_006192|PAX1|5075|paired box 1##NM_002509|NKX2-2|4821|NK2 homeobox 2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2	0.999087	CTCF.p2:0:0.999
chr3	107140148	107140275	reg1014780.p1	8.744	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-43901	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-180619	+	TSC_hg19_v1_chr3_-_106959482 BC036229	-180732	-	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	101638	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	669662	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	801081	-	AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)	0.976152	CTCF.p2:25:0.976
chr4	116011792	116011897	reg1013823.p1	8.744	+	NM_003360 U30930	-468322	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-492261	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-1111005	-	BC113075 BC012326 AK289670 AB036429 NM_022569	23137	-	AK074617 BC030831 NM_152402	1994889	-	TSC_hg19_v1_chr4_+_118954764 AY358852	2942927	+	NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.968654	CTCF.p2:-5:0.969
chr1	198434811	198434950	reg1014034.p2	8.743	+	TSC_hg19_v1_chr1_+_198126162 NM_133494 AK313411	-308826	+	TSC_hg19_v1_chr1_+_197886502 AY273889 NM_020204	-548373	+	AJ296272 NM_001014434 AJ277915	-553241	+	NM_133262 NM_133326	75194	-	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	173293	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	173345	+	NM_133494|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##AK313411|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##AY273889|LHX9|56956|LIM homeobox 9##NM_020204|LHX9|56956|LIM homeobox 9##AJ296272|LHX9|56956|LIM homeobox 9##NM_001014434|LHX9|56956|LIM homeobox 9##AJ277915|LHX9|56956|LIM homeobox 9##NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	0.701891	CTCF.p2:4:0.702
chr16	75555419	75555511	reg1013517.p1	8.743	+	TSC_hg19_v1_chr16_-_75529303 AK311527 AK093904	-26168	-	TSC_hg19_v1_chr16_-_75529279 AF219990	-26186	-	AF280086 NM_021615	-26540	-	AF246718 NM_024533	13602	-	CU679755 TSC_hg19_v1_chr16_-_75590137 AK096650 NM_001077416 BC010609 AK307263 AK025820 BC063677 AY358612 AK290483 NM_001077418 NM_001077419	34701	-	AB030710 NM_007285 TSC_hg19_v1_chr16_+_75600274 BC029601	44796	+	AF280086|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6##NM_021615|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6##AF246718|CHST5|23563|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5##NM_024533|CHST5|23563|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5##AK096650|TMEM231|79583|transmembrane protein 231##NM_001077416|TMEM231|79583|transmembrane protein 231##BC010609|TMEM231|79583|transmembrane protein 231##AK307263|TMEM231|79583|transmembrane protein 231##AK025820|TMEM231|79583|transmembrane protein 231##BC063677|TMEM231|79583|transmembrane protein 231##AY358612|TMEM231|79583|transmembrane protein 231##AK290483|TMEM231|79583|transmembrane protein 231##NM_001077418|TMEM231|79583|transmembrane protein 231##NM_001077419|TMEM231|79583|transmembrane protein 231##AB030710|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##NM_007285|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC029601|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2	0.117266	
chr11	112150736	112150854	reg1009872.p1	8.742	+	AY364435 NM_001145024	-19213	-	TSC_hg19_v1_chr11_+_112097100 NM_000317 BC018029 D17400 AK310768 BC009686 AK307133 M97655 AM392676 AM393300 AM393668 DQ890961 DQ894133	-53668	+	NM_001037290 AK027801 AK297853 AB096252	-103690	+	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 TSC_hg19_v1_chr11_+_112831996 AK314589	681192	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	681336	+	X16841 TSC_hg19_v1_chr11_+_112832212	681411	+	AY364435|C11orf34|349633|chromosome 11 open reading frame 34##NM_001145024|C11orf34|349633|chromosome 11 open reading frame 34##NM_000317|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC018029|PTS|5805|6-pyruvoyltetrahydropterin synthase##D17400|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK310768|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC009686|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK307133|PTS|5805|6-pyruvoyltetrahydropterin synthase##M97655|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM392676|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393300|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393668|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ890961|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ894133|PTS|5805|6-pyruvoyltetrahydropterin synthase##NM_001037290|BCO2|83875|beta-carotene oxygenase 2##AK027801|BCO2|83875|beta-carotene oxygenase 2##AK297853|BCO2|83875|beta-carotene oxygenase 2##AB096252|BCO2|83875|beta-carotene oxygenase 2##NM_000615|NCAM1|4684|neural cell adhesion molecule 1##NM_001076682|NCAM1|4684|neural cell adhesion molecule 1##NM_001242607|NCAM1|4684|neural cell adhesion molecule 1##NM_001242608|NCAM1|4684|neural cell adhesion molecule 1##NM_181351|NCAM1|4684|neural cell adhesion molecule 1##AK314589|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1	0.999287	CTCF.p2:28:0.999
chr1	6854356	6854480	reg1012823.p1	8.742	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-8927	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-92487	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-92536	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	976958	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	989991	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	990407	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.866039	CTCF.p2:-16:0.866
chrX	80132520	80132625	reg1014496.p1	8.742	+	BC111490 AY497046 AY497048 AY497049 AY497050 AY497051 AY497052 AY497053 AY497054 AY497055 NM_153252	-67365	-	BX537938 NM_152630 BC030784 AK313875 BC028710 BC034979	-456610	+	AK128147 NM_001170574	-541570	+	NM_003022 AK024892 AK309350 BC103762 TSC_hg19_v1_chrX_+_80457495	324831	+	AK094058 AX748432 NM_030763	324868	-	TSC_hg19_v1_chrX_+_80457572 AK309351	325004	+	BC111490|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497046|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497048|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497049|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497050|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497051|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497052|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497053|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497054|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497055|BRWD3|254065|bromodomain and WD repeat domain containing 3##NM_153252|BRWD3|254065|bromodomain and WD repeat domain containing 3##BX537938|FAM46D|169966|family with sequence similarity 46, member D##NM_152630|FAM46D|169966|family with sequence similarity 46, member D##BC030784|FAM46D|169966|family with sequence similarity 46, member D##AK313875|FAM46D|169966|family with sequence similarity 46, member D##BC028710|FAM46D|169966|family with sequence similarity 46, member D##BC034979|FAM46D|169966|family with sequence similarity 46, member D##AK128147|FAM46D|169966|family with sequence similarity 46, member D##NM_001170574|FAM46D|169966|family with sequence similarity 46, member D##NM_003022|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK024892|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309350|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##BC103762|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	0.863954	CTCF.p2:-18:0.864
chr15	60878107	60878220	reg1013908.p1	8.741	+	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-106889	-	AB587463 BC068065 BC009564 BC021114 BC052567 BC001388 BC013843 D00017 TSC_hg19_v1_chr15_-_60690186 AK222542 BX640598 AK297923 BC015834 BC023990 BC066955 BC093056 D28364 NM_001002857 NM_001002858 NM_001136015 NM_004039 AK309956 BC016774	-188002	-	TSC_hg19_v1_chr15_+_60296509 AK314075	-581614	+	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	6516	-	U04899 U04898 NM_002943 NM_134260	41522	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	643261	-	BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##BC068065|ANXA2|302|annexin A2##BC009564|ANXA2|302|annexin A2##BC021114|ANXA2|302|annexin A2##BC052567|ANXA2|302|annexin A2##BC001388|ANXA2|302|annexin A2##BC013843|ANXA2|302|annexin A2##D00017|ANXA2|302|annexin A2##AK222542|ANXA2|302|annexin A2##BX640598|ANXA2|302|annexin A2##AK297923|ANXA2|302|annexin A2##BC015834|ANXA2|302|annexin A2##BC023990|ANXA2|302|annexin A2##BC066955|ANXA2|302|annexin A2##BC093056|ANXA2|302|annexin A2##D28364|ANXA2|302|annexin A2##NM_001002857|ANXA2|302|annexin A2##NM_001002858|ANXA2|302|annexin A2##NM_001136015|ANXA2|302|annexin A2##NM_004039|ANXA2|302|annexin A2##BC016774|ANXA2|302|annexin A2##AK314075|FOXB1|27023|forkhead box B1##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A	0.999242	CTCF.p2:13:0.999
chr17	40374291	40374396	reg1013912.p1	8.741	+	AK298933 TSC_hg19_v1_chr17_-_40346487 BC022784 AK122777 AK123075 AK307058 BC011056 AK075277 NM_001142622 NM_001142623 NM_032484	-27855	-	AB463761 AF041240 NM_001524	-36917	-	TSC_hg19_v1_chr17_-_40333301 AB022698 NM_012285	-41068	-	AK308163 TSC_hg19_v1_chr17_-_40428385	54007	-	TSC_hg19_v1_chr17_-_40428410 U47686 AB208920 BC020868 BC065227 NM_012448	54089	-	NM_003152 U43185	65221	+	AK298933|GHDC|84514|GH3 domain containing##BC022784|GHDC|84514|GH3 domain containing##AK122777|GHDC|84514|GH3 domain containing##AK123075|GHDC|84514|GH3 domain containing##AK307058|GHDC|84514|GH3 domain containing##BC011056|GHDC|84514|GH3 domain containing##AK075277|GHDC|84514|GH3 domain containing##NM_001142622|GHDC|84514|GH3 domain containing##NM_001142623|GHDC|84514|GH3 domain containing##NM_032484|GHDC|84514|GH3 domain containing##AF041240|HCRT|3060|hypocretin (orexin) neuropeptide precursor##NM_001524|HCRT|3060|hypocretin (orexin) neuropeptide precursor##AB022698|KCNH4|23415|potassium voltage-gated channel, subfamily H (eag-related), member 4##NM_012285|KCNH4|23415|potassium voltage-gated channel, subfamily H (eag-related), member 4##AK308163|STAT5B|6777|signal transducer and activator of transcription 5B##U47686|STAT5B|6777|signal transducer and activator of transcription 5B##AB208920|STAT5B|6777|signal transducer and activator of transcription 5B##BC020868|STAT5B|6777|signal transducer and activator of transcription 5B##BC065227|STAT5B|6777|signal transducer and activator of transcription 5B##NM_012448|STAT5B|6777|signal transducer and activator of transcription 5B##NM_003152|STAT5A|6776|signal transducer and activator of transcription 5A##U43185|STAT5A|6776|signal transducer and activator of transcription 5A	0.251769	CTCF.p2:-1:0.252
chr11	111457168	111457280	reg1016585.p1	8.740	+	TSC_hg19_v1_chr11_-_111412453 AK096925	-44776	-	AY358554 TSC_hg19_v1_chr11_+_111411485 AK055654 AK296231 BC025407 AK298165	-45769	+	AK055539 NM_178834	-45992	+	TSC_hg19_v1_chr11_+_111473176 NM_015191 AK291233 AL136764 AB018324 AB096248 AK000396 BC113459 BC117183 AB084424	16009	+	M65254 TSC_hg19_v1_chr11_-_111637059	179806	-	AB384965 DQ890606 DQ894107 EU176538 AK292275 AK293388 AK294716 TSC_hg19_v1_chr11_-_111637114 BC027596 AK296455 AK301705 AF087438 AF163473 NM_001177562 NM_001177563 NM_002716 NM_181699 NM_181700	179902	-	AY358554|LAYN|143903|layilin##AK055654|LAYN|143903|layilin##AK296231|LAYN|143903|layilin##BC025407|LAYN|143903|layilin##AK298165|LAYN|143903|layilin##AK055539|LAYN|143903|layilin##NM_178834|LAYN|143903|layilin##NM_015191|SIK2|23235|salt-inducible kinase 2##AK291233|SIK2|23235|salt-inducible kinase 2##AL136764|SIK2|23235|salt-inducible kinase 2##AB018324|SIK2|23235|salt-inducible kinase 2##AB096248|SIK2|23235|salt-inducible kinase 2##AK000396|SIK2|23235|salt-inducible kinase 2##BC113459|SIK2|23235|salt-inducible kinase 2##BC117183|SIK2|23235|salt-inducible kinase 2##AB084424|SIK2|23235|salt-inducible kinase 2##M65254|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##DQ890606|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##DQ894107|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##EU176538|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK292275|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK293388|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK294716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##BC027596|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK296455|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK301705|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF087438|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF163473|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177562|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177563|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_002716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181699|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181700|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta	0.188364	
chr11	65238970	65239082	reg1014111.p1	8.739	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	-45503	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	-46626	+	TSC_hg19_v1_chr11_+_65190274 AK026198	-48748	+	TSC_hg19_v1_chr11_+_65265158 EF177381	26177	+	TSC_hg19_v1_chr11_+_65266515 BC025986 BX538238 FJ209305	27475	+	TSC_hg19_v1_chr11_+_65266869 BC104662	27773	+	AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##EF177381|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BC025986|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BX538238|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)	0.0	
chr1	169778871	169779018	reg1017089.p1	8.739	+	AL354614 NM_018186	-14395	+	TSC_hg19_v1_chr1_+_169764185 AK303296 BC011012 AK001568 BC091516 AK096493 AK310638 AK299369 EU832166 EU832260	-14736	+	AL035369 NM_033418 AK313909	-14912	-	AL117233 TSC_hg19_v1_chr1_-_169863038 BC014662 AK292507	84069	-	TSC_hg19_v1_chr1_-_169863059 NM_020423 NM_181093	84118	-	AK122897 NM_001204517	259111	-	AL354614|C1orf112|55732|chromosome 1 open reading frame 112##NM_018186|C1orf112|55732|chromosome 1 open reading frame 112##AK303296|C1orf112|55732|chromosome 1 open reading frame 112##BC011012|C1orf112|55732|chromosome 1 open reading frame 112##AK001568|C1orf112|55732|chromosome 1 open reading frame 112##BC091516|C1orf112|55732|chromosome 1 open reading frame 112##AK096493|C1orf112|55732|chromosome 1 open reading frame 112##AK310638|C1orf112|55732|chromosome 1 open reading frame 112##AK299369|C1orf112|55732|chromosome 1 open reading frame 112##EU832166|C1orf112|55732|chromosome 1 open reading frame 112##EU832260|C1orf112|55732|chromosome 1 open reading frame 112##AL035369|METTL18|92342|methyltransferase like 18##NM_033418|METTL18|92342|methyltransferase like 18##AK313909|METTL18|92342|methyltransferase like 18##AL117233|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##BC014662|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##AK292507|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##NM_020423|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##NM_181093|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##AK122897|KIFAP3|22920|kinesin-associated protein 3##NM_001204517|KIFAP3|22920|kinesin-associated protein 3	0.923385	CTCF.p2:9:0.923
chr1	18152732	18152843	reg1013826.p2	8.739	+	AK057339 NM_030812 BC028909 U20582	-70941	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	-207922	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	-245772	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	281490	+	NM_152375	654636	+	NM_001135254 NM_002584 NM_013945 X96743	804712	+	AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##NM_152375|KLHDC7A|127707|kelch domain containing 7A##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7	0.995906	CTCF.p2:-5:0.996
chr12	40384458	40384563	reg1015937.p1	8.739	+	BC038754 NM_001031748 BC048120 AK097445	-364515	+	AK314254 NM_005164	-370668	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	-547511	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	115179	-	TSC_hg19_v1_chr12_-_40499870 BC047507	115362	-	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	234349	+	BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2	0.997983	CTCF.p2:-2:0.998
chr5	56795381	56795495	reg1013624.p2	8.739	+	BC137470 BC137473 BX648504 NM_001017992	-16844	-	NM_001127236 AL136844 AB463051 AM392551 AM393442	-285510	+	BC113004 NM_001127235	-324165	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	960498	-	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	991856	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	1083481	+	BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family	0.77677	CTCF.p2:-17:0.777
chr9	37482471	37482581	reg1013717.p1	8.739	+	TSC_hg19_v1_chr9_-_37465448 AK292404	-17085	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	-17131	-	BC010007 TSC_hg19_v1_chr9_-_37465267	-17266	-	TSC_hg19_v1_chr9_+_37485944 BC014331 AK023452 AK302345 AK303167 NM_022490 AK301347 AK024032 AK225050 BC017766 BC001337 CR457313 AK091294 AX746899	3504	+	AF174598 AF176705 NM_012166 TSC_hg19_v1_chr9_-_37576280	93739	-	CR627326 AB435233 TSC_hg19_v1_chr9_-_37592574 BC034247	109993	-	AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##BC014331|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK023452|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK302345|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK303167|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##NM_022490|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK301347|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK024032|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK225050|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC017766|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC001337|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##CR457313|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK091294|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AF174598|FBXO10|26267|F-box protein 10##AF176705|FBXO10|26267|F-box protein 10##NM_012166|FBXO10|26267|F-box protein 10##AB435233|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC034247|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)	0.814635	CTCF.p2:-23:0.815
chr7	85519694	85519828	reg1015379.p1	8.738	+	AK309116 TSC_hg19_v1_chr7_-_84816296	-703526	-	NM_152754	-768515	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-1695439	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	753464	+	AK291406 TSC_hg19_v1_chr7_+_86273870	754110	+	AK294701 TSC_hg19_v1_chr7_+_86274004 BC022496	754230	+	AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3##AK291406|GRM3|2913|glutamate receptor, metabotropic 3##AK294701|GRM3|2913|glutamate receptor, metabotropic 3##BC022496|GRM3|2913|glutamate receptor, metabotropic 3	0.684493	CTCF.p2:-5:0.684
chr15	73014552	73014651	reg1012177.p1	8.737	+	NM_001252678 NM_033028 TSC_hg19_v1_chr15_+_72978547 AK303706 AF359281 AK298922 AK314507 BX647855 BC027624 AK075321 AK302224 AB528022 DQ891519 DQ894709	-36058	+	NM_018652	-67564	+	TSC_hg19_v1_chr15_+_72766706 AB209432 BC051877	-247885	+	BC037410 TSC_hg19_v1_chr15_-_73051778	37113	-	TSC_hg19_v1_chr15_-_73076054 CU675251 EU831454 EU831541 BC018074	61439	-	TSC_hg19_v1_chr15_-_73076058 AK075560 AK293282	61458	-	NM_001252678|BBS4|585|Bardet-Biedl syndrome 4##NM_033028|BBS4|585|Bardet-Biedl syndrome 4##AK303706|BBS4|585|Bardet-Biedl syndrome 4##AF359281|BBS4|585|Bardet-Biedl syndrome 4##AK298922|BBS4|585|Bardet-Biedl syndrome 4##AK314507|BBS4|585|Bardet-Biedl syndrome 4##BX647855|BBS4|585|Bardet-Biedl syndrome 4##BC027624|BBS4|585|Bardet-Biedl syndrome 4##AK075321|BBS4|585|Bardet-Biedl syndrome 4##AK302224|BBS4|585|Bardet-Biedl syndrome 4##DQ891519|BBS4|585|Bardet-Biedl syndrome 4##DQ894709|BBS4|585|Bardet-Biedl syndrome 4##NM_018652|GOLGA6B|55889|golgin A6 family, member B##AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##EU831454|ADPGK|83440|ADP-dependent glucokinase##EU831541|ADPGK|83440|ADP-dependent glucokinase##BC018074|ADPGK|83440|ADP-dependent glucokinase##AK075560|ADPGK|83440|ADP-dependent glucokinase##AK293282|ADPGK|83440|ADP-dependent glucokinase	0.943605	CTCF.p2:6:0.926
chr16	30043661	30043812	reg1017516.p1	8.737	+	AB593090 AB593089 AF370365 NM_031478	-1582	-	AK058133 BC101433 BC101434 BC101435 BC101436 BC127955 NM_001109659 NM_001109660	-9082	+	TSC_hg19_v1_chr16_-_30022300 AK293651 BC055284 NM_003586	-21386	-	NM_000034 AK308748 TSC_hg19_v1_chr16_+_30064461	20700	+	TSC_hg19_v1_chr16_+_30064512 AK098778 BC004333 AK308495	20764	+	TSC_hg19_v1_chr16_+_30075504 M11560	31738	+	AB593090|FAM57B|83723|family with sequence similarity 57, member B##AB593089|FAM57B|83723|family with sequence similarity 57, member B##AF370365|FAM57B|83723|family with sequence similarity 57, member B##NM_031478|FAM57B|83723|family with sequence similarity 57, member B##AK058133|C16orf92|146378|chromosome 16 open reading frame 92##BC101433|C16orf92|146378|chromosome 16 open reading frame 92##BC101434|C16orf92|146378|chromosome 16 open reading frame 92##BC101435|C16orf92|146378|chromosome 16 open reading frame 92##BC101436|C16orf92|146378|chromosome 16 open reading frame 92##BC127955|C16orf92|146378|chromosome 16 open reading frame 92##NM_001109659|C16orf92|146378|chromosome 16 open reading frame 92##NM_001109660|C16orf92|146378|chromosome 16 open reading frame 92##AK293651|DOC2A|8448|double C2-like domains, alpha##BC055284|DOC2A|8448|double C2-like domains, alpha##NM_003586|DOC2A|8448|double C2-like domains, alpha##NM_000034|ALDOA|226|aldolase A, fructose-bisphosphate##AK308748|ALDOA|226|aldolase A, fructose-bisphosphate##AK098778|ALDOA|226|aldolase A, fructose-bisphosphate##BC004333|ALDOA|226|aldolase A, fructose-bisphosphate##AK308495|ALDOA|226|aldolase A, fructose-bisphosphate##M11560|ALDOA|226|aldolase A, fructose-bisphosphate	0.99842	CTCF.p2:0:0.998
chr12	21850903	21851054	reg1015290.p1	8.736	+	TSC_hg19_v1_chr12_-_21810792 NM_002300	-40183	-	TSC_hg19_v1_chr12_-_21810774 AK312328 BC015122	-40205	-	TSC_hg19_v1_chr12_-_21810756 BC002362 AY189689	-40218	-	BC000544 AK291821 D50312 NM_004982	76702	-	NM_005691 NM_020297	238649	-	AK056519 TSC_hg19_v1_chr12_-_22094251 BC033804	243272	-	NM_002300|LDHB|3945|lactate dehydrogenase B##AK312328|LDHB|3945|lactate dehydrogenase B##BC015122|LDHB|3945|lactate dehydrogenase B##BC002362|LDHB|3945|lactate dehydrogenase B##AY189689|LDHB|3945|lactate dehydrogenase B##BC000544|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##AK291821|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##D50312|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##NM_004982|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##NM_005691|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##NM_020297|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##AK056519|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##BC033804|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	0.999707	CTCF.p2:-26:1.000
chr15	86402151	86402254	reg1014786.p1	8.735	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-64007	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-64105	-	AF127481 NM_144767	-181935	+	NM_152336	283039	+	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	2397764	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	2608426	-	NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46	0.998457	CTCF.p2:-12:0.998
chr4	45455380	45455502	reg1016484.p1	8.735	+	TSC_hg19_v1_chr4_-_44728574 AK296051 AB209904 AK055639 AY173948 AK129655 AK308920 AF247786 NM_138335	-726877	-	TSC_hg19_v1_chr4_+_44680469 NM_021927 BX647242 BC036768 BC012338 AK225314 AK023282 AK308667	-774981	+	AK096895 BC103995 BC103996 NM_182592	-801784	-	CU689108 DQ890976 DQ894150 CR933628 BC031087 AK289806 AK299884 BX648937 NM_173536 AK122845	670572	-	TSC_hg19_v1_chr4_-_46391400 AK125179 NM_001114175	935958	-	TSC_hg19_v1_chr4_-_46391484 AK307128	936072	-	AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_021927|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BX647242|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC036768|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC012338|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK225314|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK023282|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK308667|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7##DQ890976|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##DQ894150|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##CR933628|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BC031087|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK289806|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK299884|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BX648937|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##NM_173536|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK122845|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK125179|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_001114175|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK307128|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2	0.973892	CTCF.p2:-1:0.974
chr7	89942201	89942333	reg1017705.p1	8.735	+	NM_001039706 NM_001160138 AK093991 AK303034 AX748399 BC036351 AK302636 BC141834 BC142655 BC140742 AY349356	-67655	+	AF526382 AY358267 NM_001040666	-99134	+	AF455138 NM_001244944 NM_001244945 NM_152999 AK092666 AX747660 TSC_hg19_v1_chr7_+_89841171 AY008443 AY008444 AY008445 NM_001040665 NM_001244946 AK315043	-101152	+	TSC_hg19_v1_chr7_+_89976015 AF351613 NM_001042717 NM_033107 AK095561 BC107714 CR933597 AK294325 BC144162	33737	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	90437	+	TSC_hg19_v1_chr7_+_90032774 AL136770 BC016061	90537	+	NM_001039706|C7orf63|79846|chromosome 7 open reading frame 63##NM_001160138|C7orf63|79846|chromosome 7 open reading frame 63##AK093991|C7orf63|79846|chromosome 7 open reading frame 63##AK303034|C7orf63|79846|chromosome 7 open reading frame 63##BC036351|C7orf63|79846|chromosome 7 open reading frame 63##AK302636|C7orf63|79846|chromosome 7 open reading frame 63##BC141834|C7orf63|79846|chromosome 7 open reading frame 63##BC142655|C7orf63|79846|chromosome 7 open reading frame 63##BC140742|C7orf63|79846|chromosome 7 open reading frame 63##AY349356|C7orf63|79846|chromosome 7 open reading frame 63##AF526382|STEAP2|261729|STEAP family member 2, metalloreductase##AY358267|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040666|STEAP2|261729|STEAP family member 2, metalloreductase##AF455138|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244944|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244945|STEAP2|261729|STEAP family member 2, metalloreductase##NM_152999|STEAP2|261729|STEAP family member 2, metalloreductase##AK092666|STEAP2|261729|STEAP family member 2, metalloreductase##AY008443|STEAP2|261729|STEAP family member 2, metalloreductase##AY008444|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040665|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244946|STEAP2|261729|STEAP family member 2, metalloreductase##AK315043|STEAP2|261729|STEAP family member 2, metalloreductase##AF351613|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001042717|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_033107|GTPBP10|85865|GTP-binding protein 10 (putative)##AK095561|GTPBP10|85865|GTP-binding protein 10 (putative)##BC107714|GTPBP10|85865|GTP-binding protein 10 (putative)##CR933597|GTPBP10|85865|GTP-binding protein 10 (putative)##AK294325|GTPBP10|85865|GTP-binding protein 10 (putative)##BC144162|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12##AL136770|CLDN12|9069|claudin 12	0.520738	CTCF.p2:-9:0.521
chr16	2889000	2889103	reg1013760.p1	8.734	+	NM_145252 AY359021 JN411265 BC009722 AB528168 AM392915 AM393869 EF067313 AK311810	-8813	+	BC074999 BC075000 TSC_hg19_v1_chr16_+_2867242 AY359034 AF058300 AB031329 AB031330	-21805	+	NM_006799 NM_144956 NM_144957 AB031331 TSC_hg19_v1_chr16_+_2867207	-21866	+	CU679465 AB010779 AF321182 BC009726 AY358396 NM_022119	19086	-	NM_001142499 NM_001142500 NM_138439 TSC_hg19_v1_chr16_+_2933215 BC014089	44205	+	TSC_hg19_v1_chr16_+_2961983 BC028572 NM_020912 NM_032296	72913	+	NM_145252|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AY359021|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##JN411265|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC009722|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM392915|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM393869|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##EF067313|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AK311810|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC074999|PRSS21|10942|protease, serine, 21 (testisin)##BC075000|PRSS21|10942|protease, serine, 21 (testisin)##AY359034|PRSS21|10942|protease, serine, 21 (testisin)##AF058300|PRSS21|10942|protease, serine, 21 (testisin)##AB031329|PRSS21|10942|protease, serine, 21 (testisin)##AB031330|PRSS21|10942|protease, serine, 21 (testisin)##NM_006799|PRSS21|10942|protease, serine, 21 (testisin)##NM_144956|PRSS21|10942|protease, serine, 21 (testisin)##NM_144957|PRSS21|10942|protease, serine, 21 (testisin)##AB031331|PRSS21|10942|protease, serine, 21 (testisin)##AB010779|PRSS22|64063|protease, serine, 22##AF321182|PRSS22|64063|protease, serine, 22##BC009726|PRSS22|64063|protease, serine, 22##AY358396|PRSS22|64063|protease, serine, 22##NM_022119|PRSS22|64063|protease, serine, 22##NM_001142499|FLYWCH2|114984|FLYWCH family member 2##NM_001142500|FLYWCH2|114984|FLYWCH family member 2##NM_138439|FLYWCH2|114984|FLYWCH family member 2##BC014089|FLYWCH2|114984|FLYWCH family member 2##BC028572|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_020912|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_032296|FLYWCH1|84256|FLYWCH-type zinc finger 1	0.026559	
chr9	69478772	69478897	reg1014926.p1	8.734	+	AL136793 NM_001098805	-96854	+	AF265442 BC069006 AK293173 NM_001085457	-216280	-	NM_001085476	-276631	-	NM_001126334	699980	-	NM_001099279 NM_199244	950896	-	CU688346 TSC_hg19_v1_chr9_-_70490092	1011247	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	1.419076	CTCF.p2:8:0.981	CTCF.p2:-45:0.438
chr14	104038489	104038621	reg1014996.p1	8.733	+	TSC_hg19_v1_chr14_+_104029325 AK299527 NM_032374 AK223092 AK223103 BC007412	-9244	+	TSC_hg19_v1_chr14_-_104028984 AB020680 NM_001015048	-9494	-	AK291312 AK225741 TSC_hg19_v1_chr14_-_104028604 BC044216 AF095195 AK225730 BC050551 NM_001015049 NM_004873	-9940	-	TSC_hg19_v1_chr14_+_104095547 NM_001130107 NM_005552 NM_182923 AK294508 BC008881 L04733 AF527736 AY180164	57096	+	AK124498 TSC_hg19_v1_chr14_-_104178577	139953	-	TSC_hg19_v1_chr14_-_104181759 AK022829 BC011725 BX161398 BC001036 AK023646 NM_001100118 NM_001100119 NM_005432	143228	-	NM_032374|APOPT1|84334|apoptogenic 1##AK223092|APOPT1|84334|apoptogenic 1##AK223103|APOPT1|84334|apoptogenic 1##BC007412|APOPT1|84334|apoptogenic 1##AB020680|BAG5|9529|BCL2-associated athanogene 5##NM_001015048|BAG5|9529|BCL2-associated athanogene 5##AK291312|BAG5|9529|BCL2-associated athanogene 5##AK225741|BAG5|9529|BCL2-associated athanogene 5##BC044216|BAG5|9529|BCL2-associated athanogene 5##AF095195|BAG5|9529|BCL2-associated athanogene 5##AK225730|BAG5|9529|BCL2-associated athanogene 5##BC050551|BAG5|9529|BCL2-associated athanogene 5##NM_001015049|BAG5|9529|BCL2-associated athanogene 5##NM_004873|BAG5|9529|BCL2-associated athanogene 5##NM_001130107|KLC1|3831|kinesin light chain 1##NM_005552|KLC1|3831|kinesin light chain 1##NM_182923|KLC1|3831|kinesin light chain 1##AK294508|KLC1|3831|kinesin light chain 1##BC008881|KLC1|3831|kinesin light chain 1##L04733|KLC1|3831|kinesin light chain 1##AF527736|KLC1|3831|kinesin light chain 1##AY180164|KLC1|3831|kinesin light chain 1##AK124498|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK022829|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC011725|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BX161398|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC001036|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK023646|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100118|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100119|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_005432|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3	0.951625	CTCF.p2:-30:0.952
chr15	74613126	74613241	reg1013316.p2	8.733	+	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-2278	+	NM_025055 AK057417	-84479	+	AK299191 NM_001199040	-111138	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	45352	-	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	46820	-	NM_001146030 TSC_hg19_v1_chr15_-_74726050	112846	-	AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_025055|CCDC33|80125|coiled-coil domain containing 33##AK057417|CCDC33|80125|coiled-coil domain containing 33##AK299191|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001199040|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)	0.998043	CTCF.p2:-1:0.998
chr12	127865718	127865865	reg1014917.p2	8.732	+	NM_052907	-2054630	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-2315723	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-2315850	+	NM_001136103	886156	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	1442652	-	BC043528 TSC_hg19_v1_chr12_+_129337985	1472193	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.967813	CTCF.p2:16:0.968
chr12	64195896	64196025	reg1015194.p1	8.732	+	BX647105 BX647419 TSC_hg19_v1_chr12_+_64173925	-22025	+	TSC_hg19_v1_chr12_+_64173629 AB015633 NM_014254 BC013152 BC002596 AK289382 CU680528 DQ891077 DQ894259	-22293	+	BC125215 BC125216 TSC_hg19_v1_chr12_-_64062283 AY358792 AL833344 AK310102 AK057511 BC068442 NM_173812	-133664	-	TSC_hg19_v1_chr12_+_64237847 BC065032	41766	+	TSC_hg19_v1_chr12_+_64238511 BC053903 NM_020762 BC029919	42586	+	BC071634 AK057111 BC036246 AK129933 NM_152440	420093	-	BX647105|TMEM5|10329|transmembrane protein 5##BX647419|TMEM5|10329|transmembrane protein 5##AB015633|TMEM5|10329|transmembrane protein 5##NM_014254|TMEM5|10329|transmembrane protein 5##BC013152|TMEM5|10329|transmembrane protein 5##BC002596|TMEM5|10329|transmembrane protein 5##AK289382|TMEM5|10329|transmembrane protein 5##DQ891077|TMEM5|10329|transmembrane protein 5##DQ894259|TMEM5|10329|transmembrane protein 5##BC125215|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC125216|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AY358792|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AL833344|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK310102|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK057511|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC068442|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_173812|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC071634|C12orf66|144577|chromosome 12 open reading frame 66##AK057111|C12orf66|144577|chromosome 12 open reading frame 66##BC036246|C12orf66|144577|chromosome 12 open reading frame 66##AK129933|C12orf66|144577|chromosome 12 open reading frame 66##NM_152440|C12orf66|144577|chromosome 12 open reading frame 66	0.422713	CTCF.p2:16:0.423
chr3	128216848	128216940	reg1014708.p2	8.732	+	BC051342 BC002557 NM_032638 BX647499 TSC_hg19_v1_chr3_-_128212044	-4858	-	TSC_hg19_v1_chr3_-_128207374 AK314826 NM_001145661	-9524	-	M77810 BC015577 BC018988 BC051272 NM_001145662 M68891 TSC_hg19_v1_chr3_-_128206775	-10155	-	AF008192 NM_007354	78034	-	BC007995 TSC_hg19_v1_chr3_-_128369648 CR456742 AB527671 CU679817	152692	-	TSC_hg19_v1_chr3_-_128369662 AK297941 AK312369 AK296905 CR749284 BC010839 AK223595	152788	-	BC051342|GATA2|2624|GATA binding protein 2##BC002557|GATA2|2624|GATA binding protein 2##NM_032638|GATA2|2624|GATA binding protein 2##BX647499|GATA2|2624|GATA binding protein 2##AK314826|GATA2|2624|GATA binding protein 2##NM_001145661|GATA2|2624|GATA binding protein 2##M77810|GATA2|2624|GATA binding protein 2##BC015577|GATA2|2624|GATA binding protein 2##BC018988|GATA2|2624|GATA binding protein 2##BC051272|GATA2|2624|GATA binding protein 2##NM_001145662|GATA2|2624|GATA binding protein 2##M68891|GATA2|2624|GATA binding protein 2##AF008192|C3orf27|23434|chromosome 3 open reading frame 27##NM_007354|C3orf27|23434|chromosome 3 open reading frame 27##BC007995|RPN1|6184|ribophorin I##CR456742|RPN1|6184|ribophorin I##AK297941|RPN1|6184|ribophorin I##AK312369|RPN1|6184|ribophorin I##AK296905|RPN1|6184|ribophorin I##CR749284|RPN1|6184|ribophorin I##BC010839|RPN1|6184|ribophorin I##AK223595|RPN1|6184|ribophorin I	1.265344	CTCF.p2:-32:0.994	CTCF.p2:46:0.271
chr11	94252796	94252904	reg1014349.p1	8.731	+	NM_001190462	-7156	+	TSC_hg19_v1_chr11_+_94227168 NM_017704 AF025354 AK000196 BC017798 AK000448 AL833977	-25692	+	U37359 TSC_hg19_v1_chr11_-_94227011 BC017823 BC005241 AK095388 AF022778 AK308318 NM_005590 NM_005591	-25877	-	AK293616 NM_002033 TSC_hg19_v1_chr11_+_94277086 M58597 BC136373 BC136374	24229	+	TSC_hg19_v1_chr11_+_94277605 M58596	24749	+	NM_152431 AB079366 AK093475 AX748151 BC031060 DQ891240 DQ894425 AB590313 CU689100	47728	+	NM_001190462|LOC643037|643037|uncharacterized LOC643037##NM_017704|ANKRD49|54851|ankyrin repeat domain 49##AF025354|ANKRD49|54851|ankyrin repeat domain 49##AK000196|ANKRD49|54851|ankyrin repeat domain 49##BC017798|ANKRD49|54851|ankyrin repeat domain 49##AK000448|ANKRD49|54851|ankyrin repeat domain 49##AL833977|ANKRD49|54851|ankyrin repeat domain 49##U37359|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC017823|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC005241|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK095388|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AF022778|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK308318|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005590|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005591|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK293616|PIWIL4|143689|piwi-like 4 (Drosophila)##NM_002033|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58597|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136373|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136374|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)##AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)##AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)##BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)	0.641602	CTCF.p2:-4:0.642
chr1	23215848	23215949	reg1013380.p1	8.731	+	TSC_hg19_v1_chr1_+_23037331 NM_004442 NM_017449 AK299701 BC067861 AB210018 AF025304 CU686595 L36643	-178475	+	NM_000491 TSC_hg19_v1_chr1_+_22979728 BC008983	-236175	+	NM_001114101 NM_172369 AK057792 TSC_hg19_v1_chr1_+_22970125 AF087892 AK226152 BC009016 AK130613	-245711	+	NM_001242521	126444	-	TSC_hg19_v1_chr1_+_23345960 NM_001009999 NM_015013	130057	+	TSC_hg19_v1_chr1_+_23345985 AB011173 BC040194 AK290328 BC048134	130150	+	NM_004442|EPHB2|2048|EPH receptor B2##NM_017449|EPHB2|2048|EPH receptor B2##AK299701|EPHB2|2048|EPH receptor B2##BC067861|EPHB2|2048|EPH receptor B2##AB210018|EPHB2|2048|EPH receptor B2##AF025304|EPHB2|2048|EPH receptor B2##L36643|EPHB2|2048|EPH receptor B2##NM_000491|C1QB|713|complement component 1, q subcomponent, B chain##BC008983|C1QB|713|complement component 1, q subcomponent, B chain##NM_001114101|C1QC|714|complement component 1, q subcomponent, C chain##NM_172369|C1QC|714|complement component 1, q subcomponent, C chain##AK057792|C1QC|714|complement component 1, q subcomponent, C chain##AF087892|C1QC|714|complement component 1, q subcomponent, C chain##AK226152|C1QC|714|complement component 1, q subcomponent, C chain##BC009016|C1QC|714|complement component 1, q subcomponent, C chain##AK130613|C1QC|714|complement component 1, q subcomponent, C chain##NM_001242521|LOC729059|729059|uncharacterized LOC729059##NM_001009999|KDM1A|23028|lysine (K)-specific demethylase 1A##NM_015013|KDM1A|23028|lysine (K)-specific demethylase 1A##AB011173|KDM1A|23028|lysine (K)-specific demethylase 1A##BC040194|KDM1A|23028|lysine (K)-specific demethylase 1A##AK290328|KDM1A|23028|lysine (K)-specific demethylase 1A##BC048134|KDM1A|23028|lysine (K)-specific demethylase 1A	0.0	
chr14	34697327	34697452	reg1014853.p2	8.731	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	-277240	-	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1288899	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1898853	+	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	234098	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	311496	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	401966	-	BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6	0.830945	CTCF.p2:11:0.831
chr1	71987478	71987606	reg1016315.p1	8.731	+	NM_005455 NM_203350	-440571	-	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	-440835	-	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	-474163	-	TSC_hg19_v1_chr1_-_72748182 AK295481 BX538014 AK092307 AX747470 NM_173808	760669	-	TSC_hg19_v1_chr1_-_72748491 AY358132	760963	-	AK131476 BC020778 BX647210 TSC_hg19_v1_chr1_-_74663861 NM_001105659	2676306	-	NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK295481|NEGR1|257194|neuronal growth regulator 1##BX538014|NEGR1|257194|neuronal growth regulator 1##AK092307|NEGR1|257194|neuronal growth regulator 1##NM_173808|NEGR1|257194|neuronal growth regulator 1##AK131476|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BC020778|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BX647210|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001105659|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3	0.819022	CTCF.p2:1:0.819
chr2	189377302	189377443	reg1015285.p1	8.731	+	TSC_hg19_v1_chr2_+_189157557 BC068525 AF191771 AF200715 AF075014	-219791	+	TSC_hg19_v1_chr2_+_189156740 AK298626	-220624	+	TSC_hg19_v1_chr2_+_189156656 BC001103	-220710	+	AY039011 NM_052952	277458	-	TSC_hg19_v1_chr2_+_189839098 AK308010 NM_000090 BC028178	461722	+	X14420 BX649097 TSC_hg19_v1_chr2_+_189839117	461746	+	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AK298626|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##BC001103|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AY039011|DIRC1|116093|disrupted in renal carcinoma 1##NM_052952|DIRC1|116093|disrupted in renal carcinoma 1##AK308010|COL3A1|1281|collagen, type III, alpha 1##NM_000090|COL3A1|1281|collagen, type III, alpha 1##BC028178|COL3A1|1281|collagen, type III, alpha 1##X14420|COL3A1|1281|collagen, type III, alpha 1	0.830367	CTCF.p2:13:0.830
chr7	157043433	157043564	reg1016093.p1	8.731	+	TSC_hg19_v1_chr7_+_157023934 AK098447	-19492	+	D13635 TSC_hg19_v1_chr7_+_156931668 BC014029	-111815	+	TSC_hg19_v1_chr7_+_156931631 NM_014671	-111852	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	86213	+	TSC_hg19_v1_chr7_+_157647233 BC034557	603776	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	1336955	-	D13635|UBE3C|9690|ubiquitin protein ligase E3C##BC014029|UBE3C|9690|ubiquitin protein ligase E3C##NM_014671|UBE3C|9690|ubiquitin protein ligase E3C##AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC034557|LOC100506585|100506585|uncharacterized LOC100506585##DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	0.965238	CTCF.p2:0:0.965
chrX	21764016	21764147	reg1014879.p1	8.731	+	BC109031 AK092279 AX747450 NM_153270	-87650	-	TSC_hg19_v1_chrX_+_21392535 NM_001168647 NM_001168648 NM_001168649 NM_014927 AB020709 AK294728	-371573	+	TSC_hg19_v1_chrX_-_20285141 AK294373	-1478917	-	BC005948 AF129505 AJ250584 NM_014332 AK312134	12136	-	NM_015884 TSC_hg19_v1_chrX_+_21857734	93618	+	TSC_hg19_v1_chrX_+_21857746 AK292933 AF019612 BC036465	93678	+	BC109031|KLHL34|257240|kelch-like 34 (Drosophila)##AK092279|KLHL34|257240|kelch-like 34 (Drosophila)##NM_153270|KLHL34|257240|kelch-like 34 (Drosophila)##NM_001168647|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168648|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168649|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_014927|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AB020709|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AK294728|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AK294373|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC005948|SMPX|23676|small muscle protein, X-linked##AF129505|SMPX|23676|small muscle protein, X-linked##AJ250584|SMPX|23676|small muscle protein, X-linked##NM_014332|SMPX|23676|small muscle protein, X-linked##AK312134|SMPX|23676|small muscle protein, X-linked##NM_015884|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2##AK292933|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2##AF019612|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2##BC036465|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2	0.181375	
chr11	8835260	8835355	reg1012334.p1	8.730	+	NM_139157 U15131 U15780	-2426	-	AK312305 TSC_hg19_v1_chr11_-_8832217 BX647431 NM_213618	-3092	-	U15779 S45936 TSC_hg19_v1_chr11_-_8739580	-95804	-	TSC_hg19_v1_chr11_-_8892920 AK126554	57610	-	BC036655 NM_005418	97190	-	AF493783 AF493784 AF493785 NM_001206646 NM_001206647 NM_001206648 NM_020642 TSC_hg19_v1_chr11_+_8932745 AK294506 AK294549 AK075308	97443	+	NM_139157|ST5|6764|suppression of tumorigenicity 5##U15131|ST5|6764|suppression of tumorigenicity 5##U15780|ST5|6764|suppression of tumorigenicity 5##AK312305|ST5|6764|suppression of tumorigenicity 5##BX647431|ST5|6764|suppression of tumorigenicity 5##NM_213618|ST5|6764|suppression of tumorigenicity 5##U15779|ST5|6764|suppression of tumorigenicity 5##S45936|ST5|6764|suppression of tumorigenicity 5##AK126554|ST5|6764|suppression of tumorigenicity 5##BC036655|ST5|6764|suppression of tumorigenicity 5##NM_005418|ST5|6764|suppression of tumorigenicity 5##AF493783|AKIP1|56672|A kinase (PRKA) interacting protein 1##AF493784|AKIP1|56672|A kinase (PRKA) interacting protein 1##AF493785|AKIP1|56672|A kinase (PRKA) interacting protein 1##NM_001206646|AKIP1|56672|A kinase (PRKA) interacting protein 1##NM_001206647|AKIP1|56672|A kinase (PRKA) interacting protein 1##NM_001206648|AKIP1|56672|A kinase (PRKA) interacting protein 1##NM_020642|AKIP1|56672|A kinase (PRKA) interacting protein 1##AK294506|AKIP1|56672|A kinase (PRKA) interacting protein 1##AK294549|AKIP1|56672|A kinase (PRKA) interacting protein 1##AK075308|AKIP1|56672|A kinase (PRKA) interacting protein 1	0.427147	CTCF.p2:5:0.427
chr13	41242530	41242655	reg1017110.p1	8.730	+	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	-1880	-	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-1012731	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-1065230	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	102700	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	102740	-	NM_014252 TSC_hg19_v1_chr13_+_41363596 BC002702	120997	+	BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31##NM_014252|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##BC002702|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15	0.0	
chr16	17650580	17650680	reg1013301.p1	8.730	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	-85825	-	TSC_hg19_v1_chr16_+_16326508 AB463143	-1324100	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1324142	+	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	922761	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1147466	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	1151025	-	AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a	0.045425	
chr22	44300441	44300554	reg1016379.p1	8.730	+	BC104839 BC104843 BC143696 BC031820 AK056648 AK127172 NM_001177675 NM_138814	-12648	-	AK295399 AF115311 AL590119 AB587375 CR456588 CU013188 CU013476 DQ892373 DQ895583 CU688978 CU692628 BC022459 TSC_hg19_v1_chr22_-_44258315 AF176342 AF251263 AK313048 AK294622 AF188698 BC028171 NM_014351 BC030665	-42194	-	BC039315 TSC_hg19_v1_chr22_-_44208121 AK296679 AK292498 AK292411 AK058069 NM_022785 NM_198856	-92356	-	AK025665 AL138578 NM_025225 TSC_hg19_v1_chr22_+_44319651 AK308995	19147	+	TSC_hg19_v1_chr22_+_44319684 AK123806 AK315166	19182	+	TSC_hg19_v1_chr22_+_44319688 BC065195 AB463160 CU013026 CU013314 CR456476 CU688018	19240	+	BC104839|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC104843|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC143696|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC031820|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK056648|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK127172|PNPLA5|150379|patatin-like phospholipase domain containing 5##NM_001177675|PNPLA5|150379|patatin-like phospholipase domain containing 5##NM_138814|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK295399|SULT4A1|25830|sulfotransferase family 4A, member 1##AF115311|SULT4A1|25830|sulfotransferase family 4A, member 1##AL590119|SULT4A1|25830|sulfotransferase family 4A, member 1##CR456588|SULT4A1|25830|sulfotransferase family 4A, member 1##CU013188|SULT4A1|25830|sulfotransferase family 4A, member 1##CU013476|SULT4A1|25830|sulfotransferase family 4A, member 1##DQ892373|SULT4A1|25830|sulfotransferase family 4A, member 1##DQ895583|SULT4A1|25830|sulfotransferase family 4A, member 1##BC022459|SULT4A1|25830|sulfotransferase family 4A, member 1##AF176342|SULT4A1|25830|sulfotransferase family 4A, member 1##AF251263|SULT4A1|25830|sulfotransferase family 4A, member 1##AK313048|SULT4A1|25830|sulfotransferase family 4A, member 1##AK294622|SULT4A1|25830|sulfotransferase family 4A, member 1##AF188698|SULT4A1|25830|sulfotransferase family 4A, member 1##BC028171|SULT4A1|25830|sulfotransferase family 4A, member 1##NM_014351|SULT4A1|25830|sulfotransferase family 4A, member 1##BC030665|SULT4A1|25830|sulfotransferase family 4A, member 1##BC039315|EFCAB6|64800|EF-hand calcium binding domain 6##AK296679|EFCAB6|64800|EF-hand calcium binding domain 6##AK292498|EFCAB6|64800|EF-hand calcium binding domain 6##AK292411|EFCAB6|64800|EF-hand calcium binding domain 6##AK058069|EFCAB6|64800|EF-hand calcium binding domain 6##NM_022785|EFCAB6|64800|EF-hand calcium binding domain 6##NM_198856|EFCAB6|64800|EF-hand calcium binding domain 6##AK025665|PNPLA3|80339|patatin-like phospholipase domain containing 3##AL138578|PNPLA3|80339|patatin-like phospholipase domain containing 3##NM_025225|PNPLA3|80339|patatin-like phospholipase domain containing 3##AK123806|PNPLA3|80339|patatin-like phospholipase domain containing 3##AK315166|PNPLA3|80339|patatin-like phospholipase domain containing 3##BC065195|PNPLA3|80339|patatin-like phospholipase domain containing 3##CR456476|PNPLA3|80339|patatin-like phospholipase domain containing 3	0.830069	CTCF.p2:7:0.830
chr4	68776167	68776278	reg1014618.p2	8.730	+	AK296853 BC125195 BC125196 AB002134 NM_004262 AK290289	-26515	-	NM_000406 NM_001012763	-154419	-	TSC_hg19_v1_chr4_-_68566867 AL832015 AL832458 AK094969 AK314371 BC031637 BC126484 BC126486 NM_018227	-209351	-	AY498712 BC111796 AK292950 AF071882 AK131518 NM_001114387 NM_182606	52965	-	AK122625 NM_207407	219364	-	AK123556 NM_001129907	307575	-	AK296853|TMPRSS11D|9407|transmembrane protease, serine 11D##BC125195|TMPRSS11D|9407|transmembrane protease, serine 11D##BC125196|TMPRSS11D|9407|transmembrane protease, serine 11D##AB002134|TMPRSS11D|9407|transmembrane protease, serine 11D##NM_004262|TMPRSS11D|9407|transmembrane protease, serine 11D##AK290289|TMPRSS11D|9407|transmembrane protease, serine 11D##NM_000406|GNRHR|2798|gonadotropin-releasing hormone receptor##NM_001012763|GNRHR|2798|gonadotropin-releasing hormone receptor##AL832015|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AL832458|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK094969|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK314371|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC031637|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC126484|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC126486|UBA6|55236|ubiquitin-like modifier activating enzyme 6##NM_018227|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AY498712|TMPRSS11A|339967|transmembrane protease, serine 11A##BC111796|TMPRSS11A|339967|transmembrane protease, serine 11A##AK292950|TMPRSS11A|339967|transmembrane protease, serine 11A##AF071882|TMPRSS11A|339967|transmembrane protease, serine 11A##AK131518|TMPRSS11A|339967|transmembrane protease, serine 11A##NM_001114387|TMPRSS11A|339967|transmembrane protease, serine 11A##NM_182606|TMPRSS11A|339967|transmembrane protease, serine 11A##AK122625|TMPRSS11F|389208|transmembrane protease, serine 11F##NM_207407|TMPRSS11F|389208|transmembrane protease, serine 11F##AK123556|TMPRSS11BNL|401136|TMPRSS11B N terminal-like##NM_001129907|TMPRSS11BNL|401136|TMPRSS11B N terminal-like	0.67607	CTCF.p2:-5:0.676
chr2	63919274	63919418	reg1014214.p1	8.729	+	TSC_hg19_v1_chr2_+_63816146 NM_001199111 NM_001199112 AK295931 AK300719	-103046	+	TSC_hg19_v1_chr2_+_63816101 AK312331 BC001484 D55654 AK307273	-103233	+	TSC_hg19_v1_chr2_-_63815908 NM_015910	-103499	-	TSC_hg19_v1_chr2_+_64068125 NM_001001521 BC002954 U27460	148857	+	BX647825 NM_006759 AK314263 TSC_hg19_v1_chr2_+_64069029 BC047004 BC000173	149680	+	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	326916	-	NM_001199111|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##NM_001199112|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##AK295931|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##AK300719|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##AK312331|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##BC001484|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##D55654|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##AK307273|MDH1|4190|malate dehydrogenase 1, NAD (soluble)##NM_015910|WDPCP|51057|WD repeat containing planar cell polarity effector##NM_001001521|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC002954|UGP2|7360|UDP-glucose pyrophosphorylase 2##U27460|UGP2|7360|UDP-glucose pyrophosphorylase 2##BX647825|UGP2|7360|UDP-glucose pyrophosphorylase 2##NM_006759|UGP2|7360|UDP-glucose pyrophosphorylase 2##AK314263|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC047004|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC000173|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)	0.993964	CTCF.p2:-10:0.994
chr4	6193327	6193451	reg1013054.p1	8.729	+	DQ206871 TSC_hg19_v1_chr4_-_5894794 NM_001014809	-298645	-	BC009987 TSC_hg19_v1_chr4_-_5891940	-301461	-	TSC_hg19_v1_chr4_-_5890302 NM_001313	-303080	-	TSC_hg19_v1_chr4_-_6202277 AK294356 AK307983 AK056126 AM412307 AM412308 AM412309 AM412310 BC026343 NM_001099433 NM_144720	8895	-	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	78179	+	Y18064 TSC_hg19_v1_chr4_+_6271588	78205	+	DQ206871|CRMP1|1400|collapsin response mediator protein 1##NM_001014809|CRMP1|1400|collapsin response mediator protein 1##BC009987|CRMP1|1400|collapsin response mediator protein 1##NM_001313|CRMP1|1400|collapsin response mediator protein 1##AK294356|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK307983|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK056126|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412307|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412308|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412309|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412310|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##BC026343|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_001099433|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_144720|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)	0.693367	CTCF.p2:15:0.693
chr6	4848999	4849133	reg1014993.p1	8.729	+	AK296985 NM_001143970	-12735	+	TSC_hg19_v1_chr6_+_4776889 BC119682	-72145	+	TSC_hg19_v1_chr6_+_4776647 AK291601 BC108725 NM_004824	-72406	+	BC043397 NM_001143971	41159	+	TSC_hg19_v1_chr6_+_5004043 AK094934	154960	+	TSC_hg19_v1_chr6_-_5004262 BC017871 NM_006638	155204	-	AK296985|CDYL|9425|chromodomain protein, Y-like##NM_001143970|CDYL|9425|chromodomain protein, Y-like##BC119682|CDYL|9425|chromodomain protein, Y-like##AK291601|CDYL|9425|chromodomain protein, Y-like##BC108725|CDYL|9425|chromodomain protein, Y-like##NM_004824|CDYL|9425|chromodomain protein, Y-like##BC043397|CDYL|9425|chromodomain protein, Y-like##NM_001143971|CDYL|9425|chromodomain protein, Y-like##AK094934|LOC285778|285778|uncharacterized LOC285778##BC017871|RPP40|10799|ribonuclease P/MRP 40kDa subunit##NM_006638|RPP40|10799|ribonuclease P/MRP 40kDa subunit	0.134546	
chr9	112282881	112283027	reg1016916.p1	8.729	+	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	-22365	-	BX648253 NM_001145369 NM_001145370	-69291	-	AK296265 AK296388 AK316118 NM_001145371 NM_001145372	-91741	-	BC039306 NM_001037293 AK095003	120115	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	259661	+	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	527955	+	BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BX648253|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145369|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145370|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2	0.977095	CTCF.p2:2:0.977
chr6	135744898	135745047	reg1016825.p1	8.728	+	TSC_hg19_v1_chr6_+_135517056 X17469	-227883	+	TSC_hg19_v1_chr6_+_135516916 AJ616799	-228066	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	-242386	+	AY133243 TSC_hg19_v1_chr6_-_135818858 DQ090887	73853	-	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	73913	-	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	73992	+	X17469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY133243|AHI1|54806|Abelson helper integration site 1##DQ090887|AHI1|54806|Abelson helper integration site 1##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271	0.369282	CTCF.p2:16:0.369
chr10	32496556	32496648	reg1010874.p1	8.727	+	TSC_hg19_v1_chr10_-_32345341 NM_004521	-151242	-	TSC_hg19_v1_chr10_-_32345335 BC080604 BC010885 BC111042 AK289413 AK299542 BC065267 AK307502	-151288	-	BC126279 BC126281 TSC_hg19_v1_chr10_-_32345152 X65873	-151434	-	CU691366 TSC_hg19_v1_chr10_-_32636082 AK092304 AX747467 AK309822	139360	-	TSC_hg19_v1_chr10_-_32636116 AF277374 FJ230887 NM_025209	139506	-	TSC_hg19_v1_chr10_-_32636137 BC036529 CR749375	139547	-	NM_004521|KIF5B|3799|kinesin family member 5B##BC080604|KIF5B|3799|kinesin family member 5B##BC010885|KIF5B|3799|kinesin family member 5B##BC111042|KIF5B|3799|kinesin family member 5B##AK289413|KIF5B|3799|kinesin family member 5B##AK299542|KIF5B|3799|kinesin family member 5B##BC065267|KIF5B|3799|kinesin family member 5B##AK307502|KIF5B|3799|kinesin family member 5B##BC126279|KIF5B|3799|kinesin family member 5B##BC126281|KIF5B|3799|kinesin family member 5B##X65873|KIF5B|3799|kinesin family member 5B##AK092304|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AK309822|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AF277374|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##NM_025209|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##BC036529|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##CR749375|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)	0.445473	CTCF.p2:8:0.445
chr15	89954843	89954995	reg1013997.p1	8.727	+	TSC_hg19_v1_chr15_-_89878042 AK291281	-76876	-	BC050559 BC042571 NM_001126131 NM_002693 X98093 TSC_hg19_v1_chr15_-_89878036	-76898	-	TSC_hg19_v1_chr15_+_89787255 AK055176 BC140769 BC144483 BC004277	-167669	+	CU689056 AY257182 AF193809 NM_016321 BC015461 AK298252 AK298641 AF081497 AK301640 AK313238 BC030965 AK290899 AK310222	84876	-	TSC_hg19_v1_chr15_+_90118742 GQ227787 NM_152259	163859	+	TSC_hg19_v1_chr15_-_90198681 BC042063 NM_198525	243701	-	AK291281|POLG|5428|polymerase (DNA directed), gamma##BC050559|POLG|5428|polymerase (DNA directed), gamma##BC042571|POLG|5428|polymerase (DNA directed), gamma##NM_001126131|POLG|5428|polymerase (DNA directed), gamma##NM_002693|POLG|5428|polymerase (DNA directed), gamma##X98093|POLG|5428|polymerase (DNA directed), gamma##AK055176|FANCI|55215|Fanconi anemia, complementation group I##BC140769|FANCI|55215|Fanconi anemia, complementation group I##BC144483|FANCI|55215|Fanconi anemia, complementation group I##BC004277|FANCI|55215|Fanconi anemia, complementation group I##AY257182|RHCG|51458|Rh family, C glycoprotein##AF193809|RHCG|51458|Rh family, C glycoprotein##NM_016321|RHCG|51458|Rh family, C glycoprotein##BC015461|RHCG|51458|Rh family, C glycoprotein##AK298252|RHCG|51458|Rh family, C glycoprotein##AK298641|RHCG|51458|Rh family, C glycoprotein##AF081497|RHCG|51458|Rh family, C glycoprotein##AK301640|RHCG|51458|Rh family, C glycoprotein##AK313238|RHCG|51458|Rh family, C glycoprotein##BC030965|RHCG|51458|Rh family, C glycoprotein##AK290899|RHCG|51458|Rh family, C glycoprotein##AK310222|RHCG|51458|Rh family, C glycoprotein##GQ227787|C15orf42|90381|chromosome 15 open reading frame 42##NM_152259|C15orf42|90381|chromosome 15 open reading frame 42##BC042063|KIF7|374654|kinesin family member 7##NM_198525|KIF7|374654|kinesin family member 7	0.766737	CTCF.p2:-31:0.767
chr1	64081629	64081776	reg1015014.p1	8.727	+	AK293298 NM_001172819 AK298505	-22188	+	TSC_hg19_v1_chr1_+_64059081 AK294186 BC019920 NM_002633 BC001756 BC067763 AK312254 M83088 BC090856 DQ890618 DQ893786 CU676478 BT006961	-22677	+	AK292220 NM_032437 AK092219 TSC_hg19_v1_chr1_+_63989242 AK315850 AB058702 BC015814	-92563	+	NM_001172818 AK300100	7191	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	157957	+	BC029895 NM_152489	587787	+	AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##AK294186|PGM1|5236|phosphoglucomutase 1##BC019920|PGM1|5236|phosphoglucomutase 1##NM_002633|PGM1|5236|phosphoglucomutase 1##BC001756|PGM1|5236|phosphoglucomutase 1##BC067763|PGM1|5236|phosphoglucomutase 1##AK312254|PGM1|5236|phosphoglucomutase 1##M83088|PGM1|5236|phosphoglucomutase 1##BC090856|PGM1|5236|phosphoglucomutase 1##DQ890618|PGM1|5236|phosphoglucomutase 1##DQ893786|PGM1|5236|phosphoglucomutase 1##BT006961|PGM1|5236|phosphoglucomutase 1##AK292220|EFCAB7|84455|EF-hand calcium binding domain 7##NM_032437|EFCAB7|84455|EF-hand calcium binding domain 7##AK092219|EFCAB7|84455|EF-hand calcium binding domain 7##AK315850|EFCAB7|84455|EF-hand calcium binding domain 7##AB058702|EFCAB7|84455|EF-hand calcium binding domain 7##BC015814|EFCAB7|84455|EF-hand calcium binding domain 7##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)	0.993104	CTCF.p2:-13:0.993
chr16	84099250	84099385	reg1017086.p1	8.727	+	NM_001080442	-23556	-	TSC_hg19_v1_chr16_+_84002230 AY299331 NM_019065 BC131615 AK127376	-97105	+	NM_182981 TSC_hg19_v1_chr16_+_83986844 AK290383 AY258068 AY037158 BC020434 BC032476 BC093687 BC113417	-112433	+	TSC_hg19_v1_chr16_-_84150441 AK291773 BC114555 BC114961 AK299067	51095	-	TSC_hg19_v1_chr16_-_84150449 BC026330 D42053 NM_003791	51199	-	TSC_hg19_v1_chr16_+_84150646 BC052334	51334	+	NM_001080442|SLC38A8|146167|solute carrier family 38, member 8##AY299331|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_019065|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##BC131615|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##AK127376|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_182981|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK290383|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY258068|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY037158|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC020434|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC032476|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC093687|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC113417|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK291773|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114555|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114961|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##AK299067|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC026330|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##D42053|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##NM_003791|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC052334|LOC729887|729887|uncharacterized LOC729887	0.925765	CTCF.p2:14:0.926
chr4	170414192	170414312	reg1014604.p2	8.727	+	TSC_hg19_v1_chr4_-_170192202 NM_020870	-222032	-	AK021429 TSC_hg19_v1_chr4_-_170192108	-222145	-	TSC_hg19_v1_chr4_-_170192099 BC053671	-222205	-	BC015147 BC114491 AB067488 CR933642 AL050385 TSC_hg19_v1_chr4_-_170533735 BC068201 CR936672	119384	-	TSC_hg19_v1_chr4_-_170533762 NM_001199397 NM_001199398 NM_001199399 NM_001199400 NM_012224	119517	-	TSC_hg19_v1_chr4_+_170541683 NM_001243372 NM_001829 NM_173872	127419	+	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1##AK021429|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1##BC015147|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC114491|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AB067488|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR933642|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AL050385|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC068201|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR936672|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199397|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199398|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199399|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199400|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_012224|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001243372|CLCN3|1182|chloride channel 3##NM_001829|CLCN3|1182|chloride channel 3##NM_173872|CLCN3|1182|chloride channel 3	0.905603	CTCF.p2:-2:0.906
chr7	115763148	115763292	reg1016373.p1	8.727	+	TSC_hg19_v1_chr7_-_115670864 CR933605 NM_001018058 NM_012252	-92368	-	TSC_hg19_v1_chr7_-_115670820 AK313546	-92402	-	TSC_hg19_v1_chr7_-_115670796 D43945 BC029891	-92434	-	NM_015641 AK299104 TSC_hg19_v1_chr7_+_115850592 BC001451 AK021575 AK300546 AK309324 AK222840 AF245356 AJ250865 AK315644 AB529039 EU176352 EU176694	87433	+	AK310995 NM_152829 AK291802 AF245357	99799	+	TSC_hg19_v1_chr7_+_116139705 AY353255 BC005256 NM_001206747 NM_001233 NM_198212 AK310786 AK311964 AF035752 AB451285 AB451417 AB489180 AM393815 BT007051 CR407685	376507	+	CR933605|TFEC|22797|transcription factor EC##NM_001018058|TFEC|22797|transcription factor EC##NM_012252|TFEC|22797|transcription factor EC##AK313546|TFEC|22797|transcription factor EC##D43945|TFEC|22797|transcription factor EC##BC029891|TFEC|22797|transcription factor EC##NM_015641|TES|26136|testis derived transcript (3 LIM domains)##AK299104|TES|26136|testis derived transcript (3 LIM domains)##BC001451|TES|26136|testis derived transcript (3 LIM domains)##AK021575|TES|26136|testis derived transcript (3 LIM domains)##AK300546|TES|26136|testis derived transcript (3 LIM domains)##AK309324|TES|26136|testis derived transcript (3 LIM domains)##AK222840|TES|26136|testis derived transcript (3 LIM domains)##AF245356|TES|26136|testis derived transcript (3 LIM domains)##AJ250865|TES|26136|testis derived transcript (3 LIM domains)##AK315644|TES|26136|testis derived transcript (3 LIM domains)##EU176352|TES|26136|testis derived transcript (3 LIM domains)##EU176694|TES|26136|testis derived transcript (3 LIM domains)##AK310995|TES|26136|testis derived transcript (3 LIM domains)##NM_152829|TES|26136|testis derived transcript (3 LIM domains)##AK291802|TES|26136|testis derived transcript (3 LIM domains)##AF245357|TES|26136|testis derived transcript (3 LIM domains)##AY353255|CAV2|858|caveolin 2##BC005256|CAV2|858|caveolin 2##NM_001206747|CAV2|858|caveolin 2##NM_001233|CAV2|858|caveolin 2##NM_198212|CAV2|858|caveolin 2##AK310786|CAV2|858|caveolin 2##AK311964|CAV2|858|caveolin 2##AF035752|CAV2|858|caveolin 2##AB451285|CAV2|858|caveolin 2##AB451417|CAV2|858|caveolin 2##AM393815|CAV2|858|caveolin 2##BT007051|CAV2|858|caveolin 2##CR407685|CAV2|858|caveolin 2	0.918003	CTCF.p2:16:0.918
chr8	131219959	131220112	reg1014884.p1	8.727	+	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-191152	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-191341	-	BC016345 TSC_hg19_v1_chr8_-_131028667	-191376	-	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	235996	-	NM_001115	832799	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1696322	+	AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B##NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.038098	
chr4	75242740	75242853	reg1015551.p1	8.726	+	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	-11856	+	AK289455 BC127938 BC127939 DQ235269 AY358920 NM_001013442 DQ235264 DQ235265 DQ235266 DQ235267 DQ235268	-68577	+	TSC_hg19_v1_chr4_+_75023834 AX794782 BC037529 NM_001144978 BC041943 AX794779	-218931	+	BC009799 M30704 NM_001657	68056	+	BC009799 M30704 NM_001657	237832	+	BC011618 S55606 AB109441 NM_001729	476987	-	AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin##AK289455|EPGN|255324|epithelial mitogen homolog (mouse)##BC127938|EPGN|255324|epithelial mitogen homolog (mouse)##BC127939|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235269|EPGN|255324|epithelial mitogen homolog (mouse)##AY358920|EPGN|255324|epithelial mitogen homolog (mouse)##NM_001013442|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235264|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235265|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235266|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235267|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235268|EPGN|255324|epithelial mitogen homolog (mouse)##BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin	0.990217	CTCF.p2:-6:0.990
chr18	14415930	14416040	reg1017900.p1	8.725	+	TSC_hg19_v1_chr18_+_14179298 BC127726	-236676	+	BC010705 AK096748 BC024227 BC037787 NM_145287	-283528	-	AK315319 BC094710 NM_000529 AK289381	-500449	-	BC140940 BX649118 AK307658 NM_001137671	127559	-	AF269088 NM_001145029 BC028407	332300	+	TSC_hg19_v1_chr18_-_18691640 AK307388	4275653	-	BC127726|ANKRD20A5P|440482|ankyrin repeat domain 20 family, member A5, pseudogene##BC010705|ZNF519|162655|zinc finger protein 519##AK096748|ZNF519|162655|zinc finger protein 519##BC024227|ZNF519|162655|zinc finger protein 519##BC037787|ZNF519|162655|zinc finger protein 519##NM_145287|ZNF519|162655|zinc finger protein 519##AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC140940|POTEC|388468|POTE ankyrin domain family, member C##BX649118|POTEC|388468|POTE ankyrin domain family, member C##AK307658|POTEC|388468|POTE ankyrin domain family, member C##NM_001137671|POTEC|388468|POTE ankyrin domain family, member C##AF269088|ANKRD30B|374860|ankyrin repeat domain 30B##NM_001145029|ANKRD30B|374860|ankyrin repeat domain 30B##BC028407|ANKRD30B|374860|ankyrin repeat domain 30B##AK307388|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1	0.947197	CTCF.p2:4:0.947
chr3	22130840	22130971	reg1015701.p1	8.725	+	AK026072 NM_024697	-338090	-	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-1903231	-	BC070075 TSC_hg19_v1_chr3_+_20081907 BC060823 AB527402	-2048995	+	AK310298 TSC_hg19_v1_chr3_-_22414124	283229	-	TSC_hg19_v1_chr3_+_23244600 AK307075	1113678	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	1113850	+	AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC070075|KAT2B|8850|K(lysine) acetyltransferase 2B##BC060823|KAT2B|8850|K(lysine) acetyltransferase 2B##AK310298|ZNF385D|79750|zinc finger protein 385D##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2	0.996083	CTCF.p2:-18:0.996
chr4	56602933	56603037	reg1014169.p2	8.725	+	DQ891295 DQ894479 BC012908 NM_006681 X76029 TSC_hg19_v1_chr4_-_56502465	-100573	-	BC034431 NM_152401	-144607	-	TSC_hg19_v1_chr4_-_56412988 BC126157 BC126159 AF011568 NM_004898 AK291708 AK223549	-189994	-	TSC_hg19_v1_chr4_+_56719840 BC094751 NM_001024924 NM_018261 NM_178237 AK001755 AK027413	116880	+	AK023683 NM_025009 TSC_hg19_v1_chr4_+_56815093 BC136535 BC136536	212106	+	AK126014 NM_020722	433375	+	DQ891295|NMU|10874|neuromedin U##DQ894479|NMU|10874|neuromedin U##BC012908|NMU|10874|neuromedin U##NM_006681|NMU|10874|neuromedin U##X76029|NMU|10874|neuromedin U##BC034431|PDCL2|132954|phosducin-like 2##NM_152401|PDCL2|132954|phosducin-like 2##BC126157|CLOCK|9575|clock homolog (mouse)##BC126159|CLOCK|9575|clock homolog (mouse)##AF011568|CLOCK|9575|clock homolog (mouse)##NM_004898|CLOCK|9575|clock homolog (mouse)##AK291708|CLOCK|9575|clock homolog (mouse)##AK223549|CLOCK|9575|clock homolog (mouse)##BC094751|EXOC1|55763|exocyst complex component 1##NM_001024924|EXOC1|55763|exocyst complex component 1##NM_018261|EXOC1|55763|exocyst complex component 1##NM_178237|EXOC1|55763|exocyst complex component 1##AK001755|EXOC1|55763|exocyst complex component 1##AK027413|EXOC1|55763|exocyst complex component 1##AK023683|CEP135|9662|centrosomal protein 135kDa##NM_025009|CEP135|9662|centrosomal protein 135kDa##BC136535|CEP135|9662|centrosomal protein 135kDa##BC136536|CEP135|9662|centrosomal protein 135kDa##AK126014|KIAA1211|57482|KIAA1211##NM_020722|KIAA1211|57482|KIAA1211	0.946407	CTCF.p2:2:0.946
chr12	49371855	49371981	reg1015106.p2	8.724	+	U81787 NM_003394 AK312906	-6320	-	TSC_hg19_v1_chr12_-_49351310 M74491	-20614	-	TSC_hg19_v1_chr12_-_49351269 AK300080	-20652	-	NM_005430	317	+	AB527129 AB018292 BC136398 BC136399 TSC_hg19_v1_chr12_-_49393076 NM_015086 BC039264	21082	-	TSC_hg19_v1_chr12_-_49412538 AK293332 NM_001206710 AK303276 AK307994 AK310250 BC000358 AK097606 NM_001206709 NM_002733	40653	-	U81787|WNT10B|7480|wingless-type MMTV integration site family, member 10B##NM_003394|WNT10B|7480|wingless-type MMTV integration site family, member 10B##AK312906|WNT10B|7480|wingless-type MMTV integration site family, member 10B##M74491|ARF3|377|ADP-ribosylation factor 3##NM_005430|WNT1|7471|wingless-type MMTV integration site family, member 1##AB018292|DDN|23109|dendrin##BC136398|DDN|23109|dendrin##BC136399|DDN|23109|dendrin##NM_015086|DDN|23109|dendrin##BC039264|DDN|23109|dendrin##AK293332|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206710|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK303276|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK307994|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK310250|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##BC000358|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK097606|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206709|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_002733|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	0.922783	CTCF.p2:16:0.923
chr2	231067691	231067821	reg1014795.p1	8.724	+	BC065524 BC034382 AK055356 TSC_hg19_v1_chr2_-_230933641 NM_152527	-134090	-	TSC_hg19_v1_chr2_+_230787218 BC017869 BC022538 NM_174899 BC033935 AK289655 AK309702	-280539	+	TSC_hg19_v1_chr2_-_230786712 AK310971	-281007	-	AL832300 BC012447 AK026488 AF280094 AF280095 BC019059 NM_004509 NM_004510 NM_080424 TSC_hg19_v1_chr2_-_231084830	16959	-	AK301097 NM_001185015	22687	-	AK301317 AK301267 NM_001005176 NM_007237 U36499 U36500 U63420 BC105744 BC105960 BC105743 BC054890 BC070160 BC038091	22707	+	BC065524|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##BC034382|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##AK055356|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##NM_152527|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##BC017869|FBXO36|130888|F-box protein 36##BC022538|FBXO36|130888|F-box protein 36##NM_174899|FBXO36|130888|F-box protein 36##BC033935|FBXO36|130888|F-box protein 36##AK289655|FBXO36|130888|F-box protein 36##AK309702|FBXO36|130888|F-box protein 36##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12##AL832300|SP110|3431|SP110 nuclear body protein##BC012447|SP110|3431|SP110 nuclear body protein##AK026488|SP110|3431|SP110 nuclear body protein##AF280094|SP110|3431|SP110 nuclear body protein##AF280095|SP110|3431|SP110 nuclear body protein##BC019059|SP110|3431|SP110 nuclear body protein##NM_004509|SP110|3431|SP110 nuclear body protein##NM_004510|SP110|3431|SP110 nuclear body protein##NM_080424|SP110|3431|SP110 nuclear body protein##AK301097|SP110|3431|SP110 nuclear body protein##NM_001185015|SP110|3431|SP110 nuclear body protein##AK301317|SP140|11262|SP140 nuclear body protein##AK301267|SP140|11262|SP140 nuclear body protein##NM_001005176|SP140|11262|SP140 nuclear body protein##NM_007237|SP140|11262|SP140 nuclear body protein##U36499|SP140|11262|SP140 nuclear body protein##U36500|SP140|11262|SP140 nuclear body protein##U63420|SP140|11262|SP140 nuclear body protein##BC105744|SP140|11262|SP140 nuclear body protein##BC105960|SP140|11262|SP140 nuclear body protein##BC105743|SP140|11262|SP140 nuclear body protein##BC054890|SP140|11262|SP140 nuclear body protein##BC070160|SP140|11262|SP140 nuclear body protein##BC038091|SP140|11262|SP140 nuclear body protein	0.037292	
chr9	33170968	33171080	reg1014807.p2	8.724	+	NM_001497 TSC_hg19_v1_chr9_-_33167361	-3663	-	TSC_hg19_v1_chr9_-_33167335 BC045773	-3698	-	D29805 X13223 X14085 M22921 U10474 TSC_hg19_v1_chr9_-_33167262	-3777	-	TSC_hg19_v1_chr9_+_33240166 AF048700 BC110068 NM_014471	69156	+	AM392568 BC014774 TSC_hg19_v1_chr9_-_33264707 AK096038 AK316577 AF116273 BC002407 AK222749 AF022224 U46917 BC001936 Z35491 NM_001172415 NM_004323	93584	-	NM_001195536 NM_016410 TSC_hg19_v1_chr9_+_33265035 BC016698 BC007457 AK315455 AK024753 BC018603 BC021168 AK295744	93932	+	NM_001497|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##BC045773|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##D29805|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X13223|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X14085|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##M22921|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##U10474|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AF048700|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##BC110068|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##NM_014471|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##AM392568|BAG1|573|BCL2-associated athanogene##BC014774|BAG1|573|BCL2-associated athanogene##AK096038|BAG1|573|BCL2-associated athanogene##AK316577|BAG1|573|BCL2-associated athanogene##AF116273|BAG1|573|BCL2-associated athanogene##AK222749|BAG1|573|BCL2-associated athanogene##AF022224|BAG1|573|BCL2-associated athanogene##U46917|BAG1|573|BCL2-associated athanogene##BC001936|BAG1|573|BCL2-associated athanogene##Z35491|BAG1|573|BCL2-associated athanogene##NM_001172415|BAG1|573|BCL2-associated athanogene##NM_004323|BAG1|573|BCL2-associated athanogene##NM_001195536|CHMP5|51510|charged multivesicular body protein 5##NM_016410|CHMP5|51510|charged multivesicular body protein 5##BC016698|CHMP5|51510|charged multivesicular body protein 5##BC007457|CHMP5|51510|charged multivesicular body protein 5##AK315455|CHMP5|51510|charged multivesicular body protein 5##AK024753|CHMP5|51510|charged multivesicular body protein 5##BC018603|CHMP5|51510|charged multivesicular body protein 5##BC021168|CHMP5|51510|charged multivesicular body protein 5##AK295744|CHMP5|51510|charged multivesicular body protein 5	0.453889	CTCF.p2:6:0.454
chr2	47116290	47116377	reg1011202.p1	8.722	+	TSC_hg19_v1_chr2_+_46926340 BC032862 AF073958 NM_144949	-189932	+	TSC_hg19_v1_chr2_+_46926049 AK290194 AK296796 AB014571 AL136896 NM_014011	-190260	+	TSC_hg19_v1_chr2_+_46844353 NM_014171 AK291298 AF161488 BC018653 BC006980 BC006979	-271980	+	TSC_hg19_v1_chr2_-_47134945 M23161	18678	-	TSC_hg19_v1_chr2_-_47142893 AF475284 BC037845	26558	-	TSC_hg19_v1_chr2_-_47142934 BC040357	26601	-	BC032862|SOCS5|9655|suppressor of cytokine signaling 5##AF073958|SOCS5|9655|suppressor of cytokine signaling 5##NM_144949|SOCS5|9655|suppressor of cytokine signaling 5##AK290194|SOCS5|9655|suppressor of cytokine signaling 5##AB014571|SOCS5|9655|suppressor of cytokine signaling 5##AL136896|SOCS5|9655|suppressor of cytokine signaling 5##NM_014011|SOCS5|9655|suppressor of cytokine signaling 5##NM_014171|CRIPT|9419|cysteine-rich PDZ-binding protein##AK291298|CRIPT|9419|cysteine-rich PDZ-binding protein##AF161488|CRIPT|9419|cysteine-rich PDZ-binding protein##BC018653|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006980|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006979|CRIPT|9419|cysteine-rich PDZ-binding protein##M23161|MCFD2|90411|multiple coagulation factor deficiency 2##AF475284|MCFD2|90411|multiple coagulation factor deficiency 2##BC037845|MCFD2|90411|multiple coagulation factor deficiency 2##BC040357|MCFD2|90411|multiple coagulation factor deficiency 2	0.97276	CTCF.p2:16:0.973
chr3	139281057	139281193	reg1017397.p1	8.722	+	TSC_hg19_v1_chr3_-_139258531 AK301684 AK309492 NM_001130992 NM_001130993 NM_002899	-22525	-	AK290315 AK307378 TSC_hg19_v1_chr3_-_139258479 M11433	-22642	-	AB464149 CR541979 CR542005 EU831403 EU831495 BC121052 M36809 TSC_hg19_v1_chr3_-_139258472	-22703	-	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	115703	-	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	372893	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	373127	+	AK309492|RBP1|5947|retinol binding protein 1, cellular##NM_001130992|RBP1|5947|retinol binding protein 1, cellular##NM_001130993|RBP1|5947|retinol binding protein 1, cellular##NM_002899|RBP1|5947|retinol binding protein 1, cellular##AK290315|RBP1|5947|retinol binding protein 1, cellular##M11433|RBP1|5947|retinol binding protein 1, cellular##CR541979|RBP1|5947|retinol binding protein 1, cellular##CR542005|RBP1|5947|retinol binding protein 1, cellular##EU831403|RBP1|5947|retinol binding protein 1, cellular##EU831495|RBP1|5947|retinol binding protein 1, cellular##BC121052|RBP1|5947|retinol binding protein 1, cellular##M36809|RBP1|5947|retinol binding protein 1, cellular##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2	0.172433	
chr1	211308812	211308934	reg1014983.p1	8.720	+	AF078741 AF078742 BC113709 BC143599 TSC_hg19_v1_chr1_-_211307437 AJ001366 NM_002238 NM_172362	-1488	-	NM_001170580 BC051191	-806232	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	-806608	+	TSC_hg19_v1_chr1_+_211432710 NM_001136223 NM_001136224 NM_001136225	123835	+	TSC_hg19_v1_chr1_+_211432726 AK131312	123854	+	TSC_hg19_v1_chr1_+_211432740 AK300942 AK302664	123880	+	AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_001170580|HHAT|55733|hedgehog acyltransferase##BC051191|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase##NM_001136223|RCOR3|55758|REST corepressor 3##NM_001136224|RCOR3|55758|REST corepressor 3##NM_001136225|RCOR3|55758|REST corepressor 3##AK131312|RCOR3|55758|REST corepressor 3##AK300942|RCOR3|55758|REST corepressor 3##AK302664|RCOR3|55758|REST corepressor 3	0.116761	
chr12	298363	298506	reg1017776.p1	8.720	+	AK091953 AX747275 NM_015232	-111893	+	TSC_hg19_v1_chr12_+_175945 BC024764 NM_001170738	-122474	+	None	None	None	NM_003044 BC036838 BC026339 NM_001122847	24303	-	AK307167 AK313690 NM_001122848 NM_001206931	24878	-	AK313511 AF462445 AK295904 AK296127 AK296209 BC020867 BC022392 NM_001190997 NM_001243392 NM_016615	73582	-	AK091953|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_015232|IQSEC3|440073|IQ motif and Sec7 domain 3##BC024764|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_001170738|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_003044|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC036838|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC026339|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001122847|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK307167|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK313690|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001122848|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001206931|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK313511|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AF462445|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK295904|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK296127|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK296209|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##BC020867|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##BC022392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_001190997|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_001243392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_016615|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	0.759283	CTCF.p2:3:0.759
chr16	2244994	2245094	reg1016109.p1	8.720	+	TSC_hg19_v1_chr16_+_2205810 AY569455	-39217	+	TSC_hg19_v1_chr16_+_2205783 AK090624 AX746540 NM_032271	-39263	+	TSC_hg19_v1_chr16_+_2198707 BC007681	-46299	+	NM_020764 AF451977	1449	-	NM_001199173 NM_001199175 NM_022372 AK021536 AK098762	10165	+	AY223837 TSC_hg19_v1_chr16_+_2255454 AK304390 AK302201 BC088354 BC052292 BC001313 BC020499	10419	+	AY569455|TRAF7|84231|TNF receptor-associated factor 7##AK090624|TRAF7|84231|TNF receptor-associated factor 7##NM_032271|TRAF7|84231|TNF receptor-associated factor 7##BC007681|RAB26|25837|RAB26, member RAS oncogene family##NM_020764|CASKIN1|57524|CASK interacting protein 1##AF451977|CASKIN1|57524|CASK interacting protein 1##NM_001199173|MLST8|64223|MTOR associated protein, LST8 homolog (S. cerevisiae)##NM_001199175|MLST8|64223|MTOR associated protein, LST8 homolog (S. cerevisiae)##NM_022372|MLST8|64223|MTOR associated protein, LST8 homolog (S. cerevisiae)##AK021536|MLST8|64223|MTOR associated protein, LST8 homolog (S. cerevisiae)##AK098762|MLST8|64223|MTOR associated protein, LST8 homolog (S. cerevisiae)##AY223837|MLST8|64223|MTOR associated protein, LST8 homolog (S. cerevisiae)##AK304390|MLST8|64223|MTOR associated protein, LST8 homolog (S. cerevisiae)##AK302201|MLST8|64223|MTOR associated protein, LST8 homolog (S. cerevisiae)##BC088354|MLST8|64223|MTOR associated protein, LST8 homolog (S. cerevisiae)##BC052292|MLST8|64223|MTOR associated protein, LST8 homolog (S. cerevisiae)##BC001313|MLST8|64223|MTOR associated protein, LST8 homolog (S. cerevisiae)##BC020499|MLST8|64223|MTOR associated protein, LST8 homolog (S. cerevisiae)	0.967891	CTCF.p2:-2:0.968
chr17_ctg5_hap1	1680580	1680676	reg1012723.p1	8.720	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.996015	CTCF.p2:-8:0.996
chr8	52927015	52927154	reg1015393.p1	8.720	+	AK299452 TSC_hg19_v1_chr8_+_52812239	-114861	+	TSC_hg19_v1_chr8_-_52811724 NM_052937	-115357	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	-115482	-	BC026316 AB011107 AK311188 BC031075 NM_014682 BC025662	395236	-	BC130641 BC130643 BC144534 AY358213 NM_207413	550909	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	699902	-	NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC130641|FAM150A|389658|family with sequence similarity 150, member A##BC130643|FAM150A|389658|family with sequence similarity 150, member A##BC144534|FAM150A|389658|family with sequence similarity 150, member A##AY358213|FAM150A|389658|family with sequence similarity 150, member A##NM_207413|FAM150A|389658|family with sequence similarity 150, member A##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1	0.465377	CTCF.p2:-21:0.465
chrX	10566052	10566152	reg1015538.p1	8.720	+	AF035360 NM_001193277 AY112903	-21198	-	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	-30543	-	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	-441048	+	AF230976 AF230977 Y13667 AK226104 AK315095 BC053626 AK291215 TSC_hg19_v1_chrX_-_10588583 AY112901 AK297205 NM_000381 NM_033289	22463	-	AF041206 NM_001098624 AK299061	79654	-	NM_033290	285706	-	AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112903|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##AF230976|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF230977|MID1|4281|midline 1 (Opitz/BBB syndrome)##Y13667|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK226104|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK315095|MID1|4281|midline 1 (Opitz/BBB syndrome)##BC053626|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK291215|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112901|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK297205|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_000381|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_033289|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_033290|MID1|4281|midline 1 (Opitz/BBB syndrome)	0.900388	CTCF.p2:5:0.900
chr1	185529113	185529264	reg1016626.p1	8.719	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-242718	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-242869	-	TSC_hg19_v1_chr1_+_185126418 AK291443	-402792	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	174388	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	736219	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	815069	-	NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)	0.992875	CTCF.p2:-11:0.993
chr2	46769035	46769146	reg1012984.p1	8.719	+	BC034808 NM_080653	-21995	-	NM_001145051	-62387	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	-244115	+	TSC_hg19_v1_chr2_+_46769874 NM_012249 AK095329	759	+	TSC_hg19_v1_chr2_+_46769905 BC056154 BC070485 BC065291 BC093805 BC101806 AF498976 M31470 AB528045	948	+	BC010864 D13435 TSC_hg19_v1_chr2_-_46844167 BC039303	75072	-	BC034808|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_080653|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_012249|RHOQ|23433|ras homolog gene family, member Q##AK095329|RHOQ|23433|ras homolog gene family, member Q##BC056154|RHOQ|23433|ras homolog gene family, member Q##BC070485|RHOQ|23433|ras homolog gene family, member Q##BC065291|RHOQ|23433|ras homolog gene family, member Q##BC093805|RHOQ|23433|ras homolog gene family, member Q##BC101806|RHOQ|23433|ras homolog gene family, member Q##AF498976|RHOQ|23433|ras homolog gene family, member Q##M31470|RHOQ|23433|ras homolog gene family, member Q##D13435|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F	0.986464	CTCF.p2:-2:0.986
chr10	6128497	6128607	reg1013157.p1	8.718	+	AB528862 AK223313 K03122 X01057 AK313847 NM_000417	-24330	-	AF035279 BC107777 BC065506 NM_001243539	-108538	-	CR542023 HQ401283 AB590464 BC121140 AK304211 BC074726 BC121141 U31628 NM_002189 NM_172200	-109039	-	TSC_hg19_v1_chr10_+_6130954 NM_032905	2397	+	TSC_hg19_v1_chr10_+_6131024 AF542550 AK314952	2447	+	TSC_hg19_v1_chr10_+_6131035 BC007871 BC039322 NM_001145547	2619	+	AK223313|IL2RA|3559|interleukin 2 receptor, alpha##K03122|IL2RA|3559|interleukin 2 receptor, alpha##X01057|IL2RA|3559|interleukin 2 receptor, alpha##AK313847|IL2RA|3559|interleukin 2 receptor, alpha##NM_000417|IL2RA|3559|interleukin 2 receptor, alpha##AF035279|IL15RA|3601|interleukin 15 receptor, alpha##BC107777|IL15RA|3601|interleukin 15 receptor, alpha##BC065506|IL15RA|3601|interleukin 15 receptor, alpha##NM_001243539|IL15RA|3601|interleukin 15 receptor, alpha##CR542023|IL15RA|3601|interleukin 15 receptor, alpha##HQ401283|IL15RA|3601|interleukin 15 receptor, alpha##BC121140|IL15RA|3601|interleukin 15 receptor, alpha##AK304211|IL15RA|3601|interleukin 15 receptor, alpha##BC074726|IL15RA|3601|interleukin 15 receptor, alpha##BC121141|IL15RA|3601|interleukin 15 receptor, alpha##U31628|IL15RA|3601|interleukin 15 receptor, alpha##NM_002189|IL15RA|3601|interleukin 15 receptor, alpha##NM_172200|IL15RA|3601|interleukin 15 receptor, alpha##NM_032905|RBM17|84991|RNA binding motif protein 17##AF542550|RBM17|84991|RNA binding motif protein 17##AK314952|RBM17|84991|RNA binding motif protein 17##BC007871|RBM17|84991|RNA binding motif protein 17##BC039322|RBM17|84991|RNA binding motif protein 17##NM_001145547|RBM17|84991|RNA binding motif protein 17	0.286324	CTCF.p2:-7:0.286
chr12	56050248	56050400	reg1015934.p1	8.717	+	BC136914 AB529283 NM_206899	-19665	+	BC137000 BC137001 NM_001005494	-105328	+	NM_001005519	-164163	+	AK290112 NM_152637 TSC_hg19_v1_chr12_+_56075356	25019	+	BC020509 TSC_hg19_v1_chr12_+_56075425 AY358508	25115	+	AF052050 AF072132 AY358882 TSC_hg19_v1_chr12_-_56101636 AF032108 AB210036	51236	-	BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1##NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1##BC137000|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##BC137001|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##NM_001005494|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68##AK290112|METTL7B|196410|methyltransferase like 7B##NM_152637|METTL7B|196410|methyltransferase like 7B##BC020509|METTL7B|196410|methyltransferase like 7B##AY358508|METTL7B|196410|methyltransferase like 7B##AF052050|ITGA7|3679|integrin, alpha 7##AF072132|ITGA7|3679|integrin, alpha 7##AY358882|ITGA7|3679|integrin, alpha 7##AF032108|ITGA7|3679|integrin, alpha 7##AB210036|ITGA7|3679|integrin, alpha 7	0.262963	CTCF.p2:10:0.263
chr12	65196125	65196232	reg1014770.p2	8.717	+	TSC_hg19_v1_chr12_-_65153217 NM_002076	-42968	-	AK223484 AK302443 TSC_hg19_v1_chr12_-_65153187 AK296759 AK300350 AK304158 AK308094 BC012482	-42994	-	TSC_hg19_v1_chr12_-_65153163 AK308454 AK291771	-43019	-	NM_015279 TSC_hg19_v1_chr12_+_65218409 AK055404	22205	+	TSC_hg19_v1_chr12_+_65218446 AK299508	22266	+	AB527171 TSC_hg19_v1_chr12_+_65224283	28070	+	NM_002076|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK223484|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK302443|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK296759|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK300350|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK304158|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK308094|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##BC012482|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK308454|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK291771|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##NM_015279|TBC1D30|23329|TBC1 domain family, member 30##AK055404|TBC1D30|23329|TBC1 domain family, member 30##AK299508|TBC1D30|23329|TBC1 domain family, member 30	0.999317	CTCF.p2:1:0.999
chr14	64977919	64978028	reg1014954.p2	8.717	+	TSC_hg19_v1_chr14_+_64971513 AK291743	-6450	+	TSC_hg19_v1_chr14_+_64971443 AB023214	-6530	+	TSC_hg19_v1_chr14_+_64971227 BX248777 NM_001123329 NM_014950	-6715	+	TSC_hg19_v1_chr14_+_65007187 NM_021979	29261	+	TSC_hg19_v1_chr14_+_65007458 AK097824 BC036107 BC034365 AB527255 BT009815 CU674866 DQ892538 DQ895749	29519	+	TSC_hg19_v1_chr14_+_65016678 AK058044 NM_172365 BC068989	38672	+	AK291743|ZBTB1|22890|zinc finger and BTB domain containing 1##AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1##BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_021979|HSPA2|3306|heat shock 70kDa protein 2##AK097824|HSPA2|3306|heat shock 70kDa protein 2##BC036107|HSPA2|3306|heat shock 70kDa protein 2##BC034365|HSPA2|3306|heat shock 70kDa protein 2##BT009815|HSPA2|3306|heat shock 70kDa protein 2##DQ892538|HSPA2|3306|heat shock 70kDa protein 2##DQ895749|HSPA2|3306|heat shock 70kDa protein 2##AK058044|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##NM_172365|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##BC068989|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36	0.999883	CTCF.p2:0:1.000
chr20	30249424	30249574	reg1014894.p1	8.717	+	AF257180 NM_032609 BC057779	-23797	+	TSC_hg19_v1_chr20_+_30193091 NM_002165 NM_181353 AK313786 BC012420 BC000613 S78986 X77956 AK291152 D13889 D13890 S78825 AB463776 CU680316 DQ891293 DQ893342 DQ894477 DQ896657 EU176458 EU176468 EU176808 BT007443	-56363	+	TSC_hg19_v1_chr20_+_30135200 BC053868	-114265	+	BC032024 TSC_hg19_v1_chr20_-_30288101	38598	-	TSC_hg19_v1_chr20_-_30310672 AY263336 BC019307 NM_001191 NM_138578 AK290968 AY263335 CR936637	61167	-	TSC_hg19_v1_chr20_-_30311772 BX647525	62241	-	AF257180|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_032609|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##BC057779|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_002165|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##NM_181353|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK313786|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC012420|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC000613|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78986|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##X77956|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK291152|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13889|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13890|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78825|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ891293|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ893342|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ894477|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ896657|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176458|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176468|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176808|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BT007443|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AY263336|BCL2L1|598|BCL2-like 1##BC019307|BCL2L1|598|BCL2-like 1##NM_001191|BCL2L1|598|BCL2-like 1##NM_138578|BCL2L1|598|BCL2-like 1##AK290968|BCL2L1|598|BCL2-like 1##AY263335|BCL2L1|598|BCL2-like 1##CR936637|BCL2L1|598|BCL2-like 1##BX647525|BCL2L1|598|BCL2-like 1	0.999952	CTCF.p2:28:1.000
chr2	120932713	120932862	reg1014861.p2	8.717	+	TSC_hg19_v1_chr2_+_120770652 AK023019 BC054508 AK290895 BC032822 NM_001184938	-162054	+	TSC_hg19_v1_chr2_+_120770604 NM_001184937 NM_001184939 NM_020909	-162184	+	M68941 NM_002830 TSC_hg19_v1_chr2_+_120517497 AK314836 BC010674	-415387	+	TSC_hg19_v1_chr2_-_120980957 BC016849 AK289880 BC080607 AK024632	48150	-	TSC_hg19_v1_chr2_-_120980977 AF530474 NM_024121	48211	-	NM_002881 TSC_hg19_v1_chr2_+_121010418	77633	+	AK023019|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC054508|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK290895|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC032822|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184938|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184937|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184939|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_020909|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC016849|TMEM185B|79134|transmembrane protein 185B##BC080607|TMEM185B|79134|transmembrane protein 185B##AK024632|TMEM185B|79134|transmembrane protein 185B##AF530474|TMEM185B|79134|transmembrane protein 185B##NM_024121|TMEM185B|79134|transmembrane protein 185B##NM_002881|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)	0.652866	CTCF.p2:0:0.653
chr10	5426090	5426226	reg1014408.p1	8.716	+	NM_053049 BC100867 BC100868 BC100869 BC100870	-19144	+	AK314988 BC020744 NM_001818 TSC_hg19_v1_chr10_+_5238799 S68287 AB031085 AB045829 CU676682 DQ891424 DQ894598 M33375 D26125	-187363	+	BC019230 TSC_hg19_v1_chr10_+_5136613 S68288 AF149416 AM392923 BT007286 CU674730 CU676394 DQ890679 DQ893860 GQ129450 GQ129451	-289525	+	TSC_hg19_v1_chr10_-_5446792 BC098247 BC099716 BC105634 AK296616 AK025318 NM_001171864 NM_024803	20630	-	TSC_hg19_v1_chr10_+_5454547 NM_001047160 AK299335 BC053553 S82401 AB587387 CU690984	28427	+	TSC_hg19_v1_chr10_+_5488571 NM_005863 AK294244 AK304028 AK315566 AK024919 AJ010046 BC010285 CU679671	62465	+	NM_053049|UCN3|114131|urocortin 3 (stresscopin)##BC100867|UCN3|114131|urocortin 3 (stresscopin)##BC100868|UCN3|114131|urocortin 3 (stresscopin)##BC100869|UCN3|114131|urocortin 3 (stresscopin)##BC100870|UCN3|114131|urocortin 3 (stresscopin)##AK314988|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##BC020744|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##NM_001818|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##S68287|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##AB031085|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##AB045829|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##DQ891424|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##DQ894598|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##M33375|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##D26125|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##BC019230|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68288|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AF149416|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AM392923|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##BT007286|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##DQ890679|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##DQ893860|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##GQ129450|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##GQ129451|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##BC098247|TUBAL3|79861|tubulin, alpha-like 3##BC099716|TUBAL3|79861|tubulin, alpha-like 3##BC105634|TUBAL3|79861|tubulin, alpha-like 3##AK296616|TUBAL3|79861|tubulin, alpha-like 3##AK025318|TUBAL3|79861|tubulin, alpha-like 3##NM_001171864|TUBAL3|79861|tubulin, alpha-like 3##NM_024803|TUBAL3|79861|tubulin, alpha-like 3##NM_001047160|NET1|10276|neuroepithelial cell transforming 1##AK299335|NET1|10276|neuroepithelial cell transforming 1##BC053553|NET1|10276|neuroepithelial cell transforming 1##S82401|NET1|10276|neuroepithelial cell transforming 1##NM_005863|NET1|10276|neuroepithelial cell transforming 1##AK294244|NET1|10276|neuroepithelial cell transforming 1##AK304028|NET1|10276|neuroepithelial cell transforming 1##AK315566|NET1|10276|neuroepithelial cell transforming 1##AK024919|NET1|10276|neuroepithelial cell transforming 1##AJ010046|NET1|10276|neuroepithelial cell transforming 1##BC010285|NET1|10276|neuroepithelial cell transforming 1	0.987804	CTCF.p2:12:0.988
chrX	131360321	131360443	reg1016786.p1	8.716	+	BC035382 TSC_hg19_v1_chrX_-_131353476 AK310997	-6881	-	TSC_hg19_v1_chrX_+_131352259 AK095439	-7955	+	TSC_hg19_v1_chrX_-_131352063 BC051467 AY298955 NM_021183	-8322	-	AY372211 AK002178 NM_001170701 NM_001170702 AK300248 NM_001170703	187203	-	AF491305 EU446986 BC074775 BC074776 AB077698 AB077699 AF467070 AJ427918 AJ427919 AY072692 NM_018388 NM_133486	213295	-	BC042090 NM_001170704 TSC_hg19_v1_chrX_-_131624064	263651	-	BC035382|RAP2C|57826|RAP2C, member of RAS oncogene family##AK310997|RAP2C|57826|RAP2C, member of RAS oncogene family##BC051467|RAP2C|57826|RAP2C, member of RAS oncogene family##AY298955|RAP2C|57826|RAP2C, member of RAS oncogene family##NM_021183|RAP2C|57826|RAP2C, member of RAS oncogene family##AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)##EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)	0.254335	CTCF.p2:-9:0.254
chrX	18428275	18428398	reg1013929.p1	8.716	+	Y18004 BC051913 TSC_hg19_v1_chrX_-_18372809 BC064617 AK303064 AK315116 BC040497 NM_006089	-55526	-	DQ892470 DQ895683 BC096745 BC037301 AK128155 NM_001184767 NM_153346	-189388	-	AK056214 AK298873 AK314631 NM_001172732 NM_001172739 NM_001172743 NM_021785	-548931	-	BC010966 TSC_hg19_v1_chrX_+_18443727 NM_003159 AK307444 AY217744 Y15057	15393	+	BC036091 NM_001037343	32007	+	AB464151 AF014459 DQ426892 NM_000330	261868	-	Y18004|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC051913|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC064617|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK303064|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK315116|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC040497|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##NM_006089|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##DQ892470|BEND2|139105|BEN domain containing 2##DQ895683|BEND2|139105|BEN domain containing 2##BC096745|BEND2|139105|BEN domain containing 2##BC037301|BEND2|139105|BEN domain containing 2##AK128155|BEND2|139105|BEN domain containing 2##NM_001184767|BEND2|139105|BEN domain containing 2##NM_153346|BEND2|139105|BEN domain containing 2##AK056214|RAI2|10742|retinoic acid induced 2##AK298873|RAI2|10742|retinoic acid induced 2##AK314631|RAI2|10742|retinoic acid induced 2##NM_001172732|RAI2|10742|retinoic acid induced 2##NM_001172739|RAI2|10742|retinoic acid induced 2##NM_001172743|RAI2|10742|retinoic acid induced 2##NM_021785|RAI2|10742|retinoic acid induced 2##BC010966|CDKL5|6792|cyclin-dependent kinase-like 5##NM_003159|CDKL5|6792|cyclin-dependent kinase-like 5##AK307444|CDKL5|6792|cyclin-dependent kinase-like 5##AY217744|CDKL5|6792|cyclin-dependent kinase-like 5##Y15057|CDKL5|6792|cyclin-dependent kinase-like 5##BC036091|CDKL5|6792|cyclin-dependent kinase-like 5##NM_001037343|CDKL5|6792|cyclin-dependent kinase-like 5##AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1	0.0	
chr5	89825993	89826135	reg1012341.p2	8.715	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-698	-	NM_006467 AK295434 U93868	-55362	+	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	-55486	-	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	28550	+	AK091866 TSC_hg19_v1_chr5_-_90610220	784181	-	TSC_hg19_v1_chr5_+_90676181 BC043415	850098	+	BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716	0.027812	
chrX	96940883	96941001	reg1016455.p1	8.715	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	-801972	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	-1000988	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	-1001191	+	EF676096 NM_001105243 NM_001184880 NM_020766 TSC_hg19_v1_chrX_-_99665272	2724331	-	NM_022144 AF191770 BC034030 AF291656 AF234259 AY358706 AB055421 AB590911 CU689814	2898959	+	BT006977 CR457115 AB527646 DQ890668 DQ893849 TSC_hg19_v1_chrX_-_99891804 AF053453 AK299176 AF133426 AK309581 AY358825 AB097016 AF043906 U84895 BC012389 NM_003270 AK075072 AB209876 AK315773 AK300852	2950826	-	NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##EF676096|PCDH19|57526|protocadherin 19##NM_001105243|PCDH19|57526|protocadherin 19##NM_001184880|PCDH19|57526|protocadherin 19##NM_020766|PCDH19|57526|protocadherin 19##NM_022144|TNMD|64102|tenomodulin##AF191770|TNMD|64102|tenomodulin##BC034030|TNMD|64102|tenomodulin##AF291656|TNMD|64102|tenomodulin##AF234259|TNMD|64102|tenomodulin##AY358706|TNMD|64102|tenomodulin##AB055421|TNMD|64102|tenomodulin##BT006977|TSPAN6|7105|tetraspanin 6##CR457115|TSPAN6|7105|tetraspanin 6##DQ890668|TSPAN6|7105|tetraspanin 6##DQ893849|TSPAN6|7105|tetraspanin 6##AF053453|TSPAN6|7105|tetraspanin 6##AK299176|TSPAN6|7105|tetraspanin 6##AF133426|TSPAN6|7105|tetraspanin 6##AK309581|TSPAN6|7105|tetraspanin 6##AY358825|TSPAN6|7105|tetraspanin 6##AB097016|TSPAN6|7105|tetraspanin 6##AF043906|TSPAN6|7105|tetraspanin 6##U84895|TSPAN6|7105|tetraspanin 6##BC012389|TSPAN6|7105|tetraspanin 6##NM_003270|TSPAN6|7105|tetraspanin 6##AK075072|TSPAN6|7105|tetraspanin 6##AB209876|TSPAN6|7105|tetraspanin 6##AK315773|TSPAN6|7105|tetraspanin 6##AK300852|TSPAN6|7105|tetraspanin 6	0.984986	CTCF.p2:7:0.818
chr10	98271125	98271230	reg1014614.p1	8.714	+	AF367761 NM_001040102 NM_001040103 NM_033207	-152103	-	NM_001017520 NM_004088 AB046378 AK313615 M26144 BC012920 AK223317 DQ891465 DQ894645	-207009	+	AM180327 AM180328 AM180329 AM180330 AM180331 AM180332 AM180333 AM180334 AM180335 AM180336 AM180337 AM180338 AM180339 AM180340 AM180341 AM180342 AM180343 AM180344 AM180345 AM180346 BC018906 BC110298 AK027779 AF068180 AF068181 AK225546 NM_001114094 NM_013314	-239934	-	AB384048 BC113577 BC112341 BC112366 AB023149 BC013871 BC030548 TSC_hg19_v1_chr10_-_98273674 AK026106 NM_012465	2386	-	AK075451 TSC_hg19_v1_chr10_-_98290333	19160	-	AK074824 TSC_hg19_v1_chr10_-_98321895	50683	-	AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal##NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal##AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal##AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal##M26144|DNTT|1791|deoxynucleotidyltransferase, terminal##BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal##AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal##AM180327|BLNK|29760|B-cell linker##AM180328|BLNK|29760|B-cell linker##AM180329|BLNK|29760|B-cell linker##AM180330|BLNK|29760|B-cell linker##AM180331|BLNK|29760|B-cell linker##AM180332|BLNK|29760|B-cell linker##AM180333|BLNK|29760|B-cell linker##AM180334|BLNK|29760|B-cell linker##AM180335|BLNK|29760|B-cell linker##AM180336|BLNK|29760|B-cell linker##AM180337|BLNK|29760|B-cell linker##AM180338|BLNK|29760|B-cell linker##AM180339|BLNK|29760|B-cell linker##AM180340|BLNK|29760|B-cell linker##AM180341|BLNK|29760|B-cell linker##AM180342|BLNK|29760|B-cell linker##AM180343|BLNK|29760|B-cell linker##AM180344|BLNK|29760|B-cell linker##AM180345|BLNK|29760|B-cell linker##AM180346|BLNK|29760|B-cell linker##BC018906|BLNK|29760|B-cell linker##BC110298|BLNK|29760|B-cell linker##AK027779|BLNK|29760|B-cell linker##AF068180|BLNK|29760|B-cell linker##AF068181|BLNK|29760|B-cell linker##AK225546|BLNK|29760|B-cell linker##NM_001114094|BLNK|29760|B-cell linker##NM_013314|BLNK|29760|B-cell linker##BC113577|TLL2|7093|tolloid-like 2##BC112341|TLL2|7093|tolloid-like 2##BC112366|TLL2|7093|tolloid-like 2##AB023149|TLL2|7093|tolloid-like 2##BC013871|TLL2|7093|tolloid-like 2##BC030548|TLL2|7093|tolloid-like 2##AK026106|TLL2|7093|tolloid-like 2##NM_012465|TLL2|7093|tolloid-like 2##AK075451|TM9SF3|56889|transmembrane 9 superfamily member 3##AK074824|TM9SF3|56889|transmembrane 9 superfamily member 3	0.996461	CTCF.p2:-20:0.996
chr12	38710238	38710368	reg1014970.p1	8.714	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-4534830	+	TSC_hg19_v1_chr12_+_34175402 BC022336	-4534917	+	AJ312278 NM_032834	-4535088	+	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	322	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	589080	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	1126696	-	BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC022336|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AJ312278|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_032834|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A	0.981376	CTCF.p2:8:0.981
chr9	125261201	125261297	reg1014651.p1	8.714	+	NM_001004451 AB529234 BC136933 BC136938	-21030	-	AK304403 TSC_hg19_v1_chr9_+_125137614	-123642	+	TSC_hg19_v1_chr9_+_125133330 AK290022 M59979 AB590429 DQ180740 DQ180741 DQ180742 S36219 S36271 S78220	-127907	+	AB528201 NM_054107	11831	+	AB529305 NM_001004452 BC131606	20170	+	NM_012363	28322	-	NM_001004451|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1##BC136933|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1##BC136938|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1##AK304403|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##AK290022|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##M59979|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##DQ180740|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##DQ180741|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##DQ180742|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##S36219|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##S36271|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##S78220|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##NM_054107|OR1J2|26740|olfactory receptor, family 1, subfamily J, member 2##NM_001004452|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4##BC131606|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4##NM_012363|OR1N1|138883|olfactory receptor, family 1, subfamily N, member 1	0.440737	CTCF.p2:7:0.441
chrX	14715688	14715840	reg1014746.p2	8.714	+	AK312591 NM_001118885 NM_001118886 NM_001171942 NM_002063 AK297304	-168314	+	BC003607 AK000521 BC014324 BC020785 NM_001042479 NM_001042480 NM_017856	-667768	-	TSC_hg19_v1_chrX_-_13956758 AB209525 U45955 NM_001001994	-758936	-	TSC_hg19_v1_chrX_-_14891182 BC136558 BC136560 BC043596 BC055411 NM_001018113 NM_152633 AK091383 AX746948	175411	-	NM_152581 TSC_hg19_v1_chrX_+_14891582 BC030641 AL832230 AK315781	175792	+	AK093075 AX747905 NM_001177475	187648	+	AK312591|GLRA2|2742|glycine receptor, alpha 2##NM_001118885|GLRA2|2742|glycine receptor, alpha 2##NM_001118886|GLRA2|2742|glycine receptor, alpha 2##NM_001171942|GLRA2|2742|glycine receptor, alpha 2##NM_002063|GLRA2|2742|glycine receptor, alpha 2##AK297304|GLRA2|2742|glycine receptor, alpha 2##BC003607|GEMIN8|54960|gem (nuclear organelle) associated protein 8##AK000521|GEMIN8|54960|gem (nuclear organelle) associated protein 8##BC014324|GEMIN8|54960|gem (nuclear organelle) associated protein 8##BC020785|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_001042479|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_001042480|GEMIN8|54960|gem (nuclear organelle) associated protein 8##NM_017856|GEMIN8|54960|gem (nuclear organelle) associated protein 8##AB209525|GPM6B|2824|glycoprotein M6B##U45955|GPM6B|2824|glycoprotein M6B##NM_001001994|GPM6B|2824|glycoprotein M6B##BC136558|FANCB|2187|Fanconi anemia, complementation group B##BC136560|FANCB|2187|Fanconi anemia, complementation group B##BC043596|FANCB|2187|Fanconi anemia, complementation group B##BC055411|FANCB|2187|Fanconi anemia, complementation group B##NM_001018113|FANCB|2187|Fanconi anemia, complementation group B##NM_152633|FANCB|2187|Fanconi anemia, complementation group B##AK091383|FANCB|2187|Fanconi anemia, complementation group B##NM_152581|MOSPD2|158747|motile sperm domain containing 2##BC030641|MOSPD2|158747|motile sperm domain containing 2##AL832230|MOSPD2|158747|motile sperm domain containing 2##AK315781|MOSPD2|158747|motile sperm domain containing 2##AK093075|MOSPD2|158747|motile sperm domain containing 2##NM_001177475|MOSPD2|158747|motile sperm domain containing 2	0.228155	
chr15	77159176	77159303	reg1014224.p1	8.713	+	BX647285 NM_001145923	-4955	-	TSC_hg19_v1_chr15_+_76629141 AB593133 AK001022 BC012136 NM_145805 BC011967 EU446846	-530077	+	TSC_hg19_v1_chr15_-_76603808 AK292979 NM_000126 NM_001127716	-555425	-	AF242528 NM_020843	16964	-	TSC_hg19_v1_chr15_-_77197682 BC070197 BC107415 AK056515	38425	-	AB040887 TSC_hg19_v1_chr15_-_77197781 AK056095	38532	-	BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER##NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AB593133|ISL2|64843|ISL LIM homeobox 2##AK001022|ISL2|64843|ISL LIM homeobox 2##BC012136|ISL2|64843|ISL LIM homeobox 2##NM_145805|ISL2|64843|ISL LIM homeobox 2##BC011967|ISL2|64843|ISL LIM homeobox 2##EU446846|ISL2|64843|ISL LIM homeobox 2##AK292979|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##NM_000126|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##NM_001127716|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##AF242528|SCAPER|49855|S-phase cyclin A-associated protein in the ER##NM_020843|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC070197|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC107415|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056515|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AB040887|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056095|SCAPER|49855|S-phase cyclin A-associated protein in the ER	0.205483	CTCF.p2:19:0.205
chr20	4594581	4594728	reg1017231.p1	8.713	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	-365064	-	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	-465131	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	-465219	+	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	72322	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	107880	+	AY154472 NM_170774	201114	-	L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	0.68799	CTCF.p2:-6:0.688
chr2	56188558	56188696	reg1016627.p1	8.713	+	AK293058 NM_001039348 NM_001039349	-37342	-	TSC_hg19_v1_chr2_-_56150918 AK301531 BC014410 BC098561 AK301402 AK312639 AK092854 AK290599 AX747769	-37712	-	TSC_hg19_v1_chr2_-_55920980 BC053660 BC009057 AK027437 AY027528 AK307589 AJ458465 NM_033109	-267649	-	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	222578	+	AB384323 TSC_hg19_v1_chr2_+_56411776	223139	+	AK311113 TSC_hg19_v1_chr2_-_56412914	224282	-	AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301531|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC014410|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC098561|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301402|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK312639|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK092854|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK290599|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC053660|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##BC009057|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AY027528|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AK307589|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AJ458465|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##NM_033109|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK311113|LOC100129434|100129434|uncharacterized LOC100129434	0.994553	CTCF.p2:9:0.995
chr7	99943006	99943127	reg1011952.p4	8.713	+	TSC_hg19_v1_chr7_+_99933808 AL834317	-9244	+	TSC_hg19_v1_chr7_+_99933747 AK056412 AK310352	-9311	+	AB103084 TSC_hg19_v1_chr7_-_99933502 BC038996 D38435 D38499 BC110395 BC044214 BC067809	-9525	-	AJ400845 NM_178238 AF161081	12565	+	AF161080 NM_013439 NM_178272 NM_178273 BC017812 TSC_hg19_v1_chr7_+_99971109 AJ400841	28030	+	TSC_hg19_v1_chr7_+_99971132 AJ400842 AJ400843 AK298731 AB590724 CU676074	28139	+	AL834317|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AK056412|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AK310352|PILRB|29990|paired immunoglobin-like type 2 receptor beta##BC038996|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38435|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38499|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC110395|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC044214|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC067809|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##AJ400845|PILRB|29990|paired immunoglobin-like type 2 receptor beta##NM_178238|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AF161081|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AF161080|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_013439|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178272|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178273|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##BC017812|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400841|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400842|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400843|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AK298731|PILRA|29992|paired immunoglobin-like type 2 receptor alpha	0.957154	CTCF.p2:19:0.957
chr4	71517970	71518137	reg1013982.p2	8.712	+	AF125373 NM_031889	-23593	+	NM_016519 AF209780 AF263464 AJ537437 AF219994 AK314918 BC106931 BC106932	-60047	+	AB593161 AY358528 NM_212557 BC121812 BC121817	-133750	+	AB527699 DQ884395 TSC_hg19_v1_chr4_-_71532226 AK312014 BC038982	14181	-	TSC_hg19_v1_chr4_-_71532347 NM_144646	14293	-	NM_020368 AF271212 TSC_hg19_v1_chr4_+_71554248 AK026909 BC004546 AL136590 AB463337 AM392862 AM393072 AM393229 DQ892999 EU176750 CU678762 CR533544	36241	+	AF125373|ENAM|10117|enamelin##NM_031889|ENAM|10117|enamelin##NM_016519|AMBN|258|ameloblastin (enamel matrix protein)##AF209780|AMBN|258|ameloblastin (enamel matrix protein)##AF263464|AMBN|258|ameloblastin (enamel matrix protein)##AJ537437|AMBN|258|ameloblastin (enamel matrix protein)##AF219994|AMBN|258|ameloblastin (enamel matrix protein)##AK314918|AMBN|258|ameloblastin (enamel matrix protein)##BC106931|AMBN|258|ameloblastin (enamel matrix protein)##BC106932|AMBN|258|ameloblastin (enamel matrix protein)##AB593161|AMTN|401138|amelotin##AY358528|AMTN|401138|amelotin##NM_212557|AMTN|401138|amelotin##BC121812|AMTN|401138|amelotin##BC121817|AMTN|401138|amelotin##DQ884395|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##AK312014|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##BC038982|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##NM_144646|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##NM_020368|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AF271212|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AK026909|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##BC004546|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AL136590|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AM392862|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AM393072|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AM393229|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##DQ892999|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##EU176750|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##CR533544|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	0.980246	CTCF.p2:-27:0.980
chr10	122708529	122708630	reg1012272.p1	8.711	+	TSC_hg19_v1_chr10_+_122610873 BC040469 AB037772 AK299524 AF320223 AK301761 BC071564 AK315145 AB385454	-97684	+	NM_018117 TSC_hg19_v1_chr10_+_122610771	-97851	+	NM_001030059 TSC_hg19_v1_chr10_+_122216486 BC101267 BC101268 BC101269 BC122535 BC132787 AK296273 HQ258170 AK310178	-491940	+	AB084153 EF057068 EU826598 EU826599 EU826600 EU826601 AB587574 M55614 Z71929 X56191 NM_001144913 NM_001144914	644826	-	AK308621 NM_001144916	645192	-	AK294026 NM_001144915	647579	-	BC040469|WDR11|55717|WD repeat domain 11##AB037772|WDR11|55717|WD repeat domain 11##AK299524|WDR11|55717|WD repeat domain 11##AF320223|WDR11|55717|WD repeat domain 11##AK301761|WDR11|55717|WD repeat domain 11##BC071564|WDR11|55717|WD repeat domain 11##AK315145|WDR11|55717|WD repeat domain 11##NM_018117|WDR11|55717|WD repeat domain 11##NM_001030059|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101267|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101268|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101269|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC122535|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC132787|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##HQ258170|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AK310178|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AB084153|FGFR2|2263|fibroblast growth factor receptor 2##EF057068|FGFR2|2263|fibroblast growth factor receptor 2##EU826598|FGFR2|2263|fibroblast growth factor receptor 2##EU826599|FGFR2|2263|fibroblast growth factor receptor 2##EU826600|FGFR2|2263|fibroblast growth factor receptor 2##EU826601|FGFR2|2263|fibroblast growth factor receptor 2##M55614|FGFR2|2263|fibroblast growth factor receptor 2##Z71929|FGFR2|2263|fibroblast growth factor receptor 2##X56191|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144913|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144914|FGFR2|2263|fibroblast growth factor receptor 2##AK308621|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144916|FGFR2|2263|fibroblast growth factor receptor 2##AK294026|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2	0.269687	CTCF.p2:-5:0.270
chr17	78955216	78955313	reg1014126.p2	8.711	+	TSC_hg19_v1_chr17_+_78935064 BC073898	-20132	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-436446	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-436615	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	10377	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	10430	+	AK124762 TSC_hg19_v1_chr17_-_79008489 AK056555	53183	-	BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6##AK124762|FLJ90757|440465|uncharacterized LOC440465##AK056555|FLJ90757|440465|uncharacterized LOC440465	0.235537	CTCF.p2:17:0.236
chr5	43730084	43730234	reg1019231.p1	8.711	+	Z50101 AB385177 AM392664 AM393615 TSC_hg19_v1_chr5_+_43609371	-120843	+	TSC_hg19_v1_chr5_+_43603313 BC110543 BC110544	-126805	+	TSC_hg19_v1_chr5_+_43603303 AK299622 U40490	-126860	+	AF508782 AB002097 AF411527 BC069561 CR541665 CR541688 GQ351295 HQ258011 NM_004465 U67918 BC105023 BC105021 BC143772	658606	-	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	1078868	+	AF064876 TSC_hg19_v1_chr5_-_45695947	1965732	-	Z50101|NNT|23530|nicotinamide nucleotide transhydrogenase##AM392664|NNT|23530|nicotinamide nucleotide transhydrogenase##AM393615|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110543|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110544|NNT|23530|nicotinamide nucleotide transhydrogenase##AK299622|NNT|23530|nicotinamide nucleotide transhydrogenase##U40490|NNT|23530|nicotinamide nucleotide transhydrogenase##AF508782|FGF10|2255|fibroblast growth factor 10##AB002097|FGF10|2255|fibroblast growth factor 10##AF411527|FGF10|2255|fibroblast growth factor 10##BC069561|FGF10|2255|fibroblast growth factor 10##CR541665|FGF10|2255|fibroblast growth factor 10##CR541688|FGF10|2255|fibroblast growth factor 10##GQ351295|FGF10|2255|fibroblast growth factor 10##HQ258011|FGF10|2255|fibroblast growth factor 10##NM_004465|FGF10|2255|fibroblast growth factor 10##U67918|FGF10|2255|fibroblast growth factor 10##BC105023|FGF10|2255|fibroblast growth factor 10##BC105021|FGF10|2255|fibroblast growth factor 10##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1	0.195746	
chr18	55719118	55719288	reg1015504.p1	8.710	+	AF385931 NM_001144964	-4746	+	TSC_hg19_v1_chr18_+_55712924 AY243322	-6296	+	DQ890913 DQ893350 AY312514 TSC_hg19_v1_chr18_+_55711911	-7297	+	TSC_hg19_v1_chr18_+_55816551 AY112983 AY112984 DQ181796 NM_001144965 NM_001144968 NM_001144969 NM_001144971 AY112985	97354	+	TSC_hg19_v1_chr18_+_55862636 NM_001144970 AK294963 AY243318 AB007899	143527	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	169559	+	AF385931|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144964|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243322|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112983|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112984|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ181796|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144965|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144968|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144969|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144971|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112985|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.015571	
chr22	41922836	41922967	reg1013615.p2	8.710	+	TSC_hg19_v1_chr22_+_41865120 AK293562 AK297213 AK301321 AK314845 AK302691 AK296260 BC026196 BC014092 NM_001098 U80040 CR456365 AB385022 CR536568 CU012932 CU013220 DQ893674 DQ895836	-57770	+	AB489147 CU012956 CU013244 EU446678 TSC_hg19_v1_chr22_-_41864681 BC075808 CR456398 BC007321 NM_032758	-58217	-	TSC_hg19_v1_chr22_-_41842881 NM_016272	-79962	-	TSC_hg19_v1_chr22_-_41940381 AB051452 BC088367 BC017248	17452	-	TSC_hg19_v1_chr22_-_41940495 AY092087 AK026524 AK129663 NM_138338 NM_001018050 NM_001018052 CR456459	17599	-	TSC_hg19_v1_chr22_+_41957014 NM_014460 AK313407 BC067113 AL834417	34168	+	AK293562|ACO2|50|aconitase 2, mitochondrial##AK297213|ACO2|50|aconitase 2, mitochondrial##AK301321|ACO2|50|aconitase 2, mitochondrial##AK314845|ACO2|50|aconitase 2, mitochondrial##AK302691|ACO2|50|aconitase 2, mitochondrial##AK296260|ACO2|50|aconitase 2, mitochondrial##BC026196|ACO2|50|aconitase 2, mitochondrial##BC014092|ACO2|50|aconitase 2, mitochondrial##NM_001098|ACO2|50|aconitase 2, mitochondrial##U80040|ACO2|50|aconitase 2, mitochondrial##CR456365|ACO2|50|aconitase 2, mitochondrial##CR536568|ACO2|50|aconitase 2, mitochondrial##CU012932|ACO2|50|aconitase 2, mitochondrial##CU013220|ACO2|50|aconitase 2, mitochondrial##DQ893674|ACO2|50|aconitase 2, mitochondrial##DQ895836|ACO2|50|aconitase 2, mitochondrial##CU012956|PHF5A|84844|PHD finger protein 5A##CU013244|PHF5A|84844|PHD finger protein 5A##EU446678|PHF5A|84844|PHD finger protein 5A##BC075808|PHF5A|84844|PHD finger protein 5A##CR456398|PHF5A|84844|PHD finger protein 5A##BC007321|PHF5A|84844|PHD finger protein 5A##NM_032758|PHF5A|84844|PHD finger protein 5A##NM_016272|TOB2|10766|transducer of ERBB2, 2##AB051452|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC088367|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC017248|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AY092087|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK026524|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK129663|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_138338|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018050|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018052|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##CR456459|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_014460|CSDC2|27254|cold shock domain containing C2, RNA binding##AK313407|CSDC2|27254|cold shock domain containing C2, RNA binding##BC067113|CSDC2|27254|cold shock domain containing C2, RNA binding##AL834417|CSDC2|27254|cold shock domain containing C2, RNA binding	0.997187	CTCF.p2:2:0.997
chr6	118605089	118605217	reg1015898.p1	8.710	+	BC028615 NM_001029858 BC114925	-376463	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-608487	+	BC110325 TSC_hg19_v1_chr6_+_117996661 BC063794	-608492	+	NM_002667 M63603 AK311799 BC005269	264312	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	367883	-	BC110835 BC064835 NM_001178035	426080	-	BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC110325|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC063794|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like	0.0	
chr1	186775733	186775863	reg1017306.p1	8.709	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-126308	-	M33478 NM_002597	-345571	-	AF076464 NM_022576	-357943	-	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	22290	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	3670937	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	5351805	+	AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AF076464|PDC|5132|phosducin##NM_022576|PDC|5132|phosducin##NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18	0.248122	CTCF.p2:12:0.248
chr12	12941851	12941991	reg1016316.p1	8.709	+	BC126433 BC126435 NM_030817 TSC_hg19_v1_chr12_+_12938594 AK057867 AK225176 AK314392 AL136783	-3344	+	TSC_hg19_v1_chr12_+_12878853 NM_001130415 AK127712 BC042478 AM393383	-63065	+	TSC_hg19_v1_chr12_+_12870308 AK312461 NM_004064 BC001971 AK298335	-71795	+	AK310501 TSC_hg19_v1_chr12_+_12966285 AK302536 AL136666 NM_016355 NM_201224 AL833469 AK054574 BC068009 AB462951 AJ276704 AM393320 AM393714 AK225144 AF190165 BC009379 AK222940 AF078843 EF036507	24369	+	NM_003979	102034	+	AK001761 TSC_hg19_v1_chr12_+_13044469	102490	+	BC126433|APOLD1|81575|apolipoprotein L domain containing 1##BC126435|APOLD1|81575|apolipoprotein L domain containing 1##NM_030817|APOLD1|81575|apolipoprotein L domain containing 1##AK225176|APOLD1|81575|apolipoprotein L domain containing 1##AK314392|APOLD1|81575|apolipoprotein L domain containing 1##AL136783|APOLD1|81575|apolipoprotein L domain containing 1##NM_001130415|APOLD1|81575|apolipoprotein L domain containing 1##BC042478|APOLD1|81575|apolipoprotein L domain containing 1##AM393383|APOLD1|81575|apolipoprotein L domain containing 1##AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK310501|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK302536|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AL136666|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_016355|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_201224|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AL833469|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK054574|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC068009|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AJ276704|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AM393320|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AM393714|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK225144|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AF190165|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC009379|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK222940|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AF078843|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##EF036507|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_003979|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AK001761|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A	0.53108	CTCF.p2:-9:0.531
chr22	38694415	38694550	reg1015550.p1	8.709	+	TSC_hg19_v1_chr22_-_38669012 BC015489 AB097053 AK309071 AK292652 NM_001195072 NM_012264	-25474	-	TSC_hg19_v1_chr22_-_38668943 CR749859	-25537	-	NM_001195071	-25813	-	BC006490 AB091043 TSC_hg19_v1_chr22_-_38713340 AK223498	18809	-	TSC_hg19_v1_chr22_-_38713439 NM_152221	18932	-	AB024597 NM_001894	19606	-	BC015489|TMEM184B|25829|transmembrane protein 184B##AB097053|TMEM184B|25829|transmembrane protein 184B##AK309071|TMEM184B|25829|transmembrane protein 184B##AK292652|TMEM184B|25829|transmembrane protein 184B##NM_001195072|TMEM184B|25829|transmembrane protein 184B##NM_012264|TMEM184B|25829|transmembrane protein 184B##CR749859|TMEM184B|25829|transmembrane protein 184B##NM_001195071|TMEM184B|25829|transmembrane protein 184B##BC006490|CSNK1E|1454|casein kinase 1, epsilon##AB091043|CSNK1E|1454|casein kinase 1, epsilon##AK223498|CSNK1E|1454|casein kinase 1, epsilon##NM_152221|CSNK1E|1454|casein kinase 1, epsilon##AB024597|CSNK1E|1454|casein kinase 1, epsilon##NM_001894|CSNK1E|1454|casein kinase 1, epsilon	0.829369	CTCF.p2:4:0.829
chr3	126701412	126701559	reg1015415.p2	8.709	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-278408	+	TSC_hg19_v1_chr3_-_126373968 NM_001173513 NM_052883	-327509	-	TSC_hg19_v1_chr3_-_126373947 AK299502 BC030028 BC050032	-327571	-	AB385178 NM_032242 X87832	5955	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	210509	+	AB037108 NM_016372	597794	-	AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_001173513|TXNRD3|114112|thioredoxin reductase 3##NM_052883|TXNRD3|114112|thioredoxin reductase 3##AK299502|TXNRD3|114112|thioredoxin reductase 3##BC030028|TXNRD3|114112|thioredoxin reductase 3##BC050032|TXNRD3|114112|thioredoxin reductase 3##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	0.993641	CTCF.p2:8:0.994
chr7	50252357	50252488	reg1014131.p1	8.709	+	NM_001161834	-116741	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	-119598	-	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-439152	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	91931	+	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	95897	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	265632	-	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1	0.286791	CTCF.p2:-15:0.268
chr8	102644843	102645004	reg1016200.p1	8.709	+	TSC_hg19_v1_chr8_+_102504840 AK023844 AK292853 BC069618 BC069633 BC069638 BC129822 BC129823	-140013	+	TSC_hg19_v1_chr8_+_102504667 NM_024915 AK296817 AK310221	-140258	+	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	-426969	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	158260	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	158277	-	NM_032041	158515	-	AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##NM_032041|NCALD|83988|neurocalcin delta	0.215491	
chr12	3409176	3409281	reg1010721.p1	8.708	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-222666	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-340167	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-340634	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	191213	+	AK125333 TSC_hg19_v1_chr12_-_3601984	192757	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	453040	-	NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B	1.048084	CTCF.p2:5:0.975
chr1	57175061	57175206	reg1017753.p1	8.708	+	TSC_hg19_v1_chr1_+_57110986 AK314011 NM_006252 U06454 BC069680 BC069740 BC069823 EF056019	-64231	+	TSC_hg19_v1_chr1_-_57045237 NM_003713	-129888	-	AK312439 TSC_hg19_v1_chr1_-_57045216	-129916	-	AK125198 NM_001004303 TSC_hg19_v1_chr1_-_57285379	110240	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	145375	+	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	256583	-	AK314011|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_006252|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##U06454|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069680|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069740|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069823|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##EF056019|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_003713|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK125198|C1orf168|199920|chromosome 1 open reading frame 168##NM_001004303|C1orf168|199920|chromosome 1 open reading frame 168##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide	0.99663	CTCF.p2:17:0.997
chr9	73255254	73255364	reg1016502.p1	8.708	+	D31716 S72504 NM_001206	-225754	-	AB451404 CU686806 AB464604 EU446889 TSC_hg19_v1_chr9_-_73028875 BC074879 BC074880 AK313631 BC069431	-226634	-	TSC_hg19_v1_chr9_+_72873993 AB385355 AJ310550 DQ893364 DQ896768	-381320	+	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	228651	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	481227	-	AL136545 TSC_hg19_v1_chr9_-_74061901	806574	-	D31716|KLF9|687|Kruppel-like factor 9##S72504|KLF9|687|Kruppel-like factor 9##NM_001206|KLF9|687|Kruppel-like factor 9##AB451404|KLF9|687|Kruppel-like factor 9##EU446889|KLF9|687|Kruppel-like factor 9##BC074879|KLF9|687|Kruppel-like factor 9##BC074880|KLF9|687|Kruppel-like factor 9##AK313631|KLF9|687|Kruppel-like factor 9##BC069431|KLF9|687|Kruppel-like factor 9##AJ310550|SMC5|23137|structural maintenance of chromosomes 5##DQ893364|SMC5|23137|structural maintenance of chromosomes 5##DQ896768|SMC5|23137|structural maintenance of chromosomes 5##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	0.998859	CTCF.p2:-12:0.999
chr11	23561728	23561841	reg1015328.p2	8.707	+	NM_001195637	-679813	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-710439	-	TSC_hg19_v1_chr11_+_22696382 CU680566 AB590780 CR450285	-865386	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	956865	+	NM_031418 AK302659	2791946	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	3031956	-	NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##CR450285|GAS2|2620|growth arrest-specific 2##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated	0.98131	CTCF.p2:0:0.981
chr14	54814836	54814956	reg1013105.p1	8.707	+	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	-391363	-	NM_130851	-393627	-	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-1194846	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	48825	+	TSC_hg19_v1_chr14_-_54908095 BX248284 AY358635 AK074781 AK307074 AK311897 AF070654 AF104398 NM_005776 BC103741	93220	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	140789	-	BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##NM_130851|BMP4|652|bone morphogenetic protein 4##NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BX248284|CNIH|10175|cornichon homolog (Drosophila)##AY358635|CNIH|10175|cornichon homolog (Drosophila)##AK074781|CNIH|10175|cornichon homolog (Drosophila)##AK307074|CNIH|10175|cornichon homolog (Drosophila)##AK311897|CNIH|10175|cornichon homolog (Drosophila)##AF070654|CNIH|10175|cornichon homolog (Drosophila)##AF104398|CNIH|10175|cornichon homolog (Drosophila)##NM_005776|CNIH|10175|cornichon homolog (Drosophila)##BC103741|CNIH|10175|cornichon homolog (Drosophila)##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta	0.417144	CTCF.p2:19:0.417
chr2	122655283	122655395	reg1015650.p1	8.707	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-142102	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-160874	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-247694	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	2127525	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	4758368	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	4758453	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.99267	CTCF.p2:-5:0.993
chr4	142267442	142267580	reg1015223.p1	8.707	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-125425	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-125456	+	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	-212980	-	AK290619 NM_000585 NM_172175 BC018149 U14407	290255	+	NM_001101669 NM_003866	1500092	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	1838553	+	AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38	0.0	
chr2	218515604	218515715	reg1012868.p1	8.706	+	BC029516 NM_003284	-790878	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-955399	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-956093	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	293122	-	AK001785 TSC_hg19_v1_chr2_-_218843551	327887	-	TSC_hg19_v1_chr2_-_218867719 AK309785	352064	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.988254	CTCF.p2:3:0.988
chr1	148000271	148000400	reg1015004.p2	8.705	+	BC130376 BC130378 AB084917 NM_001143883 NM_178230	-44938	-	BC099898 BC071624 AK097058 AK310056 TSC_hg19_v1_chr1_-_147931936 AK310186 AK309393	-68407	-	AL832622 TSC_hg19_v1_chr1_-_147624600	-375735	-	AL117237 NM_015383 BC094705	25519	-	TSC_hg19_v1_chr1_-_148176396 BC110832	176061	-	NM_001164261 NM_001164262	202200	-	BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC071624|FLJ39739|388685|uncharacterized FLJ39739##AK097058|FLJ39739|388685|uncharacterized FLJ39739##AK310056|FLJ39739|388685|uncharacterized FLJ39739##AK310186|FLJ39739|388685|uncharacterized FLJ39739##AK309393|FLJ39739|388685|uncharacterized FLJ39739##AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##AL117237|NBPF14|25832|neuroblastoma breakpoint family, member 14##NM_015383|NBPF14|25832|neuroblastoma breakpoint family, member 14##BC094705|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F	0.042721	
chr15	101212310	101212430	reg1013543.p1	8.705	+	NM_024708 NM_198243 TSC_hg19_v1_chr15_+_101142810 AK289860 BC063581 AF451994 AK026204 AK222958 AK222974 BC025252	-69575	+	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	-69961	-	BC034500 BC034970 NM_178842	-127473	-	TSC_hg19_v1_chr15_+_101390032 AK056534	177663	+	TSC_hg19_v1_chr15_+_101420006 NM_000693	207636	+	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	207701	+	NM_024708|ASB7|140460|ankyrin repeat and SOCS box containing 7##NM_198243|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK289860|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC063581|ASB7|140460|ankyrin repeat and SOCS box containing 7##AF451994|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK026204|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222958|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222974|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC025252|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK056534|LOC145757|145757|uncharacterized LOC145757##NM_000693|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3	0.958183	CTCF.p2:0:0.922
chr13	82214280	82214406	reg1014681.p1	8.704	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-1299279	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-1301301	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-2158788	+	TSC_hg19_v1_chr13_-_84456424 BC051738	2242082	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	2242157	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	4159096	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.994464	CTCF.p2:-24:0.994
chr14	103541987	103542123	reg1017184.p1	8.703	+	BC047871 BC048261 TSC_hg19_v1_chr14_-_103523736 AB032950 BC155541 NM_006035 BC078666 AF128625	-18318	-	AB384568 TSC_hg19_v1_chr14_-_103523568	-18514	-	TSC_hg19_v1_chr14_-_103430941 BX248752	-111097	-	BC113655 BC117375 NM_001077594 HQ258590	24463	+	TSC_hg19_v1_chr14_+_103589771 BC017818	47690	+	M92357 NM_006291 BC128449 BC128450 TSC_hg19_v1_chr14_+_103592873	50713	+	BC047871|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC048261|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AB032950|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC155541|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##NM_006035|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AF128625|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BX248752|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC113655|EXOC3L4|91828|exocyst complex component 3-like 4##BC117375|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001077594|EXOC3L4|91828|exocyst complex component 3-like 4##HQ258590|EXOC3L4|91828|exocyst complex component 3-like 4##BC017818|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	0.632248	CTCF.p2:6:0.632
chr17	46157705	46157811	reg1012969.p1	8.703	+	BX647976 TSC_hg19_v1_chr17_+_46126143	-31617	+	TSC_hg19_v1_chr17_+_46125725 X77366	-32006	+	AL833530 TSC_hg19_v1_chr17_+_46125724	-32034	+	NM_006807 TSC_hg19_v1_chr17_-_46178605	20825	-	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	21063	-	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	27227	+	BX647976|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##X77366|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##NM_006807|CBX1|10951|chromobox homolog 1##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11	0.990326	CTCF.p2:-1:0.990
chr3	185960460	185960590	reg1002940.p3	8.703	+	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	-133669	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	-134179	-	TSC_hg19_v1_chr3_-_185655843 AK315632 NM_001243879 NM_004593	-304647	-	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	119409	-	CU686840 AF161703 BC069478 AK314172 NM_017541	301615	-	TSC_hg19_v1_chr3_-_186285118 AK001422 BC025748	324583	-	BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AF161703|CRYGS|1427|crystallin, gamma S##BC069478|CRYGS|1427|crystallin, gamma S##AK314172|CRYGS|1427|crystallin, gamma S##NM_017541|CRYGS|1427|crystallin, gamma S##AK001422|TBCCD1|55171|TBCC domain containing 1##BC025748|TBCCD1|55171|TBCC domain containing 1	0.121176	
chr4	156450499	156450622	reg1014396.p1	8.703	+	TSC_hg19_v1_chr4_-_156298108 AK024812 AY690636 NM_001039580	-152449	-	TSC_hg19_v1_chr4_-_156297990 AK301075 BC146864 BC128540 BC128541 BC056683	-152552	-	TSC_hg19_v1_chr4_-_156297959 BC022852	-152605	-	NM_000856 NM_001130682 NM_001130686 NM_001130687 X66534 Y15723 AK312952 BC095395 TSC_hg19_v1_chr4_+_156587999 AK309950 AK096588 NM_001130683 NM_001130685 BX649180 AK226125 BX647200 BC012627	137615	+	TSC_hg19_v1_chr4_+_156588813 NM_001130684 BC028384	138257	+	NM_000857 TSC_hg19_v1_chr4_+_156680190 AK315944 AK300296 AK315199 AK296680 AK307838 BC026332 BC060835 BC047620 X66533 AF020340	229644	+	AK024812|MAP9|79884|microtubule-associated protein 9##AY690636|MAP9|79884|microtubule-associated protein 9##NM_001039580|MAP9|79884|microtubule-associated protein 9##AK301075|MAP9|79884|microtubule-associated protein 9##BC146864|MAP9|79884|microtubule-associated protein 9##BC128540|MAP9|79884|microtubule-associated protein 9##BC128541|MAP9|79884|microtubule-associated protein 9##BC056683|MAP9|79884|microtubule-associated protein 9##BC022852|MAP9|79884|microtubule-associated protein 9##NM_000856|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130682|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130686|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130687|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##X66534|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##Y15723|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK312952|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC095395|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK309950|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK096588|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130683|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130685|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BX649180|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK226125|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BX647200|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC012627|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130684|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC028384|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	0.421228	CTCF.p2:-21:0.421
chr1	251262	251360	reg1015005.p1	8.702	+	NM_001005484	-182221	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-221906	-	None	None	None	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	116337	+	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	370731	-	TSC_hg19_v1_chr1_-_714015 BC006361	462706	-	NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene	0.973166	CTCF.p2:-1:0.973
chr16	70199114	70199218	reg1013839.p1	8.702	+	TSC_hg19_v1_chr16_+_70148247 AK292502 AK302987	-50919	+	AB082521 BC150251 NM_017990	-51638	+	TSC_hg19_v1_chr16_-_70099842 AK027135 AL833251	-99346	-	AF448856 BC039068 NM_173619 AL833339 AK074773 CU687316 BC062573	8938	+	TSC_hg19_v1_chr16_-_70285844 BC052252 NM_058219 BC039194	86667	-	BC011451 TSC_hg19_v1_chr16_-_70323364 AK299098	124201	-	AK292502|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##AK302987|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##AB082521|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##BC150251|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##NM_017990|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##AL833251|PDXDC2P|283970|pyridoxal-dependent decarboxylase domain containing 2, pseudogene##AF448856|CLEC18C|283971|C-type lectin domain family 18, member C##BC039068|CLEC18C|283971|C-type lectin domain family 18, member C##NM_173619|CLEC18C|283971|C-type lectin domain family 18, member C##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##BC062573|CLEC18C|283971|C-type lectin domain family 18, member C##BC052252|EXOSC6|118460|exosome component 6##NM_058219|EXOSC6|118460|exosome component 6##BC011451|AARS|16|alanyl-tRNA synthetase##AK299098|AARS|16|alanyl-tRNA synthetase	0.997986	CTCF.p2:-8:0.998
chr2	71016862	71016979	reg1015450.p2	8.702	+	TSC_hg19_v1_chr2_-_70995330 BC056881 BC051882 BC010237 BC041666 BC027876 AK297250 AK309773 AK291007 AB209227 AB593080 NM_001185055 NM_001617 NM_017482 NM_017488	-21629	-	BC065525 NM_001185054	-22074	-	NM_001099691 NM_003236	-235774	-	BC039536 AB463644 AY541030 NM_001004311	832	-	BC139723 BC144652 AK096429 AK301242 NM_173535	30784	-	CU692528 DQ891964 DQ895154 AK314927 BC022278 AJ242859 NM_015717	46008	-	BC056881|ADD2|119|adducin 2 (beta)##BC051882|ADD2|119|adducin 2 (beta)##BC010237|ADD2|119|adducin 2 (beta)##BC041666|ADD2|119|adducin 2 (beta)##BC027876|ADD2|119|adducin 2 (beta)##AK297250|ADD2|119|adducin 2 (beta)##AK309773|ADD2|119|adducin 2 (beta)##AK291007|ADD2|119|adducin 2 (beta)##AB209227|ADD2|119|adducin 2 (beta)##AB593080|ADD2|119|adducin 2 (beta)##NM_001185055|ADD2|119|adducin 2 (beta)##NM_001617|ADD2|119|adducin 2 (beta)##NM_017482|ADD2|119|adducin 2 (beta)##NM_017488|ADD2|119|adducin 2 (beta)##BC065525|ADD2|119|adducin 2 (beta)##NM_001185054|ADD2|119|adducin 2 (beta)##NM_001099691|TGFA|7039|transforming growth factor, alpha##NM_003236|TGFA|7039|transforming growth factor, alpha##BC039536|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##AY541030|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##NM_001004311|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##BC139723|CLEC4F|165530|C-type lectin domain family 4, member F##BC144652|CLEC4F|165530|C-type lectin domain family 4, member F##AK096429|CLEC4F|165530|C-type lectin domain family 4, member F##AK301242|CLEC4F|165530|C-type lectin domain family 4, member F##NM_173535|CLEC4F|165530|C-type lectin domain family 4, member F##DQ891964|CD207|50489|CD207 molecule, langerin##DQ895154|CD207|50489|CD207 molecule, langerin##AK314927|CD207|50489|CD207 molecule, langerin##BC022278|CD207|50489|CD207 molecule, langerin##AJ242859|CD207|50489|CD207 molecule, langerin##NM_015717|CD207|50489|CD207 molecule, langerin	0.882035	CTCF.p2:-10:0.882
chr1	54220509	54220602	reg1013686.p1	8.701	+	AK090634 AX746550 NM_147193	-20679	-	AK302085 TSC_hg19_v1_chr1_+_53925533 BC029566	-295025	+	AK057273 NM_033067 AJ291671	-295448	+	DQ141696 AK302910 BX648031 TSC_hg19_v1_chr1_-_54304004 AK298909 AK295000	83419	-	AK001269 AL354612 AL354613 TSC_hg19_v1_chr1_-_54304168 BC003082 NM_001168551 NM_018087	83610	-	AL713668 TSC_hg19_v1_chr1_-_54355462 AK000823 BC064590 AK315183	134880	-	AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1##AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##DQ141696|TMEM48|55706|transmembrane protein 48##AK302910|TMEM48|55706|transmembrane protein 48##BX648031|TMEM48|55706|transmembrane protein 48##AK298909|TMEM48|55706|transmembrane protein 48##AK295000|TMEM48|55706|transmembrane protein 48##AK001269|TMEM48|55706|transmembrane protein 48##AL354612|TMEM48|55706|transmembrane protein 48##AL354613|TMEM48|55706|transmembrane protein 48##BC003082|TMEM48|55706|transmembrane protein 48##NM_001168551|TMEM48|55706|transmembrane protein 48##NM_018087|TMEM48|55706|transmembrane protein 48##AL713668|YIPF1|54432|Yip1 domain family, member 1##AK000823|YIPF1|54432|Yip1 domain family, member 1##BC064590|YIPF1|54432|Yip1 domain family, member 1##AK315183|YIPF1|54432|Yip1 domain family, member 1	0.99723	CTCF.p2:7:0.997
chr20	42843820	42843951	reg1014559.p1	8.700	+	BC048277 BC067866 BC094781 BC032458 BC036500 AK055067 BC019858 TSC_hg19_v1_chr20_+_42839737	-4214	+	TSC_hg19_v1_chr20_-_42839428 AF151041 AF161517 AL133000 AK000476 NM_016470	-4401	-	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	-4529	-	TSC_hg19_v1_chr20_+_42875907 AK056251 AK225166 NM_024034	32021	+	TSC_hg19_v1_chr20_+_42875913 BC000199	32032	+	AF277566 TSC_hg19_v1_chr20_+_42875947 AK299259 AK293484 AK299700 AF123764	32062	+	BC048277|LOC100505783|100505783|uncharacterized LOC100505783##BC067866|LOC100505783|100505783|uncharacterized LOC100505783##BC094781|LOC100505783|100505783|uncharacterized LOC100505783##BC032458|LOC100505783|100505783|uncharacterized LOC100505783##BC036500|LOC100505783|100505783|uncharacterized LOC100505783##AK055067|LOC100505783|100505783|uncharacterized LOC100505783##BC019858|LOC100505783|100505783|uncharacterized LOC100505783##AF151041|C20orf111|51526|chromosome 20 open reading frame 111##AF161517|C20orf111|51526|chromosome 20 open reading frame 111##AL133000|C20orf111|51526|chromosome 20 open reading frame 111##AK000476|C20orf111|51526|chromosome 20 open reading frame 111##NM_016470|C20orf111|51526|chromosome 20 open reading frame 111##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111##AK056251|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AK225166|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##NM_024034|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##BC000199|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AF277566|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AK299259|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AK293484|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AK299700|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1##AF123764|GDAP1L1|78997|ganglioside-induced differentiation-associated protein 1-like 1	0.656478	CTCF.p2:-11:0.625
chr11	108742011	108742151	reg1017640.p1	8.699	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-206267	+	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	-277677	-	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	-372886	-	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	550762	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	550818	+	AK095101 TSC_hg19_v1_chr11_+_109963524	1221447	+	AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5##AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C	0.991038	CTCF.p2:14:0.991
chr11	37025205	37025306	reg1014789.p2	8.698	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-405453	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-409151	+	NM_000448 M29474	-435687	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	3289339	-	AB046800 NM_020929	3290408	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	6308263	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.853547	CTCF.p2:-3:0.854
chr1	174695779	174695916	reg1014061.p1	8.698	+	BC095532 NM_005684 CU688296 CU688298 BC067456 BC067457 BC067458 BC067459 BC067460 BC069460 HQ995526	-278617	+	AK095838 TSC_hg19_v1_chr1_+_174128676 AL157958	-567155	+	BC041888 NM_014857 TSC_hg19_v1_chr1_+_174128608	-567247	+	AB007940 NM_001243765	73187	+	NM_001243763 AL049701	147712	+	NM_001035230 BC012094	148822	+	BC095532|GPR52|9293|G protein-coupled receptor 52##NM_005684|GPR52|9293|G protein-coupled receptor 52##BC067456|GPR52|9293|G protein-coupled receptor 52##BC067457|GPR52|9293|G protein-coupled receptor 52##BC067458|GPR52|9293|G protein-coupled receptor 52##BC067459|GPR52|9293|G protein-coupled receptor 52##BC067460|GPR52|9293|G protein-coupled receptor 52##BC069460|GPR52|9293|G protein-coupled receptor 52##HQ995526|GPR52|9293|G protein-coupled receptor 52##AK095838|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL157958|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC041888|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_014857|RABGAP1L|9910|RAB GTPase activating protein 1-like##AB007940|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243765|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243763|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL049701|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001035230|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC012094|RABGAP1L|9910|RAB GTPase activating protein 1-like	0.989727	CTCF.p2:2:0.990
chr19	12822970	12823085	reg1015958.p2	8.698	+	AY736034 TSC_hg19_v1_chr19_-_12807434 BC004290 AK302744 AK123037 NM_032301	-15603	-	TSC_hg19_v1_chr19_-_12792699 AK300498 NM_001930 NM_013406	-30314	-	TSC_hg19_v1_chr19_-_12792697 AK291553 AK304780	-30341	-	TSC_hg19_v1_chr19_-_12833356 BC063679 BC072420 NM_013433 BC018314 AK299485	10121	-	NM_001136196 TSC_hg19_v1_chr19_-_12833473	10456	-	TSC_hg19_v1_chr19_-_12834747 AF007748 AK056183 NM_001136195	11707	-	AY736034|FBXW9|84261|F-box and WD repeat domain containing 9##BC004290|FBXW9|84261|F-box and WD repeat domain containing 9##AK302744|FBXW9|84261|F-box and WD repeat domain containing 9##AK123037|FBXW9|84261|F-box and WD repeat domain containing 9##NM_032301|FBXW9|84261|F-box and WD repeat domain containing 9##AK300498|DHPS|1725|deoxyhypusine synthase##NM_001930|DHPS|1725|deoxyhypusine synthase##NM_013406|DHPS|1725|deoxyhypusine synthase##AK291553|DHPS|1725|deoxyhypusine synthase##AK304780|DHPS|1725|deoxyhypusine synthase##BC063679|TNPO2|30000|transportin 2##BC072420|TNPO2|30000|transportin 2##NM_013433|TNPO2|30000|transportin 2##BC018314|TNPO2|30000|transportin 2##AK299485|TNPO2|30000|transportin 2##NM_001136196|TNPO2|30000|transportin 2##AF007748|TNPO2|30000|transportin 2##AK056183|TNPO2|30000|transportin 2##NM_001136195|TNPO2|30000|transportin 2	0.830069	CTCF.p2:-6:0.830
chr1	172104365	172104471	reg1014348.p1	8.697	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-293715	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-353580	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-353604	+	AL035295 NM_139240 BC038410	285410	+	TSC_hg19_v1_chr1_-_172413202 BC006539	308770	-	TSC_hg19_v1_chr1_-_172413207 AK308201	308789	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.076419	
chr20	47252459	47252595	reg1017396.p1	8.697	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-837209	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-837775	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1121843	+	AB037836 TSC_hg19_v1_chr20_-_47444291	191759	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	191912	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	285791	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.999392	CTCF.p2:-17:0.999
chr21	38539123	38539252	reg1016162.p1	8.697	+	D83077 NM_003316	-83941	+	TSC_hg19_v1_chr21_+_38445570 AK297921 BC092466 NM_001001894 AK291992 AK299991	-93570	+	AB035742 AB037162 TSC_hg19_v1_chr21_-_38445400 NM_153682	-93764	-	BC029827 TSC_hg19_v1_chr21_+_38593064	53872	+	TSC_hg19_v1_chr21_-_38639617 AK316460 AK299662	100421	-	TSC_hg19_v1_chr21_-_38639642 AJ001867 AK300024 AK312707 D87343 NM_006052 AK303624	100641	-	D83077|TTC3|7267|tetratricopeptide repeat domain 3##NM_003316|TTC3|7267|tetratricopeptide repeat domain 3##AK297921|TTC3|7267|tetratricopeptide repeat domain 3##BC092466|TTC3|7267|tetratricopeptide repeat domain 3##NM_001001894|TTC3|7267|tetratricopeptide repeat domain 3##AK291992|TTC3|7267|tetratricopeptide repeat domain 3##AK299991|TTC3|7267|tetratricopeptide repeat domain 3##AB035742|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB037162|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##NM_153682|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##BC029827|DSCR9|257203|Down syndrome critical region gene 9 (non-protein coding)##AK316460|DSCR3|10311|Down syndrome critical region gene 3##AK299662|DSCR3|10311|Down syndrome critical region gene 3##AJ001867|DSCR3|10311|Down syndrome critical region gene 3##AK300024|DSCR3|10311|Down syndrome critical region gene 3##AK312707|DSCR3|10311|Down syndrome critical region gene 3##D87343|DSCR3|10311|Down syndrome critical region gene 3##NM_006052|DSCR3|10311|Down syndrome critical region gene 3##AK303624|DSCR3|10311|Down syndrome critical region gene 3	0.7467	CTCF.p2:-10:0.747
chr14	71789493	71789629	reg1015888.p1	8.696	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-415110	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-415428	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-513752	-	AF090989 AF090990 NM_015556	206480	+	AK294895 NM_001204423	609255	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	609592	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.039315	
chr15	45751096	45751231	reg1001430.p4	8.696	+	NM_032413 NM_197955 TSC_hg19_v1_chr15_+_45722808 AF228422 AK026298 BC021173 AB026707	-28366	+	NM_024063 TSC_hg19_v1_chr15_+_45694551 AK291457 AK023232 AK225463 BC051861 BC000981 AK022348	-56611	+	TSC_hg19_v1_chr15_-_45670958 NM_001482	-80196	-	BC026089 NM_013309 TSC_hg19_v1_chr15_-_45815017	63847	-	AF080470 NM_012388 TSC_hg19_v1_chr15_+_45879539 AK091740	128323	+	TSC_hg19_v1_chr15_+_45879576 AK057545 BC004819 AK315581 AB527698	128444	+	NM_032413|C15orf48|84419|chromosome 15 open reading frame 48##NM_197955|C15orf48|84419|chromosome 15 open reading frame 48##AF228422|C15orf48|84419|chromosome 15 open reading frame 48##AK026298|C15orf48|84419|chromosome 15 open reading frame 48##BC021173|C15orf48|84419|chromosome 15 open reading frame 48##AB026707|C15orf48|84419|chromosome 15 open reading frame 48##NM_024063|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK291457|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK023232|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK225463|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC051861|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC000981|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK022348|SPATA5L1|79029|spermatogenesis associated 5-like 1##NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC026089|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##NM_013309|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##AF080470|PLDN|26258|pallidin homolog (mouse)##NM_012388|PLDN|26258|pallidin homolog (mouse)##AK057545|PLDN|26258|pallidin homolog (mouse)##BC004819|PLDN|26258|pallidin homolog (mouse)##AK315581|PLDN|26258|pallidin homolog (mouse)	0.664167	CTCF.p2:-5:0.664
chr2	188003093	188003232	reg1014541.p1	8.696	+	AK128006 BC031094 NM_182521	-289266	-	TSC_hg19_v1_chr2_+_187558788 AK091423 AK289737 AX746973 BC060872 NM_177454 AF361495 CU687488	-444386	+	AK302990 NM_001144999	-538231	+	DQ280491 U17473 L76380 AK291630 AK292998 DQ280490 NM_005795	309784	-	J03225 AF021834 TSC_hg19_v1_chr2_-_188419163 AK313562 BC015514 BC014332	415948	-	TSC_hg19_v1_chr2_-_188419185 NM_001032281 NM_006287	416039	-	AK128006|ZSWIM2|151112|zinc finger, SWIM-type containing 2##BC031094|ZSWIM2|151112|zinc finger, SWIM-type containing 2##NM_182521|ZSWIM2|151112|zinc finger, SWIM-type containing 2##AK091423|FAM171B|165215|family with sequence similarity 171, member B##AK289737|FAM171B|165215|family with sequence similarity 171, member B##BC060872|FAM171B|165215|family with sequence similarity 171, member B##NM_177454|FAM171B|165215|family with sequence similarity 171, member B##AF361495|FAM171B|165215|family with sequence similarity 171, member B##AK302990|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##NM_001144999|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##DQ280491|CALCRL|10203|calcitonin receptor-like##U17473|CALCRL|10203|calcitonin receptor-like##L76380|CALCRL|10203|calcitonin receptor-like##AK291630|CALCRL|10203|calcitonin receptor-like##AK292998|CALCRL|10203|calcitonin receptor-like##NM_005795|CALCRL|10203|calcitonin receptor-like##J03225|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AF021834|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK313562|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC015514|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC014332|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)	0.912275	CTCF.p2:2:0.912
chr9	88732	88861	reg1014110.p2	8.696	+	AK289708 NM_182905	-59058	-	None	None	None	None	None	None	BC089432 NM_207305	29620	-	AY295766 CU675219 HQ258394 AK315855 BC132759 AK297292 TSC_hg19_v1_chr9_-_179017 AY320414 BC009573 AF257330 AY343911 BC013432 AK290648 BC005996 NM_001145355 NM_001145356 NM_018491	90197	-	TSC_hg19_v1_chr9_+_214847 BC043265	126035	+	AK289708|WASH1|100287171|WAS protein family homolog 1##NM_182905|WASH1|100287171|WAS protein family homolog 1##BC089432|FOXD4|2298|forkhead box D4##NM_207305|FOXD4|2298|forkhead box D4##AY295766|CBWD1|55871|COBW domain containing 1##HQ258394|CBWD1|55871|COBW domain containing 1##AK315855|CBWD1|55871|COBW domain containing 1##BC132759|CBWD1|55871|COBW domain containing 1##AK297292|CBWD1|55871|COBW domain containing 1##AY320414|CBWD1|55871|COBW domain containing 1##BC009573|CBWD1|55871|COBW domain containing 1##AF257330|CBWD1|55871|COBW domain containing 1##AY343911|CBWD1|55871|COBW domain containing 1##BC013432|CBWD1|55871|COBW domain containing 1##AK290648|CBWD1|55871|COBW domain containing 1##BC005996|CBWD1|55871|COBW domain containing 1##NM_001145355|CBWD1|55871|COBW domain containing 1##NM_001145356|CBWD1|55871|COBW domain containing 1##NM_018491|CBWD1|55871|COBW domain containing 1##BC043265|DOCK8|81704|dedicator of cytokinesis 8	0.011183	
chr15	47763786	47763906	reg1014240.p1	8.695	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	-287459	+	TSC_hg19_v1_chr15_+_45927245 AK222463 AF042284 NM_021199 AF151802 AK313111 BC016836	-1836597	+	TSC_hg19_v1_chr15_+_45879759 AK128626	-1884073	+	TSC_hg19_v1_chr15_+_48009541 AK290032	245742	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	246839	+	AF348468 NM_205850 BC110836 BC113628 BC113630 BC143950 DQ665306 DQ665307 HQ258279	649358	+	AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK222463|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF042284|SQRDL|58472|sulfide quinone reductase-like (yeast)##NM_021199|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF151802|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK313111|SQRDL|58472|sulfide quinone reductase-like (yeast)##BC016836|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK128626|PLDN|26258|pallidin homolog (mouse)##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF348468|SLC24A5|283652|solute carrier family 24, member 5##NM_205850|SLC24A5|283652|solute carrier family 24, member 5##BC113628|SLC24A5|283652|solute carrier family 24, member 5##BC113630|SLC24A5|283652|solute carrier family 24, member 5##BC143950|SLC24A5|283652|solute carrier family 24, member 5##DQ665306|SLC24A5|283652|solute carrier family 24, member 5##DQ665307|SLC24A5|283652|solute carrier family 24, member 5##HQ258279|SLC24A5|283652|solute carrier family 24, member 5	0.600925	CTCF.p2:-12:0.601
chr6	10429984	10430097	reg1014457.p2	8.695	+	AK296737 NM_001042425	-10249	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	-14572	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	-14765	-	AK307373 NM_145649 AK291767 AK310216 AL832714	91568	+	NM_001491	125908	+	AK313426 BX647668 NM_145655 BX647576 AL832719 BC130524	155974	+	AK296737|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001042425|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##AK307373|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145649|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK291767|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK310216|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832714|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK313426|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647668|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145655|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647576|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832719|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BC130524|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	0.222265	CTCF.p2:7:0.203
chr11	3438358	3438474	reg1016429.p1	8.694	+	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	-38037	-	AK293940 NM_001039165	-184801	-	AB529240 AY255583 NM_001164377	-198374	-	NM_053017 NM_001079536 Y16835	225098	-	BC017828 BC069102 NM_004314 S74683 BC111729	227954	+	AB528800 AJ278118 AJ295237 BC136250 BC143303 AF199235 NM_020402	254162	-	BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195##AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##NM_053017|ART5|116969|ADP-ribosyltransferase 5##NM_001079536|ART5|116969|ADP-ribosyltransferase 5##Y16835|ART5|116969|ADP-ribosyltransferase 5##BC017828|ART1|417|ADP-ribosyltransferase 1##BC069102|ART1|417|ADP-ribosyltransferase 1##NM_004314|ART1|417|ADP-ribosyltransferase 1##S74683|ART1|417|ADP-ribosyltransferase 1##BC111729|ART1|417|ADP-ribosyltransferase 1##AJ278118|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AJ295237|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC136250|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC143303|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AF199235|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##NM_020402|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10	0.989712	CTCF.p2:0:0.990
chr3	169907041	169907156	reg1015625.p1	8.694	+	TSC_hg19_v1_chr3_-_169899522 AK022791 BC022325 AK300151 AK302371 BC070164 AK304411 NM_024947	-7570	-	TSC_hg19_v1_chr3_-_169899511 BC112944 BC131773 BX647868 EF560717 AF380154 AJ320486 AK023029 BC131772	-7653	-	TSC_hg19_v1_chr3_+_169755984 AK311293	-151146	+	TSC_hg19_v1_chr3_+_169940214 NM_002740 L18964	33119	+	TSC_hg19_v1_chr3_+_169940223 BC022016	33131	+	TSC_hg19_v1_chr3_+_169940250 L33881 AK315342 AB590674 AB451443	33267	+	AK022791|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC022325|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AK300151|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC070164|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AK304411|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##NM_024947|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC112944|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC131773|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BX647868|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##EF560717|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AF380154|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AJ320486|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AK023029|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC131772|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AK311293|GPR160|26996|G protein-coupled receptor 160##NM_002740|PRKCI|5584|protein kinase C, iota##L18964|PRKCI|5584|protein kinase C, iota##BC022016|PRKCI|5584|protein kinase C, iota##L33881|PRKCI|5584|protein kinase C, iota##AK315342|PRKCI|5584|protein kinase C, iota##AB451443|PRKCI|5584|protein kinase C, iota	0.856464	CTCF.p2:-12:0.856
chr4	78288135	78288252	reg1014528.p1	8.694	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-208700	+	TSC_hg19_v1_chr4_+_78078398 U47414	-209733	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	-209832	+	AF044197 NM_006419	144712	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	452351	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	495721	+	L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1	1.508545	CTCF.p2:15:0.999	CTCF.p2:96:0.462
chr5	118357780	118357898	reg1015338.p1	8.694	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	-33601	-	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-2447325	-	TSC_hg19_v1_chr5_+_115898220 D28352	-2459615	+	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	48972	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	49326	+	NM_001077654 TSC_hg19_v1_chr5_+_118604492 AK097884 AK001931	246619	+	BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1##NM_001077654|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK097884|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001931|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8	0.976969	CTCF.p2:-16:0.977
chrX	139223725	139223825	reg1014099.p1	8.694	+	BC137148 BC137149 NM_001013403	-176099	-	BC132728 BC132730 AJ580093 AJ580094 NM_001010986 NM_173694	-309360	-	AK302957 AK316416 NM_001099855 NM_001171876	-433421	-	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	363477	-	TSC_hg19_v1_chrX_+_139791923 AK054978	568152	+	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	642877	-	BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##BC132728|ATP11C|286410|ATPase, class VI, type 11C##BC132730|ATP11C|286410|ATPase, class VI, type 11C##AJ580093|ATP11C|286410|ATPase, class VI, type 11C##AJ580094|ATP11C|286410|ATPase, class VI, type 11C##NM_001010986|ATP11C|286410|ATPase, class VI, type 11C##NM_173694|ATP11C|286410|ATPase, class VI, type 11C##AK302957|MCF2|4168|MCF.2 cell line derived transforming sequence##AK316416|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001099855|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171876|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	0.909501	CTCF.p2:2:0.910
chr11	13174399	13174526	reg1016917.p1	8.692	+	TSC_hg19_v1_chr11_+_13030883 NM_001080521	-143538	+	TSC_hg19_v1_chr11_+_12960793 AK075236	-213651	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	-478499	+	TSC_hg19_v1_chr11_+_13299288 NM_001030272 NM_001030273 NM_001178	124830	+	TSC_hg19_v1_chr11_+_13299331 AK315174	124870	+	BC041129 TSC_hg19_v1_chr11_+_13299351 AK291510	124896	+	NM_001080521|RASSF10|644943|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_001030272|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001030273|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001178|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK315174|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##BC041129|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK291510|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like	0.874596	CTCF.p2:22:0.875
chr7	90917675	90917790	reg1015887.p1	8.692	+	TSC_hg19_v1_chr7_+_90893747 AB017363 NM_003505 AF072872 BC051271 AK314996	-23856	+	BC017719 TSC_hg19_v1_chr7_+_90893724	-24031	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	-578572	+	TSC_hg19_v1_chr7_-_91509979 BC108648 AL832861 AK298469 AK313641 NM_006980 Y09615 AK222730 AK311568	592283	-	TSC_hg19_v1_chr7_+_91570181 NM_005751 NM_147185 AJ131693 AF026245 BC015533 AB019691 AY803272 CU677341	652549	+	AB590319 CU689330 DQ891311 DQ894495 TSC_hg19_v1_chr7_-_91763765 D55653 BC018429	845990	-	AB017363|FZD1|8321|frizzled family receptor 1##NM_003505|FZD1|8321|frizzled family receptor 1##AF072872|FZD1|8321|frizzled family receptor 1##BC051271|FZD1|8321|frizzled family receptor 1##AK314996|FZD1|8321|frizzled family receptor 1##BC017719|FZD1|8321|frizzled family receptor 1##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14##BC108648|MTERF|7978|mitochondrial transcription termination factor##AL832861|MTERF|7978|mitochondrial transcription termination factor##AK298469|MTERF|7978|mitochondrial transcription termination factor##AK313641|MTERF|7978|mitochondrial transcription termination factor##NM_006980|MTERF|7978|mitochondrial transcription termination factor##Y09615|MTERF|7978|mitochondrial transcription termination factor##AK222730|MTERF|7978|mitochondrial transcription termination factor##NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##DQ891311|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##DQ894495|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##D55653|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##BC018429|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1	0.994304	CTCF.p2:12:0.994
chr10	78744689	78744808	reg1014081.p1	8.691	+	AF267860 NM_032024	-1202230	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1583183	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1583267	-	AF118141 TSC_hg19_v1_chr10_-_79397246	652477	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	652588	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	652658	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.999095	CTCF.p2:13:0.999
chr1	222344516	222344625	reg1013791.p1	8.691	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-429084	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-429140	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-429162	-	AY358602 BC007638 BC016552 NM_024746	376864	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	418607	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	446830	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.609709	CTCF.p2:16:0.610
chr20	36985077	36985226	reg1017253.p1	8.691	+	TSC_hg19_v1_chr20_+_36974884 AK313625 BC022256 NM_004139 AY344471 AF105067 AB590524 CU692512 DQ891394 DQ894434 M35533	-10280	+	NM_001725 BC040955 TSC_hg19_v1_chr20_+_36932591 AK315328 AX713278 AX746123 AX752831 J04739 AK296568 BC032230 CU691936 DQ414688 AF322588	-52563	+	AK096202 NM_001029864	-95978	-	TSC_hg19_v1_chr20_-_37063964 BC012894 BC052370 BC032119 BX640887	78821	-	TSC_hg19_v1_chr20_+_37075314 AK055434 AK290212 AF454939 AF497716 BC021083 BC040237	90176	+	TSC_hg19_v1_chr20_+_37101489 AB033045 BC047482 NM_020336 AK304242 CR936800	116357	+	AK313625|LBP|3929|lipopolysaccharide binding protein##BC022256|LBP|3929|lipopolysaccharide binding protein##NM_004139|LBP|3929|lipopolysaccharide binding protein##AY344471|LBP|3929|lipopolysaccharide binding protein##AF105067|LBP|3929|lipopolysaccharide binding protein##DQ891394|LBP|3929|lipopolysaccharide binding protein##DQ894434|LBP|3929|lipopolysaccharide binding protein##M35533|LBP|3929|lipopolysaccharide binding protein##NM_001725|BPI|671|bactericidal/permeability-increasing protein##BC040955|BPI|671|bactericidal/permeability-increasing protein##AK315328|BPI|671|bactericidal/permeability-increasing protein##AX713278|BPI|671|bactericidal/permeability-increasing protein##AX746123|BPI|671|bactericidal/permeability-increasing protein##AX752831|BPI|671|bactericidal/permeability-increasing protein##J04739|BPI|671|bactericidal/permeability-increasing protein##AK296568|BPI|671|bactericidal/permeability-increasing protein##BC032230|BPI|671|bactericidal/permeability-increasing protein##DQ414688|BPI|671|bactericidal/permeability-increasing protein##AF322588|BPI|671|bactericidal/permeability-increasing protein##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755##BC012894|LOC388796|388796|uncharacterized LOC388796##BC052370|LOC388796|388796|uncharacterized LOC388796##BC032119|LOC388796|388796|uncharacterized LOC388796##BX640887|LOC388796|388796|uncharacterized LOC388796##AK055434|SNHG11|128439|small nucleolar RNA host gene 11 (non-protein coding)##BC040237|SNHG11|128439|small nucleolar RNA host gene 11 (non-protein coding)##AB033045|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##BC047482|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##NM_020336|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##AK304242|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##CR936800|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	0.989266	CTCF.p2:2:0.989
chr2	10264801	10264911	reg1014193.p1	8.691	+	TSC_hg19_v1_chr2_+_10262865 NM_001034 AK092671 AK123010 AK313719 BC030154 BC001886 DQ891863 DQ895052 AB529158	-1967	+	NM_001165931 S40301 X59618 TSC_hg19_v1_chr2_+_10262805	-2097	+	TSC_hg19_v1_chr2_-_10220367 AB590068 AF544983 NM_001037160	-44427	-	BC093999 BC094001 NM_182626	17123	+	TSC_hg19_v1_chr2_+_10443043 BC017482 NM_002149 BC009846 BC017028	178193	+	AK000596 NM_134421	178969	+	NM_001034|RRM2|6241|ribonucleotide reductase M2##AK092671|RRM2|6241|ribonucleotide reductase M2##AK123010|RRM2|6241|ribonucleotide reductase M2##AK313719|RRM2|6241|ribonucleotide reductase M2##BC030154|RRM2|6241|ribonucleotide reductase M2##BC001886|RRM2|6241|ribonucleotide reductase M2##DQ891863|RRM2|6241|ribonucleotide reductase M2##DQ895052|RRM2|6241|ribonucleotide reductase M2##NM_001165931|RRM2|6241|ribonucleotide reductase M2##S40301|RRM2|6241|ribonucleotide reductase M2##X59618|RRM2|6241|ribonucleotide reductase M2##AF544983|CYS1|192668|cystin 1##NM_001037160|CYS1|192668|cystin 1##BC093999|C2orf48|348738|chromosome 2 open reading frame 48##BC094001|C2orf48|348738|chromosome 2 open reading frame 48##NM_182626|C2orf48|348738|chromosome 2 open reading frame 48##BC017482|HPCAL1|3241|hippocalcin-like 1##NM_002149|HPCAL1|3241|hippocalcin-like 1##BC009846|HPCAL1|3241|hippocalcin-like 1##BC017028|HPCAL1|3241|hippocalcin-like 1##AK000596|HPCAL1|3241|hippocalcin-like 1##NM_134421|HPCAL1|3241|hippocalcin-like 1	0.984946	CTCF.p2:-13:0.985
chr5	153354108	153354223	reg1012530.p1	8.691	+	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	-483900	+	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	-1569414	-	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	-2049803	-	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	64292	-	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	64359	+	TSC_hg19_v1_chr5_+_153418558 AK315573 BC026244	64395	+	NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3##AK315573|MFAP3|4238|microfibrillar-associated protein 3##BC026244|MFAP3|4238|microfibrillar-associated protein 3	0.999213	CTCF.p2:-27:0.985
chr15	46082645	46082777	reg1017101.p1	8.690	+	TSC_hg19_v1_chr15_+_45927245 AK222463 AF042284 NM_021199 AF151802 AK313111 BC016836	-155462	+	TSC_hg19_v1_chr15_+_45879759 AK128626	-202938	+	TSC_hg19_v1_chr15_+_45879576 AK057545 BC004819 AK315581 AB527698	-203104	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	1393676	+	TSC_hg19_v1_chr15_+_48009541 AK290032	1926877	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	1927974	+	AK222463|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF042284|SQRDL|58472|sulfide quinone reductase-like (yeast)##NM_021199|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF151802|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK313111|SQRDL|58472|sulfide quinone reductase-like (yeast)##BC016836|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK128626|PLDN|26258|pallidin homolog (mouse)##AK057545|PLDN|26258|pallidin homolog (mouse)##BC004819|PLDN|26258|pallidin homolog (mouse)##AK315581|PLDN|26258|pallidin homolog (mouse)##AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	0.994465	CTCF.p2:14:0.994
chr8	107845735	107845864	reg1014315.p2	8.689	+	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	-63355	-	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	-107444	+	TSC_hg19_v1_chr8_+_107670114 AK292899 BC032710 BC019691	-175684	+	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	664389	-	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	1250075	-	AB527268 CR457029 CR542275 CU674376 CU677689 CU678957 DQ892278 DQ895478 BC000734 TSC_hg19_v1_chr8_-_109260938 U54562 U85947	1415135	-	AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AK292899|OXR1|55074|oxidation resistance 1##BC032710|OXR1|55074|oxidation resistance 1##BC019691|OXR1|55074|oxidation resistance 1##U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2##CR457029|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR542275|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ892278|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ895478|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC000734|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U54562|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U85947|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E	0.966773	CTCF.p2:9:0.967
chrY	59299696	59299800	reg1014558.p1	8.689	+	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	-85751	+	AK289543 AK311508 NM_005840 AK125483	-199308	+	AK292375 BC033041 NM_001003894 NM_001003895 NM_004680 NM_170723 AK292318 AF000981 AF080597	-31531474	+	M84747 NM_002186 AK303178 BC025298 BC051337 S71404 CU690808	30599	+	None	None	None	None	None	None	NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7##AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK292375|CDY1|9085|chromodomain protein, Y-linked, 1##BC033041|CDY1|9085|chromodomain protein, Y-linked, 1##NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1##NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1##AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B##AF000981|CDY1|9085|chromodomain protein, Y-linked, 1##AF080597|CDY1|9085|chromodomain protein, Y-linked, 1##M84747|IL9R|3581|interleukin 9 receptor##NM_002186|IL9R|3581|interleukin 9 receptor##AK303178|IL9R|3581|interleukin 9 receptor##BC025298|IL9R|3581|interleukin 9 receptor##BC051337|IL9R|3581|interleukin 9 receptor##S71404|IL9R|3581|interleukin 9 receptor	0.822508	CTCF.p2:10:0.674
chr2	135655648	135655773	reg1017538.p1	8.688	+	AK125008 NM_138326 BC016018 BC107420 AB071418	-59492	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	-179154	-	NM_002410 D17716 AF113921	-643825	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	20687	+	TSC_hg19_v1_chr2_+_135676409 AF048732	20709	+	BC137276 BC137277 BC144555 AY574901 AY574902 AY574903 AY574904 AY574905 NM_001018046 NM_025052	126536	-	AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2##AF048732|CCNT2|905|cyclin T2##BC137276|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##BC137277|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##BC144555|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574901|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574902|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574903|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574904|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574905|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##NM_001018046|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##NM_025052|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)	0.987507	CTCF.p2:3:0.988
chr3	51428450	51428581	reg1016618.p1	8.688	+	TSC_hg19_v1_chr3_+_51422721 BC113588 BC113590 AK292243 BC007282 BT007110 EU832655 EU832733 BC033055	-5734	+	NM_006010 TSC_hg19_v1_chr3_+_51422691	-5824	+	AY254099 NM_004947 AY145303	-715833	+	NM_013286 TSC_hg19_v1_chr3_+_51428706	187	+	TSC_hg19_v1_chr3_+_51428730 BC121184 BC139836	235	+	BC022792 TSC_hg19_v1_chr3_-_51533986	105434	-	BC113588|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113590|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AK292243|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC007282|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BT007110|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832655|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832733|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC033055|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##NM_006010|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AY254099|DOCK3|1795|dedicator of cytokinesis 3##NM_004947|DOCK3|1795|dedicator of cytokinesis 3##AY145303|DOCK3|1795|dedicator of cytokinesis 3##NM_013286|RBM15B|29890|RNA binding motif protein 15B##BC121184|RBM15B|29890|RNA binding motif protein 15B##BC139836|RBM15B|29890|RNA binding motif protein 15B##BC022792|VPRBP|9730|Vpr (HIV-1) binding protein	0.010679	
chr7	5324698	5324808	reg1015853.p2	8.688	+	TSC_hg19_v1_chr7_+_5322595 AY485959 NM_001040661 NM_153247 AK092242 AX747426 AK296278 BC047592 BC025325	-2147	+	BC016912 AF151808 NM_001033520 AY691426	-70861	+	TSC_hg19_v1_chr7_+_5229923 AB463348 AM392901 AM393618 AM393628 CU675721 AY691425 CR533530	-94768	+	TSC_hg19_v1_chr7_-_5460842 BC140723	136153	-	AY129022 TSC_hg19_v1_chr7_-_5461555	136788	-	NM_001080495	138423	-	AY485959|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##NM_001040661|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##NM_153247|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AK092242|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AK296278|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC047592|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC025325|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC016912|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AF151808|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033520|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY691426|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM392901|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM393618|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM393628|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY691425|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##CR533530|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY129022|TNRC18|84629|trinucleotide repeat containing 18##NM_001080495|TNRC18|84629|trinucleotide repeat containing 18	0.0	
chr11	555004	555105	reg1015735.p1	8.686	+	NM_198075 TSC_hg19_v1_chr11_+_537526 BC035936 BC035937	-17528	+	TSC_hg19_v1_chr11_-_535567 BC006499 NM_001130442 NM_005343 NM_176795	-19491	-	TSC_hg19_v1_chr11_-_507243 NM_203386 NM_203387 NM_203388 NM_203389	-47789	-	TSC_hg19_v1_chr11_-_560721 BC039077 NM_173573	5688	-	TSC_hg19_v1_chr11_+_560986 NM_001143993	5922	+	BC106921 BC106922 M91083 NM_001143994 NM_003475	6395	+	NM_198075|LRRC56|115399|leucine rich repeat containing 56##BC035936|LRRC56|115399|leucine rich repeat containing 56##BC035937|LRRC56|115399|leucine rich repeat containing 56##BC006499|HRAS|3265|v-Ha-ras Harvey rat sarcoma viral oncogene homolog##NM_001130442|HRAS|3265|v-Ha-ras Harvey rat sarcoma viral oncogene homolog##NM_005343|HRAS|3265|v-Ha-ras Harvey rat sarcoma viral oncogene homolog##NM_176795|HRAS|3265|v-Ha-ras Harvey rat sarcoma viral oncogene homolog##NM_203386|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203387|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203388|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203389|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC039077|C11orf35|256329|chromosome 11 open reading frame 35##NM_173573|C11orf35|256329|chromosome 11 open reading frame 35##NM_001143993|RASSF7|8045|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7##BC106921|RASSF7|8045|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7##BC106922|RASSF7|8045|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7##M91083|RASSF7|8045|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7##NM_001143994|RASSF7|8045|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7##NM_003475|RASSF7|8045|Ras association (RalGDS/AF-6) domain family (N-terminal) member 7	0.997021	CTCF.p2:23:0.997
chr9	132386537	132386685	reg1018870.p1	8.686	+	BC112353 AK093122 AX747938 NM_199350	-3574	-	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	-135170	+	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	-135257	+	TSC_hg19_v1_chr9_+_132388441 NM_014064 AK290957 AK292332 AK298840 AK307056 AK313829	1814	+	TSC_hg19_v1_chr9_+_132388461 BC001396 BC033234 AF110776	1859	+	CU688098 EU831817 EU831894 BC065913 TSC_hg19_v1_chr9_-_132404419 AK023004 BC001719 AK225618 AK299193 AK000555 AK292807 NM_001202403 NM_017873 NM_177999	17758	-	BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##NM_014064|METTL11A|28989|methyltransferase like 11A##AK290957|METTL11A|28989|methyltransferase like 11A##AK292332|METTL11A|28989|methyltransferase like 11A##AK298840|METTL11A|28989|methyltransferase like 11A##AK307056|METTL11A|28989|methyltransferase like 11A##AK313829|METTL11A|28989|methyltransferase like 11A##BC001396|METTL11A|28989|methyltransferase like 11A##BC033234|METTL11A|28989|methyltransferase like 11A##AF110776|METTL11A|28989|methyltransferase like 11A##EU831817|ASB6|140459|ankyrin repeat and SOCS box containing 6##EU831894|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC065913|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK023004|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC001719|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK225618|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK299193|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK000555|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK292807|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_001202403|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_017873|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_177999|ASB6|140459|ankyrin repeat and SOCS box containing 6	0.901874	CTCF.p2:2:0.902
chr20	21552854	21552984	reg1015155.p2	8.684	+	NM_002509	-58256	-	NM_033176 TSC_hg19_v1_chr20_-_21378181	-174805	-	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	-268944	+	TSC_hg19_v1_chr20_+_21686296 NM_006192	133375	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	133614	+	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	1011997	-	NM_002509|NKX2-2|4821|NK2 homeobox 2##NM_033176|NKX2-4|644524|NK2 homeobox 4##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2##NM_006192|PAX1|5075|paired box 1##BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2	0.99971	CTCF.p2:2:1.000
chr1	91044896	91045025	reg1016612.p1	8.683	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	-584244	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-757396	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-757502	+	BC126439 BC126441 AY338397 NM_020063	137825	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	442078	-	TSC_hg19_v1_chr1_-_91487583 BC041138 AK291520	442603	-	NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644##BC041138|ZNF644|84146|zinc finger protein 644##AK291520|ZNF644|84146|zinc finger protein 644	0.99979	CTCF.p2:8:1.000
chr8	6429871	6429991	reg1013233.p1	8.683	+	HQ258258 AF187858 AB009865 BC126200 BC126202 BC143902 AF218015 BC022490 AK075219 AK225698 AK290070 AK310171 AK312541 NM_001118887 NM_001118888 NM_001147 TSC_hg19_v1_chr8_-_6420798 AJ289781	-9240	-	AK301702 TSC_hg19_v1_chr8_+_6264167	-165759	+	NM_001172574 NM_001172575 NM_024596 BC056195 BC030702 AK308387 TSC_hg19_v1_chr8_+_6264158	-165796	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	135960	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	136009	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	136252	+	HQ258258|ANGPT2|285|angiopoietin 2##AF187858|ANGPT2|285|angiopoietin 2##AB009865|ANGPT2|285|angiopoietin 2##BC126200|ANGPT2|285|angiopoietin 2##BC126202|ANGPT2|285|angiopoietin 2##BC143902|ANGPT2|285|angiopoietin 2##AF218015|ANGPT2|285|angiopoietin 2##BC022490|ANGPT2|285|angiopoietin 2##AK075219|ANGPT2|285|angiopoietin 2##AK225698|ANGPT2|285|angiopoietin 2##AK290070|ANGPT2|285|angiopoietin 2##AK310171|ANGPT2|285|angiopoietin 2##AK312541|ANGPT2|285|angiopoietin 2##NM_001118887|ANGPT2|285|angiopoietin 2##NM_001118888|ANGPT2|285|angiopoietin 2##NM_001147|ANGPT2|285|angiopoietin 2##AJ289781|ANGPT2|285|angiopoietin 2##AK301702|MCPH1|79648|microcephalin 1##NM_001172574|MCPH1|79648|microcephalin 1##NM_001172575|MCPH1|79648|microcephalin 1##NM_024596|MCPH1|79648|microcephalin 1##BC056195|MCPH1|79648|microcephalin 1##BC030702|MCPH1|79648|microcephalin 1##AK308387|MCPH1|79648|microcephalin 1##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	0.783882	CTCF.p2:0:0.784
chr19	20041329	20041461	reg1015905.p1	8.682	+	TSC_hg19_v1_chr19_+_20011754 NM_031218 BC020837 BC070372 BC107581 AK096342 BC058821 BC038096 BC136718 BC136719	-29611	+	TSC_hg19_v1_chr19_+_19976658 BC053607 BC014148 NM_021047 BC065572 AK074757 BC125063 BC125064	-64711	+	TSC_hg19_v1_chr19_-_19932557 AL136548 BC018100 BC034920 AK122848 AK095575 NM_001099269 NM_001145404	-108843	-	AK098164 NM_001077349	108643	-	AK027845 TSC_hg19_v1_chr19_-_20150315 AK096571 NM_033196	108902	-	TSC_hg19_v1_chr19_+_20188813 NM_007138 AK298173 M61870 BC137211	147442	+	NM_031218|ZNF93|81931|zinc finger protein 93##BC020837|ZNF93|81931|zinc finger protein 93##BC070372|ZNF93|81931|zinc finger protein 93##BC107581|ZNF93|81931|zinc finger protein 93##AK096342|ZNF93|81931|zinc finger protein 93##BC058821|ZNF93|81931|zinc finger protein 93##BC038096|ZNF93|81931|zinc finger protein 93##BC136718|ZNF93|81931|zinc finger protein 93##BC136719|ZNF93|81931|zinc finger protein 93##BC053607|ZNF253|56242|zinc finger protein 253##BC014148|ZNF253|56242|zinc finger protein 253##NM_021047|ZNF253|56242|zinc finger protein 253##BC065572|ZNF253|56242|zinc finger protein 253##AK074757|ZNF253|56242|zinc finger protein 253##BC125063|ZNF253|56242|zinc finger protein 253##BC125064|ZNF253|56242|zinc finger protein 253##AL136548|ZNF506|440515|zinc finger protein 506##BC018100|ZNF506|440515|zinc finger protein 506##BC034920|ZNF506|440515|zinc finger protein 506##AK122848|ZNF506|440515|zinc finger protein 506##AK095575|ZNF506|440515|zinc finger protein 506##NM_001099269|ZNF506|440515|zinc finger protein 506##NM_001145404|ZNF506|440515|zinc finger protein 506##AK098164|ZNF682|91120|zinc finger protein 682##NM_001077349|ZNF682|91120|zinc finger protein 682##AK027845|ZNF682|91120|zinc finger protein 682##AK096571|ZNF682|91120|zinc finger protein 682##NM_033196|ZNF682|91120|zinc finger protein 682##NM_007138|ZNF90|7643|zinc finger protein 90##AK298173|ZNF90|7643|zinc finger protein 90##M61870|ZNF90|7643|zinc finger protein 90##BC137211|ZNF90|7643|zinc finger protein 90	0.80299	CTCF.p2:20:0.803
chr5	136835046	136835148	reg1013870.p2	8.682	+	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	-117	-	TSC_hg19_v1_chr5_-_136834420 AK094489	-670	-	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	-856	-	AF208068 AK314707 TSC_hg19_v1_chr5_-_137071541 AB032955	236408	-	AK098190 BC034035 NM_017415 TSC_hg19_v1_chr5_-_137071807	236664	-	TSC_hg19_v1_chr5_-_137088952 BC012490	253859	-	AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AF208068|KLHL3|26249|kelch-like 3 (Drosophila)##AK314707|KLHL3|26249|kelch-like 3 (Drosophila)##AB032955|KLHL3|26249|kelch-like 3 (Drosophila)##BC034035|KLHL3|26249|kelch-like 3 (Drosophila)##NM_017415|KLHL3|26249|kelch-like 3 (Drosophila)##BC012490|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	0.99994	CTCF.p2:-1:1.000
chr7	73393574	73393685	reg1015974.p1	8.682	+	AY372053 BC030643 NM_182504 GQ129394 GQ129395 AY372054	-118105	+	TSC_hg19_v1_chr7_-_73256847 AK301597 AF534110 NM_152559 AY354928	-136767	-	NM_001305 TSC_hg19_v1_chr7_+_73245327 AK026651 AK124076 BC000671 AB000712	-148358	+	NM_000501 NM_001081752 NM_001081753 NM_001081754 NM_001081755 AK075554 TSC_hg19_v1_chr7_+_73442441 AK075494	48804	+	TSC_hg19_v1_chr7_+_73442462 AK125511 AK130894	48827	+	TSC_hg19_v1_chr7_+_73442469 M36860 X52896	48840	+	AY372053|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##BC030643|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##NM_182504|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129394|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129395|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##AY372054|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_001305|CLDN4|1364|claudin 4##AK026651|CLDN4|1364|claudin 4##AK124076|CLDN4|1364|claudin 4##BC000671|CLDN4|1364|claudin 4##AB000712|CLDN4|1364|claudin 4##NM_000501|ELN|2006|elastin##NM_001081752|ELN|2006|elastin##NM_001081753|ELN|2006|elastin##NM_001081754|ELN|2006|elastin##NM_001081755|ELN|2006|elastin##AK075554|ELN|2006|elastin##AK075494|ELN|2006|elastin##AK125511|ELN|2006|elastin##AK130894|ELN|2006|elastin##M36860|ELN|2006|elastin##X52896|ELN|2006|elastin	0.975376	CTCF.p2:15:0.958
chr8	61526502	61526654	reg1017638.p1	8.682	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-96828	+	TSC_hg19_v1_chr8_+_61429570 X12953 BC008929	-97014	+	TSC_hg19_v1_chr8_+_61429545 AK312344	-97032	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	64710	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	64824	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	673972	+	M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##X12953|RAB2A|5862|RAB2A, member RAS oncogene family##BC008929|RAB2A|5862|RAB2A, member RAS oncogene family##AK312344|RAB2A|5862|RAB2A, member RAS oncogene family##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1	0.998838	CTCF.p2:11:0.999
chr15	85388912	85389011	reg1015640.p2	8.681	+	AY044449 NM_020778	-29051	+	TSC_hg19_v1_chr15_+_85291875 BC094688	-97099	+	TSC_hg19_v1_chr15_+_85291820 NM_014630	-97136	+	AK291997 AK296075 AK298369 AK296074 AK296119 AK309571 AK311387 AK309578 AF309632 NM_004213 NM_201651 BC029788	38950	+	TSC_hg19_v1_chr15_+_85523735 BC060762 AK074280 NM_001243137	134741	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	136276	+	AY044449|ALPK3|57538|alpha-kinase 3##NM_020778|ALPK3|57538|alpha-kinase 3##BC094688|ZNF592|9640|zinc finger protein 592##NM_014630|ZNF592|9640|zinc finger protein 592##AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC060762|PDE8A|5151|phosphodiesterase 8A##AK074280|PDE8A|5151|phosphodiesterase 8A##NM_001243137|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A	0.961129	CTCF.p2:8:0.961
chr4	75548377	75548509	reg1016279.p1	8.681	+	BC009799 M30704 NM_001657	-67815	+	BC009799 M30704 NM_001657	-237591	+	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	-317503	+	BC011618 S55606 AB109441 NM_001729	171340	-	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	309929	+	TSC_hg19_v1_chr4_-_76439504 AK309555 AK308754 AB528599 AF247041 CU689096 CU690404 GQ129342 GQ129343 GQ250944 GQ250945 GQ250946 JF691538 JF691539 AB209072 AF255666 AY888047 GU937000 AF305424	891073	-	BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK309555|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK308754|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF247041|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129342|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129343|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250944|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250945|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250946|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AB209072|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF255666|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AY888047|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GU937000|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF305424|RCHY1|25898|ring finger and CHY zinc finger domain containing 1	0.590386	CTCF.p2:8:0.590
chr5	105457837	105457965	reg1015355.p2	8.681	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-2559420	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-2863444	+	BC024591 NM_015216 AB463068	-2992627	+	AK308672 NM_001962 U26403	1548689	-	TSC_hg19_v1_chr5_-_107717106 AK126722	2259229	-	BC063316 NM_001163315	2259897	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.999716	CTCF.p2:5:1.000
chr6	42277635	42277745	reg1014950.p1	8.681	+	TSC_hg19_v1_chr6_-_42185603 NM_018141	-92073	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-92090	-	TSC_hg19_v1_chr6_-_42185597 AK316599 BC012560	-92093	-	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	142133	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	254060	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	254087	+	NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##AK316599|MRPS10|55173|mitochondrial ribosomal protein S10##BC012560|MRPS10|55173|mitochondrial ribosomal protein S10##AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.044642	
chr6_ssto_hap7	4463404	4463525	reg1014102.p1	8.681	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.982461	CTCF.p2:-26:0.982
chr1	63429020	63429131	reg1015911.p1	8.680	+	TSC_hg19_v1_chr1_+_63249807 NM_032852 NM_178221 AK027773 BC018678 BC033024 BC008395	-179262	+	DQ341187 TSC_hg19_v1_chr1_-_63154045 AK055401 NM_033407 AK292640	-274948	-	NM_014495 AK315304 TSC_hg19_v1_chr1_+_63063190 AK289426 BC007059 BC058287 AY358273 AF152562 AB590604 CU691298	-365864	+	AB464527 NM_012183	359654	+	TSC_hg19_v1_chr1_+_63789065 L12142	360009	+	NM_013339 AF063604 TSC_hg19_v1_chr1_+_63833313	404212	+	NM_032852|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_178221|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##AK027773|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC018678|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC033024|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC008395|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##DQ341187|DOCK7|85440|dedicator of cytokinesis 7##AK055401|DOCK7|85440|dedicator of cytokinesis 7##NM_033407|DOCK7|85440|dedicator of cytokinesis 7##AK292640|DOCK7|85440|dedicator of cytokinesis 7##NM_014495|ANGPTL3|27329|angiopoietin-like 3##AK315304|ANGPTL3|27329|angiopoietin-like 3##AK289426|ANGPTL3|27329|angiopoietin-like 3##BC007059|ANGPTL3|27329|angiopoietin-like 3##BC058287|ANGPTL3|27329|angiopoietin-like 3##AY358273|ANGPTL3|27329|angiopoietin-like 3##AF152562|ANGPTL3|27329|angiopoietin-like 3##NM_012183|FOXD3|27022|forkhead box D3##L12142|FOXD3|27022|forkhead box D3##NM_013339|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF063604|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	0.930609	CTCF.p2:-23:0.931
chr5	18698764	18698884	reg1013923.p2	8.680	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-1480984	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-1481212	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-1762439	-	AK295087 BC031051 NM_001167667 NM_004934	1289498	-	TSC_hg19_v1_chr5_+_21459621 AK290693	2760785	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	2760824	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.711018	CTCF.p2:10:0.694
chr8	10282779	10282918	reg1018546.p1	8.680	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	-329785	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	-370969	+	TSC_hg19_v1_chr8_+_9911765 AY958429	-371079	+	BC033497 NM_001197020 NM_198464 AY358867	100219	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	229792	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	247311	+	AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AY958429|MSRA|4482|methionine sulfoxide reductase A##BC033497|PRSS55|203074|protease, serine, 55##NM_001197020|PRSS55|203074|protease, serine, 55##NM_198464|PRSS55|203074|protease, serine, 55##AY358867|PRSS55|203074|protease, serine, 55##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74	1.733412	CTCF.p2:10:0.993	CTCF.p2:89:0.741
chr1	21661319	21661430	reg1013110.p2	8.679	+	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	-44440	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	-44666	-	D43698 TSC_hg19_v1_chr1_-_21606025 BX648351 NM_001113347	-55291	-	X98272 TSC_hg19_v1_chr1_-_21671998 NM_001113348	10606	-	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	105308	+	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	174485	+	Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##D43698|ECE1|1889|endothelin converting enzyme 1##BX648351|ECE1|1889|endothelin converting enzyme 1##NM_001113347|ECE1|1889|endothelin converting enzyme 1##X98272|ECE1|1889|endothelin converting enzyme 1##NM_001113348|ECE1|1889|endothelin converting enzyme 1##AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney	0.889513	CTCF.p2:15:0.890
chr13	49323971	49324083	reg1015429.p1	8.679	+	AB041947 AB038269 BC096832 BC069160 NM_020377 AB590816	-43242	+	AK122778 TSC_hg19_v1_chr13_-_49110119	-213909	-	AB209543 TSC_hg19_v1_chr13_-_49107365	-216663	-	TSC_hg19_v1_chr13_+_49550058 AJ749706 NM_001079673 BX648706 BX648141 AK056071	226133	+	TSC_hg19_v1_chr13_+_49550791 BC051029	226694	+	TSC_hg19_v1_chr13_+_49550938 BX640739	226898	+	AB041947|CYSLTR2|57105|cysteinyl leukotriene receptor 2##AB038269|CYSLTR2|57105|cysteinyl leukotriene receptor 2##BC096832|CYSLTR2|57105|cysteinyl leukotriene receptor 2##BC069160|CYSLTR2|57105|cysteinyl leukotriene receptor 2##NM_020377|CYSLTR2|57105|cysteinyl leukotriene receptor 2##AK122778|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AB209543|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AJ749706|FNDC3A|22862|fibronectin type III domain containing 3A##NM_001079673|FNDC3A|22862|fibronectin type III domain containing 3A##BX648706|FNDC3A|22862|fibronectin type III domain containing 3A##BX648141|FNDC3A|22862|fibronectin type III domain containing 3A##AK056071|FNDC3A|22862|fibronectin type III domain containing 3A##BC051029|FNDC3A|22862|fibronectin type III domain containing 3A##BX640739|FNDC3A|22862|fibronectin type III domain containing 3A	0.826265	CTCF.p2:-3:0.813
chr15	43479898	43480032	reg1015767.p1	8.679	+	TSC_hg19_v1_chr15_+_43477636 AF082569 BC009689 AK075146 AK225645 AK290665 AK295017 AF246144 AF132034 AK225143 AB590193 CR450331 CU679441 DQ894124	-2308	+	TSC_hg19_v1_chr15_+_43477603 AK290707 AF087852	-2358	+	AK308817 TSC_hg19_v1_chr15_+_43477589 NM_012142	-2510	+	AB527822 AK297146 BC096093 BC096094 BC099627 TSC_hg19_v1_chr15_-_43513189	33141	-	TSC_hg19_v1_chr15_-_43513214 AK297663 M29399	33241	-	TSC_hg19_v1_chr15_-_43513234 M30646 M30647 NM_000119 NM_001114134	33313	-	AF082569|CCNDBP1|23582|cyclin D-type binding-protein 1##BC009689|CCNDBP1|23582|cyclin D-type binding-protein 1##AK075146|CCNDBP1|23582|cyclin D-type binding-protein 1##AK225645|CCNDBP1|23582|cyclin D-type binding-protein 1##AK290665|CCNDBP1|23582|cyclin D-type binding-protein 1##AK295017|CCNDBP1|23582|cyclin D-type binding-protein 1##AF246144|CCNDBP1|23582|cyclin D-type binding-protein 1##AF132034|CCNDBP1|23582|cyclin D-type binding-protein 1##AK225143|CCNDBP1|23582|cyclin D-type binding-protein 1##CR450331|CCNDBP1|23582|cyclin D-type binding-protein 1##DQ894124|CCNDBP1|23582|cyclin D-type binding-protein 1##AK290707|CCNDBP1|23582|cyclin D-type binding-protein 1##AF087852|CCNDBP1|23582|cyclin D-type binding-protein 1##AK308817|CCNDBP1|23582|cyclin D-type binding-protein 1##NM_012142|CCNDBP1|23582|cyclin D-type binding-protein 1##AK297146|EPB42|2038|erythrocyte membrane protein band 4.2##BC096093|EPB42|2038|erythrocyte membrane protein band 4.2##BC096094|EPB42|2038|erythrocyte membrane protein band 4.2##BC099627|EPB42|2038|erythrocyte membrane protein band 4.2##AK297663|EPB42|2038|erythrocyte membrane protein band 4.2##M29399|EPB42|2038|erythrocyte membrane protein band 4.2##M30646|EPB42|2038|erythrocyte membrane protein band 4.2##M30647|EPB42|2038|erythrocyte membrane protein band 4.2##NM_000119|EPB42|2038|erythrocyte membrane protein band 4.2##NM_001114134|EPB42|2038|erythrocyte membrane protein band 4.2	0.827585	CTCF.p2:-10:0.828
chr4	141559141	141559260	reg1014280.p2	8.679	+	U28480 BC069556 BC096736 BC098168 BC098258 BC098352 NM_021833	-69280	-	TSC_hg19_v1_chr4_+_141445351 BX648843 BC015168 AK093087	-113845	+	NM_153702 TSC_hg19_v1_chr4_+_141445321 AK312800 BX648349	-113884	+	NM_015130 TSC_hg19_v1_chr4_-_141677529	118299	-	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	495331	-	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	582855	+	U28480|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC069556|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC096736|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098168|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098258|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098352|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##NM_021833|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BX648843|ELMOD2|255520|ELMO/CED-12 domain containing 2##BC015168|ELMOD2|255520|ELMO/CED-12 domain containing 2##AK093087|ELMOD2|255520|ELMO/CED-12 domain containing 2##NM_153702|ELMOD2|255520|ELMO/CED-12 domain containing 2##AK312800|ELMOD2|255520|ELMO/CED-12 domain containing 2##BX648349|ELMOD2|255520|ELMO/CED-12 domain containing 2##NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)##AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330	0.987359	CTCF.p2:-7:0.987
chr11	18013486	18013615	reg1016596.p1	8.678	+	NM_001112741 NM_004976 AB529092	-256031	+	NM_002478 AK314968 TSC_hg19_v1_chr11_+_17741117 BC000353 X56677 BC064493 AB463907 BT007157	-272331	+	CU677569 TSC_hg19_v1_chr11_-_17565964 AK290788 AK300936 AB018687 BC016057 AF039699 AF039700 AK225614 NM_005709 NM_153676	-447633	-	TSC_hg19_v1_chr11_-_18034463 AK294022	20900	-	TSC_hg19_v1_chr11_-_18034595 AJ243950 AJ243951 BC000707 NM_012139	21013	-	BC065375 AK292286 TSC_hg19_v1_chr11_-_18034745	21166	-	NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_002478|MYOD1|4654|myogenic differentiation 1##AK314968|MYOD1|4654|myogenic differentiation 1##X56677|MYOD1|4654|myogenic differentiation 1##BC064493|MYOD1|4654|myogenic differentiation 1##BT007157|MYOD1|4654|myogenic differentiation 1##AK290788|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK300936|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AB018687|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##BC016057|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039699|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039700|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK225614|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_005709|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_153676|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK294022|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243950|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243951|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC000707|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##NM_012139|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC065375|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AK292286|SERGEF|26297|secretion regulating guanine nucleotide exchange factor	0.882535	CTCF.p2:-10:0.883
chr8	33497822	33497925	reg1014647.p2	8.678	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-40378	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	-40414	-	TSC_hg19_v1_chr8_-_33457295 BC067804	-40586	-	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	1595114	+	NM_001031836 AK302391 BC028701	3143997	+	TSC_hg19_v1_chr8_-_37457377 AK025743	3959495	-	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC067804|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AK025743|LOC157860|157860|uncharacterized LOC157860	0.539193	CTCF.p2:6:0.521
chr3	124911057	124911208	reg1018686.p1	8.676	+	BC063528 TSC_hg19_v1_chr3_-_124842461	-68677	-	AB384586 NM_020733 TSC_hg19_v1_chr3_-_124774842	-136332	-	BC067235 TSC_hg19_v1_chr3_-_124732404	-178740	-	AF345197 HQ258349 BC126158 BC126160 AF390442 NM_001195483	19085	-	AK123001 TSC_hg19_v1_chr3_-_124931591 AX721165 AK131070 NM_024628	20453	-	AF039019 AL833616 AF432210 AJ236885 L04282 BC035591 BC018971 AK314203 TSC_hg19_v1_chr3_-_125094153 BC050260 NM_021964	182968	-	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)##BC067235|HEG1|57493|HEG homolog 1 (zebrafish)##AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AK123001|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_024628|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF039019|ZNF148|7707|zinc finger protein 148##AL833616|ZNF148|7707|zinc finger protein 148##AF432210|ZNF148|7707|zinc finger protein 148##AJ236885|ZNF148|7707|zinc finger protein 148##L04282|ZNF148|7707|zinc finger protein 148##BC035591|ZNF148|7707|zinc finger protein 148##BC018971|ZNF148|7707|zinc finger protein 148##AK314203|ZNF148|7707|zinc finger protein 148##BC050260|ZNF148|7707|zinc finger protein 148##NM_021964|ZNF148|7707|zinc finger protein 148	0.041787	
chr3	56528862	56528986	reg1015657.p1	8.676	+	BC111550 BC112391 AB002376 NM_015576	-26547	-	TSC_hg19_v1_chr3_-_55521567 AK090582	-1007306	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-1007592	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	62278	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	62322	+	BC029354 NM_015224	169149	-	BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66##BC029354|FAM208A|23272|family with sequence similarity 208, member A##NM_015224|FAM208A|23272|family with sequence similarity 208, member A	1.333405	CTCF.p2:12:0.880	CTCF.p2:-19:0.453
chr19	42363586	42363716	reg1013349.p1	8.675	+	AK057404 AK301822 NM_001040283 BC039266 BC029202	-14580	+	AY358726 NM_173506	-15144	-	AK298694 NM_001815 D90277 D90278 L00692 L00693 BC106728	-63099	+	BC018616 NM_001022	336	+	TSC_hg19_v1_chr19_+_42364273 BC000023	625	+	TSC_hg19_v1_chr19_+_42364325 AK311786 BC017386 D28389 M81757	679	+	AK057404|DMRTC2|63946|DMRT-like family C2##AK301822|DMRTC2|63946|DMRT-like family C2##NM_001040283|DMRTC2|63946|DMRT-like family C2##BC039266|DMRTC2|63946|DMRT-like family C2##BC029202|DMRTC2|63946|DMRT-like family C2##AY358726|LYPD4|147719|LY6/PLAUR domain containing 4##NM_173506|LYPD4|147719|LY6/PLAUR domain containing 4##NM_001815|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90277|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90278|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00692|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00693|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##BC106728|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##BC018616|RPS19|6223|ribosomal protein S19##NM_001022|RPS19|6223|ribosomal protein S19##BC000023|RPS19|6223|ribosomal protein S19##AK311786|RPS19|6223|ribosomal protein S19##BC017386|RPS19|6223|ribosomal protein S19##M81757|RPS19|6223|ribosomal protein S19	0.237529	CTCF.p2:-6:0.238
chr22	37595622	37595750	reg1015680.p2	8.675	+	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	-11395	-	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	-49734	-	CR456446 TSC_hg19_v1_chr22_-_37505748	-90008	-	BC042068 NM_001051 AK291165	12697	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	44535	-	TSC_hg19_v1_chr22_-_37640315 AK096924 BC001485 NM_002872	44615	-	CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##CR456446|TMPRSS6|164656|transmembrane protease, serine 6##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##AK096924|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BC001485|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##NM_002872|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)	0.955623	CTCF.p2:-17:0.956
chr5	140099922	140100026	reg1015472.p1	8.675	+	TSC_hg19_v1_chr5_+_140080031 AK055683 BC056668 NM_144723	-19947	+	TSC_hg19_v1_chr5_+_140071221 AK293269 CU675755 DQ892641 EU176716	-28742	+	TSC_hg19_v1_chr5_+_140071198 BC007680 AK293390 AK312976 AK298661	-28804	+	AB384778 AF152305 AF152479 AF169695 NM_018900 NM_031410 NM_031411	65901	+	BC003126 NM_018905 NM_031495 AF152310 AF152480 CU678384	74522	+	AF152311 AF152481 BC069064 BC129807 NM_018906 NM_031497	80808	+	AK055683|ZMAT2|153527|zinc finger, matrin-type 2##BC056668|ZMAT2|153527|zinc finger, matrin-type 2##NM_144723|ZMAT2|153527|zinc finger, matrin-type 2##AK293269|HARS2|23438|histidyl-tRNA synthetase 2, mitochondrial (putative)##DQ892641|HARS2|23438|histidyl-tRNA synthetase 2, mitochondrial (putative)##EU176716|HARS2|23438|histidyl-tRNA synthetase 2, mitochondrial (putative)##BC007680|HARS2|23438|histidyl-tRNA synthetase 2, mitochondrial (putative)##AK293390|HARS2|23438|histidyl-tRNA synthetase 2, mitochondrial (putative)##AK312976|HARS2|23438|histidyl-tRNA synthetase 2, mitochondrial (putative)##AK298661|HARS2|23438|histidyl-tRNA synthetase 2, mitochondrial (putative)##AF152305|PCDHA1|56147|protocadherin alpha 1##AF152479|PCDHA1|56147|protocadherin alpha 1##AF169695|PCDHA1|56147|protocadherin alpha 1##NM_018900|PCDHA1|56147|protocadherin alpha 1##NM_031410|PCDHA1|56147|protocadherin alpha 1##NM_031411|PCDHA1|56147|protocadherin alpha 1##BC003126|PCDHA2|56146|protocadherin alpha 2##NM_018905|PCDHA2|56146|protocadherin alpha 2##NM_031495|PCDHA2|56146|protocadherin alpha 2##AF152310|PCDHA2|56146|protocadherin alpha 2##AF152480|PCDHA2|56146|protocadherin alpha 2##AF152311|PCDHA3|56145|protocadherin alpha 3##AF152481|PCDHA3|56145|protocadherin alpha 3##BC069064|PCDHA3|56145|protocadherin alpha 3##BC129807|PCDHA3|56145|protocadherin alpha 3##NM_018906|PCDHA3|56145|protocadherin alpha 3##NM_031497|PCDHA3|56145|protocadherin alpha 3	0.22401	CTCF.p2:-6:0.224
chr1	65681395	65681521	reg1013578.p1	8.674	+	TSC_hg19_v1_chr1_+_65613971 BC040224 BC136886 BC136887 BC148270 CR456830 CU688216 DQ892294 DQ895494	-67428	+	TSC_hg19_v1_chr1_+_65613835 NM_013410 AK025926 AK313611 X60673	-67610	+	TSC_hg19_v1_chr1_+_65613263 NM_203464 BC146653 BC016180 AK309057 BC066944 NM_001005353	-68097	+	TSC_hg19_v1_chr1_+_65720144 AK123450 BC051722	38661	+	AK296408 NM_014787 AB007942	48971	+	BC140007 NM_001198683 NM_017526 TSC_hg19_v1_chr1_+_65886266	204744	+	BC040224|AK4|205|adenylate kinase 4##BC136886|AK4|205|adenylate kinase 4##BC136887|AK4|205|adenylate kinase 4##BC148270|AK4|205|adenylate kinase 4##CR456830|AK4|205|adenylate kinase 4##DQ892294|AK4|205|adenylate kinase 4##DQ895494|AK4|205|adenylate kinase 4##NM_013410|AK4|205|adenylate kinase 4##AK025926|AK4|205|adenylate kinase 4##AK313611|AK4|205|adenylate kinase 4##X60673|AK4|205|adenylate kinase 4##NM_203464|AK4|205|adenylate kinase 4##BC146653|AK4|205|adenylate kinase 4##BC016180|AK4|205|adenylate kinase 4##AK309057|AK4|205|adenylate kinase 4##BC066944|AK4|205|adenylate kinase 4##NM_001005353|AK4|205|adenylate kinase 4##AK123450|LOC645195|645195|uncharacterized LOC645195##BC051722|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##BC140007|LEPROT|54741|leptin receptor overlapping transcript##NM_001198683|LEPROT|54741|leptin receptor overlapping transcript##NM_017526|LEPROT|54741|leptin receptor overlapping transcript	0.557185	CTCF.p2:-24:0.557
chr17	56655115	56655228	reg1015277.p2	8.674	+	AK097440 BC022189 NM_001038704	-33464	-	AK301914 AK302146 NM_001198713	-36993	-	BC018056 U88870 AK295527 AK315396 TSC_hg19_v1_chr17_-_56609427 AF176379 AK308957 NM_080415 NM_080416	-45753	-	AK308299 BC040526 AK125896 BC045647 AL834143 NM_001201457 NM_031272 NM_198393	114224	-	TSC_hg19_v1_chr17_+_56769933 BC107753	114764	+	TSC_hg19_v1_chr17_+_56769962 AF029669 AK290487 BC073161 NM_002876 NM_058216 BC064578 BC093930 BC101485 BC143259 BC000667 AF029670 AB528656 BT007339 AK129738 AK303363	114830	+	AK097440|C17orf47|284083|chromosome 17 open reading frame 47##BC022189|C17orf47|284083|chromosome 17 open reading frame 47##NM_001038704|C17orf47|284083|chromosome 17 open reading frame 47##AK301914|SEPT4|5414|septin 4##AK302146|SEPT4|5414|septin 4##NM_001198713|SEPT4|5414|septin 4##BC018056|SEPT4|5414|septin 4##U88870|SEPT4|5414|septin 4##AK295527|SEPT4|5414|septin 4##AK315396|SEPT4|5414|septin 4##AF176379|SEPT4|5414|septin 4##AK308957|SEPT4|5414|septin 4##NM_080415|SEPT4|5414|septin 4##NM_080416|SEPT4|5414|septin 4##AK308299|TEX14|56155|testis expressed 14##BC040526|TEX14|56155|testis expressed 14##AK125896|TEX14|56155|testis expressed 14##BC045647|TEX14|56155|testis expressed 14##AL834143|TEX14|56155|testis expressed 14##NM_001201457|TEX14|56155|testis expressed 14##NM_031272|TEX14|56155|testis expressed 14##NM_198393|TEX14|56155|testis expressed 14##BC107753|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	0.39404	CTCF.p2:-3:0.394
chr7	17686380	17686503	reg1014425.p2	8.674	+	TSC_hg19_v1_chr7_+_17382906 BC021696	-303535	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	-348172	+	AY359065 BC058284 NM_176813	-764837	-	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	293608	-	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	293686	-	BC062797 BC005309 M57423 NM_175886	381024	-	BC021696|AHR|196|aryl hydrocarbon receptor##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13##AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1	0.314804	CTCF.p2:6:0.315
chrX	133388123	133388235	reg1014585.p1	8.674	+	NM_001101357	-17103	+	TSC_hg19_v1_chrX_-_133119645 L47125 AK300168 NM_001164617 NM_001164618 NM_001164619 NM_004484	-268528	-	AB527294 CU690242 DQ349136 DQ349137 DQ349138 DQ893658 DQ895822 TSC_hg19_v1_chrX_-_133119622 Z37987 L47176 AK222761 AK222766 AK310689 BC035972 U50410	-268630	-	TSC_hg19_v1_chrX_+_133507317 AY157622 NM_001015877 NM_032335 NM_032458 AL832725 AK290095 AK303369 BC005994 AB058726	119198	+	TSC_hg19_v1_chrX_+_133594194 NM_000194 AK313435	206018	+	TSC_hg19_v1_chrX_+_133594225 M31642	206077	+	NM_001101357|CCDC160|347475|coiled-coil domain containing 160##L47125|GPC3|2719|glypican 3##AK300168|GPC3|2719|glypican 3##NM_001164617|GPC3|2719|glypican 3##NM_001164618|GPC3|2719|glypican 3##NM_001164619|GPC3|2719|glypican 3##NM_004484|GPC3|2719|glypican 3##DQ349136|GPC3|2719|glypican 3##DQ349137|GPC3|2719|glypican 3##DQ349138|GPC3|2719|glypican 3##DQ893658|GPC3|2719|glypican 3##DQ895822|GPC3|2719|glypican 3##Z37987|GPC3|2719|glypican 3##L47176|GPC3|2719|glypican 3##AK222761|GPC3|2719|glypican 3##AK222766|GPC3|2719|glypican 3##AK310689|GPC3|2719|glypican 3##BC035972|GPC3|2719|glypican 3##U50410|GPC3|2719|glypican 3##AY157622|PHF6|84295|PHD finger protein 6##NM_001015877|PHF6|84295|PHD finger protein 6##NM_032335|PHF6|84295|PHD finger protein 6##NM_032458|PHF6|84295|PHD finger protein 6##AL832725|PHF6|84295|PHD finger protein 6##AK290095|PHF6|84295|PHD finger protein 6##AK303369|PHF6|84295|PHD finger protein 6##BC005994|PHF6|84295|PHD finger protein 6##AB058726|PHF6|84295|PHD finger protein 6##NM_000194|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##AK313435|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##M31642|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1	0.99995	CTCF.p2:-10:1.000
chr10	90324985	90325140	reg1014187.p1	8.673	+	TSC_hg19_v1_chr10_+_89623420 U96180	-701635	+	TSC_hg19_v1_chr10_+_89623380 BC005821	-701673	+	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	-701836	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	17952	-	BC042900 BC031219 NM_001010939	21451	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	99118	+	U96180|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric	0.766374	CTCF.p2:-27:0.766
chr1	53166669	53166797	reg1016085.p1	8.673	+	TSC_hg19_v1_chr1_-_53164026 BC005992 AK022501 NM_023077	-2703	-	TSC_hg19_v1_chr1_-_53164020 AK225087	-2716	-	TSC_hg19_v1_chr1_-_53164009 BC015313 AK225041	-2735	-	TSC_hg19_v1_chr1_+_53192124 AK296460 NM_024646 AB051517	25385	+	TSC_hg19_v1_chr1_-_53238345 D28429	71610	-	AY271826 NM_001004339	141449	+	BC005992|SELRC1|65260|Sel1 repeat containing 1##AK022501|SELRC1|65260|Sel1 repeat containing 1##NM_023077|SELRC1|65260|Sel1 repeat containing 1##AK225087|SELRC1|65260|Sel1 repeat containing 1##BC015313|SELRC1|65260|Sel1 repeat containing 1##AK225041|SELRC1|65260|Sel1 repeat containing 1##AK296460|ZYG11B|79699|zyg-11 homolog B (C. elegans)##NM_024646|ZYG11B|79699|zyg-11 homolog B (C. elegans)##AB051517|ZYG11B|79699|zyg-11 homolog B (C. elegans)##AY271826|ZYG11A|440590|zyg-11 homolog A (C. elegans)##NM_001004339|ZYG11A|440590|zyg-11 homolog A (C. elegans)	0.239709	CTCF.p2:8:0.240
chr15	34027991	34028089	reg1013460.p1	8.673	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	-424871	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-667805	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-1016874	-	TSC_hg19_v1_chr15_-_34212524 BC037796	184518	-	AK095198 NM_012125	233048	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	303272	-	AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor	0.067094	
chr2	109213892	109214032	reg1015298.p2	8.673	+	TSC_hg19_v1_chr2_+_109204921 BC005341 NM_001193488	-8993	+	TSC_hg19_v1_chr2_+_109204792 AF527763	-9177	+	TSC_hg19_v1_chr2_+_109204761 NM_004987 U09284	-9206	+	TSC_hg19_v1_chr2_+_109223602 AF527762 NM_001193482	9655	+	TSC_hg19_v1_chr2_+_109237706 AK304260 NM_001193484 AF527760 AK310547	23741	+	AF527759 NM_001193485	57305	+	BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1##U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527762|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193482|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK304260|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193484|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527760|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK310547|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1	0.359202	CTCF.p2:-20:0.359
chr2	112806980	112807087	reg1007499.p3	8.673	+	TSC_hg19_v1_chr2_+_112656224 BC114917 BC114918	-150813	+	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	-150848	+	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	-165272	-	NM_032824 AK027587 TSC_hg19_v1_chr2_+_112812871	5808	+	TSC_hg19_v1_chr2_+_112812903 BC115373	5914	+	TSC_hg19_v1_chr2_+_112813153 AK290294 AY429534 AY429535	6154	+	BC114917|MERTK|10461|c-mer proto-oncogene tyrosine kinase##BC114918|MERTK|10461|c-mer proto-oncogene tyrosine kinase##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##NM_032824|TMEM87B|84910|transmembrane protein 87B##AK027587|TMEM87B|84910|transmembrane protein 87B##BC115373|TMEM87B|84910|transmembrane protein 87B##AK290294|TMEM87B|84910|transmembrane protein 87B##AY429534|TMEM87B|84910|transmembrane protein 87B##AY429535|TMEM87B|84910|transmembrane protein 87B	0.830068	CTCF.p2:-16:0.830
chr6	121627265	121627371	reg1016239.p1	8.673	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-1956397	-	BX538186 AK091682 AX747126 NM_001100411	-2156972	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-2227410	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	28325	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	129507	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	1093377	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.554691	CTCF.p2:10:0.555
chr6	35262242	35262371	reg1015377.p1	8.673	+	TSC_hg19_v1_chr6_+_35227490 AK294605 BC002549 NM_003427 BC000133 M91592	-34779	+	TSC_hg19_v1_chr6_+_35227309 AK310877	-35000	+	TSC_hg19_v1_chr6_+_35227286 AK295276 AK302903	-35045	+	AK093613 AY241694 NM_022047 TSC_hg19_v1_chr6_+_35265594 AK314756 BC017504 AB527549 AJ276095	3308	+	TSC_hg19_v1_chr6_+_35265672 BC007702	3361	+	TSC_hg19_v1_chr6_+_35310334 NM_001171818 NM_001171819 NM_001171820 NM_006238 NM_177435	48020	+	AK294605|ZNF76|7629|zinc finger protein 76##BC002549|ZNF76|7629|zinc finger protein 76##NM_003427|ZNF76|7629|zinc finger protein 76##BC000133|ZNF76|7629|zinc finger protein 76##M91592|ZNF76|7629|zinc finger protein 76##AK310877|ZNF76|7629|zinc finger protein 76##AK295276|ZNF76|7629|zinc finger protein 76##AK302903|ZNF76|7629|zinc finger protein 76##AK093613|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AY241694|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##NM_022047|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AK314756|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##BC017504|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AJ276095|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##BC007702|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##NM_001171818|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_001171819|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_001171820|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_006238|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_177435|PPARD|5467|peroxisome proliferator-activated receptor delta	0.635311	CTCF.p2:-5:0.635
chr2	33899138	33899298	reg1015531.p1	8.672	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-74873	-	AB020653 NM_015376	-160277	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-197522	+	TSC_hg19_v1_chr2_+_36582920 AY358371	2683744	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	2684184	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	2926064	-	BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	0.953173	CTCF.p2:-18:0.953
chr7	1126645	1126808	reg1016469.p1	8.672	+	NM_001039966 NM_001505 AF015257	-250	+	BC014241 NM_138445 AB464540 DQ892659 DQ895899	-29582	+	TSC_hg19_v1_chr7_-_1067984 L07392 BC025971	-58769	-	NM_001098201 AK289588 U63917 BC067849	1027	+	TSC_hg19_v1_chr7_-_1177884 AF495721 BC006224 NM_001134395 NM_001134396 NM_032350	51136	-	BC016963 TSC_hg19_v1_chr7_-_1199799 AK027118 BC029558	73072	-	NM_001039966|GPER|2852|G protein-coupled estrogen receptor 1##NM_001505|GPER|2852|G protein-coupled estrogen receptor 1##AF015257|GPER|2852|G protein-coupled estrogen receptor 1##BC014241|GPR146|115330|G protein-coupled receptor 146##NM_138445|GPR146|115330|G protein-coupled receptor 146##DQ892659|GPR146|115330|G protein-coupled receptor 146##DQ895899|GPR146|115330|G protein-coupled receptor 146##BC025971|C7orf50|84310|chromosome 7 open reading frame 50##NM_001098201|GPER|2852|G protein-coupled estrogen receptor 1##AK289588|GPER|2852|G protein-coupled estrogen receptor 1##U63917|GPER|2852|G protein-coupled estrogen receptor 1##BC067849|GPER|2852|G protein-coupled estrogen receptor 1##AF495721|C7orf50|84310|chromosome 7 open reading frame 50##BC006224|C7orf50|84310|chromosome 7 open reading frame 50##NM_001134395|C7orf50|84310|chromosome 7 open reading frame 50##NM_001134396|C7orf50|84310|chromosome 7 open reading frame 50##NM_032350|C7orf50|84310|chromosome 7 open reading frame 50##BC016963|ZFAND2A|90637|zinc finger, AN1-type domain 2A##AK027118|ZFAND2A|90637|zinc finger, AN1-type domain 2A##BC029558|ZFAND2A|90637|zinc finger, AN1-type domain 2A	1.012168	CTCF.p2:-8:0.999
chr2	73439719	73439846	reg1016064.p1	8.671	+	AK295936 NM_001134462 AK316410	-10375	+	TSC_hg19_v1_chr2_-_73340101 AF334812 AB020664 NM_015470	-99673	-	TSC_hg19_v1_chr2_-_73340066 BC035013	-99718	-	TSC_hg19_v1_chr2_+_73441372 NM_006062 AK300779 AK301809 BC073806 AB527925 U50383	1623	+	TSC_hg19_v1_chr2_-_73460365 AY358605 BC005069 NM_032319 AK312077	20582	-	NM_001009570 NM_001166284 NM_001166285 NM_006429 BC088351 TSC_hg19_v1_chr2_+_73461435 AK291961 AK293597 AK297846 AK298153 AK302078	21617	+	AK295936|NOTO|344022|notochord homeobox##NM_001134462|NOTO|344022|notochord homeobox##AK316410|NOTO|344022|notochord homeobox##AF334812|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##AB020664|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##NM_015470|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##BC035013|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##NM_006062|SMYD5|10322|SMYD family member 5##AK300779|SMYD5|10322|SMYD family member 5##AK301809|SMYD5|10322|SMYD family member 5##BC073806|SMYD5|10322|SMYD family member 5##U50383|SMYD5|10322|SMYD family member 5##AY358605|PRADC1|84279|protease-associated domain containing 1##BC005069|PRADC1|84279|protease-associated domain containing 1##NM_032319|PRADC1|84279|protease-associated domain containing 1##AK312077|PRADC1|84279|protease-associated domain containing 1##NM_001009570|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##NM_001166284|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##NM_001166285|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##NM_006429|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##BC088351|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK291961|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK293597|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK297846|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK298153|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK302078|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)	0.997467	CTCF.p2:19:0.997
chr8	76169626	76169761	reg1017399.p1	8.671	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-272784	+	CR749657 NM_015886	-432922	+	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	-907003	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	150495	+	BX571750 NM_004133 EU832451 HQ692842	282521	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	1423817	+	NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15##AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4	0.983632	CTCF.p2:5:0.984
chr15	62546687	62546806	reg1015999.p1	8.670	+	NM_001007595	-89265	-	NM_207322 AF504646	-187558	+	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	-194132	-	TSC_hg19_v1_chr15_+_62682748 AB621808	135972	+	AF402000 NM_015059	392763	+	TSC_hg19_v1_chr15_+_63050761 BX648144 BX648146	504028	+	NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B##NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB621808|TLN2|83660|talin 2##AF402000|TLN2|83660|talin 2##NM_015059|TLN2|83660|talin 2##BX648144|TLN2|83660|talin 2##BX648146|TLN2|83660|talin 2	0.988298	CTCF.p2:-4:0.988
chr17	73234876	73234983	reg1013279.p2	8.670	+	TSC_hg19_v1_chr17_+_73201801 AK302426 AF514995 BC000697 AK297574 AK295694 AK022611 AK298519 AL833893 CU674344 AF498261	-33125	+	TSC_hg19_v1_chr17_+_73201533 NM_024844	-33367	+	TSC_hg19_v1_chr17_-_73179099 NM_001005849 NM_006937	-55821	-	TSC_hg19_v1_chr17_-_73257685 AK302423 AK304692 AK291685 AK296843 AF190864 D63876 AF219138 AF219139 AL833603 BC070044	22740	-	TSC_hg19_v1_chr17_-_73257688 AK293291 BC051732	22764	-	BC063285 TSC_hg19_v1_chr17_-_73257705 AK291651 NM_014001 NM_138619	22786	-	AK302426|NUP85|79902|nucleoporin 85kDa##AF514995|NUP85|79902|nucleoporin 85kDa##BC000697|NUP85|79902|nucleoporin 85kDa##AK297574|NUP85|79902|nucleoporin 85kDa##AK295694|NUP85|79902|nucleoporin 85kDa##AK022611|NUP85|79902|nucleoporin 85kDa##AK298519|NUP85|79902|nucleoporin 85kDa##AL833893|NUP85|79902|nucleoporin 85kDa##AF498261|NUP85|79902|nucleoporin 85kDa##NM_024844|NUP85|79902|nucleoporin 85kDa##NM_001005849|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##NM_006937|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##AK302423|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK304692|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK291685|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK296843|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AF190864|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##D63876|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AF219138|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AF219139|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AL833603|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##BC070044|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK293291|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##BC051732|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##BC063285|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK291651|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##NM_014001|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##NM_138619|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	1.029251	CTCF.p2:-5:1.000
chr2	231714899	231715010	reg1014230.p2	8.670	+	AK292382 NM_001130849 NM_001130850 AK315692	-136676	+	TSC_hg19_v1_chr2_+_231577633 BC020570	-137310	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	-137408	+	TSC_hg19_v1_chr2_+_231729608 NM_001012514 NM_001012516 NM_030926	14606	+	TSC_hg19_v1_chr2_+_231729626 AF271781 AF272043	14675	+	TSC_hg19_v1_chr2_+_231729653 AK075361 AK090975 AK303199 AX746713	14691	+	AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##NM_016289|CAB39|51719|calcium binding protein 39##NM_001012514|ITM2C|81618|integral membrane protein 2C##NM_001012516|ITM2C|81618|integral membrane protein 2C##NM_030926|ITM2C|81618|integral membrane protein 2C##AF271781|ITM2C|81618|integral membrane protein 2C##AF272043|ITM2C|81618|integral membrane protein 2C##AK075361|ITM2C|81618|integral membrane protein 2C##AK090975|ITM2C|81618|integral membrane protein 2C##AK303199|ITM2C|81618|integral membrane protein 2C	0.981174	CTCF.p2:-1:0.981
chr2	90451355	90451461	reg1013250.p1	8.669	+	TSC_hg19_v1_chr2_+_90211706 Z69013	-239690	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-373654	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-831555	-	TSC_hg19_v1_chr2_-_91847997 BC030764	1396595	-	AK097438 BC021716 NM_144705 AK296678 CU692394	5085842	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	5240074	+	BC070334|IGKC|3514|immunoglobulin kappa constant##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein	0.829185	CTCF.p2:-5:0.829
chr3	107293632	107293757	reg1014082.p1	8.669	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-51845	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-197384	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-334102	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	516179	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	647598	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	721707	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.147447	
chr5	9898569	9898697	reg1017966.p1	8.669	+	BC095521 NM_019599	-268171	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	-352439	-	TSC_hg19_v1_chr5_+_7869306 BC062577	-2029323	+	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	351351	-	AK300042 TSC_hg19_v1_chr5_-_10250001 AK316317 AK055604 AK302012 NM_199133	351372	-	NM_012073 AK302368 TSC_hg19_v1_chr5_+_10250368	351692	+	BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC063406|FAM173B|134145|family with sequence similarity 173, member B##AK300042|FAM173B|134145|family with sequence similarity 173, member B##AK316317|FAM173B|134145|family with sequence similarity 173, member B##AK055604|FAM173B|134145|family with sequence similarity 173, member B##AK302012|FAM173B|134145|family with sequence similarity 173, member B##NM_199133|FAM173B|134145|family with sequence similarity 173, member B##NM_012073|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK302368|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)	0.975211	CTCF.p2:2:0.975
chr15	39110031	39110157	reg1012150.p1	8.668	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-121296	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-253163	-	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-363749	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	432831	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	763235	+	AK093308 AX748045 BC045191 NM_152597	964934	-	AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.996693	CTCF.p2:-8:0.997
chr18	52226354	52226469	reg1013360.p1	8.668	+	BX640877 NM_173529	-341241	+	AB528241 AF480305 NM_139171	-345469	-	NM_007195 TSC_hg19_v1_chr18_+_51795943 AK301578 AF140501 BC032617 BC032662 AL136670 AF245438 AK093688 AB463184 AM392978 DQ890893 DQ896811 CU689468	-430471	+	AK096425 NM_173629	31978	+	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	269327	+	AK058097 NM_001143829	398867	-	BX640877|C18orf54|162681|chromosome 18 open reading frame 54##NM_173529|C18orf54|162681|chromosome 18 open reading frame 54##AF480305|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_139171|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_007195|POLI|11201|polymerase (DNA directed) iota##AK301578|POLI|11201|polymerase (DNA directed) iota##AF140501|POLI|11201|polymerase (DNA directed) iota##BC032617|POLI|11201|polymerase (DNA directed) iota##BC032662|POLI|11201|polymerase (DNA directed) iota##AL136670|POLI|11201|polymerase (DNA directed) iota##AF245438|POLI|11201|polymerase (DNA directed) iota##AK093688|POLI|11201|polymerase (DNA directed) iota##AM392978|POLI|11201|polymerase (DNA directed) iota##DQ890893|POLI|11201|polymerase (DNA directed) iota##DQ896811|POLI|11201|polymerase (DNA directed) iota##AK096425|C18orf26|284254|chromosome 18 open reading frame 26##NM_173629|C18orf26|284254|chromosome 18 open reading frame 26##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family##AK058097|CCDC68|80323|coiled-coil domain containing 68##NM_001143829|CCDC68|80323|coiled-coil domain containing 68	0.051154	
chr5	42889537	42889662	reg1016988.p1	8.668	+	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	-77608	-	AK303469 NM_001134848 AK127368 BC015985 BC039102 TSC_hg19_v1_chr5_+_42756958	-132661	+	BC136496 NM_001242460 NM_001242461 NM_001242462	-323635	+	TSC_hg19_v1_chr5_-_42993436 AK056817	103847	-	AB463523 BC067873 AY032883 NM_001014279	150697	-	AK307963 TSC_hg19_v1_chr5_+_43121018 BC045109	231402	+	Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK303469|CCDC152|100129792|coiled-coil domain containing 152##NM_001134848|CCDC152|100129792|coiled-coil domain containing 152##AK127368|CCDC152|100129792|coiled-coil domain containing 152##BC015985|CCDC152|100129792|coiled-coil domain containing 152##BC039102|CCDC152|100129792|coiled-coil domain containing 152##BC136496|GHR|2690|growth hormone receptor##NM_001242460|GHR|2690|growth hormone receptor##NM_001242461|GHR|2690|growth hormone receptor##NM_001242462|GHR|2690|growth hormone receptor##AK056817|FLJ32255|643977|uncharacterized LOC643977##BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39##AK307963|ZNF131|7690|zinc finger protein 131	0.723505	CTCF.p2:19:0.724
chr17	25676216	25676342	reg1013972.p2	8.667	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-54998	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-55157	+	NM_001190452	-3653843	+	BC035488 BC042106 NM_014238	122750	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	281889	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	281924	+	AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.117713	
chr12	54400089	54400269	reg1000253.p2	8.666	+	NM_006897 BC053894 AK315194 AK000445 AB464582 CU691056 BC032769	-6254	+	AK313759 NM_017409 BC001293 AB464578 AF255675 BT009921	-21193	+	NM_014212 AK291946 BC001543 AJ000041 CU674756	-33212	+	TSC_hg19_v1_chr12_+_54402796 BC053898 NM_022658 AK290959	2667	+	NM_014620 NM_153693 TSC_hg19_v1_chr12_+_54410671 X07495	10498	+	BC034922 BC044635 M16938 TSC_hg19_v1_chr12_+_54410917 AK314829	10745	+	NM_006897|HOXC9|3225|homeobox C9##BC053894|HOXC9|3225|homeobox C9##AK315194|HOXC9|3225|homeobox C9##AK000445|HOXC9|3225|homeobox C9##BC032769|HOXC9|3225|homeobox C9##AK313759|HOXC10|3226|homeobox C10##NM_017409|HOXC10|3226|homeobox C10##BC001293|HOXC10|3226|homeobox C10##AF255675|HOXC10|3226|homeobox C10##BT009921|HOXC10|3226|homeobox C10##NM_014212|HOXC11|3227|homeobox C11##AK291946|HOXC11|3227|homeobox C11##BC001543|HOXC11|3227|homeobox C11##AJ000041|HOXC11|3227|homeobox C11##BC053898|HOXC8|3224|homeobox C8##NM_022658|HOXC8|3224|homeobox C8##AK290959|HOXC8|3224|homeobox C8##NM_014620|HOXC4|3221|homeobox C4##NM_153693|HOXC6|3223|homeobox C6##X07495|HOXC4|3221|homeobox C4##BC034922|HOXC5|3222|homeobox C5##BC044635|HOXC5|3222|homeobox C5##M16938|HOXC6|3223|homeobox C6##AK314829|HOXC6|3223|homeobox C6	0.0	
chr12	57506264	57506330	reg1013080.p1	8.666	+	TSC_hg19_v1_chr12_-_57505177 NM_001178078 NM_001178080 NM_001178081 NM_003153	-1100	-	TSC_hg19_v1_chr12_-_57505144 AK290431 AK299094 AK316142 BC004973 BC005823	-1152	-	TSC_hg19_v1_chr12_-_57505013 AK316236 BC075852 AK298721 AK312471 U16031	-1292	-	TSC_hg19_v1_chr12_+_57522265 BC052593 BC072015 NM_002332 X13916	15985	+	TSC_hg19_v1_chr12_+_57522452 BC045107	16166	+	AY358614 NM_007224 TSC_hg19_v1_chr12_+_57610601 BC036679 AK094231 AK290949 BC053581 CU690992	104367	+	NM_001178078|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178080|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178081|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_003153|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK290431|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK299094|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK316142|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC004973|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC005823|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK316236|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC075852|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK298721|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK312471|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##U16031|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC052593|LRP1|4035|low density lipoprotein receptor-related protein 1##BC072015|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_002332|LRP1|4035|low density lipoprotein receptor-related protein 1##X13916|LRP1|4035|low density lipoprotein receptor-related protein 1##BC045107|LRP1|4035|low density lipoprotein receptor-related protein 1##AY358614|NXPH4|11247|neurexophilin 4##NM_007224|NXPH4|11247|neurexophilin 4##BC036679|NXPH4|11247|neurexophilin 4##AK094231|NXPH4|11247|neurexophilin 4##AK290949|NXPH4|11247|neurexophilin 4##BC053581|NXPH4|11247|neurexophilin 4	0.969023	CTCF.p2:-13:0.969
chr4	11101738	11101919	reg1015930.p2	8.666	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-415427	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-642818	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-983292	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	328704	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2384123	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2384147	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr6	52463171	52463291	reg1014305.p2	8.666	+	AK095117 TSC_hg19_v1_chr6_+_52442225	-21057	+	TSC_hg19_v1_chr6_-_52441859 AK291751 AB621814 BC028121 NM_012288	-21380	-	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	-21473	-	TSC_hg19_v1_chr6_+_52529228 AK091117	65997	+	TSC_hg19_v1_chr6_+_52535913 NM_014051 AF239771 AK312063 BC015097 BC019328	72692	+	AK292602 AK313601 M16594 BC002895 NM_000846	165085	-	AK095117|FLJ37798|401264|uncharacterized LOC401264##AK291751|TRAM2|9697|translocation associated membrane protein 2##BC028121|TRAM2|9697|translocation associated membrane protein 2##NM_012288|TRAM2|9697|translocation associated membrane protein 2##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2##AK091117|LOC730101|730101|uncharacterized LOC730101##NM_014051|TMEM14A|28978|transmembrane protein 14A##AF239771|TMEM14A|28978|transmembrane protein 14A##AK312063|TMEM14A|28978|transmembrane protein 14A##BC015097|TMEM14A|28978|transmembrane protein 14A##BC019328|TMEM14A|28978|transmembrane protein 14A##AK292602|GSTA2|2939|glutathione S-transferase alpha 2##AK313601|GSTA2|2939|glutathione S-transferase alpha 2##M16594|GSTA2|2939|glutathione S-transferase alpha 2##BC002895|GSTA2|2939|glutathione S-transferase alpha 2##NM_000846|GSTA2|2939|glutathione S-transferase alpha 2	0.930087	CTCF.p2:0:0.930
chr2	113716495	113716649	reg1015808.p1	8.665	+	AF201832 NM_173205	-43803	+	AF167368 AF200496 NM_014439 NM_173202 NM_173203 NM_173204 BC020637 AB451333 AB451478 AB590279 AF251119 AF251120 AY071840 AY071841 CU676594 DQ891388	-46004	+	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	-122228	-	AY359111 AF200492 NM_019618 AF206696	19029	+	AF201831 BC107042 BC107043 NM_014440 AB590979	46926	+	NM_014438 NM_173178 AF200494 AF201833	93869	-	AF201832|IL37|27178|interleukin 37##NM_173205|IL37|27178|interleukin 37##AF167368|IL37|27178|interleukin 37##AF200496|IL37|27178|interleukin 37##NM_014439|IL37|27178|interleukin 37##NM_173202|IL37|27178|interleukin 37##NM_173203|IL37|27178|interleukin 37##NM_173204|IL37|27178|interleukin 37##BC020637|IL37|27178|interleukin 37##AB451333|IL37|27178|interleukin 37##AB451478|IL37|27178|interleukin 37##AF251119|IL37|27178|interleukin 37##AF251120|IL37|27178|interleukin 37##AY071840|IL37|27178|interleukin 37##AY071841|IL37|27178|interleukin 37##DQ891388|IL37|27178|interleukin 37##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta##AY359111|IL36G|56300|interleukin 36, gamma##AF200492|IL36G|56300|interleukin 36, gamma##NM_019618|IL36G|56300|interleukin 36, gamma##AF206696|IL36G|56300|interleukin 36, gamma##AF201831|IL36A|27179|interleukin 36, alpha##BC107042|IL36A|27179|interleukin 36, alpha##BC107043|IL36A|27179|interleukin 36, alpha##NM_014440|IL36A|27179|interleukin 36, alpha##NM_014438|IL36B|27177|interleukin 36, beta##NM_173178|IL36B|27177|interleukin 36, beta##AF200494|IL36B|27177|interleukin 36, beta##AF201833|IL36B|27177|interleukin 36, beta	0.998215	CTCF.p2:17:0.998
chr15	70759393	70759498	reg1014555.p2	8.664	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-369202	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-369218	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-417536	-	TSC_hg19_v1_chr15_-_70878946 BC040579	119499	-	BC016881 AL834243 NM_001008224 AK055435	235182	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	296397	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.99639	CTCF.p2:6:0.996
chr1	83774832	83774996	reg1016148.p1	8.664	+	AF104266 AF104938 AF104939 NM_012302	-1508833	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	-2002987	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-4302487	-	AK097722 TSC_hg19_v1_chr1_-_84326308	551354	-	TSC_hg19_v1_chr1_-_84326677 BC036594	551762	-	AK126792 BC048970 BC032829 TSC_hg19_v1_chr1_-_84464848 BC060878 BC028350 NM_024686	689882	-	AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	0.479977	CTCF.p2:-23:0.480
chr3	63335407	63335524	reg1014745.p2	8.664	+	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	-71548	+	AF458662 AB593079 TSC_hg19_v1_chr3_-_62861056 AB032947 NM_003716 NM_183393 NM_183394	-474421	-	TSC_hg19_v1_chr3_-_62860565 AB587314	-474833	-	NM_144642 AK315958 AK312465	93334	+	NM_001080537 AK126350	302893	+	TSC_hg19_v1_chr3_-_63849482 CU688000 CR457373 BC065012 AK225110	514007	-	NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin##AF458662|CADPS|8618|Ca++-dependent secretion activator##AB593079|CADPS|8618|Ca++-dependent secretion activator##AB032947|CADPS|8618|Ca++-dependent secretion activator##NM_003716|CADPS|8618|Ca++-dependent secretion activator##NM_183393|CADPS|8618|Ca++-dependent secretion activator##NM_183394|CADPS|8618|Ca++-dependent secretion activator##NM_144642|SYNPR|132204|synaptoporin##AK315958|SYNPR|132204|synaptoporin##AK312465|SYNPR|132204|synaptoporin##NM_001080537|SNTN|132203|sentan, cilia apical structure protein##AK126350|SNTN|132203|sentan, cilia apical structure protein##CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)##BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)##AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)	0.975358	CTCF.p2:-7:0.975
chr5	140892014	140892152	reg1013667.p1	8.664	+	TSC_hg19_v1_chr5_+_140868721 BC112081 BC112083 AF152339 AF152526 NM_018929 NM_032407	-23319	+	TSC_hg19_v1_chr5_+_140864626 BC042650 AF152338 AF152525 BC101035 BC101037 BC101038 NM_018928 NM_032406 BC101036	-27399	+	TSC_hg19_v1_chr5_+_140855606 AF152337 AF152524 CU675407 CU676422 CU693162 DQ893469 DQ896354	-36440	+	AL050086 TSC_hg19_v1_chr5_-_140895550	3399	-	AF051782 AY363395 AB384958 DQ067453 TSC_hg19_v1_chr5_-_140998497 BC117257 BC143413 BC143414	106415	-	TSC_hg19_v1_chr5_-_140998562 AB209482	106478	-	BC112081|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC112083|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152339|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152526|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_018929|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_032407|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152337|PCDHGC3|5098|protocadherin gamma subfamily C, 3##AF152524|PCDHGC3|5098|protocadherin gamma subfamily C, 3##DQ893469|PCDHGC3|5098|protocadherin gamma subfamily C, 3##DQ896354|PCDHGC3|5098|protocadherin gamma subfamily C, 3##AL050086|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AF051782|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AY363395|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##DQ067453|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC117257|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143413|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143414|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AB209482|DIAPH1|1729|diaphanous homolog 1 (Drosophila)	1.050451	CTCF.p2:-7:0.999
chr12	70983889	70984003	reg1014938.p2	8.663	+	TSC_hg19_v1_chr12_+_70861858 BC031864	-122078	+	TSC_hg19_v1_chr12_+_70760230 NM_014505 AF160967 BC042446 BC050621 AF215891 AF207992	-223680	+	AK307479 NM_001199303 AK095789	-346435	+	BC101679 BC113463 BC143356 BC143360 NM_001206971 NM_001206972 NM_002837 X54131	19676	-	AB587339 TSC_hg19_v1_chr12_-_71031179 AK128562 BC051329 BX647238 CR749546 BX648245 AK126121 NM_001109754	47250	-	BC119777 BC122866 BC110900 TSC_hg19_v1_chr12_-_71148231	164203	-	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AK307479|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##NM_001199303|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK095789|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206971|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206972|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##AK128562|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC051329|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX647238|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##CR749546|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX648245|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##AK126121|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001109754|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	0.993031	CTCF.p2:-7:0.993
chr2	18331056	18331197	reg1017659.p1	8.663	+	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	-271172	+	NM_001105569	-333341	+	TSC_hg19_v1_chr2_+_17935407 CR936783 NM_001130009 AK093631 AX748233	-395715	+	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	410790	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	439684	-	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	1227253	-	AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_001105569|MSGN1|343930|mesogenin 1##CR936783|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##NM_001130009|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK093631|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)	0.96531	CTCF.p2:1:0.965
chr7	2139979	2140105	reg1015053.p1	8.663	+	TSC_hg19_v1_chr7_-_1980177 BC018870	-159879	-	NM_001128636	-391245	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-530221	+	AK310481 TSC_hg19_v1_chr7_-_2272542	132493	-	TSC_hg19_v1_chr7_-_2272559 AF083811	132518	-	TSC_hg19_v1_chr7_-_2272581 AK090959 AK310831 AK314227 AX746704 NM_001013836 NM_001013837 NM_003550	132538	-	BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AF083811|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK090959|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310831|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK314227|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013836|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013837|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_003550|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.338903	CTCF.p2:7:0.339
chr9	96328759	96328888	reg1015869.p1	8.663	+	BC007879 TSC_hg19_v1_chr9_+_96233575	-95326	+	AK056096 NM_198841	-112950	-	TSC_hg19_v1_chr9_+_96214001 BC075701 BC098584 AF214737 AF214738 NM_014612 BC111736 D80005	-114643	+	TSC_hg19_v1_chr9_+_96339042 NM_005392 BC064613 AB014562 BC152437 AL834263	10100	+	TSC_hg19_v1_chr9_-_96717589 AF213356 NM_021570	388759	-	TSC_hg19_v1_chr9_-_96717638 BC064363	388816	-	BC007879|FAM120A|23196|family with sequence similarity 120A##AK056096|FAM120AOS|158293|family with sequence similarity 120A opposite strand##NM_198841|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC075701|FAM120A|23196|family with sequence similarity 120A##BC098584|FAM120A|23196|family with sequence similarity 120A##AF214737|FAM120A|23196|family with sequence similarity 120A##AF214738|FAM120A|23196|family with sequence similarity 120A##NM_014612|FAM120A|23196|family with sequence similarity 120A##BC111736|FAM120A|23196|family with sequence similarity 120A##D80005|FAM120A|23196|family with sequence similarity 120A##NM_005392|PHF2|5253|PHD finger protein 2##BC064613|PHF2|5253|PHD finger protein 2##AB014562|PHF2|5253|PHD finger protein 2##BC152437|PHF2|5253|PHD finger protein 2##AL834263|PHF2|5253|PHD finger protein 2##AF213356|BARX1|56033|BARX homeobox 1##NM_021570|BARX1|56033|BARX homeobox 1##BC064363|BARX1|56033|BARX homeobox 1	0.975791	CTCF.p2:-7:0.976
chr10	28530828	28530974	reg1018983.p1	8.662	+	AK292521 TSC_hg19_v1_chr10_-_28287879 AK001679 NM_018076 BC085611	-243017	-	BC036207 TSC_hg19_v1_chr10_-_28034752 AK125339 NM_001242702 NM_173576	-496140	-	TSC_hg19_v1_chr10_+_27793232 AY574034 AK295443 AK297629 AK299457 BC029350 AF087860 BC015014 NM_021252 AL136734 AK223153 AB464117 AF137372 AF498950 AK001555 AM393142 BT009840 CR533455 CU677165	-737672	+	BC038105 AK057360 NM_173496	40139	-	TSC_hg19_v1_chr10_-_28591994 AK315046 AK301592	61031	-	BC043365 TSC_hg19_v1_chr10_-_28821677	290694	-	AK292521|ARMC4|55130|armadillo repeat containing 4##AK001679|ARMC4|55130|armadillo repeat containing 4##NM_018076|ARMC4|55130|armadillo repeat containing 4##BC085611|ARMC4|55130|armadillo repeat containing 4##BC036207|MKX|283078|mohawk homeobox##AK125339|MKX|283078|mohawk homeobox##NM_001242702|MKX|283078|mohawk homeobox##NM_173576|MKX|283078|mohawk homeobox##AY574034|RAB18|22931|RAB18, member RAS oncogene family##AK295443|RAB18|22931|RAB18, member RAS oncogene family##AK297629|RAB18|22931|RAB18, member RAS oncogene family##AK299457|RAB18|22931|RAB18, member RAS oncogene family##BC029350|RAB18|22931|RAB18, member RAS oncogene family##AF087860|RAB18|22931|RAB18, member RAS oncogene family##BC015014|RAB18|22931|RAB18, member RAS oncogene family##NM_021252|RAB18|22931|RAB18, member RAS oncogene family##AL136734|RAB18|22931|RAB18, member RAS oncogene family##AK223153|RAB18|22931|RAB18, member RAS oncogene family##AF137372|RAB18|22931|RAB18, member RAS oncogene family##AF498950|RAB18|22931|RAB18, member RAS oncogene family##AK001555|RAB18|22931|RAB18, member RAS oncogene family##AM393142|RAB18|22931|RAB18, member RAS oncogene family##BT009840|RAB18|22931|RAB18, member RAS oncogene family##CR533455|RAB18|22931|RAB18, member RAS oncogene family##BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##BC043365|LOC220906|220906|uncharacterized LOC220906	0.548044	CTCF.p2:14:0.548
chr15	78203098	78203215	reg1011013.p2	8.662	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-278376	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-278457	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-489894	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	166797	-	NM_001101404	181770	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	220606	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.918263	CTCF.p2:15:0.897
chr18	35024822	35024918	reg1012623.p1	8.662	+	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-615750	-	TSC_hg19_v1_chr18_+_34409093 AK304230 AL832625 NM_020776 BC038772 AK292288 BX648875 BC045585 AB587550 AM393103 AM393380 BC146691	-615787	+	AB073382 TSC_hg19_v1_chr18_-_34408948	-615918	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	120826	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	121129	-	TSC_hg19_v1_chr18_-_36915657 D28405	1890786	-	BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK304230|KIAA1328|57536|KIAA1328##AL832625|KIAA1328|57536|KIAA1328##NM_020776|KIAA1328|57536|KIAA1328##AK292288|KIAA1328|57536|KIAA1328##BX648875|KIAA1328|57536|KIAA1328##BC045585|KIAA1328|57536|KIAA1328##AM393103|KIAA1328|57536|KIAA1328##AM393380|KIAA1328|57536|KIAA1328##BC146691|KIAA1328|57536|KIAA1328##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4	0.833429	CTCF.p2:-2:0.833
chr3	194980802	194980982	reg1015072.p2	8.662	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-573389	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-574269	+	NM_018385	-587687	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	10958	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	182810	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	289221	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.918897	CTCF.p2:50:0.919
chr4	57534578	57534696	reg1016555.p1	8.662	+	BC014225 AB059410 TSC_hg19_v1_chr4_-_57522645 AF492680 AF492681 NM_001145459 NM_139211	-12059	-	AB019573 AB463756 AM393649 DQ892193 EU176669 TSC_hg19_v1_chr4_-_57522247	-12480	-	AY439003 NM_206919	-163263	+	AF492675 NM_001145460 NM_032495 NM_139212	13221	-	CR542135 DQ895533 EU176199 TSC_hg19_v1_chr4_-_57687883 AK312222 NM_021114 X57655 BC022514 GU727622	153228	-	TSC_hg19_v1_chr4_+_57774035 NM_005612	239418	+	BC014225|HOPX|84525|HOP homeobox##AB059410|HOPX|84525|HOP homeobox##AF492680|HOPX|84525|HOP homeobox##AF492681|HOPX|84525|HOP homeobox##NM_001145459|HOPX|84525|HOP homeobox##NM_139211|HOPX|84525|HOP homeobox##AB019573|HOPX|84525|HOP homeobox##AM393649|HOPX|84525|HOP homeobox##DQ892193|HOPX|84525|HOP homeobox##EU176669|HOPX|84525|HOP homeobox##AY439003|ARL9|132946|ADP-ribosylation factor-like 9##NM_206919|ARL9|132946|ADP-ribosylation factor-like 9##AF492675|HOPX|84525|HOP homeobox##NM_001145460|HOPX|84525|HOP homeobox##NM_032495|HOPX|84525|HOP homeobox##NM_139212|HOPX|84525|HOP homeobox##CR542135|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##DQ895533|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##EU176199|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##AK312222|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##NM_021114|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##X57655|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##BC022514|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##GU727622|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##NM_005612|REST|5978|RE1-silencing transcription factor	0.093383	
chr15	38766482	38766594	reg1014334.p1	8.661	+	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-20193	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	-221516	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	-222143	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	90393	-	AK093014 AX747856 BC119016 BC119810 NM_207444	222260	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	776387	+	NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54	0.88565	CTCF.p2:-7:0.886
chr4	164676178	164676300	reg1007746.p1	8.661	+	AB463878 AK000675 AK301408 NM_017923	-141524	-	TSC_hg19_v1_chr4_+_164415868 BC011842	-260366	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-260397	+	NM_012403	442623	-	AK289711 NM_001166373	628167	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	1201863	+	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39	0.635359	CTCF.p2:4:0.622
chr4	185089691	185089822	reg1014991.p2	8.661	+	TSC_hg19_v1_chr4_+_184827885 AB384196	-261845	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-261936	+	TSC_hg19_v1_chr4_+_184826513 AB037813 BC146754 NM_020225	-263250	+	BC035035 AY358676 AK057370 NM_153343	49309	-	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	305925	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	480845	-	AK289840|STOX2|56977|storkhead box 2##AB037813|STOX2|56977|storkhead box 2##BC146754|STOX2|56977|storkhead box 2##NM_020225|STOX2|56977|storkhead box 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase	0.999623	CTCF.p2:-2:1.000
chr11	9634859	9634964	reg1012375.p1	8.660	+	AK122837 NM_001143976	-38678	+	TSC_hg19_v1_chr11_+_9595453 AB384747 EU832325 EU832410	-39444	+	BC051831 TSC_hg19_v1_chr11_+_9595437	-39478	+	TSC_hg19_v1_chr11_+_9685623 AK096859	50703	+	TSC_hg19_v1_chr11_+_9685627 NM_015055	50725	+	BC000616 TSC_hg19_v1_chr11_+_9685651 AF134894	50740	+	AK122837|WEE1|7465|WEE1 homolog (S. pombe)##NM_001143976|WEE1|7465|WEE1 homolog (S. pombe)##EU832325|WEE1|7465|WEE1 homolog (S. pombe)##EU832410|WEE1|7465|WEE1 homolog (S. pombe)##BC051831|WEE1|7465|WEE1 homolog (S. pombe)##AK096859|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##NM_015055|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000616|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF134894|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit	0.988202	CTCF.p2:-14:0.988
chr2	78578465	78578587	reg1015421.p1	8.660	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	-829108	-	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-2640475	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-2640807	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	674312	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	736607	-	AK307292 NM_002909 TSC_hg19_v1_chr2_+_79347583	769010	+	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta##AK307292|REG1A|5967|regenerating islet-derived 1 alpha##NM_002909|REG1A|5967|regenerating islet-derived 1 alpha	0.950138	CTCF.p2:0:0.950
chr4	21792200	21792365	reg1014967.p1	8.660	+	BX648990 DQ148490 NM_001035003	-92965	-	DQ148491 NM_001035004	-246004	-	AY118170 DQ148489 NM_147183 AK290998	-486713	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	158102	-	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	725272	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	902310	+	BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##DQ148491|KCNIP4|80333|Kv channel interacting protein 4##NM_001035004|KCNIP4|80333|Kv channel interacting protein 4##AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4##NM_147182|KCNIP4|80333|Kv channel interacting protein 4##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)	0.997871	CTCF.p2:-27:0.998
chr11	32345212	32345333	reg1016578.p1	8.659	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	-232573	+	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	-232795	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-505794	-	AK093168 BC032861 NM_001198551 NM_001198552	107088	-	TSC_hg19_v1_chr11_-_32456950 BC046461	111667	-	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	111797	-	BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1##BC046461|WT1|7490|Wilms tumor 1##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1	0.982399	CTCF.p2:-13:0.982
chr2	118543427	118543544	reg1015938.p1	8.659	+	NM_001178034 DQ857322 AK296490 NM_001004360 AY387785 AB040925 AB385475 DQ857323	-2623824	+	NM_001178037 DQ857321	-2721195	+	AK055256 BC038514 NM_001178036	-3324319	+	NM_006773 TSC_hg19_v1_chr2_+_118572276 BC024739	28783	+	AK001467 TSC_hg19_v1_chr2_+_118572283	28798	+	TSC_hg19_v1_chr2_+_118572298 BC003360 BC001238	28832	+	NM_001178034|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857322|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK296490|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001004360|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AY387785|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AB040925|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857323|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178037|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857321|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_006773|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC024739|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##AK001467|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC003360|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC001238|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	0.959389	CTCF.p2:2:0.959
chr8	124775777	124775909	reg1017631.p1	8.659	+	CR541838 BC125158 AJ306450 Z11502 NM_001003954 NM_004306 AK290281 AK223374	-26224	-	AB196636 BC127886 NM_001081675	-110666	-	TSC_hg19_v1_chr8_-_124553499 NM_001242463 NM_058229	-222362	-	TSC_hg19_v1_chr8_+_124780681 AK300603 BC030520	4847	+	TSC_hg19_v1_chr8_+_124780758 DQ228141 NM_144963 BC144630	4970	+	AB196633 NM_001039112	88383	+	CR541838|ANXA13|312|annexin A13##BC125158|ANXA13|312|annexin A13##AJ306450|ANXA13|312|annexin A13##Z11502|ANXA13|312|annexin A13##NM_001003954|ANXA13|312|annexin A13##NM_004306|ANXA13|312|annexin A13##AK290281|ANXA13|312|annexin A13##AK223374|ANXA13|312|annexin A13##AB196636|KLHL38|340359|kelch-like 38 (Drosophila)##BC127886|KLHL38|340359|kelch-like 38 (Drosophila)##NM_001081675|KLHL38|340359|kelch-like 38 (Drosophila)##NM_001242463|FBXO32|114907|F-box protein 32##NM_058229|FBXO32|114907|F-box protein 32##AK300603|FAM91A1|157769|family with sequence similarity 91, member A1##BC030520|FAM91A1|157769|family with sequence similarity 91, member A1##DQ228141|FAM91A1|157769|family with sequence similarity 91, member A1##NM_144963|FAM91A1|157769|family with sequence similarity 91, member A1##BC144630|FAM91A1|157769|family with sequence similarity 91, member A1##AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)	0.318855	CTCF.p2:-9:0.319
chr12	46736425	46736531	reg1012971.p1	8.658	+	NM_001077484 NM_030674	-73271	-	BX647547 TSC_hg19_v1_chr12_-_46662796 AK225639 AF271070 BX648495 AK225778 AK308129	-73660	-	TSC_hg19_v1_chr12_-_46662776 BC010620 BX648676	-73735	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	29811	-	TSC_hg19_v1_chr12_-_46766619 NM_018976	30125	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	483278	-	NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##BX647547|SLC38A1|81539|solute carrier family 38, member 1##AK225639|SLC38A1|81539|solute carrier family 38, member 1##AF271070|SLC38A1|81539|solute carrier family 38, member 1##BX648495|SLC38A1|81539|solute carrier family 38, member 1##AK225778|SLC38A1|81539|solute carrier family 38, member 1##AK308129|SLC38A1|81539|solute carrier family 38, member 1##BC010620|SLC38A1|81539|solute carrier family 38, member 1##BX648676|SLC38A1|81539|solute carrier family 38, member 1##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4	0.018888	
chr7	111381925	111382066	reg1016003.p1	8.658	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	-179511	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-650872	+	NM_001024607	-2857359	-	TSC_hg19_v1_chr7_-_111428948 AK294820	47016	-	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	464270	-	TSC_hg19_v1_chr7_-_111846458 AK095906 AK309605 NM_014705	464467	-	AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AK294820|DOCK4|9732|dedicator of cytokinesis 4##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4##AK095906|DOCK4|9732|dedicator of cytokinesis 4##AK309605|DOCK4|9732|dedicator of cytokinesis 4##NM_014705|DOCK4|9732|dedicator of cytokinesis 4	0.804425	CTCF.p2:-14:0.804
chr8	134581976	134582102	reg1015198.p2	8.658	+	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-272542	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-378709	+	NM_001045556 NM_001045557	-466730	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	2058	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1126755	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1143040	-	AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.994947	CTCF.p2:-10:0.995
chrX	83100539	83100668	reg1014822.p1	8.658	+	AK314967 NM_000307 TSC_hg19_v1_chrX_+_82763302 X82324 AB464667	-337304	+	TSC_hg19_v1_chrX_+_80457600 BC016709 AL136718 AK129610 AF042081 AK310011 AB590910 CR533478	-2642955	+	TSC_hg19_v1_chrX_+_80457572 AK309351	-2643027	+	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	15568	+	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	342369	-	BC101720 BC101722 BC143522 BX538112 AK055240 AK290050 BX649166 NM_001177478 NM_001177479 NM_144657	656839	-	AK314967|POU3F4|5456|POU class 3 homeobox 4##NM_000307|POU3F4|5456|POU class 3 homeobox 4##X82324|POU3F4|5456|POU class 3 homeobox 4##BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC101720|HDX|139324|highly divergent homeobox##BC101722|HDX|139324|highly divergent homeobox##BC143522|HDX|139324|highly divergent homeobox##BX538112|HDX|139324|highly divergent homeobox##AK055240|HDX|139324|highly divergent homeobox##AK290050|HDX|139324|highly divergent homeobox##BX649166|HDX|139324|highly divergent homeobox##NM_001177478|HDX|139324|highly divergent homeobox##NM_001177479|HDX|139324|highly divergent homeobox##NM_144657|HDX|139324|highly divergent homeobox	0.976656	CTCF.p2:5:0.977
chr19	47270045	47270161	reg1014195.p1	8.657	+	TSC_hg19_v1_chr19_-_47249708 NM_001039877 NM_013403	-20390	-	TSC_hg19_v1_chr19_-_47249688 AF212940 AB527410 BC034604	-20409	-	BC014278 AB209003 TSC_hg19_v1_chr19_-_47249674	-20448	-	TSC_hg19_v1_chr19_-_47288122 AK316546 AK299137 NM_001145145 AK055630	17997	-	AK293433 AK301661 NM_001145144	20439	-	AF334818 GQ919058 AB527629 CU674018 DQ892148 DQ895345 AF102826 TSC_hg19_v1_chr19_-_47291260 BC000062 AK125222	21170	-	NM_001039877|STRN4|29888|striatin, calmodulin binding protein 4##NM_013403|STRN4|29888|striatin, calmodulin binding protein 4##AF212940|STRN4|29888|striatin, calmodulin binding protein 4##BC034604|STRN4|29888|striatin, calmodulin binding protein 4##BC014278|STRN4|29888|striatin, calmodulin binding protein 4##AB209003|STRN4|29888|striatin, calmodulin binding protein 4##AK316546|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK299137|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145145|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK055630|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK293433|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK301661|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145144|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF334818|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##GQ919058|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ892148|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ895345|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF102826|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC000062|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK125222|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5	0.990981	CTCF.p2:14:0.991
chrX	118744204	118744305	reg1013691.p1	8.657	+	BC047878 BC068514 BC040379 AY208891 NM_001173487 NM_017544	-4426	-	EF165090 EF165091 EF165093 AJ011812 EF158333 EF216688 EF216689 NM_001173488	-17272	-	BC042021 NM_181777	-29957	+	D50918 AB384441 CU679289 CU680116 CU690318 TSC_hg19_v1_chrX_-_118827108 BC069231	82831	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	82878	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	82925	-	BC047878|NKRF|55922|NFKB repressing factor##BC068514|NKRF|55922|NFKB repressing factor##BC040379|NKRF|55922|NFKB repressing factor##AY208891|NKRF|55922|NFKB repressing factor##NM_001173487|NKRF|55922|NFKB repressing factor##NM_017544|NKRF|55922|NFKB repressing factor##EF165090|NKRF|55922|NFKB repressing factor##EF165091|NKRF|55922|NFKB repressing factor##EF165093|NKRF|55922|NFKB repressing factor##AJ011812|NKRF|55922|NFKB repressing factor##EF158333|NKRF|55922|NFKB repressing factor##EF216688|NKRF|55922|NFKB repressing factor##EF216689|NKRF|55922|NFKB repressing factor##NM_001173488|NKRF|55922|NFKB repressing factor##BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D50918|SEPT6|23157|septin 6##BC069231|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6	0.030625	
chr11	72524062	72524187	reg1015236.p1	8.656	+	AB209473 AK095668 BC035482 BC007919 BC014033 AK310301 AK315255 NM_006645	-19428	-	TSC_hg19_v1_chr11_-_72463454 AY553630 NM_001040118	-60658	-	AB018325 NM_001135190 NM_015242	-90734	-	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	1281	+	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	1358	+	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	328925	-	AK095668|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC035482|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC007919|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC014033|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AK315255|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##NM_006645|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AY553630|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_001040118|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##AB018325|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_001135190|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_015242|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2	0.013918	
chr1	37642991	37643121	reg1015555.p1	8.656	+	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	-143281	-	NM_000760 NM_156039 NM_172313	-694142	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-694572	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	297041	+	TSC_hg19_v1_chr1_+_37940140 AK026884	297094	+	FJ695517 TSC_hg19_v1_chr1_+_37940180 AK093343 AX748065 BC005001	297131	+	AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A##FJ695517|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK093343|ZC3H12A|80149|zinc finger CCCH-type containing 12A##BC005001|ZC3H12A|80149|zinc finger CCCH-type containing 12A	1.018233	CTCF.p2:-1:0.968
chr4	144296917	144297072	reg1017139.p1	8.656	+	NM_002039 NM_207123 AK289767 BC064848	-38979	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	-190869	+	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	-190930	+	TSC_hg19_v1_chr4_+_144434860 NM_003601 AK316444 AK302841 BC023144 AB010882 AK308424	137734	+	AB384709 TSC_hg19_v1_chr4_+_144435139	138120	+	TSC_hg19_v1_chr4_+_144480613 AX721285 AX721289 BC025996	183622	+	NM_002039|GAB1|2549|GRB2-associated binding protein 1##NM_207123|GAB1|2549|GRB2-associated binding protein 1##AK289767|GAB1|2549|GRB2-associated binding protein 1##BC064848|GAB1|2549|GRB2-associated binding protein 1##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##BC025996|GUSBP5|441046|glucuronidase, beta pseudogene 5	0.886909	CTCF.p2:10:0.887
chr8	8637273	8637401	reg1012961.p1	8.656	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	-77639	+	AK122582 NM_001080826	-398115	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-461449	-	TSC_hg19_v1_chr8_-_8751060 NM_004225	113601	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	223028	+	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	223168	+	AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1	1.203954	CTCF.p2:7:0.931	CTCF.p2:-24:0.208
chr1	145402114	145402255	reg1014168.p2	8.655	+	AY894562 AY894570 NM_001039703	-108883	+	TSC_hg19_v1_chr1_+_145209107 NM_203458 BC010154 AK075065 BC090943 BC019835 AK092351 AK098372 AX747492 BC065219 AK293876 BC084572	-193063	+	TSC_hg19_v1_chr1_+_145096519 CU674670 DQ892584 DQ895801	-305652	+	NM_145277 NM_202004 NM_213652 NM_213653 AK223575 AK092682 AK315852 AX747669 BC017926 AK096905 AK290831 AK292742 AK092692 AK124273 AX747673 BC085604	11079	+	TSC_hg19_v1_chr1_+_145438489 NM_006472 AK301203 BX537824 AK226090 S73591 BC093702 BC093704 AB527234 AY594328 BC024305 AK301148	36492	+	TSC_hg19_v1_chr1_-_145470375 AK092209 AK056984 BC004355 NM_032305 BC050418	68204	-	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8##NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10##NM_203458|NOTCH2NL|388677|notch 2 N-terminal like##BC010154|NOTCH2NL|388677|notch 2 N-terminal like##AK075065|NOTCH2NL|388677|notch 2 N-terminal like##BC090943|NOTCH2NL|388677|notch 2 N-terminal like##BC019835|NOTCH2NL|388677|notch 2 N-terminal like##BC065219|NOTCH2NL|388677|notch 2 N-terminal like##BC084572|NOTCH2NL|388677|notch 2 N-terminal like##DQ892584|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##DQ895801|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##NM_145277|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_202004|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213652|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213653|HFE2|148738|hemochromatosis type 2 (juvenile)##AK223575|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092682|HFE2|148738|hemochromatosis type 2 (juvenile)##AK315852|HFE2|148738|hemochromatosis type 2 (juvenile)##BC017926|HFE2|148738|hemochromatosis type 2 (juvenile)##AK096905|HFE2|148738|hemochromatosis type 2 (juvenile)##AK290831|HFE2|148738|hemochromatosis type 2 (juvenile)##AK292742|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092692|HFE2|148738|hemochromatosis type 2 (juvenile)##AK124273|HFE2|148738|hemochromatosis type 2 (juvenile)##BC085604|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_006472|TXNIP|10628|thioredoxin interacting protein##AK301203|TXNIP|10628|thioredoxin interacting protein##BX537824|TXNIP|10628|thioredoxin interacting protein##AK226090|TXNIP|10628|thioredoxin interacting protein##S73591|TXNIP|10628|thioredoxin interacting protein##BC093702|TXNIP|10628|thioredoxin interacting protein##BC093704|TXNIP|10628|thioredoxin interacting protein##AY594328|TXNIP|10628|thioredoxin interacting protein##BC024305|TXNIP|10628|thioredoxin interacting protein##AK301148|TXNIP|10628|thioredoxin interacting protein##AK092209|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##AK056984|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC004355|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##NM_032305|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC050418|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like	0.999304	CTCF.p2:1:0.999
chr18	47255054	47255203	reg1017535.p1	8.655	+	AK315252 TSC_hg19_v1_chr18_+_47088426 AF118767 AK291799 NM_006033 AK300333 BC060825 AY358928	-166700	+	TSC_hg19_v1_chr18_+_47087059 AK125344	-168066	+	TSC_hg19_v1_chr18_-_47018852 AK304659 AK311828 BC066323 BC017831 BC066324 NM_000985 NM_001035006 NM_001199340 NM_001199345 NM_001199356	-236240	-	CU674934 DQ893376 DQ896697 AB529169 BC001918 TSC_hg19_v1_chr18_-_47339904 AK225457 D16294	84786	-	TSC_hg19_v1_chr18_-_47340253 AK054673 NM_006111 AK314462	85142	-	TSC_hg19_v1_chr18_+_47340396 AK123464	85263	+	AK315252|LIPG|9388|lipase, endothelial##AF118767|LIPG|9388|lipase, endothelial##AK291799|LIPG|9388|lipase, endothelial##NM_006033|LIPG|9388|lipase, endothelial##AK300333|LIPG|9388|lipase, endothelial##BC060825|LIPG|9388|lipase, endothelial##AY358928|LIPG|9388|lipase, endothelial##AK125344|LIPG|9388|lipase, endothelial##AK304659|RPL17|6139|ribosomal protein L17##AK311828|RPL17|6139|ribosomal protein L17##BC066323|RPL17|6139|ribosomal protein L17##BC017831|RPL17|6139|ribosomal protein L17##BC066324|RPL17|6139|ribosomal protein L17##NM_000985|RPL17|6139|ribosomal protein L17##NM_001035006|RPL17|6139|ribosomal protein L17##NM_001199340|RPL17|6139|ribosomal protein L17##NM_001199345|RPL17|6139|ribosomal protein L17##NM_001199356|RPL17-C18ORF32|100526842|RPL17-C18orf32 readthrough##DQ893376|ACAA2|10449|acetyl-CoA acyltransferase 2##DQ896697|ACAA2|10449|acetyl-CoA acyltransferase 2##BC001918|ACAA2|10449|acetyl-CoA acyltransferase 2##AK225457|ACAA2|10449|acetyl-CoA acyltransferase 2##D16294|ACAA2|10449|acetyl-CoA acyltransferase 2##AK054673|ACAA2|10449|acetyl-CoA acyltransferase 2##NM_006111|ACAA2|10449|acetyl-CoA acyltransferase 2##AK314462|ACAA2|10449|acetyl-CoA acyltransferase 2	0.168037	
chr12	48232509	48232614	reg1003282.p4	8.653	+	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	-18897	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-65527	+	AK092448 NM_001098531	-79687	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	66240	-	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	124777	+	TSC_hg19_v1_chr12_+_48357387 AK310035 AK313698 AK299154 BC107792	124859	+	AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C##AK310035|TMEM106C|79022|transmembrane protein 106C##AK313698|TMEM106C|79022|transmembrane protein 106C##AK299154|TMEM106C|79022|transmembrane protein 106C##BC107792|TMEM106C|79022|transmembrane protein 106C	0.945439	CTCF.p2:-21:0.945
chr13	113271400	113271538	reg1015556.p1	8.653	+	TSC_hg19_v1_chr13_-_113260770 AK125472	-10702	-	TSC_hg19_v1_chr13_-_113242484 AK314785	-28978	-	TSC_hg19_v1_chr13_-_113242468 BC046634 NM_006322	-28996	-	AK129953 NM_207440	29888	+	TSC_hg19_v1_chr13_-_113344130 AK057085	72637	-	TSC_hg19_v1_chr13_+_113344493 NM_015205 NM_032189	73110	+	AK314785|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC046634|TUBGCP3|10426|tubulin, gamma complex associated protein 3##NM_006322|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK129953|C13orf35|400165|chromosome 13 open reading frame 35##NM_207440|C13orf35|400165|chromosome 13 open reading frame 35##AK057085|LOC440149|440149|uncharacterized LOC440149##NM_015205|ATP11A|23250|ATPase, class VI, type 11A##NM_032189|ATP11A|23250|ATPase, class VI, type 11A	0.607896	CTCF.p2:7:0.608
chr7	113666695	113666833	reg1015085.p1	8.653	+	X78578 AF024579 HQ258594 BC070313 BC056666 NM_002711 BC126451 BC126453	-107681	-	TSC_hg19_v1_chr7_-_112758613 BC107860	-908135	-	TSC_hg19_v1_chr7_-_112758606 BC065765 BX537645	-908158	-	TSC_hg19_v1_chr7_+_113726381 AK131266	59657	+	TSC_hg19_v1_chr7_+_113726514 AF454830	59739	+	TSC_hg19_v1_chr7_+_113726599 CR749236	59839	+	X78578|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AF024579|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##HQ258594|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC070313|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC056666|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##NM_002711|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126451|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126453|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC107860|LOC401397|401397|uncharacterized LOC401397##BC065765|LOC401397|401397|uncharacterized LOC401397##BX537645|LOC401397|401397|uncharacterized LOC401397##AK131266|FOXP2|93986|forkhead box P2##AF454830|FOXP2|93986|forkhead box P2##CR749236|FOXP2|93986|forkhead box P2	0.999795	CTCF.p2:-14:1.000
chr8	126841118	126841233	reg1012294.p2	8.653	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-398596	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-737078	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-737118	-	TSC_hg19_v1_chr8_-_126963395 BX648371	122238	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	729380	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	729549	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.833451	CTCF.p2:-3:0.833
chr11	79419504	79419606	reg1015046.p1	8.652	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-267831	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-1133660	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-1133763	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	3025343	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	3191962	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	3193219	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.567195	CTCF.p2:-7:0.567
chr19	6772284	6772394	reg1015065.p1	8.652	+	TSC_hg19_v1_chr19_-_6767447 AK225386 AK292781 AK299406 AK310659 BC006281 AF124249 AY358406 NM_005490 AK290293	-4832	-	TSC_hg19_v1_chr19_+_6739712 NM_004240 AK313296 AB007845 AB072596 AK223109 AF502289 AJ000414 AY081141 BC013002 CU680464 DQ892747 DQ895993 AF380114 BT006698 BT020167 BT020171 CR536513	-32605	+	TSC_hg19_v1_chr19_-_6737615 BC146909 AX775899 NM_001080452	-34721	-	TSC_hg19_v1_chr19_+_6772718 NM_005428 AK225710 AK313307	385	+	TSC_hg19_v1_chr19_+_6772811 AB590871	469	+	BC059395 NM_001974 X81479 AK297003 AK131562 AK290401 AK291518 AK313495 AK297011 CU687372	115258	+	AK225386|SH2D3A|10045|SH2 domain containing 3A##AK292781|SH2D3A|10045|SH2 domain containing 3A##AK299406|SH2D3A|10045|SH2 domain containing 3A##AK310659|SH2D3A|10045|SH2 domain containing 3A##BC006281|SH2D3A|10045|SH2 domain containing 3A##AF124249|SH2D3A|10045|SH2 domain containing 3A##AY358406|SH2D3A|10045|SH2 domain containing 3A##NM_005490|SH2D3A|10045|SH2 domain containing 3A##AK290293|SH2D3A|10045|SH2 domain containing 3A##NM_004240|TRIP10|9322|thyroid hormone receptor interactor 10##AK313296|TRIP10|9322|thyroid hormone receptor interactor 10##AB007845|TRIP10|9322|thyroid hormone receptor interactor 10##AB072596|TRIP10|9322|thyroid hormone receptor interactor 10##AK223109|TRIP10|9322|thyroid hormone receptor interactor 10##AF502289|TRIP10|9322|thyroid hormone receptor interactor 10##AJ000414|TRIP10|9322|thyroid hormone receptor interactor 10##AY081141|TRIP10|9322|thyroid hormone receptor interactor 10##BC013002|TRIP10|9322|thyroid hormone receptor interactor 10##DQ892747|TRIP10|9322|thyroid hormone receptor interactor 10##DQ895993|TRIP10|9322|thyroid hormone receptor interactor 10##AF380114|TRIP10|9322|thyroid hormone receptor interactor 10##BT006698|TRIP10|9322|thyroid hormone receptor interactor 10##BT020167|TRIP10|9322|thyroid hormone receptor interactor 10##BT020171|TRIP10|9322|thyroid hormone receptor interactor 10##CR536513|TRIP10|9322|thyroid hormone receptor interactor 10##BC146909|GPR108|56927|G protein-coupled receptor 108##AX775899|GPR108|56927|G protein-coupled receptor 108##NM_001080452|GPR108|56927|G protein-coupled receptor 108##NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor##BC059395|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_001974|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##X81479|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297003|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK131562|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK290401|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK291518|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK313495|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297011|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1	0.178604	
chr6	132851654	132851764	reg1015159.p1	8.652	+	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	-17459	-	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	-129093	-	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	-579295	-	BC069083 NM_175057 AY183469	7718	+	AB529265 AY183468 BC069166 NM_053278	22121	+	AB529264 AY183470 BC069157 NM_175067	39751	+	U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7##DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##BC069083|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##NM_175057|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183469|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183468|TAAR8|83551|trace amine associated receptor 8##BC069166|TAAR8|83551|trace amine associated receptor 8##NM_053278|TAAR8|83551|trace amine associated receptor 8##AY183470|TAAR6|319100|trace amine associated receptor 6##BC069157|TAAR6|319100|trace amine associated receptor 6##NM_175067|TAAR6|319100|trace amine associated receptor 6	0.998645	CTCF.p2:9:0.999
chr6	5398816	5398962	reg1018162.p1	8.652	+	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-137199	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-137627	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-137723	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	608252	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	608808	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	921996	-	NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide	0.041387	
chr10	72147441	72147563	reg1015307.p2	8.651	+	AK094734 TSC_hg19_v1_chr10_-_72142380 AK001613 AK001706 NM_018205 NM_018239	-5138	-	BC024001 AY358318 NM_207119	-6122	-	TSC_hg19_v1_chr10_-_72083680 AL122117	-63804	-	NM_004096 TSC_hg19_v1_chr10_+_72163879	16368	+	TSC_hg19_v1_chr10_+_72163900 AK313724	16401	+	TSC_hg19_v1_chr10_+_72163919 BC050633	16420	+	AK094734|LRRC20|55222|leucine rich repeat containing 20##AK001613|LRRC20|55222|leucine rich repeat containing 20##AK001706|LRRC20|55222|leucine rich repeat containing 20##NM_018205|LRRC20|55222|leucine rich repeat containing 20##NM_018239|LRRC20|55222|leucine rich repeat containing 20##BC024001|LRRC20|55222|leucine rich repeat containing 20##AY358318|LRRC20|55222|leucine rich repeat containing 20##NM_207119|LRRC20|55222|leucine rich repeat containing 20##AL122117|LRRC20|55222|leucine rich repeat containing 20##NM_004096|EIF4EBP2|1979|eukaryotic translation initiation factor 4E binding protein 2##AK313724|EIF4EBP2|1979|eukaryotic translation initiation factor 4E binding protein 2##BC050633|EIF4EBP2|1979|eukaryotic translation initiation factor 4E binding protein 2	0.215466	
chr15	84723413	84723512	reg1014398.p2	8.651	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-400635	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-607234	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-607402	+	NM_001243531	117779	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	420819	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	474010	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.6704	CTCF.p2:1:0.670
chr19	50006464	50006590	reg1015580.p2	8.651	+	TSC_hg19_v1_chr19_+_49999690 X06617 BC016378 BC070224 DQ893225 DQ896555	-6818	+	TSC_hg19_v1_chr19_+_49999686 AK311809 D28407	-6843	+	NM_001015 TSC_hg19_v1_chr19_+_49999653	-6880	+	NM_001136019 BC091487	9050	+	TSC_hg19_v1_chr19_+_50015917 AK075532 BX647163	9367	+	NM_004107 TSC_hg19_v1_chr19_+_50016469 AK074734	9925	+	X06617|RPS11|6205|ribosomal protein S11##BC016378|RPS11|6205|ribosomal protein S11##BC070224|RPS11|6205|ribosomal protein S11##DQ893225|RPS11|6205|ribosomal protein S11##DQ896555|RPS11|6205|ribosomal protein S11##AK311809|RPS11|6205|ribosomal protein S11##NM_001015|RPS11|6205|ribosomal protein S11##NM_001136019|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BC091487|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##AK075532|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BX647163|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##NM_004107|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##AK074734|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha	0.056648	
chr7	150715358	150715484	reg1014658.p2	8.651	+	AK292928 AK302686 M93718 AK315213 TSC_hg19_v1_chr7_+_150690869 AK223636 AK225827 M95296 BC069465 HQ257992 AF400594 DQ256129 DQ256130 DQ256131 NM_001160109 NM_001160110 NM_001160111	-24557	+	NM_000603 BC063294 AK300390	-27254	+	TSC_hg19_v1_chr7_-_150675385 DQ525913 NM_000238 NM_172056	-40052	-	BC128587 AK096734 AY515311 NM_173681	6147	-	TSC_hg19_v1_chr7_+_150725538 AK128129 NM_007188 AK094636 AK002018 AK094005 AK222911 AK294344 AK310796 AK314721 BC141814 BC141836 BC151235 AF047690 BC130036 AK024401 BC143080 BC146829	10142	+	BC030282 NM_004769 NM_020321 NM_020322	30183	+	AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##HQ257992|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ525913|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_000238|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172056|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##NM_007188|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK094636|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK002018|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK094005|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK222911|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK294344|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK310796|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK314721|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC141814|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC141836|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC151235|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AF047690|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK024401|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC143080|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC146829|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC030282|ACCN3|9311|amiloride-sensitive cation channel 3##NM_004769|ACCN3|9311|amiloride-sensitive cation channel 3##NM_020321|ACCN3|9311|amiloride-sensitive cation channel 3##NM_020322|ACCN3|9311|amiloride-sensitive cation channel 3	0.946102	CTCF.p2:-12:0.946
chr6	44635989	44636101	reg1014979.p1	8.650	+	TSC_hg19_v1_chr6_+_44355461 AK128737 AK299738 BC001568 AB007892 AB590067 CU674768 DQ891623 DQ894814 U86753	-280545	+	NM_001253 TSC_hg19_v1_chr6_+_44355294	-280773	+	NM_145026 AK058171	-325605	+	NM_001015051 NM_001024630 AF053952	660011	+	AF073930 NM_003599 TSC_hg19_v1_chr6_-_45345614 AK303838 BC035816 BC050384 NM_181356 AK313874	709630	-	TSC_hg19_v1_chr6_+_45389825 NM_004348	753820	+	AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_001253|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_145026|SPATS1|221409|spermatogenesis associated, serine-rich 1##AK058171|SPATS1|221409|spermatogenesis associated, serine-rich 1##NM_001015051|RUNX2|860|runt-related transcription factor 2##NM_001024630|RUNX2|860|runt-related transcription factor 2##AF053952|RUNX2|860|runt-related transcription factor 2##AF073930|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_003599|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK303838|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC035816|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC050384|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_181356|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK313874|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_004348|RUNX2|860|runt-related transcription factor 2	0.0	
chr14	34792292	34792450	reg1017077.p1	8.648	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	-372222	-	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1383881	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1993835	+	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	139116	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	216514	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	306984	-	BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6	0.996975	CTCF.p2:-21:0.997
chr5	142396465	142396607	reg1015297.p1	8.648	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-246228	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-246564	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-318965	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	386287	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	386570	-	BC015610 TSC_hg19_v1_chr5_-_142783214	386675	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr17	68618669	68618778	reg1016312.p1	8.647	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-453027	+	BC033038 NM_170742	-517729	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-547293	+	TSC_hg19_v1_chr17_-_70116937 AL833139	1498215	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	1498436	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	1498447	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.920712	CTCF.p2:9:0.921
chr5	30040761	30040872	reg1015844.p1	8.647	+	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	-2568413	+	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	-3002145	-	NM_006727	-5395732	-	NM_004932 TSC_hg19_v1_chr5_+_31193792 AK291290	1152980	+	TSC_hg19_v1_chr5_+_31193875 BC000019 AK024238	1153061	+	TSC_hg19_v1_chr5_-_31532201 AK308093 AF189011 BC054003 BX647724 NM_001100412 NM_013235	1491406	-	BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK308093|DROSHA|29102|drosha, ribonuclease type III##AF189011|DROSHA|29102|drosha, ribonuclease type III##BC054003|DROSHA|29102|drosha, ribonuclease type III##BX647724|DROSHA|29102|drosha, ribonuclease type III##NM_001100412|DROSHA|29102|drosha, ribonuclease type III##NM_013235|DROSHA|29102|drosha, ribonuclease type III	0.896996	CTCF.p2:-12:0.897
chr8	90265642	90265739	reg1014420.p1	8.647	+	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	-925944	-	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	-1379431	-	AK093121 AX747937 BC117326 BC117328 NM_173538	-2387017	+	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	504340	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	504594	+	AF061326 NM_004337	648405	+	AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF061326|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_004337|OSGIN2|734|oxidative stress induced growth inhibitor family member 2	0.889514	CTCF.p2:-1:0.890
chr14	104597405	104597533	reg1017001.p1	8.646	+	AX781433 BX247999 NM_001080464 AX721044 BC035836 BC136637 AX781428 AX781429 AX781430 AX781431 AX781435	-45408	+	TSC_hg19_v1_chr14_+_104394792 NM_153046	-202686	+	AK310120 TSC_hg19_v1_chr14_-_104387867 AK309355 AK312099 AF054175 AK309499 DQ426862 NM_001127393 NM_004894	-209590	-	NM_015656	7590	+	TSC_hg19_v1_chr14_+_104605441 AB033062	7983	+	AK095913 NM_001008404 AK297818 AK309489 BC041103	448617	+	AX781433|ASPG|374569|asparaginase homolog (S. cerevisiae)##BX247999|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_001080464|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC035836|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC136637|ASPG|374569|asparaginase homolog (S. cerevisiae)##AX781435|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_153046|TDRD9|122402|tudor domain containing 9##AK310120|C14orf2|9556|chromosome 14 open reading frame 2##AK309355|C14orf2|9556|chromosome 14 open reading frame 2##AK312099|C14orf2|9556|chromosome 14 open reading frame 2##AF054175|C14orf2|9556|chromosome 14 open reading frame 2##AK309499|C14orf2|9556|chromosome 14 open reading frame 2##DQ426862|C14orf2|9556|chromosome 14 open reading frame 2##NM_001127393|C14orf2|9556|chromosome 14 open reading frame 2##NM_004894|C14orf2|9556|chromosome 14 open reading frame 2##NM_015656|KIF26A|26153|kinesin family member 26A##AB033062|KIF26A|26153|kinesin family member 26A##AK095913|C14orf180|400258|chromosome 14 open reading frame 180##NM_001008404|C14orf180|400258|chromosome 14 open reading frame 180##AK297818|C14orf180|400258|chromosome 14 open reading frame 180##AK309489|C14orf180|400258|chromosome 14 open reading frame 180##BC041103|C14orf180|400258|chromosome 14 open reading frame 180	0.999496	CTCF.p2:5:0.999
chr2	11925174	11925306	reg1015492.p2	8.646	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-38465	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-114949	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-242397	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	932013	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	932676	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	933157	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.999849	CTCF.p2:-8:1.000
chr2	120584080	120584173	reg1013271.p1	8.646	+	M68941 NM_002830 TSC_hg19_v1_chr2_+_120517497 AK314836 BC010674	-66726	+	TSC_hg19_v1_chr2_+_120436776 AK057313 AK308503 AK311734	-147345	+	TSC_hg19_v1_chr2_+_120436745 AK130088 NM_001105198 NM_001105199 NM_030577 AK096890 AK299078 BC004404	-147392	+	TSC_hg19_v1_chr2_+_120770604 NM_001184937 NM_001184939 NM_020909	186477	+	TSC_hg19_v1_chr2_+_120770652 AK023019 BC054508 AK290895 BC032822 NM_001184938	186607	+	TSC_hg19_v1_chr2_-_120980957 BC016849 AK289880 BC080607 AK024632	396811	-	M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK057313|LOC100125918|100125918|uncharacterized LOC100125918##AK308503|TMEM177|80775|transmembrane protein 177##AK130088|TMEM177|80775|transmembrane protein 177##NM_001105198|TMEM177|80775|transmembrane protein 177##NM_001105199|TMEM177|80775|transmembrane protein 177##NM_030577|TMEM177|80775|transmembrane protein 177##AK096890|TMEM177|80775|transmembrane protein 177##AK299078|TMEM177|80775|transmembrane protein 177##BC004404|TMEM177|80775|transmembrane protein 177##NM_001184937|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184939|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_020909|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK023019|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC054508|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK290895|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC032822|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184938|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC016849|TMEM185B|79134|transmembrane protein 185B##BC080607|TMEM185B|79134|transmembrane protein 185B##AK024632|TMEM185B|79134|transmembrane protein 185B	0.9623	CTCF.p2:9:0.962
chr4	1728108	1728225	reg1014219.p1	8.646	+	TSC_hg19_v1_chr4_+_1723248 AK302463 AK225631 BC106071 AF093543 AF479620 AJ243997 BC111771	-4898	+	TSC_hg19_v1_chr4_+_1723215 NM_006342	-4949	+	TSC_hg19_v1_chr4_-_1722981 BC126370 BC009331 BC018921 NM_001127266 NM_138385	-5135	-	TSC_hg19_v1_chr4_+_1795019 AB209441 NM_000142 NM_001163213 NM_022965	66860	+	DQ893606 AK293572 TSC_hg19_v1_chr4_-_1857827 BC014500 BC021208 AF061025 NM_012318	129665	-	AK289697 TSC_hg19_v1_chr4_+_1873132 NM_001042424	144918	+	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3##NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC126370|TMEM129|92305|transmembrane protein 129##BC009331|TMEM129|92305|transmembrane protein 129##BC018921|TMEM129|92305|transmembrane protein 129##NM_001127266|TMEM129|92305|transmembrane protein 129##NM_138385|TMEM129|92305|transmembrane protein 129##AB209441|FGFR3|2261|fibroblast growth factor receptor 3##NM_000142|FGFR3|2261|fibroblast growth factor receptor 3##NM_001163213|FGFR3|2261|fibroblast growth factor receptor 3##NM_022965|FGFR3|2261|fibroblast growth factor receptor 3##DQ893606|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK293572|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC014500|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC021208|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AF061025|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##NM_012318|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK289697|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_001042424|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	0.987683	CTCF.p2:-10:0.988
chr6	52152104	52152220	reg1007731.p2	8.646	+	TSC_hg19_v1_chr6_-_52149551 D38073 AK299566 NM_002388 AK301704	-2583	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	-2642	-	AB528319 DQ893654 DQ895840 TSC_hg19_v1_chr6_-_52149506 AK312928 AK300754 X62153 AY032603	-2671	-	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	74795	+	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	132916	+	AK297632 NM_001172420	133642	+	D38073|MCM3|4172|minichromosome maintenance complex component 3##AK299566|MCM3|4172|minichromosome maintenance complex component 3##NM_002388|MCM3|4172|minichromosome maintenance complex component 3##AK301704|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3##DQ893654|MCM3|4172|minichromosome maintenance complex component 3##DQ895840|MCM3|4172|minichromosome maintenance complex component 3##AK312928|MCM3|4172|minichromosome maintenance complex component 3##AK300754|MCM3|4172|minichromosome maintenance complex component 3##X62153|MCM3|4172|minichromosome maintenance complex component 3##AY032603|MCM3|4172|minichromosome maintenance complex component 3##NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1	0.456553	CTCF.p2:-11:0.457
chr6	151656089	151656219	reg1017912.p1	8.645	+	TSC_hg19_v1_chr6_+_151646810 NM_144497 AK307739 BC070151 AB003476 BC117679 BC117680	-9377	+	TSC_hg19_v1_chr6_+_151561677 BC000188 BC022814 BC015830 AB384670 AF001504	-94416	+	TSC_hg19_v1_chr6_+_151561578 BC006094	-94573	+	TSC_hg19_v1_chr6_-_151712650 BC020172 NM_020861 AK092886 AX747790 AK291942	56556	-	TSC_hg19_v1_chr6_-_151773262 BC119683 AK000634 BC106065 AK292339 NM_017909	117104	-	AK022972 NM_024573	117267	+	NM_144497|AKAP12|9590|A kinase (PRKA) anchor protein 12##AK307739|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC070151|AKAP12|9590|A kinase (PRKA) anchor protein 12##AB003476|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC117679|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC117680|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC000188|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC022814|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC015830|AKAP12|9590|A kinase (PRKA) anchor protein 12##AF001504|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC020172|ZBTB2|57621|zinc finger and BTB domain containing 2##NM_020861|ZBTB2|57621|zinc finger and BTB domain containing 2##AK092886|ZBTB2|57621|zinc finger and BTB domain containing 2##AK291942|ZBTB2|57621|zinc finger and BTB domain containing 2##BC119683|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK000634|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##BC106065|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK292339|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##NM_017909|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK022972|C6orf211|79624|chromosome 6 open reading frame 211##NM_024573|C6orf211|79624|chromosome 6 open reading frame 211	0.996116	CTCF.p2:0:0.996
chr8	29908658	29908825	reg1014702.p1	8.645	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-700671	-	AL137704 NM_057158	-702420	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-788127	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	31733	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	31831	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	44202	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.96916	CTCF.p2:19:0.969
chr11	123425730	123425852	reg1014999.p2	8.644	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	-29287	+	TSC_hg19_v1_chr11_+_123396366 AK127457	-29436	+	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	-359786	-	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	5182	+	AB033027 TSC_hg19_v1_chr11_+_123431038	5246	+	AJ243396 AB032984 TSC_hg19_v1_chr11_-_123525042	99170	-	NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AK127457|GRAMD1B|57476|GRAM domain containing 1B##AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B##AB033027|GRAMD1B|57476|GRAM domain containing 1B##AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta	0.992402	CTCF.p2:9:0.992
chr12	51128566	51128676	reg1014927.p1	8.644	+	TSC_hg19_v1_chr12_+_50898778 BC075027	-229722	+	TSC_hg19_v1_chr12_+_50898767 AK091597 AX747083 NM_173602	-229866	+	TSC_hg19_v1_chr12_+_50869532 AF131755	-259034	+	TSC_hg19_v1_chr12_+_51157883 NM_005171 AK313406 BC029619	29257	+	TSC_hg19_v1_chr12_+_51158275 AK299240	29637	+	NM_182559 BC035123 BC048112 CU690554	108102	+	BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##AK091597|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##NM_173602|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_005171|ATF1|466|activating transcription factor 1##AK313406|ATF1|466|activating transcription factor 1##BC029619|ATF1|466|activating transcription factor 1##AK299240|ATF1|466|activating transcription factor 1##NM_182559|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC035123|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC048112|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12	0.964555	CTCF.p2:5:0.965
chr13	95272705	95272804	reg1014630.p2	8.644	+	TSC_hg19_v1_chr13_+_95254110 NM_180989 BC033906 BC052243 AK126794	-18652	+	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	-24258	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	-24325	-	X65666 X71136 AB464716 NM_007084	91564	-	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	680958	-	NM_001160100 NM_182848 AK055855	813100	+	NM_180989|GPR180|160897|G protein-coupled receptor 180##BC033906|GPR180|160897|G protein-coupled receptor 180##BC052243|GPR180|160897|G protein-coupled receptor 180##AK126794|GPR180|160897|G protein-coupled receptor 180##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase##X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10	0.883503	CTCF.p2:-7:0.734
chr2	240189241	240189396	reg1016087.p1	8.644	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	-432555	+	TSC_hg19_v1_chr2_+_239335693 AF156777	-853629	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	-853712	+	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	133330	-	TSC_hg19_v1_chr2_-_240322695 BC039904	133380	-	TSC_hg19_v1_chr2_-_240323341 AK308791	134030	-	BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)##AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AK308791|HDAC4|9759|histone deacetylase 4	0.101904	
chr11	15841350	15841458	reg1015434.p2	8.643	+	AB236158 NM_001042536	-704921	+	AB236159 NM_001031853	-707435	+	BC008428 AK291188 BC092468 NM_000728	-746278	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	582997	-	BC037866 NM_001145811	589023	-	AF309034 NM_033326	656521	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	0.0	
chr12	121021327	121021425	reg1012477.p1	8.642	+	AK223206 TSC_hg19_v1_chr12_-_121019185 AK303144 AF070660 AF117232 AJ306296 BC012505 NM_015918 NM_198202	-2188	-	AK094011 AK097807 TSC_hg19_v1_chr12_+_120972158 AK126274 AK301608 AB027196 BC016622 BC031596 BC101709 BC101715 BC143493 BT006974 CU677651 D87451 DQ890634 DQ893805	-48876	+	TSC_hg19_v1_chr12_+_120972153 NM_014868 AK315558	-49248	+	BC030201 NM_001033677	57045	+	AF169148 AF169149 NM_004276 NM_031205	66994	+	TSC_hg19_v1_chr12_+_121124951 NM_014730	103562	+	AK223206|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK303144|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF070660|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF117232|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AJ306296|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##BC012505|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015918|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_198202|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK094011|RNF10|9921|ring finger protein 10##AK097807|RNF10|9921|ring finger protein 10##AK126274|RNF10|9921|ring finger protein 10##AK301608|RNF10|9921|ring finger protein 10##AB027196|RNF10|9921|ring finger protein 10##BC016622|RNF10|9921|ring finger protein 10##BC031596|RNF10|9921|ring finger protein 10##BC101709|RNF10|9921|ring finger protein 10##BC101715|RNF10|9921|ring finger protein 10##BC143493|RNF10|9921|ring finger protein 10##BT006974|RNF10|9921|ring finger protein 10##D87451|RNF10|9921|ring finger protein 10##DQ890634|RNF10|9921|ring finger protein 10##DQ893805|RNF10|9921|ring finger protein 10##NM_014868|RNF10|9921|ring finger protein 10##AK315558|RNF10|9921|ring finger protein 10##BC030201|CABP1|9478|calcium binding protein 1##NM_001033677|CABP1|9478|calcium binding protein 1##AF169148|CABP1|9478|calcium binding protein 1##AF169149|CABP1|9478|calcium binding protein 1##NM_004276|CABP1|9478|calcium binding protein 1##NM_031205|CABP1|9478|calcium binding protein 1##NM_014730|MLEC|9761|malectin	0.997619	CTCF.p2:0:0.998
chr19	38932421	38932488	reg1016020.p2	8.642	+	TSC_hg19_v1_chr19_+_38924330 NM_000540 NM_001042723 J05200	-8110	+	AF448437 BC146669 BC150202 BC142721 BC151216 TSC_hg19_v1_chr19_-_38916860 AX721071 AY048119 AY048120 AY048121 FJ768677 FJ768678 FJ768679 FJ768680 FJ768681 FJ768682 NM_001146202 NM_001146203 NM_001146204 NM_001146205 NM_001146206 NM_001146207 NM_170604	-15582	-	TSC_hg19_v1_chr19_+_38893839 BC080606 AK128745	-38553	+	AB527182 TSC_hg19_v1_chr19_-_39108593 NM_001042600 NM_007181	176134	-	TSC_hg19_v1_chr19_+_39109725 NM_013234 AF077051 AF085358 AB019392 AY245432	177259	+	TSC_hg19_v1_chr19_+_39109825 BC007559 AK298635	177362	+	NM_000540|RYR1|6261|ryanodine receptor 1 (skeletal)##NM_001042723|RYR1|6261|ryanodine receptor 1 (skeletal)##J05200|RYR1|6261|ryanodine receptor 1 (skeletal)##AF448437|RASGRP4|115727|RAS guanyl releasing protein 4##BC146669|RASGRP4|115727|RAS guanyl releasing protein 4##BC150202|RASGRP4|115727|RAS guanyl releasing protein 4##BC142721|RASGRP4|115727|RAS guanyl releasing protein 4##BC151216|RASGRP4|115727|RAS guanyl releasing protein 4##AY048119|RASGRP4|115727|RAS guanyl releasing protein 4##AY048120|RASGRP4|115727|RAS guanyl releasing protein 4##AY048121|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768677|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768678|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768679|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768680|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768681|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768682|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146202|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146203|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146204|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146205|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146206|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146207|RASGRP4|115727|RAS guanyl releasing protein 4##NM_170604|RASGRP4|115727|RAS guanyl releasing protein 4##BC080606|FAM98C|147965|family with sequence similarity 98, member C##AK128745|FAM98C|147965|family with sequence similarity 98, member C##NM_001042600|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_007181|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_013234|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF077051|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF085358|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AB019392|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AY245432|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##BC007559|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK298635|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K	0.352813	CTCF.p2:31:0.353
chr7	134855543	134855688	reg1014801.p1	8.642	+	TSC_hg19_v1_chr7_-_134855533 NM_001243749 NM_001243751 NM_001243754 NM_024033	-61	-	TSC_hg19_v1_chr7_-_134855449 AK026103 BC000168 BC050676 BC067350	-196	-	TSC_hg19_v1_chr7_-_134855252 NM_001243752	-348	-	AL136940 TSC_hg19_v1_chr7_-_134896200	40579	-	BC063394 AB527237 AM393209 CU677881 BC017246 TSC_hg19_v1_chr7_-_134896256	40638	-	TSC_hg19_v1_chr7_-_134896267 AF161534 AK022935	40647	-	NM_001243749|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243751|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243754|C7orf49|78996|chromosome 7 open reading frame 49##NM_024033|C7orf49|78996|chromosome 7 open reading frame 49##AK026103|C7orf49|78996|chromosome 7 open reading frame 49##BC000168|C7orf49|78996|chromosome 7 open reading frame 49##BC067350|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243752|C7orf49|78996|chromosome 7 open reading frame 49##AL136940|WDR91|29062|WD repeat domain 91##BC063394|WDR91|29062|WD repeat domain 91##AM393209|WDR91|29062|WD repeat domain 91##BC017246|WDR91|29062|WD repeat domain 91##AF161534|WDR91|29062|WD repeat domain 91##AK022935|WDR91|29062|WD repeat domain 91	0.735873	CTCF.p2:6:0.736
chr10	100185591	100185729	reg1015995.p2	8.641	+	CU675263 DQ893418 DQ896787 AK075265 TSC_hg19_v1_chr10_-_100174919 AK225637 AK074429 BC006131 AK295699 NM_032709	-10726	-	TSC_hg19_v1_chr10_-_100027952 AK172781 BC013153 BC035470 NM_032211	-157668	-	TSC_hg19_v1_chr10_+_99894427 AF525304 BC047908 BC098175 BC098268 BC098359 BC099848	-291225	+	BC002514 TSC_hg19_v1_chr10_-_100206650	20986	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	21015	-	TSC_hg19_v1_chr10_-_100206705 NM_000195 NM_182639	21051	-	DQ893418|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##DQ896787|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK075265|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK225637|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK074429|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##BC006131|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK295699|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##NM_032709|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK172781|LOXL4|84171|lysyl oxidase-like 4##BC013153|LOXL4|84171|lysyl oxidase-like 4##BC035470|LOXL4|84171|lysyl oxidase-like 4##NM_032211|LOXL4|84171|lysyl oxidase-like 4##AF525304|C10orf28|27291|chromosome 10 open reading frame 28##BC047908|C10orf28|27291|chromosome 10 open reading frame 28##BC098175|C10orf28|27291|chromosome 10 open reading frame 28##BC098268|C10orf28|27291|chromosome 10 open reading frame 28##BC098359|C10orf28|27291|chromosome 10 open reading frame 28##BC099848|C10orf28|27291|chromosome 10 open reading frame 28##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_000195|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_182639|HPS1|3257|Hermansky-Pudlak syndrome 1	0.940629	CTCF.p2:-19:0.941
chr9	13427671	13427811	reg1015082.p2	8.641	+	AB210041 TSC_hg19_v1_chr9_-_13279602	-148159	-	AB384682 AF093419 BC140793 BC144564 NM_003829	-177403	-	HQ257895 TSC_hg19_v1_chr9_+_12775847	-651960	+	BX537698 TSC_hg19_v1_chr9_-_14087002	659211	-	BT007266 AB587464 DQ891097 DQ894279 EU832141 EU832234 TSC_hg19_v1_chr9_-_14313648 AK290603 BC001283 U85193	885872	-	TSC_hg19_v1_chr9_-_14313900 AK299605	886162	-	AB210041|MPDZ|8777|multiple PDZ domain protein##AF093419|MPDZ|8777|multiple PDZ domain protein##BC140793|MPDZ|8777|multiple PDZ domain protein##BC144564|MPDZ|8777|multiple PDZ domain protein##NM_003829|MPDZ|8777|multiple PDZ domain protein##HQ257895|C9orf150|286343|chromosome 9 open reading frame 150##BX537698|NFIB|4781|nuclear factor I/B##BT007266|NFIB|4781|nuclear factor I/B##DQ891097|NFIB|4781|nuclear factor I/B##DQ894279|NFIB|4781|nuclear factor I/B##EU832141|NFIB|4781|nuclear factor I/B##EU832234|NFIB|4781|nuclear factor I/B##AK290603|NFIB|4781|nuclear factor I/B##BC001283|NFIB|4781|nuclear factor I/B##U85193|NFIB|4781|nuclear factor I/B##AK299605|NFIB|4781|nuclear factor I/B	0.989778	CTCF.p2:-24:0.990
chrX	16230644	16230764	reg1016353.p1	8.641	+	NM_005314	-89281	+	TSC_hg19_v1_chrX_-_15873104 NM_003916	-357601	-	AK130075 TSC_hg19_v1_chrX_-_15872938	-357766	-	L13220 NM_004057 X65869 BC112174	437593	+	AK125332 NM_001144002	499635	-	TSC_hg19_v1_chrX_-_16730802 NM_175859 BC034986 AK125348 AF226667 AK024070 AK023549 NM_019857	500159	-	NM_005314|GRPR|2925|gastrin-releasing peptide receptor##NM_003916|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##L13220|S100G|795|S100 calcium binding protein G##NM_004057|S100G|795|S100 calcium binding protein G##X65869|S100G|795|S100 calcium binding protein G##BC112174|S100G|795|S100 calcium binding protein G##AK125332|CTPS2|56474|CTP synthase II##NM_001144002|CTPS2|56474|CTP synthase II##NM_175859|CTPS2|56474|CTP synthase II##BC034986|CTPS2|56474|CTP synthase II##AK125348|CTPS2|56474|CTP synthase II##AF226667|CTPS2|56474|CTP synthase II##AK024070|CTPS2|56474|CTP synthase II##AK023549|CTPS2|56474|CTP synthase II##NM_019857|CTPS2|56474|CTP synthase II	0.053845	
chr1	76457325	76457502	reg1014729.p1	8.640	+	AF403035 CU691378 BC022517 AF429968 BC036573 AK098606 NM_080868	-59368	-	NM_002440 BC033030 U89293 AF104243 AB528458 CU689598 DQ891259 DQ894445	-194801	+	AK293057 AK128861 BC020790 NM_004582 TSC_hg19_v1_chr1_+_76251940	-205500	+	TSC_hg19_v1_chr1_+_76540430 NM_001160011 NM_152996 AK091215 AX746855 BC059363 AK297363 AY358540 AJ507291 CU691350	83049	+	TSC_hg19_v1_chr1_+_77165439 D28460	708027	+	TSC_hg19_v1_chr1_+_77333125 AK056241	875714	+	AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17##AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17##AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_002440|MSH4|4438|mutS homolog 4 (E. coli)##BC033030|MSH4|4438|mutS homolog 4 (E. coli)##U89293|MSH4|4438|mutS homolog 4 (E. coli)##AF104243|MSH4|4438|mutS homolog 4 (E. coli)##DQ891259|MSH4|4438|mutS homolog 4 (E. coli)##DQ894445|MSH4|4438|mutS homolog 4 (E. coli)##AK293057|RABGGTB|5876|Rab geranylgeranyltransferase, beta subunit##AK128861|RABGGTB|5876|Rab geranylgeranyltransferase, beta subunit##BC020790|RABGGTB|5876|Rab geranylgeranyltransferase, beta subunit##NM_004582|RABGGTB|5876|Rab geranylgeranyltransferase, beta subunit##NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##D28460|TPI1|7167|triosephosphate isomerase 1##AK056241|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	0.99847	CTCF.p2:-23:0.998
chr4	1066769	1066910	reg1017843.p1	8.640	+	AJ277437 NM_021923 AB385230 DQ892417 DQ895631 AK225486	-60574	+	AF312678 AY358303 NM_001004356 AF279689 NM_001004358	-61155	+	TSC_hg19_v1_chr4_+_1005410 AK172829	-61436	+	BC101258 BC101259 BC101260 BC101261 BC036250 AK310043 BC050356 AK096160 NM_001131034 NM_001193318 NM_194439	40493	-	TSC_hg19_v1_chr4_-_1166372 AK130164	99530	-	TSC_hg19_v1_chr4_-_1166378 BC002707	99549	-	AJ277437|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_021923|FGFRL1|53834|fibroblast growth factor receptor-like 1##DQ892417|FGFRL1|53834|fibroblast growth factor receptor-like 1##DQ895631|FGFRL1|53834|fibroblast growth factor receptor-like 1##AK225486|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF312678|FGFRL1|53834|fibroblast growth factor receptor-like 1##AY358303|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004356|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF279689|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004358|FGFRL1|53834|fibroblast growth factor receptor-like 1##AK172829|FGFRL1|53834|fibroblast growth factor receptor-like 1##BC101258|RNF212|285498|ring finger protein 212##BC101259|RNF212|285498|ring finger protein 212##BC101260|RNF212|285498|ring finger protein 212##BC101261|RNF212|285498|ring finger protein 212##BC036250|RNF212|285498|ring finger protein 212##AK310043|RNF212|285498|ring finger protein 212##BC050356|RNF212|285498|ring finger protein 212##AK096160|RNF212|285498|ring finger protein 212##NM_001131034|RNF212|285498|ring finger protein 212##NM_001193318|RNF212|285498|ring finger protein 212##NM_194439|RNF212|285498|ring finger protein 212##AK130164|SPON2|10417|spondin 2, extracellular matrix protein##BC002707|SPON2|10417|spondin 2, extracellular matrix protein	0.0	
chr4	95517164	95517284	reg1014549.p1	8.640	+	BC026029 AM393306 AM393394 AM393485 AM393621 AM393813 DQ890686 DQ893868 AB587372 CU676108 CU679071 AY598328 BT007328 TSC_hg19_v1_chr4_+_95376500	-140774	+	TSC_hg19_v1_chr4_+_95373092 BC017902 BC008741 AK291898 AK291624 AK304125 AK296980 AL832157 AL832686 AF061258 AL833151 AL833438	-144128	+	TSC_hg19_v1_chr4_+_95373030 AY345240 NM_001011513 NM_001011515 NM_001011516 NM_006457	-144202	+	TSC_hg19_v1_chr4_+_95679109 NM_001203 U89326	161882	+	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	952955	-	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	953152	-	BC026029|PDLIM5|10611|PDZ and LIM domain 5##AM393306|PDLIM5|10611|PDZ and LIM domain 5##AM393394|PDLIM5|10611|PDZ and LIM domain 5##AM393485|PDLIM5|10611|PDZ and LIM domain 5##AM393621|PDLIM5|10611|PDZ and LIM domain 5##AM393813|PDLIM5|10611|PDZ and LIM domain 5##DQ890686|PDLIM5|10611|PDZ and LIM domain 5##DQ893868|PDLIM5|10611|PDZ and LIM domain 5##AY598328|PDLIM5|10611|PDZ and LIM domain 5##BT007328|PDLIM5|10611|PDZ and LIM domain 5##BC017902|PDLIM5|10611|PDZ and LIM domain 5##BC008741|PDLIM5|10611|PDZ and LIM domain 5##AK291898|PDLIM5|10611|PDZ and LIM domain 5##AK291624|PDLIM5|10611|PDZ and LIM domain 5##AK304125|PDLIM5|10611|PDZ and LIM domain 5##AK296980|PDLIM5|10611|PDZ and LIM domain 5##AL832157|PDLIM5|10611|PDZ and LIM domain 5##AL832686|PDLIM5|10611|PDZ and LIM domain 5##AF061258|PDLIM5|10611|PDZ and LIM domain 5##AL833151|PDLIM5|10611|PDZ and LIM domain 5##AL833438|PDLIM5|10611|PDZ and LIM domain 5##AY345240|PDLIM5|10611|PDZ and LIM domain 5##NM_001011513|PDLIM5|10611|PDZ and LIM domain 5##NM_001011515|PDLIM5|10611|PDZ and LIM domain 5##NM_001011516|PDLIM5|10611|PDZ and LIM domain 5##NM_006457|PDLIM5|10611|PDZ and LIM domain 5##NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB##U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)	0.151122	
chr6_ssto_hap7	2495379	2495497	reg1017209.p1	8.640	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.998737	CTCF.p2:5:0.999
chr1	226388877	226388989	reg1013990.p1	8.639	+	AY150218 TSC_hg19_v1_chr1_-_226374401 BC045533 BC060792 NM_022735 AK025520 AK314468 AB043587	-14516	-	BC039575 TSC_hg19_v1_chr1_-_226374400	-14533	-	TSC_hg19_v1_chr1_+_226271319 BC032899	-117573	+	BC111974 BC113441 BC143784 TSC_hg19_v1_chr1_+_226411364 AF211891 NM_031944	22417	+	TSC_hg19_v1_chr1_-_226496839 AY786184 BC043444 BX537869 AK126177 AF190323 AF190324 AK308823	107963	-	BC045625 NM_173083	108264	-	AY150218|ACBD3|64746|acyl-CoA binding domain containing 3##BC045533|ACBD3|64746|acyl-CoA binding domain containing 3##BC060792|ACBD3|64746|acyl-CoA binding domain containing 3##NM_022735|ACBD3|64746|acyl-CoA binding domain containing 3##AK025520|ACBD3|64746|acyl-CoA binding domain containing 3##AK314468|ACBD3|64746|acyl-CoA binding domain containing 3##AB043587|ACBD3|64746|acyl-CoA binding domain containing 3##BC039575|ACBD3|64746|acyl-CoA binding domain containing 3##BC111974|MIXL1|83881|Mix paired-like homeobox##BC113441|MIXL1|83881|Mix paired-like homeobox##BC143784|MIXL1|83881|Mix paired-like homeobox##AF211891|MIXL1|83881|Mix paired-like homeobox##NM_031944|MIXL1|83881|Mix paired-like homeobox##AY786184|LIN9|286826|lin-9 homolog (C. elegans)##BC043444|LIN9|286826|lin-9 homolog (C. elegans)##BX537869|LIN9|286826|lin-9 homolog (C. elegans)##AK126177|LIN9|286826|lin-9 homolog (C. elegans)##AF190323|LIN9|286826|lin-9 homolog (C. elegans)##AF190324|LIN9|286826|lin-9 homolog (C. elegans)##AK308823|LIN9|286826|lin-9 homolog (C. elegans)##BC045625|LIN9|286826|lin-9 homolog (C. elegans)##NM_173083|LIN9|286826|lin-9 homolog (C. elegans)	0.320231	CTCF.p2:-6:0.320
chr2	23535999	23536129	reg1016568.p1	8.639	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2269135	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-2269165	-	TSC_hg19_v1_chr2_-_21266818 AB587530 HM487065 M14081 M14162 BC051278	-2269243	-	NM_052920	72233	+	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	613882	-	TSC_hg19_v1_chr2_+_24150144 BC037901	614093	+	AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##HM487065|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14081|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14162|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC051278|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A	0.384671	CTCF.p2:-78:0.385
chr5	173008804	173008920	reg1013704.p2	8.638	+	AK095891 NM_003714	-252357	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	-253419	-	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	-253600	-	BC003114 TSC_hg19_v1_chr5_-_173043602	34735	-	TSC_hg19_v1_chr5_-_173043624 AK301982	34766	-	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	34811	-	AK095891|STC2|8614|stanniocalcin 2##NM_003714|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1	0.998516	CTCF.p2:-17:0.999
chr9	119835932	119836083	reg1014749.p1	8.638	+	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	-386401	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	-386545	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	-919937	+	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	341306	-	TSC_hg19_v1_chr9_-_120177336 BX649176	341327	-	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	630457	+	NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2##BX649176|ASTN2|23245|astrotactin 2##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4	0.527524	CTCF.p2:-9:0.528
chr2	101655199	101655337	reg1014033.p1	8.637	+	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	-36546	+	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	-218502	+	TSC_hg19_v1_chr2_+_101179454 NM_024065 BC001021 AK300827 AF110511 AF267853	-475832	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	112515	-	TSC_hg19_v1_chr2_+_101869347 NM_017546	214069	+	TSC_hg19_v1_chr2_+_101869378 AF103798 BC064421 BC018664	214124	+	NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_024065|PDCL3|79031|phosducin-like 3##BC001021|PDCL3|79031|phosducin-like 3##AK300827|PDCL3|79031|phosducin-like 3##AF110511|PDCL3|79031|phosducin-like 3##AF267853|PDCL3|79031|phosducin-like 3##AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_017546|C2orf29|55571|chromosome 2 open reading frame 29##AF103798|C2orf29|55571|chromosome 2 open reading frame 29##BC064421|C2orf29|55571|chromosome 2 open reading frame 29##BC018664|C2orf29|55571|chromosome 2 open reading frame 29	0.0	
chr5	26701028	26701129	reg1016080.p1	8.637	+	NM_006727	-2055994	-	DQ388610 NM_020227 AK301776	-3193335	+	L33477 NM_004061	-3847348	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	337593	-	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	771325	+	NM_004932 TSC_hg19_v1_chr5_+_31193792 AK291290	4492718	+	NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401##NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	0.217364	CTCF.p2:-4:0.217
chr7	147962183	147962298	reg1014319.p1	8.637	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-2148356	+	NM_014141	-2148788	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-3429104	-	TSC_hg19_v1_chr7_+_148036552 CR933671	74325	+	BC021251 NM_145304	325416	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	433700	+	AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##CR933671|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1	0.182889	
chr9	1709462	1709579	reg1015090.p2	8.636	+	AF130729 NM_181872	-658911	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-659150	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-659176	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	305776	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	912287	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	912554	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.0	
chr1	150159619	150159783	reg1015204.p1	8.635	+	TSC_hg19_v1_chr1_+_150122415 AB464030 AK222921 CU679641 DQ893381 DQ896780 AF073836	-37263	+	TSC_hg19_v1_chr1_+_150122268 AF217956 AF168676 BC010149	-37397	+	TSC_hg19_v1_chr1_+_150122120 AK302255 AF192912 AF291105 NM_016274	-37569	+	AK095228 NM_001136479	47324	-	AB528764 AM393076 AL833660 TSC_hg19_v1_chr1_-_150208332 AK303333 BC003380 AL832664 AK303392 AK223469	48566	-	AY057381 TSC_hg19_v1_chr1_-_150208461 AK092672 AX747663	48750	-	AK222921|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ893381|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ896780|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF073836|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF217956|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF168676|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##BC010149|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AK302255|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF192912|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF291105|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##NM_016274|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AK095228|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##NM_001136479|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AM393076|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL833660|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303333|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##BC003380|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL832664|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303392|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK223469|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AY057381|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK092672|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	0.993941	CTCF.p2:44:0.994
chr15	67725954	67726087	reg1016147.p1	8.635	+	TSC_hg19_v1_chr15_+_67547171 BC039463 NM_001031715 NM_022784 AY014282 AK292478 AK304303 BC031041 BC048964 BC039292 AK022538 CU690588	-178846	+	AB528136 AM393020 AM393411 CR533540 CU691322 TSC_hg19_v1_chr15_-_67547000 AK021568 AL136715 BC058886 BC047026 BC035852 NM_024666	-179000	-	NM_001145104 AK300614 AK301348	-267524	+	TSC_hg19_v1_chr15_+_67813533 NM_001143936 AK294012 AY726587	87527	+	TSC_hg19_v1_chr15_-_67814131 BC047537	88136	-	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	109002	+	BC039463|IQCH|64799|IQ motif containing H##NM_001031715|IQCH|64799|IQ motif containing H##NM_022784|IQCH|64799|IQ motif containing H##AY014282|IQCH|64799|IQ motif containing H##AK292478|IQCH|64799|IQ motif containing H##AK304303|IQCH|64799|IQ motif containing H##BC031041|IQCH|64799|IQ motif containing H##BC048964|IQCH|64799|IQ motif containing H##BC039292|IQCH|64799|IQ motif containing H##AK022538|IQCH|64799|IQ motif containing H##AM393020|AAGAB|79719|alpha- and gamma-adaptin binding protein##AM393411|AAGAB|79719|alpha- and gamma-adaptin binding protein##CR533540|AAGAB|79719|alpha- and gamma-adaptin binding protein##AK021568|AAGAB|79719|alpha- and gamma-adaptin binding protein##AL136715|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC058886|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC047026|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC035852|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_024666|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3##NM_001143936|C15orf61|145853|chromosome 15 open reading frame 61##AK294012|C15orf61|145853|chromosome 15 open reading frame 61##AY726587|C15orf61|145853|chromosome 15 open reading frame 61##BC047537|LOC100506686|100506686|uncharacterized LOC100506686##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5	0.062352	
chr1	85402009	85402149	reg1016174.p1	8.635	+	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	-43193	-	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-246003	-	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-361973	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	60629	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	112066	-	TSC_hg19_v1_chr1_-_85514184 BX647497 AK314354 NM_001253693 NM_018298	112119	-	AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3##BX647497|MCOLN3|55283|mucolipin 3##AK314354|MCOLN3|55283|mucolipin 3##NM_001253693|MCOLN3|55283|mucolipin 3##NM_018298|MCOLN3|55283|mucolipin 3	0.994918	CTCF.p2:13:0.995
chr19	56143873	56143987	reg1011711.p2	8.635	+	TSC_hg19_v1_chr19_-_56135944 BC065822 NM_203374	-7968	-	AK074859 AK309967 TSC_hg19_v1_chr19_-_56135933	-7998	-	NM_001195605	-18972	+	TSC_hg19_v1_chr19_+_56146387 AK055093	2462	+	TSC_hg19_v1_chr19_+_56152397 AL359054 NM_207115 AK314888	8467	+	NM_016202 NM_001163423	9509	+	BC065822|ZNF784|147808|zinc finger protein 784##NM_203374|ZNF784|147808|zinc finger protein 784##AK074859|ZNF784|147808|zinc finger protein 784##NM_001195605|ZNF865|100507290|zinc finger protein 865##AL359054|ZNF580|51157|zinc finger protein 580##NM_207115|ZNF580|51157|zinc finger protein 580##AK314888|ZNF580|51157|zinc finger protein 580##NM_016202|ZNF580|51157|zinc finger protein 580##NM_001163423|ZNF580|51157|zinc finger protein 580	0.998326	CTCF.p2:-5:0.998
chr2	108532700	108532812	reg1016082.p1	8.635	+	NM_182588 TSC_hg19_v1_chr2_+_108443399	-89362	+	TSC_hg19_v1_chr2_-_107503517 AX795200 AB059555 BC008680 AK307784 NM_001142352 NM_032528 FJ433883	-1029210	-	TSC_hg19_v1_chr2_-_107503063 FJ433884	-1029694	-	AK315280 AB084377 AK300801 AB043997 NM_021815 BC111525 BC111524	70246	+	AB528243 NM_001008743	330894	+	AF186252 AF186255 NM_001056 NM_176825 AF186251 AF186254 AK297086 AK313193 AK298306 U66036 AF186253 AF186256 AB008164 AF026303 BC005353	372529	+	NM_182588|RGPD4|285190|RANBP2-like and GRIP domain containing 4##AB059555|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##BC008680|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##AK307784|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142352|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_032528|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##AK315280|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB084377|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AK300801|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB043997|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_021815|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111525|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111524|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3##AF186252|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186255|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001056|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_176825|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186251|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186254|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK297086|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK313193|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK298306|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##U66036|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186253|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186256|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AB008164|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF026303|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC005353|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2	0.986111	CTCF.p2:-3:0.986
chr17	66201488	66201663	reg1014800.p2	8.634	+	TSC_hg19_v1_chr17_+_66097706 BC045718	-103877	+	TSC_hg19_v1_chr17_+_66031889 BC034443	-169687	+	TSC_hg19_v1_chr17_+_66031850 NM_002266 U09559 U28386 AK024833 AK058111 AK291954 BC005978 BC013257 BC053343 BC146905	-169735	+	NM_001033569 NM_001033570 NM_001033571 NM_001033572 NM_001033574 NM_016627 TSC_hg19_v1_chr17_+_66244216 BC056271 BC050709	42605	+	TSC_hg19_v1_chr17_+_66244233 AF208856	42668	+	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	53759	+	BC045718|LOC100499466|100499466|uncharacterized LOC100499466##BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##NM_001033569|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033570|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033571|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033572|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033574|AMZ2|51321|archaelysin family metallopeptidase 2##NM_016627|AMZ2|51321|archaelysin family metallopeptidase 2##BC056271|AMZ2|51321|archaelysin family metallopeptidase 2##BC050709|AMZ2|51321|archaelysin family metallopeptidase 2##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G	0.4741	CTCF.p2:-19:0.474
chr1	86939859	86939954	reg1015250.p2	8.634	+	NM_001285 TSC_hg19_v1_chr1_+_86934607 AK314375 AK291999 AK097057 AF127036	-5319	+	NM_006536 AF043977 AK296719 AK290348 AK307937 BC041096 AB026833 AF127980	-50057	+	BC091490 TSC_hg19_v1_chr1_-_86862004 AB033055 BC047368 BC009779 BC012579 AK308351 AK302792 BC026105 AK303209 NM_001007022 NM_001184765 NM_001184766 NM_020729	-77931	-	NM_012128 AK000072 AK314430 BC113687 BC113689 AF127035 AY358470 HQ258531 AK307785 AK307898 AK293766	72935	+	TSC_hg19_v1_chr1_+_87170254 NM_001206651 NM_001206652 NM_001206653 NM_016009	230345	+	TSC_hg19_v1_chr1_+_87170289 AK303710 AB007960 AK225864 AK001954	230472	+	NM_001285|CLCA1|1179|chloride channel accessory 1##AK314375|CLCA1|1179|chloride channel accessory 1##AK291999|CLCA1|1179|chloride channel accessory 1##AK097057|CLCA1|1179|chloride channel accessory 1##AF127036|CLCA1|1179|chloride channel accessory 1##NM_006536|CLCA2|9635|chloride channel accessory 2##AF043977|CLCA2|9635|chloride channel accessory 2##AK290348|CLCA2|9635|chloride channel accessory 2##AK307937|CLCA2|9635|chloride channel accessory 2##BC041096|CLCA2|9635|chloride channel accessory 2##AB026833|CLCA2|9635|chloride channel accessory 2##AF127980|CLCA2|9635|chloride channel accessory 2##BC091490|ODF2L|57489|outer dense fiber of sperm tails 2-like##AB033055|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC047368|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC009779|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC012579|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK308351|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK302792|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC026105|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK303209|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001007022|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184765|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184766|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_020729|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_012128|CLCA4|22802|chloride channel accessory 4##AK000072|CLCA4|22802|chloride channel accessory 4##AK314430|CLCA4|22802|chloride channel accessory 4##BC113687|CLCA4|22802|chloride channel accessory 4##BC113689|CLCA4|22802|chloride channel accessory 4##AF127035|CLCA4|22802|chloride channel accessory 4##AY358470|CLCA4|22802|chloride channel accessory 4##HQ258531|CLCA4|22802|chloride channel accessory 4##AK307785|CLCA4|22802|chloride channel accessory 4##AK307898|CLCA4|22802|chloride channel accessory 4##AK293766|CLCA4|22802|chloride channel accessory 4##NM_001206651|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_001206652|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_001206653|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK303710|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AB007960|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK225864|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK001954|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	0.813718	CTCF.p2:12:0.814
chr16	68936428	68936560	reg1013876.p1	8.633	+	TSC_hg19_v1_chr16_+_68877504 BC092500 AB051533 NM_024562 AB463318	-58989	+	TSC_hg19_v1_chr16_+_68771304 Z18923	-165183	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	-165249	+	AK291400 NM_001199280	202972	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	203646	+	AF234839 NM_005329	204948	+	BC092500|TMCO7|79613|transmembrane and coiled-coil domains 7##AB051533|TMCO7|79613|transmembrane and coiled-coil domains 7##NM_024562|TMCO7|79613|transmembrane and coiled-coil domains 7##Z18923|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3##AF234839|HAS3|3038|hyaluronan synthase 3##NM_005329|HAS3|3038|hyaluronan synthase 3	0.543921	CTCF.p2:-11:0.544
chr4	166458324	166458452	reg1014513.p1	8.633	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-158231	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-209533	+	NM_001161521 NM_001161522 AK294103 BX647776	-327210	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	336066	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	1697223	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	1697316	-	X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.997753	CTCF.p2:-25:0.998
chr17	68632815	68632917	reg1015061.p1	8.632	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-467170	+	BC033038 NM_170742	-531872	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-561436	+	TSC_hg19_v1_chr17_-_70116937 AL833139	1484072	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	1484293	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	1484304	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.997125	CTCF.p2:-4:0.997
chr3	184894672	184894841	reg1015353.p2	8.632	+	TSC_hg19_v1_chr3_-_184870849 AK091454 AX746993 NM_001025266	-23958	-	TSC_hg19_v1_chr3_-_184870632 BC137178 BC137179 BC150565	-24103	-	TSC_hg19_v1_chr3_+_184529983 BC140768	-364761	+	BC038948 BC110460 L07077 AK301521 TSC_hg19_v1_chr3_-_184971838 AK223460 AK291798 BC011030 BC030982 NM_001166415 NM_001966	77094	-	TSC_hg19_v1_chr3_+_185000783 NM_001242314 NM_001242317 AK297646 BC036593 AK312714 BC015996	105993	+	AK302951 TSC_hg19_v1_chr3_+_185046682 BC031677	151935	+	NM_001025266|C3orf70|285382|chromosome 3 open reading frame 70##BC137178|C3orf70|285382|chromosome 3 open reading frame 70##BC137179|C3orf70|285382|chromosome 3 open reading frame 70##BC150565|C3orf70|285382|chromosome 3 open reading frame 70##BC140768|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001242314|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_001242317|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK297646|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC036593|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK312714|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC015996|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK302951|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC031677|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	0.989989	CTCF.p2:-11:0.990
chr12	329142	329282	reg1017650.p1	8.631	+	AK307167 AK313690 NM_001122848 NM_001206931	-5900	-	NM_003044 BC036838 BC026339 NM_001122847	-6475	-	AK091953 AX747275 NM_015232	-142671	+	AK313511 AF462445 AK295904 AK296127 AK296209 BC020867 BC022392 NM_001190997 NM_001243392 NM_016615	42804	-	AB384668 TSC_hg19_v1_chr12_-_498418 AK225060 BC110916 S66431 AK307580 AK307689	169128	-	AK316029 NM_001130147 NM_001130148 AK308216	169324	+	AK307167|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK313690|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001122848|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001206931|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_003044|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC036838|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC026339|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001122847|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK091953|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_015232|IQSEC3|440073|IQ motif and Sec7 domain 3##AK313511|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AF462445|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK295904|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK296127|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK296209|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##BC020867|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##BC022392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_001190997|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_001243392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_016615|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK225060|KDM5A|5927|lysine (K)-specific demethylase 5A##BC110916|KDM5A|5927|lysine (K)-specific demethylase 5A##S66431|KDM5A|5927|lysine (K)-specific demethylase 5A##AK307580|KDM5A|5927|lysine (K)-specific demethylase 5A##AK307689|KDM5A|5927|lysine (K)-specific demethylase 5A##AK316029|CCDC77|84318|coiled-coil domain containing 77##NM_001130147|CCDC77|84318|coiled-coil domain containing 77##NM_001130148|CCDC77|84318|coiled-coil domain containing 77##AK308216|CCDC77|84318|coiled-coil domain containing 77	1.436808	CTCF.p2:-19:0.988	CTCF.p2:65:0.368
chr6	123047852	123047945	reg1016021.p2	8.631	+	BC093027 TSC_hg19_v1_chr6_+_122931549 BC036011 AF087873 AK315151	-116318	+	NM_032471 NM_181795	-116522	+	NM_181794 CR749456 AJ420562	-254827	+	NM_001446 TSC_hg19_v1_chr6_+_123100743 BC012299	52801	+	AK311867 TSC_hg19_v1_chr6_+_123100861 AK289836 AK307272 AJ002962 AB208815 U51338 D50373 D88648 AL512688 U81235 CR457057 DQ891437 DQ894613 EU176601	53001	+	NM_006714	62072	+	BC093027|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##BC036011|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AF087873|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AK315151|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_032471|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_181795|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_181794|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AJ420562|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_001446|FABP7|2173|fatty acid binding protein 7, brain##BC012299|FABP7|2173|fatty acid binding protein 7, brain##AK311867|FABP7|2173|fatty acid binding protein 7, brain##AK289836|FABP7|2173|fatty acid binding protein 7, brain##AJ002962|FABP7|2173|fatty acid binding protein 7, brain##U51338|FABP7|2173|fatty acid binding protein 7, brain##D50373|FABP7|2173|fatty acid binding protein 7, brain##D88648|FABP7|2173|fatty acid binding protein 7, brain##AL512688|FABP7|2173|fatty acid binding protein 7, brain##U81235|FABP7|2173|fatty acid binding protein 7, brain##CR457057|FABP7|2173|fatty acid binding protein 7, brain##DQ891437|FABP7|2173|fatty acid binding protein 7, brain##DQ894613|FABP7|2173|fatty acid binding protein 7, brain##EU176601|FABP7|2173|fatty acid binding protein 7, brain##NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	0.902246	CTCF.p2:10:0.902
chr13	24896740	24896848	reg1015594.p2	8.630	+	BC040438 NM_178540 AY358145	-13077	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	-51896	+	AK299981 AK301149 TSC_hg19_v1_chr13_+_24825840	-70959	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	190117	-	AK292968 NM_001185085 NM_001676	357754	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	441525	+	BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13##AK299981|SPATA13|221178|spermatogenesis associated 13##AK301149|SPATA13|221178|spermatogenesis associated 13##BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17	0.834695	CTCF.p2:-1:0.261	CTCF.p2:31:0.467
chr15	97789113	97789241	reg1016224.p1	8.630	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	-462505	+	NM_001145157	-912609	+	AK316086 NM_001145156	-913384	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	714742	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	714774	+	AK097062 AK097062 NM_182562	1268433	-	AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B	0.0	
chr16	62075456	62075572	reg1015372.p2	8.630	+	AK124734 NM_001796	-4776	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-3307317	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-3356858	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	3080388	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	3080454	-	TSC_hg19_v1_chr16_-_65155987 AK297377	3080480	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.324575	CTCF.p2:1:0.325
chr17	27864126	27864244	reg1014487.p1	8.630	+	NM_020791 NM_025142 BC133039 BC144067	-146240	+	TSC_hg19_v1_chr17_-_27621167 AK293075 NM_020772	-243020	-	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	-243075	-	TSC_hg19_v1_chr17_-_27893539 AK056717	29359	-	TSC_hg19_v1_chr17_-_27894056 BC012476 NM_198147 AY358212	29839	-	TSC_hg19_v1_chr17_+_27895730 AB110209 AK075341	31522	+	NM_020791|TAOK1|57551|TAO kinase 1##NM_025142|TAOK1|57551|TAO kinase 1##BC133039|TAOK1|57551|TAO kinase 1##BC144067|TAOK1|57551|TAO kinase 1##AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK056717|ABHD15|116236|abhydrolase domain containing 15##BC012476|ABHD15|116236|abhydrolase domain containing 15##NM_198147|ABHD15|116236|abhydrolase domain containing 15##AY358212|ABHD15|116236|abhydrolase domain containing 15##AB110209|TP53I13|90313|tumor protein p53 inducible protein 13##AK075341|TP53I13|90313|tumor protein p53 inducible protein 13	0.993383	CTCF.p2:-10:0.993
chr2	111611251	111611378	reg1014741.p1	8.630	+	AK300513 NM_001142807 BC022268	-121135	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-175492	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-175671	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	267173	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	1030312	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	1030447	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.212736	CTCF.p2:-21:0.213
chr9	104074088	104074220	reg1017554.p1	8.630	+	AK000307 AK225306 BC029380 NM_017753 TSC_hg19_v1_chr9_+_103947336	-126828	+	NM_207299 AK303807 TSC_hg19_v1_chr9_+_103791087	-283088	+	NM_001018116 AK300099 TSC_hg19_v1_chr9_+_103340380 EU487253 BC090888	-733765	+	NM_001127610 AK315347	71668	-	L34081 BC039200 BC009567 NM_001701 BC107424	73121	-	TSC_hg19_v1_chr9_-_104160901 BC032008 AK295521 AK000500 AK025643 NM_019051	86743	-	AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_207299|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK303807|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_001018116|MURC|347273|muscle-related coiled-coil protein##AK300099|MURC|347273|muscle-related coiled-coil protein##EU487253|MURC|347273|muscle-related coiled-coil protein##BC090888|MURC|347273|muscle-related coiled-coil protein##NM_001127610|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##AK315347|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##L34081|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC039200|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC009567|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##NM_001701|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC107424|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC032008|MRPL50|54534|mitochondrial ribosomal protein L50##AK000500|MRPL50|54534|mitochondrial ribosomal protein L50##NM_019051|MRPL50|54534|mitochondrial ribosomal protein L50	0.998393	CTCF.p2:1:0.998
chr11	103798404	103798522	reg1014731.p1	8.629	+	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	-818264	+	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	-835540	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	-835722	-	NM_001001711 AF429971 AK093336 AX748060 BC022018 BC022017 BC021710 BC021172	108875	+	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	236331	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	236577	-	AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_001001711|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AF429971|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK093336|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022018|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022017|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021710|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021172|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D	0.0	
chr2	159704958	159705098	reg1015262.p1	8.629	+	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	-53193	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-391445	+	TSC_hg19_v1_chr2_+_159313419 BC034473	-391593	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	120119	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	438120	-	AK127551 BC107570 TSC_hg19_v1_chr2_-_160472070	766986	-	AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##BC034473|PKP4|8502|plakophilin 4##BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	1.115574	CTCF.p2:-46:0.740	CTCF.p2:56:0.375
chr1	153545113	153545243	reg1015118.p1	8.628	+	BC002829 NM_005978	-6873	-	BC012893 NM_002960 Z18948	-23453	-	BC000838 BC024974 AK292083 BC016300 NM_002961 NM_019554 TSC_hg19_v1_chr1_-_153518283	-26904	-	BC095462 U92985 TSC_hg19_v1_chr1_-_153581484 AK290804	36287	-	TSC_hg19_v1_chr1_-_153585546 BC010541 NM_080388 AY221961 BC019099 AY762098	40386	-	AY007220 TSC_hg19_v1_chr1_-_153588799 NM_020672	43620	-	BC002829|S100A2|6273|S100 calcium binding protein A2##NM_005978|S100A2|6273|S100 calcium binding protein A2##BC012893|S100A3|6274|S100 calcium binding protein A3##NM_002960|S100A3|6274|S100 calcium binding protein A3##Z18948|S100A3|6274|S100 calcium binding protein A3##BC000838|S100A4|6275|S100 calcium binding protein A4##BC024974|S100A4|6275|S100 calcium binding protein A4##AK292083|S100A4|6275|S100 calcium binding protein A4##BC016300|S100A4|6275|S100 calcium binding protein A4##NM_002961|S100A4|6275|S100 calcium binding protein A4##NM_019554|S100A4|6275|S100 calcium binding protein A4##BC095462|S100A16|140576|S100 calcium binding protein A16##U92985|S100A16|140576|S100 calcium binding protein A16##AK290804|S100A16|140576|S100 calcium binding protein A16##BC010541|S100A16|140576|S100 calcium binding protein A16##NM_080388|S100A16|140576|S100 calcium binding protein A16##AY221961|S100A16|140576|S100 calcium binding protein A16##BC019099|S100A16|140576|S100 calcium binding protein A16##AY762098|S100A16|140576|S100 calcium binding protein A16##AY007220|S100A14|57402|S100 calcium binding protein A14##NM_020672|S100A14|57402|S100 calcium binding protein A14	0.0	
chr2	158608423	158608542	reg1016999.p1	8.628	+	BC022530 NM_001111032 NM_001111033 NM_145259 TSC_hg19_v1_chr2_-_158485400	-123085	-	AB590288 CU692676 DQ895570 EU176205 AF525680 AF525681 AY127050 TSC_hg19_v1_chr2_-_158485239	-123284	-	TSC_hg19_v1_chr2_-_158454049 AF525679 NM_001111031	-154407	-	BC033867 BC036748 NM_001105	123140	-	AK297765 AK313630 NM_001111067	123875	-	BC033529 NM_001135098	243208	+	BC022530|ACVR1C|130399|activin A receptor, type IC##NM_001111032|ACVR1C|130399|activin A receptor, type IC##NM_001111033|ACVR1C|130399|activin A receptor, type IC##NM_145259|ACVR1C|130399|activin A receptor, type IC##DQ895570|ACVR1C|130399|activin A receptor, type IC##EU176205|ACVR1C|130399|activin A receptor, type IC##AF525680|ACVR1C|130399|activin A receptor, type IC##AF525681|ACVR1C|130399|activin A receptor, type IC##AY127050|ACVR1C|130399|activin A receptor, type IC##AF525679|ACVR1C|130399|activin A receptor, type IC##NM_001111031|ACVR1C|130399|activin A receptor, type IC##BC033867|ACVR1|90|activin A receptor, type I##BC036748|ACVR1|90|activin A receptor, type I##NM_001105|ACVR1|90|activin A receptor, type I##AK297765|ACVR1|90|activin A receptor, type I##AK313630|ACVR1|90|activin A receptor, type I##NM_001111067|ACVR1|90|activin A receptor, type I##BC033529|UPP2|151531|uridine phosphorylase 2##NM_001135098|UPP2|151531|uridine phosphorylase 2	0.869238	CTCF.p2:8:0.869
chr2	160824923	160825054	reg1015357.p1	8.628	+	NM_001198759 NM_001198760 NM_002349 TSC_hg19_v1_chr2_-_160761270	-63698	-	AF064827 AY184222 AY314006 TSC_hg19_v1_chr2_-_160761248 AF011333 AK310678 BC057232	-63762	-	TSC_hg19_v1_chr2_-_160654754 AK304422 AY314007 NM_001198763 NM_001198764 NM_014880	-170232	-	BC140823 BC144631 TSC_hg19_v1_chr2_-_160919021	93991	-	U17033 U17034 NM_001007267 NM_001195641 NM_007366 TSC_hg19_v1_chr2_-_160919148	94147	-	AB463075 AM393800 M35198 NM_000888 BC121178 BC143656	231599	-	NM_001198759|LY75-CD302|100526664|LY75-CD302 readthrough##NM_001198760|LY75-CD302|100526664|LY75-CD302 readthrough##NM_002349|LY75|4065|lymphocyte antigen 75##AF064827|LY75|4065|lymphocyte antigen 75##AY184222|LY75-CD302|100526664|LY75-CD302 readthrough##AY314006|LY75-CD302|100526664|LY75-CD302 readthrough##AF011333|LY75|4065|lymphocyte antigen 75##AK310678|LY75|4065|lymphocyte antigen 75##BC057232|LY75|4065|lymphocyte antigen 75##AK304422|CD302|9936|CD302 molecule##AY314007|CD302|9936|CD302 molecule##NM_001198763|CD302|9936|CD302 molecule##NM_001198764|CD302|9936|CD302 molecule##NM_014880|CD302|9936|CD302 molecule##BC140823|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC144631|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##U17033|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##U17034|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001007267|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001195641|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_007366|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##AM393800|ITGB6|3694|integrin, beta 6##M35198|ITGB6|3694|integrin, beta 6##NM_000888|ITGB6|3694|integrin, beta 6##BC121178|ITGB6|3694|integrin, beta 6##BC143656|ITGB6|3694|integrin, beta 6	0.971281	CTCF.p2:18:0.971
chr7	31174220	31174358	reg1017260.p1	8.628	+	TSC_hg19_v1_chr7_+_31092073 NM_001118 NM_001199635 NM_001199636 NM_001199637 AK290046 AK226138	-82185	+	L01406 L09237 NM_000823 AY557192	-170630	+	AK309608 NM_001185060 AK309691 AK309688 NM_001185061 NM_001185062	-213273	+	AK055238 AF248954 NM_022728	206233	-	AK128026 NM_194300	382688	+	NM_001145123 NM_006658	552341	+	NM_001118|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199635|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199636|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199637|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK290046|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK226138|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##L01406|GHRHR|2692|growth hormone releasing hormone receptor##L09237|GHRHR|2692|growth hormone releasing hormone receptor##NM_000823|GHRHR|2692|growth hormone releasing hormone receptor##AY557192|GHRHR|2692|growth hormone releasing hormone receptor##AK309608|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185060|AQP1|358|aquaporin 1 (Colton blood group)##AK309691|AQP1|358|aquaporin 1 (Colton blood group)##AK309688|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185061|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185062|AQP1|358|aquaporin 1 (Colton blood group)##AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129##NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17	0.999884	CTCF.p2:-25:1.000
chr7	118838116	118838224	reg1015947.p1	8.627	+	NM_019644 AK302407	-973436	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-1013999	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-1324627	-	AK307139 AB028967 NM_012281	1075534	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	1659850	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	1659990	-	NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12	0.54893	CTCF.p2:10:0.549
chr7	141485850	141485975	reg1017334.p1	8.627	+	BC130439 BC136508 HQ258372 NM_016944	-7648	+	BC095523 NM_016943 BC069337	-21985	+	TSC_hg19_v1_chr7_+_141438200 BC008402 BC093054 AK294393 AF277319 M94556 NM_003143 AK311200 AK313033 BC000895	-47648	+	BC095522 NM_018980 BC101586 BC101588 CU686868 BC069509	4176	+	AK172866 NM_001008270 NM_001171951 AK097648	55340	-	BC136819 BC136821 NM_001001656	132733	+	BC130439|TAS2R4|50832|taste receptor, type 2, member 4##BC136508|TAS2R4|50832|taste receptor, type 2, member 4##HQ258372|TAS2R4|50832|taste receptor, type 2, member 4##NM_016944|TAS2R4|50832|taste receptor, type 2, member 4##BC095523|TAS2R3|50831|taste receptor, type 2, member 3##NM_016943|TAS2R3|50831|taste receptor, type 2, member 3##BC069337|TAS2R3|50831|taste receptor, type 2, member 3##BC008402|SSBP1|6742|single-stranded DNA binding protein 1##BC093054|SSBP1|6742|single-stranded DNA binding protein 1##AK294393|SSBP1|6742|single-stranded DNA binding protein 1##AF277319|SSBP1|6742|single-stranded DNA binding protein 1##M94556|SSBP1|6742|single-stranded DNA binding protein 1##NM_003143|SSBP1|6742|single-stranded DNA binding protein 1##AK313033|SSBP1|6742|single-stranded DNA binding protein 1##BC000895|SSBP1|6742|single-stranded DNA binding protein 1##BC095522|TAS2R5|54429|taste receptor, type 2, member 5##NM_018980|TAS2R5|54429|taste receptor, type 2, member 5##BC101586|TAS2R5|54429|taste receptor, type 2, member 5##BC101588|TAS2R5|54429|taste receptor, type 2, member 5##BC069509|TAS2R5|54429|taste receptor, type 2, member 5##AK172866|PRSS37|136242|protease, serine, 37##NM_001008270|PRSS37|136242|protease, serine, 37##NM_001171951|PRSS37|136242|protease, serine, 37##AK097648|PRSS37|136242|protease, serine, 37##BC136819|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4##BC136821|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4##NM_001001656|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4	0.996316	CTCF.p2:17:0.996
chr8	33373603	33373784	reg1014828.p1	8.627	+	AK026916 TSC_hg19_v1_chr8_-_33370644 BX648410 BC007387 BC066935 NM_025115 NM_001102401	-3066	-	NM_032509 TSC_hg19_v1_chr8_+_33342703 AK314491 AK225476 AK027469 BC015965 AF251062 BC039740 BC028230 BC050528 CU690708	-30989	+	AK098505 AK297132 TSC_hg19_v1_chr8_-_33330636 AK303231 AJ512465 AJ535838 AJ535839 AK292993 AJ582015 NM_032664	-43047	-	AK022588 NM_024787 TSC_hg19_v1_chr8_-_33424647	50970	-	TSC_hg19_v1_chr8_-_33457295 BC067804	83594	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	83766	-	AK026916|TTI2|80185|TELO2 interacting protein 2##BX648410|TTI2|80185|TELO2 interacting protein 2##BC007387|TTI2|80185|TELO2 interacting protein 2##BC066935|TTI2|80185|TELO2 interacting protein 2##NM_025115|TTI2|80185|TELO2 interacting protein 2##NM_001102401|TTI2|80185|TELO2 interacting protein 2##NM_032509|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK314491|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK225476|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK027469|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC015965|MAK16|84549|MAK16 homolog (S. cerevisiae)##AF251062|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC039740|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC028230|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC050528|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK098505|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK297132|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK303231|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ512465|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535838|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535839|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK292993|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ582015|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032664|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK022588|RNF122|79845|ring finger protein 122##NM_024787|RNF122|79845|ring finger protein 122##BC067804|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)	0.389129	CTCF.p2:-14:0.389
chr5	180864182	180864340	reg1003387.p1	8.626	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-69984	+	TSC_hg19_v1_chr5_+_180688213 BC016291	-176034	+	AK054802 TSC_hg19_v1_chr5_-_180688115 BC007372 NM_032765 AB209243	-176136	-	None	None	None	None	None	None	None	None	None	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##AK054802|TRIM52|84851|tripartite motif containing 52##BC007372|TRIM52|84851|tripartite motif containing 52##NM_032765|TRIM52|84851|tripartite motif containing 52##AB209243|TRIM52|84851|tripartite motif containing 52	2.928377	CTCF.p2:17:0.977	CTCF.p2:-50:0.974	CTCF.p2:85:0.977
chr7	117040031	117040155	reg1015873.p1	8.626	+	BC078170 AK056742 NM_003391 X07876	-76758	-	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	-379728	+	TSC_hg19_v1_chr7_+_116660271 AK093212	-379826	+	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	27452	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	79945	+	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	473388	-	BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##AK093212|ST7|7982|suppression of tumorigenicity 7##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2	0.986205	CTCF.p2:-28:0.986
chr12	118493012	118493150	reg1017240.p1	8.625	+	NM_001130112 NM_001206801 NM_007370 NM_181578 TSC_hg19_v1_chr12_+_118454507 AK291107 AK094575 AK290685 BC001866 BC013961 AB208992 BC020440 L07540 AB464140 CU674898 CR407651	-38513	+	NM_173598	-87054	-	AK294435 AF446135 EU753241 U17327 AK307481 NM_000620 NM_001204218	-693573	-	AK310892 TSC_hg19_v1_chr12_-_118498977 BC015887 AK298513 AF229181 NM_018639	5854	-	TSC_hg19_v1_chr12_-_118499892 AK295555	6854	-	TSC_hg19_v1_chr12_-_118541813 BC001437 BC028698 BC034471 NM_019086 AK000681	48669	-	NM_001130112|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_001206801|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_007370|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_181578|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK291107|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK094575|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK290685|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC001866|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC013961|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AB208992|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC020440|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##L07540|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##CR407651|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_173598|KSR2|283455|kinase suppressor of ras 2##AK294435|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446135|NOS1|4842|nitric oxide synthase 1 (neuronal)##EU753241|NOS1|4842|nitric oxide synthase 1 (neuronal)##U17327|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK307481|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_000620|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204218|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK310892|WSB2|55884|WD repeat and SOCS box containing 2##BC015887|WSB2|55884|WD repeat and SOCS box containing 2##AK298513|WSB2|55884|WD repeat and SOCS box containing 2##AF229181|WSB2|55884|WD repeat and SOCS box containing 2##NM_018639|WSB2|55884|WD repeat and SOCS box containing 2##AK295555|WSB2|55884|WD repeat and SOCS box containing 2##BC001437|VSIG10|54621|V-set and immunoglobulin domain containing 10##BC028698|VSIG10|54621|V-set and immunoglobulin domain containing 10##BC034471|VSIG10|54621|V-set and immunoglobulin domain containing 10##NM_019086|VSIG10|54621|V-set and immunoglobulin domain containing 10##AK000681|VSIG10|54621|V-set and immunoglobulin domain containing 10	0.996561	CTCF.p2:-4:0.997
chr17	48439452	48439584	reg1016376.p1	8.625	+	TSC_hg19_v1_chr17_+_48423495 AJ277442 NM_022167 BC052262 AK299999 BC036069 AY358090	-16052	+	NM_153229 AK090637 AX746552 BC064507	-87695	+	AY358204 NM_001168215	-90752	+	BC001066 AB049647 TSC_hg19_v1_chr17_-_48450546 AK023576 BC021986 AF151084 AK315758 NM_016504	11028	-	TSC_hg19_v1_chr17_+_48450609 NM_001166131 NM_152463 AK055926 AK308275	11078	+	DQ892375 DQ895589 TSC_hg19_v1_chr17_-_48474845 BC052279	35252	-	AJ277442|XYLT2|64132|xylosyltransferase II##NM_022167|XYLT2|64132|xylosyltransferase II##BC052262|XYLT2|64132|xylosyltransferase II##AK299999|XYLT2|64132|xylosyltransferase II##BC036069|XYLT2|64132|xylosyltransferase II##AY358090|XYLT2|64132|xylosyltransferase II##NM_153229|TMEM92|162461|transmembrane protein 92##AK090637|TMEM92|162461|transmembrane protein 92##BC064507|TMEM92|162461|transmembrane protein 92##AY358204|TMEM92|162461|transmembrane protein 92##NM_001168215|TMEM92|162461|transmembrane protein 92##BC001066|MRPL27|51264|mitochondrial ribosomal protein L27##AB049647|MRPL27|51264|mitochondrial ribosomal protein L27##AK023576|MRPL27|51264|mitochondrial ribosomal protein L27##BC021986|MRPL27|51264|mitochondrial ribosomal protein L27##AF151084|MRPL27|51264|mitochondrial ribosomal protein L27##AK315758|MRPL27|51264|mitochondrial ribosomal protein L27##NM_016504|MRPL27|51264|mitochondrial ribosomal protein L27##NM_001166131|EME1|146956|essential meiotic endonuclease 1 homolog 1 (S. pombe)##NM_152463|EME1|146956|essential meiotic endonuclease 1 homolog 1 (S. pombe)##AK055926|EME1|146956|essential meiotic endonuclease 1 homolog 1 (S. pombe)##AK308275|EME1|146956|essential meiotic endonuclease 1 homolog 1 (S. pombe)##DQ892375|LRRC59|55379|leucine rich repeat containing 59##DQ895589|LRRC59|55379|leucine rich repeat containing 59##BC052279|LRRC59|55379|leucine rich repeat containing 59	0.996262	CTCF.p2:7:0.996
chr17	62645345	62645467	reg1015257.p2	8.625	+	TSC_hg19_v1_chr17_+_62503186 AL832822	-142213	+	TSC_hg19_v1_chr17_+_62503108 AK316257 AK290587 AK297409 BC009518 NM_138363	-142282	+	TSC_hg19_v1_chr17_+_62502879 AK057326	-142502	+	AF310676 AB385561 AF301463 BC051283 BC093876 BC111945 TSC_hg19_v1_chr17_-_62658136	12661	-	TSC_hg19_v1_chr17_-_62658187 AY014180	12776	-	TSC_hg19_v1_chr17_-_62658414 CR936721 NM_022739	12959	-	AL832822|CEP95|90799|centrosomal protein 95kDa##AK316257|CEP95|90799|centrosomal protein 95kDa##AK290587|CEP95|90799|centrosomal protein 95kDa##AK297409|CEP95|90799|centrosomal protein 95kDa##BC009518|CEP95|90799|centrosomal protein 95kDa##NM_138363|CEP95|90799|centrosomal protein 95kDa##AK057326|CEP95|90799|centrosomal protein 95kDa##AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	0.939715	CTCF.p2:15:0.940
chr3	70600025	70600141	reg1012204.p1	8.625	+	TSC_hg19_v1_chr3_+_70048883 BC015590	-551195	+	NM_000248 NM_001184968 NM_198158 NM_198178 Z29678 BC012503 BC065243 BC026961 GU355676	-614272	+	NM_198177 AB006989 AK297858	-684682	+	TSC_hg19_v1_chr3_-_71114076 AK074569 NM_001244813	514113	-	TSC_hg19_v1_chr3_-_71179732 AK027264	579640	-	AK297649 TSC_hg19_v1_chr3_-_71179738 BX647682	579657	-	NM_000248|MITF|4286|microphthalmia-associated transcription factor##NM_001184968|MITF|4286|microphthalmia-associated transcription factor##NM_198158|MITF|4286|microphthalmia-associated transcription factor##NM_198178|MITF|4286|microphthalmia-associated transcription factor##Z29678|MITF|4286|microphthalmia-associated transcription factor##BC012503|MITF|4286|microphthalmia-associated transcription factor##BC065243|MITF|4286|microphthalmia-associated transcription factor##BC026961|MITF|4286|microphthalmia-associated transcription factor##GU355676|MITF|4286|microphthalmia-associated transcription factor##NM_198177|MITF|4286|microphthalmia-associated transcription factor##AB006989|MITF|4286|microphthalmia-associated transcription factor##AK297858|MITF|4286|microphthalmia-associated transcription factor##AK074569|FOXP1|27086|forkhead box P1##NM_001244813|FOXP1|27086|forkhead box P1##AK027264|FOXP1|27086|forkhead box P1##AK297649|FOXP1|27086|forkhead box P1##BX647682|FOXP1|27086|forkhead box P1	0.991574	CTCF.p2:-2:0.992
chr9	112163855	112163995	reg1014553.p1	8.625	+	TSC_hg19_v1_chr9_-_112083330 AB032179	-80635	-	TSC_hg19_v1_chr9_-_112083007 AF153416 AF153418 NM_018424 NM_019114	-80913	-	TSC_hg19_v1_chr9_-_111929489 AF155065 NM_014334	-234396	-	AK296265 AK296388 AK316118 NM_001145371 NM_001145372	27288	-	BX648253 NM_001145369 NM_001145370	49738	-	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	96664	-	AB032179|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF153416|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF153418|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_018424|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_019114|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF155065|C9orf4|23732|chromosome 9 open reading frame 4##NM_014334|C9orf4|23732|chromosome 9 open reading frame 4##AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BX648253|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145369|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145370|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	0.710323	CTCF.p2:-2:0.710
chr10	100802603	100802718	reg1015383.p2	8.624	+	TSC_hg19_v1_chr10_-_100206705 NM_000195 NM_182639	-595949	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	-595985	-	BC002514 TSC_hg19_v1_chr10_-_100206650	-596014	-	AJ299720 AK094037 BC112356 AF282885 AF282886 AF282887 AJ299719 AK314759 NM_001166244 NM_001166245 NM_001166246 NM_021828	192934	-	TSC_hg19_v1_chr10_+_101088794 NM_020348	286164	+	TSC_hg19_v1_chr10_+_101089114 AK308618	286466	+	NM_000195|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_182639|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1##AJ299720|HPSE2|60495|heparanase 2##AK094037|HPSE2|60495|heparanase 2##BC112356|HPSE2|60495|heparanase 2##AF282885|HPSE2|60495|heparanase 2##AF282886|HPSE2|60495|heparanase 2##AF282887|HPSE2|60495|heparanase 2##AJ299719|HPSE2|60495|heparanase 2##AK314759|HPSE2|60495|heparanase 2##NM_001166244|HPSE2|60495|heparanase 2##NM_001166245|HPSE2|60495|heparanase 2##NM_001166246|HPSE2|60495|heparanase 2##NM_021828|HPSE2|60495|heparanase 2##NM_020348|CNNM1|26507|cyclin M1##AK308618|CNNM1|26507|cyclin M1	0.880067	CTCF.p2:5:0.880
chr2	200604679	200604784	reg1013847.p2	8.624	+	AK291463 NM_015265	-268743	-	TSC_hg19_v1_chr2_-_200329812 AB209376 NM_001172517	-274911	-	AB028957 TSC_hg19_v1_chr2_-_200325214	-279490	-	AB568489 TSC_hg19_v1_chr2_-_200715872	111132	-	BC039445 TSC_hg19_v1_chr2_-_200715916	111182	-	TSC_hg19_v1_chr2_+_200775981 NM_153689	171246	+	AK291463|SATB2|23314|SATB homeobox 2##NM_015265|SATB2|23314|SATB homeobox 2##AB209376|SATB2|23314|SATB homeobox 2##NM_001172517|SATB2|23314|SATB homeobox 2##AB028957|SATB2|23314|SATB homeobox 2##AB568489|FONG|348751|uncharacterized LOC348751##BC039445|FONG|348751|uncharacterized LOC348751##NM_153689|C2orf69|205327|chromosome 2 open reading frame 69	0.999749	CTCF.p2:-4:1.000
chrX	134909132	134909266	reg1013991.p1	8.624	+	AY743711 NM_001017435 BC028711 BC140735 BC140926 BC144437	-25666	+	AK098689 AY743710 AY743712 NM_001017436 NM_152582 BC028711 BC140735 BC140926 BC144437	-42940	+	AY743709 NM_001017417 BC140735 BC140926 BC144437 BC140913	-61965	+	AY743711 AY743712 NM_001017436	27535	-	BC144527 BC144528 AY743713 NM_001007551 NM_001172288	44746	-	BC140913 BC144429 BC144430 BC140735 BC140926 BC144437 AK098689 AY743714 NM_001017438	61993	-	AY743711|CT45A3|441519|cancer/testis antigen family 45, member A3##NM_001017435|CT45A3|441519|cancer/testis antigen family 45, member A3##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##AK098689|CT45A4|441520|cancer/testis antigen family 45, member A4##AY743710|CT45A2|728911|cancer/testis antigen family 45, member A2##AY743712|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_001017436|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_152582|CT45A2|728911|cancer/testis antigen family 45, member A2##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##AY743709|CT45A1|541466|cancer/testis antigen family 45, member A1##NM_001017417|CT45A1|541466|cancer/testis antigen family 45, member A1##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1##AY743711|CT45A3|441519|cancer/testis antigen family 45, member A3##AY743712|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_001017436|CT45A4|441520|cancer/testis antigen family 45, member A4##BC144527|CT45A5|441521|cancer/testis antigen family 45, member A5##BC144528|CT45A5|441521|cancer/testis antigen family 45, member A5##AY743713|CT45A5|441521|cancer/testis antigen family 45, member A5##NM_001007551|CT45A5|441521|cancer/testis antigen family 45, member A5##NM_001172288|CT45A5|441521|cancer/testis antigen family 45, member A5##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1##BC144429|CT45A5|441521|cancer/testis antigen family 45, member A5##BC144430|CT45A5|441521|cancer/testis antigen family 45, member A5##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##AK098689|CT45A4|441520|cancer/testis antigen family 45, member A4##AY743714|CT45A6|541465|cancer/testis antigen family 45, member A6##NM_001017438|CT45A6|541465|cancer/testis antigen family 45, member A6	0.901782	CTCF.p2:-7:0.891
chr17	20752264	20752420	reg1014778.p1	8.623	+	NM_001190790	-269306	+	BC105943 AK290263 NM_001042685 AK296659	-381507	-	TSC_hg19_v1_chr17_+_20224469 BC036241	-527876	+	AK057473 TSC_hg19_v1_chr17_+_20771859 BC041488 EF565107	19463	+	CU686685 BC068597 NM_001004306	47050	-	TSC_hg19_v1_chr17_-_20946322 AB590105 AB028986 NM_015276	193930	-	NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK290263|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001042685|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##BC036241|CCDC144C|348254|coiled-coil domain containing 144C##BC068597|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001004306|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##AB028986|USP22|23326|ubiquitin specific peptidase 22##NM_015276|USP22|23326|ubiquitin specific peptidase 22	0.889042	CTCF.p2:13:0.889
chr17	37388411	37388525	reg1014873.p1	8.623	+	BC109231 AJ608762 AK131500 NM_198993	-6489	-	TSC_hg19_v1_chr17_+_37356579 BC000530 S56985 BC013016	-31887	+	TSC_hg19_v1_chr17_+_37356573 AK223082 BC062709 BX537435	-31896	+	TSC_hg19_v1_chr17_-_37557855 BC007557 DQ223959 AK312612 AK291844 AK123048 NM_001184906 NM_032875	169432	-	CU687400 BC131783 AF055994 BC006517 Y13467 BC060758 TSC_hg19_v1_chr17_-_37607519 AK299789 AK314185 NM_004774	218953	-	TSC_hg19_v1_chr17_+_37617760 NM_015083 NM_016507 AK302645	229284	+	BC109231|STAC2|342667|SH3 and cysteine rich domain 2##AJ608762|STAC2|342667|SH3 and cysteine rich domain 2##AK131500|STAC2|342667|SH3 and cysteine rich domain 2##NM_198993|STAC2|342667|SH3 and cysteine rich domain 2##BC000530|RPL19|6143|ribosomal protein L19##S56985|RPL19|6143|ribosomal protein L19##BC013016|RPL19|6143|ribosomal protein L19##AK223082|RPL19|6143|ribosomal protein L19##BC062709|RPL19|6143|ribosomal protein L19##BX537435|RPL19|6143|ribosomal protein L19##BC007557|FBXL20|84961|F-box and leucine-rich repeat protein 20##DQ223959|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK312612|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK291844|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK123048|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_001184906|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_032875|FBXL20|84961|F-box and leucine-rich repeat protein 20##BC131783|MED1|5469|mediator complex subunit 1##AF055994|MED1|5469|mediator complex subunit 1##BC006517|MED1|5469|mediator complex subunit 1##Y13467|MED1|5469|mediator complex subunit 1##BC060758|MED1|5469|mediator complex subunit 1##AK299789|MED1|5469|mediator complex subunit 1##AK314185|MED1|5469|mediator complex subunit 1##NM_004774|MED1|5469|mediator complex subunit 1##NM_015083|CDK12|51755|cyclin-dependent kinase 12##NM_016507|CDK12|51755|cyclin-dependent kinase 12##AK302645|CDK12|51755|cyclin-dependent kinase 12	0.899061	CTCF.p2:23:0.899
chr6_qbl_hap6	2456286	2456399	reg1016005.p1	8.623	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.998737	CTCF.p2:6:0.999
chr7	149359782	149359887	reg1015400.p1	8.623	+	TSC_hg19_v1_chr7_-_149321856 BC047675	-37980	-	AB590454 AK295771 TSC_hg19_v1_chr7_-_149321793 AK022762	-38092	-	TSC_hg19_v1_chr7_-_149194899 NM_001163474 NM_152557 AK128244	-164936	-	TSC_hg19_v1_chr7_+_149412043 BC142722 BC146667 AB058765 BC150330 BC152409 NM_032534	52253	+	BC052625 NM_207336 BC038972	110466	-	NM_198455	113296	+	BC047675|ZNF767|79970|zinc finger family member 767##AK295771|ZNF767|79970|zinc finger family member 767##AK022762|ZNF767|79970|zinc finger family member 767##NM_001163474|ZNF746|155061|zinc finger protein 746##NM_152557|ZNF746|155061|zinc finger protein 746##AK128244|ZNF746|155061|zinc finger protein 746##BC142722|KRBA1|84626|KRAB-A domain containing 1##BC146667|KRBA1|84626|KRAB-A domain containing 1##AB058765|KRBA1|84626|KRAB-A domain containing 1##BC150330|KRBA1|84626|KRAB-A domain containing 1##BC152409|KRBA1|84626|KRAB-A domain containing 1##NM_032534|KRBA1|84626|KRAB-A domain containing 1##BC052625|ZNF467|168544|zinc finger protein 467##NM_207336|ZNF467|168544|zinc finger protein 467##BC038972|ZNF467|168544|zinc finger protein 467##NM_198455|SSPO|23145|SCO-spondin homolog (Bos taurus)	0.898723	CTCF.p2:0:0.789
chr17	38447096	38447213	reg1015135.p1	8.622	+	TSC_hg19_v1_chr17_+_38444176 BC025232 AF022109	-2940	+	TSC_hg19_v1_chr17_+_38444134 NM_001254 U77949	-3014	+	AK313620 TSC_hg19_v1_chr17_+_38444130	-3024	+	NM_000964 BC008727 AK312564	18280	+	NM_001145301 NM_001145302 TSC_hg19_v1_chr17_+_38474476	27326	+	TSC_hg19_v1_chr17_+_38474521 AK292205 FJ487576	27370	+	BC025232|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##AF022109|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##NM_001254|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##U77949|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##AK313620|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##NM_000964|RARA|5914|retinoic acid receptor, alpha##BC008727|RARA|5914|retinoic acid receptor, alpha##AK312564|RARA|5914|retinoic acid receptor, alpha##NM_001145301|RARA|5914|retinoic acid receptor, alpha##NM_001145302|RARA|5914|retinoic acid receptor, alpha##AK292205|RARA|5914|retinoic acid receptor, alpha##FJ487576|RARA|5914|retinoic acid receptor, alpha	0.999058	CTCF.p2:-1:0.999
chr2	166095792	166095906	reg1015881.p1	8.622	+	AF225986 AF225987 AK299757 TSC_hg19_v1_chr2_-_166060561 NM_001081676 NM_001081677 NM_006922 DQ993536	-35272	-	AK293998 AK097141 NM_001199148 NM_173512	-283835	-	AK225849 BC006264 TSC_hg19_v1_chr2_-_165698685 AK294937	-397227	-	AK289656 NM_001040142 DQ993531 BC029489 BC047398 BC048417	83	+	NM_021007	54491	+	NM_001040143	56433	+	AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AK293998|SLC38A11|151258|solute carrier family 38, member 11##AK097141|SLC38A11|151258|solute carrier family 38, member 11##NM_001199148|SLC38A11|151258|solute carrier family 38, member 11##NM_173512|SLC38A11|151258|solute carrier family 38, member 11##AK225849|COBLL1|22837|COBL-like 1##BC006264|COBLL1|22837|COBL-like 1##AK294937|COBLL1|22837|COBL-like 1##AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_021007|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_001040143|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	0.910337	CTCF.p2:8:0.910
chr3	186784579	186784690	reg1014223.p1	8.622	+	AK292879 BC040009 NM_003032 X62822 BC031476 L11720 X54363	-44962	+	U67847 TSC_hg19_v1_chr3_+_186714361	-70286	+	X17247 TSC_hg19_v1_chr3_+_186648632	-136057	+	TSC_hg19_v1_chr3_-_186857285 L05096 AB063610 BC012328 NM_052969	72622	-	BC065202 NM_153708 BC034744 DQ890807 DQ893962 AY562235	130708	+	BC106945 BC106946 TSC_hg19_v1_chr3_-_187009489 AK291686 AK129893 AK304334 AK300663 BX647237 AK291157 CR749615 BC039724 NM_001031849 NM_001879 NM_139125	225005	-	AK292879|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC040009|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_003032|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X62822|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC031476|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##L11720|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X54363|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##L05096|RPL39L|116832|ribosomal protein L39-like##AB063610|RPL39L|116832|ribosomal protein L39-like##BC012328|RPL39L|116832|ribosomal protein L39-like##NM_052969|RPL39L|116832|ribosomal protein L39-like##BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1##NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1##BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1##AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1##BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	0.0	
chr4	23137547	23137657	reg1012572.p1	8.622	+	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	-443010	+	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	-620048	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	-1187218	-	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	754051	-	AF279891 TSC_hg19_v1_chr4_-_24586127	1448474	-	TSC_hg19_v1_chr4_-_24586154 AK303506 BC035974	1448558	-	BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##NM_147182|KCNIP4|80333|Kv channel interacting protein 4##AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.03895	
chr9	26856528	26856671	reg1016006.p1	8.622	+	AK131322 NM_001004352	-789927	+	NM_001004125	-1177744	-	BC017510 TSC_hg19_v1_chr9_-_25678278 BC046919 AY168647 BC110824	-1178266	-	AB590748 CU687198 BC071953 TSC_hg19_v1_chr9_-_26892779 AK023719 BC014658 NM_001167575 NM_024828	36170	-	EU176453 EU176795 AB385043 TSC_hg19_v1_chr9_-_26947158 BC032551 AK022761	90505	-	TSC_hg19_v1_chr9_-_26947165 AK001642	90569	-	AK131322|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004352|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004125|TUSC1|286319|tumor suppressor candidate 1##BC017510|TUSC1|286319|tumor suppressor candidate 1##BC046919|TUSC1|286319|tumor suppressor candidate 1##AY168647|TUSC1|286319|tumor suppressor candidate 1##BC110824|TUSC1|286319|tumor suppressor candidate 1##BC071953|C9orf82|79886|chromosome 9 open reading frame 82##AK023719|C9orf82|79886|chromosome 9 open reading frame 82##BC014658|C9orf82|79886|chromosome 9 open reading frame 82##NM_001167575|C9orf82|79886|chromosome 9 open reading frame 82##NM_024828|C9orf82|79886|chromosome 9 open reading frame 82##EU176453|PLAA|9373|phospholipase A2-activating protein##EU176795|PLAA|9373|phospholipase A2-activating protein##BC032551|PLAA|9373|phospholipase A2-activating protein##AK022761|PLAA|9373|phospholipase A2-activating protein##AK001642|PLAA|9373|phospholipase A2-activating protein	0.744693	CTCF.p2:-2:0.745
chr11	82575372	82575487	reg1014489.p2	8.621	+	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	-130531	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-3423705	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-4289534	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	36088	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	37345	+	AK312323 TSC_hg19_v1_chr11_-_82782872	207444	-	BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82##AK312323|RAB30|27314|RAB30, member RAS oncogene family	0.403837	CTCF.p2:0:0.404
chr12	27295161	27295296	reg1014895.p1	8.621	+	NM_001080406	-59774	-	TSC_hg19_v1_chr12_+_27175501 U46837 U52960 AB463863 EU446930 AK311838 CR456999	-119713	+	AK309064 BC008380 NM_004264 TSC_hg19_v1_chr12_+_27175482	-119746	+	NM_015000 BC028603 TSC_hg19_v1_chr12_+_27397168	101896	+	TSC_hg19_v1_chr12_+_27397187 AK291055	101959	+	TSC_hg19_v1_chr12_+_27397225 AK304755	101997	+	NM_001080406|C12orf71|728858|chromosome 12 open reading frame 71##U46837|MED21|9412|mediator complex subunit 21##U52960|MED21|9412|mediator complex subunit 21##EU446930|MED21|9412|mediator complex subunit 21##AK311838|MED21|9412|mediator complex subunit 21##CR456999|MED21|9412|mediator complex subunit 21##AK309064|MED21|9412|mediator complex subunit 21##BC008380|MED21|9412|mediator complex subunit 21##NM_004264|MED21|9412|mediator complex subunit 21##NM_015000|STK38L|23012|serine/threonine kinase 38 like##BC028603|STK38L|23012|serine/threonine kinase 38 like##AK291055|STK38L|23012|serine/threonine kinase 38 like##AK304755|STK38L|23012|serine/threonine kinase 38 like	0.998612	CTCF.p2:4:0.999
chr20	10677383	10677536	reg1018382.p1	8.621	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-22890	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	-23255	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-261483	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1193990	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	1221098	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	2312182	+	BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3	0.995728	CTCF.p2:-10:0.996
chr8	12081498	12081592	reg1014384.p1	8.621	+	AK309984 BC062615 BC072459 BC098427 BC048297 AK098138 AK308513 AK297741 AK308439 BC085016 NM_001083537 AK291001 AK298940	-29958	-	AY509884 NM_201402	-85277	-	BC110823 NM_001039615	-134699	+	DQ012022 NM_001037804 NM_001195257	94279	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	212298	-	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	212359	-	AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##BC062615|FAM86B1|85002|family with sequence similarity 86, member B1##BC098427|FAM86B1|85002|family with sequence similarity 86, member B1##BC048297|FAM86B1|85002|family with sequence similarity 86, member B1##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##NM_001083537|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##NM_201402|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC110823|ZNF705D|728957|zinc finger protein 705D##NM_001039615|ZNF705D|728957|zinc finger protein 705D##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2	0.994859	CTCF.p2:-4:0.995
chrY	2512740	2512868	reg1015502.p1	8.621	+	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	-143816	-	BC015030 NM_001171135	-144225	-	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	-828801	+	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	46508	+	S56543 S53156 AB464705 EU446863 BC074923 BC074924 L10101 NM_003140	142830	-	TSC_hg19_v1_chrY_+_2709618 NM_001008	196805	+	BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC015030|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule##S56543|SRY|6736|sex determining region Y##S53156|SRY|6736|sex determining region Y##EU446863|SRY|6736|sex determining region Y##BC074923|SRY|6736|sex determining region Y##BC074924|SRY|6736|sex determining region Y##L10101|SRY|6736|sex determining region Y##NM_003140|SRY|6736|sex determining region Y##NM_001008|RPS4Y1|6192|ribosomal protein S4, Y-linked 1	0.977279	CTCF.p2:13:0.977
chr19	18654895	18655044	reg1014635.p1	8.620	+	TSC_hg19_v1_chr19_-_18654384 BX538124 BX647405 GQ372970 NM_012181	-587	-	TSC_hg19_v1_chr19_-_18654341 AY278607 AK313363 BX647720	-646	-	TSC_hg19_v1_chr19_-_18653874 AK300571	-1192	-	NM_001171948 NM_001171949 NM_024069 TSC_hg19_v1_chr19_+_18668584 AK125365 AK098346 BC001080 BC006479	13641	+	TSC_hg19_v1_chr19_+_18668679 AF173381	13705	+	NM_001033930 NM_003333 TSC_hg19_v1_chr19_+_18682666 AF348700 BC101830 BC101832 BC143668 D28425 AK314717	27688	+	BX538124|FKBP8|23770|FK506 binding protein 8, 38kDa##BX647405|FKBP8|23770|FK506 binding protein 8, 38kDa##GQ372970|FKBP8|23770|FK506 binding protein 8, 38kDa##NM_012181|FKBP8|23770|FK506 binding protein 8, 38kDa##AY278607|FKBP8|23770|FK506 binding protein 8, 38kDa##AK313363|FKBP8|23770|FK506 binding protein 8, 38kDa##BX647720|FKBP8|23770|FK506 binding protein 8, 38kDa##AK300571|FKBP8|23770|FK506 binding protein 8, 38kDa##NM_001171948|KXD1|79036|KxDL motif containing 1##NM_001171949|KXD1|79036|KxDL motif containing 1##NM_024069|KXD1|79036|KxDL motif containing 1##AK125365|KXD1|79036|KxDL motif containing 1##AK098346|KXD1|79036|KxDL motif containing 1##BC001080|KXD1|79036|KxDL motif containing 1##BC006479|KXD1|79036|KxDL motif containing 1##AF173381|KXD1|79036|KxDL motif containing 1##NM_001033930|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##NM_003333|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##AF348700|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##BC101830|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##BC101832|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##BC143668|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##AK314717|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1	0.0	
chr2	55659271	55659418	reg1017986.p1	8.620	+	TSC_hg19_v1_chr2_-_55646993 BC014905 BC041160 BC142646 BC142700 AK025723 NM_001135597 NM_018084	-12340	-	TSC_hg19_v1_chr2_-_55559749 BC056885	-99558	-	BC082973 TSC_hg19_v1_chr2_-_55496365 AK225184 BC054048 AF494407 AK307993 NM_002453	-162979	-	TSC_hg19_v1_chr2_+_55746786 AY358097 NM_080667 AK309764 AK308776 BC010011 CU679569 DQ893082 DQ896343	87482	+	TSC_hg19_v1_chr2_-_55844739 AB037808 BC006215 BC060855 AK296481 AK056036 NM_001122964 NM_020463 BC032531	185450	-	TSC_hg19_v1_chr2_-_55844909 BC045714	185567	-	BC014905|CCDC88A|55704|coiled-coil domain containing 88A##BC041160|CCDC88A|55704|coiled-coil domain containing 88A##BC142646|CCDC88A|55704|coiled-coil domain containing 88A##BC142700|CCDC88A|55704|coiled-coil domain containing 88A##AK025723|CCDC88A|55704|coiled-coil domain containing 88A##NM_001135597|CCDC88A|55704|coiled-coil domain containing 88A##NM_018084|CCDC88A|55704|coiled-coil domain containing 88A##BC056885|CCDC88A|55704|coiled-coil domain containing 88A##BC082973|MTIF2|4528|mitochondrial translational initiation factor 2##AK225184|MTIF2|4528|mitochondrial translational initiation factor 2##BC054048|MTIF2|4528|mitochondrial translational initiation factor 2##AF494407|MTIF2|4528|mitochondrial translational initiation factor 2##AK307993|MTIF2|4528|mitochondrial translational initiation factor 2##NM_002453|MTIF2|4528|mitochondrial translational initiation factor 2##AY358097|CCDC104|112942|coiled-coil domain containing 104##NM_080667|CCDC104|112942|coiled-coil domain containing 104##AK309764|CCDC104|112942|coiled-coil domain containing 104##AK308776|CCDC104|112942|coiled-coil domain containing 104##BC010011|CCDC104|112942|coiled-coil domain containing 104##DQ893082|CCDC104|112942|coiled-coil domain containing 104##DQ896343|CCDC104|112942|coiled-coil domain containing 104##AB037808|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##BC006215|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##BC060855|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##AK296481|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##AK056036|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##NM_001122964|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##NM_020463|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##BC032531|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##BC045714|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)	0.856189	CTCF.p2:2:0.856
chr22	23027587	23027701	reg1010978.p1	8.619	+	TSC_hg19_v1_chr22_+_23010757 L29162	-16884	+	NM_199127 X98922 CU686896 BC069534	-38846	+	BC014074 NM_206955 NM_206956 AK304593 TSC_hg19_v1_chr22_-_22901678 BC039731 U65011 NM_006115 NM_206953 NM_206954 BC022008	-126050	-	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	1559	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	12874	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	27238	+	NM_199127|GGTLC2|91227|gamma-glutamyltransferase light chain 2##X98922|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC069534|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC014074|PRAME|23532|preferentially expressed antigen in melanoma##NM_206955|PRAME|23532|preferentially expressed antigen in melanoma##NM_206956|PRAME|23532|preferentially expressed antigen in melanoma##AK304593|PRAME|23532|preferentially expressed antigen in melanoma##BC039731|PRAME|23532|preferentially expressed antigen in melanoma##U65011|PRAME|23532|preferentially expressed antigen in melanoma##NM_006115|PRAME|23532|preferentially expressed antigen in melanoma##NM_206953|PRAME|23532|preferentially expressed antigen in melanoma##NM_206954|PRAME|23532|preferentially expressed antigen in melanoma##BC022008|PRAME|23532|preferentially expressed antigen in melanoma##BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25##DQ896079|IGL@|3535|immunoglobulin lambda locus##BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3	0.961017	CTCF.p2:-28:0.961
chr3	195621603	195621714	reg1013322.p1	8.619	+	BC008884 AK225786 BC020389 TSC_hg19_v1_chr3_-_195619679	-2093	-	EF091824 AJ242549 AJ242550 AJ276359 AJ277412 AJ277505 AJ400633 AJ400849 AJ400850 AJ400851 AJ400852 AJ400853 AJ400854 AJ400855 AJ400856 AJ400857 AJ400858 TSC_hg19_v1_chr3_-_195538801 AK307054 NM_004532 NM_018406 NM_138297	-82887	-	NM_001098516	-170561	+	AK131539 NM_001010938	773	-	NM_005781 L13738	14258	-	TSC_hg19_v1_chr3_-_195717156 BC071730 AK300421 AK316025 AK299148	95473	-	BC008884|TNK2|10188|tyrosine kinase, non-receptor, 2##AK225786|TNK2|10188|tyrosine kinase, non-receptor, 2##BC020389|TNK2|10188|tyrosine kinase, non-receptor, 2##EF091824|MUC4|4585|mucin 4, cell surface associated##AJ242549|MUC4|4585|mucin 4, cell surface associated##AJ242550|MUC4|4585|mucin 4, cell surface associated##AJ276359|MUC4|4585|mucin 4, cell surface associated##AJ277412|MUC4|4585|mucin 4, cell surface associated##AJ277505|MUC4|4585|mucin 4, cell surface associated##AJ400633|MUC4|4585|mucin 4, cell surface associated##AJ400849|MUC4|4585|mucin 4, cell surface associated##AJ400850|MUC4|4585|mucin 4, cell surface associated##AJ400851|MUC4|4585|mucin 4, cell surface associated##AJ400852|MUC4|4585|mucin 4, cell surface associated##AJ400853|MUC4|4585|mucin 4, cell surface associated##AJ400854|MUC4|4585|mucin 4, cell surface associated##AJ400855|MUC4|4585|mucin 4, cell surface associated##AJ400856|MUC4|4585|mucin 4, cell surface associated##AJ400857|MUC4|4585|mucin 4, cell surface associated##AJ400858|MUC4|4585|mucin 4, cell surface associated##AK307054|MUC4|4585|mucin 4, cell surface associated##NM_004532|MUC4|4585|mucin 4, cell surface associated##NM_018406|MUC4|4585|mucin 4, cell surface associated##NM_138297|MUC4|4585|mucin 4, cell surface associated##NM_001098516|MUC20|200958|mucin 20, cell surface associated##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_005781|TNK2|10188|tyrosine kinase, non-receptor, 2##L13738|TNK2|10188|tyrosine kinase, non-receptor, 2##BC071730|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AK316025|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK299148|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1	0.997388	CTCF.p2:-1:0.997
chr11	83382433	83382580	reg1019308.p1	8.618	+	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	-385101	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	-385473	-	BX648690 NM_182603 DQ508815 AK095193 BC171752	-477018	+	AK299778 CR933674 NM_001142702	10945	-	AK294375 AK126776 AK295624 NM_001142700	601770	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	645875	-	AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##BX648690|ANKRD42|338699|ankyrin repeat domain 42##NM_182603|ANKRD42|338699|ankyrin repeat domain 42##DQ508815|ANKRD42|338699|ankyrin repeat domain 42##AK095193|ANKRD42|338699|ankyrin repeat domain 42##BC171752|ANKRD42|338699|ankyrin repeat domain 42##AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)	0.867211	CTCF.p2:27:0.867
chr20	39861086	39861211	reg1015071.p1	8.618	+	TSC_hg19_v1_chr20_-_39766625 BC035080	-94540	-	TSC_hg19_v1_chr20_+_39766146 NM_002660 NM_182811 BC136466 BC144136 M34667	-94960	+	TSC_hg19_v1_chr20_+_39765861 AB210028	-95286	+	AK122905 AK097523 AB081948 BC047070 AK292415 NM_015035	67575	-	TSC_hg19_v1_chr20_-_39946149 AB007855	85067	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	108367	+	NM_002660|PLCG1|5335|phospholipase C, gamma 1##NM_182811|PLCG1|5335|phospholipase C, gamma 1##BC136466|PLCG1|5335|phospholipase C, gamma 1##BC144136|PLCG1|5335|phospholipase C, gamma 1##M34667|PLCG1|5335|phospholipase C, gamma 1##AB210028|PLCG1|5335|phospholipase C, gamma 1##AK122905|ZHX3|23051|zinc fingers and homeoboxes 3##AK097523|ZHX3|23051|zinc fingers and homeoboxes 3##AB081948|ZHX3|23051|zinc fingers and homeoboxes 3##BC047070|ZHX3|23051|zinc fingers and homeoboxes 3##AK292415|ZHX3|23051|zinc fingers and homeoboxes 3##NM_015035|ZHX3|23051|zinc fingers and homeoboxes 3##AB007855|ZHX3|23051|zinc fingers and homeoboxes 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3	0.947652	CTCF.p2:52:0.948
chr2	143738439	143738574	reg1013897.p1	8.618	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-103266	+	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	-103300	+	AF176832 NM_018557	-849237	-	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	148424	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	148485	+	NM_024659	1256399	-	BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1	0.979781	CTCF.p2:46:0.980
chr19	4633356	4633465	reg1015810.p2	8.617	+	BC142617 TSC_hg19_v1_chr19_-_4559731 AK300037 NM_032108	-73669	-	AK127689 BC070198 TSC_hg19_v1_chr19_-_4540114	-93310	-	AF403428 NM_052972 BC034389 AB073607 AK027382 AK303861 AK314506 TSC_hg19_v1_chr19_-_4540049	-93366	-	NM_152362 TSC_hg19_v1_chr19_+_4639539 BC017672 AK097251	6128	+	NM_001167942	6618	+	BC003639 AL365373 AL365374 AF282264 AB590867 BC014655 AK098829 TSC_hg19_v1_chr19_-_4670355	36933	-	BC142617|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##AK300037|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##NM_032108|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##BC070198|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AF403428|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_052972|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##BC034389|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AB073607|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK027382|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK303861|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK314506|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_152362|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC017672|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##AK097251|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##NM_001167942|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC003639|C19orf10|56005|chromosome 19 open reading frame 10##AL365373|C19orf10|56005|chromosome 19 open reading frame 10##AL365374|C19orf10|56005|chromosome 19 open reading frame 10##AF282264|C19orf10|56005|chromosome 19 open reading frame 10##BC014655|C19orf10|56005|chromosome 19 open reading frame 10##AK098829|C19orf10|56005|chromosome 19 open reading frame 10	0.724231	CTCF.p2:-7:0.724
chr6	148444	148625	reg1004575.p1	8.616	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	143551	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	143963	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	243230	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	1.460797	CTCF.p2:-54:0.999	CTCF.p2:66:0.279
chrX	7050585	7050722	reg1017762.p1	8.616	+	AF167078 AF167079 NM_016379	-597495	-	AK055471 BC034018 NM_181332	-903973	-	AB033086 AF376803 AX773938 NM_020742	-904766	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	15298	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	15539	-	NM_000351 M16505 J04964 AK314034	86848	+	AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S	0.991353	CTCF.p2:6:0.991
chr17	45693304	45693444	reg1016607.p1	8.615	+	TSC_hg19_v1_chr17_+_45608738 BC065294	-84623	+	TSC_hg19_v1_chr17_+_45608647 AK095877 AK296887 AJ132583	-84693	+	TSC_hg19_v1_chr17_+_45608556 AK096709	-84802	+	TSC_hg19_v1_chr17_+_45726838 AK316421	33467	+	L38951 NM_002265 TSC_hg19_v1_chr17_+_45727284	33910	+	BC036703 TSC_hg19_v1_chr17_+_45727323 AK314780 BC003572 BC024045	33971	+	BC065294|NPEPPS|9520|aminopeptidase puromycin sensitive##AK095877|NPEPPS|9520|aminopeptidase puromycin sensitive##AK296887|NPEPPS|9520|aminopeptidase puromycin sensitive##AJ132583|NPEPPS|9520|aminopeptidase puromycin sensitive##AK096709|NPEPPS|9520|aminopeptidase puromycin sensitive##AK316421|KPNB1|3837|karyopherin (importin) beta 1##L38951|KPNB1|3837|karyopherin (importin) beta 1##NM_002265|KPNB1|3837|karyopherin (importin) beta 1##BC036703|KPNB1|3837|karyopherin (importin) beta 1##AK314780|KPNB1|3837|karyopherin (importin) beta 1##BC003572|KPNB1|3837|karyopherin (importin) beta 1##BC024045|KPNB1|3837|karyopherin (importin) beta 1	0.997211	CTCF.p2:7:0.997
chr8	30670366	30670512	reg1016909.p1	8.615	+	TSC_hg19_v1_chr8_-_30670335 NM_001009552	-88	-	TSC_hg19_v1_chr8_-_30670318 AK091875	-127	-	J03805 BT019526 CR541747 AF444006 CU680166 AB590734 X12656 BC012022 TSC_hg19_v1_chr8_-_30669990	-470	-	AF285605 NM_031271 BC140934	36130	-	BC106708 NM_013357	219877	-	NM_000553	220338	+	NM_001009552|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##AK091875|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##J03805|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##BT019526|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##CR541747|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##AF444006|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##X12656|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##BC012022|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##AF285605|TEX15|56154|testis expressed 15##NM_031271|TEX15|56154|testis expressed 15##BC140934|TEX15|56154|testis expressed 15##BC106708|PURG|29942|purine-rich element binding protein G##NM_013357|PURG|29942|purine-rich element binding protein G##NM_000553|WRN|7486|Werner syndrome, RecQ helicase-like	0.029554	
chr11	18000366	18000500	reg1018135.p1	8.614	+	NM_001112741 NM_004976 AB529092	-242914	+	NM_002478 AK314968 TSC_hg19_v1_chr11_+_17741117 BC000353 X56677 BC064493 AB463907 BT007157	-259214	+	CU677569 TSC_hg19_v1_chr11_-_17565964 AK290788 AK300936 AB018687 BC016057 AF039699 AF039700 AK225614 NM_005709 NM_153676	-434516	-	TSC_hg19_v1_chr11_-_18034463 AK294022	34017	-	TSC_hg19_v1_chr11_-_18034595 AJ243950 AJ243951 BC000707 NM_012139	34130	-	BC065375 AK292286 TSC_hg19_v1_chr11_-_18034745	34283	-	NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_002478|MYOD1|4654|myogenic differentiation 1##AK314968|MYOD1|4654|myogenic differentiation 1##X56677|MYOD1|4654|myogenic differentiation 1##BC064493|MYOD1|4654|myogenic differentiation 1##BT007157|MYOD1|4654|myogenic differentiation 1##AK290788|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK300936|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AB018687|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##BC016057|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039699|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039700|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK225614|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_005709|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_153676|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK294022|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243950|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243951|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC000707|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##NM_012139|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC065375|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AK292286|SERGEF|26297|secretion regulating guanine nucleotide exchange factor	0.999803	CTCF.p2:-8:1.000
chr1	240114969	240115072	reg1012628.p1	8.614	+	AF279779 NM_000740	-322648	+	TSC_hg19_v1_chr1_+_239550016 AK056349	-565078	+	AK314151 NM_021186	-2060799	-	TSC_hg19_v1_chr1_+_240255182 NM_020066	140157	+	BC046632 TSC_hg19_v1_chr1_-_240775431	660389	-	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	660434	-	AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##NM_020066|FMN2|56776|formin 2##BC046632|GREM2|64388|gremlin 2##AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2	0.99969	CTCF.p2:-7:1.000
chr3	5610272	5610401	reg1014077.p1	8.614	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-380845	+	TSC_hg19_v1_chr3_+_5229430 D86967	-380903	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	-380973	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	1292463	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	1292562	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	2932994	-	DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK124088|LOC100288428|100288428|uncharacterized LOC100288428	0.950156	CTCF.p2:-14:0.950
chr6_dbb_hap3	4264024	4264145	reg1014767.p1	8.614	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.982461	CTCF.p2:-15:0.982
chr8	57841801	57841924	reg1015158.p1	8.614	+	BC107706 TSC_hg19_v1_chr8_-_57359201 AK309758 AK314908 NM_001135690	-482633	-	CR541808 CR541828 DQ890865 DQ890871 DQ894027 BC032505 NM_006211	-483311	-	TSC_hg19_v1_chr8_+_57358383 AK091563 AX747062	-483490	+	AY032885 TSC_hg19_v1_chr8_-_57906227	64394	-	TSC_hg19_v1_chr8_-_57906381 BC017797	64516	-	BC067814 TSC_hg19_v1_chr8_-_57906402	64540	-	BC107706|PENK|5179|proenkephalin##AK314908|PENK|5179|proenkephalin##NM_001135690|PENK|5179|proenkephalin##CR541808|PENK|5179|proenkephalin##CR541828|PENK|5179|proenkephalin##DQ890865|PENK|5179|proenkephalin##DQ890871|PENK|5179|proenkephalin##DQ894027|PENK|5179|proenkephalin##BC032505|PENK|5179|proenkephalin##NM_006211|PENK|5179|proenkephalin##AY032885|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1	0.372369	CTCF.p2:3:0.372
chr11	18193058	18193178	reg1018402.p1	8.613	+	BC067292 NM_054031	-50617	+	TSC_hg19_v1_chr11_-_18127617 AB489136 BC012010 AK123457 NM_138421	-65498	-	AY196345 BC106739 BC106740 X52836 AB590778 NM_004179	-130799	-	BC095509 NM_054032	1265	+	BC007026 AK312182 M81349 TSC_hg19_v1_chr11_-_18258350	65226	-	NM_006512 TSC_hg19_v1_chr11_-_18258385	65269	-	BC067292|MRGPRX3|117195|MAS-related GPR, member X3##NM_054031|MRGPRX3|117195|MAS-related GPR, member X3##AB489136|SAAL1|113174|serum amyloid A-like 1##BC012010|SAAL1|113174|serum amyloid A-like 1##AK123457|SAAL1|113174|serum amyloid A-like 1##NM_138421|SAAL1|113174|serum amyloid A-like 1##AY196345|TPH1|7166|tryptophan hydroxylase 1##BC106739|TPH1|7166|tryptophan hydroxylase 1##BC106740|TPH1|7166|tryptophan hydroxylase 1##X52836|TPH1|7166|tryptophan hydroxylase 1##NM_004179|TPH1|7166|tryptophan hydroxylase 1##BC095509|MRGPRX4|117196|MAS-related GPR, member X4##NM_054032|MRGPRX4|117196|MAS-related GPR, member X4##BC007026|SAA4|6291|serum amyloid A4, constitutive##AK312182|SAA4|6291|serum amyloid A4, constitutive##M81349|SAA4|6291|serum amyloid A4, constitutive##NM_006512|SAA4|6291|serum amyloid A4, constitutive	0.011412	
chr12	57850030	57850164	reg1015923.p1	8.613	+	TSC_hg19_v1_chr12_+_57849089 NM_031479 AK075285 BC005161 AF412024	-999	+	TSC_hg19_v1_chr12_+_57828511 AK314849 BC020693 NM_005538 X82540 BC130324 BC130326 AB590801	-21534	+	AB023219 AX775761 AX775763 TSC_hg19_v1_chr12_-_57824797	-25285	-	AK297899 NM_001160045 NM_001167609 NM_005269 X07384 AB239135 AB239136	3845	+	AK301095 AK057573 AB030239 NM_001080156	21582	-	TSC_hg19_v1_chr12_-_57873391 AK092763 AX747713 NM_001080157	23297	-	NM_031479|INHBE|83729|inhibin, beta E##AK075285|INHBE|83729|inhibin, beta E##BC005161|INHBE|83729|inhibin, beta E##AF412024|INHBE|83729|inhibin, beta E##AK314849|INHBC|3626|inhibin, beta C##BC020693|INHBC|3626|inhibin, beta C##NM_005538|INHBC|3626|inhibin, beta C##BC130324|INHBC|3626|inhibin, beta C##BC130326|INHBC|3626|inhibin, beta C##AB023219|R3HDM2|22864|R3H domain containing 2##AX775761|R3HDM2|22864|R3H domain containing 2##AX775763|R3HDM2|22864|R3H domain containing 2##AK297899|GLI1|2735|GLI family zinc finger 1##NM_001160045|GLI1|2735|GLI family zinc finger 1##NM_001167609|GLI1|2735|GLI family zinc finger 1##NM_005269|GLI1|2735|GLI family zinc finger 1##X07384|GLI1|2735|GLI family zinc finger 1##AB239135|GLI1|2735|GLI family zinc finger 1##AB239136|GLI1|2735|GLI family zinc finger 1##AK301095|ARHGAP9|64333|Rho GTPase activating protein 9##AK057573|ARHGAP9|64333|Rho GTPase activating protein 9##AB030239|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080156|ARHGAP9|64333|Rho GTPase activating protein 9##AK092763|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9	1.012351	CTCF.p2:6:0.990
chr17	71994892	71994995	reg1015461.p2	8.613	+	NM_001144952	-354717	-	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-686803	-	BC157870 NM_001129885	-736925	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	204872	+	TSC_hg19_v1_chr17_+_72199849 BC000603	204910	+	TSC_hg19_v1_chr17_+_72209709 NM_032646 BC107492 BC107602 AK315163 AF319952 BC005168	214726	+	NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38##NM_032646|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107492|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107602|TTYH2|94015|tweety homolog 2 (Drosophila)##AK315163|TTYH2|94015|tweety homolog 2 (Drosophila)##AF319952|TTYH2|94015|tweety homolog 2 (Drosophila)##BC005168|TTYH2|94015|tweety homolog 2 (Drosophila)	0.849682	CTCF.p2:0:0.850
chr6	160075692	160075821	reg1015577.p2	8.613	+	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	-485326	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-609655	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-654535	-	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	38494	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	38606	-	TSC_hg19_v1_chr6_+_160148149 AK290854 AF374416 NM_004906 NM_152858 BC000383 BC004432 BC069192	72416	+	DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial##AK290854|WTAP|9589|Wilms tumor 1 associated protein##AF374416|WTAP|9589|Wilms tumor 1 associated protein##NM_004906|WTAP|9589|Wilms tumor 1 associated protein##NM_152858|WTAP|9589|Wilms tumor 1 associated protein##BC000383|WTAP|9589|Wilms tumor 1 associated protein##BC004432|WTAP|9589|Wilms tumor 1 associated protein##BC069192|WTAP|9589|Wilms tumor 1 associated protein	0.992141	CTCF.p2:9:0.992
chr11	67777169	67777292	reg1016508.p1	8.612	+	TSC_hg19_v1_chr11_+_67776039 EF411198 NM_001161473	-1199	+	TSC_hg19_v1_chr11_-_67771527 BC101568 BC105104 BC025669 AJ422142 AJ271326 BC092472 BC033623 NM_030930	-5663	-	TSC_hg19_v1_chr11_-_67572800 BC063712 BC110365	-204478	-	TSC_hg19_v1_chr11_+_67777790 NM_000694 NM_001030010 BC002553 AK291505	560	+	TSC_hg19_v1_chr11_+_67777796 AK092029 AX747322 U10868 BC013584 BC033099	585	+	TSC_hg19_v1_chr11_+_67798158 AK302449 NM_002496 AK223114 BC119753 BC119754 AK314546 U65579 AK002110	20928	+	EF411198|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001161473|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##BC101568|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC105104|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC025669|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ422142|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ271326|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC092472|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC033623|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##NM_030930|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC063712|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC110365|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##NM_000694|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001030010|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##BC002553|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##AK291505|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##AK092029|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##U10868|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##BC013584|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##BC033099|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##AK302449|NDUFS8|4728|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)##NM_002496|NDUFS8|4728|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)##AK223114|NDUFS8|4728|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)##BC119753|NDUFS8|4728|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)##BC119754|NDUFS8|4728|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)##AK314546|NDUFS8|4728|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)##U65579|NDUFS8|4728|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)##AK002110|NDUFS8|4728|NADH dehydrogenase (ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q reductase)	0.662451	CTCF.p2:-20:0.662
chr3	137511621	137511740	reg1014628.p2	8.612	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	-28533	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-834850	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-862343	+	AK098474 NM_001002026 AF349452	205999	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	217323	+	AK057406 NM_001170538	320641	-	NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18##AK057406|DZIP1L|199221|DAZ interacting protein 1-like##NM_001170538|DZIP1L|199221|DAZ interacting protein 1-like	0.0	
chr14	51750141	51750288	reg1015471.p1	8.611	+	NM_030755 AB048246 TSC_hg19_v1_chr14_+_51706980 AK302416 BC036460 BC016769 BC050366 AK075395 BC032834 AK303134 AL080080 BC056874 AY358640 AK312905 DQ891674 DQ894860 CU690352	-43265	+	NM_015163 NM_052978	-187793	-	TSC_hg19_v1_chr14_-_51562045 AK055388	-188161	-	AL833158 NM_001042481	205640	+	TSC_hg19_v1_chr14_+_52118627 BX161430 NM_152330 BC020521 AK315764 AK055545 BX647863	368416	+	NM_001243773 NM_001243774 NM_053064 AK092371	576862	+	NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1##AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1##BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1##BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1##BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1##AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1##BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1##AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1##AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1##BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1##AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1##AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1##NM_015163|TRIM9|114088|tripartite motif containing 9##NM_052978|TRIM9|114088|tripartite motif containing 9##AK055388|TRIM9|114088|tripartite motif containing 9##AL833158|FRMD6|122786|FERM domain containing 6##NM_001042481|FRMD6|122786|FERM domain containing 6##BX161430|FRMD6|122786|FERM domain containing 6##NM_152330|FRMD6|122786|FERM domain containing 6##BC020521|FRMD6|122786|FERM domain containing 6##AK315764|FRMD6|122786|FERM domain containing 6##AK055545|FRMD6|122786|FERM domain containing 6##BX647863|FRMD6|122786|FERM domain containing 6##NM_001243773|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_001243774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	0.874423	CTCF.p2:-3:0.544	CTCF.p2:-5:0.271
chr7	82356326	82356432	reg1014288.p2	8.611	+	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	-283299	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	-283533	-	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-957005	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	435490	-	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	435857	-	AK303925 NM_001178129	914367	-	NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	0.746826	CTCF.p2:25:0.747
chr10	128437719	128437842	reg1015992.p1	8.610	+	BC140898 BC146869 AK057500 NM_001004298	-227778	-	TSC_hg19_v1_chr10_-_128077075 NM_003474 NM_021641	-360681	-	TSC_hg19_v1_chr10_-_128077062 BC060804	-360716	-	TSC_hg19_v1_chr10_+_128594020 NM_001380 BC144632 BC146857 D50857	156251	+	AK127465 NM_001039762	556641	-	NM_001030013	909832	+	BC140898|C10orf90|118611|chromosome 10 open reading frame 90##BC146869|C10orf90|118611|chromosome 10 open reading frame 90##AK057500|C10orf90|118611|chromosome 10 open reading frame 90##NM_001004298|C10orf90|118611|chromosome 10 open reading frame 90##NM_003474|ADAM12|8038|ADAM metallopeptidase domain 12##NM_021641|ADAM12|8038|ADAM metallopeptidase domain 12##BC060804|ADAM12|8038|ADAM metallopeptidase domain 12##NM_001380|DOCK1|1793|dedicator of cytokinesis 1##BC144632|DOCK1|1793|dedicator of cytokinesis 1##BC146857|DOCK1|1793|dedicator of cytokinesis 1##D50857|DOCK1|1793|dedicator of cytokinesis 1##AK127465|FAM196A|642938|family with sequence similarity 196, member A##NM_001039762|FAM196A|642938|family with sequence similarity 196, member A##NM_001030013|NPS|594857|neuropeptide S	0.999728	CTCF.p2:22:1.000
chr3	197632973	197633108	reg1015359.p1	8.610	+	TSC_hg19_v1_chr3_+_197518134 AK300466 AK303521 BC007504 NM_032773 CU675675 DQ893268 DQ896598	-114901	+	TSC_hg19_v1_chr3_+_197518124 AK293745	-114943	+	TSC_hg19_v1_chr3_+_197477223 AK302546	-155799	+	BC068973 TSC_hg19_v1_chr3_-_197676768 AK027224 NM_001134435	43735	-	BC010949 TSC_hg19_v1_chr3_+_197677063 AY871273 NM_000996 AB055768 X52966 AK026542 BC001037 BC061890 BC017093	44036	+	BC016156 TSC_hg19_v1_chr3_-_197686873 AK095094 AL136889 NM_032263	53824	-	AK300466|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##AK303521|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##BC007504|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##NM_032773|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##DQ893268|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##DQ896598|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##AK293745|LRCH3|84859|leucine-rich repeats and calponin homology (CH) domain containing 3##AK302546|FYTTD1|84248|forty-two-three domain containing 1##BC068973|IQCG|84223|IQ motif containing G##AK027224|IQCG|84223|IQ motif containing G##NM_001134435|IQCG|84223|IQ motif containing G##BC010949|RPL35A|6165|ribosomal protein L35a##AY871273|RPL35A|6165|ribosomal protein L35a##NM_000996|RPL35A|6165|ribosomal protein L35a##AB055768|RPL35A|6165|ribosomal protein L35a##X52966|RPL35A|6165|ribosomal protein L35a##AK026542|RPL35A|6165|ribosomal protein L35a##BC001037|RPL35A|6165|ribosomal protein L35a##BC061890|RPL35A|6165|ribosomal protein L35a##BC017093|RPL35A|6165|ribosomal protein L35a##BC016156|IQCG|84223|IQ motif containing G##AK095094|IQCG|84223|IQ motif containing G##AL136889|IQCG|84223|IQ motif containing G##NM_032263|IQCG|84223|IQ motif containing G	0.970812	CTCF.p2:-11:0.954
chr3	38044970	38045078	reg1013702.p1	8.610	+	TSC_hg19_v1_chr3_+_38035642 AK309304	-9362	+	NM_015873	-9947	+	TSC_hg19_v1_chr3_+_38032276 BC004300	-12748	+	TSC_hg19_v1_chr3_-_38066000 AK090774 AX746610	21006	-	NM_001130964	21253	-	AB385114 BC056157 AB209862 U09117 BC050382 AK098690 AK127813 AK292324 NM_006225 TSC_hg19_v1_chr3_-_38071155	26068	-	AK309304|VILL|50853|villin-like##NM_015873|VILL|50853|villin-like##BC004300|VILL|50853|villin-like##AK090774|PLCD1|5333|phospholipase C, delta 1##NM_001130964|PLCD1|5333|phospholipase C, delta 1##AB209862|PLCD1|5333|phospholipase C, delta 1##U09117|PLCD1|5333|phospholipase C, delta 1##BC050382|PLCD1|5333|phospholipase C, delta 1##AK098690|PLCD1|5333|phospholipase C, delta 1##AK127813|PLCD1|5333|phospholipase C, delta 1##AK292324|PLCD1|5333|phospholipase C, delta 1##NM_006225|PLCD1|5333|phospholipase C, delta 1	0.990586	CTCF.p2:9:0.991
chr7	99679481	99679617	reg1015197.p2	8.610	+	TSC_hg19_v1_chr7_-_99679347 BC011887 BC025265 BC013603 AK297625 AF193057 AF217988 AK315479 AK091984 AX747291 NM_017715 NM_032924	-222	-	NM_145914 TSC_hg19_v1_chr7_+_99647416 CR749301 BC047309 AK301871	-32119	+	AK075324 TSC_hg19_v1_chr7_+_99647394 AK292267 AK313884	-32151	+	BC041695 TSC_hg19_v1_chr7_-_99680201	638	-	AK309719 TSC_hg19_v1_chr7_-_99680369	819	-	TSC_hg19_v1_chr7_+_99686591 NM_006833 AK312024	7031	+	BC011887|ZNF3|7551|zinc finger protein 3##BC025265|ZNF3|7551|zinc finger protein 3##BC013603|ZNF3|7551|zinc finger protein 3##AK297625|ZNF3|7551|zinc finger protein 3##AF193057|ZNF3|7551|zinc finger protein 3##AF217988|ZNF3|7551|zinc finger protein 3##AK315479|ZNF3|7551|zinc finger protein 3##AK091984|ZNF3|7551|zinc finger protein 3##NM_017715|ZNF3|7551|zinc finger protein 3##NM_032924|ZNF3|7551|zinc finger protein 3##NM_145914|ZSCAN21|7589|zinc finger and SCAN domain containing 21##CR749301|ZSCAN21|7589|zinc finger and SCAN domain containing 21##BC047309|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK301871|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK075324|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK292267|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK313884|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK309719|ZNF3|7551|zinc finger protein 3##NM_006833|COPS6|10980|COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis)##AK312024|COPS6|10980|COP9 constitutive photomorphogenic homolog subunit 6 (Arabidopsis)	0.999568	CTCF.p2:18:1.000
chrX	53858544	53858653	reg1014157.p2	8.610	+	TSC_hg19_v1_chrX_-_53713665 BC018750 BC038184 DQ097177 NM_031407 AK056671	-144921	-	TSC_hg19_v1_chrX_-_53629608 AB071605	-228984	-	CR456723 TSC_hg19_v1_chrX_-_53461318 AF069134 BC008708 BC000372 BC000829 U73514 AF035555 U96132 NM_001037811 NM_004493	-397292	-	BC042108 NM_001184898	211011	-	BC053861 TSC_hg19_v1_chrX_-_54070368	211742	-	TSC_hg19_v1_chrX_-_54070423 AK304272 CR933612	211833	-	BC018750|HUWE1|10075|HECT, UBA and WWE domain containing 1##BC038184|HUWE1|10075|HECT, UBA and WWE domain containing 1##DQ097177|HUWE1|10075|HECT, UBA and WWE domain containing 1##NM_031407|HUWE1|10075|HECT, UBA and WWE domain containing 1##AK056671|HUWE1|10075|HECT, UBA and WWE domain containing 1##AB071605|HUWE1|10075|HECT, UBA and WWE domain containing 1##CR456723|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AF069134|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC008708|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC000372|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC000829|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##U73514|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AF035555|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##U96132|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##NM_001037811|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##NM_004493|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC042108|PHF8|23133|PHD finger protein 8##NM_001184898|PHF8|23133|PHD finger protein 8##BC053861|PHF8|23133|PHD finger protein 8##AK304272|PHF8|23133|PHD finger protein 8##CR933612|PHF8|23133|PHD finger protein 8	0.894435	CTCF.p2:-10:0.894
chr8	8056581	8056695	reg1015243.p1	8.609	+	AK292586 NM_001193630	-272780	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-304434	+	AF295370 AJ237673 NM_018661 AB037972 AB590071 AF217245 AF516673	-317713	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	29504	+	TSC_hg19_v1_chr8_-_8175862 AF075060	119250	-	AK122582 NM_001080826	182584	-	AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF295370|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2	0.994859	CTCF.p2:16:0.995
chr1	68001209	68001344	reg1017430.p1	8.608	+	TSC_hg19_v1_chr1_-_67896101 NM_001018067 NM_001018068 NM_001018069 NM_015640	-105159	-	BX647139 TSC_hg19_v1_chr1_-_67896097	-105179	-	TSC_hg19_v1_chr1_-_67896086 AK312256	-105191	-	TSC_hg19_v1_chr1_+_68150883 AK314991 NM_001199741 NM_001199742 NM_001924 M60974 BC011757 DQ008445 EF581092 EF614238	149634	+	TSC_hg19_v1_chr1_+_68151094 AB463698 AM393439 DQ893229 DQ896558	149858	+	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	296712	+	NM_001018067|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018068|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018069|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_015640|SERBP1|26135|SERPINE1 mRNA binding protein 1##BX647139|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK312256|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AM393439|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ893229|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ896558|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AK124028|LOC100289178|100289178|uncharacterized LOC100289178	0.129016	
chr17	56596070	56596210	reg1017008.p1	8.608	+	AF264717 TSC_hg19_v1_chr17_-_56595226 BC035609 NM_004687	-897	-	TSC_hg19_v1_chr17_-_56591953 AK308877	-4198	-	BC115385 BC115386 BC033017 BC033020 NM_001080439 TSC_hg19_v1_chr17_-_56565791	-30391	-	CR457111 D89278 AK091065 AX746762 AB002110 AF073312 U88829 BC128255 BC128515 AB008753 AK315045 BC142968 TSC_hg19_v1_chr17_-_56606678	10467	-	AK314528 TSC_hg19_v1_chr17_-_56606712 NM_004574	10603	-	BC018055 TSC_hg19_v1_chr17_-_56609363	13222	-	AF264717|MTMR4|9110|myotubularin related protein 4##BC035609|MTMR4|9110|myotubularin related protein 4##NM_004687|MTMR4|9110|myotubularin related protein 4##AK308877|MTMR4|9110|myotubularin related protein 4##BC115385|HSF5|124535|heat shock transcription factor family member 5##BC115386|HSF5|124535|heat shock transcription factor family member 5##BC033017|HSF5|124535|heat shock transcription factor family member 5##BC033020|HSF5|124535|heat shock transcription factor family member 5##NM_001080439|HSF5|124535|heat shock transcription factor family member 5##CR457111|SEPT4|5414|septin 4##D89278|SEPT4|5414|septin 4##AK091065|SEPT4|5414|septin 4##AB002110|SEPT4|5414|septin 4##AF073312|SEPT4|5414|septin 4##U88829|SEPT4|5414|septin 4##BC128255|SEPT4|5414|septin 4##BC128515|SEPT4|5414|septin 4##AB008753|SEPT4|5414|septin 4##AK315045|SEPT4|5414|septin 4##BC142968|SEPT4|5414|septin 4##AK314528|SEPT4|5414|septin 4##NM_004574|SEPT4|5414|septin 4##BC018055|SEPT4|5414|septin 4	0.152254	
chr19	36984136	36984270	reg1015771.p2	8.608	+	TSC_hg19_v1_chr19_-_36980764 BX649070	-3418	-	TSC_hg19_v1_chr19_+_36980528 AK298140	-3666	+	AK027685 NM_032838 AK074497 TSC_hg19_v1_chr19_-_36980464 AK316262 AK299393 NM_001145343 NM_001145344 NM_001145345	-3803	-	BC042676 AK291442 NM_001012756 NM_001166036 NM_001166037 NM_001166038	35005	-	TSC_hg19_v1_chr19_-_37064192 BC064690 AK025110	79944	-	TSC_hg19_v1_chr19_-_37064195 NM_020951	80001	-	BX649070|ZNF566|84924|zinc finger protein 566##AK298140|LOC728752|728752|uncharacterized LOC728752##AK027685|ZNF566|84924|zinc finger protein 566##NM_032838|ZNF566|84924|zinc finger protein 566##AK074497|ZNF566|84924|zinc finger protein 566##AK316262|ZNF566|84924|zinc finger protein 566##AK299393|ZNF566|84924|zinc finger protein 566##NM_001145343|ZNF566|84924|zinc finger protein 566##NM_001145344|ZNF566|84924|zinc finger protein 566##NM_001145345|ZNF566|84924|zinc finger protein 566##BC042676|ZNF260|339324|zinc finger protein 260##AK291442|ZNF260|339324|zinc finger protein 260##NM_001012756|ZNF260|339324|zinc finger protein 260##NM_001166036|ZNF260|339324|zinc finger protein 260##NM_001166037|ZNF260|339324|zinc finger protein 260##NM_001166038|ZNF260|339324|zinc finger protein 260##BC064690|ZNF529|57711|zinc finger protein 529##AK025110|ZNF529|57711|zinc finger protein 529##NM_020951|ZNF529|57711|zinc finger protein 529	0.830069	CTCF.p2:5:0.830
chr3	152161945	152162083	reg1014995.p2	8.608	+	AY358260 NM_001123228	-103236	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-144821	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	-174669	-	NM_002563 Z49205	390721	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	718012	+	TSC_hg19_v1_chr3_+_152880058 BC012362	718034	+	AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family	0.454019	CTCF.p2:4:0.454
chr5	62074895	62075017	reg1015704.p2	8.608	+	AK123022 NM_181506 BX649157 AY358733 BC110838 AY280614	-200318	+	AK302781 NM_001134779	-360246	+	TSC_hg19_v1_chr5_+_61708589 NM_016338 AK001696 BC033776	-366332	+	AF498978 BC069159 NM_000524 AB464441 BC136263 TSC_hg19_v1_chr5_-_63257719 AK291429 AK311460	1182706	-	AK314187 TSC_hg19_v1_chr5_-_63258084	1183066	-	TSC_hg19_v1_chr5_+_63461666 AK090756 AX746601 NM_001113561 NM_178532 BC101277 BC101278 BC101279 AL832580 BC101397	1386725	+	AK123022|LRRC70|100130733|leucine rich repeat containing 70##NM_181506|LRRC70|100130733|leucine rich repeat containing 70##AY358733|LRRC70|100130733|leucine rich repeat containing 70##BC110838|LRRC70|100130733|leucine rich repeat containing 70##AY280614|LRRC70|100130733|leucine rich repeat containing 70##AK302781|IPO11|51194|importin 11##NM_001134779|IPO11|51194|importin 11##NM_016338|IPO11|51194|importin 11##AK001696|IPO11|51194|importin 11##BC033776|IPO11|51194|importin 11##AF498978|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC069159|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_000524|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC136263|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK291429|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK090756|RNF180|285671|ring finger protein 180##NM_001113561|RNF180|285671|ring finger protein 180##NM_178532|RNF180|285671|ring finger protein 180##BC101277|RNF180|285671|ring finger protein 180##BC101278|RNF180|285671|ring finger protein 180##BC101279|RNF180|285671|ring finger protein 180##AL832580|RNF180|285671|ring finger protein 180##BC101397|RNF180|285671|ring finger protein 180	0.898399	CTCF.p2:15:0.898
chr8	145792701	145792809	reg1016625.p1	8.608	+	AK092501 AX747574 TSC_hg19_v1_chr8_-_145770830	-21999	-	BC064829 BC036712 TSC_hg19_v1_chr8_-_145754451 BC064373 NM_001001795 BC073936	-38322	-	TSC_hg19_v1_chr8_-_145752408 BC111067 NM_001024678	-40345	-	AB051475 NM_025251	46132	-	TSC_hg19_v1_chr8_-_145911232 AK296353	118472	-	TSC_hg19_v1_chr8_-_145980846 AK000435	188099	-	AK092501|ARHGAP39|80728|Rho GTPase activating protein 39##BC064829|C8orf82|414919|chromosome 8 open reading frame 82##BC064373|C8orf82|414919|chromosome 8 open reading frame 82##NM_001001795|C8orf82|414919|chromosome 8 open reading frame 82##BC073936|C8orf82|414919|chromosome 8 open reading frame 82##BC111067|LRRC24|441381|leucine rich repeat containing 24##NM_001024678|LRRC24|441381|leucine rich repeat containing 24##AB051475|ARHGAP39|80728|Rho GTPase activating protein 39##NM_025251|ARHGAP39|80728|Rho GTPase activating protein 39##AK296353|ARHGAP39|80728|Rho GTPase activating protein 39##AK000435|ZNF251|90987|zinc finger protein 251	0.830068	CTCF.p2:-7:0.830
chr8	85517074	85517220	reg1017653.p1	8.608	+	NM_001100391 BC031090	-420043	+	TSC_hg19_v1_chr8_+_85095702 AK095026	-421412	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	-421604	+	AK300234 NM_033402 TSC_hg19_v1_chr8_+_86019350	502200	+	TSC_hg19_v1_chr8_+_86019442 BC030701 BC070092 AK056185 AK300874 AK302648 AK307350 AK307636 AK307443	502322	+	NM_001083588 NM_001951 U31556 TSC_hg19_v1_chr8_+_86089622 Z78409 X86097	572474	+	NM_001100391|RALYL|138046|RALY RNA binding protein-like##BC031090|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK300234|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_033402|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC030701|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC070092|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK056185|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK300874|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK302648|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307350|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307636|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307443|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_001083588|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001951|E2F5|1875|E2F transcription factor 5, p130-binding##U31556|E2F5|1875|E2F transcription factor 5, p130-binding##Z78409|E2F5|1875|E2F transcription factor 5, p130-binding##X86097|E2F5|1875|E2F transcription factor 5, p130-binding	0.932293	CTCF.p2:7:0.932
chr12	3886498	3886617	reg1014189.p2	8.607	+	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-24175	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-24289	-	AK125333 TSC_hg19_v1_chr12_-_3601984	-284572	-	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	95943	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	496487	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	543834	+	AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5	0.335253	CTCF.p2:6:0.335
chr8	127313346	127313466	reg1017969.p1	8.607	+	TSC_hg19_v1_chr8_-_126963395 BX648371	-349993	-	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-870827	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-1209309	+	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	257149	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	257318	-	DQ486513 NM_001159542	1114450	+	BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B	0.160401	
chr8	85538501	85538651	reg1012486.p1	8.607	+	NM_001100391 BC031090	-441472	+	TSC_hg19_v1_chr8_+_85095702 AK095026	-442841	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	-443033	+	AK300234 NM_033402 TSC_hg19_v1_chr8_+_86019350	480771	+	TSC_hg19_v1_chr8_+_86019442 BC030701 BC070092 AK056185 AK300874 AK302648 AK307350 AK307636 AK307443	480893	+	NM_001083588 NM_001951 U31556 TSC_hg19_v1_chr8_+_86089622 Z78409 X86097	551045	+	NM_001100391|RALYL|138046|RALY RNA binding protein-like##BC031090|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK300234|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_033402|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC030701|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC070092|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK056185|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK300874|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK302648|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307350|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307636|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307443|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_001083588|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001951|E2F5|1875|E2F transcription factor 5, p130-binding##U31556|E2F5|1875|E2F transcription factor 5, p130-binding##Z78409|E2F5|1875|E2F transcription factor 5, p130-binding##X86097|E2F5|1875|E2F transcription factor 5, p130-binding	0.86731	CTCF.p2:-64:0.867
chr1	160016632	160016752	reg1014690.p1	8.606	+	AB028127 TSC_hg19_v1_chr1_-_160001781 BC019865 AK074655 BC011395 NM_145167	-14938	-	CU676470 TSC_hg19_v1_chr1_-_160001654 BC001803	-15096	-	BC074754 BC070213 AY358801 AF275725 AY034613 NM_001146172 NM_001146173 NM_033438	-92690	-	BC131627 BC034036 AK312383 TSC_hg19_v1_chr1_-_160040009 U52155 NM_002241	23306	-	TSC_hg19_v1_chr1_+_160051343 NM_004983 U52152 BC117516 BC117517 BC117518 BC117519	34670	+	AB590475 TSC_hg19_v1_chr1_-_160068277 AY157579 AF311906 AY044845	51605	-	AB028127|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC019865|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AK074655|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC011395|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##NM_145167|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC001803|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC074754|SLAMF9|89886|SLAM family member 9##BC070213|SLAMF9|89886|SLAM family member 9##AY358801|SLAMF9|89886|SLAM family member 9##AF275725|SLAMF9|89886|SLAM family member 9##AY034613|SLAMF9|89886|SLAM family member 9##NM_001146172|SLAMF9|89886|SLAM family member 9##NM_001146173|SLAMF9|89886|SLAM family member 9##NM_033438|SLAMF9|89886|SLAM family member 9##BC131627|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##BC034036|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##AK312383|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##U52155|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##NM_002241|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##NM_004983|KCNJ9|3765|potassium inwardly-rectifying channel, subfamily J, member 9##U52152|KCNJ9|3765|potassium inwardly-rectifying channel, subfamily J, member 9##AY157579|IGSF8|93185|immunoglobulin superfamily, member 8##AF311906|IGSF8|93185|immunoglobulin superfamily, member 8##AY044845|IGSF8|93185|immunoglobulin superfamily, member 8	0.928074	CTCF.p2:-35:0.928
chr11	71554	71672	reg1018159.p1	8.606	+	None	None	None	None	None	None	None	None	None	AY026938 BC069287 NM_001097610 NM_145651 BC111427 BC111433 AB590098 AM392647 AM393773 AM393805	121475	+	NM_053280 AY713299 AL133658	125164	+	EU832497 EU832578 TSC_hg19_v1_chr11_-_207355	135738	-	AY026938|SCGB1C1|147199|secretoglobin, family 1C, member 1##BC069287|SCGB1C1|147199|secretoglobin, family 1C, member 1##NM_001097610|LOC653486|653486|secretoglobin, family 1C, member 1-like##NM_145651|SCGB1C1|147199|secretoglobin, family 1C, member 1##BC111427|SCGB1C1|147199|secretoglobin, family 1C, member 1##BC111433|SCGB1C1|147199|secretoglobin, family 1C, member 1##AM392647|SCGB1C1|147199|secretoglobin, family 1C, member 1##AM393773|SCGB1C1|147199|secretoglobin, family 1C, member 1##AM393805|SCGB1C1|147199|secretoglobin, family 1C, member 1##NM_053280|ODF3|113746|outer dense fiber of sperm tails 3##AY713299|ODF3|113746|outer dense fiber of sperm tails 3##AL133658|ODF3|113746|outer dense fiber of sperm tails 3##EU832497|BET1L|51272|blocked early in transport 1 homolog (S. cerevisiae)-like##EU832578|BET1L|51272|blocked early in transport 1 homolog (S. cerevisiae)-like	0.283133	CTCF.p2:17:0.283
chr12	124516945	124517079	reg1015775.p2	8.606	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-59283	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-59813	-	NM_207437	-269971	+	AK126577 NM_181709	256697	+	TSC_hg19_v1_chr12_-_125002875 BC033087	485847	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	535063	-	AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##NM_207437|DNAH10|196385|dynein, axonemal, heavy chain 10##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2	0.840723	CTCF.p2:0:0.841
chr18	31902768	31902912	reg1014609.p2	8.606	+	AB017800 NM_001198546 NM_001198548 NM_003787	-99326	-	AK297185 BC000313 TSC_hg19_v1_chr18_-_31803319	-99597	-	NM_001198547	-100407	-	TSC_hg19_v1_chr18_+_32073264 NM_001198945 NM_001392 NM_032975 NM_032979 AK294746 U26742	170424	+	AJ009668 TSC_hg19_v1_chr18_+_32073374	170523	+	NM_001128175 NM_001198938 NM_001198939 NM_001198940 AK308410 AL833285 BC005300 AB209102	270464	+	AB017800|NOL4|8715|nucleolar protein 4##NM_001198546|NOL4|8715|nucleolar protein 4##NM_001198548|NOL4|8715|nucleolar protein 4##NM_003787|NOL4|8715|nucleolar protein 4##AK297185|NOL4|8715|nucleolar protein 4##BC000313|NOL4|8715|nucleolar protein 4##NM_001198547|NOL4|8715|nucleolar protein 4##NM_001198945|DTNA|1837|dystrobrevin, alpha##NM_001392|DTNA|1837|dystrobrevin, alpha##NM_032975|DTNA|1837|dystrobrevin, alpha##NM_032979|DTNA|1837|dystrobrevin, alpha##AK294746|DTNA|1837|dystrobrevin, alpha##U26742|DTNA|1837|dystrobrevin, alpha##AJ009668|DTNA|1837|dystrobrevin, alpha##NM_001128175|DTNA|1837|dystrobrevin, alpha##NM_001198938|DTNA|1837|dystrobrevin, alpha##NM_001198939|DTNA|1837|dystrobrevin, alpha##NM_001198940|DTNA|1837|dystrobrevin, alpha##AK308410|DTNA|1837|dystrobrevin, alpha##AL833285|DTNA|1837|dystrobrevin, alpha##BC005300|DTNA|1837|dystrobrevin, alpha##AB209102|DTNA|1837|dystrobrevin, alpha	0.658384	CTCF.p2:8:0.658
chr2	238490473	238490612	reg1014890.p2	8.606	+	AB015419 BC069081 BC069284 NM_015893	-15326	+	TSC_hg19_v1_chr2_+_238395893 NM_001042467 NM_024101 AK296745 AK022207 AK292929 AK310821 AK225381 BC001653 BC051269	-94646	+	TSC_hg19_v1_chr2_-_238322840 NM_004369 NM_057164 NM_057165 NM_057166 NM_057167	-167698	-	TSC_hg19_v1_chr2_-_238499327 BC009827 BC050426 AL136645	8804	-	BC023661 AK225423 AK022600 NM_022449	9198	-	TSC_hg19_v1_chr2_+_238536229 NM_001137550 AF115510	45817	+	AB015419|PRLH|51052|prolactin releasing hormone##BC069081|PRLH|51052|prolactin releasing hormone##BC069284|PRLH|51052|prolactin releasing hormone##NM_015893|PRLH|51052|prolactin releasing hormone##NM_001042467|MLPH|79083|melanophilin##NM_024101|MLPH|79083|melanophilin##AK296745|MLPH|79083|melanophilin##AK022207|MLPH|79083|melanophilin##AK292929|MLPH|79083|melanophilin##AK310821|MLPH|79083|melanophilin##AK225381|MLPH|79083|melanophilin##BC001653|MLPH|79083|melanophilin##BC051269|MLPH|79083|melanophilin##NM_004369|COL6A3|1293|collagen, type VI, alpha 3##NM_057164|COL6A3|1293|collagen, type VI, alpha 3##NM_057165|COL6A3|1293|collagen, type VI, alpha 3##NM_057166|COL6A3|1293|collagen, type VI, alpha 3##NM_057167|COL6A3|1293|collagen, type VI, alpha 3##BC009827|RAB17|64284|RAB17, member RAS oncogene family##BC050426|RAB17|64284|RAB17, member RAS oncogene family##AL136645|RAB17|64284|RAB17, member RAS oncogene family##BC023661|RAB17|64284|RAB17, member RAS oncogene family##AK225423|RAB17|64284|RAB17, member RAS oncogene family##AK022600|RAB17|64284|RAB17, member RAS oncogene family##NM_022449|RAB17|64284|RAB17, member RAS oncogene family##NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	0.094784	
chr3	26754031	26754149	reg1014989.p1	8.606	+	BC067784 TSC_hg19_v1_chr3_+_26664296 AF396933 NM_052953	-89790	+	TSC_hg19_v1_chr3_+_25831590 NM_001145391 NM_017897 AK000611 AK304821 AK225260 BC008202	-922510	+	AK296047 NM_001145294	-922578	-	TSC_hg19_v1_chr3_-_27410884 AK123061 NM_199347	656823	-	AF047033 AF089726 NM_003615	744154	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	771735	-	BC067784|LRRC3B|116135|leucine rich repeat containing 3B##AF396933|LRRC3B|116135|leucine rich repeat containing 3B##NM_052953|LRRC3B|116135|leucine rich repeat containing 3B##NM_001145391|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##NM_017897|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK000611|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK304821|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK225260|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##BC008202|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK296047|NGLY1|55768|N-glycanase 1##NM_001145294|NGLY1|55768|N-glycanase 1##AK123061|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##NM_199347|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7	0.99313	CTCF.p2:24:0.993
chr1	117610528	117610652	reg1015877.p1	8.605	+	TSC_hg19_v1_chr1_+_117602948 AF073771 NM_003594 AF080255 BC015341 BC030058	-7636	+	AK291017 TSC_hg19_v1_chr1_+_117602939	-7666	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	-66185	+	AK023243 AK222901 BC034943 AY669488 NM_001145635 NM_025188	53789	-	AK303466 NM_001253849	135867	-	AY280972 DQ103757 AB590614 BC074729 AY346100 AY358352 AK026071 AK225413 AK310812 AY442303 BC065717 BX648021 DQ836392 NM_001253850 NM_024626	142938	-	AF073771|TTF2|8458|transcription termination factor, RNA polymerase II##NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II##AF080255|TTF2|8458|transcription termination factor, RNA polymerase II##BC015341|TTF2|8458|transcription termination factor, RNA polymerase II##BC030058|TTF2|8458|transcription termination factor, RNA polymerase II##AK291017|TTF2|8458|transcription termination factor, RNA polymerase II##AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule##AK023243|TRIM45|80263|tripartite motif containing 45##AK222901|TRIM45|80263|tripartite motif containing 45##BC034943|TRIM45|80263|tripartite motif containing 45##AY669488|TRIM45|80263|tripartite motif containing 45##NM_001145635|TRIM45|80263|tripartite motif containing 45##NM_025188|TRIM45|80263|tripartite motif containing 45##AK303466|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253849|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY280972|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ103757|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC074729|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY346100|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY358352|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK026071|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK225413|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK310812|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY442303|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC065717|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BX648021|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ836392|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253850|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_024626|VTCN1|79679|V-set domain containing T cell activation inhibitor 1	0.984064	CTCF.p2:-3:0.984
chr17	59436297	59436446	reg1015051.p1	8.605	+	TSC_hg19_v1_chr17_+_58755255 NM_001099432 NM_017679 AK304791 AK225757 BC017390 AK314744 AF361219 BC117275 BC143386 BC143387 AK025510	-681158	+	TSC_hg19_v1_chr17_+_58677710 BC016480 BC042418 BC032826 BC033893 DQ891047 EU176552 BT009780	-758682	+	TSC_hg19_v1_chr17_+_58677553 BC060877 NM_003620 AK312902 AK299773 U78305	-758827	+	TSC_hg19_v1_chr17_+_59477203 BC052566 NM_005994 AK127429 BC070054	40865	+	TSC_hg19_v1_chr17_+_59477477 U28049	41125	+	TSC_hg19_v1_chr17_+_59477713 AL832900 AB209378	41346	+	NM_001099432|BCAS3|54828|breast carcinoma amplified sequence 3##NM_017679|BCAS3|54828|breast carcinoma amplified sequence 3##AK304791|BCAS3|54828|breast carcinoma amplified sequence 3##AK225757|BCAS3|54828|breast carcinoma amplified sequence 3##BC017390|BCAS3|54828|breast carcinoma amplified sequence 3##AK314744|BCAS3|54828|breast carcinoma amplified sequence 3##AF361219|BCAS3|54828|breast carcinoma amplified sequence 3##BC117275|BCAS3|54828|breast carcinoma amplified sequence 3##BC143386|BCAS3|54828|breast carcinoma amplified sequence 3##BC143387|BCAS3|54828|breast carcinoma amplified sequence 3##AK025510|BCAS3|54828|breast carcinoma amplified sequence 3##BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC052566|TBX2|6909|T-box 2##NM_005994|TBX2|6909|T-box 2##BC070054|TBX2|6909|T-box 2##U28049|TBX2|6909|T-box 2##AL832900|TBX2|6909|T-box 2##AB209378|TBX2|6909|T-box 2	0.969863	CTCF.p2:0:0.970
chr17	75241469	75241588	reg1023236.p1	8.605	+	AK293206 NM_001144001	-60234	+	TSC_hg19_v1_chr17_+_75137104 AK290913 BC142979 BC136523 BC136525	-104393	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	-104494	+	NM_001113491 AF189713 TSC_hg19_v1_chr17_+_75277583 AJ312323 AK300270 AK300268 BC054004	36014	+	AK290368 NM_001113492 TSC_hg19_v1_chr17_+_75283980	42451	+	TSC_hg19_v1_chr17_+_75315629 AJ312321 NM_006640	74082	+	AK293206|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001144001|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AK290913|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC142979|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136523|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136525|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001113491|SEPT9|10801|septin 9##AF189713|SEPT9|10801|septin 9##AJ312323|SEPT9|10801|septin 9##AK300270|SEPT9|10801|septin 9##AK300268|SEPT9|10801|septin 9##BC054004|SEPT9|10801|septin 9##AK290368|SEPT9|10801|septin 9##NM_001113492|SEPT9|10801|septin 9##AJ312321|SEPT9|10801|septin 9##NM_006640|SEPT9|10801|septin 9	0.0	
chr3	31490137	31490243	reg1015876.p2	8.604	+	AL832766 NM_207359	-554038	-	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-841787	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-842168	+	TSC_hg19_v1_chr3_+_31574119 AK311488	83940	+	TSC_hg19_v1_chr3_+_31574468 AK074587	84259	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	84292	+	AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.836667	CTCF.p2:0:0.837
chr4	7772234	7772346	reg1015954.p1	8.604	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	-335634	-	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-577895	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-702489	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	169098	-	TSC_hg19_v1_chr4_-_8073714 AK094798	301426	-	TSC_hg19_v1_chr4_-_8129388 AK301060	357095	-	BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2	0.646781	CTCF.p2:-5:0.647
chr9	141020784	141020964	reg1012899.p1	8.604	+	TSC_hg19_v1_chr9_+_140918045 AB209467	-102800	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	-248640	+	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	-382345	+	TSC_hg19_v1_chr9_+_141044539 AK308459	23677	+	NM_001145249	85762	+	None	None	None	AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK308459|TUBBP5|643224|tubulin, beta pseudogene 5##NM_001145249|FAM157B|100132403|family with sequence similarity 157, member B	2.99712	CTCF.p2:-5:0.999	CTCF.p2:55:0.999	CTCF.p2:-66:0.999
chrX	46545621	46545721	reg1014237.p2	8.603	+	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	-112393	+	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	-140727	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	-140815	-	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	72858	-	TSC_hg19_v1_chrX_-_46618608 BC094742	72959	-	NM_006915 AJ007590 TSC_hg19_v1_chrX_+_46696391 BC027851	150706	+	NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##BC094742|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	0.999396	CTCF.p2:0:0.999
chr10	16851423	16851574	reg1016337.p1	8.602	+	NM_001010908	-287495	-	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	-372513	+	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	-949007	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	7861	-	TSC_hg19_v1_chr10_-_16859397 AK225681 AK312520	7896	-	TSC_hg19_v1_chr10_-_16859451 BC015644 BC005993 BC107898 BX647733 NM_012425 NM_152724	7937	-	NM_001010908|C1QL3|389941|complement component 1, q subcomponent-like 3##AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1##AK225681|RSU1|6251|Ras suppressor protein 1##AK312520|RSU1|6251|Ras suppressor protein 1##BC015644|RSU1|6251|Ras suppressor protein 1##BC005993|RSU1|6251|Ras suppressor protein 1##BC107898|RSU1|6251|Ras suppressor protein 1##BX647733|RSU1|6251|Ras suppressor protein 1##NM_012425|RSU1|6251|Ras suppressor protein 1##NM_152724|RSU1|6251|Ras suppressor protein 1	0.34391	CTCF.p2:24:0.344
chr10	65632221	65632335	reg1015746.p1	8.602	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-351037	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-351116	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-351163	+	NM_178011 BX640611 AY358315 BC111492	3053537	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	3793118	-	AF091606 AK313882 NM_013266	3823659	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.878969	CTCF.p2:-7:0.879
chr1	206804545	206804697	reg1017043.p1	8.602	+	TSC_hg19_v1_chr1_-_206785905 NM_001201478 NM_006893	-18738	-	DQ891590 DQ894784 TSC_hg19_v1_chr1_-_206785812 BC039134 BC058905 AK225259 BC001585 AF220417 AF262403 AK294536 AK001852	-18866	-	TSC_hg19_v1_chr1_+_206730897 CU692112 EU831661	-73724	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	4223	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	4489	+	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	53850	+	NM_001201478|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_006893|EIF2D|1939|eukaryotic translation initiation factor 2D##DQ891590|EIF2D|1939|eukaryotic translation initiation factor 2D##DQ894784|EIF2D|1939|eukaryotic translation initiation factor 2D##BC039134|EIF2D|1939|eukaryotic translation initiation factor 2D##BC058905|EIF2D|1939|eukaryotic translation initiation factor 2D##AK225259|EIF2D|1939|eukaryotic translation initiation factor 2D##BC001585|EIF2D|1939|eukaryotic translation initiation factor 2D##AF220417|EIF2D|1939|eukaryotic translation initiation factor 2D##AF262403|EIF2D|1939|eukaryotic translation initiation factor 2D##AK294536|EIF2D|1939|eukaryotic translation initiation factor 2D##AK001852|EIF2D|1939|eukaryotic translation initiation factor 2D##EU831661|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2	0.971802	CTCF.p2:-16:0.972
chr16	30965100	30965232	reg1015827.p1	8.602	+	TSC_hg19_v1_chr16_+_30960437 AK298276 BC006126 BC016150 BC022786	-4719	+	TSC_hg19_v1_chr16_+_30960425 BC015555	-4745	+	TSC_hg19_v1_chr16_+_30960389 NM_152288	-4774	+	AB002337 NM_014712	3448	+	TSC_hg19_v1_chr16_+_30969464 BC108673	4371	+	TSC_hg19_v1_chr16_+_30996538 NM_001142777 NM_001142778 NM_025193 AK057436 BC004929 AK290950 AK292068	31363	+	AK298276|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC006126|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC016150|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC022786|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC015555|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##NM_152288|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##AB002337|SETD1A|9739|SET domain containing 1A##NM_014712|SETD1A|9739|SET domain containing 1A##NM_001142777|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##NM_001142778|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##NM_025193|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##AK057436|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##BC004929|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##AK290950|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##AK292068|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7	0.959613	CTCF.p2:-22:0.960
chr16	32944140	32944265	reg1014892.p1	8.602	+	AK300387 TSC_hg19_v1_chr16_+_32752635	-191566	+	AL133588 NM_016212	-256150	-	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	-256769	-	AL133588 NM_016212	260777	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	261396	+	AL133588 NM_016212	317312	+	AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3	0.998857	CTCF.p2:28:0.999
chr11	74952802	74952905	reg1013936.p1	8.601	+	NM_001195528	-904	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	-82012	+	NM_001145212 NM_007256 FM209050 TSC_hg19_v1_chr11_+_74862151 AK304783 AK302492 AK290234 AK300134 AB020687 BC127254 BC041095 AB026256 AL117465	-90709	+	AF084040 AF084940 FJ348262 CU678548 AB462955 TSC_hg19_v1_chr11_-_75062708 AK289718 BC003636 NM_004041 NM_020251	109963	-	TSC_hg19_v1_chr11_+_75110562 D28344 AK130960 BC034149 NM_001005 AK129794 AK313051 BC013231 BC100284 X55715 BC071917 AK223048 BC003137 BC071669 S42658 AB464166 CU678394 DQ892888 DQ896136 U14990 U14991 U14992 BC003577 BC013196 AB062288	157722	+	HQ258227 BC132708 BC132710 TSC_hg19_v1_chr11_-_75141083 AK091109 AX746783	188207	-	NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145212|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_007256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209050|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK304783|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK302492|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK290234|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK300134|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB020687|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC127254|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC041095|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB026256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AL117465|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF084040|ARRB1|408|arrestin, beta 1##AF084940|ARRB1|408|arrestin, beta 1##FJ348262|ARRB1|408|arrestin, beta 1##AK289718|ARRB1|408|arrestin, beta 1##BC003636|ARRB1|408|arrestin, beta 1##NM_004041|ARRB1|408|arrestin, beta 1##NM_020251|ARRB1|408|arrestin, beta 1##D28344|RPS3|6188|ribosomal protein S3##AK130960|RPS3|6188|ribosomal protein S3##BC034149|RPS3|6188|ribosomal protein S3##NM_001005|RPS3|6188|ribosomal protein S3##AK129794|RPS3|6188|ribosomal protein S3##AK313051|RPS3|6188|ribosomal protein S3##BC013231|RPS3|6188|ribosomal protein S3##BC100284|RPS3|6188|ribosomal protein S3##X55715|RPS3|6188|ribosomal protein S3##BC071917|RPS3|6188|ribosomal protein S3##AK223048|RPS3|6188|ribosomal protein S3##BC003137|RPS3|6188|ribosomal protein S3##BC071669|RPS3|6188|ribosomal protein S3##S42658|RPS3|6188|ribosomal protein S3##DQ892888|RPS3|6188|ribosomal protein S3##DQ896136|RPS3|6188|ribosomal protein S3##U14990|RPS3|6188|ribosomal protein S3##U14991|RPS3|6188|ribosomal protein S3##U14992|RPS3|6188|ribosomal protein S3##BC003577|RPS3|6188|ribosomal protein S3##BC013196|RPS3|6188|ribosomal protein S3##AB062288|RPS3|6188|ribosomal protein S3##HQ258227|KLHL35|283212|kelch-like 35 (Drosophila)##BC132708|KLHL35|283212|kelch-like 35 (Drosophila)##BC132710|KLHL35|283212|kelch-like 35 (Drosophila)##AK091109|KLHL35|283212|kelch-like 35 (Drosophila)	0.898203	CTCF.p2:-25:0.898
chr16	50408730	50408824	reg1014306.p1	8.601	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	-5947	-	NM_001114 D25538	-86954	+	TSC_hg19_v1_chr16_+_50308041 BC039891	-100724	+	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	173549	+	TSC_hg19_v1_chr16_-_50647562 AK124375	238801	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	306400	-	AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20	0.372609	CTCF.p2:-2:0.373
chr16	62259716	62259822	reg1014512.p1	8.601	+	AK124734 NM_001796	-189031	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-3491572	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-3541113	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	2896133	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	2896199	-	TSC_hg19_v1_chr16_-_65155987 AK297377	2896225	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.992914	CTCF.p2:-1:0.993
chr17	48894718	48894864	reg1017715.p1	8.601	+	AF147357 TSC_hg19_v1_chr17_+_48821111	-73681	+	TSC_hg19_v1_chr17_+_48796963 NM_006107 NM_016424 AK290540 AK225980 AK023672 BC047043 BC056409 BC002925 AK295983 DQ013876 AK001925	-97798	+	AK314010 CR627413 TSC_hg19_v1_chr17_-_48785180 BC012978 EU164539 NM_052855	-109648	-	NM_175575	17813	+	TSC_hg19_v1_chr17_-_48943716 BC070493 BC098415 NM_001243885 NM_005749	48905	-	AK313904 NM_001243877	50547	-	AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_006107|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_016424|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK290540|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK225980|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK023672|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC047043|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC056409|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC002925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK295983|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##DQ013876|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK001925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK314010|ANKRD40|91369|ankyrin repeat domain 40##CR627413|ANKRD40|91369|ankyrin repeat domain 40##BC012978|ANKRD40|91369|ankyrin repeat domain 40##EU164539|ANKRD40|91369|ankyrin repeat domain 40##NM_052855|ANKRD40|91369|ankyrin repeat domain 40##NM_175575|WFIKKN2|124857|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2##BC070493|TOB1|10140|transducer of ERBB2, 1##BC098415|TOB1|10140|transducer of ERBB2, 1##NM_001243885|TOB1|10140|transducer of ERBB2, 1##NM_005749|TOB1|10140|transducer of ERBB2, 1##AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1	0.996307	CTCF.p2:3:0.996
chr2	92018370	92018492	reg1015584.p1	8.601	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-170428	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-1806713	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-1940677	+	AK097438 BC021716 NM_144705 AK296678 CU692394	3518819	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	3673051	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	3769111	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.99859	CTCF.p2:-23:0.999
chr1	233613268	233613429	reg1014537.p2	8.600	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	-149765	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	-181865	-	TSC_hg19_v1_chr1_+_233086381 AF416713	-526959	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	136475	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	136571	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	427264	+	AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3	0.582092	CTCF.p2:-33:0.582
chr9	103881649	103881752	reg1014362.p2	8.600	+	NM_207299 AK303807 TSC_hg19_v1_chr9_+_103791087	-90634	+	NM_001018116 AK300099 TSC_hg19_v1_chr9_+_103340380 EU487253 BC090888	-541311	+	TSC_hg19_v1_chr9_+_103235637 BC035056 DQ891732 DQ894909	-645971	+	AK000307 AK225306 BC029380 NM_017753 TSC_hg19_v1_chr9_+_103947336	65626	+	NM_001127610 AK315347	264122	-	L34081 BC039200 BC009567 NM_001701 BC107424	265575	-	NM_207299|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK303807|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_001018116|MURC|347273|muscle-related coiled-coil protein##AK300099|MURC|347273|muscle-related coiled-coil protein##EU487253|MURC|347273|muscle-related coiled-coil protein##BC090888|MURC|347273|muscle-related coiled-coil protein##BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_001127610|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##AK315347|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##L34081|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC039200|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC009567|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##NM_001701|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC107424|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)	0.993571	CTCF.p2:-6:0.994
chr15	73853018	73853108	reg1015514.p1	8.599	+	NM_001042367 AK131030 BC055412	-117554	+	AJ238850 NM_005477	-191459	-	TSC_hg19_v1_chr15_-_73661207 AJ132429 DQ854814	-191856	-	HQ258139 TSC_hg19_v1_chr15_-_73925588 BC117462 BC143880 BC143881 AK313441 AK314248 BC030773 CR936779 AK304478 AK297184	72523	-	TSC_hg19_v1_chr15_-_73925720 BC105979 AK129908 AF109126 AF109127 AB209812 BC067828 NM_001161363 NM_001161364 NM_012428 NM_017455	72663	-	TSC_hg19_v1_chr15_+_73976549 AJ583696	123485	+	NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60##AK131030|C15orf60|283677|chromosome 15 open reading frame 60##BC055412|C15orf60|283677|chromosome 15 open reading frame 60##AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##HQ258139|NPTN|27020|neuroplastin##BC117462|NPTN|27020|neuroplastin##BC143880|NPTN|27020|neuroplastin##BC143881|NPTN|27020|neuroplastin##AK313441|NPTN|27020|neuroplastin##AK314248|NPTN|27020|neuroplastin##BC030773|NPTN|27020|neuroplastin##CR936779|NPTN|27020|neuroplastin##AK304478|NPTN|27020|neuroplastin##AK297184|NPTN|27020|neuroplastin##BC105979|NPTN|27020|neuroplastin##AK129908|NPTN|27020|neuroplastin##AF109126|NPTN|27020|neuroplastin##AF109127|NPTN|27020|neuroplastin##AB209812|NPTN|27020|neuroplastin##BC067828|NPTN|27020|neuroplastin##NM_001161363|NPTN|27020|neuroplastin##NM_001161364|NPTN|27020|neuroplastin##NM_012428|NPTN|27020|neuroplastin##NM_017455|NPTN|27020|neuroplastin	0.966848	CTCF.p2:-24:0.967
chr16	87811291	87811446	reg1002888.p1	8.599	+	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	-11798	-	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	-11853	-	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	-174658	+	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	91707	-	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	158779	-	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	173800	+	BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##BC001044|KLHDC4|54758|kelch domain containing 4##DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3##DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein	0.736954	CTCF.p2:-42:0.737
chr4	139011746	139011871	reg1015741.p1	8.598	+	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-558166	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-558216	-	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-3888890	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	151556	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	925185	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	993595	-	AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.987558	CTCF.p2:14:0.988
chr9	35696690	35696817	reg1014475.p2	8.598	+	M74817 M75165 X06825 M12125 AK304803 AK223258 AK294522 AK300249 TSC_hg19_v1_chr9_-_35689923 NM_003289 NM_213674	-6776	-	AK130045 EU106177 DQ892908 DQ896159 BC011776 TSC_hg19_v1_chr9_-_35689884	-6912	-	BC014950 EF122496 NM_001216 X66839 AJ010588 CU677133 DQ892208 DQ895404	-22850	+	TSC_hg19_v1_chr9_-_35732096 BC020881	35343	-	TSC_hg19_v1_chr9_-_35732126 AF177198	35368	-	TSC_hg19_v1_chr9_-_35732182 BC042923	35425	-	M74817|TPM2|7169|tropomyosin 2 (beta)##M75165|TPM2|7169|tropomyosin 2 (beta)##X06825|TPM2|7169|tropomyosin 2 (beta)##M12125|TPM2|7169|tropomyosin 2 (beta)##AK304803|TPM2|7169|tropomyosin 2 (beta)##AK223258|TPM2|7169|tropomyosin 2 (beta)##AK294522|TPM2|7169|tropomyosin 2 (beta)##AK300249|TPM2|7169|tropomyosin 2 (beta)##NM_003289|TPM2|7169|tropomyosin 2 (beta)##NM_213674|TPM2|7169|tropomyosin 2 (beta)##AK130045|TPM2|7169|tropomyosin 2 (beta)##EU106177|TPM2|7169|tropomyosin 2 (beta)##DQ892908|TPM2|7169|tropomyosin 2 (beta)##DQ896159|TPM2|7169|tropomyosin 2 (beta)##BC011776|TPM2|7169|tropomyosin 2 (beta)##BC014950|CA9|768|carbonic anhydrase IX##EF122496|CA9|768|carbonic anhydrase IX##NM_001216|CA9|768|carbonic anhydrase IX##X66839|CA9|768|carbonic anhydrase IX##AJ010588|CA9|768|carbonic anhydrase IX##DQ892208|CA9|768|carbonic anhydrase IX##DQ895404|CA9|768|carbonic anhydrase IX##BC020881|TLN1|7094|talin 1##AF177198|TLN1|7094|talin 1##BC042923|TLN1|7094|talin 1	0.0	
chr13	41351680	41351818	reg1010456.p2	8.597	+	TSC_hg19_v1_chr13_-_41345327 NM_005830	-6417	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	-6457	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	-111037	-	NM_014252 TSC_hg19_v1_chr13_+_41363596 BC002702	11840	+	TSC_hg19_v1_chr13_+_41363716 AK313602 AK296862 AF112968	11935	+	AF177333 TSC_hg19_v1_chr13_+_41363756	12017	+	NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##NM_014252|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##BC002702|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK313602|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK296862|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AF112968|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AF177333|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15	0.990362	CTCF.p2:22:0.990
chr19	5226096	5226215	reg1014985.p1	8.597	+	TSC_hg19_v1_chr19_+_5032899 CU687848	-193256	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-256982	+	NM_015015 TSC_hg19_v1_chr19_+_4969124	-257031	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	114639	-	AK098722 NM_181710 AK292251 BC017592	229271	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	396603	-	AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##NM_015015|KDM4B|23030|lysine (K)-specific demethylase 4B##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2	0.018332	
chr8	141368794	141368908	reg1016079.p1	8.597	+	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	-653569	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	-1442607	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-1859745	-	AB067469 TSC_hg19_v1_chr8_-_141467841	98974	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	99007	-	AK128755 NM_031466	99826	-	AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9##AK128755|TRAPPC9|83696|trafficking protein particle complex 9##NM_031466|TRAPPC9|83696|trafficking protein particle complex 9	0.69055	CTCF.p2:0:0.691
chr14	66870047	66870169	reg1013003.p1	8.596	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-990383	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-990620	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-990782	-	AB037806 AF272663 NM_001024218 NM_020806	104016	+	TSC_hg19_v1_chr14_+_66974859 AK025169	104745	+	TSC_hg19_v1_chr14_+_66974870 AK315569	104761	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.989531	CTCF.p2:10:0.990
chr2	71775893	71776038	reg1016481.p1	8.596	+	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-82072	+	NM_001130976 NM_001130977 NM_001130978 NM_001130979 NM_001130980 NM_001130981 NM_003494 AF075575 BC171803 EU515155 EU515156 EU515157 EU515158 EU515159 EU515160	-95164	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	-217068	+	AK295683 TSC_hg19_v1_chr2_-_72371202	595234	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	598977	-	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	1277139	-	DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130976|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130977|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130978|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130979|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130980|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130981|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_003494|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AF075575|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##BC171803|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515155|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515156|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515157|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515158|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515159|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515160|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B	0.966908	CTCF.p2:-7:0.967
chr3	13025819	13025949	reg1014118.p2	8.595	+	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	-16776	-	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	-84276	-	BC011514 BC070209 X03342 D28385 AK311909 TSC_hg19_v1_chr3_-_12883042 NM_000994 NM_001007073	-142841	-	TSC_hg19_v1_chr3_-_13057189 BC071805	31334	-	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	88714	-	AB020713 TSC_hg19_v1_chr3_-_13384784	358881	-	AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1##BC011514|RPL32|6161|ribosomal protein L32##BC070209|RPL32|6161|ribosomal protein L32##X03342|RPL32|6161|ribosomal protein L32##D28385|RPL32|6161|ribosomal protein L32##AK311909|RPL32|6161|ribosomal protein L32##NM_000994|RPL32|6161|ribosomal protein L32##NM_001007073|RPL32|6161|ribosomal protein L32##AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##AB020713|NUP210|23225|nucleoporin 210kDa	0.954846	CTCF.p2:-15:0.955
chr3	88229645	88229776	reg1016493.p1	8.595	+	AL832398 NM_173824 TSC_hg19_v1_chr3_+_88199126 BC024188 AK297719 AK313547	-30682	+	NM_001195308 BC005222	-30686	-	AF543494 NM_018293	-41449	+	AF213459 NM_005233 NM_182644 BC063282 TSC_hg19_v1_chr3_+_89156770	927011	+	M83941 AF213460 BC026247 TSC_hg19_v1_chr3_+_89156840 AK291411 AB384708	927140	+	AB590252 DQ892389 DQ895602 TSC_hg19_v1_chr3_-_93692741 Y00692 AK292994	5462966	-	AL832398|C3orf38|285237|chromosome 3 open reading frame 38##NM_173824|C3orf38|285237|chromosome 3 open reading frame 38##BC024188|C3orf38|285237|chromosome 3 open reading frame 38##AK297719|C3orf38|285237|chromosome 3 open reading frame 38##AK313547|C3orf38|285237|chromosome 3 open reading frame 38##NM_001195308|CGGBP1|8545|CGG triplet repeat binding protein 1##BC005222|CGGBP1|8545|CGG triplet repeat binding protein 1##AF543494|ZNF654|55279|zinc finger protein 654##NM_018293|ZNF654|55279|zinc finger protein 654##AF213459|EPHA3|2042|EPH receptor A3##NM_005233|EPHA3|2042|EPH receptor A3##NM_182644|EPHA3|2042|EPH receptor A3##BC063282|EPHA3|2042|EPH receptor A3##M83941|EPHA3|2042|EPH receptor A3##AF213460|EPHA3|2042|EPH receptor A3##BC026247|EPHA3|2042|EPH receptor A3##AK291411|EPHA3|2042|EPH receptor A3##DQ892389|PROS1|5627|protein S (alpha)##DQ895602|PROS1|5627|protein S (alpha)##Y00692|PROS1|5627|protein S (alpha)##AK292994|PROS1|5627|protein S (alpha)	0.99183	CTCF.p2:29:0.992
chr10	62724035	62724161	reg1017091.p1	8.594	+	BC041791 AB018283 BC032848 TSC_hg19_v1_chr10_-_62704033 NM_001242359 NM_014836 AK307630	-20146	-	TSC_hg19_v1_chr10_+_62538253 BC107750 AK291939	-185827	+	NM_001170406 AK295741 NM_001170407 NM_001786 NM_033379 X05360 Y00272 TSC_hg19_v1_chr10_+_62538235	-185935	+	AK075129 BC093035 TSC_hg19_v1_chr10_-_62761269	37142	-	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	488861	-	CR749606 NM_178505	489109	-	BC041791|RHOBTB1|9886|Rho-related BTB domain containing 1##AB018283|RHOBTB1|9886|Rho-related BTB domain containing 1##BC032848|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_001242359|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_014836|RHOBTB1|9886|Rho-related BTB domain containing 1##AK307630|RHOBTB1|9886|Rho-related BTB domain containing 1##BC107750|CDK1|983|cyclin-dependent kinase 1##AK291939|CDK1|983|cyclin-dependent kinase 1##NM_001170406|CDK1|983|cyclin-dependent kinase 1##AK295741|CDK1|983|cyclin-dependent kinase 1##NM_001170407|CDK1|983|cyclin-dependent kinase 1##NM_001786|CDK1|983|cyclin-dependent kinase 1##NM_033379|CDK1|983|cyclin-dependent kinase 1##X05360|CDK1|983|cyclin-dependent kinase 1##Y00272|CDK1|983|cyclin-dependent kinase 1##AK075129|RHOBTB1|9886|Rho-related BTB domain containing 1##BC093035|RHOBTB1|9886|Rho-related BTB domain containing 1##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26##CR749606|TMEM26|219623|transmembrane protein 26##NM_178505|TMEM26|219623|transmembrane protein 26	0.904312	CTCF.p2:9:0.904
chr13	42479863	42480006	reg1013328.p1	8.594	+	TSC_hg19_v1_chr13_+_42031690 BC038706 AF036549	-448234	+	TSC_hg19_v1_chr13_+_42031685 BC066334	-448251	+	TSC_hg19_v1_chr13_+_42031539 NM_014059	-448383	+	TSC_hg19_v1_chr13_-_42535066 AK095155	55146	-	TSC_hg19_v1_chr13_-_42535247 AB590583 BC131802 BC053674 NM_001009814 NM_015058	55255	-	AK289546 NM_001204504	134237	+	BC038706|C13orf15|28984|chromosome 13 open reading frame 15##AF036549|C13orf15|28984|chromosome 13 open reading frame 15##BC066334|C13orf15|28984|chromosome 13 open reading frame 15##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15##AK095155|KIAA0564|23078|KIAA0564##BC131802|KIAA0564|23078|KIAA0564##BC053674|KIAA0564|23078|KIAA0564##NM_001009814|KIAA0564|23078|KIAA0564##NM_015058|KIAA0564|23078|KIAA0564##AK289546|DGKH|160851|diacylglycerol kinase, eta##NM_001204504|DGKH|160851|diacylglycerol kinase, eta	0.0	
chr3	153735994	153736103	reg1011926.p1	8.594	+	AF086445 NM_001101337	-533765	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-856000	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-856022	+	AK127282 NM_001251962	102743	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	103154	+	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	306212	-	AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36	0.990609	CTCF.p2:27:0.991
chr5	31929475	31929573	reg1015863.p1	8.594	+	NM_178140	-130494	+	TSC_hg19_v1_chr5_+_31639424 AB002298	-290054	+	NM_018356 TSC_hg19_v1_chr5_+_31532398 BC032845 AK299156 AK002055 BC021215 AB527598	-397089	+	TSC_hg19_v1_chr5_+_32173523 AK055939	243992	+	TSC_hg19_v1_chr5_-_32174291 AJ296152	244744	-	TSC_hg19_v1_chr5_-_32174327 BC063586	244816	-	NM_178140|PDZD2|23037|PDZ domain containing 2##AB002298|PDZD2|23037|PDZ domain containing 2##NM_018356|C5orf22|55322|chromosome 5 open reading frame 22##BC032845|C5orf22|55322|chromosome 5 open reading frame 22##AK299156|C5orf22|55322|chromosome 5 open reading frame 22##AK002055|C5orf22|55322|chromosome 5 open reading frame 22##BC021215|C5orf22|55322|chromosome 5 open reading frame 22##AK055939|LOC153546|153546|uncharacterized LOC153546##AJ296152|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##BC063586|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)	0.958719	CTCF.p2:0:0.959
chr11	125299111	125299247	reg1015447.p2	8.593	+	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	-264553	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	-264601	+	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	-317710	-	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	66962	-	TSC_hg19_v1_chr11_+_125439294 NM_001007277 NM_004879	140116	+	TSC_hg19_v1_chr11_+_125439332 AB209820	140146	+	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_001007277|EI24|9538|etoposide induced 2.4 mRNA##NM_004879|EI24|9538|etoposide induced 2.4 mRNA##AB209820|EI24|9538|etoposide induced 2.4 mRNA	0.994576	CTCF.p2:15:0.995
chr5	127244915	127245050	reg1017795.p1	8.593	+	NM_001127385 AB219832 BC071790	-256257	+	NM_001048252 AB219764	-260259	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	-385788	+	TSC_hg19_v1_chr5_-_127418765 AF088062 BX648677 BC036629	173781	-	AK090949 AX746698 TSC_hg19_v1_chr5_-_127419417	174377	-	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	174491	+	NM_001127385|CTXN3|613212|cortexin 3##AB219832|CTXN3|613212|cortexin 3##BC071790|CTXN3|613212|cortexin 3##NM_001048252|CTXN3|613212|cortexin 3##AB219764|CTXN3|613212|cortexin 3##AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1##AF088062|FLJ33630|644873|uncharacterized LOC644873##BX648677|FLJ33630|644873|uncharacterized LOC644873##BC036629|FLJ33630|644873|uncharacterized LOC644873##AK090949|FLJ33630|644873|uncharacterized LOC644873##AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2	0.0	
chr14	101121248	101121353	reg1015864.p2	8.592	+	BC002607 NM_020836	-85170	-	AB527893 CU678064 EU832622 EU832695 NM_001159531	-86967	-	TSC_hg19_v1_chr14_+_100842812 NM_001161476 BX248767 AK291960 NM_024515 BC067872 AY295082	-278462	+	TSC_hg19_v1_chr14_+_101193228 NM_003836 AK289384 AK297918 AK313258 BC007741 BC014015	71923	+	TSC_hg19_v1_chr14_+_101193275 BC013197	71980	+	TSC_hg19_v1_chr14_+_101193330 CU675787 DQ017081 DQ126100 DQ138965 Z12172	72059	+	BC002607|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_020836|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832622|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832695|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001159531|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001161476|WDR25|79446|WD repeat domain 25##BX248767|WDR25|79446|WD repeat domain 25##AK291960|WDR25|79446|WD repeat domain 25##NM_024515|WDR25|79446|WD repeat domain 25##BC067872|WDR25|79446|WD repeat domain 25##AY295082|WDR25|79446|WD repeat domain 25##NM_003836|DLK1|8788|delta-like 1 homolog (Drosophila)##AK289384|DLK1|8788|delta-like 1 homolog (Drosophila)##AK297918|DLK1|8788|delta-like 1 homolog (Drosophila)##AK313258|DLK1|8788|delta-like 1 homolog (Drosophila)##BC007741|DLK1|8788|delta-like 1 homolog (Drosophila)##BC014015|DLK1|8788|delta-like 1 homolog (Drosophila)##BC013197|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ017081|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ126100|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ138965|DLK1|8788|delta-like 1 homolog (Drosophila)##Z12172|DLK1|8788|delta-like 1 homolog (Drosophila)	0.994062	CTCF.p2:2:0.994
chr18	30812138	30812246	reg1015499.p2	8.592	+	BC021267 AB037805 NM_020805	-459285	-	AL834491 BC121067 BC121068 AK025263 NM_001242409 NM_022751	-761772	-	TSC_hg19_v1_chr18_-_29993196 D28353	-818997	-	BC130535 BC144178 BC144179 NM_001105528	207820	-	BC062719 BC091517 AK126038 NM_198995	208467	-	BX648108 TSC_hg19_v1_chr18_-_31158297	346037	-	BC021267|KLHL14|57565|kelch-like 14 (Drosophila)##AB037805|KLHL14|57565|kelch-like 14 (Drosophila)##NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)##AL834491|FAM59A|64762|family with sequence similarity 59, member A##BC121067|FAM59A|64762|family with sequence similarity 59, member A##BC121068|FAM59A|64762|family with sequence similarity 59, member A##AK025263|FAM59A|64762|family with sequence similarity 59, member A##NM_001242409|FAM59A|64762|family with sequence similarity 59, member A##NM_022751|FAM59A|64762|family with sequence similarity 59, member A##BC130535|C18orf34|374864|chromosome 18 open reading frame 34##BC144178|C18orf34|374864|chromosome 18 open reading frame 34##BC144179|C18orf34|374864|chromosome 18 open reading frame 34##NM_001105528|C18orf34|374864|chromosome 18 open reading frame 34##BC062719|C18orf34|374864|chromosome 18 open reading frame 34##BC091517|C18orf34|374864|chromosome 18 open reading frame 34##AK126038|C18orf34|374864|chromosome 18 open reading frame 34##NM_198995|C18orf34|374864|chromosome 18 open reading frame 34	0.989482	CTCF.p2:-12:0.989
chr3	156855361	156855464	reg1010370.p2	8.592	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-311301	+	BC034397 NM_001184718	-460960	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-461997	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	22497	-	NM_020307 AK122738	23102	-	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	299238	+	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long	0.921616	CTCF.p2:-3:0.922
chr16	80560475	80560596	reg1007878.p2	8.591	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-925920	-	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-2427080	+	NM_001244755	-2497550	+	AF125108 NM_130897 BC054892 BC035232	14353	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	277512	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	479549	+	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N	0.848719	CTCF.p2:-19:0.849
chr5	8864346	8864473	reg1017321.p1	8.591	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-995099	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-995150	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-995277	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	681785	-	BC095521 NM_019599	766053	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	1385575	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.953426	CTCF.p2:-15:0.953
chr6	91791320	91791453	reg1016383.p1	8.590	+	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-494548	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-494703	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-784774	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	2337797	-	TSC_hg19_v1_chr6_-_96025325 BC047582	4233903	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	4234015	+	BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha	0.98841	CTCF.p2:-6:0.988
chr9	35603977	35604109	reg1015874.p1	8.590	+	BC129999 BC146928 BC146933 BC171840 BC171851 NM_001099951 NM_001164310	-40148	-	TSC_hg19_v1_chr9_+_35560424 BC082245 BC029647	-43576	+	TSC_hg19_v1_chr9_+_35538893 BC146654 AK294715 AK299805	-65129	+	TSC_hg19_v1_chr9_+_35605307 BC067130 NM_006285 BC038448	1260	+	TSC_hg19_v1_chr9_+_35605339 D50863	1317	+	TSC_hg19_v1_chr9_+_35605468 BC011799	1441	+	BC129999|FAM166B|730112|family with sequence similarity 166, member B##BC146928|FAM166B|730112|family with sequence similarity 166, member B##BC146933|FAM166B|730112|family with sequence similarity 166, member B##BC171840|FAM166B|730112|family with sequence similarity 166, member B##BC171851|FAM166B|730112|family with sequence similarity 166, member B##NM_001099951|FAM166B|730112|family with sequence similarity 166, member B##NM_001164310|FAM166B|730112|family with sequence similarity 166, member B##BC082245|RUSC2|9853|RUN and SH3 domain containing 2##BC029647|RUSC2|9853|RUN and SH3 domain containing 2##BC146654|RUSC2|9853|RUN and SH3 domain containing 2##AK299805|RUSC2|9853|RUN and SH3 domain containing 2##BC067130|TESK1|7016|testis-specific kinase 1##NM_006285|TESK1|7016|testis-specific kinase 1##BC038448|TESK1|7016|testis-specific kinase 1##D50863|TESK1|7016|testis-specific kinase 1##BC011799|TESK1|7016|testis-specific kinase 1	0.944183	CTCF.p2:6:0.944
chr12	96972426	96972557	reg1014715.p1	8.589	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-178174	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	-178508	-	TSC_hg19_v1_chr12_+_96588254 BC017371	-384224	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	328540	+	BC027605 NM_001135175	328752	+	TSC_hg19_v1_chr12_-_98897622 AK126817	1925136	-	AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK126817|LOC643770|643770|uncharacterized LOC643770	0.390463	CTCF.p2:10:0.390
chr1	49162922	49163031	reg1016048.p1	8.589	+	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	-225131	-	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	-225298	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	-474584	+	BC011804 AK021650 CU675869 NM_024603 BC007932	79521	-	TSC_hg19_v1_chr1_-_50489560 BC035739 AK094826 AK294394	1326571	-	TSC_hg19_v1_chr1_-_50489627 AK294633 AK296221 NM_032785	1326671	-	AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC011804|BEND5|79656|BEN domain containing 5##AK021650|BEND5|79656|BEN domain containing 5##NM_024603|BEND5|79656|BEN domain containing 5##BC007932|BEND5|79656|BEN domain containing 5##BC035739|AGBL4|84871|ATP/GTP binding protein-like 4##AK094826|AGBL4|84871|ATP/GTP binding protein-like 4##AK294394|AGBL4|84871|ATP/GTP binding protein-like 4##AK294633|AGBL4|84871|ATP/GTP binding protein-like 4##AK296221|AGBL4|84871|ATP/GTP binding protein-like 4##NM_032785|AGBL4|84871|ATP/GTP binding protein-like 4	0.999733	CTCF.p2:-14:1.000
chr17	72777110	72777234	reg1014920.p1	8.589	+	NM_017728 AK291159 TSC_hg19_v1_chr17_+_72772637 AK296621 AK000262 AK074029 BC011552 BC037278	-4516	+	AL050269 AK225602 AK312958 BC004225 AK308569 BC004195 NM_015654 TSC_hg19_v1_chr17_-_72772477 AK123115	-4701	-	TSC_hg19_v1_chr17_+_72744928 AB528945	-32218	+	AL137521 BC037584 TSC_hg19_v1_chr17_+_72832152	54936	+	BC140801 BC144586 AB208799 NM_000835	78773	-	BT006684 CU678312 AB463633 AK223530 J03826 AK098648 AK293210 AK301779 BC063493 BC002960 AK298908 AK094120 AK293208 BC018911 BC034763 BC011521 AK295307 NM_004110 NM_024417	91939	-	NM_017728|TMEM104|54868|transmembrane protein 104##AK291159|TMEM104|54868|transmembrane protein 104##AK296621|TMEM104|54868|transmembrane protein 104##AK000262|TMEM104|54868|transmembrane protein 104##AK074029|TMEM104|54868|transmembrane protein 104##BC011552|TMEM104|54868|transmembrane protein 104##BC037278|TMEM104|54868|transmembrane protein 104##AL050269|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK225602|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK312958|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##BC004225|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK308569|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##BC004195|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##NM_015654|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK123115|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AL137521|TMEM104|54868|transmembrane protein 104##BC140801|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##BC144586|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##AB208799|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##NM_000835|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##BT006684|FDXR|2232|ferredoxin reductase##AK223530|FDXR|2232|ferredoxin reductase##J03826|FDXR|2232|ferredoxin reductase##AK098648|FDXR|2232|ferredoxin reductase##AK293210|FDXR|2232|ferredoxin reductase##AK301779|FDXR|2232|ferredoxin reductase##BC063493|FDXR|2232|ferredoxin reductase##BC002960|FDXR|2232|ferredoxin reductase##AK298908|FDXR|2232|ferredoxin reductase##AK094120|FDXR|2232|ferredoxin reductase##AK293208|FDXR|2232|ferredoxin reductase##BC018911|FDXR|2232|ferredoxin reductase##BC034763|FDXR|2232|ferredoxin reductase##BC011521|FDXR|2232|ferredoxin reductase##AK295307|FDXR|2232|ferredoxin reductase##NM_004110|FDXR|2232|ferredoxin reductase##NM_024417|FDXR|2232|ferredoxin reductase	1.453454	CTCF.p2:36:0.904	CTCF.p2:-42:0.536
chr7	154719378	154719518	reg1015064.p1	8.589	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	-717063	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	-969690	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	-1135048	+	TSC_hg19_v1_chr7_+_154720213 BC033053 AK311721 AK056609 BC050402	749	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	75222	-	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	75763	+	AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##BC033053|LOC100132707|100132707|uncharacterized LOC100132707##AK311721|LOC100132707|100132707|uncharacterized LOC100132707##AK056609|LOC100132707|100132707|uncharacterized LOC100132707##BC050402|LOC100132707|100132707|uncharacterized LOC100132707##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781	0.916012	CTCF.p2:-17:0.916
chr7	1619249	1619375	reg1015148.p2	8.589	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-9491	+	AB067495 TSC_hg19_v1_chr7_+_1609735	-9579	+	TSC_hg19_v1_chr7_+_1609724 AK054665	-9599	+	NM_001128636	129485	+	TSC_hg19_v1_chr7_-_1980177 BC018870	360851	-	AK310481 TSC_hg19_v1_chr7_-_2272542	653223	-	BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AB067495|KIAA1908|114796|uncharacterized LOC114796##AK054665|KIAA1908|114796|uncharacterized LOC114796##NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.676062	CTCF.p2:-3:0.676
chr9	98670213	98670325	reg1013431.p1	8.589	+	TSC_hg19_v1_chr9_-_98638262 AF194971 AL389954	-31946	-	NM_001010895 TSC_hg19_v1_chr9_+_98637942 AK129624 AK308409 AL389953	-32328	+	TSC_hg19_v1_chr9_-_98637839 AK092137 AX747374	-32416	-	BT019371 CR541894 CU689848 DQ891812 DQ894995 BC034281 NM_000197 U05659	394140	-	TSC_hg19_v1_chr9_-_99145966 HQ258608 AB106537 AB122077 AK307890 BC100278	475662	-	NM_007001 TSC_hg19_v1_chr9_-_99145994 BC113579	475751	-	AF194971|LINC00476|100128782|long intergenic non-protein coding RNA 476##AL389954|LINC00476|100128782|long intergenic non-protein coding RNA 476##NM_001010895|C9orf102|375748|chromosome 9 open reading frame 102##AK308409|C9orf102|375748|chromosome 9 open reading frame 102##AL389953|C9orf102|375748|chromosome 9 open reading frame 102##AK092137|LINC00476|100128782|long intergenic non-protein coding RNA 476##BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##HQ258608|SLC35D2|11046|solute carrier family 35, member D2##AB106537|SLC35D2|11046|solute carrier family 35, member D2##AB122077|SLC35D2|11046|solute carrier family 35, member D2##AK307890|SLC35D2|11046|solute carrier family 35, member D2##BC100278|SLC35D2|11046|solute carrier family 35, member D2##NM_007001|SLC35D2|11046|solute carrier family 35, member D2##BC113579|SLC35D2|11046|solute carrier family 35, member D2	0.154576	
chr15	29396072	29396208	reg1015535.p1	8.588	+	NM_001130414 NM_005503 AF047348 BC082986	-182291	+	TSC_hg19_v1_chr15_+_29077475 BC018626	-318658	+	TSC_hg19_v1_chr15_+_29033278 AK302529	-362817	+	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	165830	-	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	165889	-	NM_015307	466786	-	NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1	0.988689	CTCF.p2:-8:0.989
chr17	60630599	60630741	reg1015482.p1	8.588	+	TSC_hg19_v1_chr17_+_60556483 NM_001112707 NM_006852 BC044925 AF162667 AX775745 AX775747	-74075	+	TSC_hg19_v1_chr17_+_60501257 NM_181725 BC006985 AB590991 AF161384 AK022822 AF161385	-129407	+	AK098684 NM_173503 BC101752 BC101778	-172744	+	TSC_hg19_v1_chr17_+_60704751 AB014609 BC153884 NM_006039	74087	+	BC146647 TSC_hg19_v1_chr17_+_60705048 AF134838	74375	+	TSC_hg19_v1_chr17_+_60705060 BC150212 AF107292 AB384513	74437	+	NM_001112707|TLK2|11011|tousled-like kinase 2##NM_006852|TLK2|11011|tousled-like kinase 2##BC044925|TLK2|11011|tousled-like kinase 2##AF162667|TLK2|11011|tousled-like kinase 2##NM_181725|METTL2A|339175|methyltransferase like 2A##BC006985|METTL2A|339175|methyltransferase like 2A##AF161384|METTL2A|339175|methyltransferase like 2A##AK022822|METTL2A|339175|methyltransferase like 2A##AF161385|METTL2A|339175|methyltransferase like 2A##AK098684|EFCAB3|146779|EF-hand calcium binding domain 3##NM_173503|EFCAB3|146779|EF-hand calcium binding domain 3##BC101752|EFCAB3|146779|EF-hand calcium binding domain 3##BC101778|EFCAB3|146779|EF-hand calcium binding domain 3##AB014609|MRC2|9902|mannose receptor, C type 2##BC153884|MRC2|9902|mannose receptor, C type 2##NM_006039|MRC2|9902|mannose receptor, C type 2##BC146647|MRC2|9902|mannose receptor, C type 2##AF134838|MRC2|9902|mannose receptor, C type 2##BC150212|MRC2|9902|mannose receptor, C type 2##AF107292|MRC2|9902|mannose receptor, C type 2	0.97708	CTCF.p2:-15:0.977
chr8	17191584	17191720	reg1017656.p1	8.588	+	TSC_hg19_v1_chr8_+_17104490 NM_001145152 NM_152415 AK057204 BC067754 AL834189 AY033079 AF547097 CU688328	-87084	+	TSC_hg19_v1_chr8_-_17104367 L46722 AK001209 BC007315 AF086915 AK021808 BC070187 AK225893 BC060852 AK023466 NM_013354 NM_054026	-87319	-	AL833642 TSC_hg19_v1_chr8_-_17104215	-87493	-	AK294468 HQ258354 HQ258491 BC130577 BC130579 TSC_hg19_v1_chr8_-_17270837 CR749240 AK316022 AK316283	79177	-	TSC_hg19_v1_chr8_-_17271015 NM_004686	79375	-	TSC_hg19_v1_chr8_+_17354599 NM_001008539 AK314287	162928	+	NM_001145152|VPS37A|137492|vacuolar protein sorting 37 homolog A (S. cerevisiae)##NM_152415|VPS37A|137492|vacuolar protein sorting 37 homolog A (S. cerevisiae)##AK057204|VPS37A|137492|vacuolar protein sorting 37 homolog A (S. cerevisiae)##BC067754|VPS37A|137492|vacuolar protein sorting 37 homolog A (S. cerevisiae)##AY033079|VPS37A|137492|vacuolar protein sorting 37 homolog A (S. cerevisiae)##AF547097|VPS37A|137492|vacuolar protein sorting 37 homolog A (S. cerevisiae)##L46722|CNOT7|29883|CCR4-NOT transcription complex, subunit 7##AK001209|CNOT7|29883|CCR4-NOT transcription complex, subunit 7##BC007315|CNOT7|29883|CCR4-NOT transcription complex, subunit 7##AF086915|CNOT7|29883|CCR4-NOT transcription complex, subunit 7##AK021808|CNOT7|29883|CCR4-NOT transcription complex, subunit 7##BC070187|CNOT7|29883|CCR4-NOT transcription complex, subunit 7##AK225893|CNOT7|29883|CCR4-NOT transcription complex, subunit 7##BC060852|CNOT7|29883|CCR4-NOT transcription complex, subunit 7##AK023466|CNOT7|29883|CCR4-NOT transcription complex, subunit 7##NM_013354|CNOT7|29883|CCR4-NOT transcription complex, subunit 7##NM_054026|CNOT7|29883|CCR4-NOT transcription complex, subunit 7##AL833642|CNOT7|29883|CCR4-NOT transcription complex, subunit 7##AK294468|MTMR7|9108|myotubularin related protein 7##HQ258354|MTMR7|9108|myotubularin related protein 7##HQ258491|MTMR7|9108|myotubularin related protein 7##BC130577|MTMR7|9108|myotubularin related protein 7##BC130579|MTMR7|9108|myotubularin related protein 7##CR749240|MTMR7|9108|myotubularin related protein 7##AK316022|MTMR7|9108|myotubularin related protein 7##AK316283|MTMR7|9108|myotubularin related protein 7##NM_004686|MTMR7|9108|myotubularin related protein 7##NM_001008539|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2##AK314287|SLC7A2|6542|solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	0.943788	CTCF.p2:2:0.944
chr2	23553267	23553375	reg1015912.p1	8.587	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2286392	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-2286422	-	TSC_hg19_v1_chr2_-_21266818 AB587530 HM487065 M14081 M14162 BC051278	-2286500	-	NM_052920	54976	+	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	596625	-	TSC_hg19_v1_chr2_+_24150144 BC037901	596836	+	AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##HM487065|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14081|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14162|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC051278|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A	0.0	
chr3	171547844	171547977	reg1010850.p1	8.587	+	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	-19655	-	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-369839	-	NM_000340	-803143	-	NM_001164436 AK026825	13238	+	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	209505	+	TSC_hg19_v1_chr3_+_171757437 AK127826	209524	+	AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B##AK127826|FNDC3B|64778|fibronectin type III domain containing 3B	0.721247	CTCF.p2:1:0.702
chr10	60291004	60291107	reg1015592.p1	8.586	+	TSC_hg19_v1_chr10_+_60272869 NM_001080512 AY726586	-18143	+	BC029815 TSC_hg19_v1_chr10_+_60145169 AK312558 M62810 NM_003201 BC018628 BC104482 BC126366 EU279428 HQ258758 AB451241 AB451366 AB464302 BT019658 BT019659 CR407653	-145850	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	-196219	+	TSC_hg19_v1_chr10_-_60936189 AK055418	645151	-	AL834339 NM_032439 TSC_hg19_v1_chr10_+_60936408 CR749429	645333	+	BC011268 AK054956 TSC_hg19_v1_chr10_+_60936573 AB384640 AM392743	645505	+	NM_001080512|BICC1|80114|bicaudal C homolog 1 (Drosophila)##AY726586|BICC1|80114|bicaudal C homolog 1 (Drosophila)##BC029815|TFAM|7019|transcription factor A, mitochondrial##AK312558|TFAM|7019|transcription factor A, mitochondrial##M62810|TFAM|7019|transcription factor A, mitochondrial##NM_003201|TFAM|7019|transcription factor A, mitochondrial##BC018628|TFAM|7019|transcription factor A, mitochondrial##BC104482|TFAM|7019|transcription factor A, mitochondrial##BC126366|TFAM|7019|transcription factor A, mitochondrial##EU279428|TFAM|7019|transcription factor A, mitochondrial##HQ258758|TFAM|7019|transcription factor A, mitochondrial##AB451241|TFAM|7019|transcription factor A, mitochondrial##AB451366|TFAM|7019|transcription factor A, mitochondrial##BT019658|TFAM|7019|transcription factor A, mitochondrial##BT019659|TFAM|7019|transcription factor A, mitochondrial##CR407653|TFAM|7019|transcription factor A, mitochondrial##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	0.847537	CTCF.p2:-2:0.848
chr6	150716667	150716803	reg1014372.p1	8.586	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	-26577	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-252494	+	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	-326522	-	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	204285	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	470097	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	470186	+	AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3##NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.034026	
chr4	190714304	190714425	reg1016189.p1	8.585	+	AK093499 AX748169 NM_178556 BC113860 BC114469	-1653744	+	BC111959 BC111961 BC143709 AK098667 NM_173553	-1687960	-	AK056719 AY429593 NM_174900	-1797440	+	L76159 NM_004477 AK291890 BC053997 TSC_hg19_v1_chr4_+_190862026	147643	+	TSC_hg19_v1_chr4_+_190862048 CU691066	147741	+	BC144572 AY714545 NM_001005217 NM_001199232	234039	-	AK093499|TRIML1|339976|tripartite motif family-like 1##NM_178556|TRIML1|339976|tripartite motif family-like 1##BC113860|TRIML1|339976|tripartite motif family-like 1##BC114469|TRIML1|339976|tripartite motif family-like 1##BC111959|TRIML2|205860|tripartite motif family-like 2##BC111961|TRIML2|205860|tripartite motif family-like 2##BC143709|TRIML2|205860|tripartite motif family-like 2##AK098667|TRIML2|205860|tripartite motif family-like 2##NM_173553|TRIML2|205860|tripartite motif family-like 2##AK056719|ZFP42|132625|zinc finger protein 42 homolog (mouse)##AY429593|ZFP42|132625|zinc finger protein 42 homolog (mouse)##NM_174900|ZFP42|132625|zinc finger protein 42 homolog (mouse)##L76159|FRG1|2483|FSHD region gene 1##NM_004477|FRG1|2483|FSHD region gene 1##AK291890|FRG1|2483|FSHD region gene 1##BC053997|FRG1|2483|FSHD region gene 1##BC144572|FRG2|448831|FSHD region gene 2##AY714545|FRG2|448831|FSHD region gene 2##NM_001005217|FRG2|448831|FSHD region gene 2##NM_001199232|LOC100288255|100288255|FSHD region gene 2-like	0.999854	CTCF.p2:-4:1.000
chr10	28031171	28031296	reg1015595.p2	8.584	+	TSC_hg19_v1_chr10_+_27793232 AY574034 AK295443 AK297629 AK299457 BC029350 AF087860 BC015014 NM_021252 AL136734 AK223153 AB464117 AF137372 AF498950 AK001555 AM393142 BT009840 CR533455 CU677165	-238004	+	JF332167 BC107139 AK126025 NM_001034842	-327996	-	TSC_hg19_v1_chr10_-_27531041 AK057469 AF505653 NM_001042473	-500151	-	BC036207 TSC_hg19_v1_chr10_-_28034752 AK125339 NM_001242702 NM_173576	3528	-	AK292521 TSC_hg19_v1_chr10_-_28287879 AK001679 NM_018076 BC085611	256651	-	BC038105 AK057360 NM_173496	539807	-	AY574034|RAB18|22931|RAB18, member RAS oncogene family##AK295443|RAB18|22931|RAB18, member RAS oncogene family##AK297629|RAB18|22931|RAB18, member RAS oncogene family##AK299457|RAB18|22931|RAB18, member RAS oncogene family##BC029350|RAB18|22931|RAB18, member RAS oncogene family##AF087860|RAB18|22931|RAB18, member RAS oncogene family##BC015014|RAB18|22931|RAB18, member RAS oncogene family##NM_021252|RAB18|22931|RAB18, member RAS oncogene family##AL136734|RAB18|22931|RAB18, member RAS oncogene family##AK223153|RAB18|22931|RAB18, member RAS oncogene family##AF137372|RAB18|22931|RAB18, member RAS oncogene family##AF498950|RAB18|22931|RAB18, member RAS oncogene family##AK001555|RAB18|22931|RAB18, member RAS oncogene family##AM393142|RAB18|22931|RAB18, member RAS oncogene family##BT009840|RAB18|22931|RAB18, member RAS oncogene family##CR533455|RAB18|22931|RAB18, member RAS oncogene family##JF332167|PTCHD3|374308|patched domain containing 3##BC107139|PTCHD3|374308|patched domain containing 3##AK126025|PTCHD3|374308|patched domain containing 3##NM_001034842|PTCHD3|374308|patched domain containing 3##AK057469|ACBD5|91452|acyl-CoA binding domain containing 5##AF505653|ACBD5|91452|acyl-CoA binding domain containing 5##NM_001042473|ACBD5|91452|acyl-CoA binding domain containing 5##BC036207|MKX|283078|mohawk homeobox##AK125339|MKX|283078|mohawk homeobox##NM_001242702|MKX|283078|mohawk homeobox##NM_173576|MKX|283078|mohawk homeobox##AK292521|ARMC4|55130|armadillo repeat containing 4##AK001679|ARMC4|55130|armadillo repeat containing 4##NM_018076|ARMC4|55130|armadillo repeat containing 4##BC085611|ARMC4|55130|armadillo repeat containing 4##BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	0.0	
chr11	121065543	121065680	reg1017146.p1	8.584	+	NM_005422	-92237	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	-170801	+	AB384776 NM_014619 S67803	-534584	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	97794	+	TSC_hg19_v1_chr11_+_121163484 AK096847 AK223141 AK222686	97871	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	97943	+	NM_005422|TECTA|7007|tectorin alpha##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK096847|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK223141|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK222686|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.999647	CTCF.p2:14:0.987
chr15	83199382	83199522	reg1012353.p1	8.584	+	NM_198181 CR936812	-100711	+	CR936602 NM_001164465	-181274	-	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-254562	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	9784	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	41083	-	CU690752 BC050629 NM_030594	117222	-	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	0.919612	CTCF.p2:-8:0.920
chr6	111800023	111800140	reg1015219.p1	8.584	+	TSC_hg19_v1_chr6_+_111580568 BC036115	-219509	+	NM_153369 TSC_hg19_v1_chr6_+_111580541 AK093136 AX747946 AK292735 AK315016	-219558	+	AB057445 NM_018593 BC066985 TSC_hg19_v1_chr6_+_111408810	-391286	+	BC038986 AF303220 AF157476 AF179428 AF179429 TSC_hg19_v1_chr6_-_111804167	4067	-	BC035823 TSC_hg19_v1_chr6_-_111804371	4272	-	AF071798 NM_002912 TSC_hg19_v1_chr6_-_111804420 AF058701	4343	-	BC036115|KIAA1919|91749|KIAA1919##NM_153369|KIAA1919|91749|KIAA1919##AK093136|KIAA1919|91749|KIAA1919##AK292735|KIAA1919|91749|KIAA1919##AK315016|KIAA1919|91749|KIAA1919##AB057445|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##NM_018593|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC066985|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##AF303220|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF157476|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179428|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179429|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##BC035823|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF071798|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##NM_002912|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF058701|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)	0.0	
chr2	187506593	187506714	reg1015773.p2	8.583	+	AK302990 NM_001144999	-41722	+	TSC_hg19_v1_chr2_+_187455042 EF560727 M14648 AB527165	-51626	+	TSC_hg19_v1_chr2_+_187454760 AK302550 AK309711 NM_001145000 NM_002210 AB209894 BC126231 BC136442 BC144100	-51823	+	TSC_hg19_v1_chr2_+_187558788 AK091423 AK289737 AX746973 BC060872 NM_177454 AF361495 CU687488	52123	+	AK128006 BC031094 NM_182521	207243	-	DQ280491 U17473 L76380 AK291630 AK292998 DQ280490 NM_005795	806293	-	AK302990|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##NM_001144999|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##EF560727|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##M14648|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##AK302550|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##AK309711|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##NM_001145000|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##NM_002210|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##AB209894|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##BC126231|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##BC136442|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##BC144100|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##AK091423|FAM171B|165215|family with sequence similarity 171, member B##AK289737|FAM171B|165215|family with sequence similarity 171, member B##BC060872|FAM171B|165215|family with sequence similarity 171, member B##NM_177454|FAM171B|165215|family with sequence similarity 171, member B##AF361495|FAM171B|165215|family with sequence similarity 171, member B##AK128006|ZSWIM2|151112|zinc finger, SWIM-type containing 2##BC031094|ZSWIM2|151112|zinc finger, SWIM-type containing 2##NM_182521|ZSWIM2|151112|zinc finger, SWIM-type containing 2##DQ280491|CALCRL|10203|calcitonin receptor-like##U17473|CALCRL|10203|calcitonin receptor-like##L76380|CALCRL|10203|calcitonin receptor-like##AK291630|CALCRL|10203|calcitonin receptor-like##AK292998|CALCRL|10203|calcitonin receptor-like##NM_005795|CALCRL|10203|calcitonin receptor-like	0.986613	CTCF.p2:-3:0.987
chr1	23256945	23257044	reg1012675.p2	8.582	+	TSC_hg19_v1_chr1_+_23037331 NM_004442 NM_017449 AK299701 BC067861 AB210018 AF025304 CU686595 L36643	-219571	+	NM_000491 TSC_hg19_v1_chr1_+_22979728 BC008983	-277271	+	NM_001114101 NM_172369 AK057792 TSC_hg19_v1_chr1_+_22970125 AF087892 AK226152 BC009016 AK130613	-286807	+	NM_001242521	85348	-	TSC_hg19_v1_chr1_+_23345960 NM_001009999 NM_015013	88961	+	TSC_hg19_v1_chr1_+_23345985 AB011173 BC040194 AK290328 BC048134	89054	+	NM_004442|EPHB2|2048|EPH receptor B2##NM_017449|EPHB2|2048|EPH receptor B2##AK299701|EPHB2|2048|EPH receptor B2##BC067861|EPHB2|2048|EPH receptor B2##AB210018|EPHB2|2048|EPH receptor B2##AF025304|EPHB2|2048|EPH receptor B2##L36643|EPHB2|2048|EPH receptor B2##NM_000491|C1QB|713|complement component 1, q subcomponent, B chain##BC008983|C1QB|713|complement component 1, q subcomponent, B chain##NM_001114101|C1QC|714|complement component 1, q subcomponent, C chain##NM_172369|C1QC|714|complement component 1, q subcomponent, C chain##AK057792|C1QC|714|complement component 1, q subcomponent, C chain##AF087892|C1QC|714|complement component 1, q subcomponent, C chain##AK226152|C1QC|714|complement component 1, q subcomponent, C chain##BC009016|C1QC|714|complement component 1, q subcomponent, C chain##AK130613|C1QC|714|complement component 1, q subcomponent, C chain##NM_001242521|LOC729059|729059|uncharacterized LOC729059##NM_001009999|KDM1A|23028|lysine (K)-specific demethylase 1A##NM_015013|KDM1A|23028|lysine (K)-specific demethylase 1A##AB011173|KDM1A|23028|lysine (K)-specific demethylase 1A##BC040194|KDM1A|23028|lysine (K)-specific demethylase 1A##AK290328|KDM1A|23028|lysine (K)-specific demethylase 1A##BC048134|KDM1A|23028|lysine (K)-specific demethylase 1A	0.623986	CTCF.p2:3:0.624
chr16	81515083	81515246	reg1015075.p1	8.582	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-36331	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-166514	+	TSC_hg19_v1_chr16_+_81348566 AK095378 NM_022041 AF291673	-166595	+	AY172689 NM_030629	13789	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	297733	+	TSC_hg19_v1_chr16_+_81812901 AB208914	297738	+	NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##AK095378|GAN|8139|gigaxonin##NM_022041|GAN|8139|gigaxonin##AF291673|GAN|8139|gigaxonin##AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr2	46859614	46859719	reg1015003.p1	8.582	+	TSC_hg19_v1_chr2_+_46844353 NM_014171 AK291298 AF161488 BC018653 BC006980 BC006979	-15313	+	TSC_hg19_v1_chr2_-_46844187 BC021725 BC029408 AK291108 NM_002643 NM_173074	-15449	-	BC010864 D13435 TSC_hg19_v1_chr2_-_46844167 BC039303	-15504	-	TSC_hg19_v1_chr2_+_46926049 AK290194 AK296796 AB014571 AL136896 NM_014011	66407	+	TSC_hg19_v1_chr2_+_46926340 BC032862 AF073958 NM_144949	66735	+	TSC_hg19_v1_chr2_-_47134945 M23161	275345	-	NM_014171|CRIPT|9419|cysteine-rich PDZ-binding protein##AK291298|CRIPT|9419|cysteine-rich PDZ-binding protein##AF161488|CRIPT|9419|cysteine-rich PDZ-binding protein##BC018653|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006980|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006979|CRIPT|9419|cysteine-rich PDZ-binding protein##BC021725|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##BC029408|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##AK291108|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##NM_002643|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##NM_173074|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##D13435|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##AK290194|SOCS5|9655|suppressor of cytokine signaling 5##AB014571|SOCS5|9655|suppressor of cytokine signaling 5##AL136896|SOCS5|9655|suppressor of cytokine signaling 5##NM_014011|SOCS5|9655|suppressor of cytokine signaling 5##BC032862|SOCS5|9655|suppressor of cytokine signaling 5##AF073958|SOCS5|9655|suppressor of cytokine signaling 5##NM_144949|SOCS5|9655|suppressor of cytokine signaling 5##M23161|MCFD2|90411|multiple coagulation factor deficiency 2	0.995232	CTCF.p2:4:0.995
chr9	44227397	44227503	reg1012480.p1	8.582	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-542607	+	NM_001145196	-596721	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-1093963	-	TSC_hg19_v1_chr9_+_45441926 BC006438	1214476	+	BC040528 NM_001113541 NM_015667	21282159	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	22229851	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.916062	CTCF.p2:2:0.916
chr2	130607251	130607393	reg1017152.p1	8.581	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-1531022	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-1679275	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-1758461	+	NM_032144 AL136727	129913	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	279536	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	295289	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.844502	CTCF.p2:11:0.845
chr12	57856582	57856677	reg1012817.p2	8.580	+	AK297899 NM_001160045 NM_001167609 NM_005269 X07384 AB239135 AB239136	-2687	+	TSC_hg19_v1_chr12_+_57849089 NM_031479 AK075285 BC005161 AF412024	-7531	+	TSC_hg19_v1_chr12_+_57828511 AK314849 BC020693 NM_005538 X82540 BC130324 BC130326 AB590801	-28066	+	AK301095 AK057573 AB030239 NM_001080156	15050	-	TSC_hg19_v1_chr12_-_57873391 AK092763 AX747713 NM_001080157	16765	-	AK304107 AB051853 NM_032496	17001	-	AK297899|GLI1|2735|GLI family zinc finger 1##NM_001160045|GLI1|2735|GLI family zinc finger 1##NM_001167609|GLI1|2735|GLI family zinc finger 1##NM_005269|GLI1|2735|GLI family zinc finger 1##X07384|GLI1|2735|GLI family zinc finger 1##AB239135|GLI1|2735|GLI family zinc finger 1##AB239136|GLI1|2735|GLI family zinc finger 1##NM_031479|INHBE|83729|inhibin, beta E##AK075285|INHBE|83729|inhibin, beta E##BC005161|INHBE|83729|inhibin, beta E##AF412024|INHBE|83729|inhibin, beta E##AK314849|INHBC|3626|inhibin, beta C##BC020693|INHBC|3626|inhibin, beta C##NM_005538|INHBC|3626|inhibin, beta C##BC130324|INHBC|3626|inhibin, beta C##BC130326|INHBC|3626|inhibin, beta C##AK301095|ARHGAP9|64333|Rho GTPase activating protein 9##AK057573|ARHGAP9|64333|Rho GTPase activating protein 9##AB030239|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080156|ARHGAP9|64333|Rho GTPase activating protein 9##AK092763|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9##AK304107|ARHGAP9|64333|Rho GTPase activating protein 9##AB051853|ARHGAP9|64333|Rho GTPase activating protein 9##NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9	1.062241	CTCF.p2:-4:0.993
chr2	239266135	239266275	reg1016427.p1	8.580	+	TSC_hg19_v1_chr2_+_239229215 AB590948 CU691344 AF230877	-36947	+	TSC_hg19_v1_chr2_+_239229202 BC059174 NM_001139490 NM_015650	-37030	+	TSC_hg19_v1_chr2_+_239229037 AF242456	-37146	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	69401	+	TSC_hg19_v1_chr2_+_239335693 AF156777	69484	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	490558	+	AF230877|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##BC059174|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##NM_001139490|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##NM_015650|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##AF242456|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)	0.647711	CTCF.p2:-16:0.648
chr7	107749891	107750006	reg1016915.p1	8.580	+	AB384752 TSC_hg19_v1_chr7_-_107643594 BC113455 M61916 BX648251 AK303501 AK309921 AK307611 BC044633 BC052598 NM_002291	-106343	-	AK300077 TSC_hg19_v1_chr7_+_107531630 AK225289 AK310220 AB209703 BC018648 BC018696 J03620 AB529125 CU676276	-218292	+	J03490 TSC_hg19_v1_chr7_+_107531617 AK297508	-218332	+	BC142619 BC140804 BC144591 AF028816 AK300385 NM_007356	20844	-	AJ001057 AB385311 NM_001037132	130604	-	TSC_hg19_v1_chr7_-_108096830 BC114570 BC115736 AB002341 BX538010 AK299870 BC098401 NM_001193582 NM_001193583 NM_001193584 NM_005010	346981	-	BC113455|LAMB1|3912|laminin, beta 1##M61916|LAMB1|3912|laminin, beta 1##BX648251|LAMB1|3912|laminin, beta 1##AK303501|LAMB1|3912|laminin, beta 1##AK309921|LAMB1|3912|laminin, beta 1##AK307611|LAMB1|3912|laminin, beta 1##BC044633|LAMB1|3912|laminin, beta 1##BC052598|LAMB1|3912|laminin, beta 1##NM_002291|LAMB1|3912|laminin, beta 1##AK300077|DLD|1738|dihydrolipoamide dehydrogenase##AK225289|DLD|1738|dihydrolipoamide dehydrogenase##AK310220|DLD|1738|dihydrolipoamide dehydrogenase##AB209703|DLD|1738|dihydrolipoamide dehydrogenase##BC018648|DLD|1738|dihydrolipoamide dehydrogenase##BC018696|DLD|1738|dihydrolipoamide dehydrogenase##J03620|DLD|1738|dihydrolipoamide dehydrogenase##J03490|DLD|1738|dihydrolipoamide dehydrogenase##AK297508|DLD|1738|dihydrolipoamide dehydrogenase##BC142619|LAMB4|22798|laminin, beta 4##BC140804|LAMB4|22798|laminin, beta 4##BC144591|LAMB4|22798|laminin, beta 4##AF028816|LAMB4|22798|laminin, beta 4##AK300385|LAMB4|22798|laminin, beta 4##NM_007356|LAMB4|22798|laminin, beta 4##AJ001057|NRCAM|4897|neuronal cell adhesion molecule##NM_001037132|NRCAM|4897|neuronal cell adhesion molecule##BC114570|NRCAM|4897|neuronal cell adhesion molecule##BC115736|NRCAM|4897|neuronal cell adhesion molecule##AB002341|NRCAM|4897|neuronal cell adhesion molecule##BX538010|NRCAM|4897|neuronal cell adhesion molecule##AK299870|NRCAM|4897|neuronal cell adhesion molecule##BC098401|NRCAM|4897|neuronal cell adhesion molecule##NM_001193582|NRCAM|4897|neuronal cell adhesion molecule##NM_001193583|NRCAM|4897|neuronal cell adhesion molecule##NM_001193584|NRCAM|4897|neuronal cell adhesion molecule##NM_005010|NRCAM|4897|neuronal cell adhesion molecule	0.930376	CTCF.p2:-13:0.930
chr18	2104987	2105141	reg1016473.p1	8.579	+	NM_001117 BC093837 BC101803 S83513	-1199723	+	AK313050 NM_001099733	-1200121	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-1292761	-	AK290001 BC111020 NM_022840	466391	-	NM_006101 BC005239 TSC_hg19_v1_chr18_+_2571579 AK289396 AK313184 BC035617 BC010171	466481	+	TSC_hg19_v1_chr18_+_2571589 AF017790	466531	+	NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4##NM_006101|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC005239|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK289396|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK313184|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC035617|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC010171|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AF017790|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)	0.999458	CTCF.p2:-1:0.999
chr2	110274095	110274196	reg1015252.p1	8.579	+	NM_001099289 DQ307286	-528082	+	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	-668398	-	TSC_hg19_v1_chr2_-_109605623 AK296936	-668526	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	97336	-	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	97580	-	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	97800	+	NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##AK296936|EDAR|10913|ectodysplasin A receptor##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57	0.166258	
chrX	130937142	130937323	reg1013116.p2	8.579	+	BC137050 AB529233 NM_001004486	-259234	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-513820	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-513970	-	TSC_hg19_v1_chrX_-_130964633 AK097911	27419	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	220089	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	220408	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.994974	CTCF.p2:16:0.995
chr13	25258103	25258247	reg1015094.p1	8.578	+	AK292968 NM_001185085 NM_001676	-3627	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	-171264	-	BC040438 NM_178540 AY358145	-374458	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	80144	+	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	238794	-	TSC_hg19_v1_chr13_-_25497054 NM_018451	238894	-	AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##NM_018451|CENPJ|55835|centromere protein J	0.999867	CTCF.p2:-1:1.000
chr4	124319430	124319515	reg1016178.p1	8.578	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-1516	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-475220	+	AF019632 AK294450 NM_198041	-475332	-	AK026960 BC063856 NM_005841	1201	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	1314342	-	NM_024582	1918094	+	AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AF019632|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK294450|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_198041|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)	0.151206	
chr2	132904450	132904606	reg1015122.p2	8.576	+	BC043584 NM_214461	-345295	-	AF038169 NM_013310	-424465	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-619022	+	AK122643 NM_001508	269618	+	AY358628 BC017318 AK309849 AK075487 TSC_hg19_v1_chr2_-_133427783 AK130005 AK094501 AK123029	523175	-	NM_144586	523952	-	BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39##AY358628|LYPD1|116372|LY6/PLAUR domain containing 1##BC017318|LYPD1|116372|LY6/PLAUR domain containing 1##AK309849|LYPD1|116372|LY6/PLAUR domain containing 1##AK075487|LYPD1|116372|LY6/PLAUR domain containing 1##AK130005|LYPD1|116372|LY6/PLAUR domain containing 1##AK094501|LYPD1|116372|LY6/PLAUR domain containing 1##AK123029|LYPD1|116372|LY6/PLAUR domain containing 1##NM_144586|LYPD1|116372|LY6/PLAUR domain containing 1	0.993492	CTCF.p2:9:0.993
chr14	68551117	68551236	reg1013939.p1	8.575	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-264656	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-267877	-	AK315462 NM_152443	-382574	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	708544	-	NM_001244698 NM_004926	709454	-	NM_001244701 AB528867	711808	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.740423	CTCF.p2:-2:0.740
chr3	141193193	141193314	reg1014728.p1	8.575	+	AK311479 TSC_hg19_v1_chr3_+_141105293	-87965	+	TSC_hg19_v1_chr3_+_141087345 AK311501	-105896	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	-150197	+	TSC_hg19_v1_chr3_+_141205882 AK292016 AK301015 AF115573 D78155 D82880 NM_006506	12618	+	TSC_hg19_v1_chr3_+_141457045 NM_001201370 NM_014245 NM_183237	263816	+	TSC_hg19_v1_chr3_+_141457129 AK311982	263867	+	AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK292016|RASA2|5922|RAS p21 protein activator 2##AK301015|RASA2|5922|RAS p21 protein activator 2##AF115573|RASA2|5922|RAS p21 protein activator 2##D78155|RASA2|5922|RAS p21 protein activator 2##D82880|RASA2|5922|RAS p21 protein activator 2##NM_006506|RASA2|5922|RAS p21 protein activator 2##NM_001201370|RNF7|9616|ring finger protein 7##NM_014245|RNF7|9616|ring finger protein 7##NM_183237|RNF7|9616|ring finger protein 7##AK311982|RNF7|9616|ring finger protein 7	0.985813	CTCF.p2:-1:0.986
chr3	15440477	15440580	reg1013558.p2	8.575	+	BC006169 NM_001018009	-57641	-	TSC_hg19_v1_chr3_-_15374094 AL117422 AK313167 NM_004844	-66431	-	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	-66587	-	TSC_hg19_v1_chr3_-_15469037 BC022400 AK057791 NM_152396 AK293370	28490	-	TSC_hg19_v1_chr3_+_15469073 NM_033083 AK312330 AK304697 BC041329 AF272973 CU691982	28640	+	AK128401 NM_080538	99850	-	BC006169|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_001018009|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AL117422|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AK313167|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_004844|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC022400|METTL6|131965|methyltransferase like 6##AK057791|METTL6|131965|methyltransferase like 6##NM_152396|METTL6|131965|methyltransferase like 6##AK293370|METTL6|131965|methyltransferase like 6##NM_033083|EAF1|85403|ELL associated factor 1##AK312330|EAF1|85403|ELL associated factor 1##AK304697|EAF1|85403|ELL associated factor 1##BC041329|EAF1|85403|ELL associated factor 1##AF272973|EAF1|85403|ELL associated factor 1##AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	0.792418	CTCF.p2:6:0.792
chr6	166142929	166143046	reg1014303.p1	8.575	+	AY203946 TSC_hg19_v1_chr6_-_166076051	-66935	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	-67291	-	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	-419895	-	TSC_hg19_v1_chr6_-_166401424 AK289375	258446	-	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	258547	-	BC098425 NM_003181	439142	-	AY203946|LOC100132188|100132188|LP7097##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AK289375|LINC00473|90632|long intergenic non-protein coding RNA 473##BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)	0.953138	CTCF.p2:4:0.953
chr7	5490416	5490562	reg1014712.p2	8.575	+	NM_001080495	-27313	-	AY129022 TSC_hg19_v1_chr7_-_5461555	-28948	-	TSC_hg19_v1_chr7_-_5460842 BC140723	-29583	-	CU692902 TSC_hg19_v1_chr7_-_5553380 AK057042 BC006426 BC024256 NM_024963	62862	-	TSC_hg19_v1_chr7_-_5553435 AK130444 AK294949	62938	-	M28424 V00478 TSC_hg19_v1_chr7_-_5567980 HQ154074 DQ407611 EF036500	77523	-	NM_001080495|TNRC18|84629|trinucleotide repeat containing 18##AY129022|TNRC18|84629|trinucleotide repeat containing 18##AK057042|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC006426|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC024256|FBXL18|80028|F-box and leucine-rich repeat protein 18##NM_024963|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK130444|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK294949|FBXL18|80028|F-box and leucine-rich repeat protein 18##M28424|ACTB|60|actin, beta##V00478|ACTB|60|actin, beta##DQ407611|ACTB|60|actin, beta##EF036500|ACTB|60|actin, beta	0.997288	CTCF.p2:12:0.997
chr14	73698717	73698820	reg1015890.p2	8.574	+	AJ008005 TSC_hg19_v1_chr14_+_73603214	-95556	+	TSC_hg19_v1_chr14_+_73603184 L42110	-95588	+	TSC_hg19_v1_chr14_+_73603160 BC011729	-95608	+	NM_173462 TSC_hg19_v1_chr14_+_73704238 BC042057 BC136623 BC144315	5483	+	BX248775 TSC_hg19_v1_chr14_-_73925232 BX647137 AF171938 AF171939 AF171940 AF171941 BX248073 AF015040 AK315130 BC020788	226464	-	TSC_hg19_v1_chr14_-_73925274 BX248781	226499	-	AJ008005|PSEN1|5663|presenilin 1##L42110|PSEN1|5663|presenilin 1##BC011729|PSEN1|5663|presenilin 1##NM_173462|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BC042057|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BC136623|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BC144315|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BX248775|NUMB|8650|numb homolog (Drosophila)##BX647137|NUMB|8650|numb homolog (Drosophila)##AF171938|NUMB|8650|numb homolog (Drosophila)##AF171939|NUMB|8650|numb homolog (Drosophila)##AF171940|NUMB|8650|numb homolog (Drosophila)##AF171941|NUMB|8650|numb homolog (Drosophila)##BX248073|NUMB|8650|numb homolog (Drosophila)##AF015040|NUMB|8650|numb homolog (Drosophila)##AK315130|NUMB|8650|numb homolog (Drosophila)##BC020788|NUMB|8650|numb homolog (Drosophila)##BX248781|NUMB|8650|numb homolog (Drosophila)	0.021347	
chr5	142092785	142092912	reg1012912.p1	8.573	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-15277	-	M74028 NM_033136 AK312301	-26823	-	M60516 NM_000800	-27229	-	TSC_hg19_v1_chr5_+_142149971 BC068555	57124	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	57460	+	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	689975	-	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##M74028|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033136|FGF1|2246|fibroblast growth factor 1 (acidic)##AK312301|FGF1|2246|fibroblast growth factor 1 (acidic)##M60516|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.998901	CTCF.p2:-4:0.999
chr14	71034731	71034828	reg1014402.p2	8.572	+	BC025378 NM_003814	-33048	-	NM_003813	-115906	+	AB527912 TSC_hg19_v1_chr14_-_70883770 BC007704 AK002133 AK311719 NM_001202547 NM_001202548 NM_001202549 NM_018373	-151023	-	AB463868 BT006831 CR541697 TSC_hg19_v1_chr14_-_71067367	32581	-	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	32598	-	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	73830	+	BC025378|ADAM20|8748|ADAM metallopeptidase domain 20##NM_003814|ADAM20|8748|ADAM metallopeptidase domain 20##NM_003813|ADAM21|8747|ADAM metallopeptidase domain 21##BC007704|SYNJ2BP|55333|synaptojanin 2 binding protein##AK002133|SYNJ2BP|55333|synaptojanin 2 binding protein##AK311719|SYNJ2BP|55333|synaptojanin 2 binding protein##NM_001202547|SYNJ2BP-COX16|100529257|SYNJ2BP-COX16 readthrough##NM_001202548|SYNJ2BP-COX16|100529257|SYNJ2BP-COX16 readthrough##NM_001202549|SYNJ2BP-COX16|100529257|SYNJ2BP-COX16 readthrough##NM_018373|SYNJ2BP|55333|synaptojanin 2 binding protein##BT006831|MED6|10001|mediator complex subunit 6##CR541697|MED6|10001|mediator complex subunit 6##AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9	0.628718	CTCF.p2:2:0.629
chr3	52506102	52506225	reg1014463.p1	8.572	+	TSC_hg19_v1_chr3_+_52489646 BC056900	-16514	+	TSC_hg19_v1_chr3_+_52489645 AK297657 AK315001 BC038102 AK291398 BC054494 AF082516 BC050552 AK027428	-16532	+	TSC_hg19_v1_chr3_+_52489516 NM_007184	-16650	+	TSC_hg19_v1_chr3_+_52529355 NM_015136	23190	+	BC150250 D87433 AB052956 AB052957 TSC_hg19_v1_chr3_+_52529384 AJ275213 DQ786774 AB384451	23235	+	TSC_hg19_v1_chr3_-_52567787 NM_001134231	61590	-	BC056900|NISCH|11188|nischarin##AK297657|NISCH|11188|nischarin##AK315001|NISCH|11188|nischarin##BC038102|NISCH|11188|nischarin##AK291398|NISCH|11188|nischarin##BC054494|NISCH|11188|nischarin##AF082516|NISCH|11188|nischarin##BC050552|NISCH|11188|nischarin##AK027428|NISCH|11188|nischarin##NM_007184|NISCH|11188|nischarin##NM_015136|STAB1|23166|stabilin 1##BC150250|STAB1|23166|stabilin 1##D87433|STAB1|23166|stabilin 1##AB052956|STAB1|23166|stabilin 1##AB052957|STAB1|23166|stabilin 1##AJ275213|STAB1|23166|stabilin 1##DQ786774|STAB1|23166|stabilin 1##NM_001134231|NT5DC2|64943|5'-nucleotidase domain containing 2	0.979989	CTCF.p2:-7:0.980
chr10	13203306	13203424	reg1014524.p1	8.571	+	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	-61220	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	-159666	-	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-811588	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	203	+	BC018068 NM_145314	72962	-	NM_001037537	138380	-	NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10##BC018068|UCMA|221044|upper zone of growth plate and cartilage matrix associated##NM_145314|UCMA|221044|upper zone of growth plate and cartilage matrix associated##NM_001037537|PHYH|5264|phytanoyl-CoA 2-hydroxylase	0.950956	CTCF.p2:-7:0.951
chr7	152033984	152034119	reg1014799.p2	8.570	+	TSC_hg19_v1_chr7_+_151722852 AK025287	-311199	+	TSC_hg19_v1_chr7_+_151722826 AK298911	-311219	+	TSC_hg19_v1_chr7_+_151722782 NM_022087	-311254	+	TSC_hg19_v1_chr7_-_152133040 AY024361	98941	-	TSC_hg19_v1_chr7_-_152133074 NM_170606	99030	-	TSC_hg19_v1_chr7_+_152161285 BC036622	127188	+	AK025287|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)##AK298911|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)##NM_022087|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)##AY024361|MLL3|58508|myeloid/lymphoid or mixed-lineage leukemia 3##NM_170606|MLL3|58508|myeloid/lymphoid or mixed-lineage leukemia 3##BC036622|LOC100128822|100128822|uncharacterized LOC100128822	0.891267	CTCF.p2:-3:0.891
chr17	8897673	8897820	reg1015346.p1	8.569	+	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	-28765	-	AY725853 AF128881 NM_014308	-81930	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-126762	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	27221	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	581385	-	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	581460	-	AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8	0.035345	
chrX	65091775	65091945	reg1017031.p1	8.569	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	-204212	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	-204313	+	NM_002444 TSC_hg19_v1_chrX_+_64887520	-204343	+	TSC_hg19_v1_chrX_+_65235302 DQ680071 DQ680072	143431	+	DQ891770 DQ894953 BC010525 AJ132502 AK293215 AK298389 AK075153 AK297050 AK301417 AK075171 NM_001100431 NM_001184830 NM_001184831 NM_007268	168042	-	NM_138737 TSC_hg19_v1_chrX_+_65382512	290615	+	AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##NM_002444|MSN|4478|moesin##DQ891770|VSIG4|11326|V-set and immunoglobulin domain containing 4##DQ894953|VSIG4|11326|V-set and immunoglobulin domain containing 4##BC010525|VSIG4|11326|V-set and immunoglobulin domain containing 4##AJ132502|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK293215|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK298389|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075153|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK297050|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK301417|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075171|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001100431|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184830|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184831|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_007268|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_138737|HEPH|9843|hephaestin	0.980687	CTCF.p2:11:0.981
chr19	5548016	5548082	reg1014243.p1	8.568	+	AK098722 NM_181710 AK292251 BC017592	-92623	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	-207255	-	TSC_hg19_v1_chr19_+_5032899 CU687848	-515150	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	74709	-	TSC_hg19_v1_chr19_-_5622794 NM_014649	74816	-	NM_001201338 NM_001201339 NM_001201340 NM_002967 TSC_hg19_v1_chr19_+_5623093 AK294718	75023	+	AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2##NM_014649|SAFB2|9667|scaffold attachment factor B2##NM_001201338|SAFB|6294|scaffold attachment factor B##NM_001201339|SAFB|6294|scaffold attachment factor B##NM_001201340|SAFB|6294|scaffold attachment factor B##NM_002967|SAFB|6294|scaffold attachment factor B##AK294718|SAFB|6294|scaffold attachment factor B	0.28095	CTCF.p2:-23:0.281
chr10	103600676	103600803	reg1000289.p4	8.567	+	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	-1127	-	TSC_hg19_v1_chr10_-_103578213 NM_001142434 NM_012215	-22521	-	TSC_hg19_v1_chr10_-_103578192 BC032591	-22553	-	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	2868	-	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	215173	-	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	224403	+	DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##NM_001142434|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##NM_012215|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC032591|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6	0.0	
chr11	32469884	32469995	reg1015900.p2	8.567	+	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	-12870	-	TSC_hg19_v1_chr11_-_32456950 BC046461	-13000	-	AK093168 BC032861 NM_001198551 NM_001198552	-17579	-	TSC_hg19_v1_chr11_+_32605343 AK312512	135401	+	TSC_hg19_v1_chr11_+_32605376 AK131064 AK292139 AK304378 AK001768 AK300002 AF064603 BC051292 BC011937 BC019103 NM_006360 AK222564 AK307121 CU676384 AY769947 CR450300 DQ185042	135459	+	BC146800 AK131470 NM_001008391 BC062749	346238	-	X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1##BC046461|WT1|7490|Wilms tumor 1##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1##AK312512|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK131064|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK292139|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK304378|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK001768|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK300002|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AF064603|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC051292|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC011937|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC019103|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##NM_006360|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK222564|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK307121|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AY769947|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##CR450300|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##DQ185042|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC146800|CCDC73|493860|coiled-coil domain containing 73##AK131470|CCDC73|493860|coiled-coil domain containing 73##NM_001008391|CCDC73|493860|coiled-coil domain containing 73##BC062749|CCDC73|493860|coiled-coil domain containing 73	0.020981	
chr13	108302579	108302699	reg1016009.p1	8.567	+	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	-1082154	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	-1115290	-	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-2184048	+	NM_001080396	216820	-	NM_002312 X83441	564490	-	AK292419 AK314844 BC037491 NM_206937	565236	-	BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A##NM_002312|LIG4|3981|ligase IV, DNA, ATP-dependent##X83441|LIG4|3981|ligase IV, DNA, ATP-dependent##AK292419|LIG4|3981|ligase IV, DNA, ATP-dependent##AK314844|LIG4|3981|ligase IV, DNA, ATP-dependent##BC037491|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_206937|LIG4|3981|ligase IV, DNA, ATP-dependent	1.733249	CTCF.p2:-8:0.737	CTCF.p2:18:0.997
chr3	149654636	149654768	reg1015047.p1	8.567	+	BC009781 BC009803 TSC_hg19_v1_chr3_+_149531012 AF037204 AF070558 BC017878	-123672	+	TSC_hg19_v1_chr3_+_149530987 AK313304	-123716	+	TSC_hg19_v1_chr3_+_149530500 NM_007282 NM_183381 AK090638	-124225	+	TSC_hg19_v1_chr3_-_149688683 AB464068 AF228738 EU832616 EU832688 AK311782 L10678 BC002964 BC095444 AK307227 AK311780 BC018049 AK297915 NM_002628 NM_053024	33994	-	TSC_hg19_v1_chr3_-_149688960 BC043646	34227	-	BC012363 TSC_hg19_v1_chr3_+_149689094	34378	+	BC009781|RNF13|11342|ring finger protein 13##BC009803|RNF13|11342|ring finger protein 13##AF037204|RNF13|11342|ring finger protein 13##AF070558|RNF13|11342|ring finger protein 13##BC017878|RNF13|11342|ring finger protein 13##AK313304|RNF13|11342|ring finger protein 13##NM_007282|RNF13|11342|ring finger protein 13##NM_183381|RNF13|11342|ring finger protein 13##AK090638|RNF13|11342|ring finger protein 13##AF228738|PFN2|5217|profilin 2##EU832616|PFN2|5217|profilin 2##EU832688|PFN2|5217|profilin 2##AK311782|PFN2|5217|profilin 2##L10678|PFN2|5217|profilin 2##BC002964|PFN2|5217|profilin 2##BC095444|PFN2|5217|profilin 2##AK307227|PFN2|5217|profilin 2##AK311780|PFN2|5217|profilin 2##BC018049|PFN2|5217|profilin 2##AK297915|PFN2|5217|profilin 2##NM_002628|PFN2|5217|profilin 2##NM_053024|PFN2|5217|profilin 2##BC043646|PFN2|5217|profilin 2##BC012363|LOC646903|646903|uncharacterized LOC646903	0.834902	CTCF.p2:-3:0.835
chr4	110624223	110624330	reg1014340.p2	8.567	+	TSC_hg19_v1_chr4_+_110481443 NM_017918 AK291098 BC002633 AK095936 AK311030	-142859	+	TSC_hg19_v1_chr4_+_110354993 BC040137 AK300278	-269101	+	BC117135 BC143268 BC143269 BC143276 TSC_hg19_v1_chr4_+_110354970 NM_001042734 NM_006323	-269328	+	AB590350 DQ894589 EU176306 U20537 TSC_hg19_v1_chr4_-_110624602 BC000305 BC004460 NM_001226 NM_032992 U20536	315	-	DQ892725 DQ896860 CU677869 TSC_hg19_v1_chr4_-_110651216 AF306567 AF332892 AY359024 BC017218 AK075389 AK313081 NM_030821	26846	-	AB590959 CU676662 J02770 TSC_hg19_v1_chr4_-_110723176 AK290625 BC005275 Y00318 BC020718 AK299232	98890	-	NM_017918|CCDC109B|55013|coiled-coil domain containing 109B##AK291098|CCDC109B|55013|coiled-coil domain containing 109B##BC002633|CCDC109B|55013|coiled-coil domain containing 109B##AK095936|CCDC109B|55013|coiled-coil domain containing 109B##AK311030|CCDC109B|55013|coiled-coil domain containing 109B##BC040137|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##AK300278|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC117135|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143268|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143269|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143276|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_001042734|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_006323|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##DQ892725|PLA2G12A|81579|phospholipase A2, group XIIA##DQ896860|PLA2G12A|81579|phospholipase A2, group XIIA##AF306567|PLA2G12A|81579|phospholipase A2, group XIIA##AF332892|PLA2G12A|81579|phospholipase A2, group XIIA##AY359024|PLA2G12A|81579|phospholipase A2, group XIIA##BC017218|PLA2G12A|81579|phospholipase A2, group XIIA##AK075389|PLA2G12A|81579|phospholipase A2, group XIIA##AK313081|PLA2G12A|81579|phospholipase A2, group XIIA##NM_030821|PLA2G12A|81579|phospholipase A2, group XIIA##J02770|CFI|3426|complement factor I##AK290625|CFI|3426|complement factor I##BC005275|CFI|3426|complement factor I##Y00318|CFI|3426|complement factor I##BC020718|CFI|3426|complement factor I##AK299232|CFI|3426|complement factor I	0.745676	CTCF.p2:6:0.657
chr4	169104993	169105133	reg1017813.p1	8.567	+	NM_007193 BC007320 AF196478 AJ238979 CU675613 EU176730	-91294	+	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	-949323	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	-949359	-	TSC_hg19_v1_chr4_-_169239951 AK001649 BC038115 AK307404 NM_017631	134842	-	TSC_hg19_v1_chr4_-_169401573 AK096369	296517	-	TSC_hg19_v1_chr4_-_169401630 CR933601 NM_001012967	296557	-	NM_007193|ANXA10|11199|annexin A10##BC007320|ANXA10|11199|annexin A10##AF196478|ANXA10|11199|annexin A10##AJ238979|ANXA10|11199|annexin A10##EU176730|ANXA10|11199|annexin A10##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK001649|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##BC038115|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##AK307404|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##NM_017631|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##AK096369|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like##CR933601|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like##NM_001012967|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like	0.968358	CTCF.p2:-10:0.968
chr7	149322694	149322831	reg1015199.p2	8.567	+	TSC_hg19_v1_chr7_-_149321856 BC047675	-908	-	AB590454 AK295771 TSC_hg19_v1_chr7_-_149321793 AK022762	-1020	-	TSC_hg19_v1_chr7_-_149194899 NM_001163474 NM_152557 AK128244	-127864	-	TSC_hg19_v1_chr7_+_149412043 BC142722 BC146667 AB058765 BC150330 BC152409 NM_032534	89325	+	BC052625 NM_207336 BC038972	147538	-	NM_198455	150368	+	BC047675|ZNF767|79970|zinc finger family member 767##AK295771|ZNF767|79970|zinc finger family member 767##AK022762|ZNF767|79970|zinc finger family member 767##NM_001163474|ZNF746|155061|zinc finger protein 746##NM_152557|ZNF746|155061|zinc finger protein 746##AK128244|ZNF746|155061|zinc finger protein 746##BC142722|KRBA1|84626|KRAB-A domain containing 1##BC146667|KRBA1|84626|KRAB-A domain containing 1##AB058765|KRBA1|84626|KRAB-A domain containing 1##BC150330|KRBA1|84626|KRAB-A domain containing 1##BC152409|KRBA1|84626|KRAB-A domain containing 1##NM_032534|KRBA1|84626|KRAB-A domain containing 1##BC052625|ZNF467|168544|zinc finger protein 467##NM_207336|ZNF467|168544|zinc finger protein 467##BC038972|ZNF467|168544|zinc finger protein 467##NM_198455|SSPO|23145|SCO-spondin homolog (Bos taurus)	0.011019	
chr8	16975494	16975611	reg1015310.p2	8.567	+	TSC_hg19_v1_chr8_+_16884746 NM_181723 BC045553 EU832320 EU832405 BC032868	-90781	+	AB030648 AB590732 BC096720 BC098128 BC098153 BC098339 BC127125 BC141979 BC141980 BC137446 BC137447 AB044277 NM_019851	-115946	-	TSC_hg19_v1_chr8_-_16050222 NM_002445 NM_138715 NM_138716	-925293	-	TSC_hg19_v1_chr8_+_17013493 BC050272	37959	+	TSC_hg19_v1_chr8_+_17013805 AB023584 NM_016353	38282	+	TSC_hg19_v1_chr8_+_17014018 BC039253	38493	+	NM_181723|EFHA2|286097|EF-hand domain family, member A2##BC045553|EFHA2|286097|EF-hand domain family, member A2##EU832320|EFHA2|286097|EF-hand domain family, member A2##EU832405|EFHA2|286097|EF-hand domain family, member A2##BC032868|EFHA2|286097|EF-hand domain family, member A2##AB030648|FGF20|26281|fibroblast growth factor 20##BC096720|FGF20|26281|fibroblast growth factor 20##BC098128|FGF20|26281|fibroblast growth factor 20##BC098153|FGF20|26281|fibroblast growth factor 20##BC098339|FGF20|26281|fibroblast growth factor 20##BC127125|FGF20|26281|fibroblast growth factor 20##BC141979|FGF20|26281|fibroblast growth factor 20##BC141980|FGF20|26281|fibroblast growth factor 20##BC137446|FGF20|26281|fibroblast growth factor 20##BC137447|FGF20|26281|fibroblast growth factor 20##AB044277|FGF20|26281|fibroblast growth factor 20##NM_019851|FGF20|26281|fibroblast growth factor 20##NM_002445|MSR1|4481|macrophage scavenger receptor 1##NM_138715|MSR1|4481|macrophage scavenger receptor 1##NM_138716|MSR1|4481|macrophage scavenger receptor 1##BC050272|ZDHHC2|51201|zinc finger, DHHC-type containing 2##AB023584|ZDHHC2|51201|zinc finger, DHHC-type containing 2##NM_016353|ZDHHC2|51201|zinc finger, DHHC-type containing 2##BC039253|ZDHHC2|51201|zinc finger, DHHC-type containing 2	0.995126	CTCF.p2:2:0.995
chr14	106995666	106995790	reg1014577.p1	8.565	+	GQ232968 DQ454715 DQ454740 DQ454804 FJ840179 GU552701 FJ840340 GQ232950 GQ232981 GU552754 DQ454538 DQ454540 DQ454585 DQ523858 GU552713 AY003858 DQ454386 DQ454541 DQ454621 DQ454676 GU552719 GU552720 GU552767 AY003800 EF566901 DQ454598 DQ454606 DQ454788 DQ455001 DQ454592 Z11947 FJ873823 FJ873826 FJ873839 FJ873846 FJ873864 FJ873876 FJ873933 FJ873992 HM116214 EF175393 AY003851 EF175424 EU350424 GU358679 JF810268 EU099085 EU099261 AY206990 AF103064 AM279530 HM996031 GQ903512 AF103334 AF062095 AF103183 AF103113 L07311 AF165109 AY062321 HM774774 JN110645 JN110658 JN110671 JN110688 JN110706 JN110718 FJ385349 HM774039 HM774378 HM774566 HM774910 HQ704000 HQ704008 HQ704009 AY062300 HM774238 HM775050 AF103319 AF194121 HM775049 DQ100804 EU146317 EU146347 EU146389 DQ100818 DQ100905 AJ006652 AF485463 AF485473 AY423189 AY423190 AY423196 AY423198 AY423199 AY423207 HM996483 AF103257 AY941883 DQ100909 AF006520 AJ249628 AY866746 DQ187712 DQ524024 GU570284 HM995016 HM995139 HM995190 HM995191 HM995236 HM995887 HM995889 HM995890 HM995891 HM995919 HM996054 HM996304 HM996511 AJ245323 AJ245324 DQ322799 DQ840839 DQ840841 DQ926120 DQ926247 DQ926326 AB374202 AF115123 AF174048 AJ245353 AJ245354 AJ245355 AJ278773 AY640567 AY866807 AY941926 AY944711 DQ100900 DQ100918 DQ926040 DQ926081 DQ926084 DQ926450 DQ926565 DQ926602 DQ926604 EU794403 Z18824 AB021525 AB063673 AB363090 AB363101 AB363126 AB363166 AF021949 AF021979 AF035023 AF052525 AF062215 AF062235 AF129457 AF174081 AF398962 AF408730 AF455546 AF455553 AF471175 AF471178 AF471201 AF471216 AF471265 AF471373 AF471475 AF471476 AF471477 AF471486 AF471490 AF471494 AF471528 AJ239363 AJ239370 AJ389190 AJ413993 AJ627249 AM040520 AM040566 AM259133 AM259134 AY466507 AY866733 AY866738 AY866759 AY866795 AY941854 AY941870 AY941906 AY941952 AY941974 AY941976 AY941980 AY962566 D83682 DQ065617 DQ205182 DQ212502 DQ212503 DQ535300 DQ535366 DQ535419 DQ535472 DQ926167 DQ926385 DQ926389 DQ926413 DQ926426 DQ926459 DQ926557 DQ926616 EF177950 EU549721 FJ492926 GQ903506 GU570336 GU570338 GU570341 HM152510 U00501 U77374 X59703 X87449 Z33898 Z96965 Z98722 AF283800 AJ519241 HM995874 AJ519332 L28051 AJ519250 AJ519294 AY392920 AY393056 L08082 AF062182 AF062206 AF062253 AF062285 AY190818 X81729 Z47218 TSC_hg19_v1_chr14_-_106994347 AK097076 AK097206 AK097859 AK126358 AK128664 AK130501 AK301358 BX640853 BX640854	-1554	-	BX640710 TSC_hg19_v1_chr14_-_106967543 AK097354 AK097357 L22586 AK092384 AK125238 AX747511 AK125703 AK092976 AX747834 AK097028 L06610	-28161	-	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	-28428	-	DQ187707 GU552700 GU552764 AY003783 EF175429 FJ694883 EU099078 EU099213 AM183990 EU099124 HM774924 HM774242 JN110729 JN110849 AF103239 FJ385422 FJ385433 HM773968 HM773995 HM774338 HM774389 HM774601 HM774867 HM996424 HQ704020 FJ385411 EU146318 JN110975 AF062300 AF062305 DQ524053 HM994912 HM994914 HM994916 HM994920 HM995673 HM995674 HM995675 HM995676 HM995783 HM995910 HM995945 HM996441 HM996522 AF062299 AF471505 DQ187607 DQ322806 DQ840692 DQ840693 DQ840702 DQ840814 AM279609 DQ926615 EF178081 X99992 AB063924 AB066892 AB066969 AB067011 AB067080 AB067263 AF394199 AF455925 AF459632 AF471500 AF471503 AF471504 AJ300805 AJ579185 AY055477 AY055483 AY640482 AY941852 D83692 DQ005278 DQ005282 DQ100801 DQ926649 GU570351 GU570352 GU570354 L12185 L12186 X64240 Y11898 Z96974 HM995768 AJ519245 AJ519224 AJ519230 AJ519233 AJ519246 AJ519249 AJ519251 AJ519253 AJ519255 HM995877 AJ519222 AJ519299 AY393054 AY393058 AY393158 AY393161 AY190818 Z36887 AY623427 X52894 BC090938 TSC_hg19_v1_chr14_-_107013458	17562	-	TSC_hg19_v1_chr14_-_107013478 AK093806 AK097303 AK125632 AK126320 AK129510 AX748317	17748	-	AF267786 AF460742 AF460743 DQ454547 DQ454549 DQ454453 DQ454546 DQ454587 DQ454772 DQ523855 DQ454644 GU552737 DQ454456 DQ454588 DQ454927 EU433863 DQ454420 DQ454430 DQ454879 DQ454417 DQ454704 DQ454916 DQ454924 DQ454969 GU552772 DQ454423 DQ455004 EU099273 GU552771 DQ454935 DQ523903 DQ454770 DQ454843 FJ840010 FJ840025 FJ840144 FJ840161 FJ840267 FJ840276 FJ840292 FJ840293 FJ840346 FJ840350 FJ840358 FJ840360 FJ840363 FJ873816 FJ873820 FJ873848 FJ873865 FJ873868 FJ873928 FJ873940 FJ873954 FJ873964 FJ873985 FJ874015 FJ874045 FJ874091 GQ232837 HM116178 HM116213 HM116223 AJ008166 EU433880 GQ232769 GQ232840 GQ232959 EF175426 FJ694889 EF441751 EF441753 AY998718 U44492 U44503 U44504 U44505 AF017462 AJ008170 AJ008172 AJ008178 AJ008203 AJ487495 AJ230634 AJ230635 AJ230636 AJ230637 AJ230638 AJ230640 AJ230641 AJ230642 AJ230643 AJ230644 AJ230646 AJ230649 AJ230652 AJ230655 AJ230656 AJ230657 M34028 AY577299 S73611 S73613 FJ385326 GQ232913 GQ232958 GU552732 GU552750 AM279543 AF085655 AF085656 EU099270 AM233802 AM233804 EU099059 EU099279 EU099288 GQ232907 AF209895 AF209899 AF211932 AF343357 AF343358 AF343374 AF343390 AF343395 AF343401 AF343405 AF343419 AF343420 U86784 AJ862553 AJ862555 AJ862556 AJ862558 AJ862559 AJ862560 AJ862561 AJ862562 AJ862563 AJ862564 AJ862566 AJ862569 AJ862573 AM233783 AM233785 AM233805 AM233806 AM233807 AM233841 AY062302 HM774009 HM996214 AF103038 EU099234 HM773977 HM774742 AY062301 HM773976 HM774100 HM774513 HM774833 HM775004 HQ704065 HQ704066 HQ704067 HQ704068 AF103039 HM774204 HM774915 JN110745 JN110851 JN111173 JN111174 JN111195 JN111203 JN111206 JN111213 L04327 L04331 FJ385346 FJ385432 HM774001 HM774101 HM774244 HM774256 HM774288 HM774294 HM774334 HM774417 HM774549 HM774581 HM774591 HM774745 HM774776 HM774778 HM774796 HM774808 HM774855 HM774958 HM774983 HQ704004 HQ704052 HM775063 Z46853 AF103177 DQ524149 EU146312 EU146344 EU146346 EU146382 AB067195 AF103056 AY393315 AY393569 AY393571 EU099233 AF306373 AJ580927 AY062322 AY376089 U70236 AY393249 AY393314 AY393316 AY393318 AY393319 AY393320 AY393321 AY393455 AY393456 AY393457 AY393458 AY393459 AY393463 AY393466 AY393471 AY393566 AY393567 AY393568 AY393570 AY393572 AY393573 EU099231 EU099232 M34022 U00574 AF110479 AY062303 DQ926264 DQ926266 DQ926273 AF129750 AM233827 AM233828 AM233830 AM233831 AM233832 AM233833 AM233836 AM233838 AY640515 AB066833 AY941987 DQ168569 HM996472 HQ378399 AF021959 AJ239373 AJ272398 AJ555263 AY685303 DQ100803 DQ490742 DQ523920 DQ523934 DQ523971 DQ524022 DQ524049 DQ524147 DQ524150 DQ524160 DQ926054 GU570396 GU570398 HM995095 HM995420 HM995456 HM995460 HM995529 HM995571 HM995573 HM995577 HM995607 HM995969 HM996171 HM996234 HM996245 HM996273 HM996421 HM996528 HM996547 HQ378338 U77555 X94019 X94043 Z46759 HM995213 AB063835 AB063897 AB063925 AB066826 AB066832 AB066935 AB067154 AB067157 AB067159 AB067175 AB067326 AB067330 AB067334 AB067392 AB245095 AF174110 AF394197 AM279622 AY640502 AY640546 AY941916 AY941923 AY941958 AY971039 AY971068 AY971072 AY971073 AY971085 AY971113 AY971118 AY971121 AY971122 DQ100861 DQ100955 DQ100988 DQ490743 DQ926034 DQ926082 DQ926086 DQ926177 DQ926233 DQ926269 DQ926292 DQ926295 DQ926339 DQ926351 DQ926360 DQ926597 DQ926609 DQ926637 DQ926643 DQ926654 EU794427 EU794430 EU794443 FJ385310 FJ385369 GU570400 GU570406 HQ378329 HQ378361 HQ378384 X61649 AB063926 AB066971 AB066985 AB067015 AB067070 AB067074 AB067100 AB067116 AB067125 AB067129 AB067241 AF062125 AF062157 AF078940 AF078941 AF099197 AF110480 AF110484 AF110486 AF110487 AF174068 AF442760 AJ002767 AJ002771 AJ002772 AJ002773 AJ002774 AJ002775 AJ006165 AJ249378 AJ249636 AJ276099 AJ399826 AJ414007 AJ491906 AJ491907 AJ491913 AJ491914 AJ555254 AY033242 AY033243 AY033250 AY033274 AY033275 AY033276 AY033281 AY033282 AY033286 AY033288 AY640520 AY781870 AY941877 AY941878 AY941879 AY941919 AY941920 AY941921 AY971098 DQ065619 DQ065621 DQ065625 DQ065655 DQ065657 DQ065658 DQ205181 DQ379476 DQ490737 DQ490744 DQ926149 DQ926201 DQ926390 DQ926391 DQ926462 DQ926465 DQ926503 DQ926525 DQ926533 DQ926560 HM152490 HQ378409 L12198 L26537 U22381 U44493 U77538 U77539 U77541 U77544 U77547 U77548 U77549 U77550 U77551 U77552 U77553 U77557 U77558 U77559 U77560 U77561 U77562 U77563 U77564 U77565 U77566 U77567 X87447 X94002 X94004 X94005 X94006 X94028 X94029 X94030 X94031 X94032 X94038 X94039 X94041 X94044 X94045 X94046 X94048 X94050 X94051 X94052 X94053 X94055 X94058 X94059 X94061 X94062 X94063 X94066 X94071 X94072 X94073 X94077 Z46760 Z97037 DQ535275 DQ535319 DQ535340 DQ535347 DQ535361 DQ535401 DQ535430 DQ535447 DQ535450 DQ535454 DQ535458 DQ926623 EF177983 EF177986 EF178042 EF178049 EF178067 EF178105 FJ195497 FJ195499 FJ195517 FJ195521 FJ195527 FJ195537 JN252502 Z26829 Z26830 Z26832 Z26833 Z26839 Z26842 Z26843 Z26844 HM995790 HM995656 HM995886 M27125 U77535 U77543 U77554 U77556 AY393198 AY393202 HM995637 HM995880 AY392957 AY392958 AY392962 AY392964 AY392965 AY392966 AY392968 AY392969 AY392970 AY392976 AY392978 AY392980 AY392984 AY393084 AY393086 AY393087 AY393088 AY393090 AY393092 AY393094 AY393096 AY393097 AY393185 AY393186 AY393187 AY393188 AY393189 AY393191 AY393192 AY393193 AY393194 AY393195 AY393196 AY393197 AY393199 AY393200 AY393201 AY393203 AY393204 AF085657 AF085658 AF085659 AM233808 AF052379 AF062154 AF062214 AF348829 AF348830 AF348831 AF348832 AF348833 AF348834 AJ131060 AM233779 AM233780 AM233803 AM233834 AM233839 AY190828 L03679 X65912 X65913 X65914 X65915 Z47219 Z47225 X58402 BC014258 X58401 X58400 X58397 BC089417 BC078670 TSC_hg19_v1_chr14_-_107035221	39263	-	AF035023|IGHV3-48|28424|immunoglobulin heavy variable 3-48##AK097076|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097859|IGHM|3507|immunoglobulin heavy constant mu##AK128664|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130501|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640854|IGH@|3492|immunoglobulin heavy locus##BX640710|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK097354|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097357|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK092384|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125238|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092976|IGHM|3507|immunoglobulin heavy constant mu##AK097028|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC014258|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089417|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC078670|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.69414	CTCF.p2:-25:0.694
chr8	427659	427764	reg1014695.p2	8.565	+	TSC_hg19_v1_chr8_+_356957 BC050393	-70727	+	AF419858 NM_012173 NM_183420 NM_183421 TSC_hg19_v1_chr8_+_356923	-70846	+	NM_173539 AK093442 AX748129 TSC_hg19_v1_chr8_+_182396 AK313454 NM_001042415 NM_001042416 BC026190	-245369	+	TSC_hg19_v1_chr8_-_494835 AY194292 FJ381685 BC136248 BC136249	67204	-	NM_175075	67619	-	TSC_hg19_v1_chr8_-_681182 EU832095 EU832187 AF161437	253469	-	BC050393|FBXO25|26260|F-box protein 25##AF419858|FBXO25|26260|F-box protein 25##NM_012173|FBXO25|26260|F-box protein 25##NM_183420|FBXO25|26260|F-box protein 25##NM_183421|FBXO25|26260|F-box protein 25##NM_173539|ZNF596|169270|zinc finger protein 596##AK313454|ZNF596|169270|zinc finger protein 596##NM_001042415|ZNF596|169270|zinc finger protein 596##NM_001042416|ZNF596|169270|zinc finger protein 596##BC026190|ZNF596|169270|zinc finger protein 596##AY194292|C8orf42|157695|chromosome 8 open reading frame 42##BC136248|C8orf42|157695|chromosome 8 open reading frame 42##BC136249|C8orf42|157695|chromosome 8 open reading frame 42##NM_175075|C8orf42|157695|chromosome 8 open reading frame 42##EU832095|ERICH1|157697|glutamate-rich 1##EU832187|ERICH1|157697|glutamate-rich 1##AF161437|ERICH1|157697|glutamate-rich 1	0.765017	CTCF.p2:0:0.752
chr11	119076601	119076723	reg1015965.p2	8.564	+	NM_001145018	-10079	-	NM_001168468 NM_024791 AK026409 AK091966 AK298333 AX747282 BX648391 TSC_hg19_v1_chr11_+_119056183 AK315403 BC029042 AY047359 CU688588 AB094096	-20476	+	TSC_hg19_v1_chr11_+_119039454 BX647705 AB094095 BC023974 NM_024618 NM_170722 AK303002 AK291716 BC110890	-37215	+	TSC_hg19_v1_chr11_-_119076895 BC043548	236	-	TSC_hg19_v1_chr11_+_119076992 X57110 NM_005188	321	+	TSC_hg19_v1_chr11_+_119077024 BC132733 BC136463	378	+	NM_001145018|CCDC153|283152|coiled-coil domain containing 153##NM_001168468|PDZD3|79849|PDZ domain containing 3##NM_024791|PDZD3|79849|PDZ domain containing 3##AK026409|PDZD3|79849|PDZ domain containing 3##AK091966|PDZD3|79849|PDZ domain containing 3##AK298333|PDZD3|79849|PDZ domain containing 3##BX648391|PDZD3|79849|PDZ domain containing 3##AK315403|PDZD3|79849|PDZ domain containing 3##BC029042|PDZD3|79849|PDZ domain containing 3##AY047359|PDZD3|79849|PDZ domain containing 3##AB094096|PDZD3|79849|PDZ domain containing 3##BX647705|NLRX1|79671|NLR family member X1##AB094095|NLRX1|79671|NLR family member X1##BC023974|NLRX1|79671|NLR family member X1##NM_024618|NLRX1|79671|NLR family member X1##NM_170722|NLRX1|79671|NLR family member X1##AK303002|NLRX1|79671|NLR family member X1##AK291716|NLRX1|79671|NLR family member X1##BC110890|NLRX1|79671|NLR family member X1##BC043548|CCDC153|283152|coiled-coil domain containing 153##X57110|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##NM_005188|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##BC132733|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##BC136463|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence	0.996841	CTCF.p2:7:0.997
chr6	97501854	97501954	reg1013212.p2	8.564	+	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	-129281	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-156140	-	TSC_hg19_v1_chr6_-_97345751 BC018802 AF161474	-156152	-	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	229186	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	1780676	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	1780768	+	NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC018802|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF161474|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2	0.898821	CTCF.p2:-6:0.899
chr14	59590818	59590966	reg1018996.p1	8.563	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-486146	+	AK302579 NM_001244193 AK310356 AK302718	-684466	+	NM_014749 BC066647	-696161	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	64512	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	341030	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	341164	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.905534	CTCF.p2:10:0.906
chr3	133943509	133943621	reg1014846.p2	8.563	+	BC051347 TSC_hg19_v1_chr3_-_133748836 NM_005630	-194692	-	U70867 BC041140 AK303550 AK309561 TSC_hg19_v1_chr3_-_133748770	-194815	-	AK025826 AK225383 BC051274 BC064502 BC082257 NM_025041	-294979	-	TSC_hg19_v1_chr3_-_133969397 AB527382	25899	-	TSC_hg19_v1_chr3_-_133969650 NM_001005861 NM_002958 X69970 X96588	26061	-	TSC_hg19_v1_chr3_-_134093290 AK223598 AK001343 AB023206 AK291616 NM_016201	149800	-	BC051347|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##NM_005630|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##U70867|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##BC041140|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK303550|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK309561|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK025826|C3orf36|80111|chromosome 3 open reading frame 36##AK225383|C3orf36|80111|chromosome 3 open reading frame 36##BC051274|C3orf36|80111|chromosome 3 open reading frame 36##BC064502|C3orf36|80111|chromosome 3 open reading frame 36##BC082257|C3orf36|80111|chromosome 3 open reading frame 36##NM_025041|C3orf36|80111|chromosome 3 open reading frame 36##NM_001005861|RYK|6259|RYK receptor-like tyrosine kinase##NM_002958|RYK|6259|RYK receptor-like tyrosine kinase##X69970|RYK|6259|RYK receptor-like tyrosine kinase##X96588|RYK|6259|RYK receptor-like tyrosine kinase##AK223598|AMOTL2|51421|angiomotin like 2##AK001343|AMOTL2|51421|angiomotin like 2##AB023206|AMOTL2|51421|angiomotin like 2##AK291616|AMOTL2|51421|angiomotin like 2##NM_016201|AMOTL2|51421|angiomotin like 2	0.694154	CTCF.p2:19:0.694
chr4	147263913	147264020	reg1015729.p1	8.563	+	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	-167099	+	BC033879 TSC_hg19_v1_chr4_-_146859976	-403998	-	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	-404289	-	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	179030	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	296125	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	603032	-	NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29	0.186193	
chr14	19641492	19641600	reg1016375.p1	8.562	+	AY462874 AY465171 AY465172 NM_001005356 BC127623	-88172	+	BC136730 BC136731 NM_001013354	-263989	+	None	None	None	AY462874 AY465172 NM_001145442	378725	-	NM_001197287	540944	-	AB463966 NM_172194	574040	+	AY462874|POTEG|404785|POTE ankyrin domain family, member G##AY465171|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##NM_001005356|POTEG|404785|POTE ankyrin domain family, member G##BC127623|POTEG|404785|POTE ankyrin domain family, member G##BC136730|OR11H12|440153|olfactory receptor, family 11, subfamily H, member 12##BC136731|OR11H12|440153|olfactory receptor, family 11, subfamily H, member 12##NM_001013354|OR11H12|440153|olfactory receptor, family 11, subfamily H, member 12##AY462874|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##NM_001145442|POTEM|641455|POTE ankyrin domain family, member M##NM_001197287|OR11H2|79334|olfactory receptor, family 11, subfamily H, member 2##NM_172194|OR4Q3|441669|olfactory receptor, family 4, subfamily Q, member 3	0.760895	CTCF.p2:7:0.761
chr15	75660231	75660345	reg1016520.p1	8.562	+	NM_024608 AK026055	-20919	+	NM_017828 AK225716 BC033744 AK000459 AK293708 AK057145 AK124968 AK314740 BC069195 BC068998 AL136872	-31894	+	AF263742 NM_001145224	-85110	+	AB209141 TSC_hg19_v1_chr15_-_75660874	573	-	TSC_hg19_v1_chr15_-_75660937 CU690718 AL136876 BC080191 AK295265 BC050550 BC038594 NM_006715	634	-	AK225145 TSC_hg19_v1_chr15_-_75660949 AK294892 AK301170 AK311065	669	-	NM_024608|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)##AK026055|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)##NM_017828|COMMD4|54939|COMM domain containing 4##AK225716|COMMD4|54939|COMM domain containing 4##BC033744|COMMD4|54939|COMM domain containing 4##AK000459|COMMD4|54939|COMM domain containing 4##AK293708|COMMD4|54939|COMM domain containing 4##AK057145|COMMD4|54939|COMM domain containing 4##AK314740|COMMD4|54939|COMM domain containing 4##BC069195|COMMD4|54939|COMM domain containing 4##BC068998|COMMD4|54939|COMM domain containing 4##AL136872|COMMD4|54939|COMM domain containing 4##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001145224|GOLGA6D|653643|golgin A6 family, member D##AB209141|MAN2C1|4123|mannosidase, alpha, class 2C, member 1##AL136876|MAN2C1|4123|mannosidase, alpha, class 2C, member 1##BC080191|MAN2C1|4123|mannosidase, alpha, class 2C, member 1##AK295265|MAN2C1|4123|mannosidase, alpha, class 2C, member 1##BC050550|MAN2C1|4123|mannosidase, alpha, class 2C, member 1##BC038594|MAN2C1|4123|mannosidase, alpha, class 2C, member 1##NM_006715|MAN2C1|4123|mannosidase, alpha, class 2C, member 1##AK225145|MAN2C1|4123|mannosidase, alpha, class 2C, member 1##AK294892|MAN2C1|4123|mannosidase, alpha, class 2C, member 1##AK301170|MAN2C1|4123|mannosidase, alpha, class 2C, member 1##AK311065|MAN2C1|4123|mannosidase, alpha, class 2C, member 1	1.508334	CTCF.p2:1:0.359	CTCF.p2:-17:0.631	CTCF.p2:38:0.519
chr12	56988037	56988141	reg1013693.p2	8.561	+	TSC_hg19_v1_chr12_+_56915603 NM_002898 BC072679 AK308885 AK293315 AK304540 D28483 AK299580 BC027863 CU693300	-72392	+	AK289471 BC025661 BC036929 AK000467 AF110330 AK303772 AF223944 AK294822 BC119767 BC119768 BC059370 BC048344 NM_013267	-106049	-	NM_207344 TSC_hg19_v1_chr12_+_56862350 AF451989 AK300594 AL832247 BC020844 AK291920 BX647957 AK074733 AF289571	-125737	+	AF000422 TSC_hg19_v1_chr12_-_57006969	18827	-	AK023830 TSC_hg19_v1_chr12_-_57009380	21287	-	AK023842 TSC_hg19_v1_chr12_-_57024088	35953	-	NM_002898|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC072679|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK308885|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK293315|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK304540|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##D28483|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK299580|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC027863|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK289471|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC025661|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC036929|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK000467|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF110330|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK303772|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF223944|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK294822|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119767|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119768|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC059370|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC048344|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_013267|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_207344|SPRYD4|283377|SPRY domain containing 4##AF451989|SPRYD4|283377|SPRY domain containing 4##AK300594|SPRYD4|283377|SPRY domain containing 4##AL832247|SPRYD4|283377|SPRY domain containing 4##BC020844|SPRYD4|283377|SPRY domain containing 4##AK291920|SPRYD4|283377|SPRY domain containing 4##BX647957|SPRYD4|283377|SPRY domain containing 4##AK074733|SPRYD4|283377|SPRY domain containing 4##AF289571|SPRYD4|283377|SPRY domain containing 4##AF000422|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023830|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023842|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A	0.03335	
chr17	4468986	4469095	reg1014963.p2	8.561	+	CU687648 BC063111 AK129501 AK300648 AK296645 TSC_hg19_v1_chr17_-_4463871 AK074646 NM_001122890 NM_153338	-5189	-	EU832503 BC050546 TSC_hg19_v1_chr17_-_4458680 AF147709 AK303150 AK301622 AK307948 NM_001105538 NM_014520	-10366	-	NM_001124758 BC041772 TSC_hg19_v1_chr17_+_4402177 AB441165	-66804	+	NM_198501 AK124452 BC105050 BC112177	18284	+	BC110859 NM_001114974	18793	+	AB590843 M23892 BC029032 NM_001140 AK290309 AK296792 AK296904 AK312557	75918	-	BC063111|GGT6|124975|gamma-glutamyltransferase 6##AK129501|GGT6|124975|gamma-glutamyltransferase 6##AK300648|GGT6|124975|gamma-glutamyltransferase 6##AK296645|GGT6|124975|gamma-glutamyltransferase 6##AK074646|GGT6|124975|gamma-glutamyltransferase 6##NM_001122890|GGT6|124975|gamma-glutamyltransferase 6##NM_153338|GGT6|124975|gamma-glutamyltransferase 6##EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a##BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a##AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a##AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a##AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a##AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_001124758|SPNS2|124976|spinster homolog 2 (Drosophila)##BC041772|SPNS2|124976|spinster homolog 2 (Drosophila)##AB441165|SPNS2|124976|spinster homolog 2 (Drosophila)##NM_198501|SMTNL2|342527|smoothelin-like 2##AK124452|SMTNL2|342527|smoothelin-like 2##BC105050|SMTNL2|342527|smoothelin-like 2##BC112177|SMTNL2|342527|smoothelin-like 2##BC110859|SMTNL2|342527|smoothelin-like 2##NM_001114974|SMTNL2|342527|smoothelin-like 2##M23892|ALOX15|246|arachidonate 15-lipoxygenase##BC029032|ALOX15|246|arachidonate 15-lipoxygenase##NM_001140|ALOX15|246|arachidonate 15-lipoxygenase##AK290309|ALOX15|246|arachidonate 15-lipoxygenase##AK296792|ALOX15|246|arachidonate 15-lipoxygenase##AK296904|ALOX15|246|arachidonate 15-lipoxygenase##AK312557|ALOX15|246|arachidonate 15-lipoxygenase	0.124176	
chr17	79504713	79504851	reg1015121.p1	8.561	+	NM_001077182 NM_012418 AF030165 BC126295 BC130330 HQ258429	-9296	+	TSC_hg19_v1_chr17_-_79479865 NM_001199954 NM_001614	-24917	-	BC001920 BC015779 BC053572 BC015005 BC009848 BC010999 BC007442 BC012050 BC018774 BC015695 BC000292 AK304637 TSC_hg19_v1_chr17_-_79479829 AK291937 AK301175 X04098	-24977	-	AL834374 TSC_hg19_v1_chr17_-_79514725	9912	-	TSC_hg19_v1_chr17_-_79519415 AK024644 BC008883 DQ989324 NM_025161	14617	-	DQ895356 TSC_hg19_v1_chr17_-_79604087 AB040932 AK000664	99241	-	NM_001077182|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##NM_012418|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##AF030165|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC126295|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC130330|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##HQ258429|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##NM_001199954|ACTG1|71|actin, gamma 1##NM_001614|ACTG1|71|actin, gamma 1##BC001920|ACTG1|71|actin, gamma 1##BC015779|ACTG1|71|actin, gamma 1##BC053572|ACTG1|71|actin, gamma 1##BC015005|ACTG1|71|actin, gamma 1##BC009848|ACTG1|71|actin, gamma 1##BC010999|ACTG1|71|actin, gamma 1##BC007442|ACTG1|71|actin, gamma 1##BC012050|ACTG1|71|actin, gamma 1##BC018774|ACTG1|71|actin, gamma 1##BC015695|ACTG1|71|actin, gamma 1##BC000292|ACTG1|71|actin, gamma 1##AK304637|ACTG1|71|actin, gamma 1##AK291937|ACTG1|71|actin, gamma 1##AK301175|ACTG1|71|actin, gamma 1##X04098|ACTG1|71|actin, gamma 1##AL834374|C17orf70|80233|chromosome 17 open reading frame 70##AK024644|C17orf70|80233|chromosome 17 open reading frame 70##BC008883|C17orf70|80233|chromosome 17 open reading frame 70##DQ989324|C17orf70|80233|chromosome 17 open reading frame 70##NM_025161|C17orf70|80233|chromosome 17 open reading frame 70##DQ895356|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AB040932|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AK000664|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)	1.372213	CTCF.p2:12:0.942	CTCF.p2:67:0.430
chr17	9432473	9432594	reg1014788.p2	8.561	+	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	-507566	+	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	-563552	-	AY725853 AF128881 NM_014308	-616717	-	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	46598	-	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	46673	-	NM_001080556 NM_145054 AK074435 AB065281 BC025392 AK094847 AK315679 CU692990	47444	+	NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8##NM_001080556|WDR16|146845|WD repeat domain 16##NM_145054|WDR16|146845|WD repeat domain 16##AK074435|WDR16|146845|WD repeat domain 16##AB065281|WDR16|146845|WD repeat domain 16##BC025392|WDR16|146845|WD repeat domain 16##AK094847|WDR16|146845|WD repeat domain 16##AK315679|WDR16|146845|WD repeat domain 16	0.59782	CTCF.p2:4:0.598
chr7	37893233	37893361	reg1016072.p1	8.561	+	BC036816 NM_016616	-5099	+	AB529245 AY288420 BC120951 BC120952 NM_181791	-113302	+	BC043356 TSC_hg19_v1_chr7_+_37723380	-169915	+	AF026692 BC047684 BC058911 AK313029 TSC_hg19_v1_chr7_-_37956420 AK303977 AK302357	63114	-	TSC_hg19_v1_chr7_-_37956526 BC032828 NM_003014	63223	-	AY027862 NM_001242946 NM_017549 TSC_hg19_v1_chr7_+_37960259 BC018299	66926	+	BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##AY288420|GPR141|353345|G protein-coupled receptor 141##BC120951|GPR141|353345|G protein-coupled receptor 141##BC120952|GPR141|353345|G protein-coupled receptor 141##NM_181791|GPR141|353345|G protein-coupled receptor 141##AF026692|SFRP4|6424|secreted frizzled-related protein 4##BC047684|SFRP4|6424|secreted frizzled-related protein 4##BC058911|SFRP4|6424|secreted frizzled-related protein 4##AK313029|SFRP4|6424|secreted frizzled-related protein 4##AK303977|SFRP4|6424|secreted frizzled-related protein 4##AK302357|SFRP4|6424|secreted frizzled-related protein 4##BC032828|SFRP4|6424|secreted frizzled-related protein 4##NM_003014|SFRP4|6424|secreted frizzled-related protein 4##AY027862|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_001242946|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_017549|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC018299|EPDR1|54749|ependymin related protein 1 (zebrafish)	0.917665	CTCF.p2:4:0.918
chr11	120530937	120531089	reg1016831.p2	8.560	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-148548	+	BC063117 NM_001198665 NM_015313	-323396	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	-323909	+	AB384776 NM_014619 S67803	14	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	363797	+	NM_005422	442361	+	AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha	0.979786	CTCF.p2:-11:0.980
chr15	76102440	76102549	reg1012927.p1	8.560	+	TSC_hg19_v1_chr15_-_76030959 AK091244	-71525	-	TSC_hg19_v1_chr15_+_76016306 BC039862 NM_175881	-86180	+	TSC_hg19_v1_chr15_-_76005190 NM_001897	-97299	-	NM_173469 TSC_hg19_v1_chr15_+_76135647 AK000617	33141	+	TSC_hg19_v1_chr15_+_76135787 BC017708 AL832429	33298	+	TSC_hg19_v1_chr15_+_76135995 CU676032 AK294199	33544	+	AK091244|DNM1P35|100128285|DNM1 pseudogene 35##BC039862|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_175881|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_001897|CSPG4|1464|chondroitin sulfate proteoglycan 4##NM_173469|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK000617|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##BC017708|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AL832429|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK294199|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2	0.35592	CTCF.p2:5:0.356
chr17	57394422	57394520	reg1016522.p1	8.560	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	-96573	+	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	-107074	+	AK225380 TSC_hg19_v1_chr17_+_57233106 AK001891 AK225377 FJ161961 BC008669	-161351	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	14547	+	AF461690 NM_001166301 NM_024612 TSC_hg19_v1_chr17_+_57642970 BC024187 AK299151 AK095681 AF260270 AK226048 AB384723 DQ890909 DQ894060	248516	+	TSC_hg19_v1_chr17_+_57697037 NM_004859	302574	+	NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK225380|PRR11|55771|proline rich 11##AK001891|PRR11|55771|proline rich 11##AK225377|PRR11|55771|proline rich 11##FJ161961|PRR11|55771|proline rich 11##BC008669|PRR11|55771|proline rich 11##NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)##AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_004859|CLTC|1213|clathrin, heavy chain (Hc)	0.049737	
chrX	111066440	111066549	reg1015543.p2	8.560	+	NM_001039210 NM_001099922 NM_001168385 NM_018466 TSC_hg19_v1_chrX_+_110924425 AK300394 AK302729 AK311608 AK312229 BC005336 AF220051 AK316306 AK316522 AK304712 AK302890	-142075	+	AF040254 AF040255 TSC_hg19_v1_chrX_-_110655421 BC027925 AK290455 AK299822 NM_178151 NM_001195553 NM_178152 NM_178153	-411073	-	AJ003112 NM_000555	-412121	-	NM_001195576 NM_001195578	52858	+	BC034811 NM_001195577	58630	+	AF054568 NM_012471	259509	-	NM_001039210|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_001099922|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_001168385|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_018466|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK300394|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK302729|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK311608|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK312229|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##BC005336|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AF220051|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK316306|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK316522|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK304712|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK302890|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AF040254|DCX|1641|doublecortin##AF040255|DCX|1641|doublecortin##BC027925|DCX|1641|doublecortin##AK290455|DCX|1641|doublecortin##AK299822|DCX|1641|doublecortin##NM_178151|DCX|1641|doublecortin##NM_001195553|DCX|1641|doublecortin##NM_178152|DCX|1641|doublecortin##NM_178153|DCX|1641|doublecortin##AJ003112|DCX|1641|doublecortin##NM_000555|DCX|1641|doublecortin##NM_001195576|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195578|LOC100329135|100329135|uncharacterized LOC100329135##BC034811|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195577|LOC100329135|100329135|uncharacterized LOC100329135##AF054568|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##NM_012471|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5	0.753486	CTCF.p2:-14:0.753
chr1	21985700	21985849	reg1017662.p1	8.559	+	BC054490 TSC_hg19_v1_chr1_-_21978334 NM_001145658	-7427	-	AB003930 TSC_hg19_v1_chr1_-_21949064	-36737	-	TSC_hg19_v1_chr1_+_21835918 AK295608 AK312667 AK298085 BC021289 BC066116 BC090861 AB011406 AH007388 X95994 AK293184 BC110909	-149842	+	AB007943 M64788 TSC_hg19_v1_chr1_-_21995851 NM_001145657 NM_002885	10059	-	CU679968 AB384973 AK315005 BC104896 BC143343 BC143349 BC143354 TSC_hg19_v1_chr1_-_22109586 AK074247 AF502942 BC011576	123751	-	TSC_hg19_v1_chr1_-_22109643 BC103724 BC067261	123860	-	BC054490|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145658|RAP1GAP|5909|RAP1 GTPase activating protein##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein##AK295608|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK312667|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK298085|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC021289|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC066116|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC090861|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB011406|ALPL|249|alkaline phosphatase, liver/bone/kidney##X95994|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK293184|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC110909|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB007943|RAP1GAP|5909|RAP1 GTPase activating protein##M64788|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145657|RAP1GAP|5909|RAP1 GTPase activating protein##NM_002885|RAP1GAP|5909|RAP1 GTPase activating protein##AK315005|USP48|84196|ubiquitin specific peptidase 48##BC104896|USP48|84196|ubiquitin specific peptidase 48##BC143343|USP48|84196|ubiquitin specific peptidase 48##BC143349|USP48|84196|ubiquitin specific peptidase 48##BC143354|USP48|84196|ubiquitin specific peptidase 48##AK074247|USP48|84196|ubiquitin specific peptidase 48##AF502942|USP48|84196|ubiquitin specific peptidase 48##BC011576|USP48|84196|ubiquitin specific peptidase 48##BC103724|USP48|84196|ubiquitin specific peptidase 48##BC067261|USP48|84196|ubiquitin specific peptidase 48	0.371698	CTCF.p2:-10:0.372
chr17	34959475	34959602	reg1017216.p1	8.559	+	AK292307 NM_024864 BC072411	-1487	+	TSC_hg19_v1_chr17_+_34948329 NM_024308 AK315735 AY358712 BC002731	-11250	+	TSC_hg19_v1_chr17_+_34901498 AK290687 AF126964	-58026	+	BC084573 TSC_hg19_v1_chr17_-_35293961	334402	-	BC020470 NM_005568	335233	+	AK057229 NM_012138 TSC_hg19_v1_chr17_+_35306253 AF083208 BC000591 AJ249940 AB385572 CU674286 DQ892097 DQ895290	346761	+	AK292307|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024864|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##BC072411|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024308|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK315735|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AY358712|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##BC002731|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK290687|GGNBP2|79893|gametogenetin binding protein 2##AF126964|GGNBP2|79893|gametogenetin binding protein 2##BC020470|LHX1|3975|LIM homeobox 1##NM_005568|LHX1|3975|LIM homeobox 1##AK057229|AATF|26574|apoptosis antagonizing transcription factor##NM_012138|AATF|26574|apoptosis antagonizing transcription factor##AF083208|AATF|26574|apoptosis antagonizing transcription factor##BC000591|AATF|26574|apoptosis antagonizing transcription factor##AJ249940|AATF|26574|apoptosis antagonizing transcription factor##DQ892097|AATF|26574|apoptosis antagonizing transcription factor##DQ895290|AATF|26574|apoptosis antagonizing transcription factor	0.787773	CTCF.p2:16:0.788
chr9	81744913	81745070	reg1015928.p1	8.559	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	-832933	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	-893961	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-1098807	-	TSC_hg19_v1_chr9_+_82186879 NM_007005	441895	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	442533	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	442694	+	AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.594866	CTCF.p2:-4:0.595
chr10	97625099	97625219	reg1015534.p2	8.558	+	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	-109619	+	AJ133133 AJ133134 NM_001098175	-153624	+	BC068449 DQ278872 NM_001143973 NM_015631	-171260	-	AK294399 NM_001130446	42562	+	NM_001001732 NM_001159747 AK302377 BC075861	134705	+	TSC_hg19_v1_chr10_+_97803318 BC043175 NM_001134375 NM_001134376 NM_019084 AK092360 AK297264 AX747499	178222	+	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##BC068449|TCTN3|26123|tectonic family member 3##DQ278872|TCTN3|26123|tectonic family member 3##NM_001143973|TCTN3|26123|tectonic family member 3##NM_015631|TCTN3|26123|tectonic family member 3##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B##NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC043175|CCNJ|54619|cyclin J##NM_001134375|CCNJ|54619|cyclin J##NM_001134376|CCNJ|54619|cyclin J##NM_019084|CCNJ|54619|cyclin J##AK092360|CCNJ|54619|cyclin J##AK297264|CCNJ|54619|cyclin J	0.854685	CTCF.p2:5:0.855
chr1	207494434	207494614	reg1015138.p1	8.558	+	TSC_hg19_v1_chr1_+_207277658 BC022312 NM_000715 AK303798 AK313164 M31452 AK303793	-216875	+	BC005378 NM_000716 NM_001017364 L11245 NM_001017367 AK315137	-231903	+	NM_001017365 NM_001017366	-232313	+	NM_000574 NM_001114752 TSC_hg19_v1_chr1_+_207494999 AF052110 AX772832	388	+	TSC_hg19_v1_chr1_+_207495024 AK312448 AK300621 AK298549 BC001288 M30142 M31516	511	+	TSC_hg19_v1_chr1_+_207495084 AB240569 AB240570	553	+	BC022312|C4BPA|722|complement component 4 binding protein, alpha##NM_000715|C4BPA|722|complement component 4 binding protein, alpha##AK303798|C4BPA|722|complement component 4 binding protein, alpha##AK313164|C4BPA|722|complement component 4 binding protein, alpha##M31452|C4BPA|722|complement component 4 binding protein, alpha##AK303793|C4BPA|722|complement component 4 binding protein, alpha##BC005378|C4BPB|725|complement component 4 binding protein, beta##NM_000716|C4BPB|725|complement component 4 binding protein, beta##NM_001017364|C4BPB|725|complement component 4 binding protein, beta##L11245|C4BPB|725|complement component 4 binding protein, beta##NM_001017367|C4BPB|725|complement component 4 binding protein, beta##AK315137|C4BPB|725|complement component 4 binding protein, beta##NM_001017365|C4BPB|725|complement component 4 binding protein, beta##NM_001017366|C4BPB|725|complement component 4 binding protein, beta##NM_000574|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_001114752|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AF052110|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK312448|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK300621|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK298549|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BC001288|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M30142|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M31516|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240569|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240570|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)	0.322644	CTCF.p2:7:0.323
chr10	53720285	53720404	reg1016960.p1	8.557	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-260997	-	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-886053	+	TSC_hg19_v1_chr10_+_52751129 D45864	-969223	+	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	353771	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	811082	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2840654	-	AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##D45864|PRKG1|5592|protein kinase, cGMP-dependent, type I##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15	0.973167	CTCF.p2:8:0.973
chr11	71575193	71575299	reg1015413.p1	8.557	+	AF529416 NM_001002035	-31001	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	-50340	-	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	-76639	+	NM_001242853	14252	+	NM_018320	64521	+	TSC_hg19_v1_chr11_+_71640092 AL833638 AK023139 AK094508 CR457298 BC009672 BC093084 BC117273	64865	+	AF529416|DEFB108B|245911|defensin, beta 108B##NM_001002035|DEFB108B|245911|defensin, beta 108B##BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene##NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1##NM_001242853|LOC100129216|100129216|beta-defensin 131-like##NM_018320|RNF121|55298|ring finger protein 121##AL833638|RNF121|55298|ring finger protein 121##AK023139|RNF121|55298|ring finger protein 121##AK094508|RNF121|55298|ring finger protein 121##CR457298|RNF121|55298|ring finger protein 121##BC009672|RNF121|55298|ring finger protein 121##BC093084|RNF121|55298|ring finger protein 121##BC117273|RNF121|55298|ring finger protein 121	0.0	
chr18	2542082	2542173	reg1013034.p2	8.557	+	NM_001117 BC093837 BC101803 S83513	-1636786	+	AK313050 NM_001099733	-1637184	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-1729824	-	AK290001 BC111020 NM_022840	29328	-	NM_006101 BC005239 TSC_hg19_v1_chr18_+_2571579 AK289396 AK313184 BC035617 BC010171	29418	+	TSC_hg19_v1_chr18_+_2571589 AF017790	29468	+	NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4##NM_006101|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC005239|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK289396|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK313184|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC035617|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC010171|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AF017790|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)	0.530215	CTCF.p2:8:0.530
chr21	25886543	25886659	reg1013132.p1	8.557	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-85533	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-3515828	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-3515911	+	TSC_hg19_v1_chr21_+_26934442 AF402776	1047871	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	1093214	-	NM_021219 TSC_hg19_v1_chr21_+_27011719	1125052	+	AK124194|FLJ42200|400860|FLJ42200 protein##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##NM_021219|JAM2|58494|junctional adhesion molecule 2	0.997296	CTCF.p2:24:0.997
chrX	118832934	118833045	reg1015939.p1	8.557	+	AY034177 AF403058 AF403059 AF403060 AF403061 AF403062 AY679521 NM_015129 NM_145799 NM_145800 NM_145802 TSC_hg19_v1_chrX_-_118827360 AK290977	-5638	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	-5810	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	-5857	-	TSC_hg19_v1_chrX_+_118892553 NM_001105576	59592	+	U57846 AK098280 BC001019 D79205 TSC_hg19_v1_chrX_-_118925592 BC070205 D28397 NM_001000	92595	-	TSC_hg19_v1_chrX_-_118986969 AF318576 AK093728 AX748280 BC121017 BC121018 AY013251 BC008494 NM_023010 NM_080632	153962	-	AY034177|SEPT6|23157|septin 6##AF403058|SEPT6|23157|septin 6##AF403059|SEPT6|23157|septin 6##AF403060|SEPT6|23157|septin 6##AF403061|SEPT6|23157|septin 6##AF403062|SEPT6|23157|septin 6##AY679521|SEPT6|23157|septin 6##NM_015129|SEPT6|23157|septin 6##NM_145799|SEPT6|23157|septin 6##NM_145800|SEPT6|23157|septin 6##NM_145802|SEPT6|23157|septin 6##AK290977|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##NM_001105576|ANKRD58|347454|ankyrin repeat domain 58##U57846|RPL39|6170|ribosomal protein L39##BC001019|RPL39|6170|ribosomal protein L39##D79205|RPL39|6170|ribosomal protein L39##BC070205|RPL39|6170|ribosomal protein L39##D28397|RPL39|6170|ribosomal protein L39##NM_001000|RPL39|6170|ribosomal protein L39##AF318576|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##AK093728|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC121017|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC121018|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##AY013251|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC008494|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##NM_023010|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##NM_080632|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)	0.116995	
chr1	235946581	235946708	reg1015941.p2	8.556	+	BC022485 NM_001098721 NM_004485	-132591	-	TSC_hg19_v1_chr1_-_235813301 AK311781 NM_001098722	-133462	-	BC029564 NM_152490 TSC_hg19_v1_chr1_-_235667782	-278863	-	TSC_hg19_v1_chr1_-_236030193 BC020793	83539	-	NM_000081 U67615 TSC_hg19_v1_chr1_-_236030233	83600	-	TSC_hg19_v1_chr1_-_236228375 AB209448 CU692272	281733	-	BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##AK311781|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098722|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##BC029564|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_152490|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_000081|LYST|1130|lysosomal trafficking regulator##U67615|LYST|1130|lysosomal trafficking regulator##AB209448|NID1|4811|nidogen 1	0.994852	CTCF.p2:26:0.995
chr17	47573862	47573989	reg1017173.p1	8.556	+	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	-1237	+	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	-81677	-	BC095460 TSC_hg19_v1_chr17_-_47492215	-81710	-	TSC_hg19_v1_chr17_+_47653192 AL834282 NM_007225	79311	+	TSC_hg19_v1_chr17_+_47653475 BC022541 AK308928 AY358526 AB385434	79602	+	TSC_hg19_v1_chr17_-_47755471 BC003385 AK222589 AK312691 AJ000644 AK303268 AK316366 BC001269 AK293587 AK300616 NM_001007226 NM_001007227 NM_001007228 NM_001007229 NM_001007230 NM_003563	181507	-	AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##BC095460|PHB|5245|prohibitin##AL834282|NXPH3|11248|neurexophilin 3##NM_007225|NXPH3|11248|neurexophilin 3##BC022541|NXPH3|11248|neurexophilin 3##AK308928|NXPH3|11248|neurexophilin 3##AY358526|NXPH3|11248|neurexophilin 3##BC003385|SPOP|8405|speckle-type POZ protein##AK222589|SPOP|8405|speckle-type POZ protein##AK312691|SPOP|8405|speckle-type POZ protein##AJ000644|SPOP|8405|speckle-type POZ protein##AK303268|SPOP|8405|speckle-type POZ protein##AK316366|SPOP|8405|speckle-type POZ protein##BC001269|SPOP|8405|speckle-type POZ protein##AK293587|SPOP|8405|speckle-type POZ protein##AK300616|SPOP|8405|speckle-type POZ protein##NM_001007226|SPOP|8405|speckle-type POZ protein##NM_001007227|SPOP|8405|speckle-type POZ protein##NM_001007228|SPOP|8405|speckle-type POZ protein##NM_001007229|SPOP|8405|speckle-type POZ protein##NM_001007230|SPOP|8405|speckle-type POZ protein##NM_003563|SPOP|8405|speckle-type POZ protein	0.31582	CTCF.p2:12:0.316
chr4	84203317	84203435	reg1014423.p2	8.556	+	TSC_hg19_v1_chr4_-_84035912 AK000140 NM_001130715 NM_016619	-167449	-	AF208846 EU570985 EU570986 TSC_hg19_v1_chr4_-_84035890 AJ422147	-167485	-	BC012205 NM_001130716	-172373	-	TSC_hg19_v1_chr4_-_84205924 DQ895928 EU176380 BC008804 AK023076	2539	-	TSC_hg19_v1_chr4_-_84205952 AK129583 AK300972 BC020728 AJ621061 NM_015697	2627	-	AJ627581 TSC_hg19_v1_chr4_-_84255962 AF084467 AM419200 AY948074 CU690802 AF152376 NM_001199830 AF165154 AK075400	52570	-	AK000140|PLAC8|51316|placenta-specific 8##NM_001130715|PLAC8|51316|placenta-specific 8##NM_016619|PLAC8|51316|placenta-specific 8##AF208846|PLAC8|51316|placenta-specific 8##EU570985|PLAC8|51316|placenta-specific 8##EU570986|PLAC8|51316|placenta-specific 8##AJ422147|PLAC8|51316|placenta-specific 8##BC012205|PLAC8|51316|placenta-specific 8##NM_001130716|PLAC8|51316|placenta-specific 8##DQ895928|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##EU176380|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC008804|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK023076|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK129583|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK300972|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC020728|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AJ621061|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##NM_015697|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AF084467|HPSE|10855|heparanase##AM419200|HPSE|10855|heparanase##AY948074|HPSE|10855|heparanase##AF152376|HPSE|10855|heparanase##NM_001199830|HPSE|10855|heparanase##AF165154|HPSE|10855|heparanase##AK075400|HPSE|10855|heparanase	0.974639	CTCF.p2:10:0.975
chr1	545013	545194	reg1007779.p2	8.555	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-177455	+	NM_001005484	-476013	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-515698	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	76939	-	TSC_hg19_v1_chr1_-_714015 BC006361	168914	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	217792	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	2.931006	CTCF.p2:4:0.977	CTCF.p2:-63:0.977	CTCF.p2:72:0.977
chr12	132320923	132321029	reg1014919.p1	8.554	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	-8010	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	-125320	+	TSC_hg19_v1_chr12_+_132195623 BC142980	-125363	+	TSC_hg19_v1_chr12_+_132379266 AF045458 NM_003565	58297	+	TSC_hg19_v1_chr12_+_132413775 NM_001002020 AK292242	92783	+	TSC_hg19_v1_chr12_+_132413820 NM_001002019 AK074659 NM_025215 BC035964 AF318369 BC002901	92829	+	BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AF045458|ULK1|8408|unc-51-like kinase 1 (C. elegans)##NM_003565|ULK1|8408|unc-51-like kinase 1 (C. elegans)##NM_001002020|PUS1|80324|pseudouridylate synthase 1##AK292242|PUS1|80324|pseudouridylate synthase 1##NM_001002019|PUS1|80324|pseudouridylate synthase 1##AK074659|PUS1|80324|pseudouridylate synthase 1##NM_025215|PUS1|80324|pseudouridylate synthase 1##BC035964|PUS1|80324|pseudouridylate synthase 1##AF318369|PUS1|80324|pseudouridylate synthase 1##BC002901|PUS1|80324|pseudouridylate synthase 1	0.935621	CTCF.p2:2:0.884
chr19	5322001	5322181	reg1015271.p1	8.554	+	TSC_hg19_v1_chr19_+_5032899 CU687848	-289192	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-352918	+	NM_015015 TSC_hg19_v1_chr19_+_4969124	-352967	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	18703	-	AK098722 NM_181710 AK292251 BC017592	133335	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	300667	-	AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##NM_015015|KDM4B|23030|lysine (K)-specific demethylase 4B##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2	0.0	
chr5	162506768	162506875	reg1014252.p1	8.553	+	NM_000816 NM_198903 NM_198904 BC052926 BC036030 X15376 BC059389 BC069348 BC074795 AK315200 AK299640	-1011976	+	NM_001127648 AB590312 DQ890915	-1229062	+	NM_001127647	-1229430	+	TSC_hg19_v1_chr5_+_162864606 AK316234 NM_004060 NM_199246 AK297190 AK312913 BC007093 BX538035 D78341 L49504 BC000196	357800	+	AB528197 AM392736 AM393438 FJ215684 AK094647 TSC_hg19_v1_chr5_-_162887097	380257	-	AK311957 TSC_hg19_v1_chr5_-_162887119 BC017934 BX538290 NM_145266	380312	-	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127647|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK316234|CCNG1|900|cyclin G1##NM_004060|CCNG1|900|cyclin G1##NM_199246|CCNG1|900|cyclin G1##AK297190|CCNG1|900|cyclin G1##AK312913|CCNG1|900|cyclin G1##BC007093|CCNG1|900|cyclin G1##BX538035|CCNG1|900|cyclin G1##D78341|CCNG1|900|cyclin G1##L49504|CCNG1|900|cyclin G1##BC000196|CCNG1|900|cyclin G1##AM392736|NUDCD2|134492|NudC domain containing 2##AM393438|NUDCD2|134492|NudC domain containing 2##FJ215684|NUDCD2|134492|NudC domain containing 2##AK311957|NUDCD2|134492|NudC domain containing 2##BC017934|NUDCD2|134492|NudC domain containing 2##BX538290|NUDCD2|134492|NudC domain containing 2##NM_145266|NUDCD2|134492|NudC domain containing 2	0.143152	
chr12	83398518	83398698	reg1016197.p2	8.552	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	-317347	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	-317691	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	-317908	+	AK291207 AK022853 TSC_hg19_v1_chr12_-_85306547	1907935	-	TSC_hg19_v1_chr12_-_85306575 BC022253 BC070040	1907964	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	1907984	-	AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK291207|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK022853|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC022253|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC070040|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15	0.244107	CTCF.p2:-20:0.244
chr1	53370678	53370778	reg1014813.p1	8.552	+	AY271826 NM_001004339	-62546	+	TSC_hg19_v1_chr1_-_53238345 D28429	-132385	-	TSC_hg19_v1_chr1_+_53192124 AK296460 NM_024646 AB051517	-178610	+	TSC_hg19_v1_chr1_-_53387217 AK300896 AK299834	16499	-	TSC_hg19_v1_chr1_-_53387399 CU692200 BC038389 BC044574 AK315906 AK310650 AK001810	16641	-	TSC_hg19_v1_chr1_-_53387413 BC051887 BC040480 NM_001198961 NM_001198962 NM_018281 AK309535	16765	-	AY271826|ZYG11A|440590|zyg-11 homolog A (C. elegans)##NM_001004339|ZYG11A|440590|zyg-11 homolog A (C. elegans)##AK296460|ZYG11B|79699|zyg-11 homolog B (C. elegans)##NM_024646|ZYG11B|79699|zyg-11 homolog B (C. elegans)##AB051517|ZYG11B|79699|zyg-11 homolog B (C. elegans)##AK300896|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK299834|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC038389|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC044574|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK315906|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK310650|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK001810|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC051887|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC040480|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_001198961|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_001198962|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_018281|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK309535|ECHDC2|55268|enoyl CoA hydratase domain containing 2	0.0	
chr11	122376591	122376694	reg1013509.p2	8.551	+	BC130361 BC130363 AF303179 NM_001001786	-389781	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-915544	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-1053467	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	149905	+	BC070266 AK313578 AF001622 NM_019604	332587	+	AK097534 BC068507 NM_024806 NM_199124	376789	+	BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63	0.454226	CTCF.p2:6:0.454
chr3	123361374	123361514	reg1017201.p1	8.551	+	TSC_hg19_v1_chr3_-_123339426 NM_053031 NM_053032	-21968	-	BC113458 BC113456 BC100761 BC100762 BC100763 AF096773 AF096774 AF096775 AK314412 TSC_hg19_v1_chr3_-_123339352 BC017811 BC107783 Y09530 BC064420 AK314443	-22160	-	TSC_hg19_v1_chr3_-_123303927 CU687458 AK289983 NM_198402 AK125375 BC060839 AY191814 BC049369	-57511	-	TSC_hg19_v1_chr3_-_123411207 AK300610	49773	-	TSC_hg19_v1_chr3_-_123603158 BC064695 NM_053025 NM_053026 NM_053027 NM_053028	241727	-	TSC_hg19_v1_chr3_-_123680077 AK123060 AK307847 AK294979 BC040285	318642	-	NM_053031|MYLK|4638|myosin light chain kinase##NM_053032|MYLK|4638|myosin light chain kinase##BC113458|MYLK|4638|myosin light chain kinase##BC113456|MYLK|4638|myosin light chain kinase##BC100761|MYLK|4638|myosin light chain kinase##BC100762|MYLK|4638|myosin light chain kinase##BC100763|MYLK|4638|myosin light chain kinase##AF096773|MYLK|4638|myosin light chain kinase##AF096774|MYLK|4638|myosin light chain kinase##AF096775|MYLK|4638|myosin light chain kinase##AK314412|MYLK|4638|myosin light chain kinase##BC017811|MYLK|4638|myosin light chain kinase##BC107783|MYLK|4638|myosin light chain kinase##Y09530|MYLK|4638|myosin light chain kinase##BC064420|MYLK|4638|myosin light chain kinase##AK314443|MYLK|4638|myosin light chain kinase##AK289983|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##NM_198402|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC060839|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AY191814|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC049369|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AK300610|MYLK|4638|myosin light chain kinase##BC064695|MYLK|4638|myosin light chain kinase##NM_053025|MYLK|4638|myosin light chain kinase##NM_053026|MYLK|4638|myosin light chain kinase##NM_053027|MYLK|4638|myosin light chain kinase##NM_053028|MYLK|4638|myosin light chain kinase##AK123060|CCDC14|64770|coiled-coil domain containing 14##AK307847|CCDC14|64770|coiled-coil domain containing 14##AK294979|CCDC14|64770|coiled-coil domain containing 14##BC040285|CCDC14|64770|coiled-coil domain containing 14	0.998409	CTCF.p2:3:0.998
chr9	126722802	126722930	reg1015340.p1	8.551	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-30555	-	NM_173689 AK123000 DQ426866 AY720432	-604373	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-691978	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	51017	+	TSC_hg19_v1_chr9_+_126774046 BC034458	51205	+	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	297144	+	BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC034458|LHX2|9355|LIM homeobox 2##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.594912	CTCF.p2:2:0.595
chrX	118142224	118142327	reg1015865.p1	8.551	+	TSC_hg19_v1_chrX_+_118109314 AK026265	-32937	+	TSC_hg19_v1_chrX_+_118108607 BC098283 BC099847 BC100671 BC103491 NM_001031855 NM_024778	-33622	+	TSC_hg19_v1_chrX_+_118108580 AK091777 AK290198 AX747177	-33695	+	NM_020721	142266	-	TSC_hg19_v1_chrX_+_118370247 NM_006667 AK313956 Y12711 BC034238 AK293618 DQ891774 DQ894958 CR456993	227990	+	NM_145305 TSC_hg19_v1_chrX_+_118533308 AK094254 BC071871	391012	+	AK026265|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC098283|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC099847|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC100671|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC103491|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_001031855|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_024778|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK091777|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK290198|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_020721|KIAA1210|57481|KIAA1210##NM_006667|PGRMC1|10857|progesterone receptor membrane component 1##AK313956|PGRMC1|10857|progesterone receptor membrane component 1##Y12711|PGRMC1|10857|progesterone receptor membrane component 1##BC034238|PGRMC1|10857|progesterone receptor membrane component 1##AK293618|PGRMC1|10857|progesterone receptor membrane component 1##DQ891774|PGRMC1|10857|progesterone receptor membrane component 1##DQ894958|PGRMC1|10857|progesterone receptor membrane component 1##CR456993|PGRMC1|10857|progesterone receptor membrane component 1##NM_145305|SLC25A43|203427|solute carrier family 25, member 43##AK094254|SLC25A43|203427|solute carrier family 25, member 43##BC071871|SLC25A43|203427|solute carrier family 25, member 43	0.583923	CTCF.p2:2:0.584
chr1	215699995	215700134	reg1017573.p1	8.550	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	-443454	+	NM_001017424	-521180	+	TSC_hg19_v1_chr1_+_214776585 U30872	-923446	+	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	40799	+	AF055580 AY481573 NM_007123 NM_206933	896673	-	HQ692853 AF117255 BC008218 AY388456 AK291647 TSC_hg19_v1_chr1_-_216896791 AB020639 AK290945 BC064700 NM_001243515 NM_001243518 NM_001243519 NM_001438	1196662	-	NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2##U30872|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3##AF055580|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##AY481573|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_007123|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_206933|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##HQ692853|ESRRG|2104|estrogen-related receptor gamma##AF117255|ESRRG|2104|estrogen-related receptor gamma##BC008218|ESRRG|2104|estrogen-related receptor gamma##AY388456|ESRRG|2104|estrogen-related receptor gamma##AK291647|ESRRG|2104|estrogen-related receptor gamma##AB020639|ESRRG|2104|estrogen-related receptor gamma##AK290945|ESRRG|2104|estrogen-related receptor gamma##BC064700|ESRRG|2104|estrogen-related receptor gamma##NM_001243515|ESRRG|2104|estrogen-related receptor gamma##NM_001243518|ESRRG|2104|estrogen-related receptor gamma##NM_001243519|ESRRG|2104|estrogen-related receptor gamma##NM_001438|ESRRG|2104|estrogen-related receptor gamma	0.997599	CTCF.p2:25:0.998
chr15	55582598	55582722	reg1000032.p2	8.550	+	TSC_hg19_v1_chr15_-_55582012 AK312836 NM_183235	-669	-	BC132800 BC136423 BC107680 NM_183236	-19562	-	AF125393 NM_183234 U57094 U38654 NM_004580	-20123	-	NM_004855 AK293666 AK314706 BC017711	28503	+	TSC_hg19_v1_chr15_-_55611322 AB593170	28680	-	D42138 TSC_hg19_v1_chr15_+_55611429 AK223330	28764	+	AK312836|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183235|RAB27A|5873|RAB27A, member RAS oncogene family##BC132800|RAB27A|5873|RAB27A, member RAS oncogene family##BC136423|RAB27A|5873|RAB27A, member RAS oncogene family##BC107680|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183236|RAB27A|5873|RAB27A, member RAS oncogene family##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004855|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK293666|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK314706|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##BC017711|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##D42138|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK223330|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B	0.0	
chr18	34152331	34152453	reg1011893.p2	8.550	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	-274678	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-384916	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-442504	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	256371	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	256502	-	AB073382 TSC_hg19_v1_chr18_-_34408948	256560	-	AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.870975	CTCF.p2:9:0.871
chr10	23447434	23447569	reg1014918.p2	8.549	+	BC117471 BC130380 NM_012228 BC018030 TSC_hg19_v1_chr10_+_23384507 AF151889 BC066305 AF122004 EU446941	-63018	+	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	-230520	+	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	-444011	-	AB463998 NM_178161	33957	+	BC035732 NM_153714	186270	-	AB188491 NM_001145373 TSC_hg19_v1_chr10_+_23728216	280709	+	BC117471|MSRB2|22921|methionine sulfoxide reductase B2##BC130380|MSRB2|22921|methionine sulfoxide reductase B2##NM_012228|MSRB2|22921|methionine sulfoxide reductase B2##BC018030|MSRB2|22921|methionine sulfoxide reductase B2##AF151889|MSRB2|22921|methionine sulfoxide reductase B2##BC066305|MSRB2|22921|methionine sulfoxide reductase B2##AF122004|MSRB2|22921|methionine sulfoxide reductase B2##EU446941|MSRB2|22921|methionine sulfoxide reductase B2##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67##AB188491|OTUD1|220213|OTU domain containing 1##NM_001145373|OTUD1|220213|OTU domain containing 1	0.975769	CTCF.p2:-6:0.976
chr4	116458670	116458835	reg1015946.p2	8.549	+	BC113075 BC012326 AK289670 AB036429 NM_022569	-423771	-	NM_003360 U30930	-915230	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-939169	+	AK074617 BC030831 NM_152402	1547981	-	TSC_hg19_v1_chr4_+_118954764 AY358852	2496019	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	2496823	+	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.997699	CTCF.p2:10:0.998
chr7	128249116	128249255	reg1016635.p1	8.549	+	NM_018396 TSC_hg19_v1_chr7_+_128116813 AK302775 BC107586 AK002212 BC064929 BC121115 BC121116 AK299960	-132348	+	TSC_hg19_v1_chr7_+_128095931 NM_001098786 NM_013332 AF144755 AK024729 AK222583 BC008573 BC001863 BC093742 BC112183	-153219	+	TSC_hg19_v1_chr7_-_128050037 AK092452 BC033622 AK054667 AK122994 NM_000883 NM_001102605 NM_001142576 NM_183243	-199148	-	BC066973 NM_001012454 NM_001128926 BC105729 BC105730 BC105731 BC047310	63161	+	TSC_hg19_v1_chr7_+_128349114 AK093161 AK302221 AX747964 BC040906 AK310426	99942	+	BC032842 AF367470 NM_032599 AK313608 AK310308 BC037248	106256	+	NM_018396|METTL2B|55798|methyltransferase like 2B##AK302775|METTL2B|55798|methyltransferase like 2B##BC107586|METTL2B|55798|methyltransferase like 2B##AK002212|METTL2B|55798|methyltransferase like 2B##BC064929|METTL2B|55798|methyltransferase like 2B##BC121115|METTL2B|55798|methyltransferase like 2B##BC121116|METTL2B|55798|methyltransferase like 2B##AK299960|METTL2B|55798|methyltransferase like 2B##NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated##AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK092452|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC033622|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054667|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK122994|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_000883|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001102605|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142576|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_183243|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC066973|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001012454|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001128926|FAM71F2|346653|family with sequence similarity 71, member F2##BC105729|FAM71F2|346653|family with sequence similarity 71, member F2##BC105730|FAM71F2|346653|family with sequence similarity 71, member F2##BC105731|FAM71F2|346653|family with sequence similarity 71, member F2##BC047310|FAM71F2|346653|family with sequence similarity 71, member F2##AK093161|FAM71F1|84691|family with sequence similarity 71, member F1##AK302221|FAM71F1|84691|family with sequence similarity 71, member F1##BC040906|FAM71F1|84691|family with sequence similarity 71, member F1##AK310426|FAM71F1|84691|family with sequence similarity 71, member F1##BC032842|FAM71F1|84691|family with sequence similarity 71, member F1##AF367470|FAM71F1|84691|family with sequence similarity 71, member F1##NM_032599|FAM71F1|84691|family with sequence similarity 71, member F1##AK313608|FAM71F1|84691|family with sequence similarity 71, member F1##AK310308|FAM71F1|84691|family with sequence similarity 71, member F1##BC037248|FAM71F1|84691|family with sequence similarity 71, member F1	0.97708	CTCF.p2:-10:0.977
chr9	21413869	21413949	reg1013056.p1	8.549	+	K01900 NM_002170 BC104828 BC104830 V00545 V00550	-4769	+	AY255838 V00548 AB590747 CR541921 JN848522 BC074936 BC074937 BC104163 BC104164 M54886 V00544 V00549 NM_000605	-28583	-	AB464595 CU686802 HQ258738 JN848523 BC093988 BC112002 BC069427 NM_006900	-45870	-	NM_024013 V00538 V00537 BC112300 BC112302 BC074928 BC074929 AB464595 CU686802 HQ258738 JN848523	26570	+	AY358570 NM_176891	68402	-	AK124391 TSC_hg19_v1_chr9_-_21559834	145873	-	K01900|IFNA8|3445|interferon, alpha 8##NM_002170|IFNA8|3445|interferon, alpha 8##BC104828|IFNA8|3445|interferon, alpha 8##BC104830|IFNA8|3445|interferon, alpha 8##V00545|IFNA8|3445|interferon, alpha 8##V00550|IFNA8|3445|interferon, alpha 8##AY255838|IFNA2|3440|interferon, alpha 2##V00548|IFNA2|3440|interferon, alpha 2##CR541921|IFNA2|3440|interferon, alpha 2##BC074936|IFNA2|3440|interferon, alpha 2##BC074937|IFNA2|3440|interferon, alpha 2##BC104163|IFNA2|3440|interferon, alpha 2##BC104164|IFNA2|3440|interferon, alpha 2##M54886|IFNA2|3440|interferon, alpha 2##V00544|IFNA2|3440|interferon, alpha 2##V00549|IFNA2|3440|interferon, alpha 2##NM_000605|IFNA2|3440|interferon, alpha 2##HQ258738|IFNA1|3439|interferon, alpha 1##BC093988|IFNA13|3447|interferon, alpha 13##BC112002|IFNA1|3439|interferon, alpha 1##BC069427|IFNA13|3447|interferon, alpha 13##NM_006900|IFNA13|3447|interferon, alpha 13##NM_024013|IFNA1|3439|interferon, alpha 1##V00538|IFNA1|3439|interferon, alpha 1##V00537|IFNA1|3439|interferon, alpha 1##BC112300|IFNA1|3439|interferon, alpha 1##BC112302|IFNA1|3439|interferon, alpha 1##BC074928|IFNA1|3439|interferon, alpha 1##BC074929|IFNA1|3439|interferon, alpha 1##HQ258738|IFNA1|3439|interferon, alpha 1##AY358570|IFNE|338376|interferon, epsilon##NM_176891|IFNE|338376|interferon, epsilon##AK124391|MIR31HG|554202|MIR31 host gene (non-protein coding)	0.0	
chr10	130658181	130658304	reg1017649.p1	8.548	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-733714	-	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	-812388	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-952787	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	607229	+	TSC_hg19_v1_chr10_+_131265507 BC000824	607272	+	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	1103811	-	NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3	0.992367	CTCF.p2:6:0.992
chr1	15177229	15177334	reg1014639.p2	8.548	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	-252087	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-1101340	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-1101358	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	73438	+	AY505121 NM_001018001	79014	+	AY505122 NM_001017999	95133	+	AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein	0.043066	
chr15	32903111	32903258	reg1015474.p2	8.548	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-580441	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-740241	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-740355	-	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	4578	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	30730	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	107073	+	AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1	0.994334	CTCF.p2:0:0.994
chr2	92210324	92210447	reg1015960.p1	8.548	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-362382	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-1998667	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-2132631	+	AK097438 BC021716 NM_144705 AK296678 CU692394	3326865	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	3481097	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	3577157	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.99859	CTCF.p2:23:0.999
chr5	42767728	42767848	reg1017285.p1	8.548	+	AK303469 NM_001134848 AK127368 BC015985 BC039102 TSC_hg19_v1_chr5_+_42756958	-10850	+	BC136496 NM_001242460 NM_001242461 NM_001242462	-201824	+	NM_001242406 Z11850	-202226	+	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	44203	-	TSC_hg19_v1_chr5_-_42993436 AK056817	225658	-	AB463523 BC067873 AY032883 NM_001014279	272508	-	AK303469|CCDC152|100129792|coiled-coil domain containing 152##NM_001134848|CCDC152|100129792|coiled-coil domain containing 152##AK127368|CCDC152|100129792|coiled-coil domain containing 152##BC015985|CCDC152|100129792|coiled-coil domain containing 152##BC039102|CCDC152|100129792|coiled-coil domain containing 152##BC136496|GHR|2690|growth hormone receptor##NM_001242460|GHR|2690|growth hormone receptor##NM_001242461|GHR|2690|growth hormone receptor##NM_001242462|GHR|2690|growth hormone receptor##NM_001242406|GHR|2690|growth hormone receptor##Z11850|GHR|2690|growth hormone receptor##Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK056817|FLJ32255|643977|uncharacterized LOC643977##BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39	0.332352	CTCF.p2:13:0.332
chr1	222340490	222340595	reg1014562.p1	8.547	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-425056	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-425112	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-425134	-	AY358602 BC007638 BC016552 NM_024746	380892	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	422635	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	450858	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.945004	CTCF.p2:7:0.945
chr6	26064893	26064999	reg1014700.p1	8.547	+	TSC_hg19_v1_chr6_-_26056699 AB451259 AB451385 EU446960 EU832089 EU832181 AB590706 CU678090 BC002649 AK290947 D28457 NM_005319	-8270	-	BC058834 TSC_hg19_v1_chr6_+_26045611 BC127610 NM_003531	-19318	+	BC096728 EU446966 NM_021062	-21062	-	U60319 AJ249335 AJ249336 AJ249337 AJ249338 AJ250635 NM_000410 NM_139003 NM_139004 NM_139006 NM_139007 NM_139008 NM_139009 NM_139010 NM_139011 AF144242 AF144243 AF144244 AF144245 BC074721 AF149804 AF150664 TSC_hg19_v1_chr6_+_26087639 AF079407 AF079408 AF079409 BC117201 BC117203 BC143887 AK293393 AK316502 AF115265 AF115264 AK300933 HQ258197 JN375754	22631	+	BC130558 BC130560 TSC_hg19_v1_chr6_+_26104160 AB590707 EU446977 HQ258693 NM_003542	39193	+	EU446962 HQ258096 BC130350 BC069517 CU686878 NM_005323 TSC_hg19_v1_chr6_-_26108364	43396	-	AB451259|HIST1H1C|3006|histone cluster 1, H1c##AB451385|HIST1H1C|3006|histone cluster 1, H1c##EU446960|HIST1H1C|3006|histone cluster 1, H1c##EU832089|HIST1H1C|3006|histone cluster 1, H1c##EU832181|HIST1H1C|3006|histone cluster 1, H1c##BC002649|HIST1H1C|3006|histone cluster 1, H1c##AK290947|HIST1H1C|3006|histone cluster 1, H1c##NM_005319|HIST1H1C|3006|histone cluster 1, H1c##BC058834|HIST1H3C|8352|histone cluster 1, H3c##BC127610|HIST1H3C|8352|histone cluster 1, H3c##NM_003531|HIST1H3C|8352|histone cluster 1, H3c##BC096728|HIST1H2BB|3018|histone cluster 1, H2bb##EU446966|HIST1H2BB|3018|histone cluster 1, H2bb##NM_021062|HIST1H2BB|3018|histone cluster 1, H2bb##U60319|HFE|3077|hemochromatosis##AJ249335|HFE|3077|hemochromatosis##AJ249336|HFE|3077|hemochromatosis##AJ249337|HFE|3077|hemochromatosis##AJ249338|HFE|3077|hemochromatosis##AJ250635|HFE|3077|hemochromatosis##NM_000410|HFE|3077|hemochromatosis##NM_139003|HFE|3077|hemochromatosis##NM_139004|HFE|3077|hemochromatosis##NM_139006|HFE|3077|hemochromatosis##NM_139007|HFE|3077|hemochromatosis##NM_139008|HFE|3077|hemochromatosis##NM_139009|HFE|3077|hemochromatosis##NM_139010|HFE|3077|hemochromatosis##NM_139011|HFE|3077|hemochromatosis##AF144242|HFE|3077|hemochromatosis##AF144243|HFE|3077|hemochromatosis##AF144244|HFE|3077|hemochromatosis##AF144245|HFE|3077|hemochromatosis##BC074721|HFE|3077|hemochromatosis##AF149804|HFE|3077|hemochromatosis##AF150664|HFE|3077|hemochromatosis##AF079407|HFE|3077|hemochromatosis##AF079408|HFE|3077|hemochromatosis##AF079409|HFE|3077|hemochromatosis##BC117201|HFE|3077|hemochromatosis##BC117203|HFE|3077|hemochromatosis##BC143887|HFE|3077|hemochromatosis##AK293393|HFE|3077|hemochromatosis##AK316502|HFE|3077|hemochromatosis##AF115265|HFE|3077|hemochromatosis##AF115264|HFE|3077|hemochromatosis##AK300933|HFE|3077|hemochromatosis##HQ258197|HFE|3077|hemochromatosis##JN375754|HFE|3077|hemochromatosis##BC130558|HIST1H4C|8364|histone cluster 1, H4c##BC130560|HIST1H4C|8364|histone cluster 1, H4c##EU446977|HIST1H4C|8364|histone cluster 1, H4c##HQ258693|HIST2H4B|554313|histone cluster 2, H4b##NM_003542|HIST1H4C|8364|histone cluster 1, H4c##EU446962|HIST1H1T|3010|histone cluster 1, H1t##HQ258096|HIST1H1T|3010|histone cluster 1, H1t##BC130350|HIST1H1T|3010|histone cluster 1, H1t##BC069517|HIST1H1T|3010|histone cluster 1, H1t##NM_005323|HIST1H1T|3010|histone cluster 1, H1t	0.875294	CTCF.p2:-1:0.875
chr6	27787591	27787730	reg1017597.p1	8.547	+	TSC_hg19_v1_chr6_+_27782799 BC066244 BC067485 BC067486 BC067487 BC067488 BC067489 NM_003521	-4853	+	BC066232 BC066233 BC066234 BC066235 BC066236 BC066237 NM_021066 TSC_hg19_v1_chr6_-_27782556 BC133048 BC133050	-5099	-	BC007518 TSC_hg19_v1_chr6_+_27777828 AK311991 NM_003536 EU446975 BC096128 BC096129 BC096130 BC143046 BC148243 BC148250	-9878	+	AK312028 BC017361 BC062345 AF086564 AB463742 BC148271 DQ892605 DQ895845 EU446976 BC120940 NM_021968	4225	+	BC111093 BC111434 BC128033 NM_003541 BC148271 DQ892605 DQ895845 EU446976 AB463742 AK312028	11660	-	BC104198 BC104199 NM_003510 AK311941 BC034487	18474	-	BC066244|HIST1H2BM|8342|histone cluster 1, H2bm##BC067485|HIST1H2BM|8342|histone cluster 1, H2bm##BC067486|HIST1H2BM|8342|histone cluster 1, H2bm##BC067487|HIST1H2BM|8342|histone cluster 1, H2bm##BC067488|HIST1H2BM|8342|histone cluster 1, H2bm##BC067489|HIST1H2BM|8342|histone cluster 1, H2bm##NM_003521|HIST1H2BM|8342|histone cluster 1, H2bm##BC066232|HIST1H2AJ|8331|histone cluster 1, H2aj##BC066233|HIST1H2AJ|8331|histone cluster 1, H2aj##BC066234|HIST1H2AJ|8331|histone cluster 1, H2aj##BC066235|HIST1H2AJ|8331|histone cluster 1, H2aj##BC066236|HIST1H2AJ|8331|histone cluster 1, H2aj##BC066237|HIST1H2AJ|8331|histone cluster 1, H2aj##NM_021066|HIST1H2AJ|8331|histone cluster 1, H2aj##BC133048|HIST1H2AJ|8331|histone cluster 1, H2aj##BC133050|HIST1H2AJ|8331|histone cluster 1, H2aj##BC007518|HIST1H3H|8357|histone cluster 1, H3h##AK311991|HIST1H3H|8357|histone cluster 1, H3h##NM_003536|HIST1H3H|8357|histone cluster 1, H3h##EU446975|HIST1H3H|8357|histone cluster 1, H3h##BC096128|HIST1H3H|8357|histone cluster 1, H3h##BC096129|HIST1H3H|8357|histone cluster 1, H3h##BC096130|HIST1H3H|8357|histone cluster 1, H3h##BC143046|HIST1H3H|8357|histone cluster 1, H3h##BC148243|HIST1H3H|8357|histone cluster 1, H3h##BC148250|HIST1H3H|8357|histone cluster 1, H3h##AK312028|HIST1H4K|8362|histone cluster 1, H4k##BC017361|HIST1H4J|8363|histone cluster 1, H4j##BC148271|HIST1H4J|8363|histone cluster 1, H4j##DQ892605|HIST1H4F|8361|histone cluster 1, H4f##DQ895845|HIST1H4F|8361|histone cluster 1, H4f##EU446976|HIST1H4A|8359|histone cluster 1, H4a##NM_021968|HIST1H4J|8363|histone cluster 1, H4j##NM_003541|HIST1H4K|8362|histone cluster 1, H4k##BC148271|HIST1H4J|8363|histone cluster 1, H4j##DQ892605|HIST1H4F|8361|histone cluster 1, H4f##DQ895845|HIST1H4F|8361|histone cluster 1, H4f##EU446976|HIST1H4A|8359|histone cluster 1, H4a##AK312028|HIST1H4K|8362|histone cluster 1, H4k##BC104198|HIST1H2AK|8330|histone cluster 1, H2ak##BC104199|HIST1H2AK|8330|histone cluster 1, H2ak##NM_003510|HIST1H2AK|8330|histone cluster 1, H2ak##AK311941|HIST1H2AK|8330|histone cluster 1, H2ak##BC034487|HIST1H2AK|8330|histone cluster 1, H2ak	0.947965	CTCF.p2:9:0.948
chr7	89927612	89927710	reg1011963.p1	8.547	+	NM_001039706 NM_001160138 AK093991 AK303034 AX748399 BC036351 AK302636 BC141834 BC142655 BC140742 AY349356	-53049	+	AF526382 AY358267 NM_001040666	-84528	+	AF455138 NM_001244944 NM_001244945 NM_152999 AK092666 AX747660 TSC_hg19_v1_chr7_+_89841171 AY008443 AY008444 AY008445 NM_001040665 NM_001244946 AK315043	-86546	+	TSC_hg19_v1_chr7_+_89976015 AF351613 NM_001042717 NM_033107 AK095561 BC107714 CR933597 AK294325 BC144162	48343	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	105043	+	TSC_hg19_v1_chr7_+_90032774 AL136770 BC016061	105143	+	NM_001039706|C7orf63|79846|chromosome 7 open reading frame 63##NM_001160138|C7orf63|79846|chromosome 7 open reading frame 63##AK093991|C7orf63|79846|chromosome 7 open reading frame 63##AK303034|C7orf63|79846|chromosome 7 open reading frame 63##BC036351|C7orf63|79846|chromosome 7 open reading frame 63##AK302636|C7orf63|79846|chromosome 7 open reading frame 63##BC141834|C7orf63|79846|chromosome 7 open reading frame 63##BC142655|C7orf63|79846|chromosome 7 open reading frame 63##BC140742|C7orf63|79846|chromosome 7 open reading frame 63##AY349356|C7orf63|79846|chromosome 7 open reading frame 63##AF526382|STEAP2|261729|STEAP family member 2, metalloreductase##AY358267|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040666|STEAP2|261729|STEAP family member 2, metalloreductase##AF455138|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244944|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244945|STEAP2|261729|STEAP family member 2, metalloreductase##NM_152999|STEAP2|261729|STEAP family member 2, metalloreductase##AK092666|STEAP2|261729|STEAP family member 2, metalloreductase##AY008443|STEAP2|261729|STEAP family member 2, metalloreductase##AY008444|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040665|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244946|STEAP2|261729|STEAP family member 2, metalloreductase##AK315043|STEAP2|261729|STEAP family member 2, metalloreductase##AF351613|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001042717|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_033107|GTPBP10|85865|GTP-binding protein 10 (putative)##AK095561|GTPBP10|85865|GTP-binding protein 10 (putative)##BC107714|GTPBP10|85865|GTP-binding protein 10 (putative)##CR933597|GTPBP10|85865|GTP-binding protein 10 (putative)##AK294325|GTPBP10|85865|GTP-binding protein 10 (putative)##BC144162|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12##AL136770|CLDN12|9069|claudin 12	0.221332	CTCF.p2:9:0.221
chr8	107534155	107534280	reg1017197.p1	8.547	+	AK296561 NM_001198532	-74066	+	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	-251794	+	AF119334 BC109222 BC109223 NM_012082	-1203071	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	135771	+	TSC_hg19_v1_chr8_+_107670114 AK292899 BC032710 BC019691	135898	+	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	204138	+	AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1##AK292899|OXR1|55074|oxidation resistance 1##BC032710|OXR1|55074|oxidation resistance 1##BC019691|OXR1|55074|oxidation resistance 1##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1	0.84489	CTCF.p2:8:0.845
chr10	99294669	99294798	reg1015367.p1	8.546	+	TSC_hg19_v1_chr10_+_99258879 CU675619	-35815	+	TSC_hg19_v1_chr10_+_99258694 BC007331 NM_024954 AK222597 AK021869	-36013	+	NM_022362 AF319947	-36295	-	AJ583444 AK056990 NM_001129981 NM_020349 BC107759	37514	+	AK094791 TSC_hg19_v1_chr10_+_99344126 BC011916 NM_001134670 NM_138413 BC045550 BC057821 AK293733	49372	+	TSC_hg19_v1_chr10_+_99344421 AK289440 CU691258 CU692268 EU831607 EU831618 EU831694 EU831704	49707	+	BC007331|UBTD1|80019|ubiquitin domain containing 1##NM_024954|UBTD1|80019|ubiquitin domain containing 1##AK222597|UBTD1|80019|ubiquitin domain containing 1##AK021869|UBTD1|80019|ubiquitin domain containing 1##NM_022362|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AF319947|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AJ583444|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##AK056990|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##NM_001129981|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##NM_020349|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##BC107759|ANKRD2|26287|ankyrin repeat domain 2 (stretch responsive muscle)##AK094791|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC011916|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##NM_001134670|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##NM_138413|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC045550|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC057821|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##AK289440|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831607|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831618|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831694|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831704|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1	1.897334	CTCF.p2:-10:0.997	CTCF.p2:17:0.900
chr15	39145959	39146052	reg1014794.p1	8.546	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-157207	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-289074	-	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-399660	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	396920	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	727324	+	AK093308 AX748045 BC045191 NM_152597	929023	-	AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.455352	CTCF.p2:6:0.455
chr5	137400948	137401066	reg1016351.p1	8.546	+	TSC_hg19_v1_chr5_-_137368794 NM_001101800 NM_001101801 NM_016603	-32217	-	TSC_hg19_v1_chr5_-_137368776 AK314224	-32231	-	TSC_hg19_v1_chr5_-_137368770 BC041335 BC048965	-32236	-	BC144497 AY009402 BC144001 AB057725 NM_058244 AB590697	18672	+	U90450 AK312181 AF067724 BC026182 NM_003551	74096	-	BC008039 BC008076 AB384833 AB209079 TSC_hg19_v1_chr5_-_137514319 AK310380 AK289951 AK293621 AK297756 AK299694 AK312333 AK225928 AL136823 NM_001164326 NM_006696 NM_139199	113326	-	NM_001101800|FAM13B|51306|family with sequence similarity 13, member B##NM_001101801|FAM13B|51306|family with sequence similarity 13, member B##NM_016603|FAM13B|51306|family with sequence similarity 13, member B##AK314224|FAM13B|51306|family with sequence similarity 13, member B##BC041335|FAM13B|51306|family with sequence similarity 13, member B##BC048965|FAM13B|51306|family with sequence similarity 13, member B##BC144497|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AY009402|WNT8A|7478|wingless-type MMTV integration site family, member 8A##BC144001|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AB057725|WNT8A|7478|wingless-type MMTV integration site family, member 8A##NM_058244|WNT8A|7478|wingless-type MMTV integration site family, member 8A##U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC008039|BRD8|10902|bromodomain containing 8##BC008076|BRD8|10902|bromodomain containing 8##AB209079|BRD8|10902|bromodomain containing 8##AK310380|BRD8|10902|bromodomain containing 8##AK289951|BRD8|10902|bromodomain containing 8##AK293621|BRD8|10902|bromodomain containing 8##AK297756|BRD8|10902|bromodomain containing 8##AK312333|BRD8|10902|bromodomain containing 8##AK225928|BRD8|10902|bromodomain containing 8##AL136823|BRD8|10902|bromodomain containing 8##NM_001164326|BRD8|10902|bromodomain containing 8##NM_006696|BRD8|10902|bromodomain containing 8##NM_139199|BRD8|10902|bromodomain containing 8	0.0	
chr11	6014001	6014123	reg1016844.p1	8.545	+	BC137343 NM_001005173	-5848	-	NM_001146033	-24339	-	NM_001003443	-45486	+	NM_001005179 BC136986	10338	-	BC136904 BC136911 NM_001001917	34908	-	BC136879 BC136880 NM_001005181	114898	+	BC137343|OR52L1|338751|olfactory receptor, family 52, subfamily L, member 1##NM_001005173|OR52L1|338751|olfactory receptor, family 52, subfamily L, member 1##NM_001146033|OR56A5|390084|olfactory receptor, family 56, subfamily A, member 5##NM_001003443|OR56A3|390083|olfactory receptor, family 56, subfamily A, member 3##NM_001005179|OR56A4|120793|olfactory receptor, family 56, subfamily A, member 4##BC136986|OR56A4|120793|olfactory receptor, family 56, subfamily A, member 4##BC136904|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1##BC136911|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1##NM_001001917|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1##BC136879|OR56B4|196335|olfactory receptor, family 56, subfamily B, member 4##BC136880|OR56B4|196335|olfactory receptor, family 56, subfamily B, member 4##NM_001005181|OR56B4|196335|olfactory receptor, family 56, subfamily B, member 4	0.933601	CTCF.p2:-10:0.934
chr5	115911911	115911977	reg1012556.p2	8.545	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-1430	-	TSC_hg19_v1_chr5_+_115898220 D28352	-13720	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-491223	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2412294	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2494867	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2495221	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.659154	CTCF.p2:-2:0.568
chr5	134073993	134074102	reg1015707.p1	8.545	+	TSC_hg19_v1_chr5_+_133984493 AK304060 NM_001252231 NM_021982 BC019341	-89616	+	BC002847 TSC_hg19_v1_chr5_-_133968519 AK223452 AF092130 BC093034 NM_001033503 NM_016103	-105550	-	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	-212242	+	TSC_hg19_v1_chr5_+_134074237 NM_001745 BC130325 AK313156 BC063532 U18242 AB590695 HQ258172 AF068179	263	+	NM_014829 TSC_hg19_v1_chr5_+_134094470 AK126011 AK291788 BC105598 AF106680 AB018344 BC012304 CU680282	20496	+	BC053677 NM_152409	107322	+	AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001252231|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC002847|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK223452|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AF092130|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##BC093034|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_001033503|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_016103|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15##NM_001745|CAMLG|819|calcium modulating ligand##BC130325|CAMLG|819|calcium modulating ligand##AK313156|CAMLG|819|calcium modulating ligand##BC063532|CAMLG|819|calcium modulating ligand##U18242|CAMLG|819|calcium modulating ligand##HQ258172|CAMLG|819|calcium modulating ligand##AF068179|CAMLG|819|calcium modulating ligand##NM_014829|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AK126011|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AK291788|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##BC105598|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AF106680|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AB018344|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##BC012304|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##BC053677|C5orf24|134553|chromosome 5 open reading frame 24##NM_152409|C5orf24|134553|chromosome 5 open reading frame 24	0.840308	CTCF.p2:-4:0.615	CTCF.p2:65:0.225
chr9	23123172	23123290	reg1017383.p1	8.545	+	AJ290954 TSC_hg19_v1_chr9_+_22447458 AK130018	-675782	+	AB464510 TSC_hg19_v1_chr9_+_22447162	-676118	+	TSC_hg19_v1_chr9_+_22446846 AK096011 NM_022160 BC130435 BC130437	-676394	+	BC030692 NM_001171197	698246	-	TSC_hg19_v1_chr9_-_23821819 BC035004	698582	-	BC042393 NM_001171195 TSC_hg19_v1_chr9_-_23821847	698613	-	AJ290954|DMRTA1|63951|DMRT-like family A1##AK130018|DMRTA1|63951|DMRT-like family A1##AK096011|DMRTA1|63951|DMRT-like family A1##NM_022160|DMRTA1|63951|DMRT-like family A1##BC130435|DMRTA1|63951|DMRT-like family A1##BC130437|DMRTA1|63951|DMRT-like family A1##BC030692|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171197|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC035004|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC042393|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171195|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	0.99848	CTCF.p2:0:0.998
chr17	25782926	25783091	reg1016095.p1	8.544	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-161727	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-161886	+	NM_001190452	-3760572	+	BC035488 BC042106 NM_014238	16021	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	175160	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	175195	+	AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.996945	CTCF.p2:8:0.997
chr2	223662162	223662259	reg1016024.p1	8.544	+	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	-125801	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	-141416	-	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	-372903	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	63537	+	NM_080671 TSC_hg19_v1_chr2_+_223916907 DQ192293 AK313203 BC014429 AY065987	254687	+	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	804856	-	AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_080671|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##DQ192293|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AK313203|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##BC014429|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AY065987|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II	0.279142	CTCF.p2:-5:0.279
chr13	112126918	112127051	reg1015348.p2	8.543	+	BC029889 NM_152324	-153970	+	AK300272 TSC_hg19_v1_chr13_+_111855425	-271562	+	NM_001113513 BC050521	-287798	+	NM_005986	594928	+	AK130866 NM_145248 BC016750	903675	+	AJ003061 AJ003062 BT009772 CU680680 DQ891072 DQ894255 AF042378 TSC_hg19_v1_chr13_-_113242450 BC013781 AK302537 BC007763	1115388	-	BC029889|C13orf16|121793|chromosome 13 open reading frame 16##NM_152324|C13orf16|121793|chromosome 13 open reading frame 16##AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113513|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC050521|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_005986|SOX1|6656|SRY (sex determining region Y)-box 1##AK130866|SPACA7|122258|sperm acrosome associated 7##NM_145248|SPACA7|122258|sperm acrosome associated 7##BC016750|SPACA7|122258|sperm acrosome associated 7##AJ003061|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AJ003062|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BT009772|TUBGCP3|10426|tubulin, gamma complex associated protein 3##DQ891072|TUBGCP3|10426|tubulin, gamma complex associated protein 3##DQ894255|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AF042378|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC013781|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK302537|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC007763|TUBGCP3|10426|tubulin, gamma complex associated protein 3	0.99567	CTCF.p2:-8:0.996
chr13	52702005	52702125	reg1017515.p1	8.543	+	BC073862 D87455 NM_021645	-103313	+	TSC_hg19_v1_chr13_+_52586546 NM_001004127 BC142998 AK296747 AK092428 AX747540 BC108677 BC111022 AK025456 BC143059 BC150316	-115530	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	-116515	-	BC063885 NM_199289	1148	-	NM_152720 TSC_hg19_v1_chr13_-_52733672 BC019916 AK290259	31661	-	NM_001146099 NM_002498	31930	-	BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)##NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)##NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC063885|NEK5|341676|NIMA (never in mitosis gene a)-related kinase 5##NM_199289|NEK5|341676|NIMA (never in mitosis gene a)-related kinase 5##NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3	0.844102	CTCF.p2:0:0.844
chr1	117139015	117139130	reg1015116.p1	8.542	+	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	-25395	-	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	-25457	-	TSC_hg19_v1_chr1_-_116961216 AK309389	-177834	-	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	71311	-	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	158035	+	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	313570	+	AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK309389|ATP1A1OS|84852|ATP1A1 opposite strand##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3##AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator	0.973443	CTCF.p2:1:0.973
chr5	147823633	147823757	reg1016595.p1	8.542	+	TSC_hg19_v1_chr5_+_147795459 BC005849 BC005873 AL832841	-28170	+	BC050424 TSC_hg19_v1_chr5_+_147774324 AB385244 CU689628	-49389	+	TSC_hg19_v1_chr5_+_147763577 BC033454 AK024024	-60118	+	AJ633645 AM712912 Y10437 Y13584 AJ011371 BC095497 Y09586 AJ131725 AJ131726 AJ278979 AJ278980 AJ278981 AJ278982 Y08756 Y12505 Y12506 Y12507 AJ519673 BC074755 NM_001040169 NM_001040172 NM_001040173 NM_199453	192904	-	AJ131724 TSC_hg19_v1_chr5_-_148033739 NM_000870	210032	-	AK308471 TSC_hg19_v1_chr5_-_148034091	210395	-	BC005849|FBXO38|81545|F-box protein 38##BC005873|FBXO38|81545|F-box protein 38##AL832841|FBXO38|81545|F-box protein 38##BC050424|FBXO38|81545|F-box protein 38##BC033454|FBXO38|81545|F-box protein 38##AK024024|FBXO38|81545|F-box protein 38##AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131724|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000870|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	0.877285	CTCF.p2:-27:0.877
chr12	74931115	74931250	reg1012846.p1	8.541	+	TSC_hg19_v1_chr12_-_72667288 BC040230	-2263912	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	-2264678	+	AK095156 TSC_hg19_v1_chr12_-_72666355	-2264839	-	NM_001136262 TSC_hg19_v1_chr12_+_74931614 AK056642	403	+	TSC_hg19_v1_chr12_+_74931622 BC009111 AL713650	457	+	AK054742 TSC_hg19_v1_chr12_+_74933681	2438	+	BC040230|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AK095156|LOC283392|283392|uncharacterized LOC283392##NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B##AK056642|ATXN7L3B|552889|ataxin 7-like 3B##BC009111|ATXN7L3B|552889|ataxin 7-like 3B##AL713650|ATXN7L3B|552889|ataxin 7-like 3B	0.785764	CTCF.p2:0:0.786
chr1	39558162	39558273	reg1014255.p2	8.541	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-11129	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	-66209	+	TSC_hg19_v1_chr1_+_39456956 NM_001136275 NM_024595 AK022728 AK092624 AX747634 AK124799 AK126262 AK223276 AK298890 AK303098 BC001498 BC119745 BC119746 AY326465	-101155	+	NM_015038	316958	+	TSC_hg19_v1_chr1_+_39922264 AK023821	364102	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	399128	+	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_001136275|AKIRIN1|79647|akirin 1##NM_024595|AKIRIN1|79647|akirin 1##AK022728|AKIRIN1|79647|akirin 1##AK092624|AKIRIN1|79647|akirin 1##AK124799|AKIRIN1|79647|akirin 1##AK126262|AKIRIN1|79647|akirin 1##AK223276|AKIRIN1|79647|akirin 1##AK298890|AKIRIN1|79647|akirin 1##AK303098|AKIRIN1|79647|akirin 1##BC001498|AKIRIN1|79647|akirin 1##BC119745|AKIRIN1|79647|akirin 1##BC119746|AKIRIN1|79647|akirin 1##AY326465|AKIRIN1|79647|akirin 1##NM_015038|KIAA0754|643314|KIAA0754##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a	0.0	
chr18	5023437	5023572	reg1015483.p2	8.541	+	AK316099 NM_001242761 NM_004746 TSC_hg19_v1_chr18_-_4455271	-568234	-	AK304101 TSC_hg19_v1_chr18_-_4455255	-568251	-	AK294777 AK294717 NM_001242762 NM_001242763	-1148777	-	TSC_hg19_v1_chr18_-_5197257 NM_001145194	173748	-	TSC_hg19_v1_chr18_+_5238098 AK056929 BC041875	214599	+	TSC_hg19_v1_chr18_-_5295610 NM_001243702	272149	-	AK316099|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242761|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_004746|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK304101|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42##NM_001243702|ZFP161|7541|zinc finger protein 161 homolog (mouse)	0.994127	CTCF.p2:2:0.994
chr9	32378654	32378786	reg1012391.p1	8.541	+	AK056372 NM_152570	-3659418	-	AK057806 JN681271 NM_145005	-4804879	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-4805249	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	5870	+	TSC_hg19_v1_chr9_+_32384622 AK057904	5907	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	5929	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.72902	CTCF.p2:-28:0.729
chr12	94997354	94997492	reg1016622.p1	8.540	+	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-143691	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-143781	-	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	-143892	-	EU831778 EU831856 BC040535 NM_020698	46841	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	400047	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	400093	-	BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	0.99952	CTCF.p2:2:1.000
chr17	57991758	57991882	reg1014289.p1	8.540	+	TSC_hg19_v1_chr17_+_57970492 AK300202 AK312875 BC053365 M60724 AB384946 CU690966 AK297147	-21278	+	NM_003161 BC036033 TSC_hg19_v1_chr17_+_57970481 AK293247	-21358	+	AK024096 AK298492 AK301312 BC000258 AK022771 AK315172 NM_001193609 NM_001193610 NM_001193611 NM_001193612 NM_001193613 NM_016261	-21629	-	TSC_hg19_v1_chr17_-_58042085 AK295162 BC088365	50258	-	BC006971 TSC_hg19_v1_chr17_-_58042099 AK294806 AK296197 NM_016125	50287	-	TSC_hg19_v1_chr17_-_58156283 AK127708 AK314655 BC119771 BC119813 BX640819 BX640831 CR627418 NM_022070 AF349752	164534	-	AK300202|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK312875|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC053365|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##M60724|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK297147|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK024096|TUBD1|51174|tubulin, delta 1##AK298492|TUBD1|51174|tubulin, delta 1##AK301312|TUBD1|51174|tubulin, delta 1##BC000258|TUBD1|51174|tubulin, delta 1##AK022771|TUBD1|51174|tubulin, delta 1##AK315172|TUBD1|51174|tubulin, delta 1##NM_001193609|TUBD1|51174|tubulin, delta 1##NM_001193610|TUBD1|51174|tubulin, delta 1##NM_001193611|TUBD1|51174|tubulin, delta 1##NM_001193612|TUBD1|51174|tubulin, delta 1##NM_001193613|TUBD1|51174|tubulin, delta 1##NM_016261|TUBD1|51174|tubulin, delta 1##AK295162|RNFT1|51136|ring finger protein, transmembrane 1##BC088365|RNFT1|51136|ring finger protein, transmembrane 1##BC006971|RNFT1|51136|ring finger protein, transmembrane 1##AK294806|RNFT1|51136|ring finger protein, transmembrane 1##AK296197|RNFT1|51136|ring finger protein, transmembrane 1##NM_016125|RNFT1|51136|ring finger protein, transmembrane 1##AK127708|HEATR6|63897|HEAT repeat containing 6##AK314655|HEATR6|63897|HEAT repeat containing 6##BC119771|HEATR6|63897|HEAT repeat containing 6##BC119813|HEATR6|63897|HEAT repeat containing 6##BX640819|HEATR6|63897|HEAT repeat containing 6##BX640831|HEATR6|63897|HEAT repeat containing 6##CR627418|HEATR6|63897|HEAT repeat containing 6##NM_022070|HEATR6|63897|HEAT repeat containing 6##AF349752|HEATR6|63897|HEAT repeat containing 6	0.99987	CTCF.p2:-7:1.000
chr1	93214720	93214833	reg1015332.p1	8.540	+	U67369 NM_005263 TSC_hg19_v1_chr1_-_92952458	-262326	-	BC032751 TSC_hg19_v1_chr1_-_92951630 NM_001127216	-263161	-	TSC_hg19_v1_chr1_-_92949508 AK123009	-265244	-	AB449875 AB587441 AF008915 AF042345 NM_005665	43179	-	TSC_hg19_v1_chr1_+_93297596 NM_000969 AK092963 AK095815 AK314720 AB055762	82788	+	TSC_hg19_v1_chr1_+_93297612 BC109370	82829	+	U67369|GFI1|2672|growth factor independent 1 transcription repressor##NM_005263|GFI1|2672|growth factor independent 1 transcription repressor##BC032751|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127216|GFI1|2672|growth factor independent 1 transcription repressor##AK123009|GFI1|2672|growth factor independent 1 transcription repressor##AB449875|EVI5|7813|ecotropic viral integration site 5##AF008915|EVI5|7813|ecotropic viral integration site 5##NM_005665|EVI5|7813|ecotropic viral integration site 5##NM_000969|RPL5|6125|ribosomal protein L5##AK092963|RPL5|6125|ribosomal protein L5##AK095815|RPL5|6125|ribosomal protein L5##AK314720|RPL5|6125|ribosomal protein L5##AB055762|RPL5|6125|ribosomal protein L5##BC109370|RPL5|6125|ribosomal protein L5	0.989471	CTCF.p2:-22:0.989
chr17	21415027	21415175	reg1018999.p1	8.539	+	FJ434338 NM_001194958	-106654	+	TSC_hg19_v1_chr17_+_21279667 BC027982 NM_021012	-135419	+	NM_002756	-223754	+	TSC_hg19_v1_chr17_-_21454933 AK056436 BC132738 BC136630 BC019938 BC010612 BC052777 BC053952 NM_001113434	39822	-	NM_001190452	607335	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	4206021	+	FJ434338|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##NM_001194958|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##BC027982|KCNJ12|3768|potassium inwardly-rectifying channel, subfamily J, member 12##NM_021012|KCNJ12|3768|potassium inwardly-rectifying channel, subfamily J, member 12##NM_002756|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK056436|C17orf51|339263|chromosome 17 open reading frame 51##BC132738|C17orf51|339263|chromosome 17 open reading frame 51##BC136630|C17orf51|339263|chromosome 17 open reading frame 51##BC019938|C17orf51|339263|chromosome 17 open reading frame 51##BC010612|C17orf51|339263|chromosome 17 open reading frame 51##BC052777|C17orf51|339263|chromosome 17 open reading frame 51##BC053952|C17orf51|339263|chromosome 17 open reading frame 51##NM_001113434|C17orf51|339263|chromosome 17 open reading frame 51##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1	0.082588	
chr3	8459189	8459320	reg1018069.p1	8.539	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	-1556356	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	-1556455	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-3229763	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	84076	-	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	84261	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	84327	+	X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1	0.999317	CTCF.p2:8:0.999
chr5	79968107	79968223	reg1017351.p1	8.539	+	TSC_hg19_v1_chr5_-_79950786 BC003584 BC071996 NM_000791	-17370	-	BC004177 BC011817 BC098436 TSC_hg19_v1_chr5_+_79950543 U61981 BC017273	-17645	+	TSC_hg19_v1_chr5_+_79950481 J04810	-17682	+	TSC_hg19_v1_chr5_+_80256463 BC126112 BC136296 BC143870 NM_006909	288317	+	AF023130 AF181250 TSC_hg19_v1_chr5_+_80256561	288394	+	NM_001099735 NM_001099736 NM_001825 TSC_hg19_v1_chr5_+_80529140 AK313293 BC029140 AK122769	560983	+	BC003584|DHFR|1719|dihydrofolate reductase##BC071996|DHFR|1719|dihydrofolate reductase##NM_000791|DHFR|1719|dihydrofolate reductase##BC004177|MSH3|4437|mutS homolog 3 (E. coli)##BC011817|MSH3|4437|mutS homolog 3 (E. coli)##BC098436|MSH3|4437|mutS homolog 3 (E. coli)##U61981|MSH3|4437|mutS homolog 3 (E. coli)##BC017273|MSH3|4437|mutS homolog 3 (E. coli)##J04810|MSH3|4437|mutS homolog 3 (E. coli)##BC126112|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC136296|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC143870|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_006909|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF023130|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF181250|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_001099735|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001099736|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001825|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK313293|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##BC029140|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK122769|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)	0.355198	CTCF.p2:-5:0.284
chr1	35208403	35208516	reg1015910.p2	8.538	+	NM_001134734	-565907	+	AK123355 NM_032884 BC007637	-575860	+	AY210418 NM_052896	-577017	-	AK129509 BC004379 NM_005268	12224	+	AK057628 NM_153212	16882	+	AK026139 NM_024009 TSC_hg19_v1_chr1_+_35246807	38347	+	NM_001134734|C1orf94|84970|chromosome 1 open reading frame 94##AK123355|C1orf94|84970|chromosome 1 open reading frame 94##NM_032884|C1orf94|84970|chromosome 1 open reading frame 94##BC007637|C1orf94|84970|chromosome 1 open reading frame 94##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2##AK129509|GJB5|2709|gap junction protein, beta 5, 31.1kDa##BC004379|GJB5|2709|gap junction protein, beta 5, 31.1kDa##NM_005268|GJB5|2709|gap junction protein, beta 5, 31.1kDa##AK057628|GJB4|127534|gap junction protein, beta 4, 30.3kDa##NM_153212|GJB4|127534|gap junction protein, beta 4, 30.3kDa##AK026139|GJB3|2707|gap junction protein, beta 3, 31kDa##NM_024009|GJB3|2707|gap junction protein, beta 3, 31kDa	0.846206	CTCF.p2:0:0.846
chr3	123965952	123966081	reg1017062.p1	8.538	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-152411	+	AF303889 NM_017578	-255818	-	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	-285761	-	TSC_hg19_v1_chr3_+_124103674 AK131379	137607	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	337512	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	483223	+	AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14##AK131379|KALRN|8997|kalirin, RhoGEF kinase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase	1.006556	CTCF.p2:15:0.975
chr4	113135964	113136104	reg1017917.p1	8.538	+	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	-69420	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1572756	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1577865	-	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	17050	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	70967	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	82493	+	BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1	0.961337	CTCF.p2:-4:0.961
chr4	145982588	145982763	reg1015264.p2	8.538	+	NM_022475 AY009951 TSC_hg19_v1_chr4_+_145567307 AY009317 BC025311 BC015636 BC009298	-415427	+	AY950614 DQ893046 L07251 L07253 S77893 U00177 U00178 U00179 X57023 M12857 M36281 X51798 BC013328 EU338231 EU338232 EU338233 EU338234 L31860 X08054 BC005319 AK290561 NM_002099	-920830	-	AY509882 AY509883 AY950609 AY950610 AY950611 AY950612 U05255 J02982 BC121077 BC121078 EU338223 EU338224 EU338225 EU338226 EU338227 EU338228 EU338229 EU338230 EU338235 EU338236 EU338237 EU338238 BC069310 X08055 NM_002100	-1042208	-	NM_001040876 NM_002940	36480	+	TSC_hg19_v1_chr4_-_146019349 AF132794 AL080090 BC005217 AB012109 NM_014885	36662	-	TSC_hg19_v1_chr4_+_146019465 AK315198 AB062293	36751	+	NM_022475|HHIP|64399|hedgehog interacting protein##AY009951|HHIP|64399|hedgehog interacting protein##AY009317|HHIP|64399|hedgehog interacting protein##BC025311|HHIP|64399|hedgehog interacting protein##BC015636|HHIP|64399|hedgehog interacting protein##BC009298|HHIP|64399|hedgehog interacting protein##AY950614|GYPA|2993|glycophorin A (MNS blood group)##DQ893046|GYPA|2993|glycophorin A (MNS blood group)##L07251|GYPA|2993|glycophorin A (MNS blood group)##L07253|GYPA|2993|glycophorin A (MNS blood group)##U00177|GYPA|2993|glycophorin A (MNS blood group)##U00178|GYPA|2993|glycophorin A (MNS blood group)##U00179|GYPA|2993|glycophorin A (MNS blood group)##X57023|GYPA|2993|glycophorin A (MNS blood group)##M12857|GYPA|2993|glycophorin A (MNS blood group)##M36281|GYPA|2993|glycophorin A (MNS blood group)##X51798|GYPA|2993|glycophorin A (MNS blood group)##BC013328|GYPA|2993|glycophorin A (MNS blood group)##EU338231|GYPA|2993|glycophorin A (MNS blood group)##EU338232|GYPA|2993|glycophorin A (MNS blood group)##EU338233|GYPA|2993|glycophorin A (MNS blood group)##EU338234|GYPA|2993|glycophorin A (MNS blood group)##L31860|GYPA|2993|glycophorin A (MNS blood group)##X08054|GYPA|2993|glycophorin A (MNS blood group)##BC005319|GYPA|2993|glycophorin A (MNS blood group)##AK290561|GYPA|2993|glycophorin A (MNS blood group)##NM_002099|GYPA|2993|glycophorin A (MNS blood group)##AY509882|GYPB|2994|glycophorin B (MNS blood group)##AY509883|GYPB|2994|glycophorin B (MNS blood group)##AY950609|GYPB|2994|glycophorin B (MNS blood group)##AY950610|GYPB|2994|glycophorin B (MNS blood group)##AY950611|GYPB|2994|glycophorin B (MNS blood group)##U05255|GYPB|2994|glycophorin B (MNS blood group)##J02982|GYPB|2994|glycophorin B (MNS blood group)##BC121077|GYPB|2994|glycophorin B (MNS blood group)##BC121078|GYPB|2994|glycophorin B (MNS blood group)##EU338223|GYPB|2994|glycophorin B (MNS blood group)##EU338224|GYPB|2994|glycophorin B (MNS blood group)##EU338225|GYPB|2994|glycophorin B (MNS blood group)##EU338226|GYPB|2994|glycophorin B (MNS blood group)##EU338227|GYPB|2994|glycophorin B (MNS blood group)##EU338228|GYPB|2994|glycophorin B (MNS blood group)##EU338229|GYPB|2994|glycophorin B (MNS blood group)##EU338230|GYPB|2994|glycophorin B (MNS blood group)##EU338235|GYPB|2994|glycophorin B (MNS blood group)##EU338236|GYPB|2994|glycophorin B (MNS blood group)##EU338237|GYPB|2994|glycophorin B (MNS blood group)##EU338238|GYPB|2994|glycophorin B (MNS blood group)##BC069310|GYPB|2994|glycophorin B (MNS blood group)##X08055|GYPB|2994|glycophorin B (MNS blood group)##NM_002100|GYPB|2994|glycophorin B (MNS blood group)##NM_001040876|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##NM_002940|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##AF132794|ANAPC10|10393|anaphase promoting complex subunit 10##AL080090|ANAPC10|10393|anaphase promoting complex subunit 10##BC005217|ANAPC10|10393|anaphase promoting complex subunit 10##AB012109|ANAPC10|10393|anaphase promoting complex subunit 10##NM_014885|ANAPC10|10393|anaphase promoting complex subunit 10##AK315198|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##AB062293|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1	0.480291	CTCF.p2:11:0.480
chr7	134434970	134435100	reg1015178.p2	8.534	+	NM_001724 NM_199186 TSC_hg19_v1_chr7_+_134331586 BC017050 AK315439 AK097778 X04327	-103450	+	NM_001080538	-201187	+	AF524864 NM_020299 BC008837	-222665	+	TSC_hg19_v1_chr7_+_134464170 NM_004342 NM_033138 NM_033157 AK289686	29131	+	TSC_hg19_v1_chr7_+_134464387 AK298524 AK304729 AF247820 M83216	29354	+	TSC_hg19_v1_chr7_+_134464419 BC040354	29387	+	NM_001724|BPGM|669|2,3-bisphosphoglycerate mutase##NM_199186|BPGM|669|2,3-bisphosphoglycerate mutase##BC017050|BPGM|669|2,3-bisphosphoglycerate mutase##AK315439|BPGM|669|2,3-bisphosphoglycerate mutase##AK097778|BPGM|669|2,3-bisphosphoglycerate mutase##X04327|BPGM|669|2,3-bisphosphoglycerate mutase##NM_001080538|AKR1B15|441282|aldo-keto reductase family 1, member B15##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_004342|CALD1|800|caldesmon 1##NM_033138|CALD1|800|caldesmon 1##NM_033157|CALD1|800|caldesmon 1##AK289686|CALD1|800|caldesmon 1##AK298524|CALD1|800|caldesmon 1##AK304729|CALD1|800|caldesmon 1##AF247820|CALD1|800|caldesmon 1##M83216|CALD1|800|caldesmon 1##BC040354|CALD1|800|caldesmon 1	0.999761	CTCF.p2:-5:1.000
chr8	58487929	58488052	reg1015703.p1	8.534	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-581564	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-581588	-	TSC_hg19_v1_chr8_-_57906381 BC017797	-581612	-	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	419167	+	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	835895	+	X56088 M93133 BC101777 BC112184 NM_000780	924717	-	AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	0.944518	CTCF.p2:-16:0.945
chr12	56040041	56040158	reg1015084.p1	8.533	+	BC136914 AB529283 NM_206899	-9440	+	BC137000 BC137001 NM_001005494	-95103	+	NM_001005519	-153938	+	AK290112 NM_152637 TSC_hg19_v1_chr12_+_56075356	35244	+	BC020509 TSC_hg19_v1_chr12_+_56075425 AY358508	35340	+	AF052050 AF072132 AY358882 TSC_hg19_v1_chr12_-_56101636 AF032108 AB210036	61461	-	BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1##NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1##BC137000|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##BC137001|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##NM_001005494|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68##AK290112|METTL7B|196410|methyltransferase like 7B##NM_152637|METTL7B|196410|methyltransferase like 7B##BC020509|METTL7B|196410|methyltransferase like 7B##AY358508|METTL7B|196410|methyltransferase like 7B##AF052050|ITGA7|3679|integrin, alpha 7##AF072132|ITGA7|3679|integrin, alpha 7##AY358882|ITGA7|3679|integrin, alpha 7##AF032108|ITGA7|3679|integrin, alpha 7##AB210036|ITGA7|3679|integrin, alpha 7	0.974082	CTCF.p2:1:0.963
chr1	65701713	65701833	reg1014563.p1	8.533	+	TSC_hg19_v1_chr1_+_65613971 BC040224 BC136886 BC136887 BC148270 CR456830 CU688216 DQ892294 DQ895494	-87743	+	TSC_hg19_v1_chr1_+_65613835 NM_013410 AK025926 AK313611 X60673	-87925	+	TSC_hg19_v1_chr1_+_65613263 NM_203464 BC146653 BC016180 AK309057 BC066944 NM_001005353	-88412	+	TSC_hg19_v1_chr1_+_65720144 AK123450 BC051722	18346	+	AK296408 NM_014787 AB007942	28656	+	BC140007 NM_001198683 NM_017526 TSC_hg19_v1_chr1_+_65886266	184429	+	BC040224|AK4|205|adenylate kinase 4##BC136886|AK4|205|adenylate kinase 4##BC136887|AK4|205|adenylate kinase 4##BC148270|AK4|205|adenylate kinase 4##CR456830|AK4|205|adenylate kinase 4##DQ892294|AK4|205|adenylate kinase 4##DQ895494|AK4|205|adenylate kinase 4##NM_013410|AK4|205|adenylate kinase 4##AK025926|AK4|205|adenylate kinase 4##AK313611|AK4|205|adenylate kinase 4##X60673|AK4|205|adenylate kinase 4##NM_203464|AK4|205|adenylate kinase 4##BC146653|AK4|205|adenylate kinase 4##BC016180|AK4|205|adenylate kinase 4##AK309057|AK4|205|adenylate kinase 4##BC066944|AK4|205|adenylate kinase 4##NM_001005353|AK4|205|adenylate kinase 4##AK123450|LOC645195|645195|uncharacterized LOC645195##BC051722|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##BC140007|LEPROT|54741|leptin receptor overlapping transcript##NM_001198683|LEPROT|54741|leptin receptor overlapping transcript##NM_017526|LEPROT|54741|leptin receptor overlapping transcript	0.564626	CTCF.p2:-11:0.565
chr17	56072918	56073035	reg1015127.p2	8.533	+	TSC_hg19_v1_chr17_-_56065610 NM_007146	-7358	-	AB464342 D28118 TSC_hg19_v1_chr17_-_56065593	-7442	-	TSC_hg19_v1_chr17_+_56065413 AB593183	-7502	+	CU679661 AB384975 TSC_hg19_v1_chr17_-_56084508	11527	-	TSC_hg19_v1_chr17_-_56084515 BC010264	11562	-	TSC_hg19_v1_chr17_-_56084589 AK225711 AB062124	11604	-	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1##D28118|VEZF1|7716|vascular endothelial zinc finger 1##BC010264|SRSF1|6426|serine/arginine-rich splicing factor 1##AK225711|SRSF1|6426|serine/arginine-rich splicing factor 1##AB062124|SRSF1|6426|serine/arginine-rich splicing factor 1	0.03877	
chr19	47539160	47539266	reg1014596.p1	8.533	+	AB054002 NM_002517 U77968	-15002	+	TSC_hg19_v1_chr19_+_47523068 BC039016	-16137	+	AB051509 AF159851 BC131565 BC150257 NM_004491	-117281	+	AK000519 NM_017854 TSC_hg19_v1_chr19_-_47551883 BC002907	12683	-	AK125279 TSC_hg19_v1_chr19_-_47615487	76273	-	TSC_hg19_v1_chr19_-_47615825 AB384098	76610	-	AB054002|NPAS1|4861|neuronal PAS domain protein 1##NM_002517|NPAS1|4861|neuronal PAS domain protein 1##U77968|NPAS1|4861|neuronal PAS domain protein 1##BC039016|NPAS1|4861|neuronal PAS domain protein 1##AB051509|ARHGAP35|2909|Rho GTPase activating protein 35##AF159851|ARHGAP35|2909|Rho GTPase activating protein 35##BC131565|ARHGAP35|2909|Rho GTPase activating protein 35##BC150257|ARHGAP35|2909|Rho GTPase activating protein 35##NM_004491|ARHGAP35|2909|Rho GTPase activating protein 35##AK000519|TMEM160|54958|transmembrane protein 160##NM_017854|TMEM160|54958|transmembrane protein 160##BC002907|TMEM160|54958|transmembrane protein 160##AK125279|ZC3H4|23211|zinc finger CCCH-type containing 4	0.689123	CTCF.p2:7:0.689
chr2	219860848	219860960	reg1015651.p2	8.533	+	AF166331 NM_005209 BC006285 NM_057093 NM_057094	-2781	-	BC023511 NM_017521 Y08976	-10579	-	TSC_hg19_v1_chr2_+_219824381 BC041771 NM_003936 U34051	-36495	+	AK127189 AK302678 AK302688 BC031585 NM_152389 NM_194302 BC047637	45338	-	BC136587 BC136588 NM_002181	64333	-	TSC_hg19_v1_chr2_-_220025558 BC012732 AK022672 AJ972687 BC030986 NM_024782	164635	-	AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2##BC023511|FEV|54738|FEV (ETS oncogene family)##NM_017521|FEV|54738|FEV (ETS oncogene family)##Y08976|FEV|54738|FEV (ETS oncogene family)##BC041771|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##NM_003936|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##U34051|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##AK127189|CCDC108|255101|coiled-coil domain containing 108##AK302678|CCDC108|255101|coiled-coil domain containing 108##AK302688|CCDC108|255101|coiled-coil domain containing 108##BC031585|CCDC108|255101|coiled-coil domain containing 108##NM_152389|CCDC108|255101|coiled-coil domain containing 108##NM_194302|CCDC108|255101|coiled-coil domain containing 108##BC047637|CCDC108|255101|coiled-coil domain containing 108##BC136587|IHH|3549|Indian hedgehog##BC136588|IHH|3549|Indian hedgehog##NM_002181|IHH|3549|Indian hedgehog##BC012732|NHEJ1|79840|nonhomologous end-joining factor 1##AK022672|NHEJ1|79840|nonhomologous end-joining factor 1##AJ972687|NHEJ1|79840|nonhomologous end-joining factor 1##BC030986|NHEJ1|79840|nonhomologous end-joining factor 1##NM_024782|NHEJ1|79840|nonhomologous end-joining factor 1	0.9997	CTCF.p2:7:1.000
chr11	13356906	13357054	reg1018551.p1	8.532	+	TSC_hg19_v1_chr11_+_13299403 BC031214 BC034314	-57525	+	TSC_hg19_v1_chr11_+_13299376 AF044288 AK095749	-57598	+	TSC_hg19_v1_chr11_+_13299375 U60415	-57607	+	AK298226 TSC_hg19_v1_chr11_-_13484770 AK310935 AK292392 AK095946 BC005071 AL832981 NM_032320 AF329102	127811	-	V00597 BC096142 BC096143 BC096144 BC096145 NM_000315	160565	-	TSC_hg19_v1_chr11_+_13690212 NM_032228 AY358784	333210	+	BC031214|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AF044288|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK095749|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##U60415|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK298226|BTBD10|84280|BTB (POZ) domain containing 10##AK310935|BTBD10|84280|BTB (POZ) domain containing 10##AK292392|BTBD10|84280|BTB (POZ) domain containing 10##AK095946|BTBD10|84280|BTB (POZ) domain containing 10##BC005071|BTBD10|84280|BTB (POZ) domain containing 10##AL832981|BTBD10|84280|BTB (POZ) domain containing 10##NM_032320|BTBD10|84280|BTB (POZ) domain containing 10##AF329102|BTBD10|84280|BTB (POZ) domain containing 10##V00597|PTH|5741|parathyroid hormone##BC096142|PTH|5741|parathyroid hormone##BC096143|PTH|5741|parathyroid hormone##BC096144|PTH|5741|parathyroid hormone##BC096145|PTH|5741|parathyroid hormone##NM_000315|PTH|5741|parathyroid hormone##NM_032228|FAR1|84188|fatty acyl CoA reductase 1##AY358784|FAR1|84188|fatty acyl CoA reductase 1	0.454394	CTCF.p2:3:0.454
chr12	53584006	53584131	reg1016015.p1	8.532	+	TSC_hg19_v1_chr12_-_53575136 AK296885	-8937	-	AK289659 BC052249 NM_001244705	-9377	-	TSC_hg19_v1_chr12_+_53574527 BC053557 NM_001004304	-9516	+	M68892 NM_000889 S80335 TSC_hg19_v1_chr12_-_53601036 AK298239 AK301523 AK311703	16954	-	TSC_hg19_v1_chr12_-_53601066 AK300960	17004	-	HQ692829 TSC_hg19_v1_chr12_-_53613945 AK316259 M32074 AK297801	29894	-	AK296885|CSAD|51380|cysteine sulfinic acid decarboxylase##AK289659|CSAD|51380|cysteine sulfinic acid decarboxylase##BC052249|CSAD|51380|cysteine sulfinic acid decarboxylase##NM_001244705|CSAD|51380|cysteine sulfinic acid decarboxylase##BC053557|ZNF740|283337|zinc finger protein 740##NM_001004304|ZNF740|283337|zinc finger protein 740##M68892|ITGB7|3695|integrin, beta 7##NM_000889|ITGB7|3695|integrin, beta 7##S80335|ITGB7|3695|integrin, beta 7##AK298239|ITGB7|3695|integrin, beta 7##AK301523|ITGB7|3695|integrin, beta 7##AK311703|ITGB7|3695|integrin, beta 7##AK300960|ITGB7|3695|integrin, beta 7##HQ692829|RARG|5916|retinoic acid receptor, gamma##AK316259|RARG|5916|retinoic acid receptor, gamma##M32074|RARG|5916|retinoic acid receptor, gamma##AK297801|RARG|5916|retinoic acid receptor, gamma	0.947313	CTCF.p2:9:0.947
chr5	1174639	1174772	reg1014655.p1	8.532	+	CU675797 AF105365 TSC_hg19_v1_chr5_-_1112151 AK302856 BC098390 BC007760 BC018982 NM_006598	-62548	-	TSC_hg19_v1_chr5_+_1008916 BC012176 AF358137 AB062887 NM_033120	-165672	+	TSC_hg19_v1_chr5_-_997422 AK126199 NM_001242737	-177270	-	AK096054 AK290811 NM_001003841 BC146290 BC148801 AB527217 AY591756 AY596807	27032	+	AK055798 NM_182632 AK298257 BC056757	50785	+	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	120386	-	AF105365|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK302856|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC098390|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC007760|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC018982|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##NM_006598|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC012176|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF358137|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AB062887|NKD2|85409|naked cuticle homolog 2 (Drosophila)##NM_033120|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AK126199|LOC100506688|100506688|uncharacterized LOC100506688##NM_001242737|LOC100506688|100506688|uncharacterized LOC100506688##AK096054|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK290811|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##NM_001003841|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC146290|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC148801|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY591756|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY596807|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK055798|SLC6A18|348932|solute carrier family 6, member 18##NM_182632|SLC6A18|348932|solute carrier family 6, member 18##AK298257|SLC6A18|348932|solute carrier family 6, member 18##BC056757|SLC6A18|348932|solute carrier family 6, member 18##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase	1.034166	CTCF.p2:3:0.999
chr7	155561123	155561251	reg1014633.p2	8.532	+	TSC_hg19_v1_chr7_+_155437354 AK307515	-123819	+	TSC_hg19_v1_chr7_+_155437182 NM_053043	-123979	+	TSC_hg19_v1_chr7_+_155437147 BC011923	-124036	+	AY927450 AY927452 AY927453 AY927454 AY927455 TSC_hg19_v1_chr7_-_155601833	40611	-	AB464234 TSC_hg19_v1_chr7_-_155604951 L38518 NM_000193	43703	-	AF063598 TSC_hg19_v1_chr7_-_156433234 BC050364 BC058889 BC031037 BC070228 AK056371 AF439977	872044	-	AK307515|RBM33|155435|RNA binding motif protein 33##NM_053043|RBM33|155435|RNA binding motif protein 33##BC011923|RBM33|155435|RNA binding motif protein 33##AY927450|SHH|6469|sonic hedgehog##L38518|SHH|6469|sonic hedgehog##NM_000193|SHH|6469|sonic hedgehog##AF063598|C7orf13|129790|chromosome 7 open reading frame 13##BC050364|C7orf13|129790|chromosome 7 open reading frame 13##BC031037|C7orf13|129790|chromosome 7 open reading frame 13##BC070228|C7orf13|129790|chromosome 7 open reading frame 13##AK056371|C7orf13|129790|chromosome 7 open reading frame 13##AF439977|C7orf13|129790|chromosome 7 open reading frame 13	0.956242	CTCF.p2:21:0.956
chr11	57250612	57250731	reg1017038.p1	8.531	+	TSC_hg19_v1_chr11_+_57228149 BC113673 BC117276 BC143818 AF532858 AX751514 AY250221 DQ864979 NM_178570	-22439	+	NM_017611	-55619	-	TSC_hg19_v1_chr11_-_57194592 AK075552 AK298028 AK315839 NM_199329	-56079	-	AF045584 TSC_hg19_v1_chr11_-_57282334 BC001639 NM_001198810	31665	-	TSC_hg19_v1_chr11_-_57283184 AB103033 NM_003627	32501	-	AK289751 BC032133 TSC_hg19_v1_chr11_-_57298210 AF150089 NM_012456	47534	-	BC113673|RTN4RL2|349667|reticulon 4 receptor-like 2##BC117276|RTN4RL2|349667|reticulon 4 receptor-like 2##BC143818|RTN4RL2|349667|reticulon 4 receptor-like 2##AF532858|RTN4RL2|349667|reticulon 4 receptor-like 2##AX751514|RTN4RL2|349667|reticulon 4 receptor-like 2##AY250221|RTN4RL2|349667|reticulon 4 receptor-like 2##DQ864979|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_178570|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_017611|SLC43A3|29015|solute carrier family 43, member 3##AK075552|SLC43A3|29015|solute carrier family 43, member 3##AK298028|SLC43A3|29015|solute carrier family 43, member 3##AK315839|SLC43A3|29015|solute carrier family 43, member 3##NM_199329|SLC43A3|29015|solute carrier family 43, member 3##AF045584|SLC43A1|8501|solute carrier family 43, member 1##BC001639|SLC43A1|8501|solute carrier family 43, member 1##NM_001198810|SLC43A1|8501|solute carrier family 43, member 1##AB103033|SLC43A1|8501|solute carrier family 43, member 1##NM_003627|SLC43A1|8501|solute carrier family 43, member 1##AK289751|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##BC032133|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##AF150089|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##NM_012456|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)	0.312429	CTCF.p2:17:0.312
chr16	8985671	8985824	reg1015753.p2	8.531	+	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	-22887	-	NM_001042476 BC001333	-23495	-	NM_000303 TSC_hg19_v1_chr16_+_8891675 AK296123 U85773 AK300785 AK291537 AK299979 AK311035 AK312532 AK304320 AK296630 BC008310	-94049	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	71548	-	TSC_hg19_v1_chr16_+_9185545 NM_014117	199793	+	TSC_hg19_v1_chr16_+_9185577 BC113570	199856	+	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_000303|PMM2|5373|phosphomannomutase 2##U85773|PMM2|5373|phosphomannomutase 2##AK300785|PMM2|5373|phosphomannomutase 2##AK291537|PMM2|5373|phosphomannomutase 2##AK299979|PMM2|5373|phosphomannomutase 2##AK311035|PMM2|5373|phosphomannomutase 2##AK312532|PMM2|5373|phosphomannomutase 2##AK304320|PMM2|5373|phosphomannomutase 2##AK296630|PMM2|5373|phosphomannomutase 2##BC008310|PMM2|5373|phosphomannomutase 2##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##BC113570|C16orf72|29035|chromosome 16 open reading frame 72	0.082843	
chr1	44784040	44784146	reg1015289.p1	8.530	+	TSC_hg19_v1_chr1_+_44679145 NM_001034023 NM_001034024 NM_019100 AL136657 AK300372 BC002855 AK300442 AK293598 AK021605 AK289366 AK298793 AB037846 AL137200 BC008053 AK300217	-104950	+	BC049844 NM_173484 AK097479 BC035408 CU690622	-199544	+	TSC_hg19_v1_chr1_-_44497141 AK315933 NM_001024845	-286954	-	AB528814 TSC_hg19_v1_chr1_-_44820904 AF007157	36715	-	AK308597 TSC_hg19_v1_chr1_-_44820929 BC144384	36833	-	TSC_hg19_v1_chr1_-_44820938 AK290567 NM_024066	36843	-	NM_001034023|DMAP1|55929|DNA methyltransferase 1 associated protein 1##NM_001034024|DMAP1|55929|DNA methyltransferase 1 associated protein 1##NM_019100|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AL136657|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300372|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC002855|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300442|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK293598|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK021605|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK289366|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK298793|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AB037846|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AL137200|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC008053|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300217|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC049844|KLF17|128209|Kruppel-like factor 17##NM_173484|KLF17|128209|Kruppel-like factor 17##AK097479|KLF17|128209|Kruppel-like factor 17##BC035408|KLF17|128209|Kruppel-like factor 17##AK315933|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_001024845|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AF007157|ERI3|79033|ERI1 exoribonuclease family member 3##BC144384|ERI3|79033|ERI1 exoribonuclease family member 3##AK290567|ERI3|79033|ERI1 exoribonuclease family member 3##NM_024066|ERI3|79033|ERI1 exoribonuclease family member 3	0.999481	CTCF.p2:11:0.999
chr17	72755780	72755894	reg1016054.p1	8.530	+	TSC_hg19_v1_chr17_+_72744928 AB528945	-10883	+	TSC_hg19_v1_chr17_+_72744841 AF036241	-11011	+	TSC_hg19_v1_chr17_+_72744800 BC001443	-11040	+	AL050269 AK225602 AK312958 BC004225 AK308569 BC004195 NM_015654 TSC_hg19_v1_chr17_-_72772477 AK123115	16634	-	NM_017728 AK291159 TSC_hg19_v1_chr17_+_72772637 AK296621 AK000262 AK074029 BC011552 BC037278	16819	+	AL137521 BC037584 TSC_hg19_v1_chr17_+_72832152	76271	+	AF036241|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC001443|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AL050269|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK225602|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK312958|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##BC004225|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK308569|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##BC004195|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##NM_015654|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK123115|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##NM_017728|TMEM104|54868|transmembrane protein 104##AK291159|TMEM104|54868|transmembrane protein 104##AK296621|TMEM104|54868|transmembrane protein 104##AK000262|TMEM104|54868|transmembrane protein 104##AK074029|TMEM104|54868|transmembrane protein 104##BC011552|TMEM104|54868|transmembrane protein 104##BC037278|TMEM104|54868|transmembrane protein 104##AL137521|TMEM104|54868|transmembrane protein 104	0.754735	CTCF.p2:18:0.672
chr22	21096206	21096345	reg1016690.p1	8.530	+	L36151 NM_002650	-7321	-	TSC_hg19_v1_chr22_+_20918811 U80745	-177451	+	BC017110 TSC_hg19_v1_chr22_+_20909388	-186968	+	TSC_hg19_v1_chr22_+_21128411 NM_000185 AK314200 AK225292 BC035028	32121	+	AB384703 TSC_hg19_v1_chr22_-_21213029 AK302424	116755	-	AB210002 TSC_hg19_v1_chr22_-_21213071	116796	-	L36151|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_002650|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##U80745|MED15|51586|mediator complex subunit 15##BC017110|MED15|51586|mediator complex subunit 15##NM_000185|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK314200|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK225292|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##BC035028|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK302424|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##AB210002|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha	0.013319	
chr5	1167896	1168025	reg1003012.p1	8.530	+	CU675797 AF105365 TSC_hg19_v1_chr5_-_1112151 AK302856 BC098390 BC007760 BC018982 NM_006598	-55803	-	TSC_hg19_v1_chr5_+_1008916 BC012176 AF358137 AB062887 NM_033120	-158927	+	TSC_hg19_v1_chr5_-_997422 AK126199 NM_001242737	-170525	-	AK096054 AK290811 NM_001003841 BC146290 BC148801 AB527217 AY591756 AY596807	33777	+	AK055798 NM_182632 AK298257 BC056757	57530	+	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	127131	-	AF105365|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK302856|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC098390|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC007760|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC018982|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##NM_006598|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC012176|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF358137|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AB062887|NKD2|85409|naked cuticle homolog 2 (Drosophila)##NM_033120|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AK126199|LOC100506688|100506688|uncharacterized LOC100506688##NM_001242737|LOC100506688|100506688|uncharacterized LOC100506688##AK096054|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK290811|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##NM_001003841|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC146290|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC148801|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY591756|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY596807|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK055798|SLC6A18|348932|solute carrier family 6, member 18##NM_182632|SLC6A18|348932|solute carrier family 6, member 18##AK298257|SLC6A18|348932|solute carrier family 6, member 18##BC056757|SLC6A18|348932|solute carrier family 6, member 18##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase	0.811039	CTCF.p2:14:0.811
chr8	90409891	90410007	reg1015454.p2	8.530	+	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	-1070203	-	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	-1523690	-	AK093121 AX747937 BC117326 BC117328 NM_173538	-2531276	+	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	360081	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	360335	+	AF061326 NM_004337	504146	+	AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF061326|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_004337|OSGIN2|734|oxidative stress induced growth inhibitor family member 2	0.0	
chr1	172419194	172419311	reg1014841.p1	8.529	+	TSC_hg19_v1_chr1_-_172413210 AL035301 BC063473 NM_002642 NM_153747	-6024	-	TSC_hg19_v1_chr1_-_172413207 AK308201	-6045	-	TSC_hg19_v1_chr1_-_172413202 BC006539	-6064	-	TSC_hg19_v1_chr1_+_172502152 AK302949 AJ250075 NM_014283	82890	+	TSC_hg19_v1_chr1_+_172502291 NM_016227 AK302509 AL035291 BC137125 BC144487	83129	+	D38122 AK314874 NM_000639 X89102 BC017502 U08137 AF288573 U11821 AB528416 DQ893466 DQ896147 CU675998 AY225406 AY858799	208997	+	AL035301|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##BC063473|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##NM_002642|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##NM_153747|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK302949|C1orf9|51430|chromosome 1 open reading frame 9##AJ250075|C1orf9|51430|chromosome 1 open reading frame 9##NM_014283|C1orf9|51430|chromosome 1 open reading frame 9##NM_016227|C1orf9|51430|chromosome 1 open reading frame 9##AK302509|C1orf9|51430|chromosome 1 open reading frame 9##AL035291|C1orf9|51430|chromosome 1 open reading frame 9##BC137125|C1orf9|51430|chromosome 1 open reading frame 9##BC144487|C1orf9|51430|chromosome 1 open reading frame 9##D38122|FASLG|356|Fas ligand (TNF superfamily, member 6)##AK314874|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_000639|FASLG|356|Fas ligand (TNF superfamily, member 6)##X89102|FASLG|356|Fas ligand (TNF superfamily, member 6)##BC017502|FASLG|356|Fas ligand (TNF superfamily, member 6)##U08137|FASLG|356|Fas ligand (TNF superfamily, member 6)##AF288573|FASLG|356|Fas ligand (TNF superfamily, member 6)##U11821|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ893466|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ896147|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY225406|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY858799|FASLG|356|Fas ligand (TNF superfamily, member 6)	0.326785	CTCF.p2:-14:0.327
chr15	27134576	27134724	reg1018707.p1	8.529	+	L08485 AK290453 TSC_hg19_v1_chr15_+_27112237 NM_001165037	-22414	+	NM_000810	-22785	+	TSC_hg19_v1_chr15_-_27018924 AK315311 NM_021912	-115725	-	NM_033223 BC029850 BC045709 S82769	81897	+	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	1209783	-	AF071172 BC015486 BC142951 BC045544 NM_004667	1432621	-	L08485|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AK290453|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_001165037|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_000810|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AK315311|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_021912|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2	0.993373	CTCF.p2:-3:0.993
chr18	21078896	21079032	reg1018217.p1	8.528	+	TSC_hg19_v1_chr18_+_21033285 AF013591	-45660	+	TSC_hg19_v1_chr18_+_21033263 BC039729	-45694	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	-45718	+	TSC_hg19_v1_chr18_+_21083474 NM_013326 AK057192 AK295246 AK296230 AK294169 BC008305 BC002950	4510	+	TSC_hg19_v1_chr18_-_21166428 BC063302 AF002020	87444	-	TSC_hg19_v1_chr18_-_21166458 AK295715 NM_000271	87546	-	AF013591|RIOK3|8780|RIO kinase 3 (yeast)##BC039729|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)##NM_013326|C18orf8|29919|chromosome 18 open reading frame 8##AK057192|C18orf8|29919|chromosome 18 open reading frame 8##AK295246|C18orf8|29919|chromosome 18 open reading frame 8##AK296230|C18orf8|29919|chromosome 18 open reading frame 8##AK294169|C18orf8|29919|chromosome 18 open reading frame 8##BC008305|C18orf8|29919|chromosome 18 open reading frame 8##BC002950|C18orf8|29919|chromosome 18 open reading frame 8##BC063302|NPC1|4864|Niemann-Pick disease, type C1##AF002020|NPC1|4864|Niemann-Pick disease, type C1##AK295715|NPC1|4864|Niemann-Pick disease, type C1##NM_000271|NPC1|4864|Niemann-Pick disease, type C1	0.967675	CTCF.p2:-9:0.968
chr2	92083257	92083389	reg1016731.p1	8.528	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-235320	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-1871605	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-2005569	+	AK097438 BC021716 NM_144705 AK296678 CU692394	3453927	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	3608159	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	3704219	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.011283	
chr1	22432259	22432375	reg1015137.p1	8.527	+	TSC_hg19_v1_chr1_+_22379812 AL121737	-52512	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	-53147	+	TSC_hg19_v1_chr1_+_22352003 AF161506 BC016053	-80305	+	AY009398 BT020125 AB590593 AB061675 AY358947 AF316543 NM_030761 BC057781	37194	-	AK091019 AK095273 AX746732 NM_001083621 NM_014870 TSC_hg19_v1_chr1_+_22778343	346027	+	TSC_hg19_v1_chr1_+_22778350 AB007947 BC114607	346109	+	AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AF161506|LINC00339|29092|long intergenic non-protein coding RNA 339##BC016053|LINC00339|29092|long intergenic non-protein coding RNA 339##AY009398|WNT4|54361|wingless-type MMTV integration site family, member 4##BT020125|WNT4|54361|wingless-type MMTV integration site family, member 4##AB061675|WNT4|54361|wingless-type MMTV integration site family, member 4##AY358947|WNT4|54361|wingless-type MMTV integration site family, member 4##AF316543|WNT4|54361|wingless-type MMTV integration site family, member 4##NM_030761|WNT4|54361|wingless-type MMTV integration site family, member 4##BC057781|WNT4|54361|wingless-type MMTV integration site family, member 4##AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40##AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40##AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40##BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40	0.997003	CTCF.p2:0:0.997
chr4	63575510	63575628	reg1013502.p2	8.527	+	NM_015236	-1212731	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-1508594	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-5599001	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	1699527	-	AK307826 NM_004439 NM_182472	2960083	-	TSC_hg19_v1_chr4_-_66536182 AB209375	2960628	-	NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.796447	CTCF.p2:-5:0.796
chr6	63776108	63776208	reg1015070.p1	8.527	+	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	-780157	-	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	-5488479	-	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	-6593743	+	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	253706	-	TSC_hg19_v1_chr6_+_64231650 CR749458	455497	+	TSC_hg19_v1_chr6_+_64281913 BC045571 NM_003463	505758	+	AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	0.888027	CTCF.p2:4:0.888
chr8	98834366	98834470	reg1015521.p2	8.527	+	TSC_hg19_v1_chr8_+_98788065 BC031021 AK075326 BC014129 AL136942 AK311377 AX810698 AB528832 AF317417 AM392726 AM393691	-46293	+	AY057051 AY261384 NM_018407 AF527412 TSC_hg19_v1_chr8_+_98787993	-46517	+	AK308030 TSC_hg19_v1_chr8_+_98703378	-131040	+	TSC_hg19_v1_chr8_+_98881340 NM_002380 NM_030583 BC010444 AY358895 AK075489 AL833931 AL137638	46911	+	AB591031 X79238 BC032700 TSC_hg19_v1_chr8_-_99057620	223190	-	L05095 TSC_hg19_v1_chr8_-_99057755	223335	-	BC031021|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK075326|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##BC014129|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AL136942|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK311377|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF317417|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AM392726|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AM393691|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AY057051|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AY261384|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##NM_018407|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF527412|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK308030|MTDH|92140|metadherin##NM_002380|MATN2|4147|matrilin 2##NM_030583|MATN2|4147|matrilin 2##BC010444|MATN2|4147|matrilin 2##AY358895|MATN2|4147|matrilin 2##AK075489|MATN2|4147|matrilin 2##AL833931|MATN2|4147|matrilin 2##AL137638|MATN2|4147|matrilin 2##X79238|RPL30|6156|ribosomal protein L30##BC032700|RPL30|6156|ribosomal protein L30##L05095|RPL30|6156|ribosomal protein L30	0.98443	CTCF.p2:3:0.984
chr14	76175682	76175806	reg1015013.p1	8.526	+	TSC_hg19_v1_chr14_+_76127671 BC136472 BC136473	-48081	+	TSC_hg19_v1_chr14_+_76127610 AK309748 AY237126 BC002766	-48127	+	NM_015072 TSC_hg19_v1_chr14_+_76127588 BC110652	-48175	+	BT007287 AB590825 TSC_hg19_v1_chr14_-_76447259	271503	-	TSC_hg19_v1_chr14_-_76447323 BC018503 EF560714	271586	-	AK313564 TSC_hg19_v1_chr14_-_76447479 X14149 J03241	271727	-	BC136472|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BC136473|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##AK309748|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##AY237126|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##NM_015072|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BC110652|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BT007287|TGFB3|7043|transforming growth factor, beta 3##BC018503|TGFB3|7043|transforming growth factor, beta 3##EF560714|TGFB3|7043|transforming growth factor, beta 3##AK313564|TGFB3|7043|transforming growth factor, beta 3##X14149|TGFB3|7043|transforming growth factor, beta 3##J03241|TGFB3|7043|transforming growth factor, beta 3	0.99605	CTCF.p2:1:0.996
chr2	53650167	53650277	reg1016258.p1	8.526	+	EF539882 AK124726 NM_001135659 NM_004801	-2390618	-	TSC_hg19_v1_chr2_-_51259258 BC046631	-2390964	-	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	-3075300	-	BC019239 BC025376 NM_001008708 BC053896 BC017941 AK097260	344734	+	AK056069 NM_001201965 BC009569 AB209795 TSC_hg19_v1_chr2_-_54014091 AK000985 AK303133 AK001283 NM_016115 NM_145863	363856	-	NM_001127397 NM_001127398 NM_015701 TSC_hg19_v1_chr2_+_54014180 AY358717 AK001913 AY453410 BC013129 BC022228 AK315477 DQ894762	363985	+	EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1##BC046631|NRXN1|9378|neurexin 1##AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##BC019239|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC025376|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##NM_001008708|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC053896|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC017941|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##AK056069|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_001201965|ASB3|51130|ankyrin repeat and SOCS box containing 3##BC009569|ASB3|51130|ankyrin repeat and SOCS box containing 3##AB209795|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK000985|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK303133|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK001283|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_016115|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_145863|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_001127397|ERLEC1|27248|endoplasmic reticulum lectin 1##NM_001127398|ERLEC1|27248|endoplasmic reticulum lectin 1##NM_015701|ERLEC1|27248|endoplasmic reticulum lectin 1##AY358717|ERLEC1|27248|endoplasmic reticulum lectin 1##AK001913|ERLEC1|27248|endoplasmic reticulum lectin 1##AY453410|ERLEC1|27248|endoplasmic reticulum lectin 1##BC013129|ERLEC1|27248|endoplasmic reticulum lectin 1##BC022228|ERLEC1|27248|endoplasmic reticulum lectin 1##AK315477|ERLEC1|27248|endoplasmic reticulum lectin 1##DQ894762|ERLEC1|27248|endoplasmic reticulum lectin 1	0.859152	CTCF.p2:-8:0.859
chr3	111708073	111708185	reg1016838.p1	8.526	+	NM_018394 TSC_hg19_v1_chr3_+_111697885 AK300018 BC014516 AK093591 AK002204 AB528058 AM392560	-10262	+	AL832476 AK092996 AX747845 TSC_hg19_v1_chr3_+_111578690 AB209903	-129455	+	AL832205 TSC_hg19_v1_chr3_+_111578609	-129520	+	NM_001008272 NM_013259 AF303058 AF087855 AK315289 TSC_hg19_v1_chr3_+_111717781 BC015329	9578	+	NM_001008273 BC004477 TSC_hg19_v1_chr3_+_111718179 AF112201 BT007408 CU677265	10008	+	AK131211 NM_001042575 BC117322	50379	+	NM_018394|ABHD10|55347|abhydrolase domain containing 10##AK300018|ABHD10|55347|abhydrolase domain containing 10##BC014516|ABHD10|55347|abhydrolase domain containing 10##AK002204|ABHD10|55347|abhydrolase domain containing 10##AM392560|ABHD10|55347|abhydrolase domain containing 10##AL832476|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK092996|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AB209903|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AL832205|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001008272|TAGLN3|29114|transgelin 3##NM_013259|TAGLN3|29114|transgelin 3##AF303058|TAGLN3|29114|transgelin 3##AF087855|TAGLN3|29114|transgelin 3##AK315289|TAGLN3|29114|transgelin 3##BC015329|TAGLN3|29114|transgelin 3##NM_001008273|TAGLN3|29114|transgelin 3##AF112201|TAGLN3|29114|transgelin 3##BT007408|TAGLN3|29114|transgelin 3##AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7	0.179229	
chr5	128471428	128471544	reg1014570.p2	8.526	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-41061	+	TSC_hg19_v1_chr5_+_128301169 BX537383 NM_014031 NM_001017372 AK313456 AL833117	-170289	+	TSC_hg19_v1_chr5_+_128300789 BC041945	-170683	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	324567	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	769001	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	2029445	-	AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##BX537383|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_014031|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_001017372|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AK313456|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AL833117|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##BC041945|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1	1.310196	CTCF.p2:14:1.000	CTCF.p2:-42:0.311
chr5	64107003	64107109	reg1015025.p1	8.526	+	BX647971 TSC_hg19_v1_chr5_+_64064766 NM_005869 AK225161 AK225105 AK308223 AK312954 AY358569 AF039692 BC012117	-42272	+	TSC_hg19_v1_chr5_-_64064491 AK094073 AX748442 NM_173829	-42552	-	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	-42610	-	AY692424 NM_197941 AY692422	670668	-	TSC_hg19_v1_chr5_-_64858996 AF315941 BC005400 BC008504 NM_022145	751908	-	TSC_hg19_v1_chr5_+_64859122 AK025679 AK093675 AK300022 AK298175 AK301654 NM_015342 BC015385 AB384434 CU677289 GQ129262 GQ129263 D38552	752062	+	BX647971|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##NM_005869|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225161|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225105|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK308223|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK312954|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AY358569|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AF039692|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##BC012117|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK094073|SREK1IP1|285672|SREK1-interacting protein 1##NM_173829|SREK1IP1|285672|SREK1-interacting protein 1##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1##AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AF315941|CENPK|64105|centromere protein K##BC005400|CENPK|64105|centromere protein K##BC008504|CENPK|64105|centromere protein K##NM_022145|CENPK|64105|centromere protein K##AK025679|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK300022|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK298175|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK301654|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##NM_015342|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##BC015385|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129262|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129263|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##D38552|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1	0.917856	CTCF.p2:-3:0.918
chr7	31413109	31413206	reg1015738.p1	8.526	+	AK055238 AF248954 NM_022728	-32635	-	TSC_hg19_v1_chr7_+_31092073 NM_001118 NM_001199635 NM_001199636 NM_001199637 AK290046 AK226138	-321053	+	L01406 L09237 NM_000823 AY557192	-409498	+	AK128026 NM_194300	143820	+	NM_001145123 NM_006658	313473	+	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	697348	-	AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##NM_001118|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199635|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199636|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199637|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK290046|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK226138|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##L01406|GHRHR|2692|growth hormone releasing hormone receptor##L09237|GHRHR|2692|growth hormone releasing hormone receptor##NM_000823|GHRHR|2692|growth hormone releasing hormone receptor##AY557192|GHRHR|2692|growth hormone releasing hormone receptor##AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129##NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	0.0	
chr10	53975644	53975743	reg1013420.p2	8.525	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-516346	-	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-1141402	+	TSC_hg19_v1_chr10_+_52751129 D45864	-1224572	+	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	98422	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	555733	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2585305	-	AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##D45864|PRKG1|5592|protein kinase, cGMP-dependent, type I##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15	0.988529	CTCF.p2:8:0.989
chr6	74385340	74385447	reg1014692.p1	8.525	+	BC020961 AK075320 TSC_hg19_v1_chr6_-_74363692 AK315789 AK294068 NM_012434 AJ387747	-21613	-	DQ891462 EU176585 TSC_hg19_v1_chr6_-_74363649	-21763	-	BC012891 BC010735 BC071619 BC082268 BC071741 BC008587 BC018150 BC018641 BC019669 BC029997 BC038339 BC072385 BC014224 BC018850 BC009875 BC035877 BC111051 X03558 AK315827 TSC_hg19_v1_chr6_-_74230757 AK223030 AK024888 AK222551 AK223046 AK297878 AK300922 BC021686 BC070131 AK026650 AK055058 AK058051 AK058082 AK098510 AK098518 AK098623 AK127384 AK222515 AK222523 AK222982 AK289374 AK289442 AK290691 AK304214 BC028674 BC066893 BC066894 BC070500 D28375 NM_001402	-154647	-	TSC_hg19_v1_chr6_+_74405513 NM_001159587 NM_001159588 NM_133493	20172	+	TSC_hg19_v1_chr6_+_74405809 AF410459 AK313636	20403	+	TSC_hg19_v1_chr6_+_74405882 AK095888	20478	+	BC020961|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AK075320|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AK315789|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AK294068|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##NM_012434|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AJ387747|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##DQ891462|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##EU176585|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##BC012891|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC010735|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC071619|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC082268|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC071741|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC008587|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018150|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018641|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC019669|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC029997|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC038339|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC072385|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC014224|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018850|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC009875|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC035877|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC111051|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##X03558|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK315827|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK223030|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK024888|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222551|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK223046|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK297878|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK300922|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC021686|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC070131|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK026650|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK055058|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK058051|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK058082|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098510|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098518|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098623|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK127384|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222515|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222523|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222982|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK289374|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK289442|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK290691|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK304214|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC028674|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC066893|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC066894|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##NM_001402|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##NM_001159587|CD109|135228|CD109 molecule##NM_001159588|CD109|135228|CD109 molecule##NM_133493|CD109|135228|CD109 molecule##AF410459|CD109|135228|CD109 molecule##AK313636|CD109|135228|CD109 molecule##AK095888|CD109|135228|CD109 molecule	0.998207	CTCF.p2:-7:0.998
chr11	13205247	13205364	reg1015728.p3	8.524	+	TSC_hg19_v1_chr11_+_13030883 NM_001080521	-174381	+	TSC_hg19_v1_chr11_+_12960793 AK075236	-244494	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	-509342	+	TSC_hg19_v1_chr11_+_13299288 NM_001030272 NM_001030273 NM_001178	93987	+	TSC_hg19_v1_chr11_+_13299331 AK315174	94027	+	BC041129 TSC_hg19_v1_chr11_+_13299351 AK291510	94053	+	NM_001080521|RASSF10|644943|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_001030272|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001030273|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001178|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK315174|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##BC041129|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK291510|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like	0.0	
chr3	98332008	98332188	reg1015112.p3	8.524	+	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	-19679	-	AK313375 BC101779 BC101781 BC069437 CU686810 NM_005290	-81289	+	TSC_hg19_v1_chr3_-_98241835 NM_001040181 NM_001040182 NM_001040183 NM_001040199 NM_001040200 NM_019895	-90232	-	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	119147	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	119489	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	288394	-	AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AK313375|GPR15|2838|G protein-coupled receptor 15##BC101779|GPR15|2838|G protein-coupled receptor 15##BC101781|GPR15|2838|G protein-coupled receptor 15##BC069437|GPR15|2838|G protein-coupled receptor 15##NM_005290|GPR15|2838|G protein-coupled receptor 15##NM_001040181|CLDND1|56650|claudin domain containing 1##NM_001040182|CLDND1|56650|claudin domain containing 1##NM_001040183|CLDND1|56650|claudin domain containing 1##NM_001040199|CLDND1|56650|claudin domain containing 1##NM_001040200|CLDND1|56650|claudin domain containing 1##NM_019895|CLDND1|56650|claudin domain containing 1##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2	0.0	
chr2	75693952	75694095	reg1015803.p1	8.523	+	AK289765 NM_001058 NM_015727	-267395	-	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-508238	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-631772	-	BC016157 TSC_hg19_v1_chr2_-_75788066	94024	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	94067	-	AK023453 NM_032181	102824	-	AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A	0.99553	CTCF.p2:15:0.996
chr14	60816759	60816888	reg1015349.p1	8.522	+	TSC_hg19_v1_chr14_+_60716314 AY236965	-100505	+	TSC_hg19_v1_chr14_+_60715993 S87759 BC026691 AF070670 BC063243 AK308225	-100712	+	TSC_hg19_v1_chr14_+_60715965 NM_021003 NM_177951	-100865	+	BC125070 BC125071 AK098187 NM_174978 AL832219	135950	-	BC065831 NM_007374 BC087852 BC069413 AJ011785 EU446644	159203	+	BT007083 CU679159 TSC_hg19_v1_chr14_-_61116196 BC008874 NM_005982 X91868	299267	-	AY236965|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##S87759|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC026691|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AF070670|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC063243|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AK308225|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_021003|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_177951|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC125070|C14orf39|317761|chromosome 14 open reading frame 39##BC125071|C14orf39|317761|chromosome 14 open reading frame 39##AK098187|C14orf39|317761|chromosome 14 open reading frame 39##NM_174978|C14orf39|317761|chromosome 14 open reading frame 39##AL832219|C14orf39|317761|chromosome 14 open reading frame 39##BC065831|SIX6|4990|SIX homeobox 6##NM_007374|SIX6|4990|SIX homeobox 6##BC087852|SIX6|4990|SIX homeobox 6##BC069413|SIX6|4990|SIX homeobox 6##AJ011785|SIX6|4990|SIX homeobox 6##EU446644|SIX6|4990|SIX homeobox 6##BT007083|SIX1|6495|SIX homeobox 1##BC008874|SIX1|6495|SIX homeobox 1##NM_005982|SIX1|6495|SIX homeobox 1##X91868|SIX1|6495|SIX homeobox 1	0.999586	CTCF.p2:-3:1.000
chr1	911548	911650	reg1013950.p1	8.522	+	AL136730 NM_001160184 NM_032129 BC101386 BC101387 AB463180 AM393848 BC141658	-9707	+	TSC_hg19_v1_chr1_+_895963 AK127585 AY423763 NM_198317 BC105742	-15612	+	BC003555 TSC_hg19_v1_chr1_-_894655 NM_015658	-16935	-	AB048791 DQ895490 TSC_hg19_v1_chr1_-_935444	23799	-	BC012351 TSC_hg19_v1_chr1_-_935476 NM_001142467 NM_021170	23911	-	NM_005101 TSC_hg19_v1_chr1_+_948876 M13755 BC009507	37280	+	AL136730|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##NM_001160184|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##NM_032129|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC101386|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC101387|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##AM393848|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC141658|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##AK127585|KLHL17|339451|kelch-like 17 (Drosophila)##AY423763|KLHL17|339451|kelch-like 17 (Drosophila)##NM_198317|KLHL17|339451|kelch-like 17 (Drosophila)##BC105742|KLHL17|339451|kelch-like 17 (Drosophila)##BC003555|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##NM_015658|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AB048791|HES4|57801|hairy and enhancer of split 4 (Drosophila)##DQ895490|HES4|57801|hairy and enhancer of split 4 (Drosophila)##BC012351|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_001142467|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_021170|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_005101|ISG15|9636|ISG15 ubiquitin-like modifier##M13755|ISG15|9636|ISG15 ubiquitin-like modifier##BC009507|ISG15|9636|ISG15 ubiquitin-like modifier	0.29374	CTCF.p2:0:0.294
chr6	105525866	105526003	reg1016111.p2	8.522	+	AK131411 DQ127228 NM_001004317	-121012	+	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	-218146	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	-218172	-	BC034425 NM_147147	58286	-	NM_007073 AF204172 TSC_hg19_v1_chr6_-_105584689	58692	-	TSC_hg19_v1_chr6_-_105585033 AK289979 BC040502 NM_001199563	59113	-	AK131411|LIN28B|389421|lin-28 homolog B (C. elegans)##DQ127228|LIN28B|389421|lin-28 homolog B (C. elegans)##NM_001004317|LIN28B|389421|lin-28 homolog B (C. elegans)##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034425|BVES|11149|blood vessel epicardial substance##NM_147147|BVES|11149|blood vessel epicardial substance##NM_007073|BVES|11149|blood vessel epicardial substance##AF204172|BVES|11149|blood vessel epicardial substance##AK289979|BVES|11149|blood vessel epicardial substance##BC040502|BVES|11149|blood vessel epicardial substance##NM_001199563|BVES|11149|blood vessel epicardial substance	0.995054	CTCF.p2:11:0.995
chr7	141349820	141349945	reg1018502.p1	8.522	+	NM_018238 TSC_hg19_v1_chr7_+_141251215 AK304502 AK001704 AK299131 AK222769 AJ278150 BC009775	-98725	+	NM_001195278	-575851	+	NM_053035 TSC_hg19_v1_chr7_-_140714792	-635096	-	TSC_hg19_v1_chr7_-_141401967 AB032973 NM_001080392 AB384573	52052	-	AK131218 NM_001105558	58270	+	TSC_hg19_v1_chr7_+_141438200 BC008402 BC093054 AK294393 AF277319 M94556 NM_003143 AK311200 AK313033 BC000895	88382	+	NM_018238|AGK|55750|acylglycerol kinase##AK304502|AGK|55750|acylglycerol kinase##AK001704|AGK|55750|acylglycerol kinase##AK299131|AGK|55750|acylglycerol kinase##AK222769|AGK|55750|acylglycerol kinase##AJ278150|AGK|55750|acylglycerol kinase##BC009775|AGK|55750|acylglycerol kinase##NM_001195278|LOC100507421|100507421|transmembrane protein 178-like##NM_053035|MRPS33|51650|mitochondrial ribosomal protein S33##AB032973|KIAA1147|57189|KIAA1147##NM_001080392|KIAA1147|57189|KIAA1147##AK131218|WEE2|494551|WEE1 homolog 2 (S. pombe)##NM_001105558|WEE2|494551|WEE1 homolog 2 (S. pombe)##BC008402|SSBP1|6742|single-stranded DNA binding protein 1##BC093054|SSBP1|6742|single-stranded DNA binding protein 1##AK294393|SSBP1|6742|single-stranded DNA binding protein 1##AF277319|SSBP1|6742|single-stranded DNA binding protein 1##M94556|SSBP1|6742|single-stranded DNA binding protein 1##NM_003143|SSBP1|6742|single-stranded DNA binding protein 1##AK313033|SSBP1|6742|single-stranded DNA binding protein 1##BC000895|SSBP1|6742|single-stranded DNA binding protein 1	0.100822	
chrX	150882452	150882554	reg1016492.p1	8.522	+	NM_024082	-18774	+	NM_173493 AK097552 BC040301 AY270020	-150400	+	TSC_hg19_v1_chrX_+_150565705 BC103701 BC103702 BC105693 BC105694 AL833596 BC110800 AM392666 AB528749	-316768	+	BC022064 AF249872 NM_033085 AK057369 AB528542 AM393498 CU692478 DQ892418 DQ895632	2045	+	AK128186 NM_005140 BC126302 BC126304	20779	+	NM_001011548	198857	+	NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)##NM_173493|PASD1|139135|PAS domain containing 1##AK097552|PASD1|139135|PAS domain containing 1##BC040301|PASD1|139135|PAS domain containing 1##AY270020|PASD1|139135|PAS domain containing 1##BC103701|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC103702|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC105693|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC105694|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AL833596|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC110800|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AM392666|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC022064|FATE1|89885|fetal and adult testis expressed 1##AF249872|FATE1|89885|fetal and adult testis expressed 1##NM_033085|FATE1|89885|fetal and adult testis expressed 1##AM393498|FATE1|89885|fetal and adult testis expressed 1##DQ892418|FATE1|89885|fetal and adult testis expressed 1##DQ895632|FATE1|89885|fetal and adult testis expressed 1##AK128186|CNGA2|1260|cyclic nucleotide gated channel alpha 2##NM_005140|CNGA2|1260|cyclic nucleotide gated channel alpha 2##BC126302|CNGA2|1260|cyclic nucleotide gated channel alpha 2##BC126304|CNGA2|1260|cyclic nucleotide gated channel alpha 2##NM_001011548|MAGEA4|4103|melanoma antigen family A, 4	0.999561	CTCF.p2:0:1.000
chr11	69485138	69485250	reg1014688.p2	8.521	+	TSC_hg19_v1_chr11_+_69467221 AB075505	-17907	+	TSC_hg19_v1_chr11_+_69455981 AB385148 AM393193 AM393430 AM393593 DQ891848 DQ895038 CU692810 BT019844 BT019845 CR536538 CR542099	-29165	+	BC000076 BC001501 BC014078 TSC_hg19_v1_chr11_+_69455939 M73554 BC023620	-29244	+	EF639695 BC006448 BC019024 AK054816 AK125280 TSC_hg19_v1_chr11_-_69490092	4859	-	TSC_hg19_v1_chr11_-_69490116 BC065542 AK294004 AF503940 AK311918 NM_153451 AK026600	4944	-	AF110400 AY358302 NM_005117	33911	-	AB075505|CCND1|595|cyclin D1##AM393193|CCND1|595|cyclin D1##AM393430|CCND1|595|cyclin D1##AM393593|CCND1|595|cyclin D1##DQ891848|CCND1|595|cyclin D1##DQ895038|CCND1|595|cyclin D1##BT019844|CCND1|595|cyclin D1##BT019845|CCND1|595|cyclin D1##CR536538|CCND1|595|cyclin D1##CR542099|CCND1|595|cyclin D1##BC000076|CCND1|595|cyclin D1##BC001501|CCND1|595|cyclin D1##BC014078|CCND1|595|cyclin D1##M73554|CCND1|595|cyclin D1##BC023620|CCND1|595|cyclin D1##EF639695|ORAOV1|220064|oral cancer overexpressed 1##BC006448|ORAOV1|220064|oral cancer overexpressed 1##BC019024|ORAOV1|220064|oral cancer overexpressed 1##AK125280|ORAOV1|220064|oral cancer overexpressed 1##BC065542|ORAOV1|220064|oral cancer overexpressed 1##AK294004|ORAOV1|220064|oral cancer overexpressed 1##AF503940|ORAOV1|220064|oral cancer overexpressed 1##AK311918|ORAOV1|220064|oral cancer overexpressed 1##NM_153451|ORAOV1|220064|oral cancer overexpressed 1##AK026600|ORAOV1|220064|oral cancer overexpressed 1##AF110400|FGF19|9965|fibroblast growth factor 19##AY358302|FGF19|9965|fibroblast growth factor 19##NM_005117|FGF19|9965|fibroblast growth factor 19	0.999082	CTCF.p2:-12:0.999
chrX	40126372	40126502	reg1013937.p1	8.521	+	BC114220 NM_001123383 NM_001123384	-89856	-	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	-169745	-	TSC_hg19_v1_chrX_+_38663536 AK001248	-1462897	+	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	313749	+	AF291814 TSC_hg19_v1_chrX_+_40440231 AK293510 BC084541 AK297007 AF109363	313805	+	TSC_hg19_v1_chrX_+_40440264 AK314633 AK315948	313835	+	BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF291814|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK293510|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##BC084541|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK297007|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF109363|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK314633|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK315948|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.0	
chr11	130793328	130793429	reg1016752.p1	8.520	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-6990	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-7033	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-474716	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	447091	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	987246	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	987961	+	NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin	0.999915	CTCF.p2:2:1.000
chr1	225506796	225506931	reg1015944.p1	8.520	+	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	-389498	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-702684	+	AB209887 NM_001115113 NM_025160	-884863	-	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	108866	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	108938	-	NM_194442	109693	-	NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor##NM_194442|LBR|3930|lamin B receptor	0.976859	CTCF.p2:-2:0.977
chr12	51219273	51219389	reg1014898.p1	8.520	+	TSC_hg19_v1_chr12_+_51158275 AK299240	-61073	+	TSC_hg19_v1_chr12_+_51157883 NM_005171 AK313406 BC029619	-61453	+	TSC_hg19_v1_chr12_+_50898778 BC075027	-320432	+	NM_182559 BC035123 BC048112 CU690554	17392	+	TSC_hg19_v1_chr12_+_51318519 NM_014033	99193	+	TSC_hg19_v1_chr12_+_51318801 AY358797 AK024409 AK307071 AK225689 AK225595 AK023693 AK293356 AJ536233 BC008180 BC004492 AB590800 EU832657 EU832734 AL050159 AF113007	99470	+	AK299240|ATF1|466|activating transcription factor 1##NM_005171|ATF1|466|activating transcription factor 1##AK313406|ATF1|466|activating transcription factor 1##BC029619|ATF1|466|activating transcription factor 1##BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##NM_182559|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC035123|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC048112|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##NM_014033|METTL7A|25840|methyltransferase like 7A##AY358797|METTL7A|25840|methyltransferase like 7A##AK024409|METTL7A|25840|methyltransferase like 7A##AK307071|METTL7A|25840|methyltransferase like 7A##AK225689|METTL7A|25840|methyltransferase like 7A##AK225595|METTL7A|25840|methyltransferase like 7A##AK023693|METTL7A|25840|methyltransferase like 7A##AK293356|METTL7A|25840|methyltransferase like 7A##AJ536233|METTL7A|25840|methyltransferase like 7A##BC008180|METTL7A|25840|methyltransferase like 7A##BC004492|METTL7A|25840|methyltransferase like 7A##EU832657|METTL7A|25840|methyltransferase like 7A##EU832734|METTL7A|25840|methyltransferase like 7A##AL050159|METTL7A|25840|methyltransferase like 7A##AF113007|METTL7A|25840|methyltransferase like 7A	0.995914	CTCF.p2:0:0.996
chr16	86551429	86551518	reg1012756.p2	8.520	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	-7233	+	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	-7317	+	TSC_hg19_v1_chr16_-_86542463 AK091834	-9009	-	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	37299	-	BC113437 BC113439 NM_005251	49383	+	BC100027 NM_005250	60641	+	EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1	0.657506	CTCF.p2:-1:0.646
chrX	149756205	149756319	reg1017434.p1	8.520	+	AL832715 AK297021 BC030779 TSC_hg19_v1_chrX_+_149737092	-19158	+	TSC_hg19_v1_chrX_+_149737070 NM_000252 AK291710 U46024 AK297057 AK304036	-19216	+	NM_001177466 NM_005491 U46023 BC136324 AB527434 AK315217	-142480	+	TSC_hg19_v1_chrX_+_149861868 BC032947 NM_003828 AK226109 AF057354 AJ224979	105659	+	AM393605 AM393786 DQ891322 DQ894506 AK290200 TSC_hg19_v1_chrX_-_150067096 AK293244 AY078165 AY078166 AY078167 AK125020 AK291375 BC025729 AK295217	310831	-	TSC_hg19_v1_chrX_-_150067149 BC030536 AY358837 AL136580 NM_001184808 NM_001242614 NM_031462 NM_134445 NM_134446	310945	-	AL832715|MTM1|4534|myotubularin 1##AK297021|MTM1|4534|myotubularin 1##BC030779|MTM1|4534|myotubularin 1##NM_000252|MTM1|4534|myotubularin 1##AK291710|MTM1|4534|myotubularin 1##U46024|MTM1|4534|myotubularin 1##AK297057|MTM1|4534|myotubularin 1##AK304036|MTM1|4534|myotubularin 1##NM_001177466|MAMLD1|10046|mastermind-like domain containing 1##NM_005491|MAMLD1|10046|mastermind-like domain containing 1##U46023|MAMLD1|10046|mastermind-like domain containing 1##BC136324|MAMLD1|10046|mastermind-like domain containing 1##AK315217|MAMLD1|10046|mastermind-like domain containing 1##BC032947|MTMR1|8776|myotubularin related protein 1##NM_003828|MTMR1|8776|myotubularin related protein 1##AK226109|MTMR1|8776|myotubularin related protein 1##AF057354|MTMR1|8776|myotubularin related protein 1##AJ224979|MTMR1|8776|myotubularin related protein 1##AM393605|CD99L2|83692|CD99 molecule-like 2##AM393786|CD99L2|83692|CD99 molecule-like 2##DQ891322|CD99L2|83692|CD99 molecule-like 2##DQ894506|CD99L2|83692|CD99 molecule-like 2##AK290200|CD99L2|83692|CD99 molecule-like 2##AK293244|CD99L2|83692|CD99 molecule-like 2##AY078165|CD99L2|83692|CD99 molecule-like 2##AY078166|CD99L2|83692|CD99 molecule-like 2##AY078167|CD99L2|83692|CD99 molecule-like 2##AK125020|CD99L2|83692|CD99 molecule-like 2##AK291375|CD99L2|83692|CD99 molecule-like 2##BC025729|CD99L2|83692|CD99 molecule-like 2##AK295217|CD99L2|83692|CD99 molecule-like 2##BC030536|CD99L2|83692|CD99 molecule-like 2##AY358837|CD99L2|83692|CD99 molecule-like 2##AL136580|CD99L2|83692|CD99 molecule-like 2##NM_001184808|CD99L2|83692|CD99 molecule-like 2##NM_001242614|CD99L2|83692|CD99 molecule-like 2##NM_031462|CD99L2|83692|CD99 molecule-like 2##NM_134445|CD99L2|83692|CD99 molecule-like 2##NM_134446|CD99L2|83692|CD99 molecule-like 2	0.383183	CTCF.p2:1:0.383
chr11	6319947	6320071	reg1016587.p3	8.519	+	NM_176875 D13305 S70057 L07746 AK292064 AK226020 BC000740 AK314266 AB527993 AF239668 Y13464 DQ890577 DQ893737 AF441129 AY029770 AY322551 BT006789 L04473 L08112	-38979	+	NM_001037329 AK122736	-59684	+	TSC_hg19_v1_chr11_-_6255892 AK056468 NM_001098794 NM_032127	-64088	-	DQ892300 DQ895499 BC038387 TSC_hg19_v1_chr11_-_6341732 BC011585 NM_145040 AF339881	21724	-	TSC_hg19_v1_chr11_+_6411681 NM_000543 NM_001007593 AB209775 AK292388 X59960 BC041164 M59916 AY649987 HQ132745 HQ132746 HQ132747 HQ132748	91723	+	TSC_hg19_v1_chr11_-_6440299 AK293452 AF394214 L77864 NM_001164 AK293613 AK294495 AK311725	120314	-	NM_176875|CCKBR|887|cholecystokinin B receptor##D13305|CCKBR|887|cholecystokinin B receptor##S70057|CCKBR|887|cholecystokinin B receptor##L07746|CCKBR|887|cholecystokinin B receptor##AK292064|CCKBR|887|cholecystokinin B receptor##AK226020|CCKBR|887|cholecystokinin B receptor##BC000740|CCKBR|887|cholecystokinin B receptor##AK314266|CCKBR|887|cholecystokinin B receptor##AF239668|CCKBR|887|cholecystokinin B receptor##DQ890577|CCKBR|887|cholecystokinin B receptor##DQ893737|CCKBR|887|cholecystokinin B receptor##AF441129|CCKBR|887|cholecystokinin B receptor##AY029770|CCKBR|887|cholecystokinin B receptor##AY322551|CCKBR|887|cholecystokinin B receptor##BT006789|CCKBR|887|cholecystokinin B receptor##L04473|CCKBR|887|cholecystokinin B receptor##L08112|CCKBR|887|cholecystokinin B receptor##NM_001037329|CNGA4|1262|cyclic nucleotide gated channel alpha 4##AK122736|CNGA4|1262|cyclic nucleotide gated channel alpha 4##AK056468|FAM160A2|84067|family with sequence similarity 160, member A2##NM_001098794|FAM160A2|84067|family with sequence similarity 160, member A2##NM_032127|FAM160A2|84067|family with sequence similarity 160, member A2##DQ892300|PRKCDBP|112464|protein kinase C, delta binding protein##DQ895499|PRKCDBP|112464|protein kinase C, delta binding protein##BC038387|PRKCDBP|112464|protein kinase C, delta binding protein##BC011585|PRKCDBP|112464|protein kinase C, delta binding protein##NM_145040|PRKCDBP|112464|protein kinase C, delta binding protein##AF339881|PRKCDBP|112464|protein kinase C, delta binding protein##NM_000543|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##NM_001007593|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AB209775|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK292388|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##X59960|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##BC041164|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##M59916|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AY649987|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132745|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132746|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132747|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132748|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK293452|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AF394214|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##L77864|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_001164|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK293613|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK294495|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK311725|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)	0.619024	CTCF.p2:-28:0.619
chr14	65453432	65453574	reg1015385.p1	8.519	+	CU691918 BC040679 AB672631 AB672632 AB678453 AB678452 NM_198686 TSC_hg19_v1_chr14_-_65439010	-14480	-	BC022820 TSC_hg19_v1_chr14_-_65409460 AK225871 BC005277 BC067221 BC016756 X68314 X53463 BC039850 BC046164 NM_002083	-43988	-	TSC_hg19_v1_chr14_+_65381184 AK296141 AK303739 AK296850	-72309	+	AK315714 NM_002028 TSC_hg19_v1_chr14_+_65453591	16	+	TSC_hg19_v1_chr14_+_65453605 BC013574 AK225917 L00635 BC020232 BX248269 DQ892128 DQ895321	134	+	BC035148 BC052775 TSC_hg19_v1_chr14_+_65453967	463	+	BC040679|RAB15|376267|RAB15, member RAS onocogene family##AB678452|RAB15|376267|RAB15, member RAS onocogene family##NM_198686|RAB15|376267|RAB15, member RAS onocogene family##BC022820|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##AK225871|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC005277|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC067221|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC016756|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##X68314|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##X53463|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC039850|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##BC046164|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##NM_002083|GPX2|2877|glutathione peroxidase 2 (gastrointestinal)##AK296141|CHURC1|91612|churchill domain containing 1##AK303739|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##AK296850|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##AK315714|FNTB|2342|farnesyltransferase, CAAX box, beta##NM_002028|FNTB|2342|farnesyltransferase, CAAX box, beta##BC013574|FNTB|2342|farnesyltransferase, CAAX box, beta##AK225917|FNTB|2342|farnesyltransferase, CAAX box, beta##L00635|FNTB|2342|farnesyltransferase, CAAX box, beta##BC020232|FNTB|2342|farnesyltransferase, CAAX box, beta##BX248269|FNTB|2342|farnesyltransferase, CAAX box, beta##DQ892128|FNTB|2342|farnesyltransferase, CAAX box, beta##DQ895321|FNTB|2342|farnesyltransferase, CAAX box, beta	0.261466	CTCF.p2:-8:0.261
chr6	64990617	64990708	reg1015423.p1	8.519	+	AF091622 BC113650 BC113652 NM_015153 D87685 AB385299	-634220	+	TSC_hg19_v1_chr6_+_64346027 BX648268 AK290491	-644645	+	TSC_hg19_v1_chr6_+_64345729 AK315868 AK298580	-644839	+	AY358133 NM_198283 AK310478	1299043	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	1426431	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	3608366	-	AF091622|PHF3|23469|PHD finger protein 3##BC113650|PHF3|23469|PHD finger protein 3##BC113652|PHF3|23469|PHD finger protein 3##NM_015153|PHF3|23469|PHD finger protein 3##D87685|PHF3|23469|PHD finger protein 3##BX648268|PHF3|23469|PHD finger protein 3##AK290491|PHF3|23469|PHD finger protein 3##AK315868|PHF3|23469|PHD finger protein 3##AK298580|PHF3|23469|PHD finger protein 3##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3	0.614409	CTCF.p2:-1:0.614
chr7	37940987	37941119	reg1017462.p1	8.519	+	BC036816 NM_016616	-52855	+	AB529245 AY288420 BC120951 BC120952 NM_181791	-161058	+	BC043356 TSC_hg19_v1_chr7_+_37723380	-217671	+	AF026692 BC047684 BC058911 AK313029 TSC_hg19_v1_chr7_-_37956420 AK303977 AK302357	15358	-	TSC_hg19_v1_chr7_-_37956526 BC032828 NM_003014	15467	-	AY027862 NM_001242946 NM_017549 TSC_hg19_v1_chr7_+_37960259 BC018299	19170	+	BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##AY288420|GPR141|353345|G protein-coupled receptor 141##BC120951|GPR141|353345|G protein-coupled receptor 141##BC120952|GPR141|353345|G protein-coupled receptor 141##NM_181791|GPR141|353345|G protein-coupled receptor 141##AF026692|SFRP4|6424|secreted frizzled-related protein 4##BC047684|SFRP4|6424|secreted frizzled-related protein 4##BC058911|SFRP4|6424|secreted frizzled-related protein 4##AK313029|SFRP4|6424|secreted frizzled-related protein 4##AK303977|SFRP4|6424|secreted frizzled-related protein 4##AK302357|SFRP4|6424|secreted frizzled-related protein 4##BC032828|SFRP4|6424|secreted frizzled-related protein 4##NM_003014|SFRP4|6424|secreted frizzled-related protein 4##AY027862|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_001242946|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_017549|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC018299|EPDR1|54749|ependymin related protein 1 (zebrafish)	0.976537	CTCF.p2:-16:0.977
chr10	52321638	52321773	reg1014916.p1	8.518	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-313365	-	NM_018232	-483820	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-493983	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	61998	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	178005	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	323688	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.0	
chr10	104163688	104163789	reg1016488.p2	8.517	+	NM_002502 X61498 X61499 TSC_hg19_v1_chr10_+_104155501 AK292654	-8267	+	NM_001077493 TSC_hg19_v1_chr10_+_104154290 BC002844 NM_001077494 S76638	-9448	+	TSC_hg19_v1_chr10_+_104005308 AF068755 D87435 BC117681 BC117682	-158371	+	TSC_hg19_v1_chr10_-_104178575 BC037332	14834	-	AB095931 NM_002779 TSC_hg19_v1_chr10_-_104178917	15170	-	BC039259 TSC_hg19_v1_chr10_-_104179472 AF452641	15733	-	NM_002502|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61498|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61499|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##AK292654|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_001077493|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC002844|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_001077494|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##S76638|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC037332|PSD|5662|pleckstrin and Sec7 domain containing##AB095931|PSD|5662|pleckstrin and Sec7 domain containing##NM_002779|PSD|5662|pleckstrin and Sec7 domain containing##BC039259|PSD|5662|pleckstrin and Sec7 domain containing##AF452641|PSD|5662|pleckstrin and Sec7 domain containing	0.098715	
chr14	65879140	65879303	reg1014882.p1	8.517	+	TSC_hg19_v1_chr14_+_65878582 BC142958 AK292413 AK294242 Y17976 Y17977	-601	+	AJ536056 NM_004480 NM_178155 NM_178156	-1912	+	TSC_hg19_v1_chr14_-_65569238 BC013669 NM_002382 NM_145112 NM_145113 NM_145114 NM_145116 NM_197957 AK290929 AL833643	-309983	-	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	105	-	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	267	+	TSC_hg19_v1_chr14_+_65879739 BC025385	504	+	BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AJ536056|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_004480|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178155|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178156|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC013669|MAX|4149|MYC associated factor X##NM_002382|MAX|4149|MYC associated factor X##NM_145112|MAX|4149|MYC associated factor X##NM_145113|MAX|4149|MYC associated factor X##NM_145114|MAX|4149|MYC associated factor X##NM_145116|MAX|4149|MYC associated factor X##NM_197957|MAX|4149|MYC associated factor X##AK290929|MAX|4149|MYC associated factor X##AL833643|MAX|4149|MYC associated factor X##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)	0.162468	
chr4	24490441	24490548	reg1015462.p1	8.517	+	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	-598841	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	-1795902	+	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	-1972940	-	AF279891 TSC_hg19_v1_chr4_-_24586127	95582	-	TSC_hg19_v1_chr4_-_24586154 AK303506 BC035974	95666	-	AB001636 TSC_hg19_v1_chr4_-_24586176	95682	-	AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.953606	CTCF.p2:0:0.954
chr8	143716127	143716268	reg1013917.p1	8.517	+	AF193421 D87468 BC075802 BC012321 NM_015193 TSC_hg19_v1_chr8_-_143695839	-20371	-	AB005297 NM_001702	-170821	+	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	-231660	-	TSC_hg19_v1_chr8_-_143751386 BC071862	35157	-	TSC_hg19_v1_chr8_-_143751397 AK127631 NM_001077527 NM_003724 BX640755	35204	-	NM_005672 AJ297436 AF043498 BC023582 BC048808 BC065183 CU692804 AY358912	45709	+	AF193421|ARC|23237|activity-regulated cytoskeleton-associated protein##D87468|ARC|23237|activity-regulated cytoskeleton-associated protein##BC075802|ARC|23237|activity-regulated cytoskeleton-associated protein##BC012321|ARC|23237|activity-regulated cytoskeleton-associated protein##NM_015193|ARC|23237|activity-regulated cytoskeleton-associated protein##AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##BC071862|JRK|8629|jerky homolog (mouse)##AK127631|JRK|8629|jerky homolog (mouse)##NM_001077527|JRK|8629|jerky homolog (mouse)##NM_003724|JRK|8629|jerky homolog (mouse)##BX640755|JRK|8629|jerky homolog (mouse)##NM_005672|PSCA|8000|prostate stem cell antigen##AJ297436|PSCA|8000|prostate stem cell antigen##AF043498|PSCA|8000|prostate stem cell antigen##BC023582|PSCA|8000|prostate stem cell antigen##BC048808|PSCA|8000|prostate stem cell antigen##BC065183|PSCA|8000|prostate stem cell antigen##AY358912|PSCA|8000|prostate stem cell antigen	0.998545	CTCF.p2:11:0.999
chr10	72663200	72663323	reg1017764.p1	8.516	+	NM_000281	-14721	-	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	-14959	-	TSC_hg19_v1_chr10_+_72575751 AB033078 AJ011304	-87506	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	309119	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	415764	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	415785	+	NM_000281|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AB033078|SGPL1|8879|sphingosine-1-phosphate lyase 1##AJ011304|SGPL1|8879|sphingosine-1-phosphate lyase 1##AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3	0.975502	CTCF.p2:-12:0.976
chr2	9013115	9013205	reg1012718.p1	8.516	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	-35441	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-190957	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1955573	+	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	130661	-	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	333732	+	TSC_hg19_v1_chr2_+_9346940 BC063308	333799	+	BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##BC063308|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	0.87121	CTCF.p2:-3:0.871
chrX	52963982	52964162	reg1015689.p2	8.516	+	AL834135 NM_001099684	-35664	+	TSC_hg19_v1_chrX_+_52926366 AK091598 AX747084	-37681	+	TSC_hg19_v1_chrX_+_52926355 AK057692 BX649013	-37728	+	AL834135 NM_001099684	21556	-	AK091598 AX747084 BX649013 CR749619 TSC_hg19_v1_chrX_-_52987693 AK057692 NM_001242491	23590	-	BC067819 NM_001242489 NM_001242490 NM_001242492 NM_001242493 NM_001242494 NM_001242495 NM_001242496 NM_001242497 NM_014138	60574	-	AL834135|FAM156A|29057|family with sequence similarity 156, member A##NM_001099684|FAM156B|727866|family with sequence similarity 156, member B##AK091598|FAM156B|727866|family with sequence similarity 156, member B##AK057692|FAM156A|29057|family with sequence similarity 156, member A##BX649013|FAM156B|727866|family with sequence similarity 156, member B##AL834135|FAM156A|29057|family with sequence similarity 156, member A##NM_001099684|FAM156B|727866|family with sequence similarity 156, member B##AK091598|FAM156B|727866|family with sequence similarity 156, member B##BX649013|FAM156B|727866|family with sequence similarity 156, member B##CR749619|FAM156A|29057|family with sequence similarity 156, member A##AK057692|FAM156A|29057|family with sequence similarity 156, member A##NM_001242491|FAM156A|29057|family with sequence similarity 156, member A##BC067819|FAM156A|29057|family with sequence similarity 156, member A##NM_001242489|FAM156A|29057|family with sequence similarity 156, member A##NM_001242490|FAM156A|29057|family with sequence similarity 156, member A##NM_001242492|FAM156A|29057|family with sequence similarity 156, member A##NM_001242493|FAM156A|29057|family with sequence similarity 156, member A##NM_001242494|FAM156A|29057|family with sequence similarity 156, member A##NM_001242495|FAM156A|29057|family with sequence similarity 156, member A##NM_001242496|FAM156A|29057|family with sequence similarity 156, member A##NM_001242497|FAM156A|29057|family with sequence similarity 156, member A##NM_014138|FAM156A|29057|family with sequence similarity 156, member A	0.996873	CTCF.p2:19:0.997
chr10	26895425	26895557	reg1016359.p1	8.515	+	TSC_hg19_v1_chr10_+_26727703 AY152730	-167785	+	TSC_hg19_v1_chr10_+_26727679 BC054516	-167823	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	-168174	+	AK096048 TSC_hg19_v1_chr10_-_26986612	91093	-	TSC_hg19_v1_chr10_+_26986597 AK024802 AK223414 AB210838 NM_014317 BC063635 BC049211 AF118395	91155	+	TSC_hg19_v1_chr10_-_27057776 AK315914	162326	-	AY152730|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK024802|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK223414|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AB210838|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##NM_014317|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC063635|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC049211|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AF118395|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK315914|ABI1|10006|abl-interactor 1	0.987869	CTCF.p2:4:0.988
chr12	133137881	133138004	reg1014762.p1	8.515	+	NM_001142641	-70786	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-232085	-	AF458594 NM_021808	-447370	-	NM_001195520	49094	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	57462	+	BC021559 TSC_hg19_v1_chr12_-_133215909	77900	-	NM_001142641|FBRSL1|57666|fibrosin-like 1##BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC021559|POLE|5426|polymerase (DNA directed), epsilon	0.998225	CTCF.p2:0:0.998
chr1	225110357	225110497	reg1015949.p2	8.515	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-306248	+	AB209887 NM_001115113 NM_025160	-488427	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-488667	-	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	6938	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	505302	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	505374	-	AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor	0.991541	CTCF.p2:17:0.992
chrX	47171920	47172047	reg1017300.p1	8.515	+	TSC_hg19_v1_chrX_+_47092422 AK055588 AK098394 BC073960 BC063668 AB073597 BC000350 AB385092 U44839 AK294635	-79518	+	BC140849 NM_004651 TSC_hg19_v1_chrX_+_47092361	-79671	+	AK301832 NM_001170460	-89567	+	U28687 NM_003446 BC075003 AB528013 EU446919	58040	+	BC015023 NM_007130 NM_153380	170361	-	NM_001654 X04790 TSC_hg19_v1_chrX_+_47420605 AB208831 AK300975 AK130043 AK297453 AK307747 BC002466 BC007514	248584	+	AK055588|USP11|8237|ubiquitin specific peptidase 11##AK098394|USP11|8237|ubiquitin specific peptidase 11##BC073960|USP11|8237|ubiquitin specific peptidase 11##BC063668|USP11|8237|ubiquitin specific peptidase 11##AB073597|USP11|8237|ubiquitin specific peptidase 11##BC000350|USP11|8237|ubiquitin specific peptidase 11##U44839|USP11|8237|ubiquitin specific peptidase 11##AK294635|USP11|8237|ubiquitin specific peptidase 11##BC140849|USP11|8237|ubiquitin specific peptidase 11##NM_004651|USP11|8237|ubiquitin specific peptidase 11##AK301832|CDK16|5127|cyclin-dependent kinase 16##NM_001170460|CDK16|5127|cyclin-dependent kinase 16##U28687|ZNF157|7712|zinc finger protein 157##NM_003446|ZNF157|7712|zinc finger protein 157##BC075003|ZNF157|7712|zinc finger protein 157##EU446919|ZNF157|7712|zinc finger protein 157##BC015023|ZNF41|7592|zinc finger protein 41##NM_007130|ZNF41|7592|zinc finger protein 41##NM_153380|ZNF41|7592|zinc finger protein 41##NM_001654|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##X04790|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AB208831|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK300975|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK130043|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK297453|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK307747|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC002466|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC007514|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog	0.62845	CTCF.p2:4:0.628
chr20	16499080	16499211	reg1015498.p1	8.514	+	BC018687 NM_001033087	-1321642	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-2180889	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-2522809	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	54868	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	211518	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	229876	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	0.997923	CTCF.p2:-12:0.998
chr22	19167018	19167173	reg1016797.p1	8.514	+	TSC_hg19_v1_chr22_-_19166299 NM_005984	-792	-	TSC_hg19_v1_chr22_-_19166279 AK292313 L75823	-815	-	BC018590 TSC_hg19_v1_chr22_-_19166250 BC004980 BC008061 L77567 U25147	-899	-	BC143977 BC143979 TSC_hg19_v1_chr22_-_19279243 X95486 AK302506 U60802 U60803 NM_001835 NM_007098	112121	-	AB384712 CU013101 CU013389 CR456503 X81844 TSC_hg19_v1_chr22_-_19419085	251955	-	TSC_hg19_v1_chr22_-_19419214 BC039835	252100	-	NM_005984|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1##AK292313|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1##L75823|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1##BC018590|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1##BC004980|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1##BC008061|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1##L77567|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1##U25147|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1##BC143977|CLTCL1|8218|clathrin, heavy chain-like 1##BC143979|CLTCL1|8218|clathrin, heavy chain-like 1##X95486|CLTCL1|8218|clathrin, heavy chain-like 1##AK302506|CLTCL1|8218|clathrin, heavy chain-like 1##U60802|CLTCL1|8218|clathrin, heavy chain-like 1##U60803|CLTCL1|8218|clathrin, heavy chain-like 1##NM_001835|CLTCL1|8218|clathrin, heavy chain-like 1##NM_007098|CLTCL1|8218|clathrin, heavy chain-like 1##CU013101|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##CU013389|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##CR456503|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##X81844|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##BC039835|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	0.735309	CTCF.p2:5:0.735
chr2	65260502	65260618	reg1017329.p1	8.514	+	TSC_hg19_v1_chr2_+_65216532 AK223486 AK313052 BC072423 BC026216 L14595 L19444 AB026689 DQ891127 DQ894306	-43910	+	TSC_hg19_v1_chr2_+_65216485 AK298472 AK315986 NM_003038	-44069	+	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	-44960	+	TSC_hg19_v1_chr2_+_65283579 AB011154 NM_015147 AK093846 AK000856 AK299373 AK304110 AK301173 AK098786 BX648774 BC030534 BC002982 BC004873	23000	+	AF498929 BT019528 BT019529 CR533479 CR536488 AB464118 AB590355 AM392684 CU674450 DQ894084 EU831590 EU831675 TSC_hg19_v1_chr2_-_65357083 M28209	96515	-	TSC_hg19_v1_chr2_-_65357236 BC000905 BX571747 AL050268 AK303678 AK055927 AK315495	96659	-	AK223486|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK313052|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC072423|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC026216|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L14595|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L19444|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AB026689|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ891127|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ894306|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AB011154|CEP68|23177|centrosomal protein 68kDa##NM_015147|CEP68|23177|centrosomal protein 68kDa##AK093846|CEP68|23177|centrosomal protein 68kDa##AK000856|CEP68|23177|centrosomal protein 68kDa##AK299373|CEP68|23177|centrosomal protein 68kDa##AK304110|CEP68|23177|centrosomal protein 68kDa##AK301173|CEP68|23177|centrosomal protein 68kDa##AK098786|CEP68|23177|centrosomal protein 68kDa##BX648774|CEP68|23177|centrosomal protein 68kDa##BC030534|CEP68|23177|centrosomal protein 68kDa##BC002982|CEP68|23177|centrosomal protein 68kDa##BC004873|CEP68|23177|centrosomal protein 68kDa##AF498929|RAB1A|5861|RAB1A, member RAS oncogene family##BT019528|RAB1A|5861|RAB1A, member RAS oncogene family##BT019529|RAB1A|5861|RAB1A, member RAS oncogene family##CR533479|RAB1A|5861|RAB1A, member RAS oncogene family##CR536488|RAB1A|5861|RAB1A, member RAS oncogene family##AM392684|RAB1A|5861|RAB1A, member RAS oncogene family##DQ894084|RAB1A|5861|RAB1A, member RAS oncogene family##EU831590|RAB1A|5861|RAB1A, member RAS oncogene family##EU831675|RAB1A|5861|RAB1A, member RAS oncogene family##M28209|RAB1A|5861|RAB1A, member RAS oncogene family##BC000905|RAB1A|5861|RAB1A, member RAS oncogene family##BX571747|RAB1A|5861|RAB1A, member RAS oncogene family##AL050268|RAB1A|5861|RAB1A, member RAS oncogene family##AK303678|RAB1A|5861|RAB1A, member RAS oncogene family##AK055927|RAB1A|5861|RAB1A, member RAS oncogene family##AK315495|RAB1A|5861|RAB1A, member RAS oncogene family	0.094361	
chrX	8783589	8783715	reg1016000.p1	8.514	+	BC113449 BC143805 NM_001171186 BC112022 AF494343 NM_174951	-14252	-	TSC_hg19_v1_chrX_-_8700193 BC137426 BC137427 M97252 NM_000216 S60085	-83445	-	X60299 TSC_hg19_v1_chrX_-_8700155	-83509	-	BC120955 BC120956 NM_205849	217450	-	TSC_hg19_v1_chrX_+_9431357 AK289409 NM_001139466 NM_001139467 NM_001139468 AK290962 BC032708	647695	+	TSC_hg19_v1_chrX_+_9433108 Y12781 BC052304 NM_005647	649582	+	BC113449|FAM9A|171482|family with sequence similarity 9, member A##BC143805|FAM9A|171482|family with sequence similarity 9, member A##NM_001171186|FAM9A|171482|family with sequence similarity 9, member A##BC112022|FAM9A|171482|family with sequence similarity 9, member A##AF494343|FAM9A|171482|family with sequence similarity 9, member A##NM_174951|FAM9A|171482|family with sequence similarity 9, member A##BC137426|KAL1|3730|Kallmann syndrome 1 sequence##BC137427|KAL1|3730|Kallmann syndrome 1 sequence##M97252|KAL1|3730|Kallmann syndrome 1 sequence##NM_000216|KAL1|3730|Kallmann syndrome 1 sequence##S60085|KAL1|3730|Kallmann syndrome 1 sequence##X60299|KAL1|3730|Kallmann syndrome 1 sequence##BC120955|FAM9B|171483|family with sequence similarity 9, member B##BC120956|FAM9B|171483|family with sequence similarity 9, member B##NM_205849|FAM9B|171483|family with sequence similarity 9, member B##AK289409|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139466|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139467|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139468|TBL1X|6907|transducin (beta)-like 1X-linked##AK290962|TBL1X|6907|transducin (beta)-like 1X-linked##BC032708|TBL1X|6907|transducin (beta)-like 1X-linked##Y12781|TBL1X|6907|transducin (beta)-like 1X-linked##BC052304|TBL1X|6907|transducin (beta)-like 1X-linked##NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked	0.979586	CTCF.p2:20:0.980
chr11	10437740	10437848	reg1021526.p2	8.513	+	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	-111165	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	-122028	-	AK098060 TSC_hg19_v1_chr11_+_9779882	-657932	+	AK295046 NM_001172431	34073	+	NM_000480 BC126118 TSC_hg19_v1_chr11_+_10472246 AK311436 M84720 AK289998 AK294444 AK313039 HQ258646	34601	+	NM_001025389 D12775 AK308181 M84721 AK299113 TSC_hg19_v1_chr11_+_10476953	39025	+	AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK098060|LOC283104|283104|uncharacterized LOC283104##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3##NM_000480|AMPD3|272|adenosine monophosphate deaminase 3##BC126118|AMPD3|272|adenosine monophosphate deaminase 3##AK311436|AMPD3|272|adenosine monophosphate deaminase 3##M84720|AMPD3|272|adenosine monophosphate deaminase 3##AK289998|AMPD3|272|adenosine monophosphate deaminase 3##AK294444|AMPD3|272|adenosine monophosphate deaminase 3##AK313039|AMPD3|272|adenosine monophosphate deaminase 3##HQ258646|AMPD3|272|adenosine monophosphate deaminase 3##NM_001025389|AMPD3|272|adenosine monophosphate deaminase 3##D12775|AMPD3|272|adenosine monophosphate deaminase 3##AK308181|AMPD3|272|adenosine monophosphate deaminase 3##M84721|AMPD3|272|adenosine monophosphate deaminase 3##AK299113|AMPD3|272|adenosine monophosphate deaminase 3	0.0	
chr11	30164789	30164893	reg1014153.p1	8.513	+	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	-126310	-	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-2032988	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-2034963	+	NM_000510 NM_001018080	87721	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	179811	+	CU689190 NM_001584 U57911	437138	-	M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46##NM_001584|MPPED2|744|metallophosphoesterase domain containing 2##U57911|MPPED2|744|metallophosphoesterase domain containing 2	0.998888	CTCF.p2:5:0.999
chr15	44876507	44876607	reg1015562.p1	8.512	+	TSC_hg19_v1_chr15_+_44829374 AK300659	-47175	+	BC002719 U97670 TSC_hg19_v1_chr15_+_44829352 AK002006	-47215	+	TSC_hg19_v1_chr15_+_44829313 AK023388	-47245	+	TSC_hg19_v1_chr15_-_44955849 AB385508 AB470308 AB470309 AB470310 AB058743 BC153879 BC047416	79287	-	TSC_hg19_v1_chr15_-_44955887 BC150640 NM_001160227 NM_025137	79323	-	BC036924 NM_001145112	92528	-	AK300659|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##BC002719|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##U97670|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##AK002006|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##AK023388|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC150640|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_001160227|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_025137|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC036924|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##NM_001145112|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)	0.925971	CTCF.p2:0:0.926
chr20	3544364	3544468	reg1015387.p2	8.512	+	TSC_hg19_v1_chr20_+_3451737 AF106861	-92676	+	TSC_hg19_v1_chr20_+_3451685 AK293010 NM_001207047 NM_139321 NM_139322 AK302730 BC101705	-92747	+	AK310540 TSC_hg19_v1_chr20_-_3388594	-155823	-	AF253318 AJ291673 AJ291674 AJ291675 NM_022139 NM_145762 BC172271 BC172567	99634	-	AY223855 AY223851 AY223850 AK095953 AK126498 AK304037 AF466287 AK123015 AK226148 BC125112 BC125113 AK300429 AY223853 AF466289 AB055891 AY223852 AY223854 NM_025220 NM_153202 AY358314 BC062663	118344	-	AF230073 BC141884 NM_023068	143358	-	AF106861|ATRN|8455|attractin##AK293010|ATRN|8455|attractin##NM_001207047|ATRN|8455|attractin##NM_139321|ATRN|8455|attractin##NM_139322|ATRN|8455|attractin##AK302730|ATRN|8455|attractin##BC101705|ATRN|8455|attractin##AK310540|C20orf194|25943|chromosome 20 open reading frame 194##AF253318|GFRA4|64096|GDNF family receptor alpha 4##AJ291673|GFRA4|64096|GDNF family receptor alpha 4##AJ291674|GFRA4|64096|GDNF family receptor alpha 4##AJ291675|GFRA4|64096|GDNF family receptor alpha 4##NM_022139|GFRA4|64096|GDNF family receptor alpha 4##NM_145762|GFRA4|64096|GDNF family receptor alpha 4##BC172271|GFRA4|64096|GDNF family receptor alpha 4##BC172567|GFRA4|64096|GDNF family receptor alpha 4##AY223855|ADAM33|80332|ADAM metallopeptidase domain 33##AY223851|ADAM33|80332|ADAM metallopeptidase domain 33##AY223850|ADAM33|80332|ADAM metallopeptidase domain 33##AK095953|ADAM33|80332|ADAM metallopeptidase domain 33##AK126498|ADAM33|80332|ADAM metallopeptidase domain 33##AK304037|ADAM33|80332|ADAM metallopeptidase domain 33##AF466287|ADAM33|80332|ADAM metallopeptidase domain 33##AK123015|ADAM33|80332|ADAM metallopeptidase domain 33##AK226148|ADAM33|80332|ADAM metallopeptidase domain 33##BC125112|ADAM33|80332|ADAM metallopeptidase domain 33##BC125113|ADAM33|80332|ADAM metallopeptidase domain 33##AK300429|ADAM33|80332|ADAM metallopeptidase domain 33##AY223853|ADAM33|80332|ADAM metallopeptidase domain 33##AF466289|ADAM33|80332|ADAM metallopeptidase domain 33##AB055891|ADAM33|80332|ADAM metallopeptidase domain 33##AY223852|ADAM33|80332|ADAM metallopeptidase domain 33##AY223854|ADAM33|80332|ADAM metallopeptidase domain 33##NM_025220|ADAM33|80332|ADAM metallopeptidase domain 33##NM_153202|ADAM33|80332|ADAM metallopeptidase domain 33##AY358314|ADAM33|80332|ADAM metallopeptidase domain 33##BC062663|ADAM33|80332|ADAM metallopeptidase domain 33##AF230073|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##BC141884|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##NM_023068|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin	0.996996	CTCF.p2:0:0.997
chr1	57286817	57286960	reg1017233.p1	8.511	+	AK125198 NM_001004303 TSC_hg19_v1_chr1_-_57285379	-1515	-	TSC_hg19_v1_chr1_+_57110986 AK314011 NM_006252 U06454 BC069680 BC069740 BC069823 EF056019	-175986	+	TSC_hg19_v1_chr1_-_57045237 NM_003713	-241643	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	33620	+	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	144828	-	TSC_hg19_v1_chr1_-_57888785 AK313144	601940	-	AK125198|C1orf168|199920|chromosome 1 open reading frame 168##NM_001004303|C1orf168|199920|chromosome 1 open reading frame 168##AK314011|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_006252|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##U06454|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069680|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069740|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069823|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##EF056019|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_003713|PPAP2B|8613|phosphatidic acid phosphatase type 2B##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide##AK313144|DAB1|1600|disabled homolog 1 (Drosophila)	0.98435	CTCF.p2:6:0.984
chr2	134601979	134602093	reg1015903.p2	8.511	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-275998	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-422682	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-1062342	-	NM_002410 D17716 AF113921	409849	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	874520	-	AK125008 NM_138326 BC016018 BC107420 AB071418	994182	+	AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	0.999868	CTCF.p2:8:1.000
chr2	222833952	222834051	reg1014809.p1	8.511	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	-396991	-	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-2341647	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-2371412	+	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	325019	-	AK057009 NM_153038 BC109388	328911	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	329524	-	BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140##EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3	0.0	
chrX	30754049	30754167	reg1014675.p1	8.511	+	TSC_hg19_v1_chrX_+_30671612 L13943 AK294938 AK294304 BX647604 AK308238 BC037549 CU688226 DQ891580 DQ894773	-82480	+	TSC_hg19_v1_chrX_+_30671539 AK313215	-82566	+	TSC_hg19_v1_chrX_+_30671493 BC042421 BC071595 NM_000167 NM_001128127 NM_001205019 NM_203391	-82614	+	TSC_hg19_v1_chrX_-_30907408 AK297274 NM_152787	153351	-	BC069538 BC100768 BC100769 BC100770 BC069069 AF285592 NM_031894	336055	-	CU688550 M92650 TSC_hg19_v1_chrX_-_31285072 BC070078 NM_004015 NM_004016 NM_004017 NM_004018 NM_004019 S42206 BC094758 AK299936 BC028720 S38776	530926	-	L13943|GK|2710|glycerol kinase##AK294938|GK|2710|glycerol kinase##AK294304|GK|2710|glycerol kinase##BX647604|GK|2710|glycerol kinase##AK308238|GK|2710|glycerol kinase##BC037549|GK|2710|glycerol kinase##DQ891580|GK|2710|glycerol kinase##DQ894773|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase##BC042421|GK|2710|glycerol kinase##BC071595|GK|2710|glycerol kinase##NM_000167|GK|2710|glycerol kinase##NM_001128127|GK|2710|glycerol kinase##NM_001205019|GK|2710|glycerol kinase##NM_203391|GK|2710|glycerol kinase##AK297274|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##NM_152787|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##BC069538|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100768|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100769|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100770|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC069069|FTHL17|53940|ferritin, heavy polypeptide-like 17##AF285592|FTHL17|53940|ferritin, heavy polypeptide-like 17##NM_031894|FTHL17|53940|ferritin, heavy polypeptide-like 17##M92650|DMD|1756|dystrophin##BC070078|DMD|1756|dystrophin##NM_004015|DMD|1756|dystrophin##NM_004016|DMD|1756|dystrophin##NM_004017|DMD|1756|dystrophin##NM_004018|DMD|1756|dystrophin##NM_004019|DMD|1756|dystrophin##S42206|DMD|1756|dystrophin##BC094758|DMD|1756|dystrophin##AK299936|DMD|1756|dystrophin##BC028720|DMD|1756|dystrophin##S38776|DMD|1756|dystrophin	0.529574	CTCF.p2:-26:0.530
chr20	13768964	13769077	reg1015361.p2	8.510	+	TSC_hg19_v1_chr20_+_13765698 NM_001039375 NM_024120 AK289781 AK091060 AX746757 BC073158 CU687252 BC005984	-3267	+	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	-3479	-	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	-149456	-	BC035741 AK302170 NM_025229	202238	-	AK131348 TSC_hg19_v1_chr20_+_13976161 NM_080676	207086	+	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	207316	+	NM_001039375|C20orf7|79133|chromosome 20 open reading frame 7##NM_024120|C20orf7|79133|chromosome 20 open reading frame 7##AK289781|C20orf7|79133|chromosome 20 open reading frame 7##AK091060|C20orf7|79133|chromosome 20 open reading frame 7##BC073158|C20orf7|79133|chromosome 20 open reading frame 7##BC005984|C20orf7|79133|chromosome 20 open reading frame 7##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AK131348|MACROD2|140733|MACRO domain containing 2##NM_080676|MACROD2|140733|MACRO domain containing 2##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2	0.98352	CTCF.p2:-10:0.984
chr21	47645198	47645294	reg1011234.p1	8.510	+	TSC_hg19_v1_chr21_-_47604362 AK309847 AK304535 NM_001142854 NM_032261	-40871	-	TSC_hg19_v1_chr21_-_47604340 BC084577	-40900	-	AL136871 TSC_hg19_v1_chr21_-_47604330	-40930	-	X87809 TSC_hg19_v1_chr21_-_47648594	3259	-	TSC_hg19_v1_chr21_-_47648618 AK226141 CU690148 DQ891234 DQ894418	3396	-	TSC_hg19_v1_chr21_-_47648679 D63807 S81221 BC035638	3431	-	AK309847|C21orf56|84221|chromosome 21 open reading frame 56##AK304535|C21orf56|84221|chromosome 21 open reading frame 56##NM_001142854|C21orf56|84221|chromosome 21 open reading frame 56##NM_032261|C21orf56|84221|chromosome 21 open reading frame 56##BC084577|C21orf56|84221|chromosome 21 open reading frame 56##AL136871|C21orf56|84221|chromosome 21 open reading frame 56##X87809|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##AK226141|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##DQ891234|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##DQ894418|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##D63807|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##S81221|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##BC035638|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)	0.654434	CTCF.p2:-11:0.654
chr6	138912142	138912269	reg1015201.p1	8.510	+	TSC_hg19_v1_chr6_-_138893682 NM_020464	-18497	-	TSC_hg19_v1_chr6_-_138820580 AK092744 AX747703	-91589	-	AK307584 NM_001144060 TSC_hg19_v1_chr6_-_138820579	-91627	-	TSC_hg19_v1_chr6_+_139013613 AK128874	101408	+	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	182585	+	AK092592 AX747618 NM_001242740	182596	-	NM_020464|NHSL1|57224|NHS-like 1##AK307584|NHSL1|57224|NHS-like 1##NM_001144060|NHSL1|57224|NHS-like 1##AK128874|FLJ46906|441172|uncharacterized LOC441172##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A##AK092592|LOC100507462|100507462|uncharacterized LOC100507462##NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462	0.990352	CTCF.p2:7:0.990
chr7	1215877	1216023	reg1016779.p1	8.510	+	TSC_hg19_v1_chr7_+_1200097 AK090593	-15837	+	TSC_hg19_v1_chr7_-_1199853 NM_182491	-16111	-	AK290170 TSC_hg19_v1_chr7_-_1199815	-16136	-	TSC_hg19_v1_chr7_+_1272552 NM_001080461	56652	+	CU691530 EU832111 EU832205 AK074068 BC037988 TSC_hg19_v1_chr7_-_1499102	283083	-	TSC_hg19_v1_chr7_-_1499107 AK027124 NM_182924	283157	-	NM_182491|ZFAND2A|90637|zinc finger, AN1-type domain 2A##AK290170|ZFAND2A|90637|zinc finger, AN1-type domain 2A##NM_001080461|UNCX|340260|UNC homeobox##EU832111|MICALL2|79778|MICAL-like 2##EU832205|MICALL2|79778|MICAL-like 2##AK074068|MICALL2|79778|MICAL-like 2##BC037988|MICALL2|79778|MICAL-like 2##AK027124|MICALL2|79778|MICAL-like 2##NM_182924|MICALL2|79778|MICAL-like 2	0.683845	CTCF.p2:-11:0.684
chr11	6732906	6733030	reg1016814.p1	8.509	+	TSC_hg19_v1_chr11_-_6704541 CR457177 DQ891581 DQ894774 DQ895036 AB463889 BC012306 AK026857 AF164797 AF141338 NM_022061	-28394	-	TSC_hg19_v1_chr11_-_6676982 AB053446 NM_003737	-56005	-	TSC_hg19_v1_chr11_-_6643809 BC038382	-89107	-	NM_001004490 BC140734	57268	-	BC151143 NM_001004489	73279	+	BC101489 BC101491 NM_003696	84107	-	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17##DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17##DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17##DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17##BC012306|MRPL17|63875|mitochondrial ribosomal protein L17##AK026857|MRPL17|63875|mitochondrial ribosomal protein L17##AF164797|MRPL17|63875|mitochondrial ribosomal protein L17##AF141338|MRPL17|63875|mitochondrial ribosomal protein L17##NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17##AB053446|DCHS1|8642|dachsous 1 (Drosophila)##NM_003737|DCHS1|8642|dachsous 1 (Drosophila)##BC038382|DCHS1|8642|dachsous 1 (Drosophila)##NM_001004490|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC140734|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC151143|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##NM_001004489|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	0.853592	CTCF.p2:-2:0.830
chr1	222638790	222638909	reg1014551.p1	8.509	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-723363	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-723419	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-723441	-	AY358602 BC007638 BC016552 NM_024746	82585	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	124328	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	152551	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.11589	
chr14	25620255	25620369	reg1016660.p1	8.509	+	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	-101074	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-516894	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-541451	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1446676	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	3615916	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	3616601	+	BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1	0.883537	CTCF.p2:13:0.884
chr17	40111812	40111917	reg1015646.p1	8.509	+	BC025390 TSC_hg19_v1_chr17_+_40086881 NM_031421 AL136760 BC067297 AK055498 AM393695 AB463310 CU688280 CU692988	-24939	+	TSC_hg19_v1_chr17_-_40075239 BC006195 NM_001096 NM_198830 AK295675 AK312315	-36599	-	TSC_hg19_v1_chr17_-_40075237 AK304802	-36631	-	TSC_hg19_v1_chr17_+_40118778 NM_033133	6875	+	TSC_hg19_v1_chr17_+_40118815 BC028040 BC006392 AK295351 AK026876 AK097833 AK098384 AK294179 BC001362 BC011046	6972	+	TSC_hg19_v1_chr17_+_40119669 AK308696	7862	+	BC025390|TTC25|83538|tetratricopeptide repeat domain 25##NM_031421|TTC25|83538|tetratricopeptide repeat domain 25##AL136760|TTC25|83538|tetratricopeptide repeat domain 25##BC067297|TTC25|83538|tetratricopeptide repeat domain 25##AK055498|TTC25|83538|tetratricopeptide repeat domain 25##AM393695|TTC25|83538|tetratricopeptide repeat domain 25##BC006195|ACLY|47|ATP citrate lyase##NM_001096|ACLY|47|ATP citrate lyase##NM_198830|ACLY|47|ATP citrate lyase##AK295675|ACLY|47|ATP citrate lyase##AK312315|ACLY|47|ATP citrate lyase##AK304802|ACLY|47|ATP citrate lyase##NM_033133|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##BC028040|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##BC006392|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK295351|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK026876|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK097833|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK098384|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK294179|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##BC001362|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##BC011046|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase	0.455136	CTCF.p2:11:0.455
chr8	38029210	38029305	reg1016232.p1	8.509	+	CU679741 CR456803 CR541850 DQ891806 DQ894990 BC010550 AF035277 TSC_hg19_v1_chr8_-_38008471 U17280 AK315122 BX647744 AK090513 S79669 NM_000349	-20792	-	NM_001105214 AK291938 AF056717 BC015936	-65855	+	TSC_hg19_v1_chr8_+_37963046 AK291750 AK293699 AB020982 AF056718 AK298483 AB385056 AK311336	-66173	+	AB527991 BC001767 TSC_hg19_v1_chr8_-_38034002 AF000177 AK312159 AJ238094	4677	-	TSC_hg19_v1_chr8_+_38034068 BC000800 NM_001204878 NM_004874	4837	+	AF147348 TSC_hg19_v1_chr8_-_38034209	4931	-	CR456803|STAR|6770|steroidogenic acute regulatory protein##CR541850|STAR|6770|steroidogenic acute regulatory protein##DQ891806|STAR|6770|steroidogenic acute regulatory protein##DQ894990|STAR|6770|steroidogenic acute regulatory protein##BC010550|STAR|6770|steroidogenic acute regulatory protein##AF035277|STAR|6770|steroidogenic acute regulatory protein##U17280|STAR|6770|steroidogenic acute regulatory protein##AK315122|STAR|6770|steroidogenic acute regulatory protein##BX647744|STAR|6770|steroidogenic acute regulatory protein##AK090513|STAR|6770|steroidogenic acute regulatory protein##S79669|STAR|6770|steroidogenic acute regulatory protein##NM_000349|STAR|6770|steroidogenic acute regulatory protein##NM_001105214|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK291938|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AF056717|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##BC015936|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK291750|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK293699|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AB020982|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AF056718|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK298483|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK311336|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##BC001767|LSM1|27257|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF000177|LSM1|27257|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312159|LSM1|27257|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238094|LSM1|27257|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC000800|BAG4|9530|BCL2-associated athanogene 4##NM_001204878|BAG4|9530|BCL2-associated athanogene 4##NM_004874|BAG4|9530|BCL2-associated athanogene 4##AF147348|LSM1|27257|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.967967	CTCF.p2:-5:0.968
chr1	18700530	18700685	reg1014220.p2	8.508	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	-266330	+	AK057339 NM_030812 BC028909 U20582	-618761	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	-755742	+	NM_152375	106816	+	NM_001135254 NM_002584 NM_013945 X96743	256892	+	NM_152232 AB527225	485548	-	AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_152375|KLHDC7A|127707|kelch domain containing 7A##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2	0.987035	CTCF.p2:-26:0.987
chr12	79738768	79738877	reg1014971.p1	8.508	+	CR627387 NM_001135806 AK308743	-299371	+	TSC_hg19_v1_chr12_+_79258794 BC058917	-480005	+	TSC_hg19_v1_chr12_+_79258597 BC041373	-480230	+	AB590922 CR536549 BC007018 TSC_hg19_v1_chr12_-_80084318	345393	-	U63809 TSC_hg19_v1_chr12_-_80084784 NM_002583	345943	-	AK302692 NM_001143886	568868	-	CR627387|SYT1|6857|synaptotagmin I##NM_001135806|SYT1|6857|synaptotagmin I##AK308743|SYT1|6857|synaptotagmin I##BC058917|SYT1|6857|synaptotagmin I##BC041373|SYT1|6857|synaptotagmin I##CR536549|PAWR|5074|PRKC, apoptosis, WT1, regulator##BC007018|PAWR|5074|PRKC, apoptosis, WT1, regulator##U63809|PAWR|5074|PRKC, apoptosis, WT1, regulator##NM_002583|PAWR|5074|PRKC, apoptosis, WT1, regulator##AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	0.935477	CTCF.p2:11:0.935
chr5	150806916	150807072	reg1016168.p1	8.508	+	BC101100 BC101101 BC101102 BC101103 AK297682 AY162214 AK122630 AK309575 NM_181776	-79875	-	AK127978 NM_001145017 NM_181774	-123665	-	NM_000405 NM_001167607 TSC_hg19_v1_chr5_+_150632745 AK225978 L01439 M76477 AK312494 X62078 AK298867 BC009273 X61095 CU679281 DQ891914 DQ895098 X16087	-174279	+	TSC_hg19_v1_chr5_+_150827163 NM_078483 BX537963 AY227111	20166	+	AK309323 TSC_hg19_v1_chr5_+_150827187	20195	+	TSC_hg19_v1_chr5_+_150827239 AY162213 BC136437 BC136438	20250	+	BC101100|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101101|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101102|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101103|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK297682|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AY162214|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK309575|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##NM_181776|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK127978|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_001145017|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_181774|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_000405|GM2A|2760|GM2 ganglioside activator##NM_001167607|GM2A|2760|GM2 ganglioside activator##L01439|GM2A|2760|GM2 ganglioside activator##M76477|GM2A|2760|GM2 ganglioside activator##AK312494|GM2A|2760|GM2 ganglioside activator##X62078|GM2A|2760|GM2 ganglioside activator##AK298867|GM2A|2760|GM2 ganglioside activator##BC009273|GM2A|2760|GM2 ganglioside activator##X61095|GM2A|2760|GM2 ganglioside activator##DQ891914|GM2A|2760|GM2 ganglioside activator##DQ895098|GM2A|2760|GM2 ganglioside activator##X16087|GM2A|2760|GM2 ganglioside activator##NM_078483|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BX537963|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AY227111|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AK309323|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AY162213|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136437|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136438|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1	0.960499	CTCF.p2:-27:0.960
chrX	69250461	69250585	reg1015665.p2	8.508	+	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	-414588	+	AF087142 NM_015686 BC136518 BC136519	-525440	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	-865217	-	AB528121 AY605053 NM_001002254	19261	-	AK098697 NM_207320 BC137355 BC137356	31819	+	AK054596 BC004137 NM_001551 AK315660	102816	+	AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AY605053|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##NM_001002254|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##AK098697|OTUD6A|139562|OTU domain containing 6A##NM_207320|OTUD6A|139562|OTU domain containing 6A##BC137355|OTUD6A|139562|OTU domain containing 6A##BC137356|OTUD6A|139562|OTU domain containing 6A##AK054596|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##BC004137|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##NM_001551|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##AK315660|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	0.946262	CTCF.p2:-7:0.946
chr10	95117565	95117686	reg1017119.p1	8.507	+	AK075374 NM_000783 AF005418	-283969	+	AK027560 NM_057157	-284394	+	AY356349 NM_183374	-296605	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	124423	-	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	138763	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	208884	+	AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1	0.474129	CTCF.p2:11:0.474
chr18	46439666	46439786	reg1017817.p1	8.507	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-373953	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-504017	-	AM988836 AK296709 NM_001039360 EF120357	-776027	-	AK131394 NM_001190823	29421	-	AK301535 NM_001190822	35976	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	37041	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.664448	CTCF.p2:12:0.664
chr6	86885010	86885126	reg1016367.p1	8.507	+	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	-496631	-	TSC_hg19_v1_chr6_-_86353055 AF037448 NM_001159677 NM_006372	-532043	-	TSC_hg19_v1_chr6_-_86352716 AF155568	-532353	-	NM_000865	761955	+	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	919750	-	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	980221	+	BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##AF037448|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159677|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_006372|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AF155568|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292	0.830069	CTCF.p2:-1:0.830
chr1	96701856	96701968	reg1016559.p1	8.505	+	AK292699 NM_001128142 NM_001199682 NM_015485 TSC_hg19_v1_chr1_+_95699765 AK292665 AK296476 AL050062 BC125142 BC065813 BC010936 BC016307 AB528227 AM392773 AM393257 CR533493	-1002164	+	TSC_hg19_v1_chr1_-_95699509 AK090700	-1002390	-	BC063464 NM_001199691	-1118434	+	AB055763 TSC_hg19_v1_chr1_-_97145197	443284	-	NM_021190 TSC_hg19_v1_chr1_+_97187343 AK092216 AB051232 AK299755 AK299922 AB209266 AF530580 AF530581 AF176085 AK299897 BC016582 AB051233	485372	+	BC030757 TSC_hg19_v1_chr1_+_97260652	558671	+	AK292699|RWDD3|25950|RWD domain containing 3##NM_001128142|RWDD3|25950|RWD domain containing 3##NM_001199682|RWDD3|25950|RWD domain containing 3##NM_015485|RWDD3|25950|RWD domain containing 3##AK292665|RWDD3|25950|RWD domain containing 3##AK296476|RWDD3|25950|RWD domain containing 3##AL050062|RWDD3|25950|RWD domain containing 3##BC125142|RWDD3|25950|RWD domain containing 3##BC065813|RWDD3|25950|RWD domain containing 3##BC010936|RWDD3|25950|RWD domain containing 3##BC016307|RWDD3|25950|RWD domain containing 3##AM392773|RWDD3|25950|RWD domain containing 3##AM393257|RWDD3|25950|RWD domain containing 3##CR533493|RWDD3|25950|RWD domain containing 3##BC063464|TMEM56-RWDD3|100527978|TMEM56-RWDD3 readthrough##NM_001199691|TMEM56-RWDD3|100527978|TMEM56-RWDD3 readthrough##NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2##AK092216|PTBP2|58155|polypyrimidine tract binding protein 2##AB051232|PTBP2|58155|polypyrimidine tract binding protein 2##AK299755|PTBP2|58155|polypyrimidine tract binding protein 2##AK299922|PTBP2|58155|polypyrimidine tract binding protein 2##AB209266|PTBP2|58155|polypyrimidine tract binding protein 2##AF530580|PTBP2|58155|polypyrimidine tract binding protein 2##AF530581|PTBP2|58155|polypyrimidine tract binding protein 2##AF176085|PTBP2|58155|polypyrimidine tract binding protein 2##AK299897|PTBP2|58155|polypyrimidine tract binding protein 2##BC016582|PTBP2|58155|polypyrimidine tract binding protein 2##AB051233|PTBP2|58155|polypyrimidine tract binding protein 2	0.982842	CTCF.p2:-18:0.983
chr7	130756587	130756687	reg1012560.p1	8.505	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-337710	-	AF294347 AF431815 BC038415 NM_052933	-385282	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-403042	-	TSC_hg19_v1_chr7_-_130792857 BC047367	36222	-	AK294384 NM_001145354	38217	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	255969	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.993933	CTCF.p2:-4:0.994
chr10	63044163	63044304	reg1018338.p1	8.504	+	AK075129 BC093035 TSC_hg19_v1_chr10_-_62761269	-282993	-	BC041791 AB018283 BC032848 TSC_hg19_v1_chr10_-_62704033 NM_001242359 NM_014836 AK307630	-340281	-	TSC_hg19_v1_chr10_+_62538253 BC107750 AK291939	-505962	+	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	168726	-	CR749606 NM_178505	168974	-	BC041932 NM_173554	378485	+	AK075129|RHOBTB1|9886|Rho-related BTB domain containing 1##BC093035|RHOBTB1|9886|Rho-related BTB domain containing 1##BC041791|RHOBTB1|9886|Rho-related BTB domain containing 1##AB018283|RHOBTB1|9886|Rho-related BTB domain containing 1##BC032848|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_001242359|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_014836|RHOBTB1|9886|Rho-related BTB domain containing 1##AK307630|RHOBTB1|9886|Rho-related BTB domain containing 1##BC107750|CDK1|983|cyclin-dependent kinase 1##AK291939|CDK1|983|cyclin-dependent kinase 1##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26##CR749606|TMEM26|219623|transmembrane protein 26##NM_178505|TMEM26|219623|transmembrane protein 26##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107	0.999748	CTCF.p2:3:1.000
chr19	58693397	58693543	reg1017445.p1	8.504	+	BC047501 NM_024620 AK095349 AK096542	-31322	-	AK096238 AK294376 NM_001145542	-63693	-	TSC_hg19_v1_chr19_-_58609613 AK022957 AY280799 NM_001145543 NM_001145544 NM_023926	-83803	-	TSC_hg19_v1_chr19_+_58694439 AB029149 NM_016324 NM_016325 NM_133502 AK222855 AK222878 AK316429	942	+	TSC_hg19_v1_chr19_+_58694465 AB029150 AK295036	1001	+	AF275680 TSC_hg19_v1_chr19_+_58694787 AK022328 AK297466 AK296929	1262	+	BC047501|ZNF329|79673|zinc finger protein 329##NM_024620|ZNF329|79673|zinc finger protein 329##AK095349|ZNF329|79673|zinc finger protein 329##AK096542|ZNF329|79673|zinc finger protein 329##AK096238|ZSCAN18|65982|zinc finger and SCAN domain containing 18##AK294376|ZSCAN18|65982|zinc finger and SCAN domain containing 18##NM_001145542|ZSCAN18|65982|zinc finger and SCAN domain containing 18##AK022957|ZSCAN18|65982|zinc finger and SCAN domain containing 18##AY280799|ZSCAN18|65982|zinc finger and SCAN domain containing 18##NM_001145543|ZSCAN18|65982|zinc finger and SCAN domain containing 18##NM_001145544|ZSCAN18|65982|zinc finger and SCAN domain containing 18##NM_023926|ZSCAN18|65982|zinc finger and SCAN domain containing 18##AB029149|ZNF274|10782|zinc finger protein 274##NM_016324|ZNF274|10782|zinc finger protein 274##NM_016325|ZNF274|10782|zinc finger protein 274##NM_133502|ZNF274|10782|zinc finger protein 274##AK222855|ZNF274|10782|zinc finger protein 274##AK222878|ZNF274|10782|zinc finger protein 274##AK316429|ZNF274|10782|zinc finger protein 274##AB029150|ZNF274|10782|zinc finger protein 274##AK295036|ZNF274|10782|zinc finger protein 274##AF275680|ZNF274|10782|zinc finger protein 274##AK022328|ZNF274|10782|zinc finger protein 274##AK297466|ZNF274|10782|zinc finger protein 274##AK296929|ZNF274|10782|zinc finger protein 274	0.997739	CTCF.p2:-11:0.998
chr2	161180840	161180935	reg1013394.p1	8.504	+	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	-50698	-	AK304203 AL831998 TSC_hg19_v1_chr2_-_161056784 AK290300 AK313944	-124092	-	AB463075 AM393800 M35198 NM_000888 BC121178 BC143656	-124300	-	CU676342 D28482 X77494 AK225887 L11289 TSC_hg19_v1_chr2_-_161350025 AK309949 BC012992 BC012993 AK297812	169072	-	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	169430	-	NM_004180 NM_133484 U59863 U63830	812578	+	BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK304203|ITGB6|3694|integrin, beta 6##AL831998|ITGB6|3694|integrin, beta 6##AK290300|ITGB6|3694|integrin, beta 6##AK313944|ITGB6|3694|integrin, beta 6##AM393800|ITGB6|3694|integrin, beta 6##M35198|ITGB6|3694|integrin, beta 6##NM_000888|ITGB6|3694|integrin, beta 6##BC121178|ITGB6|3694|integrin, beta 6##BC143656|ITGB6|3694|integrin, beta 6##D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_004180|TANK|10010|TRAF family member-associated NFKB activator##NM_133484|TANK|10010|TRAF family member-associated NFKB activator##U59863|TANK|10010|TRAF family member-associated NFKB activator##U63830|TANK|10010|TRAF family member-associated NFKB activator	0.819722	CTCF.p2:-1:0.820
chr4	4010406	4010540	reg1018067.p1	8.504	+	BC044637 TSC_hg19_v1_chr4_-_3957162	-53318	-	J03853 NM_000683	-242178	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-242355	+	BC130430 BC130432 NM_177998	218144	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	239475	-	TSC_hg19_v1_chr4_-_4291782 AL136750 NM_001145725	281294	-	BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128##AL136750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_001145725|LYAR|55646|Ly1 antibody reactive homolog (mouse)	0.955848	CTCF.p2:-5:0.956
chr4	61671550	61671666	reg1015971.p1	8.504	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-3695040	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-3695076	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-3695209	-	TSC_hg19_v1_chr4_+_62066948 AK309793	395367	+	NM_015236	691230	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	3603488	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.998289	CTCF.p2:0:0.998
chr9	5425141	5425281	reg1014707.p1	8.504	+	X00949 DQ893302 DQ896468 BC005956 NM_006911	-85403	-	HQ258745 NM_005059 NM_134441 X00948 BC126415 BC126419	-120617	-	BC026254 AK291543 L34838 NM_002195 CU693182	-193749	+	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	12669	-	TSC_hg19_v1_chr9_+_5450455 NM_014143 DQ836393 AK300470 AK314567 AF233516 BC069381	25296	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	85452	+	X00949|RLN1|6013|relaxin 1##DQ893302|RLN1|6013|relaxin 1##DQ896468|RLN1|6013|relaxin 1##BC005956|RLN1|6013|relaxin 1##NM_006911|RLN1|6013|relaxin 1##HQ258745|RLN2|6019|relaxin 2##NM_005059|RLN2|6019|relaxin 2##NM_134441|RLN2|6019|relaxin 2##X00948|RLN2|6019|relaxin 2##BC126415|RLN2|6019|relaxin 2##BC126419|RLN2|6019|relaxin 2##BC026254|INSL4|3641|insulin-like 4 (placenta)##AK291543|INSL4|3641|insulin-like 4 (placenta)##L34838|INSL4|3641|insulin-like 4 (placenta)##NM_002195|INSL4|3641|insulin-like 4 (placenta)##BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46##NM_014143|CD274|29126|CD274 molecule##DQ836393|CD274|29126|CD274 molecule##AK300470|CD274|29126|CD274 molecule##AK314567|CD274|29126|CD274 molecule##AF233516|CD274|29126|CD274 molecule##BC069381|CD274|29126|CD274 molecule##AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2	0.715345	CTCF.p2:18:0.715
chrUn_gl000227	30789	30921	reg1017939.p1	8.504	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.996754	CTCF.p2:-10:0.997
chr1	161454549	161454657	reg1015388.p1	8.503	+	NM_001013625	-116940	-	NM_001035511 NM_001035512 NM_001035513 NM_003001 TSC_hg19_v1_chr1_+_161284170 AK131051 AK293687 AK294305 BC020808 BC066329 U57877 AB211234 AB211235 AB201252 AB212048 BC012735 BC033626 D49737	-170424	+	BT006765 DQ895885 EU176378 S66705 D10537 BC006491 AK313555 TSC_hg19_v1_chr1_-_161279760 NM_000530	-174861	-	TSC_hg19_v1_chr1_+_161475246 NM_001136219 NM_021642 BC019931 AK226059 AK225438 AK298657 AK315225 Y00644 AK225601 M31932 CU676732 AK298734 BC020823 AB529040 DQ892037 DQ895228 J03619 M28697 X62572	20632	+	NM_002155	39432	+	CU676090 CU689692 AK223268 TSC_hg19_v1_chr1_-_161519555 BC033678 AK223295 X52645 AB528616 CU691394	64976	-	NM_001013625|C1orf192|257177|chromosome 1 open reading frame 192##NM_001035511|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001035512|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001035513|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_003001|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK131051|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK293687|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK294305|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC020808|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC066329|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##U57877|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB211234|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB211235|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB201252|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB212048|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC012735|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC033626|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##D49737|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BT006765|MPZ|4359|myelin protein zero##DQ895885|MPZ|4359|myelin protein zero##EU176378|MPZ|4359|myelin protein zero##S66705|MPZ|4359|myelin protein zero##D10537|MPZ|4359|myelin protein zero##BC006491|MPZ|4359|myelin protein zero##AK313555|MPZ|4359|myelin protein zero##NM_000530|MPZ|4359|myelin protein zero##NM_001136219|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##NM_021642|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##BC019931|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK226059|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK225438|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK298657|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK315225|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##Y00644|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK225601|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##M31932|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK298734|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##BC020823|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##DQ892037|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##DQ895228|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##J03619|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##M28697|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##X62572|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##NM_002155|HSPA6|3310|heat shock 70kDa protein 6 (HSP70B')##AK223268|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##BC033678|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK223295|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##X52645|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)	0.052379	
chr11	62630220	62630341	reg1015161.p1	8.503	+	TSC_hg19_v1_chr11_+_62623580 NM_001012662 NM_001012664 NM_002394 BC001061 AK025584 BC003000	-6730	+	BC000839 BC027980 BC011809 BC017253 BC063571 TSC_hg19_v1_chr11_-_62623358 AK095849	-6995	-	AK001301 NM_018093	-22653	-	TSC_hg19_v1_chr11_+_62648367 NM_001013251 AK304685 AK090758 AX746603 J03569 AK304497 AB018010 J02939 AK225304 J02769 EU832612 EU832683	18227	+	TSC_hg19_v1_chr11_+_62649170 AK308797 AK311592 AF055031	18912	+	BC007740 AK312374 TSC_hg19_v1_chr11_-_62688827	58503	-	NM_001012662|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_001012664|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_002394|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC001061|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK025584|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC003000|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC000839|SNHG1|23642|small nucleolar RNA host gene 1 (non-protein coding)##BC027980|SNHG1|23642|small nucleolar RNA host gene 1 (non-protein coding)##BC011809|SNHG1|23642|small nucleolar RNA host gene 1 (non-protein coding)##BC017253|SNHG1|23642|small nucleolar RNA host gene 1 (non-protein coding)##BC063571|SNHG1|23642|small nucleolar RNA host gene 1 (non-protein coding)##AK095849|SNHG1|23642|small nucleolar RNA host gene 1 (non-protein coding)##AK001301|WDR74|54663|WD repeat domain 74##NM_018093|WDR74|54663|WD repeat domain 74##NM_001013251|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK304685|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK090758|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##J03569|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK304497|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AB018010|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##J02939|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK225304|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##J02769|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##EU832612|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##EU832683|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK308797|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK311592|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AF055031|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC007740|CHRM1|1128|cholinergic receptor, muscarinic 1##AK312374|CHRM1|1128|cholinergic receptor, muscarinic 1	0.300788	CTCF.p2:15:0.301
chr1	60442603	60442730	reg1017283.p1	8.503	+	BC032594 TSC_hg19_v1_chr1_-_60392478	-50197	-	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	-50281	-	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	-162014	+	BC027878 AK124828 NM_152377	96767	-	AK092769 TSC_hg19_v1_chr1_+_61542908	1100190	+	TSC_hg19_v1_chr1_+_61542928 AK299289 NM_001145511	1100270	+	BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)##BC027878|C1orf87|127795|chromosome 1 open reading frame 87##AK124828|C1orf87|127795|chromosome 1 open reading frame 87##NM_152377|C1orf87|127795|chromosome 1 open reading frame 87##AK299289|NFIA|4774|nuclear factor I/A##NM_001145511|NFIA|4774|nuclear factor I/A	0.795655	CTCF.p2:2:0.796
chr16	29106224	29106336	reg1014535.p2	8.501	+	TSC_hg19_v1_chr16_+_29086310 BC042920 AK225670 AK298442 AK301253	-19975	+	AK307342 NM_001014987 NM_001014988 NM_014387 TSC_hg19_v1_chr16_+_28996403 AJ223280	-109882	+	BC011563 NM_001014989	-110134	+	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	359571	+	BC022832 NM_001031827 NM_001039182	360004	-	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	364946	+	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK307342|LAT|27040|linker for activation of T cells##NM_001014987|LAT|27040|linker for activation of T cells##NM_001014988|LAT|27040|linker for activation of T cells##NM_014387|LAT|27040|linker for activation of T cells##AJ223280|LAT|27040|linker for activation of T cells##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3	0.93743	CTCF.p2:-2:0.937
chr12	119982941	119983055	reg1015414.p1	8.500	+	BC040553 NM_178499	-210482	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	-366319	+	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	-563651	+	NM_001136534 AK296289	48302	+	TSC_hg19_v1_chr12_+_120105769 AK312495 NM_006253 BC017671 AF022116 BC001007 BC001056 BC001823 BC018818 U83994 AK301165 Y12556 AB590811 AJ224515	122854	+	AK123136 TSC_hg19_v1_chr12_-_120241305	258299	-	BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##NM_001136534|TMEM233|387890|transmembrane protein 233##AK296289|TMEM233|387890|transmembrane protein 233##AK312495|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##NM_006253|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC017671|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AF022116|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001007|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001056|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001823|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC018818|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##U83994|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK301165|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##Y12556|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AJ224515|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK123136|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)	0.99065	CTCF.p2:20:0.991
chr10	119444345	119444459	reg1014832.p1	8.499	+	TSC_hg19_v1_chr10_+_119302713 AB463605	-141659	+	AF301598 NM_001165924 NM_004098	-142447	+	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	-142486	-	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	361642	-	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	362028	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	657422	-	AF301598|EMX2|2018|empty spiracles homeobox 2##NM_001165924|EMX2|2018|empty spiracles homeobox 2##NM_004098|EMX2|2018|empty spiracles homeobox 2##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A	0.859885	CTCF.p2:27:0.774
chr17	28978012	28978119	reg1015647.p1	8.499	+	BC096718 BC098126 BC098273 NM_015594	-91482	+	TSC_hg19_v1_chr17_+_28804434 AK000606 AK291381 NM_001007024 NM_001007025 NM_004871 AK298714 AF047438 BC012620 AF073926 BC040471	-173632	+	AK316409 NM_001199775 AK302878	-270550	+	TSC_hg19_v1_chr17_+_29058664 BC047718	80623	+	TSC_hg19_v1_chr17_-_29151711 DQ298450 DQ892276 CU692798 AK296238 AF046059 BC023567	173610	-	TSC_hg19_v1_chr17_-_29151725 AK313315 NM_015986	173698	-	BC096718|TBC1D29|26083|TBC1 domain family, member 29##BC098126|TBC1D29|26083|TBC1 domain family, member 29##BC098273|TBC1D29|26083|TBC1 domain family, member 29##NM_015594|TBC1D29|26083|TBC1 domain family, member 29##AK000606|GOSR1|9527|golgi SNAP receptor complex member 1##AK291381|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1##NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1##AK298714|GOSR1|9527|golgi SNAP receptor complex member 1##AF047438|GOSR1|9527|golgi SNAP receptor complex member 1##BC012620|GOSR1|9527|golgi SNAP receptor complex member 1##AF073926|GOSR1|9527|golgi SNAP receptor complex member 1##BC040471|GOSR1|9527|golgi SNAP receptor complex member 1##AK316409|CPD|1362|carboxypeptidase D##NM_001199775|CPD|1362|carboxypeptidase D##AK302878|CPD|1362|carboxypeptidase D##BC047718|SUZ12P|440423|suppressor of zeste 12 homolog pseudogene##DQ298450|CRLF3|51379|cytokine receptor-like factor 3##DQ892276|CRLF3|51379|cytokine receptor-like factor 3##AK296238|CRLF3|51379|cytokine receptor-like factor 3##AF046059|CRLF3|51379|cytokine receptor-like factor 3##BC023567|CRLF3|51379|cytokine receptor-like factor 3##AK313315|CRLF3|51379|cytokine receptor-like factor 3##NM_015986|CRLF3|51379|cytokine receptor-like factor 3	0.988117	CTCF.p2:-2:0.988
chr17	47113512	47113634	reg1017276.p1	8.499	+	TSC_hg19_v1_chr17_+_47074830 NM_001160423 NM_006546 AF198254 AK313229	-38743	+	BC096146 BC096147 BC096148 BC096149 BC069100 BC069663 BC069686 BC069746 M18185 NM_004123	-67620	-	AB464229 CU679209 CU691602 TSC_hg19_v1_chr17_-_47022173 AF156102 BC008976 NM_007241 BC038830	-91437	-	AK302876 NM_001159388	96248	+	TSC_hg19_v1_chr17_+_47210130 NM_001159387 AJ517771	96527	+	AF510036 AJ517770 NM_153446 BC113675 BC113677 HQ258321 HQ258467	96784	+	NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##BC096146|GIP|2695|gastric inhibitory polypeptide##BC096147|GIP|2695|gastric inhibitory polypeptide##BC096148|GIP|2695|gastric inhibitory polypeptide##BC096149|GIP|2695|gastric inhibitory polypeptide##BC069100|GIP|2695|gastric inhibitory polypeptide##BC069663|GIP|2695|gastric inhibitory polypeptide##BC069686|GIP|2695|gastric inhibitory polypeptide##BC069746|GIP|2695|gastric inhibitory polypeptide##M18185|GIP|2695|gastric inhibitory polypeptide##NM_004123|GIP|2695|gastric inhibitory polypeptide##AF156102|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##BC008976|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##NM_007241|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##BC038830|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##AK302876|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159388|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159387|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517771|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AF510036|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517770|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_153446|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113675|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113677|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258321|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258467|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2	0.637672	CTCF.p2:-3:0.550
chr7	131109136	131109244	reg1014262.p2	8.499	+	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-96551	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	-96584	+	AK294384 NM_001145354	-314336	+	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	132173	-	TSC_hg19_v1_chr7_-_131833385 AL834504	724205	-	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	1083730	-	BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##AL834504|PLXNA4|91584|plexin A4##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4	0.980967	CTCF.p2:-6:0.981
chr8	25434843	25434963	reg1013963.p1	8.499	+	TSC_hg19_v1_chr8_+_25316748 AK299278 AL833627 BC015691 BC104450 BC104451	-118069	+	AK292505 TSC_hg19_v1_chr8_+_25316724	-118181	+	NM_152562	-118391	+	BC137106 BC137107 NM_022659 TSC_hg19_v1_chr8_-_25902675 AK001144	467763	-	TSC_hg19_v1_chr8_+_26149035 NM_002717	714118	+	AK314823 TSC_hg19_v1_chr8_+_26149043 BC041071	714146	+	AK299278|CDCA2|157313|cell division cycle associated 2##AL833627|CDCA2|157313|cell division cycle associated 2##BC015691|CDCA2|157313|cell division cycle associated 2##BC104450|CDCA2|157313|cell division cycle associated 2##BC104451|CDCA2|157313|cell division cycle associated 2##AK292505|CDCA2|157313|cell division cycle associated 2##NM_152562|CDCA2|157313|cell division cycle associated 2##BC137106|EBF2|64641|early B-cell factor 2##BC137107|EBF2|64641|early B-cell factor 2##NM_022659|EBF2|64641|early B-cell factor 2##AK001144|EBF2|64641|early B-cell factor 2##NM_002717|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AK314823|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##BC041071|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha	0.265872	CTCF.p2:-28:0.266
chr7	31017613	31017732	reg1014657.p1	8.498	+	L01406 L09237 NM_000823 AY557192	-14013	+	AK309608 NM_001185060 AK309691 AK309688 NM_001185061 NM_001185062	-56656	+	NM_198098 TSC_hg19_v1_chr7_+_30951467 AK298091 AK298313 AK300995 AK304684 AK312656 AK301351 BC022486 M77829 S73482 U41517 DQ892366 DQ895575 CU692648 AB463415 AB451275 AB451402	-66203	+	TSC_hg19_v1_chr7_+_31092073 NM_001118 NM_001199635 NM_001199636 NM_001199637 AK290046 AK226138	74432	+	AK055238 AF248954 NM_022728	362850	-	AK128026 NM_194300	539305	+	L01406|GHRHR|2692|growth hormone releasing hormone receptor##L09237|GHRHR|2692|growth hormone releasing hormone receptor##NM_000823|GHRHR|2692|growth hormone releasing hormone receptor##AY557192|GHRHR|2692|growth hormone releasing hormone receptor##AK309608|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185060|AQP1|358|aquaporin 1 (Colton blood group)##AK309691|AQP1|358|aquaporin 1 (Colton blood group)##AK309688|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185061|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185062|AQP1|358|aquaporin 1 (Colton blood group)##NM_198098|AQP1|358|aquaporin 1 (Colton blood group)##AK298091|AQP1|358|aquaporin 1 (Colton blood group)##AK298313|AQP1|358|aquaporin 1 (Colton blood group)##AK300995|AQP1|358|aquaporin 1 (Colton blood group)##AK304684|AQP1|358|aquaporin 1 (Colton blood group)##AK312656|AQP1|358|aquaporin 1 (Colton blood group)##AK301351|AQP1|358|aquaporin 1 (Colton blood group)##BC022486|AQP1|358|aquaporin 1 (Colton blood group)##M77829|AQP1|358|aquaporin 1 (Colton blood group)##S73482|AQP1|358|aquaporin 1 (Colton blood group)##U41517|AQP1|358|aquaporin 1 (Colton blood group)##DQ892366|AQP1|358|aquaporin 1 (Colton blood group)##DQ895575|AQP1|358|aquaporin 1 (Colton blood group)##AB451275|AQP1|358|aquaporin 1 (Colton blood group)##AB451402|AQP1|358|aquaporin 1 (Colton blood group)##NM_001118|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199635|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199636|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199637|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK290046|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK226138|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129	0.986271	CTCF.p2:12:0.986
chr16	3033727	3033885	reg1017359.p2	8.497	+	TSC_hg19_v1_chr16_-_3030479 NM_004203 NM_182687	-3300	-	AK098452 TSC_hg19_v1_chr16_-_3030418 AK301926 AK303005 AK097642	-3399	-	TSC_hg19_v1_chr16_+_3019556 AK291373 AK054564 AK092173 AX747391 BC033703 AL832527 EU831903 EU831998 AY424282	-14236	+	AK091002 NM_020982	28650	+	BC008934 AK075329 NM_021195	34368	-	TSC_hg19_v1_chr16_+_3070368 NM_016639 BC002718 AB035480 AB035481 AF191148 BC064377 BC020538 DQ892968 DQ896216 AB590147	36549	+	NM_004203|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##NM_182687|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK098452|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK301926|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK303005|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK097642|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK291373|PAQR4|124222|progestin and adipoQ receptor family member IV##AK054564|PAQR4|124222|progestin and adipoQ receptor family member IV##AK092173|PAQR4|124222|progestin and adipoQ receptor family member IV##BC033703|PAQR4|124222|progestin and adipoQ receptor family member IV##AL832527|PAQR4|124222|progestin and adipoQ receptor family member IV##EU831903|PAQR4|124222|progestin and adipoQ receptor family member IV##EU831998|PAQR4|124222|progestin and adipoQ receptor family member IV##AY424282|PAQR4|124222|progestin and adipoQ receptor family member IV##AK091002|CLDN9|9080|claudin 9##NM_020982|CLDN9|9080|claudin 9##BC008934|CLDN6|9074|claudin 6##AK075329|CLDN6|9074|claudin 6##NM_021195|CLDN6|9074|claudin 6##NM_016639|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##BC002718|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##AB035480|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##AB035481|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##AF191148|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##BC064377|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##BC020538|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##DQ892968|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A##DQ896216|TNFRSF12A|51330|tumor necrosis factor receptor superfamily, member 12A	0.0	
chr3	11102541	11102669	reg1015662.p1	8.497	+	TSC_hg19_v1_chr3_+_11034439 BC057291 BC033904	-68143	+	NM_003042 TSC_hg19_v1_chr3_+_11034421	-68184	+	TSC_hg19_v1_chr3_+_10857912 AK312719 BC036083 NM_014229 S75989 AB527355	-244698	+	AK289412 NM_001098213	76173	+	NM_001098212 AK292157 AK312879	93609	+	TSC_hg19_v1_chr3_+_11267680 NM_001098211	165068	+	BC057291|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC033904|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##AK289412|HRH1|3269|histamine receptor H1##NM_001098213|HRH1|3269|histamine receptor H1##NM_001098212|HRH1|3269|histamine receptor H1##AK292157|HRH1|3269|histamine receptor H1##AK312879|HRH1|3269|histamine receptor H1##NM_001098211|HRH1|3269|histamine receptor H1	0.999565	CTCF.p2:-7:1.000
chr3	148673394	148673521	reg1016413.p1	8.497	+	NM_001870 AK313628 BC012613 DQ892805 DQ896052 CU680374 M27717	-90389	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	-127859	+	NM_032049	-225491	+	TSC_hg19_v1_chr3_+_148709140 NM_001184720 NM_001184721 NM_004130	35710	+	TSC_hg19_v1_chr3_+_148709326 AK299962 BC000033 X79537 AK312283 AF087942 U44131	35878	+	AB209052 EU446704 TSC_hg19_v1_chr3_-_148804298 AK291231 L34673 BC015498 BC005260 BC044659 BC014326 BC030976 NM_003071 NM_139048	130805	-	NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)##AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)##BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)##DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)##DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)##M27717|CPA3|1359|carboxypeptidase A3 (mast cell)##NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_001184720|GYG1|2992|glycogenin 1##NM_001184721|GYG1|2992|glycogenin 1##NM_004130|GYG1|2992|glycogenin 1##AK299962|GYG1|2992|glycogenin 1##BC000033|GYG1|2992|glycogenin 1##X79537|GYG1|2992|glycogenin 1##AK312283|GYG1|2992|glycogenin 1##AF087942|GYG1|2992|glycogenin 1##U44131|GYG1|2992|glycogenin 1##AB209052|HLTF|6596|helicase-like transcription factor##EU446704|HLTF|6596|helicase-like transcription factor##AK291231|HLTF|6596|helicase-like transcription factor##L34673|HLTF|6596|helicase-like transcription factor##BC015498|HLTF|6596|helicase-like transcription factor##BC005260|HLTF|6596|helicase-like transcription factor##BC044659|HLTF|6596|helicase-like transcription factor##BC014326|HLTF|6596|helicase-like transcription factor##BC030976|HLTF|6596|helicase-like transcription factor##NM_003071|HLTF|6596|helicase-like transcription factor##NM_139048|HLTF|6596|helicase-like transcription factor	0.985942	CTCF.p2:-6:0.986
chr5	156755547	156755665	reg1015778.p1	8.497	+	BC011762 BC021008 NM_014376	-59250	+	TSC_hg19_v1_chr5_+_156693105 AL136549 NM_001037333 AK294220 AK295865 AK297401 AK303702 AB032994 AF160973 NM_001037332	-62354	+	BC094701 AB209622 D13720 NM_005546 BC109077 BC109078 AK312846 AK303609 AB590549	-147689	+	AK289701 BC022570 NM_001001343	17094	-	TSC_hg19_v1_chr5_+_156820161 AK172724	64582	+	AK296972 NM_001099287 NM_001172292	131420	+	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB209622|ITK|3702|IL2-inducible T-cell kinase##D13720|ITK|3702|IL2-inducible T-cell kinase##NM_005546|ITK|3702|IL2-inducible T-cell kinase##BC109077|ITK|3702|IL2-inducible T-cell kinase##BC109078|ITK|3702|IL2-inducible T-cell kinase##AK312846|ITK|3702|IL2-inducible T-cell kinase##AK303609|ITK|3702|IL2-inducible T-cell kinase##AK289701|FNDC9|408263|fibronectin type III domain containing 9##BC022570|FNDC9|408263|fibronectin type III domain containing 9##NM_001001343|FNDC9|408263|fibronectin type III domain containing 9##AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK296972|NIPAL4|348938|NIPA-like domain containing 4##NM_001099287|NIPAL4|348938|NIPA-like domain containing 4##NM_001172292|NIPAL4|348938|NIPA-like domain containing 4	0.711498	CTCF.p2:-4:0.711
chr5	59882269	59882391	reg1014843.p2	8.497	+	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	-98290	+	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	-98426	-	NM_001104631	-692710	-	TSC_hg19_v1_chr5_-_59995928 AF490257	113586	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	113635	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	257741	-	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF490257|DEPDC1B|55789|DEP domain containing 1B##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7	0.881558	CTCF.p2:3:0.882
chr1	10574615	10574728	reg1014975.p2	8.496	+	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-39660	+	TSC_hg19_v1_chr1_-_10532605 NM_004401 NM_213566	-42049	-	TSC_hg19_v1_chr1_-_10532555 AB590590 BT006980 CU675773 BC000037 AF103799 AF087573 BC007721 AK313317 AK222546 U91985 BC007112	-42116	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	179880	-	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	282034	-	NM_001170754	467422	-	AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_004401|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##NM_213566|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BT006980|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC000037|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF103799|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF087573|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007721|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK313317|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK222546|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##U91985|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007112|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127	0.0	
chr18	57663739	57663856	reg1014267.p1	8.496	+	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-96568	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-299147	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	-299206	-	AK314130 NM_005912	376203	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1493977	+	AK096495 NM_173557	1896506	-	NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152	0.985418	CTCF.p2:2:0.985
chr2	198033476	198033597	reg1015812.p1	8.496	+	AB128038 AB527353 TSC_hg19_v1_chr2_-_197791382 BX648642 AK022439 NM_024989 BC040517	-242092	-	BC137150 BC137151 AY358249 NM_213608	-358599	-	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	-369123	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	141846	-	TSC_hg19_v1_chr2_-_198175459 BC063622	141937	-	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	141983	-	AB128038|PGAP1|80055|post-GPI attachment to proteins 1##BX648642|PGAP1|80055|post-GPI attachment to proteins 1##AK022439|PGAP1|80055|post-GPI attachment to proteins 1##NM_024989|PGAP1|80055|post-GPI attachment to proteins 1##BC040517|PGAP1|80055|post-GPI attachment to proteins 1##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK124039|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44	0.724517	CTCF.p2:15:0.725
chr5	28345028	28345172	reg1015218.p1	8.496	+	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	-872697	+	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	-1306429	-	NM_006727	-3700016	-	NM_004932 TSC_hg19_v1_chr5_+_31193792 AK291290	2848696	+	TSC_hg19_v1_chr5_+_31193875 BC000019 AK024238	2848777	+	TSC_hg19_v1_chr5_-_31532201 AK308093 AF189011 BC054003 BX647724 NM_001100412 NM_013235	3187122	-	BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK308093|DROSHA|29102|drosha, ribonuclease type III##AF189011|DROSHA|29102|drosha, ribonuclease type III##BC054003|DROSHA|29102|drosha, ribonuclease type III##BX647724|DROSHA|29102|drosha, ribonuclease type III##NM_001100412|DROSHA|29102|drosha, ribonuclease type III##NM_013235|DROSHA|29102|drosha, ribonuclease type III	0.992919	CTCF.p2:5:0.993
chr11	87433772	87433876	reg1012742.p1	8.494	+	AK024853 TSC_hg19_v1_chr11_+_87032449	-401382	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	-684846	+	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	-767436	-	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	474768	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	637043	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	637078	-	AK024853|TMEM135|65084|transmembrane protein 135##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C	0.998501	CTCF.p2:5:0.999
chr18	9771575	9771753	reg1016764.p2	8.494	+	TSC_hg19_v1_chr18_+_9708323 U59877 U57091 AK223505 DQ892578 DQ895794 AF498957 BT020027 BT020028 CR407659	-63301	+	TSC_hg19_v1_chr18_+_9708299 BC001148	-63362	+	AK314809 TSC_hg19_v1_chr18_+_9708269	-63394	+	NM_001098529 NM_032243 AK303045	114078	+	NM_003574 NM_194434 TSC_hg19_v1_chr18_+_9913982	142307	+	TSC_hg19_v1_chr18_+_9914012 AK315577	142343	+	U59877|RAB31|11031|RAB31, member RAS oncogene family##U57091|RAB31|11031|RAB31, member RAS oncogene family##AK223505|RAB31|11031|RAB31, member RAS oncogene family##DQ892578|RAB31|11031|RAB31, member RAS oncogene family##DQ895794|RAB31|11031|RAB31, member RAS oncogene family##AF498957|RAB31|11031|RAB31, member RAS oncogene family##BT020027|RAB31|11031|RAB31, member RAS oncogene family##BT020028|RAB31|11031|RAB31, member RAS oncogene family##CR407659|RAB31|11031|RAB31, member RAS oncogene family##BC001148|RAB31|11031|RAB31, member RAS oncogene family##AK314809|RAB31|11031|RAB31, member RAS oncogene family##NM_001098529|TXNDC2|84203|thioredoxin domain containing 2 (spermatozoa)##NM_032243|TXNDC2|84203|thioredoxin domain containing 2 (spermatozoa)##AK303045|TXNDC2|84203|thioredoxin domain containing 2 (spermatozoa)##NM_003574|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##NM_194434|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AK315577|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa	0.016998	
chr20	5107439	5107550	reg1003491.p2	8.494	+	AK300558 AK311014 NM_002592	-268	-	CR536501 CR541799 AB464071 DQ891403 DQ894581 M15796 TSC_hg19_v1_chr20_-_5100605 BC000491 BC062439 D28458 AK313286 M29310 NM_182649	-6939	-	TSC_hg19_v1_chr20_-_5093685 AY359115 BC015113 AK055700 BC110408 BC011990 BC009768 BC009770 AF161392 BC009769 AK315606 BC066317 AK309823 BC070212 NM_001009923 NM_001009924 NM_001009925 NM_014145	-13879	-	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	28	+	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	201	+	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	187542	-	AK300558|PCNA|5111|proliferating cell nuclear antigen##NM_002592|PCNA|5111|proliferating cell nuclear antigen##CR536501|PCNA|5111|proliferating cell nuclear antigen##CR541799|PCNA|5111|proliferating cell nuclear antigen##DQ891403|PCNA|5111|proliferating cell nuclear antigen##DQ894581|PCNA|5111|proliferating cell nuclear antigen##M15796|PCNA|5111|proliferating cell nuclear antigen##BC000491|PCNA|5111|proliferating cell nuclear antigen##BC062439|PCNA|5111|proliferating cell nuclear antigen##D28458|PCNA|5111|proliferating cell nuclear antigen##AK313286|PCNA|5111|proliferating cell nuclear antigen##NM_182649|PCNA|5111|proliferating cell nuclear antigen##AY359115|C20orf30|29058|chromosome 20 open reading frame 30##BC015113|C20orf30|29058|chromosome 20 open reading frame 30##AK055700|C20orf30|29058|chromosome 20 open reading frame 30##BC110408|C20orf30|29058|chromosome 20 open reading frame 30##BC011990|C20orf30|29058|chromosome 20 open reading frame 30##BC009768|C20orf30|29058|chromosome 20 open reading frame 30##BC009770|C20orf30|29058|chromosome 20 open reading frame 30##AF161392|C20orf30|29058|chromosome 20 open reading frame 30##BC009769|C20orf30|29058|chromosome 20 open reading frame 30##AK315606|C20orf30|29058|chromosome 20 open reading frame 30##BC066317|C20orf30|29058|chromosome 20 open reading frame 30##AK309823|C20orf30|29058|chromosome 20 open reading frame 30##BC070212|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009923|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009924|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009925|C20orf30|29058|chromosome 20 open reading frame 30##NM_014145|C20orf30|29058|chromosome 20 open reading frame 30##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2	0.060998	
chr1	25814161	25814322	reg1015174.p1	8.493	+	TSC_hg19_v1_chr1_+_25757387 AK311472 NM_018202 AY845015 BC007687 AK001609 AY845035 AY845036 BC032427 BC020801	-56756	+	AB018644 AB018645 AB030388 AB049753 AF056965 AF177938 AM295498 AM295506 DQ178642 DQ266353 DQ266400 DQ322275 FR691748 FR691750 GU474431 GU563377 GU810838 HE572747 JF436968 S57967 X63096 X63095 AY603478 X63098 Z97026 BC075081 M34015 AF510065 AF510066 AF510067 AF510068 X54534 NM_020485 NM_138616 NM_138617 NM_138618 BC139905	-66901	-	TSC_hg19_v1_chr1_+_25664821 NM_014313 AK311092 AF087880 AL136627 AK299180 AK311355 AK312588 AY358650 AY071927 BC007341 BC066908 AF081282	-149407	+	TSC_hg19_v1_chr1_+_25870097 AK091219 NM_015627	55850	+	TSC_hg19_v1_chr1_+_25870146 BC029770 AL117654 AB528624	55923	+	AF261655 NM_020379	129717	+	AK311472|TMEM57|55219|transmembrane protein 57##NM_018202|TMEM57|55219|transmembrane protein 57##AY845015|TMEM57|55219|transmembrane protein 57##BC007687|TMEM57|55219|transmembrane protein 57##AK001609|TMEM57|55219|transmembrane protein 57##AY845035|TMEM57|55219|transmembrane protein 57##AY845036|TMEM57|55219|transmembrane protein 57##BC032427|TMEM57|55219|transmembrane protein 57##BC020801|TMEM57|55219|transmembrane protein 57##AB018644|RHCE|6006|Rh blood group, CcEe antigens##AB018645|RHCE|6006|Rh blood group, CcEe antigens##AB030388|RHCE|6006|Rh blood group, CcEe antigens##AB049753|RHCE|6006|Rh blood group, CcEe antigens##AF056965|RHCE|6006|Rh blood group, CcEe antigens##AF177938|RHD|6007|Rh blood group, D antigen##AM295498|RHCE|6006|Rh blood group, CcEe antigens##AM295506|RHCE|6006|Rh blood group, CcEe antigens##DQ178642|RHCE|6006|Rh blood group, CcEe antigens##DQ266353|RHCE|6006|Rh blood group, CcEe antigens##DQ266400|RHCE|6006|Rh blood group, CcEe antigens##DQ322275|RHCE|6006|Rh blood group, CcEe antigens##FR691748|RHCE|6006|Rh blood group, CcEe antigens##FR691750|RHCE|6006|Rh blood group, CcEe antigens##GU474431|RHCE|6006|Rh blood group, CcEe antigens##GU563377|RHCE|6006|Rh blood group, CcEe antigens##GU810838|RHCE|6006|Rh blood group, CcEe antigens##S57967|RHCE|6006|Rh blood group, CcEe antigens##X63096|RHCE|6006|Rh blood group, CcEe antigens##X63095|RHCE|6006|Rh blood group, CcEe antigens##AY603478|RHCE|6006|Rh blood group, CcEe antigens##X63098|RHCE|6006|Rh blood group, CcEe antigens##Z97026|RHD|6007|Rh blood group, D antigen##BC075081|RHCE|6006|Rh blood group, CcEe antigens##M34015|RHCE|6006|Rh blood group, CcEe antigens##AF510065|RHCE|6006|Rh blood group, CcEe antigens##AF510066|RHCE|6006|Rh blood group, CcEe antigens##AF510067|RHCE|6006|Rh blood group, CcEe antigens##AF510068|RHCE|6006|Rh blood group, CcEe antigens##X54534|RHCE|6006|Rh blood group, CcEe antigens##NM_020485|RHCE|6006|Rh blood group, CcEe antigens##NM_138616|RHCE|6006|Rh blood group, CcEe antigens##NM_138617|RHCE|6006|Rh blood group, CcEe antigens##NM_138618|RHCE|6006|Rh blood group, CcEe antigens##BC139905|RHCE|6006|Rh blood group, CcEe antigens##NM_014313|TMEM50A|23585|transmembrane protein 50A##AK311092|TMEM50A|23585|transmembrane protein 50A##AF087880|TMEM50A|23585|transmembrane protein 50A##AL136627|TMEM50A|23585|transmembrane protein 50A##AK299180|TMEM50A|23585|transmembrane protein 50A##AK311355|TMEM50A|23585|transmembrane protein 50A##AK312588|TMEM50A|23585|transmembrane protein 50A##AY358650|TMEM50A|23585|transmembrane protein 50A##AY071927|TMEM50A|23585|transmembrane protein 50A##BC007341|TMEM50A|23585|transmembrane protein 50A##BC066908|TMEM50A|23585|transmembrane protein 50A##AF081282|TMEM50A|23585|transmembrane protein 50A##AK091219|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##NM_015627|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##BC029770|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AL117654|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1	0.999666	CTCF.p2:10:1.000
chr15	35811884	35812002	reg1016789.p1	8.493	+	NM_014106 TSC_hg19_v1_chr15_-_35280498	-531431	-	TSC_hg19_v1_chr15_-_35280489 BC071603 AK291438	-531489	-	AB384497 AK291615 BC127111 BC127112 TSC_hg19_v1_chr15_-_35261899 AB011132 AK315815 BX647820 EF553519 NM_014691	-550016	-	CU688170 TSC_hg19_v1_chr15_-_35838365 BC066652 AK094007 AL833427 AX748407 AK125017 NM_001141972 NM_080650	26443	-	TSC_hg19_v1_chr15_+_36871914 NM_001130010 AK026504 BC006254	1059956	+	NM_032499	1120862	+	NM_014106|ZNF770|54989|zinc finger protein 770##BC071603|ZNF770|54989|zinc finger protein 770##AK291438|ZNF770|54989|zinc finger protein 770##AK291615|AQR|9716|aquarius homolog (mouse)##BC127111|AQR|9716|aquarius homolog (mouse)##BC127112|AQR|9716|aquarius homolog (mouse)##AB011132|AQR|9716|aquarius homolog (mouse)##AK315815|AQR|9716|aquarius homolog (mouse)##BX647820|AQR|9716|aquarius homolog (mouse)##EF553519|AQR|9716|aquarius homolog (mouse)##NM_014691|AQR|9716|aquarius homolog (mouse)##BC066652|ATPBD4|89978|ATP binding domain 4##AK094007|ATPBD4|89978|ATP binding domain 4##AL833427|ATPBD4|89978|ATP binding domain 4##AK125017|ATPBD4|89978|ATP binding domain 4##NM_001141972|ATPBD4|89978|ATP binding domain 4##NM_080650|ATPBD4|89978|ATP binding domain 4##NM_001130010|C15orf41|84529|chromosome 15 open reading frame 41##AK026504|C15orf41|84529|chromosome 15 open reading frame 41##BC006254|C15orf41|84529|chromosome 15 open reading frame 41##NM_032499|C15orf41|84529|chromosome 15 open reading frame 41	0.034831	
chr3	135614078	135614181	reg1014507.p1	8.493	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-1099828	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-1099978	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-1244284	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	70402	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	70491	+	NM_181897 AK316258 L12146	127489	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.999273	CTCF.p2:19:0.999
chr6	123637996	123638110	reg1015452.p1	8.493	+	BC101377 BC101376 NM_001010852	-320473	+	TSC_hg19_v1_chr6_+_123317379 AK295158	-320670	+	TSC_hg19_v1_chr6_+_123110402 AK000184 BC018999 BC066591 AK301365 DQ892207 DQ895402 CU676352	-527636	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	320036	-	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	487151	+	AK093417 AX748113 BC026087 NM_152553	1666458	+	BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##AK295158|CLVS2|134829|clavesin 2##AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217	0.983796	CTCF.p2:19:0.984
chr11	70313711	70313848	reg1016956.p1	8.492	+	TSC_hg19_v1_chr11_+_70244653 NM_001184740 NM_005231 NM_138565 AK222613 AK291097 BC033889 BC008799 M98343	-69126	+	TSC_hg19_v1_chr11_-_70244476 AK125463	-69264	-	D49354 TSC_hg19_v1_chr11_+_70194450	-119358	+	AF141901 BC114484 BC113876 TSC_hg19_v1_chr11_-_70507895	194088	-	TSC_hg19_v1_chr11_-_70507919 AB208027 NM_133266	194139	-	BC093885 BC112097 BC143389 TSC_hg19_v1_chr11_-_70507947	194171	-	NM_001184740|CTTN|2017|cortactin##NM_005231|CTTN|2017|cortactin##NM_138565|CTTN|2017|cortactin##AK222613|CTTN|2017|cortactin##AK291097|CTTN|2017|cortactin##BC033889|CTTN|2017|cortactin##BC008799|CTTN|2017|cortactin##M98343|CTTN|2017|cortactin##D49354|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##AF141901|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC114484|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC113876|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AB208027|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##NM_133266|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC093885|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC112097|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC143389|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2	0.971652	CTCF.p2:4:0.972
chr15	65931065	65931194	reg1016437.p1	8.492	+	AF062922 NM_004727	-16860	+	BC012630 TSC_hg19_v1_chr15_+_65903706 AB014602 BC029407 AK304006	-27474	+	AL136662 TSC_hg19_v1_chr15_-_65903462 BC007991 AK296134 AK027475 AK301033 AK301742 AK310857 AK301222 AK293207 NM_001207058 NM_001207059	-27613	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	153344	-	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	153464	-	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	230718	+	AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##BC012630|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##AB014602|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##BC029407|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##AK304006|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##AL136662|C15orf44|81556|chromosome 15 open reading frame 44##BC007991|C15orf44|81556|chromosome 15 open reading frame 44##AK296134|C15orf44|81556|chromosome 15 open reading frame 44##AK027475|C15orf44|81556|chromosome 15 open reading frame 44##AK301033|C15orf44|81556|chromosome 15 open reading frame 44##AK301742|C15orf44|81556|chromosome 15 open reading frame 44##AK310857|C15orf44|81556|chromosome 15 open reading frame 44##AK301222|C15orf44|81556|chromosome 15 open reading frame 44##AK293207|C15orf44|81556|chromosome 15 open reading frame 44##NM_001207058|C15orf44|81556|chromosome 15 open reading frame 44##NM_001207059|C15orf44|81556|chromosome 15 open reading frame 44##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family	0.997095	CTCF.p2:-12:0.997
chr9	103200262	103200377	reg1018106.p1	8.492	+	NM_001198806	-8524	+	NM_001198807 NM_080655 TSC_hg19_v1_chr9_+_103189545 AK314924 BC008993 NM_001198805	-10717	+	BC042955 TSC_hg19_v1_chr9_+_103115352 AK056351	-84959	+	NM_001198812 AY598327	3884	+	TSC_hg19_v1_chr9_+_103235495 NM_003692	35185	+	TSC_hg19_v1_chr9_+_103235637 BC035056 DQ891732 DQ894909	35410	+	NM_001198806|C9orf30|91283|chromosome 9 open reading frame 30##NM_001198807|C9orf30|91283|chromosome 9 open reading frame 30##NM_080655|C9orf30|91283|chromosome 9 open reading frame 30##AK314924|C9orf30|91283|chromosome 9 open reading frame 30##BC008993|C9orf30|91283|chromosome 9 open reading frame 30##NM_001198805|C9orf30|91283|chromosome 9 open reading frame 30##NM_001198812|C9orf30-TMEFF1|100526694|C9orf30-TMEFF1 readthrough##AY598327|C9orf30|91283|chromosome 9 open reading frame 30##NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1	0.99272	CTCF.p2:15:0.993
chr14	39484723	39484836	reg1017755.p1	8.491	+	AY358395 BX248017 NM_175060	-759223	-	AY573061 BC031567 TSC_hg19_v1_chr14_-_38725270 AY606132	-759495	-	AB384936 DQ893328 DQ896644 TSC_hg19_v1_chr14_+_38678642	-806160	+	AK293944 TSC_hg19_v1_chr14_-_39572386 AK312259 X97064	87565	-	TSC_hg19_v1_chr14_-_39572440 AK299862 BC036649 NM_006364 AK303485	87654	-	AF027150 NM_001009182 NM_001009183 NM_003616 BC028095 BC104968 AK313947 AB037701 AB037702 AB037703	98688	+	AY358395|CLEC14A|161198|C-type lectin domain family 14, member A##BX248017|CLEC14A|161198|C-type lectin domain family 14, member A##NM_175060|CLEC14A|161198|C-type lectin domain family 14, member A##AY573061|CLEC14A|161198|C-type lectin domain family 14, member A##BC031567|CLEC14A|161198|C-type lectin domain family 14, member A##AY606132|CLEC14A|161198|C-type lectin domain family 14, member A##DQ893328|SSTR1|6751|somatostatin receptor 1##DQ896644|SSTR1|6751|somatostatin receptor 1##AK293944|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK312259|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##X97064|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK299862|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##BC036649|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##NM_006364|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK303485|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AF027150|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_001009182|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_001009183|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_003616|GEMIN2|8487|gem (nuclear organelle) associated protein 2##BC028095|GEMIN2|8487|gem (nuclear organelle) associated protein 2##BC104968|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AK313947|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037701|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037702|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037703|GEMIN2|8487|gem (nuclear organelle) associated protein 2	0.029262	
chr10	56851615	56851747	reg1016782.p1	8.490	+	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	-290683	-	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-2320255	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-2777566	+	NM_001190478 TSC_hg19_v1_chr10_+_57358800	507093	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	1269333	-	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	1269345	-	AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor	0.971071	CTCF.p2:-11:0.971
chr11	64068584	64068690	reg1015227.p1	8.490	+	AL117564 NM_001039496 AM392988 AB590987	-766	+	TSC_hg19_v1_chr11_+_64058772 AK309443 NM_033310 BC067791 AF259500 AK296021	-9806	+	AJ250392 NM_001170880 NM_020155	-15056	+	TSC_hg19_v1_chr11_+_64073040 L38487 NM_004451 BC063795 BC073956	4431	+	TSC_hg19_v1_chr11_-_64085009 AK312050 DQ892261 DQ895463 BC105294 BC029482 BC017172 AF161501 AF229068 NM_016404	16384	-	BC110983 NM_012094 NM_181651 NM_181652 TSC_hg19_v1_chr11_+_64085600 AF197952	16942	+	AL117564|C11orf20|25858|chromosome 11 open reading frame 20##NM_001039496|C11orf20|25858|chromosome 11 open reading frame 20##AM392988|C11orf20|25858|chromosome 11 open reading frame 20##AK309443|KCNK4|50801|potassium channel, subfamily K, member 4##NM_033310|KCNK4|50801|potassium channel, subfamily K, member 4##BC067791|KCNK4|50801|potassium channel, subfamily K, member 4##AF259500|KCNK4|50801|potassium channel, subfamily K, member 4##AK296021|KCNK4|50801|potassium channel, subfamily K, member 4##AJ250392|GPR137|56834|G protein-coupled receptor 137##NM_001170880|GPR137|56834|G protein-coupled receptor 137##NM_020155|GPR137|56834|G protein-coupled receptor 137##L38487|ESRRA|2101|estrogen-related receptor alpha##NM_004451|ESRRA|2101|estrogen-related receptor alpha##BC063795|ESRRA|2101|estrogen-related receptor alpha##BC073956|ESRRA|2101|estrogen-related receptor alpha##AK312050|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ892261|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ895463|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC105294|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC029482|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC017172|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF161501|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF229068|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##NM_016404|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC110983|PRDX5|25824|peroxiredoxin 5##NM_012094|PRDX5|25824|peroxiredoxin 5##NM_181651|PRDX5|25824|peroxiredoxin 5##NM_181652|PRDX5|25824|peroxiredoxin 5##AF197952|PRDX5|25824|peroxiredoxin 5	0.736874	CTCF.p2:3:0.737
chr1	201354553	201354665	reg1014678.p1	8.490	+	NM_000364 NM_001001430 NM_001001431 NM_001001432 AK125236 TSC_hg19_v1_chr1_-_201346809 AK290621	-7763	-	TSC_hg19_v1_chr1_-_201346783 L40162 AY277394 X79861 BC002653	-7821	-	TSC_hg19_v1_chr1_-_201342319 X79855 X79856 X79858 CU678094 S64668 X74819 X79859	-12229	-	DQ893656 DQ895808 TSC_hg19_v1_chr1_-_201368483 AK310917 AK313388	13857	-	BX647307 U42408 TSC_hg19_v1_chr1_-_201368661 BC009742 NM_005558	14036	-	TSC_hg19_v1_chr1_-_201368726 BC071890	14132	-	NM_000364|TNNT2|7139|troponin T type 2 (cardiac)##NM_001001430|TNNT2|7139|troponin T type 2 (cardiac)##NM_001001431|TNNT2|7139|troponin T type 2 (cardiac)##NM_001001432|TNNT2|7139|troponin T type 2 (cardiac)##AK125236|TNNT2|7139|troponin T type 2 (cardiac)##AK290621|TNNT2|7139|troponin T type 2 (cardiac)##L40162|TNNT2|7139|troponin T type 2 (cardiac)##AY277394|TNNT2|7139|troponin T type 2 (cardiac)##X79861|TNNT2|7139|troponin T type 2 (cardiac)##BC002653|TNNT2|7139|troponin T type 2 (cardiac)##X79855|TNNT2|7139|troponin T type 2 (cardiac)##X79856|TNNT2|7139|troponin T type 2 (cardiac)##X79858|TNNT2|7139|troponin T type 2 (cardiac)##S64668|TNNT2|7139|troponin T type 2 (cardiac)##X74819|TNNT2|7139|troponin T type 2 (cardiac)##X79859|TNNT2|7139|troponin T type 2 (cardiac)##DQ893656|LAD1|3898|ladinin 1##DQ895808|LAD1|3898|ladinin 1##AK310917|LAD1|3898|ladinin 1##AK313388|LAD1|3898|ladinin 1##BX647307|LAD1|3898|ladinin 1##U42408|LAD1|3898|ladinin 1##BC009742|LAD1|3898|ladinin 1##NM_005558|LAD1|3898|ladinin 1##BC071890|LAD1|3898|ladinin 1	0.85613	CTCF.p2:-2:0.856
chr5	154325381	154325496	reg1014401.p1	8.490	+	TSC_hg19_v1_chr5_+_154320654 NM_001014990 NM_014180 AK000601 AK302784 CR933679 BC012565 AF161507 CU680362	-4789	+	TSC_hg19_v1_chr5_-_154317760 AB385260 AY063750 AK022748 BC113614 BC143724 BC036894 BC040931 AK074066 AK315101 NM_001252156 NM_015465	-7722	-	TSC_hg19_v1_chr5_+_154238213 AK297381 BC017366	-87196	+	NM_001099293 AK302388	67848	+	BX537948 NM_000337 NM_001128209 NM_172244	1428322	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	1428735	+	NM_001014990|MRPL22|29093|mitochondrial ribosomal protein L22##NM_014180|MRPL22|29093|mitochondrial ribosomal protein L22##AK000601|MRPL22|29093|mitochondrial ribosomal protein L22##AK302784|MRPL22|29093|mitochondrial ribosomal protein L22##CR933679|MRPL22|29093|mitochondrial ribosomal protein L22##BC012565|MRPL22|29093|mitochondrial ribosomal protein L22##AF161507|MRPL22|29093|mitochondrial ribosomal protein L22##AY063750|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK022748|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC113614|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC143724|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC036894|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC040931|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK074066|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK315101|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_001252156|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_015465|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK297381|CNOT8|9337|CCR4-NOT transcription complex, subunit 8##BC017366|CNOT8|9337|CCR4-NOT transcription complex, subunit 8##NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	0.918466	CTCF.p2:4:0.918
chrX	150657348	150657430	reg1014531.p1	8.490	+	TSC_hg19_v1_chrX_+_150565705 BC103701 BC103702 BC105693 BC105694 AL833596 BC110800 AM392666 AB528749	-91654	+	TSC_hg19_v1_chrX_+_150565686 AK096835	-91709	+	TSC_hg19_v1_chrX_+_150565667 NM_001017980	-91727	+	NM_173493 AK097552 BC040301 AY270020	74714	+	NM_024082	206340	+	BC022064 AF249872 NM_033085 AK057369 AB528542 AM393498 CU692478 DQ892418 DQ895632	227159	+	BC103701|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC103702|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC105693|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC105694|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AL833596|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC110800|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AM392666|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AK096835|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##NM_001017980|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##NM_173493|PASD1|139135|PAS domain containing 1##AK097552|PASD1|139135|PAS domain containing 1##BC040301|PASD1|139135|PAS domain containing 1##AY270020|PASD1|139135|PAS domain containing 1##NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)##BC022064|FATE1|89885|fetal and adult testis expressed 1##AF249872|FATE1|89885|fetal and adult testis expressed 1##NM_033085|FATE1|89885|fetal and adult testis expressed 1##AM393498|FATE1|89885|fetal and adult testis expressed 1##DQ892418|FATE1|89885|fetal and adult testis expressed 1##DQ895632|FATE1|89885|fetal and adult testis expressed 1	0.0	
chr1	120510749	120510863	reg1015613.p1	8.489	+	U77493 TSC_hg19_v1_chr1_-_120484245	-26567	-	BC028372 AY358734 AK292483 NM_021794	-71675	-	NM_001047980	-123028	-	AF308601 TSC_hg19_v1_chr1_-_120612027 AF315356	101223	-	TSC_hg19_v1_chr1_-_120612211 AK307843	101400	-	TSC_hg19_v1_chr1_-_120612272 BC071562	101460	-	U77493|NOTCH2|4853|notch 2##BC028372|ADAM30|11085|ADAM metallopeptidase domain 30##AY358734|ADAM30|11085|ADAM metallopeptidase domain 30##AK292483|ADAM30|11085|ADAM metallopeptidase domain 30##NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30##NM_001047980|NBPF7|343505|neuroblastoma breakpoint family, member 7##AF308601|NOTCH2|4853|notch 2##AF315356|NOTCH2|4853|notch 2##AK307843|NOTCH2|4853|notch 2##BC071562|NOTCH2|4853|notch 2	0.999526	CTCF.p2:1:1.000
chr5	142303847	142303967	reg1016199.p1	8.489	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-153599	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-153935	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-226336	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	478916	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	479199	-	BC015610 TSC_hg19_v1_chr5_-_142783214	479304	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.037967	
chr10	81227290	81227399	reg1012274.p1	8.488	+	TSC_hg19_v1_chr10_-_81205381 AK308876 AK075279 BC053564 BC039249 BC028617 NM_153367	-22084	-	TSC_hg19_v1_chr10_+_81107279 AB529152 CU678858 EU831447	-120057	+	BC013204 BC110299 TSC_hg19_v1_chr10_+_81107252	-120095	+	BC070048 NM_001099692	45012	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	92807	-	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	143360	+	AK308876|ZCCHC24|219654|zinc finger, CCHC domain containing 24##AK075279|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC053564|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC039249|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC028617|ZCCHC24|219654|zinc finger, CCHC domain containing 24##NM_153367|ZCCHC24|219654|zinc finger, CCHC domain containing 24##EU831447|PPIF|10105|peptidylprolyl isomerase F##BC013204|PPIF|10105|peptidylprolyl isomerase F##BC110299|PPIF|10105|peptidylprolyl isomerase F##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1	0.020626	
chr12	48583418	48583537	reg1015799.p2	8.487	+	NM_001013635 AK056003 BC036801 TSC_hg19_v1_chr12_+_48577419 BC049387	-6072	+	TSC_hg19_v1_chr12_-_48551274 AF464877 AK024908 BC001321 AK297013 AK289957 NM_024095	-32155	-	D21861 NM_001166687 NM_001166688 Y00698 BC000534 BC012799 BC013298 AB463168 CU674264 CU676868 BC007798	-66982	+	TSC_hg19_v1_chr12_+_48592139 AK125945 CR749551	8677	+	AB587540 NM_001004134 BC136757 BC136758	13644	-	AY302593 NM_181788 BC119787 BC118635	139311	+	NM_001013635|C12orf68|387856|chromosome 12 open reading frame 68##AK056003|C12orf68|387856|chromosome 12 open reading frame 68##BC036801|C12orf68|387856|chromosome 12 open reading frame 68##BC049387|C12orf68|387856|chromosome 12 open reading frame 68##AF464877|ASB8|140461|ankyrin repeat and SOCS box containing 8##AK024908|ASB8|140461|ankyrin repeat and SOCS box containing 8##BC001321|ASB8|140461|ankyrin repeat and SOCS box containing 8##AK297013|ASB8|140461|ankyrin repeat and SOCS box containing 8##AK289957|ASB8|140461|ankyrin repeat and SOCS box containing 8##NM_024095|ASB8|140461|ankyrin repeat and SOCS box containing 8##D21861|PFKM|5213|phosphofructokinase, muscle##NM_001166687|PFKM|5213|phosphofructokinase, muscle##NM_001166688|PFKM|5213|phosphofructokinase, muscle##Y00698|PFKM|5213|phosphofructokinase, muscle##BC000534|PFKM|5213|phosphofructokinase, muscle##BC012799|PFKM|5213|phosphofructokinase, muscle##BC013298|PFKM|5213|phosphofructokinase, muscle##BC007798|PFKM|5213|phosphofructokinase, muscle##AK125945|DKFZP779L1853|643162|uncharacterized LOC643162##CR749551|DKFZP779L1853|643162|uncharacterized LOC643162##NM_001004134|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1##BC136757|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1##BC136758|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1##AY302593|H1FNT|341567|H1 histone family, member N, testis-specific##NM_181788|H1FNT|341567|H1 histone family, member N, testis-specific##BC119787|H1FNT|341567|H1 histone family, member N, testis-specific##BC118635|H1FNT|341567|H1 histone family, member N, testis-specific	0.726188	CTCF.p2:6:0.726
chr16	49590518	49590665	reg1016873.p1	8.487	+	BC021181 BC021718 NM_144602 CU676858	-182763	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-274857	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	-275091	-	NM_015069	270326	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	468549	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	509302	+	BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##NM_015069|ZNF423|23090|zinc finger protein 423##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3	0.155487	
chr4	64429471	64429581	reg1016345.p1	8.487	+	NM_015236	-2066688	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-2362551	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-6452958	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	845570	-	AK307826 NM_004439 NM_182472	2106126	-	TSC_hg19_v1_chr4_-_66536182 AB209375	2106671	-	NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.320532	CTCF.p2:18:0.303
chr5	89735621	89735755	reg1014583.p1	8.487	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	-30149	-	AL833268 AL833274 NM_001131005 NM_001193347	-1535794	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1550424	+	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	34494	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	34890	-	NM_006467 AK295434 U93868	35014	+	BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)	0.986556	CTCF.p2:-8:0.987
chr1	193152309	193152426	reg1018229.p1	8.486	+	TSC_hg19_v1_chr1_+_193091308 BC007325 AF312865 AK314772 AB590625 CU688012 EU831787 EU831865 BC011808	-61011	+	TSC_hg19_v1_chr1_+_193091242 AK300929 BC065037	-61128	+	TSC_hg19_v1_chr1_+_193091197 AK026969	-61170	+	AF288390 BC022507 NM_003783	3365	-	EU251076 BC103947 BC103948 BC103949 BC103950 AY359444 NM_198503 BX647852 AK309729 TSC_hg19_v1_chr1_-_196577612	3425158	-	TSC_hg19_v1_chr1_-_196577676 AK131498	3425315	-	BC007325|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF312865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK314772|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831787|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK300929|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC065037|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK026969|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##EU251076|KCNT2|343450|potassium channel, subfamily T, member 2##BC103947|KCNT2|343450|potassium channel, subfamily T, member 2##BC103948|KCNT2|343450|potassium channel, subfamily T, member 2##BC103949|KCNT2|343450|potassium channel, subfamily T, member 2##BC103950|KCNT2|343450|potassium channel, subfamily T, member 2##AY359444|KCNT2|343450|potassium channel, subfamily T, member 2##NM_198503|KCNT2|343450|potassium channel, subfamily T, member 2##BX647852|KCNT2|343450|potassium channel, subfamily T, member 2##AK309729|KCNT2|343450|potassium channel, subfamily T, member 2##AK131498|KCNT2|343450|potassium channel, subfamily T, member 2	0.346546	CTCF.p2:-11:0.347
chr14	56958159	56958295	reg1015816.p4	8.486	+	TSC_hg19_v1_chr14_+_56585163 AF302502	-373053	+	TSC_hg19_v1_chr14_+_56585131 BC009476 NM_021255 AK315727	-373233	+	L25616 TSC_hg19_v1_chr14_+_56078737 AB527439	-879478	+	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	88318	+	NM_172337 AB593056	314136	-	AK314271 BC032579 NM_021728 AB593058	318917	-	AF302502|PELI2|57161|pellino homolog 2 (Drosophila)##BC009476|PELI2|57161|pellino homolog 2 (Drosophila)##NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)##AK315727|PELI2|57161|pellino homolog 2 (Drosophila)##L25616|KTN1|3895|kinectin 1 (kinesin receptor)##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101##NM_172337|OTX2|5015|orthodenticle homeobox 2##AB593056|OTX2|5015|orthodenticle homeobox 2##AK314271|OTX2|5015|orthodenticle homeobox 2##BC032579|OTX2|5015|orthodenticle homeobox 2##NM_021728|OTX2|5015|orthodenticle homeobox 2##AB593058|OTX2|5015|orthodenticle homeobox 2	0.993412	CTCF.p2:0:0.993
chr20	9448766	9448924	reg1016172.p1	8.486	+	NM_000933 AB384821	-160392	+	NM_182797 BC117458 BC143868	-250787	+	AK307482 TSC_hg19_v1_chr20_+_9049806	-399047	+	TSC_hg19_v1_chr20_+_9458460 AK057634	9668	+	TSC_hg19_v1_chr20_+_9494997 AK295336 AK316114 NM_001199897 NM_012261	46154	+	AL121740 BC050727 TSC_hg19_v1_chr20_+_9495326	46467	+	NM_000933|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##AK057634|PLCB4|5332|phospholipase C, beta 4##AK295336|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AK316114|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_001199897|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_012261|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AL121740|LAMP5|24141|lysosomal-associated membrane protein family, member 5##BC050727|LAMP5|24141|lysosomal-associated membrane protein family, member 5	0.092031	
chr9	116036793	116036955	reg1016247.p1	8.486	+	TSC_hg19_v1_chr9_+_115983867 AK129613 AK222866 AL831843 BC013611 BC061924	-53003	+	NM_001859 TSC_hg19_v1_chr9_+_115983846 U83460 AK292511	-53040	+	AB385371 TSC_hg19_v1_chr9_-_115983577 AK307498 AB014574 BC009609 AK303074 NM_015258	-53291	-	TSC_hg19_v1_chr9_-_116037689 AK307507	827	-	BC042534 BC066300 TSC_hg19_v1_chr9_-_116037865 NM_139286	971	-	NM_001244926 NM_004697 TSC_hg19_v1_chr9_+_116037937 AK225056 U82756	1057	+	AK129613|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1##AK222866|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1##AL831843|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1##BC013611|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1##BC061924|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1##NM_001859|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1##U83460|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1##AK292511|SLC31A1|1317|solute carrier family 31 (copper transporters), member 1##AK307498|FKBP15|23307|FK506 binding protein 15, 133kDa##AB014574|FKBP15|23307|FK506 binding protein 15, 133kDa##BC009609|FKBP15|23307|FK506 binding protein 15, 133kDa##AK303074|FKBP15|23307|FK506 binding protein 15, 133kDa##NM_015258|FKBP15|23307|FK506 binding protein 15, 133kDa##AK307507|FKBP15|23307|FK506 binding protein 15, 133kDa##BC042534|CDC26|246184|cell division cycle 26 homolog (S. cerevisiae)##BC066300|CDC26|246184|cell division cycle 26 homolog (S. cerevisiae)##NM_139286|CDC26|246184|cell division cycle 26 homolog (S. cerevisiae)##NM_001244926|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##NM_004697|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##AK225056|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##U82756|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)	0.952137	CTCF.p2:-2:0.952
chr11	32771238	32771351	reg1016722.p1	8.485	+	TSC_hg19_v1_chr11_+_32605376 AK131064 AK292139 AK304378 AK001768 AK300002 AF064603 BC051292 BC011937 BC019103 NM_006360 AK222564 AK307121 CU676384 AY769947 CR450300 DQ185042	-165896	+	TSC_hg19_v1_chr11_+_32605343 AK312512	-165954	+	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	-314225	-	BC146800 AK131470 NM_001008391 BC062749	44883	-	TSC_hg19_v1_chr11_+_32851476 BC010052 NM_024081 BC063393 AF326351	80256	+	TSC_hg19_v1_chr11_+_32914677 BC112935 NM_001076786	143281	+	AK131064|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK292139|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK304378|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK001768|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK300002|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AF064603|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC051292|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC011937|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC019103|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##NM_006360|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK222564|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK307121|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AY769947|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##CR450300|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##DQ185042|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK312512|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1##BC146800|CCDC73|493860|coiled-coil domain containing 73##AK131470|CCDC73|493860|coiled-coil domain containing 73##NM_001008391|CCDC73|493860|coiled-coil domain containing 73##BC062749|CCDC73|493860|coiled-coil domain containing 73##BC010052|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##NM_024081|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC063393|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##AF326351|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC112935|QSER1|79832|glutamine and serine rich 1##NM_001076786|QSER1|79832|glutamine and serine rich 1	0.89646	CTCF.p2:-8:0.896
chr17	62141244	62141357	reg1014477.p2	8.485	+	TSC_hg19_v1_chr17_-_62097985 AK295382 AK309953 NM_001099786 NM_001099787 NM_001099788 NM_001099789	-43318	-	NM_000873 TSC_hg19_v1_chr17_-_62084314	-56995	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	-65538	+	TSC_hg19_v1_chr17_-_62207401 AB385116 BC130405 BC130407	66098	-	AF059198 AB209869 TSC_hg19_v1_chr17_-_62207502 NM_001433 AK292403	66216	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	199286	-	AK295382|ICAM2|3384|intercellular adhesion molecule 2##NM_001099786|ICAM2|3384|intercellular adhesion molecule 2##NM_001099787|ICAM2|3384|intercellular adhesion molecule 2##NM_001099788|ICAM2|3384|intercellular adhesion molecule 2##NM_001099789|ICAM2|3384|intercellular adhesion molecule 2##NM_000873|ICAM2|3384|intercellular adhesion molecule 2##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##BC130405|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130407|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AF059198|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AB209869|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##NM_001433|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK292403|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2	0.974967	CTCF.p2:-3:0.975
chr9	28073410	28073519	reg1013928.p2	8.485	+	AK057806 JN681271 NM_145005	-499623	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-499993	-	TSC_hg19_v1_chr9_-_27529809 AL832572 BC033027 AK023266 NM_024761	-543814	-	AK056372 NM_152570	645838	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	4311126	+	TSC_hg19_v1_chr9_+_32384622 AK057904	4311163	+	AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##AL832572|MOB3B|79817|MOB kinase activator 3B##BC033027|MOB3B|79817|MOB kinase activator 3B##AK023266|MOB3B|79817|MOB kinase activator 3B##NM_024761|MOB3B|79817|MOB kinase activator 3B##AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble	0.983277	CTCF.p2:-4:0.983
chrX	51204025	51204155	reg1017836.p1	8.484	+	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	-128387	+	AF469196 NM_153183	-129008	+	BC117264 BC117266 NM_005448 BC069155 HQ258214	-550332	+	AB528198 AM392606 AK001490 TSC_hg19_v1_chrX_-_51239368	35242	-	BC009942 TSC_hg19_v1_chrX_-_51239444 NM_018159	35352	-	TSC_hg19_v1_chrX_+_51486493 NM_018094 AK225671 BC036077 AK298868 AK023155 AK001303	282421	+	AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AM392606|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK001490|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##BC009942|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018159|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018094|GSPT2|23708|G1 to S phase transition 2##BC036077|GSPT2|23708|G1 to S phase transition 2##AK298868|GSPT2|23708|G1 to S phase transition 2##AK023155|GSPT2|23708|G1 to S phase transition 2##AK001303|GSPT2|23708|G1 to S phase transition 2	0.922362	CTCF.p2:-12:0.922
chr12	11352652	11352783	reg1016624.p1	8.483	+	BC131742 NM_181429	-13175	-	TSC_hg19_v1_chr12_-_11324213 AK123548 BC071692 BC064553 AB593030 AB593028 BC031043 AB593029	-28525	-	NM_001097643	-65875	-	BC096209 BC096210 BC096211 BC096212 NM_006249	69923	-	BC130386 BC035362 K03207 NM_002723 BC128191	110643	-	BC044827 K03205 K03206 BC141917 K03204 NM_005039 NM_199353 NM_199354 AX772842	155799	-	BC131742|TAS2R42|353164|taste receptor, type 2, member 42##NM_181429|TAS2R42|353164|taste receptor, type 2, member 42##AK123548|TAS2R14|50840|taste receptor, type 2, member 14##BC071692|PRH1-PRR4|100533464|PRH1-PRR4 readthrough##BC064553|PRH1|5554|proline-rich protein HaeIII subfamily 1##BC031043|PRH1|5554|proline-rich protein HaeIII subfamily 1##NM_001097643|TAS2R30|259293|taste receptor, type 2, member 30##BC096209|PRB3|5544|proline-rich protein BstNI subfamily 3##BC096210|PRB3|5544|proline-rich protein BstNI subfamily 3##BC096211|PRB3|5544|proline-rich protein BstNI subfamily 3##BC096212|PRB3|5544|proline-rich protein BstNI subfamily 3##NM_006249|PRB3|5544|proline-rich protein BstNI subfamily 3##BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4##BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4##K03207|PRB4|5545|proline-rich protein BstNI subfamily 4##NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4##BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4##BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##K03205|PRB1|5542|proline-rich protein BstNI subfamily 1##K03206|PRB1|5542|proline-rich protein BstNI subfamily 1##BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1##K03204|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1	0.988584	CTCF.p2:16:0.989
chr2	105028987	105029106	reg1017848.p1	8.483	+	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	-1650464	+	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	-1675664	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	-1675713	-	TSC_hg19_v1_chr2_-_105467912 AK096498	438870	-	TSC_hg19_v1_chr2_+_105471877 NM_006236	442852	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	625468	+	CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182##AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##NM_006236|POU3F3|5455|POU class 3 homeobox 3##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9	0.997877	CTCF.p2:0:0.998
chr15	55732016	55732123	reg1017010.p1	8.481	+	NM_001198784 AK130862 BX648577	-31274	+	AK292795 BC039871 TSC_hg19_v1_chr15_-_55700478 BC027621 AB033080 AK022459 BC015203 NM_004748 NM_001204450 NM_001204451 NM_020739	-31488	-	TSC_hg19_v1_chr15_-_55652777 AF011794	-79263	-	AF337549 NM_001033559 NM_001033560 NM_130810	68362	-	EF625686 TSC_hg19_v1_chr15_-_55880544	148463	-	AF457207 NM_015617	148980	-	NM_001198784|FLJ27352|145788|uncharacterized LOC145788##AK130862|FLJ27352|145788|uncharacterized LOC145788##BX648577|FLJ27352|145788|uncharacterized LOC145788##AK292795|CCPG1|9236|cell cycle progression 1##BC039871|CCPG1|9236|cell cycle progression 1##BC027621|CCPG1|9236|cell cycle progression 1##AB033080|CCPG1|9236|cell cycle progression 1##AK022459|CCPG1|9236|cell cycle progression 1##BC015203|CCPG1|9236|cell cycle progression 1##NM_004748|CCPG1|9236|cell cycle progression 1##NM_001204450|CCPG1|9236|cell cycle progression 1##NM_001204451|CCPG1|9236|cell cycle progression 1##NM_020739|CCPG1|9236|cell cycle progression 1##AF011794|CCPG1|9236|cell cycle progression 1##AF337549|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001033559|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001033560|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_130810|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##EF625686|PYGO1|26108|pygopus homolog 1 (Drosophila)##AF457207|PYGO1|26108|pygopus homolog 1 (Drosophila)##NM_015617|PYGO1|26108|pygopus homolog 1 (Drosophila)	0.492795	CTCF.p2:-1:0.493
chr8	82424786	82424915	reg1013814.p2	8.481	+	AB590738 BT006809 CR456903 J02874 TSC_hg19_v1_chr8_-_82395472 BC003672 NM_001442	-29412	-	AB528797 NM_001080526	-51093	-	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	-65181	-	NM_001105281 EU733650 BC146973 BC146981	18730	-	AK300750 TSC_hg19_v1_chr8_-_82598565 AK312823 AK297078 BC008381 BC009565 AF042729 NM_001144878 NM_001144879 NM_005536	173702	-	AY825924 NM_001010893 BC136625 BC136631	182396	-	BT006809|FABP4|2167|fatty acid binding protein 4, adipocyte##CR456903|FABP4|2167|fatty acid binding protein 4, adipocyte##J02874|FABP4|2167|fatty acid binding protein 4, adipocyte##BC003672|FABP4|2167|fatty acid binding protein 4, adipocyte##NM_001442|FABP4|2167|fatty acid binding protein 4, adipocyte##NM_001080526|FABP9|646480|fatty acid binding protein 9, testis##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2##NM_001105281|FABP12|646486|fatty acid binding protein 12##EU733650|FABP12|646486|fatty acid binding protein 12##BC146973|FABP12|646486|fatty acid binding protein 12##BC146981|FABP12|646486|fatty acid binding protein 12##AK300750|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AK312823|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AK297078|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##BC008381|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##BC009565|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AF042729|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##NM_001144878|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##NM_001144879|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##NM_005536|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AY825924|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##NM_001010893|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136625|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136631|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5	0.79057	CTCF.p2:2:0.791
chr12	12798534	12798665	reg1016045.p1	8.480	+	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	-33716	+	TSC_hg19_v1_chr12_+_12764831 BC106052 AF039081 NM_001310 AK307202	-33804	+	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	-83199	-	AK096388 NM_006143	50521	-	TSC_hg19_v1_chr12_+_12870308 AK312461 NM_004064 BC001971 AK298335	71527	+	TSC_hg19_v1_chr12_+_12878853 NM_001130415 AK127712 BC042478 AM393383	80257	+	BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2##BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2##AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2##AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2##AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16##AK096388|GPR19|2842|G protein-coupled receptor 19##NM_006143|GPR19|2842|G protein-coupled receptor 19##AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_001130415|APOLD1|81575|apolipoprotein L domain containing 1##BC042478|APOLD1|81575|apolipoprotein L domain containing 1##AM393383|APOLD1|81575|apolipoprotein L domain containing 1	0.865951	CTCF.p2:-4:0.866
chr8	22144899	22145025	reg1016151.p1	8.480	+	AK292440 NM_001135721	-11883	+	AK315830 NM_018068 AK056418 AK291038 TSC_hg19_v1_chr8_+_22132830 AK315833 AK299068 BC025995 BC111751	-12110	+	TSC_hg19_v1_chr8_+_22102905 BC000516 BC003039 BC004484 AK295725 BC002603 CU678738 AF346574 AY092086 CR536509 CR541803	-42059	+	AK000397 TSC_hg19_v1_chr8_+_22210339	65364	+	TSC_hg19_v1_chr8_+_22224769 NM_001128431 NM_001135154 NM_015359	79809	+	TSC_hg19_v1_chr8_+_22224790 AK172810 BC015770 D31887	79883	+	AK292440|PIWIL2|55124|piwi-like 2 (Drosophila)##NM_001135721|PIWIL2|55124|piwi-like 2 (Drosophila)##AK315830|PIWIL2|55124|piwi-like 2 (Drosophila)##NM_018068|PIWIL2|55124|piwi-like 2 (Drosophila)##AK056418|PIWIL2|55124|piwi-like 2 (Drosophila)##AK291038|PIWIL2|55124|piwi-like 2 (Drosophila)##AK315833|PIWIL2|55124|piwi-like 2 (Drosophila)##AK299068|PIWIL2|55124|piwi-like 2 (Drosophila)##BC025995|PIWIL2|55124|piwi-like 2 (Drosophila)##BC111751|PIWIL2|55124|piwi-like 2 (Drosophila)##BC000516|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##BC003039|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##BC004484|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##AK295725|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##BC002603|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##AF346574|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##AY092086|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##CR536509|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##CR541803|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##AK000397|PIWIL2|55124|piwi-like 2 (Drosophila)##NM_001128431|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##NM_001135154|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##NM_015359|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##AK172810|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##BC015770|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##D31887|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14	0.457642	CTCF.p2:-23:0.458
chr16	57456379	57456507	reg1016853.p1	8.479	+	BC069107 NM_002987 BC112066 BC112068	-17748	+	TSC_hg19_v1_chr16_+_57406401 AK223351 AK313806 U84487 U91835 BC001163 BC016164 NM_002996 AB590256 DQ890704 DQ891871 DQ893888 DQ895059 CU674588 CR457426	-50004	+	AK222692 TSC_hg19_v1_chr16_+_57406382	-50058	+	BC036316 TSC_hg19_v1_chr16_-_57481298 AK074263 BC002568 AK292281 AL136613 BC071740 BC024196 AF248964 NM_020313 BC067303	24911	-	AK075438 NM_020312 TSC_hg19_v1_chr16_+_57481390 AK295793 BC064946 AK293585 BC029341 BC054340 AF161444 AK290627 AK303527 CU687976 EU832506 EU832587	24933	+	TSC_hg19_v1_chr16_+_57496563 NM_032940	40115	+	BC069107|CCL17|6361|chemokine (C-C motif) ligand 17##NM_002987|CCL17|6361|chemokine (C-C motif) ligand 17##BC112066|CCL17|6361|chemokine (C-C motif) ligand 17##BC112068|CCL17|6361|chemokine (C-C motif) ligand 17##AK223351|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK313806|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U84487|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U91835|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC001163|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC016164|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002996|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ890704|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ891871|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ893888|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ895059|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##CR457426|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK222692|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK075438|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_020312|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK295793|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC064946|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK293585|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC029341|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC054340|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AF161444|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK290627|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK303527|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832506|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832587|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	0.235265	CTCF.p2:8:0.235
chr3	87399899	87400009	reg1016679.p1	8.478	+	AB587506 L18781 X72215 X62429 D10216 NM_000306 NM_001122757	-74281	-	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	-123419	+	BC094780 TSC_hg19_v1_chr3_-_87040272	-359684	-	NM_000866	631771	+	BC052980 TSC_hg19_v1_chr3_-_88108150 AL117392 NM_001008390 NM_003663	708189	-	AF543494 NM_018293	788307	+	L18781|POU1F1|5449|POU class 1 homeobox 1##X72215|POU1F1|5449|POU class 1 homeobox 1##X62429|POU1F1|5449|POU class 1 homeobox 1##D10216|POU1F1|5449|POU class 1 homeobox 1##NM_000306|POU1F1|5449|POU class 1 homeobox 1##NM_001122757|POU1F1|5449|POU class 1 homeobox 1##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_000866|HTR1F|3355|5-hydroxytryptamine (serotonin) receptor 1F##BC052980|CGGBP1|8545|CGG triplet repeat binding protein 1##AL117392|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_001008390|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_003663|CGGBP1|8545|CGG triplet repeat binding protein 1##AF543494|ZNF654|55279|zinc finger protein 654##NM_018293|ZNF654|55279|zinc finger protein 654	0.999783	CTCF.p2:-4:1.000
chr1	101009341	101009462	reg1013951.p1	8.477	+	AK225748 TSC_hg19_v1_chr1_+_101004594	-4873	+	AB042410 BC036775 NM_022049	-5692	+	BC071578 TSC_hg19_v1_chr1_+_100818053 AF064103 AK310657 AF000367	-191298	+	NM_001078 NM_001199834 NM_080682 TSC_hg19_v1_chr1_+_101185297 AK223266 AK291732 AK296692 BC068490 M30257 BC017276 BC085003 M60335 AB590609 EU831989 EU832082 X53051 CU686647	175905	+	TSC_hg19_v1_chr1_-_101360249 BC014910	350866	-	TSC_hg19_v1_chr1_-_101360368 AK312895 AB009284 AF000416 AK096914 BC036015 AK298124 BC001649 BC001835 BC008722	350969	-	AK225748|GPR88|54112|G protein-coupled receptor 88##AB042410|GPR88|54112|G protein-coupled receptor 88##BC036775|GPR88|54112|G protein-coupled receptor 88##NM_022049|GPR88|54112|G protein-coupled receptor 88##BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_001078|VCAM1|7412|vascular cell adhesion molecule 1##NM_001199834|VCAM1|7412|vascular cell adhesion molecule 1##NM_080682|VCAM1|7412|vascular cell adhesion molecule 1##AK223266|VCAM1|7412|vascular cell adhesion molecule 1##AK291732|VCAM1|7412|vascular cell adhesion molecule 1##AK296692|VCAM1|7412|vascular cell adhesion molecule 1##BC068490|VCAM1|7412|vascular cell adhesion molecule 1##M30257|VCAM1|7412|vascular cell adhesion molecule 1##BC017276|VCAM1|7412|vascular cell adhesion molecule 1##BC085003|VCAM1|7412|vascular cell adhesion molecule 1##M60335|VCAM1|7412|vascular cell adhesion molecule 1##EU831989|VCAM1|7412|vascular cell adhesion molecule 1##EU832082|VCAM1|7412|vascular cell adhesion molecule 1##X53051|VCAM1|7412|vascular cell adhesion molecule 1##BC014910|EXTL2|2135|exostoses (multiple)-like 2##AK312895|EXTL2|2135|exostoses (multiple)-like 2##AB009284|EXTL2|2135|exostoses (multiple)-like 2##AF000416|EXTL2|2135|exostoses (multiple)-like 2##AK096914|EXTL2|2135|exostoses (multiple)-like 2##BC036015|EXTL2|2135|exostoses (multiple)-like 2##AK298124|EXTL2|2135|exostoses (multiple)-like 2	0.394272	CTCF.p2:-92:0.331
chr10	122495436	122495550	reg1014440.p2	8.476	+	NM_001030059 TSC_hg19_v1_chr10_+_122216486 BC101267 BC101268 BC101269 BC122535 BC132787 AK296273 HQ258170 AK310178	-278854	+	NM_007190 TSC_hg19_v1_chr10_+_121652241 AB019435 AK021846 AK314592 AK001135 AK001135 AK301517 BC063800 BC063800 BC002540 AF116723 BX649119 BX649119 AB384691 CU687818 BT006755	-843304	+	AK023143 TSC_hg19_v1_chr10_-_121632359 BC004183 BC007219 NM_024834	-863153	-	NM_018117 TSC_hg19_v1_chr10_+_122610771	115235	+	TSC_hg19_v1_chr10_+_122610873 BC040469 AB037772 AK299524 AF320223 AK301761 BC071564 AK315145 AB385454	115402	+	AB084153 EF057068 EU826598 EU826599 EU826600 EU826601 AB587574 M55614 Z71929 X56191 NM_001144913 NM_001144914	857912	-	NM_001030059|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101267|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101268|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101269|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC122535|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC132787|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##HQ258170|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AK310178|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##NM_007190|SEC23IP|11196|SEC23 interacting protein##AB019435|SEC23IP|11196|SEC23 interacting protein##AK021846|SEC23IP|11196|SEC23 interacting protein##AK314592|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK301517|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC002540|SEC23IP|11196|SEC23 interacting protein##AF116723|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BT006755|SEC23IP|11196|SEC23 interacting protein##AK023143|MCMBP|79892|minichromosome maintenance complex binding protein##BC004183|MCMBP|79892|minichromosome maintenance complex binding protein##BC007219|MCMBP|79892|minichromosome maintenance complex binding protein##NM_024834|MCMBP|79892|minichromosome maintenance complex binding protein##NM_018117|WDR11|55717|WD repeat domain 11##BC040469|WDR11|55717|WD repeat domain 11##AB037772|WDR11|55717|WD repeat domain 11##AK299524|WDR11|55717|WD repeat domain 11##AF320223|WDR11|55717|WD repeat domain 11##AK301761|WDR11|55717|WD repeat domain 11##BC071564|WDR11|55717|WD repeat domain 11##AK315145|WDR11|55717|WD repeat domain 11##AB084153|FGFR2|2263|fibroblast growth factor receptor 2##EF057068|FGFR2|2263|fibroblast growth factor receptor 2##EU826598|FGFR2|2263|fibroblast growth factor receptor 2##EU826599|FGFR2|2263|fibroblast growth factor receptor 2##EU826600|FGFR2|2263|fibroblast growth factor receptor 2##EU826601|FGFR2|2263|fibroblast growth factor receptor 2##M55614|FGFR2|2263|fibroblast growth factor receptor 2##Z71929|FGFR2|2263|fibroblast growth factor receptor 2##X56191|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144913|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144914|FGFR2|2263|fibroblast growth factor receptor 2	0.98422	CTCF.p2:-6:0.984
chr2	98792431	98792561	reg1018353.p1	8.476	+	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	-88850	+	TSC_hg19_v1_chr2_-_98612395 AK098792	-180093	-	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	-180310	-	DQ426863 NM_001079878 NM_001298 DQ067460	170137	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	170409	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	268862	+	NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B##AK098792|TMEM131|23505|transmembrane protein 131##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa	0.0	
chr6	125513593	125513701	reg1015242.p1	8.476	+	AK124817 NM_001003395	-38271	+	TSC_hg19_v1_chr6_+_125474909 NM_001003396 NM_001003397 NM_003287 AK291866 U44427 BC002375 AK291872 AF208012 AK291887	-38708	+	AK093417 AX748113 BC026087 NM_152553	-209136	+	TSC_hg19_v1_chr6_-_125623123 AF529363 BC066332 BC061520 BC003357 AF151888	109458	-	TSC_hg19_v1_chr6_-_125623231 BC001671 NM_016063	109600	-	TSC_hg19_v1_chr6_+_126070724 NM_012259	557080	+	AK124817|TPD52L1|7164|tumor protein D52-like 1##NM_001003395|TPD52L1|7164|tumor protein D52-like 1##NM_001003396|TPD52L1|7164|tumor protein D52-like 1##NM_001003397|TPD52L1|7164|tumor protein D52-like 1##NM_003287|TPD52L1|7164|tumor protein D52-like 1##AK291866|TPD52L1|7164|tumor protein D52-like 1##U44427|TPD52L1|7164|tumor protein D52-like 1##BC002375|TPD52L1|7164|tumor protein D52-like 1##AK291872|TPD52L1|7164|tumor protein D52-like 1##AF208012|TPD52L1|7164|tumor protein D52-like 1##AK291887|TPD52L1|7164|tumor protein D52-like 1##AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217##AF529363|HDDC2|51020|HD domain containing 2##BC066332|HDDC2|51020|HD domain containing 2##BC061520|HDDC2|51020|HD domain containing 2##BC003357|HDDC2|51020|HD domain containing 2##AF151888|HDDC2|51020|HD domain containing 2##BC001671|HDDC2|51020|HD domain containing 2##NM_016063|HDDC2|51020|HD domain containing 2##NM_012259|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	0.449447	CTCF.p2:-17:0.383
chr8	62008744	62008877	reg1013687.p1	8.476	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-417408	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-417522	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-579060	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	191740	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	593536	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	618208	-	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase	0.985961	CTCF.p2:28:0.986
chr12	123749281	123749398	reg1016259.p1	8.475	+	NM_001143905	-31049	+	NM_152269 TSC_hg19_v1_chr12_+_123717982 BC020885 BC062329 AF061733 AK025908 NM_001194995 BC018145	-31389	+	TSC_hg19_v1_chr12_-_123717684 AK096541	-31675	-	DQ891281 DQ894468 BC034717 TSC_hg19_v1_chr12_-_123756363 AB006077 AF006484 NM_004642	7154	-	AY364255 AB014772 BC129949 BC133704 NM_001167856 NM_018183	85646	-	BC030544 TSC_hg19_v1_chr12_-_123849386 AK001695 AK307488	100054	-	NM_001143905|C12orf65|91574|chromosome 12 open reading frame 65##NM_152269|C12orf65|91574|chromosome 12 open reading frame 65##BC020885|C12orf65|91574|chromosome 12 open reading frame 65##BC062329|C12orf65|91574|chromosome 12 open reading frame 65##AF061733|C12orf65|91574|chromosome 12 open reading frame 65##AK025908|C12orf65|91574|chromosome 12 open reading frame 65##NM_001194995|C12orf65|91574|chromosome 12 open reading frame 65##BC018145|C12orf65|91574|chromosome 12 open reading frame 65##AK096541|MPHOSPH9|10198|M-phase phosphoprotein 9##DQ891281|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##DQ894468|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##BC034717|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##AB006077|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##AF006484|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##NM_004642|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##AY364255|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AB014772|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##BC129949|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##BC133704|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##NM_001167856|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##NM_018183|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##BC030544|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AK001695|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AK307488|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	0.985936	CTCF.p2:5:0.986
chr7	39781934	39782054	reg1015486.p2	8.475	+	TSC_hg19_v1_chr7_+_39773192 BC038571	-8762	+	TSC_hg19_v1_chr7_+_39663298 AK308109	-118686	+	TSC_hg19_v1_chr7_+_39663204 BC039858	-118783	+	TSC_hg19_v1_chr7_+_39989642 BC080601	207632	+	BC064414 TSC_hg19_v1_chr7_+_39989879	207890	+	TSC_hg19_v1_chr7_+_39989958 AK092534 NM_003718 NM_031267	207965	+	BC038571|LINC00265|349114|long intergenic non-protein coding RNA 265##AK308109|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##BC080601|CDK13|8621|cyclin-dependent kinase 13##AK092534|CDK13|8621|cyclin-dependent kinase 13##NM_003718|CDK13|8621|cyclin-dependent kinase 13##NM_031267|CDK13|8621|cyclin-dependent kinase 13	0.013768	
chr4	109756086	109756231	reg1016726.p1	8.474	+	AK091888 AX747236 AK294072 AJ298293 AK294235 BC022526 NM_001146590 NM_001146627 NM_031279	-72015	-	AF068297 TSC_hg19_v1_chr4_+_109571786 AK312185 DQ893222 DQ896551 AF343342	-184363	+	TSC_hg19_v1_chr4_+_109571754 NM_021227 BC054857 BC016321 AF161425 AF201937	-184405	+	AF293340 AF293341 NM_032518 NM_198721 TSC_hg19_v1_chr4_-_110223816	467649	-	TSC_hg19_v1_chr4_+_110354836 AJ131245	598689	+	TSC_hg19_v1_chr4_-_110354918 BC009800	598785	-	AK091888|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294072|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AJ298293|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294235|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##BC022526|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146590|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146627|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_031279|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AF068297|OSTC|58505|oligosaccharyltransferase complex subunit##AK312185|OSTC|58505|oligosaccharyltransferase complex subunit##DQ893222|OSTC|58505|oligosaccharyltransferase complex subunit##DQ896551|OSTC|58505|oligosaccharyltransferase complex subunit##AF343342|OSTC|58505|oligosaccharyltransferase complex subunit##NM_021227|OSTC|58505|oligosaccharyltransferase complex subunit##BC054857|OSTC|58505|oligosaccharyltransferase complex subunit##BC016321|OSTC|58505|oligosaccharyltransferase complex subunit##AF161425|OSTC|58505|oligosaccharyltransferase complex subunit##AF201937|OSTC|58505|oligosaccharyltransferase complex subunit##AF293340|COL25A1|84570|collagen, type XXV, alpha 1##AF293341|COL25A1|84570|collagen, type XXV, alpha 1##NM_032518|COL25A1|84570|collagen, type XXV, alpha 1##NM_198721|COL25A1|84570|collagen, type XXV, alpha 1##AJ131245|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC009800|1/2-SBSRNA4|100533182|lncRNA_BC009800	0.015328	
chr4	159772110	159772222	reg1014567.p2	8.473	+	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-81881	+	TSC_hg19_v1_chr4_+_159690177 NM_020840	-81988	+	AB528445 CR542081 DQ891562 DQ894749 TSC_hg19_v1_chr4_-_159644545 BC014893 L11667 BC030707 AK313929 NM_005038	-127638	-	AK058100 NM_152543	184166	-	AK294459 NM_014247	416831	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	3312985	-	AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##NM_020840|FNIP2|57600|folliculin interacting protein 2##CR542081|PPID|5481|peptidylprolyl isomerase D##DQ891562|PPID|5481|peptidylprolyl isomerase D##DQ894749|PPID|5481|peptidylprolyl isomerase D##BC014893|PPID|5481|peptidylprolyl isomerase D##L11667|PPID|5481|peptidylprolyl isomerase D##BC030707|PPID|5481|peptidylprolyl isomerase D##AK313929|PPID|5481|peptidylprolyl isomerase D##NM_005038|PPID|5481|peptidylprolyl isomerase D##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5	0.442595	CTCF.p2:1:0.443
chr4	176458132	176458249	reg1016179.p1	8.473	+	NM_001130703 NM_001130704 NM_001130705 NM_014269 AK292410 BC036070	-618657	+	U93917 BC036086 NM_001042543 NM_006529	-707770	-	AK300524 NM_000860 NM_001145816	-1014399	-	CU692222 CU692662 DQ892372 DQ895581 TSC_hg19_v1_chr4_-_176733403	275203	-	BC010461 BC022508 TSC_hg19_v1_chr4_-_176733419 D49958	275251	-	BC044612 BC053954 TSC_hg19_v1_chr4_-_176733905	275716	-	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29##NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29##AK292410|ADAM29|11086|ADAM metallopeptidase domain 29##BC036070|ADAM29|11086|ADAM metallopeptidase domain 29##U93917|GLRA3|8001|glycine receptor, alpha 3##BC036086|GLRA3|8001|glycine receptor, alpha 3##NM_001042543|GLRA3|8001|glycine receptor, alpha 3##NM_006529|GLRA3|8001|glycine receptor, alpha 3##AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##DQ892372|GPM6A|2823|glycoprotein M6A##DQ895581|GPM6A|2823|glycoprotein M6A##BC010461|GPM6A|2823|glycoprotein M6A##BC022508|GPM6A|2823|glycoprotein M6A##D49958|GPM6A|2823|glycoprotein M6A##BC044612|GPM6A|2823|glycoprotein M6A##BC053954|GPM6A|2823|glycoprotein M6A	0.514852	CTCF.p2:12:0.515
chr7	120748117	120748230	reg1015146.p2	8.473	+	AK025639 AK225313 TSC_hg19_v1_chr7_+_120702920	-45300	+	NM_001105533	-118729	+	TSC_hg19_v1_chr7_+_120628867 AL832638	-119277	+	AF152584 NM_016087	217247	+	AF169963 NM_057168	220916	+	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	288164	-	AK025639|C7orf58|79974|chromosome 7 open reading frame 58##AK225313|C7orf58|79974|chromosome 7 open reading frame 58##NM_001105533|C7orf58|79974|chromosome 7 open reading frame 58##AL832638|C7orf58|79974|chromosome 7 open reading frame 58##AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C	0.996289	CTCF.p2:-9:0.996
chr1	204227629	204227756	reg1016903.p1	8.472	+	CU691306 TSC_hg19_v1_chr1_-_204183117 AB075871 BC058832 AK124645 NM_198447	-44565	-	AF218017 BC022819 AK291695 NM_002256 TSC_hg19_v1_chr1_-_204165620	-62111	-	CR536498 AB464139 CU690486 BC033474 BC047752 NM_000537	-92250	-	AB023186 BC152475 NM_014935 TSC_hg19_v1_chr1_-_204329058	101358	-	TSC_hg19_v1_chr1_+_204380508 BC009873	152829	+	TSC_hg19_v1_chr1_-_204380946 BC065280 AK222877 NM_032833 AK027650 AK303535 AK316092	153248	-	AB075871|GOLT1A|127845|golgi transport 1A##BC058832|GOLT1A|127845|golgi transport 1A##AK124645|GOLT1A|127845|golgi transport 1A##NM_198447|GOLT1A|127845|golgi transport 1A##AF218017|KISS1|3814|KiSS-1 metastasis-suppressor##BC022819|KISS1|3814|KiSS-1 metastasis-suppressor##AK291695|KISS1|3814|KiSS-1 metastasis-suppressor##NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor##CR536498|REN|5972|renin##BC033474|REN|5972|renin##BC047752|REN|5972|renin##NM_000537|REN|5972|renin##AB023186|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC152475|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##NM_014935|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC065280|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK222877|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_032833|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK027650|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK303535|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B	0.935715	CTCF.p2:0:0.936
chr16	2009352	2009461	reg1013560.p2	8.472	+	BC050413 NM_005061 U65581 AK313162	-4726	-	TSC_hg19_v1_chr16_-_1993267 NM_016332	-16126	-	TSC_hg19_v1_chr16_-_1993216 AF187272 AF166124 AF161388 AK026128	-16169	-	NM_004548 AF088991 AK311744 TSC_hg19_v1_chr16_+_2009559 AF044954 BC005829 AK291876 BC007509 AF067169	144	+	AB082925 BC019021 BC007700 AB529037 CU677585 CU677775 CU680300 CU689286 DQ892445 DQ895656 BC001795 BC006559 BC008329 BC008862 BC010165 BC012354 BC013833 BC016178 BC016951 BC018993 BC021545 BC023541 BC025677 BC029979 BC032129 BC035427 BC052235 BC063011 BC071673 BC071922 BC071923 BC071924 BC073966 BC075830 BC106060 TSC_hg19_v1_chr16_-_2014765 AB065089 BC068051 BC105985 BC103756	5255	-	AB055772 AK312173 BC066321 NM_002952 X17206 TSC_hg19_v1_chr16_-_2014830	5422	-	BC050413|RPL3L|6123|ribosomal protein L3-like##NM_005061|RPL3L|6123|ribosomal protein L3-like##U65581|RPL3L|6123|ribosomal protein L3-like##AK313162|RPL3L|6123|ribosomal protein L3-like##NM_016332|SEPX1|51734|selenoprotein X, 1##AF187272|SEPX1|51734|selenoprotein X, 1##AF166124|SEPX1|51734|selenoprotein X, 1##AF161388|SEPX1|51734|selenoprotein X, 1##AK026128|SEPX1|51734|selenoprotein X, 1##NM_004548|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##AF088991|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##AK311744|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##AF044954|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##BC005829|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##AK291876|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##BC007509|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##AF067169|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##AB082925|RPS2|6187|ribosomal protein S2##BC019021|RPS2|6187|ribosomal protein S2##DQ892445|RPS2|6187|ribosomal protein S2##DQ895656|RPS2|6187|ribosomal protein S2##BC001795|RPS2|6187|ribosomal protein S2##BC006559|RPS2|6187|ribosomal protein S2##BC008329|RPS2|6187|ribosomal protein S2##BC008862|RPS2|6187|ribosomal protein S2##BC010165|RPS2|6187|ribosomal protein S2##BC012354|RPS2|6187|ribosomal protein S2##BC013833|RPS2|6187|ribosomal protein S2##BC016178|RPS2|6187|ribosomal protein S2##BC016951|RPS2|6187|ribosomal protein S2##BC018993|RPS2|6187|ribosomal protein S2##BC021545|RPS2|6187|ribosomal protein S2##BC023541|RPS2|6187|ribosomal protein S2##BC025677|RPS2|6187|ribosomal protein S2##BC029979|RPS2|6187|ribosomal protein S2##BC032129|RPS2|6187|ribosomal protein S2##BC035427|RPS2|6187|ribosomal protein S2##BC052235|RPS2|6187|ribosomal protein S2##BC063011|RPS2|6187|ribosomal protein S2##BC071673|RPS2|6187|ribosomal protein S2##BC071922|RPS2|6187|ribosomal protein S2##BC071923|RPS2|6187|ribosomal protein S2##BC071924|RPS2|6187|ribosomal protein S2##BC073966|RPS2|6187|ribosomal protein S2##BC075830|RPS2|6187|ribosomal protein S2##BC106060|RPS2|6187|ribosomal protein S2##AB065089|RPS2|6187|ribosomal protein S2##BC068051|RPS2|6187|ribosomal protein S2##BC105985|RPS2|6187|ribosomal protein S2##BC103756|RPS2|6187|ribosomal protein S2##AK312173|RPS2|6187|ribosomal protein S2##BC066321|RPS2|6187|ribosomal protein S2##NM_002952|RPS2|6187|ribosomal protein S2##X17206|RPS2|6187|ribosomal protein S2	0.0	
chr9	140189930	140190039	reg1016503.p3	8.472	+	TSC_hg19_v1_chr9_+_140172277 AK000252 NM_017723	-17699	+	TSC_hg19_v1_chr9_+_140149888 AF464935 AB384577 AM393289	-40061	+	TSC_hg19_v1_chr9_+_140149768 BC019029	-40185	+	BC053618 NM_001004354 TSC_hg19_v1_chr9_-_140196724	6736	-	BC065002 TSC_hg19_v1_chr9_-_140317615 BC110879 AK000440 AK094438 BC039252 BC037355	127626	-	TSC_hg19_v1_chr9_-_140317652 BC033079 BC069205	127692	-	AK000252|C9orf167|54863|chromosome 9 open reading frame 167##NM_017723|C9orf167|54863|chromosome 9 open reading frame 167##AF464935|COBRA1|25920|cofactor of BRCA1##AM393289|COBRA1|25920|cofactor of BRCA1##BC019029|COBRA1|25920|cofactor of BRCA1##BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein##NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein##BC065002|EXD3|54932|exonuclease 3'-5' domain containing 3##BC110879|EXD3|54932|exonuclease 3'-5' domain containing 3##AK000440|EXD3|54932|exonuclease 3'-5' domain containing 3##AK094438|EXD3|54932|exonuclease 3'-5' domain containing 3##BC039252|EXD3|54932|exonuclease 3'-5' domain containing 3##BC037355|EXD3|54932|exonuclease 3'-5' domain containing 3##BC033079|EXD3|54932|exonuclease 3'-5' domain containing 3##BC069205|EXD3|54932|exonuclease 3'-5' domain containing 3	0.252739	CTCF.p2:5:0.253
chr11	111875264	111875417	reg1018302.p1	8.471	+	TSC_hg19_v1_chr11_+_111848069 NM_033425 AK289807 BC033034 AB051522	-27274	+	TSC_hg19_v1_chr11_+_111808066 BC035509 BC064479 BC128600	-67257	+	TSC_hg19_v1_chr11_+_111807932 DQ642016 NM_001037954	-67432	+	AK057299 NM_001931	20197	+	TSC_hg19_v1_chr11_+_111896166 AK296274 AK303930 AK297103 AF317200 AK223596 AL832703 BC039084 DQ892447 DQ895658 CU691660 Y00978 AK299562	20868	+	AK300496 NM_001082619 NM_138789	69485	-	NM_033425|DIXDC1|85458|DIX domain containing 1##AK289807|DIXDC1|85458|DIX domain containing 1##BC033034|DIXDC1|85458|DIX domain containing 1##AB051522|DIXDC1|85458|DIX domain containing 1##BC035509|DIXDC1|85458|DIX domain containing 1##BC064479|DIXDC1|85458|DIX domain containing 1##BC128600|DIXDC1|85458|DIX domain containing 1##DQ642016|DIXDC1|85458|DIX domain containing 1##NM_001037954|DIXDC1|85458|DIX domain containing 1##AK057299|DLAT|1737|dihydrolipoamide S-acetyltransferase##NM_001931|DLAT|1737|dihydrolipoamide S-acetyltransferase##AK296274|DLAT|1737|dihydrolipoamide S-acetyltransferase##AK303930|DLAT|1737|dihydrolipoamide S-acetyltransferase##AK297103|DLAT|1737|dihydrolipoamide S-acetyltransferase##AF317200|DLAT|1737|dihydrolipoamide S-acetyltransferase##AK223596|DLAT|1737|dihydrolipoamide S-acetyltransferase##AL832703|DLAT|1737|dihydrolipoamide S-acetyltransferase##BC039084|DLAT|1737|dihydrolipoamide S-acetyltransferase##DQ892447|DLAT|1737|dihydrolipoamide S-acetyltransferase##DQ895658|DLAT|1737|dihydrolipoamide S-acetyltransferase##Y00978|DLAT|1737|dihydrolipoamide S-acetyltransferase##AK299562|DLAT|1737|dihydrolipoamide S-acetyltransferase##AK300496|PIH1D2|120379|PIH1 domain containing 2##NM_001082619|PIH1D2|120379|PIH1 domain containing 2##NM_138789|PIH1D2|120379|PIH1 domain containing 2	0.0	
chr1	18249532	18249606	reg1018874.p1	8.470	+	AK057339 NM_030812 BC028909 U20582	-167723	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	-304704	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	-342554	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	184708	+	NM_152375	557854	+	NM_001135254 NM_002584 NM_013945 X96743	707930	+	AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##NM_152375|KLHDC7A|127707|kelch domain containing 7A##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7	0.744002	CTCF.p2:-38:0.744
chr1	79962986	79963117	reg1017809.p1	8.470	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-490624	-	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-847553	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	-876920	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	1808876	+	AF104266 AF104938 AF104939 NM_012302	2303030	+	AK097722 TSC_hg19_v1_chr1_-_84326308	4363217	-	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.0	
chr2	58989476	58989601	reg1014665.p2	8.470	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-521056	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-715550	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-715784	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	1790984	-	AF080216 TSC_hg19_v1_chr2_-_60780784	1791240	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	1993946	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.994218	CTCF.p2:-16:0.994
chr4	139951915	139952058	reg1015401.p1	8.470	+	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	-14993	+	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	-788622	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-1498344	-	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	53417	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	53625	-	U43188 NM_201999	108617	-	AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43188|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_201999|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.99986	CTCF.p2:-13:1.000
chr1	201941888	201941993	reg1015623.p2	8.469	+	NM_006335 BC015098 TSC_hg19_v1_chr1_+_201924640 AK315602 BC009784 BC007106 BC020833 X97544 AF106622 BC000294 BC004439 BC013823	-17302	+	NM_012134 TSC_hg19_v1_chr1_-_201915717	-26224	-	CU687334 AK126474 BC001755 X54162 AK304700 AK304852 AK311740 BC080187 TSC_hg19_v1_chr1_-_201915677 AK295824	-26367	-	TSC_hg19_v1_chr1_+_201951775 NM_020216 AK097372 BC001064	9826	+	TSC_hg19_v1_chr1_+_201951788 BC012166 AJ242586 DQ896012 EU176398 AJ296161	9852	+	NM_001114309 NM_004433 TSC_hg19_v1_chr1_+_201979714 AK309265 AK312273 U97156 BC003569 U73843 U73844 AF016295	37768	+	NM_006335|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC015098|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##AK315602|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC009784|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC007106|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC020833|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##X97544|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##AF106622|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC000294|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC004439|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC013823|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##NM_012134|LMOD1|25802|leiomodin 1 (smooth muscle)##AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)##BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)##X54162|LMOD1|25802|leiomodin 1 (smooth muscle)##AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)##BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)##AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)##NM_020216|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AK097372|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##BC001064|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##BC012166|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AJ242586|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##DQ896012|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##EU176398|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AJ296161|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##NM_001114309|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##NM_004433|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK309265|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK312273|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U97156|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##BC003569|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73843|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73844|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF016295|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )	0.315647	CTCF.p2:15:0.316
chr12	72410988	72411121	reg1015275.p2	8.469	+	AY098914 NM_173353 BC114442 BC114499 AK094614	-78364	+	NM_001146213 NM_001146214 NM_022771 TSC_hg19_v1_chr12_+_72233538 AK022147 AK297626 AK307922 BC028352 AK225747 AL833639 AK225221 AK292306 AB449901	-177519	+	AB385582 AM393692 TSC_hg19_v1_chr12_+_72148987	-262106	+	TSC_hg19_v1_chr12_-_72666143 BC093901 BC093903	255124	-	AK095156 TSC_hg19_v1_chr12_-_72666355	255289	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	255450	+	AY098914|TPH2|121278|tryptophan hydroxylase 2##NM_173353|TPH2|121278|tryptophan hydroxylase 2##BC114442|TPH2|121278|tryptophan hydroxylase 2##BC114499|TPH2|121278|tryptophan hydroxylase 2##AK094614|TPH2|121278|tryptophan hydroxylase 2##NM_001146213|TBC1D15|64786|TBC1 domain family, member 15##NM_001146214|TBC1D15|64786|TBC1 domain family, member 15##NM_022771|TBC1D15|64786|TBC1 domain family, member 15##AK022147|TBC1D15|64786|TBC1 domain family, member 15##AK297626|TBC1D15|64786|TBC1 domain family, member 15##AK307922|TBC1D15|64786|TBC1 domain family, member 15##BC028352|TBC1D15|64786|TBC1 domain family, member 15##AK225747|TBC1D15|64786|TBC1 domain family, member 15##AL833639|TBC1D15|64786|TBC1 domain family, member 15##AK225221|TBC1D15|64786|TBC1 domain family, member 15##AK292306|TBC1D15|64786|TBC1 domain family, member 15##AB449901|TBC1D15|64786|TBC1 domain family, member 15##AM393692|RAB21|23011|RAB21, member RAS oncogene family##BC093901|LOC283392|283392|uncharacterized LOC283392##BC093903|LOC283392|283392|uncharacterized LOC283392##AK095156|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme	0.852931	CTCF.p2:-19:0.853
chr15	20827560	20827680	reg1015813.p1	8.469	+	NM_001145004	-80507	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-116183	-	None	None	None	NM_207355 BC066981	244358	-	NM_207355 BC066981	1255518	-	BC136985 NM_001004719	1540857	+	NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2	0.974797	CTCF.p2:-12:0.975
chr4	42521954	42522076	reg1014709.p2	8.469	+	NM_001080505	-122160	+	AB126828 AB126829 NM_001159547 NM_207406	-367121	-	TSC_hg19_v1_chr4_-_42154719 AK125953 AB463533	-367359	-	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	137073	-	AB528853 NM_001080476	373266	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	1928538	-	NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##AK125953|BEND4|389206|BEN domain containing 4##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8	0.987623	CTCF.p2:17:0.988
chr1	202938223	202938367	reg1018222.p1	8.468	+	AB529197 CU676296 TSC_hg19_v1_chr1_-_202936386 AK075304 AF169481 BC018732 AF087912 AF093822 AF125533 BC000034 AK027319 AK313333 AK074654 AK223416 NM_016243 AY359026	-1925	-	NM_001127687	-10596	-	TSC_hg19_v1_chr1_-_202927466 NM_015999	-10801	-	TSC_hg19_v1_chr1_+_202976501 AK297222	38197	+	AF070537 TSC_hg19_v1_chr1_+_202976519 AK291426 AK312985 AK309745 BC067775	38224	+	TSC_hg19_v1_chr1_+_202976528 BC013073 NM_138391 NM_001079809 BC150647 CU680486 CU688332	38264	+	AK075304|CYB5R1|51706|cytochrome b5 reductase 1##AF169481|CYB5R1|51706|cytochrome b5 reductase 1##BC018732|CYB5R1|51706|cytochrome b5 reductase 1##AF087912|CYB5R1|51706|cytochrome b5 reductase 1##AF093822|CYB5R1|51706|cytochrome b5 reductase 1##AF125533|CYB5R1|51706|cytochrome b5 reductase 1##BC000034|CYB5R1|51706|cytochrome b5 reductase 1##AK313333|CYB5R1|51706|cytochrome b5 reductase 1##AK074654|CYB5R1|51706|cytochrome b5 reductase 1##AK223416|CYB5R1|51706|cytochrome b5 reductase 1##NM_016243|CYB5R1|51706|cytochrome b5 reductase 1##AY359026|CYB5R1|51706|cytochrome b5 reductase 1##NM_001127687|ADIPOR1|51094|adiponectin receptor 1##NM_015999|ADIPOR1|51094|adiponectin receptor 1##AK297222|TMEM183B|653659|transmembrane protein 183B##AF070537|TMEM183A|92703|transmembrane protein 183A##AK291426|TMEM183A|92703|transmembrane protein 183A##AK312985|TMEM183A|92703|transmembrane protein 183A##AK309745|TMEM183A|92703|transmembrane protein 183A##BC067775|TMEM183A|92703|transmembrane protein 183A##BC013073|TMEM183A|92703|transmembrane protein 183A##NM_138391|TMEM183A|92703|transmembrane protein 183A##NM_001079809|TMEM183B|653659|transmembrane protein 183B##BC150647|TMEM183A|92703|transmembrane protein 183A	0.938841	CTCF.p2:4:0.939
chr17	28353849	28353938	reg1012312.p2	8.468	+	NM_198529 BX648689 BC137519	-85189	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	-96760	-	AK302745 AK303060 NM_001145053 AK299608	-96997	+	TSC_hg19_v1_chr17_+_28443846 AK297102 AL136806 NM_032141 AK094552 BC062425 AK313963 BC105044 BC105046 BC143417 BC143539 BC046116 BC040118 AF161358 BC016313 AB462988 AM392705 AM392719 CR533555	89948	+	NM_001045	209060	-	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	265066	-	NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AK297102|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AL136806|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_032141|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK094552|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC062425|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK313963|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105044|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105046|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143417|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143539|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC046116|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC040118|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AF161358|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC016313|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392705|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392719|NSRP1|84081|nuclear speckle splicing regulatory protein 1##CR533555|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_001045|SLC6A4|6532|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase	0.891442	CTCF.p2:0:0.891
chrX	103358092	103358210	reg1016404.p2	8.468	+	NM_001143978 TSC_hg19_v1_chrX_+_103357233	-967	+	AK093522 AX748182 NM_001164416	-63636	+	AY283370 BC118604 BC121816 BC038109 NM_001002916	-89908	-	TSC_hg19_v1_chrX_-_103401691 AL833609 NM_001012755	43506	-	TSC_hg19_v1_chrX_+_103411133 AK091221 AX746858 BC057847 NM_207318	52973	+	TSC_hg19_v1_chrX_+_103411251 BC017665	53116	+	NM_001143978|ZCCHC18|644353|zinc finger, CCHC domain containing 18##AK093522|H2BFM|286436|H2B histone family, member M##NM_001164416|H2BFM|286436|H2B histone family, member M##AY283370|H2BFWT|158983|H2B histone family, member W, testis-specific##BC118604|H2BFWT|158983|H2B histone family, member W, testis-specific##BC121816|H2BFWT|158983|H2B histone family, member W, testis-specific##BC038109|H2BFWT|158983|H2B histone family, member W, testis-specific##NM_001002916|H2BFWT|158983|H2B histone family, member W, testis-specific##AL833609|MCART6|401612|mitochondrial carrier triple repeat 6##NM_001012755|MCART6|401612|mitochondrial carrier triple repeat 6##AK091221|FAM199X|139231|family with sequence similarity 199, X-linked##BC057847|FAM199X|139231|family with sequence similarity 199, X-linked##NM_207318|FAM199X|139231|family with sequence similarity 199, X-linked##BC017665|FAM199X|139231|family with sequence similarity 199, X-linked	0.160485	
chr17	73844632	73844751	reg1015925.p2	8.467	+	TSC_hg19_v1_chr17_-_73840622 BC067084 NM_199242 AK300316	-3907	-	TSC_hg19_v1_chr17_-_73840495 AK024474	-4180	-	EU831417 EU831510 TSC_hg19_v1_chr17_-_73840455 AK301529 AJ578444	-4242	-	AB464357 CU679759 DQ891052 DQ894231 TSC_hg19_v1_chr17_-_73851417 AK293214 AF087866 BC007452 AK057881 BC010616 AK294082 AK294155 AK300875 NM_012478	6747	-	TSC_hg19_v1_chr17_-_73874063 BC017299	29372	-	TSC_hg19_v1_chr17_-_73874663 AY026763 NM_033452	29960	-	BC067084|UNC13D|201294|unc-13 homolog D (C. elegans)##NM_199242|UNC13D|201294|unc-13 homolog D (C. elegans)##AK300316|UNC13D|201294|unc-13 homolog D (C. elegans)##AK024474|UNC13D|201294|unc-13 homolog D (C. elegans)##EU831417|UNC13D|201294|unc-13 homolog D (C. elegans)##EU831510|UNC13D|201294|unc-13 homolog D (C. elegans)##AK301529|UNC13D|201294|unc-13 homolog D (C. elegans)##AJ578444|UNC13D|201294|unc-13 homolog D (C. elegans)##DQ891052|WBP2|23558|WW domain binding protein 2##DQ894231|WBP2|23558|WW domain binding protein 2##AK293214|WBP2|23558|WW domain binding protein 2##AF087866|WBP2|23558|WW domain binding protein 2##BC007452|WBP2|23558|WW domain binding protein 2##AK057881|WBP2|23558|WW domain binding protein 2##BC010616|WBP2|23558|WW domain binding protein 2##AK294082|WBP2|23558|WW domain binding protein 2##AK294155|WBP2|23558|WW domain binding protein 2##AK300875|WBP2|23558|WW domain binding protein 2##NM_012478|WBP2|23558|WW domain binding protein 2##BC017299|TRIM47|91107|tripartite motif containing 47##AY026763|TRIM47|91107|tripartite motif containing 47##NM_033452|TRIM47|91107|tripartite motif containing 47	0.863187	CTCF.p2:8:0.863
chr20	37893303	37893461	reg1015842.p1	8.467	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-302393	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-338314	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-338393	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1424495	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1764112	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1764282	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.959181	CTCF.p2:-3:0.959
chr2	89996178	89996324	reg1015405.p1	8.467	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-376398	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-483018	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-553662	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	81503	+	TSC_hg19_v1_chr2_+_90211706 Z69013	215467	+	TSC_hg19_v1_chr2_-_91847997 BC030764	1851752	-	BC070334|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus	0.971665	CTCF.p2:3:0.972
chr6	55482217	55482334	reg1015784.p2	8.467	+	CU692876 AL137605 AK293856 BC024194 AK055075 AK297191 AK294210 AK127587 NM_001042406 NM_019036	-38343	-	AY358198 NM_207410	-290009	+	NM_001526 AK314279	-443181	+	TSC_hg19_v1_chr6_-_55740358 M60314 BC027958 NM_021073	258091	-	AK291559 TSC_hg19_v1_chr6_-_55740389	258114	-	TSC_hg19_v1_chr6_-_56112233 BC126108 BC143862 BC143863 BC143864 BC143865 AK126586	629961	-	AL137605|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK293856|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##BC024194|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK055075|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK297191|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK294210|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK127587|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_001042406|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_019036|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AY358198|GFRAL|389400|GDNF family receptor alpha like##NM_207410|GFRAL|389400|GDNF family receptor alpha like##NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2##AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2##M60314|BMP5|653|bone morphogenetic protein 5##BC027958|BMP5|653|bone morphogenetic protein 5##NM_021073|BMP5|653|bone morphogenetic protein 5##AK291559|BMP5|653|bone morphogenetic protein 5##BC126108|COL21A1|81578|collagen, type XXI, alpha 1##BC143862|COL21A1|81578|collagen, type XXI, alpha 1##BC143863|COL21A1|81578|collagen, type XXI, alpha 1##BC143864|COL21A1|81578|collagen, type XXI, alpha 1##BC143865|COL21A1|81578|collagen, type XXI, alpha 1##AK126586|COL21A1|81578|collagen, type XXI, alpha 1	0.997437	CTCF.p2:-8:0.997
chr9	107260024	107260142	reg1015333.p1	8.467	+	TSC_hg19_v1_chr9_+_106856844 BC071750 NM_001042550 AK001485 BC032705 BC107891	-403211	+	TSC_hg19_v1_chr9_+_106856625 AY739716 BC130385 BC144163	-403430	+	TSC_hg19_v1_chr9_+_106856601 AL833191 NM_001042551 NM_006444 BC055081 BC061906 AK307752 AK292599 BC017845 AF092563	-403512	+	BC140739 AB529294 NM_001004485	6415	+	NM_001001919 AB463956	29406	-	AB529293 NM_001001961 BC136949 BC136952	39031	-	BC071750|SMC2|10592|structural maintenance of chromosomes 2##NM_001042550|SMC2|10592|structural maintenance of chromosomes 2##AK001485|SMC2|10592|structural maintenance of chromosomes 2##BC032705|SMC2|10592|structural maintenance of chromosomes 2##BC107891|SMC2|10592|structural maintenance of chromosomes 2##AY739716|SMC2|10592|structural maintenance of chromosomes 2##BC130385|SMC2|10592|structural maintenance of chromosomes 2##BC144163|SMC2|10592|structural maintenance of chromosomes 2##AL833191|SMC2|10592|structural maintenance of chromosomes 2##NM_001042551|SMC2|10592|structural maintenance of chromosomes 2##NM_006444|SMC2|10592|structural maintenance of chromosomes 2##BC055081|SMC2|10592|structural maintenance of chromosomes 2##BC061906|SMC2|10592|structural maintenance of chromosomes 2##AK307752|SMC2|10592|structural maintenance of chromosomes 2##AK292599|SMC2|10592|structural maintenance of chromosomes 2##BC017845|SMC2|10592|structural maintenance of chromosomes 2##AF092563|SMC2|10592|structural maintenance of chromosomes 2##BC140739|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1##NM_001004485|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1##NM_001001919|OR13C4|138804|olfactory receptor, family 13, subfamily C, member 4##NM_001001961|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3##BC136949|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3##BC136952|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	0.155665	
chrX	135350727	135350870	reg1017896.p1	8.467	+	AK301478 NM_001173516	-12158	-	TSC_hg19_v1_chrX_-_135333531 AL832120 BC064350 BC040518 NM_001173517 NM_024597	-17170	-	NM_001159701 AK301642 NM_001159699 TSC_hg19_v1_chrX_+_135279205 AK299381 AK299379 AK299450 BC088369 EU832162 EU832256	-71708	+	AY882585 NM_153834	32323	+	L08893 NM_001727 AB528791 AY585193	219400	+	AB209303 NM_001163280 TSC_hg19_v1_chrX_+_135579394	228519	+	AK301478|MAP7D3|79649|MAP7 domain containing 3##NM_001173516|MAP7D3|79649|MAP7 domain containing 3##AL832120|MAP7D3|79649|MAP7 domain containing 3##BC064350|MAP7D3|79649|MAP7 domain containing 3##BC040518|MAP7D3|79649|MAP7 domain containing 3##NM_001173517|MAP7D3|79649|MAP7 domain containing 3##NM_024597|MAP7D3|79649|MAP7 domain containing 3##NM_001159701|FHL1|2273|four and a half LIM domains 1##AK301642|FHL1|2273|four and a half LIM domains 1##NM_001159699|FHL1|2273|four and a half LIM domains 1##AK299381|FHL1|2273|four and a half LIM domains 1##AK299379|FHL1|2273|four and a half LIM domains 1##AK299450|FHL1|2273|four and a half LIM domains 1##BC088369|FHL1|2273|four and a half LIM domains 1##EU832162|FHL1|2273|four and a half LIM domains 1##EU832256|FHL1|2273|four and a half LIM domains 1##AY882585|GPR112|139378|G protein-coupled receptor 112##NM_153834|GPR112|139378|G protein-coupled receptor 112##L08893|BRS3|680|bombesin-like receptor 3##NM_001727|BRS3|680|bombesin-like receptor 3##AY585193|BRS3|680|bombesin-like receptor 3##AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1##NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1	0.660854	CTCF.p2:5:0.661
chr13	71142831	71142953	reg1016358.p1	8.466	+	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	-460351	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-3338388	-	AK289924 NM_022843	-9153238	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	1297367	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	1297871	-	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	1298542	-	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)	0.997578	CTCF.p2:8:0.998
chr13	101797318	101797433	reg1013479.p1	8.465	+	NM_001079669 NM_032813 TSC_hg19_v1_chr13_-_101327108	-470266	-	AK299859 TSC_hg19_v1_chr13_-_101327050 BX648008 AK056409 AK290345 BX647956	-470319	-	TSC_hg19_v1_chr13_-_101241029 AK095850 NM_001195087	-556348	-	AY141972 AK094669 BC012128 NM_052867 TSC_hg19_v1_chr13_-_102068817	271386	-	TSC_hg19_v1_chr13_-_102068838 BC028390	271465	-	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	307620	+	NM_001079669|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##NM_032813|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK095850|A2LD1|87769|AIG2-like domain 1##NM_001195087|A2LD1|87769|AIG2-like domain 1##AY141972|NALCN|259232|sodium leak channel, non-selective##AK094669|NALCN|259232|sodium leak channel, non-selective##BC012128|NALCN|259232|sodium leak channel, non-selective##NM_052867|NALCN|259232|sodium leak channel, non-selective##BC028390|NALCN|259232|sodium leak channel, non-selective##AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)	0.998597	CTCF.p2:-14:0.999
chr20	25275229	25275328	reg1012831.p1	8.465	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	-46520	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	-98798	+	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	-98908	+	CU680756 AK075023 AK290815 AK293495 TSC_hg19_v1_chr20_-_25371426	96107	-	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	96248	-	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	113044	+	NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK075023|ABHD12|26090|abhydrolase domain containing 12##AK290815|ABHD12|26090|abhydrolase domain containing 12##AK293495|ABHD12|26090|abhydrolase domain containing 12##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	1.065766	CTCF.p2:-21:0.420	CTCF.p2:-67:0.646
chr3	71779135	71779254	reg1015253.p1	8.465	+	NM_001134650	-926	-	AK126999 TSC_hg19_v1_chr3_-_71774554 NM_001134651	-4690	-	TSC_hg19_v1_chr3_-_71632874 AK122710 NM_001244808 BC005055 BC054815 BC071893 BC080521 BC068481 NM_001012505 NM_001244810 NM_032682	-146216	-	AB040799 HQ709187 NM_018971	24006	+	TSC_hg19_v1_chr3_-_71803513 NM_001134649	24328	-	AK313656 NM_173359	24729	-	NM_001134650|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##AK126999|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134651|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##AK122710|FOXP1|27086|forkhead box P1##NM_001244808|FOXP1|27086|forkhead box P1##BC005055|FOXP1|27086|forkhead box P1##BC054815|FOXP1|27086|forkhead box P1##BC071893|FOXP1|27086|forkhead box P1##BC080521|FOXP1|27086|forkhead box P1##BC068481|FOXP1|27086|forkhead box P1##NM_001012505|FOXP1|27086|forkhead box P1##NM_001244810|FOXP1|27086|forkhead box P1##NM_032682|FOXP1|27086|forkhead box P1##AB040799|GPR27|2850|G protein-coupled receptor 27##HQ709187|GPR27|2850|G protein-coupled receptor 27##NM_018971|GPR27|2850|G protein-coupled receptor 27##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3	0.999819	CTCF.p2:-14:1.000
chr5	1380584	1380719	reg1013784.p1	8.465	+	AB045223 DQ892147 DQ895343 AK027306 BC025305 NM_030782 TSC_hg19_v1_chr5_-_1345095	-35629	-	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	-85560	-	AK055798 NM_182632 AK298257 BC056757	-155161	+	S46955 EF174603 M95167 NM_001044	64875	-	CU676500 BC020166 AK090444 TSC_hg19_v1_chr5_-_1494996	114283	-	TSC_hg19_v1_chr5_-_1523908 AB244719 AB463849	143283	-	AB045223|CLPTM1L|81037|CLPTM1-like##DQ892147|CLPTM1L|81037|CLPTM1-like##DQ895343|CLPTM1L|81037|CLPTM1-like##AK027306|CLPTM1L|81037|CLPTM1-like##BC025305|CLPTM1L|81037|CLPTM1-like##NM_030782|CLPTM1L|81037|CLPTM1-like##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase##AK055798|SLC6A18|348932|solute carrier family 6, member 18##NM_182632|SLC6A18|348932|solute carrier family 6, member 18##AK298257|SLC6A18|348932|solute carrier family 6, member 18##BC056757|SLC6A18|348932|solute carrier family 6, member 18##S46955|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##EF174603|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##M95167|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##NM_001044|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##BC020166|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AK090444|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AB244719|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1	1.010216	CTCF.p2:-1:0.993
chr2	23789753	23789840	reg1015403.p1	8.464	+	NM_052920	-181499	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2522867	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-2522897	-	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	360150	-	TSC_hg19_v1_chr2_+_24150144 BC037901	360361	+	TSC_hg19_v1_chr2_+_24163332 BC092484 AL832079 NM_181713 BC111997 BC093681 BC143298	373575	+	NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A##BC092484|UBXN2A|165324|UBX domain protein 2A##AL832079|UBXN2A|165324|UBX domain protein 2A##NM_181713|UBXN2A|165324|UBX domain protein 2A##BC111997|UBXN2A|165324|UBX domain protein 2A##BC093681|UBXN2A|165324|UBX domain protein 2A##BC143298|UBXN2A|165324|UBX domain protein 2A	0.687504	CTCF.p2:-3:0.688
chr3	146909683	146909815	reg1015050.p2	8.464	+	AY436642 NM_001085420	-585747	-	BC157886 BC171917 TSC_hg19_v1_chr3_-_146323105	-586682	-	TSC_hg19_v1_chr3_-_146262505 AF098642 AB006746 NM_021105	-647225	-	BC041954 TSC_hg19_v1_chr3_+_147111244	201483	+	AK294831 NM_001168378	212321	-	AK293981 NM_001168379	213557	-	AY436642|PLSCR5|389158|phospholipid scramblase family, member 5##NM_001085420|PLSCR5|389158|phospholipid scramblase family, member 5##BC157886|PLSCR5|389158|phospholipid scramblase family, member 5##BC171917|PLSCR5|389158|phospholipid scramblase family, member 5##AF098642|PLSCR1|5359|phospholipid scramblase 1##AB006746|PLSCR1|5359|phospholipid scramblase 1##NM_021105|PLSCR1|5359|phospholipid scramblase 1##AK294831|ZIC4|84107|Zic family member 4##NM_001168378|ZIC4|84107|Zic family member 4##AK293981|ZIC4|84107|Zic family member 4##NM_001168379|ZIC4|84107|Zic family member 4	0.33369	CTCF.p2:0:0.334
chr13	35738584	35738722	reg1018307.p1	8.463	+	TSC_hg19_v1_chr13_+_35516429 NM_015678 AF467288	-222195	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	-1346369	+	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	-1346426	+	BC028170 AB593021 TSC_hg19_v1_chr13_-_36050827 AB593022 AK313185 AB073388 NM_005584	312143	-	AK294737 NM_001204197 TSC_hg19_v1_chr13_+_36050945 AK315939	312272	+	AK299059 AK311183 AK295777 TSC_hg19_v1_chr13_-_36429805 CR627093 AK308925 AK311434 AK311438 AK311195 NM_001195415 NM_001195416 NM_001195430	691244	-	NM_015678|NBEA|26960|neurobeachin##AF467288|NBEA|26960|neurobeachin##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK294737|NBEA|26960|neurobeachin##NM_001204197|NBEA|26960|neurobeachin##AK315939|NBEA|26960|neurobeachin##AK299059|DCLK1|9201|doublecortin-like kinase 1##AK311183|DCLK1|9201|doublecortin-like kinase 1##AK295777|DCLK1|9201|doublecortin-like kinase 1##CR627093|DCLK1|9201|doublecortin-like kinase 1##AK308925|DCLK1|9201|doublecortin-like kinase 1##AK311434|DCLK1|9201|doublecortin-like kinase 1##AK311438|DCLK1|9201|doublecortin-like kinase 1##AK311195|DCLK1|9201|doublecortin-like kinase 1##NM_001195415|DCLK1|9201|doublecortin-like kinase 1##NM_001195416|DCLK1|9201|doublecortin-like kinase 1##NM_001195430|DCLK1|9201|doublecortin-like kinase 1	0.990253	CTCF.p2:13:0.990
chr14	75985200	75985321	reg1014379.p2	8.463	+	BC051303 NM_001135049	-86424	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	-90247	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	-90619	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	3530	+	TSC_hg19_v1_chr14_+_75988840 D42106	3592	+	NM_017791 AY260572 AY260577 BC019087 AK000378	59705	+	BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	0.075758	
chr6	126317266	126317389	reg1015493.p1	8.462	+	TSC_hg19_v1_chr6_+_126307685 AK308651	-9664	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	-9725	+	TSC_hg19_v1_chr6_+_126277915 NM_138571 BX647228 AK309857 BC015732 AK057688 AJ420577 AY035387 AY035388 AY486460 AY486461 DQ892201 DQ895396	-39342	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	343943	+	TSC_hg19_v1_chr6_+_127439818 BC022367	1122484	+	NM_032784 AF251057	1122724	+	AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_138571|HINT3|135114|histidine triad nucleotide binding protein 3##BX647228|HINT3|135114|histidine triad nucleotide binding protein 3##AK309857|HINT3|135114|histidine triad nucleotide binding protein 3##BC015732|HINT3|135114|histidine triad nucleotide binding protein 3##AK057688|HINT3|135114|histidine triad nucleotide binding protein 3##AJ420577|HINT3|135114|histidine triad nucleotide binding protein 3##AY035387|HINT3|135114|histidine triad nucleotide binding protein 3##AY035388|HINT3|135114|histidine triad nucleotide binding protein 3##AY486460|HINT3|135114|histidine triad nucleotide binding protein 3##AY486461|HINT3|135114|histidine triad nucleotide binding protein 3##DQ892201|HINT3|135114|histidine triad nucleotide binding protein 3##DQ895396|HINT3|135114|histidine triad nucleotide binding protein 3##BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##BC022367|RSPO3|84870|R-spondin 3##NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3	0.972476	CTCF.p2:-13:0.972
chr8	62156670	62156769	reg1015455.p2	8.462	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-565317	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-565431	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-726969	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	43831	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	445627	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	470299	-	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase	0.948745	CTCF.p2:-2:0.949
chr1	185139407	185139559	reg1004918.p1	8.461	+	TSC_hg19_v1_chr1_+_185126418 AK291443	-13087	+	NM_001105518 AK127980 TSC_hg19_v1_chr1_+_185126298 BC030781 NM_017673 AK315802	-13213	+	AK302166 TSC_hg19_v1_chr1_-_185126203 NM_001202423	-13292	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	146836	-	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	146987	-	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	564093	+	AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##NM_001105518|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK127980|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##BC030781|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##NM_017673|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK315802|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK302166|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##NM_001202423|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1	0.877782	CTCF.p2:0:0.878
chr15	65326146	65326270	reg1016134.p2	8.461	+	TSC_hg19_v1_chr15_-_65321968 AK055688 AB590989 BC016630 BC033687 AK301390 NM_139242	-4245	-	TSC_hg19_v1_chr15_-_65282253 AK301362 NM_001127890 NM_016630	-43962	-	TSC_hg19_v1_chr15_-_65282170 AK172849 AK225527 AK312943 BC000244	-44074	-	NM_178859 AK129601	11547	+	CU691030 AK314914 AK296261 TSC_hg19_v1_chr15_-_65360286 AF233588	34023	-	BC053734 TSC_hg19_v1_chr15_-_65360332 NM_016563	34134	-	AK055688|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##BC016630|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##BC033687|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##AK301390|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##NM_139242|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_178859|OSTBETA|123264|organic solute transporter beta##AK129601|OSTBETA|123264|organic solute transporter beta##AK314914|RASL12|51285|RAS-like, family 12##AK296261|RASL12|51285|RAS-like, family 12##AF233588|RASL12|51285|RAS-like, family 12##BC053734|RASL12|51285|RAS-like, family 12##NM_016563|RASL12|51285|RAS-like, family 12	0.787296	CTCF.p2:-3:0.787
chrX	17806694	17806816	reg1015532.p2	8.460	+	TSC_hg19_v1_chrX_+_17755572 BC026159 NM_001037535 NM_001037536 NM_001037540 NM_006746 AK313993 BC009193 AF160728	-51160	+	AY456992 NM_001136024	-153343	+	TSC_hg19_v1_chrX_+_17393877 GQ988776	-412875	+	AK056214 AK298873 AK314631 NM_001172732 NM_001172739 NM_001172743 NM_021785	72650	-	DQ892470 DQ895683 BC096745 BC037301 AK128155 NM_001184767 NM_153346	432193	-	Y18004 BC051913 TSC_hg19_v1_chrX_-_18372809 BC064617 AK303064 AK315116 BC040497 NM_006089	566055	-	BC026159|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037535|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037536|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037540|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_006746|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AK313993|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##BC009193|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AF160728|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##GQ988776|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AK056214|RAI2|10742|retinoic acid induced 2##AK298873|RAI2|10742|retinoic acid induced 2##AK314631|RAI2|10742|retinoic acid induced 2##NM_001172732|RAI2|10742|retinoic acid induced 2##NM_001172739|RAI2|10742|retinoic acid induced 2##NM_001172743|RAI2|10742|retinoic acid induced 2##NM_021785|RAI2|10742|retinoic acid induced 2##DQ892470|BEND2|139105|BEN domain containing 2##DQ895683|BEND2|139105|BEN domain containing 2##BC096745|BEND2|139105|BEN domain containing 2##BC037301|BEND2|139105|BEN domain containing 2##AK128155|BEND2|139105|BEN domain containing 2##NM_001184767|BEND2|139105|BEN domain containing 2##NM_153346|BEND2|139105|BEN domain containing 2##Y18004|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC051913|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC064617|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK303064|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK315116|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC040497|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##NM_006089|SCML2|10389|sex comb on midleg-like 2 (Drosophila)	0.99971	CTCF.p2:-17:1.000
chr15	54375204	54375331	reg1017378.p1	8.459	+	NM_001080534	-70167	+	AK096055 BX537884 NM_182758	-323420	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-1293073	-	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	1113825	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	1113912	-	AF125393 NM_183234 U57094 U38654 NM_004580	1187270	-	NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family	0.944096	CTCF.p2:-19:0.944
chr19	50393408	50393554	reg1015737.p1	8.459	+	TSC_hg19_v1_chr19_+_50381392 AK090606 AX746531	-12023	+	NM_001168222 NM_024682 TSC_hg19_v1_chr19_+_50380945 BC003516 AK022230 AK300007 AK309412 AB449903 AB590884 CU678472	-12632	+	BC016043 BC007416 AK226004 BC051844 TSC_hg19_v1_chr19_-_50380601 BC015562 NM_032375 AK123687 NM_001098633 NM_001098632	-12934	-	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	6672	-	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	19621	-	NM_012068 AK290592	38507	+	AK090606|TBC1D17|79735|TBC1 domain family, member 17##NM_001168222|TBC1D17|79735|TBC1 domain family, member 17##NM_024682|TBC1D17|79735|TBC1 domain family, member 17##BC003516|TBC1D17|79735|TBC1 domain family, member 17##AK022230|TBC1D17|79735|TBC1 domain family, member 17##AK300007|TBC1D17|79735|TBC1 domain family, member 17##AK309412|TBC1D17|79735|TBC1 domain family, member 17##AB449903|TBC1D17|79735|TBC1 domain family, member 17##BC016043|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC007416|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##AK226004|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC051844|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC015562|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_032375|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##AK123687|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_001098633|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_001098632|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5	0.0	
chr20	39693214	39693333	reg1014737.p2	8.459	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	-35609	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	-35779	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-375396	-	TSC_hg19_v1_chr20_+_39765861 AB210028	72589	+	TSC_hg19_v1_chr20_+_39766146 NM_002660 NM_182811 BC136466 BC144136 M34667	72915	+	TSC_hg19_v1_chr20_-_39766625 BC035080	73335	-	BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##AB210028|PLCG1|5335|phospholipase C, gamma 1##NM_002660|PLCG1|5335|phospholipase C, gamma 1##NM_182811|PLCG1|5335|phospholipase C, gamma 1##BC136466|PLCG1|5335|phospholipase C, gamma 1##BC144136|PLCG1|5335|phospholipase C, gamma 1##M34667|PLCG1|5335|phospholipase C, gamma 1	0.0	
chr2	208898943	208899076	reg1016155.p2	8.459	+	TSC_hg19_v1_chr2_-_208890252 BX648983 NM_001080475	-8745	-	U43318 AB043702 NM_003468	-264913	-	TSC_hg19_v1_chr2_+_208576466 BC067253	-322509	+	HQ258094 U66583 BC117338 BC117340 NM_006891	90187	-	AB590655 U66582 BC074954 BC074955 NM_020989	95471	-	BC074944 BC074945 BC117384 BC117388 NM_005210	111867	-	BX648983|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##NM_001080475|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##U43318|FZD5|7855|frizzled family receptor 5##AB043702|FZD5|7855|frizzled family receptor 5##NM_003468|FZD5|7855|frizzled family receptor 5##BC067253|CCNYL1|151195|cyclin Y-like 1##HQ258094|CRYGD|1421|crystallin, gamma D##U66583|CRYGD|1421|crystallin, gamma D##BC117338|CRYGD|1421|crystallin, gamma D##BC117340|CRYGD|1421|crystallin, gamma D##NM_006891|CRYGD|1421|crystallin, gamma D##U66582|CRYGC|1420|crystallin, gamma C##BC074954|CRYGC|1420|crystallin, gamma C##BC074955|CRYGC|1420|crystallin, gamma C##NM_020989|CRYGC|1420|crystallin, gamma C##BC074944|CRYGB|1419|crystallin, gamma B##BC074945|CRYGB|1419|crystallin, gamma B##BC117384|CRYGB|1419|crystallin, gamma B##BC117388|CRYGB|1419|crystallin, gamma B##NM_005210|CRYGB|1419|crystallin, gamma B	0.350428	CTCF.p2:11:0.350
chr3	32376287	32376420	reg1016847.p1	8.459	+	TSC_hg19_v1_chr3_+_32280215 BC041390	-96134	+	TSC_hg19_v1_chr3_+_32280171 AF474370 AY598783 NM_178868	-96188	+	TSC_hg19_v1_chr3_+_32148151 BC028726 AK292808 AB385275	-228185	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	56816	+	TSC_hg19_v1_chr3_+_32433370 BC010116 AY174113 DQ132881 AK308878	57050	+	CR457231 TSC_hg19_v1_chr3_-_32544290	167919	-	BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AF474370|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AY598783|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##NM_178868|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##BC028726|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AK292808|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##BC010116|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AY174113|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##DQ132881|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AK308878|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##CR457231|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6	0.0	
chrX	22766667	22766784	reg1015463.p1	8.459	+	GQ355336 NM_152577 AK098601 BC074910 BC126190 BC126192 HQ258412 HQ258552	-475657	+	NM_000444 U87284 AD000712 AK298030 BC105057 BC105059 U75645 U60475	-715700	+	NM_004595 TSC_hg19_v1_chrX_+_21958824 AD001528 AK293455 AK313834 BC009898 BC085621 EU176347	-807899	+	AY039237 NM_182699 BC067878 BC051703	251359	+	AK298796 NM_173495 AK054858 BC121061	586335	+	TSC_hg19_v1_chrX_+_23685615 BC016770	918898	+	GQ355336|ZNF645|158506|zinc finger protein 645##NM_152577|ZNF645|158506|zinc finger protein 645##AK098601|ZNF645|158506|zinc finger protein 645##BC074910|ZNF645|158506|zinc finger protein 645##BC126190|ZNF645|158506|zinc finger protein 645##BC126192|ZNF645|158506|zinc finger protein 645##HQ258412|ZNF645|158506|zinc finger protein 645##HQ258552|ZNF645|158506|zinc finger protein 645##NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##NM_004595|SMS|6611|spermine synthase##AD001528|SMS|6611|spermine synthase##AK293455|SMS|6611|spermine synthase##AK313834|SMS|6611|spermine synthase##BC009898|SMS|6611|spermine synthase##BC085621|SMS|6611|spermine synthase##EU176347|SMS|6611|spermine synthase##AY039237|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##NM_182699|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC067878|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC051703|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##AK298796|PTCHD1|139411|patched domain containing 1##NM_173495|PTCHD1|139411|patched domain containing 1##AK054858|PTCHD1|139411|patched domain containing 1##BC121061|PTCHD1|139411|patched domain containing 1##BC016770|PRDX4|10549|peroxiredoxin 4	0.972475	CTCF.p2:4:0.972
chr14	53773007	53773171	reg1016159.p1	8.458	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-153039	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-153121	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-153216	-	NM_130851	648180	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	650444	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	1090632	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.998335	CTCF.p2:12:0.998
chr16	82490348	82490476	reg1017078.p1	8.458	+	CU689076 AB463897 TSC_hg19_v1_chr16_-_82203821 BC005242 BC031017 BC011020 BC029395 X98263 AK222667 AK314163 NM_005792	-286602	-	TSC_hg19_v1_chr16_+_82068989 DQ893100 DQ896372	-421419	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	-421480	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	169982	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	170177	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	170257	+	BC005242|MPHOSPH6|10200|M-phase phosphoprotein 6##BC031017|MPHOSPH6|10200|M-phase phosphoprotein 6##BC011020|MPHOSPH6|10200|M-phase phosphoprotein 6##BC029395|MPHOSPH6|10200|M-phase phosphoprotein 6##X98263|MPHOSPH6|10200|M-phase phosphoprotein 6##AK222667|MPHOSPH6|10200|M-phase phosphoprotein 6##AK314163|MPHOSPH6|10200|M-phase phosphoprotein 6##NM_005792|MPHOSPH6|10200|M-phase phosphoprotein 6##DQ893100|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##DQ896372|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)	1.03033	CTCF.p2:-9:0.999
chr2	239048328	239048453	reg1016812.p1	8.458	+	NM_198582	-1028	+	NM_194312 AK124559	-39403	+	TSC_hg19_v1_chr2_+_238969747 BC000586 AK293283	-78623	+	CR533533 FJ491380 FJ491381 CU675457 AB590373 DQ892800 DQ896047 EU832279 EU832364 TSC_hg19_v1_chr2_-_239112267 AL136850 BC035746 AY024365	63849	-	TSC_hg19_v1_chr2_-_239112326 BC006576 HQ658059 HQ658060 NM_030768	63932	-	TSC_hg19_v1_chr2_-_239112354 AK001043	63954	-	NM_198582|KLHL30|377007|kelch-like 30 (Drosophila)##NM_194312|ESPNL|339768|espin-like##AK124559|ESPNL|339768|espin-like##BC000586|SCLY|51540|selenocysteine lyase##AK293283|SCLY|51540|selenocysteine lyase##CR533533|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##FJ491380|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##FJ491381|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##DQ892800|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##DQ896047|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##EU832279|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##EU832364|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##AL136850|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##BC035746|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##AY024365|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##BC006576|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##HQ658059|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##HQ658060|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##NM_030768|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##AK001043|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase	0.804845	CTCF.p2:7:0.805
chr4	110327610	110327729	reg1015814.p1	8.458	+	AF293340 AF293341 NM_032518 NM_198721 TSC_hg19_v1_chr4_-_110223816	-103862	-	AK091888 AX747236 AK294072 AJ298293 AK294235 BC022526 NM_001146590 NM_001146627 NM_031279	-643526	-	AF068297 TSC_hg19_v1_chr4_+_109571786 AK312185 DQ893222 DQ896551 AF343342	-755874	+	TSC_hg19_v1_chr4_+_110354836 AJ131245	27178	+	TSC_hg19_v1_chr4_-_110354918 BC009800	27274	-	BC117135 BC143268 BC143269 BC143276 TSC_hg19_v1_chr4_+_110354970 NM_001042734 NM_006323	27279	+	AF293340|COL25A1|84570|collagen, type XXV, alpha 1##AF293341|COL25A1|84570|collagen, type XXV, alpha 1##NM_032518|COL25A1|84570|collagen, type XXV, alpha 1##NM_198721|COL25A1|84570|collagen, type XXV, alpha 1##AK091888|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294072|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AJ298293|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294235|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##BC022526|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146590|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146627|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_031279|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AF068297|OSTC|58505|oligosaccharyltransferase complex subunit##AK312185|OSTC|58505|oligosaccharyltransferase complex subunit##DQ893222|OSTC|58505|oligosaccharyltransferase complex subunit##DQ896551|OSTC|58505|oligosaccharyltransferase complex subunit##AF343342|OSTC|58505|oligosaccharyltransferase complex subunit##AJ131245|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC009800|1/2-SBSRNA4|100533182|lncRNA_BC009800##BC117135|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143268|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143269|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143276|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_001042734|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_006323|SEC24B|10427|SEC24 family, member B (S. cerevisiae)	0.129193	
chr6	116857427	116857550	reg1016263.p1	8.458	+	AK300309 AY358252 NM_153036 BC057769 AK056801	-7280	+	BC032556 NM_153711 AK094140 AK315572	-24667	+	NM_001010919	-74933	+	NM_001139444	9284	-	AK290727 TSC_hg19_v1_chr6_+_116892562	35057	+	TSC_hg19_v1_chr6_+_116892580 NM_001007464 NM_015952 NM_016104	35114	+	AK300309|FAM26D|221301|family with sequence similarity 26, member D##AY358252|FAM26D|221301|family with sequence similarity 26, member D##NM_153036|FAM26D|221301|family with sequence similarity 26, member D##BC057769|FAM26D|221301|family with sequence similarity 26, member D##AK056801|FAM26D|221301|family with sequence similarity 26, member D##BC032556|FAM26E|254228|family with sequence similarity 26, member E##NM_153711|FAM26E|254228|family with sequence similarity 26, member E##AK094140|FAM26E|254228|family with sequence similarity 26, member E##AK315572|FAM26E|254228|family with sequence similarity 26, member E##NM_001010919|FAM26F|441168|family with sequence similarity 26, member F##NM_001139444|BET3L|100128327|BET3 like (S. cerevisiae)##AK290727|RWDD1|51389|RWD domain containing 1##NM_001007464|RWDD1|51389|RWD domain containing 1##NM_015952|RWDD1|51389|RWD domain containing 1##NM_016104|RWDD1|51389|RWD domain containing 1	0.994415	CTCF.p2:0:0.994
chr8	18054922	18055058	reg1017971.p1	8.458	+	NM_001160179	-27020	+	TSC_hg19_v1_chr8_-_17942455 AK025732 BC016828 NM_001127505 NM_004315	-112532	-	TSC_hg19_v1_chr8_-_17942339 CU677731 AY305384	-112662	-	AJ581152 NM_000662 NM_001160170 NM_001160171 NM_001160172 NM_001160173 NM_001160175 NM_001160176 BC047666 BX647521 BC013732 AJ581135 TSC_hg19_v1_chr8_+_18067655	12644	+	AJ581141 NM_001160174	24186	+	D90042 NM_000015 BC067218 BC015878 D90040 AJ581144	193798	+	NM_001160179|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##AK025732|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1##BC016828|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1##NM_001127505|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1##NM_004315|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1##AY305384|ASAH1|427|N-acylsphingosine amidohydrolase (acid ceramidase) 1##AJ581152|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_000662|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160170|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160171|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160172|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160173|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160175|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160176|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BC047666|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BX647521|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BC013732|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##AJ581135|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##AJ581141|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160174|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##D90042|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##NM_000015|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC067218|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC015878|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##D90040|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##AJ581144|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)	0.429333	CTCF.p2:-6:0.221	CTCF.p2:11:0.208
chr9	106552121	106552227	reg1015484.p2	8.458	+	BC058038 NM_001340 AK313349 BC114547 Z46788	-794547	+	AB075853 BC167432 NM_133445 TSC_hg19_v1_chr9_-_104500930	-2051273	-	TSC_hg19_v1_chr9_-_104500218 AB385519 AF416558 AJ416950	-2051929	-	TSC_hg19_v1_chr9_+_106856601 AL833191 NM_001042551 NM_006444 BC055081 BC061906 AK307752 AK292599 BC017845 AF092563	304397	+	TSC_hg19_v1_chr9_+_106856625 AY739716 BC130385 BC144163	304479	+	TSC_hg19_v1_chr9_+_106856844 BC071750 NM_001042550 AK001485 BC032705 BC107891	304698	+	BC058038|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##NM_001340|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##AK313349|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##BC114547|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##Z46788|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##AB075853|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##BC167432|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##NM_133445|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AF416558|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AJ416950|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AL833191|SMC2|10592|structural maintenance of chromosomes 2##NM_001042551|SMC2|10592|structural maintenance of chromosomes 2##NM_006444|SMC2|10592|structural maintenance of chromosomes 2##BC055081|SMC2|10592|structural maintenance of chromosomes 2##BC061906|SMC2|10592|structural maintenance of chromosomes 2##AK307752|SMC2|10592|structural maintenance of chromosomes 2##AK292599|SMC2|10592|structural maintenance of chromosomes 2##BC017845|SMC2|10592|structural maintenance of chromosomes 2##AF092563|SMC2|10592|structural maintenance of chromosomes 2##AY739716|SMC2|10592|structural maintenance of chromosomes 2##BC130385|SMC2|10592|structural maintenance of chromosomes 2##BC144163|SMC2|10592|structural maintenance of chromosomes 2##BC071750|SMC2|10592|structural maintenance of chromosomes 2##NM_001042550|SMC2|10592|structural maintenance of chromosomes 2##AK001485|SMC2|10592|structural maintenance of chromosomes 2##BC032705|SMC2|10592|structural maintenance of chromosomes 2##BC107891|SMC2|10592|structural maintenance of chromosomes 2	0.132154	
chr1	204415123	204415227	reg1000355.p1	8.457	+	TSC_hg19_v1_chr1_-_204380946 BC065280 AK222877 NM_032833 AK027650 AK303535 AK316092	-34235	-	TSC_hg19_v1_chr1_+_204380508 BC009873	-34654	+	AB023186 BC152475 NM_014935 TSC_hg19_v1_chr1_-_204329058	-86125	-	BC132876 BC136645 BC144342 NM_002646 AK308153	44323	-	TSC_hg19_v1_chr1_-_204463934 BC094741	48590	-	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	70327	+	BC065280|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK222877|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_032833|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK027650|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK303535|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AB023186|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC152475|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##NM_014935|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC132876|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC136645|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC144342|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_002646|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AK308153|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	1.16579	CTCF.p2:4:0.900	CTCF.p2:24:0.255
chr17	58498692	58498855	reg1011862.p1	8.457	+	TSC_hg19_v1_chr17_-_58469580 NM_032582 AK057301	-29101	-	TSC_hg19_v1_chr17_-_58469447 AF533230	-29315	-	CU691084 TSC_hg19_v1_chr17_-_58469313 BC054344	-29455	-	TSC_hg19_v1_chr17_+_58499858 NM_181707 BC036356 BC048806	1106	+	AB587349 TSC_hg19_v1_chr17_-_58603343 AK292227	104556	-	AK307666 TSC_hg19_v1_chr17_-_58603582 BC018121 AF017782 D86981 NM_006380	104764	-	NM_032582|USP32|84669|ubiquitin specific peptidase 32##AK057301|USP32|84669|ubiquitin specific peptidase 32##AF533230|USP32|84669|ubiquitin specific peptidase 32##BC054344|USP32|84669|ubiquitin specific peptidase 32##NM_181707|C17orf64|124773|chromosome 17 open reading frame 64##BC036356|C17orf64|124773|chromosome 17 open reading frame 64##BC048806|C17orf64|124773|chromosome 17 open reading frame 64##AK292227|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##AK307666|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##BC018121|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##AF017782|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##D86981|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##NM_006380|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	0.613905	CTCF.p2:3:0.614
chr2	238231356	238231473	reg1015189.p1	8.457	+	TSC_hg19_v1_chr2_+_237994551 AK289891 BC067774 AK308962 U51205 BC003090 BC080617 CR456994 CU678366	-236837	+	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	-236894	+	TSC_hg19_v1_chr2_-_237994424 AK056246	-236977	-	TSC_hg19_v1_chr2_-_238322786 AK092021 AX747317 AK304870 BC144595 BC150625 BC171790	91371	-	AK308451 TSC_hg19_v1_chr2_-_238322808 BX647500	91395	-	AK303290 TSC_hg19_v1_chr2_-_238322814	91400	-	AK289891|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK308962|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##U51205|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC003090|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC080617|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##CR456994|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK092021|COL6A3|1293|collagen, type VI, alpha 3##AK304870|COL6A3|1293|collagen, type VI, alpha 3##BC144595|COL6A3|1293|collagen, type VI, alpha 3##BC150625|COL6A3|1293|collagen, type VI, alpha 3##BC171790|COL6A3|1293|collagen, type VI, alpha 3##AK308451|COL6A3|1293|collagen, type VI, alpha 3##BX647500|COL6A3|1293|collagen, type VI, alpha 3##AK303290|COL6A3|1293|collagen, type VI, alpha 3	0.937978	CTCF.p2:-11:0.938
chr5	75879404	75879542	reg1016058.p2	8.457	+	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	-180357	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-500202	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-866213	-	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	39672	-	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	132483	+	NM_005242 BC018130 TSC_hg19_v1_chr5_+_76114854 U34038	235379	+	AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor##NM_005242|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC018130|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##U34038|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1	0.984824	CTCF.p2:-3:0.985
chr6	138328190	138328335	reg1015427.p2	8.457	+	TSC_hg19_v1_chr6_-_138189314 AK124173	-138912	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-139725	+	BC051352 AK096362 NM_175747	-512737	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	100306	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	154874	+	BC069109 NM_021635 AF189269 AF189270	211364	-	AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1	0.992601	CTCF.p2:-8:0.993
chr9	139678817	139678933	reg1015409.p1	8.457	+	BC093893 BC093895 AY358618 NM_203347	-19914	-	BC130465 BC132714 AK126902 NM_178469 BC042109	-26163	-	BC026910 AY301269 HQ257933 AY358598 AF303084 BC062746 NM_198946	-35934	-	TSC_hg19_v1_chr9_+_139685795 NM_032928 BC007834	6912	+	TSC_hg19_v1_chr9_+_139685818 CU675821	6959	+	NM_001039374 BC064582 BC137317 BC137318	11926	+	BC093893|LCN15|389812|lipocalin 15##BC093895|LCN15|389812|lipocalin 15##AY358618|LCN15|389812|lipocalin 15##NM_203347|LCN15|389812|lipocalin 15##BC130465|LCN8|138307|lipocalin 8##BC132714|LCN8|138307|lipocalin 8##AK126902|LCN8|138307|lipocalin 8##NM_178469|LCN8|138307|lipocalin 8##BC042109|LCN8|138307|lipocalin 8##AY301269|LCN6|158062|lipocalin 6##HQ257933|LCN6|158062|lipocalin 6##AY358598|LCN6|158062|lipocalin 6##AF303084|LCN6|158062|lipocalin 6##BC062746|LCN6|158062|lipocalin 6##NM_198946|LCN6|158062|lipocalin 6##NM_032928|TMEM141|85014|transmembrane protein 141##BC007834|TMEM141|85014|transmembrane protein 141##NM_001039374|KIAA1984|84960|KIAA1984##BC064582|KIAA1984|84960|KIAA1984##BC137317|KIAA1984|84960|KIAA1984##BC137318|KIAA1984|84960|KIAA1984	0.029095	
chr11	67344352	67344474	reg1018025.p1	8.456	+	AB528802 AF169154 BC018476 NM_016366	-53565	-	BC002850 NM_005851 AK308725 TSC_hg19_v1_chr11_-_67276169	-68274	-	TSC_hg19_v1_chr11_-_67275634 BT006909 CR457050 CR542042 AK310197 AK001498 BC016704 AF089814	-68780	-	NM_000852 TSC_hg19_v1_chr11_+_67351145	6693	+	TSC_hg19_v1_chr11_+_67351285 AY887902 BC010915 BC044846 X15480 U62589 U30897	6876	+	NM_001166102 NM_007103 TSC_hg19_v1_chr11_+_67374428 AF092131 AF053070 BC008146 AK310537 AK223061 AK293522 AK300726 BC015645 AB590249 CR456739 CU677379 CU678877 DQ893236 DQ896566 AK316122	29988	+	AF169154|CABP2|51475|calcium binding protein 2##BC018476|CABP2|51475|calcium binding protein 2##NM_016366|CABP2|51475|calcium binding protein 2##BC002850|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##NM_005851|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BT006909|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR457050|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR542042|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK310197|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK001498|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BC016704|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AF089814|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##NM_000852|GSTP1|2950|glutathione S-transferase pi 1##BC010915|GSTP1|2950|glutathione S-transferase pi 1##BC044846|GSTP1|2950|glutathione S-transferase pi 1##X15480|GSTP1|2950|glutathione S-transferase pi 1##U62589|GSTP1|2950|glutathione S-transferase pi 1##U30897|GSTP1|2950|glutathione S-transferase pi 1##NM_001166102|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_007103|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF092131|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF053070|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC008146|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK310537|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK223061|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK293522|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK300726|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC015645|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##CR456739|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ893236|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ896566|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK316122|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa	0.325721	CTCF.p2:-22:0.326
chr3	12761691	12761807	reg1015465.p1	8.456	+	TSC_hg19_v1_chr3_-_12705626 NM_002880	-56075	-	TSC_hg19_v1_chr3_-_12705617 BC018119 AK226028 AK303561	-56134	-	TSC_hg19_v1_chr3_-_12705590 X03484 AK312248	-56282	-	AK001898 BC020658 AK092470 AX747561 NM_018306	39024	-	GU727621 NM_001162499 NM_012298 BC136592 AB014567	76457	+	NM_001007074	120199	-	NM_002880|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##BC018119|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK226028|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK303561|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##X03484|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK312248|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK001898|TMEM40|55287|transmembrane protein 40##BC020658|TMEM40|55287|transmembrane protein 40##AK092470|TMEM40|55287|transmembrane protein 40##NM_018306|TMEM40|55287|transmembrane protein 40##GU727621|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_001162499|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_012298|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##BC136592|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##AB014567|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_001007074|RPL32|6161|ribosomal protein L32	0.042393	
chr4	82327284	82327415	reg1006137.p2	8.456	+	AB528214 D70899 NM_006259 X94612	-201142	-	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	-375207	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-1070452	+	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	65634	-	TSC_hg19_v1_chr4_-_82393062 AK291459 BC036784 AK303625 AK056257 NM_152545	65711	-	D55671 TSC_hg19_v1_chr4_-_83294725	967326	-	D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B##AK291459|RASGEF1B|153020|RasGEF domain family, member 1B##BC036784|RASGEF1B|153020|RasGEF domain family, member 1B##AK303625|RASGEF1B|153020|RasGEF domain family, member 1B##AK056257|RASGEF1B|153020|RasGEF domain family, member 1B##NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B##D55671|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	0.823031	CTCF.p2:37:0.823
chr6_ssto_hap7	2743252	2743361	reg1015389.p1	8.456	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.778879	CTCF.p2:15:0.779
chr8	26621794	26621895	reg1015453.p1	8.456	+	NM_001244604 TSC_hg19_v1_chr8_+_26435921 AK299077	-185917	+	TSC_hg19_v1_chr8_+_26435604 U17279 AB370194 AB590733 BT006944 CU691152	-186164	+	TSC_hg19_v1_chr8_+_26435468 AK223557 BC056408 D78013 BC010880 AK291287	-186317	+	U02569 AY491775 AY491776 AY491777 AY491778 AY491779 AY491780 AY491781 D25235 D32201 D32202 NM_000680 NM_033302 NM_033303 NM_033304	101074	-	AK311558 TSC_hg19_v1_chr8_-_26724735	102890	-	TSC_hg19_v1_chr8_-_26724764 AK289548	102914	-	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2##AK299077|DPYSL2|1808|dihydropyrimidinase-like 2##U17279|DPYSL2|1808|dihydropyrimidinase-like 2##AB370194|DPYSL2|1808|dihydropyrimidinase-like 2##AK223557|DPYSL2|1808|dihydropyrimidinase-like 2##BC056408|DPYSL2|1808|dihydropyrimidinase-like 2##D78013|DPYSL2|1808|dihydropyrimidinase-like 2##AK291287|DPYSL2|1808|dihydropyrimidinase-like 2##U02569|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491775|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491776|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491777|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491778|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491780|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491781|ADRA1A|148|adrenergic, alpha-1A-, receptor##D25235|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32201|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32202|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_000680|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033302|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033303|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033304|ADRA1A|148|adrenergic, alpha-1A-, receptor##AK289548|ADRA1A|148|adrenergic, alpha-1A-, receptor	0.118034	
chr11	83972878	83973001	reg1017724.p1	8.455	+	AK299778 CR933674 NM_001142702	-579488	-	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	-975534	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	-975906	-	AK294375 AK126776 AK295624 NM_001142700	11337	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	55442	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	661293	-	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)	0.994798	CTCF.p2:1:0.995
chr20	48227945	48228126	reg1000218.p3	8.455	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	-43346	-	BC110572 BC110573 NM_004975	-128856	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-332840	+	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	102195	-	AB004550 TSC_hg19_v1_chr20_-_48330359	102321	-	TSC_hg19_v1_chr20_-_48330471 NM_004776	102431	-	AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.88803	CTCF.p2:-51:0.888
chr2	199522372	199522488	reg1016175.p1	8.455	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	-853060	+	NM_197970 AK302817	-871444	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-872390	-	TSC_hg19_v1_chr2_-_200213802 AK025127	691420	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	798372	-	TSC_hg19_v1_chr2_-_200322238 AJ438951	799820	-	AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2##AJ438951|SATB2|23314|SATB homeobox 2	0.990596	CTCF.p2:5:0.991
chr2	72973029	72973172	reg1018709.p1	8.455	+	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	-598158	-	AK295683 TSC_hg19_v1_chr2_-_72371202	-601901	-	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-1279207	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	80004	-	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	141430	+	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	171553	+	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1	0.9605	CTCF.p2:-3:0.961
chr7	102053085	102053206	reg1015656.p2	8.455	+	NM_024653 TSC_hg19_v1_chr7_+_102036839 AK023964 BC014298 DQ893168 DQ896466 AK294664	-16303	+	TSC_hg19_v1_chr7_+_102023018 AK098134	-30112	+	TSC_hg19_v1_chr7_+_102004338 BC048257 BC066362	-48793	+	TSC_hg19_v1_chr7_+_102073995 NM_001126340 NM_032831	20832	+	TSC_hg19_v1_chr7_+_102074021 AK056497 AK027639 AK300574	20896	+	TSC_hg19_v1_chr7_-_102105305 CU678220 BC002820 BC017096	52088	-	NM_024653|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK023964|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##BC014298|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ893168|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ896466|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK294664|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##NM_001126340|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_032831|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK056497|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK027639|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK300574|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##BC002820|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##BC017096|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)	0.0	
chr1	145589416	145589544	reg1016166.p2	8.454	+	TSC_hg19_v1_chr1_-_145589439 NM_001012758 AK298083	-72	-	TSC_hg19_v1_chr1_+_145576019 AK294231 BC030556 BC001154 AB528548 AB021868	-13435	+	NM_006099 TSC_hg19_v1_chr1_+_145575987 AK027557	-13488	+	TSC_hg19_v1_chr1_-_145610895 U93867 BC002586 NM_006468	21406	-	TSC_hg19_v1_chr1_-_145610937 BC004424	21455	-	TSC_hg19_v1_chr1_+_145611124 AF419857 NM_014455 AK290749 AF542552 BC054049 BC064903 CU691082 EU446627 EU446791 GQ129333 GQ129334	21700	+	NM_001012758|NUDT17|200035|nudix (nucleoside diphosphate linked moiety X)-type motif 17##AK298083|NUDT17|200035|nudix (nucleoside diphosphate linked moiety X)-type motif 17##AK294231|PIAS3|10401|protein inhibitor of activated STAT, 3##BC030556|PIAS3|10401|protein inhibitor of activated STAT, 3##BC001154|PIAS3|10401|protein inhibitor of activated STAT, 3##AB021868|PIAS3|10401|protein inhibitor of activated STAT, 3##NM_006099|PIAS3|10401|protein inhibitor of activated STAT, 3##AK027557|PIAS3|10401|protein inhibitor of activated STAT, 3##U93867|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)##BC002586|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)##NM_006468|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)##BC004424|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)##AF419857|RNF115|27246|ring finger protein 115##NM_014455|RNF115|27246|ring finger protein 115##AK290749|RNF115|27246|ring finger protein 115##AF542552|RNF115|27246|ring finger protein 115##BC054049|RNF115|27246|ring finger protein 115##BC064903|RNF115|27246|ring finger protein 115##EU446627|RNF115|27246|ring finger protein 115##EU446791|RNF115|27246|ring finger protein 115##GQ129333|RNF115|27246|ring finger protein 115##GQ129334|RNF115|27246|ring finger protein 115	0.999801	CTCF.p2:-12:1.000
chr1	51658008	51658113	reg1015590.p1	8.454	+	AK130995 NM_001136508	-90158	+	TSC_hg19_v1_chr1_+_51435925 U17074 CU674290 AB587581 CR450289 DQ891516 DQ894707	-222085	+	NM_078626	-222419	+	TSC_hg19_v1_chr1_+_51701939 AK293047	43867	+	TSC_hg19_v1_chr1_+_51701944 NM_014372	43889	+	BC036670 TSC_hg19_v1_chr1_+_51701971 BC047654	43914	+	AK130995|C1orf185|284546|chromosome 1 open reading frame 185##NM_001136508|C1orf185|284546|chromosome 1 open reading frame 185##U17074|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##CR450289|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##DQ891516|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##DQ894707|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##NM_078626|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##AK293047|RNF11|26994|ring finger protein 11##NM_014372|RNF11|26994|ring finger protein 11##BC036670|RNF11|26994|ring finger protein 11##BC047654|RNF11|26994|ring finger protein 11	0.956019	CTCF.p2:-3:0.956
chr3	182896785	182896965	reg1012610.p1	8.454	+	TSC_hg19_v1_chr3_-_182880523 AB013924 AK313172 BC032940 NM_014398	-16311	-	TSC_hg19_v1_chr3_-_182880435 DQ892118	-16436	-	BC036395 TSC_hg19_v1_chr3_-_182833987	-62952	-	TSC_hg19_v1_chr3_+_182970969 NM_032047 AK074424	74073	+	AB209517 TSC_hg19_v1_chr3_+_182971343	74403	+	TSC_hg19_v1_chr3_+_182971608 AK091474 AX747008	74731	+	AB013924|LAMP3|27074|lysosomal-associated membrane protein 3##AK313172|LAMP3|27074|lysosomal-associated membrane protein 3##BC032940|LAMP3|27074|lysosomal-associated membrane protein 3##NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3##DQ892118|LAMP3|27074|lysosomal-associated membrane protein 3##BC036395|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	0.32361	CTCF.p2:-65:0.324
chr1	202594681	202594779	reg1016340.p2	8.453	+	AB588820 NM_001197131 TSC_hg19_v1_chr1_+_202509319	-85450	+	AB050641 AB050642 NM_032103 NM_032104	-162860	+	TSC_hg19_v1_chr1_+_202317826 AK307591 NM_001167857 NM_001167858 NM_002481 AB003062 AF324888 BC144699 BC110907 BC034430 BC071166	-276857	+	AK094430 NM_001136504	17850	-	BC100814 BC100815 BC100816 BC100817 AK090672 NM_177402 TSC_hg19_v1_chr1_-_202679575	84769	-	TSC_hg19_v1_chr1_-_202776401 AK122752	181714	-	AB588820|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001197131|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050641|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050642|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032103|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032104|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AK307591|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167857|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167858|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_002481|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB003062|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AF324888|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC144699|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC110907|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC034430|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC071166|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AK094430|SYT2|127833|synaptotagmin II##NM_001136504|SYT2|127833|synaptotagmin II##BC100814|SYT2|127833|synaptotagmin II##BC100815|SYT2|127833|synaptotagmin II##BC100816|SYT2|127833|synaptotagmin II##BC100817|SYT2|127833|synaptotagmin II##AK090672|SYT2|127833|synaptotagmin II##NM_177402|SYT2|127833|synaptotagmin II##AK122752|KDM5B|10765|lysine (K)-specific demethylase 5B	0.997351	CTCF.p2:4:0.997
chr22	39833335	39833442	reg1015167.p2	8.453	+	TSC_hg19_v1_chr22_+_39795812 AK291668 AK316004 AK308903 AB591024 CU690722	-37577	+	BC050554 NM_006116 NM_153497 TSC_hg19_v1_chr22_+_39795796 AK296314 BC038582 AF425640 AK312456 U49928	-37618	+	AJ002303 NM_145738	-73214	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	19932	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	20148	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	49902	+	AK291668|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK316004|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK308903|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##BC050554|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_006116|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_153497|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK296314|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##BC038582|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AF425640|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK312456|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##U49928|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AJ002303|SYNGR1|9145|synaptogyrin 1##NM_145738|SYNGR1|9145|synaptogyrin 1##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	0.470974	CTCF.p2:-11:0.471
chr11	60655147	60655270	reg1016145.p1	8.452	+	NM_207341	-20194	+	AF144308 AK291371 AK313849 TSC_hg19_v1_chr11_-_60623424 AB008535 NM_004778	-31776	-	NM_024098 TSC_hg19_v1_chr11_+_60609543 AK025974 AK302329 AK123775 BC001378 DQ892603 DQ895844 DQ501251	-45687	+	CU679057 DQ893003 DQ896249 AB527521 TSC_hg19_v1_chr11_-_60674025 AF086469	18735	-	TSC_hg19_v1_chr11_-_60674060 AJ131186 BC008719 BC018665 BC018698 NM_014502	18843	-	NM_024092 AK303961 TSC_hg19_v1_chr11_+_60681578 AK313913	26271	+	NM_207341|ZP1|22917|zona pellucida glycoprotein 1 (sperm receptor)##AF144308|PTGDR2|11251|prostaglandin D2 receptor 2##AK291371|PTGDR2|11251|prostaglandin D2 receptor 2##AK313849|PTGDR2|11251|prostaglandin D2 receptor 2##AB008535|PTGDR2|11251|prostaglandin D2 receptor 2##NM_004778|PTGDR2|11251|prostaglandin D2 receptor 2##NM_024098|CCDC86|79080|coiled-coil domain containing 86##AK025974|CCDC86|79080|coiled-coil domain containing 86##AK302329|CCDC86|79080|coiled-coil domain containing 86##AK123775|CCDC86|79080|coiled-coil domain containing 86##BC001378|CCDC86|79080|coiled-coil domain containing 86##DQ892603|CCDC86|79080|coiled-coil domain containing 86##DQ895844|CCDC86|79080|coiled-coil domain containing 86##DQ501251|CCDC86|79080|coiled-coil domain containing 86##DQ893003|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##DQ896249|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##AF086469|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##AJ131186|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC008719|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC018665|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC018698|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##NM_014502|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##NM_024092|TMEM109|79073|transmembrane protein 109##AK303961|TMEM109|79073|transmembrane protein 109##AK313913|TMEM109|79073|transmembrane protein 109	0.691238	CTCF.p2:5:0.691
chr16	16288851	16288970	reg1015654.p2	8.452	+	TSC_hg19_v1_chr16_+_16146613 HQ917065	-142292	+	TSC_hg19_v1_chr16_+_16043442 L05628 NM_004996 NM_019862 NM_019898 NM_019899 NM_019900 X78338	-245546	+	AL832498 TSC_hg19_v1_chr16_-_15982471	-306425	-	AF168791 AM711638 AM774324 BC050733 AF076622 BC131732 U66689 NM_001079528 NM_001171 AY078405 AK298295	28410	-	TSC_hg19_v1_chr16_+_16326401 NM_001004067	37487	+	TSC_hg19_v1_chr16_+_16326457 AL832855	37545	+	L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##AL832498|FOPNL|123811|FGFR1OP N-terminal like##AF168791|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM711638|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM774324|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC050733|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AF076622|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC131732|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001079528|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001171|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AY078405|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AK298295|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001004067|NOMO3|408050|NODAL modulator 3##AL832855|NOMO2|283820|NODAL modulator 2	0.55131	CTCF.p2:-12:0.551
chr19	55966205	55966296	reg1015880.p1	8.452	+	NM_001145176	-12021	-	NM_014501 TSC_hg19_v1_chr19_-_55919377	-46896	-	BC066948 M91670 TSC_hg19_v1_chr19_-_55919157 AB062397 BC004236 BC007554 BC065364	-47181	-	BC017344 TSC_hg19_v1_chr19_-_55972980	6713	-	AK311540 TSC_hg19_v1_chr19_-_55973007 AK027122	6759	-	NM_001136201 NM_001136202 NM_024710 TSC_hg19_v1_chr19_-_55973052	6805	-	NM_001145176|SHISA7|729956|shisa homolog 7 (Xenopus laevis)##NM_014501|UBE2S|27338|ubiquitin-conjugating enzyme E2S##BC066948|UBE2S|27338|ubiquitin-conjugating enzyme E2S##M91670|UBE2S|27338|ubiquitin-conjugating enzyme E2S##AB062397|UBE2S|27338|ubiquitin-conjugating enzyme E2S##BC004236|UBE2S|27338|ubiquitin-conjugating enzyme E2S##BC007554|UBE2S|27338|ubiquitin-conjugating enzyme E2S##BC065364|UBE2S|27338|ubiquitin-conjugating enzyme E2S##BC017344|ISOC2|79763|isochorismatase domain containing 2##AK311540|ISOC2|79763|isochorismatase domain containing 2##AK027122|ISOC2|79763|isochorismatase domain containing 2##NM_001136201|ISOC2|79763|isochorismatase domain containing 2##NM_001136202|ISOC2|79763|isochorismatase domain containing 2##NM_024710|ISOC2|79763|isochorismatase domain containing 2	0.973899	CTCF.p2:5:0.974
chr21	43237714	43237819	reg1006573.p4	8.452	+	AK027424 TSC_hg19_v1_chr21_-_43187270	-50499	-	TSC_hg19_v1_chr21_-_43187213 EU832165 EU832259 BC035755 BC110617 BC110618 AB047783 AJ278016 NM_020639	-50544	-	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	-357683	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	61732	-	BC062323 AL833323 NM_199050	109023	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	136317	-	AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4##NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2	0.994068	CTCF.p2:15:0.994
chr3	36946315	36946438	reg1018990.p1	8.452	+	NM_033403	-165025	-	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	-524324	+	BC017805 NM_198399 BC066651 BC036548	-1223917	+	TSC_hg19_v1_chr3_-_36986546 NM_014831	40194	-	AB385383 CU687938 TSC_hg19_v1_chr3_-_37034574	88195	-	TSC_hg19_v1_chr3_-_37034623 BC064696 AF059751 BC012624 AB018309 AY178832 NM_014805	88325	-	NM_033403|DCLK3|85443|doublecortin-like kinase 3##AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain##BC017805|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_198399|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC066651|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC036548|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1##BC064696|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AF059751|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##BC012624|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AB018309|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AY178832|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##NM_014805|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1	0.0	
chr6	132600784	132600959	reg1003689.p1	8.452	+	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	-328457	-	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-471610	+	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	-471710	+	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	121745	-	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	233379	-	BC069083 NM_175057 AY183469	258556	+	BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7##BC069083|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##NM_175057|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183469|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)	0.998115	CTCF.p2:-37:0.998
chr7	128853821	128853946	reg1015579.p2	8.452	+	BC009989 NM_005631	-25171	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-158678	-	TSC_hg19_v1_chr7_-_128695168 BC009923	-158735	-	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	10946	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	154103	+	TSC_hg19_v1_chr7_+_129008062 AK025372	154205	+	BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3##NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2	0.043354	
chr1	6614591	6614764	reg1015319.p1	8.451	+	TSC_hg19_v1_chr1_-_6614597 AK289653 AK091284 AX746895 BC105095 BC112278 BC143646 NM_024654	-57	-	TSC_hg19_v1_chr1_-_6614574 HQ258631 BC110849	-114	-	AK096347 NM_198681 BC036671	-34583	-	BC136515 NM_138697 NM_177540 BC136516 AK292014 AK315805 AK293499	708	+	TSC_hg19_v1_chr1_+_6640055 AK290156 NM_005341 AK312786	25382	+	TSC_hg19_v1_chr1_+_6640095 L16896	25438	+	AK289653|NOL9|79707|nucleolar protein 9##AK091284|NOL9|79707|nucleolar protein 9##BC105095|NOL9|79707|nucleolar protein 9##BC112278|NOL9|79707|nucleolar protein 9##BC143646|NOL9|79707|nucleolar protein 9##NM_024654|NOL9|79707|nucleolar protein 9##HQ258631|NOL9|79707|nucleolar protein 9##BC110849|NOL9|79707|nucleolar protein 9##AK096347|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_198681|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##BC036671|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##BC136515|TAS1R1|80835|taste receptor, type 1, member 1##NM_138697|TAS1R1|80835|taste receptor, type 1, member 1##NM_177540|TAS1R1|80835|taste receptor, type 1, member 1##BC136516|TAS1R1|80835|taste receptor, type 1, member 1##AK292014|TAS1R1|80835|taste receptor, type 1, member 1##AK315805|TAS1R1|80835|taste receptor, type 1, member 1##AK293499|TAS1R1|80835|taste receptor, type 1, member 1##AK290156|ZBTB48|3104|zinc finger and BTB domain containing 48##NM_005341|ZBTB48|3104|zinc finger and BTB domain containing 48##AK312786|ZBTB48|3104|zinc finger and BTB domain containing 48##L16896|ZBTB48|3104|zinc finger and BTB domain containing 48	0.997278	CTCF.p2:-6:0.997
chr6	3933450	3933568	reg1015678.p2	8.450	+	BC001261 NM_012135 Y18503	-83883	+	NM_183373 TSC_hg19_v1_chr6_-_3752248	-181263	-	TSC_hg19_v1_chr6_-_3720312 BC031944	-213199	-	TSC_hg19_v1_chr6_+_4021647 BC034969 NM_003913 AK291244 AB011108 AF283465 AB385345 AY029347	88080	+	BC039349 NM_173563	145914	-	NM_001085401 BC047663 BC066986	145935	+	BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B##NM_183373|PXDC1|221749|PX domain containing 1##BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##BC039349|C6orf146|222826|chromosome 6 open reading frame 146##NM_173563|C6orf146|222826|chromosome 6 open reading frame 146##NM_001085401|C6orf201|404220|chromosome 6 open reading frame 201##BC047663|C6orf201|404220|chromosome 6 open reading frame 201##BC066986|C6orf201|404220|chromosome 6 open reading frame 201	1.053383	CTCF.p2:6:1.000
chr8	104719652	104719776	reg1018277.p1	8.450	+	AK126939 NM_001100117	-206739	+	TSC_hg19_v1_chr8_+_104427659 AK001874	-292049	+	TSC_hg19_v1_chr8_+_104427646 AK001693	-292068	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	111861	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	632338	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	759501	-	AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK001874|DCAF13|25879|DDB1 and CUL4 associated factor 13##AK001693|DCAF13|25879|DDB1 and CUL4 associated factor 13##NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase	0.878738	CTCF.p2:1:0.879
chrX	50731798	50731919	reg1015558.p1	8.450	+	BC117264 BC117266 NM_005448 BC069155 HQ258214	-78100	+	TSC_hg19_v1_chrX_-_50557118 AB033028 BC151240 NM_020717	-174747	-	TSC_hg19_v1_chrX_-_50386679 AY044234	-345181	-	AF469196 NM_153183	343224	+	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	343845	+	AB528198 AM392606 AK001490 TSC_hg19_v1_chrX_-_51239368	507474	-	BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AB033028|SHROOM4|57477|shroom family member 4##BC151240|SHROOM4|57477|shroom family member 4##NM_020717|SHROOM4|57477|shroom family member 4##AY044234|SHROOM4|57477|shroom family member 4##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AM392606|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK001490|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11	0.98335	CTCF.p2:0:0.983
chr22	44963911	44964014	reg1014550.p1	8.449	+	TSC_hg19_v1_chr22_-_44893996 BC030232 NM_032287 AK296479	-69844	-	AB463098 CU013037 CU013325 CR456439 TSC_hg19_v1_chr22_-_44893542	-70473	-	AK126304 TSC_hg19_v1_chr22_-_44893199	-70766	-	TSC_hg19_v1_chr22_+_45064630 AY859540 NM_001017528 NM_001017529	100533	+	NM_001017530 NM_001198721 NM_015366	108725	+	AK091884 TSC_hg19_v1_chr22_+_45072964 AK055848	109008	+	BC030232|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##NM_032287|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##AK296479|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CU013037|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CU013325|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CR456439|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##AK126304|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##AY859540|PRR5|55615|proline rich 5 (renal)##NM_001017528|PRR5|55615|proline rich 5 (renal)##NM_001017529|PRR5|55615|proline rich 5 (renal)##NM_001017530|PRR5|55615|proline rich 5 (renal)##NM_001198721|PRR5|55615|proline rich 5 (renal)##NM_015366|PRR5|55615|proline rich 5 (renal)##AK091884|PRR5|55615|proline rich 5 (renal)##AK055848|PRR5|55615|proline rich 5 (renal)	0.999429	CTCF.p2:22:0.999
chr4	9481235	9481354	reg1017225.p1	8.449	+	AF529414 NM_001040448	-35035	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-116441	+	AF544012 BC100991 NM_001105662	-121186	+	NM_000798	301963	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	541830	-	AK310895 BC018897 NM_001001290 AK096819	560628	-	AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF544012|USP17|391627|ubiquitin specific peptidase 17##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_000798|DRD5|1816|dopamine receptor D5##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	1.115574	CTCF.p2:49:0.375	CTCF.p2:-53:0.740
chr7	48008571	48008714	reg1016631.p2	8.449	+	AB061683 NM_138295	-20589	-	AK024728 NM_025031 BC113679 BC113681 AK092057 AX747337	-173704	+	AK126096 NM_001123065	-313801	+	BT019481 BT019482 CR536552 Y16893 AB463759 BC007013 TSC_hg19_v1_chr7_-_48019149 AK294117 AK290459 AF076844 AF110393	10510	-	TSC_hg19_v1_chr7_-_48019247 NM_004507	10587	-	AK302011 BC026189 AF429967 NM_001030019 NM_152782	60037	-	AB061683|PKD1L1|168507|polycystic kidney disease 1 like 1##NM_138295|PKD1L1|168507|polycystic kidney disease 1 like 1##AK024728|C7orf69|80099|chromosome 7 open reading frame 69##NM_025031|C7orf69|80099|chromosome 7 open reading frame 69##BC113679|C7orf69|80099|chromosome 7 open reading frame 69##BC113681|C7orf69|80099|chromosome 7 open reading frame 69##AK092057|PKD1L1|168507|polycystic kidney disease 1 like 1##AK126096|C7orf65|401335|chromosome 7 open reading frame 65##NM_001123065|C7orf65|401335|chromosome 7 open reading frame 65##BT019481|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BT019482|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##CR536552|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##Y16893|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BC007013|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK294117|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK290459|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF076844|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF110393|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##NM_004507|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK302011|SUN3|256979|Sad1 and UNC84 domain containing 3##BC026189|SUN3|256979|Sad1 and UNC84 domain containing 3##AF429967|SUN3|256979|Sad1 and UNC84 domain containing 3##NM_001030019|SUN3|256979|Sad1 and UNC84 domain containing 3##NM_152782|SUN3|256979|Sad1 and UNC84 domain containing 3	0.953962	CTCF.p2:-11:0.934
chrX	17708359	17708468	reg1013947.p2	8.449	+	AY456992 NM_001136024	-55001	+	TSC_hg19_v1_chrX_+_17393877 GQ988776	-314533	+	TSC_hg19_v1_chrX_+_17393806 BC136415 BC171763	-314602	+	TSC_hg19_v1_chrX_+_17755572 BC026159 NM_001037535 NM_001037536 NM_001037540 NM_006746 AK313993 BC009193 AF160728	47182	+	AK056214 AK298873 AK314631 NM_001172732 NM_001172739 NM_001172743 NM_021785	170992	-	DQ892470 DQ895683 BC096745 BC037301 AK128155 NM_001184767 NM_153346	530535	-	AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##GQ988776|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC136415|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC171763|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC026159|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037535|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037536|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037540|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_006746|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AK313993|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##BC009193|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AF160728|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AK056214|RAI2|10742|retinoic acid induced 2##AK298873|RAI2|10742|retinoic acid induced 2##AK314631|RAI2|10742|retinoic acid induced 2##NM_001172732|RAI2|10742|retinoic acid induced 2##NM_001172739|RAI2|10742|retinoic acid induced 2##NM_001172743|RAI2|10742|retinoic acid induced 2##NM_021785|RAI2|10742|retinoic acid induced 2##DQ892470|BEND2|139105|BEN domain containing 2##DQ895683|BEND2|139105|BEN domain containing 2##BC096745|BEND2|139105|BEN domain containing 2##BC037301|BEND2|139105|BEN domain containing 2##AK128155|BEND2|139105|BEN domain containing 2##NM_001184767|BEND2|139105|BEN domain containing 2##NM_153346|BEND2|139105|BEN domain containing 2	0.999847	CTCF.p2:3:1.000
chr1	234261174	234261297	reg1017452.p1	8.448	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-220623	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-511316	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	-511412	+	TSC_hg19_v1_chr1_+_234350005 BC037878	88771	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	248137	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	353625	-	AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##BC037878|SLC35F3|148641|solute carrier family 35, member F3##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1	0.143282	
chr15	77133335	77133455	reg1017080.p1	8.448	+	TSC_hg19_v1_chr15_+_76629141 AB593133 AK001022 BC012136 NM_145805 BC011967 EU446846	-504233	+	TSC_hg19_v1_chr15_-_76603808 AK292979 NM_000126 NM_001127716	-529581	-	TSC_hg19_v1_chr15_-_76603791 BC029995	-529598	-	BX647285 NM_001145923	20889	-	AF242528 NM_020843	42808	-	TSC_hg19_v1_chr15_-_77197682 BC070197 BC107415 AK056515	64269	-	AB593133|ISL2|64843|ISL LIM homeobox 2##AK001022|ISL2|64843|ISL LIM homeobox 2##BC012136|ISL2|64843|ISL LIM homeobox 2##NM_145805|ISL2|64843|ISL LIM homeobox 2##BC011967|ISL2|64843|ISL LIM homeobox 2##EU446846|ISL2|64843|ISL LIM homeobox 2##AK292979|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##NM_000126|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##NM_001127716|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC029995|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER##NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AF242528|SCAPER|49855|S-phase cyclin A-associated protein in the ER##NM_020843|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC070197|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC107415|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056515|SCAPER|49855|S-phase cyclin A-associated protein in the ER	0.175971	
chr2	122113771	122113883	reg1012857.p1	8.448	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	-71054	-	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	-558934	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-1010030	+	TSC_hg19_v1_chr2_-_122159142 CR749627	45328	-	AK297259 TSC_hg19_v1_chr2_-_122247924	134092	-	TSC_hg19_v1_chr2_-_122407024 BC112940 AK091140 AX746802 BC132723 BC144107 AK299331 AJ288057 NM_001142273 NM_001142274 NM_001207051 NM_015282	293195	-	AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1##AK297259|CLASP1|23332|cytoplasmic linker associated protein 1##BC112940|CLASP1|23332|cytoplasmic linker associated protein 1##AK091140|CLASP1|23332|cytoplasmic linker associated protein 1##BC132723|CLASP1|23332|cytoplasmic linker associated protein 1##BC144107|CLASP1|23332|cytoplasmic linker associated protein 1##AK299331|CLASP1|23332|cytoplasmic linker associated protein 1##AJ288057|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142273|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142274|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001207051|CLASP1|23332|cytoplasmic linker associated protein 1##NM_015282|CLASP1|23332|cytoplasmic linker associated protein 1	0.996661	CTCF.p2:10:0.997
chr6	134294649	134294783	reg1017595.p1	8.448	+	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	-20371	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	-21352	+	TSC_hg19_v1_chr6_+_134210277 AF035718 AF047419 BC025697	-84446	+	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	78987	-	CU674630 Y10032 AF153609 BC001263 FM205710 TSC_hg19_v1_chr6_-_134496003 AK098509 AK295422 BX649005	201258	-	TSC_hg19_v1_chr6_-_134496010 NM_005627	201303	-	NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1##AF035718|TCF21|6943|transcription factor 21##AF047419|TCF21|6943|transcription factor 21##BC025697|TCF21|6943|transcription factor 21##AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##Y10032|SGK1|6446|serum/glucocorticoid regulated kinase 1##AF153609|SGK1|6446|serum/glucocorticoid regulated kinase 1##BC001263|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205710|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK098509|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK295422|SGK1|6446|serum/glucocorticoid regulated kinase 1##BX649005|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_005627|SGK1|6446|serum/glucocorticoid regulated kinase 1	0.937589	CTCF.p2:-6:0.938
chr8	125438351	125438471	reg1015516.p3	8.448	+	TSC_hg19_v1_chr8_-_125384925 BC041379 NM_194291	-53459	-	BC101502 BC101506 AK057332 TSC_hg19_v1_chr8_-_125183771	-254673	-	AB196633 NM_001039112	-574185	+	TSC_hg19_v1_chr8_+_125463060 NM_017956 AK225083 AK000779 AK222727 BC011713 BC003057	24661	+	TSC_hg19_v1_chr8_-_125486793 CR933665	48366	-	TSC_hg19_v1_chr8_-_125486808 AK075052	48420	-	BC041379|TMEM65|157378|transmembrane protein 65##NM_194291|TMEM65|157378|transmembrane protein 65##BC101502|C8orf78|157376|chromosome 8 open reading frame 78##BC101506|C8orf78|157376|chromosome 8 open reading frame 78##AK057332|C8orf78|157376|chromosome 8 open reading frame 78##AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_017956|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK225083|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK000779|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK222727|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC011713|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC003057|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)	0.990642	CTCF.p2:16:0.991
chr1	37329921	37330051	reg1019098.p1	8.447	+	NM_000760 NM_156039 NM_172313	-381072	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-381502	-	TSC_hg19_v1_chr1_-_36929984 AB049946 AB209905 AK021626 BC031336 AF265439 AK315441 AK302633 NM_031280	-400027	-	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	169789	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	610111	+	TSC_hg19_v1_chr1_+_37940140 AK026884	610164	+	NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AB049946|MRPS15|64960|mitochondrial ribosomal protein S15##AB209905|MRPS15|64960|mitochondrial ribosomal protein S15##AK021626|MRPS15|64960|mitochondrial ribosomal protein S15##BC031336|MRPS15|64960|mitochondrial ribosomal protein S15##AF265439|MRPS15|64960|mitochondrial ribosomal protein S15##AK315441|MRPS15|64960|mitochondrial ribosomal protein S15##AK302633|MRPS15|64960|mitochondrial ribosomal protein S15##NM_031280|MRPS15|64960|mitochondrial ribosomal protein S15##AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.849365	CTCF.p2:-3:0.849
chr1	65675092	65675209	reg1011649.p2	8.447	+	TSC_hg19_v1_chr1_+_65613971 BC040224 BC136886 BC136887 BC148270 CR456830 CU688216 DQ892294 DQ895494	-61120	+	TSC_hg19_v1_chr1_+_65613835 NM_013410 AK025926 AK313611 X60673	-61302	+	TSC_hg19_v1_chr1_+_65613263 NM_203464 BC146653 BC016180 AK309057 BC066944 NM_001005353	-61789	+	TSC_hg19_v1_chr1_+_65720144 AK123450 BC051722	44969	+	AK296408 NM_014787 AB007942	55279	+	BC140007 NM_001198683 NM_017526 TSC_hg19_v1_chr1_+_65886266	211052	+	BC040224|AK4|205|adenylate kinase 4##BC136886|AK4|205|adenylate kinase 4##BC136887|AK4|205|adenylate kinase 4##BC148270|AK4|205|adenylate kinase 4##CR456830|AK4|205|adenylate kinase 4##DQ892294|AK4|205|adenylate kinase 4##DQ895494|AK4|205|adenylate kinase 4##NM_013410|AK4|205|adenylate kinase 4##AK025926|AK4|205|adenylate kinase 4##AK313611|AK4|205|adenylate kinase 4##X60673|AK4|205|adenylate kinase 4##NM_203464|AK4|205|adenylate kinase 4##BC146653|AK4|205|adenylate kinase 4##BC016180|AK4|205|adenylate kinase 4##AK309057|AK4|205|adenylate kinase 4##BC066944|AK4|205|adenylate kinase 4##NM_001005353|AK4|205|adenylate kinase 4##AK123450|LOC645195|645195|uncharacterized LOC645195##BC051722|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##BC140007|LEPROT|54741|leptin receptor overlapping transcript##NM_001198683|LEPROT|54741|leptin receptor overlapping transcript##NM_017526|LEPROT|54741|leptin receptor overlapping transcript	0.88903	CTCF.p2:-4:0.889
chr4	165918648	165918753	reg1014429.p2	8.447	+	BC089393 NM_001012414	-19883	-	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	-40549	+	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	-40598	+	AK093201 AX747987 NM_152620	34450	+	CU690322 BC036301 BX648915 BX538029 TSC_hg19_v1_chr4_-_166033990	115261	-	TSC_hg19_v1_chr4_-_166034013 NM_001100389	115325	-	BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##AK093201|TRIM60|166655|tripartite motif containing 60##NM_152620|TRIM60|166655|tripartite motif containing 60##BC036301|TMEM192|201931|transmembrane protein 192##BX648915|TMEM192|201931|transmembrane protein 192##BX538029|TMEM192|201931|transmembrane protein 192##NM_001100389|TMEM192|201931|transmembrane protein 192	0.327842	CTCF.p2:5:0.328
chr12	27856707	27856850	reg1018075.p1	8.446	+	NM_001029874 BC140921 AY662682	-7315	+	NM_001198915 NM_001198916 NM_003622 NM_177444 TSC_hg19_v1_chr12_+_27677138 BC022873 BC001560 AK294267 AB033056 BC050281 AB049149 AK314350 AF034802 BC046159	-179643	+	NM_001145010	-237036	+	NM_001190864 NM_021821 TSC_hg19_v1_chr12_+_27863756 AF182422	6954	+	TSC_hg19_v1_chr12_+_27863764 BC015862 AK075378 AK075515 BC109372 BC063515 BC028346	6996	+	NM_001146221	67430	-	NM_001029874|REP15|387849|RAB15 effector protein##BC140921|REP15|387849|RAB15 effector protein##AY662682|REP15|387849|RAB15 effector protein##NM_001198915|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_001198916|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_003622|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_177444|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC022873|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC001560|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK294267|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB033056|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC050281|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB049149|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK314350|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AF034802|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC046159|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_001145010|C12orf70|341346|chromosome 12 open reading frame 70##NM_001190864|MRPS35|60488|mitochondrial ribosomal protein S35##NM_021821|MRPS35|60488|mitochondrial ribosomal protein S35##AF182422|MRPS35|60488|mitochondrial ribosomal protein S35##BC015862|MRPS35|60488|mitochondrial ribosomal protein S35##AK075378|MRPS35|60488|mitochondrial ribosomal protein S35##AK075515|MRPS35|60488|mitochondrial ribosomal protein S35##BC109372|MRPS35|60488|mitochondrial ribosomal protein S35##BC063515|MRPS35|60488|mitochondrial ribosomal protein S35##BC028346|MRPS35|60488|mitochondrial ribosomal protein S35##NM_001146221|MANSC4|100287284|MANSC domain containing 4	0.0	
chr16	89766610	89766750	reg1014902.p1	8.446	+	TSC_hg19_v1_chr16_+_89753098 AB209829 BC017342 AK292351 BC093028 AK296631 AK290485 AF153430 AK312016 BC025301 BC032704	-13571	+	TSC_hg19_v1_chr16_+_89753087 AK298386 NM_001098533 NM_001160367 NM_052987 NM_052988 AK075036 L33264 AK295397	-13601	+	TSC_hg19_v1_chr16_+_89724475 AK125673	-42210	+	TSC_hg19_v1_chr16_-_89768114 BC039608 BC053588 BC027606 NM_152339	1439	-	TSC_hg19_v1_chr16_+_89778259 AK096286	11583	+	TSC_hg19_v1_chr16_-_89787328 AB527115 NM_004913	20647	-	AB209829|CDK10|8558|cyclin-dependent kinase 10##BC017342|CDK10|8558|cyclin-dependent kinase 10##AK292351|CDK10|8558|cyclin-dependent kinase 10##BC093028|CDK10|8558|cyclin-dependent kinase 10##AK296631|CDK10|8558|cyclin-dependent kinase 10##AK290485|CDK10|8558|cyclin-dependent kinase 10##AF153430|CDK10|8558|cyclin-dependent kinase 10##AK312016|CDK10|8558|cyclin-dependent kinase 10##BC025301|CDK10|8558|cyclin-dependent kinase 10##BC032704|CDK10|8558|cyclin-dependent kinase 10##AK298386|CDK10|8558|cyclin-dependent kinase 10##NM_001098533|CDK10|8558|cyclin-dependent kinase 10##NM_001160367|CDK10|8558|cyclin-dependent kinase 10##NM_052987|CDK10|8558|cyclin-dependent kinase 10##NM_052988|CDK10|8558|cyclin-dependent kinase 10##AK075036|CDK10|8558|cyclin-dependent kinase 10##L33264|CDK10|8558|cyclin-dependent kinase 10##AK295397|CDK10|8558|cyclin-dependent kinase 10##AK125673|C16orf55|124045|chromosome 16 open reading frame 55##BC039608|SPATA2L|124044|spermatogenesis associated 2-like##BC053588|SPATA2L|124044|spermatogenesis associated 2-like##BC027606|SPATA2L|124044|spermatogenesis associated 2-like##NM_152339|SPATA2L|124044|spermatogenesis associated 2-like##AK096286|LOC100128881|100128881|uncharacterized LOC100128881##NM_004913|C16orf7|9605|chromosome 16 open reading frame 7	0.179063	
chr17	3838496	3838605	reg1014634.p1	8.446	+	NM_002558	-18591	-	X83688 U45448 BC044657 BC027949 TSC_hg19_v1_chr17_-_3819762 AK310981 AK313264 AF020498	-18802	-	AL136576 NM_032294 NM_172207 TSC_hg19_v1_chr17_-_3796348	-42207	-	AB462957 DQ893317 EU176809 Z69881 TSC_hg19_v1_chr17_-_3867744 AF068220 BC035729 AK292716 NM_005173 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958	29151	-	AB384472 TSC_hg19_v1_chr17_-_4046240	207665	-	TSC_hg19_v1_chr17_-_4046246 AB007859 BC151836 NM_015113	207702	-	NM_002558|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##X83688|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##U45448|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC044657|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC027949|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AK313264|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AF020498|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AL136576|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_032294|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_172207|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	0.998125	CTCF.p2:-13:0.998
chr19	1864868	1864999	reg1016363.p2	8.446	+	TSC_hg19_v1_chr19_-_1863556 NM_031918	-1377	-	TSC_hg19_v1_chr19_-_1863441 AF327440	-1473	-	TSC_hg19_v1_chr19_-_1848471 BC032244 NM_020695	-16472	-	TSC_hg19_v1_chr19_-_1876169 BC067908	11233	-	BC011667 TSC_hg19_v1_chr19_-_1885409	20459	-	BC020512 TSC_hg19_v1_chr19_-_1885459 BC094816 BC071876 BC071644	20512	-	NM_031918|KLF16|83855|Kruppel-like factor 16##AF327440|KLF16|83855|Kruppel-like factor 16##BC032244|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##NM_020695|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC011667|FAM108A1|81926|family with sequence similarity 108, member A1##BC020512|FAM108A1|81926|family with sequence similarity 108, member A1##BC094816|FAM108A1|81926|family with sequence similarity 108, member A1##BC071876|FAM108A1|81926|family with sequence similarity 108, member A1##BC071644|FAM108A1|81926|family with sequence similarity 108, member A1	0.991355	CTCF.p2:-18:0.991
chr6	77571273	77571399	reg1017243.p1	8.446	+	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	-789037	-	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-1112327	+	TSC_hg19_v1_chr6_+_76458926 NM_004999 BX647397 BC012598	-1112420	+	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	601813	-	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	2005919	+	BC064611 TSC_hg19_v1_chr6_-_79675737 AK000712	2104416	-	HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_004999|MYO6|4646|myosin VI##BX647397|MYO6|4646|myosin VI##BC012598|MYO6|4646|myosin VI##BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC064611|PHIP|55023|pleckstrin homology domain interacting protein##AK000712|PHIP|55023|pleckstrin homology domain interacting protein	1.799098	CTCF.p2:-12:0.956	CTCF.p2:15:0.843
chr7	105807281	105807400	reg1016208.p1	8.446	+	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	-54325	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	-54596	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	-54659	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	118022	-	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	118183	-	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	494163	-	EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##X61382|SYPL1|6856|synaptophysin-like 1##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74	0.997735	CTCF.p2:9:0.998
chr14	77114166	77114306	reg1017495.p1	8.445	+	NM_004452	-276547	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-495930	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-495959	+	TSC_hg19_v1_chr14_+_77227817 AK094330	113564	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	114219	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	114816	+	NM_004452|ESRRB|2103|estrogen-related receptor beta##AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1	0.983974	CTCF.p2:1:0.984
chr15	64275571	64275703	reg1013817.p2	8.445	+	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-149497	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-149517	-	TSC_hg19_v1_chr15_-_64126081 U50078	-149553	-	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	62973	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	110460	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	112503	+	AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1	0.09101	
chr3	47879323	47879423	reg1012902.p1	8.445	+	TSC_hg19_v1_chr3_+_47866475 AK002076	-12885	+	AK096791 TSC_hg19_v1_chr3_+_47844627 BC020126 BC038417 BC015029 AB020697 BC063510	-34717	+	BC047335 NM_014966 NM_138615 TSC_hg19_v1_chr3_+_47844624 BC028405 AK291266	-34862	+	TSC_hg19_v1_chr3_-_47934000 AK054696	54657	-	TSC_hg19_v1_chr3_-_47957477 BX649077	78170	-	TSC_hg19_v1_chr3_-_48040260 CU679053 EU831606 EU831693	160931	-	AK002076|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC047335|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##NM_014966|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##NM_138615|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC028405|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK291266|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK054696|MAP4|4134|microtubule-associated protein 4##EU831606|MAP4|4134|microtubule-associated protein 4##EU831693|MAP4|4134|microtubule-associated protein 4	0.983146	CTCF.p2:-15:0.983
chr16	12549257	12549375	reg1014857.p1	8.444	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-478743	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-490232	+	NM_001130007	-538798	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	348335	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	348403	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	446152	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.99528	CTCF.p2:-18:0.995
chr10	103595857	103595967	reg1014659.p1	8.443	+	TSC_hg19_v1_chr10_-_103578213 NM_001142434 NM_012215	-17694	-	TSC_hg19_v1_chr10_-_103578192 BC032591	-17726	-	BC039583 TSC_hg19_v1_chr10_-_103578180	-17733	-	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	3700	-	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	7695	-	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	220000	-	NM_001142434|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##NM_012215|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC032591|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC039583|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76	0.875239	CTCF.p2:10:0.875
chr10	98503826	98504006	reg1015533.p1	8.442	+	BX648550 TSC_hg19_v1_chr10_-_98480272 AK125635 NM_152309	-23675	-	TSC_hg19_v1_chr10_-_98346798 AF269150 BC136788 BC136789 BC144412 NM_020123	-157093	-	TSC_hg19_v1_chr10_-_98346770 AK314348	-157138	-	TSC_hg19_v1_chr10_+_98592020 NM_001170765 NM_001170766 AL832106 AK308356 BC053359	88137	+	TSC_hg19_v1_chr10_-_98592186 AB593180	88284	-	TSC_hg19_v1_chr10_+_98592758 NM_032440 AL834245 AB058698	88812	+	BX648550|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AK125635|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_152309|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3##BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3##AK314348|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor##AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor##BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor##AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor##AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor	0.0	
chr12	39667107	39667251	reg1016653.p1	8.442	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	-367796	-	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-956554	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-5491706	+	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	169820	-	AK314254 NM_005164	346663	-	BC038754 NM_001031748 BC048120 AK097445	352816	+	AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40	0.99973	CTCF.p2:-3:1.000
chr14	50100982	50101140	reg1015027.p1	8.442	+	BC013322 TSC_hg19_v1_chr14_-_50100693 BX248264 BC011400 AK001425	-365	-	TSC_hg19_v1_chr14_+_50087493 NM_002408 BC006390 BC018912 AK075199 AK056167 AK293231 DQ892713 DQ896859	-13354	+	TSC_hg19_v1_chr14_-_50087339 BC003145 BC000741 BC070207 AK311959 AB063609 NM_001001 BC107716	-13717	-	FJ158843 TSC_hg19_v1_chr14_-_50101912	831	-	TSC_hg19_v1_chr14_-_50101963 BX248765 NM_001083908 NM_018139	893	-	AB590929 HQ258453 TSC_hg19_v1_chr14_-_50154933 BC112962 AK293163 AK314963 AF036899 BX248064 BC126218 BC126220	53911	-	BC013322|DNAAF2|55172|dynein, axonemal, assembly factor 2##BX248264|DNAAF2|55172|dynein, axonemal, assembly factor 2##BC011400|DNAAF2|55172|dynein, axonemal, assembly factor 2##AK001425|DNAAF2|55172|dynein, axonemal, assembly factor 2##NM_002408|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##BC006390|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##BC018912|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK075199|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK056167|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK293231|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##DQ892713|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##DQ896859|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##BC003145|RPL36AL|6166|ribosomal protein L36a-like##BC000741|RPL36AL|6166|ribosomal protein L36a-like##BC070207|RPL36AL|6166|ribosomal protein L36a-like##AK311959|RPL36AL|6166|ribosomal protein L36a-like##AB063609|RPL36AL|6166|ribosomal protein L36a-like##NM_001001|RPL36AL|6166|ribosomal protein L36a-like##BC107716|RPL36AL|6166|ribosomal protein L36a-like##FJ158843|DNAAF2|55172|dynein, axonemal, assembly factor 2##BX248765|DNAAF2|55172|dynein, axonemal, assembly factor 2##NM_001083908|DNAAF2|55172|dynein, axonemal, assembly factor 2##NM_018139|DNAAF2|55172|dynein, axonemal, assembly factor 2##HQ258453|POLE2|5427|polymerase (DNA directed), epsilon 2 (p59 subunit)##BC112962|POLE2|5427|polymerase (DNA directed), epsilon 2 (p59 subunit)##AK293163|POLE2|5427|polymerase (DNA directed), epsilon 2 (p59 subunit)##AK314963|POLE2|5427|polymerase (DNA directed), epsilon 2 (p59 subunit)##AF036899|POLE2|5427|polymerase (DNA directed), epsilon 2 (p59 subunit)##BX248064|POLE2|5427|polymerase (DNA directed), epsilon 2 (p59 subunit)##BC126218|POLE2|5427|polymerase (DNA directed), epsilon 2 (p59 subunit)##BC126220|POLE2|5427|polymerase (DNA directed), epsilon 2 (p59 subunit)	0.359568	CTCF.p2:23:0.360
chr19	56117669	56117797	reg1015826.p2	8.442	+	TSC_hg19_v1_chr19_+_56111653 NM_153219 BC067748	-6058	+	BC136512 BC132777 TSC_hg19_v1_chr19_-_56110884 AK027674 NM_032836	-6860	-	TSC_hg19_v1_chr19_-_56092206 AK092772 AX747719 NM_152600	-25519	-	NM_001195605	7225	+	AK074859 AK309967 TSC_hg19_v1_chr19_-_56135933	18199	-	TSC_hg19_v1_chr19_-_56135944 BC065822 NM_203374	18229	-	NM_153219|ZNF524|147807|zinc finger protein 524##BC067748|ZNF524|147807|zinc finger protein 524##BC136512|FIZ1|84922|FLT3-interacting zinc finger 1##BC132777|FIZ1|84922|FLT3-interacting zinc finger 1##AK027674|FIZ1|84922|FLT3-interacting zinc finger 1##NM_032836|FIZ1|84922|FLT3-interacting zinc finger 1##AK092772|ZNF579|163033|zinc finger protein 579##NM_152600|ZNF579|163033|zinc finger protein 579##NM_001195605|ZNF865|100507290|zinc finger protein 865##AK074859|ZNF784|147808|zinc finger protein 784##BC065822|ZNF784|147808|zinc finger protein 784##NM_203374|ZNF784|147808|zinc finger protein 784	0.183753	
chr5	176883484	176883591	reg1015351.p1	8.442	+	NM_001174102 BC021240	-8208	+	BC024233 NM_001174101 NM_030567 TSC_hg19_v1_chr5_+_176873814 BC004261	-9718	+	TSC_hg19_v1_chr5_+_176853676 NM_001004105 NM_001004106 NM_002082 BC009277 L16862 BC017272 AF040751 AF040752 CU677893 CU679285 AB527614	-29779	+	NM_080881	16333	-	TSC_hg19_v1_chr5_-_176900626 U00802 D17530 BC000283 BC007281 BC007567 AK094125 AK225523 AK314645	17083	-	TSC_hg19_v1_chr5_-_176900653 NM_004395	17136	-	NM_001174102|PRR7|80758|proline rich 7 (synaptic)##BC021240|PRR7|80758|proline rich 7 (synaptic)##BC024233|PRR7|80758|proline rich 7 (synaptic)##NM_001174101|PRR7|80758|proline rich 7 (synaptic)##NM_030567|PRR7|80758|proline rich 7 (synaptic)##BC004261|PRR7|80758|proline rich 7 (synaptic)##NM_001004105|GRK6|2870|G protein-coupled receptor kinase 6##NM_001004106|GRK6|2870|G protein-coupled receptor kinase 6##NM_002082|GRK6|2870|G protein-coupled receptor kinase 6##BC009277|GRK6|2870|G protein-coupled receptor kinase 6##L16862|GRK6|2870|G protein-coupled receptor kinase 6##BC017272|GRK6|2870|G protein-coupled receptor kinase 6##AF040751|GRK6|2870|G protein-coupled receptor kinase 6##AF040752|GRK6|2870|G protein-coupled receptor kinase 6##NM_080881|DBN1|1627|drebrin 1##U00802|DBN1|1627|drebrin 1##D17530|DBN1|1627|drebrin 1##BC000283|DBN1|1627|drebrin 1##BC007281|DBN1|1627|drebrin 1##BC007567|DBN1|1627|drebrin 1##AK094125|DBN1|1627|drebrin 1##AK225523|DBN1|1627|drebrin 1##AK314645|DBN1|1627|drebrin 1##NM_004395|DBN1|1627|drebrin 1	1.006944	CTCF.p2:0:0.997
chr5	80007910	80008027	reg1016238.p1	8.442	+	TSC_hg19_v1_chr5_-_79950786 BC003584 BC071996 NM_000791	-57173	-	BC004177 BC011817 BC098436 TSC_hg19_v1_chr5_+_79950543 U61981 BC017273	-57448	+	TSC_hg19_v1_chr5_+_79950481 J04810	-57485	+	TSC_hg19_v1_chr5_+_80256463 BC126112 BC136296 BC143870 NM_006909	248514	+	AF023130 AF181250 TSC_hg19_v1_chr5_+_80256561	248591	+	NM_001099735 NM_001099736 NM_001825 TSC_hg19_v1_chr5_+_80529140 AK313293 BC029140 AK122769	521180	+	BC003584|DHFR|1719|dihydrofolate reductase##BC071996|DHFR|1719|dihydrofolate reductase##NM_000791|DHFR|1719|dihydrofolate reductase##BC004177|MSH3|4437|mutS homolog 3 (E. coli)##BC011817|MSH3|4437|mutS homolog 3 (E. coli)##BC098436|MSH3|4437|mutS homolog 3 (E. coli)##U61981|MSH3|4437|mutS homolog 3 (E. coli)##BC017273|MSH3|4437|mutS homolog 3 (E. coli)##J04810|MSH3|4437|mutS homolog 3 (E. coli)##BC126112|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC136296|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC143870|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_006909|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF023130|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF181250|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_001099735|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001099736|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001825|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK313293|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##BC029140|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK122769|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)	0.97535	CTCF.p2:-11:0.947
chr6_qbl_hap6	4348172	4348305	reg1018763.p1	8.442	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.915682	CTCF.p2:-1:0.916
chr14	106916024	106916143	reg1014179.p2	8.441	+	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 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AY671766 AY671767 AY671769 AY671771 AY671776 AY671781 AY671784 AY885181 AY941889 AY941914 AY941957 DQ005274 DQ005285 DQ100660 DQ100674 DQ100703 DQ100725 DQ100792 DQ100829 DQ100832 DQ100964 DQ926158 DQ926198 DQ926208 DQ926421 DQ926458 DQ926468 DQ926470 DQ926478 DQ926497 DQ926599 DQ926603 EF544907 EF544958 EF544959 EF544973 FJ208782 FJ492903 FJ492909 FJ492910 GU570373 HM152498 HM152511 HM152516 HQ392880 HQ689741 L12192 L23518 L23934 L25293 M26998 M74468 S64473 S66098 S67110 U00497 U00556 U22391 U71103 U89766 U97246 X56592 X87440 Z35492 Z46269 Z46271 Z46272 Z46273 Z46275 Z46277 Z46279 Z46282 Z46304 Z46305 Z46306 Z46307 Z46308 Z46340 Z46341 Z46342 Z49135 Z49140 Z49141 Z49143 Z70604 Z70605 Z70610 Z70616 Z70617 Z70625 Z70626 Z70627 Z70637 Z70638 Z70639 Z70640 Z70641 Z70642 Z70643 Z70644 Z70650 Z74665 Z74695 AY670806 AY670808 AY957532 AY686937 AY957534 DQ535279 DQ535294 DQ535296 DQ535314 DQ535320 DQ535326 DQ535459 EF178028 EF178136 HM996258 M84508 FJ039792 M84512 X54441 AY671298 AY670999 AY671028 AF283780 AF283781 M74018 M74021 AY670983 AY670985 AY670987 AY670989 AY670992 AY670993 AY670995 AY670997 AY670998 AY671018 AY671025 AY671033 AY671043 AY671307 AY671310 AY671046 AY671049 AY671205 AF283784 AY671151 AY671233 AJ579207 AY670982 AY671003 AY671029 AY671050 AY671156 AY671160 AY671171 AY671177 AY671190 AY671199 AY671201 AY671212 AY671226 AY671232 AY671235 AY671236 AY671250 AY671251 AY671261 AY671262 AY671270 AY671272 AY671278 AY671281 AY671287 AY671308 Z47229 AF062101 AF062146 AF062152 AF062158 AF062173 AF062181 AF062183 AF062187 AF062192 AF062196 AF062217 AF062218 AF062250 AJ579203 AY204755 AY204757 AY204759 AY204761 AY671006 AY671008 AY671061 AY671064 AY671168 AY671175 AY671183 AY671200 AY671207 AY671220 AY671238 AY671258 AY671268 AY671275 AY671289 AY671290 AY671303 AY671305 AY671696 AY671705 AY671713 AY671722 AY671727 AY671728 S59161 X64152 X64153 X65904 Z47228 Z47234 Z47241 Z75362 Z75374 Z75376 Z75379 Z75386 Z75389 Z75392 Z75394 Z75398 CU674902 CU678316 BC002963 BC073767 CU675962 BC017356 BC019235 BC001872 BC006180 BX538126 AK301454 TSC_hg19_v1_chr14_-_106830060 AK126280 AK128649 AK127921 CR933690	-86177	-	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 AF044420 AF044422 AF044425 AF044427 AF044442 AF090355 AF099201 AF174074 AF471431 AJ132850 AJ271549 AJ300787 AJ300793 AJ300798 AJ300803 AJ308463 AJ633622 AJ633623 AY028777 AY033265 AY033266 AY033267 AY530317 AY554176 AY640472 AY640475 AY640477 AY640483 AY640501 AY640511 AY640535 AY640539 AY640541 AY640544 AY640549 AY640550 AY640557 AY640558 AY640561 AY640568 AY640569 AY640573 AY640577 AY685306 AY781859 AY846266 AY846267 AY866744 AY941844 AY941856 AY941857 AY941860 AY941863 AY941865 AY941866 AY941868 AY941892 AY941896 AY941898 AY941901 AY941907 AY941913 AY941935 AY941942 AY941950 AY941953 AY941968 AY941970 AY941982 AY941983 AY941985 AY941986 AY941988 AY941989 AY944708 AY944716 AY971015 AY971027 AY971037 AY971078 AY971081 AY971115 AY971120 AY971130 AY971135 DQ065629 DQ065669 DQ065674 DQ065689 DQ065692 DQ065718 DQ065725 DQ431499 DQ431621 DQ431627 DQ840705 DQ840715 DQ840744 DQ926087 DQ926091 DQ926150 DQ926207 DQ926222 DQ926372 DQ926388 DQ926512 DQ926569 DQ926578 DQ926634 EF177978 EF178004 EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 AY866854 AY882579 AY927661 AY941847 AY941848 AY941861 AY941864 AY941867 AY941869 AY941871 AY941872 AY941874 AY941875 AY941893 AY941894 AY941895 AY941897 AY941904 AY941908 AY941922 AY941932 AY941933 AY941934 AY941944 AY941946 AY941951 AY941954 AY941956 AY941963 AY941964 AY941966 AY941967 AY941969 AY944690 AY971127 D83678 D83681 D83684 D83685 D83694 DQ005284 DQ065696 DQ100659 DQ100685 DQ100775 DQ100819 DQ100846 DQ100857 DQ100907 DQ100930 DQ212508 DQ212509 DQ431475 DQ431476 DQ431501 DQ431573 DQ431575 DQ431576 DQ431580 DQ431582 DQ431606 DQ431607 DQ431622 DQ431628 DQ431633 DQ431634 DQ431637 DQ431642 DQ431643 DQ431646 DQ431653 DQ431658 DQ535263 DQ535266 DQ535268 DQ535293 DQ535308 DQ535373 DQ535382 DQ535397 DQ535424 DQ535426 DQ535429 DQ535437 DQ535439 DQ535440 DQ535461 DQ535466 DQ840703 DQ840706 DQ840712 DQ840713 DQ840745 DQ840782 DQ840813 DQ923052 DQ926032 DQ926064 DQ926133 DQ926340 DQ926374 DQ926384 DQ926552 EF177969 EF177975 EF177991 EF178015 EF178075 EF178091 EF178098 EF178099 EF221755 EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	-124789	-	GQ232933 AY003798 FJ840151 FJ873995 EF407840 AM279492 AM279629 HM774186 AY957513 EF633772 AY062305 DQ524058 AF174122 AY944701 DQ065664 DQ065670 DQ065719 DQ065726 DQ926522 EF178118 EF633803 FJ385316 GU570332 HM995173 HM995251 HM995315 HM995321 HM995523 AB021518 AB021527 AF035043 AF471473 AJ579183 DQ535349 DQ535444 GU570331 GU570333 X95661 Z47231 BC092518 TSC_hg19_v1_chr14_-_106926725 BX647160 AK123783 AK097306 AK097329	10476	-	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	22375	+	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	51217	-	AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF174049|SKAP2|8935|src kinase associated phosphoprotein 2##BC002963|IGHM|3507|immunoglobulin heavy constant mu##BC073767|IGHM|3507|immunoglobulin heavy constant mu##BC017356|IGHM|3507|immunoglobulin heavy constant mu##BC019235|IGHM|3507|immunoglobulin heavy constant mu##BC001872|IGHM|3507|immunoglobulin heavy constant mu##BC006180|IGHM|3507|immunoglobulin heavy constant mu##BX538126|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK126280|IGHD|3495|immunoglobulin heavy constant delta##AK128649|IGHD|3495|immunoglobulin heavy constant delta##AK127921|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.869182	CTCF.p2:13:0.815
chr19	12201759	12201896	reg1014377.p1	8.441	+	AK299732 AL832297 AK098117 NM_001136501 BC125185 BC125186 TSC_hg19_v1_chr19_+_12175767	-26187	+	NM_001080404	-38046	-	TSC_hg19_v1_chr19_-_12146530 AK098300 NM_001080411	-55286	-	AK128700 TSC_hg19_v1_chr19_+_12203111 AK124155	1286	+	AL080125 AK023094 BC036714 TSC_hg19_v1_chr19_-_12251166 NM_001203250 NM_021143	49329	-	BC007868 AK096560 AK292455 NM_145233 TSC_hg19_v1_chr19_-_12267555	65719	-	AK299732|ZNF844|284391|zinc finger protein 844##AL832297|ZNF844|284391|zinc finger protein 844##AK098117|ZNF844|284391|zinc finger protein 844##NM_001136501|ZNF844|284391|zinc finger protein 844##BC125185|ZNF844|284391|zinc finger protein 844##BC125186|ZNF844|284391|zinc finger protein 844##NM_001080404|ZNF878|729747|zinc finger protein 878##AK098300|ZNF433|163059|zinc finger protein 433##NM_001080411|ZNF433|163059|zinc finger protein 433##AK128700|ZNF788|388507|zinc finger family member 788##AL080125|ZNF20|7568|zinc finger protein 20##AK023094|ZNF20|7568|zinc finger protein 20##BC036714|ZNF20|7568|zinc finger protein 20##NM_001203250|ZNF20|7568|zinc finger protein 20##NM_021143|ZNF20|7568|zinc finger protein 20##BC007868|ZNF625|90589|zinc finger protein 625##AK096560|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##AK292455|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##NM_145233|ZNF625|90589|zinc finger protein 625	0.997605	CTCF.p2:4:0.998
chr20	49407302	49407408	reg1014673.p1	8.441	+	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	-59286	+	TSC_hg19_v1_chr20_-_49308074 AK124347	-99278	-	AK056792 NM_080829	-153930	-	AF361220 NM_001010974 NM_017843 NM_198799 TSC_hg19_v1_chr20_+_49411542 AK000502 BC038381 BC047337 AJ511266 BC056883	4163	+	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	140368	-	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	167708	-	BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##AF361220|BCAS4|55653|breast carcinoma amplified sequence 4##NM_001010974|BCAS4|55653|breast carcinoma amplified sequence 4##NM_017843|BCAS4|55653|breast carcinoma amplified sequence 4##NM_198799|BCAS4|55653|breast carcinoma amplified sequence 4##AK000502|BCAS4|55653|breast carcinoma amplified sequence 4##BC038381|BCAS4|55653|breast carcinoma amplified sequence 4##BC047337|BCAS4|55653|breast carcinoma amplified sequence 4##AJ511266|BCAS4|55653|breast carcinoma amplified sequence 4##BC056883|BCAS4|55653|breast carcinoma amplified sequence 4##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit	0.761902	CTCF.p2:-14:0.762
chr21	38349419	38349556	reg1013208.p1	8.441	+	TSC_hg19_v1_chr21_-_38338991 AK307940 NM_001242784	-10628	-	NM_005069 NM_009586 BC110444	-277482	+	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	-278047	+	AJ001864 TSC_hg19_v1_chr21_-_38352974	3463	-	TSC_hg19_v1_chr21_-_38353235 NM_001242785	3753	-	TSC_hg19_v1_chr21_-_38362512 BC060787 D23672 NM_000411	13193	-	AK307940|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_001242784|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_005069|SIM2|6493|single-minded homolog 2 (Drosophila)##NM_009586|SIM2|6493|single-minded homolog 2 (Drosophila)##BC110444|SIM2|6493|single-minded homolog 2 (Drosophila)##AJ001864|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_001242785|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##BC060787|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##D23672|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_000411|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)	1.104956	CTCF.p2:13:0.933
chr10	87307937	87308066	reg1015596.p2	8.440	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-1123306	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-1176383	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-1219607	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	818262	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	973493	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	973529	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.670092	CTCF.p2:-17:0.658
chr12	34371493	34371600	reg1015582.p2	8.440	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-196073	+	TSC_hg19_v1_chr12_+_34175402 BC022336	-196160	+	AJ312278 NM_032834	-196331	+	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	4339079	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	4927837	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	5465453	-	BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC022336|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AJ312278|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_032834|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A	0.234477	CTCF.p2:2:0.220
chr20	34802745	34802846	reg1015673.p1	8.440	+	TSC_hg19_v1_chr20_+_34742659 NM_012156 AB002336	-60130	+	CR936825 NM_177996	-102493	+	TSC_hg19_v1_chr20_+_34680631 AK096848 AK299817 AK126875 BC040259	-122144	+	TSC_hg19_v1_chr20_+_34824399 AL117419	21594	+	TSC_hg19_v1_chr20_+_34824402 BC001751 BC019311 NM_015511	21628	+	TSC_hg19_v1_chr20_+_34894262 AB023181	91460	+	NM_012156|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AB002336|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##CR936825|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##NM_177996|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK096848|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK299817|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK126875|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##BC040259|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AL117419|C20orf4|25980|chromosome 20 open reading frame 4##BC001751|C20orf4|25980|chromosome 20 open reading frame 4##BC019311|C20orf4|25980|chromosome 20 open reading frame 4##NM_015511|C20orf4|25980|chromosome 20 open reading frame 4##AB023181|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4	0.077796	
chrX	100718016	100718141	reg1016681.p1	8.440	+	TSC_hg19_v1_chrX_+_100663231 U01923	-54823	+	AK298133 TSC_hg19_v1_chrX_+_100663213	-54859	+	TSC_hg19_v1_chrX_+_100663209 AK294144 BC030103	-54870	+	TSC_hg19_v1_chrX_+_100805532 AB039670 NM_016608 CR749609 AK222578 AK074785 BC002691 AF248963	87423	+	TSC_hg19_v1_chrX_-_100872931 BC007677 NM_001009584 NM_001184768 NM_019007	154880	-	TSC_hg19_v1_chrX_+_100878175 AK291225 NM_016607 NM_177947 BX647802 AF208859 AK222655 AB039669 BC005194 CR933656	160063	+	U01923|HNRNPH2|3188|heterogeneous nuclear ribonucleoprotein H2 (H')##AK298133|HNRNPH2|3188|heterogeneous nuclear ribonucleoprotein H2 (H')##AK294144|HNRNPH2|3188|heterogeneous nuclear ribonucleoprotein H2 (H')##AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1##NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1##CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1##AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1##AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1##BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1##AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1##BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6##NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6##NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6##NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6##AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3##BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3##AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3##AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3##BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3##CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3	0.706888	CTCF.p2:-16:0.707
chr10	69280807	69280927	reg1016120.p1	8.439	+	NM_178011 BX640611 AY358315 BC111492	-595052	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-3999626	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-3999705	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	144529	-	AF091606 AK313882 NM_013266	175070	-	CR457184 AF176013 BC017018 AK289537 AF176012 NM_021800 NM_201262	316985	-	NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##CR457184|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176013|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##BC017018|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AK289537|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176012|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_021800|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_201262|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12	0.964566	CTCF.p2:16:0.965
chr14	80679999	80680129	reg1016188.p1	8.439	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	-2160	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	-934360	+	AB018286 BC152457 NM_004796	-1809972	+	AK292210 NM_000793	17332	-	NM_152446	725819	-	BC045834 AK309833 TSC_hg19_v1_chr14_-_81408073	727994	-	BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II##NM_152446|CEP128|145508|centrosomal protein 128kDa##BC045834|CEP128|145508|centrosomal protein 128kDa##AK309833|CEP128|145508|centrosomal protein 128kDa	0.988756	CTCF.p2:-5:0.989
chr20	53597061	53597167	reg1014494.p1	8.439	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-504900	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	-772477	+	TSC_hg19_v1_chr20_+_52824396 NM_002623	-772667	+	NM_080617	982897	-	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	1226673	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	1336910	+	BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##NM_002623|PFDN4|5203|prefoldin subunit 4##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B	0.985155	CTCF.p2:-28:0.985
chr8	81524920	81525079	reg1013510.p1	8.439	+	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-126515	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-441229	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-531970	-	AK131274 NM_001033723	262016	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	499315	-	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	667774	+	AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	0.999917	CTCF.p2:-17:1.000
chr11	67567433	67567553	reg1015205.p2	8.438	+	TSC_hg19_v1_chr11_-_67450557 AB055770	-116947	-	BC007685 NM_001031615	-118809	-	TSC_hg19_v1_chr11_-_67442086 AK309277 NM_000695 AK092464	-125362	-	TSC_hg19_v1_chr11_-_67572800 BC063712 BC110365	5259	-	TSC_hg19_v1_chr11_-_67771527 BC101568 BC105104 BC025669 AJ422142 AJ271326 BC092472 BC033623 NM_030930	204074	-	TSC_hg19_v1_chr11_+_67776039 EF411198 NM_001161473	208538	+	AB055770|RPL37|6167|ribosomal protein L37##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC063712|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC110365|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC101568|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC105104|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC025669|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ422142|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ271326|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC092472|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC033623|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##NM_030930|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##EF411198|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001161473|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1	0.989712	CTCF.p2:-2:0.990
chr6	107004368	107004501	reg1018637.p1	8.438	+	TSC_hg19_v1_chr6_+_106960443 U83115	-44023	+	AK056705 NM_001624	-44705	+	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	-230771	-	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	72846	-	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	73063	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	345038	+	U83115|AIM1|202|absent in melanoma 1##AK056705|AIM1|202|absent in melanoma 1##NM_001624|AIM1|202|absent in melanoma 1##CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203	0.961186	CTCF.p2:5:0.961
chr6	132539364	132539469	reg1016490.p2	8.438	+	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	-267002	-	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-410155	+	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	-410255	+	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	183200	-	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	294834	-	BC069083 NM_175057 AY183469	320011	+	BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7##BC069083|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##NM_175057|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183469|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)	0.970744	CTCF.p2:11:0.971
chr6	8888814	8888946	reg1018344.p1	8.438	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-452992	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-453172	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-786090	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	1523736	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	1526395	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	1526588	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.332177	CTCF.p2:-4:0.332
chrX	51603887	51604014	reg1018219.p1	8.438	+	NM_001005332 TSC_hg19_v1_chrX_+_51546171	-57786	+	TSC_hg19_v1_chrX_+_51486493 NM_018094 AK225671 BC036077 AK298868 AK023155 AK001303	-117439	+	BC009942 TSC_hg19_v1_chrX_-_51239444 NM_018159	-364508	-	TSC_hg19_v1_chrX_+_51636723 NM_001005333 NM_006986 AF258554 AK298574 AK308706 BC014070 AK314053 AK074092 AF217963 AF300328	32753	+	BC063838 BC081566 AL136582 AB040527 AB040528 AB040529 NM_001098800 AK098830 AK289458 AK308365 BC001207 AB058762 NM_001242362 NM_030801 NM_177535 NM_177537	208358	-	NM_001242362 NM_030801 NM_177535 NM_177537 AB058762 BC001207 AK098830 AK289458 AK308365 AB040527 AB040528 AB040529 NM_001098800 AL136582 BC081566 BC063838	324027	+	NM_001005332|MAGED1|9500|melanoma antigen family D, 1##NM_018094|GSPT2|23708|G1 to S phase transition 2##BC036077|GSPT2|23708|G1 to S phase transition 2##AK298868|GSPT2|23708|G1 to S phase transition 2##AK023155|GSPT2|23708|G1 to S phase transition 2##AK001303|GSPT2|23708|G1 to S phase transition 2##BC009942|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018159|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_001005333|MAGED1|9500|melanoma antigen family D, 1##NM_006986|MAGED1|9500|melanoma antigen family D, 1##AF258554|MAGED1|9500|melanoma antigen family D, 1##AK298574|MAGED1|9500|melanoma antigen family D, 1##AK308706|MAGED1|9500|melanoma antigen family D, 1##BC014070|MAGED1|9500|melanoma antigen family D, 1##AK314053|MAGED1|9500|melanoma antigen family D, 1##AK074092|MAGED1|9500|melanoma antigen family D, 1##AF217963|MAGED1|9500|melanoma antigen family D, 1##AF300328|MAGED1|9500|melanoma antigen family D, 1##BC063838|MAGED4B|81557|melanoma antigen family D, 4B##BC081566|MAGED4B|81557|melanoma antigen family D, 4B##AL136582|MAGED4B|81557|melanoma antigen family D, 4B##AB040527|MAGED4B|81557|melanoma antigen family D, 4B##AB040528|MAGED4B|81557|melanoma antigen family D, 4B##AB040529|MAGED4B|81557|melanoma antigen family D, 4B##NM_001098800|MAGED4|728239|melanoma antigen family D, 4##AK098830|MAGED4B|81557|melanoma antigen family D, 4B##AK289458|MAGED4B|81557|melanoma antigen family D, 4B##AK308365|MAGED4B|81557|melanoma antigen family D, 4B##BC001207|MAGED4B|81557|melanoma antigen family D, 4B##AB058762|MAGED4B|81557|melanoma antigen family D, 4B##NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B##NM_030801|MAGED4B|81557|melanoma antigen family D, 4B##NM_177535|MAGED4B|81557|melanoma antigen family D, 4B##NM_177537|MAGED4B|81557|melanoma antigen family D, 4B##NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B##NM_030801|MAGED4B|81557|melanoma antigen family D, 4B##NM_177535|MAGED4B|81557|melanoma antigen family D, 4B##NM_177537|MAGED4B|81557|melanoma antigen family D, 4B##AB058762|MAGED4B|81557|melanoma antigen family D, 4B##BC001207|MAGED4B|81557|melanoma antigen family D, 4B##AK098830|MAGED4B|81557|melanoma antigen family D, 4B##AK289458|MAGED4B|81557|melanoma antigen family D, 4B##AK308365|MAGED4B|81557|melanoma antigen family D, 4B##AB040527|MAGED4B|81557|melanoma antigen family D, 4B##AB040528|MAGED4B|81557|melanoma antigen family D, 4B##AB040529|MAGED4B|81557|melanoma antigen family D, 4B##NM_001098800|MAGED4|728239|melanoma antigen family D, 4##AL136582|MAGED4B|81557|melanoma antigen family D, 4B##BC081566|MAGED4B|81557|melanoma antigen family D, 4B##BC063838|MAGED4B|81557|melanoma antigen family D, 4B	0.998736	CTCF.p2:21:0.999
chr1	65925203	65925329	reg1015038.p2	8.437	+	TSC_hg19_v1_chr1_+_65886400 NM_001003679 NM_001003680 NM_002303 U43168 U66495 U66496 Y12670 AK074841 AK290208 BC056250 AK094801 AK309370 NM_001198681 BC131779 EU832353 EU832438 CR541647 CR541737 U66497	-38904	+	BC140007 NM_001198683 NM_017526 TSC_hg19_v1_chr1_+_65886266	-39064	+	AK296408 NM_014787 AB007942	-194837	+	TSC_hg19_v1_chr1_+_65991358 BC031086 NM_001198687 NM_001198688 NM_001198689	66104	+	TSC_hg19_v1_chr1_+_65991390 U52912 U52913 U52914	66141	+	NM_001037341 CR749667 BC071607 BC036108	332929	+	NM_001003679|LEPR|3953|leptin receptor##NM_001003680|LEPR|3953|leptin receptor##NM_002303|LEPR|3953|leptin receptor##U43168|LEPR|3953|leptin receptor##U66495|LEPR|3953|leptin receptor##U66496|LEPR|3953|leptin receptor##Y12670|LEPROT|54741|leptin receptor overlapping transcript##AK074841|LEPROT|54741|leptin receptor overlapping transcript##AK290208|LEPR|3953|leptin receptor##BC056250|LEPROT|54741|leptin receptor overlapping transcript##AK094801|LEPROT|54741|leptin receptor overlapping transcript##AK309370|LEPROT|54741|leptin receptor overlapping transcript##NM_001198681|LEPROT|54741|leptin receptor overlapping transcript##BC131779|LEPR|3953|leptin receptor##EU832353|LEPROT|54741|leptin receptor overlapping transcript##EU832438|LEPROT|54741|leptin receptor overlapping transcript##CR541647|LEPROT|54741|leptin receptor overlapping transcript##CR541737|LEPROT|54741|leptin receptor overlapping transcript##U66497|LEPR|3953|leptin receptor##BC140007|LEPROT|54741|leptin receptor overlapping transcript##NM_001198683|LEPROT|54741|leptin receptor overlapping transcript##NM_017526|LEPROT|54741|leptin receptor overlapping transcript##AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##BC031086|LEPR|3953|leptin receptor##NM_001198687|LEPR|3953|leptin receptor##NM_001198688|LEPR|3953|leptin receptor##NM_001198689|LEPR|3953|leptin receptor##U52912|LEPR|3953|leptin receptor##U52913|LEPR|3953|leptin receptor##U52914|LEPR|3953|leptin receptor##NM_001037341|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##CR749667|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC071607|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC036108|PDE4B|5142|phosphodiesterase 4B, cAMP-specific	0.997231	CTCF.p2:-9:0.997
chr19	41029289	41029418	reg1018216.p1	8.437	+	AF082075 AF311855 NM_020971	-56266	+	TSC_hg19_v1_chr19_-_40971653 BC109371 AK312137 D26308 NM_000713	-57678	-	TSC_hg19_v1_chr19_-_40950243 BC050643 NM_203344	-79094	-	TSC_hg19_v1_chr19_+_41036379 AF311856 NM_025213	7027	+	TSC_hg19_v1_chr19_+_41036433 AK309418	7078	+	TSC_hg19_v1_chr19_+_41082760 NM_138392 AF258553 AK075057 AK300819	53396	+	AF082075|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AF311855|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_020971|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##BC109371|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##AK312137|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##D26308|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##NM_000713|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##BC050643|SERTAD3|29946|SERTA domain containing 3##NM_203344|SERTAD3|29946|SERTA domain containing 3##AF311856|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_025213|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AK309418|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_138392|SHKBP1|92799|SH3KBP1 binding protein 1##AF258553|SHKBP1|92799|SH3KBP1 binding protein 1##AK075057|SHKBP1|92799|SH3KBP1 binding protein 1##AK300819|SHKBP1|92799|SH3KBP1 binding protein 1	0.926044	CTCF.p2:-7:0.926
chr11	125744524	125744647	reg1017519.p1	8.436	+	AK123042 AK309978 AK311509 NM_001144874	-41375	+	EF426753 NM_001129883 EU703625	-86560	+	BC137190 BC137193 BC144526 AY358105 NM_212555	-95877	-	AK057477 NM_145014	8923	+	AK127394 NM_001134793	12369	+	TSC_hg19_v1_chr11_+_125757594 BC015047	13028	+	AK123042|PATE4|399968|prostate and testis expressed 4##AK311509|PATE4|399968|prostate and testis expressed 4##NM_001144874|PATE4|399968|prostate and testis expressed 4##EF426753|PATE3|100169851|prostate and testis expressed 3##NM_001129883|PATE3|100169851|prostate and testis expressed 3##EU703625|PATE3|100169851|prostate and testis expressed 3##BC137190|PATE2|399967|prostate and testis expressed 2##BC137193|PATE2|399967|prostate and testis expressed 2##BC144526|PATE2|399967|prostate and testis expressed 2##AY358105|PATE2|399967|prostate and testis expressed 2##NM_212555|PATE2|399967|prostate and testis expressed 2##AK057477|HYLS1|219844|hydrolethalus syndrome 1##NM_145014|HYLS1|219844|hydrolethalus syndrome 1##AK127394|HYLS1|219844|hydrolethalus syndrome 1##NM_001134793|HYLS1|219844|hydrolethalus syndrome 1##BC015047|HYLS1|219844|hydrolethalus syndrome 1	0.963667	CTCF.p2:17:0.964
chr19	40164633	40164767	reg1016783.p1	8.436	+	FJ613352 NM_001190441	-18155	+	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	-71515	+	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	-133880	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	30343	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	63939	-	NM_001143832	102533	+	FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##NM_001143832|LEUTX|342900|leucine twenty homeobox	0.018305	
chr1	17980376	17980507	reg1017294.p1	8.435	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	-35576	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	-73426	+	TSC_hg19_v1_chr1_+_17866365 AB046846 NM_018125 AK311076	-114081	+	AK057339 NM_030812 BC028909 U20582	101405	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	453836	+	NM_152375	826982	+	AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AB046846|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_018125|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK311076|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##NM_152375|KLHDC7A|127707|kelch domain containing 7A	0.998904	CTCF.p2:2:0.999
chr17	36131038	36131149	reg1010688.p2	8.435	+	TSC_hg19_v1_chr17_-_36105051 HM116553 HM116554 HM116555 HM116556 AK290131 AK296633 AK298393 BC017714 X58840 NM_000458 NM_001165923	-26042	-	AB528419 BT007126 CR536572 DQ891528 EU176615 TSC_hg19_v1_chr17_-_36104898	-26207	-	TSC_hg19_v1_chr17_-_36003470 AF077033 AK001652 AK093661 AX748248 BC041785 NM_007010	-127616	-	NM_001123391 NM_032258 AK313329 AK302064 BC078140 BC071680 AK301823 AL136860 BC047739	152900	+	BC033670 BC047739 AL136860 AK301823 BC071680 BC078140 AK302064 AK313329 NM_001123391 NM_032258	217532	-	BC067792 TSC_hg19_v1_chr17_-_36413224	282144	-	HM116553|HNF1B|6928|HNF1 homeobox B##HM116554|HNF1B|6928|HNF1 homeobox B##HM116555|HNF1B|6928|HNF1 homeobox B##HM116556|HNF1B|6928|HNF1 homeobox B##AK290131|HNF1B|6928|HNF1 homeobox B##AK296633|HNF1B|6928|HNF1 homeobox B##AK298393|HNF1B|6928|HNF1 homeobox B##BC017714|HNF1B|6928|HNF1 homeobox B##X58840|HNF1B|6928|HNF1 homeobox B##NM_000458|HNF1B|6928|HNF1 homeobox B##NM_001165923|HNF1B|6928|HNF1 homeobox B##BT007126|HNF1B|6928|HNF1 homeobox B##CR536572|HNF1B|6928|HNF1 homeobox B##DQ891528|HNF1B|6928|HNF1 homeobox B##EU176615|HNF1B|6928|HNF1 homeobox B##AF077033|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK001652|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK093661|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC041785|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_007010|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##AK313329|TBC1D3|729873|TBC1 domain family, member 3##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##AK302064|TBC1D3|729873|TBC1 domain family, member 3##AK313329|TBC1D3|729873|TBC1 domain family, member 3##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##BC067792|LOC440434|440434|aminopeptidase puromycin sensitive pseudogene	0.027584	
chr14	103061067	103061193	reg1015552.p1	8.433	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-1969	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	-2132	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-85016	-	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	182689	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	182770	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	327868	+	AF155595|RCOR1|23186|REST corepressor 1##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)	0.047922	
chr12	31516161	31516279	reg1016261.p2	8.432	+	BC000024 NM_001135811 NM_021238 TSC_hg19_v1_chr12_-_31479121 NM_001135812	-37081	-	TSC_hg19_v1_chr12_-_31479085 AF212220	-37119	-	BC071966 TSC_hg19_v1_chr12_-_31479052 BC004462 AK027736 AF087885 AK026932 AL157432	-37162	-	TSC_hg19_v1_chr12_-_31743924 BC068580 NM_144973	227698	-	AK290248 NM_001135864	283873	+	BC039535 NM_173802	295900	+	BC000024|FAM60A|58516|family with sequence similarity 60, member A##NM_001135811|FAM60A|58516|family with sequence similarity 60, member A##NM_021238|FAM60A|58516|family with sequence similarity 60, member A##NM_001135812|FAM60A|58516|family with sequence similarity 60, member A##AF212220|FAM60A|58516|family with sequence similarity 60, member A##BC071966|FAM60A|58516|family with sequence similarity 60, member A##BC004462|FAM60A|58516|family with sequence similarity 60, member A##AF087885|FAM60A|58516|family with sequence similarity 60, member A##AK026932|FAM60A|58516|family with sequence similarity 60, member A##AL157432|FAM60A|58516|family with sequence similarity 60, member A##BC068580|DENND5B|160518|DENN/MADD domain containing 5B##NM_144973|DENND5B|160518|DENN/MADD domain containing 5B##AK290248|METTL20|254013|methyltransferase like 20##NM_001135864|METTL20|254013|methyltransferase like 20##BC039535|METTL20|254013|methyltransferase like 20##NM_173802|METTL20|254013|methyltransferase like 20	0.793177	CTCF.p2:12:0.763
chr17	44899797	44899920	reg1019169.p1	8.431	+	AB464356 AB067628 BC114219 BC112116 BC112118 AY009397 NM_030753	-3837	-	NM_006178 AF135168 AF102846 AK294001 AK294727 AK294886 AK299786 BC030613 AK226078 AK290204 AK316057 U03985	-231781	+	BC020869 AB209344 AF208864 BX647266 NM_001113738 NM_016632	-242811	-	AY358217 AK127615 AB063483 NM_003396 BC064534 AB590853	29116	+	TSC_hg19_v1_chr17_+_45000492 NM_001012511 NM_004287 NM_054022	100629	+	TSC_hg19_v1_chr17_+_45000525 AK303650 AK290890 BC009710 AF229796 BC034762 CU679451 AF007548 DQ891461 DQ894638	100687	+	AB067628|WNT3|7473|wingless-type MMTV integration site family, member 3##BC114219|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112116|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112118|WNT3|7473|wingless-type MMTV integration site family, member 3##AY009397|WNT3|7473|wingless-type MMTV integration site family, member 3##NM_030753|WNT3|7473|wingless-type MMTV integration site family, member 3##NM_006178|NSF|4905|N-ethylmaleimide-sensitive factor##AF135168|NSF|4905|N-ethylmaleimide-sensitive factor##AF102846|NSF|4905|N-ethylmaleimide-sensitive factor##AK294001|NSF|4905|N-ethylmaleimide-sensitive factor##AK294727|NSF|4905|N-ethylmaleimide-sensitive factor##AK294886|NSF|4905|N-ethylmaleimide-sensitive factor##AK299786|NSF|4905|N-ethylmaleimide-sensitive factor##BC030613|NSF|4905|N-ethylmaleimide-sensitive factor##AK226078|NSF|4905|N-ethylmaleimide-sensitive factor##AK290204|NSF|4905|N-ethylmaleimide-sensitive factor##AK316057|NSF|4905|N-ethylmaleimide-sensitive factor##U03985|NSF|4905|N-ethylmaleimide-sensitive factor##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AB209344|ARL17A|51326|ADP-ribosylation factor-like 17A##AF208864|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A##AY358217|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AK127615|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AB063483|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_003396|WNT9B|7484|wingless-type MMTV integration site family, member 9B##BC064534|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_001012511|GOSR2|9570|golgi SNAP receptor complex member 2##NM_004287|GOSR2|9570|golgi SNAP receptor complex member 2##NM_054022|GOSR2|9570|golgi SNAP receptor complex member 2##AK290890|GOSR2|9570|golgi SNAP receptor complex member 2##BC009710|GOSR2|9570|golgi SNAP receptor complex member 2##AF229796|GOSR2|9570|golgi SNAP receptor complex member 2##BC034762|GOSR2|9570|golgi SNAP receptor complex member 2##AF007548|GOSR2|9570|golgi SNAP receptor complex member 2##DQ891461|GOSR2|9570|golgi SNAP receptor complex member 2##DQ894638|GOSR2|9570|golgi SNAP receptor complex member 2	0.98076	CTCF.p2:16:0.981
chr19	19665308	19665458	reg1018734.p1	8.431	+	TSC_hg19_v1_chr19_+_19649101 AK314213 AF542080	-16277	+	AK127735 BC068256 NM_153221 TSC_hg19_v1_chr19_+_19649088	-16311	+	NM_001190328 NM_198537 TSC_hg19_v1_chr19_+_19639680 AK126916 BC020948 AB464360 DQ778079 DQ778080	-25678	+	BC033067 BC143092 AK097427 AK301631 BC143588 BC143589 TSC_hg19_v1_chr19_-_19729548 BC141859 NM_025245	64198	-	AF011466 AK316573 BC025695 AF197929 TSC_hg19_v1_chr19_-_19739025 NM_004720	73624	-	BC126436 BC144142 TSC_hg19_v1_chr19_-_19754416 BC032057 AK297220 AF132541	89010	-	AK314213|CILP2|148113|cartilage intermediate layer protein 2##AF542080|CILP2|148113|cartilage intermediate layer protein 2##AK127735|CILP2|148113|cartilage intermediate layer protein 2##BC068256|CILP2|148113|cartilage intermediate layer protein 2##NM_153221|CILP2|148113|cartilage intermediate layer protein 2##NM_001190328|YJEFN3|374887|YjeF N-terminal domain containing 3##NM_198537|YJEFN3|374887|YjeF N-terminal domain containing 3##AK126916|YJEFN3|374887|YjeF N-terminal domain containing 3##BC020948|YJEFN3|374887|YjeF N-terminal domain containing 3##DQ778079|YJEFN3|374887|YjeF N-terminal domain containing 3##DQ778080|YJEFN3|374887|YjeF N-terminal domain containing 3##BC033067|PBX4|80714|pre-B-cell leukemia homeobox 4##BC143092|PBX4|80714|pre-B-cell leukemia homeobox 4##AK097427|PBX4|80714|pre-B-cell leukemia homeobox 4##AK301631|PBX4|80714|pre-B-cell leukemia homeobox 4##BC143588|PBX4|80714|pre-B-cell leukemia homeobox 4##BC143589|PBX4|80714|pre-B-cell leukemia homeobox 4##BC141859|PBX4|80714|pre-B-cell leukemia homeobox 4##NM_025245|PBX4|80714|pre-B-cell leukemia homeobox 4##AF011466|LPAR2|9170|lysophosphatidic acid receptor 2##AK316573|LPAR2|9170|lysophosphatidic acid receptor 2##BC025695|LPAR2|9170|lysophosphatidic acid receptor 2##AF197929|LPAR2|9170|lysophosphatidic acid receptor 2##NM_004720|LPAR2|9170|lysophosphatidic acid receptor 2##BC126436|GMIP|51291|GEM interacting protein##BC144142|GMIP|51291|GEM interacting protein##BC032057|GMIP|51291|GEM interacting protein##AK297220|GMIP|51291|GEM interacting protein##AF132541|GMIP|51291|GEM interacting protein	0.970937	CTCF.p2:-21:0.971
chr14	78283822	78283935	reg1014847.p2	8.430	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-17428	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-56369	-	NM_001173978 NM_174943 BC107147 BC113929 BC113986	-56634	+	AB018286 BC152457 NM_004796	586214	+	NM_001105250 NM_138970 AK056530 BC059368 BC068469	1461826	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	2394026	-	NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001173978|C14orf178|283579|chromosome 14 open reading frame 178##NM_174943|C14orf178|283579|chromosome 14 open reading frame 178##BC107147|C14orf178|283579|chromosome 14 open reading frame 178##BC113929|C14orf178|283579|chromosome 14 open reading frame 178##BC113986|C14orf178|283579|chromosome 14 open reading frame 178##AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II	0.943377	CTCF.p2:8:0.943
chr18	44135829	44135965	reg1017467.p1	8.430	+	AK057232 BC047720 NM_001145473 NM_001173129	-36857	-	AK091537 AK122819 AK127467 AX747044 NM_152470	-221711	+	TSC_hg19_v1_chr18_+_43913942 AK055997	-221965	+	BC041860 AK302484 NM_001145472	3363	-	NM_144612	101098	-	TSC_hg19_v1_chr18_-_44337014 AK094273 NM_013305 AK056270	201164	-	AK057232|LOXHD1|125336|lipoxygenase homology domains 1##BC047720|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145473|LOXHD1|125336|lipoxygenase homology domains 1##NM_001173129|LOXHD1|125336|lipoxygenase homology domains 1##AK091537|RNF165-IT1|147341|RNF165 intronic transcript 1 (non-protein coding)##AK122819|RNF165|494470|ring finger protein 165##AK127467|RNF165|494470|ring finger protein 165##NM_152470|RNF165|494470|ring finger protein 165##AK055997|RNF165|494470|ring finger protein 165##BC041860|LOXHD1|125336|lipoxygenase homology domains 1##AK302484|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145472|LOXHD1|125336|lipoxygenase homology domains 1##NM_144612|LOXHD1|125336|lipoxygenase homology domains 1##AK094273|ST8SIA5|29906|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5##NM_013305|ST8SIA5|29906|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5##AK056270|ST8SIA5|29906|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5	0.980227	CTCF.p2:-11:0.980
chr20	45039708	45039815	reg1015091.p2	8.430	+	TSC_hg19_v1_chr20_-_45035255 AK299318 AL833406 BX648819 NM_133171 NM_182764	-4462	-	TSC_hg19_v1_chr20_-_45035244 AK057032	-4519	-	AB058737 TSC_hg19_v1_chr20_-_45035232	-4545	-	TSC_hg19_v1_chr20_-_45061554 AK293861	21867	-	AL831934 TSC_hg19_v1_chr20_-_45087948	48170	-	AK001331 AK095611 BC024177 NM_018102 NM_199441 BC026321 TSC_hg19_v1_chr20_-_45142199	102434	-	AK299318|ELMO2|63916|engulfment and cell motility 2##AL833406|ELMO2|63916|engulfment and cell motility 2##BX648819|ELMO2|63916|engulfment and cell motility 2##NM_133171|ELMO2|63916|engulfment and cell motility 2##NM_182764|ELMO2|63916|engulfment and cell motility 2##AK057032|ELMO2|63916|engulfment and cell motility 2##AB058737|ELMO2|63916|engulfment and cell motility 2##AK293861|ELMO2|63916|engulfment and cell motility 2##AL831934|ZNF663|100130934|zinc finger protein 663##AK001331|ZNF334|55713|zinc finger protein 334##AK095611|ZNF334|55713|zinc finger protein 334##BC024177|ZNF334|55713|zinc finger protein 334##NM_018102|ZNF334|55713|zinc finger protein 334##NM_199441|ZNF334|55713|zinc finger protein 334##BC026321|ZNF334|55713|zinc finger protein 334	0.998944	CTCF.p2:18:0.999
chr2	121842681	121842781	reg1013895.p2	8.430	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	-287838	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-738934	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-832227	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	200042	-	TSC_hg19_v1_chr2_-_122159142 CR749627	316424	-	AK297259 TSC_hg19_v1_chr2_-_122247924	405188	-	NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1##AK297259|CLASP1|23332|cytoplasmic linker associated protein 1	0.99532	CTCF.p2:-21:0.995
chr8	97340318	97340445	reg1017952.p1	8.429	+	TSC_hg19_v1_chr8_+_97274158 BC004192 BC004390 D14694 NM_014754 DQ891825 DQ895012 CU678608	-66169	+	TSC_hg19_v1_chr8_+_97274141 BC002376	-66242	+	TSC_hg19_v1_chr8_+_97274125 AK293036	-66263	+	TSC_hg19_v1_chr8_+_97505878 NM_002998	165497	+	BC030133 TSC_hg19_v1_chr8_+_97505928 J04621	165531	+	TSC_hg19_v1_chr8_+_97506040 AK025488 AK097839 AK130131 AK298643 AK300067	165654	+	BC004192|PTDSS1|9791|phosphatidylserine synthase 1##BC004390|PTDSS1|9791|phosphatidylserine synthase 1##D14694|PTDSS1|9791|phosphatidylserine synthase 1##NM_014754|PTDSS1|9791|phosphatidylserine synthase 1##DQ891825|PTDSS1|9791|phosphatidylserine synthase 1##DQ895012|PTDSS1|9791|phosphatidylserine synthase 1##BC002376|PTDSS1|9791|phosphatidylserine synthase 1##AK293036|PTDSS1|9791|phosphatidylserine synthase 1##NM_002998|SDC2|6383|syndecan 2##BC030133|SDC2|6383|syndecan 2##J04621|SDC2|6383|syndecan 2##AK025488|SDC2|6383|syndecan 2##AK097839|SDC2|6383|syndecan 2##AK130131|SDC2|6383|syndecan 2##AK298643|SDC2|6383|syndecan 2##AK300067|SDC2|6383|syndecan 2	1.054081	CTCF.p2:18:0.999
chr8	73232185	73232310	reg1016415.p1	8.428	+	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	-244413	-	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-475539	-	AF060154 TSC_hg19_v1_chr8_-_72756646	-475619	-	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	217396	+	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	688865	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	773195	-	NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##AF060154|MSC|9242|musculin##AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84	0.650336	CTCF.p2:-11:0.650
chr1	369465	369599	reg1017679.p1	8.427	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-1884	+	NM_001005484	-300442	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-340127	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	252510	-	TSC_hg19_v1_chr1_-_714015 BC006361	344485	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	393363	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	0.996754	CTCF.p2:6:0.997
chr9	103085302	103085473	reg1016572.p1	8.427	+	TSC_hg19_v1_chr9_+_102861574 BC006370 BC111761 BC112351	-223766	+	AF039217 TSC_hg19_v1_chr9_+_102861540 BC063847 AK304851 BC072429 BC110864	-223847	+	TSC_hg19_v1_chr9_+_102861524 BC041665 NM_014425 NM_183245 AK312795	-223906	+	AK302619 NM_001161584	29465	-	BC030652 TSC_hg19_v1_chr9_-_103115211 AK304869 AK000294 AB060968 AK303662 AK298916 NM_017746	29798	-	BC042955 TSC_hg19_v1_chr9_+_103115352 AK056351	29973	+	BC006370|INVS|27130|inversin##BC111761|INVS|27130|inversin##BC112351|INVS|27130|inversin##AF039217|INVS|27130|inversin##BC063847|INVS|27130|inversin##AK304851|INVS|27130|inversin##BC072429|INVS|27130|inversin##BC041665|INVS|27130|inversin##NM_014425|INVS|27130|inversin##NM_183245|INVS|27130|inversin##AK312795|INVS|27130|inversin##AK302619|TEX10|54881|testis expressed 10##NM_001161584|TEX10|54881|testis expressed 10##BC030652|TEX10|54881|testis expressed 10##AK304869|TEX10|54881|testis expressed 10##AK000294|TEX10|54881|testis expressed 10##AB060968|TEX10|54881|testis expressed 10##AK303662|TEX10|54881|testis expressed 10##AK298916|TEX10|54881|testis expressed 10##NM_017746|TEX10|54881|testis expressed 10	0.986282	CTCF.p2:29:0.986
chr4	127326685	127326792	reg1015789.p1	8.426	+	NM_024582	-1089172	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	-1692924	-	AK026960 BC063856 NM_005841	-3006065	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	1227401	+	TSC_hg19_v1_chr4_+_128651573 NM_031291 AL136857 AY550240 BC022032 AB528294 AM393262 CU692468 AJ863129	1324871	+	TSC_hg19_v1_chr4_+_128703445 BC040560 NM_014278	1376695	+	NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##NM_031291|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AL136857|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AY550240|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC022032|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AM393262|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AJ863129|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC040560|HSPA4L|22824|heat shock 70kDa protein 4-like##NM_014278|HSPA4L|22824|heat shock 70kDa protein 4-like	0.948556	CTCF.p2:0:0.949
chr4	40058424	40058545	reg1016246.p1	8.425	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-78891	-	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	-79146	-	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	-358680	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	48	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	140157	+	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	278961	+	BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9	0.079439	
chr4	53454395	53454499	reg1015588.p2	8.425	+	TSC_hg19_v1_chr4_+_52917480 AK304386 AK057468 BC025396 NM_145263 AK314799	-536914	+	BT019433 CR456810 DQ893140 DQ896425 EU176433 U29586 TSC_hg19_v1_chr4_-_52904447 AK299765 BC020709 AK289892 U31116 NM_000232	-549990	-	CR749811 NM_001024611	-570662	-	AK302438 NM_001134223	68310	-	DQ896764 EU176797 GU455414 AK022614 TSC_hg19_v1_chr4_-_53525461 AK299883 BC037574 AK024318 AK296493 NM_022832	70962	-	TSC_hg19_v1_chr4_+_53578670 BC045566 BC015222 D28589	124217	+	AK304386|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK057468|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BC025396|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##NM_145263|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK314799|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BT019433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR456810|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ893140|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ896425|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##EU176433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U29586|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK299765|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##BC020709|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK289892|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U31116|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##NM_000232|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR749811|LRRC66|339977|leucine rich repeat containing 66##NM_001024611|LRRC66|339977|leucine rich repeat containing 66##AK302438|USP46|64854|ubiquitin specific peptidase 46##NM_001134223|USP46|64854|ubiquitin specific peptidase 46##DQ896764|USP46|64854|ubiquitin specific peptidase 46##EU176797|USP46|64854|ubiquitin specific peptidase 46##GU455414|USP46|64854|ubiquitin specific peptidase 46##AK022614|USP46|64854|ubiquitin specific peptidase 46##AK299883|USP46|64854|ubiquitin specific peptidase 46##BC037574|USP46|64854|ubiquitin specific peptidase 46##AK024318|USP46|64854|ubiquitin specific peptidase 46##AK296493|USP46|64854|ubiquitin specific peptidase 46##NM_022832|USP46|64854|ubiquitin specific peptidase 46##BC045566|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)##BC015222|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)##D28589|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)	0.998374	CTCF.p2:1:0.998
chr5	10701760	10701837	reg1013828.p1	8.425	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-137356	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-259646	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-259795	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	59461	-	TSC_hg19_v1_chr5_-_10761341 BC002726	59544	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	59601	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.244437	CTCF.p2:-23:0.244
chr15	88817898	88818007	reg1016291.p1	8.424	+	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	-17986	-	NM_152336	-2132711	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-2479757	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	192676	-	AB049944 NM_022839 NM_176805	192731	+	TSC_hg19_v1_chr15_+_89010935 BC032378 BC012489 AK027059 AK026165 AK222933 AK315407 AK223152 BC000200 CU680342 CU689362 DQ891586 DQ894780 BC009451	192974	+	NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11##BC032378|MRPS11|64963|mitochondrial ribosomal protein S11##BC012489|MRPS11|64963|mitochondrial ribosomal protein S11##AK027059|MRPS11|64963|mitochondrial ribosomal protein S11##AK026165|MRPS11|64963|mitochondrial ribosomal protein S11##AK222933|MRPS11|64963|mitochondrial ribosomal protein S11##AK315407|MRPS11|64963|mitochondrial ribosomal protein S11##AK223152|MRPS11|64963|mitochondrial ribosomal protein S11##BC000200|MRPS11|64963|mitochondrial ribosomal protein S11##DQ891586|MRPS11|64963|mitochondrial ribosomal protein S11##DQ894780|MRPS11|64963|mitochondrial ribosomal protein S11##BC009451|MRPS11|64963|mitochondrial ribosomal protein S11	0.998159	CTCF.p2:9:0.998
chr3	113557557	113557661	reg1014997.p1	8.424	+	TSC_hg19_v1_chr3_+_113465913 BC013138 AF113129	-91685	+	TSC_hg19_v1_chr3_+_113465902 AK314779	-91705	+	TSC_hg19_v1_chr3_+_113465881 NM_001690 AK293804	-91734	+	BC035040 NM_017577 TSC_hg19_v1_chr3_+_113557732 AK293884 AK292846	102	+	AK304142 NM_001172105 AY358725 AK292964	58750	+	TSC_hg19_v1_chr3_+_113666756 BC035230 NM_173570 AK127996 AK127025	109118	+	BC013138|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##AF113129|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##AK314779|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##NM_001690|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##AK293804|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##BC035040|GRAMD1C|54762|GRAM domain containing 1C##NM_017577|GRAMD1C|54762|GRAM domain containing 1C##AK293884|GRAMD1C|54762|GRAM domain containing 1C##AK292846|GRAMD1C|54762|GRAM domain containing 1C##AK304142|GRAMD1C|54762|GRAM domain containing 1C##NM_001172105|GRAMD1C|54762|GRAM domain containing 1C##AY358725|GRAMD1C|54762|GRAM domain containing 1C##AK292964|GRAMD1C|54762|GRAM domain containing 1C##BC035230|ZDHHC23|254887|zinc finger, DHHC-type containing 23##NM_173570|ZDHHC23|254887|zinc finger, DHHC-type containing 23##AK127996|ZDHHC23|254887|zinc finger, DHHC-type containing 23##AK127025|ZDHHC23|254887|zinc finger, DHHC-type containing 23	0.996569	CTCF.p2:-1:0.997
chr8	99395461	99395592	reg1017439.p1	8.424	+	BC132687 BC144055 TSC_hg19_v1_chr8_-_99306600 AK024017 NM_024759	-88927	-	BC011529 NM_015029	-265459	+	TSC_hg19_v1_chr8_+_99129543 NM_001145860 NM_001145861 X99302 AK291434	-265988	+	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	43820	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	442321	-	NM_001142462 NM_053001 TSC_hg19_v1_chr8_+_99956669 AK074518 AK291491 AK310994 BC016936 AY038073	561131	+	BC132687|NIPAL2|79815|NIPA-like domain containing 2##BC144055|NIPAL2|79815|NIPA-like domain containing 2##AK024017|NIPAL2|79815|NIPA-like domain containing 2##NM_024759|NIPAL2|79815|NIPA-like domain containing 2##BC011529|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015029|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001145860|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001145861|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##X99302|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##AK291434|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3##NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)##NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)##AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)##AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)##AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)##BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)##AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)	0.24785	CTCF.p2:-11:0.248
chr15	23494971	23495087	reg1016257.p1	8.423	+	TSC_hg19_v1_chr15_-_23378229 AF041081 AF041080	-116785	-	TSC_hg19_v1_chr15_-_23378205 AK308640	-116839	-	DQ309040 BC048987 TSC_hg19_v1_chr15_-_23208467	-286618	-	NM_005664	315424	+	AK309383 TSC_hg19_v1_chr15_+_23810820 BC044639 BC013970 BC070293 EU446987 CU692226	315839	+	NM_019066 TSC_hg19_v1_chr15_-_23893004	397975	-	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041080|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AK308640|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##DQ309040|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC048987|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##NM_005664|MKRN3|7681|makorin ring finger protein 3##BC044639|MKRN3|7681|makorin ring finger protein 3##BC070293|MKRN3|7681|makorin ring finger protein 3##EU446987|MKRN3|7681|makorin ring finger protein 3##NM_019066|MAGEL2|54551|MAGE-like 2	0.974797	CTCF.p2:-13:0.975
chr20	9597836	9597957	reg1017114.p1	8.423	+	TSC_hg19_v1_chr20_+_9495437 CU690786	-102434	+	AL121740 BC050727 TSC_hg19_v1_chr20_+_9495326	-102584	+	TSC_hg19_v1_chr20_+_9494997 AK295336 AK316114 NM_001199897 NM_012261	-102897	+	TSC_hg19_v1_chr20_-_9819519 AB040812 BC024179 AK291401 AK307926 AK095674 AK315820 NM_020341 NM_177990 AB033090 AX776013	221671	-	NM_022096 NM_198798 AK097689 TSC_hg19_v1_chr20_+_10015744 BC022878 BC028189 BC011591	417836	+	TSC_hg19_v1_chr20_+_10199575 NM_003081 NM_130811 AK094560 AK098347 D21267 AK223617 AK314359 AK289647 BC010647 BX647443 AK098767 L19760 L19761	601631	+	AL121740|LAMP5|24141|lysosomal-associated membrane protein family, member 5##BC050727|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AK295336|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AK316114|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_001199897|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_012261|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AB040812|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##BC024179|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK291401|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK307926|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK095674|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK315820|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_020341|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_177990|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AB033090|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AX776013|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_022096|ANKRD5|63926|ankyrin repeat domain 5##NM_198798|ANKRD5|63926|ankyrin repeat domain 5##AK097689|ANKRD5|63926|ankyrin repeat domain 5##BC022878|ANKRD5|63926|ankyrin repeat domain 5##BC028189|ANKRD5|63926|ankyrin repeat domain 5##BC011591|ANKRD5|63926|ankyrin repeat domain 5##NM_003081|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_130811|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK094560|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098347|SNAP25|6616|synaptosomal-associated protein, 25kDa##D21267|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK223617|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK314359|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK289647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BC010647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BX647443|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098767|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19760|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19761|SNAP25|6616|synaptosomal-associated protein, 25kDa	0.979576	CTCF.p2:-8:0.980
chr5	170031096	170031218	reg1014221.p1	8.423	+	TSC_hg19_v1_chr5_+_169931023 BC035032 NM_001034837 NM_014592	-100122	+	BC025707 NM_004137 AK313979	-214510	-	TSC_hg19_v1_chr5_+_169816493 AK311026	-214661	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	179597	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	257774	+	TSC_hg19_v1_chr5_+_170289029 AJ271459 AJ288952 AJ288953 AJ288954 AJ288955 BC030953 AF222747 AB527205 AL832980	257865	+	BC035032|KCNIP1|30820|Kv channel interacting protein 1##NM_001034837|KCNIP1|30820|Kv channel interacting protein 1##NM_014592|KCNIP1|30820|Kv channel interacting protein 1##BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17##AJ271459|RANBP17|64901|RAN binding protein 17##AJ288952|RANBP17|64901|RAN binding protein 17##AJ288953|RANBP17|64901|RAN binding protein 17##AJ288954|RANBP17|64901|RAN binding protein 17##AJ288955|RANBP17|64901|RAN binding protein 17##BC030953|RANBP17|64901|RAN binding protein 17##AF222747|RANBP17|64901|RAN binding protein 17##AL832980|RANBP17|64901|RAN binding protein 17	0.979086	CTCF.p2:0:0.979
chr6	27655311	27655424	reg1016029.p1	8.423	+	TSC_hg19_v1_chr6_-_27440879 BC022992 AK123011 AK312804 NM_007149	-214666	-	TSC_hg19_v1_chr6_+_27356537 NM_001076781 AK092633 AK294965 AX747641 BC132797	-298812	+	AF352327 AF336874 BC107050 NM_032030	-362809	+	EU446971 TSC_hg19_v1_chr6_-_27775708 NM_003519 AK312114 BC093759 BC093761	120356	-	BC112254 BC112256 TSC_hg19_v1_chr6_+_27775950 AK311766 BC062305 NM_003509 HQ258047	120574	+	BC007518 TSC_hg19_v1_chr6_+_27777828 AK311991 NM_003536 EU446975 BC096128 BC096129 BC096130 BC143046 BC148243 BC148250	122415	+	BC022992|ZNF184|7738|zinc finger protein 184##AK123011|ZNF184|7738|zinc finger protein 184##AK312804|ZNF184|7738|zinc finger protein 184##NM_007149|ZNF184|7738|zinc finger protein 184##NM_001076781|ZNF391|346157|zinc finger protein 391##AK092633|ZNF391|346157|zinc finger protein 391##AK294965|ZNF391|346157|zinc finger protein 391##BC132797|ZNF391|346157|zinc finger protein 391##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83##EU446971|HIST1H2BL|8340|histone cluster 1, H2bl##NM_003519|HIST1H2BL|8340|histone cluster 1, H2bl##AK312114|HIST1H2BL|8340|histone cluster 1, H2bl##BC093759|HIST1H2BL|8340|histone cluster 1, H2bl##BC093761|HIST1H2BL|8340|histone cluster 1, H2bl##BC112254|HIST1H2AI|8329|histone cluster 1, H2ai##BC112256|HIST1H2AI|8329|histone cluster 1, H2ai##AK311766|HIST1H2AI|8329|histone cluster 1, H2ai##BC062305|HIST1H3F|8968|histone cluster 1, H3f##NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai##HQ258047|HIST1H2AM|8336|histone cluster 1, H2am##BC007518|HIST1H3H|8357|histone cluster 1, H3h##AK311991|HIST1H3H|8357|histone cluster 1, H3h##NM_003536|HIST1H3H|8357|histone cluster 1, H3h##EU446975|HIST1H3H|8357|histone cluster 1, H3h##BC096128|HIST1H3H|8357|histone cluster 1, H3h##BC096129|HIST1H3H|8357|histone cluster 1, H3h##BC096130|HIST1H3H|8357|histone cluster 1, H3h##BC143046|HIST1H3H|8357|histone cluster 1, H3h##BC148243|HIST1H3H|8357|histone cluster 1, H3h##BC148250|HIST1H3H|8357|histone cluster 1, H3h	0.0	
chr12	30439390	30439519	reg1018857.p1	8.422	+	BC042083 NM_175861	-501763	-	TSC_hg19_v1_chr12_-_29936844 GQ865601 NM_001193451	-502684	-	NM_183378	-788836	-	AK302260 NM_001190995	390706	-	U77494 TSC_hg19_v1_chr12_-_30848794	409316	-	TSC_hg19_v1_chr12_-_30848807 NM_006390	409412	-	BC042083|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_175861|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##GQ865601|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_001193451|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_183378|OVCH1|341350|ovochymase 1##AK302260|IPO8|10526|importin 8##NM_001190995|IPO8|10526|importin 8##U77494|IPO8|10526|importin 8##NM_006390|IPO8|10526|importin 8	0.083112	
chr1	236922677	236922811	reg1015424.p1	8.422	+	AK315250 NM_001103 TSC_hg19_v1_chr1_+_236849798 AK297886 M86406 AB209521 BC051770 BC047901 AB590561 CU690840	-72882	+	BC062442 TSC_hg19_v1_chr1_-_236767817 AK095692 NM_018072	-154931	-	TSC_hg19_v1_chr1_+_236687323 AK296061 BC015818 AB209914	-235415	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	35833	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	36091	+	NM_001035 X98330 Y08218	283029	+	AK315250|ACTN2|88|actinin, alpha 2##NM_001103|ACTN2|88|actinin, alpha 2##AK297886|ACTN2|88|actinin, alpha 2##M86406|ACTN2|88|actinin, alpha 2##AB209521|ACTN2|88|actinin, alpha 2##BC051770|ACTN2|88|actinin, alpha 2##BC047901|ACTN2|88|actinin, alpha 2##BC062442|HEATR1|55127|HEAT repeat containing 1##AK095692|HEATR1|55127|HEAT repeat containing 1##NM_018072|HEATR1|55127|HEAT repeat containing 1##AK296061|LGALS8|3964|lectin, galactoside-binding, soluble, 8##BC015818|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AB209914|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)	0.994948	CTCF.p2:-8:0.995
chr7	6023679	6023810	reg1016229.p1	8.422	+	AK314983 BC034495 NM_001099697 NM_173565	-13431	-	BC067810 NM_015622 BC132749 BC132751 AK292326 BC010130 CU679629	-85364	+	BC147028 BC147029 BC113704 BC113706 NM_001097622 CU686830 BC069468 BC069512 BC069550 HQ258718	-103271	+	AB103082 AB103083 AB103085 AB103087 AB587472 U14658 BX537558 TSC_hg19_v1_chr7_-_6048681 BC093921 BC143397 AK312390 BC008400 BC031832 AK294661 NM_000535	24948	-	TSC_hg19_v1_chr7_+_6048883 AK313037 NM_006303 U24169	25128	+	TSC_hg19_v1_chr7_+_6048905 BC013630	25163	+	AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_015622|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC147028|OCM|654231|oncomodulin##BC147029|OCM|654231|oncomodulin##BC113704|OCM|654231|oncomodulin##BC113706|OCM|654231|oncomodulin##NM_001097622|OCM|654231|oncomodulin##BC069468|OCM|654231|oncomodulin##BC069512|OCM|654231|oncomodulin##BC069550|OCM|654231|oncomodulin##HQ258718|OCM|654231|oncomodulin##AB103082|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##AB103083|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##AB103085|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##U14658|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##BX537558|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##BC093921|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##BC143397|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##AK312390|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##BC008400|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##BC031832|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##AK294661|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##NM_000535|PMS2|5395|PMS2 postmeiotic segregation increased 2 (S. cerevisiae)##AK313037|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2##NM_006303|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2##U24169|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2##BC013630|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	0.0	
chr17_ctg5_hap1	87731	87871	reg1016430.p1	8.421	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.954926	CTCF.p2:-2:0.955
chr5	33588993	33589117	reg1016953.p1	8.421	+	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	-147916	+	AK292346 TSC_hg19_v1_chr5_+_33440874 NM_152295	-148199	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	-877250	+	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	302990	-	TSC_hg19_v1_chr5_-_33892294 AJ250725	303240	-	D88437 NM_016568	347435	+	AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##AK292346|TARS|6897|threonyl-tRNA synthetase##NM_152295|TARS|6897|threonyl-tRNA synthetase##BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##D88437|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##NM_016568|RXFP3|51289|relaxin/insulin-like family peptide receptor 3	0.259224	CTCF.p2:-9:0.259
chr6	42228824	42228919	reg1013552.p1	8.421	+	TSC_hg19_v1_chr6_-_42185603 NM_018141	-43254	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-43271	-	TSC_hg19_v1_chr6_-_42185597 AK316599 BC012560	-43274	-	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	190952	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	302879	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	302906	+	NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##AK316599|MRPS10|55173|mitochondrial ribosomal protein S10##BC012560|MRPS10|55173|mitochondrial ribosomal protein S10##AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.763314	CTCF.p2:-26:0.763
chr1	14133844	14133961	reg1014560.p1	8.420	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-57961	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-57979	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-58017	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	791292	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	1116817	+	AY505121 NM_001018001	1122393	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.0	
chr1	620094	620230	reg1018176.p1	8.420	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-252514	+	NM_001005484	-551072	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-590757	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	1880	-	TSC_hg19_v1_chr1_-_714015 BC006361	93855	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	142733	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	0.996754	CTCF.p2:-7:0.997
chr21	27234967	27235090	reg1015574.p2	8.420	+	TSC_hg19_v1_chr21_-_27107965 NM_001003696 NM_001003697 NM_001003701 NM_001003703 NM_001685 BC001178	-127057	-	U13044 TSC_hg19_v1_chr21_+_27107734	-127262	+	TSC_hg19_v1_chr21_+_27107724 BC035031 D13318 AK223164	-127330	+	S41242 S41243 TSC_hg19_v1_chr21_-_27253245	18195	-	TSC_hg19_v1_chr21_-_27372469 X06981 X06982	137451	-	TSC_hg19_v1_chr21_-_27423435 BC018937	188415	-	NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa##BC035031|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa##D13318|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa##AK223164|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa##S41243|APP|351|amyloid beta (A4) precursor protein##X06981|APP|351|amyloid beta (A4) precursor protein##X06982|APP|351|amyloid beta (A4) precursor protein	0.788736	CTCF.p2:0:0.789
chr2	207646395	207646518	reg1016507.p1	8.420	+	AK021557 TSC_hg19_v1_chr2_+_207630326 AK001516 AF223470 AL833877	-16133	+	NM_001136193 NM_001136194 NM_014929	-16345	+	AK292386 BC033509 BC088356 AK302250 AK309144 NM_001039845 AK308257	-16426	-	BC112076 BC112078 NM_173077 AJ422118	157844	+	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	384200	-	BC012919 TSC_hg19_v1_chr2_-_208031680	385169	-	AK021557|FASTKD2|22868|FAST kinase domains 2##AK001516|FASTKD2|22868|FAST kinase domains 2##AF223470|FASTKD2|22868|FAST kinase domains 2##AL833877|FASTKD2|22868|FAST kinase domains 2##NM_001136193|FASTKD2|22868|FAST kinase domains 2##NM_001136194|FASTKD2|22868|FAST kinase domains 2##NM_014929|FASTKD2|22868|FAST kinase domains 2##AK292386|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##BC033509|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##BC088356|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK302250|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK309144|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##NM_001039845|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK308257|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)	0.829133	CTCF.p2:-13:0.829
chr7	123811277	123811387	reg1014218.p1	8.420	+	TSC_hg19_v1_chr7_-_123673486 NM_001136002	-137828	-	AK292229 NM_001174045 NM_001174046 AY920280 AY920281	-245412	+	NM_001174044 NM_003117 NM_153189 AY920278 AY920279 S67798 BC026163	-246006	+	AF502281 CU691802 AB464545 AF017262 TSC_hg19_v1_chr7_-_124405121	593743	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	594464	-	BC130600 BC130604 NM_001024603	619470	-	NM_001136002|TMEM229A|730130|transmembrane protein 229A##AK292229|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174045|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174046|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920280|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920281|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174044|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_003117|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_153189|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920278|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920279|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##S67798|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##BC026163|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AF502281|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##AF017262|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872	0.976852	CTCF.p2:-2:0.977
chr12	99092792	99092891	reg1015563.p1	8.419	+	AK307509 TSC_hg19_v1_chr12_+_99039067 AF013263 NM_001160 NM_013229 NM_181861 NM_181868 NM_181869	-53844	+	TSC_hg19_v1_chr12_-_99038755 AK123069	-54036	-	TSC_hg19_v1_chr12_-_99038567 CU691338 BC058933 AK055613 BC107572 BC051372 AJ539425 AJ539426 AJ539427 BC029415 NM_153687 NM_201612 NM_201613	-54333	-	AY356353 AK315954 AM980945 AK294994 TSC_hg19_v1_chr12_-_99288638 AK295988 NM_001204065 NM_001204079 NM_001204080 NM_001204081	195746	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	455716	-	AK294191 NM_001204067	456026	-	AK307509|APAF1|317|apoptotic peptidase activating factor 1##AF013263|APAF1|317|apoptotic peptidase activating factor 1##NM_001160|APAF1|317|apoptotic peptidase activating factor 1##NM_013229|APAF1|317|apoptotic peptidase activating factor 1##NM_181861|APAF1|317|apoptotic peptidase activating factor 1##NM_181868|APAF1|317|apoptotic peptidase activating factor 1##NM_181869|APAF1|317|apoptotic peptidase activating factor 1##AK123069|IKBIP|121457|IKBKB interacting protein##BC058933|IKBIP|121457|IKBKB interacting protein##AK055613|IKBIP|121457|IKBKB interacting protein##BC107572|IKBIP|121457|IKBKB interacting protein##BC051372|IKBIP|121457|IKBKB interacting protein##AJ539425|IKBIP|121457|IKBKB interacting protein##AJ539426|IKBIP|121457|IKBKB interacting protein##AJ539427|IKBIP|121457|IKBKB interacting protein##BC029415|IKBIP|121457|IKBKB interacting protein##NM_153687|IKBIP|121457|IKBKB interacting protein##NM_201612|IKBIP|121457|IKBKB interacting protein##NM_201613|IKBIP|121457|IKBKB interacting protein##AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	0.971504	CTCF.p2:-3:0.972
chr17	3810925	3811024	reg1015248.p2	8.419	+	AL136576 NM_032294 NM_172207 TSC_hg19_v1_chr17_-_3796348	-14631	-	BC031647 TSC_hg19_v1_chr17_-_3796278 AF425232 BC043487	-14683	-	AF425301 NM_172206	-16938	-	X83688 U45448 BC044657 BC027949 TSC_hg19_v1_chr17_-_3819762 AK310981 AK313264 AF020498	8774	-	NM_002558	8985	-	AB462957 DQ893317 EU176809 Z69881 TSC_hg19_v1_chr17_-_3867744 AF068220 BC035729 AK292716 NM_005173 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958	56727	-	AL136576|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_032294|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_172207|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##BC031647|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##AF425232|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##BC043487|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##AF425301|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_172206|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##X83688|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##U45448|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC044657|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC027949|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AK313264|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AF020498|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##NM_002558|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous	0.3386	CTCF.p2:4:0.339
chrX	19401016	19401101	reg1014021.p1	8.419	+	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	-38976	+	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	-260391	-	TSC_hg19_v1_chrX_-_19002476 NM_000292	-398596	-	NM_001001671	132320	-	TSC_hg19_v1_chrX_-_19689029 AK293237 NM_001184960	287998	-	AK293234 AF542051 TSC_hg19_v1_chrX_-_19817892	416817	-	NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##NM_001001671|MAP3K15|389840|mitogen-activated protein kinase kinase kinase 15##AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1	0.864823	CTCF.p2:1:0.865
chrX	32426655	32426773	reg1016049.p2	8.419	+	L35854 NM_004013 NM_004020 NM_004021 NM_004022 NM_004023	-253129	-	NM_004014 S62617	-900300	-	CU688550 M92650 TSC_hg19_v1_chrX_-_31285072 BC070078 NM_004015 NM_004016 NM_004017 NM_004018 NM_004019 S42206 BC094758 AK299936 BC028720 S38776	-1141680	-	NM_004011 NM_004012	3656	-	NM_004010 S81419 NM_004009 S64152	719829	-	S60972 X14298 AK309142 TSC_hg19_v1_chrX_-_33229631 M18533 BC010932 NM_004006	802836	-	L35854|DMD|1756|dystrophin##NM_004013|DMD|1756|dystrophin##NM_004020|DMD|1756|dystrophin##NM_004021|DMD|1756|dystrophin##NM_004022|DMD|1756|dystrophin##NM_004023|DMD|1756|dystrophin##NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin##M92650|DMD|1756|dystrophin##BC070078|DMD|1756|dystrophin##NM_004015|DMD|1756|dystrophin##NM_004016|DMD|1756|dystrophin##NM_004017|DMD|1756|dystrophin##NM_004018|DMD|1756|dystrophin##NM_004019|DMD|1756|dystrophin##S42206|DMD|1756|dystrophin##BC094758|DMD|1756|dystrophin##AK299936|DMD|1756|dystrophin##BC028720|DMD|1756|dystrophin##S38776|DMD|1756|dystrophin##NM_004011|DMD|1756|dystrophin##NM_004012|DMD|1756|dystrophin##NM_004010|DMD|1756|dystrophin##S81419|DMD|1756|dystrophin##NM_004009|DMD|1756|dystrophin##S64152|DMD|1756|dystrophin##S60972|DMD|1756|dystrophin##X14298|DMD|1756|dystrophin##AK309142|DMD|1756|dystrophin##M18533|DMD|1756|dystrophin##BC010932|DMD|1756|dystrophin##NM_004006|DMD|1756|dystrophin	0.0	
chr3	53955451	53955571	reg1018055.p1	8.418	+	TSC_hg19_v1_chr3_-_53925897 AF537132 AK289594 BC013162 AK123406 AF085359 AF161415 NM_021237	-29582	-	TSC_hg19_v1_chr3_-_53916202 NM_022899	-39298	-	TSC_hg19_v1_chr3_-_53916180 AK022996	-39375	-	BC137502 BC137505 TSC_hg19_v1_chr3_+_54156614	201088	+	TSC_hg19_v1_chr3_+_54156691 AF516696 NM_018398	201180	+	BC074741 AF225421 NM_020678	1006505	-	AF537132|SELK|58515|selenoprotein K##AK289594|SELK|58515|selenoprotein K##BC013162|SELK|58515|selenoprotein K##AK123406|SELK|58515|selenoprotein K##AF085359|SELK|58515|selenoprotein K##AF161415|SELK|58515|selenoprotein K##NM_021237|SELK|58515|selenoprotein K##NM_022899|ACTR8|93973|ARP8 actin-related protein 8 homolog (yeast)##AK022996|ACTR8|93973|ARP8 actin-related protein 8 homolog (yeast)##BC137502|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137505|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##AF516696|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##NM_018398|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1	0.839538	CTCF.p2:6:0.840
chr5	171710512	171710628	reg1015478.p2	8.418	+	NM_001171183	-89395	+	TSC_hg19_v1_chr5_-_171615363 NM_005990	-95198	-	TSC_hg19_v1_chr5_-_171615241 BC070077 AK313350	-95297	-	BC019910 TSC_hg19_v1_chr5_-_171710765 AK313274	134	-	NM_152277 TSC_hg19_v1_chr5_-_171710808	245	-	AB430862 DQ109556 BC038561 TSC_hg19_v1_chr5_-_171881387	170801	-	NM_001171183|EFCAB9|285588|EF-hand calcium binding domain 9##NM_005990|STK10|6793|serine/threonine kinase 10##BC070077|STK10|6793|serine/threonine kinase 10##AK313350|STK10|6793|serine/threonine kinase 10##BC019910|UBTD2|92181|ubiquitin domain containing 2##AK313274|UBTD2|92181|ubiquitin domain containing 2##NM_152277|UBTD2|92181|ubiquitin domain containing 2##AB430862|SH3PXD2B|285590|SH3 and PX domains 2B##DQ109556|SH3PXD2B|285590|SH3 and PX domains 2B##BC038561|SH3PXD2B|285590|SH3 and PX domains 2B	0.706438	CTCF.p2:16:0.706
chr10	120219230	120219360	reg1015571.p1	8.417	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	-117471	-	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	-412865	+	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	-413251	-	AK313269 AK290461 NM_004248	135863	-	CU691560 TSC_hg19_v1_chr10_-_120514298	294992	-	TSC_hg19_v1_chr10_-_120514483 AJ544771 AK097728	295216	-	AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A##BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AK313269|PRLHR|2834|prolactin releasing hormone receptor##AK290461|PRLHR|2834|prolactin releasing hormone receptor##NM_004248|PRLHR|2834|prolactin releasing hormone receptor##AJ544771|C10orf46|143384|chromosome 10 open reading frame 46##AK097728|C10orf46|143384|chromosome 10 open reading frame 46	0.998148	CTCF.p2:3:0.998
chr18	57126741	57126851	reg1017693.p1	8.417	+	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	-100310	-	EU831768 EU831846 AY286502 BC065562 BX640655 AB593158 BX648518 BC106887 BC106888 AK123184 NM_181654	-141010	-	BC051901 AF115392 NM_013435 AB593018	-186142	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	237795	-	NM_133459 TSC_hg19_v1_chr18_-_57364656	237854	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	440433	+	DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1##EU831768|CPLX4|339302|complexin 4##EU831846|CPLX4|339302|complexin 4##AY286502|CPLX4|339302|complexin 4##BC065562|CPLX4|339302|complexin 4##BX640655|CPLX4|339302|complexin 4##AB593158|CPLX4|339302|complexin 4##BX648518|CPLX4|339302|complexin 4##BC106887|CPLX4|339302|complexin 4##BC106888|CPLX4|339302|complexin 4##AK123184|CPLX4|339302|complexin 4##NM_181654|CPLX4|339302|complexin 4##BC051901|RAX|30062|retina and anterior neural fold homeobox##AF115392|RAX|30062|retina and anterior neural fold homeobox##NM_013435|RAX|30062|retina and anterior neural fold homeobox##AB593018|RAX|30062|retina and anterior neural fold homeobox##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1	0.32453	CTCF.p2:-7:0.325
chr1	90418903	90418990	reg1014053.p2	8.417	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-131382	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-131488	+	TSC_hg19_v1_chr1_+_90286603 AK092238 AX747423	-132347	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	41770	+	BC126439 BC126441 AY338397 NM_020063	763839	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	1068092	-	BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##AK092238|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644	0.025915	
chr8	1644047	1644187	reg1016633.p1	8.417	+	AF119818 AF119817 NM_004745	-194568	+	AK290264 TSC_hg19_v1_chr8_-_681225 BC046243 NM_207332	-962886	-	TSC_hg19_v1_chr8_-_681204 AK297476	-962906	-	NM_018941 TSC_hg19_v1_chr8_+_1711937 AK312486 AF123757 AF123758 AF123759 AF123760 AF123761	67793	+	TSC_hg19_v1_chr8_+_1712012 BC007725	67919	+	TSC_hg19_v1_chr8_+_1772112 AB002292 NM_014629 BC112926 CR749570	128022	+	AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##AK290264|ERICH1|157697|glutamate-rich 1##BC046243|ERICH1|157697|glutamate-rich 1##NM_207332|ERICH1|157697|glutamate-rich 1##AK297476|ERICH1|157697|glutamate-rich 1##NM_018941|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AK312486|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123757|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123758|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123759|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123760|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123761|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##BC007725|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AB002292|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##NM_014629|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##BC112926|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##CR749570|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10	0.400719	CTCF.p2:14:0.401
chr10	120966330	120966435	reg1016201.p2	8.415	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-28035	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-28079	-	CU687762 AY269785 TSC_hg19_v1_chr10_-_120925213 AK095295 BC063562 BC050475 NM_213649	-41195	-	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	879	+	NM_002925	329662	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	335808	-	BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##AY269785|SFXN4|119559|sideroflexin 4##AK095295|SFXN4|119559|sideroflexin 4##BC063562|SFXN4|119559|sideroflexin 4##BC050475|SFXN4|119559|sideroflexin 4##NM_213649|SFXN4|119559|sideroflexin 4##BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10	0.878774	CTCF.p2:8:0.879
chr10	78307257	78307393	reg1018484.p1	8.415	+	AF267860 NM_032024	-764807	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1145760	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1145844	-	AF118141 TSC_hg19_v1_chr10_-_79397246	1089900	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	1090011	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	1090081	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.999695	CTCF.p2:-9:1.000
chr5	28576267	28576391	reg1018914.p1	8.415	+	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	-1103926	+	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	-1537658	-	NM_006727	-3931245	-	NM_004932 TSC_hg19_v1_chr5_+_31193792 AK291290	2617467	+	TSC_hg19_v1_chr5_+_31193875 BC000019 AK024238	2617548	+	TSC_hg19_v1_chr5_-_31532201 AK308093 AF189011 BC054003 BX647724 NM_001100412 NM_013235	2955893	-	BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK308093|DROSHA|29102|drosha, ribonuclease type III##AF189011|DROSHA|29102|drosha, ribonuclease type III##BC054003|DROSHA|29102|drosha, ribonuclease type III##BX647724|DROSHA|29102|drosha, ribonuclease type III##NM_001100412|DROSHA|29102|drosha, ribonuclease type III##NM_013235|DROSHA|29102|drosha, ribonuclease type III	0.09213	
chr6	135827552	135827674	reg1014065.p1	8.415	+	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	-8649	+	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	-8728	-	AY133243 TSC_hg19_v1_chr6_-_135818858 DQ090887	-8788	-	AK290582 AB038040 NM_018945 TSC_hg19_v1_chr6_+_136172838 AJ251860 BC070267	345238	+	TSC_hg19_v1_chr6_-_136571414 AK292303 BC063688 AK125758 NM_001099286 NM_138419	743816	-	BC078160 BC063846 TSC_hg19_v1_chr6_-_136610926 BX649160 BC016682	783297	-	BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##AY133243|AHI1|54806|Abelson helper integration site 1##DQ090887|AHI1|54806|Abelson helper integration site 1##AK290582|PDE7B|27115|phosphodiesterase 7B##AB038040|PDE7B|27115|phosphodiesterase 7B##NM_018945|PDE7B|27115|phosphodiesterase 7B##AJ251860|PDE7B|27115|phosphodiesterase 7B##BC070267|PDE7B|27115|phosphodiesterase 7B##AK292303|FAM54A|113115|family with sequence similarity 54, member A##BC063688|FAM54A|113115|family with sequence similarity 54, member A##AK125758|FAM54A|113115|family with sequence similarity 54, member A##NM_001099286|FAM54A|113115|family with sequence similarity 54, member A##NM_138419|FAM54A|113115|family with sequence similarity 54, member A##BC078160|BCLAF1|9774|BCL2-associated transcription factor 1##BC063846|BCLAF1|9774|BCL2-associated transcription factor 1##BX649160|BCLAF1|9774|BCL2-associated transcription factor 1##BC016682|BCLAF1|9774|BCL2-associated transcription factor 1	0.959473	CTCF.p2:-23:0.959
chr19	50175710	50175829	reg1015568.p2	8.414	+	AB590882 TSC_hg19_v1_chr19_+_50169270 BC007724	-6582	+	TSC_hg19_v1_chr19_-_50169088 BC000660 AK314421 BC009395 AK057577 AK292027 NM_001197122 NM_001197123 NM_001197124 NM_001197125 NM_001197126 NM_001197127 NM_001197128 NM_001571	-6690	-	TSC_hg19_v1_chr19_-_50168868 Z56281 HM357932 HM357933 HM357934 HM357935 HM357936 HM357937	-6856	-	AK304660 NM_001207042 NM_001536 NM_198318 TSC_hg19_v1_chr19_+_50180491	4680	+	AK295973 TSC_hg19_v1_chr19_+_50180493 AB590883 BC019268 AY775289 D66904 Y10805 Y10806 Y10807 BC109282 BC109283	4752	+	BC032764 NM_001101340	16161	+	BC007724|BCL2L12|83596|BCL2-like 12 (proline rich)##BC000660|IRF3|3661|interferon regulatory factor 3##AK314421|IRF3|3661|interferon regulatory factor 3##BC009395|IRF3|3661|interferon regulatory factor 3##AK057577|IRF3|3661|interferon regulatory factor 3##AK292027|IRF3|3661|interferon regulatory factor 3##NM_001197122|IRF3|3661|interferon regulatory factor 3##NM_001197123|IRF3|3661|interferon regulatory factor 3##NM_001197124|IRF3|3661|interferon regulatory factor 3##NM_001197125|IRF3|3661|interferon regulatory factor 3##NM_001197126|IRF3|3661|interferon regulatory factor 3##NM_001197127|IRF3|3661|interferon regulatory factor 3##NM_001197128|IRF3|3661|interferon regulatory factor 3##NM_001571|IRF3|3661|interferon regulatory factor 3##Z56281|IRF3|3661|interferon regulatory factor 3##HM357932|IRF3|3661|interferon regulatory factor 3##HM357933|IRF3|3661|interferon regulatory factor 3##HM357934|IRF3|3661|interferon regulatory factor 3##HM357935|IRF3|3661|interferon regulatory factor 3##HM357936|IRF3|3661|interferon regulatory factor 3##HM357937|IRF3|3661|interferon regulatory factor 3##AK304660|PRMT1|3276|protein arginine methyltransferase 1##NM_001207042|PRMT1|3276|protein arginine methyltransferase 1##NM_001536|PRMT1|3276|protein arginine methyltransferase 1##NM_198318|PRMT1|3276|protein arginine methyltransferase 1##AK295973|PRMT1|3276|protein arginine methyltransferase 1##BC019268|PRMT1|3276|protein arginine methyltransferase 1##AY775289|PRMT1|3276|protein arginine methyltransferase 1##D66904|PRMT1|3276|protein arginine methyltransferase 1##Y10805|PRMT1|3276|protein arginine methyltransferase 1##Y10806|PRMT1|3276|protein arginine methyltransferase 1##Y10807|PRMT1|3276|protein arginine methyltransferase 1##BC109282|PRMT1|3276|protein arginine methyltransferase 1##BC109283|PRMT1|3276|protein arginine methyltransferase 1##BC032764|C19orf76|199800|chromosome 19 open reading frame 76##NM_001101340|C19orf76|199800|chromosome 19 open reading frame 76	0.994345	CTCF.p2:0:0.994
chr8	55545505	55545611	reg1015922.p1	8.414	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	-16906	+	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	-175042	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-497747	+	BC106028 AY534241 NM_052898	469456	+	AF286340 NM_024831	1140187	+	AK308247 AK056932 NM_152417 BC020835 BC071636	1140339	-	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##AF286340|TGS1|96764|trimethylguanosine synthase 1##NM_024831|TGS1|96764|trimethylguanosine synthase 1##AK308247|TMEM68|137695|transmembrane protein 68##AK056932|TMEM68|137695|transmembrane protein 68##NM_152417|TMEM68|137695|transmembrane protein 68##BC020835|TMEM68|137695|transmembrane protein 68##BC071636|TMEM68|137695|transmembrane protein 68	0.994438	CTCF.p2:0:0.994
chr13	47030247	47030370	reg1015968.p1	8.413	+	AK125950 TSC_hg19_v1_chr13_-_47012386	-17948	-	NM_025113	-68674	-	TSC_hg19_v1_chr13_-_46961379 AK025215 AK293034	-68924	-	NM_001164211 NM_001164213 NM_015116 TSC_hg19_v1_chr13_+_47127304 AY050631 AY050632 AK309937	96994	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	97015	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	97112	+	AK125950|KIAA0226L|80183|KIAA0226-like##NM_025113|KIAA0226L|80183|KIAA0226-like##AK025215|KIAA0226L|80183|KIAA0226-like##AK293034|KIAA0226L|80183|KIAA0226-like##NM_001164211|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##NM_001164213|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##NM_015116|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AY050631|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AY050632|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK309937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1	0.925991	CTCF.p2:5:0.926
chr5	77268643	77268769	reg1017803.p1	8.413	+	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	-196574	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	-334192	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	-334277	-	BC113045 CU691576 DQ894915 EU176289 TSC_hg19_v1_chr5_-_77590458 AK225908 U91931	321719	-	TSC_hg19_v1_chr5_-_77590488 AY623424 AK303300	321771	-	TSC_hg19_v1_chr5_-_77590495 U81504	321786	-	BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##EU446696|OTP|23440|orthopedia homeobox##DQ894915|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##EU176289|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK225908|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U91931|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AY623424|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK303300|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U81504|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit	0.029405	
chrX	129162316	129162404	reg1014615.p1	8.413	+	NM_021946 TSC_hg19_v1_chrX_+_129139243 AK074089	-23154	+	TSC_hg19_v1_chrX_+_129040144 NM_001166221 NM_006649 AK291918 AK298578 BC009649 BC001149 AK304563 BC014987 AF039694 AB590128 CU679427 DQ892549 DQ895760	-122229	+	TSC_hg19_v1_chrX_-_128977856 AL161962 AK096967 AF151847 AY358558 BC006200 BC012826 BC003128 AK001112 AY952881 NM_016032	-184532	-	TSC_hg19_v1_chrX_-_129244438 U32645	82084	-	TSC_hg19_v1_chrX_-_129244474 NM_001421	82118	-	BC017194 AK314972 NM_001127197 TSC_hg19_v1_chrX_-_129244713	82327	-	NM_021946|BCORL1|63035|BCL6 corepressor-like 1##AK074089|BCORL1|63035|BCL6 corepressor-like 1##NM_001166221|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_006649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK291918|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK298578|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC009649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC001149|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK304563|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC014987|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ892549|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ895760|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9##U32645|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001421|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##BC017194|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##AK314972|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001127197|ELF4|2000|E74-like factor 4 (ets domain transcription factor)	0.999461	CTCF.p2:3:0.999
chrX	65250879	65251018	reg1018770.p1	8.413	+	TSC_hg19_v1_chrX_+_65235302 DQ680071 DQ680072	-15657	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	-363300	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	-363401	+	DQ891770 DQ894953 BC010525 AJ132502 AK293215 AK298389 AK075153 AK297050 AK301417 AK075171 NM_001100431 NM_001184830 NM_001184831 NM_007268	8954	-	NM_138737 TSC_hg19_v1_chrX_+_65382512	131527	+	TSC_hg19_v1_chrX_+_65382627 BC011561	131696	+	AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##DQ891770|VSIG4|11326|V-set and immunoglobulin domain containing 4##DQ894953|VSIG4|11326|V-set and immunoglobulin domain containing 4##BC010525|VSIG4|11326|V-set and immunoglobulin domain containing 4##AJ132502|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK293215|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK298389|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075153|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK297050|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK301417|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075171|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001100431|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184830|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184831|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_007268|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_138737|HEPH|9843|hephaestin##BC011561|HEPH|9843|hephaestin	0.923684	CTCF.p2:8:0.924
chr1	237970189	237970338	reg1018137.p1	8.412	+	NM_001035 X98330 Y08218	-764490	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-1011428	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	-1011686	+	AK314151 NM_021186	83958	-	TSC_hg19_v1_chr1_+_239550016 AK056349	1579679	+	AF279779 NM_000740	1822109	+	NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3	0.90004	CTCF.p2:-4:0.900
chr17	27451213	27451320	reg1016177.p1	8.411	+	AK054958 NM_004740	-48640	-	TSC_hg19_v1_chr17_-_27401793 BC131561 BC047669	-49408	-	BC058075 TSC_hg19_v1_chr17_-_27401707	-49617	-	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	16145	-	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	56084	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	122611	+	AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC131561|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC047669|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC058075|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1	0.836056	CTCF.p2:-5:0.836
chr1	25475294	25475434	reg1019501.p1	8.410	+	BC013362 AK310945 NM_001031680 AF022726	-183822	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-218578	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-218625	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	83623	-	BC065040 TSC_hg19_v1_chr1_-_25573922	98559	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	98609	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.573269	CTCF.p2:0:0.573
chr16	23568749	23568880	reg1015581.p2	8.410	+	TSC_hg19_v1_chr16_-_23568680 AB075850 EU832445 EU832528 BC040013 CU691806 AL832489 AK095998 NM_001083614	-138	-	TSC_hg19_v1_chr16_-_23521816 AK024619 NM_015044	-47004	-	TSC_hg19_v1_chr16_-_23521794 BC000284 AK308425	-47017	-	TSC_hg19_v1_chr16_+_23568953 NM_019116	101	+	TSC_hg19_v1_chr16_+_23569043 AK124139	221	+	TSC_hg19_v1_chr16_+_23569047 AK092696	234	+	AB075850|EARS2|124454|glutamyl-tRNA synthetase 2, mitochondrial (putative)##EU832445|EARS2|124454|glutamyl-tRNA synthetase 2, mitochondrial (putative)##EU832528|EARS2|124454|glutamyl-tRNA synthetase 2, mitochondrial (putative)##BC040013|EARS2|124454|glutamyl-tRNA synthetase 2, mitochondrial (putative)##AL832489|EARS2|124454|glutamyl-tRNA synthetase 2, mitochondrial (putative)##AK095998|EARS2|124454|glutamyl-tRNA synthetase 2, mitochondrial (putative)##NM_001083614|EARS2|124454|glutamyl-tRNA synthetase 2, mitochondrial (putative)##AK024619|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##NM_015044|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##BC000284|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AK308425|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##NM_019116|UBFD1|56061|ubiquitin family domain containing 1##AK124139|UBFD1|56061|ubiquitin family domain containing 1##AK092696|UBFD1|56061|ubiquitin family domain containing 1	0.999353	CTCF.p2:16:0.999
chr18	61685223	61685365	reg1016411.p1	8.410	+	NM_001031848 NM_002640 NM_198833 AK300391 L40377 TSC_hg19_v1_chr18_+_61637345 BC034528 U92984 BX571754 AK313782	-47981	+	NM_001123366	-68707	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	-102550	+	AJ007611 NM_033646	1732193	+	TSC_hg19_v1_chr18_+_63417845 BC036786	1732572	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	1732908	+	NM_001031848|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_002640|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_198833|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK300391|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##L40377|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BC034528|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##U92984|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BX571754|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK313782|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2	0.161515	
chr20	23649129	23649290	reg1016067.p1	8.410	+	BX647523 BT006839 CR541988 CR542018 AB590227 DQ891439 EU176584 AB587083 TSC_hg19_v1_chr20_-_23618593 BC013083 NM_000099 X05607 BC110305 AK312213	-30710	-	AF494536 BC137302 BC137303 NM_001008693	-62649	-	AY358615 AK312112 BC029656 NM_080610	-99853	-	CU688086 BC074952 BC074953 NM_001899 X54667 BC065714	20432	-	J03870 BC021225 NM_001898	82356	-	CU687582 NM_001322 BC062679	158123	-	BX647523|CST3|1471|cystatin C##BT006839|CST3|1471|cystatin C##CR541988|CST3|1471|cystatin C##CR542018|CST3|1471|cystatin C##DQ891439|CST3|1471|cystatin C##EU176584|CST3|1471|cystatin C##AB587083|CST3|1471|cystatin C##BC013083|CST3|1471|cystatin C##NM_000099|CST3|1471|cystatin C##X05607|CST3|1471|cystatin C##BC110305|CST3|1471|cystatin C##AK312213|CST3|1471|cystatin C##AF494536|CST9|128822|cystatin 9 (testatin)##BC137302|CST9|128822|cystatin 9 (testatin)##BC137303|CST9|128822|cystatin 9 (testatin)##NM_001008693|CST9|128822|cystatin 9 (testatin)##AY358615|CST9L|128821|cystatin 9-like##AK312112|CST9L|128821|cystatin 9-like##BC029656|CST9L|128821|cystatin 9-like##NM_080610|CST9L|128821|cystatin 9-like##BC074952|CST4|1472|cystatin S##BC074953|CST4|1472|cystatin S##NM_001899|CST4|1472|cystatin S##X54667|CST4|1472|cystatin S##BC065714|CST4|1472|cystatin S##J03870|CST1|1469|cystatin SN##BC021225|CST1|1469|cystatin SN##NM_001898|CST1|1469|cystatin SN##NM_001322|CST2|1470|cystatin SA##BC062679|CST2|1470|cystatin SA	0.990634	CTCF.p2:-1:0.991
chr7	100933801	100933929	reg1015800.p1	8.410	+	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-38299	-	TSC_hg19_v1_chr7_-_100888367 NM_016068	-45495	-	CU678480 BC003540 BC009428 TSC_hg19_v1_chr7_-_100888363 AF151893	-45540	-	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	31173	-	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	72352	+	BC002778 NM_138403	338710	-	AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##NM_016068|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC003540|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC009428|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AF151893|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory	0.999863	CTCF.p2:12:1.000
chr16	20613748	20613845	reg1015111.p1	8.409	+	AB073604 AK129944 AK289416 AK309601 NM_001105069 NM_182617	-26137	-	NM_001010845 AK298359 AK055867 AK303774 AK096039 AK298434 BC125175 BC125176	-150895	+	TSC_hg19_v1_chr16_+_20420855 BC016703 BC068516 NM_017888 AK000588 BC013753	-192936	+	AB059429 BC125177 BC125178 NM_052956	88781	-	BC000448 TSC_hg19_v1_chr16_-_20753141 AK000281 NM_017736	139361	-	NM_005622 NM_202000 TSC_hg19_v1_chr16_+_20775331 AK223139 AK290322 X80062	161548	+	AB073604|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##AK129944|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##AK289416|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##AK309601|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##NM_001105069|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##NM_182617|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##NM_001010845|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK298359|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK055867|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK303774|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK096039|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK298434|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC125175|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC125176|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC016703|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##BC068516|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##NM_017888|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##AK000588|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##BC013753|ACSM5|54988|acyl-CoA synthetase medium-chain family member 5##AB059429|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##BC125177|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##BC125178|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##NM_052956|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##BC000448|THUMPD1|55623|THUMP domain containing 1##AK000281|THUMPD1|55623|THUMP domain containing 1##NM_017736|THUMPD1|55623|THUMP domain containing 1##NM_005622|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##NM_202000|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##AK223139|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##AK290322|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##X80062|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3	0.963597	CTCF.p2:-11:0.964
chr6	41754258	41754405	reg1016241.p1	8.408	+	AL137721 NM_013397 TSC_hg19_v1_chr6_+_41748522 BC027896 AK057184	-5746	+	TSC_hg19_v1_chr6_-_41747644 NM_006653	-6642	-	J04443 BC042578 BC073740 U75272 TSC_hg19_v1_chr6_-_41715136 AK223274 AK301298 AK301325 NM_001166424 NM_002630	-39214	-	TSC_hg19_v1_chr6_+_41754422 AJ420506	118	+	NM_001134493	849	+	TSC_hg19_v1_chr6_+_41755397 BC015975	1058	+	NM_013397|PRICKLE4|29964|prickle homolog 4 (Drosophila)##NM_006653|FRS3|10817|fibroblast growth factor receptor substrate 3##J04443|PGC|5225|progastricsin (pepsinogen C)##BC042578|PGC|5225|progastricsin (pepsinogen C)##BC073740|PGC|5225|progastricsin (pepsinogen C)##U75272|PGC|5225|progastricsin (pepsinogen C)##AK223274|PGC|5225|progastricsin (pepsinogen C)##AK301298|PGC|5225|progastricsin (pepsinogen C)##AK301325|PGC|5225|progastricsin (pepsinogen C)##NM_001166424|PGC|5225|progastricsin (pepsinogen C)##NM_002630|PGC|5225|progastricsin (pepsinogen C)##AJ420506|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##NM_001134493|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC015975|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)	0.976351	CTCF.p2:6:0.976
chr2	202660744	202660863	reg1016630.p1	8.407	+	NM_001135745 NM_020919	-14909	-	TSC_hg19_v1_chr2_-_202645657 BC071576 AB053305 AB053306 AF391100 AK023024 BC029174 AK291029	-15138	-	AK090992 TSC_hg19_v1_chr2_-_202645631	-15191	-	AB053308 AX772791 NM_139158 AK131512 BX647394 BC038807 EU831752 EU831828	10489	+	AB017365 NM_003507 AB010881 BC015915 CU677505	238536	+	X99586 TSC_hg19_v1_chr2_-_203103288 U38784 U67122 BC053528 AK311840 BC005899 AB062294 BC066306 BC006462 U83117 U61397 NM_001005781 NM_001005782 NM_003352	442465	-	NM_001135745|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##NM_020919|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##BC071576|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053305|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053306|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AF391100|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AK023024|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##BC029174|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AK291029|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053308|CDK15|65061|cyclin-dependent kinase 15##AX772791|CDK15|65061|cyclin-dependent kinase 15##NM_139158|CDK15|65061|cyclin-dependent kinase 15##AK131512|CDK15|65061|cyclin-dependent kinase 15##BX647394|CDK15|65061|cyclin-dependent kinase 15##BC038807|CDK15|65061|cyclin-dependent kinase 15##EU831752|CDK15|65061|cyclin-dependent kinase 15##EU831828|CDK15|65061|cyclin-dependent kinase 15##AB017365|FZD7|8324|frizzled family receptor 7##NM_003507|FZD7|8324|frizzled family receptor 7##AB010881|FZD7|8324|frizzled family receptor 7##BC015915|FZD7|8324|frizzled family receptor 7##X99586|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U38784|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U67122|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC053528|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK311840|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC005899|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AB062294|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC066306|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC006462|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U83117|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U61397|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005781|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005782|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_003352|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)	0.0	
chr22	23718615	23718732	reg1015723.p2	8.407	+	TSC_hg19_v1_chr22_+_23540316 X14677 X14675	-178268	+	TSC_hg19_v1_chr22_+_23523013 X06418 EU216058 EU216059 EU216061 EU216062 EU216063 EU216064 EU216065 EU216067 EU216068 EU216069 EU216070 EU216072	-195624	+	TSC_hg19_v1_chr22_+_23522745 AB209991	-195873	+	TSC_hg19_v1_chr22_-_23744738 AK056130 AK092581 AX747609 AK092530 AX747585	26070	-	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	203762	-	BC056888 AL080197 BC063390 AK310349 NM_016449	255823	-	X06418|BCR|613|breakpoint cluster region##EU216058|BCR|613|breakpoint cluster region##EU216059|BCR|613|breakpoint cluster region##EU216061|BCR|613|breakpoint cluster region##EU216062|BCR|613|breakpoint cluster region##EU216063|BCR|613|breakpoint cluster region##EU216064|BCR|613|breakpoint cluster region##EU216067|BCR|613|breakpoint cluster region##EU216069|BCR|613|breakpoint cluster region##EU216070|BCR|613|breakpoint cluster region##AB209991|BCR|613|breakpoint cluster region##AK056130|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092581|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092530|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43	0.992582	CTCF.p2:3:0.993
chr4	2980262	2980384	reg1018116.p1	8.407	+	TSC_hg19_v1_chr4_+_2965297 AK292390 AK223581 NM_001004056 NM_001004057 NM_182982 BC110825 BC027597 BC039732 BC117320 U33054 U33055 U33056 AK293569 X97879 X97880 X97881 X98118 HQ258463 X75897	-14788	+	TSC_hg19_v1_chr4_-_2965155 AK292939	-15129	-	BC053635 TSC_hg19_v1_chr4_-_2965134 BC017358 NM_003703	-15200	-	L12392 TSC_hg19_v1_chr4_+_3076416 AB016794 NM_002111	96004	+	AK126094 NM_001042690	270443	+	TSC_hg19_v1_chr4_+_3294763 AK310999 BC028154	314437	+	AK292390|GRK4|2868|G protein-coupled receptor kinase 4##AK223581|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004056|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004057|GRK4|2868|G protein-coupled receptor kinase 4##NM_182982|GRK4|2868|G protein-coupled receptor kinase 4##BC027597|GRK4|2868|G protein-coupled receptor kinase 4##BC117320|GRK4|2868|G protein-coupled receptor kinase 4##U33054|GRK4|2868|G protein-coupled receptor kinase 4##U33055|GRK4|2868|G protein-coupled receptor kinase 4##U33056|GRK4|2868|G protein-coupled receptor kinase 4##X97879|GRK4|2868|G protein-coupled receptor kinase 4##X97880|GRK4|2868|G protein-coupled receptor kinase 4##X97881|GRK4|2868|G protein-coupled receptor kinase 4##X98118|GRK4|2868|G protein-coupled receptor kinase 4##HQ258463|GRK4|2868|G protein-coupled receptor kinase 4##X75897|GRK4|2868|G protein-coupled receptor kinase 4##AK292939|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC053635|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC017358|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##NM_003703|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##L12392|HTT|3064|huntingtin##AB016794|HTT|3064|huntingtin##NM_002111|HTT|3064|huntingtin##AK126094|C4orf44|345222|chromosome 4 open reading frame 44##NM_001042690|C4orf44|345222|chromosome 4 open reading frame 44##AK310999|RGS12|6002|regulator of G-protein signaling 12##BC028154|RGS12|6002|regulator of G-protein signaling 12	0.924701	CTCF.p2:6:0.925
chr1	152161143	152161300	reg1015783.p1	8.406	+	AY396742 NM_001122965	-29518	-	NM_007113	-74666	-	BC137493 AY456639 NM_001008536	-99687	-	CR933683 TSC_hg19_v1_chr1_+_152161805	574	+	AB180729 NM_001009931 AY396741	35448	-	L01090 NM_002016	136457	-	AY396742|RPTN|126638|repetin##NM_001122965|RPTN|126638|repetin##NM_007113|TCHH|7062|trichohyalin##BC137493|TCHHL1|126637|trichohyalin-like 1##AY456639|TCHHL1|126637|trichohyalin-like 1##NM_001008536|TCHHL1|126637|trichohyalin-like 1##AB180729|HRNR|388697|hornerin##NM_001009931|HRNR|388697|hornerin##AY396741|HRNR|388697|hornerin##L01090|FLG|2312|filaggrin##NM_002016|FLG|2312|filaggrin	0.997072	CTCF.p2:25:0.997
chr1	3531845	3531949	reg1015150.p1	8.406	+	AB231860 NM_001409	-3839	-	TSC_hg19_v1_chr1_-_3447976 AB011539	-83905	-	AK310408 TSC_hg19_v1_chr1_+_3388187 AK296150	-143713	+	TSC_hg19_v1_chr1_+_3541565 NM_182752 AK096427	9667	+	AK298343 TSC_hg19_v1_chr1_+_3541608 AK289919 BC019034	9712	+	CU678066 AB034912 AK000437 AK225525 BC002611 BC086311 TSC_hg19_v1_chr1_-_3566668 AK302397 NM_017818	34719	-	AB231860|MEGF6|1953|multiple EGF-like-domains 6##NM_001409|MEGF6|1953|multiple EGF-like-domains 6##AB011539|MEGF6|1953|multiple EGF-like-domains 6##AK310408|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK296150|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##NM_182752|TPRG1L|127262|tumor protein p63 regulated 1-like##AK096427|TPRG1L|127262|tumor protein p63 regulated 1-like##AK298343|TPRG1L|127262|tumor protein p63 regulated 1-like##AK289919|TPRG1L|127262|tumor protein p63 regulated 1-like##BC019034|TPRG1L|127262|tumor protein p63 regulated 1-like##AB034912|WRAP73|49856|WD repeat containing, antisense to TP73##AK000437|WRAP73|49856|WD repeat containing, antisense to TP73##AK225525|WRAP73|49856|WD repeat containing, antisense to TP73##BC002611|WRAP73|49856|WD repeat containing, antisense to TP73##BC086311|WRAP73|49856|WD repeat containing, antisense to TP73##AK302397|WRAP73|49856|WD repeat containing, antisense to TP73##NM_017818|WRAP73|49856|WD repeat containing, antisense to TP73	0.881959	CTCF.p2:-3:0.882
chr1	7812983	7813113	reg1015895.p1	8.406	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-967557	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-1051117	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-1051166	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	18328	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	31361	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	31777	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.999917	CTCF.p2:16:1.000
chr18	33597745	33597891	reg1018149.p1	8.406	+	NM_001201474 NM_001201475 NM_001201476 NM_031446 BC108730 TSC_hg19_v1_chr18_+_33552656 BC119765 BC119766 AK311536 AF277182 AF277189 BC025950	-45151	+	NM_020474 BC047746 U41514 AB529022 X85018	-363239	+	AK095502 AK300660 BC039404 NM_001098817 NM_194281	-519893	-	TSC_hg19_v1_chr18_-_33647515 DQ892910 EU176720 AF419845 NM_018170 BC000225 AK314569	49609	-	BC010136 TSC_hg19_v1_chr18_-_33647520	49701	-	AK001518 AK292907 TSC_hg19_v1_chr18_-_33647523	49734	-	NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21##NM_031446|C18orf21|83608|chromosome 18 open reading frame 21##BC108730|C18orf21|83608|chromosome 18 open reading frame 21##BC119765|C18orf21|83608|chromosome 18 open reading frame 21##BC119766|C18orf21|83608|chromosome 18 open reading frame 21##AF277182|C18orf21|83608|chromosome 18 open reading frame 21##AF277189|C18orf21|83608|chromosome 18 open reading frame 21##BC025950|C18orf21|83608|chromosome 18 open reading frame 21##NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##AK095502|INO80C|125476|INO80 complex subunit C##AK300660|INO80C|125476|INO80 complex subunit C##BC039404|INO80C|125476|INO80 complex subunit C##NM_001098817|INO80C|125476|INO80 complex subunit C##NM_194281|INO80C|125476|INO80 complex subunit C##DQ892910|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##EU176720|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AF419845|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##NM_018170|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC000225|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK314569|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC010136|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK001518|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK292907|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A	0.999351	CTCF.p2:11:0.999
chr19	42937935	42938045	reg1014868.p1	8.406	+	AK309893 AK292482 BC029961 BC070041 NM_005357 U40002	-6452	-	TSC_hg19_v1_chr19_-_42928157 BC029301	-9777	-	TSC_hg19_v1_chr19_+_42901325 AK311181	-36678	+	BC093946 BC112095 AK292985 AY358433 NM_198477 AY598464	9134	-	X16356 TSC_hg19_v1_chr19_-_43031473	93419	-	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	94602	-	AK292482|LIPE|3991|lipase, hormone-sensitive##BC029961|LIPE|3991|lipase, hormone-sensitive##BC070041|LIPE|3991|lipase, hormone-sensitive##NM_005357|LIPE|3991|lipase, hormone-sensitive##U40002|LIPE|3991|lipase, hormone-sensitive##BC029301|LIPE|3991|lipase, hormone-sensitive##BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17##BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17##NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)	0.053751	
chr5	151940224	151940345	reg1015932.p1	8.405	+	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	-155533	-	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	-635922	-	TSC_hg19_v1_chr5_+_151151662 X78262	-788620	+	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	929981	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	1478173	-	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	1478240	+	AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##X78262|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3	0.997509	CTCF.p2:-7:0.998
chr9	131464697	131464877	reg1015710.p1	8.405	+	AK300609 NM_001248001	-12534	+	TSC_hg19_v1_chr9_+_131451848 AM392720 AM392742 AM393175 AM393446 DQ894408 EU176263 CU689520 M93651 AY349172 CR536543 CR542050 U51924	-12925	+	TSC_hg19_v1_chr9_+_131451830 BC032749 X75091 EF534308	-12953	+	TSC_hg19_v1_chr9_+_131464821 BC023327 NM_013355	56	+	TSC_hg19_v1_chr9_+_131465139 BC032794 BC041581 BC062558 EU831416 EU831509	313	+	CU690564 BC009280 BC048251 TSC_hg19_v1_chr9_-_131486407 AK027430 AK075332 AK315746 AK092843 AX747760 NM_032799	21602	-	AK300609|SET|6418|SET nuclear oncogene##NM_001248001|SET|6418|SET nuclear oncogene##AM392720|SET|6418|SET nuclear oncogene##AM392742|SET|6418|SET nuclear oncogene##AM393175|SET|6418|SET nuclear oncogene##AM393446|SET|6418|SET nuclear oncogene##DQ894408|SET|6418|SET nuclear oncogene##EU176263|SET|6418|SET nuclear oncogene##M93651|SET|6418|SET nuclear oncogene##AY349172|SET|6418|SET nuclear oncogene##CR536543|SET|6418|SET nuclear oncogene##CR542050|SET|6418|SET nuclear oncogene##U51924|SET|6418|SET nuclear oncogene##BC032749|SET|6418|SET nuclear oncogene##X75091|SET|6418|SET nuclear oncogene##EF534308|SET|6418|SET nuclear oncogene##BC023327|PKN3|29941|protein kinase N3##NM_013355|PKN3|29941|protein kinase N3##BC032794|PKN3|29941|protein kinase N3##BC041581|PKN3|29941|protein kinase N3##BC062558|PKN3|29941|protein kinase N3##EU831416|PKN3|29941|protein kinase N3##EU831509|PKN3|29941|protein kinase N3##BC009280|ZDHHC12|84885|zinc finger, DHHC-type containing 12##BC048251|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK027430|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK075332|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK315746|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK092843|ZDHHC12|84885|zinc finger, DHHC-type containing 12##NM_032799|ZDHHC12|84885|zinc finger, DHHC-type containing 12	0.451843	CTCF.p2:-23:0.452
chr9	79281009	79281125	reg1017148.p1	8.405	+	AY196297 NM_001097636	-165519	+	AY196296 NM_001097635	-187811	+	NM_001097633 NM_001490 TSC_hg19_v1_chr9_+_79074142 AY196294 AY196295 AL832647	-206951	+	AB535152 FJ808772 FJ808773 BC019095 NM_015225 TSC_hg19_v1_chr9_-_79521026	239885	-	NM_001013735	353503	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	511272	+	AY196297|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097636|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097633|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001490|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196294|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196295|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AL832647|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AB535152|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808772|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808773|PRUNE2|158471|prune homolog 2 (Drosophila)##BC019095|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_015225|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_001013735|FOXB2|442425|forkhead box B2##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)	0.830069	CTCF.p2:-8:0.830
chr12	120763384	120763513	reg1016210.p1	8.404	+	NM_012240 TSC_hg19_v1_chr12_+_120740123 BC034736 AF083109 BC109319 BC109320	-23306	+	TSC_hg19_v1_chr12_-_120703574 NM_001080855 NM_001243756 NM_002859	-59858	-	TSC_hg19_v1_chr12_-_120703534 AK299486 BC136787 BC136794 BC144410 U14588 AB209034 AK298057 AK314204	-59934	-	AB464016 EU832774 GQ129318 AK311830 BC005386 BC013384 BC106725 BC106726 M21054 NM_000928	2125	-	AB463899 AB012851 NM_002442 TSC_hg19_v1_chr12_-_120806968	43488	-	TSC_hg19_v1_chr12_+_120875920 AK312009 NM_004373 BC107861 BC070186 BC007723 DQ893099 DQ896371	112462	+	NM_012240|SIRT4|23409|sirtuin 4##BC034736|SIRT4|23409|sirtuin 4##AF083109|SIRT4|23409|sirtuin 4##BC109319|SIRT4|23409|sirtuin 4##BC109320|SIRT4|23409|sirtuin 4##NM_001080855|PXN|5829|paxillin##NM_001243756|PXN|5829|paxillin##NM_002859|PXN|5829|paxillin##AK299486|PXN|5829|paxillin##BC136787|PXN|5829|paxillin##BC136794|PXN|5829|paxillin##BC144410|PXN|5829|paxillin##U14588|PXN|5829|paxillin##AB209034|PXN|5829|paxillin##AK298057|PXN|5829|paxillin##AK314204|PXN|5829|paxillin##EU832774|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##GQ129318|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##AK311830|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC005386|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC013384|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106725|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106726|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##M21054|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##NM_000928|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##AB012851|MSI1|4440|musashi homolog 1 (Drosophila)##NM_002442|MSI1|4440|musashi homolog 1 (Drosophila)##AK312009|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##NM_004373|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC107861|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC070186|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC007723|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ893099|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ896371|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1	0.990745	CTCF.p2:-13:0.991
chr2	68585180	68585312	reg1018143.p1	8.404	+	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	-38146	-	TSC_hg19_v1_chr2_-_68479665 AK307136 AK314893 BC027913 NM_000945	-105651	-	TSC_hg19_v1_chr2_+_68384999 BC008304 NM_020143 AK291715 AF349314 AF164799 AK313204 AK223118 L48692 AK225641 BC018152	-200149	+	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	7126	+	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	7211	+	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	109164	-	NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC008304|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_020143|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK291715|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF349314|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF164799|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK313204|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK223118|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK225641|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##BC018152|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin##DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48	0.0	
chr3	158970703	158970821	reg1017501.p1	8.404	+	TSC_hg19_v1_chr3_+_158787146 BC137464 BC137469 BC144658	-183611	+	NM_001042705 NM_001042706 NM_001197100 NM_001197113 NM_001197114 AK309049 DQ309553 DQ309554 TSC_hg19_v1_chr3_+_158787130 AK096479	-183675	+	TSC_hg19_v1_chr3_+_158519925 AK301680	-450828	+	BC036535 NM_001197107 NM_001197108 NM_014575 TSC_hg19_v1_chr3_+_158991047	20280	+	TSC_hg19_v1_chr3_+_158991090 AK314662	20329	+	TSC_hg19_v1_chr3_+_159481881 AK309223	511200	+	BC137464|IQCJ|654502|IQ motif containing J##BC137469|IQCJ|654502|IQ motif containing J##BC144658|IQCJ|654502|IQ motif containing J##NM_001042705|IQCJ|654502|IQ motif containing J##NM_001042706|IQCJ|654502|IQ motif containing J##NM_001197100|IQCJ|654502|IQ motif containing J##NM_001197113|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##NM_001197114|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##AK309049|IQCJ|654502|IQ motif containing J##DQ309553|IQCJ|654502|IQ motif containing J##DQ309554|IQCJ|654502|IQ motif containing J##AK096479|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##AK301680|MFSD1|64747|major facilitator superfamily domain containing 1##BC036535|SCHIP1|29970|schwannomin interacting protein 1##NM_001197107|SCHIP1|29970|schwannomin interacting protein 1##NM_001197108|SCHIP1|29970|schwannomin interacting protein 1##NM_014575|SCHIP1|29970|schwannomin interacting protein 1##AK314662|SCHIP1|29970|schwannomin interacting protein 1##AK309223|SCHIP1|29970|schwannomin interacting protein 1	0.912593	CTCF.p2:9:0.913
chr10	23819130	23819241	reg1016498.p1	8.403	+	AB188491 NM_001145373 TSC_hg19_v1_chr10_+_23728216	-90975	+	BC035732 NM_153714	-185414	-	AB463998 NM_178161	-337727	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	164492	+	AK091142 AX746804 NM_001098501 NM_019590 TSC_hg19_v1_chr10_+_24497850	678603	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	678909	+	AB188491|OTUD1|220213|OTU domain containing 1##NM_001145373|OTUD1|220213|OTU domain containing 1##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67##NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a##AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217##AK091142|KIAA1217|56243|KIAA1217##NM_001098501|KIAA1217|56243|KIAA1217##NM_019590|KIAA1217|56243|KIAA1217##AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217	0.945547	CTCF.p2:-2:0.946
chr14	25501774	25501883	reg1015721.p1	8.403	+	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-398410	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-422967	-	AB590242 CR456807 CR541704 DQ893067 DQ896320 M16117 TSC_hg19_v1_chr14_-_25045457 AK225914 BC014460 NM_001911	-456382	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	17410	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1565160	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	3734400	+	AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##CR456807|CTSG|1511|cathepsin G##CR541704|CTSG|1511|cathepsin G##DQ893067|CTSG|1511|cathepsin G##DQ896320|CTSG|1511|cathepsin G##M16117|CTSG|1511|cathepsin G##AK225914|CTSG|1511|cathepsin G##BC014460|CTSG|1511|cathepsin G##NM_001911|CTSG|1511|cathepsin G##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1	0.081898	
chr5	64397039	64397169	reg1015712.p1	8.402	+	BX647971 TSC_hg19_v1_chr5_+_64064766 NM_005869 AK225161 AK225105 AK308223 AK312954 AY358569 AF039692 BC012117	-332320	+	TSC_hg19_v1_chr5_-_64064491 AK094073 AX748442 NM_173829	-332600	-	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	-332658	-	AY692424 NM_197941 AY692422	380620	-	TSC_hg19_v1_chr5_-_64858996 AF315941 BC005400 BC008504 NM_022145	461860	-	TSC_hg19_v1_chr5_+_64859122 AK025679 AK093675 AK300022 AK298175 AK301654 NM_015342 BC015385 AB384434 CU677289 GQ129262 GQ129263 D38552	462014	+	BX647971|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##NM_005869|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225161|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225105|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK308223|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK312954|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AY358569|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AF039692|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##BC012117|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK094073|SREK1IP1|285672|SREK1-interacting protein 1##NM_173829|SREK1IP1|285672|SREK1-interacting protein 1##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1##AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AF315941|CENPK|64105|centromere protein K##BC005400|CENPK|64105|centromere protein K##BC008504|CENPK|64105|centromere protein K##NM_022145|CENPK|64105|centromere protein K##AK025679|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK300022|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK298175|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK301654|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##NM_015342|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##BC015385|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129262|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129263|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##D38552|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1	0.661469	CTCF.p2:3:0.661
chr9	1005213	1005318	reg1014810.p2	8.402	+	AF193873 TSC_hg19_v1_chr9_+_977425	-27860	+	NM_021240 BC113584 BC117245	-28300	+	AF130728 AY442914 AY442915 NM_021951 AK313594 AJ276801 AL162131 BC040847 EU446468 AB463577 CU691924	-163502	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	45079	+	TSC_hg19_v1_chr9_+_1050370 Y19052	45105	+	AF130729 NM_181872	45344	+	AF193873|DMRT3|58524|doublesex and mab-3 related transcription factor 3##NM_021240|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC113584|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC117245|DMRT3|58524|doublesex and mab-3 related transcription factor 3##AF130728|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442914|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442915|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021951|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AK313594|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AJ276801|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AL162131|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BC040847|DMRT1|1761|doublesex and mab-3 related transcription factor 1##EU446468|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2	0.0	
chrX	130917679	130917819	reg1014723.p2	8.402	+	BC137050 AB529233 NM_001004486	-239751	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-494337	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-494487	-	TSC_hg19_v1_chrX_-_130964633 AK097911	46902	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	239572	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	239891	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.07337	
chr20	50582983	50583131	reg1017976.p1	8.401	+	AY170621 AY170622 AY172738 BC111714 AK001666 NM_020436	-164061	-	TSC_hg19_v1_chr20_-_50384925 NM_006045	-198129	-	TSC_hg19_v1_chr20_-_50384875 AB385363 AB014511 AK299064	-198179	-	BT009760 AB527686 BC021087 AK001744 TSC_hg19_v1_chr20_-_50808313 AK090547 BC031524 AK001596 AK222712	225198	-	BC012759 BC041622 NM_018197 NM_022088 NM_199426 NM_199427	225466	-	BX640770 NM_173485	1005888	+	AY170621|SALL4|57167|sal-like 4 (Drosophila)##AY170622|SALL4|57167|sal-like 4 (Drosophila)##AY172738|SALL4|57167|sal-like 4 (Drosophila)##BC111714|SALL4|57167|sal-like 4 (Drosophila)##AK001666|SALL4|57167|sal-like 4 (Drosophila)##NM_020436|SALL4|57167|sal-like 4 (Drosophila)##NM_006045|ATP9A|10079|ATPase, class II, type 9A##AB014511|ATP9A|10079|ATPase, class II, type 9A##AK299064|ATP9A|10079|ATPase, class II, type 9A##BT009760|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC021087|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001744|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK090547|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC031524|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001596|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK222712|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC012759|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC041622|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_018197|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_022088|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199426|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199427|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2	0.872205	CTCF.p2:3:0.872
chr2	231475968	231476148	reg1000321.p1	8.401	+	AK091898 NM_001206704	-194588	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-195102	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-195139	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	101488	+	TSC_hg19_v1_chr2_+_231577633 BC020570	101586	+	AK292382 NM_001130849 NM_001130850 AK315692	102220	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.074057	
chr1	45037883	45037981	reg1015186.p2	8.400	+	AK056424 TSC_hg19_v1_chr1_+_44870926 BC034221 NM_018150	-166990	+	TSC_hg19_v1_chr1_-_44820942 AK026596	-216971	-	TSC_hg19_v1_chr1_-_44820938 AK290567 NM_024066	-216996	-	TSC_hg19_v1_chr1_+_45097700 AK296038 AK225180	59830	+	CR457348 AK026006 AK225405 TSC_hg19_v1_chr1_-_45140099 BC064520 NM_024587 AL832539	102155	-	AK296548 TSC_hg19_v1_chr1_-_45140143 BC007521	102216	-	AK056424|RNF220|55182|ring finger protein 220##BC034221|RNF220|55182|ring finger protein 220##NM_018150|RNF220|55182|ring finger protein 220##AK026596|ERI3|79033|ERI1 exoribonuclease family member 3##AK290567|ERI3|79033|ERI1 exoribonuclease family member 3##NM_024066|ERI3|79033|ERI1 exoribonuclease family member 3##AK296038|RNF220|55182|ring finger protein 220##AK225180|RNF220|55182|ring finger protein 220##CR457348|TMEM53|79639|transmembrane protein 53##AK026006|TMEM53|79639|transmembrane protein 53##AK225405|TMEM53|79639|transmembrane protein 53##BC064520|TMEM53|79639|transmembrane protein 53##NM_024587|TMEM53|79639|transmembrane protein 53##AL832539|TMEM53|79639|transmembrane protein 53##AK296548|TMEM53|79639|transmembrane protein 53##BC007521|TMEM53|79639|transmembrane protein 53	0.992049	CTCF.p2:-2:0.992
chr21	16964707	16964842	reg1015823.p1	8.400	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	-527557	-	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	-1046125	-	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-1209301	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	137551	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	137767	+	TSC_hg19_v1_chr21_+_18885168 NM_001207063 NM_001207064 NM_001207065 NM_001207066 NM_001338	1920389	+	AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25##NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor	0.968268	CTCF.p2:20:0.968
chrX	70870543	70870669	reg1015303.p1	8.400	+	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	-32274	-	NM_052957	-72733	+	TSC_hg19_v1_chrX_+_70765496 AL050366	-105084	+	NM_001145139 NM_001145140	67528	-	NM_001145139 NM_001145140	112533	+	TSC_hg19_v1_chrX_+_71130694 NM_001013627	260172	+	AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_052957|ACRC|93953|acidic repeat containing##AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001013627|NHSL2|340527|NHS-like 2	0.063757	
chr11	6552625	6552783	reg1018284.p1	8.399	+	AK096944 NM_144666 NM_173589 BX648742	-34195	+	TSC_hg19_v1_chr11_+_6502737 NM_012192 AF183415 AF150105 AK002130 AK058048 AK311763 BC011014 AF152355	-49963	+	TSC_hg19_v1_chr11_-_6502563 AK311655 AK300855 AK304512 AK309198 AK301856 AK301972 NM_001242854 NM_001242855 NM_001242856 NM_012402	-50069	-	D87060 AB385327 AB007869 TSC_hg19_v1_chr11_-_6624836 BC001071	72079	-	TSC_hg19_v1_chr11_-_6624837 NM_015324	72160	-	TSC_hg19_v1_chr11_+_6624983 AK293474 NM_001014794 NM_004517	72247	+	AK096944|DNHD1|144132|dynein heavy chain domain 1##NM_144666|DNHD1|144132|dynein heavy chain domain 1##NM_173589|DNHD1|144132|dynein heavy chain domain 1##BX648742|DNHD1|144132|dynein heavy chain domain 1##NM_012192|FXC1|26515|fracture callus 1 homolog (rat)##AF183415|FXC1|26515|fracture callus 1 homolog (rat)##AF150105|FXC1|26515|fracture callus 1 homolog (rat)##AK002130|FXC1|26515|fracture callus 1 homolog (rat)##AK058048|FXC1|26515|fracture callus 1 homolog (rat)##AK311763|FXC1|26515|fracture callus 1 homolog (rat)##BC011014|FXC1|26515|fracture callus 1 homolog (rat)##AF152355|FXC1|26515|fracture callus 1 homolog (rat)##AK311655|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK300855|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK304512|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK309198|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK301856|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##AK301972|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##NM_001242854|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##NM_001242855|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##NM_001242856|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##NM_012402|ARFIP2|23647|ADP-ribosylation factor interacting protein 2##D87060|RRP8|23378|ribosomal RNA processing 8, methyltransferase, homolog (yeast)##AB007869|RRP8|23378|ribosomal RNA processing 8, methyltransferase, homolog (yeast)##BC001071|RRP8|23378|ribosomal RNA processing 8, methyltransferase, homolog (yeast)##NM_015324|RRP8|23378|ribosomal RNA processing 8, methyltransferase, homolog (yeast)##AK293474|ILK|3611|integrin-linked kinase##NM_001014794|ILK|3611|integrin-linked kinase##NM_004517|ILK|3611|integrin-linked kinase	0.0	
chr1	93903673	93903792	reg1015058.p1	8.399	+	BC002809 TSC_hg19_v1_chr1_+_93811500	-92232	+	TSC_hg19_v1_chr1_+_93811491 AK057541 AL833729	-92239	+	TSC_hg19_v1_chr1_+_93811479 BC035507 NM_001938 BC068553	-92254	+	TSC_hg19_v1_chr1_+_93913680 NM_001024948 NM_001164473 NM_017737 AY514449	9990	+	TSC_hg19_v1_chr1_+_94057524 AK307291	153808	+	TSC_hg19_v1_chr1_+_94057602 BC084562	153875	+	BC002809|DR1|1810|down-regulator of transcription 1, TBP-binding (negative cofactor 2)##AK057541|DR1|1810|down-regulator of transcription 1, TBP-binding (negative cofactor 2)##AL833729|DR1|1810|down-regulator of transcription 1, TBP-binding (negative cofactor 2)##BC035507|DR1|1810|down-regulator of transcription 1, TBP-binding (negative cofactor 2)##NM_001938|DR1|1810|down-regulator of transcription 1, TBP-binding (negative cofactor 2)##BC068553|DR1|1810|down-regulator of transcription 1, TBP-binding (negative cofactor 2)##NM_001024948|FNBP1L|54874|formin binding protein 1-like##NM_001164473|FNBP1L|54874|formin binding protein 1-like##NM_017737|FNBP1L|54874|formin binding protein 1-like##AY514449|FNBP1L|54874|formin binding protein 1-like##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##BC084562|LOC100129046|100129046|uncharacterized LOC100129046	0.918083	CTCF.p2:-15:0.918
chrX	132804547	132804664	reg1016721.p1	8.398	+	TSC_hg19_v1_chrX_-_132549514 AK312605 AY358507 BC017166	-255137	-	AB528412 CU677845 DQ891809 DQ894992 AF064826 AY052833 AF030186 NM_001448 TSC_hg19_v1_chrX_-_132549316	-255431	-	EU446842 BC074762 BC117336 BC126361 AB464736 AF219119 NM_016521	-452365	-	AB527294 CU690242 DQ349136 DQ349137 DQ349138 DQ893658 DQ895822 TSC_hg19_v1_chrX_-_133119622 Z37987 L47176 AK222761 AK222766 AK310689 BC035972 U50410	314944	-	TSC_hg19_v1_chrX_-_133119645 L47125 AK300168 NM_001164617 NM_001164618 NM_001164619 NM_004484	315046	-	NM_001101357	566471	+	AK312605|GPC4|2239|glypican 4##AY358507|GPC4|2239|glypican 4##BC017166|GPC4|2239|glypican 4##DQ891809|GPC4|2239|glypican 4##DQ894992|GPC4|2239|glypican 4##AF064826|GPC4|2239|glypican 4##AY052833|GPC4|2239|glypican 4##AF030186|GPC4|2239|glypican 4##NM_001448|GPC4|2239|glypican 4##EU446842|TFDP3|51270|transcription factor Dp family, member 3##BC074762|TFDP3|51270|transcription factor Dp family, member 3##BC117336|TFDP3|51270|transcription factor Dp family, member 3##BC126361|TFDP3|51270|transcription factor Dp family, member 3##AF219119|TFDP3|51270|transcription factor Dp family, member 3##NM_016521|TFDP3|51270|transcription factor Dp family, member 3##DQ349136|GPC3|2719|glypican 3##DQ349137|GPC3|2719|glypican 3##DQ349138|GPC3|2719|glypican 3##DQ893658|GPC3|2719|glypican 3##DQ895822|GPC3|2719|glypican 3##Z37987|GPC3|2719|glypican 3##L47176|GPC3|2719|glypican 3##AK222761|GPC3|2719|glypican 3##AK222766|GPC3|2719|glypican 3##AK310689|GPC3|2719|glypican 3##BC035972|GPC3|2719|glypican 3##U50410|GPC3|2719|glypican 3##L47125|GPC3|2719|glypican 3##AK300168|GPC3|2719|glypican 3##NM_001164617|GPC3|2719|glypican 3##NM_001164618|GPC3|2719|glypican 3##NM_001164619|GPC3|2719|glypican 3##NM_004484|GPC3|2719|glypican 3##NM_001101357|CCDC160|347475|coiled-coil domain containing 160	0.743381	CTCF.p2:18:0.743
chr12	40158918	40159029	reg1016161.p1	8.397	+	BC038754 NM_001031748 BC048120 AK097445	-138978	+	AK314254 NM_005164	-145131	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	-321974	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	340716	-	TSC_hg19_v1_chr12_-_40499870 BC047507	340899	-	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	459886	+	BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2	0.012698	
chr13	31254016	31254147	reg1017700.p1	8.397	+	NM_005800 BC038103 TSC_hg19_v1_chr13_+_31192056 BC036027 AK289826 CR627370 X59131 BC012594 AL832776	-62118	+	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	-62454	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	-214023	-	AK314143 NM_001204406	33533	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	55583	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	55634	+	NM_005800|USPL1|10208|ubiquitin specific peptidase like 1##BC038103|USPL1|10208|ubiquitin specific peptidase like 1##BC036027|USPL1|10208|ubiquitin specific peptidase like 1##AK289826|USPL1|10208|ubiquitin specific peptidase like 1##CR627370|USPL1|10208|ubiquitin specific peptidase like 1##X59131|USPL1|10208|ubiquitin specific peptidase like 1##BC012594|USPL1|10208|ubiquitin specific peptidase like 1##AL832776|USPL1|10208|ubiquitin specific peptidase like 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein	0.0	
chr3	12748094	12748221	reg1015221.p2	8.397	+	TSC_hg19_v1_chr3_-_12705626 NM_002880	-42483	-	TSC_hg19_v1_chr3_-_12705617 BC018119 AK226028 AK303561	-42542	-	TSC_hg19_v1_chr3_-_12705590 X03484 AK312248	-42690	-	AK001898 BC020658 AK092470 AX747561 NM_018306	52616	-	GU727621 NM_001162499 NM_012298 BC136592 AB014567	90049	+	NM_001007074	133791	-	NM_002880|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##BC018119|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK226028|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK303561|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##X03484|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK312248|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK001898|TMEM40|55287|transmembrane protein 40##BC020658|TMEM40|55287|transmembrane protein 40##AK092470|TMEM40|55287|transmembrane protein 40##NM_018306|TMEM40|55287|transmembrane protein 40##GU727621|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_001162499|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_012298|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##BC136592|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##AB014567|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_001007074|RPL32|6161|ribosomal protein L32	1.043825	CTCF.p2:-3:0.959
chr22	38003184	38003315	reg1016071.p1	8.396	+	M87842 BC059782 NM_006498 CR456512	-27249	-	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	-46776	+	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	-87942	-	TSC_hg19_v1_chr22_+_38004480 NM_001001560 NM_001001561 NM_001172687 NM_013365 AK075256	1313	+	TSC_hg19_v1_chr22_+_38004843 CR456493 BC010917 AK290548 BC029388 AK225157 BC044629 AF190862 AF233521 AF218584	1521	+	TSC_hg19_v1_chr22_+_38004869 AB463055 CU013090 CU013378 CU692224	1634	+	M87842|LGALS2|3957|lectin, galactoside-binding, soluble, 2##BC059782|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_006498|LGALS2|3957|lectin, galactoside-binding, soluble, 2##CR456512|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10##NM_001001560|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001001561|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001172687|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_013365|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK075256|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CR456493|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC010917|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK290548|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC029388|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK225157|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC044629|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF190862|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF233521|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF218584|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CU013090|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CU013378|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1	0.836355	CTCF.p2:-16:0.836
chr3	169462525	169462634	reg1014937.p1	8.396	+	BC069498 GQ352634 U43292 AK304098 NM_001205194 NM_004991	-81090	-	BX640908 NM_001164000	-597058	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	-598217	-	BC128029 TSC_hg19_v1_chr3_-_169482848	20269	-	BC007289 AK055346 NM_032487	25063	-	TSC_hg19_v1_chr3_+_169490577 AK092022	28017	+	BC069498|MECOM|2122|MDS1 and EVI1 complex locus##GQ352634|MECOM|2122|MDS1 and EVI1 complex locus##U43292|MECOM|2122|MDS1 and EVI1 complex locus##AK304098|MECOM|2122|MDS1 and EVI1 complex locus##NM_001205194|MECOM|2122|MDS1 and EVI1 complex locus##NM_004991|MECOM|2122|MDS1 and EVI1 complex locus##BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BC128029|TERC|7012|telomerase RNA component##BC007289|ARPM1|84517|actin related protein M1##AK055346|ARPM1|84517|actin related protein M1##NM_032487|ARPM1|84517|actin related protein M1##AK092022|MYNN|55892|myoneurin	0.910589	CTCF.p2:4:0.911
chr5	179084959	179085108	reg1014705.p2	8.396	+	BC043435 BC040992 BC130442 BC130444 BC144274 BC144275 NM_001142306	-13008	-	TSC_hg19_v1_chr5_-_179051599 AK124530	-33406	-	TSC_hg19_v1_chr5_-_179050676 NM_005520	-34332	-	NM_001164444	22941	-	TSC_hg19_v1_chr5_+_179125381 AK294702	40401	+	TSC_hg19_v1_chr5_+_179125927 NM_001024649 NM_001746	40831	+	BC043435|C5orf60|285679|chromosome 5 open reading frame 60##BC040992|C5orf60|285679|chromosome 5 open reading frame 60##BC130442|C5orf60|285679|chromosome 5 open reading frame 60##BC130444|C5orf60|285679|chromosome 5 open reading frame 60##BC144274|C5orf60|285679|chromosome 5 open reading frame 60##BC144275|C5orf60|285679|chromosome 5 open reading frame 60##NM_001142306|C5orf60|285679|chromosome 5 open reading frame 60##AK124530|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)##NM_005520|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)##NM_001164444|CBY3|646019|chibby homolog 3 (Drosophila)##AK294702|CANX|821|calnexin##NM_001024649|CANX|821|calnexin##NM_001746|CANX|821|calnexin	0.976865	CTCF.p2:-21:0.977
chr12	80663867	80663977	reg1016985.p1	8.395	+	NM_173591	-60690	+	AF458589 BC092481 NM_001143885 NM_001244990	-334688	-	TSC_hg19_v1_chr12_-_80328937 NM_002480	-334956	-	NM_001145026	174203	+	NM_002469 AK313287 X52011 BC017834 AB587443 CU676084 DQ893248 DQ896577 CR407641 CR541763	437530	+	TSC_hg19_v1_chr12_+_81110690 NM_005593 BC069373 X14894 AB528948 BT019399	446843	+	NM_173591|OTOGL|283310|otogelin-like##AF458589|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC092481|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143885|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001244990|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_002480|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q##NM_002469|MYF6|4618|myogenic factor 6 (herculin)##AK313287|MYF6|4618|myogenic factor 6 (herculin)##X52011|MYF6|4618|myogenic factor 6 (herculin)##BC017834|MYF6|4618|myogenic factor 6 (herculin)##DQ893248|MYF6|4618|myogenic factor 6 (herculin)##DQ896577|MYF6|4618|myogenic factor 6 (herculin)##CR407641|MYF6|4618|myogenic factor 6 (herculin)##CR541763|MYF6|4618|myogenic factor 6 (herculin)##NM_005593|MYF5|4617|myogenic factor 5##BC069373|MYF5|4617|myogenic factor 5##X14894|MYF5|4617|myogenic factor 5##BT019399|MYF5|4617|myogenic factor 5	0.991367	CTCF.p2:7:0.991
chr8	21763603	21763726	reg1014998.p2	8.395	+	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	-117298	-	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	-117872	-	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	-1650918	-	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	7501	-	TSC_hg19_v1_chr8_+_21777194 NM_015024 BC030785	13525	+	TSC_hg19_v1_chr8_+_21777257 AK291472 AB018288 AF064729 CU689010	13584	+	BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa##NM_015024|XPO7|23039|exportin 7##BC030785|XPO7|23039|exportin 7##AK291472|XPO7|23039|exportin 7##AB018288|XPO7|23039|exportin 7##AF064729|XPO7|23039|exportin 7	0.977869	CTCF.p2:7:0.952
chr8	6188912	6189030	reg1016057.p2	8.395	+	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	-1336677	-	AY017307 TSC_hg19_v1_chr8_-_4852228	-1336746	-	AK128880 TSC_hg19_v1_chr8_-_2585966	-3602989	-	TSC_hg19_v1_chr8_-_6264053 BC036625	75086	-	TSC_hg19_v1_chr8_-_6264070 AK025595 BC024246	75103	-	NM_001172574 NM_001172575 NM_024596 BC056195 BC030702 AK308387 TSC_hg19_v1_chr8_+_6264158	75164	+	AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AK025595|LOC100287015|100287015|uncharacterized LOC100287015##NM_001172574|MCPH1|79648|microcephalin 1##NM_001172575|MCPH1|79648|microcephalin 1##NM_024596|MCPH1|79648|microcephalin 1##BC056195|MCPH1|79648|microcephalin 1##BC030702|MCPH1|79648|microcephalin 1##AK308387|MCPH1|79648|microcephalin 1	0.813906	CTCF.p2:4:0.814
chr6	42977007	42977107	reg1016065.p1	8.394	+	AK291797 TSC_hg19_v1_chr6_+_42952346 BC001175 NM_006245 NM_180976 NM_180977 D78360 BC010692 BC001095 AK122701 AB000635 AB000634 AB451342 AB451357 AB527701 EU446999	-24686	+	TSC_hg19_v1_chr6_+_42952326 AK290604	-24731	+	TSC_hg19_v1_chr6_+_42952307 AK299696	-24773	+	BT009831 AB528674 CU674868 L10400 M27937 TSC_hg19_v1_chr6_-_42981627 BC001754 NM_014623	4531	-	TSC_hg19_v1_chr6_-_42981664 AK309759	4603	-	NM_057161 TSC_hg19_v1_chr6_+_42981954 AK308917	4840	+	AK291797|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##BC001175|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##NM_006245|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##NM_180976|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##NM_180977|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##D78360|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##BC010692|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##BC001095|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##AK122701|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##AB000635|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##AB000634|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##AB451342|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##AB451357|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##EU446999|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##AK290604|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##AK299696|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta##BT009831|MEA1|4201|male-enhanced antigen 1##L10400|MEA1|4201|male-enhanced antigen 1##M27937|MEA1|4201|male-enhanced antigen 1##BC001754|MEA1|4201|male-enhanced antigen 1##NM_014623|MEA1|4201|male-enhanced antigen 1##AK309759|MEA1|4201|male-enhanced antigen 1##NM_057161|KLHDC3|116138|kelch domain containing 3##AK308917|KLHDC3|116138|kelch domain containing 3	0.994129	CTCF.p2:1:0.994
chr7	27616073	27616230	reg1015691.p1	8.394	+	AK299188 NM_001989	-333988	+	BC075791 NM_000522 TSC_hg19_v1_chr7_-_27239748	-376407	-	TSC_hg19_v1_chr7_+_27225046 BC025338	-391118	+	TSC_hg19_v1_chr7_-_27702469 AF529362 DQ894677 AK316605 BC020167 AB050000 BC032324	86277	-	TSC_hg19_v1_chr7_-_27702556 AK311650 NM_152740	86426	-	AK299729 NM_001206901	162840	+	AK299188|EVX1|2128|even-skipped homeobox 1##NM_001989|EVX1|2128|even-skipped homeobox 1##BC075791|HOXA13|3209|homeobox A13##NM_000522|HOXA13|3209|homeobox A13##BC025338|HOXA11-AS1|221883|HOXA11 antisense RNA 1 (non-protein coding)##AF529362|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##DQ894677|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AK316605|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##BC020167|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AB050000|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##BC032324|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##NM_152740|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AK299729|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##NM_001206901|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	0.976884	CTCF.p2:9:0.977
chr6	126179981	126180093	reg1015518.p2	8.393	+	TSC_hg19_v1_chr6_+_126112105 BC036461 AK127512 AB074157 AK294558 BX537385 AL832621 AL832628 AB074156	-67929	+	TSC_hg19_v1_chr6_+_126111841 NM_001122842 NM_001199621 NM_181782	-68184	+	TSC_hg19_v1_chr6_+_126102306 AF493978 NM_001199619 NM_001199620 AK307395 BC137094 BC137095	-77703	+	NM_001199622 TSC_hg19_v1_chr6_+_126240392 AK094706	60386	+	TSC_hg19_v1_chr6_+_126277915 NM_138571 BX647228 AK309857 BC015732 AK057688 AJ420577 AY035387 AY035388 AY486460 AY486461 DQ892201 DQ895396	97948	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	127565	+	BC036461|NCOA7|135112|nuclear receptor coactivator 7##AK127512|NCOA7|135112|nuclear receptor coactivator 7##AB074157|NCOA7|135112|nuclear receptor coactivator 7##AK294558|NCOA7|135112|nuclear receptor coactivator 7##BX537385|NCOA7|135112|nuclear receptor coactivator 7##AL832621|NCOA7|135112|nuclear receptor coactivator 7##AL832628|NCOA7|135112|nuclear receptor coactivator 7##AB074156|NCOA7|135112|nuclear receptor coactivator 7##NM_001122842|NCOA7|135112|nuclear receptor coactivator 7##NM_001199621|NCOA7|135112|nuclear receptor coactivator 7##NM_181782|NCOA7|135112|nuclear receptor coactivator 7##AF493978|NCOA7|135112|nuclear receptor coactivator 7##NM_001199619|NCOA7|135112|nuclear receptor coactivator 7##NM_001199620|NCOA7|135112|nuclear receptor coactivator 7##AK307395|NCOA7|135112|nuclear receptor coactivator 7##BC137094|NCOA7|135112|nuclear receptor coactivator 7##BC137095|NCOA7|135112|nuclear receptor coactivator 7##NM_001199622|NCOA7|135112|nuclear receptor coactivator 7##AK094706|NCOA7|135112|nuclear receptor coactivator 7##NM_138571|HINT3|135114|histidine triad nucleotide binding protein 3##BX647228|HINT3|135114|histidine triad nucleotide binding protein 3##AK309857|HINT3|135114|histidine triad nucleotide binding protein 3##BC015732|HINT3|135114|histidine triad nucleotide binding protein 3##AK057688|HINT3|135114|histidine triad nucleotide binding protein 3##AJ420577|HINT3|135114|histidine triad nucleotide binding protein 3##AY035387|HINT3|135114|histidine triad nucleotide binding protein 3##AY035388|HINT3|135114|histidine triad nucleotide binding protein 3##AY486460|HINT3|135114|histidine triad nucleotide binding protein 3##AY486461|HINT3|135114|histidine triad nucleotide binding protein 3##DQ892201|HINT3|135114|histidine triad nucleotide binding protein 3##DQ895396|HINT3|135114|histidine triad nucleotide binding protein 3##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)	0.087902	
chr6	46816790	46816931	reg1015889.p1	8.393	+	NM_005588 AK225212 TSC_hg19_v1_chr6_+_46761125 AK315246 AK315840 BC131714 AF478685 AK290282 M82962 BC143649 BC143650 BC143651	-55749	+	NM_001162435 AK304342	-102185	+	BC038452 NM_001168357	-113431	-	TSC_hg19_v1_chr6_-_46825943 BC036002	9088	-	AL832125 AB018301 AK289503 AK092043 AX747330 NM_001098518	72806	-	AY498875 AL050295 NM_015234	105743	-	NM_005588|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AK225212|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AK315246|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AK315840|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC131714|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AF478685|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AK290282|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##M82962|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC143649|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC143650|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC143651|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##NM_001162435|LOC100287718|100287718|uncharacterized LOC100287718##AK304342|LOC100287718|100287718|uncharacterized LOC100287718##BC038452|PLA2G7|7941|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)##NM_001168357|PLA2G7|7941|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)##BC036002|GPR116|221395|G protein-coupled receptor 116##AL832125|GPR116|221395|G protein-coupled receptor 116##AB018301|GPR116|221395|G protein-coupled receptor 116##AK289503|GPR116|221395|G protein-coupled receptor 116##AK092043|GPR116|221395|G protein-coupled receptor 116##NM_001098518|GPR116|221395|G protein-coupled receptor 116##AY498875|GPR116|221395|G protein-coupled receptor 116##AL050295|GPR116|221395|G protein-coupled receptor 116##NM_015234|GPR116|221395|G protein-coupled receptor 116	0.98717	CTCF.p2:-1:0.976
chr1	13683326	13683441	reg1017368.p1	8.392	+	NM_001099854	-9873	-	AK124292 NM_001010890 NM_001098376 BC101343 BC137391 BC171794	-41404	+	BC140755 NM_001012276	-71843	-	NM_001099790 NM_001099850	15021	-	NM_001099851 BC144662 BC146858	32706	+	NM_001099852	53523	+	NM_001099854|PRAMEF14|729528|PRAME family member 14##AK124292|PRAMEF9|343070|PRAME family member 9##NM_001010890|PRAMEF9|343070|PRAME family member 9##NM_001098376|PRAMEF15|653619|PRAME family member 15##BC101343|PRAMEF9|343070|PRAME family member 9##BC137391|PRAMEF9|343070|PRAME family member 9##BC171794|PRAMEF9|343070|PRAME family member 9##BC140755|PRAMEF7|441871|PRAME family member 7##NM_001012276|PRAMEF8|391002|PRAME family member 8##NM_001099790|PRAMEF19|645414|PRAME family member 19##NM_001099850|PRAMEF18|391003|PRAME family member 18##NM_001099851|PRAMEF17|391004|PRAME family member 17##BC144662|PRAMEF17|391004|PRAME family member 17##BC146858|PRAMEF17|391004|PRAME family member 17##NM_001099852|PRAMEF20|645425|PRAME family member 20	0.743859	CTCF.p2:-6:0.744
chr12	44070150	44070272	reg1016459.p2	8.392	+	AF488804 AJ515153 AJ515154 NM_025003	-124488	-	BC114939 BC114940 AF399844 AF543759 AF543760 AK056499 TSC_hg19_v1_chr12_-_42983549 NM_153026	-1086719	-	TSC_hg19_v1_chr12_-_42877811 NM_001144882 NM_001144883	-1192412	-	AL136759 TSC_hg19_v1_chr12_-_44152566 BX647494 NM_001098615 AK097331 AK225903 NM_001098614 BC020781 CR627435 BC068502 AK092030 AX747323 NM_031292	82364	-	AK304583 NM_001114182 NM_001145256 NM_001145257 NM_001145258 NM_016123 AK299944 AK314288 TSC_hg19_v1_chr12_+_44152757	82540	+	TSC_hg19_v1_chr12_+_44152777 BC013316 AY340962 AY340963 AY340964 AY340965 AY340966 AY340967 AF155118 AK000528	82568	+	AF488804|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AJ515153|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AJ515154|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##NM_025003|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##BC114939|PRICKLE1|144165|prickle homolog 1 (Drosophila)##BC114940|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF399844|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543759|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543760|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK056499|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_153026|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AL136759|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BX647494|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098615|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK097331|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK225903|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098614|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC020781|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##CR627435|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC068502|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK092030|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_031292|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK304583|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001114182|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145256|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145257|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145258|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_016123|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK299944|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK314288|IRAK4|51135|interleukin-1 receptor-associated kinase 4##BC013316|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340962|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340963|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340964|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340965|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340966|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340967|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AF155118|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK000528|IRAK4|51135|interleukin-1 receptor-associated kinase 4	0.71473	CTCF.p2:-5:0.649
chr18	66290697	66290812	reg1017461.p1	8.392	+	TSC_hg19_v1_chr18_-_65183956 NM_032160	-1106808	-	AK021849 TSC_hg19_v1_chr18_-_65182656	-1108171	-	AJ007607 NM_021153 AK304000 AK315257 BC015877	-2019443	-	AM393206 AM393295 CU689334 TSC_hg19_v1_chr18_-_66382307 AK307269 AK295551 BC032325 AL832341 AL832356 BC093792 BC093794 BC143400 AB058733	91512	-	TSC_hg19_v1_chr18_-_66382346 AK122715 BC107422 NM_019022 BX647846 AK310389	91682	-	NM_001093729 AK308114 AK091108	91765	+	NM_032160|DSEL|92126|dermatan sulfate epimerase-like##AK021849|DSEL|92126|dermatan sulfate epimerase-like##AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AM393206|TMX3|54495|thioredoxin-related transmembrane protein 3##AM393295|TMX3|54495|thioredoxin-related transmembrane protein 3##AK307269|TMX3|54495|thioredoxin-related transmembrane protein 3##AK295551|TMX3|54495|thioredoxin-related transmembrane protein 3##BC032325|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832341|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832356|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093792|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093794|TMX3|54495|thioredoxin-related transmembrane protein 3##BC143400|TMX3|54495|thioredoxin-related transmembrane protein 3##AB058733|TMX3|54495|thioredoxin-related transmembrane protein 3##AK122715|TMX3|54495|thioredoxin-related transmembrane protein 3##BC107422|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_019022|TMX3|54495|thioredoxin-related transmembrane protein 3##BX647846|TMX3|54495|thioredoxin-related transmembrane protein 3##AK310389|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_001093729|CCDC102B|79839|coiled-coil domain containing 102B##AK308114|CCDC102B|79839|coiled-coil domain containing 102B##AK091108|CCDC102B|79839|coiled-coil domain containing 102B	0.756593	CTCF.p2:27:0.757
chr12	1175571	1175664	reg1015169.p1	8.391	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-75165	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-116791	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-158535	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	527734	-	AY009399 NM_030775	550604	+	BC001749 NM_032642	562794	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.934579	CTCF.p2:-2:0.935
chr14	94879424	94879552	reg1018813.p1	8.391	+	TSC_hg19_v1_chr14_-_94856973 BX161449 BX247968 AK315637 X05826 X05827 NM_001002235 NM_001002236 NM_001127700 NM_001127701 NM_001127702 NM_001127703 NM_001127704 NM_001127705 NM_001127706 NM_001127707	-22497	-	TSC_hg19_v1_chr14_-_94855154 BC011991 NM_000295	-24347	-	K01396 X01683 BC015642 BX248257 TSC_hg19_v1_chr14_-_94854940 AK026174 BC070163	-24541	-	BC146962 BX248259 NM_001080451	39615	-	AY358700 AY220120 AY220119 AK301082 BC111498 AY220121 AY220118 AY185496 AY185497 NM_001042518 NM_175739	63103	-	BC040857 NM_173850	104692	-	BX161449|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BX247968|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##AK315637|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X05826|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X05827|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001002235|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001002236|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127700|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127701|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127702|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127703|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127704|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127705|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127706|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127707|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC011991|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_000295|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##K01396|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X01683|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC015642|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BX248257|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##AK026174|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC070163|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC146962|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##BX248259|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##NM_001080451|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##AY358700|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220120|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220119|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AK301082|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC111498|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220121|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220118|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185496|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185497|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_001042518|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_175739|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC040857|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12##NM_173850|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	0.101256	
chr14	96763513	96763610	reg1013727.p1	8.391	+	AK291970 AK309528 NM_000710 TSC_hg19_v1_chr14_+_96722546 U30271 AJ238044	-41007	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	-92365	+	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	-92484	+	TSC_hg19_v1_chr14_-_96829651 AK055200 NM_018036	66101	-	TSC_hg19_v1_chr14_+_96829862 AK000796 AK314423 AF151044	66307	+	BC004818 NM_016472	82460	+	AK291970|BDKRB1|623|bradykinin receptor B1##AK309528|BDKRB1|623|bradykinin receptor B1##NM_000710|BDKRB1|623|bradykinin receptor B1##U30271|BDKRB1|623|bradykinin receptor B1##AJ238044|BDKRB1|623|bradykinin receptor B1##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK055200|ATG2B|55102|ATG2 autophagy related 2 homolog B (S. cerevisiae)##NM_018036|ATG2B|55102|ATG2 autophagy related 2 homolog B (S. cerevisiae)##AK000796|C14orf129|51527|chromosome 14 open reading frame 129##AK314423|C14orf129|51527|chromosome 14 open reading frame 129##AF151044|C14orf129|51527|chromosome 14 open reading frame 129##BC004818|C14orf129|51527|chromosome 14 open reading frame 129##NM_016472|C14orf129|51527|chromosome 14 open reading frame 129	0.99181	CTCF.p2:-17:0.992
chr10	89293507	89293645	reg1015192.p1	8.390	+	AK309176 NM_001178118	-25987	+	NM_001178117 NM_004897 TSC_hg19_v1_chr10_+_89264649 AK304624 AK312937 AL050356 AF084943 AB209819 AF084944 AY358938 BC032504 AF046914 CU689404	-29101	+	BC092519 NM_001009610	-176126	+	TSC_hg19_v1_chr10_+_89419623 NM_001015880 NM_004670 BC009894 AK312556 AF091242 AF150754 AF074331 AF173365 DQ893625 DQ895430 AF313907	125969	+	TSC_hg19_v1_chr10_-_89577921 AK075223 NM_032810	284326	-	EU552092 NM_001126049	329617	-	AK309176|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178118|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178117|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_004897|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK304624|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK312937|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AL050356|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF084943|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AB209819|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF084944|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AY358938|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##BC032504|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF046914|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##BC092519|FAM22A|728118|family with sequence similarity 22, member A##NM_001009610|FAM22D|728130|family with sequence similarity 22, member D##NM_001015880|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##NM_004670|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##BC009894|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK312556|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF091242|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF150754|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF074331|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF173365|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ893625|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ895430|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF313907|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK075223|ATAD1|84896|ATPase family, AAA domain containing 1##NM_032810|ATAD1|84896|ATPase family, AAA domain containing 1##EU552092|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_001126049|KLLN|100144748|killin, p53-regulated DNA replication inhibitor	0.029423	
chr11	30355069	30355223	reg1014698.p1	8.390	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	-10494	+	NM_000510 NM_001018080	-102584	+	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	-316615	-	CU689190 NM_001584 U57911	246833	-	TSC_hg19_v1_chr11_-_30605748 AK309809	250602	-	TSC_hg19_v1_chr11_-_30607762 AB209163 AK314833 NM_001145399	252699	-	AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_001584|MPPED2|744|metallophosphoesterase domain containing 2##U57911|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2##AB209163|MPPED2|744|metallophosphoesterase domain containing 2##AK314833|MPPED2|744|metallophosphoesterase domain containing 2##NM_001145399|MPPED2|744|metallophosphoesterase domain containing 2	0.919386	CTCF.p2:2:0.919
chrX	71219095	71219225	reg1017953.p1	8.389	+	TSC_hg19_v1_chrX_+_71130694 NM_001013627	-88382	+	NM_001145139 NM_001145140	-236021	+	NM_001145139 NM_001145140	-281026	-	AB082532 BC151224 NM_001024455 TSC_hg19_v1_chrX_-_71351772	132631	-	AK126598 AY572224 NM_207422	144873	+	NM_001170747 NM_006223 BC093700 BC112281 HQ258728 TSC_hg19_v1_chrX_+_71401606 AB009690 BC005234 BC070288 BC111394 BC104653 AK127605 AF143096	182415	+	NM_001013627|NHSL2|340527|NHS-like 2##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##AB082532|RGAG4|340526|retrotransposon gag domain containing 4##BC151224|RGAG4|340526|retrotransposon gag domain containing 4##NM_001024455|RGAG4|340526|retrotransposon gag domain containing 4##AK126598|FLJ44635|392490|TPT1-like protein##AY572224|FLJ44635|392490|TPT1-like protein##NM_207422|FLJ44635|392490|TPT1-like protein##NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##HQ258728|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	0.848635	CTCF.p2:0:0.849
chr17	78056556	78056708	reg1015373.p1	8.388	+	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	-46184	+	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	-47030	-	BC044939 TSC_hg19_v1_chr17_+_77893233	-163433	+	TSC_hg19_v1_chr17_+_78075349 NM_000152 NM_001079803 NM_001079804	18694	+	AK299462 TSC_hg19_v1_chr17_+_78075368	18732	+	TSC_hg19_v1_chr17_+_78075395 BC040431 BC065262 Y00839	18838	+	NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_000152|GAA|2548|glucosidase, alpha; acid##NM_001079803|GAA|2548|glucosidase, alpha; acid##NM_001079804|GAA|2548|glucosidase, alpha; acid##AK299462|GAA|2548|glucosidase, alpha; acid##BC040431|GAA|2548|glucosidase, alpha; acid##Y00839|GAA|2548|glucosidase, alpha; acid	0.998679	CTCF.p2:5:0.999
chr22	19667248	19667353	reg1014216.p1	8.388	+	AK092561 NM_001130861 NM_003277	-154441	-	TSC_hg19_v1_chr22_-_19512001 CR456420	-155270	-	BT007254 CU012981 CU013269 AB528106 AF000959 AK222466 BC002404 BC019290 BC032363 TSC_hg19_v1_chr22_-_19511925	-155445	-	TSC_hg19_v1_chr22_+_19701984 NM_002688 BC025261 U74628 U85431 Y11593 CR456545 CU013145 CU013433 AB463249 AK295940	34742	+	TSC_hg19_v1_chr22_+_19705981 NM_001009939 AK056273	38639	+	TSC_hg19_v1_chr22_+_19705998 U59632	38720	+	AK092561|CLDN5|7122|claudin 5##NM_001130861|CLDN5|7122|claudin 5##NM_003277|CLDN5|7122|claudin 5##CR456420|CLDN5|7122|claudin 5##BT007254|CLDN5|7122|claudin 5##CU012981|CLDN5|7122|claudin 5##CU013269|CLDN5|7122|claudin 5##AF000959|CLDN5|7122|claudin 5##AK222466|CLDN5|7122|claudin 5##BC002404|CLDN5|7122|claudin 5##BC019290|CLDN5|7122|claudin 5##BC032363|CLDN5|7122|claudin 5##NM_002688|SEPT5|5413|septin 5##BC025261|SEPT5|5413|septin 5##U74628|SEPT5|5413|septin 5##U85431|SEPT5|5413|septin 5##Y11593|SEPT5|5413|septin 5##CR456545|SEPT5|5413|septin 5##CU013145|SEPT5|5413|septin 5##CU013433|SEPT5|5413|septin 5##AK295940|SEPT5|5413|septin 5##NM_001009939|SEPT5|5413|septin 5##AK056273|SEPT5|5413|septin 5##U59632|SEPT5-GP1BB|100526833|SEPT5-GP1BB readthrough	0.999897	CTCF.p2:-4:1.000
chr11	92619608	92619715	reg1016497.p1	8.387	+	NM_001008781	-534400	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-2635251	+	AK290231 NM_001144073 NM_012124	-2663130	-	BC069163 NM_005959 U25341 AY521019	83178	+	TSC_hg19_v1_chr11_-_92930978 CU690400	311326	-	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	311424	-	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4	0.062663	
chr15	60017249	60017340	reg1015231.p1	8.387	+	BC002461 TSC_hg19_v1_chr15_-_59981517 AK308237 NM_004330	-35715	-	TSC_hg19_v1_chr15_-_59981511 U15173	-35820	-	TSC_hg19_v1_chr15_-_59949715 X81713 U21242 U14193 BC000287 BC001919 AK312015 NM_004492	-67644	-	AK290944 NM_012182 TSC_hg19_v1_chr15_+_60296425	279134	+	EF565104 TSC_hg19_v1_chr15_+_60296453	279155	+	TSC_hg19_v1_chr15_+_60296509 AK314075	279255	+	BC002461|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##AK308237|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##NM_004330|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##U15173|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##X81713|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##U21242|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##U14193|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##BC000287|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##BC001919|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##AK312015|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##NM_004492|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##AK290944|FOXB1|27023|forkhead box B1##NM_012182|FOXB1|27023|forkhead box B1##AK314075|FOXB1|27023|forkhead box B1	0.892647	CTCF.p2:-4:0.877
chr20	1447570	1447702	reg1014928.p2	8.387	+	TSC_hg19_v1_chr20_-_1447590 BC002801	-29	-	TSC_hg19_v1_chr20_-_1447490 AB590363 CU678204 DQ893189 DQ896513 AK001511 AF078856 AF086909 AF112211 AK223334 AK297403 AK315433 AF283774 AK223341	-159	-	TSC_hg19_v1_chr20_-_1373754 BC119733 BC119732 NM_000801 NM_001199786 NM_054014	-73854	-	AK093845 NM_001206736 NM_016143 NM_018839	700	-	AY424277 AK095499 AK294440 TSC_hg19_v1_chr20_-_1472067	24399	-	AK297072 TSC_hg19_v1_chr20_-_1472142	24498	-	BC002801|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##DQ893189|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##DQ896513|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK001511|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF078856|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF086909|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF112211|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223334|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK297403|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK315433|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF283774|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223341|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##BC119733|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC119732|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_000801|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_001199786|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_054014|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AK093845|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_001206736|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_016143|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_018839|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AY424277|SIRPB2|284759|signal-regulatory protein beta 2##AK095499|SIRPB2|284759|signal-regulatory protein beta 2##AK294440|SIRPB2|284759|signal-regulatory protein beta 2##AK297072|SIRPB2|284759|signal-regulatory protein beta 2	0.771118	CTCF.p2:26:0.771
chr3	188466932	188467050	reg1015547.p2	8.387	+	NM_001167671 BC130584 BC144076	-523757	+	NM_005578 U49957	-536271	+	TSC_hg19_v1_chr3_-_187871925 BC042414	-595121	-	TSC_hg19_v1_chr3_+_188664993 AK123232	197979	+	AK125682 NM_198485 BC101550 BC101552	422820	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	882268	+	NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma##U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC042414|LPP-AS2|339929|LPP antisense RNA 2 (non-protein coding)##AK123232|TPRG1|285386|tumor protein p63 regulated 1##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63	0.011651	
chr5	133242154	133242295	reg1017963.p1	8.387	+	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	-293986	-	TSC_hg19_v1_chr5_-_132948202 AK055684	-294025	-	TSC_hg19_v1_chr5_+_132432890 AK315862	-809333	+	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	62151	-	TSC_hg19_v1_chr5_-_133340377 BC008482	98143	-	TSC_hg19_v1_chr5_-_133340386 BC090042	98159	-	NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##AK055684|FSTL4|23105|follistatin-like 4##AK315862|HSPA4|3308|heat shock 70kDa protein 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15##BC008482|VDAC1|7416|voltage-dependent anion channel 1##BC090042|VDAC1|7416|voltage-dependent anion channel 1	0.0	
chr3	5268608	5268717	reg1014206.p2	8.386	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-39171	+	TSC_hg19_v1_chr3_+_5229430 D86967	-39229	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	-39299	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	1634137	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	1634236	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	3274668	-	DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK124088|LOC100288428|100288428|uncharacterized LOC100288428	0.0	
chr10	107557136	107557258	reg1016163.p2	8.385	+	BC117417 TSC_hg19_v1_chr10_+_106401047	-1156152	+	AB028982 NM_014978	-1156339	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-1443656	+	TSC_hg19_v1_chr10_-_108459000 AK123752	901862	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	1367179	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	4126012	-	BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.541004	CTCF.p2:-8:0.541
chr19	40334675	40334829	reg1016476.p1	8.385	+	BC019609 BC015218 TSC_hg19_v1_chr19_-_40331308 AB451384 BT006830 BT020144 CR457069	-3461	-	TSC_hg19_v1_chr19_-_40324779 AF205861 BC025291 AK074971 BC009688 AK302127 BC018751 NM_004714 NM_006483 NM_006484 Y17999	-9954	-	NM_001143832	-67519	+	AB463635 M59849 TSC_hg19_v1_chr19_-_40336992	2216	-	TSC_hg19_v1_chr19_-_40337007 BC019260 AK308649	2254	-	AK296950 TSC_hg19_v1_chr19_-_40337020 NM_001436	2283	-	BC019609|FBL|2091|fibrillarin##BC015218|FBL|2091|fibrillarin##AB451384|FBL|2091|fibrillarin##BT006830|FBL|2091|fibrillarin##BT020144|FBL|2091|fibrillarin##CR457069|FBL|2091|fibrillarin##AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_001143832|LEUTX|342900|leucine twenty homeobox##M59849|FBL|2091|fibrillarin##BC019260|FBL|2091|fibrillarin##AK308649|FBL|2091|fibrillarin##AK296950|FBL|2091|fibrillarin##NM_001436|FBL|2091|fibrillarin	0.016746	
chr10	133252537	133252639	reg1016799.p1	8.384	+	BC042951 NM_174937 TSC_hg19_v1_chr10_-_133110013	-142587	-	TSC_hg19_v1_chr10_-_133109808 BC093639 BC101535	-142768	-	TSC_hg19_v1_chr10_+_131934681 AJ010841 AB463691	-1317873	+	CU692440 AB528671 U15174 BC009342 BC080643 TSC_hg19_v1_chr10_-_133795428 AK222626 AK295136 BC021989 AF002697 NM_004052	542788	-	TSC_hg19_v1_chr10_-_133795461 BC067818	542881	-	NM_001105521	665724	+	BC042951|TCERG1L|256536|transcription elongation regulator 1-like##NM_174937|TCERG1L|256536|transcription elongation regulator 1-like##BC093639|TCERG1L|256536|transcription elongation regulator 1-like##BC101535|TCERG1L|256536|transcription elongation regulator 1-like##AJ010841|GLRX3|10539|glutaredoxin 3##U15174|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC009342|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC080643|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK222626|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK295136|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC021989|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AF002697|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_004052|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC067818|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_001105521|JAKMIP3|282973|Janus kinase and microtubule interacting protein 3	0.226017	CTCF.p2:-13:0.226
chr2	188163978	188164106	reg1016467.p1	8.384	+	AK128006 BC031094 NM_182521	-450146	-	TSC_hg19_v1_chr2_+_187558788 AK091423 AK289737 AX746973 BC060872 NM_177454 AF361495 CU687488	-605266	+	AK302990 NM_001144999	-699111	+	DQ280491 U17473 L76380 AK291630 AK292998 DQ280490 NM_005795	148904	-	J03225 AF021834 TSC_hg19_v1_chr2_-_188419163 AK313562 BC015514 BC014332	255068	-	TSC_hg19_v1_chr2_-_188419185 NM_001032281 NM_006287	255159	-	AK128006|ZSWIM2|151112|zinc finger, SWIM-type containing 2##BC031094|ZSWIM2|151112|zinc finger, SWIM-type containing 2##NM_182521|ZSWIM2|151112|zinc finger, SWIM-type containing 2##AK091423|FAM171B|165215|family with sequence similarity 171, member B##AK289737|FAM171B|165215|family with sequence similarity 171, member B##BC060872|FAM171B|165215|family with sequence similarity 171, member B##NM_177454|FAM171B|165215|family with sequence similarity 171, member B##AF361495|FAM171B|165215|family with sequence similarity 171, member B##AK302990|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##NM_001144999|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##DQ280491|CALCRL|10203|calcitonin receptor-like##U17473|CALCRL|10203|calcitonin receptor-like##L76380|CALCRL|10203|calcitonin receptor-like##AK291630|CALCRL|10203|calcitonin receptor-like##AK292998|CALCRL|10203|calcitonin receptor-like##NM_005795|CALCRL|10203|calcitonin receptor-like##J03225|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AF021834|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK313562|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC015514|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC014332|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)	0.915028	CTCF.p2:-2:0.915
chrX	22154152	22154289	reg1018970.p1	8.384	+	NM_000444 U87284 AD000712 AK298030 BC105057 BC105059 U75645 U60475	-103195	+	NM_004595 TSC_hg19_v1_chrX_+_21958824 AD001528 AK293455 AK313834 BC009898 BC085621 EU176347	-195394	+	AK091850 NM_206923	-280116	+	GQ355336 NM_152577 AK098601 BC074910 BC126190 BC126192 HQ258412 HQ258552	136848	+	AY039237 NM_182699 BC067878 BC051703	863864	+	AK298796 NM_173495 AK054858 BC121061	1198840	+	NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##NM_004595|SMS|6611|spermine synthase##AD001528|SMS|6611|spermine synthase##AK293455|SMS|6611|spermine synthase##AK313834|SMS|6611|spermine synthase##BC009898|SMS|6611|spermine synthase##BC085621|SMS|6611|spermine synthase##EU176347|SMS|6611|spermine synthase##AK091850|YY2|404281|YY2 transcription factor##NM_206923|YY2|404281|YY2 transcription factor##GQ355336|ZNF645|158506|zinc finger protein 645##NM_152577|ZNF645|158506|zinc finger protein 645##AK098601|ZNF645|158506|zinc finger protein 645##BC074910|ZNF645|158506|zinc finger protein 645##BC126190|ZNF645|158506|zinc finger protein 645##BC126192|ZNF645|158506|zinc finger protein 645##HQ258412|ZNF645|158506|zinc finger protein 645##HQ258552|ZNF645|158506|zinc finger protein 645##AY039237|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##NM_182699|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC067878|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC051703|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##AK298796|PTCHD1|139411|patched domain containing 1##NM_173495|PTCHD1|139411|patched domain containing 1##AK054858|PTCHD1|139411|patched domain containing 1##BC121061|PTCHD1|139411|patched domain containing 1	0.231914	CTCF.p2:-5:0.232
chr10	102758979	102759080	reg1014626.p2	8.383	+	TSC_hg19_v1_chr10_+_102758072 AK298208	-923	+	TSC_hg19_v1_chr10_+_102756830 NM_032429 BC006212	-2133	+	TSC_hg19_v1_chr10_+_102747299 AK308098 NM_001163812 NM_001163813 NM_001163814 NM_021830 AK297068 BX640829	-11715	+	AB058716 TSC_hg19_v1_chr10_+_102759264	219	+	BC058938 TSC_hg19_v1_chr10_+_102759622	617	+	TSC_hg19_v1_chr10_-_102790862 AK024422	31829	-	AK298208|LZTS2|84445|leucine zipper, putative tumor suppressor 2##NM_032429|LZTS2|84445|leucine zipper, putative tumor suppressor 2##BC006212|LZTS2|84445|leucine zipper, putative tumor suppressor 2##AK308098|C10orf2|56652|chromosome 10 open reading frame 2##NM_001163812|C10orf2|56652|chromosome 10 open reading frame 2##NM_001163813|C10orf2|56652|chromosome 10 open reading frame 2##NM_001163814|C10orf2|56652|chromosome 10 open reading frame 2##NM_021830|C10orf2|56652|chromosome 10 open reading frame 2##AK297068|C10orf2|56652|chromosome 10 open reading frame 2##BX640829|C10orf2|56652|chromosome 10 open reading frame 2##AB058716|LZTS2|84445|leucine zipper, putative tumor suppressor 2##BC058938|LZTS2|84445|leucine zipper, putative tumor suppressor 2##AK024422|PDZD7|79955|PDZ domain containing 7	0.949786	CTCF.p2:-2:0.950
chr16	47052187	47052305	reg1015110.p1	8.383	+	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	-44651	-	CU677459 AF011793 AJ001309 TSC_hg19_v1_chr16_-_47007561	-44724	-	TSC_hg19_v1_chr16_-_47005340 Y13350	-46898	-	AY358718 BC108727 TSC_hg19_v1_chr16_-_47177852 BC098380	125600	-	TSC_hg19_v1_chr16_-_47177902 AK074937 NM_001201477 NM_018092	125676	-	TSC_hg19_v1_chr16_-_47494975 BC006321 DQ893514 DQ896493 AF503339 AK027596	442619	-	AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AJ001309|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AY358718|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC108727|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC098380|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##AK074937|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_001201477|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_018092|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC006321|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ893514|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ896493|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF503339|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK027596|ITFG1|81533|integrin alpha FG-GAP repeat containing 1	0.0	
chr2	232791023	232791141	reg1002938.p3	8.383	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	-49	-	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-139966	+	TSC_hg19_v1_chr2_+_232646442 AK307486	-144645	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	35278	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	452301	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	480494	+	BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK307486|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2	0.434065	CTCF.p2:-53:0.434
chr10	52420021	52420161	reg1018732.p1	8.382	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	-36388	-	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-411751	-	NM_018232	-582206	+	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	79619	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	225302	-	TSC_hg19_v1_chr10_-_52645440 BC054873 AK000324 NM_001198818 NM_001198819 NM_001198820 NM_014576 NM_138932 NM_138933	225344	-	AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor##BC054873|A1CF|29974|APOBEC1 complementation factor##AK000324|A1CF|29974|APOBEC1 complementation factor##NM_001198818|A1CF|29974|APOBEC1 complementation factor##NM_001198819|A1CF|29974|APOBEC1 complementation factor##NM_001198820|A1CF|29974|APOBEC1 complementation factor##NM_014576|A1CF|29974|APOBEC1 complementation factor##NM_138932|A1CF|29974|APOBEC1 complementation factor##NM_138933|A1CF|29974|APOBEC1 complementation factor	0.985344	CTCF.p2:4:0.985
chr17	16654661	16654797	reg1015852.p1	8.381	+	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-61125	+	AK131401 NM_020787	-97568	-	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-182233	-	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	220675	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	291235	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	454884	-	EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6	0.209097	CTCF.p2:-4:0.209
chr20	37678836	37678967	reg1015370.p2	8.381	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-87912	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-123833	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-123912	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1638976	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1978593	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1978763	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.638184	CTCF.p2:-11:0.638
chr3	64385009	64385118	reg1013674.p2	8.381	+	BC119002 AL833539 NM_198859	-173943	-	AF530062 AB463196 TSC_hg19_v1_chr3_-_64009149 BC000630 AK095059 AY568086 D14663 NM_014814 BC012369 BC000904 AK290205 BX647742 AF215935	-375913	-	NM_001128149 AK310745 AK304062	-431606	+	AK057923 TSC_hg19_v1_chr3_+_64670789 BC040632	285728	+	AB037733 TSC_hg19_v1_chr3_-_64672299	287232	-	TSC_hg19_v1_chr3_-_64673334 AF261918 BC130578 BC171764 AF488803 NM_182920	288284	-	BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)##NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_001128149|ATXN7|6314|ataxin 7##AK310745|ATXN7|6314|ataxin 7##AK304062|ATXN7|6314|ataxin 7##AK057923|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##BC040632|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	0.982887	CTCF.p2:-2:0.951
chr6	3002217	3002348	reg1014669.p2	8.381	+	TSC_hg19_v1_chr6_+_3000111 NM_000904 AK311746 AK056981 J02888	-2154	+	AK094983 NM_001195291 NM_004568	-29884	-	TSC_hg19_v1_chr6_-_2971981 AK314578	-30233	-	AK314176 TSC_hg19_v1_chr6_+_3064200 AB208926	61884	+	BC126254 BC126256 HQ258488 NM_003804 U50062 AK304701	74782	+	TSC_hg19_v1_chr6_+_3118961 AK297518 NM_004332 AK314909 AL832502 AJ617684 X81372	116669	+	NM_000904|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK311746|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK056981|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##J02888|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK094983|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_001195291|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_004568|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314578|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314176|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AB208926|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK297518|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##NM_004332|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AK314909|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AL832502|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AJ617684|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##X81372|BPHL|670|biphenyl hydrolase-like (serine hydrolase)	0.037734	
chr11	44059035	44059179	reg1016457.p1	8.380	+	TSC_hg19_v1_chr11_+_43964186 NM_001145033 BC052560	-95098	+	TSC_hg19_v1_chr11_+_43902380 NM_139178 AK315266 AB042029 BC067257	-156714	+	NM_016142 TSC_hg19_v1_chr11_+_43702287 AK027882 AK075011 AK292625 AK075216 AK074952 AF078850 BC012043 AK222881 AK301663 BC012536 EU176708	-356849	+	AB231734 NM_001031854 BC144554	10440	+	NM_001127219 NM_032592 AK057649 BC020197 AY026508 AK304074 TSC_hg19_v1_chr11_+_44088043 AK307380	28799	+	NM_001178083 NM_207122 U62740 TSC_hg19_v1_chr11_+_44117224 AK312375 BC010058 AK296713	58067	+	NM_001145033|C11orf96|387763|chromosome 11 open reading frame 96##BC052560|C11orf96|387763|chromosome 11 open reading frame 96##NM_139178|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AK315266|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AB042029|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##BC067257|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##NM_016142|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK027882|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075011|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK292625|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075216|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK074952|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AF078850|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012043|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK222881|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK301663|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012536|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##EU176708|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##NM_001127219|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##NM_032592|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK057649|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##BC020197|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AY026508|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK304074|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK307380|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##NM_001178083|EXT2|2132|exostosin 2##NM_207122|EXT2|2132|exostosin 2##U62740|EXT2|2132|exostosin 2##AK312375|EXT2|2132|exostosin 2##BC010058|EXT2|2132|exostosin 2##AK296713|EXT2|2132|exostosin 2	0.165274	
chr4	91340393	91340532	reg1016672.p1	8.379	+	BC051694 NM_207491	-184281	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-291744	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-524400	+	AB209318 NM_001510 AK308611	1885130	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	3409599	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	3788349	+	BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.695414	CTCF.p2:-15:0.695
chr7	51437638	51437766	reg1018387.p1	8.379	+	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	-53216	-	AB385366 TSC_hg19_v1_chr7_-_51384416 BC136441 BC144099	-53322	-	TSC_hg19_v1_chr7_-_50861150 NM_001001555	-576548	-	NM_182595	1665646	+	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	3172380	+	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	3389177	-	BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##BC136441|COBL|23242|cordon-bleu homolog (mouse)##BC144099|COBL|23242|cordon-bleu homolog (mouse)##NM_001001555|GRB10|2887|growth factor receptor-bound protein 10##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12##NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit	0.917033	CTCF.p2:-11:0.917
chr17	25972757	25972873	reg1015042.p1	8.378	+	TSC_hg19_v1_chr17_+_25958264 AB003517 AB008492	-14543	+	TSC_hg19_v1_chr17_+_25958246 BC105942 BC105944	-14567	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	-14587	+	U31511 TSC_hg19_v1_chr17_-_26127402	154583	-	BC130283 BC144126 U05810 L09210 X73029 AF068236 AK304252 NM_000625 TSC_hg19_v1_chr17_-_26127556	154700	-	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	247576	-	AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC105942|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC105944|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9##U31511|NOS2|4843|nitric oxide synthase 2, inducible##BC130283|NOS2|4843|nitric oxide synthase 2, inducible##BC144126|NOS2|4843|nitric oxide synthase 2, inducible##U05810|NOS2|4843|nitric oxide synthase 2, inducible##L09210|NOS2|4843|nitric oxide synthase 2, inducible##X73029|NOS2|4843|nitric oxide synthase 2, inducible##AF068236|NOS2|4843|nitric oxide synthase 2, inducible##AK304252|NOS2|4843|nitric oxide synthase 2, inducible##NM_000625|NOS2|4843|nitric oxide synthase 2, inducible##AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108	1.525165	CTCF.p2:10:0.999	CTCF.p2:-17:0.526
chr18	53010817	53010953	reg1017345.p1	8.378	+	M74718 FR748220 FR748221 AK300038 NM_001243234 NM_001243235	-21883	-	FR748222 NM_001243236	-41103	-	AF273051 TSC_hg19_v1_chr18_-_52626693 BC029508 NM_025214	-384198	-	FR748209 M74720 AB209741 TSC_hg19_v1_chr18_-_53068920 AK300636	57953	-	FR748208 TSC_hg19_v1_chr18_-_53068947	58059	-	AK095041 NM_001243232	60340	-	M74718|TCF4|6925|transcription factor 4##FR748220|TCF4|6925|transcription factor 4##FR748221|TCF4|6925|transcription factor 4##AK300038|TCF4|6925|transcription factor 4##NM_001243234|TCF4|6925|transcription factor 4##NM_001243235|TCF4|6925|transcription factor 4##FR748222|TCF4|6925|transcription factor 4##NM_001243236|TCF4|6925|transcription factor 4##AF273051|CCDC68|80323|coiled-coil domain containing 68##BC029508|CCDC68|80323|coiled-coil domain containing 68##NM_025214|CCDC68|80323|coiled-coil domain containing 68##FR748209|TCF4|6925|transcription factor 4##AB209741|TCF4|6925|transcription factor 4##AK300636|TCF4|6925|transcription factor 4##AK095041|TCF4|6925|transcription factor 4##NM_001243232|TCF4|6925|transcription factor 4	0.0	
chr20	55570764	55570887	reg1017850.p1	8.377	+	TSC_hg19_v1_chr20_+_55204361 BC051829 NM_003222 AK314272 BC035664 U85658 X95693	-366395	+	BC014951 NM_001013646	-462542	+	AK131203 NM_080615	-469845	-	EU679366 AK094784 CU678997 DQ891494 DQ894685 EU176612 AB528364 CU678634 BC008584 M60316 AK312419 AK291186 TSC_hg19_v1_chr20_-_55841286 X51801	270370	-	TSC_hg19_v1_chr20_-_55841684 BC004248 NM_001719	270863	-	AF169385 NM_012444 NM_198265 BC033591 AF149310	334027	+	BC051829|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##NM_003222|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##AK314272|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##BC035664|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##U85658|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##X95693|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##BC014951|FAM209B|388799|family with sequence similarity 209, member B##NM_001013646|FAM209B|388799|family with sequence similarity 209, member B##AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##EU679366|BMP7|655|bone morphogenetic protein 7##AK094784|BMP7|655|bone morphogenetic protein 7##DQ891494|BMP7|655|bone morphogenetic protein 7##DQ894685|BMP7|655|bone morphogenetic protein 7##EU176612|BMP7|655|bone morphogenetic protein 7##BC008584|BMP7|655|bone morphogenetic protein 7##M60316|BMP7|655|bone morphogenetic protein 7##AK312419|BMP7|655|bone morphogenetic protein 7##AK291186|BMP7|655|bone morphogenetic protein 7##X51801|BMP7|655|bone morphogenetic protein 7##BC004248|BMP7|655|bone morphogenetic protein 7##NM_001719|BMP7|655|bone morphogenetic protein 7##AF169385|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_012444|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_198265|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##BC033591|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##AF149310|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	1.020625	CTCF.p2:8:0.988
chr8	13519832	13519948	reg1017280.p1	8.377	+	AK058131 NM_001007090 BC031245 AF394908 CU689130	-95465	+	BC054511 AK291682 AK024773 AK225098 AB051510 BC049842 NM_024767 NM_182643	-147585	-	TSC_hg19_v1_chr8_-_13134056 AK025544	-385845	-	NM_139167	1575901	-	NM_006765 NM_178234 BC010370 TSC_hg19_v1_chr8_+_15397731	1877773	+	TSC_hg19_v1_chr8_+_15397771 U42349 BT020002 DQ892936 DQ896185	1877960	+	AK058131|C8orf48|157773|chromosome 8 open reading frame 48##NM_001007090|C8orf48|157773|chromosome 8 open reading frame 48##BC031245|C8orf48|157773|chromosome 8 open reading frame 48##AF394908|C8orf48|157773|chromosome 8 open reading frame 48##BC054511|DLC1|10395|deleted in liver cancer 1##AK291682|DLC1|10395|deleted in liver cancer 1##AK024773|DLC1|10395|deleted in liver cancer 1##AK225098|DLC1|10395|deleted in liver cancer 1##AB051510|DLC1|10395|deleted in liver cancer 1##BC049842|DLC1|10395|deleted in liver cancer 1##NM_024767|DLC1|10395|deleted in liver cancer 1##NM_182643|DLC1|10395|deleted in liver cancer 1##AK025544|DLC1|10395|deleted in liver cancer 1##NM_139167|SGCZ|137868|sarcoglycan, zeta##NM_006765|TUSC3|7991|tumor suppressor candidate 3##NM_178234|TUSC3|7991|tumor suppressor candidate 3##BC010370|TUSC3|7991|tumor suppressor candidate 3##U42349|TUSC3|7991|tumor suppressor candidate 3##BT020002|TUSC3|7991|tumor suppressor candidate 3##DQ892936|TUSC3|7991|tumor suppressor candidate 3##DQ896185|TUSC3|7991|tumor suppressor candidate 3	0.997117	CTCF.p2:5:0.997
chr10	63352460	63352593	reg1016462.p1	8.375	+	CR749606 NM_178505	-139319	-	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	-139567	-	AK075129 BC093035 TSC_hg19_v1_chr10_-_62761269	-591286	-	BC041932 NM_173554	70192	+	NM_032199	308486	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	308905	+	CR749606|TMEM26|219623|transmembrane protein 26##NM_178505|TMEM26|219623|transmembrane protein 26##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26##AK075129|RHOBTB1|9886|Rho-related BTB domain containing 1##BC093035|RHOBTB1|9886|Rho-related BTB domain containing 1##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	0.36735	CTCF.p2:9:0.258
chr7	28118044	28118148	reg1014792.p1	8.375	+	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-338277	+	BC001764 TSC_hg19_v1_chr7_+_27779809	-338287	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	-338321	+	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	102105	-	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	102310	-	L05913 NM_182899	220843	+	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5	0.974955	CTCF.p2:-2:0.975
chr10	119202521	119202673	reg1018294.p1	8.374	+	CU688476 TSC_hg19_v1_chr10_-_119134939 BC012186 BC028375 NM_173791 AK091746 AX747159 BC033019	-67716	-	NM_003054 BC030593 TSC_hg19_v1_chr10_+_119000626 AK314997 L23205 L09118 X71354 L14269 BC108927 BC108928	-201947	+	AB087138 AB464053 NM_181840	-245598	+	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	99319	-	AF301598 NM_001165924 NM_004098	99358	+	TSC_hg19_v1_chr10_+_119302713 AB463605	100146	+	BC012186|PDZD8|118987|PDZ domain containing 8##BC028375|PDZD8|118987|PDZ domain containing 8##NM_173791|PDZD8|118987|PDZ domain containing 8##AK091746|PDZD8|118987|PDZ domain containing 8##BC033019|PDZD8|118987|PDZ domain containing 8##NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AB087138|KCNK18|338567|potassium channel, subfamily K, member 18##NM_181840|KCNK18|338567|potassium channel, subfamily K, member 18##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AF301598|EMX2|2018|empty spiracles homeobox 2##NM_001165924|EMX2|2018|empty spiracles homeobox 2##NM_004098|EMX2|2018|empty spiracles homeobox 2	0.999956	CTCF.p2:-11:1.000
chr7	128101556	128101683	reg1014911.p1	8.374	+	TSC_hg19_v1_chr7_+_128095931 NM_001098786 NM_013332 AF144755 AK024729 AK222583 BC008573 BC001863 BC093742 BC112183	-5653	+	TSC_hg19_v1_chr7_-_128050037 AK092452 BC033622 AK054667 AK122994 NM_000883 NM_001102605 NM_001142576 NM_183243	-51582	-	AK131294 TSC_hg19_v1_chr7_-_128049984 CR933672	-51639	-	NM_018396 TSC_hg19_v1_chr7_+_128116813 AK302775 BC107586 AK002212 BC064929 BC121115 BC121116 AK299960	15218	+	BC066973 NM_001012454 NM_001128926 BC105729 BC105730 BC105731 BC047310	210727	+	TSC_hg19_v1_chr7_+_128349114 AK093161 AK302221 AX747964 BC040906 AK310426	247508	+	NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated##AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK092452|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC033622|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054667|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK122994|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_000883|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001102605|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142576|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_183243|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK131294|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##CR933672|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_018396|METTL2B|55798|methyltransferase like 2B##AK302775|METTL2B|55798|methyltransferase like 2B##BC107586|METTL2B|55798|methyltransferase like 2B##AK002212|METTL2B|55798|methyltransferase like 2B##BC064929|METTL2B|55798|methyltransferase like 2B##BC121115|METTL2B|55798|methyltransferase like 2B##BC121116|METTL2B|55798|methyltransferase like 2B##AK299960|METTL2B|55798|methyltransferase like 2B##BC066973|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001012454|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001128926|FAM71F2|346653|family with sequence similarity 71, member F2##BC105729|FAM71F2|346653|family with sequence similarity 71, member F2##BC105730|FAM71F2|346653|family with sequence similarity 71, member F2##BC105731|FAM71F2|346653|family with sequence similarity 71, member F2##BC047310|FAM71F2|346653|family with sequence similarity 71, member F2##AK093161|FAM71F1|84691|family with sequence similarity 71, member F1##AK302221|FAM71F1|84691|family with sequence similarity 71, member F1##BC040906|FAM71F1|84691|family with sequence similarity 71, member F1##AK310426|FAM71F1|84691|family with sequence similarity 71, member F1	0.998985	CTCF.p2:-4:0.999
chr7	149496995	149497152	reg1017563.p1	8.374	+	NM_198455	-23943	+	BC052625 NM_207336 BC038972	-26773	-	TSC_hg19_v1_chr7_+_149412043 BC142722 BC146667 AB058765 BC150330 BC152409 NM_032534	-84986	+	BC092506 TSC_hg19_v1_chr7_+_149535500 AK054924	38417	+	BC045757 NM_001099220 TSC_hg19_v1_chr7_+_149535531	38448	+	TSC_hg19_v1_chr7_+_149570049 AF452639 AK057700 NM_001100592 NM_145230	72969	+	NM_198455|SSPO|23145|SCO-spondin homolog (Bos taurus)##BC052625|ZNF467|168544|zinc finger protein 467##NM_207336|ZNF467|168544|zinc finger protein 467##BC038972|ZNF467|168544|zinc finger protein 467##BC142722|KRBA1|84626|KRAB-A domain containing 1##BC146667|KRBA1|84626|KRAB-A domain containing 1##AB058765|KRBA1|84626|KRAB-A domain containing 1##BC150330|KRBA1|84626|KRAB-A domain containing 1##BC152409|KRBA1|84626|KRAB-A domain containing 1##NM_032534|KRBA1|84626|KRAB-A domain containing 1##BC092506|ZNF862|643641|zinc finger protein 862##AK054924|ZNF862|643641|zinc finger protein 862##BC045757|ZNF862|643641|zinc finger protein 862##NM_001099220|ZNF862|643641|zinc finger protein 862##AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	0.98024	CTCF.p2:14:0.980
chr12	29581069	29581172	reg1016408.p1	8.373	+	TSC_hg19_v1_chr12_-_29534109 AF183410 AF216751 AF302767 BC000887 BC107794 NM_016570	-47005	-	AK222799 TSC_hg19_v1_chr12_-_29534084 AL834128	-47037	-	TSC_hg19_v1_chr12_-_29534081 BC064522	-47045	-	NM_183378	69498	-	TSC_hg19_v1_chr12_-_29936844 GQ865601 NM_001193451	355650	-	BC042083 NM_175861	356571	-	AF183410|ERGIC2|51290|ERGIC and golgi 2##AF216751|ERGIC2|51290|ERGIC and golgi 2##AF302767|ERGIC2|51290|ERGIC and golgi 2##BC000887|ERGIC2|51290|ERGIC and golgi 2##BC107794|ERGIC2|51290|ERGIC and golgi 2##NM_016570|ERGIC2|51290|ERGIC and golgi 2##AK222799|ERGIC2|51290|ERGIC and golgi 2##AL834128|ERGIC2|51290|ERGIC and golgi 2##BC064522|ERGIC2|51290|ERGIC and golgi 2##NM_183378|OVCH1|341350|ovochymase 1##GQ865601|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_001193451|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##BC042083|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_175861|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1	0.038954	
chr17_ctg5_hap1	1666995	1667116	reg1018516.p1	8.373	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.98076	CTCF.p2:16:0.981
chr8	47368557	47368662	reg1016036.p1	8.373	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	-4221004	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-4372962	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-4372976	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	804886	+	TSC_hg19_v1_chr8_+_48173521 AK303579	804910	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	804923	+	AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146	0.0	
chr13	78891295	78891416	reg1014756.p1	8.372	+	D90402 NM_000115 S57283 AF308156	-341639	-	AF114165 NM_001201397	-397453	-	AF114163 AF114164 TSC_hg19_v1_chr13_-_78493569	-397804	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	278927	+	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	286368	-	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	341938	-	D90402|EDNRB|1910|endothelin receptor type B##NM_000115|EDNRB|1910|endothelin receptor type B##S57283|EDNRB|1910|endothelin receptor type B##AF114165|EDNRB|1910|endothelin receptor type B##NM_001201397|EDNRB|1910|endothelin receptor type B##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219	0.0	
chr7	81646756	81646905	reg1017859.p1	8.372	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-247456	-	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-1098156	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-1098396	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	426016	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	426250	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	1145039	-	FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)	0.788332	CTCF.p2:21:0.788
chr11	119155417	119155554	reg1016495.p2	8.371	+	TSC_hg19_v1_chr11_+_119077024 BC132733 BC136463	-78445	+	TSC_hg19_v1_chr11_+_119076992 X57110 NM_005188	-78502	+	TSC_hg19_v1_chr11_-_119076895 BC043548	-78587	-	AB527309 EU832794 GQ129330 TSC_hg19_v1_chr11_-_119187841 BC006329 M28882 M29277 AF089868 BC056418 AK128335 AK291571 AK312430 NM_006500 AB209925	32356	-	TSC_hg19_v1_chr11_+_119205234 BX648447 AK122642 BX647424 NM_032015	49746	+	AL110261 AB590791 TSC_hg19_v1_chr11_-_119211170	55617	-	BC132733|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##BC136463|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##X57110|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##NM_005188|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##BC043548|CCDC153|283152|coiled-coil domain containing 153##EU832794|MCAM|4162|melanoma cell adhesion molecule##GQ129330|MCAM|4162|melanoma cell adhesion molecule##M28882|MCAM|4162|melanoma cell adhesion molecule##M29277|MCAM|4162|melanoma cell adhesion molecule##AF089868|MCAM|4162|melanoma cell adhesion molecule##BC056418|MCAM|4162|melanoma cell adhesion molecule##AK128335|MCAM|4162|melanoma cell adhesion molecule##AK291571|MCAM|4162|melanoma cell adhesion molecule##AK312430|MCAM|4162|melanoma cell adhesion molecule##NM_006500|MCAM|4162|melanoma cell adhesion molecule##AB209925|MCAM|4162|melanoma cell adhesion molecule##BX648447|RNF26|79102|ring finger protein 26##AK122642|RNF26|79102|ring finger protein 26##BX647424|RNF26|79102|ring finger protein 26##NM_032015|RNF26|79102|ring finger protein 26##AL110261|MFRP|83552|membrane frizzled-related protein	0.782836	CTCF.p2:-6:0.783
chr1	25364349	25364450	reg1014199.p2	8.371	+	BC013362 AK310945 NM_001031680 AF022726	-72857	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-107613	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-107660	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	194588	-	BC065040 TSC_hg19_v1_chr1_-_25573922	209524	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	209574	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.991967	CTCF.p2:-32:0.992
chr14	94121553	94121660	reg1014297.p1	8.371	+	AY161004 NM_182971 BC101125 BC101126	-308058	+	AK125327 NM_020818	-322042	+	TSC_hg19_v1_chr14_-_93799376 AK291422 BC141850 BX248762 NM_001002860 NM_018167 BC047071	-322202	-	AY225516 AY225517 NM_178013	133159	-	NM_001207071 NM_138344 AK093387 AX748092	263642	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	272102	+	AY161004|COX8C|341947|cytochrome c oxidase subunit VIIIC##NM_182971|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101125|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101126|COX8C|341947|cytochrome c oxidase subunit VIIIC##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)##AK291422|BTBD7|55727|BTB (POZ) domain containing 7##BC141850|BTBD7|55727|BTB (POZ) domain containing 7##BX248762|BTBD7|55727|BTB (POZ) domain containing 7##NM_001002860|BTBD7|55727|BTB (POZ) domain containing 7##NM_018167|BTBD7|55727|BTB (POZ) domain containing 7##BC047071|BTBD7|55727|BTB (POZ) domain containing 7##AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A	0.99812	CTCF.p2:3:0.998
chr19	10527682	10527788	reg1009342.p2	8.371	+	AY593872 NM_001243121 TSC_hg19_v1_chr19_+_10527555	-232	+	TSC_hg19_v1_chr19_-_10514250 NM_007065	-13479	-	TSC_hg19_v1_chr19_-_10514219 BC000083 BC008793 U63131	-13522	-	TSC_hg19_v1_chr19_+_10531189 L20965 NM_001111307	3495	+	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	13692	+	AF073745 NM_001111309	15375	+	AY593872|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001243121|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_007065|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC000083|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC008793|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U63131|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##L20965|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111307|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AF073745|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111309|PDE4A|5141|phosphodiesterase 4A, cAMP-specific	0.997899	CTCF.p2:-4:0.998
chr7	104284195	104284311	reg1018279.p1	8.371	+	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-315035	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-435822	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-654257	-	TSC_hg19_v1_chr7_-_104567089 BC050337	282837	-	TSC_hg19_v1_chr7_-_104653491 AK124046	369229	-	TSC_hg19_v1_chr7_-_104654062 AK094372	369821	-	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##BC050337|LOC723809|723809|uncharacterized LOC723809##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545	0.893748	CTCF.p2:-15:0.894
chr10	76003979	76004108	reg1016718.p1	8.370	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-67456	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-67513	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-67561	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	582311	+	AY686755 NM_001003892 BC137321 BC137322	814262	-	AB027004 AB103375 NM_016364	855204	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.995934	CTCF.p2:-9:0.996
chr2	148959046	148959191	reg1015996.p1	8.370	+	NM_181742	-179946	-	TSC_hg19_v1_chr2_+_148778636 NM_018328 EF542797	-180509	+	TSC_hg19_v1_chr2_-_148778310 AK225092 BC005388 AF022108 AF047598 AF132596 BC014847 AK295721 AK291989 AK294878 AK298862 NM_001190882 NM_001190879 AK299749 NM_002552 NM_001190881 NM_181741	-180756	-	TSC_hg19_v1_chr2_+_149402332 AK125789	443218	+	NM_015630 AF286904 BC093818 BC093820	443485	+	TSC_hg19_v1_chr2_+_149632795 NM_004522 BC002721 BC025961 AB011103	673678	+	NM_181742|ORC4|5000|origin recognition complex, subunit 4##NM_018328|MBD5|55777|methyl-CpG binding domain protein 5##EF542797|MBD5|55777|methyl-CpG binding domain protein 5##AK225092|ORC4|5000|origin recognition complex, subunit 4##BC005388|ORC4|5000|origin recognition complex, subunit 4##AF022108|ORC4|5000|origin recognition complex, subunit 4##AF047598|ORC4|5000|origin recognition complex, subunit 4##AF132596|ORC4|5000|origin recognition complex, subunit 4##BC014847|ORC4|5000|origin recognition complex, subunit 4##AK295721|ORC4|5000|origin recognition complex, subunit 4##AK291989|ORC4|5000|origin recognition complex, subunit 4##AK294878|ORC4|5000|origin recognition complex, subunit 4##AK298862|ORC4|5000|origin recognition complex, subunit 4##NM_001190882|ORC4|5000|origin recognition complex, subunit 4##NM_001190879|ORC4|5000|origin recognition complex, subunit 4##AK299749|ORC4|5000|origin recognition complex, subunit 4##NM_002552|ORC4|5000|origin recognition complex, subunit 4##NM_001190881|ORC4|5000|origin recognition complex, subunit 4##NM_181741|ORC4|5000|origin recognition complex, subunit 4##AK125789|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##NM_015630|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##AF286904|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##BC093818|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##BC093820|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##NM_004522|KIF5C|3800|kinesin family member 5C##BC002721|KIF5C|3800|kinesin family member 5C##BC025961|KIF5C|3800|kinesin family member 5C##AB011103|KIF5C|3800|kinesin family member 5C	0.99969	CTCF.p2:16:1.000
chr5	7897245	7897358	reg1015884.p1	8.370	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-27991	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-28042	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-28169	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	1648893	-	BC095521 NM_019599	1733161	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	2352683	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.996934	CTCF.p2:11:0.997
chr1	203242548	203242674	reg1000558.p2	8.369	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-43796	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-86685	-	BC008568 TSC_hg19_v1_chr1_-_203155877 AK312911	-86723	-	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	32078	+	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	74773	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	77598	-	U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.0	
chr15	76478118	76478243	reg1018071.p1	8.369	+	TSC_hg19_v1_chr15_+_76352323 AK056777 AK308676	-125851	+	TSC_hg19_v1_chr15_+_76352281 AK095509 NM_152335	-125891	+	AK311204 TSC_hg19_v1_chr15_-_76352131	-126078	-	BT009796 J04058 TSC_hg19_v1_chr15_-_76603737 AB529049 BC095457	125552	-	TSC_hg19_v1_chr15_-_76603771 AK300044 BC015526 D28380	125585	-	TSC_hg19_v1_chr15_-_76603791 BC029995	125617	-	AK308676|C15orf27|123591|chromosome 15 open reading frame 27##AK095509|C15orf27|123591|chromosome 15 open reading frame 27##NM_152335|C15orf27|123591|chromosome 15 open reading frame 27##AK311204|NRG4|145957|neuregulin 4##BT009796|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##J04058|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC095457|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##AK300044|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC015526|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC029995|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide	0.023356	
chr16	68554634	68554751	reg1016640.p1	8.369	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	-72211	-	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	-209733	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	-209866	-	TSC_hg19_v1_chr16_+_68564035 BC040871	9341	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	18506	+	NM_133458	18968	+	AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)##NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)	0.278652	CTCF.p2:3:0.279
chr5	170769497	170769615	reg1015725.p1	8.369	+	BC017291 NM_021025 DQ892654 DQ895893 DQ896085	-33228	+	TSC_hg19_v1_chr5_+_170289029 AJ271459 AJ288952 AJ288953 AJ288954 AJ288955 BC030953 AF222747 AB527205 AL832980	-480534	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	-480625	+	NM_001037738 NM_002520 NM_199185 TSC_hg19_v1_chr5_+_170814855 D28343 AK290652 BC008495 BC107754 BC012566 BC021668 DQ303464 BC016716 BC016768 BC016824 BC021983 BC014349 BC002398 M23613 M26697 BC020467 BC050628 M28699 AY740634 AY740635 AY740636 AY740637 AY740638 AY740639 AY740640 BC063542	45241	+	AB042278 AB451236 AB451361 AB463949 BT007011 CU676967 CU677717 CU680364 CU692436 DQ892032 DQ895223 EF429251 X16934 TSC_hg19_v1_chr5_+_170815031	45435	+	AY358811 AF075292 NM_003862	77106	+	BC017291|TLX3|30012|T-cell leukemia homeobox 3##NM_021025|TLX3|30012|T-cell leukemia homeobox 3##DQ892654|TLX3|30012|T-cell leukemia homeobox 3##DQ895893|TLX3|30012|T-cell leukemia homeobox 3##DQ896085|TLX3|30012|T-cell leukemia homeobox 3##AJ271459|RANBP17|64901|RAN binding protein 17##AJ288952|RANBP17|64901|RAN binding protein 17##AJ288953|RANBP17|64901|RAN binding protein 17##AJ288954|RANBP17|64901|RAN binding protein 17##AJ288955|RANBP17|64901|RAN binding protein 17##BC030953|RANBP17|64901|RAN binding protein 17##AF222747|RANBP17|64901|RAN binding protein 17##AL832980|RANBP17|64901|RAN binding protein 17##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17##NM_001037738|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##NM_002520|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##NM_199185|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##D28343|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AK290652|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC008495|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC107754|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC012566|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC021668|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ303464|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016716|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016768|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016824|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC021983|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC014349|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC002398|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M23613|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M26697|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC020467|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC050628|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M28699|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740634|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740635|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740636|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740637|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740638|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740639|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740640|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB042278|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451236|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451361|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BT007011|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ892032|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ895223|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##EF429251|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##X16934|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY358811|FGF18|8817|fibroblast growth factor 18##AF075292|FGF18|8817|fibroblast growth factor 18##NM_003862|FGF18|8817|fibroblast growth factor 18	0.94653	CTCF.p2:3:0.947
chr6_qbl_hap6	3900479	3900613	reg1016676.p1	8.369	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.575388	CTCF.p2:26:0.575
chr8	58403991	58404108	reg1016438.p2	8.369	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-497623	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-497647	-	TSC_hg19_v1_chr8_-_57906381 BC017797	-497671	-	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	503108	+	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	919836	+	X56088 M93133 BC101777 BC112184 NM_000780	1008658	-	AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	0.225303	CTCF.p2:19:0.225
chr9	38263679	38263812	reg1018258.p1	8.369	+	X75342 NM_003028 TSC_hg19_v1_chr9_-_38069225 BC094765	-194504	-	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	-194604	-	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	-359379	-	TSC_hg19_v1_chr9_+_38392669 NM_000692	128928	+	TSC_hg19_v1_chr9_+_38392698 AK313344	128952	+	TSC_hg19_v1_chr9_+_38392760 AK297020 BC001619 AK225950	128997	+	X75342|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_003028|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B##AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK313344|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK297020|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##BC001619|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK225950|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1	0.0	
chr9	79611751	79611876	reg1016081.p1	8.369	+	AB535152 FJ808772 FJ808773 BC019095 NM_015225 TSC_hg19_v1_chr9_-_79521026	-90861	-	AY196297 NM_001097636	-496265	+	AY196296 NM_001097635	-518557	+	NM_001013735	22757	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	180526	+	TSC_hg19_v1_chr9_+_79792474 AB054005	180695	+	AB535152|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808772|PRUNE2|158471|prune homolog 2 (Drosophila)##FJ808773|PRUNE2|158471|prune homolog 2 (Drosophila)##BC019095|PRUNE2|158471|prune homolog 2 (Drosophila)##NM_015225|PRUNE2|158471|prune homolog 2 (Drosophila)##AY196297|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097636|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001013735|FOXB2|442425|forkhead box B2##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)	0.966472	CTCF.p2:11:0.966
chr9	806675	806811	reg1018595.p1	8.369	+	TSC_hg19_v1_chr9_+_706828 BC038116 NM_153186	-99913	+	AB205112 TSC_hg19_v1_chr9_+_686677	-120077	+	AK311119 AB205111 TSC_hg19_v1_chr9_+_684289	-122499	+	AF130728 AY442914 AY442915 NM_021951 AK313594 AJ276801 AL162131 BC040847 EU446468 AB463577 CU691924	35020	+	NM_021240 BC113584 BC117245	170222	+	AF193873 TSC_hg19_v1_chr9_+_977425	170662	+	BC038116|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_153186|KANK1|23189|KN motif and ankyrin repeat domains 1##AF130728|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442914|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442915|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021951|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AK313594|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AJ276801|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AL162131|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BC040847|DMRT1|1761|doublesex and mab-3 related transcription factor 1##EU446468|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021240|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC113584|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC117245|DMRT3|58524|doublesex and mab-3 related transcription factor 3##AF193873|DMRT3|58524|doublesex and mab-3 related transcription factor 3	0.695153	CTCF.p2:7:0.695
chr19	34587345	34587464	reg1017765.p1	8.368	+	TSC_hg19_v1_chr19_+_34287743 NM_001129994 NM_001129995 NM_024076 AK027901 AK291465 BC001185 BC009335 AK225793 AK294543	-299668	+	BC018723 NM_022467	-411971	+	TSC_hg19_v1_chr19_+_34112858 NM_001127895 NM_001127896 BC014250 BC011380 AB047801	-474469	+	TSC_hg19_v1_chr19_+_34663327 BC016842 NM_001114093 NM_015578	75927	+	TSC_hg19_v1_chr19_+_34663429 AK300208	76022	+	TSC_hg19_v1_chr19_+_34663440 AL834398 AK027643 AB069974 AB069975	76064	+	NM_001129994|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_001129995|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_024076|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK027901|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK291465|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC001185|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC009335|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK225793|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK294543|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127895|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127896|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC014250|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC011380|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##AB047801|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC016842|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_001114093|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_015578|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK300208|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AL834398|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK027643|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069974|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069975|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)	0.997666	CTCF.p2:7:0.998
chr16	9030421	9030528	reg1015052.p2	8.367	+	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	-67614	-	NM_001042476 BC001333	-68222	-	NM_000303 TSC_hg19_v1_chr16_+_8891675 AK296123 U85773 AK300785 AK291537 AK299979 AK311035 AK312532 AK304320 AK296630 BC008310	-138776	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	26821	-	TSC_hg19_v1_chr16_+_9185545 NM_014117	155066	+	TSC_hg19_v1_chr16_+_9185577 BC113570	155129	+	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_000303|PMM2|5373|phosphomannomutase 2##U85773|PMM2|5373|phosphomannomutase 2##AK300785|PMM2|5373|phosphomannomutase 2##AK291537|PMM2|5373|phosphomannomutase 2##AK299979|PMM2|5373|phosphomannomutase 2##AK311035|PMM2|5373|phosphomannomutase 2##AK312532|PMM2|5373|phosphomannomutase 2##AK304320|PMM2|5373|phosphomannomutase 2##AK296630|PMM2|5373|phosphomannomutase 2##BC008310|PMM2|5373|phosphomannomutase 2##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##BC113570|C16orf72|29035|chromosome 16 open reading frame 72	0.725481	CTCF.p2:21:0.725
chr9	112915306	112915420	reg1012197.p1	8.367	+	NM_001136562 AK300427	-27571	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	-104400	+	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	-104454	+	NM_001012993	55049	-	AF065241 AF276919 CR407665 AF313911 AY004872 AF085844 BC003377 J04026 BC054866 TSC_hg19_v1_chr9_-_113018788 X77584	103389	-	TSC_hg19_v1_chr9_-_113018817 BX647247 D28376 AK289508	103462	-	NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001012993|C9orf152|401546|chromosome 9 open reading frame 152##AF065241|TXN|7295|thioredoxin##AF276919|TXN|7295|thioredoxin##CR407665|TXN|7295|thioredoxin##AF313911|TXN|7295|thioredoxin##AY004872|TXN|7295|thioredoxin##AF085844|TXN|7295|thioredoxin##BC003377|TXN|7295|thioredoxin##J04026|TXN|7295|thioredoxin##BC054866|TXN|7295|thioredoxin##X77584|TXN|7295|thioredoxin##BX647247|TXN|7295|thioredoxin##D28376|TXN|7295|thioredoxin##AK289508|TXN|7295|thioredoxin	0.91922	CTCF.p2:22:0.919
chr13	28528118	28528239	reg1015830.p2	8.366	+	TSC_hg19_v1_chr13_+_28494136 NM_000209 X99894 U30329 U35632 AB464648	-33974	+	AB044157 NM_145657 AB463700	-161377	+	AK000623 TSC_hg19_v1_chr13_+_28196032 AB464657 AB527907 CU677257	-332104	+	CU677005 AB463470 DQ893626 EU176674 U51096 TSC_hg19_v1_chr13_-_28543282	15034	-	TSC_hg19_v1_chr13_-_28543325 BC014461 NM_001265	15130	-	TSC_hg19_v1_chr13_-_28543453 Y13709	15285	-	NM_000209|PDX1|3651|pancreatic and duodenal homeobox 1##X99894|PDX1|3651|pancreatic and duodenal homeobox 1##U30329|PDX1|3651|pancreatic and duodenal homeobox 1##U35632|PDX1|3651|pancreatic and duodenal homeobox 1##AB044157|GSX1|219409|GS homeobox 1##NM_145657|GSX1|219409|GS homeobox 1##AK000623|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##DQ893626|CDX2|1045|caudal type homeobox 2##EU176674|CDX2|1045|caudal type homeobox 2##U51096|CDX2|1045|caudal type homeobox 2##BC014461|CDX2|1045|caudal type homeobox 2##NM_001265|CDX2|1045|caudal type homeobox 2##Y13709|CDX2|1045|caudal type homeobox 2	0.09365	
chr16	85461967	85462070	reg1015805.p2	8.366	+	BC093665 BC111944 AK126284 NM_198491	-315964	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-400648	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-416889	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	183003	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	184935	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	260524	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.997998	CTCF.p2:-7:0.998
chr17	65624987	65625097	reg1010545.p2	8.365	+	BC007905 NM_012417 NM_181671	-251119	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-251454	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-251633	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	89008	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	196660	+	AK293224 TSC_hg19_v1_chr17_+_65822221	197175	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.260302	CTCF.p2:10:0.260
chr2	90190799	90190909	reg1017065.p1	8.365	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-113100	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-571001	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-677621	-	TSC_hg19_v1_chr2_+_90211706 Z69013	20864	+	TSC_hg19_v1_chr2_-_91847997 BC030764	1657149	-	AK097438 BC021716 NM_144705 AK296678 CU692394	5346396	+	BC070334|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4	0.998223	CTCF.p2:-10:0.998
chr3	160404882	160405032	reg1014984.p1	8.365	+	AK026248 NM_025047 BC034354	-10002	+	TSC_hg19_v1_chr3_-_160283387 BC034493 NM_002268	-121569	-	TSC_hg19_v1_chr3_-_160283329 BC028691 AK291041	-121637	-	TSC_hg19_v1_chr3_+_160473386 BC110801	68383	+	AY337264 NM_139245	69038	+	AB050856 NM_033169 TSC_hg19_v1_chr3_-_160823138 AY359049 BC047618 AK223439 BC028571 AF154848 AK022491 AK095917 NM_001038628 NM_003781 NM_033167 NM_033168	417980	-	AK026248|ARL14|80117|ADP-ribosylation factor-like 14##NM_025047|ARL14|80117|ADP-ribosylation factor-like 14##BC034354|ARL14|80117|ADP-ribosylation factor-like 14##BC034493|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##NM_002268|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##BC110801|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	0.60588	CTCF.p2:-10:0.606
chr11	6833735	6833876	reg1018056.p1	8.363	+	BC101489 BC101491 NM_003696	-16730	-	BC151143 NM_001004489	-27558	+	NM_001004490 BC140734	-43569	-	BC093651 BC093653 AF324499 NM_178168	33092	+	BC136955 NM_001004460	57149	+	BC137024 BC137027 NM_207186 AF209506	64061	+	BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##BC151143|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##NM_001004489|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##NM_001004490|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC140734|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC093651|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5##BC093653|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5##AF324499|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5##NM_178168|OR10A5|144124|olfactory receptor, family 10, subfamily A, member 5##BC136955|OR10A2|341276|olfactory receptor, family 10, subfamily A, member 2##NM_001004460|OR10A2|341276|olfactory receptor, family 10, subfamily A, member 2##BC137024|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4##BC137027|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4##NM_207186|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4##AF209506|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4	0.981531	CTCF.p2:11:0.982
chr16	72133337	72133487	reg1016561.p1	8.363	+	NM_001142318	-5198	-	NM_001142317	-5645	-	NM_014003 TSC_hg19_v1_chr16_+_72127745 AK301074 AK291634 AK293776 AK297269 AK311169 D86977 AK309391 BC004235 BC008340 AK297791	-5650	+	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	72631	-	AK122925 NM_001160213	72936	-	TSC_hg19_v1_chr16_+_72699031 AK021563	565652	+	NM_001142318|TXNL4B|54957|thioredoxin-like 4B##NM_001142317|TXNL4B|54957|thioredoxin-like 4B##NM_014003|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK301074|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK291634|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK293776|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK297269|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK311169|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##D86977|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK309391|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##BC004235|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##BC008340|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK297791|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	1.087211	CTCF.p2:-17:0.975
chr17	15406238	15406361	reg1014958.p2	8.363	+	BC029542 NM_001204477	-35375	-	AF334676 AK223534 BC031688 AK314327 AK057390 NM_031898	-161372	-	BC091499 D11428 NM_000304 TSC_hg19_v1_chr17_-_15168644	-237681	-	TSC_hg19_v1_chr17_-_15466802 BC011952 AK303475 AB074181 AK310363 NM_001135036 NM_001204478 NM_145301	60559	-	AK057407 NM_006382	116718	-	BC001564 CR457136 EU446937 HQ257965 AK002035 AK314557 TSC_hg19_v1_chr17_-_15554961 AB209899	148588	-	BC029542|CDRT4|284040|CMT1A duplicated region transcript 4##NM_001204477|CDRT4|284040|CMT1A duplicated region transcript 4##AF334676|TEKT3|64518|tektin 3##AK223534|TEKT3|64518|tektin 3##BC031688|TEKT3|64518|tektin 3##AK314327|TEKT3|64518|tektin 3##AK057390|TEKT3|64518|tektin 3##NM_031898|TEKT3|64518|tektin 3##BC091499|PMP22|5376|peripheral myelin protein 22##D11428|PMP22|5376|peripheral myelin protein 22##NM_000304|PMP22|5376|peripheral myelin protein 22##BC011952|FAM18B2|201158|family with sequence similarity 18, member B2##AK303475|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 readthrough##AB074181|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 readthrough##AK310363|FAM18B2|201158|family with sequence similarity 18, member B2##NM_001135036|FAM18B2|201158|family with sequence similarity 18, member B2##NM_001204478|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 readthrough##NM_145301|FAM18B2|201158|family with sequence similarity 18, member B2##AK057407|CDRT1|374286|CMT1A duplicated region transcript 1##NM_006382|CDRT1|374286|CMT1A duplicated region transcript 1##BC001564|TRIM16|10626|tripartite motif containing 16##CR457136|TRIM16|10626|tripartite motif containing 16##EU446937|TRIM16|10626|tripartite motif containing 16##HQ257965|TRIM16|10626|tripartite motif containing 16##AK002035|TRIM16|10626|tripartite motif containing 16##AK314557|TRIM16|10626|tripartite motif containing 16	0.974033	CTCF.p2:5:0.974
chr5	148200513	148200642	reg1017176.p1	8.363	+	AK308471 TSC_hg19_v1_chr5_-_148034091	-166487	-	AJ131724 TSC_hg19_v1_chr5_-_148033739 NM_000870	-166850	-	AJ633645 AM712912 Y10437 Y13584 AJ011371 BC095497 Y09586 AJ131725 AJ131726 AJ278979 AJ278980 AJ278981 AJ278982 Y08756 Y12505 Y12506 Y12507 AJ519673 BC074755 NM_001040169 NM_001040172 NM_001040173 NM_199453	-183978	-	NM_000024 TSC_hg19_v1_chr5_+_148206185 AK313151 BC012481 AK223025 BC073856 BC063486 X04827	5609	+	AB075865 AL832651 AK300420 TSC_hg19_v1_chr5_-_148442626 BC113879 BC114486 AY341075 AB070620 NM_024577	242094	-	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	320613	+	AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131724|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000870|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface##X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface##AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3	0.987987	CTCF.p2:-13:0.988
chr16	85403688	85403795	reg1015394.p1	8.362	+	BC093665 BC111944 AK126284 NM_198491	-257687	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-342371	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-358612	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	241280	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	243212	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	318801	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.876348	CTCF.p2:7:0.876
chr2	70531164	70531276	reg1016851.p1	8.362	+	AM393139 AB528755 AK225148 BC026293 TSC_hg19_v1_chr2_-_70529198 AL833147 BC014975 AK225151 AK309543 AK315877 AK027574 NM_032822	-2014	-	TSC_hg19_v1_chr2_-_70520848 X85373 BC022432 NM_003096 BC106055	-10355	-	CR456918 AB464221 BC071880 TSC_hg19_v1_chr2_-_70520827 BC070166 BC066302 BC000070	-10409	-	AK309220 AK309066 CU675103 BT006833 AF149096 AF149097 AF149098 X70340 K03222 M31172 AK290151 AK312899 BC005308 TSC_hg19_v1_chr2_-_70780995	249588	-	NM_001099691 NM_003236	249926	-	BC065525 NM_001185054	463626	-	AM393139|FAM136A|84908|family with sequence similarity 136, member A##AK225148|FAM136A|84908|family with sequence similarity 136, member A##BC026293|FAM136A|84908|family with sequence similarity 136, member A##AL833147|FAM136A|84908|family with sequence similarity 136, member A##BC014975|FAM136A|84908|family with sequence similarity 136, member A##AK225151|FAM136A|84908|family with sequence similarity 136, member A##AK309543|FAM136A|84908|family with sequence similarity 136, member A##AK315877|FAM136A|84908|family with sequence similarity 136, member A##AK027574|FAM136A|84908|family with sequence similarity 136, member A##NM_032822|FAM136A|84908|family with sequence similarity 136, member A##X85373|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC022432|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##NM_003096|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC106055|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##CR456918|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC071880|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC070166|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC066302|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##BC000070|SNRPG|6637|small nuclear ribonucleoprotein polypeptide G##AK309220|TGFA|7039|transforming growth factor, alpha##AK309066|TGFA|7039|transforming growth factor, alpha##BT006833|TGFA|7039|transforming growth factor, alpha##AF149096|TGFA|7039|transforming growth factor, alpha##AF149097|TGFA|7039|transforming growth factor, alpha##AF149098|TGFA|7039|transforming growth factor, alpha##X70340|TGFA|7039|transforming growth factor, alpha##K03222|TGFA|7039|transforming growth factor, alpha##M31172|TGFA|7039|transforming growth factor, alpha##AK290151|TGFA|7039|transforming growth factor, alpha##AK312899|TGFA|7039|transforming growth factor, alpha##BC005308|TGFA|7039|transforming growth factor, alpha##NM_001099691|TGFA|7039|transforming growth factor, alpha##NM_003236|TGFA|7039|transforming growth factor, alpha##BC065525|ADD2|119|adducin 2 (beta)##NM_001185054|ADD2|119|adducin 2 (beta)	0.363688	CTCF.p2:-11:0.364
chr6	84930637	84930780	reg1016434.p2	8.362	+	TSC_hg19_v1_chr6_+_84743459 AK090775 AX746611 NM_138409 BC010003 AK307078 AK292736 BC039855	-187302	+	TSC_hg19_v1_chr6_+_84569438 AB527313 AM393033	-361244	+	TSC_hg19_v1_chr6_+_84569407 AK313146 BC025380 AL832113	-361306	+	AB023226 AK308190 BC063632 NM_014895 TSC_hg19_v1_chr6_-_84937334	6616	-	TSC_hg19_v1_chr6_-_85472330 AJ010278	541617	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	542462	-	AK090775|MRAP2|112609|melanocortin 2 receptor accessory protein 2##NM_138409|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC010003|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK307078|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK292736|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC039855|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AM393033|CYB5R4|51167|cytochrome b5 reductase 4##AK313146|CYB5R4|51167|cytochrome b5 reductase 4##BC025380|CYB5R4|51167|cytochrome b5 reductase 4##AL832113|CYB5R4|51167|cytochrome b5 reductase 4##AB023226|KIAA1009|22832|KIAA1009##AK308190|KIAA1009|22832|KIAA1009##BC063632|KIAA1009|22832|KIAA1009##NM_014895|KIAA1009|22832|KIAA1009##AJ010278|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18	0.977067	CTCF.p2:24:0.977
chr7	127848608	127848714	reg1014093.p1	8.362	+	BC111561 BC111745 AF196976 AJ297858 NM_022143 AK172751 TSC_hg19_v1_chr7_-_127671066 AK314047	-177625	-	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	-556325	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	-556425	+	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	32672	+	CU680694 TSC_hg19_v1_chr7_-_127983862	135193	-	TSC_hg19_v1_chr7_-_127983944 BC013889 AK222716 AK300500 AK295976 AK001239 NM_001166135 NM_018077	135275	-	BC111561|LRRC4|64101|leucine rich repeat containing 4##BC111745|LRRC4|64101|leucine rich repeat containing 4##AF196976|LRRC4|64101|leucine rich repeat containing 4##AJ297858|LRRC4|64101|leucine rich repeat containing 4##NM_022143|LRRC4|64101|leucine rich repeat containing 4##AK172751|LRRC4|64101|leucine rich repeat containing 4##AK314047|LRRC4|64101|leucine rich repeat containing 4##BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin##BC013889|RBM28|55131|RNA binding motif protein 28##AK222716|RBM28|55131|RNA binding motif protein 28##AK300500|RBM28|55131|RNA binding motif protein 28##AK001239|RBM28|55131|RNA binding motif protein 28##NM_001166135|RBM28|55131|RNA binding motif protein 28##NM_018077|RBM28|55131|RNA binding motif protein 28	0.011504	
chr9	4759465	4759572	reg1015342.p2	8.361	+	AF183419 NM_001199853	-17476	-	NM_001199855	-17720	-	TSC_hg19_v1_chr9_-_4741309 NM_001199852 NM_016282	-18165	-	NM_005772 TSC_hg19_v1_chr9_+_4792833	33315	+	TSC_hg19_v1_chr9_+_4792936 AK022904 BC001025 AK225872	33405	+	TSC_hg19_v1_chr9_+_4792995 AJ276894 EU831474 EU831561 AF067172	33525	+	AF183419|AK3|50808|adenylate kinase 3##NM_001199853|AK3|50808|adenylate kinase 3##NM_001199855|AK3|50808|adenylate kinase 3##NM_001199852|AK3|50808|adenylate kinase 3##NM_016282|AK3|50808|adenylate kinase 3##NM_005772|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK022904|RCL1|10171|RNA terminal phosphate cyclase-like 1##BC001025|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK225872|RCL1|10171|RNA terminal phosphate cyclase-like 1##AJ276894|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831474|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831561|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF067172|RCL1|10171|RNA terminal phosphate cyclase-like 1	0.925253	CTCF.p2:-6:0.925
chr11	112045891	112046035	reg1017847.p1	8.360	+	BC029506 NM_031275 AF285600	-7855	+	AF380360 AY044641 TSC_hg19_v1_chr11_-_112034813 AY266351 D49950 BC007007 AK311301 BC007461 NM_001243211 NM_001562	-11205	-	TSC_hg19_v1_chr11_+_111957622 AB006202 AK075360 BC009574 BC012603 BC070307 BC071756 BT007238 CR456932 CU675071 DQ892701 DQ896292	-88342	+	NM_031938 AK315300 BC041656 BC047934 AK091783 AX747181 AJ290393 CU692016 AF276432	379	+	NM_001037290 AK027801 AK297853 AB096252	1142	+	TSC_hg19_v1_chr11_+_112097100 NM_000317 BC018029 D17400 AK310768 BC009686 AK307133 M97655 AM392676 AM393300 AM393668 DQ890961 DQ894133	51164	+	BC029506|TEX12|56158|testis expressed 12##NM_031275|TEX12|56158|testis expressed 12##AF285600|TEX12|56158|testis expressed 12##AF380360|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##AY044641|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##AY266351|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##D49950|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##BC007007|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##AK311301|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##BC007461|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##NM_001243211|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##NM_001562|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##AB006202|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##AK075360|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC009574|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC012603|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC070307|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC071756|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BT007238|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##CR456932|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##DQ892701|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##DQ896292|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##NM_031938|BCO2|83875|beta-carotene oxygenase 2##AK315300|BCO2|83875|beta-carotene oxygenase 2##BC041656|BCO2|83875|beta-carotene oxygenase 2##BC047934|BCO2|83875|beta-carotene oxygenase 2##AK091783|BCO2|83875|beta-carotene oxygenase 2##AJ290393|BCO2|83875|beta-carotene oxygenase 2##AF276432|BCO2|83875|beta-carotene oxygenase 2##NM_001037290|BCO2|83875|beta-carotene oxygenase 2##AK027801|BCO2|83875|beta-carotene oxygenase 2##AK297853|BCO2|83875|beta-carotene oxygenase 2##AB096252|BCO2|83875|beta-carotene oxygenase 2##NM_000317|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC018029|PTS|5805|6-pyruvoyltetrahydropterin synthase##D17400|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK310768|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC009686|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK307133|PTS|5805|6-pyruvoyltetrahydropterin synthase##M97655|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM392676|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393300|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393668|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ890961|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ894133|PTS|5805|6-pyruvoyltetrahydropterin synthase	0.904591	CTCF.p2:-14:0.905
chr13	42128928	42129074	reg1016780.p1	8.359	+	TSC_hg19_v1_chr13_+_42031690 BC038706 AF036549	-97301	+	TSC_hg19_v1_chr13_+_42031685 BC066334	-97318	+	TSC_hg19_v1_chr13_+_42031539 NM_014059	-97450	+	TSC_hg19_v1_chr13_-_42535066 AK095155	406079	-	TSC_hg19_v1_chr13_-_42535247 AB590583 BC131802 BC053674 NM_001009814 NM_015058	406188	-	AK289546 NM_001204504	485170	+	BC038706|C13orf15|28984|chromosome 13 open reading frame 15##AF036549|C13orf15|28984|chromosome 13 open reading frame 15##BC066334|C13orf15|28984|chromosome 13 open reading frame 15##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15##AK095155|KIAA0564|23078|KIAA0564##BC131802|KIAA0564|23078|KIAA0564##BC053674|KIAA0564|23078|KIAA0564##NM_001009814|KIAA0564|23078|KIAA0564##NM_015058|KIAA0564|23078|KIAA0564##AK289546|DGKH|160851|diacylglycerol kinase, eta##NM_001204504|DGKH|160851|diacylglycerol kinase, eta	0.810948	CTCF.p2:20:0.811
chr20	62917001	62917144	reg1010790.p1	8.359	+	TSC_hg19_v1_chr20_+_62887100 NM_001104925 NM_018257 BC040945 BC032332 AK001745 BC045775	-29911	+	AB020642 NM_004535 TSC_hg19_v1_chr20_+_62795840	-121239	+	TSC_hg19_v1_chr20_+_62795804 BC018917	-121282	+	None	None	None	None	None	None	None	None	None	NM_001104925|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##NM_018257|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC040945|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC032332|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##AK001745|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC045775|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##AB020642|MYT1|4661|myelin transcription factor 1##NM_004535|MYT1|4661|myelin transcription factor 1##BC018917|MYT1|4661|myelin transcription factor 1	1.110029	CTCF.p2:-32:0.287	CTCF.p2:-60:0.632
chr8	101539266	101539399	reg1017991.p1	8.359	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-217047	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-217151	-	AB271913 AB271914 AB029316 NM_015435	-223861	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	32608	-	AK093906 AX748361 NM_152628	122560	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	194474	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr8	57114901	57115028	reg1017906.p1	8.359	+	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	-88424	-	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	-127878	-	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-322444	+	TSC_hg19_v1_chr8_-_57123833 U65002	8871	-	AK296933 AK313663 NM_001114634 NM_001114635 NM_002655 TSC_hg19_v1_chr8_-_57123860	8897	-	NM_001011667 NM_001011668 NM_001011669 NM_001011670 NM_001011671 NM_024300 TSC_hg19_v1_chr8_+_57124314	9350	+	BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1##AK296933|PLAG1|5324|pleiomorphic adenoma gene 1##AK313663|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001114634|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001114635|PLAG1|5324|pleiomorphic adenoma gene 1##NM_002655|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001011667|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011668|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011669|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011670|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011671|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_024300|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7	0.218554	CTCF.p2:-16:0.219
chr16	31310426	31310541	reg1015834.p2	8.358	+	TSC_hg19_v1_chr16_+_31271330 AK127637 AB384734	-39129	+	TSC_hg19_v1_chr16_+_31271311 J03925 BC096346 BC096347 BC096348 BC099660	-39166	+	TSC_hg19_v1_chr16_+_31271295 AK057856 NM_000632 NM_001145808 M18044	-39190	+	TSC_hg19_v1_chr16_+_31366508 AK296666 AK309642 NM_000887	56009	+	TSC_hg19_v1_chr16_+_31366521 M81695	56039	+	TSC_hg19_v1_chr16_+_31366549 BC037577 BC038237 DQ892486 DQ895697	56068	+	AK127637|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##J03925|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096346|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096347|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096348|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC099660|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##AK057856|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##NM_000632|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##NM_001145808|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##M18044|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##AK296666|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##AK309642|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##NM_000887|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##M81695|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##BC037577|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##BC038237|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ892486|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ895697|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)	0.017003	
chr16	74657248	74657381	reg1015610.p1	8.358	+	TSC_hg19_v1_chr16_-_74641016 NM_001145666 NM_001145667 NM_012201	-16287	-	TSC_hg19_v1_chr16_-_74641004 AK027032 AK304156 U28811 BC060822	-16310	-	TSC_hg19_v1_chr16_-_74640996 BC040133 U64791 BC031836	-16359	-	TSC_hg19_v1_chr16_-_74700738 BC059371	43416	-	TSC_hg19_v1_chr16_-_74700758 AK291200	43438	-	TSC_hg19_v1_chr16_-_74700775 NM_018124	43463	-	NM_001145666|GLG1|2734|golgi glycoprotein 1##NM_001145667|GLG1|2734|golgi glycoprotein 1##NM_012201|GLG1|2734|golgi glycoprotein 1##AK027032|GLG1|2734|golgi glycoprotein 1##AK304156|GLG1|2734|golgi glycoprotein 1##U28811|GLG1|2734|golgi glycoprotein 1##BC060822|GLG1|2734|golgi glycoprotein 1##BC040133|GLG1|2734|golgi glycoprotein 1##U64791|GLG1|2734|golgi glycoprotein 1##BC031836|GLG1|2734|golgi glycoprotein 1##BC059371|RFWD3|55159|ring finger and WD repeat domain 3##AK291200|RFWD3|55159|ring finger and WD repeat domain 3##NM_018124|RFWD3|55159|ring finger and WD repeat domain 3	0.99237	CTCF.p2:23:0.992
chr3	183968170	183968309	reg1015987.p2	8.358	+	TSC_hg19_v1_chr3_+_183967514 AF428263	-722	+	TSC_hg19_v1_chr3_+_183967472 BC012449	-768	+	TSC_hg19_v1_chr3_+_183967444 NM_014693 NM_032331 BC005835 BC069005	-802	+	TSC_hg19_v1_chr3_-_183979153 BC105077 BC105079 AY037149 NM_033259	11037	-	BC142950 NM_001037324 NM_001100120 NM_001100121 TSC_hg19_v1_chr3_+_183993819 AB011176 AK296541 AF521189 AY359003 AF192531 AF428264 AK293713 BC146830 AB383918	25629	+	TSC_hg19_v1_chr3_+_184017028 D78151 NM_002808 AL162014 AK315474 AK297256 BC002997	48771	+	AF428263|ECE2|9718|endothelin converting enzyme 2##BC012449|ECE2|9718|endothelin converting enzyme 2##NM_014693|ECE2|9718|endothelin converting enzyme 2##NM_032331|ECE2|9718|endothelin converting enzyme 2##BC005835|ECE2|9718|endothelin converting enzyme 2##BC069005|ECE2|9718|endothelin converting enzyme 2##BC105077|CAMK2N2|94032|calcium/calmodulin-dependent protein kinase II inhibitor 2##BC105079|CAMK2N2|94032|calcium/calmodulin-dependent protein kinase II inhibitor 2##AY037149|CAMK2N2|94032|calcium/calmodulin-dependent protein kinase II inhibitor 2##NM_033259|CAMK2N2|94032|calcium/calmodulin-dependent protein kinase II inhibitor 2##BC142950|ECE2|9718|endothelin converting enzyme 2##NM_001037324|ECE2|9718|endothelin converting enzyme 2##NM_001100120|ECE2|9718|endothelin converting enzyme 2##NM_001100121|ECE2|9718|endothelin converting enzyme 2##AB011176|ECE2|9718|endothelin converting enzyme 2##AK296541|ECE2|9718|endothelin converting enzyme 2##AF521189|ECE2|9718|endothelin converting enzyme 2##AY359003|ECE2|9718|endothelin converting enzyme 2##AF192531|ECE2|9718|endothelin converting enzyme 2##AF428264|ECE2|9718|endothelin converting enzyme 2##AK293713|ECE2|9718|endothelin converting enzyme 2##BC146830|ECE2|9718|endothelin converting enzyme 2##D78151|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##NM_002808|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##AL162014|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##AK315474|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##AK297256|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##BC002997|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2	0.38765	CTCF.p2:-11:0.206
chr14	24506052	24506173	reg1016724.p1	8.357	+	GQ871923 GQ871922 BC171914 BC171918 GQ871926 NM_001082488	-448	+	NM_198083 BC101814 BC101812 AK301373 BC000663 BC006125	-48040	+	NM_001193636 NM_001193637 GQ871924 AY616183 AY920361 AY920362 AY943857 BC041992 NM_001193635 GQ871921 GQ871925 GU564234 GU564235	-66914	+	TSC_hg19_v1_chr14_+_24521201 NM_138360	15064	+	AK314182 BC018046 AB009288 NM_006032 TSC_hg19_v1_chr14_+_24540770 AK294460 AK222675 AL137688	34657	+	M95925 M81840 NM_006177 BC012395 AB593104 AB593106 AB593102	47718	-	GQ871923|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##GQ871922|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##BC171914|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##BC171918|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##NM_001082488|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##NM_198083|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC101814|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC101812|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AK301373|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC000663|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC006125|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##NM_001193636|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##NM_001193637|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##GQ871924|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##AY616183|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AY920361|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AY920362|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AY943857|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##NM_001193635|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##GQ871921|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##GU564234|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##GU564235|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##NM_138360|LRRC16B|90668|leucine rich repeat containing 16B##AK314182|CPNE6|9362|copine VI (neuronal)##BC018046|CPNE6|9362|copine VI (neuronal)##AB009288|CPNE6|9362|copine VI (neuronal)##NM_006032|CPNE6|9362|copine VI (neuronal)##AK294460|CPNE6|9362|copine VI (neuronal)##AK222675|CPNE6|9362|copine VI (neuronal)##AL137688|CPNE6|9362|copine VI (neuronal)##M95925|NRL|4901|neural retina leucine zipper##M81840|NRL|4901|neural retina leucine zipper##NM_006177|NRL|4901|neural retina leucine zipper##BC012395|NRL|4901|neural retina leucine zipper##AB593104|NRL|4901|neural retina leucine zipper##AB593106|NRL|4901|neural retina leucine zipper##AB593102|NRL|4901|neural retina leucine zipper	0.422683	CTCF.p2:19:0.423
chr17	66395292	66395445	reg1017522.p1	8.357	+	AX750577 AX750581 U79745 AK313121 AK290417 BC064832 NM_001174166 NM_004694	-108038	-	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	-140034	+	TSC_hg19_v1_chr17_+_66244233 AF208856	-151125	+	AY691424 CU691786 TSC_hg19_v1_chr17_-_66453638 BC039867 AK301830 AK000917 NM_017983	58243	-	TSC_hg19_v1_chr17_+_66508140 NM_212471 Y07642	112755	+	TSC_hg19_v1_chr17_+_66508161 BC093042	112798	+	AX750581|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G##AY691424|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##BC039867|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK301830|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK000917|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_017983|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_212471|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##Y07642|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC093042|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	0.170992	
chr5	172199070	172199204	reg1016521.p1	8.357	+	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	-926	-	AF275799 TSC_hg19_v1_chr5_-_172083715	-115494	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-130884	+	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	62181	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	187311	+	NM_003945 TSC_hg19_v1_chr5_+_172410801 BC119715 BC119714 AK312068 Y15286	211645	+	X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1##NM_003945|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119715|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119714|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##AK312068|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##Y15286|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1	0.235397	CTCF.p2:13:0.219
chr13	87926592	87926743	reg1016116.p1	8.356	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-1553228	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-3470167	-	TSC_hg19_v1_chr13_-_84456424 BC051738	-3470242	-	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	398202	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	4124237	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	5952760	+	BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6	0.361949	CTCF.p2:1:0.362
chr15	66209062	66209193	reg1016317.p1	8.356	+	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	-47280	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-124534	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	-124654	-	TSC_hg19_v1_chr15_-_66321664 AK054827	112566	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	336950	-	NM_133375 AK295392 BC022089	376518	+	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	0.069244	
chr21	47393666	47393780	reg1016857.p1	8.356	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	-123835	+	TSC_hg19_v1_chr21_+_47063638 AK310131	-330094	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-431391	-	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	7962	+	TSC_hg19_v1_chr21_+_47518062 NM_001849 NM_058174 NM_058175 BC065509	124327	+	AY029208 EU832113 EU832207 TSC_hg19_v1_chr21_+_47531438	137680	+	AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##AK310131|PCBP3|54039|poly(rC) binding protein 3##U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1##NM_001849|COL6A2|1292|collagen, type VI, alpha 2##NM_058174|COL6A2|1292|collagen, type VI, alpha 2##NM_058175|COL6A2|1292|collagen, type VI, alpha 2##BC065509|COL6A2|1292|collagen, type VI, alpha 2##AY029208|COL6A2|1292|collagen, type VI, alpha 2##EU832113|COL6A2|1292|collagen, type VI, alpha 2##EU832207|COL6A2|1292|collagen, type VI, alpha 2	0.0	
chr4	24421169	24421289	reg1014871.p2	8.356	+	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	-529576	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	-1726637	+	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	-1903675	-	AF279891 TSC_hg19_v1_chr4_-_24586127	164847	-	TSC_hg19_v1_chr4_-_24586154 AK303506 BC035974	164931	-	AB001636 TSC_hg19_v1_chr4_-_24586176	164947	-	AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.997791	CTCF.p2:10:0.998
chr7	81130705	81130834	reg1016453.p1	8.356	+	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-582095	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-582335	-	HM217020 HM217021 HM217022 HM217023 HM217024 HM217025 HM217026 AB590184 CU678951 DQ893062 DQ896314 TSC_hg19_v1_chr7_+_80276126	-854722	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	268605	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	942077	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	942311	-	AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##HM217020|CD36|948|CD36 molecule (thrombospondin receptor)##HM217021|CD36|948|CD36 molecule (thrombospondin receptor)##HM217022|CD36|948|CD36 molecule (thrombospondin receptor)##HM217023|CD36|948|CD36 molecule (thrombospondin receptor)##HM217024|CD36|948|CD36 molecule (thrombospondin receptor)##HM217025|CD36|948|CD36 molecule (thrombospondin receptor)##HM217026|CD36|948|CD36 molecule (thrombospondin receptor)##DQ893062|CD36|948|CD36 molecule (thrombospondin receptor)##DQ896314|CD36|948|CD36 molecule (thrombospondin receptor)##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1	0.936333	CTCF.p2:11:0.337	CTCF.p2:-33:0.599
chr1	244766860	244767001	reg1017311.p1	8.355	+	NM_001130957 NM_001242340 NM_173807 TSC_hg19_v1_chr1_+_244624690 BC032859 BC028392 AK303059 BX648685 AK302609 DQ891006 EU176575 CU689566	-142229	+	TSC_hg19_v1_chr1_-_244615392 AK308749 NM_001126	-151592	-	CU680302 EU831433 EU831525 TSC_hg19_v1_chr1_-_244615212 AK025514 AK303886 BC012356	-151754	-	TSC_hg19_v1_chr1_+_244816350 NM_016076	49421	+	AK314664 TSC_hg19_v1_chr1_+_244816381	49451	+	TSC_hg19_v1_chr1_+_244816428 BC004485 BC020640	49478	+	NM_001130957|C1orf101|257044|chromosome 1 open reading frame 101##NM_001242340|C1orf101|257044|chromosome 1 open reading frame 101##NM_173807|C1orf101|257044|chromosome 1 open reading frame 101##BC032859|C1orf101|257044|chromosome 1 open reading frame 101##BC028392|C1orf101|257044|chromosome 1 open reading frame 101##AK303059|C1orf101|257044|chromosome 1 open reading frame 101##BX648685|C1orf101|257044|chromosome 1 open reading frame 101##AK302609|C1orf101|257044|chromosome 1 open reading frame 101##DQ891006|C1orf101|257044|chromosome 1 open reading frame 101##EU176575|C1orf101|257044|chromosome 1 open reading frame 101##AK308749|ADSS|159|adenylosuccinate synthase##NM_001126|ADSS|159|adenylosuccinate synthase##EU831433|ADSS|159|adenylosuccinate synthase##EU831525|ADSS|159|adenylosuccinate synthase##AK025514|ADSS|159|adenylosuccinate synthase##AK303886|ADSS|159|adenylosuccinate synthase##BC012356|ADSS|159|adenylosuccinate synthase##NM_016076|PPPDE1|51029|PPPDE peptidase domain containing 1##AK314664|PPPDE1|51029|PPPDE peptidase domain containing 1##BC004485|PPPDE1|51029|PPPDE peptidase domain containing 1##BC020640|PPPDE1|51029|PPPDE peptidase domain containing 1	0.999761	CTCF.p2:-20:1.000
chr4	139840388	139840522	reg1017670.p1	8.355	+	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	-677091	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-1386813	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-1386863	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	96538	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	164948	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	165156	-	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.967774	CTCF.p2:8:0.968
chr16	50678814	50678935	reg1015448.p2	8.354	+	TSC_hg19_v1_chr16_-_50647562 AK124375	-31296	-	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	-96548	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	-276044	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	36303	-	TSC_hg19_v1_chr16_-_50715246 NM_001144972 NM_153337 NM_182854	36427	-	AF178930 AY187243 NM_022162 AY187244 AY187246 AB527390	52227	+	BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20##NM_001144972|SNX20|124460|sorting nexin 20##NM_153337|SNX20|124460|sorting nexin 20##NM_182854|SNX20|124460|sorting nexin 20##AF178930|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187243|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_022162|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187244|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187246|NOD2|64127|nucleotide-binding oligomerization domain containing 2	0.798323	CTCF.p2:-10:0.798
chr3	48990073	48990206	reg1018888.p1	8.354	+	AK097724 NM_001123040	-33322	-	TSC_hg19_v1_chr3_+_48956280 NM_006321 BC000422	-33856	+	TSC_hg19_v1_chr3_+_48956261 AK223550	-33883	+	TSC_hg19_v1_chr3_+_49027682 BC047566 NM_177938 NM_177939 AL713728 BC011710 AY198406 BC018731	37362	+	BC060321 TSC_hg19_v1_chr3_+_49027877 CU680020 AK000269	37721	+	AK295145 NM_018031 TSC_hg19_v1_chr3_+_49044739	54477	+	AK097724|C3orf71|646450|chromosome 3 open reading frame 71##NM_001123040|C3orf71|646450|chromosome 3 open reading frame 71##NM_006321|ARIH2|10425|ariadne homolog 2 (Drosophila)##BC000422|ARIH2|10425|ariadne homolog 2 (Drosophila)##AK223550|ARIH2|10425|ariadne homolog 2 (Drosophila)##BC047566|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##NM_177938|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##NM_177939|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AL713728|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC011710|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AY198406|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC018731|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC060321|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AK000269|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AK295145|WDR6|11180|WD repeat domain 6##NM_018031|WDR6|11180|WD repeat domain 6	0.990087	CTCF.p2:0:0.990
chr6	2846813	2846993	reg1002133.p2	8.354	+	TSC_hg19_v1_chr6_-_2842202 AK304641 AK309765	-4706	-	TSC_hg19_v1_chr6_-_2842095 BC009015 NM_030666 M93056 AK298044 AK312973 AK223370 AK291327	-4821	-	TSC_hg19_v1_chr6_-_2840686 BT006928 AB590702	-6151	-	TSC_hg19_v1_chr6_-_2903544 BC002538 AB060690 L40378 AK314842 NM_004155	56605	-	AK098566 TSC_hg19_v1_chr6_-_2971511	124511	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	124908	-	AK304641|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK309765|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BT006928|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC002538|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AB060690|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##L40378|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK314842|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##NM_004155|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK098566|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6	0.0	
chr11	129566086	129566188	reg1015894.p2	8.353	+	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	-320256	+	EF127492 NM_001142685	-504045	-	AB018255 AY194287 TSC_hg19_v1_chr11_-_128894084 AB079856 NM_014715	-672076	-	TSC_hg19_v1_chr11_+_129685744 AK098106 NM_138788 AK290283 AK292058	119607	+	NM_006165 X80878	196766	-	TSC_hg19_v1_chr11_-_129765453 BC063280	199305	-	AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2##EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##AB018255|ARHGAP32|9743|Rho GTPase activating protein 32##AY194287|ARHGAP32|9743|Rho GTPase activating protein 32##AB079856|ARHGAP32|9743|Rho GTPase activating protein 32##NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32##AK098106|TMEM45B|120224|transmembrane protein 45B##NM_138788|TMEM45B|120224|transmembrane protein 45B##AK290283|TMEM45B|120224|transmembrane protein 45B##AK292058|TMEM45B|120224|transmembrane protein 45B##NM_006165|NFRKB|4798|nuclear factor related to kappaB binding protein##X80878|NFRKB|4798|nuclear factor related to kappaB binding protein##BC063280|NFRKB|4798|nuclear factor related to kappaB binding protein	0.056191	
chr13	46758672	46758783	reg1014661.p2	8.353	+	TSC_hg19_v1_chr13_-_46756327 BC053839 M34426 BC010271 AK223305 AK093568 NM_002298	-2335	-	TSC_hg19_v1_chr13_-_46756297 BC007673 AB208984 AK312393	-2419	-	TSC_hg19_v1_chr13_-_46756291 J02923	-2435	-	AK300183 BC032311 BC043488 TSC_hg19_v1_chr13_-_46961376 AK307854	202618	-	TSC_hg19_v1_chr13_-_46961379 AK025215 AK293034	202657	-	NM_025113	202907	-	BC053839|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##M34426|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##BC010271|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AK223305|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##NM_002298|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##BC007673|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AB208984|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AK312393|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AK300183|KIAA0226L|80183|KIAA0226-like##BC032311|KIAA0226L|80183|KIAA0226-like##BC043488|KIAA0226L|80183|KIAA0226-like##AK307854|KIAA0226L|80183|KIAA0226-like##AK025215|KIAA0226L|80183|KIAA0226-like##AK293034|KIAA0226L|80183|KIAA0226-like##NM_025113|KIAA0226L|80183|KIAA0226-like	0.305013	CTCF.p2:-1:0.305
chr3	131899198	131899344	reg1016698.p2	8.352	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	-145431	-	TSC_hg19_v1_chr3_-_131221816 CR456720 CU678442 BC002345 X06323 BC003375 AK301377 AK296626 NM_007208	-677517	-	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	-798620	+	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	136967	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	137017	+	AB014578 BC151246 TSC_hg19_v1_chr3_+_132136540 AY779857 BC043583 NM_015268	237256	+	AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##CR456720|MRPL3|11222|mitochondrial ribosomal protein L3##X06323|MRPL3|11222|mitochondrial ribosomal protein L3##BC003375|MRPL3|11222|mitochondrial ribosomal protein L3##AK301377|MRPL3|11222|mitochondrial ribosomal protein L3##AK296626|MRPL3|11222|mitochondrial ribosomal protein L3##NM_007208|MRPL3|11222|mitochondrial ribosomal protein L3##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate##AB014578|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC151246|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AY779857|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC043583|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##NM_015268|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13	0.997479	CTCF.p2:7:0.997
chr7	139526987	139527132	reg1016849.p1	8.352	+	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	-49020	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	-49154	-	NM_001080511	-318386	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	2033	+	AL137255 TSC_hg19_v1_chr7_-_139762712 BC044660	235552	-	BC081541 NM_022750	236461	-	BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AL137255|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##BC044660|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##BC081541|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##NM_022750|PARP12|64761|poly (ADP-ribose) polymerase family, member 12	0.596372	CTCF.p2:21:0.596
chr1	159041864	159042044	reg1015985.p1	8.351	+	NM_001206567 NM_005531 TSC_hg19_v1_chr1_+_158979716 AF208043 M63838 AB208989 BC017059 AF086545 AK296228 AK307957	-62164	+	NM_152501 NM_198928 NM_198929 NM_198930 AY185344 AY185345 AY185346 AY185347 BC090944 AK308350 BC020822 BC073133 BC114470 BC139741	-140595	+	TSC_hg19_v1_chr1_+_158801140 BC020715 BC032319 AK290392 AK313210 M81750 NM_002432	-240818	+	AK292042 BC010940 AF024714 NM_004833	4646	-	AK289541 NM_021189 TSC_hg19_v1_chr1_+_159141404 AK308915 NM_001127173 AF363367 AY358332 AF062733 BC033819 AY046418 AF529206 DQ890848 DQ894002	99511	+	AK291593 NM_002036	131848	+	NM_001206567|IFI16|3428|interferon, gamma-inducible protein 16##NM_005531|IFI16|3428|interferon, gamma-inducible protein 16##AF208043|IFI16|3428|interferon, gamma-inducible protein 16##M63838|IFI16|3428|interferon, gamma-inducible protein 16##AB208989|IFI16|3428|interferon, gamma-inducible protein 16##BC017059|IFI16|3428|interferon, gamma-inducible protein 16##AF086545|IFI16|3428|interferon, gamma-inducible protein 16##AK296228|IFI16|3428|interferon, gamma-inducible protein 16##AK307957|IFI16|3428|interferon, gamma-inducible protein 16##NM_152501|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198928|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198929|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198930|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185344|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185345|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185346|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185347|PYHIN1|149628|pyrin and HIN domain family, member 1##BC090944|PYHIN1|149628|pyrin and HIN domain family, member 1##AK308350|PYHIN1|149628|pyrin and HIN domain family, member 1##BC020822|PYHIN1|149628|pyrin and HIN domain family, member 1##BC073133|PYHIN1|149628|pyrin and HIN domain family, member 1##BC114470|PYHIN1|149628|pyrin and HIN domain family, member 1##BC139741|PYHIN1|149628|pyrin and HIN domain family, member 1##BC020715|MNDA|4332|myeloid cell nuclear differentiation antigen##BC032319|MNDA|4332|myeloid cell nuclear differentiation antigen##AK290392|MNDA|4332|myeloid cell nuclear differentiation antigen##AK313210|MNDA|4332|myeloid cell nuclear differentiation antigen##M81750|MNDA|4332|myeloid cell nuclear differentiation antigen##NM_002432|MNDA|4332|myeloid cell nuclear differentiation antigen##AK292042|AIM2|9447|absent in melanoma 2##BC010940|AIM2|9447|absent in melanoma 2##AF024714|AIM2|9447|absent in melanoma 2##NM_004833|AIM2|9447|absent in melanoma 2##AK289541|CADM3|57863|cell adhesion molecule 3##NM_021189|CADM3|57863|cell adhesion molecule 3##AK308915|CADM3|57863|cell adhesion molecule 3##NM_001127173|CADM3|57863|cell adhesion molecule 3##AF363367|CADM3|57863|cell adhesion molecule 3##AY358332|CADM3|57863|cell adhesion molecule 3##AF062733|CADM3|57863|cell adhesion molecule 3##BC033819|CADM3|57863|cell adhesion molecule 3##AY046418|CADM3|57863|cell adhesion molecule 3##AF529206|CADM3|57863|cell adhesion molecule 3##DQ890848|CADM3|57863|cell adhesion molecule 3##DQ894002|CADM3|57863|cell adhesion molecule 3##AK291593|DARC|2532|Duffy blood group, chemokine receptor##NM_002036|DARC|2532|Duffy blood group, chemokine receptor	0.169198	
chr17	37331297	37331400	reg1014654.p2	8.351	+	NM_001143968	-8935	-	TSC_hg19_v1_chr17_+_37321318 AK093715	-10027	+	TSC_hg19_v1_chr17_-_37307891 NM_020405	-23453	-	TSC_hg19_v1_chr17_-_37350083 AB209176	18745	-	CU691480 DQ891688 EU176608 AY393857 L06111 L06112 M76560 TSC_hg19_v1_chr17_-_37353923 BC037311 AB054985 M92301 M92302 M92303 AK289729 AK297643 AK312385 NM_000723 NM_199247 NM_199248	22507	-	BC095445 NM_000981 TSC_hg19_v1_chr17_+_37356569 AB055766 BC066315 AK130962 AK311858 X63527	25204	+	NM_001143968|ARL5C|390790|ADP-ribosylation factor-like 5C##AK093715|LOC284108|284108|uncharacterized LOC284108##NM_020405|PLXDC1|57125|plexin domain containing 1##AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##DQ891688|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##EU176608|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##AY393857|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##L06111|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##L06112|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##M76560|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##BC037311|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##AB054985|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##M92301|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##M92302|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##M92303|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##AK289729|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##AK297643|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##AK312385|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##NM_000723|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##NM_199247|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##NM_199248|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##BC095445|RPL19|6143|ribosomal protein L19##NM_000981|RPL19|6143|ribosomal protein L19##AB055766|RPL19|6143|ribosomal protein L19##BC066315|RPL19|6143|ribosomal protein L19##AK130962|RPL19|6143|ribosomal protein L19##AK311858|RPL19|6143|ribosomal protein L19##X63527|RPL19|6143|ribosomal protein L19	0.998565	CTCF.p2:7:0.999
chr20	52560378	52560515	reg1015249.p1	8.351	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-349647	-	AF041259 NM_006526	-360811	-	AK302570 NM_001193421	-758625	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	126616	-	AK315220 NM_003657	126857	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	230074	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.933531	CTCF.p2:14:0.934
chr6	50232841	50232971	reg1017778.p1	8.350	+	DQ012016 NM_001037498	-216543	-	DQ012014 DQ012015 NM_001037497 NM_001037728	-243236	-	DQ012017 NM_001037729	-295569	-	AY028376 NM_172238	448350	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	553629	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	1719489	-	DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##DQ012014|DEFB110|245913|defensin, beta 110 locus##DQ012015|DEFB110|245913|defensin, beta 110 locus##NM_001037497|DEFB110|245913|defensin, beta 110 locus##NM_001037728|DEFB110|245913|defensin, beta 110 locus##DQ012017|DEFB113|245927|defensin, beta 113##NM_001037729|DEFB113|245927|defensin, beta 113##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	0.943023	CTCF.p2:9:0.943
chr7	108093282	108093421	reg1017997.p1	8.349	+	AJ001057 AB385311 NM_001037132	-212799	-	BC142619 BC140804 BC144591 AF028816 AK300385 NM_007356	-322559	-	AB384752 TSC_hg19_v1_chr7_-_107643594 BC113455 M61916 BX648251 AK303501 AK309921 AK307611 BC044633 BC052598 NM_002291	-449746	-	TSC_hg19_v1_chr7_-_108096830 BC114570 BC115736 AB002341 BX538010 AK299870 BC098401 NM_001193582 NM_001193583 NM_001193584 NM_005010	3578	-	TSC_hg19_v1_chr7_-_108142934 BC005203 AK002115	49621	-	AL834147 TSC_hg19_v1_chr7_-_108166546	73182	-	AJ001057|NRCAM|4897|neuronal cell adhesion molecule##NM_001037132|NRCAM|4897|neuronal cell adhesion molecule##BC142619|LAMB4|22798|laminin, beta 4##BC140804|LAMB4|22798|laminin, beta 4##BC144591|LAMB4|22798|laminin, beta 4##AF028816|LAMB4|22798|laminin, beta 4##AK300385|LAMB4|22798|laminin, beta 4##NM_007356|LAMB4|22798|laminin, beta 4##BC113455|LAMB1|3912|laminin, beta 1##M61916|LAMB1|3912|laminin, beta 1##BX648251|LAMB1|3912|laminin, beta 1##AK303501|LAMB1|3912|laminin, beta 1##AK309921|LAMB1|3912|laminin, beta 1##AK307611|LAMB1|3912|laminin, beta 1##BC044633|LAMB1|3912|laminin, beta 1##BC052598|LAMB1|3912|laminin, beta 1##NM_002291|LAMB1|3912|laminin, beta 1##BC114570|NRCAM|4897|neuronal cell adhesion molecule##BC115736|NRCAM|4897|neuronal cell adhesion molecule##AB002341|NRCAM|4897|neuronal cell adhesion molecule##BX538010|NRCAM|4897|neuronal cell adhesion molecule##AK299870|NRCAM|4897|neuronal cell adhesion molecule##BC098401|NRCAM|4897|neuronal cell adhesion molecule##NM_001193582|NRCAM|4897|neuronal cell adhesion molecule##NM_001193583|NRCAM|4897|neuronal cell adhesion molecule##NM_001193584|NRCAM|4897|neuronal cell adhesion molecule##NM_005010|NRCAM|4897|neuronal cell adhesion molecule##BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8##AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8##AL834147|PNPLA8|50640|patatin-like phospholipase domain containing 8	0.231477	CTCF.p2:14:0.231
chr7	8405255	8405363	reg1017337.p1	8.349	+	TSC_hg19_v1_chr7_-_8302174 U38260 L01100 BC008640 BC005922 NM_004968	-103136	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	-103518	-	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	-103593	-	TSC_hg19_v1_chr7_+_8473238 AK095624	67929	+	AB047362 AB073665 NM_152745 TSC_hg19_v1_chr7_+_8473633	68301	+	AK315141 TSC_hg19_v1_chr7_+_8474016 AK091655 BC047505 AK296248	68811	+	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa##L01100|ICA1|3382|islet cell autoantigen 1, 69kDa##BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa##BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##AK095624|NXPH1|30010|neurexophilin 1##AB047362|NXPH1|30010|neurexophilin 1##AB073665|NXPH1|30010|neurexophilin 1##NM_152745|NXPH1|30010|neurexophilin 1##AK315141|NXPH1|30010|neurexophilin 1##AK091655|NXPH1|30010|neurexophilin 1##BC047505|NXPH1|30010|neurexophilin 1##AK296248|NXPH1|30010|neurexophilin 1	0.998882	CTCF.p2:10:0.999
chr19	1605936	1606058	reg1014447.p2	8.348	+	TSC_hg19_v1_chr19_-_1605464 NM_006830	-524	-	AK312053 TSC_hg19_v1_chr19_-_1605462	-535	-	TSC_hg19_v1_chr19_-_1605429 BC000462 BC003594 D55636	-566	-	AB385055 BC110579 BC110580 M31523 NM_001136139	44268	-	M31222 NM_003200 TSC_hg19_v1_chr19_-_1652346	46342	-	NM_001080488 TSC_hg19_v1_chr19_+_1753823	147755	+	NM_006830|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##AK312053|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##BC000462|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##BC003594|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##D55636|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##BC110580|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##M31523|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_001136139|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_001080488|ONECUT3|390874|one cut homeobox 3	0.323949	CTCF.p2:-22:0.324
chr21	35763210	35763373	reg1017214.p2	8.348	+	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	-15466	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	-26945	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	-317362	+	AY789480 NM_001127670 EU008570	64781	-	AK311384 AY789479 EU008568 EU008569 AK313543 BC036452 NM_001127668 NM_001127669	68587	-	AK304336 NM_000219 BC069055	120361	-	NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK311384|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AY789479|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008568|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008569|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK313543|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC036452|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127668|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127669|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK304336|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_000219|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC069055|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1	0.930119	CTCF.p2:-18:0.930
chr16	8223264	8223397	reg1018629.p1	8.347	+	AF094849 AF109106 AF229057 NM_145891 NM_145892 NM_145893	-840580	+	AK001027 NM_001142334	-1399521	+	TSC_hg19_v1_chr16_+_6533765 BC033885	-1689555	+	TSC_hg19_v1_chr16_+_8715563 NM_024109 AK315383 BC001908 AK022495	492210	+	TSC_hg19_v1_chr16_+_8768473 NM_020686 BX537362 AK096146 BC031413 BC015628	545132	+	NM_000663 TSC_hg19_v1_chr16_+_8806841 BC013965	583505	+	AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_024109|METTL22|79091|methyltransferase like 22##AK315383|METTL22|79091|methyltransferase like 22##BC001908|METTL22|79091|methyltransferase like 22##AK022495|METTL22|79091|methyltransferase like 22##NM_020686|ABAT|18|4-aminobutyrate aminotransferase##BX537362|ABAT|18|4-aminobutyrate aminotransferase##AK096146|ABAT|18|4-aminobutyrate aminotransferase##BC031413|ABAT|18|4-aminobutyrate aminotransferase##BC015628|ABAT|18|4-aminobutyrate aminotransferase##NM_000663|ABAT|18|4-aminobutyrate aminotransferase##BC013965|ABAT|18|4-aminobutyrate aminotransferase	0.997994	CTCF.p2:-4:0.998
chr2	103778042	103778130	reg1012705.p1	8.347	+	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	-399504	+	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	-424704	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	-424753	-	TSC_hg19_v1_chr2_-_105467912 AK096498	1689830	-	TSC_hg19_v1_chr2_+_105471877 NM_006236	1693812	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	1876428	+	CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182##AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##NM_006236|POU3F3|5455|POU class 3 homeobox 3##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9	0.863849	CTCF.p2:0:0.864
chrX	55161746	55161890	reg1018491.p1	8.347	+	BC054022 NM_207339	-46322	+	NM_001015038 BC130359	-60302	+	TSC_hg19_v1_chrX_-_55057411 AK291589 X60364 AK313118 NM_000032 NM_001037967 NM_001037968	-104366	-	NM_001166703 TSC_hg19_v1_chrX_-_55187541 AK299935	25726	-	TSC_hg19_v1_chrX_-_55187619 NM_001166702 BC006406 BC000919 BC017571 AK000441 AK311699 NM_001166699 NM_001166700 NM_001166701 NM_001166704 NM_138362	25778	-	NM_001190708	47125	-	BC054022|PAGE2|203569|P antigen family, member 2 (prostate associated)##NM_207339|PAGE2|203569|P antigen family, member 2 (prostate associated)##NM_001015038|PAGE2B|389860|P antigen family, member 2B##BC130359|PAGE2B|389860|P antigen family, member 2B##AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2##X60364|ALAS2|212|aminolevulinate, delta-, synthase 2##AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2##NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2##NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2##NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2##NM_001166703|FAM104B|90736|family with sequence similarity 104, member B##AK299935|FAM104B|90736|family with sequence similarity 104, member B##NM_001166702|FAM104B|90736|family with sequence similarity 104, member B##BC006406|FAM104B|90736|family with sequence similarity 104, member B##BC000919|FAM104B|90736|family with sequence similarity 104, member B##BC017571|FAM104B|90736|family with sequence similarity 104, member B##AK000441|FAM104B|90736|family with sequence similarity 104, member B##AK311699|FAM104B|90736|family with sequence similarity 104, member B##NM_001166699|FAM104B|90736|family with sequence similarity 104, member B##NM_001166700|FAM104B|90736|family with sequence similarity 104, member B##NM_001166701|FAM104B|90736|family with sequence similarity 104, member B##NM_001166704|FAM104B|90736|family with sequence similarity 104, member B##NM_138362|FAM104B|90736|family with sequence similarity 104, member B##NM_001190708|MTRNR2L10|100463488|MT-RNR2-like 10	0.995014	CTCF.p2:-19:0.995
chrX	68042644	68042759	reg1018947.p1	8.347	+	TSC_hg19_v1_chrX_+_67913490 D80011	-129210	+	TSC_hg19_v1_chrX_+_67913480 AK291747 NM_001142504	-129221	+	BC035587 NM_001142503 NM_014725 CR749411	-175142	+	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	6154	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	342605	-	AF087142 NM_015686 BC136518 BC136519	682382	+	D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK291747|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142504|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##BC035587|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142503|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_014725|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##CR749411|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B	0.203711	CTCF.p2:-13:0.204
chr5	175123665	175123804	reg1018953.p1	8.346	+	NM_022304	-15271	+	TSC_hg19_v1_chr5_+_175085101 AB023487	-38623	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	-38696	+	TSC_hg19_v1_chr5_+_175223538 NM_006650 U35100	99830	+	TSC_hg19_v1_chr5_+_175298517 AY576870 NM_001008220 AK124837	174775	+	TSC_hg19_v1_chr5_+_175298551 AK314177	174811	+	NM_022304|HRH2|3274|histamine receptor H2##AB023487|HRH2|3274|histamine receptor H2##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2##NM_006650|CPLX2|10814|complexin 2##U35100|CPLX2|10814|complexin 2##AY576870|CPLX2|10814|complexin 2##NM_001008220|CPLX2|10814|complexin 2##AK124837|CPLX2|10814|complexin 2##AK314177|CPLX2|10814|complexin 2	0.918257	CTCF.p2:9:0.918
chrX	41417907	41418025	reg1014826.p1	8.346	+	AJ278865 AF254868 NM_022567	-111267	+	AK304661 TSC_hg19_v1_chrX_+_41193866 AK127902	-224101	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	-224509	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	130301	+	BC070180 NM_080817 AK122626 AK313702 AL832460	165454	+	AB208859 AB590064 HQ258518 AY705392 AF035582 BC117311 BC143454 BC143456 AF032119 NM_001126054 NM_001126055 NM_003688 AK313399	364359	-	AJ278865|NYX|60506|nyctalopin##AF254868|NYX|60506|nyctalopin##NM_022567|NYX|60506|nyctalopin##AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82##AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	0.0	
chr13	27447155	27447281	reg1014908.p2	8.345	+	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	-112365	-	TSC_hg19_v1_chr13_+_27131892 AF454702	-315316	+	TSC_hg19_v1_chr13_+_27131854 AK289845 BC050283 NM_006646	-315384	+	DQ894074 AF022789 TSC_hg19_v1_chr13_-_27745948 AK289685	298643	-	TSC_hg19_v1_chr13_-_27746003 BC026072 NM_182488	298868	-	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	378524	+	AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12##AF454702|WASF3|10810|WAS protein family, member 3##AK289845|WASF3|10810|WAS protein family, member 3##BC050283|WASF3|10810|WAS protein family, member 3##NM_006646|WASF3|10810|WAS protein family, member 3##DQ894074|USP12|219333|ubiquitin specific peptidase 12##AF022789|USP12|219333|ubiquitin specific peptidase 12##AK289685|USP12|219333|ubiquitin specific peptidase 12##BC026072|USP12|219333|ubiquitin specific peptidase 12##NM_182488|USP12|219333|ubiquitin specific peptidase 12##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21	0.993977	CTCF.p2:-13:0.994
chr5	118324191	118324313	reg1009526.p2	8.345	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	-14	-	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-2413738	-	TSC_hg19_v1_chr5_+_115898220 D28352	-2426028	+	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	82559	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	82913	+	NM_001077654 TSC_hg19_v1_chr5_+_118604492 AK097884 AK001931	280206	+	BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1##NM_001077654|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK097884|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001931|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8	0.932738	CTCF.p2:1:0.933
chr6	126274307	126274428	reg1017266.p1	8.345	+	NM_001199622 TSC_hg19_v1_chr6_+_126240392 AK094706	-33944	+	TSC_hg19_v1_chr6_+_126112105 BC036461 AK127512 AB074157 AK294558 BX537385 AL832621 AL832628 AB074156	-162259	+	TSC_hg19_v1_chr6_+_126111841 NM_001122842 NM_001199621 NM_181782	-162514	+	TSC_hg19_v1_chr6_+_126277915 NM_138571 BX647228 AK309857 BC015732 AK057688 AJ420577 AY035387 AY035388 AY486460 AY486461 DQ892201 DQ895396	3618	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	33235	+	TSC_hg19_v1_chr6_+_126307685 AK308651	33296	+	NM_001199622|NCOA7|135112|nuclear receptor coactivator 7##AK094706|NCOA7|135112|nuclear receptor coactivator 7##BC036461|NCOA7|135112|nuclear receptor coactivator 7##AK127512|NCOA7|135112|nuclear receptor coactivator 7##AB074157|NCOA7|135112|nuclear receptor coactivator 7##AK294558|NCOA7|135112|nuclear receptor coactivator 7##BX537385|NCOA7|135112|nuclear receptor coactivator 7##AL832621|NCOA7|135112|nuclear receptor coactivator 7##AL832628|NCOA7|135112|nuclear receptor coactivator 7##AB074156|NCOA7|135112|nuclear receptor coactivator 7##NM_001122842|NCOA7|135112|nuclear receptor coactivator 7##NM_001199621|NCOA7|135112|nuclear receptor coactivator 7##NM_181782|NCOA7|135112|nuclear receptor coactivator 7##NM_138571|HINT3|135114|histidine triad nucleotide binding protein 3##BX647228|HINT3|135114|histidine triad nucleotide binding protein 3##AK309857|HINT3|135114|histidine triad nucleotide binding protein 3##BC015732|HINT3|135114|histidine triad nucleotide binding protein 3##AK057688|HINT3|135114|histidine triad nucleotide binding protein 3##AJ420577|HINT3|135114|histidine triad nucleotide binding protein 3##AY035387|HINT3|135114|histidine triad nucleotide binding protein 3##AY035388|HINT3|135114|histidine triad nucleotide binding protein 3##AY486460|HINT3|135114|histidine triad nucleotide binding protein 3##AY486461|HINT3|135114|histidine triad nucleotide binding protein 3##DQ892201|HINT3|135114|histidine triad nucleotide binding protein 3##DQ895396|HINT3|135114|histidine triad nucleotide binding protein 3##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)	0.99335	CTCF.p2:4:0.993
chr12	110888203	110888315	reg1015804.p3	8.344	+	TSC_hg19_v1_chr12_-_110888163 AK311789	-90	-	TSC_hg19_v1_chr12_-_110888152 NM_005719	-105	-	TSC_hg19_v1_chr12_-_110888134 AK297309	-117	-	AM992619 AM992620 AY364262 CU678955 CU689082 AB528074 AM393009 AM393821 TSC_hg19_v1_chr12_-_110906038 AF117229	17771	-	TSC_hg19_v1_chr12_-_110906063 AK223209 AK314946 BC008416 BC031024 AY359078 BX537973 NM_001164373 NM_016301	17813	-	TSC_hg19_v1_chr12_+_110906228 AK296280 AK297684 NM_013300 AK225731 U79274 BC020967	18050	+	AK311789|ARPC3|10094|actin related protein 2/3 complex, subunit 3, 21kDa##NM_005719|ARPC3|10094|actin related protein 2/3 complex, subunit 3, 21kDa##AK297309|ARPC3|10094|actin related protein 2/3 complex, subunit 3, 21kDa##AM992619|GPN3|51184|GPN-loop GTPase 3##AM992620|GPN3|51184|GPN-loop GTPase 3##AY364262|GPN3|51184|GPN-loop GTPase 3##AM393009|GPN3|51184|GPN-loop GTPase 3##AM393821|GPN3|51184|GPN-loop GTPase 3##AF117229|GPN3|51184|GPN-loop GTPase 3##AK223209|GPN3|51184|GPN-loop GTPase 3##AK314946|GPN3|51184|GPN-loop GTPase 3##BC008416|GPN3|51184|GPN-loop GTPase 3##BC031024|GPN3|51184|GPN-loop GTPase 3##AY359078|GPN3|51184|GPN-loop GTPase 3##BX537973|GPN3|51184|GPN-loop GTPase 3##NM_001164373|GPN3|51184|GPN-loop GTPase 3##NM_016301|GPN3|51184|GPN-loop GTPase 3##AK296280|C12orf24|29902|chromosome 12 open reading frame 24##AK297684|C12orf24|29902|chromosome 12 open reading frame 24##NM_013300|C12orf24|29902|chromosome 12 open reading frame 24##AK225731|C12orf24|29902|chromosome 12 open reading frame 24##U79274|C12orf24|29902|chromosome 12 open reading frame 24##BC020967|C12orf24|29902|chromosome 12 open reading frame 24	0.012637	
chr13	58199123	58199246	reg1014181.p2	8.343	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	-457789	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	-464354	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	-470925	+	NM_001040429	6604	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	6763	+	TSC_hg19_v1_chr13_+_58207858 AK307545	8712	+	AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##NM_001040429|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##AK307545|PCDH17|27253|protocadherin 17	0.995502	CTCF.p2:-5:0.996
chr19	19164749	19164837	reg1016255.p1	8.343	+	BC067125 TSC_hg19_v1_chr19_+_19144690	-20133	+	TSC_hg19_v1_chr19_+_19144524 BC056161	-20246	+	TSC_hg19_v1_chr19_+_19144418 NM_001199196 NM_033415 BC010051 AK303914 BX648486	-20363	+	TSC_hg19_v1_chr19_+_19174802 NM_178526 BC045598 FN356975	10016	+	TSC_hg19_v1_chr19_-_19249264 AK225424 AK000429 NM_017814	84461	-	TSC_hg19_v1_chr19_-_19249268 BC005210 AK096964	84482	-	BC067125|ARMC6|93436|armadillo repeat containing 6##BC056161|ARMC6|93436|armadillo repeat containing 6##NM_001199196|ARMC6|93436|armadillo repeat containing 6##NM_033415|ARMC6|93436|armadillo repeat containing 6##AK303914|ARMC6|93436|armadillo repeat containing 6##BX648486|ARMC6|93436|armadillo repeat containing 6##NM_178526|SLC25A42|284439|solute carrier family 25, member 42##BC045598|SLC25A42|284439|solute carrier family 25, member 42##FN356975|SLC25A42|284439|solute carrier family 25, member 42##AK225424|TMEM161A|54929|transmembrane protein 161A##AK000429|TMEM161A|54929|transmembrane protein 161A##NM_017814|TMEM161A|54929|transmembrane protein 161A##BC005210|TMEM161A|54929|transmembrane protein 161A##AK096964|TMEM161A|54929|transmembrane protein 161A	0.999663	CTCF.p2:-8:1.000
chr2	25790407	25790539	reg1015426.p2	8.343	+	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	-225011	-	TSC_hg19_v1_chr2_-_25565353 AB208833	-225110	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	-225145	-	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	105928	-	AB385496 TSC_hg19_v1_chr2_-_26101159	310656	-	TSC_hg19_v1_chr2_-_26101174 AB084279	310700	-	BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)	0.99288	CTCF.p2:2:0.993
chr3	25075060	25075165	reg1015358.p1	8.343	+	AY286470 TSC_hg19_v1_chr3_-_24536493	-538635	-	GQ456948 GQ456949 GQ869479 GQ919288 AY286469 AY286468 AY286465 AY286471 TSC_hg19_v1_chr3_-_24536294 AY286467 AY286466 AK096628 M26747 NM_000461 NM_001128176 NM_001128177 NM_001252634 X04707	-538868	-	TSC_hg19_v1_chr3_+_23987516 AK301925 NM_001145425	-1087550	+	TSC_hg19_v1_chr3_+_25469751 AF157483 NM_016152	394647	+	BC030234 NM_000965 TSC_hg19_v1_chr3_+_25469854 X07282 Y00291	394755	+	TSC_hg19_v1_chr3_+_25470068 BC060794 AK292032 AB590663 CU687428 AB307688 HQ692864	395032	+	AY286470|THRB|7068|thyroid hormone receptor, beta##GQ456948|THRB|7068|thyroid hormone receptor, beta##GQ456949|THRB|7068|thyroid hormone receptor, beta##GQ869479|THRB|7068|thyroid hormone receptor, beta##GQ919288|THRB|7068|thyroid hormone receptor, beta##AY286469|THRB|7068|thyroid hormone receptor, beta##AY286468|THRB|7068|thyroid hormone receptor, beta##AY286465|THRB|7068|thyroid hormone receptor, beta##AY286471|THRB|7068|thyroid hormone receptor, beta##AY286467|THRB|7068|thyroid hormone receptor, beta##AY286466|THRB|7068|thyroid hormone receptor, beta##AK096628|THRB|7068|thyroid hormone receptor, beta##M26747|THRB|7068|thyroid hormone receptor, beta##NM_000461|THRB|7068|thyroid hormone receptor, beta##NM_001128176|THRB|7068|thyroid hormone receptor, beta##NM_001128177|THRB|7068|thyroid hormone receptor, beta##NM_001252634|THRB|7068|thyroid hormone receptor, beta##X04707|THRB|7068|thyroid hormone receptor, beta##AK301925|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001145425|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##AF157483|RARB|5915|retinoic acid receptor, beta##NM_016152|RARB|5915|retinoic acid receptor, beta##BC030234|RARB|5915|retinoic acid receptor, beta##NM_000965|RARB|5915|retinoic acid receptor, beta##X07282|RARB|5915|retinoic acid receptor, beta##Y00291|RARB|5915|retinoic acid receptor, beta##BC060794|RARB|5915|retinoic acid receptor, beta##AK292032|RARB|5915|retinoic acid receptor, beta##AB307688|RARB|5915|retinoic acid receptor, beta##HQ692864|RARB|5915|retinoic acid receptor, beta	0.949538	CTCF.p2:0:0.950
chr12	16318510	16318620	reg1016449.p1	8.342	+	TSC_hg19_v1_chr12_+_16064282 AK024614 AK222541 AK296697	-254274	+	TSC_hg19_v1_chr12_+_16064265 BC056234	-254309	+	BC041328 NM_015954 TSC_hg19_v1_chr12_+_16064223	-254399	+	NM_001170798	112053	-	NM_145792	181510	+	TSC_hg19_v1_chr12_+_16500585 BC062473 NM_020300 AK291148 AK309707 BC005923 BC056863 NM_145791	182054	+	AK024614|DERA|51071|deoxyribose-phosphate aldolase (putative)##AK222541|DERA|51071|deoxyribose-phosphate aldolase (putative)##AK296697|DERA|51071|deoxyribose-phosphate aldolase (putative)##BC056234|DERA|51071|deoxyribose-phosphate aldolase (putative)##BC041328|DERA|51071|deoxyribose-phosphate aldolase (putative)##NM_015954|DERA|51071|deoxyribose-phosphate aldolase (putative)##NM_001170798|SLC15A5|729025|solute carrier family 15, member 5##NM_145792|MGST1|4257|microsomal glutathione S-transferase 1##NM_020300|MGST1|4257|microsomal glutathione S-transferase 1##AK291148|MGST1|4257|microsomal glutathione S-transferase 1##AK309707|MGST1|4257|microsomal glutathione S-transferase 1##BC005923|MGST1|4257|microsomal glutathione S-transferase 1##BC056863|MGST1|4257|microsomal glutathione S-transferase 1##NM_145791|MGST1|4257|microsomal glutathione S-transferase 1	0.022253	
chr5	147862553	147862651	reg1015601.p2	8.342	+	TSC_hg19_v1_chr5_+_147795459 BC005849 BC005873 AL832841	-67077	+	BC050424 TSC_hg19_v1_chr5_+_147774324 AB385244 CU689628	-88296	+	TSC_hg19_v1_chr5_+_147763577 BC033454 AK024024	-99025	+	AJ633645 AM712912 Y10437 Y13584 AJ011371 BC095497 Y09586 AJ131725 AJ131726 AJ278979 AJ278980 AJ278981 AJ278982 Y08756 Y12505 Y12506 Y12507 AJ519673 BC074755 NM_001040169 NM_001040172 NM_001040173 NM_199453	153997	-	AJ131724 TSC_hg19_v1_chr5_-_148033739 NM_000870	171125	-	AK308471 TSC_hg19_v1_chr5_-_148034091	171488	-	BC005849|FBXO38|81545|F-box protein 38##BC005873|FBXO38|81545|F-box protein 38##AL832841|FBXO38|81545|F-box protein 38##BC050424|FBXO38|81545|F-box protein 38##BC033454|FBXO38|81545|F-box protein 38##AK024024|FBXO38|81545|F-box protein 38##AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131724|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000870|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	0.996009	CTCF.p2:0:0.996
chr9	139990183	139990326	reg1015868.p1	8.342	+	TSC_hg19_v1_chr9_+_139981532 AK299043 AK298480 AK309808 CR749534	-8725	+	AK315797 BC006079 TSC_hg19_v1_chr9_+_139981436 BC002953 CU675227 DQ891861 DQ895050 AF145732	-8806	+	TSC_hg19_v1_chr9_+_139981431 AY358465	-8826	+	AK298288 TSC_hg19_v1_chr9_-_140008972	18731	-	TSC_hg19_v1_chr9_-_140009160 AB209787	18905	-	TSC_hg19_v1_chr9_-_140009166 AF154502	18910	-	AK299043|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AK298480|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AK309808|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##CR749534|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AK315797|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##BC006079|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##BC002953|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##DQ891861|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##DQ895050|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AF145732|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AY358465|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AK298288|DPP7|29952|dipeptidyl-peptidase 7##AB209787|DPP7|29952|dipeptidyl-peptidase 7##AF154502|DPP7|29952|dipeptidyl-peptidase 7	0.582275	CTCF.p2:-2:0.582
chr19	48216496	48216635	reg1018576.p1	8.341	+	TSC_hg19_v1_chr19_+_48111441 BC032065 NM_015711	-105121	+	NM_001101419	-157453	-	TSC_hg19_v1_chr19_-_48018321 BC028234 AK098401 NM_003827	-198150	-	NM_014601 TSC_hg19_v1_chr19_+_48216678 AK315548 AK074701 AK097126 AK097228 AK296907 AK298067 BC014445	85	+	NM_015710 TSC_hg19_v1_chr19_+_48248797	32229	+	TSC_hg19_v1_chr19_+_48248802 AK303180 AK297877 AK303918 AK309788 AK301117 AF182076 BC006311 BC013203 AY535000 CU679611 DQ892724 DQ895973 AK024486 BC013235 BC013307 BC014009 BC039869 BC007248 BC004229 AF296124 AL359336 AL359335	32270	+	BC032065|GLTSCR1|29998|glioma tumor suppressor candidate region gene 1##NM_015711|GLTSCR1|29998|glioma tumor suppressor candidate region gene 1##NM_001101419|ZNF541|84215|zinc finger protein 541##BC028234|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##AK098401|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##NM_003827|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##NM_014601|EHD2|30846|EH-domain containing 2##AK315548|EHD2|30846|EH-domain containing 2##AK074701|EHD2|30846|EH-domain containing 2##AK097126|EHD2|30846|EH-domain containing 2##AK097228|EHD2|30846|EH-domain containing 2##AK296907|EHD2|30846|EH-domain containing 2##AK298067|EHD2|30846|EH-domain containing 2##BC014445|EHD2|30846|EH-domain containing 2##NM_015710|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK297877|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK303918|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK309788|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK301117|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF182076|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC006311|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013203|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AY535000|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ892724|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ895973|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK024486|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013235|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013307|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC014009|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC039869|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC007248|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC004229|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF296124|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359336|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359335|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2	0.996384	CTCF.p2:9:0.996
chr5	40736527	40736640	reg1015245.p2	8.341	+	TSC_hg19_v1_chr5_+_40680042 L25124	-56539	+	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	-56556	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-1311266	-	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	19457	-	AF100763 CU691476 TSC_hg19_v1_chr5_-_40798280 BC012622 AK312947 AK307546 BC037303 AB022017 CU690594 NM_006251 NM_206907	61696	-	BC048980 TSC_hg19_v1_chr5_-_40798478	61919	-	L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33##AF100763|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##BC012622|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##AK312947|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##AK307546|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##BC037303|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##AB022017|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##NM_006251|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##NM_206907|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit##BC048980|PRKAA1|5562|protein kinase, AMP-activated, alpha 1 catalytic subunit	0.961647	CTCF.p2:0:0.962
chr2	55998883	55999013	reg1018269.p1	8.340	+	TSC_hg19_v1_chr2_-_55920980 BC053660 BC009057 AK027437 AY027528 AK307589 AJ458465 NM_033109	-77970	-	TSC_hg19_v1_chr2_-_55846016 AK056503	-152930	-	TSC_hg19_v1_chr2_-_55844909 BC045714	-154037	-	TSC_hg19_v1_chr2_-_56150918 AK301531 BC014410 BC098561 AK301402 AK312639 AK092854 AK290599 AX747769	151967	-	AK293058 NM_001039348 NM_001039349	152337	-	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	412257	+	BC053660|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##BC009057|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AY027528|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AK307589|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AJ458465|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##NM_033109|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AK056503|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##BC045714|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##AK301531|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC014410|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC098561|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301402|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK312639|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK092854|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK290599|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A	0.221194	CTCF.p2:0:0.221
chr10	82359271	82359399	reg1016030.p1	8.339	+	AK123978 NM_001145719	-58761	+	AK123885 NM_207372	-61678	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-145231	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	1275747	+	DQ857894 NM_001165973	1278107	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3539922	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.313173	CTCF.p2:16:0.217
chr1	118847721	118847833	reg1015839.p1	8.339	+	AB527095 AK091816 AX747199 AY555274 BX648110 NM_206996	-119964	-	TSC_hg19_v1_chr1_+_118472364 NM_006784 AK292438 AF083217 BC128385 BC128454 BC148244	-375399	+	BC058836 TSC_hg19_v1_chr1_+_118472357	-375424	+	AK127536 NM_152380	684401	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	835249	+	TSC_hg19_v1_chr1_-_119683274 BC021722 CU692202 BC039889 AK223197 AJ242739 AK296799 BC044575 AK313740 AK300295 NM_015836 NM_201263	835492	-	AK091816|SPAG17|200162|sperm associated antigen 17##AY555274|SPAG17|200162|sperm associated antigen 17##BX648110|SPAG17|200162|sperm associated antigen 17##NM_206996|SPAG17|200162|sperm associated antigen 17##NM_006784|WDR3|10885|WD repeat domain 3##AK292438|WDR3|10885|WD repeat domain 3##AF083217|WDR3|10885|WD repeat domain 3##BC058836|WDR3|10885|WD repeat domain 3##AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15##BC021722|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC039889|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK223197|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AJ242739|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK296799|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC044575|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK313740|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK300295|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_015836|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_201263|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial	0.0	
chr2	101629238	101629386	reg1017862.p1	8.339	+	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	-10590	+	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	-192546	+	TSC_hg19_v1_chr2_+_101179454 NM_024065 BC001021 AK300827 AF110511 AF267853	-449876	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	138471	-	TSC_hg19_v1_chr2_+_101869347 NM_017546	240025	+	TSC_hg19_v1_chr2_+_101869378 AF103798 BC064421 BC018664	240080	+	NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_024065|PDCL3|79031|phosducin-like 3##BC001021|PDCL3|79031|phosducin-like 3##AK300827|PDCL3|79031|phosducin-like 3##AF110511|PDCL3|79031|phosducin-like 3##AF267853|PDCL3|79031|phosducin-like 3##AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_017546|C2orf29|55571|chromosome 2 open reading frame 29##AF103798|C2orf29|55571|chromosome 2 open reading frame 29##BC064421|C2orf29|55571|chromosome 2 open reading frame 29##BC018664|C2orf29|55571|chromosome 2 open reading frame 29	0.998097	CTCF.p2:-10:0.998
chr2	160966608	160966706	reg1010893.p1	8.339	+	U17033 U17034 NM_001007267 NM_001195641 NM_007366 TSC_hg19_v1_chr2_-_160919148	-47522	-	BC140823 BC144631 TSC_hg19_v1_chr2_-_160919021	-47678	-	NM_001198759 NM_001198760 NM_002349 TSC_hg19_v1_chr2_-_160761270	-205367	-	AB463075 AM393800 M35198 NM_000888 BC121178 BC143656	89930	-	AK304203 AL831998 TSC_hg19_v1_chr2_-_161056784 AK290300 AK313944	90138	-	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	163532	-	U17033|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##U17034|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001007267|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001195641|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_007366|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC140823|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC144631|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001198759|LY75-CD302|100526664|LY75-CD302 readthrough##NM_001198760|LY75-CD302|100526664|LY75-CD302 readthrough##NM_002349|LY75|4065|lymphocyte antigen 75##AM393800|ITGB6|3694|integrin, beta 6##M35198|ITGB6|3694|integrin, beta 6##NM_000888|ITGB6|3694|integrin, beta 6##BC121178|ITGB6|3694|integrin, beta 6##BC143656|ITGB6|3694|integrin, beta 6##AK304203|ITGB6|3694|integrin, beta 6##AL831998|ITGB6|3694|integrin, beta 6##AK290300|ITGB6|3694|integrin, beta 6##AK313944|ITGB6|3694|integrin, beta 6##BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	0.965203	CTCF.p2:-12:0.965
chr3	176768690	176768808	reg1015857.p1	8.339	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	-2191659	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	-2610029	+	BC032555 NM_014932	-3652506	+	TSC_hg19_v1_chr3_-_176914267 BX648935	145501	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	146202	-	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	146310	-	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.725706	CTCF.p2:-13:0.726
chr1	12091430	12091555	reg1016106.p2	8.338	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-11922	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-11958	+	FJ618905 NM_021933	-12194	+	M83554 NM_001243 BC136400 BC171762 S75768	32052	+	D86042 BC063482 NM_152942 BC073839 BC141804	94524	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	135569	+	AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.935877	CTCF.p2:5:0.936
chr1	37041806	37041931	reg1015037.p2	8.338	+	NM_000760 NM_156039 NM_172313	-92954	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-93384	-	TSC_hg19_v1_chr1_-_36929984 AB049946 AB209905 AK021626 BC031336 AF265439 AK315441 AK302633 NM_031280	-111909	-	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	457907	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	898229	+	TSC_hg19_v1_chr1_+_37940140 AK026884	898282	+	NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AB049946|MRPS15|64960|mitochondrial ribosomal protein S15##AB209905|MRPS15|64960|mitochondrial ribosomal protein S15##AK021626|MRPS15|64960|mitochondrial ribosomal protein S15##BC031336|MRPS15|64960|mitochondrial ribosomal protein S15##AF265439|MRPS15|64960|mitochondrial ribosomal protein S15##AK315441|MRPS15|64960|mitochondrial ribosomal protein S15##AK302633|MRPS15|64960|mitochondrial ribosomal protein S15##NM_031280|MRPS15|64960|mitochondrial ribosomal protein S15##AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.99828	CTCF.p2:-18:0.998
chr17	31847591	31847684	reg1012570.p1	8.338	+	AL834182 NM_183377	-227632	-	AF216311 NM_173847 BC100886 BC100887	-528735	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-592434	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	636050	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	734694	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	749636	+	AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7	0.988687	CTCF.p2:-3:0.989
chr21	38955001	38955131	reg1019043.p1	8.338	+	NM_130438 NM_001396 U52373 D85759 U58496	-162446	+	D86550 NM_130436	-163860	+	AF108830 NM_101395 AB015283 AB015284	-215196	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	333645	-	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	538335	-	BC013327 NM_002243	673597	+	NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.298153	CTCF.p2:0:0.298
chr4	6078269	6078375	reg1016747.p1	8.338	+	DQ206871 TSC_hg19_v1_chr4_-_5894794 NM_001014809	-183578	-	BC009987 TSC_hg19_v1_chr4_-_5891940	-186394	-	TSC_hg19_v1_chr4_-_5890302 NM_001313	-188013	-	TSC_hg19_v1_chr4_-_6202277 AK294356 AK307983 AK056126 AM412307 AM412308 AM412309 AM412310 BC026343 NM_001099433 NM_144720	123962	-	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	193246	+	Y18064 TSC_hg19_v1_chr4_+_6271588	193272	+	DQ206871|CRMP1|1400|collapsin response mediator protein 1##NM_001014809|CRMP1|1400|collapsin response mediator protein 1##BC009987|CRMP1|1400|collapsin response mediator protein 1##NM_001313|CRMP1|1400|collapsin response mediator protein 1##AK294356|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK307983|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK056126|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412307|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412308|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412309|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412310|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##BC026343|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_001099433|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_144720|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)	0.969872	CTCF.p2:-8:0.970
chr5	127082586	127082694	reg1017159.p1	8.338	+	NM_001127385 AB219832 BC071790	-93915	+	NM_001048252 AB219764	-97917	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	-223446	+	TSC_hg19_v1_chr5_-_127418765 AF088062 BX648677 BC036629	336123	-	AK090949 AX746698 TSC_hg19_v1_chr5_-_127419417	336719	-	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	336833	+	NM_001127385|CTXN3|613212|cortexin 3##AB219832|CTXN3|613212|cortexin 3##BC071790|CTXN3|613212|cortexin 3##NM_001048252|CTXN3|613212|cortexin 3##AB219764|CTXN3|613212|cortexin 3##AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1##AF088062|FLJ33630|644873|uncharacterized LOC644873##BX648677|FLJ33630|644873|uncharacterized LOC644873##BC036629|FLJ33630|644873|uncharacterized LOC644873##AK090949|FLJ33630|644873|uncharacterized LOC644873##AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2	0.993458	CTCF.p2:3:0.993
chr10	54068083	54068188	reg1015187.p1	8.337	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-608788	-	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-1233844	+	TSC_hg19_v1_chr10_+_52751129 D45864	-1317014	+	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	5980	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	463291	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2492863	-	AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##D45864|PRKG1|5592|protein kinase, cGMP-dependent, type I##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15	0.928571	CTCF.p2:-10:0.929
chr10	90977556	90977668	reg1015141.p3	8.337	+	CU687230 DQ892026 DQ895218 BC072430 AF059214 BC017843 NM_003956 AK314865	-10552	-	AK311424 TSC_hg19_v1_chr10_+_90751184 AK311164 AK311499	-226491	+	TSC_hg19_v1_chr10_-_90751090 AY692464 NM_001141945	-226562	-	U08464 Z31690 TSC_hg19_v1_chr10_-_91011533 AK222760 AK290241 AK297079 AK314665 M74775	33918	-	AK130882 TSC_hg19_v1_chr10_-_91011565	33955	-	TSC_hg19_v1_chr10_-_91011616 BC012287 X76488 NM_000235 NM_001127605	34010	-	DQ892026|CH25H|9023|cholesterol 25-hydroxylase##DQ895218|CH25H|9023|cholesterol 25-hydroxylase##BC072430|CH25H|9023|cholesterol 25-hydroxylase##AF059214|CH25H|9023|cholesterol 25-hydroxylase##BC017843|CH25H|9023|cholesterol 25-hydroxylase##NM_003956|CH25H|9023|cholesterol 25-hydroxylase##AK314865|CH25H|9023|cholesterol 25-hydroxylase##AK311424|FAS|355|Fas (TNF receptor superfamily, member 6)##AK311164|FAS|355|Fas (TNF receptor superfamily, member 6)##AK311499|FAS|355|Fas (TNF receptor superfamily, member 6)##AY692464|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001141945|ACTA2|59|actin, alpha 2, smooth muscle, aorta##U08464|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##Z31690|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK222760|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK290241|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK297079|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK314665|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##M74775|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK130882|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##BC012287|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##X76488|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_000235|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_001127605|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	0.999562	CTCF.p2:12:1.000
chr1	112113460	112113589	reg1017648.p1	8.337	+	BC041707 BC064411 NM_001081976	-6945	-	NM_000677 NM_020683	-66782	-	TSC_hg19_v1_chr1_+_112016601 BC017973 NM_174896	-96926	+	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	48943	+	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	168431	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	184695	+	BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##BC017973|C1orf162|128346|chromosome 1 open reading frame 162##NM_174896|C1orf162|128346|chromosome 1 open reading frame 162##NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	0.0	
chr12	100798691	100798804	reg1014907.p1	8.337	+	AK128319 NM_001145288 NM_139319 AJ459241	-47823	+	TSC_hg19_v1_chr12_+_100661204 AK292980 BC063798 NM_017988	-137372	+	TSC_hg19_v1_chr12_+_100661170 AK125091	-137567	+	AK312959 NM_001206977 NM_001206978 NM_001206979 NM_005123 TSC_hg19_v1_chr12_+_100867643 U68233 BC130573 BC144183 BC144184 BC144187	68874	+	TSC_hg19_v1_chr12_+_100867741 BC035654	68998	+	AF478445 AF478446 NM_001206992 NM_001206993 AK296612 BX571749 AB463943 BC071778 AK296647	98422	+	AK128319|SLC17A8|246213|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8##NM_001145288|SLC17A8|246213|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8##NM_139319|SLC17A8|246213|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8##AJ459241|SLC17A8|246213|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8##AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##AK125091|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##AK312959|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206977|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206978|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206979|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_005123|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##U68233|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC130573|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC144183|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC144184|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC144187|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC035654|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AF478445|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AF478446|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206992|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206993|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AK296612|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BX571749|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC071778|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AK296647|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4	0.185651	
chr2	37007502	37007659	reg1018244.p1	8.337	+	TSC_hg19_v1_chr2_+_36923944 BC061519 AK056772 AK292149 AY358338 AL832679 AF063833 BC128260	-83620	+	NM_001177969 NM_001177970 NM_001177971 NM_001177972 NM_053276 AK299426 TSC_hg19_v1_chr2_+_36923849	-83734	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	-182298	-	TSC_hg19_v1_chr2_-_37076016 BC015406	68450	-	AB590635 BC106879 AJ223814 BC106878 NM_003162 TSC_hg19_v1_chr2_-_37193662	186055	-	TSC_hg19_v1_chr2_-_37297372 BX538008	289864	-	BC061519|VIT|5212|vitrin##AK056772|VIT|5212|vitrin##AK292149|VIT|5212|vitrin##AY358338|VIT|5212|vitrin##AL832679|VIT|5212|vitrin##AF063833|VIT|5212|vitrin##BC128260|VIT|5212|vitrin##NM_001177969|VIT|5212|vitrin##NM_001177970|VIT|5212|vitrin##NM_001177971|VIT|5212|vitrin##NM_001177972|VIT|5212|vitrin##NM_053276|VIT|5212|vitrin##AK299426|VIT|5212|vitrin##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC015406|STRN|6801|striatin, calmodulin binding protein##BC106879|STRN|6801|striatin, calmodulin binding protein##AJ223814|STRN|6801|striatin, calmodulin binding protein##BC106878|STRN|6801|striatin, calmodulin binding protein##NM_003162|STRN|6801|striatin, calmodulin binding protein##BX538008|HEATR5B|54497|HEAT repeat containing 5B	0.995883	CTCF.p2:-18:0.996
chr1	150785700	150785818	reg1016203.p2	8.336	+	U20280 AY429530 AK312880 AK130134 TSC_hg19_v1_chr1_-_150780787 U13665 AK308229 BC016058 NM_000396	-4949	-	TSC_hg19_v1_chr1_-_150738295 AK226095 M90696 NM_001199739 NM_004079	-47397	-	TSC_hg19_v1_chr1_-_150738255 AK301472 AK314482	-47491	-	AK304772 CU687456 AB385121 TSC_hg19_v1_chr1_-_150849057 AB209877 BC041121	63293	-	TSC_hg19_v1_chr1_-_150849073 AK315812 AK291705 AF001307 M69238 AK223459	63327	-	TSC_hg19_v1_chr1_-_150849187 BC060838 AK290177 AL834279 AK313780	63418	-	U20280|CTSK|1513|cathepsin K##AY429530|CTSK|1513|cathepsin K##AK312880|CTSK|1513|cathepsin K##AK130134|CTSK|1513|cathepsin K##U13665|CTSK|1513|cathepsin K##AK308229|CTSK|1513|cathepsin K##BC016058|CTSK|1513|cathepsin K##NM_000396|CTSK|1513|cathepsin K##AK226095|CTSS|1520|cathepsin S##M90696|CTSS|1520|cathepsin S##NM_001199739|CTSS|1520|cathepsin S##NM_004079|CTSS|1520|cathepsin S##AK301472|CTSS|1520|cathepsin S##AK314482|CTSS|1520|cathepsin S##AK304772|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AB209877|ARNT|405|aryl hydrocarbon receptor nuclear translocator##BC041121|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AK315812|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AK291705|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AF001307|ARNT|405|aryl hydrocarbon receptor nuclear translocator##M69238|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AK223459|ARNT|405|aryl hydrocarbon receptor nuclear translocator##BC060838|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AK290177|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AL834279|ARNT|405|aryl hydrocarbon receptor nuclear translocator##AK313780|ARNT|405|aryl hydrocarbon receptor nuclear translocator	0.135581	
chr13	68878569	68878706	reg1017189.p1	8.336	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-1074133	-	AK289924 NM_022843	-6888983	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-6889384	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	1803904	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	3561622	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	3562126	-	BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)	0.725755	CTCF.p2:-16:0.726
chr17	55087481	55087608	reg1016304.p1	8.336	+	NM_021626 TSC_hg19_v1_chr17_+_55055513 AY358559 AF282618 AK027373 BC010078 AK298161 CU687218 BC072405 AF113214	-32040	+	CU679689 DQ892927 DQ896176 TSC_hg19_v1_chr17_-_55038404 AK313616 U06632 BC010385 NM_004645	-49143	-	TSC_hg19_v1_chr17_-_54991410 NM_005082	-96139	-	TSC_hg19_v1_chr17_+_55162639 NM_003488 BC000729 X97335	75070	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	75599	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	246429	+	NM_021626|SCPEP1|59342|serine carboxypeptidase 1##AY358559|SCPEP1|59342|serine carboxypeptidase 1##AF282618|SCPEP1|59342|serine carboxypeptidase 1##AK027373|SCPEP1|59342|serine carboxypeptidase 1##BC010078|SCPEP1|59342|serine carboxypeptidase 1##AK298161|SCPEP1|59342|serine carboxypeptidase 1##BC072405|SCPEP1|59342|serine carboxypeptidase 1##AF113214|SCPEP1|59342|serine carboxypeptidase 1##DQ892927|COIL|8161|coilin##DQ896176|COIL|8161|coilin##AK313616|COIL|8161|coilin##U06632|COIL|8161|coilin##BC010385|COIL|8161|coilin##NM_004645|COIL|8161|coilin##NM_005082|TRIM25|7706|tripartite motif containing 25##NM_003488|AKAP1|8165|A kinase (PRKA) anchor protein 1##BC000729|AKAP1|8165|A kinase (PRKA) anchor protein 1##X97335|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)	0.0	
chr1	111764703	111764865	reg1002351.p3	8.335	+	TSC_hg19_v1_chr1_-_111747005 AK026110	-17809	-	TSC_hg19_v1_chr1_-_111743297 AK301583	-21474	-	TSC_hg19_v1_chr1_-_111743272 BC004557 NM_024901	-21514	-	NM_001025197 NM_004000 U58514 U49835 BC011460 BT006767 DQ893705 CU679936	5532	+	NM_001025199 U58515 AK298466 AK223316	7608	+	AK290702 AB025008 AB025009 AY825504 NM_021797 AF290004 AY789444 NM_201653	68721	+	AK026110|DENND2D|79961|DENN/MADD domain containing 2D##AK301583|DENND2D|79961|DENN/MADD domain containing 2D##BC004557|DENND2D|79961|DENN/MADD domain containing 2D##NM_024901|DENND2D|79961|DENN/MADD domain containing 2D##NM_001025197|CHI3L2|1117|chitinase 3-like 2##NM_004000|CHI3L2|1117|chitinase 3-like 2##U58514|CHI3L2|1117|chitinase 3-like 2##U49835|CHI3L2|1117|chitinase 3-like 2##BC011460|CHI3L2|1117|chitinase 3-like 2##BT006767|CHI3L2|1117|chitinase 3-like 2##DQ893705|CHI3L2|1117|chitinase 3-like 2##NM_001025199|CHI3L2|1117|chitinase 3-like 2##U58515|CHI3L2|1117|chitinase 3-like 2##AK298466|CHI3L2|1117|chitinase 3-like 2##AK223316|CHI3L2|1117|chitinase 3-like 2##AK290702|CHIA|27159|chitinase, acidic##AB025008|CHIA|27159|chitinase, acidic##AB025009|CHIA|27159|chitinase, acidic##AY825504|CHIA|27159|chitinase, acidic##NM_021797|CHIA|27159|chitinase, acidic##AF290004|CHIA|27159|chitinase, acidic##AY789444|CHIA|27159|chitinase, acidic##NM_201653|CHIA|27159|chitinase, acidic	0.0	
chr2	175613733	175613851	reg1014469.p1	8.335	+	TSC_hg19_v1_chr2_+_175584527 DQ895855	-29214	+	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	-66038	-	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	-114495	-	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	15377	-	AK055060 NM_001206602	98518	-	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	256221	-	DQ895855|H3F3A|3020|H3 histone, family 3A##BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1##AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1	0.738542	CTCF.p2:-3:0.739
chr9	125215563	125215669	reg1015083.p1	8.335	+	AK304403 TSC_hg19_v1_chr9_+_125137614	-78009	+	TSC_hg19_v1_chr9_+_125133330 AK290022 M59979 AB590429 DQ180740 DQ180741 DQ180742 S36219 S36271 S78220	-82274	+	NM_000962 NM_080591 TSC_hg19_v1_chr9_+_125133302 BC029840	-82345	+	NM_001004451 AB529234 BC136933 BC136938	24603	-	AB528201 NM_054107	57464	+	AB529305 NM_001004452 BC131606	65803	+	AK304403|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##AK290022|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##M59979|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##DQ180740|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##DQ180741|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##DQ180742|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##S36219|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##S36271|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##S78220|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##NM_000962|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##NM_080591|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##BC029840|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##NM_001004451|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1##BC136933|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1##BC136938|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1##NM_054107|OR1J2|26740|olfactory receptor, family 1, subfamily J, member 2##NM_001004452|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4##BC131606|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4	0.415114	CTCF.p2:13:0.415
chr14	82032395	82032506	reg1015420.p1	8.334	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-32223	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-32302	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-167624	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	3964023	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	3964091	+	TSC_hg19_v1_chr14_+_85999692 AK297248	3967135	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.944385	CTCF.p2:-9:0.944
chr19	8067377	8067501	reg1015708.p2	8.334	+	TSC_hg19_v1_chr19_-_8008615 AK289634 NM_006351	-58783	-	AF026030 BC000679 AB590328 CU689670 BC033628 TSC_hg19_v1_chr19_-_8008548 DQ891301 DQ894486 AK223062 AK309415 AF041254	-58887	-	TSC_hg19_v1_chr19_-_7991004 BC062702 AK098834 NM_206833	-76423	-	TSC_hg19_v1_chr19_-_8070526 U38175 BC003376 NM_001419	3086	-	AK292662 NM_001201359 NM_005624	50206	+	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	50508	+	AK289634|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##NM_006351|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AF026030|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##BC033628|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##DQ891301|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##DQ894486|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK223062|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK309415|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AF041254|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##BC062702|CTXN1|404217|cortexin 1##AK098834|CTXN1|404217|cortexin 1##NM_206833|CTXN1|404217|cortexin 1##U38175|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##BC003376|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##NM_001419|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##AK292662|CCL25|6370|chemokine (C-C motif) ligand 25##NM_001201359|CCL25|6370|chemokine (C-C motif) ligand 25##NM_005624|CCL25|6370|chemokine (C-C motif) ligand 25##BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25	0.810545	CTCF.p2:7:0.772
chr2	44471320	44471433	reg1016995.p1	8.334	+	TSC_hg19_v1_chr2_+_44396066 AL833035	-75266	+	TSC_hg19_v1_chr2_+_44396013 NM_001033556 NM_001033557 NM_002706 NM_177968 NM_177969 AK056009 AK291214 DQ023508 DQ023509 DQ023510 DQ023511 BC064381 AJ271832 AJ271835 BC012002	-75361	+	TSC_hg19_v1_chr2_-_44223145 BC130285 AY289212 NM_133259	-248237	-	NM_000341 BC022386 AK309145 AK313157 AB033549 AK091932 AK289636 L11696 M95548 AK223146 BC093624 BC093626 D82326 CU692594 DQ892031 DQ895222 DQ023513 DQ023515 DQ023516 DQ023517	31259	+	BC143061 BC143062 DQ023506 DQ023507 NM_001042385 NM_001042386	115494	-	DQ023503 DQ023504 DQ023505 NM_006036	116436	-	AL833035|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_001033556|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_001033557|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_002706|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177968|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177969|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK056009|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK291214|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023508|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023509|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023510|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023511|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC064381|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271832|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271835|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC012002|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC130285|LRPPRC|10128|leucine-rich PPR-motif containing##AY289212|LRPPRC|10128|leucine-rich PPR-motif containing##NM_133259|LRPPRC|10128|leucine-rich PPR-motif containing##NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC143061|PREPL|9581|prolyl endopeptidase-like##BC143062|PREPL|9581|prolyl endopeptidase-like##DQ023506|PREPL|9581|prolyl endopeptidase-like##DQ023507|PREPL|9581|prolyl endopeptidase-like##NM_001042385|PREPL|9581|prolyl endopeptidase-like##NM_001042386|PREPL|9581|prolyl endopeptidase-like##DQ023503|PREPL|9581|prolyl endopeptidase-like##DQ023504|PREPL|9581|prolyl endopeptidase-like##DQ023505|PREPL|9581|prolyl endopeptidase-like##NM_006036|PREPL|9581|prolyl endopeptidase-like	0.999253	CTCF.p2:-10:0.999
chrX	36885341	36885474	reg1016103.p1	8.334	+	NM_001098843	-631357	+	AK093920 AX748365 NM_173695	-820355	+	NM_152632 AK126295 BC027936 CU693328	-947525	+	NM_001013736	141024	+	NM_000950 NM_001142395 NM_001173486 BC030786 TSC_hg19_v1_chrX_+_37208616 BC012608 NM_001173489 NM_001173490 AK312904 BC060833 AF009242 BC041591	323181	+	AK124915 NM_001170331 NM_198511 TSC_hg19_v1_chrX_+_37430917	545463	+	NM_001098843|CXorf30|645090|chromosome X open reading frame 30##AK093920|CXorf59|286464|chromosome X open reading frame 59##NM_173695|CXorf59|286464|chromosome X open reading frame 59##NM_152632|CXorf22|170063|chromosome X open reading frame 22##AK126295|CXorf22|170063|chromosome X open reading frame 22##BC027936|CXorf22|170063|chromosome X open reading frame 22##NM_001013736|FAM47C|442444|family with sequence similarity 47, member C##NM_000950|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001142395|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173486|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC030786|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC012608|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173489|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173490|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AK312904|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC060833|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AF009242|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC041591|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AK124915|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_001170331|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_198511|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)	0.998199	CTCF.p2:7:0.998
chr16	19570782	19570931	reg1017926.p1	8.333	+	TSC_hg19_v1_chr16_+_19567045 BX537867 AK095078 AK290286 AL832159 BC058845 AL833428 EU831926 EU832021	-3820	+	AK294885 NM_020314	-4120	+	NM_001199022 NM_014711 TSC_hg19_v1_chr16_+_19535277 BC036654 AK300426 AB007879 CR749255 BC030223	-35625	+	TSC_hg19_v1_chr16_+_19727698 AF520569 AF520570 AK000122 NM_153208	156881	+	TSC_hg19_v1_chr16_-_19729532 BC117562 NM_001012991	158631	-	AK295204 AF202640 TSC_hg19_v1_chr16_-_19896168 BC034467 AF181862 NM_016235 AK294680 AK075119 AK315989 AK296754	325308	-	BX537867|C16orf62|57020|chromosome 16 open reading frame 62##AK095078|C16orf62|57020|chromosome 16 open reading frame 62##AK290286|C16orf62|57020|chromosome 16 open reading frame 62##AL832159|C16orf62|57020|chromosome 16 open reading frame 62##BC058845|C16orf62|57020|chromosome 16 open reading frame 62##AL833428|C16orf62|57020|chromosome 16 open reading frame 62##EU831926|C16orf62|57020|chromosome 16 open reading frame 62##EU832021|C16orf62|57020|chromosome 16 open reading frame 62##AK294885|C16orf62|57020|chromosome 16 open reading frame 62##NM_020314|C16orf62|57020|chromosome 16 open reading frame 62##NM_001199022|CCP110|9738|centriolar coiled coil protein 110kDa##NM_014711|CCP110|9738|centriolar coiled coil protein 110kDa##BC036654|CCP110|9738|centriolar coiled coil protein 110kDa##AK300426|CCP110|9738|centriolar coiled coil protein 110kDa##AB007879|CCP110|9738|centriolar coiled coil protein 110kDa##CR749255|CCP110|9738|centriolar coiled coil protein 110kDa##BC030223|CCP110|9738|centriolar coiled coil protein 110kDa##AF520569|IQCK|124152|IQ motif containing K##AF520570|IQCK|124152|IQ motif containing K##AK000122|IQCK|124152|IQ motif containing K##NM_153208|IQCK|124152|IQ motif containing K##BC117562|C16orf88|400506|chromosome 16 open reading frame 88##NM_001012991|C16orf88|400506|chromosome 16 open reading frame 88##AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B	0.900723	CTCF.p2:-6:0.901
chr16	2710936	2711041	reg1015624.p2	8.333	+	AK096394 TSC_hg19_v1_chr16_+_2653445 BC093998 BC111952 AK291606 BC062576 BC036664 BC056242 BC105289 BC080650	-57571	+	BC033494 TSC_hg19_v1_chr16_+_2588066 AB463382 DQ892297 DQ895496 EU832784 GQ129441 CU689632 CR536517 BC040324	-122881	+	AK131060 AK222581 AK293900 TSC_hg19_v1_chr16_+_2588021 AF017995 Y15056	-122953	+	BC063714 TSC_hg19_v1_chr16_-_2723400 AK091794 AX747190 BC043252	12417	-	TSC_hg19_v1_chr16_+_2732524 NM_018992 AK000047	21511	+	TSC_hg19_v1_chr16_+_2732528 BC007314	21603	+	AK096394|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC093998|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC111952|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##AK291606|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC062576|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC036664|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC056242|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC105289|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC080650|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC033494|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##DQ892297|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##DQ895496|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##EU832784|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##GQ129441|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##CR536517|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##BC040324|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK131060|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK222581|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK293900|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AF017995|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##Y15056|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK091794|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##AX747190|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##BC043252|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##NM_018992|KCTD5|54442|potassium channel tetramerisation domain containing 5##AK000047|KCTD5|54442|potassium channel tetramerisation domain containing 5##BC007314|KCTD5|54442|potassium channel tetramerisation domain containing 5	0.830069	CTCF.p2:-2:0.830
chr19	510754	510881	reg1015033.p1	8.333	+	TSC_hg19_v1_chr19_+_507499 AK126170 NM_033513 AK125401 AB463513 BC009520	-3275	+	BC136408 BC137506 BC137507 BC144065 NM_130760 NM_130762 U82483 BC142629 AB590859 AY732484 AY819760 DQ076657 U43628	-14341	+	BC104469 BC104468 AK097378 NM_182577	-35889	-	TSC_hg19_v1_chr19_+_531720 BC018143 AK291554 BC009850 NM_004359	20894	+	TSC_hg19_v1_chr19_+_531759 L22005 BC023979 AB590273 DQ890738 DQ893910 DQ894652 CU676208 BT006659	21017	+	NM_005317 BC025701 HQ257986 AB590860 L23134	33231	+	AK126170|TPGS1|91978|tubulin polyglutamylase complex subunit 1##NM_033513|TPGS1|91978|tubulin polyglutamylase complex subunit 1##BC009520|TPGS1|91978|tubulin polyglutamylase complex subunit 1##BC136408|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC137506|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC137507|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC144065|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##NM_130760|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##NM_130762|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##U82483|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC142629|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##AY732484|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##AY819760|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##DQ076657|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##U43628|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC104469|ODF3L2|284451|outer dense fiber of sperm tails 3-like 2##BC104468|ODF3L2|284451|outer dense fiber of sperm tails 3-like 2##AK097378|ODF3L2|284451|outer dense fiber of sperm tails 3-like 2##NM_182577|ODF3L2|284451|outer dense fiber of sperm tails 3-like 2##BC018143|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##AK291554|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##BC009850|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##NM_004359|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##L22005|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##BC023979|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##DQ890738|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##DQ893910|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##DQ894652|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##BT006659|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##NM_005317|GZMM|3004|granzyme M (lymphocyte met-ase 1)##BC025701|GZMM|3004|granzyme M (lymphocyte met-ase 1)##HQ257986|GZMM|3004|granzyme M (lymphocyte met-ase 1)##L23134|GZMM|3004|granzyme M (lymphocyte met-ase 1)	0.99849	CTCF.p2:-44:0.998
chr5	177662138	177662289	reg1016533.p1	8.333	+	TSC_hg19_v1_chr5_-_177659803 NM_153373	-2395	-	TSC_hg19_v1_chr5_-_177659788 BC039012 BC028002 BC067745 AK292061 BC037567 BC008009 BC088800 BC037238 BC110335	-2439	-	CU691508 TSC_hg19_v1_chr5_-_177659566 AK024076	-2631	-	AY158895 AY898961 NM_173465	355342	-	BC136261 BC143538 BC143547 TSC_hg19_v1_chr5_-_178054030 CR749504 BC065732 AK310427 BC063116 AK294921 BC015942 NM_020666 AK304614 AK311485	391816	-	TSC_hg19_v1_chr5_-_178054072 AK308879 AK309215 BC151233 AK308578	391867	-	NM_153373|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC039012|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC028002|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC067745|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AK292061|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC037567|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC008009|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC088800|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC037238|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC110335|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AK024076|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AY158895|COL23A1|91522|collagen, type XXIII, alpha 1##AY898961|COL23A1|91522|collagen, type XXIII, alpha 1##NM_173465|COL23A1|91522|collagen, type XXIII, alpha 1##BC136261|CLK4|57396|CDC-like kinase 4##BC143538|CLK4|57396|CDC-like kinase 4##BC143547|CLK4|57396|CDC-like kinase 4##CR749504|CLK4|57396|CDC-like kinase 4##BC065732|CLK4|57396|CDC-like kinase 4##AK310427|CLK4|57396|CDC-like kinase 4##BC063116|CLK4|57396|CDC-like kinase 4##BC015942|CLK4|57396|CDC-like kinase 4##NM_020666|CLK4|57396|CDC-like kinase 4##AK304614|CLK4|57396|CDC-like kinase 4##AK311485|CLK4|57396|CDC-like kinase 4##AK308879|CLK4|57396|CDC-like kinase 4##BC151233|CLK4|57396|CDC-like kinase 4	0.981109	CTCF.p2:0:0.981
chr10	80417454	80417566	reg1016989.p1	8.332	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-623879	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-623954	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-628196	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	411278	+	TSC_hg19_v1_chr10_+_80899458 AK025812	481974	+	TSC_hg19_v1_chr10_+_81003207 AB033050	585620	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.975178	CTCF.p2:3:0.975
chr17	79215559	79215664	reg1012955.p1	8.332	+	BC141912 BC127837 NM_001086521 TSC_hg19_v1_chr17_+_79213151 BC079831	-2477	+	TSC_hg19_v1_chr17_-_79212892 NM_144679	-2722	-	TSC_hg19_v1_chr17_-_79212861 AK128728 BC064483 BC042155 AK056090	-2788	-	TSC_hg19_v1_chr17_-_79269071 BC014642	53455	-	TSC_hg19_v1_chr17_-_79269100 NM_001037984 NM_138570	53482	-	AK096111 NM_178520	88862	-	BC127837|C17orf89|284184|chromosome 17 open reading frame 89##NM_001086521|C17orf89|284184|chromosome 17 open reading frame 89##BC079831|C17orf89|284184|chromosome 17 open reading frame 89##NM_144679|C17orf56|146705|chromosome 17 open reading frame 56##AK128728|C17orf56|146705|chromosome 17 open reading frame 56##BC064483|C17orf56|146705|chromosome 17 open reading frame 56##BC042155|C17orf56|146705|chromosome 17 open reading frame 56##AK056090|C17orf56|146705|chromosome 17 open reading frame 56##BC014642|SLC38A10|124565|solute carrier family 38, member 10##NM_001037984|SLC38A10|124565|solute carrier family 38, member 10##NM_138570|SLC38A10|124565|solute carrier family 38, member 10##AK096111|TMEM105|284186|transmembrane protein 105##NM_178520|TMEM105|284186|transmembrane protein 105	0.981135	CTCF.p2:14:0.981
chr1	192415115	192415248	reg1018487.p1	8.331	+	AY643711 NM_001039152	-129060	+	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	-287578	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	-1968446	-	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	129727	+	NM_002927 NM_144766 AF030107 BC016667	190103	+	BC042755 BC044742 NM_002923 TSC_hg19_v1_chr1_+_192778168 AK313668 BC007049 L13463 AY971351 AB528517 AF493926 BT007065 CR457410 CU675517 DQ893178 DQ896478	363003	+	AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1##NM_002927|RGS13|6003|regulator of G-protein signaling 13##NM_144766|RGS13|6003|regulator of G-protein signaling 13##AF030107|RGS13|6003|regulator of G-protein signaling 13##BC016667|RGS13|6003|regulator of G-protein signaling 13##BC042755|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC044742|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002923|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AK313668|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC007049|RGS2|5997|regulator of G-protein signaling 2, 24kDa##L13463|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AY971351|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AF493926|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT007065|RGS2|5997|regulator of G-protein signaling 2, 24kDa##CR457410|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ893178|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ896478|RGS2|5997|regulator of G-protein signaling 2, 24kDa	0.993818	CTCF.p2:-5:0.994
chr1	32173454	32173586	reg1015513.p1	8.331	+	TSC_hg19_v1_chr1_-_32169619 NM_001856	-3827	-	M92642 TSC_hg19_v1_chr1_-_32169608	-3938	-	NM_012392	-62683	-	AB005298 NM_001703	56121	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	90720	-	TSC_hg19_v1_chr1_-_32264318 AK095829	90801	-	NM_001856|COL16A1|1307|collagen, type XVI, alpha 1##M92642|COL16A1|1307|collagen, type XVI, alpha 1##NM_012392|PEF1|553115|penta-EF-hand domain containing 1##AB005298|BAI2|576|brain-specific angiogenesis inhibitor 2##NM_001703|BAI2|576|brain-specific angiogenesis inhibitor 2##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1	0.981178	CTCF.p2:22:0.981
chr14	77111391	77111518	reg1016560.p2	8.331	+	NM_004452	-273765	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-493148	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-493177	+	TSC_hg19_v1_chr14_+_77227817 AK094330	116346	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	117001	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	117598	+	NM_004452|ESRRB|2103|estrogen-related receptor beta##AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1	0.233822	CTCF.p2:2:0.234
chr11	18561901	18562020	reg1016357.p1	8.330	+	AB464330 DQ892792 DQ896039 CU677988 AY207473 AY207474 TSC_hg19_v1_chr11_-_18548471 BC002487 U82130 AK130787 NM_006292	-13528	-	AY581313 BC014340 NM_001144071 NM_144972 AK131523	-84559	+	TSC_hg19_v1_chr11_+_18433884 NM_002301 NM_017448 AY286300 U13680 BC064388 J02938 BC019249 BC090043 AF401094 AF401095 AF401096 AF401097 AK058181	-128073	+	TSC_hg19_v1_chr11_-_18610229 AK295501 BC011011 BC064566 AF503350 AK296835 AK316191 AK301537 NM_001040697 NM_018314 AK314521	48291	-	TSC_hg19_v1_chr11_-_18655915 BC056261 BX641102	93945	-	TSC_hg19_v1_chr11_-_18655926 AK304078 BX648478	93981	-	DQ892792|TSG101|7251|tumor susceptibility gene 101##DQ896039|TSG101|7251|tumor susceptibility gene 101##AY207473|TSG101|7251|tumor susceptibility gene 101##AY207474|TSG101|7251|tumor susceptibility gene 101##BC002487|TSG101|7251|tumor susceptibility gene 101##U82130|TSG101|7251|tumor susceptibility gene 101##AK130787|TSG101|7251|tumor susceptibility gene 101##NM_006292|TSG101|7251|tumor susceptibility gene 101##AY581313|LDHAL6A|160287|lactate dehydrogenase A-like 6A##BC014340|LDHAL6A|160287|lactate dehydrogenase A-like 6A##NM_001144071|LDHAL6A|160287|lactate dehydrogenase A-like 6A##NM_144972|LDHAL6A|160287|lactate dehydrogenase A-like 6A##AK131523|LDHAL6A|160287|lactate dehydrogenase A-like 6A##NM_002301|LDHC|3948|lactate dehydrogenase C##NM_017448|LDHC|3948|lactate dehydrogenase C##AY286300|LDHC|3948|lactate dehydrogenase C##U13680|LDHC|3948|lactate dehydrogenase C##BC064388|LDHC|3948|lactate dehydrogenase C##J02938|LDHC|3948|lactate dehydrogenase C##BC019249|LDHC|3948|lactate dehydrogenase C##BC090043|LDHC|3948|lactate dehydrogenase C##AF401094|LDHC|3948|lactate dehydrogenase C##AF401095|LDHC|3948|lactate dehydrogenase C##AF401096|LDHC|3948|lactate dehydrogenase C##AF401097|LDHC|3948|lactate dehydrogenase C##AK058181|LDHC|3948|lactate dehydrogenase C##AK295501|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##BC011011|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##BC064566|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##AF503350|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##AK296835|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##AK316191|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##AK301537|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##NM_001040697|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##NM_018314|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##AK314521|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##BC056261|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##BX641102|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##AK304078|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##BX648478|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)	0.624857	CTCF.p2:4:0.625
chr4	77965794	77965926	reg1015674.p1	8.330	+	AK124592 CR627457 TSC_hg19_v1_chr4_+_77954068	-11855	+	TSC_hg19_v1_chr4_+_77871005 AK001711 AL110300 AK302700 BC063615 GU727629 AB587498	-94860	+	TSC_hg19_v1_chr4_+_77870908 BC064934	-94948	+	TSC_hg19_v1_chr4_-_77997145 BC000420 BC004975 NM_006835 AB209766 AK301111 AK312632	31292	-	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	112501	+	TSC_hg19_v1_chr4_+_78078398 U47414	112600	+	AK124592|SEPT11|55752|septin 11##AK001711|SEPT11|55752|septin 11##AL110300|SEPT11|55752|septin 11##AK302700|SEPT11|55752|septin 11##BC063615|SEPT11|55752|septin 11##GU727629|SEPT11|55752|septin 11##BC064934|SEPT11|55752|septin 11##BC000420|CCNI|10983|cyclin I##BC004975|CCNI|10983|cyclin I##NM_006835|CCNI|10983|cyclin I##AB209766|CCNI|10983|cyclin I##AK301111|CCNI|10983|cyclin I##AK312632|CCNI|10983|cyclin I##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2	0.9746	CTCF.p2:15:0.975
chr7	131198416	131198529	reg1016809.p1	8.330	+	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-185833	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	-185866	+	AK294384 NM_001145354	-403618	+	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	42891	-	TSC_hg19_v1_chr7_-_131833385 AL834504	634923	-	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	994448	-	BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##AL834504|PLXNA4|91584|plexin A4##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4	0.662943	CTCF.p2:0:0.663
chr2	30338676	30338786	reg1013382.p1	8.329	+	EU788003 EU788004 EU788005 EU788006 EU788007 EU788008 EU788009 EU788010 FJ838786 FJ838787 U62540 TSC_hg19_v1_chr2_-_30144453 AK296218 NM_004304	-194277	-	TSC_hg19_v1_chr2_+_29338370 BC013862 NM_024692 AL834443	-1000376	+	NM_001029883	-1041605	-	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	31039	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	31102	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	31145	+	EU788003|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788004|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788005|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788006|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788007|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788008|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788009|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788010|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838786|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838787|ALK|238|anaplastic lymphoma receptor tyrosine kinase##U62540|ALK|238|anaplastic lymphoma receptor tyrosine kinase##AK296218|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_004304|ALK|238|anaplastic lymphoma receptor tyrosine kinase##BC013862|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_024692|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##AL834443|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)	0.896473	CTCF.p2:8:0.896
chr6	108571811	108571941	reg1016254.p1	8.329	+	NM_003269 AF220532	-84639	+	TSC_hg19_v1_chr6_-_108395940 BC016376 NM_014028	-175937	-	TSC_hg19_v1_chr6_-_108395924 AF533891 AY358795 BC059412 AK129854	-175946	-	BT007114 CR456898 CU677753 EU831975 EU832068 TSC_hg19_v1_chr6_-_108582163 AF062483 AB047360 AF034546	10267	-	TSC_hg19_v1_chr6_-_108582217 BC008444	10318	-	TSC_hg19_v1_chr6_-_108582245 BC015179 BC014580 AK289476	10362	-	NM_003269|NR2E1|7101|nuclear receptor subfamily 2, group E, member 1##AF220532|NR2E1|7101|nuclear receptor subfamily 2, group E, member 1##BC016376|OSTM1|28962|osteopetrosis associated transmembrane protein 1##NM_014028|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AF533891|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AY358795|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC059412|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AK129854|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BT007114|SNX3|8724|sorting nexin 3##CR456898|SNX3|8724|sorting nexin 3##EU831975|SNX3|8724|sorting nexin 3##EU832068|SNX3|8724|sorting nexin 3##AF062483|SNX3|8724|sorting nexin 3##AB047360|SNX3|8724|sorting nexin 3##AF034546|SNX3|8724|sorting nexin 3##BC008444|SNX3|8724|sorting nexin 3##BC015179|SNX3|8724|sorting nexin 3##BC014580|SNX3|8724|sorting nexin 3##AK289476|SNX3|8724|sorting nexin 3	0.0	
chr7	86556124	86556222	reg1014353.p1	8.329	+	X77748 TSC_hg19_v1_chr7_+_86274130 DQ315361 DQ315362 DQ315363	-282057	+	AK294701 TSC_hg19_v1_chr7_+_86274004 BC022496	-282182	+	AK291406 TSC_hg19_v1_chr7_+_86273870	-282302	+	AK296250 NM_152748	39073	-	TSC_hg19_v1_chr7_-_86688965 NM_001142749	132805	-	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	225540	+	X77748|GRM3|2913|glutamate receptor, metabotropic 3##DQ315361|GRM3|2913|glutamate receptor, metabotropic 3##DQ315362|GRM3|2913|glutamate receptor, metabotropic 3##DQ315363|GRM3|2913|glutamate receptor, metabotropic 3##AK294701|GRM3|2913|glutamate receptor, metabotropic 3##BC022496|GRM3|2913|glutamate receptor, metabotropic 3##AK291406|GRM3|2913|glutamate receptor, metabotropic 3##AK296250|KIAA1324L|222223|KIAA1324-like##NM_152748|KIAA1324L|222223|KIAA1324-like##NM_001142749|KIAA1324L|222223|KIAA1324-like##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1	0.970968	CTCF.p2:-14:0.971
chr14	66426104	66426242	reg1018037.p1	8.328	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-546448	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-546685	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-546847	-	AB037806 AF272663 NM_001024218 NM_020806	547951	+	TSC_hg19_v1_chr14_+_66974859 AK025169	548680	+	TSC_hg19_v1_chr14_+_66974870 AK315569	548696	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.999029	CTCF.p2:10:0.999
chr6	27863373	27863502	reg1015787.p2	8.328	+	BX647290 NM_003527 BC106720 EU446972	-2220	+	CU689524 AB590325 DQ891187 DQ894370 BC071668 TSC_hg19_v1_chr6_-_27860964 AK312224 NM_003514	-2491	-	AB463735 NM_003535	-4868	-	BC136881 BC136901 NM_033057	16736	-	BC109251 BC110457 NM_012367	61581	+	NM_003447	185044	+	NM_003527|HIST1H2BO|8348|histone cluster 1, H2bo##BC106720|HIST1H2BO|8348|histone cluster 1, H2bo##EU446972|HIST1H2BO|8348|histone cluster 1, H2bo##DQ891187|HIST1H2AM|8336|histone cluster 1, H2am##DQ894370|HIST1H2AM|8336|histone cluster 1, H2am##NM_003514|HIST1H2AM|8336|histone cluster 1, H2am##NM_003535|HIST1H3J|8356|histone cluster 1, H3j##BC136881|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2##BC136901|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2##NM_033057|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2##BC109251|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##BC110457|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##NM_012367|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##NM_003447|ZNF165|7718|zinc finger protein 165	0.99814	CTCF.p2:27:0.998
chrX	82890375	82890498	reg1015872.p2	8.328	+	AK314967 NM_000307 TSC_hg19_v1_chrX_+_82763302 X82324 AB464667	-127137	+	TSC_hg19_v1_chrX_+_80457600 BC016709 AL136718 AK129610 AF042081 AK310011 AB590910 CR533478	-2432788	+	TSC_hg19_v1_chrX_+_80457572 AK309351	-2432860	+	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	225735	+	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	552536	-	BC101720 BC101722 BC143522 BX538112 AK055240 AK290050 BX649166 NM_001177478 NM_001177479 NM_144657	867006	-	AK314967|POU3F4|5456|POU class 3 homeobox 4##NM_000307|POU3F4|5456|POU class 3 homeobox 4##X82324|POU3F4|5456|POU class 3 homeobox 4##BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC101720|HDX|139324|highly divergent homeobox##BC101722|HDX|139324|highly divergent homeobox##BC143522|HDX|139324|highly divergent homeobox##BX538112|HDX|139324|highly divergent homeobox##AK055240|HDX|139324|highly divergent homeobox##AK290050|HDX|139324|highly divergent homeobox##BX649166|HDX|139324|highly divergent homeobox##NM_001177478|HDX|139324|highly divergent homeobox##NM_001177479|HDX|139324|highly divergent homeobox##NM_144657|HDX|139324|highly divergent homeobox	0.141989	
chr2	130913768	130913879	reg1016132.p1	8.327	+	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	-11212	-	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	-26965	-	NM_032144 AL136727	-176588	+	TSC_hg19_v1_chr2_-_130929945 BC040941	16178	-	TSC_hg19_v1_chr2_-_130939163 BC064947 AK000304 AK303519 AK303427 AK301576 AK056501 AK298609 EU367941 AK299185 AK297257 NM_001171083 NM_017751 NM_017951	25414	-	NM_025029	25677	+	AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##BC040941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##BC064947|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK000304|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK303519|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK303427|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK301576|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK056501|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK298609|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##EU367941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK299185|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK297257|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_001171083|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_017751|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_017951|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_025029|MZT2B|80097|mitotic spindle organizing protein 2B	0.972187	CTCF.p2:-1:0.972
chr2	151467324	151467463	reg1017068.p2	8.327	+	X97758 BC012513 TSC_hg19_v1_chr2_-_151344182 AK298007 AK311312 NM_005168 AK313224	-123229	-	TSC_hg19_v1_chr2_-_150444290 NM_015702	-1023086	-	TSC_hg19_v1_chr2_-_150444250 BC023995 BC010894 AK310001 AF161510 BC022859 BC000932	-1023136	-	TSC_hg19_v1_chr2_-_152118378 BC136410 BC136411 AK127552 NM_198557	650940	-	TSC_hg19_v1_chr2_-_152146171 BC001268	678759	-	U32849 AK124323 TSC_hg19_v1_chr2_-_152146429 AK291548 AK298754 NM_004688	679010	-	X97758|RND3|390|Rho family GTPase 3##BC012513|RND3|390|Rho family GTPase 3##AK298007|RND3|390|Rho family GTPase 3##NM_005168|RND3|390|Rho family GTPase 3##AK313224|RND3|390|Rho family GTPase 3##NM_015702|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC023995|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC010894|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK310001|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF161510|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC022859|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC000932|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC136410|RBM43|375287|RNA binding motif protein 43##BC136411|RBM43|375287|RNA binding motif protein 43##AK127552|RBM43|375287|RNA binding motif protein 43##NM_198557|RBM43|375287|RNA binding motif protein 43##BC001268|NMI|9111|N-myc (and STAT) interactor##U32849|NMI|9111|N-myc (and STAT) interactor##AK124323|NMI|9111|N-myc (and STAT) interactor##AK291548|NMI|9111|N-myc (and STAT) interactor##AK298754|NMI|9111|N-myc (and STAT) interactor##NM_004688|NMI|9111|N-myc (and STAT) interactor	0.513314	CTCF.p2:7:0.414
chr2	76691552	76691686	reg1018020.p1	8.327	+	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-753568	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-753900	-	TSC_hg19_v1_chr2_+_75873908 NM_014763 AK295578 AK291250 BC030144 CU688824 AB463123 BC021051 D14660 DQ892303 DQ895502	-817681	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	1057799	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	2561219	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	2623514	-	BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_014763|MRPL19|9801|mitochondrial ribosomal protein L19##AK295578|MRPL19|9801|mitochondrial ribosomal protein L19##AK291250|MRPL19|9801|mitochondrial ribosomal protein L19##BC030144|MRPL19|9801|mitochondrial ribosomal protein L19##BC021051|MRPL19|9801|mitochondrial ribosomal protein L19##D14660|MRPL19|9801|mitochondrial ribosomal protein L19##DQ892303|MRPL19|9801|mitochondrial ribosomal protein L19##DQ895502|MRPL19|9801|mitochondrial ribosomal protein L19##BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta	0.2307	CTCF.p2:13:0.220
chr4	76649237	76649377	reg1015062.p1	8.326	+	TSC_hg19_v1_chr4_-_76598625 NM_203504 NM_203505	-50655	-	TSC_hg19_v1_chr4_-_76598595 BC011731 AK291772	-50728	-	AF053535 AF145284 TSC_hg19_v1_chr4_-_76598560	-50747	-	TSC_hg19_v1_chr4_-_76649558 AK311578	368	-	TSC_hg19_v1_chr4_+_76649761 BC016672 AL832010 BC006398	457	+	TSC_hg19_v1_chr4_+_76649814 AK314289	508	+	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)	0.484807	CTCF.p2:-1:0.485
chr15	80534625	80534754	reg1018098.p1	8.325	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-89313	+	TSC_hg19_v1_chr15_+_80445268 D28440 NM_000137 AK313951	-89437	+	TSC_hg19_v1_chr15_+_80445130 AK297965	-89557	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	162045	+	AK295763 TSC_hg19_v1_chr15_+_80733623	198916	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	452973	+	M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##D28440|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##NM_000137|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK313951|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK297965|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1	0.013284	
chr19	39930970	39931150	reg1015254.p2	8.325	+	CU678668 CU687136 DQ893449 DQ896219 TSC_hg19_v1_chr19_-_39926589 BC024970 BC007977 BC071674 M60854 BC095429 BC004324 AK055869 AK315498 D28392 NM_001020	-4484	-	AK024429 NM_022835	-27311	+	TSC_hg19_v1_chr19_+_39899749 AJ227917	-31267	+	NM_001111020 NM_001130824 NM_001130825 TSC_hg19_v1_chr19_+_39936212 AB000516	5138	+	TSC_hg19_v1_chr19_+_39936221 AK295137 AK296117 AK302954 Y12790	5167	+	TSC_hg19_v1_chr19_+_39936247 U56402	5185	+	DQ893449|RPS16|6217|ribosomal protein S16##DQ896219|RPS16|6217|ribosomal protein S16##BC024970|RPS16|6217|ribosomal protein S16##BC007977|RPS16|6217|ribosomal protein S16##BC071674|RPS16|6217|ribosomal protein S16##M60854|RPS16|6217|ribosomal protein S16##BC095429|RPS16|6217|ribosomal protein S16##BC004324|RPS16|6217|ribosomal protein S16##AK055869|RPS16|6217|ribosomal protein S16##AK315498|RPS16|6217|ribosomal protein S16##D28392|RPS16|6217|ribosomal protein S16##NM_001020|RPS16|6217|ribosomal protein S16##AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2##NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2##NM_001111020|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##NM_001130824|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##NM_001130825|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##AB000516|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##AK295137|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##AK296117|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##AK302954|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##Y12790|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##U56402|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)	0.32071	CTCF.p2:5:0.321
chr9	112642950	112643091	reg1016907.p2	8.324	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	-100405	+	BC039306 NM_001037293 AK095003	-239951	+	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	-382431	-	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	167889	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	167943	+	NM_001136562 AK300427	244772	+	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2	0.0	
chr10	123660157	123660304	reg1015439.p1	8.323	+	X52832 U11814 M87770 M87772 AB030073 AB030074 AB030075 AB030076 AB030077 AB030078 M80634 M87771 TSC_hg19_v1_chr10_-_123357946 M35718 M97193 BC096749 AK026508 BC039243 NM_000141 NM_001144917 NM_001144918 NM_001144919 NM_022970	-302472	-	AK294026 NM_001144915	-304072	-	AK308621 NM_001144916	-306459	-	TSC_hg19_v1_chr10_-_123687547 AK296356 AF079098 AF079099 AK303604 AK313057 BC022026 NM_001001976 NM_007041	27295	-	TSC_hg19_v1_chr10_-_123687979 AK299101 AK308926	27770	-	TSC_hg19_v1_chr10_-_123734310 AK301658 AK056579	74084	-	X52832|FGFR2|2263|fibroblast growth factor receptor 2##U11814|FGFR2|2263|fibroblast growth factor receptor 2##M87770|FGFR2|2263|fibroblast growth factor receptor 2##M87772|FGFR2|2263|fibroblast growth factor receptor 2##AB030073|FGFR2|2263|fibroblast growth factor receptor 2##AB030074|FGFR2|2263|fibroblast growth factor receptor 2##AB030075|FGFR2|2263|fibroblast growth factor receptor 2##AB030076|FGFR2|2263|fibroblast growth factor receptor 2##AB030077|FGFR2|2263|fibroblast growth factor receptor 2##AB030078|FGFR2|2263|fibroblast growth factor receptor 2##M80634|FGFR2|2263|fibroblast growth factor receptor 2##M87771|FGFR2|2263|fibroblast growth factor receptor 2##M97193|FGFR2|2263|fibroblast growth factor receptor 2##BC096749|FGFR2|2263|fibroblast growth factor receptor 2##AK026508|FGFR2|2263|fibroblast growth factor receptor 2##BC039243|FGFR2|2263|fibroblast growth factor receptor 2##NM_000141|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144917|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144918|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144919|FGFR2|2263|fibroblast growth factor receptor 2##NM_022970|FGFR2|2263|fibroblast growth factor receptor 2##AK294026|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2##AK308621|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144916|FGFR2|2263|fibroblast growth factor receptor 2##AK296356|ATE1|11101|arginyltransferase 1##AF079098|ATE1|11101|arginyltransferase 1##AF079099|ATE1|11101|arginyltransferase 1##AK303604|ATE1|11101|arginyltransferase 1##AK313057|ATE1|11101|arginyltransferase 1##BC022026|ATE1|11101|arginyltransferase 1##NM_001001976|ATE1|11101|arginyltransferase 1##NM_007041|ATE1|11101|arginyltransferase 1##AK299101|ATE1|11101|arginyltransferase 1##AK308926|ATE1|11101|arginyltransferase 1##AK301658|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##AK056579|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	0.399854	CTCF.p2:27:0.400
chr13	99495272	99495379	reg1015305.p2	8.323	+	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	-90420	-	TSC_hg19_v1_chr13_-_99229363 BC035578 BC065378 NM_001032296	-266014	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	-266203	-	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	134965	-	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	243366	-	AK290342 NM_001144072	357353	+	BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC035578|STK24|8428|serine/threonine kinase 24##BC065378|STK24|8428|serine/threonine kinase 24##NM_001032296|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24##AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9##AK290342|UBAC2|337867|UBA domain containing 2##NM_001144072|UBAC2|337867|UBA domain containing 2	0.950785	CTCF.p2:2:0.951
chr3	119278431	119278574	reg1015730.p1	8.323	+	M27533 BC042665 AK292129 NM_005191	-61	-	NM_016589 TSC_hg19_v1_chr3_+_119217393 AF139077 AL136622 AK026250 AK225954 AF210057 AL390077 AY358633 AL390090 BC012341 AB528090 AM393632 CU680290 CR457158 CR533524	-61029	+	TSC_hg19_v1_chr3_+_119187809 NM_152305 AY298903 BC030614 AK295984 AK301002 AK315367 AK222937 AF168711 BC048810 AY358581 AK075444 BC011871 CU688946 CU690580	-90677	+	TSC_hg19_v1_chr3_+_119298355 AK304560 AK291787	19893	+	BC063883 NM_001125 TSC_hg19_v1_chr3_+_119298606	20063	+	NM_001206960 NM_001206961 NM_015900 AK301880 AK222705 AK313519 BC035347 BC047703 U37591 AF035268 AF035269 AB527604 CU690470	38225	+	M27533|CD80|941|CD80 molecule##BC042665|CD80|941|CD80 molecule##AK292129|CD80|941|CD80 molecule##NM_005191|CD80|941|CD80 molecule##NM_016589|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF139077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL136622|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK026250|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK225954|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF210057|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AY358633|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390090|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##BC012341|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AM393632|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR457158|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR533524|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##NM_152305|POGLUT1|56983|protein O-glucosyltransferase 1##AY298903|POGLUT1|56983|protein O-glucosyltransferase 1##BC030614|POGLUT1|56983|protein O-glucosyltransferase 1##AK295984|POGLUT1|56983|protein O-glucosyltransferase 1##AK301002|POGLUT1|56983|protein O-glucosyltransferase 1##AK315367|POGLUT1|56983|protein O-glucosyltransferase 1##AK222937|POGLUT1|56983|protein O-glucosyltransferase 1##AF168711|POGLUT1|56983|protein O-glucosyltransferase 1##BC048810|POGLUT1|56983|protein O-glucosyltransferase 1##AY358581|POGLUT1|56983|protein O-glucosyltransferase 1##AK075444|POGLUT1|56983|protein O-glucosyltransferase 1##AK304560|ADPRH|141|ADP-ribosylarginine hydrolase##AK291787|ADPRH|141|ADP-ribosylarginine hydrolase##BC063883|ADPRH|141|ADP-ribosylarginine hydrolase##NM_001125|ADPRH|141|ADP-ribosylarginine hydrolase##NM_001206960|PLA1A|51365|phospholipase A1 member A##NM_001206961|PLA1A|51365|phospholipase A1 member A##NM_015900|PLA1A|51365|phospholipase A1 member A##AK301880|PLA1A|51365|phospholipase A1 member A##AK222705|PLA1A|51365|phospholipase A1 member A##AK313519|PLA1A|51365|phospholipase A1 member A##BC035347|PLA1A|51365|phospholipase A1 member A##BC047703|PLA1A|51365|phospholipase A1 member A##U37591|PLA1A|51365|phospholipase A1 member A##AF035268|PLA1A|51365|phospholipase A1 member A##AF035269|PLA1A|51365|phospholipase A1 member A	0.174037	
chr12	30997595	30997695	reg1013150.p2	8.322	+	AY074490 AY074491 NM_001002259 NM_001206856 NM_023925 NM_032156	-90198	-	TSC_hg19_v1_chr12_-_30848807 NM_006390	-148779	-	U77494 TSC_hg19_v1_chr12_-_30848794	-148875	-	TSC_hg19_v1_chr12_+_31079362 BC084571	81716	+	TSC_hg19_v1_chr12_+_31079681 AK293947	82015	+	AK300920 NM_001080509 TSC_hg19_v1_chr12_+_31079866 BC146917 BC146922	82219	+	AY074490|CAPRIN2|65981|caprin family member 2##AY074491|CAPRIN2|65981|caprin family member 2##NM_001002259|CAPRIN2|65981|caprin family member 2##NM_001206856|CAPRIN2|65981|caprin family member 2##NM_023925|CAPRIN2|65981|caprin family member 2##NM_032156|CAPRIN2|65981|caprin family member 2##NM_006390|IPO8|10526|importin 8##U77494|IPO8|10526|importin 8##AK293947|TSPAN11|441631|tetraspanin 11##AK300920|TSPAN11|441631|tetraspanin 11##NM_001080509|TSPAN11|441631|tetraspanin 11##BC146917|TSPAN11|441631|tetraspanin 11##BC146922|TSPAN11|441631|tetraspanin 11	0.999508	CTCF.p2:16:1.000
chr16	11907728	11907819	reg1015849.p2	8.322	+	TSC_hg19_v1_chr16_-_11891103 NM_014153	-16658	-	BC046363 BC036857 TSC_hg19_v1_chr16_-_11891096 AK091803 AX747194	-16722	-	TSC_hg19_v1_chr16_-_11836686 AK297094 BX648407 AK027646 NM_015914 BC002856 BC018635	-71117	-	AY598331 HQ258262 HQ258426 AJ007398 BC019069 TSC_hg19_v1_chr16_-_11945392 AK000822 BC009802 BC017899 BC107782 BC070325 AY154473 BC112228 BC113699 BC016362 AL049999 AK295935 NM_015659	37631	-	TSC_hg19_v1_chr16_-_12009569 AB590486	101830	-	BC009503 TSC_hg19_v1_chr16_-_12009763 AK095483	101975	-	NM_014153|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC046363|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC036857|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK091803|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK297094|TXNDC11|51061|thioredoxin domain containing 11##BX648407|TXNDC11|51061|thioredoxin domain containing 11##AK027646|TXNDC11|51061|thioredoxin domain containing 11##NM_015914|TXNDC11|51061|thioredoxin domain containing 11##BC002856|TXNDC11|51061|thioredoxin domain containing 11##BC018635|TXNDC11|51061|thioredoxin domain containing 11##AY598331|RSL1D1|26156|ribosomal L1 domain containing 1##HQ258262|RSL1D1|26156|ribosomal L1 domain containing 1##HQ258426|RSL1D1|26156|ribosomal L1 domain containing 1##AJ007398|RSL1D1|26156|ribosomal L1 domain containing 1##BC019069|RSL1D1|26156|ribosomal L1 domain containing 1##AK000822|RSL1D1|26156|ribosomal L1 domain containing 1##BC009802|RSL1D1|26156|ribosomal L1 domain containing 1##BC017899|RSL1D1|26156|ribosomal L1 domain containing 1##BC107782|RSL1D1|26156|ribosomal L1 domain containing 1##BC070325|RSL1D1|26156|ribosomal L1 domain containing 1##AY154473|RSL1D1|26156|ribosomal L1 domain containing 1##BC112228|RSL1D1|26156|ribosomal L1 domain containing 1##BC113699|RSL1D1|26156|ribosomal L1 domain containing 1##BC016362|RSL1D1|26156|ribosomal L1 domain containing 1##AL049999|RSL1D1|26156|ribosomal L1 domain containing 1##AK295935|RSL1D1|26156|ribosomal L1 domain containing 1##NM_015659|RSL1D1|26156|ribosomal L1 domain containing 1##BC009503|GSPT1|2935|G1 to S phase transition 1##AK095483|GSPT1|2935|G1 to S phase transition 1	0.068623	
chr21	45031862	45031971	reg1014484.p1	8.322	+	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	-184921	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	-185927	-	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-442742	+	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	47446	-	TSC_hg19_v1_chr21_+_45079444 BC028386 NM_015056 BC014005 AK056263 D80001 AB385292	47542	+	TSC_hg19_v1_chr21_+_45138985 BC005825 NM_003681	107063	+	AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein##BC028386|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##NM_015056|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##BC014005|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##AK056263|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##D80001|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##BC005825|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase##NM_003681|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase	0.348016	CTCF.p2:-2:0.348
chr6	138830648	138830752	reg1015073.p1	8.322	+	TSC_hg19_v1_chr6_-_138820580 AK092744 AX747703	-10084	-	AK307584 NM_001144060 TSC_hg19_v1_chr6_-_138820579	-10122	-	BC010290 TSC_hg19_v1_chr6_+_138725477 BC008205 BC093037 AF411610	-105155	+	TSC_hg19_v1_chr6_-_138893682 NM_020464	63008	-	TSC_hg19_v1_chr6_+_139013613 AK128874	182913	+	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	264090	+	AK307584|NHSL1|57224|NHS-like 1##NM_001144060|NHSL1|57224|NHS-like 1##BC010290|HEBP2|23593|heme binding protein 2##BC008205|HEBP2|23593|heme binding protein 2##BC093037|HEBP2|23593|heme binding protein 2##AF411610|HEBP2|23593|heme binding protein 2##NM_020464|NHSL1|57224|NHS-like 1##AK128874|FLJ46906|441172|uncharacterized LOC441172##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A	0.686402	CTCF.p2:8:0.686
chr10	81107061	81107178	reg1014945.p1	8.321	+	AL049432 TSC_hg19_v1_chr10_+_81073775 AK023603	-33280	+	TSC_hg19_v1_chr10_+_81070578 BC025342 BC068072	-36475	+	AK299728 TSC_hg19_v1_chr10_+_81065901	-41231	+	NM_005729 TSC_hg19_v1_chr10_+_81107224 AK312757 AK296669	104	+	TSC_hg19_v1_chr10_+_81107228 M80254 BC005020	113	+	BC013204 BC110299 TSC_hg19_v1_chr10_+_81107252	130	+	AL049432|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK023603|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC025342|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC068072|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK299728|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_005729|PPIF|10105|peptidylprolyl isomerase F##AK312757|PPIF|10105|peptidylprolyl isomerase F##AK296669|PPIF|10105|peptidylprolyl isomerase F##M80254|PPIF|10105|peptidylprolyl isomerase F##BC005020|PPIF|10105|peptidylprolyl isomerase F##BC013204|PPIF|10105|peptidylprolyl isomerase F##BC110299|PPIF|10105|peptidylprolyl isomerase F	0.044513	
chr12	119151935	119152064	reg1017394.p1	8.321	+	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	-337597	+	TSC_hg19_v1_chr12_-_118810713 NM_016281	-341269	-	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	-341371	-	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	267348	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	464680	+	BC040553 NM_178499	620517	+	BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_016281|TAOK3|51347|TAO kinase 3##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60	0.9998	CTCF.p2:-2:1.000
chr14	100491691	100491791	reg1015246.p2	8.321	+	AK295919 TSC_hg19_v1_chr14_+_100485800	-5982	+	TSC_hg19_v1_chr14_+_100438137 AK289720 BC023997	-53587	+	TSC_hg19_v1_chr14_+_100259749 AK126980 BX247979 NM_001008707 NM_004434 BC033043 U97018 BC032541 CU689414 DQ891556 DQ894743	-232037	+	TSC_hg19_v1_chr14_+_100531758 NM_016337 AK301379	40011	+	TSC_hg19_v1_chr14_+_100531768 AF087843 BC032358 AF052504	40054	+	AF131766 TSC_hg19_v1_chr14_+_100563847	72092	+	AK295919|EVL|51466|Enah/Vasp-like##AK289720|EVL|51466|Enah/Vasp-like##BC023997|EVL|51466|Enah/Vasp-like##AK126980|EML1|2009|echinoderm microtubule associated protein like 1##BX247979|EML1|2009|echinoderm microtubule associated protein like 1##NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1##NM_004434|EML1|2009|echinoderm microtubule associated protein like 1##BC033043|EML1|2009|echinoderm microtubule associated protein like 1##U97018|EML1|2009|echinoderm microtubule associated protein like 1##BC032541|EML1|2009|echinoderm microtubule associated protein like 1##DQ891556|EML1|2009|echinoderm microtubule associated protein like 1##DQ894743|EML1|2009|echinoderm microtubule associated protein like 1##NM_016337|EVL|51466|Enah/Vasp-like##AK301379|EVL|51466|Enah/Vasp-like##AF087843|EVL|51466|Enah/Vasp-like##BC032358|EVL|51466|Enah/Vasp-like##AF052504|EVL|51466|Enah/Vasp-like##AF131766|EVL|51466|Enah/Vasp-like	1.034857	CTCF.p2:-1:0.989
chr17	45578125	45578247	reg1016070.p1	8.321	+	TSC_hg19_v1_chr17_-_45569837 BC090855 BC067758	-8342	-	TSC_hg19_v1_chr17_+_45401357 NM_001195192 NM_152347 BC036407 BC037876	-176854	+	BC044604 TSC_hg19_v1_chr17_+_45401141	-177045	+	NM_006310 TSC_hg19_v1_chr17_+_45608460	30267	+	TSC_hg19_v1_chr17_+_45608556 AK096709	30386	+	TSC_hg19_v1_chr17_+_45608647 AK095877 AK296887 AJ132583	30495	+	BC090855|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2##BC067758|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2##NM_001195192|C17orf57|124989|chromosome 17 open reading frame 57##NM_152347|C17orf57|124989|chromosome 17 open reading frame 57##BC036407|C17orf57|124989|chromosome 17 open reading frame 57##BC037876|C17orf57|124989|chromosome 17 open reading frame 57##BC044604|C17orf57|124989|chromosome 17 open reading frame 57##NM_006310|NPEPPS|9520|aminopeptidase puromycin sensitive##AK096709|NPEPPS|9520|aminopeptidase puromycin sensitive##AK095877|NPEPPS|9520|aminopeptidase puromycin sensitive##AK296887|NPEPPS|9520|aminopeptidase puromycin sensitive##AJ132583|NPEPPS|9520|aminopeptidase puromycin sensitive	0.99225	CTCF.p2:-22:0.992
chr19	48246962	48247091	reg1015935.p2	8.321	+	NM_014601 TSC_hg19_v1_chr19_+_48216678 AK315548 AK074701 AK097126 AK097228 AK296907 AK298067 BC014445	-30376	+	TSC_hg19_v1_chr19_+_48111441 BC032065 NM_015711	-135582	+	NM_001101419	-187914	-	NM_015710 TSC_hg19_v1_chr19_+_48248797	1768	+	TSC_hg19_v1_chr19_+_48248802 AK303180 AK297877 AK303918 AK309788 AK301117 AF182076 BC006311 BC013203 AY535000 CU679611 DQ892724 DQ895973 AK024486 BC013235 BC013307 BC014009 BC039869 BC007248 BC004229 AF296124 AL359336 AL359335	1809	+	NM_003009 TSC_hg19_v1_chr19_+_48281965 BC039597 BC032546 BC047893 BC000581 U67171 AF015283	34900	+	NM_014601|EHD2|30846|EH-domain containing 2##AK315548|EHD2|30846|EH-domain containing 2##AK074701|EHD2|30846|EH-domain containing 2##AK097126|EHD2|30846|EH-domain containing 2##AK097228|EHD2|30846|EH-domain containing 2##AK296907|EHD2|30846|EH-domain containing 2##AK298067|EHD2|30846|EH-domain containing 2##BC014445|EHD2|30846|EH-domain containing 2##BC032065|GLTSCR1|29998|glioma tumor suppressor candidate region gene 1##NM_015711|GLTSCR1|29998|glioma tumor suppressor candidate region gene 1##NM_001101419|ZNF541|84215|zinc finger protein 541##NM_015710|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK297877|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK303918|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK309788|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK301117|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF182076|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC006311|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013203|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AY535000|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ892724|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ895973|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK024486|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013235|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013307|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC014009|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC039869|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC007248|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC004229|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF296124|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359336|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359335|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##NM_003009|SEPW1|6415|selenoprotein W, 1##BC039597|SEPW1|6415|selenoprotein W, 1##BC032546|SEPW1|6415|selenoprotein W, 1##BC047893|SEPW1|6415|selenoprotein W, 1##BC000581|SEPW1|6415|selenoprotein W, 1##U67171|SEPW1|6415|selenoprotein W, 1##AF015283|SEPW1|6415|selenoprotein W, 1	0.99504	CTCF.p2:6:0.995
chr8	32406692	32406796	reg1016686.p2	8.321	+	AK298132 NM_001160002 NM_001160004 NM_001160005 NM_001160007 NM_001160008 NM_004495 NM_013956 NM_013957 NM_013958 NM_013960 NM_013964 M94168 BC006492 TSC_hg19_v1_chr8_+_32405834 M94167 AF026146 AK097005 AK290730 L12261	-955	+	NM_013962	-909477	+	TSC_hg19_v1_chr8_+_30891325 AF091214	-1515453	+	AK289927 NM_013959	97506	+	NM_001159996 AK293270 AK293240	172648	+	TSC_hg19_v1_chr8_+_32785485 BC034319	378745	+	AK298132|NRG1|3084|neuregulin 1##NM_001160002|NRG1|3084|neuregulin 1##NM_001160004|NRG1|3084|neuregulin 1##NM_001160005|NRG1|3084|neuregulin 1##NM_001160007|NRG1|3084|neuregulin 1##NM_001160008|NRG1|3084|neuregulin 1##NM_004495|NRG1|3084|neuregulin 1##NM_013956|NRG1|3084|neuregulin 1##NM_013957|NRG1|3084|neuregulin 1##NM_013958|NRG1|3084|neuregulin 1##NM_013960|NRG1|3084|neuregulin 1##NM_013964|NRG1|3084|neuregulin 1##M94168|NRG1|3084|neuregulin 1##BC006492|NRG1|3084|neuregulin 1##M94167|NRG1|3084|neuregulin 1##AF026146|NRG1|3084|neuregulin 1##AK097005|NRG1|3084|neuregulin 1##AK290730|NRG1|3084|neuregulin 1##L12261|NRG1|3084|neuregulin 1##NM_013962|NRG1|3084|neuregulin 1##AF091214|WRN|7486|Werner syndrome, RecQ helicase-like##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1##NM_001159996|NRG1|3084|neuregulin 1##AK293270|NRG1|3084|neuregulin 1##AK293240|NRG1|3084|neuregulin 1	0.929186	CTCF.p2:5:0.929
chrX	54274860	54274979	reg1013593.p1	8.321	+	TSC_hg19_v1_chrX_-_54209659 BC073166 AK000513 BC136413 BC144081 AY150025 AY121803 BC016138 NM_017848 NM_198456	-65238	-	NM_001184896	-203351	-	NM_001184897 NM_015107 TSC_hg19_v1_chrX_-_54070722	-204252	-	TSC_hg19_v1_chrX_-_54384446 AY352048 NM_001002838 NM_020922	109523	-	TSC_hg19_v1_chrX_+_54466843 BC007699 BC011825 NM_058163 CU680068 U92980	191929	+	AB384834 TSC_hg19_v1_chrX_-_54522017 BC034530	247069	-	BC073166|FAM120C|54954|family with sequence similarity 120C##AK000513|FAM120C|54954|family with sequence similarity 120C##BC136413|FAM120C|54954|family with sequence similarity 120C##BC144081|FAM120C|54954|family with sequence similarity 120C##AY150025|FAM120C|54954|family with sequence similarity 120C##AY121803|FAM120C|54954|family with sequence similarity 120C##BC016138|FAM120C|54954|family with sequence similarity 120C##NM_017848|FAM120C|54954|family with sequence similarity 120C##NM_198456|FAM120C|54954|family with sequence similarity 120C##NM_001184896|PHF8|23133|PHD finger protein 8##NM_001184897|PHF8|23133|PHD finger protein 8##NM_015107|PHF8|23133|PHD finger protein 8##AY352048|WNK3|65267|WNK lysine deficient protein kinase 3##NM_001002838|WNK3|65267|WNK lysine deficient protein kinase 3##NM_020922|WNK3|65267|WNK lysine deficient protein kinase 3##BC007699|TSR2|90121|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)##BC011825|TSR2|90121|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)##NM_058163|TSR2|90121|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)##U92980|TSR2|90121|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)##BC034530|FGD1|2245|FYVE, RhoGEF and PH domain containing 1	0.161949	
chr1	158005916	158006040	reg1017840.p1	8.320	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	-42590	+	AY302131 NM_018240	-42916	+	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	-194416	-	BC027926 NM_001766	143758	+	AK225996 TSC_hg19_v1_chr1_+_158150684 AK310541 J04142 AK310749 AB590619 CU693322	144806	+	M28825 NM_001763	217948	+	BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##AY302131|KIRREL|55243|kin of IRRE like (Drosophila)##NM_018240|KIRREL|55243|kin of IRRE like (Drosophila)##DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule##AK225996|CD1D|912|CD1d molecule##J04142|CD1D|912|CD1d molecule##AK310749|CD1D|912|CD1d molecule##M28825|CD1A|909|CD1a molecule##NM_001763|CD1A|909|CD1a molecule	0.710621	CTCF.p2:-1:0.711
chr18	27454623	27454745	reg1016959.p1	8.320	+	TSC_hg19_v1_chr18_-_25757363 NM_001792	-1697287	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	-1697647	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-2689451	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	1168018	-	CR749226 TSC_hg19_v1_chr18_-_28681542	1226804	-	TSC_hg19_v1_chr18_-_28682275 EF017811 EF017812 X56807 AK297029 AK290313 BX648425 BC063291 NM_004949 NM_024422	1227507	-	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3##CR749226|DSC2|1824|desmocollin 2##EF017811|DSC2|1824|desmocollin 2##EF017812|DSC2|1824|desmocollin 2##X56807|DSC2|1824|desmocollin 2##AK297029|DSC2|1824|desmocollin 2##AK290313|DSC2|1824|desmocollin 2##BX648425|DSC2|1824|desmocollin 2##BC063291|DSC2|1824|desmocollin 2##NM_004949|DSC2|1824|desmocollin 2##NM_024422|DSC2|1824|desmocollin 2	0.96619	CTCF.p2:-12:0.966
chr17	79568661	79568781	reg1017959.p1	8.319	+	TSC_hg19_v1_chr17_-_79519415 AK024644 BC008883 DQ989324 NM_025161	-49322	-	AL834374 TSC_hg19_v1_chr17_-_79514725	-54027	-	NM_001077182 NM_012418 AF030165 BC126295 BC130330 HQ258429	-73235	+	DQ895356 TSC_hg19_v1_chr17_-_79604087 AB040932 AK000664	35302	-	TSC_hg19_v1_chr17_-_79604107 AK294473	35381	-	TSC_hg19_v1_chr17_-_79604120 BC025930	35397	-	AK024644|C17orf70|80233|chromosome 17 open reading frame 70##BC008883|C17orf70|80233|chromosome 17 open reading frame 70##DQ989324|C17orf70|80233|chromosome 17 open reading frame 70##NM_025161|C17orf70|80233|chromosome 17 open reading frame 70##AL834374|C17orf70|80233|chromosome 17 open reading frame 70##NM_001077182|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##NM_012418|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##AF030165|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC126295|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC130330|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##HQ258429|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##DQ895356|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AB040932|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AK000664|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AK294473|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##BC025930|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)	0.979318	CTCF.p2:16:0.979
chr18	49194459	49194639	reg1000578.p1	8.319	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-470509	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-470837	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-471323	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	671992	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	672564	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2496443	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.0	
chr20	4052829	4052954	reg1017560.p1	8.319	+	AL096778 NM_007219 BC039584 TSC_hg19_v1_chr20_-_3996221 BC000213 BC003141 NM_001134337 NM_001134338 BC032738	-56726	-	NM_153640 BC107724 BC065019	-182402	+	TSC_hg19_v1_chr20_+_3870042 AK310190 AK097796 BC142976 BC009421	-182835	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	76544	+	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	76632	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	176699	-	AL096778|RNF24|11237|ring finger protein 24##NM_007219|RNF24|11237|ring finger protein 24##BC039584|RNF24|11237|ring finger protein 24##BC000213|RNF24|11237|ring finger protein 24##NM_001134337|RNF24|11237|ring finger protein 24##NM_001134338|RNF24|11237|ring finger protein 24##NM_153640|PANK2|80025|pantothenate kinase 2##BC107724|PANK2|80025|pantothenate kinase 2##BC065019|PANK2|80025|pantothenate kinase 2##AK310190|PANK2|80025|pantothenate kinase 2##AK097796|PANK2|80025|pantothenate kinase 2##BC142976|PANK2|80025|pantothenate kinase 2##BC009421|PANK2|80025|pantothenate kinase 2##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor	0.952725	CTCF.p2:5:0.953
chr2	47146109	47146239	reg1017338.p1	8.319	+	NM_001171507 NM_001171510	-2924	-	TSC_hg19_v1_chr2_-_47142950 NM_001171506 NM_001171509 NM_139279	-3186	-	TSC_hg19_v1_chr2_-_47142939 AL833900 AF537214 CR749562	-3231	-	AL834383 NM_020458 TSC_hg19_v1_chr2_+_47168358	22162	+	TSC_hg19_v1_chr2_+_47168400 BC047709 BC111487	22229	+	AK292127 TSC_hg19_v1_chr2_-_47168875 AK293889	22699	-	NM_001171507|MCFD2|90411|multiple coagulation factor deficiency 2##NM_001171510|MCFD2|90411|multiple coagulation factor deficiency 2##NM_001171506|MCFD2|90411|multiple coagulation factor deficiency 2##NM_001171509|MCFD2|90411|multiple coagulation factor deficiency 2##NM_139279|MCFD2|90411|multiple coagulation factor deficiency 2##AL833900|MCFD2|90411|multiple coagulation factor deficiency 2##AF537214|MCFD2|90411|multiple coagulation factor deficiency 2##CR749562|MCFD2|90411|multiple coagulation factor deficiency 2##AL834383|TTC7A|57217|tetratricopeptide repeat domain 7A##NM_020458|TTC7A|57217|tetratricopeptide repeat domain 7A##BC111487|TTC7A|57217|tetratricopeptide repeat domain 7A##AK292127|MCFD2|90411|multiple coagulation factor deficiency 2##AK293889|MCFD2|90411|multiple coagulation factor deficiency 2	0.746495	CTCF.p2:9:0.746
chr5	77829299	77829429	reg1013916.p1	8.319	+	TSC_hg19_v1_chr5_-_77806191 AK125227	-23168	-	D86961 BC136335 BC136336 AY309920 TSC_hg19_v1_chr5_-_77806179	-23310	-	NM_004866 TSC_hg19_v1_chr5_+_77656440 AF038966 AK304452 AK225172 BC009787 BC015065 AK298146 BC034048 AK290225 CR542286 CU677209	-172948	+	CR936660 TSC_hg19_v1_chr5_-_77845052	15659	-	TSC_hg19_v1_chr5_-_77944584 NM_005779	115202	-	J05225 TSC_hg19_v1_chr5_-_78281101	451724	-	AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##NM_004866|SCAMP1|9522|secretory carrier membrane protein 1##AF038966|SCAMP1|9522|secretory carrier membrane protein 1##AK304452|SCAMP1|9522|secretory carrier membrane protein 1##AK225172|SCAMP1|9522|secretory carrier membrane protein 1##BC009787|SCAMP1|9522|secretory carrier membrane protein 1##BC015065|SCAMP1|9522|secretory carrier membrane protein 1##AK298146|SCAMP1|9522|secretory carrier membrane protein 1##BC034048|SCAMP1|9522|secretory carrier membrane protein 1##AK290225|SCAMP1|9522|secretory carrier membrane protein 1##CR542286|SCAMP1|9522|secretory carrier membrane protein 1##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B	0.0	
chr8	66474391	66474516	reg1016133.p2	8.319	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	-763174	-	TSC_hg19_v1_chr8_+_65493611 AK091333	-980789	+	NM_152414 AK293979	-981595	+	TSC_hg19_v1_chr8_-_66546394 AK001373	71942	-	TSC_hg19_v1_chr8_-_66546404 AK304463	71953	-	TSC_hg19_v1_chr8_-_66546413 BC011607 BC018846 NM_018120	71979	-	BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK001373|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1##BC011607|ARMC1|55156|armadillo repeat containing 1##BC018846|ARMC1|55156|armadillo repeat containing 1##NM_018120|ARMC1|55156|armadillo repeat containing 1	0.953338	CTCF.p2:0:0.953
chr12	94136239	94136349	reg1013654.p2	8.318	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-65111	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-170693	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-171474	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	406210	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	717237	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	717348	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.218846	CTCF.p2:100:0.219
chrX	7894050	7894151	reg1013365.p1	8.318	+	AF167081 NM_013452	-83798	+	NM_000351 M16505 J04964 AK314034	-756599	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	-827908	-	AK289888 U03886 NM_004650 BC020746	1350	-	AK304586 TSC_hg19_v1_chrX_-_7895766 NM_001142389 NM_001172672	1671	-	AF167079 NM_016378	245207	-	AF167081|VCX|26609|variable charge, X-linked##NM_013452|VCX|26609|variable charge, X-linked##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK289888|PNPLA4|8228|patatin-like phospholipase domain containing 4##U03886|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_004650|PNPLA4|8228|patatin-like phospholipase domain containing 4##BC020746|PNPLA4|8228|patatin-like phospholipase domain containing 4##AK304586|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001142389|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001172672|PNPLA4|8228|patatin-like phospholipase domain containing 4##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016378|VCX2|51480|variable charge, X-linked 2	0.990294	CTCF.p2:4:0.990
chr22	24881680	24881799	reg1014371.p1	8.317	+	NM_000675 AK123058 EU036693 AK301420 BC013780	-58174	+	TSC_hg19_v1_chr22_+_24819870 EU036694	-61859	+	TSC_hg19_v1_chr22_+_24666804 NM_001145468 NM_015330 AK097129 AK301482 AB209022 AL832425 BC005093 BC136471	-214899	+	AK314727 CR627429 CR456375 NM_016327 BC131703 TSC_hg19_v1_chr22_+_24891299 AF163312 AB013885 BC033388 AB528843 BC139840 BC139843 CU013080 CU013368	9502	+	CU687038 TSC_hg19_v1_chr22_-_24951093 BC053529 AK296893	69306	-	TSC_hg19_v1_chr22_-_24951145 AK054681 AK294972	69404	-	NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor##EU036694|ADORA2A|135|adenosine A2a receptor##NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK314727|UPB1|51733|ureidopropionase, beta##CR627429|UPB1|51733|ureidopropionase, beta##CR456375|UPB1|51733|ureidopropionase, beta##NM_016327|UPB1|51733|ureidopropionase, beta##BC131703|UPB1|51733|ureidopropionase, beta##AF163312|UPB1|51733|ureidopropionase, beta##AB013885|UPB1|51733|ureidopropionase, beta##BC033388|UPB1|51733|ureidopropionase, beta##BC139840|UPB1|51733|ureidopropionase, beta##BC139843|UPB1|51733|ureidopropionase, beta##CU013080|UPB1|51733|ureidopropionase, beta##CU013368|UPB1|51733|ureidopropionase, beta##BC053529|C22orf13|83606|chromosome 22 open reading frame 13##AK296893|C22orf13|83606|chromosome 22 open reading frame 13##AK054681|C22orf13|83606|chromosome 22 open reading frame 13##AK294972|C22orf13|83606|chromosome 22 open reading frame 13	0.301244	CTCF.p2:25:0.301
chrX	54666411	54666524	reg1015336.p1	8.317	+	TSC_hg19_v1_chrX_+_54556746 BC003603 BC011720	-109726	+	TSC_hg19_v1_chrX_+_54556670 AK001475 NM_001184819 NM_019067	-109807	+	TSC_hg19_v1_chrX_-_54522668 AK299635 AK226117 NM_004463 U11690	-143871	-	AY358170 NM_198510	158205	-	TSC_hg19_v1_chrX_+_54834177 NM_177433 AK297910 AK092463 AX747558 AF126181 AF128527 AF128528 AK301821 U92544 BC091503	167689	+	TSC_hg19_v1_chrX_+_54834810 NM_014599 AK098645 BC000304 AK301599	168340	+	BC003603|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##BC011720|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##AK001475|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##NM_001184819|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##NM_019067|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##AK299635|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##AK226117|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##NM_004463|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##U11690|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##AY358170|ITIH6|347365|inter-alpha-trypsin inhibitor heavy chain family, member 6##NM_198510|ITIH6|347365|inter-alpha-trypsin inhibitor heavy chain family, member 6##NM_177433|MAGED2|10916|melanoma antigen family D, 2##AK297910|MAGED2|10916|melanoma antigen family D, 2##AK092463|MAGED2|10916|melanoma antigen family D, 2##AF126181|MAGED2|10916|melanoma antigen family D, 2##AF128527|MAGED2|10916|melanoma antigen family D, 2##AF128528|MAGED2|10916|melanoma antigen family D, 2##AK301821|MAGED2|10916|melanoma antigen family D, 2##U92544|MAGED2|10916|melanoma antigen family D, 2##BC091503|MAGED2|10916|melanoma antigen family D, 2##NM_014599|MAGED2|10916|melanoma antigen family D, 2##AK098645|MAGED2|10916|melanoma antigen family D, 2##BC000304|MAGED2|10916|melanoma antigen family D, 2##AK301599|MAGED2|10916|melanoma antigen family D, 2	0.910942	CTCF.p2:3:0.911
chr14	91607144	91607282	reg1019317.p1	8.316	+	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-26186	+	AK123532 TSC_hg19_v1_chr14_+_91580717 BC065558 BX248782 AK091394 AK022564	-26464	+	TSC_hg19_v1_chr14_+_91580472 AK023200	-26701	+	BC128536 NM_001177676	103638	-	BC098567 NM_003485	112981	-	TSC_hg19_v1_chr14_-_91884159 AF070587	276935	-	NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AK123532|C14orf159|80017|chromosome 14 open reading frame 159##BC065558|C14orf159|80017|chromosome 14 open reading frame 159##BX248782|C14orf159|80017|chromosome 14 open reading frame 159##AK091394|C14orf159|80017|chromosome 14 open reading frame 159##AK022564|C14orf159|80017|chromosome 14 open reading frame 159##AK023200|C14orf159|80017|chromosome 14 open reading frame 159##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##AF070587|CCDC88C|440193|coiled-coil domain containing 88C	0.991973	CTCF.p2:17:0.992
chr17	7249276	7249428	reg1018443.p1	8.315	+	NM_014716 TSC_hg19_v1_chr17_+_7239850 D30758 BC018543	-9493	+	TSC_hg19_v1_chr17_-_7232655 AL136870 AB058690 NM_001005408 NM_032442 AL833570	-16665	-	TSC_hg19_v1_chr17_-_7218697 AK301877 U28963 BC107738 BC103901 BC103902 BC103903	-30579	-	BC103744 NM_001002914	5855	+	TSC_hg19_v1_chr17_+_7255480 AK056227 AY646650	6190	+	BC040900 AY358218 BC107110 NM_198154	9123	+	NM_014716|ACAP1|9744|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1##D30758|ACAP1|9744|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1##BC018543|ACAP1|9744|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1##AL136870|NEURL4|84461|neuralized homolog 4 (Drosophila)##AB058690|NEURL4|84461|neuralized homolog 4 (Drosophila)##NM_001005408|NEURL4|84461|neuralized homolog 4 (Drosophila)##NM_032442|NEURL4|84461|neuralized homolog 4 (Drosophila)##AL833570|NEURL4|84461|neuralized homolog 4 (Drosophila)##AK301877|GPS2|2874|G protein pathway suppressor 2##U28963|GPS2|2874|G protein pathway suppressor 2##BC107738|GPS2|2874|G protein pathway suppressor 2##BC103901|GPS2|2874|G protein pathway suppressor 2##BC103902|GPS2|2874|G protein pathway suppressor 2##BC103903|GPS2|2874|G protein pathway suppressor 2##BC103744|KCTD11|147040|potassium channel tetramerisation domain containing 11##NM_001002914|KCTD11|147040|potassium channel tetramerisation domain containing 11##AK056227|KCTD11|147040|potassium channel tetramerisation domain containing 11##AY646650|KCTD11|147040|potassium channel tetramerisation domain containing 11##BC040900|TMEM95|339168|transmembrane protein 95##AY358218|TMEM95|339168|transmembrane protein 95##BC107110|TMEM95|339168|transmembrane protein 95##NM_198154|TMEM95|339168|transmembrane protein 95	0.999564	CTCF.p2:-22:1.000
chr20	4930646	4930768	reg1016034.p2	8.315	+	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	-126513	-	AY154472 NM_170774	-134939	-	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	-228173	+	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	51453	-	BC013112 AF164142 NM_203327	60218	-	TSC_hg19_v1_chr20_-_5093685 AY359115 BC015113 AK055700 BC110408 BC011990 BC009768 BC009770 AF161392 BC009769 AK315606 BC066317 AK309823 BC070212 NM_001009923 NM_001009924 NM_001009925 NM_014145	162908	-	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##BC013112|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AF164142|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_203327|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AY359115|C20orf30|29058|chromosome 20 open reading frame 30##BC015113|C20orf30|29058|chromosome 20 open reading frame 30##AK055700|C20orf30|29058|chromosome 20 open reading frame 30##BC110408|C20orf30|29058|chromosome 20 open reading frame 30##BC011990|C20orf30|29058|chromosome 20 open reading frame 30##BC009768|C20orf30|29058|chromosome 20 open reading frame 30##BC009770|C20orf30|29058|chromosome 20 open reading frame 30##AF161392|C20orf30|29058|chromosome 20 open reading frame 30##BC009769|C20orf30|29058|chromosome 20 open reading frame 30##AK315606|C20orf30|29058|chromosome 20 open reading frame 30##BC066317|C20orf30|29058|chromosome 20 open reading frame 30##AK309823|C20orf30|29058|chromosome 20 open reading frame 30##BC070212|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009923|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009924|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009925|C20orf30|29058|chromosome 20 open reading frame 30##NM_014145|C20orf30|29058|chromosome 20 open reading frame 30	0.0	
chr8	129281867	129281986	reg1016078.p2	8.315	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-475143	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-533436	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-533601	+	AB042405 NM_031415	1517207	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1669989	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1670080	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.765932	CTCF.p2:0:0.766
chr9	22813689	22813814	reg1015633.p1	8.315	+	AJ290954 TSC_hg19_v1_chr9_+_22447458 AK130018	-366302	+	AB464510 TSC_hg19_v1_chr9_+_22447162	-366638	+	TSC_hg19_v1_chr9_+_22446846 AK096011 NM_022160 BC130435 BC130437	-366914	+	BC030692 NM_001171197	1007726	-	TSC_hg19_v1_chr9_-_23821819 BC035004	1008062	-	BC042393 NM_001171195 TSC_hg19_v1_chr9_-_23821847	1008093	-	AJ290954|DMRTA1|63951|DMRT-like family A1##AK130018|DMRTA1|63951|DMRT-like family A1##AK096011|DMRTA1|63951|DMRT-like family A1##NM_022160|DMRTA1|63951|DMRT-like family A1##BC130435|DMRTA1|63951|DMRT-like family A1##BC130437|DMRTA1|63951|DMRT-like family A1##BC030692|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171197|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC035004|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC042393|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171195|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	0.919787	CTCF.p2:-31:0.898
chr9	19049125	19049271	reg1016425.p2	8.314	+	BC033489 AK292245 AK057474 NM_153707	-15979	-	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	-575015	+	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	-575110	+	TSC_hg19_v1_chr9_+_19049372 NM_006570	165	+	TSC_hg19_v1_chr9_+_19049391 BC009990	193	+	TSC_hg19_v1_chr9_+_19049413 U41654	214	+	BC033489|FAM154A|158297|family with sequence similarity 154, member A##AK292245|FAM154A|158297|family with sequence similarity 154, member A##AK057474|FAM154A|158297|family with sequence similarity 154, member A##NM_153707|FAM154A|158297|family with sequence similarity 154, member A##AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##NM_006570|RRAGA|10670|Ras-related GTP binding A##BC009990|RRAGA|10670|Ras-related GTP binding A##U41654|RRAGA|10670|Ras-related GTP binding A	0.999275	CTCF.p2:-26:0.999
chr1	153438326	153438451	reg1014124.p1	8.313	+	BC034687 M86757 NM_002963	-5268	-	NM_001045479	-25886	-	AY189118 NM_176823	-49389	+	TSC_hg19_v1_chr1_-_153508468 AK312088 D28464	70077	-	TSC_hg19_v1_chr1_-_153508522 BC001431	70144	-	TSC_hg19_v1_chr1_-_153508622 BC009017 NM_014624	70268	-	BC034687|S100A7|6278|S100 calcium binding protein A7##M86757|S100A7|6278|S100 calcium binding protein A7##NM_002963|S100A7|6278|S100 calcium binding protein A7##NM_001045479|S100A7L2|645922|S100 calcium binding protein A7-like 2##AY189118|S100A7A|338324|S100 calcium binding protein A7A##NM_176823|S100A7A|338324|S100 calcium binding protein A7A##AK312088|S100A6|6277|S100 calcium binding protein A6##D28464|S100A6|6277|S100 calcium binding protein A6##BC001431|S100A6|6277|S100 calcium binding protein A6##BC009017|S100A6|6277|S100 calcium binding protein A6##NM_014624|S100A6|6277|S100 calcium binding protein A6	0.340473	CTCF.p2:4:0.340
chr19	18882542	18882650	reg1016819.p1	8.313	+	AY360171 TSC_hg19_v1_chr19_+_18794489 BC028050 AB527764 CU688378 DQ893310 DQ894228 AB014516	-88073	+	TSC_hg19_v1_chr19_+_18794453 AK024089 AY040323 NM_001098482 NM_015321	-88172	+	TSC_hg19_v1_chr19_+_18747837 AK001940 AK222656 AK294074 NM_018316 BC026319	-134762	+	U75488 TSC_hg19_v1_chr19_-_18888853	6194	-	AB086984 BC033676 BC110847 L32137 BC125092 TSC_hg19_v1_chr19_-_18902115 AK074508 AK223216 AK290595 AK296586 AK297798 AK297814 NM_000095	19501	-	TSC_hg19_v1_chr19_+_18942742 NM_002911 BC039817	60149	+	AY360171|CRTC1|23373|CREB regulated transcription coactivator 1##BC028050|CRTC1|23373|CREB regulated transcription coactivator 1##DQ893310|CRTC1|23373|CREB regulated transcription coactivator 1##DQ894228|CRTC1|23373|CREB regulated transcription coactivator 1##AB014516|CRTC1|23373|CREB regulated transcription coactivator 1##AK024089|CRTC1|23373|CREB regulated transcription coactivator 1##AY040323|CRTC1|23373|CREB regulated transcription coactivator 1##NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1##NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1##AK001940|KLHL26|55295|kelch-like 26 (Drosophila)##AK222656|KLHL26|55295|kelch-like 26 (Drosophila)##AK294074|KLHL26|55295|kelch-like 26 (Drosophila)##NM_018316|KLHL26|55295|kelch-like 26 (Drosophila)##BC026319|KLHL26|55295|kelch-like 26 (Drosophila)##AB086984|COMP|1311|cartilage oligomeric matrix protein##BC033676|COMP|1311|cartilage oligomeric matrix protein##BC110847|COMP|1311|cartilage oligomeric matrix protein##L32137|COMP|1311|cartilage oligomeric matrix protein##BC125092|COMP|1311|cartilage oligomeric matrix protein##AK074508|COMP|1311|cartilage oligomeric matrix protein##AK223216|COMP|1311|cartilage oligomeric matrix protein##AK290595|COMP|1311|cartilage oligomeric matrix protein##AK296586|COMP|1311|cartilage oligomeric matrix protein##AK297798|COMP|1311|cartilage oligomeric matrix protein##AK297814|COMP|1311|cartilage oligomeric matrix protein##NM_000095|COMP|1311|cartilage oligomeric matrix protein##NM_002911|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##BC039817|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)	0.412152	CTCF.p2:-5:0.412
chr5	116790518	116790626	reg1015565.p1	8.313	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-880058	-	TSC_hg19_v1_chr5_+_115898220 D28352	-892348	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-1369851	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	1533666	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	1616239	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	1616593	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.99976	CTCF.p2:5:1.000
chr1	203087085	203087179	reg1015258.p1	8.312	+	NM_002479	-31756	-	BT007233 CU691060 AB463908 EU831793 EU831870 TSC_hg19_v1_chr1_-_203055140 X17651 BC053899	-32006	-	AK126624 NM_015053 BC132923 BC132925 BC144262	-66794	+	AK289928 NM_000674 NM_001048230 AK095060 BC026340	9715	+	TSC_hg19_v1_chr1_+_203097427 AK295584 AK308733 AK293647 AK316106	10313	+	L05606 BC044226 NM_004997 TSC_hg19_v1_chr1_-_203144955	57800	-	NM_002479|MYOG|4656|myogenin (myogenic factor 4)##BT007233|MYOG|4656|myogenin (myogenic factor 4)##EU831793|MYOG|4656|myogenin (myogenic factor 4)##EU831870|MYOG|4656|myogenin (myogenic factor 4)##X17651|MYOG|4656|myogenin (myogenic factor 4)##BC053899|MYOG|4656|myogenin (myogenic factor 4)##AK126624|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##NM_015053|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##BC132923|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##BC132925|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##BC144262|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##AK289928|ADORA1|134|adenosine A1 receptor##NM_000674|ADORA1|134|adenosine A1 receptor##NM_001048230|ADORA1|134|adenosine A1 receptor##AK095060|ADORA1|134|adenosine A1 receptor##BC026340|ADORA1|134|adenosine A1 receptor##AK295584|ADORA1|134|adenosine A1 receptor##AK308733|ADORA1|134|adenosine A1 receptor##L05606|MYBPH|4608|myosin binding protein H##BC044226|MYBPH|4608|myosin binding protein H##NM_004997|MYBPH|4608|myosin binding protein H	0.372891	CTCF.p2:-8:0.373
chr8	6282780	6282924	reg1014012.p1	8.312	+	AK301702 TSC_hg19_v1_chr8_+_6264167	-18680	+	NM_001172574 NM_001172575 NM_024596 BC056195 BC030702 AK308387 TSC_hg19_v1_chr8_+_6264158	-18717	+	TSC_hg19_v1_chr8_-_6264070 AK025595 BC024246	-18778	-	HQ258258 AF187858 AB009865 BC126200 BC126202 BC143902 AF218015 BC022490 AK075219 AK225698 AK290070 AK310171 AK312541 NM_001118887 NM_001118888 NM_001147 TSC_hg19_v1_chr8_-_6420798 AJ289781	137839	-	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	283039	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	283088	+	AK301702|MCPH1|79648|microcephalin 1##NM_001172574|MCPH1|79648|microcephalin 1##NM_001172575|MCPH1|79648|microcephalin 1##NM_024596|MCPH1|79648|microcephalin 1##BC056195|MCPH1|79648|microcephalin 1##BC030702|MCPH1|79648|microcephalin 1##AK308387|MCPH1|79648|microcephalin 1##AK025595|LOC100287015|100287015|uncharacterized LOC100287015##HQ258258|ANGPT2|285|angiopoietin 2##AF187858|ANGPT2|285|angiopoietin 2##AB009865|ANGPT2|285|angiopoietin 2##BC126200|ANGPT2|285|angiopoietin 2##BC126202|ANGPT2|285|angiopoietin 2##BC143902|ANGPT2|285|angiopoietin 2##AF218015|ANGPT2|285|angiopoietin 2##BC022490|ANGPT2|285|angiopoietin 2##AK075219|ANGPT2|285|angiopoietin 2##AK225698|ANGPT2|285|angiopoietin 2##AK290070|ANGPT2|285|angiopoietin 2##AK310171|ANGPT2|285|angiopoietin 2##AK312541|ANGPT2|285|angiopoietin 2##NM_001118887|ANGPT2|285|angiopoietin 2##NM_001118888|ANGPT2|285|angiopoietin 2##NM_001147|ANGPT2|285|angiopoietin 2##AJ289781|ANGPT2|285|angiopoietin 2##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	0.984566	CTCF.p2:-35:0.985
chr1	150253759	150253883	reg1016514.p1	8.311	+	AX770999 NM_024579 AX770997 AK026874 BC017761 AM392820 AM392958 AM393066 AM393249 AM393463 AM393548 AM393619 AM393652 AM393742 CU676046	-8620	+	TSC_hg19_v1_chr1_-_150241417 AY358951 AK300640 AK075452 AK298832 AK307358 NM_001077628 NM_001243771 NM_001243772 NM_016022	-12313	-	CU676022 AF508787 AY113698 AY113699 AF151835 AK075295 AX775955 BC017699 TSC_hg19_v1_chr1_-_150241368 BC008732 BC001230 BC015568 AK297680 AK298876 AK027879 AK314490 AX775957 BC020590 BC009501	-12517	-	BC047238 NM_144697 AK098755 AK315397	1422	+	TSC_hg19_v1_chr1_+_150266280 NM_018997 NM_031901 AK289467 AB049955 BC004566 BC006554 U79258	12479	+	TSC_hg19_v1_chr1_+_150293934 NM_004698	40104	+	NM_024579|C1orf54|79630|chromosome 1 open reading frame 54##AX770997|C1orf54|79630|chromosome 1 open reading frame 54##AK026874|C1orf54|79630|chromosome 1 open reading frame 54##BC017761|C1orf54|79630|chromosome 1 open reading frame 54##AM392820|C1orf54|79630|chromosome 1 open reading frame 54##AM392958|C1orf54|79630|chromosome 1 open reading frame 54##AM393066|C1orf54|79630|chromosome 1 open reading frame 54##AM393249|C1orf54|79630|chromosome 1 open reading frame 54##AM393463|C1orf54|79630|chromosome 1 open reading frame 54##AM393548|C1orf54|79630|chromosome 1 open reading frame 54##AM393619|C1orf54|79630|chromosome 1 open reading frame 54##AM393652|C1orf54|79630|chromosome 1 open reading frame 54##AM393742|C1orf54|79630|chromosome 1 open reading frame 54##AY358951|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK300640|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK075452|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK298832|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK307358|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##NM_001077628|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##NM_001243771|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##NM_001243772|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##NM_016022|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AX775955|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AX775957|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC047238|C1orf51|148523|chromosome 1 open reading frame 51##NM_144697|C1orf51|148523|chromosome 1 open reading frame 51##AK098755|C1orf51|148523|chromosome 1 open reading frame 51##AK315397|C1orf51|148523|chromosome 1 open reading frame 51##NM_018997|MRPS21|54460|mitochondrial ribosomal protein S21##NM_031901|MRPS21|54460|mitochondrial ribosomal protein S21##AK289467|MRPS21|54460|mitochondrial ribosomal protein S21##AB049955|MRPS21|54460|mitochondrial ribosomal protein S21##BC004566|MRPS21|54460|mitochondrial ribosomal protein S21##BC006554|MRPS21|54460|mitochondrial ribosomal protein S21##U79258|MRPS21|54460|mitochondrial ribosomal protein S21##NM_004698|PRPF3|9129|PRP3 pre-mRNA processing factor 3 homolog (S. cerevisiae)	0.958198	CTCF.p2:8:0.958
chr3	178787079	178787218	reg1014506.p2	8.311	+	AF209747 NM_005832	-510596	+	BC017825 NM_181361	-532925	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1872089	-	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	2417	-	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	2478	-	TSC_hg19_v1_chr3_+_178866144 NM_006218 AK292940	79090	+	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3##NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	0.626462	CTCF.p2:-13:0.626
chr5	142783604	142783727	reg1010376.p2	8.311	+	TSC_hg19_v1_chr5_-_142783310 AJ888004	-298	-	TSC_hg19_v1_chr5_-_142783232 NM_000176 NM_001020825 NM_001024094 NM_001204258 NM_001204259 NM_001204260 NM_001204261 NM_001204262 NM_001204263 NM_001204264 NM_001204265 U01351	-426	-	BC015610 TSC_hg19_v1_chr5_-_142783214	-454	-	TSC_hg19_v1_chr5_-_142784036 AK302050 NM_001018076	367	-	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	501	-	NM_001018074 NM_001018075 NM_001018077	31411	-	AJ888004|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_000176|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001020825|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001024094|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204258|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204259|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204260|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204261|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204262|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204263|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204264|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204265|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##U01351|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.164662	
chr9	118353893	118354033	reg1015331.p1	8.311	+	AB022761 NM_017418	-449867	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-473490	-	AK313619 NM_001244 NM_001252290	-661089	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	562107	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	1095499	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	1095643	+	AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32	0.997983	CTCF.p2:0:0.998
chr9	126885232	126885364	reg1016397.p2	8.311	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-111227	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-111415	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-192987	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	134712	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	134947	+	TSC_hg19_v1_chr9_+_127020255 AB026289	134966	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.566383	CTCF.p2:9:0.566
chr11	47201187	47201321	reg1018464.p1	8.310	+	NM_001242832 NM_032389	-2579	-	TSC_hg19_v1_chr11_-_47198431 AK315992 AK098324	-2821	-	AK301785 AL834337 EU832352 EU832437 AK300347 BC036823 AK027482 TSC_hg19_v1_chr11_-_47198413 AK304541 BC030148	-2855	-	AK300968 AK000577 NM_001184975	6174	-	BC007914 AF149825 TSC_hg19_v1_chr11_-_47207959 AF242530 AK300658 BC011889 NM_001184974 NM_016223	6728	-	NM_000107 U18300 TSC_hg19_v1_chr11_+_47236524 AK313262 BC050455 AK091640 AX747106 BC000093 AB527602 AB107037 AB107038 AB107039 AB107040 BT007139 CU674030 DQ890719	35335	+	NM_001242832|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_032389|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK315992|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK098324|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK301785|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AL834337|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832352|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832437|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300347|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC036823|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK027482|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK304541|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC030148|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300968|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AK000577|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##NM_001184975|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##BC007914|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AF149825|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AF242530|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AK300658|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##BC011889|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##NM_001184974|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##NM_016223|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##NM_000107|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##U18300|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AK313262|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BC050455|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AK091640|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BC000093|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107037|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107038|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107039|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107040|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BT007139|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##DQ890719|DDB2|1643|damage-specific DNA binding protein 2, 48kDa	0.080078	
chr11	64257411	64257525	reg1015039.p1	8.310	+	TSC_hg19_v1_chr11_+_64126642 AK223561 NM_001006944 NM_003942 AJ010119 AK292163 AK313567 BC047896 AK298507 BC028079 CU690526 AF074715	-130737	+	TSC_hg19_v1_chr11_+_64120348 AK126728	-137109	+	TSC_hg19_v1_chr11_+_64107692 BC151218 BC151222 NM_032251 AK090436 BC140822 BC140824 BC141866	-149766	+	AK290791 BC034384 NM_018484 AK129930	65657	+	AB050269 NM_144585 NM_153378	100813	+	BC043422 TSC_hg19_v1_chr11_-_64377473	119934	-	AK223561|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_001006944|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_003942|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AJ010119|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK292163|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK313567|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC047896|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK298507|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC028079|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AF074715|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK126728|CCDC88B|283234|coiled-coil domain containing 88B##BC151218|CCDC88B|283234|coiled-coil domain containing 88B##BC151222|CCDC88B|283234|coiled-coil domain containing 88B##NM_032251|CCDC88B|283234|coiled-coil domain containing 88B##AK090436|CCDC88B|283234|coiled-coil domain containing 88B##BC140822|CCDC88B|283234|coiled-coil domain containing 88B##BC140824|CCDC88B|283234|coiled-coil domain containing 88B##BC141866|CCDC88B|283234|coiled-coil domain containing 88B##AK290791|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##BC034384|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##NM_018484|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AK129930|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AB050269|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_144585|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_153378|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12	0.841188	CTCF.p2:-7:0.841
chr2	43056110	43056214	reg1015621.p1	8.310	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-36411	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-64862	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-260265	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	397183	-	TSC_hg19_v1_chr2_-_43453736 BC020369	397568	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	397580	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.999118	CTCF.p2:4:0.999
chr4	48018413	48018567	reg1017179.p2	8.310	+	AK292021 NM_000087	-3530	-	M84741 NM_001142564 S42457	-35001	-	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	-101895	-	X64802 TSC_hg19_v1_chr4_-_48018662	147	-	TSC_hg19_v1_chr4_+_48018788 BC067881 CR749484 NM_207330 AK095299	313	+	BC017829 L27071 NM_003328	117768	-	AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1##M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1##S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1##AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1##BC067881|NIPAL1|152519|NIPA-like domain containing 1##CR749484|NIPAL1|152519|NIPA-like domain containing 1##NM_207330|NIPAL1|152519|NIPA-like domain containing 1##AK095299|NIPAL1|152519|NIPA-like domain containing 1##BC017829|TXK|7294|TXK tyrosine kinase##L27071|TXK|7294|TXK tyrosine kinase##NM_003328|TXK|7294|TXK tyrosine kinase	0.084997	
chrX	137857794	137857934	reg1017336.p1	8.310	+	AF100144 NM_033642	-36350	-	BC012347 NM_004114 TSC_hg19_v1_chrX_-_137793839	-64027	-	AF100143 TSC_hg19_v1_chrX_-_137793504 AK289960 BC034340	-64410	-	NM_001139502	91852	-	AF108756 AK316170 TSC_hg19_v1_chrX_-_138286506	428606	-	AF199613 TSC_hg19_v1_chrX_-_138287166	429295	-	AF100144|FGF13|2258|fibroblast growth factor 13##NM_033642|FGF13|2258|fibroblast growth factor 13##BC012347|FGF13|2258|fibroblast growth factor 13##NM_004114|FGF13|2258|fibroblast growth factor 13##AF100143|FGF13|2258|fibroblast growth factor 13##AK289960|FGF13|2258|fibroblast growth factor 13##BC034340|FGF13|2258|fibroblast growth factor 13##NM_001139502|FGF13|2258|fibroblast growth factor 13##AF108756|FGF13|2258|fibroblast growth factor 13##AK316170|FGF13|2258|fibroblast growth factor 13##AF199613|FGF13|2258|fibroblast growth factor 13	0.990178	CTCF.p2:-7:0.990
chr11	67559857	67559972	reg1015676.p2	8.309	+	TSC_hg19_v1_chr11_-_67450557 AB055770	-109368	-	BC007685 NM_001031615	-111230	-	TSC_hg19_v1_chr11_-_67442086 AK309277 NM_000695 AK092464	-117783	-	TSC_hg19_v1_chr11_-_67572800 BC063712 BC110365	12838	-	TSC_hg19_v1_chr11_-_67771527 BC101568 BC105104 BC025669 AJ422142 AJ271326 BC092472 BC033623 NM_030930	211653	-	TSC_hg19_v1_chr11_+_67776039 EF411198 NM_001161473	216117	+	AB055770|RPL37|6167|ribosomal protein L37##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC063712|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC110365|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC101568|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC105104|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC025669|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ422142|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ271326|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC092472|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC033623|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##NM_030930|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##EF411198|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001161473|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1	0.580127	CTCF.p2:-9:0.580
chr19	39543042	39543146	reg1013574.p1	8.309	+	TSC_hg19_v1_chr19_-_39523185 BC030060 AF436061 BC014527 NM_178820	-19861	-	CU677033 TSC_hg19_v1_chr19_-_39522905	-20195	-	BC012385 AF386743 NM_024907	-76760	-	AK131245 NM_001004318	31850	+	TSC_hg19_v1_chr19_+_39616436 AK294586 NM_001014831 NM_001014832 NM_001014834 NM_001014835 NM_005884 AK293517 AK291839 AX775863 AX775865 AK300632 BC002921 AX775871 BC034511 AK304651 BC011368 AL834236 AX775867 AX775869 BC025282 AF005046 AB032968	73351	+	BC092493 AK123941 BC067874 NM_001001414 TSC_hg19_v1_chr19_+_39687603	144508	+	BC030060|FBXO27|126433|F-box protein 27##AF436061|FBXO27|126433|F-box protein 27##BC014527|FBXO27|126433|F-box protein 27##NM_178820|FBXO27|126433|F-box protein 27##BC012385|FBXO17|115290|F-box protein 17##AF386743|FBXO17|115290|F-box protein 17##NM_024907|FBXO17|115290|F-box protein 17##AK131245|PAPL|390928|iron/zinc purple acid phosphatase-like protein##NM_001004318|PAPL|390928|iron/zinc purple acid phosphatase-like protein##AK294586|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014831|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014832|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014834|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014835|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_005884|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK293517|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK291839|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775863|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775865|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK300632|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC002921|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775871|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC034511|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK304651|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC011368|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AL834236|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775867|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775869|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC025282|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AF005046|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AB032968|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC092493|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##AK123941|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##BC067874|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##NM_001001414|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)	0.999533	CTCF.p2:-20:1.000
chr2	63715386	63715492	reg1017067.p1	8.309	+	NM_014562 TSC_hg19_v1_chr2_+_63277964 AK095680 AK297308 BC007621	-437474	+	NM_001199770	-438248	+	BC029477 NM_001142614	-781409	+	TSC_hg19_v1_chr2_-_63815560 AK310290	100101	-	TSC_hg19_v1_chr2_-_63815583 BX538331 AK055030 AL833623	100178	-	NM_005917	100303	+	NM_014562|OTX1|5013|orthodenticle homeobox 1##AK095680|OTX1|5013|orthodenticle homeobox 1##AK297308|OTX1|5013|orthodenticle homeobox 1##BC007621|OTX1|5013|orthodenticle homeobox 1##NM_001199770|OTX1|5013|orthodenticle homeobox 1##BC029477|EHBP1|23301|EH domain binding protein 1##NM_001142614|EHBP1|23301|EH domain binding protein 1##AK310290|WDPCP|51057|WD repeat containing planar cell polarity effector##BX538331|WDPCP|51057|WD repeat containing planar cell polarity effector##AK055030|WDPCP|51057|WD repeat containing planar cell polarity effector##AL833623|WDPCP|51057|WD repeat containing planar cell polarity effector##NM_005917|MDH1|4190|malate dehydrogenase 1, NAD (soluble)	0.983638	CTCF.p2:6:0.984
chr1	92927422	92927553	reg1015428.p2	8.308	+	BC039014 NM_024813 TSC_hg19_v1_chr1_+_92764615 AK023212 BC031070 AK225054 CU691638	-162912	+	TSC_hg19_v1_chr1_-_92764545 AJ302735 AJ347709 BC001257 AK295971 U73704 NM_053274	-162954	-	NM_001012425 BC130499 BC171742	-243912	+	AB463058 DQ891273 DQ894461 AB209606 BC074866 BC074867 TSC_hg19_v1_chr1_-_92949213	21642	-	AK313876 NM_001127215 TSC_hg19_v1_chr1_-_92949370	21892	-	TSC_hg19_v1_chr1_-_92949508 AK123009	22045	-	BC039014|RPAP2|79871|RNA polymerase II associated protein 2##NM_024813|RPAP2|79871|RNA polymerase II associated protein 2##AK023212|RPAP2|79871|RNA polymerase II associated protein 2##BC031070|RPAP2|79871|RNA polymerase II associated protein 2##AK225054|RPAP2|79871|RNA polymerase II associated protein 2##AJ302735|GLMN|11146|glomulin, FKBP associated protein##AJ347709|GLMN|11146|glomulin, FKBP associated protein##BC001257|GLMN|11146|glomulin, FKBP associated protein##AK295971|GLMN|11146|glomulin, FKBP associated protein##U73704|GLMN|11146|glomulin, FKBP associated protein##NM_053274|GLMN|11146|glomulin, FKBP associated protein##NM_001012425|C1orf146|388649|chromosome 1 open reading frame 146##BC130499|C1orf146|388649|chromosome 1 open reading frame 146##BC171742|C1orf146|388649|chromosome 1 open reading frame 146##DQ891273|GFI1|2672|growth factor independent 1 transcription repressor##DQ894461|GFI1|2672|growth factor independent 1 transcription repressor##AB209606|GFI1|2672|growth factor independent 1 transcription repressor##BC074866|GFI1|2672|growth factor independent 1 transcription repressor##BC074867|GFI1|2672|growth factor independent 1 transcription repressor##AK313876|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127215|GFI1|2672|growth factor independent 1 transcription repressor##AK123009|GFI1|2672|growth factor independent 1 transcription repressor	0.060012	
chr3	107657024	107657171	reg1016185.p1	8.308	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-415248	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-560787	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-697505	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	152776	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	284195	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	358304	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.982262	CTCF.p2:-18:0.982
chr3	121714525	121714643	reg1015350.p2	8.308	+	NM_001145998 NM_021082 AK289820 AK296895 AK302002 AK304189 BC020743 BC044572 BC038445 S78203	-101352	+	AF217516 NM_018456 TSC_hg19_v1_chr3_+_121554083 BC014589 AY049020 BC014209 AF517829 AK301560 AB528527 CU676923 DQ892648 DQ895887	-160504	+	TSC_hg19_v1_chr3_-_121553908 AB062481 AY714228 NM_001023570 NM_001023571	-160657	-	AY672837 AY672839 BC044240 AY134857 TSC_hg19_v1_chr3_-_121741095 AK129974 NM_001199799 NM_001199800 NM_175924	26463	-	NM_001206924 NM_001206925 NM_175862 AK294663 AK301237 AK316203 BC040261 L25259 AK291497 AK313103	59670	+	NM_006889 NM_176892 U04343	82138	+	NM_001145998|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##NM_021082|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK289820|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK296895|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK302002|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK304189|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC020743|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC044572|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC038445|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##S78203|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AF217516|EAF2|55840|ELL associated factor 2##NM_018456|EAF2|55840|ELL associated factor 2##BC014589|EAF2|55840|ELL associated factor 2##AY049020|EAF2|55840|ELL associated factor 2##BC014209|EAF2|55840|ELL associated factor 2##AF517829|EAF2|55840|ELL associated factor 2##AK301560|EAF2|55840|ELL associated factor 2##DQ892648|EAF2|55840|ELL associated factor 2##DQ895887|EAF2|55840|ELL associated factor 2##AB062481|IQCB1|9657|IQ motif containing B1##AY714228|IQCB1|9657|IQ motif containing B1##NM_001023570|IQCB1|9657|IQ motif containing B1##NM_001023571|IQCB1|9657|IQ motif containing B1##AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1##BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199799|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199800|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001206924|CD86|942|CD86 molecule##NM_001206925|CD86|942|CD86 molecule##NM_175862|CD86|942|CD86 molecule##AK294663|CD86|942|CD86 molecule##AK301237|CD86|942|CD86 molecule##AK316203|CD86|942|CD86 molecule##BC040261|CD86|942|CD86 molecule##L25259|CD86|942|CD86 molecule##AK291497|CD86|942|CD86 molecule##AK313103|CD86|942|CD86 molecule##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule	0.995611	CTCF.p2:-10:0.996
chr2	26074903	26075032	reg1015263.p1	8.307	+	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	-178566	-	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	-509505	-	TSC_hg19_v1_chr2_-_25565353 AB208833	-509604	-	AB385496 TSC_hg19_v1_chr2_-_26101159	26162	-	TSC_hg19_v1_chr2_-_26101174 AB084279	26206	-	TSC_hg19_v1_chr2_-_26101321 AB051472 NM_018263	26347	-	AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta##BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)##AB051472|ASXL2|55252|additional sex combs like 2 (Drosophila)##NM_018263|ASXL2|55252|additional sex combs like 2 (Drosophila)	0.943828	CTCF.p2:9:0.944
chr4	190968884	190969036	reg1017192.p1	8.307	+	BC144572 AY714545 NM_001005217 NM_001199232	-20557	-	TSC_hg19_v1_chr4_+_190862048 CU691066	-106855	+	L76159 NM_004477 AK291890 BC053997 TSC_hg19_v1_chr4_+_190862026	-106953	+	NM_012147	19906	+	NM_001127388 NM_001127389 NM_001164467 NM_001177376	23132	+	NM_001127386 NM_001127388 NM_001127389 NM_001164467 NM_012147	26460	+	BC144572|FRG2|448831|FSHD region gene 2##AY714545|FRG2|448831|FSHD region gene 2##NM_001005217|FRG2|448831|FSHD region gene 2##NM_001199232|LOC100288255|100288255|FSHD region gene 2-like##L76159|FRG1|2483|FSHD region gene 1##NM_004477|FRG1|2483|FSHD region gene 1##AK291890|FRG1|2483|FSHD region gene 1##BC053997|FRG1|2483|FSHD region gene 1##NM_012147|DUX2|26583|double homeobox 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_001177376|DUX4L4|441056|double homeobox 4 like 4##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_012147|DUX2|26583|double homeobox 2	0.996146	CTCF.p2:-10:0.996
chr5	112947826	112947956	reg1018724.p1	8.307	+	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	-98495	+	AK128596 NM_001085377	-123365	-	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	-177259	-	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	750158	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	750570	+	BC015371 NM_170775 BC040722	821358	+	AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2##AK128596|MCC|4163|mutated in colorectal cancers##NM_001085377|MCC|4163|mutated in colorectal cancers##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	0.498806	CTCF.p2:-20:0.499
chr9	77185998	77186087	reg1011777.p1	8.307	+	NM_006914 BC051830 Y08639	-73768	+	TSC_hg19_v1_chr9_+_75766797 BC001275	-1419239	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	-1419264	+	AY333284 NM_001177311	316220	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	316692	-	AF350881 AK057748 NM_017662	316967	-	NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B##BC001275|ANXA1|301|annexin A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##AY333284|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177311|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF350881|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AK057748|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_017662|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	0.014608	
chr11	8120970	8121098	reg1017552.p1	8.305	+	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-18235	+	NM_003320 U82467	-60855	+	AK293528 TSC_hg19_v1_chr11_+_8040820	-80229	+	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	69529	-	BC069752 BC069793 M26682 NM_002315	164318	-	AK093251 AX748014 BC031231 NM_030906	494423	-	NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##NM_003320|TUB|7275|tubby homolog (mouse)##U82467|TUB|7275|tubby homolog (mouse)##AK293528|TUB|7275|tubby homolog (mouse)##AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33	0.998053	CTCF.p2:9:0.998
chr18	51919068	51919178	reg1014251.p2	8.305	+	BX640877 NM_173529	-33953	+	AB528241 AF480305 NM_139171	-38181	-	NM_007195 TSC_hg19_v1_chr18_+_51795943 AK301578 AF140501 BC032617 BC032662 AL136670 AF245438 AK093688 AB463184 AM392978 DQ890893 DQ896811 CU689468	-123183	+	AK096425 NM_173629	339266	+	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	576615	+	AK058097 NM_001143829	706155	-	BX640877|C18orf54|162681|chromosome 18 open reading frame 54##NM_173529|C18orf54|162681|chromosome 18 open reading frame 54##AF480305|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_139171|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_007195|POLI|11201|polymerase (DNA directed) iota##AK301578|POLI|11201|polymerase (DNA directed) iota##AF140501|POLI|11201|polymerase (DNA directed) iota##BC032617|POLI|11201|polymerase (DNA directed) iota##BC032662|POLI|11201|polymerase (DNA directed) iota##AL136670|POLI|11201|polymerase (DNA directed) iota##AF245438|POLI|11201|polymerase (DNA directed) iota##AK093688|POLI|11201|polymerase (DNA directed) iota##AM392978|POLI|11201|polymerase (DNA directed) iota##DQ890893|POLI|11201|polymerase (DNA directed) iota##DQ896811|POLI|11201|polymerase (DNA directed) iota##AK096425|C18orf26|284254|chromosome 18 open reading frame 26##NM_173629|C18orf26|284254|chromosome 18 open reading frame 26##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family##AK058097|CCDC68|80323|coiled-coil domain containing 68##NM_001143829|CCDC68|80323|coiled-coil domain containing 68	0.961816	CTCF.p2:-10:0.962
chr2	232259514	232259653	reg1014542.p2	8.305	+	TSC_hg19_v1_chr2_+_232120778 AB055779	-138805	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-196189	+	AY219922 TSC_hg19_v1_chr2_+_232063378	-196205	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	839	+	AK001314 TSC_hg19_v1_chr2_-_232326464	66846	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	69552	-	AY929062|ARMC9|80210|armadillo repeat containing 9##AY219922|ARMC9|80210|armadillo repeat containing 9##AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK001314|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin	0.109225	
chr5	131862362	131862501	reg1004209.p1	8.305	+	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	-35950	-	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-115803	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-156923	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	16761	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	30209	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	131459	+	X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13	0.948255	CTCF.p2:-36:0.948
chr7	103214065	103214183	reg1015715.p2	8.305	+	TSC_hg19_v1_chr7_-_103086511 AF523354 AY256823 AY256824 AY256825 AK126898 NM_001167962 NM_198999 NM_206883 NM_206884 NM_206885	-127557	-	NM_001204453 NM_002803 TSC_hg19_v1_chr7_+_102988118 D11094 AK298821 AB075520 AK312648 AK298529 BC002589 AB527557 CU678056 EU446703	-226060	+	BC125057 BC139751 BC046351 X98260 TSC_hg19_v1_chr7_-_102985295 BC012376 BC062703 BC056682 BC032854 NM_001129887 NM_014377	-228931	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	415872	-	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	634307	-	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	755094	+	AF523354|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256823|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256824|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256825|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AK126898|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_001167962|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_198999|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206883|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206884|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206885|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_001204453|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##NM_002803|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##D11094|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK298821|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AB075520|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK312648|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK298529|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##BC002589|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##EU446703|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##BC125057|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC139751|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC046351|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##X98260|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC012376|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC062703|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC056682|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC032854|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_001129887|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_014377|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	0.96885	CTCF.p2:-23:0.969
chr7	27250071	27250202	reg1018665.p1	8.305	+	BC075791 NM_000522 TSC_hg19_v1_chr7_-_27239748	-10392	-	TSC_hg19_v1_chr7_+_27225046 BC025338	-25103	+	AB464571 EU446480 TSC_hg19_v1_chr7_-_27224852 AK313921 BC040948 NM_005523 BC033706	-25295	-	AK299188 NM_001989	32027	+	TSC_hg19_v1_chr7_-_27702469 AF529362 DQ894677 AK316605 BC020167 AB050000 BC032324	452292	-	TSC_hg19_v1_chr7_-_27702556 AK311650 NM_152740	452441	-	BC075791|HOXA13|3209|homeobox A13##NM_000522|HOXA13|3209|homeobox A13##BC025338|HOXA11-AS1|221883|HOXA11 antisense RNA 1 (non-protein coding)##EU446480|HOXA11|3207|homeobox A11##AK313921|HOXA11|3207|homeobox A11##BC040948|HOXA11|3207|homeobox A11##NM_005523|HOXA11|3207|homeobox A11##BC033706|HOXA11|3207|homeobox A11##AK299188|EVX1|2128|even-skipped homeobox 1##NM_001989|EVX1|2128|even-skipped homeobox 1##AF529362|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##DQ894677|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AK316605|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##BC020167|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AB050000|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##BC032324|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##NM_152740|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase	0.0	
chr13	108807953	108808087	reg1015475.p2	8.304	+	NM_001080396	-288561	-	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	-1587535	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	-1620671	-	NM_002312 X83441	59109	-	AK292419 AK314844 BC037491 NM_206937	59855	-	TSC_hg19_v1_chr13_-_108870697 BX648833 NM_001098268	62677	-	NM_001080396|FAM155A|728215|family with sequence similarity 155, member A##BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##NM_002312|LIG4|3981|ligase IV, DNA, ATP-dependent##X83441|LIG4|3981|ligase IV, DNA, ATP-dependent##AK292419|LIG4|3981|ligase IV, DNA, ATP-dependent##AK314844|LIG4|3981|ligase IV, DNA, ATP-dependent##BC037491|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_206937|LIG4|3981|ligase IV, DNA, ATP-dependent##BX648833|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_001098268|LIG4|3981|ligase IV, DNA, ATP-dependent	0.999095	CTCF.p2:13:0.999
chr7	50747072	50747209	reg1017846.p1	8.304	+	M88700 TSC_hg19_v1_chr7_-_50633103 AK298392 NM_001082971	-114043	-	AJ310724 BC000485 BC008366 M76180 AK298321 NM_000790 NM_001242886 NM_001242887 NM_001242888 NM_001242889 NM_001242890 TSC_hg19_v1_chr7_-_50628769	-118381	-	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	-229086	-	NM_001001550 U66065 U69276	25857	-	AF000017 AB000731 AF001534 NM_001001549 NM_005311 U34355	52893	-	D86962 TSC_hg19_v1_chr7_-_50860699	113549	-	M88700|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298392|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001082971|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AJ310724|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC000485|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC008366|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##M76180|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298321|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_000790|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242886|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242887|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242888|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242889|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242890|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1##NM_001001550|GRB10|2887|growth factor receptor-bound protein 10##U66065|GRB10|2887|growth factor receptor-bound protein 10##U69276|GRB10|2887|growth factor receptor-bound protein 10##AF000017|GRB10|2887|growth factor receptor-bound protein 10##AB000731|GRB10|2887|growth factor receptor-bound protein 10##AF001534|GRB10|2887|growth factor receptor-bound protein 10##NM_001001549|GRB10|2887|growth factor receptor-bound protein 10##NM_005311|GRB10|2887|growth factor receptor-bound protein 10##U34355|GRB10|2887|growth factor receptor-bound protein 10##D86962|GRB10|2887|growth factor receptor-bound protein 10	0.564712	CTCF.p2:8:0.565
chr12	133345086	133345242	reg1016863.p2	8.303	+	TSC_hg19_v1_chr12_-_133338419 BC043157 NM_015114	-6744	-	AK025933 TSC_hg19_v1_chr12_-_133306584	-38606	-	TSC_hg19_v1_chr12_+_133287427 NM_001170543 NM_001170544 NM_138575 EU249757 BC008196	-57728	+	BC048203 TSC_hg19_v1_chr12_-_133372555	27393	-	TSC_hg19_v1_chr12_-_133404955 D63997 AB027133	59815	-	TSC_hg19_v1_chr12_-_133405400 NM_005895	60134	-	BC043157|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##NM_015114|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##AK025933|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##NM_001170543|PGAM5|192111|phosphoglycerate mutase family member 5##NM_001170544|PGAM5|192111|phosphoglycerate mutase family member 5##NM_138575|PGAM5|192111|phosphoglycerate mutase family member 5##EU249757|PGAM5|192111|phosphoglycerate mutase family member 5##BC008196|PGAM5|192111|phosphoglycerate mutase family member 5##D63997|GOLGA3|2802|golgin A3##AB027133|GOLGA3|2802|golgin A3##NM_005895|GOLGA3|2802|golgin A3	0.998373	CTCF.p2:-7:0.998
chr4	181587495	181587591	reg1017301.p2	8.303	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-3223900	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-3223950	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-3224002	-	TSC_hg19_v1_chr4_+_183065111 AK308489	1477582	+	NM_001080477 HE578284 HE578285	1657611	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	2250987	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.992746	CTCF.p2:7:0.993
chr13	25950023	25950148	reg1011916.p1	8.302	+	TSC_hg19_v1_chr13_+_25946121 AK127263 NM_016529	-3933	+	NM_001008564 NM_014089 TSC_hg19_v1_chr13_+_25875768 AK123955 AK303409 AB007870 AK302946 BC001104 CU674550	-74298	+	TSC_hg19_v1_chr13_-_25861621 AL832017 AK093237 AX748005 NM_004685	-88430	-	TSC_hg19_v1_chr13_+_26042926 AK126031	92844	+	AK302980 TSC_hg19_v1_chr13_+_26042965	92880	+	BC132898 BC137092 AY358775 NM_001007538	675095	-	AK127263|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##NM_016529|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##NM_001008564|NUPL1|9818|nucleoporin like 1##NM_014089|NUPL1|9818|nucleoporin like 1##AK123955|NUPL1|9818|nucleoporin like 1##AK303409|NUPL1|9818|nucleoporin like 1##AB007870|NUPL1|9818|nucleoporin like 1##AK302946|NUPL1|9818|nucleoporin like 1##BC001104|NUPL1|9818|nucleoporin like 1##AL832017|MTMR6|9107|myotubularin related protein 6##AK093237|MTMR6|9107|myotubularin related protein 6##NM_004685|MTMR6|9107|myotubularin related protein 6##AK126031|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK302980|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##BC132898|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##BC137092|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AY358775|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##NM_001007538|SHISA2|387914|shisa homolog 2 (Xenopus laevis)	0.998955	CTCF.p2:-5:0.999
chr4	186989298	186989421	reg1017721.p1	8.302	+	NM_021069	-111490	-	AK295742 AK056628 BC035329 AB018320 TSC_hg19_v1_chr4_-_186877527	-111887	-	AK225327 AF049884 TSC_hg19_v1_chr4_-_186733388 NM_003603 NM_001145670	-255969	-	BC017954 NM_003265 AK314208 BC068487 BC094737 TSC_hg19_v1_chr4_+_186990309 BC059372 BC096333 BC096334 BC096335 DQ445682 U88879	970	+	NM_015398 TSC_hg19_v1_chr4_+_187065998 BC142992 BC110816	76686	+	NM_001006655 AF173894	80999	+	NM_021069|SORBS2|8470|sorbin and SH3 domain containing 2##AK295742|SORBS2|8470|sorbin and SH3 domain containing 2##AK056628|SORBS2|8470|sorbin and SH3 domain containing 2##BC035329|SORBS2|8470|sorbin and SH3 domain containing 2##AB018320|SORBS2|8470|sorbin and SH3 domain containing 2##AK225327|SORBS2|8470|sorbin and SH3 domain containing 2##AF049884|SORBS2|8470|sorbin and SH3 domain containing 2##NM_003603|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145670|SORBS2|8470|sorbin and SH3 domain containing 2##BC017954|TLR3|7098|toll-like receptor 3##NM_003265|TLR3|7098|toll-like receptor 3##AK314208|TLR3|7098|toll-like receptor 3##BC068487|TLR3|7098|toll-like receptor 3##BC094737|TLR3|7098|toll-like receptor 3##BC059372|TLR3|7098|toll-like receptor 3##BC096333|TLR3|7098|toll-like receptor 3##BC096334|TLR3|7098|toll-like receptor 3##BC096335|TLR3|7098|toll-like receptor 3##DQ445682|TLR3|7098|toll-like receptor 3##U88879|TLR3|7098|toll-like receptor 3##NM_015398|FAM149A|25854|family with sequence similarity 149, member A##BC142992|FAM149A|25854|family with sequence similarity 149, member A##BC110816|FAM149A|25854|family with sequence similarity 149, member A##NM_001006655|FAM149A|25854|family with sequence similarity 149, member A##AF173894|FAM149A|25854|family with sequence similarity 149, member A	0.902096	CTCF.p2:-2:0.902
chr2	179779132	179779238	reg1014816.p1	8.301	+	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-107082	-	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	-119484	-	TSC_hg19_v1_chr2_+_179387947 AK093733	-391225	+	AL832777 NM_173648	135600	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	350220	-	AK057999 NM_001113398	648129	-	X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##X98114|TTN|7273|titin##X98115|TTN|7273|titin##AK093733|LOC100506866|100506866|uncharacterized LOC100506866##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B	0.703154	CTCF.p2:-6:0.703
chr3	140998249	140998379	reg1016951.p1	8.301	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	-47628	+	AF403029 BC008324 NM_080862 AK056367	-227557	+	TSC_hg19_v1_chr3_+_140770412 BC051354	-227836	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	44742	+	TSC_hg19_v1_chr3_+_141087345 AK311501	89043	+	AK311479 TSC_hg19_v1_chr3_+_141105293	106974	+	AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38	0.867196	CTCF.p2:20:0.867
chr11	58397476	58397599	reg1014232.p2	8.300	+	BC069167 NM_000614 BC068030 AK314118 BC074963 BC074964 CU686605 S72921	-7352	+	TSC_hg19_v1_chr11_+_58346697 AB056107 AB057443 CU690828	-50842	+	TSC_hg19_v1_chr11_+_58346591 BC051743 NM_001197051 NM_053023	-50954	+	AF023466 BC009785 NM_005838 NM_201648	101870	-	BC021682 NM_145016 BC016789	214451	-	NM_001220494 AK300479 BC008353	297600	+	BC069167|CNTF|1270|ciliary neurotrophic factor##NM_000614|CNTF|1270|ciliary neurotrophic factor##BC068030|CNTF|1270|ciliary neurotrophic factor##AK314118|CNTF|1270|ciliary neurotrophic factor##BC074963|CNTF|1270|ciliary neurotrophic factor##BC074964|CNTF|1270|ciliary neurotrophic factor##S72921|CNTF|1270|ciliary neurotrophic factor##AB056107|ZFP91|80829|zinc finger protein 91 homolog (mouse)##AB057443|ZFP91-CNTF|386607|ZFP91-CNTF readthrough##BC051743|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_001197051|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_053023|ZFP91|80829|zinc finger protein 91 homolog (mouse)##AF023466|GLYAT|10249|glycine-N-acyltransferase##BC009785|GLYAT|10249|glycine-N-acyltransferase##NM_005838|GLYAT|10249|glycine-N-acyltransferase##NM_201648|GLYAT|10249|glycine-N-acyltransferase##BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1	0.0	
chr10	81539216	81539375	reg1016843.p1	8.299	+	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	-168591	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	-219144	-	BC070048 NM_001099692	-266939	+	BC022318 NM_003019	169565	-	TSC_hg19_v1_chr10_+_81838420 AK222536 AK023325 BC022252 NM_025125 CR457310	299141	+	BC066348 BC090922 NM_001012973	352962	+	AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##BC022318|SFTPD|6441|surfactant protein D##NM_003019|SFTPD|6441|surfactant protein D##AK222536|FAM213A|80195|family with sequence similarity 213, member A##AK023325|FAM213A|80195|family with sequence similarity 213, member A##BC022252|FAM213A|80195|family with sequence similarity 213, member A##NM_025125|FAM213A|80195|family with sequence similarity 213, member A##CR457310|FAM213A|80195|family with sequence similarity 213, member A##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9	0.988342	CTCF.p2:-7:0.988
chr1	109942120	109942225	reg1014814.p2	8.299	+	TSC_hg19_v1_chr1_-_109940529 AB590289 DQ896793 AK293118 BC023542 NM_002959 X98248	-1604	-	AK310147 AK301548 NM_001205228	-6249	-	HQ258377 BC108664 BC132900 BC132902 BC144471 AK129834 NM_001010985	-92535	-	BT019717 CR456847 AB528717 X61970 BC102018 BC102019 BC102020 TSC_hg19_v1_chr1_-_109969040	26824	-	BC103751 TSC_hg19_v1_chr1_-_109969048	26877	-	AK225990 TSC_hg19_v1_chr1_-_109969071 AK304448 AK313351 NM_001199772 NM_002790 NM_001199773 NM_001199774	26910	-	DQ896793|SORT1|6272|sortilin 1##AK293118|SORT1|6272|sortilin 1##BC023542|SORT1|6272|sortilin 1##NM_002959|SORT1|6272|sortilin 1##AK310147|SORT1|6272|sortilin 1##AK301548|SORT1|6272|sortilin 1##NM_001205228|SORT1|6272|sortilin 1##HQ258377|MYBPHL|343263|myosin binding protein H-like##BC108664|MYBPHL|343263|myosin binding protein H-like##BC132900|MYBPHL|343263|myosin binding protein H-like##BC132902|MYBPHL|343263|myosin binding protein H-like##BC144471|MYBPHL|343263|myosin binding protein H-like##AK129834|MYBPHL|343263|myosin binding protein H-like##NM_001010985|MYBPHL|343263|myosin binding protein H-like##BT019717|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##CR456847|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##X61970|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##BC102018|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##BC102019|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##BC102020|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##BC103751|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##AK225990|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##AK304448|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##AK313351|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##NM_001199772|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##NM_002790|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##NM_001199773|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5##NM_001199774|PSMA5|5686|proteasome (prosome, macropain) subunit, alpha type, 5	0.982882	CTCF.p2:7:0.983
chr13	97610685	97610801	reg1017961.p1	8.299	+	AF539426 NM_153456	-867651	+	CU688350 TSC_hg19_v1_chr13_-_96705666 BC125233 BC125234 AF227906 BC017759 BC067807 BC111021 AK001735 BC032302 NM_020121	-905093	-	TSC_hg19_v1_chr13_+_96329409 BC047936 BC020215 BC033823 AB384852 CU690538	-1281285	+	AK122639 NM_080818 AK313684	35869	-	TSC_hg19_v1_chr13_+_97794087 CR749802	183339	+	TSC_hg19_v1_chr13_+_97874586 AK074610 NM_144778 NM_207304 AK291727 AF061261 AF491866 BC032426 BC104038 BC104039 BC104040 AK315844	263852	+	AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##BC125233|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC125234|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF227906|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC017759|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC067807|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC111021|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AK001735|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC032302|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##NM_020121|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC047936|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##BC033823|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##AK122639|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##NM_080818|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AK313684|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_144778|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_207304|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK291727|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF061261|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF491866|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC032426|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104038|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104039|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104040|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK315844|MBNL2|10150|muscleblind-like 2 (Drosophila)	0.99582	CTCF.p2:-10:0.996
chr15	99884159	99884294	reg1016811.p2	8.299	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-92584	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-92810	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-94520	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	221927	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	221968	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	222009	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.0	
chr2	105490015	105490123	reg1016548.p1	8.299	+	TSC_hg19_v1_chr2_+_105471877 NM_006236	-18171	+	TSC_hg19_v1_chr2_-_105467912 AK096498	-22153	-	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	-2111487	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	164445	+	BC066879 BC066880 BC067455 NM_007227 CU688176 EU883573	368188	+	TSC_hg19_v1_chr2_-_105946156 BC020548 BC010093 NM_001142621 NM_004257	456083	-	NM_006236|POU3F3|5455|POU class 3 homeobox 3##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9##BC066879|GPR45|11250|G protein-coupled receptor 45##BC066880|GPR45|11250|G protein-coupled receptor 45##BC067455|GPR45|11250|G protein-coupled receptor 45##NM_007227|GPR45|11250|G protein-coupled receptor 45##EU883573|GPR45|11250|G protein-coupled receptor 45##BC020548|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_001142621|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_004257|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1	0.062613	
chr9	78481314	78481429	reg1016283.p1	8.299	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	-777861	+	TSC_hg19_v1_chr9_+_77703406 NM_012383	-777971	+	BC001366 TSC_hg19_v1_chr9_-_77703070 AK000566 AK097144 AK023413 BC036804 NM_001127603 NM_017881 BC026243	-778283	-	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	24264	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	528020	-	AY196293 NM_001097634	575210	+	AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1##NM_012383|OSTF1|26578|osteoclast stimulating factor 1##BC001366|C9orf95|54981|chromosome 9 open reading frame 95##AK000566|C9orf95|54981|chromosome 9 open reading frame 95##AK097144|C9orf95|54981|chromosome 9 open reading frame 95##AK023413|C9orf95|54981|chromosome 9 open reading frame 95##BC036804|C9orf95|54981|chromosome 9 open reading frame 95##NM_001127603|C9orf95|54981|chromosome 9 open reading frame 95##NM_017881|C9orf95|54981|chromosome 9 open reading frame 95##BC026243|C9orf95|54981|chromosome 9 open reading frame 95##NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.880341	CTCF.p2:2:0.880
chr3	152743926	152744052	reg1016044.p1	8.298	+	NM_002563 Z49205	-191254	+	AY358260 NM_001123228	-685211	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-726796	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	136037	+	TSC_hg19_v1_chr3_+_152880058 BC012362	136059	+	AF086445 NM_001101337	458294	+	NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79	0.967182	CTCF.p2:0:0.967
chr5	39716709	39716859	reg1014875.p2	8.298	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-291467	-	TSC_hg19_v1_chr5_-_39425082 AK314381	-291720	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	-291833	-	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	963243	+	TSC_hg19_v1_chr5_+_40680042 L25124	963260	+	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	1039256	-	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33	0.060576	
chr7	130380813	130380924	reg1014427.p2	8.298	+	AF294347 AF431815 BC038415 NM_052933	-9513	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-27273	-	TSC_hg19_v1_chr7_-_130353564 AF207598 AF157833	-27299	-	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	38059	-	TSC_hg19_v1_chr7_-_130792857 BC047367	411991	-	AK294384 NM_001145354	413986	+	AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##AF207598|COPG2|26958|coatomer protein complex, subunit gamma 2##AF157833|COPG2|26958|coatomer protein complex, subunit gamma 2##AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.144185	
chr12	121932120	121932244	reg1015506.p1	8.297	+	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	-27108	-	AF306709 TSC_hg19_v1_chr12_+_121837931 NM_025126 NM_194271 AK025439 AK225285 AK304366 BC007826 BC039029 BC046174 BC029038	-94218	+	AK025614 NM_001137559	-140171	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	86077	-	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	86732	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	132461	+	BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##AF306709|RNF34|80196|ring finger protein 34##NM_025126|RNF34|80196|ring finger protein 34##NM_194271|RNF34|80196|ring finger protein 34##AK025439|RNF34|80196|ring finger protein 34##AK225285|RNF34|80196|ring finger protein 34##BC007826|RNF34|80196|ring finger protein 34##BC039029|RNF34|80196|ring finger protein 34##BC046174|RNF34|80196|ring finger protein 34##AK025614|ANAPC5|51433|anaphase promoting complex subunit 5##NM_001137559|ANAPC5|51433|anaphase promoting complex subunit 5##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1	0.980396	CTCF.p2:-11:0.980
chr5	36870670	36870818	reg1016742.p2	8.297	+	NM_001166695 U03504 AB529121 AY954110 TSC_hg19_v1_chr5_+_36608562	-262248	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	-264016	+	NM_001166696 NM_004172	-264288	+	TSC_hg19_v1_chr5_-_36876762 AK000901	6019	-	TSC_hg19_v1_chr5_+_36876875 NM_015384 NM_133433 AJ627032 AJ640137	6120	+	TSC_hg19_v1_chr5_+_36876945 BC146821 BX640644 BC131490 AK290347 BX538178 BX538177	6326	+	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK000901|LOC646719|646719|uncharacterized LOC646719##NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)##NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)##BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)##BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)##BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)##AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)	0.993402	CTCF.p2:-1:0.993
chr5	57758598	57758729	reg1015919.p2	8.297	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	-2727	-	BC137470 BC137473 BX648504 NM_001017992	-980069	-	NM_001127236 AL136844 AB463051 AM392551 AM393442	-1248735	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	28631	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	120256	+	BC036319 NM_001197223	537095	-	DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	1.039258	CTCF.p2:3:0.959
chr6_mcf_hap5	2546797	2546934	reg1018751.p1	8.297	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr10	13578875	13579006	reg1017181.p1	8.296	+	BC031618 AK097602 NM_001100912 NM_152751	-33981	-	TSC_hg19_v1_chr10_-_13390214 U34044 BC063816 GU954545 GU954546 GU954547 GU954548 GU954549 NM_001195602 NM_001195604 NM_012247	-188673	-	TSC_hg19_v1_chr10_-_13390036 AK301568 AK309829	-188901	-	NM_003675 TSC_hg19_v1_chr10_+_13628948	50003	+	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	50047	+	TSC_hg19_v1_chr10_-_13749648 AK057828	170749	-	BC031618|BEND7|222389|BEN domain containing 7##AK097602|BEND7|222389|BEN domain containing 7##NM_001100912|BEND7|222389|BEN domain containing 7##NM_152751|BEND7|222389|BEN domain containing 7##U34044|SEPHS1|22929|selenophosphate synthetase 1##BC063816|SEPHS1|22929|selenophosphate synthetase 1##GU954545|SEPHS1|22929|selenophosphate synthetase 1##GU954546|SEPHS1|22929|selenophosphate synthetase 1##GU954547|SEPHS1|22929|selenophosphate synthetase 1##GU954548|SEPHS1|22929|selenophosphate synthetase 1##GU954549|SEPHS1|22929|selenophosphate synthetase 1##NM_001195602|SEPHS1|22929|selenophosphate synthetase 1##NM_001195604|SEPHS1|22929|selenophosphate synthetase 1##NM_012247|SEPHS1|22929|selenophosphate synthetase 1##AK301568|SEPHS1|22929|selenophosphate synthetase 1##AK309829|SEPHS1|22929|selenophosphate synthetase 1##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK057828|FRMD4A|55691|FERM domain containing 4A	0.877219	CTCF.p2:6:0.877
chr1	100173237	100173344	reg1016217.p1	8.296	+	NM_017734 AF262379 AL390971 AJ312214 BC012570 AK000278 AL390973	-61723	+	TSC_hg19_v1_chr1_+_99730067 AF357013 AK300361	-443205	+	AF541281 NM_001166252 NM_014839 AB007924 AK056665 AY304518 AB384482 BC042963 TSC_hg19_v1_chr1_+_99730047 AK291369 AK297417	-443340	+	AK131302 NM_001013660	58058	-	TSC_hg19_v1_chr1_+_100315653 NM_000642 U84007	142353	+	TSC_hg19_v1_chr1_+_100315681 AB621804	142408	+	NM_017734|PALMD|54873|palmdelphin##AF262379|PALMD|54873|palmdelphin##AL390971|PALMD|54873|palmdelphin##AJ312214|PALMD|54873|palmdelphin##BC012570|PALMD|54873|palmdelphin##AK000278|PALMD|54873|palmdelphin##AL390973|PALMD|54873|palmdelphin##AF357013|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK300361|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK131302|FRRS1|391059|ferric-chelate reductase 1##NM_001013660|FRRS1|391059|ferric-chelate reductase 1##NM_000642|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##U84007|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	0.953567	CTCF.p2:9:0.954
chr1	112257603	112257727	reg1016470.p2	8.296	+	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	-95198	+	BC041707 BC064411 NM_001081976	-151086	-	NM_000677 NM_020683	-210923	-	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	24290	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	40554	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	40770	-	NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B	0.823949	CTCF.p2:16:0.824
chr2	135450170	135450301	reg1015410.p1	8.296	+	NM_002410 D17716 AF113921	-438350	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-1124197	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-1270881	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	26321	-	AK125008 NM_138326 BC016018 BC107420 AB071418	145983	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	226162	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.0	
chr3	101943168	101943303	reg1017543.p1	8.296	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-374861	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-396275	+	AK289689 NM_001134456	-444950	+	AY090780 NM_175056 BC143817	210632	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	3142345	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	3142587	+	AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule	0.094469	
chr11	71131599	71131730	reg1016260.p2	8.295	+	TSC_hg19_v1_chr11_-_70963627 AK096045	-168039	-	AB208025 NM_012309	-195857	-	TSC_hg19_v1_chr11_-_70858244 DQ152234	-273358	-	TSC_hg19_v1_chr11_-_71159417 AF034544 BC000054 AK312775 AK289497	27741	-	TSC_hg19_v1_chr11_-_71159471 AK303881 NM_001163817 NM_001360	27798	-	NM_018161 TSC_hg19_v1_chr11_+_71164256 AK022436 BC003638 BC003666	32572	+	AK096045|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AB208025|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##NM_012309|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##DQ152234|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AF034544|DHCR7|1717|7-dehydrocholesterol reductase##BC000054|DHCR7|1717|7-dehydrocholesterol reductase##AK312775|DHCR7|1717|7-dehydrocholesterol reductase##AK289497|DHCR7|1717|7-dehydrocholesterol reductase##AK303881|DHCR7|1717|7-dehydrocholesterol reductase##NM_001163817|DHCR7|1717|7-dehydrocholesterol reductase##NM_001360|DHCR7|1717|7-dehydrocholesterol reductase##NM_018161|NADSYN1|55191|NAD synthetase 1##AK022436|NADSYN1|55191|NAD synthetase 1##BC003638|NADSYN1|55191|NAD synthetase 1##BC003666|NADSYN1|55191|NAD synthetase 1	0.977304	CTCF.p2:2:0.977
chr22	22292988	22293147	reg1011407.p2	8.295	+	TSC_hg19_v1_chr22_-_22221955 BC017832 NM_002745 NM_138957	-71097	-	AK295188 TSC_hg19_v1_chr22_-_22221938	-71130	-	TSC_hg19_v1_chr22_-_22221936 DQ399292 AB384931 EU176323 EU831429 EU831522 AK307615 Z11694 AK090869 BC099905	-71238	-	TSC_hg19_v1_chr22_-_22307191 BC071989 BC013798 D13640 BC105599	14132	-	TSC_hg19_v1_chr22_-_22307213 AK291628 NM_014634	14164	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	44080	-	BC017832|MAPK1|5594|mitogen-activated protein kinase 1##NM_002745|MAPK1|5594|mitogen-activated protein kinase 1##NM_138957|MAPK1|5594|mitogen-activated protein kinase 1##AK295188|MAPK1|5594|mitogen-activated protein kinase 1##DQ399292|MAPK1|5594|mitogen-activated protein kinase 1##EU176323|MAPK1|5594|mitogen-activated protein kinase 1##EU831429|MAPK1|5594|mitogen-activated protein kinase 1##EU831522|MAPK1|5594|mitogen-activated protein kinase 1##AK307615|MAPK1|5594|mitogen-activated protein kinase 1##Z11694|MAPK1|5594|mitogen-activated protein kinase 1##AK090869|MAPK1|5594|mitogen-activated protein kinase 1##BC099905|MAPK1|5594|mitogen-activated protein kinase 1##BC071989|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##D13640|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##BC105599|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##AK291628|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##NM_014634|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta	0.985645	CTCF.p2:26:0.986
chr22	40328927	40329044	reg1014671.p1	8.295	+	AK303280 AK303657 AK312830 TSC_hg19_v1_chr22_+_40322634 AK303470	-6361	+	TSC_hg19_v1_chr22_+_40297183 AF129476 AF090456 CR456498 Y18051	-31738	+	AY069959 NM_004810 TSC_hg19_v1_chr22_+_40297087 AK303332 AK303512 AF236119 AJ011736 BC025692 AF042380 AF102694	-31861	+	TSC_hg19_v1_chr22_+_40390935 BC031099 NM_138435	61959	+	TSC_hg19_v1_chr22_+_40440774 NM_001024843	111924	+	TSC_hg19_v1_chr22_+_40441403 BC028626	112447	+	AK303280|GRAP2|9402|GRB2-related adaptor protein 2##AK303657|GRAP2|9402|GRB2-related adaptor protein 2##AK312830|GRAP2|9402|GRB2-related adaptor protein 2##AK303470|GRAP2|9402|GRB2-related adaptor protein 2##AF129476|GRAP2|9402|GRB2-related adaptor protein 2##AF090456|GRAP2|9402|GRB2-related adaptor protein 2##CR456498|GRAP2|9402|GRB2-related adaptor protein 2##Y18051|GRAP2|9402|GRB2-related adaptor protein 2##AY069959|GRAP2|9402|GRB2-related adaptor protein 2##NM_004810|GRAP2|9402|GRB2-related adaptor protein 2##AK303332|GRAP2|9402|GRB2-related adaptor protein 2##AK303512|GRAP2|9402|GRB2-related adaptor protein 2##AF236119|GRAP2|9402|GRB2-related adaptor protein 2##AJ011736|GRAP2|9402|GRB2-related adaptor protein 2##BC025692|GRAP2|9402|GRB2-related adaptor protein 2##AF042380|GRAP2|9402|GRB2-related adaptor protein 2##AF102694|GRAP2|9402|GRB2-related adaptor protein 2##BC031099|FAM83F|113828|family with sequence similarity 83, member F##NM_138435|FAM83F|113828|family with sequence similarity 83, member F##NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B##BC028626|TNRC6B|23112|trinucleotide repeat containing 6B	0.019072	
chr7	2758684	2758801	reg1016632.p1	8.295	+	AK289723 AB075830 BC146753 NM_133463	-39584	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-87039	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	-87139	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	125066	-	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	324720	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	582257	+	AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1	0.763209	CTCF.p2:3:0.763
chr12	57566911	57567023	reg1015906.p2	8.294	+	TSC_hg19_v1_chr12_+_57522452 BC045107	-44504	+	TSC_hg19_v1_chr12_+_57522265 BC052593 BC072015 NM_002332 X13916	-44685	+	TSC_hg19_v1_chr12_-_57505177 NM_001178078 NM_001178080 NM_001178081 NM_003153	-61770	-	AY358614 NM_007224 TSC_hg19_v1_chr12_+_57610601 BC036679 AK094231 AK290949 BC053581 CU690992	43697	+	NM_001166356 NM_005412 TSC_hg19_v1_chr12_+_57623504 AK055053 AK223555 AK298231 AK301339 AK303827 BC032584 BC044211 AK295941 BC008066 BC012833 BC011911 BC091501 CU680112 CU689432 AB527799 BT006866 DQ891309 DQ894430	56491	+	NM_001166358 BX647711 AK301443 TSC_hg19_v1_chr12_+_57623972 BX648847 NM_001166359 NM_001166357 BC004189 BC004215 BC008711 AK296183 AK297173 AK315916	57021	+	BC045107|LRP1|4035|low density lipoprotein receptor-related protein 1##BC052593|LRP1|4035|low density lipoprotein receptor-related protein 1##BC072015|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_002332|LRP1|4035|low density lipoprotein receptor-related protein 1##X13916|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_001178078|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178080|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178081|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_003153|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AY358614|NXPH4|11247|neurexophilin 4##NM_007224|NXPH4|11247|neurexophilin 4##BC036679|NXPH4|11247|neurexophilin 4##AK094231|NXPH4|11247|neurexophilin 4##AK290949|NXPH4|11247|neurexophilin 4##BC053581|NXPH4|11247|neurexophilin 4##NM_001166356|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_005412|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK055053|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK223555|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK298231|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301339|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK303827|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC032584|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC044211|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK295941|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008066|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC011911|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC091501|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BT006866|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ891309|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ894430|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166358|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX647711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301443|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX648847|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166359|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166357|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK296183|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK297173|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK315916|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)	0.508077	CTCF.p2:-3:0.508
chr14	83766958	83767067	reg1016017.p2	8.294	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-1766785	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-1766864	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-1902186	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	2229461	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	2229529	+	TSC_hg19_v1_chr14_+_85999692 AK297248	2232573	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.38914	CTCF.p2:-10:0.389
chr15	99424970	99425097	reg1016277.p1	8.294	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-232277	+	TSC_hg19_v1_chr15_+_99191767 AB425196	-233062	+	AK097062 AK097062 NM_182562	-367423	-	BC104743 BC104744 BC105686 NM_001102612	123804	-	AK058162 NM_001167902	125990	-	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	220207	+	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein	0.993783	CTCF.p2:3:0.994
chr7	39991205	39991341	reg1015953.p1	8.294	+	AJ297709 AJ297710 TSC_hg19_v1_chr7_+_39990171	-1132	+	TSC_hg19_v1_chr7_+_39989958 AK092534 NM_003718 NM_031267	-1314	+	BC064414 TSC_hg19_v1_chr7_+_39989879	-1389	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	182858	-	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	183258	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	183336	+	AJ297709|CDK13|8621|cyclin-dependent kinase 13##AJ297710|CDK13|8621|cyclin-dependent kinase 13##AK092534|CDK13|8621|cyclin-dependent kinase 13##NM_003718|CDK13|8621|cyclin-dependent kinase 13##NM_031267|CDK13|8621|cyclin-dependent kinase 13##BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10	0.325996	CTCF.p2:3:0.300
chr1	236109929	236110047	reg1015782.p2	8.293	+	NM_000081 U67615 TSC_hg19_v1_chr1_-_236030233	-79744	-	TSC_hg19_v1_chr1_-_236030193 BC020793	-79805	-	BC022485 NM_001098721 NM_004485	-295935	-	TSC_hg19_v1_chr1_-_236228375 AB209448 CU692272	118389	-	TSC_hg19_v1_chr1_-_236228393 BC045606 M30269	118437	-	TSC_hg19_v1_chr1_-_236228477 NM_002508	118490	-	NM_000081|LYST|1130|lysosomal trafficking regulator##U67615|LYST|1130|lysosomal trafficking regulator##BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##AB209448|NID1|4811|nidogen 1##BC045606|NID1|4811|nidogen 1##M30269|NID1|4811|nidogen 1##NM_002508|NID1|4811|nidogen 1	0.0	
chr22	30652182	30652302	reg1005288.p2	8.293	+	AB527710 X13967 BC093733 BC093735 BC143305 BC069540 TSC_hg19_v1_chr22_-_30642749 AK315310 NM_002309	-9503	-	BC030013 NM_152510	-175790	+	BC142713 TSC_hg19_v1_chr22_+_30279201 AB002369 BC152455	-372981	+	CR541703 AB463155 CU013134 CU013422 DQ892537 DQ895748 CR456534 BC011589 NM_020530 TSC_hg19_v1_chr22_-_30662841	10573	-	CU013000 CU013288 CU692418 AB528172 BC021927 AK309436 AK055587 TSC_hg19_v1_chr22_-_30685566 CR456449 AK310246 NM_001037666	33308	-	TSC_hg19_v1_chr22_-_30722928 AB449894 AB590468 BC143051 BC143052 BC150187 CT841514 BC150214 AK127939 AF331038 BC022201 BC136815 BC171775 AK074656 BC142940 NM_001204240 NM_031937	70685	-	X13967|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093733|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093735|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC143305|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC069540|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AK315310|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##NM_002309|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC030013|HORMAD2|150280|HORMA domain containing 2##NM_152510|HORMAD2|150280|HORMA domain containing 2##BC142713|MTMR3|8897|myotubularin related protein 3##AB002369|MTMR3|8897|myotubularin related protein 3##BC152455|MTMR3|8897|myotubularin related protein 3##CR541703|OSM|5008|oncostatin M##CU013134|OSM|5008|oncostatin M##CU013422|OSM|5008|oncostatin M##DQ892537|OSM|5008|oncostatin M##DQ895748|OSM|5008|oncostatin M##CR456534|OSM|5008|oncostatin M##BC011589|OSM|5008|oncostatin M##NM_020530|OSM|5008|oncostatin M##CU013000|GATSL3|652968|GATS protein-like 3##CU013288|GATSL3|652968|GATS protein-like 3##BC021927|GATSL3|652968|GATS protein-like 3##AK309436|GATSL3|652968|GATS protein-like 3##AK055587|GATSL3|652968|GATS protein-like 3##CR456449|GATSL3|652968|GATS protein-like 3##AK310246|GATSL3|652968|GATS protein-like 3##NM_001037666|GATSL3|652968|GATS protein-like 3##AB449894|TBC1D10A|83874|TBC1 domain family, member 10A##BC143051|TBC1D10A|83874|TBC1 domain family, member 10A##BC143052|TBC1D10A|83874|TBC1 domain family, member 10A##BC150187|TBC1D10A|83874|TBC1 domain family, member 10A##CT841514|TBC1D10A|83874|TBC1 domain family, member 10A##BC150214|TBC1D10A|83874|TBC1 domain family, member 10A##AK127939|TBC1D10A|83874|TBC1 domain family, member 10A##AF331038|TBC1D10A|83874|TBC1 domain family, member 10A##BC022201|TBC1D10A|83874|TBC1 domain family, member 10A##BC136815|TBC1D10A|83874|TBC1 domain family, member 10A##BC171775|TBC1D10A|83874|TBC1 domain family, member 10A##AK074656|TBC1D10A|83874|TBC1 domain family, member 10A##BC142940|TBC1D10A|83874|TBC1 domain family, member 10A##NM_001204240|TBC1D10A|83874|TBC1 domain family, member 10A##NM_031937|TBC1D10A|83874|TBC1 domain family, member 10A	0.995125	CTCF.p2:-1:0.995
chr3	181976466	181976583	reg1016169.p1	8.292	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-546386	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-546811	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-559132	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	534763	+	AK296750 TSC_hg19_v1_chr3_+_182511291	534771	+	TSC_hg19_v1_chr3_+_182511375 AF156548	534865	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.91258	CTCF.p2:30:0.913
chr7	157179968	157180128	reg1017098.p1	8.292	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	-50337	+	TSC_hg19_v1_chr7_+_157023934 AK098447	-156042	+	D13635 TSC_hg19_v1_chr7_+_156931668 BC014029	-248365	+	TSC_hg19_v1_chr7_+_157647233 BC034557	467226	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	1200405	-	BC028618 TSC_hg19_v1_chr7_-_158497496 AK092008 AX747307 BC043404 BX537845 NM_017760	1317429	-	AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##D13635|UBE3C|9690|ubiquitin protein ligase E3C##BC014029|UBE3C|9690|ubiquitin protein ligase E3C##BC034557|LOC100506585|100506585|uncharacterized LOC100506585##DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC028618|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK092008|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BC043404|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BX537845|NCAPG2|54892|non-SMC condensin II complex, subunit G2##NM_017760|NCAPG2|54892|non-SMC condensin II complex, subunit G2	0.979902	CTCF.p2:29:0.980
chr16	84540144	84540253	reg1015976.p2	8.291	+	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	-1907	-	TSC_hg19_v1_chr16_+_84402143 AK300526 AY791884 BX648333 NM_014861 AK316128 CR749829	-138056	+	AF302109 NM_021197 AF169631 TSC_hg19_v1_chr16_+_84328440 AK075061 BC029159 DQ893365 DQ896682	-211710	+	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	111378	-	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	111462	-	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	141936	+	BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##AK300526|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AY791884|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BX648333|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##NM_014861|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AK316128|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##CR749829|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AF302109|WFDC1|58189|WAP four-disulfide core domain 1##NM_021197|WFDC1|58189|WAP four-disulfide core domain 1##AF169631|WFDC1|58189|WAP four-disulfide core domain 1##AK075061|WFDC1|58189|WAP four-disulfide core domain 1##BC029159|WFDC1|58189|WAP four-disulfide core domain 1##DQ893365|WFDC1|58189|WAP four-disulfide core domain 1##DQ896682|WFDC1|58189|WAP four-disulfide core domain 1##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)	0.998848	CTCF.p2:9:0.999
chrX	1442280	1442427	reg1019352.p1	8.291	+	NM_001161530 NM_172247 M73832 DQ893104 DQ896376 AB590144 CU687176 DQ841258 X54935	-40770	+	NM_001161529 NM_001161531 NM_001161532 NM_006140 NM_172245 NM_172246 NM_172249 AK293086 AK301395 BC071835 M64445 BC002635 AL833597 AK309630 L29348 L29349 U93096 X17648	-54639	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	-110769	-	BC035407 NM_002183	13155	+	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	68616	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	129448	-	NM_001161530|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172247|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M73832|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ893104|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ896376|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ841258|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X54935|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161529|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161531|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161532|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_006140|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172245|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172246|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172249|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK293086|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK301395|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC071835|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M64445|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC002635|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AL833597|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK309630|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29348|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29349|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##U93096|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X17648|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2##BC035407|IL3RA|3563|interleukin 3 receptor, alpha (low affinity)##NM_002183|IL3RA|3563|interleukin 3 receptor, alpha (low affinity)##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like	1.058078	CTCF.p2:-6:0.992
chr1	17446695	17446834	reg1015544.p3	8.290	+	AB587350 AB023211 AB030176 BC009701 TSC_hg19_v1_chr1_-_17445947 AK295783 NM_007365	-857	-	DQ403007 TSC_hg19_v1_chr1_-_17380528 AK312056 U17248 BC007840 NM_003000	-66189	-	AL354615 AY461712 TSC_hg19_v1_chr1_-_17338424 BC030267 AK290210 NM_001141973 NM_001141974 NM_022089	-108381	-	AK314644 AK026652 AK225541 NM_013358 AB033768 BC130574 BC136402 HQ258487	84901	+	AB026831 NM_016233 BC109091 BC041592 BC109092	128835	+	AF229067 AK314839 NM_012387 AB017919 AK290507 AK309637 BC025718 AB527709 CU693030	187939	+	AB023211|PADI2|11240|peptidyl arginine deiminase, type II##AB030176|PADI2|11240|peptidyl arginine deiminase, type II##BC009701|PADI2|11240|peptidyl arginine deiminase, type II##AK295783|PADI2|11240|peptidyl arginine deiminase, type II##NM_007365|PADI2|11240|peptidyl arginine deiminase, type II##DQ403007|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AK312056|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##U17248|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##BC007840|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##NM_003000|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AL354615|ATP13A2|23400|ATPase type 13A2##AY461712|ATP13A2|23400|ATPase type 13A2##BC030267|ATP13A2|23400|ATPase type 13A2##AK290210|ATP13A2|23400|ATPase type 13A2##NM_001141973|ATP13A2|23400|ATPase type 13A2##NM_001141974|ATP13A2|23400|ATPase type 13A2##NM_022089|ATP13A2|23400|ATPase type 13A2##AK314644|PADI1|29943|peptidyl arginine deiminase, type I##AK026652|PADI1|29943|peptidyl arginine deiminase, type I##AK225541|PADI1|29943|peptidyl arginine deiminase, type I##NM_013358|PADI1|29943|peptidyl arginine deiminase, type I##AB033768|PADI1|29943|peptidyl arginine deiminase, type I##BC130574|PADI1|29943|peptidyl arginine deiminase, type I##BC136402|PADI1|29943|peptidyl arginine deiminase, type I##HQ258487|PADI1|29943|peptidyl arginine deiminase, type I##AB026831|PADI3|51702|peptidyl arginine deiminase, type III##NM_016233|PADI3|51702|peptidyl arginine deiminase, type III##BC109091|PADI3|51702|peptidyl arginine deiminase, type III##BC041592|PADI3|51702|peptidyl arginine deiminase, type III##BC109092|PADI3|51702|peptidyl arginine deiminase, type III##AF229067|PADI4|23569|peptidyl arginine deiminase, type IV##AK314839|PADI4|23569|peptidyl arginine deiminase, type IV##NM_012387|PADI4|23569|peptidyl arginine deiminase, type IV##AB017919|PADI4|23569|peptidyl arginine deiminase, type IV##AK290507|PADI4|23569|peptidyl arginine deiminase, type IV##AK309637|PADI4|23569|peptidyl arginine deiminase, type IV##BC025718|PADI4|23569|peptidyl arginine deiminase, type IV	1.439735	CTCF.p2:-6:0.861	CTCF.p2:-103:0.579
chr19	3126123	3126216	reg1013470.p1	8.290	+	TSC_hg19_v1_chr19_+_3122573 BC051315 CU674752	-3564	+	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	-3776	+	TSC_hg19_v1_chr19_+_3094528 BC096225 BC096226 BC096227 AB463701 AF011497 AF493900 CR457004 AB209435	-31578	+	TSC_hg19_v1_chr19_+_3136030 GU727645 NM_002068 M63904 AK300481 AK291329 BC013585 GU727637	9975	+	NM_003775 TSC_hg19_v1_chr19_+_3178766 BC014970 AJ000479	52583	+	TSC_hg19_v1_chr19_+_3185896 NM_020170	59709	+	BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096225|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096226|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096227|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF011497|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF493900|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##CR457004|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AB209435|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##GU727645|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_002068|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##M63904|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK300481|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK291329|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC013585|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##GU727637|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_003775|S1PR4|8698|sphingosine-1-phosphate receptor 4##BC014970|S1PR4|8698|sphingosine-1-phosphate receptor 4##AJ000479|S1PR4|8698|sphingosine-1-phosphate receptor 4##NM_020170|NCLN|56926|nicalin	0.578545	CTCF.p2:-7:0.579
chr5	145912945	145913089	reg1019392.p1	8.290	+	AB463658 AY351676 NM_194251 AK122627	-17304	-	TSC_hg19_v1_chr5_+_145826895 NM_001040006 NM_006706 AK304319 BC006109 BC014151 BC062351 AK126455 BC111727 AB209910 AB464301 AF017789	-86123	+	BC104923 BC112207 NM_002700 AB464668 EU446649 HQ258176	-194387	+	CU689232 DQ891785 DQ894969 TSC_hg19_v1_chr5_-_146257712	344657	-	AK314810 M64930 NM_004576 AK056192 NM_181675 AK289717 BX647887 NM_001127381	345282	-	BC031790 NM_181674 NM_181676	522627	-	AY351676|GPR151|134391|G protein-coupled receptor 151##NM_194251|GPR151|134391|G protein-coupled receptor 151##NM_001040006|TCERG1|10915|transcription elongation regulator 1##NM_006706|TCERG1|10915|transcription elongation regulator 1##AK304319|TCERG1|10915|transcription elongation regulator 1##BC006109|TCERG1|10915|transcription elongation regulator 1##BC014151|TCERG1|10915|transcription elongation regulator 1##BC062351|TCERG1|10915|transcription elongation regulator 1##AK126455|TCERG1|10915|transcription elongation regulator 1##BC111727|TCERG1|10915|transcription elongation regulator 1##AB209910|TCERG1|10915|transcription elongation regulator 1##AF017789|TCERG1|10915|transcription elongation regulator 1##BC104923|POU4F3|5459|POU class 4 homeobox 3##BC112207|POU4F3|5459|POU class 4 homeobox 3##NM_002700|POU4F3|5459|POU class 4 homeobox 3##EU446649|POU4F3|5459|POU class 4 homeobox 3##HQ258176|POU4F3|5459|POU class 4 homeobox 3##DQ891785|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##DQ894969|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK314810|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##M64930|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_004576|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK056192|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181675|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK289717|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BX647887|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_001127381|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	0.997078	CTCF.p2:-16:0.997
chr4	31372610	31372726	reg1012393.p2	8.289	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-650209	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-650474	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-650669	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	4873369	-	AK131492 NM_001136536 AK304357 AK316523	4910578	+	BC157885 NM_001170700	4912975	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.987066	CTCF.p2:10:0.987
chr5	118806673	118806813	reg1015549.p2	8.289	+	TSC_hg19_v1_chr5_+_118788215 NM_000414 NM_001199292 AK301212 AK312449 NM_001199291 BC003098 AK293254 AB208932 X87176 AK299685 AK298075 CU678374 DQ891866 DQ895055	-18547	+	TSC_hg19_v1_chr5_+_118691713 AF099935 AK001850 AF099936 CU675493	-115005	+	BC007014 NM_014350 BC005352 TSC_hg19_v1_chr5_+_118691687	-115125	+	AF427126 AY692447 NM_001163991 NM_182761 BC040622 BC128242 BC128243	158573	+	BC011941 TSC_hg19_v1_chr5_-_119740564	933807	-	TSC_hg19_v1_chr5_+_119799994 BC092474	993205	+	NM_000414|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199292|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK301212|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK312449|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199291|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC003098|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK293254|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##X87176|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK299685|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK298075|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ891866|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ895055|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AF099935|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001850|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099936|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC007014|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_014350|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC005352|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF427126|FAM170A|340069|family with sequence similarity 170, member A##AY692447|FAM170A|340069|family with sequence similarity 170, member A##NM_001163991|FAM170A|340069|family with sequence similarity 170, member A##NM_182761|FAM170A|340069|family with sequence similarity 170, member A##BC040622|FAM170A|340069|family with sequence similarity 170, member A##BC128242|FAM170A|340069|family with sequence similarity 170, member A##BC128243|FAM170A|340069|family with sequence similarity 170, member A##BC092474|PRR16|51334|proline rich 16	0.697806	CTCF.p2:-10:0.698
chr4	152198043	152198173	reg1019138.p1	8.288	+	TSC_hg19_v1_chr4_-_152149045 AK294476 NM_001243349	-48997	-	BC032404 BX647422 NM_001009555 NM_001128923	-50519	-	X75686 BC108890 BC108891 BC108892 BC108893 NM_001128924	-101429	-	BC121109 BC121110 NM_183375	216	+	TSC_hg19_v1_chr4_+_152330327 NM_001109977	132253	+	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	484033	-	AK294476|SH3D19|152503|SH3 domain containing 19##NM_001243349|SH3D19|152503|SH3 domain containing 19##BC032404|SH3D19|152503|SH3 domain containing 19##BX647422|SH3D19|152503|SH3 domain containing 19##NM_001009555|SH3D19|152503|SH3 domain containing 19##NM_001128923|SH3D19|152503|SH3 domain containing 19##BC108890|SH3D19|152503|SH3 domain containing 19##BC108891|SH3D19|152503|SH3 domain containing 19##BC108892|SH3D19|152503|SH3 domain containing 19##BC108893|SH3D19|152503|SH3 domain containing 19##NM_001128924|SH3D19|152503|SH3 domain containing 19##BC121109|PRSS48|345062|protease, serine, 48##BC121110|PRSS48|345062|protease, serine, 48##NM_183375|PRSS48|345062|protease, serine, 48##NM_001109977|FAM160A1|729830|family with sequence similarity 160, member A1##AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)	1.01124	CTCF.p2:-3:0.992
chr7	121036364	121036533	reg1014354.p1	8.288	+	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	-34	-	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	-111	-	AF169963 NM_057168	-67359	+	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	476713	+	TSC_hg19_v1_chr7_+_121513214 U88967	476773	+	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	747841	-	AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase	0.950865	CTCF.p2:8:0.951
chr10	31372774	31372884	reg1015076.p1	8.286	+	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	-52008	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	-84377	-	AF139543 BC066294 NM_183058	-454194	-	TSC_hg19_v1_chr10_+_31607451 BX647794	234607	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	235128	-	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	235304	+	BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1	0.985604	CTCF.p2:-3:0.986
chr19	39842183	39842327	reg1018328.p1	8.286	+	TSC_hg19_v1_chr19_+_39833151 BC080641	-9097	+	TSC_hg19_v1_chr19_+_39833101 BC054518 NM_018028 EF601121	-9140	+	TSC_hg19_v1_chr19_+_39833098 AK001073	-9158	+	CU673992 DQ891839 DQ895026 TSC_hg19_v1_chr19_-_39881519	39272	-	AK098423 AJ401156 BC000017 NM_019088 TSC_hg19_v1_chr19_-_39881747 AK001985 BC013402 AK294625	39439	-	AK300563 TSC_hg19_v1_chr19_+_39882017 AY729650 NM_017592 AB528726	39728	+	BC080641|SAMD4B|55095|sterile alpha motif domain containing 4B##BC054518|SAMD4B|55095|sterile alpha motif domain containing 4B##NM_018028|SAMD4B|55095|sterile alpha motif domain containing 4B##EF601121|SAMD4B|55095|sterile alpha motif domain containing 4B##AK001073|SAMD4B|55095|sterile alpha motif domain containing 4B##DQ891839|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##DQ895026|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK098423|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AJ401156|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##BC000017|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##NM_019088|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK001985|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##BC013402|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK294625|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK300563|MED29|55588|mediator complex subunit 29##AY729650|MED29|55588|mediator complex subunit 29##NM_017592|MED29|55588|mediator complex subunit 29	0.775639	CTCF.p2:-5:0.776
chr6	167897913	167898028	reg1016925.p1	8.286	+	BC068592 U03399 BC063451 BC033909 BC034995 NM_004610	-100013	-	AK093039 AK225984 AX747876 NM_031949 BC030650 AK301755 BC047411 AK314450 AY026506 CU688966 CU690408	-159353	+	AK091987 AX747293 NM_001143947 NM_018974 AJ422141 AJ508812 BC098248 BC099718 BC105635	-193094	+	AB016901 BC027853 TSC_hg19_v1_chr6_-_168197551	299570	-	TSC_hg19_v1_chr6_+_168227559 NM_001040000 NM_001207008 U02478 AB209420	329696	+	AB016902 NM_001129895	479648	-	BC068592|TCP10|6953|t-complex 10 homolog (mouse)##U03399|TCP10|6953|t-complex 10 homolog (mouse)##BC063451|TCP10|6953|t-complex 10 homolog (mouse)##NM_004610|TCP10|6953|t-complex 10 homolog (mouse)##AK093039|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK225984|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##NM_031949|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC030650|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK301755|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC047411|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK314450|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AY026506|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK091987|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_001143947|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_018974|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ422141|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ508812|UNC93A|54346|unc-93 homolog A (C. elegans)##BC098248|UNC93A|54346|unc-93 homolog A (C. elegans)##BC099718|UNC93A|54346|unc-93 homolog A (C. elegans)##BC105635|UNC93A|54346|unc-93 homolog A (C. elegans)##AB016901|C6orf123|26238|chromosome 6 open reading frame 123##BC027853|C6orf123|26238|chromosome 6 open reading frame 123##NM_001040000|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##NM_001207008|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##U02478|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##AB209420|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##AB016902|HGC6.3|100128124|uncharacterized LOC100128124##NM_001129895|HGC6.3|100128124|uncharacterized LOC100128124	0.880448	CTCF.p2:-4:0.880
chr13	105426159	105426311	reg1016937.p1	8.285	+	NM_000452 U10417	-1707040	-	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-1927749	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-1927981	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	692069	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	692356	+	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	1761114	-	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2	0.839894	CTCF.p2:-24:0.840
chr1	42810063	42810157	reg1015382.p1	8.285	+	TSC_hg19_v1_chr1_-_42801552 AK027075 NM_001198850	-8556	-	BC063298 NM_014947 TSC_hg19_v1_chr1_-_42800903	-9208	-	TSC_hg19_v1_chr1_-_42800884 BC014182 NM_001198852	-9220	-	TSC_hg19_v1_chr1_+_42846464 NM_173642 BC039737	36373	+	DQ891622 DQ894813 EU831664 EU831745 TSC_hg19_v1_chr1_-_42921707 AL136858	111600	-	AK301839 BC024186 AK057384 NM_001146192 NM_032257	111820	-	AK027075|FOXJ3|22887|forkhead box J3##NM_001198850|FOXJ3|22887|forkhead box J3##BC063298|FOXJ3|22887|forkhead box J3##NM_014947|FOXJ3|22887|forkhead box J3##BC014182|FOXJ3|22887|forkhead box J3##NM_001198852|FOXJ3|22887|forkhead box J3##NM_173642|RIMKLA|284716|ribosomal modification protein rimK-like family member A##BC039737|RIMKLA|284716|ribosomal modification protein rimK-like family member A##DQ891622|ZMYND12|84217|zinc finger, MYND-type containing 12##DQ894813|ZMYND12|84217|zinc finger, MYND-type containing 12##EU831664|ZMYND12|84217|zinc finger, MYND-type containing 12##EU831745|ZMYND12|84217|zinc finger, MYND-type containing 12##AL136858|ZMYND12|84217|zinc finger, MYND-type containing 12##AK301839|ZMYND12|84217|zinc finger, MYND-type containing 12##BC024186|ZMYND12|84217|zinc finger, MYND-type containing 12##AK057384|ZMYND12|84217|zinc finger, MYND-type containing 12##NM_001146192|ZMYND12|84217|zinc finger, MYND-type containing 12##NM_032257|ZMYND12|84217|zinc finger, MYND-type containing 12	0.010179	
chr1	89121513	89121634	reg1013499.p1	8.285	+	TSC_hg19_v1_chr1_+_87797426 BC065818	-1324158	+	TSC_hg19_v1_chr1_+_87797312 AY321514	-1324248	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	-1326892	+	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	28522	+	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	235638	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	235700	-	BC065818|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB	0.975655	CTCF.p2:-4:0.976
chr1	90098487	90098654	reg1016289.p2	8.285	+	AF385436 NM_015350	-74299	+	TSC_hg19_v1_chr1_+_89990454 BC060782 BC030607	-108094	+	NM_001134476 TSC_hg19_v1_chr1_+_89990414	-108155	+	TSC_hg19_v1_chr1_+_90098630 BC036122	63	+	NM_032270 TSC_hg19_v1_chr1_+_90098643	75	+	TSC_hg19_v1_chr1_+_90098707 AK127881 AB081509 BC103929 BC113973	194	+	AF385436|LRRC8B|23507|leucine rich repeat containing 8 family, member B##NM_015350|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC060782|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC030607|LRRC8B|23507|leucine rich repeat containing 8 family, member B##NM_001134476|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C##AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C##AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C	0.0	
chr3	136110592	136110714	reg1015591.p1	8.285	+	S67325 TSC_hg19_v1_chr3_+_135969193 BC013768 AB209009 BC053661 AK295312 AK130359 AK225733 AK303079 AK225215 AL831978 CU680676	-141451	+	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	-141489	+	TSC_hg19_v1_chr3_-_135914658 AK091956 NM_018133	-195972	-	TSC_hg19_v1_chr3_-_136471221 BC040708 AB210023 AK309934 BC064699 CR749247 NM_005862	360562	-	BC050423 NM_001097599 NM_001097600 NM_025246 TSC_hg19_v1_chr3_+_136537897 BC022557 AK314079 BC000111 AL136661	427266	+	TSC_hg19_v1_chr3_+_136581071 NM_006153 BC006403	470387	+	S67325|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC013768|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AB209009|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC053661|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK295312|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK130359|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225733|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK303079|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225215|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AL831978|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK091956|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_018133|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##BC040708|STAG1|10274|stromal antigen 1##AB210023|STAG1|10274|stromal antigen 1##AK309934|STAG1|10274|stromal antigen 1##BC064699|STAG1|10274|stromal antigen 1##CR749247|STAG1|10274|stromal antigen 1##NM_005862|STAG1|10274|stromal antigen 1##BC050423|TMEM22|80723|transmembrane protein 22##NM_001097599|TMEM22|80723|transmembrane protein 22##NM_001097600|TMEM22|80723|transmembrane protein 22##NM_025246|TMEM22|80723|transmembrane protein 22##BC022557|TMEM22|80723|transmembrane protein 22##AK314079|TMEM22|80723|transmembrane protein 22##BC000111|TMEM22|80723|transmembrane protein 22##AL136661|TMEM22|80723|transmembrane protein 22##NM_006153|NCK1|4690|NCK adaptor protein 1##BC006403|NCK1|4690|NCK adaptor protein 1	0.833526	CTCF.p2:-5:0.834
chr14	102789502	102789619	reg1015081.p2	8.284	+	TSC_hg19_v1_chr14_+_102786095 BX248266 NM_018335	-3466	+	AK093342 AX748064 TSC_hg19_v1_chr14_+_102783841	-5783	+	TSC_hg19_v1_chr14_-_102771492 AK094747 BC053536 BC026069 AK302349 AK312778 AB022694 NM_014226	-18061	-	NM_001177611 AF228148 TSC_hg19_v1_chr14_-_102829228 AF228149 BC000600 AK056112 NM_001177612 NM_032630	39592	-	BC151230 AB002327 NM_001172631 NM_014844 TSC_hg19_v1_chr14_+_102829304	39752	+	TSC_hg19_v1_chr14_+_102829428 BC030791 AK296395 AK299690 BC142667 BC142715 AK127721	39865	+	BX248266|ZNF839|55778|zinc finger protein 839##NM_018335|ZNF839|55778|zinc finger protein 839##AK093342|ZNF839|55778|zinc finger protein 839##AK094747|MOK|5891|MOK protein kinase##BC053536|MOK|5891|MOK protein kinase##BC026069|MOK|5891|MOK protein kinase##AK302349|MOK|5891|MOK protein kinase##AK312778|MOK|5891|MOK protein kinase##AB022694|MOK|5891|MOK protein kinase##NM_014226|MOK|5891|MOK protein kinase##NM_001177611|CINP|51550|cyclin-dependent kinase 2 interacting protein##AF228148|CINP|51550|cyclin-dependent kinase 2 interacting protein##AF228149|CINP|51550|cyclin-dependent kinase 2 interacting protein##BC000600|CINP|51550|cyclin-dependent kinase 2 interacting protein##AK056112|CINP|51550|cyclin-dependent kinase 2 interacting protein##NM_001177612|CINP|51550|cyclin-dependent kinase 2 interacting protein##NM_032630|CINP|51550|cyclin-dependent kinase 2 interacting protein##BC151230|TECPR2|9895|tectonin beta-propeller repeat containing 2##AB002327|TECPR2|9895|tectonin beta-propeller repeat containing 2##NM_001172631|TECPR2|9895|tectonin beta-propeller repeat containing 2##NM_014844|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC030791|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK296395|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK299690|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142667|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142715|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK127721|TECPR2|9895|tectonin beta-propeller repeat containing 2	0.754541	CTCF.p2:25:0.740
chr3	28328195	28328336	reg1016584.p1	8.284	+	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	-45167	+	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	-564064	-	AB031038 BC131712 NM_005442 AB463608 BC037568	-564472	-	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	62117	-	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	62296	-	NM_001040432	103721	+	CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2	0.016473	
chr9	35955085	35955193	reg1016829.p1	8.284	+	AY358408 NM_001039792	-48951	+	AY726589 NM_001004487 BC136715 BC136716	-84751	-	TSC_hg19_v1_chr9_+_35829375 BC064951 NM_001042590 BC082765	-125661	+	HQ258184 BC104869 BC113651 NM_019897	2983	-	TSC_hg19_v1_chr9_+_36036901 AK292653 NM_021111 AK315073 BC050306 BC032240 BC060806 BC137093 CU687432	81808	+	TSC_hg19_v1_chr9_+_36136731 AK074488 BC017918 AK075091 AK298741 AK307243 CR749781 AY039756 NM_022343	181593	+	AY358408|HRCT1|646962|histidine rich carboxyl terminus 1##NM_001039792|HRCT1|646962|histidine rich carboxyl terminus 1##AY726589|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##NM_001004487|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136715|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136716|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC064951|TMEM8B|51754|transmembrane protein 8B##NM_001042590|TMEM8B|51754|transmembrane protein 8B##BC082765|TMEM8B|51754|transmembrane protein 8B##HQ258184|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC104869|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC113651|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##NM_019897|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK074488|GLIPR2|152007|GLI pathogenesis-related 2##BC017918|GLIPR2|152007|GLI pathogenesis-related 2##AK075091|GLIPR2|152007|GLI pathogenesis-related 2##AK298741|GLIPR2|152007|GLI pathogenesis-related 2##AK307243|GLIPR2|152007|GLI pathogenesis-related 2##CR749781|GLIPR2|152007|GLI pathogenesis-related 2##AY039756|GLIPR2|152007|GLI pathogenesis-related 2##NM_022343|GLIPR2|152007|GLI pathogenesis-related 2	0.991584	CTCF.p2:-13:0.992
chr12	88389486	88389621	reg1017651.p1	8.283	+	BC035851 NM_013244	-1156896	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	-2121427	+	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	-2159316	-	AL833338 BC062424 AK093140 AX747948 NM_152589	33607	-	TSC_hg19_v1_chr12_+_88429312 AK095477 NM_001009894 CR936776 AK311222 BC058014 BX640968 BX537868 BX648026 AK311153 BC035136 BC092422 AB590923 AM392924 AL137488	39833	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	146316	-	BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AL833338|C12orf50|160419|chromosome 12 open reading frame 50##BC062424|C12orf50|160419|chromosome 12 open reading frame 50##AK093140|C12orf50|160419|chromosome 12 open reading frame 50##NM_152589|C12orf50|160419|chromosome 12 open reading frame 50##AK095477|C12orf29|91298|chromosome 12 open reading frame 29##NM_001009894|C12orf29|91298|chromosome 12 open reading frame 29##CR936776|C12orf29|91298|chromosome 12 open reading frame 29##AK311222|C12orf29|91298|chromosome 12 open reading frame 29##BC058014|C12orf29|91298|chromosome 12 open reading frame 29##BX640968|C12orf29|91298|chromosome 12 open reading frame 29##BX537868|C12orf29|91298|chromosome 12 open reading frame 29##BX648026|C12orf29|91298|chromosome 12 open reading frame 29##AK311153|C12orf29|91298|chromosome 12 open reading frame 29##BC035136|C12orf29|91298|chromosome 12 open reading frame 29##BC092422|C12orf29|91298|chromosome 12 open reading frame 29##AM392924|C12orf29|91298|chromosome 12 open reading frame 29##AL137488|C12orf29|91298|chromosome 12 open reading frame 29##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa	0.0	
chr7	134012774	134012900	reg1016992.p1	8.283	+	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	-11050	-	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	-11214	-	BC104897 BC104899 AK057348 NM_144648	-200760	+	TSC_hg19_v1_chr7_-_134143853 AB209796 BT019859 CR450351 CR542203 CU675153 J04795 DQ890758 DQ892546 DQ893921 DQ895757 M34720 AF328729 J05474 J05017 BC010391 BC005387 X15414	130996	-	TSC_hg19_v1_chr7_-_134143878 AK313439 BC000260 NM_001628 AK311339	131127	-	AF524864 NM_020299 BC008837	199533	+	AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AB209796|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BT019859|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR450351|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR542203|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J04795|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ890758|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ892546|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ893921|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ895757|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##M34720|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF328729|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05474|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05017|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC010391|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC005387|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##X15414|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK313439|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC000260|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001628|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK311339|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)	0.986056	CTCF.p2:6:0.986
chr2	236674973	236675084	reg1015080.p1	8.282	+	TSC_hg19_v1_chr2_+_236403297 AB384114 AF413078	-271718	+	TSC_hg19_v1_chr2_+_236402950 BC140856	-272051	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	-272225	+	AK311262 TSC_hg19_v1_chr2_-_237076045	400986	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	401604	-	NM_212556 BX647589	497966	-	AF413078|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18	0.991855	CTCF.p2:9:0.992
chr3	169648099	169648229	reg1012647.p2	8.282	+	BX648991 BX648534 BX648989 BX537903 NM_182610	-18744	+	HQ258307 BC117401 BC143569 BC143582 AY358138 AK097338 NM_024727 AK026912	-60507	-	NM_001080460	-108455	+	TSC_hg19_v1_chr3_+_169684598 NM_003262 AK294504 BC003677 BC007040 BC012035 BX648539 D87127 U93239 EU832302 EU832386	36424	+	TSC_hg19_v1_chr3_+_169755748 NM_014373	107590	+	TSC_hg19_v1_chr3_+_169755782 BC000181	107626	+	BX648991|SAMD7|344658|sterile alpha motif domain containing 7##BX648534|SAMD7|344658|sterile alpha motif domain containing 7##BX648989|SAMD7|344658|sterile alpha motif domain containing 7##BX537903|SAMD7|344658|sterile alpha motif domain containing 7##NM_182610|SAMD7|344658|sterile alpha motif domain containing 7##HQ258307|LRRC31|79782|leucine rich repeat containing 31##BC117401|LRRC31|79782|leucine rich repeat containing 31##BC143569|LRRC31|79782|leucine rich repeat containing 31##BC143582|LRRC31|79782|leucine rich repeat containing 31##AY358138|LRRC31|79782|leucine rich repeat containing 31##AK097338|LRRC31|79782|leucine rich repeat containing 31##NM_024727|LRRC31|79782|leucine rich repeat containing 31##AK026912|LRRC31|79782|leucine rich repeat containing 31##NM_001080460|LRRIQ4|344657|leucine-rich repeats and IQ motif containing 4##NM_003262|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC003677|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC007040|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC012035|SEC62|7095|SEC62 homolog (S. cerevisiae)##BX648539|SEC62|7095|SEC62 homolog (S. cerevisiae)##D87127|SEC62|7095|SEC62 homolog (S. cerevisiae)##U93239|SEC62|7095|SEC62 homolog (S. cerevisiae)##EU832302|SEC62|7095|SEC62 homolog (S. cerevisiae)##EU832386|SEC62|7095|SEC62 homolog (S. cerevisiae)##NM_014373|GPR160|26996|G protein-coupled receptor 160##BC000181|GPR160|26996|G protein-coupled receptor 160	0.850854	CTCF.p2:-2:0.851
chr10	121619022	121619164	reg1018687.p1	8.281	+	TSC_hg19_v1_chr10_-_121602031 BC000935	-17030	-	NM_001243194 AK123633	-40317	+	TSC_hg19_v1_chr10_+_121485653 BC111493 BC052367 BC082755 AB385409	-133388	+	AK023143 TSC_hg19_v1_chr10_-_121632359 BC004183 BC007219 NM_024834	13247	-	NM_007190 TSC_hg19_v1_chr10_+_121652241 AB019435 AK021846 AK314592 AK001135 AK001135 AK301517 BC063800 BC063800 BC002540 AF116723 BX649119 BX649119 AB384691 CU687818 BT006755	33096	+	NM_001030059 TSC_hg19_v1_chr10_+_122216486 BC101267 BC101268 BC101269 BC122535 BC132787 AK296273 HQ258170 AK310178	597546	+	BC000935|MCMBP|79892|minichromosome maintenance complex binding protein##NM_001243194|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK123633|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC111493|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC052367|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC082755|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK023143|MCMBP|79892|minichromosome maintenance complex binding protein##BC004183|MCMBP|79892|minichromosome maintenance complex binding protein##BC007219|MCMBP|79892|minichromosome maintenance complex binding protein##NM_024834|MCMBP|79892|minichromosome maintenance complex binding protein##NM_007190|SEC23IP|11196|SEC23 interacting protein##AB019435|SEC23IP|11196|SEC23 interacting protein##AK021846|SEC23IP|11196|SEC23 interacting protein##AK314592|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK301517|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC002540|SEC23IP|11196|SEC23 interacting protein##AF116723|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BT006755|SEC23IP|11196|SEC23 interacting protein##NM_001030059|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101267|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101268|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101269|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC122535|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC132787|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##HQ258170|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AK310178|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A	0.993021	CTCF.p2:20:0.993
chr2	10549354	10549481	reg1015179.p1	8.281	+	AK000596 NM_134421	-105592	+	TSC_hg19_v1_chr2_+_10443043 BC017482 NM_002149 BC009846 BC017028	-106368	+	BC093999 BC094001 NM_182626	-267438	+	D28365 BC014562 BC025296 X55362 TSC_hg19_v1_chr2_-_10588440	38943	-	TSC_hg19_v1_chr2_-_10588453 AK301956 NM_002539	39035	-	CU675005 TSC_hg19_v1_chr2_-_10830078 AK290680 AK024000 BC005125 AK024137 AK297169 AK299617	280627	-	AK000596|HPCAL1|3241|hippocalcin-like 1##NM_134421|HPCAL1|3241|hippocalcin-like 1##BC017482|HPCAL1|3241|hippocalcin-like 1##NM_002149|HPCAL1|3241|hippocalcin-like 1##BC009846|HPCAL1|3241|hippocalcin-like 1##BC017028|HPCAL1|3241|hippocalcin-like 1##BC093999|C2orf48|348738|chromosome 2 open reading frame 48##BC094001|C2orf48|348738|chromosome 2 open reading frame 48##NM_182626|C2orf48|348738|chromosome 2 open reading frame 48##D28365|ODC1|4953|ornithine decarboxylase 1##BC014562|ODC1|4953|ornithine decarboxylase 1##BC025296|ODC1|4953|ornithine decarboxylase 1##X55362|ODC1|4953|ornithine decarboxylase 1##AK301956|ODC1|4953|ornithine decarboxylase 1##NM_002539|ODC1|4953|ornithine decarboxylase 1##AK290680|NOL10|79954|nucleolar protein 10##AK024000|NOL10|79954|nucleolar protein 10##BC005125|NOL10|79954|nucleolar protein 10##AK024137|NOL10|79954|nucleolar protein 10##AK297169|NOL10|79954|nucleolar protein 10##AK299617|NOL10|79954|nucleolar protein 10	0.262675	CTCF.p2:12:0.263
chr2	88027596	88027739	reg1018574.p1	8.281	+	TSC_hg19_v1_chr2_+_87755060 AK312010	-272607	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	-272650	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	-724335	-	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	19952	+	AK302429 NM_001078170	97618	-	CR749330 NM_001024457	257641	-	AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1##AK302429|RGPD2|729857|RANBP2-like and GRIP domain containing 2##NM_001078170|RGPD2|729857|RANBP2-like and GRIP domain containing 2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1	0.994433	CTCF.p2:0:0.994
chr6	39833197	39833340	reg1016564.p2	8.281	+	NM_015345 AL833083 BC128388	-72450	+	TSC_hg19_v1_chr6_+_39760151 AK310941 AB002379 NM_001201427 BC047575	-73106	+	TSC_hg19_v1_chr6_+_39760140 AK091749 AX747160	-73129	+	AB527188 AJ224328 NM_005943	62117	-	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	68946	-	BC142616 AB033072 NM_020737 AK291474	721876	-	NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AK310941|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AB002379|DAAM2|23500|dishevelled associated activator of morphogenesis 2##NM_001201427|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC047575|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2	0.998391	CTCF.p2:0:0.998
chr11	79172237	79172341	reg1016268.p1	8.280	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-20565	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-886394	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-886497	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	3272609	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	3439228	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	3440485	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.727808	CTCF.p2:-10:0.728
chr2	50756891	50757024	reg1018663.p1	8.280	+	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	-182035	-	AY429104 BC096831 X68044 JN003607 BC118548 BC125270 M65085 S59900 M95489 AK292562 AK310367 NM_000145 NM_181446	-1375347	-	S57793 M63108 M73746 AK123498 NM_000233	-1774113	-	TSC_hg19_v1_chr2_-_51259258 BC046631	502301	-	EF539882 AK124726 NM_001135659 NM_004801	502647	-	BC019239 BC025376 NM_001008708 BC053896 BC017941 AK097260	3237999	+	AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##AY429104|FSHR|2492|follicle stimulating hormone receptor##BC096831|FSHR|2492|follicle stimulating hormone receptor##X68044|FSHR|2492|follicle stimulating hormone receptor##JN003607|FSHR|2492|follicle stimulating hormone receptor##BC118548|FSHR|2492|follicle stimulating hormone receptor##BC125270|FSHR|2492|follicle stimulating hormone receptor##M65085|FSHR|2492|follicle stimulating hormone receptor##S59900|FSHR|2492|follicle stimulating hormone receptor##M95489|FSHR|2492|follicle stimulating hormone receptor##AK292562|FSHR|2492|follicle stimulating hormone receptor##AK310367|FSHR|2492|follicle stimulating hormone receptor##NM_000145|FSHR|2492|follicle stimulating hormone receptor##NM_181446|FSHR|2492|follicle stimulating hormone receptor##S57793|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M63108|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M73746|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK123498|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##NM_000233|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##BC046631|NRXN1|9378|neurexin 1##EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1##BC019239|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC025376|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##NM_001008708|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC053896|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC017941|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)	0.895774	CTCF.p2:-8:0.896
chr2	71526666	71526797	reg1015972.p1	8.280	+	TSC_hg19_v1_chr2_+_71503722 AK303723 AK309221 AK293938	-23005	+	TSC_hg19_v1_chr2_-_71454205 AB032981 NM_020459	-72501	-	TSC_hg19_v1_chr2_+_71357768 AK310931 BC041084 X98494	-168946	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	32166	+	NM_001130976 NM_001130977 NM_001130978 NM_001130979 NM_001130980 NM_001130981 NM_003494 AF075575 BC171803 EU515155 EU515156 EU515157 EU515158 EU515159 EU515160	154070	+	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	167162	+	AK303723|ZNF638|27332|zinc finger protein 638##AK309221|ZNF638|27332|zinc finger protein 638##AK293938|ZNF638|27332|zinc finger protein 638##AB032981|PAIP2B|400961|poly(A) binding protein interacting protein 2B##NM_020459|PAIP2B|400961|poly(A) binding protein interacting protein 2B##AK310931|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC041084|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##X98494|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638##NM_001130976|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130977|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130978|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130979|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130980|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130981|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_003494|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AF075575|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##BC171803|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515155|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515156|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515157|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515158|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515159|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515160|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)	0.826491	CTCF.p2:14:0.826
chr2	95536199	95536343	reg1016231.p1	8.280	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3688268	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-5324553	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-5458517	+	AK097438 BC021716 NM_144705 AK296678 CU692394	979	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	155211	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	251271	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.932485	CTCF.p2:6:0.932
chr8	83355869	83355979	reg1017404.p1	8.280	+	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	-601451	-	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-711165	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-722398	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	1739535	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	1739619	+	TSC_hg19_v1_chr8_+_85095702 AK095026	1739811	+	AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like	0.946483	CTCF.p2:0:0.946
chrY	28461362	28461456	reg1016716.p2	8.280	+	AK292375 BC033041 NM_001003894 NM_001003895 NM_004680 NM_170723 AK292318 AF000981 AF080597	-693135	+	AF000980 NM_001002760 NM_001002761 NM_004678	-1263159	-	NM_001005375 NM_020364 NM_020420 NM_001005785 NM_001005786 AF414184 BC047480 BC036648 BC047617 U21663 AF248480 AF248482 AF248481 BC113005 BC113006	-1481336	+	AK289543 AK311508 NM_005840 AK125483	30639031	+	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	30752588	+	M84747 NM_002186 AK303178 BC025298 BC051337 S71404 CU690808	30868938	+	AK292375|CDY1|9085|chromodomain protein, Y-linked, 1##BC033041|CDY1|9085|chromodomain protein, Y-linked, 1##NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1##NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1##AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B##AF000981|CDY1|9085|chromodomain protein, Y-linked, 1##AF080597|CDY1|9085|chromodomain protein, Y-linked, 1##AF000980|BPY2|9083|basic charge, Y-linked, 2##NM_001002760|BPY2B|442867|basic charge, Y-linked, 2B##NM_001002761|BPY2C|442868|basic charge, Y-linked, 2C##NM_004678|BPY2|9083|basic charge, Y-linked, 2##NM_001005375|DAZ4|57135|deleted in azoospermia 4##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##NM_001005785|DAZ2|57055|deleted in azoospermia 2##NM_001005786|DAZ2|57055|deleted in azoospermia 2##AF414184|DAZ2|57055|deleted in azoospermia 2##BC047480|DAZ4|57135|deleted in azoospermia 4##BC036648|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##U21663|DAZ2|57055|deleted in azoospermia 2##AF248480|DAZ2|57055|deleted in azoospermia 2##AF248482|DAZ4|57135|deleted in azoospermia 4##AF248481|DAZ3|57054|deleted in azoospermia 3##BC113005|DAZ3|57054|deleted in azoospermia 3##BC113006|DAZ2|57055|deleted in azoospermia 2##AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7##M84747|IL9R|3581|interleukin 9 receptor##NM_002186|IL9R|3581|interleukin 9 receptor##AK303178|IL9R|3581|interleukin 9 receptor##BC025298|IL9R|3581|interleukin 9 receptor##BC051337|IL9R|3581|interleukin 9 receptor##S71404|IL9R|3581|interleukin 9 receptor	0.777273	CTCF.p2:14:0.777
chr5	116412992	116413127	reg1019526.p1	8.279	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-502545	-	TSC_hg19_v1_chr5_+_115898220 D28352	-514835	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-992338	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	1911179	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	1993752	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	1994106	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.153867	
chr6	36164125	36164299	reg1017055.p2	8.279	+	NM_002754 TSC_hg19_v1_chr6_+_36098292 AK308018 BC085196 AF004709 BC000433 BC001641 BC004428 Y10488 AF092535 U93232 AF100546 AB451221 AB451344 AB463892 BT007221 CR536490 CR541687 DQ891372 DQ894551 EU832156 EU832250 AK222922	-65898	+	TSC_hg19_v1_chr6_+_35995587 BC000092 BC031574 L35264	-168556	+	AK303414 TSC_hg19_v1_chr6_+_35995584	-168629	+	TSC_hg19_v1_chr6_+_36164569 AB033112 NM_015695	348	+	TSC_hg19_v1_chr6_-_36164979 BC042825	772	-	AK096074 NM_173676 BC103905 BC103906 BC103907 NM_001145716	46749	+	NM_002754|MAPK13|5603|mitogen-activated protein kinase 13##AK308018|MAPK13|5603|mitogen-activated protein kinase 13##BC085196|MAPK13|5603|mitogen-activated protein kinase 13##AF004709|MAPK13|5603|mitogen-activated protein kinase 13##BC000433|MAPK13|5603|mitogen-activated protein kinase 13##BC001641|MAPK13|5603|mitogen-activated protein kinase 13##BC004428|MAPK13|5603|mitogen-activated protein kinase 13##Y10488|MAPK13|5603|mitogen-activated protein kinase 13##AF092535|MAPK13|5603|mitogen-activated protein kinase 13##U93232|MAPK13|5603|mitogen-activated protein kinase 13##AF100546|MAPK13|5603|mitogen-activated protein kinase 13##AB451221|MAPK13|5603|mitogen-activated protein kinase 13##AB451344|MAPK13|5603|mitogen-activated protein kinase 13##BT007221|MAPK13|5603|mitogen-activated protein kinase 13##CR536490|MAPK13|5603|mitogen-activated protein kinase 13##CR541687|MAPK13|5603|mitogen-activated protein kinase 13##DQ891372|MAPK13|5603|mitogen-activated protein kinase 13##DQ894551|MAPK13|5603|mitogen-activated protein kinase 13##EU832156|MAPK13|5603|mitogen-activated protein kinase 13##EU832250|MAPK13|5603|mitogen-activated protein kinase 13##AK222922|MAPK13|5603|mitogen-activated protein kinase 13##BC000092|MAPK14|1432|mitogen-activated protein kinase 14##BC031574|MAPK14|1432|mitogen-activated protein kinase 14##L35264|MAPK14|1432|mitogen-activated protein kinase 14##AK303414|MAPK14|1432|mitogen-activated protein kinase 14##AB033112|BRPF3|27154|bromodomain and PHD finger containing, 3##NM_015695|BRPF3|27154|bromodomain and PHD finger containing, 3##AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1	0.542203	CTCF.p2:72:0.408
chr7	50269674	50269825	reg1018821.p1	8.279	+	NM_001161834	-134068	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	-136925	-	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-456479	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	74604	+	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	78570	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	248305	-	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1	0.843942	CTCF.p2:1:0.844
chrX	103172713	103172847	reg1016750.p1	8.279	+	AK313425 TSC_hg19_v1_chrX_-_103087160 AB036693 BC041336 BC070069 BC018033 NM_016370	-85604	-	AK312340 TSC_hg19_v1_chrX_+_103031844 AK128782 AK295374 AK295388 M54927 M27110 BC095452	-140959	+	NM_000533 NM_199478 TSC_hg19_v1_chrX_+_103031767 BC002665	-141015	+	TSC_hg19_v1_chrX_-_103174133 AK026512	1354	-	TSC_hg19_v1_chrX_+_103217225 BC093093 NM_194324 BC028039 BC054476 AK291479 BC029803 BC035660	44436	+	AY283370 BC118604 BC121816 BC038109 NM_001002916	95463	-	AK313425|RAB9B|51209|RAB9B, member RAS oncogene family##AB036693|RAB9B|51209|RAB9B, member RAS oncogene family##BC041336|RAB9B|51209|RAB9B, member RAS oncogene family##BC070069|RAB9B|51209|RAB9B, member RAS oncogene family##NM_016370|RAB9B|51209|RAB9B, member RAS oncogene family##AK312340|PLP1|5354|proteolipid protein 1##AK128782|PLP1|5354|proteolipid protein 1##AK295374|PLP1|5354|proteolipid protein 1##AK295388|PLP1|5354|proteolipid protein 1##M54927|PLP1|5354|proteolipid protein 1##M27110|PLP1|5354|proteolipid protein 1##BC095452|PLP1|5354|proteolipid protein 1##NM_000533|PLP1|5354|proteolipid protein 1##NM_199478|PLP1|5354|proteolipid protein 1##BC002665|PLP1|5354|proteolipid protein 1##AK026512|LOC100128594|100128594|uncharacterized LOC100128594##BC093093|TMSB15B|286527|thymosin beta 15B##NM_194324|TMSB15B|286527|thymosin beta 15B##BC054476|TMSB15B|286527|thymosin beta 15B##AK291479|TMSB15B|286527|thymosin beta 15B##BC029803|TMSB15B|286527|thymosin beta 15B##BC035660|TMSB15B|286527|thymosin beta 15B##AY283370|H2BFWT|158983|H2B histone family, member W, testis-specific##BC118604|H2BFWT|158983|H2B histone family, member W, testis-specific##BC121816|H2BFWT|158983|H2B histone family, member W, testis-specific##BC038109|H2BFWT|158983|H2B histone family, member W, testis-specific##NM_001002916|H2BFWT|158983|H2B histone family, member W, testis-specific	0.20064	CTCF.p2:-5:0.201
chr1	180451700	180451823	reg1015896.p2	8.278	+	NM_033343 AF179849	-252325	+	TSC_hg19_v1_chr1_+_180124047 AB384905	-327705	+	AF361868 TSC_hg19_v1_chr1_+_180124032 L42379	-327729	+	TSC_hg19_v1_chr1_-_180471976 AK314112 NM_032360	20203	-	TSC_hg19_v1_chr1_+_180601151 BC028576 NM_001135669 NM_004736	149376	+	AK309750 TSC_hg19_v1_chr1_+_180601157	149398	+	NM_033343|LHX4|89884|LIM homeobox 4##AF179849|LHX4|89884|LIM homeobox 4##AF361868|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##L42379|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##AK314112|ACBD6|84320|acyl-CoA binding domain containing 6##NM_032360|ACBD6|84320|acyl-CoA binding domain containing 6##BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AK309750|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	0.995676	CTCF.p2:0:0.996
chr18	10490808	10490929	reg1015294.p1	8.278	+	TSC_hg19_v1_chr18_+_10454634 AK300743	-36216	+	TSC_hg19_v1_chr18_+_10454623 AB056722 AB104887 NM_153000	-36246	+	BC053324 TSC_hg19_v1_chr18_+_10454599	-36298	+	TSC_hg19_v1_chr18_+_10526021 NM_003826	35073	+	TSC_hg19_v1_chr18_+_10526033 AK294038 U78107 AK314495	35160	+	TSC_hg19_v1_chr18_+_10526051 BC001889	35188	+	AK300743|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AB056722|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AB104887|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##NM_153000|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##BC053324|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##NM_003826|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK294038|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##U78107|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK314495|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma	0.056514	
chr9	127314129	127314276	reg1017805.p1	8.278	+	TSC_hg19_v1_chr9_-_127269711 BC032501 NM_004959	-44498	-	AY278562 NM_001161808	-100780	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	-136482	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	106502	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	219308	-	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	225298	+	BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144##BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A	0.832374	CTCF.p2:-3:0.832
chr10	3777421	3777565	reg1018827.p1	8.277	+	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-562488	-	CU678866 TSC_hg19_v1_chr10_-_3214975 AB384562 BC005025 AK225084 AK293788 AK315117 AK294865 AK299464 AK303406 BC095422 BX649017 AF061243	-562523	-	BC045577 TSC_hg19_v1_chr10_-_3214936	-562568	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	49818	-	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	50016	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1090925	+	BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC005025|PITRM1|10531|pitrilysin metallopeptidase 1##AK225084|PITRM1|10531|pitrilysin metallopeptidase 1##AK293788|PITRM1|10531|pitrilysin metallopeptidase 1##AK315117|PITRM1|10531|pitrilysin metallopeptidase 1##AK294865|PITRM1|10531|pitrilysin metallopeptidase 1##AK299464|PITRM1|10531|pitrilysin metallopeptidase 1##AK303406|PITRM1|10531|pitrilysin metallopeptidase 1##BC095422|PITRM1|10531|pitrilysin metallopeptidase 1##BX649017|PITRM1|10531|pitrilysin metallopeptidase 1##AF061243|PITRM1|10531|pitrilysin metallopeptidase 1##BC045577|PITRM1|10531|pitrilysin metallopeptidase 1##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2	0.0	
chr3	53254037	53254143	reg1014022.p1	8.277	+	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	-58871	+	TSC_hg19_v1_chr3_-_53164452 AJ318099 BC043595 NM_052859	-89639	-	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	-174027	-	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	35921	-	TSC_hg19_v1_chr3_-_53290099 NM_001064 NM_001135055	36024	-	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	127503	-	BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##AJ318099|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043595|RFT1|91869|RFT1 homolog (S. cerevisiae)##NM_052859|RFT1|91869|RFT1 homolog (S. cerevisiae)##AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase##NM_001064|TKT|7086|transketolase##NM_001135055|TKT|7086|transketolase##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	0.261345	CTCF.p2:5:0.231
chrX	12789725	12789855	reg1017603.p1	8.277	+	AB002314 NM_014728 AK289694	-633200	+	NM_006800 AK025642	-1012043	+	NM_001193270 AK300814	-1013073	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	19707	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	19778	+	AK313858 BC033651 NM_016562 AF240467 AF245702	95408	+	AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7	1.024328	CTCF.p2:-19:0.992
chr16	56707991	56708119	reg1015791.p1	8.276	+	BC008408 NM_005951 BC059780 X64177 BC146930 BC146934 BT007171 S68948	-4295	+	AB528657 S68954 BC035287 BC048334 BC005311 BC020757 NM_005950 TSC_hg19_v1_chr16_-_56701976	-6111	-	BC029453 NM_005949	-16201	+	TSC_hg19_v1_chr16_+_56716381 AK311284 AK311373 NM_005952 BC032131 BC032338 BC018190 BC053882 BC029916 X76717 AB528765 S68956	8360	+	NM_014669 TSC_hg19_v1_chr16_+_56764040	55976	+	TSC_hg19_v1_chr16_+_56764089 D42085 AF086282 BC034346 AK292262	56030	+	BC008408|MT1H|4496|metallothionein 1H##NM_005951|MT1H|4496|metallothionein 1H##BC059780|MT1H|4496|metallothionein 1H##X64177|MT1H|4496|metallothionein 1H##BC146930|MT1H|4496|metallothionein 1H##BC146934|MT1H|4496|metallothionein 1H##BT007171|MT1H|4496|metallothionein 1H##S68948|MT1H|4496|metallothionein 1H##S68954|MT1G|4495|metallothionein 1G##BC035287|MT1G|4495|metallothionein 1G##BC005311|MT1G|4495|metallothionein 1G##BC020757|MT1G|4495|metallothionein 1G##NM_005950|MT1G|4495|metallothionein 1G##BC029453|MT1F|4494|metallothionein 1F##NM_005949|MT1F|4494|metallothionein 1F##NM_005952|MT1X|4501|metallothionein 1X##BC032131|MT1X|4501|metallothionein 1X##BC032338|MT1X|4501|metallothionein 1X##BC018190|MT1X|4501|metallothionein 1X##BC053882|MT1X|4501|metallothionein 1X##BC029916|MT1X|4501|metallothionein 1X##X76717|MT1X|4501|metallothionein 1X##S68956|MT1X|4501|metallothionein 1X##NM_014669|NUP93|9688|nucleoporin 93kDa##D42085|NUP93|9688|nucleoporin 93kDa##AF086282|NUP93|9688|nucleoporin 93kDa##BC034346|NUP93|9688|nucleoporin 93kDa##AK292262|NUP93|9688|nucleoporin 93kDa	0.0	
chr11	56608839	56608981	reg1018035.p1	8.275	+	NM_001005284	-97624	-	AB463984 NM_001005213 NM_001013358	-141049	+	BC140745 NM_001004730	-177761	+	BC137198 NM_001005323	147457	+	AK127591 NM_001005210 BC136737 BC136739 BC150572	340389	+	AK075252 BC032688 AK315542 AK074514 X89271 NM_005161	395890	-	NM_001005284|OR9G4|283189|olfactory receptor, family 9, subfamily G, member 4##NM_001005213|OR9G1|390174|olfactory receptor, family 9, subfamily G, member 1##NM_001013358|OR9G9|504191|olfactory receptor, family 9, subfamily G, member 9##BC140745|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1##NM_001004730|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1##BC137198|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##NM_001005323|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##AK127591|LRRC55|219527|leucine rich repeat containing 55##NM_001005210|LRRC55|219527|leucine rich repeat containing 55##BC136737|LRRC55|219527|leucine rich repeat containing 55##BC136739|LRRC55|219527|leucine rich repeat containing 55##BC150572|LRRC55|219527|leucine rich repeat containing 55##AK075252|APLNR|187|apelin receptor##BC032688|APLNR|187|apelin receptor##AK315542|APLNR|187|apelin receptor##AK074514|APLNR|187|apelin receptor##X89271|APLNR|187|apelin receptor##NM_005161|APLNR|187|apelin receptor	0.563665	CTCF.p2:-29:0.564
chr10	49718070	49718199	reg1012853.p1	8.273	+	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	-108462	+	TSC_hg19_v1_chr10_+_49514722 AK292523	-203348	+	CR749241 NM_001018071	-235208	-	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	94953	-	TSC_hg19_v1_chr10_-_49864302 AK055937	146171	-	TSC_hg19_v1_chr10_+_49892917 BC034937	174756	+	BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##AK292523|MAPK8|5599|mitogen-activated protein kinase 8##CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22##AK055937|ARHGAP22|58504|Rho GTPase activating protein 22##BC034937|WDFY4|57705|WDFY family member 4	0.574254	CTCF.p2:31:0.574
chr12	40086135	40086277	reg1016515.p1	8.273	+	BC038754 NM_001031748 BC048120 AK097445	-66211	+	AK314254 NM_005164	-72364	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	-249207	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	413483	-	TSC_hg19_v1_chr12_-_40499870 BC047507	413666	-	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	532653	+	BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2	0.983342	CTCF.p2:21:0.983
chr14	62391806	62391936	reg1019549.p1	8.272	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	-162752	+	FJ790247 NM_001243084	-227532	+	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	-229681	+	AJ617628 NM_031914 BC117363 BC143598 HQ258344 AB102949	70767	+	TSC_hg19_v1_chr14_+_62584125 BX248751	192287	+	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	1120058	-	AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AJ617628|SYT16|83851|synaptotagmin XVI##NM_031914|SYT16|83851|synaptotagmin XVI##BC117363|SYT16|83851|synaptotagmin XVI##BC143598|SYT16|83851|synaptotagmin XVI##HQ258344|SYT16|83851|synaptotagmin XVI##AB102949|SYT16|83851|synaptotagmin XVI##BX248751|FLJ43390|646113|uncharacterized LOC646113##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5	0.614104	CTCF.p2:-3:0.614
chr19	56765248	56765382	reg1017405.p1	8.272	+	BC002636 NM_024303 AK098700	-25647	-	NM_001080456	-60895	-	AF188492 AF188493 NM_001145546 NM_033106	-77927	+	BX647919 AK097128 TSC_hg19_v1_chr19_+_56879704 AL833621 BC064603 BC089419	114401	+	TSC_hg19_v1_chr19_-_56904904 AK055489 NM_144690 AK299036 BC056238 AK316028	139577	-	NM_001159860	150067	+	BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_001080456|ZSCAN5B|342933|zinc finger and SCAN domain containing 5B##AF188492|GALP|85569|galanin-like peptide##AF188493|GALP|85569|galanin-like peptide##NM_001145546|GALP|85569|galanin-like peptide##NM_033106|GALP|85569|galanin-like peptide##BX647919|ZNF542|147947|zinc finger protein 542##AK097128|ZNF542|147947|zinc finger protein 542##AL833621|ZNF542|147947|zinc finger protein 542##BC064603|ZNF542|147947|zinc finger protein 542##BC089419|ZNF542|147947|zinc finger protein 542##AK055489|ZNF582|147948|zinc finger protein 582##NM_144690|ZNF582|147948|zinc finger protein 582##AK299036|ZNF582|147948|zinc finger protein 582##BC056238|ZNF582|147948|zinc finger protein 582##AK316028|ZNF582|147948|zinc finger protein 582##NM_001159860|ZNF583|147949|zinc finger protein 583	0.999211	CTCF.p2:-13:0.999
chrX	34319138	34319259	reg1018645.p1	8.272	+	BC026171 AK292354 NM_203408	-168762	-	NM_000109	-961473	-	S60972 X14298 AK309142 TSC_hg19_v1_chrX_-_33229631 M18533 BC010932 NM_004006	-1089648	-	TSC_hg19_v1_chrX_-_34675406 BC039242 NM_031442	356210	-	BC035026 NM_152631 AK093101 AX747923 CU690032	641731	+	NM_001099921	1497260	+	BC026171|FAM47A|158724|family with sequence similarity 47, member A##AK292354|FAM47A|158724|family with sequence similarity 47, member A##NM_203408|FAM47A|158724|family with sequence similarity 47, member A##NM_000109|DMD|1756|dystrophin##S60972|DMD|1756|dystrophin##X14298|DMD|1756|dystrophin##AK309142|DMD|1756|dystrophin##M18533|DMD|1756|dystrophin##BC010932|DMD|1756|dystrophin##NM_004006|DMD|1756|dystrophin##BC039242|TMEM47|83604|transmembrane protein 47##NM_031442|TMEM47|83604|transmembrane protein 47##BC035026|FAM47B|170062|family with sequence similarity 47, member B##NM_152631|FAM47B|170062|family with sequence similarity 47, member B##AK093101|FAM47B|170062|family with sequence similarity 47, member B##NM_001099921|MAGEB16|139604|melanoma antigen family B, 16	0.982348	CTCF.p2:4:0.982
chr16	21813252	21813392	reg1018125.p1	8.271	+	AK093062 AX747895 NM_170664 BC040551 AK302733	-97005	+	AK125840 NM_001161683	-117573	+	BC129993 NM_144672 BC129992	-123487	+	BC009198 BC068999 TSC_hg19_v1_chr16_-_21831777 BC070157	18438	-	AK316459 AK296301 AK303500 AK301703 AK294452 TSC_hg19_v1_chr16_-_21854901	41506	-	NM_003366 AK307535 TSC_hg19_v1_chr16_+_21964618	151306	+	AK093062|OTOA|146183|otoancorin##NM_170664|OTOA|146183|otoancorin##BC040551|OTOA|146183|otoancorin##AK302733|OTOA|146183|otoancorin##AK125840|OTOA|146183|otoancorin##NM_001161683|OTOA|146183|otoancorin##BC129993|OTOA|146183|otoancorin##NM_144672|OTOA|146183|otoancorin##BC129992|OTOA|146183|otoancorin##BC009198|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC068999|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC070157|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##AK316459|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296301|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AK303500|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK301703|LOC613037|613037|nuclear pore complex interacting protein pseudogene##AK294452|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_003366|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##AK307535|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II	0.93167	CTCF.p2:9:0.932
chr3	192162417	192162516	reg1015238.p1	8.271	+	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-35623	-	AY858112 NM_001083308	-983515	+	AK090630 AX746546 NM_198152	-1114142	-	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	282899	-	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	473170	-	BC036194 BC045582 NM_178496	473475	-	AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing##AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2	0.992338	CTCF.p2:23:0.992
chr12	27788386	27788535	reg1017529.p1	8.270	+	NM_001198915 NM_001198916 NM_003622 NM_177444 TSC_hg19_v1_chr12_+_27677138 BC022873 BC001560 AK294267 AB033056 BC050281 AB049149 AK314350 AF034802 BC046159	-111325	+	NM_001145010	-168718	+	BC043511 TSC_hg19_v1_chr12_-_27599649	-188856	-	NM_001029874 BC140921 AY662682	61003	+	NM_001190864 NM_021821 TSC_hg19_v1_chr12_+_27863756 AF182422	75272	+	TSC_hg19_v1_chr12_+_27863764 BC015862 AK075378 AK075515 BC109372 BC063515 BC028346	75314	+	NM_001198915|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_001198916|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_003622|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_177444|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC022873|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC001560|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK294267|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB033056|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC050281|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB049149|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK314350|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AF034802|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC046159|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_001145010|C12orf70|341346|chromosome 12 open reading frame 70##BC043511|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001029874|REP15|387849|RAB15 effector protein##BC140921|REP15|387849|RAB15 effector protein##AY662682|REP15|387849|RAB15 effector protein##NM_001190864|MRPS35|60488|mitochondrial ribosomal protein S35##NM_021821|MRPS35|60488|mitochondrial ribosomal protein S35##AF182422|MRPS35|60488|mitochondrial ribosomal protein S35##BC015862|MRPS35|60488|mitochondrial ribosomal protein S35##AK075378|MRPS35|60488|mitochondrial ribosomal protein S35##AK075515|MRPS35|60488|mitochondrial ribosomal protein S35##BC109372|MRPS35|60488|mitochondrial ribosomal protein S35##BC063515|MRPS35|60488|mitochondrial ribosomal protein S35##BC028346|MRPS35|60488|mitochondrial ribosomal protein S35	0.958766	CTCF.p2:33:0.959
chr5	160397932	160398051	reg1016077.p1	8.270	+	AB018258 AK295081 AK090832 AX746642 NM_025153	-118860	-	AK025130 TSC_hg19_v1_chr5_-_160112393	-285652	-	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-549088	+	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	577135	-	NM_000811	714666	+	AK289792 NM_000806 AK295160	876250	+	AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##AK025130|ATP10B|23120|ATPase, class V, type 10B##BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6##AK289792|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_000806|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK295160|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	0.469637	CTCF.p2:-8:0.470
chr2	203735488	203735614	reg1015444.p1	8.269	+	AB053315 TSC_hg19_v1_chr2_+_203500263	-235314	+	TSC_hg19_v1_chr2_+_203499820 NM_173511	-235692	+	TSC_hg19_v1_chr2_+_203499703 AK096090	-235862	+	AK055978 AB053316 TSC_hg19_v1_chr2_-_203736166	527	-	TSC_hg19_v1_chr2_-_203736185 NM_178231	638	-	TSC_hg19_v1_chr2_-_203736227 AL833904 BC063876 NM_138468	745	-	AB053315|FAM117B|150864|family with sequence similarity 117, member B##NM_173511|FAM117B|150864|family with sequence similarity 117, member B##AK096090|FAM117B|150864|family with sequence similarity 117, member B##AK055978|ICA1L|130026|islet cell autoantigen 1,69kDa-like##AB053316|ICA1L|130026|islet cell autoantigen 1,69kDa-like##NM_178231|ICA1L|130026|islet cell autoantigen 1,69kDa-like##AL833904|ICA1L|130026|islet cell autoantigen 1,69kDa-like##BC063876|ICA1L|130026|islet cell autoantigen 1,69kDa-like##NM_138468|ICA1L|130026|islet cell autoantigen 1,69kDa-like	0.122058	
chr4	119786407	119786543	reg1016524.p2	8.269	+	TSC_hg19_v1_chr4_-_119757290 NM_014822	-29134	-	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	-29248	-	TSC_hg19_v1_chr4_+_119606557 AK055555 AB046847 BC006565 BC007449 NM_020961 AB384254 CU675451	-179864	+	TSC_hg19_v1_chr4_+_119810008 AL833547 NM_001128933 NM_001128934 NM_133477 BC150629 AK307711 CR936673 AK304121 AL832031 AL833294 AL832363 BC136256 AM392848 AM393854 EU481975	23609	+	BX647849 TSC_hg19_v1_chr4_+_119947854	161360	+	FN422000 TSC_hg19_v1_chr4_+_119948273	161798	+	NM_014822|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AK055555|METTL14|57721|methyltransferase like 14##AB046847|METTL14|57721|methyltransferase like 14##BC006565|METTL14|57721|methyltransferase like 14##BC007449|METTL14|57721|methyltransferase like 14##NM_020961|METTL14|57721|methyltransferase like 14##AL833547|SYNPO2|171024|synaptopodin 2##NM_001128933|SYNPO2|171024|synaptopodin 2##NM_001128934|SYNPO2|171024|synaptopodin 2##NM_133477|SYNPO2|171024|synaptopodin 2##BC150629|SYNPO2|171024|synaptopodin 2##AK307711|SYNPO2|171024|synaptopodin 2##CR936673|SYNPO2|171024|synaptopodin 2##AK304121|SYNPO2|171024|synaptopodin 2##AL832031|SYNPO2|171024|synaptopodin 2##AL833294|SYNPO2|171024|synaptopodin 2##AL832363|SYNPO2|171024|synaptopodin 2##BC136256|SYNPO2|171024|synaptopodin 2##AM392848|SYNPO2|171024|synaptopodin 2##AM393854|SYNPO2|171024|synaptopodin 2##EU481975|SYNPO2|171024|synaptopodin 2##BX647849|SYNPO2|171024|synaptopodin 2##FN422000|SYNPO2|171024|synaptopodin 2	0.694662	CTCF.p2:-6:0.695
chr8	21772939	21773079	reg1016664.p2	8.269	+	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	-1844	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	-126643	-	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	-127217	-	TSC_hg19_v1_chr8_+_21777194 NM_015024 BC030785	4180	+	TSC_hg19_v1_chr8_+_21777257 AK291472 AB018288 AF064729 CU689010	4239	+	TSC_hg19_v1_chr8_+_21881644 AK094267	108626	+	AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##NM_015024|XPO7|23039|exportin 7##BC030785|XPO7|23039|exportin 7##AK291472|XPO7|23039|exportin 7##AB018288|XPO7|23039|exportin 7##AF064729|XPO7|23039|exportin 7##AK094267|NPM2|10361|nucleophosmin/nucleoplasmin 2	0.747429	CTCF.p2:-3:0.747
chr18	50430369	50430497	reg1018024.p1	8.266	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-563320	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-563892	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-1706393	-	TSC_hg19_v1_chr18_-_51690988 AL110266	1260559	-	AF072246 TSC_hg19_v1_chr18_-_51750614	1320104	-	TSC_hg19_v1_chr18_-_51750997 BC032638	1320532	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	0.953144	CTCF.p2:-2:0.953
chr3	184261879	184261979	reg1015993.p1	8.266	+	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	-163889	+	BC130322 BC136338 BC143982 L33410 NM_000460 NM_001177597 NM_001177598 TSC_hg19_v1_chr3_-_184095936	-165991	-	TSC_hg19_v1_chr3_+_184081196 NM_006232 Z49199 BC000739 AB464044 EU446997	-180700	+	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	17653	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	167834	-	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	267994	+	AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##BC130322|THPO|7066|thrombopoietin##BC136338|THPO|7066|thrombopoietin##BC143982|THPO|7066|thrombopoietin##L33410|THPO|7066|thrombopoietin##NM_000460|THPO|7066|thrombopoietin##NM_001177597|THPO|7066|thrombopoietin##NM_001177598|THPO|7066|thrombopoietin##NM_006232|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##Z49199|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##BC000739|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##EU446997|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3##AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)	0.9975	CTCF.p2:18:0.998
chr11	67415716	67415856	reg1016950.p1	8.265	+	BC113485 BC113487 AY229977 NM_005995	-8759	-	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	-18383	-	BC007619 TSC_hg19_v1_chr11_+_67377037	-38805	+	AY032593 AY040761 AY169233 BC008689 NM_080658	2332	-	AK299956 TSC_hg19_v1_chr11_-_67442068	26257	-	TSC_hg19_v1_chr11_-_67442086 AK309277 NM_000695 AK092464	26345	-	BC113485|TBX10|347853|T-box 10##BC113487|TBX10|347853|T-box 10##AY229977|TBX10|347853|T-box 10##NM_005995|TBX10|347853|T-box 10##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC007619|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AY032593|ACY3|91703|aspartoacylase (aminocyclase) 3##AY040761|ACY3|91703|aspartoacylase (aminocyclase) 3##AY169233|ACY3|91703|aspartoacylase (aminocyclase) 3##BC008689|ACY3|91703|aspartoacylase (aminocyclase) 3##NM_080658|ACY3|91703|aspartoacylase (aminocyclase) 3##AK299956|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	0.706773	CTCF.p2:-3:0.248	CTCF.p2:28:0.459
chr11	82406882	82406992	reg1012498.p1	8.265	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-3255213	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-4121042	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-4121145	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	37961	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	204580	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	205837	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.949145	CTCF.p2:44:0.859
chr1	203135737	203135838	reg1015456.p1	8.265	+	TSC_hg19_v1_chr1_+_203097427 AK295584 AK308733 AK293647 AK316106	-38342	+	AK289928 NM_000674 NM_001048230 AK095060 BC026340	-38940	+	NM_002479	-80411	-	L05606 BC044226 NM_004997 TSC_hg19_v1_chr1_-_203144955	9145	-	AB209459 TSC_hg19_v1_chr1_-_203154361	18547	-	TSC_hg19_v1_chr1_-_203155807 BT007223 CU678995 DQ890777 DQ893937 EU831608 EU831695 BC038354	19990	-	AK295584|ADORA1|134|adenosine A1 receptor##AK308733|ADORA1|134|adenosine A1 receptor##AK289928|ADORA1|134|adenosine A1 receptor##NM_000674|ADORA1|134|adenosine A1 receptor##NM_001048230|ADORA1|134|adenosine A1 receptor##AK095060|ADORA1|134|adenosine A1 receptor##BC026340|ADORA1|134|adenosine A1 receptor##NM_002479|MYOG|4656|myogenin (myogenic factor 4)##L05606|MYBPH|4608|myosin binding protein H##BC044226|MYBPH|4608|myosin binding protein H##NM_004997|MYBPH|4608|myosin binding protein H##AB209459|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BT007223|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ890777|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ893937|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##EU831608|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##EU831695|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC038354|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	0.429391	CTCF.p2:2:0.429
chr15	76527698	76527817	reg1015760.p2	8.265	+	TSC_hg19_v1_chr15_+_76352323 AK056777 AK308676	-175428	+	TSC_hg19_v1_chr15_+_76352281 AK095509 NM_152335	-175468	+	AK311204 TSC_hg19_v1_chr15_-_76352131	-175655	-	BT009796 J04058 TSC_hg19_v1_chr15_-_76603737 AB529049 BC095457	75975	-	TSC_hg19_v1_chr15_-_76603771 AK300044 BC015526 D28380	76008	-	TSC_hg19_v1_chr15_-_76603791 BC029995	76040	-	AK308676|C15orf27|123591|chromosome 15 open reading frame 27##AK095509|C15orf27|123591|chromosome 15 open reading frame 27##NM_152335|C15orf27|123591|chromosome 15 open reading frame 27##AK311204|NRG4|145957|neuregulin 4##BT009796|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##J04058|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC095457|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##AK300044|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC015526|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC029995|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide	0.979301	CTCF.p2:-8:0.979
chr18	51654244	51654388	reg1016010.p1	8.265	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-1787203	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-1787775	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-2930276	-	TSC_hg19_v1_chr18_-_51690988 AL110266	36676	-	AF072246 TSC_hg19_v1_chr18_-_51750614	96221	-	TSC_hg19_v1_chr18_-_51750997 BC032638	96649	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	0.417997	CTCF.p2:30:0.418
chr18	61705179	61705300	reg1015525.p1	8.265	+	NM_001031848 NM_002640 NM_198833 AK300391 L40377 TSC_hg19_v1_chr18_+_61637345 BC034528 U92984 BX571754 AK313782	-67926	+	NM_001123366	-88652	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	-122495	+	AJ007611 NM_033646	1712248	+	TSC_hg19_v1_chr18_+_63417845 BC036786	1712627	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	1712963	+	NM_001031848|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_002640|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_198833|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK300391|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##L40377|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BC034528|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##U92984|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BX571754|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK313782|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2	0.987322	CTCF.p2:-10:0.987
chr4	159174642	159174765	reg1015850.p2	8.265	+	BC036551 BC048117 BC054487 TSC_hg19_v1_chr4_+_159131677 BC060875 BC035811 BC026318	-43029	+	NM_018342	-43303	+	AY358785 AK172805 BC043193 NM_001031700 NM_001128424	-80521	-	NM_001253727 NM_001253728 NM_001253729 NM_001253730 NM_001253732 NM_001253733 NM_021634 BX647985 BX647975 BX647980 AK307889 AK300379 AK312470 TSC_hg19_v1_chr4_+_159443033 AK295040 BC113617 BC143557 BC143558 BC143559 BC112142 BC143556 AK294694 AB208943 AF190500 AY899848 AY899849 AY899850 HQ258496	268293	+	TSC_hg19_v1_chr4_-_159593035 AK027539 BC065017 BC094775 NM_001008393	418387	-	TSC_hg19_v1_chr4_+_159593447 AK314803 NM_004453 BC011890 AK311435 BX538129 AK304838 S69232 EU093082 EU093083	418691	+	BC036551|TMEM144|55314|transmembrane protein 144##BC048117|TMEM144|55314|transmembrane protein 144##BC054487|TMEM144|55314|transmembrane protein 144##BC060875|TMEM144|55314|transmembrane protein 144##BC035811|TMEM144|55314|transmembrane protein 144##BC026318|TMEM144|55314|transmembrane protein 144##NM_018342|TMEM144|55314|transmembrane protein 144##AY358785|FAM198B|51313|family with sequence similarity 198, member B##AK172805|FAM198B|51313|family with sequence similarity 198, member B##BC043193|FAM198B|51313|family with sequence similarity 198, member B##NM_001031700|FAM198B|51313|family with sequence similarity 198, member B##NM_001128424|FAM198B|51313|family with sequence similarity 198, member B##NM_001253727|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253728|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253729|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253730|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253732|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253733|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_021634|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647985|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647975|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647980|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK307889|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK300379|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK312470|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK295040|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC113617|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143557|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143558|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143559|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC112142|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143556|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK294694|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AB208943|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AF190500|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899848|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899849|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899850|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##HQ258496|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK027539|C4orf46|201725|chromosome 4 open reading frame 46##BC065017|C4orf46|201725|chromosome 4 open reading frame 46##BC094775|C4orf46|201725|chromosome 4 open reading frame 46##NM_001008393|C4orf46|201725|chromosome 4 open reading frame 46##AK314803|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##NM_004453|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BC011890|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BX538129|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##AK304838|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##S69232|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093082|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093083|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase	0.998306	CTCF.p2:-6:0.998
chr12	85423326	85423459	reg1016360.p2	8.263	+	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	-116800	-	TSC_hg19_v1_chr12_-_85306575 BC022253 BC070040	-116820	-	AK291207 AK022853 TSC_hg19_v1_chr12_-_85306547	-116849	-	AK126325 NM_001100917	6662	-	AK022365 NM_001079910 BC005399 BC093088 AK307799	6731	+	U31986 TSC_hg19_v1_chr12_+_85673999 BC010923 NM_006982	250567	+	AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC022253|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC070040|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK291207|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK022853|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK126325|TSPAN19|144448|tetraspanin 19##NM_001100917|TSPAN19|144448|tetraspanin 19##AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##U31986|ALX1|8092|ALX homeobox 1##BC010923|ALX1|8092|ALX homeobox 1##NM_006982|ALX1|8092|ALX homeobox 1	0.98808	CTCF.p2:26:0.988
chr12	41315463	41315588	reg1014390.p1	8.262	+	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	-229243	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	-696666	+	TSC_hg19_v1_chr12_-_40499870 BC047507	-815653	-	TSC_hg19_v1_chr12_+_41582170 NM_001164595	266683	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	516062	+	TSC_hg19_v1_chr12_-_42538503 AK125141 NM_001099650 NM_173601 BC030023	1223054	-	AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4##AK125141|GXYLT1|283464|glucoside xylosyltransferase 1##NM_001099650|GXYLT1|283464|glucoside xylosyltransferase 1##NM_173601|GXYLT1|283464|glucoside xylosyltransferase 1##BC030023|GXYLT1|283464|glucoside xylosyltransferase 1	0.983131	CTCF.p2:34:0.983
chr16	82705432	82705560	reg1015097.p1	8.262	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-44827	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	-44907	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	-45102	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	1136104	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	1136160	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	1227273	+	AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase	0.998923	CTCF.p2:6:0.999
chr19	4589743	4589848	reg1015748.p1	8.262	+	BC142617 TSC_hg19_v1_chr19_-_4559731 AK300037 NM_032108	-30054	-	AK127689 BC070198 TSC_hg19_v1_chr19_-_4540114	-49695	-	AF403428 NM_052972 BC034389 AB073607 AK027382 AK303861 AK314506 TSC_hg19_v1_chr19_-_4540049	-49751	-	NM_152362 TSC_hg19_v1_chr19_+_4639539 BC017672 AK097251	49743	+	NM_001167942	50233	+	BC003639 AL365373 AL365374 AF282264 AB590867 BC014655 AK098829 TSC_hg19_v1_chr19_-_4670355	80548	-	BC142617|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##AK300037|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##NM_032108|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##BC070198|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AF403428|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_052972|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##BC034389|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AB073607|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK027382|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK303861|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK314506|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_152362|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC017672|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##AK097251|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##NM_001167942|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC003639|C19orf10|56005|chromosome 19 open reading frame 10##AL365373|C19orf10|56005|chromosome 19 open reading frame 10##AL365374|C19orf10|56005|chromosome 19 open reading frame 10##AF282264|C19orf10|56005|chromosome 19 open reading frame 10##BC014655|C19orf10|56005|chromosome 19 open reading frame 10##AK098829|C19orf10|56005|chromosome 19 open reading frame 10	0.211199	
chr5	94304948	94305122	reg1010066.p2	8.262	+	AK025997 TSC_hg19_v1_chr5_-_94224607	-80429	-	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	-350662	+	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	-350778	-	AY656716 AK058012 BC030005 AK057694 TSC_hg19_v1_chr5_-_94417350	112233	-	NM_001002796	112509	-	TSC_hg19_v1_chr5_-_94620306 AY656715 NM_024717	315258	-	AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1##BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1##AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1##BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1##AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_001002796|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656715|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_024717|MCTP1|79772|multiple C2 domains, transmembrane 1	0.880379	CTCF.p2:5:0.880
chr7	33784010	33784114	reg1009758.p1	8.262	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-614981	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-635085	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-681740	-	AK289963 NM_133468 AK096150 BC060868	161080	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	913857	+	DQ287932 NM_015283	1293590	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	0.870336	CTCF.p2:7:0.870
chr12	3053869	3054019	reg1016386.p2	8.261	+	TSC_hg19_v1_chr12_+_3000056 AK024246 NM_001160408 NM_003324 AK293285 AK307434 AF045583 BC032587 CU689434 AB464323 EU446713	-53891	+	TSC_hg19_v1_chr12_-_2986314 NM_001243088 NM_001243089 NM_021953 NM_202002 NM_202003	-67487	-	TSC_hg19_v1_chr12_+_2986385 NM_001252499 NM_001252500 AB073599 AK021945 AK299990 AK304613 AK315364 BC005106	-67555	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	14650	+	TSC_hg19_v1_chr12_+_3069109 BX640921	15117	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	132618	+	AK024246|TULP3|7289|tubby like protein 3##NM_001160408|TULP3|7289|tubby like protein 3##NM_003324|TULP3|7289|tubby like protein 3##AK293285|TULP3|7289|tubby like protein 3##AK307434|TULP3|7289|tubby like protein 3##AF045583|TULP3|7289|tubby like protein 3##BC032587|TULP3|7289|tubby like protein 3##EU446713|TULP3|7289|tubby like protein 3##NM_001243088|FOXM1|2305|forkhead box M1##NM_001243089|FOXM1|2305|forkhead box M1##NM_021953|FOXM1|2305|forkhead box M1##NM_202002|FOXM1|2305|forkhead box M1##NM_202003|FOXM1|2305|forkhead box M1##NM_001252499|C12orf32|83695|chromosome 12 open reading frame 32##NM_001252500|C12orf32|83695|chromosome 12 open reading frame 32##AB073599|C12orf32|83695|chromosome 12 open reading frame 32##AK021945|C12orf32|83695|chromosome 12 open reading frame 32##AK304613|C12orf32|83695|chromosome 12 open reading frame 32##AK315364|C12orf32|83695|chromosome 12 open reading frame 32##BC005106|C12orf32|83695|chromosome 12 open reading frame 32##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##BX640921|TEAD4|7004|TEA domain family member 4##NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9	0.831449	CTCF.p2:18:0.831
chr1	31807989	31808126	reg1016577.p1	8.261	+	TSC_hg19_v1_chr1_+_31769878 AK024049 AK307478 AF151085 AK001929 AK302248 AK302343 BC050609 BC007446 AF151077 BC000685 AF247661	-38134	+	TSC_hg19_v1_chr1_+_31769844 AK022506 NM_016505	-38222	+	DQ893627 DQ895442 TSC_hg19_v1_chr1_-_31769633 AK313800 AF090988 AK074516 EF011621 BC001494 NM_004814 AK298823	-38427	-	S67314 AK314122 BT006727 CR456867 DQ893154 DQ896449 Y10255 X56549 BC007021 NM_004102	37813	-	AK127659 NM_001199038	74354	+	NM_001199037 AK298512	74976	+	AK024049|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK307478|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AF151085|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK001929|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK302248|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK302343|ZCCHC17|51538|zinc finger, CCHC domain containing 17##BC050609|ZCCHC17|51538|zinc finger, CCHC domain containing 17##BC007446|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AF151077|ZCCHC17|51538|zinc finger, CCHC domain containing 17##BC000685|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AF247661|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK022506|ZCCHC17|51538|zinc finger, CCHC domain containing 17##NM_016505|ZCCHC17|51538|zinc finger, CCHC domain containing 17##DQ893627|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##DQ895442|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK313800|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AF090988|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK074516|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##EF011621|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##BC001494|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##NM_004814|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK298823|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##S67314|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##AK314122|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##BT006727|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##CR456867|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##DQ893154|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##DQ896449|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##Y10255|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##X56549|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##BC007021|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##NM_004102|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##AK127659|SERINC2|347735|serine incorporator 2##NM_001199038|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2	0.995422	CTCF.p2:9:0.995
chr4	122577470	122577612	reg1016665.p2	8.260	+	TSC_hg19_v1_chr4_-_122302115 NM_198179 AK309337	-275379	-	AK303192 NM_001244764	-428921	-	AK301058 NM_001128843	-439760	-	BC012804 BC012822 TSC_hg19_v1_chr4_-_122618109 BC004993 X12454 D00172 M21731	40571	-	TSC_hg19_v1_chr4_-_122618136 AK297909 M19384 BC018671 BC032093	40592	-	TSC_hg19_v1_chr4_-_122618148 J03745 AK312644 NM_001154	40615	-	NM_198179|QRFPR|84109|pyroglutamylated RFamide peptide receptor##AK309337|QRFPR|84109|pyroglutamylated RFamide peptide receptor##AK303192|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3##AK301058|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3##BC012804|ANXA5|308|annexin A5##BC012822|ANXA5|308|annexin A5##BC004993|ANXA5|308|annexin A5##X12454|ANXA5|308|annexin A5##D00172|ANXA5|308|annexin A5##M21731|ANXA5|308|annexin A5##AK297909|ANXA5|308|annexin A5##M19384|ANXA5|308|annexin A5##BC018671|ANXA5|308|annexin A5##BC032093|ANXA5|308|annexin A5##J03745|ANXA5|308|annexin A5##AK312644|ANXA5|308|annexin A5##NM_001154|ANXA5|308|annexin A5	0.271156	CTCF.p2:-11:0.271
chr8	80979487	80979645	reg1017951.p1	8.260	+	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	-37064	-	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	-299569	-	AK292737 TSC_hg19_v1_chr8_+_80523376 BC006302 S82024 AB528346 BT020034 CR456833 DQ892719 DQ895968 CU675343	-456163	+	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	13463	-	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	104204	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	418918	+	AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK292737|STMN2|11075|stathmin-like 2##BC006302|STMN2|11075|stathmin-like 2##S82024|STMN2|11075|stathmin-like 2##BT020034|STMN2|11075|stathmin-like 2##CR456833|STMN2|11075|stathmin-like 2##DQ892719|STMN2|11075|stathmin-like 2##DQ895968|STMN2|11075|stathmin-like 2##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10	0.918824	CTCF.p2:-13:0.919
chr5	55278803	55278957	reg1020042.p1	8.259	+	NM_001242636 NM_001242639	-129731	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-131611	+	NM_001166534 AK093439 AX748127	-216155	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	11883	-	AK123389 NM_024669	250305	-	NM_005921	832019	+	NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##NM_001166534|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##AK093439|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0142	
chr8	130551528	130551634	reg1014186.p1	8.259	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1744798	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1803091	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1803256	+	AB042405 NM_031415	247552	-	BC003599 TSC_hg19_v1_chr8_-_130951934	400334	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	400425	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.016409	
chr12	87308602	87308755	reg1019192.p1	8.258	+	BC035851 NM_013244	-76021	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	-1040552	+	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	-1078441	-	AL833338 BC062424 AK093140 AX747948 NM_152589	1114482	-	TSC_hg19_v1_chr12_+_88429312 AK095477 NM_001009894 CR936776 AK311222 BC058014 BX640968 BX537868 BX648026 AK311153 BC035136 BC092422 AB590923 AM392924 AL137488	1120708	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	1227191	-	BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AL833338|C12orf50|160419|chromosome 12 open reading frame 50##BC062424|C12orf50|160419|chromosome 12 open reading frame 50##AK093140|C12orf50|160419|chromosome 12 open reading frame 50##NM_152589|C12orf50|160419|chromosome 12 open reading frame 50##AK095477|C12orf29|91298|chromosome 12 open reading frame 29##NM_001009894|C12orf29|91298|chromosome 12 open reading frame 29##CR936776|C12orf29|91298|chromosome 12 open reading frame 29##AK311222|C12orf29|91298|chromosome 12 open reading frame 29##BC058014|C12orf29|91298|chromosome 12 open reading frame 29##BX640968|C12orf29|91298|chromosome 12 open reading frame 29##BX537868|C12orf29|91298|chromosome 12 open reading frame 29##BX648026|C12orf29|91298|chromosome 12 open reading frame 29##AK311153|C12orf29|91298|chromosome 12 open reading frame 29##BC035136|C12orf29|91298|chromosome 12 open reading frame 29##BC092422|C12orf29|91298|chromosome 12 open reading frame 29##AM392924|C12orf29|91298|chromosome 12 open reading frame 29##AL137488|C12orf29|91298|chromosome 12 open reading frame 29##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa	0.116682	
chr16	50101557	50101690	reg1014953.p1	8.258	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	-1663	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	-1730	+	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	-42483	+	TSC_hg19_v1_chr16_+_50186838 AK300918 NM_001040284 NM_001040285	85212	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	198853	+	TSC_hg19_v1_chr16_+_50308041 BC039891	206430	+	AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##AK300918|PAPD5|64282|PAP associated domain containing 5##NM_001040284|PAPD5|64282|PAP associated domain containing 5##NM_001040285|PAPD5|64282|PAP associated domain containing 5##AK093706|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7	0.111201	
chr6	150275162	150275262	reg1016343.p2	8.258	+	AK299895 AB052906 NM_025217 TSC_hg19_v1_chr6_+_150263162 AX772820 BC034689 AY358665 AF304378 AY026825 CU689938	-12048	+	AY172580 BC096719 BC098152 AY172579 NM_001001788 AK310157	-31012	-	AY359075 NM_001243328	-58018	-	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	9950	+	BC131600 AB528849 AY039682 NM_130900	71421	-	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	115001	-	AK299895|ULBP2|80328|UL16 binding protein 2##AB052906|ULBP2|80328|UL16 binding protein 2##NM_025217|ULBP2|80328|UL16 binding protein 2##AX772820|ULBP2|80328|UL16 binding protein 2##BC034689|ULBP2|80328|UL16 binding protein 2##AY358665|ULBP2|80328|UL16 binding protein 2##AF304378|ULBP2|80328|UL16 binding protein 2##AY026825|ULBP2|80328|UL16 binding protein 2##AY172580|RAET1G|353091|retinoic acid early transcript 1G##BC096719|RAET1G|353091|retinoic acid early transcript 1G##BC098152|RAET1G|353091|retinoic acid early transcript 1G##AY172579|RAET1G|353091|retinoic acid early transcript 1G##NM_001001788|RAET1G|353091|retinoic acid early transcript 1G##AK310157|RAET1G|353091|retinoic acid early transcript 1G##AY359075|RAET1E|135250|retinoic acid early transcript 1E##NM_001243328|RAET1E|135250|retinoic acid early transcript 1E##AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L##AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3	0.017811	
chr14	19933791	19933898	reg1015173.p1	8.257	+	AY462874 AY465171 AY465172 NM_001005356 BC127623	-380470	+	BC136730 BC136731 NM_001013354	-556287	+	None	None	None	AY462874 AY465172 NM_001145442	86427	-	NM_001197287	248646	-	AB463966 NM_172194	281742	+	AY462874|POTEG|404785|POTE ankyrin domain family, member G##AY465171|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##NM_001005356|POTEG|404785|POTE ankyrin domain family, member G##BC127623|POTEG|404785|POTE ankyrin domain family, member G##BC136730|OR11H12|440153|olfactory receptor, family 11, subfamily H, member 12##BC136731|OR11H12|440153|olfactory receptor, family 11, subfamily H, member 12##NM_001013354|OR11H12|440153|olfactory receptor, family 11, subfamily H, member 12##AY462874|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##NM_001145442|POTEM|641455|POTE ankyrin domain family, member M##NM_001197287|OR11H2|79334|olfactory receptor, family 11, subfamily H, member 2##NM_172194|OR4Q3|441669|olfactory receptor, family 4, subfamily Q, member 3	0.760895	CTCF.p2:-9:0.761
chr4	80497703	80497818	reg1016611.p1	8.257	+	CU688758 DQ891321 DQ894505 BC058888 AK312768 BC029820 BC048274 X78712 NM_033214 AK292241 BC027598	-168393	-	BC063623 BC080651 BC004552 NM_032693	-250599	-	AK055774 BX648346 CU689134 AY424281 BC029604 TSC_hg19_v1_chr4_-_79860593 BC031256 BC047510 AK291232 NM_001040202 AX775925	-637278	-	AB527650 AY233452 TSC_hg19_v1_chr4_-_80993874 AY040326 BC114374 AB209913	496128	-	TSC_hg19_v1_chr4_-_80994237 AK091721 AX747144	496477	-	TSC_hg19_v1_chr4_-_80994394 NM_001145794 NM_058172 BC107876	496707	-	DQ891321|GK2|2712|glycerol kinase 2##DQ894505|GK2|2712|glycerol kinase 2##BC058888|GK2|2712|glycerol kinase 2##BC029820|GK2|2712|glycerol kinase 2##BC048274|GK2|2712|glycerol kinase 2##X78712|GK2|2712|glycerol kinase 2##NM_033214|GK2|2712|glycerol kinase 2##AK292241|GK2|2712|glycerol kinase 2##BC027598|GK2|2712|glycerol kinase 2##BC063623|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC080651|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC004552|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##NM_032693|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##AK055774|PAQR3|152559|progestin and adipoQ receptor family member III##BX648346|PAQR3|152559|progestin and adipoQ receptor family member III##AY424281|PAQR3|152559|progestin and adipoQ receptor family member III##BC029604|PAQR3|152559|progestin and adipoQ receptor family member III##BC031256|PAQR3|152559|progestin and adipoQ receptor family member III##BC047510|PAQR3|152559|progestin and adipoQ receptor family member III##AK291232|PAQR3|152559|progestin and adipoQ receptor family member III##NM_001040202|PAQR3|152559|progestin and adipoQ receptor family member III##AX775925|PAQR3|152559|progestin and adipoQ receptor family member III##AY233452|ANTXR2|118429|anthrax toxin receptor 2##AY040326|ANTXR2|118429|anthrax toxin receptor 2##BC114374|ANTXR2|118429|anthrax toxin receptor 2##AB209913|ANTXR2|118429|anthrax toxin receptor 2##NM_001145794|ANTXR2|118429|anthrax toxin receptor 2##NM_058172|ANTXR2|118429|anthrax toxin receptor 2##BC107876|ANTXR2|118429|anthrax toxin receptor 2	0.171258	
chr6	2738769	2738870	reg1016608.p1	8.257	+	NM_152554	-103522	-	TSC_hg19_v1_chr6_+_2245995 AK023629	-492806	+	CR541929 CR541947 DQ892789 DQ896036 AF042377 TSC_hg19_v1_chr6_-_2245809 AK130651 AK313953 BC000117 NM_001500	-493021	-	BX647582 NM_001012418 AK096893	12357	-	TSC_hg19_v1_chr6_+_2765561 AK315047	26761	+	TSC_hg19_v1_chr6_+_2765645 AB056152 NM_020135 NM_130395	26820	+	NM_152554|C6orf195|154386|chromosome 6 open reading frame 195##CR541929|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541947|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ892789|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ896036|GMDS|2762|GDP-mannose 4,6-dehydratase##AF042377|GMDS|2762|GDP-mannose 4,6-dehydratase##AK130651|GMDS|2762|GDP-mannose 4,6-dehydratase##AK313953|GMDS|2762|GDP-mannose 4,6-dehydratase##BC000117|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001500|GMDS|2762|GDP-mannose 4,6-dehydratase##BX647582|MYLK4|340156|myosin light chain kinase family, member 4##NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4##AK096893|MYLK4|340156|myosin light chain kinase family, member 4##AK315047|WRNIP1|56897|Werner helicase interacting protein 1##AB056152|WRNIP1|56897|Werner helicase interacting protein 1##NM_020135|WRNIP1|56897|Werner helicase interacting protein 1##NM_130395|WRNIP1|56897|Werner helicase interacting protein 1	0.190438	
chr7	115778401	115778518	reg1016628.p1	8.257	+	TSC_hg19_v1_chr7_-_115670864 CR933605 NM_001018058 NM_012252	-107607	-	TSC_hg19_v1_chr7_-_115670820 AK313546	-107641	-	TSC_hg19_v1_chr7_-_115670796 D43945 BC029891	-107673	-	NM_015641 AK299104 TSC_hg19_v1_chr7_+_115850592 BC001451 AK021575 AK300546 AK309324 AK222840 AF245356 AJ250865 AK315644 AB529039 EU176352 EU176694	72194	+	AK310995 NM_152829 AK291802 AF245357	84560	+	TSC_hg19_v1_chr7_+_116139705 AY353255 BC005256 NM_001206747 NM_001233 NM_198212 AK310786 AK311964 AF035752 AB451285 AB451417 AB489180 AM393815 BT007051 CR407685	361268	+	CR933605|TFEC|22797|transcription factor EC##NM_001018058|TFEC|22797|transcription factor EC##NM_012252|TFEC|22797|transcription factor EC##AK313546|TFEC|22797|transcription factor EC##D43945|TFEC|22797|transcription factor EC##BC029891|TFEC|22797|transcription factor EC##NM_015641|TES|26136|testis derived transcript (3 LIM domains)##AK299104|TES|26136|testis derived transcript (3 LIM domains)##BC001451|TES|26136|testis derived transcript (3 LIM domains)##AK021575|TES|26136|testis derived transcript (3 LIM domains)##AK300546|TES|26136|testis derived transcript (3 LIM domains)##AK309324|TES|26136|testis derived transcript (3 LIM domains)##AK222840|TES|26136|testis derived transcript (3 LIM domains)##AF245356|TES|26136|testis derived transcript (3 LIM domains)##AJ250865|TES|26136|testis derived transcript (3 LIM domains)##AK315644|TES|26136|testis derived transcript (3 LIM domains)##EU176352|TES|26136|testis derived transcript (3 LIM domains)##EU176694|TES|26136|testis derived transcript (3 LIM domains)##AK310995|TES|26136|testis derived transcript (3 LIM domains)##NM_152829|TES|26136|testis derived transcript (3 LIM domains)##AK291802|TES|26136|testis derived transcript (3 LIM domains)##AF245357|TES|26136|testis derived transcript (3 LIM domains)##AY353255|CAV2|858|caveolin 2##BC005256|CAV2|858|caveolin 2##NM_001206747|CAV2|858|caveolin 2##NM_001233|CAV2|858|caveolin 2##NM_198212|CAV2|858|caveolin 2##AK310786|CAV2|858|caveolin 2##AK311964|CAV2|858|caveolin 2##AF035752|CAV2|858|caveolin 2##AB451285|CAV2|858|caveolin 2##AB451417|CAV2|858|caveolin 2##AM393815|CAV2|858|caveolin 2##BT007051|CAV2|858|caveolin 2##CR407685|CAV2|858|caveolin 2	0.283452	CTCF.p2:-18:0.283
chr12	65500897	65501020	reg1015811.p2	8.256	+	AB527171 TSC_hg19_v1_chr12_+_65224283	-276710	+	TSC_hg19_v1_chr12_+_65218446 AK299508	-282514	+	NM_015279 TSC_hg19_v1_chr12_+_65218409 AK055404	-282575	+	DQ892394 DQ895609 TSC_hg19_v1_chr12_-_65514986	14032	-	BX647427 TSC_hg19_v1_chr12_-_65515016	14061	-	TSC_hg19_v1_chr12_-_65515107 AF122922 BC018037 AY358344	14127	-	AK299508|TBC1D30|23329|TBC1 domain family, member 30##NM_015279|TBC1D30|23329|TBC1 domain family, member 30##AK055404|TBC1D30|23329|TBC1 domain family, member 30##DQ892394|WIF1|11197|WNT inhibitory factor 1##DQ895609|WIF1|11197|WNT inhibitory factor 1##BX647427|WIF1|11197|WNT inhibitory factor 1##AF122922|WIF1|11197|WNT inhibitory factor 1##BC018037|WIF1|11197|WNT inhibitory factor 1##AY358344|WIF1|11197|WNT inhibitory factor 1	0.996368	CTCF.p2:-9:0.996
chr5	64779696	64779799	reg1016573.p1	8.256	+	AY692424 NM_197941 AY692422	-2023	-	BX647971 TSC_hg19_v1_chr5_+_64064766 NM_005869 AK225161 AK225105 AK308223 AK312954 AY358569 AF039692 BC012117	-714963	+	TSC_hg19_v1_chr5_-_64064491 AK094073 AX748442 NM_173829	-715243	-	TSC_hg19_v1_chr5_-_64858996 AF315941 BC005400 BC008504 NM_022145	79217	-	TSC_hg19_v1_chr5_+_64859122 AK025679 AK093675 AK300022 AK298175 AK301654 NM_015342 BC015385 AB384434 CU677289 GQ129262 GQ129263 D38552	79371	+	AB384982 CU692664 DQ893646 DQ895584 TSC_hg19_v1_chr5_-_64920148 AF230397 AF230398 AF230399 L04510 BC022510 AK292814	140377	-	AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##BX647971|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##NM_005869|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225161|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225105|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK308223|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK312954|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AY358569|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AF039692|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##BC012117|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK094073|SREK1IP1|285672|SREK1-interacting protein 1##NM_173829|SREK1IP1|285672|SREK1-interacting protein 1##AF315941|CENPK|64105|centromere protein K##BC005400|CENPK|64105|centromere protein K##BC008504|CENPK|64105|centromere protein K##NM_022145|CENPK|64105|centromere protein K##AK025679|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK300022|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK298175|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK301654|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##NM_015342|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##BC015385|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129262|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129263|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##D38552|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##DQ893646|TRIM23|373|tripartite motif containing 23##DQ895584|TRIM23|373|tripartite motif containing 23##AF230397|TRIM23|373|tripartite motif containing 23##AF230398|TRIM23|373|tripartite motif containing 23##AF230399|TRIM23|373|tripartite motif containing 23##L04510|TRIM23|373|tripartite motif containing 23##BC022510|TRIM23|373|tripartite motif containing 23##AK292814|TRIM23|373|tripartite motif containing 23	0.520168	CTCF.p2:18:0.520
chr10	8515293	8515438	reg1018620.p1	8.255	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-417882	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-418590	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-418716	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	2531892	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	2531920	+	AK299548 TSC_hg19_v1_chr10_+_11047339	2531975	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.634782	CTCF.p2:14:0.635
chr12	2994559	2994669	reg1015671.p2	8.255	+	TSC_hg19_v1_chr12_-_2986314 NM_001243088 NM_001243089 NM_021953 NM_202002 NM_202003	-8157	-	TSC_hg19_v1_chr12_+_2986385 NM_001252499 NM_001252500 AB073599 AK021945 AK299990 AK304613 AK315364 BC005106	-8225	+	TSC_hg19_v1_chr12_-_2986289 U83113 U74613 U74612 AK313845 BC006192 BC006529 AK291206	-8418	-	TSC_hg19_v1_chr12_+_3000056 AK024246 NM_001160408 NM_003324 AK293285 AK307434 AF045583 BC032587 CU689434 AB464323 EU446713	5439	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	73980	+	TSC_hg19_v1_chr12_+_3069109 BX640921	74447	+	NM_001243088|FOXM1|2305|forkhead box M1##NM_001243089|FOXM1|2305|forkhead box M1##NM_021953|FOXM1|2305|forkhead box M1##NM_202002|FOXM1|2305|forkhead box M1##NM_202003|FOXM1|2305|forkhead box M1##NM_001252499|C12orf32|83695|chromosome 12 open reading frame 32##NM_001252500|C12orf32|83695|chromosome 12 open reading frame 32##AB073599|C12orf32|83695|chromosome 12 open reading frame 32##AK021945|C12orf32|83695|chromosome 12 open reading frame 32##AK304613|C12orf32|83695|chromosome 12 open reading frame 32##AK315364|C12orf32|83695|chromosome 12 open reading frame 32##BC005106|C12orf32|83695|chromosome 12 open reading frame 32##U83113|FOXM1|2305|forkhead box M1##U74613|FOXM1|2305|forkhead box M1##U74612|FOXM1|2305|forkhead box M1##AK313845|FOXM1|2305|forkhead box M1##BC006192|FOXM1|2305|forkhead box M1##BC006529|FOXM1|2305|forkhead box M1##AK291206|FOXM1|2305|forkhead box M1##AK024246|TULP3|7289|tubby like protein 3##NM_001160408|TULP3|7289|tubby like protein 3##NM_003324|TULP3|7289|tubby like protein 3##AK293285|TULP3|7289|tubby like protein 3##AK307434|TULP3|7289|tubby like protein 3##AF045583|TULP3|7289|tubby like protein 3##BC032587|TULP3|7289|tubby like protein 3##EU446713|TULP3|7289|tubby like protein 3##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##BX640921|TEAD4|7004|TEA domain family member 4	0.147985	
chr12	93813321	93813456	reg1015316.p1	8.255	+	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	-41496	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-490290	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-490345	-	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	22298	-	TSC_hg19_v1_chr12_-_93835718 D83004	22330	-	TSC_hg19_v1_chr12_-_93835724 BC000396	22350	-	NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC000396|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.995649	CTCF.p2:3:0.996
chr5	136680563	136680671	reg1013084.p1	8.255	+	NM_001167576 NM_001167577 NM_020389	-979454	-	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-1212033	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-1212088	+	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	153624	-	TSC_hg19_v1_chr5_-_136834420 AK094489	153810	-	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	154363	-	NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.020777	
chr6	149364709	149364853	reg1017460.p1	8.255	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-296572	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-700590	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-700791	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	274322	+	AK315038 NM_015093 AK307650	274660	+	AY340238 NM_001002255 BC130305 HQ258040	356727	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.630415	CTCF.p2:-4:0.606
chr14	81316672	81316808	reg1016420.p1	8.254	+	AK292210 NM_000793	-619344	-	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	-638836	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	-1571036	+	NM_152446	89143	-	BC045834 AK309833 TSC_hg19_v1_chr14_-_81408073	91318	-	AK303378 BC024205 NM_000369 NM_001018036 NM_001142626 M31774 BC108653 BC009237 M73747 M32215 BC063613 AB209207 BC120972 BC120973 BC127628 BC127629 BC141970 S49816 AB384880 AY429111 CU687778 S45272	105126	+	AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##NM_152446|CEP128|145508|centrosomal protein 128kDa##BC045834|CEP128|145508|centrosomal protein 128kDa##AK309833|CEP128|145508|centrosomal protein 128kDa##BC024205|TSHR|7253|thyroid stimulating hormone receptor##NM_000369|TSHR|7253|thyroid stimulating hormone receptor##NM_001018036|TSHR|7253|thyroid stimulating hormone receptor##NM_001142626|TSHR|7253|thyroid stimulating hormone receptor##M31774|TSHR|7253|thyroid stimulating hormone receptor##BC108653|TSHR|7253|thyroid stimulating hormone receptor##BC009237|TSHR|7253|thyroid stimulating hormone receptor##M73747|TSHR|7253|thyroid stimulating hormone receptor##M32215|TSHR|7253|thyroid stimulating hormone receptor##BC063613|TSHR|7253|thyroid stimulating hormone receptor##AB209207|TSHR|7253|thyroid stimulating hormone receptor##BC120972|TSHR|7253|thyroid stimulating hormone receptor##BC120973|TSHR|7253|thyroid stimulating hormone receptor##BC127628|TSHR|7253|thyroid stimulating hormone receptor##BC127629|TSHR|7253|thyroid stimulating hormone receptor##BC141970|TSHR|7253|thyroid stimulating hormone receptor##S49816|TSHR|7253|thyroid stimulating hormone receptor##AY429111|TSHR|7253|thyroid stimulating hormone receptor##S45272|TSHR|7253|thyroid stimulating hormone receptor	0.0	
chr18	60786954	60787073	reg1015635.p1	8.254	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-402705	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-403087	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	-404349	+	TSC_hg19_v1_chr18_-_60795898 AF401211	8922	-	BC027258 NM_000633 NM_000657	199547	-	TSC_hg19_v1_chr18_-_60986977 X06487	199980	-	BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2	0.904787	CTCF.p2:6:0.905
chr7	19794284	19794394	reg1016526.p1	8.254	+	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	-45693	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	-609326	-	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	-637061	-	BX648384 NM_152774	18064	-	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	462641	-	AK295044 TSC_hg19_v1_chr7_+_20370337	575998	+	HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##AK295044|ITGB8|3696|integrin, beta 8	0.201452	CTCF.p2:-6:0.201
chr11	62146064	62146200	reg1017676.p1	8.253	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	-41184	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	-41307	+	HQ258026 AY236538 BC130639 BC130645 AY359052 NM_206998	-79623	-	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	40404	+	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	168104	-	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	168182	-	AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##HQ258026|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY236538|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130639|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130645|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY359052|SCGB1D4|404552|secretoglobin, family 1D, member 4##NM_206998|SCGB1D4|404552|secretoglobin, family 1D, member 4##AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein	0.242476	CTCF.p2:19:0.242
chr19	38586435	38586586	reg1014605.p1	8.253	+	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	-188598	+	TSC_hg19_v1_chr19_+_38397847 NM_015073	-188653	+	AK302913 AY026504 AK128826 NM_031951	-189236	-	AB463560 GQ358728 BC125152 BC125153 U43843 AK308563 NM_001135155 NM_004647	128325	-	BC021191 TSC_hg19_v1_chr19_-_38720320 NM_001135156	133806	-	TSC_hg19_v1_chr19_-_38720336 AK297581	133824	-	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##AK302913|WDR87|83889|WD repeat domain 87##AY026504|WDR87|83889|WD repeat domain 87##AK128826|WDR87|83889|WD repeat domain 87##NM_031951|WDR87|83889|WD repeat domain 87##GQ358728|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125152|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125153|DPF1|8193|D4, zinc and double PHD fingers family 1##U43843|DPF1|8193|D4, zinc and double PHD fingers family 1##AK308563|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135155|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_004647|DPF1|8193|D4, zinc and double PHD fingers family 1##BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1##AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1	0.999079	CTCF.p2:20:0.999
chr19	55185638	55185754	reg1015034.p1	8.253	+	TSC_hg19_v1_chr19_+_55174436 AF283988 EU915607 BC026309 AF025532 DQ892089 DQ895282 CU693206 CR542048 U82979	-11241	+	TSC_hg19_v1_chr19_+_55174417 AK292082 AK309227 AK314783	-11283	+	NM_001081438 NM_006847	-11573	+	BC136283 BC143802 NM_153443 AJ938052 AJ938053 AJ938054 AJ938055 AJ938056 AJ938057 AJ938058 AJ938059 AJ938060 AJ938061 AJ938062 AJ938063 AJ938064 AJ938065 AJ938066 AF022048	50280	+	L41268 NM_015868 BC050730 U24074 U73395 BC110613 BC032422 L76662 L76663 U50546 DQ890622 DQ893791 AY789057 FN395076 FN552550	64304	+	U24078 AY366240 NM_014218 AY366241 AF285431 AY789055 AY366237 L41267 AY366239 AY388471 BC069344 U24076 AF022045 CU686761 AY789056 AY366238 AJ417554 AJ417555 BC125147	95596	+	AF283988|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##EU915607|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##BC026309|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AF025532|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##DQ892089|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##DQ895282|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##CR542048|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##U82979|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK292082|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK309227|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK314783|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##NM_001081438|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##NM_006847|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##BC136283|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##BC143802|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##NM_153443|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938052|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938053|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938054|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938055|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938056|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938057|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938058|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938059|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938060|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938061|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938062|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938063|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938064|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938065|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AJ938066|KIR3DL3|115653|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3##AF022048|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##L41268|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##NM_015868|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##BC050730|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##U24074|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##U73395|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##BC110613|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##BC032422|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##L76662|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##L76663|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##U50546|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##DQ890622|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##DQ893791|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##AY789057|KIR2DL3|3804|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3##U24078|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY366240|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##NM_014218|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY366241|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AF285431|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY789055|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY366237|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##L41267|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY366239|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY388471|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##BC069344|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##U24076|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AF022045|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY789056|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AY366238|KIR2DL1|3802|killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1##AJ417554|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AJ417555|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##BC125147|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4	0.897079	CTCF.p2:-27:0.897
chr22	23009158	23009251	reg1013731.p1	8.253	+	NM_199127 X98922 CU686896 BC069534	-20406	+	BC014074 NM_206955 NM_206956 AK304593 TSC_hg19_v1_chr22_-_22901678 BC039731 U65011 NM_006115 NM_206953 NM_206954 BC022008	-107610	-	BC053901 AK093108 NM_080740	-134600	-	TSC_hg19_v1_chr22_+_23010757 L29162	1556	+	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	19999	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	31314	+	NM_199127|GGTLC2|91227|gamma-glutamyltransferase light chain 2##X98922|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC069534|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC014074|PRAME|23532|preferentially expressed antigen in melanoma##NM_206955|PRAME|23532|preferentially expressed antigen in melanoma##NM_206956|PRAME|23532|preferentially expressed antigen in melanoma##AK304593|PRAME|23532|preferentially expressed antigen in melanoma##BC039731|PRAME|23532|preferentially expressed antigen in melanoma##U65011|PRAME|23532|preferentially expressed antigen in melanoma##NM_006115|PRAME|23532|preferentially expressed antigen in melanoma##NM_206953|PRAME|23532|preferentially expressed antigen in melanoma##NM_206954|PRAME|23532|preferentially expressed antigen in melanoma##BC022008|PRAME|23532|preferentially expressed antigen in melanoma##BC053901|ZNF280A|129025|zinc finger protein 280A##AK093108|ZNF280A|129025|zinc finger protein 280A##NM_080740|ZNF280A|129025|zinc finger protein 280A##BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25##DQ896079|IGL@|3535|immunoglobulin lambda locus	0.980395	CTCF.p2:0:0.980
chr3	57204296	57204451	reg1018088.p1	8.253	+	AF494208 NM_017563 TSC_hg19_v1_chr3_-_57199413	-4963	-	AF458067 TSC_hg19_v1_chr3_-_57199347	-5040	-	AF433662 AK302493 NM_001128615	-91060	-	NM_003865	29906	-	TSC_hg19_v1_chr3_+_57261766 BC028599 NM_012096	57374	+	AK299008 TSC_hg19_v1_chr3_+_57261776	57403	+	AF494208|IL17RD|54756|interleukin 17 receptor D##NM_017563|IL17RD|54756|interleukin 17 receptor D##AF458067|IL17RD|54756|interleukin 17 receptor D##AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_003865|HESX1|8820|HESX homeobox 1##BC028599|APPL1|26060|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1##NM_012096|APPL1|26060|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1##AK299008|APPL1|26060|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	0.543806	CTCF.p2:-14:0.544
chrX	30160205	30160331	reg1016380.p2	8.252	+	AF181284 AJ243874 NM_014271	-1554649	+	AK128123 NM_001017930	-2160703	-	AK057527 NM_182506 BC101307 BC101309 BC101310	-2334153	+	NM_002364 AF015766 AK313347 BC026071 AK223081	73415	+	AK057441 NM_002365	88284	+	NM_002367 AK313769 BC032852 DQ891236 DQ894421 CR541779	99886	+	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##NM_002364|MAGEB2|4113|melanoma antigen family B, 2##AF015766|MAGEB2|4113|melanoma antigen family B, 2##AK313347|MAGEB2|4113|melanoma antigen family B, 2##BC026071|MAGEB2|4113|melanoma antigen family B, 2##AK223081|MAGEB2|4113|melanoma antigen family B, 2##AK057441|MAGEB3|4114|melanoma antigen family B, 3##NM_002365|MAGEB3|4114|melanoma antigen family B, 3##NM_002367|MAGEB4|4115|melanoma antigen family B, 4##AK313769|MAGEB4|4115|melanoma antigen family B, 4##BC032852|MAGEB4|4115|melanoma antigen family B, 4##DQ891236|MAGEB4|4115|melanoma antigen family B, 4##DQ894421|MAGEB4|4115|melanoma antigen family B, 4##CR541779|MAGEB4|4115|melanoma antigen family B, 4	0.286645	CTCF.p2:-12:0.287
chr10	18136748	18136869	reg1015446.p1	8.251	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	-38415	+	NM_001098844 BC157856	-95587	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	-285405	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	104021	+	NM_201593 NM_201596 NM_201597 S60415 BC136409 AF137376 AF423191 AY393860 AY675091 AK296471 AK311694 AK307526 NM_001167945 NM_201571 NM_201572 AK293837	292899	+	NM_000724 AB208917 U95019	412832	+	J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	0.842456	CTCF.p2:0:0.842
chr4	121077411	121077522	reg1014929.p1	8.251	+	EU831987 EU832080 AB528692 AF394735 TSC_hg19_v1_chr4_-_120987954 U65410 BC070283 AJ000186 BC005945 BC000356 U31278 AK223433 AK313827 AK298228 NM_002358	-89512	-	D89094 TSC_hg19_v1_chr4_-_120550167	-527304	-	AB527373 AM393036 AM393270 AM393448 AK290189 BC126233 AJ004865 AF155192 TSC_hg19_v1_chr4_-_120549960 AF043731 NM_001083	-527563	-	TSC_hg19_v1_chr4_-_121843992 AB464059 BC121037 BC121038 AK314293 AK310958 AF272897 AK056352 NM_018699 BC066942	766529	-	BC019351 AK289615 NM_024574 TSC_hg19_v1_chr4_-_121993690	916164	-	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	1008018	-	EU831987|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##EU832080|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF394735|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC070283|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AJ000186|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC005945|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC000356|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK223433|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK313827|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK298228|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##NM_002358|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC121037|PRDM5|11107|PR domain containing 5##BC121038|PRDM5|11107|PR domain containing 5##AK314293|PRDM5|11107|PR domain containing 5##AK310958|PRDM5|11107|PR domain containing 5##AF272897|PRDM5|11107|PR domain containing 5##AK056352|PRDM5|11107|PR domain containing 5##NM_018699|PRDM5|11107|PR domain containing 5##BC066942|PRDM5|11107|PR domain containing 5##BC019351|NDNF|79625|neuron-derived neurotrophic factor##AK289615|NDNF|79625|neuron-derived neurotrophic factor##NM_024574|NDNF|79625|neuron-derived neurotrophic factor##AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3	0.999825	CTCF.p2:4:1.000
chr4	143274404	143274538	reg1016525.p1	8.251	+	AK290619 NM_000585 NM_172175 BC018149 U14407	-716705	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-1132385	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-1132416	+	NM_001101669 NM_003866	493132	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	831593	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	831654	+	AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38	0.689729	CTCF.p2:-4:0.690
chr9	103363569	103363665	reg1015529.p2	8.251	+	NM_001018116 AK300099 TSC_hg19_v1_chr9_+_103340380 EU487253 BC090888	-23228	+	TSC_hg19_v1_chr9_+_103235637 BC035056 DQ891732 DQ894909	-127888	+	TSC_hg19_v1_chr9_+_103235495 NM_003692	-128113	+	NM_207299 AK303807 TSC_hg19_v1_chr9_+_103791087	427449	+	AK000307 AK225306 BC029380 NM_017753 TSC_hg19_v1_chr9_+_103947336	583709	+	NM_001127610 AK315347	782205	-	NM_001018116|MURC|347273|muscle-related coiled-coil protein##AK300099|MURC|347273|muscle-related coiled-coil protein##EU487253|MURC|347273|muscle-related coiled-coil protein##BC090888|MURC|347273|muscle-related coiled-coil protein##BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_207299|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK303807|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_001127610|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##AK315347|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)	0.996555	CTCF.p2:2:0.997
chr2	84968722	84968831	reg1015761.p1	8.250	+	TSC_hg19_v1_chr2_+_84743576 AK094676 NM_001370	-225199	+	NM_003849	-282191	-	AK296741 TSC_hg19_v1_chr2_-_84686396	-282381	-	TSC_hg19_v1_chr2_-_85108209 AK296608 AK309615	139431	-	TSC_hg19_v1_chr2_-_85108241 NM_001080824 BC051789	139527	-	NM_021103 AK130949 D28363 TSC_hg19_v1_chr2_+_85132779 AK311952 BC016731 BC107889 S54005 BC016025 M20259 AY453400	164019	+	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296608|C2orf89|129293|chromosome 2 open reading frame 89##AK309615|C2orf89|129293|chromosome 2 open reading frame 89##NM_001080824|C2orf89|129293|chromosome 2 open reading frame 89##BC051789|C2orf89|129293|chromosome 2 open reading frame 89##NM_021103|TMSB10|9168|thymosin beta 10##AK130949|TMSB10|9168|thymosin beta 10##AK311952|TMSB10|9168|thymosin beta 10##BC016731|TMSB10|9168|thymosin beta 10##BC107889|TMSB10|9168|thymosin beta 10##S54005|TMSB10|9168|thymosin beta 10##BC016025|TMSB10|9168|thymosin beta 10##M20259|TMSB10|9168|thymosin beta 10##AY453400|TMSB10|9168|thymosin beta 10	0.057586	
chr3	46118220	46118336	reg1016749.p1	8.250	+	AB189434 AB189435 NM_001024644 NM_005283	-49300	-	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	-80957	-	NM_006564 Y13248	-133306	+	BC064991 TSC_hg19_v1_chr3_-_46249804 L10918 BC051306 NM_001295	131531	-	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	165638	+	AK292685 NM_001123041 NM_001123396	276951	+	AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##BC064991|CCR1|1230|chemokine (C-C motif) receptor 1##L10918|CCR1|1230|chemokine (C-C motif) receptor 1##BC051306|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001295|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2	0.085537	
chr4	184328330	184328464	reg1015641.p1	8.250	+	NM_001185149	-84819	-	NM_001111319	-86471	-	TSC_hg19_v1_chr4_+_184020431 NM_024949	-307919	+	TSC_hg19_v1_chr4_+_184365788 AK000043 NM_017632	37389	+	TSC_hg19_v1_chr4_+_184365846 AF246705 AK096180 BC022270 AK225848 EU446516 CU692522	37472	+	TSC_hg19_v1_chr4_-_184425612 BC038563	97241	-	NM_001185149|CLDN24|100132463|claudin 24##NM_001111319|CLDN22|53842|claudin 22##NM_024949|WWC2|80014|WW and C2 domain containing 2##AK000043|CDKN2AIP|55602|CDKN2A interacting protein##NM_017632|CDKN2AIP|55602|CDKN2A interacting protein##AF246705|CDKN2AIP|55602|CDKN2A interacting protein##AK096180|CDKN2AIP|55602|CDKN2A interacting protein##BC022270|CDKN2AIP|55602|CDKN2A interacting protein##AK225848|CDKN2AIP|55602|CDKN2A interacting protein##EU446516|CDKN2AIP|55602|CDKN2A interacting protein##BC038563|LOC389247|389247|uncharacterized LOC389247	0.939873	CTCF.p2:15:0.940
chr6	43806120	43806230	reg1016475.p1	8.250	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-67305	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-67641	+	TSC_hg19_v1_chr6_+_43738284 AF022375	-67928	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	162199	+	CR627460 TSC_hg19_v1_chr6_+_44094741	288523	+	TSC_hg19_v1_chr6_-_44095161 AK312086	288985	-	M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##AF022375|VEGFA|7422|vascular endothelial growth factor A##BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14	0.462601	CTCF.p2:22:0.463
chr17	6746711	6746849	reg1017735.p1	8.249	+	AF357879 AK292818 AK304345 BC014599 NM_053285	-11747	-	NM_153230 BC034782	-67219	+	BC073156 TSC_hg19_v1_chr17_+_6659364 AK292710 AK292848 BC032776 BC058017 EF028165 EF028166 X99699	-87402	+	M62982 NM_000697 M35418 M58704 BC069557 AB590844	152627	+	NM_001004333	168955	+	AK289930 TSC_hg19_v1_chr17_+_6915955 BC036317 BC051802 BC062705 BC095436 AM746459	169180	+	AF357879|TEKT1|83659|tektin 1##AK292818|TEKT1|83659|tektin 1##AK304345|TEKT1|83659|tektin 1##BC014599|TEKT1|83659|tektin 1##NM_053285|TEKT1|83659|tektin 1##NM_153230|FBXO39|162517|F-box protein 39##BC034782|FBXO39|162517|F-box protein 39##BC073156|XAF1|54739|XIAP associated factor 1##AK292710|XAF1|54739|XIAP associated factor 1##AK292848|XAF1|54739|XIAP associated factor 1##BC032776|XAF1|54739|XIAP associated factor 1##BC058017|XAF1|54739|XIAP associated factor 1##EF028165|XAF1|54739|XIAP associated factor 1##EF028166|XAF1|54739|XIAP associated factor 1##X99699|XAF1|54739|XIAP associated factor 1##M62982|ALOX12|239|arachidonate 12-lipoxygenase##NM_000697|ALOX12|239|arachidonate 12-lipoxygenase##M35418|ALOX12|239|arachidonate 12-lipoxygenase##M58704|ALOX12|239|arachidonate 12-lipoxygenase##BC069557|ALOX12|239|arachidonate 12-lipoxygenase##NM_001004333|RNASEK|440400|ribonuclease, RNase K##AK289930|RNASEK|440400|ribonuclease, RNase K##BC036317|RNASEK|440400|ribonuclease, RNase K##BC051802|RNASEK|440400|ribonuclease, RNase K##BC062705|RNASEK|440400|ribonuclease, RNase K##BC095436|RNASEK|440400|ribonuclease, RNase K##AM746459|RNASEK|440400|ribonuclease, RNase K	0.996688	CTCF.p2:-18:0.997
chr19	7990185	7990296	reg1016244.p1	8.249	+	TSC_hg19_v1_chr19_+_7985899 BX647416	-4331	+	NM_003083 AK314878 U44755 AK222926 U44898 BC011868 CU680088 AB527480 EU446617 EU446902	-5019	+	NM_001195259	-9209	+	TSC_hg19_v1_chr19_-_7991004 BC062702 AK098834 NM_206833	776	-	AF026030 BC000679 AB590328 CU689670 BC033628 TSC_hg19_v1_chr19_-_8008548 DQ891301 DQ894486 AK223062 AK309415 AF041254	18312	-	TSC_hg19_v1_chr19_-_8008615 AK289634 NM_006351	18416	-	BX647416|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##NM_003083|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##AK314878|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##U44755|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##AK222926|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##U44898|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##BC011868|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##EU446617|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##EU446902|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##NM_001195259|LOC100507588|100507588|uncharacterized LOC100507588##BC062702|CTXN1|404217|cortexin 1##AK098834|CTXN1|404217|cortexin 1##NM_206833|CTXN1|404217|cortexin 1##AF026030|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##BC033628|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##DQ891301|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##DQ894486|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK223062|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK309415|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AF041254|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK289634|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##NM_006351|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)	0.908204	CTCF.p2:-22:0.892
chr6	155054442	155054590	reg1017105.p2	8.249	+	D28359 TSC_hg19_v1_chr6_+_154897429	-157086	+	TSC_hg19_v1_chr6_-_154831788 AK055911	-222714	-	TSC_hg19_v1_chr6_-_154831721 AY328891 AY328892 AY328893 NM_173515	-222781	-	BC070071 NM_014892 TSC_hg19_v1_chr6_+_155054540 AK302969	9	+	AK295651 AK303001 AK307815 TSC_hg19_v1_chr6_+_155054549 BC032728	38	+	TSC_hg19_v1_chr6_+_155054812 AB029039	309	+	AK055911|CNKSR3|154043|CNKSR family member 3##AY328891|CNKSR3|154043|CNKSR family member 3##AY328892|CNKSR3|154043|CNKSR family member 3##AY328893|CNKSR3|154043|CNKSR family member 3##NM_173515|CNKSR3|154043|CNKSR family member 3##BC070071|SCAF8|22828|SR-related CTD-associated factor 8##NM_014892|SCAF8|22828|SR-related CTD-associated factor 8##AK302969|SCAF8|22828|SR-related CTD-associated factor 8##AK295651|SCAF8|22828|SR-related CTD-associated factor 8##AK303001|SCAF8|22828|SR-related CTD-associated factor 8##AK307815|SCAF8|22828|SR-related CTD-associated factor 8##BC032728|SCAF8|22828|SR-related CTD-associated factor 8##AB029039|SCAF8|22828|SR-related CTD-associated factor 8	0.465897	CTCF.p2:-25:0.466
chr13	46085832	46085977	reg1019219.p1	8.248	+	TSC_hg19_v1_chr13_+_46039081 NM_031431 AF349676 AF332595 AK026305 AK225466 AK225952 BX648211 AK294959 AK304248 AK314387 BC038953 CU691622	-46807	+	TSC_hg19_v1_chr13_-_45992486 BC132739 BC136760 BC144401 AK094133 AK095465 AK302967 NM_001010875	-93410	-	TSC_hg19_v1_chr13_-_45992456 BC129808	-93444	-	BC131494 AK057244 NM_182542	103961	-	AK093129 AX747942 NM_152719	190541	+	AK096522 AB463764 BC041372 NM_198849	339896	-	NM_031431|COG3|83548|component of oligomeric golgi complex 3##AF349676|COG3|83548|component of oligomeric golgi complex 3##AF332595|COG3|83548|component of oligomeric golgi complex 3##AK026305|COG3|83548|component of oligomeric golgi complex 3##AK225466|COG3|83548|component of oligomeric golgi complex 3##AK225952|COG3|83548|component of oligomeric golgi complex 3##BX648211|COG3|83548|component of oligomeric golgi complex 3##AK294959|COG3|83548|component of oligomeric golgi complex 3##AK304248|COG3|83548|component of oligomeric golgi complex 3##AK314387|COG3|83548|component of oligomeric golgi complex 3##BC038953|COG3|83548|component of oligomeric golgi complex 3##BC132739|SLC25A30|253512|solute carrier family 25, member 30##BC136760|SLC25A30|253512|solute carrier family 25, member 30##BC144401|SLC25A30|253512|solute carrier family 25, member 30##AK094133|SLC25A30|253512|solute carrier family 25, member 30##AK095465|SLC25A30|253512|solute carrier family 25, member 30##AK302967|SLC25A30|253512|solute carrier family 25, member 30##NM_001010875|SLC25A30|253512|solute carrier family 25, member 30##BC129808|SLC25A30|253512|solute carrier family 25, member 30##BC131494|FAM194B|220081|family with sequence similarity 194, member B##AK057244|FAM194B|220081|family with sequence similarity 194, member B##NM_182542|FAM194B|220081|family with sequence similarity 194, member B##AK093129|SPERT|220082|spermatid associated##NM_152719|SPERT|220082|spermatid associated##BC041372|SIAH3|283514|seven in absentia homolog 3 (Drosophila)##NM_198849|SIAH3|283514|seven in absentia homolog 3 (Drosophila)	0.998427	CTCF.p2:-5:0.998
chr21	34312869	34312995	reg1013571.p2	8.248	+	BC069689 BC069709 BC069766 BC069779 AF231922 AK290983 DQ656042 NM_001162495 NM_001162496 NM_019596	-126935	-	AK096601 BC034794 TSC_hg19_v1_chr21_+_34144471 BC117397 BC117399	-168469	+	AY033903 AY033904 AY033905 AY033906 TSC_hg19_v1_chr21_-_34144044 AJ279080 AJ279081 AK309404 BC030539 BC084542 BC062992 NM_013329 NM_016631	-168858	-	TSC_hg19_v1_chr21_+_34398242 NM_005806 AK091462 BC047511 BC036245 BC034681 BC036275 AF221520	85319	+	TSC_hg19_v1_chr21_+_34442446 BC033290 NM_138983 AL834450 AB209791	129520	+	TSC_hg19_v1_chr21_+_34442554 AB463154 DQ896828 BC026989	129629	+	BC069689|C21orf62|56245|chromosome 21 open reading frame 62##BC069709|C21orf62|56245|chromosome 21 open reading frame 62##BC069766|C21orf62|56245|chromosome 21 open reading frame 62##BC069779|C21orf62|56245|chromosome 21 open reading frame 62##AF231922|C21orf62|56245|chromosome 21 open reading frame 62##AK290983|C21orf62|56245|chromosome 21 open reading frame 62##DQ656042|C21orf62|56245|chromosome 21 open reading frame 62##NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62##NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62##NM_019596|C21orf62|56245|chromosome 21 open reading frame 62##AK096601|C21orf49|54067|chromosome 21 open reading frame 49##BC034794|C21orf49|54067|chromosome 21 open reading frame 49##BC117397|C21orf49|54067|chromosome 21 open reading frame 49##BC117399|C21orf49|54067|chromosome 21 open reading frame 49##AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_005806|OLIG2|10215|oligodendrocyte lineage transcription factor 2##AK091462|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC047511|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC036245|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC034681|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC036275|OLIG2|10215|oligodendrocyte lineage transcription factor 2##AF221520|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC033290|OLIG1|116448|oligodendrocyte transcription factor 1##NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1##AL834450|OLIG1|116448|oligodendrocyte transcription factor 1##AB209791|OLIG1|116448|oligodendrocyte transcription factor 1##DQ896828|OLIG1|116448|oligodendrocyte transcription factor 1##BC026989|OLIG1|116448|oligodendrocyte transcription factor 1	0.98369	CTCF.p2:-2:0.984
chr9	137631108	137631198	reg1017297.p1	8.248	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	-97343	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	-97506	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-412753	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	141507	+	D83920 DQ891426 DQ894436 CR749452 BC020635 AK314867 NM_002003	178604	-	NM_014279 NM_006334 TSC_hg19_v1_chr9_+_137967133	335962	+	D90279|COL5A1|1289|collagen, type V, alpha 1##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D83920|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ891426|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ894436|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##CR749452|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##BC020635|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##AK314867|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_002003|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_014279|OLFM1|10439|olfactomedin 1##NM_006334|OLFM1|10439|olfactomedin 1	0.964258	CTCF.p2:8:0.922
chr19	4636361	4636513	reg1015291.p1	8.247	+	BC142617 TSC_hg19_v1_chr19_-_4559731 AK300037 NM_032108	-76696	-	AK127689 BC070198 TSC_hg19_v1_chr19_-_4540114	-96337	-	AF403428 NM_052972 BC034389 AB073607 AK027382 AK303861 AK314506 TSC_hg19_v1_chr19_-_4540049	-96393	-	NM_152362 TSC_hg19_v1_chr19_+_4639539 BC017672 AK097251	3101	+	NM_001167942	3591	+	BC003639 AL365373 AL365374 AF282264 AB590867 BC014655 AK098829 TSC_hg19_v1_chr19_-_4670355	33906	-	BC142617|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##AK300037|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##NM_032108|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##BC070198|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AF403428|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_052972|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##BC034389|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AB073607|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK027382|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK303861|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK314506|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_152362|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC017672|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##AK097251|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##NM_001167942|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC003639|C19orf10|56005|chromosome 19 open reading frame 10##AL365373|C19orf10|56005|chromosome 19 open reading frame 10##AL365374|C19orf10|56005|chromosome 19 open reading frame 10##AF282264|C19orf10|56005|chromosome 19 open reading frame 10##BC014655|C19orf10|56005|chromosome 19 open reading frame 10##AK098829|C19orf10|56005|chromosome 19 open reading frame 10	0.927261	CTCF.p2:-6:0.927
chr19	42250686	42250818	reg1017084.p1	8.245	+	M16234 TSC_hg19_v1_chr19_+_42221424	-29334	+	TSC_hg19_v1_chr19_+_42212619 CR749337 DQ890840 DQ896753 CU689928 M15042 X16455	-38116	+	TSC_hg19_v1_chr19_+_42212544 M29540 AK310844 BC034671 AK223101	-38201	+	NM_002483 TSC_hg19_v1_chr19_+_42259437 AK312542 M29541 M18728 M18216 BC005008 BT009774	8719	+	AK298694 NM_001815 D90277 D90278 L00692 L00693 BC106728	49800	+	AY358726 NM_173506	97755	-	M16234|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##CR749337|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ890840|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ896753|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M15042|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##X16455|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M29540|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK310844|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##BC034671|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK223101|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##NM_002483|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##AK312542|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M29541|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18728|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18216|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BC005008|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BT009774|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##NM_001815|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90277|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90278|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00692|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00693|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##BC106728|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##AY358726|LYPD4|147719|LY6/PLAUR domain containing 4##NM_173506|LYPD4|147719|LY6/PLAUR domain containing 4	0.97042	CTCF.p2:-17:0.970
chrX	15161568	15161689	reg1016176.p2	8.245	+	AK093075 AX747905 NM_001177475	-258216	+	NM_152581 TSC_hg19_v1_chrX_+_14891582 BC030641 AL832230 AK315781	-270072	+	TSC_hg19_v1_chrX_-_14891182 BC136558 BC136560 BC043596 BC055411 NM_001018113 NM_152633 AK091383 AX746948	-270453	-	BC001244 AK000643 BC013172 NM_001031739 NM_001168530 NM_024087	126604	-	AK292270 NM_001168531	126960	-	BX537853 NM_001012428	171052	-	AK093075|MOSPD2|158747|motile sperm domain containing 2##NM_001177475|MOSPD2|158747|motile sperm domain containing 2##NM_152581|MOSPD2|158747|motile sperm domain containing 2##BC030641|MOSPD2|158747|motile sperm domain containing 2##AL832230|MOSPD2|158747|motile sperm domain containing 2##AK315781|MOSPD2|158747|motile sperm domain containing 2##BC136558|FANCB|2187|Fanconi anemia, complementation group B##BC136560|FANCB|2187|Fanconi anemia, complementation group B##BC043596|FANCB|2187|Fanconi anemia, complementation group B##BC055411|FANCB|2187|Fanconi anemia, complementation group B##NM_001018113|FANCB|2187|Fanconi anemia, complementation group B##NM_152633|FANCB|2187|Fanconi anemia, complementation group B##AK091383|FANCB|2187|Fanconi anemia, complementation group B##BC001244|ASB9|140462|ankyrin repeat and SOCS box containing 9##AK000643|ASB9|140462|ankyrin repeat and SOCS box containing 9##BC013172|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_001031739|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_001168530|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_024087|ASB9|140462|ankyrin repeat and SOCS box containing 9##AK292270|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_001168531|ASB9|140462|ankyrin repeat and SOCS box containing 9##BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11##NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11	0.995883	CTCF.p2:4:0.996
chr1	3773856	3773967	reg1014959.p1	8.244	+	BC048797 NM_004402	-67	+	TSC_hg19_v1_chr1_-_3773776 BC001640 BC047450 BC026020 BC050721 NM_014704	-127	-	TSC_hg19_v1_chr1_-_3773757 AB011134 AK308191	-223	-	TSC_hg19_v1_chr1_-_3816816 CU688284 BC035643 BC047611	42852	-	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	42934	-	TSC_hg19_v1_chr1_+_4714668 AF175409	940818	+	BC048797|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)##NM_004402|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)##BC001640|CEP104|9731|centrosomal protein 104kDa##BC047450|CEP104|9731|centrosomal protein 104kDa##BC026020|CEP104|9731|centrosomal protein 104kDa##BC050721|CEP104|9731|centrosomal protein 104kDa##NM_014704|CEP104|9731|centrosomal protein 104kDa##AB011134|CEP104|9731|centrosomal protein 104kDa##AK308191|CEP104|9731|centrosomal protein 104kDa##BC035643|C1orf174|339448|chromosome 1 open reading frame 174##BC047611|C1orf174|339448|chromosome 1 open reading frame 174##BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##AF175409|AJAP1|55966|adherens junctions associated protein 1	0.477092	CTCF.p2:-7:0.477
chr4	46939644	46939785	reg1016088.p1	8.244	+	BC107855 BC035923 AX721204 NM_130902	-28477	-	AB209295 AK293466 S62907 TSC_hg19_v1_chr4_-_46391998 NM_000807	-547801	-	TSC_hg19_v1_chr4_-_46391484 AK307128	-548201	-	CU690038 DQ891679 DQ894864 EU176605 U30461 NM_001204266 NM_001204267 BC035055	55782	-	AK090780 NM_000809	56709	-	NM_000812 AK296023	93633	+	BC107855|COX7B2|170712|cytochrome c oxidase subunit VIIb2##BC035923|COX7B2|170712|cytochrome c oxidase subunit VIIb2##NM_130902|COX7B2|170712|cytochrome c oxidase subunit VIIb2##AB209295|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK293466|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##S62907|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_000807|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK307128|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##AK090780|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_000809|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_000812|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1##AK296023|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1	0.490522	CTCF.p2:-9:0.491
chr5	16160968	16161086	reg1016629.p1	8.244	+	TSC_hg19_v1_chr5_+_15500770 AF199356 AB463041	-660251	+	BC075061 TSC_hg19_v1_chr5_+_15500760	-660279	+	BC136424 TSC_hg19_v1_chr5_+_15500549	-660483	+	NM_001102562	18869	-	TSC_hg19_v1_chr5_-_16465884 BC010545 BC008752 NM_033414 AY046059	304849	-	NM_019000	348079	-	AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_001102562|MARCH11|441061|membrane-associated ring finger (C3HC4) 11##BC010545|ZNF622|90441|zinc finger protein 622##BC008752|ZNF622|90441|zinc finger protein 622##NM_033414|ZNF622|90441|zinc finger protein 622##AY046059|ZNF622|90441|zinc finger protein 622##NM_019000|FAM134B|54463|family with sequence similarity 134, member B	0.827806	CTCF.p2:0:0.828
chr7	6388709	6388815	reg1015561.p2	8.244	+	TSC_hg19_v1_chr7_-_6388581 AK311878 AF533707 BC006110 NM_001037163 BC142977	-252	-	AB528964 DQ891736 DQ894912 EU176610 AJ223957 TSC_hg19_v1_chr7_-_6312242 AJ005197 NM_004227 AK313728 BC028717	-76531	-	TSC_hg19_v1_chr7_+_6144605 AK022759 AY618868 BC060846 AK309375	-244164	+	TSC_hg19_v1_chr7_+_6414179 NM_006908 NM_018890 AK054993 BC107748 AK291806 AB209410 BC050687 AK291815 AY279384 BC004247 AB451238 AB451363 AB464133 AF136373 AF498964 AJ132694 BT007121 CU690768 EU831965 EU832058 EU832640 EU832717 M29870 M31467	25465	+	TSC_hg19_v1_chr7_-_6474593 AK298910	85828	-	TSC_hg19_v1_chr7_-_6487567 BC027603 AK074584 AK093958 AK122748 AK301087 AK301104 AX748382 AK298955	98777	-	AK311878|C7orf70|84792|chromosome 7 open reading frame 70##AF533707|C7orf70|84792|chromosome 7 open reading frame 70##BC006110|C7orf70|84792|chromosome 7 open reading frame 70##NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70##BC142977|C7orf70|84792|chromosome 7 open reading frame 70##DQ891736|CYTH3|9265|cytohesin 3##DQ894912|CYTH3|9265|cytohesin 3##EU176610|CYTH3|9265|cytohesin 3##AJ223957|CYTH3|9265|cytohesin 3##AJ005197|CYTH3|9265|cytohesin 3##NM_004227|CYTH3|9265|cytohesin 3##AK313728|CYTH3|9265|cytohesin 3##BC028717|CYTH3|9265|cytohesin 3##AK022759|USP42|84132|ubiquitin specific peptidase 42##AY618868|USP42|84132|ubiquitin specific peptidase 42##BC060846|USP42|84132|ubiquitin specific peptidase 42##AK309375|USP42|84132|ubiquitin specific peptidase 42##NM_006908|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##NM_018890|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK054993|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC107748|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291806|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB209410|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC050687|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291815|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AY279384|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC004247|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451238|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451363|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF136373|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF498964|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AJ132694|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BT007121|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU831965|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832058|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832640|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832717|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M29870|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M31467|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK298910|DAGLB|221955|diacylglycerol lipase, beta##BC027603|DAGLB|221955|diacylglycerol lipase, beta##AK074584|DAGLB|221955|diacylglycerol lipase, beta##AK093958|DAGLB|221955|diacylglycerol lipase, beta##AK122748|DAGLB|221955|diacylglycerol lipase, beta##AK301087|DAGLB|221955|diacylglycerol lipase, beta##AK301104|DAGLB|221955|diacylglycerol lipase, beta##AK298955|DAGLB|221955|diacylglycerol lipase, beta	0.993453	CTCF.p2:-13:0.993
chr8	123691219	123691331	reg1017924.p1	8.244	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-1037649	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1866769	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1867005	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	102636	+	BC042145 TSC_hg19_v1_chr8_+_123794000	102719	+	TSC_hg19_v1_chr8_+_123794108 AB020661	102828	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.24685	CTCF.p2:-2:0.225
chr15	48933725	48933854	reg1019358.p1	8.243	+	TSC_hg19_v1_chr15_+_48624363 AK291515 NM_001948 AK312122 U31930 U62891 L11877 AB049113 M89913 DQ891191 DQ894375 CR541720 CR541781	-309388	+	TSC_hg19_v1_chr15_+_48623625 NM_001025248 NM_001025249 AK000629 BC070339 BC110377 AK298464 U90223 AB528727	-310125	+	NM_000338 NM_001184832 AK129998 AK298312 BC020860	-435292	+	TSC_hg19_v1_chr15_-_48937070 L13923	3294	-	TSC_hg19_v1_chr15_-_48937907 BC146854 AK304737 BC094721 NM_000138 X63556	4140	-	BC117182 TSC_hg19_v1_chr15_-_49103277 AB020719 BC069186 AK303805 BX648822 BC107721 NM_001194998 NM_014985	169473	-	AK291515|DUT|1854|deoxyuridine triphosphatase##NM_001948|DUT|1854|deoxyuridine triphosphatase##AK312122|DUT|1854|deoxyuridine triphosphatase##U31930|DUT|1854|deoxyuridine triphosphatase##U62891|DUT|1854|deoxyuridine triphosphatase##L11877|DUT|1854|deoxyuridine triphosphatase##AB049113|DUT|1854|deoxyuridine triphosphatase##M89913|DUT|1854|deoxyuridine triphosphatase##DQ891191|DUT|1854|deoxyuridine triphosphatase##DQ894375|DUT|1854|deoxyuridine triphosphatase##CR541720|DUT|1854|deoxyuridine triphosphatase##CR541781|DUT|1854|deoxyuridine triphosphatase##NM_001025248|DUT|1854|deoxyuridine triphosphatase##NM_001025249|DUT|1854|deoxyuridine triphosphatase##AK000629|DUT|1854|deoxyuridine triphosphatase##BC070339|DUT|1854|deoxyuridine triphosphatase##BC110377|DUT|1854|deoxyuridine triphosphatase##AK298464|DUT|1854|deoxyuridine triphosphatase##U90223|DUT|1854|deoxyuridine triphosphatase##NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##L13923|FBN1|2200|fibrillin 1##BC146854|FBN1|2200|fibrillin 1##AK304737|FBN1|2200|fibrillin 1##BC094721|FBN1|2200|fibrillin 1##NM_000138|FBN1|2200|fibrillin 1##X63556|FBN1|2200|fibrillin 1##BC117182|CEP152|22995|centrosomal protein 152kDa##AB020719|CEP152|22995|centrosomal protein 152kDa##BC069186|CEP152|22995|centrosomal protein 152kDa##AK303805|CEP152|22995|centrosomal protein 152kDa##BX648822|CEP152|22995|centrosomal protein 152kDa##BC107721|CEP152|22995|centrosomal protein 152kDa##NM_001194998|CEP152|22995|centrosomal protein 152kDa##NM_014985|CEP152|22995|centrosomal protein 152kDa	0.953568	CTCF.p2:11:0.954
chr16	3181901	3182038	reg1018730.p1	8.243	+	TSC_hg19_v1_chr16_+_3162586 NM_001042428 NM_003456 AK313009 AF060865 BC002810	-19374	+	TSC_hg19_v1_chr16_-_3149286 AK074736	-32687	-	BC114452 AK027455 NM_032805	-39120	-	TSC_hg19_v1_chr16_-_3184862 AF098968	2902	-	AF017433 TSC_hg19_v1_chr16_+_3184980	2983	+	TSC_hg19_v1_chr16_+_3185058 NM_004220	3083	+	NM_001042428|ZNF205|7755|zinc finger protein 205##NM_003456|ZNF205|7755|zinc finger protein 205##AK313009|ZNF205|7755|zinc finger protein 205##AF060865|ZNF205|7755|zinc finger protein 205##BC002810|ZNF205|7755|zinc finger protein 205##AK074736|ZSCAN10|84891|zinc finger and SCAN domain containing 10##BC114452|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AK027455|ZSCAN10|84891|zinc finger and SCAN domain containing 10##NM_032805|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AF017433|ZNF213|7760|zinc finger protein 213##NM_004220|ZNF213|7760|zinc finger protein 213	0.984885	CTCF.p2:4:0.985
chr19	42205777	42205849	reg1019065.p1	8.243	+	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	-13661	-	D90276 AK298701 NM_001817	-72379	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	-123236	+	TSC_hg19_v1_chr19_+_42212531 NM_004363	6715	+	TSC_hg19_v1_chr19_+_42212544 M29540 AK310844 BC034671 AK223101	6738	+	TSC_hg19_v1_chr19_+_42212619 CR749337 DQ890840 DQ896753 CU689928 M15042 X16455	6823	+	AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_004363|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M29540|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK310844|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##BC034671|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK223101|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##CR749337|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ890840|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ896753|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M15042|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##X16455|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5	0.68447	CTCF.p2:-13:0.684
chr6	55310553	55310694	reg1019691.p1	8.243	+	AY358198 NM_207410	-118357	+	NM_001526 AK314279	-271529	+	AK055204 NM_001010872 BC101628 BC112275	-599035	+	CU692876 AL137605 AK293856 BC024194 AK055075 AK297191 AK294210 AK127587 NM_001042406 NM_019036	133309	-	TSC_hg19_v1_chr6_-_55740358 M60314 BC027958 NM_021073	429743	-	AK291559 TSC_hg19_v1_chr6_-_55740389	429766	-	AY358198|GFRAL|389400|GDNF family receptor alpha like##NM_207410|GFRAL|389400|GDNF family receptor alpha like##NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2##AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2##AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B##AL137605|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK293856|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##BC024194|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK055075|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK297191|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK294210|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK127587|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_001042406|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_019036|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##M60314|BMP5|653|bone morphogenetic protein 5##BC027958|BMP5|653|bone morphogenetic protein 5##NM_021073|BMP5|653|bone morphogenetic protein 5##AK291559|BMP5|653|bone morphogenetic protein 5	0.994872	CTCF.p2:-6:0.995
chr14	64604513	64604631	reg1017448.p1	8.241	+	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	-284877	+	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	-409823	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	-496010	-	NM_182913 AY061758 AK297874	76305	+	NM_182910	78099	+	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	145091	-	NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)	0.0	
chr15	81071404	81071536	reg1018117.p1	8.241	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	-83461	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	-83808	+	AK295763 TSC_hg19_v1_chr15_+_80733623	-337865	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	251	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	210730	-	TSC_hg19_v1_chr15_+_81293344 NM_022566	221874	+	AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199##D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##NM_022566|MESDC1|59274|mesoderm development candidate 1	0.571351	CTCF.p2:-18:0.571
chr8	22871984	22872090	reg1015982.p1	8.241	+	TSC_hg19_v1_chr8_+_22857415 AK292863 AY009093	-14600	+	AK314366 AK098744 TSC_hg19_v1_chr8_+_22857390	-14665	+	TSC_hg19_v1_chr8_+_22857067 AB018260 NM_015178	-14960	+	AB451272 AB451399 AF012628 AF018657 AF018658 AF020501 AF022386 CR541898 AB385139 TSC_hg19_v1_chr8_-_22926429	54382	-	TSC_hg19_v1_chr8_-_22926545 AF192548 AF016266 AF016268 AF153687 AK291216 AF012535 AF016849 AY358277 BX538104 AK298602 BC001281 NM_003842 NM_147187	54557	-	NM_003841 AK298664 BC017852 TSC_hg19_v1_chr8_+_22960433 AK313213 AK298718 AF012536 AY358281 AF016267 AF033854 AF014794 BC125041 BC125042 AF020502 AF012629 CR541857	88443	+	AK292863|RHOBTB2|23221|Rho-related BTB domain containing 2##AY009093|RHOBTB2|23221|Rho-related BTB domain containing 2##AK314366|RHOBTB2|23221|Rho-related BTB domain containing 2##AK098744|RHOBTB2|23221|Rho-related BTB domain containing 2##AB018260|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_015178|RHOBTB2|23221|Rho-related BTB domain containing 2##AB451272|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AB451399|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012628|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018657|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018658|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF020501|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF022386|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##CR541898|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF192548|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016266|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016268|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF153687|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK291216|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012535|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016849|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AY358277|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BX538104|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK298602|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BC001281|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003842|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_147187|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003841|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298664|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC017852|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK313213|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298718|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012536|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AY358281|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF016267|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF033854|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF014794|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125041|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125042|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF020502|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012629|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##CR541857|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain	0.636494	CTCF.p2:6:0.597
chr12	47791579	47791710	reg1018621.p1	8.240	+	TSC_hg19_v1_chr12_+_47610379 BC016154 AK307166	-181313	+	BC008360 NM_138371	-181593	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	-318061	-	TSC_hg19_v1_chr12_-_48099790 BC056415 AK025561 AK299465	308123	-	TSC_hg19_v1_chr12_-_48099814 BC003680	308170	-	TSC_hg19_v1_chr12_-_48099819 NM_001146075 NM_001146076 NM_024604	308187	-	BC016154|FAM113B|91523|family with sequence similarity 113, member B##BC008360|FAM113B|91523|family with sequence similarity 113, member B##NM_138371|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC056415|RPAP3|79657|RNA polymerase II associated protein 3##AK025561|RPAP3|79657|RNA polymerase II associated protein 3##AK299465|RPAP3|79657|RNA polymerase II associated protein 3##BC003680|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146075|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146076|RPAP3|79657|RNA polymerase II associated protein 3##NM_024604|RPAP3|79657|RNA polymerase II associated protein 3	0.263863	CTCF.p2:9:0.264
chr17	25936777	25936882	reg1015841.p2	8.240	+	BC035488 BC042106 NM_014238	-137800	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-315548	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-315707	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	21339	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	21374	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	21399	+	BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.987383	CTCF.p2:-7:0.987
chr17	57037508	57037626	reg1016035.p1	8.240	+	AB028995 AF260269 BC151228 NM_014906 TSC_hg19_v1_chr17_+_56833235 BC136290 BC143845 AF520614	-204273	+	TSC_hg19_v1_chr17_+_56833220 AK289966	-204350	+	TSC_hg19_v1_chr17_+_56769962 AF029669 AK290487 BC073161 NM_002876 NM_058216 BC064578 BC093930 BC101485 BC143259 BC000667 AF029670 AB528656 BT007339 AK129738 AK303363	-267566	+	TSC_hg19_v1_chr17_-_57184098 AF213365 AK289674 BX537955	146506	-	BC036012 TSC_hg19_v1_chr17_-_57184114	146547	-	TSC_hg19_v1_chr17_-_57184116 AK292459	146572	-	AB028995|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AF260269|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##BC151228|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##NM_014906|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##BC136290|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##BC143845|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AF520614|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AK289966|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF213365|TRIM37|4591|tripartite motif containing 37##AK289674|TRIM37|4591|tripartite motif containing 37##BX537955|TRIM37|4591|tripartite motif containing 37##BC036012|TRIM37|4591|tripartite motif containing 37##AK292459|TRIM37|4591|tripartite motif containing 37	0.120718	
chr1	160588668	160588812	reg1018289.p1	8.239	+	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	-39452	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	-39493	-	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	-95711	-	AK314244 NM_003037 BC012602	28323	-	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	92846	-	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	120324	+	AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7	0.827049	CTCF.p2:-6:0.827
chr20	43948297	43948426	reg1018966.p1	8.238	+	BC151219 AK074595 BC141811 AK074597 NM_003833 NM_030590 NM_030592	-11419	-	NM_014276 AB024964 AB026048 AB027710	-12835	+	AF114471 X04503 AB464192 DQ891365 DQ894545 AK312192 X04470 TSC_hg19_v1_chr20_-_43883206 AX772818 BC020708 NM_003064	-65166	-	CR542045 CR542074 DQ890718 DQ893898 AB464261 TSC_hg19_v1_chr20_-_43977065 X67016 AK222695 AK223243 AK303964 AK312507 BC030805 D13292 NM_002999	28694	-	NM_001197129	42215	+	NM_001099791 NM_033542 TSC_hg19_v1_chr20_+_43991822 AK075264 AK172738 AX775821 BC048286 BC023562 AL591714 AK309429	43456	+	BC151219|MATN4|8785|matrilin 4##AK074595|MATN4|8785|matrilin 4##BC141811|MATN4|8785|matrilin 4##AK074597|MATN4|8785|matrilin 4##NM_003833|MATN4|8785|matrilin 4##NM_030590|MATN4|8785|matrilin 4##NM_030592|MATN4|8785|matrilin 4##NM_014276|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB024964|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB026048|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB027710|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AF114471|SLPI|6590|secretory leukocyte peptidase inhibitor##X04503|SLPI|6590|secretory leukocyte peptidase inhibitor##DQ891365|SLPI|6590|secretory leukocyte peptidase inhibitor##DQ894545|SLPI|6590|secretory leukocyte peptidase inhibitor##AK312192|SLPI|6590|secretory leukocyte peptidase inhibitor##X04470|SLPI|6590|secretory leukocyte peptidase inhibitor##AX772818|SLPI|6590|secretory leukocyte peptidase inhibitor##BC020708|SLPI|6590|secretory leukocyte peptidase inhibitor##NM_003064|SLPI|6590|secretory leukocyte peptidase inhibitor##CR542045|SDC4|6385|syndecan 4##CR542074|SDC4|6385|syndecan 4##DQ890718|SDC4|6385|syndecan 4##DQ893898|SDC4|6385|syndecan 4##X67016|SDC4|6385|syndecan 4##AK222695|SDC4|6385|syndecan 4##AK223243|SDC4|6385|syndecan 4##AK303964|SDC4|6385|syndecan 4##AK312507|SDC4|6385|syndecan 4##BC030805|SDC4|6385|syndecan 4##D13292|SDC4|6385|syndecan 4##NM_002999|SDC4|6385|syndecan 4##NM_001197129|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_001099791|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_033542|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK075264|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK172738|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC048286|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC023562|SYS1-DBNDD2|767557|SYS1-DBNDD2 readthrough##AL591714|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK309429|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	0.964599	CTCF.p2:4:0.965
chr22	33670344	33670452	reg1013256.p1	8.238	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-216043	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-267672	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-472646	+	AJ007583 AB011181 NM_004737 NM_133642	645972	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1791751	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1983078	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.917151	CTCF.p2:-5:0.917
chr1	6535710	6535805	reg1014582.p2	8.237	+	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	-9555	-	TSC_hg19_v1_chr1_+_6484835 AL136880 NM_031475	-50926	+	AB463714 BC132698 BC136963 BC142687 TSC_hg19_v1_chr1_-_6479976 AK091122 NM_019089	-55827	-	TSC_hg19_v1_chr1_-_6545530 AK299523	9768	-	AB097001 NM_001042665 TSC_hg19_v1_chr1_-_6546016	10257	-	BC015231 NM_001042664	14877	-	U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AL136880|ESPN|83715|espin##NM_031475|ESPN|83715|espin##BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)##NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK299523|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##AB097001|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_001042665|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##BC015231|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_001042664|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	0.999706	CTCF.p2:-14:1.000
chr17	66756115	66756254	reg1016033.p2	8.237	+	AK056789 BC136686 BC136689 AY358197 NM_001243746 NM_017565 TSC_hg19_v1_chr17_-_66597112	-159161	-	AK298071 TSC_hg19_v1_chr17_-_66596742	-159445	-	TSC_hg19_v1_chr17_+_66508570 BC036285 S54705 AK124586 AK312307 CR749311 M18468 M33336	-247585	+	BC130280 BC143971 BC143972 AK304286 BC010392 AB020629 BC047765 BC094689 AK304360 AK295876 BC037309 BC024003 NM_007168	195272	-	BC062472 AK057068 AY028899 NM_080283	300906	-	BC125231 BC125232 AY028898 NM_080284 TSC_hg19_v1_chr17_-_67138037 BC070125 AK308431 BC029852	381891	-	AK056789|FAM20A|54757|family with sequence similarity 20, member A##BC136686|FAM20A|54757|family with sequence similarity 20, member A##BC136689|FAM20A|54757|family with sequence similarity 20, member A##AY358197|FAM20A|54757|family with sequence similarity 20, member A##NM_001243746|FAM20A|54757|family with sequence similarity 20, member A##NM_017565|FAM20A|54757|family with sequence similarity 20, member A##AK298071|FAM20A|54757|family with sequence similarity 20, member A##BC036285|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##S54705|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK124586|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK312307|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##CR749311|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M18468|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M33336|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	0.01505	
chr3	157336054	157336193	reg1016661.p1	8.237	+	NM_001099777 NM_001130001 NM_001130002 NM_001243729 BC126187 BC126189 BC144066 BC029129 BC010062	-74941	+	BC078142 BC057999 NM_001167915 NM_001167916	-114735	-	BC111017 AB051479 NM_001167911 NM_001167912	-114992	-	TSC_hg19_v1_chr3_-_157823531 AK309293	487416	-	HQ258019 AJ002367 TSC_hg19_v1_chr3_-_157823847 BC008829 NM_001163678 NM_003030 NM_006884	487760	-	TSC_hg19_v1_chr3_+_157827910 AK290334 BC006982 NM_016625 AF208853 BC010357	491768	+	NM_001099777|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130001|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130002|C3orf55|152078|chromosome 3 open reading frame 55##NM_001243729|C3orf55|152078|chromosome 3 open reading frame 55##BC126187|C3orf55|152078|chromosome 3 open reading frame 55##BC126189|C3orf55|152078|chromosome 3 open reading frame 55##BC144066|C3orf55|152078|chromosome 3 open reading frame 55##BC029129|C3orf55|152078|chromosome 3 open reading frame 55##BC010062|C3orf55|152078|chromosome 3 open reading frame 55##BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##HQ258019|SHOX2|6474|short stature homeobox 2##AJ002367|SHOX2|6474|short stature homeobox 2##BC008829|SHOX2|6474|short stature homeobox 2##NM_001163678|SHOX2|6474|short stature homeobox 2##NM_003030|SHOX2|6474|short stature homeobox 2##NM_006884|SHOX2|6474|short stature homeobox 2##AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1##NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1##AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1	0.795277	CTCF.p2:-10:0.795
chr7	139287019	139287126	reg1016251.p1	8.236	+	NM_001080511	-78399	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-118640	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-242058	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	190833	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	190967	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	242020	+	NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.0	
chr9	6739386	6739518	reg1015334.p1	8.236	+	AK310439 NM_001146696	-18590	+	BC111993 BC111995 M63635 D90239 M64590 AK314156 NM_000170	-93825	-	TSC_hg19_v1_chr9_+_6413338 AF274049 AB071698 EU176286 EU176602 AB385208	-326047	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	18215	+	TSC_hg19_v1_chr9_+_6757984 AB018323 AK304095 AK314355 AB037901 BC008296 AK303651 AK304032 BC104859 BC104861 BC143571	18587	+	AL137489 TSC_hg19_v1_chr9_-_7799779 BC009510 AK308643 AK128876 AK292632 NM_033428	1060263	-	AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##BC111993|GLDC|2731|glycine dehydrogenase (decarboxylating)##BC111995|GLDC|2731|glycine dehydrogenase (decarboxylating)##M63635|GLDC|2731|glycine dehydrogenase (decarboxylating)##D90239|GLDC|2731|glycine dehydrogenase (decarboxylating)##M64590|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK314156|GLDC|2731|glycine dehydrogenase (decarboxylating)##NM_000170|GLDC|2731|glycine dehydrogenase (decarboxylating)##AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C##AB018323|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304095|KDM4C|23081|lysine (K)-specific demethylase 4C##AK314355|KDM4C|23081|lysine (K)-specific demethylase 4C##AB037901|KDM4C|23081|lysine (K)-specific demethylase 4C##BC008296|KDM4C|23081|lysine (K)-specific demethylase 4C##AK303651|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304032|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104859|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104861|KDM4C|23081|lysine (K)-specific demethylase 4C##BC143571|KDM4C|23081|lysine (K)-specific demethylase 4C##AL137489|C9orf123|90871|chromosome 9 open reading frame 123##BC009510|C9orf123|90871|chromosome 9 open reading frame 123##AK292632|C9orf123|90871|chromosome 9 open reading frame 123##NM_033428|C9orf123|90871|chromosome 9 open reading frame 123	0.201603	CTCF.p2:-24:0.202
chr3	63179423	63179574	reg1019091.p1	8.235	+	AF458662 AB593079 TSC_hg19_v1_chr3_-_62861056 AB032947 NM_003716 NM_183393 NM_183394	-318454	-	TSC_hg19_v1_chr3_-_62860565 AB587314	-318866	-	AK290464 NM_018008	-820309	-	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	84419	+	NM_144642 AK315958 AK312465	249301	+	NM_001080537 AK126350	458860	+	AF458662|CADPS|8618|Ca++-dependent secretion activator##AB593079|CADPS|8618|Ca++-dependent secretion activator##AB032947|CADPS|8618|Ca++-dependent secretion activator##NM_003716|CADPS|8618|Ca++-dependent secretion activator##NM_183393|CADPS|8618|Ca++-dependent secretion activator##NM_183394|CADPS|8618|Ca++-dependent secretion activator##AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2##NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin##NM_144642|SYNPR|132204|synaptoporin##AK315958|SYNPR|132204|synaptoporin##AK312465|SYNPR|132204|synaptoporin##NM_001080537|SNTN|132203|sentan, cilia apical structure protein##AK126350|SNTN|132203|sentan, cilia apical structure protein	0.825778	CTCF.p2:29:0.826
chr8	79527614	79527755	reg1018848.p1	8.235	+	NM_006823 NM_181839 S76965	-99349	+	NM_001172086 NM_001172087	-1614405	-	BC000661 BC093043 TSC_hg19_v1_chr8_-_77912318 BC005375 M85038 AK312997 M86852 NM_000318 NM_001079867	-1615275	-	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	50636	+	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	189964	-	NM_001199214 NM_007029	995364	+	NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2##NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2##BC000661|PEX2|5828|peroxisomal biogenesis factor 2##BC093043|PEX2|5828|peroxisomal biogenesis factor 2##BC005375|PEX2|5828|peroxisomal biogenesis factor 2##M85038|PEX2|5828|peroxisomal biogenesis factor 2##AK312997|PEX2|5828|peroxisomal biogenesis factor 2##M86852|PEX2|5828|peroxisomal biogenesis factor 2##NM_000318|PEX2|5828|peroxisomal biogenesis factor 2##NM_001079867|PEX2|5828|peroxisomal biogenesis factor 2##NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7##NM_001199214|STMN2|11075|stathmin-like 2##NM_007029|STMN2|11075|stathmin-like 2	0.832324	CTCF.p2:-17:0.832
chr1	146250843	146250951	reg1017072.p1	8.234	+	BC136292 NM_183372 AL832622	-168199	-	AF419617 NM_001101663	-182653	-	NM_001097616	-367030	+	AJ224538 HQ257946 TSC_hg19_v1_chr1_-_146643798	392868	-	AK316005 AK292820 AK304069 AK310982 BC053610 NM_005399 AK294863 AK316183	393195	-	AK295985 TSC_hg19_v1_chr1_+_146649617	398683	+	BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##AF419617|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_001101663|NBPF24|728912|neuroblastoma breakpoint family, member 24##NM_001097616|GPR89C|728932|G protein-coupled receptor 89C##AJ224538|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##HQ257946|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316005|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK292820|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK304069|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK310982|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##BC053610|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##NM_005399|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK294863|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316183|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	0.968636	CTCF.p2:-10:0.969
chr3	75308084	75308229	reg1016152.p1	8.234	+	AB384611 BC150608 NM_020872	-737854	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1634118	-	BC051316 BC064501 NM_018029	-2197347	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	175993	-	AK000525 NM_001124759	405327	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	413330	+	BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074	0.989121	CTCF.p2:-2:0.989
chr6	123737135	123737259	reg1016924.p2	8.234	+	BC101377 BC101376 NM_001010852	-419617	+	TSC_hg19_v1_chr6_+_123317379 AK295158	-419814	+	TSC_hg19_v1_chr6_+_123110402 AK000184 BC018999 BC066591 AK301365 DQ892207 DQ895402 CU676352	-626780	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	220892	-	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	388007	+	AK093417 AX748113 BC026087 NM_152553	1567314	+	BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##AK295158|CLVS2|134829|clavesin 2##AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217	0.999891	CTCF.p2:-9:1.000
chr6	131840850	131840964	reg1014980.p2	8.234	+	NM_004842 NM_138633	-269609	+	NM_016377 TSC_hg19_v1_chr6_+_131456855 AK300587	-384060	+	TSC_hg19_v1_chr6_-_131384387 AK295124 NM_001135554 NM_001135555 NM_001199388 NM_001431	-456483	-	NM_000045 NM_001244438 AY074488 BC005321 TSC_hg19_v1_chr6_+_131894365 M14502 BC020653 CU676606 AB590280 DQ892039 DQ895230 BT006741	53475	+	AB385438 AF135022 AM393572 EU832308 EU832392 EU392526 EU392528 EU392529 EU392530 EU392531 AK315030 AF105332 EU392520 EU392522 EU392527 EU392532 BC060759 TSC_hg19_v1_chr6_-_131949372 AF104255 AL136776 AB033042 BC007088 NM_004830 NM_015979	108380	-	AK024899 AK296080 AK310691 AK315893 NM_005021 AK292903 EF560735 AF005632 AB587329 DQ234347	117575	+	NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_016377|AKAP7|9465|A kinase (PRKA) anchor protein 7##AK300587|AKAP7|9465|A kinase (PRKA) anchor protein 7##AK295124|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001135554|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001135555|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199388|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001431|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_000045|ARG1|383|arginase, liver##NM_001244438|ARG1|383|arginase, liver##AY074488|ARG1|383|arginase, liver##BC005321|ARG1|383|arginase, liver##M14502|ARG1|383|arginase, liver##BC020653|ARG1|383|arginase, liver##DQ892039|ARG1|383|arginase, liver##DQ895230|ARG1|383|arginase, liver##BT006741|ARG1|383|arginase, liver##AF135022|MED23|9439|mediator complex subunit 23##AM393572|MED23|9439|mediator complex subunit 23##EU832308|MED23|9439|mediator complex subunit 23##EU832392|MED23|9439|mediator complex subunit 23##EU392526|MED23|9439|mediator complex subunit 23##EU392528|MED23|9439|mediator complex subunit 23##EU392529|MED23|9439|mediator complex subunit 23##EU392530|MED23|9439|mediator complex subunit 23##EU392531|MED23|9439|mediator complex subunit 23##AK315030|MED23|9439|mediator complex subunit 23##AF105332|MED23|9439|mediator complex subunit 23##EU392520|MED23|9439|mediator complex subunit 23##EU392522|MED23|9439|mediator complex subunit 23##EU392527|MED23|9439|mediator complex subunit 23##EU392532|MED23|9439|mediator complex subunit 23##BC060759|MED23|9439|mediator complex subunit 23##AF104255|MED23|9439|mediator complex subunit 23##AL136776|MED23|9439|mediator complex subunit 23##AB033042|MED23|9439|mediator complex subunit 23##BC007088|MED23|9439|mediator complex subunit 23##NM_004830|MED23|9439|mediator complex subunit 23##NM_015979|MED23|9439|mediator complex subunit 23##AK024899|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK296080|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK310691|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK315893|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##NM_005021|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK292903|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##EF560735|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##DQ234347|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3	0.616782	CTCF.p2:0:0.617
chr19	3305057	3305168	reg1015163.p1	8.233	+	BC047522 DQ891648 DQ894837 TSC_hg19_v1_chr19_+_3224751 CU690430 AF329266	-80369	+	BC028101 NM_021938 AB209067 NM_001172673 TSC_hg19_v1_chr19_+_3224705	-80408	+	TSC_hg19_v1_chr19_+_3198814 BC008920	-106287	+	TSC_hg19_v1_chr19_+_3359531 NM_001245005 NM_205843 X12492 AK304816 AK289885	54344	+	TSC_hg19_v1_chr19_+_3366562 NM_001245002 NM_001245004 NM_005597 BC012120	61443	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	61468	+	BC047522|CELF5|60680|CUGBP, Elav-like family member 5##DQ891648|CELF5|60680|CUGBP, Elav-like family member 5##DQ894837|CELF5|60680|CUGBP, Elav-like family member 5##AF329266|CELF5|60680|CUGBP, Elav-like family member 5##BC028101|CELF5|60680|CUGBP, Elav-like family member 5##NM_021938|CELF5|60680|CUGBP, Elav-like family member 5##AB209067|CELF5|60680|CUGBP, Elav-like family member 5##NM_001172673|CELF5|60680|CUGBP, Elav-like family member 5##BC008920|NCLN|56926|nicalin##NM_001245005|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_205843|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X12492|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK304816|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK289885|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245002|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245004|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_005597|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC012120|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)	0.999858	CTCF.p2:-7:1.000
chr3	118753746	118753881	reg1018669.p1	8.233	+	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	-130	-	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	-280	-	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-2589440	-	AK097667 NM_152538 AK292387	111084	-	AK057421 NM_152539 BC130475 BC144197	111183	+	AK303924 AK313787 NM_006952 AB002155	138601	+	AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11##AK057421|C3orf30|152405|chromosome 3 open reading frame 30##NM_152539|C3orf30|152405|chromosome 3 open reading frame 30##BC130475|C3orf30|152405|chromosome 3 open reading frame 30##BC144197|C3orf30|152405|chromosome 3 open reading frame 30##AK303924|UPK1B|7348|uroplakin 1B##AK313787|UPK1B|7348|uroplakin 1B##NM_006952|UPK1B|7348|uroplakin 1B##AB002155|UPK1B|7348|uroplakin 1B	0.0	
chr11	23042971	23043108	reg1015273.p1	8.232	+	NM_001195637	-161068	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-191694	-	TSC_hg19_v1_chr11_+_22696382 CU680566 AB590780 CR450285	-346641	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	1475610	+	NM_031418 AK302659	3310691	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	3550701	-	NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##CR450285|GAS2|2620|growth arrest-specific 2##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated	0.62805	CTCF.p2:-6:0.628
chr1	31656947	31657056	reg1015020.p1	8.232	+	BX647437 TSC_hg19_v1_chr1_-_31538801	-118218	-	TSC_hg19_v1_chr1_-_31538565 GQ334687 GQ334688 NM_001020658 NM_014676 AK294477	-118409	-	TSC_hg19_v1_chr1_-_31538543 BC013398 D43951 AK291779 AK300457 AF315592 AK096476 AK222605	-118484	-	AK299507 TSC_hg19_v1_chr1_-_31712475	55439	-	NM_024522 TSC_hg19_v1_chr1_-_31712735	55734	-	DQ893627 DQ895442 TSC_hg19_v1_chr1_-_31769633 AK313800 AF090988 AK074516 EF011621 BC001494 NM_004814 AK298823	112629	-	BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)##NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)##NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)##AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)##BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)##D43951|PUM1|9698|pumilio homolog 1 (Drosophila)##AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)##AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)##AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)##AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)##AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)##AK299507|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1##NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1##DQ893627|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##DQ895442|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK313800|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AF090988|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK074516|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##EF011621|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##BC001494|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##NM_004814|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK298823|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)	0.919927	CTCF.p2:-4:0.920
chr6	122813186	122813307	reg1016310.p1	8.232	+	NM_181794 CR749456 AJ420562	-20175	+	CU688532 CU689596 AL137261 TSC_hg19_v1_chr6_-_122792947 AF164794 AB033079 BC014412 BC028607 BC033029 NM_020755 AK075339 AY358429 AK128781 AF087902	-20293	-	TSC_hg19_v1_chr6_+_122720796 AK225593 AK225594 BC112323 M65217 AK294624 BC005329 BC064622 BC121050 BC121051 BC128420 AK316377 AB463722 CU675115 EU446897	-92430	+	NM_032471 NM_181795	118130	+	BC093027 TSC_hg19_v1_chr6_+_122931549 BC036011 AF087873 AK315151	118334	+	NM_001446 TSC_hg19_v1_chr6_+_123100743 BC012299	287453	+	NM_181794|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AJ420562|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AL137261|SERINC1|57515|serine incorporator 1##AF164794|SERINC1|57515|serine incorporator 1##AB033079|SERINC1|57515|serine incorporator 1##BC014412|SERINC1|57515|serine incorporator 1##BC028607|SERINC1|57515|serine incorporator 1##BC033029|SERINC1|57515|serine incorporator 1##NM_020755|SERINC1|57515|serine incorporator 1##AK075339|SERINC1|57515|serine incorporator 1##AY358429|SERINC1|57515|serine incorporator 1##AF087902|SERINC1|57515|serine incorporator 1##AK225593|HSF2|3298|heat shock transcription factor 2##AK225594|HSF2|3298|heat shock transcription factor 2##BC112323|HSF2|3298|heat shock transcription factor 2##M65217|HSF2|3298|heat shock transcription factor 2##AK294624|HSF2|3298|heat shock transcription factor 2##BC005329|HSF2|3298|heat shock transcription factor 2##BC064622|HSF2|3298|heat shock transcription factor 2##BC121050|HSF2|3298|heat shock transcription factor 2##BC121051|HSF2|3298|heat shock transcription factor 2##BC128420|HSF2|3298|heat shock transcription factor 2##AK316377|HSF2|3298|heat shock transcription factor 2##EU446897|HSF2|3298|heat shock transcription factor 2##NM_032471|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_181795|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##BC093027|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##BC036011|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AF087873|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AK315151|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_001446|FABP7|2173|fatty acid binding protein 7, brain##BC012299|FABP7|2173|fatty acid binding protein 7, brain	0.42375	CTCF.p2:4:0.424
chr6	72243660	72243795	reg1016530.p1	8.232	+	AK023251 TSC_hg19_v1_chr6_-_72130545	-113227	-	TSC_hg19_v1_chr6_+_71998514 BC110999	-245203	+	TSC_hg19_v1_chr6_+_71998513 BC018688	-245217	+	AB045726 AB051866 TSC_hg19_v1_chr6_+_72596447	352701	+	BC151853 AB002338 BC152435 NM_014989 TSC_hg19_v1_chr6_+_72596658	352926	+	TSC_hg19_v1_chr6_+_72596702 AY190519	352985	+	AK023251|LINC00472|79940|long intergenic non-protein coding RNA 472##BC110999|OGFRL1|79627|opioid growth factor receptor-like 1##BC018688|OGFRL1|79627|opioid growth factor receptor-like 1##AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC151853|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB002338|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC152435|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_014989|RIMS1|22999|regulating synaptic membrane exocytosis 1##AY190519|RIMS1|22999|regulating synaptic membrane exocytosis 1	0.999251	CTCF.p2:10:0.999
chr11	68870342	68870435	reg1000068.p2	8.231	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-12862	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-53962	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-54038	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	191234	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	585468	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	585522	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.024655	
chr17	25896429	25896568	reg1016018.p2	8.231	+	BC035488 BC042106 NM_014238	-97469	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-275217	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-275376	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	61670	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	61705	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	61730	+	BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.978595	CTCF.p2:4:0.979
chr19	45842019	45842143	reg1015862.p2	8.231	+	NM_001824 TSC_hg19_v1_chr19_-_45826232	-15849	-	AK297900 AK129878 AK300730 AK313281 BC007462 TSC_hg19_v1_chr19_-_45826134 M14780	-15947	-	TSC_hg19_v1_chr19_-_45822843 BT006793 DQ890539 DQ893701	-19173	-	BC025318 NM_177417 BC062998 BC073841	1926	+	BC008346 TSC_hg19_v1_chr19_-_45873816 BC108255 AK303358 BC110522 BC110523	31657	-	TSC_hg19_v1_chr19_-_45873851 NM_000400 NM_001130867	31764	-	NM_001824|CKM|1158|creatine kinase, muscle##AK129878|CKM|1158|creatine kinase, muscle##AK300730|CKM|1158|creatine kinase, muscle##AK313281|CKM|1158|creatine kinase, muscle##BC007462|CKM|1158|creatine kinase, muscle##M14780|CKM|1158|creatine kinase, muscle##BT006793|CKM|1158|creatine kinase, muscle##DQ890539|CKM|1158|creatine kinase, muscle##DQ893701|CKM|1158|creatine kinase, muscle##BC025318|KLC3|147700|kinesin light chain 3##NM_177417|KLC3|147700|kinesin light chain 3##BC062998|KLC3|147700|kinesin light chain 3##BC073841|KLC3|147700|kinesin light chain 3##BC008346|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC108255|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##AK303358|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC110522|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC110523|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##NM_000400|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##NM_001130867|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2	0.998968	CTCF.p2:15:0.999
chr4	108981434	108981580	reg1018971.p1	8.231	+	TSC_hg19_v1_chr4_+_108911045 BC000306 AM392952 AM393255 DQ891419 DQ894593 AB528829 AF001902	-70434	+	AK314444 TSC_hg19_v1_chr4_+_108911011	-70495	+	AF001903 NM_001184705 NM_005327 TSC_hg19_v1_chr4_+_108910984 X96752	-70571	+	AK303272 NM_001166119	106407	-	TSC_hg19_v1_chr4_+_109088684 BC020624	107177	+	TSC_hg19_v1_chr4_-_109090113 AF288571 AK225772 NM_001130713 NM_001130714 NM_016269	108292	-	BC000306|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ891419|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ894593|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001902|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK314444|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001903|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_001184705|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_005327|HADH|3033|hydroxyacyl-CoA dehydrogenase##X96752|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK303272|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1##BC020624|LOC641518|641518|uncharacterized LOC641518##AF288571|LEF1|51176|lymphoid enhancer-binding factor 1##AK225772|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1##NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1	0.0	
chr10	31320544	31320713	reg1017826.p1	8.230	+	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	-32176	-	AF139543 BC066294 NM_183058	-401993	-	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-597507	+	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	193	-	TSC_hg19_v1_chr10_+_31607451 BX647794	286808	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	287329	-	AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)	0.414543	CTCF.p2:-22:0.415
chr20	6123180	6123314	reg1019206.p1	8.230	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-19084	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-19370	-	TSC_hg19_v1_chr20_-_6103678 AK314394 BC040545 AF443278	-19573	-	BC069214 NM_001200	625497	+	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	1797855	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	1877053	-	AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AK314394|FERMT1|55612|fermitin family member 1##BC040545|FERMT1|55612|fermitin family member 1##AF443278|FERMT1|55612|fermitin family member 1##BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4	0.898523	CTCF.p2:-7:0.899
chr8	29814482	29814628	reg1016943.p1	8.230	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-606485	-	AL137704 NM_057158	-608234	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-693941	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	125919	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	126017	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	138388	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chr1	157133567	157133686	reg1015162.p1	8.229	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-25343	-	TSC_hg19_v1_chr1_-_157108158 L16464	-25476	-	AK131392 NM_001004341	-64027	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	388604	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	434175	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	536901	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.99658	CTCF.p2:-7:0.997
chr13	27778167	27778277	reg1016216.p1	8.229	+	TSC_hg19_v1_chr13_-_27746003 BC026072 NM_182488	-32136	-	DQ894074 AF022789 TSC_hg19_v1_chr13_-_27745948 AK289685	-32361	-	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	-443369	-	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	47520	+	AY439004 NM_206827	66241	+	TSC_hg19_v1_chr13_+_27844966 HQ258126	66785	+	BC026072|USP12|219333|ubiquitin specific peptidase 12##NM_182488|USP12|219333|ubiquitin specific peptidase 12##DQ894074|USP12|219333|ubiquitin specific peptidase 12##AF022789|USP12|219333|ubiquitin specific peptidase 12##AK289685|USP12|219333|ubiquitin specific peptidase 12##AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21##AY439004|RASL11A|387496|RAS-like, family 11, member A##NM_206827|RASL11A|387496|RAS-like, family 11, member A##HQ258126|RASL11A|387496|RAS-like, family 11, member A	0.998796	CTCF.p2:7:0.999
chr17	77384686	77384799	reg1016292.p1	8.229	+	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-313712	+	AF329840 NM_198593 BC021553	-354220	+	TSC_hg19_v1_chr17_+_77020308 AK055541	-364432	+	NM_001082575	93820	-	AY230663 BC041453 NM_178543 AY358622	320147	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	367239	+	AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2	0.998489	CTCF.p2:4:0.998
chr4	147016388	147016523	reg1018168.p1	8.229	+	BC033879 TSC_hg19_v1_chr4_-_146859976	-156487	-	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	-156778	-	NM_001080531	-415100	+	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	80412	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	426541	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	543636	+	AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827##NM_001080531|C4orf51|646603|chromosome 4 open reading frame 51##NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2	0.957958	CTCF.p2:-8:0.958
chr3	179736542	179736651	reg1016886.p1	8.228	+	TSC_hg19_v1_chr3_+_179370901 NM_003940 U75362 BC016146 AK290338 AM393315 AM393392 AM393610 AM393780 DQ892472 DQ895684	-365701	+	TSC_hg19_v1_chr3_+_179322594 NM_001199957 NM_001199958 NM_002492 BX648034 BC005271 BC009796 AK313822 AF047181 BC093071 BC017909 CU679497	-414003	+	AY212270 BC032522 TSC_hg19_v1_chr3_-_179322427 BC021575 NM_020409 NM_177988	-414174	-	AB032593 NM_016559 AB032592 TSC_hg19_v1_chr3_-_179754937 AK299633 AK294501 AK314283 BC036183	18130	-	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	583407	+	AB075860 TSC_hg19_v1_chr3_+_180320970	584367	+	NM_003940|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##U75362|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##BC016146|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AK290338|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393315|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393392|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393610|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393780|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ892472|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ895684|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##NM_001199957|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_001199958|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AY212270|MRPL47|57129|mitochondrial ribosomal protein L47##BC032522|MRPL47|57129|mitochondrial ribosomal protein L47##BC021575|MRPL47|57129|mitochondrial ribosomal protein L47##NM_020409|MRPL47|57129|mitochondrial ribosomal protein L47##NM_177988|MRPL47|57129|mitochondrial ribosomal protein L47##AB032593|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_016559|PEX5L|51555|peroxisomal biogenesis factor 5-like##AB032592|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK299633|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK294501|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK314283|PEX5L|51555|peroxisomal biogenesis factor 5-like##BC036183|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##AB075860|TTC14|151613|tetratricopeptide repeat domain 14	0.0	
chr3	183622350	183622439	reg1015681.p1	8.228	+	TSC_hg19_v1_chr3_-_183602690 NM_001037639 NM_018622	-19686	-	TSC_hg19_v1_chr3_-_183602669 BC003653	-19716	-	TSC_hg19_v1_chr3_-_183602663 AK024765	-19732	-	TSC_hg19_v1_chr3_-_183735673 BC142670 BC142719 U83661 AF104942 AY754874 AY754875 AY754876 AB209454 BC051358 NM_001023587 NM_005688	113297	-	AY159812 NM_182537	126937	+	NM_001145143	127135	+	NM_001037639|PARL|55486|presenilin associated, rhomboid-like##NM_018622|PARL|55486|presenilin associated, rhomboid-like##BC003653|PARL|55486|presenilin associated, rhomboid-like##AK024765|PARL|55486|presenilin associated, rhomboid-like##BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY159812|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D##NM_182537|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D##NM_001145143|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D	0.993983	CTCF.p2:-6:0.994
chrX	69417217	69417339	reg1015603.p2	8.228	+	AK129500 NM_198512	-19943	+	TSC_hg19_v1_chrX_+_69353784 Y08915 AB528510 BT006736 CR456782 DQ892322 DQ895524	-63498	+	AK054596 BC004137 NM_001551 AK315660	-63939	+	NM_001013579 AB528120 AY947638	37246	+	BC096067 BC096068 BC096069 BC096070 BC095503 NM_002565	62306	-	BC012096 NM_004312 AF033105	70899	+	AK129500|DGAT2L6|347516|diacylglycerol O-acyltransferase 2-like 6##NM_198512|DGAT2L6|347516|diacylglycerol O-acyltransferase 2-like 6##Y08915|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##BT006736|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##CR456782|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##DQ892322|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##DQ895524|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##AK054596|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##BC004137|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##NM_001551|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##AK315660|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##NM_001013579|AWAT1|158833|acyl-CoA wax alcohol acyltransferase 1##AY947638|AWAT1|158833|acyl-CoA wax alcohol acyltransferase 1##BC096067|P2RY4|5030|pyrimidinergic receptor P2Y, G-protein coupled, 4##BC096068|P2RY4|5030|pyrimidinergic receptor P2Y, G-protein coupled, 4##BC096069|P2RY4|5030|pyrimidinergic receptor P2Y, G-protein coupled, 4##BC096070|P2RY4|5030|pyrimidinergic receptor P2Y, G-protein coupled, 4##BC095503|P2RY4|5030|pyrimidinergic receptor P2Y, G-protein coupled, 4##NM_002565|P2RY4|5030|pyrimidinergic receptor P2Y, G-protein coupled, 4##BC012096|ARR3|407|arrestin 3, retinal (X-arrestin)##NM_004312|ARR3|407|arrestin 3, retinal (X-arrestin)##AF033105|ARR3|407|arrestin 3, retinal (X-arrestin)	0.0	
chr12	67082743	67082903	reg1018824.p1	8.227	+	TSC_hg19_v1_chr12_-_67072881 AK095519 NM_001178074 NM_021150	-9921	-	BC115393 BC115394 TSC_hg19_v1_chr12_-_67072757 AK307576	-10067	-	TSC_hg19_v1_chr12_+_66696305 NM_033647 BC143409 BC143411 AK290894 AK024464 AB527324 AF319995	-386494	+	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	580279	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	580349	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	580607	+	AK095519|GRIP1|23426|glutamate receptor interacting protein 1##NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1##NM_021150|GRIP1|23426|glutamate receptor interacting protein 1##BC115393|GRIP1|23426|glutamate receptor interacting protein 1##BC115394|GRIP1|23426|glutamate receptor interacting protein 1##AK307576|GRIP1|23426|glutamate receptor interacting protein 1##NM_033647|HELB|92797|helicase (DNA) B##BC143409|HELB|92797|helicase (DNA) B##BC143411|HELB|92797|helicase (DNA) B##AK290894|HELB|92797|helicase (DNA) B##AF319995|HELB|92797|helicase (DNA) B##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1	0.88986	CTCF.p2:3:0.890
chr2	127117238	127117341	reg1015437.p1	8.226	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2334425	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-4604052	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-4622824	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	296418	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	296503	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	747452	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.151101	
chr3	52087669	52087778	reg1017694.p2	8.226	+	BC008926 NM_000992 TSC_hg19_v1_chr3_-_52029968	-57760	-	TSC_hg19_v1_chr3_-_52029912 BC070190 AK289538 AK311884 D28412	-57810	-	TSC_hg19_v1_chr3_-_52029890 BC071663 U49083 U10248 Z49148 BC071909 BC070481	-57842	-	X93921 TSC_hg19_v1_chr3_-_52090192 BC019107 AF508727 BC104880 BC104882 NM_001947	2552	-	TSC_hg19_v1_chr3_-_52188413 BC119692 AK075289 BC119693 AK315688	100707	-	BC110877 NM_001161580 NM_001161581 NM_015426	100982	-	BC008926|RPL29|6159|ribosomal protein L29##NM_000992|RPL29|6159|ribosomal protein L29##BC070190|RPL29|6159|ribosomal protein L29##AK289538|RPL29|6159|ribosomal protein L29##AK311884|RPL29|6159|ribosomal protein L29##D28412|RPL29|6159|ribosomal protein L29##BC071663|RPL29|6159|ribosomal protein L29##U49083|RPL29|6159|ribosomal protein L29##U10248|RPL29|6159|ribosomal protein L29##Z49148|RPL29|6159|ribosomal protein L29##BC071909|RPL29|6159|ribosomal protein L29##BC070481|RPL29|6159|ribosomal protein L29##X93921|DUSP7|1849|dual specificity phosphatase 7##BC019107|DUSP7|1849|dual specificity phosphatase 7##AF508727|DUSP7|1849|dual specificity phosphatase 7##BC104880|DUSP7|1849|dual specificity phosphatase 7##BC104882|DUSP7|1849|dual specificity phosphatase 7##NM_001947|DUSP7|1849|dual specificity phosphatase 7##BC119692|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK075289|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC119693|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK315688|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC110877|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161580|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161581|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_015426|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)	0.0	
chr9	66001606	66001707	reg1015959.p2	8.226	+	BC040528 NM_001113541 NM_015667	-492047	-	TSC_hg19_v1_chr9_+_45441926 BC006438	-20559730	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-22316813	+	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	455645	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	456840	-	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	492540	-	BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##AB593083|LOC100132249|100132249|uncharacterized LOC100132249	0.415484	CTCF.p2:-4:0.415
chr8	74577811	74577958	reg1014866.p2	8.225	+	TSC_hg19_v1_chr8_+_74207135 AF456765 BC067131 AY358270	-370615	+	TSC_hg19_v1_chr8_+_74206836 NM_172037	-371075	+	CR456773 L16558 AB529035 BC071671 BC071895 BC087837 BC071894 BC001476 BC006095 X57959 AB055763 AK225246 AK225254 AK291119 AK313365 X52967 BC009599 NM_000971	-372027	-	Y19062 TSC_hg19_v1_chr8_-_74659076 AB210014 AL079285 AK002152 AK126149 AK293496 AK303104 AK314617 BC008369 BC008370	81183	-	TSC_hg19_v1_chr8_-_74659103 AK294466 CR627442 NM_001164380 NM_001164381 NM_001164382 NM_001164383 NM_001164385 NM_014393	81274	-	TSC_hg19_v1_chr8_-_74659707 AK307841 AK293729	81812	-	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)##BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)##AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)##NM_172037|RDH10|157506|retinol dehydrogenase 10 (all-trans)##CR456773|RPL7|6129|ribosomal protein L7##L16558|RPL7|6129|ribosomal protein L7##BC071671|RPL7|6129|ribosomal protein L7##BC071895|RPL7|6129|ribosomal protein L7##BC087837|RPL7|6129|ribosomal protein L7##BC071894|RPL7|6129|ribosomal protein L7##BC006095|RPL7|6129|ribosomal protein L7##X57959|RPL7|6129|ribosomal protein L7##AK225246|RPL7|6129|ribosomal protein L7##AK225254|RPL7|6129|ribosomal protein L7##AK291119|RPL7|6129|ribosomal protein L7##AK313365|RPL7|6129|ribosomal protein L7##X52967|RPL7|6129|ribosomal protein L7##BC009599|RPL7|6129|ribosomal protein L7##NM_000971|RPL7|6129|ribosomal protein L7##Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK126149|LOC729696|729696|uncharacterized LOC729696##AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	0.963502	CTCF.p2:9:0.964
chr4	84692385	84692525	reg1018051.p1	8.224	+	TSC_hg19_v1_chr4_+_84457420 DQ345298 BC090956 AY358100 NM_032717 DQ324782	-234874	+	TSC_hg19_v1_chr4_+_84457260 AK055749 AK223543	-235183	+	BC016905 TSC_hg19_v1_chr4_-_84406254 EF531340 BC039573 AY358576 AK022704 AK023676 NM_139076	-286181	-	NM_006168	726931	-	NM_001263 U65887	811638	+	NM_014991	1195088	-	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK055749|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK223543|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC016905|FAM175A|84142|family with sequence similarity 175, member A##EF531340|FAM175A|84142|family with sequence similarity 175, member A##BC039573|FAM175A|84142|family with sequence similarity 175, member A##AY358576|FAM175A|84142|family with sequence similarity 175, member A##AK022704|FAM175A|84142|family with sequence similarity 175, member A##AK023676|FAM175A|84142|family with sequence similarity 175, member A##NM_139076|FAM175A|84142|family with sequence similarity 175, member A##NM_006168|NKX6-1|4825|NK6 homeobox 1##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3	0.360741	CTCF.p2:2:0.361
chr8	41685977	41686157	reg1007407.p1	8.223	+	AK026601 TSC_hg19_v1_chr8_+_41685847	-242	+	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	-30927	-	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	-163304	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	68243	-	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	223432	-	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	324466	+	M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic##AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit	0.981962	CTCF.p2:-23:0.909
chr9	136859487	136859616	reg1000028.p5	8.223	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	-2105	-	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-254565	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-256073	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	73642	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	74075	-	NM_017588 TSC_hg19_v1_chr9_+_137001212	141659	+	BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3##NM_017588|WDR5|11091|WD repeat domain 5	0.0	
chr15	67196142	67196259	reg1016794.p1	8.222	+	NM_001142861 U59914	-195271	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	-200641	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	-201526	+	TSC_hg19_v1_chr15_+_67358179 AK290881	161975	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	162201	+	NM_001145102 AK316017	221923	+	NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##AK290881|SMAD3|4088|SMAD family member 3##NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3	0.869416	CTCF.p2:11:0.851
chr16	58131233	58131387	reg1018826.p1	8.222	+	BC036495 BC055428 TSC_hg19_v1_chr16_+_58059491	-71828	+	NM_002428	-72029	+	TSC_hg19_v1_chr16_+_58035310 AK293220 AK298473 AK303121 BC010099 AK301494 BC004415 BC007774 BC006291 BC021554	-95978	+	TSC_hg19_v1_chr16_-_58163283 AK027099 AK297819 BC005152 AF087845 AF093680	31922	-	TSC_hg19_v1_chr16_-_58163286 NM_013242	32000	-	DQ893025 DQ896269 AB463465 BC008812 NM_001896	100401	-	BC036495|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##BC055428|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##NM_002428|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##AK293220|C16orf57|79650|chromosome 16 open reading frame 57##AK298473|C16orf57|79650|chromosome 16 open reading frame 57##AK303121|C16orf57|79650|chromosome 16 open reading frame 57##BC010099|C16orf57|79650|chromosome 16 open reading frame 57##AK301494|C16orf57|79650|chromosome 16 open reading frame 57##BC004415|C16orf57|79650|chromosome 16 open reading frame 57##BC007774|C16orf57|79650|chromosome 16 open reading frame 57##BC006291|C16orf57|79650|chromosome 16 open reading frame 57##BC021554|C16orf57|79650|chromosome 16 open reading frame 57##AK027099|C16orf80|29105|chromosome 16 open reading frame 80##AK297819|C16orf80|29105|chromosome 16 open reading frame 80##BC005152|C16orf80|29105|chromosome 16 open reading frame 80##AF087845|C16orf80|29105|chromosome 16 open reading frame 80##AF093680|C16orf80|29105|chromosome 16 open reading frame 80##NM_013242|C16orf80|29105|chromosome 16 open reading frame 80##DQ893025|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##DQ896269|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##BC008812|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##NM_001896|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide	0.0	
chrX	133530343	133530501	reg1019666.p1	8.222	+	TSC_hg19_v1_chrX_+_133507317 AY157622 NM_001015877 NM_032335 NM_032458 AL832725 AK290095 AK303369 BC005994 AB058726	-23045	+	NM_001101357	-159346	+	TSC_hg19_v1_chrX_-_133119645 L47125 AK300168 NM_001164617 NM_001164618 NM_001164619 NM_004484	-410771	-	TSC_hg19_v1_chrX_+_133594194 NM_000194 AK313435	63775	+	TSC_hg19_v1_chrX_+_133594225 M31642	63834	+	TSC_hg19_v1_chrX_+_133594303 BC000578 BT019350 CR407645 DQ895107 DQ895109 EU176316 EU176655 L29382 L29383	63897	+	AY157622|PHF6|84295|PHD finger protein 6##NM_001015877|PHF6|84295|PHD finger protein 6##NM_032335|PHF6|84295|PHD finger protein 6##NM_032458|PHF6|84295|PHD finger protein 6##AL832725|PHF6|84295|PHD finger protein 6##AK290095|PHF6|84295|PHD finger protein 6##AK303369|PHF6|84295|PHD finger protein 6##BC005994|PHF6|84295|PHD finger protein 6##AB058726|PHF6|84295|PHD finger protein 6##NM_001101357|CCDC160|347475|coiled-coil domain containing 160##L47125|GPC3|2719|glypican 3##AK300168|GPC3|2719|glypican 3##NM_001164617|GPC3|2719|glypican 3##NM_001164618|GPC3|2719|glypican 3##NM_001164619|GPC3|2719|glypican 3##NM_004484|GPC3|2719|glypican 3##NM_000194|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##AK313435|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##M31642|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##BC000578|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##BT019350|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##CR407645|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895107|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895109|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176316|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176655|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29382|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29383|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1	0.986949	CTCF.p2:0:0.987
chr19	42612909	42613089	reg1000072.p2	8.221	+	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	-32633	+	TSC_hg19_v1_chr19_+_42580286 NM_022752	-32717	+	S40369 AJ249209 BC131717 NM_002088	-43061	-	M36718 X13809 BT007438 AB590941 TSC_hg19_v1_chr19_-_42636564 BC006101 M36653 NM_001207025 NM_001207026 NM_001247994 NM_002698 X53468	23592	-	TSC_hg19_v1_chr19_-_42721830 BC027930 NM_133328 AY125488 BC013372 AK307895 AK130203 AK075328	108840	-	TSC_hg19_v1_chr19_+_42724463 AK298895 AB075831 NM_133444	111465	+	AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574##NM_022752|ZNF574|64763|zinc finger protein 574##S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##M36718|POU2F2|5452|POU class 2 homeobox 2##X13809|POU2F2|5452|POU class 2 homeobox 2##BT007438|POU2F2|5452|POU class 2 homeobox 2##BC006101|POU2F2|5452|POU class 2 homeobox 2##M36653|POU2F2|5452|POU class 2 homeobox 2##NM_001207025|POU2F2|5452|POU class 2 homeobox 2##NM_001207026|POU2F2|5452|POU class 2 homeobox 2##NM_001247994|POU2F2|5452|POU class 2 homeobox 2##NM_002698|POU2F2|5452|POU class 2 homeobox 2##X53468|POU2F2|5452|POU class 2 homeobox 2##BC027930|DEDD2|162989|death effector domain containing 2##NM_133328|DEDD2|162989|death effector domain containing 2##AY125488|DEDD2|162989|death effector domain containing 2##BC013372|DEDD2|162989|death effector domain containing 2##AK307895|DEDD2|162989|death effector domain containing 2##AK130203|DEDD2|162989|death effector domain containing 2##AK075328|DEDD2|162989|death effector domain containing 2##AK298895|ZNF526|116115|zinc finger protein 526##AB075831|ZNF526|116115|zinc finger protein 526##NM_133444|ZNF526|116115|zinc finger protein 526	0.0	
chr3	133649341	133649472	reg1017385.p1	8.221	+	AK025826 AK225383 BC051274 BC064502 BC082257 NM_025041	-820	-	TSC_hg19_v1_chr3_-_133614642 BC078662 AK312378 AF166492 BC002510 NM_016577	-34824	-	AK295451 AF498940 BT007263 AB385529 EU832725 TSC_hg19_v1_chr3_-_133614324	-35096	-	U70867 BC041140 AK303550 AK309561 TSC_hg19_v1_chr3_-_133748770	99344	-	BC051347 TSC_hg19_v1_chr3_-_133748836 NM_005630	99467	-	TSC_hg19_v1_chr3_-_133969397 AB527382	320058	-	AK025826|C3orf36|80111|chromosome 3 open reading frame 36##AK225383|C3orf36|80111|chromosome 3 open reading frame 36##BC051274|C3orf36|80111|chromosome 3 open reading frame 36##BC064502|C3orf36|80111|chromosome 3 open reading frame 36##BC082257|C3orf36|80111|chromosome 3 open reading frame 36##NM_025041|C3orf36|80111|chromosome 3 open reading frame 36##BC078662|RAB6B|51560|RAB6B, member RAS oncogene family##AK312378|RAB6B|51560|RAB6B, member RAS oncogene family##AF166492|RAB6B|51560|RAB6B, member RAS oncogene family##BC002510|RAB6B|51560|RAB6B, member RAS oncogene family##NM_016577|RAB6B|51560|RAB6B, member RAS oncogene family##AK295451|RAB6B|51560|RAB6B, member RAS oncogene family##AF498940|RAB6B|51560|RAB6B, member RAS oncogene family##BT007263|RAB6B|51560|RAB6B, member RAS oncogene family##EU832725|RAB6B|51560|RAB6B, member RAS oncogene family##U70867|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##BC041140|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK303550|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK309561|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##BC051347|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##NM_005630|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1	0.837084	CTCF.p2:-22:0.837
chr3	195753062	195753165	reg1014378.p1	8.221	+	TSC_hg19_v1_chr3_-_195717156 BC071730 AK300421 AK316025 AK299148	-35982	-	NM_005781 L13738	-117197	-	AK131539 NM_001010938	-130682	-	TSC_hg19_v1_chr3_-_195808954 AB209254 X01060 BC001188	55831	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	55848	-	TSC_hg19_v1_chr3_-_195808984 M11507	55870	-	BC071730|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AK316025|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK299148|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##NM_005781|TNK2|10188|tyrosine kinase, non-receptor, 2##L13738|TNK2|10188|tyrosine kinase, non-receptor, 2##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2##AB209254|TFRC|7037|transferrin receptor (p90, CD71)##X01060|TFRC|7037|transferrin receptor (p90, CD71)##BC001188|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)	0.624812	CTCF.p2:0:0.601
chr11	132952760	132952869	reg1012562.p1	8.219	+	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-139209	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-139800	-	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1171475	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	449500	-	AF521713 AK098717 NM_174927 BC058039	762567	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	874068	-	AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B	1.988238	CTCF.p2:-6:0.990
chr11	44115946	44116102	reg1016967.p2	8.219	+	NM_001127219 NM_032592 AK057649 BC020197 AY026508 AK304074 TSC_hg19_v1_chr11_+_44088043 AK307380	-28118	+	AB231734 NM_001031854 BC144554	-46477	+	TSC_hg19_v1_chr11_+_43964186 NM_001145033 BC052560	-152015	+	NM_001178083 NM_207122 U62740 TSC_hg19_v1_chr11_+_44117224 AK312375 BC010058 AK296713	1150	+	BC068545 TSC_hg19_v1_chr11_+_44117272 U72263 BC013050	1247	+	NM_000401 BX648142	1735	+	NM_001127219|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##NM_032592|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK057649|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##BC020197|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AY026508|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK304074|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK307380|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##NM_001145033|C11orf96|387763|chromosome 11 open reading frame 96##BC052560|C11orf96|387763|chromosome 11 open reading frame 96##NM_001178083|EXT2|2132|exostosin 2##NM_207122|EXT2|2132|exostosin 2##U62740|EXT2|2132|exostosin 2##AK312375|EXT2|2132|exostosin 2##BC010058|EXT2|2132|exostosin 2##AK296713|EXT2|2132|exostosin 2##BC068545|EXT2|2132|exostosin 2##U72263|EXT2|2132|exostosin 2##BC013050|EXT2|2132|exostosin 2##NM_000401|EXT2|2132|exostosin 2##BX648142|EXT2|2132|exostosin 2	0.999511	CTCF.p2:-20:1.000
chr3	193855745	193855840	reg1014274.p3	8.219	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	-1837	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	-1859	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-544627	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	216282	-	BC101064 BC101065 TSC_hg19_v1_chr3_-_194090471 AK125112 NM_001135057 NM_130830	234675	-	NM_004488	264202	-	AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2##BC101064|LRRC15|131578|leucine rich repeat containing 15##BC101065|LRRC15|131578|leucine rich repeat containing 15##AK125112|LRRC15|131578|leucine rich repeat containing 15##NM_001135057|LRRC15|131578|leucine rich repeat containing 15##NM_130830|LRRC15|131578|leucine rich repeat containing 15##NM_004488|GP5|2814|glycoprotein V (platelet)	0.916838	CTCF.p2:-22:0.820
chr15	66678956	66679099	reg1017136.p2	8.218	+	AK000523 TSC_hg19_v1_chr15_-_66649024 AK299233 BC000870 NM_017858	-30004	-	TSC_hg19_v1_chr15_+_66585931 NM_001143688 AK095407	-93128	+	NM_133375 AK295392 BC022089	-93382	+	TSC_hg19_v1_chr15_+_66679214 NM_002755	135	+	TSC_hg19_v1_chr15_+_66679272 AK291500 AK312356	246	+	TSC_hg19_v1_chr15_+_66694219 AK294322	15190	+	AK000523|TIPIN|54962|TIMELESS interacting protein##AK299233|TIPIN|54962|TIMELESS interacting protein##BC000870|TIPIN|54962|TIMELESS interacting protein##NM_017858|TIPIN|54962|TIMELESS interacting protein##NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##NM_002755|MAP2K1|5604|mitogen-activated protein kinase kinase 1##AK291500|MAP2K1|5604|mitogen-activated protein kinase kinase 1##AK312356|MAP2K1|5604|mitogen-activated protein kinase kinase 1##AK294322|MAP2K1|5604|mitogen-activated protein kinase kinase 1	0.014604	
chr3	14589908	14590009	reg1014684.p1	8.218	+	NM_001080423	-6371	-	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	-145842	+	TSC_hg19_v1_chr3_+_14444072 AK303649	-145889	+	TSC_hg19_v1_chr3_+_14693268 NM_016474 AK091158 AX746816 BC005199 BC033897 BC013999	103300	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	103325	+	NM_001184957 NM_001184958 NM_032137 AK131481 BC030599 AL834386 AL136781 BC038406	126687	+	NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2##NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_016474|C3orf19|51244|chromosome 3 open reading frame 19##AK091158|C3orf19|51244|chromosome 3 open reading frame 19##BC005199|C3orf19|51244|chromosome 3 open reading frame 19##BC033897|C3orf19|51244|chromosome 3 open reading frame 19##BC013999|C3orf19|51244|chromosome 3 open reading frame 19##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19##NM_001184957|C3orf20|84077|chromosome 3 open reading frame 20##NM_001184958|C3orf20|84077|chromosome 3 open reading frame 20##NM_032137|C3orf20|84077|chromosome 3 open reading frame 20##AK131481|C3orf20|84077|chromosome 3 open reading frame 20##BC030599|C3orf20|84077|chromosome 3 open reading frame 20##AL834386|C3orf20|84077|chromosome 3 open reading frame 20##AL136781|C3orf20|84077|chromosome 3 open reading frame 20##BC038406|C3orf20|84077|chromosome 3 open reading frame 20	0.609538	CTCF.p2:9:0.610
chr5	98162991	98163111	reg1017636.p1	8.218	+	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-58010	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-1644064	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-1644109	-	BC054860 BC117134 NM_001270 AF006513	99177	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	1708022	+	AF529367 TSC_hg19_v1_chr5_+_99871306	1708219	+	BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A	0.979273	CTCF.p2:11:0.979
chr8	111072691	111072816	reg1014973.p1	8.218	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-85787	-	NM_001099743 NM_001099744	-368734	-	AK290469 NM_001099745 NM_001099746	-379520	-	AB114605 NM_198124	3316628	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	3376376	-	TSC_hg19_v1_chr8_-_116680208 AK304046	5607467	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.023293	
chr10	25016952	25017058	reg1016284.p1	8.217	+	AF480466 NM_020824 TSC_hg19_v1_chr10_-_25012632	-4399	-	AK307604 TSC_hg19_v1_chr10_-_25012174	-4832	-	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	-261536	+	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	224527	-	CU693144 DQ892076 DQ895269 BC064597 AK095021 NM_145010 AY454125 AK292495 BC026165	287969	-	NM_024838 TSC_hg19_v1_chr10_+_25305540 AK125249 BC035132 BX647989	288545	+	AF480466|ARHGAP21|57584|Rho GTPase activating protein 21##NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21##BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##DQ892076|ENKUR|219670|enkurin, TRPC channel interacting protein##DQ895269|ENKUR|219670|enkurin, TRPC channel interacting protein##AK095021|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_145010|ENKUR|219670|enkurin, TRPC channel interacting protein##AY454125|ENKUR|219670|enkurin, TRPC channel interacting protein##AK292495|ENKUR|219670|enkurin, TRPC channel interacting protein##BC026165|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_024838|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AK125249|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BC035132|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BX647989|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)	0.880598	CTCF.p2:-22:0.881
chr10	76510921	76511102	reg1016536.p2	8.217	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-574424	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-574481	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-574529	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	75343	+	AY686755 NM_001003892 BC137321 BC137322	307294	-	AB027004 AB103375 NM_016364	348236	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr1	230108860	230108999	reg1018905.p1	8.217	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-346915	+	AK291013 TSC_hg19_v1_chr1_+_229761973 D50923 NM_014777 BC059381	-346955	+	NM_001025247 NM_014409 TSC_hg19_v1_chr1_-_229761804	-347131	-	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	94013	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	94067	+	BC150638 NM_024554	404461	-	BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##AK291013|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##D50923|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_014777|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC059381|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_001025247|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_014409|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5	1.010941	CTCF.p2:-10:0.990
chr17	53626649	53626775	reg1016772.p1	8.217	+	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	-127457	-	TSC_hg19_v1_chr17_+_53344967 AK295726 AK074289	-281726	+	AK290043 TSC_hg19_v1_chr17_+_53343204	-283525	+	BC010128 AK001832 NM_018286	173437	-	AK095175 NM_001099640	182750	-	NM_021213 TSC_hg19_v1_chr17_+_53828339 AF087857 AF151638	201663	+	CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##AK295726|HLF|3131|hepatic leukemia factor##AK074289|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100##NM_021213|PCTP|58488|phosphatidylcholine transfer protein##AF087857|PCTP|58488|phosphatidylcholine transfer protein##AF151638|PCTP|58488|phosphatidylcholine transfer protein	0.952279	CTCF.p2:-7:0.952
chr2	40065109	40065248	reg1019799.p1	8.217	+	TSC_hg19_v1_chr2_-_40006408 NM_025264	-58764	-	TSC_hg19_v1_chr2_-_40006399 CU678598 EU831465 EU831552 AK301353 AK298178 AK226034 BC004163 BC013299 AK307754 AL832115 AK093580 AX748213 AK292002	-58884	-	TSC_hg19_v1_chr2_+_39893056 NM_152390 AK075440 BC029530 AY358773 DQ890996	-172111	+	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	592253	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	614044	-	Y12878 Y12885 AK291696 BX537482 NM_001112802	674394	-	NM_025264|THUMPD2|80745|THUMP domain containing 2##EU831465|THUMPD2|80745|THUMP domain containing 2##EU831552|THUMPD2|80745|THUMP domain containing 2##AK301353|THUMPD2|80745|THUMP domain containing 2##AK298178|THUMPD2|80745|THUMP domain containing 2##AK226034|THUMPD2|80745|THUMP domain containing 2##BC004163|THUMPD2|80745|THUMP domain containing 2##BC013299|THUMPD2|80745|THUMP domain containing 2##AK307754|THUMPD2|80745|THUMP domain containing 2##AL832115|THUMPD2|80745|THUMP domain containing 2##AK093580|THUMPD2|80745|THUMP domain containing 2##AK292002|THUMPD2|80745|THUMP domain containing 2##NM_152390|TMEM178|130733|transmembrane protein 178##AK075440|TMEM178|130733|transmembrane protein 178##BC029530|TMEM178|130733|transmembrane protein 178##AY358773|TMEM178|130733|transmembrane protein 178##DQ890996|TMEM178|130733|transmembrane protein 178##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	0.941128	CTCF.p2:-3:0.941
chr3	50297514	50297635	reg1015527.p2	8.217	+	NM_001166425 AK302330	-13234	+	TSC_hg19_v1_chr3_+_50273754 AB463704 AF493906 AY677118 CR456783 CU677075 DQ892783 DQ895908 AK304473	-23790	+	TSC_hg19_v1_chr3_+_50273678 J03004	-23889	+	TSC_hg19_v1_chr3_+_50297644 BC033528 AK125074	162	+	AK308875 NM_001005914 NM_004636 TSC_hg19_v1_chr3_+_50305047	7445	+	AB209322 TSC_hg19_v1_chr3_+_50306434 U28369	8798	+	NM_001166425|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AK302330|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AF493906|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AY677118|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##CR456783|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##DQ892783|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##DQ895908|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AK304473|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##J03004|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AK308875|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##NM_001005914|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##NM_004636|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##AB209322|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##U28369|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B	0.99798	CTCF.p2:4:0.998
chr6	1382184	1382289	reg1015765.p2	8.217	+	BC053850 NM_033260	-69562	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-689146	-	AF508547 BC101697 BC101699 NM_148959	-725283	-	NM_001452 U13220 AB463646	7889	+	BC134421 NM_001453	228444	+	TSC_hg19_v1_chr6_+_1611545 BC169307	229338	+	BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##BC169307|FOXC1|2296|forkhead box C1	0.1124	
chr7	70240656	70240800	reg1016282.p1	8.217	+	TSC_hg19_v1_chr7_+_70231164 AK296981	-9523	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-1176140	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-1176399	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	357060	+	AK123862 TSC_hg19_v1_chr7_-_71801809	1561050	-	NM_001017440 TSC_hg19_v1_chr7_-_71802376	1561576	-	AK296981|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1##NM_001017440|CALN1|83698|calneuron 1	0.0	
chrX	38627474	38627607	reg1016348.p1	8.217	+	TSC_hg19_v1_chrX_+_38420794 NM_004615 AB062057 L10373 BC018036 AK293534 AK293178 AK293552 AK312343 D10653 CU676142 DQ892093 DQ895571 D29808 AB102665	-206788	+	BC107153 BC107154 NM_000531 BC114496 AK292757 K02100 BC074745	-415716	+	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	-440745	-	TSC_hg19_v1_chrX_+_38660678 NM_001098790 NM_001098791	33128	+	TSC_hg19_v1_chrX_+_38660711 BC019332	33166	+	BC008908 NM_021242	35532	+	NM_004615|TSPAN7|7102|tetraspanin 7##AB062057|TSPAN7|7102|tetraspanin 7##L10373|TSPAN7|7102|tetraspanin 7##BC018036|TSPAN7|7102|tetraspanin 7##AK293534|TSPAN7|7102|tetraspanin 7##AK293178|TSPAN7|7102|tetraspanin 7##AK293552|TSPAN7|7102|tetraspanin 7##AK312343|TSPAN7|7102|tetraspanin 7##D10653|TSPAN7|7102|tetraspanin 7##DQ892093|TSPAN7|7102|tetraspanin 7##DQ895571|TSPAN7|7102|tetraspanin 7##D29808|TSPAN7|7102|tetraspanin 7##AB102665|TSPAN7|7102|tetraspanin 7##BC107153|OTC|5009|ornithine carbamoyltransferase##BC107154|OTC|5009|ornithine carbamoyltransferase##NM_000531|OTC|5009|ornithine carbamoyltransferase##BC114496|OTC|5009|ornithine carbamoyltransferase##AK292757|OTC|5009|ornithine carbamoyltransferase##K02100|OTC|5009|ornithine carbamoyltransferase##BC074745|OTC|5009|ornithine carbamoyltransferase##DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001098790|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_001098791|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC019332|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))	0.429598	CTCF.p2:-23:0.430
chr2	96699866	96699992	reg1017318.p1	8.216	+	TSC_hg19_v1_chr2_+_96676311 BC015216	-23605	+	TSC_hg19_v1_chr2_-_96657677 AK302433	-42307	-	TSC_hg19_v1_chr2_-_96482383 BC117383 BC126153 AK057596	-217484	-	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	765	-	NM_000682 AB527942 BC133021 BC136537	82006	-	BC107126 AJ537600 BC107127 NM_001002036	104244	-	AK302433|ANKRD36C|400986|ankyrin repeat domain 36C##AK057596|LINC00342|150759|long intergenic non-protein coding RNA 342##BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)	0.0	
chr19	46094311	46094443	reg1017698.p1	8.215	+	TSC_hg19_v1_chr19_-_46088084 AK098798 NM_001017989 NM_025136	-6273	-	TSC_hg19_v1_chr19_-_46088075 AK025840	-6299	-	AB528200 AM392686 EU832556 TSC_hg19_v1_chr19_-_46088061 BC064146 BC005059 BC047316	-6335	-	AK290698 TSC_hg19_v1_chr19_-_46105429	11046	-	TSC_hg19_v1_chr19_-_46105467 BC038450 NM_005282 AK296429	11077	-	AL096717 TSC_hg19_v1_chr19_-_46142656 BC032630 AK026616 AK308403 AK304299 AK225043	48274	-	AK098798|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##NM_001017989|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##NM_025136|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##AK025840|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##AM392686|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##EU832556|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC064146|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC005059|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC047316|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##AK290698|GPR4|2828|G protein-coupled receptor 4##BC038450|GPR4|2828|G protein-coupled receptor 4##NM_005282|GPR4|2828|G protein-coupled receptor 4##AL096717|EML2|24139|echinoderm microtubule associated protein like 2##BC032630|EML2|24139|echinoderm microtubule associated protein like 2##AK026616|EML2|24139|echinoderm microtubule associated protein like 2##AK308403|EML2|24139|echinoderm microtubule associated protein like 2##AK304299|EML2|24139|echinoderm microtubule associated protein like 2##AK225043|EML2|24139|echinoderm microtubule associated protein like 2	0.0	
chr11	133033495	133033631	reg1017307.p1	8.214	+	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-219958	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-220549	-	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1252224	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	368751	-	AF521713 AK098717 NM_174927 BC058039	681818	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	793319	-	AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B	0.956727	CTCF.p2:-23:0.957
chr15	33378845	33378983	reg1013900.p1	8.213	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-18679	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-367748	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-368657	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	224255	+	TSC_hg19_v1_chr15_-_34212524 BC037796	833644	-	AK095198 NM_012125	882174	+	NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5	0.702057	CTCF.p2:-26:0.702
chr22	24372398	24372544	reg1018133.p1	8.213	+	BC146940 BC146943 NM_000854 AK312043 BC002415 BC146929 BC146936 BC071700 CR456374 CR456500 AB528145 CU013079 CU013097 CU013367 CU013385 DQ890742 CR456929 L38503	-50153	+	NM_001355 U49785	-50453	-	BT006970 CU012991 CU013279 DQ891571 DQ894765 U84143 AK298326 AK292044 CR456431 BC005971 AK296189 AK304122 AK315943 BC015508 NM_001084392	-55831	-	TSC_hg19_v1_chr22_+_24373110 NM_001144931	641	+	AF435971 BT019951 CU675529 X79389 DQ893480 DQ896757 CR456499 AJ867757 AJ867758 AJ874719 AL359937 TSC_hg19_v1_chr22_-_24384272 AK311138 BC007065 BC064833 NM_000853	11785	-	TSC_hg19_v1_chr22_+_24407753 AF072441 NM_001201429 NM_012295 AK307522 BC054497	35304	+	BC146940|GSTT2|2953|glutathione S-transferase theta 2##BC146943|GSTT2|2953|glutathione S-transferase theta 2##NM_000854|GSTT2|2953|glutathione S-transferase theta 2##AK312043|GSTT2|2953|glutathione S-transferase theta 2##BC002415|GSTT2|2953|glutathione S-transferase theta 2##BC146929|GSTT2|2953|glutathione S-transferase theta 2##BC146936|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##BC071700|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##CR456374|GSTT2|2953|glutathione S-transferase theta 2##CR456500|GSTT2|2953|glutathione S-transferase theta 2##CU013079|GSTT2|2953|glutathione S-transferase theta 2##CU013097|GSTT2|2953|glutathione S-transferase theta 2##CU013367|GSTT2|2953|glutathione S-transferase theta 2##CU013385|GSTT2|2953|glutathione S-transferase theta 2##DQ890742|GSTT2|2953|glutathione S-transferase theta 2##CR456929|GSTT2|2953|glutathione S-transferase theta 2##L38503|GSTT2|2953|glutathione S-transferase theta 2##NM_001355|DDT|1652|D-dopachrome tautomerase##U49785|DDT|1652|D-dopachrome tautomerase##BT006970|DDT|1652|D-dopachrome tautomerase##CU012991|DDT|1652|D-dopachrome tautomerase##CU013279|DDT|1652|D-dopachrome tautomerase##DQ891571|DDT|1652|D-dopachrome tautomerase##DQ894765|DDT|1652|D-dopachrome tautomerase##U84143|DDT|1652|D-dopachrome tautomerase##AK292044|DDT|1652|D-dopachrome tautomerase##CR456431|DDT|1652|D-dopachrome tautomerase##BC005971|DDT|1652|D-dopachrome tautomerase##BC015508|DDT|1652|D-dopachrome tautomerase##NM_001084392|DDT|1652|D-dopachrome tautomerase##NM_001144931|LOC391322|391322|D-dopachrome tautomerase-like##AF435971|GSTT1|2952|glutathione S-transferase theta 1##BT019951|GSTT1|2952|glutathione S-transferase theta 1##X79389|GSTT1|2952|glutathione S-transferase theta 1##DQ893480|GSTT1|2952|glutathione S-transferase theta 1##DQ896757|GSTT1|2952|glutathione S-transferase theta 1##CR456499|GSTT1|2952|glutathione S-transferase theta 1##AJ867757|GSTT1|2952|glutathione S-transferase theta 1##AJ867758|GSTT1|2952|glutathione S-transferase theta 1##AJ874719|GSTT1|2952|glutathione S-transferase theta 1##BC007065|GSTT1|2952|glutathione S-transferase theta 1##NM_000853|GSTT1|2952|glutathione S-transferase theta 1##AF072441|CABIN1|23523|calcineurin binding protein 1##NM_001201429|CABIN1|23523|calcineurin binding protein 1##NM_012295|CABIN1|23523|calcineurin binding protein 1##AK307522|CABIN1|23523|calcineurin binding protein 1##BC054497|CABIN1|23523|calcineurin binding protein 1	0.995569	CTCF.p2:-9:0.996
chr5	35183409	35183546	reg1016934.p1	8.213	+	NM_001204314 NM_001204315 NM_001204316 NM_001204317 NM_001204318	-65254	-	NM_031900	-135238	-	TSC_hg19_v1_chr5_+_34929697 AY177688 AY258422 BC065745 NM_001012339 NM_194283	-253785	+	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	47100	-	NM_000949	47345	-	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	434532	+	NM_001204314|PRLR|5618|prolactin receptor##NM_001204315|PRLR|5618|prolactin receptor##NM_001204316|PRLR|5618|prolactin receptor##NM_001204317|PRLR|5618|prolactin receptor##NM_001204318|PRLR|5618|prolactin receptor##NM_031900|AGXT2|64902|alanine--glyoxylate aminotransferase 2##AY177688|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##AY258422|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##BC065745|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_001012339|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_194283|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##NM_000949|PRLR|5618|prolactin receptor##BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2	0.051753	
chr10	73044917	73045041	reg1016499.p1	8.212	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-72599	+	NM_000281	-396439	-	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	-396677	-	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	34046	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	34067	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	111759	+	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_000281|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23	0.98142	CTCF.p2:26:0.981
chr18	25265902	25266052	reg1018525.p1	8.212	+	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-500744	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	-543098	-	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	-820261	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	491060	-	TSC_hg19_v1_chr18_-_25757363 NM_001792	491420	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	3356725	-	AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3	0.986585	CTCF.p2:1:0.987
chr20	49365959	49366048	reg1014668.p1	8.212	+	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	-17934	+	TSC_hg19_v1_chr20_-_49308074 AK124347	-57926	-	AK056792 NM_080829	-112578	-	AF361220 NM_001010974 NM_017843 NM_198799 TSC_hg19_v1_chr20_+_49411542 AK000502 BC038381 BC047337 AJ511266 BC056883	45515	+	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	181720	-	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	209060	-	BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##AF361220|BCAS4|55653|breast carcinoma amplified sequence 4##NM_001010974|BCAS4|55653|breast carcinoma amplified sequence 4##NM_017843|BCAS4|55653|breast carcinoma amplified sequence 4##NM_198799|BCAS4|55653|breast carcinoma amplified sequence 4##AK000502|BCAS4|55653|breast carcinoma amplified sequence 4##BC038381|BCAS4|55653|breast carcinoma amplified sequence 4##BC047337|BCAS4|55653|breast carcinoma amplified sequence 4##AJ511266|BCAS4|55653|breast carcinoma amplified sequence 4##BC056883|BCAS4|55653|breast carcinoma amplified sequence 4##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit	0.13436	
chr11	93904972	93905095	reg1017211.p1	8.211	+	TSC_hg19_v1_chr11_+_93862307 AY359023 FM201789	-42713	+	AK074897 TSC_hg19_v1_chr11_+_93862143 AF093239	-42882	+	TSC_hg19_v1_chr11_+_93862126 BC016931 NM_015368 AF398509 AK313074	-42938	+	NM_001199206	133769	+	TSC_hg19_v1_chr11_-_94134589 AK315161 NM_016540	229549	-	U37359 TSC_hg19_v1_chr11_-_94227011 BC017823 BC005241 AK095388 AF022778 AK308318 NM_005590 NM_005591	321940	-	AY359023|PANX1|24145|pannexin 1##FM201789|PANX1|24145|pannexin 1##AK074897|PANX1|24145|pannexin 1##AF093239|PANX1|24145|pannexin 1##BC016931|PANX1|24145|pannexin 1##NM_015368|PANX1|24145|pannexin 1##AF398509|PANX1|24145|pannexin 1##AK313074|PANX1|24145|pannexin 1##NM_001199206|FOLR4|390243|folate receptor 4 (delta) homolog (mouse)##AK315161|GPR83|10888|G protein-coupled receptor 83##NM_016540|GPR83|10888|G protein-coupled receptor 83##U37359|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC017823|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC005241|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK095388|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AF022778|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK308318|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005590|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005591|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)	0.989627	CTCF.p2:8:0.990
chr1	19766426	19766565	reg1017237.p2	8.211	+	NM_001040125 NM_001040126 NM_017765 TSC_hg19_v1_chr1_+_19638819 AK000327 AK130175 AK125580 AK130171 AK172745 BC015324	-127700	+	BC007352 BC012171 TSC_hg19_v1_chr1_-_19638614 BC010852 NM_003689	-127861	-	TSC_hg19_v1_chr1_-_19638598 Y16675 AF026947 AK225267	-127890	-	TSC_hg19_v1_chr1_-_19811972 AK313113 BC107752	45472	-	TSC_hg19_v1_chr1_-_19812006 AK125085	45511	-	NM_001206540 NM_004930 TSC_hg19_v1_chr1_-_19812073	45594	-	NM_001040125|PQLC2|54896|PQ loop repeat containing 2##NM_001040126|PQLC2|54896|PQ loop repeat containing 2##NM_017765|PQLC2|54896|PQ loop repeat containing 2##AK000327|PQLC2|54896|PQ loop repeat containing 2##AK130175|PQLC2|54896|PQ loop repeat containing 2##AK125580|PQLC2|54896|PQ loop repeat containing 2##AK130171|PQLC2|54896|PQ loop repeat containing 2##AK172745|PQLC2|54896|PQ loop repeat containing 2##BC015324|PQLC2|54896|PQ loop repeat containing 2##BC007352|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC012171|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC010852|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##NM_003689|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##Y16675|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AF026947|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AK225267|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AK313113|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##BC107752|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##AK125085|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_001206540|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_004930|CAPZB|832|capping protein (actin filament) muscle Z-line, beta	0.508942	CTCF.p2:14:0.509
chr13	36552789	36552931	reg1014774.p1	8.211	+	AK299059 AK311183 AK295777 TSC_hg19_v1_chr13_-_36429805 CR627093 AK308925 AK311434 AK311438 AK311195 NM_001195415 NM_001195416 NM_001195430	-122963	-	AK294737 NM_001204197 TSC_hg19_v1_chr13_+_36050945 AK315939	-501935	+	BC028170 AB593021 TSC_hg19_v1_chr13_-_36050827 AB593022 AK313185 AB073388 NM_005584	-502064	-	TSC_hg19_v1_chr13_-_36705434 AB002367 BC152456	152577	-	AK295102 TSC_hg19_v1_chr13_-_36705468	152613	-	NM_004734 TSC_hg19_v1_chr13_-_36705517	152656	-	AK299059|DCLK1|9201|doublecortin-like kinase 1##AK311183|DCLK1|9201|doublecortin-like kinase 1##AK295777|DCLK1|9201|doublecortin-like kinase 1##CR627093|DCLK1|9201|doublecortin-like kinase 1##AK308925|DCLK1|9201|doublecortin-like kinase 1##AK311434|DCLK1|9201|doublecortin-like kinase 1##AK311438|DCLK1|9201|doublecortin-like kinase 1##AK311195|DCLK1|9201|doublecortin-like kinase 1##NM_001195415|DCLK1|9201|doublecortin-like kinase 1##NM_001195416|DCLK1|9201|doublecortin-like kinase 1##NM_001195430|DCLK1|9201|doublecortin-like kinase 1##AK294737|NBEA|26960|neurobeachin##NM_001204197|NBEA|26960|neurobeachin##AK315939|NBEA|26960|neurobeachin##BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB002367|DCLK1|9201|doublecortin-like kinase 1##BC152456|DCLK1|9201|doublecortin-like kinase 1##AK295102|DCLK1|9201|doublecortin-like kinase 1##NM_004734|DCLK1|9201|doublecortin-like kinase 1	0.696927	CTCF.p2:-18:0.697
chr3	181418366	181418466	reg1015575.p1	8.211	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-1024	+	NM_001190233 TSC_hg19_v1_chr3_-_180707525 AK311765 BC073989 BC009702 AK309019 AK307097 NM_145261	-710983	-	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	-787938	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	11297	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	11722	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	1092871	+	BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##NM_001190233|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK311765|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC073989|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC009702|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK307097|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##NM_145261|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B	0.97026	CTCF.p2:10:0.970
chr14	23578569	23578675	reg1016570.p1	8.210	+	AF124726 NM_001164814 NM_001164815 NM_014977	-13800	-	TSC_hg19_v1_chr14_+_23564792 BC009645	-13835	+	TSC_hg19_v1_chr14_+_23564747 BC061637 AK000678	-13864	+	NM_001805	10197	-	TSC_hg19_v1_chr14_-_23623523 AK307609 AK300384 BX248288 NM_182728	44939	-	TSC_hg19_v1_chr14_-_23652818 AB037669	74200	-	AF124726|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164814|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164815|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_014977|ACIN1|22985|apoptotic chromatin condensation inducer 1##BC009645|C14orf119|55017|chromosome 14 open reading frame 119##BC061637|C14orf119|55017|chromosome 14 open reading frame 119##AK000678|C14orf119|55017|chromosome 14 open reading frame 119##NM_001805|CEBPE|1053|CCAAT/enhancer binding protein (C/EBP), epsilon##AK307609|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AK300384|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##BX248288|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##NM_182728|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AB037669|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8	0.041911	
chr16	11075696	11075835	reg1017314.p1	8.210	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-37322	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-39530	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-39599	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	274285	-	X63758 BC096135 BC096136 BC096137 NM_005425	287373	-	NM_021247	291686	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.849226	CTCF.p2:6:0.849
chr1	61508744	61508836	reg1016187.p1	8.210	+	BC027878 AK124828 NM_152377	-969357	-	BC032594 TSC_hg19_v1_chr1_-_60392478	-1116321	-	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	-1116405	-	AK092769 TSC_hg19_v1_chr1_+_61542908	34066	+	TSC_hg19_v1_chr1_+_61542928 AK299289 NM_001145511	34146	+	TSC_hg19_v1_chr1_+_61547427 AK299579 NM_001145512	38670	+	BC027878|C1orf87|127795|chromosome 1 open reading frame 87##AK124828|C1orf87|127795|chromosome 1 open reading frame 87##NM_152377|C1orf87|127795|chromosome 1 open reading frame 87##BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK299289|NFIA|4774|nuclear factor I/A##NM_001145511|NFIA|4774|nuclear factor I/A##AK299579|NFIA|4774|nuclear factor I/A##NM_001145512|NFIA|4774|nuclear factor I/A	0.995684	CTCF.p2:5:0.996
chr12	111142681	111142797	reg1017074.p1	8.209	+	AK293543 NM_001040107	-15140	-	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	-15781	-	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	-90814	+	L07395 AK297882 AB590512 EU831993 EU832086 TSC_hg19_v1_chr12_-_111180593	37807	-	TSC_hg19_v1_chr12_-_111180641 X74008 BC014073	37917	-	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	38017	-	AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##L07395|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK297882|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU831993|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU832086|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##X74008|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC014073|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme	0.405619	CTCF.p2:-5:0.406
chr20	2832875	2833004	reg1016709.p2	8.209	+	BC014247 AK026029 TSC_hg19_v1_chr20_-_2821811	-11139	-	TSC_hg19_v1_chr20_+_2821400 AK055787 NM_022575 NM_080413 AF308801	-11563	+	BC008864 TSC_hg19_v1_chr20_-_2821320 AK056353 NM_022760	-11642	-	BC126431 M34668 NM_002836 BC064406	11844	+	TSC_hg19_v1_chr20_+_2854126 NM_080840 AK294990 AK297293 BX571753 AB209702 AK290233 AK294499 BC027308 X54890	21306	+	NM_080841 X53364 TSC_hg19_v1_chr20_+_2903902	70942	+	BC014247|FAM113A|64773|family with sequence similarity 113, member A##AK026029|FAM113A|64773|family with sequence similarity 113, member A##AK055787|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##NM_022575|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##NM_080413|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##AF308801|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##BC008864|FAM113A|64773|family with sequence similarity 113, member A##AK056353|FAM113A|64773|family with sequence similarity 113, member A##NM_022760|FAM113A|64773|family with sequence similarity 113, member A##BC126431|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##M34668|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##NM_002836|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BC064406|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##NM_080840|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK294990|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK297293|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BX571753|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AB209702|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK290233|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK294499|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BC027308|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##X54890|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##NM_080841|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##X53364|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	0.969213	CTCF.p2:5:0.969
chr2	237089624	237089753	reg1016998.p1	8.209	+	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-13056	-	AK311262 TSC_hg19_v1_chr2_-_237076045	-13674	-	TSC_hg19_v1_chr2_+_236403297 AB384114 AF413078	-686378	+	NM_212556 BX647589	83306	-	BC043504 NM_024726 AK294105 BC028699	326444	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	388740	+	AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##AF413078|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7	0.995575	CTCF.p2:15:0.996
chr4	183846555	183846659	reg1011423.p1	8.209	+	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	-7973	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	-8077	-	NM_001080477 HE578284 HE578285	-601453	+	TSC_hg19_v1_chr4_+_184020431 NM_024949	173871	+	NM_001111319	395319	-	NM_001185149	396971	-	NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_024949|WWC2|80014|WW and C2 domain containing 2##NM_001111319|CLDN22|53842|claudin 22##NM_001185149|CLDN24|100132463|claudin 24	0.534593	CTCF.p2:66:0.535
chr10	101152350	101152459	reg1015032.p2	8.208	+	TSC_hg19_v1_chr10_+_101089114 AK308618	-63278	+	TSC_hg19_v1_chr10_+_101088794 NM_020348	-63580	+	AJ299720 AK094037 BC112356 AF282885 AF282886 AF282887 AJ299719 AK314759 NM_001166244 NM_001166245 NM_001166246 NM_021828	-156810	-	AK301916 AB587385 AY513279 M37400 AF052153 BC000498 AK312684 TSC_hg19_v1_chr10_-_101190382 AK293483 AK309174 NM_002079	37962	-	NM_145285 BC025788 AK313485 AK300856	140309	+	TSC_hg19_v1_chr10_-_101380086 AF327403 AJ303078 AF327402 AJ303077 BC058937	227703	-	AK308618|CNNM1|26507|cyclin M1##NM_020348|CNNM1|26507|cyclin M1##AJ299720|HPSE2|60495|heparanase 2##AK094037|HPSE2|60495|heparanase 2##BC112356|HPSE2|60495|heparanase 2##AF282885|HPSE2|60495|heparanase 2##AF282886|HPSE2|60495|heparanase 2##AF282887|HPSE2|60495|heparanase 2##AJ299719|HPSE2|60495|heparanase 2##AK314759|HPSE2|60495|heparanase 2##NM_001166244|HPSE2|60495|heparanase 2##NM_001166245|HPSE2|60495|heparanase 2##NM_001166246|HPSE2|60495|heparanase 2##NM_021828|HPSE2|60495|heparanase 2##AK301916|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AY513279|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##M37400|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AF052153|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##BC000498|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK312684|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK293483|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK309174|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##NM_002079|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##NM_145285|NKX2-3|159296|NK2 homeobox 3##BC025788|NKX2-3|159296|NK2 homeobox 3##AK313485|NKX2-3|159296|NK2 homeobox 3##AK300856|NKX2-3|159296|NK2 homeobox 3##AF327403|SLC25A28|81894|solute carrier family 25, member 28##AJ303078|SLC25A28|81894|solute carrier family 25, member 28##AF327402|SLC25A28|81894|solute carrier family 25, member 28##AJ303077|SLC25A28|81894|solute carrier family 25, member 28##BC058937|SLC25A28|81894|solute carrier family 25, member 28	0.998544	CTCF.p2:-1:0.999
chr11	131618188	131618311	reg1018300.p1	8.206	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-377780	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-831861	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-831904	-	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	162375	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	163090	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	1194765	-	NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.754603	CTCF.p2:2:0.755
chr9	117354840	117354948	reg1016826.p2	8.206	+	TSC_hg19_v1_chr9_+_117350103 CU678965 CR456971 CR542237	-4787	+	NM_004888 TSC_hg19_v1_chr9_+_117350048 BC003564 AF038954 BC008452	-4856	+	BC142684 TSC_hg19_v1_chr9_-_117267731 AK056190 BC142614 NM_001173425 NM_015404	-87164	-	TSC_hg19_v1_chr9_+_117373735 NM_153045 AK289383 BC107133 BC107134 BX649023	18875	+	NM_001199233	89474	-	AY434464 NM_001204344	199915	-	CR456971|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##CR542237|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC142684|DFNB31|25861|deafness, autosomal recessive 31##AK056190|DFNB31|25861|deafness, autosomal recessive 31##BC142614|DFNB31|25861|deafness, autosomal recessive 31##NM_001173425|DFNB31|25861|deafness, autosomal recessive 31##NM_015404|DFNB31|25861|deafness, autosomal recessive 31##NM_153045|C9orf91|203197|chromosome 9 open reading frame 91##AK289383|C9orf91|203197|chromosome 9 open reading frame 91##BC107133|C9orf91|203197|chromosome 9 open reading frame 91##BC107134|C9orf91|203197|chromosome 9 open reading frame 91##BX649023|C9orf91|203197|chromosome 9 open reading frame 91##NM_001199233|LOC100505478|100505478|uncharacterized LOC100505478##AY434464|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001204344|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15	0.440571	CTCF.p2:4:0.441
chr10	92848630	92848775	reg1017983.p1	8.205	+	X83703 NM_014391	-167674	-	AB528537 DQ892852 DQ896099 AY903446 BC005191 AK290960 BC018667 TSC_hg19_v1_chr10_-_92680845	-167886	-	TSC_hg19_v1_chr10_+_92631730 NM_001104546 NM_006413 AL833628 AK296196 U77665 AK312900 AK225532 DQ893181 DQ896488	-216980	+	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	74060	+	TSC_hg19_v1_chr10_+_92980445 NM_032373	131706	+	TSC_hg19_v1_chr10_+_92980539 AL832496	131832	+	X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##NM_001104546|RPP30|10556|ribonuclease P/MRP 30kDa subunit##NM_006413|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AL833628|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK296196|RPP30|10556|ribonuclease P/MRP 30kDa subunit##U77665|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK312900|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK225532|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ893181|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ896488|RPP30|10556|ribonuclease P/MRP 30kDa subunit##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5##NM_032373|PCGF5|84333|polycomb group ring finger 5##AL832496|PCGF5|84333|polycomb group ring finger 5	0.932469	CTCF.p2:-17:0.932
chr11	9635739	9635851	reg1012375.p2	8.205	+	AK122837 NM_001143976	-39562	+	TSC_hg19_v1_chr11_+_9595453 AB384747 EU832325 EU832410	-40328	+	BC051831 TSC_hg19_v1_chr11_+_9595437	-40362	+	TSC_hg19_v1_chr11_+_9685623 AK096859	49819	+	TSC_hg19_v1_chr11_+_9685627 NM_015055	49841	+	BC000616 TSC_hg19_v1_chr11_+_9685651 AF134894	49856	+	AK122837|WEE1|7465|WEE1 homolog (S. pombe)##NM_001143976|WEE1|7465|WEE1 homolog (S. pombe)##EU832325|WEE1|7465|WEE1 homolog (S. pombe)##EU832410|WEE1|7465|WEE1 homolog (S. pombe)##BC051831|WEE1|7465|WEE1 homolog (S. pombe)##AK096859|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##NM_015055|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000616|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF134894|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit	0.496917	CTCF.p2:0:0.497
chr14	97319281	97319428	reg1016186.p1	8.205	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-55639	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-350570	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-350608	+	AK098639 NM_182560	1858595	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	2418263	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	2418536	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.0	
chr8	141954409	141954532	reg1016798.p1	8.205	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-308846	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-432907	+	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	-433078	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	56786	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	184267	+	AK128212 NM_001080431	284202	-	BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4	0.834894	CTCF.p2:-12:0.835
chr10	116197596	116197686	reg1014949.p1	8.204	+	BC024314 NM_001001936 NM_032550	-33127	-	AK123108 BC033212 AK027470 TSC_hg19_v1_chr10_-_116164254 AK294969 AK291712 AF474151	-33399	-	TSC_hg19_v1_chr10_+_115999012 AK122716 NM_198496 AJ536328 AJ616914 BC128588 AY572972 BC143380	-198482	+	CU677968 TSC_hg19_v1_chr10_-_116251632	53966	-	TSC_hg19_v1_chr10_-_116286631 AK298709 BC002448	88961	-	TSC_hg19_v1_chr10_-_116286673 CR749819 NM_006720 AK098277	89038	-	BC024314|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_001001936|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_032550|AFAP1L2|84632|actin filament associated protein 1-like 2##AK123108|AFAP1L2|84632|actin filament associated protein 1-like 2##BC033212|AFAP1L2|84632|actin filament associated protein 1-like 2##AK294969|AFAP1L2|84632|actin filament associated protein 1-like 2##AK291712|AFAP1L2|84632|actin filament associated protein 1-like 2##AF474151|AFAP1L2|84632|actin filament associated protein 1-like 2##AK122716|VWA2|340706|von Willebrand factor A domain containing 2##NM_198496|VWA2|340706|von Willebrand factor A domain containing 2##AJ536328|VWA2|340706|von Willebrand factor A domain containing 2##AJ616914|VWA2|340706|von Willebrand factor A domain containing 2##BC128588|VWA2|340706|von Willebrand factor A domain containing 2##AY572972|VWA2|340706|von Willebrand factor A domain containing 2##BC143380|VWA2|340706|von Willebrand factor A domain containing 2##AK298709|ABLIM1|3983|actin binding LIM protein 1##BC002448|ABLIM1|3983|actin binding LIM protein 1##CR749819|ABLIM1|3983|actin binding LIM protein 1##NM_006720|ABLIM1|3983|actin binding LIM protein 1##AK098277|ABLIM1|3983|actin binding LIM protein 1	0.874519	CTCF.p2:9:0.875
chr14	46307945	46308074	reg1015897.p1	8.204	+	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-585363	-	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	-585642	-	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-702820	+	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	812974	-	BC028193 NM_182830	1504406	-	AK309211 NM_001113498	1836147	-	AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	0.991422	CTCF.p2:-9:0.991
chr8	82166247	82166363	reg1016654.p1	8.204	+	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	-141991	-	AK131274 NM_001033723	-379290	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-767821	+	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	26468	+	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	193364	-	AB528797 NM_001080526	207452	-	AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2##NM_001080526|FABP9|646480|fatty acid binding protein 9, testis	0.044201	
chrX	130875868	130876031	reg1015620.p4	8.204	+	BC137050 AB529233 NM_001004486	-197951	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-452537	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-452687	-	TSC_hg19_v1_chrX_-_130964633 AK097911	88702	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	281372	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	281691	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.0	
chr12	12889963	12890143	reg1010583.p1	8.203	+	TSC_hg19_v1_chr12_+_12878853 NM_001130415 AK127712 BC042478 AM393383	-11197	+	TSC_hg19_v1_chr12_+_12870308 AK312461 NM_004064 BC001971 AK298335	-19927	+	AK096388 NM_006143	-40933	-	BC126433 BC126435 NM_030817 TSC_hg19_v1_chr12_+_12938594 AK057867 AK225176 AK314392 AL136783	48524	+	AK310501 TSC_hg19_v1_chr12_+_12966285 AK302536 AL136666 NM_016355 NM_201224 AL833469 AK054574 BC068009 AB462951 AJ276704 AM393320 AM393714 AK225144 AF190165 BC009379 AK222940 AF078843 EF036507	76237	+	NM_003979	153902	+	NM_001130415|APOLD1|81575|apolipoprotein L domain containing 1##BC042478|APOLD1|81575|apolipoprotein L domain containing 1##AM393383|APOLD1|81575|apolipoprotein L domain containing 1##AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK096388|GPR19|2842|G protein-coupled receptor 19##NM_006143|GPR19|2842|G protein-coupled receptor 19##BC126433|APOLD1|81575|apolipoprotein L domain containing 1##BC126435|APOLD1|81575|apolipoprotein L domain containing 1##NM_030817|APOLD1|81575|apolipoprotein L domain containing 1##AK225176|APOLD1|81575|apolipoprotein L domain containing 1##AK314392|APOLD1|81575|apolipoprotein L domain containing 1##AL136783|APOLD1|81575|apolipoprotein L domain containing 1##AK310501|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK302536|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AL136666|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_016355|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_201224|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AL833469|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK054574|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC068009|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AJ276704|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AM393320|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AM393714|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK225144|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AF190165|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC009379|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK222940|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AF078843|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##EF036507|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_003979|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A	0.0	
chr17	26875263	26875406	reg1014123.p1	8.203	+	NM_003593 Y11739	-24376	+	TSC_hg19_v1_chr17_+_26800661 AK314684 NM_001145975 NM_001145976 NM_003984 U26209 BC096276 BC096277 BC096278 BC096279 AK091926 AK298388 AK303909 AK303936	-74628	+	CU678258 TSC_hg19_v1_chr17_+_26794963	-80431	+	AF028788 AF028789 TSC_hg19_v1_chr17_-_26879616 AK292329 BC027176 U40998	4276	-	NM_005148 NM_054035 TSC_hg19_v1_chr17_-_26879647 AB593014	4318	-	AY359112 AB057723 AB527641 CU686718 TSC_hg19_v1_chr17_-_26898525 AK055512 BC069228 AK075428 AK297046 AK314583	23195	-	NM_003593|FOXN1|8456|forkhead box N1##Y11739|FOXN1|8456|forkhead box N1##AK314684|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145975|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145976|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_003984|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##U26209|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096276|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096277|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096278|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096279|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK091926|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK298388|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303909|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303936|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AF028788|UNC119|9094|unc-119 homolog (C. elegans)##AF028789|UNC119|9094|unc-119 homolog (C. elegans)##AK292329|UNC119|9094|unc-119 homolog (C. elegans)##BC027176|UNC119|9094|unc-119 homolog (C. elegans)##U40998|UNC119|9094|unc-119 homolog (C. elegans)##NM_005148|UNC119|9094|unc-119 homolog (C. elegans)##NM_054035|UNC119|9094|unc-119 homolog (C. elegans)##AB593014|UNC119|9094|unc-119 homolog (C. elegans)##AY359112|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AB057723|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK055512|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##BC069228|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK075428|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK297046|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK314583|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S	0.94866	CTCF.p2:48:0.259	CTCF.p2:-56:0.690
chr20	40585069	40585215	reg1015668.p1	8.203	+	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-338081	-	AB089149 NM_052846	-589645	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	-615627	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	1233368	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	1501350	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	1501461	+	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3##AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6	0.016492	
chr1	101334025	101334158	reg1016180.p1	8.202	+	NM_001078 NM_001199834 NM_080682 TSC_hg19_v1_chr1_+_101185297 AK223266 AK291732 AK296692 BC068490 M30257 BC017276 BC085003 M60335 AB590609 EU831989 EU832082 X53051 CU686647	-148785	+	AK225748 TSC_hg19_v1_chr1_+_101004594	-329563	+	AB042410 BC036775 NM_022049	-330382	+	TSC_hg19_v1_chr1_-_101360249 BC014910	26176	-	TSC_hg19_v1_chr1_-_101360368 AK312895 AB009284 AF000416 AK096914 BC036015 AK298124 BC001649 BC001835 BC008722	26279	-	TSC_hg19_v1_chr1_-_101360405 NM_001033025 NM_001439	26320	-	NM_001078|VCAM1|7412|vascular cell adhesion molecule 1##NM_001199834|VCAM1|7412|vascular cell adhesion molecule 1##NM_080682|VCAM1|7412|vascular cell adhesion molecule 1##AK223266|VCAM1|7412|vascular cell adhesion molecule 1##AK291732|VCAM1|7412|vascular cell adhesion molecule 1##AK296692|VCAM1|7412|vascular cell adhesion molecule 1##BC068490|VCAM1|7412|vascular cell adhesion molecule 1##M30257|VCAM1|7412|vascular cell adhesion molecule 1##BC017276|VCAM1|7412|vascular cell adhesion molecule 1##BC085003|VCAM1|7412|vascular cell adhesion molecule 1##M60335|VCAM1|7412|vascular cell adhesion molecule 1##EU831989|VCAM1|7412|vascular cell adhesion molecule 1##EU832082|VCAM1|7412|vascular cell adhesion molecule 1##X53051|VCAM1|7412|vascular cell adhesion molecule 1##AK225748|GPR88|54112|G protein-coupled receptor 88##AB042410|GPR88|54112|G protein-coupled receptor 88##BC036775|GPR88|54112|G protein-coupled receptor 88##NM_022049|GPR88|54112|G protein-coupled receptor 88##BC014910|EXTL2|2135|exostoses (multiple)-like 2##AK312895|EXTL2|2135|exostoses (multiple)-like 2##AB009284|EXTL2|2135|exostoses (multiple)-like 2##AF000416|EXTL2|2135|exostoses (multiple)-like 2##AK096914|EXTL2|2135|exostoses (multiple)-like 2##BC036015|EXTL2|2135|exostoses (multiple)-like 2##AK298124|EXTL2|2135|exostoses (multiple)-like 2##NM_001033025|EXTL2|2135|exostoses (multiple)-like 2##NM_001439|EXTL2|2135|exostoses (multiple)-like 2	0.986298	CTCF.p2:27:0.986
chr7	23470061	23470184	reg1015957.p1	8.202	+	TSC_hg19_v1_chr7_+_23338957 BC012331 NM_138446 AK127742 AK316559	-131157	+	AF322909 TSC_hg19_v1_chr7_+_23286426 BC025297 BC011595 CU679974 CU689536 AB528457 DQ892084 DQ895277 BT007074	-183674	+	TSC_hg19_v1_chr7_+_23286407 AJ505015	-183717	+	TSC_hg19_v1_chr7_-_23509637 AB529064 CU688032	39557	-	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	39876	-	TSC_hg19_v1_chr7_+_23530136 BC026177	60045	+	BC012331|C7orf30|115416|chromosome 7 open reading frame 30##NM_138446|C7orf30|115416|chromosome 7 open reading frame 30##AK127742|C7orf30|115416|chromosome 7 open reading frame 30##AK316559|C7orf30|115416|chromosome 7 open reading frame 30##AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb##BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb##BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb##BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb##AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32	0.952731	CTCF.p2:-12:0.953
chr16	69743532	69743665	reg1015835.p1	8.200	+	U80231 AK000312 TSC_hg19_v1_chr16_+_69726827	-16809	+	AF134870 TSC_hg19_v1_chr16_+_69681070	-62584	+	AJ243298 AJ243299 TSC_hg19_v1_chr16_+_69600112 AJ005683 AJ005684	-143417	+	TSC_hg19_v1_chr16_-_69760362 AK316246	16762	-	TSC_hg19_v1_chr16_-_69760367 AK298896 J03934	16781	-	AK223050 BC000906 BC007659 AK312368 TSC_hg19_v1_chr16_-_69760464 AK297125 AK297979 AK307533 BC107739 AK309513 NM_000903 NM_001025433 NM_001025434	16890	-	U80231|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AK000312|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AF134870|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ243298|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ243299|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ005683|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ005684|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AK316246|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK298896|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##J03934|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK223050|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##BC000906|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##BC007659|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK312368|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK297125|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK297979|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK307533|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##BC107739|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##AK309513|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##NM_000903|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##NM_001025433|NQO1|1728|NAD(P)H dehydrogenase, quinone 1##NM_001025434|NQO1|1728|NAD(P)H dehydrogenase, quinone 1	0.994872	CTCF.p2:-6:0.995
chr17	1968419	1968556	reg1018675.p1	8.200	+	DQ187313 NM_001098202	-8930	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-10089	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-23179	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	238325	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	238553	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	238765	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.912613	CTCF.p2:0:0.913
chr22	32268402	32268503	reg1014923.p1	8.200	+	NM_001136029 AB014545 BC146766 AJ698950 AJ698951 AJ704764 AB383936 CU691240	-117575	+	TSC_hg19_v1_chr22_+_32150004 NM_001007188 NM_001242896 NM_014662 AK300737 BC057797 BC136612 BC144291	-118404	+	TSC_hg19_v1_chr22_+_32149962 AK294987	-118489	+	TSC_hg19_v1_chr22_+_32340520 NM_003405 X78138 BC003047 S80794	72036	+	TSC_hg19_v1_chr22_+_32340608 AK312650 CR456612 AB385077 L20422 CU013208 CU013496	72203	+	AJ704765 AJ704766 AL050256 NM_015372 AK315264	72869	-	NM_001136029|DEPDC5|9681|DEP domain containing 5##AB014545|DEPDC5|9681|DEP domain containing 5##BC146766|DEPDC5|9681|DEP domain containing 5##AJ698950|DEPDC5|9681|DEP domain containing 5##AJ698951|DEPDC5|9681|DEP domain containing 5##AJ704764|DEPDC5|9681|DEP domain containing 5##NM_001007188|DEPDC5|9681|DEP domain containing 5##NM_001242896|DEPDC5|9681|DEP domain containing 5##NM_014662|DEPDC5|9681|DEP domain containing 5##AK300737|DEPDC5|9681|DEP domain containing 5##BC057797|DEPDC5|9681|DEP domain containing 5##BC136612|DEPDC5|9681|DEP domain containing 5##BC144291|DEPDC5|9681|DEP domain containing 5##AK294987|DEPDC5|9681|DEP domain containing 5##NM_003405|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##X78138|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##BC003047|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##S80794|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##AK312650|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CR456612|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##L20422|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CU013208|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CU013496|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##AJ704765|C22orf24|25775|chromosome 22 open reading frame 24##AJ704766|C22orf24|25775|chromosome 22 open reading frame 24##AL050256|C22orf24|25775|chromosome 22 open reading frame 24##NM_015372|C22orf24|25775|chromosome 22 open reading frame 24##AK315264|C22orf24|25775|chromosome 22 open reading frame 24	0.303345	CTCF.p2:3:0.303
chr2	38265330	38265448	reg1016617.p2	8.199	+	NM_001170793 NM_144713 AK057516 AF435956	-87789	+	BC024243 NM_001170792	-109488	+	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	-112957	+	U03688 BC012049 TSC_hg19_v1_chr2_-_38303294 AK297039 AK303862	37893	-	TSC_hg19_v1_chr2_-_38303315 AK312686 NM_000104	37931	-	AK316179 TSC_hg19_v1_chr2_-_38525609	260180	-	NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1##BC024243|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1##U03688|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##BC012049|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK303862|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK312686|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_000104|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK316179|ATL2|64225|atlastin GTPase 2	0.040932	
chr16	64123729	64123839	reg1017051.p1	8.198	+	AK124734 NM_001796	-2053046	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-5355587	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-5405128	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	1032118	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	1032184	-	TSC_hg19_v1_chr16_-_65155987 AK297377	1032210	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.8835	CTCF.p2:-16:0.883
chr19	1240392	1240516	reg1016092.p2	8.198	+	BC028156 NM_152769	-2540	-	BC146278 BC148727 TSC_hg19_v1_chr19_+_1207211	-33281	+	BC007981 AF035625 BC019334 AK314858 AB209553 EF644172 DQ893232 DQ896561 AB528360 CU675883 U63333 TSC_hg19_v1_chr19_+_1206921	-33763	+	TSC_hg19_v1_chr19_+_1241763 BC002389 BC004426 BC018817 NM_001001975 NM_001687	1298	+	AK094357 S87916 S87918 X63422 X63423 TSC_hg19_v1_chr19_+_1241766	1312	+	TSC_hg19_v1_chr19_+_1241769 BC058927	1314	+	BC028156|C19orf26|255057|chromosome 19 open reading frame 26##NM_152769|C19orf26|255057|chromosome 19 open reading frame 26##BC146278|EFNA2|1943|ephrin-A2##BC148727|EFNA2|1943|ephrin-A2##BC007981|STK11|6794|serine/threonine kinase 11##AF035625|STK11|6794|serine/threonine kinase 11##BC019334|STK11|6794|serine/threonine kinase 11##AK314858|STK11|6794|serine/threonine kinase 11##AB209553|STK11|6794|serine/threonine kinase 11##EF644172|STK11|6794|serine/threonine kinase 11##DQ893232|STK11|6794|serine/threonine kinase 11##DQ896561|STK11|6794|serine/threonine kinase 11##U63333|STK11|6794|serine/threonine kinase 11##BC002389|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC004426|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC018817|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001001975|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001687|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##AK094357|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87916|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87918|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63422|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63423|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC058927|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	0.975559	CTCF.p2:3:0.976
chr1	211643544	211643649	reg1016535.p1	8.197	+	TSC_hg19_v1_chr1_+_211556168 BC005997	-87428	+	TSC_hg19_v1_chr1_+_211556144 AK130858	-87449	+	BC029600 NM_145759	-123891	+	AY191519 NM_001164688 NM_183059	22662	-	AF364518 TSC_hg19_v1_chr1_-_211751805	108166	-	AB451467 TSC_hg19_v1_chr1_-_211752048	108404	-	BC005997|LINC00467|84791|long intergenic non-protein coding RNA 467##AK130858|LINC00467|84791|long intergenic non-protein coding RNA 467##BC029600|TRAF5|7188|TNF receptor-associated factor 5##NM_145759|TRAF5|7188|TNF receptor-associated factor 5##AY191519|RD3|343035|retinal degeneration 3##NM_001164688|RD3|343035|retinal degeneration 3##NM_183059|RD3|343035|retinal degeneration 3##AF364518|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1	0.713067	CTCF.p2:-6:0.713
chr1	242149263	242149370	reg1017090.p1	8.197	+	NM_003686 NM_006027 AF042282 AF091740 AF060479 AF084974	-137231	+	BC007491 TSC_hg19_v1_chr1_+_242011556	-137766	+	TSC_hg19_v1_chr1_+_242011520 NM_130398 AK291291	-137812	+	BC132986 BC132988 AF276659 BC127722 NM_001004343	13058	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	463454	-	AK098092 NM_152666	538681	-	NM_003686|EXO1|9156|exonuclease 1##NM_006027|EXO1|9156|exonuclease 1##AF042282|EXO1|9156|exonuclease 1##AF091740|EXO1|9156|exonuclease 1##AF060479|EXO1|9156|exonuclease 1##AF084974|EXO1|9156|exonuclease 1##BC007491|EXO1|9156|exonuclease 1##NM_130398|EXO1|9156|exonuclease 1##AK291291|EXO1|9156|exonuclease 1##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5	0.989203	CTCF.p2:-1:0.989
chr12	57487165	57487267	reg1015615.p2	8.197	+	TSC_hg19_v1_chr12_+_57482929 BC007756 AB463930 CU688106	-4229	+	TSC_hg19_v1_chr12_+_57482900 BC065931 AK314229 U48361	-4314	+	TSC_hg19_v1_chr12_+_57482684 NM_005967	-4537	+	AK291044 NM_001178079	16872	-	TSC_hg19_v1_chr12_-_57505013 AK316236 BC075852 AK298721 AK312471 U16031	17789	-	TSC_hg19_v1_chr12_-_57505144 AK290431 AK299094 AK316142 BC004973 BC005823	17929	-	BC007756|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##BC065931|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##AK314229|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##U48361|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##NM_005967|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##AK291044|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178079|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK316236|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC075852|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK298721|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK312471|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##U16031|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK290431|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK299094|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK316142|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC004973|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC005823|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced	0.976445	CTCF.p2:8:0.976
chr14	57784091	57784204	reg1015617.p2	8.197	+	NM_018229 TSC_hg19_v1_chr14_+_57735754 AL136685 BC013174 AK225345 AK001675 AK303999	-48429	+	TSC_hg19_v1_chr14_-_57735618 NM_006544 AK312523	-48522	-	TSC_hg19_v1_chr14_-_57735559 BC041126 BC031298	-48567	-	AK296372 AK092674 AX747665 NM_001011713 TSC_hg19_v1_chr14_+_57857298 AK304257 AK307348	73136	+	TSC_hg19_v1_chr14_+_57857318 BC118589 BC122557	73185	+	HQ258368 BC117405 BC143565 BC143566 BC143567 BC143568 AK307238 AK223127 AK001512 BC028060 NM_018168	176356	-	NM_018229|MUDENG|55745|MU-2/AP1M2 domain containing, death-inducing##AL136685|MUDENG|55745|MU-2/AP1M2 domain containing, death-inducing##BC013174|MUDENG|55745|MU-2/AP1M2 domain containing, death-inducing##AK225345|MUDENG|55745|MU-2/AP1M2 domain containing, death-inducing##AK001675|MUDENG|55745|MU-2/AP1M2 domain containing, death-inducing##AK303999|MUDENG|55745|MU-2/AP1M2 domain containing, death-inducing##NM_006544|EXOC5|10640|exocyst complex component 5##AK312523|EXOC5|10640|exocyst complex component 5##BC041126|EXOC5|10640|exocyst complex component 5##BC031298|EXOC5|10640|exocyst complex component 5##AK296372|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK092674|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##NM_001011713|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK304257|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK307348|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##HQ258368|C14orf105|55195|chromosome 14 open reading frame 105##BC117405|C14orf105|55195|chromosome 14 open reading frame 105##BC143565|C14orf105|55195|chromosome 14 open reading frame 105##BC143566|C14orf105|55195|chromosome 14 open reading frame 105##BC143567|C14orf105|55195|chromosome 14 open reading frame 105##BC143568|C14orf105|55195|chromosome 14 open reading frame 105##AK307238|C14orf105|55195|chromosome 14 open reading frame 105##AK223127|C14orf105|55195|chromosome 14 open reading frame 105##AK001512|C14orf105|55195|chromosome 14 open reading frame 105##BC028060|C14orf105|55195|chromosome 14 open reading frame 105##NM_018168|C14orf105|55195|chromosome 14 open reading frame 105	0.763064	CTCF.p2:-6:0.736
chr4	115729097	115729211	reg1018468.p1	8.197	+	NM_003360 U30930	-185632	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-209571	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-828315	-	BC113075 BC012326 AK289670 AB036429 NM_022569	305827	-	AK074617 BC030831 NM_152402	2277579	-	TSC_hg19_v1_chr4_+_118954764 AY358852	3225617	+	NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.871022	CTCF.p2:-1:0.871
chr4	134067967	134068046	reg1014492.p1	8.197	+	NM_001099783	-4050725	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-4053139	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-4053416	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	2450	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	5277	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	1054912	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.0	
chr1	101072132	101072262	reg1016984.p2	8.196	+	AK225748 TSC_hg19_v1_chr1_+_101004594	-67669	+	AB042410 BC036775 NM_022049	-68488	+	BC071578 TSC_hg19_v1_chr1_+_100818053 AF064103 AK310657 AF000367	-254094	+	NM_001078 NM_001199834 NM_080682 TSC_hg19_v1_chr1_+_101185297 AK223266 AK291732 AK296692 BC068490 M30257 BC017276 BC085003 M60335 AB590609 EU831989 EU832082 X53051 CU686647	113109	+	TSC_hg19_v1_chr1_-_101360249 BC014910	288070	-	TSC_hg19_v1_chr1_-_101360368 AK312895 AB009284 AF000416 AK096914 BC036015 AK298124 BC001649 BC001835 BC008722	288173	-	AK225748|GPR88|54112|G protein-coupled receptor 88##AB042410|GPR88|54112|G protein-coupled receptor 88##BC036775|GPR88|54112|G protein-coupled receptor 88##NM_022049|GPR88|54112|G protein-coupled receptor 88##BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_001078|VCAM1|7412|vascular cell adhesion molecule 1##NM_001199834|VCAM1|7412|vascular cell adhesion molecule 1##NM_080682|VCAM1|7412|vascular cell adhesion molecule 1##AK223266|VCAM1|7412|vascular cell adhesion molecule 1##AK291732|VCAM1|7412|vascular cell adhesion molecule 1##AK296692|VCAM1|7412|vascular cell adhesion molecule 1##BC068490|VCAM1|7412|vascular cell adhesion molecule 1##M30257|VCAM1|7412|vascular cell adhesion molecule 1##BC017276|VCAM1|7412|vascular cell adhesion molecule 1##BC085003|VCAM1|7412|vascular cell adhesion molecule 1##M60335|VCAM1|7412|vascular cell adhesion molecule 1##EU831989|VCAM1|7412|vascular cell adhesion molecule 1##EU832082|VCAM1|7412|vascular cell adhesion molecule 1##X53051|VCAM1|7412|vascular cell adhesion molecule 1##BC014910|EXTL2|2135|exostoses (multiple)-like 2##AK312895|EXTL2|2135|exostoses (multiple)-like 2##AB009284|EXTL2|2135|exostoses (multiple)-like 2##AF000416|EXTL2|2135|exostoses (multiple)-like 2##AK096914|EXTL2|2135|exostoses (multiple)-like 2##BC036015|EXTL2|2135|exostoses (multiple)-like 2##AK298124|EXTL2|2135|exostoses (multiple)-like 2	0.0	
chr1	26935537	26935632	reg1013625.p1	8.196	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	-63226	+	TSC_hg19_v1_chr1_+_26872335 AK092955	-63261	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-79249	+	NM_006015 NM_139135 AF231056	86938	+	AB210022 AF219114 AB051293 AF265208 TSC_hg19_v1_chr1_+_27024003	88385	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	165704	+	AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.0	
chr2	75691800	75691929	reg1016741.p1	8.196	+	AK289765 NM_001058 NM_015727	-265236	-	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-506079	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-629613	-	BC016157 TSC_hg19_v1_chr2_-_75788066	96183	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	96226	-	AK023453 NM_032181	104983	-	AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A	0.957756	CTCF.p2:13:0.958
chr7	44887343	44887471	reg1014888.p2	8.196	+	Y00052 TSC_hg19_v1_chr7_+_44836309 AB464007 DQ892625 DQ895865 CU674338 AB451307 AB451438 CR456707	-51091	+	TSC_hg19_v1_chr7_+_44836279 AK290851 BC005982 AK130101 AK293003 BC007104 BC013915 AK026569 AK297340 AK316564 BC093076 AK290085 BC005320 D28351 BC106030 BC073992 BC003026 BC000689	-51120	+	TSC_hg19_v1_chr7_+_44836244 BC137057 BC137058 NM_021130	-51190	+	TSC_hg19_v1_chr7_-_44887589 AF081192	171	-	BC014885 AB209001 AK129989 BC000098 BC070169 TSC_hg19_v1_chr7_-_44887654	230	-	TSC_hg19_v1_chr7_-_44887667 AK023973	262	-	Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##D28351|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AF081192|H2AFV|94239|H2A histone family, member V##BC014885|H2AFV|94239|H2A histone family, member V##AB209001|H2AFV|94239|H2A histone family, member V##AK129989|H2AFV|94239|H2A histone family, member V##BC000098|H2AFV|94239|H2A histone family, member V##BC070169|H2AFV|94239|H2A histone family, member V##AK023973|H2AFV|94239|H2A histone family, member V	0.729438	CTCF.p2:20:0.729
chr20	50767328	50767456	reg1015443.p2	8.195	+	AY170621 AY170622 AY172738 BC111714 AK001666 NM_020436	-348396	-	TSC_hg19_v1_chr20_-_50384925 NM_006045	-382464	-	TSC_hg19_v1_chr20_-_50384875 AB385363 AB014511 AK299064	-382514	-	BT009760 AB527686 BC021087 AK001744 TSC_hg19_v1_chr20_-_50808313 AK090547 BC031524 AK001596 AK222712	40863	-	BC012759 BC041622 NM_018197 NM_022088 NM_199426 NM_199427	41131	-	BX640770 NM_173485	821553	+	AY170621|SALL4|57167|sal-like 4 (Drosophila)##AY170622|SALL4|57167|sal-like 4 (Drosophila)##AY172738|SALL4|57167|sal-like 4 (Drosophila)##BC111714|SALL4|57167|sal-like 4 (Drosophila)##AK001666|SALL4|57167|sal-like 4 (Drosophila)##NM_020436|SALL4|57167|sal-like 4 (Drosophila)##NM_006045|ATP9A|10079|ATPase, class II, type 9A##AB014511|ATP9A|10079|ATPase, class II, type 9A##AK299064|ATP9A|10079|ATPase, class II, type 9A##BT009760|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC021087|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001744|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK090547|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC031524|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001596|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK222712|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC012759|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC041622|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_018197|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_022088|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199426|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199427|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2	0.913843	CTCF.p2:-8:0.914
chr1	166403048	166403152	reg1012241.p1	8.194	+	TSC_hg19_v1_chr1_-_166136076 BC114214	-266960	-	TSC_hg19_v1_chr1_-_166135982 AB593134	-267115	-	TSC_hg19_v1_chr1_-_166135951 NM_001017961	-267146	-	AK293946 AK299537 TSC_hg19_v1_chr1_+_166808680	405592	+	TSC_hg19_v1_chr1_+_166808734 AB040946 NM_017542 AK056711 BC131624	405645	+	AB590621 EU446601 AK290964 TSC_hg19_v1_chr1_-_166845502 BC015401 AK309250	442398	-	BC114214|FAM78B|149297|family with sequence similarity 78, member B##NM_001017961|FAM78B|149297|family with sequence similarity 78, member B##AK293946|POGK|57645|pogo transposable element with KRAB domain##AK299537|POGK|57645|pogo transposable element with KRAB domain##AB040946|POGK|57645|pogo transposable element with KRAB domain##NM_017542|POGK|57645|pogo transposable element with KRAB domain##AK056711|POGK|57645|pogo transposable element with KRAB domain##BC131624|POGK|57645|pogo transposable element with KRAB domain##EU446601|TADA1|117143|transcriptional adaptor 1##AK290964|TADA1|117143|transcriptional adaptor 1##BC015401|TADA1|117143|transcriptional adaptor 1##AK309250|TADA1|117143|transcriptional adaptor 1	0.200221	CTCF.p2:13:0.200
chr16	57202033	57202154	reg1015366.p2	8.193	+	TSC_hg19_v1_chr16_+_57126530 AK315394	-75520	+	TSC_hg19_v1_chr16_+_57126513 AF492484 BC053658	-75585	+	TSC_hg19_v1_chr16_+_57126462 NM_152727	-75628	+	AK023291 TSC_hg19_v1_chr16_-_57219949 AF212249 AF271785 BC020536	17819	-	AK025452 TSC_hg19_v1_chr16_-_57219950	17857	-	TSC_hg19_v1_chr16_-_57219952 NM_024946	17870	-	AK315394|CPNE2|221184|copine II##AF492484|CPNE2|221184|copine II##BC053658|CPNE2|221184|copine II##NM_152727|CPNE2|221184|copine II##AK023291|FAM192A|80011|family with sequence similarity 192, member A##AF212249|FAM192A|80011|family with sequence similarity 192, member A##AF271785|FAM192A|80011|family with sequence similarity 192, member A##BC020536|FAM192A|80011|family with sequence similarity 192, member A##AK025452|FAM192A|80011|family with sequence similarity 192, member A##NM_024946|FAM192A|80011|family with sequence similarity 192, member A	0.435796	CTCF.p2:7:0.436
chr18	73881880	73881987	reg1017102.p2	8.193	+	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-742311	-	TSC_hg19_v1_chr18_+_72998258 AK223545 BC024152	-883591	+	TSC_hg19_v1_chr18_+_72922751 NM_005786 AK091155 AX746813	-959188	+	BC108287 TSC_hg19_v1_chr18_-_74092260	210317	-	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	325222	-	TSC_hg19_v1_chr18_-_74534239 BC032908	652306	-	BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1##BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1##NM_005786|TSHZ1|10194|teashirt zinc finger homeobox 1##BC108287|ZNF516|9658|zinc finger protein 516##D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC032908|LOC100131655|100131655|uncharacterized LOC100131655	0.146575	
chr6	134499745	134499867	reg1015967.p2	8.193	+	TSC_hg19_v1_chr6_-_134498984 FM205708 AK293383 NM_001143677	-814	-	NM_001143678 AK298688	-2708	-	FM205707 TSC_hg19_v1_chr6_-_134496850	-2945	-	AK055077 NM_001143676	139389	-	TSC_hg19_v1_chr6_+_134758857 AK055166	259042	+	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	771426	-	FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143678|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK298688|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205707|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK055166|LOC154092|154092|uncharacterized LOC154092##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1	0.015358	
chr8	144926251	144926362	reg1015567.p1	8.193	+	TSC_hg19_v1_chr8_-_144923180 BC071605 AK293943 NM_178564	-3147	-	TSC_hg19_v1_chr8_-_144911540 AF114818 AK292373 NM_014281 NM_078480	-14756	-	TSC_hg19_v1_chr8_-_144911508 BC008875	-14795	-	AB051895 NM_031308	21127	-	AF330791 TSC_hg19_v1_chr8_-_145013766 AY480051 NM_201384	87397	-	AY480050 NM_201383 TSC_hg19_v1_chr8_-_145016793	90455	-	BC071605|NRBP2|340371|nuclear receptor binding protein 2##AK293943|NRBP2|340371|nuclear receptor binding protein 2##NM_178564|NRBP2|340371|nuclear receptor binding protein 2##AF114818|PUF60|22827|poly-U binding splicing factor 60KDa##AK292373|PUF60|22827|poly-U binding splicing factor 60KDa##NM_014281|PUF60|22827|poly-U binding splicing factor 60KDa##NM_078480|PUF60|22827|poly-U binding splicing factor 60KDa##BC008875|PUF60|22827|poly-U binding splicing factor 60KDa##AB051895|EPPK1|83481|epiplakin 1##NM_031308|EPPK1|83481|epiplakin 1##AY480051|PLEC|5339|plectin##NM_201384|PLEC|5339|plectin##AY480050|PLEC|5339|plectin##NM_201383|PLEC|5339|plectin	0.830068	CTCF.p2:-9:0.830
chr11	107469448	107469558	reg1016046.p1	8.192	+	TSC_hg19_v1_chr11_+_107462073 BC028725	-7427	+	TSC_hg19_v1_chr11_+_107461998 AK303689 AK054794	-7518	+	TSC_hg19_v1_chr11_+_107461813 AK297351 NM_001130037 NM_018712	-7692	+	BC104185 BC113930 BC113987 BC104150 BC094685 AK312097 BC005261 U96094 NM_003063	113256	-	CU691672 TSC_hg19_v1_chr11_-_107729514 AK023080 BC048302	260002	-	AK300582 TSC_hg19_v1_chr11_-_107729530 BC039195	260085	-	BC028725|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK303689|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK054794|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1##BC104185|SLN|6588|sarcolipin##BC113930|SLN|6588|sarcolipin##BC113987|SLN|6588|sarcolipin##BC104150|SLN|6588|sarcolipin##BC094685|SLN|6588|sarcolipin##AK312097|SLN|6588|sarcolipin##BC005261|SLN|6588|sarcolipin##U96094|SLN|6588|sarcolipin##NM_003063|SLN|6588|sarcolipin##AK023080|SLC35F2|54733|solute carrier family 35, member F2##BC048302|SLC35F2|54733|solute carrier family 35, member F2##AK300582|SLC35F2|54733|solute carrier family 35, member F2##BC039195|SLC35F2|54733|solute carrier family 35, member F2	0.13433	
chr11	18743716	18743849	reg1018234.p1	8.192	+	TSC_hg19_v1_chr11_+_18720347 BC035692 NM_153347	-23434	+	TSC_hg19_v1_chr11_+_18720321 AK074600	-23479	+	TSC_hg19_v1_chr11_-_18655962 BX647798 NM_194285 AK096760	-87782	-	BC115396 BC115397 AK095113 NM_173588	3965	-	AK294374 BC064807 AK316270 AK294673 BC039897 AK295604 AK090923 AX746685 AL832541 NM_001039970 NM_006906 NM_032781 TSC_hg19_v1_chr11_-_18813404	69483	-	BC096835 NM_147199	212764	-	BC035692|TMEM86A|144110|transmembrane protein 86A##NM_153347|TMEM86A|144110|transmembrane protein 86A##AK074600|TMEM86A|144110|transmembrane protein 86A##BX647798|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##NM_194285|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##AK096760|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##BC115396|IGSF22|283284|immunoglobulin superfamily, member 22##BC115397|IGSF22|283284|immunoglobulin superfamily, member 22##AK095113|IGSF22|283284|immunoglobulin superfamily, member 22##NM_173588|IGSF22|283284|immunoglobulin superfamily, member 22##AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC096835|MRGPRX1|259249|MAS-related GPR, member X1##NM_147199|MRGPRX1|259249|MAS-related GPR, member X1	0.0	
chr1	211307575	211307694	reg1007361.p1	8.192	+	AF078741 AF078742 BC113709 BC143599 TSC_hg19_v1_chr1_-_211307437 AJ001366 NM_002238 NM_172362	-249	-	NM_001170580 BC051191	-804993	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	-805369	+	TSC_hg19_v1_chr1_+_211432710 NM_001136223 NM_001136224 NM_001136225	125074	+	TSC_hg19_v1_chr1_+_211432726 AK131312	125093	+	TSC_hg19_v1_chr1_+_211432740 AK300942 AK302664	125119	+	AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_001170580|HHAT|55733|hedgehog acyltransferase##BC051191|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase##NM_001136223|RCOR3|55758|REST corepressor 3##NM_001136224|RCOR3|55758|REST corepressor 3##NM_001136225|RCOR3|55758|REST corepressor 3##AK131312|RCOR3|55758|REST corepressor 3##AK300942|RCOR3|55758|REST corepressor 3##AK302664|RCOR3|55758|REST corepressor 3	1.12767	CTCF.p2:46:0.235	CTCF.p2:-64:0.893
chr15	81400899	81401024	reg1016755.p1	8.192	+	TSC_hg19_v1_chr15_+_81293344 NM_022566	-107617	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	-118761	-	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	-329240	+	AK302120 BC062471 NM_173528 AK307565	25666	+	AK124725 NM_001172128 AK124565 AK131530	88257	+	NM_172217 AY324389	116728	+	NM_022566|MESDC1|59274|mesoderm development candidate 1##D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26##AK124725|IL16|3603|interleukin 16##NM_001172128|IL16|3603|interleukin 16##AK124565|IL16|3603|interleukin 16##AK131530|IL16|3603|interleukin 16##NM_172217|IL16|3603|interleukin 16##AY324389|IL16|3603|interleukin 16	0.710381	CTCF.p2:0:0.710
chr18	23476291	23476394	reg1014969.p1	8.192	+	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	-544179	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	-544305	-	TSC_hg19_v1_chr18_-_22931121 AB385259	-545194	-	AB527567 EU832762 GQ129305 AB300354 AB300355 AB300356 AB300357 AF230662 AF244972 AF257500 AF343880 BC096221 BC096222 BC096223 BC096224 CR542088 CR542103 X79201 TSC_hg19_v1_chr18_-_23670574 AK304305 AK316302 AK316338 AK299082 AK307923 AK289510 NM_001007559 NM_005637 AK301504	194238	-	BC042820 NM_001025096 NM_001025097 NM_144662 BC025393 BC028371 BC028686 BC025389 BC047355 BC021713	237506	+	TSC_hg19_v1_chr18_+_23806444 NM_005640 AB234096	330075	+	AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##EU832762|SS18|6760|synovial sarcoma translocation, chromosome 18##GQ129305|SS18|6760|synovial sarcoma translocation, chromosome 18##AF244972|SS18|6760|synovial sarcoma translocation, chromosome 18##AF343880|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096221|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096222|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096223|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096224|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542088|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542103|SS18|6760|synovial sarcoma translocation, chromosome 18##X79201|SS18|6760|synovial sarcoma translocation, chromosome 18##AK304305|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316302|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316338|SS18|6760|synovial sarcoma translocation, chromosome 18##AK299082|SS18|6760|synovial sarcoma translocation, chromosome 18##AK307923|SS18|6760|synovial sarcoma translocation, chromosome 18##AK289510|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001007559|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_005637|SS18|6760|synovial sarcoma translocation, chromosome 18##AK301504|SS18|6760|synovial sarcoma translocation, chromosome 18##BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_005640|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##AB234096|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa	0.207458	
chr18	43201049	43201182	reg1019946.p1	8.192	+	AF349446 NM_007163	-6350	+	NM_001242692 AK292422	-408163	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-940247	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	102989	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	103042	+	NM_001146037	105802	+	AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.975984	CTCF.p2:10:0.976
chr4	164676362	164676493	reg1007746.p2	8.192	+	AB463878 AK000675 AK301408 NM_017923	-141712	-	TSC_hg19_v1_chr4_+_164415868 BC011842	-260554	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-260585	+	NM_012403	442435	-	AK289711 NM_001166373	627979	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	1201675	+	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39	0.982604	CTCF.p2:3:0.983
chr10	135460748	135460873	reg1017035.p1	8.191	+	AY744466 NM_001080998	-20512	-	AY027807 NM_130784	-77935	-	AK309935 AK314978 BC034821 NM_001143763 NM_001143764	-81701	-	NM_001127386 NM_033178 NM_001127387 NM_001127388 NM_001127389 NM_001164467 NM_012147	19589	+	NM_001127386 NM_033178 NM_001127387 NM_001127388 NM_001127389 NM_001164467 NM_012147	22899	+	NM_001127386 NM_001127388 NM_001127389 NM_001164467	29468	+	AY744466|FRG2B|441581|FSHD region gene 2 family, member B##NM_001080998|FRG2B|441581|FSHD region gene 2 family, member B##AY027807|SYCE1|93426|synaptonemal complex central element protein 1##NM_130784|SYCE1|93426|synaptonemal complex central element protein 1##AK309935|SYCE1|93426|synaptonemal complex central element protein 1##AK314978|SYCE1|93426|synaptonemal complex central element protein 1##BC034821|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143763|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143764|SYCE1|93426|synaptonemal complex central element protein 1##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_033178|DUX4|22947|double homeobox 4##NM_001127387|DUX4L7|653543|double homeobox 4 like 7##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_012147|DUX2|26583|double homeobox 2##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_033178|DUX4|22947|double homeobox 4##NM_001127387|DUX4L7|653543|double homeobox 4 like 7##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_012147|DUX2|26583|double homeobox 2##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3	0.996146	CTCF.p2:-24:0.996
chr11	3238480	3238593	reg1016908.p1	8.191	+	TSC_hg19_v1_chr11_-_3186559 NM_001144063 NM_020896 NM_145638	-51967	-	AB074006 TSC_hg19_v1_chr11_-_3186534 AK293000 AK297475 AK056510	-51998	-	TSC_hg19_v1_chr11_-_3186518 AK303205	-52024	-	AB529240 AY255583 NM_001164377	1506	-	AK293940 NM_001039165	15079	-	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	161843	-	NM_001144063|OSBPL5|114879|oxysterol binding protein-like 5##NM_020896|OSBPL5|114879|oxysterol binding protein-like 5##NM_145638|OSBPL5|114879|oxysterol binding protein-like 5##AB074006|OSBPL5|114879|oxysterol binding protein-like 5##AK293000|OSBPL5|114879|oxysterol binding protein-like 5##AK297475|OSBPL5|114879|oxysterol binding protein-like 5##AK056510|OSBPL5|114879|oxysterol binding protein-like 5##AK303205|OSBPL5|114879|oxysterol binding protein-like 5##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195	0.994959	CTCF.p2:9:0.858
chr15	52475908	52476006	reg1014752.p1	8.191	+	TSC_hg19_v1_chr15_+_52472257 AF007131	-3622	+	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	-3816	-	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	-71011	-	NM_016194	7607	-	AF161352 TSC_hg19_v1_chr15_-_52529707	53749	-	AF272390 BC144611 BC064841 TSC_hg19_v1_chr15_-_52587968 AK301079 AK304136 NM_018728	111977	-	AF007131|LOC100129973|100129973|uncharacterized LOC100129973##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_016194|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF161352|MYO5C|55930|myosin VC##AF272390|MYO5C|55930|myosin VC##BC144611|MYO5C|55930|myosin VC##BC064841|MYO5C|55930|myosin VC##AK301079|MYO5C|55930|myosin VC##AK304136|MYO5C|55930|myosin VC##NM_018728|MYO5C|55930|myosin VC	0.0	
chr4	48447770	48447878	reg1013294.p1	8.191	+	TSC_hg19_v1_chr4_+_48343571 BC006139 BC007701 BC012067 NM_020846 AB040891	-104211	+	BC040993 TSC_hg19_v1_chr4_+_48343485 AK291006	-104413	+	BC101711 BC101713 BC143487 NM_003215 TSC_hg19_v1_chr4_-_48271858	-175989	-	TSC_hg19_v1_chr4_+_48485353 AK126542 NM_152679 BC019066 BC012048 DQ892628 EU176704 AY704414	37603	+	TSC_hg19_v1_chr4_+_48492278 BC136265 AY191416 NM_175619	44457	+	TSC_hg19_v1_chr4_-_48782266 AL833444	334445	-	BC006139|SLAIN2|57606|SLAIN motif family, member 2##BC007701|SLAIN2|57606|SLAIN motif family, member 2##BC012067|SLAIN2|57606|SLAIN motif family, member 2##NM_020846|SLAIN2|57606|SLAIN motif family, member 2##AB040891|SLAIN2|57606|SLAIN motif family, member 2##BC040993|SLAIN2|57606|SLAIN motif family, member 2##AK291006|SLAIN2|57606|SLAIN motif family, member 2##BC101711|TEC|7006|tec protein tyrosine kinase##BC101713|TEC|7006|tec protein tyrosine kinase##BC143487|TEC|7006|tec protein tyrosine kinase##NM_003215|TEC|7006|tec protein tyrosine kinase##AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC136265|ZAR1|326340|zygote arrest 1##AY191416|ZAR1|326340|zygote arrest 1##NM_175619|ZAR1|326340|zygote arrest 1##AL833444|FRYL|285527|FRY-like	0.300501	CTCF.p2:15:0.301
chr5	5887142	5887243	reg1016202.p2	8.191	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	-464283	+	TSC_hg19_v1_chr5_+_5422777 AK126937	-464417	+	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	-746681	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	491458	-	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	561661	+	TSC_hg19_v1_chr5_+_6449114 AK057805	561997	+	AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1	0.947417	CTCF.p2:7:0.947
chr6	16331689	16331816	reg1010260.p1	8.191	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-92901	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-188442	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-202315	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	429945	-	NM_001190766	770736	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	950102	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.978402	CTCF.p2:-14:0.978
chr7	49522866	49522993	reg1017088.p2	8.191	+	AK126220 AY204751 BX647273 NM_152701	-1311874	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-1393974	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	-1394129	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	290341	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	609895	-	NM_001161834	612752	+	AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72	0.477926	CTCF.p2:-10:0.478
chr10	1758068	1758199	reg1013962.p2	8.190	+	TSC_hg19_v1_chr10_+_1102822 AK292591	-655307	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-655364	+	BC057827 TSC_hg19_v1_chr10_-_1102645	-655481	-	AF034837 NM_018702	21536	-	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	1351614	+	AK092597 AX747622 NM_001242339	1352685	+	AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC057827|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet	0.949466	CTCF.p2:-20:0.949
chr3	19255200	19255334	reg1019421.p1	8.190	+	AK295633 AY053503 NM_144633 AB209053 AK309034	-65263	+	BC001744 NM_001131010	-775034	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	-788470	-	BC028198 AK097644 NM_144715	720421	-	TSC_hg19_v1_chr3_+_19988586 NM_004162	733422	+	TSC_hg19_v1_chr3_+_19988870 AK312618 BC018288 AK309287 AK295992 BC001267	733634	+	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC028198|EFHB|151651|EF-hand domain family, member B##AK097644|EFHB|151651|EF-hand domain family, member B##NM_144715|EFHB|151651|EF-hand domain family, member B##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family##AK312618|RAB5A|5868|RAB5A, member RAS oncogene family##BC018288|RAB5A|5868|RAB5A, member RAS oncogene family##AK309287|RAB5A|5868|RAB5A, member RAS oncogene family##AK295992|RAB5A|5868|RAB5A, member RAS oncogene family##BC001267|RAB5A|5868|RAB5A, member RAS oncogene family	0.656607	CTCF.p2:-10:0.657
chr10	79516348	79516483	reg1016173.p1	8.189	+	BC009695 AK098326 TSC_hg19_v1_chr10_-_79397567 BC062659 BC024965 NM_001014797 NM_001161352 NM_001161353 NM_002247	-118852	-	U13913 BC137115 BC137137 BC144496 CR627384 TSC_hg19_v1_chr10_-_79397499	-118929	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	-119009	-	TSC_hg19_v1_chr10_-_79628871 BC117695	112494	-	AB384502 NM_004747 AB011155 BC146794 TSC_hg19_v1_chr10_-_79686514	169987	-	AF021351 AY091459 AB384941 TSC_hg19_v1_chr10_-_79789272 BC041089 AK300329	272806	-	BC009695|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC062659|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC024965|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001014797|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161352|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161353|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_002247|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)##NM_004747|DLG5|9231|discs, large homolog 5 (Drosophila)##AB011155|DLG5|9231|discs, large homolog 5 (Drosophila)##BC146794|DLG5|9231|discs, large homolog 5 (Drosophila)##AF021351|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AY091459|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC041089|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AK300329|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa	0.038966	
chr8	135643873	135644002	reg1016206.p2	8.189	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-1059840	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-1334440	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1440607	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	64857	-	TSC_hg19_v1_chr8_-_135725053 AB463359	81142	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	81337	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.948647	CTCF.p2:13:0.949
chr1	28575107	28575245	reg1018321.p1	8.188	+	TSC_hg19_v1_chr1_+_28562634 NM_016311 NM_178190 NM_178191 AK316600 BC009677 AK000934 AB029042 BT009849 CR457097 EU832478 EU832558 BC017562 BC004955	-12527	+	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	-15645	-	S52624 AK292053 NM_001164721 NM_001164722	-54764	-	TSC_hg19_v1_chr1_+_28586034 NM_031459 BC013304 AY123223 BC033719 AL136551 AK315710 DQ892827 DQ896073 EU831582 EU831667 AB529110 CU680558	10982	+	NM_001127350 NM_017638 AK296130 AK000052 AB107222 BC002694 TSC_hg19_v1_chr1_+_28655576	80371	+	TSC_hg19_v1_chr1_+_28696251 NM_001048183 CR749449 AK025436 BC029266 BC016152 BC068508	121049	+	NM_016311|ATPIF1|93974|ATPase inhibitory factor 1##NM_178190|ATPIF1|93974|ATPase inhibitory factor 1##NM_178191|ATPIF1|93974|ATPase inhibitory factor 1##AK316600|ATPIF1|93974|ATPase inhibitory factor 1##BC009677|ATPIF1|93974|ATPase inhibitory factor 1##AK000934|ATPIF1|93974|ATPase inhibitory factor 1##AB029042|ATPIF1|93974|ATPase inhibitory factor 1##BT009849|ATPIF1|93974|ATPase inhibitory factor 1##CR457097|ATPIF1|93974|ATPase inhibitory factor 1##EU832478|ATPIF1|93974|ATPase inhibitory factor 1##EU832558|ATPIF1|93974|ATPase inhibitory factor 1##BC017562|ATPIF1|93974|ATPase inhibitory factor 1##BC004955|ATPIF1|93974|ATPase inhibitory factor 1##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##NM_031459|SESN2|83667|sestrin 2##BC013304|SESN2|83667|sestrin 2##AY123223|SESN2|83667|sestrin 2##BC033719|SESN2|83667|sestrin 2##AL136551|SESN2|83667|sestrin 2##AK315710|SESN2|83667|sestrin 2##DQ892827|SESN2|83667|sestrin 2##DQ896073|SESN2|83667|sestrin 2##EU831582|SESN2|83667|sestrin 2##EU831667|SESN2|83667|sestrin 2##NM_001127350|MED18|54797|mediator complex subunit 18##NM_017638|MED18|54797|mediator complex subunit 18##AK296130|MED18|54797|mediator complex subunit 18##AK000052|MED18|54797|mediator complex subunit 18##AB107222|MED18|54797|mediator complex subunit 18##BC002694|MED18|54797|mediator complex subunit 18##NM_001048183|PHACTR4|65979|phosphatase and actin regulator 4##CR749449|PHACTR4|65979|phosphatase and actin regulator 4##AK025436|PHACTR4|65979|phosphatase and actin regulator 4##BC029266|PHACTR4|65979|phosphatase and actin regulator 4##BC016152|PHACTR4|65979|phosphatase and actin regulator 4##BC068508|PHACTR4|65979|phosphatase and actin regulator 4	0.974294	CTCF.p2:-10:0.974
chr1	51807775	51807842	reg1027376.p1	8.188	+	TSC_hg19_v1_chr1_-_51796233 AK301587 AK000220	-11576	-	BC028374 NM_001080494	-19899	-	TSC_hg19_v1_chr1_+_51702013 AK313140 AB024703 AF151881 BC020964 AB385089	-105594	+	AF007170 NM_001144832	2930	-	AK090936 AX746691 AK308128 BX647676 NM_001159969	79958	-	DQ367924 AB384758 BC054006 TSC_hg19_v1_chr1_-_51984939 AK129853 U07707 AK313396	177115	-	AK301587|TTC39A|22996|tetratricopeptide repeat domain 39A##AK000220|TTC39A|22996|tetratricopeptide repeat domain 39A##BC028374|TTC39A|22996|tetratricopeptide repeat domain 39A##NM_001080494|TTC39A|22996|tetratricopeptide repeat domain 39A##AK313140|RNF11|26994|ring finger protein 11##AB024703|RNF11|26994|ring finger protein 11##AF151881|RNF11|26994|ring finger protein 11##BC020964|RNF11|26994|ring finger protein 11##AF007170|TTC39A|22996|tetratricopeptide repeat domain 39A##NM_001144832|TTC39A|22996|tetratricopeptide repeat domain 39A##AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15##BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15##NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15##DQ367924|EPS15|2060|epidermal growth factor receptor pathway substrate 15##BC054006|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK129853|EPS15|2060|epidermal growth factor receptor pathway substrate 15##U07707|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK313396|EPS15|2060|epidermal growth factor receptor pathway substrate 15	0.010993	
chr7	1265286	1265404	reg1017190.p1	8.188	+	TSC_hg19_v1_chr7_+_1200097 AK090593	-65232	+	TSC_hg19_v1_chr7_-_1199853 NM_182491	-65506	-	AK290170 TSC_hg19_v1_chr7_-_1199815	-65531	-	TSC_hg19_v1_chr7_+_1272552 NM_001080461	7257	+	CU691530 EU832111 EU832205 AK074068 BC037988 TSC_hg19_v1_chr7_-_1499102	233688	-	TSC_hg19_v1_chr7_-_1499107 AK027124 NM_182924	233762	-	NM_182491|ZFAND2A|90637|zinc finger, AN1-type domain 2A##AK290170|ZFAND2A|90637|zinc finger, AN1-type domain 2A##NM_001080461|UNCX|340260|UNC homeobox##EU832111|MICALL2|79778|MICAL-like 2##EU832205|MICALL2|79778|MICAL-like 2##AK074068|MICALL2|79778|MICAL-like 2##BC037988|MICALL2|79778|MICAL-like 2##AK027124|MICALL2|79778|MICAL-like 2##NM_182924|MICALL2|79778|MICAL-like 2	0.799052	CTCF.p2:-29:0.799
chr8	89332904	89333026	reg1014947.p1	8.188	+	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	-446706	-	AK093121 AX747937 BC117326 BC117328 NM_173538	-1454292	+	BC150601 AF272900 NM_019098 DQ426865	-1577053	-	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	6781	-	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	1437065	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	1437319	+	BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3##AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3##NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3##AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2	0.0	
chr9	102061955	102062093	reg1018527.p1	8.188	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-77437	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-77781	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-77807	-	TSC_hg19_v1_chr9_-_102582187 AK057451	520141	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	522133	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	606903	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.315427	CTCF.p2:0:0.315
chr9	132369882	132370031	reg1016332.p1	8.188	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	-118515	+	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	-118602	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-286661	+	BC112353 AK093122 AX747938 NM_199350	13081	-	TSC_hg19_v1_chr9_+_132388441 NM_014064 AK290957 AK292332 AK298840 AK307056 AK313829	18469	+	TSC_hg19_v1_chr9_+_132388461 BC001396 BC033234 AF110776	18514	+	BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50##NM_014064|METTL11A|28989|methyltransferase like 11A##AK290957|METTL11A|28989|methyltransferase like 11A##AK292332|METTL11A|28989|methyltransferase like 11A##AK298840|METTL11A|28989|methyltransferase like 11A##AK307056|METTL11A|28989|methyltransferase like 11A##AK313829|METTL11A|28989|methyltransferase like 11A##BC001396|METTL11A|28989|methyltransferase like 11A##BC033234|METTL11A|28989|methyltransferase like 11A##AF110776|METTL11A|28989|methyltransferase like 11A	0.011084	
chr14	91604937	91605050	reg1015510.p1	8.187	+	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-23966	+	AK123532 TSC_hg19_v1_chr14_+_91580717 BC065558 BX248782 AK091394 AK022564	-24244	+	TSC_hg19_v1_chr14_+_91580472 AK023200	-24481	+	BC128536 NM_001177676	105858	-	BC098567 NM_003485	115201	-	TSC_hg19_v1_chr14_-_91884159 AF070587	279155	-	NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AK123532|C14orf159|80017|chromosome 14 open reading frame 159##BC065558|C14orf159|80017|chromosome 14 open reading frame 159##BX248782|C14orf159|80017|chromosome 14 open reading frame 159##AK091394|C14orf159|80017|chromosome 14 open reading frame 159##AK022564|C14orf159|80017|chromosome 14 open reading frame 159##AK023200|C14orf159|80017|chromosome 14 open reading frame 159##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##AF070587|CCDC88C|440193|coiled-coil domain containing 88C	0.985135	CTCF.p2:-11:0.985
chr22	23088282	23088390	reg1016271.p2	8.187	+	TSC_hg19_v1_chr22_+_23063107 M18645 X53070 BC073786 X57805 X57813 AF026926 L35916 L35917 L35918 L35920 U43769 X64165 X64166 X54442	-25205	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	-33454	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	-47818	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	46770	+	TSC_hg19_v1_chr22_+_23154240 L29158 L29159 L29160 L29161 L29164 BC032452 BC089414 AY190827 X57810 L26902	65939	+	X62125 TSC_hg19_v1_chr22_+_23165276 AK129603 BC071804 BC033102 CU689610 L03633 HM996064 HM996172 AF124174 AF194540 AF194541 AF194542 AF194543 AF194544 AF194545 AF194546 AF194547 AF194548 AF194549 AF194550 AF194551 AF194552 AF194553 AF194554 AF194555 AF194556 AF194557 AF194558 AF194559 AF194560 AF194561 AF194562 AF194563 AF194564 AF194565 AF194566 AF194567 AF194568 AF194569 AF194570 AF194571 AF194572 AF194573 AF194574 AF194575 AF194576 AF194577 AJ388658 AJ697911 AM181371 AM183998 AM184000 AM184018 AY685383 AY942038 DQ098709 DQ098711 DQ098766 DQ098772 DQ098775 DQ098778 DQ098782 DQ322816 DQ322984 DQ322992 EF589387 EF589498 EF589544 GU086862 L26532 Y09387 AM184068 DQ098712 DQ098779 AJ399866 AY050712 DQ322899 DQ322900 DQ322979 L21956 S67988 AY950800 U09888 U09892 Y08149 AF103683 AF044486 AY962389 AF092503 AJ408283 DQ098753 Z46858 DQ098738 DQ098739 DQ098762 L38428 DQ098710 AF103704 AF103701 AF103718 AF490954 AF490947 AF103709 AF103640 AF103644 AF103645 AF103647 AF103697 AF103698 AF103700 U87151	77059	+	L35918|IGLJ3|28831|immunoglobulin lambda joining 3##BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3##DQ896079|IGL@|3535|immunoglobulin lambda locus	0.980395	CTCF.p2:0:0.980
chr2	227850129	227850254	reg1014534.p1	8.187	+	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	-149461	+	TSC_hg19_v1_chr2_-_227664534 S62539	-185692	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	-186712	-	TSC_hg19_v1_chr2_-_228028922 X81053	178711	-	NM_000092	179083	-	NM_000091 X80031 TSC_hg19_v1_chr2_+_228029337	179119	+	NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1##S62539|IRS1|3667|insulin receptor substrate 1##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##X81053|COL4A4|1286|collagen, type IV, alpha 4##NM_000092|COL4A4|1286|collagen, type IV, alpha 4##NM_000091|COL4A3|1285|collagen, type IV, alpha 3 (Goodpasture antigen)##X80031|COL4A3|1285|collagen, type IV, alpha 3 (Goodpasture antigen)	0.997581	CTCF.p2:47:0.998
chr3	56481257	56481359	reg1015998.p1	8.187	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-959690	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-959976	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-965900	-	BC111550 BC112391 AB002376 NM_015576	21069	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	109894	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	109938	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.839651	CTCF.p2:15:0.840
chr4	81123413	81123555	reg1016153.p1	8.187	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	-4830	+	AF275815 NM_020226	-17061	+	TSC_hg19_v1_chr4_-_80994394 NM_001145794 NM_058172 BC107876	-129017	-	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	64375	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	133413	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	828658	+	NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##AF275815|PRDM8|56978|PR domain containing 8##NM_020226|PRDM8|56978|PR domain containing 8##NM_001145794|ANTXR2|118429|anthrax toxin receptor 2##NM_058172|ANTXR2|118429|anthrax toxin receptor 2##BC107876|ANTXR2|118429|anthrax toxin receptor 2##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3	0.9603	CTCF.p2:19:0.960
chr1	177915224	177915347	reg1015802.p2	8.186	+	AB051534 AB161694 BC028036 NM_021165	-774704	+	AK296524 TSC_hg19_v1_chr1_+_177140093	-775207	+	TSC_hg19_v1_chr1_-_177134042 AK309094	-781210	-	AB063357 NM_033127 TSC_hg19_v1_chr1_-_177939202	23841	-	BC009106 TSC_hg19_v1_chr1_-_177939393	24085	-	TSC_hg19_v1_chr1_-_178007060 AK092831 BX538051 AB067515	91814	-	AB051534|FAM5B|57795|family with sequence similarity 5, member B##AB161694|FAM5B|57795|family with sequence similarity 5, member B##BC028036|FAM5B|57795|family with sequence similarity 5, member B##NM_021165|FAM5B|57795|family with sequence similarity 5, member B##AK296524|FAM5B|57795|family with sequence similarity 5, member B##AK309094|ASTN1|460|astrotactin 1##AB063357|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##NM_033127|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##BC009106|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AK092831|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##BX538051|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene	0.992626	CTCF.p2:-2:0.993
chr13	32005936	32006050	reg1016381.p1	8.186	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-231783	+	TSC_hg19_v1_chr13_+_31774111 NM_194318	-231890	+	AB003333 TSC_hg19_v1_chr13_-_31736042 BC037553 AB003334 D86956 BC018124 AK314576 AK293955 NM_006644 AK302294 AK303029 AK311464 AK307597	-269890	-	NM_001166058 NM_130806 AF453828 AB527208 AY899851	307720	+	TSC_hg19_v1_chr13_+_32420857 BC021729	414909	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	599448	+	AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB003333|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC037553|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AB003334|HSPH1|10808|heat shock 105kDa/110kDa protein 1##D86956|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC018124|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK314576|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK293955|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_006644|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK302294|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK303029|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK311464|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK307597|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)	1.092781	CTCF.p2:9:0.999
chr1	9781972	9782111	reg1014520.p2	8.186	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	-70237	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-133085	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-182405	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	101854	-	TSC_hg19_v1_chr1_-_9884023 AK304813	101980	-	TSC_hg19_v1_chr1_-_9884024 BC033902	102003	-	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1	1.100443	CTCF.p2:-9:0.996
chr5	78405809	78405914	reg1015016.p1	8.186	+	AF257473 TSC_hg19_v1_chr5_+_78365591 AK298298 AK315520 BC020665 DQ891370 DQ894550 AB590411 CU676622	-40268	+	NM_001178005 NM_017614 TSC_hg19_v1_chr5_+_78365558	-40307	+	TSC_hg19_v1_chr5_-_78365450 AF111858 AK057641 NM_013391 AK300894 AK303873 AK314736	-40412	-	NM_001713 AK298308 AK303780 AK315224 BC012616 U50929 AB590690	1794	+	TSC_hg19_v1_chr5_+_78531933 NM_152405	126030	+	TSC_hg19_v1_chr5_+_78532339 AB590691	126543	+	AF257473|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK298298|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK315520|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##BC020665|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ891370|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ894550|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_001178005|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_017614|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AF111858|DMGDH|29958|dimethylglycine dehydrogenase##AK057641|DMGDH|29958|dimethylglycine dehydrogenase##NM_013391|DMGDH|29958|dimethylglycine dehydrogenase##AK300894|DMGDH|29958|dimethylglycine dehydrogenase##AK303873|DMGDH|29958|dimethylglycine dehydrogenase##AK314736|DMGDH|29958|dimethylglycine dehydrogenase##NM_001713|BHMT|635|betaine--homocysteine S-methyltransferase##AK298308|BHMT|635|betaine--homocysteine S-methyltransferase##AK303780|BHMT|635|betaine--homocysteine S-methyltransferase##AK315224|BHMT|635|betaine--homocysteine S-methyltransferase##BC012616|BHMT|635|betaine--homocysteine S-methyltransferase##U50929|BHMT|635|betaine--homocysteine S-methyltransferase##NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor	0.17903	
chr8	12323994	12324100	reg1015837.p1	8.186	+	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-30143	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-30204	-	DQ012022 NM_001037804 NM_001195257	-148223	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	288957	-	AK296010 NM_020844	479119	+	AB040889 NM_001099677	545725	+	BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456	0.994859	CTCF.p2:2:0.995
chrX	117738005	117738138	reg1016329.p1	8.186	+	AY692226 NM_144658 TSC_hg19_v1_chrX_+_117629874	-108199	+	TSC_hg19_v1_chrX_+_117526665 AL834210	-211384	+	TSC_hg19_v1_chrX_+_117480490 AM393332 AM393787 EU831942 EU832037 AK304432	-257609	+	TSC_hg19_v1_chrX_+_117861562 BC015768 NM_001560 Y10659 U81379 U81380 AK313467 Y09328 BC009960 AB528371 DQ893454 DQ896296 AB209849	123496	+	TSC_hg19_v1_chrX_+_117957786 AK122676 BC036572 BC031241 BC057841 NM_173798 BC018066	219751	+	TSC_hg19_v1_chrX_+_118108580 AK091777 AK290198 AX747177	370509	+	AY692226|DOCK11|139818|dedicator of cytokinesis 11##NM_144658|DOCK11|139818|dedicator of cytokinesis 11##AL834210|WDR44|54521|WD repeat domain 44##AM393332|WDR44|54521|WD repeat domain 44##AM393787|WDR44|54521|WD repeat domain 44##EU831942|WDR44|54521|WD repeat domain 44##EU832037|WDR44|54521|WD repeat domain 44##AK304432|WDR44|54521|WD repeat domain 44##BC015768|IL13RA1|3597|interleukin 13 receptor, alpha 1##NM_001560|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y10659|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81379|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81380|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK313467|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y09328|IL13RA1|3597|interleukin 13 receptor, alpha 1##BC009960|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ893454|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ896296|IL13RA1|3597|interleukin 13 receptor, alpha 1##AB209849|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK122676|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC036572|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC031241|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC057841|ZCCHC12|170261|zinc finger, CCHC domain containing 12##NM_173798|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC018066|ZCCHC12|170261|zinc finger, CCHC domain containing 12##AK091777|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK290198|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3	0.990219	CTCF.p2:-10:0.990
chr1	175726640	175726777	reg1016893.p1	8.185	+	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	-13998	-	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-564678	-	AK127044 NM_022093	-689715	+	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	449457	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	449610	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	449661	-	AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2	0.01147	
chr2	128821117	128821244	reg1016759.p2	8.185	+	TSC_hg19_v1_chr2_-_128785634 AK055979	-35541	-	TSC_hg19_v1_chr2_-_128784881 AL136833 AK315185 NM_001145928 NM_024545	-36287	-	AB385164 AM392550 AM393228 AY220791 BC117255 BC143898 TSC_hg19_v1_chr2_-_128784843	-36391	-	TSC_hg19_v1_chr2_+_128848785 NM_020120 AK293066 AK309101 BC041098	27588	+	TSC_hg19_v1_chr2_+_128848891 AF227905	27681	+	AK074376 TSC_hg19_v1_chr2_+_128928049	106867	+	AK055979|SAP130|79595|Sin3A-associated protein, 130kDa##AL136833|SAP130|79595|Sin3A-associated protein, 130kDa##AK315185|SAP130|79595|Sin3A-associated protein, 130kDa##NM_001145928|SAP130|79595|Sin3A-associated protein, 130kDa##NM_024545|SAP130|79595|Sin3A-associated protein, 130kDa##AM392550|SAP130|79595|Sin3A-associated protein, 130kDa##AM393228|SAP130|79595|Sin3A-associated protein, 130kDa##AY220791|SAP130|79595|Sin3A-associated protein, 130kDa##BC117255|SAP130|79595|Sin3A-associated protein, 130kDa##BC143898|SAP130|79595|Sin3A-associated protein, 130kDa##NM_020120|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AK293066|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AK309101|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##BC041098|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1	0.342185	CTCF.p2:-2:0.332
chr2	153782490	153782632	reg1016039.p1	8.185	+	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-207417	+	BC028741 TSC_hg19_v1_chr2_+_153575133	-207430	+	TSC_hg19_v1_chr2_+_153575123 AK315657	-207446	+	AK311958 BC002908 AK074808 AB043585 NM_019845	552690	-	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	945883	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	1772628	+	BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##BC028741|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK315657|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	0.999784	CTCF.p2:7:1.000
chr17	3747369	3747468	reg1014335.p1	8.184	+	TSC_hg19_v1_chr17_-_3704490 BC113436 BC117207 NM_002208	-42907	-	HQ258689 TSC_hg19_v1_chr17_-_3704463	-42965	-	TSC_hg19_v1_chr17_+_3627210 AK310546 AK315247 BC036181 NM_031965 AK056691 AB039834 AF289865 BC050662 AK292715 BC016626 BC047457	-120202	+	TSC_hg19_v1_chr17_-_3749541 NM_001114118 NM_018553	2092	-	AF425301 NM_172206	46618	-	BC031647 TSC_hg19_v1_chr17_-_3796278 AF425232 BC043487	48873	-	BC113436|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC117207|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_002208|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##HQ258689|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC036181|GSG2|83903|germ cell associated 2 (haspin)##NM_031965|GSG2|83903|germ cell associated 2 (haspin)##AK056691|GSG2|83903|germ cell associated 2 (haspin)##AB039834|GSG2|83903|germ cell associated 2 (haspin)##AF289865|GSG2|83903|germ cell associated 2 (haspin)##BC050662|GSG2|83903|germ cell associated 2 (haspin)##AK292715|GSG2|83903|germ cell associated 2 (haspin)##BC016626|GSG2|83903|germ cell associated 2 (haspin)##BC047457|GSG2|83903|germ cell associated 2 (haspin)##NM_001114118|C17orf85|55421|chromosome 17 open reading frame 85##NM_018553|C17orf85|55421|chromosome 17 open reading frame 85##AF425301|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##NM_172206|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##BC031647|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##AF425232|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha##BC043487|CAMKK1|84254|calcium/calmodulin-dependent protein kinase kinase 1, alpha	0.960962	CTCF.p2:-8:0.961
chr2	220406381	220406533	reg1004552.p1	8.184	+	BC031812 NM_018674 NM_182847 AK308804 BC010439 DQ892104 CU679713 AK309373	-27449	+	TSC_hg19_v1_chr2_+_220363622 NM_013335 AK000999 NM_205847 AK290671 AK022578 AK222951 AK296193 BC007456	-42676	+	NM_001173476	-80924	+	AK302124 NM_001195731	1361	-	TSC_hg19_v1_chr2_+_220408352 BC068567	1911	+	TSC_hg19_v1_chr2_-_220408499 AB086063 BC023531 AB095813 AY358403 BC021223 NM_024536	1943	-	BC031812|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_018674|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_182847|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK308804|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##BC010439|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##DQ892104|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##AK309373|ACCN4|55515|amiloride-sensitive cation channel 4, pituitary##NM_013335|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK000999|GMPPA|29926|GDP-mannose pyrophosphorylase A##NM_205847|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK290671|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK022578|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK222951|GMPPA|29926|GDP-mannose pyrophosphorylase A##AK296193|GMPPA|29926|GDP-mannose pyrophosphorylase A##BC007456|GMPPA|29926|GDP-mannose pyrophosphorylase A##NM_001173476|SPEG|10290|SPEG complex locus##AK302124|CHPF|79586|chondroitin polymerizing factor##NM_001195731|CHPF|79586|chondroitin polymerizing factor##BC068567|TMEM198|130612|transmembrane protein 198##AB086063|CHPF|79586|chondroitin polymerizing factor##BC023531|CHPF|79586|chondroitin polymerizing factor##AB095813|CHPF|79586|chondroitin polymerizing factor##AY358403|CHPF|79586|chondroitin polymerizing factor##BC021223|CHPF|79586|chondroitin polymerizing factor##NM_024536|CHPF|79586|chondroitin polymerizing factor	0.119497	
chr3	48777498	48777604	reg1017070.p1	8.184	+	TSC_hg19_v1_chr3_-_48754622 BC019694 AK291501 AY007091 BC001864 BC065533 BC004469 AK304714 AK315204 AK024045 AK290526 AL137514 BX537544 NM_001005909 NM_001005910 NM_001005911 NM_001146178 NM_001146179 NM_001190316 NM_001190317 NM_016291	-22902	-	AB384897 CU677561 BC016052 BC006255 TSC_hg19_v1_chr3_-_48723349 AF303581 BC026280 AF178432 AJ242655 AY453794 NM_016453 NM_184231	-54256	-	TSC_hg19_v1_chr3_-_48700322 AF231023 NM_001407	-77216	-	BT007225 AB464095 CU678176 TSC_hg19_v1_chr3_-_48885175	107558	-	X14968 TSC_hg19_v1_chr3_-_48885238 AK293042	107684	-	TSC_hg19_v1_chr3_-_48885271 BC002763 NM_004157	107737	-	BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2##AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2##AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2##BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2##BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2##BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2##AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2##AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2##AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2##AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2##AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2##BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2##BC016052|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC006255|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF303581|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC026280|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF178432|NCKIPSD|51517|NCK interacting protein with SH3 domain##AJ242655|NCKIPSD|51517|NCK interacting protein with SH3 domain##AY453794|NCKIPSD|51517|NCK interacting protein with SH3 domain##NM_016453|NCKIPSD|51517|NCK interacting protein with SH3 domain##NM_184231|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF231023|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)##NM_001407|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)##BT007225|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha##X14968|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha##AK293042|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha##BC002763|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha##NM_004157|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha	0.8822	CTCF.p2:-9:0.882
chr12	120639099	120639221	reg1013768.p2	8.183	+	AK001313 AK129823 M17885 TSC_hg19_v1_chr12_-_120638914 NM_001002 NM_053275	-198	-	AK129754 AK222571 AK304674 BC107717 D28418 TSC_hg19_v1_chr12_-_120638911 AK222468 AK291109	-250	-	BC019014 BC000087 TSC_hg19_v1_chr12_-_120638906 BC070194	-259	-	BX648777 NM_025157	48799	-	TSC_hg19_v1_chr12_-_120703534 AK299486 BC136787 BC136794 BC144410 U14588 AB209034 AK298057 AK314204	64354	-	TSC_hg19_v1_chr12_-_120703574 NM_001080855 NM_001243756 NM_002859	64430	-	AK001313|RPLP0|6175|ribosomal protein, large, P0##AK129823|RPLP0|6175|ribosomal protein, large, P0##M17885|RPLP0|6175|ribosomal protein, large, P0##NM_001002|RPLP0|6175|ribosomal protein, large, P0##NM_053275|RPLP0|6175|ribosomal protein, large, P0##AK129754|RPLP0|6175|ribosomal protein, large, P0##AK222571|RPLP0|6175|ribosomal protein, large, P0##AK304674|RPLP0|6175|ribosomal protein, large, P0##BC107717|RPLP0|6175|ribosomal protein, large, P0##D28418|RPLP0|6175|ribosomal protein, large, P0##AK222468|RPLP0|6175|ribosomal protein, large, P0##AK291109|RPLP0|6175|ribosomal protein, large, P0##BC019014|RPLP0|6175|ribosomal protein, large, P0##BC000087|RPLP0|6175|ribosomal protein, large, P0##BC070194|RPLP0|6175|ribosomal protein, large, P0##BX648777|PXN|5829|paxillin##NM_025157|PXN|5829|paxillin##AK299486|PXN|5829|paxillin##BC136787|PXN|5829|paxillin##BC136794|PXN|5829|paxillin##BC144410|PXN|5829|paxillin##U14588|PXN|5829|paxillin##AB209034|PXN|5829|paxillin##AK298057|PXN|5829|paxillin##AK314204|PXN|5829|paxillin##NM_001080855|PXN|5829|paxillin##NM_001243756|PXN|5829|paxillin##NM_002859|PXN|5829|paxillin	1.214646	CTCF.p2:-12:0.997	CTCF.p2:46:0.218
chr15	29382829	29382991	reg1016335.p3	8.183	+	NM_001130414 NM_005503 AF047348 BC082986	-169061	+	TSC_hg19_v1_chr15_+_29077475 BC018626	-305428	+	TSC_hg19_v1_chr15_+_29033278 AK302529	-349587	+	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	179060	-	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	179119	-	NM_015307	480016	-	NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1	0.996472	CTCF.p2:0:0.996
chr3	13503202	13503312	reg1015365.p1	8.183	+	TSC_hg19_v1_chr3_-_13461832 BC020573 NM_024923	-41440	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	-41525	-	AB020713 TSC_hg19_v1_chr3_-_13384784	-118492	-	NM_024827 TSC_hg19_v1_chr3_+_13521806 AK299021 AK025426 AK025890 BC009676 NM_001136041 AK293223	18555	+	AK129883 NM_001004019 NM_001998 TSC_hg19_v1_chr3_+_13590624	87368	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	87406	+	BC020573|NUP210|23225|nucleoporin 210kDa##NM_024923|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa##AB020713|NUP210|23225|nucleoporin 210kDa##NM_024827|HDAC11|79885|histone deacetylase 11##AK299021|HDAC11|79885|histone deacetylase 11##AK025426|HDAC11|79885|histone deacetylase 11##AK025890|HDAC11|79885|histone deacetylase 11##BC009676|HDAC11|79885|histone deacetylase 11##NM_001136041|HDAC11|79885|histone deacetylase 11##AK293223|HDAC11|79885|histone deacetylase 11##AK129883|FBLN2|2199|fibulin 2##NM_001004019|FBLN2|2199|fibulin 2##NM_001998|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2	1.192235	CTCF.p2:17:0.999
chr3	51753265	51753383	reg1017688.p1	8.183	+	NM_000839 NM_001130063 AK315816 AK289984 AK313056 BC041447	-12232	+	NM_001129884 NM_001243727 NM_015926 TSC_hg19_v1_chr3_+_51705247 AK023997 AK222938 AK222949 BC008742 NM_001243725 NM_001243726 AY358972 BC001592	-48058	+	AK122683 NM_015106	-177729	+	NM_001143833	59878	-	BC146874 BC146889 BC171811 BC171818 NM_001085479 NM_001207023	107574	+	AK128883 NM_203424 BC040047 CU691808	142338	+	NM_000839|GRM2|2912|glutamate receptor, metabotropic 2##NM_001130063|GRM2|2912|glutamate receptor, metabotropic 2##AK315816|GRM2|2912|glutamate receptor, metabotropic 2##AK289984|GRM2|2912|glutamate receptor, metabotropic 2##AK313056|GRM2|2912|glutamate receptor, metabotropic 2##BC041447|GRM2|2912|glutamate receptor, metabotropic 2##NM_001129884|TEX264|51368|testis expressed 264##NM_001243727|TEX264|51368|testis expressed 264##NM_015926|TEX264|51368|testis expressed 264##AK023997|TEX264|51368|testis expressed 264##AK222938|TEX264|51368|testis expressed 264##AK222949|TEX264|51368|testis expressed 264##BC008742|TEX264|51368|testis expressed 264##NM_001243725|TEX264|51368|testis expressed 264##NM_001243726|TEX264|51368|testis expressed 264##AY358972|TEX264|51368|testis expressed 264##BC001592|TEX264|51368|testis expressed 264##AK122683|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)##NM_015106|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)##NM_001143833|IQCF6|440956|IQ motif containing F6##BC146874|IQCF3|401067|IQ motif containing F3##BC146889|IQCF3|401067|IQ motif containing F3##BC171811|IQCF3|401067|IQ motif containing F3##BC171818|IQCF3|401067|IQ motif containing F3##NM_001085479|IQCF3|401067|IQ motif containing F3##NM_001207023|IQCF3|401067|IQ motif containing F3##AK128883|IQCF2|389123|IQ motif containing F2##NM_203424|IQCF2|389123|IQ motif containing F2##BC040047|IQCF2|389123|IQ motif containing F2	1.930254	CTCF.p2:-14:1.000	CTCF.p2:30:0.931
chr5	41925261	41925409	reg1018452.p1	8.183	+	TSC_hg19_v1_chr5_+_41904459 BC131721 NM_175921 BX648350	-20858	+	TSC_hg19_v1_chr5_-_41870706 NM_000436	-54589	-	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	-54752	-	AK024075 NM_012176 NM_033484 BC048098 AK001003 BC040011 AF129534 AF176703	51	+	AK000840 TSC_hg19_v1_chr5_-_42175357	250021	-	TSC_hg19_v1_chr5_+_42423913 NM_000163 X06562	498583	+	BC131721|C5orf51|285636|chromosome 5 open reading frame 51##NM_175921|C5orf51|285636|chromosome 5 open reading frame 51##BX648350|C5orf51|285636|chromosome 5 open reading frame 51##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1##BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1##AK024075|FBXO4|26272|F-box protein 4##NM_012176|FBXO4|26272|F-box protein 4##NM_033484|FBXO4|26272|F-box protein 4##BC048098|FBXO4|26272|F-box protein 4##AK001003|FBXO4|26272|F-box protein 4##BC040011|FBXO4|26272|F-box protein 4##AF129534|FBXO4|26272|F-box protein 4##AF176703|FBXO4|26272|F-box protein 4##NM_000163|GHR|2690|growth hormone receptor##X06562|GHR|2690|growth hormone receptor	0.330629	CTCF.p2:0:0.331
chr10	14074527	14074664	reg1016510.p1	8.182	+	TSC_hg19_v1_chr10_-_14050453 AK001072	-24103	-	TSC_hg19_v1_chr10_-_13749648 AK057828	-324906	-	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-445608	+	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	298255	-	TSC_hg19_v1_chr10_-_14646259 BC064407	571722	-	TSC_hg19_v1_chr10_-_14646423 BC072452	571834	-	AK001072|FRMD4A|55691|FERM domain containing 4A##AK057828|FRMD4A|55691|FERM domain containing 4A##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B	1.009984	CTCF.p2:23:1.000
chr15	33287137	33287278	reg1015768.p1	8.182	+	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-276041	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-276950	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	-353293	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	73028	-	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	315962	+	TSC_hg19_v1_chr15_-_34212524 BC037796	925351	-	AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3	0.044732	
chr18	21756850	21756963	reg1014048.p1	8.182	+	NM_138644 AF295037	-37458	+	AK225858 AK301889 TSC_hg19_v1_chr18_+_21719025 AF088868 AF295039 AF329634 AF295038 HQ659768	-37864	+	TSC_hg19_v1_chr18_+_21718937 BC011996 NM_012189 NM_138643 NM_153768 NM_153769 NM_153770 AK313243	-37951	+	AK314552 TSC_hg19_v1_chr18_-_21851656	94745	-	AF392449 BC098384 TSC_hg19_v1_chr18_-_21851882 BC063420	94943	-	TSC_hg19_v1_chr18_-_21851919 AK001079	95005	-	NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK225858|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK301889|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF088868|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF295039|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF329634|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF295038|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##BC011996|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_012189|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_138643|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_153768|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_153769|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_153770|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK313243|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK314552|OSBPL1A|114876|oxysterol binding protein-like 1A##AF392449|OSBPL1A|114876|oxysterol binding protein-like 1A##BC098384|OSBPL1A|114876|oxysterol binding protein-like 1A##BC063420|OSBPL1A|114876|oxysterol binding protein-like 1A##AK001079|OSBPL1A|114876|oxysterol binding protein-like 1A	0.966823	CTCF.p2:-4:0.967
chr1	53651488	53651634	reg1016973.p1	8.181	+	JF917096 CU680222 DQ892299 DQ895498 BC012119 BC017242 AB593061 BC000651 NM_006671 AB593059 AB593060	-43350	-	TSC_hg19_v1_chr1_+_53527884 AY358294 AK314096 AK300847 AK296649 AK299375 AK304599 AY313607 BC030608 NM_001199081 CU688942 BC028292	-123700	+	NM_001199080 NM_001199082 NM_153703 TSC_hg19_v1_chr1_+_53527759	-123820	+	NM_000098 U09648	10539	+	TSC_hg19_v1_chr1_+_53662495 BC002445 BC005172 AK312687 M58581	10935	+	TSC_hg19_v1_chr1_-_53686277 AK000587 BC010908 NM_017887	34713	-	JF917096|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##DQ892299|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##DQ895498|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##BC012119|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##BC017242|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##AB593061|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##BC000651|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##NM_006671|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##AB593059|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##AB593060|SLC1A7|6512|solute carrier family 1 (glutamate transporter), member 7##AY358294|PODN|127435|podocan##AK314096|PODN|127435|podocan##AK300847|PODN|127435|podocan##AK296649|PODN|127435|podocan##AK299375|PODN|127435|podocan##AK304599|PODN|127435|podocan##AY313607|PODN|127435|podocan##BC030608|PODN|127435|podocan##NM_001199081|PODN|127435|podocan##BC028292|PODN|127435|podocan##NM_001199080|PODN|127435|podocan##NM_001199082|PODN|127435|podocan##NM_153703|PODN|127435|podocan##NM_000098|CPT2|1376|carnitine palmitoyltransferase 2##U09648|CPT2|1376|carnitine palmitoyltransferase 2##BC002445|CPT2|1376|carnitine palmitoyltransferase 2##BC005172|CPT2|1376|carnitine palmitoyltransferase 2##AK312687|CPT2|1376|carnitine palmitoyltransferase 2##M58581|CPT2|1376|carnitine palmitoyltransferase 2##AK000587|C1orf123|54987|chromosome 1 open reading frame 123##BC010908|C1orf123|54987|chromosome 1 open reading frame 123##NM_017887|C1orf123|54987|chromosome 1 open reading frame 123	0.694153	CTCF.p2:12:0.694
chr4	111132538	111132680	reg1018240.p1	8.181	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	-12824	-	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-298562	+	AK126648 NM_198506	-360124	+	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	264764	+	AK313987 TSC_hg19_v1_chr4_-_111543909	411301	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	411666	-	BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK126648|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_198506|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313987|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2	0.0	
chr13	95087993	95088122	reg1018836.p1	8.180	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	-1208630	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-3037153	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-6763188	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	43769	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	160372	-	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	160439	-	NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase	0.086401	
chr16	863811	863902	reg1013933.p1	8.180	+	NM_001013638	-8414	+	AB030207 AY029486 AK312139 NM_016541	-13141	-	BC006437 BC018184 TSC_hg19_v1_chr16_+_838661 BC006278	-25193	+	TSC_hg19_v1_chr16_-_1020964 AK025955 AK093050 AK294932 AB075873 AK225406	157031	-	AK022743 AK225065 AK294329 TSC_hg19_v1_chr16_-_1020985 NM_022773	157167	-	BC031797 NM_014587 TSC_hg19_v1_chr16_+_1031808 AB464249 AF226675	168008	+	NM_001013638|PRR25|388199|proline rich 25##AB030207|GNG13|51764|guanine nucleotide binding protein (G protein), gamma 13##AY029486|GNG13|51764|guanine nucleotide binding protein (G protein), gamma 13##AK312139|GNG13|51764|guanine nucleotide binding protein (G protein), gamma 13##NM_016541|GNG13|51764|guanine nucleotide binding protein (G protein), gamma 13##BC006437|CHTF18|63922|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)##BC018184|CHTF18|63922|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)##BC006278|CHTF18|63922|CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae)##AK025955|LMF1|64788|lipase maturation factor 1##AK093050|LMF1|64788|lipase maturation factor 1##AK294932|LMF1|64788|lipase maturation factor 1##AB075873|LMF1|64788|lipase maturation factor 1##AK225406|LMF1|64788|lipase maturation factor 1##AK022743|LMF1|64788|lipase maturation factor 1##AK225065|LMF1|64788|lipase maturation factor 1##AK294329|LMF1|64788|lipase maturation factor 1##NM_022773|LMF1|64788|lipase maturation factor 1##BC031797|SOX8|30812|SRY (sex determining region Y)-box 8##NM_014587|SOX8|30812|SRY (sex determining region Y)-box 8##AF226675|SOX8|30812|SRY (sex determining region Y)-box 8	0.852555	CTCF.p2:-17:0.853
chr19	48606461	48606574	reg1016638.p1	8.180	+	HQ258076 BC126133 BC126135 AF169159 NM_019855	-59272	-	AF279147 NM_022142 BC015598	-108592	+	AB590993 DQ227497 NM_001128326	-111135	-	AF058921 BC017956 AK022440 TSC_hg19_v1_chr19_-_48614075 AF065214 BC063416 AK314524 AK295400 NM_001159322 NM_001159323 NM_003706	7543	-	M36067 NM_000234 TSC_hg19_v1_chr19_-_48673602 AK314210 AK297296 AK303644 AB208791 AK225863 AK300370	67064	-	TSC_hg19_v1_chr19_+_48673949 BC043386	67436	+	HQ258076|CABP5|56344|calcium binding protein 5##BC126133|CABP5|56344|calcium binding protein 5##BC126135|CABP5|56344|calcium binding protein 5##AF169159|CABP5|56344|calcium binding protein 5##NM_019855|CABP5|56344|calcium binding protein 5##AF279147|ELSPBP1|64100|epididymal sperm binding protein 1##NM_022142|ELSPBP1|64100|epididymal sperm binding protein 1##BC015598|ELSPBP1|64100|epididymal sperm binding protein 1##DQ227497|BSPH1|100131137|binder of sperm protein homolog 1##NM_001128326|BSPH1|100131137|binder of sperm protein homolog 1##AF058921|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC017956|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK022440|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AF065214|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC063416|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK314524|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK295400|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159322|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159323|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_003706|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##M36067|LIG1|3978|ligase I, DNA, ATP-dependent##NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent##AK314210|LIG1|3978|ligase I, DNA, ATP-dependent##AK297296|LIG1|3978|ligase I, DNA, ATP-dependent##AK303644|LIG1|3978|ligase I, DNA, ATP-dependent##AB208791|LIG1|3978|ligase I, DNA, ATP-dependent##AK225863|LIG1|3978|ligase I, DNA, ATP-dependent##AK300370|LIG1|3978|ligase I, DNA, ATP-dependent##BC043386|C19orf68|374920|chromosome 19 open reading frame 68	0.915446	CTCF.p2:-9:0.915
chr3	195285476	195285603	reg1018920.p1	8.180	+	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	-15426	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	-121837	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	-293689	-	TSC_hg19_v1_chr3_-_195306274 BT019860 BT019861 CR456838 CR541773 CU675645 DQ892668 DQ896124	20763	-	J02611 BC007402 TSC_hg19_v1_chr3_-_195310812 AK312090 AK294523	25291	-	TSC_hg19_v1_chr3_-_195310989 NM_001647	25491	-	BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##BT019860|APOD|347|apolipoprotein D##BT019861|APOD|347|apolipoprotein D##CR456838|APOD|347|apolipoprotein D##CR541773|APOD|347|apolipoprotein D##DQ892668|APOD|347|apolipoprotein D##DQ896124|APOD|347|apolipoprotein D##J02611|APOD|347|apolipoprotein D##BC007402|APOD|347|apolipoprotein D##AK312090|APOD|347|apolipoprotein D##AK294523|APOD|347|apolipoprotein D##NM_001647|APOD|347|apolipoprotein D	0.281141	CTCF.p2:0:0.281
chr11	5391232	5391337	reg1016537.p1	8.179	+	AB463972 NM_001004750	-18547	+	HQ258158 BC117461 NM_033180	-45729	-	BC100919 BC069094 BC148186 BC153815 NM_033179	-68110	-	BC136912 BC136913 NM_001004756	19322	+	BC136999 NM_001004757	52056	+	BC151148 NM_001005288	71498	-	NM_001004750|OR51B6|390058|olfactory receptor, family 51, subfamily B, member 6##HQ258158|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2##BC117461|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2##NM_033180|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2##BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC136912|OR51M1|390059|olfactory receptor, family 51, subfamily M, member 1##BC136913|OR51M1|390059|olfactory receptor, family 51, subfamily M, member 1##NM_001004756|OR51M1|390059|olfactory receptor, family 51, subfamily M, member 1##BC136999|OR51Q1|390061|olfactory receptor, family 51, subfamily Q, member 1##NM_001004757|OR51Q1|390061|olfactory receptor, family 51, subfamily Q, member 1##BC151148|OR51I1|390063|olfactory receptor, family 51, subfamily I, member 1##NM_001005288|OR51I1|390063|olfactory receptor, family 51, subfamily I, member 1	0.09248	
chr2	233191935	233192054	reg1017165.p2	8.179	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-365634	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	-400961	-	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-540878	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	51389	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	79582	+	AK313163 NM_001631 BC132678 M31008 M15694	128876	+	AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal	0.996231	CTCF.p2:-2:0.996
chr2	54884845	54884979	reg1016885.p1	8.179	+	TSC_hg19_v1_chr2_+_54785519 AF327441 NM_178313 BC137282 BC137283	-99347	+	TSC_hg19_v1_chr2_+_54684338 BC032061	-200545	+	TSC_hg19_v1_chr2_+_54683463 NM_003128 AB371586 AB209748	-201300	+	NM_001039753	67236	+	TSC_hg19_v1_chr2_-_55199899 BC131571	314996	-	AJ251385 AM392753 AM393122 AM393280 AM393537 BC139928 DQ778739 AF087901 BC014366 TSC_hg19_v1_chr2_-_55237387 BC007109 AF177332 AF132048 BC001035 AF077050 AF125103 NM_007008 AY102276	352460	-	AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_001039753|EML6|400954|echinoderm microtubule associated protein like 6##AJ251385|RTN4|57142|reticulon 4##AM392753|RTN4|57142|reticulon 4##AM393122|RTN4|57142|reticulon 4##AM393280|RTN4|57142|reticulon 4##AM393537|RTN4|57142|reticulon 4##BC139928|RTN4|57142|reticulon 4##DQ778739|RTN4|57142|reticulon 4##AF087901|RTN4|57142|reticulon 4##BC014366|RTN4|57142|reticulon 4##BC007109|RTN4|57142|reticulon 4##AF177332|RTN4|57142|reticulon 4##AF132048|RTN4|57142|reticulon 4##BC001035|RTN4|57142|reticulon 4##AF077050|RTN4|57142|reticulon 4##AF125103|RTN4|57142|reticulon 4##NM_007008|RTN4|57142|reticulon 4##AY102276|RTN4|57142|reticulon 4	1.100395	CTCF.p2:-9:0.993
chr3	124278823	124278915	reg1016823.p1	8.179	+	TSC_hg19_v1_chr3_+_124103674 AK131379	-175246	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-465264	+	AF303889 NM_017578	-568671	-	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	24659	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	170370	+	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	170447	+	AK131379|KALRN|8997|kalirin, RhoGEF kinase##AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase##AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase	0.998008	CTCF.p2:9:0.998
chr8	133204404	133204541	reg1017325.p2	8.179	+	NM_001145095	-86961	-	AK297911 NM_001080399	-132846	-	BX648595 TSC_hg19_v1_chr8_+_132991247	-213263	+	AK296293 NM_001204824	255036	-	AB208890 AF033347 TSC_hg19_v1_chr8_-_133492689	288151	-	TSC_hg19_v1_chr8_-_133492751 AB527350 BC128576	288315	-	NM_001145095|HHLA1|10086|HERV-H LTR-associating 1##AK297911|OC90|729330|otoconin 90##NM_001080399|OC90|729330|otoconin 90##BX648595|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##AK296293|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##NM_001204824|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3	0.998963	CTCF.p2:-25:0.999
chr17	27918774	27918882	reg1015132.p1	8.178	+	TSC_hg19_v1_chr17_-_27916646 AK294785 BC048196	-2173	-	TSC_hg19_v1_chr17_-_27916606 BC067358 NM_001085454 NM_014030	-2222	-	AB384970 AF124490 AB209537 AK299932 TSC_hg19_v1_chr17_-_27916543	-2358	-	TSC_hg19_v1_chr17_+_27920483 NM_152345	1674	+	AK096431 NM_032854	29564	-	BC028205 TSC_hg19_v1_chr17_-_27949878 AL833952	31023	-	AK294785|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC048196|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC067358|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_001085454|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_014030|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AF124490|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AB209537|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AK299932|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B##AK096431|CORO6|84940|coronin 6##NM_032854|CORO6|84940|coronin 6##BC028205|CORO6|84940|coronin 6##AL833952|CORO6|84940|coronin 6	0.972165	CTCF.p2:10:0.972
chr3	194125506	194125612	reg1013135.p1	8.178	+	NM_004488	-5565	-	BC101064 BC101065 TSC_hg19_v1_chr3_-_194090471 AK125112 NM_001135057 NM_130830	-35092	-	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	-53485	-	NM_024524	63408	-	TSC_hg19_v1_chr3_+_194207865 AK091527	82243	+	TSC_hg19_v1_chr3_+_194304750 AK124168	179174	+	NM_004488|GP5|2814|glycoprotein V (platelet)##BC101064|LRRC15|131578|leucine rich repeat containing 15##BC101065|LRRC15|131578|leucine rich repeat containing 15##AK125112|LRRC15|131578|leucine rich repeat containing 15##NM_001135057|LRRC15|131578|leucine rich repeat containing 15##NM_130830|LRRC15|131578|leucine rich repeat containing 15##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_024524|ATP13A3|79572|ATPase type 13A3##AK091527|FLJ34208|401106|uncharacterized LOC401106	0.839956	CTCF.p2:8:0.840
chr4	122871460	122871595	reg1017741.p1	8.178	+	AB255423 AB255424 BC093682 BC093684 BC143239 NM_003305	-17298	-	AB528453 CU689486 DQ890888 DQ896810 BC032691 AF521643 AF521644 AK001577 AK309803 AK308076 NM_018190 NM_176824	-79968	-	TSC_hg19_v1_chr4_-_122745039 BC021067 AK291931 NM_001237	-126486	-	AY865574 NM_001130698	1381	-	DQ335469 NM_015312	220230	+	CR936613 TSC_hg19_v1_chr4_+_123161129	289597	+	AB255423|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##AB255424|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##BC093682|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##BC093684|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##BC143239|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##NM_003305|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##DQ890888|BBS7|55212|Bardet-Biedl syndrome 7##DQ896810|BBS7|55212|Bardet-Biedl syndrome 7##BC032691|BBS7|55212|Bardet-Biedl syndrome 7##AF521643|BBS7|55212|Bardet-Biedl syndrome 7##AF521644|BBS7|55212|Bardet-Biedl syndrome 7##AK001577|BBS7|55212|Bardet-Biedl syndrome 7##AK309803|BBS7|55212|Bardet-Biedl syndrome 7##AK308076|BBS7|55212|Bardet-Biedl syndrome 7##NM_018190|BBS7|55212|Bardet-Biedl syndrome 7##NM_176824|BBS7|55212|Bardet-Biedl syndrome 7##AK291931|CCNA2|890|cyclin A2##NM_001237|CCNA2|890|cyclin A2##AY865574|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##NM_001130698|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##DQ335469|KIAA1109|84162|KIAA1109##NM_015312|KIAA1109|84162|KIAA1109##CR936613|KIAA1109|84162|KIAA1109	0.901563	CTCF.p2:-17:0.902
chr13	45045224	45045331	reg1016341.p1	8.177	+	NM_001243797	-33888	-	NM_006022 TSC_hg19_v1_chr13_-_45011118	-34188	-	AK290751 TSC_hg19_v1_chr13_-_45010994	-34283	-	NM_001243798	3159	-	AK091854 AX747223 TSC_hg19_v1_chr13_-_45150467 BC136475 BC136482	105153	-	TSC_hg19_v1_chr13_-_45150604 AB082525 NM_001243799 NM_183422	105373	-	NM_001243797|TSC22D1|8848|TSC22 domain family, member 1##NM_006022|TSC22D1|8848|TSC22 domain family, member 1##AK290751|TSC22D1|8848|TSC22 domain family, member 1##NM_001243798|TSC22D1|8848|TSC22 domain family, member 1##AK091854|TSC22D1|8848|TSC22 domain family, member 1##BC136475|TSC22D1|8848|TSC22 domain family, member 1##BC136482|TSC22D1|8848|TSC22 domain family, member 1##AB082525|TSC22D1|8848|TSC22 domain family, member 1##NM_001243799|TSC22D1|8848|TSC22 domain family, member 1##NM_183422|TSC22D1|8848|TSC22 domain family, member 1	0.983963	CTCF.p2:17:0.984
chr17	28563970	28564082	reg1016273.p1	8.177	+	NM_001045	-1073	-	TSC_hg19_v1_chr17_+_28443846 AK297102 AL136806 NM_032141 AK094552 BC062425 AK313963 BC105044 BC105046 BC143417 BC143539 BC046116 BC040118 AF161358 BC016313 AB462988 AM392705 AM392719 CR533555	-120185	+	NM_198529 BX648689 BC137519	-295322	+	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	54933	-	NM_000386 TSC_hg19_v1_chr17_-_28619220	55177	-	AK290266 BC137201 BC137202 AY358153 NM_206832 AK172838	97036	-	NM_001045|SLC6A4|6532|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4##AK297102|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AL136806|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_032141|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK094552|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC062425|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK313963|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105044|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105046|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143417|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143539|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC046116|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC040118|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AF161358|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC016313|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392705|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392719|NSRP1|84081|nuclear speckle splicing regulatory protein 1##CR533555|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase##NM_000386|BLMH|642|bleomycin hydrolase##AK290266|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##BC137201|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##BC137202|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##AY358153|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##NM_206832|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##AK172838|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1	0.528039	CTCF.p2:37:0.511
chr10	70982066	70982246	reg1016897.p1	8.176	+	AK095086 NM_025130 BC110505 BC110504 TSC_hg19_v1_chr10_+_70980087 AK291024 BC069201	-2075	+	TSC_hg19_v1_chr10_+_70940005 BC036112 NM_003171 AK290416 AK299670 AF042169 CU690300 DQ891004 DQ894183	-42141	+	BX647725 TSC_hg19_v1_chr10_+_70883987 AK290536	-98156	+	NM_033497 NM_033498 NM_033500 U38226 U38227 U38228 AK128226	47601	+	NM_033496	93453	+	TSC_hg19_v1_chr10_+_71078602 AK292012 NM_000188 AK294428 AB209526 M75126	96443	+	AK095086|HKDC1|80201|hexokinase domain containing 1##NM_025130|HKDC1|80201|hexokinase domain containing 1##BC110505|HKDC1|80201|hexokinase domain containing 1##BC110504|HKDC1|80201|hexokinase domain containing 1##AK291024|HKDC1|80201|hexokinase domain containing 1##BC069201|HKDC1|80201|hexokinase domain containing 1##BC036112|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##NM_003171|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##AK290416|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##AK299670|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##AF042169|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##DQ891004|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##DQ894183|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##BX647725|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK290536|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_033497|HK1|3098|hexokinase 1##NM_033498|HK1|3098|hexokinase 1##NM_033500|HK1|3098|hexokinase 1##U38226|HK1|3098|hexokinase 1##U38227|HK1|3098|hexokinase 1##U38228|HK1|3098|hexokinase 1##AK128226|HK1|3098|hexokinase 1##NM_033496|HK1|3098|hexokinase 1##AK292012|HK1|3098|hexokinase 1##NM_000188|HK1|3098|hexokinase 1##AK294428|HK1|3098|hexokinase 1##AB209526|HK1|3098|hexokinase 1##M75126|HK1|3098|hexokinase 1	0.96979	CTCF.p2:-8:0.970
chr17	73066057	73066159	reg1014900.p2	8.176	+	TSC_hg19_v1_chr17_+_73043325 D79998	-22775	+	TSC_hg19_v1_chr17_+_73043288 BC033329 NM_015353	-22879	+	BC032245 TSC_hg19_v1_chr17_-_73043079	-23029	-	TSC_hg19_v1_chr17_+_73084056 BC009684 NM_004695	17947	+	TSC_hg19_v1_chr17_+_73106069 AK300997 AK310697 BC011728 NM_024585	39946	+	TSC_hg19_v1_chr17_-_73127869 CU692564 BC002516 BC022334 BC008183 BC047763 BC017454 AF154829 AK000419 NM_001252377 NM_014595	61749	-	D79998|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC033329|KCTD2|23510|potassium channel tetramerisation domain containing 2##NM_015353|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC032245|ATP5H|10476|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d##BC009684|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##NM_004695|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##AK300997|ARMC7|79637|armadillo repeat containing 7##BC011728|ARMC7|79637|armadillo repeat containing 7##NM_024585|ARMC7|79637|armadillo repeat containing 7##BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic##AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic	0.0	
chr11	133968617	133968719	reg1015679.p1	8.175	+	AK075309 AK125071 AK225666 TSC_hg19_v1_chr11_+_133938965 BC057284 AJ344431 AF356518 BC012147 BC010690	-29696	+	AJ416101 NM_001205329 NM_032801 AY358335 TSC_hg19_v1_chr11_+_133938938 AK074769 AF448478	-29787	+	NM_014987 TSC_hg19_v1_chr11_-_133826886	-141786	-	TSC_hg19_v1_chr11_-_134093862 D29954	125178	-	TSC_hg19_v1_chr11_-_134093881 BC098398	125213	-	TSC_hg19_v1_chr11_-_134094442 AK124878 NM_015261	125774	-	AK075309|JAM3|83700|junctional adhesion molecule 3##AK125071|JAM3|83700|junctional adhesion molecule 3##AK225666|JAM3|83700|junctional adhesion molecule 3##BC057284|JAM3|83700|junctional adhesion molecule 3##AJ344431|JAM3|83700|junctional adhesion molecule 3##AF356518|JAM3|83700|junctional adhesion molecule 3##BC012147|JAM3|83700|junctional adhesion molecule 3##BC010690|JAM3|83700|junctional adhesion molecule 3##AJ416101|JAM3|83700|junctional adhesion molecule 3##NM_001205329|JAM3|83700|junctional adhesion molecule 3##NM_032801|JAM3|83700|junctional adhesion molecule 3##AY358335|JAM3|83700|junctional adhesion molecule 3##AK074769|JAM3|83700|junctional adhesion molecule 3##AF448478|JAM3|83700|junctional adhesion molecule 3##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B##D29954|NCAPD3|23310|non-SMC condensin II complex, subunit D3##BC098398|NCAPD3|23310|non-SMC condensin II complex, subunit D3##AK124878|NCAPD3|23310|non-SMC condensin II complex, subunit D3##NM_015261|NCAPD3|23310|non-SMC condensin II complex, subunit D3	0.491779	CTCF.p2:1:0.478
chr12	123345105	123345258	reg1000016.p2	8.175	+	TSC_hg19_v1_chr12_+_123320050 AK298387 BC067085 NM_003959 AB014555	-25128	+	TSC_hg19_v1_chr12_+_123319294 AK090537	-25879	+	NM_201435 TSC_hg19_v1_chr12_+_123259079 BC060796 AY254201 AK097663 AK292466	-86080	+	CU675175 TSC_hg19_v1_chr12_-_123380621	35434	-	TSC_hg19_v1_chr12_-_123380645 BC005882	35458	-	TSC_hg19_v1_chr12_-_123380691 AK022812 NM_024667	35515	-	AK298387|HIP1R|9026|huntingtin interacting protein 1 related##BC067085|HIP1R|9026|huntingtin interacting protein 1 related##NM_003959|HIP1R|9026|huntingtin interacting protein 1 related##AB014555|HIP1R|9026|huntingtin interacting protein 1 related##AK090537|HIP1R|9026|huntingtin interacting protein 1 related##NM_201435|CCDC62|84660|coiled-coil domain containing 62##BC060796|CCDC62|84660|coiled-coil domain containing 62##AY254201|CCDC62|84660|coiled-coil domain containing 62##AK097663|CCDC62|84660|coiled-coil domain containing 62##AK292466|CCDC62|84660|coiled-coil domain containing 62##BC005882|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)##AK022812|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)##NM_024667|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)	0.0	
chr15	98628382	98628522	reg1017273.p2	8.175	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	-124501	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	-124533	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	-1301780	+	AK097062 AK097062 NM_182562	429158	-	TSC_hg19_v1_chr15_+_99191767 AB425196	563519	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	564304	+	BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor	0.9983	CTCF.p2:-8:0.998
chr4	89300488	89300668	reg1006580.p2	8.175	+	TSC_hg19_v1_chr4_+_89300147 AK092403 AX747525 BX647121	-412	+	AK295832 TSC_hg19_v1_chr4_+_89300006 BC042047	-581	+	TSC_hg19_v1_chr4_+_89299890 AF336798 AY653201 AY653202 AY653203 NM_001165136 NM_017912	-696	+	TSC_hg19_v1_chr4_+_89378269 AY337518 NM_016323 AB027289 BC140716	77744	+	TSC_hg19_v1_chr4_-_89444916 AB206972 BC007876 AK312082	144343	-	TSC_hg19_v1_chr4_-_89444931 NM_001042616 NM_032906	144374	-	AK092403|HERC6|55008|hect domain and RLD 6##BX647121|HERC6|55008|hect domain and RLD 6##AK295832|HERC6|55008|hect domain and RLD 6##BC042047|HERC6|55008|hect domain and RLD 6##AF336798|HERC6|55008|hect domain and RLD 6##AY653201|HERC6|55008|hect domain and RLD 6##AY653202|HERC6|55008|hect domain and RLD 6##AY653203|HERC6|55008|hect domain and RLD 6##NM_001165136|HERC6|55008|hect domain and RLD 6##NM_017912|HERC6|55008|hect domain and RLD 6##AY337518|HERC5|51191|hect domain and RLD 5##NM_016323|HERC5|51191|hect domain and RLD 5##AB027289|HERC5|51191|hect domain and RLD 5##BC140716|HERC5|51191|hect domain and RLD 5##AB206972|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##BC007876|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AK312082|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_001042616|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_032906|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y	0.0	
chr11	35185372	35185510	reg1016739.p2	8.174	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-24581	+	TSC_hg19_v1_chr11_+_35160821 M59040	-24623	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	-24707	+	TSC_hg19_v1_chr11_+_35198199 AK129808	12771	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	93384	-	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	255270	-	AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##AK129808|CD44|960|CD44 molecule (Indian blood group)##CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.460761	CTCF.p2:3:0.461
chr18	61343895	61344013	reg1017040.p2	8.174	+	S66896 AB046399 AK222746 AK222753 AK308383 AK310948 AK314805 BC005224 BC008483 AK307261 NM_006919	-14800	-	U19557 BC008399 BC017401 NM_002974 AK292212	-32446	-	NM_012397 AK290323 AK313486 AK296797 AK303867 AK303979 AJ001696 AJ001697 AK298049 BC101821 BC143402 AJ001698	-89357	+	AK292775 AK296705 AK309537 AK309970 NM_080475	26239	+	NM_001040147 D88575	76337	+	NM_003784 AF027866 AK300828 BC069417 BC069442 BC069547 AK290876 BC106743 BC106744	98725	+	S66896|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AB046399|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK222746|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK222753|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK308383|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK310948|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK314805|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##BC005224|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##BC008483|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##NM_006919|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##U19557|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##BC008399|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##BC017401|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##NM_002974|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##AK292212|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##NM_012397|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK290323|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK313486|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK296797|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK303867|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK303979|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AJ001696|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AJ001697|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK298049|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##BC101821|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##BC143402|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AJ001698|SERPINB13|5275|serpin peptidase inhibitor, clade B (ovalbumin), member 13##AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##NM_001040147|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##D88575|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##NM_003784|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AF027866|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK300828|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069417|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069442|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069547|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK290876|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106743|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106744|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7	0.0	
chr7	50159537	50159658	reg1016957.p1	8.174	+	NM_001161834	-23916	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	-26773	-	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-346327	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	184756	+	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	188722	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	358457	-	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1	0.834227	CTCF.p2:4:0.834
chr11	58053872	58054010	reg1016737.p2	8.173	+	BC132848 BC132850 AY358251 NM_207374	-18261	-	AB529284 BC140731 NM_001004471	-57573	-	NM_001004458	-71725	+	NM_001005489	72600	-	NM_001005469	116940	-	BC136923 BC136922 NM_001005566	136842	-	BC132848|OR10W1|81341|olfactory receptor, family 10, subfamily W, member 1##BC132850|OR10W1|81341|olfactory receptor, family 10, subfamily W, member 1##AY358251|OR10W1|81341|olfactory receptor, family 10, subfamily W, member 1##NM_207374|OR10W1|81341|olfactory receptor, family 10, subfamily W, member 1##BC140731|OR10Q1|219960|olfactory receptor, family 10, subfamily Q, member 1##NM_001004471|OR10Q1|219960|olfactory receptor, family 10, subfamily Q, member 1##NM_001004458|OR1S1|219959|olfactory receptor, family 1, subfamily S, member 1##NM_001005489|OR5B17|219965|olfactory receptor, family 5, subfamily B, member 17##NM_001005469|OR5B3|441608|olfactory receptor, family 5, subfamily B, member 3##BC136923|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2##BC136922|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2##NM_001005566|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2	0.671828	CTCF.p2:-7:0.672
chr15	42426238	42426366	reg1016879.p1	8.173	+	AB527201 AB090876 NM_178034	-39598	-	NM_001206670	-83402	-	AK074621 AK292634 TSC_hg19_v1_chr15_-_42264753 AK024902 NM_139265	-161549	-	BC111481 BC035335 AK122623 BC142682 BC146648 BC131531 AK304368 AK172836 NM_213600	22501	-	TSC_hg19_v1_chr15_-_42500479 AF280814 CU686671 AM392538 AM393769 AB018313	74105	-	TSC_hg19_v1_chr15_-_42500503 BC068559 AF281052 BX537404 NM_015289	74217	-	AB090876|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##NM_178034|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##NM_001206670|PLA2G4E|123745|phospholipase A2, group IVE##AK074621|EHD4|30844|EH-domain containing 4##AK292634|EHD4|30844|EH-domain containing 4##AK024902|EHD4|30844|EH-domain containing 4##NM_139265|EHD4|30844|EH-domain containing 4##BC111481|PLA2G4F|255189|phospholipase A2, group IVF##BC035335|PLA2G4F|255189|phospholipase A2, group IVF##AK122623|PLA2G4F|255189|phospholipase A2, group IVF##BC142682|PLA2G4F|255189|phospholipase A2, group IVF##BC146648|PLA2G4F|255189|phospholipase A2, group IVF##BC131531|PLA2G4F|255189|phospholipase A2, group IVF##AK304368|PLA2G4F|255189|phospholipase A2, group IVF##AK172836|PLA2G4F|255189|phospholipase A2, group IVF##NM_213600|PLA2G4F|255189|phospholipase A2, group IVF##AF280814|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AM392538|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AM393769|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AB018313|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##BC068559|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AF281052|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##BX537404|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##NM_015289|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)	0.998582	CTCF.p2:-6:0.999
chr1	17662730	17662840	reg1015261.p1	8.172	+	AF229067 AK314839 NM_012387 AB017919 AK290507 AK309637 BC025718 AB527709 CU693030	-28082	+	AB026831 NM_016233 BC109091 BC041592 BC109092	-87186	+	AK314644 AK026652 AK225541 NM_013358 AB033768 BC130574 BC136402 HQ258487	-131120	+	AY443100 AB527380 AY422079 NM_207421	35930	+	BC142946 TSC_hg19_v1_chr1_-_17764885	102077	-	TSC_hg19_v1_chr1_-_17765031 AB384219 BC042141	102225	-	AF229067|PADI4|23569|peptidyl arginine deiminase, type IV##AK314839|PADI4|23569|peptidyl arginine deiminase, type IV##NM_012387|PADI4|23569|peptidyl arginine deiminase, type IV##AB017919|PADI4|23569|peptidyl arginine deiminase, type IV##AK290507|PADI4|23569|peptidyl arginine deiminase, type IV##AK309637|PADI4|23569|peptidyl arginine deiminase, type IV##BC025718|PADI4|23569|peptidyl arginine deiminase, type IV##AB026831|PADI3|51702|peptidyl arginine deiminase, type III##NM_016233|PADI3|51702|peptidyl arginine deiminase, type III##BC109091|PADI3|51702|peptidyl arginine deiminase, type III##BC041592|PADI3|51702|peptidyl arginine deiminase, type III##BC109092|PADI3|51702|peptidyl arginine deiminase, type III##AK314644|PADI1|29943|peptidyl arginine deiminase, type I##AK026652|PADI1|29943|peptidyl arginine deiminase, type I##AK225541|PADI1|29943|peptidyl arginine deiminase, type I##NM_013358|PADI1|29943|peptidyl arginine deiminase, type I##AB033768|PADI1|29943|peptidyl arginine deiminase, type I##BC130574|PADI1|29943|peptidyl arginine deiminase, type I##BC136402|PADI1|29943|peptidyl arginine deiminase, type I##HQ258487|PADI1|29943|peptidyl arginine deiminase, type I##AY443100|PADI6|353238|peptidyl arginine deiminase, type VI##AY422079|PADI6|353238|peptidyl arginine deiminase, type VI##NM_207421|PADI6|353238|peptidyl arginine deiminase, type VI##BC142946|RCC2|55920|regulator of chromosome condensation 2##BC042141|RCC2|55920|regulator of chromosome condensation 2	0.998316	CTCF.p2:-5:0.998
chr22	31952723	31952877	reg1018150.p1	8.172	+	TSC_hg19_v1_chr22_+_31892521 BC110814 AK292408 BC041101	-60254	+	BC129926 BC129945 TSC_hg19_v1_chr22_+_31892499 AK303362 AK293987	-60359	+	TSC_hg19_v1_chr22_+_31892148 AB011114 NM_001007467 NM_014775	-60628	+	BC033613 TSC_hg19_v1_chr22_+_32010180	57366	+	TSC_hg19_v1_chr22_-_32026821 BC001482 NM_014338	74032	-	TSC_hg19_v1_chr22_-_32058202 AB528208 CU013140 CU013428 CR456540 DQ656048	105408	-	BC110814|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK292408|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC041101|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC129926|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC129945|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK303362|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK293987|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AB011114|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##NM_001007467|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##NM_014775|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC033613|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC001482|PISD|23761|phosphatidylserine decarboxylase##NM_014338|PISD|23761|phosphatidylserine decarboxylase##CU013140|PISD|23761|phosphatidylserine decarboxylase##CU013428|PISD|23761|phosphatidylserine decarboxylase##CR456540|PISD|23761|phosphatidylserine decarboxylase	0.823134	CTCF.p2:7:0.823
chr2	171729851	171729968	reg1016728.p2	8.171	+	TSC_hg19_v1_chr2_+_171673396 AK292582 BC026349 BC002815 S61898 L16888 Z22750	-56497	+	M81883 NM_000817 NM_013445 BC037780 TSC_hg19_v1_chr2_+_171673241	-56750	+	TSC_hg19_v1_chr2_+_171572707 BC069026	-157199	+	NM_001201428 AL117430 AK125761 NM_015530	55082	+	TSC_hg19_v1_chr2_+_171785776 AK315508 AK023201 AK225810 AK293640 AK023082	55792	+	TSC_hg19_v1_chr2_+_171785781 AK298020 BC007770 BC001408 AK296698 AK027349 AB528359 DQ892715 DQ895965 CU675801	55905	+	AK292582|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC026349|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC002815|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##S61898|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##L16888|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##Z22750|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##M81883|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_000817|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_013445|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC037780|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC069026|SP5|389058|Sp5 transcription factor##NM_001201428|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AL117430|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK125761|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##NM_015530|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK315508|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023201|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK225810|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK293640|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023082|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK298020|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC007770|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC001408|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK296698|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK027349|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ892715|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ895965|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa	0.791846	CTCF.p2:-3:0.792
chr4	110215319	110215425	reg1015618.p1	8.170	+	AK091888 AX747236 AK294072 AJ298293 AK294235 BC022526 NM_001146590 NM_001146627 NM_031279	-531229	-	AF068297 TSC_hg19_v1_chr4_+_109571786 AK312185 DQ893222 DQ896551 AF343342	-643577	+	TSC_hg19_v1_chr4_+_109571754 NM_021227 BC054857 BC016321 AF161425 AF201937	-643619	+	AF293340 AF293341 NM_032518 NM_198721 TSC_hg19_v1_chr4_-_110223816	8435	-	TSC_hg19_v1_chr4_+_110354836 AJ131245	139475	+	TSC_hg19_v1_chr4_-_110354918 BC009800	139571	-	AK091888|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294072|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AJ298293|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294235|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##BC022526|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146590|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146627|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_031279|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AF068297|OSTC|58505|oligosaccharyltransferase complex subunit##AK312185|OSTC|58505|oligosaccharyltransferase complex subunit##DQ893222|OSTC|58505|oligosaccharyltransferase complex subunit##DQ896551|OSTC|58505|oligosaccharyltransferase complex subunit##AF343342|OSTC|58505|oligosaccharyltransferase complex subunit##NM_021227|OSTC|58505|oligosaccharyltransferase complex subunit##BC054857|OSTC|58505|oligosaccharyltransferase complex subunit##BC016321|OSTC|58505|oligosaccharyltransferase complex subunit##AF161425|OSTC|58505|oligosaccharyltransferase complex subunit##AF201937|OSTC|58505|oligosaccharyltransferase complex subunit##AF293340|COL25A1|84570|collagen, type XXV, alpha 1##AF293341|COL25A1|84570|collagen, type XXV, alpha 1##NM_032518|COL25A1|84570|collagen, type XXV, alpha 1##NM_198721|COL25A1|84570|collagen, type XXV, alpha 1##AJ131245|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC009800|1/2-SBSRNA4|100533182|lncRNA_BC009800	0.506994	CTCF.p2:32:0.401
chr6	52926616	52926757	reg1016763.p2	8.170	+	TSC_hg19_v1_chr6_-_52926623 NM_014920 NM_016513	-51	-	AB023153 BC152464 TSC_hg19_v1_chr6_-_52926579 AF152469 AK074892	-154	-	AK315369 TSC_hg19_v1_chr6_-_52860078 AF020918 AF025887 BC096817 NM_001512	-66559	-	BC000650 NM_033481	3109	+	TSC_hg19_v1_chr6_+_52930212 AY858798	3502	+	AB209833 TSC_hg19_v1_chr6_+_52930220 AK021559	3533	+	NM_014920|ICK|22858|intestinal cell (MAK-like) kinase##NM_016513|ICK|22858|intestinal cell (MAK-like) kinase##AB023153|ICK|22858|intestinal cell (MAK-like) kinase##BC152464|ICK|22858|intestinal cell (MAK-like) kinase##AF152469|ICK|22858|intestinal cell (MAK-like) kinase##AK074892|ICK|22858|intestinal cell (MAK-like) kinase##AK315369|GSTA4|2941|glutathione S-transferase alpha 4##AF020918|GSTA4|2941|glutathione S-transferase alpha 4##AF025887|GSTA4|2941|glutathione S-transferase alpha 4##BC096817|GSTA4|2941|glutathione S-transferase alpha 4##NM_001512|GSTA4|2941|glutathione S-transferase alpha 4##BC000650|FBXO9|26268|F-box protein 9##NM_033481|FBXO9|26268|F-box protein 9##AY858798|FBXO9|26268|F-box protein 9##AB209833|FBXO9|26268|F-box protein 9##AK021559|FBXO9|26268|F-box protein 9	0.017199	
chr10	5671920	5672044	reg1015940.p1	8.169	+	AK313934 M58026 NM_005185 BC031889 AB590316	-104997	+	AB590761 AF172852 BC039172 AK222744 NM_017422	-130516	-	TSC_hg19_v1_chr10_+_5488571 NM_005863 AK294244 AK304028 AK315566 AK024919 AJ010046 BC010285 CU679671	-183359	+	TSC_hg19_v1_chr10_-_5708534 CR457302 BC012056 AF403031 AK023196	36544	-	AK292071 TSC_hg19_v1_chr10_-_5708559 AK091935 AX747265 NM_024701	36575	-	TSC_hg19_v1_chr10_+_5726806 CR936780 NM_017782	54841	+	AK313934|CALML3|810|calmodulin-like 3##M58026|CALML3|810|calmodulin-like 3##NM_005185|CALML3|810|calmodulin-like 3##BC031889|CALML3|810|calmodulin-like 3##AF172852|CALML5|51806|calmodulin-like 5##BC039172|CALML5|51806|calmodulin-like 5##AK222744|CALML5|51806|calmodulin-like 5##NM_017422|CALML5|51806|calmodulin-like 5##NM_005863|NET1|10276|neuroepithelial cell transforming 1##AK294244|NET1|10276|neuroepithelial cell transforming 1##AK304028|NET1|10276|neuroepithelial cell transforming 1##AK315566|NET1|10276|neuroepithelial cell transforming 1##AK024919|NET1|10276|neuroepithelial cell transforming 1##AJ010046|NET1|10276|neuroepithelial cell transforming 1##BC010285|NET1|10276|neuroepithelial cell transforming 1##CR457302|ASB13|79754|ankyrin repeat and SOCS box containing 13##BC012056|ASB13|79754|ankyrin repeat and SOCS box containing 13##AF403031|ASB13|79754|ankyrin repeat and SOCS box containing 13##AK023196|ASB13|79754|ankyrin repeat and SOCS box containing 13##AK292071|ASB13|79754|ankyrin repeat and SOCS box containing 13##AK091935|ASB13|79754|ankyrin repeat and SOCS box containing 13##NM_024701|ASB13|79754|ankyrin repeat and SOCS box containing 13##CR936780|FAM208B|54906|family with sequence similarity 208, member B##NM_017782|FAM208B|54906|family with sequence similarity 208, member B	0.845653	CTCF.p2:8:0.832
chr22	38909219	38909327	reg1016011.p1	8.168	+	NM_001098504 NM_006386 TSC_hg19_v1_chr22_-_38902346	-6823	-	BC029553 TSC_hg19_v1_chr22_-_38902315	-6958	-	AB209595 TSC_hg19_v1_chr22_-_38902309 AK024985 AK074224	-6967	-	D64108 CR456486 D63882 BC125163 BC125164 TSC_hg19_v1_chr22_-_38966189 BC035658 NM_007068 AK292617	56881	-	TSC_hg19_v1_chr22_-_39052371 AK301819	143090	-	TSC_hg19_v1_chr22_-_39052579 NM_001013647	143333	-	NM_001098504|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##NM_006386|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##BC029553|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AB209595|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AK024985|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AK074224|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##D64108|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##CR456486|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##D63882|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##BC125163|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##BC125164|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##BC035658|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##NM_007068|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##AK292617|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##AK301819|LOC646851|646851|putative uncharacterized protein LOC388900##NM_001013647|LOC646851|646851|putative uncharacterized protein LOC388900	0.50608	CTCF.p2:-3:0.483
chr11	56898702	56898804	reg1016830.p2	8.167	+	BC137198 NM_001005323	-142386	+	NM_001005284	-387467	-	AB463984 NM_001005213 NM_001013358	-430892	+	AK127591 NM_001005210 BC136737 BC136739 BC150572	50546	+	AK075252 BC032688 AK315542 AK074514 X89271 NM_005161	106047	-	AF441771 TSC_hg19_v1_chr11_-_57089790	190993	-	BC137198|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##NM_001005323|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##NM_001005284|OR9G4|283189|olfactory receptor, family 9, subfamily G, member 4##NM_001005213|OR9G1|390174|olfactory receptor, family 9, subfamily G, member 1##NM_001013358|OR9G9|504191|olfactory receptor, family 9, subfamily G, member 9##AK127591|LRRC55|219527|leucine rich repeat containing 55##NM_001005210|LRRC55|219527|leucine rich repeat containing 55##BC136737|LRRC55|219527|leucine rich repeat containing 55##BC136739|LRRC55|219527|leucine rich repeat containing 55##BC150572|LRRC55|219527|leucine rich repeat containing 55##AK075252|APLNR|187|apelin receptor##BC032688|APLNR|187|apelin receptor##AK315542|APLNR|187|apelin receptor##AK074514|APLNR|187|apelin receptor##X89271|APLNR|187|apelin receptor##NM_005161|APLNR|187|apelin receptor##AF441771|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa	0.0	
chr19	7419380	7419531	reg1017014.p1	8.167	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	-125495	-	TSC_hg19_v1_chr19_-_7099547 AK127494	-319904	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-349740	+	TSC_hg19_v1_chr19_+_7460030 NM_015318	40552	+	TSC_hg19_v1_chr19_+_7460061 AB011093	40622	+	AK127045 NM_001130955	85118	+	BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.994796	CTCF.p2:-5:0.995
chr4	174222850	174223001	reg1018475.p1	8.167	+	BC040577 TSC_hg19_v1_chr4_-_174090813	-132118	-	BC043556 TSC_hg19_v1_chr4_-_174090314	-132615	-	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	-132973	+	Z17240 BT019782 BT019783 AB463732 DQ892288 DQ895487 NM_001130689 TSC_hg19_v1_chr4_-_174255014	31950	-	BC001063 BC100019 BC021054 TSC_hg19_v1_chr4_-_174255505 BC000903 AK311864 NM_001130688 NM_002129	32604	-	TSC_hg19_v1_chr4_+_174292088 NM_003864 AF055993	69138	+	NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##Z17240|HMGB2|3148|high mobility group box 2##BT019782|HMGB2|3148|high mobility group box 2##BT019783|HMGB2|3148|high mobility group box 2##DQ892288|HMGB2|3148|high mobility group box 2##DQ895487|HMGB2|3148|high mobility group box 2##NM_001130689|HMGB2|3148|high mobility group box 2##BC001063|HMGB2|3148|high mobility group box 2##BC100019|HMGB2|3148|high mobility group box 2##BC000903|HMGB2|3148|high mobility group box 2##AK311864|HMGB2|3148|high mobility group box 2##NM_001130688|HMGB2|3148|high mobility group box 2##NM_002129|HMGB2|3148|high mobility group box 2##NM_003864|SAP30|8819|Sin3A-associated protein, 30kDa##AF055993|SAP30|8819|Sin3A-associated protein, 30kDa	0.378775	CTCF.p2:18:0.379
chr10	26624288	26624468	reg1001914.p2	8.166	+	M74826 BC029517 M81882 TSC_hg19_v1_chr10_+_26505702 BC126327 BC126329 AB527954 HQ258311	-118713	+	NM_000818 NM_001134366	-119143	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	-401198	+	TSC_hg19_v1_chr10_+_26727269 NM_019043	102893	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	102939	+	TSC_hg19_v1_chr10_+_26727679 BC054516	103290	+	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##HQ258311|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA##NM_019043|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	0.0	
chr2	90066119	90066240	reg1016240.p2	8.166	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-446326	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-552946	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-623590	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	11575	+	TSC_hg19_v1_chr2_+_90211706 Z69013	145539	+	TSC_hg19_v1_chr2_-_91847997 BC030764	1781824	-	BC070334|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus	0.494601	CTCF.p2:-8:0.495
chr14	51623905	51624036	reg1018808.p1	8.165	+	NM_015163 NM_052978	-61549	-	TSC_hg19_v1_chr14_-_51562045 AK055388	-61917	-	CU680598 TSC_hg19_v1_chr14_-_51561792 BC013414 D87458	-62193	-	NM_030755 AB048246 TSC_hg19_v1_chr14_+_51706980 AK302416 BC036460 BC016769 BC050366 AK075395 BC032834 AK303134 AL080080 BC056874 AY358640 AK312905 DQ891674 DQ894860 CU690352	82979	+	AL833158 NM_001042481	331884	+	TSC_hg19_v1_chr14_+_52118627 BX161430 NM_152330 BC020521 AK315764 AK055545 BX647863	494660	+	NM_015163|TRIM9|114088|tripartite motif containing 9##NM_052978|TRIM9|114088|tripartite motif containing 9##AK055388|TRIM9|114088|tripartite motif containing 9##BC013414|TRIM9|114088|tripartite motif containing 9##D87458|TRIM9|114088|tripartite motif containing 9##NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1##AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1##BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1##BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1##BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1##AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1##BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1##AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1##AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1##BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1##AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1##AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1##AL833158|FRMD6|122786|FERM domain containing 6##NM_001042481|FRMD6|122786|FERM domain containing 6##BX161430|FRMD6|122786|FERM domain containing 6##NM_152330|FRMD6|122786|FERM domain containing 6##BC020521|FRMD6|122786|FERM domain containing 6##AK315764|FRMD6|122786|FERM domain containing 6##AK055545|FRMD6|122786|FERM domain containing 6##BX647863|FRMD6|122786|FERM domain containing 6	0.0	
chr12	8810071	8810169	reg1015847.p2	8.164	+	AB040431 BC006296 NM_020661	-44681	-	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	-116646	-	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	-143889	+	TSC_hg19_v1_chr12_-_8815272 AK315807 BC005901 AK290585 AK299475	5176	-	TSC_hg19_v1_chr12_-_8815423 U37283 NM_003480	5281	-	AK124368 TSC_hg19_v1_chr12_-_8815486	5362	-	AB040431|AICDA|57379|activation-induced cytidine deaminase##BC006296|AICDA|57379|activation-induced cytidine deaminase##NM_020661|AICDA|57379|activation-induced cytidine deaminase##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##AK315807|MFAP5|8076|microfibrillar associated protein 5##BC005901|MFAP5|8076|microfibrillar associated protein 5##AK290585|MFAP5|8076|microfibrillar associated protein 5##AK299475|MFAP5|8076|microfibrillar associated protein 5##U37283|MFAP5|8076|microfibrillar associated protein 5##NM_003480|MFAP5|8076|microfibrillar associated protein 5##AK124368|MFAP5|8076|microfibrillar associated protein 5	0.930026	CTCF.p2:11:0.930
chr18	13813397	13813513	reg1017366.p1	8.164	+	TSC_hg19_v1_chr18_+_13726671 AK296370 BC017816 BX647977 AK303842 BC005290 AK292561 AB007858 AF067791 NM_003799 AB020966 BC036798	-86765	+	TSC_hg19_v1_chr18_-_13726582 AK309506 NM_001098801 NM_152352	-86869	-	TSC_hg19_v1_chr18_-_13726549 AK055618	-86949	-	BC095531 NM_005913	12087	+	AK315319 BC094710 NM_000529 AK289381	102081	-	BC010705 AK096748 BC024227 BC037787 NM_145287	319002	-	AK296370|RNMT|8731|RNA (guanine-7-) methyltransferase##BC017816|RNMT|8731|RNA (guanine-7-) methyltransferase##BX647977|RNMT|8731|RNA (guanine-7-) methyltransferase##AK303842|RNMT|8731|RNA (guanine-7-) methyltransferase##BC005290|RNMT|8731|RNA (guanine-7-) methyltransferase##AK292561|RNMT|8731|RNA (guanine-7-) methyltransferase##AB007858|RNMT|8731|RNA (guanine-7-) methyltransferase##AF067791|RNMT|8731|RNA (guanine-7-) methyltransferase##NM_003799|RNMT|8731|RNA (guanine-7-) methyltransferase##AB020966|RNMT|8731|RNA (guanine-7-) methyltransferase##BC036798|RNMT|8731|RNA (guanine-7-) methyltransferase##AK309506|FAM210A|125228|family with sequence similarity 210, member A##NM_001098801|FAM210A|125228|family with sequence similarity 210, member A##NM_152352|FAM210A|125228|family with sequence similarity 210, member A##AK055618|FAM210A|125228|family with sequence similarity 210, member A##BC095531|MC5R|4161|melanocortin 5 receptor##NM_005913|MC5R|4161|melanocortin 5 receptor##AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC010705|ZNF519|162655|zinc finger protein 519##AK096748|ZNF519|162655|zinc finger protein 519##BC024227|ZNF519|162655|zinc finger protein 519##BC037787|ZNF519|162655|zinc finger protein 519##NM_145287|ZNF519|162655|zinc finger protein 519	0.938046	CTCF.p2:0:0.938
chr21	43887536	43887660	reg1018166.p1	8.164	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-63586	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-71437	-	M12075 BC032811 NM_003225 X00474 X52003	-100976	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	28782	-	AJ269529 NM_018964	32143	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	46405	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.03251	
chr2	191375979	191376084	reg1013967.p2	8.164	+	AK098085 TSC_hg19_v1_chr2_+_191301120	-74961	+	TSC_hg19_v1_chr2_+_191273080 AK127176 NM_017694	-102968	+	TSC_hg19_v1_chr2_+_191208645 BC106006	-167375	+	AK296987 TSC_hg19_v1_chr2_-_191399436	23396	-	TSC_hg19_v1_chr2_-_191399454 NM_001142645	23435	-	TSC_hg19_v1_chr2_+_191513840 NM_005966 BC035724 AK292446	137935	+	AK098085|MFSD6|54842|major facilitator superfamily domain containing 6##AK127176|MFSD6|54842|major facilitator superfamily domain containing 6##NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6##BC106006|INPP1|3628|inositol polyphosphate-1-phosphatase##AK296987|TMEM194B|100131211|transmembrane protein 194B##NM_001142645|TMEM194B|100131211|transmembrane protein 194B##NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)	0.982177	CTCF.p2:6:0.982
chr1	242161758	242161888	reg1014217.p1	8.163	+	NM_003686 NM_006027 AF042282 AF091740 AF060479 AF084974	-149738	+	BC007491 TSC_hg19_v1_chr1_+_242011556	-150273	+	TSC_hg19_v1_chr1_+_242011520 NM_130398 AK291291	-150319	+	BC132986 BC132988 AF276659 BC127722 NM_001004343	551	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	450947	-	AK098092 NM_152666	526174	-	NM_003686|EXO1|9156|exonuclease 1##NM_006027|EXO1|9156|exonuclease 1##AF042282|EXO1|9156|exonuclease 1##AF091740|EXO1|9156|exonuclease 1##AF060479|EXO1|9156|exonuclease 1##AF084974|EXO1|9156|exonuclease 1##BC007491|EXO1|9156|exonuclease 1##NM_130398|EXO1|9156|exonuclease 1##AK291291|EXO1|9156|exonuclease 1##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5	0.825067	CTCF.p2:-10:0.825
chr16	15166203	15166328	reg1017000.p1	8.163	+	CU675948 AF092440 BC017336 NM_173474 AK300557 TSC_hg19_v1_chr16_-_15149897	-16388	-	AY203955 TSC_hg19_v1_chr16_+_15069016 DQ111782	-97233	+	AK299111 BC060871 TSC_hg19_v1_chr16_+_15068985	-97280	+	AB527833 AK300253 HQ258337 BC036182 AK314769 AK316520 BC132688 BC132690 BC104660 AJ272050 AF227156 NM_018427 AK225662	21863	-	TSC_hg19_v1_chr16_+_15489610 DQ004255 DQ004256 NM_001128423 NM_173803	323336	+	TSC_hg19_v1_chr16_+_15489637 AK096918 AK293380 BC061514	323385	+	AF092440|NTAN1|123803|N-terminal asparagine amidase##BC017336|NTAN1|123803|N-terminal asparagine amidase##NM_173474|NTAN1|123803|N-terminal asparagine amidase##AK300557|NTAN1|123803|N-terminal asparagine amidase##AY203955|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##DQ111782|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##AK299111|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC060871|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##HQ258337|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##DQ004255|MPV17L|255027|MPV17 mitochondrial membrane protein-like##DQ004256|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_001128423|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_173803|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK096918|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK293380|MPV17L|255027|MPV17 mitochondrial membrane protein-like##BC061514|MPV17L|255027|MPV17 mitochondrial membrane protein-like	0.93743	CTCF.p2:15:0.937
chr3	194675025	194675128	reg1014028.p2	8.163	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-267573	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-268453	+	NM_018385	-281871	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	316774	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	488626	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	595037	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.100631	
chr3	98062877	98063016	reg1016961.p2	8.162	+	NM_001005482	-61215	+	BC137523 BC137524 NM_001005479	-79839	+	NM_001005515	-175403	+	NM_001005517	9751	+	NM_001005516	46563	+	BC136918 BC136919 NM_001004736	125425	+	NM_001005482|OR5H2|79310|olfactory receptor, family 5, subfamily H, member 2##BC137523|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##BC137524|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##NM_001005479|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15##NM_001005517|OR5K4|403278|olfactory receptor, family 5, subfamily K, member 4##NM_001005516|OR5K3|403277|olfactory receptor, family 5, subfamily K, member 3##BC136918|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1##BC136919|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1##NM_001004736|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	0.990071	CTCF.p2:-1:0.990
chr4	96431456	96431559	reg1014978.p1	8.162	+	TSC_hg19_v1_chr4_+_95679109 NM_001203 U89326	-752401	+	BC026029 AM393306 AM393394 AM393485 AM393621 AM393813 DQ890686 DQ893868 AB587372 CU676108 CU679071 AY598328 BT007328 TSC_hg19_v1_chr4_+_95376500	-1055057	+	TSC_hg19_v1_chr4_+_95373092 BC017902 BC008741 AK291898 AK291624 AK304125 AK296980 AL832157 AL832686 AF061258 AL833151 AL833438	-1058411	+	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	38672	-	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	38869	-	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	329751	+	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB##U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB##BC026029|PDLIM5|10611|PDZ and LIM domain 5##AM393306|PDLIM5|10611|PDZ and LIM domain 5##AM393394|PDLIM5|10611|PDZ and LIM domain 5##AM393485|PDLIM5|10611|PDZ and LIM domain 5##AM393621|PDLIM5|10611|PDZ and LIM domain 5##AM393813|PDLIM5|10611|PDZ and LIM domain 5##DQ890686|PDLIM5|10611|PDZ and LIM domain 5##DQ893868|PDLIM5|10611|PDZ and LIM domain 5##AY598328|PDLIM5|10611|PDZ and LIM domain 5##BT007328|PDLIM5|10611|PDZ and LIM domain 5##BC017902|PDLIM5|10611|PDZ and LIM domain 5##BC008741|PDLIM5|10611|PDZ and LIM domain 5##AK291898|PDLIM5|10611|PDZ and LIM domain 5##AK291624|PDLIM5|10611|PDZ and LIM domain 5##AK304125|PDLIM5|10611|PDZ and LIM domain 5##AK296980|PDLIM5|10611|PDZ and LIM domain 5##AL832157|PDLIM5|10611|PDZ and LIM domain 5##AL832686|PDLIM5|10611|PDZ and LIM domain 5##AF061258|PDLIM5|10611|PDZ and LIM domain 5##AL833151|PDLIM5|10611|PDZ and LIM domain 5##AL833438|PDLIM5|10611|PDZ and LIM domain 5##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2	0.923997	CTCF.p2:-16:0.924
chr9	73864782	73864895	reg1013805.p1	8.162	+	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	-128302	-	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	-380878	-	D31716 S72504 NM_001206	-835283	-	AL136545 TSC_hg19_v1_chr9_-_74061901	197045	-	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	518740	-	AF151825 TSC_hg19_v1_chr9_-_74525994	661087	-	AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##D31716|KLF9|687|Kruppel-like factor 9##S72504|KLF9|687|Kruppel-like factor 9##NM_001206|KLF9|687|Kruppel-like factor 9##AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2##AF151825|FAM108B1|51104|family with sequence similarity 108, member B1	1.088739	CTCF.p2:17:0.987
chr15	48578052	48578164	reg1016191.p1	8.161	+	NM_000338 NM_001184832 AK129998 AK298312 BC020860	-79611	+	BX537772 NM_001145668 AK295375	-94195	+	TSC_hg19_v1_chr15_-_48470503 AB037762 BC152420 BC152451 BC068523 AK023133 NM_016132	-107591	-	TSC_hg19_v1_chr15_+_48623625 NM_001025248 NM_001025249 AK000629 BC070339 BC110377 AK298464 U90223 AB528727	45556	+	TSC_hg19_v1_chr15_+_48624363 AK291515 NM_001948 AK312122 U31930 U62891 L11877 AB049113 M89913 DQ891191 DQ894375 CR541720 CR541781	46293	+	TSC_hg19_v1_chr15_-_48937070 L13923	358975	-	NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##BX537772|CTXN2|399697|cortexin 2##NM_001145668|CTXN2|399697|cortexin 2##AK295375|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AB037762|MYEF2|50804|myelin expression factor 2##BC152420|MYEF2|50804|myelin expression factor 2##BC152451|MYEF2|50804|myelin expression factor 2##BC068523|MYEF2|50804|myelin expression factor 2##AK023133|MYEF2|50804|myelin expression factor 2##NM_016132|MYEF2|50804|myelin expression factor 2##NM_001025248|DUT|1854|deoxyuridine triphosphatase##NM_001025249|DUT|1854|deoxyuridine triphosphatase##AK000629|DUT|1854|deoxyuridine triphosphatase##BC070339|DUT|1854|deoxyuridine triphosphatase##BC110377|DUT|1854|deoxyuridine triphosphatase##AK298464|DUT|1854|deoxyuridine triphosphatase##U90223|DUT|1854|deoxyuridine triphosphatase##AK291515|DUT|1854|deoxyuridine triphosphatase##NM_001948|DUT|1854|deoxyuridine triphosphatase##AK312122|DUT|1854|deoxyuridine triphosphatase##U31930|DUT|1854|deoxyuridine triphosphatase##U62891|DUT|1854|deoxyuridine triphosphatase##L11877|DUT|1854|deoxyuridine triphosphatase##AB049113|DUT|1854|deoxyuridine triphosphatase##M89913|DUT|1854|deoxyuridine triphosphatase##DQ891191|DUT|1854|deoxyuridine triphosphatase##DQ894375|DUT|1854|deoxyuridine triphosphatase##CR541720|DUT|1854|deoxyuridine triphosphatase##CR541781|DUT|1854|deoxyuridine triphosphatase##L13923|FBN1|2200|fibrillin 1	0.993377	CTCF.p2:22:0.993
chr10	17472862	17472974	reg1015325.p1	8.160	+	TSC_hg19_v1_chr10_-_17271978 BC078172	-200932	-	TSC_hg19_v1_chr10_+_17271962 AK093924	-200939	+	TSC_hg19_v1_chr10_+_17271887 M25246	-201030	+	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	23296	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	23447	-	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	186455	-	AK093924|VIM|7431|vimentin##M25246|VIM|7431|vimentin##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A	0.981518	CTCF.p2:0:0.982
chr1	62013099	62013239	reg1021324.p1	8.160	+	TSC_hg19_v1_chr1_+_61924622 AK096483	-88477	+	TSC_hg19_v1_chr1_+_61869699 AK024964	-143446	+	TSC_hg19_v1_chr1_+_61548292 AB037860 NM_001134673 NM_005595 AK299356 BC022264 CU692518 DQ893250 DQ896579	-465111	+	AK311444 AK311705 TSC_hg19_v1_chr1_-_62190802 CU688668	177602	-	TSC_hg19_v1_chr1_-_62190806 BC048995 BC029486	177650	-	AF353990 NM_032027	177925	-	AK096483|NFIA|4774|nuclear factor I/A##AK024964|NFIA|4774|nuclear factor I/A##AB037860|NFIA|4774|nuclear factor I/A##NM_001134673|NFIA|4774|nuclear factor I/A##NM_005595|NFIA|4774|nuclear factor I/A##AK299356|NFIA|4774|nuclear factor I/A##BC022264|NFIA|4774|nuclear factor I/A##DQ893250|NFIA|4774|nuclear factor I/A##DQ896579|NFIA|4774|nuclear factor I/A##AK311444|TM2D1|83941|TM2 domain containing 1##AK311705|TM2D1|83941|TM2 domain containing 1##BC048995|TM2D1|83941|TM2 domain containing 1##BC029486|TM2D1|83941|TM2 domain containing 1##AF353990|TM2D1|83941|TM2 domain containing 1##NM_032027|TM2D1|83941|TM2 domain containing 1	0.869245	CTCF.p2:-6:0.869
chr8	8037710	8037813	reg1017194.p2	8.160	+	AK292586 NM_001193630	-253903	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-285557	+	AF295370 AJ237673 NM_018661 AB037972 AB590071 AF217245 AF516673	-298836	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	48381	+	TSC_hg19_v1_chr8_-_8175862 AF075060	138127	-	AK122582 NM_001080826	201461	-	AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF295370|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2	0.662186	CTCF.p2:0:0.662
chr8	9618156	9618291	reg1016330.p1	8.160	+	TSC_hg19_v1_chr8_+_9413439 BC023578 AF082556 NM_003747 AK301798	-204742	+	TSC_hg19_v1_chr8_+_9413423 AK302031	-204800	+	TSC_hg19_v1_chr8_+_9413421 BC098394	-204818	+	TSC_hg19_v1_chr8_+_9911765 AY958429	293546	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	293656	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	334840	+	BC023578|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AF082556|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##NM_003747|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK301798|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK302031|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##BC098394|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AY958429|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A	0.883872	CTCF.p2:-15:0.884
chr3	178152366	178152516	reg1019294.p1	8.159	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1237382	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	-1237490	-	TSC_hg19_v1_chr3_-_176914267 BX648935	-1238191	-	BC017825 NM_181361	101782	+	AF209747 NM_005832	124111	+	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	637124	-	AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3	0.596754	CTCF.p2:-4:0.597
chr5	6435586	6435675	reg1017606.p1	8.159	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	-56980	-	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	-1012721	+	TSC_hg19_v1_chr5_+_5422777 AK126937	-1012855	+	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	13223	+	TSC_hg19_v1_chr5_+_6449114 AK057805	13559	+	TSC_hg19_v1_chr5_-_6633158 AK291144 BC137083 AK298980	197524	-	AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK291144|NSUN2|54888|NOP2/Sun domain family, member 2##BC137083|NSUN2|54888|NOP2/Sun domain family, member 2##AK298980|NSUN2|54888|NOP2/Sun domain family, member 2	0.971889	CTCF.p2:10:0.972
chr22	21239915	21240013	reg1016004.p2	8.158	+	TSC_hg19_v1_chr22_+_21213366 CR456582 CU013181 CU013469 AB527222 BT007357	-26590	+	TSC_hg19_v1_chr22_+_21213294 NM_004782 AF115436 BC009715	-26667	+	AK131431 NM_058004 TSC_hg19_v1_chr22_-_21213100	-26835	-	TSC_hg19_v1_chr22_+_21271694 AK292909 NM_005207 X59656	31705	+	BC026248 TSC_hg19_v1_chr22_+_21271721	31757	+	TSC_hg19_v1_chr22_+_21271756 BC043500	31867	+	CR456582|SNAP29|9342|synaptosomal-associated protein, 29kDa##CU013181|SNAP29|9342|synaptosomal-associated protein, 29kDa##CU013469|SNAP29|9342|synaptosomal-associated protein, 29kDa##BT007357|SNAP29|9342|synaptosomal-associated protein, 29kDa##NM_004782|SNAP29|9342|synaptosomal-associated protein, 29kDa##AF115436|SNAP29|9342|synaptosomal-associated protein, 29kDa##BC009715|SNAP29|9342|synaptosomal-associated protein, 29kDa##AK131431|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_058004|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##AK292909|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like##NM_005207|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like##X59656|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like##BC026248|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like##BC043500|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	0.54988	CTCF.p2:-6:0.550
chrX	71238565	71238675	reg1015845.p1	8.158	+	TSC_hg19_v1_chrX_+_71130694 NM_001013627	-107842	+	NM_001145139 NM_001145140	-255481	+	NM_001145139 NM_001145140	-300486	-	AB082532 BC151224 NM_001024455 TSC_hg19_v1_chrX_-_71351772	113171	-	AK126598 AY572224 NM_207422	125413	+	NM_001170747 NM_006223 BC093700 BC112281 HQ258728 TSC_hg19_v1_chrX_+_71401606 AB009690 BC005234 BC070288 BC111394 BC104653 AK127605 AF143096	162955	+	NM_001013627|NHSL2|340527|NHS-like 2##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##AB082532|RGAG4|340526|retrotransposon gag domain containing 4##BC151224|RGAG4|340526|retrotransposon gag domain containing 4##NM_001024455|RGAG4|340526|retrotransposon gag domain containing 4##AK126598|FLJ44635|392490|TPT1-like protein##AY572224|FLJ44635|392490|TPT1-like protein##NM_207422|FLJ44635|392490|TPT1-like protein##NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##HQ258728|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	0.990264	CTCF.p2:-7:0.990
chr9	4662193	4662294	reg1014445.p1	8.157	+	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	-171806	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-362212	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-362280	-	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	68	+	AK295831 NM_001039395	4426	-	TSC_hg19_v1_chr9_+_4679596 AK000497 NM_017913 AK000646 AK225510 BC014133 CU680796	17418	+	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68##AK000497|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##NM_017913|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK000646|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK225510|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##BC014133|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1	0.950255	CTCF.p2:-1:0.950
chr12	31142879	31143004	reg1016190.p2	8.156	+	AK300920 NM_001080509 TSC_hg19_v1_chr12_+_31079866 BC146917 BC146922	-63077	+	TSC_hg19_v1_chr12_+_31079681 AK293947	-63281	+	TSC_hg19_v1_chr12_+_31079362 BC084571	-63580	+	TSC_hg19_v1_chr12_-_31226728 AK096360	83791	-	TSC_hg19_v1_chr12_+_31226789 BC148224 BC111733 NM_004399 NM_030653 NM_152438 AK297607 BC050069	83837	+	TSC_hg19_v1_chr12_+_31226805 U75968 BC011264	83867	+	AK300920|TSPAN11|441631|tetraspanin 11##NM_001080509|TSPAN11|441631|tetraspanin 11##BC146917|TSPAN11|441631|tetraspanin 11##BC146922|TSPAN11|441631|tetraspanin 11##AK293947|TSPAN11|441631|tetraspanin 11##AK096360|LOC100506660|100506660|uncharacterized LOC100506660##BC148224|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_004399|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_030653|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_152438|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK297607|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050069|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75968|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC011264|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11	1.548247	CTCF.p2:3:0.925	CTCF.p2:-102:0.623
chr19	5370026	5370148	reg1017116.p1	8.156	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	-29293	-	TSC_hg19_v1_chr19_+_5032899 CU687848	-337188	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-400914	+	AK098722 NM_181710 AK292251 BC017592	85339	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	252671	-	TSC_hg19_v1_chr19_-_5622794 NM_014649	252778	-	AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2##NM_014649|SAFB2|9667|scaffold attachment factor B2	0.020179	
chr2	171253711	171253808	reg1014629.p1	8.156	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	-219074	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-569801	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-572374	-	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	318099	+	TSC_hg19_v1_chr2_+_171571942 AB464708	318218	+	TSC_hg19_v1_chr2_+_171572707 BC069026	318951	+	AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##BC069026|SP5|389058|Sp5 transcription factor	0.975899	CTCF.p2:9:0.976
chr7	37248223	37248345	reg1018026.p1	8.155	+	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	-222564	-	BC064635 NM_001039459	-223594	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-484208	-	AK291784 NM_001206482	144987	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	240184	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	240271	-	D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1	0.136475	
chr19	5354630	5354745	reg1017236.p1	8.154	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	-13893	-	TSC_hg19_v1_chr19_+_5032899 CU687848	-321788	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-385514	+	AK098722 NM_181710 AK292251 BC017592	100739	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	268071	-	TSC_hg19_v1_chr19_-_5622794 NM_014649	268178	-	AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2##NM_014649|SAFB2|9667|scaffold attachment factor B2	0.024557	
chr7	108253728	108253845	reg1015694.p1	8.154	+	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-43412	+	TSC_hg19_v1_chr7_+_108210292 AK092204	-43488	+	NM_012328 TSC_hg19_v1_chr7_+_108210266	-43552	+	NM_001024607	270850	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	2477337	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	2948698	-	AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AK092204|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_012328|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)	0.839866	CTCF.p2:5:0.840
chr11	99610318	99610449	reg1016051.p1	8.153	+	AB013802 AB013803 NM_175566	-183510	+	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	-718634	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-3487209	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	947745	+	AK314174 AF247167 NM_032021	1252381	+	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	1389416	-	AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor	0.872316	CTCF.p2:18:0.872
chr1	233500576	233500727	reg1017745.p1	8.153	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	-37068	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	-69168	-	TSC_hg19_v1_chr1_+_233086381 AF416713	-414262	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	249172	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	249268	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	539961	+	AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3	0.998541	CTCF.p2:-12:0.999
chr19	28957170	28957280	reg1016773.p1	8.153	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-672297	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-672392	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-672837	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	746835	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	746896	-	NM_001146339	1060265	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.968242	CTCF.p2:-10:0.968
chrY	1650163	1650297	reg1017213.p1	8.153	+	BC043610 GQ280263 NM_178129 AK126147	-44192	-	AK301844 NM_001173473	-127579	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-128429	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	10299	+	NM_004043 U11090	14117	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	33773	+	BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase	0.321483	CTCF.p2:-21:0.308
chr14	60654984	60655128	reg1017347.p1	8.152	+	TSC_hg19_v1_chr14_-_60632103 BC007337 AF151844 AK313285 AL117420 NM_016029	-22922	-	AY359031 TSC_hg19_v1_chr14_-_60632031 BC000637	-23024	-	NM_022495 TSC_hg19_v1_chr14_+_60558640 AK095489	-96229	+	AK097843 NM_177952 AK313337	57415	+	TSC_hg19_v1_chr14_+_60715965 NM_021003 NM_177951	60902	+	TSC_hg19_v1_chr14_+_60715993 S87759 BC026691 AF070670 BC063243 AK308225	61055	+	BC007337|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AF151844|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AK313285|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AL117420|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_016029|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AY359031|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC000637|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_022495|C14orf135|64430|chromosome 14 open reading frame 135##AK095489|C14orf135|64430|chromosome 14 open reading frame 135##AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_021003|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_177951|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##S87759|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC026691|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AF070670|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC063243|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AK308225|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	0.711503	CTCF.p2:-35:0.712
chr14	65007127	65007258	reg1016580.p2	8.152	+	TSC_hg19_v1_chr14_+_64971513 AK291743	-35669	+	TSC_hg19_v1_chr14_+_64971443 AB023214	-35749	+	TSC_hg19_v1_chr14_+_64971227 BX248777 NM_001123329 NM_014950	-35934	+	TSC_hg19_v1_chr14_+_65007187 NM_021979	42	+	TSC_hg19_v1_chr14_+_65007458 AK097824 BC036107 BC034365 AB527255 BT009815 CU674866 DQ892538 DQ895749	300	+	TSC_hg19_v1_chr14_+_65016678 AK058044 NM_172365 BC068989	9453	+	AK291743|ZBTB1|22890|zinc finger and BTB domain containing 1##AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1##BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_021979|HSPA2|3306|heat shock 70kDa protein 2##AK097824|HSPA2|3306|heat shock 70kDa protein 2##BC036107|HSPA2|3306|heat shock 70kDa protein 2##BC034365|HSPA2|3306|heat shock 70kDa protein 2##BT009815|HSPA2|3306|heat shock 70kDa protein 2##DQ892538|HSPA2|3306|heat shock 70kDa protein 2##DQ895749|HSPA2|3306|heat shock 70kDa protein 2##AK058044|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##NM_172365|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##BC068989|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36	0.0	
chr16	51852400	51852495	reg1014849.p2	8.152	+	BC113881 BC113906 BC131548 Y18265 TSC_hg19_v1_chr16_-_51185251 AK295103 NM_002968	-667035	-	AK307835 NM_001127892	-667940	-	TSC_hg19_v1_chr16_+_50776066 AF161542 NM_001042412 BC012342	-1076389	+	NM_001242473	255399	-	NM_001080430	728358	-	AK299202 NM_001146188	729266	-	BC113881|SALL1|6299|sal-like 1 (Drosophila)##BC113906|SALL1|6299|sal-like 1 (Drosophila)##BC131548|SALL1|6299|sal-like 1 (Drosophila)##Y18265|SALL1|6299|sal-like 1 (Drosophila)##AK295103|SALL1|6299|sal-like 1 (Drosophila)##NM_002968|SALL1|6299|sal-like 1 (Drosophila)##AK307835|SALL1|6299|sal-like 1 (Drosophila)##NM_001127892|SALL1|6299|sal-like 1 (Drosophila)##AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)##BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001242473|LOC388276|388276|hCG2045437##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3	0.997565	CTCF.p2:10:0.998
chr3	185661409	185661534	reg1018201.p1	8.152	+	TSC_hg19_v1_chr3_-_185655843 AK315632 NM_001243879 NM_004593	-5593	-	TSC_hg19_v1_chr3_-_185655809 AK098191	-5656	-	TSC_hg19_v1_chr3_-_185655803 BC000451 BC000160 U87836 AK308267	-5681	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	164875	-	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	165385	-	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	418463	-	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC000451|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC000160|TRA2B|6434|transformer 2 beta homolog (Drosophila)##U87836|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK308267|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa	0.999007	CTCF.p2:13:0.999
chr3	186831120	186831280	reg1016740.p2	8.152	+	AK292879 BC040009 NM_003032 X62822 BC031476 L11720 X54363	-91528	+	U67847 TSC_hg19_v1_chr3_+_186714361	-116852	+	X17247 TSC_hg19_v1_chr3_+_186648632	-182623	+	TSC_hg19_v1_chr3_-_186857285 L05096 AB063610 BC012328 NM_052969	26056	-	BC065202 NM_153708 BC034744 DQ890807 DQ893962 AY562235	84142	+	BC106945 BC106946 TSC_hg19_v1_chr3_-_187009489 AK291686 AK129893 AK304334 AK300663 BX647237 AK291157 CR749615 BC039724 NM_001031849 NM_001879 NM_139125	178439	-	AK292879|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC040009|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_003032|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X62822|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC031476|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##L11720|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X54363|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##L05096|RPL39L|116832|ribosomal protein L39-like##AB063610|RPL39L|116832|ribosomal protein L39-like##BC012328|RPL39L|116832|ribosomal protein L39-like##NM_052969|RPL39L|116832|ribosomal protein L39-like##BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1##NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1##BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1##AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1##BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	0.992643	CTCF.p2:-13:0.993
chr8	85766752	85766897	reg1017183.p1	8.152	+	NM_001100391 BC031090	-669720	+	TSC_hg19_v1_chr8_+_85095702 AK095026	-671089	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	-671281	+	AK300234 NM_033402 TSC_hg19_v1_chr8_+_86019350	252523	+	TSC_hg19_v1_chr8_+_86019442 BC030701 BC070092 AK056185 AK300874 AK302648 AK307350 AK307636 AK307443	252645	+	NM_001083588 NM_001951 U31556 TSC_hg19_v1_chr8_+_86089622 Z78409 X86097	322797	+	NM_001100391|RALYL|138046|RALY RNA binding protein-like##BC031090|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK300234|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_033402|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC030701|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC070092|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK056185|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK300874|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK302648|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307350|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307636|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307443|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_001083588|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001951|E2F5|1875|E2F transcription factor 5, p130-binding##U31556|E2F5|1875|E2F transcription factor 5, p130-binding##Z78409|E2F5|1875|E2F transcription factor 5, p130-binding##X86097|E2F5|1875|E2F transcription factor 5, p130-binding	0.315645	CTCF.p2:-16:0.316
chr1	230778022	230778168	reg1017241.p1	8.151	+	BC150638 NM_024554	-264705	-	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-575099	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-575153	+	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	101	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	138	+	TSC_hg19_v1_chr1_+_230778257 Z34975 AK312678 BC051906 CU677137 DQ892244 DQ895445 EU176335	209	+	BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2##Z34975|COG2|22796|component of oligomeric golgi complex 2##AK312678|COG2|22796|component of oligomeric golgi complex 2##BC051906|COG2|22796|component of oligomeric golgi complex 2##DQ892244|COG2|22796|component of oligomeric golgi complex 2##DQ895445|COG2|22796|component of oligomeric golgi complex 2##EU176335|COG2|22796|component of oligomeric golgi complex 2	0.967439	CTCF.p2:15:0.967
chr1	79819078	79819177	reg1015606.p2	8.151	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-346700	-	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-703629	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	-732996	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	1952800	+	AF104266 AF104938 AF104939 NM_012302	2446954	+	AK097722 TSC_hg19_v1_chr1_-_84326308	4507141	-	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.926961	CTCF.p2:-3:0.927
chr18	55225234	55225368	reg1018065.p1	8.151	+	TSC_hg19_v1_chr18_+_55102810 NM_004852 Y18198 BC108925 BC108926	-122436	+	AB208996 NM_015879	-205581	+	AK127964 TSC_hg19_v1_chr18_+_54814333 BC021740 BC035018 AK301799	-410962	+	TSC_hg19_v1_chr18_-_55253912 AK223190 BX571744 AB529061 BT019958 BT019959 AK292937 D00726 AK299643 AK092416 BC039841 NM_000140 NM_001012515	28618	-	TSC_hg19_v1_chr18_-_55287856 AB528053	62569	-	CU674834 TSC_hg19_v1_chr18_-_55288981 AK129897 D84273	63666	-	NM_004852|ONECUT2|9480|one cut homeobox 2##Y18198|ONECUT2|9480|one cut homeobox 2##BC108925|ONECUT2|9480|one cut homeobox 2##BC108926|ONECUT2|9480|one cut homeobox 2##AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##AK127964|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC021740|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC035018|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK301799|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK223190|FECH|2235|ferrochelatase##BX571744|FECH|2235|ferrochelatase##BT019958|FECH|2235|ferrochelatase##BT019959|FECH|2235|ferrochelatase##AK292937|FECH|2235|ferrochelatase##D00726|FECH|2235|ferrochelatase##AK299643|FECH|2235|ferrochelatase##AK092416|FECH|2235|ferrochelatase##BC039841|FECH|2235|ferrochelatase##NM_000140|FECH|2235|ferrochelatase##NM_001012515|FECH|2235|ferrochelatase##AK129897|NARS|4677|asparaginyl-tRNA synthetase##D84273|NARS|4677|asparaginyl-tRNA synthetase	0.999906	CTCF.p2:2:1.000
chr6	43726351	43726484	reg1016295.p2	8.151	+	TSC_hg19_v1_chr6_-_43655539 NM_001193343 NM_018135	-70869	-	TSC_hg19_v1_chr6_-_43655521 CU679679 DQ884400 AK300757 BC010364 AK307183 AB049952	-70898	-	NM_001193341 NM_152732 AK291399 BC029519 AK055407	-113621	+	TSC_hg19_v1_chr6_+_43737947 NM_001025366 NM_001025367 NM_001025368 NM_001025369 NM_001025370 NM_001033756 NM_001171622 NM_001171623 NM_001171624 NM_001171625 NM_001171626 NM_001171627 NM_001171628 NM_001171629 NM_001171630 NM_001204384 NM_001204385 NM_003376 BC058855 BC019867	11601	+	TSC_hg19_v1_chr6_+_43738284 AF022375	11830	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	12117	+	NM_001193343|MRPS18A|55168|mitochondrial ribosomal protein S18A##NM_018135|MRPS18A|55168|mitochondrial ribosomal protein S18A##DQ884400|MRPS18A|55168|mitochondrial ribosomal protein S18A##AK300757|MRPS18A|55168|mitochondrial ribosomal protein S18A##BC010364|MRPS18A|55168|mitochondrial ribosomal protein S18A##AK307183|MRPS18A|55168|mitochondrial ribosomal protein S18A##AB049952|MRPS18A|55168|mitochondrial ribosomal protein S18A##NM_001193341|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##NM_152732|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##AK291399|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##BC029519|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##AK055407|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##NM_001025366|VEGFA|7422|vascular endothelial growth factor A##NM_001025367|VEGFA|7422|vascular endothelial growth factor A##NM_001025368|VEGFA|7422|vascular endothelial growth factor A##NM_001025369|VEGFA|7422|vascular endothelial growth factor A##NM_001025370|VEGFA|7422|vascular endothelial growth factor A##NM_001033756|VEGFA|7422|vascular endothelial growth factor A##NM_001171622|VEGFA|7422|vascular endothelial growth factor A##NM_001171623|VEGFA|7422|vascular endothelial growth factor A##NM_001171624|VEGFA|7422|vascular endothelial growth factor A##NM_001171625|VEGFA|7422|vascular endothelial growth factor A##NM_001171626|VEGFA|7422|vascular endothelial growth factor A##NM_001171627|VEGFA|7422|vascular endothelial growth factor A##NM_001171628|VEGFA|7422|vascular endothelial growth factor A##NM_001171629|VEGFA|7422|vascular endothelial growth factor A##NM_001171630|VEGFA|7422|vascular endothelial growth factor A##NM_001204384|VEGFA|7422|vascular endothelial growth factor A##NM_001204385|VEGFA|7422|vascular endothelial growth factor A##NM_003376|VEGFA|7422|vascular endothelial growth factor A##BC058855|VEGFA|7422|vascular endothelial growth factor A##BC019867|VEGFA|7422|vascular endothelial growth factor A##AF022375|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A	0.44467	CTCF.p2:8:0.445
chr7	129702921	129703060	reg1016339.p1	8.151	+	TSC_hg19_v1_chr7_-_129691215 BC000190 AB463378 AJ537494 AM393415 CU679956 BC011551 AF151050 AK001317 AK022373 NM_016478	-11769	-	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	-110181	-	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	-110239	-	TSC_hg19_v1_chr7_+_129710381 BC044884 NM_014997 BC036464	7370	+	TSC_hg19_v1_chr7_+_129710402 D87454	7443	+	TSC_hg19_v1_chr7_+_129710580 BC009977	7609	+	BC000190|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AJ537494|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AM393415|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC011551|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AF151050|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK001317|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK022373|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_016478|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC044884|KLHDC10|23008|kelch domain containing 10##NM_014997|KLHDC10|23008|kelch domain containing 10##BC036464|KLHDC10|23008|kelch domain containing 10##D87454|KLHDC10|23008|kelch domain containing 10##BC009977|KLHDC10|23008|kelch domain containing 10	0.998565	CTCF.p2:12:0.999
chr9	21789796	21789937	reg1006476.p2	8.150	+	AK124391 TSC_hg19_v1_chr9_-_21559834	-230084	-	AY358570 NM_176891	-307555	-	NM_024013 V00538 V00537 BC112300 BC112302 BC074928 BC074929 AB464595 CU686802 HQ258738 JN848523	-349387	+	TSC_hg19_v1_chr9_+_21802647 AF109294 AY712791 NM_002451 U22233 L40432 AK300592 AK309365	12774	+	BC026106 TSC_hg19_v1_chr9_+_21802660 BC012316 BC018625	12798	+	TSC_hg19_v1_chr9_+_21802691 CU693136 CR541670 CR541710	12851	+	AK124391|MIR31HG|554202|MIR31 host gene (non-protein coding)##AY358570|IFNE|338376|interferon, epsilon##NM_176891|IFNE|338376|interferon, epsilon##NM_024013|IFNA1|3439|interferon, alpha 1##V00538|IFNA1|3439|interferon, alpha 1##V00537|IFNA1|3439|interferon, alpha 1##BC112300|IFNA1|3439|interferon, alpha 1##BC112302|IFNA1|3439|interferon, alpha 1##BC074928|IFNA1|3439|interferon, alpha 1##BC074929|IFNA1|3439|interferon, alpha 1##HQ258738|IFNA1|3439|interferon, alpha 1##AF109294|MTAP|4507|methylthioadenosine phosphorylase##AY712791|MTAP|4507|methylthioadenosine phosphorylase##NM_002451|MTAP|4507|methylthioadenosine phosphorylase##U22233|MTAP|4507|methylthioadenosine phosphorylase##L40432|MTAP|4507|methylthioadenosine phosphorylase##AK300592|MTAP|4507|methylthioadenosine phosphorylase##AK309365|MTAP|4507|methylthioadenosine phosphorylase##BC026106|MTAP|4507|methylthioadenosine phosphorylase##BC012316|MTAP|4507|methylthioadenosine phosphorylase##BC018625|MTAP|4507|methylthioadenosine phosphorylase##CR541670|MTAP|4507|methylthioadenosine phosphorylase##CR541710|MTAP|4507|methylthioadenosine phosphorylase	0.976716	CTCF.p2:14:0.977
chr19	55803470	55803572	reg1015523.p1	8.149	+	TSC_hg19_v1_chr19_+_55795772 AY458602 HQ830199 AY505124 AL834275	-7683	+	AF479827 NM_032430	-7988	+	AF217996 NM_001130106 NM_012267	-11783	-	TSC_hg19_v1_chr19_+_55813404 AK124999	9892	+	BC016681 TSC_hg19_v1_chr19_+_55813629	10094	+	BC171904 BC171893 BC171901 TSC_hg19_v1_chr19_-_55836705 NM_001085488	33168	-	AY458602|BRSK1|84446|BR serine/threonine kinase 1##HQ830199|BRSK1|84446|BR serine/threonine kinase 1##AY505124|BRSK1|84446|BR serine/threonine kinase 1##AL834275|BRSK1|84446|BR serine/threonine kinase 1##AF479827|BRSK1|84446|BR serine/threonine kinase 1##NM_032430|BRSK1|84446|BR serine/threonine kinase 1##AF217996|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##NM_001130106|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##NM_012267|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##AK124999|BRSK1|84446|BR serine/threonine kinase 1##BC016681|BRSK1|84446|BR serine/threonine kinase 1##BC171904|TMEM150B|284417|transmembrane protein 150B##BC171893|TMEM150B|284417|transmembrane protein 150B##BC171901|TMEM150B|284417|transmembrane protein 150B##NM_001085488|TMEM150B|284417|transmembrane protein 150B	0.900321	CTCF.p2:-22:0.900
chr12	119553246	119553366	reg1018685.p1	8.147	+	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	-133959	+	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	-738904	+	TSC_hg19_v1_chr12_-_118810713 NM_016281	-742576	-	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	63373	+	BC040553 NM_178499	219210	+	NM_001136534 AK296289	477994	+	AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_016281|TAOK3|51347|TAO kinase 3##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60##NM_001136534|TMEM233|387890|transmembrane protein 233##AK296289|TMEM233|387890|transmembrane protein 233	0.970306	CTCF.p2:-17:0.970
chr13	60480670	60480826	reg1019511.p1	8.147	+	BC041395 TSC_hg19_v1_chr13_-_60325215	-155604	-	TSC_hg19_v1_chr13_+_58207858 AK307545	-2272852	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	-2274801	+	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	106572	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	257233	-	TSC_hg19_v1_chr13_-_60738096 NM_001042517	257353	-	AK307545|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	0.010917	
chr17	38771959	38772097	reg1007724.p2	8.147	+	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	-50310	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	-114182	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-172209	+	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	32042	-	BC069196 TSC_hg19_v1_chr17_-_38804818	32768	-	BX538083 EU832123 EU832217 BC032815 AK092967 AK308598 NM_152349	49322	-	BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC069196|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BX538083|KRT222|125113|keratin 222##EU832123|KRT222|125113|keratin 222##EU832217|KRT222|125113|keratin 222##BC032815|KRT222|125113|keratin 222##AK308598|KRT222|125113|keratin 222##NM_152349|KRT222|125113|keratin 222	0.183719	
chr5	121836582	121836696	reg1017424.p1	8.147	+	BC029465 TSC_hg19_v1_chr5_-_121814783	-21856	-	TSC_hg19_v1_chr5_+_121647890 DQ227317 NM_001242935 NM_005460 BC094759 BC040552 AK304646 AK310835 AF076929 BC033743	-188781	+	AK299687 TSC_hg19_v1_chr5_+_121647434	-189227	+	TSC_hg19_v1_chr5_+_122110737 AK023716 NM_003100	274105	+	AK023581 TSC_hg19_v1_chr5_+_122110776 BC003382 AF065482 AK222968	274130	+	TSC_hg19_v1_chr5_+_122110786 AY272044 AK002170 AB464236 BT009841 DQ890933 DQ894096 AF043453	274173	+	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein##NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein##NM_005460|SNCAIP|9627|synuclein, alpha interacting protein##BC094759|SNCAIP|9627|synuclein, alpha interacting protein##BC040552|SNCAIP|9627|synuclein, alpha interacting protein##AK304646|SNCAIP|9627|synuclein, alpha interacting protein##AK310835|SNCAIP|9627|synuclein, alpha interacting protein##AF076929|SNCAIP|9627|synuclein, alpha interacting protein##BC033743|SNCAIP|9627|synuclein, alpha interacting protein##AK299687|SNCAIP|9627|synuclein, alpha interacting protein##AK023716|SNX2|6643|sorting nexin 2##NM_003100|SNX2|6643|sorting nexin 2##AK023581|SNX2|6643|sorting nexin 2##BC003382|SNX2|6643|sorting nexin 2##AF065482|SNX2|6643|sorting nexin 2##AK222968|SNX2|6643|sorting nexin 2##AY272044|SNX2|6643|sorting nexin 2##AK002170|SNX2|6643|sorting nexin 2##BT009841|SNX2|6643|sorting nexin 2##DQ890933|SNX2|6643|sorting nexin 2##DQ894096|SNX2|6643|sorting nexin 2##AF043453|SNX2|6643|sorting nexin 2	0.859164	CTCF.p2:9:0.859
chrX	82724713	82724820	reg1015915.p2	8.147	+	TSC_hg19_v1_chrX_+_80457600 BC016709 AL136718 AK129610 AF042081 AK310011 AB590910 CR533478	-2267118	+	TSC_hg19_v1_chrX_+_80457572 AK309351	-2267190	+	AK094058 AX748432 NM_030763	-2267326	-	AK314967 NM_000307 TSC_hg19_v1_chrX_+_82763302 X82324 AB464667	38533	+	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	391405	+	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	718206	-	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5##AK314967|POU3F4|5456|POU class 3 homeobox 4##NM_000307|POU3F4|5456|POU class 3 homeobox 4##X82324|POU3F4|5456|POU class 3 homeobox 4##BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	0.814804	CTCF.p2:4:0.815
chr17	66907972	66908098	reg1017566.p2	8.146	+	AK056789 BC136686 BC136689 AY358197 NM_001243746 NM_017565 TSC_hg19_v1_chr17_-_66597112	-311012	-	AK298071 TSC_hg19_v1_chr17_-_66596742	-311296	-	TSC_hg19_v1_chr17_+_66508570 BC036285 S54705 AK124586 AK312307 CR749311 M18468 M33336	-399436	+	BC130280 BC143971 BC143972 AK304286 BC010392 AB020629 BC047765 BC094689 AK304360 AK295876 BC037309 BC024003 NM_007168	43421	-	BC062472 AK057068 AY028899 NM_080283	149055	-	BC125231 BC125232 AY028898 NM_080284 TSC_hg19_v1_chr17_-_67138037 BC070125 AK308431 BC029852	230040	-	AK056789|FAM20A|54757|family with sequence similarity 20, member A##BC136686|FAM20A|54757|family with sequence similarity 20, member A##BC136689|FAM20A|54757|family with sequence similarity 20, member A##AY358197|FAM20A|54757|family with sequence similarity 20, member A##NM_001243746|FAM20A|54757|family with sequence similarity 20, member A##NM_017565|FAM20A|54757|family with sequence similarity 20, member A##AK298071|FAM20A|54757|family with sequence similarity 20, member A##BC036285|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##S54705|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK124586|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK312307|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##CR749311|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M18468|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M33336|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	0.870582	CTCF.p2:10:0.871
chr4	120235648	120235777	reg1018780.p1	8.146	+	AY605045 NM_001170330	-10113	-	TSC_hg19_v1_chr4_-_120221773 AK025703 AF075061 BC017399 NM_001001701	-13878	-	TSC_hg19_v1_chr4_+_120133867 BC062741 NM_019050 CR749490	-101872	+	CU686944 AK025079 BC069617 BC069466 BC069625 BC069637 BC111791 NM_000134	7574	-	TSC_hg19_v1_chr4_-_120375778 BC070391	140066	-	AM392687 AM392735 AM392945 AM393171 AM393311 AM393426 AM393432 AM393814 AY264918 AB015656 NM_033430 AF155193 TSC_hg19_v1_chr4_-_120548474	312693	-	AY605045|C4orf3|401152|chromosome 4 open reading frame 3##NM_001170330|C4orf3|401152|chromosome 4 open reading frame 3##AK025703|C4orf3|401152|chromosome 4 open reading frame 3##AF075061|C4orf3|401152|chromosome 4 open reading frame 3##BC017399|C4orf3|401152|chromosome 4 open reading frame 3##NM_001001701|C4orf3|401152|chromosome 4 open reading frame 3##BC062741|USP53|54532|ubiquitin specific peptidase 53##NM_019050|USP53|54532|ubiquitin specific peptidase 53##CR749490|USP53|54532|ubiquitin specific peptidase 53##AK025079|FABP2|2169|fatty acid binding protein 2, intestinal##BC069617|FABP2|2169|fatty acid binding protein 2, intestinal##BC069466|FABP2|2169|fatty acid binding protein 2, intestinal##BC069625|FABP2|2169|fatty acid binding protein 2, intestinal##BC069637|FABP2|2169|fatty acid binding protein 2, intestinal##BC111791|FABP2|2169|fatty acid binding protein 2, intestinal##NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal##AM392687|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM392735|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM392945|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393171|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393311|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393426|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393432|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393814|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AY264918|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AB015656|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033430|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155193|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	0.997793	CTCF.p2:0:0.998
chr12	71945437	71945568	reg1019235.p1	8.145	+	TSC_hg19_v1_chr12_+_71833761 AK075399 AF062006 FN820440 NM_003667 BC096324 BC096325 BC096326 BC099650 AF061444	-111692	+	TSC_hg19_v1_chr12_+_71833577 AK294985 AK315133	-111952	+	BC005246 NM_004616	-393724	-	AB385347 CU677389 TSC_hg19_v1_chr12_-_72057432	111908	-	TSC_hg19_v1_chr12_-_72057617 AB011118 BC073843 BC064336 BX647709 BC015679	112096	-	TSC_hg19_v1_chr12_-_72057679 NM_144982	112210	-	AK075399|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AF062006|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##FN820440|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##NM_003667|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096324|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096325|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096326|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC099650|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AF061444|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AK294985|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AK315133|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC005246|TSPAN8|7103|tetraspanin 8##NM_004616|TSPAN8|7103|tetraspanin 8##AB011118|ZFC3H1|196441|zinc finger, C3H1-type containing##BC073843|ZFC3H1|196441|zinc finger, C3H1-type containing##BC064336|ZFC3H1|196441|zinc finger, C3H1-type containing##BX647709|ZFC3H1|196441|zinc finger, C3H1-type containing##BC015679|ZFC3H1|196441|zinc finger, C3H1-type containing##NM_144982|ZFC3H1|196441|zinc finger, C3H1-type containing	0.184506	
chr19	48774532	48774652	reg1018871.p2	8.145	+	TSC_hg19_v1_chr19_-_48759141 BC056891 BC034564 BC046136 NM_001184902 NM_001184904	-15421	-	AK125548 TSC_hg19_v1_chr19_+_48758936 BC060888 BC008448 BC033836	-15643	+	AB023172 AF322184 AF511652 TSC_hg19_v1_chr19_-_48753084 BC041697 BC045539 AK302327 AK311079 AK297045 BX648568 AK297069 NM_001184901 NM_001184903 NM_014959	-21568	-	AK075062 NM_153608	61	+	BC007730 NM_144577	48739	-	TSC_hg19_v1_chr19_-_48825152 AK128144	50578	-	BC056891|CARD8|22900|caspase recruitment domain family, member 8##BC034564|CARD8|22900|caspase recruitment domain family, member 8##BC046136|CARD8|22900|caspase recruitment domain family, member 8##NM_001184902|CARD8|22900|caspase recruitment domain family, member 8##NM_001184904|CARD8|22900|caspase recruitment domain family, member 8##AK125548|LOC100505812|100505812|uncharacterized LOC100505812##BC060888|LOC100505812|100505812|uncharacterized LOC100505812##AB023172|CARD8|22900|caspase recruitment domain family, member 8##AF322184|CARD8|22900|caspase recruitment domain family, member 8##AF511652|CARD8|22900|caspase recruitment domain family, member 8##BC041697|CARD8|22900|caspase recruitment domain family, member 8##BC045539|CARD8|22900|caspase recruitment domain family, member 8##AK302327|CARD8|22900|caspase recruitment domain family, member 8##AK311079|CARD8|22900|caspase recruitment domain family, member 8##AK297045|CARD8|22900|caspase recruitment domain family, member 8##BX648568|CARD8|22900|caspase recruitment domain family, member 8##AK297069|CARD8|22900|caspase recruitment domain family, member 8##NM_001184901|CARD8|22900|caspase recruitment domain family, member 8##NM_001184903|CARD8|22900|caspase recruitment domain family, member 8##NM_014959|CARD8|22900|caspase recruitment domain family, member 8##AK075062|ZNF114|163071|zinc finger protein 114##NM_153608|ZNF114|163071|zinc finger protein 114##BC007730|CCDC114|93233|coiled-coil domain containing 114##NM_144577|CCDC114|93233|coiled-coil domain containing 114##AK128144|CCDC114|93233|coiled-coil domain containing 114	0.0	
chr20	4072654	4072754	reg1015609.p1	8.145	+	AL096778 NM_007219 BC039584 TSC_hg19_v1_chr20_-_3996221 BC000213 BC003141 NM_001134337 NM_001134338 BC032738	-76539	-	NM_153640 BC107724 BC065019	-202215	+	TSC_hg19_v1_chr20_+_3870042 AK310190 AK097796 BC142976 BC009421	-202648	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	56731	+	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	56819	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	156886	-	AL096778|RNF24|11237|ring finger protein 24##NM_007219|RNF24|11237|ring finger protein 24##BC039584|RNF24|11237|ring finger protein 24##BC000213|RNF24|11237|ring finger protein 24##NM_001134337|RNF24|11237|ring finger protein 24##NM_001134338|RNF24|11237|ring finger protein 24##NM_153640|PANK2|80025|pantothenate kinase 2##BC107724|PANK2|80025|pantothenate kinase 2##BC065019|PANK2|80025|pantothenate kinase 2##AK310190|PANK2|80025|pantothenate kinase 2##AK097796|PANK2|80025|pantothenate kinase 2##BC142976|PANK2|80025|pantothenate kinase 2##BC009421|PANK2|80025|pantothenate kinase 2##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor	0.537355	CTCF.p2:-13:0.537
chr6	7339495	7339615	reg1015311.p2	8.145	+	BT007387 CR456961 AB464204 DQ892751 EU176743 TSC_hg19_v1_chr6_-_7313433 Z12830 AK075562 AK222762 AK222809 AK291550 AK312653 CR936719 BC007710 NM_003144	-26109	-	BX647723 TSC_hg19_v1_chr6_+_7108910	-230652	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	-231332	+	AF414185 NM_001170692 NM_001170693 NM_205864 TSC_hg19_v1_chr6_-_7389974	50412	-	TSC_hg19_v1_chr6_+_7390042 AY094356 AK314467 BC006104 NM_031480 AK054568	50543	+	AF258661 NM_153005	63324	+	BT007387|SSR1|6745|signal sequence receptor, alpha##CR456961|SSR1|6745|signal sequence receptor, alpha##DQ892751|SSR1|6745|signal sequence receptor, alpha##EU176743|SSR1|6745|signal sequence receptor, alpha##Z12830|SSR1|6745|signal sequence receptor, alpha##AK075562|SSR1|6745|signal sequence receptor, alpha##AK222762|SSR1|6745|signal sequence receptor, alpha##AK222809|SSR1|6745|signal sequence receptor, alpha##AK291550|SSR1|6745|signal sequence receptor, alpha##AK312653|SSR1|6745|signal sequence receptor, alpha##CR936719|SSR1|6745|signal sequence receptor, alpha##BC007710|SSR1|6745|signal sequence receptor, alpha##NM_003144|SSR1|6745|signal sequence receptor, alpha##BX647723|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1##AF414185|CAGE1|285782|cancer antigen 1##NM_001170692|CAGE1|285782|cancer antigen 1##NM_001170693|CAGE1|285782|cancer antigen 1##NM_205864|CAGE1|285782|cancer antigen 1##AY094356|RIOK1|83732|RIO kinase 1 (yeast)##AK314467|RIOK1|83732|RIO kinase 1 (yeast)##BC006104|RIOK1|83732|RIO kinase 1 (yeast)##NM_031480|RIOK1|83732|RIO kinase 1 (yeast)##AK054568|RIOK1|83732|RIO kinase 1 (yeast)##AF258661|RIOK1|83732|RIO kinase 1 (yeast)##NM_153005|RIOK1|83732|RIO kinase 1 (yeast)	1.409561	CTCF.p2:6:0.673	CTCF.p2:-33:0.736
chr11	64491064	64491147	reg1014503.p1	8.144	+	TSC_hg19_v1_chr11_-_64490666 AB023138 BC150275 NM_015080 NM_138732	-440	-	TSC_hg19_v1_chr11_-_64410785 NM_138734	-80314	-	BC043422 TSC_hg19_v1_chr11_-_64377473	-113703	-	HQ258466 AB590919 TSC_hg19_v1_chr11_-_64510439	19291	-	TSC_hg19_v1_chr11_-_64510461 AK314637	19363	-	TSC_hg19_v1_chr11_-_64511625 AF081194 U78170 AK122694 NM_001098671	20488	-	AB023138|NRXN2|9379|neurexin 2##BC150275|NRXN2|9379|neurexin 2##NM_015080|NRXN2|9379|neurexin 2##NM_138732|NRXN2|9379|neurexin 2##NM_138734|NRXN2|9379|neurexin 2##HQ258466|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AK314637|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AF081194|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##U78170|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AK122694|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##NM_001098671|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)	0.999711	CTCF.p2:7:1.000
chr17	40700310	40700439	reg1018348.p1	8.144	+	TSC_hg19_v1_chr17_+_40688278 BC053991 L78464 U43573	-12097	+	U40846 TSC_hg19_v1_chr17_+_40688258	-12150	+	NM_000263	-12424	+	NM_000413	3609	+	BC065478 BC064353 TSC_hg19_v1_chr17_-_40706752 BC080562 BC037415 BC043620 AK057023	6313	-	NM_001042529 NM_001042530 NM_001042531 NM_001042532 NM_025233 TSC_hg19_v1_chr17_+_40714143 AY094602	13743	+	BC053991|NAGLU|4669|N-acetylglucosaminidase, alpha##L78464|NAGLU|4669|N-acetylglucosaminidase, alpha##U43573|NAGLU|4669|N-acetylglucosaminidase, alpha##U40846|NAGLU|4669|N-acetylglucosaminidase, alpha##NM_000263|NAGLU|4669|N-acetylglucosaminidase, alpha##NM_000413|HSD17B1|3292|hydroxysteroid (17-beta) dehydrogenase 1##BC037415|HSD17B1|3292|hydroxysteroid (17-beta) dehydrogenase 1##NM_001042529|COASY|80347|CoA synthase##NM_001042530|COASY|80347|CoA synthase##NM_001042531|COASY|80347|CoA synthase##NM_001042532|COASY|80347|CoA synthase##NM_025233|COASY|80347|CoA synthase##AY094602|COASY|80347|CoA synthase	0.02618	
chr9	6054630	6054783	reg1011069.p1	8.144	+	AF039023 AK300408 BC098406 TSC_hg19_v1_chr9_-_6015616 AK307840 BX537405 NM_001243202 NM_001243203 NM_012416	-39075	-	TSC_hg19_v1_chr9_-_6007953 NM_001017969	-46742	-	BC108654 TSC_hg19_v1_chr9_-_5968443	-86298	-	NM_001199640 NM_001199641 NM_033439 AK295908 AK313414 TSC_hg19_v1_chr9_+_6215806 AK303943 BC047085	161090	+	NM_001001874 NM_001001875 NM_033516 AK057479 AY032877 BC017589 BC042113 BC033792	273669	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	358438	+	AF039023|RANBP6|26953|RAN binding protein 6##AK300408|RANBP6|26953|RAN binding protein 6##BC098406|RANBP6|26953|RAN binding protein 6##BX537405|RANBP6|26953|RAN binding protein 6##NM_001243202|RANBP6|26953|RAN binding protein 6##NM_001243203|RANBP6|26953|RAN binding protein 6##NM_012416|RANBP6|26953|RAN binding protein 6##NM_001017969|KIAA2026|158358|KIAA2026##NM_001199640|IL33|90865|interleukin 33##NM_001199641|IL33|90865|interleukin 33##NM_033439|IL33|90865|interleukin 33##AK295908|IL33|90865|interleukin 33##AK313414|IL33|90865|interleukin 33##AK303943|IL33|90865|interleukin 33##BC047085|IL33|90865|interleukin 33##NM_001001874|TPD52L3|89882|tumor protein D52-like 3##NM_001001875|TPD52L3|89882|tumor protein D52-like 3##NM_033516|TPD52L3|89882|tumor protein D52-like 3##AK057479|TPD52L3|89882|tumor protein D52-like 3##AY032877|TPD52L3|89882|tumor protein D52-like 3##BC017589|TPD52L3|89882|tumor protein D52-like 3##BC042113|TPD52L3|89882|tumor protein D52-like 3##BC033792|TPD52L3|89882|tumor protein D52-like 3##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	0.999119	CTCF.p2:-10:0.999
chr14	37074234	37074373	reg1016806.p1	8.143	+	BC041090 NM_014360 AF000295 AK313537	-22505	-	BT009773 DQ892964 DQ896211 D50740 BC006221 U43203 NM_001079668	-84922	-	NM_003317 U33749	-85401	-	NM_006194	52469	+	TSC_hg19_v1_chr14_+_37131069 BC001159	56781	+	AK313627 TSC_hg19_v1_chr14_+_37131133 AB248958	56822	+	BC041090|NKX2-8|26257|NK2 homeobox 8##NM_014360|NKX2-8|26257|NK2 homeobox 8##AF000295|NKX2-8|26257|NK2 homeobox 8##AK313537|NKX2-8|26257|NK2 homeobox 8##BT009773|NKX2-1|7080|NK2 homeobox 1##DQ892964|NKX2-1|7080|NK2 homeobox 1##DQ896211|NKX2-1|7080|NK2 homeobox 1##D50740|NKX2-1|7080|NK2 homeobox 1##BC006221|NKX2-1|7080|NK2 homeobox 1##U43203|NKX2-1|7080|NK2 homeobox 1##NM_001079668|NKX2-1|7080|NK2 homeobox 1##NM_003317|NKX2-1|7080|NK2 homeobox 1##U33749|NKX2-1|7080|NK2 homeobox 1##NM_006194|PAX9|5083|paired box 9##BC001159|PAX9|5083|paired box 9##AK313627|PAX9|5083|paired box 9##AB248958|PAX9|5083|paired box 9	0.883982	CTCF.p2:12:0.884
chr22	39403821	39403924	reg1013183.p1	8.143	+	AK024854 NM_004900 U61084 CT841510 AB527109 AB528064 AB528855 CU012951 CU012954 CU013239 CU013242 CU691044 AY743217 EU527884	-25441	+	NM_001193289 NM_145699 U03891 BC126416 BC144146 CR456393 AB528063 CU012950 CU013238 HQ258100	-50262	+	TSC_hg19_v1_chr22_-_39268255 AK094829 NM_014292	-135568	-	TSC_hg19_v1_chr22_+_39410261 AK313272 AF165520 BC011739 NM_014508 BC021080	6379	+	CR456394 TSC_hg19_v1_chr22_+_39410295 AB208979 AB590057 CU012952 CU013240	6454	+	NM_152426 TSC_hg19_v1_chr22_+_39417130	13255	+	AK024854|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##NM_004900|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##U61084|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CT841510|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012951|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012954|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##CU013239|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU013242|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AY743217|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##EU527884|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##NM_001193289|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##NM_145699|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##U03891|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC126416|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC144146|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CR456393|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU012950|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU013238|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##HQ258100|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##AK094829|CBX6|23466|chromobox homolog 6##NM_014292|CBX6|23466|chromobox homolog 6##AK313272|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AF165520|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC011739|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##NM_014508|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC021080|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##NM_152426|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D	0.024012	
chr4	63510253	63510360	reg1017305.p1	8.143	+	NM_015236	-1147468	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-1443331	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-5533738	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	1764790	-	AK307826 NM_004439 NM_182472	3025346	-	TSC_hg19_v1_chr4_-_66536182 AB209375	3025891	-	NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.442881	CTCF.p2:19:0.443
chr6	14211536	14211661	reg1011028.p1	8.143	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-93576	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-93693	+	NM_001251901	-94112	+	TSC_hg19_v1_chr6_+_15245702 AK302624	1034119	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	1034814	+	BC033996 TSC_hg19_v1_chr6_-_15248900	1037303	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.997952	CTCF.p2:-66:0.998
chr10	112155553	112155733	reg1015244.p1	8.142	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-90943	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-91050	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-169822	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	102108	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	171849	+	AF067163 TSC_hg19_v1_chr10_+_112344155	188472	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.0	
chr15	68675903	68676002	reg1015074.p1	8.141	+	TSC_hg19_v1_chr15_+_68570434 AK290167	-105528	+	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	-105859	+	CR457244 DQ891480 EU176598 BC013130 BC010849 TSC_hg19_v1_chr15_-_68522011 AK291175 AK293155 AK000568 AK027604 NM_017882	-153946	-	TSC_hg19_v1_chr15_-_68724505 AF109681 AF137378 NM_001004439 AK292445 AK304778 AK095863	48546	-	TSC_hg19_v1_chr15_+_68871402 NM_006091	195391	+	NM_001190456	232926	+	AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##CR457244|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##DQ891480|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##EU176598|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC013130|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC010849|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK291175|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK293155|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK000568|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK027604|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##NM_017882|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AF109681|ITGA11|22801|integrin, alpha 11##AF137378|ITGA11|22801|integrin, alpha 11##NM_001004439|ITGA11|22801|integrin, alpha 11##AK292445|ITGA11|22801|integrin, alpha 11##AK304778|ITGA11|22801|integrin, alpha 11##AK095863|ITGA11|22801|integrin, alpha 11##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B	0.820626	CTCF.p2:9:0.821
chr5	176988389	176988508	reg1017208.p1	8.141	+	AB067518 TSC_hg19_v1_chr5_-_176981559 NM_001190946	-6900	-	TSC_hg19_v1_chr5_-_176943963 BC015476 NM_016222	-44484	-	TSC_hg19_v1_chr5_-_176943961 AK027768 AK091774 AK315491	-44488	-	TSC_hg19_v1_chr5_+_177019199 AK313292 BC001123 NM_017510 AF441399 AK298435	30786	+	TSC_hg19_v1_chr5_+_177027143 BC007317 NM_007255 BC072403 AY358578 BC062983 AB028600 AK023506 AF142675 DQ893010 DQ896256 AB527637 AJ005382	38706	+	TSC_hg19_v1_chr5_-_177099217 AK297457	110781	-	AB067518|FAM193B|54540|family with sequence similarity 193, member B##NM_001190946|FAM193B|54540|family with sequence similarity 193, member B##BC015476|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##NM_016222|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK027768|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK091774|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK315491|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK313292|TMED9|54732|transmembrane emp24 protein transport domain containing 9##BC001123|TMED9|54732|transmembrane emp24 protein transport domain containing 9##NM_017510|TMED9|54732|transmembrane emp24 protein transport domain containing 9##AF441399|TMED9|54732|transmembrane emp24 protein transport domain containing 9##AK298435|TMED9|54732|transmembrane emp24 protein transport domain containing 9##BC007317|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##NM_007255|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC072403|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AY358578|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC062983|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AB028600|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AK023506|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF142675|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ893010|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ896256|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AJ005382|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AK297457|LOC202181|202181|chromosome 5 open reading frame 25 pseudogene	0.830069	CTCF.p2:-5:0.830
chrX	38034530	38034637	reg1015801.p1	8.141	+	NM_001163334	-141797	+	BX647688 NM_001163335 NM_138780 TSC_hg19_v1_chrX_+_37865853 AK125106	-168733	+	AF049615 NM_012274 BC104428 BC104429 BC113024 BC113025	-184503	+	TSC_hg19_v1_chrX_-_38080117 AB527644 CU676640 U61374 U78093 AK298802 AK289430 BC020684 AK293127 AK125542 NM_001170750 NM_001170751 NM_001170752 NM_006307	45542	-	X97668 CU689206 AJ238395 U57629 TSC_hg19_v1_chrX_-_38186763 BC031624 AK223491 DQ980616	152112	-	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	152212	-	NM_001163334|SYTL5|94122|synaptotagmin-like 5##BX647688|SYTL5|94122|synaptotagmin-like 5##NM_001163335|SYTL5|94122|synaptotagmin-like 5##NM_138780|SYTL5|94122|synaptotagmin-like 5##AK125106|SYTL5|94122|synaptotagmin-like 5##AF049615|CXorf27|25763|chromosome X open reading frame 27##NM_012274|CXorf27|25763|chromosome X open reading frame 27##BC104428|CXorf27|25763|chromosome X open reading frame 27##BC104429|CXorf27|25763|chromosome X open reading frame 27##BC113024|CXorf27|25763|chromosome X open reading frame 27##BC113025|CXorf27|25763|chromosome X open reading frame 27##U61374|SRPX|8406|sushi-repeat containing protein, X-linked##U78093|SRPX|8406|sushi-repeat containing protein, X-linked##AK298802|SRPX|8406|sushi-repeat containing protein, X-linked##AK289430|SRPX|8406|sushi-repeat containing protein, X-linked##BC020684|SRPX|8406|sushi-repeat containing protein, X-linked##AK293127|SRPX|8406|sushi-repeat containing protein, X-linked##AK125542|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked##NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked##X97668|RPGR|6103|retinitis pigmentosa GTPase regulator##AJ238395|RPGR|6103|retinitis pigmentosa GTPase regulator##U57629|RPGR|6103|retinitis pigmentosa GTPase regulator##BC031624|RPGR|6103|retinitis pigmentosa GTPase regulator##AK223491|RPGR|6103|retinitis pigmentosa GTPase regulator##DQ980616|RPGR|6103|retinitis pigmentosa GTPase regulator##DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator	0.960968	CTCF.p2:18:0.961
chr1	115101297	115101424	reg1019144.p1	8.140	+	TSC_hg19_v1_chr1_-_115053767 AF119043 AF220136 AF220137 NM_015906 NM_033020	-47582	-	TSC_hg19_v1_chr1_-_115053724 AB384564 AB029036	-47650	-	BC044948 NM_001253772	-404889	-	AB451245 AB451369 AB528339 AF081788 BT019390 CR542037 CU675083 DQ892529 EU176700 EU832613 EU832684 TSC_hg19_v1_chr1_-_115124237 BC005285 BC012623 BC039238 AK222637 AK313141 BC022880 AB020623 NM_005872	22883	-	TSC_hg19_v1_chr1_-_115212683 CR749576 BX647950 NM_198459	111320	-	AB527106 AK291349 AK314252 BC056678 TSC_hg19_v1_chr1_-_115238168 BC022290 M60092 AK097077 NM_000036 NM_001172626	136804	-	AF119043|TRIM33|51592|tripartite motif containing 33##AF220136|TRIM33|51592|tripartite motif containing 33##AF220137|TRIM33|51592|tripartite motif containing 33##NM_015906|TRIM33|51592|tripartite motif containing 33##NM_033020|TRIM33|51592|tripartite motif containing 33##AB029036|TRIM33|51592|tripartite motif containing 33##BC044948|SYT6|148281|synaptotagmin VI##NM_001253772|SYT6|148281|synaptotagmin VI##AB451245|BCAS2|10286|breast carcinoma amplified sequence 2##AB451369|BCAS2|10286|breast carcinoma amplified sequence 2##AF081788|BCAS2|10286|breast carcinoma amplified sequence 2##BT019390|BCAS2|10286|breast carcinoma amplified sequence 2##CR542037|BCAS2|10286|breast carcinoma amplified sequence 2##DQ892529|BCAS2|10286|breast carcinoma amplified sequence 2##EU176700|BCAS2|10286|breast carcinoma amplified sequence 2##EU832613|BCAS2|10286|breast carcinoma amplified sequence 2##EU832684|BCAS2|10286|breast carcinoma amplified sequence 2##BC005285|BCAS2|10286|breast carcinoma amplified sequence 2##BC012623|BCAS2|10286|breast carcinoma amplified sequence 2##BC039238|BCAS2|10286|breast carcinoma amplified sequence 2##AK222637|BCAS2|10286|breast carcinoma amplified sequence 2##AK313141|BCAS2|10286|breast carcinoma amplified sequence 2##BC022880|BCAS2|10286|breast carcinoma amplified sequence 2##AB020623|BCAS2|10286|breast carcinoma amplified sequence 2##NM_005872|BCAS2|10286|breast carcinoma amplified sequence 2##CR749576|DENND2C|163259|DENN/MADD domain containing 2C##BX647950|DENND2C|163259|DENN/MADD domain containing 2C##NM_198459|DENND2C|163259|DENN/MADD domain containing 2C##AK291349|AMPD1|270|adenosine monophosphate deaminase 1##AK314252|AMPD1|270|adenosine monophosphate deaminase 1##BC056678|AMPD1|270|adenosine monophosphate deaminase 1##M60092|AMPD1|270|adenosine monophosphate deaminase 1##AK097077|AMPD1|270|adenosine monophosphate deaminase 1##NM_000036|AMPD1|270|adenosine monophosphate deaminase 1##NM_001172626|AMPD1|270|adenosine monophosphate deaminase 1	0.0	
chr11	122891817	122891929	reg1016906.p1	8.139	+	AB231738 NM_001098169	-39517	-	AK097534 BC068507 NM_024806 NM_199124	-138442	+	BC070266 AK313578 AF001622 NM_019604	-182644	+	AB034951 BC016179 BC016660 BC019816 AF352832 TSC_hg19_v1_chr11_-_122932842 AK222628 AK222785 AK096100 AK129885 AK303935	40951	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	41006	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	174029	-	AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AB034951|HSPA8|3312|heat shock 70kDa protein 8##BC016179|HSPA8|3312|heat shock 70kDa protein 8##BC016660|HSPA8|3312|heat shock 70kDa protein 8##BC019816|HSPA8|3312|heat shock 70kDa protein 8##AF352832|HSPA8|3312|heat shock 70kDa protein 8##AK222628|HSPA8|3312|heat shock 70kDa protein 8##AK222785|HSPA8|3312|heat shock 70kDa protein 8##AK096100|HSPA8|3312|heat shock 70kDa protein 8##AK129885|HSPA8|3312|heat shock 70kDa protein 8##AK303935|HSPA8|3312|heat shock 70kDa protein 8##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein	0.405604	CTCF.p2:82:0.337
chr1	156289482	156289633	reg1014114.p1	8.139	+	NM_001004319	-20130	-	TSC_hg19_v1_chr1_-_156265459 BC011575	-24098	-	BC036340 AY358450 AK296157 AK075349 BC018757 NM_144580 TSC_hg19_v1_chr1_-_156265450	-24133	-	BC014605 NM_144627	17547	+	DQ893014 DQ896259 X74801 AB529021 AK316387 TSC_hg19_v1_chr1_-_156308031 AY524046 AK293477 AK300765 BC006501	18451	-	BC008019 TSC_hg19_v1_chr1_-_156308049 AK315923 AK126400	18497	-	NM_001004319|VHLL|391104|von Hippel-Lindau tumor suppressor-like##BC011575|C1orf85|112770|chromosome 1 open reading frame 85##BC036340|C1orf85|112770|chromosome 1 open reading frame 85##AY358450|C1orf85|112770|chromosome 1 open reading frame 85##AK296157|C1orf85|112770|chromosome 1 open reading frame 85##AK075349|C1orf85|112770|chromosome 1 open reading frame 85##BC018757|C1orf85|112770|chromosome 1 open reading frame 85##NM_144580|C1orf85|112770|chromosome 1 open reading frame 85##BC014605|C1orf182|128229|chromosome 1 open reading frame 182##NM_144627|C1orf182|128229|chromosome 1 open reading frame 182##DQ893014|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##DQ896259|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##X74801|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK316387|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AY524046|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK293477|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK300765|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##BC006501|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##BC008019|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK315923|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK126400|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)	0.9936	CTCF.p2:25:0.994
chr2	24283876	24283978	reg1016062.p1	8.139	+	BC002614 TSC_hg19_v1_chr2_+_24272636 D38037 S69800 S69815 L37086 AF322070	-11275	+	NM_004116 NM_054033 BC050998 TSC_hg19_v1_chr2_+_24272612	-11328	+	AK025598 TSC_hg19_v1_chr2_-_24270262 BC035698 NM_001142319 NM_025203	-13669	-	AB527769 AF401310 TSC_hg19_v1_chr2_-_24299197 AF147425 AF161523 AK000621 AK311118 AK311908	15244	-	AF151868 AF184213 BC015463 NM_016047 TSC_hg19_v1_chr2_-_24299327	15394	-	TSC_hg19_v1_chr2_+_24299447 BC039372	15544	+	BC002614|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##D38037|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##S69800|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##S69815|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##L37086|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##AF322070|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##NM_004116|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##NM_054033|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##BC050998|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##AK025598|C2orf44|80304|chromosome 2 open reading frame 44##BC035698|C2orf44|80304|chromosome 2 open reading frame 44##NM_001142319|C2orf44|80304|chromosome 2 open reading frame 44##NM_025203|C2orf44|80304|chromosome 2 open reading frame 44##AF401310|SF3B14|51639|splicing factor 3B, 14 kDa subunit##AF161523|SF3B14|51639|splicing factor 3B, 14 kDa subunit##AK000621|SF3B14|51639|splicing factor 3B, 14 kDa subunit##AK311118|SF3B14|51639|splicing factor 3B, 14 kDa subunit##AK311908|SF3B14|51639|splicing factor 3B, 14 kDa subunit##AF151868|SF3B14|51639|splicing factor 3B, 14 kDa subunit##AF184213|SF3B14|51639|splicing factor 3B, 14 kDa subunit##BC015463|SF3B14|51639|splicing factor 3B, 14 kDa subunit##NM_016047|SF3B14|51639|splicing factor 3B, 14 kDa subunit	0.861182	CTCF.p2:6:0.843
chr9	71460059	71460156	reg1015002.p1	8.139	+	CU680482 TSC_hg19_v1_chr9_+_71395147	-64991	+	TSC_hg19_v1_chr9_+_71394980 NM_138333 BC013062 AK126379 AK304099	-65156	+	TSC_hg19_v1_chr9_+_71320206 AK295587 AK292734 NM_003558	-139731	+	TSC_hg19_v1_chr9_-_71590760 AK057188	130651	-	DQ890764 DQ893927 AB463461 BC039888 NM_002732	168916	-	NM_000144 NM_001161706 NM_181425	190371	+	NM_138333|FAM122A|116224|family with sequence similarity 122A##BC013062|FAM122A|116224|family with sequence similarity 122A##AK126379|FAM122A|116224|family with sequence similarity 122A##AK295587|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##AK292734|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_003558|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##DQ890764|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##DQ893927|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##BC039888|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_002732|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_000144|FXN|2395|frataxin##NM_001161706|FXN|2395|frataxin##NM_181425|FXN|2395|frataxin	0.990318	CTCF.p2:-4:0.990
chr13	103523037	103523150	reg1015720.p1	8.138	+	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-24607	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-24839	+	TSC_hg19_v1_chr13_+_103498240 NM_000123 BC031522 AF462447	-24884	+	NM_000452 U10417	196102	-	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	2595211	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	2595498	+	BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000123|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##BC031522|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AF462447|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator	0.752937	CTCF.p2:8:0.753
chr14	74578436	74578534	reg1017027.p1	8.138	+	NM_001024674 AK307062 TSC_hg19_v1_chr14_+_74551662 AK055422 AK023979 BC009539	-26817	+	TSC_hg19_v1_chr14_-_74551167 BC032371 NM_005589	-27296	-	AF038011 TSC_hg19_v1_chr14_-_74551122 AF159889 CU678802 DQ892921 DQ893680 EU176729 AK223244 AJ249994 BC004909 AK222687 AF148505 AK312389 AK294243 AK311478	-27370	-	AY336059 NM_182894 BC128153	127711	+	BT007412 CR457104 DQ892847 DQ896094 BC012815 TSC_hg19_v1_chr14_-_74769638 AK291332 AK308382 AF009746 AK297934 BX247984 BX248053 NM_005050	191205	-	NM_018228 TSC_hg19_v1_chr14_+_74815173	236684	+	NM_001024674|LIN52|91750|lin-52 homolog (C. elegans)##AK307062|LIN52|91750|lin-52 homolog (C. elegans)##AK055422|LIN52|91750|lin-52 homolog (C. elegans)##AK023979|LIN52|91750|lin-52 homolog (C. elegans)##BC009539|LIN52|91750|lin-52 homolog (C. elegans)##BC032371|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##NM_005589|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AF038011|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AF159889|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##DQ892921|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##DQ893680|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##EU176729|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK223244|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AJ249994|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##BC004909|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK222687|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AF148505|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK312389|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK294243|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK311478|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AY336059|VSX2|338917|visual system homeobox 2##NM_182894|VSX2|338917|visual system homeobox 2##BC128153|VSX2|338917|visual system homeobox 2##BT007412|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##CR457104|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ892847|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ896094|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BC012815|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK291332|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK308382|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AF009746|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK297934|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX247984|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX248053|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_005050|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_018228|VRTN|55237|vertebrae development homolog (pig)	0.995723	CTCF.p2:-5:0.996
chr5	169232601	169232771	reg1011085.p2	8.137	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-168386	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-168442	+	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	-221965	+	AK055998 NM_001129891	175057	-	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	300285	+	BC030767 NM_001102609 BC092511	427310	+	D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58	0.0	
chr11	76630260	76630365	reg1016706.p1	8.136	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	-58319	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	-58380	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	-136035	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	115147	+	TSC_hg19_v1_chr11_+_76778017 BC018123 NM_004055 AK128124 AK313132 AK310978 AK094150 AB209087	147715	+	CU686775 BC069115 BC069365 NM_006189	183572	+	AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC018123|CAPN5|726|calpain 5##NM_004055|CAPN5|726|calpain 5##AK128124|CAPN5|726|calpain 5##AK313132|CAPN5|726|calpain 5##AK310978|CAPN5|726|calpain 5##AK094150|CAPN5|726|calpain 5##AB209087|CAPN5|726|calpain 5##BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein	0.790221	CTCF.p2:11:0.790
chr18	34389655	34389778	reg1018182.p1	8.136	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	-512002	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-622240	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-679828	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	19047	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	19178	-	AB073382 TSC_hg19_v1_chr18_-_34408948	19236	-	AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.999697	CTCF.p2:5:1.000
chr18	55526623	55526762	reg1018814.p1	8.136	+	TSC_hg19_v1_chr18_-_55470548 NM_005603	-56222	-	NM_001242804 BC040476	-229135	+	TSC_hg19_v1_chr18_-_55289034 AK293985 NM_004539	-237591	-	TSC_hg19_v1_chr18_+_55711515 NM_001144967 NM_001243960 NM_015277	184844	+	TSC_hg19_v1_chr18_+_55711771 AB071179	185092	+	DQ890913 DQ893350 AY312514 TSC_hg19_v1_chr18_+_55711911	185214	+	NM_005603|ATP8B1|5205|ATPase, aminophospholipid transporter, class I, type 8B, member 1##NM_001242804|LOC100505549|100505549|uncharacterized LOC100505549##BC040476|LOC100505549|100505549|uncharacterized LOC100505549##AK293985|NARS|4677|asparaginyl-tRNA synthetase##NM_004539|NARS|4677|asparaginyl-tRNA synthetase##NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001243960|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB071179|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.0	
chr1	235267606	235267746	reg1017059.p1	8.135	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-371902	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-522430	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-523818	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	24413	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	24555	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	56887	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.998699	CTCF.p2:2:0.999
chr2	205010083	205010203	reg1015744.p1	8.135	+	AK314985 AJ277832 NM_012092 BC028006 BC028210 AB023135 AF218312 CU688368 CU688430	-208649	+	BC070162 AF414120 NM_001037631 NM_005214 AK313732 BC069566 BC074893 BC074842 AB590653 AF486806 AY209009 AY792514 AY999702 DQ785106 L15006	-277556	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	-438744	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	400347	+	TSC_hg19_v1_chr2_+_205410560 AX765687 AX765741 AK056157	400451	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	400576	+	AK314985|ICOS|29851|inducible T-cell co-stimulator##AJ277832|ICOS|29851|inducible T-cell co-stimulator##NM_012092|ICOS|29851|inducible T-cell co-stimulator##BC028006|ICOS|29851|inducible T-cell co-stimulator##BC028210|ICOS|29851|inducible T-cell co-stimulator##AB023135|ICOS|29851|inducible T-cell co-stimulator##BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK056157|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)	0.99502	CTCF.p2:-2:0.995
chr7	44080236	44080349	reg1017484.p1	8.135	+	TSC_hg19_v1_chr7_+_44078680 BC081571 BC024303	-1543	+	TSC_hg19_v1_chr7_-_44058749 BC062722 BX537878 BX538054 BC017341 BC017250 BC105584 AK296066	-21515	-	AF412027 NM_175064	-39805	+	NM_001014436 NM_001122956 NM_014063 TSC_hg19_v1_chr7_+_44084271 AK293279 AK293698	3967	+	TSC_hg19_v1_chr7_+_44084300 AF077353 AK293151 AK296778 AK298102 AK302037 AF218020	4003	+	AK293340 TSC_hg19_v1_chr7_+_44084309 AK027367 BC011677	4018	+	BC081571|FLJ35390|255031|uncharacterized LOC255031##BC024303|FLJ35390|255031|uncharacterized LOC255031##BC062722|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BX537878|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BX538054|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC017341|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC017250|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC105584|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##AK296066|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##AF412027|SPDYE1|285955|speedy homolog E1 (Xenopus laevis)##NM_175064|SPDYE1|285955|speedy homolog E1 (Xenopus laevis)##NM_001014436|DBNL|28988|drebrin-like##NM_001122956|DBNL|28988|drebrin-like##NM_014063|DBNL|28988|drebrin-like##AK293279|DBNL|28988|drebrin-like##AK293698|DBNL|28988|drebrin-like##AF077353|DBNL|28988|drebrin-like##AK293151|DBNL|28988|drebrin-like##AK296778|DBNL|28988|drebrin-like##AK298102|DBNL|28988|drebrin-like##AK302037|DBNL|28988|drebrin-like##AF218020|DBNL|28988|drebrin-like##AK293340|DBNL|28988|drebrin-like##AK027367|DBNL|28988|drebrin-like##BC011677|DBNL|28988|drebrin-like	0.155716	
chr9	67926450	67926555	reg1015530.p1	8.135	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-1373227	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-1432306	-	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	-1468006	-	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	314	+	TSC_hg19_v1_chr9_+_68726468 AK311167	800000	+	TSC_hg19_v1_chr9_+_69065493 AK311167	1139036	+	BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene	0.757079	CTCF.p2:-17:0.757
chr9	134631131	134631232	reg1013218.p2	8.134	+	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	-15891	-	D21239 NM_005312	-18257	-	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	-45979	-	Z36848 AF104252 AF230382 DQ099387 AB527898 EU446747 TSC_hg19_v1_chr9_-_134955238 BC064608 BC070331	323968	-	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	324069	-	TSC_hg19_v1_chr9_+_135037083 AY358165	405910	+	EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##Z36848|MED27|9442|mediator complex subunit 27##AF104252|MED27|9442|mediator complex subunit 27##AF230382|MED27|9442|mediator complex subunit 27##DQ099387|MED27|9442|mediator complex subunit 27##EU446747|MED27|9442|mediator complex subunit 27##BC064608|MED27|9442|mediator complex subunit 27##BC070331|MED27|9442|mediator complex subunit 27##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AY358165|NTNG2|84628|netrin G2	0.354773	CTCF.p2:-8:0.355
chr9	1869999	1870138	reg1016582.p1	8.134	+	AF130729 NM_181872	-819459	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-819698	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-819724	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	145228	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	751739	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	752006	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.861138	CTCF.p2:2:0.861
chr13	108994861	108994978	reg1017692.p1	8.133	+	DQ857728 TSC_hg19_v1_chr13_+_108955871	-39102	+	TSC_hg19_v1_chr13_+_108922564 AY129227 AY129228	-72275	+	AY129226 TSC_hg19_v1_chr13_+_108922483	-72434	+	AB020672 BC146791 NM_015011 AL834447	253595	+	AB290159 AK127806 NM_001198950	286650	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	1443989	-	AY129227|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AY129228|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AY129226|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2	0.826394	CTCF.p2:-11:0.826
chr9	32589212	32589333	reg1019062.p1	8.133	+	CR456920 TSC_hg19_v1_chr9_-_32573139 AF035840 BC029247 AK289702 AF067167 BC009801 NM_001199987 NM_002493 NM_182739	-16150	-	TSC_hg19_v1_chr9_-_32552585 NM_001195622 NM_005802	-36670	-	AB045732 AB045733 AF098300 TSC_hg19_v1_chr9_-_32552567 BC060884	-36713	-	BC116181 BC116182 AF390562 NM_153809	46368	-	AK125320 NM_212558 BX647550	194244	+	AY208839 AY208836 AY208835 AY208833 NM_001195249 AK131046 AB528955 TSC_hg19_v1_chr9_-_33001627 AY208831 AY208837 AY208834 NM_001195254 AY040777 AY208829 AY208832 BC068107 AY208840 AJ565850 AJ565851 AJ565852 BX538161 AK055672 AY208830 NM_001195248 NM_001195250 NM_001195251 NM_001195252 NM_175069 NM_175073	412306	-	CR456920|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AF035840|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC029247|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AK289702|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AF067167|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC009801|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_001199987|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_002493|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_182739|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_001195622|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##NM_005802|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AB045732|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AB045733|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AF098300|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##BC060884|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##BC116181|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##BC116182|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##AF390562|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##NM_153809|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##AK125320|TMEM215|401498|transmembrane protein 215##NM_212558|TMEM215|401498|transmembrane protein 215##BX647550|TMEM215|401498|transmembrane protein 215##AY208839|APTX|54840|aprataxin##AY208836|APTX|54840|aprataxin##AY208835|APTX|54840|aprataxin##AY208833|APTX|54840|aprataxin##NM_001195249|APTX|54840|aprataxin##AK131046|APTX|54840|aprataxin##AY208831|APTX|54840|aprataxin##AY208837|APTX|54840|aprataxin##AY208834|APTX|54840|aprataxin##NM_001195254|APTX|54840|aprataxin##AY040777|APTX|54840|aprataxin##AY208829|APTX|54840|aprataxin##AY208832|APTX|54840|aprataxin##BC068107|APTX|54840|aprataxin##AY208840|APTX|54840|aprataxin##AJ565850|APTX|54840|aprataxin##AJ565851|APTX|54840|aprataxin##AJ565852|APTX|54840|aprataxin##BX538161|APTX|54840|aprataxin##AK055672|APTX|54840|aprataxin##AY208830|APTX|54840|aprataxin##NM_001195248|APTX|54840|aprataxin##NM_001195250|APTX|54840|aprataxin##NM_001195251|APTX|54840|aprataxin##NM_001195252|APTX|54840|aprataxin##NM_175069|APTX|54840|aprataxin##NM_175073|APTX|54840|aprataxin	0.514369	CTCF.p2:-6:0.514
chrX	115004641	115004743	reg1006736.p2	8.133	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-176824	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-207650	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-209086	+	BC003645 TSC_hg19_v1_chrX_-_115085443	80747	-	AK313927 NM_000686 X87723 U16957	297303	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	563075	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr11	120382370	120382472	reg1000505.p2	8.132	+	BC063117 NM_001198665 NM_015313	-174804	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	-175317	+	AK096207 AK304086 TSC_hg19_v1_chr11_+_120196007 AK289680 AK294713 BC015232	-186403	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	44	+	AB384776 NM_014619 S67803	148606	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	512389	+	BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK096207|TMEM136|219902|transmembrane protein 136##AK304086|TMEM136|219902|transmembrane protein 136##AK289680|TMEM136|219902|transmembrane protein 136##AK294713|TMEM136|219902|transmembrane protein 136##BC015232|TMEM136|219902|transmembrane protein 136##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like	0.0	
chr12	46384470	46384610	reg1017810.p1	8.132	+	TSC_hg19_v1_chr12_-_46384378 NM_004719	-115	-	AK096682 TSC_hg19_v1_chr12_-_46384348 AF030234	-193	-	TSC_hg19_v1_chr12_-_46384319 AK302999	-215	-	TSC_hg19_v1_chr12_-_46385857 AK026473	1335	-	AK074851 CU679761 DQ891017 EU176550 AK074949 AK313731 TSC_hg19_v1_chr12_-_46633674	249073	-	TSC_hg19_v1_chr12_-_46662567 AF247166	278026	-	NM_004719|SCAF11|9169|SR-related CTD-associated factor 11##AK096682|SCAF11|9169|SR-related CTD-associated factor 11##AF030234|SCAF11|9169|SR-related CTD-associated factor 11##AK302999|SCAF11|9169|SR-related CTD-associated factor 11##AK026473|SCAF11|9169|SR-related CTD-associated factor 11##AK074851|SLC38A1|81539|solute carrier family 38, member 1##DQ891017|SLC38A1|81539|solute carrier family 38, member 1##EU176550|SLC38A1|81539|solute carrier family 38, member 1##AK074949|SLC38A1|81539|solute carrier family 38, member 1##AK313731|SLC38A1|81539|solute carrier family 38, member 1##AF247166|SLC38A1|81539|solute carrier family 38, member 1	0.537649	CTCF.p2:0:0.538
chr20	53266108	53266248	reg1019761.p1	8.132	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-173964	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	-441541	+	TSC_hg19_v1_chr20_+_52824396 NM_002623	-441731	+	NM_080617	1313833	-	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	1557609	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	1667846	+	BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##NM_002623|PFDN4|5203|prefoldin subunit 4##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B	0.999952	CTCF.p2:-7:1.000
chr3	139939027	139939149	reg1016483.p2	8.132	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-284836	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-285070	+	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	-542260	-	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	457871	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	721679	+	TSC_hg19_v1_chr3_+_140770412 BC051354	831390	+	AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.970233	CTCF.p2:-1:0.970
chr3	57134252	57134394	reg1017033.p1	8.132	+	AF433662 AK302493 NM_001128615	-21010	-	AY221117 NM_181727 BC126274 BC136498	-39820	+	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	-298412	-	AF458067 TSC_hg19_v1_chr3_-_57199347	65010	-	AF494208 NM_017563 TSC_hg19_v1_chr3_-_57199413	65087	-	NM_003865	99956	-	AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12##AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF458067|IL17RD|54756|interleukin 17 receptor D##AF494208|IL17RD|54756|interleukin 17 receptor D##NM_017563|IL17RD|54756|interleukin 17 receptor D##NM_003865|HESX1|8820|HESX homeobox 1	0.99538	CTCF.p2:-3:0.995
chr1	48575220	48575340	reg1017256.p1	8.131	+	NM_001194986	-112719	-	AF042832 NM_004474	-673592	+	AF275722 NM_012186	-693537	+	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	113112	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	362398	-	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	362565	-	NM_001194986|LOC388630|388630|UPF0632 protein A##AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6	0.997214	CTCF.p2:-15:0.997
chr17	7920155	7920268	reg1014502.p1	8.131	+	DQ426876 NM_000180 M92432	-14260	+	NM_001037144 NM_053051 AY160226 AY160227 TSC_hg19_v1_chr17_+_7835522 AK293076 AF331638 BC021134 AL833907	-84682	+	AB528455 DQ890860 DQ894015 BC025413 TSC_hg19_v1_chr17_-_7835265 BC032717 AK314038 NM_021210 NM_001166621	-84951	-	AK298095 NM_001039130 NM_001039131 NM_001141 AK292779 AK300554 BC063647 U78294 BC035217 BC033294 AB590334 DQ891345 EU176579 AF468051 AF468052 AF468053 AF468054	22201	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	39991	+	TSC_hg19_v1_chr17_+_7982776 AK096086 BC046191	62564	+	NM_000180|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##M92432|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##NM_001037144|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##NM_053051|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160226|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160227|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AK293076|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AF331638|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##BC021134|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AL833907|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##DQ890860|TRAPPC1|58485|trafficking protein particle complex 1##DQ894015|TRAPPC1|58485|trafficking protein particle complex 1##BC025413|TRAPPC1|58485|trafficking protein particle complex 1##BC032717|TRAPPC1|58485|trafficking protein particle complex 1##AK314038|TRAPPC1|58485|trafficking protein particle complex 1##NM_021210|TRAPPC1|58485|trafficking protein particle complex 1##NM_001166621|TRAPPC1|58485|trafficking protein particle complex 1##AK298095|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039130|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039131|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001141|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK292779|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK300554|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC063647|ALOX15B|247|arachidonate 15-lipoxygenase, type B##U78294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC035217|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC033294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##DQ891345|ALOX15B|247|arachidonate 15-lipoxygenase, type B##EU176579|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468051|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468052|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468053|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468054|ALOX15B|247|arachidonate 15-lipoxygenase, type B	0.747391	CTCF.p2:-15:0.747
chr1	152467697	152467811	reg1016249.p2	8.130	+	AF077831 AK291301 AK298640 AK316568 BC030807 NM_016190	-81016	-	AY827490 NM_001014342	-135273	-	L01090 NM_002016	-170076	-	NM_178438	15565	+	AJ243662 NM_019060	19223	+	BC131716 NM_178435	71483	-	AF077831|CRNN|49860|cornulin##AK291301|CRNN|49860|cornulin##AK298640|CRNN|49860|cornulin##AK316568|CRNN|49860|cornulin##BC030807|CRNN|49860|cornulin##NM_016190|CRNN|49860|cornulin##AY827490|FLG2|388698|filaggrin family member 2##NM_001014342|FLG2|388698|filaggrin family member 2##L01090|FLG|2312|filaggrin##NM_002016|FLG|2312|filaggrin##NM_178438|LCE5A|254910|late cornified envelope 5A##AJ243662|CRCT1|54544|cysteine-rich C-terminal 1##NM_019060|CRCT1|54544|cysteine-rich C-terminal 1##BC131716|LCE3E|353145|late cornified envelope 3E##NM_178435|LCE3E|353145|late cornified envelope 3E	0.503655	CTCF.p2:-4:0.504
chr19	30277230	30277352	reg1018523.p1	8.130	+	TSC_hg19_v1_chr19_-_30206402 NM_031448	-70869	-	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	-71199	-	TSC_hg19_v1_chr19_+_30156375 AK225814	-120870	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	25610	+	BC026184 NM_001252641	137259	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	155991	+	NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone	0.974883	CTCF.p2:-11:0.975
chr22	38057225	38057330	reg1016204.p1	8.130	+	TSC_hg19_v1_chr22_+_38054751 BC064922 NM_020315 BC000320 BC018844 AY125047	-2532	+	TSC_hg19_v1_chr22_+_38035718 CR456576 AB463257 CU013175 CU013463	-21518	+	TSC_hg19_v1_chr22_+_38035696 AK301163	-21573	+	CR456511 NM_002305 EU363770 AK312161 BC020675 TSC_hg19_v1_chr22_+_38071644 AL832117 D28452 BC001693 AB097036 J04456 X15256 X14829	14380	+	TSC_hg19_v1_chr22_+_38082360 NM_024313 AK057139 AK294700 AK316443 BC002808 AK310084 AL160132 CR456463 AB528193 CU012996 CU013284 DQ278603	25098	+	NM_001039141 TSC_hg19_v1_chr22_+_38093008 AK096634	35725	+	BC064922|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##NM_020315|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##BC000320|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##BC018844|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##AY125047|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##CR456576|SH3BP1|23616|SH3-domain binding protein 1##CU013175|SH3BP1|23616|SH3-domain binding protein 1##CU013463|SH3BP1|23616|SH3-domain binding protein 1##AK301163|SH3BP1|23616|SH3-domain binding protein 1##CR456511|LGALS1|3956|lectin, galactoside-binding, soluble, 1##NM_002305|LGALS1|3956|lectin, galactoside-binding, soluble, 1##EU363770|LGALS1|3956|lectin, galactoside-binding, soluble, 1##AK312161|LGALS1|3956|lectin, galactoside-binding, soluble, 1##BC020675|LGALS1|3956|lectin, galactoside-binding, soluble, 1##AL832117|LGALS1|3956|lectin, galactoside-binding, soluble, 1##D28452|LGALS1|3956|lectin, galactoside-binding, soluble, 1##BC001693|LGALS1|3956|lectin, galactoside-binding, soluble, 1##AB097036|LGALS1|3956|lectin, galactoside-binding, soluble, 1##J04456|LGALS1|3956|lectin, galactoside-binding, soluble, 1##X15256|LGALS1|3956|lectin, galactoside-binding, soluble, 1##X14829|LGALS1|3956|lectin, galactoside-binding, soluble, 1##NM_024313|NOL12|79159|nucleolar protein 12##AK057139|NOL12|79159|nucleolar protein 12##AK294700|NOL12|79159|nucleolar protein 12##AK316443|NOL12|79159|nucleolar protein 12##BC002808|NOL12|79159|nucleolar protein 12##AL160132|NOL12|79159|nucleolar protein 12##CR456463|NOL12|79159|nucleolar protein 12##NM_001039141|TRIOBP|11078|TRIO and F-actin binding protein##AK096634|TRIOBP|11078|TRIO and F-actin binding protein	0.026486	
chr2	87379090	87379230	reg1018723.p1	8.130	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	-75828	-	BC107767 BC109248 BC070296 BC005379 NM_001032392 M93143 NM_002665 BC022294	-130202	-	CR749330 NM_001024457	-234423	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	375857	+	TSC_hg19_v1_chr2_+_87755060 AK312010	375900	+	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	668459	+	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC107767|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC022294|PLGLB2|5342|plasminogen-like B2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1	0.994433	CTCF.p2:0:0.994
chr2	207125163	207125272	reg1016432.p1	8.129	+	AK312917 BC067833 AK290976 NM_001098199 NM_005279	-42519	-	TSC_hg19_v1_chr2_+_207024617 AK291910 AK310096 D28350 BC067787 BC029316 BC004931 AB529032 CU688340 BT007079 CR456825	-100559	+	S81522 X60656 TSC_hg19_v1_chr2_+_207024348 BC000211 X60489	-100818	+	TSC_hg19_v1_chr2_+_207139414 AK127271 NM_020923	14250	+	TSC_hg19_v1_chr2_+_207308286 AB009672 NM_003812 BC132763 BC132765	183116	+	AK129906 TSC_hg19_v1_chr2_+_207406857	281619	+	AK312917|GPR1|2825|G protein-coupled receptor 1##BC067833|GPR1|2825|G protein-coupled receptor 1##AK290976|GPR1|2825|G protein-coupled receptor 1##NM_001098199|GPR1|2825|G protein-coupled receptor 1##NM_005279|GPR1|2825|G protein-coupled receptor 1##AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##D28350|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##S81522|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##X60656|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC000211|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##X60489|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##AK127271|ZDBF2|57683|zinc finger, DBF-type containing 2##NM_020923|ZDBF2|57683|zinc finger, DBF-type containing 2##AB009672|ADAM23|8745|ADAM metallopeptidase domain 23##NM_003812|ADAM23|8745|ADAM metallopeptidase domain 23##BC132763|ADAM23|8745|ADAM metallopeptidase domain 23##BC132765|ADAM23|8745|ADAM metallopeptidase domain 23##AK129906|ADAM23|8745|ADAM metallopeptidase domain 23	0.586662	CTCF.p2:-1:0.523
chr2	236015877	236016016	reg1018395.p1	8.129	+	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	-155288	+	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	-610227	-	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-1056559	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	386857	+	TSC_hg19_v1_chr2_+_236402950 BC140856	387031	+	TSC_hg19_v1_chr2_+_236403297 AB384114 AF413078	387364	+	BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AF413078|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.626874	CTCF.p2:12:0.627
chr1	64380927	64381039	reg1016574.p1	8.128	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	-141324	+	NM_001172818 AK300100	-292090	+	AK293298 NM_001172819 AK298505	-321469	+	BC029895 NM_152489	288506	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	555535	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	829816	+	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_020925|CACHD1|57685|cache domain containing 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2	0.989068	CTCF.p2:14:0.989
chr4	90148233	90148374	reg1018993.p1	8.128	+	AK027653 NM_145715	-114336	+	AK091881 AX747234 TSC_hg19_v1_chr4_-_90032571	-115744	-	CU687656 BC063126 BC041029 BC053569 BX647410 NM_014883	-170084	-	AK124616 TSC_hg19_v1_chr4_-_90228950	80648	-	TSC_hg19_v1_chr4_-_90229171 NM_198281	80854	-	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	609939	-	AK027653|TIGD2|166815|tigger transposable element derived 2##NM_145715|TIGD2|166815|tigger transposable element derived 2##AK091881|FAM13A|10144|family with sequence similarity 13, member A##BC063126|FAM13A|10144|family with sequence similarity 13, member A##BC041029|FAM13A|10144|family with sequence similarity 13, member A##BC053569|FAM13A|10144|family with sequence similarity 13, member A##BX647410|FAM13A|10144|family with sequence similarity 13, member A##NM_014883|FAM13A|10144|family with sequence similarity 13, member A##AK124616|GPRIN3|285513|GPRIN family member 3##NM_198281|GPRIN3|285513|GPRIN family member 3##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)	0.999248	CTCF.p2:-5:0.999
chr3	99508316	99508478	reg1018926.p1	8.127	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	-150947	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-887905	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-1056810	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	28348	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	86594	-	BC017987 NM_001042459 NM_182909 AF329092 AX776292	324955	-	AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like	0.129914	
chrX	111112926	111113075	reg1018093.p1	8.127	+	NM_001039210 NM_001099922 NM_001168385 NM_018466 TSC_hg19_v1_chrX_+_110924425 AK300394 AK302729 AK311608 AK312229 BC005336 AF220051 AK316306 AK316522 AK304712 AK302890	-188581	+	AF040254 AF040255 TSC_hg19_v1_chrX_-_110655421 BC027925 AK290455 AK299822 NM_178151 NM_001195553 NM_178152 NM_178153	-457579	-	AJ003112 NM_000555	-458627	-	NM_001195576 NM_001195578	6352	+	BC034811 NM_001195577	12124	+	AF054568 NM_012471	213003	-	NM_001039210|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_001099922|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_001168385|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_018466|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK300394|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK302729|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK311608|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK312229|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##BC005336|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AF220051|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK316306|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK316522|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK304712|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK302890|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AF040254|DCX|1641|doublecortin##AF040255|DCX|1641|doublecortin##BC027925|DCX|1641|doublecortin##AK290455|DCX|1641|doublecortin##AK299822|DCX|1641|doublecortin##NM_178151|DCX|1641|doublecortin##NM_001195553|DCX|1641|doublecortin##NM_178152|DCX|1641|doublecortin##NM_178153|DCX|1641|doublecortin##AJ003112|DCX|1641|doublecortin##NM_000555|DCX|1641|doublecortin##NM_001195576|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195578|LOC100329135|100329135|uncharacterized LOC100329135##BC034811|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195577|LOC100329135|100329135|uncharacterized LOC100329135##AF054568|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##NM_012471|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5	0.628363	CTCF.p2:-15:0.454
chr11	46028111	46028218	reg1016207.p2	8.125	+	TSC_hg19_v1_chr11_+_45944226 BC037291	-83948	+	AK055829 AK096021 NM_152312	-84981	+	TSC_hg19_v1_chr11_-_45939595 AF118240 NM_004813 NM_057174	-88544	-	TSC_hg19_v1_chr11_-_46142986 AK023258 NM_001101802 NM_016621	114833	-	TSC_hg19_v1_chr11_+_46299212 AK314072 NM_052854	271041	+	BC014097 TSC_hg19_v1_chr11_+_46299557 BC015781 AB063321	271396	+	BC037291|GYLTL1B|120071|glycosyltransferase-like 1B##AK055829|GYLTL1B|120071|glycosyltransferase-like 1B##AK096021|GYLTL1B|120071|glycosyltransferase-like 1B##NM_152312|GYLTL1B|120071|glycosyltransferase-like 1B##AF118240|PEX16|9409|peroxisomal biogenesis factor 16##NM_004813|PEX16|9409|peroxisomal biogenesis factor 16##NM_057174|PEX16|9409|peroxisomal biogenesis factor 16##AK023258|PHF21A|51317|PHD finger protein 21A##NM_001101802|PHF21A|51317|PHD finger protein 21A##NM_016621|PHF21A|51317|PHD finger protein 21A##AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	0.882026	CTCF.p2:9:0.882
chr12	63497454	63497603	reg1014946.p1	8.125	+	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	-168603	-	TSC_hg19_v1_chr12_-_63328666 NM_020700 BC157843	-168823	-	BC136288 AK098456 NM_175895	-500318	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	47143	-	NM_000706	49061	-	BC125215 BC125216 TSC_hg19_v1_chr12_-_64062283 AY358792 AL833344 AK310102 AK057511 BC068442 NM_173812	564768	-	BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##NM_020700|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC157843|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC136288|C12orf61|283416|chromosome 12 open reading frame 61##AK098456|C12orf61|283416|chromosome 12 open reading frame 61##NM_175895|C12orf61|283416|chromosome 12 open reading frame 61##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A##NM_000706|AVPR1A|552|arginine vasopressin receptor 1A##BC125215|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC125216|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AY358792|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AL833344|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK310102|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK057511|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC068442|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_173812|DPY19L2|283417|dpy-19-like 2 (C. elegans)	0.378611	CTCF.p2:-16:0.379
chr13	36295194	36295319	reg1017151.p2	8.125	+	AK294737 NM_001204197 TSC_hg19_v1_chr13_+_36050945 AK315939	-244331	+	BC028170 AB593021 TSC_hg19_v1_chr13_-_36050827 AB593022 AK313185 AB073388 NM_005584	-244460	-	TSC_hg19_v1_chr13_+_35516429 NM_015678 AF467288	-778798	+	AK299059 AK311183 AK295777 TSC_hg19_v1_chr13_-_36429805 CR627093 AK308925 AK311434 AK311438 AK311195 NM_001195415 NM_001195416 NM_001195430	134641	-	TSC_hg19_v1_chr13_-_36705434 AB002367 BC152456	410181	-	AK295102 TSC_hg19_v1_chr13_-_36705468	410217	-	AK294737|NBEA|26960|neurobeachin##NM_001204197|NBEA|26960|neurobeachin##AK315939|NBEA|26960|neurobeachin##BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_015678|NBEA|26960|neurobeachin##AF467288|NBEA|26960|neurobeachin##AK299059|DCLK1|9201|doublecortin-like kinase 1##AK311183|DCLK1|9201|doublecortin-like kinase 1##AK295777|DCLK1|9201|doublecortin-like kinase 1##CR627093|DCLK1|9201|doublecortin-like kinase 1##AK308925|DCLK1|9201|doublecortin-like kinase 1##AK311434|DCLK1|9201|doublecortin-like kinase 1##AK311438|DCLK1|9201|doublecortin-like kinase 1##AK311195|DCLK1|9201|doublecortin-like kinase 1##NM_001195415|DCLK1|9201|doublecortin-like kinase 1##NM_001195416|DCLK1|9201|doublecortin-like kinase 1##NM_001195430|DCLK1|9201|doublecortin-like kinase 1##AB002367|DCLK1|9201|doublecortin-like kinase 1##BC152456|DCLK1|9201|doublecortin-like kinase 1##AK295102|DCLK1|9201|doublecortin-like kinase 1	0.999324	CTCF.p2:10:0.999
chr6	128649275	128649390	reg1017820.p1	8.125	+	AK124031 NM_001164687	-409574	-	AK292046 AK097903 BC144034 BC130516 NM_001010923 NM_001164685	-427132	-	AK303850 BC062712 NM_001010905	-751014	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	192324	-	NM_000426 NM_001079823 Z26653	554981	+	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	1381994	-	AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##AK292046|THEMIS|387357|thymocyte selection associated##AK097903|THEMIS|387357|thymocyte selection associated##BC144034|THEMIS|387357|thymocyte selection associated##BC130516|THEMIS|387357|thymocyte selection associated##NM_001010923|THEMIS|387357|thymocyte selection associated##NM_001164685|THEMIS|387357|thymocyte selection associated##AK303850|C6orf58|352999|chromosome 6 open reading frame 58##BC062712|C6orf58|352999|chromosome 6 open reading frame 58##NM_001010905|C6orf58|352999|chromosome 6 open reading frame 58##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18	0.992616	CTCF.p2:3:0.993
chr6_dbb_hap3	4397283	4397409	reg1019242.p1	8.125	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.915682	CTCF.p2:0:0.916
chr1	120925987	120926106	reg1016734.p2	8.124	+	NM_001100910	-87042	+	TSC_hg19_v1_chr1_-_120612318 NM_001200001 NM_024408	-313731	-	TSC_hg19_v1_chr1_-_120612272 BC071562	-313780	-	L03419 L03420 TSC_hg19_v1_chr1_-_120935918 BC110416 AK308886	9863	-	AK291502 AK307244 AK311502 NM_001004340 NM_001017986 NM_001244910 TSC_hg19_v1_chr1_-_120935945	9906	-	CR936796 TSC_hg19_v1_chr1_+_142618815 AK056396 AF277188	21692800	+	NM_001100910|FAM72B|653820|family with sequence similarity 72, member B##NM_001200001|NOTCH2|4853|notch 2##NM_024408|NOTCH2|4853|notch 2##BC071562|NOTCH2|4853|notch 2##L03419|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##L03420|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##BC110416|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK308886|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK291502|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK307244|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK311502|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001004340|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001017986|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001244910|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)	0.0	
chr11	22692483	22692616	reg1017037.p1	8.124	+	BC013326 BC040470 NM_177553	-2896	+	TSC_hg19_v1_chr11_+_22688156 NM_001143830 AK313734	-4391	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	-45188	-	NM_005256 TSC_hg19_v1_chr11_+_22696327 U95032	3787	+	TSC_hg19_v1_chr11_+_22696382 CU680566 AB590780 CR450285	3849	+	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	158796	-	BC013326|GAS2|2620|growth arrest-specific 2##BC040470|GAS2|2620|growth arrest-specific 2##NM_177553|GAS2|2620|growth arrest-specific 2##NM_001143830|GAS2|2620|growth arrest-specific 2##AK313734|GAS2|2620|growth arrest-specific 2##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F##NM_005256|GAS2|2620|growth arrest-specific 2##U95032|GAS2|2620|growth arrest-specific 2##CR450285|GAS2|2620|growth arrest-specific 2##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein	0.17618	
chr19	9422868	9422975	reg1016754.p1	8.124	+	BC109267 BC109268 NM_198535 EU446770	-7127	-	BC146920 NM_001079935	-61259	+	BC137147 BC137162 NM_001005191	-97375	-	NM_001202406 NM_001202407 NM_001202408 NM_001202409 NM_001202410 NM_001202411 NM_032497	11526	+	AK027700 AK308517 AK309952 AK310117 AK092348 AX747491 TSC_hg19_v1_chr19_+_9434880 AK056489 AK310020 AK310781 AK298169 NM_001172650 NM_001202412 BC006436 AL389938 BC034489	12014	+	NM_001202425 U37251	12464	+	BC109267|ZNF699|374879|zinc finger protein 699##BC109268|ZNF699|374879|zinc finger protein 699##NM_198535|ZNF699|374879|zinc finger protein 699##EU446770|ZNF266|10781|zinc finger protein 266##BC146920|OR7E24|26648|olfactory receptor, family 7, subfamily E, member 24##NM_001079935|OR7E24|26648|olfactory receptor, family 7, subfamily E, member 24##BC137147|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4##BC137162|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4##NM_001005191|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4##NM_001202406|ZNF559|84527|zinc finger protein 559##NM_001202407|ZNF559|84527|zinc finger protein 559##NM_001202408|ZNF559|84527|zinc finger protein 559##NM_001202409|ZNF559|84527|zinc finger protein 559##NM_001202410|ZNF559|84527|zinc finger protein 559##NM_001202411|ZNF559|84527|zinc finger protein 559##NM_032497|ZNF559|84527|zinc finger protein 559##AK027700|ZNF559|84527|zinc finger protein 559##AK308517|ZNF559|84527|zinc finger protein 559##AK309952|ZNF559|84527|zinc finger protein 559##AK310117|ZNF559|84527|zinc finger protein 559##AK092348|ZNF559|84527|zinc finger protein 559##AK056489|ZNF559|84527|zinc finger protein 559##AK310020|ZNF559|84527|zinc finger protein 559##AK310781|ZNF559|84527|zinc finger protein 559##AK298169|ZNF559|84527|zinc finger protein 559##NM_001172650|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough##NM_001202412|ZNF559|84527|zinc finger protein 559##BC006436|ZNF559|84527|zinc finger protein 559##AL389938|ZNF559|84527|zinc finger protein 559##BC034489|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough##NM_001202425|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough##U37251|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough	0.945894	CTCF.p2:-4:0.946
chr4	27050095	27050211	reg1014990.p1	8.124	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-187613	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-464473	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-558168	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3671846	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3672041	+	TSC_hg19_v1_chr4_+_30722465 AB006756	3672306	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.995205	CTCF.p2:-6:0.995
chr8	29177979	29178126	reg1018765.p1	8.124	+	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-57438	-	TSC_hg19_v1_chr8_+_28748135 AY522342 DQ269478 BC069242 NM_024567	-429925	+	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	-430135	+	AL137704 NM_057158	28269	-	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	30018	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	762422	-	BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AY522342|HMBOX1|79618|homeobox containing 1##DQ269478|HMBOX1|79618|homeobox containing 1##BC069242|HMBOX1|79618|homeobox containing 1##NM_024567|HMBOX1|79618|homeobox containing 1##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66	0.025754	
chr15	65393995	65394118	reg1016128.p1	8.123	+	NM_001101362	-24903	+	BC053734 TSC_hg19_v1_chr15_-_65360332 NM_016563	-33714	-	CU691030 AK314914 AK296261 TSC_hg19_v1_chr15_-_65360286 AF233588	-33825	-	BC127916 NM_001163692	4581	-	BT007395 BC016992 TSC_hg19_v1_chr15_-_65412291	18177	-	TSC_hg19_v1_chr15_-_65426147 AK225816 AK303203 BC131704 AK096970 BC092464 NM_005707	31874	-	NM_001101362|KBTBD13|390594|kelch repeat and BTB (POZ) domain containing 13##BC053734|RASL12|51285|RAS-like, family 12##NM_016563|RASL12|51285|RAS-like, family 12##AK314914|RASL12|51285|RAS-like, family 12##AK296261|RASL12|51285|RAS-like, family 12##AF233588|RASL12|51285|RAS-like, family 12##BC127916|UBAP1L|390595|ubiquitin associated protein 1-like##NM_001163692|UBAP1L|390595|ubiquitin associated protein 1-like##BT007395|PDCD7|10081|programmed cell death 7##BC016992|PDCD7|10081|programmed cell death 7##AK225816|PDCD7|10081|programmed cell death 7##AK303203|PDCD7|10081|programmed cell death 7##BC131704|PDCD7|10081|programmed cell death 7##AK096970|PDCD7|10081|programmed cell death 7##BC092464|PDCD7|10081|programmed cell death 7##NM_005707|PDCD7|10081|programmed cell death 7	0.153005	
chr16	12189147	12189312	reg1016234.p1	8.123	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-118656	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-130145	+	NM_001130007	-178711	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	708422	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	708490	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	806239	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.998977	CTCF.p2:-6:0.999
chr17	65624697	65624833	reg1010545.p1	8.123	+	BC007905 NM_012417 NM_181671	-250842	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-251177	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-251356	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	89285	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	196937	+	AK293224 TSC_hg19_v1_chr17_+_65822221	197452	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.200863	CTCF.p2:0:0.201
chr4	143048182	143048325	reg1016542.p2	8.123	+	AK290619 NM_000585 NM_172175 BC018149 U14407	-490487	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-906167	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-906198	+	NM_001101669 NM_003866	719350	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	1057811	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	1057872	+	AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38	0.77128	CTCF.p2:-21:0.771
chr15	65693757	65693901	reg1016599.p2	8.122	+	BC042054 TSC_hg19_v1_chr15_-_65670341 BC067107 NM_004884	-23478	-	BC006389 NM_017851 TSC_hg19_v1_chr15_-_65579223 AK000516	-114669	-	BC035776 AF035408 AY358904 AK225652 AK225926 AK313352 TSC_hg19_v1_chr15_-_65503811 NM_003613	-190017	-	TSC_hg19_v1_chr15_-_65715258 AB529157	21416	-	TSC_hg19_v1_chr15_-_65715412 AB052622 NM_020962	21572	-	AY354202 BC040203 NM_197960 AK302638	115778	-	BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC006389|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##NM_017851|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##AK000516|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##BC035776|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AF035408|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AY358904|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225652|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225926|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK313352|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##NM_003613|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AB052622|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##NM_020962|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##AY354202|DPP8|54878|dipeptidyl-peptidase 8##BC040203|DPP8|54878|dipeptidyl-peptidase 8##NM_197960|DPP8|54878|dipeptidyl-peptidase 8##AK302638|DPP8|54878|dipeptidyl-peptidase 8	0.996213	CTCF.p2:8:0.996
chr15	38983040	38983179	reg1017968.p1	8.121	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-126178	-	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-236764	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	-438087	+	AK093014 AX747856 BC119016 BC119810 NM_207444	5689	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	559816	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	890220	+	EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1	0.977309	CTCF.p2:21:0.977
chr5	68855876	68856023	reg1017412.p1	8.121	+	NM_001205255 FJ786083 FJ786084 GQ225096 GQ225097 GQ225098 GQ402517 AB587564 DQ892423 DQ895637 AB451306 AB451437	-55912	+	U49184 TSC_hg19_v1_chr5_+_68788631 NM_001205254 AK313501 BC029886 AK290697	-67402	+	NM_002538 U53823	-67831	+	BC105980 TSC_hg19_v1_chr5_+_68856047 BX537982 AK315282 NM_001098728 BX647445	92	+	TSC_hg19_v1_chr5_+_68856071 AF078847 AK292361 BC065021 NM_001042490 BC064557 U21911 BC157894 BC171919 BC171860	157	+	NM_021967 NM_022968 BC021174 NM_001178087 NM_022978 AF073519 AF073518 BC035932 BC093880 BC171749 BC101970 BC103687 BC104738 BC143260 BC093882 BC143255	465216	+	NM_001205255|OCLN|100506658|occludin##FJ786083|OCLN|100506658|occludin##FJ786084|OCLN|100506658|occludin##GQ225096|OCLN|100506658|occludin##GQ225097|OCLN|100506658|occludin##GQ225098|OCLN|100506658|occludin##GQ402517|OCLN|100506658|occludin##DQ892423|OCLN|100506658|occludin##DQ895637|OCLN|100506658|occludin##AB451306|OCLN|100506658|occludin##AB451437|OCLN|100506658|occludin##U49184|OCLN|100506658|occludin##NM_001205254|OCLN|100506658|occludin##AK313501|OCLN|100506658|occludin##BC029886|OCLN|100506658|occludin##AK290697|OCLN|100506658|occludin##NM_002538|OCLN|100506658|occludin##U53823|OCLN|100506658|occludin##BC105980|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BX537982|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##AK315282|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##NM_001098728|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BX647445|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##AF078847|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AK292361|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC065021|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##NM_001042490|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##BC064557|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##U21911|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##BC157894|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC171919|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##BC171860|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	0.0	
chr18	13531003	13531097	reg1012032.p1	8.119	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-312265	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-539705	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-582986	+	NM_001003674 NM_001003675	80614	+	AF009426 AF009427 NM_004338 NM_181483	89816	+	TSC_hg19_v1_chr18_-_13726549 AK055618	195456	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.987629	CTCF.p2:-9:0.975
chrX	106268904	106269023	reg1018927.p1	8.119	+	TSC_hg19_v1_chrX_-_106243443 EF125210 NM_001085354 NM_024657	-25489	-	EF125209 TSC_hg19_v1_chrX_-_106243332	-25679	-	TSC_hg19_v1_chrX_+_106171329 AY358474 BC014424 AB463528 DQ892216 DQ895412 AF250558	-97570	+	TSC_hg19_v1_chrX_-_106362035 AK001878 BC006986	93069	-	TSC_hg19_v1_chrX_-_106362053 AK023732 NM_001171080 NM_018301	93097	-	AK000137 TSC_hg19_v1_chrX_-_106449664 BC016327 BC017799 NM_017681	180643	-	EF125210|MORC4|79710|MORC family CW-type zinc finger 4##NM_001085354|MORC4|79710|MORC family CW-type zinc finger 4##NM_024657|MORC4|79710|MORC family CW-type zinc finger 4##EF125209|MORC4|79710|MORC family CW-type zinc finger 4##AY358474|CLDN2|9075|claudin 2##BC014424|CLDN2|9075|claudin 2##DQ892216|CLDN2|9075|claudin 2##DQ895412|CLDN2|9075|claudin 2##AF250558|CLDN2|9075|claudin 2##AK001878|RBM41|55285|RNA binding motif protein 41##BC006986|RBM41|55285|RNA binding motif protein 41##AK023732|RBM41|55285|RNA binding motif protein 41##NM_001171080|RBM41|55285|RNA binding motif protein 41##NM_018301|RBM41|55285|RNA binding motif protein 41##AK000137|NUP62CL|54830|nucleoporin 62kDa C-terminal like##BC016327|NUP62CL|54830|nucleoporin 62kDa C-terminal like##BC017799|NUP62CL|54830|nucleoporin 62kDa C-terminal like##NM_017681|NUP62CL|54830|nucleoporin 62kDa C-terminal like	0.921797	CTCF.p2:1:0.922
chr20	10362251	10362384	reg1018078.p1	8.118	+	TSC_hg19_v1_chr20_-_10200139 AK124961	-162174	-	TSC_hg19_v1_chr20_+_10199575 NM_003081 NM_130811 AK094560 AK098347 D21267 AK223617 AK314359 AK289647 BC010647 BX647443 AK098767 L19760 L19761	-162790	+	NM_022096 NM_198798 AK097689 TSC_hg19_v1_chr20_+_10015744 BC022878 BC028189 BC011591	-346585	+	AF221993 NM_018848	50252	-	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	52522	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	53659	+	AK124961|LOC100131208|100131208|uncharacterized LOC100131208##NM_003081|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_130811|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK094560|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098347|SNAP25|6616|synaptosomal-associated protein, 25kDa##D21267|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK223617|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK314359|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK289647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BC010647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BX647443|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098767|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19760|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19761|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_022096|ANKRD5|63926|ankyrin repeat domain 5##NM_198798|ANKRD5|63926|ankyrin repeat domain 5##AK097689|ANKRD5|63926|ankyrin repeat domain 5##BC022878|ANKRD5|63926|ankyrin repeat domain 5##BC028189|ANKRD5|63926|ankyrin repeat domain 5##BC011591|ANKRD5|63926|ankyrin repeat domain 5##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94	0.431916	CTCF.p2:20:0.432
chr9	1727506	1727651	reg1015693.p2	8.118	+	AF130729 NM_181872	-676969	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-677208	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-677234	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	287718	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	894229	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	894496	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.125095	
chr11	2421557	2421688	reg1016233.p1	8.117	+	TSC_hg19_v1_chr11_+_2398543 NM_004356 BC093047 M33680	-23075	+	TSC_hg19_v1_chr11_+_2323366 AY039001 AK310116 CU677677 AK298692	-98236	+	TSC_hg19_v1_chr11_+_2323260 AK128812 AK307638 BC016693 NM_139022	-98371	+	TSC_hg19_v1_chr11_+_2421990 BC006091	374	+	AF125568 NM_005706	1900	+	AJ270996 BC093787 BC093789 BC143351 BC143353 AF177473 NM_014555	22635	-	NM_004356|CD81|975|CD81 molecule##BC093047|CD81|975|CD81 molecule##M33680|CD81|975|CD81 molecule##AY039001|TSPAN32|10077|tetraspanin 32##AK310116|TSPAN32|10077|tetraspanin 32##AK298692|TSPAN32|10077|tetraspanin 32##AK128812|TSPAN32|10077|tetraspanin 32##AK307638|TSPAN32|10077|tetraspanin 32##BC016693|TSPAN32|10077|tetraspanin 32##NM_139022|TSPAN32|10077|tetraspanin 32##BC006091|TSSC4|10078|tumor suppressing subtransferable candidate 4##AF125568|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_005706|TSSC4|10078|tumor suppressing subtransferable candidate 4##AJ270996|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093787|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093789|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143351|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143353|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF177473|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##NM_014555|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5	0.983621	CTCF.p2:20:0.984
chr11	75608015	75608157	reg1016540.p1	8.117	+	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	-81808	+	NM_003369 TSC_hg19_v1_chr11_+_75526233 AK291011	-81864	+	TSC_hg19_v1_chr11_+_75479822 AB048286 AY780646 AY358532 AL834287 AF384161 CU677247 AY780647	-128163	+	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	309426	-	TSC_hg19_v1_chr11_-_75921806 AK075540	313718	-	TSC_hg19_v1_chr11_-_76091995 AB590785 AF007393 AF081567 HQ258648 NM_004705 AK291843 BC117138 BC117140 BC110304	483922	-	BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##NM_003369|UVRAG|7405|UV radiation resistance associated gene##AK291011|UVRAG|7405|UV radiation resistance associated gene##AB048286|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY358532|DGAT2|84649|diacylglycerol O-acyltransferase 2##AL834287|DGAT2|84649|diacylglycerol O-acyltransferase 2##AF384161|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY780647|DGAT2|84649|diacylglycerol O-acyltransferase 2##BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11##AK075540|WNT11|7481|wingless-type MMTV integration site family, member 11##AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	0.984848	CTCF.p2:-17:0.985
chr16	11499572	11499681	reg1012818.p1	8.117	+	TSC_hg19_v1_chr16_+_11439315 BC013040	-60308	+	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	-60332	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-124484	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	180561	-	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	181163	-	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	262672	+	BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin	0.496922	CTCF.p2:-17:0.497
chr22	22777103	22777240	reg1019079.p1	8.117	+	TSC_hg19_v1_chr22_+_22764097 M97923 M97922 BC020233 BC022098 X80306 BC012876 BC073769 BC073770 X57811 AF490938 AJ131057 JF806287 U96044 L26900 L26908 L26901 HM996154 HM996200 HM996261 HM996384 HM996406 HM996445 AB064022 AY686890 HM996105 AB027448 AB063983 AB064005 AB114461 AB114463 AB114465 AB114467 AB114468 AB114470 AB114471 AB114472 AB363370 AB363380 AB363386 AB363387 AB363389 AB363390 AB363392 AB363393 AB363394 AF058065 AF058066 AF058067 AF060124 AF060127 AF063768 AF064495 AF064499 AF320834 AF320844 AF362765 AF394198 AJ238330 AJ276100 AJ298041 AJ399845 AJ399849 AJ399852 AJ399856 AJ399867 AJ399868 AJ399869 AM040515 AM040578 AM181362 AM181366 AY028996 AY942050 AY942088 AY942095 AY942098 AY942100 AY942127 DQ098691 DQ098693 DQ098745 DQ098749 DQ098786 DQ187499 DQ187503 DQ187571 DQ187623 DQ187624 DQ187625 DQ187626 DQ187694 DQ187719 DQ187722 DQ187723 DQ322742 DQ322810 DQ322821 DQ322822 DQ322823 DQ322874 DQ323004 DQ490721 DQ490722 DQ490723 DQ840923 DQ840924 DQ840925 DQ840930 DQ840933 DQ840937 DQ841069 DQ841085 DQ841092 DQ841094 DQ841095 DQ841098 DQ841102 DQ841104 DQ841105 DQ841106 DQ841107 DQ841108 DQ841109 DQ841110 DQ841111 DQ841112 DQ841114 DQ841115 DQ841116 DQ841117 EF589403 EF589431 EF589450 EF589512 EF589542 EF589558 EF710775 EF710776 EF710777 EF710778 EF710779 EF710780 EF710781 EF710782 EF711006 EF711007 EF711008 EF711009 EU599322 FJ385471 S73120 X91132 Z18835 DQ098692 X91133 DQ098695 HM996447 U09885 AF044481 AF044482 AF044483 AJ580928 X83712 X83713 AB114466 AY942023 AY062351 AY998675 DQ098694 DQ098812 DQ098765 AJ241371 X92997 X93002 X93004 AJ298616 U70235 AY062352 AY998672 AF103597 AF103703 AF103635 FJ385549 AF032355 AF103626 AF103705 AF103676 AF043584 AF103615 AF103648 AF103650 AF103714 AF043585 AF043587 AF043588 AF052823 AF043583 AY180392 AF043592 S42404 AF043589 AF043591	-12927	+	TSC_hg19_v1_chr22_+_22758538 GU179344	-18607	+	TSC_hg19_v1_chr22_+_22735207 BC073784 BC073795 X57815 AY204758 S63730 X57819 X57817	-41941	+	TSC_hg19_v1_chr22_+_22786291 L22588	9118	+	TSC_hg19_v1_chr22_-_22863061 BC040020	85910	-	AK097608 NM_080764	86333	-	X57817|IGLJ3|28831|immunoglobulin lambda joining 3##BC040020|ZNF280B|140883|zinc finger protein 280B##AK097608|ZNF280B|140883|zinc finger protein 280B##NM_080764|ZNF280B|140883|zinc finger protein 280B	0.998768	CTCF.p2:-20:0.999
chr9	15277935	15278041	reg1015147.p1	8.117	+	AK301427 NM_001168342	-27833	-	BX537574 NM_144966	-366996	-	AB160987 TSC_hg19_v1_chr9_-_14869016	-408989	-	TSC_hg19_v1_chr9_-_15307215 BC070139 AK301185 AK298581 AK091187 AX746836	29212	-	TSC_hg19_v1_chr9_-_15307325 AK298998 BC142985 AK310482 NM_001168339 NM_001168340 NM_001168341 NM_152574	29356	-	TSC_hg19_v1_chr9_+_15422741 BC036031 NM_001039697	144720	+	AK301427|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168342|TTC39B|158219|tetratricopeptide repeat domain 39B##BX537574|FREM1|158326|FRAS1 related extracellular matrix 1##NM_144966|FREM1|158326|FRAS1 related extracellular matrix 1##AB160987|FREM1|158326|FRAS1 related extracellular matrix 1##BC070139|TTC39B|158219|tetratricopeptide repeat domain 39B##AK301185|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298581|TTC39B|158219|tetratricopeptide repeat domain 39B##AK091187|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298998|TTC39B|158219|tetratricopeptide repeat domain 39B##BC142985|TTC39B|158219|tetratricopeptide repeat domain 39B##AK310482|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168339|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168340|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168341|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_152574|TTC39B|158219|tetratricopeptide repeat domain 39B##BC036031|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##NM_001039697|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	0.925756	CTCF.p2:0:0.926
chr3	75478901	75479014	reg1017169.p2	8.116	+	AB384611 BC150608 NM_020872	-908655	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1804919	-	BC051316 BC064501 NM_018029	-2368148	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	5192	-	AK000525 NM_001124759	234526	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	242529	+	BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074	0.989711	CTCF.p2:6:0.990
chr5	168374399	168374525	reg1016377.p2	8.116	+	TSC_hg19_v1_chr5_-_168271862 BC023515	-102603	-	TSC_hg19_v1_chr5_-_168006609 BC013705 NM_024594	-367947	-	TSC_hg19_v1_chr5_-_168006352 AK223285 AK022961	-368111	-	AB383998 AK310549 TSC_hg19_v1_chr5_-_168728144 BC142665 BC142717 AY358884 AB017169 BC098388 AB011538 BC146759 NM_003062	353496	-	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	636259	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	689782	+	BC013705|PANK3|79646|pantothenate kinase 3##NM_024594|PANK3|79646|pantothenate kinase 3##AK223285|PANK3|79646|pantothenate kinase 3##AK022961|PANK3|79646|pantothenate kinase 3##AK310549|SLIT3|6586|slit homolog 3 (Drosophila)##BC142665|SLIT3|6586|slit homolog 3 (Drosophila)##BC142717|SLIT3|6586|slit homolog 3 (Drosophila)##AY358884|SLIT3|6586|slit homolog 3 (Drosophila)##AB017169|SLIT3|6586|slit homolog 3 (Drosophila)##BC098388|SLIT3|6586|slit homolog 3 (Drosophila)##AB011538|SLIT3|6586|slit homolog 3 (Drosophila)##BC146759|SLIT3|6586|slit homolog 3 (Drosophila)##NM_003062|SLIT3|6586|slit homolog 3 (Drosophila)##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##NM_004946|DOCK2|1794|dedicator of cytokinesis 2	0.997642	CTCF.p2:-5:0.998
chr7	102706239	102706375	reg1016157.p2	8.116	+	NM_001031692 NM_005824 TSC_hg19_v1_chr7_+_102553446 AK226021 AK225701 U32907 AK290305 BC027903 AY358889	-152875	+	TSC_hg19_v1_chr7_+_102389473 NM_001145268 NM_001145269 BC029175 AK297455 AK298753 AK054745 DQ893359 DQ896678	-316817	+	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	-394187	-	AK097537 NM_145032	8707	-	AY359238 AY359239 AK095387 BC031285 BC026121 NM_001111038	8922	-	TSC_hg19_v1_chr7_+_102715335 AY150851 AY150852 AY150853 AY150854 NM_001161009 NM_001161010 NM_001161011 NM_001161012 NM_001161013 NM_031905	9009	+	NM_001031692|LRRC17|10234|leucine rich repeat containing 17##NM_005824|LRRC17|10234|leucine rich repeat containing 17##AK226021|LRRC17|10234|leucine rich repeat containing 17##AK225701|LRRC17|10234|leucine rich repeat containing 17##U32907|LRRC17|10234|leucine rich repeat containing 17##AK290305|LRRC17|10234|leucine rich repeat containing 17##BC027903|LRRC17|10234|leucine rich repeat containing 17##AY358889|LRRC17|10234|leucine rich repeat containing 17##NM_001145268|FAM185A|222234|family with sequence similarity 185, member A##NM_001145269|FAM185A|222234|family with sequence similarity 185, member A##BC029175|FAM185A|222234|family with sequence similarity 185, member A##AK297455|FAM185A|222234|family with sequence similarity 185, member A##AK298753|FAM185A|222234|family with sequence similarity 185, member A##AK054745|FAM185A|222234|family with sequence similarity 185, member A##DQ893359|FAM185A|222234|family with sequence similarity 185, member A##DQ896678|FAM185A|222234|family with sequence similarity 185, member A##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK097537|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_145032|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY359238|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY359239|FBXL13|222235|F-box and leucine-rich repeat protein 13##AK095387|FBXL13|222235|F-box and leucine-rich repeat protein 13##BC031285|FBXL13|222235|F-box and leucine-rich repeat protein 13##BC026121|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_001111038|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY150851|ARMC10|83787|armadillo repeat containing 10##AY150852|ARMC10|83787|armadillo repeat containing 10##AY150853|ARMC10|83787|armadillo repeat containing 10##AY150854|ARMC10|83787|armadillo repeat containing 10##NM_001161009|ARMC10|83787|armadillo repeat containing 10##NM_001161010|ARMC10|83787|armadillo repeat containing 10##NM_001161011|ARMC10|83787|armadillo repeat containing 10##NM_001161012|ARMC10|83787|armadillo repeat containing 10##NM_001161013|ARMC10|83787|armadillo repeat containing 10##NM_031905|ARMC10|83787|armadillo repeat containing 10	0.242749	CTCF.p2:2:0.243
chr9	32148682	32148804	reg1015979.p1	8.116	+	AK056372 NM_152570	-3429441	-	AK057806 JN681271 NM_145005	-4574902	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-4575272	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	235847	+	TSC_hg19_v1_chr9_+_32384622 AK057904	235884	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	235906	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.830069	CTCF.p2:-19:0.830
chr11	22809234	22809365	reg1016253.p1	8.115	+	TSC_hg19_v1_chr11_+_22696382 CU680566 AB590780 CR450285	-112901	+	NM_005256 TSC_hg19_v1_chr11_+_22696327 U95032	-112963	+	BC013326 BC040470 NM_177553	-119646	+	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	42046	-	NM_001195637	72672	-	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	1709350	+	CR450285|GAS2|2620|growth arrest-specific 2##NM_005256|GAS2|2620|growth arrest-specific 2##U95032|GAS2|2620|growth arrest-specific 2##BC013326|GAS2|2620|growth arrest-specific 2##BC040470|GAS2|2620|growth arrest-specific 2##NM_177553|GAS2|2620|growth arrest-specific 2##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2	0.880176	CTCF.p2:14:0.880
chr19	141188	141302	reg1018802.p1	8.115	+	AY972818 AY972819 BC136848 BC136867 BC136907 BC136908 NM_001005240	-30594	+	TSC_hg19_v1_chr19_-_70955 AK308635	-70286	-	None	None	None	NM_177543	149923	-	BT007021 CU678210 AF035959 AF047760 AF056083 BC002806 TSC_hg19_v1_chr19_-_291402 NM_003712 NM_177526	150139	-	TSC_hg19_v1_chr19_-_344795 BC028203 NM_017550	203542	-	AY972818|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AY972819|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136848|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136867|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136907|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136908|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##NM_001005240|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AK308635|WASH5P|375690|WAS protein family homolog 5 pseudogene##NM_177543|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BT007021|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF035959|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF047760|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF056083|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BC002806|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_003712|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_177526|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BC028203|MIER2|54531|mesoderm induction early response 1, family member 2##NM_017550|MIER2|54531|mesoderm induction early response 1, family member 2	0.283133	CTCF.p2:16:0.283
chr3	140218098	140218222	reg1014572.p1	8.115	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-563908	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-564142	+	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	-821332	-	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	178799	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	442607	+	TSC_hg19_v1_chr3_+_140770412 BC051354	552318	+	AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.131359	
chr4	9002347	9002449	reg1014621.p2	8.115	+	NM_001040071	-50922	+	AB593128 M99587 NM_018942	-128901	-	U83411 TSC_hg19_v1_chr4_+_8594521	-407875	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	214731	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	243205	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	257450	+	NM_001040071|LOC650293|650293|seven transmembrane helix receptor##M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.999894	CTCF.p2:-3:1.000
chr7	28136372	28136500	reg1018977.p1	8.115	+	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-356617	+	BC001764 TSC_hg19_v1_chr7_+_27779809	-356627	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	-356661	+	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	83765	-	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	83970	-	L05913 NM_182899	202503	+	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5	0.99857	CTCF.p2:10:0.999
chr3	48274279	48274420	reg1019916.p1	8.114	+	NM_004345 BC055089 X89658 U19970 CU691114 AB590666 AY251531 Z38026 AY162210 CR457083 CR541961	-9431	+	BC007401 BC018642 NM_001789 NM_201567 TSC_hg19_v1_chr3_-_48229900 M81933	-44490	-	AF277722 AY137580 EU812118 CU675643 AB590275 DQ890753 DQ892919 DQ896168 AK290554 TSC_hg19_v1_chr3_-_48229511	-44921	-	TSC_hg19_v1_chr3_+_48282593 BC028160 BC062690 AK298782 AY258146 NM_016089 AL832831 BC006247 BC048798 BC005859 AF114816 AF114817 AB463372	8261	+	DQ892283 DQ895483 AK308970 AF051941 TSC_hg19_v1_chr3_-_48342858 U90449 BC001808 BC012828 NM_005793 AK222555 AK294809 AK307332 AK297364 AK309090	68502	-	NM_001080525	95481	-	NM_004345|CAMP|820|cathelicidin antimicrobial peptide##BC055089|CAMP|820|cathelicidin antimicrobial peptide##X89658|CAMP|820|cathelicidin antimicrobial peptide##U19970|CAMP|820|cathelicidin antimicrobial peptide##AY251531|CAMP|820|cathelicidin antimicrobial peptide##Z38026|CAMP|820|cathelicidin antimicrobial peptide##AY162210|CAMP|820|cathelicidin antimicrobial peptide##CR457083|CAMP|820|cathelicidin antimicrobial peptide##CR541961|CAMP|820|cathelicidin antimicrobial peptide##BC007401|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##BC018642|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_001789|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_201567|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##M81933|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##BC028160|ZNF589|51385|zinc finger protein 589##BC062690|ZNF589|51385|zinc finger protein 589##AK298782|ZNF589|51385|zinc finger protein 589##AY258146|ZNF589|51385|zinc finger protein 589##NM_016089|ZNF589|51385|zinc finger protein 589##AL832831|ZNF589|51385|zinc finger protein 589##BC006247|ZNF589|51385|zinc finger protein 589##BC048798|ZNF589|51385|zinc finger protein 589##BC005859|ZNF589|51385|zinc finger protein 589##AF114816|ZNF589|51385|zinc finger protein 589##AF114817|ZNF589|51385|zinc finger protein 589##DQ892283|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##DQ895483|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK308970|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AF051941|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##U90449|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC001808|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC012828|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##NM_005793|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK222555|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK294809|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK297364|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)	0.444757	CTCF.p2:-13:0.445
chr6	71416373	71416477	reg1015445.p1	8.114	+	TSC_hg19_v1_chr6_+_71377620 AK315579 BC028074 BC008672 AK303387 BC036123 AK023221 AY055003 AY055004 AK222711 AK290448 CU688386	-38770	+	TSC_hg19_v1_chr6_+_71377511 NM_001044305 NM_021940 AF442495	-38902	+	TSC_hg19_v1_chr6_+_71276632 BC018085 NM_145267 BC104649 GQ129294 GQ129295	-139800	+	AB075843 NM_080742	250338	-	NM_024576 TSC_hg19_v1_chr6_+_71998479	582061	+	TSC_hg19_v1_chr6_+_71998513 BC018688	582085	+	AK315579|SMAP1|60682|small ArfGAP 1##BC028074|SMAP1|60682|small ArfGAP 1##BC008672|SMAP1|60682|small ArfGAP 1##AK303387|SMAP1|60682|small ArfGAP 1##BC036123|SMAP1|60682|small ArfGAP 1##AK023221|SMAP1|60682|small ArfGAP 1##AY055003|SMAP1|60682|small ArfGAP 1##AY055004|SMAP1|60682|small ArfGAP 1##AK222711|SMAP1|60682|small ArfGAP 1##AK290448|SMAP1|60682|small ArfGAP 1##NM_001044305|SMAP1|60682|small ArfGAP 1##NM_021940|SMAP1|60682|small ArfGAP 1##AF442495|SMAP1|60682|small ArfGAP 1##BC018085|C6orf57|135154|chromosome 6 open reading frame 57##NM_145267|C6orf57|135154|chromosome 6 open reading frame 57##BC104649|C6orf57|135154|chromosome 6 open reading frame 57##GQ129294|C6orf57|135154|chromosome 6 open reading frame 57##GQ129295|C6orf57|135154|chromosome 6 open reading frame 57##AB075843|B3GAT2|135152|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)##NM_080742|B3GAT2|135152|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)##NM_024576|OGFRL1|79627|opioid growth factor receptor-like 1##BC018688|OGFRL1|79627|opioid growth factor receptor-like 1	0.998555	CTCF.p2:-7:0.999
chr9	110184623	110184753	reg1018644.p1	8.114	+	NM_001244713 AK297986 AK316189	-137597	+	AY313777 NM_001244724 TSC_hg19_v1_chr9_+_110046392	-138322	+	TSC_hg19_v1_chr9_+_110045874 DQ890563 DQ893726 AB527553 CU676798	-138779	+	TSC_hg19_v1_chr9_-_110250732 AK095134	66032	-	HM026463 CU688792 CU689020 DQ891793 DQ894975 AB385001 TSC_hg19_v1_chr9_-_110251402 BC030811 BC029923 AK313489	66760	-	AF105036 AF022184 TSC_hg19_v1_chr9_-_110251847 U70663	67152	-	NM_001244713|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK297986|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK316189|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AY313777|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##NM_001244724|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##DQ890563|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##DQ893726|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK095134|KLF4|9314|Kruppel-like factor 4 (gut)##HM026463|KLF4|9314|Kruppel-like factor 4 (gut)##DQ891793|KLF4|9314|Kruppel-like factor 4 (gut)##DQ894975|KLF4|9314|Kruppel-like factor 4 (gut)##BC030811|KLF4|9314|Kruppel-like factor 4 (gut)##BC029923|KLF4|9314|Kruppel-like factor 4 (gut)##AK313489|KLF4|9314|Kruppel-like factor 4 (gut)##AF105036|KLF4|9314|Kruppel-like factor 4 (gut)##AF022184|KLF4|9314|Kruppel-like factor 4 (gut)##U70663|KLF4|9314|Kruppel-like factor 4 (gut)	0.868918	CTCF.p2:-17:0.869
chr1	92349081	92349184	reg1014007.p2	8.112	+	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	-382451	+	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	-382713	+	TSC_hg19_v1_chr1_-_91870367 AB058637 AK294754 AK302582 AB058636 AB204867 NM_001017975	-478760	-	AK291345 BC126116 BC136295 BC143869 TSC_hg19_v1_chr1_-_92351559	2385	-	AK225799 TSC_hg19_v1_chr1_-_92351709 NM_001195683 NM_003243	2615	-	L07594 NM_001195684	22426	-	NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB058637|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK294754|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK302582|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB058636|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB204867|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001017975|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK291345|TGFBR3|7049|transforming growth factor, beta receptor III##BC126116|TGFBR3|7049|transforming growth factor, beta receptor III##BC136295|TGFBR3|7049|transforming growth factor, beta receptor III##BC143869|TGFBR3|7049|transforming growth factor, beta receptor III##AK225799|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195683|TGFBR3|7049|transforming growth factor, beta receptor III##NM_003243|TGFBR3|7049|transforming growth factor, beta receptor III##L07594|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195684|TGFBR3|7049|transforming growth factor, beta receptor III	0.0	
chr2	230931816	230931959	reg1015541.p1	8.112	+	TSC_hg19_v1_chr2_+_230787218 BC017869 BC022538 NM_174899 BC033935 AK289655 AK309702	-144670	+	TSC_hg19_v1_chr2_-_230786712 AK310971	-145138	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	-145226	-	BC065524 BC034382 AK055356 TSC_hg19_v1_chr2_-_230933641 NM_152527	1779	-	AL832300 BC012447 AK026488 AF280094 AF280095 BC019059 NM_004509 NM_004510 NM_080424 TSC_hg19_v1_chr2_-_231084830	152828	-	AK301097 NM_001185015	158556	-	BC017869|FBXO36|130888|F-box protein 36##BC022538|FBXO36|130888|F-box protein 36##NM_174899|FBXO36|130888|F-box protein 36##BC033935|FBXO36|130888|F-box protein 36##AK289655|FBXO36|130888|F-box protein 36##AK309702|FBXO36|130888|F-box protein 36##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12##BC065524|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##BC034382|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##AK055356|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##NM_152527|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##AL832300|SP110|3431|SP110 nuclear body protein##BC012447|SP110|3431|SP110 nuclear body protein##AK026488|SP110|3431|SP110 nuclear body protein##AF280094|SP110|3431|SP110 nuclear body protein##AF280095|SP110|3431|SP110 nuclear body protein##BC019059|SP110|3431|SP110 nuclear body protein##NM_004509|SP110|3431|SP110 nuclear body protein##NM_004510|SP110|3431|SP110 nuclear body protein##NM_080424|SP110|3431|SP110 nuclear body protein##AK301097|SP110|3431|SP110 nuclear body protein##NM_001185015|SP110|3431|SP110 nuclear body protein	0.11294	
chr2	5506149	5506257	reg1016894.p1	8.112	+	AK302299 NM_018436 BC029652	-1800406	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-1863634	+	X74803 TSC_hg19_v1_chr2_+_3627765	-1878458	+	U23752 AB028641 NM_003108 BC025789 AB464713	326612	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	1499697	-	TSC_hg19_v1_chr2_-_7006650 AK308509	1500500	-	AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##X74803|RPS7|6201|ribosomal protein S7##U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	0.998562	CTCF.p2:-1:0.999
chr6	15464641	15464760	reg1016713.p2	8.112	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-215587	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-215799	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-218288	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	198477	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	198590	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	664602	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.910669	CTCF.p2:4:0.911
chr11	34912483	34912636	reg1016771.p1	8.111	+	AK310867 NM_001206616	-258549	+	TSC_hg19_v1_chr11_+_34642661 AF212848 AF203977 AF170583 AF124438 AF124439	-269893	+	NM_001206615 NM_012153 TSC_hg19_v1_chr11_+_34642639	-269946	+	NM_001135024 NM_001166158 NM_003477	25117	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	25330	-	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	25598	+	AK310867|EHF|26298|ets homologous factor##NM_001206616|EHF|26298|ets homologous factor##AF212848|EHF|26298|ets homologous factor##AF203977|EHF|26298|ets homologous factor##AF170583|EHF|26298|ets homologous factor##AF124438|EHF|26298|ets homologous factor##AF124439|EHF|26298|ets homologous factor##NM_001206615|EHF|26298|ets homologous factor##NM_012153|EHF|26298|ets homologous factor##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X	0.466377	CTCF.p2:24:0.466
chr4	153422112	153422239	reg1014059.p1	8.111	+	NM_001013415 AY008274	-118511	-	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	-148279	-	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	-740034	-	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	34119	-	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	35258	+	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	179025	-	NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154	0.994583	CTCF.p2:-15:0.995
chr15	42430066	42430157	reg1014294.p1	8.110	+	AB527201 AB090876 NM_178034	-43407	-	NM_001206670	-87211	-	AK074621 AK292634 TSC_hg19_v1_chr15_-_42264753 AK024902 NM_139265	-165358	-	BC111481 BC035335 AK122623 BC142682 BC146648 BC131531 AK304368 AK172836 NM_213600	18692	-	TSC_hg19_v1_chr15_-_42500479 AF280814 CU686671 AM392538 AM393769 AB018313	70296	-	TSC_hg19_v1_chr15_-_42500503 BC068559 AF281052 BX537404 NM_015289	70408	-	AB090876|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##NM_178034|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##NM_001206670|PLA2G4E|123745|phospholipase A2, group IVE##AK074621|EHD4|30844|EH-domain containing 4##AK292634|EHD4|30844|EH-domain containing 4##AK024902|EHD4|30844|EH-domain containing 4##NM_139265|EHD4|30844|EH-domain containing 4##BC111481|PLA2G4F|255189|phospholipase A2, group IVF##BC035335|PLA2G4F|255189|phospholipase A2, group IVF##AK122623|PLA2G4F|255189|phospholipase A2, group IVF##BC142682|PLA2G4F|255189|phospholipase A2, group IVF##BC146648|PLA2G4F|255189|phospholipase A2, group IVF##BC131531|PLA2G4F|255189|phospholipase A2, group IVF##AK304368|PLA2G4F|255189|phospholipase A2, group IVF##AK172836|PLA2G4F|255189|phospholipase A2, group IVF##NM_213600|PLA2G4F|255189|phospholipase A2, group IVF##AF280814|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AM392538|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AM393769|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AB018313|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##BC068559|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##AF281052|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##BX537404|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)##NM_015289|VPS39|23339|vacuolar protein sorting 39 homolog (S. cerevisiae)	0.400159	CTCF.p2:-15:0.400
chr5	1011358	1011461	reg1015883.p2	8.110	+	TSC_hg19_v1_chr5_+_1008916 BC012176 AF358137 AB062887 NM_033120	-2376	+	TSC_hg19_v1_chr5_-_997422 AK126199 NM_001242737	-13974	-	TSC_hg19_v1_chr5_+_892974 NM_001166260 NM_004237 AK310376 BC000404 BC019294 U96131 AB527502 EU446745 CU674196 CR456744 L40384	-118377	+	CU675797 AF105365 TSC_hg19_v1_chr5_-_1112151 AK302856 BC098390 BC007760 BC018982 NM_006598	100748	-	AK096054 AK290811 NM_001003841 BC146290 BC148801 AB527217 AY591756 AY596807	190328	+	AK055798 NM_182632 AK298257 BC056757	214081	+	BC012176|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF358137|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AB062887|NKD2|85409|naked cuticle homolog 2 (Drosophila)##NM_033120|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AK126199|LOC100506688|100506688|uncharacterized LOC100506688##NM_001242737|LOC100506688|100506688|uncharacterized LOC100506688##NM_001166260|TRIP13|9319|thyroid hormone receptor interactor 13##NM_004237|TRIP13|9319|thyroid hormone receptor interactor 13##AK310376|TRIP13|9319|thyroid hormone receptor interactor 13##BC000404|TRIP13|9319|thyroid hormone receptor interactor 13##BC019294|TRIP13|9319|thyroid hormone receptor interactor 13##U96131|TRIP13|9319|thyroid hormone receptor interactor 13##EU446745|TRIP13|9319|thyroid hormone receptor interactor 13##CR456744|TRIP13|9319|thyroid hormone receptor interactor 13##L40384|TRIP13|9319|thyroid hormone receptor interactor 13##AF105365|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK302856|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC098390|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC007760|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC018982|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##NM_006598|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK096054|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK290811|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##NM_001003841|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC146290|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC148801|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY591756|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY596807|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK055798|SLC6A18|348932|solute carrier family 6, member 18##NM_182632|SLC6A18|348932|solute carrier family 6, member 18##AK298257|SLC6A18|348932|solute carrier family 6, member 18##BC056757|SLC6A18|348932|solute carrier family 6, member 18	0.59017	CTCF.p2:16:0.590
chr11	44680121	44680239	reg1016553.p1	8.109	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-92953	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-93015	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-348504	-	NM_130783	105795	+	TSC_hg19_v1_chr11_-_44956087 AF010315	275927	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	292237	-	AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_130783|TSPAN18|90139|tetraspanin 18##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11	0.616812	CTCF.p2:2:0.286	CTCF.p2:-63:0.331
chr12	19725888	19726034	reg1018250.p1	8.109	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-132773	+	TSC_hg19_v1_chr12_+_19592783 AB209384	-133166	+	TSC_hg19_v1_chr12_+_19592425 AK131361 NM_001114176 NM_153207 AK126973 BC022220	-133442	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	796237	+	AK308317 NM_001244683	998836	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	1122534	+	BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##AK131361|AEBP2|121536|AE binding protein 2##NM_001114176|AEBP2|121536|AE binding protein 2##NM_153207|AEBP2|121536|AE binding protein 2##AK126973|AEBP2|121536|AE binding protein 2##BC022220|AEBP2|121536|AE binding protein 2##BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	0.940451	CTCF.p2:3:0.940
chr3	81631304	81631403	reg1016762.p1	8.109	+	NM_002941	-1814295	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-2562766	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-2964368	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	179344	-	TSC_hg19_v1_chr3_-_81810798 AK312245	179445	-	TSC_hg19_v1_chr3_-_81810802 AK297939	179452	-	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.972876	CTCF.p2:1:0.973
chr7	18103989	18104135	reg1020470.p1	8.109	+	BC062797 BC005309 M57423 NM_175886	-36597	-	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	-123935	-	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	-124013	-	TSC_hg19_v1_chr7_+_18126583 AK304298 NM_001204144	22529	+	AK097178 TSC_hg19_v1_chr7_+_18330071	225997	+	TSC_hg19_v1_chr7_+_18535361 BC092441 BC150328 AB018287 AJ459808 BC152405 NM_001204145 NM_001204146 NM_014707 NM_178423 AK297404 AK316109 AY429540	431337	+	BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13##AK304298|HDAC9|9734|histone deacetylase 9##NM_001204144|HDAC9|9734|histone deacetylase 9##AK097178|HDAC9|9734|histone deacetylase 9##BC150328|HDAC9|9734|histone deacetylase 9##AB018287|HDAC9|9734|histone deacetylase 9##AJ459808|HDAC9|9734|histone deacetylase 9##BC152405|HDAC9|9734|histone deacetylase 9##NM_001204145|HDAC9|9734|histone deacetylase 9##NM_001204146|HDAC9|9734|histone deacetylase 9##NM_014707|HDAC9|9734|histone deacetylase 9##NM_178423|HDAC9|9734|histone deacetylase 9##AK297404|HDAC9|9734|histone deacetylase 9##AK316109|HDAC9|9734|histone deacetylase 9##AY429540|HDAC9|9734|histone deacetylase 9	0.187881	
chr7	83576698	83576827	reg1016440.p1	8.109	+	NM_012431	-298284	-	AK303925 NM_001178129	-306016	-	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	-784526	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	247560	-	NM_152754	1174484	-	AK309116 TSC_hg19_v1_chr7_-_84816296	1239473	-	NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	0.989412	CTCF.p2:3:0.989
chrUn_gl000228	52907	53023	reg1016738.p2	8.109	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.996146	CTCF.p2:-31:0.996
chr12	12890161	12890260	reg1010583.p2	8.108	+	TSC_hg19_v1_chr12_+_12878853 NM_001130415 AK127712 BC042478 AM393383	-11354	+	TSC_hg19_v1_chr12_+_12870308 AK312461 NM_004064 BC001971 AK298335	-20084	+	AK096388 NM_006143	-41090	-	BC126433 BC126435 NM_030817 TSC_hg19_v1_chr12_+_12938594 AK057867 AK225176 AK314392 AL136783	48367	+	AK310501 TSC_hg19_v1_chr12_+_12966285 AK302536 AL136666 NM_016355 NM_201224 AL833469 AK054574 BC068009 AB462951 AJ276704 AM393320 AM393714 AK225144 AF190165 BC009379 AK222940 AF078843 EF036507	76080	+	NM_003979	153745	+	NM_001130415|APOLD1|81575|apolipoprotein L domain containing 1##BC042478|APOLD1|81575|apolipoprotein L domain containing 1##AM393383|APOLD1|81575|apolipoprotein L domain containing 1##AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK096388|GPR19|2842|G protein-coupled receptor 19##NM_006143|GPR19|2842|G protein-coupled receptor 19##BC126433|APOLD1|81575|apolipoprotein L domain containing 1##BC126435|APOLD1|81575|apolipoprotein L domain containing 1##NM_030817|APOLD1|81575|apolipoprotein L domain containing 1##AK225176|APOLD1|81575|apolipoprotein L domain containing 1##AK314392|APOLD1|81575|apolipoprotein L domain containing 1##AL136783|APOLD1|81575|apolipoprotein L domain containing 1##AK310501|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK302536|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AL136666|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_016355|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_201224|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AL833469|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK054574|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC068009|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AJ276704|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AM393320|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AM393714|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK225144|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AF190165|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC009379|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK222940|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AF078843|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##EF036507|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_003979|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A	0.528618	CTCF.p2:-13:0.529
chr19	10025432	10025584	reg1016566.p1	8.108	+	BC031971 TSC_hg19_v1_chr19_+_9946188	-79344	+	NM_006221 TSC_hg19_v1_chr19_+_9946010 AK097558 AK291074 BC002899 U49070 AF086512 AB385559 BT019331 CR407654 CU678280 DQ892978 DQ896226	-79557	+	TSC_hg19_v1_chr19_+_9938597 AK309258 AF313915 BC007053 BC110839	-86895	+	TSC_hg19_v1_chr19_-_10047187 CU679906 DQ891083 DQ894265 AF131839 BC011361 NM_058164	21616	-	TSC_hg19_v1_chr19_-_10121181 AF177941 NM_015719	95635	-	DQ426888 AF229845 NM_015725	98384	+	BC031971|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##NM_006221|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK097558|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK291074|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##BC002899|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##U49070|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AF086512|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##BT019331|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##CR407654|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##DQ892978|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##DQ896226|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK309258|UBL5|59286|ubiquitin-like 5##AF313915|UBL5|59286|ubiquitin-like 5##BC007053|UBL5|59286|ubiquitin-like 5##BC110839|UBL5|59286|ubiquitin-like 5##DQ891083|OLFM2|93145|olfactomedin 2##DQ894265|OLFM2|93145|olfactomedin 2##AF131839|OLFM2|93145|olfactomedin 2##BC011361|OLFM2|93145|olfactomedin 2##NM_058164|OLFM2|93145|olfactomedin 2##AF177941|COL5A3|50509|collagen, type V, alpha 3##NM_015719|COL5A3|50509|collagen, type V, alpha 3##AF229845|RDH8|50700|retinol dehydrogenase 8 (all-trans)##NM_015725|RDH8|50700|retinol dehydrogenase 8 (all-trans)	0.804831	CTCF.p2:-7:0.288	CTCF.p2:58:0.517
chr2	46238136	46238252	reg1017819.p1	8.108	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-359120	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-399787	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-443066	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	286397	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	286781	+	NM_001145051	468509	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.993835	CTCF.p2:-17:0.994
chr3	125416973	125417133	reg1016384.p2	8.106	+	TSC_hg19_v1_chr3_-_125314371 NM_022776	-102680	-	TSC_hg19_v1_chr3_-_125239050 NM_003794	-178000	-	AF065485 TSC_hg19_v1_chr3_-_125239047 CU676320 DQ892131 DQ895325 AB528425 AK001835 AK298972 BC018762 BC021002	-178022	-	TSC_hg19_v1_chr3_+_125635451 BC032772 BC041080	218403	+	BC073816 NM_001015050 NM_001195223	238830	-	AF231410 NM_001012337 BC141849 AK302014	271001	+	NM_022776|OSBPL11|114885|oxysterol binding protein-like 11##NM_003794|SNX4|8723|sorting nexin 4##AF065485|SNX4|8723|sorting nexin 4##DQ892131|SNX4|8723|sorting nexin 4##DQ895325|SNX4|8723|sorting nexin 4##AK001835|SNX4|8723|sorting nexin 4##AK298972|SNX4|8723|sorting nexin 4##BC018762|SNX4|8723|sorting nexin 4##BC032772|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC041080|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like##AF231410|ROPN1B|152015|rhophilin associated tail protein 1B##NM_001012337|ROPN1B|152015|rhophilin associated tail protein 1B##BC141849|ROPN1B|152015|rhophilin associated tail protein 1B	1.115574	CTCF.p2:29:0.375	CTCF.p2:-73:0.740
chr3	9974588	9974702	reg1014652.p2	8.106	+	NM_001203263 NM_001203264 NM_001203265 NM_032732 NM_153460 AK092907 AK290670 AK294616 AK295377 AK315024 AX747801 AY359098 NM_153461 AK075534 AK096824 AK308241 AF458065 BC006411 AK225650 AY358840 AK315053 AK303171 EF676032	-15844	+	AF458069 AY358451 NM_001193380 NM_153480 BC063110 TSC_hg19_v1_chr3_+_9944533 AK074238 AK096801 AK298025 AK096793 AK314476 AK297697	-30101	+	NM_153483 BC035478 BC137077 BC137078	-30322	+	TSC_hg19_v1_chr3_+_9975538 AL050275 NM_015513 NM_001031717 NM_001077415 BC008720 AY358363 AK314113	901	+	BC089447 AK296317 TSC_hg19_v1_chr3_-_9994093 AY358158 AK090993 AX746722 BC040508 NM_207351	19433	-	CU692722 TSC_hg19_v1_chr3_-_10028505 BC022807	53780	-	NM_001203263|IL17RC|84818|interleukin 17 receptor C##NM_001203264|IL17RC|84818|interleukin 17 receptor C##NM_001203265|IL17RC|84818|interleukin 17 receptor C##NM_032732|IL17RC|84818|interleukin 17 receptor C##NM_153460|IL17RC|84818|interleukin 17 receptor C##AK092907|IL17RC|84818|interleukin 17 receptor C##AK290670|IL17RC|84818|interleukin 17 receptor C##AK294616|IL17RC|84818|interleukin 17 receptor C##AK295377|IL17RC|84818|interleukin 17 receptor C##AK315024|IL17RC|84818|interleukin 17 receptor C##AY359098|IL17RC|84818|interleukin 17 receptor C##NM_153461|IL17RC|84818|interleukin 17 receptor C##AK075534|IL17RC|84818|interleukin 17 receptor C##AK096824|IL17RC|84818|interleukin 17 receptor C##AK308241|IL17RC|84818|interleukin 17 receptor C##AF458065|IL17RC|84818|interleukin 17 receptor C##BC006411|IL17RC|84818|interleukin 17 receptor C##AK225650|IL17RC|84818|interleukin 17 receptor C##AY358840|IL17RC|84818|interleukin 17 receptor C##AK315053|IL17RC|84818|interleukin 17 receptor C##AK303171|IL17RC|84818|interleukin 17 receptor C##EF676032|IL17RC|84818|interleukin 17 receptor C##AF458069|IL17RE|132014|interleukin 17 receptor E##AY358451|IL17RE|132014|interleukin 17 receptor E##NM_001193380|IL17RE|132014|interleukin 17 receptor E##NM_153480|IL17RE|132014|interleukin 17 receptor E##BC063110|IL17RE|132014|interleukin 17 receptor E##AK074238|IL17RE|132014|interleukin 17 receptor E##AK096801|IL17RE|132014|interleukin 17 receptor E##AK298025|IL17RE|132014|interleukin 17 receptor E##AK096793|IL17RE|132014|interleukin 17 receptor E##AK314476|IL17RE|132014|interleukin 17 receptor E##AK297697|IL17RE|132014|interleukin 17 receptor E##NM_153483|IL17RE|132014|interleukin 17 receptor E##BC035478|IL17RE|132014|interleukin 17 receptor E##BC137077|IL17RE|132014|interleukin 17 receptor E##BC137078|IL17RE|132014|interleukin 17 receptor E##AL050275|CRELD1|78987|cysteine-rich with EGF-like domains 1##NM_015513|CRELD1|78987|cysteine-rich with EGF-like domains 1##NM_001031717|CRELD1|78987|cysteine-rich with EGF-like domains 1##NM_001077415|CRELD1|78987|cysteine-rich with EGF-like domains 1##BC008720|CRELD1|78987|cysteine-rich with EGF-like domains 1##AY358363|CRELD1|78987|cysteine-rich with EGF-like domains 1##AK314113|CRELD1|78987|cysteine-rich with EGF-like domains 1##BC089447|PRRT3|285368|proline-rich transmembrane protein 3##AY358158|PRRT3|285368|proline-rich transmembrane protein 3##AK090993|PRRT3|285368|proline-rich transmembrane protein 3##BC040508|PRRT3|285368|proline-rich transmembrane protein 3##NM_207351|PRRT3|285368|proline-rich transmembrane protein 3##BC022807|TMEM111|55831|transmembrane protein 111	0.331106	CTCF.p2:1:0.331
chr4	95049009	95049158	reg1017808.p1	8.106	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	-299022	+	AB209318 NM_001510 AK308611	-1823491	+	BC051694 NM_207491	-3892902	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	79728	+	TSC_hg19_v1_chr4_+_95129015 NM_001128429 NM_020159 BC045534 AY008271 BC041800	80031	+	TSC_hg19_v1_chr4_-_95263988 BC020734 AK290075 NM_014485	214923	-	BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase##AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase##NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase	0.972209	CTCF.p2:-12:0.972
chr8	37943912	37944044	reg1019467.p1	8.106	+	TSC_hg19_v1_chr8_+_37888059 NM_004095 BC004459 AB044548 AK312011 BC058073 DQ890570 DQ893731 AB590574 BT007162 CR456769 L36055	-55938	+	AY487247 FJ170286 FJ170287 BC075017 AK313857 X70811 AK309919 AK293033 NM_000025	-119894	-	S53291 TSC_hg19_v1_chr8_-_37822825	-121159	-	NM_004674 TSC_hg19_v1_chr8_+_37963033	19043	+	TSC_hg19_v1_chr8_+_37963046 AK291750 AK293699 AB020982 AF056718 AK298483 AB385056 AK311336	19106	+	NM_001105214 AK291938 AF056717 BC015936	19424	+	NM_004095|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##BC004459|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##AB044548|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##AK312011|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##BC058073|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##DQ890570|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##DQ893731|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##BT007162|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##CR456769|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##L36055|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##AY487247|ADRB3|155|adrenergic, beta-3-, receptor##FJ170286|ADRB3|155|adrenergic, beta-3-, receptor##FJ170287|ADRB3|155|adrenergic, beta-3-, receptor##BC075017|ADRB3|155|adrenergic, beta-3-, receptor##AK313857|ADRB3|155|adrenergic, beta-3-, receptor##X70811|ADRB3|155|adrenergic, beta-3-, receptor##AK309919|ADRB3|155|adrenergic, beta-3-, receptor##AK293033|ADRB3|155|adrenergic, beta-3-, receptor##NM_000025|ADRB3|155|adrenergic, beta-3-, receptor##S53291|ADRB3|155|adrenergic, beta-3-, receptor##NM_004674|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK291750|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK293699|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AB020982|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AF056718|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK298483|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK311336|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##NM_001105214|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK291938|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AF056717|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##BC015936|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)	0.299578	CTCF.p2:-3:0.300
chr2	79446645	79446758	reg1016090.p2	8.105	+	AK291973 AK311523 AK311523 AK311526 NM_138938 NM_002580 NM_138937	-59823	-	TSC_hg19_v1_chr2_+_79347612 AK291981 AK311087 M18963	-99081	+	AK307292 NM_002909 TSC_hg19_v1_chr2_+_79347583	-99165	+	NM_001164883 NM_004389 BC052996 TSC_hg19_v1_chr2_+_79740147 BC040458	293407	+	TSC_hg19_v1_chr2_+_79740175 AK295181	293514	+	AB587576 AY182024 HQ257885 TSC_hg19_v1_chr2_-_80530981	1084262	-	AK291973|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311526|REG3A|5068|regenerating islet-derived 3 alpha##NM_138938|REG3A|5068|regenerating islet-derived 3 alpha##NM_002580|REG3A|5068|regenerating islet-derived 3 alpha##NM_138937|REG3A|5068|regenerating islet-derived 3 alpha##AK291981|REG1A|5967|regenerating islet-derived 1 alpha##M18963|REG1A|5967|regenerating islet-derived 1 alpha##AK307292|REG1A|5967|regenerating islet-derived 1 alpha##NM_002909|REG1A|5967|regenerating islet-derived 1 alpha##NM_001164883|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_004389|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC052996|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC040458|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##AK295181|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##HQ257885|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	0.998184	CTCF.p2:4:0.998
chr12	95158157	95158263	reg1016756.p1	8.104	+	EU831778 EU831856 BC040535 NM_020698	-113946	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-304478	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-304568	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	239260	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	239306	-	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	309088	-	EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	0.978095	CTCF.p2:-37:0.978
chr4	20420627	20420756	reg1017442.p2	8.103	+	AB017168 NM_004787 BC117190 BC143978 AF133270	-165355	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-2397225	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-2608080	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	281376	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	564938	-	AY118170 DQ148489 NM_147183 AK290998	884878	-	AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4##AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4	0.998638	CTCF.p2:-18:0.999
chr10	12527422	12527534	reg1015772.p2	8.102	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-135701	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-135761	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	-135903	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	516221	-	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	614667	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	676090	+	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10	0.129047	
chr11	102702204	102702350	reg1017400.p2	8.102	+	TSC_hg19_v1_chr11_-_102668892 NM_001145938 NM_002421	-33349	-	AB463107 BT006874 BT020147 DQ890729 DQ893904 AK223035 BC013875 M15996 TSC_hg19_v1_chr11_-_102668890 AK024818 AK098450 AK130687 AK223281 AK297723 X05231 M13509 X54925 AK301340	-33421	-	BT007442 DQ891931 DQ895118 X07820 BC002591 AK222601 AK313960 NM_002425	-50938	-	DQ399598 CU686970 J03209 X05232 BC074815 BC074869 BC105954 BC107490 BC107491 AK313310 AK223283 AK223291 TSC_hg19_v1_chr11_-_102714339 BC069676 BC069716 NM_002422	12019	-	AB590529 HQ258263 L23808 AK313959 BC112301 BC143773 NM_002426	43437	-	AY256443 AY256444 HQ258010 X75308 BC067522 BC067523 BC074807 BC074808 AK315341 X81334 AK222748 AK292211 NM_002427	124170	-	NM_001145938|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##NM_002421|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##BT006874|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##BT020147|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##DQ890729|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##DQ893904|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK223035|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##BC013875|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##M15996|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK024818|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK098450|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK130687|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK223281|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK297723|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##X05231|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##M13509|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##X54925|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK301340|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##BT007442|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ891931|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ895118|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##X07820|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##BC002591|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##AK222601|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##AK313960|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##NM_002425|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ399598|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##J03209|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##X05232|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074815|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074869|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC105954|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107490|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107491|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK313310|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223283|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223291|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069676|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069716|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##NM_002422|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##HQ258263|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##L23808|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##AK313959|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##BC112301|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##BC143773|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##NM_002426|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##AY256443|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AY256444|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##HQ258010|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##X75308|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC067522|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC067523|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC074807|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC074808|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK315341|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##X81334|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK222748|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK292211|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##NM_002427|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)	0.0	
chr7	16958049	16958171	reg1016235.p1	8.102	+	AY359065 BC058284 NM_176813	-36506	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-113439	-	TSC_hg19_v1_chr7_+_16793401 AK093487 NM_014399 AK026587 AK075475 AK316595 AY358995 AF100759 BC033863 AF120265 DQ892059 DQ895252 CR542107	-164654	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	380159	+	TSC_hg19_v1_chr7_+_17382906 BC021696	424796	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	1021939	-	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK093487|TSPAN13|27075|tetraspanin 13##NM_014399|TSPAN13|27075|tetraspanin 13##AK026587|TSPAN13|27075|tetraspanin 13##AK075475|TSPAN13|27075|tetraspanin 13##AK316595|TSPAN13|27075|tetraspanin 13##AY358995|TSPAN13|27075|tetraspanin 13##AF100759|TSPAN13|27075|tetraspanin 13##BC033863|TSPAN13|27075|tetraspanin 13##AF120265|TSPAN13|27075|tetraspanin 13##DQ892059|TSPAN13|27075|tetraspanin 13##DQ895252|TSPAN13|27075|tetraspanin 13##CR542107|TSPAN13|27075|tetraspanin 13##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13	0.989898	CTCF.p2:4:0.990
chr7	51230532	51230676	reg1020147.p1	8.102	+	TSC_hg19_v1_chr7_-_50861150 NM_001001555	-369450	-	D86962 TSC_hg19_v1_chr7_-_50860699	-369915	-	AF000017 AB000731 AF001534 NM_001001549 NM_005311 U34355	-430571	-	AB385366 TSC_hg19_v1_chr7_-_51384416 BC136441 BC144099	153776	-	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	153882	-	NM_182595	1872744	+	NM_001001555|GRB10|2887|growth factor receptor-bound protein 10##D86962|GRB10|2887|growth factor receptor-bound protein 10##AF000017|GRB10|2887|growth factor receptor-bound protein 10##AB000731|GRB10|2887|growth factor receptor-bound protein 10##AF001534|GRB10|2887|growth factor receptor-bound protein 10##NM_001001549|GRB10|2887|growth factor receptor-bound protein 10##NM_005311|GRB10|2887|growth factor receptor-bound protein 10##U34355|GRB10|2887|growth factor receptor-bound protein 10##BC136441|COBL|23242|cordon-bleu homolog (mouse)##BC144099|COBL|23242|cordon-bleu homolog (mouse)##BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12	0.96417	CTCF.p2:3:0.964
chr1	18908025	18908153	reg1015831.p1	8.101	+	NM_152375	-100666	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	-473812	+	AK057339 NM_030812 BC028909 U20582	-826243	+	NM_001135254 NM_002584 NM_013945 X96743	49410	+	NM_152232 AB527225	278066	-	AK294552 NM_001161504	309295	-	NM_152375|KLHDC7A|127707|kelch domain containing 7A##AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1	0.354792	CTCF.p2:22:0.355
chr1	47343998	47344123	reg1016866.p1	8.101	+	AK300921 NM_000779 NM_001099772 AK225576 AK225578 AK313170 BC017758 AK307715 J02871 DQ892010 DQ895199 CU676044 AF491285 AY064484 AY064485 AY064486 AY151048 AY151049 X16699	-79349	+	TSC_hg19_v1_chr1_-_47184796 AK296777	-159244	-	TSC_hg19_v1_chr1_-_47184742 AB007963 NM_014774	-159324	-	TSC_hg19_v1_chr1_-_47407139 AK298267 AK298413 CU692736 D26481 D13705 L04751 BC041158 S67580 S67581	63057	-	TSC_hg19_v1_chr1_-_47407149 BC022851 NM_000778	63088	-	BC028102 NM_178033 AK098065 AY358537 AM040940 DQ891655 DQ891656 DQ894843 EU176287 CU688398	145303	+	AK300921|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##NM_000779|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##NM_001099772|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK225576|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK225578|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK313170|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##BC017758|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK307715|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##J02871|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##DQ892010|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##DQ895199|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AF491285|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY064484|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY064485|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY064486|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY151048|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY151049|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##X16699|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AB007963|KIAA0494|9813|KIAA0494##NM_014774|KIAA0494|9813|KIAA0494##AK298267|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##AK298413|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##D26481|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##D13705|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##L04751|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC041158|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##S67580|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##S67581|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC022851|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##NM_000778|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC028102|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##NM_178033|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AK098065|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AY358537|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AM040940|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891655|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891656|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ894843|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##EU176287|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1	0.036681	
chr15	96303837	96303998	reg1017331.p2	8.101	+	TSC_hg19_v1_chr15_-_95870310 BC040875	-433598	-	NM_001159644 BC025708 BC111024 AK002037	-1404608	+	NM_001159643 NM_018349 AY656717 BC131527	-1462456	+	BC106083 NM_001145155 FM208183	565244	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	570060	+	AK316086 NM_001145156	571876	+	BC040875|LOC400456|400456|uncharacterized LOC400456##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.893458	CTCF.p2:-19:0.893
chr18	68449218	68449351	reg1017714.p1	8.101	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-493023	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-493117	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-576346	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	1761491	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	1762446	-	AF448839 NM_138999	2083649	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.950281	CTCF.p2:4:0.950
chr2	122893767	122893894	reg1016940.p1	8.101	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-380593	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-399365	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-486185	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	1889034	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	4519877	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	4519962	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.042723	
chr4	44631416	44631542	reg1019299.p1	8.100	+	AK123347 NM_198353	-180656	-	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	-180926	-	AB528853 NM_001080476	-1736198	+	AK096895 BC103995 BC103996 NM_182592	22178	-	TSC_hg19_v1_chr4_+_44680469 NM_021927 BX647242 BC036768 BC012338 AK225314 AK023282 AK308667	48981	+	TSC_hg19_v1_chr4_-_44728574 AK296051 AB209904 AK055639 AY173948 AK129655 AK308920 AF247786 NM_138335	97085	-	AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7##NM_021927|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BX647242|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC036768|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC012338|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK225314|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK023282|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK308667|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	0.997779	CTCF.p2:19:0.998
chr6	22828771	22828925	reg1016730.p1	8.100	+	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	-259123	+	X54394 X54393 GQ305133 M58594 NM_001163558	-525801	-	BC015850 NM_000948	-531119	-	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	1297582	+	AF181722 NM_181337	1528282	+	AF181721 NM_016356	1529431	-	NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1##AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2	0.618233	CTCF.p2:20:0.618
chr2	204680133	204680261	reg1016657.p2	8.099	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	-108798	+	NM_001243077 NM_001243078 NM_006139 AJ517504 AK313313 J02988 TSC_hg19_v1_chr2_+_204571361 AK303421	-108917	+	TSC_hg19_v1_chr2_-_204399987 BC032486 AK096270 AB053311 AJ584699 AY494951 AY523977 AY523978 NM_203365 NM_213589	-280051	-	BC070162 AF414120 NM_001037631 NM_005214 AK313732 BC069566 BC074893 BC074842 AB590653 AF486806 AY209009 AY792514 AY999702 DQ785106 L15006	52390	+	AK314985 AJ277832 NM_012092 BC028006 BC028210 AB023135 AF218312 CU688368 CU688430	121297	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	730293	+	BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule##NM_001243077|CD28|940|CD28 molecule##NM_001243078|CD28|940|CD28 molecule##NM_006139|CD28|940|CD28 molecule##AJ517504|CD28|940|CD28 molecule##AK313313|CD28|940|CD28 molecule##J02988|CD28|940|CD28 molecule##AK303421|CD28|940|CD28 molecule##AK096270|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AB053311|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AJ584699|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY494951|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523977|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523978|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_203365|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_213589|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK314985|ICOS|29851|inducible T-cell co-stimulator##AJ277832|ICOS|29851|inducible T-cell co-stimulator##NM_012092|ICOS|29851|inducible T-cell co-stimulator##BC028006|ICOS|29851|inducible T-cell co-stimulator##BC028210|ICOS|29851|inducible T-cell co-stimulator##AB023135|ICOS|29851|inducible T-cell co-stimulator##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)	0.0	
chr11	112455514	112455642	reg1016052.p1	8.098	+	AY364435 NM_001145024	-323996	-	TSC_hg19_v1_chr11_+_112097100 NM_000317 BC018029 D17400 AK310768 BC009686 AK307133 M97655 AM392676 AM393300 AM393668 DQ890961 DQ894133	-358451	+	NM_001037290 AK027801 AK297853 AB096252	-408473	+	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 TSC_hg19_v1_chr11_+_112831996 AK314589	376409	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	376553	+	X16841 TSC_hg19_v1_chr11_+_112832212	376628	+	AY364435|C11orf34|349633|chromosome 11 open reading frame 34##NM_001145024|C11orf34|349633|chromosome 11 open reading frame 34##NM_000317|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC018029|PTS|5805|6-pyruvoyltetrahydropterin synthase##D17400|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK310768|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC009686|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK307133|PTS|5805|6-pyruvoyltetrahydropterin synthase##M97655|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM392676|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393300|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393668|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ890961|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ894133|PTS|5805|6-pyruvoyltetrahydropterin synthase##NM_001037290|BCO2|83875|beta-carotene oxygenase 2##AK027801|BCO2|83875|beta-carotene oxygenase 2##AK297853|BCO2|83875|beta-carotene oxygenase 2##AB096252|BCO2|83875|beta-carotene oxygenase 2##NM_000615|NCAM1|4684|neural cell adhesion molecule 1##NM_001076682|NCAM1|4684|neural cell adhesion molecule 1##NM_001242607|NCAM1|4684|neural cell adhesion molecule 1##NM_001242608|NCAM1|4684|neural cell adhesion molecule 1##NM_181351|NCAM1|4684|neural cell adhesion molecule 1##AK314589|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1	0.146655	
chr20	43940351	43940446	reg1016910.p1	8.097	+	BC151219 AK074595 BC141811 AK074597 NM_003833 NM_030590 NM_030592	-3456	-	NM_014276 AB024964 AB026048 AB027710	-4872	+	AF114471 X04503 AB464192 DQ891365 DQ894545 AK312192 X04470 TSC_hg19_v1_chr20_-_43883206 AX772818 BC020708 NM_003064	-57203	-	CR542045 CR542074 DQ890718 DQ893898 AB464261 TSC_hg19_v1_chr20_-_43977065 X67016 AK222695 AK223243 AK303964 AK312507 BC030805 D13292 NM_002999	36657	-	NM_001197129	50178	+	NM_001099791 NM_033542 TSC_hg19_v1_chr20_+_43991822 AK075264 AK172738 AX775821 BC048286 BC023562 AL591714 AK309429	51419	+	BC151219|MATN4|8785|matrilin 4##AK074595|MATN4|8785|matrilin 4##BC141811|MATN4|8785|matrilin 4##AK074597|MATN4|8785|matrilin 4##NM_003833|MATN4|8785|matrilin 4##NM_030590|MATN4|8785|matrilin 4##NM_030592|MATN4|8785|matrilin 4##NM_014276|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB024964|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB026048|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB027710|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AF114471|SLPI|6590|secretory leukocyte peptidase inhibitor##X04503|SLPI|6590|secretory leukocyte peptidase inhibitor##DQ891365|SLPI|6590|secretory leukocyte peptidase inhibitor##DQ894545|SLPI|6590|secretory leukocyte peptidase inhibitor##AK312192|SLPI|6590|secretory leukocyte peptidase inhibitor##X04470|SLPI|6590|secretory leukocyte peptidase inhibitor##AX772818|SLPI|6590|secretory leukocyte peptidase inhibitor##BC020708|SLPI|6590|secretory leukocyte peptidase inhibitor##NM_003064|SLPI|6590|secretory leukocyte peptidase inhibitor##CR542045|SDC4|6385|syndecan 4##CR542074|SDC4|6385|syndecan 4##DQ890718|SDC4|6385|syndecan 4##DQ893898|SDC4|6385|syndecan 4##X67016|SDC4|6385|syndecan 4##AK222695|SDC4|6385|syndecan 4##AK223243|SDC4|6385|syndecan 4##AK303964|SDC4|6385|syndecan 4##AK312507|SDC4|6385|syndecan 4##BC030805|SDC4|6385|syndecan 4##D13292|SDC4|6385|syndecan 4##NM_002999|SDC4|6385|syndecan 4##NM_001197129|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_001099791|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_033542|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK075264|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK172738|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC048286|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC023562|SYS1-DBNDD2|767557|SYS1-DBNDD2 readthrough##AL591714|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK309429|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	0.980693	CTCF.p2:4:0.981
chr3	105085527	105085649	reg1015599.p1	8.097	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	-8	+	AY090780 NM_175056 BC143817	-2931721	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-3517214	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	234	+	CR749655 TSC_hg19_v1_chr3_-_105421064	335466	-	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	502219	-	NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.0	
chr7	47294117	47294279	reg1016485.p2	8.097	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-1333392	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-1361064	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-1366093	+	TSC_hg19_v1_chr7_-_47579207 BC071791	285011	-	TSC_hg19_v1_chr7_-_47621681 CR749644	327465	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	327585	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.989811	CTCF.p2:0:0.990
chr11	102906821	102906966	reg1018097.p1	8.096	+	AY256443 AY256444 HQ258010 X75308 BC067522 BC067523 BC074807 BC074808 AK315341 X81334 AK222748 AK292211 NM_002427	-80446	-	AB590529 HQ258263 L23808 AK313959 BC112301 BC143773 NM_002426	-161179	-	DQ399598 CU686970 J03209 X05232 BC074815 BC074869 BC105954 BC107490 BC107491 AK313310 AK223283 AK223291 TSC_hg19_v1_chr11_-_102714339 BC069676 BC069716 NM_002422	-192597	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	55848	-	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	56030	-	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	73306	+	AY256443|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AY256444|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##HQ258010|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##X75308|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC067522|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC067523|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC074807|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC074808|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK315341|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##X81334|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK222748|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK292211|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##NM_002427|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##HQ258263|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##L23808|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##AK313959|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##BC112301|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##BC143773|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##NM_002426|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##DQ399598|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##J03209|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##X05232|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074815|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074869|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC105954|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107490|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107491|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK313310|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223283|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223291|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069676|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069716|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##NM_002422|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1	0.063409	
chr11	62537314	62537444	reg1017339.p1	8.096	+	TSC_hg19_v1_chr11_+_62529051 AK312131 BC112162 BC112164 U20659 AB464043	-8295	+	NM_002696 TSC_hg19_v1_chr11_+_62529028	-8351	+	DQ892842 EU176736 TSC_hg19_v1_chr11_-_62521626 BC025249 AK027045 NM_024784	-15785	-	NM_006473 TSC_hg19_v1_chr11_+_62538867 AK289499 AK310054 AK301145 BC008785 AK314330	1454	+	AK001998 TSC_hg19_v1_chr11_-_62554819	17428	-	TSC_hg19_v1_chr11_+_62554875 NM_199337 BC051355	17486	+	AK312131|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##BC112162|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##BC112164|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##U20659|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##NM_002696|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##DQ892842|ZBTB3|79842|zinc finger and BTB domain containing 3##EU176736|ZBTB3|79842|zinc finger and BTB domain containing 3##BC025249|ZBTB3|79842|zinc finger and BTB domain containing 3##AK027045|ZBTB3|79842|zinc finger and BTB domain containing 3##NM_024784|ZBTB3|79842|zinc finger and BTB domain containing 3##NM_006473|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK289499|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK310054|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK301145|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##BC008785|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK314330|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_199337|TMEM179B|374395|transmembrane protein 179B##BC051355|TMEM179B|374395|transmembrane protein 179B	0.0	
chr5	154996479	154996600	reg1016491.p1	8.096	+	NM_001099293 AK302388	-603253	+	TSC_hg19_v1_chr5_+_154320654 NM_001014990 NM_014180 AK000601 AK302784 CR933679 BC012565 AF161507 CU680362	-675890	+	TSC_hg19_v1_chr5_-_154317760 AB385260 AY063750 AK022748 BC113614 BC143724 BC036894 BC040931 AK074066 AK315101 NM_001252156 NM_015465	-678823	-	BX537948 NM_000337 NM_001128209 NM_172244	757221	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	757634	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	1393696	-	NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##NM_001014990|MRPL22|29093|mitochondrial ribosomal protein L22##NM_014180|MRPL22|29093|mitochondrial ribosomal protein L22##AK000601|MRPL22|29093|mitochondrial ribosomal protein L22##AK302784|MRPL22|29093|mitochondrial ribosomal protein L22##CR933679|MRPL22|29093|mitochondrial ribosomal protein L22##BC012565|MRPL22|29093|mitochondrial ribosomal protein L22##AF161507|MRPL22|29093|mitochondrial ribosomal protein L22##AY063750|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK022748|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC113614|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC143724|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC036894|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC040931|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK074066|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK315101|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_001252156|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_015465|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4	0.99642	CTCF.p2:5:0.996
chr1	15828046	15828131	reg1012099.p1	8.095	+	BC069412 BC069455 M16653 NM_015849 BC113540 BC113542 BC171735 HQ258147	-25483	+	NM_033440 BC007031 BC069331 BC069432 M16652 AK312198 M16631 D00236 CR450291	-44853	+	BC015118 CR749296 NM_007272 AK289447 BC059779 S82198	-63141	+	TSC_hg19_v1_chr1_-_15850711 AB020979 AF093130 AF110376 AJ781267 AY732490 BT006911 CU675417 DQ891693 U56390 AB590140 BC002452 AK292080 AB015653 AK292111	22615	-	TSC_hg19_v1_chr1_-_15850729 U60521	22658	-	TSC_hg19_v1_chr1_-_15850843 BC006463 AB209147 NM_001229 AK303743 NM_032996	22942	-	BC069412|CELA2B|51032|chymotrypsin-like elastase family, member 2B##BC069455|CELA2B|51032|chymotrypsin-like elastase family, member 2B##M16653|CELA2B|51032|chymotrypsin-like elastase family, member 2B##NM_015849|CELA2B|51032|chymotrypsin-like elastase family, member 2B##BC113540|CELA2B|51032|chymotrypsin-like elastase family, member 2B##BC113542|CELA2B|51032|chymotrypsin-like elastase family, member 2B##BC171735|CELA2B|51032|chymotrypsin-like elastase family, member 2B##HQ258147|CELA2B|51032|chymotrypsin-like elastase family, member 2B##NM_033440|CELA2A|63036|chymotrypsin-like elastase family, member 2A##BC007031|CELA2A|63036|chymotrypsin-like elastase family, member 2A##BC069331|CELA2A|63036|chymotrypsin-like elastase family, member 2A##BC069432|CELA2A|63036|chymotrypsin-like elastase family, member 2A##M16652|CELA2A|63036|chymotrypsin-like elastase family, member 2A##AK312198|CELA2A|63036|chymotrypsin-like elastase family, member 2A##M16631|CELA2A|63036|chymotrypsin-like elastase family, member 2A##D00236|CELA2A|63036|chymotrypsin-like elastase family, member 2A##CR450291|CELA2A|63036|chymotrypsin-like elastase family, member 2A##BC015118|CTRC|11330|chymotrypsin C (caldecrin)##CR749296|CTRC|11330|chymotrypsin C (caldecrin)##NM_007272|CTRC|11330|chymotrypsin C (caldecrin)##AK289447|CTRC|11330|chymotrypsin C (caldecrin)##BC059779|CTRC|11330|chymotrypsin C (caldecrin)##S82198|CTRC|11330|chymotrypsin C (caldecrin)##AB020979|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##AF093130|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##AF110376|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##AJ781267|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##AY732490|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##BT006911|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##DQ891693|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##U56390|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##BC002452|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##AK292080|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##AB015653|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##AK292111|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##U60521|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##BC006463|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##AB209147|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##NM_001229|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##AK303743|CASP9|842|caspase 9, apoptosis-related cysteine peptidase##NM_032996|CASP9|842|caspase 9, apoptosis-related cysteine peptidase	0.962711	CTCF.p2:-1:0.963
chr1	169435648	169435743	reg1014771.p2	8.095	+	AK098712 AK223354 AL049687 NM_021179 BC008388 BC008389 BC026073	-39013	-	TSC_hg19_v1_chr1_+_169337450 AK307151 AK291725 BC020716	-98246	+	NM_003666 AF288161 U79751 AK223533	-98472	+	AK304021 TSC_hg19_v1_chr1_-_169454976 AF272359 AJ237724	19287	-	AF160812 TSC_hg19_v1_chr1_-_169455181 AF135488 BC018514 AK313779 NM_006996 AF153330	19480	-	AB385005 AK226079 M14335 TSC_hg19_v1_chr1_-_169555700 M16967	119969	-	AK098712|C1orf114|57821|chromosome 1 open reading frame 114##AK223354|C1orf114|57821|chromosome 1 open reading frame 114##AL049687|C1orf114|57821|chromosome 1 open reading frame 114##NM_021179|C1orf114|57821|chromosome 1 open reading frame 114##BC008388|C1orf114|57821|chromosome 1 open reading frame 114##BC008389|C1orf114|57821|chromosome 1 open reading frame 114##BC026073|C1orf114|57821|chromosome 1 open reading frame 114##AK307151|BLZF1|8548|basic leucine zipper nuclear factor 1##AK291725|BLZF1|8548|basic leucine zipper nuclear factor 1##BC020716|BLZF1|8548|basic leucine zipper nuclear factor 1##NM_003666|BLZF1|8548|basic leucine zipper nuclear factor 1##AF288161|BLZF1|8548|basic leucine zipper nuclear factor 1##U79751|BLZF1|8548|basic leucine zipper nuclear factor 1##AK223533|BLZF1|8548|basic leucine zipper nuclear factor 1##AK304021|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AF272359|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AJ237724|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AF160812|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AF135488|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##BC018514|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AK313779|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##NM_006996|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AF153330|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AK226079|F5|2153|coagulation factor V (proaccelerin, labile factor)##M14335|F5|2153|coagulation factor V (proaccelerin, labile factor)##M16967|F5|2153|coagulation factor V (proaccelerin, labile factor)	0.993123	CTCF.p2:0:0.993
chr4	56420733	56420883	reg1018745.p1	8.095	+	TSC_hg19_v1_chr4_-_56412988 BC126157 BC126159 AF011568 NM_004898 AK291708 AK223549	-7817	-	TSC_hg19_v1_chr4_+_56262123 BC107582 AK290663 AK295289 BC104978 BC104980 AF132746 AF183409	-158570	+	TSC_hg19_v1_chr4_+_56262094 NM_018475	-158733	+	BC034431 NM_152401	37570	-	DQ891295 DQ894479 BC012908 NM_006681 X76029 TSC_hg19_v1_chr4_-_56502465	81604	-	TSC_hg19_v1_chr4_+_56719840 BC094751 NM_001024924 NM_018261 NM_178237 AK001755 AK027413	299057	+	BC126157|CLOCK|9575|clock homolog (mouse)##BC126159|CLOCK|9575|clock homolog (mouse)##AF011568|CLOCK|9575|clock homolog (mouse)##NM_004898|CLOCK|9575|clock homolog (mouse)##AK291708|CLOCK|9575|clock homolog (mouse)##AK223549|CLOCK|9575|clock homolog (mouse)##BC107582|TMEM165|55858|transmembrane protein 165##AK290663|TMEM165|55858|transmembrane protein 165##AK295289|TMEM165|55858|transmembrane protein 165##BC104978|TMEM165|55858|transmembrane protein 165##BC104980|TMEM165|55858|transmembrane protein 165##AF132746|TMEM165|55858|transmembrane protein 165##AF183409|TMEM165|55858|transmembrane protein 165##NM_018475|TMEM165|55858|transmembrane protein 165##BC034431|PDCL2|132954|phosducin-like 2##NM_152401|PDCL2|132954|phosducin-like 2##DQ891295|NMU|10874|neuromedin U##DQ894479|NMU|10874|neuromedin U##BC012908|NMU|10874|neuromedin U##NM_006681|NMU|10874|neuromedin U##X76029|NMU|10874|neuromedin U##BC094751|EXOC1|55763|exocyst complex component 1##NM_001024924|EXOC1|55763|exocyst complex component 1##NM_018261|EXOC1|55763|exocyst complex component 1##NM_178237|EXOC1|55763|exocyst complex component 1##AK001755|EXOC1|55763|exocyst complex component 1##AK027413|EXOC1|55763|exocyst complex component 1	0.998447	CTCF.p2:21:0.998
chr1	117671319	117671472	reg1017880.p2	8.093	+	AK023243 AK222901 BC034943 AY669488 NM_001145635 NM_025188	-7016	-	TSC_hg19_v1_chr1_+_117602948 AF073771 NM_003594 AF080255 BC015341 BC030058	-68441	+	AK291017 TSC_hg19_v1_chr1_+_117602939	-68471	+	AK303466 NM_001253849	75062	-	AY280972 DQ103757 AB590614 BC074729 AY346100 AY358352 AK026071 AK225413 AK310812 AY442303 BC065717 BX648021 DQ836392 NM_001253850 NM_024626	82133	-	TSC_hg19_v1_chr1_+_117910083 BC052954 AK307842 NM_006699 BC063300	238698	+	AK023243|TRIM45|80263|tripartite motif containing 45##AK222901|TRIM45|80263|tripartite motif containing 45##BC034943|TRIM45|80263|tripartite motif containing 45##AY669488|TRIM45|80263|tripartite motif containing 45##NM_001145635|TRIM45|80263|tripartite motif containing 45##NM_025188|TRIM45|80263|tripartite motif containing 45##AF073771|TTF2|8458|transcription termination factor, RNA polymerase II##NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II##AF080255|TTF2|8458|transcription termination factor, RNA polymerase II##BC015341|TTF2|8458|transcription termination factor, RNA polymerase II##BC030058|TTF2|8458|transcription termination factor, RNA polymerase II##AK291017|TTF2|8458|transcription termination factor, RNA polymerase II##AK303466|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253849|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY280972|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ103757|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC074729|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY346100|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY358352|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK026071|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK225413|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK310812|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY442303|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC065717|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BX648021|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ836392|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253850|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_024626|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC052954|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##AK307842|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##NM_006699|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC063300|MAN1A2|10905|mannosidase, alpha, class 1A, member 2	0.999593	CTCF.p2:4:1.000
chr18	54416062	54416158	reg1015557.p1	8.093	+	TSC_hg19_v1_chr18_+_54318593 AK057141 NM_015285 NM_052834 AB011113 BC150282	-97504	+	TSC_hg19_v1_chr18_-_54305956 BC001156 AF003938 NM_004786	-110196	-	AB209263 DQ891846 DQ895034 EU176640 TSC_hg19_v1_chr18_-_54305824 AF051896 AF052659 AK313653	-110363	-	TSC_hg19_v1_chr18_+_54424445 BC050352	8338	+	AK127964 TSC_hg19_v1_chr18_+_54814333 BC021740 BC035018 AK301799	398229	+	AB208996 NM_015879	603610	+	AK057141|WDR7|23335|WD repeat domain 7##NM_015285|WDR7|23335|WD repeat domain 7##NM_052834|WDR7|23335|WD repeat domain 7##AB011113|WDR7|23335|WD repeat domain 7##BC150282|WDR7|23335|WD repeat domain 7##BC001156|TXNL1|9352|thioredoxin-like 1##AF003938|TXNL1|9352|thioredoxin-like 1##NM_004786|TXNL1|9352|thioredoxin-like 1##AB209263|TXNL1|9352|thioredoxin-like 1##DQ891846|TXNL1|9352|thioredoxin-like 1##DQ895034|TXNL1|9352|thioredoxin-like 1##EU176640|TXNL1|9352|thioredoxin-like 1##AF051896|TXNL1|9352|thioredoxin-like 1##AF052659|TXNL1|9352|thioredoxin-like 1##AK313653|TXNL1|9352|thioredoxin-like 1##BC050352|WDR7|23335|WD repeat domain 7##AK127964|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC021740|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC035018|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK301799|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	0.9768	CTCF.p2:-18:0.977
chr11	64417001	64417118	reg1016810.p1	8.092	+	TSC_hg19_v1_chr11_-_64410785 NM_138734	-6268	-	BC043422 TSC_hg19_v1_chr11_-_64377473	-39657	-	AB050269 NM_144585 NM_153378	-58778	+	TSC_hg19_v1_chr11_-_64490666 AB023138 BC150275 NM_015080 NM_138732	73606	-	HQ258466 AB590919 TSC_hg19_v1_chr11_-_64510439	93337	-	TSC_hg19_v1_chr11_-_64510461 AK314637	93409	-	NM_138734|NRXN2|9379|neurexin 2##AB050269|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_144585|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_153378|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##AB023138|NRXN2|9379|neurexin 2##BC150275|NRXN2|9379|neurexin 2##NM_015080|NRXN2|9379|neurexin 2##NM_138732|NRXN2|9379|neurexin 2##HQ258466|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AK314637|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)	0.485668	CTCF.p2:12:0.486
chr18	55626625	55626756	reg1018583.p1	8.092	+	TSC_hg19_v1_chr18_-_55470548 NM_005603	-156220	-	NM_001242804 BC040476	-329133	+	TSC_hg19_v1_chr18_-_55289034 AK293985 NM_004539	-337589	-	TSC_hg19_v1_chr18_+_55711515 NM_001144967 NM_001243960 NM_015277	84846	+	TSC_hg19_v1_chr18_+_55711771 AB071179	85094	+	DQ890913 DQ893350 AY312514 TSC_hg19_v1_chr18_+_55711911	85216	+	NM_005603|ATP8B1|5205|ATPase, aminophospholipid transporter, class I, type 8B, member 1##NM_001242804|LOC100505549|100505549|uncharacterized LOC100505549##BC040476|LOC100505549|100505549|uncharacterized LOC100505549##AK293985|NARS|4677|asparaginyl-tRNA synthetase##NM_004539|NARS|4677|asparaginyl-tRNA synthetase##NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001243960|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB071179|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.986535	CTCF.p2:-24:0.987
chr2	18360152	18360267	reg1016466.p2	8.092	+	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	-300255	+	NM_001105569	-362424	+	TSC_hg19_v1_chr2_+_17935407 CR936783 NM_001130009 AK093631 AX748233	-424798	+	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	381707	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	410601	-	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	1198170	-	AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_001105569|MSGN1|343930|mesogenin 1##CR936783|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##NM_001130009|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK093631|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)	0.468616	CTCF.p2:-1:0.469
chr2	3828499	3828640	reg1018463.p1	8.091	+	AK302299 NM_018436 BC029652	-122772	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-186000	+	X74803 TSC_hg19_v1_chr2_+_3627765	-200824	+	U23752 AB028641 NM_003108 BC025789 AB464713	2004246	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	3177331	-	TSC_hg19_v1_chr2_-_7006650 AK308509	3178134	-	AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##X74803|RPS7|6201|ribosomal protein S7##U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	0.527718	CTCF.p2:9:0.528
chr5	142783268	142783378	reg1010376.p1	8.091	+	TSC_hg19_v1_chr5_-_142783232 NM_000176 NM_001020825 NM_001024094 NM_001204258 NM_001204259 NM_001204260 NM_001204261 NM_001204262 NM_001204263 NM_001204264 NM_001204265 U01351	-84	-	BC015610 TSC_hg19_v1_chr5_-_142783214	-112	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	-217	-	TSC_hg19_v1_chr5_-_142783310 AJ888004	44	-	TSC_hg19_v1_chr5_-_142784036 AK302050 NM_001018076	709	-	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	843	-	NM_000176|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001020825|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001024094|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204258|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204259|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204260|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204261|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204262|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204263|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204264|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001204265|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##U01351|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ888004|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr8	41004015	41004124	reg1015433.p1	8.091	+	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	-248732	-	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	-993051	+	AK128691 NM_194294	-1211596	+	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	162961	-	TSC_hg19_v1_chr8_+_41348077 NM_001174124 NM_016099	344004	+	TSC_hg19_v1_chr8_+_41348100 AK026613	344030	+	BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1##NM_001174124|GOLGA7|51125|golgin A7##NM_016099|GOLGA7|51125|golgin A7##AK026613|GOLGA7|51125|golgin A7	0.142079	
chr7	123793060	123793162	reg1016609.p2	8.090	+	TSC_hg19_v1_chr7_-_123673486 NM_001136002	-119607	-	AK292229 NM_001174045 NM_001174046 AY920280 AY920281	-227191	+	NM_001174044 NM_003117 NM_153189 AY920278 AY920279 S67798 BC026163	-227785	+	AF502281 CU691802 AB464545 AF017262 TSC_hg19_v1_chr7_-_124405121	611964	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	612685	-	BC130600 BC130604 NM_001024603	637691	-	NM_001136002|TMEM229A|730130|transmembrane protein 229A##AK292229|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174045|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174046|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920280|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920281|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174044|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_003117|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_153189|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920278|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920279|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##S67798|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##BC026163|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AF502281|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##AF017262|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872	0.0	
chr7	84816137	84816248	reg1015652.p1	8.090	+	NM_152754	-64946	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-991870	-	NM_012431	-1537714	-	AK309116 TSC_hg19_v1_chr7_-_84816296	43	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	1457033	+	AK291406 TSC_hg19_v1_chr7_+_86273870	1457679	+	NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3##AK291406|GRM3|2913|glutamate receptor, metabotropic 3	0.0	
chr12	124066782	124066909	reg1015078.p1	8.088	+	TSC_hg19_v1_chr12_-_124018501 AK096697	-48348	-	BC089444 TSC_hg19_v1_chr12_-_124018263 NM_178314	-48671	-	BC093671 BC111955 NM_180699	-122460	+	TSC_hg19_v1_chr12_-_124068867 AK125282	2030	-	TSC_hg19_v1_chr12_+_124069077 NM_006815	2220	+	TSC_hg19_v1_chr12_+_124069098 AK298167 AK312975 AK303189	2244	+	AK096697|RILPL1|353116|Rab interacting lysosomal protein-like 1##BC089444|RILPL1|353116|Rab interacting lysosomal protein-like 1##NM_178314|RILPL1|353116|Rab interacting lysosomal protein-like 1##BC093671|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC111955|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##NM_180699|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##NM_006815|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK298167|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK312975|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK303189|TMED2|10959|transmembrane emp24 domain trafficking protein 2	0.013339	
chr22	38259623	38259730	reg1016703.p2	8.088	+	AL357455 CU674548 CU688616 TSC_hg19_v1_chr22_+_38245452 DQ891842 DQ893595 DQ895030 EU176311 AK093540 AX748192	-14208	+	AK298776 TSC_hg19_v1_chr22_+_38245447 AF077207	-14228	+	TSC_hg19_v1_chr22_+_38245444 BC029265 BC001101 BC007510 AF109359	-14238	+	TSC_hg19_v1_chr22_+_38302165 NM_033386	42453	+	TSC_hg19_v1_chr22_+_38302345 AJ496196 CR456437 AB463117 BC142605 BC143050 CU013036 CU013324 AL834373	42722	+	CR456440 BC031998 AK057349 NM_032561 NM_001207062	89928	-	AL357455|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ891842|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ893595|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ895030|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##EU176311|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##AK093540|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##AK298776|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##AF077207|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##BC029265|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##BC001101|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##BC007510|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##AF109359|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##NM_033386|MICALL1|85377|MICAL-like 1##AJ496196|MICALL1|85377|MICAL-like 1##CR456437|MICALL1|85377|MICAL-like 1##BC142605|MICALL1|85377|MICAL-like 1##BC143050|MICALL1|85377|MICAL-like 1##AL834373|MICALL1|85377|MICAL-like 1##CR456440|C22orf23|84645|chromosome 22 open reading frame 23##BC031998|C22orf23|84645|chromosome 22 open reading frame 23##AK057349|C22orf23|84645|chromosome 22 open reading frame 23##NM_032561|C22orf23|84645|chromosome 22 open reading frame 23##NM_001207062|C22orf23|84645|chromosome 22 open reading frame 23	0.999675	CTCF.p2:5:1.000
chr4	37795295	37795412	reg1016298.p1	8.088	+	TSC_hg19_v1_chr4_-_37687999 BC039540 AK075468 NM_001085399 NM_001085400	-107380	-	AK001879 NM_018302 AK225192	-209484	+	NM_001104629 BC037906	-339778	+	TSC_hg19_v1_chr4_+_37828307 NM_018290 AL136705 AK310927	32947	+	TSC_hg19_v1_chr4_+_37828339 AK223237 AK303374 AF109360 BC010087 AK001845 AK297752 CR457274 CU679607	32990	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	97436	+	BC039540|RELL1|768211|RELT-like 1##AK075468|RELL1|768211|RELT-like 1##NM_001085399|RELL1|768211|RELT-like 1##NM_001085400|RELL1|768211|RELT-like 1##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##NM_018290|PGM2|55276|phosphoglucomutase 2##AL136705|PGM2|55276|phosphoglucomutase 2##AK310927|PGM2|55276|phosphoglucomutase 2##AK223237|PGM2|55276|phosphoglucomutase 2##AK303374|PGM2|55276|phosphoglucomutase 2##AF109360|PGM2|55276|phosphoglucomutase 2##BC010087|PGM2|55276|phosphoglucomutase 2##AK001845|PGM2|55276|phosphoglucomutase 2##AK297752|PGM2|55276|phosphoglucomutase 2##CR457274|PGM2|55276|phosphoglucomutase 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1	0.523729	CTCF.p2:23:0.524
chr9	7052705	7052833	reg1017941.p1	8.088	+	TSC_hg19_v1_chr9_+_6757984 AB018323 AK304095 AK314355 AB037901 BC008296 AK303651 AK304032 BC104859 BC104861 BC143571	-294730	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	-295102	+	AK310439 NM_001146696	-331907	+	AL137489 TSC_hg19_v1_chr9_-_7799779 BC009510 AK308643 AK128876 AK292632 NM_033428	746946	-	TSC_hg19_v1_chr9_+_8713275 AY779046	1660523	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	1681150	-	AB018323|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304095|KDM4C|23081|lysine (K)-specific demethylase 4C##AK314355|KDM4C|23081|lysine (K)-specific demethylase 4C##AB037901|KDM4C|23081|lysine (K)-specific demethylase 4C##BC008296|KDM4C|23081|lysine (K)-specific demethylase 4C##AK303651|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304032|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104859|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104861|KDM4C|23081|lysine (K)-specific demethylase 4C##BC143571|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##AL137489|C9orf123|90871|chromosome 9 open reading frame 123##BC009510|C9orf123|90871|chromosome 9 open reading frame 123##AK292632|C9orf123|90871|chromosome 9 open reading frame 123##NM_033428|C9orf123|90871|chromosome 9 open reading frame 123##AY779046|RPL18A|6142|ribosomal protein L18a##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	0.670423	CTCF.p2:6:0.670
chr3	107565223	107565354	reg1019654.p1	8.087	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-323439	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-468978	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-605696	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	244585	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	376004	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	450113	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.058408	
chr5	58663752	58663855	reg1015751.p1	8.087	+	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	-11060	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	-91873	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	-328425	-	U50159 NM_006203 L20970	218496	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	400545	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	400652	-	AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.914382	CTCF.p2:4:0.914
chr10	35283709	35283858	reg1017087.p1	8.086	+	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	-179632	-	TSC_hg19_v1_chr10_-_33623996 BX648025	-1659785	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1659969	-	AK310225 AK300491 NM_001198778 NM_001198779	79429	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	95489	-	TSC_hg19_v1_chr10_-_35379513 BC095405 BC110901 AL832733 AK095217 NM_001198777	95741	-	AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2##BC095405|CUL2|8453|cullin 2##BC110901|CUL2|8453|cullin 2##AL832733|CUL2|8453|cullin 2##AK095217|CUL2|8453|cullin 2##NM_001198777|CUL2|8453|cullin 2	0.894692	CTCF.p2:0:0.895
chr3	159706425	159706577	reg1018980.p1	8.086	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	-148642	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	-148808	+	TSC_hg19_v1_chr3_+_159481881 AK309223	-224539	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	231	+	TSC_hg19_v1_chr3_+_159943306 NM_001168214	236836	+	BC031660 TSC_hg19_v1_chr3_+_159943777	237202	+	BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##AK309223|SCHIP1|29970|schwannomin interacting protein 1##NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80##BC031660|C3orf80|401097|chromosome 3 open reading frame 80	0.676418	CTCF.p2:-1:0.676
chr3	96532086	96532201	reg1012765.p2	8.086	+	AK122674 NM_001195643	-2750077	-	TSC_hg19_v1_chr3_+_93781863 AF169972 BC018432 BC020602 BC057238 NM_022072 AK026262	-2750299	+	BC045541 TSC_hg19_v1_chr3_-_93781761 AL832912 BC063379 NM_176815	-2750399	-	NM_001080448 TSC_hg19_v1_chr3_+_96533435 AK092565 AX747601	1287	+	AK302040 AK310249 BC031881 BC067287 AK302080 AL133666 NM_173655	626328	+	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	951457	+	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1##AF169972|NSUN3|63899|NOP2/Sun domain family, member 3##BC018432|NSUN3|63899|NOP2/Sun domain family, member 3##BC020602|NSUN3|63899|NOP2/Sun domain family, member 3##BC057238|NSUN3|63899|NOP2/Sun domain family, member 3##NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3##AK026262|NSUN3|63899|NOP2/Sun domain family, member 3##BC045541|DHFRL1|200895|dihydrofolate reductase-like 1##AL832912|DHFRL1|200895|dihydrofolate reductase-like 1##BC063379|DHFRL1|200895|dihydrofolate reductase-like 1##NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001080448|EPHA6|285220|EPH receptor A6##AK092565|EPHA6|285220|EPH receptor A6##AK302040|EPHA6|285220|EPH receptor A6##AK310249|EPHA6|285220|EPH receptor A6##BC031881|EPHA6|285220|EPH receptor A6##BC067287|EPHA6|285220|EPH receptor A6##AK302080|EPHA6|285220|EPH receptor A6##AL133666|EPHA6|285220|EPH receptor A6##NM_173655|EPHA6|285220|EPH receptor A6##BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6	0.0	
chr11	118936273	118936372	reg1016494.p1	8.085	+	TSC_hg19_v1_chr11_-_118927914 BC004560 AK299648 AK307624 NM_006389 NM_001130991	-8412	-	TSC_hg19_v1_chr11_-_118927854 AK127324	-8463	-	TSC_hg19_v1_chr11_-_118927846 AK222756 AK294905 DQ350134 DQ372932 AK301514 AK314178 AK304264	-8481	-	TSC_hg19_v1_chr11_+_118938511 AK023279 AB027508 NM_021729 AK056701 AK223158	2170	+	TSC_hg19_v1_chr11_+_118938517 AL834218	2199	+	BC065563 TSC_hg19_v1_chr11_+_118938528	2206	+	BC004560|HYOU1|10525|hypoxia up-regulated 1##AK299648|HYOU1|10525|hypoxia up-regulated 1##AK307624|HYOU1|10525|hypoxia up-regulated 1##NM_006389|HYOU1|10525|hypoxia up-regulated 1##NM_001130991|HYOU1|10525|hypoxia up-regulated 1##AK127324|HYOU1|10525|hypoxia up-regulated 1##AK222756|HYOU1|10525|hypoxia up-regulated 1##AK294905|HYOU1|10525|hypoxia up-regulated 1##DQ350134|HYOU1|10525|hypoxia up-regulated 1##DQ372932|HYOU1|10525|hypoxia up-regulated 1##AK301514|HYOU1|10525|hypoxia up-regulated 1##AK314178|HYOU1|10525|hypoxia up-regulated 1##AK304264|HYOU1|10525|hypoxia up-regulated 1##AK023279|VPS11|55823|vacuolar protein sorting 11 homolog (S. cerevisiae)##AB027508|VPS11|55823|vacuolar protein sorting 11 homolog (S. cerevisiae)##NM_021729|VPS11|55823|vacuolar protein sorting 11 homolog (S. cerevisiae)##AK056701|VPS11|55823|vacuolar protein sorting 11 homolog (S. cerevisiae)##AK223158|VPS11|55823|vacuolar protein sorting 11 homolog (S. cerevisiae)##AL834218|VPS11|55823|vacuolar protein sorting 11 homolog (S. cerevisiae)##BC065563|VPS11|55823|vacuolar protein sorting 11 homolog (S. cerevisiae)	0.129671	
chr17	12449379	12449500	reg1015700.p1	8.085	+	TSC_hg19_v1_chr17_+_11924150 BC036032 NM_003010 BC060764 AK131544 AK313053 U17743 AK294923 L36870 BC050386 AB590846 BT019676 CR536564	-525258	+	AK092656 AX747657 NM_144680 TSC_hg19_v1_chr17_-_11900782 AY491053 AK127908	-548686	-	NM_004662 X99947	-663219	+	NM_001146312 NM_153604 TSC_hg19_v1_chr17_+_12569210 AY764180	119770	+	AK128608 TSC_hg19_v1_chr17_+_12569334 AK292885	119882	+	TSC_hg19_v1_chr17_+_12569389 BC126307 BC143391 AF532596	119995	+	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4##NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4##U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4##L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4##CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK092656|ZNF18|7566|zinc finger protein 18##NM_144680|ZNF18|7566|zinc finger protein 18##AY491053|ZNF18|7566|zinc finger protein 18##AK127908|ZNF18|7566|zinc finger protein 18##NM_004662|DNAH9|1770|dynein, axonemal, heavy chain 9##X99947|DNAH9|1770|dynein, axonemal, heavy chain 9##NM_001146312|MYOCD|93649|myocardin##NM_153604|MYOCD|93649|myocardin##AY764180|MYOCD|93649|myocardin##AK128608|MYOCD|93649|myocardin##AK292885|MYOCD|93649|myocardin##BC126307|MYOCD|93649|myocardin##BC143391|MYOCD|93649|myocardin##AF532596|MYOCD|93649|myocardin	0.801786	CTCF.p2:-23:0.802
chr2	38211880	38212007	reg1017061.p2	8.085	+	NM_001170793 NM_144713 AK057516 AF435956	-34343	+	BC024243 NM_001170792	-56042	+	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	-59511	+	U03688 BC012049 TSC_hg19_v1_chr2_-_38303294 AK297039 AK303862	91339	-	TSC_hg19_v1_chr2_-_38303315 AK312686 NM_000104	91377	-	AK316179 TSC_hg19_v1_chr2_-_38525609	313626	-	NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1##BC024243|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1##U03688|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##BC012049|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK303862|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK312686|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_000104|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK316179|ATL2|64225|atlastin GTPase 2	0.965902	CTCF.p2:-20:0.966
chr3	31810386	31810493	reg1014643.p2	8.085	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	-235957	+	TSC_hg19_v1_chr3_+_31574468 AK074587	-235990	+	TSC_hg19_v1_chr3_+_31574119 AK311488	-236309	+	TSC_hg19_v1_chr3_-_32022751 BC003168 AF346291 AK304067 AK097503	212330	-	AK294003 NM_001137674	212826	+	AF392451 NM_001174060 NM_017784	212850	-	AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##BC003168|OSBPL10|114884|oxysterol binding protein-like 10##AF346291|OSBPL10|114884|oxysterol binding protein-like 10##AK304067|OSBPL10|114884|oxysterol binding protein-like 10##AK294003|ZNF860|344787|zinc finger protein 860##NM_001137674|ZNF860|344787|zinc finger protein 860##AF392451|OSBPL10|114884|oxysterol binding protein-like 10##NM_001174060|OSBPL10|114884|oxysterol binding protein-like 10##NM_017784|OSBPL10|114884|oxysterol binding protein-like 10	0.998043	CTCF.p2:10:0.998
chr5	79174689	79174784	reg1014881.p1	8.085	+	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-189064	+	AK095818 TSC_hg19_v1_chr5_+_78908395	-266315	+	TSC_hg19_v1_chr5_+_78908296 BC026061	-266421	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	112222	-	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	156428	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	377149	-	BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##AK095818|PAPD4|167153|PAP associated domain containing 4##BC026061|PAPD4|167153|PAP associated domain containing 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5	0.066095	
chr9	42368042	42368146	reg1017364.p1	8.085	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-413180	-	BC040528 NM_001113541 NM_015667	-867416	+	BC040528 NM_001113541 NM_015667 NM_001242613	-1040715	-	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	264	+	NM_001099279 NM_199244	349139	+	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	765393	-	BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2	0.757079	CTCF.p2:-11:0.757
chr11	43043159	43043294	reg1017807.p2	8.084	+	AB046800 NM_020929	-2727563	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-2728632	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-6423424	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	290292	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	290338	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	290414	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.995009	CTCF.p2:0:0.995
chr8	24923172	24923311	reg1019664.p1	8.084	+	AY156690 CU688222 CU691684 AB463926 DQ892646 DQ895884 AK075003 AK127430 AK225975 AK299095 AK314591 BC039237 BC066952 TSC_hg19_v1_chr8_-_24814127 AK057731 NM_006158	-109161	-	TSC_hg19_v1_chr8_+_24774588 AF181990	-148608	+	NM_001105541 AK294681	-150766	+	TSC_hg19_v1_chr8_+_25042229 BC015352	118916	+	TSC_hg19_v1_chr8_+_25042294 BC011877 NM_024940 AK123607	119036	+	BC137175 BC137176 TSC_hg19_v1_chr8_+_25042406	119159	+	AY156690|NEFL|4747|neurofilament, light polypeptide##DQ892646|NEFL|4747|neurofilament, light polypeptide##DQ895884|NEFL|4747|neurofilament, light polypeptide##AK075003|NEFL|4747|neurofilament, light polypeptide##AK127430|NEFL|4747|neurofilament, light polypeptide##AK225975|NEFL|4747|neurofilament, light polypeptide##AK299095|NEFL|4747|neurofilament, light polypeptide##AK314591|NEFL|4747|neurofilament, light polypeptide##BC039237|NEFL|4747|neurofilament, light polypeptide##BC066952|NEFL|4747|neurofilament, light polypeptide##AK057731|NEFL|4747|neurofilament, light polypeptide##NM_006158|NEFL|4747|neurofilament, light polypeptide##AF181990|NEFM|4741|neurofilament, medium polypeptide##NM_001105541|NEFM|4741|neurofilament, medium polypeptide##AK294681|NEFM|4741|neurofilament, medium polypeptide##BC015352|DOCK5|80005|dedicator of cytokinesis 5##BC011877|DOCK5|80005|dedicator of cytokinesis 5##NM_024940|DOCK5|80005|dedicator of cytokinesis 5##AK123607|DOCK5|80005|dedicator of cytokinesis 5##BC137175|DOCK5|80005|dedicator of cytokinesis 5##BC137176|DOCK5|80005|dedicator of cytokinesis 5	0.853449	CTCF.p2:4:0.853
chr10	101390327	101390468	reg1020765.p1	8.083	+	TSC_hg19_v1_chr10_-_101380229 NM_031212	-10174	-	BC076399 TSC_hg19_v1_chr10_-_101380197 BC047312	-10217	-	TSC_hg19_v1_chr10_-_101380086 AF327403 AJ303078 AF327402 AJ303077 BC058937	-10290	-	TSC_hg19_v1_chr10_+_101419285 AK314542 AK055540 AK309735 NM_020354 BC119008 BC122857 AF269255	28837	+	BT007129 DQ890710 DQ893892 BC002382 BC013403 TSC_hg19_v1_chr10_-_101491845 BC078161 AK291654 AK298864	101432	-	AF026850 AF044323 TSC_hg19_v1_chr10_-_101491885	101479	-	NM_031212|SLC25A28|81894|solute carrier family 25, member 28##BC076399|SLC25A28|81894|solute carrier family 25, member 28##BC047312|SLC25A28|81894|solute carrier family 25, member 28##AF327403|SLC25A28|81894|solute carrier family 25, member 28##AJ303078|SLC25A28|81894|solute carrier family 25, member 28##AF327402|SLC25A28|81894|solute carrier family 25, member 28##AJ303077|SLC25A28|81894|solute carrier family 25, member 28##BC058937|SLC25A28|81894|solute carrier family 25, member 28##AK314542|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##AK055540|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##AK309735|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##NM_020354|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##BC119008|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##BC122857|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##AF269255|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##BT007129|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##DQ890710|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##DQ893892|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##BC002382|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##BC013403|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##BC078161|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AK291654|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AK298864|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AF026850|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AF044323|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)	0.907062	CTCF.p2:-7:0.907
chr12	124103141	124103276	reg1015661.p1	8.083	+	TSC_hg19_v1_chr12_+_124086677 AK307384 AK301043 AK074219 NM_020936 AL833756 BC030020 CU688806	-16534	+	TSC_hg19_v1_chr12_+_124069100 X92098 BC025957 CU693080 CR541663 CR541682	-34067	+	TSC_hg19_v1_chr12_+_124069098 AK298167 AK312975 AK303189	-34119	+	CR456831 AB528638 BC104188 BC104189 X95648 TSC_hg19_v1_chr12_-_124118195 BC103763	14941	-	TSC_hg19_v1_chr12_-_124118210 AK294815 NM_001414	15051	-	TSC_hg19_v1_chr12_+_124118375 AK298128 AK313200 BC014570 NM_001516 BC016767 BC065250 AB463683 EU446895 CU688028 Z30093	15151	+	AK307384|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##AK301043|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##AK074219|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##NM_020936|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##AL833756|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##BC030020|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##X92098|TMED2|10959|transmembrane emp24 domain trafficking protein 2##BC025957|TMED2|10959|transmembrane emp24 domain trafficking protein 2##CR541663|TMED2|10959|transmembrane emp24 domain trafficking protein 2##CR541682|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK298167|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK312975|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK303189|TMED2|10959|transmembrane emp24 domain trafficking protein 2##CR456831|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##BC104188|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##BC104189|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##X95648|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##BC103763|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##AK294815|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##NM_001414|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##AK298128|GTF2H3|2967|general transcription factor IIH, polypeptide 3, 34kDa##AK313200|GTF2H3|2967|general transcription factor IIH, polypeptide 3, 34kDa##BC014570|GTF2H3|2967|general transcription factor IIH, polypeptide 3, 34kDa##NM_001516|GTF2H3|2967|general transcription factor IIH, polypeptide 3, 34kDa##BC065250|GTF2H3|2967|general transcription factor IIH, polypeptide 3, 34kDa##EU446895|GTF2H3|2967|general transcription factor IIH, polypeptide 3, 34kDa##Z30093|GTF2H3|2967|general transcription factor IIH, polypeptide 3, 34kDa	0.996801	CTCF.p2:14:0.997
chr15	95569513	95569620	reg1015136.p1	8.083	+	NM_001159644 BC025708 BC111024 AK002037	-670257	+	NM_001159643 NM_018349 AY656717 BC131527	-728105	+	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	-794708	+	TSC_hg19_v1_chr15_-_95870310 BC040875	300753	-	BC106083 NM_001145155 FM208183	1299595	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	1304411	+	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##BC040875|LOC400456|400456|uncharacterized LOC400456##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.965002	CTCF.p2:1:0.965
chr6	146082873	146083001	reg1019009.p1	8.083	+	TSC_hg19_v1_chr6_-_146056897 AF284580 NM_001018041 NM_005670 AF454491 AK299497	-25910	-	BC070047 TSC_hg19_v1_chr6_-_146056659	-26277	-	AF454494 TSC_hg19_v1_chr6_-_146056628 AF454493 BC005286 AF084535	-26336	-	TSC_hg19_v1_chr6_-_146135899 BC024326	52923	-	TSC_hg19_v1_chr6_-_146135919 NM_032145	52985	-	TSC_hg19_v1_chr6_+_146136030 AK311235	53101	+	AF284580|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##NM_001018041|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##NM_005670|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454491|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AK299497|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##BC070047|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454494|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454493|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##BC005286|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF084535|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##BC024326|FBXO30|84085|F-box protein 30##NM_032145|FBXO30|84085|F-box protein 30##AK311235|LOC100507557|100507557|uncharacterized LOC100507557	0.751571	CTCF.p2:-28:0.740
chr14	70193586	70193766	reg1000557.p1	8.082	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	-115285	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	-115366	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	-242196	+	TSC_hg19_v1_chr14_+_70233809 BX640605	40130	+	BC095420 TSC_hg19_v1_chr14_+_70233810	40134	+	TSC_hg19_v1_chr14_+_70233856 AK311805 NM_001039465 NM_006925	40158	+	D87434|KIAA0247|9766|KIAA0247##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BX640605|SRSF5|6430|serine/arginine-rich splicing factor 5##BC095420|SRSF5|6430|serine/arginine-rich splicing factor 5##AK311805|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_001039465|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_006925|SRSF5|6430|serine/arginine-rich splicing factor 5	0.041076	
chr15	25747094	25747202	reg1015041.p2	8.082	+	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	-62970	-	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	-63047	-	L07557 NM_130838	-96499	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	361205	-	AB051358 TSC_hg19_v1_chr15_-_26108932	361752	-	AK295167 NM_001191321 TSC_hg19_v1_chr15_-_26874238 BC038837	1127132	-	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##AB051358|ATP10A|57194|ATPase, class V, type 10A##AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	0.944435	CTCF.p2:-8:0.944
chr3	67088142	67088280	reg1017449.p1	8.082	+	NM_032505 AK096640 AK300397	-39483	+	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	-536747	-	AF381545 BC140907 NM_015541 AY730707	-537359	-	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	616851	-	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	616939	+	AY325114 NM_001252216	952522	+	NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AY325114|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##NM_001252216|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1	0.18915	
chr7	151267545	151267646	reg1015172.p1	8.082	+	TSC_hg19_v1_chr7_-_151216982 BC107705 AK125446 BC016155 NM_005614	-50610	-	TSC_hg19_v1_chr7_-_151216769 BC066307	-50826	-	TSC_hg19_v1_chr7_-_151216740 AK289370 AF148645	-50877	-	TSC_hg19_v1_chr7_-_151329284 BT007127 BC020540 AB025580 AF087875 AK314646 AK001887 NM_024429	61685	-	BC068598 TSC_hg19_v1_chr7_-_151511929 NM_001040633	244345	-	AK074675 NM_016203	306667	-	BC107705|RHEB|6009|Ras homolog enriched in brain##AK125446|RHEB|6009|Ras homolog enriched in brain##BC016155|RHEB|6009|Ras homolog enriched in brain##NM_005614|RHEB|6009|Ras homolog enriched in brain##BC066307|RHEB|6009|Ras homolog enriched in brain##AK289370|RHEB|6009|Ras homolog enriched in brain##AF148645|RHEB|6009|Ras homolog enriched in brain##BT007127|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC020540|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AB025580|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AF087875|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK314646|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK001887|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_024429|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC068598|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_001040633|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK074675|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_016203|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	0.962384	CTCF.p2:17:0.962
chr1	171624756	171624897	reg1018147.p1	8.081	+	AB528547 DQ892415 DQ895629 AF001620 FJ227302 FJ237046 FJ237047 NM_000261 U85257 D88214 BC029261 AK300924 AK300943 AK301297 AK315443 AK097310	-3026	-	AF253978 AL096857 TSC_hg19_v1_chr1_+_171481269 AF488829	-143574	+	TSC_hg19_v1_chr1_+_171454689 BC066968 NM_015172 BC058930 BC026108 BC045713 BC001260 BC006090	-170132	+	BC005974 TSC_hg19_v1_chr1_-_171711206 AL035296 AK290441 AF044310 BC031264 BC007019 NM_001185127 NM_003762	86409	-	AK092254 TSC_hg19_v1_chr1_+_171711293	86461	+	NM_001007239 NM_014955 NM_015935 TSC_hg19_v1_chr1_+_171750799 AK304471 AK223493	125954	+	DQ892415|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##DQ895629|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AF001620|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ227302|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ237046|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ237047|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##NM_000261|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##U85257|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##D88214|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##BC029261|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK300924|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK300943|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK301297|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK315443|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK097310|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AF253978|PRRC2C|23215|proline-rich coiled-coil 2C##AL096857|PRRC2C|23215|proline-rich coiled-coil 2C##AF488829|PRRC2C|23215|proline-rich coiled-coil 2C##BC066968|PRRC2C|23215|proline-rich coiled-coil 2C##NM_015172|PRRC2C|23215|proline-rich coiled-coil 2C##BC058930|PRRC2C|23215|proline-rich coiled-coil 2C##BC026108|PRRC2C|23215|proline-rich coiled-coil 2C##BC045713|PRRC2C|23215|proline-rich coiled-coil 2C##BC001260|PRRC2C|23215|proline-rich coiled-coil 2C##BC006090|PRRC2C|23215|proline-rich coiled-coil 2C##BC005974|VAMP4|8674|vesicle-associated membrane protein 4##AL035296|VAMP4|8674|vesicle-associated membrane protein 4##AK290441|VAMP4|8674|vesicle-associated membrane protein 4##AF044310|VAMP4|8674|vesicle-associated membrane protein 4##BC031264|VAMP4|8674|vesicle-associated membrane protein 4##BC007019|VAMP4|8674|vesicle-associated membrane protein 4##NM_001185127|VAMP4|8674|vesicle-associated membrane protein 4##NM_003762|VAMP4|8674|vesicle-associated membrane protein 4##NM_001007239|METTL13|51603|methyltransferase like 13##NM_014955|METTL13|51603|methyltransferase like 13##NM_015935|METTL13|51603|methyltransferase like 13##AK304471|METTL13|51603|methyltransferase like 13##AK223493|METTL13|51603|methyltransferase like 13	0.851395	CTCF.p2:3:0.851
chr7	39493458	39493599	reg1019543.p1	8.081	+	NM_001166018 NM_007252	-475920	+	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	-544735	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	-822451	-	TSC_hg19_v1_chr7_+_39606002 AK314937 NM_020192 AK293511 AF226046 BC022043 CR457198 DQ892829 DQ896074 DQ896075	112441	+	TSC_hg19_v1_chr7_+_39663159 NM_005402	169638	+	TSC_hg19_v1_chr7_+_39663204 BC039858	169683	+	NM_001166018|POU6F2|11281|POU class 6 homeobox 2##NM_007252|POU6F2|11281|POU class 6 homeobox 2##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##AK314937|YAE1D1|57002|Yae1 domain containing 1##NM_020192|YAE1D1|57002|Yae1 domain containing 1##AF226046|YAE1D1|57002|Yae1 domain containing 1##BC022043|YAE1D1|57002|Yae1 domain containing 1##CR457198|YAE1D1|57002|Yae1 domain containing 1##DQ892829|YAE1D1|57002|Yae1 domain containing 1##DQ896074|YAE1D1|57002|Yae1 domain containing 1##DQ896075|YAE1D1|57002|Yae1 domain containing 1##NM_005402|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)	0.669625	CTCF.p2:10:0.670
chr12	49629063	49629165	reg1016733.p3	8.080	+	TSC_hg19_v1_chr12_-_49582864 BC006468 BC050637 AF141347 AK057842 AK297775 BC057823 NM_006009 AK298838	-46282	-	TSC_hg19_v1_chr12_-_49582309 AK289483	-46730	-	TSC_hg19_v1_chr12_-_49525284 NM_006082	-103827	-	TSC_hg19_v1_chr12_+_49658864 D28390 AK223024 BC005946 NM_032704	29749	+	TSC_hg19_v1_chr12_+_49658867 BC011790 BC004949 BC033064 BC051297 BC019298 BC021088	29770	+	NM_006262 TSC_hg19_v1_chr12_+_49688929 BC032703 AB528454 CU689492 DQ893358 DQ896677	59831	+	BC006468|TUBA1A|7846|tubulin, alpha 1a##BC050637|TUBA1A|7846|tubulin, alpha 1a##AF141347|TUBA1A|7846|tubulin, alpha 1a##AK057842|TUBA1A|7846|tubulin, alpha 1a##AK297775|TUBA1A|7846|tubulin, alpha 1a##BC057823|TUBA1A|7846|tubulin, alpha 1a##NM_006009|TUBA1A|7846|tubulin, alpha 1a##AK298838|TUBA1A|7846|tubulin, alpha 1a##AK289483|TUBA1A|7846|tubulin, alpha 1a##NM_006082|TUBA1B|10376|tubulin, alpha 1b##D28390|TUBA1C|84790|tubulin, alpha 1c##AK223024|TUBA1C|84790|tubulin, alpha 1c##BC005946|TUBA1C|84790|tubulin, alpha 1c##NM_032704|TUBA1C|84790|tubulin, alpha 1c##BC011790|TUBA1C|84790|tubulin, alpha 1c##BC004949|TUBA1C|84790|tubulin, alpha 1c##BC033064|TUBA1C|84790|tubulin, alpha 1c##BC051297|TUBA1C|84790|tubulin, alpha 1c##BC019298|TUBA1C|84790|tubulin, alpha 1c##BC021088|TUBA1C|84790|tubulin, alpha 1c##NM_006262|PRPH|5630|peripherin##BC032703|PRPH|5630|peripherin##DQ893358|PRPH|5630|peripherin##DQ896677|PRPH|5630|peripherin	0.998979	CTCF.p2:12:0.999
chr21	36065663	36065808	reg1018956.p1	8.080	+	AF448438 AF448439 NM_053277	-24048	+	BT007363 CU678256 AF303449 U85266 TSC_hg19_v1_chr21_-_35987486 BC002864 AK092184 AX747397 NM_004414 AY325903	-78389	-	NM_203417 U85265	-78991	-	S76350 GU070939 TSC_hg19_v1_chr21_-_36231874	166101	-	S76345 S76346 GU070941 TSC_hg19_v1_chr21_-_36252995	187201	-	TSC_hg19_v1_chr21_-_36259250 EU093088	193537	-	AF448438|CLIC6|54102|chloride intracellular channel 6##AF448439|CLIC6|54102|chloride intracellular channel 6##NM_053277|CLIC6|54102|chloride intracellular channel 6##BT007363|RCAN1|1827|regulator of calcineurin 1##AF303449|RCAN1|1827|regulator of calcineurin 1##U85266|RCAN1|1827|regulator of calcineurin 1##BC002864|RCAN1|1827|regulator of calcineurin 1##AK092184|RCAN1|1827|regulator of calcineurin 1##NM_004414|RCAN1|1827|regulator of calcineurin 1##AY325903|RCAN1|1827|regulator of calcineurin 1##NM_203417|RCAN1|1827|regulator of calcineurin 1##U85265|RCAN1|1827|regulator of calcineurin 1##S76350|RUNX1|861|runt-related transcription factor 1##S76345|RUNX1|861|runt-related transcription factor 1##S76346|RUNX1|861|runt-related transcription factor 1	0.99991	CTCF.p2:-11:1.000
chr10	70883424	70883583	reg1017248.p2	8.079	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	-35619	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	-35667	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-134968	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	388	+	TSC_hg19_v1_chr10_+_70883933 BX649092 AK315496	430	+	AK297142 TSC_hg19_v1_chr10_+_70883939	437	+	D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_002727|SRGN|5552|serglycin##NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BX649092|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK315496|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK297142|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.0	
chr12	101717569	101717676	reg1016205.p1	8.079	+	TSC_hg19_v1_chr12_+_101673904 NM_014503 AK307934 AJ006778	-43717	+	AK313788 AF536216 AY081220 NM_145913	-113623	-	NM_178826 TSC_hg19_v1_chr12_+_101188522 AK091591 AX747079 AK316105 AK293810	-529068	+	TSC_hg19_v1_chr12_-_101801573 AK311793 AK302911 AK299062 BC007000 BX537387 NM_001177	83921	-	AK296681 NM_002465 NM_206819 NM_206820 NM_206821 AK056587 AK292976 AK295727 AK303401 BC015187 BC030980 BC065720 TSC_hg19_v1_chr12_+_101988748 BC092418 X66276 X73114 AL831993 AL832000 AL832332 AL832350 AL832354 AL832456 BC117217 BC143495 BC143502 BC143503 BC143504 AL834249 BX649073 AB385254 AM392734 EU831907 EU832001	271174	+	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	374000	+	NM_014503|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK307934|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AJ006778|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK313788|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AF536216|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AY081220|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_145913|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_178826|ANO4|121601|anoctamin 4##AK091591|ANO4|121601|anoctamin 4##AK316105|ANO4|121601|anoctamin 4##AK293810|ANO4|121601|anoctamin 4##AK311793|ARL1|400|ADP-ribosylation factor-like 1##AK302911|ARL1|400|ADP-ribosylation factor-like 1##AK299062|ARL1|400|ADP-ribosylation factor-like 1##BC007000|ARL1|400|ADP-ribosylation factor-like 1##BX537387|ARL1|400|ADP-ribosylation factor-like 1##NM_001177|ARL1|400|ADP-ribosylation factor-like 1##AK296681|MYBPC1|4604|myosin binding protein C, slow type##NM_002465|MYBPC1|4604|myosin binding protein C, slow type##NM_206819|MYBPC1|4604|myosin binding protein C, slow type##NM_206820|MYBPC1|4604|myosin binding protein C, slow type##NM_206821|MYBPC1|4604|myosin binding protein C, slow type##AK056587|MYBPC1|4604|myosin binding protein C, slow type##AK292976|MYBPC1|4604|myosin binding protein C, slow type##AK295727|MYBPC1|4604|myosin binding protein C, slow type##AK303401|MYBPC1|4604|myosin binding protein C, slow type##BC015187|MYBPC1|4604|myosin binding protein C, slow type##BC030980|MYBPC1|4604|myosin binding protein C, slow type##BC065720|MYBPC1|4604|myosin binding protein C, slow type##BC092418|MYBPC1|4604|myosin binding protein C, slow type##X66276|MYBPC1|4604|myosin binding protein C, slow type##X73114|MYBPC1|4604|myosin binding protein C, slow type##AL831993|MYBPC1|4604|myosin binding protein C, slow type##AL832000|MYBPC1|4604|myosin binding protein C, slow type##AL832332|MYBPC1|4604|myosin binding protein C, slow type##AL832350|MYBPC1|4604|myosin binding protein C, slow type##AL832354|MYBPC1|4604|myosin binding protein C, slow type##AL832456|MYBPC1|4604|myosin binding protein C, slow type##BC117217|MYBPC1|4604|myosin binding protein C, slow type##BC143495|MYBPC1|4604|myosin binding protein C, slow type##BC143502|MYBPC1|4604|myosin binding protein C, slow type##BC143503|MYBPC1|4604|myosin binding protein C, slow type##BC143504|MYBPC1|4604|myosin binding protein C, slow type##AL834249|MYBPC1|4604|myosin binding protein C, slow type##BX649073|MYBPC1|4604|myosin binding protein C, slow type##AM392734|MYBPC1|4604|myosin binding protein C, slow type##EU831907|MYBPC1|4604|myosin binding protein C, slow type##EU832001|MYBPC1|4604|myosin binding protein C, slow type##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1	0.978381	CTCF.p2:21:0.978
chr3	99562243	99562377	reg1017076.p1	8.079	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	-25565	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	-204860	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-941818	-	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	32681	-	BC017987 NM_001042459 NM_182909 AF329092 AX776292	271042	-	AK300704 NM_001167924	271463	+	AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like##AK300704|C3orf26|84319|chromosome 3 open reading frame 26##NM_001167924|C3orf26|84319|chromosome 3 open reading frame 26	0.979606	CTCF.p2:-30:0.980
chr21	16235241	16235380	reg1016571.p2	8.078	+	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	-316661	-	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-479837	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-646813	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	201907	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	867015	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	867231	+	BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25	0.453469	CTCF.p2:13:0.453
chr21	17198590	17198719	reg1017222.p1	8.078	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	-96113	+	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	-96329	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	-761437	-	TSC_hg19_v1_chr21_+_18885168 NM_001207063 NM_001207064 NM_001207065 NM_001207066 NM_001338	1686509	+	TSC_hg19_v1_chr21_+_18885364 BC003684 AK313526 BC010536 Y07593 DQ891181 DQ894363 AF124598 AY072910 AY072911 AY072912 BT019876 GU474812 U90716	1686717	+	D64110 TSC_hg19_v1_chr21_-_18985177 BC011957	1786486	-	NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor##BC003684|CXADR|1525|coxsackie virus and adenovirus receptor##AK313526|CXADR|1525|coxsackie virus and adenovirus receptor##BC010536|CXADR|1525|coxsackie virus and adenovirus receptor##Y07593|CXADR|1525|coxsackie virus and adenovirus receptor##DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor##DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor##AF124598|CXADR|1525|coxsackie virus and adenovirus receptor##AY072910|CXADR|1525|coxsackie virus and adenovirus receptor##AY072911|CXADR|1525|coxsackie virus and adenovirus receptor##AY072912|CXADR|1525|coxsackie virus and adenovirus receptor##BT019876|CXADR|1525|coxsackie virus and adenovirus receptor##GU474812|CXADR|1525|coxsackie virus and adenovirus receptor##U90716|CXADR|1525|coxsackie virus and adenovirus receptor##D64110|BTG3|10950|BTG family, member 3##BC011957|BTG3|10950|BTG family, member 3	0.041563	
chrX	115014993	115015120	reg1013919.p1	8.078	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-187188	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-218014	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-219450	+	BC003645 TSC_hg19_v1_chrX_-_115085443	70383	-	AK313927 NM_000686 X87723 U16957	286939	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	552711	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428913	CTCF.p2:-14:0.429
chr13	24803116	24803231	reg1015293.p1	8.077	+	TSC_hg19_v1_chr13_+_24734858 AK092754 AX747708 NM_001166271 NM_153023 AK055770	-68278	+	TSC_hg19_v1_chr13_+_24553943 BX648244 BC043582	-249240	+	BX648445 TSC_hg19_v1_chr13_+_24553892	-249308	+	AK299981 AK301149 TSC_hg19_v1_chr13_+_24825840	22662	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	41725	+	BC040438 NM_178540 AY358145	80544	+	AK092754|SPATA13|221178|spermatogenesis associated 13##NM_001166271|SPATA13|221178|spermatogenesis associated 13##NM_153023|SPATA13|221178|spermatogenesis associated 13##AK055770|SPATA13|221178|spermatogenesis associated 13##BX648244|SPATA13|221178|spermatogenesis associated 13##AK299981|SPATA13|221178|spermatogenesis associated 13##AK301149|SPATA13|221178|spermatogenesis associated 13##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9	0.998017	CTCF.p2:-14:0.998
chr4	159181252	159181392	reg1020109.p1	8.077	+	BC036551 BC048117 BC054487 TSC_hg19_v1_chr4_+_159131677 BC060875 BC035811 BC026318	-49648	+	NM_018342	-49922	+	AY358785 AK172805 BC043193 NM_001031700 NM_001128424	-87140	-	NM_001253727 NM_001253728 NM_001253729 NM_001253730 NM_001253732 NM_001253733 NM_021634 BX647985 BX647975 BX647980 AK307889 AK300379 AK312470 TSC_hg19_v1_chr4_+_159443033 AK295040 BC113617 BC143557 BC143558 BC143559 BC112142 BC143556 AK294694 AB208943 AF190500 AY899848 AY899849 AY899850 HQ258496	261674	+	TSC_hg19_v1_chr4_-_159593035 AK027539 BC065017 BC094775 NM_001008393	411768	-	TSC_hg19_v1_chr4_+_159593447 AK314803 NM_004453 BC011890 AK311435 BX538129 AK304838 S69232 EU093082 EU093083	412072	+	BC036551|TMEM144|55314|transmembrane protein 144##BC048117|TMEM144|55314|transmembrane protein 144##BC054487|TMEM144|55314|transmembrane protein 144##BC060875|TMEM144|55314|transmembrane protein 144##BC035811|TMEM144|55314|transmembrane protein 144##BC026318|TMEM144|55314|transmembrane protein 144##NM_018342|TMEM144|55314|transmembrane protein 144##AY358785|FAM198B|51313|family with sequence similarity 198, member B##AK172805|FAM198B|51313|family with sequence similarity 198, member B##BC043193|FAM198B|51313|family with sequence similarity 198, member B##NM_001031700|FAM198B|51313|family with sequence similarity 198, member B##NM_001128424|FAM198B|51313|family with sequence similarity 198, member B##NM_001253727|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253728|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253729|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253730|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253732|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253733|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_021634|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647985|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647975|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647980|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK307889|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK300379|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK312470|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK295040|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC113617|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143557|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143558|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143559|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC112142|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143556|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK294694|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AB208943|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AF190500|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899848|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899849|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899850|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##HQ258496|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK027539|C4orf46|201725|chromosome 4 open reading frame 46##BC065017|C4orf46|201725|chromosome 4 open reading frame 46##BC094775|C4orf46|201725|chromosome 4 open reading frame 46##NM_001008393|C4orf46|201725|chromosome 4 open reading frame 46##AK314803|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##NM_004453|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BC011890|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BX538129|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##AK304838|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##S69232|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093082|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093083|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase	0.99922	CTCF.p2:-7:0.999
chr6	118162005	118162154	reg1016060.p1	8.077	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-165413	+	BC110325 TSC_hg19_v1_chr6_+_117996661 BC063794	-165418	+	TSC_hg19_v1_chr6_+_117996651 BC150654 BC150655 AK125119	-165432	+	BC028615 NM_001029858 BC114925	66611	+	NM_002667 M63603 AK311799 BC005269	707386	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	810957	-	AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC110325|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC063794|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150654|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150655|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##AK125119|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like	0.923983	CTCF.p2:-21:0.924
chr11	20418926	20419022	reg1016142.p1	8.076	+	BC047226 TSC_hg19_v1_chr11_+_20409261 AK301449 AK298185 AK300591 BC037544 AB590779 EU831425 EU831518	-9714	+	NM_001145166 NM_001145167 NM_005788 TSC_hg19_v1_chr11_+_20409136 BC064831 BC019339 AK129984	-9858	+	AF092095 NM_001098523 U69161 AK223010 BC015358 AK222969 AF039103 EU446982 AB463744 CR456821	-33240	+	NM_004211 AF085412	201973	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	272218	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	1795673	+	BC047226|PRMT3|10196|protein arginine methyltransferase 3##AK301449|PRMT3|10196|protein arginine methyltransferase 3##AK298185|PRMT3|10196|protein arginine methyltransferase 3##AK300591|PRMT3|10196|protein arginine methyltransferase 3##BC037544|PRMT3|10196|protein arginine methyltransferase 3##EU831425|PRMT3|10196|protein arginine methyltransferase 3##EU831518|PRMT3|10196|protein arginine methyltransferase 3##NM_001145166|PRMT3|10196|protein arginine methyltransferase 3##NM_001145167|PRMT3|10196|protein arginine methyltransferase 3##NM_005788|PRMT3|10196|protein arginine methyltransferase 3##BC064831|PRMT3|10196|protein arginine methyltransferase 3##BC019339|PRMT3|10196|protein arginine methyltransferase 3##AK129984|PRMT3|10196|protein arginine methyltransferase 3##AF092095|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098523|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##U69161|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AK223010|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##BC015358|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AK222969|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AF039103|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##EU446982|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##CR456821|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5	0.558753	CTCF.p2:-1:0.559
chr12	72030529	72030646	reg1018267.p1	8.076	+	TSC_hg19_v1_chr12_+_71833761 AK075399 AF062006 FN820440 NM_003667 BC096324 BC096325 BC096326 BC099650 AF061444	-196777	+	TSC_hg19_v1_chr12_+_71833577 AK294985 AK315133	-197037	+	BC005246 NM_004616	-478809	-	AB385347 CU677389 TSC_hg19_v1_chr12_-_72057432	26823	-	TSC_hg19_v1_chr12_-_72057617 AB011118 BC073843 BC064336 BX647709 BC015679	27011	-	TSC_hg19_v1_chr12_-_72057679 NM_144982	27125	-	AK075399|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AF062006|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##FN820440|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##NM_003667|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096324|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096325|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096326|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC099650|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AF061444|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AK294985|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AK315133|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC005246|TSPAN8|7103|tetraspanin 8##NM_004616|TSPAN8|7103|tetraspanin 8##AB011118|ZFC3H1|196441|zinc finger, C3H1-type containing##BC073843|ZFC3H1|196441|zinc finger, C3H1-type containing##BC064336|ZFC3H1|196441|zinc finger, C3H1-type containing##BX647709|ZFC3H1|196441|zinc finger, C3H1-type containing##BC015679|ZFC3H1|196441|zinc finger, C3H1-type containing##NM_144982|ZFC3H1|196441|zinc finger, C3H1-type containing	0.573055	CTCF.p2:18:0.573
chr14	90439709	90439818	reg1017147.p1	8.076	+	TSC_hg19_v1_chr14_+_90422278 AK001952 BC015474 AK315549 BX161451	-17484	+	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	-17517	+	BC001787 BX247991 AK298930 AK094740 NM_145231	-18703	-	NM_022054 BC012779	88344	+	L02426 NM_002802 TSC_hg19_v1_chr14_+_90722920 AK313325 BC000512 BC016368 AK299121 BC067741 AK222668	283146	+	BC008925 BC033136 BC098568 TSC_hg19_v1_chr14_-_90798286 AK000870 AK294958 BC021805 NM_017970	358603	-	AK001952|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC015474|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK315549|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BX161451|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##NM_022054|KCNK13|56659|potassium channel, subfamily K, member 13##BC012779|KCNK13|56659|potassium channel, subfamily K, member 13##L02426|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##NM_002802|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##AK313325|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC000512|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC016368|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##AK299121|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC067741|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##AK222668|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC008925|C14orf102|55051|chromosome 14 open reading frame 102##BC033136|C14orf102|55051|chromosome 14 open reading frame 102##BC098568|C14orf102|55051|chromosome 14 open reading frame 102##AK000870|C14orf102|55051|chromosome 14 open reading frame 102##AK294958|C14orf102|55051|chromosome 14 open reading frame 102##BC021805|C14orf102|55051|chromosome 14 open reading frame 102##NM_017970|C14orf102|55051|chromosome 14 open reading frame 102	0.994804	CTCF.p2:2:0.995
chr2	213432430	213432563	reg1017738.p1	8.076	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	-29181	-	AK316425 NM_001122634 AK302778 AY317138	-1974411	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-2011107	+	AK301503 AF130863 NM_016260	582559	-	BC028936 NM_001079526	583836	-	AK124960 NM_001242575	716432	-	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451	0.999667	CTCF.p2:34:1.000
chr6	161839568	161839695	reg1016938.p1	8.076	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	-144571	-	AK094629 TSC_hg19_v1_chr6_-_161413451	-426218	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-426773	+	AK057286 NM_001080378 NM_152410 BC044227	1308538	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	1309096	-	TSC_hg19_v1_chr6_-_163148797 AB245403 AK292590 BC022014	1309147	-	AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB245403|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AK292590|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##BC022014|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.961107	CTCF.p2:-19:0.961
chr6	52747266	52747367	reg1016594.p1	8.076	+	NM_153699	-36424	-	BC053578 BC110891 M15872 TSC_hg19_v1_chr6_-_52668615 AK293371 M14777 M21758 M25627 NM_145740 AK310324	-78635	-	AK292602 AK313601 M16594 BC002895 NM_000846	-119000	-	AF020919 BC020619 NM_000847	27161	-	AK315369 TSC_hg19_v1_chr6_-_52860078 AF020918 AF025887 BC096817 NM_001512	112811	-	AB023153 BC152464 TSC_hg19_v1_chr6_-_52926579 AF152469 AK074892	179216	-	NM_153699|GSTA5|221357|glutathione S-transferase alpha 5##BC053578|GSTA1|2938|glutathione S-transferase alpha 1##BC110891|GSTA1|2938|glutathione S-transferase alpha 1##M15872|GSTA1|2938|glutathione S-transferase alpha 1##AK293371|GSTA1|2938|glutathione S-transferase alpha 1##M14777|GSTA1|2938|glutathione S-transferase alpha 1##M21758|GSTA1|2938|glutathione S-transferase alpha 1##M25627|GSTA1|2938|glutathione S-transferase alpha 1##NM_145740|GSTA1|2938|glutathione S-transferase alpha 1##AK310324|GSTA1|2938|glutathione S-transferase alpha 1##AK292602|GSTA2|2939|glutathione S-transferase alpha 2##AK313601|GSTA2|2939|glutathione S-transferase alpha 2##M16594|GSTA2|2939|glutathione S-transferase alpha 2##BC002895|GSTA2|2939|glutathione S-transferase alpha 2##NM_000846|GSTA2|2939|glutathione S-transferase alpha 2##AF020919|GSTA3|2940|glutathione S-transferase alpha 3##BC020619|GSTA3|2940|glutathione S-transferase alpha 3##NM_000847|GSTA3|2940|glutathione S-transferase alpha 3##AK315369|GSTA4|2941|glutathione S-transferase alpha 4##AF020918|GSTA4|2941|glutathione S-transferase alpha 4##AF025887|GSTA4|2941|glutathione S-transferase alpha 4##BC096817|GSTA4|2941|glutathione S-transferase alpha 4##NM_001512|GSTA4|2941|glutathione S-transferase alpha 4##AB023153|ICK|22858|intestinal cell (MAK-like) kinase##BC152464|ICK|22858|intestinal cell (MAK-like) kinase##AF152469|ICK|22858|intestinal cell (MAK-like) kinase##AK074892|ICK|22858|intestinal cell (MAK-like) kinase	0.981327	CTCF.p2:2:0.981
chr12	67809388	67809512	reg1017697.p2	8.075	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-146020	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-146278	+	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	-146348	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	233173	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	743972	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	810102	-	BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26	0.0	
chr22	24817502	24817645	reg1013336.p1	8.074	+	TSC_hg19_v1_chr22_+_24666804 NM_001145468 NM_015330 AK097129 AK301482 AB209022 AL832425 BC005093 BC136471	-150733	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	-176594	-	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	-240129	+	TSC_hg19_v1_chr22_+_24819870 EU036694	2307	+	NM_000675 AK123058 EU036693 AK301420 BC013780	5992	+	AK314727 CR627429 CR456375 NM_016327 BC131703 TSC_hg19_v1_chr22_+_24891299 AF163312 AB013885 BC033388 AB528843 BC139840 BC139843 CU013080 CU013368	73668	+	NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##EU036694|ADORA2A|135|adenosine A2a receptor##NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor##AK314727|UPB1|51733|ureidopropionase, beta##CR627429|UPB1|51733|ureidopropionase, beta##CR456375|UPB1|51733|ureidopropionase, beta##NM_016327|UPB1|51733|ureidopropionase, beta##BC131703|UPB1|51733|ureidopropionase, beta##AF163312|UPB1|51733|ureidopropionase, beta##AB013885|UPB1|51733|ureidopropionase, beta##BC033388|UPB1|51733|ureidopropionase, beta##BC139840|UPB1|51733|ureidopropionase, beta##BC139843|UPB1|51733|ureidopropionase, beta##CU013080|UPB1|51733|ureidopropionase, beta##CU013368|UPB1|51733|ureidopropionase, beta	1.035597	CTCF.p2:-53:0.837
chr15	21183545	21183643	reg1016965.p1	8.073	+	NM_207355 BC066981	-111616	-	NM_001145004	-436481	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-472157	-	NM_207355 BC066981	899544	-	BC136985 NM_001004719	1184883	+	BC136597 BC136598 NM_001005241 DQ786223	1198851	+	NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4	0.997092	CTCF.p2:9:0.997
chr19	52164382	52164488	reg1015717.p1	8.072	+	AY358369 AY854038 AK298284 NM_001098612	-14366	-	DQ892433 AF170484 BC029896 AK225753 U71383 NM_003830	-30778	-	NM_007147 BC007778 AK292687 BC052997 D50419	-89888	+	NM_001523 U59269 BC035837 AM904814	62797	-	M60626 S49810 M60627 BC005315 NM_001193306 NM_002029 AK314935	90695	-	NM_001005738 M88107 D10922 AK290557	100023	+	AY854038|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##AK298284|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##NM_001098612|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##DQ892433|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AF170484|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##BC029896|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AK225753|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##U71383|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_003830|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_007147|ZNF175|7728|zinc finger protein 175##BC007778|ZNF175|7728|zinc finger protein 175##AK292687|ZNF175|7728|zinc finger protein 175##BC052997|ZNF175|7728|zinc finger protein 175##D50419|ZNF175|7728|zinc finger protein 175##NM_001523|HAS1|3036|hyaluronan synthase 1##U59269|HAS1|3036|hyaluronan synthase 1##BC035837|HAS1|3036|hyaluronan synthase 1##AM904814|HAS1|3036|hyaluronan synthase 1##M60626|FPR1|2357|formyl peptide receptor 1##S49810|FPR1|2357|formyl peptide receptor 1##M60627|FPR1|2357|formyl peptide receptor 1##BC005315|FPR1|2357|formyl peptide receptor 1##NM_001193306|FPR1|2357|formyl peptide receptor 1##NM_002029|FPR1|2357|formyl peptide receptor 1##AK314935|FPR1|2357|formyl peptide receptor 1##NM_001005738|FPR2|2358|formyl peptide receptor 2##M88107|FPR2|2358|formyl peptide receptor 2##D10922|FPR2|2358|formyl peptide receptor 2##AK290557|FPR2|2358|formyl peptide receptor 2	0.999556	CTCF.p2:-7:1.000
chr2	191646488	191646627	reg1019259.p1	8.072	+	TSC_hg19_v1_chr2_+_191513840 NM_005966 BC035724 AK292446	-132591	+	TSC_hg19_v1_chr2_-_191399454 NM_001142645	-247091	-	AK296987 TSC_hg19_v1_chr2_-_191399436	-247130	-	AK289747 NM_014905 TSC_hg19_v1_chr2_+_191745546	98989	+	TSC_hg19_v1_chr2_+_191745547 BC038507 AB020645 AF158555	99000	+	TSC_hg19_v1_chr2_+_191745568 AF097495 Y08264 AF327434	99027	+	NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##NM_001142645|TMEM194B|100131211|transmembrane protein 194B##AK296987|TMEM194B|100131211|transmembrane protein 194B##AK289747|GLS|2744|glutaminase##NM_014905|GLS|2744|glutaminase##BC038507|GLS|2744|glutaminase##AB020645|GLS|2744|glutaminase##AF158555|GLS|2744|glutaminase##AF097495|GLS|2744|glutaminase##Y08264|GLS|2744|glutaminase##AF327434|GLS|2744|glutaminase	0.964853	CTCF.p2:-19:0.965
chr7	37007065	37007165	reg1014130.p1	8.072	+	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-243039	-	BC028678 NM_001100425	-577401	-	TSC_hg19_v1_chr7_+_36429470 BC070066 NM_018685 AK299803 AK291254 AF273437	-577675	+	BC064635 NM_001039459	17575	-	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	18605	-	AK291784 NM_001206482	386156	-	M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC028678|KIAA0895|23366|KIAA0895##NM_001100425|KIAA0895|23366|KIAA0895##BC070066|ANLN|54443|anillin, actin binding protein##NM_018685|ANLN|54443|anillin, actin binding protein##AK299803|ANLN|54443|anillin, actin binding protein##AK291254|ANLN|54443|anillin, actin binding protein##AF273437|ANLN|54443|anillin, actin binding protein##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1	0.149446	
chr11	72889042	72889223	reg1000308.p1	8.071	+	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	-36083	-	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-363650	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-363727	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	40212	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	40314	+	AK313942 TSC_hg19_v1_chr11_+_72929608	40484	+	AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.0	
chr20	62413513	62413630	reg1017135.p1	8.071	+	TSC_hg19_v1_chr20_+_62372460 AK298304 BC017446	-41051	+	TSC_hg19_v1_chr20_+_62371761 AB044786 BC001402	-41818	+	TSC_hg19_v1_chr20_+_62371629 AB044777	-41933	+	AK131482 NM_025224	23284	-	TSC_hg19_v1_chr20_-_62462618 BC052269 BC073800	49026	-	NM_080622	78994	+	AK298304|SLC2A4RG|56731|SLC2A4 regulator##BC017446|SLC2A4RG|56731|SLC2A4 regulator##AB044786|SLC2A4RG|56731|SLC2A4 regulator##BC001402|SLC2A4RG|56731|SLC2A4 regulator##AB044777|SLC2A4RG|56731|SLC2A4 regulator##AK131482|ZBTB46|140685|zinc finger and BTB domain containing 46##NM_025224|ZBTB46|140685|zinc finger and BTB domain containing 46##BC052269|ZBTB46|140685|zinc finger and BTB domain containing 46##BC073800|ZBTB46|140685|zinc finger and BTB domain containing 46##NM_080622|ABHD16B|140701|abhydrolase domain containing 16B	0.987537	CTCF.p2:3:0.988
chr7	137277135	137277261	reg1016954.p1	8.071	+	BC005916 TSC_hg19_v1_chr7_-_137028543 NM_002825 M57399	-248643	-	X52946 TSC_hg19_v1_chr7_-_137028443 AK313424	-248757	-	TSC_hg19_v1_chr7_-_137028371 AK290488	-248825	-	TSC_hg19_v1_chr7_-_137531587 NM_004717	254398	-	TSC_hg19_v1_chr7_+_137531690 BC047556	254534	+	TSC_hg19_v1_chr7_-_137620668 BC015585	343464	-	BC005916|PTN|5764|pleiotrophin##NM_002825|PTN|5764|pleiotrophin##M57399|PTN|5764|pleiotrophin##X52946|PTN|5764|pleiotrophin##AK313424|PTN|5764|pleiotrophin##AK290488|PTN|5764|pleiotrophin##NM_004717|DGKI|9162|diacylglycerol kinase, iota##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.643809	CTCF.p2:12:0.644
chr8	73123168	73123278	reg1018058.p2	8.071	+	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	-135389	-	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-366515	-	AF060154 TSC_hg19_v1_chr8_-_72756646	-366595	-	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	326420	+	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	797889	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	882219	-	NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##AF060154|MSC|9242|musculin##AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84	0.227159	CTCF.p2:6:0.227
chr9	93747615	93747744	reg1019649.p1	8.071	+	NM_001174167 X73568	-157946	+	TSC_hg19_v1_chr9_+_93564206 NM_001174168 BC011399	-183464	+	TSC_hg19_v1_chr9_+_93564100 AK290927	-183564	+	TSC_hg19_v1_chr9_-_94124185 AB528075 AM393420 CU676666 DQ892036 DQ895227 X79888 AK302453	376491	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	376520	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	438365	-	NM_001174167|SYK|6850|spleen tyrosine kinase##X73568|SYK|6850|spleen tyrosine kinase##NM_001174168|SYK|6850|spleen tyrosine kinase##BC011399|SYK|6850|spleen tyrosine kinase##AK290927|SYK|6850|spleen tyrosine kinase##AM393420|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ892036|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ895227|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##X79888|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK302453|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated	0.067264	
chr10	101195911	101196038	reg1017170.p1	8.070	+	AK301916 AB587385 AY513279 M37400 AF052153 BC000498 AK312684 TSC_hg19_v1_chr10_-_101190382 AK293483 AK309174 NM_002079	-5608	-	TSC_hg19_v1_chr10_+_101089114 AK308618	-106848	+	TSC_hg19_v1_chr10_+_101088794 NM_020348	-107150	+	NM_145285 BC025788 AK313485 AK300856	96739	+	TSC_hg19_v1_chr10_-_101380086 AF327403 AJ303078 AF327402 AJ303077 BC058937	184133	-	BC076399 TSC_hg19_v1_chr10_-_101380197 BC047312	184206	-	AK301916|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AY513279|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##M37400|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AF052153|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##BC000498|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK312684|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK293483|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK309174|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##NM_002079|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK308618|CNNM1|26507|cyclin M1##NM_020348|CNNM1|26507|cyclin M1##NM_145285|NKX2-3|159296|NK2 homeobox 3##BC025788|NKX2-3|159296|NK2 homeobox 3##AK313485|NKX2-3|159296|NK2 homeobox 3##AK300856|NKX2-3|159296|NK2 homeobox 3##AF327403|SLC25A28|81894|solute carrier family 25, member 28##AJ303078|SLC25A28|81894|solute carrier family 25, member 28##AF327402|SLC25A28|81894|solute carrier family 25, member 28##AJ303077|SLC25A28|81894|solute carrier family 25, member 28##BC058937|SLC25A28|81894|solute carrier family 25, member 28##BC076399|SLC25A28|81894|solute carrier family 25, member 28##BC047312|SLC25A28|81894|solute carrier family 25, member 28	0.955406	CTCF.p2:-24:0.955
chr11	26318861	26318969	reg1017618.p1	8.070	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-1800266	+	NM_001195637	-3436944	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-3467570	-	NM_031418 AK302659	34815	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	274825	-	BC049207 NM_178498	424644	-	AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	0.0	
chr22	45837185	45837287	reg1017594.p2	8.070	+	TSC_hg19_v1_chr22_+_45809599 BC003024 BC009904 AL442116	-27608	+	TSC_hg19_v1_chr22_+_45809579 AK098586 NM_015653 AK225722	-27667	+	TSC_hg19_v1_chr22_-_45809502 BC126208 AJ504806 NM_148674	-27752	-	TSC_hg19_v1_chr22_+_45898762 NM_001996 NM_006485 NM_006486 NM_006487 AK075566 AK075460 AK300806 AK316291 BC022497 AF217999 AF126110 U01244 X53741 X53742 X53743 AB528743 DQ894047	61540	+	NM_001167621 NM_013236 AK294348 TSC_hg19_v1_chr22_+_46067713	230459	+	TSC_hg19_v1_chr22_+_46067733 AF086923 AL050282	230493	+	BC003024|RIBC2|26150|RIB43A domain with coiled-coils 2##BC009904|RIBC2|26150|RIB43A domain with coiled-coils 2##AL442116|RIBC2|26150|RIB43A domain with coiled-coils 2##AK098586|RIBC2|26150|RIB43A domain with coiled-coils 2##NM_015653|RIBC2|26150|RIB43A domain with coiled-coils 2##AK225722|RIBC2|26150|RIB43A domain with coiled-coils 2##BC126208|SMC1B|27127|structural maintenance of chromosomes 1B##AJ504806|SMC1B|27127|structural maintenance of chromosomes 1B##NM_148674|SMC1B|27127|structural maintenance of chromosomes 1B##NM_001996|FBLN1|2192|fibulin 1##NM_006485|FBLN1|2192|fibulin 1##NM_006486|FBLN1|2192|fibulin 1##NM_006487|FBLN1|2192|fibulin 1##AK075566|FBLN1|2192|fibulin 1##AK075460|FBLN1|2192|fibulin 1##AK300806|FBLN1|2192|fibulin 1##AK316291|FBLN1|2192|fibulin 1##BC022497|FBLN1|2192|fibulin 1##AF217999|FBLN1|2192|fibulin 1##AF126110|FBLN1|2192|fibulin 1##U01244|FBLN1|2192|fibulin 1##X53741|FBLN1|2192|fibulin 1##X53742|FBLN1|2192|fibulin 1##X53743|FBLN1|2192|fibulin 1##DQ894047|FBLN1|2192|fibulin 1##NM_001167621|ATXN10|25814|ataxin 10##NM_013236|ATXN10|25814|ataxin 10##AK294348|ATXN10|25814|ataxin 10##AF086923|ATXN10|25814|ataxin 10##AL050282|ATXN10|25814|ataxin 10	0.968169	CTCF.p2:0:0.968
chr16	71916423	71916555	reg1017392.p1	8.069	+	TSC_hg19_v1_chr16_+_71879908 NM_001137675	-36568	+	TSC_hg19_v1_chr16_+_71879878 AB621810	-36614	+	TSC_hg19_v1_chr16_-_71842963 BC036283 AK128078 NM_001030007 NM_001128 AK314484	-73511	-	AF070588 AK296603 NM_001201553 NM_017530	938	-	TSC_hg19_v1_chr16_-_71918084 BC012116 AK313693 BC004563 NM_001201552 NM_001201554 NM_001201556	1555	-	TSC_hg19_v1_chr16_+_71929421 AK291388 AK297336 BC103745	12925	+	NM_001137675|ATXN1L|342371|ataxin 1-like##BC036283|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK128078|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##NM_001030007|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##NM_001128|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK314484|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AF070588|ZNF821|55565|zinc finger protein 821##AK296603|ZNF821|55565|zinc finger protein 821##NM_001201553|ZNF821|55565|zinc finger protein 821##NM_017530|ZNF821|55565|zinc finger protein 821##BC012116|ZNF821|55565|zinc finger protein 821##AK313693|ZNF821|55565|zinc finger protein 821##BC004563|ZNF821|55565|zinc finger protein 821##NM_001201552|ZNF821|55565|zinc finger protein 821##NM_001201554|ZNF821|55565|zinc finger protein 821##NM_001201556|ZNF821|55565|zinc finger protein 821##AK291388|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK297336|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC103745|IST1|9798|increased sodium tolerance 1 homolog (yeast)	0.0	
chr3	196246102	196246254	reg1017289.p1	8.069	+	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	-3965	-	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	-15600	-	TSC_hg19_v1_chr3_-_196159304 NM_015562	-86845	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	49212	-	AK025697 TSC_hg19_v1_chr3_+_196295533	49329	+	TSC_hg19_v1_chr3_+_196295733 NM_001105573	49554	+	AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##NM_015562|UBXN7|26043|UBX domain protein 7##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53##AK025697|FBXO45|200933|F-box protein 45##NM_001105573|FBXO45|200933|F-box protein 45	0.988933	CTCF.p2:37:0.989
chr4	52762102	52762209	reg1017039.p1	8.069	+	AK124346 NM_001040402 NM_015115 TSC_hg19_v1_chr4_+_52709318 BC053897 AK294896 BX537944 AK027051 D87466 BC041702 AM392554 AM392637 AM392729 AM393240	-52869	+	AK025164 NM_025087 BC137387 BC137388	-3773883	+	TSC_hg19_v1_chr4_-_48908795 CR749310 BC032808 AK298305 NM_001014446 NM_152398	-3853376	-	CR749811 NM_001024611	121630	-	BT019433 CR456810 DQ893140 DQ896425 EU176433 U29586 TSC_hg19_v1_chr4_-_52904447 AK299765 BC020709 AK289892 U31116 NM_000232	142302	-	TSC_hg19_v1_chr4_+_52917480 AK304386 AK057468 BC025396 NM_145263 AK314799	155378	+	AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK025164|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##NM_025087|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137387|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137388|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##CR749310|OCIAD2|132299|OCIA domain containing 2##BC032808|OCIAD2|132299|OCIA domain containing 2##AK298305|OCIAD2|132299|OCIA domain containing 2##NM_001014446|OCIAD2|132299|OCIA domain containing 2##NM_152398|OCIAD2|132299|OCIA domain containing 2##CR749811|LRRC66|339977|leucine rich repeat containing 66##NM_001024611|LRRC66|339977|leucine rich repeat containing 66##BT019433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR456810|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ893140|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ896425|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##EU176433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U29586|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK299765|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##BC020709|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK289892|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U31116|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##NM_000232|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK304386|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK057468|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BC025396|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##NM_145263|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK314799|SPATA18|132671|spermatogenesis associated 18 homolog (rat)	0.99873	CTCF.p2:3:0.999
chr8	72756136	72756266	reg1016505.p1	8.069	+	BC035138 BC048982 TSC_hg19_v1_chr8_-_72459928	-296292	-	AJ000098 NM_000503 TSC_hg19_v1_chr8_-_72274481	-481726	-	TSC_hg19_v1_chr8_-_72274302 AK307379	-481908	-	TSC_hg19_v1_chr8_+_72756330 AK123315 BC094782	73	+	TSC_hg19_v1_chr8_+_72756336 BX647470	139	+	TSC_hg19_v1_chr8_-_72756449 AF087036 AB463900 BT007169	238	-	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK123315|LOC100132891|100132891|uncharacterized LOC100132891##AF087036|MSC|9242|musculin##BT007169|MSC|9242|musculin	0.0	
chr1	154297182	154297317	reg1018697.p1	8.068	+	AK314993 AB066105 BC069607 NM_080429 BC074896 BC074897 AF159174 CU686930	-3650	+	TSC_hg19_v1_chr1_+_154245134 BC015209 AB463719 CU677241 CU677697	-52084	+	AK300676 TSC_hg19_v1_chr1_+_154245084 AK313291 BC016730 EU190982 AK294298 AK290626 AK310000 BC014314 AK311450 EU190983	-52144	+	TSC_hg19_v1_chr1_+_154298029 BC069264	779	+	TSC_hg19_v1_chr1_+_154298034 NM_001005855 X58235	814	+	AY302537 NM_020452	3026	+	AK314993|AQP10|89872|aquaporin 10##AB066105|AQP10|89872|aquaporin 10##BC069607|AQP10|89872|aquaporin 10##NM_080429|AQP10|89872|aquaporin 10##BC074896|AQP10|89872|aquaporin 10##BC074897|AQP10|89872|aquaporin 10##AF159174|AQP10|89872|aquaporin 10##BC015209|HAX1|10456|HCLS1 associated protein X-1##AK300676|HAX1|10456|HCLS1 associated protein X-1##AK313291|HAX1|10456|HCLS1 associated protein X-1##BC016730|HAX1|10456|HCLS1 associated protein X-1##EU190982|HAX1|10456|HCLS1 associated protein X-1##AK294298|HAX1|10456|HCLS1 associated protein X-1##AK290626|HAX1|10456|HCLS1 associated protein X-1##AK310000|HAX1|10456|HCLS1 associated protein X-1##BC014314|HAX1|10456|HCLS1 associated protein X-1##AK311450|HAX1|10456|HCLS1 associated protein X-1##EU190983|HAX1|10456|HCLS1 associated protein X-1##BC069264|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_001005855|ATP8B2|57198|ATPase, class I, type 8B, member 2##AY302537|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_020452|ATP8B2|57198|ATPase, class I, type 8B, member 2	0.509151	CTCF.p2:-14:0.494
chr11	78787720	78787827	reg1017455.p1	8.068	+	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-501878	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-501981	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	-658897	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	363951	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	3657125	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	3823744	-	AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_080491|GAB2|9846|GRB2-associated binding protein 2##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)	0.982631	CTCF.p2:-3:0.983
chr1	20757033	20757144	reg1016250.p1	8.068	+	NM_001039500 AK125833	-139668	+	BC047428 NM_152376 BX648631 AK058158 TSC_hg19_v1_chr1_+_20512591	-244504	+	NM_001105572	-255402	-	AY204901 TSC_hg19_v1_chr1_-_20812323	55210	-	NM_018584 TSC_hg19_v1_chr1_-_20812743	55693	-	EU935008 AB528298 AM393331 AM393690 TSC_hg19_v1_chr1_-_20834605 BC014010 BC010101	77472	-	NM_001039500|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AK125833|VWA5B1|127731|von Willebrand factor A domain containing 5B1##BC047428|UBXN10|127733|UBX domain protein 10##NM_152376|UBXN10|127733|UBX domain protein 10##BX648631|UBXN10|127733|UBX domain protein 10##AK058158|UBXN10|127733|UBX domain protein 10##NM_001105572|PLA2G2C|391013|phospholipase A2, group IIC##AY204901|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##NM_018584|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##EU935008|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AM393331|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AM393690|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC014010|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC010101|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1	0.998862	CTCF.p2:7:0.999
chr1	180137941	180138071	reg1017564.p2	8.067	+	TSC_hg19_v1_chr1_+_180124047 AB384905	-13950	+	AF361868 TSC_hg19_v1_chr1_+_180124032 L42379	-13974	+	AB209280 BC100023 TSC_hg19_v1_chr1_+_180124023 BC017692	-13980	+	NM_033343 AF179849	61430	+	TSC_hg19_v1_chr1_-_180471976 AK314112 NM_032360	333958	-	TSC_hg19_v1_chr1_+_180601151 BC028576 NM_001135669 NM_004736	463131	+	AF361868|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##L42379|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##AB209280|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##BC100023|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##BC017692|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##NM_033343|LHX4|89884|LIM homeobox 4##AF179849|LHX4|89884|LIM homeobox 4##AK314112|ACBD6|84320|acyl-CoA binding domain containing 6##NM_032360|ACBD6|84320|acyl-CoA binding domain containing 6##BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	0.947536	CTCF.p2:8:0.948
chrX	130863464	130863623	reg1017330.p3	8.067	+	BC137050 AB529233 NM_001004486	-185545	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-440131	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-440281	-	TSC_hg19_v1_chrX_-_130964633 AK097911	101108	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	293778	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	294097	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.0	
chr12	18583509	18583617	reg1016871.p1	8.066	+	NM_004570	-169090	+	AK026308 BC042888 NM_024730	-340481	-	AF258348 BC017777 AB044746 AK095595 AK308826 NM_001001395 NM_001243609	-1822522	-	AF532185 NM_033123 AK314516 AY035866 AK292279	307390	-	BC016745 NM_033328 AB053259 AK058174 CU677705	307557	+	TSC_hg19_v1_chr12_+_19282701 NM_001143821 NM_001190860 NM_019012 BC070174 BC044245 AK297391 AK295151 AK026344 AF302150 BC127091 BC127092 AB051473	699002	+	NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide##AK026308|RERGL|79785|RERG/RAS-like##BC042888|RERGL|79785|RERG/RAS-like##NM_024730|RERGL|79785|RERG/RAS-like##AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1##BC016745|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##NM_033328|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AB053259|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AK058174|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##NM_001143821|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##NM_001190860|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##NM_019012|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC070174|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC044245|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AK297391|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AK295151|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AK026344|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AF302150|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC127091|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC127092|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AB051473|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	0.0	
chr15	79032923	79033038	reg1016458.p2	8.066	+	TSC_hg19_v1_chr15_-_78933573 U62439 Y08416 BC096080 BC096081 BC096082 BC096083 NM_000750 U48861	-99407	-	TSC_hg19_v1_chr15_-_78913532 BC098443 BC006114 NM_000743 NM_001166694	-119408	-	AF385584 Y08418 BT006646 BT006897 CU674246 CU675253 M86383 M37981 TSC_hg19_v1_chr15_-_78913298 BC000513 BC001642 BC002996 U62432	-119747	-	TSC_hg19_v1_chr15_+_79102818 AK095823	69847	+	AY327122 AF140675 TSC_hg19_v1_chr15_-_79103698 BC061631 NM_014272 AK299844	70770	-	TSC_hg19_v1_chr15_+_79165157 NM_006791 NM_206839	132194	+	U62439|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##Y08416|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096080|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096081|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096082|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096083|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##NM_000750|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##U48861|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC098443|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC006114|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_000743|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_001166694|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AF385584|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##Y08418|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006646|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006897|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##M37981|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC000513|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC001642|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC002996|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##U62432|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AK095823|MORF4L1|10933|mortality factor 4 like 1##AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_006791|MORF4L1|10933|mortality factor 4 like 1##NM_206839|MORF4L1|10933|mortality factor 4 like 1	0.019581	
chr3	111732515	111732614	reg1015416.p1	8.066	+	NM_001008273 BC004477 TSC_hg19_v1_chr3_+_111718179 AF112201 BT007408 CU677265	-14427	+	NM_001008272 NM_013259 AF303058 AF087855 AK315289 TSC_hg19_v1_chr3_+_111717781 BC015329	-14857	+	NM_018394 TSC_hg19_v1_chr3_+_111697885 AK300018 BC014516 AK093591 AK002204 AB528058 AM392560	-34697	+	AK131211 NM_001042575 BC117322	25944	+	TSC_hg19_v1_chr3_+_111805267 AK303588 NM_001171747 NM_024616 AY830714 AK026839 BC017064 AK298076	72664	+	CU688884 BC030506 AY212246 AK313368 AK128276 AF521911 NM_001190259 NM_001190260 NM_152785	119495	-	NM_001008273|TAGLN3|29114|transgelin 3##AF112201|TAGLN3|29114|transgelin 3##BT007408|TAGLN3|29114|transgelin 3##NM_001008272|TAGLN3|29114|transgelin 3##NM_013259|TAGLN3|29114|transgelin 3##AF303058|TAGLN3|29114|transgelin 3##AF087855|TAGLN3|29114|transgelin 3##AK315289|TAGLN3|29114|transgelin 3##BC015329|TAGLN3|29114|transgelin 3##NM_018394|ABHD10|55347|abhydrolase domain containing 10##AK300018|ABHD10|55347|abhydrolase domain containing 10##BC014516|ABHD10|55347|abhydrolase domain containing 10##AK002204|ABHD10|55347|abhydrolase domain containing 10##AM392560|ABHD10|55347|abhydrolase domain containing 10##AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7##AK303588|C3orf52|79669|chromosome 3 open reading frame 52##NM_001171747|C3orf52|79669|chromosome 3 open reading frame 52##NM_024616|C3orf52|79669|chromosome 3 open reading frame 52##AY830714|C3orf52|79669|chromosome 3 open reading frame 52##AK026839|C3orf52|79669|chromosome 3 open reading frame 52##BC017064|C3orf52|79669|chromosome 3 open reading frame 52##AK298076|C3orf52|79669|chromosome 3 open reading frame 52##BC030506|GCET2|257144|germinal center expressed transcript 2##AY212246|GCET2|257144|germinal center expressed transcript 2##AK313368|GCET2|257144|germinal center expressed transcript 2##AF521911|GCET2|257144|germinal center expressed transcript 2##NM_001190259|GCET2|257144|germinal center expressed transcript 2##NM_001190260|GCET2|257144|germinal center expressed transcript 2##NM_152785|GCET2|257144|germinal center expressed transcript 2	0.948146	CTCF.p2:6:0.948
chr3	61843877	61843982	reg1016619.p2	8.066	+	AB055764 TSC_hg19_v1_chr3_-_61728812	-115118	-	L09247 AB385117 TSC_hg19_v1_chr3_+_61548071	-295953	+	BC047734 TSC_hg19_v1_chr3_+_61547294	-296643	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	460777	+	BC017772 NM_020685	461466	+	AK290464 NM_018008	515260	-	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2	0.042459	
chr9	135848075	135848188	reg1017003.p1	8.066	+	TSC_hg19_v1_chr9_-_135820004 AK303030 AK308412 AK297326 AF013168 BC108668 AK299654 BC070032 NM_000368 NM_001162426 NM_001162427	-28122	-	TSC_hg19_v1_chr9_-_135819985 BC121000 AB190910 BC047772	-28158	-	AK075259 AJ011375 NM_018956	-93845	+	AY428733 NM_001135031 NM_004188	5966	+	TSC_hg19_v1_chr9_+_135894809 BC070500	46676	+	NM_001122823 NM_012087 TSC_hg19_v1_chr9_+_135906094 AK225761 AK311481 AK055092 AF133124 BC011355 BC017337	57968	+	AK303030|TSC1|7248|tuberous sclerosis 1##AK308412|TSC1|7248|tuberous sclerosis 1##AK297326|TSC1|7248|tuberous sclerosis 1##AF013168|TSC1|7248|tuberous sclerosis 1##BC108668|TSC1|7248|tuberous sclerosis 1##AK299654|TSC1|7248|tuberous sclerosis 1##BC070032|TSC1|7248|tuberous sclerosis 1##NM_000368|TSC1|7248|tuberous sclerosis 1##NM_001162426|TSC1|7248|tuberous sclerosis 1##NM_001162427|TSC1|7248|tuberous sclerosis 1##BC121000|TSC1|7248|tuberous sclerosis 1##AB190910|TSC1|7248|tuberous sclerosis 1##BC047772|TSC1|7248|tuberous sclerosis 1##AK075259|C9orf9|11092|chromosome 9 open reading frame 9##AJ011375|C9orf9|11092|chromosome 9 open reading frame 9##NM_018956|C9orf9|11092|chromosome 9 open reading frame 9##AY428733|GFI1B|8328|growth factor independent 1B transcription repressor##NM_001135031|GFI1B|8328|growth factor independent 1B transcription repressor##NM_004188|GFI1B|8328|growth factor independent 1B transcription repressor##BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##NM_001122823|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_012087|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK225761|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK311481|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK055092|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF133124|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC011355|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC017337|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	0.237762	CTCF.p2:20:0.238
chr10	25516142	25516271	reg1017315.p2	8.065	+	AY528411 NM_020752	-51917	+	NM_024838 TSC_hg19_v1_chr10_+_25305540 AK125249 BC035132 BX647989	-210656	+	CU693144 DQ892076 DQ895269 BC064597 AK095021 NM_145010 AY454125 AK292495 BC026165	-211232	-	NM_017433	706795	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	706974	+	NM_000818 NM_001134366	989029	+	AY528411|GPR158|57512|G protein-coupled receptor 158##NM_020752|GPR158|57512|G protein-coupled receptor 158##NM_024838|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AK125249|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BC035132|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BX647989|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##DQ892076|ENKUR|219670|enkurin, TRPC channel interacting protein##DQ895269|ENKUR|219670|enkurin, TRPC channel interacting protein##AK095021|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_145010|ENKUR|219670|enkurin, TRPC channel interacting protein##AY454125|ENKUR|219670|enkurin, TRPC channel interacting protein##AK292495|ENKUR|219670|enkurin, TRPC channel interacting protein##BC026165|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_017433|MYO3A|53904|myosin IIIA##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	0.982449	CTCF.p2:3:0.982
chr9	132648067	132648219	reg1017615.p4	8.065	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-50378	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-50421	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-50459	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	157211	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	157345	-	BC039728 NM_001136557 NM_001136558 NM_020960	167841	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.028094	
chr7	34967685	34967823	reg1018526.p1	8.064	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	-269835	+	AK289963 NM_133468 AK096150 BC060868	-1022612	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-1798673	+	DQ287932 NM_015283	109898	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	258038	-	TSC_hg19_v1_chr7_-_35293701 NM_001077653 NM_001166220 DQ986374	325976	-	AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##NM_001077653|TBX20|57057|T-box 20##NM_001166220|TBX20|57057|T-box 20##DQ986374|TBX20|57057|T-box 20	0.999008	CTCF.p2:12:0.999
chr10	69539357	69539500	reg1009844.p1	8.063	+	AF091606 AK313882 NM_013266	-83491	-	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	-114032	-	NM_178011 BX640611 AY358315 BC111492	-853613	+	CR457184 AF176013 BC017018 AK289537 AF176012 NM_021800 NM_201262	58424	-	TSC_hg19_v1_chr10_+_69644413 AF083106 NM_012238 AF235040	104979	+	AL136741 BC012499 TSC_hg19_v1_chr10_+_69644874	105364	+	AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##CR457184|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176013|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##BC017018|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AK289537|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176012|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_021800|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_201262|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF083106|SIRT1|23411|sirtuin 1##NM_012238|SIRT1|23411|sirtuin 1##AF235040|SIRT1|23411|sirtuin 1##AL136741|SIRT1|23411|sirtuin 1##BC012499|SIRT1|23411|sirtuin 1	0.853869	CTCF.p2:5:0.854
chr22	28447863	28447995	reg1016118.p2	8.063	+	TSC_hg19_v1_chr22_-_28315245 BC018704 D30037 AK313064 CR456541 NM_012399	-132665	-	TSC_hg19_v1_chr22_-_28315203 BC031427	-132722	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	-132755	-	TSC_hg19_v1_chr22_-_29075801 NM_001145418	627864	-	BC004207 AK289360 CR456418 NM_001005735 NM_007194 NM_145862 AK290754 AB164374	689888	-	BC000004 TSC_hg19_v1_chr22_+_29138056 NM_172002 BC065569 CR456462 AY191719 AB528150 CU013013 CU013301	690132	+	BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta##D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta##CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_001145418|TTC28|23331|tetratricopeptide repeat domain 28##BC004207|CHEK2|11200|checkpoint kinase 2##AK289360|CHEK2|11200|checkpoint kinase 2##CR456418|CHEK2|11200|checkpoint kinase 2##NM_001005735|CHEK2|11200|checkpoint kinase 2##NM_007194|CHEK2|11200|checkpoint kinase 2##NM_145862|CHEK2|11200|checkpoint kinase 2##AK290754|CHEK2|11200|checkpoint kinase 2##NM_172002|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##BC065569|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##CR456462|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##AY191719|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)	0.961519	CTCF.p2:-12:0.962
chr2	24047693	24047846	reg1015512.p1	8.063	+	NM_052920	-439472	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2780840	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-2780870	-	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	102177	-	TSC_hg19_v1_chr2_+_24150144 BC037901	102388	+	TSC_hg19_v1_chr2_+_24163332 BC092484 AL832079 NM_181713 BC111997 BC093681 BC143298	115602	+	NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A##BC092484|UBXN2A|165324|UBX domain protein 2A##AL832079|UBXN2A|165324|UBX domain protein 2A##NM_181713|UBXN2A|165324|UBX domain protein 2A##BC111997|UBXN2A|165324|UBX domain protein 2A##BC093681|UBXN2A|165324|UBX domain protein 2A##BC143298|UBXN2A|165324|UBX domain protein 2A	0.987058	CTCF.p2:-24:0.987
chr14	53879700	53879844	reg1019181.p1	8.062	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-259722	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-259804	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-259899	-	NM_130851	541497	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	543761	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	983949	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.979922	CTCF.p2:-6:0.980
chr4	25368760	25368896	reg1017418.p1	8.062	+	TSC_hg19_v1_chr4_+_25314405 NM_024936 BC157834 BC171821 AK299211 AK309675 AY629351 BC016914 AF161537 CU677765	-54381	+	TSC_hg19_v1_chr4_+_25235654 BC051749 NM_018323 AK128622 AK001967 AY091514 AY065990 AF411320	-133110	+	AK296302 AK095450 TSC_hg19_v1_chr4_+_25162325	-206523	+	TSC_hg19_v1_chr4_+_25378862 NM_013367 BC059383	10017	+	TSC_hg19_v1_chr4_+_25378893 AK292336 AF191338	10134	+	NM_001177998 NM_006424 AK292675 AF111856 AK075046 TSC_hg19_v1_chr4_+_25657473 AF146796 BC142704 BC146666	288632	+	NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC051749|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##NM_018323|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK128622|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK001967|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AY091514|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AY065990|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AF411320|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK296302|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK095450|LOC285540|285540|uncharacterized LOC285540##NM_013367|ANAPC4|29945|anaphase promoting complex subunit 4##BC059383|ANAPC4|29945|anaphase promoting complex subunit 4##AK292336|ANAPC4|29945|anaphase promoting complex subunit 4##AF191338|ANAPC4|29945|anaphase promoting complex subunit 4##NM_001177998|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_006424|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK292675|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF111856|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK075046|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF146796|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC142704|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC146666|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2	0.98644	CTCF.p2:7:0.986
chr6	105879250	105879385	reg1016228.p1	8.062	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-28322	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-28359	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-28471	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	654879	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	654918	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	667487	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.805201	CTCF.p2:-12:0.805
chr7	99815686	99815807	reg1008151.p4	8.062	+	TSC_hg19_v1_chr7_+_99775540 NM_012447 AK292394 BC146806 AK302693 BC047490 BC028684 AL833816 BC140932	-40183	+	AJ007798 TSC_hg19_v1_chr7_+_99775380	-40382	+	AB587513 AM392909 CU693354 DQ893325 DQ896641 AL834418 TSC_hg19_v1_chr7_-_99774981 AB209144 AK096281 BC027972 NM_152742 AY093588	-40819	-	NM_024070	1124	+	BC065200 AK290510 TSC_hg19_v1_chr7_-_99869856 BC044886 BC090867 BC033723 BC053367 NM_178831	54084	-	BC056606 NM_001004351	89578	+	NM_012447|STAG3|10734|stromal antigen 3##AK292394|STAG3|10734|stromal antigen 3##BC146806|STAG3|10734|stromal antigen 3##AK302693|STAG3|10734|stromal antigen 3##BC047490|STAG3|10734|stromal antigen 3##BC028684|STAG3|10734|stromal antigen 3##AL833816|STAG3|10734|stromal antigen 3##BC140932|STAG3|10734|stromal antigen 3##AJ007798|STAG3|10734|stromal antigen 3##AM392909|GPC2|221914|glypican 2##DQ893325|GPC2|221914|glypican 2##DQ896641|GPC2|221914|glypican 2##AL834418|GPC2|221914|glypican 2##AK096281|GPC2|221914|glypican 2##BC027972|GPC2|221914|glypican 2##NM_152742|GPC2|221914|glypican 2##AY093588|GPC2|221914|glypican 2##NM_024070|PVRIG|79037|poliovirus receptor related immunoglobulin domain containing##BC065200|GATS|352954|GATS, stromal antigen 3 opposite strand##AK290510|GATS|352954|GATS, stromal antigen 3 opposite strand##BC044886|GATS|352954|GATS, stromal antigen 3 opposite strand##BC090867|GATS|352954|GATS, stromal antigen 3 opposite strand##BC033723|GATS|352954|GATS, stromal antigen 3 opposite strand##BC053367|GATS|352954|GATS, stromal antigen 3 opposite strand##NM_178831|GATS|352954|GATS, stromal antigen 3 opposite strand##BC056606|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)##NM_001004351|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)	0.957154	CTCF.p2:26:0.957
chr8	96317721	96317865	reg1016621.p1	8.062	+	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	-36328	-	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	-36742	+	TSC_hg19_v1_chr8_+_96146116 AK023249	-171657	+	BC127948 BC127947 AJ537424 NM_001001557	855188	-	CR542176 CR542196 TSC_hg19_v1_chr8_-_97247774 AK307085 NM_001199975 BC041005 AK295007 AK311756 M22348 X13585 M26700 BC005230 NM_006294	930016	-	BC012995 NM_015942 TSC_hg19_v1_chr8_-_97273837 AK309002	956024	-	BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6##CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_001199975|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC012995|MTERFD1|51001|MTERF domain containing 1##NM_015942|MTERFD1|51001|MTERF domain containing 1##AK309002|MTERFD1|51001|MTERF domain containing 1	0.999725	CTCF.p2:-1:1.000
chr9	136581044	136581163	reg1018547.p1	8.062	+	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-79595	+	AB528863 BC146946 BC146961 NM_001080515	-135748	-	TSC_hg19_v1_chr9_+_136399879 BC050544 NM_014694	-181178	+	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	22375	-	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	23883	-	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	276343	-	NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC146946|FAM163B|642968|family with sequence similarity 163, member B##BC146961|FAM163B|642968|family with sequence similarity 163, member B##NM_001080515|FAM163B|642968|family with sequence similarity 163, member B##BC050544|ADAMTSL2|9719|ADAMTS-like 2##NM_014694|ADAMTSL2|9719|ADAMTS-like 2##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor	0.0	
chr9	139539029	139539155	reg1017737.p1	8.062	+	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	-98842	-	TSC_hg19_v1_chr9_-_139378220 AB593115	-160850	-	BC036221 NM_152571 AK055336	-161122	+	NM_016215 AL512735 AY358903 BC088371 AY358902	18309	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	21123	+	BC012377 TSC_hg19_v1_chr9_+_139560248	21179	+	AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7##BC012377|EGFL7|51162|EGF-like-domain, multiple 7	0.091231	
chr12	125425327	125425440	reg1013583.p1	8.061	+	NM_021009	-25797	-	AY732488 AY819759 BC008955 BC080583 AB209782 BC000449 AK056939 AK098827 AK129749 AK291539 BC039193 BC093445 AB009010 TSC_hg19_v1_chr12_-_125399197 AK026846	-26210	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	-76910	-	TSC_hg19_v1_chr12_-_125473644 BC037964 NM_032656	48261	-	TSC_hg19_v1_chr12_+_125478217 NM_080626 BC034525	52807	+	TSC_hg19_v1_chr12_+_125478249 AF284094	52877	+	NM_021009|UBC|7316|ubiquitin C##AY732488|UBC|7316|ubiquitin C##AY819759|UBC|7316|ubiquitin C##BC008955|UBC|7316|ubiquitin C##BC080583|UBC|7316|ubiquitin C##AB209782|UBC|7316|ubiquitin C##BC000449|UBC|7316|ubiquitin C##AK056939|UBC|7316|ubiquitin C##AK098827|UBC|7316|ubiquitin C##AK129749|UBC|7316|ubiquitin C##AK291539|UBC|7316|ubiquitin C##BC039193|UBC|7316|ubiquitin C##BC093445|UBC|7316|ubiquitin C##AB009010|UBC|7316|ubiquitin C##AK026846|UBC|7316|ubiquitin C##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1##BC037964|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37##NM_032656|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37##NM_080626|BRI3BP|140707|BRI3 binding protein##BC034525|BRI3BP|140707|BRI3 binding protein##AF284094|BRI3BP|140707|BRI3 binding protein	0.0	
chr7	122710899	122711010	reg1017589.p1	8.061	+	BC095524 NM_016945	-75201	-	TSC_hg19_v1_chr7_-_122526793 NM_001009571 NM_001167940 NM_017954	-184158	-	AY264289 TSC_hg19_v1_chr7_-_122526515 AF401638 BC054339 BC136601 BC144278 BC144279 AK098170 AK126518	-184456	-	AB528233 AK026413 AK314537 AF260824 BC111775 NM_022444	129057	-	BC091520 BC128181 BC128182 AK093153 AX747958 BC032838 BC068607 NM_178827	463690	-	CR933664 BT006695 TSC_hg19_v1_chr7_-_123197862 AK022209 BC020821 BC070236 BC070237 U64028 AK315458 U53468 BC000813 NM_005000	486936	-	BC095524|TAS2R16|50833|taste receptor, type 2, member 16##NM_016945|TAS2R16|50833|taste receptor, type 2, member 16##NM_001009571|CADPS2|93664|Ca++-dependent secretion activator 2##NM_001167940|CADPS2|93664|Ca++-dependent secretion activator 2##NM_017954|CADPS2|93664|Ca++-dependent secretion activator 2##AY264289|CADPS2|93664|Ca++-dependent secretion activator 2##AF401638|CADPS2|93664|Ca++-dependent secretion activator 2##BC054339|CADPS2|93664|Ca++-dependent secretion activator 2##BC136601|CADPS2|93664|Ca++-dependent secretion activator 2##BC144278|CADPS2|93664|Ca++-dependent secretion activator 2##BC144279|CADPS2|93664|Ca++-dependent secretion activator 2##AK126518|CADPS2|93664|Ca++-dependent secretion activator 2##AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##BC091520|IQUB|154865|IQ motif and ubiquitin domain containing##BC128181|IQUB|154865|IQ motif and ubiquitin domain containing##BC128182|IQUB|154865|IQ motif and ubiquitin domain containing##AK093153|IQUB|154865|IQ motif and ubiquitin domain containing##BC032838|IQUB|154865|IQ motif and ubiquitin domain containing##BC068607|IQUB|154865|IQ motif and ubiquitin domain containing##NM_178827|IQUB|154865|IQ motif and ubiquitin domain containing##CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa	0.765415	CTCF.p2:-6:0.765
chrY	1392282	1392425	reg1019353.p1	8.061	+	NM_001161530 NM_172247 M73832 DQ893104 DQ896376 AB590144 CU687176 DQ841258 X54935	-40770	+	NM_001161529 NM_001161531 NM_001161532 NM_006140 NM_172245 NM_172246 NM_172249 AK293086 AK301395 BC071835 M64445 BC002635 AL833597 AK309630 L29348 L29349 U93096 X17648	-54639	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	-110769	-	BC035407 NM_002183	13155	+	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	68616	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	129448	-	NM_001161530|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172247|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M73832|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ893104|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ896376|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ841258|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X54935|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161529|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161531|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161532|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_006140|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172245|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172246|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172249|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK293086|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK301395|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC071835|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M64445|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC002635|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AL833597|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK309630|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29348|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29349|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##U93096|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X17648|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2##BC035407|IL3RA|3563|interleukin 3 receptor, alpha (low affinity)##NM_002183|IL3RA|3563|interleukin 3 receptor, alpha (low affinity)##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like	1.058078	CTCF.p2:-6:0.992
chr1	177749378	177749469	reg1015660.p2	8.059	+	AB051534 AB161694 BC028036 NM_021165	-608842	+	AK296524 TSC_hg19_v1_chr1_+_177140093	-609345	+	TSC_hg19_v1_chr1_-_177134042 AK309094	-615348	-	AB063357 NM_033127 TSC_hg19_v1_chr1_-_177939202	189703	-	BC009106 TSC_hg19_v1_chr1_-_177939393	189947	-	TSC_hg19_v1_chr1_-_178007060 AK092831 BX538051 AB067515	257676	-	AB051534|FAM5B|57795|family with sequence similarity 5, member B##AB161694|FAM5B|57795|family with sequence similarity 5, member B##BC028036|FAM5B|57795|family with sequence similarity 5, member B##NM_021165|FAM5B|57795|family with sequence similarity 5, member B##AK296524|FAM5B|57795|family with sequence similarity 5, member B##AK309094|ASTN1|460|astrotactin 1##AB063357|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##NM_033127|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##BC009106|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AK092831|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##BX538051|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene	0.906246	CTCF.p2:11:0.906
chr1	27372521	27372626	reg1016252.p1	8.059	+	TSC_hg19_v1_chr1_-_27339448 AK122816	-33119	-	BC012790 BC014160 NM_052943 TSC_hg19_v1_chr1_-_27339338	-33239	-	TSC_hg19_v1_chr1_+_27320182 NM_001013642 BC069216	-52380	+	M96066 S68616 NM_003047 TSC_hg19_v1_chr1_-_27481521	108888	-	NM_015023 TSC_hg19_v1_chr1_+_27561056	188461	+	TSC_hg19_v1_chr1_+_27561124 AK315564	188554	+	AK122816|FAM46B|115572|family with sequence similarity 46, member B##BC012790|FAM46B|115572|family with sequence similarity 46, member B##BC014160|FAM46B|115572|family with sequence similarity 46, member B##NM_052943|FAM46B|115572|family with sequence similarity 46, member B##NM_001013642|TRNP1|388610|TMF1-regulated nuclear protein 1##BC069216|TRNP1|388610|TMF1-regulated nuclear protein 1##M96066|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##S68616|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_003047|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1	0.999455	CTCF.p2:12:0.999
chr18	20563271	20563411	reg1018776.p1	8.059	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-49526	+	TSC_hg19_v1_chr18_+_20513319 NM_002894 U72066 AK292481	-49993	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	-565516	-	EF028204 NM_001100619	152385	+	BC037218 NM_138375	172447	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	454530	-	BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##NM_002894|RBBP8|5932|retinoblastoma binding protein 8##U72066|RBBP8|5932|retinoblastoma binding protein 8##AK292481|RBBP8|5932|retinoblastoma binding protein 8##HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241	0.955821	CTCF.p2:27:0.956
chr4	165689802	165689943	reg1017608.p1	8.059	+	AK289711 NM_001166373	-385466	-	NM_012403	-571010	-	AB463878 AK000675 AK301408 NM_017923	-1155157	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	188230	+	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	188279	+	BC089393 NM_001012414	208945	-	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61	0.991325	CTCF.p2:-3:0.991
chr9	35096167	35096330	reg1017195.p1	8.059	+	TSC_hg19_v1_chr9_-_35079753 BC011623 AK293427 AK312987 AJ007669 NM_004629	-16367	-	BT009813 CU674000 AB464437 DQ892166 DQ895360 U70310 BC000032 TSC_hg19_v1_chr9_-_35079678 AK311348	-16644	-	TSC_hg19_v1_chr9_-_35072646 NM_007126	-23558	-	NM_001201484 NM_032634 AK090433 TSC_hg19_v1_chr9_-_35096578 AK074064 NM_152850	352	-	TSC_hg19_v1_chr9_-_35103065 AF161458	6816	-	TSC_hg19_v1_chr9_-_35103124 CU677964 DQ895920 DQ892677 BC003025 AK130546 AK308552 BC014990 AF282596 AK027405 AK225114 BC010152 AK307343 BC002442 AK303883 AK223102	6868	-	BC011623|FANCG|2189|Fanconi anemia, complementation group G##AK293427|FANCG|2189|Fanconi anemia, complementation group G##AK312987|FANCG|2189|Fanconi anemia, complementation group G##AJ007669|FANCG|2189|Fanconi anemia, complementation group G##NM_004629|FANCG|2189|Fanconi anemia, complementation group G##BT009813|FANCG|2189|Fanconi anemia, complementation group G##DQ892166|FANCG|2189|Fanconi anemia, complementation group G##DQ895360|FANCG|2189|Fanconi anemia, complementation group G##U70310|FANCG|2189|Fanconi anemia, complementation group G##BC000032|FANCG|2189|Fanconi anemia, complementation group G##AK311348|FANCG|2189|Fanconi anemia, complementation group G##NM_007126|VCP|7415|valosin containing protein##NM_001201484|PIGO|84720|phosphatidylinositol glycan anchor biosynthesis, class O##NM_032634|PIGO|84720|phosphatidylinositol glycan anchor biosynthesis, class O##AK090433|PIGO|84720|phosphatidylinositol glycan anchor biosynthesis, class O##AK074064|PIGO|84720|phosphatidylinositol glycan anchor biosynthesis, class O##NM_152850|PIGO|84720|phosphatidylinositol glycan anchor biosynthesis, class O##AF161458|STOML2|30968|stomatin (EPB72)-like 2##DQ895920|STOML2|30968|stomatin (EPB72)-like 2##DQ892677|STOML2|30968|stomatin (EPB72)-like 2##BC003025|STOML2|30968|stomatin (EPB72)-like 2##AK130546|STOML2|30968|stomatin (EPB72)-like 2##BC014990|STOML2|30968|stomatin (EPB72)-like 2##AF282596|STOML2|30968|stomatin (EPB72)-like 2##AK027405|STOML2|30968|stomatin (EPB72)-like 2##AK225114|STOML2|30968|stomatin (EPB72)-like 2##BC010152|STOML2|30968|stomatin (EPB72)-like 2##AK307343|STOML2|30968|stomatin (EPB72)-like 2##BC002442|STOML2|30968|stomatin (EPB72)-like 2##AK303883|STOML2|30968|stomatin (EPB72)-like 2##AK223102|STOML2|30968|stomatin (EPB72)-like 2	0.399581	CTCF.p2:-1:0.400
chr7	82358831	82358984	reg1019266.p1	8.058	+	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	-285827	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	-286061	-	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-959533	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	432962	-	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	433329	-	AK303925 NM_001178129	911839	-	NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	0.960638	CTCF.p2:15:0.961
chr9	4640158	4640270	reg1017162.p2	8.058	+	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	-149777	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-340183	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-340251	-	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	22097	+	AK295831 NM_001039395	26455	-	TSC_hg19_v1_chr9_+_4679596 AK000497 NM_017913 AK000646 AK225510 BC014133 CU680796	39447	+	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68##AK000497|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##NM_017913|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK000646|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK225510|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##BC014133|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1	0.798422	CTCF.p2:15:0.798
chr11	1596041	1596140	reg1014924.p1	8.057	+	NM_004420 U27193 TSC_hg19_v1_chr11_-_1593332	-2849	-	AB066564 NM_001172223 AK296658	-88198	-	TSC_hg19_v1_chr11_+_1463679 AK074411 AK297306	-132374	+	AB528866 AB126070 NM_001005922	10406	-	AB528163 BC132882 BC132908 AJ628245 NM_001004325 AB126071	23416	-	AY597812 AB528164 AB126072 NM_001012708	33563	-	NM_004420|DUSP8|1850|dual specificity phosphatase 8##U27193|DUSP8|1850|dual specificity phosphatase 8##AB066564|MOB2|81532|MOB kinase activator 2##NM_001172223|MOB2|81532|MOB kinase activator 2##AK296658|MOB2|81532|MOB kinase activator 2##AK074411|BRSK2|9024|BR serine/threonine kinase 2##AK297306|BRSK2|9024|BR serine/threonine kinase 2##AB126070|KRTAP5-1|387264|keratin associated protein 5-1##NM_001005922|KRTAP5-1|387264|keratin associated protein 5-1##BC132882|KRTAP5-2|440021|keratin associated protein 5-2##BC132908|KRTAP5-2|440021|keratin associated protein 5-2##AJ628245|KRTAP5-2|440021|keratin associated protein 5-2##NM_001004325|KRTAP5-2|440021|keratin associated protein 5-2##AB126071|KRTAP5-2|440021|keratin associated protein 5-2##AY597812|KRTAP5-3|387266|keratin associated protein 5-3##AB126072|KRTAP5-3|387266|keratin associated protein 5-3##NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3	0.711454	CTCF.p2:-19:0.711
chr17	26220411	26220543	reg1018536.p1	8.057	+	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	-86	-	BC130283 BC144126 U05810 L09210 X73029 AF068236 AK304252 NM_000625 TSC_hg19_v1_chr17_-_26127556	-92962	-	U31511 TSC_hg19_v1_chr17_-_26127402	-93079	-	TSC_hg19_v1_chr17_+_26369661 AK315315 AF197898 NM_016231 AF180819	149176	+	AB384832 AK024686 TSC_hg19_v1_chr17_+_26370066	149524	+	NM_014573 TSC_hg19_v1_chr17_+_26646214 L19183 AK299511 AK307678 BC017362 BC091504 AK293331	425716	+	AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108##BC130283|NOS2|4843|nitric oxide synthase 2, inducible##BC144126|NOS2|4843|nitric oxide synthase 2, inducible##U05810|NOS2|4843|nitric oxide synthase 2, inducible##L09210|NOS2|4843|nitric oxide synthase 2, inducible##X73029|NOS2|4843|nitric oxide synthase 2, inducible##AF068236|NOS2|4843|nitric oxide synthase 2, inducible##AK304252|NOS2|4843|nitric oxide synthase 2, inducible##NM_000625|NOS2|4843|nitric oxide synthase 2, inducible##U31511|NOS2|4843|nitric oxide synthase 2, inducible##AK315315|NLK|51701|nemo-like kinase##AF197898|NLK|51701|nemo-like kinase##NM_016231|NLK|51701|nemo-like kinase##AF180819|NLK|51701|nemo-like kinase##AK024686|NLK|51701|nemo-like kinase##NM_014573|TMEM97|27346|transmembrane protein 97##L19183|TMEM97|27346|transmembrane protein 97##AK299511|TMEM97|27346|transmembrane protein 97##AK307678|TMEM97|27346|transmembrane protein 97##BC017362|TMEM97|27346|transmembrane protein 97##BC091504|TMEM97|27346|transmembrane protein 97##AK293331|TMEM97|27346|transmembrane protein 97	0.997475	CTCF.p2:-23:0.997
chr19	42023334	42023467	reg1015626.p2	8.057	+	NM_001130514	-74338	+	TSC_hg19_v1_chr19_-_41945831 AK298197 NM_001167869 NM_001167870 NM_001167871 NM_018035	-77567	-	TSC_hg19_v1_chr19_-_41945814 BC013323 AK316313	-77586	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	59177	+	D90276 AK298701 NM_001817	110034	-	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	168752	-	NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##AK298197|ATP5SL|55101|ATP5S-like##NM_001167869|ATP5SL|55101|ATP5S-like##NM_001167870|ATP5SL|55101|ATP5S-like##NM_001167871|ATP5SL|55101|ATP5S-like##NM_018035|ATP5SL|55101|ATP5S-like##BC013323|ATP5SL|55101|ATP5S-like##AK316313|ATP5SL|55101|ATP5S-like##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7	0.0	
chr20	8834562	8834668	reg1016094.p1	8.057	+	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	-721585	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-834143	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-834208	-	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	215068	+	AK307482 TSC_hg19_v1_chr20_+_9049806	215183	+	NM_182797 BC117458 BC143868	363443	+	AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4	0.989255	CTCF.p2:-4:0.989
chr12	49381980	49382099	reg1016557.p2	8.056	+	NM_005430	-9804	+	U81787 NM_003394 AK312906	-16441	-	TSC_hg19_v1_chr12_-_49351310 M74491	-30735	-	AB527129 AB018292 BC136398 BC136399 TSC_hg19_v1_chr12_-_49393076 NM_015086 BC039264	10961	-	TSC_hg19_v1_chr12_-_49412538 AK293332 NM_001206710 AK303276 AK307994 AK310250 BC000358 AK097606 NM_001206709 NM_002733	30532	-	AF010403 NM_003482	67067	-	NM_005430|WNT1|7471|wingless-type MMTV integration site family, member 1##U81787|WNT10B|7480|wingless-type MMTV integration site family, member 10B##NM_003394|WNT10B|7480|wingless-type MMTV integration site family, member 10B##AK312906|WNT10B|7480|wingless-type MMTV integration site family, member 10B##M74491|ARF3|377|ADP-ribosylation factor 3##AB018292|DDN|23109|dendrin##BC136398|DDN|23109|dendrin##BC136399|DDN|23109|dendrin##NM_015086|DDN|23109|dendrin##BC039264|DDN|23109|dendrin##AK293332|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206710|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK303276|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK307994|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK310250|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##BC000358|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK097606|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206709|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_002733|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2	0.999105	CTCF.p2:0:0.999
chr3	123005256	123005359	reg1016119.p1	8.056	+	NM_012430 TSC_hg19_v1_chr3_+_122920787 AK315771 AF100749	-84517	+	NM_006810 TSC_hg19_v1_chr3_+_122785922 BC001625 D49490	-219389	+	TSC_hg19_v1_chr3_-_122746605 AK309848	-258699	-	AK303070 NM_001199642	129881	-	AB527359 NM_183357	162084	-	TSC_hg19_v1_chr3_-_123303927 CU687458 AK289983 NM_198402 AK125375 BC060839 AY191814 BC049369	298626	-	NM_012430|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK315771|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AF100749|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##NM_006810|PDIA5|10954|protein disulfide isomerase family A, member 5##BC001625|PDIA5|10954|protein disulfide isomerase family A, member 5##D49490|PDIA5|10954|protein disulfide isomerase family A, member 5##AK309848|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK303070|ADCY5|111|adenylate cyclase 5##NM_001199642|ADCY5|111|adenylate cyclase 5##NM_183357|ADCY5|111|adenylate cyclase 5##AK289983|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##NM_198402|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC060839|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AY191814|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC049369|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	0.928286	CTCF.p2:1:0.928
chr5	152528061	152528192	reg1015425.p1	8.056	+	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	-743375	-	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	-1223764	-	TSC_hg19_v1_chr5_+_151151662 X78262	-1376462	+	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	342139	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	890331	-	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	890398	+	AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##X78262|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3	0.931868	CTCF.p2:0:0.932
chr8	42011015	42011133	reg1015916.p3	8.056	+	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	-541	+	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	-101575	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-256764	-	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	54014	-	AK289387 AK290575 NM_000930 NM_033011 TSC_hg19_v1_chr8_-_42065195	54120	-	TSC_hg19_v1_chr8_+_42128819 NM_001190720 NM_001242778 NM_001556	117734	+	NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue##AK289387|PLAT|5327|plasminogen activator, tissue##AK290575|PLAT|5327|plasminogen activator, tissue##NM_000930|PLAT|5327|plasminogen activator, tissue##NM_033011|PLAT|5327|plasminogen activator, tissue##NM_001190720|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001242778|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001556|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	0.438374	CTCF.p2:-28:0.438
chr12	69751412	69751519	reg1016012.p1	8.055	+	TSC_hg19_v1_chr12_+_69742163 AK310930 AK311779 J03801 FJ795023 BC004147 M21119 M19045 AB463851 DQ892271 DQ895472 U25677	-9256	+	TSC_hg19_v1_chr12_+_69742133 AK130149 NM_000239	-9334	+	TSC_hg19_v1_chr12_+_69633357 BC005000 BC000714 X67337 AK292024 CU674352 CU678850 DQ892159 EU176688	-118076	+	TSC_hg19_v1_chr12_+_69753535 NM_006530 U61384 AJ245746 BC000994 AK001413 AB464359 EU446926	2141	+	TSC_hg19_v1_chr12_+_69864170 NM_001042555 NM_006654 BC021562 AK312477	112677	+	TSC_hg19_v1_chr12_+_69979238 NM_006431 AK290767 BC113514 BC113516 AK297685 AF026166	227759	+	AK311779|LYZ|4069|lysozyme##J03801|LYZ|4069|lysozyme##FJ795023|LYZ|4069|lysozyme##BC004147|LYZ|4069|lysozyme##M21119|LYZ|4069|lysozyme##M19045|LYZ|4069|lysozyme##DQ892271|LYZ|4069|lysozyme##DQ895472|LYZ|4069|lysozyme##U25677|LYZ|4069|lysozyme##AK130149|LYZ|4069|lysozyme##NM_000239|LYZ|4069|lysozyme##BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##NM_006530|YEATS4|8089|YEATS domain containing 4##U61384|YEATS4|8089|YEATS domain containing 4##AJ245746|YEATS4|8089|YEATS domain containing 4##BC000994|YEATS4|8089|YEATS domain containing 4##AK001413|YEATS4|8089|YEATS domain containing 4##EU446926|YEATS4|8089|YEATS domain containing 4##NM_001042555|FRS2|10818|fibroblast growth factor receptor substrate 2##NM_006654|FRS2|10818|fibroblast growth factor receptor substrate 2##BC021562|FRS2|10818|fibroblast growth factor receptor substrate 2##AK312477|FRS2|10818|fibroblast growth factor receptor substrate 2##NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	0.027291	
chr2	162803172	162803299	reg1014683.p2	8.055	+	NM_001178015 NM_001178016 NM_022058 BC051190 AK294767 AK308529 AK309839 BC038298 AK293793 AB040457 BC136269 BC143714 AY376402	-322299	+	AK057394 TSC_hg19_v1_chr2_-_162364248	-438982	-	TSC_hg19_v1_chr2_+_162272908 U49250 AB529217 HQ258587	-530329	+	AY429533 TSC_hg19_v1_chr2_-_162929965 AY429531 AY429532 BC013329 AB451339 AB451488 AB590646 M80536	126727	-	M74777 TSC_hg19_v1_chr2_-_162930507	127268	-	TSC_hg19_v1_chr2_-_162930585 X60708	127342	-	NM_001178015|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##NM_001178016|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##NM_022058|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC051190|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK294767|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK308529|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK309839|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC038298|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK293793|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AB040457|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC136269|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC143714|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AY376402|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK057394|AHCTF1P1|285116|AT hook containing transcription factor 1 pseudogene 1##U49250|TBR1|10716|T-box, brain, 1##HQ258587|TBR1|10716|T-box, brain, 1##AY429533|DPP4|1803|dipeptidyl-peptidase 4##AY429531|DPP4|1803|dipeptidyl-peptidase 4##AY429532|DPP4|1803|dipeptidyl-peptidase 4##BC013329|DPP4|1803|dipeptidyl-peptidase 4##AB451339|DPP4|1803|dipeptidyl-peptidase 4##AB451488|DPP4|1803|dipeptidyl-peptidase 4##M80536|DPP4|1803|dipeptidyl-peptidase 4##M74777|DPP4|1803|dipeptidyl-peptidase 4##X60708|DPP4|1803|dipeptidyl-peptidase 4	0.663298	CTCF.p2:0:0.663
chr2	68067706	68067854	reg1018650.p1	8.055	+	TSC_hg19_v1_chr2_+_67624467 NM_019002 AJ242682 BC033075 BC040001	-443298	+	TSC_hg19_v1_chr2_+_66666452 AK297109	-1401330	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	-1404940	+	BC016284 TSC_hg19_v1_chr2_-_68290140 X95592 BC009584 BC009589 BC005235 AK290451	222354	-	NM_001190263 NM_001190265 NM_006333 NM_173177 TSC_hg19_v1_chr2_-_68290160	222380	-	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	316854	-	NM_019002|ETAA1|54465|Ewing tumor-associated antigen 1##AJ242682|ETAA1|54465|Ewing tumor-associated antigen 1##BC033075|ETAA1|54465|Ewing tumor-associated antigen 1##BC040001|ETAA1|54465|Ewing tumor-associated antigen 1##AK297109|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##BC016284|C1D|10438|C1D nuclear receptor corepressor##X95592|C1D|10438|C1D nuclear receptor corepressor##BC009584|C1D|10438|C1D nuclear receptor corepressor##BC009589|C1D|10438|C1D nuclear receptor corepressor##BC005235|C1D|10438|C1D nuclear receptor corepressor##AK290451|C1D|10438|C1D nuclear receptor corepressor##NM_001190263|C1D|10438|C1D nuclear receptor corepressor##NM_001190265|C1D|10438|C1D nuclear receptor corepressor##NM_006333|C1D|10438|C1D nuclear receptor corepressor##NM_173177|C1D|10438|C1D nuclear receptor corepressor##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92	0.393686	CTCF.p2:20:0.394
chr4	90032427	90032522	reg1016528.p2	8.055	+	CU687656 BC063126 BC041029 BC053569 BX647410 NM_014883	-54255	-	AB385402 AB020721 TSC_hg19_v1_chr4_-_89744384 AK027138 BC033006 BC086875 BC058029 AK296932 NM_001015045 AK091787 AX747185	-288193	-	BC104883 TSC_hg19_v1_chr4_-_89618996 AL834329 AK054689 BC022544 NM_153757	-413499	-	AK091881 AX747234 TSC_hg19_v1_chr4_-_90032571	85	-	AK027653 NM_145715	1493	+	AK124616 TSC_hg19_v1_chr4_-_90228950	196477	-	BC063126|FAM13A|10144|family with sequence similarity 13, member A##BC041029|FAM13A|10144|family with sequence similarity 13, member A##BC053569|FAM13A|10144|family with sequence similarity 13, member A##BX647410|FAM13A|10144|family with sequence similarity 13, member A##NM_014883|FAM13A|10144|family with sequence similarity 13, member A##AB020721|FAM13A|10144|family with sequence similarity 13, member A##AK027138|FAM13A|10144|family with sequence similarity 13, member A##BC033006|FAM13A|10144|family with sequence similarity 13, member A##BC086875|FAM13A|10144|family with sequence similarity 13, member A##BC058029|FAM13A|10144|family with sequence similarity 13, member A##AK296932|FAM13A|10144|family with sequence similarity 13, member A##NM_001015045|FAM13A|10144|family with sequence similarity 13, member A##AK091787|FAM13A|10144|family with sequence similarity 13, member A##BC104883|NAP1L5|266812|nucleosome assembly protein 1-like 5##AL834329|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK054689|NAP1L5|266812|nucleosome assembly protein 1-like 5##BC022544|NAP1L5|266812|nucleosome assembly protein 1-like 5##NM_153757|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK091881|FAM13A|10144|family with sequence similarity 13, member A##AK027653|TIGD2|166815|tigger transposable element derived 2##NM_145715|TIGD2|166815|tigger transposable element derived 2##AK124616|GPRIN3|285513|GPRIN family member 3	0.982535	CTCF.p2:7:0.983
chr19	19336009	19336150	reg1018342.p1	8.054	+	TSC_hg19_v1_chr19_+_19322766 NM_004386 AB210004	-13279	+	AY101377 AK301426 BC057837 NM_176880	-21929	-	TSC_hg19_v1_chr19_+_19303746 AF105427 AF077196 AF105428	-32327	+	TSC_hg19_v1_chr19_-_19372371 AB107883 AB527158	36292	-	AY262756 TSC_hg19_v1_chr19_-_19373614 BC142644 NM_023002 BC142698	37532	-	AF255923 BC120986 BC120987 TSC_hg19_v1_chr19_-_19384091 AK026307 AK097070 NM_001001524	47997	-	NM_004386|NCAN|1463|neurocan##AB210004|NCAN|1463|neurocan##AY101377|NR2C2AP|126382|nuclear receptor 2C2-associated protein##AK301426|NR2C2AP|126382|nuclear receptor 2C2-associated protein##BC057837|NR2C2AP|126382|nuclear receptor 2C2-associated protein##NM_176880|NR2C2AP|126382|nuclear receptor 2C2-associated protein##AF105427|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##AF077196|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##AF105428|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##AB107883|HAPLN4|404037|hyaluronan and proteoglycan link protein 4##AY262756|HAPLN4|404037|hyaluronan and proteoglycan link protein 4##BC142644|HAPLN4|404037|hyaluronan and proteoglycan link protein 4##NM_023002|HAPLN4|404037|hyaluronan and proteoglycan link protein 4##BC142698|HAPLN4|404037|hyaluronan and proteoglycan link protein 4##AF255923|TM6SF2|53345|transmembrane 6 superfamily member 2##BC120986|TM6SF2|53345|transmembrane 6 superfamily member 2##BC120987|TM6SF2|53345|transmembrane 6 superfamily member 2##AK026307|TM6SF2|53345|transmembrane 6 superfamily member 2##AK097070|TM6SF2|53345|transmembrane 6 superfamily member 2##NM_001001524|TM6SF2|53345|transmembrane 6 superfamily member 2	0.809381	CTCF.p2:14:0.809
chr4	39660488	39660612	reg1019580.p1	8.054	+	TSC_hg19_v1_chr4_-_39640486 AK023351 BC008502 NM_174921 AK307146	-19994	-	TSC_hg19_v1_chr4_+_39529635 AK056558	-130924	+	TSC_hg19_v1_chr4_-_39529187 NM_001184700 NM_001184701 NM_003359	-131375	-	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	39254	+	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	318788	-	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	319043	-	AK023351|C4orf34|201895|chromosome 4 open reading frame 34##BC008502|C4orf34|201895|chromosome 4 open reading frame 34##NM_174921|C4orf34|201895|chromosome 4 open reading frame 34##AK307146|C4orf34|201895|chromosome 4 open reading frame 34##NM_001184700|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001184701|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_003359|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	0.545645	CTCF.p2:31:0.546
chr9	135900807	135900910	reg1013636.p1	8.054	+	TSC_hg19_v1_chr9_+_135894809 BC070500	-6051	+	AY428733 NM_001135031 NM_004188	-46761	+	TSC_hg19_v1_chr9_-_135820004 AK303030 AK308412 AK297326 AF013168 BC108668 AK299654 BC070032 NM_000368 NM_001162426 NM_001162427	-80849	-	NM_001122823 NM_012087 TSC_hg19_v1_chr9_+_135906094 AK225761 AK311481 AK055092 AF133124 BC011355 BC017337	5241	+	TSC_hg19_v1_chr9_+_135906386 AK000194 AK097295 AK293980 BC006409 AY007123 DQ892071 DQ895265 AJ420443 BC030157	5530	+	NM_001807 S79774 M85201 BC042510 AK299965	36517	+	BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AY428733|GFI1B|8328|growth factor independent 1B transcription repressor##NM_001135031|GFI1B|8328|growth factor independent 1B transcription repressor##NM_004188|GFI1B|8328|growth factor independent 1B transcription repressor##AK303030|TSC1|7248|tuberous sclerosis 1##AK308412|TSC1|7248|tuberous sclerosis 1##AK297326|TSC1|7248|tuberous sclerosis 1##AF013168|TSC1|7248|tuberous sclerosis 1##BC108668|TSC1|7248|tuberous sclerosis 1##AK299654|TSC1|7248|tuberous sclerosis 1##BC070032|TSC1|7248|tuberous sclerosis 1##NM_000368|TSC1|7248|tuberous sclerosis 1##NM_001162426|TSC1|7248|tuberous sclerosis 1##NM_001162427|TSC1|7248|tuberous sclerosis 1##NM_001122823|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_012087|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK225761|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK311481|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK055092|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF133124|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC011355|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC017337|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)	0.830069	CTCF.p2:4:0.830
chr14	86504874	86504983	reg1015006.p2	8.053	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-505343	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-508387	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-508455	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	1954535	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	1954631	-	NM_001201402	1955080	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	0.69608	CTCF.p2:5:0.696
chr10	11834904	11835024	reg1017580.p1	8.052	+	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	-50566	+	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	-181328	-	NM_001080491	-260691	-	TSC_hg19_v1_chr10_+_11865354 BC017269 BC048800 NM_153256	30394	+	AK056703 TSC_hg19_v1_chr10_-_11936707	101738	-	TSC_hg19_v1_chr10_-_12084777 BC054011 AK310925 BC114964 BC115737 BC090919 NM_015542 AF318574 AF301013 AK096191	249844	-	NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_001080491|USP6NL|9712|USP6 N-terminal like##BC017269|C10orf47|254427|chromosome 10 open reading frame 47##BC048800|C10orf47|254427|chromosome 10 open reading frame 47##NM_153256|C10orf47|254427|chromosome 10 open reading frame 47##AK056703|LOC219731|219731|uncharacterized LOC219731##AK310925|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC114964|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC115737|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC090919|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##NM_015542|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AF318574|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AF301013|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AK096191|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)	0.830069	CTCF.p2:-20:0.830
chr2	118593608	118593754	reg1017416.p2	8.052	+	TSC_hg19_v1_chr2_+_118572298 BC003360 BC001238	-21364	+	AK001467 TSC_hg19_v1_chr2_+_118572283	-21398	+	NM_006773 TSC_hg19_v1_chr2_+_118572276 BC024739	-21413	+	AM393188 AM393503 AM393699 AB384355 AK057926 TSC_hg19_v1_chr2_-_118771647 BC093018 AK290722 AK309040 BC012052 AB209993	177933	-	TSC_hg19_v1_chr2_-_118771677 BC028609	178003	-	TSC_hg19_v1_chr2_-_118771720 NM_019044	178052	-	BC003360|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC001238|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##AK001467|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##NM_006773|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC024739|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##AM393188|CCDC93|54520|coiled-coil domain containing 93##AM393503|CCDC93|54520|coiled-coil domain containing 93##AM393699|CCDC93|54520|coiled-coil domain containing 93##AK057926|CCDC93|54520|coiled-coil domain containing 93##BC093018|CCDC93|54520|coiled-coil domain containing 93##AK290722|CCDC93|54520|coiled-coil domain containing 93##AK309040|CCDC93|54520|coiled-coil domain containing 93##BC012052|CCDC93|54520|coiled-coil domain containing 93##AB209993|CCDC93|54520|coiled-coil domain containing 93##BC028609|CCDC93|54520|coiled-coil domain containing 93##NM_019044|CCDC93|54520|coiled-coil domain containing 93	0.976537	CTCF.p2:-9:0.952
chr8	70534066	70534185	reg1013809.p1	8.052	+	AY101175 TSC_hg19_v1_chr8_+_70405081 AK055607 BX571746	-129036	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	-129086	+	TSC_hg19_v1_chr8_+_70379077 AK307951	-155045	+	BC137424 BC144618 NM_001146009	211278	-	AK022760 NM_001146008	211499	-	AK308488 AF205075 AK096879 NM_030958	213124	-	AY101175|SULF1|23213|sulfatase 1##AK055607|SULF1|23213|sulfatase 1##BX571746|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	0.964953	CTCF.p2:12:0.965
chr6	129691697	129691843	reg1017704.p1	8.051	+	NM_000426 NM_001079823 Z26653	-487457	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-850114	-	AK124031 NM_001164687	-1452012	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	339556	-	NM_001010876	490645	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	647955	+	NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	0.995285	CTCF.p2:-23:0.995
chr15	84704272	84704398	reg1016979.p2	8.050	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-381508	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-588107	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-588275	+	NM_001243531	136906	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	439946	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	493137	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.015116	
chr12	102063941	102064084	reg1016659.p2	8.049	+	AK296681 NM_002465 NM_206819 NM_206820 NM_206821 AK056587 AK292976 AK295727 AK303401 BC015187 BC030980 BC065720 TSC_hg19_v1_chr12_+_101988748 BC092418 X66276 X73114 AL831993 AL832000 AL832332 AL832350 AL832354 AL832456 BC117217 BC143495 BC143502 BC143503 BC143504 AL834249 BX649073 AB385254 AM392734 EU831907 EU832001	-75216	+	TSC_hg19_v1_chr12_-_101801573 AK311793 AK302911 AK299062 BC007000 BX537387 NM_001177	-262469	-	TSC_hg19_v1_chr12_+_101673904 NM_014503 AK307934 AJ006778	-390107	+	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	27610	+	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	69207	-	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	160574	-	AK296681|MYBPC1|4604|myosin binding protein C, slow type##NM_002465|MYBPC1|4604|myosin binding protein C, slow type##NM_206819|MYBPC1|4604|myosin binding protein C, slow type##NM_206820|MYBPC1|4604|myosin binding protein C, slow type##NM_206821|MYBPC1|4604|myosin binding protein C, slow type##AK056587|MYBPC1|4604|myosin binding protein C, slow type##AK292976|MYBPC1|4604|myosin binding protein C, slow type##AK295727|MYBPC1|4604|myosin binding protein C, slow type##AK303401|MYBPC1|4604|myosin binding protein C, slow type##BC015187|MYBPC1|4604|myosin binding protein C, slow type##BC030980|MYBPC1|4604|myosin binding protein C, slow type##BC065720|MYBPC1|4604|myosin binding protein C, slow type##BC092418|MYBPC1|4604|myosin binding protein C, slow type##X66276|MYBPC1|4604|myosin binding protein C, slow type##X73114|MYBPC1|4604|myosin binding protein C, slow type##AL831993|MYBPC1|4604|myosin binding protein C, slow type##AL832000|MYBPC1|4604|myosin binding protein C, slow type##AL832332|MYBPC1|4604|myosin binding protein C, slow type##AL832350|MYBPC1|4604|myosin binding protein C, slow type##AL832354|MYBPC1|4604|myosin binding protein C, slow type##AL832456|MYBPC1|4604|myosin binding protein C, slow type##BC117217|MYBPC1|4604|myosin binding protein C, slow type##BC143495|MYBPC1|4604|myosin binding protein C, slow type##BC143502|MYBPC1|4604|myosin binding protein C, slow type##BC143503|MYBPC1|4604|myosin binding protein C, slow type##BC143504|MYBPC1|4604|myosin binding protein C, slow type##AL834249|MYBPC1|4604|myosin binding protein C, slow type##BX649073|MYBPC1|4604|myosin binding protein C, slow type##AM392734|MYBPC1|4604|myosin binding protein C, slow type##EU831907|MYBPC1|4604|myosin binding protein C, slow type##EU832001|MYBPC1|4604|myosin binding protein C, slow type##AK311793|ARL1|400|ADP-ribosylation factor-like 1##AK302911|ARL1|400|ADP-ribosylation factor-like 1##AK299062|ARL1|400|ADP-ribosylation factor-like 1##BC007000|ARL1|400|ADP-ribosylation factor-like 1##BX537387|ARL1|400|ADP-ribosylation factor-like 1##NM_001177|ARL1|400|ADP-ribosylation factor-like 1##NM_014503|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK307934|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AJ006778|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3##AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits	0.0	
chr16	21095066	21095246	reg1000497.p1	8.049	+	TSC_hg19_v1_chr16_+_20912407 BC017039	-182748	+	AK311415 NM_001128301 NM_001128302 TSC_hg19_v1_chr16_+_20912121 AK311881	-183035	+	BX648998 NM_173475 TSC_hg19_v1_chr16_-_20911681 BC040442 BX648185	-183506	-	NM_020422 TSC_hg19_v1_chr16_+_21169994 AK074667 AK293557 BC015812	74826	+	AF494040 NM_017539	75605	-	BC096304 BC096305 BC096306 BC096307 M90366 NM_003460 AK313003 AK293805 AK308820	127724	-	BC017039|LYRM1|57149|LYR motif containing 1##AK311415|LYRM1|57149|LYR motif containing 1##NM_001128301|LYRM1|57149|LYR motif containing 1##NM_001128302|LYRM1|57149|LYR motif containing 1##AK311881|LYRM1|57149|LYR motif containing 1##BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_020422|TMEM159|57146|transmembrane protein 159##AK074667|TMEM159|57146|transmembrane protein 159##AK293557|TMEM159|57146|transmembrane protein 159##BC015812|TMEM159|57146|transmembrane protein 159##AF494040|DNAH3|55567|dynein, axonemal, heavy chain 3##NM_017539|DNAH3|55567|dynein, axonemal, heavy chain 3##BC096304|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096305|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096306|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096307|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##M90366|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##NM_003460|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK313003|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK293805|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK308820|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)	0.0	
chr12	6075161	6075288	reg1016480.p2	8.048	+	AJ272204 NM_020373	-19827	-	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	-20750	-	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	-471886	+	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	158535	-	TSC_hg19_v1_chr12_+_6309565 NM_001769 AK315219 AK308700 AK296332 AK309527 AY966455 X60111 AK296894 AK298431 BC011988 M38690 AY423720 DQ891314 DQ894498 AB590218 CU680148 L34068	234346	+	AK001527 NM_018173 BC104751 BC105961 BC109095	344409	+	AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor##NM_001769|CD9|928|CD9 molecule##AK315219|CD9|928|CD9 molecule##AK308700|CD9|928|CD9 molecule##AK296332|CD9|928|CD9 molecule##AK309527|CD9|928|CD9 molecule##AY966455|CD9|928|CD9 molecule##X60111|CD9|928|CD9 molecule##AK296894|CD9|928|CD9 molecule##AK298431|CD9|928|CD9 molecule##BC011988|CD9|928|CD9 molecule##M38690|CD9|928|CD9 molecule##AY423720|CD9|928|CD9 molecule##DQ891314|CD9|928|CD9 molecule##DQ894498|CD9|928|CD9 molecule##L34068|CD9|928|CD9 molecule##AK001527|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_018173|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC104751|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC105961|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC109095|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6	1.030872	CTCF.p2:0:0.998
chr8	121820990	121821118	reg1017583.p1	8.048	+	TSC_hg19_v1_chr8_+_121457658 AK022122 AK300762 BC013136 NM_022045 EU176294 EU176618	-363378	+	BC021744 NM_014078	-363419	-	TSC_hg19_v1_chr8_-_121457391 AK311924	-363661	-	TSC_hg19_v1_chr8_+_121823539 AK302130	2487	+	TSC_hg19_v1_chr8_-_121823718 AF028828	2707	-	TSC_hg19_v1_chr8_-_121824090 AB590740	3009	-	AK022122|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##AK300762|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##BC013136|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##NM_022045|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##EU176294|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##EU176618|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##BC021744|MRPL13|28998|mitochondrial ribosomal protein L13##NM_014078|MRPL13|28998|mitochondrial ribosomal protein L13##AK311924|MRPL13|28998|mitochondrial ribosomal protein L13##AF028828|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)	0.970709	CTCF.p2:-18:0.971
chr1	103436165	103436305	reg1020091.p1	8.046	+	NM_058170 TSC_hg19_v1_chr1_-_102462791	-973445	-	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	-973748	-	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-1733665	+	AB208844 TSC_hg19_v1_chr1_-_103496798	60548	-	J04177 TSC_hg19_v1_chr1_-_103574032 BC117697	137736	-	NM_001190709 NM_001854 NM_080629 NM_080630 TSC_hg19_v1_chr1_-_103574051	137816	-	NM_058170|OLFM3|118427|olfactomedin 3##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##AB208844|COL11A1|1301|collagen, type XI, alpha 1##J04177|COL11A1|1301|collagen, type XI, alpha 1##BC117697|COL11A1|1301|collagen, type XI, alpha 1##NM_001190709|COL11A1|1301|collagen, type XI, alpha 1##NM_001854|COL11A1|1301|collagen, type XI, alpha 1##NM_080629|COL11A1|1301|collagen, type XI, alpha 1##NM_080630|COL11A1|1301|collagen, type XI, alpha 1	0.999824	CTCF.p2:13:1.000
chr1	32529104	32529245	reg1018481.p1	8.046	+	TSC_hg19_v1_chr1_+_32479463 AK293369 AK091346 AX746925 AK312916 AK303218 BC000717 BC019109 M88108 NM_006559 BC010132 AB590354 DQ895323 U78971	-49676	+	TSC_hg19_v1_chr1_-_32403992 NM_080391	-125177	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	-125243	-	TSC_hg19_v1_chr1_+_32538502 AK023331 NM_018056	9330	+	AL136695 TSC_hg19_v1_chr1_+_32538539 AK001177 BC004364 AK296653 AK298766 AK300293	9400	+	TSC_hg19_v1_chr1_+_32573647 NM_012316 AB621806 AK002111 AK315490 AK128609 BC020520 AF060543	44473	+	AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##AK023331|TMEM39B|55116|transmembrane protein 39B##NM_018056|TMEM39B|55116|transmembrane protein 39B##AL136695|TMEM39B|55116|transmembrane protein 39B##AK001177|TMEM39B|55116|transmembrane protein 39B##BC004364|TMEM39B|55116|transmembrane protein 39B##AK296653|TMEM39B|55116|transmembrane protein 39B##AK298766|TMEM39B|55116|transmembrane protein 39B##AK300293|TMEM39B|55116|transmembrane protein 39B##NM_012316|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AK002111|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AK315490|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AK128609|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##BC020520|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AF060543|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)	0.021684	
chr1	67955469	67955574	reg1017107.p2	8.046	+	TSC_hg19_v1_chr1_-_67896101 NM_001018067 NM_001018068 NM_001018069 NM_015640	-59404	-	BX647139 TSC_hg19_v1_chr1_-_67896097	-59424	-	TSC_hg19_v1_chr1_-_67896086 AK312256	-59436	-	TSC_hg19_v1_chr1_+_68150883 AK314991 NM_001199741 NM_001199742 NM_001924 M60974 BC011757 DQ008445 EF581092 EF614238	195389	+	TSC_hg19_v1_chr1_+_68151094 AB463698 AM393439 DQ893229 DQ896558	195613	+	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	342467	+	NM_001018067|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018068|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018069|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_015640|SERBP1|26135|SERPINE1 mRNA binding protein 1##BX647139|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK312256|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AM393439|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ893229|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ896558|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AK124028|LOC100289178|100289178|uncharacterized LOC100289178	0.311056	CTCF.p2:12:0.311
chr13	47295401	47295518	reg1015820.p2	8.045	+	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-167952	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-168039	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	-168136	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	75856	-	AK314132 BX647777 AK302787 NM_000621 NM_001165947	175608	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1279992	-	HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.098886	
chr16	83147048	83147145	reg1023067.p1	8.045	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-486427	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	-486507	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	-486702	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	694504	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	694560	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	785673	+	AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase	0.179381	
chr7	36358772	36358865	reg1015215.p1	8.045	+	TSC_hg19_v1_chr7_+_36193025 AB051493	-165763	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	-165935	+	TSC_hg19_v1_chr7_+_36192789 NM_030636	-166013	+	TSC_hg19_v1_chr7_-_36406811 BC056191 AB384038 BC136362 BC144032 AB020702 BC110422 NM_001199707 AK293912 AK294686 AK302559 NM_001199706 NM_015314 NM_001199708	47854	-	TSC_hg19_v1_chr7_+_36429470 BC070066 NM_018685 AK299803 AK291254 AF273437	70622	+	BC028678 NM_001100425	70896	-	AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##NM_030636|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC056191|KIAA0895|23366|KIAA0895##BC136362|KIAA0895|23366|KIAA0895##BC144032|KIAA0895|23366|KIAA0895##AB020702|KIAA0895|23366|KIAA0895##BC110422|KIAA0895|23366|KIAA0895##NM_001199707|KIAA0895|23366|KIAA0895##AK293912|KIAA0895|23366|KIAA0895##AK294686|KIAA0895|23366|KIAA0895##AK302559|KIAA0895|23366|KIAA0895##NM_001199706|KIAA0895|23366|KIAA0895##NM_015314|KIAA0895|23366|KIAA0895##NM_001199708|KIAA0895|23366|KIAA0895##BC070066|ANLN|54443|anillin, actin binding protein##NM_018685|ANLN|54443|anillin, actin binding protein##AK299803|ANLN|54443|anillin, actin binding protein##AK291254|ANLN|54443|anillin, actin binding protein##AF273437|ANLN|54443|anillin, actin binding protein##BC028678|KIAA0895|23366|KIAA0895##NM_001100425|KIAA0895|23366|KIAA0895	0.848208	CTCF.p2:13:0.848
chr8	22613892	22614049	reg1003764.p2	8.045	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-63186	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-63465	-	AK294968 AK295834 NM_001199881	-63896	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	171354	-	AK092617 BC034917 NM_001160036	230953	+	NM_001160037	239390	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.399084	CTCF.p2:11:0.399
chr12	121668217	121668318	reg1016725.p1	8.044	+	TSC_hg19_v1_chr12_+_121647948 BC035845 Y07684 BC033826 AB464108 DQ890906 DQ894059 CU689766 AK225604 BT019738 BT019739 AK301080 AF000234	-20265	+	TSC_hg19_v1_chr12_+_121647931 AK293599 AK293660 AK297704 AK308549 AK308868 BC017458	-20375	+	U83993 NM_002560	-20606	+	AF101264 TSC_hg19_v1_chr12_-_121712132 AK024748	43794	-	TSC_hg19_v1_chr12_-_121734513 BC026060 AF140507 AF425668 AK300865	66240	-	TSC_hg19_v1_chr12_-_121734549 NM_172226	66358	-	BC035845|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##Y07684|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC033826|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##DQ890906|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##DQ894059|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK225604|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BT019738|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BT019739|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK301080|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AF000234|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293599|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293660|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK297704|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308549|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308868|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC017458|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##U83993|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##NM_002560|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AF101264|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK024748|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	0.993932	CTCF.p2:-3:0.994
chr8	63814587	63814702	reg1014295.p2	8.044	+	TSC_hg19_v1_chr8_+_63161499 AK096949 NM_173688 AX721226 AB463913	-653080	+	TSC_hg19_v1_chr8_+_63161185 AK299689	-653438	+	TSC_hg19_v1_chr8_-_62627167 NM_001164754 NM_001164755 NM_001164756 NM_004318 NM_032466	-1187455	-	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	136754	-	NM_003878	136965	-	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	183983	-	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_001164754|ASPH|444|aspartate beta-hydroxylase##NM_001164755|ASPH|444|aspartate beta-hydroxylase##NM_001164756|ASPH|444|aspartate beta-hydroxylase##NM_004318|ASPH|444|aspartate beta-hydroxylase##NM_032466|ASPH|444|aspartate beta-hydroxylase##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##NM_003878|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein	0.342789	CTCF.p2:5:0.315
chr9	130846237	130846387	reg1020389.p1	8.044	+	AJ619990 TSC_hg19_v1_chr9_+_130830643	-15693	+	TSC_hg19_v1_chr9_+_130830492 AK290991 NM_001006641	-15829	+	AK122729 NM_197956	-16714	-	NM_001006642 AJ619991	7822	+	BC089448 TSC_hg19_v1_chr9_+_130860793 AK290705	14469	+	NM_052901 TSC_hg19_v1_chr9_+_130860820 BC103930 BC103931 BC103932 BC103933 AJ619989 AJ619992 NM_001006643	14513	+	AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_001006642|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC089448|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AK290705|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_052901|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103930|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103931|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103932|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103933|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619989|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619992|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006643|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	0.792143	CTCF.p2:24:0.792
chr11	67141720	67141842	reg1018725.p1	8.043	+	AK298052 NM_001166212	-134	-	DQ891525 DQ894715 AB528390 AY049779 BC066229 BC066230 BC066231 AF172854 BC012939 AF176911 NM_013246	-675	-	AF179890 BC001334 TSC_hg19_v1_chr11_-_67121006 BC070250 AB209274 NM_021173	-20777	-	TSC_hg19_v1_chr11_+_67159464 BC014848 NM_004584 U53174 AK315348 CR536508	17687	+	NM_001243224	18994	+	BT006629 AB464100 S57501 TSC_hg19_v1_chr11_-_67169297 AK313586 X70848 M63960 BC004482 BC001888	27493	-	AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ891525|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ894715|CLCF1|23529|cardiotrophin-like cytokine factor 1##AY049779|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066229|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066230|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066231|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF172854|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC012939|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF176911|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_013246|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF179890|POLD4|57804|polymerase (DNA-directed), delta 4##BC001334|POLD4|57804|polymerase (DNA-directed), delta 4##BC070250|POLD4|57804|polymerase (DNA-directed), delta 4##AB209274|POLD4|57804|polymerase (DNA-directed), delta 4##NM_021173|POLD4|57804|polymerase (DNA-directed), delta 4##BC014848|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_004584|RAD9A|5883|RAD9 homolog A (S. pombe)##U53174|RAD9A|5883|RAD9 homolog A (S. pombe)##AK315348|RAD9A|5883|RAD9 homolog A (S. pombe)##CR536508|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_001243224|RAD9A|5883|RAD9 homolog A (S. pombe)##BT006629|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##S57501|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##AK313586|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##X70848|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##M63960|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC004482|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC001888|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme	0.102113	
chr1	242183269	242183410	reg1016042.p1	8.042	+	BC132986 BC132988 AF276659 BC127722 NM_001004343	-20965	-	NM_003686 NM_006027 AF042282 AF091740 AF060479 AF084974	-171254	+	BC007491 TSC_hg19_v1_chr1_+_242011556	-171789	+	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	429431	-	AK098092 NM_152666	504658	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	1235017	-	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_003686|EXO1|9156|exonuclease 1##NM_006027|EXO1|9156|exonuclease 1##AF042282|EXO1|9156|exonuclease 1##AF091740|EXO1|9156|exonuclease 1##AF060479|EXO1|9156|exonuclease 1##AF084974|EXO1|9156|exonuclease 1##BC007491|EXO1|9156|exonuclease 1##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa	0.96931	CTCF.p2:-13:0.969
chr17	59079775	59079895	reg1015281.p1	8.042	+	TSC_hg19_v1_chr17_+_58755255 NM_001099432 NM_017679 AK304791 AK225757 BC017390 AK314744 AF361219 BC117275 BC143386 BC143387 AK025510	-324622	+	TSC_hg19_v1_chr17_+_58677710 BC016480 BC042418 BC032826 BC033893 DQ891047 EU176552 BT009780	-402146	+	TSC_hg19_v1_chr17_+_58677553 BC060877 NM_003620 AK312902 AK299773 U78305	-402291	+	TSC_hg19_v1_chr17_+_59477203 BC052566 NM_005994 AK127429 BC070054	397401	+	TSC_hg19_v1_chr17_+_59477477 U28049	397661	+	TSC_hg19_v1_chr17_+_59477713 AL832900 AB209378	397882	+	NM_001099432|BCAS3|54828|breast carcinoma amplified sequence 3##NM_017679|BCAS3|54828|breast carcinoma amplified sequence 3##AK304791|BCAS3|54828|breast carcinoma amplified sequence 3##AK225757|BCAS3|54828|breast carcinoma amplified sequence 3##BC017390|BCAS3|54828|breast carcinoma amplified sequence 3##AK314744|BCAS3|54828|breast carcinoma amplified sequence 3##AF361219|BCAS3|54828|breast carcinoma amplified sequence 3##BC117275|BCAS3|54828|breast carcinoma amplified sequence 3##BC143386|BCAS3|54828|breast carcinoma amplified sequence 3##BC143387|BCAS3|54828|breast carcinoma amplified sequence 3##AK025510|BCAS3|54828|breast carcinoma amplified sequence 3##BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC052566|TBX2|6909|T-box 2##NM_005994|TBX2|6909|T-box 2##BC070054|TBX2|6909|T-box 2##U28049|TBX2|6909|T-box 2##AL832900|TBX2|6909|T-box 2##AB209378|TBX2|6909|T-box 2	0.947355	CTCF.p2:-14:0.947
chr21	46572343	46572477	reg1018594.p1	8.042	+	TSC_hg19_v1_chr21_+_46494502 AY082339 BC030663 NM_001112 NM_001160230 NM_015833 NM_015834 AB194369 AB194370 AB194371 AB194372 AB194373 AF525422 AF533142 AY135659 U76420 U76421 U76422 BC065545 U82120	-77827	+	TSC_hg19_v1_chr21_+_46359968 CU679303	-212441	+	TSC_hg19_v1_chr21_+_46359920 AF391113 AF391114 BC009341 NM_058190	-212485	+	TSC_hg19_v1_chr21_+_46572480 FJ169506	88	+	TSC_hg19_v1_chr21_-_46707808 BC064623 AJ575591 AL110285 AB023175 AJ302079 AJ302080 AY066015 AK294966 AK290732 AK298080 NM_015227 NM_133635	135391	-	TSC_hg19_v1_chr21_+_46707955 BC022830 BC033767	135565	+	AY082339|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC030663|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001112|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001160230|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015833|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015834|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194369|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194370|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194371|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194372|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194373|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF525422|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF533142|ADARB1|104|adenosine deaminase, RNA-specific, B1##AY135659|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76420|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76421|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76422|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC065545|ADARB1|104|adenosine deaminase, RNA-specific, B1##U82120|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF391113|FAM207A|85395|family with sequence similarity 207, member A##AF391114|FAM207A|85395|family with sequence similarity 207, member A##BC009341|FAM207A|85395|family with sequence similarity 207, member A##NM_058190|FAM207A|85395|family with sequence similarity 207, member A##FJ169506|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC064623|POFUT2|23275|protein O-fucosyltransferase 2##AJ575591|POFUT2|23275|protein O-fucosyltransferase 2##AL110285|POFUT2|23275|protein O-fucosyltransferase 2##AB023175|POFUT2|23275|protein O-fucosyltransferase 2##AJ302079|POFUT2|23275|protein O-fucosyltransferase 2##AJ302080|POFUT2|23275|protein O-fucosyltransferase 2##AY066015|POFUT2|23275|protein O-fucosyltransferase 2##AK294966|POFUT2|23275|protein O-fucosyltransferase 2##AK290732|POFUT2|23275|protein O-fucosyltransferase 2##AK298080|POFUT2|23275|protein O-fucosyltransferase 2##NM_015227|POFUT2|23275|protein O-fucosyltransferase 2##NM_133635|POFUT2|23275|protein O-fucosyltransferase 2##BC022830|LOC642852|642852|uncharacterized LOC642852##BC033767|LOC642852|642852|uncharacterized LOC642852	0.0	
chr1	202968504	202968624	reg1017168.p1	8.041	+	AB529197 CU676296 TSC_hg19_v1_chr1_-_202936386 AK075304 AF169481 BC018732 AF087912 AF093822 AF125533 BC000034 AK027319 AK313333 AK074654 AK223416 NM_016243 AY359026	-32194	-	NM_001127687	-40865	-	TSC_hg19_v1_chr1_-_202927466 NM_015999	-41070	-	TSC_hg19_v1_chr1_+_202976501 AK297222	7928	+	AF070537 TSC_hg19_v1_chr1_+_202976519 AK291426 AK312985 AK309745 BC067775	7955	+	TSC_hg19_v1_chr1_+_202976528 BC013073 NM_138391 NM_001079809 BC150647 CU680486 CU688332	7995	+	AK075304|CYB5R1|51706|cytochrome b5 reductase 1##AF169481|CYB5R1|51706|cytochrome b5 reductase 1##BC018732|CYB5R1|51706|cytochrome b5 reductase 1##AF087912|CYB5R1|51706|cytochrome b5 reductase 1##AF093822|CYB5R1|51706|cytochrome b5 reductase 1##AF125533|CYB5R1|51706|cytochrome b5 reductase 1##BC000034|CYB5R1|51706|cytochrome b5 reductase 1##AK313333|CYB5R1|51706|cytochrome b5 reductase 1##AK074654|CYB5R1|51706|cytochrome b5 reductase 1##AK223416|CYB5R1|51706|cytochrome b5 reductase 1##NM_016243|CYB5R1|51706|cytochrome b5 reductase 1##AY359026|CYB5R1|51706|cytochrome b5 reductase 1##NM_001127687|ADIPOR1|51094|adiponectin receptor 1##NM_015999|ADIPOR1|51094|adiponectin receptor 1##AK297222|TMEM183B|653659|transmembrane protein 183B##AF070537|TMEM183A|92703|transmembrane protein 183A##AK291426|TMEM183A|92703|transmembrane protein 183A##AK312985|TMEM183A|92703|transmembrane protein 183A##AK309745|TMEM183A|92703|transmembrane protein 183A##BC067775|TMEM183A|92703|transmembrane protein 183A##BC013073|TMEM183A|92703|transmembrane protein 183A##NM_138391|TMEM183A|92703|transmembrane protein 183A##NM_001079809|TMEM183B|653659|transmembrane protein 183B##BC150647|TMEM183A|92703|transmembrane protein 183A	0.997283	CTCF.p2:3:0.997
chr14	37715697	37715813	reg1016465.p1	8.041	+	TSC_hg19_v1_chr14_+_37667148 BC035870 BX537396 AK291850 BC036523 BC036124 BX647795 AY059470	-48535	+	TSC_hg19_v1_chr14_+_37667116 NM_001195296 NM_001195297 NM_138731	-48637	+	AJ278148 NM_001171170 NM_030631	-73891	-	AB463645 CU689794 AM392863 AM393239 AM393310 AM393369 TSC_hg19_v1_chr14_-_38064234 BC033890	348451	-	TSC_hg19_v1_chr14_-_38064316 AK313785	348561	-	TSC_hg19_v1_chr14_-_38064444 NM_004496	348709	-	BC035870|MIPOL1|145282|mirror-image polydactyly 1##BX537396|MIPOL1|145282|mirror-image polydactyly 1##AK291850|MIPOL1|145282|mirror-image polydactyly 1##BC036523|MIPOL1|145282|mirror-image polydactyly 1##BC036124|MIPOL1|145282|mirror-image polydactyly 1##BX647795|MIPOL1|145282|mirror-image polydactyly 1##AY059470|MIPOL1|145282|mirror-image polydactyly 1##NM_001195296|MIPOL1|145282|mirror-image polydactyly 1##NM_001195297|MIPOL1|145282|mirror-image polydactyly 1##NM_138731|MIPOL1|145282|mirror-image polydactyly 1##AJ278148|SLC25A21|89874|solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21##NM_001171170|SLC25A21|89874|solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21##NM_030631|SLC25A21|89874|solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21##AM392863|FOXA1|3169|forkhead box A1##AM393239|FOXA1|3169|forkhead box A1##AM393310|FOXA1|3169|forkhead box A1##AM393369|FOXA1|3169|forkhead box A1##BC033890|FOXA1|3169|forkhead box A1##AK313785|FOXA1|3169|forkhead box A1##NM_004496|FOXA1|3169|forkhead box A1	0.991353	CTCF.p2:-16:0.991
chr17	18400497	18400624	reg1018655.p1	8.041	+	AK296659 NM_001040078 AK315818 BC073889 BC105943 TSC_hg19_v1_chr17_+_18380141 CU687266	-20428	+	BC036791 NM_001145127 AK298286 BC026998	-119473	+	TSC_hg19_v1_chr17_-_18266810 BC007979 BC022874 BC038598 AK223552 AK298415 AK302834 AF017065 NM_004169 NM_148918	-133776	-	BC101585 BC104815 BC143561 TSC_hg19_v1_chr17_-_18528914 BC062767 BX647826 AK093811 AX748319	128347	-	NM_001039397	147179	-	NM_001145045	185011	-	AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001040078|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##AK315818|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC073889|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##BC036791|EVPLL|645027|envoplakin-like##NM_001145127|EVPLL|645027|envoplakin-like##AK298286|EVPLL|645027|envoplakin-like##BC026998|EVPLL|645027|envoplakin-like##BC007979|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC022874|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC038598|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK223552|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK298415|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK302834|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AF017065|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_004169|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_148918|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC101585|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC104815|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC143561|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC062767|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BX647826|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##AK093811|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##NM_001039397|TBC1D28|254272|TBC1 domain family, member 28##NM_001145045|ZNF286B|729288|zinc finger protein 286B	0.010647	
chr19	6504908	6505028	reg1016221.p2	8.041	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-2651	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-23185	-	NM_139161 NM_174881 AK292956 AF503290 AY358684 BC018409 AK000653	-40684	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	26058	+	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	86064	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	86138	-	EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##NM_139161|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_174881|CRB3|92359|crumbs homolog 3 (Drosophila)##AK292956|CRB3|92359|crumbs homolog 3 (Drosophila)##AF503290|CRB3|92359|crumbs homolog 3 (Drosophila)##AY358684|CRB3|92359|crumbs homolog 3 (Drosophila)##BC018409|CRB3|92359|crumbs homolog 3 (Drosophila)##AK000653|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule	0.839766	CTCF.p2:7:0.619	CTCF.p2:-38:0.221
chr2	48085112	48085243	reg1017158.p2	8.041	+	BC071594 NM_000179 TSC_hg19_v1_chr2_+_48010283 U28946 D89646 BC104665 U54777 BC004246 AK293921 AK308392 AB590153 DQ892898	-74881	+	TSC_hg19_v1_chr2_-_47918421 D28393	-166758	-	AF287302 NM_022055 BC047749	-287694	-	AK304140 AK315108 NM_025133	30674	-	BC130445 BC136480 AK292877 AF176706 AF174599 AK223592 BC043258 AY827075 TSC_hg19_v1_chr2_-_48132864 AK297444 NM_001190274	47616	-	TSC_hg19_v1_chr2_+_48541851 NM_002158 BC063305	456641	+	BC071594|MSH6|2956|mutS homolog 6 (E. coli)##NM_000179|MSH6|2956|mutS homolog 6 (E. coli)##U28946|MSH6|2956|mutS homolog 6 (E. coli)##D89646|MSH6|2956|mutS homolog 6 (E. coli)##BC104665|MSH6|2956|mutS homolog 6 (E. coli)##U54777|MSH6|2956|mutS homolog 6 (E. coli)##BC004246|MSH6|2956|mutS homolog 6 (E. coli)##AK293921|MSH6|2956|mutS homolog 6 (E. coli)##AK308392|MSH6|2956|mutS homolog 6 (E. coli)##DQ892898|MSH6|2956|mutS homolog 6 (E. coli)##D28393|RPL18A|6142|ribosomal protein L18a##AF287302|KCNK12|56660|potassium channel, subfamily K, member 12##NM_022055|KCNK12|56660|potassium channel, subfamily K, member 12##BC047749|KCNK12|56660|potassium channel, subfamily K, member 12##AK304140|FBXO11|80204|F-box protein 11##AK315108|FBXO11|80204|F-box protein 11##NM_025133|FBXO11|80204|F-box protein 11##BC130445|FBXO11|80204|F-box protein 11##BC136480|FBXO11|80204|F-box protein 11##AK292877|FBXO11|80204|F-box protein 11##AF176706|FBXO11|80204|F-box protein 11##AF174599|FBXO11|80204|F-box protein 11##AK223592|FBXO11|80204|F-box protein 11##BC043258|FBXO11|80204|F-box protein 11##AY827075|FBXO11|80204|F-box protein 11##AK297444|FBXO11|80204|F-box protein 11##NM_001190274|FBXO11|80204|F-box protein 11##NM_002158|FOXN2|3344|forkhead box N2##BC063305|FOXN2|3344|forkhead box N2	0.983487	CTCF.p2:-22:0.983
chr5	52211341	52211476	reg1013675.p2	8.041	+	AK025729 BC007650 TSC_hg19_v1_chr5_+_52095991 BC005889 BC007249 AF132951 AK312633 AF139828 BC022789	-115422	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	-127419	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	-1532155	+	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	73712	+	BC046097 AF155659 NM_004531	193897	-	TSC_hg19_v1_chr5_-_52405588 BC029287 AF091871 AF117815 AK312887 NM_176806 BC095417	194188	-	AK025729|PELO|53918|pelota homolog (Drosophila)##BC007650|PELO|53918|pelota homolog (Drosophila)##BC005889|PELO|53918|pelota homolog (Drosophila)##BC007249|PELO|53918|pelota homolog (Drosophila)##AF132951|PELO|53918|pelota homolog (Drosophila)##AK312633|PELO|53918|pelota homolog (Drosophila)##AF139828|PELO|53918|pelota homolog (Drosophila)##BC022789|PELO|53918|pelota homolog (Drosophila)##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1##AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC046097|MOCS2|4338|molybdenum cofactor synthesis 2##AF155659|MOCS2|4338|molybdenum cofactor synthesis 2##NM_004531|MOCS2|4338|molybdenum cofactor synthesis 2##BC029287|MOCS2|4338|molybdenum cofactor synthesis 2##AF091871|MOCS2|4338|molybdenum cofactor synthesis 2##AF117815|MOCS2|4338|molybdenum cofactor synthesis 2##AK312887|MOCS2|4338|molybdenum cofactor synthesis 2##NM_176806|MOCS2|4338|molybdenum cofactor synthesis 2##BC095417|MOCS2|4338|molybdenum cofactor synthesis 2	0.994326	CTCF.p2:11:0.994
chr7	112509362	112509499	reg1019015.p1	8.041	+	AK293311 TSC_hg19_v1_chr7_-_112430447 AK314460 AL136626 AK025482 NM_022484	-78987	-	NM_001134468 BC031976 AK096894 NM_182597	-388444	+	NM_001197079	-417318	+	AL834437 AK299901 TSC_hg19_v1_chr7_-_112579931 BC114615 AK056380 NM_152556	70400	-	AK297464 AK312587 NM_001146266 AL161959 NM_001146267 TSC_hg19_v1_chr7_-_112726667	217065	-	BC030577 TSC_hg19_v1_chr7_-_112727780	218350	-	AK293311|TMEM168|64418|transmembrane protein 168##AK314460|TMEM168|64418|transmembrane protein 168##AL136626|TMEM168|64418|transmembrane protein 168##AK025482|TMEM168|64418|transmembrane protein 168##NM_022484|TMEM168|64418|transmembrane protein 168##NM_001134468|C7orf53|286006|chromosome 7 open reading frame 53##BC031976|C7orf53|286006|chromosome 7 open reading frame 53##AK096894|C7orf53|286006|chromosome 7 open reading frame 53##NM_182597|C7orf53|286006|chromosome 7 open reading frame 53##NM_001197079|IFRD1|3475|interferon-related developmental regulator 1##AL834437|C7orf60|154743|chromosome 7 open reading frame 60##AK299901|C7orf60|154743|chromosome 7 open reading frame 60##BC114615|C7orf60|154743|chromosome 7 open reading frame 60##AK056380|C7orf60|154743|chromosome 7 open reading frame 60##NM_152556|C7orf60|154743|chromosome 7 open reading frame 60##AK297464|GPR85|54329|G protein-coupled receptor 85##AK312587|GPR85|54329|G protein-coupled receptor 85##NM_001146266|GPR85|54329|G protein-coupled receptor 85##AL161959|GPR85|54329|G protein-coupled receptor 85##NM_001146267|GPR85|54329|G protein-coupled receptor 85##BC030577|GPR85|54329|G protein-coupled receptor 85	1.670851	CTCF.p2:1:0.975	CTCF.p2:-25:0.696
chr2	71212115	71212243	reg1017532.p2	8.040	+	BC035234 NM_001115116 NM_024933	-6605	+	AK291121 NM_001692 BC063411 AK313194 AK301542 BC035978 M25809 AK223151 CU687698 CU690248	-49137	+	TSC_hg19_v1_chr2_+_71127738 BC006336 AB527952 BT007035	-84441	+	BC010656 AK074840 TSC_hg19_v1_chr2_-_71219046	6852	-	AK315543 TSC_hg19_v1_chr2_-_71221930	9703	-	BC128461 BC128462 TSC_hg19_v1_chr2_-_71221953	9773	-	BC035234|ANKRD53|79998|ankyrin repeat domain 53##NM_001115116|ANKRD53|79998|ankyrin repeat domain 53##NM_024933|ANKRD53|79998|ankyrin repeat domain 53##AK291121|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##NM_001692|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC063411|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK313194|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK301542|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC035978|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##M25809|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK223151|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC006336|VAX2|25806|ventral anterior homeobox 2##BT007035|VAX2|25806|ventral anterior homeobox 2##BC010656|TEX261|113419|testis expressed 261##AK074840|TEX261|113419|testis expressed 261##AK315543|TEX261|113419|testis expressed 261##BC128461|TEX261|113419|testis expressed 261##BC128462|TEX261|113419|testis expressed 261	0.980972	CTCF.p2:-13:0.981
chr5	178017759	178017899	reg1016841.p1	8.040	+	AY158895 AY898961 NM_173465	-274	-	TSC_hg19_v1_chr5_-_177659803 NM_153373	-358011	-	TSC_hg19_v1_chr5_-_177659788 BC039012 BC028002 BC067745 AK292061 BC037567 BC008009 BC088800 BC037238 BC110335	-358055	-	BC136261 BC143538 BC143547 TSC_hg19_v1_chr5_-_178054030 CR749504 BC065732 AK310427 BC063116 AK294921 BC015942 NM_020666 AK304614 AK311485	36200	-	TSC_hg19_v1_chr5_-_178054072 AK308879 AK309215 BC151233 AK308578	36251	-	TSC_hg19_v1_chr5_-_178054103 AK308674	36294	-	AY158895|COL23A1|91522|collagen, type XXIII, alpha 1##AY898961|COL23A1|91522|collagen, type XXIII, alpha 1##NM_173465|COL23A1|91522|collagen, type XXIII, alpha 1##NM_153373|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC039012|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC028002|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC067745|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AK292061|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC037567|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC008009|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC088800|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC037238|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC110335|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC136261|CLK4|57396|CDC-like kinase 4##BC143538|CLK4|57396|CDC-like kinase 4##BC143547|CLK4|57396|CDC-like kinase 4##CR749504|CLK4|57396|CDC-like kinase 4##BC065732|CLK4|57396|CDC-like kinase 4##AK310427|CLK4|57396|CDC-like kinase 4##BC063116|CLK4|57396|CDC-like kinase 4##BC015942|CLK4|57396|CDC-like kinase 4##NM_020666|CLK4|57396|CDC-like kinase 4##AK304614|CLK4|57396|CDC-like kinase 4##AK311485|CLK4|57396|CDC-like kinase 4##AK308879|CLK4|57396|CDC-like kinase 4##BC151233|CLK4|57396|CDC-like kinase 4##AK308674|CLK4|57396|CDC-like kinase 4	0.0	
chr11	120983383	120983501	reg1016919.p2	8.039	+	NM_005422	-10068	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	-88632	+	AB384776 NM_014619 S67803	-452415	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	179963	+	TSC_hg19_v1_chr11_+_121163484 AK096847 AK223141 AK222686	180040	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	180112	+	NM_005422|TECTA|7007|tectorin alpha##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK096847|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK223141|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK222686|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.38198	CTCF.p2:16:0.382
chr1	118438244	118438384	reg1017903.p1	8.038	+	TSC_hg19_v1_chr1_+_118148669 AK000209 BC036516 BC131726	-289635	+	TSC_hg19_v1_chr1_+_118148542 NM_017709	-289728	+	TSC_hg19_v1_chr1_+_117910083 BC052954 AK307842 NM_006699 BC063300	-528221	+	TSC_hg19_v1_chr1_-_118472186 BC013132	33868	-	AK000149 BC013324 TSC_hg19_v1_chr1_-_118472244 NM_001135589 NM_017686	33939	-	BC058836 TSC_hg19_v1_chr1_+_118472357	34039	+	AK000209|FAM46C|54855|family with sequence similarity 46, member C##BC036516|FAM46C|54855|family with sequence similarity 46, member C##BC131726|FAM46C|54855|family with sequence similarity 46, member C##NM_017709|FAM46C|54855|family with sequence similarity 46, member C##BC052954|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##AK307842|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##NM_006699|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC063300|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC013132|GDAP2|54834|ganglioside induced differentiation associated protein 2##AK000149|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC013324|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_001135589|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_017686|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC058836|WDR3|10885|WD repeat domain 3	0.999347	CTCF.p2:19:0.999
chrX	68028729	68028843	reg1017780.p4	8.038	+	TSC_hg19_v1_chrX_+_67913490 D80011	-115295	+	TSC_hg19_v1_chrX_+_67913480 AK291747 NM_001142504	-115306	+	BC035587 NM_001142503 NM_014725 CR749411	-161227	+	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	20069	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	356520	-	AF087142 NM_015686 BC136518 BC136519	696297	+	D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK291747|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142504|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##BC035587|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142503|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_014725|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##CR749411|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B	0.0	
chr11	5312621	5312738	reg1016406.p2	8.037	+	NM_005330	-21307	-	AF110493 X55656 DQ892665 DQ895909 M15386 BC130457 BC130459 AK290492 BC010914 BC020719 NM_000184 BC029387	-36707	-	DQ892801 DQ896048 NM_000559 BC010913	-41618	-	BC100919 BC069094 BC148186 BC153815 NM_033179	10495	-	HQ258158 BC117461 NM_033180	32876	-	AB463972 NM_001004750	60058	+	NM_005330|HBE1|3046|hemoglobin, epsilon 1##AF110493|HBG2|3048|hemoglobin, gamma G##X55656|HBG2|3048|hemoglobin, gamma G##DQ892665|HBG1|3047|hemoglobin, gamma A##DQ895909|HBG2|3048|hemoglobin, gamma G##M15386|HBG2|3048|hemoglobin, gamma G##BC130457|HBG2|3048|hemoglobin, gamma G##BC130459|HBG2|3048|hemoglobin, gamma G##AK290492|HBG2|3048|hemoglobin, gamma G##BC010914|HBG1|3047|hemoglobin, gamma A##BC020719|HBG1|3047|hemoglobin, gamma A##NM_000184|HBG2|3048|hemoglobin, gamma G##BC029387|HBG2|3048|hemoglobin, gamma G##DQ892801|HBG1|3047|hemoglobin, gamma A##DQ896048|HBG1|3047|hemoglobin, gamma A##NM_000559|HBG1|3047|hemoglobin, gamma A##BC010913|HBG1|3047|hemoglobin, gamma A##BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##HQ258158|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2##BC117461|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2##NM_033180|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2##NM_001004750|OR51B6|390058|olfactory receptor, family 51, subfamily B, member 6	0.992435	CTCF.p2:-6:0.992
chr8	103598098	103598205	reg1016592.p1	8.037	+	NM_024410 AK315276 BC104456 BC104457	-34290	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-173240	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-346978	-	BC011538 NM_001032282 S81439	67941	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	69781	-	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	278208	-	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1	0.992085	CTCF.p2:24:0.992
chr9	98823630	98823762	reg1019385.p1	8.037	+	TSC_hg19_v1_chr9_-_98638262 AF194971 AL389954	-185373	-	NM_001010895 TSC_hg19_v1_chr9_+_98637942 AK129624 AK308409 AL389953	-185755	+	TSC_hg19_v1_chr9_-_98637839 AK092137 AX747374	-185843	-	BT019371 CR541894 CU689848 DQ891812 DQ894995 BC034281 NM_000197 U05659	240713	-	TSC_hg19_v1_chr9_-_99145966 HQ258608 AB106537 AB122077 AK307890 BC100278	322235	-	NM_007001 TSC_hg19_v1_chr9_-_99145994 BC113579	322324	-	AF194971|LINC00476|100128782|long intergenic non-protein coding RNA 476##AL389954|LINC00476|100128782|long intergenic non-protein coding RNA 476##NM_001010895|C9orf102|375748|chromosome 9 open reading frame 102##AK308409|C9orf102|375748|chromosome 9 open reading frame 102##AL389953|C9orf102|375748|chromosome 9 open reading frame 102##AK092137|LINC00476|100128782|long intergenic non-protein coding RNA 476##BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##HQ258608|SLC35D2|11046|solute carrier family 35, member D2##AB106537|SLC35D2|11046|solute carrier family 35, member D2##AB122077|SLC35D2|11046|solute carrier family 35, member D2##AK307890|SLC35D2|11046|solute carrier family 35, member D2##BC100278|SLC35D2|11046|solute carrier family 35, member D2##NM_007001|SLC35D2|11046|solute carrier family 35, member D2##BC113579|SLC35D2|11046|solute carrier family 35, member D2	0.562346	CTCF.p2:15:0.562
chrX	18918097	18918195	reg1015396.p2	8.037	+	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	-209102	+	AB464151 AF014459 DQ426892 NM_000330	-227942	-	BC036091 NM_001037343	-457803	+	TSC_hg19_v1_chrX_-_19002476 NM_000292	84316	-	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	222521	-	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	443936	+	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1##BC036091|CDKL5|6792|cyclin-dependent kinase-like 5##NM_001037343|CDKL5|6792|cyclin-dependent kinase-like 5##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1	0.55947	CTCF.p2:0:0.559
chr16	67481649	67481755	reg1017332.p2	8.036	+	TSC_hg19_v1_chr16_+_67465023 U26726 BC036780 BC064536 NM_000196 U14631	-16672	+	TSC_hg19_v1_chr16_-_67450360 NM_013304 U90653 BC021908	-31405	-	TSC_hg19_v1_chr16_-_67427402 AF132972 AF078846 BC000691 NM_015964 NM_016140	-54323	-	CU679153 DQ893270 DQ896601 X71490 TSC_hg19_v1_chr16_-_67515051 AK300570 AK313035 AK125522 BC008861 NM_004691	33342	-	NM_001138 U88063	36013	-	TSC_hg19_v1_chr16_+_67562734 NM_024519 AK127792 NM_001193522 AK307467 BC012730	81039	+	U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_013304|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U90653|ZDHHC1|29800|zinc finger, DHHC-type containing 1##BC021908|ZDHHC1|29800|zinc finger, DHHC-type containing 1##AF132972|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AF078846|TPPP3|51673|tubulin polymerization-promoting protein family member 3##BC000691|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_015964|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_016140|TPPP3|51673|tubulin polymerization-promoting protein family member 3##DQ893270|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##DQ896601|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##X71490|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK300570|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK313035|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK125522|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##BC008861|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_004691|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_001138|AGRP|181|agouti related protein homolog (mouse)##U88063|AGRP|181|agouti related protein homolog (mouse)##NM_024519|FAM65A|79567|family with sequence similarity 65, member A##AK127792|FAM65A|79567|family with sequence similarity 65, member A##NM_001193522|FAM65A|79567|family with sequence similarity 65, member A##AK307467|FAM65A|79567|family with sequence similarity 65, member A	0.998699	CTCF.p2:-9:0.999
chr1	67230822	67230956	reg1015636.p1	8.036	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	-12724	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	-12765	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	-231005	+	BC101646 BC101648 AF133816 AY359030 NM_005478	36046	-	TSC_hg19_v1_chr1_-_67390540 BC032406 HQ258529 AK292830 BC126379 BC126381 AK091603 BX648840 NM_024763 NM_207014	159640	-	AK302061 NM_001077700 NM_001077702 NM_001077703 NM_001146110 NM_001146111 NM_001146112 NM_001146113 NM_020948 TSC_hg19_v1_chr1_+_67390672 AL831987 AF515447 AF515448 AY124186 AY124187 AY124189 AY124190 AY124192 AY124193 BC066898 AK307717 BC108726 CR627441 AB590466	159770	+	BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##BC101646|INSL5|10022|insulin-like 5##BC101648|INSL5|10022|insulin-like 5##AF133816|INSL5|10022|insulin-like 5##AY359030|INSL5|10022|insulin-like 5##NM_005478|INSL5|10022|insulin-like 5##BC032406|WDR78|79819|WD repeat domain 78##HQ258529|WDR78|79819|WD repeat domain 78##AK292830|WDR78|79819|WD repeat domain 78##BC126379|WDR78|79819|WD repeat domain 78##BC126381|WDR78|79819|WD repeat domain 78##AK091603|WDR78|79819|WD repeat domain 78##BX648840|WDR78|79819|WD repeat domain 78##NM_024763|WDR78|79819|WD repeat domain 78##NM_207014|WDR78|79819|WD repeat domain 78##AK302061|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077700|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077702|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077703|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001146110|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001146111|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001146112|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001146113|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_020948|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AL831987|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AF515447|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AF515448|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124186|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124187|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124189|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124190|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124192|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124193|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##BC066898|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AK307717|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##BC108726|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##CR627441|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)	0.457117	CTCF.p2:-20:0.457
chr17	61072827	61072929	reg1015986.p1	8.036	+	AK122947 AK093076 AX747906 BX648705 NM_152598	-187201	-	NM_001100875 BC035021	-188867	-	TSC_hg19_v1_chr17_+_60705060 BC150212 AF107292 AB384513	-367771	+	NM_025185	14019	+	BC144357 TSC_hg19_v1_chr17_+_61271368	198483	+	BC091485 NM_001017917	445312	-	AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_001100875|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC035021|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC150212|MRC2|9902|mannose receptor, C type 2##AF107292|MRC2|9902|mannose receptor, C type 2##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##BC091485|CYB561|1534|cytochrome b-561##NM_001017917|CYB561|1534|cytochrome b-561	0.987879	CTCF.p2:0:0.988
chr4	96087216	96087348	reg1016662.p1	8.036	+	TSC_hg19_v1_chr4_+_95679109 NM_001203 U89326	-408176	+	BC026029 AM393306 AM393394 AM393485 AM393621 AM393813 DQ890686 DQ893868 AB587372 CU676108 CU679071 AY598328 BT007328 TSC_hg19_v1_chr4_+_95376500	-710832	+	TSC_hg19_v1_chr4_+_95373092 BC017902 BC008741 AK291898 AK291624 AK304125 AK296980 AL832157 AL832686 AF061258 AL833151 AL833438	-714186	+	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	382897	-	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	383094	-	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	673976	+	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB##U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB##BC026029|PDLIM5|10611|PDZ and LIM domain 5##AM393306|PDLIM5|10611|PDZ and LIM domain 5##AM393394|PDLIM5|10611|PDZ and LIM domain 5##AM393485|PDLIM5|10611|PDZ and LIM domain 5##AM393621|PDLIM5|10611|PDZ and LIM domain 5##AM393813|PDLIM5|10611|PDZ and LIM domain 5##DQ890686|PDLIM5|10611|PDZ and LIM domain 5##DQ893868|PDLIM5|10611|PDZ and LIM domain 5##AY598328|PDLIM5|10611|PDZ and LIM domain 5##BT007328|PDLIM5|10611|PDZ and LIM domain 5##BC017902|PDLIM5|10611|PDZ and LIM domain 5##BC008741|PDLIM5|10611|PDZ and LIM domain 5##AK291898|PDLIM5|10611|PDZ and LIM domain 5##AK291624|PDLIM5|10611|PDZ and LIM domain 5##AK304125|PDLIM5|10611|PDZ and LIM domain 5##AK296980|PDLIM5|10611|PDZ and LIM domain 5##AL832157|PDLIM5|10611|PDZ and LIM domain 5##AL832686|PDLIM5|10611|PDZ and LIM domain 5##AF061258|PDLIM5|10611|PDZ and LIM domain 5##AL833151|PDLIM5|10611|PDZ and LIM domain 5##AL833438|PDLIM5|10611|PDZ and LIM domain 5##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2	0.997899	CTCF.p2:-11:0.998
chr9	140404473	140404593	reg1017375.p1	8.036	+	AY255128 AY255129 AY255130 AY255131 AY255132 NM_001130969 NM_001130970 NM_001130971 NM_001178064 NM_015537 TSC_hg19_v1_chr9_-_140353787	-50731	-	TSC_hg19_v1_chr9_-_140353758 AK074602 BC072412	-50773	-	TSC_hg19_v1_chr9_-_140353612 BC110498	-50901	-	AK125060 AK126267 TSC_hg19_v1_chr9_-_140444881 NM_001098537 NM_152286	40377	-	NM_032477 TSC_hg19_v1_chr9_+_140446353 BC040035 AY232291	41826	+	CU675946 TSC_hg19_v1_chr9_-_140473350 AK307180 BC003123 BC016349 BC017335	68757	-	AY255128|NELF|26012|nasal embryonic LHRH factor##AY255129|NELF|26012|nasal embryonic LHRH factor##AY255130|NELF|26012|nasal embryonic LHRH factor##AY255131|NELF|26012|nasal embryonic LHRH factor##AY255132|NELF|26012|nasal embryonic LHRH factor##NM_001130969|NELF|26012|nasal embryonic LHRH factor##NM_001130970|NELF|26012|nasal embryonic LHRH factor##NM_001130971|NELF|26012|nasal embryonic LHRH factor##NM_001178064|NELF|26012|nasal embryonic LHRH factor##NM_015537|NELF|26012|nasal embryonic LHRH factor##AK074602|NELF|26012|nasal embryonic LHRH factor##BC072412|NELF|26012|nasal embryonic LHRH factor##BC110498|NELF|26012|nasal embryonic LHRH factor##AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7##AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_032477|MRPL41|64975|mitochondrial ribosomal protein L41##BC040035|MRPL41|64975|mitochondrial ribosomal protein L41##AY232291|MRPL41|64975|mitochondrial ribosomal protein L41##AK307180|WDR85|92715|WD repeat domain 85##BC003123|WDR85|92715|WD repeat domain 85##BC016349|WDR85|92715|WD repeat domain 85##BC017335|WDR85|92715|WD repeat domain 85	0.830069	CTCF.p2:-13:0.830
chr22	50765467	50765615	reg1016198.p2	8.035	+	AK054743 AK022407 BC031069 NM_001001794	-95	-	NM_012401	-19541	-	TSC_hg19_v1_chr22_-_50720982 AK056543	-44566	-	TSC_hg19_v1_chr22_+_50781755 NM_001242898 NM_001242899 NM_001242900 NM_014678 BC032664 BC006568 BC052995	16202	+	AB014585 TSC_hg19_v1_chr22_+_50781776 BC041698 AK302472	16262	+	BC046169 TSC_hg19_v1_chr22_-_50893787 BC056915	128225	-	AK054743|FAM116B|414918|family with sequence similarity 116, member B##BC031069|FAM116B|414918|family with sequence similarity 116, member B##NM_001001794|FAM116B|414918|family with sequence similarity 116, member B##NM_012401|PLXNB2|23654|plexin B2##AK056543|PLXNB2|23654|plexin B2##NM_001242898|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242899|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242900|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_014678|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC032664|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC006568|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC052995|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##AB014585|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC041698|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##AK302472|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC046169|SBF1|6305|SET binding factor 1##BC056915|SBF1|6305|SET binding factor 1	0.146591	
chr3	164924637	164924738	reg1015154.p1	8.035	+	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	-10182	-	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	-128409	-	NM_001080440	-3710092	+	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	630506	-	NM_000055 TSC_hg19_v1_chr3_-_165555283	630580	-	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	2173390	-	BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001080440|OTOL1|131149|otolin 1##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##NM_000055|BCHE|590|butyrylcholinesterase##AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing	0.340496	CTCF.p2:-4:0.319
chr5	43040514	43040643	reg1016121.p2	8.035	+	AB463523 BC067873 AY032883 NM_001014279	-282	-	TSC_hg19_v1_chr5_-_42993436 AK056817	-47132	-	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	-228587	-	AK307963 TSC_hg19_v1_chr5_+_43121018 BC045109	80423	+	TSC_hg19_v1_chr5_+_43121609 AK299315 AK307977	81036	+	AK057343 NM_003432 TSC_hg19_v1_chr5_+_43121669 AK310735 BC017923	81106	+	BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39##AK056817|FLJ32255|643977|uncharacterized LOC643977##Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK307963|ZNF131|7690|zinc finger protein 131##AK299315|ZNF131|7690|zinc finger protein 131##AK307977|ZNF131|7690|zinc finger protein 131##AK057343|ZNF131|7690|zinc finger protein 131##NM_003432|ZNF131|7690|zinc finger protein 131##AK310735|ZNF131|7690|zinc finger protein 131##BC017923|ZNF131|7690|zinc finger protein 131	0.149972	
chr14	70724376	70724505	reg1016787.p2	8.033	+	BC036783 BX248763 TSC_hg19_v1_chr14_-_70655669 AF510501 AF510502 AF510503 NM_033262 NM_058240 NM_182932 NM_183002	-68753	-	AK096553 AJ745101 AJ745102 BC114217 NM_182936 AK122728 BC142969 NM_001130417	-177548	-	NM_001034852 NM_022137 TSC_hg19_v1_chr14_+_70346132 AK289988 AK313063 AJ249900 BC011548 BC008608	-378311	+	CR457199 AB528661 CU674840 BC001702 TSC_hg19_v1_chr14_-_70826389	101906	-	AF151037 AK290743 TSC_hg19_v1_chr14_-_70826395 AX810696 FJ460510 FJ460511 NM_001204090 NM_016468	101980	-	AB527912 TSC_hg19_v1_chr14_-_70883770 BC007704 AK002133 AK311719 NM_001202547 NM_001202548 NM_001202549 NM_018373	159316	-	BC036783|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BX248763|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510501|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510502|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510503|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_033262|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_058240|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182932|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_183002|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AK096553|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745101|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745102|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC114217|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182936|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AK122728|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC142969|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_001130417|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_001034852|SMOC1|64093|SPARC related modular calcium binding 1##NM_022137|SMOC1|64093|SPARC related modular calcium binding 1##AK289988|SMOC1|64093|SPARC related modular calcium binding 1##AK313063|SMOC1|64093|SPARC related modular calcium binding 1##AJ249900|SMOC1|64093|SPARC related modular calcium binding 1##BC011548|SMOC1|64093|SPARC related modular calcium binding 1##BC008608|SMOC1|64093|SPARC related modular calcium binding 1##CR457199|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC001702|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##AF151037|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK290743|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##FJ460510|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##FJ460511|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_001204090|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_016468|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC007704|SYNJ2BP|55333|synaptojanin 2 binding protein##AK002133|SYNJ2BP|55333|synaptojanin 2 binding protein##AK311719|SYNJ2BP|55333|synaptojanin 2 binding protein##NM_001202547|SYNJ2BP-COX16|100529257|SYNJ2BP-COX16 readthrough##NM_001202548|SYNJ2BP-COX16|100529257|SYNJ2BP-COX16 readthrough##NM_001202549|SYNJ2BP-COX16|100529257|SYNJ2BP-COX16 readthrough##NM_018373|SYNJ2BP|55333|synaptojanin 2 binding protein	0.0	
chr15	98964941	98965063	reg1014763.p1	8.033	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	-461051	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	-461083	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	-1638330	+	AK097062 AK097062 NM_182562	92608	-	TSC_hg19_v1_chr15_+_99191767 AB425196	226969	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	227754	+	BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor	0.999674	CTCF.p2:20:1.000
chr17	12246085	12246205	reg1015860.p2	8.033	+	TSC_hg19_v1_chr17_+_11924150 BC036032 NM_003010 BC060764 AK131544 AK313053 U17743 AK294923 L36870 BC050386 AB590846 BT019676 CR536564	-321964	+	AK092656 AX747657 NM_144680 TSC_hg19_v1_chr17_-_11900782 AY491053 AK127908	-345392	-	NM_004662 X99947	-459925	+	NM_001146312 NM_153604 TSC_hg19_v1_chr17_+_12569210 AY764180	323064	+	AK128608 TSC_hg19_v1_chr17_+_12569334 AK292885	323176	+	TSC_hg19_v1_chr17_+_12569389 BC126307 BC143391 AF532596	323289	+	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4##NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4##U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4##L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4##CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK092656|ZNF18|7566|zinc finger protein 18##NM_144680|ZNF18|7566|zinc finger protein 18##AY491053|ZNF18|7566|zinc finger protein 18##AK127908|ZNF18|7566|zinc finger protein 18##NM_004662|DNAH9|1770|dynein, axonemal, heavy chain 9##X99947|DNAH9|1770|dynein, axonemal, heavy chain 9##NM_001146312|MYOCD|93649|myocardin##NM_153604|MYOCD|93649|myocardin##AY764180|MYOCD|93649|myocardin##AK128608|MYOCD|93649|myocardin##AK292885|MYOCD|93649|myocardin##BC126307|MYOCD|93649|myocardin##BC143391|MYOCD|93649|myocardin##AF532596|MYOCD|93649|myocardin	0.999247	CTCF.p2:-9:0.999
chr2	241638683	241638780	reg1015327.p2	8.033	+	AB040748 BC041460 NM_198998	-7470	+	BC157895 BC171912 BC139748 NM_001102467 BC041460	-16416	-	AK314002 NM_005301	-74070	+	BC064906 TSC_hg19_v1_chr2_-_241759637 AK307119 AB621817 AB210029 AB290172 NM_001244008 NM_004321	120944	-	NM_000030 X53414 BC132819 D13368 S71388 AK315331 TSC_hg19_v1_chr2_+_241808251 AK292754 AK298420 AB292648 X56092 AF348451 AK298400 AK316495	169537	+	BC125154 BC125155 AK026324 NM_024861 AK096434	192688	-	AB040748|AQP12A|375318|aquaporin 12A##BC041460|AQP12B|653437|aquaporin 12B##NM_198998|AQP12A|375318|aquaporin 12A##BC157895|AQP12B|653437|aquaporin 12B##BC171912|AQP12B|653437|aquaporin 12B##BC139748|AQP12B|653437|aquaporin 12B##NM_001102467|AQP12B|653437|aquaporin 12B##BC041460|AQP12B|653437|aquaporin 12B##AK314002|GPR35|2859|G protein-coupled receptor 35##NM_005301|GPR35|2859|G protein-coupled receptor 35##BC064906|KIF1A|547|kinesin family member 1A##AK307119|KIF1A|547|kinesin family member 1A##AB210029|KIF1A|547|kinesin family member 1A##AB290172|KIF1A|547|kinesin family member 1A##NM_001244008|KIF1A|547|kinesin family member 1A##NM_004321|KIF1A|547|kinesin family member 1A##NM_000030|AGXT|189|alanine-glyoxylate aminotransferase##X53414|AGXT|189|alanine-glyoxylate aminotransferase##BC132819|AGXT|189|alanine-glyoxylate aminotransferase##D13368|AGXT|189|alanine-glyoxylate aminotransferase##AK315331|AGXT|189|alanine-glyoxylate aminotransferase##AK292754|AGXT|189|alanine-glyoxylate aminotransferase##AK298420|AGXT|189|alanine-glyoxylate aminotransferase##AB292648|AGXT|189|alanine-glyoxylate aminotransferase##X56092|AGXT|189|alanine-glyoxylate aminotransferase##AF348451|AGXT|189|alanine-glyoxylate aminotransferase##AK298400|AGXT|189|alanine-glyoxylate aminotransferase##AK316495|AGXT|189|alanine-glyoxylate aminotransferase##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54	0.900599	CTCF.p2:3:0.901
chr7	139119435	139119548	reg1016898.p2	8.033	+	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-74477	+	TSC_hg19_v1_chr7_+_139044701 AK022895 BC056886	-74765	+	TSC_hg19_v1_chr7_+_139044699 AK001476	-74793	+	BC110858 BC104963 BC104965 AK126174 NM_198508	48941	-	NM_001080511	89182	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	358414	-	EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AK022895|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##BC056886|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AK001476|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2	0.229448	CTCF.p2:1:0.229
chr10	81052902	81053013	reg1015495.p2	8.032	+	TSC_hg19_v1_chr10_+_81003207 AB033050	-49827	+	TSC_hg19_v1_chr10_+_80899458 AK025812	-153473	+	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	-224169	+	AK299728 TSC_hg19_v1_chr10_+_81065901	12931	+	TSC_hg19_v1_chr10_+_81070578 BC025342 BC068072	17687	+	AL049432 TSC_hg19_v1_chr10_+_81073775 AK023603	20882	+	AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK299728|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC025342|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC068072|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AL049432|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK023603|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.39332	CTCF.p2:-10:0.393
chr9	108663890	108664008	reg1015099.p1	8.032	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-207031	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	-207096	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	-239192	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	961415	+	TSC_hg19_v1_chr9_+_109686439 CR749850	1022520	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	1381583	+	AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##CR749850|ZNF462|58499|zinc finger protein 462##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.585284	CTCF.p2:-8:0.546
chrX	56810060	56810218	reg1017402.p1	8.032	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-54448	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-220088	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-551229	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	211832	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	337789	-	BC071694 NM_019003	353918	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.447169	CTCF.p2:28:0.447
chr11	22897562	22897718	reg1016280.p1	8.031	+	NM_001195637	-15669	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-46295	-	TSC_hg19_v1_chr11_+_22696382 CU680566 AB590780 CR450285	-201242	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	1621009	+	NM_031418 AK302659	3456090	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	3696100	-	NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##CR450285|GAS2|2620|growth arrest-specific 2##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated	1.984221	CTCF.p2:25:0.987	CTCF.p2:-58:0.997
chr1	160189470	160189619	reg1018060.p1	8.031	+	TSC_hg19_v1_chr1_+_160175173 AK311762 AK095879 X86809 BC002426 Y13736	-14347	+	TSC_hg19_v1_chr1_+_160175124 NM_003768 BC022554	-14415	+	NM_001231 AK300713 AK313250 BC022289 S73775	-29198	+	BC111063 BC013107 TSC_hg19_v1_chr1_-_160232242 AK026481 AK312690 CR749801	42684	-	TSC_hg19_v1_chr1_-_160232278 AK303188	42732	-	TSC_hg19_v1_chr1_-_160232340 NM_015726	42793	-	AK311762|PEA15|8682|phosphoprotein enriched in astrocytes 15##AK095879|PEA15|8682|phosphoprotein enriched in astrocytes 15##X86809|PEA15|8682|phosphoprotein enriched in astrocytes 15##BC002426|PEA15|8682|phosphoprotein enriched in astrocytes 15##Y13736|PEA15|8682|phosphoprotein enriched in astrocytes 15##NM_003768|PEA15|8682|phosphoprotein enriched in astrocytes 15##BC022554|PEA15|8682|phosphoprotein enriched in astrocytes 15##NM_001231|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##AK300713|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##AK313250|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##BC022289|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##S73775|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##BC111063|DCAF8|50717|DDB1 and CUL4 associated factor 8##BC013107|DCAF8|50717|DDB1 and CUL4 associated factor 8##AK026481|DCAF8|50717|DDB1 and CUL4 associated factor 8##AK312690|DCAF8|50717|DDB1 and CUL4 associated factor 8##CR749801|DCAF8|50717|DDB1 and CUL4 associated factor 8##AK303188|DCAF8|50717|DDB1 and CUL4 associated factor 8##NM_015726|DCAF8|50717|DDB1 and CUL4 associated factor 8	0.892316	CTCF.p2:17:0.892
chr1	29839917	29840057	reg1020237.p1	8.031	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-276939	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-282540	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-282607	-	TSC_hg19_v1_chr1_+_31191648 AK057725	1351644	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	1356445	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	1390645	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	0.620816	CTCF.p2:-7:0.621
chr3	81388345	81388483	reg1019404.p1	8.031	+	NM_002941	-1571356	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-2319827	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-2721429	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	422283	-	TSC_hg19_v1_chr3_-_81810798 AK312245	422384	-	TSC_hg19_v1_chr3_-_81810802 AK297939	422391	-	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.047934	
chr1	111372712	111372856	reg1018849.p1	8.030	+	TSC_hg19_v1_chr1_-_111217626 BC035059 NM_002232	-155144	-	TSC_hg19_v1_chr1_-_111217553 AK314009	-155240	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	-155432	-	NM_001040033 BC035456	41045	+	NM_000560 TSC_hg19_v1_chr1_+_111415769 AK313582 AK298723	42971	+	BC040693 TSC_hg19_v1_chr1_+_111415791 M37033 M60871	43018	+	BC035059|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##NM_002232|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##NM_001040033|CD53|963|CD53 molecule##BC035456|CD53|963|CD53 molecule##NM_000560|CD53|963|CD53 molecule##AK313582|CD53|963|CD53 molecule##AK298723|CD53|963|CD53 molecule##BC040693|CD53|963|CD53 molecule##M37033|CD53|963|CD53 molecule##M60871|CD53|963|CD53 molecule	0.995938	CTCF.p2:5:0.996
chr15	82787482	82787611	reg1017387.p1	8.030	+	NM_198181 CR936812	-65330	+	TSC_hg19_v1_chr15_+_82647308 BC066934	-140215	+	NM_001164465	-145841	-	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	37347	-	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	157246	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	157344	+	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like	0.999886	CTCF.p2:9:1.000
chr20	62612274	62612394	reg1017943.p1	8.030	+	TSC_hg19_v1_chr20_-_62611342 BC041436	-991	-	TSC_hg19_v1_chr20_-_62610996 BC067362 NM_080621	-1340	-	TSC_hg19_v1_chr20_-_62601275 BC125129 BC125128 NM_020713	-11061	-	TSC_hg19_v1_chr20_+_62612424 NM_012469	88	+	TSC_hg19_v1_chr20_+_62612487 AK225993 AK001554	143	+	AF221842 TSC_hg19_v1_chr20_+_62612506 AF026031 AK314310 AB019219 BC001666	197	+	BC041436|SAMD10|140700|sterile alpha motif domain containing 10##BC067362|SAMD10|140700|sterile alpha motif domain containing 10##NM_080621|SAMD10|140700|sterile alpha motif domain containing 10##BC125129|ZNF512B|57473|zinc finger protein 512B##BC125128|ZNF512B|57473|zinc finger protein 512B##NM_020713|ZNF512B|57473|zinc finger protein 512B##NM_012469|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK225993|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK001554|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF221842|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF026031|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK314310|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AB019219|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##BC001666|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)	0.436923	CTCF.p2:-5:0.378
chr6	117290486	117290597	reg1018696.p1	8.030	+	BC039248 NM_173560	-92166	+	AF502962 NM_148963 AY435125 AY435126 AY435127	-140334	-	TSC_hg19_v1_chr6_-_117086883 BC038997 NM_001085480	-203680	-	AY056583 NM_153453 TSC_hg19_v1_chr6_+_117586720 AJ578053 NM_182645 BC100798 BC100799 BC118545 BC118622 BC069316 AK096878	296270	+	M34353 NM_002944 TSC_hg19_v1_chr6_-_117747031	456490	-	TSC_hg19_v1_chr6_+_117803805 BC035671 NM_173674 AK095973	513296	+	BC039248|RFX6|222546|regulatory factor X, 6##NM_173560|RFX6|222546|regulatory factor X, 6##AF502962|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##NM_148963|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435125|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435126|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435127|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##BC038997|FAM162B|221303|family with sequence similarity 162, member B##NM_001085480|FAM162B|221303|family with sequence similarity 162, member B##AY056583|VGLL2|245806|vestigial like 2 (Drosophila)##NM_153453|VGLL2|245806|vestigial like 2 (Drosophila)##AJ578053|VGLL2|245806|vestigial like 2 (Drosophila)##NM_182645|VGLL2|245806|vestigial like 2 (Drosophila)##BC100798|VGLL2|245806|vestigial like 2 (Drosophila)##BC100799|VGLL2|245806|vestigial like 2 (Drosophila)##BC118545|VGLL2|245806|vestigial like 2 (Drosophila)##BC118622|VGLL2|245806|vestigial like 2 (Drosophila)##BC069316|VGLL2|245806|vestigial like 2 (Drosophila)##AK096878|VGLL2|245806|vestigial like 2 (Drosophila)##M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##BC035671|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##NM_173674|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AK095973|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1	0.154284	
chr1	59755962	59756080	reg1016666.p2	8.029	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-506286	-	TSC_hg19_v1_chr1_-_59248287 BC009874	-507656	-	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-590269	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	6591	+	NM_001244714 AK054842	19732	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	524631	+	BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##BC009874|JUN|3725|jun proto-oncogene##BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)	0.0	
chr21	37312722	37312857	reg1018184.p1	8.029	+	AK310646 TSC_hg19_v1_chr21_-_36421641 D43969	-891154	-	TSC_hg19_v1_chr21_-_36421598 NM_001754	-891186	-	TSC_hg19_v1_chr21_-_36421585 AK310587 D89788 D89789 D89790	-891208	-	AK095215 BC002898 TSC_hg19_v1_chr21_-_37432613 AB004853 NM_001007259 AF391112 AK001660	119831	-	BC036556 TSC_hg19_v1_chr21_-_37432809 AK300009 NM_017438	120027	-	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	129464	+	D43969|RUNX1|861|runt-related transcription factor 1##NM_001754|RUNX1|861|runt-related transcription factor 1##AK310587|RUNX1|861|runt-related transcription factor 1##D89788|RUNX1|861|runt-related transcription factor 1##D89789|RUNX1|861|runt-related transcription factor 1##D89790|RUNX1|861|runt-related transcription factor 1##AK095215|SETD4|54093|SET domain containing 4##BC002898|SETD4|54093|SET domain containing 4##AB004853|SETD4|54093|SET domain containing 4##NM_001007259|SETD4|54093|SET domain containing 4##AF391112|SETD4|54093|SET domain containing 4##AK001660|SETD4|54093|SET domain containing 4##BC036556|SETD4|54093|SET domain containing 4##AK300009|SETD4|54093|SET domain containing 4##NM_017438|SETD4|54093|SET domain containing 4##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1	0.014887	
chrX	129464740	129464871	reg1018410.p1	8.029	+	TSC_hg19_v1_chrX_-_129402874 AK000102 AL834333 AL133204 AK290373 BC051728 NM_017666	-61959	-	TSC_hg19_v1_chrX_+_129305943 BC001157 BC001704 BC009996 NM_004794 AF498959 BT007038 AK094927	-158956	+	BC111065 TSC_hg19_v1_chrX_-_129299819 NM_001130847 NM_004208 NM_145812 NM_145813	-164974	-	TSC_hg19_v1_chrX_+_129473927 AK304649 AK297499 AK309433 AK296155 NM_003951 NM_022810 BC119666 BC119667 AF155809 AF155810 AF155811 AY358099	9227	+	AY288416 BC101166 BC101167 BC101168 AB529244 HQ258187 BC095502 BC126179 BC126181 NM_178471	54660	-	TSC_hg19_v1_chrX_+_129535955 BC003676 NM_016024 AK292855 BC105582 BC012345 AL050405 BC033750 BC063517 BC010036 BC040433 BC050707	71148	+	AK000102|ZNF280C|55609|zinc finger protein 280C##AL834333|ZNF280C|55609|zinc finger protein 280C##AL133204|ZNF280C|55609|zinc finger protein 280C##AK290373|ZNF280C|55609|zinc finger protein 280C##BC051728|ZNF280C|55609|zinc finger protein 280C##NM_017666|ZNF280C|55609|zinc finger protein 280C##BC001157|RAB33A|9363|RAB33A, member RAS oncogene family##BC001704|RAB33A|9363|RAB33A, member RAS oncogene family##BC009996|RAB33A|9363|RAB33A, member RAS oncogene family##NM_004794|RAB33A|9363|RAB33A, member RAS oncogene family##AF498959|RAB33A|9363|RAB33A, member RAS oncogene family##BT007038|RAB33A|9363|RAB33A, member RAS oncogene family##AK094927|RAB33A|9363|RAB33A, member RAS oncogene family##BC111065|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_001130847|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_004208|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_145812|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_145813|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AK297499|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AK309433|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AK296155|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##NM_003951|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##NM_022810|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##BC119666|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##BC119667|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155809|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155810|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155811|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AY358099|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AY288416|GPR119|139760|G protein-coupled receptor 119##BC101166|GPR119|139760|G protein-coupled receptor 119##BC101167|GPR119|139760|G protein-coupled receptor 119##BC101168|GPR119|139760|G protein-coupled receptor 119##HQ258187|GPR119|139760|G protein-coupled receptor 119##BC095502|GPR119|139760|G protein-coupled receptor 119##BC126179|GPR119|139760|G protein-coupled receptor 119##BC126181|GPR119|139760|G protein-coupled receptor 119##NM_178471|GPR119|139760|G protein-coupled receptor 119##BC003676|RBMX2|51634|RNA binding motif protein, X-linked 2##NM_016024|RBMX2|51634|RNA binding motif protein, X-linked 2##AK292855|RBMX2|51634|RNA binding motif protein, X-linked 2##BC105582|RBMX2|51634|RNA binding motif protein, X-linked 2##BC012345|RBMX2|51634|RNA binding motif protein, X-linked 2##AL050405|RBMX2|51634|RNA binding motif protein, X-linked 2##BC033750|RBMX2|51634|RNA binding motif protein, X-linked 2##BC063517|RBMX2|51634|RNA binding motif protein, X-linked 2##BC010036|RBMX2|51634|RNA binding motif protein, X-linked 2##BC040433|RBMX2|51634|RNA binding motif protein, X-linked 2##BC050707|RBMX2|51634|RNA binding motif protein, X-linked 2	0.1325	
chr1	219590080	219590195	reg1017138.p1	8.028	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-242895	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-242979	+	M19154 TSC_hg19_v1_chr1_+_218519634	-1070532	+	BC036078 TSC_hg19_v1_chr1_-_220101540	511392	-	AB464233 TSC_hg19_v1_chr1_-_220101784	511654	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	511828	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.995046	CTCF.p2:17:0.995
chr17	7944809	7944910	reg1015487.p1	8.027	+	AK298095 NM_001039130 NM_001039131 NM_001141 AK292779 AK300554 BC063647 U78294 BC035217 BC033294 AB590334 DQ891345 EU176579 AF468051 AF468052 AF468053 AF468054	-2447	+	DQ426876 NM_000180 M92432	-38908	+	NM_001037144 NM_053051 AY160226 AY160227 TSC_hg19_v1_chr17_+_7835522 AK293076 AF331638 BC021134 AL833907	-109330	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	15343	+	TSC_hg19_v1_chr17_+_7982776 AK096086 BC046191	37916	+	AF038461 NM_001139	46161	-	AK298095|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039130|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039131|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001141|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK292779|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK300554|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC063647|ALOX15B|247|arachidonate 15-lipoxygenase, type B##U78294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC035217|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC033294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##DQ891345|ALOX15B|247|arachidonate 15-lipoxygenase, type B##EU176579|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468051|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468052|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468053|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468054|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_000180|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##M92432|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##NM_001037144|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##NM_053051|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160226|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160227|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AK293076|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AF331638|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##BC021134|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AL833907|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AF038461|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##NM_001139|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type	0.996152	CTCF.p2:16:0.864
chr4	113686891	113687030	reg1013867.p1	8.027	+	NM_015454 TSC_hg19_v1_chr4_+_113558677	-128292	+	TSC_hg19_v1_chr4_-_113558120 AK302613 AK299831 NM_018392	-128825	-	NM_016648	-128841	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	52341	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	283874	+	TSC_hg19_v1_chr4_+_114214102 AK294720	527159	+	NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7##AK302613|C4orf21|55345|chromosome 4 open reading frame 21##AK299831|C4orf21|55345|chromosome 4 open reading frame 21##NM_018392|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK294720|ANK2|287|ankyrin 2, neuronal	0.979562	CTCF.p2:-2:0.980
chr11	123942187	123942315	reg1015838.p2	8.026	+	AB529276 NM_001004463	-32544	-	BC136917 BC136920 NM_001004464	-41939	+	NM_001001953	-48532	+	TSC_hg19_v1_chr11_+_123986156 AY366503 AY366504 AY366505 AY366506 AY366507 AY366508 NM_001130142 NM_014622 NM_198315 BC001234 AK291698 AK295247	43883	+	BC136638 BC136639 NM_001007249	153119	+	AB463982 NM_001002905	178171	+	NM_001004463|OR10G7|390265|olfactory receptor, family 10, subfamily G, member 7##BC136917|OR10G8|219869|olfactory receptor, family 10, subfamily G, member 8##BC136920|OR10G8|219869|olfactory receptor, family 10, subfamily G, member 8##NM_001004464|OR10G8|219869|olfactory receptor, family 10, subfamily G, member 8##NM_001001953|OR10G9|219870|olfactory receptor, family 10, subfamily G, member 9##AY366503|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366504|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366505|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366506|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366507|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366508|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_001130142|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_014622|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_198315|VWA5A|4013|von Willebrand factor A domain containing 5A##BC001234|VWA5A|4013|von Willebrand factor A domain containing 5A##AK291698|VWA5A|4013|von Willebrand factor A domain containing 5A##AK295247|VWA5A|4013|von Willebrand factor A domain containing 5A##BC136638|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2##BC136639|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2##NM_001007249|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2##NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1	0.998819	CTCF.p2:-9:0.999
chr11	58726118	58726235	reg1017142.p2	8.026	+	AK091965 AX747281 DQ084381 NM_001220496 NM_080661 AK055818	-15424	+	NM_001220494 AK300479 BC008353	-31039	+	BC021682 NM_145016 BC016789	-114188	-	TSC_hg19_v1_chr11_+_58874641 BC062456 NM_001142703 NM_001142704 NM_198947 BC005998 AK304258 AY457926 AK303520	148486	+	TSC_hg19_v1_chr11_-_58910222 AK124475 BC028022	184067	-	TSC_hg19_v1_chr11_+_58910331 AK092237 AX747422 NM_001142519 NM_001142520 NM_001142521	184134	+	AK091965|GLYATL1|92292|glycine-N-acyltransferase-like 1##DQ084381|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220496|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_080661|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK055818|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC062456|FAM111B|374393|family with sequence similarity 111, member B##NM_001142703|FAM111B|374393|family with sequence similarity 111, member B##NM_001142704|FAM111B|374393|family with sequence similarity 111, member B##NM_198947|FAM111B|374393|family with sequence similarity 111, member B##BC005998|FAM111B|374393|family with sequence similarity 111, member B##AK304258|FAM111B|374393|family with sequence similarity 111, member B##AY457926|FAM111B|374393|family with sequence similarity 111, member B##AK303520|FAM111B|374393|family with sequence similarity 111, member B##AK092237|FAM111A|63901|family with sequence similarity 111, member A##NM_001142519|FAM111A|63901|family with sequence similarity 111, member A##NM_001142520|FAM111A|63901|family with sequence similarity 111, member A##NM_001142521|FAM111A|63901|family with sequence similarity 111, member A	0.997044	CTCF.p2:0:0.997
chr6_mann_hap4	4573269	4573394	reg1019210.p1	8.026	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.915682	CTCF.p2:-1:0.916
chr3	11420943	11421124	reg1002750.p2	8.025	+	AK314504 TSC_hg19_v1_chr3_+_11314092 BC000091 AF094516	-106937	+	AK298833 TSC_hg19_v1_chr3_+_11314082 AK075221 AK303694	-106956	+	TSC_hg19_v1_chr3_+_11314033 NM_001136031 NM_001144912 NM_006395	-107027	+	TSC_hg19_v1_chr3_-_11610264 AK308761 NM_001128221	189297	-	AK307708 TSC_hg19_v1_chr3_-_11623831 NM_001128220	202800	-	TSC_hg19_v1_chr3_-_11685397 NM_001128219	264363	-	AK314504|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##BC000091|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AF094516|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK298833|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK075221|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK303694|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_001136031|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_001144912|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_006395|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK308761|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128221|VGLL4|9686|vestigial like 4 (Drosophila)##AK307708|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)	0.0	
chr3	118131500	118131628	reg1016236.p1	8.025	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-1967191	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-1967233	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-2789145	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	621969	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	622119	-	AK097667 NM_152538 AK292387	733333	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.0	
chr8	93081555	93081686	reg1019082.p1	8.025	+	D43638 NM_004349	-6430	-	TSC_hg19_v1_chr8_-_93074863 S82690	-6721	-	D14289 NM_175636	-51735	-	BC005850 BC067078 AK057707 TSC_hg19_v1_chr8_-_93107459 NM_001198629 NM_001198630 NM_001198632 NM_175635	25845	-	AK312592 TSC_hg19_v1_chr8_-_93107711 AK297616	26057	-	NM_001198625 NM_001198626 NM_001198627 NM_001198631 NM_001198634 NM_001198679	26261	-	D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##BC005850|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##BC067078|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##AK057707|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198629|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198630|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198632|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_175635|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##AK312592|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##AK297616|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	0.874682	CTCF.p2:-5:0.875
chr10	118935560	118935694	reg1018140.p1	8.024	+	AK127095 NM_001112704 NM_199131	-37816	-	NM_001127211 NM_018330 TSC_hg19_v1_chr10_-_118765131 AK091381 AX746947	-170515	-	TSC_hg19_v1_chr10_-_118764901 AK095703	-170803	-	AB087138 AB464053 NM_181840	21372	+	NM_003054 BC030593 TSC_hg19_v1_chr10_+_119000626 AK314997 L23205 L09118 X71354 L14269 BC108927 BC108928	65023	+	CU688476 TSC_hg19_v1_chr10_-_119134939 BC012186 BC028375 NM_173791 AK091746 AX747159 BC033019	199254	-	AK127095|VAX1|11023|ventral anterior homeobox 1##NM_001112704|VAX1|11023|ventral anterior homeobox 1##NM_199131|VAX1|11023|ventral anterior homeobox 1##NM_001127211|KIAA1598|57698|KIAA1598##NM_018330|KIAA1598|57698|KIAA1598##AK091381|KIAA1598|57698|KIAA1598##AK095703|KIAA1598|57698|KIAA1598##AB087138|KCNK18|338567|potassium channel, subfamily K, member 18##NM_181840|KCNK18|338567|potassium channel, subfamily K, member 18##NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC012186|PDZD8|118987|PDZ domain containing 8##BC028375|PDZD8|118987|PDZ domain containing 8##NM_173791|PDZD8|118987|PDZ domain containing 8##AK091746|PDZD8|118987|PDZ domain containing 8##BC033019|PDZD8|118987|PDZ domain containing 8	0.994577	CTCF.p2:14:0.995
chr12	126018126	126018228	reg1014769.p1	8.024	+	NM_052907	-207016	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-468109	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-468236	+	NM_001136103	2733770	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	3290266	-	BC043528 TSC_hg19_v1_chr12_+_129337985	3319807	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.9162	CTCF.p2:0:0.916
chrX	53118567	53118667	reg1016881.p1	8.024	+	TSC_hg19_v1_chrX_+_53111548 NM_022117 AK131220 AK292462 AY040871 AF273046 BC024270 AL713652 AB463325 AM392716 AF254794	-6975	+	BC009861 NM_018969	-40112	+	BC067819 NM_001242489 NM_001242490 NM_001242492 NM_001242493 NM_001242494 NM_001242495 NM_001242496 NM_001242497 NM_014138	-93971	-	TSC_hg19_v1_chrX_+_53123332 EF565109	4789	+	BC054499 BC047751 TSC_hg19_v1_chrX_-_53254393 AK308077 AK304732	135770	-	L25270 NM_001146702 NM_004187 TSC_hg19_v1_chrX_-_53254729	136049	-	NM_022117|TSPYL2|64061|TSPY-like 2##AK131220|TSPYL2|64061|TSPY-like 2##AK292462|TSPYL2|64061|TSPY-like 2##AY040871|TSPYL2|64061|TSPY-like 2##AF273046|TSPYL2|64061|TSPY-like 2##BC024270|TSPYL2|64061|TSPY-like 2##AL713652|TSPYL2|64061|TSPY-like 2##AM392716|TSPYL2|64061|TSPY-like 2##AF254794|TSPYL2|64061|TSPY-like 2##BC009861|GPR173|54328|G protein-coupled receptor 173##NM_018969|GPR173|54328|G protein-coupled receptor 173##BC067819|FAM156A|29057|family with sequence similarity 156, member A##NM_001242489|FAM156A|29057|family with sequence similarity 156, member A##NM_001242490|FAM156A|29057|family with sequence similarity 156, member A##NM_001242492|FAM156A|29057|family with sequence similarity 156, member A##NM_001242493|FAM156A|29057|family with sequence similarity 156, member A##NM_001242494|FAM156A|29057|family with sequence similarity 156, member A##NM_001242495|FAM156A|29057|family with sequence similarity 156, member A##NM_001242496|FAM156A|29057|family with sequence similarity 156, member A##NM_001242497|FAM156A|29057|family with sequence similarity 156, member A##NM_014138|FAM156A|29057|family with sequence similarity 156, member A##EF565109|LOC100132984|100132984|uncharacterized LOC100132984##BC054499|KDM5C|8242|lysine (K)-specific demethylase 5C##BC047751|KDM5C|8242|lysine (K)-specific demethylase 5C##AK308077|KDM5C|8242|lysine (K)-specific demethylase 5C##AK304732|KDM5C|8242|lysine (K)-specific demethylase 5C##L25270|KDM5C|8242|lysine (K)-specific demethylase 5C##NM_001146702|KDM5C|8242|lysine (K)-specific demethylase 5C##NM_004187|KDM5C|8242|lysine (K)-specific demethylase 5C	0.99111	CTCF.p2:-1:0.991
chr1	46347338	46347467	reg1014087.p1	8.023	+	TSC_hg19_v1_chr1_+_46269283 AB047005 NM_015112 BC065499	-78104	+	BC032544 TSC_hg19_v1_chr1_-_46216325 AK023880 NM_001145349 NM_005897	-131003	-	NM_016486 TSC_hg19_v1_chr1_+_46153865 AK024682 AK308613 BC104636 BC064539 BC013608 AF151063 BC034147 BC046130 BC121117 BC133692	-193527	+	TSC_hg19_v1_chr1_+_46379267 AK027123 AK309510	31860	+	TSC_hg19_v1_chr1_-_46598298 CR749649 BC021622 NM_003629 EU832448 EU832531 BX537388 BC094768 AK313726 NM_001114172	251076	-	NM_005727 AK313774	293351	+	AB047005|MAST2|23139|microtubule associated serine/threonine kinase 2##NM_015112|MAST2|23139|microtubule associated serine/threonine kinase 2##BC065499|MAST2|23139|microtubule associated serine/threonine kinase 2##BC032544|IPP|3652|intracisternal A particle-promoted polypeptide##AK023880|IPP|3652|intracisternal A particle-promoted polypeptide##NM_001145349|IPP|3652|intracisternal A particle-promoted polypeptide##NM_005897|IPP|3652|intracisternal A particle-promoted polypeptide##NM_016486|TMEM69|51249|transmembrane protein 69##AK024682|TMEM69|51249|transmembrane protein 69##BC104636|TMEM69|51249|transmembrane protein 69##BC064539|TMEM69|51249|transmembrane protein 69##BC013608|TMEM69|51249|transmembrane protein 69##AF151063|TMEM69|51249|transmembrane protein 69##BC034147|TMEM69|51249|transmembrane protein 69##BC046130|TMEM69|51249|transmembrane protein 69##BC121117|TMEM69|51249|transmembrane protein 69##BC133692|TMEM69|51249|transmembrane protein 69##AK027123|MAST2|23139|microtubule associated serine/threonine kinase 2##AK309510|MAST2|23139|microtubule associated serine/threonine kinase 2##CR749649|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BC021622|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_003629|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##EU832448|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##EU832531|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BX537388|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BC094768|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##AK313726|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_001114172|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_005727|TSPAN1|10103|tetraspanin 1##AK313774|TSPAN1|10103|tetraspanin 1	0.986058	CTCF.p2:55:0.986
chr1	83963394	83963515	reg1017388.p1	8.023	+	AF104266 AF104938 AF104939 NM_012302	-1697373	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	-2191527	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-4491027	-	AK097722 TSC_hg19_v1_chr1_-_84326308	362814	-	TSC_hg19_v1_chr1_-_84326677 BC036594	363222	-	AK126792 BC048970 BC032829 TSC_hg19_v1_chr1_-_84464848 BC060878 BC028350 NM_024686	501342	-	AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	0.024925	
chr5	138677380	138677509	reg1016529.p2	8.022	+	TSC_hg19_v1_chr5_+_138629669 AK057645 AB018266	-47769	+	TSC_hg19_v1_chr5_+_138629428 BX537365 AK316420 CR749210 NM_001194955 NM_001194956 AK299399	-47985	+	TSC_hg19_v1_chr5_+_138629336 NM_018834	-48105	+	TSC_hg19_v1_chr5_+_138677542 NM_016480 AK314672	86	+	AK024552 TSC_hg19_v1_chr5_+_138677555 AL136640 BC001716 AF151052	113	+	TSC_hg19_v1_chr5_+_138677571 BC007764 AF317675	149	+	AK057645|MATR3|9782|matrin 3##AB018266|MATR3|9782|matrin 3##BX537365|MATR3|9782|matrin 3##AK316420|MATR3|9782|matrin 3##CR749210|MATR3|9782|matrin 3##NM_001194955|MATR3|9782|matrin 3##NM_001194956|MATR3|9782|matrin 3##AK299399|MATR3|9782|matrin 3##NM_018834|MATR3|9782|matrin 3##NM_016480|PAIP2|51247|poly(A) binding protein interacting protein 2##AK314672|PAIP2|51247|poly(A) binding protein interacting protein 2##AK024552|PAIP2|51247|poly(A) binding protein interacting protein 2##AL136640|PAIP2|51247|poly(A) binding protein interacting protein 2##BC001716|PAIP2|51247|poly(A) binding protein interacting protein 2##AF151052|PAIP2|51247|poly(A) binding protein interacting protein 2##AF317675|PAIP2|51247|poly(A) binding protein interacting protein 2	0.073243	
chr3	97758295	97758440	reg1003116.p1	8.019	+	CR749263 NM_001105580	-4220	-	TSC_hg19_v1_chr3_-_97691261 NM_001042533 NM_032778 AK027299 DQ453796 AB083192 NM_153182	-67090	-	TSC_hg19_v1_chr3_+_97540854 AK296966	-217497	+	AB528856 NM_054106	47649	+	AB528772 NM_001005338	93173	+	BC136984 NM_001005514	109832	+	CR749263|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3##NM_001105580|GABRR3|200959|gamma-aminobutyric acid (GABA) receptor, rho 3##NM_001042533|MINA|84864|MYC induced nuclear antigen##NM_032778|MINA|84864|MYC induced nuclear antigen##AK027299|MINA|84864|MYC induced nuclear antigen##DQ453796|MINA|84864|MYC induced nuclear antigen##AB083192|MINA|84864|MYC induced nuclear antigen##NM_153182|MINA|84864|MYC induced nuclear antigen##AK296966|CRYBG3|131544|beta-gamma crystallin domain containing 3##NM_054106|OR5AC2|81050|olfactory receptor, family 5, subfamily AC, member 2##NM_001005338|OR5H1|26341|olfactory receptor, family 5, subfamily H, member 1##BC136984|OR5H14|403273|olfactory receptor, family 5, subfamily H, member 14##NM_001005514|OR5H14|403273|olfactory receptor, family 5, subfamily H, member 14	0.854662	CTCF.p2:-27:0.855
chr7	92090961	92091105	reg1016501.p2	8.019	+	AB587458 TSC_hg19_v1_chr7_+_92077172	-13917	+	TSC_hg19_v1_chr7_+_92076806 AK315788 AK026142 BC031091	-14193	+	TSC_hg19_v1_chr7_+_92076769 NM_021167 BC019350	-14257	+	AB052090 AB052091 AB052092 AB052093 AB052094 DQ890921 AK292955 AF030356 AK293757 AK295686 BC035575 TSC_hg19_v1_chr7_-_92157811 AF026086 NM_000466	66763	-	BC104865 BC104867 BC143576 NM_032120 CR933641 BC044570 AL136619 BC020919 BC033561 CR936726 AK294626 AK294812 AF161422 BC065716 CR533549	67073	+	TSC_hg19_v1_chr7_-_92219660 BC032461 BC157872	128609	-	AK315788|GATAD1|57798|GATA zinc finger domain containing 1##AK026142|GATAD1|57798|GATA zinc finger domain containing 1##BC031091|GATAD1|57798|GATA zinc finger domain containing 1##NM_021167|GATAD1|57798|GATA zinc finger domain containing 1##BC019350|GATAD1|57798|GATA zinc finger domain containing 1##AB052090|PEX1|5189|peroxisomal biogenesis factor 1##AB052091|PEX1|5189|peroxisomal biogenesis factor 1##AB052092|PEX1|5189|peroxisomal biogenesis factor 1##AB052093|PEX1|5189|peroxisomal biogenesis factor 1##AB052094|PEX1|5189|peroxisomal biogenesis factor 1##DQ890921|PEX1|5189|peroxisomal biogenesis factor 1##AK292955|PEX1|5189|peroxisomal biogenesis factor 1##AF030356|PEX1|5189|peroxisomal biogenesis factor 1##AK293757|PEX1|5189|peroxisomal biogenesis factor 1##AK295686|PEX1|5189|peroxisomal biogenesis factor 1##BC035575|PEX1|5189|peroxisomal biogenesis factor 1##AF026086|PEX1|5189|peroxisomal biogenesis factor 1##NM_000466|PEX1|5189|peroxisomal biogenesis factor 1##BC104865|RBM48|84060|RNA binding motif protein 48##BC104867|RBM48|84060|RNA binding motif protein 48##BC143576|RBM48|84060|RNA binding motif protein 48##NM_032120|RBM48|84060|RNA binding motif protein 48##CR933641|RBM48|84060|RNA binding motif protein 48##BC044570|RBM48|84060|RNA binding motif protein 48##AL136619|RBM48|84060|RNA binding motif protein 48##BC020919|RBM48|84060|RNA binding motif protein 48##BC033561|RBM48|84060|RNA binding motif protein 48##CR936726|RBM48|84060|RNA binding motif protein 48##AK294626|RBM48|84060|RNA binding motif protein 48##AK294812|RBM48|84060|RNA binding motif protein 48##AF161422|RBM48|84060|RNA binding motif protein 48##BC065716|RBM48|84060|RNA binding motif protein 48##CR533549|RBM48|84060|RNA binding motif protein 48##BC032461|FAM133B|257415|family with sequence similarity 133, member B##BC157872|FAM133B|257415|family with sequence similarity 133, member B	0.410115	CTCF.p2:-5:0.410
chr4	159177001	159177144	reg1020177.p1	8.018	+	BC036551 BC048117 BC054487 TSC_hg19_v1_chr4_+_159131677 BC060875 BC035811 BC026318	-45398	+	NM_018342	-45672	+	AY358785 AK172805 BC043193 NM_001031700 NM_001128424	-82890	-	NM_001253727 NM_001253728 NM_001253729 NM_001253730 NM_001253732 NM_001253733 NM_021634 BX647985 BX647975 BX647980 AK307889 AK300379 AK312470 TSC_hg19_v1_chr4_+_159443033 AK295040 BC113617 BC143557 BC143558 BC143559 BC112142 BC143556 AK294694 AB208943 AF190500 AY899848 AY899849 AY899850 HQ258496	265924	+	TSC_hg19_v1_chr4_-_159593035 AK027539 BC065017 BC094775 NM_001008393	416018	-	TSC_hg19_v1_chr4_+_159593447 AK314803 NM_004453 BC011890 AK311435 BX538129 AK304838 S69232 EU093082 EU093083	416322	+	BC036551|TMEM144|55314|transmembrane protein 144##BC048117|TMEM144|55314|transmembrane protein 144##BC054487|TMEM144|55314|transmembrane protein 144##BC060875|TMEM144|55314|transmembrane protein 144##BC035811|TMEM144|55314|transmembrane protein 144##BC026318|TMEM144|55314|transmembrane protein 144##NM_018342|TMEM144|55314|transmembrane protein 144##AY358785|FAM198B|51313|family with sequence similarity 198, member B##AK172805|FAM198B|51313|family with sequence similarity 198, member B##BC043193|FAM198B|51313|family with sequence similarity 198, member B##NM_001031700|FAM198B|51313|family with sequence similarity 198, member B##NM_001128424|FAM198B|51313|family with sequence similarity 198, member B##NM_001253727|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253728|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253729|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253730|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253732|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253733|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_021634|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647985|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647975|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647980|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK307889|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK300379|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK312470|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK295040|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC113617|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143557|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143558|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143559|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC112142|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143556|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK294694|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AB208943|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AF190500|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899848|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899849|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899850|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##HQ258496|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK027539|C4orf46|201725|chromosome 4 open reading frame 46##BC065017|C4orf46|201725|chromosome 4 open reading frame 46##BC094775|C4orf46|201725|chromosome 4 open reading frame 46##NM_001008393|C4orf46|201725|chromosome 4 open reading frame 46##AK314803|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##NM_004453|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BC011890|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BX538129|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##AK304838|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##S69232|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093082|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093083|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase	0.909669	CTCF.p2:-1:0.910
chr5	88025538	88025676	reg1017981.p1	8.018	+	TSC_hg19_v1_chr5_-_87980643 AK125167	-44900	-	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	-56462	-	BC047059 TSC_hg19_v1_chr5_+_87564842	-460758	+	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	94066	-	TSC_hg19_v1_chr5_-_88179002 AK312472 L08895 AK307883 BC026341	153399	-	TSC_hg19_v1_chr5_-_88179279 NM_001193350 NM_002397	153678	-	AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##BC047059|LOC100505894|100505894|uncharacterized LOC100505894##EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C##AK312472|MEF2C|4208|myocyte enhancer factor 2C##L08895|MEF2C|4208|myocyte enhancer factor 2C##AK307883|MEF2C|4208|myocyte enhancer factor 2C##BC026341|MEF2C|4208|myocyte enhancer factor 2C##NM_001193350|MEF2C|4208|myocyte enhancer factor 2C##NM_002397|MEF2C|4208|myocyte enhancer factor 2C	0.997311	CTCF.p2:-6:0.997
chr6	133089457	133089577	reg1004420.p2	8.018	+	AK292125 NM_078488 TSC_hg19_v1_chr6_-_133084603	-4922	-	BC064641 AB435062 AB435063 AB435064 AB435065 NM_001242350 HQ258282 HQ258449 AB026705 AJ132100 D89974 NM_004665 AK290908 AK298719 BC126145 BC126147 BC144064	-10516	-	U39664 BC096268 AJ132099 BC096265 BC096266 BC096267 TSC_hg19_v1_chr6_-_133035195 AK290425 AK314265 NM_004666	-54329	-	AK124442 BC069570 AK293853 TSC_hg19_v1_chr6_-_133119740 NM_052831 AK289918	30184	-	TSC_hg19_v1_chr6_+_133135707 AK096147 NM_001016 D28378 X53505	46190	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	46202	+	AK292125|VNN2|8875|vanin 2##NM_078488|VNN2|8875|vanin 2##BC064641|VNN2|8875|vanin 2##AB435062|VNN2|8875|vanin 2##AB435063|VNN2|8875|vanin 2##AB435064|VNN2|8875|vanin 2##AB435065|VNN2|8875|vanin 2##NM_001242350|VNN2|8875|vanin 2##HQ258282|VNN2|8875|vanin 2##HQ258449|VNN2|8875|vanin 2##AB026705|VNN2|8875|vanin 2##AJ132100|VNN2|8875|vanin 2##D89974|VNN2|8875|vanin 2##NM_004665|VNN2|8875|vanin 2##AK290908|VNN2|8875|vanin 2##AK298719|VNN2|8875|vanin 2##BC126145|VNN2|8875|vanin 2##BC126147|VNN2|8875|vanin 2##BC144064|VNN2|8875|vanin 2##U39664|VNN1|8876|vanin 1##BC096268|VNN1|8876|vanin 1##AJ132099|VNN1|8876|vanin 1##BC096265|VNN1|8876|vanin 1##BC096266|VNN1|8876|vanin 1##BC096267|VNN1|8876|vanin 1##AK290425|VNN1|8876|vanin 1##AK314265|VNN1|8876|vanin 1##NM_004666|VNN1|8876|vanin 1##AK124442|C6orf192|116843|chromosome 6 open reading frame 192##BC069570|C6orf192|116843|chromosome 6 open reading frame 192##AK293853|C6orf192|116843|chromosome 6 open reading frame 192##NM_052831|C6orf192|116843|chromosome 6 open reading frame 192##AK289918|C6orf192|116843|chromosome 6 open reading frame 192##AK096147|SNORA33|594839|small nucleolar RNA, H/ACA box 33##NM_001016|RPS12|6206|ribosomal protein S12##D28378|RPS12|6206|ribosomal protein S12##X53505|RPS12|6206|ribosomal protein S12##AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12	0.883166	CTCF.p2:8:0.883
chrX	53342281	53342411	reg1019265.p1	8.018	+	TSC_hg19_v1_chrX_-_53310765 BC038213 BC108674 FJ154891 FJ154890 AK095232 NM_001243197 NM_015075	-31547	-	L25270 NM_001146702 NM_004187 TSC_hg19_v1_chrX_-_53254729	-87680	-	BC054499 BC047751 TSC_hg19_v1_chrX_-_53254393 AK308077 AK304732	-87959	-	AB011094 NM_001111125 TSC_hg19_v1_chrX_-_53350549	8203	-	BX640922 TSC_hg19_v1_chrX_-_53449153	106797	-	D80000 AB385291 HQ258690 AF176781 S78271 TSC_hg19_v1_chrX_-_53449604 BC046147 AK301266 BC064368	107231	-	BC038213|IQSEC2|23096|IQ motif and Sec7 domain 2##BC108674|IQSEC2|23096|IQ motif and Sec7 domain 2##FJ154891|IQSEC2|23096|IQ motif and Sec7 domain 2##FJ154890|IQSEC2|23096|IQ motif and Sec7 domain 2##AK095232|IQSEC2|23096|IQ motif and Sec7 domain 2##NM_001243197|IQSEC2|23096|IQ motif and Sec7 domain 2##NM_015075|IQSEC2|23096|IQ motif and Sec7 domain 2##L25270|KDM5C|8242|lysine (K)-specific demethylase 5C##NM_001146702|KDM5C|8242|lysine (K)-specific demethylase 5C##NM_004187|KDM5C|8242|lysine (K)-specific demethylase 5C##BC054499|KDM5C|8242|lysine (K)-specific demethylase 5C##BC047751|KDM5C|8242|lysine (K)-specific demethylase 5C##AK308077|KDM5C|8242|lysine (K)-specific demethylase 5C##AK304732|KDM5C|8242|lysine (K)-specific demethylase 5C##AB011094|IQSEC2|23096|IQ motif and Sec7 domain 2##NM_001111125|IQSEC2|23096|IQ motif and Sec7 domain 2##BX640922|SMC1A|8243|structural maintenance of chromosomes 1A##D80000|SMC1A|8243|structural maintenance of chromosomes 1A##HQ258690|SMC1A|8243|structural maintenance of chromosomes 1A##AF176781|SMC1A|8243|structural maintenance of chromosomes 1A##S78271|SMC1A|8243|structural maintenance of chromosomes 1A##AK301266|SMC1A|8243|structural maintenance of chromosomes 1A##BC064368|SMC1A|8243|structural maintenance of chromosomes 1A	0.971345	CTCF.p2:-12:0.971
chr2	121837879	121837984	reg1015375.p1	8.017	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	-283038	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-734134	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-827427	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	204842	-	TSC_hg19_v1_chr2_-_122159142 CR749627	321224	-	AK297259 TSC_hg19_v1_chr2_-_122247924	409988	-	NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1##AK297259|CLASP1|23332|cytoplasmic linker associated protein 1	0.998259	CTCF.p2:-2:0.998
chr8	126713001	126713143	reg1019170.p1	8.017	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-270493	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-608975	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-609015	-	TSC_hg19_v1_chr8_-_126963395 BX648371	250341	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	857483	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	857652	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.700721	CTCF.p2:16:0.701
chr14	56941261	56941384	reg1016791.p1	8.016	+	TSC_hg19_v1_chr14_+_56585163 AF302502	-356148	+	TSC_hg19_v1_chr14_+_56585131 BC009476 NM_021255 AK315727	-356328	+	L25616 TSC_hg19_v1_chr14_+_56078737 AB527439	-862573	+	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	105223	+	NM_172337 AB593056	331041	-	AK314271 BC032579 NM_021728 AB593058	335822	-	AF302502|PELI2|57161|pellino homolog 2 (Drosophila)##BC009476|PELI2|57161|pellino homolog 2 (Drosophila)##NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)##AK315727|PELI2|57161|pellino homolog 2 (Drosophila)##L25616|KTN1|3895|kinectin 1 (kinesin receptor)##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101##NM_172337|OTX2|5015|orthodenticle homeobox 2##AB593056|OTX2|5015|orthodenticle homeobox 2##AK314271|OTX2|5015|orthodenticle homeobox 2##BC032579|OTX2|5015|orthodenticle homeobox 2##NM_021728|OTX2|5015|orthodenticle homeobox 2##AB593058|OTX2|5015|orthodenticle homeobox 2	0.722326	CTCF.p2:16:0.722
chr17	31082232	31082348	reg1015380.p2	8.016	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-267530	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-267693	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-268219	+	CU688936 AB385376 AB018270 BC146763 NM_015194	121605	-	TSC_hg19_v1_chr17_-_31204141 AK127942	121833	-	TSC_hg19_v1_chr17_-_31204196 BC030602	121923	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.284039	CTCF.p2:5:0.284
chr21	45209306	45209420	reg1015157.p2	8.016	+	TSC_hg19_v1_chr21_-_45196227 BC010532 L03558 NM_000100	-13134	-	BT007040 CR542148 DQ890923 DQ894073 TSC_hg19_v1_chr21_-_45196190 AK312133 BC003370	-13192	-	AL110184 TSC_hg19_v1_chr21_+_45178006	-31429	+	TSC_hg19_v1_chr21_+_45209429 NM_003683	52	+	TSC_hg19_v1_chr21_+_45209457 AK223185 AK303000 AK223215 AK313116 BC000380 U79775 CU674182 DQ891391 DQ894567 BC014787	122	+	TSC_hg19_v1_chr21_+_45285029 AY358704	75697	+	BC010532|CSTB|1476|cystatin B (stefin B)##L03558|CSTB|1476|cystatin B (stefin B)##NM_000100|CSTB|1476|cystatin B (stefin B)##BT007040|CSTB|1476|cystatin B (stefin B)##CR542148|CSTB|1476|cystatin B (stefin B)##DQ890923|CSTB|1476|cystatin B (stefin B)##DQ894073|CSTB|1476|cystatin B (stefin B)##AK312133|CSTB|1476|cystatin B (stefin B)##BC003370|CSTB|1476|cystatin B (stefin B)##AL110184|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase##NM_003683|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK223185|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK303000|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK223215|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK313116|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC000380|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##U79775|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ891391|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ894567|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC014787|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3	0.101775	
chr3	155070826	155070960	reg1018979.p1	8.016	+	NM_007289 TSC_hg19_v1_chr3_+_154798107 BC101632 BC143465 BC101658	-272760	+	TSC_hg19_v1_chr3_+_154797924 NM_007288	-272962	+	TSC_hg19_v1_chr3_+_154797847 Y00811	-273021	+	NM_001130960 NM_001130961 TSC_hg19_v1_chr3_-_155394133 AK096620	323261	-	BC113950 NM_014996	351103	-	BC042198 AF115515 TSC_hg19_v1_chr3_-_155524068 BC064898 AK055701 NM_173657 AL832165 AK289890	453168	-	NM_007289|MME|4311|membrane metallo-endopeptidase##BC101632|MME|4311|membrane metallo-endopeptidase##BC143465|MME|4311|membrane metallo-endopeptidase##BC101658|MME|4311|membrane metallo-endopeptidase##NM_007288|MME|4311|membrane metallo-endopeptidase##Y00811|MME|4311|membrane metallo-endopeptidase##NM_001130960|PLCH1|23007|phospholipase C, eta 1##NM_001130961|PLCH1|23007|phospholipase C, eta 1##AK096620|PLCH1|23007|phospholipase C, eta 1##BC113950|PLCH1|23007|phospholipase C, eta 1##NM_014996|PLCH1|23007|phospholipase C, eta 1##BC042198|C3orf33|285315|chromosome 3 open reading frame 33##AF115515|C3orf33|285315|chromosome 3 open reading frame 33##BC064898|C3orf33|285315|chromosome 3 open reading frame 33##AK055701|C3orf33|285315|chromosome 3 open reading frame 33##NM_173657|C3orf33|285315|chromosome 3 open reading frame 33##AL832165|C3orf33|285315|chromosome 3 open reading frame 33##AK289890|C3orf33|285315|chromosome 3 open reading frame 33	0.994859	CTCF.p2:-4:0.995
chr7	116449864	116449989	reg1017268.p2	8.016	+	TSC_hg19_v1_chr7_+_116395441 BC127890	-54475	+	AK296974 TSC_hg19_v1_chr7_+_116364175	-85751	+	TSC_hg19_v1_chr7_+_116312490 EU176015 J02958 NM_000245 NM_001127500 X54559 DQ656040 BC130420 AK309532	-137454	+	TSC_hg19_v1_chr7_+_116451073 DQ655955 DQ655956	1172	+	TSC_hg19_v1_chr7_+_116502581 NM_006136	52631	+	AK314808 TSC_hg19_v1_chr7_+_116502591	52665	+	AK296974|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##EU176015|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##DQ655955|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##DQ655956|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	0.985205	CTCF.p2:13:0.985
chr8	125437622	125437750	reg1015516.p1	8.016	+	TSC_hg19_v1_chr8_-_125384925 BC041379 NM_194291	-52734	-	BC101502 BC101506 AK057332 TSC_hg19_v1_chr8_-_125183771	-253948	-	AB196633 NM_001039112	-573460	+	TSC_hg19_v1_chr8_+_125463060 NM_017956 AK225083 AK000779 AK222727 BC011713 BC003057	25386	+	TSC_hg19_v1_chr8_-_125486793 CR933665	49091	-	TSC_hg19_v1_chr8_-_125486808 AK075052	49145	-	BC041379|TMEM65|157378|transmembrane protein 65##NM_194291|TMEM65|157378|transmembrane protein 65##BC101502|C8orf78|157376|chromosome 8 open reading frame 78##BC101506|C8orf78|157376|chromosome 8 open reading frame 78##AK057332|C8orf78|157376|chromosome 8 open reading frame 78##AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_017956|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK225083|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK000779|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK222727|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC011713|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC003057|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)	0.970304	CTCF.p2:14:0.970
chr12	60228872	60228990	reg1014115.p1	8.015	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	-145792	+	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	-239014	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-914629	-	BC050347 NM_178539	2357652	-	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	2425253	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	2631648	+	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)	0.87931	CTCF.p2:13:0.879
chr13	37432476	37432600	reg1017175.p1	8.015	+	TSC_hg19_v1_chr13_+_37393356 NM_000538 AK313912 BC026088 DQ891169 DQ893581 DQ894352	-39139	+	BC036540 NM_203451 AK294236	-184436	+	TSC_hg19_v1_chr13_+_37006631 AK225146 U66838 BC035479 BC036346 AB462995 AM393372 BT019577 DQ891303 DQ894488	-425845	+	TSC_hg19_v1_chr13_-_37494376 BC067766 NM_001127217 NM_005905	61851	-	CU680348 TSC_hg19_v1_chr13_-_37573465 AF161498 BC012531 AF183413 AK299126	140915	-	TSC_hg19_v1_chr13_-_37573478 AK299085 NM_001142364 NM_013338	140951	-	NM_000538|RFXAP|5994|regulatory factor X-associated protein##AK313912|RFXAP|5994|regulatory factor X-associated protein##BC026088|RFXAP|5994|regulatory factor X-associated protein##DQ891169|RFXAP|5994|regulatory factor X-associated protein##DQ893581|RFXAP|5994|regulatory factor X-associated protein##DQ894352|RFXAP|5994|regulatory factor X-associated protein##BC036540|SERTM1|400120|serine-rich and transmembrane domain containing 1##NM_203451|SERTM1|400120|serine-rich and transmembrane domain containing 1##AK294236|SERTM1|400120|serine-rich and transmembrane domain containing 1##AK225146|CCNA1|8900|cyclin A1##U66838|CCNA1|8900|cyclin A1##BC035479|CCNA1|8900|cyclin A1##BC036346|CCNA1|8900|cyclin A1##AM393372|CCNA1|8900|cyclin A1##BT019577|CCNA1|8900|cyclin A1##DQ891303|CCNA1|8900|cyclin A1##DQ894488|CCNA1|8900|cyclin A1##BC067766|SMAD9|4093|SMAD family member 9##NM_001127217|SMAD9|4093|SMAD family member 9##NM_005905|SMAD9|4093|SMAD family member 9##AF161498|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##BC012531|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##AF183413|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##AK299126|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##AK299085|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##NM_001142364|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##NM_013338|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)	0.999362	CTCF.p2:-9:0.999
chr16	84759739	84759885	reg1018784.p1	8.015	+	TSC_hg19_v1_chr16_+_84733611 AL162049 BX537402 D80012	-26182	+	TSC_hg19_v1_chr16_+_84733609 AK293304 AK299618	-26205	+	TSC_hg19_v1_chr16_+_84733603 AK315570 CR749515	-26212	+	TSC_hg19_v1_chr16_+_84853586 NM_031476 AY358790 AK303887 AK308396 AY358413 BC063012 BC007689 AL136861 AK027395	93791	+	TSC_hg19_v1_chr16_-_85045098 AK225768	285281	-	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	285317	-	AL162049|USP10|9100|ubiquitin specific peptidase 10##BX537402|USP10|9100|ubiquitin specific peptidase 10##D80012|USP10|9100|ubiquitin specific peptidase 10##AK293304|USP10|9100|ubiquitin specific peptidase 10##AK299618|USP10|9100|ubiquitin specific peptidase 10##AK315570|USP10|9100|ubiquitin specific peptidase 10##CR749515|USP10|9100|ubiquitin specific peptidase 10##NM_031476|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AY358790|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK303887|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK308396|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC063012|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC007689|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AL136861|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK027395|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK225768|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7	0.708895	CTCF.p2:10:0.612
chr3	160991529	160991654	reg1016575.p1	8.015	+	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-52470	+	AK225664 TSC_hg19_v1_chr3_+_160939097	-52495	+	AB050856 NM_033169 TSC_hg19_v1_chr3_-_160823138 AY359049 BC047618 AK223439 BC028571 AF154848 AK022491 AK095917 NM_001038628 NM_003781 NM_033167 NM_033168	-168654	-	AF458592 BC037817 NM_001040100	98217	-	NM_001080440	223004	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	3804687	-	AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK225664|NMD3|51068|NMD3 homolog (S. cerevisiae)##AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001080440|OTOL1|131149|otolin 1##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)	0.999967	CTCF.p2:7:1.000
chr7	22150147	22150328	reg1000172.p2	8.015	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-164755	-	AJ320497 NM_003777	-567405	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-681913	+	AL833195 NM_012294	246284	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	389610	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	616586	+	AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)	0.0	
chr19	35203693	35203819	reg1017108.p1	8.014	+	TSC_hg19_v1_chr19_+_35168582 AL834318 NM_001012320 NM_018443 AK074901 AF155656 AK315241 AF190157 AK297551 AK131278 BC024176 AF265236 AF326206	-35107	+	BC093909 BC093935 NM_001025591	-118267	-	TSC_hg19_v1_chr19_+_34972869 NM_001080436	-230884	+	TSC_hg19_v1_chr19_+_35225102 BC043228	21342	+	TSC_hg19_v1_chr19_+_35225150 AK295492	21400	+	NM_001029997 NM_001145665	21723	+	AL834318|ZNF302|55900|zinc finger protein 302##NM_001012320|ZNF302|55900|zinc finger protein 302##NM_018443|ZNF302|55900|zinc finger protein 302##AK074901|ZNF302|55900|zinc finger protein 302##AF155656|ZNF302|55900|zinc finger protein 302##AK315241|ZNF302|55900|zinc finger protein 302##AF190157|ZNF302|55900|zinc finger protein 302##AK131278|ZNF302|55900|zinc finger protein 302##BC024176|ZNF302|55900|zinc finger protein 302##AF265236|ZNF302|55900|zinc finger protein 302##AF326206|ZNF302|55900|zinc finger protein 302##BC093909|SCGBL|284402|secretoglobin-like##BC093935|SCGBL|284402|secretoglobin-like##NM_001025591|SCGBL|284402|secretoglobin-like##NM_001080436|WTIP|126374|Wilms tumor 1 interacting protein##BC043228|ZNF181|339318|zinc finger protein 181##AK295492|ZNF181|339318|zinc finger protein 181##NM_001029997|ZNF181|339318|zinc finger protein 181##NM_001145665|ZNF181|339318|zinc finger protein 181	0.99907	CTCF.p2:24:0.999
chr6	139430810	139430924	reg1015682.p2	8.013	+	TSC_hg19_v1_chr6_+_139349935 AK309402 AF116682 BC014953	-80949	+	NM_021243 AF161398 TSC_hg19_v1_chr6_+_139349850	-81030	+	TSC_hg19_v1_chr6_-_139309391 BC012764 NM_001128617 NM_031922	-121457	-	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	25389	+	TSC_hg19_v1_chr6_-_139613136 BX647633 AL834248 AL831988 AK314725 BX647477 BC115383 BC115384 AB085905 NM_153235	182293	-	NM_001168389 NM_001168388	264556	-	AF116682|C6orf115|58527|chromosome 6 open reading frame 115##BC014953|C6orf115|58527|chromosome 6 open reading frame 115##NM_021243|C6orf115|58527|chromosome 6 open reading frame 115##AF161398|C6orf115|58527|chromosome 6 open reading frame 115##BC012764|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_001128617|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_031922|REPS1|85021|RALBP1 associated Eps domain containing 1##BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)##BX647633|TXLNB|167838|taxilin beta##AL834248|TXLNB|167838|taxilin beta##AL831988|TXLNB|167838|taxilin beta##AK314725|TXLNB|167838|taxilin beta##BX647477|TXLNB|167838|taxilin beta##BC115383|TXLNB|167838|taxilin beta##BC115384|TXLNB|167838|taxilin beta##AB085905|TXLNB|167838|taxilin beta##NM_153235|TXLNB|167838|taxilin beta##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	0.7819	CTCF.p2:13:0.782
chr10	16158531	16158633	reg1015917.p1	8.012	+	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	-256091	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	-396789	-	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	-745433	-	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	320403	+	NM_001010908	405421	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	700777	-	BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related##NM_001010908|C1QL3|389941|complement component 1, q subcomponent-like 3##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1	0.770157	CTCF.p2:-13:0.770
chr1	236006820	236006959	reg1017978.p1	8.012	+	BC022485 NM_001098721 NM_004485	-192836	-	TSC_hg19_v1_chr1_-_235813301 AK311781 NM_001098722	-193707	-	BC029564 NM_152490 TSC_hg19_v1_chr1_-_235667782	-339108	-	TSC_hg19_v1_chr1_-_236030193 BC020793	23294	-	NM_000081 U67615 TSC_hg19_v1_chr1_-_236030233	23355	-	TSC_hg19_v1_chr1_-_236228375 AB209448 CU692272	221488	-	BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##AK311781|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098722|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##BC029564|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_152490|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_000081|LYST|1130|lysosomal trafficking regulator##U67615|LYST|1130|lysosomal trafficking regulator##AB209448|NID1|4811|nidogen 1	0.429137	CTCF.p2:0:0.429
chr9	23492259	23492375	reg1016896.p1	8.012	+	AJ290954 TSC_hg19_v1_chr9_+_22447458 AK130018	-1044868	+	AB464510 TSC_hg19_v1_chr9_+_22447162	-1045204	+	TSC_hg19_v1_chr9_+_22446846 AK096011 NM_022160 BC130435 BC130437	-1045480	+	BC030692 NM_001171197	329160	-	TSC_hg19_v1_chr9_-_23821819 BC035004	329496	-	BC042393 NM_001171195 TSC_hg19_v1_chr9_-_23821847	329527	-	AJ290954|DMRTA1|63951|DMRT-like family A1##AK130018|DMRTA1|63951|DMRT-like family A1##AK096011|DMRTA1|63951|DMRT-like family A1##NM_022160|DMRTA1|63951|DMRT-like family A1##BC130435|DMRTA1|63951|DMRT-like family A1##BC130437|DMRTA1|63951|DMRT-like family A1##BC030692|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171197|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC035004|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC042393|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171195|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	0.843288	CTCF.p2:9:0.843
chr15	84836246	84836376	reg1016683.p1	8.010	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-513484	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-720083	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-720251	+	NM_001243531	4930	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	307970	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	361161	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.919612	CTCF.p2:-16:0.920
chr19	10594337	10594448	reg1012965.p1	8.010	+	TSC_hg19_v1_chr19_+_10563605 BC038234 NM_006202 BC019864	-30724	+	AF073745 NM_001111309	-51282	+	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	-52965	+	TSC_hg19_v1_chr19_-_10613392 BC002930 AF361886 D50922 NM_012289	19046	-	TSC_hg19_v1_chr19_-_10614033 NM_203500	19522	-	TSC_hg19_v1_chr19_-_10614085 AK056204	19770	-	BC038234|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_006202|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC019864|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AF073745|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111309|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC002930|KEAP1|9817|kelch-like ECH-associated protein 1##AF361886|KEAP1|9817|kelch-like ECH-associated protein 1##D50922|KEAP1|9817|kelch-like ECH-associated protein 1##NM_012289|KEAP1|9817|kelch-like ECH-associated protein 1##NM_203500|KEAP1|9817|kelch-like ECH-associated protein 1##AK056204|KEAP1|9817|kelch-like ECH-associated protein 1	0.880255	CTCF.p2:24:0.880
chr10	51566983	51567120	reg1019967.p1	8.009	+	TSC_hg19_v1_chr10_+_51565230 BC001562 AK129911 AK302794 S71225 X77548	-1818	+	TSC_hg19_v1_chr10_+_51565201 AK293978 AK304123 AK310849	-1848	+	NM_001145260 NM_001145261 NM_001145263 TSC_hg19_v1_chr10_+_51565152 AK312325	-1912	+	NM_005437 AL162047 TSC_hg19_v1_chr10_+_51572443 BC012736	5354	+	AK292480 NM_001145262	9233	+	CU687598 CU688220 AK304883 AK223331 BC066951 NM_006327 TSC_hg19_v1_chr10_-_51623335 AF030162 AY442341 BC062707	56248	-	BC001562|NCOA4|8031|nuclear receptor coactivator 4##AK129911|NCOA4|8031|nuclear receptor coactivator 4##AK302794|NCOA4|8031|nuclear receptor coactivator 4##X77548|NCOA4|8031|nuclear receptor coactivator 4##AK293978|NCOA4|8031|nuclear receptor coactivator 4##AK304123|NCOA4|8031|nuclear receptor coactivator 4##AK310849|NCOA4|8031|nuclear receptor coactivator 4##NM_001145260|NCOA4|8031|nuclear receptor coactivator 4##NM_001145261|NCOA4|8031|nuclear receptor coactivator 4##NM_001145263|NCOA4|8031|nuclear receptor coactivator 4##AK312325|NCOA4|8031|nuclear receptor coactivator 4##NM_005437|NCOA4|8031|nuclear receptor coactivator 4##AL162047|NCOA4|8031|nuclear receptor coactivator 4##BC012736|NCOA4|8031|nuclear receptor coactivator 4##AK292480|NCOA4|8031|nuclear receptor coactivator 4##NM_001145262|NCOA4|8031|nuclear receptor coactivator 4##AK304883|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##AK223331|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##BC066951|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##NM_006327|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##AF030162|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##AY442341|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##BC062707|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)	0.645986	CTCF.p2:-7:0.646
chr12	80806287	80806403	reg1013649.p1	8.009	+	NM_173591	-203113	+	AF458589 BC092481 NM_001143885 NM_001244990	-477111	-	TSC_hg19_v1_chr12_-_80328937 NM_002480	-477379	-	NM_001145026	31780	+	NM_002469 AK313287 X52011 BC017834 AB587443 CU676084 DQ893248 DQ896577 CR407641 CR541763	295107	+	TSC_hg19_v1_chr12_+_81110690 NM_005593 BC069373 X14894 AB528948 BT019399	304420	+	NM_173591|OTOGL|283310|otogelin-like##AF458589|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC092481|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143885|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001244990|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_002480|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q##NM_002469|MYF6|4618|myogenic factor 6 (herculin)##AK313287|MYF6|4618|myogenic factor 6 (herculin)##X52011|MYF6|4618|myogenic factor 6 (herculin)##BC017834|MYF6|4618|myogenic factor 6 (herculin)##DQ893248|MYF6|4618|myogenic factor 6 (herculin)##DQ896577|MYF6|4618|myogenic factor 6 (herculin)##CR407641|MYF6|4618|myogenic factor 6 (herculin)##CR541763|MYF6|4618|myogenic factor 6 (herculin)##NM_005593|MYF5|4617|myogenic factor 5##BC069373|MYF5|4617|myogenic factor 5##X14894|MYF5|4617|myogenic factor 5##BT019399|MYF5|4617|myogenic factor 5	0.997751	CTCF.p2:-17:0.998
chr3	13036561	13036711	reg1017815.p1	8.009	+	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	-27528	-	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	-95028	-	BC011514 BC070209 X03342 D28385 AK311909 TSC_hg19_v1_chr3_-_12883042 NM_000994 NM_001007073	-153593	-	TSC_hg19_v1_chr3_-_13057189 BC071805	20582	-	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	77962	-	AB020713 TSC_hg19_v1_chr3_-_13384784	348129	-	AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1##BC011514|RPL32|6161|ribosomal protein L32##BC070209|RPL32|6161|ribosomal protein L32##X03342|RPL32|6161|ribosomal protein L32##D28385|RPL32|6161|ribosomal protein L32##AK311909|RPL32|6161|ribosomal protein L32##NM_000994|RPL32|6161|ribosomal protein L32##NM_001007073|RPL32|6161|ribosomal protein L32##AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##AB020713|NUP210|23225|nucleoporin 210kDa	0.685257	CTCF.p2:6:0.685
chr5	110201525	110201660	reg1019595.p1	8.009	+	TSC_hg19_v1_chr5_+_110074741 AK300123 BC017169 NM_138773 M74089 AK290217 AB529063	-126812	+	TSC_hg19_v1_chr5_+_110074720 AK091427	-126869	+	AK296542 BC042563 BX648527 NM_001039763	-139185	-	AY037115 NM_033035	205797	+	AF385437 NM_139281 BC133025 BC136517 AK095312 TSC_hg19_v1_chr5_+_110428045 AL832494	226367	+	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	358357	+	AK300123|SLC25A46|91137|solute carrier family 25, member 46##BC017169|SLC25A46|91137|solute carrier family 25, member 46##NM_138773|SLC25A46|91137|solute carrier family 25, member 46##M74089|SLC25A46|91137|solute carrier family 25, member 46##AK290217|SLC25A46|91137|solute carrier family 25, member 46##AK091427|SLC25A46|91137|solute carrier family 25, member 46##AK296542|TMEM232|642987|transmembrane protein 232##BC042563|TMEM232|642987|transmembrane protein 232##BX648527|TMEM232|642987|transmembrane protein 232##NM_001039763|TMEM232|642987|transmembrane protein 232##AY037115|TSLP|85480|thymic stromal lymphopoietin##NM_033035|TSLP|85480|thymic stromal lymphopoietin##AF385437|WDR36|134430|WD repeat domain 36##NM_139281|WDR36|134430|WD repeat domain 36##BC133025|WDR36|134430|WD repeat domain 36##BC136517|WDR36|134430|WD repeat domain 36##AK095312|WDR36|134430|WD repeat domain 36##AL832494|WDR36|134430|WD repeat domain 36##L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV	0.998571	CTCF.p2:10:0.999
chr12	6647144	6647249	reg1016008.p1	8.008	+	TSC_hg19_v1_chr12_+_6643982 M17851 AY633612 BC023632 DQ891557 DQ894744 AB463693 CU679249 J02642 BT006893 CR407671	-3214	+	TSC_hg19_v1_chr12_+_6643683 AF261085 NM_002046 AK308198 AK299448 BC009081 BC013310 M33197 BC025925 BC029618 X53778 AB062273 AY007133 BC004109 BC083511 BC029340 BC001601 BC020308 BC026907	-3534	+	TSC_hg19_v1_chr12_+_6603297 BC028182 AK022511 NM_014865	-43902	+	M36164 TSC_hg19_v1_chr12_+_6647482	221	+	TSC_hg19_v1_chr12_-_6665250 BC001790 BC010431 BC023664 BC110387 NM_001039670 NM_001193457 NM_080730	18062	-	TSC_hg19_v1_chr12_-_6677453 BC000656 BC065257 AK129852 BC106072 BC082985 BC128183 BC128184 AK056208 AK307582 NM_001033714 NM_006170	30270	-	M17851|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AY633612|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC023632|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##DQ891557|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##DQ894744|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##J02642|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BT006893|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##CR407671|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AF261085|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##NM_002046|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AK308198|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AK299448|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC009081|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC013310|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##M33197|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC025925|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC029618|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##X53778|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AB062273|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AY007133|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC004109|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC083511|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC029340|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC001601|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC020308|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC026907|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC028182|NCAPD2|9918|non-SMC condensin I complex, subunit D2##AK022511|NCAPD2|9918|non-SMC condensin I complex, subunit D2##NM_014865|NCAPD2|9918|non-SMC condensin I complex, subunit D2##M36164|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC001790|IFFO1|25900|intermediate filament family orphan 1##BC010431|IFFO1|25900|intermediate filament family orphan 1##BC023664|IFFO1|25900|intermediate filament family orphan 1##BC110387|IFFO1|25900|intermediate filament family orphan 1##NM_001039670|IFFO1|25900|intermediate filament family orphan 1##NM_001193457|IFFO1|25900|intermediate filament family orphan 1##NM_080730|IFFO1|25900|intermediate filament family orphan 1##BC000656|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC065257|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK129852|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC106072|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC082985|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC128183|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC128184|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK056208|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK307582|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##NM_001033714|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##NM_006170|NOP2|4839|NOP2 nucleolar protein homolog (yeast)	0.99976	CTCF.p2:21:1.000
chr16	85474843	85474958	reg1014259.p2	8.008	+	BC093665 BC111944 AK126284 NM_198491	-328846	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-413530	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-429771	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	170121	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	172053	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	247642	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	1.374282	CTCF.p2:13:0.559	CTCF.p2:-52:0.815
chr22	38496910	38497031	reg1015809.p1	8.008	+	AF132610 NM_013356	-17812	-	TSC_hg19_v1_chr22_+_38453478 CR456550	-43459	+	AK092818 AX747747 NM_001039583 NM_001039584 NM_012407 AK308792 TSC_hg19_v1_chr22_+_38453410 AK299684 AK310629 AK000875 AK222640 AL049654 BC017561 AB026491	-43611	+	CU677367 TSC_hg19_v1_chr22_-_38506639 AK026235 BC015619	9632	-	TSC_hg19_v1_chr22_-_38506676 AY358164 NM_025045	9707	-	CR456543 TSC_hg19_v1_chr22_-_38577838 AK291212 BC036742 AL080187 NM_001004426 NM_003560 AF064594 AK308308 BC051904 AK096521 AK290825 NM_001199562 AK300459	80823	-	AF132610|SLC16A8|23539|solute carrier family 16, member 8 (monocarboxylic acid transporter 3)##NM_013356|SLC16A8|23539|solute carrier family 16, member 8 (monocarboxylic acid transporter 3)##CR456550|PICK1|9463|protein interacting with PRKCA 1##AK092818|PICK1|9463|protein interacting with PRKCA 1##NM_001039583|PICK1|9463|protein interacting with PRKCA 1##NM_001039584|PICK1|9463|protein interacting with PRKCA 1##NM_012407|PICK1|9463|protein interacting with PRKCA 1##AK308792|PICK1|9463|protein interacting with PRKCA 1##AK299684|PICK1|9463|protein interacting with PRKCA 1##AK310629|PICK1|9463|protein interacting with PRKCA 1##AK000875|PICK1|9463|protein interacting with PRKCA 1##AK222640|PICK1|9463|protein interacting with PRKCA 1##AL049654|PICK1|9463|protein interacting with PRKCA 1##BC017561|PICK1|9463|protein interacting with PRKCA 1##AB026491|PICK1|9463|protein interacting with PRKCA 1##AK026235|BAIAP2L2|80115|BAI1-associated protein 2-like 2##BC015619|BAIAP2L2|80115|BAI1-associated protein 2-like 2##AY358164|BAIAP2L2|80115|BAI1-associated protein 2-like 2##NM_025045|BAIAP2L2|80115|BAI1-associated protein 2-like 2##CR456543|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK291212|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##BC036742|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AL080187|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001004426|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_003560|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AF064594|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK308308|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##BC051904|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK096521|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK290825|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001199562|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK300459|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)	0.813015	CTCF.p2:-6:0.813
chr2	239279531	239279648	reg1017610.p1	8.008	+	TSC_hg19_v1_chr2_+_239229215 AB590948 CU691344 AF230877	-50331	+	TSC_hg19_v1_chr2_+_239229202 BC059174 NM_001139490 NM_015650	-50414	+	TSC_hg19_v1_chr2_+_239229037 AF242456	-50530	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	56017	+	TSC_hg19_v1_chr2_+_239335693 AF156777	56100	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	477174	+	AF230877|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##BC059174|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##NM_001139490|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##NM_015650|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##AF242456|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)	0.497919	CTCF.p2:0:0.498
chr11	111299878	111300023	reg1017423.p1	8.007	+	NM_006235	-49794	-	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	-49998	-	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	-129917	+	BC031045 NM_017589	83120	-	AK128145 NM_001100388 NM_207430 BC039505	85572	+	AK055539 NM_178834	111282	+	NM_006235|POU2AF1|5450|POU class 2 associating factor 1##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##BC031045|BTG4|54766|B-cell translocation gene 4##NM_017589|BTG4|54766|B-cell translocation gene 4##AK128145|C11orf88|399949|chromosome 11 open reading frame 88##NM_001100388|C11orf88|399949|chromosome 11 open reading frame 88##NM_207430|C11orf88|399949|chromosome 11 open reading frame 88##BC039505|C11orf88|399949|chromosome 11 open reading frame 88##AK055539|LAYN|143903|layilin##NM_178834|LAYN|143903|layilin	0.896474	CTCF.p2:0:0.896
chr1	163379904	163380042	reg1016325.p1	8.007	+	NM_031423 NM_145697 TSC_hg19_v1_chr1_+_163291746 AK093348 AX748068 AF326731 BC008489 AB050577	-88197	+	TSC_hg19_v1_chr1_-_163291574 BC032239	-88412	-	TSC_hg19_v1_chr1_-_163172866 NM_003617	-207061	-	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	1148618	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	1149013	+	TSC_hg19_v1_chr1_+_164818083 AK022520	1438150	+	NM_031423|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_145697|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK093348|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AF326731|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC008489|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AB050577|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_003617|RGS5|8490|regulator of G-protein signaling 5##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1	0.961951	CTCF.p2:-20:0.962
chr11	66311315	66311450	reg1014500.p1	8.007	+	AK095638 TSC_hg19_v1_chr11_+_66278105 BX647612 AK294962 AK302657 AK296311 BC047642 AF503941 NM_024649 BC109064 BC109065	-33266	+	TSC_hg19_v1_chr11_+_66247908 AK021449 AK222847 AK297199 AK222566 AK304581 BC014038 BC001446	-63468	+	TSC_hg19_v1_chr11_+_66247882 AL833475 NM_005700 NM_130443 BC007221	-63492	+	CU691266 TSC_hg19_v1_chr11_-_66313501 BC057833	2105	-	TSC_hg19_v1_chr11_-_66313539 AY358448 NM_207340 AK301787 AK310561	2225	-	AK313556 BC096323 BC099647 BC099648 BC099649 M86407 NM_001104	2999	+	AK095638|BBS1|582|Bardet-Biedl syndrome 1##BX647612|BBS1|582|Bardet-Biedl syndrome 1##AK294962|BBS1|582|Bardet-Biedl syndrome 1##AK302657|BBS1|582|Bardet-Biedl syndrome 1##AK296311|BBS1|582|Bardet-Biedl syndrome 1##BC047642|BBS1|582|Bardet-Biedl syndrome 1##AF503941|BBS1|582|Bardet-Biedl syndrome 1##NM_024649|BBS1|582|Bardet-Biedl syndrome 1##BC109064|BBS1|582|Bardet-Biedl syndrome 1##BC109065|BBS1|582|Bardet-Biedl syndrome 1##AK021449|DPP3|10072|dipeptidyl-peptidase 3##AK222847|DPP3|10072|dipeptidyl-peptidase 3##AK297199|DPP3|10072|dipeptidyl-peptidase 3##AK222566|DPP3|10072|dipeptidyl-peptidase 3##AK304581|DPP3|10072|dipeptidyl-peptidase 3##BC014038|DPP3|10072|dipeptidyl-peptidase 3##BC001446|DPP3|10072|dipeptidyl-peptidase 3##AL833475|DPP3|10072|dipeptidyl-peptidase 3##NM_005700|DPP3|10072|dipeptidyl-peptidase 3##NM_130443|DPP3|10072|dipeptidyl-peptidase 3##BC007221|DPP3|10072|dipeptidyl-peptidase 3##BC057833|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AY358448|ZDHHC24|254359|zinc finger, DHHC-type containing 24##NM_207340|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AK301787|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AK310561|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AK313556|ACTN3|89|actinin, alpha 3##BC096323|ACTN3|89|actinin, alpha 3##BC099647|ACTN3|89|actinin, alpha 3##BC099648|ACTN3|89|actinin, alpha 3##BC099649|ACTN3|89|actinin, alpha 3##M86407|ACTN3|89|actinin, alpha 3##NM_001104|ACTN3|89|actinin, alpha 3	0.54687	CTCF.p2:-24:0.547
chr1	192443334	192443484	reg1019110.p1	8.007	+	AY643711 NM_001039152	-157288	+	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	-315806	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	-1996674	-	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	101499	+	NM_002927 NM_144766 AF030107 BC016667	161875	+	BC042755 BC044742 NM_002923 TSC_hg19_v1_chr1_+_192778168 AK313668 BC007049 L13463 AY971351 AB528517 AF493926 BT007065 CR457410 CU675517 DQ893178 DQ896478	334775	+	AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1##NM_002927|RGS13|6003|regulator of G-protein signaling 13##NM_144766|RGS13|6003|regulator of G-protein signaling 13##AF030107|RGS13|6003|regulator of G-protein signaling 13##BC016667|RGS13|6003|regulator of G-protein signaling 13##BC042755|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC044742|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002923|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AK313668|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC007049|RGS2|5997|regulator of G-protein signaling 2, 24kDa##L13463|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AY971351|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AF493926|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT007065|RGS2|5997|regulator of G-protein signaling 2, 24kDa##CR457410|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ893178|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ896478|RGS2|5997|regulator of G-protein signaling 2, 24kDa	0.9398	CTCF.p2:-11:0.940
chr18	3594402	3594499	reg1012630.p2	8.007	+	TSC_hg19_v1_chr18_+_3594077 AK093095 AX747919 BC137437	-308	+	NM_173211	-140679	+	TSC_hg19_v1_chr18_+_3451599 NM_170695 NM_173210 AK307230 BC031268	-142819	+	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	250880	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	279834	-	AK294777 AK294717 NM_001242762 NM_001242763	280277	-	AK093095|FLJ35776|649446|uncharacterized LOC649446##BC137437|FLJ35776|649446|uncharacterized LOC649446##NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1##NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1##BC031268|TGIF1|7050|TGFB-induced factor homeobox 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	0.95563	CTCF.p2:-25:0.956
chr2	112608343	112608459	reg1016946.p2	8.007	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-729914	+	AK300513 NM_001142807 BC022268	-1118222	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-1172579	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	33225	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	33360	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	47784	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.923469	CTCF.p2:5:0.923
chr4	122229059	122229177	reg1016100.p2	8.007	+	AK303192 NM_001244764	-80498	-	AK301058 NM_001128843	-91337	-	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	-143634	-	TSC_hg19_v1_chr4_-_122302115 NM_198179 AK309337	73044	-	BC012804 BC012822 TSC_hg19_v1_chr4_-_122618109 BC004993 X12454 D00172 M21731	388994	-	TSC_hg19_v1_chr4_-_122618136 AK297909 M19384 BC018671 BC032093	389015	-	AK303192|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3##AK301058|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3##AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3##NM_198179|QRFPR|84109|pyroglutamylated RFamide peptide receptor##AK309337|QRFPR|84109|pyroglutamylated RFamide peptide receptor##BC012804|ANXA5|308|annexin A5##BC012822|ANXA5|308|annexin A5##BC004993|ANXA5|308|annexin A5##X12454|ANXA5|308|annexin A5##D00172|ANXA5|308|annexin A5##M21731|ANXA5|308|annexin A5##AK297909|ANXA5|308|annexin A5##M19384|ANXA5|308|annexin A5##BC018671|ANXA5|308|annexin A5##BC032093|ANXA5|308|annexin A5	0.772574	CTCF.p2:22:0.773
chr2	228913750	228913863	reg1018155.p1	8.006	+	AK097409 NM_178821 BC036377 AK098821 AK301861	-177454	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	-235215	+	AF271633 BC032014 AK301490 AF283317 AK312464 NM_025243	-331085	-	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	132556	-	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	1222199	-	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	1665442	-	AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AF271633|SLC19A3|80704|solute carrier family 19, member 3##BC032014|SLC19A3|80704|solute carrier family 19, member 3##AK301490|SLC19A3|80704|solute carrier family 19, member 3##AF283317|SLC19A3|80704|solute carrier family 19, member 3##AK312464|SLC19A3|80704|solute carrier family 19, member 3##NM_025243|SLC19A3|80704|solute carrier family 19, member 3##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing	0.265507	CTCF.p2:-7:0.266
chr11	73046024	73046142	reg1001036.p1	8.004	+	TSC_hg19_v1_chr11_-_73020422 AK300095	-25660	-	BC137228 NM_014786 AF378754	-26418	+	TSC_hg19_v1_chr11_+_73019337 AK074500	-26679	+	TSC_hg19_v1_chr11_+_73087471 AK027899 NM_152222 BC051810 BC017279	41354	+	TSC_hg19_v1_chr11_+_73087683 AF319553 NM_032871	41608	+	D87470 TSC_hg19_v1_chr11_-_73309158 AK292054 EF197985 BC052341 EF363480 NM_015159	263115	-	AK300095|LOC100287837|100287837|uncharacterized LOC100287837##BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK027899|RELT|84957|RELT tumor necrosis factor receptor##NM_152222|RELT|84957|RELT tumor necrosis factor receptor##BC051810|RELT|84957|RELT tumor necrosis factor receptor##BC017279|RELT|84957|RELT tumor necrosis factor receptor##AF319553|RELT|84957|RELT tumor necrosis factor receptor##NM_032871|RELT|84957|RELT tumor necrosis factor receptor##D87470|FAM168A|23201|family with sequence similarity 168, member A##AK292054|FAM168A|23201|family with sequence similarity 168, member A##EF197985|FAM168A|23201|family with sequence similarity 168, member A##BC052341|FAM168A|23201|family with sequence similarity 168, member A##EF363480|FAM168A|23201|family with sequence similarity 168, member A##NM_015159|FAM168A|23201|family with sequence similarity 168, member A	0.0	
chr1	203338386	203338493	reg1017295.p1	8.004	+	TSC_hg19_v1_chr1_-_203320290 NM_002023	-18151	-	AK172740 TSC_hg19_v1_chr1_-_203320256	-18178	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	-18230	-	NM_002725 NM_201348 TSC_hg19_v1_chr1_+_203444937	106470	+	U29089 BC032498 TSC_hg19_v1_chr1_+_203444965	106521	+	AJ133790 AY077681 NM_014359 AF161702	124842	+	NM_002023|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin##NM_002725|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_201348|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##U29089|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##BC032498|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin	0.0	
chr10	23814479	23814581	reg1017056.p1	8.003	+	AB188491 NM_001145373 TSC_hg19_v1_chr10_+_23728216	-86320	+	BC035732 NM_153714	-180759	-	AB463998 NM_178161	-333072	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	169147	+	AK091142 AX746804 NM_001098501 NM_019590 TSC_hg19_v1_chr10_+_24497850	683258	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	683564	+	AB188491|OTUD1|220213|OTU domain containing 1##NM_001145373|OTUD1|220213|OTU domain containing 1##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67##NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a##AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217##AK091142|KIAA1217|56243|KIAA1217##NM_001098501|KIAA1217|56243|KIAA1217##NM_019590|KIAA1217|56243|KIAA1217##AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217	0.03518	
chr12	119278321	119278459	reg1018000.p1	8.003	+	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	-463988	+	TSC_hg19_v1_chr12_-_118810713 NM_016281	-467660	-	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	-467762	-	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	140957	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	338289	+	BC040553 NM_178499	494126	+	BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_016281|TAOK3|51347|TAO kinase 3##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60	0.606139	CTCF.p2:23:0.606
chr12	56696265	56696381	reg1016513.p1	8.003	+	NM_004077 TSC_hg19_v1_chr12_-_56694176	-2148	-	TSC_hg19_v1_chr12_-_56694158 BX640838 AF053631	-2179	-	TSC_hg19_v1_chr12_-_56694115 AK307625	-2205	-	TSC_hg19_v1_chr12_-_56709750 AF186113 AB015631 BC065015	13391	-	TSC_hg19_v1_chr12_-_56709793 BC001027 AK312921	13477	-	TSC_hg19_v1_chr12_-_56709831 AY032624 AY359102 NM_001190991 NM_014255	13656	-	NM_004077|CS|1431|citrate synthase##BX640838|CS|1431|citrate synthase##AF053631|CS|1431|citrate synthase##AK307625|CS|1431|citrate synthase##AF186113|CNPY2|10330|canopy 2 homolog (zebrafish)##AB015631|CNPY2|10330|canopy 2 homolog (zebrafish)##BC065015|CNPY2|10330|canopy 2 homolog (zebrafish)##BC001027|CNPY2|10330|canopy 2 homolog (zebrafish)##AK312921|CNPY2|10330|canopy 2 homolog (zebrafish)##AY032624|CNPY2|10330|canopy 2 homolog (zebrafish)##AY359102|CNPY2|10330|canopy 2 homolog (zebrafish)##NM_001190991|CNPY2|10330|canopy 2 homolog (zebrafish)##NM_014255|CNPY2|10330|canopy 2 homolog (zebrafish)	0.99862	CTCF.p2:6:0.999
chr15	71407659	71407780	reg1017526.p2	8.003	+	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	-222744	+	CU693296 DQ890927 DQ894089 EU176528 AL360202 TSC_hg19_v1_chr15_-_71184737 BC027857 BC072414 AK313472 NM_020147	-223028	-	CU675231 BC006082 BC009446 BC014018 AL833876 BC039153 TSC_hg19_v1_chr15_-_71146496 AK130092 AF443828 AF443829 AK002058 NM_018357 NM_197958	-261251	-	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	152	-	NM_024817 BC140868	26091	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	431861	+	BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49##DQ890927|THAP10|56906|THAP domain containing 10##DQ894089|THAP10|56906|THAP domain containing 10##EU176528|THAP10|56906|THAP domain containing 10##AL360202|THAP10|56906|THAP domain containing 10##BC027857|THAP10|56906|THAP domain containing 10##BC072414|THAP10|56906|THAP domain containing 10##AK313472|THAP10|56906|THAP domain containing 10##NM_020147|THAP10|56906|THAP domain containing 10##BC006082|LARP6|55323|La ribonucleoprotein domain family, member 6##BC009446|LARP6|55323|La ribonucleoprotein domain family, member 6##BC014018|LARP6|55323|La ribonucleoprotein domain family, member 6##AL833876|LARP6|55323|La ribonucleoprotein domain family, member 6##BC039153|LARP6|55323|La ribonucleoprotein domain family, member 6##AK130092|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443828|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443829|LARP6|55323|La ribonucleoprotein domain family, member 6##AK002058|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_018357|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_197958|LARP6|55323|La ribonucleoprotein domain family, member 6##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4	1.068566	CTCF.p2:0:0.999
chr9	116344320	116344449	reg1014955.p1	8.002	+	U27655 AK125094 TSC_hg19_v1_chr9_+_116343207	-1196	+	AF006609 NM_021106	-1445	+	TSC_hg19_v1_chr9_+_116327336 AK289666 AK301515 AK310705 NM_134427	-17052	+	AF490838 NM_144489 AK054584	11826	+	TSC_hg19_v1_chr9_+_116356408 BC018072 BC019039 CU676160	12097	+	TSC_hg19_v1_chr9_+_116638585 BC036039 NM_133374 BC136287 BC143826 AK126896 BC053892	294215	+	U27655|RGS3|5998|regulator of G-protein signaling 3##AK125094|RGS3|5998|regulator of G-protein signaling 3##AF006609|RGS3|5998|regulator of G-protein signaling 3##NM_021106|RGS3|5998|regulator of G-protein signaling 3##AK289666|RGS3|5998|regulator of G-protein signaling 3##AK301515|RGS3|5998|regulator of G-protein signaling 3##AK310705|RGS3|5998|regulator of G-protein signaling 3##NM_134427|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3##BC018072|RGS3|5998|regulator of G-protein signaling 3##BC019039|RGS3|5998|regulator of G-protein signaling 3##BC036039|ZNF618|114991|zinc finger protein 618##NM_133374|ZNF618|114991|zinc finger protein 618##BC136287|ZNF618|114991|zinc finger protein 618##BC143826|ZNF618|114991|zinc finger protein 618##AK126896|ZNF618|114991|zinc finger protein 618##BC053892|ZNF618|114991|zinc finger protein 618	0.0	
chr11	30336311	30336427	reg1017393.p1	8.001	+	NM_000510 NM_001018080	-83807	+	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	-297838	-	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-2204516	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	8283	+	CU689190 NM_001584 U57911	265610	-	TSC_hg19_v1_chr11_-_30605748 AK309809	269379	-	NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46##NM_001584|MPPED2|744|metallophosphoesterase domain containing 2##U57911|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2	0.508076	CTCF.p2:1:0.508
chr2	149897121	149897254	reg1018415.p1	8.000	+	BC040176 NM_177964	-2207	+	TSC_hg19_v1_chr2_+_149633176 AB384491	-264008	+	BC017298 TSC_hg19_v1_chr2_+_149632844	-264347	+	AK124733 NM_001195685	289311	+	NM_194317 TSC_hg19_v1_chr2_+_150187114 AY358623 AK309248	289915	+	AF131802 TSC_hg19_v1_chr2_-_150444230 AK313284	547038	-	BC040176|LYPD6B|130576|LY6/PLAUR domain containing 6B##NM_177964|LYPD6B|130576|LY6/PLAUR domain containing 6B##BC017298|KIF5C|3800|kinesin family member 5C##AK124733|LYPD6|130574|LY6/PLAUR domain containing 6##NM_001195685|LYPD6|130574|LY6/PLAUR domain containing 6##NM_194317|LYPD6|130574|LY6/PLAUR domain containing 6##AY358623|LYPD6|130574|LY6/PLAUR domain containing 6##AK309248|LYPD6|130574|LY6/PLAUR domain containing 6##AF131802|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK313284|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria	0.308577	CTCF.p2:-3:0.309
chr3	79570525	79570637	reg1014764.p1	8.000	+	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-501994	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-903596	-	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-2481301	+	NM_002941	246477	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	2240116	-	TSC_hg19_v1_chr3_-_81810798 AK312245	2240217	-	NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.997017	CTCF.p2:-8:0.997
chr15	44061939	44062060	reg1017167.p2	7.999	+	TSC_hg19_v1_chr15_+_44038685 U42068 D16234 D83485 AB527303 CU690254 DQ893070 DQ896325	-23217	+	TSC_hg19_v1_chr15_+_44038656 AK075455	-23346	+	TSC_hg19_v1_chr15_+_44038635 NM_005313 AK075481 AK293249 BC036000 Z49835 BC071878 BC014433	-23434	+	TSC_hg19_v1_chr15_+_44069338 NM_001199877 BC009869	7306	+	NM_025165	7502	-	BC008214 NM_001018108 NM_001199875 NM_001199876 TSC_hg19_v1_chr15_+_44084335	22220	+	U42068|PDIA3|2923|protein disulfide isomerase family A, member 3##D16234|PDIA3|2923|protein disulfide isomerase family A, member 3##D83485|PDIA3|2923|protein disulfide isomerase family A, member 3##DQ893070|PDIA3|2923|protein disulfide isomerase family A, member 3##DQ896325|PDIA3|2923|protein disulfide isomerase family A, member 3##AK075455|PDIA3|2923|protein disulfide isomerase family A, member 3##NM_005313|PDIA3|2923|protein disulfide isomerase family A, member 3##AK075481|PDIA3|2923|protein disulfide isomerase family A, member 3##AK293249|PDIA3|2923|protein disulfide isomerase family A, member 3##BC036000|PDIA3|2923|protein disulfide isomerase family A, member 3##Z49835|PDIA3|2923|protein disulfide isomerase family A, member 3##BC071878|PDIA3|2923|protein disulfide isomerase family A, member 3##BC014433|PDIA3|2923|protein disulfide isomerase family A, member 3##NM_001199877|SERF2|10169|small EDRK-rich factor 2##BC009869|SERF2|10169|small EDRK-rich factor 2##NM_025165|ELL3|80237|elongation factor RNA polymerase II-like 3##BC008214|SERF2|10169|small EDRK-rich factor 2##NM_001018108|SERF2|10169|small EDRK-rich factor 2##NM_001199875|SERF2|10169|small EDRK-rich factor 2##NM_001199876|SERF2|10169|small EDRK-rich factor 2	0.792348	CTCF.p2:-2:0.792
chr20	44761388	44761514	reg1017265.p2	7.999	+	TSC_hg19_v1_chr20_+_44746952 AK222896 AJ300189 AB209660 AB590222 AX781593 AY225405 BT019901 DQ891804 DQ894988	-14486	+	TSC_hg19_v1_chr20_+_44746923 NM_001250 NM_152854 BC064518 BC012419 X60592	-14535	+	TSC_hg19_v1_chr20_-_44718581 NM_020967	-42840	-	BC136526 NM_021248	118877	-	TSC_hg19_v1_chr20_-_44937138 AK289584	175719	-	TSC_hg19_v1_chr20_-_44993030 AK300798 AF132949 AK222928 AK301022 BC021138 BC014191 AF455052 AK300207 AK315726 NM_015945 NM_173073 NM_173179	231584	-	AK222896|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AJ300189|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AB209660|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AY225405|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BT019901|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ891804|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ894988|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_001250|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_152854|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC064518|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC012419|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_020967|NCOA5|57727|nuclear receptor coactivator 5##BC136526|CDH22|64405|cadherin 22, type 2##NM_021248|CDH22|64405|cadherin 22, type 2##AK289584|CDH22|64405|cadherin 22, type 2##AK300798|SLC35C2|51006|solute carrier family 35, member C2##AF132949|SLC35C2|51006|solute carrier family 35, member C2##AK222928|SLC35C2|51006|solute carrier family 35, member C2##AK301022|SLC35C2|51006|solute carrier family 35, member C2##BC021138|SLC35C2|51006|solute carrier family 35, member C2##BC014191|SLC35C2|51006|solute carrier family 35, member C2##AF455052|SLC35C2|51006|solute carrier family 35, member C2##AK300207|SLC35C2|51006|solute carrier family 35, member C2##AK315726|SLC35C2|51006|solute carrier family 35, member C2##NM_015945|SLC35C2|51006|solute carrier family 35, member C2##NM_173073|SLC35C2|51006|solute carrier family 35, member C2##NM_173179|SLC35C2|51006|solute carrier family 35, member C2	0.998509	CTCF.p2:-10:0.999
chr3	191906154	191906255	reg1015395.p2	7.999	+	AY858112 NM_001083308	-727253	+	AK090630 AX746546 NM_198152	-857880	-	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	-859038	+	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	220639	-	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	539161	-	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	729432	-	AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2	0.994283	CTCF.p2:3:0.994
chr7	303851	304031	reg1008735.p4	7.997	+	BC040074 TSC_hg19_v1_chr7_+_193137	-110796	+	AF533706 NM_020223 TSC_hg19_v1_chr7_+_193043	-110924	+	None	None	None	NM_001195127	26194	+	TSC_hg19_v1_chr7_-_558849 AK292217	254893	-	X03795 X06374 TSC_hg19_v1_chr7_-_559093	255123	-	BC040074|FAM20C|56975|family with sequence similarity 20, member C##AF533706|FAM20C|56975|family with sequence similarity 20, member C##NM_020223|FAM20C|56975|family with sequence similarity 20, member C##NM_001195127|LOC100288524|100288524|forkhead box L1-like##AK292217|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X03795|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X06374|PDGFA|5154|platelet-derived growth factor alpha polypeptide	2.857342	CTCF.p2:25:0.620	CTCF.p2:-27:0.620	CTCF.p2:78:0.620	CTCF.p2:-80:0.997
chr10	74327788	74327889	reg1015714.p1	7.996	+	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	-44119	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	-212912	-	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	-213160	-	TSC_hg19_v1_chr10_-_74385838 BC016641 AK225695 AL117423 AK225298 AK023318	57996	-	TSC_hg19_v1_chr10_-_74385854 BC004190 BC004216	58031	-	TSC_hg19_v1_chr10_-_74385887 NM_001195518 NM_006077	58079	-	AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##BC016641|MICU1|10367|mitochondrial calcium uptake 1##AK225695|MICU1|10367|mitochondrial calcium uptake 1##AL117423|MICU1|10367|mitochondrial calcium uptake 1##AK225298|MICU1|10367|mitochondrial calcium uptake 1##AK023318|MICU1|10367|mitochondrial calcium uptake 1##BC004190|MICU1|10367|mitochondrial calcium uptake 1##BC004216|MICU1|10367|mitochondrial calcium uptake 1##NM_001195518|MICU1|10367|mitochondrial calcium uptake 1##NM_006077|MICU1|10367|mitochondrial calcium uptake 1	0.0	
chr1	210534276	210534406	reg1016835.p1	7.996	+	NM_001170580 BC051191	-31700	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	-32076	+	NM_001122834 NM_001170564 AK297193	-32745	+	AF078741 AF078742 BC113709 BC143599 TSC_hg19_v1_chr1_-_211307437 AJ001366 NM_002238 NM_172362	773044	-	TSC_hg19_v1_chr1_+_211432710 NM_001136223 NM_001136224 NM_001136225	898367	+	TSC_hg19_v1_chr1_+_211432726 AK131312	898386	+	NM_001170580|HHAT|55733|hedgehog acyltransferase##BC051191|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase##NM_001122834|HHAT|55733|hedgehog acyltransferase##NM_001170564|HHAT|55733|hedgehog acyltransferase##AK297193|HHAT|55733|hedgehog acyltransferase##AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_001136223|RCOR3|55758|REST corepressor 3##NM_001136224|RCOR3|55758|REST corepressor 3##NM_001136225|RCOR3|55758|REST corepressor 3##AK131312|RCOR3|55758|REST corepressor 3	0.858285	CTCF.p2:-6:0.858
chr8	74585385	74585499	reg1016852.p1	7.996	+	TSC_hg19_v1_chr8_+_74207135 AF456765 BC067131 AY358270	-378173	+	TSC_hg19_v1_chr8_+_74206836 NM_172037	-378633	+	CR456773 L16558 AB529035 BC071671 BC071895 BC087837 BC071894 BC001476 BC006095 X57959 AB055763 AK225246 AK225254 AK291119 AK313365 X52967 BC009599 NM_000971	-379585	-	Y19062 TSC_hg19_v1_chr8_-_74659076 AB210014 AL079285 AK002152 AK126149 AK293496 AK303104 AK314617 BC008369 BC008370	73625	-	TSC_hg19_v1_chr8_-_74659103 AK294466 CR627442 NM_001164380 NM_001164381 NM_001164382 NM_001164383 NM_001164385 NM_014393	73716	-	TSC_hg19_v1_chr8_-_74659707 AK307841 AK293729	74254	-	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)##BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)##AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)##NM_172037|RDH10|157506|retinol dehydrogenase 10 (all-trans)##CR456773|RPL7|6129|ribosomal protein L7##L16558|RPL7|6129|ribosomal protein L7##BC071671|RPL7|6129|ribosomal protein L7##BC071895|RPL7|6129|ribosomal protein L7##BC087837|RPL7|6129|ribosomal protein L7##BC071894|RPL7|6129|ribosomal protein L7##BC006095|RPL7|6129|ribosomal protein L7##X57959|RPL7|6129|ribosomal protein L7##AK225246|RPL7|6129|ribosomal protein L7##AK225254|RPL7|6129|ribosomal protein L7##AK291119|RPL7|6129|ribosomal protein L7##AK313365|RPL7|6129|ribosomal protein L7##X52967|RPL7|6129|ribosomal protein L7##BC009599|RPL7|6129|ribosomal protein L7##NM_000971|RPL7|6129|ribosomal protein L7##Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK126149|LOC729696|729696|uncharacterized LOC729696##AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	0.979621	CTCF.p2:-25:0.980
chrX	40595113	40595294	reg1016944.p1	7.996	+	TSC_hg19_v1_chrX_-_40595139 AK308871	-74	-	TSC_hg19_v1_chrX_-_40594999 AK293070	-223	-	TSC_hg19_v1_chrX_-_40594795 AB006651 AF304448 BC098377 NM_004229	-415	-	TSC_hg19_v1_chrX_+_40944880 NM_001039590 NM_001039591	349669	+	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	597447	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	598254	+	AK308871|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14##AB006651|MED14|9282|mediator complex subunit 14##AF304448|MED14|9282|mediator complex subunit 14##BC098377|MED14|9282|mediator complex subunit 14##NM_004229|MED14|9282|mediator complex subunit 14##NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked##NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	0.364252	CTCF.p2:45:0.364
chr16	84118530	84118646	reg1017373.p1	7.995	+	NM_001080442	-42827	-	TSC_hg19_v1_chr16_+_84002230 AY299331 NM_019065 BC131615 AK127376	-116376	+	NM_182981 TSC_hg19_v1_chr16_+_83986844 AK290383 AY258068 AY037158 BC020434 BC032476 BC093687 BC113417	-131704	+	TSC_hg19_v1_chr16_-_84150441 AK291773 BC114555 BC114961 AK299067	31824	-	TSC_hg19_v1_chr16_-_84150449 BC026330 D42053 NM_003791	31928	-	TSC_hg19_v1_chr16_+_84150646 BC052334	32063	+	NM_001080442|SLC38A8|146167|solute carrier family 38, member 8##AY299331|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_019065|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##BC131615|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##AK127376|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_182981|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK290383|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY258068|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY037158|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC020434|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC032476|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC093687|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC113417|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK291773|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114555|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114961|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##AK299067|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC026330|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##D42053|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##NM_003791|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC052334|LOC729887|729887|uncharacterized LOC729887	0.976914	CTCF.p2:-15:0.977
chr10	120958085	120958222	reg1016802.p1	7.994	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-19806	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-19850	-	CU687762 AY269785 TSC_hg19_v1_chr10_-_120925213 AK095295 BC063562 BC050475 NM_213649	-32966	-	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	9108	+	NM_002925	337891	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	344037	-	BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##AY269785|SFXN4|119559|sideroflexin 4##AK095295|SFXN4|119559|sideroflexin 4##BC063562|SFXN4|119559|sideroflexin 4##BC050475|SFXN4|119559|sideroflexin 4##NM_213649|SFXN4|119559|sideroflexin 4##BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10	0.449158	CTCF.p2:-20:0.449
chr10	70062083	70062199	reg1016815.p1	7.994	+	BC032621 NM_145178 AB593108 AB593109	-70280	-	NM_032578 TSC_hg19_v1_chr10_+_69869249 AK027343 BX647637 AL832002 AL834247 BC142609 BC144333 BC144334	-192803	+	TSC_hg19_v1_chr10_-_69835055 NM_015601 NM_022079	-227034	-	AK312275 AB528615 TSC_hg19_v1_chr10_-_70066624 AK092826 AX747753	4473	-	NM_012207 NM_021644 AK223441 AK291547 TSC_hg19_v1_chr10_+_70091820 BC039824 AX810704 AK295316 AF132361	29681	+	AK027673 BC009738 NM_001033083 NM_022129	30524	-	BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)##NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)##AB593108|ATOH7|220202|atonal homolog 7 (Drosophila)##AB593109|ATOH7|220202|atonal homolog 7 (Drosophila)##NM_032578|MYPN|84665|myopalladin##AK027343|MYPN|84665|myopalladin##BX647637|MYPN|84665|myopalladin##AL832002|MYPN|84665|myopalladin##AL834247|MYPN|84665|myopalladin##BC142609|MYPN|84665|myopalladin##BC144333|MYPN|84665|myopalladin##BC144334|MYPN|84665|myopalladin##NM_015601|HERC4|26091|hect domain and RLD 4##NM_022079|HERC4|26091|hect domain and RLD 4##AK312275|PBLD|64081|phenazine biosynthesis-like protein domain containing##AK092826|PBLD|64081|phenazine biosynthesis-like protein domain containing##NM_012207|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##NM_021644|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK223441|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK291547|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##BC039824|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK295316|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AF132361|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK027673|PBLD|64081|phenazine biosynthesis-like protein domain containing##BC009738|PBLD|64081|phenazine biosynthesis-like protein domain containing##NM_001033083|PBLD|64081|phenazine biosynthesis-like protein domain containing##NM_022129|PBLD|64081|phenazine biosynthesis-like protein domain containing	0.918591	CTCF.p2:5:0.919
chr1	216293082	216293186	reg1017409.p2	7.994	+	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	-552271	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	-1036524	+	NM_001017424	-1114250	+	AF055580 AY481573 NM_007123 NM_206933	303603	-	HQ692853 AF117255 BC008218 AY388456 AK291647 TSC_hg19_v1_chr1_-_216896791 AB020639 AK290945 BC064700 NM_001243515 NM_001243518 NM_001243519 NM_001438	603592	-	AY388461 NM_001243514	685574	-	BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2##AF055580|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##AY481573|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_007123|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_206933|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##HQ692853|ESRRG|2104|estrogen-related receptor gamma##AF117255|ESRRG|2104|estrogen-related receptor gamma##BC008218|ESRRG|2104|estrogen-related receptor gamma##AY388456|ESRRG|2104|estrogen-related receptor gamma##AK291647|ESRRG|2104|estrogen-related receptor gamma##AB020639|ESRRG|2104|estrogen-related receptor gamma##AK290945|ESRRG|2104|estrogen-related receptor gamma##BC064700|ESRRG|2104|estrogen-related receptor gamma##NM_001243515|ESRRG|2104|estrogen-related receptor gamma##NM_001243518|ESRRG|2104|estrogen-related receptor gamma##NM_001243519|ESRRG|2104|estrogen-related receptor gamma##NM_001438|ESRRG|2104|estrogen-related receptor gamma##AY388461|ESRRG|2104|estrogen-related receptor gamma##NM_001243514|ESRRG|2104|estrogen-related receptor gamma	0.973038	CTCF.p2:5:0.973
chr14	102701778	102701878	reg1016567.p1	7.994	+	TSC_hg19_v1_chr14_+_102606250 NM_001242414 NM_001242415 NM_001242416 NM_001242417 NM_001242418 NM_144574 NM_181291 NM_181308 BC030654 AK090580 AK225852 BC028387 AK090978 AX746714 AK297727 AL832242 AL832500 CU688486 DQ891530 DQ894719 EU831767 EU831845 AF327354 BX248274	-95618	+	TSC_hg19_v1_chr14_-_102606024 BX248761 AJ890082 AK056446 NM_001017963	-95789	-	TSC_hg19_v1_chr14_-_102553513 NM_005348	-148322	-	TSC_hg19_v1_chr14_-_102771492 AK094747 BC053536 BC026069 AK302349 AK312778 AB022694 NM_014226	69671	-	AK093342 AX748064 TSC_hg19_v1_chr14_+_102783841	81949	+	TSC_hg19_v1_chr14_+_102786095 BX248266 NM_018335	84266	+	NM_001242414|WDR20|91833|WD repeat domain 20##NM_001242415|WDR20|91833|WD repeat domain 20##NM_001242416|WDR20|91833|WD repeat domain 20##NM_001242417|WDR20|91833|WD repeat domain 20##NM_001242418|WDR20|91833|WD repeat domain 20##NM_144574|WDR20|91833|WD repeat domain 20##NM_181291|WDR20|91833|WD repeat domain 20##NM_181308|WDR20|91833|WD repeat domain 20##BC030654|WDR20|91833|WD repeat domain 20##AK090580|WDR20|91833|WD repeat domain 20##AK225852|WDR20|91833|WD repeat domain 20##BC028387|WDR20|91833|WD repeat domain 20##AK090978|WDR20|91833|WD repeat domain 20##AK297727|WDR20|91833|WD repeat domain 20##AL832242|WDR20|91833|WD repeat domain 20##AL832500|WDR20|91833|WD repeat domain 20##DQ891530|WDR20|91833|WD repeat domain 20##DQ894719|WDR20|91833|WD repeat domain 20##EU831767|WDR20|91833|WD repeat domain 20##EU831845|WDR20|91833|WD repeat domain 20##AF327354|WDR20|91833|WD repeat domain 20##BX248274|WDR20|91833|WD repeat domain 20##BX248761|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AJ890082|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK056446|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##NM_001017963|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##NM_005348|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK094747|MOK|5891|MOK protein kinase##BC053536|MOK|5891|MOK protein kinase##BC026069|MOK|5891|MOK protein kinase##AK302349|MOK|5891|MOK protein kinase##AK312778|MOK|5891|MOK protein kinase##AB022694|MOK|5891|MOK protein kinase##NM_014226|MOK|5891|MOK protein kinase##AK093342|ZNF839|55778|zinc finger protein 839##BX248266|ZNF839|55778|zinc finger protein 839##NM_018335|ZNF839|55778|zinc finger protein 839	0.840358	CTCF.p2:-5:0.840
chr17	73286215	73286363	reg1017374.p2	7.994	+	TSC_hg19_v1_chr17_-_73285501 AK075239 NM_001126121 NM_001126122 NM_021734	-760	-	BC001075 BC005120 TSC_hg19_v1_chr17_-_73285471 AL833387	-817	-	TSC_hg19_v1_chr17_-_73267265 AF225422 NM_001242498 NM_020679	-18975	-	AB385058 AF498925 CR450363 CR541942 DQ891830 DQ894923 CU674310 L29511 TSC_hg19_v1_chr17_-_73389844	103488	-	AK091010 TSC_hg19_v1_chr17_-_73401721	115355	-	TSC_hg19_v1_chr17_-_73401738 BC000631	115445	-	AK075239|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126121|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126122|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_021734|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC001075|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC005120|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AL833387|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AF225422|MIF4GD|57409|MIF4G domain containing##NM_001242498|MIF4GD|57409|MIF4G domain containing##NM_020679|MIF4GD|57409|MIF4G domain containing##AF498925|GRB2|2885|growth factor receptor-bound protein 2##CR450363|GRB2|2885|growth factor receptor-bound protein 2##CR541942|GRB2|2885|growth factor receptor-bound protein 2##DQ891830|GRB2|2885|growth factor receptor-bound protein 2##DQ894923|GRB2|2885|growth factor receptor-bound protein 2##L29511|GRB2|2885|growth factor receptor-bound protein 2##AK091010|GRB2|2885|growth factor receptor-bound protein 2##BC000631|GRB2|2885|growth factor receptor-bound protein 2	0.0	
chr1	95699622	95699780	reg1016702.p2	7.994	+	TSC_hg19_v1_chr1_-_95699509 AK090700	-179	-	BC063464 NM_001199691	-116223	+	TSC_hg19_v1_chr1_+_95582939 NM_152487 AK056404 BC137457 BC137458 BC139737	-116741	+	AK292699 NM_001128142 NM_001199682 NM_015485 TSC_hg19_v1_chr1_+_95699765 AK292665 AK296476 AL050062 BC125142 BC065813 BC010936 BC016307 AB528227 AM392773 AM393257 CR533493	47	+	AB055763 TSC_hg19_v1_chr1_-_97145197	1445495	-	NM_021190 TSC_hg19_v1_chr1_+_97187343 AK092216 AB051232 AK299755 AK299922 AB209266 AF530580 AF530581 AF176085 AK299897 BC016582 AB051233	1487583	+	BC063464|TMEM56-RWDD3|100527978|TMEM56-RWDD3 readthrough##NM_001199691|TMEM56-RWDD3|100527978|TMEM56-RWDD3 readthrough##NM_152487|TMEM56|148534|transmembrane protein 56##AK056404|TMEM56|148534|transmembrane protein 56##BC137457|TMEM56|148534|transmembrane protein 56##BC137458|TMEM56|148534|transmembrane protein 56##BC139737|TMEM56|148534|transmembrane protein 56##AK292699|RWDD3|25950|RWD domain containing 3##NM_001128142|RWDD3|25950|RWD domain containing 3##NM_001199682|RWDD3|25950|RWD domain containing 3##NM_015485|RWDD3|25950|RWD domain containing 3##AK292665|RWDD3|25950|RWD domain containing 3##AK296476|RWDD3|25950|RWD domain containing 3##AL050062|RWDD3|25950|RWD domain containing 3##BC125142|RWDD3|25950|RWD domain containing 3##BC065813|RWDD3|25950|RWD domain containing 3##BC010936|RWDD3|25950|RWD domain containing 3##BC016307|RWDD3|25950|RWD domain containing 3##AM392773|RWDD3|25950|RWD domain containing 3##AM393257|RWDD3|25950|RWD domain containing 3##CR533493|RWDD3|25950|RWD domain containing 3##NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2##AK092216|PTBP2|58155|polypyrimidine tract binding protein 2##AB051232|PTBP2|58155|polypyrimidine tract binding protein 2##AK299755|PTBP2|58155|polypyrimidine tract binding protein 2##AK299922|PTBP2|58155|polypyrimidine tract binding protein 2##AB209266|PTBP2|58155|polypyrimidine tract binding protein 2##AF530580|PTBP2|58155|polypyrimidine tract binding protein 2##AF530581|PTBP2|58155|polypyrimidine tract binding protein 2##AF176085|PTBP2|58155|polypyrimidine tract binding protein 2##AK299897|PTBP2|58155|polypyrimidine tract binding protein 2##BC016582|PTBP2|58155|polypyrimidine tract binding protein 2##AB051233|PTBP2|58155|polypyrimidine tract binding protein 2	0.888969	CTCF.p2:-3:0.889
chr5	30401704	30401829	reg1017673.p1	7.994	+	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	-2929363	+	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	-3363095	-	NM_006727	-5756682	-	NM_004932 TSC_hg19_v1_chr5_+_31193792 AK291290	792030	+	TSC_hg19_v1_chr5_+_31193875 BC000019 AK024238	792111	+	TSC_hg19_v1_chr5_-_31532201 AK308093 AF189011 BC054003 BX647724 NM_001100412 NM_013235	1130456	-	BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK308093|DROSHA|29102|drosha, ribonuclease type III##AF189011|DROSHA|29102|drosha, ribonuclease type III##BC054003|DROSHA|29102|drosha, ribonuclease type III##BX647724|DROSHA|29102|drosha, ribonuclease type III##NM_001100412|DROSHA|29102|drosha, ribonuclease type III##NM_013235|DROSHA|29102|drosha, ribonuclease type III	0.988045	CTCF.p2:20:0.988
chr9	4366860	4366991	reg1016436.p1	7.994	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-66894	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-66962	-	TSC_hg19_v1_chr9_-_4299574 DQ438882 DQ438887 DQ438892 DQ438899 DQ438902	-67342	-	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	123512	+	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	295386	+	AK295831 NM_001039395	299744	-	AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##DQ438882|GLIS3|169792|GLIS family zinc finger 3##DQ438887|GLIS3|169792|GLIS family zinc finger 3##DQ438892|GLIS3|169792|GLIS family zinc finger 3##DQ438899|GLIS3|169792|GLIS family zinc finger 3##DQ438902|GLIS3|169792|GLIS family zinc finger 3##NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68	0.992021	CTCF.p2:-5:0.992
chr12	122393812	122393921	reg1016196.p2	7.993	+	TSC_hg19_v1_chr12_+_122356497 NM_001178003 NM_144668 BC028421 BC036233	-37385	+	TSC_hg19_v1_chr12_+_122326731 AB003177 NM_002813 AK315389 BC002383 BC004184 BC004213 DQ893594 EU831432 EU831524 AB528684	-67171	+	AK057510 NM_001171993	-67350	-	AK296159 TSC_hg19_v1_chr12_+_122459903 NM_001024808 NM_020993 AK316486 BC113627 BC094723 HQ258124 AB590498	66027	+	TSC_hg19_v1_chr12_+_122516655 BC151841 NM_014938	122741	+	TSC_hg19_v1_chr12_+_122516682 AF312918	122851	+	NM_001178003|WDR66|144406|WD repeat domain 66##NM_144668|WDR66|144406|WD repeat domain 66##BC028421|WDR66|144406|WD repeat domain 66##BC036233|WDR66|144406|WD repeat domain 66##NM_002813|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK315389|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC002383|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004184|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004213|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##DQ893594|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831432|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831524|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK057510|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_001171993|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##AK296159|BCL7A|605|B-cell CLL/lymphoma 7A##NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A##NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A##AK316486|BCL7A|605|B-cell CLL/lymphoma 7A##BC113627|BCL7A|605|B-cell CLL/lymphoma 7A##BC094723|BCL7A|605|B-cell CLL/lymphoma 7A##HQ258124|BCL7A|605|B-cell CLL/lymphoma 7A##BC151841|MLXIP|22877|MLX interacting protein##NM_014938|MLXIP|22877|MLX interacting protein##AF312918|MLXIP|22877|MLX interacting protein	0.997594	CTCF.p2:-15:0.998
chr4	146538178	146538314	reg1017625.p2	7.993	+	U59912 NM_001003688 U54826 AK293055	-134288	+	TSC_hg19_v1_chr4_+_146403004 U59423 NM_005900 BC001878	-135364	+	AK302581 NM_001102653	-437434	-	TSC_hg19_v1_chr4_+_146540536 AK126662 NM_172250	2300	+	NM_001080531	63109	+	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	321431	-	U59912|SMAD1|4086|SMAD family member 1##NM_001003688|SMAD1|4086|SMAD family member 1##U54826|SMAD1|4086|SMAD family member 1##AK293055|SMAD1|4086|SMAD family member 1##U59423|SMAD1|4086|SMAD family member 1##NM_005900|SMAD1|4086|SMAD family member 1##BC001878|SMAD1|4086|SMAD family member 1##AK302581|OTUD4|54726|OTU domain containing 4##NM_001102653|OTUD4|54726|OTU domain containing 4##AK126662|MMAA|166785|methylmalonic aciduria (cobalamin deficiency) cblA type##NM_172250|MMAA|166785|methylmalonic aciduria (cobalamin deficiency) cblA type##NM_001080531|C4orf51|646603|chromosome 4 open reading frame 51##AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827	0.998422	CTCF.p2:-6:0.998
chr11	57016652	57016754	reg1002796.p1	7.992	+	AK075252 BC032688 AK315542 AK074514 X89271 NM_005161	-11903	-	AK127591 NM_001005210 BC136737 BC136739 BC150572	-67404	+	BC137198 NM_001005323	-260336	+	AF441771 TSC_hg19_v1_chr11_-_57089790	73043	-	TSC_hg19_v1_chr11_-_57092425 AB051528 BC150333 NM_033396 AK124903	75672	-	AB209132 BC091486 TSC_hg19_v1_chr11_-_57103354 M86737 NM_003146	86646	-	AK075252|APLNR|187|apelin receptor##BC032688|APLNR|187|apelin receptor##AK315542|APLNR|187|apelin receptor##AK074514|APLNR|187|apelin receptor##X89271|APLNR|187|apelin receptor##NM_005161|APLNR|187|apelin receptor##AK127591|LRRC55|219527|leucine rich repeat containing 55##NM_001005210|LRRC55|219527|leucine rich repeat containing 55##BC136737|LRRC55|219527|leucine rich repeat containing 55##BC136739|LRRC55|219527|leucine rich repeat containing 55##BC150572|LRRC55|219527|leucine rich repeat containing 55##BC137198|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##NM_001005323|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##AF441771|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AB051528|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##BC150333|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##NM_033396|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AK124903|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AB209132|SSRP1|6749|structure specific recognition protein 1##BC091486|SSRP1|6749|structure specific recognition protein 1##M86737|SSRP1|6749|structure specific recognition protein 1##NM_003146|SSRP1|6749|structure specific recognition protein 1	0.987322	CTCF.p2:-4:0.987
chr14	62629841	62629982	reg1019084.p1	7.992	+	TSC_hg19_v1_chr14_+_62584125 BX248751	-45753	+	AJ617628 NM_031914 BC117363 BC143598 HQ258344 AB102949	-167273	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	-400792	+	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	882018	-	AK074484 NM_172376	938672	-	NM_020663 AF087862 AK027351 AK027278 BC062575 AB209218 AF309563	1041270	+	BX248751|FLJ43390|646113|uncharacterized LOC646113##AJ617628|SYT16|83851|synaptotagmin XVI##NM_031914|SYT16|83851|synaptotagmin XVI##BC117363|SYT16|83851|synaptotagmin XVI##BC143598|SYT16|83851|synaptotagmin XVI##HQ258344|SYT16|83851|synaptotagmin XVI##AB102949|SYT16|83851|synaptotagmin XVI##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AK074484|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172376|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_020663|RHOJ|57381|ras homolog gene family, member J##AF087862|RHOJ|57381|ras homolog gene family, member J##AK027351|RHOJ|57381|ras homolog gene family, member J##AK027278|RHOJ|57381|ras homolog gene family, member J##BC062575|RHOJ|57381|ras homolog gene family, member J##AB209218|RHOJ|57381|ras homolog gene family, member J##AF309563|RHOJ|57381|ras homolog gene family, member J	0.327513	CTCF.p2:-16:0.328
chr14	65138365	65138492	reg1017592.p1	7.992	+	TSC_hg19_v1_chr14_+_65016678 AK058044 NM_172365 BC068989	-121783	+	TSC_hg19_v1_chr14_+_65007458 AK097824 BC036107 BC034365 AB527255 BT009815 CU674866 DQ892538 DQ895749	-130936	+	TSC_hg19_v1_chr14_+_65007187 NM_021979	-131194	+	TSC_hg19_v1_chr14_+_65171178 BX248779 NM_015549	32744	+	TSC_hg19_v1_chr14_+_65171243 BC129952 BC129953	32850	+	AB384944 BC136284 BC136285 NM_000347 NM_001024858	151410	-	AK058044|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##NM_172365|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##BC068989|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##AK097824|HSPA2|3306|heat shock 70kDa protein 2##BC036107|HSPA2|3306|heat shock 70kDa protein 2##BC034365|HSPA2|3306|heat shock 70kDa protein 2##BT009815|HSPA2|3306|heat shock 70kDa protein 2##DQ892538|HSPA2|3306|heat shock 70kDa protein 2##DQ895749|HSPA2|3306|heat shock 70kDa protein 2##NM_021979|HSPA2|3306|heat shock 70kDa protein 2##BX248779|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##NM_015549|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BC129952|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BC129953|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BC136284|SPTB|6710|spectrin, beta, erythrocytic##BC136285|SPTB|6710|spectrin, beta, erythrocytic##NM_000347|SPTB|6710|spectrin, beta, erythrocytic##NM_001024858|SPTB|6710|spectrin, beta, erythrocytic	0.96687	CTCF.p2:-3:0.967
chr22	20001073	20001169	reg1015026.p1	7.992	+	AB462972 BT007125 CR456997 CU012983 CU013271 CU680120 DQ893411 DQ896732 FJ410132 TSC_hg19_v1_chr22_+_19950078 NM_007310 EF217321 EF217322 EF212883 FJ410131 CU674210	-50939	+	NM_001135162 BC100018	-62073	+	NM_001135161 AK129492	-62605	+	TSC_hg19_v1_chr22_-_20004347 NM_001670 U51269	3202	-	TSC_hg19_v1_chr22_+_20008632 AK316056 BC041339 NM_152906 AK301054 AK301366 AK311676	7496	+	AK297922 AK298593 TSC_hg19_v1_chr22_+_20008634 AK297075 AK316020 AK092484 AX747566 CR627452	7522	+	BT007125|COMT|1312|catechol-O-methyltransferase##CR456997|COMT|1312|catechol-O-methyltransferase##CU012983|COMT|1312|catechol-O-methyltransferase##CU013271|COMT|1312|catechol-O-methyltransferase##DQ893411|COMT|1312|catechol-O-methyltransferase##DQ896732|COMT|1312|catechol-O-methyltransferase##FJ410132|COMT|1312|catechol-O-methyltransferase##NM_007310|COMT|1312|catechol-O-methyltransferase##EF217321|COMT|1312|catechol-O-methyltransferase##EF217322|COMT|1312|catechol-O-methyltransferase##FJ410131|COMT|1312|catechol-O-methyltransferase##NM_001135162|COMT|1312|catechol-O-methyltransferase##BC100018|COMT|1312|catechol-O-methyltransferase##NM_001135161|COMT|1312|catechol-O-methyltransferase##NM_001670|ARVCF|421|armadillo repeat gene deleted in velocardiofacial syndrome##U51269|ARVCF|421|armadillo repeat gene deleted in velocardiofacial syndrome##AK316056|C22orf25|128989|chromosome 22 open reading frame 25##BC041339|C22orf25|128989|chromosome 22 open reading frame 25##NM_152906|C22orf25|128989|chromosome 22 open reading frame 25##AK301054|C22orf25|128989|chromosome 22 open reading frame 25##AK301366|C22orf25|128989|chromosome 22 open reading frame 25##AK311676|C22orf25|128989|chromosome 22 open reading frame 25##AK297922|C22orf25|128989|chromosome 22 open reading frame 25##AK298593|C22orf25|128989|chromosome 22 open reading frame 25##AK297075|C22orf25|128989|chromosome 22 open reading frame 25##AK316020|C22orf25|128989|chromosome 22 open reading frame 25##AK092484|C22orf25|128989|chromosome 22 open reading frame 25##CR627452|C22orf25|128989|chromosome 22 open reading frame 25	0.999311	CTCF.p2:0:0.999
chr5	36693374	36693479	reg1015698.p1	7.992	+	NM_001166695 U03504 AB529121 AY954110 TSC_hg19_v1_chr5_+_36608562	-84930	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	-86698	+	NM_001166696 NM_004172	-86970	+	TSC_hg19_v1_chr5_-_36876762 AK000901	183337	-	TSC_hg19_v1_chr5_+_36876875 NM_015384 NM_133433 AJ627032 AJ640137	183438	+	TSC_hg19_v1_chr5_+_36876945 BC146821 BX640644 BC131490 AK290347 BX538178 BX538177	183644	+	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK000901|LOC646719|646719|uncharacterized LOC646719##NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)##NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)##BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)##BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)##BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)##AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)	0.901065	CTCF.p2:1:0.901
chrX	54918166	54918299	reg1016591.p2	7.992	+	NM_201222 BX647995 TSC_hg19_v1_chrX_+_54835530	-82719	+	TSC_hg19_v1_chrX_+_54834810 NM_014599 AK098645 BC000304 AK301599	-83425	+	TSC_hg19_v1_chrX_+_54834177 NM_177433 AK297910 AK092463 AX747558 AF126181 AF128527 AF128528 AK301821 U92544 BC091503	-84076	+	AK299568 AF349719 AF349720 AF349721 AF349722 NM_001039705 NM_016157 NM_177556 AK027489 AK296329 BC026914 AB029037 TSC_hg19_v1_chrX_+_54947283 AK225841	29025	+	BC096077 BC096078 BC096079 NM_002625 X52638	102278	-	TSC_hg19_v1_chrX_+_55026795 NM_014481 AF119046 AJ011311 AB021260 AK301555 AK316186 BC002959 BC007669 AB049211 AB463412 DQ893669 DQ895556	108585	+	NM_201222|MAGED2|10916|melanoma antigen family D, 2##BX647995|MAGED2|10916|melanoma antigen family D, 2##NM_014599|MAGED2|10916|melanoma antigen family D, 2##AK098645|MAGED2|10916|melanoma antigen family D, 2##BC000304|MAGED2|10916|melanoma antigen family D, 2##AK301599|MAGED2|10916|melanoma antigen family D, 2##NM_177433|MAGED2|10916|melanoma antigen family D, 2##AK297910|MAGED2|10916|melanoma antigen family D, 2##AK092463|MAGED2|10916|melanoma antigen family D, 2##AF126181|MAGED2|10916|melanoma antigen family D, 2##AF128527|MAGED2|10916|melanoma antigen family D, 2##AF128528|MAGED2|10916|melanoma antigen family D, 2##AK301821|MAGED2|10916|melanoma antigen family D, 2##U92544|MAGED2|10916|melanoma antigen family D, 2##BC091503|MAGED2|10916|melanoma antigen family D, 2##AK299568|TRO|7216|trophinin##AF349719|TRO|7216|trophinin##AF349720|TRO|7216|trophinin##AF349721|TRO|7216|trophinin##AF349722|TRO|7216|trophinin##NM_001039705|TRO|7216|trophinin##NM_016157|TRO|7216|trophinin##NM_177556|TRO|7216|trophinin##AK027489|TRO|7216|trophinin##AK296329|TRO|7216|trophinin##BC026914|TRO|7216|trophinin##AB029037|TRO|7216|trophinin##AK225841|TRO|7216|trophinin##BC096077|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##BC096078|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##BC096079|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##NM_002625|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##X52638|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##NM_014481|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AF119046|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AJ011311|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AB021260|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AK301555|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AK316186|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##BC002959|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AB049211|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##DQ893669|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##DQ895556|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2	0.996913	CTCF.p2:-21:0.997
chr12	103890219	103890350	reg1000900.p3	7.991	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	-538	-	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-538192	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-538763	+	AY311388 AJ295695 NM_017564 AB052958	90777	+	AB032773 TSC_hg19_v1_chr12_-_104234857	344540	-	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	344695	-	AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3	0.0	
chr7	17720648	17720767	reg1016352.p2	7.991	+	TSC_hg19_v1_chr7_+_17382906 BC021696	-337801	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	-382438	+	AY359065 BC058284 NM_176813	-799103	-	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	259342	-	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	259420	-	BC062797 BC005309 M57423 NM_175886	346758	-	BC021696|AHR|196|aryl hydrocarbon receptor##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13##AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1	0.997492	CTCF.p2:-18:0.997
chr12	18293083	18293201	reg1016243.p1	7.990	+	AK026308 BC042888 NM_024730	-50060	-	AF258348 BC017777 AB044746 AK095595 AK308826 NM_001001395 NM_001243609	-1532101	-	AK308594 AK294909 NM_001243613	-1533131	-	NM_004570	121331	+	AF532185 NM_033123 AK314516 AY035866 AK292279	597811	-	BC016745 NM_033328 AB053259 AK058174 CU677705	597978	+	AK026308|RERGL|79785|RERG/RAS-like##BC042888|RERGL|79785|RERG/RAS-like##NM_024730|RERGL|79785|RERG/RAS-like##AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1##BC016745|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##NM_033328|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AB053259|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AK058174|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	0.810002	CTCF.p2:-26:0.810
chr13	96881736	96881871	reg1018804.p1	7.990	+	AF539426 NM_153456	-138711	+	CU688350 TSC_hg19_v1_chr13_-_96705666 BC125233 BC125234 AF227906 BC017759 BC067807 BC111021 AK001735 BC032302 NM_020121	-176153	-	TSC_hg19_v1_chr13_+_96329409 BC047936 BC020215 BC033823 AB384852 CU690538	-552345	+	AK122639 NM_080818 AK313684	764809	-	TSC_hg19_v1_chr13_+_97794087 CR749802	912279	+	TSC_hg19_v1_chr13_+_97874586 AK074610 NM_144778 NM_207304 AK291727 AF061261 AF491866 BC032426 BC104038 BC104039 BC104040 AK315844	992792	+	AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##BC125233|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC125234|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF227906|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC017759|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC067807|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC111021|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AK001735|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC032302|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##NM_020121|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC047936|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##BC033823|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##AK122639|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##NM_080818|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AK313684|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_144778|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_207304|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK291727|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF061261|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF491866|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC032426|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104038|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104039|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104040|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK315844|MBNL2|10150|muscleblind-like 2 (Drosophila)	0.460991	CTCF.p2:-12:0.461
chr3	69969297	69969396	reg1017309.p1	7.990	+	NM_198177 AB006989 AK297858	-53945	+	AB006988 NM_006722	-156385	+	TSC_hg19_v1_chr3_+_69812620 AK296129 NM_001184967	-156683	+	NM_000248 NM_001184968 NM_198158 NM_198178 Z29678 BC012503 BC065243 BC026961 GU355676	16465	+	TSC_hg19_v1_chr3_+_70048883 BC015590	79542	+	TSC_hg19_v1_chr3_-_71114076 AK074569 NM_001244813	1144850	-	NM_198177|MITF|4286|microphthalmia-associated transcription factor##AB006989|MITF|4286|microphthalmia-associated transcription factor##AK297858|MITF|4286|microphthalmia-associated transcription factor##AB006988|MITF|4286|microphthalmia-associated transcription factor##NM_006722|MITF|4286|microphthalmia-associated transcription factor##AK296129|MITF|4286|microphthalmia-associated transcription factor##NM_001184967|MITF|4286|microphthalmia-associated transcription factor##NM_000248|MITF|4286|microphthalmia-associated transcription factor##NM_001184968|MITF|4286|microphthalmia-associated transcription factor##NM_198158|MITF|4286|microphthalmia-associated transcription factor##NM_198178|MITF|4286|microphthalmia-associated transcription factor##Z29678|MITF|4286|microphthalmia-associated transcription factor##BC012503|MITF|4286|microphthalmia-associated transcription factor##BC065243|MITF|4286|microphthalmia-associated transcription factor##BC026961|MITF|4286|microphthalmia-associated transcription factor##GU355676|MITF|4286|microphthalmia-associated transcription factor##AK074569|FOXP1|27086|forkhead box P1##NM_001244813|FOXP1|27086|forkhead box P1	0.830068	CTCF.p2:-13:0.830
chr7	44254061	44254216	reg1017293.p1	7.990	+	TSC_hg19_v1_chr7_+_44240639 BC007319 AF091079 U95735 DQ890653 DQ893833 CU675611 AB451317 AB451447 BT007078 CR456989 CR542008	-13452	+	TSC_hg19_v1_chr7_+_44240631 AK223488	-13518	+	TSC_hg19_v1_chr7_+_44240576 NM_006555 AK312622	-13560	+	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	111153	-	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	276143	-	AY437865 AY515256 FJ481111 TSC_hg19_v1_chr7_-_44580901 BC117178 BC143731 BC143756 AF192522 AF192523 NM_001101648 NM_013389	326747	-	BC007319|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AF091079|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##U95735|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ890653|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ893833|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451317|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451447|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BT007078|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR456989|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR542008|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK223488|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##NM_006555|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK312622|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3##AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	0.153481	
chr11	81369884	81370021	reg1019625.p1	7.989	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-2218228	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-3084057	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-3084160	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	1074946	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	1241565	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	1242822	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.59704	CTCF.p2:-11:0.597
chr16	87670134	87670248	reg1016867.p2	7.989	+	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	-33481	+	TSC_hg19_v1_chr16_+_87636574 AB042636	-33613	+	AB593088 TSC_hg19_v1_chr16_+_87636492 NM_020655 BC036533	-33690	+	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	129324	-	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	129379	-	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	232884	-	DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3##AB042636|JPH3|57338|junctophilin 3##NM_020655|JPH3|57338|junctophilin 3##BC036533|JPH3|57338|junctophilin 3##BC001044|KLHDC4|54758|kelch domain containing 4##BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5	0.966131	CTCF.p2:-4:0.966
chr1	76374427	76374558	reg1015836.p1	7.989	+	NM_002440 BC033030 U89293 AF104243 AB528458 CU689598 DQ891259 DQ894445	-111880	+	AK293057 AK128861 BC020790 NM_004582 TSC_hg19_v1_chr1_+_76251940	-122579	+	AK312629 TSC_hg19_v1_chr1_+_76190445 AK296045 AK311022 M16827 AF251043 DQ892341 DQ895710 CU675151	-184036	+	AF403035 CU691378 BC022517 AF429968 BC036573 AK098606 NM_080868	23553	-	TSC_hg19_v1_chr1_+_76540430 NM_001160011 NM_152996 AK091215 AX746855 BC059363 AK297363 AY358540 AJ507291 CU691350	165970	+	TSC_hg19_v1_chr1_+_77165439 D28460	790948	+	NM_002440|MSH4|4438|mutS homolog 4 (E. coli)##BC033030|MSH4|4438|mutS homolog 4 (E. coli)##U89293|MSH4|4438|mutS homolog 4 (E. coli)##AF104243|MSH4|4438|mutS homolog 4 (E. coli)##DQ891259|MSH4|4438|mutS homolog 4 (E. coli)##DQ894445|MSH4|4438|mutS homolog 4 (E. coli)##AK293057|RABGGTB|5876|Rab geranylgeranyltransferase, beta subunit##AK128861|RABGGTB|5876|Rab geranylgeranyltransferase, beta subunit##BC020790|RABGGTB|5876|Rab geranylgeranyltransferase, beta subunit##NM_004582|RABGGTB|5876|Rab geranylgeranyltransferase, beta subunit##AK312629|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AK296045|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AK311022|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##M16827|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AF251043|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##DQ892341|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##DQ895710|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17##AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17##AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##D28460|TPI1|7167|triosephosphate isomerase 1	0.339401	CTCF.p2:-1:0.339
chr19	56320959	56321080	reg1016822.p1	7.989	+	NM_001145014	-50513	+	AY154464 BC136583 NM_176820	-71266	-	AF073727 NM_001130071	-133029	+	AK315003 NM_134444	26924	+	BC036506 NM_145007 AK097646	27127	-	AB527194 AY154468 NM_176810	122669	-	NM_001145014|RFPL4A|342931|ret finger protein-like 4A##AY154464|NLRP9|338321|NLR family, pyrin domain containing 9##BC136583|NLRP9|338321|NLR family, pyrin domain containing 9##NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9##AF073727|EPN1|29924|epsin 1##NM_001130071|EPN1|29924|epsin 1##AK315003|NLRP4|147945|NLR family, pyrin domain containing 4##NM_134444|NLRP4|147945|NLR family, pyrin domain containing 4##BC036506|NLRP11|204801|NLR family, pyrin domain containing 11##NM_145007|NLRP11|204801|NLR family, pyrin domain containing 11##AY154468|NLRP13|126204|NLR family, pyrin domain containing 13##NM_176810|NLRP13|126204|NLR family, pyrin domain containing 13	0.827802	CTCF.p2:6:0.828
chr20	8024455	8024606	reg1017304.p1	7.989	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-24058	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-24123	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	-24230	-	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	88500	+	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	1025153	+	AK307482 TSC_hg19_v1_chr20_+_9049806	1025268	+	AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4	0.98377	CTCF.p2:3:0.984
chr7	129016440	129016569	reg1017007.p1	7.989	+	AK316073 NM_001130722	-1021	+	TSC_hg19_v1_chr7_+_129008062 AK025372	-8416	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	-8518	+	TSC_hg19_v1_chr7_+_129074283 NM_001134336 NM_020704 AK290165 BC019064 AB032996 CU676366 AB463039 AM392619 AM392944 AM392960 AM393447	57769	+	BC050400 NM_001195243 BC035417	125860	+	TSC_hg19_v1_chr7_-_129251474 AK123679	234974	-	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001134336|FAM40B|57464|family with sequence similarity 40, member B##NM_020704|FAM40B|57464|family with sequence similarity 40, member B##AK290165|FAM40B|57464|family with sequence similarity 40, member B##BC019064|FAM40B|57464|family with sequence similarity 40, member B##AB032996|FAM40B|57464|family with sequence similarity 40, member B##AM392619|FAM40B|57464|family with sequence similarity 40, member B##AM392944|FAM40B|57464|family with sequence similarity 40, member B##AM392960|FAM40B|57464|family with sequence similarity 40, member B##AM393447|FAM40B|57464|family with sequence similarity 40, member B##BC050400|LOC100287482|100287482|uncharacterized LOC100287482##NM_001195243|LOC100287482|100287482|uncharacterized LOC100287482##BC035417|LOC100287482|100287482|uncharacterized LOC100287482	0.682688	CTCF.p2:6:0.683
chr7	134671402	134671539	reg1015528.p2	7.989	+	TSC_hg19_v1_chr7_+_134671258 AK302827 NM_178563 BC030651 AL832281 AK023045 AK311252	-185	+	BC014035 TSC_hg19_v1_chr7_+_134576197 BC061926 BC005006 D90452 D90453	-95197	+	NM_033139 NM_033140 TSC_hg19_v1_chr7_+_134576161	-95315	+	NM_018295 TSC_hg19_v1_chr7_+_134832838 AK001862 AK225055 AK301268 BC020942	161377	+	NM_001243753 NM_001243755	182755	-	TSC_hg19_v1_chr7_-_134855252 NM_001243752	183797	-	AK302827|AGBL3|340351|ATP/GTP binding protein-like 3##NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3##BC030651|AGBL3|340351|ATP/GTP binding protein-like 3##AL832281|AGBL3|340351|ATP/GTP binding protein-like 3##AK023045|AGBL3|340351|ATP/GTP binding protein-like 3##BC014035|CALD1|800|caldesmon 1##BC061926|CALD1|800|caldesmon 1##BC005006|CALD1|800|caldesmon 1##D90452|CALD1|800|caldesmon 1##D90453|CALD1|800|caldesmon 1##NM_033139|CALD1|800|caldesmon 1##NM_033140|CALD1|800|caldesmon 1##NM_018295|TMEM140|55281|transmembrane protein 140##AK001862|TMEM140|55281|transmembrane protein 140##AK225055|TMEM140|55281|transmembrane protein 140##AK301268|TMEM140|55281|transmembrane protein 140##BC020942|TMEM140|55281|transmembrane protein 140##NM_001243753|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243755|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243752|C7orf49|78996|chromosome 7 open reading frame 49	0.744948	CTCF.p2:10:0.745
chr9	117068224	117068332	reg1016875.p2	7.988	+	TSC_hg19_v1_chr9_+_116930778 AB058773	-137446	+	AY149237 NM_032888	-150048	+	TSC_hg19_v1_chr9_+_116917816 BC035728	-150467	+	NM_000607 X02544 AK316207 AK312035 BC026238 BC007032 BC104818 BC104820 BC143313 BC143314 M13692 AB463987 BT019790 CU693168	17079	+	NM_000608 AK312226 BC015964 BC056239 AK303760 CR456930 CU677539	23848	+	BC042202 TSC_hg19_v1_chr9_-_117111294	43011	-	AB058773|COL27A1|85301|collagen, type XXVII, alpha 1##AY149237|COL27A1|85301|collagen, type XXVII, alpha 1##NM_032888|COL27A1|85301|collagen, type XXVII, alpha 1##BC035728|COL27A1|85301|collagen, type XXVII, alpha 1##NM_000607|ORM1|5004|orosomucoid 1##X02544|ORM1|5004|orosomucoid 1##AK316207|ORM1|5004|orosomucoid 1##AK312035|ORM1|5004|orosomucoid 1##BC026238|ORM1|5004|orosomucoid 1##BC007032|ORM1|5004|orosomucoid 1##BC104818|ORM1|5004|orosomucoid 1##BC104820|ORM1|5004|orosomucoid 1##BC143313|ORM1|5004|orosomucoid 1##BC143314|ORM1|5004|orosomucoid 1##M13692|ORM1|5004|orosomucoid 1##BT019790|ORM1|5004|orosomucoid 1##NM_000608|ORM2|5005|orosomucoid 2##AK312226|ORM2|5005|orosomucoid 2##BC015964|ORM2|5005|orosomucoid 2##BC056239|ORM2|5005|orosomucoid 2##AK303760|ORM2|5005|orosomucoid 2##CR456930|ORM2|5005|orosomucoid 2##BC042202|AKNA|80709|AT-hook transcription factor	0.997074	CTCF.p2:13:0.997
chr9	117669348	117669496	reg1019793.p1	7.988	+	AB590753 AK291642 BC074940 BC074941 BC069435 AK313721 BC104462 BC104463 NM_005118 AF520785	-101071	-	AY434464 NM_001204344	-114613	-	NM_001199233	-225054	-	AK313619 NM_001244 NM_001252290	23452	-	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	211051	-	AB022761 NM_017418	234674	+	AK291642|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074940|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074941|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC069435|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313721|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104462|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104463|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_005118|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AF520785|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AY434464|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001204344|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001199233|LOC100505478|100505478|uncharacterized LOC100505478##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1	0.881284	CTCF.p2:26:0.881
chr10	102063591	102063727	reg1016769.p1	7.987	+	AY531265 AB463442 TSC_hg19_v1_chr10_-_102046438 AB593084 AK298969 NM_173809	-17221	-	BC020494 AY278457 AK054697 NM_001001342	-17629	-	AL832515 CU679081 AK023984 BC008746 AK001860 AK225590 TSC_hg19_v1_chr10_-_102027422 AK295303 AK097895 NM_018294	-36273	-	AF073481 NM_001253837 NM_016112	26583	-	NM_005063 TSC_hg19_v1_chr10_+_102106877 AB032261 BC062303	43182	+	TSC_hg19_v1_chr10_+_102106989 AK312312	43316	+	AY531265|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AB593084|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AK298969|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_173809|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AL832515|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##AK023984|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##BC008746|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##AK001860|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##AK225590|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##AK295303|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##AK097895|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##NM_018294|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##AF073481|PKD2L1|9033|polycystic kidney disease 2-like 1##NM_001253837|PKD2L1|9033|polycystic kidney disease 2-like 1##NM_016112|PKD2L1|9033|polycystic kidney disease 2-like 1##NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AK312312|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	0.994699	CTCF.p2:5:0.995
chr22	42508946	42509060	reg1017386.p2	7.987	+	TSC_hg19_v1_chr22_+_42486980 AK123630 BC039542	-21977	+	TSC_hg19_v1_chr22_-_42486777 AB528478 CU013129 CU013417 CR456529 NM_002490	-22177	-	TSC_hg19_v1_chr22_-_42486764 CR456714 CR541997 CU678184 DQ892966 DQ896214 BC002772 AF047182 AK316562 AK291874	-22251	-	AB463001 CU013213 CU013501 M20403 X08006 BC066877 BC067432 TSC_hg19_v1_chr22_-_42526809 BC106757 BC106758 BC126858 CR456430 BC075023 BC075024	17804	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	17878	-	AB527391 NM_005650 NM_181492	102374	-	AK123630|LOC100132273|100132273|uncharacterized LOC100132273##BC039542|LOC100132273|100132273|uncharacterized LOC100132273##CU013129|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CU013417|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR456529|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##NM_002490|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR456714|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR541997|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##DQ892966|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##DQ896214|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##BC002772|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##AF047182|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##AK316562|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##AK291874|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CU013213|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013501|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##M20403|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##X08006|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC066877|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC067432|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106757|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106758|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC126858|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CR456430|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075023|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075024|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)	0.924265	CTCF.p2:-6:0.924
chr3	42270378	42270502	reg1017918.p1	7.987	+	TSC_hg19_v1_chr3_+_42201684 BX647199 NM_014965 BC015922 AK000754 AM392573 AM393596 CU677507 EU446989	-68685	+	AL713787 TSC_hg19_v1_chr3_+_42190865	-79593	+	TSC_hg19_v1_chr3_+_42190749 AK294221	-79692	+	BC008283 NM_001174138	34998	-	BC111026 NM_000729	37221	-	AF326749 BC016747 NM_144634	181603	-	BX647199|TRAK1|22906|trafficking protein, kinesin binding 1##NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1##BC015922|TRAK1|22906|trafficking protein, kinesin binding 1##AK000754|TRAK1|22906|trafficking protein, kinesin binding 1##AM392573|TRAK1|22906|trafficking protein, kinesin binding 1##AM393596|TRAK1|22906|trafficking protein, kinesin binding 1##EU446989|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##BC008283|CCK|885|cholecystokinin##NM_001174138|CCK|885|cholecystokinin##BC111026|CCK|885|cholecystokinin##NM_000729|CCK|885|cholecystokinin##AF326749|LYZL4|131375|lysozyme-like 4##BC016747|LYZL4|131375|lysozyme-like 4##NM_144634|LYZL4|131375|lysozyme-like 4	0.798913	CTCF.p2:2:0.799
chrX	115057252	115057386	reg1016402.p1	7.987	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-229451	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-260277	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-261713	+	BC003645 TSC_hg19_v1_chrX_-_115085443	28120	-	AK313927 NM_000686 X87723 U16957	244676	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	510448	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.545846	CTCF.p2:55:0.546
chr14	73975457	73975605	reg1015777.p1	7.986	+	TSC_hg19_v1_chr14_+_73957687 BC071954	-17839	+	TSC_hg19_v1_chr14_+_73957674 AY390535	-17858	+	TSC_hg19_v1_chr14_+_73957669 AK299994 AK025455 BC011350	-17868	+	BX161396 AK300886 DQ082754 NM_001037161 BC127747 BC127748 BC143042 BC132889 BC132891 BC144425 GU727640	28440	+	AK093515 AX748177 BC047590 NM_001220484 NM_203309	50115	-	AK001939 DQ082755 AK223635 NM_006821 BC006335 TSC_hg19_v1_chr14_+_74035788	60244	+	BC071954|C14orf169|79697|chromosome 14 open reading frame 169##AY390535|C14orf169|79697|chromosome 14 open reading frame 169##AK299994|C14orf169|79697|chromosome 14 open reading frame 169##AK025455|C14orf169|79697|chromosome 14 open reading frame 169##BC011350|C14orf169|79697|chromosome 14 open reading frame 169##BX161396|ACOT1|641371|acyl-CoA thioesterase 1##AK300886|ACOT1|641371|acyl-CoA thioesterase 1##DQ082754|ACOT1|641371|acyl-CoA thioesterase 1##NM_001037161|ACOT1|641371|acyl-CoA thioesterase 1##BC127747|ACOT1|641371|acyl-CoA thioesterase 1##BC127748|ACOT1|641371|acyl-CoA thioesterase 1##BC143042|ACOT1|641371|acyl-CoA thioesterase 1##BC132889|ACOT1|641371|acyl-CoA thioesterase 1##BC132891|ACOT1|641371|acyl-CoA thioesterase 1##GU727640|ACOT1|641371|acyl-CoA thioesterase 1##AK093515|HEATR4|399671|HEAT repeat containing 4##BC047590|HEATR4|399671|HEAT repeat containing 4##NM_001220484|HEATR4|399671|HEAT repeat containing 4##NM_203309|HEATR4|399671|HEAT repeat containing 4##AK001939|ACOT2|10965|acyl-CoA thioesterase 2##DQ082755|ACOT2|10965|acyl-CoA thioesterase 2##AK223635|ACOT2|10965|acyl-CoA thioesterase 2##NM_006821|ACOT2|10965|acyl-CoA thioesterase 2##BC006335|ACOT2|10965|acyl-CoA thioesterase 2	0.957124	CTCF.p2:-30:0.957
chr11	104204854	104204965	reg1019285.p1	7.985	+	TSC_hg19_v1_chr11_-_104035100 BC030645	-169809	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	-169869	-	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	-170115	-	AF464191 AF464192 AF464193 AF464194 AF464195 AF486844 AF486845 AF486846 AF486847 NM_001191016	564487	-	NM_033306 U28977 U28978	622512	-	TSC_hg19_v1_chr11_-_104839279 U28979 BC008060 U28976 BC017839 U28014 AK225751 Z48810 U25804 AK296081 AK304222 NM_001225	634388	-	BC030645|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##AF464191|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464192|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464193|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464194|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464195|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486844|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486845|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486846|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486847|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_001191016|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_033306|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28977|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28978|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28979|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC008060|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28976|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC017839|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28014|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK225751|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##Z48810|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U25804|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK296081|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK304222|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##NM_001225|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	0.668052	CTCF.p2:-3:0.617
chr15	91477653	91477750	reg1016281.p1	7.985	+	TSC_hg19_v1_chr15_-_91475772 CU689746 NM_198527 BC033794 AK057584	-1965	-	AK125721 BC045635 NM_001039675	-4292	+	BC136448 BC144111 NM_006122	-30282	+	NM_018671	513	+	AK302979 TSC_hg19_v1_chr15_+_91478514 AK296964 AK291622	805	+	TSC_hg19_v1_chr15_+_91478521 AB014729 AB014736 BC006214	826	+	NM_198527|HDDC3|374659|HD domain containing 3##BC033794|HDDC3|374659|HD domain containing 3##AK057584|HDDC3|374659|HD domain containing 3##AK125721|UNC45A|55898|unc-45 homolog A (C. elegans)##BC045635|UNC45A|55898|unc-45 homolog A (C. elegans)##NM_001039675|UNC45A|55898|unc-45 homolog A (C. elegans)##BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##NM_018671|UNC45A|55898|unc-45 homolog A (C. elegans)##AK302979|UNC45A|55898|unc-45 homolog A (C. elegans)##AK296964|UNC45A|55898|unc-45 homolog A (C. elegans)##AK291622|UNC45A|55898|unc-45 homolog A (C. elegans)##AB014729|UNC45A|55898|unc-45 homolog A (C. elegans)##AB014736|UNC45A|55898|unc-45 homolog A (C. elegans)##BC006214|UNC45A|55898|unc-45 homolog A (C. elegans)	0.996986	CTCF.p2:-15:0.997
chr11	94871689	94871818	reg1019057.p1	7.984	+	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-48741	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-71345	+	TSC_hg19_v1_chr11_+_94800329 BC057783 BC006181	-71409	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	92551	-	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	650898	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	650980	-	AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8##BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B	0.0	
chr2	69792565	69792714	reg1020358.p1	7.984	+	BC113692 BC113694 AY335194 NM_001002755 NM_001002756 NM_001002757 NM_015700 TSC_hg19_v1_chr2_-_69664788	-127880	-	TSC_hg19_v1_chr2_-_69664606 AY286306 AY286307 BX538347	-128025	-	AJ132584 AF132967 AB528729 HQ258750 TSC_hg19_v1_chr2_-_69664568 AK300700 AK308567	-128066	-	TSC_hg19_v1_chr2_-_69870783 AK310951 AK056043	78129	-	TSC_hg19_v1_chr2_-_69870872 AB028971	78218	-	NM_014911 TSC_hg19_v1_chr2_-_69871063 BC090950	78453	-	BC113692|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BC113694|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY335194|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_001002755|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_001002756|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_001002757|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_015700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286306|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286307|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BX538347|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AJ132584|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AF132967|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##HQ258750|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK300700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK308567|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK310951|AAK1|22848|AP2 associated kinase 1##AK056043|AAK1|22848|AP2 associated kinase 1##AB028971|AAK1|22848|AP2 associated kinase 1##NM_014911|AAK1|22848|AP2 associated kinase 1##BC090950|AAK1|22848|AP2 associated kinase 1	1.215665	CTCF.p2:8:1.000	CTCF.p2:46:0.216
chr12	3143441	3143573	reg1020149.p1	7.983	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-74446	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-74913	+	TSC_hg19_v1_chr12_+_3000056 AK024246 NM_001160408 NM_003324 AK293285 AK307434 AF045583 BC032587 CU689434 AB464323 EU446713	-143454	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	43055	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	456934	+	AK125333 TSC_hg19_v1_chr12_-_3601984	458478	-	BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AK024246|TULP3|7289|tubby like protein 3##NM_001160408|TULP3|7289|tubby like protein 3##NM_003324|TULP3|7289|tubby like protein 3##AK293285|TULP3|7289|tubby like protein 3##AK307434|TULP3|7289|tubby like protein 3##AF045583|TULP3|7289|tubby like protein 3##BC032587|TULP3|7289|tubby like protein 3##EU446713|TULP3|7289|tubby like protein 3##NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223	0.959678	CTCF.p2:0:0.902
chr5	35599142	35599315	reg1016391.p1	7.983	+	NM_000949	-368406	-	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	-368651	-	NM_001204314 NM_001204315 NM_001204316 NM_001204317 NM_001204318	-481005	-	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	18781	+	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	257805	+	NM_001042625 BC017586 NM_144647	339580	-	NM_000949|PRLR|5618|prolactin receptor##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##NM_001204314|PRLR|5618|prolactin receptor##NM_001204315|PRLR|5618|prolactin receptor##NM_001204316|PRLR|5618|prolactin receptor##NM_001204317|PRLR|5618|prolactin receptor##NM_001204318|PRLR|5618|prolactin receptor##BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like	0.923423	CTCF.p2:-33:0.911
chr7	100781606	100781747	reg1014320.p1	7.983	+	NM_000602 NM_001165413 TSC_hg19_v1_chr7_+_100770384 AK293248 AK297728 AK298048 AK316225 BC020765 X04729 BC010860 X04429 X12701 BC005927 M16006	-11262	+	BC005847 TSC_hg19_v1_chr7_+_100728767 AK092927 AX747810 BC048194 NM_030961 BC011882	-52916	+	TSC_hg19_v1_chr7_+_100663360 AJ606307 AJ606308 NM_001040105	-118311	+	NM_001283 TSC_hg19_v1_chr7_+_100797756 AK312151 BC003561 AB015319	16052	+	BC063835 BC044212 TSC_hg19_v1_chr7_-_100808851 AK225839 NM_003378 BC036537	27176	-	BC037583 BC104841 AK096556 NM_198571	41849	-	NM_000602|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001165413|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK293248|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK297728|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK298048|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK316225|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC020765|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04729|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC010860|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04429|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X12701|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC005927|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##M16006|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC005847|TRIM56|81844|tripartite motif containing 56##BC048194|TRIM56|81844|tripartite motif containing 56##NM_030961|TRIM56|81844|tripartite motif containing 56##BC011882|TRIM56|81844|tripartite motif containing 56##AJ606307|MUC17|140453|mucin 17, cell surface associated##AJ606308|MUC17|140453|mucin 17, cell surface associated##NM_001040105|MUC17|140453|mucin 17, cell surface associated##NM_001283|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AK312151|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC003561|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AB015319|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC063835|VGF|7425|VGF nerve growth factor inducible##BC044212|VGF|7425|VGF nerve growth factor inducible##AK225839|VGF|7425|VGF nerve growth factor inducible##NM_003378|VGF|7425|VGF nerve growth factor inducible##BC036537|VGF|7425|VGF nerve growth factor inducible##BC037583|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##BC104841|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##AK096556|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##NM_198571|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)	0.999472	CTCF.p2:15:0.999
chr11	67382990	67383101	reg1017127.p1	7.982	+	BC007619 TSC_hg19_v1_chr11_+_67377037	-6064	+	NM_001166102 NM_007103 TSC_hg19_v1_chr11_+_67374428 AF092131 AF053070 BC008146 AK310537 AK223061 AK293522 AK300726 BC015645 AB590249 CR456739 CU677379 CU678877 DQ893236 DQ896566 AK316122	-8644	+	TSC_hg19_v1_chr11_+_67351285 AY887902 BC010915 BC044846 X15480 U62589 U30897	-31756	+	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	14358	-	BC113485 BC113487 AY229977 NM_005995	23982	-	AY032593 AY040761 AY169233 BC008689 NM_080658	35073	-	BC007619|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_001166102|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_007103|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF092131|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF053070|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC008146|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK310537|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK223061|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK293522|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK300726|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC015645|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##CR456739|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ893236|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ896566|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK316122|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC010915|GSTP1|2950|glutathione S-transferase pi 1##BC044846|GSTP1|2950|glutathione S-transferase pi 1##X15480|GSTP1|2950|glutathione S-transferase pi 1##U62589|GSTP1|2950|glutathione S-transferase pi 1##U30897|GSTP1|2950|glutathione S-transferase pi 1##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC113485|TBX10|347853|T-box 10##BC113487|TBX10|347853|T-box 10##AY229977|TBX10|347853|T-box 10##NM_005995|TBX10|347853|T-box 10##AY032593|ACY3|91703|aspartoacylase (aminocyclase) 3##AY040761|ACY3|91703|aspartoacylase (aminocyclase) 3##AY169233|ACY3|91703|aspartoacylase (aminocyclase) 3##BC008689|ACY3|91703|aspartoacylase (aminocyclase) 3##NM_080658|ACY3|91703|aspartoacylase (aminocyclase) 3	1.01292	CTCF.p2:5:0.999
chr13	91965470	91965593	reg1017020.p1	7.982	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3640662	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5592092	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7509031	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	85373	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1913896	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3166295	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.956738	CTCF.p2:-15:0.957
chr1	120413651	120413784	reg1017739.p1	7.981	+	NM_001047980	-25939	-	AY007243 AF345934 BC017089 TSC_hg19_v1_chr1_-_120354084 AF254415 AY126670 AY126671 AY126672 NM_001159352 NM_001159353 NM_032044	-59587	-	CR456850 BC044217 X83618 AK301594 AK313590 TSC_hg19_v1_chr1_-_120311529 AK302276 AK303777 NM_001166107 NM_005518	-102207	-	BC028372 AY358734 AK292483 NM_021794	25414	-	U77493 TSC_hg19_v1_chr1_-_120484245	70522	-	AF308601 TSC_hg19_v1_chr1_-_120612027 AF315356	198312	-	NM_001047980|NBPF7|343505|neuroblastoma breakpoint family, member 7##AY007243|REG4|83998|regenerating islet-derived family, member 4##AF345934|REG4|83998|regenerating islet-derived family, member 4##BC017089|REG4|83998|regenerating islet-derived family, member 4##AF254415|REG4|83998|regenerating islet-derived family, member 4##AY126670|REG4|83998|regenerating islet-derived family, member 4##AY126671|REG4|83998|regenerating islet-derived family, member 4##AY126672|REG4|83998|regenerating islet-derived family, member 4##NM_001159352|REG4|83998|regenerating islet-derived family, member 4##NM_001159353|REG4|83998|regenerating islet-derived family, member 4##NM_032044|REG4|83998|regenerating islet-derived family, member 4##CR456850|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##BC044217|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##X83618|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK301594|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK313590|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK302276|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK303777|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_001166107|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_005518|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##BC028372|ADAM30|11085|ADAM metallopeptidase domain 30##AY358734|ADAM30|11085|ADAM metallopeptidase domain 30##AK292483|ADAM30|11085|ADAM metallopeptidase domain 30##NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30##U77493|NOTCH2|4853|notch 2##AF308601|NOTCH2|4853|notch 2##AF315356|NOTCH2|4853|notch 2	0.543811	CTCF.p2:0:0.544
chr13	109549449	109549558	reg1017914.p1	7.981	+	AB290159 AK127806 NM_001198950	-267934	+	AB020672 BC146791 NM_015011 AL834447	-300989	+	DQ857728 TSC_hg19_v1_chr13_+_108955871	-593686	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	889405	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	1253232	-	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	1410006	-	AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1	0.0	
chr1	110805581	110805718	reg1020094.p1	7.980	+	AK310193 M64676 TSC_hg19_v1_chr1_+_110754079 BC101769	-51652	+	TSC_hg19_v1_chr1_+_110753347 NM_001039574 NM_004978	-52305	+	NM_001010898 AK289982 TSC_hg19_v1_chr1_+_110693135	-112515	+	AF368062 AF368063 AF368064 NM_001201545 NM_022768 BC098140 BC103493 BC103507 BC103660 TSC_hg19_v1_chr1_+_110882045	76345	+	BC047479 TSC_hg19_v1_chr1_+_110882057	76408	+	TSC_hg19_v1_chr1_+_110882092 AK022541 BC006397 BC062316	76432	+	AK310193|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##M64676|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##BC101769|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_001039574|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_004978|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_001010898|SLC6A17|388662|solute carrier family 6, member 17##AK289982|SLC6A17|388662|solute carrier family 6, member 17##AF368062|RBM15|64783|RNA binding motif protein 15##AF368063|RBM15|64783|RNA binding motif protein 15##AF368064|RBM15|64783|RNA binding motif protein 15##NM_001201545|RBM15|64783|RNA binding motif protein 15##NM_022768|RBM15|64783|RNA binding motif protein 15##BC098140|RBM15|64783|RNA binding motif protein 15##BC103493|RBM15|64783|RNA binding motif protein 15##BC103507|RBM15|64783|RNA binding motif protein 15##BC103660|RBM15|64783|RNA binding motif protein 15##BC047479|RBM15|64783|RNA binding motif protein 15##AK022541|RBM15|64783|RNA binding motif protein 15##BC006397|RBM15|64783|RNA binding motif protein 15##BC062316|RBM15|64783|RNA binding motif protein 15	0.025548	
chr2	236688206	236688322	reg1018317.p1	7.979	+	TSC_hg19_v1_chr2_+_236403297 AB384114 AF413078	-284954	+	TSC_hg19_v1_chr2_+_236402950 BC140856	-285287	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	-285461	+	AK311262 TSC_hg19_v1_chr2_-_237076045	387750	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	388368	-	NM_212556 BX647589	484730	-	AF413078|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18	0.999537	CTCF.p2:-14:1.000
chr6	12638402	12638533	reg1016306.p2	7.979	+	TSC_hg19_v1_chr6_+_12514301 D28417	-124165	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	-347874	+	NM_002114	-625744	+	AK295263 TSC_hg19_v1_chr6_+_12716998	78476	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	78576	+	AK091836 AX747210 NM_001242698	657350	-	NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357	0.729279	CTCF.p2:-9:0.729
chr12	107498627	107498744	reg1016074.p1	7.978	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-11075	-	BC030519 TSC_hg19_v1_chr12_-_107487328 D83702	-11352	-	TSC_hg19_v1_chr12_-_107380925 BC036066 BC068468 AK222558 AY008301 BC050361 BC025984 AK024124 NM_001033050 NM_025198	-117787	-	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	213528	+	AK127295 NM_001017523	475948	+	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	580982	+	NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##BC030519|CRY1|1407|cryptochrome 1 (photolyase-like)##D83702|CRY1|1407|cryptochrome 1 (photolyase-like)##BC036066|MTERFD3|80298|MTERF domain containing 3##BC068468|MTERFD3|80298|MTERF domain containing 3##AK222558|MTERFD3|80298|MTERF domain containing 3##AY008301|MTERFD3|80298|MTERF domain containing 3##BC050361|MTERFD3|80298|MTERF domain containing 3##BC025984|MTERFD3|80298|MTERF domain containing 3##AK024124|MTERFD3|80298|MTERF domain containing 3##NM_001033050|MTERFD3|80298|MTERF domain containing 3##NM_025198|MTERFD3|80298|MTERF domain containing 3##BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)	0.975154	CTCF.p2:1:0.975
chr1	28736350	28736493	reg1017923.p1	7.978	+	TSC_hg19_v1_chr1_+_28696251 NM_001048183 CR749449 AK025436 BC029266 BC016152 BC068508	-40196	+	NM_001127350 NM_017638 AK296130 AK000052 AB107222 BC002694 TSC_hg19_v1_chr1_+_28655576	-80874	+	TSC_hg19_v1_chr1_+_28586034 NM_031459 BC013304 AY123223 BC033719 AL136551 AK315710 DQ892827 DQ896073 EU831582 EU831667 AB529110 CU680558	-150263	+	NM_023923 BC021247	28249	+	NM_001048199 TSC_hg19_v1_chr1_+_28832500	96077	+	TSC_hg19_v1_chr1_+_28832555 AJ006834 AJ006835 X06130 BC012122 BC065008 BC007300 BC036903 BC006790 BC017334	96161	+	NM_001048183|PHACTR4|65979|phosphatase and actin regulator 4##CR749449|PHACTR4|65979|phosphatase and actin regulator 4##AK025436|PHACTR4|65979|phosphatase and actin regulator 4##BC029266|PHACTR4|65979|phosphatase and actin regulator 4##BC016152|PHACTR4|65979|phosphatase and actin regulator 4##BC068508|PHACTR4|65979|phosphatase and actin regulator 4##NM_001127350|MED18|54797|mediator complex subunit 18##NM_017638|MED18|54797|mediator complex subunit 18##AK296130|MED18|54797|mediator complex subunit 18##AK000052|MED18|54797|mediator complex subunit 18##AB107222|MED18|54797|mediator complex subunit 18##BC002694|MED18|54797|mediator complex subunit 18##NM_031459|SESN2|83667|sestrin 2##BC013304|SESN2|83667|sestrin 2##AY123223|SESN2|83667|sestrin 2##BC033719|SESN2|83667|sestrin 2##AL136551|SESN2|83667|sestrin 2##AK315710|SESN2|83667|sestrin 2##DQ892827|SESN2|83667|sestrin 2##DQ896073|SESN2|83667|sestrin 2##EU831582|SESN2|83667|sestrin 2##EU831667|SESN2|83667|sestrin 2##NM_023923|PHACTR4|65979|phosphatase and actin regulator 4##BC021247|PHACTR4|65979|phosphatase and actin regulator 4##NM_001048199|RCC1|1104|regulator of chromosome condensation 1##AJ006834|SNHG3|8420|small nucleolar RNA host gene 3 (non-protein coding)##AJ006835|SNHG3|8420|small nucleolar RNA host gene 3 (non-protein coding)##BC012122|SNHG3|8420|small nucleolar RNA host gene 3 (non-protein coding)##BC065008|SNHG3|8420|small nucleolar RNA host gene 3 (non-protein coding)##BC006790|SNHG3|8420|small nucleolar RNA host gene 3 (non-protein coding)##BC017334|SNHG3|8420|small nucleolar RNA host gene 3 (non-protein coding)	0.989983	CTCF.p2:15:0.990
chr16	2537307	2537427	reg1015821.p2	7.978	+	TSC_hg19_v1_chr16_+_2525149 BC112389 NM_001199107 NM_020705 AB032997	-12236	+	NM_006181 U86759	-15868	+	AK128408 TSC_hg19_v1_chr16_+_2510099 NM_025108 AK093788 AK301929 AX748307 BC018719 AK023971	-27255	+	TSC_hg19_v1_chr16_+_2563709 NM_001198569 M62762 NM_001694	26417	+	TSC_hg19_v1_chr16_+_2563952 BC009290	26578	+	TSC_hg19_v1_chr16_+_2563977 BC007389 BC004537	26614	+	BC112389|TBC1D24|57465|TBC1 domain family, member 24##NM_001199107|TBC1D24|57465|TBC1 domain family, member 24##NM_020705|TBC1D24|57465|TBC1 domain family, member 24##AB032997|TBC1D24|57465|TBC1 domain family, member 24##NM_006181|NTN3|4917|netrin 3##U86759|NTN3|4917|netrin 3##AK128408|C16orf59|80178|chromosome 16 open reading frame 59##NM_025108|C16orf59|80178|chromosome 16 open reading frame 59##AK093788|C16orf59|80178|chromosome 16 open reading frame 59##AK301929|C16orf59|80178|chromosome 16 open reading frame 59##BC018719|C16orf59|80178|chromosome 16 open reading frame 59##AK023971|C16orf59|80178|chromosome 16 open reading frame 59##NM_001198569|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##M62762|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##NM_001694|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##BC009290|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##BC007389|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##BC004537|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	0.0	
chr2	81551297	81551419	reg1019049.p1	7.978	+	TSC_hg19_v1_chr2_-_80531838 AK225779	-1019515	-	TSC_hg19_v1_chr2_-_80531719 AK290512	-1019633	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	-1019833	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	3135012	-	AK296741 TSC_hg19_v1_chr2_-_84686396	3135037	-	NM_003849	3135227	-	AK225779|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit	0.948556	CTCF.p2:-14:0.949
chr13	62894389	62894508	reg1017377.p1	7.977	+	AK289924 NM_022843	-904794	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-905195	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-1922969	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	4910056	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	7788093	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	9545811	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.869852	CTCF.p2:1:0.870
chr3	143694553	143694688	reg1017726.p1	7.977	+	NM_001134470 AK294020	-2403	+	TSC_hg19_v1_chr3_+_143690915 BC037293	-3630	+	NM_173552 AK315082	-3968	+	AB527423 U84573 AK295084 TSC_hg19_v1_chr3_-_145878818	2184187	-	TSC_hg19_v1_chr3_-_145878972 BC037169 AB209879	2184336	-	TSC_hg19_v1_chr3_-_145879223 NM_000935 NM_182943	2184631	-	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58##AK294020|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##U84573|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AK295084|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##BC037169|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AB209879|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_000935|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_182943|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2	0.765141	CTCF.p2:-20:0.765
chr17	34303140	34303259	reg1015341.p1	7.976	+	BC054481 NM_001199951	-32513	-	CU691088 AY742214 AY359018 NM_020426	-36740	-	AB528914 EF488474 EF488475 EF488476 EF488477 EF488478 BC032114 AK302782 AB080728 TSC_hg19_v1_chr17_-_34257778 BC127190 BC038301 NM_001034836 NM_001163120 NM_001163121 NM_145654	-45441	-	AB527929 U91746 AF055467 BC096352 BC099662 BC099663 BC099664 AF039955 NM_004590 AB007454 AK309593	5294	-	AB527896 HQ257907 BC038289 BC050647 Z49270 BC045165 NM_032962 NM_032963 TSC_hg19_v1_chr17_-_34313766 AX772826	10540	-	AB463484 AF031587 Z70292 Z70293 TSC_hg19_v1_chr17_-_34328592 U58914	25362	-	BC054481|LYZL6|57151|lysozyme-like 6##NM_001199951|LYZL6|57151|lysozyme-like 6##AY742214|LYZL6|57151|lysozyme-like 6##AY359018|LYZL6|57151|lysozyme-like 6##NM_020426|LYZL6|57151|lysozyme-like 6##EF488474|RDM1|201299|RAD52 motif 1##EF488475|RDM1|201299|RAD52 motif 1##EF488476|RDM1|201299|RAD52 motif 1##EF488477|RDM1|201299|RAD52 motif 1##EF488478|RDM1|201299|RAD52 motif 1##BC032114|RDM1|201299|RAD52 motif 1##AK302782|RDM1|201299|RAD52 motif 1##AB080728|RDM1|201299|RAD52 motif 1##BC127190|RDM1|201299|RAD52 motif 1##BC038301|RDM1|201299|RAD52 motif 1##NM_001034836|RDM1|201299|RAD52 motif 1##NM_001163120|RDM1|201299|RAD52 motif 1##NM_001163121|RDM1|201299|RAD52 motif 1##NM_145654|RDM1|201299|RAD52 motif 1##U91746|CCL16|6360|chemokine (C-C motif) ligand 16##AF055467|CCL16|6360|chemokine (C-C motif) ligand 16##BC096352|CCL16|6360|chemokine (C-C motif) ligand 16##BC099662|CCL16|6360|chemokine (C-C motif) ligand 16##BC099663|CCL16|6360|chemokine (C-C motif) ligand 16##BC099664|CCL16|6360|chemokine (C-C motif) ligand 16##AF039955|CCL16|6360|chemokine (C-C motif) ligand 16##NM_004590|CCL16|6360|chemokine (C-C motif) ligand 16##AB007454|CCL16|6360|chemokine (C-C motif) ligand 16##HQ257907|CCL14|6358|chemokine (C-C motif) ligand 14##BC038289|CCL14|6358|chemokine (C-C motif) ligand 14##BC050647|CCL14|6358|chemokine (C-C motif) ligand 14##Z49270|CCL14|6358|chemokine (C-C motif) ligand 14##BC045165|CCL14|6358|chemokine (C-C motif) ligand 14##NM_032962|CCL14|6358|chemokine (C-C motif) ligand 14##NM_032963|CCL14|6358|chemokine (C-C motif) ligand 14##AF031587|CCL15|6359|chemokine (C-C motif) ligand 15##Z70292|CCL14-CCL15|348249|CCL14-CCL15 readthrough##Z70293|CCL14-CCL15|348249|CCL14-CCL15 readthrough##U58914|CCL15|6359|chemokine (C-C motif) ligand 15	0.941764	CTCF.p2:-21:0.942
chr22	30021706	30021836	reg1017630.p2	7.976	+	BC020257 TSC_hg19_v1_chr22_+_29999653 BC003112 L11353 Z22664 CR456530 AF122827 AF122828 AF123570 AB587384 CU013130 CU013418 DQ891697 DQ894878 AF369661 AF369662 AF369663 AF369664 AF369665 AF369666 AF369667 AF369668 EF517524 S73853	-21907	+	TSC_hg19_v1_chr22_+_29999621 AF369701	-22157	+	AK297116 TSC_hg19_v1_chr22_+_29999605	-22166	+	TSC_hg19_v1_chr22_+_30116288 BC051805 NM_182527 HQ257899	94579	+	BC009717 TSC_hg19_v1_chr22_-_30162985 AK292671 NM_001003692 NM_019103	141189	-	TSC_hg19_v1_chr22_-_30162997 AK123261	141224	-	BC020257|NF2|4771|neurofibromin 2 (merlin)##BC003112|NF2|4771|neurofibromin 2 (merlin)##L11353|NF2|4771|neurofibromin 2 (merlin)##Z22664|NF2|4771|neurofibromin 2 (merlin)##CR456530|NF2|4771|neurofibromin 2 (merlin)##AF122827|NF2|4771|neurofibromin 2 (merlin)##AF122828|NF2|4771|neurofibromin 2 (merlin)##AF123570|NF2|4771|neurofibromin 2 (merlin)##CU013130|NF2|4771|neurofibromin 2 (merlin)##CU013418|NF2|4771|neurofibromin 2 (merlin)##DQ891697|NF2|4771|neurofibromin 2 (merlin)##DQ894878|NF2|4771|neurofibromin 2 (merlin)##AF369661|NF2|4771|neurofibromin 2 (merlin)##AF369662|NF2|4771|neurofibromin 2 (merlin)##AF369663|NF2|4771|neurofibromin 2 (merlin)##AF369664|NF2|4771|neurofibromin 2 (merlin)##AF369665|NF2|4771|neurofibromin 2 (merlin)##AF369666|NF2|4771|neurofibromin 2 (merlin)##AF369667|NF2|4771|neurofibromin 2 (merlin)##AF369668|NF2|4771|neurofibromin 2 (merlin)##EF517524|NF2|4771|neurofibromin 2 (merlin)##S73853|NF2|4771|neurofibromin 2 (merlin)##AF369701|NF2|4771|neurofibromin 2 (merlin)##AK297116|NF2|4771|neurofibromin 2 (merlin)##BC051805|CABP7|164633|calcium binding protein 7##NM_182527|CABP7|164633|calcium binding protein 7##HQ257899|CABP7|164633|calcium binding protein 7##BC009717|ZMAT5|55954|zinc finger, matrin-type 5##AK292671|ZMAT5|55954|zinc finger, matrin-type 5##NM_001003692|ZMAT5|55954|zinc finger, matrin-type 5##NM_019103|ZMAT5|55954|zinc finger, matrin-type 5	0.972796	CTCF.p2:-17:0.973
chr7	82234680	82234818	reg1016576.p1	7.976	+	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	-161669	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	-161903	-	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-835375	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	557120	-	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	557487	-	AK303925 NM_001178129	1035997	-	NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	0.018551	
chr5	90228062	90228193	reg1019269.p1	7.975	+	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	-373513	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-402761	-	NM_006467 AK295434 U93868	-457425	+	AK091866 TSC_hg19_v1_chr5_-_90610220	382118	-	TSC_hg19_v1_chr5_+_90676181 BC043415	448035	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	451005	-	AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3	0.943887	CTCF.p2:-11:0.944
chr1	231892656	231892770	reg1016398.p1	7.974	+	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	-130158	+	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	-228282	+	AF229245 NM_022051	-331924	-	BC006013 NM_020808 AY168879	758556	-	TSC_hg19_v1_chr1_-_232878472 AK093200	985744	-	NM_019090 BC109122	1047991	+	AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1##FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)##NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)##BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_019090|KIAA1383|54627|KIAA1383##BC109122|KIAA1383|54627|KIAA1383	0.893361	CTCF.p2:8:0.893
chr19	50220843	50221011	reg1018042.p1	7.974	+	TSC_hg19_v1_chr19_+_50194833 AK299866	-26093	+	TSC_hg19_v1_chr19_+_50194384 NM_001136052 NM_001199752 NM_001199753 NM_152359 AK096516 AK289713 AK309087 AK290092 BC029104 AF357970	-26541	+	AL359598 TSC_hg19_v1_chr19_+_50192561	-28427	+	NM_021733 BC058862	45601	-	TSC_hg19_v1_chr19_+_50270224 NM_014203 NM_130787 AK302005	49224	+	AK124343 TSC_hg19_v1_chr19_+_50270264	49336	+	AK299866|CPT1C|126129|carnitine palmitoyltransferase 1C##NM_001136052|CPT1C|126129|carnitine palmitoyltransferase 1C##NM_001199752|CPT1C|126129|carnitine palmitoyltransferase 1C##NM_001199753|CPT1C|126129|carnitine palmitoyltransferase 1C##NM_152359|CPT1C|126129|carnitine palmitoyltransferase 1C##AK096516|CPT1C|126129|carnitine palmitoyltransferase 1C##AK289713|CPT1C|126129|carnitine palmitoyltransferase 1C##AK309087|CPT1C|126129|carnitine palmitoyltransferase 1C##AK290092|CPT1C|126129|carnitine palmitoyltransferase 1C##BC029104|CPT1C|126129|carnitine palmitoyltransferase 1C##AF357970|CPT1C|126129|carnitine palmitoyltransferase 1C##AL359598|C19orf76|199800|chromosome 19 open reading frame 76##NM_021733|TSKS|60385|testis-specific serine kinase substrate##BC058862|TSKS|60385|testis-specific serine kinase substrate##NM_014203|AP2A1|160|adaptor-related protein complex 2, alpha 1 subunit##NM_130787|AP2A1|160|adaptor-related protein complex 2, alpha 1 subunit##AK302005|AP2A1|160|adaptor-related protein complex 2, alpha 1 subunit##AK124343|AP2A1|160|adaptor-related protein complex 2, alpha 1 subunit	0.829547	CTCF.p2:-23:0.830
chr2	1821399	1821522	reg1019408.p1	7.974	+	TSC_hg19_v1_chr2_-_1748320 BC030834	-73138	-	TSC_hg19_v1_chr2_-_1748288 NM_012293	-73167	-	TSC_hg19_v1_chr2_-_1748282 AF200348 D86983 EF090903	-73199	-	AL133024 TSC_hg19_v1_chr2_-_1926602	105091	-	BC031690 TSC_hg19_v1_chr2_-_1946938	125446	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	513505	-	BC030834|PXDN|7837|peroxidasin homolog (Drosophila)##NM_012293|PXDN|7837|peroxidasin homolog (Drosophila)##AF200348|PXDN|7837|peroxidasin homolog (Drosophila)##D86983|PXDN|7837|peroxidasin homolog (Drosophila)##EF090903|PXDN|7837|peroxidasin homolog (Drosophila)##AL133024|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like	0.985002	CTCF.p2:7:0.985
chr17	81035006	81035073	reg1024004.p1	7.973	+	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	-25370	-	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	-28569	-	BC109036 BC109037 AK301690 AK023903 NM_024702	-237130	-	TSC_hg19_v1_chr17_+_81037508 BC082252 NM_001004431 BC118558 BC118638	2503	+	None	None	None	None	None	None	AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC109036|ZNF750|79755|zinc finger protein 750##BC109037|ZNF750|79755|zinc finger protein 750##AK301690|ZNF750|79755|zinc finger protein 750##AK023903|ZNF750|79755|zinc finger protein 750##NM_024702|ZNF750|79755|zinc finger protein 750##BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like##NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like	0.016792	
chr6	524952	525059	reg1018238.p1	7.973	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-133241	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-232508	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-232920	+	AF508547 BC101697 BC101699 NM_148959	131948	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	168085	-	BC053850 NM_033260	787669	+	NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1	0.08498	
chr12	50135035	50135139	reg1014375.p1	7.972	+	TSC_hg19_v1_chr12_-_50101206 AB095934 BC159100 NM_175736 NM_198900	-33875	-	TSC_hg19_v1_chr12_-_50101189 AK128195	-33929	-	AB384661 TSC_hg19_v1_chr12_-_50101046	-34077	-	NM_003217 TSC_hg19_v1_chr12_+_50135339 AK130050 AK225804 AK299587 AK304577	231	+	TSC_hg19_v1_chr12_+_50135353 AK312238 BC000916 AF033095	271	+	NM_001098576 AK124849	505	+	AB095934|FMNL3|91010|formin-like 3##BC159100|FMNL3|91010|formin-like 3##NM_175736|FMNL3|91010|formin-like 3##NM_198900|FMNL3|91010|formin-like 3##AK128195|FMNL3|91010|formin-like 3##NM_003217|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK130050|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK225804|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK299587|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK304577|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK312238|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##BC000916|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AF033095|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##NM_001098576|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK124849|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6	0.073422	
chr3	54462457	54462571	reg1017083.p2	7.972	+	TSC_hg19_v1_chr3_+_54156691 AF516696 NM_018398	-305823	+	BC137502 BC137505 TSC_hg19_v1_chr3_+_54156614	-305915	+	TSC_hg19_v1_chr3_-_53925897 AF537132 AK289594 BC013162 AK123406 AF085359 AF161415 NM_021237	-536585	-	BC074741 AF225421 NM_020678	499502	-	TSC_hg19_v1_chr3_-_55514935 CU687936 AB590996 BC074783	1052430	-	TSC_hg19_v1_chr3_-_55515377 L20861	1052861	-	AF516696|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##NM_018398|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137502|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137505|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##AF537132|SELK|58515|selenoprotein K##AK289594|SELK|58515|selenoprotein K##BC013162|SELK|58515|selenoprotein K##AK123406|SELK|58515|selenoprotein K##AF085359|SELK|58515|selenoprotein K##AF161415|SELK|58515|selenoprotein K##NM_021237|SELK|58515|selenoprotein K##BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A##L20861|WNT5A|7474|wingless-type MMTV integration site family, member 5A	0.836893	CTCF.p2:-17:0.837
chr8	28348281	28348400	reg1015950.p2	7.972	+	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	-561	-	AK002050 AK023418 NM_018660 AB057659 AB073627	-104379	-	BC001237 TSC_hg19_v1_chr8_-_28243694	-104698	-	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	3425	+	TSC_hg19_v1_chr8_+_28559032 AB011091	210735	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	210810	+	BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##BC001237|ZNF395|55893|zinc finger protein 395##NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##AB011091|EXTL3|2137|exostoses (multiple)-like 3##AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3	0.716391	CTCF.p2:17:0.716
chr9	114849114	114849210	reg1015318.p2	7.971	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-189695	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-190048	+	AL833535 NM_173521	-303387	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	88358	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	246125	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	246687	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.930748	CTCF.p2:3:0.931
chrX	102598189	102598303	reg1017340.p2	7.970	+	NM_152278 AK094400 BC016786 BC005988	-13106	+	AF251053 BC015522 TSC_hg19_v1_chrX_-_102565919 NM_001168399 NM_001168400 AK312085 BC050651 AY833560 NM_001168401 NM_032621	-32357	-	BC132922 BC132924 NM_001012979	-66512	-	NM_001006612 NM_001006613 NM_001006614 NM_016303 TSC_hg19_v1_chrX_+_102611431 AF125535 BC023544 AK312190 AL833152	13174	+	NM_206915 NM_206917 TSC_hg19_v1_chrX_+_102631313	33054	+	TSC_hg19_v1_chrX_+_102631465 AK315371 AK057859 BC051713 AY833562 BC003190	33217	+	NM_152278|TCEAL7|56849|transcription elongation factor A (SII)-like 7##AK094400|TCEAL7|56849|transcription elongation factor A (SII)-like 7##BC016786|TCEAL7|56849|transcription elongation factor A (SII)-like 7##BC005988|TCEAL7|56849|transcription elongation factor A (SII)-like 7##AF251053|BEX2|84707|brain expressed X-linked 2##BC015522|BEX2|84707|brain expressed X-linked 2##NM_001168399|BEX2|84707|brain expressed X-linked 2##NM_001168400|BEX2|84707|brain expressed X-linked 2##AK312085|BEX2|84707|brain expressed X-linked 2##BC050651|BEX2|84707|brain expressed X-linked 2##AY833560|BEX2|84707|brain expressed X-linked 2##NM_001168401|BEX2|84707|brain expressed X-linked 2##NM_032621|BEX2|84707|brain expressed X-linked 2##BC132922|TCEAL5|340543|transcription elongation factor A (SII)-like 5##BC132924|TCEAL5|340543|transcription elongation factor A (SII)-like 5##NM_001012979|TCEAL5|340543|transcription elongation factor A (SII)-like 5##NM_001006612|WBP5|51186|WW domain binding protein 5##NM_001006613|WBP5|51186|WW domain binding protein 5##NM_001006614|WBP5|51186|WW domain binding protein 5##NM_016303|WBP5|51186|WW domain binding protein 5##AF125535|WBP5|51186|WW domain binding protein 5##BC023544|WBP5|51186|WW domain binding protein 5##AK312190|WBP5|51186|WW domain binding protein 5##AL833152|WBP5|51186|WW domain binding protein 5##NM_206915|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##NM_206917|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AK315371|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AK057859|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##BC051713|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AY833562|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##BC003190|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1	0.038195	
chr13	87219537	87219639	reg1017933.p1	7.969	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-846149	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-2763088	-	TSC_hg19_v1_chr13_-_84456424 BC051738	-2763163	-	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	1105281	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	4831316	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	6659839	+	BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6	0.801885	CTCF.p2:1:0.802
chr18	74767050	74767189	reg1016160.p2	7.969	+	TSC_hg19_v1_chr18_-_74729052 AK314553 NM_001025081 NM_001025090 NM_001025092 NM_002385 AK293922	-38052	-	CR536534 CR541919 TSC_hg19_v1_chr18_-_74729012 AK296492 M30515 M30516 BC008749 BC101771 BC101773 BC143348 BC143350 M30047 BC080654 M13577 AK289893 AK098402 AK128788 CR627018 AK128770 BC068550	-38124	-	AK074315 TSC_hg19_v1_chr18_-_74728814	-38363	-	TSC_hg19_v1_chr18_-_74844720 BC065248 AB208986 L18865	77598	-	TSC_hg19_v1_chr18_-_74844774 NM_001025100 NM_001025101	77660	-	TSC_hg19_v1_chr18_+_74961925 NM_001480	194847	+	AK314553|MBP|4155|myelin basic protein##NM_001025081|MBP|4155|myelin basic protein##NM_001025090|MBP|4155|myelin basic protein##NM_001025092|MBP|4155|myelin basic protein##NM_002385|MBP|4155|myelin basic protein##AK293922|MBP|4155|myelin basic protein##CR536534|MBP|4155|myelin basic protein##CR541919|MBP|4155|myelin basic protein##M30515|MBP|4155|myelin basic protein##M30516|MBP|4155|myelin basic protein##BC008749|MBP|4155|myelin basic protein##BC101771|MBP|4155|myelin basic protein##BC101773|MBP|4155|myelin basic protein##BC143348|MBP|4155|myelin basic protein##BC143350|MBP|4155|myelin basic protein##M30047|MBP|4155|myelin basic protein##BC080654|MBP|4155|myelin basic protein##M13577|MBP|4155|myelin basic protein##AK289893|MBP|4155|myelin basic protein##AK098402|MBP|4155|myelin basic protein##AK128788|MBP|4155|myelin basic protein##CR627018|MBP|4155|myelin basic protein##AK128770|MBP|4155|myelin basic protein##BC068550|MBP|4155|myelin basic protein##AK074315|MBP|4155|myelin basic protein##BC065248|MBP|4155|myelin basic protein##AB208986|MBP|4155|myelin basic protein##L18865|MBP|4155|myelin basic protein##NM_001025100|MBP|4155|myelin basic protein##NM_001025101|MBP|4155|myelin basic protein##NM_001480|GALR1|2587|galanin receptor 1	0.023172	
chr5	129477525	129477660	reg1014968.p2	7.969	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	-237105	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-681539	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-1047167	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	1023339	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	1023398	-	TSC_hg19_v1_chr5_-_130501019 NM_005340	1023451	-	BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1##NM_005340|HINT1|3094|histidine triad nucleotide binding protein 1	0.923723	CTCF.p2:9:0.924
chr11	107870592	107870724	reg1018164.p1	7.968	+	TSC_hg19_v1_chr11_+_107799171 AK292969 BC028064 NM_017516 X99962	-71423	+	NM_017515	-140745	-	AK300582 TSC_hg19_v1_chr11_-_107729530 BC039195	-141070	-	NM_003478 AK125294	8774	+	TSC_hg19_v1_chr11_+_107879644 AK292575 BC063306	8969	+	X81882 BC017838 TSC_hg19_v1_chr11_+_107880062 CU687672 AF017061 AF327710	9371	+	AK292969|RAB39A|54734|RAB39A, member RAS oncogene family##BC028064|RAB39A|54734|RAB39A, member RAS oncogene family##NM_017516|RAB39A|54734|RAB39A, member RAS oncogene family##X99962|RAB39A|54734|RAB39A, member RAS oncogene family##NM_017515|SLC35F2|54733|solute carrier family 35, member F2##AK300582|SLC35F2|54733|solute carrier family 35, member F2##BC039195|SLC35F2|54733|solute carrier family 35, member F2##NM_003478|CUL5|8065|cullin 5##AK125294|CUL5|8065|cullin 5##AK292575|CUL5|8065|cullin 5##BC063306|CUL5|8065|cullin 5##X81882|CUL5|8065|cullin 5##BC017838|CUL5|8065|cullin 5##AF017061|CUL5|8065|cullin 5##AF327710|CUL5|8065|cullin 5	0.0	
chr2	33638134	33638251	reg1017005.p1	7.968	+	TSC_hg19_v1_chr2_+_33359657 NM_000627 NM_001166264 NM_001166265 NM_001166266 AB208801 BC130289 BC144127 BC144128 M34057 AB384737 AF489528	-278487	+	NM_206943	-465824	+	NM_001193509 NM_017735 AK299196 BC063791 TSC_hg19_v1_chr2_+_32853177 AK027570	-785058	+	AK125551 TSC_hg19_v1_chr2_+_33661417 BC027849 NM_170672 AK292983	23256	+	NM_001139488	63128	+	TSC_hg19_v1_chr2_+_33701715 BX647990	63504	+	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1##AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1##M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1##AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_206943|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001193509|TTC27|55622|tetratricopeptide repeat domain 27##NM_017735|TTC27|55622|tetratricopeptide repeat domain 27##AK299196|TTC27|55622|tetratricopeptide repeat domain 27##BC063791|TTC27|55622|tetratricopeptide repeat domain 27##AK027570|TTC27|55622|tetratricopeptide repeat domain 27##AK125551|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC027849|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_170672|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK292983|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_001139488|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)	0.971136	CTCF.p2:-1:0.971
chr11	85652	85762	reg1016451.p1	7.967	+	None	None	None	None	None	None	None	None	None	AY026938 BC069287 NM_001097610 NM_145651 BC111427 BC111433 AB590098 AM392647 AM393773 AM393805	107381	+	NM_053280 AY713299 AL133658	111070	+	EU832497 EU832578 TSC_hg19_v1_chr11_-_207355	121644	-	AY026938|SCGB1C1|147199|secretoglobin, family 1C, member 1##BC069287|SCGB1C1|147199|secretoglobin, family 1C, member 1##NM_001097610|LOC653486|653486|secretoglobin, family 1C, member 1-like##NM_145651|SCGB1C1|147199|secretoglobin, family 1C, member 1##BC111427|SCGB1C1|147199|secretoglobin, family 1C, member 1##BC111433|SCGB1C1|147199|secretoglobin, family 1C, member 1##AM392647|SCGB1C1|147199|secretoglobin, family 1C, member 1##AM393773|SCGB1C1|147199|secretoglobin, family 1C, member 1##AM393805|SCGB1C1|147199|secretoglobin, family 1C, member 1##NM_053280|ODF3|113746|outer dense fiber of sperm tails 3##AY713299|ODF3|113746|outer dense fiber of sperm tails 3##AL133658|ODF3|113746|outer dense fiber of sperm tails 3##EU832497|BET1L|51272|blocked early in transport 1 homolog (S. cerevisiae)-like##EU832578|BET1L|51272|blocked early in transport 1 homolog (S. cerevisiae)-like	0.996754	CTCF.p2:0:0.997
chr12	65090181	65090362	reg1016818.p1	7.967	+	TSC_hg19_v1_chr12_+_65004274 AY217662 AY217663 BC100949 BC100950 BC100951 BC100952 NM_178169	-86010	+	NM_013254 TSC_hg19_v1_chr12_+_64845917 AK291039 BC034950 AF191838	-244378	+	BC020569 Y16414 TSC_hg19_v1_chr12_+_64803772 AF039022	-286493	+	CU680338 Z12173 TSC_hg19_v1_chr12_-_65153140	62826	-	TSC_hg19_v1_chr12_-_65153163 AK308454 AK291771	62888	-	AK223484 AK302443 TSC_hg19_v1_chr12_-_65153187 AK296759 AK300350 AK304158 AK308094 BC012482	62913	-	AY217662|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##AY217663|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100949|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100950|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100951|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100952|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##NM_178169|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##NM_013254|TBK1|29110|TANK-binding kinase 1##AK291039|TBK1|29110|TANK-binding kinase 1##BC034950|TBK1|29110|TANK-binding kinase 1##AF191838|TBK1|29110|TANK-binding kinase 1##BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Z12173|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK308454|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK291771|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK223484|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK302443|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK296759|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK300350|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK304158|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK308094|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##BC012482|GNS|2799|glucosamine (N-acetyl)-6-sulfatase	0.023964	
chr3	132450080	132450189	reg1017354.p1	7.967	+	AB082531 NM_153240 TSC_hg19_v1_chr3_-_132441315	-8826	-	TSC_hg19_v1_chr3_-_132441226 AY257864 BC131729 BC068082 AK055893	-8889	-	TSC_hg19_v1_chr3_+_132441069 BC039375 BC048124	-9007	+	NM_001136469 NM_023943 TSC_hg19_v1_chr3_+_132757202	307053	+	TSC_hg19_v1_chr3_+_132757234 AY358381 BC000568	307100	+	NM_003571 BC113518 BC113520 HQ258421 U48224	668724	+	AB082531|NPHP3-ACAD11|100532724|NPHP3-ACAD11 readthrough##NM_153240|NPHP3|27031|nephronophthisis 3 (adolescent)##AY257864|NPHP3|27031|nephronophthisis 3 (adolescent)##BC131729|NPHP3|27031|nephronophthisis 3 (adolescent)##BC068082|NPHP3|27031|nephronophthisis 3 (adolescent)##AK055893|NPHP3|27031|nephronophthisis 3 (adolescent)##BC039375|NPHP3-AS1|348808|NPHP3 antisense RNA 1 (non-protein coding)##BC048124|NPHP3-AS1|348808|NPHP3 antisense RNA 1 (non-protein coding)##NM_001136469|TMEM108|66000|transmembrane protein 108##NM_023943|TMEM108|66000|transmembrane protein 108##AY358381|TMEM108|66000|transmembrane protein 108##BC000568|TMEM108|66000|transmembrane protein 108##NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin##HQ258421|BFSP2|8419|beaded filament structural protein 2, phakinin##U48224|BFSP2|8419|beaded filament structural protein 2, phakinin	0.217169	CTCF.p2:-16:0.217
chr6	6788766	6788883	reg1018280.p1	7.967	+	BC039678 TSC_hg19_v1_chr6_+_6725205	-63663	+	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	-199874	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-467914	-	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	319002	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	319211	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	319399	+	NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1	0.0	
chr9	14428903	14429033	reg1016013.p2	7.967	+	AK131233 NM_001190738	-29987	-	TSC_hg19_v1_chr9_-_14314141 BX648845 NM_001190737 NM_005596	-114878	-	TSC_hg19_v1_chr9_-_14313945 U70862	-115016	-	AF161360 TSC_hg19_v1_chr9_-_14693311 AK292960	264352	-	TSC_hg19_v1_chr9_-_14693475 BC042558 NM_178566	264501	-	AF400435 BC069371 BC069405 BC069491 BC069503 BC103976 BC103977 CU686794 CU686860 NM_005454	293723	-	AK131233|NFIB|4781|nuclear factor I/B##NM_001190738|NFIB|4781|nuclear factor I/B##BX648845|NFIB|4781|nuclear factor I/B##NM_001190737|NFIB|4781|nuclear factor I/B##NM_005596|NFIB|4781|nuclear factor I/B##U70862|NFIB|4781|nuclear factor I/B##AF161360|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AK292960|ZDHHC21|340481|zinc finger, DHHC-type containing 21##BC042558|ZDHHC21|340481|zinc finger, DHHC-type containing 21##NM_178566|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AF400435|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069371|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069405|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069491|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069503|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC103976|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC103977|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##NM_005454|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)	0.999678	CTCF.p2:-10:1.000
chr12	47327859	47327992	reg1017707.p1	7.966	+	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	-108169	-	TSC_hg19_v1_chr12_-_46766619 NM_018976	-561322	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-561636	-	TSC_hg19_v1_chr12_+_47473404 BC072670	145472	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	145658	-	BC008360 NM_138371	282126	+	AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC008360|FAM113B|91523|family with sequence similarity 113, member B##NM_138371|FAM113B|91523|family with sequence similarity 113, member B	0.580622	CTCF.p2:21:0.581
chr7	86689138	86689261	reg1015044.p1	7.966	+	TSC_hg19_v1_chr7_-_86688965 NM_001142749	-221	-	AK296250 NM_152748	-93953	-	X77748 TSC_hg19_v1_chr7_+_86274130 DQ315361 DQ315362 DQ315363	-415083	+	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	92514	+	NM_021145 TSC_hg19_v1_chr7_+_86781946 BC070064	92738	+	BT006973 TSC_hg19_v1_chr7_-_86849049 BC002837 NM_024315 AK313794	159742	-	NM_001142749|KIAA1324L|222223|KIAA1324-like##AK296250|KIAA1324L|222223|KIAA1324-like##NM_152748|KIAA1324L|222223|KIAA1324-like##X77748|GRM3|2913|glutamate receptor, metabotropic 3##DQ315361|GRM3|2913|glutamate receptor, metabotropic 3##DQ315362|GRM3|2913|glutamate receptor, metabotropic 3##DQ315363|GRM3|2913|glutamate receptor, metabotropic 3##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_021145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BC070064|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BT006973|C7orf23|79161|chromosome 7 open reading frame 23##BC002837|C7orf23|79161|chromosome 7 open reading frame 23##NM_024315|C7orf23|79161|chromosome 7 open reading frame 23##AK313794|C7orf23|79161|chromosome 7 open reading frame 23	0.0	
chr10	6309173	6309354	reg1015683.p1	7.965	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-64387	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-122351	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-122379	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	312998	-	TSC_hg19_v1_chr10_+_6622460 AY007155	313217	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	1141987	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.0	
chr14	94465996	94466137	reg1016331.p1	7.965	+	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	-22990	-	AK303686 TSC_hg19_v1_chr14_-_94442905	-23158	-	AB056723 NM_016150	-42300	-	TSC_hg19_v1_chr14_+_94492685 BC009615 BC068058 NM_023112	26637	+	AK025569 TSC_hg19_v1_chr14_+_94492747	26682	+	AB209382 AF161446 AK294613 TSC_hg19_v1_chr14_-_94547557 BC096826 AL136886 BC008847 BC009406 BX537533 AK296726 AK297232 AK304504 AK025162 AF214731 NM_020414	81460	-	AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##AK025569|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##AB209382|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AF161446|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK294613|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC096826|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AL136886|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC008847|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC009406|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BX537533|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK296726|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK297232|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK304504|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK025162|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AF214731|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##NM_020414|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24	0.934023	CTCF.p2:-8:0.934
chr16	56390423	56390558	reg1018844.p1	7.965	+	AK056008 TSC_hg19_v1_chr16_+_56225314	-165180	+	NM_020988 NM_138736 TSC_hg19_v1_chr16_+_56225253	-165239	+	AK294334 NM_001190158	-400548	-	AF124145 TSC_hg19_v1_chr16_-_56459357	68839	-	TSC_hg19_v1_chr16_-_56459390 NM_001144 BC069197	68933	-	AJ001810 CR456919 AB590091 AM392991 AM393219 DQ892142 DQ895336 TSC_hg19_v1_chr16_-_56485242 BC001403 BX647665 NM_007006 AK312721 BX537360	94720	-	AK056008|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_020988|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_138736|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##AK294334|CES5A|221223|carboxylesterase 5A##NM_001190158|CES5A|221223|carboxylesterase 5A##AF124145|AMFR|267|autocrine motility factor receptor##NM_001144|AMFR|267|autocrine motility factor receptor##BC069197|AMFR|267|autocrine motility factor receptor##AJ001810|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##CR456919|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AM392991|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AM393219|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ892142|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ895336|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BC001403|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BX647665|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##NM_007006|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AK312721|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BX537360|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	0.432551	CTCF.p2:12:0.433
chr17	79977939	79978065	reg1017052.p1	7.965	+	TSC_hg19_v1_chr17_+_79935513 AF324219 AK290624 AK057851 BC018722 CU676290 DQ892522 DQ895734 AK226086	-42480	+	TSC_hg19_v1_chr17_+_79935477 AK057403 NM_001251888 NM_024083	-42554	+	NM_178493 TSC_hg19_v1_chr17_-_79919064 BC060882	-58940	-	TSC_hg19_v1_chr17_-_79980755 BC011610 U95006 U95007 BC009571 NM_144998	2729	-	TSC_hg19_v1_chr17_+_79981196 BC014109 NM_144999	3231	+	TSC_hg19_v1_chr17_+_79989582 BC009605 BC015197 NM_005052 AF008591 AB528368 DQ893123 DQ896400 CU679415 AF498966 BT019443	11559	+	AF324219|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK290624|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK057851|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##BC018722|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##DQ892522|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##DQ895734|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK226086|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK057403|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##NM_001251888|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##NM_024083|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##NM_178493|NOTUM|147111|notum pectinacetylesterase homolog (Drosophila)##BC060882|NOTUM|147111|notum pectinacetylesterase homolog (Drosophila)##BC011610|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##U95006|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##U95007|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##BC009571|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##NM_144998|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##BC014109|LRRC45|201255|leucine rich repeat containing 45##NM_144999|LRRC45|201255|leucine rich repeat containing 45##BC009605|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##BC015197|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##NM_005052|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##AF008591|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##DQ893123|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##DQ896400|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##AF498966|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##BT019443|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)	0.997156	CTCF.p2:-16:0.997
chr1	157475553	157475682	reg1016777.p1	7.964	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-367334	-	TSC_hg19_v1_chr1_-_157108158 L16464	-367467	-	AK131392 NM_001004341	-406018	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	46613	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	92184	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	194910	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.79361	CTCF.p2:20:0.794
chr12	64066455	64066607	reg1018413.p2	7.963	+	BC125215 BC125216 TSC_hg19_v1_chr12_-_64062283 AY358792 AL833344 AK310102 AK057511 BC068442 NM_173812	-4235	-	NM_000706	-519942	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	-521860	-	TSC_hg19_v1_chr12_+_64173629 AB015633 NM_014254 BC013152 BC002596 AK289382 CU680528 DQ891077 DQ894259	107136	+	BX647105 BX647419 TSC_hg19_v1_chr12_+_64173925	107404	+	TSC_hg19_v1_chr12_+_64237847 BC065032	171195	+	BC125215|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC125216|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AY358792|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AL833344|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK310102|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK057511|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC068442|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_173812|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_000706|AVPR1A|552|arginine vasopressin receptor 1A##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A##AB015633|TMEM5|10329|transmembrane protein 5##NM_014254|TMEM5|10329|transmembrane protein 5##BC013152|TMEM5|10329|transmembrane protein 5##BC002596|TMEM5|10329|transmembrane protein 5##AK289382|TMEM5|10329|transmembrane protein 5##DQ891077|TMEM5|10329|transmembrane protein 5##DQ894259|TMEM5|10329|transmembrane protein 5##BX647105|TMEM5|10329|transmembrane protein 5##BX647419|TMEM5|10329|transmembrane protein 5	0.998077	CTCF.p2:5:0.998
chr6	18596590	18596710	reg1015459.p1	7.963	+	AK096832 NM_182757 AB076367 BC063311 AL832329	-208983	+	X64229 TSC_hg19_v1_chr6_-_18264759 BC012442 AK312616 AK298089 AK294079 BC035259 AK297749 NM_001134709 NM_003472	-331929	-	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	-440995	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	1240985	+	TSC_hg19_v1_chr6_+_19838612 AF085889	1242033	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	1616022	-	AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##X64229|DEK|7913|DEK oncogene##BC012442|DEK|7913|DEK oncogene##AK312616|DEK|7913|DEK oncogene##AK298089|DEK|7913|DEK oncogene##AK294079|DEK|7913|DEK oncogene##BC035259|DEK|7913|DEK oncogene##AK297749|DEK|7913|DEK oncogene##NM_001134709|DEK|7913|DEK oncogene##NM_003472|DEK|7913|DEK oncogene##BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1	0.966946	CTCF.p2:3:0.967
chr9	136591574	136591654	reg1016745.p1	7.963	+	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-90106	+	AB528863 BC146946 BC146961 NM_001080515	-146259	-	TSC_hg19_v1_chr9_+_136399879 BC050544 NM_014694	-191689	+	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	11864	-	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	13372	-	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	265832	-	NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC146946|FAM163B|642968|family with sequence similarity 163, member B##BC146961|FAM163B|642968|family with sequence similarity 163, member B##NM_001080515|FAM163B|642968|family with sequence similarity 163, member B##BC050544|ADAMTSL2|9719|ADAMTS-like 2##NM_014694|ADAMTSL2|9719|ADAMTS-like 2##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor	0.679926	CTCF.p2:6:0.680
chr20	58146714	58146851	reg1019486.p1	7.962	+	TSC_hg19_v1_chr20_+_57875665 J05081 X52001 AB590897 CU679163 BT007085 DQ096281	-271025	+	BC008876 TSC_hg19_v1_chr20_+_57875490 BC053866 NM_000114 NM_207032 NM_207033 NM_207034	-271293	+	NM_178457	-380708	+	AK098788 NM_001199505	5781	+	BC108303 AJ311122 NM_080672 TSC_hg19_v1_chr20_+_58179660 BC117362 BC117364	32872	+	AJ617581 NM_001199506 AK316047	104934	+	J05081|EDN3|1908|endothelin 3##X52001|EDN3|1908|endothelin 3##BT007085|EDN3|1908|endothelin 3##DQ096281|EDN3|1908|endothelin 3##BC008876|EDN3|1908|endothelin 3##BC053866|EDN3|1908|endothelin 3##NM_000114|EDN3|1908|endothelin 3##NM_207032|EDN3|1908|endothelin 3##NM_207033|EDN3|1908|endothelin 3##NM_207034|EDN3|1908|endothelin 3##NM_178457|ZNF831|128611|zinc finger protein 831##AK098788|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199505|PHACTR3|116154|phosphatase and actin regulator 3##BC108303|PHACTR3|116154|phosphatase and actin regulator 3##AJ311122|PHACTR3|116154|phosphatase and actin regulator 3##NM_080672|PHACTR3|116154|phosphatase and actin regulator 3##BC117362|PHACTR3|116154|phosphatase and actin regulator 3##BC117364|PHACTR3|116154|phosphatase and actin regulator 3##AJ617581|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199506|PHACTR3|116154|phosphatase and actin regulator 3##AK316047|PHACTR3|116154|phosphatase and actin regulator 3	0.965033	CTCF.p2:-6:0.965
chr4	174415648	174415762	reg1016275.p2	7.962	+	AJ224677 NM_007281	-95089	-	TSC_hg19_v1_chr4_+_174292104 BC016757	-123597	+	TSC_hg19_v1_chr4_+_174292088 NM_003864 AF055993	-123642	+	AF087940 TSC_hg19_v1_chr4_-_174450385 AB464563	34686	-	BC101406 BC101974 BC109383 TSC_hg19_v1_chr4_-_174450570	34845	-	TSC_hg19_v1_chr4_-_174451381 NM_021973 AK122739 FJ226608	35664	-	AJ224677|SCRG1|11341|stimulator of chondrogenesis 1##NM_007281|SCRG1|11341|stimulator of chondrogenesis 1##BC016757|SAP30|8819|Sin3A-associated protein, 30kDa##NM_003864|SAP30|8819|Sin3A-associated protein, 30kDa##AF055993|SAP30|8819|Sin3A-associated protein, 30kDa##AF087940|HAND2|9464|heart and neural crest derivatives expressed 2##BC101406|HAND2|9464|heart and neural crest derivatives expressed 2##BC101974|HAND2|9464|heart and neural crest derivatives expressed 2##BC109383|HAND2|9464|heart and neural crest derivatives expressed 2##NM_021973|HAND2|9464|heart and neural crest derivatives expressed 2##AK122739|HAND2|9464|heart and neural crest derivatives expressed 2##FJ226608|HAND2|9464|heart and neural crest derivatives expressed 2	0.0	
chr5	170065857	170065988	reg1017652.p2	7.962	+	TSC_hg19_v1_chr5_+_169931023 BC035032 NM_001034837 NM_014592	-134887	+	BC025707 NM_004137 AK313979	-249275	-	TSC_hg19_v1_chr5_+_169816493 AK311026	-249426	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	144832	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	223009	+	TSC_hg19_v1_chr5_+_170289029 AJ271459 AJ288952 AJ288953 AJ288954 AJ288955 BC030953 AF222747 AB527205 AL832980	223100	+	BC035032|KCNIP1|30820|Kv channel interacting protein 1##NM_001034837|KCNIP1|30820|Kv channel interacting protein 1##NM_014592|KCNIP1|30820|Kv channel interacting protein 1##BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17##AJ271459|RANBP17|64901|RAN binding protein 17##AJ288952|RANBP17|64901|RAN binding protein 17##AJ288953|RANBP17|64901|RAN binding protein 17##AJ288954|RANBP17|64901|RAN binding protein 17##AJ288955|RANBP17|64901|RAN binding protein 17##BC030953|RANBP17|64901|RAN binding protein 17##AF222747|RANBP17|64901|RAN binding protein 17##AL832980|RANBP17|64901|RAN binding protein 17	0.999909	CTCF.p2:-30:1.000
chr5	53530490	53530632	reg1019044.p1	7.962	+	TSC_hg19_v1_chr5_+_52856474 AF020351 AK307973 CU675075	-674075	+	TSC_hg19_v1_chr5_+_52856468 NM_002495 BC005270	-674097	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	-754011	+	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	75764	-	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	75841	-	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	220963	+	AF020351|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK307973|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##NM_002495|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##BC005270|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3	0.372606	CTCF.p2:18:0.373
chr7	117899296	117899428	reg1015695.p1	7.962	+	NM_019644 AK302407	-34628	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-75191	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-385819	-	AK307139 AB028967 NM_012281	2014342	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	2598658	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	2598798	-	NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12	0.0	
chr1	66909557	66909690	reg1018774.p1	7.961	+	TSC_hg19_v1_chr1_+_66798096 AK294441	-111528	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	-111770	+	AB209081 NM_001037340 AK290006	-451220	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	90261	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	308501	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	308542	+	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1	0.010947	
chr19	50184074	50184200	reg1016102.p1	7.961	+	AK295973 TSC_hg19_v1_chr19_+_50180493 AB590883 BC019268 AY775289 D66904 Y10805 Y10806 Y10807 BC109282 BC109283	-3616	+	AK304660 NM_001207042 NM_001536 NM_198318 TSC_hg19_v1_chr19_+_50180491	-3688	+	AB590882 TSC_hg19_v1_chr19_+_50169270 BC007724	-14950	+	BC032764 NM_001101340	7793	+	AL359598 TSC_hg19_v1_chr19_+_50192561	8363	+	TSC_hg19_v1_chr19_+_50194384 NM_001136052 NM_001199752 NM_001199753 NM_152359 AK096516 AK289713 AK309087 AK290092 BC029104 AF357970	10249	+	AK295973|PRMT1|3276|protein arginine methyltransferase 1##BC019268|PRMT1|3276|protein arginine methyltransferase 1##AY775289|PRMT1|3276|protein arginine methyltransferase 1##D66904|PRMT1|3276|protein arginine methyltransferase 1##Y10805|PRMT1|3276|protein arginine methyltransferase 1##Y10806|PRMT1|3276|protein arginine methyltransferase 1##Y10807|PRMT1|3276|protein arginine methyltransferase 1##BC109282|PRMT1|3276|protein arginine methyltransferase 1##BC109283|PRMT1|3276|protein arginine methyltransferase 1##AK304660|PRMT1|3276|protein arginine methyltransferase 1##NM_001207042|PRMT1|3276|protein arginine methyltransferase 1##NM_001536|PRMT1|3276|protein arginine methyltransferase 1##NM_198318|PRMT1|3276|protein arginine methyltransferase 1##BC007724|BCL2L12|83596|BCL2-like 12 (proline rich)##BC032764|C19orf76|199800|chromosome 19 open reading frame 76##NM_001101340|C19orf76|199800|chromosome 19 open reading frame 76##AL359598|C19orf76|199800|chromosome 19 open reading frame 76##NM_001136052|CPT1C|126129|carnitine palmitoyltransferase 1C##NM_001199752|CPT1C|126129|carnitine palmitoyltransferase 1C##NM_001199753|CPT1C|126129|carnitine palmitoyltransferase 1C##NM_152359|CPT1C|126129|carnitine palmitoyltransferase 1C##AK096516|CPT1C|126129|carnitine palmitoyltransferase 1C##AK289713|CPT1C|126129|carnitine palmitoyltransferase 1C##AK309087|CPT1C|126129|carnitine palmitoyltransferase 1C##AK290092|CPT1C|126129|carnitine palmitoyltransferase 1C##BC029104|CPT1C|126129|carnitine palmitoyltransferase 1C##AF357970|CPT1C|126129|carnitine palmitoyltransferase 1C	0.994226	CTCF.p2:-1:0.994
chr5	141394842	141394983	reg1016445.p1	7.961	+	D31766 TSC_hg19_v1_chr5_-_141392593 AK290686 AK022779 AK296452 BC020769 BC022322 NM_005471	-2334	-	TSC_hg19_v1_chr5_+_141348760 BX647955	-46158	+	TSC_hg19_v1_chr5_+_141348705 AK023698 AK023884 AK294262 NM_183401	-46209	+	AK075495 TSC_hg19_v1_chr5_+_141488283	93339	+	TSC_hg19_v1_chr5_+_141488343 NM_030571 AK315481 AY192728	93436	+	AK075524 TSC_hg19_v1_chr5_+_141488384	93472	+	D31766|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##AK290686|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##AK022779|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##AK296452|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##BC020769|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##BC022322|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##NM_005471|GNPDA1|10007|glucosamine-6-phosphate deaminase 1##BX647955|RNF14|9604|ring finger protein 14##AK023698|RNF14|9604|ring finger protein 14##AK023884|RNF14|9604|ring finger protein 14##AK294262|RNF14|9604|ring finger protein 14##NM_183401|RNF14|9604|ring finger protein 14##AK075495|NDFIP1|80762|Nedd4 family interacting protein 1##NM_030571|NDFIP1|80762|Nedd4 family interacting protein 1##AK315481|NDFIP1|80762|Nedd4 family interacting protein 1##AY192728|NDFIP1|80762|Nedd4 family interacting protein 1##AK075524|NDFIP1|80762|Nedd4 family interacting protein 1	0.622996	CTCF.p2:-18:0.623
chrX	103588500	103588626	reg1017122.p1	7.960	+	BC042633 AY114148 BC053599 NM_153448 AK097704	-88977	-	TSC_hg19_v1_chrX_+_103411251 BC017665	-177296	+	TSC_hg19_v1_chrX_+_103411133 AK091221 AX746858 BC057847 NM_207318	-177439	+	AK290196 TSC_hg19_v1_chrX_+_103810879	222316	+	TSC_hg19_v1_chrX_+_103810991 AJ272208 NM_017416	222429	+	BC108734 AF285597 BC042547 NM_031274	876790	-	BC042633|ESX1|80712|ESX homeobox 1##AY114148|ESX1|80712|ESX homeobox 1##BC053599|ESX1|80712|ESX homeobox 1##NM_153448|ESX1|80712|ESX homeobox 1##AK097704|ESX1|80712|ESX homeobox 1##BC017665|FAM199X|139231|family with sequence similarity 199, X-linked##AK091221|FAM199X|139231|family with sequence similarity 199, X-linked##BC057847|FAM199X|139231|family with sequence similarity 199, X-linked##NM_207318|FAM199X|139231|family with sequence similarity 199, X-linked##AK290196|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##AJ272208|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##NM_017416|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##BC108734|TEX13A|56157|testis expressed 13A##AF285597|TEX13A|56157|testis expressed 13A##BC042547|TEX13A|56157|testis expressed 13A##NM_031274|TEX13A|56157|testis expressed 13A	0.983834	CTCF.p2:5:0.984
chr13	100180940	100181073	reg1017284.p2	7.959	+	TSC_hg19_v1_chr13_+_100153777 BC130293	-27224	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	-27306	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-221308	-	BC041830 TSC_hg19_v1_chr13_+_100229390	48371	+	TSC_hg19_v1_chr13_+_100258943 NM_206808 AK300510 BC034360 AK095506 AF428253 CU689862	77914	+	AF378304 NM_033132	443163	-	BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##NM_206808|CLYBL|171425|citrate lyase beta like##AK300510|CLYBL|171425|citrate lyase beta like##BC034360|CLYBL|171425|citrate lyase beta like##AK095506|CLYBL|171425|citrate lyase beta like##AF428253|CLYBL|171425|citrate lyase beta like##AF378304|ZIC5|85416|Zic family member 5##NM_033132|ZIC5|85416|Zic family member 5	0.068939	
chr13	102794094	102794241	reg1017395.p2	7.959	+	NM_004115 U66200	-225173	-	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	-689172	+	TSC_hg19_v1_chr13_-_102068838 BC028390	-725327	-	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	259908	-	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	455169	+	HQ258371 NM_001010977 BC132748 BC132750	552691	-	NM_004115|FGF14|2259|fibroblast growth factor 14##U66200|FGF14|2259|fibroblast growth factor 14##AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC028390|NALCN|259232|sodium leak channel, non-selective##BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II##HQ258371|METTL21C|196541|methyltransferase like 21C##NM_001010977|METTL21C|196541|methyltransferase like 21C##BC132748|METTL21C|196541|methyltransferase like 21C##BC132750|METTL21C|196541|methyltransferase like 21C	0.998846	CTCF.p2:-2:0.999
chr1	62317928	62318044	reg1018044.p2	7.959	+	TSC_hg19_v1_chr1_+_62208151 AJ001306 AJ224747 AJ224748 NM_176877 AK307713 AK308428 BC142661 BC142723	-109836	+	AF353990 NM_032027	-126892	-	TSC_hg19_v1_chr1_-_62190806 BC048995 BC029486	-127167	-	NM_001164835 NM_019079 BC012555 BC060808 AB211065 AL834314 AK001973 BC111559	342530	+	AK091941 AX747268 TSC_hg19_v1_chr1_-_62785028	467013	-	TSC_hg19_v1_chr1_-_62785084 AB284127 BC060866 NM_181712	467093	-	AJ001306|INADL|10207|InaD-like (Drosophila)##AJ224747|INADL|10207|InaD-like (Drosophila)##AJ224748|INADL|10207|InaD-like (Drosophila)##NM_176877|INADL|10207|InaD-like (Drosophila)##AK307713|INADL|10207|InaD-like (Drosophila)##AK308428|INADL|10207|InaD-like (Drosophila)##BC142661|INADL|10207|InaD-like (Drosophila)##BC142723|INADL|10207|InaD-like (Drosophila)##AF353990|TM2D1|83941|TM2 domain containing 1##NM_032027|TM2D1|83941|TM2 domain containing 1##BC048995|TM2D1|83941|TM2 domain containing 1##BC029486|TM2D1|83941|TM2 domain containing 1##NM_001164835|L1TD1|54596|LINE-1 type transposase domain containing 1##NM_019079|L1TD1|54596|LINE-1 type transposase domain containing 1##BC012555|L1TD1|54596|LINE-1 type transposase domain containing 1##BC060808|L1TD1|54596|LINE-1 type transposase domain containing 1##AB211065|L1TD1|54596|LINE-1 type transposase domain containing 1##AL834314|L1TD1|54596|LINE-1 type transposase domain containing 1##AK001973|L1TD1|54596|LINE-1 type transposase domain containing 1##BC111559|L1TD1|54596|LINE-1 type transposase domain containing 1##AK091941|KANK4|163782|KN motif and ankyrin repeat domains 4##AB284127|KANK4|163782|KN motif and ankyrin repeat domains 4##BC060866|KANK4|163782|KN motif and ankyrin repeat domains 4##NM_181712|KANK4|163782|KN motif and ankyrin repeat domains 4	0.987252	CTCF.p2:3:0.987
chr20	13283419	13283524	reg1016837.p2	7.959	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	-81048	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	-293830	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-1384914	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	336093	-	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	482070	-	TSC_hg19_v1_chr20_+_13765698 NM_001039375 NM_024120 AK289781 AK091060 AX746757 BC073158 CU687252 BC005984	482282	+	NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_001039375|C20orf7|79133|chromosome 20 open reading frame 7##NM_024120|C20orf7|79133|chromosome 20 open reading frame 7##AK289781|C20orf7|79133|chromosome 20 open reading frame 7##AK091060|C20orf7|79133|chromosome 20 open reading frame 7##BC073158|C20orf7|79133|chromosome 20 open reading frame 7##BC005984|C20orf7|79133|chromosome 20 open reading frame 7	0.894742	CTCF.p2:-1:0.895
chr22	32598536	32598656	reg1021202.p1	7.959	+	CR456563 NM_001159546	-80	-	BC069827 BC069737 AJ010231 NM_006605	-9171	-	BC139845 CU012997 CU013285 AB527618 CR456485 NM_001010859 BC040263	-43342	-	AK055999 NM_001098527	867	-	BC051910 NM_001159545	2121	-	NM_014227 AB527216 AJ133127	52721	-	CR456563|RFPL2|10739|ret finger protein-like 2##NM_001159546|RFPL2|10739|ret finger protein-like 2##BC069827|RFPL2|10739|ret finger protein-like 2##BC069737|RFPL2|10739|ret finger protein-like 2##AJ010231|RFPL2|10739|ret finger protein-like 2##NM_006605|RFPL2|10739|ret finger protein-like 2##BC139845|C22orf42|150297|chromosome 22 open reading frame 42##CR456485|C22orf42|150297|chromosome 22 open reading frame 42##NM_001010859|C22orf42|150297|chromosome 22 open reading frame 42##BC040263|C22orf42|150297|chromosome 22 open reading frame 42##AK055999|RFPL2|10739|ret finger protein-like 2##NM_001098527|RFPL2|10739|ret finger protein-like 2##BC051910|RFPL2|10739|ret finger protein-like 2##NM_001159545|RFPL2|10739|ret finger protein-like 2##NM_014227|SLC5A4|6527|solute carrier family 5 (low affinity glucose cotransporter), member 4##AJ133127|SLC5A4|6527|solute carrier family 5 (low affinity glucose cotransporter), member 4	0.943326	CTCF.p2:-2:0.943
chr6	130615099	130615223	reg1015966.p1	7.959	+	AK091882 AX747235 NM_001017373	-71063	-	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	-78706	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	-275436	+	AB052099 NM_052913	143100	+	BC113027 NM_001195597 AK091900 AX747243 BC101422 BC101423 BC101424 BC101425 BC113026 TSC_hg19_v1_chr6_+_131148577	533401	+	TSC_hg19_v1_chr6_-_131291480 AK307764 NM_001199389	676390	-	AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A##BC113027|LOC100507203|100507203|uncharacterized LOC100507203##NM_001195597|LOC100507203|100507203|uncharacterized LOC100507203##AK091900|LOC100507203|100507203|uncharacterized LOC100507203##BC101422|LOC100507203|100507203|uncharacterized LOC100507203##BC101423|LOC100507203|100507203|uncharacterized LOC100507203##BC101424|LOC100507203|100507203|uncharacterized LOC100507203##BC101425|LOC100507203|100507203|uncharacterized LOC100507203##BC113026|LOC100507203|100507203|uncharacterized LOC100507203##AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	0.995176	CTCF.p2:-28:0.995
chr1	219717643	219717800	reg1016385.p1	7.958	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-370479	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-370563	+	M19154 TSC_hg19_v1_chr1_+_218519634	-1198116	+	BC036078 TSC_hg19_v1_chr1_-_220101540	383808	-	AB464233 TSC_hg19_v1_chr1_-_220101784	384070	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	384244	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.0	
chr12	22612930	22613049	reg1017614.p2	7.958	+	BC117285 BC126162 BC031081 BC046158 AK315340 EU041716 NM_003034 X77922 TSC_hg19_v1_chr12_-_22487789	-125309	-	AF271388 TSC_hg19_v1_chr12_+_22199226 AF397212	-413760	+	TSC_hg19_v1_chr12_+_22199207 BC016609 NM_018686 AL832975 AK022927 AK222981	-413817	+	AB385344 AB011100 BC042498 TSC_hg19_v1_chr12_-_22697128 AK299353	84150	-	BC117143 BC143859 BC143860 BC143878 TSC_hg19_v1_chr12_-_22697430 AK295862	84400	-	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	84477	-	BC117285|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC126162|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC031081|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC046158|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AK315340|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##EU041716|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##NM_003034|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##X77922|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##BC016609|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##NM_018686|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AL832975|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK022927|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK222981|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AB011100|KIAA0528|9847|KIAA0528##BC042498|KIAA0528|9847|KIAA0528##AK299353|KIAA0528|9847|KIAA0528##BC117143|KIAA0528|9847|KIAA0528##BC143859|KIAA0528|9847|KIAA0528##BC143860|KIAA0528|9847|KIAA0528##BC143878|KIAA0528|9847|KIAA0528##AK295862|KIAA0528|9847|KIAA0528##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528	0.980317	CTCF.p2:14:0.980
chr4	144480167	144480280	reg1016139.p1	7.958	+	AB384709 TSC_hg19_v1_chr4_+_144435139	-45109	+	TSC_hg19_v1_chr4_+_144434860 NM_003601 AK316444 AK302841 BC023144 AB010882 AK308424	-45495	+	NM_002039 NM_207123 AK289767 BC064848	-222208	+	TSC_hg19_v1_chr4_+_144480613 AX721285 AX721289 BC025996	393	+	NM_001168235	141604	-	EU176664 BC064396 BC017864 M29610 NM_002102 NM_198682	346464	-	NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##NM_002039|GAB1|2549|GRB2-associated binding protein 1##NM_207123|GAB1|2549|GRB2-associated binding protein 1##AK289767|GAB1|2549|GRB2-associated binding protein 1##BC064848|GAB1|2549|GRB2-associated binding protein 1##BC025996|GUSBP5|441046|glucuronidase, beta pseudogene 5##NM_001168235|FREM3|166752|FRAS1 related extracellular matrix 3##EU176664|GYPE|2996|glycophorin E (MNS blood group)##BC064396|GYPE|2996|glycophorin E (MNS blood group)##BC017864|GYPE|2996|glycophorin E (MNS blood group)##M29610|GYPE|2996|glycophorin E (MNS blood group)##NM_002102|GYPE|2996|glycophorin E (MNS blood group)##NM_198682|GYPE|2996|glycophorin E (MNS blood group)	0.763301	CTCF.p2:16:0.663
chr15	55727555	55727676	reg1018514.p1	7.957	+	NM_001198784 AK130862 BX648577	-26820	+	AK292795 BC039871 TSC_hg19_v1_chr15_-_55700478 BC027621 AB033080 AK022459 BC015203 NM_004748 NM_001204450 NM_001204451 NM_020739	-27034	-	TSC_hg19_v1_chr15_-_55652777 AF011794	-74809	-	AF337549 NM_001033559 NM_001033560 NM_130810	72816	-	EF625686 TSC_hg19_v1_chr15_-_55880544	152917	-	AF457207 NM_015617	153434	-	NM_001198784|FLJ27352|145788|uncharacterized LOC145788##AK130862|FLJ27352|145788|uncharacterized LOC145788##BX648577|FLJ27352|145788|uncharacterized LOC145788##AK292795|CCPG1|9236|cell cycle progression 1##BC039871|CCPG1|9236|cell cycle progression 1##BC027621|CCPG1|9236|cell cycle progression 1##AB033080|CCPG1|9236|cell cycle progression 1##AK022459|CCPG1|9236|cell cycle progression 1##BC015203|CCPG1|9236|cell cycle progression 1##NM_004748|CCPG1|9236|cell cycle progression 1##NM_001204450|CCPG1|9236|cell cycle progression 1##NM_001204451|CCPG1|9236|cell cycle progression 1##NM_020739|CCPG1|9236|cell cycle progression 1##AF011794|CCPG1|9236|cell cycle progression 1##AF337549|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001033559|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001033560|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_130810|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##EF625686|PYGO1|26108|pygopus homolog 1 (Drosophila)##AF457207|PYGO1|26108|pygopus homolog 1 (Drosophila)##NM_015617|PYGO1|26108|pygopus homolog 1 (Drosophila)	0.824473	CTCF.p2:7:0.824
chr5	14352341	14352457	reg1016108.p1	7.957	+	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	-208727	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-340529	-	AX800026 AY045575 NM_001369	-407811	-	TSC_hg19_v1_chr5_+_14488527 AK131423	136140	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	229501	+	TSC_hg19_v1_chr5_+_14581949 AK001989 BC011524 CU679940	229565	+	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A##AK001989|FAM105A|54491|family with sequence similarity 105, member A##BC011524|FAM105A|54491|family with sequence similarity 105, member A	0.999326	CTCF.p2:-16:0.999
chr7	45961887	45962035	reg1019497.p1	7.957	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-1155	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-28827	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-33856	+	TSC_hg19_v1_chr7_-_47579207 BC071791	1617248	-	TSC_hg19_v1_chr7_-_47621681 CR749644	1659702	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	1659822	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.18786	
chr10	134350749	134350901	reg1018548.p1	7.956	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-92142	+	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	-140116	+	TSC_hg19_v1_chr10_+_134145696 AK098652 BC050097 AK295953 AB051461 BC029902 NM_001143757 AK097418	-205115	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	487	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	248681	-	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	405213	-	BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##AK098652|LRRC27|80313|leucine rich repeat containing 27##BC050097|LRRC27|80313|leucine rich repeat containing 27##AK295953|LRRC27|80313|leucine rich repeat containing 27##AB051461|LRRC27|80313|leucine rich repeat containing 27##BC029902|LRRC27|80313|leucine rich repeat containing 27##NM_001143757|LRRC27|80313|leucine rich repeat containing 27##AK097418|LRRC27|80313|leucine rich repeat containing 27##BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40	0.0	
chr11	8981218	8981358	reg1017782.p1	7.956	+	NM_020646	-16709	-	BC027865 NM_020643	-26745	-	TSC_hg19_v1_chr11_+_8932895 BC030996 BX648821 AB528705 AF512007	-48346	+	AK074677 TSC_hg19_v1_chr11_-_8985939 AB097017 BC015884 AK310723 AK316216 AK313065	4655	-	TSC_hg19_v1_chr11_-_8985986 AY359069 NM_020644	4687	-	BC040124 TSC_hg19_v1_chr11_-_8986002	4721	-	NM_020646|ASCL3|56676|achaete-scute complex homolog 3 (Drosophila)##BC027865|C11orf16|56673|chromosome 11 open reading frame 16##NM_020643|C11orf16|56673|chromosome 11 open reading frame 16##BC030996|AKIP1|56672|A kinase (PRKA) interacting protein 1##AF512007|AKIP1|56672|A kinase (PRKA) interacting protein 1##AK074677|TMEM9B|56674|TMEM9 domain family, member B##AB097017|TMEM9B|56674|TMEM9 domain family, member B##BC015884|TMEM9B|56674|TMEM9 domain family, member B##AK310723|TMEM9B|56674|TMEM9 domain family, member B##AK316216|TMEM9B|56674|TMEM9 domain family, member B##AK313065|TMEM9B|56674|TMEM9 domain family, member B##AY359069|TMEM9B|56674|TMEM9 domain family, member B##NM_020644|TMEM9B|56674|TMEM9 domain family, member B##BC040124|TMEM9B|56674|TMEM9 domain family, member B	0.510666	CTCF.p2:18:0.511
chr1	211854177	211854317	reg1016803.p1	7.956	+	BT019729 CU688108 AB527570 AY045701 Z29066 AK223353 AK225522 AK303092 TSC_hg19_v1_chr1_-_211848968 U11050 BC043502 BC065932 BC052807 NM_001204182 NM_001204183 NM_002497	-5339	-	TSC_hg19_v1_chr1_-_211752056 BC121015 BC121016 NM_021194	-102159	-	AB451467 TSC_hg19_v1_chr1_-_211752048	-102247	-	BC034621 TSC_hg19_v1_chr1_-_212003681	149501	-	D86960 NM_014873 TSC_hg19_v1_chr1_-_212004119	149883	-	AM392654 CU676544 BC030716 TSC_hg19_v1_chr1_-_212208866 BC033918 AK001363 AK022509 BC009918 BC020523 AK297225 AK001598 NM_001199809 NM_001199811 NM_001199812 NM_015434	354643	-	BT019729|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AY045701|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##Z29066|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK223353|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK225522|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK303092|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##U11050|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC043502|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC065932|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC052807|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204182|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204183|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_002497|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC121015|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121016|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##NM_021194|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC034621|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##AM392654|INTS7|25896|integrator complex subunit 7##BC030716|INTS7|25896|integrator complex subunit 7##BC033918|INTS7|25896|integrator complex subunit 7##AK001363|INTS7|25896|integrator complex subunit 7##AK022509|INTS7|25896|integrator complex subunit 7##BC009918|INTS7|25896|integrator complex subunit 7##BC020523|INTS7|25896|integrator complex subunit 7##AK297225|INTS7|25896|integrator complex subunit 7##AK001598|INTS7|25896|integrator complex subunit 7##NM_001199809|INTS7|25896|integrator complex subunit 7##NM_001199811|INTS7|25896|integrator complex subunit 7##NM_001199812|INTS7|25896|integrator complex subunit 7##NM_015434|INTS7|25896|integrator complex subunit 7	0.728376	CTCF.p2:-17:0.728
chr1	29524169	29524282	reg1017759.p1	7.956	+	NM_005626 TSC_hg19_v1_chr1_-_29508638	-15586	-	TSC_hg19_v1_chr1_-_29508396 AK310528 AK293706 AK223444	-15827	-	AK291509 BC002781 TSC_hg19_v1_chr1_-_29508360	-15859	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	33155	-	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	33222	-	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	38823	+	NM_005626|SRSF4|6429|serine/arginine-rich splicing factor 4##AK310528|SRSF4|6429|serine/arginine-rich splicing factor 4##AK293706|SRSF4|6429|serine/arginine-rich splicing factor 4##AK223444|SRSF4|6429|serine/arginine-rich splicing factor 4##AK291509|SRSF4|6429|serine/arginine-rich splicing factor 4##BC002781|SRSF4|6429|serine/arginine-rich splicing factor 4##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U	0.982766	CTCF.p2:-3:0.983
chr2	172203741	172203921	reg1018083.p1	7.956	+	AK090779 NM_001136554	-116008	-	TSC_hg19_v1_chr2_-_172017431 AK091975 NM_012290	-186332	-	TSC_hg19_v1_chr2_-_172017240 DQ890904 DQ894057 BC032657 D50927 AK292508 AF162666 AB004885	-186735	-	TSC_hg19_v1_chr2_-_172290501 AK124092 BC025250 AK024046	86695	-	TSC_hg19_v1_chr2_+_172290743 AK307877 NM_001164821 NM_025000	86931	+	TSC_hg19_v1_chr2_+_172290824 CR933646	86980	+	AK090779|TLK1|9874|tousled-like kinase 1##NM_001136554|TLK1|9874|tousled-like kinase 1##AK091975|TLK1|9874|tousled-like kinase 1##NM_012290|TLK1|9874|tousled-like kinase 1##DQ890904|TLK1|9874|tousled-like kinase 1##DQ894057|TLK1|9874|tousled-like kinase 1##BC032657|TLK1|9874|tousled-like kinase 1##D50927|TLK1|9874|tousled-like kinase 1##AK292508|TLK1|9874|tousled-like kinase 1##AF162666|TLK1|9874|tousled-like kinase 1##AB004885|TLK1|9874|tousled-like kinase 1##AK124092|METTL8|79828|methyltransferase like 8##BC025250|METTL8|79828|methyltransferase like 8##AK024046|METTL8|79828|methyltransferase like 8##AK307877|DCAF17|80067|DDB1 and CUL4 associated factor 17##NM_001164821|DCAF17|80067|DDB1 and CUL4 associated factor 17##NM_025000|DCAF17|80067|DDB1 and CUL4 associated factor 17##CR933646|DCAF17|80067|DDB1 and CUL4 associated factor 17	0.0	
chr2	215867369	215867482	reg1016378.p2	7.956	+	AB590656 JF790283 JF790285 JF790287 TSC_hg19_v1_chr2_-_215674408 BC126426 BC126428 AX794378 JF790280 JF790281 JF790282 JF790284 U76638 AK314260 AK301843 JF790286 AK223409 NM_000465	-193066	-	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	-590965	+	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	-1718268	+	AY033486 NM_015657	29384	-	BC144073 AY219711 NM_173076	135684	-	NM_004044 TSC_hg19_v1_chr2_+_216176781 AK313066 D82348 AK298142	309313	+	JF790283|BARD1|580|BRCA1 associated RING domain 1##JF790285|BARD1|580|BRCA1 associated RING domain 1##JF790287|BARD1|580|BRCA1 associated RING domain 1##BC126426|BARD1|580|BRCA1 associated RING domain 1##BC126428|BARD1|580|BRCA1 associated RING domain 1##AX794378|BARD1|580|BRCA1 associated RING domain 1##JF790280|BARD1|580|BRCA1 associated RING domain 1##JF790281|BARD1|580|BRCA1 associated RING domain 1##JF790282|BARD1|580|BRCA1 associated RING domain 1##JF790284|BARD1|580|BRCA1 associated RING domain 1##U76638|BARD1|580|BRCA1 associated RING domain 1##AK314260|BARD1|580|BRCA1 associated RING domain 1##AK301843|BARD1|580|BRCA1 associated RING domain 1##JF790286|BARD1|580|BRCA1 associated RING domain 1##AK223409|BARD1|580|BRCA1 associated RING domain 1##NM_000465|BARD1|580|BRCA1 associated RING domain 1##BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##AY033486|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_015657|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##BC144073|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##AY219711|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_173076|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_004044|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK313066|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##D82348|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK298142|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase	0.091102	
chr8	98852265	98852365	reg1014331.p1	7.956	+	TSC_hg19_v1_chr8_+_98788065 BC031021 AK075326 BC014129 AL136942 AK311377 AX810698 AB528832 AF317417 AM392726 AM393691	-64190	+	AY057051 AY261384 NM_018407 AF527412 TSC_hg19_v1_chr8_+_98787993	-64414	+	AK308030 TSC_hg19_v1_chr8_+_98703378	-148937	+	TSC_hg19_v1_chr8_+_98881340 NM_002380 NM_030583 BC010444 AY358895 AK075489 AL833931 AL137638	29014	+	AB591031 X79238 BC032700 TSC_hg19_v1_chr8_-_99057620	205293	-	L05095 TSC_hg19_v1_chr8_-_99057755	205438	-	BC031021|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK075326|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##BC014129|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AL136942|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK311377|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF317417|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AM392726|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AM393691|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AY057051|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AY261384|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##NM_018407|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF527412|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK308030|MTDH|92140|metadherin##NM_002380|MATN2|4147|matrilin 2##NM_030583|MATN2|4147|matrilin 2##BC010444|MATN2|4147|matrilin 2##AY358895|MATN2|4147|matrilin 2##AK075489|MATN2|4147|matrilin 2##AL833931|MATN2|4147|matrilin 2##AL137638|MATN2|4147|matrilin 2##X79238|RPL30|6156|ribosomal protein L30##BC032700|RPL30|6156|ribosomal protein L30##L05095|RPL30|6156|ribosomal protein L30	0.417945	CTCF.p2:-13:0.418
chr17	65821486	65821597	reg1016980.p2	7.955	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	-107491	+	BC007905 NM_012417 NM_181671	-447618	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-447953	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	161	+	AK293224 TSC_hg19_v1_chr17_+_65822221	676	+	TSC_hg19_v1_chr17_+_65822242 AY282495	708	+	BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor##AY282495|BPTF|2186|bromodomain PHD finger transcription factor	0.712584	CTCF.p2:-17:0.713
chr6	123159357	123159498	reg1021633.p1	7.955	+	TSC_hg19_v1_chr6_+_123110402 AK000184 BC018999 BC066591 AK301365 DQ892207 DQ895402 CU676352	-49010	+	NM_006714	-49457	+	AK311867 TSC_hg19_v1_chr6_+_123100861 AK289836 AK307272 AJ002962 AB208815 U51338 D50373 D88648 AL512688 U81235 CR457057 DQ891437 DQ894613 EU176601	-58528	+	TSC_hg19_v1_chr6_+_123317379 AK295158	157956	+	BC101377 BC101376 NM_001010852	158153	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	798662	-	AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK311867|FABP7|2173|fatty acid binding protein 7, brain##AK289836|FABP7|2173|fatty acid binding protein 7, brain##AJ002962|FABP7|2173|fatty acid binding protein 7, brain##U51338|FABP7|2173|fatty acid binding protein 7, brain##D50373|FABP7|2173|fatty acid binding protein 7, brain##D88648|FABP7|2173|fatty acid binding protein 7, brain##AL512688|FABP7|2173|fatty acid binding protein 7, brain##U81235|FABP7|2173|fatty acid binding protein 7, brain##CR457057|FABP7|2173|fatty acid binding protein 7, brain##DQ891437|FABP7|2173|fatty acid binding protein 7, brain##DQ894613|FABP7|2173|fatty acid binding protein 7, brain##EU176601|FABP7|2173|fatty acid binding protein 7, brain##AK295158|CLVS2|134829|clavesin 2##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin	0.031592	
chr13	50659252	50659385	reg1016846.p1	7.954	+	AJ412023 AJ412024 AJ412025 AJ412026 AJ412038 AJ412039 AJ412054 AJ412055 AJ412056 AJ412057 AJ412058 AJ412059 AJ412060 AJ412061 AJ412062 Y15227 TSC_hg19_v1_chr13_+_50656364 BC004131 AK312167 BC020692 AK095311	-2973	+	TSC_hg19_v1_chr13_-_50656128 BC038090 AF264787 Y15228 BC022349 BC006995 BC026275 BC030971 BC070292 BC055417 BC017819 BC022282	-3169	-	AY169387 AY169388 NM_173605 NM_199464 AK313401 AY129654 AY129653 BC020887 BC032343 AY190921 AY190922 AL832695 CU689344 DQ891601 DQ894796	-69809	+	TSC_hg19_v1_chr13_-_50699781 AF380424	40497	-	AJ412041 AJ412042 AJ412043 TSC_hg19_v1_chr13_+_50760088	100735	+	AY357595 BC104892 BC112009 NM_198989 AK303567 AK126830	758634	-	AJ412023|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412024|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412061|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412062|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##Y15227|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC020692|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AK095311|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC038090|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AF264787|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##Y15228|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##BC070292|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##BC055417|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AY169387|KCNRG|283518|potassium channel regulator##AY169388|KCNRG|283518|potassium channel regulator##NM_173605|KCNRG|283518|potassium channel regulator##NM_199464|KCNRG|283518|potassium channel regulator##AK313401|KCNRG|283518|potassium channel regulator##AY129654|KCNRG|283518|potassium channel regulator##AY129653|KCNRG|283518|potassium channel regulator##BC020887|KCNRG|283518|potassium channel regulator##BC032343|KCNRG|283518|potassium channel regulator##AY190921|KCNRG|283518|potassium channel regulator##AY190922|KCNRG|283518|potassium channel regulator##AL832695|TRIM13|10206|tripartite motif containing 13##DQ891601|KCNRG|283518|potassium channel regulator##DQ894796|KCNRG|283518|potassium channel regulator##AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7##AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7	0.98683	CTCF.p2:-4:0.987
chr14	71374008	71374123	reg1014617.p2	7.954	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-98256	-	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	-265456	+	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	-306688	-	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	68	+	TSC_hg19_v1_chr14_+_71374441 BC140784	386	+	AF090989 AF090990 NM_015556	621976	+	AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9##AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	0.016681	
chr5	4862803	4862925	reg1015931.p1	7.954	+	AY335938 NM_024337	-1266697	+	AY249325 NM_178569 BC101608 BC101634 BC143638 BC143639 BC143640 BC171731	-2110563	+	AB188492 NM_001134222 NM_033267 BC065189	-2111093	-	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	277647	+	TSC_hg19_v1_chr5_+_5422777 AK126937	559911	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	560045	+	AY335938|IRX1|79192|iroquois homeobox 1##NM_024337|IRX1|79192|iroquois homeobox 1##AY249325|C5orf38|153571|chromosome 5 open reading frame 38##NM_178569|C5orf38|153571|chromosome 5 open reading frame 38##BC101608|C5orf38|153571|chromosome 5 open reading frame 38##BC101634|C5orf38|153571|chromosome 5 open reading frame 38##BC143638|C5orf38|153571|chromosome 5 open reading frame 38##BC143639|C5orf38|153571|chromosome 5 open reading frame 38##BC143640|C5orf38|153571|chromosome 5 open reading frame 38##BC171731|C5orf38|153571|chromosome 5 open reading frame 38##AB188492|IRX2|153572|iroquois homeobox 2##NM_001134222|IRX2|153572|iroquois homeobox 2##NM_033267|IRX2|153572|iroquois homeobox 2##BC065189|IRX2|153572|iroquois homeobox 2##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947	0.980688	CTCF.p2:-2:0.981
chr9	81216994	81217122	reg1019379.p1	7.954	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	-305000	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	-366028	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-570874	-	TSC_hg19_v1_chr9_+_82186879 NM_007005	969828	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	970466	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	970627	+	AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.585214	CTCF.p2:-2:0.585
chr2	198572462	198572593	reg1017132.p2	7.953	+	NM_138395 TSC_hg19_v1_chr2_+_198570134 AB107013 BC026361 BC126294 AK098121 AK301252 BC009115 HQ258326	-2398	+	AK055136 NM_144629 BC111069 TSC_hg19_v1_chr2_-_198540765	-31852	-	NM_001204094	-191506	+	AF272858 BC033674 AK098824 AK058099 NM_033030	77513	-	NM_197970 AK302817	78459	-	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	96843	+	NM_138395|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AB107013|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC026361|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC126294|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK098121|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK301252|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC009115|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##HQ258326|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK055136|RFTN2|130132|raftlin family member 2##NM_144629|RFTN2|130132|raftlin family member 2##BC111069|RFTN2|130132|raftlin family member 2##NM_001204094|MOB4|25843|MOB family member 4, phocein##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1	0.535983	CTCF.p2:-7:0.536
chr14	24135229	24135341	reg1017940.p1	7.952	+	AK222857 NM_005794 NM_182908 AK309945 BC002786 U31875	-29707	+	BC055429 TSC_hg19_v1_chr14_-_24048004 AB058734 NM_001146028 NM_032452	-87285	-	TSC_hg19_v1_chr14_-_24047779 AK091572 AX747068	-87487	-	TSC_hg19_v1_chr14_-_24422882 BX247982	287591	-	TSC_hg19_v1_chr14_+_24422978 AY616182 DQ344810 NM_021004 AY358638 AF064256 AF044127 AK001870 AK308436 DQ325464 AK314448 AY071856 BC003019 AK301201 DQ338571	287742	+	BC062348 BC080582 TSC_hg19_v1_chr14_-_24423358 BX647964	288066	-	AK222857|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##NM_005794|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##NM_182908|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##AK309945|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##BC002786|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##U31875|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##BC055429|JPH4|84502|junctophilin 4##AB058734|JPH4|84502|junctophilin 4##NM_001146028|JPH4|84502|junctophilin 4##NM_032452|JPH4|84502|junctophilin 4##AK091572|JPH4|84502|junctophilin 4##BX247982|C14orf167|55449|chromosome 14 open reading frame 167##AY616182|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ344810|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##NM_021004|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY358638|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF064256|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF044127|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK001870|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK308436|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ325464|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK314448|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY071856|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##BC003019|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ338571|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##BC062348|C14orf167|55449|chromosome 14 open reading frame 167##BC080582|C14orf167|55449|chromosome 14 open reading frame 167##BX647964|C14orf167|55449|chromosome 14 open reading frame 167	0.996896	CTCF.p2:4:0.997
chr19	532945	533053	reg1018291.p1	7.952	+	TSC_hg19_v1_chr19_+_531759 L22005 BC023979 AB590273 DQ890738 DQ893910 DQ894652 CU676208 BT006659	-1165	+	TSC_hg19_v1_chr19_+_531720 BC018143 AK291554 BC009850 NM_004359	-1288	+	TSC_hg19_v1_chr19_+_507499 AK126170 NM_033513 AK125401 AB463513 BC009520	-25457	+	NM_005317 BC025701 HQ257986 AB590860 L23134	11049	+	TSC_hg19_v1_chr19_+_571321 GU557064 GU557065 NM_198591	38328	+	TSC_hg19_v1_chr19_+_572564 NM_001728 NM_198589 AK302231	39486	+	L22005|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##BC023979|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##DQ890738|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##DQ893910|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##DQ894652|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##BT006659|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##BC018143|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##AK291554|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##BC009850|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##NM_004359|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##AK126170|TPGS1|91978|tubulin polyglutamylase complex subunit 1##NM_033513|TPGS1|91978|tubulin polyglutamylase complex subunit 1##BC009520|TPGS1|91978|tubulin polyglutamylase complex subunit 1##NM_005317|GZMM|3004|granzyme M (lymphocyte met-ase 1)##BC025701|GZMM|3004|granzyme M (lymphocyte met-ase 1)##HQ257986|GZMM|3004|granzyme M (lymphocyte met-ase 1)##L23134|GZMM|3004|granzyme M (lymphocyte met-ase 1)##GU557064|BSG|682|basigin (Ok blood group)##GU557065|BSG|682|basigin (Ok blood group)##NM_198591|BSG|682|basigin (Ok blood group)##NM_001728|BSG|682|basigin (Ok blood group)##NM_198589|BSG|682|basigin (Ok blood group)##AK302231|BSG|682|basigin (Ok blood group)	0.959406	CTCF.p2:-7:0.959
chr1	217834248	217834377	reg1015442.p2	7.951	+	AY963797 AK310291 AK098591 BC014608 NM_138796 TSC_hg19_v1_chr1_+_217804714 EU832110 EU832204	-29619	+	AB527654 CU687736 BC042193 TSC_hg19_v1_chr1_-_217804402 BC063474 AK001114 AK291238 NM_018040 BC027719	-29930	-	CR749497 BX647076 NM_001134285	-523217	-	NM_016052 TSC_hg19_v1_chr1_+_218458635	624320	+	AK290066 BC003668 TSC_hg19_v1_chr1_+_218458652 BC020641 AF151873	624357	+	NM_001135599 NM_003238 TSC_hg19_v1_chr1_+_218518677 AB209842	684399	+	AY963797|SPATA17|128153|spermatogenesis associated 17##AK310291|SPATA17|128153|spermatogenesis associated 17##AK098591|SPATA17|128153|spermatogenesis associated 17##BC014608|SPATA17|128153|spermatogenesis associated 17##NM_138796|SPATA17|128153|spermatogenesis associated 17##EU832110|SPATA17|128153|spermatogenesis associated 17##EU832204|SPATA17|128153|spermatogenesis associated 17##BC042193|GPATCH2|55105|G patch domain containing 2##BC063474|GPATCH2|55105|G patch domain containing 2##AK001114|GPATCH2|55105|G patch domain containing 2##AK291238|GPATCH2|55105|G patch domain containing 2##NM_018040|GPATCH2|55105|G patch domain containing 2##BC027719|GPATCH2|55105|G patch domain containing 2##CR749497|ESRRG|2104|estrogen-related receptor gamma##BX647076|ESRRG|2104|estrogen-related receptor gamma##NM_001134285|ESRRG|2104|estrogen-related receptor gamma##NM_016052|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AK290066|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC003668|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC020641|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AF151873|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##NM_001135599|TGFB2|7042|transforming growth factor, beta 2##NM_003238|TGFB2|7042|transforming growth factor, beta 2##AB209842|TGFB2|7042|transforming growth factor, beta 2	0.034583	
chr9	88649926	88650055	reg1017446.p1	7.951	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	-93812	+	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	-93916	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	-293119	-	TSC_hg19_v1_chr9_-_88714445 AY358593 BC001740 AK075542 AF236056	64435	-	TSC_hg19_v1_chr9_-_88714474 AK027717	64481	-	TSC_hg19_v1_chr9_-_88714486 NM_016548	64516	-	BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AY358593|GOLM1|51280|golgi membrane protein 1##BC001740|GOLM1|51280|golgi membrane protein 1##AK075542|GOLM1|51280|golgi membrane protein 1##AF236056|GOLM1|51280|golgi membrane protein 1##AK027717|GOLM1|51280|golgi membrane protein 1##NM_016548|GOLM1|51280|golgi membrane protein 1	0.798303	CTCF.p2:-1:0.798
chr19	1837746	1837876	reg1018759.p1	7.950	+	AY302538 NM_001178002 TSC_hg19_v1_chr19_-_1812276 BC035162 NM_138813 AK125225 AK125969	-25574	-	TSC_hg19_v1_chr19_+_1776120 AK074606	-61624	+	NM_001080488 TSC_hg19_v1_chr19_+_1753823	-84059	+	AB384122 TSC_hg19_v1_chr19_-_1848439 AB032964 BC016923	10590	-	TSC_hg19_v1_chr19_-_1848471 BC032244 NM_020695	10650	-	TSC_hg19_v1_chr19_-_1863441 AF327440	25649	-	AY302538|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001178002|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##BC035162|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_138813|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125225|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125969|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001080488|ONECUT3|390874|one cut homeobox 3##AB032964|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC016923|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC032244|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##NM_020695|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##AF327440|KLF16|83855|Kruppel-like factor 16	0.981798	CTCF.p2:-18:0.982
chr19	49601172	49601318	reg1017427.p1	7.950	+	TSC_hg19_v1_chr19_+_49588833 X06813	-12412	+	TSC_hg19_v1_chr19_+_49588717 BC001315 M22636 X06815	-12498	+	TSC_hg19_v1_chr19_+_49588707 X06817 AK096783	-12549	+	TSC_hg19_v1_chr19_+_49607925 X06814	6701	+	TSC_hg19_v1_chr19_+_49617626 AY358744 NM_022165	16373	+	TSC_hg19_v1_chr19_+_49617635 BC027618 AF311862 AB528696	16400	+	X06813|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##BC001315|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##M22636|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##X06815|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##X06817|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##AK096783|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##X06814|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##AY358744|LIN7B|64130|lin-7 homolog B (C. elegans)##NM_022165|LIN7B|64130|lin-7 homolog B (C. elegans)##BC027618|LIN7B|64130|lin-7 homolog B (C. elegans)##AF311862|LIN7B|64130|lin-7 homolog B (C. elegans)	0.999302	CTCF.p2:7:0.999
chr5	71053876	71053995	reg1015629.p1	7.950	+	NM_004291 BC029882 U16826 CR542216 CU688778 EU831800 EU831877	-38881	+	TSC_hg19_v1_chr5_+_70944968 AK025591	-108948	+	AF261884 TSC_hg19_v1_chr5_+_70883182 BC065027 CU688004	-170720	+	TSC_hg19_v1_chr5_+_71403301 BC017240 NM_005909 BC025240 BC139918 BC150196 BC046114 AK096273 AK308147 BX647077 BC039822 BC108733 BC032516 BC073993 BC056145 BC063669 BC094834 AB463119	349344	+	TSC_hg19_v1_chr5_+_71502701 AK125194	448828	+	CU687962 D87453 TSC_hg19_v1_chr5_-_71616067 BC064902 BC011818 AK299412 AK025417 AK309065	562123	-	NM_004291|CARTPT|9607|CART prepropeptide##BC029882|CARTPT|9607|CART prepropeptide##U16826|CARTPT|9607|CART prepropeptide##CR542216|CARTPT|9607|CART prepropeptide##EU831800|CARTPT|9607|CART prepropeptide##EU831877|CARTPT|9607|CART prepropeptide##AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AF261884|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##BC065027|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##BC017240|MAP1B|4131|microtubule-associated protein 1B##NM_005909|MAP1B|4131|microtubule-associated protein 1B##BC025240|MAP1B|4131|microtubule-associated protein 1B##BC139918|MAP1B|4131|microtubule-associated protein 1B##BC150196|MAP1B|4131|microtubule-associated protein 1B##BC046114|MAP1B|4131|microtubule-associated protein 1B##AK096273|MAP1B|4131|microtubule-associated protein 1B##AK308147|MAP1B|4131|microtubule-associated protein 1B##BX647077|MAP1B|4131|microtubule-associated protein 1B##BC039822|MAP1B|4131|microtubule-associated protein 1B##BC108733|MAP1B|4131|microtubule-associated protein 1B##BC032516|MAP1B|4131|microtubule-associated protein 1B##BC073993|MAP1B|4131|microtubule-associated protein 1B##BC056145|MAP1B|4131|microtubule-associated protein 1B##BC063669|MAP1B|4131|microtubule-associated protein 1B##BC094834|MAP1B|4131|microtubule-associated protein 1B##AK125194|MAP1B|4131|microtubule-associated protein 1B##D87453|MRPS27|23107|mitochondrial ribosomal protein S27##BC064902|MRPS27|23107|mitochondrial ribosomal protein S27##BC011818|MRPS27|23107|mitochondrial ribosomal protein S27##AK299412|MRPS27|23107|mitochondrial ribosomal protein S27##AK025417|MRPS27|23107|mitochondrial ribosomal protein S27##AK309065|MRPS27|23107|mitochondrial ribosomal protein S27	0.359236	CTCF.p2:20:0.359
chr8	121358100	121358225	reg1017130.p1	7.950	+	TSC_hg19_v1_chr8_+_121137341 NM_021110 Y11709 AK293080 AK307716 AK311498	-220807	+	NM_022783 TSC_hg19_v1_chr8_+_120885965 AK315175 AK225168 AK297822 AL136678 AK225675 BC024746 AK022490 BC012040 AM392576 AM393333 AB527130 AK023916	-472158	+	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	-490048	-	CU692406 DQ893117 DQ893487 DQ896395 AK307322 TSC_hg19_v1_chr8_-_121457370 AB049640 AF112214 BC009190	99193	-	TSC_hg19_v1_chr8_-_121457391 AK311924	99231	-	BC021744 NM_014078	99473	-	NM_021110|COL14A1|7373|collagen, type XIV, alpha 1##Y11709|COL14A1|7373|collagen, type XIV, alpha 1##AK293080|COL14A1|7373|collagen, type XIV, alpha 1##AK307716|COL14A1|7373|collagen, type XIV, alpha 1##AK311498|COL14A1|7373|collagen, type XIV, alpha 1##NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ893117|MRPL13|28998|mitochondrial ribosomal protein L13##DQ893487|MRPL13|28998|mitochondrial ribosomal protein L13##DQ896395|MRPL13|28998|mitochondrial ribosomal protein L13##AK307322|MRPL13|28998|mitochondrial ribosomal protein L13##AB049640|MRPL13|28998|mitochondrial ribosomal protein L13##AF112214|MRPL13|28998|mitochondrial ribosomal protein L13##BC009190|MRPL13|28998|mitochondrial ribosomal protein L13##AK311924|MRPL13|28998|mitochondrial ribosomal protein L13##BC021744|MRPL13|28998|mitochondrial ribosomal protein L13##NM_014078|MRPL13|28998|mitochondrial ribosomal protein L13	0.0	
chr8	22094919	22095060	reg1018315.p1	7.950	+	NM_001099335 NM_014759	-5139	-	TSC_hg19_v1_chr8_-_22089573 D87463 AK294372 BC034034 BC035940 AK098743	-5404	-	TSC_hg19_v1_chr8_+_22022887 M22488 Y08723 Y08724 Y08725 AB527418 U50330	-72090	+	NM_001722 TSC_hg19_v1_chr8_+_22102643	7641	+	TSC_hg19_v1_chr8_+_22102645 M17754	7661	+	TSC_hg19_v1_chr8_+_22102905 BC000516 BC003039 BC004484 AK295725 BC002603 CU678738 AF346574 AY092086 CR536509 CR541803	7914	+	NM_001099335|PHYHIP|9796|phytanoyl-CoA 2-hydroxylase interacting protein##NM_014759|PHYHIP|9796|phytanoyl-CoA 2-hydroxylase interacting protein##D87463|PHYHIP|9796|phytanoyl-CoA 2-hydroxylase interacting protein##AK294372|PHYHIP|9796|phytanoyl-CoA 2-hydroxylase interacting protein##BC034034|PHYHIP|9796|phytanoyl-CoA 2-hydroxylase interacting protein##BC035940|PHYHIP|9796|phytanoyl-CoA 2-hydroxylase interacting protein##AK098743|PHYHIP|9796|phytanoyl-CoA 2-hydroxylase interacting protein##M22488|BMP1|649|bone morphogenetic protein 1##Y08723|BMP1|649|bone morphogenetic protein 1##Y08724|BMP1|649|bone morphogenetic protein 1##Y08725|BMP1|649|bone morphogenetic protein 1##U50330|BMP1|649|bone morphogenetic protein 1##NM_001722|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##M17754|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##BC000516|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##BC003039|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##BC004484|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##AK295725|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##BC002603|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##AF346574|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##AY092086|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##CR536509|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa##CR541803|POLR3D|661|polymerase (RNA) III (DNA directed) polypeptide D, 44kDa	0.696526	CTCF.p2:-20:0.697
chr10	120899105	120899222	reg1016447.p1	7.949	+	TSC_hg19_v1_chr10_+_120863628 AF168713 AK000031 AK297633 AK297971 AK293136 BC022271 CU687018 CU692524	-35523	+	NM_207009 TSC_hg19_v1_chr10_+_120863621	-35546	+	TSC_hg19_v1_chr10_+_120863593 AK293365	-35583	+	CU687762 AY269785 TSC_hg19_v1_chr10_-_120925213 AK095295 BC063562 BC050475 NM_213649	26024	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	39140	-	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	39184	-	AF168713|FAM45A|404636|family with sequence similarity 45, member A##AK000031|FAM45A|404636|family with sequence similarity 45, member A##AK297633|FAM45A|404636|family with sequence similarity 45, member A##AK297971|FAM45B|55855|family with sequence similarity 45, member A pseudogene##AK293136|FAM45A|404636|family with sequence similarity 45, member A##BC022271|FAM45A|404636|family with sequence similarity 45, member A##NM_207009|FAM45A|404636|family with sequence similarity 45, member A##AK293365|FAM45A|404636|family with sequence similarity 45, member A##AY269785|SFXN4|119559|sideroflexin 4##AK095295|SFXN4|119559|sideroflexin 4##BC063562|SFXN4|119559|sideroflexin 4##BC050475|SFXN4|119559|sideroflexin 4##NM_213649|SFXN4|119559|sideroflexin 4##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3	0.172413	
chr16	16281350	16281473	reg1015824.p1	7.949	+	TSC_hg19_v1_chr16_+_16146613 HQ917065	-134793	+	TSC_hg19_v1_chr16_+_16043442 L05628 NM_004996 NM_019862 NM_019898 NM_019899 NM_019900 X78338	-238047	+	AL832498 TSC_hg19_v1_chr16_-_15982471	-298926	-	AF168791 AM711638 AM774324 BC050733 AF076622 BC131732 U66689 NM_001079528 NM_001171 AY078405 AK298295	35909	-	TSC_hg19_v1_chr16_+_16326401 NM_001004067	44986	+	TSC_hg19_v1_chr16_+_16326457 AL832855	45044	+	L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##AL832498|FOPNL|123811|FGFR1OP N-terminal like##AF168791|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM711638|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM774324|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC050733|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AF076622|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC131732|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001079528|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001171|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AY078405|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AK298295|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001004067|NOMO3|408050|NODAL modulator 3##AL832855|NOMO2|283820|NODAL modulator 2	0.988367	CTCF.p2:-11:0.988
chr5	146568505	146568624	reg1016827.p1	7.949	+	AK294659 NM_181677 NM_181678 AK295347	-107542	-	BC031790 NM_181674 NM_181676	-132920	-	AK314810 M64930 NM_004576 AK056192 NM_181675 AK289717 BX647887 NM_001127381	-310265	-	AK094580 NM_001112724 NM_145001 TSC_hg19_v1_chr5_+_146614587 AK315942 BC021666 AK299099	46042	+	CU691634 AB384367 EU832180 EU832273 TSC_hg19_v1_chr5_-_146833229 BC039006 D78014 AK297223 NM_001387 Y07818	264701	-	EU007906 CU687310 EU832163 EU832257 TSC_hg19_v1_chr5_-_146889506	320902	-	AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK314810|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##M64930|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_004576|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK056192|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181675|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK289717|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BX647887|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_001127381|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK094580|STK32A|202374|serine/threonine kinase 32A##NM_001112724|STK32A|202374|serine/threonine kinase 32A##NM_145001|STK32A|202374|serine/threonine kinase 32A##AK315942|STK32A|202374|serine/threonine kinase 32A##BC021666|STK32A|202374|serine/threonine kinase 32A##AK299099|STK32A|202374|serine/threonine kinase 32A##EU832180|DPYSL3|1809|dihydropyrimidinase-like 3##EU832273|DPYSL3|1809|dihydropyrimidinase-like 3##BC039006|DPYSL3|1809|dihydropyrimidinase-like 3##D78014|DPYSL3|1809|dihydropyrimidinase-like 3##AK297223|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3##Y07818|DPYSL3|1809|dihydropyrimidinase-like 3##EU007906|DPYSL3|1809|dihydropyrimidinase-like 3##EU832163|DPYSL3|1809|dihydropyrimidinase-like 3##EU832257|DPYSL3|1809|dihydropyrimidinase-like 3	0.999333	CTCF.p2:10:0.999
chr7	47475539	47475648	reg1015724.p1	7.949	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-1514787	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-1542459	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-1547488	+	TSC_hg19_v1_chr7_-_47579207 BC071791	103616	-	TSC_hg19_v1_chr7_-_47621681 CR749644	146070	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	146190	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.014491	
chr8	98748699	98748801	reg1016602.p1	7.949	+	AK308030 TSC_hg19_v1_chr8_+_98703378	-45372	+	BC022825 TSC_hg19_v1_chr8_+_98656510 BC009324 AF411226 AY082966 AY974040	-92137	+	TSC_hg19_v1_chr8_+_98656437 BC014977 AF501310	-92291	+	AY057051 AY261384 NM_018407 AF527412 TSC_hg19_v1_chr8_+_98787993	39151	+	TSC_hg19_v1_chr8_+_98788065 BC031021 AK075326 BC014129 AL136942 AK311377 AX810698 AB528832 AF317417 AM392726 AM393691	39375	+	TSC_hg19_v1_chr8_+_98881340 NM_002380 NM_030583 BC010444 AY358895 AK075489 AL833931 AL137638	132579	+	AK308030|MTDH|92140|metadherin##BC022825|MTDH|92140|metadherin##BC009324|MTDH|92140|metadherin##AF411226|MTDH|92140|metadherin##AY082966|MTDH|92140|metadherin##AY974040|MTDH|92140|metadherin##BC014977|MTDH|92140|metadherin##AF501310|MTDH|92140|metadherin##AY057051|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AY261384|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##NM_018407|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF527412|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##BC031021|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK075326|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##BC014129|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AL136942|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK311377|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF317417|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AM392726|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AM393691|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##NM_002380|MATN2|4147|matrilin 2##NM_030583|MATN2|4147|matrilin 2##BC010444|MATN2|4147|matrilin 2##AY358895|MATN2|4147|matrilin 2##AK075489|MATN2|4147|matrilin 2##AL833931|MATN2|4147|matrilin 2##AL137638|MATN2|4147|matrilin 2	0.786879	CTCF.p2:-28:0.787
chrX	53019331	53019461	reg1017111.p1	7.949	+	AK091598 AX747084 BX649013 CR749619 TSC_hg19_v1_chrX_-_52987693 AK057692 NM_001242491	-31734	-	AL834135 NM_001099684	-33768	-	AL834135 NM_001099684	-90988	+	BC067819 NM_001242489 NM_001242490 NM_001242492 NM_001242493 NM_001242494 NM_001242495 NM_001242496 NM_001242497 NM_014138	5250	-	BC009861 NM_018969	59109	+	TSC_hg19_v1_chrX_+_53111548 NM_022117 AK131220 AK292462 AY040871 AF273046 BC024270 AL713652 AB463325 AM392716 AF254794	92246	+	AK091598|FAM156B|727866|family with sequence similarity 156, member B##BX649013|FAM156B|727866|family with sequence similarity 156, member B##CR749619|FAM156A|29057|family with sequence similarity 156, member A##AK057692|FAM156A|29057|family with sequence similarity 156, member A##NM_001242491|FAM156A|29057|family with sequence similarity 156, member A##AL834135|FAM156A|29057|family with sequence similarity 156, member A##NM_001099684|FAM156B|727866|family with sequence similarity 156, member B##AL834135|FAM156A|29057|family with sequence similarity 156, member A##NM_001099684|FAM156B|727866|family with sequence similarity 156, member B##BC067819|FAM156A|29057|family with sequence similarity 156, member A##NM_001242489|FAM156A|29057|family with sequence similarity 156, member A##NM_001242490|FAM156A|29057|family with sequence similarity 156, member A##NM_001242492|FAM156A|29057|family with sequence similarity 156, member A##NM_001242493|FAM156A|29057|family with sequence similarity 156, member A##NM_001242494|FAM156A|29057|family with sequence similarity 156, member A##NM_001242495|FAM156A|29057|family with sequence similarity 156, member A##NM_001242496|FAM156A|29057|family with sequence similarity 156, member A##NM_001242497|FAM156A|29057|family with sequence similarity 156, member A##NM_014138|FAM156A|29057|family with sequence similarity 156, member A##BC009861|GPR173|54328|G protein-coupled receptor 173##NM_018969|GPR173|54328|G protein-coupled receptor 173##NM_022117|TSPYL2|64061|TSPY-like 2##AK131220|TSPYL2|64061|TSPY-like 2##AK292462|TSPYL2|64061|TSPY-like 2##AY040871|TSPYL2|64061|TSPY-like 2##AF273046|TSPYL2|64061|TSPY-like 2##BC024270|TSPYL2|64061|TSPY-like 2##AL713652|TSPYL2|64061|TSPY-like 2##AM392716|TSPYL2|64061|TSPY-like 2##AF254794|TSPYL2|64061|TSPY-like 2	0.972663	CTCF.p2:-3:0.973
chr10	17292893	17292992	reg1016471.p1	7.948	+	TSC_hg19_v1_chr10_-_17271978 BC078172	-20956	-	TSC_hg19_v1_chr10_+_17271962 AK093924	-20963	+	TSC_hg19_v1_chr10_+_17271887 M25246	-21054	+	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	203272	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	203423	-	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	366431	-	AK093924|VIM|7431|vimentin##M25246|VIM|7431|vimentin##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A	0.528537	CTCF.p2:9:0.529
chr1	160847109	160847229	reg1017137.p1	7.948	+	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	-14591	-	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	-81171	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-138105	+	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	7789	-	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	77390	-	BT020103 CR533512 DQ892228 DQ895428 EU831648 EU831732 AB528601 AF207907 AK304412 TSC_hg19_v1_chr1_-_160990931 BC001533 AY358896 AK026665 AF154005 AK075152 AL136649	143729	-	AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2##BT020103|F11R|50848|F11 receptor##CR533512|F11R|50848|F11 receptor##DQ892228|F11R|50848|F11 receptor##DQ895428|F11R|50848|F11 receptor##EU831648|F11R|50848|F11 receptor##EU831732|F11R|50848|F11 receptor##AF207907|F11R|50848|F11 receptor##AK304412|F11R|50848|F11 receptor##BC001533|F11R|50848|F11 receptor##AY358896|F11R|50848|F11 receptor##AK026665|F11R|50848|F11 receptor##AF154005|F11R|50848|F11 receptor##AK075152|F11R|50848|F11 receptor##AL136649|F11R|50848|F11 receptor	0.649816	CTCF.p2:-5:0.650
chr5	115367917	115368068	reg1017857.p1	7.948	+	AK291655 BC068560 NM_173800 BC060869 AY560010 BC109022 BC109023	-69781	+	TSC_hg19_v1_chr5_+_115177642 NM_001284 BX647735 U91932 BC000804 D63643 BC012614 X99458 DQ891198 DQ894381 AK311843 BT009833 CR450341	-190317	+	BC011033 TSC_hg19_v1_chr5_-_115177263 AB017507 AB590693 EU554057 BC012266 AK313320 NM_004707	-190588	-	NM_001195581	19170	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	52729	+	TSC_hg19_v1_chr5_+_115898220 D28352	530232	+	AK291655|AQPEP|206338|laeverin##BC068560|AQPEP|206338|laeverin##NM_173800|AQPEP|206338|laeverin##BC060869|AQPEP|206338|laeverin##AY560010|AQPEP|206338|laeverin##BC109022|AQPEP|206338|laeverin##BC109023|AQPEP|206338|laeverin##NM_001284|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BX647735|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##U91932|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC000804|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##D63643|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC012614|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##X99458|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ891198|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ894381|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##AK311843|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BT009833|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##CR450341|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC011033|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##AB017507|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##EU554057|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##BC012266|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##AK313320|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##NM_004707|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##NM_001195581|LOC644100|644100|uncharacterized LOC644100##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10	0.318879	CTCF.p2:32:0.319
chr5	89682061	89682175	reg1016423.p1	7.948	+	AL833268 AL833274 NM_001131005 NM_001193347	-1482224	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1496854	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-1496998	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	23421	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	88064	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	88460	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.604814	CTCF.p2:7:0.605
chr4	183727603	183727747	reg1016328.p1	7.947	+	NM_001080477 HE578284 HE578285	-482521	+	TSC_hg19_v1_chr4_+_183065111 AK308489	-662550	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-5364032	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	110855	-	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	110959	-	TSC_hg19_v1_chr4_+_184020431 NM_024949	292803	+	NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##NM_024949|WWC2|80014|WW and C2 domain containing 2	0.941891	CTCF.p2:12:0.942
chr6	138272316	138272426	reg1013804.p1	7.947	+	TSC_hg19_v1_chr6_-_138189314 AK124173	-83021	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-83834	+	BC051352 AK096362 NM_175747	-456846	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	156197	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	210765	+	BC069109 NM_021635 AF189269 AF189270	267255	-	AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1	0.552483	CTCF.p2:-5:0.552
chr12	102694982	102695115	reg1018740.p1	7.946	+	DQ892335 DQ895540 M57703 BC018048 NM_002674	-103468	-	NM_017915 AK302724 AK300041 BC070270 AF274940 BC030962 BC018903 AK303571 AK000648 BC014313	-180990	+	TSC_hg19_v1_chr12_-_102513850 AK296733 AK310619	-181170	-	TSC_hg19_v1_chr12_-_102872329 M37484 NM_001111284	177330	-	AB384874 BC148266 CR541861 X56773 X56774 M29644 X00173 TSC_hg19_v1_chr12_-_102874271	179167	-	TSC_hg19_v1_chr12_-_102874302 BC152321 M27544	179254	-	DQ892335|PMCH|5367|pro-melanin-concentrating hormone##DQ895540|PMCH|5367|pro-melanin-concentrating hormone##M57703|PMCH|5367|pro-melanin-concentrating hormone##BC018048|PMCH|5367|pro-melanin-concentrating hormone##NM_002674|PMCH|5367|pro-melanin-concentrating hormone##NM_017915|C12orf48|55010|chromosome 12 open reading frame 48##AK302724|C12orf48|55010|chromosome 12 open reading frame 48##AK300041|C12orf48|55010|chromosome 12 open reading frame 48##BC070270|C12orf48|55010|chromosome 12 open reading frame 48##AF274940|C12orf48|55010|chromosome 12 open reading frame 48##BC030962|C12orf48|55010|chromosome 12 open reading frame 48##BC018903|C12orf48|55010|chromosome 12 open reading frame 48##AK303571|C12orf48|55010|chromosome 12 open reading frame 48##AK000648|C12orf48|55010|chromosome 12 open reading frame 48##BC014313|C12orf48|55010|chromosome 12 open reading frame 48##AK296733|NUP37|79023|nucleoporin 37kDa##AK310619|NUP37|79023|nucleoporin 37kDa##M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	0.761975	CTCF.p2:4:0.762
chr1	220392156	220392275	reg1015441.p1	7.946	+	TSC_hg19_v1_chr1_+_220267495 AY952883 D28500 AK291432 BC040376	-124609	+	TSC_hg19_v1_chr1_+_220267461 AY267462 NM_018060 BC137438	-124763	+	AJ249339 TSC_hg19_v1_chr1_-_220263167 AK315962 NM_006085	-129041	-	AB020646 BC146760 TSC_hg19_v1_chr1_-_220445745 BC050630 AF004828 BC131573	53497	-	TSC_hg19_v1_chr1_-_220445773 AF255648 AK021928 BC098383	53550	-	TSC_hg19_v1_chr1_-_220445786 AK291234	53575	-	AY952883|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##D28500|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##AK291432|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##BC040376|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##AJ249339|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AK315962|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##NM_006085|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AB020646|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC146760|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC050630|AURKAPS1|6791|aurora kinase A pseudogene 1##AF004828|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC131573|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AF255648|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AK021928|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC098383|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AK291234|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)	0.0	
chr12	107130284	107130388	reg1017537.p1	7.945	+	BC028582 NM_032491 AF332192 AK315698 BC030644 CU688514 CU688962 DQ890831 DQ893986	-51803	+	NM_001206691 AB095365 AK302837 AB044245	-135405	+	AB095366 NM_213594 TSC_hg19_v1_chr12_+_106976698 AK291445	-153645	+	TSC_hg19_v1_chr12_+_107168357 NM_018157 BC132689 BC144056 BC034220 AK001482 AY221116	38126	+	TSC_hg19_v1_chr12_+_107349591 NM_152261	219261	+	AK024021 TSC_hg19_v1_chr12_+_107349684 AK001731 BC020522 AK022770	219372	+	BC028582|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_032491|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AF332192|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK315698|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##BC030644|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ890831|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ893986|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_001206691|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095365|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK302837|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB044245|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095366|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_213594|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK291445|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_018157|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC132689|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC144056|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC034220|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AK001482|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AY221116|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##NM_152261|C12orf23|90488|chromosome 12 open reading frame 23##AK024021|C12orf23|90488|chromosome 12 open reading frame 23##AK001731|C12orf23|90488|chromosome 12 open reading frame 23##BC020522|C12orf23|90488|chromosome 12 open reading frame 23##AK022770|C12orf23|90488|chromosome 12 open reading frame 23	0.98354	CTCF.p2:-2:0.970
chr2	71327725	71327844	reg1017490.p1	7.945	+	TSC_hg19_v1_chr2_+_71295777 BC001029 BC005371 AK001812 AK097223 AK222645 BC036843 AJ242910 AB463914 CU674506 CU675147 DQ892674 DQ895916 CR457271	-32035	+	TSC_hg19_v1_chr2_+_71295436 AK297224	-32342	+	NM_017567 TSC_hg19_v1_chr2_+_71295427	-32367	+	DQ891375 DQ894553 TSC_hg19_v1_chr2_-_71357360 BC020825 AF364547 NM_032601	29595	-	TSC_hg19_v1_chr2_+_71357454 AK056862 NM_005791 BC126389	29705	+	TSC_hg19_v1_chr2_+_71357768 AK310931 BC041084 X98494	30001	+	BC001029|NAGK|55577|N-acetylglucosamine kinase##BC005371|NAGK|55577|N-acetylglucosamine kinase##AK001812|NAGK|55577|N-acetylglucosamine kinase##AK097223|NAGK|55577|N-acetylglucosamine kinase##AK222645|NAGK|55577|N-acetylglucosamine kinase##BC036843|NAGK|55577|N-acetylglucosamine kinase##AJ242910|NAGK|55577|N-acetylglucosamine kinase##DQ892674|NAGK|55577|N-acetylglucosamine kinase##DQ895916|NAGK|55577|N-acetylglucosamine kinase##CR457271|NAGK|55577|N-acetylglucosamine kinase##AK297224|NAGK|55577|N-acetylglucosamine kinase##NM_017567|NAGK|55577|N-acetylglucosamine kinase##DQ891375|MCEE|84693|methylmalonyl CoA epimerase##DQ894553|MCEE|84693|methylmalonyl CoA epimerase##BC020825|MCEE|84693|methylmalonyl CoA epimerase##AF364547|MCEE|84693|methylmalonyl CoA epimerase##NM_032601|MCEE|84693|methylmalonyl CoA epimerase##AK056862|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##NM_005791|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC126389|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##AK310931|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC041084|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##X98494|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	0.800256	CTCF.p2:-3:0.800
chr1	167370641	167370766	reg1018310.p1	7.944	+	TSC_hg19_v1_chr1_+_167298389 AY113189 BC001664 BC003571	-72264	+	NM_001198783 TSC_hg19_v1_chr1_+_167298306	-72405	+	TSC_hg19_v1_chr1_+_167190127 NM_001198786 NM_002697 AK302525 AK303201 AK308004 AK091438 S66901 BC052274 X13403	-180646	+	AB590419 CU693020 DQ893778 EU176191 X55510 X55511 X55512 BC025703 AK128376 AK313946 J04132 AK223325 NM_000734 NM_198053	117070	-	DQ891131 DQ894310 AB463481 AY359071 BC006786 BC008628 TSC_hg19_v1_chr1_-_167523000 AK130006 AK315497 AK075375 AK095456 AF084523	152288	-	TSC_hg19_v1_chr1_-_167523043 NM_003851	152360	-	AY113189|POU2F1|5451|POU class 2 homeobox 1##BC001664|POU2F1|5451|POU class 2 homeobox 1##BC003571|POU2F1|5451|POU class 2 homeobox 1##NM_001198783|POU2F1|5451|POU class 2 homeobox 1##NM_001198786|POU2F1|5451|POU class 2 homeobox 1##NM_002697|POU2F1|5451|POU class 2 homeobox 1##AK302525|POU2F1|5451|POU class 2 homeobox 1##AK303201|POU2F1|5451|POU class 2 homeobox 1##AK308004|POU2F1|5451|POU class 2 homeobox 1##AK091438|POU2F1|5451|POU class 2 homeobox 1##BC052274|POU2F1|5451|POU class 2 homeobox 1##X13403|POU2F1|5451|POU class 2 homeobox 1##DQ893778|CD247|919|CD247 molecule##EU176191|CD247|919|CD247 molecule##X55510|CD247|919|CD247 molecule##X55511|CD247|919|CD247 molecule##X55512|CD247|919|CD247 molecule##BC025703|CD247|919|CD247 molecule##AK128376|CD247|919|CD247 molecule##AK313946|CD247|919|CD247 molecule##J04132|CD247|919|CD247 molecule##AK223325|CD247|919|CD247 molecule##NM_000734|CD247|919|CD247 molecule##NM_198053|CD247|919|CD247 molecule##DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1##NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1	0.919021	CTCF.p2:-16:0.919
chr12	99780850	99780984	reg1017777.p2	7.944	+	AK294191 NM_001204067	-232050	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	-232360	-	AY356353 AK315954 AM980945 AK294994 TSC_hg19_v1_chr12_-_99288638 AK295988 NM_001204065 NM_001204079 NM_001204080 NM_001204081	-492330	-	NM_153364 AK312767 BC031221	260613	+	NM_152788	597514	-	BC127017 AK125813 TSC_hg19_v1_chr12_-_100536637 BC014891	755632	-	AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_153364|FAM71C|196472|family with sequence similarity 71, member C##AK312767|FAM71C|196472|family with sequence similarity 71, member C##BC031221|FAM71C|196472|family with sequence similarity 71, member C##NM_152788|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC127017|UHRF1BP1L|23074|UHRF1 binding protein 1-like##AK125813|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC014891|UHRF1BP1L|23074|UHRF1 binding protein 1-like	0.0	
chr7	150941506	150941638	reg1020280.p1	7.944	+	AL137426 BC015321 TSC_hg19_v1_chr7_-_150930365	-11240	-	TSC_hg19_v1_chr7_+_150929584 AK056331 AB037823 AB095812 NM_019015 BC052944	-11982	+	TSC_hg19_v1_chr7_-_150924279 BC001661 AF261092 AF261091 NM_005692 NM_007189	-17297	-	TSC_hg19_v1_chr7_-_150945710 AK316173	4138	-	AK309500 TSC_hg19_v1_chr7_-_150945768 NM_001003801 AK297876	4186	-	TSC_hg19_v1_chr7_-_150946031 AY450430	4469	-	AK056331|CHPF2|54480|chondroitin polymerizing factor 2##AB037823|CHPF2|54480|chondroitin polymerizing factor 2##AB095812|CHPF2|54480|chondroitin polymerizing factor 2##NM_019015|CHPF2|54480|chondroitin polymerizing factor 2##BC052944|CHPF2|54480|chondroitin polymerizing factor 2##BC001661|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2##AF261092|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2##AF261091|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2##NM_005692|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2##NM_007189|ABCF2|10061|ATP-binding cassette, sub-family F (GCN20), member 2##AK316173|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##AK309500|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_001003801|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##AK297876|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##AY450430|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3	0.251121	CTCF.p2:2:0.251
chr12	82910932	82911086	reg1020342.p1	7.943	+	NM_032230 TSC_hg19_v1_chr12_+_82752307 AK310231 AK026442 BC029120 CU688600	-158700	+	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	-158833	-	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	-757900	-	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	169691	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	169908	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	170252	+	NM_032230|C12orf26|84190|chromosome 12 open reading frame 26##AK310231|C12orf26|84190|chromosome 12 open reading frame 26##AK026442|C12orf26|84190|chromosome 12 open reading frame 26##BC029120|C12orf26|84190|chromosome 12 open reading frame 26##BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59##AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2	0.01785	
chr15	51575385	51575519	reg1019727.p1	7.943	+	AY517501 NM_207381	-177980	-	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	-188602	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	-374525	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	55312	-	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	58342	+	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	339521	-	AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2	0.391692	CTCF.p2:5:0.392
chr1	18544014	18544144	reg1017316.p1	7.942	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	-109802	+	AK057339 NM_030812 BC028909 U20582	-462233	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	-599214	+	NM_152375	263344	+	NM_001135254 NM_002584 NM_013945 X96743	413420	+	NM_152232 AB527225	642076	-	AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_152375|KLHDC7A|127707|kelch domain containing 7A##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2	0.997303	CTCF.p2:10:0.997
chr13	24152935	24153098	reg1017802.p1	7.942	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-8561	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-145176	-	TSC_hg19_v1_chr13_-_23949652 AK125458	-203366	-	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	516	+	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	310000	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	310498	-	NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase	0.141078	
chr17	56422314	56422444	reg1016913.p2	7.942	+	TSC_hg19_v1_chr17_+_56414668 AK000271 BC050403 BC032475	-7690	+	AK311306 TSC_hg19_v1_chr17_+_56414566 BC064565	-7810	+	AX721088 TSC_hg19_v1_chr17_-_56409882	-12502	-	AB527904 CR407663 EU446710 TSC_hg19_v1_chr17_-_56429531 AK311986 U38817 BC002802 U38818 NM_003168 U43923 AK129758	7157	-	AB527734 TSC_hg19_v1_chr17_-_56492959 AK296769 AK000322 BC109028	70657	-	TSC_hg19_v1_chr17_-_56494896 CR749257	72514	-	AK000271|LOC100506779|100506779|uncharacterized LOC100506779##BC050403|LOC100506779|100506779|uncharacterized LOC100506779##BC032475|LOC100506779|100506779|uncharacterized LOC100506779##AK311306|LOC100506779|100506779|uncharacterized LOC100506779##BC064565|LOC100506779|100506779|uncharacterized LOC100506779##CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK296769|RNF43|54894|ring finger protein 43##AK000322|RNF43|54894|ring finger protein 43##BC109028|RNF43|54894|ring finger protein 43##CR749257|RNF43|54894|ring finger protein 43	0.162405	
chr9	82093497	82093636	reg1016314.p1	7.942	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	-1181508	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	-1242536	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-1447382	-	TSC_hg19_v1_chr9_+_82186879 NM_007005	93320	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	93958	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	94119	+	AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.042007	
chr7	22122628	22122713	reg1015108.p2	7.941	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-137188	-	AJ320497 NM_003777	-539838	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-654346	+	AL833195 NM_012294	273851	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	417177	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	644153	+	AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)	0.0	
chr9	75637999	75638099	reg1016532.p1	7.941	+	NM_000689	-69817	-	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	-70104	-	AF417578 NM_138691	-501333	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	128729	+	TSC_hg19_v1_chr9_+_75766797 BC001275	128754	+	NM_006914 BC051830 Y08639	1474225	+	NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##BC001275|ANXA1|301|annexin A1##NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B	0.625673	CTCF.p2:13:0.626
chr11	102604124	102604245	reg1017544.p1	7.940	+	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	-8531	-	AB527320 AF195192 AY358752 NM_022122	-27729	-	AB527354 NM_004771 Y12779	-108129	-	BT007442 DQ891931 DQ895118 X07820 BC002591 AK222601 AK313960 NM_002425	47155	-	AB463107 BT006874 BT020147 DQ890729 DQ893904 AK223035 BC013875 M15996 TSC_hg19_v1_chr11_-_102668890 AK024818 AK098450 AK130687 AK223281 AK297723 X05231 M13509 X54925 AK301340	64672	-	TSC_hg19_v1_chr11_-_102668892 NM_001145938 NM_002421	64744	-	BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##BT007442|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ891931|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ895118|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##X07820|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##BC002591|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##AK222601|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##AK313960|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##NM_002425|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##BT006874|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##BT020147|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##DQ890729|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##DQ893904|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK223035|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##BC013875|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##M15996|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK024818|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK098450|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK130687|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK223281|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK297723|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##X05231|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##M13509|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##X54925|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK301340|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##NM_001145938|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##NM_002421|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)	0.998231	CTCF.p2:6:0.998
chr6	12845047	12845175	reg1017319.p1	7.940	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-128068	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-128168	+	TSC_hg19_v1_chr6_+_12514301 D28417	-330809	+	AK091836 AX747210 NM_001242698	450706	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	483589	-	AK027010 NM_001242630	563257	-	AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.315198	CTCF.p2:15:0.315
chr6_mcf_hap5	4832884	4833001	reg1017198.p2	7.940	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.734401	CTCF.p2:0:0.734
chr9	100686131	100686244	reg1011260.p2	7.940	+	TSC_hg19_v1_chr9_-_100684783 CU678254 DQ892983 DQ896231 AY189280 AF151053 AK309270 BC002863 AK000213 AK302701 NM_016481	-1377	-	AB464529 TSC_hg19_v1_chr9_+_100616210	-69985	+	TSC_hg19_v1_chr9_+_100615409 NM_004473	-70716	+	AF306683 AF306682 AL833094 AY255672 NM_197978 AY244805	14334	-	AF228713 AF322875 BC048324 AK292441 NM_018437	20930	-	TSC_hg19_v1_chr9_+_100745521 NM_006401	59318	+	DQ892983|C9orf156|51531|chromosome 9 open reading frame 156##DQ896231|C9orf156|51531|chromosome 9 open reading frame 156##AY189280|C9orf156|51531|chromosome 9 open reading frame 156##AF151053|C9orf156|51531|chromosome 9 open reading frame 156##AK309270|C9orf156|51531|chromosome 9 open reading frame 156##BC002863|C9orf156|51531|chromosome 9 open reading frame 156##AK000213|C9orf156|51531|chromosome 9 open reading frame 156##AK302701|C9orf156|51531|chromosome 9 open reading frame 156##NM_016481|C9orf156|51531|chromosome 9 open reading frame 156##NM_004473|FOXE1|2304|forkhead box E1 (thyroid transcription factor 2)##AF306683|HEMGN|55363|hemogen##AF306682|HEMGN|55363|hemogen##AL833094|HEMGN|55363|hemogen##AY255672|HEMGN|55363|hemogen##NM_197978|HEMGN|55363|hemogen##AY244805|HEMGN|55363|hemogen##AF228713|HEMGN|55363|hemogen##AF322875|HEMGN|55363|hemogen##BC048324|HEMGN|55363|hemogen##AK292441|HEMGN|55363|hemogen##NM_018437|HEMGN|55363|hemogen##NM_006401|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	0.99395	CTCF.p2:-11:0.994
chr9	123748173	123748300	reg1018729.p1	7.939	+	TSC_hg19_v1_chr9_-_123691445 NM_001190945 AK315476	-56776	-	AK090468 NM_005658	-59064	-	AB590501 BT019408 CU692854 TSC_hg19_v1_chr9_-_123688443 U19261 BC024145	-59833	-	M57729 BC113738 BC113740 AK310774 AK310780 BC022299 NM_001735	64308	-	TSC_hg19_v1_chr9_+_123837236 AK307387 BC089415	89026	+	TSC_hg19_v1_chr9_-_123837410 AB209031	89194	-	NM_001190945|TRAF1|7185|TNF receptor-associated factor 1##AK315476|TRAF1|7185|TNF receptor-associated factor 1##AK090468|TRAF1|7185|TNF receptor-associated factor 1##NM_005658|TRAF1|7185|TNF receptor-associated factor 1##BT019408|TRAF1|7185|TNF receptor-associated factor 1##U19261|TRAF1|7185|TNF receptor-associated factor 1##BC024145|TRAF1|7185|TNF receptor-associated factor 1##M57729|C5|727|complement component 5##BC113738|C5|727|complement component 5##BC113740|C5|727|complement component 5##AK310774|C5|727|complement component 5##AK310780|C5|727|complement component 5##BC022299|C5|727|complement component 5##NM_001735|C5|727|complement component 5##AK307387|CNTRL|11064|centriolin##BC089415|CNTRL|11064|centriolin##AB209031|C5|727|complement component 5	0.154132	
chr1	198655386	198655510	reg1016858.p2	7.938	+	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-47118	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-47223	+	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	-47275	+	TSC_hg19_v1_chr1_-_198906559 EF413001	251099	-	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	1341421	+	AK316513 TSC_hg19_v1_chr1_+_200011716	1356276	+	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	0.913837	CTCF.p2:9:0.914
chr6	89952436	89952538	reg1018904.p1	7.938	+	AK313609 NM_002042	-24992	-	TSC_hg19_v1_chr6_+_89855838 BC035036 NM_001010853 AK302464 BC045583	-96606	+	AF449428 AB527997 CU692392 TSC_hg19_v1_chr6_-_89827756 AK314008 BC021715 NM_080743	-124785	-	BC130352 BC130354 M86868 NM_002043	72464	-	AB464335 DQ895144 EU176317 AF161502 U93243 TSC_hg19_v1_chr6_-_90062340	109829	-	AJ245898 TSC_hg19_v1_chr6_-_90062433 AF151834	109906	-	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1##NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1##BC035036|PM20D2|135293|peptidase M20 domain containing 2##NM_001010853|PM20D2|135293|peptidase M20 domain containing 2##AK302464|PM20D2|135293|peptidase M20 domain containing 2##BC045583|PM20D2|135293|peptidase M20 domain containing 2##AF449428|SRSF12|135295|serine/arginine-rich splicing factor 12##AK314008|SRSF12|135295|serine/arginine-rich splicing factor 12##BC021715|SRSF12|135295|serine/arginine-rich splicing factor 12##NM_080743|SRSF12|135295|serine/arginine-rich splicing factor 12##BC130352|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##BC130354|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##M86868|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##NM_002043|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##DQ895144|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##EU176317|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AF161502|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##U93243|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AJ245898|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AF151834|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U	0.812634	CTCF.p2:-5:0.813
chr11	1940011	1940106	reg1016019.p2	7.937	+	NM_001013254 NM_001013255	-47933	+	NM_001013253	-50156	+	AK092071 AX747343 NM_001242932	-53664	+	NM_001042780 NM_001042781 NM_001042782 NM_006757 BC062430 TSC_hg19_v1_chr11_+_1940935 BX640689 BC050446 AK056968	829	+	TSC_hg19_v1_chr11_+_1968573 NM_021134 U26596 Z49254 AK313805 AK128774	28483	+	BC027710 TSC_hg19_v1_chr11_+_1968589	28531	+	NM_001013254|LSP1|4046|lymphocyte-specific protein 1##NM_001013255|LSP1|4046|lymphocyte-specific protein 1##NM_001013253|LSP1|4046|lymphocyte-specific protein 1##AK092071|LSP1|4046|lymphocyte-specific protein 1##NM_001242932|LSP1|4046|lymphocyte-specific protein 1##NM_001042780|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042781|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042782|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_006757|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC062430|TNNT3|7140|troponin T type 3 (skeletal, fast)##BX640689|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC050446|TNNT3|7140|troponin T type 3 (skeletal, fast)##AK056968|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_021134|MRPL23|6150|mitochondrial ribosomal protein L23##U26596|MRPL23|6150|mitochondrial ribosomal protein L23##Z49254|MRPL23|6150|mitochondrial ribosomal protein L23##AK313805|MRPL23|6150|mitochondrial ribosomal protein L23##AK128774|MRPL23|6150|mitochondrial ribosomal protein L23##BC027710|MRPL23|6150|mitochondrial ribosomal protein L23	0.925726	CTCF.p2:-4:0.908
chr16	55069087	55069190	reg1016688.p2	7.937	+	AY335945 BC131510 NM_001252197 NM_005853	-104028	+	AF275804 TSC_hg19_v1_chr16_-_54962719	-106423	-	TSC_hg19_v1_chr16_-_54320368 AY335943 NM_024336	-748745	-	AY335937 NM_024335	289332	+	TSC_hg19_v1_chr16_+_55513109 NM_004530 X58968 AK312711 BC002576 DQ891952 DQ895138 AB385158 CU678050 J03210	443982	+	AK310314 NM_001127891	446332	+	AY335945|IRX5|10265|iroquois homeobox 5##BC131510|IRX5|10265|iroquois homeobox 5##NM_001252197|IRX5|10265|iroquois homeobox 5##NM_005853|IRX5|10265|iroquois homeobox 5##AF275804|CRNDE|643911|colorectal neoplasia differentially expressed (non-protein coding)##AY335943|IRX3|79191|iroquois homeobox 3##NM_024336|IRX3|79191|iroquois homeobox 3##AY335937|IRX6|79190|iroquois homeobox 6##NM_024335|IRX6|79190|iroquois homeobox 6##NM_004530|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##X58968|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##AK312711|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##BC002576|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##DQ891952|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##DQ895138|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##J03210|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##AK310314|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##NM_001127891|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	0.066014	
chr17	34581503	34581626	reg1018214.p1	7.937	+	AY766447 AY766449 AY766450 AY766451 AY766452 AY766453 AY766454 AY766455 AY766456 AY766457 AY766458 BC070310 BC092445 NM_001001435 NM_207007 BC071718 BC130456 BC130458 BC144393 BC144394 HQ258694	-43062	+	D63785 BT006783 BC146914 BC146919 BC147008 BC147013 BC007783 X52149 BC027888 BC063472 NM_001001437 NM_021006 BC107710	-57459	-	BC033670 AK301823 BC071680 AK225985 AK292257 NM_001001417	-77614	-	BC033670 AL136860 AK301823 BC071680 AK225985 AK292308 NM_001001418	10430	-	D63785 BT006783 BC146914 BC146919 BC147008 BC147013 BC007783 X52149 BC027888 BC063472 NM_001001437 NM_021006 BC107710	44115	-	AY766447 AY766449 AY766450 AY766455 AY766456 BC070310 NM_001001435 NM_207007 BC071718 BC130456 BC130458 BC144393 BC144394 HQ258694	58504	+	AY766447|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766449|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766450|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766451|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766452|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766453|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766454|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766455|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766457|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC070310|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC092445|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_001001435|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_207007|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##BC130456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC130458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144393|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144394|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##HQ258694|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BT006783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC146914|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC146919|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147008|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147013|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC007783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##X52149|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC027888|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC063472|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_001001437|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_021006|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC107710|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK292257|TBC1D3B|414059|TBC1 domain family, member 3B##NM_001001417|TBC1D3B|414059|TBC1 domain family, member 3B##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK292308|TBC1D3C|414060|TBC1 domain family, member 3C##NM_001001418|TBC1D3C|414060|TBC1 domain family, member 3C##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BT006783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC146914|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC146919|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147008|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147013|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC007783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##X52149|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC027888|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC063472|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_001001437|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_021006|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC107710|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##AY766447|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766449|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766450|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766455|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC070310|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_001001435|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_207007|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##BC130456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC130458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144393|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144394|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##HQ258694|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2	0.243231	CTCF.p2:12:0.231
chr22	37442115	37442253	reg1020499.p1	7.937	+	TSC_hg19_v1_chr22_+_37415797 BC016737 AB208824	-26346	+	NM_001013436 NM_001130517 NM_021126 TSC_hg19_v1_chr22_+_37415789	-26439	+	D87292 TSC_hg19_v1_chr22_-_37415489 AK091874 BC010148 AK000862 AK223521 AK301300 NM_003312	-26703	-	TSC_hg19_v1_chr22_+_37447781 NM_024681 BC025403 BC031038 BC009961 AK022304	5595	+	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	57391	-	CR456446 TSC_hg19_v1_chr22_-_37505748	63494	-	BC016737|MPST|4357|mercaptopyruvate sulfurtransferase##AB208824|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001013436|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001130517|MPST|4357|mercaptopyruvate sulfurtransferase##NM_021126|MPST|4357|mercaptopyruvate sulfurtransferase##D87292|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK091874|TST|7263|thiosulfate sulfurtransferase (rhodanese)##BC010148|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK000862|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK223521|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK301300|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_003312|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_024681|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC025403|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC031038|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC009961|KCTD17|79734|potassium channel tetramerisation domain containing 17##AK022304|KCTD17|79734|potassium channel tetramerisation domain containing 17##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##CR456446|TMPRSS6|164656|transmembrane protease, serine 6	0.184242	
chr3	143152761	143152864	reg1016744.p1	7.937	+	BC067737 TSC_hg19_v1_chr3_+_142895211	-257641	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-314161	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-432382	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	414455	-	NM_173552 AK315082	537840	+	TSC_hg19_v1_chr3_+_143690915 BC037293	538178	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58	0.22511	CTCF.p2:-14:0.225
chr15	85049172	85049301	reg1016346.p2	7.936	+	NM_001243531	-207995	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-726409	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-933008	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	95045	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	148236	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	148270	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	0.919612	CTCF.p2:17:0.920
chr17	58647231	58647354	reg1016987.p1	7.936	+	AK307666 TSC_hg19_v1_chr17_-_58603582 BC018121 AF017782 D86981 NM_006380	-43755	-	AB587349 TSC_hg19_v1_chr17_-_58603343 AK292227	-43963	-	TSC_hg19_v1_chr17_+_58499858 NM_181707 BC036356 BC048806	-147413	+	TSC_hg19_v1_chr17_+_58677553 BC060877 NM_003620 AK312902 AK299773 U78305	30252	+	TSC_hg19_v1_chr17_+_58677710 BC016480 BC042418 BC032826 BC033893 DQ891047 EU176552 BT009780	30397	+	TSC_hg19_v1_chr17_+_58755255 NM_001099432 NM_017679 AK304791 AK225757 BC017390 AK314744 AF361219 BC117275 BC143386 BC143387 AK025510	107921	+	AK307666|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##BC018121|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##AF017782|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##D86981|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##NM_006380|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##AK292227|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##NM_181707|C17orf64|124773|chromosome 17 open reading frame 64##BC036356|C17orf64|124773|chromosome 17 open reading frame 64##BC048806|C17orf64|124773|chromosome 17 open reading frame 64##BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_001099432|BCAS3|54828|breast carcinoma amplified sequence 3##NM_017679|BCAS3|54828|breast carcinoma amplified sequence 3##AK304791|BCAS3|54828|breast carcinoma amplified sequence 3##AK225757|BCAS3|54828|breast carcinoma amplified sequence 3##BC017390|BCAS3|54828|breast carcinoma amplified sequence 3##AK314744|BCAS3|54828|breast carcinoma amplified sequence 3##AF361219|BCAS3|54828|breast carcinoma amplified sequence 3##BC117275|BCAS3|54828|breast carcinoma amplified sequence 3##BC143386|BCAS3|54828|breast carcinoma amplified sequence 3##BC143387|BCAS3|54828|breast carcinoma amplified sequence 3##AK025510|BCAS3|54828|breast carcinoma amplified sequence 3	0.891182	CTCF.p2:5:0.891
chr2	85864721	85864857	reg1019820.p1	7.936	+	TSC_hg19_v1_chr2_+_85843375 AK309485	-21396	+	TSC_hg19_v1_chr2_+_85843315 AK001047 CU688266 BC001384	-21469	+	AF353989 TSC_hg19_v1_chr2_+_85843308 AF132955 AK222852	-21480	+	TSC_hg19_v1_chr2_-_85888519 AB439563 AB439564 AB439565 AB439566	23786	-	NM_000542 NM_198843	31074	-	NM_006433 NM_012483 X54101 AK310057 AK311537 AK311012 AK311657 BC063245 AK304728 TSC_hg19_v1_chr2_+_85921514 DQ892267 DQ895468 BC023576 CR541859 X05044	56691	+	AK309485|USP39|10713|ubiquitin specific peptidase 39##AK001047|USP39|10713|ubiquitin specific peptidase 39##BC001384|USP39|10713|ubiquitin specific peptidase 39##AF353989|USP39|10713|ubiquitin specific peptidase 39##AF132955|USP39|10713|ubiquitin specific peptidase 39##AK222852|USP39|10713|ubiquitin specific peptidase 39##AB439563|SFTPB|6439|surfactant protein B##AB439565|SFTPB|6439|surfactant protein B##NM_000542|SFTPB|6439|surfactant protein B##NM_198843|SFTPB|6439|surfactant protein B##NM_006433|GNLY|10578|granulysin##NM_012483|GNLY|10578|granulysin##X54101|GNLY|10578|granulysin##AK310057|GNLY|10578|granulysin##AK311537|GNLY|10578|granulysin##AK311012|GNLY|10578|granulysin##AK311657|GNLY|10578|granulysin##BC063245|GNLY|10578|granulysin##AK304728|GNLY|10578|granulysin##DQ892267|GNLY|10578|granulysin##DQ895468|GNLY|10578|granulysin##BC023576|GNLY|10578|granulysin##CR541859|GNLY|10578|granulysin##X05044|GNLY|10578|granulysin	0.997151	CTCF.p2:-1:0.997
chr5	119991670	119991770	reg1016055.p1	7.936	+	TSC_hg19_v1_chr5_+_119800010 AF242769 NM_016644	-191709	+	TSC_hg19_v1_chr5_+_119799994 BC092474	-191772	+	BC011941 TSC_hg19_v1_chr5_-_119740564	-251170	-	BC034419 NM_177478 HQ258558	1195933	+	AK058015 NM_152546 TSC_hg19_v1_chr5_+_121297676 BC031222 CU689120 AY611630	1305971	+	AK316309 AK307732 NM_001178102	1421141	-	AF242769|PRR16|51334|proline rich 16##NM_016644|PRR16|51334|proline rich 16##BC092474|PRR16|51334|proline rich 16##BC034419|FTMT|94033|ferritin mitochondrial##NM_177478|FTMT|94033|ferritin mitochondrial##HQ258558|FTMT|94033|ferritin mitochondrial##AK058015|SRFBP1|153443|serum response factor binding protein 1##NM_152546|SRFBP1|153443|serum response factor binding protein 1##BC031222|SRFBP1|153443|serum response factor binding protein 1##AY611630|SRFBP1|153443|serum response factor binding protein 1##AK316309|LOX|4015|lysyl oxidase##AK307732|LOX|4015|lysyl oxidase##NM_001178102|LOX|4015|lysyl oxidase	0.998833	CTCF.p2:0:0.999
chr8	27459695	27459796	reg1015871.p1	7.936	+	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	-111087	+	AK314787 U62431 NM_000742	-122974	-	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-276668	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	12460	-	AB527877 TSC_hg19_v1_chr8_-_27472317 NM_001831	12567	-	BC060811 TSC_hg19_v1_chr8_+_27491395	31644	+	AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin##NM_001831|CLU|1191|clusterin##BC060811|SCARA3|51435|scavenger receptor class A, member 3	0.965211	CTCF.p2:12:0.965
chr17	20550101	20550238	reg1019027.p1	7.935	+	NM_001190790	-67133	+	BC105943 AK290263 NM_001042685 AK296659	-179334	-	TSC_hg19_v1_chr17_+_20224469 BC036241	-325703	+	AK057473 TSC_hg19_v1_chr17_+_20771859 BC041488 EF565107	221636	+	CU686685 BC068597 NM_001004306	249223	-	TSC_hg19_v1_chr17_-_20946322 AB590105 AB028986 NM_015276	396103	-	NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK290263|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001042685|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##BC036241|CCDC144C|348254|coiled-coil domain containing 144C##BC068597|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001004306|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##AB028986|USP22|23326|ubiquitin specific peptidase 22##NM_015276|USP22|23326|ubiquitin specific peptidase 22	0.050284	
chr1	78366496	78366610	reg1016461.p1	7.935	+	NM_001172309 NM_144573 AK298565 AK300728 AK307487 CR936630 BX648546 DQ464902 AF176780 AY211912 TSC_hg19_v1_chr1_+_78354351 BC055084	-12241	+	TSC_hg19_v1_chr1_+_78245342 BX537792 NM_198549 BC130387 BC144167 AK296411 AK092412 AX747532	-121219	+	TSC_hg19_v1_chr1_-_78225538 BC016663 AK308402 AB029020 AF383172 AF383173 AK022864 NM_015017 NM_201624 NM_201626	-141101	-	DQ895919 EU176379 U05040 TSC_hg19_v1_chr1_-_78444757 BC010083 BC017247 AK300032 AK301581 AK303568	78173	-	TSC_hg19_v1_chr1_-_78444772 NM_003902	78222	-	TSC_hg19_v1_chr1_+_78444987 AK297985	78419	+	NM_001172309|NEXN|91624|nexilin (F actin binding protein)##NM_144573|NEXN|91624|nexilin (F actin binding protein)##AK298565|NEXN|91624|nexilin (F actin binding protein)##AK300728|NEXN|91624|nexilin (F actin binding protein)##AK307487|NEXN|91624|nexilin (F actin binding protein)##CR936630|NEXN|91624|nexilin (F actin binding protein)##BX648546|NEXN|91624|nexilin (F actin binding protein)##DQ464902|NEXN|91624|nexilin (F actin binding protein)##AF176780|NEXN|91624|nexilin (F actin binding protein)##AY211912|NEXN|91624|nexilin (F actin binding protein)##BC055084|NEXN|91624|nexilin (F actin binding protein)##BX537792|FAM73A|374986|family with sequence similarity 73, member A##NM_198549|FAM73A|374986|family with sequence similarity 73, member A##BC130387|FAM73A|374986|family with sequence similarity 73, member A##BC144167|FAM73A|374986|family with sequence similarity 73, member A##AK296411|FAM73A|374986|family with sequence similarity 73, member A##AK092412|FAM73A|374986|family with sequence similarity 73, member A##BC016663|USP33|23032|ubiquitin specific peptidase 33##AK308402|USP33|23032|ubiquitin specific peptidase 33##AB029020|USP33|23032|ubiquitin specific peptidase 33##AF383172|USP33|23032|ubiquitin specific peptidase 33##AF383173|USP33|23032|ubiquitin specific peptidase 33##AK022864|USP33|23032|ubiquitin specific peptidase 33##NM_015017|USP33|23032|ubiquitin specific peptidase 33##NM_201624|USP33|23032|ubiquitin specific peptidase 33##NM_201626|USP33|23032|ubiquitin specific peptidase 33##DQ895919|FUBP1|8880|far upstream element (FUSE) binding protein 1##EU176379|FUBP1|8880|far upstream element (FUSE) binding protein 1##U05040|FUBP1|8880|far upstream element (FUSE) binding protein 1##BC010083|FUBP1|8880|far upstream element (FUSE) binding protein 1##BC017247|FUBP1|8880|far upstream element (FUSE) binding protein 1##AK300032|FUBP1|8880|far upstream element (FUSE) binding protein 1##AK301581|FUBP1|8880|far upstream element (FUSE) binding protein 1##AK303568|FUBP1|8880|far upstream element (FUSE) binding protein 1##NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1##AK297985|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4	0.0	
chr2	40675752	40675866	reg1018466.p1	7.935	+	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-18378	-	TSC_hg19_v1_chr2_-_40006408 NM_025264	-669395	-	TSC_hg19_v1_chr2_-_40006399 CU678598 EU831465 EU831552 AK301353 AK298178 AK226034 BC004163 BC013299 AK307754 AL832115 AK093580 AX748213 AK292002	-669515	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	3413	-	Y12878 Y12885 AK291696 BX537482 NM_001112802	63763	-	AK124893 NM_001242815	1505133	-	AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_025264|THUMPD2|80745|THUMP domain containing 2##EU831465|THUMPD2|80745|THUMP domain containing 2##EU831552|THUMPD2|80745|THUMP domain containing 2##AK301353|THUMPD2|80745|THUMP domain containing 2##AK298178|THUMPD2|80745|THUMP domain containing 2##AK226034|THUMPD2|80745|THUMP domain containing 2##BC004163|THUMPD2|80745|THUMP domain containing 2##BC013299|THUMPD2|80745|THUMP domain containing 2##AK307754|THUMPD2|80745|THUMP domain containing 2##AL832115|THUMPD2|80745|THUMP domain containing 2##AK093580|THUMPD2|80745|THUMP domain containing 2##AK292002|THUMPD2|80745|THUMP domain containing 2##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950	0.96735	CTCF.p2:8:0.967
chr3	31173762	31173882	reg1016569.p1	7.935	+	AL832766 NM_207359	-237670	-	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-525419	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-525800	+	TSC_hg19_v1_chr3_+_31574119 AK311488	400308	+	TSC_hg19_v1_chr3_+_31574468 AK074587	400627	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	400660	+	AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.930214	CTCF.p2:33:0.930
chr7	151402824	151402929	reg1017774.p2	7.935	+	TSC_hg19_v1_chr7_-_151329284 BT007127 BC020540 AB025580 AF087875 AK314646 AK001887 NM_024429	-73596	-	TSC_hg19_v1_chr7_-_151216982 BC107705 AK125446 BC016155 NM_005614	-185891	-	TSC_hg19_v1_chr7_-_151216769 BC066307	-186107	-	BC068598 TSC_hg19_v1_chr7_-_151511929 NM_001040633	109064	-	AK074675 NM_016203	171386	-	NM_145292 AF440404 AK315667 AK093091 AX747915 BC022021 AF440400 BC025391	250622	+	BT007127|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC020540|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AB025580|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AF087875|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK314646|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK001887|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_024429|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC107705|RHEB|6009|Ras homolog enriched in brain##AK125446|RHEB|6009|Ras homolog enriched in brain##BC016155|RHEB|6009|Ras homolog enriched in brain##NM_005614|RHEB|6009|Ras homolog enriched in brain##BC066307|RHEB|6009|Ras homolog enriched in brain##BC068598|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_001040633|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK074675|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_016203|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_145292|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440404|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK315667|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK093091|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC022021|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440400|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC025391|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	0.989418	CTCF.p2:5:0.989
chr16	33764043	33764179	reg1016101.p1	7.934	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-501978	+	AL133588 NM_016212	-502597	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-558513	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	12891161	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	12891195	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	12958951	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	3.945477	CTCF.p2:-9:0.973	CTCF.p2:-47:0.978	CTCF.p2:67:0.995	CTCF.p2:106:0.999
chr7	156742303	156742392	reg1017328.p1	7.934	+	TSC_hg19_v1_chr7_-_156685878 NM_022458	-56431	-	TSC_hg19_v1_chr7_-_156685868 AL834394 AB463099 AM392621 AM393143 AM393254 AM393828 CU676016 AF402318 BC017663 BC063649 AF107454 AK021727 AK291037 AK299753	-56600	-	TSC_hg19_v1_chr7_-_156468370 CU688401	-273925	-	TSC_hg19_v1_chr7_+_156742419 AY576779 NM_138400	68	+	TSC_hg19_v1_chr7_+_156798463 AY927456 AY927462 AY927463 AY927458	56153	+	AY927459 AY927461 TSC_hg19_v1_chr7_-_156802024 AY927460 AY927464 NM_001165255	59707	-	NM_022458|LMBR1|64327|limb region 1 homolog (mouse)##AL834394|LMBR1|64327|limb region 1 homolog (mouse)##AM392621|LMBR1|64327|limb region 1 homolog (mouse)##AM393143|LMBR1|64327|limb region 1 homolog (mouse)##AM393254|LMBR1|64327|limb region 1 homolog (mouse)##AM393828|LMBR1|64327|limb region 1 homolog (mouse)##AF402318|LMBR1|64327|limb region 1 homolog (mouse)##BC017663|LMBR1|64327|limb region 1 homolog (mouse)##BC063649|LMBR1|64327|limb region 1 homolog (mouse)##AK021727|LMBR1|64327|limb region 1 homolog (mouse)##AK291037|LMBR1|64327|limb region 1 homolog (mouse)##AK299753|LMBR1|64327|limb region 1 homolog (mouse)##AY576779|NOM1|64434|nucleolar protein with MIF4G domain 1##NM_138400|NOM1|64434|nucleolar protein with MIF4G domain 1##AY927462|MNX1|3110|motor neuron and pancreas homeobox 1##AY927459|MNX1|3110|motor neuron and pancreas homeobox 1##AY927461|MNX1|3110|motor neuron and pancreas homeobox 1##AY927460|MNX1|3110|motor neuron and pancreas homeobox 1##AY927464|MNX1|3110|motor neuron and pancreas homeobox 1##NM_001165255|MNX1|3110|motor neuron and pancreas homeobox 1	0.999764	CTCF.p2:-3:1.000
chr12	6944951	6945090	reg1016784.p1	7.932	+	BC080630 TSC_hg19_v1_chr12_+_6937783 BC067251 BC017217	-7140	+	TSC_hg19_v1_chr12_+_6937571 NM_014262 AK025976	-7448	+	TSC_hg19_v1_chr12_+_6931000 AK316512 BC002353 NM_014449 NM_019858 U47925 U47928 BC080585 AK315938 BC007918 AK296359	-14153	+	NM_002075 U47930	4354	+	TSC_hg19_v1_chr12_-_6960436 BC002551 AK092246 AK291421 AX747429 AK312843 NM_031299	15424	-	TSC_hg19_v1_chr12_-_6961091 BC036512	16116	-	BC080630|LEPREL2|10536|leprecan-like 2##BC067251|LEPREL2|10536|leprecan-like 2##BC017217|LEPREL2|10536|leprecan-like 2##NM_014262|LEPREL2|10536|leprecan-like 2##AK025976|LEPREL2|10536|leprecan-like 2##AK316512|GPR162|27239|G protein-coupled receptor 162##BC002353|GPR162|27239|G protein-coupled receptor 162##NM_014449|GPR162|27239|G protein-coupled receptor 162##NM_019858|GPR162|27239|G protein-coupled receptor 162##U47925|GPR162|27239|G protein-coupled receptor 162##U47928|GPR162|27239|G protein-coupled receptor 162##BC080585|GPR162|27239|G protein-coupled receptor 162##AK315938|GPR162|27239|G protein-coupled receptor 162##BC007918|GPR162|27239|G protein-coupled receptor 162##AK296359|GPR162|27239|G protein-coupled receptor 162##NM_002075|GNB3|2784|guanine nucleotide binding protein (G protein), beta polypeptide 3##U47930|GNB3|2784|guanine nucleotide binding protein (G protein), beta polypeptide 3##BC002551|CDCA3|83461|cell division cycle associated 3##AK092246|CDCA3|83461|cell division cycle associated 3##AK291421|CDCA3|83461|cell division cycle associated 3##AK312843|CDCA3|83461|cell division cycle associated 3##NM_031299|CDCA3|83461|cell division cycle associated 3##BC036512|CDCA3|83461|cell division cycle associated 3	0.988721	CTCF.p2:18:0.989
chr20	6746218	6746376	reg1016770.p2	7.932	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-642134	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-642420	-	TSC_hg19_v1_chr20_-_6103678 AK314394 BC040545 AF443278	-642623	-	BC069214 NM_001200	2447	+	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	1174805	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	1254003	-	AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AK314394|FERMT1|55612|fermitin family member 1##BC040545|FERMT1|55612|fermitin family member 1##AF443278|FERMT1|55612|fermitin family member 1##BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4	0.997559	CTCF.p2:5:0.998
chr4	71875848	71875968	reg1018472.p1	7.932	+	M60527 TSC_hg19_v1_chr4_+_71859434 BC114617 JF806429 BT019941 BT019942 CR536527 CR541876	-16437	+	TSC_hg19_v1_chr4_+_71859320 NM_000788 AK303292 AK313523 BC103764	-16601	+	NM_001244766 NM_001244767 NM_173468 AK093545 AX748194 TSC_hg19_v1_chr4_+_71768085 AK299481 BC038112 AK313513	-107795	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	176815	+	AF069510 AB470072 AF053753 AF053754 AF310248 EF531618 TSC_hg19_v1_chr4_+_72102322	226378	+	BC030977 NM_003759 AF007216 AK308038 CU689062	328959	+	M60527|DCK|1633|deoxycytidine kinase##BC114617|DCK|1633|deoxycytidine kinase##JF806429|DCK|1633|deoxycytidine kinase##BT019941|DCK|1633|deoxycytidine kinase##BT019942|DCK|1633|deoxycytidine kinase##CR536527|DCK|1633|deoxycytidine kinase##CR541876|DCK|1633|deoxycytidine kinase##NM_000788|DCK|1633|deoxycytidine kinase##AK303292|DCK|1633|deoxycytidine kinase##AK313523|DCK|1633|deoxycytidine kinase##BC103764|DCK|1633|deoxycytidine kinase##NM_001244766|MOB1B|92597|MOB kinase activator 1B##NM_001244767|MOB1B|92597|MOB kinase activator 1B##NM_173468|MOB1B|92597|MOB kinase activator 1B##AK093545|MOB1B|92597|MOB kinase activator 1B##AK299481|MOB1B|92597|MOB kinase activator 1B##BC038112|MOB1B|92597|MOB kinase activator 1B##AK313513|MOB1B|92597|MOB kinase activator 1B##AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	0.983338	CTCF.p2:3:0.983
chr8	27181526	27181707	reg1000967.p2	7.932	+	NM_004103 D45853 U43522	-1693	+	TSC_hg19_v1_chr8_+_27169015 BC036651 NM_173174	-12615	+	TSC_hg19_v1_chr8_-_27168793 AB029021 AF492463 BC018337 NM_171982	-12808	-	NM_173176 TSC_hg19_v1_chr8_+_27183022	1401	+	TSC_hg19_v1_chr8_+_27183049 BC042599	1436	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	1461	+	NM_004103|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##D45853|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##U43522|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC036651|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173174|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB029021|TRIM35|23087|tripartite motif containing 35##AF492463|TRIM35|23087|tripartite motif containing 35##BC018337|TRIM35|23087|tripartite motif containing 35##NM_171982|TRIM35|23087|tripartite motif containing 35##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta	0.066622	
chr1	11809358	11809449	reg1010654.p1	7.931	+	AF312374 TSC_hg19_v1_chr1_+_11796222 BC011946 AB528670 AF165187 DQ892619 DQ895859	-13165	+	TSC_hg19_v1_chr1_+_11796198 AK290042 BC017328	-13213	+	TSC_hg19_v1_chr1_+_11796132 NM_001040194 NM_001040195 NM_001040196 NM_001040197 NM_020350	-13258	+	AL833920 TSC_hg19_v1_chr1_+_11826837	17415	+	TSC_hg19_v1_chr1_-_11866019 BC053509 AY046564 AK312907	56604	-	TSC_hg19_v1_chr1_-_11866080 NM_005957	56716	-	AF312374|AGTRAP|57085|angiotensin II receptor-associated protein##BC011946|AGTRAP|57085|angiotensin II receptor-associated protein##AF165187|AGTRAP|57085|angiotensin II receptor-associated protein##DQ892619|AGTRAP|57085|angiotensin II receptor-associated protein##DQ895859|AGTRAP|57085|angiotensin II receptor-associated protein##AK290042|AGTRAP|57085|angiotensin II receptor-associated protein##BC017328|AGTRAP|57085|angiotensin II receptor-associated protein##NM_001040194|AGTRAP|57085|angiotensin II receptor-associated protein##NM_001040195|AGTRAP|57085|angiotensin II receptor-associated protein##NM_001040196|AGTRAP|57085|angiotensin II receptor-associated protein##NM_001040197|AGTRAP|57085|angiotensin II receptor-associated protein##NM_020350|AGTRAP|57085|angiotensin II receptor-associated protein##AL833920|C1orf167|284498|chromosome 1 open reading frame 167##BC053509|MTHFR|4524|methylenetetrahydrofolate reductase (NAD(P)H)##AY046564|MTHFR|4524|methylenetetrahydrofolate reductase (NAD(P)H)##AK312907|MTHFR|4524|methylenetetrahydrofolate reductase (NAD(P)H)##NM_005957|MTHFR|4524|methylenetetrahydrofolate reductase (NAD(P)H)	0.98721	CTCF.p2:9:0.947
chr17	39852322	39852449	reg1017050.p1	7.931	+	TSC_hg19_v1_chr17_+_39845142 BC005118 L26247 AF083441 BC008710 AF100737 AJ012375 DQ896700 EU176404 BT006645 CR457051	-7169	+	AK311209 TSC_hg19_v1_chr17_+_39845141	-7244	+	NM_005801 TSC_hg19_v1_chr17_+_39845138 AL050005 AK311862	-7252	+	NM_000805 BC069724 BC069762	16209	+	AB209105 AB463758 AK022007 AF040723 NM_001079870 NM_001079871 NM_177977	38504	-	TSC_hg19_v1_chr17_-_39928100 AB384746 CU680086	75717	-	BC005118|EIF1|10209|eukaryotic translation initiation factor 1##L26247|EIF1|10209|eukaryotic translation initiation factor 1##AF083441|EIF1|10209|eukaryotic translation initiation factor 1##BC008710|EIF1|10209|eukaryotic translation initiation factor 1##AF100737|EIF1|10209|eukaryotic translation initiation factor 1##AJ012375|EIF1|10209|eukaryotic translation initiation factor 1##DQ896700|EIF1|10209|eukaryotic translation initiation factor 1##EU176404|EIF1|10209|eukaryotic translation initiation factor 1##BT006645|EIF1|10209|eukaryotic translation initiation factor 1##CR457051|EIF1|10209|eukaryotic translation initiation factor 1##AK311209|EIF1|10209|eukaryotic translation initiation factor 1##NM_005801|EIF1|10209|eukaryotic translation initiation factor 1##AL050005|EIF1|10209|eukaryotic translation initiation factor 1##AK311862|EIF1|10209|eukaryotic translation initiation factor 1##NM_000805|GAST|2520|gastrin##BC069724|GAST|2520|gastrin##BC069762|GAST|2520|gastrin##AB209105|HAP1|9001|huntingtin-associated protein 1##AK022007|HAP1|9001|huntingtin-associated protein 1##AF040723|HAP1|9001|huntingtin-associated protein 1##NM_001079870|HAP1|9001|huntingtin-associated protein 1##NM_001079871|HAP1|9001|huntingtin-associated protein 1##NM_177977|HAP1|9001|huntingtin-associated protein 1	0.999633	CTCF.p2:21:1.000
chr9	114590643	114590767	reg1016641.p1	7.931	+	AL833535 NM_173521	-44930	-	BC041858 AK126055 NM_001080551	-68903	-	BC107574 TSC_hg19_v1_chr9_+_114423894 BC010384 BC016319 U31383 BC072671 BC015206 AB463708 AF493877	-166804	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	68409	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	68762	+	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	346815	-	AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##BC041858|C9orf84|158401|chromosome 9 open reading frame 84##AK126055|C9orf84|158401|chromosome 9 open reading frame 84##NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84##BC107574|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC010384|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC016319|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##U31383|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC072671|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC015206|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##AF493877|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1	0.833739	CTCF.p2:-33:0.834
chrX	73603576	73603674	reg1016193.p1	7.931	+	BC021176 NM_203303 TSC_hg19_v1_chrX_+_73524041 EU446947 EU831786 EU831864 CU676854	-79563	+	TSC_hg19_v1_chrX_-_73513379 AK311345	-90251	-	TSC_hg19_v1_chrX_-_73512419 AK057701	-91220	-	NM_006517 TSC_hg19_v1_chrX_+_73641331 U05315 AB085789	37621	+	AF155109 TSC_hg19_v1_chrX_-_73834424 BC013357	230792	-	BC002451 TSC_hg19_v1_chrX_-_73834428	230803	-	BC021176|ZCCHC13|389874|zinc finger, CCHC domain containing 13##NM_203303|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU446947|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831786|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831864|ZCCHC13|389874|zinc finger, CCHC domain containing 13##AK311345|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##AK057701|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##NM_006517|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##U05315|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##AB085789|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##AF155109|RLIM|51132|ring finger protein, LIM domain interacting##BC013357|RLIM|51132|ring finger protein, LIM domain interacting	0.970545	CTCF.p2:1:0.971
chr1	208042534	208042630	reg1013756.p1	7.930	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	-117099	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	-117189	+	NM_175710 BC109190 BC109191	-224095	+	BX640941 TSC_hg19_v1_chr1_-_208059392	16741	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	41801	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	41975	-	BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule	0.81834	CTCF.p2:-10:0.818
chr2	114285137	114285252	reg1013989.p1	7.930	+	AK122950 NM_012184 BC136428 AY344639 AF452723	-28458	+	AK290072 NM_172003 AK303653 AY343910 TSC_hg19_v1_chr2_+_114195398 AY320414 BC120991 BC120992 AK225251 AF452722	-89855	+	S77904 S77905 S77906 X69699 BC001060 AK292191 AK309154 AK225538 NM_003466 NM_013952 NM_013953 NM_013992 TSC_hg19_v1_chr2_-_114036499	-248701	-	AL137714 AK302089 AK308574 TSC_hg19_v1_chr2_+_114341674	56423	+	AK292759 AK309926 TSC_hg19_v1_chr2_+_114341689	56495	+	BC027921 TSC_hg19_v1_chr2_+_114341690	56505	+	AK122950|FOXD4L1|200350|forkhead box D4-like 1##NM_012184|FOXD4L1|200350|forkhead box D4-like 1##BC136428|FOXD4L1|200350|forkhead box D4-like 1##AY344639|FOXD4L1|200350|forkhead box D4-like 1##AF452723|FOXD4L1|200350|forkhead box D4-like 1##AK290072|CBWD2|150472|COBW domain containing 2##NM_172003|CBWD2|150472|COBW domain containing 2##AK303653|CBWD2|150472|COBW domain containing 2##AY343910|CBWD2|150472|COBW domain containing 2##AY320414|CBWD1|55871|COBW domain containing 1##BC120991|CBWD2|150472|COBW domain containing 2##BC120992|CBWD2|150472|COBW domain containing 2##AK225251|CBWD2|150472|COBW domain containing 2##AF452722|CBWD2|150472|COBW domain containing 2##S77904|PAX8|7849|paired box 8##S77905|PAX8|7849|paired box 8##S77906|PAX8|7849|paired box 8##X69699|PAX8|7849|paired box 8##BC001060|PAX8|7849|paired box 8##AK292191|PAX8|7849|paired box 8##AK309154|PAX8|7849|paired box 8##AK225538|PAX8|7849|paired box 8##NM_003466|PAX8|7849|paired box 8##NM_013952|PAX8|7849|paired box 8##NM_013953|PAX8|7849|paired box 8##NM_013992|PAX8|7849|paired box 8##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK292759|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene	0.011183	
chr20	44780655	44780753	reg1015649.p2	7.929	+	TSC_hg19_v1_chr20_+_44746952 AK222896 AJ300189 AB209660 AB590222 AX781593 AY225405 BT019901 DQ891804 DQ894988	-33739	+	TSC_hg19_v1_chr20_+_44746923 NM_001250 NM_152854 BC064518 BC012419 X60592	-33788	+	TSC_hg19_v1_chr20_-_44718581 NM_020967	-62093	-	BC136526 NM_021248	99624	-	TSC_hg19_v1_chr20_-_44937138 AK289584	156466	-	TSC_hg19_v1_chr20_-_44993030 AK300798 AF132949 AK222928 AK301022 BC021138 BC014191 AF455052 AK300207 AK315726 NM_015945 NM_173073 NM_173179	212331	-	AK222896|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AJ300189|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AB209660|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AY225405|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BT019901|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ891804|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ894988|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_001250|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_152854|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC064518|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC012419|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_020967|NCOA5|57727|nuclear receptor coactivator 5##BC136526|CDH22|64405|cadherin 22, type 2##NM_021248|CDH22|64405|cadherin 22, type 2##AK289584|CDH22|64405|cadherin 22, type 2##AK300798|SLC35C2|51006|solute carrier family 35, member C2##AF132949|SLC35C2|51006|solute carrier family 35, member C2##AK222928|SLC35C2|51006|solute carrier family 35, member C2##AK301022|SLC35C2|51006|solute carrier family 35, member C2##BC021138|SLC35C2|51006|solute carrier family 35, member C2##BC014191|SLC35C2|51006|solute carrier family 35, member C2##AF455052|SLC35C2|51006|solute carrier family 35, member C2##AK300207|SLC35C2|51006|solute carrier family 35, member C2##AK315726|SLC35C2|51006|solute carrier family 35, member C2##NM_015945|SLC35C2|51006|solute carrier family 35, member C2##NM_173073|SLC35C2|51006|solute carrier family 35, member C2##NM_173179|SLC35C2|51006|solute carrier family 35, member C2	0.392715	CTCF.p2:-7:0.393
chr4	26326955	26327072	reg1016921.p2	7.929	+	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	-4331	+	TSC_hg19_v1_chr4_+_26322635 AK302230	-4377	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	-4704	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	164972	-	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	258667	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	535527	+	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2	0.010642	
chr10	11824892	11825073	reg1017925.p1	7.928	+	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	-40584	+	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	-171346	-	NM_001080491	-250709	-	TSC_hg19_v1_chr10_+_11865354 BC017269 BC048800 NM_153256	40376	+	AK056703 TSC_hg19_v1_chr10_-_11936707	111720	-	TSC_hg19_v1_chr10_-_12084777 BC054011 AK310925 BC114964 BC115737 BC090919 NM_015542 AF318574 AF301013 AK096191	259826	-	NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_001080491|USP6NL|9712|USP6 N-terminal like##BC017269|C10orf47|254427|chromosome 10 open reading frame 47##BC048800|C10orf47|254427|chromosome 10 open reading frame 47##NM_153256|C10orf47|254427|chromosome 10 open reading frame 47##AK056703|LOC219731|219731|uncharacterized LOC219731##AK310925|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC114964|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC115737|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC090919|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##NM_015542|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AF318574|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AF301013|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AK096191|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)	0.995979	CTCF.p2:2:0.996
chr12	78319581	78319761	reg1000406.p2	7.928	+	NM_014903 AJ488201	-94539	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-860382	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-1046888	-	AK094616 NM_001135805	938101	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	938804	+	TSC_hg19_v1_chr12_+_79258517 BX647240	938865	+	NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I##BX647240|SYT1|6857|synaptotagmin I	0.955509	CTCF.p2:29:0.956
chr17	19300907	19301028	reg1016807.p2	7.927	+	L38486 TSC_hg19_v1_chr17_-_19290504 BC047725 AK293056 AK304528 NM_001198695 NM_002404	-10466	-	TSC_hg19_v1_chr17_+_19282061 AY534741 AB527827 HQ257997	-18832	+	TSC_hg19_v1_chr17_+_19281800 NM_002749 NM_139034 U29726 BC030134 AB209611 BC009963 U25278	-19144	+	AK309372 NM_007148 AK313844 AK226052 BC038896 BC053989 AB026054 AB590107 EU446727	13637	+	AK301854 TSC_hg19_v1_chr17_+_19437179 AK222625 AK001709 AK302620 NM_018242 BC022390 AK225360 BC010661 BC058882 BC050592 CU691318	136227	+	U46689 TSC_hg19_v1_chr17_+_19552087 NM_000382 NM_001031806 AK292381 L47162 AK025677 AK315096 BC002430 DQ895880 EU176377 CR457422 AB208894	251176	+	L38486|MFAP4|4239|microfibrillar-associated protein 4##BC047725|MFAP4|4239|microfibrillar-associated protein 4##AK293056|MFAP4|4239|microfibrillar-associated protein 4##AK304528|MFAP4|4239|microfibrillar-associated protein 4##NM_001198695|MFAP4|4239|microfibrillar-associated protein 4##NM_002404|MFAP4|4239|microfibrillar-associated protein 4##AY534741|MAPK7|5598|mitogen-activated protein kinase 7##HQ257997|MAPK7|5598|mitogen-activated protein kinase 7##NM_002749|MAPK7|5598|mitogen-activated protein kinase 7##NM_139034|MAPK7|5598|mitogen-activated protein kinase 7##U29726|MAPK7|5598|mitogen-activated protein kinase 7##BC030134|MAPK7|5598|mitogen-activated protein kinase 7##AB209611|MAPK7|5598|mitogen-activated protein kinase 7##BC009963|MAPK7|5598|mitogen-activated protein kinase 7##U25278|MAPK7|5598|mitogen-activated protein kinase 7##AK309372|RNF112|7732|ring finger protein 112##NM_007148|RNF112|7732|ring finger protein 112##AK313844|RNF112|7732|ring finger protein 112##AK226052|RNF112|7732|ring finger protein 112##BC038896|RNF112|7732|ring finger protein 112##BC053989|RNF112|7732|ring finger protein 112##AB026054|RNF112|7732|ring finger protein 112##EU446727|RNF112|7732|ring finger protein 112##AK301854|SLC47A1|55244|solute carrier family 47, member 1##AK222625|SLC47A1|55244|solute carrier family 47, member 1##AK001709|SLC47A1|55244|solute carrier family 47, member 1##AK302620|SLC47A1|55244|solute carrier family 47, member 1##NM_018242|SLC47A1|55244|solute carrier family 47, member 1##AK225360|SLC47A1|55244|solute carrier family 47, member 1##BC010661|SLC47A1|55244|solute carrier family 47, member 1##BC058882|SLC47A1|55244|solute carrier family 47, member 1##BC050592|SLC47A1|55244|solute carrier family 47, member 1##U46689|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_000382|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_001031806|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK292381|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##L47162|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK025677|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK315096|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC002430|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##DQ895880|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##EU176377|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##CR457422|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AB208894|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2	0.416435	CTCF.p2:-15:0.376
chr15	33228623	33228749	reg1017450.p1	7.926	+	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-217520	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-218429	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	-294772	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	131549	-	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	374483	+	TSC_hg19_v1_chr15_-_34212524 BC037796	983872	-	AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3	0.0	
chr9	131057723	131057884	reg1018393.p1	7.926	+	BC029911 AK311408 TSC_hg19_v1_chr9_+_131038571	-19268	+	TSC_hg19_v1_chr9_+_131038421 DQ414820 NM_001040011	-19381	+	TSC_hg19_v1_chr9_-_131038221 BX647920 AF248953 CU686726 BC069268 NM_004486	-19536	-	AK301986 TSC_hg19_v1_chr9_-_131084721 CU674714 DQ892156 DQ895351 AJ420462 AK001956 NM_015679 AF131848 BC001457	26841	-	TSC_hg19_v1_chr9_+_131084763 NM_016035 AK313650 EU216419 AF151850 AK025376 EU216420	27047	+	EU216421 TSC_hg19_v1_chr9_+_131085114 AK126646 EU216422 BC011895 AK301333 AB528109 AM392657 EU216423	27361	+	BC029911|SWI5|375757|SWI5 recombination repair homolog (yeast)##AK311408|SWI5|375757|SWI5 recombination repair homolog (yeast)##DQ414820|SWI5|375757|SWI5 recombination repair homolog (yeast)##NM_001040011|SWI5|375757|SWI5 recombination repair homolog (yeast)##BX647920|GOLGA2|2801|golgin A2##AF248953|GOLGA2|2801|golgin A2##BC069268|GOLGA2|2801|golgin A2##NM_004486|GOLGA2|2801|golgin A2##AK301986|TRUB2|26995|TruB pseudouridine (psi) synthase homolog 2 (E. coli)##DQ892156|TRUB2|26995|TruB pseudouridine (psi) synthase homolog 2 (E. coli)##DQ895351|TRUB2|26995|TruB pseudouridine (psi) synthase homolog 2 (E. coli)##AJ420462|TRUB2|26995|TruB pseudouridine (psi) synthase homolog 2 (E. coli)##AK001956|TRUB2|26995|TruB pseudouridine (psi) synthase homolog 2 (E. coli)##NM_015679|TRUB2|26995|TruB pseudouridine (psi) synthase homolog 2 (E. coli)##AF131848|TRUB2|26995|TruB pseudouridine (psi) synthase homolog 2 (E. coli)##BC001457|TRUB2|26995|TruB pseudouridine (psi) synthase homolog 2 (E. coli)##NM_016035|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##AK313650|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##EU216419|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##AF151850|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##AK025376|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##EU216420|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##EU216421|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##AK126646|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##EU216422|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##BC011895|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##AK301333|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##AM392657|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##EU216423|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)	0.977088	CTCF.p2:-11:0.977
chr9	136114601	136114720	reg1017839.p2	7.926	+	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	-30040	-	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	-75363	-	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	-89974	-	AF134412 AF134413 AF134414 AF134415 AF134416 BC069595 BC069605 BC069814 BC111575 DQ139865 FR691751 FR691752 J05175 JN791441 CU686922 AK302203 TSC_hg19_v1_chr9_-_136150618	35954	-	NM_020469 TSC_hg19_v1_chr9_-_136150638	35977	-	BC003001 BC006197 EU831789 EU831867 TSC_hg19_v1_chr9_-_136203015 BC014878	88340	-	BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B##AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF134412|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134413|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134414|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134415|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134416|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069595|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069605|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069814|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC111575|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##DQ139865|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691751|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691752|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##J05175|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##JN791441|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AK302203|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##NM_020469|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC003001|SURF6|6838|surfeit 6##BC006197|SURF6|6838|surfeit 6##EU831789|SURF6|6838|surfeit 6##EU831867|SURF6|6838|surfeit 6##BC014878|SURF6|6838|surfeit 6	0.978109	CTCF.p2:-10:0.978
chr9	36798369	36798517	reg1018032.p1	7.926	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-225519	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-397268	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-397546	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	235973	-	TSC_hg19_v1_chr9_+_37079908 AK091718	281463	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	281565	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.963556	CTCF.p2:-8:0.964
chrX	26801764	26801877	reg1017711.p1	7.926	+	AK097561 BC067286 NM_173523	-591264	+	NM_173699 BC029525 AK057361	-645334	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-1767747	-	BC157859 NM_001136533	963105	+	AK057527 NM_182506 BC101307 BC101309 BC101310	1024295	+	AK128123 NM_001017930	1197745	-	AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##NM_139058|ARX|170302|aristaless related homeobox##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	0.966607	CTCF.p2:-26:0.967
chr3	39419707	39419852	reg1017113.p2	7.925	+	AK314957 NM_005201 AF005210 BC107152 BC107159 D49919 BC074743	-48534	+	TSC_hg19_v1_chr3_-_39323217 AB464486 NM_001171174	-96572	-	NM_001171171	-97016	-	TSC_hg19_v1_chr3_+_39424860 NM_017875 AK000558 AK225388 BC013194 CR457242	5211	+	BC070263 NM_002295 TSC_hg19_v1_chr3_+_39448210 BC066941 BC107567 BC005391 BC062714 D28372 AF503367 BC013827 BC050688 X15005 BC034537 BC053370 BC071968 BC010418 BC071693 BC018867 BC071969 BC073863	28431	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	29363	+	AK314957|CCR8|1237|chemokine (C-C motif) receptor 8##NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8##AF005210|CCR8|1237|chemokine (C-C motif) receptor 8##BC107152|CCR8|1237|chemokine (C-C motif) receptor 8##BC107159|CCR8|1237|chemokine (C-C motif) receptor 8##D49919|CCR8|1237|chemokine (C-C motif) receptor 8##BC074743|CCR8|1237|chemokine (C-C motif) receptor 8##NM_001171174|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171171|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_017875|SLC25A38|54977|solute carrier family 25, member 38##AK000558|SLC25A38|54977|solute carrier family 25, member 38##AK225388|SLC25A38|54977|solute carrier family 25, member 38##BC013194|SLC25A38|54977|solute carrier family 25, member 38##CR457242|SLC25A38|54977|solute carrier family 25, member 38##BC070263|RPSA|3921|ribosomal protein SA##NM_002295|RPSA|3921|ribosomal protein SA##BC066941|RPSA|3921|ribosomal protein SA##BC107567|RPSA|3921|ribosomal protein SA##BC005391|RPSA|3921|ribosomal protein SA##BC062714|RPSA|3921|ribosomal protein SA##AF503367|RPSA|3921|ribosomal protein SA##BC013827|RPSA|3921|ribosomal protein SA##BC050688|RPSA|3921|ribosomal protein SA##X15005|RPSA|3921|ribosomal protein SA##BC034537|RPSA|3921|ribosomal protein SA##BC053370|RPSA|3921|ribosomal protein SA##BC071968|RPSA|3921|ribosomal protein SA##BC010418|RPSA|3921|ribosomal protein SA##BC071693|RPSA|3921|ribosomal protein SA##BC018867|RPSA|3921|ribosomal protein SA##BC071969|RPSA|3921|ribosomal protein SA##BC073863|RPSA|3921|ribosomal protein SA##BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA	0.988893	CTCF.p2:5:0.989
chr17	20350336	20350465	reg1017845.p1	7.924	+	TSC_hg19_v1_chr17_+_20224469 BC036241	-125934	+	BC033618 TSC_hg19_v1_chr17_+_20108434 AK298601	-241966	+	TSC_hg19_v1_chr17_+_20059384 NM_001033554 NM_001033555 NM_001243438 AK301318 AK304186 AY816326 AY816327 BC021123 BC050058	-291066	+	BC105943 AK290263 NM_001042685 AK296659	20435	-	NM_001190790	132636	+	AK057473 TSC_hg19_v1_chr17_+_20771859 BC041488 EF565107	421405	+	BC036241|CCDC144C|348254|coiled-coil domain containing 144C##BC033618|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK298601|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033554|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033555|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001243438|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK301318|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK304186|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816326|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816327|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC021123|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC050058|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK290263|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001042685|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2	0.010647	
chr20	61605753	61605873	reg1017215.p1	7.924	+	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-21688	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-21783	+	TSC_hg19_v1_chr20_+_61569501 NM_017896 BC032120 AK299509 AK000609	-36357	+	BC137288 BC137308 NM_080606	32573	-	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	241710	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	261528	+	AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##NM_017896|C20orf11|54994|chromosome 20 open reading frame 11##BC032120|C20orf11|54994|chromosome 20 open reading frame 11##AK299509|C20orf11|54994|chromosome 20 open reading frame 11##AK000609|C20orf11|54994|chromosome 20 open reading frame 11##BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7	0.0	
chr2	178013739	178013892	reg1015645.p2	7.924	+	BC013438 TSC_hg19_v1_chr2_-_177502718	-511127	-	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-879576	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-960399	+	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	63659	+	AK311688 NM_001145412 NM_001145413	114756	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	115561	-	BC013438|LOC375295|375295|uncharacterized LOC375295##NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.988959	CTCF.p2:16:0.989
chr10	49714697	49714840	reg1020096.p1	7.923	+	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	-105096	+	TSC_hg19_v1_chr10_+_49514722 AK292523	-199982	+	CR749241 NM_001018071	-231842	-	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	98319	-	TSC_hg19_v1_chr10_-_49864302 AK055937	149537	-	TSC_hg19_v1_chr10_+_49892917 BC034937	178122	+	BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##AK292523|MAPK8|5599|mitogen-activated protein kinase 8##CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22##AK055937|ARHGAP22|58504|Rho GTPase activating protein 22##BC034937|WDFY4|57705|WDFY family member 4	1.212067	CTCF.p2:13:0.999	CTCF.p2:-73:0.213
chr3	111296757	111296882	reg1016820.p1	7.923	+	AK290719 AK315237 TSC_hg19_v1_chr3_+_111261063 AL833681 CU676690	-35752	+	NM_005816 NM_198196 TSC_hg19_v1_chr3_+_111260970 BC020749 BC027914	-35853	+	TSC_hg19_v1_chr3_+_110790825 AF282874 AK075105 NM_001243288	-505925	+	NM_024508	17362	-	AK056141 NM_001185106 NM_153268 TSC_hg19_v1_chr3_+_111393527	96706	+	AK296841 NM_001134437 TSC_hg19_v1_chr3_+_111451348 CR749654 AK307491	154526	+	AK290719|CD96|10225|CD96 molecule##AK315237|CD96|10225|CD96 molecule##AL833681|CD96|10225|CD96 molecule##NM_005816|CD96|10225|CD96 molecule##NM_198196|CD96|10225|CD96 molecule##BC020749|CD96|10225|CD96 molecule##BC027914|CD96|10225|CD96 molecule##AF282874|PVRL3|25945|poliovirus receptor-related 3##AK075105|PVRL3|25945|poliovirus receptor-related 3##NM_001243288|PVRL3|25945|poliovirus receptor-related 3##NM_024508|ZBED2|79413|zinc finger, BED-type containing 2##AK056141|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_001185106|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_153268|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##AK296841|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001134437|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##CR749654|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK307491|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	0.921165	CTCF.p2:-7:0.921
chr13	74328964	74329111	reg1017790.p1	7.922	+	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-695833	+	TSC_hg19_v1_chr13_+_73356270 NM_006346 AK309828 BC006009 BC008432 BC041806 BC051911 AY370776 AY375528	-972727	+	BC056143 TSC_hg19_v1_chr13_-_73356083 AK314715 BC038101 NM_001128226 NM_014953	-972831	-	AF161471 AF113122 NM_007249	378952	-	TSC_hg19_v1_chr13_-_74708425 AK291397	379359	-	CR749622 TSC_hg19_v1_chr13_-_75901948	1572885	-	AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_006346|PIBF1|10464|progesterone immunomodulatory binding factor 1##AK309828|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC006009|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC008432|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC041806|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC051911|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY370776|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY375528|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC056143|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AK314715|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##BC038101|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_001128226|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_014953|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK291397|KLF12|11278|Kruppel-like factor 12##CR749622|TBC1D4|9882|TBC1 domain family, member 4	0.99758	CTCF.p2:0:0.998
chr20	45376707	45376809	reg1018170.p2	7.922	+	AF248053 TSC_hg19_v1_chr20_+_45338287 AK055548 NM_030777 BC101657 BC113423 AK290961 AK315269 AF321240	-38521	+	TSC_hg19_v1_chr20_-_45318164 BC009727 AB017505 AB065434 NM_033550	-58537	-	TSC_hg19_v1_chr20_-_45318084 BC010637 BC035461 AB587589 AK096502 BC066309 BC019621 AK315182	-58791	-	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	146524	+	TSC_hg19_v1_chr20_+_45523505 BC008803	146750	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	146794	+	AF248053|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK055548|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##NM_030777|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC101657|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC113423|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK290961|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK315269|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AF321240|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC009727|TP53RK|112858|TP53 regulating kinase##AB017505|TP53RK|112858|TP53 regulating kinase##AB065434|TP53RK|112858|TP53 regulating kinase##NM_033550|TP53RK|112858|TP53 regulating kinase##BC010637|TP53RK|112858|TP53 regulating kinase##BC035461|TP53RK|112858|TP53 regulating kinase##AK096502|TP53RK|112858|TP53 regulating kinase##BC066309|TP53RK|112858|TP53 regulating kinase##BC019621|TP53RK|112858|TP53 regulating kinase##AK315182|TP53RK|112858|TP53 regulating kinase##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)	0.996492	CTCF.p2:4:0.996
chr4	112858639	112858773	reg1019054.p1	7.922	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1295428	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1300537	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-1314431	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	207908	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	294378	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	348295	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.399999	CTCF.p2:0:0.400
chr8	19786472	19786600	reg1019297.p1	7.922	+	TSC_hg19_v1_chr8_+_19674972 AK001431 AB590485	-111533	+	TSC_hg19_v1_chr8_+_19674936 NM_018142	-111615	+	AK314625 TSC_hg19_v1_chr8_-_19615422	-171119	-	NM_000237 S78266 TSC_hg19_v1_chr8_+_19796721	10116	+	TSC_hg19_v1_chr8_+_19796763 AK092286 AK290290 AK222464 AK312311 M15856 X54516	10233	+	X14390 TSC_hg19_v1_chr8_+_19796864 BC011353	10329	+	AK001431|INTS10|55174|integrator complex subunit 10##NM_018142|INTS10|55174|integrator complex subunit 10##AK314625|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_000237|LPL|4023|lipoprotein lipase##S78266|LPL|4023|lipoprotein lipase##AK092286|LPL|4023|lipoprotein lipase##AK290290|LPL|4023|lipoprotein lipase##AK222464|LPL|4023|lipoprotein lipase##AK312311|LPL|4023|lipoprotein lipase##M15856|LPL|4023|lipoprotein lipase##X54516|LPL|4023|lipoprotein lipase##X14390|LPL|4023|lipoprotein lipase##BC011353|LPL|4023|lipoprotein lipase	0.110927	
chr3	122018851	122018951	reg1017825.p1	7.921	+	NM_001178065 U20760	-115721	+	NM_000388 U20759	-116372	+	NM_006889 NM_176892 U04343	-222179	+	NM_005213 AK291308 BC010379 X05978 CR456914	25173	+	BC019231 BC109378 TSC_hg19_v1_chr3_-_122102079 BC054051 BC062725 NM_001017928	83176	-	NM_014367 AK026030 BC010896 BC015060 AF201944 AF107495 AF250321 TSC_hg19_v1_chr3_+_122103076 AK293994 AF191020	84167	+	NM_001178065|CASR|846|calcium-sensing receptor##U20760|CASR|846|calcium-sensing receptor##NM_000388|CASR|846|calcium-sensing receptor##U20759|CASR|846|calcium-sensing receptor##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule##NM_005213|CSTA|1475|cystatin A (stefin A)##AK291308|CSTA|1475|cystatin A (stefin A)##BC010379|CSTA|1475|cystatin A (stefin A)##X05978|CSTA|1475|cystatin A (stefin A)##CR456914|CSTA|1475|cystatin A (stefin A)##BC109378|CCDC58|131076|coiled-coil domain containing 58##BC054051|CCDC58|131076|coiled-coil domain containing 58##BC062725|CCDC58|131076|coiled-coil domain containing 58##NM_001017928|CCDC58|131076|coiled-coil domain containing 58##NM_014367|FAM162A|26355|family with sequence similarity 162, member A##AK026030|FAM162A|26355|family with sequence similarity 162, member A##BC010896|FAM162A|26355|family with sequence similarity 162, member A##BC015060|FAM162A|26355|family with sequence similarity 162, member A##AF201944|FAM162A|26355|family with sequence similarity 162, member A##AF107495|FAM162A|26355|family with sequence similarity 162, member A##AF250321|FAM162A|26355|family with sequence similarity 162, member A##AK293994|FAM162A|26355|family with sequence similarity 162, member A##AF191020|FAM162A|26355|family with sequence similarity 162, member A	0.982571	CTCF.p2:0:0.983
chr8	49084822	49084941	reg1017632.p2	7.921	+	TSC_hg19_v1_chr8_+_48920990 BC016332 BC016710 BC007051 AK313447 U62136 AF049140 BC028673 BC062418 NM_003350	-163900	+	AK022899 TSC_hg19_v1_chr8_+_48873533 BC031061 AB590735	-211263	+	TSC_hg19_v1_chr8_+_48873513 AK296913	-211368	+	AK021829 BC025676 BC029586 AK316037 AK299659 AK307101 NM_001142857 NM_024593	562912	-	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	749029	-	NM_001007176 BC017981 AJ276240	900028	+	BC016332|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC016710|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC007051|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AK313447|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##U62136|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AF049140|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC028673|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC062418|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##NM_003350|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AK022899|MCM4|4173|minichromosome maintenance complex component 4##BC031061|MCM4|4173|minichromosome maintenance complex component 4##AK296913|MCM4|4173|minichromosome maintenance complex component 4##AK021829|EFCAB1|79645|EF-hand calcium binding domain 1##BC025676|EFCAB1|79645|EF-hand calcium binding domain 1##BC029586|EFCAB1|79645|EF-hand calcium binding domain 1##AK316037|EFCAB1|79645|EF-hand calcium binding domain 1##AK299659|EFCAB1|79645|EF-hand calcium binding domain 1##AK307101|EFCAB1|79645|EF-hand calcium binding domain 1##NM_001142857|EFCAB1|79645|EF-hand calcium binding domain 1##NM_024593|EFCAB1|79645|EF-hand calcium binding domain 1##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22	0.029657	
chrX	23801038	23801152	reg1014101.p1	7.921	+	TSC_hg19_v1_chrX_-_23761415 NM_001033583 NM_001037171	-39685	-	BX648512 AK000659 TSC_hg19_v1_chrX_-_23761394	-39704	-	AB528567 TSC_hg19_v1_chrX_-_23761366 BC136671 BC144360 BC144370 BC012573	-39777	-	NM_002970 TSC_hg19_v1_chrX_+_23801289 AK310078 BC008424 AK312162 AK310094 M77693 AL050290 BC002503 AK315888	217	+	TSC_hg19_v1_chrX_+_23801432 M55580 AY841998 AB464243 AM392717 BT006825 CR450294	354	+	TSC_hg19_v1_chrX_-_23855464 AK303908 D28399	54365	-	NM_001033583|ACOT9|23597|acyl-CoA thioesterase 9##NM_001037171|ACOT9|23597|acyl-CoA thioesterase 9##BX648512|ACOT9|23597|acyl-CoA thioesterase 9##AK000659|ACOT9|23597|acyl-CoA thioesterase 9##BC136671|ACOT9|23597|acyl-CoA thioesterase 9##BC144360|ACOT9|23597|acyl-CoA thioesterase 9##BC144370|ACOT9|23597|acyl-CoA thioesterase 9##BC012573|ACOT9|23597|acyl-CoA thioesterase 9##NM_002970|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK310078|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BC008424|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK312162|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##M77693|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AL050290|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BC002503|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK315888|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##M55580|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AY841998|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BT006825|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##CR450294|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK303908|RPL9|6133|ribosomal protein L9	0.997765	CTCF.p2:-12:0.998
chr7	106007589	106007746	reg1016214.p1	7.920	+	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	-82144	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	-82305	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	-254652	-	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	293836	-	TSC_hg19_v1_chr7_+_106505701 AK292684	498046	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	498107	+	BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1##AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74##AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	0.873387	CTCF.p2:5:0.873
chr15	98971673	98971852	reg1016714.p1	7.919	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	-467811	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	-467843	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	-1645090	+	AK097062 AK097062 NM_182562	85848	-	TSC_hg19_v1_chr15_+_99191767 AB425196	220209	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	220994	+	BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor	1.369202	CTCF.p2:1:0.583	CTCF.p2:-69:0.786
chr20	5186149	5186307	reg1020140.p1	7.919	+	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-78533	+	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	-78706	+	AK300558 AK311014 NM_002592	-79002	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	108808	-	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	405359	-	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	544838	+	AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK300558|PCNA|5111|proliferating cell nuclear antigen##NM_002592|PCNA|5111|proliferating cell nuclear antigen##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196	0.99851	CTCF.p2:-10:0.999
chr17	3438912	3439065	reg1017473.p2	7.918	+	NM_000049 S67156 BC029128 BC010941 CR541908 CU688602 DQ892079 DQ895272	-59614	+	AK312901 NM_001128085	-61614	+	AK301892 AY035868 NM_032598 NM_001170699 AF367472 AY035867 AY032684 BC029483 NM_001170698 NM_001170697 NM_001170695 NM_001170696	-63902	-	AF514998 BC104866 BC104868 BC143294 BC143295 BC143299 BC143330 BC143333 BC143334 BC143336 AY118267 AY118268 AK092557 TSC_hg19_v1_chr17_-_3461110	22082	-	AJ487035 NM_145068	22300	-	BC132820 BC136633 AJ277028 NM_080706	57158	-	NM_000049|ASPA|443|aspartoacylase##S67156|ASPA|443|aspartoacylase##BC029128|ASPA|443|aspartoacylase##BC010941|ASPA|443|aspartoacylase##CR541908|ASPA|443|aspartoacylase##DQ892079|ASPA|443|aspartoacylase##DQ895272|ASPA|443|aspartoacylase##AK312901|ASPA|443|aspartoacylase##NM_001128085|ASPA|443|aspartoacylase##AK301892|SPATA22|84690|spermatogenesis associated 22##AY035868|SPATA22|84690|spermatogenesis associated 22##NM_032598|SPATA22|84690|spermatogenesis associated 22##NM_001170699|SPATA22|84690|spermatogenesis associated 22##AF367472|SPATA22|84690|spermatogenesis associated 22##AY035867|SPATA22|84690|spermatogenesis associated 22##AY032684|SPATA22|84690|spermatogenesis associated 22##BC029483|SPATA22|84690|spermatogenesis associated 22##NM_001170698|SPATA22|84690|spermatogenesis associated 22##NM_001170697|SPATA22|84690|spermatogenesis associated 22##NM_001170695|SPATA22|84690|spermatogenesis associated 22##NM_001170696|SPATA22|84690|spermatogenesis associated 22##AF514998|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC104866|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC104868|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143294|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143295|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143299|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143330|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143333|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143334|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143336|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##AY118267|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##AY118268|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##AJ487035|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##NM_145068|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC132820|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##BC136633|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##AJ277028|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##NM_080706|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1	0.013479	
chr3	55539228	55539325	reg1015381.p1	7.918	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-17658	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-17944	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-23868	-	BC111550 BC112391 AB002376 NM_015576	963101	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	1051926	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	1051970	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.965395	CTCF.p2:-5:0.965
chr1	67191856	67191961	reg1016350.p1	7.917	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	-192024	+	TSC_hg19_v1_chr1_+_66798096 AK294441	-393813	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	-394055	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	26216	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	26257	+	BC101646 BC101648 AF133816 AY359030 NM_005478	75027	-	AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1##BC101646|INSL5|10022|insulin-like 5##BC101648|INSL5|10022|insulin-like 5##AF133816|INSL5|10022|insulin-like 5##AY359030|INSL5|10022|insulin-like 5##NM_005478|INSL5|10022|insulin-like 5	0.994727	CTCF.p2:18:0.995
chr20	61882854	61882958	reg1015126.p2	7.917	+	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	-15565	+	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	-35383	-	BC137288 BC137308 NM_080606	-244520	-	TSC_hg19_v1_chr20_-_61884664 AK308958	1827	-	CU692040 AK126246 TSC_hg19_v1_chr20_-_61885841 BC041812 NM_152864	2940	-	TSC_hg19_v1_chr20_+_61904146 AK308161	21240	+	AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4##AK126246|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4##BC041812|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4##NM_152864|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4##AK308161|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1	0.830069	CTCF.p2:8:0.830
chr9	46932360	46932478	reg1018360.p1	7.917	+	TSC_hg19_v1_chr9_+_45441926 BC006438	-1490493	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-3247576	+	NM_001145196	-3301690	-	BC040528 NM_001113541 NM_015667	18577190	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	19524882	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	19526077	-	BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.172335	
chr4	31676088	31676190	reg1016545.p1	7.916	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-953680	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-953945	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-954140	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	4569898	-	AK131492 NM_001136536 AK304357 AK316523	4607107	+	BC157885 NM_001170700	4609504	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.0	
chr11	40152104	40152245	reg1018262.p1	7.915	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-3532372	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-3536070	+	NM_000448 M29474	-3562606	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	162420	-	AB046800 NM_020929	163489	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	3181344	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.755121	CTCF.p2:-24:0.740
chr4	64394450	64394580	reg1017534.p2	7.915	+	NM_015236	-2031677	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-2327540	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-6417947	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	880581	-	AK307826 NM_004439 NM_182472	2141137	-	TSC_hg19_v1_chr4_-_66536182 AB209375	2141682	-	NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.992679	CTCF.p2:0:0.993
chr19	41860004	41860109	reg1015526.p1	7.914	+	NM_000660 TSC_hg19_v1_chr19_-_41859831	-225	-	TSC_hg19_v1_chr19_-_41859800 X02812	-263	-	TSC_hg19_v1_chr19_-_41859522 AK307742	-536	-	TSC_hg19_v1_chr19_+_41869851 NM_001098825	9803	+	TSC_hg19_v1_chr19_-_41870052 BC004157 BC004444 NM_030578	9983	-	NM_001098821 NM_001098822 NM_001098823 NM_001098824	22381	+	NM_000660|TGFB1|7040|transforming growth factor, beta 1##X02812|TGFB1|7040|transforming growth factor, beta 1##AK307742|TGFB1|7040|transforming growth factor, beta 1##NM_001098825|TMEM91|641649|transmembrane protein 91##BC004157|B9D2|80776|B9 protein domain 2##BC004444|B9D2|80776|B9 protein domain 2##NM_030578|B9D2|80776|B9 protein domain 2##NM_001098821|TMEM91|641649|transmembrane protein 91##NM_001098822|TMEM91|641649|transmembrane protein 91##NM_001098823|TMEM91|641649|transmembrane protein 91##NM_001098824|TMEM91|641649|transmembrane protein 91	0.971411	CTCF.p2:-11:0.971
chr3	190529726	190529842	reg1018063.p1	7.914	+	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	-297907	+	CU687168 BC071780 AY358607 NM_207316	-362154	-	AK314955 NM_006580	-424124	+	NM_001146686	50680	-	AY398681 AY573933 BC128106 BC128107 NM_198184	400537	+	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	517382	+	NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207##AK314955|CLDN16|10686|claudin 16##NM_006580|CLDN16|10686|claudin 16##NM_001146686|GMNC|647309|geminin coiled-coil domain containing##AY398681|OSTN|344901|osteocrin##AY573933|OSTN|344901|osteocrin##BC128106|OSTN|344901|osteocrin##BC128107|OSTN|344901|osteocrin##NM_198184|OSTN|344901|osteocrin##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50	0.983864	CTCF.p2:-7:0.984
chr5	76011867	76011991	reg1015182.p2	7.914	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	-92784	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	-312813	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-632658	+	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	27	+	NM_005242 BC018130 TSC_hg19_v1_chr5_+_76114854 U34038	102923	+	TSC_hg19_v1_chr5_+_76114883 BC012453 AY336105 BT009856 CU676194 CU680330 DQ890966 DQ894139	103015	+	BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor##NM_005242|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC018130|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##U34038|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC012453|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##AY336105|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BT009856|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ890966|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ894139|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1	0.086133	
chr17	53131327	53131467	reg1019492.p1	7.913	+	TSC_hg19_v1_chr17_+_53046125 AK122865 NM_178509 BC125116 BC041485	-85270	+	TSC_hg19_v1_chr17_-_53046016 AK293851 CR541837 DQ893136 DQ896418 AF044321 BC005895 AK295381 NM_001162861 NM_001162862 NM_004375	-85380	-	TSC_hg19_v1_chr17_+_52978217 NM_005486 AK001893 AK309164 AK225351 AJ010071 AK303912 AK300823 AK303913 AK315039 AK315907 AK223125 BC029396 AB590855	-153241	+	NM_002126 TSC_hg19_v1_chr17_+_53342320	210935	+	TSC_hg19_v1_chr17_+_53342370 BC036093 M95585	211044	+	AK290043 TSC_hg19_v1_chr17_+_53343204	211790	+	AK122865|STXBP4|252983|syntaxin binding protein 4##NM_178509|STXBP4|252983|syntaxin binding protein 4##BC125116|STXBP4|252983|syntaxin binding protein 4##BC041485|STXBP4|252983|syntaxin binding protein 4##AK293851|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##CR541837|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##DQ893136|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##DQ896418|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AF044321|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##BC005895|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AK295381|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_001162861|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_001162862|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_004375|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1##AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1##AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1##AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1##AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1##AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1##AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1##BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1##NM_002126|HLF|3131|hepatic leukemia factor##BC036093|HLF|3131|hepatic leukemia factor##M95585|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor	0.0	
chr19	45989107	45989230	reg1016958.p2	7.913	+	TSC_hg19_v1_chr19_+_45971253 EU178109 EU178110 EU178111 EU178112 EU178113 EU178114 EU178115 EU178116 L49169 NM_001114171 NM_006732 AK097324 AK225070 BC051767 BC036724 BC063042	-17899	+	TSC_hg19_v1_chr19_-_45927176 NM_001166049 NM_001983	-61993	-	TSC_hg19_v1_chr19_-_45927167 AF433652 AF001925 M13194 M28650	-62011	-	AF004224 TSC_hg19_v1_chr19_-_45996506 NM_206901	7325	-	TSC_hg19_v1_chr19_-_46000271 AF004222 BC014244 BC073874 AK291967 NM_005619 NM_206900	11079	-	NM_001080401 AK097444 TSC_hg19_v1_chr19_+_46001873 BC028228	12674	+	EU178109|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178110|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178111|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178112|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178113|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178114|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178115|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178116|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##L49169|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_001114171|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_006732|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##AK225070|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##BC036724|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##BC063042|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_001166049|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##NM_001983|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AF433652|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AF001925|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##M13194|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##M28650|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AF004224|RTN2|6253|reticulon 2##NM_206901|RTN2|6253|reticulon 2##AF004222|RTN2|6253|reticulon 2##BC014244|RTN2|6253|reticulon 2##BC073874|RTN2|6253|reticulon 2##AK291967|RTN2|6253|reticulon 2##NM_005619|RTN2|6253|reticulon 2##NM_206900|RTN2|6253|reticulon 2##NM_001080401|PPM1N|147699|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)##AK097444|PPM1N|147699|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)##BC028228|PPM1N|147699|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)	0.887288	CTCF.p2:2:0.887
chr4	175240453	175240571	reg1016878.p2	7.913	+	BC014903 NM_012180 AK123740	-35105	-	TSC_hg19_v1_chr4_+_175205073 NM_001145314 BC038667 AB051499 AK094961 AK292484	-35399	+	NM_001040157 TSC_hg19_v1_chr4_+_175204877	-35652	+	U63296 X82460 BC007691 BC018986 J05594 L76465 AK058013 AK300940 AK314624 AK300125 TSC_hg19_v1_chr4_-_175443639	203108	-	AK300524 NM_000860 NM_001145816	203279	-	U93917 BC036086 NM_001042543 NM_006529	509908	-	BC014903|FBXO8|26269|F-box protein 8##NM_012180|FBXO8|26269|F-box protein 8##AK123740|FBXO8|26269|F-box protein 8##NM_001145314|CEP44|80817|centrosomal protein 44kDa##BC038667|CEP44|80817|centrosomal protein 44kDa##AB051499|CEP44|80817|centrosomal protein 44kDa##AK094961|CEP44|80817|centrosomal protein 44kDa##AK292484|CEP44|80817|centrosomal protein 44kDa##NM_001040157|CEP44|80817|centrosomal protein 44kDa##U63296|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##X82460|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC007691|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC018986|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##J05594|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##L76465|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK058013|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300940|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK314624|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300125|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##U93917|GLRA3|8001|glycine receptor, alpha 3##BC036086|GLRA3|8001|glycine receptor, alpha 3##NM_001042543|GLRA3|8001|glycine receptor, alpha 3##NM_006529|GLRA3|8001|glycine receptor, alpha 3	0.988422	CTCF.p2:6:0.988
chr6	150186182	150186316	reg1018332.p1	7.913	+	TSC_hg19_v1_chr6_-_150185496 BC025239 BC043141 NM_032832	-806	-	AK027641 AK223134 TSC_hg19_v1_chr6_-_150185169	-1059	-	TSC_hg19_v1_chr6_+_150070878 AK289724 BC007501 D13892 AK304532 AK129778 BC008748 D25545 D25546 D25547 M93008 CU675673	-115303	+	AY054974 AY176317 AY252119 EF489426 AF359243 BC101976 BC103694 AY069961 NM_001243325 NM_001243327 NM_139165	25853	-	AY359075 NM_001243328	30945	-	AY172580 BC096719 BC098152 AY172579 NM_001001788 AK310157	57951	-	BC025239|LRP11|84918|low density lipoprotein receptor-related protein 11##BC043141|LRP11|84918|low density lipoprotein receptor-related protein 11##NM_032832|LRP11|84918|low density lipoprotein receptor-related protein 11##AK027641|LRP11|84918|low density lipoprotein receptor-related protein 11##AK223134|LRP11|84918|low density lipoprotein receptor-related protein 11##AK289724|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##BC007501|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D13892|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK304532|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK129778|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##BC008748|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D25545|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D25546|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D25547|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##M93008|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AY054974|RAET1E|135250|retinoic acid early transcript 1E##AY176317|RAET1E|135250|retinoic acid early transcript 1E##AY252119|RAET1E|135250|retinoic acid early transcript 1E##EF489426|RAET1E|135250|retinoic acid early transcript 1E##AF359243|RAET1E|135250|retinoic acid early transcript 1E##BC101976|RAET1E|135250|retinoic acid early transcript 1E##BC103694|RAET1E|135250|retinoic acid early transcript 1E##AY069961|RAET1E|135250|retinoic acid early transcript 1E##NM_001243325|RAET1E|135250|retinoic acid early transcript 1E##NM_001243327|RAET1E|135250|retinoic acid early transcript 1E##NM_139165|RAET1E|135250|retinoic acid early transcript 1E##AY359075|RAET1E|135250|retinoic acid early transcript 1E##NM_001243328|RAET1E|135250|retinoic acid early transcript 1E##AY172580|RAET1G|353091|retinoic acid early transcript 1G##BC096719|RAET1G|353091|retinoic acid early transcript 1G##BC098152|RAET1G|353091|retinoic acid early transcript 1G##AY172579|RAET1G|353091|retinoic acid early transcript 1G##NM_001001788|RAET1G|353091|retinoic acid early transcript 1G##AK310157|RAET1G|353091|retinoic acid early transcript 1G	0.0	
chr1	16333680	16333800	reg1018132.p1	7.911	+	AK127425 BC017946 NM_178840 CU676116	-2977	+	TSC_hg19_v1_chr1_-_16302597 BC126163 BC143965 BC143968 Y09723 AK302610 AK301896 AK309081 AK311083 AK315201 AK303823 AK299820 AK223618 AK294796 NM_001242884 NM_003443	-31270	-	TSC_hg19_v1_chr1_+_16259065 BC172907	-74629	+	TSC_hg19_v1_chr1_-_16344539 DQ892716 DQ895966 EU176383 EU831930 EU832025 AL832181 AF155908 AJ243191 CR749298 BX537990 AK075151 AK095911 CR749419	10773	-	AK057295 NM_014424	11544	-	BC053869 NM_001042704 NM_004070 AK298285 AK225550 AK290814 S80315	14713	+	AK127425|C1orf64|149563|chromosome 1 open reading frame 64##BC017946|C1orf64|149563|chromosome 1 open reading frame 64##NM_178840|C1orf64|149563|chromosome 1 open reading frame 64##BC126163|ZBTB17|7709|zinc finger and BTB domain containing 17##BC143965|ZBTB17|7709|zinc finger and BTB domain containing 17##BC143968|ZBTB17|7709|zinc finger and BTB domain containing 17##Y09723|ZBTB17|7709|zinc finger and BTB domain containing 17##AK302610|ZBTB17|7709|zinc finger and BTB domain containing 17##AK301896|ZBTB17|7709|zinc finger and BTB domain containing 17##AK309081|ZBTB17|7709|zinc finger and BTB domain containing 17##AK311083|ZBTB17|7709|zinc finger and BTB domain containing 17##AK315201|ZBTB17|7709|zinc finger and BTB domain containing 17##AK303823|ZBTB17|7709|zinc finger and BTB domain containing 17##AK299820|ZBTB17|7709|zinc finger and BTB domain containing 17##AK223618|ZBTB17|7709|zinc finger and BTB domain containing 17##AK294796|ZBTB17|7709|zinc finger and BTB domain containing 17##NM_001242884|ZBTB17|7709|zinc finger and BTB domain containing 17##NM_003443|ZBTB17|7709|zinc finger and BTB domain containing 17##DQ892716|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##DQ895966|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU176383|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU831930|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU832025|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AL832181|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AF155908|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AJ243191|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##CR749298|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##BX537990|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK075151|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK095911|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##CR749419|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK057295|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##NM_014424|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##BC053869|CLCNKA|1187|chloride channel Ka##NM_001042704|CLCNKA|1187|chloride channel Ka##NM_004070|CLCNKA|1187|chloride channel Ka##AK298285|CLCNKA|1187|chloride channel Ka##AK225550|CLCNKA|1187|chloride channel Ka##AK290814|CLCNKA|1187|chloride channel Ka##S80315|CLCNKB|1188|chloride channel Kb	0.252427	CTCF.p2:-5:0.252
chr7	74785653	74785797	reg1019544.p1	7.911	+	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	-277351	+	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	-296033	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	-296087	-	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	81795	-	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	202845	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	239240	+	NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73	0.96233	CTCF.p2:5:0.962
chr3	87132075	87132189	reg1014835.p1	7.910	+	BC094780 TSC_hg19_v1_chr3_-_87040272	-91862	-	TSC_hg19_v1_chr3_-_87040249 NM_016206	-91881	-	AF538973 NM_153184	-1356501	+	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	144403	+	AB587506 L18781 X72215 X62429 D10216 NM_000306 NM_001122757	193541	-	NM_000866	899593	+	BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B##L18781|POU1F1|5449|POU class 1 homeobox 1##X72215|POU1F1|5449|POU class 1 homeobox 1##X62429|POU1F1|5449|POU class 1 homeobox 1##D10216|POU1F1|5449|POU class 1 homeobox 1##NM_000306|POU1F1|5449|POU class 1 homeobox 1##NM_001122757|POU1F1|5449|POU class 1 homeobox 1##NM_000866|HTR1F|3355|5-hydroxytryptamine (serotonin) receptor 1F	0.994816	CTCF.p2:13:0.995
chr4	12731148	12731277	reg1017660.p2	7.910	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-1300680	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-2044811	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-2272202	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	754739	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	754763	-	AB463932 AF009801 EU446467 BC111966 NM_001189	814863	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.998354	CTCF.p2:-32:0.998
chr10	126222922	126223040	reg1017960.p1	7.909	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-72560	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-84404	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-115463	-	D50930 TSC_hg19_v1_chr10_-_126432660	209663	-	TSC_hg19_v1_chr10_-_126432823 BC031654	209835	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	209930	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.155127	
chr2	241172445	241172554	reg1017053.p2	7.909	+	NM_148961	-92427	-	TSC_hg19_v1_chr2_-_241075721 AF487338 BC033955 NM_001163424 AF453951 NM_138336 AB463905	-96766	-	NM_173351	-187011	-	TSC_hg19_v1_chr2_+_241375079 BC051279 NM_002081 X54232	202581	+	TSC_hg19_v1_chr2_+_241375207 BC027997	202712	+	TSC_hg19_v1_chr2_+_241375269 AK223516 BC045712	202766	+	NM_148961|OTOS|150677|otospiralin##AF487338|MYEOV2|150678|myeloma overexpressed 2##BC033955|MYEOV2|150678|myeloma overexpressed 2##NM_001163424|MYEOV2|150678|myeloma overexpressed 2##AF453951|MYEOV2|150678|myeloma overexpressed 2##NM_138336|MYEOV2|150678|myeloma overexpressed 2##NM_173351|OR6B3|150681|olfactory receptor, family 6, subfamily B, member 3##BC051279|GPC1|2817|glypican 1##NM_002081|GPC1|2817|glypican 1##X54232|GPC1|2817|glypican 1##BC027997|GPC1|2817|glypican 1##AK223516|GPC1|2817|glypican 1##BC045712|GPC1|2817|glypican 1	0.994891	CTCF.p2:-18:0.995
chr7	33463354	33463504	reg1018146.p1	7.909	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-294348	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-314452	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-361107	-	AK289963 NM_133468 AK096150 BC060868	481713	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	1234490	+	DQ287932 NM_015283	1614223	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	0.996044	CTCF.p2:-6:0.996
chr8	144397098	144397215	reg1016171.p1	7.909	+	TSC_hg19_v1_chr8_+_144373586 NM_030895 AK024191 BC126317	-23484	+	TSC_hg19_v1_chr8_+_144356708 AY129020	-40418	+	TSC_hg19_v1_chr8_+_144349624 NM_138465 BC014165	-47552	+	TSC_hg19_v1_chr8_-_144417034 AK303237 AK315913 AK308475 AK311647 BC071914 BC044646 BC052285	19859	-	AF349017 NM_052963 TSC_hg19_v1_chr8_-_144417051	19899	-	TSC_hg19_v1_chr8_+_144451016 NM_052924 BC012135 BC025767 AB528055 AY082588 CU693058 AB067516	53934	+	NM_030895|ZNF696|79943|zinc finger protein 696##AK024191|ZNF696|79943|zinc finger protein 696##BC126317|ZNF696|79943|zinc finger protein 696##AY129020|GLI4|2738|GLI family zinc finger 4##NM_138465|GLI4|2738|GLI family zinc finger 4##BC014165|GLI4|2738|GLI family zinc finger 4##AK303237|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK315913|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK308475|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK311647|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC071914|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC044646|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC052285|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AF349017|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_052963|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_052924|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC012135|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC025767|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AY082588|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AB067516|RHPN1|114822|rhophilin, Rho GTPase binding protein 1	0.830068	CTCF.p2:-8:0.830
chr11	74032645	74032786	reg1020260.p1	7.908	+	BC089446 TSC_hg19_v1_chr11_-_74022686 BC040582 AL833965 AY358521 AK300598 AY327887 BC117333 BC126170 AY313448 NM_182904	-10033	-	TSC_hg19_v1_chr11_+_73882440 AB385584 CU678344 DQ892348 DQ895778	-150260	+	TSC_hg19_v1_chr11_+_73882350 BC003046 BC050705 AK225647 AF157028 NM_016147 AK001381	-150372	+	TSC_hg19_v1_chr11_-_74109469 BC027950 AB019210 AK056591 BC059360 NM_173582	76775	-	CR936625 DQ192291 NM_005472	145881	-	TSC_hg19_v1_chr11_-_74204756 NM_001144869	172035	-	BC089446|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC040582|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AL833965|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY358521|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AK300598|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY327887|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC117333|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC126170|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY313448|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##NM_182904|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##DQ892348|PPME1|51400|protein phosphatase methylesterase 1##DQ895778|PPME1|51400|protein phosphatase methylesterase 1##BC003046|PPME1|51400|protein phosphatase methylesterase 1##BC050705|PPME1|51400|protein phosphatase methylesterase 1##AK225647|PPME1|51400|protein phosphatase methylesterase 1##AF157028|PPME1|51400|protein phosphatase methylesterase 1##NM_016147|PPME1|51400|protein phosphatase methylesterase 1##AK001381|PPME1|51400|protein phosphatase methylesterase 1##AB019210|PGM2L1|283209|phosphoglucomutase 2-like 1##AK056591|PGM2L1|283209|phosphoglucomutase 2-like 1##BC059360|PGM2L1|283209|phosphoglucomutase 2-like 1##NM_173582|PGM2L1|283209|phosphoglucomutase 2-like 1##CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_001144869|LIPT2|387787|lipoyl(octanoyl) transferase 2 (putative)	0.841271	CTCF.p2:4:0.841
chr3	154052828	154052965	reg1016929.p1	7.908	+	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	-10636	-	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	-213694	+	AK127282 NM_001251962	-214105	+	DQ318360 NM_001038705	94607	-	AK310664 NM_000902 BX647134	744553	+	TSC_hg19_v1_chr3_+_154797644 NM_007287	744778	+	AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##DQ318360|GPR149|344758|G protein-coupled receptor 149##NM_001038705|GPR149|344758|G protein-coupled receptor 149##AK310664|MME|4311|membrane metallo-endopeptidase##NM_000902|MME|4311|membrane metallo-endopeptidase##BX647134|MME|4311|membrane metallo-endopeptidase##NM_007287|MME|4311|membrane metallo-endopeptidase	0.980959	CTCF.p2:12:0.981
chr7	73617657	73617755	reg1018361.p1	7.908	+	TSC_hg19_v1_chr7_+_73588685 AK290676 BC066928 D26068 NM_022170 NM_031992 BC010021 BC021214 AB385268 DQ891924 DQ895111 DQ895112	-29003	+	TSC_hg19_v1_chr7_+_73588678 AK314749 AK297651	-29065	+	NM_001204426 TSC_hg19_v1_chr7_+_73507550 AK300382	-110189	+	NM_014146 NM_032463 NM_032464	6380	+	TSC_hg19_v1_chr7_+_73624283 BC001609 AK002099 BC006080	6576	+	TSC_hg19_v1_chr7_+_73624338 AF161531 AF252611 AF252612 AF252614 AK225150 AK290074 AK290916	6630	+	AK290676|EIF4H|7458|eukaryotic translation initiation factor 4H##BC066928|EIF4H|7458|eukaryotic translation initiation factor 4H##D26068|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_022170|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_031992|EIF4H|7458|eukaryotic translation initiation factor 4H##BC010021|EIF4H|7458|eukaryotic translation initiation factor 4H##BC021214|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ891924|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ895111|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ895112|EIF4H|7458|eukaryotic translation initiation factor 4H##AK314749|EIF4H|7458|eukaryotic translation initiation factor 4H##AK297651|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_001204426|LIMK1|3984|LIM domain kinase 1##AK300382|LIMK1|3984|LIM domain kinase 1##NM_014146|LAT2|7462|linker for activation of T cells family, member 2##NM_032463|LAT2|7462|linker for activation of T cells family, member 2##NM_032464|LAT2|7462|linker for activation of T cells family, member 2##BC001609|LAT2|7462|linker for activation of T cells family, member 2##AK002099|LAT2|7462|linker for activation of T cells family, member 2##BC006080|LAT2|7462|linker for activation of T cells family, member 2##AF161531|LAT2|7462|linker for activation of T cells family, member 2##AF252611|LAT2|7462|linker for activation of T cells family, member 2##AF252612|LAT2|7462|linker for activation of T cells family, member 2##AF252614|LAT2|7462|linker for activation of T cells family, member 2##AK225150|LAT2|7462|linker for activation of T cells family, member 2##AK290074|LAT2|7462|linker for activation of T cells family, member 2##AK290916|LAT2|7462|linker for activation of T cells family, member 2	0.0	
chr9	12329503	12329610	reg1015690.p1	7.908	+	BC028038 NM_002839	-1716834	-	TSC_hg19_v1_chr9_+_8858136 AK094342	-3471423	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-3595637	-	NM_000550 X51420 BC052608	363869	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	445460	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	446225	+	BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##HQ257895|C9orf150|286343|chromosome 9 open reading frame 150	0.957154	CTCF.p2:14:0.957
chr9	125987851	125988032	reg1018089.p2	7.908	+	TSC_hg19_v1_chr9_-_125941308 BC002693	-46621	-	TSC_hg19_v1_chr9_-_125874882 AK025814	-113042	-	AB384939 BC066885 BC066886 BC067532 BC067533 BC067534 CU688178 NM_005294	-191096	+	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	42879	-	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	42947	-	NM_173689 AK123000 DQ426866 AY720432	130552	+	BC002693|STRBP|55342|spermatid perinuclear RNA binding protein##AK025814|MIR600HG|81571|MIR600 host gene (non-protein coding)##BC066885|GPR21|2844|G protein-coupled receptor 21##BC066886|GPR21|2844|G protein-coupled receptor 21##BC067532|GPR21|2844|G protein-coupled receptor 21##BC067533|GPR21|2844|G protein-coupled receptor 21##BC067534|GPR21|2844|G protein-coupled receptor 21##NM_005294|GPR21|2844|G protein-coupled receptor 21##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein##AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)	0.38028	CTCF.p2:8:0.380
chr9	137581525	137581676	reg1018131.p1	7.908	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	-47790	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	-47953	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-363200	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	191060	+	D83920 DQ891426 DQ894436 CR749452 BC020635 AK314867 NM_002003	228157	-	NM_014279 NM_006334 TSC_hg19_v1_chr9_+_137967133	385515	+	D90279|COL5A1|1289|collagen, type V, alpha 1##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D83920|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ891426|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ894436|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##CR749452|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##BC020635|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##AK314867|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_002003|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_014279|OLFM1|10439|olfactomedin 1##NM_006334|OLFM1|10439|olfactomedin 1	0.928627	CTCF.p2:-2:0.929
chr20	37626475	37626603	reg1016267.p2	7.907	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-35550	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-71471	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-71550	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1691338	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	2030955	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	2031125	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.248085	CTCF.p2:11:0.248
chr5	142593391	142593572	reg1016650.p1	7.907	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-443173	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-443509	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-515910	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	189342	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	189625	-	BC015610 TSC_hg19_v1_chr5_-_142783214	189730	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.371854	CTCF.p2:-25:0.372
chr5	22889947	22890117	reg1016887.p1	7.907	+	L33477 NM_004061	-36302	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-36586	-	TSC_hg19_v1_chr5_-_22212879 AK314800	-677151	-	DQ388610 NM_020227 AK301776	617711	+	NM_006727	1755052	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	4148639	-	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	0.985792	CTCF.p2:-8:0.986
chr6	84324827	84324943	reg1016516.p1	7.907	+	TSC_hg19_v1_chr6_+_84222252 AY358661 BC037170 AK291928	-102605	+	NM_001170423 NM_153362 TSC_hg19_v1_chr6_+_84222226	-102675	+	TSC_hg19_v1_chr6_-_84140899 NM_002395	-183981	-	TSC_hg19_v1_chr6_-_84418505 AK294898	93614	-	TSC_hg19_v1_chr6_-_84418819 AB014556 AK289582 NM_001242792	93892	-	BC044579 TSC_hg19_v1_chr6_-_84419072 CR749348	94170	-	AY358661|PRSS35|167681|protease, serine, 35##BC037170|PRSS35|167681|protease, serine, 35##AK291928|PRSS35|167681|protease, serine, 35##NM_001170423|PRSS35|167681|protease, serine, 35##NM_153362|PRSS35|167681|protease, serine, 35##NM_002395|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK294898|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##AB014556|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##AK289582|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##NM_001242792|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##BC044579|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##CR749348|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)	0.849925	CTCF.p2:-11:0.850
chr1	206982979	206983086	reg1015614.p1	7.906	+	AY040367 NM_153758 AB463800	-10806	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-37153	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-124561	+	AF453946 NM_013371	19189	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	56143	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	87768	+	AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24	0.940655	CTCF.p2:-5:0.941
chr15	92625640	92625739	reg1016972.p2	7.906	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-228122	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	-228592	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	-228746	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	311510	+	AK057393 NM_153040	389217	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	573190	-	AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B	0.991446	CTCF.p2:-4:0.991
chr1	92775766	92775917	reg1017641.p1	7.906	+	BC039014 NM_024813 TSC_hg19_v1_chr1_+_92764615 AK023212 BC031070 AK225054 CU691638	-11266	+	TSC_hg19_v1_chr1_-_92764545 AJ302735 AJ347709 BC001257 AK295971 U73704 NM_053274	-11308	-	NM_001012425 BC130499 BC171742	-92266	+	AB463058 DQ891273 DQ894461 AB209606 BC074866 BC074867 TSC_hg19_v1_chr1_-_92949213	173288	-	AK313876 NM_001127215 TSC_hg19_v1_chr1_-_92949370	173538	-	TSC_hg19_v1_chr1_-_92949508 AK123009	173691	-	BC039014|RPAP2|79871|RNA polymerase II associated protein 2##NM_024813|RPAP2|79871|RNA polymerase II associated protein 2##AK023212|RPAP2|79871|RNA polymerase II associated protein 2##BC031070|RPAP2|79871|RNA polymerase II associated protein 2##AK225054|RPAP2|79871|RNA polymerase II associated protein 2##AJ302735|GLMN|11146|glomulin, FKBP associated protein##AJ347709|GLMN|11146|glomulin, FKBP associated protein##BC001257|GLMN|11146|glomulin, FKBP associated protein##AK295971|GLMN|11146|glomulin, FKBP associated protein##U73704|GLMN|11146|glomulin, FKBP associated protein##NM_053274|GLMN|11146|glomulin, FKBP associated protein##NM_001012425|C1orf146|388649|chromosome 1 open reading frame 146##BC130499|C1orf146|388649|chromosome 1 open reading frame 146##BC171742|C1orf146|388649|chromosome 1 open reading frame 146##DQ891273|GFI1|2672|growth factor independent 1 transcription repressor##DQ894461|GFI1|2672|growth factor independent 1 transcription repressor##AB209606|GFI1|2672|growth factor independent 1 transcription repressor##BC074866|GFI1|2672|growth factor independent 1 transcription repressor##BC074867|GFI1|2672|growth factor independent 1 transcription repressor##AK313876|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127215|GFI1|2672|growth factor independent 1 transcription repressor##AK123009|GFI1|2672|growth factor independent 1 transcription repressor	0.782881	CTCF.p2:1:0.783
chr6	70442649	70442830	reg1018009.p2	7.906	+	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	-1097338	+	AL833240 TSC_hg19_v1_chr6_-_69345026	-1097767	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	-1843711	-	TSC_hg19_v1_chr6_-_70506472 AB074281	63738	-	TSC_hg19_v1_chr6_-_70506524 AK290069	63789	-	AF113224 TSC_hg19_v1_chr6_-_70506799 BC010360 AK225537 AK002102 AK225187	64048	-	NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##AB074281|LMBRD1|55788|LMBR1 domain containing 1##AK290069|LMBRD1|55788|LMBR1 domain containing 1##AF113224|LMBRD1|55788|LMBR1 domain containing 1##BC010360|LMBRD1|55788|LMBR1 domain containing 1##AK225537|LMBRD1|55788|LMBR1 domain containing 1##AK002102|LMBRD1|55788|LMBR1 domain containing 1##AK225187|LMBRD1|55788|LMBR1 domain containing 1	0.940804	CTCF.p2:-7:0.941
chr12	29241656	29241810	reg1018285.p1	7.905	+	AY289196 NM_018318 AB587421	-831593	+	TSC_hg19_v1_chr12_+_28343404 BC035168	-898322	+	NM_002820 NM_198965	-1116818	-	AL136843 TSC_hg19_v1_chr12_+_29302210 AK001324 AK314670 BC018460	60459	+	TSC_hg19_v1_chr12_+_29376598 BC022267 NM_018099 AK027756 AK129857 AK001927	134938	+	TSC_hg19_v1_chr12_-_29534081 BC064522	292342	-	AY289196|CCDC91|55297|coiled-coil domain containing 91##NM_018318|CCDC91|55297|coiled-coil domain containing 91##NM_002820|PTHLH|5744|parathyroid hormone-like hormone##NM_198965|PTHLH|5744|parathyroid hormone-like hormone##AL136843|FAR2|55711|fatty acyl CoA reductase 2##AK001324|FAR2|55711|fatty acyl CoA reductase 2##AK314670|FAR2|55711|fatty acyl CoA reductase 2##BC022267|FAR2|55711|fatty acyl CoA reductase 2##NM_018099|FAR2|55711|fatty acyl CoA reductase 2##AK027756|FAR2|55711|fatty acyl CoA reductase 2##AK129857|FAR2|55711|fatty acyl CoA reductase 2##AK001927|FAR2|55711|fatty acyl CoA reductase 2##BC064522|ERGIC2|51290|ERGIC and golgi 2	0.0	
chr8	112976582	112976681	reg1017540.p2	7.904	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-1989665	-	NM_001099743 NM_001099744	-2272612	-	AK290469 NM_001099745 NM_001099746	-2283398	-	AB114605 NM_198124	1412750	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	1472498	-	TSC_hg19_v1_chr8_-_116680208 AK304046	3703589	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.851096	CTCF.p2:-8:0.851
chr11	124514361	124514482	reg1017163.p1	7.903	+	BC018452 TSC_hg19_v1_chr11_+_124492787 BC064392 BC032312 BC073160 BC109269 DQ144542	-21545	+	AK027527 AK057749 TSC_hg19_v1_chr11_+_124492770	-21651	+	TSC_hg19_v1_chr11_+_124492765 AK222936	-21658	+	AL137496 EU831959 CU691938 TSC_hg19_v1_chr11_-_124543619 AF303378 BC022456 AK056093 BC040966 BC068450 NM_170601	29266	-	AF334735 NM_017425 AK311806 AK307271 BC019224	29354	+	AF300796 NM_001199922	31777	-	BC018452|TBRG1|84897|transforming growth factor beta regulator 1##BC064392|TBRG1|84897|transforming growth factor beta regulator 1##BC032312|TBRG1|84897|transforming growth factor beta regulator 1##BC073160|TBRG1|84897|transforming growth factor beta regulator 1##BC109269|TBRG1|84897|transforming growth factor beta regulator 1##DQ144542|TBRG1|84897|transforming growth factor beta regulator 1##AK027527|TBRG1|84897|transforming growth factor beta regulator 1##AK057749|TBRG1|84897|transforming growth factor beta regulator 1##AK222936|TBRG1|84897|transforming growth factor beta regulator 1##AL137496|SIAE|54414|sialic acid acetylesterase##EU831959|SIAE|54414|sialic acid acetylesterase##AF303378|SIAE|54414|sialic acid acetylesterase##BC022456|SIAE|54414|sialic acid acetylesterase##AK056093|SIAE|54414|sialic acid acetylesterase##BC040966|SIAE|54414|sialic acid acetylesterase##BC068450|SIAE|54414|sialic acid acetylesterase##NM_170601|SIAE|54414|sialic acid acetylesterase##AF334735|SPA17|53340|sperm autoantigenic protein 17##NM_017425|SPA17|53340|sperm autoantigenic protein 17##AK311806|SPA17|53340|sperm autoantigenic protein 17##AK307271|SPA17|53340|sperm autoantigenic protein 17##BC019224|SPA17|53340|sperm autoantigenic protein 17##AF300796|SIAE|54414|sialic acid acetylesterase##NM_001199922|SIAE|54414|sialic acid acetylesterase	0.959098	CTCF.p2:-13:0.959
chr13	27954229	27954339	reg1016504.p1	7.903	+	TSC_hg19_v1_chr13_+_27844966 HQ258126	-109277	+	AY439004 NM_206827	-109821	+	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	-128542	+	BC143711 D32257 NM_002097 TSC_hg19_v1_chr13_+_27998761 AB590496 U14134 U20272	44487	+	TSC_hg19_v1_chr13_-_28024327 BC039599 NM_001166262 NM_001166261	70025	-	AF265440 TSC_hg19_v1_chr13_-_28024702 BC046166 NM_001166263 NM_152912	70438	-	HQ258126|RASL11A|387496|RAS-like, family 11, member A##AY439004|RASL11A|387496|RAS-like, family 11, member A##NM_206827|RASL11A|387496|RAS-like, family 11, member A##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21##BC143711|GTF3A|2971|general transcription factor IIIA##D32257|GTF3A|2971|general transcription factor IIIA##NM_002097|GTF3A|2971|general transcription factor IIIA##U14134|GTF3A|2971|general transcription factor IIIA##U20272|GTF3A|2971|general transcription factor IIIA##BC039599|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166262|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166261|MTIF3|219402|mitochondrial translational initiation factor 3##BC046166|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166263|MTIF3|219402|mitochondrial translational initiation factor 3##NM_152912|MTIF3|219402|mitochondrial translational initiation factor 3	0.020542	
chr6	157695842	157695980	reg1016320.p2	7.903	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-596036	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-596627	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-596686	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	48673	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	49306	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	106628	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	1.010642	CTCF.p2:-4:0.998
chr3	81267327	81267428	reg1013954.p1	7.902	+	NM_002941	-1450319	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-2198790	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-2600392	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	543320	-	TSC_hg19_v1_chr3_-_81810798 AK312245	543421	-	TSC_hg19_v1_chr3_-_81810802 AK297939	543428	-	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.0	
chr11	76432924	76433051	reg1017034.p2	7.901	+	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	-51178	-	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	-52019	-	TSC_hg19_v1_chr11_+_76156061 AK304043 BC033404 NM_020193 AK309621 BC021688 AK125114	-276884	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	61290	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	138945	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	139006	+	BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##AK304043|C11orf30|56946|chromosome 11 open reading frame 30##BC033404|C11orf30|56946|chromosome 11 open reading frame 30##NM_020193|C11orf30|56946|chromosome 11 open reading frame 30##AK309621|C11orf30|56946|chromosome 11 open reading frame 30##BC021688|C11orf30|56946|chromosome 11 open reading frame 30##AK125114|C11orf30|56946|chromosome 11 open reading frame 30##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3	0.04508	
chr18	43387310	43387416	reg1017949.p1	7.901	+	NM_001146037	-80446	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	-83206	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	-83259	+	AK172835 NM_213602 AY971516 AK290402 AK290400 AK095432	18261	+	AB046852 TSC_hg19_v1_chr18_-_43547294 NM_020964	159915	-	DQ893199 DQ893200 DQ893201 DQ893695 DQ896527 DQ896528 DQ896529 TSC_hg19_v1_chr18_-_43652247 BC035395 BC008216 NM_024430	264845	-	NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK172835|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_213602|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AY971516|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290402|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290400|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK095432|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AB046852|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##NM_020964|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##DQ893199|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893200|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893201|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893695|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896527|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896528|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896529|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##BC035395|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##NM_024430|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2	0.869245	CTCF.p2:5:0.869
chr6	83767558	83767691	reg1019068.p1	7.901	+	TSC_hg19_v1_chr6_+_83073996 AK074790 NM_001166392	-693647	+	TSC_hg19_v1_chr6_+_83073565 BC037161 AK074786	-694091	+	AK291170 NM_006670	-694702	+	TSC_hg19_v1_chr6_-_83775541 BC101512 BC101538 BC143617 BC036049 AB126062 NM_198920 BC053645 AK298205 BC057845	7901	-	TSC_hg19_v1_chr6_+_83777389 BX648667 NM_001199942 NM_015018 AK094766	9773	+	AF102265 AB032081 AF180371 TSC_hg19_v1_chr6_-_83902977 AK314512 AK225363 AK001365 AK023432 BC001258 NM_001199918 NM_001199919 NM_015599	135348	-	AK074790|TPBG|7162|trophoblast glycoprotein##NM_001166392|TPBG|7162|trophoblast glycoprotein##BC037161|TPBG|7162|trophoblast glycoprotein##AK074786|TPBG|7162|trophoblast glycoprotein##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein##BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BX648667|DOPEY1|23033|dopey family member 1##NM_001199942|DOPEY1|23033|dopey family member 1##NM_015018|DOPEY1|23033|dopey family member 1##AK094766|DOPEY1|23033|dopey family member 1##AF102265|PGM3|5238|phosphoglucomutase 3##AB032081|PGM3|5238|phosphoglucomutase 3##AF180371|PGM3|5238|phosphoglucomutase 3##AK314512|PGM3|5238|phosphoglucomutase 3##AK225363|PGM3|5238|phosphoglucomutase 3##AK001365|PGM3|5238|phosphoglucomutase 3##AK023432|PGM3|5238|phosphoglucomutase 3##BC001258|PGM3|5238|phosphoglucomutase 3##NM_001199918|PGM3|5238|phosphoglucomutase 3##NM_001199919|PGM3|5238|phosphoglucomutase 3##NM_015599|PGM3|5238|phosphoglucomutase 3	0.743158	CTCF.p2:17:0.743
chr7	99510894	99510997	reg1016623.p2	7.901	+	NM_001005276 BC137375 BC137376	-36278	-	AF337813 NM_022820 NM_057095 NM_057096 BC100981 BC100982 AF280108 AF280109 AF280110 AF280111 AF280112 AF280113 AF319634 AY390423 AY390424 AY390425 AY390426	-85259	+	AJ563375 AJ563376 AJ563377 AY606313 CU686796 DQ924960 AF182273 BC069352 BC069418 D00003 M13785 X12387 J04449 M14096 M18907 BC101631 TSC_hg19_v1_chr7_-_99381808 AK298451 AK312967 AK298462 NM_001202855 NM_017460	-129186	-	BC011763 BC025949 TSC_hg19_v1_chr7_-_99517121	6174	-	TSC_hg19_v1_chr7_-_99517144 AK293565	6193	-	TSC_hg19_v1_chr7_-_99517154 AF220023 AF220024 AK092892 AX747794 NM_033017 NM_033091	6250	-	NM_001005276|OR2AE1|81392|olfactory receptor, family 2, subfamily AE, member 1##BC137375|OR2AE1|81392|olfactory receptor, family 2, subfamily AE, member 1##BC137376|OR2AE1|81392|olfactory receptor, family 2, subfamily AE, member 1##AF337813|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##NM_022820|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##NM_057095|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##NM_057096|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##BC100981|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##BC100982|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280108|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280109|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280110|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280111|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280112|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280113|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF319634|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AY390423|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AY390424|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AY390425|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AY390426|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AJ563375|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AJ563376|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AJ563377|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AY606313|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##DQ924960|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AF182273|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##BC069352|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##BC069418|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##D00003|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##M13785|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##X12387|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##J04449|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##M14096|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##M18907|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##BC101631|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AK298451|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AK312967|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AK298462|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##NM_001202855|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##NM_017460|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##BC011763|TRIM4|89122|tripartite motif containing 4##BC025949|TRIM4|89122|tripartite motif containing 4##AK293565|TRIM4|89122|tripartite motif containing 4##AF220023|TRIM4|89122|tripartite motif containing 4##AF220024|TRIM4|89122|tripartite motif containing 4##AK092892|TRIM4|89122|tripartite motif containing 4##NM_033017|TRIM4|89122|tripartite motif containing 4##NM_033091|TRIM4|89122|tripartite motif containing 4	0.972789	CTCF.p2:-7:0.973
chr8	7079569	7079675	reg1014587.p2	7.901	+	BC107079 BC069690 NM_021010	-165368	-	BC093791 BC112188 BC069423 M21130 M23281 BC119706 X52053 BC027917 M26602 NM_005217 X13621 NM_001042500 NM_004084	-203823	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	-222922	-	NM_001164452 NM_001164456	34803	+	NM_001164452 NM_001164456	57669	+	NM_001164455	65291	+	BC107079|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC069690|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##NM_021010|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M23281|DEFA3|1668|defensin, alpha 3, neutrophil-specific##BC119706|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X52053|DEFA1|1667|defensin, alpha 1##BC027917|DEFA3|1668|defensin, alpha 3, neutrophil-specific##M26602|DEFA1|1667|defensin, alpha 1##NM_005217|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X13621|DEFA3|1668|defensin, alpha 3, neutrophil-specific##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164455|FAM90A5|441315|family with sequence similarity 90, member A5	0.999491	CTCF.p2:3:0.999
chr1	192988703	192988819	reg1017486.p2	7.899	+	BC042755 BC044742 NM_002923 TSC_hg19_v1_chr1_+_192778168 AK313668 BC007049 L13463 AY971351 AB528517 AF493926 BT007065 CR457410 CU675517 DQ893178 DQ896478	-210577	+	NM_002927 NM_144766 AF030107 BC016667	-383477	+	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	-443853	+	BT006790 CU692976 AB528990 AF151828 AK225794 BC015521 TSC_hg19_v1_chr1_-_193028470 AK314445 AK316064 AK024751	39676	-	BC025369 TSC_hg19_v1_chr1_-_193028505 AK296487 AF147717 NM_001199261 NM_001199262 NM_001199263 NM_015984	39745	-	TSC_hg19_v1_chr1_-_193028528 AF157320	39770	-	BC042755|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC044742|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002923|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AK313668|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC007049|RGS2|5997|regulator of G-protein signaling 2, 24kDa##L13463|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AY971351|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AF493926|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT007065|RGS2|5997|regulator of G-protein signaling 2, 24kDa##CR457410|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ893178|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ896478|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002927|RGS13|6003|regulator of G-protein signaling 13##NM_144766|RGS13|6003|regulator of G-protein signaling 13##AF030107|RGS13|6003|regulator of G-protein signaling 13##BC016667|RGS13|6003|regulator of G-protein signaling 13##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1##BT006790|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AF151828|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK225794|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##BC015521|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK314445|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK316064|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK024751|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##BC025369|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK296487|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AF147717|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##NM_001199261|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##NM_001199262|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##NM_001199263|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##NM_015984|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AF157320|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5	0.996884	CTCF.p2:11:0.997
chr12	103134570	103134669	reg1015734.p1	7.899	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-260237	-	M11568 TSC_hg19_v1_chr12_-_102874344	-260277	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-260297	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	176347	-	TSC_hg19_v1_chr12_-_103311062 BC026251	176444	-	L47726 NM_000277 U49897	176761	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.986099	CTCF.p2:25:0.986
chr11	95745329	95745466	reg1013710.p1	7.898	+	BC052990 BC012086 TSC_hg19_v1_chr11_-_95657272 BC034474 BX647997 NM_001243571 NM_016156 NM_201278 NM_201281 AB028996	-88041	-	AK293243 TSC_hg19_v1_chr11_-_95657092 AK302940 BC040432 AK291277	-88346	-	D42054 BC039711 BC029385 AB385276 AY225092 CU691748 TSC_hg19_v1_chr11_+_95523869	-221557	+	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	331006	-	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	377645	-	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	377777	+	BC052990|MTMR2|8898|myotubularin related protein 2##BC012086|MTMR2|8898|myotubularin related protein 2##BC034474|MTMR2|8898|myotubularin related protein 2##BX647997|MTMR2|8898|myotubularin related protein 2##NM_001243571|MTMR2|8898|myotubularin related protein 2##NM_016156|MTMR2|8898|myotubularin related protein 2##NM_201278|MTMR2|8898|myotubularin related protein 2##NM_201281|MTMR2|8898|myotubularin related protein 2##AB028996|MTMR2|8898|myotubularin related protein 2##AK293243|MTMR2|8898|myotubularin related protein 2##AK302940|MTMR2|8898|myotubularin related protein 2##BC040432|MTMR2|8898|myotubularin related protein 2##AK291277|MTMR2|8898|myotubularin related protein 2##D42054|CEP57|9702|centrosomal protein 57kDa##BC039711|CEP57|9702|centrosomal protein 57kDa##BC029385|CEP57|9702|centrosomal protein 57kDa##AY225092|CEP57|9702|centrosomal protein 57kDa##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)	0.010971	
chr15	84981872	84981996	reg1015757.p2	7.898	+	NM_001243531	-140693	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-659107	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-865706	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	162347	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	215538	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	215572	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	0.919612	CTCF.p2:18:0.920
chr17	34797576	34797708	reg1019634.p1	7.898	+	BC047739 AL136860 AK301823 BC071680 AK225985 AK302064 NM_001123392	-40628	-	AY766447 AY766449 AY766450 AY766455 AY766456 BC070310 NM_001001435 NM_207007 BC071718 BC130456 BC130458 BC144393 BC144394 HQ258694	-157574	+	D63785 BT006783 BC146914 BC146919 BC147008 BC147013 BC007783 X52149 BC027888 BC063472 NM_001001437 NM_021006 BC107710	-171963	-	BC033670 BC047739 AK225985 AK302064 BC075809 AK292344 NM_001040282	10420	-	NM_004773 AF400652 BC105608 BC017931 AK290858 AK310022 AB464422 AK308583 L40410 TSC_hg19_v1_chr17_+_34842662	44925	+	TSC_hg19_v1_chr17_-_34890646 AK304073 BC008900 AK026518 AK299802	93081	-	BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK302064|TBC1D3|729873|TBC1 domain family, member 3##NM_001123392|TBC1D3H|729877|TBC1 domain family, member 3H##AY766447|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766449|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766450|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766455|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC070310|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_001001435|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_207007|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##BC130456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC130458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144393|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144394|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##HQ258694|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BT006783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC146914|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC146919|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147008|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147013|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC007783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##X52149|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC027888|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC063472|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_001001437|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_021006|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC107710|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC075809|TBC1D3G|654341|TBC1 domain family, member 3G##AK292344|TBC1D3G|654341|TBC1 domain family, member 3G##NM_001040282|TBC1D3G|654341|TBC1 domain family, member 3G##NM_004773|ZNHIT3|9326|zinc finger, HIT-type containing 3##AF400652|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC105608|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC017931|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK290858|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK310022|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK308583|ZNHIT3|9326|zinc finger, HIT-type containing 3##L40410|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK304073|MYO19|80179|myosin XIX##BC008900|MYO19|80179|myosin XIX##AK026518|MYO19|80179|myosin XIX##AK299802|MYO19|80179|myosin XIX	0.243231	CTCF.p2:20:0.231
chr7	100048182	100048309	reg1016804.p1	7.898	+	TSC_hg19_v1_chr7_-_100034098 BC026269 NM_145030	-14168	-	TSC_hg19_v1_chr7_+_100027484 AK291366 BC000556 BC018935	-20716	+	BC016396 NM_019606 TSC_hg19_v1_chr7_+_100027373	-20920	+	BC031966 NM_001004323	13648	-	BC001966 BC031622 AK314824 TSC_hg19_v1_chr7_-_100076802 BC002972 BC010406 AK296580 AK297702 AK310800 BC001486 NM_030935	28582	-	AK124773 NM_173564	33304	+	BC026269|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##NM_145030|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##AK291366|MEPCE|56257|methylphosphate capping enzyme##BC000556|MEPCE|56257|methylphosphate capping enzyme##BC018935|MEPCE|56257|methylphosphate capping enzyme##BC016396|MEPCE|56257|methylphosphate capping enzyme##NM_019606|MEPCE|56257|methylphosphate capping enzyme##BC031966|C7orf61|402573|chromosome 7 open reading frame 61##NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61##BC001966|TSC22D4|81628|TSC22 domain family, member 4##BC031622|TSC22D4|81628|TSC22 domain family, member 4##AK314824|TSC22D4|81628|TSC22 domain family, member 4##BC002972|TSC22D4|81628|TSC22 domain family, member 4##BC010406|TSC22D4|81628|TSC22 domain family, member 4##AK296580|TSC22D4|81628|TSC22 domain family, member 4##AK297702|TSC22D4|81628|TSC22 domain family, member 4##BC001486|TSC22D4|81628|TSC22 domain family, member 4##NM_030935|TSC22D4|81628|TSC22 domain family, member 4##AK124773|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_173564|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1	0.997828	CTCF.p2:5:0.998
chr1	17011376	17011500	reg1018461.p1	7.897	+	AK123337 TSC_hg19_v1_chr1_-_16971178	-40261	-	TSC_hg19_v1_chr1_-_16971175 AK090414	-40272	-	TSC_hg19_v1_chr1_-_16940046 AK123260 AY894575 NM_017940 BC066930 BC010124 BC082236 BC110431 AK055895 BC093404	-71542	-	TSC_hg19_v1_chr1_+_17248425 NM_014675	236996	+	TSC_hg19_v1_chr1_-_17307116 BC028033 AK222751 BC015039 NM_001135248 NM_002403	295711	-	AK301655 NM_001135247 NM_017459	296638	-	AK123337|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK123260|NBPF1|55672|neuroblastoma breakpoint family, member 1##AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_017940|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC066930|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC010124|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC110431|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK055895|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC093404|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_014675|CROCC|9696|ciliary rootlet coiled-coil, rootletin##BC028033|MFAP2|4237|microfibrillar-associated protein 2##AK222751|MFAP2|4237|microfibrillar-associated protein 2##BC015039|MFAP2|4237|microfibrillar-associated protein 2##NM_001135248|MFAP2|4237|microfibrillar-associated protein 2##NM_002403|MFAP2|4237|microfibrillar-associated protein 2##AK301655|MFAP2|4237|microfibrillar-associated protein 2##NM_001135247|MFAP2|4237|microfibrillar-associated protein 2##NM_017459|MFAP2|4237|microfibrillar-associated protein 2	0.995154	CTCF.p2:6:0.995
chr11	83539142	83539274	reg1020012.p1	7.897	+	AK299778 CR933674 NM_001142702	-145757	-	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	-541803	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	-542175	-	AK294375 AK126776 AK295624 NM_001142700	445068	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	489173	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	1095024	-	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)	1.004481	CTCF.p2:-17:0.993
chr4	56187973	56188096	reg1017994.p1	7.897	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	-196280	-	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	-663900	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-1092570	+	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	24382	+	TSC_hg19_v1_chr4_+_56212475 CU677982 CR457312	24450	+	TSC_hg19_v1_chr4_+_56261819 AK123358	73761	+	AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3##CR457312|SRD5A3|79644|steroid 5 alpha-reductase 3	0.969537	CTCF.p2:2:0.970
chr6	27720117	27720283	reg1015790.p1	7.897	+	TSC_hg19_v1_chr6_-_27440879 BC022992 AK123011 AK312804 NM_007149	-279499	-	TSC_hg19_v1_chr6_+_27356537 NM_001076781 AK092633 AK294965 AX747641 BC132797	-363645	+	AF352327 AF336874 BC107050 NM_032030	-427642	+	EU446971 TSC_hg19_v1_chr6_-_27775708 NM_003519 AK312114 BC093759 BC093761	55523	-	BC112254 BC112256 TSC_hg19_v1_chr6_+_27775950 AK311766 BC062305 NM_003509 HQ258047	55741	+	BC007518 TSC_hg19_v1_chr6_+_27777828 AK311991 NM_003536 EU446975 BC096128 BC096129 BC096130 BC143046 BC148243 BC148250	57582	+	BC022992|ZNF184|7738|zinc finger protein 184##AK123011|ZNF184|7738|zinc finger protein 184##AK312804|ZNF184|7738|zinc finger protein 184##NM_007149|ZNF184|7738|zinc finger protein 184##NM_001076781|ZNF391|346157|zinc finger protein 391##AK092633|ZNF391|346157|zinc finger protein 391##AK294965|ZNF391|346157|zinc finger protein 391##BC132797|ZNF391|346157|zinc finger protein 391##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83##EU446971|HIST1H2BL|8340|histone cluster 1, H2bl##NM_003519|HIST1H2BL|8340|histone cluster 1, H2bl##AK312114|HIST1H2BL|8340|histone cluster 1, H2bl##BC093759|HIST1H2BL|8340|histone cluster 1, H2bl##BC093761|HIST1H2BL|8340|histone cluster 1, H2bl##BC112254|HIST1H2AI|8329|histone cluster 1, H2ai##BC112256|HIST1H2AI|8329|histone cluster 1, H2ai##AK311766|HIST1H2AI|8329|histone cluster 1, H2ai##BC062305|HIST1H3F|8968|histone cluster 1, H3f##NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai##HQ258047|HIST1H2AM|8336|histone cluster 1, H2am##BC007518|HIST1H3H|8357|histone cluster 1, H3h##AK311991|HIST1H3H|8357|histone cluster 1, H3h##NM_003536|HIST1H3H|8357|histone cluster 1, H3h##EU446975|HIST1H3H|8357|histone cluster 1, H3h##BC096128|HIST1H3H|8357|histone cluster 1, H3h##BC096129|HIST1H3H|8357|histone cluster 1, H3h##BC096130|HIST1H3H|8357|histone cluster 1, H3h##BC143046|HIST1H3H|8357|histone cluster 1, H3h##BC148243|HIST1H3H|8357|histone cluster 1, H3h##BC148250|HIST1H3H|8357|histone cluster 1, H3h	0.225466	CTCF.p2:15:0.225
chr7	6595990	6596104	reg1018703.p1	7.897	+	NM_001145118	-4981	-	DQ892879 DQ896128 CU675925 CU680460 CU687206 X63745 TSC_hg19_v1_chr7_-_6523784 BC008081 BC012994 BC071982 AK127440 AK315702 NM_001100603 NM_006854	-72279	-	TSC_hg19_v1_chr7_-_6487586 AK075128 AK074744 AF450090 NM_001142936 NM_139179	-108439	-	TSC_hg19_v1_chr7_+_6617111 AK223532 NM_001134387 NM_001134388 NM_001134389 NM_018106 AK001341 AK308971 AL136674 BC001239 AY359090	21071	+	TSC_hg19_v1_chr7_+_6629662 BC001076 BC005121 AK056149 NM_024067	33739	+	NM_017560	59479	+	NM_001145118|GRID2IP|392862|glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein##DQ892879|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##DQ896128|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##X63745|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC008081|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC012994|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC071982|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##AK315702|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##NM_001100603|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##NM_006854|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##AK075128|DAGLB|221955|diacylglycerol lipase, beta##AK074744|DAGLB|221955|diacylglycerol lipase, beta##AF450090|DAGLB|221955|diacylglycerol lipase, beta##NM_001142936|DAGLB|221955|diacylglycerol lipase, beta##NM_139179|DAGLB|221955|diacylglycerol lipase, beta##AK223532|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134387|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134388|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134389|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_018106|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK001341|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK308971|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AL136674|ZDHHC4|55146|zinc finger, DHHC-type containing 4##BC001239|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AY359090|ZDHHC4|55146|zinc finger, DHHC-type containing 4##BC001076|C7orf26|79034|chromosome 7 open reading frame 26##BC005121|C7orf26|79034|chromosome 7 open reading frame 26##AK056149|C7orf26|79034|chromosome 7 open reading frame 26##NM_024067|C7orf26|79034|chromosome 7 open reading frame 26##NM_017560|ZNF853|54753|zinc finger protein 853	0.947394	CTCF.p2:-10:0.947
chrX	47422153	47422271	reg1016781.p2	7.897	+	NM_001654 X04790 TSC_hg19_v1_chrX_+_47420605 AB208831 AK300975 AK130043 AK297453 AK307747 BC002466 BC007514	-1645	+	BC015023 NM_007130 NM_153380	-79868	-	U28687 NM_003446 BC075003 AB528013 EU446919	-192189	+	TSC_hg19_v1_chrX_+_47441773 NM_003254 AK074854 AK296116 BC000866 BC007097	19511	+	TSC_hg19_v1_chrX_+_47441834 X03124 M12670 AK310206 AK311937 AK307222 M59906 X02598	19611	+	TSC_hg19_v1_chrX_-_47479098 AB591026	56900	-	NM_001654|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##X04790|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AB208831|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK300975|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK130043|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK297453|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK307747|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC002466|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC007514|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC015023|ZNF41|7592|zinc finger protein 41##NM_007130|ZNF41|7592|zinc finger protein 41##NM_153380|ZNF41|7592|zinc finger protein 41##U28687|ZNF157|7712|zinc finger protein 157##NM_003446|ZNF157|7712|zinc finger protein 157##BC075003|ZNF157|7712|zinc finger protein 157##EU446919|ZNF157|7712|zinc finger protein 157##NM_003254|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK074854|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK296116|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC000866|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC007097|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X03124|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M12670|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK310206|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK311937|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M59906|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X02598|TIMP1|7076|TIMP metallopeptidase inhibitor 1	0.26894	CTCF.p2:-6:0.269
chr13	88321756	88321876	reg1016687.p1	7.896	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-1948377	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-3865316	-	TSC_hg19_v1_chr13_-_84456424 BC051738	-3865391	-	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	3053	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	3729088	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	5557611	+	BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6	0.750074	CTCF.p2:11:0.737
chrX	55084177	55084337	reg1017499.p1	7.896	+	TSC_hg19_v1_chrX_-_55057411 AK291589 X60364 AK313118 NM_000032 NM_001037967 NM_001037968	-26805	-	TSC_hg19_v1_chrX_+_55026795 NM_014481 AF119046 AJ011311 AB021260 AK301555 AK316186 BC002959 BC007669 AB049211 AB463412 DQ893669 DQ895556	-57440	+	BC096077 BC096078 BC096079 NM_002625 X52638	-63747	-	NM_001015038 BC130359	17259	+	BC054022 NM_207339	31239	+	NM_001166703 TSC_hg19_v1_chrX_-_55187541 AK299935	103287	-	AK291589|ALAS2|212|aminolevulinate, delta-, synthase 2##X60364|ALAS2|212|aminolevulinate, delta-, synthase 2##AK313118|ALAS2|212|aminolevulinate, delta-, synthase 2##NM_000032|ALAS2|212|aminolevulinate, delta-, synthase 2##NM_001037967|ALAS2|212|aminolevulinate, delta-, synthase 2##NM_001037968|ALAS2|212|aminolevulinate, delta-, synthase 2##NM_014481|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AF119046|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AJ011311|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AB021260|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AK301555|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AK316186|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##BC002959|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AB049211|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##DQ893669|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##DQ895556|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##BC096077|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##BC096078|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##BC096079|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##NM_002625|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##X52638|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##NM_001015038|PAGE2B|389860|P antigen family, member 2B##BC130359|PAGE2B|389860|P antigen family, member 2B##BC054022|PAGE2|203569|P antigen family, member 2 (prostate associated)##NM_207339|PAGE2|203569|P antigen family, member 2 (prostate associated)##NM_001166703|FAM104B|90736|family with sequence similarity 104, member B##AK299935|FAM104B|90736|family with sequence similarity 104, member B	0.0	
chr19	18434133	18434243	reg1017581.p1	7.895	+	TSC_hg19_v1_chr19_-_18433953 AF117235 NM_001252129 NM_012321	-222	-	TSC_hg19_v1_chr19_-_18433887 AJ238096 AF251218 BC023665 AF182290 BC003652 BC022198 BC000387	-301	-	TSC_hg19_v1_chr19_-_18392451 X56681	-41720	-	TSC_hg19_v1_chr19_+_18451449 AK289968 NM_017712 AK294497 BC042138 BC028063 AJ278828 AK000215	17219	+	TSC_hg19_v1_chr19_+_18496967 AB000584 AK225425 AK225431 AK291530 NM_004864 BC008962 U88323 BC000529 AF019770 U51731 BT019465	62794	+	BC025744 TSC_hg19_v1_chr19_-_18508433 NM_145256 BC053659 BC033825	74232	-	AF117235|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001252129|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012321|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238096|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF251218|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC023665|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182290|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC003652|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC022198|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC000387|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##X56681|JUND|3727|jun D proto-oncogene##AK289968|PGPEP1|54858|pyroglutamyl-peptidase I##NM_017712|PGPEP1|54858|pyroglutamyl-peptidase I##AK294497|PGPEP1|54858|pyroglutamyl-peptidase I##BC042138|PGPEP1|54858|pyroglutamyl-peptidase I##BC028063|PGPEP1|54858|pyroglutamyl-peptidase I##AJ278828|PGPEP1|54858|pyroglutamyl-peptidase I##AK000215|PGPEP1|54858|pyroglutamyl-peptidase I##AB000584|GDF15|9518|growth differentiation factor 15##AK225431|GDF15|9518|growth differentiation factor 15##AK291530|GDF15|9518|growth differentiation factor 15##NM_004864|GDF15|9518|growth differentiation factor 15##BC008962|GDF15|9518|growth differentiation factor 15##U88323|GDF15|9518|growth differentiation factor 15##BC000529|GDF15|9518|growth differentiation factor 15##AF019770|GDF15|9518|growth differentiation factor 15##U51731|GDF15|9518|growth differentiation factor 15##BT019465|GDF15|9518|growth differentiation factor 15##BC025744|LRRC25|126364|leucine rich repeat containing 25##NM_145256|LRRC25|126364|leucine rich repeat containing 25##BC053659|LRRC25|126364|leucine rich repeat containing 25##BC033825|LRRC25|126364|leucine rich repeat containing 25	0.0	
chr7	104793499	104793616	reg1017683.p1	7.895	+	TSC_hg19_v1_chr7_+_104752313 AY222296 AY438698	-41179	+	TSC_hg19_v1_chr7_+_104681423 AY157990	-112143	+	TSC_hg19_v1_chr7_+_104654651 AY147037 NM_018682 NM_182931 BC053906 BC062583 BC009061 BC001296 BC142987 BC040004 AF519459 AK000940 BC040848	-138783	+	BC035214 TSC_hg19_v1_chr7_-_104909496 U88666 NM_182691	115926	-	TSC_hg19_v1_chr7_-_105029265 AB489157	235708	-	TSC_hg19_v1_chr7_-_105029346 NM_182692	235785	-	AY222296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY438698|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY157990|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY147037|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##NM_018682|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##NM_182931|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC053906|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC062583|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC009061|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC001296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC142987|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC040004|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AF519459|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AK000940|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC040848|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC035214|SRPK2|6733|SRSF protein kinase 2##U88666|SRPK2|6733|SRSF protein kinase 2##NM_182691|SRPK2|6733|SRSF protein kinase 2##NM_182692|SRPK2|6733|SRSF protein kinase 2	0.152079	
chr7	2607361	2607509	reg1017797.p2	7.895	+	AK092404 AX747526 TSC_hg19_v1_chr7_+_2598712 BC061518 AL136792 AK293372	-8688	+	TSC_hg19_v1_chr7_+_2598682 AK309646 BC043150	-8746	+	TSC_hg19_v1_chr7_+_2598649 AK302053	-8780	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	64168	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	64268	+	AK289723 AB075830 BC146753 NM_133463	111723	+	AK092404|IQCE|23288|IQ motif containing E##BC061518|IQCE|23288|IQ motif containing E##AL136792|IQCE|23288|IQ motif containing E##AK293372|IQCE|23288|IQ motif containing E##AK309646|IQCE|23288|IQ motif containing E##BC043150|IQCE|23288|IQ motif containing E##AK302053|IQCE|23288|IQ motif containing E##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1	0.072363	
chr7	98984657	98984766	reg1017720.p2	7.895	+	TSC_hg19_v1_chr7_+_98972352 AK314818 BC002562 BC007555	-12345	+	TSC_hg19_v1_chr7_+_98972332 BC002988 AF006084	-12375	+	TSC_hg19_v1_chr7_+_98972300 NM_005720	-12417	+	CU674336 BC007873 U41745 TSC_hg19_v1_chr7_-_99006199 BC071993	21481	-	TSC_hg19_v1_chr7_-_99006218 BC000684	21505	-	TSC_hg19_v1_chr7_-_99006284 NM_014891	21591	-	AK314818|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##BC002562|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##BC007555|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##BC002988|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##AF006084|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##NM_005720|ARPC1B|10095|actin related protein 2/3 complex, subunit 1B, 41kDa##BC007873|PDAP1|11333|PDGFA associated protein 1##U41745|PDAP1|11333|PDGFA associated protein 1##BC071993|PDAP1|11333|PDGFA associated protein 1##BC000684|PDAP1|11333|PDGFA associated protein 1##NM_014891|PDAP1|11333|PDGFA associated protein 1	0.991356	CTCF.p2:23:0.991
chr9	118355961	118356083	reg1017921.p1	7.895	+	AB022761 NM_017418	-451926	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-475549	-	AK313619 NM_001244 NM_001252290	-663148	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	560048	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	1093440	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	1093584	+	AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32	0.932154	CTCF.p2:-9:0.932
chr11	57247911	57248050	reg1018419.p1	7.893	+	TSC_hg19_v1_chr11_+_57228149 BC113673 BC117276 BC143818 AF532858 AX751514 AY250221 DQ864979 NM_178570	-19748	+	NM_017611	-52928	-	TSC_hg19_v1_chr11_-_57194592 AK075552 AK298028 AK315839 NM_199329	-53388	-	AF045584 TSC_hg19_v1_chr11_-_57282334 BC001639 NM_001198810	34356	-	TSC_hg19_v1_chr11_-_57283184 AB103033 NM_003627	35192	-	AK289751 BC032133 TSC_hg19_v1_chr11_-_57298210 AF150089 NM_012456	50225	-	BC113673|RTN4RL2|349667|reticulon 4 receptor-like 2##BC117276|RTN4RL2|349667|reticulon 4 receptor-like 2##BC143818|RTN4RL2|349667|reticulon 4 receptor-like 2##AF532858|RTN4RL2|349667|reticulon 4 receptor-like 2##AX751514|RTN4RL2|349667|reticulon 4 receptor-like 2##AY250221|RTN4RL2|349667|reticulon 4 receptor-like 2##DQ864979|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_178570|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_017611|SLC43A3|29015|solute carrier family 43, member 3##AK075552|SLC43A3|29015|solute carrier family 43, member 3##AK298028|SLC43A3|29015|solute carrier family 43, member 3##AK315839|SLC43A3|29015|solute carrier family 43, member 3##NM_199329|SLC43A3|29015|solute carrier family 43, member 3##AF045584|SLC43A1|8501|solute carrier family 43, member 1##BC001639|SLC43A1|8501|solute carrier family 43, member 1##NM_001198810|SLC43A1|8501|solute carrier family 43, member 1##AB103033|SLC43A1|8501|solute carrier family 43, member 1##NM_003627|SLC43A1|8501|solute carrier family 43, member 1##AK289751|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##BC032133|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##AF150089|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##NM_012456|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)	0.833627	CTCF.p2:-6:0.834
chr14	76922685	76922807	reg1017574.p1	7.893	+	NM_004452	-85057	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-304440	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-304469	+	TSC_hg19_v1_chr14_+_77227817 AK094330	305054	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	305709	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	306306	+	NM_004452|ESRRB|2103|estrogen-related receptor beta##AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1	0.998763	CTCF.p2:-3:0.999
chr2	172971079	172971214	reg1020214.p1	7.893	+	AK291367 AK316129 TSC_hg19_v1_chr2_-_172967629	-3517	-	TSC_hg19_v1_chr2_-_172967234 HQ258018 AB208823 AK297503 BC032558 NM_004405	-3791	-	L07919 TSC_hg19_v1_chr2_-_172967055	-4112	-	AK311695 AK296496 TSC_hg19_v1_chr2_+_173292147	320981	+	TSC_hg19_v1_chr2_+_173292316 NM_000210 NM_001079818 BC007002	321174	+	TSC_hg19_v1_chr2_+_173292395 X53586 BC136455 BC136456 X59512 AB208842	321333	+	AK291367|DLX2|1746|distal-less homeobox 2##AK316129|DLX2|1746|distal-less homeobox 2##HQ258018|DLX2|1746|distal-less homeobox 2##AB208823|DLX2|1746|distal-less homeobox 2##AK297503|DLX2|1746|distal-less homeobox 2##BC032558|DLX2|1746|distal-less homeobox 2##NM_004405|DLX2|1746|distal-less homeobox 2##L07919|DLX2|1746|distal-less homeobox 2##AK311695|ITGA6|3655|integrin, alpha 6##AK296496|ITGA6|3655|integrin, alpha 6##NM_000210|ITGA6|3655|integrin, alpha 6##NM_001079818|ITGA6|3655|integrin, alpha 6##BC007002|ITGA6|3655|integrin, alpha 6##X53586|ITGA6|3655|integrin, alpha 6##BC136455|ITGA6|3655|integrin, alpha 6##BC136456|ITGA6|3655|integrin, alpha 6##X59512|ITGA6|3655|integrin, alpha 6##AB208842|ITGA6|3655|integrin, alpha 6	0.0	
chr2	183628188	183628293	reg1019274.p1	7.892	+	TSC_hg19_v1_chr2_+_183608333 AK074905	-19890	+	TSC_hg19_v1_chr2_+_183582683 BC107425 AF314529 AY089971 HQ258514 HQ258651 AL832646 AK027450	-45493	+	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	-47166	+	BT019883 DQ890944 DQ894106 AK130009 U68057 U91903 BC027855 AK312741 U24163 NM_001463	103148	-	TSC_hg19_v1_chr2_-_183903062 BT007033 AB383914 DQ893545 DQ893809 AB014509 AK292914 BC015025	274744	-	TSC_hg19_v1_chr2_-_183903230 NM_013436 NM_205842	275004	-	AK074905|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC107425|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF314529|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY089971|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258514|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258651|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832646|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027450|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BT019883|FRZB|2487|frizzled-related protein##DQ890944|FRZB|2487|frizzled-related protein##DQ894106|FRZB|2487|frizzled-related protein##AK130009|FRZB|2487|frizzled-related protein##U68057|FRZB|2487|frizzled-related protein##U91903|FRZB|2487|frizzled-related protein##BC027855|FRZB|2487|frizzled-related protein##AK312741|FRZB|2487|frizzled-related protein##U24163|FRZB|2487|frizzled-related protein##NM_001463|FRZB|2487|frizzled-related protein##BT007033|NCKAP1|10787|NCK-associated protein 1##DQ893545|NCKAP1|10787|NCK-associated protein 1##DQ893809|NCKAP1|10787|NCK-associated protein 1##AB014509|NCKAP1|10787|NCK-associated protein 1##AK292914|NCKAP1|10787|NCK-associated protein 1##BC015025|NCKAP1|10787|NCK-associated protein 1##NM_013436|NCKAP1|10787|NCK-associated protein 1##NM_205842|NCKAP1|10787|NCK-associated protein 1	0.08971	
chr22	39077788	39077943	reg1019998.p1	7.892	+	TSC_hg19_v1_chr22_+_39052675 AL136686 AL050345 BC016139 AF331041	-25169	+	TSC_hg19_v1_chr22_+_39052648 AK307265 AK311928 NM_001002880 NM_015373	-25217	+	TSC_hg19_v1_chr22_-_39052579 NM_001013647	-25259	-	NM_020243 TSC_hg19_v1_chr22_+_39077954 AK223021	90	+	AK024731 TSC_hg19_v1_chr22_+_39077961 AB041906 AF163256 AB040119	102	+	TSC_hg19_v1_chr22_+_39077977 BC009363 CR456475	111	+	AL136686|CBY1|25776|chibby homolog 1 (Drosophila)##AL050345|CBY1|25776|chibby homolog 1 (Drosophila)##BC016139|CBY1|25776|chibby homolog 1 (Drosophila)##AF331041|CBY1|25776|chibby homolog 1 (Drosophila)##AK307265|CBY1|25776|chibby homolog 1 (Drosophila)##AK311928|CBY1|25776|chibby homolog 1 (Drosophila)##NM_001002880|CBY1|25776|chibby homolog 1 (Drosophila)##NM_015373|CBY1|25776|chibby homolog 1 (Drosophila)##NM_001013647|LOC646851|646851|putative uncharacterized protein LOC388900##NM_020243|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)##AK223021|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)##AK024731|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)##AB041906|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)##AF163256|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)##AB040119|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)##BC009363|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)##CR456475|TOMM22|56993|translocase of outer mitochondrial membrane 22 homolog (yeast)	0.0	
chr3	112754345	112754477	reg1016435.p1	7.892	+	BC067743 TSC_hg19_v1_chr3_-_112738514 AK295954 AK293218 BC014673 NM_015412 CR749341	-15865	-	TSC_hg19_v1_chr3_-_112738512 AK301161 EU831596 EU831683 EU831956 EU832050 CU688320 AL117573 BC056663 AK295165 AK304022 AK024325 AK300811 AK304083	-15913	-	NM_014170 NM_138485 BC037163 TSC_hg19_v1_chr3_+_112709842 BC000003 AF161484 BC010137 AK289611 CU691454 DQ892307 DQ895506	-44589	+	AY358328 NM_033254 AK309055	176988	+	BC101582 BC113553 AK056472 NM_001164496 NM_018338	405928	-	TSC_hg19_v1_chr3_-_113233690 AK296160	479275	-	BC067743|C3orf17|25871|chromosome 3 open reading frame 17##AK295954|C3orf17|25871|chromosome 3 open reading frame 17##AK293218|C3orf17|25871|chromosome 3 open reading frame 17##BC014673|C3orf17|25871|chromosome 3 open reading frame 17##NM_015412|C3orf17|25871|chromosome 3 open reading frame 17##CR749341|C3orf17|25871|chromosome 3 open reading frame 17##AK301161|C3orf17|25871|chromosome 3 open reading frame 17##EU831596|C3orf17|25871|chromosome 3 open reading frame 17##EU831683|C3orf17|25871|chromosome 3 open reading frame 17##EU831956|C3orf17|25871|chromosome 3 open reading frame 17##EU832050|C3orf17|25871|chromosome 3 open reading frame 17##AL117573|C3orf17|25871|chromosome 3 open reading frame 17##BC056663|C3orf17|25871|chromosome 3 open reading frame 17##AK295165|C3orf17|25871|chromosome 3 open reading frame 17##AK304022|C3orf17|25871|chromosome 3 open reading frame 17##AK024325|C3orf17|25871|chromosome 3 open reading frame 17##AK300811|C3orf17|25871|chromosome 3 open reading frame 17##AK304083|C3orf17|25871|chromosome 3 open reading frame 17##NM_014170|GTPBP8|29083|GTP-binding protein 8 (putative)##NM_138485|GTPBP8|29083|GTP-binding protein 8 (putative)##BC037163|GTPBP8|29083|GTP-binding protein 8 (putative)##BC000003|GTPBP8|29083|GTP-binding protein 8 (putative)##AF161484|GTPBP8|29083|GTP-binding protein 8 (putative)##BC010137|GTPBP8|29083|GTP-binding protein 8 (putative)##AK289611|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ892307|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ895506|GTPBP8|29083|GTP-binding protein 8 (putative)##AY358328|BOC|91653|Boc homolog (mouse)##NM_033254|BOC|91653|Boc homolog (mouse)##AK309055|BOC|91653|Boc homolog (mouse)##BC101582|WDR52|55779|WD repeat domain 52##BC113553|WDR52|55779|WD repeat domain 52##AK056472|WDR52|55779|WD repeat domain 52##NM_001164496|WDR52|55779|WD repeat domain 52##NM_018338|WDR52|55779|WD repeat domain 52##AK296160|SPICE1|152185|spindle and centriole associated protein 1	0.882395	CTCF.p2:11:0.882
chr3	161419047	161419157	reg1016981.p2	7.892	+	NM_001080440	-204507	+	AF458592 BC037817 NM_001040100	-329294	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-479981	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	3377176	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	3495403	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	4136091	-	NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase	0.0	
chr3	98331602	98331749	reg1015112.p2	7.891	+	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	-19256	-	AK313375 BC101779 BC101781 BC069437 CU686810 NM_005290	-80866	+	TSC_hg19_v1_chr3_-_98241835 NM_001040181 NM_001040182 NM_001040183 NM_001040199 NM_001040200 NM_019895	-89809	-	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	119570	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	119912	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	288817	-	AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AK313375|GPR15|2838|G protein-coupled receptor 15##BC101779|GPR15|2838|G protein-coupled receptor 15##BC101781|GPR15|2838|G protein-coupled receptor 15##BC069437|GPR15|2838|G protein-coupled receptor 15##NM_005290|GPR15|2838|G protein-coupled receptor 15##NM_001040181|CLDND1|56650|claudin domain containing 1##NM_001040182|CLDND1|56650|claudin domain containing 1##NM_001040183|CLDND1|56650|claudin domain containing 1##NM_001040199|CLDND1|56650|claudin domain containing 1##NM_001040200|CLDND1|56650|claudin domain containing 1##NM_019895|CLDND1|56650|claudin domain containing 1##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2	0.807485	CTCF.p2:-8:0.807
chrX	154146359	154146512	reg1019256.p1	7.891	+	TSC_hg19_v1_chrX_+_154114626 NM_012151 BC071963 AB462986 AM393473 AM393736 BC039693 DQ896667 NM_001007523 NM_001007524	-31806	+	CU692668 AK313707 BC111967 BC111969 M90707 BC022513 AK289947 BC064380 BC098389 NM_019863	-31932	-	BC130510 BC130512 AF254576 NM_001017990 NM_080720 BC134365 HQ258044 BC101415 BC101417 BC101418 BC128034 CR542230	-33149	+	FN811132 AX746360 X01179 K01740 BC150305 AK292902 M14113 NM_000132 AK307726	104463	-	NM_023934 AJ272054 BC000255 AF320778 AK313143 BC072685 TSC_hg19_v1_chrX_+_154255191 BC108657 CU674108 AB528138 AM393227 AM393536 AY032594	108703	+	AK295164 TSC_hg19_v1_chrX_-_154255216	108780	-	NM_012151|F8A1|8263|coagulation factor VIII-associated 1##BC071963|F8A1|8263|coagulation factor VIII-associated 1##AM393473|F8A1|8263|coagulation factor VIII-associated 1##AM393736|F8A1|8263|coagulation factor VIII-associated 1##BC039693|F8A1|8263|coagulation factor VIII-associated 1##DQ896667|F8A1|8263|coagulation factor VIII-associated 1##NM_001007523|F8A2|474383|coagulation factor VIII-associated 2##NM_001007524|F8A3|474384|coagulation factor VIII-associated 3##AK313707|F8|2157|coagulation factor VIII, procoagulant component##BC111967|F8|2157|coagulation factor VIII, procoagulant component##BC111969|F8|2157|coagulation factor VIII, procoagulant component##M90707|F8|2157|coagulation factor VIII, procoagulant component##BC022513|F8|2157|coagulation factor VIII, procoagulant component##AK289947|F8|2157|coagulation factor VIII, procoagulant component##BC064380|F8|2157|coagulation factor VIII, procoagulant component##BC098389|F8|2157|coagulation factor VIII, procoagulant component##NM_019863|F8|2157|coagulation factor VIII, procoagulant component##BC130510|H2AFB3|83740|H2A histone family, member B3##BC130512|H2AFB3|83740|H2A histone family, member B3##AF254576|H2AFB3|83740|H2A histone family, member B3##NM_001017990|H2AFB1|474382|H2A histone family, member B1##NM_080720|H2AFB3|83740|H2A histone family, member B3##BC134365|H2AFB2|474381|H2A histone family, member B2##HQ258044|H2AFB3|83740|H2A histone family, member B3##BC101415|H2AFB3|83740|H2A histone family, member B3##BC101417|H2AFB3|83740|H2A histone family, member B3##BC101418|H2AFB3|83740|H2A histone family, member B3##BC128034|H2AFB1|474382|H2A histone family, member B1##CR542230|H2AFB1|474382|H2A histone family, member B1##FN811132|F8|2157|coagulation factor VIII, procoagulant component##AX746360|F8|2157|coagulation factor VIII, procoagulant component##X01179|F8|2157|coagulation factor VIII, procoagulant component##K01740|F8|2157|coagulation factor VIII, procoagulant component##AK292902|F8|2157|coagulation factor VIII, procoagulant component##M14113|F8|2157|coagulation factor VIII, procoagulant component##NM_000132|F8|2157|coagulation factor VIII, procoagulant component##AK307726|F8|2157|coagulation factor VIII, procoagulant component##NM_023934|FUNDC2|65991|FUN14 domain containing 2##AJ272054|FUNDC2|65991|FUN14 domain containing 2##BC000255|FUNDC2|65991|FUN14 domain containing 2##AF320778|FUNDC2|65991|FUN14 domain containing 2##AK313143|FUNDC2|65991|FUN14 domain containing 2##BC072685|FUNDC2|65991|FUN14 domain containing 2##BC108657|FUNDC2|65991|FUN14 domain containing 2##AM393227|FUNDC2|65991|FUN14 domain containing 2##AM393536|FUNDC2|65991|FUN14 domain containing 2##AY032594|FUNDC2|65991|FUN14 domain containing 2##AK295164|F8|2157|coagulation factor VIII, procoagulant component	0.496902	CTCF.p2:-23:0.497
chr1	32170915	32171017	reg1016933.p2	7.890	+	TSC_hg19_v1_chr1_-_32169619 NM_001856	-1273	-	M92642 TSC_hg19_v1_chr1_-_32169608	-1384	-	NM_012392	-60129	-	AB005298 NM_001703	58675	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	93274	-	TSC_hg19_v1_chr1_-_32264318 AK095829	93355	-	NM_001856|COL16A1|1307|collagen, type XVI, alpha 1##M92642|COL16A1|1307|collagen, type XVI, alpha 1##NM_012392|PEF1|553115|penta-EF-hand domain containing 1##AB005298|BAI2|576|brain-specific angiogenesis inhibitor 2##NM_001703|BAI2|576|brain-specific angiogenesis inhibitor 2##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1	0.0	
chr6	170964609	170964729	reg1020436.p1	7.890	+	AY948416 AY948417 AB587415 DQ893475 DQ896345 TSC_hg19_v1_chr6_-_170893696 S78085 BC082978 AK297343 BC008378 NM_001199462 NM_001199463 NM_001199464 BC067759 NM_001199461 NM_002598 NM_144781	-70940	-	NM_001172085 NM_003194 AK304648 TSC_hg19_v1_chr6_+_170863459 AK315222 BC110341 Z22828 AK298272 M55654 BC109054 BC109053	-101205	+	TSC_hg19_v1_chr6_-_170862392 AK058050 NM_002793	-102272	-	None	None	None	None	None	None	None	None	None	AY948416|PDCD2|5134|programmed cell death 2##AY948417|PDCD2|5134|programmed cell death 2##DQ893475|PDCD2|5134|programmed cell death 2##DQ896345|PDCD2|5134|programmed cell death 2##S78085|PDCD2|5134|programmed cell death 2##AK297343|PDCD2|5134|programmed cell death 2##BC008378|PDCD2|5134|programmed cell death 2##NM_001199462|PDCD2|5134|programmed cell death 2##NM_001199463|PDCD2|5134|programmed cell death 2##NM_001199464|PDCD2|5134|programmed cell death 2##BC067759|PDCD2|5134|programmed cell death 2##NM_001199461|PDCD2|5134|programmed cell death 2##NM_002598|PDCD2|5134|programmed cell death 2##NM_144781|PDCD2|5134|programmed cell death 2##NM_001172085|TBP|6908|TATA box binding protein##NM_003194|TBP|6908|TATA box binding protein##AK304648|TBP|6908|TATA box binding protein##AK315222|TBP|6908|TATA box binding protein##BC110341|TBP|6908|TATA box binding protein##Z22828|TBP|6908|TATA box binding protein##AK298272|TBP|6908|TATA box binding protein##M55654|TBP|6908|TATA box binding protein##BC109054|TBP|6908|TATA box binding protein##BC109053|TBP|6908|TATA box binding protein##AK058050|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##NM_002793|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1	0.283133	CTCF.p2:-17:0.283
chr11	76903206	76903358	reg1019819.p1	7.889	+	TSC_hg19_v1_chr11_+_76883833 BC023212	-19434	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	-63954	+	CU686775 BC069115 BC069365 NM_006189	-89398	+	AY313782 AY326450 NM_182833	95180	-	TSC_hg19_v1_chr11_-_77122998 AK296006 AK055228	219717	-	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	281550	-	BC023212|MYO7A|4647|myosin VIIA##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA##BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein##AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AK296006|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK055228|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	1.828447	CTCF.p2:-1:0.972	CTCF.p2:-87:0.857
chr1	154451233	154451380	reg1018100.p1	7.888	+	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	-73232	+	AK223582 BC132684 BC132686 TSC_hg19_v1_chr1_+_154377856	-73454	+	NM_000565 NM_001206866 NM_181359 X12830 BC089410 TSC_hg19_v1_chr1_+_154377822	-73556	+	BC143765 BC117210 NM_001010846	23218	-	BC044864 NM_001098475 NM_182499	23388	+	BC107057 AY112698 TSC_hg19_v1_chr1_-_154531132 AY948200 NM_017582	79803	-	AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor##AK223582|IL6R|3570|interleukin 6 receptor##BC132684|IL6R|3570|interleukin 6 receptor##BC132686|IL6R|3570|interleukin 6 receptor##NM_000565|IL6R|3570|interleukin 6 receptor##NM_001206866|IL6R|3570|interleukin 6 receptor##NM_181359|IL6R|3570|interleukin 6 receptor##X12830|IL6R|3570|interleukin 6 receptor##BC089410|IL6R|3570|interleukin 6 receptor##BC143765|SHE|126669|Src homology 2 domain containing E##BC117210|SHE|126669|Src homology 2 domain containing E##NM_001010846|SHE|126669|Src homology 2 domain containing E##BC044864|TDRD10|126668|tudor domain containing 10##NM_001098475|TDRD10|126668|tudor domain containing 10##NM_182499|TDRD10|126668|tudor domain containing 10##BC107057|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY112698|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY948200|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##NM_017582|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1	0.995941	CTCF.p2:31:0.996
chr16	4033139	4033245	reg1016439.p2	7.888	+	TSC_hg19_v1_chr16_-_3930715 U85962	-102475	-	TSC_hg19_v1_chr16_-_3930711 U47741	-102494	-	AB210043 NM_001079846 NM_004380	-103072	-	BC136657 BC136658 TSC_hg19_v1_chr16_-_4165831	132627	-	BC151207 AB011092 BC151229 TSC_hg19_v1_chr16_-_4166045	132842	-	AJ133123 NM_001116 TSC_hg19_v1_chr16_-_4166252	133038	-	U85962|CREBBP|1387|CREB binding protein##U47741|CREBBP|1387|CREB binding protein##AB210043|CREBBP|1387|CREB binding protein##NM_001079846|CREBBP|1387|CREB binding protein##NM_004380|CREBBP|1387|CREB binding protein##BC136657|ADCY9|115|adenylate cyclase 9##BC136658|ADCY9|115|adenylate cyclase 9##BC151207|ADCY9|115|adenylate cyclase 9##AB011092|ADCY9|115|adenylate cyclase 9##BC151229|ADCY9|115|adenylate cyclase 9##AJ133123|ADCY9|115|adenylate cyclase 9##NM_001116|ADCY9|115|adenylate cyclase 9	0.944622	CTCF.p2:-7:0.945
chr1	6550059	6550158	reg1015022.p2	7.888	+	AB097001 NM_001042665 TSC_hg19_v1_chr1_-_6546016	-4094	-	TSC_hg19_v1_chr1_-_6545530 AK299523	-4583	-	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	-23906	-	BC015231 NM_001042664	526	-	AK024676 NM_020631	1651	-	TSC_hg19_v1_chr1_-_6557448 AK125550	7343	-	AB097001|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_001042665|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##AK299523|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC015231|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_001042664|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##AK024676|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_020631|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##AK125550|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	0.995696	CTCF.p2:0:0.996
chr4	186226257	186226379	reg1015978.p1	7.888	+	NM_031953	-95035	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	-101174	-	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	-161848	+	AB037746 BC152444 NM_018409 AL161975	73843	-	TSC_hg19_v1_chr4_+_186317840 AY296056 NM_181726	91521	+	TSC_hg19_v1_chr4_+_186317892 BC088376	91577	+	NM_031953|SNX25|83891|sorting nexin 25##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB037746|LRP2BP|55805|LRP2 binding protein##BC152444|LRP2BP|55805|LRP2 binding protein##NM_018409|LRP2BP|55805|LRP2 binding protein##AL161975|LRP2BP|55805|LRP2 binding protein##AY296056|ANKRD37|353322|ankyrin repeat domain 37##NM_181726|ANKRD37|353322|ankyrin repeat domain 37##BC088376|ANKRD37|353322|ankyrin repeat domain 37	0.932574	CTCF.p2:18:0.933
chr12	62400047	62400154	reg1017220.p1	7.887	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	-2316961	+	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	-2410183	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-3085798	-	BC050347 NM_178539	186483	-	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	254084	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	460479	+	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)	0.997415	CTCF.p2:2:0.997
chr8	4854621	4854767	reg1019814.p1	7.887	+	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	-2400	-	AY017307 TSC_hg19_v1_chr8_-_4852228	-2469	-	AK128880 TSC_hg19_v1_chr8_-_2585966	-2268712	-	TSC_hg19_v1_chr8_-_6264053 BC036625	1409363	-	TSC_hg19_v1_chr8_-_6264070 AK025595 BC024246	1409380	-	NM_001172574 NM_001172575 NM_024596 BC056195 BC030702 AK308387 TSC_hg19_v1_chr8_+_6264158	1409441	+	AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AK025595|LOC100287015|100287015|uncharacterized LOC100287015##NM_001172574|MCPH1|79648|microcephalin 1##NM_001172575|MCPH1|79648|microcephalin 1##NM_024596|MCPH1|79648|microcephalin 1##BC056195|MCPH1|79648|microcephalin 1##BC030702|MCPH1|79648|microcephalin 1##AK308387|MCPH1|79648|microcephalin 1	0.978903	CTCF.p2:17:0.979
chr10	86112142	86112265	reg1019484.p1	7.886	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-23809	+	BX641033 NM_001012720 NM_001012722 NM_002921 U14910 BC011349 BC008094 BC042536 CU675929 DQ892074 DQ895267	-107376	+	AB463829 AB031547 NM_015613 DQ426882 DQ426881	-110936	-	AB032954 TSC_hg19_v1_chr10_+_86131668	19415	+	TSC_hg19_v1_chr10_+_86184685 AK294321	72492	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	2014060	-	NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##BX641033|RGR|5995|retinal G protein coupled receptor##NM_001012720|RGR|5995|retinal G protein coupled receptor##NM_001012722|RGR|5995|retinal G protein coupled receptor##NM_002921|RGR|5995|retinal G protein coupled receptor##U14910|RGR|5995|retinal G protein coupled receptor##BC011349|RGR|5995|retinal G protein coupled receptor##BC008094|RGR|5995|retinal G protein coupled receptor##BC042536|RGR|5995|retinal G protein coupled receptor##DQ892074|RGR|5995|retinal G protein coupled receptor##DQ895267|RGR|5995|retinal G protein coupled receptor##AB031547|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##NM_015613|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##AB032954|FAM190B|54462|family with sequence similarity 190, member B##AK294321|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1	0.962995	CTCF.p2:-14:0.963
chr12	13687837	13687963	reg1018231.p1	7.886	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-338171	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-338183	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-338262	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	445086	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	830735	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	850372	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.982756	CTCF.p2:2:0.983
chr17	40995514	40995624	reg1018011.p1	7.886	+	TSC_hg19_v1_chr17_+_40985461 BC002684 AK074999 AK303211 U11292 BC008020 AB528620 DQ891930 DQ895117 CU678118 BT019386 CR541745	-10023	+	BX640801 TSC_hg19_v1_chr17_+_40985434 AK292618	-10131	+	TSC_hg19_v1_chr17_+_40985425 AK307110 BC001423	-10140	+	TSC_hg19_v1_chr17_+_40996596 DQ426861 NM_001158 NM_009590 BC142641 AF081363 D88213	1037	+	TSC_hg19_v1_chr17_+_41003229 NM_003734 U39447 BC036368 AK315129 BC050549 AF067406	7663	+	CU690716 TSC_hg19_v1_chr17_+_41003393	7807	+	BC002684|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##AK074999|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##AK303211|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##U11292|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##BC008020|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##DQ891930|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##DQ895117|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##BT019386|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##CR541745|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##BX640801|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##AK292618|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##AK307110|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##BC001423|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##NM_001158|AOC2|314|amine oxidase, copper containing 2 (retina-specific)##NM_009590|AOC2|314|amine oxidase, copper containing 2 (retina-specific)##BC142641|AOC2|314|amine oxidase, copper containing 2 (retina-specific)##AF081363|AOC2|314|amine oxidase, copper containing 2 (retina-specific)##D88213|AOC2|314|amine oxidase, copper containing 2 (retina-specific)##NM_003734|AOC3|8639|amine oxidase, copper containing 3 (vascular adhesion protein 1)##U39447|AOC3|8639|amine oxidase, copper containing 3 (vascular adhesion protein 1)##BC036368|AOC3|8639|amine oxidase, copper containing 3 (vascular adhesion protein 1)##AK315129|AOC3|8639|amine oxidase, copper containing 3 (vascular adhesion protein 1)##BC050549|AOC3|8639|amine oxidase, copper containing 3 (vascular adhesion protein 1)##AF067406|AOC3|8639|amine oxidase, copper containing 3 (vascular adhesion protein 1)	0.539314	CTCF.p2:3:0.539
chr1	75699145	75699321	reg1017889.p1	7.886	+	NM_001001933 BC040321	-105114	+	NM_001130042 NM_001130043 NM_001134759 NM_001889	-500142	-	NM_001162916 AK098237 BC071765 NM_138467 AK294264 AK299849 BC009514 AK311272 AB590606	-500353	+	AK128063 BC028743 BC034580 BC051740 NM_001130058 NM_152697 AK093170 AX747970	377548	-	AK299573 TSC_hg19_v1_chr1_-_76081791	382513	-	NM_000016 NM_001127328 TSC_hg19_v1_chr1_+_76190106	490841	+	NM_001001933|LHX8|431707|LIM homeobox 8##BC040321|LHX8|431707|LIM homeobox 8##NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001162916|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK098237|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC071765|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##NM_138467|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK294264|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK299849|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC009514|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK311272|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK128063|SLC44A5|204962|solute carrier family 44, member 5##BC028743|SLC44A5|204962|solute carrier family 44, member 5##BC034580|SLC44A5|204962|solute carrier family 44, member 5##BC051740|SLC44A5|204962|solute carrier family 44, member 5##NM_001130058|SLC44A5|204962|solute carrier family 44, member 5##NM_152697|SLC44A5|204962|solute carrier family 44, member 5##AK093170|SLC44A5|204962|solute carrier family 44, member 5##AK299573|SLC44A5|204962|solute carrier family 44, member 5##NM_000016|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##NM_001127328|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain	0.980738	CTCF.p2:-32:0.981
chr19	2253241	2253345	reg1017480.p1	7.886	+	NM_000479	-4181	+	NM_007165 TSC_hg19_v1_chr19_+_2236834 AK314815 BC009903 BC041763 BC004434 BC015804	-16455	+	TSC_hg19_v1_chr19_-_2236650 AK098725	-16638	-	AK056978 NM_144616	3125	-	TSC_hg19_v1_chr19_+_2269523 AK307221 NM_004152 AK309122	16227	+	TSC_hg19_v1_chr19_+_2269526 BC042364	16233	+	NM_000479|AMH|268|anti-Mullerian hormone##NM_007165|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##AK314815|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##BC009903|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##BC004434|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##BC015804|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##AK098725|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK056978|JSRP1|126306|junctional sarcoplasmic reticulum protein 1##NM_144616|JSRP1|126306|junctional sarcoplasmic reticulum protein 1##AK307221|OAZ1|4946|ornithine decarboxylase antizyme 1##NM_004152|OAZ1|4946|ornithine decarboxylase antizyme 1##AK309122|SPPL2B|56928|signal peptide peptidase-like 2B##BC042364|OAZ1|4946|ornithine decarboxylase antizyme 1	0.104566	
chr4	11722042	11722164	reg1017398.p1	7.886	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-291571	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-1035702	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-1263093	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	1763848	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	1763872	-	AB463932 AF009801 EU446467 BC111966 NM_001189	1823972	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.0	
chr5	126137784	126137888	reg1016213.p2	7.886	+	TSC_hg19_v1_chr5_+_126113050 AB527547 DQ891592 EU176582 CU680274	-24712	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	-24954	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	-25005	+	BC146948 BC146964 AF055007 TSC_hg19_v1_chr5_-_126366251 BC047569 AK290129	228339	-	NM_178450	228603	-	AK126569 NM_001164478 NM_001164479	271341	-	DQ891592|LMNB1|4001|lamin B1##EU176582|LMNB1|4001|lamin B1##AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1##BC146948|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146964|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AF055007|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC047569|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK290129|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63	0.014918	
chr9	19493226	19493354	reg1017048.p1	7.886	+	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-84287	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-113063	-	TSC_hg19_v1_chr9_-_19378815 BC035447	-114424	-	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	293661	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	1129158	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	1129206	-	AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##BC035447|RPS6|6194|ribosomal protein S6##BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	0.998201	CTCF.p2:-15:0.998
chr15	58024865	58024996	reg1015569.p1	7.885	+	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	-25950	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	-26044	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	-140765	+	AB015228 AB015227 NM_170697	281309	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	332948	-	NM_001206897 NM_003888 NM_170696	333190	-	AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	0.960416	CTCF.p2:-13:0.960
chr11	84095820	84095921	reg1014476.p1	7.884	+	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	-67489	-	AK294375 AK126776 AK295624 NM_001142700	-111594	-	AK299778 CR933674 NM_001142702	-702419	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	538362	-	U32376 AB209252 AK295094 NM_001364	538580	-	CR749820 NM_001142699	1242443	-	AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)##U32376|DLG2|1740|discs, large homolog 2 (Drosophila)##AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)##CR749820|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142699|DLG2|1740|discs, large homolog 2 (Drosophila)	0.980646	CTCF.p2:3:0.981
chr8	114450034	114450172	reg1016606.p1	7.884	+	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	-974	-	AB114605 NM_198124	-60722	-	BC028739 AK313469 AF167082 NM_014379 AK297393	-3463137	-	TSC_hg19_v1_chr8_-_116680208 AK304046	2230117	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	2231062	-	TSC_hg19_v1_chr8_-_116681365 AF183810	2231232	-	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I	0.998866	CTCF.p2:4:0.999
chr14	24032070	24032188	reg1015323.p1	7.883	+	AK310524 TSC_hg19_v1_chr14_-_24025427	-6691	-	TSC_hg19_v1_chr14_+_24025262 NM_001126339 NM_024328 BX161435 AK098604 AK057691 BC002984	-6787	+	BC131533 TSC_hg19_v1_chr14_-_24020861 AB028979 NM_033400	-11309	-	BX247963 BC051833 TSC_hg19_v1_chr14_-_24036719 AK304682 AK310451	4513	-	TSC_hg19_v1_chr14_-_24036998 BX161425 AB015318 AK307696 AK309103	4872	-	AF068706 NM_003917	5143	-	NM_001126339|THTPA|79178|thiamine triphosphatase##NM_024328|THTPA|79178|thiamine triphosphatase##BX161435|THTPA|79178|thiamine triphosphatase##AK098604|THTPA|79178|thiamine triphosphatase##AK057691|THTPA|79178|thiamine triphosphatase##BC002984|THTPA|79178|thiamine triphosphatase##BC131533|ZFHX2|85446|zinc finger homeobox 2##AB028979|ZFHX2|85446|zinc finger homeobox 2##NM_033400|ZFHX2|85446|zinc finger homeobox 2##BX247963|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##BC051833|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK304682|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK310451|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##BX161425|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AB015318|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK307696|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK309103|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AF068706|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##NM_003917|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit	0.999951	CTCF.p2:-8:1.000
chr18	7177264	7177371	reg1016237.p1	7.883	+	BC144590 NM_005559 X58531	-59533	-	NM_001010000 BX648684 AK308259 AK302026	-342852	+	NM_001243517	-665903	+	NM_001105581	53819	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	390000	+	TSC_hg19_v1_chr18_+_7946885 AK294492	769589	+	BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M	0.0	
chr2	32779032	32779149	reg1016711.p1	7.883	+	TSC_hg19_v1_chr2_+_32582308 AF265555	-196780	+	TSC_hg19_v1_chr2_+_32582131 NM_016252	-196977	+	TSC_hg19_v1_chr2_+_32502989 AB072898 BC004875	-276060	+	NM_001193509 NM_017735 AK299196 BC063791 TSC_hg19_v1_chr2_+_32853177 AK027570	74044	+	NM_206943	393278	+	TSC_hg19_v1_chr2_+_33359657 NM_000627 NM_001166264 NM_001166265 NM_001166266 AB208801 BC130289 BC144127 BC144128 M34057 AB384737 AF489528	580615	+	AF265555|BIRC6|57448|baculoviral IAP repeat containing 6##NM_016252|BIRC6|57448|baculoviral IAP repeat containing 6##AB072898|YIPF4|84272|Yip1 domain family, member 4##BC004875|YIPF4|84272|Yip1 domain family, member 4##NM_001193509|TTC27|55622|tetratricopeptide repeat domain 27##NM_017735|TTC27|55622|tetratricopeptide repeat domain 27##AK299196|TTC27|55622|tetratricopeptide repeat domain 27##BC063791|TTC27|55622|tetratricopeptide repeat domain 27##AK027570|TTC27|55622|tetratricopeptide repeat domain 27##NM_206943|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1##AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1##M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1##AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1	0.966985	CTCF.p2:20:0.967
chr4	164477623	164477726	reg1001163.p2	7.883	+	TSC_hg19_v1_chr4_+_164415868 BC011842	-61801	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-61832	+	TSC_hg19_v1_chr4_+_164415817 BC017418 AK298235	-61858	+	AB463878 AK000675 AK301408 NM_017923	57041	-	NM_012403	641188	-	AK289711 NM_001166373	826732	-	BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##BC017418|C4orf43|55319|chromosome 4 open reading frame 43##AK298235|C4orf43|55319|chromosome 4 open reading frame 43##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	0.0	
chr9	111612735	111612856	reg1018580.p1	7.883	+	TSC_hg19_v1_chr9_-_110252048 NM_004235	-1360749	-	AF105036 AF022184 TSC_hg19_v1_chr9_-_110251847 U70663	-1360955	-	HM026463 CU688792 CU689020 DQ891793 DQ894975 AB385001 TSC_hg19_v1_chr9_-_110251402 BC030811 BC029923 AK313489	-1361347	-	CU689742 TSC_hg19_v1_chr9_-_111618267 BC033789 AK313871 NM_006686	5446	-	BC014610 AK314981 NM_006687	11778	+	BC033094 TSC_hg19_v1_chr9_-_111696232 CR749385 AK304742	83446	-	NM_004235|KLF4|9314|Kruppel-like factor 4 (gut)##AF105036|KLF4|9314|Kruppel-like factor 4 (gut)##AF022184|KLF4|9314|Kruppel-like factor 4 (gut)##U70663|KLF4|9314|Kruppel-like factor 4 (gut)##HM026463|KLF4|9314|Kruppel-like factor 4 (gut)##DQ891793|KLF4|9314|Kruppel-like factor 4 (gut)##DQ894975|KLF4|9314|Kruppel-like factor 4 (gut)##BC030811|KLF4|9314|Kruppel-like factor 4 (gut)##BC029923|KLF4|9314|Kruppel-like factor 4 (gut)##AK313489|KLF4|9314|Kruppel-like factor 4 (gut)##BC033789|ACTL7B|10880|actin-like 7B##AK313871|ACTL7B|10880|actin-like 7B##NM_006686|ACTL7B|10880|actin-like 7B##BC014610|ACTL7A|10881|actin-like 7A##AK314981|ACTL7A|10881|actin-like 7A##NM_006687|ACTL7A|10881|actin-like 7A##BC033094|IKBKAP|8518|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein##CR749385|IKBKAP|8518|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein##AK304742|IKBKAP|8518|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein	0.331467	CTCF.p2:-29:0.331
chr11	72394889	72395008	reg1017032.p1	7.882	+	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	-9495	-	AY495087 NM_001146209	-14841	-	TSC_hg19_v1_chr11_-_72353458 AY495089 AK131525 AK092278 AX747449 NM_001143839 NM_001243784	-41469	-	AB018325 NM_001135190 NM_015242	38442	-	TSC_hg19_v1_chr11_-_72463454 AY553630 NM_001040118	68518	-	AB209473 AK095668 BC035482 BC007919 BC014033 AK310301 AK315255 NM_006645	109748	-	U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK131525|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK092278|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001143839|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001243784|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AB018325|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_001135190|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_015242|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##AY553630|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_001040118|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##AK095668|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC035482|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC007919|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC014033|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AK315255|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##NM_006645|STARD10|10809|StAR-related lipid transfer (START) domain containing 10	0.717325	CTCF.p2:13:0.717
chr14	71870531	71870637	reg1016443.p1	7.882	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-496133	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-496451	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-594775	-	AF090989 AF090990 NM_015556	125457	+	AK294895 NM_001204423	528232	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	528569	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.0	
chr4	141281373	141281499	reg1009257.p2	7.882	+	NM_001153446 NM_001153635 BC062684 NM_001153585 NM_001153690	-16831	+	AK027797 NM_032547	-102997	+	NM_018717 TSC_hg19_v1_chr4_-_141075339	-206104	-	NM_001153484 NM_001153552 NM_001153663 TSC_hg19_v1_chr4_+_141294715	13260	+	TSC_hg19_v1_chr4_+_141294799 AF330205 AF448857 AB015335	13332	+	TSC_hg19_v1_chr4_+_141294802 BC016511	13379	+	NM_001153446|SCOC|60592|short coiled-coil protein##NM_001153635|SCOC|60592|short coiled-coil protein##BC062684|SCOC|60592|short coiled-coil protein##NM_001153585|SCOC|60592|short coiled-coil protein##NM_001153690|SCOC|60592|short coiled-coil protein##AK027797|SCOC|60592|short coiled-coil protein##NM_032547|SCOC|60592|short coiled-coil protein##NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)##NM_001153484|SCOC|60592|short coiled-coil protein##NM_001153552|SCOC|60592|short coiled-coil protein##NM_001153663|SCOC|60592|short coiled-coil protein##AF330205|SCOC|60592|short coiled-coil protein##AF448857|SCOC|60592|short coiled-coil protein##AB015335|SCOC|60592|short coiled-coil protein##BC016511|SCOC|60592|short coiled-coil protein	0.995126	CTCF.p2:-10:0.995
chrX	49603157	49603277	reg1017539.p2	7.882	+	NM_007003 AK312039 AF275258 AJ005894 AK092503 AX747575	-9290	+	BC004861 AF058989 NM_003785	-142636	-	NM_001040663 NM_001468 BC005363 BC036094 BC069470	-239578	+	NM_001145073	41252	+	TSC_hg19_v1_chrX_+_49687274 AK092049 NM_001127898 NM_001127899 AK056560	84029	+	NM_000084 AK308089 TSC_hg19_v1_chrX_+_49832243 AK290940	229028	+	NM_007003|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK312039|PAGE4|9506|P antigen family, member 4 (prostate associated)##AF275258|PAGE4|9506|P antigen family, member 4 (prostate associated)##AJ005894|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK092503|PAGE4|9506|P antigen family, member 4 (prostate associated)##BC004861|PAGE1|8712|P antigen family, member 1 (prostate associated)##AF058989|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_003785|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_001040663|GAGE1|2543|G antigen 1##NM_001468|GAGE1|2543|G antigen 1##BC005363|GAGE1|2543|G antigen 1##BC036094|GAGE1|2543|G antigen 1##BC069470|GAGE1|2543|G antigen 1##NM_001145073|USP27X|389856|ubiquitin specific peptidase 27, X-linked##AK092049|CLCN5|1184|chloride channel 5##NM_001127898|CLCN5|1184|chloride channel 5##NM_001127899|CLCN5|1184|chloride channel 5##AK056560|CLCN5|1184|chloride channel 5##NM_000084|CLCN5|1184|chloride channel 5##AK308089|CLCN5|1184|chloride channel 5##AK290940|CLCN5|1184|chloride channel 5	0.98501	CTCF.p2:-6:0.985
chr4	175286298	175286452	reg1015699.p1	7.881	+	BC014903 NM_012180 AK123740	-80968	-	TSC_hg19_v1_chr4_+_175205073 NM_001145314 BC038667 AB051499 AK094961 AK292484	-81262	+	NM_001040157 TSC_hg19_v1_chr4_+_175204877	-81515	+	U63296 X82460 BC007691 BC018986 J05594 L76465 AK058013 AK300940 AK314624 AK300125 TSC_hg19_v1_chr4_-_175443639	157245	-	AK300524 NM_000860 NM_001145816	157416	-	U93917 BC036086 NM_001042543 NM_006529	464045	-	BC014903|FBXO8|26269|F-box protein 8##NM_012180|FBXO8|26269|F-box protein 8##AK123740|FBXO8|26269|F-box protein 8##NM_001145314|CEP44|80817|centrosomal protein 44kDa##BC038667|CEP44|80817|centrosomal protein 44kDa##AB051499|CEP44|80817|centrosomal protein 44kDa##AK094961|CEP44|80817|centrosomal protein 44kDa##AK292484|CEP44|80817|centrosomal protein 44kDa##NM_001040157|CEP44|80817|centrosomal protein 44kDa##U63296|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##X82460|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC007691|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC018986|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##J05594|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##L76465|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK058013|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300940|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK314624|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300125|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##U93917|GLRA3|8001|glycine receptor, alpha 3##BC036086|GLRA3|8001|glycine receptor, alpha 3##NM_001042543|GLRA3|8001|glycine receptor, alpha 3##NM_006529|GLRA3|8001|glycine receptor, alpha 3	0.968783	CTCF.p2:-24:0.969
chr3	39458985	39459087	reg1017360.p1	7.880	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	-9894	+	BC070263 NM_002295 TSC_hg19_v1_chr3_+_39448210 BC066941 BC107567 BC005391 BC062714 D28372 AF503367 BC013827 BC050688 X15005 BC034537 BC053370 BC071968 BC010418 BC071693 BC018867 BC071969 BC073863	-10826	+	TSC_hg19_v1_chr3_+_39424860 NM_017875 AK000558 AK225388 BC013194 CR457242	-34046	+	NM_182935 BC075796 AK127034 AK290187 BC022471	50083	+	TSC_hg19_v1_chr3_+_39851138 BC092512 AK126013 AF396687 NM_015460 BC109311 BC109312	392139	+	BC031275 AK057627 AK309874 AK309698 TSC_hg19_v1_chr3_-_40351022 BC045736 BC118565 BC106900	892032	-	BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA##BC070263|RPSA|3921|ribosomal protein SA##NM_002295|RPSA|3921|ribosomal protein SA##BC066941|RPSA|3921|ribosomal protein SA##BC107567|RPSA|3921|ribosomal protein SA##BC005391|RPSA|3921|ribosomal protein SA##BC062714|RPSA|3921|ribosomal protein SA##AF503367|RPSA|3921|ribosomal protein SA##BC013827|RPSA|3921|ribosomal protein SA##BC050688|RPSA|3921|ribosomal protein SA##X15005|RPSA|3921|ribosomal protein SA##BC034537|RPSA|3921|ribosomal protein SA##BC053370|RPSA|3921|ribosomal protein SA##BC071968|RPSA|3921|ribosomal protein SA##BC010418|RPSA|3921|ribosomal protein SA##BC071693|RPSA|3921|ribosomal protein SA##BC018867|RPSA|3921|ribosomal protein SA##BC071969|RPSA|3921|ribosomal protein SA##BC073863|RPSA|3921|ribosomal protein SA##NM_017875|SLC25A38|54977|solute carrier family 25, member 38##AK000558|SLC25A38|54977|solute carrier family 25, member 38##AK225388|SLC25A38|54977|solute carrier family 25, member 38##BC013194|SLC25A38|54977|solute carrier family 25, member 38##CR457242|SLC25A38|54977|solute carrier family 25, member 38##NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC092512|MYRIP|25924|myosin VIIA and Rab interacting protein##AK126013|MYRIP|25924|myosin VIIA and Rab interacting protein##AF396687|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_015460|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109311|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109312|MYRIP|25924|myosin VIIA and Rab interacting protein##BC031275|FLJ33065|440952|uncharacterized LOC440952##AK057627|FLJ33065|440952|uncharacterized LOC440952##AK309874|FLJ33065|440952|uncharacterized LOC440952##BC045736|FLJ33065|440952|uncharacterized LOC440952##BC118565|FLJ33065|440952|uncharacterized LOC440952##BC106900|FLJ33065|440952|uncharacterized LOC440952	0.830068	CTCF.p2:-7:0.830
chr7	10452178	10452293	reg1016066.p1	7.880	+	AK315141 TSC_hg19_v1_chr7_+_8474016 AK091655 BC047505 AK296248	-1978115	+	AB047362 AB073665 NM_152745 TSC_hg19_v1_chr7_+_8473633	-1978625	+	TSC_hg19_v1_chr7_+_8473238 AK095624	-1978997	+	CR407618 CR541716 TSC_hg19_v1_chr7_-_10979730 AF201077 BC101794 BC101796	527474	-	AK130950 TSC_hg19_v1_chr7_-_10979760 AK024837 U94586 BC105295 NM_002489	527549	-	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	561275	+	AK315141|NXPH1|30010|neurexophilin 1##AK091655|NXPH1|30010|neurexophilin 1##BC047505|NXPH1|30010|neurexophilin 1##AK296248|NXPH1|30010|neurexophilin 1##AB047362|NXPH1|30010|neurexophilin 1##AB073665|NXPH1|30010|neurexophilin 1##NM_152745|NXPH1|30010|neurexophilin 1##AK095624|NXPH1|30010|neurexophilin 1##CR407618|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR541716|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AF201077|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101794|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101796|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK130950|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK024837|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##U94586|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC105295|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_002489|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14	0.994864	CTCF.p2:6:0.995
chr9	35736223	35736333	reg1017367.p1	7.880	+	TSC_hg19_v1_chr9_+_35732662 BC009402 BC010158 AF009368 AB463457 CU679643 EU446868 FJ263669	-3579	+	TSC_hg19_v1_chr9_+_35732598 U88528 AK313635 AK299781	-3717	+	TSC_hg19_v1_chr9_-_35732400 NM_006289	-3884	-	TSC_hg19_v1_chr9_-_35749005 AK027884 AL834306	12674	-	TSC_hg19_v1_chr9_-_35749193 BC011363	12891	-	TSC_hg19_v1_chr9_-_35749226 AB046825 AJ309567 NM_020944	12945	-	BC009402|CREB3|10488|cAMP responsive element binding protein 3##BC010158|CREB3|10488|cAMP responsive element binding protein 3##AF009368|CREB3|10488|cAMP responsive element binding protein 3##EU446868|CREB3|10488|cAMP responsive element binding protein 3##FJ263669|CREB3|10488|cAMP responsive element binding protein 3##U88528|CREB3|10488|cAMP responsive element binding protein 3##AK313635|CREB3|10488|cAMP responsive element binding protein 3##AK299781|CREB3|10488|cAMP responsive element binding protein 3##NM_006289|TLN1|7094|talin 1##AK027884|GBA2|57704|glucosidase, beta (bile acid) 2##AL834306|GBA2|57704|glucosidase, beta (bile acid) 2##BC011363|GBA2|57704|glucosidase, beta (bile acid) 2##AB046825|GBA2|57704|glucosidase, beta (bile acid) 2##AJ309567|GBA2|57704|glucosidase, beta (bile acid) 2##NM_020944|GBA2|57704|glucosidase, beta (bile acid) 2	0.232987	CTCF.p2:3:0.233
chr5	59096035	59096145	reg1015664.p2	7.879	+	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	-31635	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	-31742	-	U50159 NM_006203 L20970	-213791	-	NM_001104631	93530	-	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	687814	-	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	687950	+	NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)	0.997405	CTCF.p2:5:0.997
chr10	22242616	22242779	reg1016068.p2	7.878	+	AY598745 CU687346 NM_001195626 AF060929 AF060934 AF060935 AF060936 AF060937 AF060938	-419072	+	TSC_hg19_v1_chr10_+_21823382 AB209755 BC052798 BC094844 BC129946	-419303	+	U13948 TSC_hg19_v1_chr10_+_21823274 BC065376 BC080577	-419421	+	AY225122 AK027263 TSC_hg19_v1_chr10_-_22292522 BC014436	49752	-	TSC_hg19_v1_chr10_-_22292660 BC110894 NM_022365 AK308369	49968	-	NM_001199938	256214	-	AY598745|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##NM_001195626|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060929|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060934|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060935|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060936|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060937|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060938|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AB209755|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC052798|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC094844|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC129946|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##U13948|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC065376|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC080577|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AY225122|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK027263|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC014436|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1	0.975677	CTCF.p2:25:0.976
chr10	63595003	63595117	reg1017800.p1	7.878	+	BC041932 NM_173554	-172342	+	CR749606 NM_178505	-381853	-	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	-382101	-	NM_032199	65952	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	66371	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	214036	+	BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##CR749606|TMEM26|219623|transmembrane protein 26##NM_178505|TMEM26|219623|transmembrane protein 26##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	0.047264	
chr14	77679888	77679995	reg1017832.p1	7.878	+	TSC_hg19_v1_chr14_+_77648137 AK125159 BC136613 BC136614	-31768	+	TSC_hg19_v1_chr14_+_77648082 NM_020431	-31849	+	AK294840 TSC_hg19_v1_chr14_-_77608135 AK095612 NM_174976	-71806	-	TSC_hg19_v1_chr14_-_77737552 AF422797 NM_021257	57660	-	CU689220 AB209114 BC031651 TSC_hg19_v1_chr14_-_77787215 BX248027 AF105020 AY090480 NM_013382	107189	-	NM_145870 NM_145871 AK315154 BC001453 TSC_hg19_v1_chr14_+_77787378 AK309054 AK315609 BC052245 BC069047 AJ001838 U86529 CR456987	107429	+	AK125159|TMEM63C|57156|transmembrane protein 63C##BC136613|TMEM63C|57156|transmembrane protein 63C##BC136614|TMEM63C|57156|transmembrane protein 63C##NM_020431|TMEM63C|57156|transmembrane protein 63C##AK294840|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK095612|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_174976|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AF422797|NGB|58157|neuroglobin##NM_021257|NGB|58157|neuroglobin##AB209114|POMT2|29954|protein-O-mannosyltransferase 2##BC031651|POMT2|29954|protein-O-mannosyltransferase 2##BX248027|POMT2|29954|protein-O-mannosyltransferase 2##AF105020|POMT2|29954|protein-O-mannosyltransferase 2##AY090480|POMT2|29954|protein-O-mannosyltransferase 2##NM_013382|POMT2|29954|protein-O-mannosyltransferase 2##NM_145870|GSTZ1|2954|glutathione transferase zeta 1##NM_145871|GSTZ1|2954|glutathione transferase zeta 1##AK315154|GSTZ1|2954|glutathione transferase zeta 1##BC001453|GSTZ1|2954|glutathione transferase zeta 1##AK309054|GSTZ1|2954|glutathione transferase zeta 1##AK315609|GSTZ1|2954|glutathione transferase zeta 1##BC052245|GSTZ1|2954|glutathione transferase zeta 1##AJ001838|GSTZ1|2954|glutathione transferase zeta 1##U86529|GSTZ1|2954|glutathione transferase zeta 1##CR456987|GSTZ1|2954|glutathione transferase zeta 1	0.016847	
chr19	12457861	12457968	reg1017781.p2	7.878	+	AK313755 BC022523 AK092116 AX747362 NM_145276	-13430	-	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	-52262	-	TSC_hg19_v1_chr19_+_12305871 AK093188 AX721123	-152008	+	AK024418 AK295923 NM_030824	18546	-	TSC_hg19_v1_chr19_-_12512035 BC057831 NM_001080821	54140	-	AK299532 TSC_hg19_v1_chr19_-_12551771	93852	-	AK313755|ZNF563|147837|zinc finger protein 563##BC022523|ZNF563|147837|zinc finger protein 563##AK092116|ZNF563|147837|zinc finger protein 563##NM_145276|ZNF563|147837|zinc finger protein 563##BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44##AK024418|ZNF442|79973|zinc finger protein 442##AK295923|ZNF442|79973|zinc finger protein 442##NM_030824|ZNF442|79973|zinc finger protein 442##NM_001080821|ZNF799|90576|zinc finger protein 799##AK299532|ZNF443|10224|zinc finger protein 443	0.0	
chr3	33925084	33925207	reg1015828.p1	7.878	+	TSC_hg19_v1_chr3_+_33840125 AF250394 GQ131806 AB384596 CU676494 CU686637 BT007367	-84974	+	TSC_hg19_v1_chr3_+_33840120 AF151793 BC020066	-85038	+	TSC_hg19_v1_chr3_+_33840081 BC068454 AF349951	-85062	+	TSC_hg19_v1_chr3_+_35681016 BC041385 AK057559	1755956	+	BC051828 NM_016300	1758703	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	1796051	+	AF250394|PDCD6IP|10015|programmed cell death 6 interacting protein##GQ131806|PDCD6IP|10015|programmed cell death 6 interacting protein##BT007367|PDCD6IP|10015|programmed cell death 6 interacting protein##AF151793|PDCD6IP|10015|programmed cell death 6 interacting protein##BC020066|PDCD6IP|10015|programmed cell death 6 interacting protein##BC068454|PDCD6IP|10015|programmed cell death 6 interacting protein##AF349951|PDCD6IP|10015|programmed cell death 6 interacting protein##BC041385|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK057559|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	0.994927	CTCF.p2:-21:0.995
chr13	22423615	22423746	reg1017691.p1	7.877	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-178532	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-245320	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-245371	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	1331435	+	TSC_hg19_v1_chr13_-_23949652 AK125458	1525970	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	1584160	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.382259	CTCF.p2:0:0.382
chr16	88700051	88700158	reg1014885.p1	7.877	+	TSC_hg19_v1_chr16_+_88636880 BC050463	-63235	+	AK056632 AK225807 TSC_hg19_v1_chr16_+_88636823	-63276	+	AK300254 AK302716 TSC_hg19_v1_chr16_+_88636810	-63294	+	AF152099 AY358471 BC069410 NM_013278 BC101835 BC112196 AF142410	4899	+	AK097127 AK125578 AK300049 AK309030 TSC_hg19_v1_chr16_-_88717462 BT006861 DQ893235 DQ896565 AB590173 BC048338 BC033739 BC006465 BC011565 BC028224 M21186 NM_000101	17345	-	BT006930 AB527587 DQ890562 DQ893724 TSC_hg19_v1_chr16_-_88729519 NM_002461 U49260 AB209229 BC000011	29413	-	BC050463|ZC3H18|124245|zinc finger CCCH-type containing 18##AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18##AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18##AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18##AF152099|IL17C|27189|interleukin 17C##AY358471|IL17C|27189|interleukin 17C##BC069410|IL17C|27189|interleukin 17C##NM_013278|IL17C|27189|interleukin 17C##BC101835|IL17C|27189|interleukin 17C##BC112196|IL17C|27189|interleukin 17C##AK097127|CYBA|1535|cytochrome b-245, alpha polypeptide##AK300049|CYBA|1535|cytochrome b-245, alpha polypeptide##BT006861|CYBA|1535|cytochrome b-245, alpha polypeptide##DQ893235|CYBA|1535|cytochrome b-245, alpha polypeptide##DQ896565|CYBA|1535|cytochrome b-245, alpha polypeptide##BC033739|CYBA|1535|cytochrome b-245, alpha polypeptide##BC006465|CYBA|1535|cytochrome b-245, alpha polypeptide##BC011565|CYBA|1535|cytochrome b-245, alpha polypeptide##BC028224|CYBA|1535|cytochrome b-245, alpha polypeptide##M21186|CYBA|1535|cytochrome b-245, alpha polypeptide##NM_000101|CYBA|1535|cytochrome b-245, alpha polypeptide##BT006930|MVD|4597|mevalonate (diphospho) decarboxylase##DQ890562|MVD|4597|mevalonate (diphospho) decarboxylase##DQ893724|MVD|4597|mevalonate (diphospho) decarboxylase##NM_002461|MVD|4597|mevalonate (diphospho) decarboxylase##U49260|MVD|4597|mevalonate (diphospho) decarboxylase##AB209229|MVD|4597|mevalonate (diphospho) decarboxylase##BC000011|MVD|4597|mevalonate (diphospho) decarboxylase	0.922689	CTCF.p2:-2:0.869
chr2	71204629	71204744	reg1017044.p2	7.877	+	AK291121 NM_001692 BC063411 AK313194 AK301542 BC035978 M25809 AK223151 CU687698 CU690248	-41644	+	TSC_hg19_v1_chr2_+_71127738 BC006336 AB527952 BT007035	-76948	+	TSC_hg19_v1_chr2_+_71127724 NM_012476 Y17791	-76967	+	BC035234 NM_001115116 NM_024933	888	+	BC010656 AK074840 TSC_hg19_v1_chr2_-_71219046	14345	-	AK315543 TSC_hg19_v1_chr2_-_71221930	17196	-	AK291121|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##NM_001692|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC063411|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK313194|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK301542|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC035978|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##M25809|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK223151|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC006336|VAX2|25806|ventral anterior homeobox 2##BT007035|VAX2|25806|ventral anterior homeobox 2##NM_012476|VAX2|25806|ventral anterior homeobox 2##Y17791|VAX2|25806|ventral anterior homeobox 2##BC035234|ANKRD53|79998|ankyrin repeat domain 53##NM_001115116|ANKRD53|79998|ankyrin repeat domain 53##NM_024933|ANKRD53|79998|ankyrin repeat domain 53##BC010656|TEX261|113419|testis expressed 261##AK074840|TEX261|113419|testis expressed 261##AK315543|TEX261|113419|testis expressed 261	0.830068	CTCF.p2:1:0.830
chr9	31542458	31542572	reg1016888.p1	7.877	+	AK056372 NM_152570	-2823213	-	AK057806 JN681271 NM_145005	-3968674	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-3969044	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	842075	+	TSC_hg19_v1_chr9_+_32384622 AK057904	842112	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	842134	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.0	
chr14	78488483	78488595	reg1019302.p1	7.876	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-222089	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-261030	-	NM_001173978 NM_174943 BC107147 BC113929 BC113986	-261295	+	AB018286 BC152457 NM_004796	381553	+	NM_001105250 NM_138970 AK056530 BC059368 BC068469	1257165	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	2189365	-	NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001173978|C14orf178|283579|chromosome 14 open reading frame 178##NM_174943|C14orf178|283579|chromosome 14 open reading frame 178##BC107147|C14orf178|283579|chromosome 14 open reading frame 178##BC113929|C14orf178|283579|chromosome 14 open reading frame 178##BC113986|C14orf178|283579|chromosome 14 open reading frame 178##AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II	0.990593	CTCF.p2:-20:0.991
chr1	175403531	175403658	reg1020753.p1	7.875	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-241564	-	AK127044 NM_022093	-366601	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-411023	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	309116	-	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	772571	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	772724	-	D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2	0.988491	CTCF.p2:3:0.988
chr5	118771297	118771398	reg1017188.p1	7.875	+	TSC_hg19_v1_chr5_+_118691713 AF099935 AK001850 AF099936 CU675493	-79609	+	BC007014 NM_014350 BC005352 TSC_hg19_v1_chr5_+_118691687	-79729	+	AF070671 TSC_hg19_v1_chr5_+_118604523	-166830	+	TSC_hg19_v1_chr5_+_118788215 NM_000414 NM_001199292 AK301212 AK312449 NM_001199291 BC003098 AK293254 AB208932 X87176 AK299685 AK298075 CU678374 DQ891866 DQ895055	16849	+	AF427126 AY692447 NM_001163991 NM_182761 BC040622 BC128242 BC128243	193969	+	BC011941 TSC_hg19_v1_chr5_-_119740564	969203	-	AF099935|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001850|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099936|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC007014|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_014350|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC005352|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF070671|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_000414|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199292|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK301212|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK312449|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199291|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC003098|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK293254|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##X87176|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK299685|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK298075|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ891866|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ895055|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AF427126|FAM170A|340069|family with sequence similarity 170, member A##AY692447|FAM170A|340069|family with sequence similarity 170, member A##NM_001163991|FAM170A|340069|family with sequence similarity 170, member A##NM_182761|FAM170A|340069|family with sequence similarity 170, member A##BC040622|FAM170A|340069|family with sequence similarity 170, member A##BC128242|FAM170A|340069|family with sequence similarity 170, member A##BC128243|FAM170A|340069|family with sequence similarity 170, member A	0.991025	CTCF.p2:0:0.991
chr6	6131853	6131975	reg1015125.p1	7.875	+	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-124217	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	-124773	-	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-870224	+	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	188971	-	TSC_hg19_v1_chr6_-_6320897 NM_000129	188996	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	457036	+	BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86	0.977009	CTCF.p2:11:0.977
chr9	34546993	34547141	reg1017964.p1	7.875	+	TSC_hg19_v1_chr9_-_34522975 BC022101 NM_198573	-24063	-	NM_012144 BC030583 AK290696 AF091619 AK314639 AK303937 AK302186 AK302499 DQ890609 EU176231	-88161	+	TSC_hg19_v1_chr9_-_34458569 AK299882 AK096350 AK123887 AK294054 BC041009 NM_001184940 NM_001184941 NM_001184942 NM_001184943 NM_001184945 NM_147202	-88540	-	TSC_hg19_v1_chr9_-_34589723 BC001492 M73238 NM_001842 NM_147164	42672	-	NM_001207011 TSC_hg19_v1_chr9_-_34590150	43083	-	BC032136 NM_148178 NM_148179	65025	-	BC022101|ENHO|375704|energy homeostasis associated##NM_198573|ENHO|375704|energy homeostasis associated##NM_012144|DNAI1|27019|dynein, axonemal, intermediate chain 1##BC030583|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK290696|DNAI1|27019|dynein, axonemal, intermediate chain 1##AF091619|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK314639|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK303937|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK302186|DNAI1|27019|dynein, axonemal, intermediate chain 1##DQ890609|DNAI1|27019|dynein, axonemal, intermediate chain 1##EU176231|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK299882|C9orf25|203259|chromosome 9 open reading frame 25##AK096350|C9orf25|203259|chromosome 9 open reading frame 25##AK123887|C9orf25|203259|chromosome 9 open reading frame 25##AK294054|C9orf25|203259|chromosome 9 open reading frame 25##BC041009|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184940|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184941|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184942|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184943|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184945|C9orf25|203259|chromosome 9 open reading frame 25##NM_147202|C9orf25|203259|chromosome 9 open reading frame 25##BC001492|CNTFR|1271|ciliary neurotrophic factor receptor##M73238|CNTFR|1271|ciliary neurotrophic factor receptor##NM_001842|CNTFR|1271|ciliary neurotrophic factor receptor##NM_147164|CNTFR|1271|ciliary neurotrophic factor receptor##NM_001207011|CNTFR|1271|ciliary neurotrophic factor receptor##BC032136|C9orf23|138716|chromosome 9 open reading frame 23##NM_148178|C9orf23|138716|chromosome 9 open reading frame 23##NM_148179|C9orf23|138716|chromosome 9 open reading frame 23	0.999831	CTCF.p2:7:1.000
chr1	16531625	16531753	reg1019199.p1	7.874	+	EU826606 DQ895231 EU176326 TSC_hg19_v1_chr1_-_16482565 M59371 BC037166 AK296788 NM_004431	-49163	-	AB463624 CU691488 AK094085 BC037394 TSC_hg19_v1_chr1_-_16400144 BC016848 NM_182623	-131632	-	AK098217 NM_001165945	-156406	+	BC040640 NM_153213 AK091281 AX746893 AK297707	7445	-	NM_030907	31969	-	TSC_hg19_v1_chr1_-_16678922 AK310671	147229	-	EU826606|EPHA2|1969|EPH receptor A2##DQ895231|EPHA2|1969|EPH receptor A2##EU176326|EPHA2|1969|EPH receptor A2##M59371|EPHA2|1969|EPH receptor A2##BC037166|EPHA2|1969|EPH receptor A2##AK296788|EPHA2|1969|EPH receptor A2##NM_004431|EPHA2|1969|EPH receptor A2##AK094085|FAM131C|348487|family with sequence similarity 131, member C##BC037394|FAM131C|348487|family with sequence similarity 131, member C##BC016848|FAM131C|348487|family with sequence similarity 131, member C##NM_182623|FAM131C|348487|family with sequence similarity 131, member C##AK098217|CLCNKB|1188|chloride channel Kb##NM_001165945|CLCNKB|1188|chloride channel Kb##BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##NM_030907|RSG1|79363|REM2 and RAB-like small GTPase 1##AK310671|FBXO42|54455|F-box protein 42	0.337944	CTCF.p2:-15:0.338
chrX	109134241	109134380	reg1018426.p1	7.874	+	TSC_hg19_v1_chrX_-_108976528 AB061713 AK292070 AF030555 NM_004458 NM_022977	-157746	-	TSC_hg19_v1_chrX_-_108976464 Y12777 Y13058 AB061714 BC034959 AK307566 AK294915	-157831	-	DQ891287 DQ894471 DQ896649 DQ896656 DQ896659 DQ896664 EF535525 BC035330 AJ012743 NM_012282 AK223306 AK314923 DQ192294 TSC_hg19_v1_chrX_-_108868398	-265986	-	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	111560	+	TSC_hg19_v1_chrX_+_109246341 NM_032227 AK026332	112030	+	TSC_hg19_v1_chrX_+_109246360 BC085605	112045	+	AB061713|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK292070|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AF030555|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_004458|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_022977|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y12777|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y13058|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061714|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##BC034959|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK307566|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK294915|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##DQ891287|KCNE1L|23630|KCNE1-like##DQ894471|KCNE1L|23630|KCNE1-like##DQ896649|KCNE1L|23630|KCNE1-like##DQ896656|KCNE1L|23630|KCNE1-like##DQ896659|KCNE1L|23630|KCNE1-like##DQ896664|KCNE1L|23630|KCNE1-like##EF535525|KCNE1L|23630|KCNE1-like##BC035330|KCNE1L|23630|KCNE1-like##AJ012743|KCNE1L|23630|KCNE1-like##NM_012282|KCNE1L|23630|KCNE1-like##AK223306|KCNE1L|23630|KCNE1-like##AK314923|KCNE1L|23630|KCNE1-like##DQ192294|KCNE1L|23630|KCNE1-like##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164##NM_032227|TMEM164|84187|transmembrane protein 164##AK026332|TMEM164|84187|transmembrane protein 164##BC085605|TMEM164|84187|transmembrane protein 164	0.98655	CTCF.p2:10:0.987
chr17	48171742	48171892	reg1016097.p1	7.873	+	TSC_hg19_v1_chr17_+_48133357 AB209658 BC150190 BC015344	-38371	+	AK293323 AK303384 NM_002204 NM_005501 TSC_hg19_v1_chr17_+_48133350	-38476	+	BC012361 BC028970 AK075167 TSC_hg19_v1_chr17_-_48072589 AK313257 NM_005220	-99239	-	AK055119 NM_001199898	283	+	TSC_hg19_v1_chr17_+_48172739 NM_001199900 NM_002611 AK297089 BC040478 BC063137 AK290522 AK293600 BC005811 L42451 NM_001199899	993	+	TSC_hg19_v1_chr17_-_48207145 BC142728 BC136485 AY148482 NM_174920 AK291482 AK094209 AK225767 BC141822	35332	-	AB209658|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC150190|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC015344|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AK293323|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AK303384|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##NM_002204|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##NM_005501|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC012361|DLX3|1747|distal-less homeobox 3##BC028970|DLX3|1747|distal-less homeobox 3##AK075167|DLX3|1747|distal-less homeobox 3##AK313257|DLX3|1747|distal-less homeobox 3##NM_005220|DLX3|1747|distal-less homeobox 3##AK055119|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199898|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199900|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_002611|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK297089|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC040478|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC063137|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK290522|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK293600|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC005811|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##L42451|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199899|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC142728|SAMD14|201191|sterile alpha motif domain containing 14##BC136485|SAMD14|201191|sterile alpha motif domain containing 14##AY148482|SAMD14|201191|sterile alpha motif domain containing 14##NM_174920|SAMD14|201191|sterile alpha motif domain containing 14##AK291482|SAMD14|201191|sterile alpha motif domain containing 14##AK094209|SAMD14|201191|sterile alpha motif domain containing 14##AK225767|SAMD14|201191|sterile alpha motif domain containing 14##BC141822|SAMD14|201191|sterile alpha motif domain containing 14	0.962184	CTCF.p2:-5:0.962
chr20	46292637	46292756	reg1017669.p2	7.873	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-162012	+	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	-162074	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-307208	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	122056	-	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	122622	-	AB037836 TSC_hg19_v1_chr20_-_47444291	1151590	-	AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1	0.985003	CTCF.p2:-2:0.985
chr3	27295475	27295578	reg1018004.p1	7.873	+	BC067784 TSC_hg19_v1_chr3_+_26664296 AF396933 NM_052953	-631226	+	TSC_hg19_v1_chr3_+_25831590 NM_001145391 NM_017897 AK000611 AK304821 AK225260 BC008202	-1463946	+	AK296047 NM_001145294	-1464014	-	TSC_hg19_v1_chr3_-_27410884 AK123061 NM_199347	115387	-	AF047033 AF089726 NM_003615	202718	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	230299	-	BC067784|LRRC3B|116135|leucine rich repeat containing 3B##AF396933|LRRC3B|116135|leucine rich repeat containing 3B##NM_052953|LRRC3B|116135|leucine rich repeat containing 3B##NM_001145391|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##NM_017897|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK000611|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK304821|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK225260|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##BC008202|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK296047|NGLY1|55768|N-glycanase 1##NM_001145294|NGLY1|55768|N-glycanase 1##AK123061|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##NM_199347|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7	0.334328	CTCF.p2:-5:0.334
chr6	63485477	63485587	reg1018609.p1	7.872	+	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	-489531	-	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	-5197853	-	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	-6303117	+	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	544332	-	TSC_hg19_v1_chr6_+_64231650 CR749458	746123	+	TSC_hg19_v1_chr6_+_64281913 BC045571 NM_003463	796384	+	AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	0.997134	CTCF.p2:1:0.997
chr14	97651650	97651796	reg1017511.p2	7.871	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-388008	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-682939	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-682977	+	AK098639 NM_182560	1526226	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	2085894	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	2086167	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.997996	CTCF.p2:-14:0.998
chr17	40333444	40333568	reg1017517.p1	7.871	+	TSC_hg19_v1_chr17_-_40333301 AB022698 NM_012285	-231	-	TSC_hg19_v1_chr17_-_40307015 BC114439 BC106039 NM_001252039 NM_004583 NM_201434	-26468	-	TSC_hg19_v1_chr17_-_40307008 AK310234	-26508	-	AB463761 AF041240 NM_001524	3920	-	AK298933 TSC_hg19_v1_chr17_-_40346487 BC022784 AK122777 AK123075 AK307058 BC011056 AK075277 NM_001142622 NM_001142623 NM_032484	12982	-	AK308163 TSC_hg19_v1_chr17_-_40428385	94844	-	AB022698|KCNH4|23415|potassium voltage-gated channel, subfamily H (eag-related), member 4##NM_012285|KCNH4|23415|potassium voltage-gated channel, subfamily H (eag-related), member 4##BC114439|RAB5C|5878|RAB5C, member RAS oncogene family##BC106039|RAB5C|5878|RAB5C, member RAS oncogene family##NM_001252039|RAB5C|5878|RAB5C, member RAS oncogene family##NM_004583|RAB5C|5878|RAB5C, member RAS oncogene family##NM_201434|RAB5C|5878|RAB5C, member RAS oncogene family##AK310234|RAB5C|5878|RAB5C, member RAS oncogene family##AF041240|HCRT|3060|hypocretin (orexin) neuropeptide precursor##NM_001524|HCRT|3060|hypocretin (orexin) neuropeptide precursor##AK298933|GHDC|84514|GH3 domain containing##BC022784|GHDC|84514|GH3 domain containing##AK122777|GHDC|84514|GH3 domain containing##AK123075|GHDC|84514|GH3 domain containing##AK307058|GHDC|84514|GH3 domain containing##BC011056|GHDC|84514|GH3 domain containing##AK075277|GHDC|84514|GH3 domain containing##NM_001142622|GHDC|84514|GH3 domain containing##NM_001142623|GHDC|84514|GH3 domain containing##NM_032484|GHDC|84514|GH3 domain containing##AK308163|STAT5B|6777|signal transducer and activator of transcription 5B	0.395983	CTCF.p2:-3:0.362
chr17	72404556	72404671	reg1017788.p1	7.871	+	BC143807 AB196530 AB528868 AY288421 NM_181790	-41019	+	NM_001080466	-46656	-	NM_153209 TSC_hg19_v1_chr17_+_72322355 BC067749 BC026362 BC110989 AK094619 BC143327 BC093631 BC104852	-82206	+	BC110848 BC004925 BC069202 NM_022036 BC125080 BC125081	22991	+	AK075397 AF207989 AK222909 TSC_hg19_v1_chr17_+_72428254 AK000249	23642	+	AJ276102 NM_018653	25222	+	BC143807|GPR142|350383|G protein-coupled receptor 142##AB196530|GPR142|350383|G protein-coupled receptor 142##AY288421|GPR142|350383|G protein-coupled receptor 142##NM_181790|GPR142|350383|G protein-coupled receptor 142##NM_001080466|BTBD17|388419|BTB (POZ) domain containing 17##NM_153209|KIF19|124602|kinesin family member 19##BC067749|KIF19|124602|kinesin family member 19##BC026362|KIF19|124602|kinesin family member 19##BC110989|KIF19|124602|kinesin family member 19##AK094619|KIF19|124602|kinesin family member 19##BC143327|KIF19|124602|kinesin family member 19##BC093631|KIF19|124602|kinesin family member 19##BC104852|KIF19|124602|kinesin family member 19##BC110848|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC004925|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC069202|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_022036|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125080|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125081|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AJ276102|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_018653|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	0.0	
chr1	19988368	19988517	reg1017497.p1	7.870	+	AK309257 NM_001204086	-16183	+	AK313265 NM_001204085	-16577	+	TSC_hg19_v1_chr1_+_19970804 NM_005380 BC012037 D28124	-17655	+	L41147 NM_000871	3337	+	TSC_hg19_v1_chr1_-_20126374 BX640987 NM_181719	137968	-	CR457228 BC051880 BC030960 AK000232 AK222991 NM_019062	153239	-	AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_005380|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##BC012037|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##D28124|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##L41147|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##NM_000871|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4##NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4##CR457228|RNF186|54546|ring finger protein 186##BC051880|RNF186|54546|ring finger protein 186##BC030960|RNF186|54546|ring finger protein 186##AK000232|RNF186|54546|ring finger protein 186##AK222991|RNF186|54546|ring finger protein 186##NM_019062|RNF186|54546|ring finger protein 186	0.999842	CTCF.p2:-23:1.000
chr14	103607656	103607769	reg1017681.p2	7.870	+	M92357 NM_006291 BC128449 BC128450 TSC_hg19_v1_chr14_+_103592873	-14944	+	TSC_hg19_v1_chr14_+_103589771 BC017818	-17967	+	BC113655 BC117375 NM_001077594 HQ258590	-41194	+	NM_001969 TSC_hg19_v1_chr14_+_103800527	192798	+	TSC_hg19_v1_chr14_+_103800534 AL080102 AK026933	192828	+	TSC_hg19_v1_chr14_+_103800573 BC107884	192898	+	M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC017818|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC113655|EXOC3L4|91828|exocyst complex component 3-like 4##BC117375|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001077594|EXOC3L4|91828|exocyst complex component 3-like 4##HQ258590|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001969|EIF5|1983|eukaryotic translation initiation factor 5##AL080102|EIF5|1983|eukaryotic translation initiation factor 5##AK026933|EIF5|1983|eukaryotic translation initiation factor 5##BC107884|EIF5|1983|eukaryotic translation initiation factor 5	0.980946	CTCF.p2:2:0.981
chr4	79566022	79566122	reg1015063.p1	7.870	+	TSC_hg19_v1_chr4_+_79472911 BC000871 AK313945	-93164	+	NM_005139 TSC_hg19_v1_chr4_+_79472790	-93302	+	BC006366 TSC_hg19_v1_chr4_-_79103287	-462787	-	TSC_hg19_v1_chr4_+_79697501 AL137661	131411	+	NM_017593 NM_198892 TSC_hg19_v1_chr4_+_79697532	131464	+	TSC_hg19_v1_chr4_+_79697552 AK292147 BC036021 DQ890994	131551	+	BC000871|ANXA3|306|annexin A3##AK313945|ANXA3|306|annexin A3##NM_005139|ANXA3|306|annexin A3##AL137661|BMP2K|55589|BMP2 inducible kinase##NM_017593|BMP2K|55589|BMP2 inducible kinase##NM_198892|BMP2K|55589|BMP2 inducible kinase##AK292147|BMP2K|55589|BMP2 inducible kinase##BC036021|BMP2K|55589|BMP2 inducible kinase##DQ890994|BMP2K|55589|BMP2 inducible kinase	0.0	
chr4	92423625	92423774	reg1018282.p2	7.870	+	BC051694 NM_207491	-1267518	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-1374981	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-1607637	+	AB209318 NM_001510 AK308611	801893	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	2326362	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	2705112	+	BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.979182	CTCF.p2:11:0.979
chr5	108774607	108774727	reg1018202.p1	7.870	+	BC030826 AB007898 TSC_hg19_v1_chr5_-_108745619 AK291759 NM_014819	-29046	-	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	-689995	+	AK293376 J03358 NM_005246 AK296874	-691105	+	TSC_hg19_v1_chr5_+_109025072 BC031659	250397	+	TSC_hg19_v1_chr5_+_109025096 BC111062	250430	+	TSC_hg19_v1_chr5_+_109025138 NM_002372	250478	+	BC030826|PJA2|9867|praja ring finger 2##AB007898|PJA2|9867|praja ring finger 2##AK291759|PJA2|9867|praja ring finger 2##NM_014819|PJA2|9867|praja ring finger 2##AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1	0.036454	
chr8	115084	115219	reg1019473.p1	7.870	+	None	None	None	None	None	None	None	None	None	NM_001005504	1872	-	AK127000 TSC_hg19_v1_chr8_-_182246 BC064938 BC052779	67121	-	NM_173539 AK093442 AX748129 TSC_hg19_v1_chr8_+_182396 AK313454 NM_001042415 NM_001042416 BC026190	67191	+	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21##AK127000|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC064938|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC052779|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##NM_173539|ZNF596|169270|zinc finger protein 596##AK313454|ZNF596|169270|zinc finger protein 596##NM_001042415|ZNF596|169270|zinc finger protein 596##NM_001042416|ZNF596|169270|zinc finger protein 596##BC026190|ZNF596|169270|zinc finger protein 596	0.996754	CTCF.p2:-6:0.997
chr22	25598432	25598575	reg1017249.p2	7.869	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	-2659	+	TSC_hg19_v1_chr22_+_25591072 AK025418	-7374	+	BC171801 NM_001145206	-174563	+	NM_000496	17108	+	AL137651 NM_182492	160020	-	BC139736 NM_001135772	179040	-	NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##AK025418|KIAA1671|85379|KIAA1671##BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##NM_000496|CRYBB2|1415|crystallin, beta B2##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like	0.982276	CTCF.p2:-10:0.956
chrX	130838316	130838496	reg1017655.p1	7.869	+	BC137050 AB529233 NM_001004486	-160408	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-414994	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-415144	-	TSC_hg19_v1_chrX_-_130964633 AK097911	126245	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	318915	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	319234	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.038436	
chrX	2562747	2562859	reg1015501.p1	7.869	+	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	-143815	-	BC015030 NM_001171135	-144224	-	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	-828800	+	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	46509	+	AK304164 NM_001141919 NM_001141920 NM_175569 AF380356 AF534880 BC100764 BC100765 BC100766 BC100767 Z48517 Z48518 Z48519	107411	+	TSC_hg19_v1_chrX_+_2746813 NM_001079855 NM_001184702 NM_001184703 NM_001184704 NM_003918 U94362 AK098046 AK292496 U94363 BC023152	184099	+	BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC015030|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule##AK304164|XG|7499|Xg blood group##NM_001141919|XG|7499|Xg blood group##NM_001141920|XG|7499|Xg blood group##NM_175569|XG|7499|Xg blood group##AF380356|XG|7499|Xg blood group##BC100764|XG|7499|Xg blood group##BC100765|XG|7499|Xg blood group##BC100766|XG|7499|Xg blood group##BC100767|XG|7499|Xg blood group##Z48517|XG|7499|Xg blood group##Z48518|XGPY2|100132596|Xg pseudogene, Y-linked 2##Z48519|XGPY2|100132596|Xg pseudogene, Y-linked 2##NM_001079855|GYG2|8908|glycogenin 2##NM_001184702|GYG2|8908|glycogenin 2##NM_001184703|GYG2|8908|glycogenin 2##NM_001184704|GYG2|8908|glycogenin 2##NM_003918|GYG2|8908|glycogenin 2##U94362|GYG2|8908|glycogenin 2##AK098046|GYG2|8908|glycogenin 2##AK292496|GYG2|8908|glycogenin 2##U94363|GYG2|8908|glycogenin 2##BC023152|GYG2|8908|glycogenin 2	0.977279	CTCF.p2:14:0.977
chr1	226252631	226252748	reg1018257.p1	7.868	+	TSC_hg19_v1_chr1_+_226250433 BC081560 BC081561	-2256	+	TSC_hg19_v1_chr1_+_226250421 AK291102 AK293541 BC029405 BC067757 BC095447 M11354 BC066901	-2263	+	TSC_hg19_v1_chr1_+_226250416 D28384	-2273	+	TSC_hg19_v1_chr1_+_226271319 BC032899	18671	+	BC039575 TSC_hg19_v1_chr1_-_226374400	121711	-	AY150218 TSC_hg19_v1_chr1_-_226374401 BC045533 BC060792 NM_022735 AK025520 AK314468 AB043587	121728	-	BC081560|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC081561|H3F3A|3020|H3 histone, family 3A##AK291102|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##AK293541|H3F3A|3020|H3 histone, family 3A##BC029405|H3F3A|3020|H3 histone, family 3A##BC067757|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC095447|H3F3A|3020|H3 histone, family 3A##M11354|H3F3A|3020|H3 histone, family 3A##BC066901|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##D28384|H3F3A|3020|H3 histone, family 3A##BC039575|ACBD3|64746|acyl-CoA binding domain containing 3##AY150218|ACBD3|64746|acyl-CoA binding domain containing 3##BC045533|ACBD3|64746|acyl-CoA binding domain containing 3##BC060792|ACBD3|64746|acyl-CoA binding domain containing 3##NM_022735|ACBD3|64746|acyl-CoA binding domain containing 3##AK025520|ACBD3|64746|acyl-CoA binding domain containing 3##AK314468|ACBD3|64746|acyl-CoA binding domain containing 3##AB043587|ACBD3|64746|acyl-CoA binding domain containing 3	0.869524	CTCF.p2:0:0.870
chr15	62127819	62127943	reg1016667.p1	7.868	+	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	-606384	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	-606457	-	U04899 U04898 NM_002943 NM_134260	-1208196	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	224733	-	NM_207322 AF504646	231307	+	NM_001007595	329600	-	NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B	0.998354	CTCF.p2:4:0.998
chr1	167606672	167606852	reg1015785.p2	7.867	+	TSC_hg19_v1_chr1_+_167599557 AL137762 BC101536 BC101562 BC143428	-7193	+	AF545852 TSC_hg19_v1_chr1_+_167599495 NM_052862 AK130798	-7349	+	TSC_hg19_v1_chr1_-_167523043 NM_003851	-83699	-	TSC_hg19_v1_chr1_+_167691226 NM_001146191 NM_003953 NM_024569 AK297112 AK075334 AK307250 AK291249 AY359019 AF181660 AF478447 BC000984 BC007881 AF095727 AF087020 AF092425 AF095726 AK315546 AB527648 AF239756 BT019542 CR542160 HQ447352	84566	+	BC117366 BC117372 AF176813 AF299350 AF331033 AK310395 AK310531 AK302884 NM_001167749 NM_018417	276585	-	AB528078 AM393085 CR407632 CR533473 TSC_hg19_v1_chr1_-_167905197 BC104157 BC104158	298380	-	AL137762|RCSD1|92241|RCSD domain containing 1##BC101536|RCSD1|92241|RCSD domain containing 1##BC101562|RCSD1|92241|RCSD domain containing 1##BC143428|RCSD1|92241|RCSD domain containing 1##AF545852|RCSD1|92241|RCSD domain containing 1##NM_052862|RCSD1|92241|RCSD domain containing 1##NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1##NM_001146191|MPZL1|9019|myelin protein zero-like 1##NM_003953|MPZL1|9019|myelin protein zero-like 1##NM_024569|MPZL1|9019|myelin protein zero-like 1##AK297112|MPZL1|9019|myelin protein zero-like 1##AK075334|MPZL1|9019|myelin protein zero-like 1##AK307250|MPZL1|9019|myelin protein zero-like 1##AK291249|MPZL1|9019|myelin protein zero-like 1##AY359019|MPZL1|9019|myelin protein zero-like 1##AF181660|MPZL1|9019|myelin protein zero-like 1##AF478447|MPZL1|9019|myelin protein zero-like 1##BC000984|MPZL1|9019|myelin protein zero-like 1##BC007881|MPZL1|9019|myelin protein zero-like 1##AF095727|MPZL1|9019|myelin protein zero-like 1##AF087020|MPZL1|9019|myelin protein zero-like 1##AF092425|MPZL1|9019|myelin protein zero-like 1##AF095726|MPZL1|9019|myelin protein zero-like 1##AK315546|MPZL1|9019|myelin protein zero-like 1##AF239756|MPZL1|9019|myelin protein zero-like 1##BT019542|MPZL1|9019|myelin protein zero-like 1##CR542160|MPZL1|9019|myelin protein zero-like 1##HQ447352|MPZL1|9019|myelin protein zero-like 1##BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)##BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)##AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)##AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)##AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)##AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)##AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)##AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)##NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)##NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)##AM393085|BRP44|25874|brain protein 44##CR407632|BRP44|25874|brain protein 44##CR533473|BRP44|25874|brain protein 44##BC104157|BRP44|25874|brain protein 44##BC104158|BRP44|25874|brain protein 44	0.20802	CTCF.p2:-2:0.208
chr2	7177991	7178113	reg1017689.p1	7.867	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-120465	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-160189	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-171349	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1644151	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1799667	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1965769	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.98969	CTCF.p2:-2:0.990
chrX	152915226	152915342	reg1017569.p2	7.867	+	TSC_hg19_v1_chrX_+_152912656 BC060837	-2544	+	TSC_hg19_v1_chrX_+_152908821 BC034936 BC042166	-6409	+	TSC_hg19_v1_chrX_+_152907894 AK314250 NM_001395 Y08302	-7345	+	AK303746 NM_001135740	23458	-	BC033746 AK296067 TSC_hg19_v1_chrX_-_152939308 BC064422	24044	-	AK309148 AK296203 NM_001039582 TSC_hg19_v1_chrX_-_152939817	24510	-	BC060837|DUSP9|1852|dual specificity phosphatase 9##BC034936|DUSP9|1852|dual specificity phosphatase 9##BC042166|DUSP9|1852|dual specificity phosphatase 9##AK314250|DUSP9|1852|dual specificity phosphatase 9##NM_001395|DUSP9|1852|dual specificity phosphatase 9##Y08302|DUSP9|1852|dual specificity phosphatase 9##AK303746|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##NM_001135740|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##BC033746|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK296067|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##BC064422|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK309148|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK296203|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##NM_001039582|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase	0.553362	CTCF.p2:13:0.292	CTCF.p2:-79:0.220
chr14	30683806	30683915	reg1016290.p1	7.866	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	-287006	-	TSC_hg19_v1_chr14_+_29241992 BX248251	-1441865	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-1446947	+	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	344500	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	407664	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	407684	+	AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1	0.597655	CTCF.p2:5:0.598
chr17_ctg5_hap1	1247524	1247644	reg1016651.p1	7.866	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.052466	
chr6	101167893	101168006	reg1015885.p1	7.866	+	NM_005068 U70212	-256399	-	AK123634 NM_001040179 NM_032503 AF347063	-725839	-	AY004253 NM_021620	-1113300	+	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	161151	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	161267	-	TSC_hg19_v1_chr6_-_101329241 BC026066 AK299117	161294	-	NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC026066|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK299117|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.887792	CTCF.p2:6:0.888
chr13	20771607	20771733	reg1017696.p2	7.865	+	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	-4559	-	BC017048 BC071703 TSC_hg19_v1_chr13_-_20767078 AK225966	-4612	-	NM_021954	-36488	-	NM_006783	33701	-	NM_001110219 NM_001110220 NM_001110221	34863	-	BC119660 BC119661 TSC_hg19_v1_chr13_-_21099959 AF160216 AF077049 AF087898 AK024041 BC071810 NM_015974	328303	-	AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa##BC017048|GJB2|2706|gap junction protein, beta 2, 26kDa##BC071703|GJB2|2706|gap junction protein, beta 2, 26kDa##AK225966|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_021954|GJA3|2700|gap junction protein, alpha 3, 46kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110219|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110220|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110221|GJB6|10804|gap junction protein, beta 6, 30kDa##BC119660|CRYL1|51084|crystallin, lambda 1##BC119661|CRYL1|51084|crystallin, lambda 1##AF160216|CRYL1|51084|crystallin, lambda 1##AF077049|CRYL1|51084|crystallin, lambda 1##AF087898|CRYL1|51084|crystallin, lambda 1##AK024041|CRYL1|51084|crystallin, lambda 1##BC071810|CRYL1|51084|crystallin, lambda 1##NM_015974|CRYL1|51084|crystallin, lambda 1	0.95026	CTCF.p2:-10:0.950
chr2	47664583	47664706	reg1016834.p1	7.865	+	TSC_hg19_v1_chr2_+_47630294 AK223284 AK296831 AK297763 BX649122 BC021566 AK311330 DQ892558 DQ895772 AB489153 BC001122 U03911 CU692370 DQ648894	-34327	+	TSC_hg19_v1_chr2_+_47630289 BC012599 NM_000251 U04045 AK222860 L47574 L47575 L47576 L47577 L47578 L47579 L47580 L47581 L47582 L47583	-34376	+	TSC_hg19_v1_chr2_+_47630218 AK304496	-34440	+	AF287302 NM_022055 BC047749	132839	-	TSC_hg19_v1_chr2_-_47918421 D28393	253775	-	BC071594 NM_000179 TSC_hg19_v1_chr2_+_48010283 U28946 D89646 BC104665 U54777 BC004246 AK293921 AK308392 AB590153 DQ892898	345652	+	AK223284|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK296831|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK297763|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BX649122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC021566|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK311330|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ892558|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ895772|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC001122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U03911|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ648894|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC012599|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##NM_000251|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U04045|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK222860|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47574|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47575|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47576|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47577|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47578|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47579|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47580|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47581|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47582|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47583|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AF287302|KCNK12|56660|potassium channel, subfamily K, member 12##NM_022055|KCNK12|56660|potassium channel, subfamily K, member 12##BC047749|KCNK12|56660|potassium channel, subfamily K, member 12##D28393|RPL18A|6142|ribosomal protein L18a##BC071594|MSH6|2956|mutS homolog 6 (E. coli)##NM_000179|MSH6|2956|mutS homolog 6 (E. coli)##U28946|MSH6|2956|mutS homolog 6 (E. coli)##D89646|MSH6|2956|mutS homolog 6 (E. coli)##BC104665|MSH6|2956|mutS homolog 6 (E. coli)##U54777|MSH6|2956|mutS homolog 6 (E. coli)##BC004246|MSH6|2956|mutS homolog 6 (E. coli)##AK293921|MSH6|2956|mutS homolog 6 (E. coli)##AK308392|MSH6|2956|mutS homolog 6 (E. coli)##DQ892898|MSH6|2956|mutS homolog 6 (E. coli)	0.972678	CTCF.p2:-30:0.973
chr3	182431988	182432082	reg1015977.p1	7.865	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-1001897	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-1002322	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-1014643	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	79252	+	AK296750 TSC_hg19_v1_chr3_+_182511291	79260	+	TSC_hg19_v1_chr3_+_182511375 AF156548	79354	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.025889	
chr11	101731604	101731720	reg1015128.p1	7.864	+	AJ006276 NM_004621	-277004	-	AK304853 TSC_hg19_v1_chr11_-_101000531 NM_000926	-731159	-	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	-731863	-	TSC_hg19_v1_chr11_+_101785752 NM_020802 AK057230 BC036525 BC146807	54125	+	TSC_hg19_v1_chr11_+_101785949 AK309479 BX647415	54330	+	BC049170 BC053957 NM_178127	55590	-	AJ006276|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6##NM_004621|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6##AK304853|PGR|5241|progesterone receptor##NM_000926|PGR|5241|progesterone receptor##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor##NM_020802|KIAA1377|57562|KIAA1377##AK057230|KIAA1377|57562|KIAA1377##BC036525|KIAA1377|57562|KIAA1377##BC146807|KIAA1377|57562|KIAA1377##BX647415|KIAA1377|57562|KIAA1377##BC049170|ANGPTL5|253935|angiopoietin-like 5##BC053957|ANGPTL5|253935|angiopoietin-like 5##NM_178127|ANGPTL5|253935|angiopoietin-like 5	0.979515	CTCF.p2:17:0.980
chr11	66153732	66153869	reg1015936.p1	7.864	+	AF029358 BC093634 BC143335 X86681 TSC_hg19_v1_chr11_-_66139222 AF034102 AF401235 NM_001532	-14623	-	CU692428 DQ892706 DQ895957 AK075354 AK098779 AK225182 TSC_hg19_v1_chr11_-_66115101 AK294604 BC021965 AK293715 AF029893 AK098389 NM_006876	-38709	-	BC009834 TSC_hg19_v1_chr11_-_66112576 AF159141 AK310991 NM_001024957 NM_015399	-41240	-	AK096253 NM_178864 TSC_hg19_v1_chr11_+_66188505 AB049469 BC105001 BC105003 BC143630 EU446888	34761	+	TSC_hg19_v1_chr11_-_66206308 BC108277 AB049638 AK290084 AK223112 BC005002 AF151871 NM_016050 NM_170738 NM_170739	52486	-	AK094060 AX748433 NM_001243135	79997	+	AF029358|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC093634|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC143335|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##X86681|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF034102|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF401235|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##NM_001532|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##BC009834|BRMS1|25855|breast cancer metastasis suppressor 1##AF159141|BRMS1|25855|breast cancer metastasis suppressor 1##AK310991|BRMS1|25855|breast cancer metastasis suppressor 1##NM_001024957|BRMS1|25855|breast cancer metastasis suppressor 1##NM_015399|BRMS1|25855|breast cancer metastasis suppressor 1##AK096253|NPAS4|266743|neuronal PAS domain protein 4##NM_178864|NPAS4|266743|neuronal PAS domain protein 4##AB049469|NPAS4|266743|neuronal PAS domain protein 4##BC105001|NPAS4|266743|neuronal PAS domain protein 4##BC105003|NPAS4|266743|neuronal PAS domain protein 4##BC143630|NPAS4|266743|neuronal PAS domain protein 4##EU446888|NPAS4|266743|neuronal PAS domain protein 4##BC108277|MRPL11|65003|mitochondrial ribosomal protein L11##AB049638|MRPL11|65003|mitochondrial ribosomal protein L11##AK290084|MRPL11|65003|mitochondrial ribosomal protein L11##AK223112|MRPL11|65003|mitochondrial ribosomal protein L11##BC005002|MRPL11|65003|mitochondrial ribosomal protein L11##AF151871|MRPL11|65003|mitochondrial ribosomal protein L11##NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11##NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11##NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11##AK094060|PELI3|246330|pellino homolog 3 (Drosophila)##NM_001243135|PELI3|246330|pellino homolog 3 (Drosophila)	0.999115	CTCF.p2:20:0.999
chr11	94150676	94150794	reg1016472.p1	7.864	+	TSC_hg19_v1_chr11_-_94134589 AK315161 NM_016540	-16153	-	NM_001199206	-111933	+	TSC_hg19_v1_chr11_+_93862307 AY359023 FM201789	-288415	+	U37359 TSC_hg19_v1_chr11_-_94227011 BC017823 BC005241 AK095388 AF022778 AK308318 NM_005590 NM_005591	76238	-	TSC_hg19_v1_chr11_+_94227168 NM_017704 AF025354 AK000196 BC017798 AK000448 AL833977	76423	+	NM_001190462	94959	+	AK315161|GPR83|10888|G protein-coupled receptor 83##NM_016540|GPR83|10888|G protein-coupled receptor 83##NM_001199206|FOLR4|390243|folate receptor 4 (delta) homolog (mouse)##AY359023|PANX1|24145|pannexin 1##FM201789|PANX1|24145|pannexin 1##U37359|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC017823|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC005241|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK095388|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AF022778|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK308318|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005590|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005591|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_017704|ANKRD49|54851|ankyrin repeat domain 49##AF025354|ANKRD49|54851|ankyrin repeat domain 49##AK000196|ANKRD49|54851|ankyrin repeat domain 49##BC017798|ANKRD49|54851|ankyrin repeat domain 49##AK000448|ANKRD49|54851|ankyrin repeat domain 49##AL833977|ANKRD49|54851|ankyrin repeat domain 49##NM_001190462|LOC643037|643037|uncharacterized LOC643037	0.917415	CTCF.p2:12:0.917
chr20	36743760	36743890	reg1017732.p1	7.864	+	TSC_hg19_v1_chr20_+_36662228 AB463518 CU689672	-81548	+	TSC_hg19_v1_chr20_+_36662168 BC033629 AK312468 BC001696	-81658	+	TSC_hg19_v1_chr20_+_36661917 NM_021215 DQ372938	-81864	+	TSC_hg19_v1_chr20_-_36758362 M98479	14566	-	TSC_hg19_v1_chr20_-_36793673 AK291714 AK058031 AK295775 AK300292 AK314618 BC003551 NM_004613 NM_198951	49854	-	AK096202 NM_001029864	145348	-	BC033629|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##AK312468|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##BC001696|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##NM_021215|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##DQ372938|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##M98479|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291714|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK058031|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK295775|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK300292|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK314618|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC003551|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_004613|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_198951|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755	0.0	
chr2	230451928	230452034	reg1017856.p1	7.864	+	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	-315976	-	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-1405619	-	AK097409 NM_178821 BC036377 AK098821 AK301861	-1715629	+	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	127267	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	334680	-	TSC_hg19_v1_chr2_-_230786712 AK310971	334768	-	AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12	0.381614	CTCF.p2:24:0.382
chr5	141523614	141523732	reg1018640.p1	7.864	+	TSC_hg19_v1_chr5_+_141488389 AB097010 AB097037 BC004317	-35263	+	AK075524 TSC_hg19_v1_chr5_+_141488384	-35289	+	TSC_hg19_v1_chr5_+_141488343 NM_030571 AK315481 AY192728	-35325	+	BC125095 BC125096 TSC_hg19_v1_chr5_-_141704555 AF227516 AF227517	180847	-	TSC_hg19_v1_chr5_-_141704587 AK096464 NM_001127496 NM_030964	180961	-	S67291 S67292 S67294 AB528663 X65778 X65779 M13361 NM_033137 X51943	470035	-	AB097010|NDFIP1|80762|Nedd4 family interacting protein 1##AB097037|NDFIP1|80762|Nedd4 family interacting protein 1##BC004317|NDFIP1|80762|Nedd4 family interacting protein 1##AK075524|NDFIP1|80762|Nedd4 family interacting protein 1##NM_030571|NDFIP1|80762|Nedd4 family interacting protein 1##AK315481|NDFIP1|80762|Nedd4 family interacting protein 1##AY192728|NDFIP1|80762|Nedd4 family interacting protein 1##BC125095|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125096|SPRY4|81848|sprouty homolog 4 (Drosophila)##AF227516|SPRY4|81848|sprouty homolog 4 (Drosophila)##AK096464|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_001127496|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_030964|SPRY4|81848|sprouty homolog 4 (Drosophila)##S67291|FGF1|2246|fibroblast growth factor 1 (acidic)##S67292|FGF1|2246|fibroblast growth factor 1 (acidic)##S67294|FGF1|2246|fibroblast growth factor 1 (acidic)##X65778|FGF1|2246|fibroblast growth factor 1 (acidic)##X65779|FGF1|2246|fibroblast growth factor 1 (acidic)##M13361|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)##X51943|FGF1|2246|fibroblast growth factor 1 (acidic)	0.925751	CTCF.p2:-16:0.926
chr17	30788877	30789002	reg1016792.p1	7.863	+	TSC_hg19_v1_chr17_+_30771536 BC000437 BC004430 AB590847	-17394	+	TSC_hg19_v1_chr17_+_30771527 AK223196 AB003102	-17413	+	TSC_hg19_v1_chr17_+_30771521 AK300342	-17419	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	25132	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	25658	+	TSC_hg19_v1_chr17_+_30814712 AK307275	25821	+	BC000437|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##BC004430|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##AK223196|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##AB003102|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##AK300342|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	0.995351	CTCF.p2:-7:0.995
chr5	55610473	55610653	reg1018469.p1	7.863	+	AK123389 NM_024669	-81378	-	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-319800	-	NM_001242636 NM_001242639	-461414	+	NM_005921	500336	+	TSC_hg19_v1_chr5_+_56111375 AK307828	500801	+	TSC_hg19_v1_chr5_+_56111395 AF042838	500855	+	AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.127918	
chr6	101562619	101562747	reg1016931.p1	7.863	+	TSC_hg19_v1_chr6_-_101329241 BC026066 AK299117	-233440	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	-233467	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	-233583	-	HM149340 TSC_hg19_v1_chr6_+_101841583	278823	+	BC037954 TSC_hg19_v1_chr6_+_101846686	283994	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	284222	+	BC026066|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK299117|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	0.191725	
chr4	176031227	176031361	reg1020287.p1	7.862	+	NM_001130703 NM_001130704 NM_001130705 NM_014269 AK292410 BC036070	-191761	+	U93917 BC036086 NM_001042543 NM_006529	-280874	-	AK300524 NM_000860 NM_001145816	-587503	-	CU692222 CU692662 DQ892372 DQ895581 TSC_hg19_v1_chr4_-_176733403	702099	-	BC010461 BC022508 TSC_hg19_v1_chr4_-_176733419 D49958	702147	-	BC044612 BC053954 TSC_hg19_v1_chr4_-_176733905	702612	-	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29##NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29##AK292410|ADAM29|11086|ADAM metallopeptidase domain 29##BC036070|ADAM29|11086|ADAM metallopeptidase domain 29##U93917|GLRA3|8001|glycine receptor, alpha 3##BC036086|GLRA3|8001|glycine receptor, alpha 3##NM_001042543|GLRA3|8001|glycine receptor, alpha 3##NM_006529|GLRA3|8001|glycine receptor, alpha 3##AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##DQ892372|GPM6A|2823|glycoprotein M6A##DQ895581|GPM6A|2823|glycoprotein M6A##BC010461|GPM6A|2823|glycoprotein M6A##BC022508|GPM6A|2823|glycoprotein M6A##D49958|GPM6A|2823|glycoprotein M6A##BC044612|GPM6A|2823|glycoprotein M6A##BC053954|GPM6A|2823|glycoprotein M6A	0.980108	CTCF.p2:6:0.980
chr8	106785303	106785420	reg1016539.p2	7.862	+	AF119334 BC109222 BC109223 NM_012082	-454215	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-1184114	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-1184186	-	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	497062	+	AK296561 NM_001198532	674790	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	884627	+	AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1	0.998538	CTCF.p2:3:0.999
chr1	31402331	31402476	reg1018853.p1	7.861	+	AB385258 AF248634 NM_014654 TSC_hg19_v1_chr1_-_31381606	-20855	-	TSC_hg19_v1_chr1_-_31345363 AL049426	-57005	-	TSC_hg19_v1_chr1_-_31230697 NM_006762	-171713	-	TSC_hg19_v1_chr1_-_31538543 BC013398 D43951 AK291779 AK300457 AF315592 AK096476 AK222605	136114	-	TSC_hg19_v1_chr1_-_31538565 GQ334687 GQ334688 NM_001020658 NM_014676 AK294477	136189	-	BX647437 TSC_hg19_v1_chr1_-_31538801	136380	-	AF248634|SDC3|9672|syndecan 3##NM_014654|SDC3|9672|syndecan 3##AL049426|SDC3|9672|syndecan 3##NM_006762|LAPTM5|7805|lysosomal protein transmembrane 5##BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)##D43951|PUM1|9698|pumilio homolog 1 (Drosophila)##AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)##AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)##AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)##AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)##AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)##NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)##NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)##AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)##BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)	0.086917	
chr14	21439684	21439833	reg1018801.p2	7.861	+	TSC_hg19_v1_chr14_+_21423628 NM_002934 X55988 BC093678 BC093680 M28129 M24157 BC096059 M30510	-16110	+	TSC_hg19_v1_chr14_+_21359543 NM_002935 X15161 M28128 BC096060 BC096061 BC096062	-80199	+	TSC_hg19_v1_chr14_-_21271004 AK312100 BC022882 BC005324 NM_002933 NM_198234 NM_198235	-168740	-	NM_001029991 NM_022734	18206	+	TSC_hg19_v1_chr14_+_21458138 AF321002 AK024512 AK303484 AK304180 AK315999 BC005053 AB590821 CU674975	18388	+	NM_014579 AK314974 AF186081 D83039 BC096723 BC098254 BC098274 BC110057 AB527985	27751	+	NM_002934|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##X55988|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093678|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093680|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M28129|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M24157|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC096059|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M30510|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##NM_002935|RNASE3|6037|ribonuclease, RNase A family, 3##X15161|RNASE3|6037|ribonuclease, RNase A family, 3##M28128|RNASE3|6037|ribonuclease, RNase A family, 3##BC096060|RNASE3|6037|ribonuclease, RNase A family, 3##BC096061|RNASE3|6037|ribonuclease, RNase A family, 3##BC096062|RNASE3|6037|ribonuclease, RNase A family, 3##AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_001029991|METTL17|64745|methyltransferase like 17##NM_022734|METTL17|64745|methyltransferase like 17##AF321002|METTL17|64745|methyltransferase like 17##AK024512|METTL17|64745|methyltransferase like 17##AK303484|METTL17|64745|methyltransferase like 17##AK304180|METTL17|64745|methyltransferase like 17##AK315999|METTL17|64745|methyltransferase like 17##BC005053|METTL17|64745|methyltransferase like 17##NM_014579|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##AK314974|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##AF186081|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##D83039|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##BC096723|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##BC098254|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##BC098274|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##BC110057|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2	0.998095	CTCF.p2:-16:0.998
chr22	24108911	24109022	reg1016836.p1	7.861	+	AK093880 AX748349 NM_182520	-3759	+	CU013206 CU013494 DQ893106 DQ896379 CR456610 AK312098 AF163825 AY359000 NM_013378 BC020666	-12364	-	CR456615 TSC_hg19_v1_chr22_-_24093285 BC040161 NM_021916	-15807	-	TSC_hg19_v1_chr22_-_24110129 BC053570 AK289560 BC065232 NM_213720	1146	-	AK075448 AK129792 NM_005940 X57766 BC057788	6079	+	TSC_hg19_v1_chr22_+_24129164 AK024025 NM_001007468 NM_003073 AK303620 AK021419 AK299411 AJ011737 AJ011738 U04847 BC117114 BC143667 CR456581 AL389878 AB463295 CU013180 CU013468 HQ258224 AB017523	20283	+	AK093880|C22orf15|150248|chromosome 22 open reading frame 15##NM_182520|C22orf15|150248|chromosome 22 open reading frame 15##CU013206|VPREB3|29802|pre-B lymphocyte 3##CU013494|VPREB3|29802|pre-B lymphocyte 3##DQ893106|VPREB3|29802|pre-B lymphocyte 3##DQ896379|VPREB3|29802|pre-B lymphocyte 3##CR456610|VPREB3|29802|pre-B lymphocyte 3##AK312098|VPREB3|29802|pre-B lymphocyte 3##AF163825|VPREB3|29802|pre-B lymphocyte 3##AY359000|VPREB3|29802|pre-B lymphocyte 3##NM_013378|VPREB3|29802|pre-B lymphocyte 3##BC020666|VPREB3|29802|pre-B lymphocyte 3##CR456615|ZNF70|7621|zinc finger protein 70##BC040161|ZNF70|7621|zinc finger protein 70##NM_021916|ZNF70|7621|zinc finger protein 70##BC053570|CHCHD10|400916|coiled-coil-helix-coiled-coil-helix domain containing 10##AK289560|CHCHD10|400916|coiled-coil-helix-coiled-coil-helix domain containing 10##BC065232|CHCHD10|400916|coiled-coil-helix-coiled-coil-helix domain containing 10##NM_213720|CHCHD10|400916|coiled-coil-helix-coiled-coil-helix domain containing 10##AK075448|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##AK129792|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##NM_005940|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##X57766|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##BC057788|MMP11|4320|matrix metallopeptidase 11 (stromelysin 3)##AK024025|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##NM_001007468|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##NM_003073|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK303620|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK021419|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AK299411|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AJ011737|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AJ011738|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##BC117114|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##BC143667|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CR456581|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AL389878|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CU013180|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##CU013468|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##HQ258224|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1##AB017523|SMARCB1|6598|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	0.106259	
chr3	96582113	96582244	reg1017950.p1	7.861	+	NM_001080448 TSC_hg19_v1_chr3_+_96533435 AK092565 AX747601	-48748	+	AK122674 NM_001195643	-2800112	-	TSC_hg19_v1_chr3_+_93781863 AF169972 BC018432 BC020602 BC057238 NM_022072 AK026262	-2800334	+	AK302040 AK310249 BC031881 BC067287 AK302080 AL133666 NM_173655	576293	+	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	901422	+	TSC_hg19_v1_chr3_+_97540854 AK296966	958692	+	NM_001080448|EPHA6|285220|EPH receptor A6##AK092565|EPHA6|285220|EPH receptor A6##AK122674|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1##AF169972|NSUN3|63899|NOP2/Sun domain family, member 3##BC018432|NSUN3|63899|NOP2/Sun domain family, member 3##BC020602|NSUN3|63899|NOP2/Sun domain family, member 3##BC057238|NSUN3|63899|NOP2/Sun domain family, member 3##NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3##AK026262|NSUN3|63899|NOP2/Sun domain family, member 3##AK302040|EPHA6|285220|EPH receptor A6##AK310249|EPHA6|285220|EPH receptor A6##BC031881|EPHA6|285220|EPH receptor A6##BC067287|EPHA6|285220|EPH receptor A6##AK302080|EPHA6|285220|EPH receptor A6##AL133666|EPHA6|285220|EPH receptor A6##NM_173655|EPHA6|285220|EPH receptor A6##BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6##AK296966|CRYBG3|131544|beta-gamma crystallin domain containing 3	0.319903	CTCF.p2:-8:0.320
chr7	142700668	142700789	reg1017562.p1	7.861	+	M64934 TSC_hg19_v1_chr7_-_142659447 DQ896776 EU176416 BC003135 NM_000420	-41271	-	BC050639 TSC_hg19_v1_chr7_-_142659405 AK314831	-41327	-	BC014596 NM_178829 AB083483 AB083484 AB464498	-64069	+	NM_001001658 BC137048 BC137049	23521	-	BC137044 NM_001001667	48698	+	BC010950 AK312227 BC010951 NM_002652 Y10179 J03460	128448	+	M64934|KEL|3792|Kell blood group, metallo-endopeptidase##DQ896776|KEL|3792|Kell blood group, metallo-endopeptidase##EU176416|KEL|3792|Kell blood group, metallo-endopeptidase##BC003135|KEL|3792|Kell blood group, metallo-endopeptidase##NM_000420|KEL|3792|Kell blood group, metallo-endopeptidase##BC050639|KEL|3792|Kell blood group, metallo-endopeptidase##AK314831|KEL|3792|Kell blood group, metallo-endopeptidase##BC014596|C7orf34|135927|chromosome 7 open reading frame 34##NM_178829|C7orf34|135927|chromosome 7 open reading frame 34##AB083483|C7orf34|135927|chromosome 7 open reading frame 34##AB083484|C7orf34|135927|chromosome 7 open reading frame 34##NM_001001658|OR9A2|135924|olfactory receptor, family 9, subfamily A, member 2##BC137048|OR9A2|135924|olfactory receptor, family 9, subfamily A, member 2##BC137049|OR9A2|135924|olfactory receptor, family 9, subfamily A, member 2##BC137044|OR6V1|346517|olfactory receptor, family 6, subfamily V, member 1##NM_001001667|OR6V1|346517|olfactory receptor, family 6, subfamily V, member 1##BC010950|PIP|5304|prolactin-induced protein##AK312227|PIP|5304|prolactin-induced protein##BC010951|PIP|5304|prolactin-induced protein##NM_002652|PIP|5304|prolactin-induced protein##Y10179|PIP|5304|prolactin-induced protein##J03460|PIP|5304|prolactin-induced protein	0.992356	CTCF.p2:4:0.992
chr10	111612319	111612422	reg1014854.p1	7.860	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-2687994	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-3153311	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-5211325	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	70839	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	70907	-	NM_019903 AB209810 BC057285	153411	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.999688	CTCF.p2:4:1.000
chr11	70037758	70037879	reg1019600.p1	7.860	+	AY728143 NM_018043 TSC_hg19_v1_chr11_+_69924473	-113378	+	NM_005247	-403627	-	M17446 NM_002007	-447648	-	NM_003824 TSC_hg19_v1_chr11_+_70049420 AK291005 AK293320 BC000334 X84709 U24231 BC025733 EU176185 AB587588 AY423721 BT006927 CR456738	11598	+	TSC_hg19_v1_chr11_+_70116795 NM_003626 NM_177423	78986	+	TSC_hg19_v1_chr11_+_70116841 BC034046 AB209314	79043	+	AY728143|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_018043|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_005247|FGF3|2248|fibroblast growth factor 3##M17446|FGF4|2249|fibroblast growth factor 4##NM_002007|FGF4|2249|fibroblast growth factor 4##NM_003824|FADD|8772|Fas (TNFRSF6)-associated via death domain##AK291005|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC000334|FADD|8772|Fas (TNFRSF6)-associated via death domain##X84709|FADD|8772|Fas (TNFRSF6)-associated via death domain##U24231|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC025733|FADD|8772|Fas (TNFRSF6)-associated via death domain##EU176185|FADD|8772|Fas (TNFRSF6)-associated via death domain##AY423721|FADD|8772|Fas (TNFRSF6)-associated via death domain##BT006927|FADD|8772|Fas (TNFRSF6)-associated via death domain##CR456738|FADD|8772|Fas (TNFRSF6)-associated via death domain##NM_003626|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##NM_177423|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##BC034046|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##AB209314|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1	0.561276	CTCF.p2:13:0.561
chr1	18626328	18626440	reg1017877.p1	7.860	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	-192107	+	AK057339 NM_030812 BC028909 U20582	-544538	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	-681519	+	NM_152375	181039	+	NM_001135254 NM_002584 NM_013945 X96743	331115	+	NM_152232 AB527225	559771	-	AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_152375|KLHDC7A|127707|kelch domain containing 7A##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2	0.096144	
chr3	171753029	171753160	reg1014039.p1	7.860	+	NM_001164436 AK026825	-191946	+	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	-224839	-	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-575023	-	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	4321	+	TSC_hg19_v1_chr3_+_171757437 AK127826	4340	+	TSC_hg19_v1_chr3_+_171757442 AY358367	4364	+	NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B##AK127826|FNDC3B|64778|fibronectin type III domain containing 3B##AY358367|FNDC3B|64778|fibronectin type III domain containing 3B	0.996547	CTCF.p2:-13:0.997
chr4	10895150	10895297	reg1018818.p1	7.860	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-208822	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-436213	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-776687	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	535309	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2590728	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2590752	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr5	669310	669444	reg1016895.p1	7.860	+	TSC_hg19_v1_chr5_+_612458 AK001427 BC000132 AB040952 AB384228 AK299072 CU674056 BC001750	-56911	+	NM_018140 TSC_hg19_v1_chr5_+_612451	-56949	+	BC101669 BC101671 BC143328 U28043 BC011555 NM_004174 TSC_hg19_v1_chr5_-_524565	-144872	-	TSC_hg19_v1_chr5_-_693430 AB017016 BC040496 AK098392 NM_007030	24084	-	AK023215 NM_024786	181723	-	TSC_hg19_v1_chr5_-_892666 BX648703 AK297573 AK301987 NM_001009877	223272	-	AK001427|CEP72|55722|centrosomal protein 72kDa##BC000132|CEP72|55722|centrosomal protein 72kDa##AB040952|CEP72|55722|centrosomal protein 72kDa##AK299072|CEP72|55722|centrosomal protein 72kDa##BC001750|CEP72|55722|centrosomal protein 72kDa##NM_018140|CEP72|55722|centrosomal protein 72kDa##BC101669|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC101671|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC143328|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##U28043|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC011555|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##NM_004174|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##AB017016|TPPP|11076|tubulin polymerization promoting protein##BC040496|TPPP|11076|tubulin polymerization promoting protein##AK098392|TPPP|11076|tubulin polymerization promoting protein##NM_007030|TPPP|11076|tubulin polymerization promoting protein##AK023215|ZDHHC11|79844|zinc finger, DHHC-type containing 11##NM_024786|ZDHHC11|79844|zinc finger, DHHC-type containing 11##BX648703|BRD9|65980|bromodomain containing 9##AK297573|BRD9|65980|bromodomain containing 9##AK301987|BRD9|65980|bromodomain containing 9##NM_001009877|BRD9|65980|bromodomain containing 9	1.152416	CTCF.p2:3:0.794	CTCF.p2:-66:0.358
chr10	16885399	16885528	reg1015776.p1	7.859	+	TSC_hg19_v1_chr10_-_16859451 BC015644 BC005993 BC107898 BX647733 NM_012425 NM_152724	-26028	-	TSC_hg19_v1_chr10_-_16859397 AK225681 AK312520	-26069	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	-26104	-	AF034611 NM_001081 TSC_hg19_v1_chr10_-_17171878	286370	-	TSC_hg19_v1_chr10_-_17243660 CR450316 AF045888 AK291417 AF012128 BC047733 AK303428 BX537961 AJ223333 AK299027	358270	-	NM_004412	358606	-	BC015644|RSU1|6251|Ras suppressor protein 1##BC005993|RSU1|6251|Ras suppressor protein 1##BC107898|RSU1|6251|Ras suppressor protein 1##BX647733|RSU1|6251|Ras suppressor protein 1##NM_012425|RSU1|6251|Ras suppressor protein 1##NM_152724|RSU1|6251|Ras suppressor protein 1##AK225681|RSU1|6251|Ras suppressor protein 1##AK312520|RSU1|6251|Ras suppressor protein 1##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1##AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)##NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)##CR450316|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF045888|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK291417|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF012128|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##BC047733|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK303428|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##BX537961|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AJ223333|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK299027|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##NM_004412|TRDMT1|1787|tRNA aspartic acid methyltransferase 1	0.997236	CTCF.p2:-2:0.997
chr22	24627363	24627445	reg1017069.p1	7.859	+	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	-49960	+	TSC_hg19_v1_chr22_+_24577424 AK026431	-49977	+	TSC_hg19_v1_chr22_+_24551954 AL390166	-75447	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	13575	-	TSC_hg19_v1_chr22_+_24666804 NM_001145468 NM_015330 AK097129 AK301482 AB209022 AL832425 BC005093 BC136471	39436	+	TSC_hg19_v1_chr22_+_24819870 EU036694	192476	+	BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##AK026431|SUSD2|56241|sushi domain containing 2##AL390166|CABIN1|23523|calcineurin binding protein 1##CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5##NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##EU036694|ADORA2A|135|adenosine A2a receptor	0.963611	CTCF.p2:-12:0.964
chr3	75692289	75692413	reg1017123.p1	7.859	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	-208202	-	AB384611 BC150608 NM_020872	-1122049	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-2018313	-	AK000525 NM_001124759	21132	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	29135	+	NM_001128223	141903	-	BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##NM_001128223|ZNF717|100131827|zinc finger protein 717	0.996146	CTCF.p2:7:0.996
chr6	108813471	108813603	reg1019032.p1	7.859	+	TSC_hg19_v1_chr6_+_108616194 AF520418 BC018445 NM_145315	-197398	+	TSC_hg19_v1_chr6_-_108582316 NM_003795 NM_152827	-231152	-	TSC_hg19_v1_chr6_-_108582245 BC015179 BC014580 AK289476	-231299	-	TSC_hg19_v1_chr6_+_108881027 NM_201559 BC020227 BC021224	67486	+	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	68538	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	68720	+	AF520418|LACE1|246269|lactation elevated 1##BC018445|LACE1|246269|lactation elevated 1##NM_145315|LACE1|246269|lactation elevated 1##NM_003795|SNX3|8724|sorting nexin 3##NM_152827|SNX3|8724|sorting nexin 3##BC015179|SNX3|8724|sorting nexin 3##BC014580|SNX3|8724|sorting nexin 3##AK289476|SNX3|8724|sorting nexin 3##NM_201559|FOXO3|2309|forkhead box O3##BC020227|FOXO3|2309|forkhead box O3##BC021224|FOXO3|2309|forkhead box O3##BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3	0.92393	CTCF.p2:3:0.924
chr7	29917837	29917942	reg1016399.p1	7.859	+	TSC_hg19_v1_chr7_+_29846126 NM_001080529	-71749	+	TSC_hg19_v1_chr7_+_29603500 BC018144	-314358	+	TSC_hg19_v1_chr7_+_29603450 BC029131 NM_175887	-314470	+	TSC_hg19_v1_chr7_-_30029417 AB071705 AK295713 D83777 AK293462 BC040492 NM_001145515 NM_014766 NM_001145513	111619	-	AK295172 NM_001145514	112015	-	CU675039 DQ892525 DQ895737 TSC_hg19_v1_chr7_-_30066286 AK000738 NM_017946 AK309552 AY358643 BC005206	148332	-	NM_001080529|WIPF3|644150|WAS/WASL interacting protein family, member 3##BC018144|PRR15|222171|proline rich 15##BC029131|PRR15|222171|proline rich 15##NM_175887|PRR15|222171|proline rich 15##AB071705|SCRN1|9805|secernin 1##AK295713|SCRN1|9805|secernin 1##D83777|SCRN1|9805|secernin 1##AK293462|SCRN1|9805|secernin 1##BC040492|SCRN1|9805|secernin 1##NM_001145515|SCRN1|9805|secernin 1##NM_014766|SCRN1|9805|secernin 1##NM_001145513|SCRN1|9805|secernin 1##AK295172|SCRN1|9805|secernin 1##NM_001145514|SCRN1|9805|secernin 1##DQ892525|FKBP14|55033|FK506 binding protein 14, 22 kDa##DQ895737|FKBP14|55033|FK506 binding protein 14, 22 kDa##AK000738|FKBP14|55033|FK506 binding protein 14, 22 kDa##NM_017946|FKBP14|55033|FK506 binding protein 14, 22 kDa##AK309552|FKBP14|55033|FK506 binding protein 14, 22 kDa##AY358643|FKBP14|55033|FK506 binding protein 14, 22 kDa##BC005206|FKBP14|55033|FK506 binding protein 14, 22 kDa	0.762315	CTCF.p2:-8:0.762
chrX	152952653	152952726	reg1022817.p2	7.859	+	AK309148 AK296203 NM_001039582 TSC_hg19_v1_chrX_-_152939817	-12895	-	BC033746 AK296067 TSC_hg19_v1_chrX_-_152939308 BC064422	-13361	-	AK303746 NM_001135740	-13947	-	BC081558 NM_001142805 NM_005629	1062	+	AK295495 NM_001142806	2276	+	AK223059 TSC_hg19_v1_chrX_-_152989354	36647	-	AK309148|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK296203|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##NM_001039582|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##BC033746|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK296067|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##BC064422|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK303746|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##NM_001135740|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##BC081558|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8##NM_001142805|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8##NM_005629|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8##AK295495|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8##NM_001142806|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8##AK223059|BCAP31|10134|B-cell receptor-associated protein 31	0.905308	CTCF.p2:1:0.905
chr11	64216409	64216545	reg1018130.p2	7.858	+	TSC_hg19_v1_chr11_+_64126642 AK223561 NM_001006944 NM_003942 AJ010119 AK292163 AK313567 BC047896 AK298507 BC028079 CU690526 AF074715	-89746	+	TSC_hg19_v1_chr11_+_64120348 AK126728	-96118	+	TSC_hg19_v1_chr11_+_64107692 BC151218 BC151222 NM_032251 AK090436 BC140822 BC140824 BC141866	-108775	+	AK290791 BC034384 NM_018484 AK129930	106648	+	AB050269 NM_144585 NM_153378	141804	+	BC043422 TSC_hg19_v1_chr11_-_64377473	160925	-	AK223561|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_001006944|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_003942|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AJ010119|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK292163|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK313567|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC047896|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK298507|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC028079|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AF074715|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK126728|CCDC88B|283234|coiled-coil domain containing 88B##BC151218|CCDC88B|283234|coiled-coil domain containing 88B##BC151222|CCDC88B|283234|coiled-coil domain containing 88B##NM_032251|CCDC88B|283234|coiled-coil domain containing 88B##AK090436|CCDC88B|283234|coiled-coil domain containing 88B##BC140822|CCDC88B|283234|coiled-coil domain containing 88B##BC140824|CCDC88B|283234|coiled-coil domain containing 88B##BC141866|CCDC88B|283234|coiled-coil domain containing 88B##AK290791|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##BC034384|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##NM_018484|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AK129930|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AB050269|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_144585|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_153378|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12	0.992734	CTCF.p2:-14:0.993
chr2	147419216	147419320	reg1016441.p2	7.858	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-2141347	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-2141637	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-2144065	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	1182849	+	TSC_hg19_v1_chr2_+_148602300 AK314124	1183067	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	1183377	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.947015	CTCF.p2:-6:0.947
chr14	58000060	58000198	reg1020406.p1	7.855	+	HQ258368 BC117405 BC143565 BC143566 BC143567 BC143568 AK307238 AK223127 AK001512 BC028060 NM_018168	-39626	-	TSC_hg19_v1_chr14_+_57857318 BC118589 BC122557	-142797	+	AK296372 AK092674 AX747665 NM_001011713 TSC_hg19_v1_chr14_+_57857298 AK304257 AK307348	-142846	+	NM_001206920	332462	-	BC146861 BX161411 NM_001001872 AK292605 BX161448 TSC_hg19_v1_chr14_-_58618906	618727	-	TSC_hg19_v1_chr14_-_58618916 AK292513	618795	-	HQ258368|C14orf105|55195|chromosome 14 open reading frame 105##BC117405|C14orf105|55195|chromosome 14 open reading frame 105##BC143565|C14orf105|55195|chromosome 14 open reading frame 105##BC143566|C14orf105|55195|chromosome 14 open reading frame 105##BC143567|C14orf105|55195|chromosome 14 open reading frame 105##BC143568|C14orf105|55195|chromosome 14 open reading frame 105##AK307238|C14orf105|55195|chromosome 14 open reading frame 105##AK223127|C14orf105|55195|chromosome 14 open reading frame 105##AK001512|C14orf105|55195|chromosome 14 open reading frame 105##BC028060|C14orf105|55195|chromosome 14 open reading frame 105##NM_018168|C14orf105|55195|chromosome 14 open reading frame 105##BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK296372|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK092674|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##NM_001011713|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK304257|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK307348|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##NM_001206920|SLC35F4|341880|solute carrier family 35, member F4##BC146861|C14orf37|145407|chromosome 14 open reading frame 37##BX161411|C14orf37|145407|chromosome 14 open reading frame 37##NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37##AK292605|C14orf37|145407|chromosome 14 open reading frame 37##BX161448|C14orf37|145407|chromosome 14 open reading frame 37##AK292513|C14orf37|145407|chromosome 14 open reading frame 37	0.99082	CTCF.p2:-8:0.991
chr7	122848969	122849090	reg1017828.p1	7.855	+	AB528233 AK026413 AK314537 AF260824 BC111775 NM_022444	-9018	-	BC095524 NM_016945	-213276	-	TSC_hg19_v1_chr7_-_122526793 NM_001009571 NM_001167940 NM_017954	-322233	-	BC091520 BC128181 BC128182 AK093153 AX747958 BC032838 BC068607 NM_178827	325615	-	CR933664 BT006695 TSC_hg19_v1_chr7_-_123197862 AK022209 BC020821 BC070236 BC070237 U64028 AK315458 U53468 BC000813 NM_005000	348861	-	AF428257 BC100874 BC100875 BC100876 BC100877 NM_080928	400064	+	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##BC095524|TAS2R16|50833|taste receptor, type 2, member 16##NM_016945|TAS2R16|50833|taste receptor, type 2, member 16##NM_001009571|CADPS2|93664|Ca++-dependent secretion activator 2##NM_001167940|CADPS2|93664|Ca++-dependent secretion activator 2##NM_017954|CADPS2|93664|Ca++-dependent secretion activator 2##BC091520|IQUB|154865|IQ motif and ubiquitin domain containing##BC128181|IQUB|154865|IQ motif and ubiquitin domain containing##BC128182|IQUB|154865|IQ motif and ubiquitin domain containing##AK093153|IQUB|154865|IQ motif and ubiquitin domain containing##BC032838|IQUB|154865|IQ motif and ubiquitin domain containing##BC068607|IQUB|154865|IQ motif and ubiquitin domain containing##NM_178827|IQUB|154865|IQ motif and ubiquitin domain containing##CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15##NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15	0.71939	CTCF.p2:21:0.719
chr7	131630274	131630383	reg1015752.p1	7.855	+	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	-388965	-	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-617689	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	-617722	+	TSC_hg19_v1_chr7_-_131833385 AL834504	203067	-	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	562592	-	AK123428 TSC_hg19_v1_chr7_-_132261230	630902	-	BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AL834504|PLXNA4|91584|plexin A4##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4##AK123428|PLXNA4|91584|plexin A4	0.491992	CTCF.p2:-15:0.471
chrX	82263591	82263689	reg1017131.p1	7.855	+	TSC_hg19_v1_chrX_+_80457600 BC016709 AL136718 AK129610 AF042081 AK310011 AB590910 CR533478	-1805992	+	TSC_hg19_v1_chrX_+_80457572 AK309351	-1806064	+	AK094058 AX748432 NM_030763	-1806200	-	AK314967 NM_000307 TSC_hg19_v1_chrX_+_82763302 X82324 AB464667	499659	+	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	852531	+	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	1179332	-	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5##AK314967|POU3F4|5456|POU class 3 homeobox 4##NM_000307|POU3F4|5456|POU class 3 homeobox 4##X82324|POU3F4|5456|POU class 3 homeobox 4##BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	0.962521	CTCF.p2:-9:0.963
chr12	78130506	78130636	reg1019954.p1	7.854	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-671282	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-857788	-	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	-972545	+	NM_014903 AJ488201	94561	+	AK094616 NM_001135805	1127201	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	1127904	+	BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17##NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I	0.097234	
chr4	2714099	2714250	reg1020465.p1	7.854	+	AB000459 AB000460 AB000461 NM_003704 BC136646 BC144337 BC144339 BC144340	-87001	+	NM_001185009 BC031935	-242994	+	TSC_hg19_v1_chr4_+_2470846 AK312534 AK309509 U95140	-243298	+	AK026176 NM_001161527	43576	-	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	43889	-	TSC_hg19_v1_chr4_+_2794755 AK225497 NM_001122681 BC022996	80561	+	AB000459|FAM193A|8603|family with sequence similarity 193, member A##AB000460|FAM193A|8603|family with sequence similarity 193, member A##AB000461|FAM193A|8603|family with sequence similarity 193, member A##NM_003704|FAM193A|8603|family with sequence similarity 193, member A##BC136646|FAM193A|8603|family with sequence similarity 193, member A##BC144337|FAM193A|8603|family with sequence similarity 193, member A##BC144339|FAM193A|8603|family with sequence similarity 193, member A##BC144340|FAM193A|8603|family with sequence similarity 193, member A##NM_001185009|RNF4|6047|ring finger protein 4##BC031935|RNF4|6047|ring finger protein 4##AK312534|RNF4|6047|ring finger protein 4##AK309509|RNF4|6047|ring finger protein 4##U95140|RNF4|6047|ring finger protein 4##AK026176|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001161527|TNIP2|79155|TNFAIP3 interacting protein 2##AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2##AK225497|SH3BP2|6452|SH3-domain binding protein 2##NM_001122681|SH3BP2|6452|SH3-domain binding protein 2##BC022996|SH3BP2|6452|SH3-domain binding protein 2	0.191625	
chr1	168051628	168051734	reg1016939.p2	7.853	+	AL035304 NM_001143674 NM_015415	-145390	-	AF116725 AY766164 TSC_hg19_v1_chr1_+_167906117 DQ768089 AB385156	-145581	+	TSC_hg19_v1_chr1_+_167905933 AK297847 AK226181	-145728	+	AK056040 BC028163 NM_153832	53940	-	AK298797 TSC_hg19_v1_chr1_-_168105936	54239	-	AK299634 TSC_hg19_v1_chr1_-_168106613	54893	-	AL035304|BRP44|25874|brain protein 44##NM_001143674|BRP44|25874|brain protein 44##NM_015415|BRP44|25874|brain protein 44##AF116725|DCAF6|55827|DDB1 and CUL4 associated factor 6##AY766164|DCAF6|55827|DDB1 and CUL4 associated factor 6##DQ768089|DCAF6|55827|DDB1 and CUL4 associated factor 6##AK297847|DCAF6|55827|DDB1 and CUL4 associated factor 6##AK226181|DCAF6|55827|DDB1 and CUL4 associated factor 6##AK056040|GPR161|23432|G protein-coupled receptor 161##BC028163|GPR161|23432|G protein-coupled receptor 161##NM_153832|GPR161|23432|G protein-coupled receptor 161##AK298797|GPR161|23432|G protein-coupled receptor 161##AK299634|GPR161|23432|G protein-coupled receptor 161	0.992736	CTCF.p2:-6:0.993
chr1	206781594	206781718	reg1017494.p1	7.853	+	TSC_hg19_v1_chr1_+_206730897 CU692112 EU831661	-50759	+	AL832784 AY261332 AK292039 TSC_hg19_v1_chr1_+_206730613	-51048	+	TSC_hg19_v1_chr1_+_206730542 BC042651 AY216268	-51136	+	DQ891590 DQ894784 TSC_hg19_v1_chr1_-_206785812 BC039134 BC058905 AK225259 BC001585 AF220417 AF262403 AK294536 AK001852	4099	-	TSC_hg19_v1_chr1_-_206785905 NM_001201478 NM_006893	4227	-	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	27188	+	EU831661|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AL832784|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY261332|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AK292039|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC042651|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY216268|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##DQ891590|EIF2D|1939|eukaryotic translation initiation factor 2D##DQ894784|EIF2D|1939|eukaryotic translation initiation factor 2D##BC039134|EIF2D|1939|eukaryotic translation initiation factor 2D##BC058905|EIF2D|1939|eukaryotic translation initiation factor 2D##AK225259|EIF2D|1939|eukaryotic translation initiation factor 2D##BC001585|EIF2D|1939|eukaryotic translation initiation factor 2D##AF220417|EIF2D|1939|eukaryotic translation initiation factor 2D##AF262403|EIF2D|1939|eukaryotic translation initiation factor 2D##AK294536|EIF2D|1939|eukaryotic translation initiation factor 2D##AK001852|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_001201478|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_006893|EIF2D|1939|eukaryotic translation initiation factor 2D##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3	0.988983	CTCF.p2:-7:0.989
chr15	86775508	86775643	reg1018662.p1	7.853	+	NM_152336	-90334	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-437380	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-437478	-	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	2024391	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	2235053	-	AB049944 NM_022839 NM_176805	2235108	+	NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11	0.0	
chr8	146120948	146121044	reg1016509.p1	7.853	+	TSC_hg19_v1_chr8_-_146078881 NM_001081003	-42095	-	TSC_hg19_v1_chr8_-_146078452 NM_001081004 NM_014066	-42546	-	TSC_hg19_v1_chr8_-_146078434 AK001477 BC002672	-42568	-	TSC_hg19_v1_chr8_-_146126839 AK294282 BX648173 AK095705 AB208810 BC017091 AK054888 NM_001109689 NM_021061 BC107579	5823	-	TSC_hg19_v1_chr8_-_146176267 BC010996 AK226016 AK096815 AK127625 DQ117529 NM_001029976 NM_006958	55251	-	AK128723 TSC_hg19_v1_chr8_-_146202735	81736	-	NM_001081003|COMMD5|28991|COMM domain containing 5##NM_001081004|COMMD5|28991|COMM domain containing 5##NM_014066|COMMD5|28991|COMM domain containing 5##AK001477|COMMD5|28991|COMM domain containing 5##BC002672|COMMD5|28991|COMM domain containing 5##AK294282|ZNF250|58500|zinc finger protein 250##BX648173|ZNF250|58500|zinc finger protein 250##AK095705|ZNF250|58500|zinc finger protein 250##AB208810|ZNF250|58500|zinc finger protein 250##BC017091|ZNF250|58500|zinc finger protein 250##AK054888|ZNF250|58500|zinc finger protein 250##NM_001109689|ZNF250|58500|zinc finger protein 250##NM_021061|ZNF250|58500|zinc finger protein 250##BC107579|ZNF250|58500|zinc finger protein 250##BC010996|ZNF16|7564|zinc finger protein 16##AK226016|ZNF16|7564|zinc finger protein 16##AK096815|ZNF16|7564|zinc finger protein 16##AK127625|ZNF16|7564|zinc finger protein 16##DQ117529|ZNF16|7564|zinc finger protein 16##NM_001029976|ZNF16|7564|zinc finger protein 16##NM_006958|ZNF16|7564|zinc finger protein 16##AK128723|ZNF252|286101|zinc finger protein 252	0.111491	
chr10	72024997	72025112	reg1017239.p1	7.852	+	AF108211 AB590125 AF217186 DQ893597 AB026723 TSC_hg19_v1_chr10_-_71993148 BC107882 AF154065 BC105034 BC105036 AF092439 AF119665 BC001022 BC061581 AK058193 NM_021129	-31901	-	TSC_hg19_v1_chr10_-_71930260 AK298591 AK312469 BC003658 AF274026 AF087897 AF217959 AF261717 AY008268 AL136724 NM_001142648 NM_020150	-94775	-	TSC_hg19_v1_chr10_-_71906457 BC047424 NM_001040273 NM_173555	-118574	-	NM_022146	18395	-	TSC_hg19_v1_chr10_-_72083680 AL122117	58644	-	BC024001 AY358318 NM_207119	116326	-	AF108211|PPA1|5464|pyrophosphatase (inorganic) 1##AF217186|PPA1|5464|pyrophosphatase (inorganic) 1##DQ893597|PPA1|5464|pyrophosphatase (inorganic) 1##AB026723|PPA1|5464|pyrophosphatase (inorganic) 1##BC107882|PPA1|5464|pyrophosphatase (inorganic) 1##AF154065|PPA1|5464|pyrophosphatase (inorganic) 1##BC105034|PPA1|5464|pyrophosphatase (inorganic) 1##BC105036|PPA1|5464|pyrophosphatase (inorganic) 1##AF092439|PPA1|5464|pyrophosphatase (inorganic) 1##AF119665|PPA1|5464|pyrophosphatase (inorganic) 1##BC001022|PPA1|5464|pyrophosphatase (inorganic) 1##BC061581|PPA1|5464|pyrophosphatase (inorganic) 1##AK058193|PPA1|5464|pyrophosphatase (inorganic) 1##NM_021129|PPA1|5464|pyrophosphatase (inorganic) 1##AK298591|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AK312469|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##BC003658|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF274026|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF087897|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF217959|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF261717|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AY008268|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AL136724|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##NM_001142648|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##NM_020150|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##BC047424|TYSND1|219743|trypsin domain containing 1##NM_001040273|TYSND1|219743|trypsin domain containing 1##NM_173555|TYSND1|219743|trypsin domain containing 1##NM_022146|NPFFR1|64106|neuropeptide FF receptor 1##AL122117|LRRC20|55222|leucine rich repeat containing 20##BC024001|LRRC20|55222|leucine rich repeat containing 20##AY358318|LRRC20|55222|leucine rich repeat containing 20##NM_207119|LRRC20|55222|leucine rich repeat containing 20	0.114302	
chr15	59704927	59705082	reg1017244.p1	7.852	+	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	-39934	-	TSC_hg19_v1_chr15_-_59665065 AK291688	-39938	-	AB290177 TSC_hg19_v1_chr15_-_59665055	-39950	-	TSC_hg19_v1_chr15_+_59730403 BC022537 NM_152450 AK299220 AK307975	25346	+	TSC_hg19_v1_chr15_+_59903981 NM_004751 EF152283	198979	+	TSC_hg19_v1_chr15_+_59904093 BC017032	199102	+	BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##AB290177|MYO1E|4643|myosin IE##BC022537|FAM81A|145773|family with sequence similarity 81, member A##NM_152450|FAM81A|145773|family with sequence similarity 81, member A##AK299220|FAM81A|145773|family with sequence similarity 81, member A##AK307975|FAM81A|145773|family with sequence similarity 81, member A##NM_004751|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##EF152283|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##BC017032|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type	0.972005	CTCF.p2:-24:0.972
chr1	71515791	71515932	reg1016558.p2	7.852	+	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	-2482	-	TSC_hg19_v1_chr1_+_70876950 NM_001190463 NM_001902 NM_153742 AK310269 AK303946 AK223376 BC015807 S52028 S52784 EU832313 EU832398 BT006882	-638881	+	TSC_hg19_v1_chr1_+_70820493 NM_001031693 NM_001036645 NM_001036646 AF126164 BC010922 AF126163	-695284	+	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	30846	-	NM_005455 NM_203350	31110	-	TSC_hg19_v1_chr1_-_72748182 AK295481 BX538014 AK092307 AX747470 NM_173808	1232350	-	AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001190463|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001902|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_153742|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK310269|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK303946|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK223376|CTH|1491|cystathionase (cystathionine gamma-lyase)##BC015807|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52028|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52784|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832313|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832398|CTH|1491|cystathionase (cystathionine gamma-lyase)##BT006882|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001031693|HHLA3|11147|HERV-H LTR-associating 3##NM_001036645|HHLA3|11147|HERV-H LTR-associating 3##NM_001036646|HHLA3|11147|HERV-H LTR-associating 3##AF126164|HHLA3|11147|HERV-H LTR-associating 3##BC010922|HHLA3|11147|HERV-H LTR-associating 3##AF126163|HHLA3|11147|HERV-H LTR-associating 3##EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK295481|NEGR1|257194|neuronal growth regulator 1##BX538014|NEGR1|257194|neuronal growth regulator 1##AK092307|NEGR1|257194|neuronal growth regulator 1##NM_173808|NEGR1|257194|neuronal growth regulator 1	0.950468	CTCF.p2:22:0.950
chr2	44570143	44570244	reg1017493.p2	7.852	+	NM_000341 BC022386 AK309145 AK313157 AB033549 AK091932 AK289636 L11696 M95548 AK223146 BC093624 BC093626 D82326 CU692594 DQ892031 DQ895222 DQ023513 DQ023515 DQ023516 DQ023517	-67558	+	TSC_hg19_v1_chr2_+_44396066 AL833035	-174083	+	TSC_hg19_v1_chr2_+_44396013 NM_001033556 NM_001033557 NM_002706 NM_177968 NM_177969 AK056009 AK291214 DQ023508 DQ023509 DQ023510 DQ023511 BC064381 AJ271832 AJ271835 BC012002	-174178	+	BC143061 BC143062 DQ023506 DQ023507 NM_001042385 NM_001042386	16677	-	DQ023503 DQ023504 DQ023505 NM_006036	17619	-	AB007896 TSC_hg19_v1_chr2_-_44588634 BC151236 AK025649 NM_001171606 NM_001171613	18487	-	NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AL833035|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_001033556|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_001033557|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_002706|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177968|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177969|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK056009|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK291214|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023508|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023509|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023510|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023511|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC064381|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271832|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271835|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC012002|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC143061|PREPL|9581|prolyl endopeptidase-like##BC143062|PREPL|9581|prolyl endopeptidase-like##DQ023506|PREPL|9581|prolyl endopeptidase-like##DQ023507|PREPL|9581|prolyl endopeptidase-like##NM_001042385|PREPL|9581|prolyl endopeptidase-like##NM_001042386|PREPL|9581|prolyl endopeptidase-like##DQ023503|PREPL|9581|prolyl endopeptidase-like##DQ023504|PREPL|9581|prolyl endopeptidase-like##DQ023505|PREPL|9581|prolyl endopeptidase-like##NM_006036|PREPL|9581|prolyl endopeptidase-like##AB007896|PREPL|9581|prolyl endopeptidase-like##BC151236|PREPL|9581|prolyl endopeptidase-like##AK025649|PREPL|9581|prolyl endopeptidase-like##NM_001171606|PREPL|9581|prolyl endopeptidase-like##NM_001171613|PREPL|9581|prolyl endopeptidase-like	0.193197	
chr6	145252693	145252824	reg1017134.p2	7.852	+	NM_007124 X69086	-639840	+	TSC_hg19_v1_chr6_+_144607461 AK292506	-645278	+	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	-781037	+	AK124757 TSC_hg19_v1_chr6_+_146056061	803276	+	TSC_hg19_v1_chr6_-_146056437 AJ130763 AJ130764	803655	-	AF454494 TSC_hg19_v1_chr6_-_146056628 AF454493 BC005286 AF084535	803843	-	NM_007124|UTRN|7402|utrophin##X69086|UTRN|7402|utrophin##AK292506|UTRN|7402|utrophin##NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11##AK124757|LOC100507557|100507557|uncharacterized LOC100507557##AJ130763|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AJ130764|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454494|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454493|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##BC005286|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF084535|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	0.976785	CTCF.p2:0:0.977
chr18	41167635	41167771	reg1019026.p1	7.851	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-310274	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-472134	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-1632470	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	1092411	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	1093165	+	NM_001242692 AK292422	1625249	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.983916	CTCF.p2:12:0.984
chr20	31593011	31593139	reg1018001.p1	7.851	+	BC029528 AF401350 BC026118 NM_080675	-841	-	TSC_hg19_v1_chr20_+_31407780 AK312590 BC128442	-185279	+	TSC_hg19_v1_chr20_+_31407759 NM_012325 AK297273 BC106068 U24166 BC109281 BC040410	-185340	+	TSC_hg19_v1_chr20_+_31595393 AK172819 AK027068 NM_025227	2326	+	TSC_hg19_v1_chr20_+_31595480 AY358723 AK304064	2406	+	TSC_hg19_v1_chr20_+_31595513 BC034415	2446	+	BC029528|SUN5|140732|Sad1 and UNC84 domain containing 5##AF401350|SUN5|140732|Sad1 and UNC84 domain containing 5##BC026118|SUN5|140732|Sad1 and UNC84 domain containing 5##NM_080675|SUN5|140732|Sad1 and UNC84 domain containing 5##AK312590|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC128442|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##NM_012325|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##AK297273|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC106068|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##U24166|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC109281|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC040410|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##AK172819|BPIFB2|80341|BPI fold containing family B, member 2##AK027068|BPIFB2|80341|BPI fold containing family B, member 2##NM_025227|BPIFB2|80341|BPI fold containing family B, member 2##AY358723|BPIFB2|80341|BPI fold containing family B, member 2##AK304064|BPIFB2|80341|BPI fold containing family B, member 2##BC034415|BPIFB2|80341|BPI fold containing family B, member 2	0.997853	CTCF.p2:5:0.998
chr2	156167226	156167381	reg1016551.p2	7.851	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-612114	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-1438859	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-1832052	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	1019387	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	1021860	-	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	1124655	+	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	0.0	
chr19	40118411	40118548	reg1020213.p1	7.850	+	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	-25294	+	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	-87659	-	TSC_hg19_v1_chr19_-_40023460 BC040157 BC051333 AK096263 NM_152361 BC009725	-94992	-	FJ613352 NM_001190441	28066	+	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	76564	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	110160	-	BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC040157|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##BC051333|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##AK096263|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##NM_152361|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##BC009725|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein	0.010482	
chr8	43131433	43131537	reg1018014.p1	7.850	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-135838	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-135852	+	TSC_hg19_v1_chr8_+_42995606 NM_152419	-135905	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	16120	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	5042010	+	TSC_hg19_v1_chr8_+_48173521 AK303579	5042034	+	BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_152419|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146	0.013479	
chr10	32151300	32151424	reg1016285.p1	7.849	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-541273	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-543229	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-543405	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	66362	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	66423	-	TSC_hg19_v1_chr10_-_32344938 AB462413	193570	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.057721	
chr12	78079065	78079158	reg1016084.p1	7.849	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-619822	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-806328	-	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	-921085	+	NM_014903 AJ488201	146021	+	AK094616 NM_001135805	1178661	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	1179364	+	BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17##NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I	0.947041	CTCF.p2:7:0.947
chr16	56885952	56886114	reg1018494.p1	7.849	+	AK294176 NM_001242796	-68644	+	NM_001242795 AK056637 TSC_hg19_v1_chr16_+_56815740	-70298	+	TSC_hg19_v1_chr16_+_56764089 D42085 AF086282 BC034346 AK292262	-121948	+	AK315298 NM_000339 NM_001126107 NM_001126108 AK223133 X91220 U44128 AB463268	13099	+	NM_001010989 NM_001010990 NM_014685	79714	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	80108	+	AK294176|NUP93|9688|nucleoporin 93kDa##NM_001242796|NUP93|9688|nucleoporin 93kDa##NM_001242795|NUP93|9688|nucleoporin 93kDa##AK056637|NUP93|9688|nucleoporin 93kDa##D42085|NUP93|9688|nucleoporin 93kDa##AF086282|NUP93|9688|nucleoporin 93kDa##BC034346|NUP93|9688|nucleoporin 93kDa##AK292262|NUP93|9688|nucleoporin 93kDa##AK315298|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_000339|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126107|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126108|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK223133|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##X91220|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##U44128|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	0.532831	CTCF.p2:6:0.533
chr2	122568964	122569075	reg1016876.p2	7.848	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-55782	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-74554	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-161374	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	2213845	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	4844688	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	4844773	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.96663	CTCF.p2:-15:0.967
chr2	63416218	63416309	reg1015517.p2	7.848	+	NM_014562 TSC_hg19_v1_chr2_+_63277964 AK095680 AK297308 BC007621	-138298	+	NM_001199770	-139072	+	BC029477 NM_001142614	-482233	+	TSC_hg19_v1_chr2_-_63815560 AK310290	399277	-	TSC_hg19_v1_chr2_-_63815583 BX538331 AK055030 AL833623	399354	-	NM_005917	399479	+	NM_014562|OTX1|5013|orthodenticle homeobox 1##AK095680|OTX1|5013|orthodenticle homeobox 1##AK297308|OTX1|5013|orthodenticle homeobox 1##BC007621|OTX1|5013|orthodenticle homeobox 1##NM_001199770|OTX1|5013|orthodenticle homeobox 1##BC029477|EHBP1|23301|EH domain binding protein 1##NM_001142614|EHBP1|23301|EH domain binding protein 1##AK310290|WDPCP|51057|WD repeat containing planar cell polarity effector##BX538331|WDPCP|51057|WD repeat containing planar cell polarity effector##AK055030|WDPCP|51057|WD repeat containing planar cell polarity effector##AL833623|WDPCP|51057|WD repeat containing planar cell polarity effector##NM_005917|MDH1|4190|malate dehydrogenase 1, NAD (soluble)	0.015714	
chr11	64646038	64646136	reg1016680.p1	7.847	+	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	-105	-	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	-33998	-	AJ297488 AJ297489 NM_130803 NM_130804	-67322	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	67	-	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	1074	-	AB384474 TSC_hg19_v1_chr11_-_64684682 AB007864 AK126181 AK300925 AK307684 BC113090 BC113091 BC110650 NM_015104	38576	-	AY007161|EHD1|10938|EH-domain containing 1##AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1##AB007864|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##AK126181|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##AK300925|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##AK307684|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##BC113090|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##BC113091|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##BC110650|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##NM_015104|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)	0.118246	
chr2	239165313	239165474	reg1019226.p1	7.847	+	TSC_hg19_v1_chr2_-_239148680 BC007939 AK075040 AK293111 NM_001142853 NM_018645	-16735	-	AB035179 AB463715 TSC_hg19_v1_chr2_-_239148612 AF260237	-16815	-	TSC_hg19_v1_chr2_-_239140231 AK057399	-25160	-	AB002345 AK294876 NM_022817 TSC_hg19_v1_chr2_-_239197345	31827	-	TSC_hg19_v1_chr2_+_239229037 AF242456	63666	+	TSC_hg19_v1_chr2_+_239229202 BC059174 NM_001139490 NM_015650	63782	+	BC007939|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AK075040|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AK293111|HES6|55502|hairy and enhancer of split 6 (Drosophila)##NM_001142853|HES6|55502|hairy and enhancer of split 6 (Drosophila)##NM_018645|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AB035179|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AF260237|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AK057399|LOC151174|151174|uncharacterized LOC151174##AB002345|PER2|8864|period homolog 2 (Drosophila)##AK294876|PER2|8864|period homolog 2 (Drosophila)##NM_022817|PER2|8864|period homolog 2 (Drosophila)##AF242456|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##BC059174|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##NM_001139490|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##NM_015650|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1	0.990508	CTCF.p2:-47:0.991
chr5	140947208	140947329	reg1016865.p1	7.847	+	AL050086 TSC_hg19_v1_chr5_-_140895550	-51786	-	TSC_hg19_v1_chr5_+_140868721 BC112081 BC112083 AF152339 AF152526 NM_018929 NM_032407	-78504	+	TSC_hg19_v1_chr5_+_140864626 BC042650 AF152338 AF152525 BC101035 BC101037 BC101038 NM_018928 NM_032406 BC101036	-82584	+	AF051782 AY363395 AB384958 DQ067453 TSC_hg19_v1_chr5_-_140998497 BC117257 BC143413 BC143414	51230	-	TSC_hg19_v1_chr5_-_140998562 AB209482	51293	-	TSC_hg19_v1_chr5_-_140998564 AK304291	51296	-	AL050086|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC112081|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC112083|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152339|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152526|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_018929|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_032407|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF051782|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AY363395|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##DQ067453|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC117257|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143413|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143414|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AB209482|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AK304291|DIAPH1|1729|diaphanous homolog 1 (Drosophila)	0.999377	CTCF.p2:2:0.999
chr8	66944708	66944823	reg1017049.p2	7.847	+	NM_033105 BC016742 AF368276 AL133660	-10946	+	TSC_hg19_v1_chr8_-_66754300 AK292680	-190473	-	NM_001242318	-190797	-	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	94575	+	BC002599 BC011031 AK075431 NM_000756	146002	-	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	396541	+	NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AK292680|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	0.719062	CTCF.p2:-1:0.719
chr1	3612305	3612418	reg1014338.p1	7.846	+	TSC_hg19_v1_chr1_+_3607235 AB055065 AB055066 AY040827 AY040828 AY040829 NM_001126240 NM_001126241 NM_001126242 NM_001204189 NM_001204190 NM_001204191 AK304177 AK304784	-5103	+	TSC_hg19_v1_chr1_+_3569108 BC117251 BC117253 NM_001204184 NM_001204185 NM_001204186 NM_001204187 NM_001204188 NM_005427 Y11416	-43235	+	CU678066 AB034912 AK000437 AK225525 BC002611 BC086311 TSC_hg19_v1_chr1_-_3566668 AK302397 NM_017818	-45745	-	AK310432 NM_001204192 AK302118	2254	+	TSC_hg19_v1_chr1_-_3663940 AB007964 BC035073 BC062467 BC089039	51556	-	AK057387 BC112112 NM_152492 BC112108	56602	+	AB055065|TP73|7161|tumor protein p73##AB055066|TP73|7161|tumor protein p73##AY040827|TP73|7161|tumor protein p73##AY040828|TP73|7161|tumor protein p73##AY040829|TP73|7161|tumor protein p73##NM_001126240|TP73|7161|tumor protein p73##NM_001126241|TP73|7161|tumor protein p73##NM_001126242|TP73|7161|tumor protein p73##NM_001204189|TP73|7161|tumor protein p73##NM_001204190|TP73|7161|tumor protein p73##NM_001204191|TP73|7161|tumor protein p73##AK304177|TP73|7161|tumor protein p73##AK304784|TP73|7161|tumor protein p73##BC117251|TP73|7161|tumor protein p73##BC117253|TP73|7161|tumor protein p73##NM_001204184|TP73|7161|tumor protein p73##NM_001204185|TP73|7161|tumor protein p73##NM_001204186|TP73|7161|tumor protein p73##NM_001204187|TP73|7161|tumor protein p73##NM_001204188|TP73|7161|tumor protein p73##NM_005427|TP73|7161|tumor protein p73##Y11416|TP73|7161|tumor protein p73##AB034912|WRAP73|49856|WD repeat containing, antisense to TP73##AK000437|WRAP73|49856|WD repeat containing, antisense to TP73##AK225525|WRAP73|49856|WD repeat containing, antisense to TP73##BC002611|WRAP73|49856|WD repeat containing, antisense to TP73##BC086311|WRAP73|49856|WD repeat containing, antisense to TP73##AK302397|WRAP73|49856|WD repeat containing, antisense to TP73##NM_017818|WRAP73|49856|WD repeat containing, antisense to TP73##AK310432|TP73|7161|tumor protein p73##NM_001204192|TP73|7161|tumor protein p73##AK302118|TP73|7161|tumor protein p73##AB007964|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC035073|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC089039|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##AK057387|CCDC27|148870|coiled-coil domain containing 27##BC112112|CCDC27|148870|coiled-coil domain containing 27##NM_152492|CCDC27|148870|coiled-coil domain containing 27##BC112108|CCDC27|148870|coiled-coil domain containing 27	0.572173	CTCF.p2:2:0.572
chr22	41929340	41929450	reg1013767.p1	7.846	+	TSC_hg19_v1_chr22_+_41865120 AK293562 AK297213 AK301321 AK314845 AK302691 AK296260 BC026196 BC014092 NM_001098 U80040 CR456365 AB385022 CR536568 CU012932 CU013220 DQ893674 DQ895836	-64264	+	AB489147 CU012956 CU013244 EU446678 TSC_hg19_v1_chr22_-_41864681 BC075808 CR456398 BC007321 NM_032758	-64711	-	TSC_hg19_v1_chr22_-_41842881 NM_016272	-86456	-	TSC_hg19_v1_chr22_-_41940381 AB051452 BC088367 BC017248	10958	-	TSC_hg19_v1_chr22_-_41940495 AY092087 AK026524 AK129663 NM_138338 NM_001018050 NM_001018052 CR456459	11105	-	TSC_hg19_v1_chr22_+_41957014 NM_014460 AK313407 BC067113 AL834417	27674	+	AK293562|ACO2|50|aconitase 2, mitochondrial##AK297213|ACO2|50|aconitase 2, mitochondrial##AK301321|ACO2|50|aconitase 2, mitochondrial##AK314845|ACO2|50|aconitase 2, mitochondrial##AK302691|ACO2|50|aconitase 2, mitochondrial##AK296260|ACO2|50|aconitase 2, mitochondrial##BC026196|ACO2|50|aconitase 2, mitochondrial##BC014092|ACO2|50|aconitase 2, mitochondrial##NM_001098|ACO2|50|aconitase 2, mitochondrial##U80040|ACO2|50|aconitase 2, mitochondrial##CR456365|ACO2|50|aconitase 2, mitochondrial##CR536568|ACO2|50|aconitase 2, mitochondrial##CU012932|ACO2|50|aconitase 2, mitochondrial##CU013220|ACO2|50|aconitase 2, mitochondrial##DQ893674|ACO2|50|aconitase 2, mitochondrial##DQ895836|ACO2|50|aconitase 2, mitochondrial##CU012956|PHF5A|84844|PHD finger protein 5A##CU013244|PHF5A|84844|PHD finger protein 5A##EU446678|PHF5A|84844|PHD finger protein 5A##BC075808|PHF5A|84844|PHD finger protein 5A##CR456398|PHF5A|84844|PHD finger protein 5A##BC007321|PHF5A|84844|PHD finger protein 5A##NM_032758|PHF5A|84844|PHD finger protein 5A##NM_016272|TOB2|10766|transducer of ERBB2, 2##AB051452|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC088367|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC017248|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AY092087|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK026524|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK129663|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_138338|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018050|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018052|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##CR456459|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_014460|CSDC2|27254|cold shock domain containing C2, RNA binding##AK313407|CSDC2|27254|cold shock domain containing C2, RNA binding##BC067113|CSDC2|27254|cold shock domain containing C2, RNA binding##AL834417|CSDC2|27254|cold shock domain containing C2, RNA binding	0.999495	CTCF.p2:18:0.999
chr10	47336864	47336983	reg1017907.p2	7.845	+	BC171820 BC171845 BC171847 NM_001190810	-123298	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	-155239	-	AB590156 CU687256 DQ893430 DQ896775 M81844 AK296573 AK300139 AK300158 BC021910 BC004376 NM_001098845 AK296976 Z36830 BC073755 NM_001040084 AK298761	-162904	-	NM_001630 BC008813 BC073755 AK096715 AK313626 X16662 BC029890 AK300191 AK223149 AK307182 CU679125 CU687256	410092	+	NM_018232	557099	+	BC171820 BC171845 BC171847 NM_001190810	878800	+	BC171845|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171847|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##NM_001190810|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##DQ893430|ANXA8L2|244|annexin A8-like 2##DQ896775|ANXA8|653145|annexin A8##M81844|ANXA8|653145|annexin A8##AK296573|ANXA8|653145|annexin A8##AK300139|ANXA8|653145|annexin A8##AK300158|ANXA8|653145|annexin A8##BC004376|ANXA8|653145|annexin A8##NM_001098845|ANXA8L1|728113|annexin A8-like 1##Z36830|ANXA8|653145|annexin A8##BC073755|ANXA8|653145|annexin A8##NM_001040084|ANXA8|653145|annexin A8##AK298761|ANXA8|653145|annexin A8##NM_001630|ANXA8L2|244|annexin A8-like 2##BC008813|ANXA8L2|244|annexin A8-like 2##BC073755|ANXA8|653145|annexin A8##AK313626|ANXA8L2|244|annexin A8-like 2##X16662|ANXA8L2|244|annexin A8-like 2##AK300191|ANXA8L2|244|annexin A8-like 2##AK223149|ANXA8L2|244|annexin A8-like 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##BC171845|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171847|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##NM_001190810|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9	0.611645	CTCF.p2:3:0.612
chr1	159184080	159184192	reg1016417.p2	7.845	+	NM_001122951 U01839	-9088	+	AK291593 NM_002036	-10334	+	AK289541 NM_021189 TSC_hg19_v1_chr1_+_159141404 AK308915 NM_001127173 AF363367 AY358332 AF062733 BC033819 AY046418 AF529206 DQ890848 DQ894002	-42671	+	NM_002001 X06948	75367	+	AB529279 NM_001004467	100312	-	BC112290 BC112292 NM_012351 BC069150	225393	+	NM_001122951|DARC|2532|Duffy blood group, chemokine receptor##U01839|DARC|2532|Duffy blood group, chemokine receptor##AK291593|DARC|2532|Duffy blood group, chemokine receptor##NM_002036|DARC|2532|Duffy blood group, chemokine receptor##AK289541|CADM3|57863|cell adhesion molecule 3##NM_021189|CADM3|57863|cell adhesion molecule 3##AK308915|CADM3|57863|cell adhesion molecule 3##NM_001127173|CADM3|57863|cell adhesion molecule 3##AF363367|CADM3|57863|cell adhesion molecule 3##AY358332|CADM3|57863|cell adhesion molecule 3##AF062733|CADM3|57863|cell adhesion molecule 3##BC033819|CADM3|57863|cell adhesion molecule 3##AY046418|CADM3|57863|cell adhesion molecule 3##AF529206|CADM3|57863|cell adhesion molecule 3##DQ890848|CADM3|57863|cell adhesion molecule 3##DQ894002|CADM3|57863|cell adhesion molecule 3##NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide##X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide##NM_001004467|OR10J3|441911|olfactory receptor, family 10, subfamily J, member 3##BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	0.464098	CTCF.p2:1:0.464
chr1	74464164	74464287	reg1017066.p1	7.845	+	TSC_hg19_v1_chr1_-_72748491 AY358132	-1715720	-	TSC_hg19_v1_chr1_-_72748182 AK295481 BX538014 AK092307 AX747470 NM_173808	-1716014	-	NM_005455 NM_203350	-2917254	-	AK131476 BC020778 BX647210 TSC_hg19_v1_chr1_-_74663861 NM_001105659	199623	-	NM_001112808 NM_001199327 NM_001199328 NM_001199329 NM_003838 TSC_hg19_v1_chr1_+_74663927 BC020720 AK294948 AF017445 AK304490 BC032865 AK223254 BC032308 AK299468	199711	+	NM_015978 AF116826 AK307984 BC113539 BC117262 AY303691 HQ258528	236877	+	AK295481|NEGR1|257194|neuronal growth regulator 1##BX538014|NEGR1|257194|neuronal growth regulator 1##AK092307|NEGR1|257194|neuronal growth regulator 1##NM_173808|NEGR1|257194|neuronal growth regulator 1##NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK131476|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BC020778|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BX647210|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001105659|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001112808|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199327|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199328|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_001199329|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_003838|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC020720|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK294948|FPGT|8790|fucose-1-phosphate guanylyltransferase##AF017445|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK304490|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032865|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##AK223254|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032308|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK299468|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_015978|TNNI3K|51086|TNNI3 interacting kinase##AF116826|TNNI3K|51086|TNNI3 interacting kinase##AK307984|TNNI3K|51086|TNNI3 interacting kinase##BC113539|TNNI3K|51086|TNNI3 interacting kinase##BC117262|TNNI3K|51086|TNNI3 interacting kinase##AY303691|TNNI3K|51086|TNNI3 interacting kinase##HQ258528|TNNI3K|51086|TNNI3 interacting kinase	0.999631	CTCF.p2:18:1.000
chr5	134901989	134902112	reg1018339.p1	7.845	+	BC008687 BC028226 NM_006161 TSC_hg19_v1_chr5_-_134871655 AB593107 AK314280	-30404	-	AK131088 AB161513 NM_001099221	-114013	-	CU686932 BC074831 BC074832 BC069608 BC069610 BC117156 BC117158 AB074498 NM_130848	-119133	-	AF086340 AF073957 AF144103 BT007080 AB528117 AM392840 AF106911 BC003513 AY358906 TSC_hg19_v1_chr5_-_134914682 AB543622 AK075514	12523	-	NM_004887	12918	-	AK126812 NM_145282 BC025747	268339	+	BC008687|NEUROG1|4762|neurogenin 1##BC028226|NEUROG1|4762|neurogenin 1##NM_006161|NEUROG1|4762|neurogenin 1##AB593107|NEUROG1|4762|neurogenin 1##AB161513|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##NM_001099221|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##BC074831|C5orf20|140947|chromosome 5 open reading frame 20##BC074832|C5orf20|140947|chromosome 5 open reading frame 20##BC069608|C5orf20|140947|chromosome 5 open reading frame 20##BC069610|C5orf20|140947|chromosome 5 open reading frame 20##BC117156|C5orf20|140947|chromosome 5 open reading frame 20##BC117158|C5orf20|140947|chromosome 5 open reading frame 20##AB074498|C5orf20|140947|chromosome 5 open reading frame 20##NM_130848|C5orf20|140947|chromosome 5 open reading frame 20##AF086340|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF073957|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF144103|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BT007080|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AM392840|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF106911|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BC003513|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AY358906|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AB543622|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AK075514|CXCL14|9547|chemokine (C-X-C motif) ligand 14##NM_004887|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AK126812|SLC25A48|153328|solute carrier family 25, member 48##NM_145282|SLC25A48|153328|solute carrier family 25, member 48##BC025747|SLC25A48|153328|solute carrier family 25, member 48	0.999579	CTCF.p2:-2:1.000
chr7	153737011	153737117	reg1014248.p1	7.845	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	-152664	+	TSC_hg19_v1_chr7_+_152456872 NM_001040135 NM_020445 AK315534 BC008682 AK294292 AK316078 AF086920 BC015207 AF023453 CU677239 CU679037 DQ894754 EU176295	-1280171	+	AB590731 CU692064 TSC_hg19_v1_chr7_-_152373227 BC042137 AK313607 Y08837 AF035587 NM_005431	-1363856	-	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	12694	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	265321	+	TSC_hg19_v1_chr7_+_154720213 BC033053 AK311721 AK056609 BC050402	983133	+	BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##NM_001040135|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##NM_020445|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK315534|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC008682|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK294292|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK316078|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF086920|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC015207|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF023453|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##DQ894754|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##EU176295|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC042137|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AK313607|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##Y08837|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AF035587|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##NM_005431|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6##BC033053|LOC100132707|100132707|uncharacterized LOC100132707##AK311721|LOC100132707|100132707|uncharacterized LOC100132707##AK056609|LOC100132707|100132707|uncharacterized LOC100132707##BC050402|LOC100132707|100132707|uncharacterized LOC100132707	0.976868	CTCF.p2:25:0.977
chr12	16229645	16229750	reg1017729.p1	7.844	+	TSC_hg19_v1_chr12_+_16064282 AK024614 AK222541 AK296697	-165406	+	TSC_hg19_v1_chr12_+_16064265 BC056234	-165441	+	BC041328 NM_015954 TSC_hg19_v1_chr12_+_16064223	-165531	+	NM_001170798	200921	-	NM_145792	270378	+	TSC_hg19_v1_chr12_+_16500585 BC062473 NM_020300 AK291148 AK309707 BC005923 BC056863 NM_145791	270922	+	AK024614|DERA|51071|deoxyribose-phosphate aldolase (putative)##AK222541|DERA|51071|deoxyribose-phosphate aldolase (putative)##AK296697|DERA|51071|deoxyribose-phosphate aldolase (putative)##BC056234|DERA|51071|deoxyribose-phosphate aldolase (putative)##BC041328|DERA|51071|deoxyribose-phosphate aldolase (putative)##NM_015954|DERA|51071|deoxyribose-phosphate aldolase (putative)##NM_001170798|SLC15A5|729025|solute carrier family 15, member 5##NM_145792|MGST1|4257|microsomal glutathione S-transferase 1##NM_020300|MGST1|4257|microsomal glutathione S-transferase 1##AK291148|MGST1|4257|microsomal glutathione S-transferase 1##AK309707|MGST1|4257|microsomal glutathione S-transferase 1##BC005923|MGST1|4257|microsomal glutathione S-transferase 1##BC056863|MGST1|4257|microsomal glutathione S-transferase 1##NM_145791|MGST1|4257|microsomal glutathione S-transferase 1	0.58891	CTCF.p2:-14:0.589
chr14	38455194	38455310	reg1017479.p1	7.844	+	TSC_hg19_v1_chr14_-_38064444 NM_004496	-390788	-	TSC_hg19_v1_chr14_-_38064316 AK313785	-390936	-	AB463645 CU689794 AM392863 AM393239 AM393310 AM393369 TSC_hg19_v1_chr14_-_38064234 BC033890	-391046	-	TSC_hg19_v1_chr14_+_38677186 BX248780 NM_001049	221942	+	AK290868 TSC_hg19_v1_chr14_+_38678303 BC035618	223048	+	AB384936 DQ893328 DQ896644 TSC_hg19_v1_chr14_+_38678642	223367	+	NM_004496|FOXA1|3169|forkhead box A1##AK313785|FOXA1|3169|forkhead box A1##AM392863|FOXA1|3169|forkhead box A1##AM393239|FOXA1|3169|forkhead box A1##AM393310|FOXA1|3169|forkhead box A1##AM393369|FOXA1|3169|forkhead box A1##BC033890|FOXA1|3169|forkhead box A1##BX248780|SSTR1|6751|somatostatin receptor 1##NM_001049|SSTR1|6751|somatostatin receptor 1##AK290868|SSTR1|6751|somatostatin receptor 1##BC035618|SSTR1|6751|somatostatin receptor 1##DQ893328|SSTR1|6751|somatostatin receptor 1##DQ896644|SSTR1|6751|somatostatin receptor 1	0.998457	CTCF.p2:3:0.998
chr2	239069080	239069185	reg1016245.p2	7.844	+	NM_198582	-21770	+	NM_194312 AK124559	-60145	+	TSC_hg19_v1_chr2_+_238969747 BC000586 AK293283	-99365	+	CR533533 FJ491380 FJ491381 CU675457 AB590373 DQ892800 DQ896047 EU832279 EU832364 TSC_hg19_v1_chr2_-_239112267 AL136850 BC035746 AY024365	43107	-	TSC_hg19_v1_chr2_-_239112326 BC006576 HQ658059 HQ658060 NM_030768	43190	-	TSC_hg19_v1_chr2_-_239112354 AK001043	43212	-	NM_198582|KLHL30|377007|kelch-like 30 (Drosophila)##NM_194312|ESPNL|339768|espin-like##AK124559|ESPNL|339768|espin-like##BC000586|SCLY|51540|selenocysteine lyase##AK293283|SCLY|51540|selenocysteine lyase##CR533533|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##FJ491380|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##FJ491381|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##DQ892800|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##DQ896047|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##EU832279|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##EU832364|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##AL136850|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##BC035746|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##AY024365|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##BC006576|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##HQ658059|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##HQ658060|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##NM_030768|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##AK001043|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase	0.971597	CTCF.p2:10:0.972
chr6	41246841	41246953	reg1016859.p1	7.843	+	AY358271 NM_198153 BC101780 BC105101 BC143652	-50829	+	AF534824 AK023755 BC125078 BC125079 AY358171 NM_024807	-77974	-	NM_018965 TSC_hg19_v1_chr6_-_41130927 AB062787	-115954	-	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	7527	-	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	56669	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	267262	+	AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##AF534824|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AK023755|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125078|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125079|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AY358171|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_024807|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_018965|TREM2|54209|triggering receptor expressed on myeloid cells 2##AB062787|TREM2|54209|triggering receptor expressed on myeloid cells 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4	0.293958	CTCF.p2:1:0.294
chr9	118912255	118912354	reg1017717.p1	7.843	+	AB022761 NM_017418	-1008208	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-1031831	-	AK313619 NM_001244 NM_001252290	-1219430	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	3766	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	537158	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	537302	+	AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32	0.051903	
chr14	23127237	23127346	reg1017019.p1	7.842	+	TSC_hg19_v1_chr14_+_23067208 AK022878 NM_022060 AX721056 BC024779 AK298127 AK301315 AK293198	-60102	+	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	-69157	-	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	-69205	-	BC112331 NM_005015 TSC_hg19_v1_chr14_+_23235896 AK294849 AK298249 BC001669 X80695 BX248295 BX248001	108554	+	TSC_hg19_v1_chr14_-_23284568 AK025377	157288	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	157341	-	AK022878|ABHD4|63874|abhydrolase domain containing 4##NM_022060|ABHD4|63874|abhydrolase domain containing 4##BC024779|ABHD4|63874|abhydrolase domain containing 4##AK298127|ABHD4|63874|abhydrolase domain containing 4##AK301315|ABHD4|63874|abhydrolase domain containing 4##AK293198|ABHD4|63874|abhydrolase domain containing 4##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC112331|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##NM_005015|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK294849|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK298249|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BC001669|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##X80695|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248295|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248001|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK025377|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	0.0	
chr19	43067618	43067744	reg1018323.p1	7.842	+	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	-35089	-	X16356 TSC_hg19_v1_chr19_-_43031473	-36272	-	BC093946 BC112095 AK292985 AY358433 NM_198477 AY598464	-120557	-	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	31349	-	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	176920	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	202143	-	M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17##BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17##NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17##DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8	0.578341	CTCF.p2:6:0.578
chr3	145907485	145907613	reg1017799.p1	7.842	+	TSC_hg19_v1_chr3_-_145879223 NM_000935 NM_182943	-28298	-	TSC_hg19_v1_chr3_-_145878972 BC037169 AB209879	-28593	-	AB527423 U84573 AK295084 TSC_hg19_v1_chr3_-_145878818	-28742	-	AY550971 TSC_hg19_v1_chr3_-_145968931 AK128442 AK292815 AF199023 AL833760 AK312809	61326	-	TSC_hg19_v1_chr3_-_145968970 BC028354 NM_001128306 NM_001177304 NM_020353	61415	-	AK301909 NM_001199978	279538	-	NM_000935|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_182943|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##BC037169|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AB209879|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##U84573|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AK295084|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AY550971|PLSCR4|57088|phospholipid scramblase 4##AK128442|PLSCR4|57088|phospholipid scramblase 4##AK292815|PLSCR4|57088|phospholipid scramblase 4##AF199023|PLSCR4|57088|phospholipid scramblase 4##AL833760|PLSCR4|57088|phospholipid scramblase 4##AK312809|PLSCR4|57088|phospholipid scramblase 4##BC028354|PLSCR4|57088|phospholipid scramblase 4##NM_001128306|PLSCR4|57088|phospholipid scramblase 4##NM_001177304|PLSCR4|57088|phospholipid scramblase 4##NM_020353|PLSCR4|57088|phospholipid scramblase 4##AK301909|PLSCR2|57047|phospholipid scramblase 2##NM_001199978|PLSCR2|57047|phospholipid scramblase 2	0.893611	CTCF.p2:-7:0.894
chr6	112350530	112350641	reg1016454.p1	7.842	+	TSC_hg19_v1_chr6_-_112194648 NM_002037	-155930	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	-156050	-	BC032496 NM_153048	-270277	-	BC012028 NM_003880 BC035250 NM_198239 BC105940 BC105941 AY358349 AF100781 AY358350 AB075040	24832	+	AF201334 CU689114 CU692994 DQ891503 DQ894695 BC025405 TSC_hg19_v1_chr6_-_112408705 BC031101 AK026242 NM_016262	58120	-	NM_001033564 TSC_hg19_v1_chr6_+_112408818 BC044912 AL049461	58196	+	NM_002037|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3##AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF201334|TUBE1|51175|tubulin, epsilon 1##DQ891503|TUBE1|51175|tubulin, epsilon 1##DQ894695|TUBE1|51175|tubulin, epsilon 1##BC025405|TUBE1|51175|tubulin, epsilon 1##BC031101|TUBE1|51175|tubulin, epsilon 1##AK026242|TUBE1|51175|tubulin, epsilon 1##NM_016262|TUBE1|51175|tubulin, epsilon 1##NM_001033564|C6orf225|619208|chromosome 6 open reading frame 225##BC044912|C6orf225|619208|chromosome 6 open reading frame 225##AL049461|C6orf225|619208|chromosome 6 open reading frame 225	0.983423	CTCF.p2:20:0.983
chr3	167068158	167068310	reg1020616.p1	7.841	+	NM_000055 TSC_hg19_v1_chr3_-_165555283	-1512967	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	-1513041	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	-2153729	-	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	29843	-	AK226025 AB006423 NM_006217 AK293391	123586	-	BC035512 NM_178824	303054	-	NM_000055|BCHE|590|butyrylcholinesterase##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing##AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##BC035512|WDR49|151790|WD repeat domain 49##NM_178824|WDR49|151790|WD repeat domain 49	0.622601	CTCF.p2:11:0.623
chr1	40123822	40123940	reg1016796.p1	7.840	+	TSC_hg19_v1_chr1_-_40105343 NM_014571	-18536	-	AF311885 EU446871 TSC_hg19_v1_chr1_-_40105307 AB463718 AJ272215 BC006087	-18565	-	TSC_hg19_v1_chr1_-_40098640 AK300463	-25226	-	AF331801 AY028778 BC103879 BC103880 NM_032526	13828	-	TSC_hg19_v1_chr1_-_40157103 BC030827 AL136591 NM_016257 AK294412 AK312314 AK294813	33221	-	NM_001195007 NM_006112 NM_203456 TSC_hg19_v1_chr1_+_40204553 AK313666 BC008451 AL833576 AF104012 AF104013 AK094660 AK304694 BC107736	80657	+	NM_014571|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AF311885|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##EU446871|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AJ272215|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##BC006087|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AK300463|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AF331801|NT5C1A|84618|5'-nucleotidase, cytosolic IA##AY028778|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC103879|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC103880|NT5C1A|84618|5'-nucleotidase, cytosolic IA##NM_032526|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC030827|HPCAL4|51440|hippocalcin like 4##AL136591|HPCAL4|51440|hippocalcin like 4##NM_016257|HPCAL4|51440|hippocalcin like 4##AK294412|HPCAL4|51440|hippocalcin like 4##AK312314|HPCAL4|51440|hippocalcin like 4##AK294813|HPCAL4|51440|hippocalcin like 4##NM_001195007|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_006112|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_203456|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK313666|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC008451|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AL833576|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104012|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104013|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK094660|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK304694|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC107736|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)	0.999559	CTCF.p2:10:1.000
chr1	56326954	56327093	reg1017508.p2	7.840	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-645939	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-645987	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-821799	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	717996	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	718107	-	AK312439 TSC_hg19_v1_chr1_-_57045216	718194	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.963794	CTCF.p2:-28:0.964
chr17	38716642	38716771	reg1017149.p2	7.840	+	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	-58860	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-116887	+	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	-142582	-	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	5012	-	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	87364	-	BC069196 TSC_hg19_v1_chr17_-_38804818	88090	-	AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC069196|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.984293	CTCF.p2:-1:0.984
chr17	38755346	38755526	reg1016597.p2	7.840	+	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	-33718	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	-97590	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-155617	+	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	48634	-	BC069196 TSC_hg19_v1_chr17_-_38804818	49360	-	BX538083 EU832123 EU832217 BC032815 AK092967 AK308598 NM_152349	65914	-	BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC069196|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BX538083|KRT222|125113|keratin 222##EU832123|KRT222|125113|keratin 222##EU832217|KRT222|125113|keratin 222##BC032815|KRT222|125113|keratin 222##AK308598|KRT222|125113|keratin 222##NM_152349|KRT222|125113|keratin 222	0.0	
chr2	118572051	118572161	reg1016974.p1	7.839	+	NM_001178034 DQ857322 AK296490 NM_001004360 AY387785 AB040925 AB385475 DQ857323	-2652445	+	NM_001178037 DQ857321	-2749816	+	AK055256 BC038514 NM_001178036	-3352940	+	NM_006773 TSC_hg19_v1_chr2_+_118572276 BC024739	162	+	AK001467 TSC_hg19_v1_chr2_+_118572283	177	+	TSC_hg19_v1_chr2_+_118572298 BC003360 BC001238	211	+	NM_001178034|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857322|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK296490|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001004360|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AY387785|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AB040925|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857323|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178037|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857321|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_006773|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC024739|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##AK001467|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC003360|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC001238|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	1.283379	CTCF.p2:28:0.478	CTCF.p2:-36:0.806
chr2	130694065	130694200	reg1018373.p1	7.839	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-1617832	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-1766085	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-1845271	+	NM_032144 AL136727	43103	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	192726	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	208479	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.877287	CTCF.p2:-30:0.877
chr5	160962892	160963036	reg1017587.p1	7.839	+	AB018258 AK295081 AK090832 AX746642 NM_025153	-683833	-	AK025130 TSC_hg19_v1_chr5_-_160112393	-850625	-	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-1114061	+	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	12162	-	NM_000811	149693	+	AK289792 NM_000806 AK295160	311277	+	AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##AK025130|ATP10B|23120|ATPase, class V, type 10B##BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6##AK289792|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_000806|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK295160|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	0.969844	CTCF.p2:-2:0.970
chr14	55039187	55039302	reg1017171.p1	7.838	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	-4608	+	NM_001161576 NM_015589 BC057838 TSC_hg19_v1_chr14_+_55034359	-4900	+	AK315318 AK289478 TSC_hg19_v1_chr14_+_54976623 NM_006568 BC015063 U66469 CU677207 EU832831 GQ129438	-62633	+	TSC_hg19_v1_chr14_+_55168831 AB028976	129645	+	NM_001161577 BC021726	182283	+	AY137463 AY137464 AY137465 Z16418 S44049 CR536551 DQ892998 DQ896245 S43856 S44053 TSC_hg19_v1_chr14_-_55369545 Z29433 Z29434 U66095 BC025415 U19523 U66097 NM_000161 NM_001024024 NM_001024070 NM_001024071	330170	-	AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_001161576|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_015589|SAMD4A|23034|sterile alpha motif domain containing 4A##BC057838|SAMD4A|23034|sterile alpha motif domain containing 4A##AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1##AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1##NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1##BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1##U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1##EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1##GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1##AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_001161577|SAMD4A|23034|sterile alpha motif domain containing 4A##BC021726|SAMD4A|23034|sterile alpha motif domain containing 4A##AY137463|GCH1|2643|GTP cyclohydrolase 1##AY137464|GCH1|2643|GTP cyclohydrolase 1##AY137465|GCH1|2643|GTP cyclohydrolase 1##Z16418|GCH1|2643|GTP cyclohydrolase 1##S44049|GCH1|2643|GTP cyclohydrolase 1##CR536551|GCH1|2643|GTP cyclohydrolase 1##DQ892998|GCH1|2643|GTP cyclohydrolase 1##DQ896245|GCH1|2643|GTP cyclohydrolase 1##S43856|GCH1|2643|GTP cyclohydrolase 1##S44053|GCH1|2643|GTP cyclohydrolase 1##Z29433|GCH1|2643|GTP cyclohydrolase 1##Z29434|GCH1|2643|GTP cyclohydrolase 1##U66095|GCH1|2643|GTP cyclohydrolase 1##BC025415|GCH1|2643|GTP cyclohydrolase 1##U19523|GCH1|2643|GTP cyclohydrolase 1##U66097|GCH1|2643|GTP cyclohydrolase 1##NM_000161|GCH1|2643|GTP cyclohydrolase 1##NM_001024024|GCH1|2643|GTP cyclohydrolase 1##NM_001024070|GCH1|2643|GTP cyclohydrolase 1##NM_001024071|GCH1|2643|GTP cyclohydrolase 1	0.870133	CTCF.p2:-11:0.870
chr20	1378468	1378581	reg1018529.p1	7.838	+	TSC_hg19_v1_chr20_-_1373754 BC119733 BC119732 NM_000801 NM_001199786 NM_054014	-4742	-	TSC_hg19_v1_chr20_-_1373733 D28444 M34539 AK309026	-4802	-	TSC_hg19_v1_chr20_-_1373659 AF205192 AB241123 AB241124 AB241125 BT007066 CR407613 CR542168 DQ891819 AB463639 X52220 BC005147 BC001925	-4892	-	TSC_hg19_v1_chr20_-_1447490 AB590363 CU678204 DQ893189 DQ896513 AK001511 AF078856 AF086909 AF112211 AK223334 AK297403 AK315433 AF283774 AK223341	68953	-	TSC_hg19_v1_chr20_-_1447590 BC002801	69083	-	AK093845 NM_001206736 NM_016143 NM_018839	69812	-	BC119733|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC119732|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_000801|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_001199786|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_054014|FKBP1A|2280|FK506 binding protein 1A, 12kDa##D28444|FKBP1A|2280|FK506 binding protein 1A, 12kDa##M34539|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AK309026|FKBP1A-SDCBP2|100528031|FKBP1A-SDCBP2 readthrough (non-protein coding)##AF205192|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241123|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241124|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241125|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BT007066|FKBP1A|2280|FK506 binding protein 1A, 12kDa##CR407613|FKBP1A|2280|FK506 binding protein 1A, 12kDa##CR542168|FKBP1A|2280|FK506 binding protein 1A, 12kDa##DQ891819|FKBP1A|2280|FK506 binding protein 1A, 12kDa##X52220|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC005147|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC001925|FKBP1A|2280|FK506 binding protein 1A, 12kDa##DQ893189|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##DQ896513|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK001511|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF078856|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF086909|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF112211|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223334|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK297403|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK315433|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF283774|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223341|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##BC002801|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK093845|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_001206736|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_016143|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_018839|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	0.079981	
chr6	44598282	44598425	reg1019346.p1	7.838	+	TSC_hg19_v1_chr6_+_44355461 AK128737 AK299738 BC001568 AB007892 AB590067 CU674768 DQ891623 DQ894814 U86753	-242853	+	NM_001253 TSC_hg19_v1_chr6_+_44355294	-243081	+	NM_145026 AK058171	-287913	+	NM_001015051 NM_001024630 AF053952	697703	+	AF073930 NM_003599 TSC_hg19_v1_chr6_-_45345614 AK303838 BC035816 BC050384 NM_181356 AK313874	747322	-	TSC_hg19_v1_chr6_+_45389825 NM_004348	791512	+	AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_001253|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_145026|SPATS1|221409|spermatogenesis associated, serine-rich 1##AK058171|SPATS1|221409|spermatogenesis associated, serine-rich 1##NM_001015051|RUNX2|860|runt-related transcription factor 2##NM_001024630|RUNX2|860|runt-related transcription factor 2##AF053952|RUNX2|860|runt-related transcription factor 2##AF073930|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_003599|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK303838|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC035816|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC050384|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_181356|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK313874|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_004348|RUNX2|860|runt-related transcription factor 2	0.997002	CTCF.p2:-12:0.997
chr8	146127441	146127556	reg1016993.p2	7.838	+	TSC_hg19_v1_chr8_-_146126839 AK294282 BX648173 AK095705 AB208810 BC017091 AK054888 NM_001109689 NM_021061 BC107579	-679	-	TSC_hg19_v1_chr8_-_146078881 NM_001081003	-48597	-	TSC_hg19_v1_chr8_-_146078452 NM_001081004 NM_014066	-49048	-	TSC_hg19_v1_chr8_-_146176267 BC010996 AK226016 AK096815 AK127625 DQ117529 NM_001029976 NM_006958	48749	-	AK128723 TSC_hg19_v1_chr8_-_146202735	75234	-	TSC_hg19_v1_chr8_-_146228237 AK021796 AK294723	100732	-	AK294282|ZNF250|58500|zinc finger protein 250##BX648173|ZNF250|58500|zinc finger protein 250##AK095705|ZNF250|58500|zinc finger protein 250##AB208810|ZNF250|58500|zinc finger protein 250##BC017091|ZNF250|58500|zinc finger protein 250##AK054888|ZNF250|58500|zinc finger protein 250##NM_001109689|ZNF250|58500|zinc finger protein 250##NM_021061|ZNF250|58500|zinc finger protein 250##BC107579|ZNF250|58500|zinc finger protein 250##NM_001081003|COMMD5|28991|COMM domain containing 5##NM_001081004|COMMD5|28991|COMM domain containing 5##NM_014066|COMMD5|28991|COMM domain containing 5##BC010996|ZNF16|7564|zinc finger protein 16##AK226016|ZNF16|7564|zinc finger protein 16##AK096815|ZNF16|7564|zinc finger protein 16##AK127625|ZNF16|7564|zinc finger protein 16##DQ117529|ZNF16|7564|zinc finger protein 16##NM_001029976|ZNF16|7564|zinc finger protein 16##NM_006958|ZNF16|7564|zinc finger protein 16##AK128723|ZNF252|286101|zinc finger protein 252##AK294723|ZNF252|286101|zinc finger protein 252	0.062877	
chr19	14159492	14159596	reg1016936.p1	7.837	+	TSC_hg19_v1_chr19_+_14142622 BC028003 DQ891051 DQ894230 CU688366	-16897	+	AF265242 AY358876 TSC_hg19_v1_chr19_+_14142572	-16959	+	TSC_hg19_v1_chr19_+_14142542 AF053004 AF106912	-17030	+	NM_001145028	10426	-	TSC_hg19_v1_chr19_-_14201272 AY453840 NM_138352	41732	-	TSC_hg19_v1_chr19_-_14224999 AF208004 AF224718 NM_207518 AK292284 AF239744	65510	-	BC028003|IL27RA|9466|interleukin 27 receptor, alpha##DQ891051|IL27RA|9466|interleukin 27 receptor, alpha##DQ894230|IL27RA|9466|interleukin 27 receptor, alpha##AF265242|IL27RA|9466|interleukin 27 receptor, alpha##AY358876|IL27RA|9466|interleukin 27 receptor, alpha##AF053004|IL27RA|9466|interleukin 27 receptor, alpha##AF106912|IL27RA|9466|interleukin 27 receptor, alpha##NM_001145028|PALM3|342979|paralemmin 3##AY453840|SAMD1|90378|sterile alpha motif domain containing 1##NM_138352|SAMD1|90378|sterile alpha motif domain containing 1##AF208004|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF224718|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##NM_207518|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AK292284|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF239744|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha	0.585867	CTCF.p2:15:0.408
chr14	57533752	57533857	reg1018777.p1	7.836	+	AK314271 BC032579 NM_021728 AB593058	-256660	-	NM_172337 AB593056	-261441	-	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	-487259	+	CU691962 TSC_hg19_v1_chr14_-_57735388	201589	-	TSC_hg19_v1_chr14_-_57735546 U85946 AK295085 AK303531	201736	-	TSC_hg19_v1_chr14_-_57735559 BC041126 BC031298	201776	-	AK314271|OTX2|5015|orthodenticle homeobox 2##BC032579|OTX2|5015|orthodenticle homeobox 2##NM_021728|OTX2|5015|orthodenticle homeobox 2##AB593058|OTX2|5015|orthodenticle homeobox 2##NM_172337|OTX2|5015|orthodenticle homeobox 2##AB593056|OTX2|5015|orthodenticle homeobox 2##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101##U85946|EXOC5|10640|exocyst complex component 5##AK295085|EXOC5|10640|exocyst complex component 5##AK303531|EXOC5|10640|exocyst complex component 5##BC041126|EXOC5|10640|exocyst complex component 5##BC031298|EXOC5|10640|exocyst complex component 5	0.041145	
chr17	36338136	36338254	reg1018761.p1	7.836	+	NM_001123391 NM_032258 AK313329 AK302064 BC078140 BC071680 AK301823 AL136860 BC047739	-54202	+	TSC_hg19_v1_chr17_-_36105051 HM116553 HM116554 HM116555 HM116556 AK290131 AK296633 AK298393 BC017714 X58840 NM_000458 NM_001165923	-233144	-	AB528419 BT007126 CR536572 DQ891528 EU176615 TSC_hg19_v1_chr17_-_36104898	-233309	-	BC033670 BC047739 AL136860 AK301823 BC071680 BC078140 AK302064 AK313329 NM_001123391 NM_032258	10430	-	BC067792 TSC_hg19_v1_chr17_-_36413224	75042	-	NM_032351 AK293605 BC130382 BC130384 TSC_hg19_v1_chr17_+_36453120	114859	+	NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##AK313329|TBC1D3|729873|TBC1 domain family, member 3##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##HM116553|HNF1B|6928|HNF1 homeobox B##HM116554|HNF1B|6928|HNF1 homeobox B##HM116555|HNF1B|6928|HNF1 homeobox B##HM116556|HNF1B|6928|HNF1 homeobox B##AK290131|HNF1B|6928|HNF1 homeobox B##AK296633|HNF1B|6928|HNF1 homeobox B##AK298393|HNF1B|6928|HNF1 homeobox B##BC017714|HNF1B|6928|HNF1 homeobox B##X58840|HNF1B|6928|HNF1 homeobox B##NM_000458|HNF1B|6928|HNF1 homeobox B##NM_001165923|HNF1B|6928|HNF1 homeobox B##BT007126|HNF1B|6928|HNF1 homeobox B##CR536572|HNF1B|6928|HNF1 homeobox B##DQ891528|HNF1B|6928|HNF1 homeobox B##EU176615|HNF1B|6928|HNF1 homeobox B##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##AK302064|TBC1D3|729873|TBC1 domain family, member 3##AK313329|TBC1D3|729873|TBC1 domain family, member 3##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##BC067792|LOC440434|440434|aminopeptidase puromycin sensitive pseudogene##NM_032351|MRPL45|84311|mitochondrial ribosomal protein L45##AK293605|MRPL45|84311|mitochondrial ribosomal protein L45##BC130382|MRPL45|84311|mitochondrial ribosomal protein L45##BC130384|MRPL45|84311|mitochondrial ribosomal protein L45	0.243231	CTCF.p2:7:0.231
chr2	240874037	240874157	reg1020004.p1	7.836	+	TSC_hg19_v1_chr2_-_240323341 AK308791	-550749	-	TSC_hg19_v1_chr2_-_240322695 BC039904	-551399	-	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	-551449	-	AF453834 TSC_hg19_v1_chr2_-_240964750 CU678462 DQ891011 DQ894191 BC031332 AF087661 AB209440 AK290778 BC003417 AF087854	90664	-	TSC_hg19_v1_chr2_-_240964807 NM_004544	90715	-	NM_001005853 BC137561 BC137562	95778	-	AK308791|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##AF453834|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ891011|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ894191|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC031332|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087661|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AB209440|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AK290778|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC003417|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087854|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_004544|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_001005853|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137561|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137562|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2	0.112492	
chr4	78275058	78275169	reg1017609.p1	7.836	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-195620	+	TSC_hg19_v1_chr4_+_78078398 U47414	-196653	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	-196752	+	AF044197 NM_006419	157792	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	465431	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	508801	+	L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1	1.508545	CTCF.p2:-1:0.999	CTCF.p2:79:0.462
chrX	133278438	133278556	reg1016855.p1	7.836	+	TSC_hg19_v1_chrX_-_133119645 L47125 AK300168 NM_001164617 NM_001164618 NM_001164619 NM_004484	-158846	-	AB527294 CU690242 DQ349136 DQ349137 DQ349138 DQ893658 DQ895822 TSC_hg19_v1_chrX_-_133119622 Z37987 L47176 AK222761 AK222766 AK310689 BC035972 U50410	-158948	-	TSC_hg19_v1_chrX_-_132549514 AK312605 AY358507 BC017166	-729029	-	NM_001101357	92579	+	TSC_hg19_v1_chrX_+_133507317 AY157622 NM_001015877 NM_032335 NM_032458 AL832725 AK290095 AK303369 BC005994 AB058726	228880	+	TSC_hg19_v1_chrX_+_133594194 NM_000194 AK313435	315700	+	L47125|GPC3|2719|glypican 3##AK300168|GPC3|2719|glypican 3##NM_001164617|GPC3|2719|glypican 3##NM_001164618|GPC3|2719|glypican 3##NM_001164619|GPC3|2719|glypican 3##NM_004484|GPC3|2719|glypican 3##DQ349136|GPC3|2719|glypican 3##DQ349137|GPC3|2719|glypican 3##DQ349138|GPC3|2719|glypican 3##DQ893658|GPC3|2719|glypican 3##DQ895822|GPC3|2719|glypican 3##Z37987|GPC3|2719|glypican 3##L47176|GPC3|2719|glypican 3##AK222761|GPC3|2719|glypican 3##AK222766|GPC3|2719|glypican 3##AK310689|GPC3|2719|glypican 3##BC035972|GPC3|2719|glypican 3##U50410|GPC3|2719|glypican 3##AK312605|GPC4|2239|glypican 4##AY358507|GPC4|2239|glypican 4##BC017166|GPC4|2239|glypican 4##NM_001101357|CCDC160|347475|coiled-coil domain containing 160##AY157622|PHF6|84295|PHD finger protein 6##NM_001015877|PHF6|84295|PHD finger protein 6##NM_032335|PHF6|84295|PHD finger protein 6##NM_032458|PHF6|84295|PHD finger protein 6##AL832725|PHF6|84295|PHD finger protein 6##AK290095|PHF6|84295|PHD finger protein 6##AK303369|PHF6|84295|PHD finger protein 6##BC005994|PHF6|84295|PHD finger protein 6##AB058726|PHF6|84295|PHD finger protein 6##NM_000194|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##AK313435|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1	0.776596	CTCF.p2:-23:0.777
chr19	39443367	39443475	reg1017761.p2	7.835	+	AK057934 NM_148169	-95	-	TSC_hg19_v1_chr19_+_39421608 NM_021107 NM_033363 Y11681 BC007499 BC001617	-21818	+	NM_033362	-22074	+	BC012385 AF386743 NM_024907	22913	-	CU677033 TSC_hg19_v1_chr19_-_39522905	79478	-	TSC_hg19_v1_chr19_-_39523185 BC030060 AF436061 BC014527 NM_178820	79812	-	AK057934|FBXO17|115290|F-box protein 17##NM_148169|FBXO17|115290|F-box protein 17##NM_021107|MRPS12|6183|mitochondrial ribosomal protein S12##NM_033363|MRPS12|6183|mitochondrial ribosomal protein S12##Y11681|MRPS12|6183|mitochondrial ribosomal protein S12##BC007499|MRPS12|6183|mitochondrial ribosomal protein S12##BC001617|MRPS12|6183|mitochondrial ribosomal protein S12##NM_033362|MRPS12|6183|mitochondrial ribosomal protein S12##BC012385|FBXO17|115290|F-box protein 17##AF386743|FBXO17|115290|F-box protein 17##NM_024907|FBXO17|115290|F-box protein 17##BC030060|FBXO27|126433|F-box protein 27##AF436061|FBXO27|126433|F-box protein 27##BC014527|FBXO27|126433|F-box protein 27##NM_178820|FBXO27|126433|F-box protein 27	0.75118	CTCF.p2:-10:0.751
chr2	191500684	191500794	reg1017444.p2	7.835	+	TSC_hg19_v1_chr2_-_191399454 NM_001142645	-101273	-	AK296987 TSC_hg19_v1_chr2_-_191399436	-101312	-	AK098085 TSC_hg19_v1_chr2_+_191301120	-199669	+	TSC_hg19_v1_chr2_+_191513840 NM_005966 BC035724 AK292446	13227	+	AK289747 NM_014905 TSC_hg19_v1_chr2_+_191745546	244807	+	TSC_hg19_v1_chr2_+_191745547 BC038507 AB020645 AF158555	244818	+	NM_001142645|TMEM194B|100131211|transmembrane protein 194B##AK296987|TMEM194B|100131211|transmembrane protein 194B##AK098085|MFSD6|54842|major facilitator superfamily domain containing 6##NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK289747|GLS|2744|glutaminase##NM_014905|GLS|2744|glutaminase##BC038507|GLS|2744|glutaminase##AB020645|GLS|2744|glutaminase##AF158555|GLS|2744|glutaminase	0.974304	CTCF.p2:-17:0.974
chr18	71708091	71708216	reg1019531.p1	7.833	+	AF448838 BC050329 NM_001201465 NM_138966	-1173344	-	AF448839 NM_138999	-1175220	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	-1496423	-	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	106874	-	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	107641	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	251026	-	AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_182511|CBLN2|147381|cerebellin 2 precursor##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15##NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)	0.999745	CTCF.p2:-7:1.000
chr20	32535619	32535757	reg1017036.p1	7.833	+	TSC_hg19_v1_chr20_+_32399155 AB100261 BC033859 AY726594 AY329085	-136468	+	TSC_hg19_v1_chr20_+_32399127 NM_176812	-136602	+	BC132873 BC144188 BC157823 BC146811 BC094738 NM_032819 BC063492 BC040440 AB587355 HQ258664	-215892	+	TSC_hg19_v1_chr20_+_32581531 NM_007367 NM_016732	45791	+	TSC_hg19_v1_chr20_+_32581567 AK226085	45899	+	TSC_hg19_v1_chr20_+_32581716 BC103753 AK299766	46016	+	AB100261|CHMP4B|128866|charged multivesicular body protein 4B##BC033859|CHMP4B|128866|charged multivesicular body protein 4B##AY726594|CHMP4B|128866|charged multivesicular body protein 4B##AY329085|CHMP4B|128866|charged multivesicular body protein 4B##NM_176812|CHMP4B|128866|charged multivesicular body protein 4B##BC132873|ZNF341|84905|zinc finger protein 341##BC144188|ZNF341|84905|zinc finger protein 341##BC157823|ZNF341|84905|zinc finger protein 341##BC146811|ZNF341|84905|zinc finger protein 341##BC094738|ZNF341|84905|zinc finger protein 341##NM_032819|ZNF341|84905|zinc finger protein 341##BC063492|ZNF341|84905|zinc finger protein 341##BC040440|ZNF341|84905|zinc finger protein 341##HQ258664|ZNF341|84905|zinc finger protein 341##NM_007367|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##NM_016732|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK226085|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC103753|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK299766|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))	0.983972	CTCF.p2:-13:0.221	CTCF.p2:88:0.670
chr19	45752033	45752168	reg1020330.p1	7.832	+	AK225791 AK093466 AX748143 NM_138568	-14633	-	NM_212550 AK296695 TSC_hg19_v1_chr19_+_45682022	-70087	+	TSC_hg19_v1_chr19_-_45681496 FJ418644 BC001907 NM_024108 BC004450 AF161407	-70622	-	TSC_hg19_v1_chr19_+_45754522 NM_001199867 NM_031417 AB049127 AB088047	2427	+	TSC_hg19_v1_chr19_+_45754571 BC071948 AK075272 AY057448 AB058763 AY120867	2598	+	TSC_hg19_v1_chr19_-_45822843 BT006793 DQ890539 DQ893701	70808	-	AK225791|EXOC3L2|90332|exocyst complex component 3-like 2##AK093466|EXOC3L2|90332|exocyst complex component 3-like 2##NM_138568|EXOC3L2|90332|exocyst complex component 3-like 2##NM_212550|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3##AK296695|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3##FJ418644|TRAPPC6A|79090|trafficking protein particle complex 6A##BC001907|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_024108|TRAPPC6A|79090|trafficking protein particle complex 6A##BC004450|TRAPPC6A|79090|trafficking protein particle complex 6A##AF161407|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_001199867|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##NM_031417|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AB049127|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AB088047|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##BC071948|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AK075272|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AY057448|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AB058763|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AY120867|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##BT006793|CKM|1158|creatine kinase, muscle##DQ890539|CKM|1158|creatine kinase, muscle##DQ893701|CKM|1158|creatine kinase, muscle	0.152	
chr8	99176102	99176200	reg1014691.p1	7.832	+	BC011529 NM_015029	-46084	+	TSC_hg19_v1_chr8_+_99129543 NM_001145860 NM_001145861 X99302 AK291434	-46613	+	BC010280 TSC_hg19_v1_chr8_-_99129395 BC093059 BC012592 NM_005836 X95384	-46750	-	BC132687 BC144055 TSC_hg19_v1_chr8_-_99306600 AK024017 NM_024759	130448	-	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	263195	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	661696	-	BC011529|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015029|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001145860|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001145861|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##X99302|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##AK291434|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##BC010280|HRSP12|10247|heat-responsive protein 12##BC093059|HRSP12|10247|heat-responsive protein 12##BC012592|HRSP12|10247|heat-responsive protein 12##NM_005836|HRSP12|10247|heat-responsive protein 12##X95384|HRSP12|10247|heat-responsive protein 12##BC132687|NIPAL2|79815|NIPA-like domain containing 2##BC144055|NIPAL2|79815|NIPA-like domain containing 2##AK024017|NIPAL2|79815|NIPA-like domain containing 2##NM_024759|NIPAL2|79815|NIPA-like domain containing 2##BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3	0.952648	CTCF.p2:-22:0.953
chr9	74818256	74818402	reg1018178.p1	7.832	+	TSC_hg19_v1_chr9_+_74764417 CU690994 AK315988	-53877	+	TSC_hg19_v1_chr9_+_74764402 AB033084	-53930	+	AF095286 TSC_hg19_v1_chr9_+_74764386 AF019638	-53943	+	TSC_hg19_v1_chr9_+_74920350 AK095210	102022	+	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	161396	-	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	161771	-	AK315988|GDA|9615|guanine deaminase##AB033084|GDA|9615|guanine deaminase##AF095286|GDA|9615|guanine deaminase##AF019638|GDA|9615|guanine deaminase##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5	0.947503	CTCF.p2:-6:0.948
chr13	61699817	61699939	reg1020284.p1	7.831	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-728399	+	BX537910 NM_001146071 NM_030794	-729288	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-961777	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	289375	-	AK289924 NM_022843	289776	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	6104626	-	EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9	0.921401	CTCF.p2:-21:0.921
chr15	90038294	90038416	reg1014994.p1	7.831	+	TSC_hg19_v1_chr15_-_89878042 AK291281	-160312	-	BC050559 BC042571 NM_001126131 NM_002693 X98093 TSC_hg19_v1_chr15_-_89878036	-160334	-	TSC_hg19_v1_chr15_+_89787255 AK055176 BC140769 BC144483 BC004277	-251105	+	CU689056 AY257182 AF193809 NM_016321 BC015461 AK298252 AK298641 AF081497 AK301640 AK313238 BC030965 AK290899 AK310222	1440	-	TSC_hg19_v1_chr15_+_90118742 GQ227787 NM_152259	80423	+	TSC_hg19_v1_chr15_-_90198681 BC042063 NM_198525	160265	-	AK291281|POLG|5428|polymerase (DNA directed), gamma##BC050559|POLG|5428|polymerase (DNA directed), gamma##BC042571|POLG|5428|polymerase (DNA directed), gamma##NM_001126131|POLG|5428|polymerase (DNA directed), gamma##NM_002693|POLG|5428|polymerase (DNA directed), gamma##X98093|POLG|5428|polymerase (DNA directed), gamma##AK055176|FANCI|55215|Fanconi anemia, complementation group I##BC140769|FANCI|55215|Fanconi anemia, complementation group I##BC144483|FANCI|55215|Fanconi anemia, complementation group I##BC004277|FANCI|55215|Fanconi anemia, complementation group I##AY257182|RHCG|51458|Rh family, C glycoprotein##AF193809|RHCG|51458|Rh family, C glycoprotein##NM_016321|RHCG|51458|Rh family, C glycoprotein##BC015461|RHCG|51458|Rh family, C glycoprotein##AK298252|RHCG|51458|Rh family, C glycoprotein##AK298641|RHCG|51458|Rh family, C glycoprotein##AF081497|RHCG|51458|Rh family, C glycoprotein##AK301640|RHCG|51458|Rh family, C glycoprotein##AK313238|RHCG|51458|Rh family, C glycoprotein##BC030965|RHCG|51458|Rh family, C glycoprotein##AK290899|RHCG|51458|Rh family, C glycoprotein##AK310222|RHCG|51458|Rh family, C glycoprotein##GQ227787|C15orf42|90381|chromosome 15 open reading frame 42##NM_152259|C15orf42|90381|chromosome 15 open reading frame 42##BC042063|KIF7|374654|kinesin family member 7##NM_198525|KIF7|374654|kinesin family member 7	0.98974	CTCF.p2:-2:0.990
chr17	20943603	20943710	reg1018158.p1	7.831	+	CU686685 BC068597 NM_001004306	-144264	-	AK057473 TSC_hg19_v1_chr17_+_20771859 BC041488 EF565107	-171851	+	NM_001190790	-460620	+	TSC_hg19_v1_chr17_-_20946322 AB590105 AB028986 NM_015276	2616	-	TSC_hg19_v1_chr17_+_20978860 AB593144	35225	+	TSC_hg19_v1_chr17_+_21030251 NM_015510 AL117567 AF151851 BC004126 BC009679 AK124055 CR457124	86620	+	BC068597|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001004306|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2##AB028986|USP22|23326|ubiquitin specific peptidase 22##NM_015276|USP22|23326|ubiquitin specific peptidase 22##NM_015510|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AL117567|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AF151851|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC004126|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC009679|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AK124055|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##CR457124|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	0.248176	CTCF.p2:-16:0.248
chr6	143208098	143208250	reg1017658.p2	7.831	+	TSC_hg19_v1_chr6_+_142623443 BX640873	-584768	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-585105	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-697545	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	58154	-	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	173821	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	173862	+	BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1	0.307578	CTCF.p2:13:0.308
chr4	140149059	140149180	reg1018241.p1	7.830	+	TSC_hg19_v1_chr4_-_140098351 AK311505	-50782	-	U43188 NM_201999	-88516	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	-143508	-	BC037987 BC104173 BC104174 AF329088 AF484960 NM_032623	52296	-	CR457005 AF047184 TSC_hg19_v1_chr4_-_140216970 AF047435 AK291147 BC101798 BC112061	67854	-	BC107682 NM_001184986 NM_001184991 NM_002494	73253	-	U43188|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_201999|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC037987|C4orf49|84709|chromosome 4 open reading frame 49##BC104173|C4orf49|84709|chromosome 4 open reading frame 49##BC104174|C4orf49|84709|chromosome 4 open reading frame 49##AF329088|C4orf49|84709|chromosome 4 open reading frame 49##AF484960|C4orf49|84709|chromosome 4 open reading frame 49##NM_032623|C4orf49|84709|chromosome 4 open reading frame 49##CR457005|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF047184|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF047435|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AK291147|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC101798|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC112061|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC107682|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184986|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184991|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_002494|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa	0.0	
chr13	107863492	107863600	reg1017612.p1	7.829	+	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	-643061	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	-676197	-	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-1744955	+	NM_001080396	655913	-	NM_002312 X83441	1003583	-	AK292419 AK314844 BC037491 NM_206937	1004329	-	BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A##NM_002312|LIG4|3981|ligase IV, DNA, ATP-dependent##X83441|LIG4|3981|ligase IV, DNA, ATP-dependent##AK292419|LIG4|3981|ligase IV, DNA, ATP-dependent##AK314844|LIG4|3981|ligase IV, DNA, ATP-dependent##BC037491|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_206937|LIG4|3981|ligase IV, DNA, ATP-dependent	0.636276	CTCF.p2:-7:0.517
chr21	38362484	38362593	reg1018281.p1	7.829	+	TSC_hg19_v1_chr21_-_38353235 NM_001242785	-9298	-	AJ001864 TSC_hg19_v1_chr21_-_38352974	-9588	-	TSC_hg19_v1_chr21_-_38338991 AK307940 NM_001242784	-23679	-	TSC_hg19_v1_chr21_-_38362512 BC060787 D23672 NM_000411	142	-	AB037158 NM_018962	16324	+	AB463579 TSC_hg19_v1_chr21_+_38379101	16547	+	NM_001242785|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##AJ001864|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##AK307940|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_001242784|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##BC060787|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##D23672|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_000411|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##AB037158|DSCR6|53820|Down syndrome critical region gene 6##NM_018962|DSCR6|53820|Down syndrome critical region gene 6	0.956789	CTCF.p2:-5:0.957
chr2	16790428	16790549	reg1017792.p2	7.829	+	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-708321	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-708493	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	-708715	-	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	56656	-	DQ860102 NM_001099218	909217	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	931399	+	BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1	0.998918	CTCF.p2:2:0.999
chr3	125640712	125640832	reg1017645.p2	7.829	+	TSC_hg19_v1_chr3_+_125635451 BC032772 BC041080	-5316	+	TSC_hg19_v1_chr3_-_125314371 NM_022776	-326399	-	TSC_hg19_v1_chr3_-_125239050 NM_003794	-401719	-	BC073816 NM_001015050 NM_001195223	15111	-	AF231410 NM_001012337 BC141849 AK302014	47282	+	AK093380 AX748089 NM_001008487	134841	-	BC032772|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC041080|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##NM_022776|OSBPL11|114885|oxysterol binding protein-like 11##NM_003794|SNX4|8723|sorting nexin 4##BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like##AF231410|ROPN1B|152015|rhophilin associated tail protein 1B##NM_001012337|ROPN1B|152015|rhophilin associated tail protein 1B##BC141849|ROPN1B|152015|rhophilin associated tail protein 1B##AK093380|SLC41A3|54946|solute carrier family 41, member 3##NM_001008487|SLC41A3|54946|solute carrier family 41, member 3	0.989712	CTCF.p2:-7:0.990
chr7	140771182	140771295	reg1019263.p1	7.829	+	NM_053035 TSC_hg19_v1_chr7_-_140714792	-56452	-	TSC_hg19_v1_chr7_-_140714748 AF078858 BC105793	-56488	-	AF151897 AK024776 NM_016071	-56771	-	NM_001195278	2793	+	NM_018238 TSC_hg19_v1_chr7_+_141251215 AK304502 AK001704 AK299131 AK222769 AJ278150 BC009775	479919	+	TSC_hg19_v1_chr7_-_141401967 AB032973 NM_001080392 AB384573	630696	-	NM_053035|MRPS33|51650|mitochondrial ribosomal protein S33##AF078858|MRPS33|51650|mitochondrial ribosomal protein S33##BC105793|MRPS33|51650|mitochondrial ribosomal protein S33##AF151897|MRPS33|51650|mitochondrial ribosomal protein S33##AK024776|MRPS33|51650|mitochondrial ribosomal protein S33##NM_016071|MRPS33|51650|mitochondrial ribosomal protein S33##NM_001195278|LOC100507421|100507421|transmembrane protein 178-like##NM_018238|AGK|55750|acylglycerol kinase##AK304502|AGK|55750|acylglycerol kinase##AK001704|AGK|55750|acylglycerol kinase##AK299131|AGK|55750|acylglycerol kinase##AK222769|AGK|55750|acylglycerol kinase##AJ278150|AGK|55750|acylglycerol kinase##BC009775|AGK|55750|acylglycerol kinase##AB032973|KIAA1147|57189|KIAA1147##NM_001080392|KIAA1147|57189|KIAA1147	0.99627	CTCF.p2:-8:0.996
chr9	6568252	6568384	reg1018447.p1	7.829	+	TSC_hg19_v1_chr9_+_6413338 AF274049 AB071698 EU176286 EU176602 AB385208	-154913	+	TSC_hg19_v1_chr9_+_6413200 AK308433	-155121	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	-155174	+	BC111993 BC111995 M63635 D90239 M64590 AK314156 NM_000170	77309	-	AK310439 NM_001146696	152544	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	189349	+	AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK308433|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC111993|GLDC|2731|glycine dehydrogenase (decarboxylating)##BC111995|GLDC|2731|glycine dehydrogenase (decarboxylating)##M63635|GLDC|2731|glycine dehydrogenase (decarboxylating)##D90239|GLDC|2731|glycine dehydrogenase (decarboxylating)##M64590|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK314156|GLDC|2731|glycine dehydrogenase (decarboxylating)##NM_000170|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C	0.98822	CTCF.p2:12:0.988
chrX	57600273	57600454	reg1017770.p1	7.829	+	NM_174912 AK055766 BC073922 TSC_hg19_v1_chrX_+_57313185 CU687272 EU285560 BC048279	-287148	+	BC071694 NM_019003	-436306	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	-452435	-	NM_007157	17905	+	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	18097	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	336596	-	NM_174912|FAAH2|158584|fatty acid amide hydrolase 2##AK055766|FAAH2|158584|fatty acid amide hydrolase 2##BC073922|FAAH2|158584|fatty acid amide hydrolase 2##EU285560|FAAH2|158584|fatty acid amide hydrolase 2##BC048279|FAAH2|158584|fatty acid amide hydrolase 2##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A	0.997187	CTCF.p2:16:0.997
chr11	34489899	34490046	reg1020408.p1	7.828	+	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	-29423	+	TSC_hg19_v1_chr11_+_34460487 AK291585 NM_001752 BC110398 AK315350 X04076 BC112217 BC112219	-29498	+	TSC_hg19_v1_chr11_-_34379556 AK291744 NM_145804	-110417	-	AB528439 AK290817 AF115402 NM_001243081 NM_198381	43259	-	AK075197 AK290808 TSC_hg19_v1_chr11_-_34535310 AK074633 AF115403 AF049703 BC029743 AK312537 NM_001243080 NM_001422 DQ123839	45354	-	NM_001206615 NM_012153 TSC_hg19_v1_chr11_+_34642639	152641	+	AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase##AK291585|CAT|847|catalase##NM_001752|CAT|847|catalase##BC110398|CAT|847|catalase##AK315350|CAT|847|catalase##X04076|CAT|847|catalase##BC112217|CAT|847|catalase##BC112219|CAT|847|catalase##AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##AK290817|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115402|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243081|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_198381|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK075197|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK290808|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK074633|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115403|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF049703|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##BC029743|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK312537|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243080|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001422|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##DQ123839|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001206615|EHF|26298|ets homologous factor##NM_012153|EHF|26298|ets homologous factor	0.894682	CTCF.p2:0:0.895
chr12	85842474	85842571	reg1016544.p2	7.828	+	U31986 TSC_hg19_v1_chr12_+_85673999 BC010923 NM_006982	-168563	+	AK022365 NM_001079910 BC005399 BC093088 AK307799	-412399	+	AK126325 NM_001100917	-412468	-	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	387523	-	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	387715	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	425604	+	U31986|ALX1|8092|ALX homeobox 1##BC010923|ALX1|8092|ALX homeobox 1##NM_006982|ALX1|8092|ALX homeobox 1##AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK126325|TSPAN19|144448|tetraspanin 19##NM_001100917|TSPAN19|144448|tetraspanin 19##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin	0.953575	CTCF.p2:15:0.954
chr15	86374893	86375011	reg1017677.p2	7.828	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-36757	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-36855	-	AF127481 NM_144767	-154685	+	NM_152336	310289	+	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	2425014	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	2635676	-	NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46	0.971078	CTCF.p2:-12:0.971
chr13	42516957	42517089	reg1018371.p2	7.827	+	TSC_hg19_v1_chr13_+_42031690 BC038706 AF036549	-485323	+	TSC_hg19_v1_chr13_+_42031685 BC066334	-485340	+	TSC_hg19_v1_chr13_+_42031539 NM_014059	-485472	+	TSC_hg19_v1_chr13_-_42535066 AK095155	18057	-	TSC_hg19_v1_chr13_-_42535247 AB590583 BC131802 BC053674 NM_001009814 NM_015058	18166	-	AK289546 NM_001204504	97148	+	BC038706|C13orf15|28984|chromosome 13 open reading frame 15##AF036549|C13orf15|28984|chromosome 13 open reading frame 15##BC066334|C13orf15|28984|chromosome 13 open reading frame 15##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15##AK095155|KIAA0564|23078|KIAA0564##BC131802|KIAA0564|23078|KIAA0564##BC053674|KIAA0564|23078|KIAA0564##NM_001009814|KIAA0564|23078|KIAA0564##NM_015058|KIAA0564|23078|KIAA0564##AK289546|DGKH|160851|diacylglycerol kinase, eta##NM_001204504|DGKH|160851|diacylglycerol kinase, eta	0.17137	
chr6	153552300	153552439	reg1020409.p1	7.827	+	BC013117 NM_012419 AF202257 TSC_hg19_v1_chr6_-_153452453	-99949	-	TSC_hg19_v1_chr6_-_153323873 AK297671 NM_001114184 NM_019041	-228472	-	TSC_hg19_v1_chr6_-_153323849 AK095240	-228511	-	AB055767 TSC_hg19_v1_chr6_-_153603892	51522	-	DQ680044 NM_001145279 NM_001145280 EU340241 EU340242 EU340243 NM_001145281	779263	+	L29301 NM_000914 NM_001008503 NM_001008504 NM_001008505 NM_001145282 NM_001145283 NM_001145284 NM_001145285 NM_001145286 L25119 U12569 AB590577 AK309655 AK313901 AY225404 AY364230 AY036622 AY036623 AY309001 AY309005 AY309006 AY309007 AY309008 AY309009 BC074927 AY521028	808191	+	BC013117|RGS17|26575|regulator of G-protein signaling 17##NM_012419|RGS17|26575|regulator of G-protein signaling 17##AF202257|RGS17|26575|regulator of G-protein signaling 17##AK297671|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_001114184|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_019041|MTRF1L|54516|mitochondrial translational release factor 1-like##AK095240|MTRF1L|54516|mitochondrial translational release factor 1-like##DQ680044|OPRM1|4988|opioid receptor, mu 1##NM_001145279|OPRM1|4988|opioid receptor, mu 1##NM_001145280|OPRM1|4988|opioid receptor, mu 1##EU340241|OPRM1|4988|opioid receptor, mu 1##EU340242|OPRM1|4988|opioid receptor, mu 1##EU340243|OPRM1|4988|opioid receptor, mu 1##NM_001145281|OPRM1|4988|opioid receptor, mu 1##L29301|OPRM1|4988|opioid receptor, mu 1##NM_000914|OPRM1|4988|opioid receptor, mu 1##NM_001008503|OPRM1|4988|opioid receptor, mu 1##NM_001008504|OPRM1|4988|opioid receptor, mu 1##NM_001008505|OPRM1|4988|opioid receptor, mu 1##NM_001145282|OPRM1|4988|opioid receptor, mu 1##NM_001145283|OPRM1|4988|opioid receptor, mu 1##NM_001145284|OPRM1|4988|opioid receptor, mu 1##NM_001145285|OPRM1|4988|opioid receptor, mu 1##NM_001145286|OPRM1|4988|opioid receptor, mu 1##L25119|OPRM1|4988|opioid receptor, mu 1##U12569|OPRM1|4988|opioid receptor, mu 1##AK313901|OPRM1|4988|opioid receptor, mu 1##AY225404|OPRM1|4988|opioid receptor, mu 1##AY364230|OPRM1|4988|opioid receptor, mu 1##AY036622|OPRM1|4988|opioid receptor, mu 1##AY036623|OPRM1|4988|opioid receptor, mu 1##AY309001|OPRM1|4988|opioid receptor, mu 1##AY309005|OPRM1|4988|opioid receptor, mu 1##AY309006|OPRM1|4988|opioid receptor, mu 1##AY309007|OPRM1|4988|opioid receptor, mu 1##AY309008|OPRM1|4988|opioid receptor, mu 1##AY309009|OPRM1|4988|opioid receptor, mu 1##BC074927|OPRM1|4988|opioid receptor, mu 1##AY521028|OPRM1|4988|opioid receptor, mu 1	0.418495	CTCF.p2:-7:0.418
chr12	124832578	124832748	reg1015054.p1	7.826	+	AK126577 NM_181709	-58954	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-374934	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-375464	-	TSC_hg19_v1_chr12_-_125002875 BC033087	170196	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	219412	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	515642	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	1.473986	CTCF.p2:19:0.999	CTCF.p2:-55:0.475
chr14	67752703	67752861	reg1017565.p2	7.826	+	BC095485 TSC_hg19_v1_chr14_+_67708117 NM_022474 AK291240 AK098373 BC053366 AL832326 BC129933 AL832578 BC037966 AK057160	-44619	+	NM_173526 AK093449 AX748134 AK302154 BC037380 BC050401	-96639	+	AJ272343 TSC_hg19_v1_chr14_+_66975224 AK294532 AK297447 BC030016 DQ892463 DQ895675 AB385462 AJ272033	-777557	+	CU692980 TSC_hg19_v1_chr14_-_67826522 BC001411 AF104629 BC031002 AK315784 AK001155 AF145316 AF077614 AF100741 BC025373 NM_015994	73784	-	TSC_hg19_v1_chr14_+_67827035 NM_004094	74251	+	TSC_hg19_v1_chr14_+_67827053 AK312442 BX161521 AK297244	74268	+	BC095485|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##NM_022474|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK291240|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK098373|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC053366|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832326|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC129933|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832578|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC037966|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##NM_173526|FAM71D|161142|family with sequence similarity 71, member D##AK093449|FAM71D|161142|family with sequence similarity 71, member D##AK302154|FAM71D|161142|family with sequence similarity 71, member D##BC037380|FAM71D|161142|family with sequence similarity 71, member D##BC050401|FAM71D|161142|family with sequence similarity 71, member D##AJ272343|GPHN|10243|gephyrin##AK294532|GPHN|10243|gephyrin##AK297447|GPHN|10243|gephyrin##BC030016|GPHN|10243|gephyrin##DQ892463|GPHN|10243|gephyrin##DQ895675|GPHN|10243|gephyrin##AJ272033|GPHN|10243|gephyrin##BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##NM_004094|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##AK312442|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##BX161521|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##AK297244|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	0.876477	CTCF.p2:-1:0.866
chr2	69170748	69170879	reg1021269.p1	7.826	+	BC069080 BC101734 BC105063 AF101441 NM_014482	-72238	-	BC032222 NM_001166276 NM_014882 AK311669 TSC_hg19_v1_chr2_+_69002068 BC039591 AK297157 AK298669 D29642	-168788	+	NM_001007231 NM_001166277 AK297056 TSC_hg19_v1_chr2_+_68962066 AK310742 AK290396	-208740	+	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	9243	-	AB039886 AJ966789 NM_019617 AB590637 AY139184 AK098489 AY456961 BC059778 AY359050	30929	+	TSC_hg19_v1_chr2_+_69240310 NM_018153 NM_032208 NM_053034 AF279145 AK001463 AY928974 AY928975 AY928976 AY928977 AK223273 BC012074 AK309553 AF421380 AK292113 CU680200 EU832615 EU832687	69570	+	BC069080|BMP10|27302|bone morphogenetic protein 10##BC101734|BMP10|27302|bone morphogenetic protein 10##BC105063|BMP10|27302|bone morphogenetic protein 10##AF101441|BMP10|27302|bone morphogenetic protein 10##NM_014482|BMP10|27302|bone morphogenetic protein 10##BC032222|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166276|ARHGAP25|9938|Rho GTPase activating protein 25##NM_014882|ARHGAP25|9938|Rho GTPase activating protein 25##AK311669|ARHGAP25|9938|Rho GTPase activating protein 25##BC039591|ARHGAP25|9938|Rho GTPase activating protein 25##AK297157|ARHGAP25|9938|Rho GTPase activating protein 25##AK298669|ARHGAP25|9938|Rho GTPase activating protein 25##D29642|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25##AK297056|ARHGAP25|9938|Rho GTPase activating protein 25##AK310742|ARHGAP25|9938|Rho GTPase activating protein 25##AK290396|ARHGAP25|9938|Rho GTPase activating protein 25##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2##AB039886|GKN1|56287|gastrokine 1##AJ966789|GKN1|56287|gastrokine 1##NM_019617|GKN1|56287|gastrokine 1##AY139184|GKN1|56287|gastrokine 1##AK098489|GKN1|56287|gastrokine 1##AY456961|GKN1|56287|gastrokine 1##BC059778|GKN1|56287|gastrokine 1##AY359050|GKN1|56287|gastrokine 1##NM_018153|ANTXR1|84168|anthrax toxin receptor 1##NM_032208|ANTXR1|84168|anthrax toxin receptor 1##NM_053034|ANTXR1|84168|anthrax toxin receptor 1##AF279145|ANTXR1|84168|anthrax toxin receptor 1##AK001463|ANTXR1|84168|anthrax toxin receptor 1##AK223273|ANTXR1|84168|anthrax toxin receptor 1##BC012074|ANTXR1|84168|anthrax toxin receptor 1##AK309553|ANTXR1|84168|anthrax toxin receptor 1##AF421380|ANTXR1|84168|anthrax toxin receptor 1##AK292113|ANTXR1|84168|anthrax toxin receptor 1##EU832615|ANTXR1|84168|anthrax toxin receptor 1##EU832687|ANTXR1|84168|anthrax toxin receptor 1	0.454555	CTCF.p2:-5:0.455
chr7	132915502	132915636	reg1019388.p1	7.826	+	TSC_hg19_v1_chr7_-_132766851 BC011596 BC014839 AK129533	-148723	-	AB528286 TSC_hg19_v1_chr7_-_132766813 AK294071 AK000427 NM_017812 AK310236	-148805	-	BC028744 NM_181775	-582123	-	TSC_hg19_v1_chr7_+_132937838 NM_001037126 NM_021807 AF380839 AK027688 AL831989 AK298191 BC067263 BC026174 CU693148 AB051486	22280	+	BC104897 BC104899 AK057348 NM_144648	896508	+	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	1086054	-	BC011596|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC014839|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK129533|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK294071|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK000427|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##NM_017812|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK310236|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC028744|PLXNA4|91584|plexin A4##NM_181775|PLXNA4|91584|plexin A4##NM_001037126|EXOC4|60412|exocyst complex component 4##NM_021807|EXOC4|60412|exocyst complex component 4##AF380839|EXOC4|60412|exocyst complex component 4##AK027688|EXOC4|60412|exocyst complex component 4##AL831989|EXOC4|60412|exocyst complex component 4##AK298191|EXOC4|60412|exocyst complex component 4##BC067263|EXOC4|60412|exocyst complex component 4##BC026174|EXOC4|60412|exocyst complex component 4##AB051486|EXOC4|60412|exocyst complex component 4##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4	0.964572	CTCF.p2:-16:0.965
chr9	33125109	33125214	reg1017227.p2	7.826	+	TSC_hg19_v1_chr9_-_33076673 NM_018225	-48469	-	CU678268 DQ893005 DQ896251 TSC_hg19_v1_chr9_-_33076667 AK001667 BC002876 EF011613 AK225587 AK304767 AK225559	-48524	-	BT007292 CU678881 DQ891091 EU176556 TSC_hg19_v1_chr9_+_33026519	-98661	+	TSC_hg19_v1_chr9_-_33167158 AK316294	41963	-	AB590749 X55415 TSC_hg19_v1_chr9_-_33167196 AK296928 AK312797	42025	-	D29805 X13223 X14085 M22921 U10474 TSC_hg19_v1_chr9_-_33167262	42086	-	NM_018225|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##DQ893005|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##DQ896251|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##AK001667|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##BC002876|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##EF011613|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##AK225587|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##AK304767|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##AK225559|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##BT007292|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##DQ891091|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##EU176556|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##AK316294|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X55415|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AK296928|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AK312797|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##D29805|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X13223|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X14085|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##M22921|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##U10474|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	0.05076	
chr20	33124948	33125065	reg1016487.p1	7.825	+	TSC_hg19_v1_chr20_+_33104226 NM_014183 AF132750 BC002481 AF161511 AK294214 AF165516	-20790	+	TSC_hg19_v1_chr20_+_32951078 NM_031483 AK297809 AK304090 AK315212 BC011571 AB056663	-173914	+	AK097610 NM_001161766	-225399	-	NM_181509	9685	+	TSC_hg19_v1_chr20_+_33146525 NM_032514 AF276658 BC015810 AL833855 AB528175 BT007452 DQ893641 DQ895536 AM392590	21580	+	AK301900 AY339061 BC030512 EU831773 EU831851 TSC_hg19_v1_chr20_-_33264897 AB086842 AK308627 AK075507 AY358816	139904	-	NM_014183|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF132750|DYNLRB1|83658|dynein, light chain, roadblock-type 1##BC002481|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF161511|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AK294214|DYNLRB1|83658|dynein, light chain, roadblock-type 1##AF165516|DYNLRB1|83658|dynein, light chain, roadblock-type 1##NM_031483|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK297809|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK304090|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK315212|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##BC011571|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AB056663|ITCH|83737|itchy E3 ubiquitin protein ligase homolog (mouse)##AK097610|AHCY|191|adenosylhomocysteinase##NM_001161766|AHCY|191|adenosylhomocysteinase##NM_181509|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##NM_032514|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AF276658|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##BC015810|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AL833855|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##BT007452|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##DQ893641|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##DQ895536|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AM392590|MAP1LC3A|84557|microtubule-associated protein 1 light chain 3 alpha##AK301900|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AY339061|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##BC030512|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##EU831773|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##EU831851|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AB086842|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AK308627|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AK075507|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AY358816|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U	0.423821	CTCF.p2:-18:0.424
chr5	110495700	110495830	reg1016757.p2	7.825	+	AF385437 NM_139281 BC133025 BC136517 AK095312 TSC_hg19_v1_chr5_+_110428045 AL832494	-67806	+	AY037115 NM_033035	-88376	+	TSC_hg19_v1_chr5_+_110074741 AK300123 BC017169 NM_138773 M74089 AK290217 AB529063	-420985	+	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	64184	+	AK054566 NM_139164 TSC_hg19_v1_chr5_-_110848234 AK290312 AK310848 BC019632 AK125317 AK308851 AK315863 AK315869	352437	-	BC042956 TSC_hg19_v1_chr5_-_110848300	352529	-	AF385437|WDR36|134430|WD repeat domain 36##NM_139281|WDR36|134430|WD repeat domain 36##BC133025|WDR36|134430|WD repeat domain 36##BC136517|WDR36|134430|WD repeat domain 36##AK095312|WDR36|134430|WD repeat domain 36##AL832494|WDR36|134430|WD repeat domain 36##AY037115|TSLP|85480|thymic stromal lymphopoietin##NM_033035|TSLP|85480|thymic stromal lymphopoietin##AK300123|SLC25A46|91137|solute carrier family 25, member 46##BC017169|SLC25A46|91137|solute carrier family 25, member 46##NM_138773|SLC25A46|91137|solute carrier family 25, member 46##M74089|SLC25A46|91137|solute carrier family 25, member 46##AK290217|SLC25A46|91137|solute carrier family 25, member 46##L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK054566|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_139164|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK290312|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK310848|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC019632|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK125317|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK308851|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315863|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315869|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC042956|STARD4|134429|StAR-related lipid transfer (START) domain containing 4	0.326868	CTCF.p2:-12:0.327
chr5	32709969	32710071	reg1017513.p1	7.825	+	NM_006713 TSC_hg19_v1_chr5_+_32585676 AK294124 AK311754 BC022339 AK307268 BC009610 BC018189 BC071655 BC063402 BC010537 BC105972 AB209285	-124364	+	TSC_hg19_v1_chr5_-_32444845 AK292214 AK309638 BC017879 NM_016107	-265084	-	TSC_hg19_v1_chr5_-_32444820 BC107417 AJ314790 BC030540 BC137084 BC137085	-265242	-	NM_001204376 AK300094 AK308301	730	+	AK290870 NM_000908 NM_001204375 M59305	1468	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	1785	+	NM_006713|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK294124|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK311754|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC022339|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK307268|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC009610|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC018189|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC071655|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC063402|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC010537|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC105972|SUB1|10923|SUB1 homolog (S. cerevisiae)##AB209285|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK292214|ZFR|51663|zinc finger RNA binding protein##AK309638|ZFR|51663|zinc finger RNA binding protein##BC017879|ZFR|51663|zinc finger RNA binding protein##NM_016107|ZFR|51663|zinc finger RNA binding protein##BC107417|ZFR|51663|zinc finger RNA binding protein##AJ314790|ZFR|51663|zinc finger RNA binding protein##BC030540|ZFR|51663|zinc finger RNA binding protein##BC137084|ZFR|51663|zinc finger RNA binding protein##BC137085|ZFR|51663|zinc finger RNA binding protein##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)	0.047502	
chr17	655528	655648	reg1017703.p1	7.824	+	TSC_hg19_v1_chr17_-_655502 NM_015721	-103	-	TSC_hg19_v1_chr17_-_655412 AB463052 AF173856 BC036024 AK302722 BC032084 BC020062	-168	-	TSC_hg19_v1_chr17_+_635806 AF477201 BC026023 AK025935 AK292065 NM_024792 CU693104 AK125146	-19802	+	TSC_hg19_v1_chr17_-_685521 AK226083 AK292315 BC008605 CU677471 AK296584 AF061730 AF177342 AK301751 BC010902 BC015848 AK001488 AF177343 NM_016080	29892	-	AF177344 NM_018146 TSC_hg19_v1_chr17_+_685592 AK001443 AK222900	29970	+	BC011550 TSC_hg19_v1_chr17_+_685611 BC050614 AK225128 AB590841 CU679954 CU690740	30026	+	NM_015721|GEMIN4|50628|gem (nuclear organelle) associated protein 4##AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4##AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4##AF477201|FAM57A|79850|family with sequence similarity 57, member A##BC026023|FAM57A|79850|family with sequence similarity 57, member A##AK025935|FAM57A|79850|family with sequence similarity 57, member A##AK292065|FAM57A|79850|family with sequence similarity 57, member A##NM_024792|FAM57A|79850|family with sequence similarity 57, member A##AK125146|FAM57A|79850|family with sequence similarity 57, member A##AK226083|GLOD4|51031|glyoxalase domain containing 4##AK292315|GLOD4|51031|glyoxalase domain containing 4##BC008605|GLOD4|51031|glyoxalase domain containing 4##AK296584|GLOD4|51031|glyoxalase domain containing 4##AF061730|GLOD4|51031|glyoxalase domain containing 4##AF177342|GLOD4|51031|glyoxalase domain containing 4##AK301751|GLOD4|51031|glyoxalase domain containing 4##BC010902|GLOD4|51031|glyoxalase domain containing 4##BC015848|GLOD4|51031|glyoxalase domain containing 4##AK001488|GLOD4|51031|glyoxalase domain containing 4##AF177343|GLOD4|51031|glyoxalase domain containing 4##NM_016080|GLOD4|51031|glyoxalase domain containing 4##AF177344|RNMTL1|55178|RNA methyltransferase like 1##NM_018146|RNMTL1|55178|RNA methyltransferase like 1##AK001443|RNMTL1|55178|RNA methyltransferase like 1##AK222900|RNMTL1|55178|RNA methyltransferase like 1##BC011550|RNMTL1|55178|RNA methyltransferase like 1##BC050614|RNMTL1|55178|RNA methyltransferase like 1##AK225128|RNMTL1|55178|RNA methyltransferase like 1	0.189817	
chr2	102868201	102868309	reg1017238.p1	7.824	+	AF284434 NM_003854 U49065 BC107064	-64807	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	-97835	+	TSC_hg19_v1_chr2_+_102759205 X16896	-109023	+	AB012701 NM_016232 AK313967 AK303389	59736	+	BC012580 BC030975 NM_003856 AK291578 AB029084	85476	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	110853	+	AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##X16896|IL1R1|3554|interleukin 1 receptor, type I##AB012701|IL1RL1|9173|interleukin 1 receptor-like 1##NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1##AK313967|IL18R1|8809|interleukin 18 receptor 1##AK303389|IL1RL1|9173|interleukin 1 receptor-like 1##BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1	0.490765	CTCF.p2:11:0.446
chr14	56174199	56174307	reg1017775.p2	7.823	+	L25616 TSC_hg19_v1_chr14_+_56078737 AB527439	-95504	+	TSC_hg19_v1_chr14_+_56046963 NM_001079521 NM_001079522 NM_004986 NM_182926 BC066337 D13629 AK302797 BC050555 BC058736 Z22551 AY264265 BC112337	-127151	+	BX248296 TSC_hg19_v1_chr14_-_56046835 AK124927	-127437	-	TSC_hg19_v1_chr14_+_56585131 BC009476 NM_021255 AK315727	410741	+	TSC_hg19_v1_chr14_+_56585163 AF302502	410921	+	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	872292	+	L25616|KTN1|3895|kinectin 1 (kinesin receptor)##NM_001079521|KTN1|3895|kinectin 1 (kinesin receptor)##NM_001079522|KTN1|3895|kinectin 1 (kinesin receptor)##NM_004986|KTN1|3895|kinectin 1 (kinesin receptor)##NM_182926|KTN1|3895|kinectin 1 (kinesin receptor)##BC066337|KTN1|3895|kinectin 1 (kinesin receptor)##D13629|KTN1|3895|kinectin 1 (kinesin receptor)##AK302797|KTN1|3895|kinectin 1 (kinesin receptor)##BC050555|KTN1|3895|kinectin 1 (kinesin receptor)##BC058736|KTN1|3895|kinectin 1 (kinesin receptor)##Z22551|KTN1|3895|kinectin 1 (kinesin receptor)##AY264265|KTN1|3895|kinectin 1 (kinesin receptor)##BC112337|KTN1|3895|kinectin 1 (kinesin receptor)##BX248296|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##AK124927|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##BC009476|PELI2|57161|pellino homolog 2 (Drosophila)##NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)##AK315727|PELI2|57161|pellino homolog 2 (Drosophila)##AF302502|PELI2|57161|pellino homolog 2 (Drosophila)##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101	0.697085	CTCF.p2:-9:0.697
chr5	149155506	149155609	reg1017064.p1	7.823	+	AK123614 NM_001172699	-4055	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	-45681	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	-45730	+	BC144044 BC035909 AB593141 M26061 NM_000440	168761	-	TSC_hg19_v1_chr5_+_149340320 NM_000112	184751	+	TSC_hg19_v1_chr5_+_149340352 AK312596	184794	+	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144044|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##BC035909|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##AB593141|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##M26061|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000440|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2	0.997691	CTCF.p2:0:0.998
chr6	56709070	56709202	reg1015745.p2	7.823	+	TSC_hg19_v1_chr6_-_56708446 U31850	-664	-	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	-201497	-	BC038763 TSC_hg19_v1_chr6_-_56407722	-301428	-	AK294830 TSC_hg19_v1_chr6_-_56716493	7316	-	AK299898 TSC_hg19_v1_chr6_-_56716715	7578	-	TSC_hg19_v1_chr6_+_56819725 NM_152731	110603	+	U31850|DST|667|dystonin##AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin##AK294830|DST|667|dystonin##AK299898|DST|667|dystonin##NM_152731|BEND6|221336|BEN domain containing 6	0.029945	
chr11	76838395	76838576	reg1005932.p2	7.821	+	CU686775 BC069115 BC069365 NM_006189	-24601	+	TSC_hg19_v1_chr11_+_76778017 BC018123 NM_004055 AK128124 AK313132 AK310978 AK094150 AB209087	-60458	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	-93026	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	843	+	TSC_hg19_v1_chr11_+_76883833 BC023212	45363	+	AY313782 AY326450 NM_182833	159977	-	BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein##BC018123|CAPN5|726|calpain 5##NM_004055|CAPN5|726|calpain 5##AK128124|CAPN5|726|calpain 5##AK313132|CAPN5|726|calpain 5##AK310978|CAPN5|726|calpain 5##AK094150|CAPN5|726|calpain 5##AB209087|CAPN5|726|calpain 5##NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA##BC023212|MYO7A|4647|myosin VIIA##AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4	0.0	
chr2	26311082	26311182	reg1016456.p2	7.821	+	AF086917 AF106681 BC000896 AB529109 AF297660 AF498945 CR457303 EU831649 EU831733 TSC_hg19_v1_chr2_+_26257540 AF091032	-53665	+	NM_016131 TSC_hg19_v1_chr2_+_26256952 AL136650 AK023223	-54278	+	TSC_hg19_v1_chr2_-_26205437 NM_002254	-105692	-	AB124552 NM_001168241	84827	+	AK090454 NM_001191033	92452	+	CU679263 DQ892776 DQ896023 FJ626228 TSC_hg19_v1_chr2_-_26467495 AK302532 AK293398 AK299258 AK313027 D16480 BC009235 GU727642 U04627	156349	-	AF086917|RAB10|10890|RAB10, member RAS oncogene family##AF106681|RAB10|10890|RAB10, member RAS oncogene family##BC000896|RAB10|10890|RAB10, member RAS oncogene family##AF297660|RAB10|10890|RAB10, member RAS oncogene family##AF498945|RAB10|10890|RAB10, member RAS oncogene family##CR457303|RAB10|10890|RAB10, member RAS oncogene family##EU831649|RAB10|10890|RAB10, member RAS oncogene family##EU831733|RAB10|10890|RAB10, member RAS oncogene family##AF091032|RAB10|10890|RAB10, member RAS oncogene family##NM_016131|RAB10|10890|RAB10, member RAS oncogene family##AL136650|RAB10|10890|RAB10, member RAS oncogene family##AK023223|RAB10|10890|RAB10, member RAS oncogene family##NM_002254|KIF3C|3797|kinesin family member 3C##AB124552|FAM59B|150946|family with sequence similarity 59, member B##NM_001168241|FAM59B|150946|family with sequence similarity 59, member B##AK090454|FAM59B|150946|family with sequence similarity 59, member B##NM_001191033|FAM59B|150946|family with sequence similarity 59, member B##DQ892776|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##DQ896023|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##FJ626228|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK302532|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK293398|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK299258|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK313027|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##D16480|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##BC009235|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##GU727642|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##U04627|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit	0.231486	CTCF.p2:-11:0.231
chr4	108679179	108679293	reg1016309.p2	7.821	+	BC011392 AF016496 CR457028 CU690750 BC040940 TSC_hg19_v1_chr4_-_108641372 BC050627 AF033026 AK292774 AK297981 Y10387 BC032513 AF105227 NM_005443	-37872	-	NM_014421 AF177395	-721784	-	NM_001195138	-1390645	-	AK290344 NM_001136258 AF452717	66531	+	NM_001136257 NM_152621 BC028705 AK314049 BC041369	135188	+	TSC_hg19_v1_chr4_+_108852714 AK304724 AK290002 NM_183075 BC012027 BC132767 BC136483 BC144148 AY343323 AK303284 HQ258621	173497	+	BC011392|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF016496|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##CR457028|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC040940|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC050627|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF033026|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK292774|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK297981|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##Y10387|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC032513|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF105227|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##NM_005443|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##NM_014421|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##AF177395|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like##AK290344|SGMS2|166929|sphingomyelin synthase 2##NM_001136258|SGMS2|166929|sphingomyelin synthase 2##AF452717|SGMS2|166929|sphingomyelin synthase 2##NM_001136257|SGMS2|166929|sphingomyelin synthase 2##NM_152621|SGMS2|166929|sphingomyelin synthase 2##BC028705|SGMS2|166929|sphingomyelin synthase 2##AK314049|SGMS2|166929|sphingomyelin synthase 2##BC041369|SGMS2|166929|sphingomyelin synthase 2##AK304724|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##AK290002|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##NM_183075|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##BC012027|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##BC132767|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##BC136483|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##BC144148|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##AY343323|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##AK303284|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1##HQ258621|CYP2U1|113612|cytochrome P450, family 2, subfamily U, polypeptide 1	0.979996	CTCF.p2:0:0.980
chr7	50182081	50182217	reg1016727.p1	7.821	+	NM_001161834	-46468	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	-49325	-	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-368879	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	162204	+	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	166170	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	335905	-	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1	0.0	
chr11	134462419	134462562	reg1017945.p1	7.820	+	AB029396 BC010466 NM_018644 NM_054025 TSC_hg19_v1_chr11_-_134281917	-180669	-	AK074855 AK074855 TSC_hg19_v1_chr11_+_134201905 AK074947 AK074947	-260570	+	NM_138342 BC040641 BC040641 AK074703 AK074703 TSC_hg19_v1_chr11_+_134201886 AY358497 AY358497	-260662	+	None	None	None	None	None	None	None	None	None	AB029396|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##BC010466|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##NM_018644|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##NM_054025|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##AK074855|GLB1L2|89944|galactosidase, beta 1-like 2##AK074855|GLB1L2|89944|galactosidase, beta 1-like 2##AK074947|GLB1L2|89944|galactosidase, beta 1-like 2##AK074947|GLB1L2|89944|galactosidase, beta 1-like 2##NM_138342|GLB1L2|89944|galactosidase, beta 1-like 2##BC040641|GLB1L2|89944|galactosidase, beta 1-like 2##BC040641|GLB1L2|89944|galactosidase, beta 1-like 2##AK074703|GLB1L2|89944|galactosidase, beta 1-like 2##AK074703|GLB1L2|89944|galactosidase, beta 1-like 2##AY358497|GLB1L2|89944|galactosidase, beta 1-like 2##AY358497|GLB1L2|89944|galactosidase, beta 1-like 2	0.998308	CTCF.p2:-14:0.998
chr2	239892307	239892422	reg1019230.p1	7.820	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	-135601	+	TSC_hg19_v1_chr2_+_239335693 AF156777	-556675	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	-556758	+	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	430284	-	TSC_hg19_v1_chr2_-_240322695 BC039904	430334	-	TSC_hg19_v1_chr2_-_240323341 AK308791	430984	-	BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)##AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AK308791|HDAC4|9759|histone deacetylase 4	0.999495	CTCF.p2:-3:0.999
chr3	148665185	148665321	reg1020220.p1	7.820	+	NM_001870 AK313628 BC012613 DQ892805 DQ896052 CU680374 M27717	-82185	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	-119655	+	NM_032049	-217287	+	TSC_hg19_v1_chr3_+_148709140 NM_001184720 NM_001184721 NM_004130	43914	+	TSC_hg19_v1_chr3_+_148709326 AK299962 BC000033 X79537 AK312283 AF087942 U44131	44082	+	AB209052 EU446704 TSC_hg19_v1_chr3_-_148804298 AK291231 L34673 BC015498 BC005260 BC044659 BC014326 BC030976 NM_003071 NM_139048	139009	-	NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)##AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)##BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)##DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)##DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)##M27717|CPA3|1359|carboxypeptidase A3 (mast cell)##NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_001184720|GYG1|2992|glycogenin 1##NM_001184721|GYG1|2992|glycogenin 1##NM_004130|GYG1|2992|glycogenin 1##AK299962|GYG1|2992|glycogenin 1##BC000033|GYG1|2992|glycogenin 1##X79537|GYG1|2992|glycogenin 1##AK312283|GYG1|2992|glycogenin 1##AF087942|GYG1|2992|glycogenin 1##U44131|GYG1|2992|glycogenin 1##AB209052|HLTF|6596|helicase-like transcription factor##EU446704|HLTF|6596|helicase-like transcription factor##AK291231|HLTF|6596|helicase-like transcription factor##L34673|HLTF|6596|helicase-like transcription factor##BC015498|HLTF|6596|helicase-like transcription factor##BC005260|HLTF|6596|helicase-like transcription factor##BC044659|HLTF|6596|helicase-like transcription factor##BC014326|HLTF|6596|helicase-like transcription factor##BC030976|HLTF|6596|helicase-like transcription factor##NM_003071|HLTF|6596|helicase-like transcription factor##NM_139048|HLTF|6596|helicase-like transcription factor	0.843677	CTCF.p2:-4:0.844
chr4	122821676	122821787	reg1016554.p1	7.820	+	AB528453 CU689486 DQ890888 DQ896810 BC032691 AF521643 AF521644 AK001577 AK309803 AK308076 NM_018190 NM_176824	-30172	-	TSC_hg19_v1_chr4_-_122745039 BC021067 AK291931 NM_001237	-76690	-	CR407692 TSC_hg19_v1_chr4_-_122744913 BC104783 BC104787 X51688	-76880	-	AB255423 AB255424 BC093682 BC093684 BC143239 NM_003305	32498	-	AY865574 NM_001130698	51177	-	DQ335469 NM_015312	270026	+	DQ890888|BBS7|55212|Bardet-Biedl syndrome 7##DQ896810|BBS7|55212|Bardet-Biedl syndrome 7##BC032691|BBS7|55212|Bardet-Biedl syndrome 7##AF521643|BBS7|55212|Bardet-Biedl syndrome 7##AF521644|BBS7|55212|Bardet-Biedl syndrome 7##AK001577|BBS7|55212|Bardet-Biedl syndrome 7##AK309803|BBS7|55212|Bardet-Biedl syndrome 7##AK308076|BBS7|55212|Bardet-Biedl syndrome 7##NM_018190|BBS7|55212|Bardet-Biedl syndrome 7##NM_176824|BBS7|55212|Bardet-Biedl syndrome 7##AK291931|CCNA2|890|cyclin A2##NM_001237|CCNA2|890|cyclin A2##CR407692|CCNA2|890|cyclin A2##BC104783|CCNA2|890|cyclin A2##BC104787|CCNA2|890|cyclin A2##X51688|CCNA2|890|cyclin A2##AB255423|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##AB255424|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##BC093682|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##BC093684|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##BC143239|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##NM_003305|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##AY865574|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##NM_001130698|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##DQ335469|KIAA1109|84162|KIAA1109##NM_015312|KIAA1109|84162|KIAA1109	0.531756	CTCF.p2:0:0.532
chrX	31442164	31442283	reg1019103.p1	7.820	+	CU688550 M92650 TSC_hg19_v1_chrX_-_31285072 BC070078 NM_004015 NM_004016 NM_004017 NM_004018 NM_004019 S42206 BC094758 AK299936 BC028720 S38776	-157189	-	BC069538 BC100768 BC100769 BC100770 BC069069 AF285592 NM_031894	-352060	-	TSC_hg19_v1_chrX_-_30907408 AK297274 NM_152787	-534764	-	NM_004014 S62617	84191	-	L35854 NM_004013 NM_004020 NM_004021 NM_004022 NM_004023	731362	-	NM_004011 NM_004012	988147	-	M92650|DMD|1756|dystrophin##BC070078|DMD|1756|dystrophin##NM_004015|DMD|1756|dystrophin##NM_004016|DMD|1756|dystrophin##NM_004017|DMD|1756|dystrophin##NM_004018|DMD|1756|dystrophin##NM_004019|DMD|1756|dystrophin##S42206|DMD|1756|dystrophin##BC094758|DMD|1756|dystrophin##AK299936|DMD|1756|dystrophin##BC028720|DMD|1756|dystrophin##S38776|DMD|1756|dystrophin##BC069538|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100768|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100769|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100770|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC069069|FTHL17|53940|ferritin, heavy polypeptide-like 17##AF285592|FTHL17|53940|ferritin, heavy polypeptide-like 17##NM_031894|FTHL17|53940|ferritin, heavy polypeptide-like 17##AK297274|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##NM_152787|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin##L35854|DMD|1756|dystrophin##NM_004013|DMD|1756|dystrophin##NM_004020|DMD|1756|dystrophin##NM_004021|DMD|1756|dystrophin##NM_004022|DMD|1756|dystrophin##NM_004023|DMD|1756|dystrophin##NM_004011|DMD|1756|dystrophin##NM_004012|DMD|1756|dystrophin	0.302564	CTCF.p2:-14:0.303
chr1	156355320	156355500	reg1000197.p1	7.818	+	AF193807 AK290840 AK294641 AK303799 AK303814 AY139092 AY139093 NM_020407 AK308556 TSC_hg19_v1_chr1_+_156339022 AK054780 BC065218	-16389	+	TSC_hg19_v1_chr1_-_156308103 NM_001008800 NM_005998	-47258	-	TSC_hg19_v1_chr1_-_156308084 AL833197 AB208882 AK308023	-47334	-	NM_006365 U49857 BC059943 BC107686 BC050448 TSC_hg19_v1_chr1_-_156399219 AK095626 BC054045	43866	-	BC040949 TSC_hg19_v1_chr1_-_156460409	104993	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	115108	-	AF193807|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK290840|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK294641|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303799|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303814|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139092|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139093|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_020407|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK308556|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK054780|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##BC065218|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_001008800|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_005998|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AL833197|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AB208882|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK308023|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_006365|C1orf61|10485|chromosome 1 open reading frame 61##U49857|C1orf61|10485|chromosome 1 open reading frame 61##BC059943|C1orf61|10485|chromosome 1 open reading frame 61##BC107686|C1orf61|10485|chromosome 1 open reading frame 61##BC050448|C1orf61|10485|chromosome 1 open reading frame 61##AK095626|C1orf61|10485|chromosome 1 open reading frame 61##BC054045|C1orf61|10485|chromosome 1 open reading frame 61##BC040949|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D	0.0	
chr11	94519829	94519936	reg1016123.p1	7.818	+	TSC_hg19_v1_chr11_+_94501528 BX648729 NM_130847 AK093699 AX748266 AF453742 BC037539 AK074084 AM393663	-18293	+	NM_152431 AB079366 AK093475 AX748151 BC031060 DQ891240 DQ894425 AB590313 CU689100	-219304	+	TSC_hg19_v1_chr11_+_94277605 M58596	-242283	+	TSC_hg19_v1_chr11_-_94706721 AK309042 AF110775 AF161497 AK225956 AK314900 BC032629 AJ250393 BC040946 BC006975	186840	-	TSC_hg19_v1_chr11_-_94706742 NM_016403	186875	-	TSC_hg19_v1_chr11_+_94706841 BC031862 NM_018039	186953	+	BX648729|AMOTL1|154810|angiomotin like 1##NM_130847|AMOTL1|154810|angiomotin like 1##AK093699|AMOTL1|154810|angiomotin like 1##AF453742|AMOTL1|154810|angiomotin like 1##BC037539|AMOTL1|154810|angiomotin like 1##AK074084|AMOTL1|154810|angiomotin like 1##AM393663|AMOTL1|154810|angiomotin like 1##NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)##AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)##AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)##BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##AK309042|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AF110775|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AF161497|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AK225956|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AK314900|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC032629|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AJ250393|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC040946|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC006975|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##NM_016403|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC031862|KDM4D|55693|lysine (K)-specific demethylase 4D##NM_018039|KDM4D|55693|lysine (K)-specific demethylase 4D	0.0	
chr12	95467405	95467548	reg1018614.p1	7.818	+	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	-178	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	-69960	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	-70006	-	TSC_hg19_v1_chr12_-_95611206 BC125225 BC125226 BX538322 AK124904 NM_018351	143760	-	TSC_hg19_v1_chr12_+_95611582 NM_017599 AK001338 AK225303 AK309943 AK225356 BC014443 AK307864 AL137497 BC064939 BC028597	144218	+	TSC_hg19_v1_chr12_+_95676175 AL133113	208742	+	M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein##AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein##AL133113|VEZT|55591|vezatin, adherens junctions transmembrane protein	0.729305	CTCF.p2:10:0.729
chr15	63891889	63892001	reg1017046.p1	7.818	+	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	-2366	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	-95068	+	TSC_hg19_v1_chr15_+_63796791 AK314223	-95163	+	BC017581 BC036918 AK093077 TSC_hg19_v1_chr15_-_63893135	1097	-	TSC_hg19_v1_chr15_-_64126081 U50078	234139	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	234175	-	NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##AK314223|USP3|9960|ubiquitin specific peptidase 3##BC017581|LOC100130855|100130855|uncharacterized LOC100130855##BC036918|LOC100130855|100130855|uncharacterized LOC100130855##AK093077|LOC100130855|100130855|uncharacterized LOC100130855##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	0.139796	
chr4	127525570	127525696	reg1017178.p1	7.818	+	NM_024582	-1288067	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	-1891819	-	AK026960 BC063856 NM_005841	-3204960	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	1028506	+	TSC_hg19_v1_chr4_+_128651573 NM_031291 AL136857 AY550240 BC022032 AB528294 AM393262 CU692468 AJ863129	1125976	+	TSC_hg19_v1_chr4_+_128703445 BC040560 NM_014278	1177800	+	NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##NM_031291|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AL136857|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AY550240|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC022032|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AM393262|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AJ863129|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC040560|HSPA4L|22824|heat shock 70kDa protein 4-like##NM_014278|HSPA4L|22824|heat shock 70kDa protein 4-like	0.998384	CTCF.p2:-8:0.998
chr6	6316008	6316141	reg1016942.p1	7.818	+	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-308377	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	-308933	-	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-1054384	+	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	4811	-	TSC_hg19_v1_chr6_-_6320897 NM_000129	4836	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	272876	+	BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86	0.019894	
chr6	95879628	95879736	reg1015913.p1	7.818	+	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	-1750499	-	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-4582844	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-4582999	-	TSC_hg19_v1_chr6_-_96025325 BC047582	145607	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	145719	+	NM_006581 AK314966 TSC_hg19_v1_chr6_+_96463867 BC001879 BC036101 AB023021	584185	+	BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha##NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	0.035425	
chr15	75591675	75591811	reg1005519.p2	7.817	+	AF263742 NM_001145224	-16565	+	AF263742 NM_001164404	-40845	+	TSC_hg19_v1_chr15_+_75494242 AF495726 BC011379 AK125604	-97500	+	NM_017828 AK225716 BC033744 AK000459 AK293708 AK057145 AK124968 AK314740 BC069195 BC068998 AL136872	36651	+	NM_024608 AK026055	47626	+	AB209141 TSC_hg19_v1_chr15_-_75660874	69118	-	AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001145224|GOLGA6D|653643|golgin A6 family, member D##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001164404|GOLGA6C|653641|golgin A6 family, member C##AF495726|C15orf39|56905|chromosome 15 open reading frame 39##BC011379|C15orf39|56905|chromosome 15 open reading frame 39##AK125604|C15orf39|56905|chromosome 15 open reading frame 39##NM_017828|COMMD4|54939|COMM domain containing 4##AK225716|COMMD4|54939|COMM domain containing 4##BC033744|COMMD4|54939|COMM domain containing 4##AK000459|COMMD4|54939|COMM domain containing 4##AK293708|COMMD4|54939|COMM domain containing 4##AK057145|COMMD4|54939|COMM domain containing 4##AK314740|COMMD4|54939|COMM domain containing 4##BC069195|COMMD4|54939|COMM domain containing 4##BC068998|COMMD4|54939|COMM domain containing 4##AL136872|COMMD4|54939|COMM domain containing 4##NM_024608|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)##AK026055|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)##AB209141|MAN2C1|4123|mannosidase, alpha, class 2C, member 1	0.999101	CTCF.p2:16:0.999
chr18	30499931	30500041	reg1017992.p1	7.817	+	BC021267 AB037805 NM_020805	-147079	-	AL834491 BC121067 BC121068 AK025263 NM_001242409 NM_022751	-449566	-	TSC_hg19_v1_chr18_-_29993196 D28353	-506791	-	BC130535 BC144178 BC144179 NM_001105528	520026	-	BC062719 BC091517 AK126038 NM_198995	520673	-	BX648108 TSC_hg19_v1_chr18_-_31158297	658243	-	BC021267|KLHL14|57565|kelch-like 14 (Drosophila)##AB037805|KLHL14|57565|kelch-like 14 (Drosophila)##NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)##AL834491|FAM59A|64762|family with sequence similarity 59, member A##BC121067|FAM59A|64762|family with sequence similarity 59, member A##BC121068|FAM59A|64762|family with sequence similarity 59, member A##AK025263|FAM59A|64762|family with sequence similarity 59, member A##NM_001242409|FAM59A|64762|family with sequence similarity 59, member A##NM_022751|FAM59A|64762|family with sequence similarity 59, member A##BC130535|C18orf34|374864|chromosome 18 open reading frame 34##BC144178|C18orf34|374864|chromosome 18 open reading frame 34##BC144179|C18orf34|374864|chromosome 18 open reading frame 34##NM_001105528|C18orf34|374864|chromosome 18 open reading frame 34##BC062719|C18orf34|374864|chromosome 18 open reading frame 34##BC091517|C18orf34|374864|chromosome 18 open reading frame 34##AK126038|C18orf34|374864|chromosome 18 open reading frame 34##NM_198995|C18orf34|374864|chromosome 18 open reading frame 34	0.011271	
chr2	215452317	215452429	reg1013405.p2	7.817	+	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	-175913	+	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	-1303216	+	AK124960 NM_001242575	-1303445	-	AB590656 JF790283 JF790285 JF790287 TSC_hg19_v1_chr2_-_215674408 BC126426 BC126428 AX794378 JF790280 JF790281 JF790282 JF790284 U76638 AK314260 AK301843 JF790286 AK223409 NM_000465	221986	-	AY033486 NM_015657	444436	-	BC144073 AY219711 NM_173076	550736	-	BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451##JF790283|BARD1|580|BRCA1 associated RING domain 1##JF790285|BARD1|580|BRCA1 associated RING domain 1##JF790287|BARD1|580|BRCA1 associated RING domain 1##BC126426|BARD1|580|BRCA1 associated RING domain 1##BC126428|BARD1|580|BRCA1 associated RING domain 1##AX794378|BARD1|580|BRCA1 associated RING domain 1##JF790280|BARD1|580|BRCA1 associated RING domain 1##JF790281|BARD1|580|BRCA1 associated RING domain 1##JF790282|BARD1|580|BRCA1 associated RING domain 1##JF790284|BARD1|580|BRCA1 associated RING domain 1##U76638|BARD1|580|BRCA1 associated RING domain 1##AK314260|BARD1|580|BRCA1 associated RING domain 1##AK301843|BARD1|580|BRCA1 associated RING domain 1##JF790286|BARD1|580|BRCA1 associated RING domain 1##AK223409|BARD1|580|BRCA1 associated RING domain 1##NM_000465|BARD1|580|BRCA1 associated RING domain 1##AY033486|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_015657|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##BC144073|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##AY219711|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_173076|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12	0.033183	
chr3	192633193	192633316	reg1017063.p2	7.817	+	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	-187889	-	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-506411	-	AY858112 NM_001083308	-1454303	+	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	2382	-	BC036194 BC045582 NM_178496	2687	-	TSC_hg19_v1_chr3_+_192958897 BC048095 NM_020386	325650	+	AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2##BC048095|HRASLS|57110|HRAS-like suppressor##NM_020386|HRASLS|57110|HRAS-like suppressor	0.524177	CTCF.p2:92:0.450
chr12	57030554	57030667	reg1017588.p1	7.816	+	TSC_hg19_v1_chr12_-_57030136 AK303327 CR749379 NM_013449	-484	-	AK023842 TSC_hg19_v1_chr12_-_57024088	-6568	-	AK023830 TSC_hg19_v1_chr12_-_57009380	-21234	-	TSC_hg19_v1_chr12_-_57039769 CU677643 DQ891585 DQ894779 BC010111 AB489161 BC016512 AK291085	9145	-	TSC_hg19_v1_chr12_-_57039785 NM_001686	9216	-	AK098214 TSC_hg19_v1_chr12_-_57081913 BC003005	51240	-	AK303327|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##CR749379|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##NM_013449|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023842|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023830|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##DQ891585|ATP5B|506|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide##DQ894779|ATP5B|506|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide##BC016512|ATP5B|506|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide##AK291085|ATP5B|506|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide##NM_001686|ATP5B|506|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide##AK098214|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##BC003005|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)	0.750148	CTCF.p2:17:0.750
chr2	36873532	36873633	reg1014508.p1	7.816	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	-48300	-	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	-290180	+	TSC_hg19_v1_chr2_+_36582920 AY358371	-290620	+	NM_001177969 NM_001177970 NM_001177971 NM_001177972 NM_053276 AK299426 TSC_hg19_v1_chr2_+_36923849	50264	+	TSC_hg19_v1_chr2_+_36923944 BC061519 AK056772 AK292149 AY358338 AL832679 AF063833 BC128260	50378	+	TSC_hg19_v1_chr2_-_37076016 BC015406	202448	-	AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_001177969|VIT|5212|vitrin##NM_001177970|VIT|5212|vitrin##NM_001177971|VIT|5212|vitrin##NM_001177972|VIT|5212|vitrin##NM_053276|VIT|5212|vitrin##AK299426|VIT|5212|vitrin##BC061519|VIT|5212|vitrin##AK056772|VIT|5212|vitrin##AK292149|VIT|5212|vitrin##AY358338|VIT|5212|vitrin##AL832679|VIT|5212|vitrin##AF063833|VIT|5212|vitrin##BC128260|VIT|5212|vitrin##BC015406|STRN|6801|striatin, calmodulin binding protein	0.012436	
chr8	39853339	39853424	reg1013205.p1	7.816	+	AK128691 NM_194294	-60908	+	NM_002164 AK313259 BC027882 X17668 AY221100 CU693308 JF772862	-81997	+	X99374 CU687896 CU689996 DQ891615 DQ894807 AJ133005 U52370 BC034957 BC064547 AK301734 U38805 NM_001464	-157641	-	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	157637	+	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	901956	-	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	1313649	-	AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1##AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1##X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1##AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1##JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1##X99374|ADAM2|2515|ADAM metallopeptidase domain 2##DQ891615|ADAM2|2515|ADAM metallopeptidase domain 2##DQ894807|ADAM2|2515|ADAM metallopeptidase domain 2##AJ133005|ADAM2|2515|ADAM metallopeptidase domain 2##U52370|ADAM2|2515|ADAM metallopeptidase domain 2##BC034957|ADAM2|2515|ADAM metallopeptidase domain 2##BC064547|ADAM2|2515|ADAM metallopeptidase domain 2##AK301734|ADAM2|2515|ADAM metallopeptidase domain 2##U38805|ADAM2|2515|ADAM metallopeptidase domain 2##NM_001464|ADAM2|2515|ADAM metallopeptidase domain 2##BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1	0.694154	CTCF.p2:-6:0.694
chr6	101674864	101674980	reg1018700.p1	7.815	+	TSC_hg19_v1_chr6_-_101329241 BC026066 AK299117	-345679	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	-345706	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	-345822	-	HM149340 TSC_hg19_v1_chr6_+_101841583	166584	+	BC037954 TSC_hg19_v1_chr6_+_101846686	171755	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	171983	+	BC026066|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK299117|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	0.614262	CTCF.p2:23:0.544
chr6	12290565	12290746	reg1001216.p5	7.815	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	-62	+	NM_002114	-277932	+	NM_001143948 NM_032744	-511376	-	TSC_hg19_v1_chr6_+_12514301 D28417	223647	+	AK295263 TSC_hg19_v1_chr6_+_12716998	426288	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	426388	+	NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1	0.031229	
chr4	37454668	37454804	reg1017481.p1	7.813	+	NM_001144990	-208047	+	BC157885 NM_001170700	-1169093	+	AK131492 NM_001136536 AK304357 AK316523	-1171490	+	NM_001104629 BC037906	839	+	AK001879 NM_018302 AK225192	131133	+	TSC_hg19_v1_chr4_-_37687999 BC039540 AK075468 NM_001085399 NM_001085400	233237	-	NM_001144990|KIAA1239|57495|KIAA1239##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19##BC039540|RELL1|768211|RELT-like 1##AK075468|RELL1|768211|RELT-like 1##NM_001085399|RELL1|768211|RELT-like 1##NM_001085400|RELL1|768211|RELT-like 1	0.0	
chr9	135144243	135144355	reg1018002.p1	7.813	+	AB058760 NM_032536 TSC_hg19_v1_chr9_+_135037469	-106896	+	TSC_hg19_v1_chr9_+_135037083 AY358165	-107208	+	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	-189049	-	TSC_hg19_v1_chr9_-_135230312 AK125448	85931	-	TSC_hg19_v1_chr9_-_135230352 AK307608 BX537849	86049	-	TSC_hg19_v1_chr9_-_135230374 BX538166 NM_015046	86108	-	AB058760|NTNG2|84628|netrin G2##NM_032536|NTNG2|84628|netrin G2##AY358165|NTNG2|84628|netrin G2##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AK125448|SETX|23064|senataxin##AK307608|SETX|23064|senataxin##BX537849|SETX|23064|senataxin##BX538166|SETX|23064|senataxin##NM_015046|SETX|23064|senataxin	0.997231	CTCF.p2:9:0.997
chr14	42693622	42693763	reg1019992.p1	7.812	+	NM_152447 AK096627	-616925	+	BC053537 BC068566 BC030611 NM_203301	-2792031	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-2792335	-	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	2282783	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	2672806	+	BC121009 BC121010 TSC_hg19_v1_chr14_-_45431102	2737404	-	NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28##BC121009|KLHL28|54813|kelch-like 28 (Drosophila)##BC121010|KLHL28|54813|kelch-like 28 (Drosophila)	0.989197	CTCF.p2:-5:0.989
chr2	61032672	61032793	reg1016318.p1	7.812	+	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	-49248	+	AF080216 TSC_hg19_v1_chr2_-_60780784	-251954	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	-252210	-	TSC_hg19_v1_chr2_+_61108702 AK303926	75973	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	76005	+	TSC_hg19_v1_chr2_+_61108776 BC143885 BC117191 X75042	76055	+	NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC143885|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC117191|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##X75042|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)	0.952041	CTCF.p2:-35:0.952
chr17	49230644	49230716	reg1014751.p1	7.811	+	TSC_hg19_v1_chr17_-_49198227 AF327452 BC106048 AK302789 AY850123 AB011088 BC146755 BC153878 AK091921 AX747254 NM_001130527 NM_001130528 NM_003971	-32525	-	TSC_hg19_v1_chr17_-_49124138 BC007524 BC059946 AK299553 AK307793 AK295098 AK309214 AK024068 NM_001251971	-106452	-	AK313904 NM_001243877	-285342	-	NM_001018136 TSC_hg19_v1_chr17_+_49230927 AK291105 NM_000269 NM_198175	231	+	TSC_hg19_v1_chr17_+_49230932 AL360191 AF487339	252	+	TSC_hg19_v1_chr17_+_49230947 AK309160 AK313448 X17620 X73066 AL360166	263	+	AF327452|SPAG9|9043|sperm associated antigen 9##AK302789|SPAG9|9043|sperm associated antigen 9##AY850123|SPAG9|9043|sperm associated antigen 9##AB011088|SPAG9|9043|sperm associated antigen 9##BC146755|SPAG9|9043|sperm associated antigen 9##BC153878|SPAG9|9043|sperm associated antigen 9##AK091921|SPAG9|9043|sperm associated antigen 9##NM_001130527|SPAG9|9043|sperm associated antigen 9##NM_001130528|SPAG9|9043|sperm associated antigen 9##NM_003971|SPAG9|9043|sperm associated antigen 9##BC007524|SPAG9|9043|sperm associated antigen 9##BC059946|SPAG9|9043|sperm associated antigen 9##AK299553|SPAG9|9043|sperm associated antigen 9##AK307793|SPAG9|9043|sperm associated antigen 9##AK295098|SPAG9|9043|sperm associated antigen 9##AK309214|SPAG9|9043|sperm associated antigen 9##AK024068|SPAG9|9043|sperm associated antigen 9##NM_001251971|SPAG9|9043|sperm associated antigen 9##AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1##NM_001018136|NME1-NME2|654364|NME1-NME2 readthrough##AK291105|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_000269|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_198175|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##AL360191|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##AF487339|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##AK309160|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##AK313448|NME1-NME2|654364|NME1-NME2 readthrough##X17620|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##X73066|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##AL360166|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in	0.024731	
chr22	24917845	24917960	reg1016356.p2	7.811	+	AK314727 CR627429 CR456375 NM_016327 BC131703 TSC_hg19_v1_chr22_+_24891299 AF163312 AB013885 BC033388 AB528843 BC139840 BC139843 CU013080 CU013368	-26661	+	NM_000675 AK123058 EU036693 AK301420 BC013780	-94337	+	TSC_hg19_v1_chr22_+_24819870 EU036694	-98022	+	CU687038 TSC_hg19_v1_chr22_-_24951093 BC053529 AK296893	33143	-	TSC_hg19_v1_chr22_-_24951145 AK054681 AK294972	33241	-	TSC_hg19_v1_chr22_-_24951160 BC070109 NM_031444	33312	-	AK314727|UPB1|51733|ureidopropionase, beta##CR627429|UPB1|51733|ureidopropionase, beta##CR456375|UPB1|51733|ureidopropionase, beta##NM_016327|UPB1|51733|ureidopropionase, beta##BC131703|UPB1|51733|ureidopropionase, beta##AF163312|UPB1|51733|ureidopropionase, beta##AB013885|UPB1|51733|ureidopropionase, beta##BC033388|UPB1|51733|ureidopropionase, beta##BC139840|UPB1|51733|ureidopropionase, beta##BC139843|UPB1|51733|ureidopropionase, beta##CU013080|UPB1|51733|ureidopropionase, beta##CU013368|UPB1|51733|ureidopropionase, beta##NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor##EU036694|ADORA2A|135|adenosine A2a receptor##BC053529|C22orf13|83606|chromosome 22 open reading frame 13##AK296893|C22orf13|83606|chromosome 22 open reading frame 13##AK054681|C22orf13|83606|chromosome 22 open reading frame 13##AK294972|C22orf13|83606|chromosome 22 open reading frame 13##BC070109|C22orf13|83606|chromosome 22 open reading frame 13##NM_031444|C22orf13|83606|chromosome 22 open reading frame 13	0.430019	CTCF.p2:17:0.430
chr6	103067595	103067722	reg1019427.p1	7.811	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	-1220753	+	BC037954 TSC_hg19_v1_chr6_+_101846686	-1220981	+	HM149340 TSC_hg19_v1_chr6_+_101841583	-1226152	+	TSC_hg19_v1_chr6_-_105307736 AK291760	2240067	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	2240104	-	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	2240130	-	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	0.0	
chr1	90308867	90309044	reg1017376.p1	7.810	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-21391	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-21497	+	TSC_hg19_v1_chr1_+_90286603 AK092238 AX747423	-22356	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	151761	+	BC126439 BC126441 AY338397 NM_020063	873830	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	1178083	-	BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##AK092238|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644	0.860512	CTCF.p2:27:0.861
chr2	168068689	168068820	reg1019304.p1	7.810	+	EF119711 EF119717 NM_001199144 NM_001199145	-24962	+	EF119718 EF119719 EF119720 EF119721 EF119722 NM_001079810 NM_001199143 NM_152381 AK097519	-323758	+	TSC_hg19_v1_chr2_-_167350721 BC062699	-718056	-	NM_020981	606427	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	1035319	-	TSC_hg19_v1_chr2_+_169312764 AK172775	1244005	+	EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##EF119718|XIRP2|129446|xin actin-binding repeat containing 2##EF119719|XIRP2|129446|xin actin-binding repeat containing 2##EF119720|XIRP2|129446|xin actin-binding repeat containing 2##EF119721|XIRP2|129446|xin actin-binding repeat containing 2##EF119722|XIRP2|129446|xin actin-binding repeat containing 2##NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199143|XIRP2|129446|xin actin-binding repeat containing 2##NM_152381|XIRP2|129446|xin actin-binding repeat containing 2##AK097519|XIRP2|129446|xin actin-binding repeat containing 2##BC062699|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1##BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##AK172775|CERS6|253782|ceramide synthase 6	0.94368	CTCF.p2:7:0.944
chr13	32561806	32561943	reg1021121.p1	7.809	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-140972	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-248161	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-787664	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	43567	+	BC146956 BC146965 NM_001136571	324215	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	327743	+	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset	0.035844	
chr13	58201864	58201962	reg1016693.p1	7.809	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	-460518	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	-467083	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	-473654	+	NM_001040429	3875	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	4034	+	TSC_hg19_v1_chr13_+_58207858 AK307545	5983	+	AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##NM_001040429|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##AK307545|PCDH17|27253|protocadherin 17	0.863931	CTCF.p2:9:0.864
chr12	23009158	23009297	reg1016872.p1	7.808	+	TSC_hg19_v1_chr12_+_22778130 CU688188 BC006111 AL137750 AK074425	-231080	+	AF207600 TSC_hg19_v1_chr12_+_22778077 BC066907 NM_001039481 NM_018638	-231184	+	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	-311761	-	NM_178010 AK098610 AK223536	728299	-	AK074317 TSC_hg19_v1_chr12_-_24102605 BC065532 AB081589 NM_006940	1093375	-	TSC_hg19_v1_chr12_-_24103855 AK299607 AK096569	1094627	-	BC006111|ETNK1|55500|ethanolamine kinase 1##AL137750|ETNK1|55500|ethanolamine kinase 1##AK074425|ETNK1|55500|ethanolamine kinase 1##AF207600|ETNK1|55500|ethanolamine kinase 1##BC066907|ETNK1|55500|ethanolamine kinase 1##NM_001039481|ETNK1|55500|ethanolamine kinase 1##NM_018638|ETNK1|55500|ethanolamine kinase 1##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528##NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5##AK098610|SOX5|6660|SRY (sex determining region Y)-box 5##AK223536|SOX5|6660|SRY (sex determining region Y)-box 5##AK074317|SOX5|6660|SRY (sex determining region Y)-box 5##BC065532|SOX5|6660|SRY (sex determining region Y)-box 5##AB081589|SOX5|6660|SRY (sex determining region Y)-box 5##NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5##AK299607|SOX5|6660|SRY (sex determining region Y)-box 5##AK096569|SOX5|6660|SRY (sex determining region Y)-box 5	0.988104	CTCF.p2:-2:0.988
chr14	80669432	80669542	reg1017525.p1	7.808	+	NM_001105250 NM_138970 AK056530 BC059368 BC068469	-923783	+	AB018286 BC152457 NM_004796	-1799395	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-2403037	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	8417	-	AK292210 NM_000793	27909	-	NM_152446	736396	-	NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II##NM_152446|CEP128|145508|centrosomal protein 128kDa	0.886927	CTCF.p2:-3:0.887
chr17	66428015	66428156	reg1018160.p1	7.808	+	AX750577 AX750581 U79745 AK313121 AK290417 BC064832 NM_001174166 NM_004694	-140755	-	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	-172751	+	TSC_hg19_v1_chr17_+_66244233 AF208856	-183842	+	AY691424 CU691786 TSC_hg19_v1_chr17_-_66453638 BC039867 AK301830 AK000917 NM_017983	25526	-	TSC_hg19_v1_chr17_+_66508140 NM_212471 Y07642	80038	+	TSC_hg19_v1_chr17_+_66508161 BC093042	80081	+	AX750581|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G##AY691424|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##BC039867|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK301830|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK000917|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_017983|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_212471|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##Y07642|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC093042|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	0.532785	CTCF.p2:24:0.533
chr3	167600000	167600097	reg1013434.p1	7.808	+	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-146559	+	BC002506 NM_007217 AF022385 NM_145860 TSC_hg19_v1_chr3_-_167452681 BC016353 NM_145859 AK291130	-147397	-	TSC_hg19_v1_chr3_-_167371732 AK097556	-228325	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	213067	-	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	213383	-	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	1264031	-	NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC002506|PDCD10|11235|programmed cell death 10##NM_007217|PDCD10|11235|programmed cell death 10##AF022385|PDCD10|11235|programmed cell death 10##NM_145860|PDCD10|11235|programmed cell death 10##BC016353|PDCD10|11235|programmed cell death 10##NM_145859|PDCD10|11235|programmed cell death 10##AK291130|PDCD10|11235|programmed cell death 10##AK097556|WDR49|151790|WD repeat domain 49##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus	0.968849	CTCF.p2:30:0.969
chr4	10539749	10539845	reg1016489.p2	7.807	+	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-80787	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-421261	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-421319	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	146604	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	890735	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2946154	-	BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr4	173751518	173751673	reg1020132.p1	7.807	+	NM_001034845 BC047551 BC144036 BC144037 BC063015	-1016951	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-2740181	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-2740397	-	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	338357	+	BC043556 TSC_hg19_v1_chr4_-_174090314	338715	-	BC040577 TSC_hg19_v1_chr4_-_174090813	339212	-	NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.998613	CTCF.p2:8:0.999
chr8	99853218	99853352	reg1021239.p1	7.807	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	-15438	-	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	-413939	+	BC132687 BC144055 TSC_hg19_v1_chr8_-_99306600 AK024017 NM_024759	-546686	-	NM_001142462 NM_053001 TSC_hg19_v1_chr8_+_99956669 AK074518 AK291491 AK310994 BC016936 AY038073	103372	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	172210	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	172227	+	U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3##BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC132687|NIPAL2|79815|NIPA-like domain containing 2##BC144055|NIPAL2|79815|NIPA-like domain containing 2##AK024017|NIPAL2|79815|NIPA-like domain containing 2##NM_024759|NIPAL2|79815|NIPA-like domain containing 2##NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)##NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)##AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)##AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)##AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)##BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)##AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)	0.918597	CTCF.p2:-5:0.919
chr1	162817766	162817885	reg1017731.p1	7.806	+	AK022929 AF145023 NM_016371 BC065246 AK290741 BC007068 AJ249179 AF098786 AY358962 BT007075 CU675533 CU688024 GQ129366 GQ129367	-57285	+	AK225063 TSC_hg19_v1_chr1_+_162602308	-215514	+	TSC_hg19_v1_chr1_+_162602235 NM_001014796 NM_006182 AK095975 AK225196 X74764 BX640899 BC052998 AK314388	-215579	+	BC040018 AK123573 NM_178550	20752	-	NM_001102445	220570	+	DQ346664 AK295540 NM_005613	220838	+	AK022929|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF145023|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##NM_016371|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC065246|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AK290741|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC007068|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AJ249179|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF098786|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AY358962|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BT007075|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129366|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129367|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AK225063|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_001014796|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_006182|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK095975|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK225196|DDR2|4921|discoidin domain receptor tyrosine kinase 2##X74764|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BX640899|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BC052998|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK314388|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BC040018|C1orf110|339512|chromosome 1 open reading frame 110##AK123573|C1orf110|339512|chromosome 1 open reading frame 110##NM_178550|C1orf110|339512|chromosome 1 open reading frame 110##NM_001102445|RGS4|5999|regulator of G-protein signaling 4##DQ346664|RGS4|5999|regulator of G-protein signaling 4##AK295540|RGS4|5999|regulator of G-protein signaling 4##NM_005613|RGS4|5999|regulator of G-protein signaling 4	0.999865	CTCF.p2:1:1.000
chr22	40833024	40833165	reg1016302.p2	7.806	+	TSC_hg19_v1_chr22_+_40766652 AK301042	-66439	+	TSC_hg19_v1_chr22_+_40766636 AY308849 BC008078	-66453	+	TSC_hg19_v1_chr22_+_40766634 AK297599	-66462	+	TSC_hg19_v1_chr22_-_40859427 AJ297257	26336	-	TSC_hg19_v1_chr22_-_41032681 AF368061	199559	-	TSC_hg19_v1_chr22_-_41032716 BC115039 NM_020831 AF448806 AB037859 BC064620 AJ297258	199610	-	AK301042|SGSM3|27352|small G protein signaling modulator 3##AY308849|SGSM3|27352|small G protein signaling modulator 3##BC008078|SGSM3|27352|small G protein signaling modulator 3##AK297599|SGSM3|27352|small G protein signaling modulator 3##AJ297257|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF368061|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC115039|MKL1|57591|megakaryoblastic leukemia (translocation) 1##NM_020831|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF448806|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AB037859|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC064620|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AJ297258|MKL1|57591|megakaryoblastic leukemia (translocation) 1	0.526675	CTCF.p2:4:0.527
chr7	87516317	87516436	reg1014672.p2	7.806	+	AK302010 TSC_hg19_v1_chr7_+_87505937 BC022811 CU690272	-10396	+	BC036045 TSC_hg19_v1_chr7_+_87505839 AK292569 AF160249 BC014909 AF160876 BC035632 AK303175 BC047693	-10572	+	TSC_hg19_v1_chr7_-_87505673 AF125531 NM_018843	-10697	-	TSC_hg19_v1_chr7_+_87563605 BC036029 BC092465 NM_004194 NM_016351 NM_021721 NM_021722 NM_021723 AK291010 BC062433 BC125118 BC125117 AF073291 AF155381 AF155382	47207	+	AB464235 L12387 TSC_hg19_v1_chr7_-_87849352 AK295225 BC011025 M32886	332976	-	TSC_hg19_v1_chr7_-_87849391 AK129770 AK310366 NM_003130	333029	-	AK302010|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC022811|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC036045|DBF4|10926|DBF4 homolog (S. cerevisiae)##AK292569|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF160249|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC014909|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF160876|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC035632|DBF4|10926|DBF4 homolog (S. cerevisiae)##AK303175|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC047693|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF125531|SLC25A40|55972|solute carrier family 25, member 40##NM_018843|SLC25A40|55972|solute carrier family 25, member 40##BC036029|ADAM22|53616|ADAM metallopeptidase domain 22##BC092465|ADAM22|53616|ADAM metallopeptidase domain 22##NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22##NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22##AK291010|ADAM22|53616|ADAM metallopeptidase domain 22##BC062433|ADAM22|53616|ADAM metallopeptidase domain 22##BC125118|ADAM22|53616|ADAM metallopeptidase domain 22##BC125117|ADAM22|53616|ADAM metallopeptidase domain 22##AF073291|ADAM22|53616|ADAM metallopeptidase domain 22##AF155381|ADAM22|53616|ADAM metallopeptidase domain 22##AF155382|ADAM22|53616|ADAM metallopeptidase domain 22##L12387|SRI|6717|sorcin##AK295225|SRI|6717|sorcin##BC011025|SRI|6717|sorcin##M32886|SRI|6717|sorcin##AK129770|SRI|6717|sorcin##AK310366|SRI|6717|sorcin##NM_003130|SRI|6717|sorcin	0.265649	CTCF.p2:8:0.266
chr13	31035910	31036050	reg1018046.p1	7.805	+	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-154411	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	-154829	-	TSC_hg19_v1_chr13_-_30424811 NM_007106	-611139	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	4013	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	4078	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	155647	-	AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##NM_007106|UBL3|5412|ubiquitin-like 3##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1	0.82557	CTCF.p2:18:0.826
chr15	86159368	86159514	reg1017432.p2	7.805	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	-235550	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-493123	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-634115	+	AF127481 NM_144767	60826	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	178656	-	TSC_hg19_v1_chr15_-_86338178 NM_022480	178754	-	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)	0.393413	CTCF.p2:-10:0.393
chr2	103422848	103422966	reg1019197.p1	7.805	+	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	-44325	+	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	-69525	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	-69574	-	TSC_hg19_v1_chr2_-_105467912 AK096498	2045009	-	TSC_hg19_v1_chr2_+_105471877 NM_006236	2048991	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	2231607	+	CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182##AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##NM_006236|POU3F3|5455|POU class 3 homeobox 3##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9	0.991036	CTCF.p2:-2:0.991
chr7	12331629	12331734	reg1016113.p1	7.805	+	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	-80756	+	TSC_hg19_v1_chr7_-_11871825 AK092252 AX747433 NM_015204	-459892	-	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	-1318171	+	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	111851	-	NM_001135924	112170	-	AB067492 NM_001112706 AK290363 AK075123 TSC_hg19_v1_chr7_+_12610346 BC021090 AB590413 DQ892033 DQ895224 AF276507	278626	+	NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A##AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains##NM_001135924|VWDE|221806|von Willebrand factor D and EGF domains##AB067492|SCIN|85477|scinderin##NM_001112706|SCIN|85477|scinderin##AK290363|SCIN|85477|scinderin##AK075123|SCIN|85477|scinderin##BC021090|SCIN|85477|scinderin##DQ892033|SCIN|85477|scinderin##DQ895224|SCIN|85477|scinderin##AF276507|SCIN|85477|scinderin	0.144692	
chr7	48194515	48194609	reg1015713.p1	7.805	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-65607	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	-65762	+	TSC_hg19_v1_chr7_+_48128282 BC007348 NM_181597	-66273	+	AK126220 AY204751 BX647273 NM_152701	16493	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	1618708	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	1938262	-	BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##BC007348|UPP1|7378|uridine phosphorylase 1##NM_181597|UPP1|7378|uridine phosphorylase 1##AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein	0.816083	CTCF.p2:4:0.816
chr11	113865229	113865326	reg1015749.p1	7.804	+	AK299973 NM_001161772	-17056	+	AK304630 NM_000869 NM_213621 D49394 AK313896 BC004453 BC002354 AJ003078 AJ003079 AJ003080 BT007204 AB587356 AF498984 CU677922 DQ892003 DQ895193	-19356	+	AK314268 NM_006028 AF169255 AF080582 AB463385	-89691	+	TSC_hg19_v1_chr11_+_113930296 BX648973	65028	+	NM_006006 TSC_hg19_v1_chr11_+_113930432 AB208916 BC029812	65162	+	BC026902 NM_001018011	65980	+	AK299973|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##NM_001161772|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AK304630|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##NM_000869|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##NM_213621|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##D49394|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AK313896|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##BC004453|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##BC002354|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AJ003078|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AJ003079|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AJ003080|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##BT007204|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AF498984|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##DQ892003|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##DQ895193|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AK314268|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##NM_006028|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##AF169255|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##AF080582|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##BX648973|ZBTB16|7704|zinc finger and BTB domain containing 16##NM_006006|ZBTB16|7704|zinc finger and BTB domain containing 16##AB208916|ZBTB16|7704|zinc finger and BTB domain containing 16##BC029812|ZBTB16|7704|zinc finger and BTB domain containing 16##BC026902|ZBTB16|7704|zinc finger and BTB domain containing 16##NM_001018011|ZBTB16|7704|zinc finger and BTB domain containing 16	1.35738	CTCF.p2:-17:0.999	CTCF.p2:42:0.358
chr1	172795289	172795412	reg1017616.p1	7.804	+	D38122 AK314874 NM_000639 X89102 BC017502 U08137 AF288573 U11821 AB528416 DQ893466 DQ896147 CU675998 AY225406 AY858799	-167101	+	TSC_hg19_v1_chr1_+_172502291 NM_016227 AK302509 AL035291 BC137125 BC144487	-292969	+	TSC_hg19_v1_chr1_+_172502152 AK302949 AJ250075 NM_014283	-293208	+	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	224706	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	379303	-	CR542033 D90224 X79929 NM_003326	381042	-	D38122|FASLG|356|Fas ligand (TNF superfamily, member 6)##AK314874|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_000639|FASLG|356|Fas ligand (TNF superfamily, member 6)##X89102|FASLG|356|Fas ligand (TNF superfamily, member 6)##BC017502|FASLG|356|Fas ligand (TNF superfamily, member 6)##U08137|FASLG|356|Fas ligand (TNF superfamily, member 6)##AF288573|FASLG|356|Fas ligand (TNF superfamily, member 6)##U11821|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ893466|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ896147|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY225406|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY858799|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_016227|C1orf9|51430|chromosome 1 open reading frame 9##AK302509|C1orf9|51430|chromosome 1 open reading frame 9##AL035291|C1orf9|51430|chromosome 1 open reading frame 9##BC137125|C1orf9|51430|chromosome 1 open reading frame 9##BC144487|C1orf9|51430|chromosome 1 open reading frame 9##AK302949|C1orf9|51430|chromosome 1 open reading frame 9##AJ250075|C1orf9|51430|chromosome 1 open reading frame 9##NM_014283|C1orf9|51430|chromosome 1 open reading frame 9##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	0.354607	CTCF.p2:-17:0.355
chr19	51172745	51172876	reg1018207.p1	7.804	+	TSC_hg19_v1_chr19_+_51152634 NM_001195076	-20143	+	NM_001160328 NM_001160329 BC031067 BC028379 TSC_hg19_v1_chr19_-_51143094	-29685	-	AL136594 NM_032298	-31509	-	AF163302 NM_016148	47384	-	TSC_hg19_v1_chr19_-_51223037 EU872208	50244	-	TSC_hg19_v1_chr19_+_51226620 AF020044 NM_002975 AK314141	53803	+	NM_001195076|C19orf81|342918|chromosome 19 open reading frame 81##NM_001160328|SYT3|84258|synaptotagmin III##NM_001160329|SYT3|84258|synaptotagmin III##BC031067|SYT3|84258|synaptotagmin III##BC028379|SYT3|84258|synaptotagmin III##AL136594|SYT3|84258|synaptotagmin III##NM_032298|SYT3|84258|synaptotagmin III##AF163302|SHANK1|50944|SH3 and multiple ankyrin repeat domains 1##NM_016148|SHANK1|50944|SH3 and multiple ankyrin repeat domains 1##AF020044|CLEC11A|6320|C-type lectin domain family 11, member A##NM_002975|CLEC11A|6320|C-type lectin domain family 11, member A##AK314141|CLEC11A|6320|C-type lectin domain family 11, member A	0.973994	CTCF.p2:-1:0.974
chr5	119794081	119794194	reg1014160.p2	7.804	+	BC011941 TSC_hg19_v1_chr5_-_119740564	-53587	-	AF427126 AY692447 NM_001163991 NM_182761 BC040622 BC128242 BC128243	-828821	+	TSC_hg19_v1_chr5_+_118788215 NM_000414 NM_001199292 AK301212 AK312449 NM_001199291 BC003098 AK293254 AB208932 X87176 AK299685 AK298075 CU678374 DQ891866 DQ895055	-1005941	+	TSC_hg19_v1_chr5_+_119799994 BC092474	5811	+	TSC_hg19_v1_chr5_+_119800010 AF242769 NM_016644	5874	+	BC034419 NM_177478 HQ258558	1393516	+	AF427126|FAM170A|340069|family with sequence similarity 170, member A##AY692447|FAM170A|340069|family with sequence similarity 170, member A##NM_001163991|FAM170A|340069|family with sequence similarity 170, member A##NM_182761|FAM170A|340069|family with sequence similarity 170, member A##BC040622|FAM170A|340069|family with sequence similarity 170, member A##BC128242|FAM170A|340069|family with sequence similarity 170, member A##BC128243|FAM170A|340069|family with sequence similarity 170, member A##NM_000414|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199292|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK301212|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK312449|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199291|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC003098|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK293254|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##X87176|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK299685|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK298075|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ891866|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ895055|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC092474|PRR16|51334|proline rich 16##AF242769|PRR16|51334|proline rich 16##NM_016644|PRR16|51334|proline rich 16##BC034419|FTMT|94033|ferritin mitochondrial##NM_177478|FTMT|94033|ferritin mitochondrial##HQ258558|FTMT|94033|ferritin mitochondrial	0.694154	CTCF.p2:18:0.694
chr9	38417133	38417264	reg1018298.p1	7.803	+	TSC_hg19_v1_chr9_+_38392760 AK297020 BC001619 AK225950	-24456	+	TSC_hg19_v1_chr9_+_38392698 AK313344	-24501	+	TSC_hg19_v1_chr9_+_38392669 NM_000692	-24525	+	TSC_hg19_v1_chr9_-_38424452 AB463783 NM_001007563	7267	-	AB385522 AB095935 BC152434 NM_147195	203123	-	TSC_hg19_v1_chr9_-_38620602 BC056266	203425	-	AK297020|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##BC001619|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK225950|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK313344|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##NM_001007563|IGFBPL1|347252|insulin-like growth factor binding protein-like 1##AB095935|ANKRD18A|253650|ankyrin repeat domain 18A##BC152434|ANKRD18A|253650|ankyrin repeat domain 18A##NM_147195|ANKRD18A|253650|ankyrin repeat domain 18A##BC056266|ANKRD18A|253650|ankyrin repeat domain 18A	0.904907	CTCF.p2:-19:0.905
chr16	11058033	11058171	reg1016041.p1	7.802	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-19659	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-21867	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-21936	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	291948	-	X63758 BC096135 BC096136 BC096137 NM_005425	305036	-	NM_021247	309349	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.883756	CTCF.p2:-46:0.884
chr9	75368288	75368421	reg1022016.p1	7.802	+	AF417578 NM_138691	-231638	+	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	-388254	-	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	-388629	-	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	199591	-	NM_000689	199878	-	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	398424	+	AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1	0.17412	
chr12	113338240	113338357	reg1017722.p1	7.801	+	AK316112 TSC_hg19_v1_chr12_+_113229745 BC017259	-108569	+	NM_001143854 NM_014954	-108750	+	S39383 TSC_hg19_v1_chr12_+_112924353	-413979	+	NM_001032409 NM_002534 NM_016816 TSC_hg19_v1_chr12_+_113344763 X04371 BC000562 AK291003 BC071981 AK225384 D00068	6469	+	AJ629455 X02874 BC061587 TSC_hg19_v1_chr12_+_113344822 AK223006 AK301498 AY730627 AY730628 AB590117 BT006785 DQ891892 DQ895079 AK300346	6535	+	TSC_hg19_v1_chr12_+_113376159 AB044545	37799	+	AK316112|RPH3A|22895|rabphilin 3A homolog (mouse)##BC017259|RPH3A|22895|rabphilin 3A homolog (mouse)##NM_001143854|RPH3A|22895|rabphilin 3A homolog (mouse)##NM_014954|RPH3A|22895|rabphilin 3A homolog (mouse)##S39383|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##NM_001032409|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##NM_002534|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##NM_016816|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##X04371|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##BC000562|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##AK291003|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##BC071981|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##AK225384|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##D00068|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##AJ629455|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##X02874|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##BC061587|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##AK223006|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##AK301498|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##AY730627|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##AY730628|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##BT006785|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##DQ891892|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##DQ895079|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##AK300346|OAS1|4938|2'-5'-oligoadenylate synthetase 1, 40/46kDa##AB044545|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa	0.826808	CTCF.p2:-16:0.827
chr6	2449118	2449239	reg1016652.p1	7.801	+	TSC_hg19_v1_chr6_+_2245995 AK023629	-203165	+	CR541929 CR541947 DQ892789 DQ896036 AF042377 TSC_hg19_v1_chr6_-_2245809 AK130651 AK313953 BC000117 NM_001500	-203380	-	AF040260 NM_001253846	-272954	-	NM_152554	186119	-	BX647582 NM_001012418 AK096893	301998	-	TSC_hg19_v1_chr6_+_2765561 AK315047	316402	+	CR541929|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541947|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ892789|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ896036|GMDS|2762|GDP-mannose 4,6-dehydratase##AF042377|GMDS|2762|GDP-mannose 4,6-dehydratase##AK130651|GMDS|2762|GDP-mannose 4,6-dehydratase##AK313953|GMDS|2762|GDP-mannose 4,6-dehydratase##BC000117|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001500|GMDS|2762|GDP-mannose 4,6-dehydratase##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_152554|C6orf195|154386|chromosome 6 open reading frame 195##BX647582|MYLK4|340156|myosin light chain kinase family, member 4##NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4##AK096893|MYLK4|340156|myosin light chain kinase family, member 4##AK315047|WRNIP1|56897|Werner helicase interacting protein 1	0.672996	CTCF.p2:-4:0.673
chr8	12219430	12219568	reg1018255.p2	7.801	+	DQ012022 NM_001037804 NM_001195257	-43675	-	AK309984 BC062615 BC072459 BC098427 BC048297 AK098138 AK308513 AK297741 AK308439 BC085016 NM_001083537 AK291001 AK298940	-167912	-	AY509884 NM_201402	-223231	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	74344	-	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	74405	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	393505	-	DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##BC062615|FAM86B1|85002|family with sequence similarity 86, member B1##BC098427|FAM86B1|85002|family with sequence similarity 86, member B1##BC048297|FAM86B1|85002|family with sequence similarity 86, member B1##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##NM_001083537|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##NM_201402|USP17L2|377630|ubiquitin specific peptidase 17-like 2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1	0.992615	CTCF.p2:-9:0.977
chr15	95120294	95120420	reg1020304.p1	7.800	+	NM_001159644 BC025708 BC111024 AK002037	-221048	+	NM_001159643 NM_018349 AY656717 BC131527	-278896	+	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	-345499	+	TSC_hg19_v1_chr15_-_95870310 BC040875	749962	-	BC106083 NM_001145155 FM208183	1748804	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	1753620	+	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##BC040875|LOC400456|400456|uncharacterized LOC400456##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	1.009985	CTCF.p2:0:0.996
chr1	840099	840234	reg1021650.p1	7.800	+	TSC_hg19_v1_chr1_+_763052 AK311121 AK311732 AK026873 BC102012 BC102023 BC107481	-77096	+	BC042880 TSC_hg19_v1_chr1_+_763038	-77153	+	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	-77271	-	TSC_hg19_v1_chr1_+_861084 NM_152486	20935	+	AB463150 AM393843 CU678496 TSC_hg19_v1_chr1_-_894632 AL050019 AK024284 AK225239 BC009786	54462	-	TSC_hg19_v1_chr1_-_894646 AK315080	54479	-	AK311732|LOC643837|643837|uncharacterized LOC643837##AK026873|LOC643837|643837|uncharacterized LOC643837##BC102012|LOC643837|643837|uncharacterized LOC643837##BC102023|LOC643837|643837|uncharacterized LOC643837##BC107481|LOC643837|643837|uncharacterized LOC643837##BC042880|LOC643837|643837|uncharacterized LOC643837##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115##NM_152486|SAMD11|148398|sterile alpha motif domain containing 11##AM393843|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AL050019|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK024284|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK225239|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##BC009786|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK315080|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)	0.999863	CTCF.p2:-9:1.000
chr7	1513805	1513894	reg1016991.p2	7.800	+	TSC_hg19_v1_chr7_-_1499107 AK027124 NM_182924	-14742	-	CU691530 EU832111 EU832205 AK074068 BC037988 TSC_hg19_v1_chr7_-_1499102	-14816	-	TSC_hg19_v1_chr7_+_1272552 NM_001080461	-241247	+	TSC_hg19_v1_chr7_-_1544019 AK093809 AX748318 NM_001080453	30184	-	TSC_hg19_v1_chr7_+_1570337 AF059194 NM_002360	56495	+	TSC_hg19_v1_chr7_+_1577118 AK092414	63273	+	AK027124|MICALL2|79778|MICAL-like 2##NM_182924|MICALL2|79778|MICAL-like 2##EU832111|MICALL2|79778|MICAL-like 2##EU832205|MICALL2|79778|MICAL-like 2##AK074068|MICALL2|79778|MICAL-like 2##BC037988|MICALL2|79778|MICAL-like 2##NM_001080461|UNCX|340260|UNC homeobox##NM_001080453|INTS1|26173|integrator complex subunit 1##AF059194|MAFK|7975|v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)##NM_002360|MAFK|7975|v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)##AK092414|MAFK|7975|v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)	0.952442	CTCF.p2:0:0.952
chr8	12342882	12342980	reg1017743.p2	7.800	+	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-49027	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-49088	-	DQ012022 NM_001037804 NM_001195257	-167107	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	270073	-	AK296010 NM_020844	460235	+	AB040889 NM_001099677	526841	+	BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456	0.662186	CTCF.p2:1:0.662
chr16	2473205	2473354	reg1017408.p1	7.799	+	TSC_hg19_v1_chr16_-_2390785 AB210044 NM_001089	-82513	-	TSC_hg19_v1_chr16_-_2390730 BC151840	-82557	-	AK310864 U78735 TSC_hg19_v1_chr16_-_2390699	-82632	-	TSC_hg19_v1_chr16_+_2479392 NM_001761	6112	+	TSC_hg19_v1_chr16_+_2479464 Z36714 AK313371 U17105 BC012349 AB208829 DQ890775	6170	+	AK128408 TSC_hg19_v1_chr16_+_2510099 NM_025108 AK093788 AK301929 AX748307 BC018719 AK023971	36833	+	AB210044|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##NM_001089|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##BC151840|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##AK310864|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##U78735|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##NM_001761|CCNF|899|cyclin F##Z36714|CCNF|899|cyclin F##AK313371|CCNF|899|cyclin F##U17105|CCNF|899|cyclin F##BC012349|CCNF|899|cyclin F##AB208829|CCNF|899|cyclin F##DQ890775|CCNF|899|cyclin F##AK128408|C16orf59|80178|chromosome 16 open reading frame 59##NM_025108|C16orf59|80178|chromosome 16 open reading frame 59##AK093788|C16orf59|80178|chromosome 16 open reading frame 59##AK301929|C16orf59|80178|chromosome 16 open reading frame 59##BC018719|C16orf59|80178|chromosome 16 open reading frame 59##AK023971|C16orf59|80178|chromosome 16 open reading frame 59	0.0	
chr17_ctg5_hap1	1226746	1226861	reg1016839.p1	7.799	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.052466	
chr4	169075128	169075271	reg1020434.p1	7.799	+	NM_007193 BC007320 AF196478 AJ238979 CU675613 EU176730	-61430	+	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	-919459	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	-919495	-	TSC_hg19_v1_chr4_-_169239951 AK001649 BC038115 AK307404 NM_017631	164706	-	TSC_hg19_v1_chr4_-_169401573 AK096369	326381	-	TSC_hg19_v1_chr4_-_169401630 CR933601 NM_001012967	326421	-	NM_007193|ANXA10|11199|annexin A10##BC007320|ANXA10|11199|annexin A10##AF196478|ANXA10|11199|annexin A10##AJ238979|ANXA10|11199|annexin A10##EU176730|ANXA10|11199|annexin A10##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK001649|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##BC038115|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##AK307404|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##NM_017631|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##AK096369|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like##CR933601|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like##NM_001012967|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like	0.971445	CTCF.p2:10:0.971
chr9	2181940	2182048	reg1017079.p2	7.799	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-166698	+	AF130729 NM_181872	-1131385	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-1131624	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	439813	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	440080	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	440118	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.17848	
chrX	68280612	68280751	reg1016862.p1	7.799	+	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	-231826	+	TSC_hg19_v1_chrX_+_67913490 D80011	-367190	+	TSC_hg19_v1_chrX_+_67913480 AK291747 NM_001142504	-367201	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	104625	-	AF087142 NM_015686 BC136518 BC136519	444402	+	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	555254	+	BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK291747|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142504|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B##AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A	0.875775	CTCF.p2:41:0.876
chr12	57637572	57637686	reg1018465.p3	7.798	+	BC011910 NM_020142 AK094275	-3129	-	CR457176 AF164796 AK129629 TSC_hg19_v1_chr12_-_57630888	-6750	-	NM_001166358 BX647711 AK301443 TSC_hg19_v1_chr12_+_57623972 BX648847 NM_001166359 NM_001166357 BC004189 BC004215 BC008711 AK296183 AK297173 AK315916	-13641	+	TSC_hg19_v1_chr12_-_57642922 CU675915	5351	-	AK300688 BC008069 AK057013 AK311513 NM_145064	7307	-	TSC_hg19_v1_chr12_-_57674254 X85326	36648	-	BC011910|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##NM_020142|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AK094275|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##CR457176|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AF164796|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AK129629|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##NM_001166358|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX647711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301443|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX648847|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166359|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166357|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK296183|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK297173|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK315916|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK300688|STAC3|246329|SH3 and cysteine rich domain 3##BC008069|STAC3|246329|SH3 and cysteine rich domain 3##AK057013|STAC3|246329|SH3 and cysteine rich domain 3##AK311513|STAC3|246329|SH3 and cysteine rich domain 3##NM_145064|STAC3|246329|SH3 and cysteine rich domain 3	0.34419	CTCF.p2:5:0.344
chr15	75135567	75135721	reg1014561.p2	7.797	+	TSC_hg19_v1_chr15_-_75135524 BC157884 NM_001099436 AL117482	-39	-	TSC_hg19_v1_chr15_-_75135498 AK293181 BC036117	-144	-	BC048289 TSC_hg19_v1_chr15_-_75135479	-165	-	CR456800 AF005038 TSC_hg19_v1_chr15_-_75165693 AK315516 BC001376 BC004385 NM_005697 AK096794 AK096376 AK291884	30011	-	TSC_hg19_v1_chr15_+_75182388 AK294030 AK301370 AK302354 BX648475 AF504648 AK225149 BC046357 AK292374 BC017351 NM_002435 X76057 CU692334 AB529030	46748	+	AK025373 TSC_hg19_v1_chr15_-_75194610	58932	-	BC157884|ULK3|25989|unc-51-like kinase 3 (C. elegans)##NM_001099436|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AL117482|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK293181|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC036117|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC048289|ULK3|25989|unc-51-like kinase 3 (C. elegans)##CR456800|SCAMP2|10066|secretory carrier membrane protein 2##AF005038|SCAMP2|10066|secretory carrier membrane protein 2##AK315516|SCAMP2|10066|secretory carrier membrane protein 2##BC001376|SCAMP2|10066|secretory carrier membrane protein 2##BC004385|SCAMP2|10066|secretory carrier membrane protein 2##NM_005697|SCAMP2|10066|secretory carrier membrane protein 2##AK096794|SCAMP2|10066|secretory carrier membrane protein 2##AK096376|SCAMP2|10066|secretory carrier membrane protein 2##AK291884|SCAMP2|10066|secretory carrier membrane protein 2##AK294030|MPI|4351|mannose phosphate isomerase##AK301370|MPI|4351|mannose phosphate isomerase##AK302354|MPI|4351|mannose phosphate isomerase##BX648475|MPI|4351|mannose phosphate isomerase##AF504648|MPI|4351|mannose phosphate isomerase##AK225149|MPI|4351|mannose phosphate isomerase##BC046357|MPI|4351|mannose phosphate isomerase##AK292374|MPI|4351|mannose phosphate isomerase##BC017351|MPI|4351|mannose phosphate isomerase##NM_002435|MPI|4351|mannose phosphate isomerase##X76057|MPI|4351|mannose phosphate isomerase##AK025373|C15orf17|57184|chromosome 15 open reading frame 17	0.010762	
chr3	58223349	58223476	reg1017962.p2	7.797	+	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	-129	+	NM_004944	-23015	-	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	-229265	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	118	+	TSC_hg19_v1_chr3_+_58291985 NM_001098783 NM_007042	68558	+	TSC_hg19_v1_chr3_+_58292000 AF001175	68588	+	NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6##NM_001098783|RPP14|11102|ribonuclease P/MRP 14kDa subunit##NM_007042|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AF001175|RPP14|11102|ribonuclease P/MRP 14kDa subunit	0.015432	
chr18	60253548	60253676	reg1017362.p2	7.796	+	NM_017742 TSC_hg19_v1_chr18_+_60190696 BC006340	-62858	+	AB209762 AF018253 NM_003839 AB527346	-261062	+	TSC_hg19_v1_chr18_+_59855176 AB384606	-398402	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	129052	+	TSC_hg19_v1_chr18_+_60383911 AB011178	130314	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	130696	+	NM_017742|ZCCHC2|54877|zinc finger, CCHC domain containing 2##BC006340|ZCCHC2|54877|zinc finger, CCHC domain containing 2##AB209762|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##AF018253|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_003839|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1	0.989509	CTCF.p2:-6:0.990
chr19	51297690	51297831	reg1018854.p1	7.796	+	AB463389 NM_033068	-4089	+	BC095544 BC067453 BC067454 NM_001506	-23972	+	TSC_hg19_v1_chr19_+_51226662 AY870345 AB009244 AB528595 BT019673 CU675163	-71038	+	TSC_hg19_v1_chr19_-_51307892 NM_199250 NM_199249	10159	-	BT007253 S77952 DQ893072 DQ896328 AY703451 BC005313 M25629 X13561 AK293363 AY429508 NM_002257	29262	-	AY373373 AY373374 CU686842 CU686864 HQ258133 BC126137 BC144045 BC144046 BC144047 AF303046 BC069480 BC069507 BC069518 NM_017509 NM_138563 NM_138564	37002	-	NM_033068|ACPT|93650|acid phosphatase, testicular##BC095544|GPR32|2854|G protein-coupled receptor 32##BC067453|GPR32|2854|G protein-coupled receptor 32##BC067454|GPR32|2854|G protein-coupled receptor 32##NM_001506|GPR32|2854|G protein-coupled receptor 32##AY870345|CLEC11A|6320|C-type lectin domain family 11, member A##AB009244|CLEC11A|6320|C-type lectin domain family 11, member A##BT019673|CLEC11A|6320|C-type lectin domain family 11, member A##NM_199250|C19orf48|84798|chromosome 19 open reading frame 48##NM_199249|C19orf48|84798|chromosome 19 open reading frame 48##BT007253|KLK1|3816|kallikrein 1##S77952|KLK1|3816|kallikrein 1##DQ893072|KLK1|3816|kallikrein 1##DQ896328|KLK1|3816|kallikrein 1##AY703451|KLK1|3816|kallikrein 1##BC005313|KLK1|3816|kallikrein 1##M25629|KLK1|3816|kallikrein 1##X13561|KLK1|3816|kallikrein 1##AY429508|KLK1|3816|kallikrein 1##NM_002257|KLK1|3816|kallikrein 1##AY373373|KLK15|55554|kallikrein-related peptidase 15##AY373374|KLK15|55554|kallikrein-related peptidase 15##HQ258133|KLK15|55554|kallikrein-related peptidase 15##BC126137|KLK15|55554|kallikrein-related peptidase 15##BC144045|KLK15|55554|kallikrein-related peptidase 15##BC144046|KLK15|55554|kallikrein-related peptidase 15##BC144047|KLK15|55554|kallikrein-related peptidase 15##AF303046|KLK15|55554|kallikrein-related peptidase 15##BC069480|KLK15|55554|kallikrein-related peptidase 15##BC069507|KLK15|55554|kallikrein-related peptidase 15##BC069518|KLK15|55554|kallikrein-related peptidase 15##NM_017509|KLK15|55554|kallikrein-related peptidase 15##NM_138563|KLK15|55554|kallikrein-related peptidase 15##NM_138564|KLK15|55554|kallikrein-related peptidase 15	0.296036	CTCF.p2:-20:0.246
chr10	76497990	76498118	reg1013646.p1	7.794	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-561467	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-561524	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-561572	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	88300	+	AY686755 NM_001003892 BC137321 BC137322	320251	-	AB027004 AB103375 NM_016364	361193	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.083589	
chr7	116628595	116628705	reg1013732.p1	7.794	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	-35077	+	TSC_hg19_v1_chr7_+_116593397 BC075855 NM_018412 NM_021908 AF234882 AF234883	-35265	+	TSC_hg19_v1_chr7_+_116502640 BC005338 AK293405 AK294409 AK315915 AK222989 AK223004 U03269 BC015963 BT006735 CU675123 U03851	-126018	+	TSC_hg19_v1_chr7_+_116660271 AK093212	31617	+	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	31715	+	BC078170 AK056742 NM_003391 X07876	334685	-	AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##BC075855|ST7|7982|suppression of tumorigenicity 7##NM_018412|ST7|7982|suppression of tumorigenicity 7##NM_021908|ST7|7982|suppression of tumorigenicity 7##AF234882|ST7|7982|suppression of tumorigenicity 7##AF234883|ST7|7982|suppression of tumorigenicity 7##BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK093212|ST7|7982|suppression of tumorigenicity 7##AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2	0.993556	CTCF.p2:-22:0.994
chr8	64213424	64213550	reg1020098.p1	7.793	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-132287	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-132343	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-214860	-	NM_152414 AK293979	1279371	+	TSC_hg19_v1_chr8_+_65493611 AK091333	1280177	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	1497792	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.992616	CTCF.p2:4:0.993
chr8	7085706	7085815	reg1019240.p1	7.793	+	BC107079 BC069690 NM_021010	-171506	-	BC093791 BC112188 BC069423 M21130 M23281 BC119706 X52053 BC027917 M26602 NM_005217 X13621 NM_001042500 NM_004084	-209961	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	-229060	-	NM_001164452 NM_001164456	28665	+	NM_001164452 NM_001164456	51531	+	NM_001164455	59153	+	BC107079|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC069690|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##NM_021010|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M23281|DEFA3|1668|defensin, alpha 3, neutrophil-specific##BC119706|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X52053|DEFA1|1667|defensin, alpha 1##BC027917|DEFA3|1668|defensin, alpha 3, neutrophil-specific##M26602|DEFA1|1667|defensin, alpha 1##NM_005217|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X13621|DEFA3|1668|defensin, alpha 3, neutrophil-specific##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164455|FAM90A5|441315|family with sequence similarity 90, member A5	0.999491	CTCF.p2:8:0.999
chr17	77785270	77785397	reg1018050.p1	7.792	+	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-14426	-	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	-33352	+	AY230663 BC041453 NM_178543 AY358622	-80444	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	27809	-	BC044939 TSC_hg19_v1_chr17_+_77893233	107866	+	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	224269	-	EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16	1.024285	CTCF.p2:-4:0.987
chrX	83301542	83301672	reg1015140.p1	7.791	+	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	-185436	+	AK314967 NM_000307 TSC_hg19_v1_chrX_+_82763302 X82324 AB464667	-538308	+	TSC_hg19_v1_chrX_+_80457600 BC016709 AL136718 AK129610 AF042081 AK310011 AB590910 CR533478	-2843959	+	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	141365	-	BC101720 BC101722 BC143522 BX538112 AK055240 AK290050 BX649166 NM_001177478 NM_001177479 NM_144657	455835	-	AK130506 NM_198450 AY358193 BC107095 BC107096 CR749250	957260	+	BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##AK314967|POU3F4|5456|POU class 3 homeobox 4##NM_000307|POU3F4|5456|POU class 3 homeobox 4##X82324|POU3F4|5456|POU class 3 homeobox 4##BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC101720|HDX|139324|highly divergent homeobox##BC101722|HDX|139324|highly divergent homeobox##BC143522|HDX|139324|highly divergent homeobox##BX538112|HDX|139324|highly divergent homeobox##AK055240|HDX|139324|highly divergent homeobox##AK290050|HDX|139324|highly divergent homeobox##BX649166|HDX|139324|highly divergent homeobox##NM_001177478|HDX|139324|highly divergent homeobox##NM_001177479|HDX|139324|highly divergent homeobox##NM_144657|HDX|139324|highly divergent homeobox##AK130506|APOOL|139322|apolipoprotein O-like##NM_198450|APOOL|139322|apolipoprotein O-like##AY358193|APOOL|139322|apolipoprotein O-like##BC107095|APOOL|139322|apolipoprotein O-like##BC107096|APOOL|139322|apolipoprotein O-like##CR749250|APOOL|139322|apolipoprotein O-like	0.998177	CTCF.p2:-11:0.998
chr16	81462684	81462800	reg1018949.p1	7.790	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-114092	+	TSC_hg19_v1_chr16_+_81348566 AK095378 NM_022041 AF291673	-114173	+	AK296011 AF294900 AK001592 BC022269 NM_017429 BC126210 BC126212 HQ258298	-190339	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	16091	+	AY172689 NM_030629	66211	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	350155	+	BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##AK095378|GAN|8139|gigaxonin##NM_022041|GAN|8139|gigaxonin##AF291673|GAN|8139|gigaxonin##AK296011|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##AF294900|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##AK001592|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC022269|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##NM_017429|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC126210|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC126212|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##HQ258298|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.016297	
chr1	74934790	74934937	reg1020268.p1	7.790	+	NM_015978 AF116826 AK307984 BC113539 BC117262 AY303691 HQ258528	-233761	+	NM_001112808 NM_001199327 NM_001199328 NM_001199329 NM_003838 TSC_hg19_v1_chr1_+_74663927 BC020720 AK294948 AF017445 AK304490 BC032865 AK223254 BC032308 AK299468	-270927	+	AK131476 BC020778 BX647210 TSC_hg19_v1_chr1_-_74663861 NM_001105659	-271015	-	AK127470 NM_001002912	204558	-	TSC_hg19_v1_chr1_-_75198733 AK128794 BX647883 BC039578 AK223150 AK223201 AB209714 AK314813 BC070058	263849	-	NM_001162916 AK098237 BC071765 NM_138467 AK294264 AK299849 BC009514 AK311272 AB590606	264017	+	NM_015978|TNNI3K|51086|TNNI3 interacting kinase##AF116826|TNNI3K|51086|TNNI3 interacting kinase##AK307984|TNNI3K|51086|TNNI3 interacting kinase##BC113539|TNNI3K|51086|TNNI3 interacting kinase##BC117262|TNNI3K|51086|TNNI3 interacting kinase##AY303691|TNNI3K|51086|TNNI3 interacting kinase##HQ258528|TNNI3K|51086|TNNI3 interacting kinase##NM_001112808|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199327|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199328|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_001199329|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_003838|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC020720|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK294948|FPGT|8790|fucose-1-phosphate guanylyltransferase##AF017445|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK304490|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032865|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##AK223254|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032308|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK299468|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK131476|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BC020778|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BX647210|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001105659|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##AK127470|C1orf173|127254|chromosome 1 open reading frame 173##NM_001002912|C1orf173|127254|chromosome 1 open reading frame 173##AK128794|CRYZ|1429|crystallin, zeta (quinone reductase)##BX647883|CRYZ|1429|crystallin, zeta (quinone reductase)##BC039578|CRYZ|1429|crystallin, zeta (quinone reductase)##AK223150|CRYZ|1429|crystallin, zeta (quinone reductase)##AK223201|CRYZ|1429|crystallin, zeta (quinone reductase)##AB209714|CRYZ|1429|crystallin, zeta (quinone reductase)##AK314813|CRYZ|1429|crystallin, zeta (quinone reductase)##BC070058|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001162916|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK098237|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC071765|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##NM_138467|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK294264|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK299849|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC009514|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK311272|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)	0.82847	CTCF.p2:18:0.828
chr5	164636281	164636371	reg1015815.p1	7.790	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-1703683	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-1706038	+	NM_001142556 NM_001142557 NM_012484 NM_012485 BC057235 AK313603 BC030505 TSC_hg19_v1_chr5_+_162887665 AK302975 BC006984 AK303616 BC070281 BC017793 U29343 AF032862 BC108904 BC108905 BC107869 AK290577	-1748731	+	HE578282 HE578283 NM_001122679	2075516	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	3082495	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	3277148	+	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001142556|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001142557|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012484|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012485|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC057235|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK313603|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC030505|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK302975|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK303616|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC070281|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC017793|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##U29343|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AF032862|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108904|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108905|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC107869|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK290577|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.881607	CTCF.p2:-3:0.882
chr9	129709957	129710099	reg1017586.p2	7.790	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	-32924	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	-87084	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	-142718	+	AF221098 NM_001190728 AB385313 CU689706	14507	+	AK075026 TSC_hg19_v1_chr9_-_129870392	160324	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	174880	-	AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AF221098|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190728|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK075026|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2	0.0	
chr10	73886080	73886201	reg1020357.p1	7.789	+	D87465 TSC_hg19_v1_chr10_-_73848773 NM_001134434 NM_014767	-37363	-	BC023558 NM_001244950	-37610	-	TSC_hg19_v1_chr10_-_73848310 AJ001453	-37800	-	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	89624	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	89648	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	89971	-	D87465|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##NM_001134434|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##NM_014767|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##BC023558|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##NM_001244950|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AJ001453|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1	0.950158	CTCF.p2:0:0.950
chr1	209527797	209527917	reg1016086.p1	7.789	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-1110208	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-1443300	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-1443474	-	AK091113 AX746785 NM_001104548	74308	+	NM_020439 AK095713 AK289675 AF428261 BC032787	229203	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	296822	-	NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3	0.996292	CTCF.p2:-11:0.996
chr12	10343521	10343631	reg1017550.p1	7.789	+	NM_153022 AY358845 AK055728	-11983	+	AB102861 AB590414 CU692540 DQ891409 DQ894585 AF035776 AK292124 AK295409 AK298040 BC022295 BC055085 AB010710 AK308009 NM_001172632 NM_001172633 NM_002543	-18844	-	AF400595 AF400596 AF400597 AF400598 AF400599 AF400600 AF400601 AF400602 AY026769 AY026770 AY026771 CU687154 AF313469 BC013385 AY009090 AK297028 BC093829 BC093831 BC071746 AK298679 AK298724 AK313247 CR749536 AK295108 AF313468 AJ312372 AJ312373 AY359002 AK294111 NM_022570 NM_197947 NM_197948 NM_197949 NM_197950 NM_197954	-60803	-	AF287012 TSC_hg19_v1_chr12_+_10365506 AF087847 AK303581 AK315418 AK074195 BC028315 NM_031412 BC009309 AL136676 BX648781 BC008891	21900	+	AK291506 AY227806 NM_001114396	113470	+	NM_002262 NM_007334 AF498040 AF498041 AY327501 U30610 BC028009 AB009597 AJ000001	116956	+	NM_153022|C12orf59|120939|chromosome 12 open reading frame 59##AY358845|C12orf59|120939|chromosome 12 open reading frame 59##AK055728|C12orf59|120939|chromosome 12 open reading frame 59##AB102861|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##DQ891409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##DQ894585|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AF035776|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK292124|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK295409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK298040|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##BC022295|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##BC055085|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AB010710|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK308009|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_001172632|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_001172633|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_002543|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AF400595|CLEC7A|64581|C-type lectin domain family 7, member A##AF400596|CLEC7A|64581|C-type lectin domain family 7, member A##AF400597|CLEC7A|64581|C-type lectin domain family 7, member A##AF400598|CLEC7A|64581|C-type lectin domain family 7, member A##AF400599|CLEC7A|64581|C-type lectin domain family 7, member A##AF400600|CLEC7A|64581|C-type lectin domain family 7, member A##AF400601|CLEC7A|64581|C-type lectin domain family 7, member A##AF400602|CLEC7A|64581|C-type lectin domain family 7, member A##AY026769|CLEC7A|64581|C-type lectin domain family 7, member A##AY026770|CLEC7A|64581|C-type lectin domain family 7, member A##AY026771|CLEC7A|64581|C-type lectin domain family 7, member A##AF313469|CLEC7A|64581|C-type lectin domain family 7, member A##BC013385|CLEC7A|64581|C-type lectin domain family 7, member A##AY009090|CLEC7A|64581|C-type lectin domain family 7, member A##AK297028|CLEC7A|64581|C-type lectin domain family 7, member A##BC093829|CLEC7A|64581|C-type lectin domain family 7, member A##BC093831|CLEC7A|64581|C-type lectin domain family 7, member A##BC071746|CLEC7A|64581|C-type lectin domain family 7, member A##AK298679|CLEC7A|64581|C-type lectin domain family 7, member A##AK298724|CLEC7A|64581|C-type lectin domain family 7, member A##AK313247|CLEC7A|64581|C-type lectin domain family 7, member A##CR749536|CLEC7A|64581|C-type lectin domain family 7, member A##AK295108|CLEC7A|64581|C-type lectin domain family 7, member A##AF313468|CLEC7A|64581|C-type lectin domain family 7, member A##AJ312372|CLEC7A|64581|C-type lectin domain family 7, member A##AJ312373|CLEC7A|64581|C-type lectin domain family 7, member A##AY359002|CLEC7A|64581|C-type lectin domain family 7, member A##AK294111|CLEC7A|64581|C-type lectin domain family 7, member A##NM_022570|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197947|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197948|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197949|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197950|CLEC7A|64581|C-type lectin domain family 7, member A##NM_197954|CLEC7A|64581|C-type lectin domain family 7, member A##AF287012|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AF087847|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK303581|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK315418|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK074195|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC028315|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##NM_031412|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC009309|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AL136676|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BX648781|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC008891|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK291506|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AY227806|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_001114396|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_002262|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_007334|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AF498040|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AF498041|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AY327501|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##U30610|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##BC028009|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AB009597|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AJ000001|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1	0.946129	CTCF.p2:2:0.946
chr22	21457205	21457306	reg1015997.p1	7.789	+	BC062565 AJ000730 BC008814 NM_004173 TSC_hg19_v1_chr22_-_21386851	-70404	-	BC064805 NM_001159554 AB002058 CR456535 BC109209 AB528202 CU013135 CU013423 AK309079 NM_005446 BC047287 BC063553 BC033488	-87795	+	TSC_hg19_v1_chr22_+_21356508 AK096901 BC065749	-100774	+	NM_001128633	280407	+	NM_001128635	280784	+	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	314421	+	BC062565|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AJ000730|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC008814|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_004173|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC064805|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_001159554|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AB002058|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CR456535|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC109209|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013135|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013423|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK309079|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_005446|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC047287|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC063553|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC033488|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK096901|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##BC065749|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2	0.970401	CTCF.p2:2:0.970
chr5	143583457	143583550	reg1014601.p1	7.789	+	AK292477 CR749266 NM_020768	-33088	+	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	-33257	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	-33327	-	TSC_hg19_v1_chr5_-_145214906 BC028175 AK095695 AK125215 NM_182960 NM_205846 BC012033 NM_138492	1631385	-	NM_001080516	1669027	-	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	1732668	+	AK292477|KCTD16|57528|potassium channel tetramerisation domain containing 16##CR749266|KCTD16|57528|potassium channel tetramerisation domain containing 16##NM_020768|KCTD16|57528|potassium channel tetramerisation domain containing 16##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC028175|PRELID2|153768|PRELI domain containing 2##AK095695|PRELID2|153768|PRELI domain containing 2##AK125215|PRELID2|153768|PRELI domain containing 2##NM_182960|PRELID2|153768|PRELI domain containing 2##NM_205846|PRELID2|153768|PRELI domain containing 2##BC012033|PRELID2|153768|PRELI domain containing 2##NM_138492|PRELID2|153768|PRELI domain containing 2##NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2	0.509655	CTCF.p2:-9:0.510
chr12	125279687	125279868	reg1017384.p1	7.788	+	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	-227702	-	TSC_hg19_v1_chr12_-_125002875 BC033087	-276918	-	AK126577 NM_181709	-506068	+	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	68528	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	68600	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	68696	-	AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr8	102237893	102237995	reg1017071.p2	7.788	+	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	-19990	-	TSC_hg19_v1_chr8_-_102217877 NM_001042511	-20068	-	BC035233 TSC_hg19_v1_chr8_-_102217845 BC015925 AF125099 AF275802 AF275809 AK290477 BC068524	-20251	-	TSC_hg19_v1_chr8_+_102504667 NM_024915 AK296817 AK310221	266721	+	TSC_hg19_v1_chr8_+_102504840 AK023844 AK292853 BC069618 BC069633 BC069638 BC129822 BC129823	266966	+	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	565239	-	NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706##NM_001042511|ZNF706|51123|zinc finger protein 706##BC035233|ZNF706|51123|zinc finger protein 706##BC015925|ZNF706|51123|zinc finger protein 706##AF125099|ZNF706|51123|zinc finger protein 706##AF275802|ZNF706|51123|zinc finger protein 706##AF275809|ZNF706|51123|zinc finger protein 706##AK290477|ZNF706|51123|zinc finger protein 706##BC068524|ZNF706|51123|zinc finger protein 706##NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta	0.235983	CTCF.p2:-1:0.236
chr1	110602822	110602957	reg1020438.p1	7.787	+	AK291059 TSC_hg19_v1_chr1_+_110577249 AL834196 AB051548 AB463038	-25636	+	BC094786 TSC_hg19_v1_chr1_+_110577243	-25647	+	TSC_hg19_v1_chr1_+_110577229 BC119814 BC121793 NM_033088	-25660	+	AF008203 BC112007 BC113428 NM_006492	10388	-	AK098556 NM_203412 BC058929	52186	+	NM_001010898 AK289982 TSC_hg19_v1_chr1_+_110693135	90245	+	AK291059|FAM40A|85369|family with sequence similarity 40, member A##AL834196|FAM40A|85369|family with sequence similarity 40, member A##AB051548|FAM40A|85369|family with sequence similarity 40, member A##BC094786|FAM40A|85369|family with sequence similarity 40, member A##BC119814|FAM40A|85369|family with sequence similarity 40, member A##BC121793|FAM40A|85369|family with sequence similarity 40, member A##NM_033088|FAM40A|85369|family with sequence similarity 40, member A##AF008203|ALX3|257|ALX homeobox 3##BC112007|ALX3|257|ALX homeobox 3##BC113428|ALX3|257|ALX homeobox 3##NM_006492|ALX3|257|ALX homeobox 3##AK098556|UBL4B|164153|ubiquitin-like 4B##NM_203412|UBL4B|164153|ubiquitin-like 4B##BC058929|UBL4B|164153|ubiquitin-like 4B##NM_001010898|SLC6A17|388662|solute carrier family 6, member 17##AK289982|SLC6A17|388662|solute carrier family 6, member 17	0.995129	CTCF.p2:-3:0.995
chr12	27192517	27192621	reg1014486.p1	7.787	+	TSC_hg19_v1_chr12_+_27175501 U46837 U52960 AB463863 EU446930 AK311838 CR456999	-17054	+	AK309064 BC008380 NM_004264 TSC_hg19_v1_chr12_+_27175482	-17087	+	TSC_hg19_v1_chr12_-_27167332 NM_016551	-25234	-	NM_001080406	42885	-	NM_015000 BC028603 TSC_hg19_v1_chr12_+_27397168	204555	+	TSC_hg19_v1_chr12_+_27397187 AK291055	204618	+	U46837|MED21|9412|mediator complex subunit 21##U52960|MED21|9412|mediator complex subunit 21##EU446930|MED21|9412|mediator complex subunit 21##AK311838|MED21|9412|mediator complex subunit 21##CR456999|MED21|9412|mediator complex subunit 21##AK309064|MED21|9412|mediator complex subunit 21##BC008380|MED21|9412|mediator complex subunit 21##NM_004264|MED21|9412|mediator complex subunit 21##NM_016551|TM7SF3|51768|transmembrane 7 superfamily member 3##NM_001080406|C12orf71|728858|chromosome 12 open reading frame 71##NM_015000|STK38L|23012|serine/threonine kinase 38 like##BC028603|STK38L|23012|serine/threonine kinase 38 like##AK291055|STK38L|23012|serine/threonine kinase 38 like	0.987591	CTCF.p2:-8:0.988
chr15	75339516	75339697	reg1013931.p1	7.787	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-23625	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-23678	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-51699	+	AK128205 TSC_hg19_v1_chr15_+_75491259	151640	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	154606	+	BC110367 TSC_hg19_v1_chr15_+_75494233	154627	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.012638	
chr4	119585938	119586054	reg1017507.p1	7.787	+	TSC_hg19_v1_chr4_+_119512929 AK024248	-73062	+	TSC_hg19_v1_chr4_-_119273910 AJ001531 BC007761 NM_003619	-312071	-	TSC_hg19_v1_chr4_+_119199912 BC017993 BC039555	-386079	+	TSC_hg19_v1_chr4_+_119606557 AK055555 AB046847 BC006565 BC007449 NM_020961 AB384254 CU675451	20615	+	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	171231	-	TSC_hg19_v1_chr4_-_119757290 NM_014822	171345	-	AK024248|LOC729218|729218|uncharacterized LOC729218##AJ001531|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC007761|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##NM_003619|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC017993|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##BC039555|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##AK055555|METTL14|57721|methyltransferase like 14##AB046847|METTL14|57721|methyltransferase like 14##BC006565|METTL14|57721|methyltransferase like 14##BC007449|METTL14|57721|methyltransferase like 14##NM_020961|METTL14|57721|methyltransferase like 14##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##NM_014822|SEC24D|9871|SEC24 family, member D (S. cerevisiae)	0.987976	CTCF.p2:0:0.988
chr5	101014415	101014536	reg1017443.p1	7.787	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-775547	-	AF529367 TSC_hg19_v1_chr5_+_99871306	-1143205	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-1143402	+	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	617633	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	820158	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	1187055	+	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase	0.882755	CTCF.p2:23:0.883
chr5	141524999	141525153	reg1019884.p1	7.787	+	TSC_hg19_v1_chr5_+_141488389 AB097010 AB097037 BC004317	-36666	+	AK075524 TSC_hg19_v1_chr5_+_141488384	-36692	+	TSC_hg19_v1_chr5_+_141488343 NM_030571 AK315481 AY192728	-36728	+	BC125095 BC125096 TSC_hg19_v1_chr5_-_141704555 AF227516 AF227517	179444	-	TSC_hg19_v1_chr5_-_141704587 AK096464 NM_001127496 NM_030964	179558	-	S67291 S67292 S67294 AB528663 X65778 X65779 M13361 NM_033137 X51943	468632	-	AB097010|NDFIP1|80762|Nedd4 family interacting protein 1##AB097037|NDFIP1|80762|Nedd4 family interacting protein 1##BC004317|NDFIP1|80762|Nedd4 family interacting protein 1##AK075524|NDFIP1|80762|Nedd4 family interacting protein 1##NM_030571|NDFIP1|80762|Nedd4 family interacting protein 1##AK315481|NDFIP1|80762|Nedd4 family interacting protein 1##AY192728|NDFIP1|80762|Nedd4 family interacting protein 1##BC125095|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125096|SPRY4|81848|sprouty homolog 4 (Drosophila)##AF227516|SPRY4|81848|sprouty homolog 4 (Drosophila)##AK096464|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_001127496|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_030964|SPRY4|81848|sprouty homolog 4 (Drosophila)##S67291|FGF1|2246|fibroblast growth factor 1 (acidic)##S67292|FGF1|2246|fibroblast growth factor 1 (acidic)##S67294|FGF1|2246|fibroblast growth factor 1 (acidic)##X65778|FGF1|2246|fibroblast growth factor 1 (acidic)##X65779|FGF1|2246|fibroblast growth factor 1 (acidic)##M13361|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)##X51943|FGF1|2246|fibroblast growth factor 1 (acidic)	0.964471	CTCF.p2:2:0.964
chr5	177547998	177548144	reg1017323.p1	7.787	+	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	-7443	+	TSC_hg19_v1_chr5_+_177482580 AB055766	-65493	+	AF076215 NM_006261	-124829	-	TSC_hg19_v1_chr5_+_177558014 AK093481 AK094065 AX748156 AX748436 AK125337	9940	+	TSC_hg19_v1_chr5_+_177558026 BC009911 DQ494789 NM_022762	9961	+	CR457238 AF401219 TSC_hg19_v1_chr5_-_177580868 AK000486 BC000009 AF161404 AJ293309 BC006387	32786	-	BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3##AB055766|RPL19|6143|ribosomal protein L19##AF076215|PROP1|5626|PROP paired-like homeobox 1##NM_006261|PROP1|5626|PROP paired-like homeobox 1##AK093481|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK094065|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK125337|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##BC009911|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##DQ494789|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##NM_022762|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##CR457238|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AF401219|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AK000486|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##BC000009|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AF161404|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AJ293309|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##BC006387|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)	0.981818	CTCF.p2:-12:0.982
chr8	39185040	39185157	reg1019167.p1	7.787	+	NM_145004 AK300148 AY172952 AY358739 AK313864 BC026169 BC030698 BC034975 AK122608 BC028702 BC030014 BC026085 DQ890910 DQ894061 CU693126	-219928	+	TSC_hg19_v1_chr8_+_38854524 BC126406 BC143923 BC143924 AF495383	-330552	+	TSC_hg19_v1_chr8_+_38854491 BC027996 NM_003816 U41766	-330622	+	NM_001190956 NM_014237 AK313961 AY358321 BC070279 BC034624 CU687082 AJ133004 BC121045 BC121046 AK225744	257019	+	X99374 CU687896 CU689996 DQ891615 DQ894807 AJ133005 U52370 BC034957 BC064547 AK301734 U38805 NM_001464	510642	-	NM_002164 AK313259 BC027882 X17668 AY221100 CU693308 JF772862	586286	+	NM_145004|ADAM32|203102|ADAM metallopeptidase domain 32##AK300148|ADAM32|203102|ADAM metallopeptidase domain 32##AY172952|ADAM32|203102|ADAM metallopeptidase domain 32##AY358739|ADAM32|203102|ADAM metallopeptidase domain 32##AK313864|ADAM32|203102|ADAM metallopeptidase domain 32##BC026169|ADAM32|203102|ADAM metallopeptidase domain 32##BC030698|ADAM32|203102|ADAM metallopeptidase domain 32##BC034975|ADAM32|203102|ADAM metallopeptidase domain 32##AK122608|ADAM32|203102|ADAM metallopeptidase domain 32##BC028702|ADAM32|203102|ADAM metallopeptidase domain 32##BC030014|ADAM32|203102|ADAM metallopeptidase domain 32##BC026085|ADAM32|203102|ADAM metallopeptidase domain 32##DQ890910|ADAM32|203102|ADAM metallopeptidase domain 32##DQ894061|ADAM32|203102|ADAM metallopeptidase domain 32##BC126406|ADAM9|8754|ADAM metallopeptidase domain 9##BC143923|ADAM9|8754|ADAM metallopeptidase domain 9##BC143924|ADAM9|8754|ADAM metallopeptidase domain 9##AF495383|ADAM9|8754|ADAM metallopeptidase domain 9##BC027996|ADAM9|8754|ADAM metallopeptidase domain 9##NM_003816|ADAM9|8754|ADAM metallopeptidase domain 9##U41766|ADAM9|8754|ADAM metallopeptidase domain 9##NM_001190956|ADAM18|8749|ADAM metallopeptidase domain 18##NM_014237|ADAM18|8749|ADAM metallopeptidase domain 18##AK313961|ADAM18|8749|ADAM metallopeptidase domain 18##AY358321|ADAM18|8749|ADAM metallopeptidase domain 18##BC070279|ADAM18|8749|ADAM metallopeptidase domain 18##BC034624|ADAM18|8749|ADAM metallopeptidase domain 18##AJ133004|ADAM18|8749|ADAM metallopeptidase domain 18##BC121045|ADAM18|8749|ADAM metallopeptidase domain 18##BC121046|ADAM18|8749|ADAM metallopeptidase domain 18##AK225744|ADAM18|8749|ADAM metallopeptidase domain 18##X99374|ADAM2|2515|ADAM metallopeptidase domain 2##DQ891615|ADAM2|2515|ADAM metallopeptidase domain 2##DQ894807|ADAM2|2515|ADAM metallopeptidase domain 2##AJ133005|ADAM2|2515|ADAM metallopeptidase domain 2##U52370|ADAM2|2515|ADAM metallopeptidase domain 2##BC034957|ADAM2|2515|ADAM metallopeptidase domain 2##BC064547|ADAM2|2515|ADAM metallopeptidase domain 2##AK301734|ADAM2|2515|ADAM metallopeptidase domain 2##U38805|ADAM2|2515|ADAM metallopeptidase domain 2##NM_001464|ADAM2|2515|ADAM metallopeptidase domain 2##NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1##AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1##X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1##AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1##JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1	0.896818	CTCF.p2:0:0.897
chr10	120560569	120560677	reg1017186.p2	7.786	+	TSC_hg19_v1_chr10_-_120514701 AY743663 BC038294 NM_153810	-45906	-	TSC_hg19_v1_chr10_-_120514483 AJ544771 AK097728	-46112	-	CU691560 TSC_hg19_v1_chr10_-_120514298	-46336	-	AF458985 NM_199461 AF275269	228626	+	BC114429 BC114429 TSC_hg19_v1_chr10_-_120840295 U58046 U58046 BC054342 BC033769	279645	-	TSC_hg19_v1_chr10_-_120840299 U78311 U78311	279676	-	AY743663|C10orf46|143384|chromosome 10 open reading frame 46##BC038294|C10orf46|143384|chromosome 10 open reading frame 46##NM_153810|C10orf46|143384|chromosome 10 open reading frame 46##AJ544771|C10orf46|143384|chromosome 10 open reading frame 46##AK097728|C10orf46|143384|chromosome 10 open reading frame 46##AF458985|NANOS1|340719|nanos homolog 1 (Drosophila)##NM_199461|NANOS1|340719|nanos homolog 1 (Drosophila)##AF275269|NANOS1|340719|nanos homolog 1 (Drosophila)##BC114429|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##BC114429|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##U58046|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##U58046|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##BC054342|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##BC033769|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##U78311|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##U78311|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A	0.707814	CTCF.p2:12:0.334	CTCF.p2:13:0.374
chr15	91593178	91593287	reg1017601.p1	7.786	+	BC016445 TSC_hg19_v1_chr15_-_91565785 AK074863 AF201694 AK315721 AF308803 AK027754 AK300608 AK293688 AK308480 NM_018668	-27462	-	CU677627 TSC_hg19_v1_chr15_-_91565525	-27730	-	AF044588 BC003138 TSC_hg19_v1_chr15_-_91537766 AK297117 AK304094 BC005140 AK312600 NM_003981 NM_199413 NM_199414	-55466	-	NM_001167580 TSC_hg19_v1_chr15_+_91643185 AK294902	49977	+	TSC_hg19_v1_chr15_+_91643505 NM_014848 BC030011	50254	+	TSC_hg19_v1_chr15_+_91643558 AF052188	50327	+	BC016445|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK074863|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AF201694|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK315721|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AF308803|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK027754|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK300608|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK293688|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK308480|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##NM_018668|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AF044588|PRC1|9055|protein regulator of cytokinesis 1##BC003138|PRC1|9055|protein regulator of cytokinesis 1##AK297117|PRC1|9055|protein regulator of cytokinesis 1##AK304094|PRC1|9055|protein regulator of cytokinesis 1##BC005140|PRC1|9055|protein regulator of cytokinesis 1##AK312600|PRC1|9055|protein regulator of cytokinesis 1##NM_003981|PRC1|9055|protein regulator of cytokinesis 1##NM_199413|PRC1|9055|protein regulator of cytokinesis 1##NM_199414|PRC1|9055|protein regulator of cytokinesis 1##NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B##AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_014848|SV2B|9899|synaptic vesicle glycoprotein 2B##BC030011|SV2B|9899|synaptic vesicle glycoprotein 2B##AF052188|SV2B|9899|synaptic vesicle glycoprotein 2B	0.987466	CTCF.p2:15:0.987
chr3	112250263	112250415	reg1017868.p1	7.785	+	AK292692 NM_001085357 NM_181780	-31944	-	AL832529 AK129797 AK293399 BC031103 TSC_hg19_v1_chr3_+_112052024 AK074972	-198315	+	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	-198381	+	AK307432 AB079384 CU692886 DQ893424 DQ896774 AF202092 TSC_hg19_v1_chr3_-_112280499 BC024221 NM_022488 AL137515	30103	-	TSC_hg19_v1_chr3_-_112280761 BC002830	30422	-	TSC_hg19_v1_chr3_-_112280783 AK308919	30443	-	AK292692|BTLA|151888|B and T lymphocyte associated##NM_001085357|BTLA|151888|B and T lymphocyte associated##NM_181780|BTLA|151888|B and T lymphocyte associated##AL832529|CD200|4345|CD200 molecule##AK129797|CD200|4345|CD200 molecule##AK293399|CD200|4345|CD200 molecule##BC031103|CD200|4345|CD200 molecule##AK074972|CD200|4345|CD200 molecule##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule##AK307432|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AB079384|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##DQ893424|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##DQ896774|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AF202092|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##BC024221|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##NM_022488|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AL137515|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##BC002830|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AK308919|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)	0.976125	CTCF.p2:28:0.976
chr3	169684396	169684534	reg1018034.p2	7.785	+	BX648991 BX648534 BX648989 BX537903 NM_182610	-55045	+	HQ258307 BC117401 BC143569 BC143582 AY358138 AK097338 NM_024727 AK026912	-96808	-	NM_001080460	-144756	+	TSC_hg19_v1_chr3_+_169684598 NM_003262 AK294504 BC003677 BC007040 BC012035 BX648539 D87127 U93239 EU832302 EU832386	123	+	TSC_hg19_v1_chr3_+_169755748 NM_014373	71289	+	TSC_hg19_v1_chr3_+_169755782 BC000181	71325	+	BX648991|SAMD7|344658|sterile alpha motif domain containing 7##BX648534|SAMD7|344658|sterile alpha motif domain containing 7##BX648989|SAMD7|344658|sterile alpha motif domain containing 7##BX537903|SAMD7|344658|sterile alpha motif domain containing 7##NM_182610|SAMD7|344658|sterile alpha motif domain containing 7##HQ258307|LRRC31|79782|leucine rich repeat containing 31##BC117401|LRRC31|79782|leucine rich repeat containing 31##BC143569|LRRC31|79782|leucine rich repeat containing 31##BC143582|LRRC31|79782|leucine rich repeat containing 31##AY358138|LRRC31|79782|leucine rich repeat containing 31##AK097338|LRRC31|79782|leucine rich repeat containing 31##NM_024727|LRRC31|79782|leucine rich repeat containing 31##AK026912|LRRC31|79782|leucine rich repeat containing 31##NM_001080460|LRRIQ4|344657|leucine-rich repeats and IQ motif containing 4##NM_003262|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC003677|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC007040|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC012035|SEC62|7095|SEC62 homolog (S. cerevisiae)##BX648539|SEC62|7095|SEC62 homolog (S. cerevisiae)##D87127|SEC62|7095|SEC62 homolog (S. cerevisiae)##U93239|SEC62|7095|SEC62 homolog (S. cerevisiae)##EU832302|SEC62|7095|SEC62 homolog (S. cerevisiae)##EU832386|SEC62|7095|SEC62 homolog (S. cerevisiae)##NM_014373|GPR160|26996|G protein-coupled receptor 160##BC000181|GPR160|26996|G protein-coupled receptor 160	0.028539	
chr7	82440094	82440232	reg1021741.p1	7.785	+	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	-367083	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	-367317	-	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-1040789	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	351706	-	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	352073	-	AK303925 NM_001178129	830583	-	NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	0.955891	CTCF.p2:-1:0.956
chr8	56843257	56843395	reg1015705.p2	7.785	+	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-50806	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	-50931	+	TSC_hg19_v1_chr8_+_56792383 M16038 NM_001111097 NM_002350 BC126456 BC126458	-50961	+	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	143760	-	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	183214	-	TSC_hg19_v1_chr8_-_57123833 U65002	280509	-	AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M16038|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_001111097|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_002350|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126456|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126458|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1	0.89892	CTCF.p2:6:0.899
chr15	21233456	21233591	reg1019384.p1	7.784	+	NM_207355 BC066981	-161545	-	NM_001145004	-486410	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-522086	-	NM_207355 BC066981	849615	-	BC136985 NM_001004719	1134954	+	BC136597 BC136598 NM_001005241 DQ786223	1148922	+	NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4	0.842307	CTCF.p2:16:0.842
chr6_mann_hap4	2513220	2513355	reg1019838.p1	7.784	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr7	128065942	128066063	reg1018105.p1	7.784	+	TSC_hg19_v1_chr7_-_128050037 AK092452 BC033622 AK054667 AK122994 NM_000883 NM_001102605 NM_001142576 NM_183243	-15965	-	AK131294 TSC_hg19_v1_chr7_-_128049984 CR933672	-16022	-	AK054640 AK293413 AK297943 TSC_hg19_v1_chr7_-_128046013 NM_001142573 NM_001142574 NM_001142575	-19985	-	TSC_hg19_v1_chr7_+_128095931 NM_001098786 NM_013332 AF144755 AK024729 AK222583 BC008573 BC001863 BC093742 BC112183	29964	+	NM_018396 TSC_hg19_v1_chr7_+_128116813 AK302775 BC107586 AK002212 BC064929 BC121115 BC121116 AK299960	50835	+	BC066973 NM_001012454 NM_001128926 BC105729 BC105730 BC105731 BC047310	246344	+	AK092452|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC033622|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054667|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK122994|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_000883|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001102605|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142576|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_183243|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK131294|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##CR933672|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated##AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_018396|METTL2B|55798|methyltransferase like 2B##AK302775|METTL2B|55798|methyltransferase like 2B##BC107586|METTL2B|55798|methyltransferase like 2B##AK002212|METTL2B|55798|methyltransferase like 2B##BC064929|METTL2B|55798|methyltransferase like 2B##BC121115|METTL2B|55798|methyltransferase like 2B##BC121116|METTL2B|55798|methyltransferase like 2B##AK299960|METTL2B|55798|methyltransferase like 2B##BC066973|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001012454|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001128926|FAM71F2|346653|family with sequence similarity 71, member F2##BC105729|FAM71F2|346653|family with sequence similarity 71, member F2##BC105730|FAM71F2|346653|family with sequence similarity 71, member F2##BC105731|FAM71F2|346653|family with sequence similarity 71, member F2##BC047310|FAM71F2|346653|family with sequence similarity 71, member F2	0.975484	CTCF.p2:14:0.975
chrX	154314809	154314953	reg1017629.p1	7.784	+	TSC_hg19_v1_chrX_+_154299784 AK310286 X64643 AK299194 AK313544 BC002999 BC006540 AB462964 AM392829 AY438030 CU678330 AK298886	-15091	+	TSC_hg19_v1_chrX_+_154299709 NM_001018055 NM_001242640 NM_024332	-15174	+	TSC_hg19_v1_chrX_-_154299405 BC002600 X64644 NM_001018024 NM_001018025	-15434	-	NM_003372 TSC_hg19_v1_chrX_+_154444736 BC009570 AK313420 BC046094 Y17394 BC040002 AB464347 BT019604 CU692296	129848	+	AL834460 TSC_hg19_v1_chrX_-_154493774 AY052478 NM_171998 BC009714	178923	-	AB463493 AM393055 AY191592 DQ892014 DQ895204 BC022305 BC005367 AK292785 Y12696 NM_001289	248979	-	AK310286|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##X64643|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK299194|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK313544|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC002999|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC006540|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AM392829|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AY438030|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK298886|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_001018055|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_001242640|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_024332|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##NM_001018025|MTCP1|4515|mature T-cell proliferation 1##NM_003372|VBP1|7411|von Hippel-Lindau binding protein 1##BC009570|VBP1|7411|von Hippel-Lindau binding protein 1##AK313420|VBP1|7411|von Hippel-Lindau binding protein 1##BC046094|VBP1|7411|von Hippel-Lindau binding protein 1##Y17394|VBP1|7411|von Hippel-Lindau binding protein 1##BC040002|VBP1|7411|von Hippel-Lindau binding protein 1##BT019604|VBP1|7411|von Hippel-Lindau binding protein 1##AL834460|RAB39B|116442|RAB39B, member RAS oncogene family##AY052478|RAB39B|116442|RAB39B, member RAS oncogene family##NM_171998|RAB39B|116442|RAB39B, member RAS oncogene family##BC009714|RAB39B|116442|RAB39B, member RAS oncogene family##AM393055|CLIC2|1193|chloride intracellular channel 2##AY191592|CLIC2|1193|chloride intracellular channel 2##DQ892014|CLIC2|1193|chloride intracellular channel 2##DQ895204|CLIC2|1193|chloride intracellular channel 2##BC022305|CLIC2|1193|chloride intracellular channel 2##BC005367|CLIC2|1193|chloride intracellular channel 2##AK292785|CLIC2|1193|chloride intracellular channel 2##Y12696|CLIC2|1193|chloride intracellular channel 2##NM_001289|CLIC2|1193|chloride intracellular channel 2	0.996314	CTCF.p2:35:0.996
chr12	50156890	50157055	reg1019336.p1	7.783	+	BC036203 TSC_hg19_v1_chr12_+_50135987	-21001	+	NM_001098576 AK124849	-21380	+	TSC_hg19_v1_chr12_+_50135353 AK312238 BC000916 AF033095	-21614	+	TSC_hg19_v1_chr12_+_50156978 AK026605	56	+	TSC_hg19_v1_chr12_-_50222197 NM_001037806	65227	-	CU690986 BC053560 BC040957 AK292194 NM_181708	79917	-	BC036203|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##NM_001098576|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK124849|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK312238|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##BC000916|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AF033095|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##NM_001037806|NCKAP5L|57701|NCK-associated protein 5-like##BC053560|BCDIN3D|144233|BCDIN3 domain containing##BC040957|BCDIN3D|144233|BCDIN3 domain containing##AK292194|BCDIN3D|144233|BCDIN3 domain containing##NM_181708|BCDIN3D|144233|BCDIN3 domain containing	0.99946	CTCF.p2:1:0.999
chr19	48817752	48817864	reg1017187.p1	7.783	+	AK075062 NM_153608	-43155	+	TSC_hg19_v1_chr19_-_48759141 BC056891 BC034564 BC046136 NM_001184902 NM_001184904	-58637	-	AK125548 TSC_hg19_v1_chr19_+_48758936 BC060888 BC008448 BC033836	-58859	+	BC007730 NM_144577	5523	-	TSC_hg19_v1_chr19_-_48825152 AK128144	7362	-	TSC_hg19_v1_chr19_+_48828629 NM_001425 U87947	10832	+	AK075062|ZNF114|163071|zinc finger protein 114##NM_153608|ZNF114|163071|zinc finger protein 114##BC056891|CARD8|22900|caspase recruitment domain family, member 8##BC034564|CARD8|22900|caspase recruitment domain family, member 8##BC046136|CARD8|22900|caspase recruitment domain family, member 8##NM_001184902|CARD8|22900|caspase recruitment domain family, member 8##NM_001184904|CARD8|22900|caspase recruitment domain family, member 8##AK125548|LOC100505812|100505812|uncharacterized LOC100505812##BC060888|LOC100505812|100505812|uncharacterized LOC100505812##BC007730|CCDC114|93233|coiled-coil domain containing 114##NM_144577|CCDC114|93233|coiled-coil domain containing 114##AK128144|CCDC114|93233|coiled-coil domain containing 114##NM_001425|EMP3|2014|epithelial membrane protein 3##U87947|EMP3|2014|epithelial membrane protein 3	0.05855	
chr2	217529314	217529435	reg1015286.p1	7.783	+	TSC_hg19_v1_chr2_+_217498216 DQ893450 EU176752	-31076	+	TSC_hg19_v1_chr2_+_217498142 NM_000597 X16302 BC071967 AB209509 BC004312 BC009902 BC012769 M35410	-31238	+	NM_000998 TSC_hg19_v1_chr2_+_217363566 AK289472 BC016748 BC067789 L22154 AK023419 AK291857 BC063476 L06499 BC014262 BC082239 BC047872	-165821	+	L27560 AF147308 TSC_hg19_v1_chr2_-_217540846	11410	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	30192	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	30886	-	DQ893450|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##EU176752|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##NM_000998|RPL37A|6168|ribosomal protein L37a##AK289472|RPL37A|6168|ribosomal protein L37a##BC016748|RPL37A|6168|ribosomal protein L37a##BC067789|RPL37A|6168|ribosomal protein L37a##L22154|RPL37A|6168|ribosomal protein L37a##AK023419|RPL37A|6168|ribosomal protein L37a##AK291857|RPL37A|6168|ribosomal protein L37a##BC063476|RPL37A|6168|ribosomal protein L37a##L06499|RPL37A|6168|ribosomal protein L37a##BC014262|RPL37A|6168|ribosomal protein L37a##BC082239|RPL37A|6168|ribosomal protein L37a##BC047872|RPL37A|6168|ribosomal protein L37a##L27560|IGFBP5|3488|insulin-like growth factor binding protein 5##AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5	0.879008	CTCF.p2:15:0.879
chrX	70884145	70884265	reg1016565.p2	7.783	+	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	-45873	-	NM_052957	-86332	+	TSC_hg19_v1_chrX_+_70765496 AL050366	-118683	+	NM_001145139 NM_001145140	53929	-	NM_001145139 NM_001145140	98934	+	TSC_hg19_v1_chrX_+_71130694 NM_001013627	246573	+	AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_052957|ACRC|93953|acidic repeat containing##AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001013627|NHSL2|340527|NHS-like 2	0.983363	CTCF.p2:3:0.983
chr11	113677252	113677395	reg1019261.p1	7.782	+	TSC_hg19_v1_chr11_+_113659972 AK093353 AX748073	-17375	+	NM_001101389	-26806	+	TSC_hg19_v1_chr11_-_113644486 NM_004724	-32839	-	TSC_hg19_v1_chr11_-_113746251 CU688104 AF266283 BC065928 AK304376 NM_020886 AK304770 AK097623	68968	-	AK314268 NM_006028 AF169255 AF080582 AB463385	98263	+	AK304630 NM_000869 NM_213621 D49394 AK313896 BC004453 BC002354 AJ003078 AJ003079 AJ003080 BT007204 AB587356 AF498984 CU677922 DQ892003 DQ895193	168598	+	AK093353|LOC390251|390251|SH3-domain GRB2-like 1 pseudogene##NM_001101389|CLDN25|644672|claudin 25##NM_004724|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AF266283|USP28|57646|ubiquitin specific peptidase 28##BC065928|USP28|57646|ubiquitin specific peptidase 28##AK304376|USP28|57646|ubiquitin specific peptidase 28##NM_020886|USP28|57646|ubiquitin specific peptidase 28##AK304770|USP28|57646|ubiquitin specific peptidase 28##AK097623|USP28|57646|ubiquitin specific peptidase 28##AK314268|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##NM_006028|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##AF169255|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##AF080582|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##AK304630|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##NM_000869|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##NM_213621|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##D49394|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AK313896|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##BC004453|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##BC002354|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AJ003078|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AJ003079|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AJ003080|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##BT007204|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AF498984|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##DQ892003|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##DQ895193|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A	0.996693	CTCF.p2:-7:0.997
chr2	175850509	175850661	reg1018195.p1	7.782	+	AK055060 NM_001206602	-138275	-	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	-221416	-	TSC_hg19_v1_chr2_+_175584527 DQ895855	-266007	+	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	19428	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	182310	-	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	195719	-	AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1##AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##DQ895855|H3F3A|3020|H3 histone, family 3A##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)	0.936832	CTCF.p2:32:0.937
chr22	30822593	30822707	reg1017882.p2	7.782	+	NM_001003704 NM_016498 AF151076 AF060924 BC030989 AK026104 BC009300 TSC_hg19_v1_chr22_+_30821776 BC001608 BC014446 CR456345 BC046132 AB528187 CU013056 CU013344	-911	+	NM_001204204 NM_012429 NM_033382 AL096881 TSC_hg19_v1_chr22_+_30793006 AK223587 BC048337 AK314390 AK091402 BC058915 AB033012 CR456571 AK303751 AK296540 CU013170 CU013458	-29635	+	NM_001017981 AB464176	-39348	-	AY158086 BC069641 BC101001 BC101002 BC101003 BC101004 AK298079 AK131358 AY240872 NM_174975	45338	-	AY158085 FJ824055 BC139912 BC136358 BC136359 AK093448 AK092002 AK093418 AX747303 AX748114 NM_001161368 NM_174977	78997	-	NM_001193336	120018	-	NM_001003704|MTFP1|51537|mitochondrial fission process 1##NM_016498|MTFP1|51537|mitochondrial fission process 1##AF151076|MTFP1|51537|mitochondrial fission process 1##AF060924|MTFP1|51537|mitochondrial fission process 1##BC030989|MTFP1|51537|mitochondrial fission process 1##AK026104|MTFP1|51537|mitochondrial fission process 1##BC009300|MTFP1|51537|mitochondrial fission process 1##BC001608|MTFP1|51537|mitochondrial fission process 1##BC014446|MTFP1|51537|mitochondrial fission process 1##CR456345|MTFP1|51537|mitochondrial fission process 1##BC046132|MTFP1|51537|mitochondrial fission process 1##NM_001204204|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_012429|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_033382|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AL096881|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK223587|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##BC048337|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK314390|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK091402|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##BC058915|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AB033012|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CR456571|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK303751|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK296540|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CU013170|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CU013458|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_001017981|RNF215|200312|ring finger protein 215##AY158086|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC069641|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101001|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101002|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101003|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101004|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AK298079|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AK131358|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AY240872|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##NM_174975|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AY158085|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##FJ824055|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##BC139912|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##BC136358|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##BC136359|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##AK093448|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##AK092002|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##AK093418|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##NM_001161368|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##NM_174977|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##NM_001193336|SEC14L6|730005|SEC14-like 6 (S. cerevisiae)	0.573769	CTCF.p2:9:0.574
chr8	142183405	142183527	reg1019463.p1	7.782	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-44729	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-172210	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-537842	-	AK128212 NM_001080431	55206	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	80724	-	NM_005293	193898	-	NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.997523	CTCF.p2:6:0.998
chr11	121526313	121526433	reg1008381.p1	7.781	+	TSC_hg19_v1_chr11_+_121461071 AK294404	-65275	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-203198	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	-203424	+	BC130361 BC130363 AF303179 NM_001001786	460488	-	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	1000174	+	BC070266 AK313578 AF001622 NM_019604	1182856	+	AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule	0.372701	CTCF.p2:-12:0.373
chr16	31967727	31967872	reg1013234.p1	7.781	+	TSC_hg19_v1_chr16_+_31885159 BC036367 BC127088 BC127089 AK292573	-82595	+	AF220492 TSC_hg19_v1_chr16_+_31885131	-82667	+	TSC_hg19_v1_chr16_+_31885114 AK096390	-82683	+	TSC_hg19_v1_chr16_-_32199418 AK300387	231620	-	AB023508 AB023509 BC096700 BC099842 NM_001243722 AK312220 CR541650	296859	+	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	719634	-	BC036367|ZNF267|10308|zinc finger protein 267##BC127088|ZNF267|10308|zinc finger protein 267##BC127089|ZNF267|10308|zinc finger protein 267##AK292573|ZNF267|10308|zinc finger protein 267##AF220492|ZNF267|10308|zinc finger protein 267##AK096390|ZNF267|10308|zinc finger protein 267##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AB023508|TP53TG3|24150|TP53 target 3##AB023509|TP53TG3|24150|TP53 target 3##BC096700|TP53TG3|24150|TP53 target 3##BC099842|TP53TG3|24150|TP53 target 3##NM_001243722|LOC729264|729264|TP53-target gene 3 protein-like##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3	4.550749	CTCF.p2:-23:0.623	CTCF.p2:34:0.973	CTCF.p2:-63:0.978	CTCF.p2:72:0.978	CTCF.p2:-102:0.944
chr18	72608473	72608613	reg1019699.p1	7.781	+	NM_001146189 NM_001146190 NM_017757	-265625	+	TSC_hg19_v1_chr18_+_72265126 AK056288	-343412	+	TSC_hg19_v1_chr18_-_72265072 BC036588	-343483	-	TSC_hg19_v1_chr18_-_72920993 CU687330 CU689738	312458	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	312569	-	BC018081 NM_175907 TSC_hg19_v1_chr18_-_72921324	312762	-	NM_001146189|ZNF407|55628|zinc finger protein 407##NM_001146190|ZNF407|55628|zinc finger protein 407##NM_017757|ZNF407|55628|zinc finger protein 407##AK056288|ZNF407|55628|zinc finger protein 407##BC036588|LOC400657|400657|uncharacterized LOC400657##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	0.0	
chr11	11422530	11422625	reg1017886.p1	7.780	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-542791	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-543059	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-591780	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	221001	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	440439	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	440914	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.536157	CTCF.p2:8:0.536
chr16	67899391	67899490	reg1018148.p2	7.780	+	AK056097 NM_025082	-18080	-	TSC_hg19_v1_chr16_+_67880835 NM_005796 X07315 BC002348 AK293739 AK311822	-18631	+	L10378 L10379 TSC_hg19_v1_chr16_+_67876463 DQ892600 DQ895831 CU680258 EF036502	-22958	+	TSC_hg19_v1_chr16_+_67906967 NM_014329 AK128582	7505	+	TSC_hg19_v1_chr16_+_67907026 BC043616 BC064567 L26339	7586	+	TSC_hg19_v1_chr16_+_67907132 AK291049 AK302563	7758	+	AK056097|CENPT|80152|centromere protein T##NM_025082|CENPT|80152|centromere protein T##NM_005796|NUTF2|10204|nuclear transport factor 2##X07315|NUTF2|10204|nuclear transport factor 2##BC002348|NUTF2|10204|nuclear transport factor 2##AK293739|NUTF2|10204|nuclear transport factor 2##AK311822|NUTF2|10204|nuclear transport factor 2##L10378|THAP11|57215|THAP domain containing 11##L10379|THAP11|57215|THAP domain containing 11##DQ892600|THAP11|57215|THAP domain containing 11##DQ895831|THAP11|57215|THAP domain containing 11##EF036502|THAP11|57215|THAP domain containing 11##NM_014329|EDC4|23644|enhancer of mRNA decapping 4##AK128582|EDC4|23644|enhancer of mRNA decapping 4##BC043616|EDC4|23644|enhancer of mRNA decapping 4##BC064567|EDC4|23644|enhancer of mRNA decapping 4##L26339|EDC4|23644|enhancer of mRNA decapping 4##AK291049|EDC4|23644|enhancer of mRNA decapping 4##AK302563|EDC4|23644|enhancer of mRNA decapping 4	0.999079	CTCF.p2:6:0.999
chr17	34746536	34746660	reg1018668.p1	7.780	+	AY766447 AY766449 AY766450 AY766455 AY766456 BC070310 NM_001001435 NM_207007 BC071718 BC130456 BC130458 BC144393 BC144394 HQ258694	-106530	+	D63785 BT006783 BC146914 BC146919 BC147008 BC147013 BC007783 X52149 BC027888 BC063472 NM_001001437 NM_021006 BC107710	-120919	-	BC033670 AL136860 AK301823 BC071680 AK225985 AK292308 NM_001001418	-154604	-	BC047739 AL136860 AK301823 BC071680 AK225985 AK302064 NM_001123392	10416	-	BC033670 BC047739 AK225985 AK302064 BC075809 AK292344 NM_001040282	61464	-	NM_004773 AF400652 BC105608 BC017931 AK290858 AK310022 AB464422 AK308583 L40410 TSC_hg19_v1_chr17_+_34842662	95969	+	AY766447|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766449|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766450|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766455|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##AY766456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC070310|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_001001435|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##NM_207007|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##BC130456|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC130458|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144393|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##BC144394|CCL4L1|9560|chemokine (C-C motif) ligand 4-like 1##HQ258694|CCL4L2|388372|chemokine (C-C motif) ligand 4-like 2##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BT006783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC146914|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC146919|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147008|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC147013|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##BC007783|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##X52149|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC027888|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC063472|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_001001437|CCL3L3|414062|chemokine (C-C motif) ligand 3-like 3##NM_021006|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC107710|CCL3L1|6349|chemokine (C-C motif) ligand 3-like 1##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK292308|TBC1D3C|414060|TBC1 domain family, member 3C##NM_001001418|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK302064|TBC1D3|729873|TBC1 domain family, member 3##NM_001123392|TBC1D3H|729877|TBC1 domain family, member 3H##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC075809|TBC1D3G|654341|TBC1 domain family, member 3G##AK292344|TBC1D3G|654341|TBC1 domain family, member 3G##NM_001040282|TBC1D3G|654341|TBC1 domain family, member 3G##NM_004773|ZNHIT3|9326|zinc finger, HIT-type containing 3##AF400652|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC105608|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC017931|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK290858|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK310022|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK308583|ZNHIT3|9326|zinc finger, HIT-type containing 3##L40410|ZNHIT3|9326|zinc finger, HIT-type containing 3	0.243231	CTCF.p2:12:0.231
chr3	158031259	158031366	reg1017429.p1	7.780	+	TSC_hg19_v1_chr3_+_157827937 AK300388	-203372	+	TSC_hg19_v1_chr3_+_157827910 AK290334 BC006982 NM_016625 AF208853 BC010357	-203421	+	HQ258019 AJ002367 TSC_hg19_v1_chr3_-_157823847 BC008829 NM_001163678 NM_003030 NM_006884	-207429	-	NM_001130156 NM_001130157 NM_001195432 NM_001195433 NM_001195434 NM_022443 AK056948 AK315402 BC095437 BX647666 AY848700 AY848701 AY848702 BC007045 L49054 AK297488 AK096889	257685	+	TSC_hg19_v1_chr3_+_158362361 AF309777 AF367998 AK000780 NM_024996 BC049210	331017	+	TSC_hg19_v1_chr3_+_158362373 AK315031	331069	+	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1##AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1##NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1##AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1##HQ258019|SHOX2|6474|short stature homeobox 2##AJ002367|SHOX2|6474|short stature homeobox 2##BC008829|SHOX2|6474|short stature homeobox 2##NM_001163678|SHOX2|6474|short stature homeobox 2##NM_003030|SHOX2|6474|short stature homeobox 2##NM_006884|SHOX2|6474|short stature homeobox 2##NM_001130156|MLF1|4291|myeloid leukemia factor 1##NM_001130157|MLF1|4291|myeloid leukemia factor 1##NM_001195432|MLF1|4291|myeloid leukemia factor 1##NM_001195433|MLF1|4291|myeloid leukemia factor 1##NM_001195434|MLF1|4291|myeloid leukemia factor 1##NM_022443|MLF1|4291|myeloid leukemia factor 1##AK056948|MLF1|4291|myeloid leukemia factor 1##AK315402|MLF1|4291|myeloid leukemia factor 1##BC095437|MLF1|4291|myeloid leukemia factor 1##BX647666|MLF1|4291|myeloid leukemia factor 1##AY848700|MLF1|4291|myeloid leukemia factor 1##AY848701|MLF1|4291|myeloid leukemia factor 1##AY848702|MLF1|4291|myeloid leukemia factor 1##BC007045|MLF1|4291|myeloid leukemia factor 1##L49054|MLF1|4291|myeloid leukemia factor 1##AK297488|MLF1|4291|myeloid leukemia factor 1##AK096889|MLF1|4291|myeloid leukemia factor 1##AF309777|GFM1|85476|G elongation factor, mitochondrial 1##AF367998|GFM1|85476|G elongation factor, mitochondrial 1##AK000780|GFM1|85476|G elongation factor, mitochondrial 1##NM_024996|GFM1|85476|G elongation factor, mitochondrial 1##BC049210|GFM1|85476|G elongation factor, mitochondrial 1##AK315031|GFM1|85476|G elongation factor, mitochondrial 1	0.950891	CTCF.p2:6:0.951
chr3	8649339	8649443	reg1017527.p2	7.780	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	-105810	+	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	-105876	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	-106061	-	TSC_hg19_v1_chr3_-_8693765 AB024705 NM_015931 BC052614	44363	-	AK291892 NM_001234 NM_033337 BC069368 AF036365 BC102033 BC102036 BC102037 Y14747 CU686780 AF043101	126134	+	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	161695	-	AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AB024705|C3orf32|51066|chromosome 3 open reading frame 32##NM_015931|C3orf32|51066|chromosome 3 open reading frame 32##BC052614|C3orf32|51066|chromosome 3 open reading frame 32##AK291892|CAV3|859|caveolin 3##NM_001234|CAV3|859|caveolin 3##NM_033337|CAV3|859|caveolin 3##BC069368|CAV3|859|caveolin 3##AF036365|CAV3|859|caveolin 3##BC102033|CAV3|859|caveolin 3##BC102036|CAV3|859|caveolin 3##BC102037|CAV3|859|caveolin 3##Y14747|CAV3|859|caveolin 3##AF043101|CAV3|859|caveolin 3##X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor	0.0	
chr14	29226444	29226595	reg1021521.p1	7.779	+	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	-2159531	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	-3707281	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-4123101	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	9709	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	10394	+	TSC_hg19_v1_chr14_+_29241992 BX248251	15476	+	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23	0.920521	CTCF.p2:-3:0.921
chr1	180485090	180485220	reg1015848.p1	7.778	+	TSC_hg19_v1_chr1_-_180471976 AK314112 NM_032360	-13191	-	NM_033343 AF179849	-285719	+	TSC_hg19_v1_chr1_+_180124047 AB384905	-361099	+	TSC_hg19_v1_chr1_+_180601151 BC028576 NM_001135669 NM_004736	115982	+	AK309750 TSC_hg19_v1_chr1_+_180601157	116004	+	TSC_hg19_v1_chr1_+_180601171 BC041142 AF089744	116013	+	AK314112|ACBD6|84320|acyl-CoA binding domain containing 6##NM_032360|ACBD6|84320|acyl-CoA binding domain containing 6##NM_033343|LHX4|89884|LIM homeobox 4##AF179849|LHX4|89884|LIM homeobox 4##BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AK309750|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##BC041142|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF089744|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	0.96179	CTCF.p2:-13:0.962
chr14	79224808	79224954	reg1017302.p2	7.778	+	AB018286 BC152457 NM_004796	-354789	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-958431	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-997372	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	520823	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	1453023	-	AK292210 NM_000793	1472515	-	AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	0.0	
chr6	104918	105030	reg1017219.p1	7.778	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	187111	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	187523	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	286790	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.996754	CTCF.p2:4:0.997
chr4	668106	668224	reg1016220.p1	7.777	+	BT006922 TSC_hg19_v1_chr4_-_668066 AK000656 BC003679 BC105610 AB028624 D50371 NM_007100	-85	-	TSC_hg19_v1_chr4_-_658000 BC039412	-10178	-	AK311638 TSC_hg19_v1_chr4_-_657444	-10730	-	TSC_hg19_v1_chr4_+_668293 AK125529	110	+	TSC_hg19_v1_chr4_+_668354 BC040050	171	+	L03785 NM_002477	3545	+	BT006922|ATP5I|521|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit E##AK000656|ATP5I|521|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit E##BC003679|ATP5I|521|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit E##BC105610|ATP5I|521|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit E##AB028624|ATP5I|521|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit E##D50371|ATP5I|521|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit E##NM_007100|ATP5I|521|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit E##BC039412|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta##AK125529|MYL5|4636|myosin, light chain 5, regulatory##BC040050|MYL5|4636|myosin, light chain 5, regulatory##L03785|MYL5|4636|myosin, light chain 5, regulatory##NM_002477|MYL5|4636|myosin, light chain 5, regulatory	0.805799	CTCF.p2:13:0.806
chr6	135997171	135997286	reg1015279.p1	7.777	+	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	-178264	+	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	-178343	-	AY133243 TSC_hg19_v1_chr6_-_135818858 DQ090887	-178403	-	AK290582 AB038040 NM_018945 TSC_hg19_v1_chr6_+_136172838 AJ251860 BC070267	175623	+	TSC_hg19_v1_chr6_-_136571414 AK292303 BC063688 AK125758 NM_001099286 NM_138419	574201	-	BC078160 BC063846 TSC_hg19_v1_chr6_-_136610926 BX649160 BC016682	613682	-	BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##AY133243|AHI1|54806|Abelson helper integration site 1##DQ090887|AHI1|54806|Abelson helper integration site 1##AK290582|PDE7B|27115|phosphodiesterase 7B##AB038040|PDE7B|27115|phosphodiesterase 7B##NM_018945|PDE7B|27115|phosphodiesterase 7B##AJ251860|PDE7B|27115|phosphodiesterase 7B##BC070267|PDE7B|27115|phosphodiesterase 7B##AK292303|FAM54A|113115|family with sequence similarity 54, member A##BC063688|FAM54A|113115|family with sequence similarity 54, member A##AK125758|FAM54A|113115|family with sequence similarity 54, member A##NM_001099286|FAM54A|113115|family with sequence similarity 54, member A##NM_138419|FAM54A|113115|family with sequence similarity 54, member A##BC078160|BCLAF1|9774|BCL2-associated transcription factor 1##BC063846|BCLAF1|9774|BCL2-associated transcription factor 1##BX649160|BCLAF1|9774|BCL2-associated transcription factor 1##BC016682|BCLAF1|9774|BCL2-associated transcription factor 1	0.078623	
chr12	53775771	53775882	reg1017431.p1	7.776	+	BC043224 NM_003109	-1402	+	TSC_hg19_v1_chr12_+_53773935 BC062539 NM_001251825 NM_138473 AF255682 AJ272134	-1836	+	AY150674 NM_001173467	-45823	-	NM_001164690 NM_001164691 NM_020547 AK313593 AF172932 BC126316 BC136356 AY714878 HQ258327	41852	+	TSC_hg19_v1_chr12_+_53818869 CR627318	43040	+	NM_001005354 NM_018457 BC001464 TSC_hg19_v1_chr12_+_53835537 AF217517 AK296930 BC014257 BC016064 BC066943 AK074398 BX640962 BC062322 BC021019	59671	+	BC043224|SP1|6667|Sp1 transcription factor##NM_003109|SP1|6667|Sp1 transcription factor##BC062539|SP1|6667|Sp1 transcription factor##NM_001251825|SP1|6667|Sp1 transcription factor##NM_138473|SP1|6667|Sp1 transcription factor##AF255682|SP1|6667|Sp1 transcription factor##AJ272134|SP1|6667|Sp1 transcription factor##AY150674|SP7|121340|Sp7 transcription factor##NM_001173467|SP7|121340|Sp7 transcription factor##NM_001164690|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_001164691|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_020547|AMHR2|269|anti-Mullerian hormone receptor, type II##AK313593|AMHR2|269|anti-Mullerian hormone receptor, type II##AF172932|AMHR2|269|anti-Mullerian hormone receptor, type II##BC126316|AMHR2|269|anti-Mullerian hormone receptor, type II##BC136356|AMHR2|269|anti-Mullerian hormone receptor, type II##AY714878|AMHR2|269|anti-Mullerian hormone receptor, type II##HQ258327|AMHR2|269|anti-Mullerian hormone receptor, type II##CR627318|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_001005354|PRR13|54458|proline rich 13##NM_018457|PRR13|54458|proline rich 13##BC001464|PRR13|54458|proline rich 13##AF217517|PRR13|54458|proline rich 13##BC014257|PRR13|54458|proline rich 13##BC016064|PRR13|54458|proline rich 13##BC066943|PRR13|54458|proline rich 13##AK074398|PRR13|54458|proline rich 13##BX640962|PRR13|54458|proline rich 13##BC062322|PRR13|54458|proline rich 13##BC021019|PRR13|54458|proline rich 13	0.0	
chr13	107185453	107185567	reg1015764.p1	7.776	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-1066919	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	-1067206	+	NM_000452 U10417	-3466315	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	1839	-	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	34975	-	NM_001080396	1333949	-	NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A	0.786721	CTCF.p2:59:0.787
chr22	39955891	39955999	reg1016424.p1	7.776	+	TSC_hg19_v1_chr22_-_39928773 CR456443 BC037573 NM_194326	-27131	-	BC047711 TSC_hg19_v1_chr22_-_39928752 AK025423	-27194	-	TSC_hg19_v1_chr22_-_39928750 CU013041 CU013329	-27245	-	AF129133 AF142567 AF211189 AF393329 NM_001003406 NM_021096	10812	+	BC033895 NM_152512	333848	-	AY069959 NM_004810 TSC_hg19_v1_chr22_+_40297087 AK303332 AK303512 AF236119 AJ011736 BC025692 AF042380 AF102694	341179	+	CR456443|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC037573|RPS19BP1|91582|ribosomal protein S19 binding protein 1##NM_194326|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC047711|RPS19BP1|91582|ribosomal protein S19 binding protein 1##AK025423|RPS19BP1|91582|ribosomal protein S19 binding protein 1##CU013041|RPS19BP1|91582|ribosomal protein S19 binding protein 1##CU013329|RPS19BP1|91582|ribosomal protein S19 binding protein 1##AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##BC033895|ENTHD1|150350|ENTH domain containing 1##NM_152512|ENTHD1|150350|ENTH domain containing 1##AY069959|GRAP2|9402|GRB2-related adaptor protein 2##NM_004810|GRAP2|9402|GRB2-related adaptor protein 2##AK303332|GRAP2|9402|GRB2-related adaptor protein 2##AK303512|GRAP2|9402|GRB2-related adaptor protein 2##AF236119|GRAP2|9402|GRB2-related adaptor protein 2##AJ011736|GRAP2|9402|GRB2-related adaptor protein 2##BC025692|GRAP2|9402|GRB2-related adaptor protein 2##AF042380|GRAP2|9402|GRB2-related adaptor protein 2##AF102694|GRAP2|9402|GRB2-related adaptor protein 2	0.998883	CTCF.p2:-24:0.999
chr7	72251391	72251510	reg1014905.p1	7.776	+	NM_031468	-374091	-	NM_001017440 TSC_hg19_v1_chr7_-_71802376	-449146	-	AK123862 TSC_hg19_v1_chr7_-_71801809	-449672	-	AK303225 AK309556 AK301471 BC068520 AK310913 NM_001145440 NM_001145441	47332	-	TSC_hg19_v1_chr7_+_72300065 BC010183	48649	+	TSC_hg19_v1_chr7_+_72349925 AB014518 NM_172020	98485	+	NM_031468|CALN1|83698|calneuron 1##NM_001017440|CALN1|83698|calneuron 1##AK123862|CALN1|83698|calneuron 1##AK303225|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK309556|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK301471|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##BC068520|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK310913|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145440|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145441|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1##AB014518|POM121|9883|POM121 membrane glycoprotein##NM_172020|POM121|9883|POM121 membrane glycoprotein	0.977776	CTCF.p2:42:0.978
chr10	73533285	73533417	reg1019005.p1	7.775	+	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	-45	-	AK074172 NM_001168390	-35771	-	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	-53759	-	AY563165 AY563166 NM_001171933 NM_001171934	22176	+	AY563161 AY563162 NM_001171935 NM_001171936	38288	+	TSC_hg19_v1_chr10_-_73611004 BT006849 CR456746 CU678650 DQ893009 DQ896255 M60255 M60257 M60258 AB527305 BC001503 J03015 M32221 D00422 M81355 AB209776 BC004275 BC007612	77630	-	BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AY563165|CDH23|64072|cadherin-related 23##AY563166|CDH23|64072|cadherin-related 23##NM_001171933|CDH23|64072|cadherin-related 23##NM_001171934|CDH23|64072|cadherin-related 23##AY563161|CDH23|64072|cadherin-related 23##AY563162|CDH23|64072|cadherin-related 23##NM_001171935|CDH23|64072|cadherin-related 23##NM_001171936|CDH23|64072|cadherin-related 23##BT006849|PSAP|5660|prosaposin##CR456746|PSAP|5660|prosaposin##DQ893009|PSAP|5660|prosaposin##DQ896255|PSAP|5660|prosaposin##M60255|PSAP|5660|prosaposin##M60257|PSAP|5660|prosaposin##M60258|PSAP|5660|prosaposin##BC001503|PSAP|5660|prosaposin##J03015|PSAP|5660|prosaposin##M32221|PSAP|5660|prosaposin##D00422|PSAP|5660|prosaposin##M81355|PSAP|5660|prosaposin##AB209776|PSAP|5660|prosaposin##BC004275|PSAP|5660|prosaposin##BC007612|PSAP|5660|prosaposin	0.035598	
chr8	120366469	120366579	reg1016743.p2	7.775	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	-145885	+	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	-287055	+	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	-402304	-	NM_002514 AK294289 AK312355 TSC_hg19_v1_chr8_+_120428685 AY082381 X96584 BC015028 CU677181 AB463923 DQ891179 DQ894361 CR457432	62137	+	EU131011 DQ891628 DQ894819 D45421 L35594 AK315253 BC034961 TSC_hg19_v1_chr8_-_120651080 NM_001040092 NM_001130863 NM_006209	284538	-	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	478553	-	BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002514|NOV|4856|nephroblastoma overexpressed gene##AK294289|NOV|4856|nephroblastoma overexpressed gene##AK312355|NOV|4856|nephroblastoma overexpressed gene##AY082381|NOV|4856|nephroblastoma overexpressed gene##X96584|NOV|4856|nephroblastoma overexpressed gene##BC015028|NOV|4856|nephroblastoma overexpressed gene##DQ891179|NOV|4856|nephroblastoma overexpressed gene##DQ894361|NOV|4856|nephroblastoma overexpressed gene##CR457432|NOV|4856|nephroblastoma overexpressed gene##EU131011|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ891628|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ894819|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##D45421|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##L35594|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##AK315253|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC034961|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001040092|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001130863|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_006209|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa	0.974716	CTCF.p2:2:0.975
chr12	10093113	10093248	reg1019516.p1	7.774	+	EU095393 EU095394 AY359126 EF127467 NM_001130711	-8238	-	GQ398770 NM_001190765	-59093	+	NM_005127	-70723	-	AY547296 NM_001207010	10734	+	NM_138337 NM_201623 AK314001 BC126289 BC126291 AF247788 BC063424 BC027967 AY426759 AY498550 AY498551 AY498552 CU687708 HQ258146	30921	+	BX647321 AB528702 AF124841 AY358599 NM_001099431 NM_016509	58613	-	EU095393|CLEC2A|387836|C-type lectin domain family 2, member A##EU095394|CLEC2A|387836|C-type lectin domain family 2, member A##AY359126|CLEC2A|387836|C-type lectin domain family 2, member A##EF127467|CLEC2A|387836|C-type lectin domain family 2, member A##NM_001130711|CLEC2A|387836|C-type lectin domain family 2, member A##GQ398770|KLRF2|100431172|killer cell lectin-like receptor subfamily F, member 2##NM_001190765|KLRF2|100431172|killer cell lectin-like receptor subfamily F, member 2##NM_005127|CLEC2B|9976|C-type lectin domain family 2, member B##AY547296|CLEC12A|160364|C-type lectin domain family 12, member A##NM_001207010|CLEC12A|160364|C-type lectin domain family 12, member A##NM_138337|CLEC12A|160364|C-type lectin domain family 12, member A##NM_201623|CLEC12A|160364|C-type lectin domain family 12, member A##AK314001|CLEC12A|160364|C-type lectin domain family 12, member A##BC126289|CLEC12A|160364|C-type lectin domain family 12, member A##BC126291|CLEC12A|160364|C-type lectin domain family 12, member A##AF247788|CLEC12A|160364|C-type lectin domain family 12, member A##BC063424|CLEC12A|160364|C-type lectin domain family 12, member A##BC027967|CLEC12A|160364|C-type lectin domain family 12, member A##AY426759|CLEC12A|160364|C-type lectin domain family 12, member A##AY498550|CLEC12A|160364|C-type lectin domain family 12, member A##AY498551|CLEC12A|160364|C-type lectin domain family 12, member A##AY498552|CLEC12A|160364|C-type lectin domain family 12, member A##HQ258146|CLEC12B|387837|C-type lectin domain family 12, member B##BX647321|CLEC1B|51266|C-type lectin domain family 1, member B##AF124841|CLEC1B|51266|C-type lectin domain family 1, member B##AY358599|CLEC1B|51266|C-type lectin domain family 1, member B##NM_001099431|CLEC1B|51266|C-type lectin domain family 1, member B##NM_016509|CLEC1B|51266|C-type lectin domain family 1, member B	0.374573	CTCF.p2:-24:0.375
chr5	115473618	115473752	reg1019985.p1	7.774	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-52964	+	NM_001195581	-86523	+	AK291655 BC068560 NM_173800 BC060869 AY560010 BC109022 BC109023	-175474	+	TSC_hg19_v1_chr5_+_115898220 D28352	424539	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	436829	-	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2850553	-	AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##NM_001195581|LOC644100|644100|uncharacterized LOC644100##AK291655|AQPEP|206338|laeverin##BC068560|AQPEP|206338|laeverin##NM_173800|AQPEP|206338|laeverin##BC060869|AQPEP|206338|laeverin##AY560010|AQPEP|206338|laeverin##BC109022|AQPEP|206338|laeverin##BC109023|AQPEP|206338|laeverin##AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2	0.041387	
chr2	71175702	71175818	reg1015964.p1	7.773	+	AK291121 NM_001692 BC063411 AK313194 AK301542 BC035978 M25809 AK223151 CU687698 CU690248	-12718	+	TSC_hg19_v1_chr2_+_71127738 BC006336 AB527952 BT007035	-48022	+	TSC_hg19_v1_chr2_+_71127724 NM_012476 Y17791	-48041	+	BC035234 NM_001115116 NM_024933	29814	+	BC010656 AK074840 TSC_hg19_v1_chr2_-_71219046	43271	-	AK315543 TSC_hg19_v1_chr2_-_71221930	46122	-	AK291121|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##NM_001692|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC063411|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK313194|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK301542|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC035978|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##M25809|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK223151|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC006336|VAX2|25806|ventral anterior homeobox 2##BT007035|VAX2|25806|ventral anterior homeobox 2##NM_012476|VAX2|25806|ventral anterior homeobox 2##Y17791|VAX2|25806|ventral anterior homeobox 2##BC035234|ANKRD53|79998|ankyrin repeat domain 53##NM_001115116|ANKRD53|79998|ankyrin repeat domain 53##NM_024933|ANKRD53|79998|ankyrin repeat domain 53##BC010656|TEX261|113419|testis expressed 261##AK074840|TEX261|113419|testis expressed 261##AK315543|TEX261|113419|testis expressed 261	0.948142	CTCF.p2:0:0.948
chr10	73079407	73079504	reg1007536.p2	7.772	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-409	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-430	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-107075	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	77283	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	400137	-	AK074172 NM_001168390	418125	-	BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105	0.395758	CTCF.p2:-1:0.396
chr19	6926163	6926291	reg1017352.p1	7.772	+	BC059395 NM_001974 X81479 AK297003 AK131562 AK290401 AK291518 AK313495 AK297011 CU687372	-38630	+	TSC_hg19_v1_chr19_+_6772811 AB590871	-153419	+	TSC_hg19_v1_chr19_+_6772718 NM_005428 AK225710 AK313307	-153503	+	NM_001136507	104366	+	NM_001164419	113956	-	AF503919 NM_144614	123122	+	BC059395|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_001974|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##X81479|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297003|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK131562|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK290401|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK291518|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK313495|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297011|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor##NM_001136507|MBD3L5|284428|methyl-CpG binding domain protein 3-like 5##NM_001164419|MBD3L4|653656|methyl-CpG binding domain protein 3-like 4##AF503919|MBD3L2|125997|methyl-CpG binding domain protein 3-like 2##NM_144614|MBD3L2|125997|methyl-CpG binding domain protein 3-like 2	0.0	
chr20	49196626	49196780	reg1016562.p2	7.772	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	-69698	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-69771	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-69784	+	AK056792 NM_080829	56722	-	TSC_hg19_v1_chr20_-_49308074 AK124347	111374	-	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	151366	+	BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	0.996796	CTCF.p2:-1:0.997
chr2	169966413	169966513	reg1017849.p2	7.772	+	AY359046 NM_001142271	-28847	+	AF529287 NM_001142270	-37417	+	TSC_hg19_v1_chr2_+_169926132 AF343729 AF240697 AF240698 BC058883	-40333	+	AY265358 AY265357 TSC_hg19_v1_chr2_-_170218991	252518	-	U33837 TSC_hg19_v1_chr2_-_170219045 AK295005 NM_004525	252616	-	TSC_hg19_v1_chr2_+_170335996 AK302851 AY604003 AY604004 NM_152384 BC044593 AL834305 AK312680 AM393220 AB528077 CU692220	369542	+	AY359046|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##NM_001142271|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AF529287|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##NM_001142270|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AF343729|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AF240697|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AF240698|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##BC058883|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AY265358|LRP2|4036|low density lipoprotein receptor-related protein 2##AY265357|LRP2|4036|low density lipoprotein receptor-related protein 2##U33837|LRP2|4036|low density lipoprotein receptor-related protein 2##AK295005|LRP2|4036|low density lipoprotein receptor-related protein 2##NM_004525|LRP2|4036|low density lipoprotein receptor-related protein 2##AY604003|BBS5|129880|Bardet-Biedl syndrome 5##AY604004|BBS5|129880|Bardet-Biedl syndrome 5##NM_152384|BBS5|129880|Bardet-Biedl syndrome 5##BC044593|BBS5|129880|Bardet-Biedl syndrome 5##AL834305|BBS5|129880|Bardet-Biedl syndrome 5##AK312680|BBS5|129880|Bardet-Biedl syndrome 5##AM393220|BBS5|129880|Bardet-Biedl syndrome 5	0.997028	CTCF.p2:-3:0.997
chr3	72867382	72867488	reg1016928.p2	7.772	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-1033164	-	AK313656 NM_173359	-1063512	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-1063913	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	30113	-	BC017274 TSC_hg19_v1_chr3_-_72897575	30140	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	30157	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.014095	
chr6	36750703	36750822	reg1019251.p1	7.772	+	AK125083 TSC_hg19_v1_chr6_+_36665627	-85134	+	TSC_hg19_v1_chr6_+_36646490 BC013967 AB209881 BC001935 BC000312 L25610 L26165 U03106 S67388 BC000275 L47232 L47233 AY008263	-104237	+	NM_000389 TSC_hg19_v1_chr6_+_36646486 AK309512 NM_001220778 U09579	-104291	+	TSC_hg19_v1_chr6_-_36807217 NM_020939	56456	-	TSC_hg19_v1_chr6_-_36807775 AB046819	57030	-	DQ892513 DQ895727 AB528504 TSC_hg19_v1_chr6_-_36842573 AK026636	91815	-	AK125083|RAB44|401258|RAB44, member RAS oncogene family##BC013967|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AB209881|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC001935|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000312|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L25610|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L26165|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U03106|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##S67388|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000275|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47232|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47233|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_000389|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK309512|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_001220778|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U09579|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_020939|CPNE5|57699|copine V##AB046819|CPNE5|57699|copine V##DQ892513|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##DQ895727|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##AK026636|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1	1.486478	CTCF.p2:9:0.879	CTCF.p2:-62:0.608
chr13	25823387	25823548	reg1018313.p2	7.771	+	AK055049 BC041392 TSC_hg19_v1_chr13_-_25746427	-77102	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	-77650	-	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	-77807	-	AB384771 AF406619 AM392681 AM392837 CU691804 TSC_hg19_v1_chr13_-_25861510	37981	-	AK314587 TSC_hg19_v1_chr13_-_25861584 BC040012	38108	-	TSC_hg19_v1_chr13_-_25861621 AL832017 AK093237 AX748005 NM_004685	38188	-	AK055049|FAM123A|219287|family with sequence similarity 123A##BC041392|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##AF406619|MTMR6|9107|myotubularin related protein 6##AM392681|MTMR6|9107|myotubularin related protein 6##AM392837|MTMR6|9107|myotubularin related protein 6##AK314587|MTMR6|9107|myotubularin related protein 6##BC040012|MTMR6|9107|myotubularin related protein 6##AL832017|MTMR6|9107|myotubularin related protein 6##AK093237|MTMR6|9107|myotubularin related protein 6##NM_004685|MTMR6|9107|myotubularin related protein 6	0.237197	CTCF.p2:13:0.237
chr20	8370246	8370382	reg1018677.p1	7.771	+	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	-257284	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-369842	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-369907	-	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	679369	+	AK307482 TSC_hg19_v1_chr20_+_9049806	679484	+	NM_182797 BC117458 BC143868	827744	+	AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4	0.939345	CTCF.p2:9:0.939
chr2	186073140	186073281	reg1019217.p1	7.771	+	BC136602 TSC_hg19_v1_chr2_+_185463544	-609718	+	BC142612 TSC_hg19_v1_chr2_+_185463319	-609905	+	BC150198 TSC_hg19_v1_chr2_+_185463252 AK131402	-609967	+	NM_173651	530144	+	TSC_hg19_v1_chr2_+_187350986 AF220184 NM_018471 AK298615 AK001901 AK297658 AF289586	1277720	+	TSC_hg19_v1_chr2_+_187351010 BC012336 AF161421 AF109366	1277800	+	BC136602|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A##BC150198|ZNF804A|91752|zinc finger protein 804A##AK131402|ZNF804A|91752|zinc finger protein 804A##NM_173651|FSIP2|401024|fibrous sheath interacting protein 2##AF220184|ZC3H15|55854|zinc finger CCCH-type containing 15##NM_018471|ZC3H15|55854|zinc finger CCCH-type containing 15##AK298615|ZC3H15|55854|zinc finger CCCH-type containing 15##AK001901|ZC3H15|55854|zinc finger CCCH-type containing 15##AK297658|ZC3H15|55854|zinc finger CCCH-type containing 15##AF289586|ZC3H15|55854|zinc finger CCCH-type containing 15##BC012336|ZC3H15|55854|zinc finger CCCH-type containing 15##AF161421|ZC3H15|55854|zinc finger CCCH-type containing 15##AF109366|ZC3H15|55854|zinc finger CCCH-type containing 15	0.275004	CTCF.p2:-14:0.275
chr10	27735107	27735260	reg1017678.p1	7.770	+	JF332167 BC107139 AK126025 NM_001034842	-31946	-	TSC_hg19_v1_chr10_-_27531041 AK057469 AF505653 NM_001042473	-204101	-	TSC_hg19_v1_chr10_-_27531030 AB082527	-204168	-	TSC_hg19_v1_chr10_+_27793232 AY574034 AK295443 AK297629 AK299457 BC029350 AF087860 BC015014 NM_021252 AL136734 AK223153 AB464117 AF137372 AF498950 AK001555 AM393142 BT009840 CR533455 CU677165	58046	+	BC036207 TSC_hg19_v1_chr10_-_28034752 AK125339 NM_001242702 NM_173576	299578	-	AK292521 TSC_hg19_v1_chr10_-_28287879 AK001679 NM_018076 BC085611	552701	-	JF332167|PTCHD3|374308|patched domain containing 3##BC107139|PTCHD3|374308|patched domain containing 3##AK126025|PTCHD3|374308|patched domain containing 3##NM_001034842|PTCHD3|374308|patched domain containing 3##AK057469|ACBD5|91452|acyl-CoA binding domain containing 5##AF505653|ACBD5|91452|acyl-CoA binding domain containing 5##NM_001042473|ACBD5|91452|acyl-CoA binding domain containing 5##AB082527|ACBD5|91452|acyl-CoA binding domain containing 5##AY574034|RAB18|22931|RAB18, member RAS oncogene family##AK295443|RAB18|22931|RAB18, member RAS oncogene family##AK297629|RAB18|22931|RAB18, member RAS oncogene family##AK299457|RAB18|22931|RAB18, member RAS oncogene family##BC029350|RAB18|22931|RAB18, member RAS oncogene family##AF087860|RAB18|22931|RAB18, member RAS oncogene family##BC015014|RAB18|22931|RAB18, member RAS oncogene family##NM_021252|RAB18|22931|RAB18, member RAS oncogene family##AL136734|RAB18|22931|RAB18, member RAS oncogene family##AK223153|RAB18|22931|RAB18, member RAS oncogene family##AF137372|RAB18|22931|RAB18, member RAS oncogene family##AF498950|RAB18|22931|RAB18, member RAS oncogene family##AK001555|RAB18|22931|RAB18, member RAS oncogene family##AM393142|RAB18|22931|RAB18, member RAS oncogene family##BT009840|RAB18|22931|RAB18, member RAS oncogene family##CR533455|RAB18|22931|RAB18, member RAS oncogene family##BC036207|MKX|283078|mohawk homeobox##AK125339|MKX|283078|mohawk homeobox##NM_001242702|MKX|283078|mohawk homeobox##NM_173576|MKX|283078|mohawk homeobox##AK292521|ARMC4|55130|armadillo repeat containing 4##AK001679|ARMC4|55130|armadillo repeat containing 4##NM_018076|ARMC4|55130|armadillo repeat containing 4##BC085611|ARMC4|55130|armadillo repeat containing 4	0.957993	CTCF.p2:-15:0.958
chr13	60252465	60252604	reg1019866.p1	7.770	+	TSC_hg19_v1_chr13_+_58207858 AK307545	-2044638	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	-2046587	+	NM_001040429	-2046746	+	BC041395 TSC_hg19_v1_chr13_-_60325215	72610	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	334786	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	485447	-	AK307545|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##NM_001040429|PCDH17|27253|protocadherin 17##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	0.688993	CTCF.p2:-4:0.689
chr16	15850552	15850658	reg1017763.p2	7.770	+	TSC_hg19_v1_chr16_-_15835382 D10667	-15158	-	BX641087 TSC_hg19_v1_chr16_-_15833973	-16650	-	NM_017668 BC001421 TSC_hg19_v1_chr16_+_15744101 AK000108 AK025815	-106498	+	BC101677 BC104906 BC143364 AB020673 AY520816 AY520817 TSC_hg19_v1_chr16_-_15950886 AK308389 BC031040 EU489063 NM_001040113 NM_001040114 NM_002474 NM_022844	100264	-	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	131848	-	AL832498 TSC_hg19_v1_chr16_-_15982471	131880	-	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle##BX641087|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_017668|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC001421|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK000108|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK025815|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC101677|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC104906|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC143364|MYH11|4629|myosin, heavy chain 11, smooth muscle##AB020673|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520816|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520817|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK308389|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC031040|MYH11|4629|myosin, heavy chain 11, smooth muscle##EU489063|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040113|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040114|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_002474|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_022844|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##AL832498|FOPNL|123811|FGFR1OP N-terminal like	0.999504	CTCF.p2:2:1.000
chr5	102918203	102918332	reg1018073.p1	7.770	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-19786	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-323810	+	BC024591 NM_015216 AB463068	-452993	+	AK308672 NM_001962 U26403	4088323	-	TSC_hg19_v1_chr5_-_107717106 AK126722	4798863	-	BC063316 NM_001163315	4799531	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.990915	CTCF.p2:-14:0.991
chr6	28654341	28654466	reg1019513.p1	7.770	+	AK056369 BX647791 AY517631 NM_052923	-99315	-	AJ005277 BC128159 BC128160 NM_001509 NM_003996 AB463692	-160615	+	BC133691 BC148315 AY324826 NM_182701	-170837	-	CU680626 CU688196 DQ890982 DQ894156 AB528391 TSC_hg19_v1_chr6_-_28891498	237066	-	AF230393 AF230394 J03407 TSC_hg19_v1_chr6_-_28891717 AB209885 BC013580 AJ420519	237277	-	TSC_hg19_v1_chr6_-_28891741 BC066924 AX776009 AX776011 NM_006510	237364	-	AK056369|SCAND3|114821|SCAN domain containing 3##BX647791|SCAND3|114821|SCAN domain containing 3##AY517631|SCAND3|114821|SCAN domain containing 3##NM_052923|SCAND3|114821|SCAN domain containing 3##AJ005277|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC128159|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC128160|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##NM_001509|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##NM_003996|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC133691|GPX6|257202|glutathione peroxidase 6 (olfactory)##BC148315|GPX6|257202|glutathione peroxidase 6 (olfactory)##AY324826|GPX6|257202|glutathione peroxidase 6 (olfactory)##NM_182701|GPX6|257202|glutathione peroxidase 6 (olfactory)##DQ890982|TRIM27|5987|tripartite motif containing 27##DQ894156|TRIM27|5987|tripartite motif containing 27##AF230393|TRIM27|5987|tripartite motif containing 27##AF230394|TRIM27|5987|tripartite motif containing 27##J03407|TRIM27|5987|tripartite motif containing 27##AB209885|TRIM27|5987|tripartite motif containing 27##BC013580|TRIM27|5987|tripartite motif containing 27##AJ420519|TRIM27|5987|tripartite motif containing 27##BC066924|TRIM27|5987|tripartite motif containing 27##AX776009|TRIM27|5987|tripartite motif containing 27##AX776011|TRIM27|5987|tripartite motif containing 27##NM_006510|TRIM27|5987|tripartite motif containing 27	0.033942	
chr17	42118930	42119086	reg1017875.p1	7.769	+	CU675657 AB097008 AK130810 AK313855 TSC_hg19_v1_chr17_-_42092332 BC007438 NM_032376 AK172826 AK294237	-26642	-	AK314432 AK300923 BC111713 AY116538 NM_153006 AK074407	-36990	+	BC041057 NM_004160	-37172	-	TSC_hg19_v1_chr17_-_42143970 AK300637 AL832076	24958	-	TSC_hg19_v1_chr17_-_42144008 AK055218 BC044587 BC105288	25008	-	BC066298 NM_152344	25978	-	AB097008|TMEM101|84336|transmembrane protein 101##AK130810|TMEM101|84336|transmembrane protein 101##AK313855|TMEM101|84336|transmembrane protein 101##BC007438|TMEM101|84336|transmembrane protein 101##NM_032376|TMEM101|84336|transmembrane protein 101##AK172826|TMEM101|84336|transmembrane protein 101##AK294237|TMEM101|84336|transmembrane protein 101##AK314432|NAGS|162417|N-acetylglutamate synthase##AK300923|NAGS|162417|N-acetylglutamate synthase##BC111713|NAGS|162417|N-acetylglutamate synthase##AY116538|NAGS|162417|N-acetylglutamate synthase##NM_153006|NAGS|162417|N-acetylglutamate synthase##AK074407|NAGS|162417|N-acetylglutamate synthase##BC041057|PYY|5697|peptide YY##NM_004160|PYY|5697|peptide YY##AK300637|LSM12|124801|LSM12 homolog (S. cerevisiae)##AL832076|LSM12|124801|LSM12 homolog (S. cerevisiae)##AK055218|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC044587|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC105288|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC066298|LSM12|124801|LSM12 homolog (S. cerevisiae)##NM_152344|LSM12|124801|LSM12 homolog (S. cerevisiae)	0.998553	CTCF.p2:-12:0.999
chr7	5214253	5214383	reg1014829.p1	7.769	+	AK293069 NM_001204456 NM_001204513 TSC_hg19_v1_chr7_+_5085490 AF226869 NM_021163	-128817	+	TSC_hg19_v1_chr7_+_5013663 BC068459 AK309798 AK308526 AK311517 BX538059 AK303831 BC026736	-200632	+	AY424288 BC037881 BC048346 TSC_hg19_v1_chr7_-_4998841 AK094524 BC067905 NM_001100600 NM_198403	-215519	-	TSC_hg19_v1_chr7_+_5229863 AL080155 NM_001033518 NM_001033519 NM_015610 NM_016003 AK024279 BC007596 AK023041	15511	+	TSC_hg19_v1_chr7_+_5229890 AK315468 BC004116 BC021200	15579	+	TSC_hg19_v1_chr7_+_5229917 BC021012 BC021068	15597	+	AK293069|RBAK|57786|RB-associated KRAB zinc finger##NM_001204456|RBAK|57786|RB-associated KRAB zinc finger##NM_001204513|RBAK-LOC389458|100533952|RBAK-LOC389458 readthrough##NM_021163|RBAK|57786|RB-associated KRAB zinc finger##BC068459|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK309798|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK308526|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK311517|RNF216P1|441191|ring finger protein 216 pseudogene 1##BX538059|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK303831|RNF216P1|441191|ring finger protein 216 pseudogene 1##BC026736|RNF216P1|441191|ring finger protein 216 pseudogene 1##AY424288|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC037881|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC048346|MMD2|221938|monocyte to macrophage differentiation-associated 2##AK094524|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC067905|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_001100600|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_198403|MMD2|221938|monocyte to macrophage differentiation-associated 2##AL080155|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033518|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033519|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_015610|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_016003|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK024279|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC007596|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK023041|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK315468|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC004116|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021200|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021012|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021068|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	0.969524	CTCF.p2:43:0.970
chr12	64786143	64786295	reg1016677.p1	7.768	+	BC039369 NM_001099676 NM_001170633	-1902	-	BC071634 AK057111 BC036246 AK129933 NM_152440	-170166	-	TSC_hg19_v1_chr12_+_64238511 BC053903 NM_020762 BC029919	-547673	+	TSC_hg19_v1_chr12_+_64798240 NM_007235 AK308108 AK292884	12027	+	BC020569 Y16414 TSC_hg19_v1_chr12_+_64803772 AF039022	17559	+	NM_013254 TSC_hg19_v1_chr12_+_64845917 AK291039 BC034950 AF191838	59674	+	BC039369|C12orf56|115749|chromosome 12 open reading frame 56##NM_001099676|C12orf56|115749|chromosome 12 open reading frame 56##NM_001170633|C12orf56|115749|chromosome 12 open reading frame 56##BC071634|C12orf66|144577|chromosome 12 open reading frame 66##AK057111|C12orf66|144577|chromosome 12 open reading frame 66##BC036246|C12orf66|144577|chromosome 12 open reading frame 66##AK129933|C12orf66|144577|chromosome 12 open reading frame 66##NM_152440|C12orf66|144577|chromosome 12 open reading frame 66##BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##NM_007235|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK308108|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK292884|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##NM_013254|TBK1|29110|TANK-binding kinase 1##AK291039|TBK1|29110|TANK-binding kinase 1##BC034950|TBK1|29110|TANK-binding kinase 1##AF191838|TBK1|29110|TANK-binding kinase 1	0.998295	CTCF.p2:-2:0.998
chr4	71181792	71181904	reg1016538.p1	7.768	+	BC010935 NM_005212 X66417	-73517	+	AY190326 NM_152997 AY358958 BC062213 AF435080 AF086120	-90026	+	EF113908 NM_017855	-119606	+	NM_033122 AK057459 AK315022 AF380838 BC034492 BC046111 CU692300	18864	+	AK312075 NM_012390 BC140927 BC144529	44663	+	NM_006685 AK130485 BC094707 D29833 BC015327	66978	+	BC010935|CSN3|1448|casein kappa##NM_005212|CSN3|1448|casein kappa##X66417|CSN3|1448|casein kappa##AY190326|C4orf7|260436|chromosome 4 open reading frame 7##NM_152997|C4orf7|260436|chromosome 4 open reading frame 7##AY358958|C4orf7|260436|chromosome 4 open reading frame 7##BC062213|C4orf7|260436|chromosome 4 open reading frame 7##AF435080|C4orf7|260436|chromosome 4 open reading frame 7##AF086120|C4orf7|260436|chromosome 4 open reading frame 7##EF113908|ODAM|54959|odontogenic, ameloblast asssociated##NM_017855|ODAM|54959|odontogenic, ameloblast asssociated##NM_033122|CABS1|85438|calcium-binding protein, spermatid-specific 1##AK057459|CABS1|85438|calcium-binding protein, spermatid-specific 1##AK315022|CABS1|85438|calcium-binding protein, spermatid-specific 1##AF380838|CABS1|85438|calcium-binding protein, spermatid-specific 1##BC034492|CABS1|85438|calcium-binding protein, spermatid-specific 1##BC046111|CABS1|85438|calcium-binding protein, spermatid-specific 1##AK312075|SMR3A|26952|submaxillary gland androgen regulated protein 3A##NM_012390|SMR3A|26952|submaxillary gland androgen regulated protein 3A##BC140927|SMR3A|26952|submaxillary gland androgen regulated protein 3A##BC144529|SMR3B|10879|submaxillary gland androgen regulated protein 3B##NM_006685|SMR3B|10879|submaxillary gland androgen regulated protein 3B##BC094707|SMR3B|10879|submaxillary gland androgen regulated protein 3B##D29833|SMR3B|10879|submaxillary gland androgen regulated protein 3B##BC015327|SMR3B|10879|submaxillary gland androgen regulated protein 3B	0.37058	CTCF.p2:-5:0.371
chr1	20208681	20208793	reg1015988.p1	7.767	+	CR457228 BC051880 BC030960 AK000232 AK222991 NM_019062	-67056	-	TSC_hg19_v1_chr1_-_20126374 BX640987 NM_181719	-82327	-	L41147 NM_000871	-216958	+	TSC_hg19_v1_chr1_+_20208887 NM_015207	127	+	TSC_hg19_v1_chr1_+_20208920 AB007928	177	+	TSC_hg19_v1_chr1_+_20208923 AB385337	226	+	CR457228|RNF186|54546|ring finger protein 186##BC051880|RNF186|54546|ring finger protein 186##BC030960|RNF186|54546|ring finger protein 186##AK000232|RNF186|54546|ring finger protein 186##AK222991|RNF186|54546|ring finger protein 186##NM_019062|RNF186|54546|ring finger protein 186##BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4##NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4##L41147|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##NM_000871|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##NM_015207|OTUD3|23252|OTU domain containing 3##AB007928|OTUD3|23252|OTU domain containing 3	0.997536	CTCF.p2:20:0.998
chrX	12586109	12586235	reg1015739.p1	7.767	+	AB002314 NM_014728 AK289694	-429582	+	NM_006800 AK025642	-808425	+	NM_001193270 AK300814	-809455	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	223325	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	223396	+	AK313858 BC033651 NM_016562 AF240467 AF245702	299026	+	AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7	0.982079	CTCF.p2:-4:0.982
chrX	43695799	43695932	reg1017575.p1	7.767	+	TSC_hg19_v1_chrX_+_43515544 AK293926 AK291769 BC008064 CU675911 DQ890676 DQ893857 BT006651	-180303	+	TSC_hg19_v1_chrX_+_43515457 M68840	-180385	+	TSC_hg19_v1_chrX_+_43515423 NM_000240 AK223499	-180451	+	TSC_hg19_v1_chrX_-_43741500 S62734 CU692654 GQ129432 GQ129433	45658	-	AK294306 M69177 TSC_hg19_v1_chrX_-_43741666 BC022494 AK310458 AK312679 NM_000898	45802	-	NM_000266	137055	-	AK293926|MAOA|4128|monoamine oxidase A##AK291769|MAOA|4128|monoamine oxidase A##BC008064|MAOA|4128|monoamine oxidase A##DQ890676|MAOA|4128|monoamine oxidase A##DQ893857|MAOA|4128|monoamine oxidase A##BT006651|MAOA|4128|monoamine oxidase A##M68840|MAOA|4128|monoamine oxidase A##NM_000240|MAOA|4128|monoamine oxidase A##AK223499|MAOA|4128|monoamine oxidase A##S62734|MAOB|4129|monoamine oxidase B##GQ129432|MAOB|4129|monoamine oxidase B##GQ129433|MAOB|4129|monoamine oxidase B##AK294306|MAOB|4129|monoamine oxidase B##M69177|MAOB|4129|monoamine oxidase B##BC022494|MAOB|4129|monoamine oxidase B##AK310458|MAOB|4129|monoamine oxidase B##AK312679|MAOB|4129|monoamine oxidase B##NM_000898|MAOB|4129|monoamine oxidase B##NM_000266|NDP|4693|Norrie disease (pseudoglioma)	0.890198	CTCF.p2:-5:0.890
chr1	201762198	201762283	reg1001239.p1	7.766	+	AB033039 TSC_hg19_v1_chr1_+_201751812	-10455	+	TSC_hg19_v1_chr1_+_201709059 BC069250	-53175	+	TSC_hg19_v1_chr1_+_201709027 NM_001167738 BX648460	-53256	+	TSC_hg19_v1_chr1_+_201798284 NM_018085	36050	+	TSC_hg19_v1_chr1_+_201798330 AF410465	36097	+	AK311191 TSC_hg19_v1_chr1_+_201857806 NM_198149 AK316312 BC111855	95562	+	AB033039|NAV1|89796|neuron navigator 1##BC069250|NAV1|89796|neuron navigator 1##NM_001167738|NAV1|89796|neuron navigator 1##BX648460|NAV1|89796|neuron navigator 1##NM_018085|IPO9|55705|importin 9##AF410465|IPO9|55705|importin 9##AK311191|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##NM_198149|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##AK316312|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC111855|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	0.668336	
chr1	21900652	21900780	reg1019364.p1	7.766	+	TSC_hg19_v1_chr1_+_21835918 AK295608 AK312667 AK298085 BC021289 BC066116 BC090861 AB011406 AH007388 X95994 AK293184 BC110909	-64784	+	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	-64857	+	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	-134034	+	AB003930 TSC_hg19_v1_chr1_-_21949064	48321	-	BC054490 TSC_hg19_v1_chr1_-_21978334 NM_001145658	77631	-	AB007943 M64788 TSC_hg19_v1_chr1_-_21995851 NM_001145657 NM_002885	95117	-	AK295608|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK312667|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK298085|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC021289|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC066116|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC090861|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB011406|ALPL|249|alkaline phosphatase, liver/bone/kidney##X95994|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK293184|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC110909|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein##BC054490|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145658|RAP1GAP|5909|RAP1 GTPase activating protein##AB007943|RAP1GAP|5909|RAP1 GTPase activating protein##M64788|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145657|RAP1GAP|5909|RAP1 GTPase activating protein##NM_002885|RAP1GAP|5909|RAP1 GTPase activating protein	0.99946	CTCF.p2:17:0.999
chr2	120963964	120964076	reg1018233.p1	7.766	+	TSC_hg19_v1_chr2_+_120770652 AK023019 BC054508 AK290895 BC032822 NM_001184938	-193287	+	TSC_hg19_v1_chr2_+_120770604 NM_001184937 NM_001184939 NM_020909	-193417	+	M68941 NM_002830 TSC_hg19_v1_chr2_+_120517497 AK314836 BC010674	-446620	+	TSC_hg19_v1_chr2_-_120980957 BC016849 AK289880 BC080607 AK024632	16917	-	TSC_hg19_v1_chr2_-_120980977 AF530474 NM_024121	16978	-	NM_002881 TSC_hg19_v1_chr2_+_121010418	46400	+	AK023019|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC054508|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK290895|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC032822|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184938|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184937|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184939|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_020909|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC016849|TMEM185B|79134|transmembrane protein 185B##BC080607|TMEM185B|79134|transmembrane protein 185B##AK024632|TMEM185B|79134|transmembrane protein 185B##AF530474|TMEM185B|79134|transmembrane protein 185B##NM_024121|TMEM185B|79134|transmembrane protein 185B##NM_002881|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)	0.339992	CTCF.p2:-4:0.340
chr3	196756705	196756866	reg1017851.p2	7.766	+	TSC_hg19_v1_chr3_-_196756689 NM_033316 NM_005929	-83	-	BT007377 AB527337 M12154 BC093920 BC111947 BC143257 BC002623 BC001875 BC007550 BC053510 BC071910 TSC_hg19_v1_chr3_-_196756658 BC032752	-162	-	BC032042 TSC_hg19_v1_chr3_+_196729798	-26975	+	AK294855 NM_001204387 NM_001204388	154216	-	TSC_hg19_v1_chr3_-_197024987 BC015560 BC028486 AK310893	268148	-	BC140841 BC144651 TSC_hg19_v1_chr3_-_197025506 AK304280 NM_001098424 NM_001204386 NM_004087 U13896 U13897 AK310596	268689	-	NM_033316|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_005929|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BT007377|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##M12154|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC093920|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC111947|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC143257|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC002623|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC001875|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC007550|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC053510|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC071910|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC032752|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC032042|MFI2-AS1|100507057|MFI2 antisense RNA 1 (non-protein coding)##AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)##BC015560|DLG1|1739|discs, large homolog 1 (Drosophila)##BC028486|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310893|DLG1|1739|discs, large homolog 1 (Drosophila)##BC140841|DLG1|1739|discs, large homolog 1 (Drosophila)##BC144651|DLG1|1739|discs, large homolog 1 (Drosophila)##AK304280|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001098424|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204386|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_004087|DLG1|1739|discs, large homolog 1 (Drosophila)##U13896|DLG1|1739|discs, large homolog 1 (Drosophila)##U13897|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310596|DLG1|1739|discs, large homolog 1 (Drosophila)	0.989465	CTCF.p2:-1:0.989
chr8	132871920	132872055	reg1017885.p1	7.766	+	NM_001115	-819153	-	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	-1415956	-	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-1843104	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	44370	+	TSC_hg19_v1_chr8_+_132916379 BC108667	44390	+	AK307433 TSC_hg19_v1_chr8_+_132916394	44403	+	NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC108667|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##AK307433|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.366317	CTCF.p2:16:0.366
chr1	41096302	41096424	reg1018208.p1	7.765	+	TSC_hg19_v1_chr1_+_40997324 BC091518	-99051	+	AK094072 NM_152373 TSC_hg19_v1_chr1_+_40997288	-99103	+	TSC_hg19_v1_chr1_+_40974438 AK021507 AK024797 AK094092 NM_022774 BC021969 AK023245	-121918	+	TSC_hg19_v1_chr1_-_41131126 BC003103	34771	-	D87074 NM_014747 TSC_hg19_v1_chr1_-_41131355	34980	-	NM_001142587 NM_001142588 NM_001142589 NM_014223 TSC_hg19_v1_chr1_+_41157288	60909	+	BC091518|ZNF684|127396|zinc finger protein 684##AK094072|ZNF684|127396|zinc finger protein 684##NM_152373|ZNF684|127396|zinc finger protein 684##AK021507|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##AK024797|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##AK094092|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##NM_022774|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##BC021969|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##AK023245|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##BC003103|RIMS3|9783|regulating synaptic membrane exocytosis 3##D87074|RIMS3|9783|regulating synaptic membrane exocytosis 3##NM_014747|RIMS3|9783|regulating synaptic membrane exocytosis 3##NM_001142587|NFYC|4802|nuclear transcription factor Y, gamma##NM_001142588|NFYC|4802|nuclear transcription factor Y, gamma##NM_001142589|NFYC|4802|nuclear transcription factor Y, gamma##NM_014223|NFYC|4802|nuclear transcription factor Y, gamma	0.982199	CTCF.p2:11:0.982
chr1	46998605	46998706	reg1018290.p1	7.765	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	-25983	+	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	-138679	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-192212	+	NM_001097611	18231	-	BC002755 AB000409 AK096423 TSC_hg19_v1_chr1_-_47069922	71249	-	TSC_hg19_v1_chr1_-_47069924 AK290456	71273	-	NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##NM_001097611|KNCN|148930|kinocilin##BC002755|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AB000409|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK096423|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK290456|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1	0.971395	CTCF.p2:13:0.971
chr16	62904534	62904696	reg1018318.p3	7.765	+	AK124734 NM_001796	-833877	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-4136418	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-4185959	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	2251287	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	2251353	-	TSC_hg19_v1_chr16_-_65155987 AK297377	2251379	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.827693	CTCF.p2:45:0.828
chr17	64670013	64670158	reg1018984.p1	7.764	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	-371158	+	TSC_hg19_v1_chr17_+_64298733 BC053321	-371335	+	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	-444560	-	AK290171 TSC_hg19_v1_chr17_+_64831234	161150	+	BC101633 NM_145811 BC101607 AF361351 AF458898	203335	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	290804	+	NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##BC053321|PRKCA|5578|protein kinase C, alpha##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	0.0	
chr7	1222780	1222899	reg1018113.p1	7.764	+	TSC_hg19_v1_chr7_+_1200097 AK090593	-22726	+	TSC_hg19_v1_chr7_-_1199853 NM_182491	-23000	-	AK290170 TSC_hg19_v1_chr7_-_1199815	-23025	-	TSC_hg19_v1_chr7_+_1272552 NM_001080461	49763	+	CU691530 EU832111 EU832205 AK074068 BC037988 TSC_hg19_v1_chr7_-_1499102	276194	-	TSC_hg19_v1_chr7_-_1499107 AK027124 NM_182924	276268	-	NM_182491|ZFAND2A|90637|zinc finger, AN1-type domain 2A##AK290170|ZFAND2A|90637|zinc finger, AN1-type domain 2A##NM_001080461|UNCX|340260|UNC homeobox##EU832111|MICALL2|79778|MICAL-like 2##EU832205|MICALL2|79778|MICAL-like 2##AK074068|MICALL2|79778|MICAL-like 2##BC037988|MICALL2|79778|MICAL-like 2##AK027124|MICALL2|79778|MICAL-like 2##NM_182924|MICALL2|79778|MICAL-like 2	0.965339	CTCF.p2:-19:0.965
chr17	29700317	29700449	reg1016964.p1	7.763	+	TSC_hg19_v1_chr17_-_29648631 BC035572 AK295311 AK312348 NM_001003927 NM_014210	-51685	-	TSC_hg19_v1_chr17_-_29641103 AK297087 NM_006495	-59272	-	TSC_hg19_v1_chr17_-_29641092 BC005926	-59294	-	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	18284	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	18481	+	TSC_hg19_v1_chr17_+_29815032 AK097424	114678	+	BC035572|EVI2A|2123|ecotropic viral integration site 2A##AK295311|EVI2A|2123|ecotropic viral integration site 2A##AK312348|EVI2A|2123|ecotropic viral integration site 2A##NM_001003927|EVI2A|2123|ecotropic viral integration site 2A##NM_014210|EVI2A|2123|ecotropic viral integration site 2A##AK297087|EVI2B|2124|ecotropic viral integration site 2B##NM_006495|EVI2B|2124|ecotropic viral integration site 2B##BC005926|EVI2B|2124|ecotropic viral integration site 2B##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)	0.090149	
chr18	74771638	74771742	reg1016765.p1	7.763	+	TSC_hg19_v1_chr18_-_74729052 AK314553 NM_001025081 NM_001025090 NM_001025092 NM_002385 AK293922	-42623	-	CR536534 CR541919 TSC_hg19_v1_chr18_-_74729012 AK296492 M30515 M30516 BC008749 BC101771 BC101773 BC143348 BC143350 M30047 BC080654 M13577 AK289893 AK098402 AK128788 CR627018 AK128770 BC068550	-42695	-	AK074315 TSC_hg19_v1_chr18_-_74728814	-42934	-	TSC_hg19_v1_chr18_-_74844720 BC065248 AB208986 L18865	73027	-	TSC_hg19_v1_chr18_-_74844774 NM_001025100 NM_001025101	73089	-	TSC_hg19_v1_chr18_+_74961925 NM_001480	190276	+	AK314553|MBP|4155|myelin basic protein##NM_001025081|MBP|4155|myelin basic protein##NM_001025090|MBP|4155|myelin basic protein##NM_001025092|MBP|4155|myelin basic protein##NM_002385|MBP|4155|myelin basic protein##AK293922|MBP|4155|myelin basic protein##CR536534|MBP|4155|myelin basic protein##CR541919|MBP|4155|myelin basic protein##M30515|MBP|4155|myelin basic protein##M30516|MBP|4155|myelin basic protein##BC008749|MBP|4155|myelin basic protein##BC101771|MBP|4155|myelin basic protein##BC101773|MBP|4155|myelin basic protein##BC143348|MBP|4155|myelin basic protein##BC143350|MBP|4155|myelin basic protein##M30047|MBP|4155|myelin basic protein##BC080654|MBP|4155|myelin basic protein##M13577|MBP|4155|myelin basic protein##AK289893|MBP|4155|myelin basic protein##AK098402|MBP|4155|myelin basic protein##AK128788|MBP|4155|myelin basic protein##CR627018|MBP|4155|myelin basic protein##AK128770|MBP|4155|myelin basic protein##BC068550|MBP|4155|myelin basic protein##AK074315|MBP|4155|myelin basic protein##BC065248|MBP|4155|myelin basic protein##AB208986|MBP|4155|myelin basic protein##L18865|MBP|4155|myelin basic protein##NM_001025100|MBP|4155|myelin basic protein##NM_001025101|MBP|4155|myelin basic protein##NM_001480|GALR1|2587|galanin receptor 1	0.999454	CTCF.p2:-9:0.999
chr4	4432437	4432565	reg1020512.p1	7.763	+	TSC_hg19_v1_chr4_+_4388828 AK299657 AK312288 AK301911	-43682	+	TSC_hg19_v1_chr4_+_4388753 AX775767 BC001745	-43757	+	AK125172 NM_001040101 NM_014392	-44519	+	AY453396 BT007150 BT020135 CU677069 AB028741 BC014613 BC071980 TSC_hg19_v1_chr4_-_4543708	111203	-	TSC_hg19_v1_chr4_-_4543741 AK310026	111230	-	TSC_hg19_v1_chr4_-_4543750 NM_016930	111260	-	AK299657|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK312288|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK301911|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##BC001745|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK125172|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##NM_001040101|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##NM_014392|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AY453396|STX18|53407|syntaxin 18##BT007150|STX18|53407|syntaxin 18##BT020135|STX18|53407|syntaxin 18##AB028741|STX18|53407|syntaxin 18##BC014613|STX18|53407|syntaxin 18##BC071980|STX18|53407|syntaxin 18##AK310026|STX18|53407|syntaxin 18##NM_016930|STX18|53407|syntaxin 18	0.981558	CTCF.p2:7:0.982
chr8	87631320	87631486	reg1017358.p1	7.763	+	AK292912 BC007017 BC008385 TSC_hg19_v1_chr8_+_87526694 BC066597 BC036242 AB014536 AF077226	-104692	+	TSC_hg19_v1_chr8_+_87526660 NM_003909	-104750	+	TSC_hg19_v1_chr8_-_87520981 NM_016033	-110407	-	BC150601 AF272900 NM_019098 DQ426865	124509	-	AK093121 AX747937 BC117326 BC117328 NM_173538	247270	+	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	1254856	-	AK292912|CPNE3|8895|copine III##BC007017|CPNE3|8895|copine III##BC008385|CPNE3|8895|copine III##BC066597|CPNE3|8895|copine III##BC036242|CPNE3|8895|copine III##AB014536|CPNE3|8895|copine III##AF077226|CPNE3|8895|copine III##NM_003909|CPNE3|8895|copine III##NM_016033|FAM82B|51115|family with sequence similarity 82, member B##BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3##AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3##NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2	0.993177	CTCF.p2:11:0.993
chr11	8936104	8936226	reg1017853.p2	7.762	+	TSC_hg19_v1_chr11_+_8932895 BC030996 BX648821 AB528705 AF512007	-3223	+	AF493783 AF493784 AF493785 NM_001206646 NM_001206647 NM_001206648 NM_020642 TSC_hg19_v1_chr11_+_8932745 AK294506 AK294549 AK075308	-3415	+	BC036655 NM_005418	-3668	-	BC027865 NM_020643	18378	-	NM_020646	28414	-	AK074677 TSC_hg19_v1_chr11_-_8985939 AB097017 BC015884 AK310723 AK316216 AK313065	49778	-	BC030996|AKIP1|56672|A kinase (PRKA) interacting protein 1##AF512007|AKIP1|56672|A kinase (PRKA) interacting protein 1##AF493783|AKIP1|56672|A kinase (PRKA) interacting protein 1##AF493784|AKIP1|56672|A kinase (PRKA) interacting protein 1##AF493785|AKIP1|56672|A kinase (PRKA) interacting protein 1##NM_001206646|AKIP1|56672|A kinase (PRKA) interacting protein 1##NM_001206647|AKIP1|56672|A kinase (PRKA) interacting protein 1##NM_001206648|AKIP1|56672|A kinase (PRKA) interacting protein 1##NM_020642|AKIP1|56672|A kinase (PRKA) interacting protein 1##AK294506|AKIP1|56672|A kinase (PRKA) interacting protein 1##AK294549|AKIP1|56672|A kinase (PRKA) interacting protein 1##AK075308|AKIP1|56672|A kinase (PRKA) interacting protein 1##BC036655|ST5|6764|suppression of tumorigenicity 5##NM_005418|ST5|6764|suppression of tumorigenicity 5##BC027865|C11orf16|56673|chromosome 11 open reading frame 16##NM_020643|C11orf16|56673|chromosome 11 open reading frame 16##NM_020646|ASCL3|56676|achaete-scute complex homolog 3 (Drosophila)##AK074677|TMEM9B|56674|TMEM9 domain family, member B##AB097017|TMEM9B|56674|TMEM9 domain family, member B##BC015884|TMEM9B|56674|TMEM9 domain family, member B##AK310723|TMEM9B|56674|TMEM9 domain family, member B##AK316216|TMEM9B|56674|TMEM9 domain family, member B##AK313065|TMEM9B|56674|TMEM9 domain family, member B	0.826974	CTCF.p2:-10:0.827
chr14	68718257	68718410	reg1019984.p1	7.761	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-431813	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-435034	-	AK315462 NM_152443	-549731	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	541387	-	NM_001244698 NM_004926	542297	-	NM_001244701 AB528867	544651	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.025422	
chr17	31325463	31325595	reg1017344.p1	7.761	+	AF216311 NM_173847 BC100886 BC100887	-6627	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-70326	+	NM_001033504 NM_015544	-70602	+	AL834182 NM_183377	294476	-	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	1158158	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	1256802	+	AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##NM_001033504|TMEM98|26022|transmembrane protein 98##NM_015544|TMEM98|26022|transmembrane protein 98##AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2	0.997106	CTCF.p2:-1:0.997
chr2	121101066	121101170	reg1015794.p1	7.761	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-90614	+	AK127675 AK304588 TSC_hg19_v1_chr2_+_121010450 M35416	-90674	+	NM_002881 TSC_hg19_v1_chr2_+_121010418	-90698	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	2679	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	453775	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	941655	-	BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK127675|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK304588|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##M35416|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##NM_002881|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1	0.033451	
chr8	125660046	125660173	reg1017957.p1	7.761	+	AF116674 TSC_hg19_v1_chr8_-_125580771	-79348	-	TSC_hg19_v1_chr8_-_125579395 AK126989	-80703	-	NM_005005 AF261090 TSC_hg19_v1_chr8_+_125551363 AF044956 AF067168 AK026538 AL136714 BC007672 AK302286 AK313432 AB463917	-108725	+	TSC_hg19_v1_chr8_-_125716430 U50573	56323	-	EF560715 TSC_hg19_v1_chr8_-_125740463 AK027015	80336	-	TSC_hg19_v1_chr8_-_125740689 AF086645 NM_014751	80614	-	AF116674|MTSS1|9788|metastasis suppressor 1##AK126989|MTSS1|9788|metastasis suppressor 1##NM_005005|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF261090|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF044956|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF067168|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AK026538|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AL136714|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##BC007672|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AK313432|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##U50573|MTSS1|9788|metastasis suppressor 1##EF560715|MTSS1|9788|metastasis suppressor 1##AK027015|MTSS1|9788|metastasis suppressor 1##AF086645|MTSS1|9788|metastasis suppressor 1##NM_014751|MTSS1|9788|metastasis suppressor 1	0.577216	CTCF.p2:7:0.577
chr16	47177401	47177515	reg1013429.p1	7.760	+	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	-169863	-	CU677459 AF011793 AJ001309 TSC_hg19_v1_chr16_-_47007561	-169936	-	TSC_hg19_v1_chr16_-_47005340 Y13350	-172110	-	AY358718 BC108727 TSC_hg19_v1_chr16_-_47177852 BC098380	388	-	TSC_hg19_v1_chr16_-_47177902 AK074937 NM_001201477 NM_018092	464	-	TSC_hg19_v1_chr16_-_47494975 BC006321 DQ893514 DQ896493 AF503339 AK027596	317407	-	AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AJ001309|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AY358718|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC108727|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC098380|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##AK074937|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_001201477|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_018092|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC006321|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ893514|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ896493|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF503339|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK027596|ITFG1|81533|integrin alpha FG-GAP repeat containing 1	0.955718	CTCF.p2:-3:0.956
chr11	40328629	40328728	reg1016219.p2	7.759	+	AB046800 NM_020929	-13015	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-14084	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-3708876	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	3004840	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	3004886	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	3004962	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.998503	CTCF.p2:-4:0.999
chr1	14933277	14933379	reg1013695.p1	7.759	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	-8134	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-857387	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-857405	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	317391	+	AY505121 NM_001018001	322967	+	AY505122 NM_001017999	339086	+	AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein	0.523727	CTCF.p2:-8:0.524
chr16	50581337	50581468	reg1019307.p1	7.759	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	-178572	-	NM_001114 D25538	-259579	+	TSC_hg19_v1_chr16_+_50308041 BC039891	-273349	+	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	924	+	TSC_hg19_v1_chr16_-_50647562 AK124375	66176	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	133775	-	AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20	0.952434	CTCF.p2:23:0.952
chr11	19973181	19973301	reg1015667.p1	7.758	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	-238375	+	AB063115 NM_001111018 AJ488205	-600926	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-710040	-	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	71147	+	TSC_hg19_v1_chr11_+_20049136 AK307574	75891	+	AK290458 TSC_hg19_v1_chr11_+_20070637	97382	+	AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##AK290458|NAV2|89797|neuron navigator 2	0.925428	CTCF.p2:-25:0.925
chr4	76043339	76043453	reg1016776.p1	7.758	+	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	-185024	+	BC011618 S55606 AB109441 NM_001729	-323613	-	BC009799 M30704 NM_001657	-562768	+	TSC_hg19_v1_chr4_-_76439504 AK309555 AK308754 AB528599 AF247041 CU689096 CU690404 GQ129342 GQ129343 GQ250944 GQ250945 GQ250946 JF691538 JF691539 AB209072 AF255666 AY888047 GU937000 AF305424	396120	-	TSC_hg19_v1_chr4_-_76439614 AK091501 AX747022 BC031057 BC047393 NM_001008925 NM_001009922 NM_015436	396218	-	NM_144721 TSC_hg19_v1_chr4_+_76439670 AK310575 AK056959 AK303658 AK308914 AK309187 AL833350 BX647579 AK313765	396295	+	NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##AK309555|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK308754|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF247041|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129342|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129343|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250944|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250945|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250946|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AB209072|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF255666|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AY888047|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GU937000|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF305424|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK091501|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC031057|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC047393|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001008925|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001009922|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_015436|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_144721|THAP6|152815|THAP domain containing 6##AK310575|THAP6|152815|THAP domain containing 6##AK056959|THAP6|152815|THAP domain containing 6##AK303658|THAP6|152815|THAP domain containing 6##AK308914|THAP6|152815|THAP domain containing 6##AK309187|THAP6|152815|THAP domain containing 6##AL833350|THAP6|152815|THAP domain containing 6##BX647579|THAP6|152815|THAP domain containing 6##AK313765|THAP6|152815|THAP domain containing 6	0.053843	
chr10	111716542	111716648	reg1017999.p1	7.757	+	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	-33318	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	-33386	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-2792219	-	NM_019903 AB209810 BC057285	49186	+	TSC_hg19_v1_chr10_+_111767741 BX647403 NM_001121 NM_016824 BC062559 BX648016	51134	+	AK291488 TSC_hg19_v1_chr10_+_111767988 U37122 BC043143	51372	+	AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)##BX647403|ADD3|120|adducin 3 (gamma)##NM_001121|ADD3|120|adducin 3 (gamma)##NM_016824|ADD3|120|adducin 3 (gamma)##BC062559|ADD3|120|adducin 3 (gamma)##BX648016|ADD3|120|adducin 3 (gamma)##AK291488|ADD3|120|adducin 3 (gamma)##U37122|ADD3|120|adducin 3 (gamma)##BC043143|ADD3|120|adducin 3 (gamma)	0.101705	
chr10	99805646	99805789	reg1020044.p1	7.757	+	AK057190 NM_001206528 NM_018058	-15133	-	AK292084 AJ276171 TSC_hg19_v1_chr10_-_99790379	-15355	-	BC110810 NM_001010917	-195723	+	NM_014472 AK292546 TSC_hg19_v1_chr10_+_99894414	88680	+	TSC_hg19_v1_chr10_+_99894427 AF525304 BC047908 BC098175 BC098268 BC098359 BC099848	88718	+	TSC_hg19_v1_chr10_-_100027952 AK172781 BC013153 BC035470 NM_032211	222275	-	AK057190|CRTAC1|55118|cartilage acidic protein 1##NM_001206528|CRTAC1|55118|cartilage acidic protein 1##NM_018058|CRTAC1|55118|cartilage acidic protein 1##AK292084|CRTAC1|55118|cartilage acidic protein 1##AJ276171|CRTAC1|55118|cartilage acidic protein 1##BC110810|GOLGA7B|401647|golgin A7 family, member B##NM_001010917|GOLGA7B|401647|golgin A7 family, member B##NM_014472|C10orf28|27291|chromosome 10 open reading frame 28##AK292546|C10orf28|27291|chromosome 10 open reading frame 28##AF525304|C10orf28|27291|chromosome 10 open reading frame 28##BC047908|C10orf28|27291|chromosome 10 open reading frame 28##BC098175|C10orf28|27291|chromosome 10 open reading frame 28##BC098268|C10orf28|27291|chromosome 10 open reading frame 28##BC098359|C10orf28|27291|chromosome 10 open reading frame 28##BC099848|C10orf28|27291|chromosome 10 open reading frame 28##AK172781|LOXL4|84171|lysyl oxidase-like 4##BC013153|LOXL4|84171|lysyl oxidase-like 4##BC035470|LOXL4|84171|lysyl oxidase-like 4##NM_032211|LOXL4|84171|lysyl oxidase-like 4	0.96717	CTCF.p2:8:0.967
chr13	41257194	41257320	reg1013139.p1	7.757	+	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	-16545	-	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-1027396	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-1079895	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	88035	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	88075	-	NM_014252 TSC_hg19_v1_chr13_+_41363596 BC002702	106332	+	BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31##NM_014252|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##BC002702|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15	0.986072	CTCF.p2:53:0.986
chr6	64633191	64633297	reg1018951.p1	7.757	+	AF091622 BC113650 BC113652 NM_015153 D87685 AB385299	-276802	+	TSC_hg19_v1_chr6_+_64346027 BX648268 AK290491	-287227	+	TSC_hg19_v1_chr6_+_64345729 AK315868 AK298580	-287421	+	AY358133 NM_198283 AK310478	1656461	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	1783849	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	3965784	-	AF091622|PHF3|23469|PHD finger protein 3##BC113650|PHF3|23469|PHD finger protein 3##BC113652|PHF3|23469|PHD finger protein 3##NM_015153|PHF3|23469|PHD finger protein 3##D87685|PHF3|23469|PHD finger protein 3##BX648268|PHF3|23469|PHD finger protein 3##AK290491|PHF3|23469|PHD finger protein 3##AK315868|PHF3|23469|PHD finger protein 3##AK298580|PHF3|23469|PHD finger protein 3##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3	0.655749	CTCF.p2:-8:0.656
chr1	32300255	32300395	reg1020283.p1	7.756	+	BC114430 AK131447 NM_144569 AK091016 AX746730	-18726	-	TSC_hg19_v1_chr1_-_32264318 AK095829	-36004	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	-36085	-	NM_001195100 NM_001195101	84933	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	103606	-	TSC_hg19_v1_chr1_-_32403992 NM_080391	103672	-	BC114430|SPOCD1|90853|SPOC domain containing 1##AK131447|SPOCD1|90853|SPOC domain containing 1##NM_144569|SPOCD1|90853|SPOC domain containing 1##AK091016|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2	0.468982	CTCF.p2:2:0.409
chr19	51433228	51433319	reg1017042.p1	7.756	+	AF113140 AF259969 AY923170 BC069325 BC069403 BC069429 BC069489 BC096175 BC096176 BC096177 BC096178 CU686804 NM_004917	-19280	-	AK300527 AK309982 BC005196 NM_001002231 NM_005551 AK309985 AK300549 AK300566 AK309973 AY429509 AY429510 AF188745 AF188746 AF188747 S39329 CU675035 AB590372 DQ890672 DQ893853 AF336106 BT006650	-56565	+	AF335477 AF335478 AX772834 AX772836 BC005307 NM_001030047 NM_001030048 NM_001030050 NM_001648 S75755 U17040 X05332 BC056665 AJ310937 AJ459784 AJ310938 AK311887 AK312933 AJ459782 AJ459783 AJ512346 M26663 DQ890670 DQ893851 AB463810 CU690730 BT019862 M21895 M21896 M21897	-75077	+	AF168768 BC008036 AK223421 AF435980 AF435981 AY279380 AY279381 AY359010 NM_001077491 NM_001077492 NM_012427	22978	-	BC015525 AY318868 AY318869 AY318870 AY318867 NM_001012964 NM_001012965	38751	-	AF013988 AK314897 D78203 AY279383 NM_002774 U62801	39599	-	AF113140|KLK4|9622|kallikrein-related peptidase 4##AF259969|KLK4|9622|kallikrein-related peptidase 4##AY923170|KLK4|9622|kallikrein-related peptidase 4##BC069325|KLK4|9622|kallikrein-related peptidase 4##BC069403|KLK4|9622|kallikrein-related peptidase 4##BC069429|KLK4|9622|kallikrein-related peptidase 4##BC069489|KLK4|9622|kallikrein-related peptidase 4##BC096175|KLK4|9622|kallikrein-related peptidase 4##BC096176|KLK4|9622|kallikrein-related peptidase 4##BC096177|KLK4|9622|kallikrein-related peptidase 4##BC096178|KLK4|9622|kallikrein-related peptidase 4##NM_004917|KLK4|9622|kallikrein-related peptidase 4##AK300527|KLK2|3817|kallikrein-related peptidase 2##AK309982|KLK2|3817|kallikrein-related peptidase 2##BC005196|KLK2|3817|kallikrein-related peptidase 2##NM_001002231|KLK2|3817|kallikrein-related peptidase 2##NM_005551|KLK2|3817|kallikrein-related peptidase 2##AK309985|KLK2|3817|kallikrein-related peptidase 2##AK300549|KLK2|3817|kallikrein-related peptidase 2##AK300566|KLK2|3817|kallikrein-related peptidase 2##AK309973|KLK2|3817|kallikrein-related peptidase 2##AY429509|KLK2|3817|kallikrein-related peptidase 2##AY429510|KLK2|3817|kallikrein-related peptidase 2##AF188745|KLK2|3817|kallikrein-related peptidase 2##AF188746|KLK2|3817|kallikrein-related peptidase 2##AF188747|KLK2|3817|kallikrein-related peptidase 2##S39329|KLK2|3817|kallikrein-related peptidase 2##DQ890672|KLK2|3817|kallikrein-related peptidase 2##DQ893853|KLK2|3817|kallikrein-related peptidase 2##AF336106|KLK2|3817|kallikrein-related peptidase 2##BT006650|KLK2|3817|kallikrein-related peptidase 2##AF335477|KLK3|354|kallikrein-related peptidase 3##AF335478|KLK3|354|kallikrein-related peptidase 3##AX772834|KLK3|354|kallikrein-related peptidase 3##BC005307|KLK3|354|kallikrein-related peptidase 3##NM_001030047|KLK3|354|kallikrein-related peptidase 3##NM_001030048|KLK3|354|kallikrein-related peptidase 3##NM_001030050|KLK3|354|kallikrein-related peptidase 3##NM_001648|KLK3|354|kallikrein-related peptidase 3##S75755|KLK3|354|kallikrein-related peptidase 3##U17040|KLK3|354|kallikrein-related peptidase 3##X05332|KLK3|354|kallikrein-related peptidase 3##BC056665|KLK3|354|kallikrein-related peptidase 3##AJ310937|KLK3|354|kallikrein-related peptidase 3##AJ459784|KLK3|354|kallikrein-related peptidase 3##AJ310938|KLK3|354|kallikrein-related peptidase 3##AK312933|KLK3|354|kallikrein-related peptidase 3##AJ459782|KLK3|354|kallikrein-related peptidase 3##AJ459783|KLK3|354|kallikrein-related peptidase 3##AJ512346|KLK3|354|kallikrein-related peptidase 3##M26663|KLK3|354|kallikrein-related peptidase 3##DQ890670|KLK3|354|kallikrein-related peptidase 3##DQ893851|KLK3|354|kallikrein-related peptidase 3##BT019862|KLK3|354|kallikrein-related peptidase 3##M21895|KLK3|354|kallikrein-related peptidase 3##M21896|KLK3|354|kallikrein-related peptidase 3##M21897|KLK3|354|kallikrein-related peptidase 3##AF168768|KLK5|25818|kallikrein-related peptidase 5##BC008036|KLK5|25818|kallikrein-related peptidase 5##AK223421|KLK5|25818|kallikrein-related peptidase 5##AF435980|KLK5|25818|kallikrein-related peptidase 5##AF435981|KLK5|25818|kallikrein-related peptidase 5##AY279380|KLK5|25818|kallikrein-related peptidase 5##AY279381|KLK5|25818|kallikrein-related peptidase 5##AY359010|KLK5|25818|kallikrein-related peptidase 5##NM_001077491|KLK5|25818|kallikrein-related peptidase 5##NM_001077492|KLK5|25818|kallikrein-related peptidase 5##NM_012427|KLK5|25818|kallikrein-related peptidase 5##BC015525|KLK6|5653|kallikrein-related peptidase 6##AY318868|KLK6|5653|kallikrein-related peptidase 6##AY318869|KLK6|5653|kallikrein-related peptidase 6##AY318870|KLK6|5653|kallikrein-related peptidase 6##AY318867|KLK6|5653|kallikrein-related peptidase 6##NM_001012964|KLK6|5653|kallikrein-related peptidase 6##NM_001012965|KLK6|5653|kallikrein-related peptidase 6##AF013988|KLK6|5653|kallikrein-related peptidase 6##AK314897|KLK6|5653|kallikrein-related peptidase 6##D78203|KLK6|5653|kallikrein-related peptidase 6##AY279383|KLK6|5653|kallikrein-related peptidase 6##NM_002774|KLK6|5653|kallikrein-related peptidase 6##U62801|KLK6|5653|kallikrein-related peptidase 6	0.983318	CTCF.p2:-2:0.983
chr8	110966009	110966143	reg1019273.p1	7.756	+	NM_001099743 NM_001099744	-262057	-	AK290469 NM_001099745 NM_001099746	-272843	-	AL713645 AB195676 AB195677 AB195678 NM_001099747 NM_001099748 NM_001099749 NM_001099750 NM_017786	-305007	-	BC028739 AK313469 AF167082 NM_014379 AK297393	20890	-	AB114605 NM_198124	3423305	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	3483053	-	NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AL713645|SYBU|55638|syntabulin (syntaxin-interacting)##AB195676|SYBU|55638|syntabulin (syntaxin-interacting)##AB195677|SYBU|55638|syntabulin (syntaxin-interacting)##AB195678|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)##NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3	0.297188	CTCF.p2:7:0.297
chrX	111885717	111885826	reg1018047.p1	7.756	+	AK128465 NM_001004308	-559519	+	AF054568 NM_012471	-559768	-	BC034811 NM_001195577	-760647	+	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	37568	-	AB384557 AY987378 NM_001113490	180582	-	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	198291	-	AK128465|ZCCHC16|340595|zinc finger, CCHC domain containing 16##NM_001004308|ZCCHC16|340595|zinc finger, CCHC domain containing 16##AF054568|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##NM_012471|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##BC034811|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195577|LOC100329135|100329135|uncharacterized LOC100329135##BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin	0.65383	CTCF.p2:-7:0.654
chr6	16764938	16765074	reg1018769.p1	7.755	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	-3309	-	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-526155	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-621696	+	NM_001190766	337482	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	516848	+	NM_001143941	517288	+	BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24##NM_001143941|RBM24|221662|RNA binding motif protein 24	0.032387	
chr7	98062651	98062765	reg1000038.p1	7.755	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-32275	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-32414	-	TSC_hg19_v1_chr7_-_98015920 D28374	-46794	-	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	184028	+	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	404822	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	404919	-	NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##D28374|RPS3A|6189|ribosomal protein S3A##NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130	1.446909	CTCF.p2:41:0.703
chrX	102719809	102719920	reg1017104.p2	7.755	+	AF187064 M38188 NM_014380	-87756	+	TSC_hg19_v1_chrX_+_102631465 AK315371 AK057859 BC051713 AY833562 BC003190	-88401	+	NM_206915 NM_206917 TSC_hg19_v1_chrX_+_102631313	-88564	+	AF422143 NM_080879	54552	-	TSC_hg19_v1_chrX_+_102840485 NM_001006935 NM_001006937 NM_024863 AL833640 AK024827 AK225117 Z36792 AK093021 AX747862 AF271783 AY885169 BC012296	120591	+	BC008703 NM_001006933 NM_032926 BC007622 TSC_hg19_v1_chrX_+_102862898 AK098494 AF163263	143005	+	AF187064|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##M38188|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##NM_014380|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AK315371|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AK057859|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##BC051713|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AY833562|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##BC003190|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##NM_206915|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##NM_206917|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AF422143|RAB40A|142684|RAB40A, member RAS oncogene family##NM_080879|RAB40A|142684|RAB40A, member RAS oncogene family##NM_001006935|TCEAL4|79921|transcription elongation factor A (SII)-like 4##NM_001006937|TCEAL4|79921|transcription elongation factor A (SII)-like 4##NM_024863|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AL833640|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AK024827|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AK225117|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AK093021|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AF271783|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AY885169|TCEAL4|79921|transcription elongation factor A (SII)-like 4##BC012296|TCEAL4|79921|transcription elongation factor A (SII)-like 4##BC008703|TCEAL3|85012|transcription elongation factor A (SII)-like 3##NM_001006933|TCEAL3|85012|transcription elongation factor A (SII)-like 3##NM_032926|TCEAL3|85012|transcription elongation factor A (SII)-like 3##BC007622|TCEAL3|85012|transcription elongation factor A (SII)-like 3##AK098494|TCEAL3|85012|transcription elongation factor A (SII)-like 3##AF163263|TCEAL3|85012|transcription elongation factor A (SII)-like 3	0.0	
chr17	39705228	39705340	reg1006655.p1	7.754	+	TSC_hg19_v1_chr17_-_39684642 NM_002276	-20645	-	CU679705 DQ892179 DQ895373 AB527586 Y00503 BC084574 BC002539 BC007628 BC010409 TSC_hg19_v1_chr17_-_39684561 AK313261 BC067744	-20754	-	BT007261 CU678086 DQ892990 DQ896238 AB527603 BC110649 BC002641 X07696 TSC_hg19_v1_chr17_-_39675141 AK304059 NM_002275	-30111	-	BC121170 NM_000226 S69510 Z29074	23022	-	BT007186 AB527765 DQ890733 DQ892997 DQ893905 BC042437 BC002690 BC019097 BC094830 AK309280 NM_000526	37831	-	S79867 DQ891307 DQ896818 AF061812 BC039169 AK290853 AK309296 AK309278 NM_005557	63724	-	NM_002276|KRT19|3880|keratin 19##DQ892179|KRT19|3880|keratin 19##DQ895373|KRT19|3880|keratin 19##Y00503|KRT19|3880|keratin 19##BC084574|KRT19|3880|keratin 19##BC002539|KRT19|3880|keratin 19##BC007628|KRT19|3880|keratin 19##BC010409|KRT19|3880|keratin 19##AK313261|KRT19|3880|keratin 19##BC067744|KRT19|3880|keratin 19##BT007261|KRT15|3866|keratin 15##DQ892990|KRT15|3866|keratin 15##DQ896238|KRT15|3866|keratin 15##BC110649|KRT15|3866|keratin 15##BC002641|KRT15|3866|keratin 15##X07696|KRT15|3866|keratin 15##AK304059|KRT15|3866|keratin 15##NM_002275|KRT15|3866|keratin 15##BC121170|KRT9|3857|keratin 9##NM_000226|KRT9|3857|keratin 9##S69510|KRT9|3857|keratin 9##Z29074|KRT9|3857|keratin 9##BT007186|KRT14|3861|keratin 14##DQ890733|KRT14|3861|keratin 14##DQ892997|KRT14|3861|keratin 14##DQ893905|KRT14|3861|keratin 14##BC042437|KRT14|3861|keratin 14##BC002690|KRT14|3861|keratin 14##BC019097|KRT14|3861|keratin 14##BC094830|KRT14|3861|keratin 14##NM_000526|KRT14|3861|keratin 14##S79867|KRT16|3868|keratin 16##DQ891307|KRT16|3868|keratin 16##DQ896818|KRT16|3868|keratin 16##AF061812|KRT16|3868|keratin 16##BC039169|KRT16|3868|keratin 16##AK290853|KRT16|3868|keratin 16##NM_005557|KRT16|3868|keratin 16	0.283158	CTCF.p2:-4:0.283
chr4	182490827	182490952	reg1017760.p2	7.754	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-4127246	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-4127296	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-4127348	-	TSC_hg19_v1_chr4_+_183065111 AK308489	574236	+	NM_001080477 HE578284 HE578285	754265	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	1347641	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.901387	CTCF.p2:2:0.901
chr9	19085425	19085552	reg1017518.p1	7.754	+	AK313023 TSC_hg19_v1_chr9_+_19049424 X90529 CU675403	-35948	+	TSC_hg19_v1_chr9_+_19049420 BC006433	-36068	+	TSC_hg19_v1_chr9_+_19049413 U41654	-36076	+	AB527315 AM393468 BC113981 BC114492 TSC_hg19_v1_chr9_-_19102891	17282	-	AL832495 BC026178 TSC_hg19_v1_chr9_-_19102903 AF537091 AK056458 NM_017645	17413	-	TSC_hg19_v1_chr9_-_19102926 AF533709	17521	-	AK313023|RRAGA|10670|Ras-related GTP binding A##X90529|RRAGA|10670|Ras-related GTP binding A##BC006433|RRAGA|10670|Ras-related GTP binding A##U41654|RRAGA|10670|Ras-related GTP binding A##AM393468|HAUS6|54801|HAUS augmin-like complex, subunit 6##BC113981|HAUS6|54801|HAUS augmin-like complex, subunit 6##BC114492|HAUS6|54801|HAUS augmin-like complex, subunit 6##AL832495|HAUS6|54801|HAUS augmin-like complex, subunit 6##BC026178|HAUS6|54801|HAUS augmin-like complex, subunit 6##AF537091|HAUS6|54801|HAUS augmin-like complex, subunit 6##AK056458|HAUS6|54801|HAUS augmin-like complex, subunit 6##NM_017645|HAUS6|54801|HAUS augmin-like complex, subunit 6##AF533709|HAUS6|54801|HAUS augmin-like complex, subunit 6	0.984231	CTCF.p2:11:0.984
chr16	73990626	73990734	reg1017973.p2	7.753	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-898094	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-908459	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-998975	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	340013	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	340091	+	TSC_hg19_v1_chr16_-_74401811 AK124154	411132	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.867172	CTCF.p2:6:0.867
chr2	124751432	124751539	reg1017477.p1	7.753	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-2238248	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-2257020	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-2343840	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	31379	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	2662222	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	2662307	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.857259	CTCF.p2:10:0.857
chr2	181468947	181469072	reg1020552.p1	7.753	+	BC031216 NM_020943 TSC_hg19_v1_chr2_-_180871834 AK025635 BC057826	-597195	-	TSC_hg19_v1_chr2_-_180726110 NM_152520	-742844	-	BC092423 TSC_hg19_v1_chr2_-_180726080	-742936	-	TSC_hg19_v1_chr2_+_181845341 NM_182678 NM_006357	376216	+	TSC_hg19_v1_chr2_+_181845369 BC092407	376361	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	376634	+	BC031216|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##NM_020943|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##AK025635|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##BC057826|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##NM_152520|ZNF385B|151126|zinc finger protein 385B##BC092423|ZNF385B|151126|zinc finger protein 385B##NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	0.010028	
chr20	16784733	16784880	reg1019376.p1	7.752	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	-55785	+	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	-74143	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	-230793	-	BC040546 NM_001201528	421945	+	NM_001201529 NM_002594 TSC_hg19_v1_chr20_+_17207617	422804	+	BC001905 TSC_hg19_v1_chr20_+_17207673	422865	+	BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##BC040546|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201528|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201529|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	0.967365	CTCF.p2:-25:0.967
chr4	103220916	103221040	reg1016414.p1	7.752	+	NM_001083907 TSC_hg19_v1_chr4_+_102734998 AK000713	-485970	+	TSC_hg19_v1_chr4_+_102711886 BC032241 AK292133 AL834291 EU051376 AB587395	-509043	+	NM_001127507 NM_017935 TSC_hg19_v1_chr4_+_102711808	-509182	+	AK027652 NM_001135148	24490	-	CU680230 DQ892212 DQ895407 TSC_hg19_v1_chr4_-_103265863	44890	-	TSC_hg19_v1_chr4_-_103266365 AB040120 NM_022154 AK304274	45348	-	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##BC032241|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK292133|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AL834291|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##EU051376|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_001127507|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_017935|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK027652|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_001135148|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##DQ892212|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##DQ895407|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	0.035168	
chr4	23719309	23719446	reg1018292.p1	7.752	+	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	-1024785	+	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	-1201823	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	-1768993	-	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	172276	-	AF279891 TSC_hg19_v1_chr4_-_24586127	866699	-	TSC_hg19_v1_chr4_-_24586154 AK303506 BC035974	866783	-	BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##NM_147182|KCNIP4|80333|Kv channel interacting protein 4##AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.559394	CTCF.p2:6:0.559
chr1	160518055	160518233	reg1016181.p1	7.751	+	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	-25115	-	NM_020335 TSC_hg19_v1_chr1_+_160370394	-147765	+	M96739 AK313700 NM_005598 BC013789	-181280	+	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	31103	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	31144	-	AK314244 NM_003037 BC012602	98919	-	AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1	0.0	
chr1	155474129	155474264	reg1019632.p1	7.750	+	AK298730 NM_014328 AK093777 AX748300 BC001045 AK307736 TSC_hg19_v1_chr1_+_155294297 AK074485 AB026894 AK074982 BC028055 BC004293 BX640612	-179904	+	TSC_hg19_v1_chr1_-_155293939 BC080538 NM_001039517 BC062571	-180254	-	BC052277 NM_001105205	-180469	+	AF257305 TSC_hg19_v1_chr1_-_155532251	58010	-	AB037841 AB209068 NM_018489 TSC_hg19_v1_chr1_-_155532387	58171	-	TSC_hg19_v1_chr1_-_155532562 AK307595	58385	-	AK298730|RUSC1|23623|RUN and SH3 domain containing 1##NM_014328|RUSC1|23623|RUN and SH3 domain containing 1##AK093777|RUSC1|23623|RUN and SH3 domain containing 1##BC001045|RUSC1|23623|RUN and SH3 domain containing 1##AK307736|RUSC1|23623|RUN and SH3 domain containing 1##AK074485|RUSC1|23623|RUN and SH3 domain containing 1##AB026894|RUSC1|23623|RUN and SH3 domain containing 1##AK074982|RUSC1|23623|RUN and SH3 domain containing 1##BC028055|RUSC1|23623|RUN and SH3 domain containing 1##BC004293|RUSC1|23623|RUN and SH3 domain containing 1##BX640612|RUSC1|23623|RUN and SH3 domain containing 1##BC080538|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)##NM_001039517|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)##BC062571|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)##BC052277|RUSC1|23623|RUN and SH3 domain containing 1##NM_001105205|RUSC1|23623|RUN and SH3 domain containing 1##AF257305|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)##AB037841|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)##AB209068|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)##NM_018489|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)##AK307595|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)	0.72211	CTCF.p2:4:0.722
chr17	27176421	27176561	reg1021058.p2	7.750	+	BC021228 TSC_hg19_v1_chr17_-_27169811 BX647766 AK299477 AK001562 AK057665 NM_001077498 NM_018182	-6701	-	TSC_hg19_v1_chr17_-_27139467 AK095569	-37044	-	TSC_hg19_v1_chr17_+_27071025 NM_004295 BC001769 X80200 AK300804 AY937222 AY937223 AY937224 AY937225 AB529167 DQ892825 DQ896071 CU674876 AF082185	-105422	+	TSC_hg19_v1_chr17_+_27182033 AB049388 AK023342 AY007435 BX537542 BC019094 NM_005702 CU676380 DQ892626 DQ895866 AF082657 AF082658	5532	+	M60922 CU678570 AB528533 BC003683 TSC_hg19_v1_chr17_-_27224641	48117	-	TSC_hg19_v1_chr17_-_27224717 NM_004475	48221	-	BC021228|C17orf63|55731|chromosome 17 open reading frame 63##BX647766|C17orf63|55731|chromosome 17 open reading frame 63##AK299477|C17orf63|55731|chromosome 17 open reading frame 63##AK001562|C17orf63|55731|chromosome 17 open reading frame 63##AK057665|C17orf63|55731|chromosome 17 open reading frame 63##NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63##NM_018182|C17orf63|55731|chromosome 17 open reading frame 63##AK095569|C17orf63|55731|chromosome 17 open reading frame 63##NM_004295|TRAF4|9618|TNF receptor-associated factor 4##BC001769|TRAF4|9618|TNF receptor-associated factor 4##X80200|TRAF4|9618|TNF receptor-associated factor 4##AK300804|TRAF4|9618|TNF receptor-associated factor 4##AY937222|TRAF4|9618|TNF receptor-associated factor 4##AY937223|TRAF4|9618|TNF receptor-associated factor 4##AY937224|TRAF4|9618|TNF receptor-associated factor 4##DQ892825|TRAF4|9618|TNF receptor-associated factor 4##DQ896071|TRAF4|9618|TNF receptor-associated factor 4##AF082185|TRAF4|9618|TNF receptor-associated factor 4##AB049388|ERAL1|26284|Era G-protein-like 1 (E. coli)##AK023342|ERAL1|26284|Era G-protein-like 1 (E. coli)##AY007435|ERAL1|26284|Era G-protein-like 1 (E. coli)##BX537542|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC019094|ERAL1|26284|Era G-protein-like 1 (E. coli)##NM_005702|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ892626|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ895866|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082657|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082658|ERAL1|26284|Era G-protein-like 1 (E. coli)##M60922|FLOT2|2319|flotillin 2##BC003683|FLOT2|2319|flotillin 2##NM_004475|FLOT2|2319|flotillin 2	0.278653	CTCF.p2:-20:0.279
chr19	11404692	11404872	reg1000429.p2	7.750	+	AB384597 TSC_hg19_v1_chr19_-_11373144 AB037816 BC146786 BC095483 NM_020812	-31644	-	TSC_hg19_v1_chr19_+_11350294 NM_018687 AY358356	-54486	+	TSC_hg19_v1_chr19_-_11308465 AK000011 AK225038	-96320	-	AF133424 NM_012466 BC029908	2051	+	AF081353 TSC_hg19_v1_chr19_-_11450305 BC016471 AK313538 NM_004283	45518	-	BC008365 BC091472 AY358949 TSC_hg19_v1_chr19_-_11456946 AK291979 NM_001145416 NM_033408 NM_198536	52151	-	AB037816|DOCK6|57572|dedicator of cytokinesis 6##BC146786|DOCK6|57572|dedicator of cytokinesis 6##BC095483|DOCK6|57572|dedicator of cytokinesis 6##NM_020812|DOCK6|57572|dedicator of cytokinesis 6##NM_018687|C19orf80|55908|chromosome 19 open reading frame 80##AY358356|C19orf80|55908|chromosome 19 open reading frame 80##AK000011|KANK2|25959|KN motif and ankyrin repeat domains 2##AK225038|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_012466|TSPAN16|26526|tetraspanin 16##BC029908|TSPAN16|26526|tetraspanin 16##AF081353|RAB3D|9545|RAB3D, member RAS oncogene family##BC016471|RAB3D|9545|RAB3D, member RAS oncogene family##AK313538|RAB3D|9545|RAB3D, member RAS oncogene family##NM_004283|RAB3D|9545|RAB3D, member RAS oncogene family##BC008365|TMEM205|374882|transmembrane protein 205##BC091472|TMEM205|374882|transmembrane protein 205##AY358949|TMEM205|374882|transmembrane protein 205##AK291979|TMEM205|374882|transmembrane protein 205##NM_001145416|TMEM205|374882|transmembrane protein 205##NM_033408|TMEM205|374882|transmembrane protein 205##NM_198536|TMEM205|374882|transmembrane protein 205	0.0	
chr2	241614956	241615058	reg1017421.p1	7.750	+	AK314002 NM_005301	-50346	+	TSC_hg19_v1_chr2_+_241544846 NM_001195381 NM_001195382 AK172786 AK290256	-70167	+	TSC_hg19_v1_chr2_+_241526150 NM_023083 NM_023085 AK300279 AF089088 AK074807 BC004260 BC007553 AF089095 AB058748 AF089090 AF089091 AF089092 AF089093 AF089094 AF089096 AB590370 DQ893519 DQ896503	-88778	+	BC157895 BC171912 BC139748 NM_001102467 BC041460	7308	-	AB040748 BC041460 NM_198998	16254	+	BC064906 TSC_hg19_v1_chr2_-_241759637 AK307119 AB621817 AB210029 AB290172 NM_001244008 NM_004321	144668	-	AK314002|GPR35|2859|G protein-coupled receptor 35##NM_005301|GPR35|2859|G protein-coupled receptor 35##NM_001195381|GPR35|2859|G protein-coupled receptor 35##NM_001195382|GPR35|2859|G protein-coupled receptor 35##AK172786|GPR35|2859|G protein-coupled receptor 35##AK290256|GPR35|2859|G protein-coupled receptor 35##NM_023083|CAPN10|11132|calpain 10##NM_023085|CAPN10|11132|calpain 10##AK300279|CAPN10|11132|calpain 10##AF089088|CAPN10|11132|calpain 10##AK074807|CAPN10|11132|calpain 10##BC004260|CAPN10|11132|calpain 10##BC007553|CAPN10|11132|calpain 10##AB058748|CAPN10|11132|calpain 10##AF089090|CAPN10|11132|calpain 10##AF089091|CAPN10|11132|calpain 10##AF089092|CAPN10|11132|calpain 10##AF089093|CAPN10|11132|calpain 10##AF089094|CAPN10|11132|calpain 10##AF089096|CAPN10|11132|calpain 10##DQ893519|CAPN10|11132|calpain 10##DQ896503|CAPN10|11132|calpain 10##BC157895|AQP12B|653437|aquaporin 12B##BC171912|AQP12B|653437|aquaporin 12B##BC139748|AQP12B|653437|aquaporin 12B##NM_001102467|AQP12B|653437|aquaporin 12B##BC041460|AQP12B|653437|aquaporin 12B##AB040748|AQP12A|375318|aquaporin 12A##BC041460|AQP12B|653437|aquaporin 12B##NM_198998|AQP12A|375318|aquaporin 12A##BC064906|KIF1A|547|kinesin family member 1A##AK307119|KIF1A|547|kinesin family member 1A##AB210029|KIF1A|547|kinesin family member 1A##AB290172|KIF1A|547|kinesin family member 1A##NM_001244008|KIF1A|547|kinesin family member 1A##NM_004321|KIF1A|547|kinesin family member 1A	0.900599	CTCF.p2:-6:0.901
chr19	21190995	21191119	reg1018578.p1	7.749	+	NM_003429 BC068066 TSC_hg19_v1_chr19_+_21106090 U35376 M61866 BC008688	-84971	+	BC067843 TSC_hg19_v1_chr19_+_20959109	-231948	+	BC150651 AK096221 CR749233 TSC_hg19_v1_chr19_-_20844378 BC007116 BX648764 AK131567 BC107803 NM_001076675 NM_145297	-346695	-	AK290475 NM_001172671 NM_025189 TSC_hg19_v1_chr19_+_21203432 AK023721 AX721141 AY269787 BC111776	12424	+	NM_182515 AL834415 TSC_hg19_v1_chr19_+_21264973 AK056006 BC022527 BC037782 BC050468 BC064985	73946	+	BX647597 TSC_hg19_v1_chr19_+_21324836 AK308127 NM_133473 AK293072 AB075849 BC065374 BC040506	133799	+	NM_003429|ZNF85|7639|zinc finger protein 85##BC068066|ZNF85|7639|zinc finger protein 85##U35376|ZNF85|7639|zinc finger protein 85##M61866|ZNF85|7639|zinc finger protein 85##BC008688|ZNF85|7639|zinc finger protein 85##AK096221|ZNF626|199777|zinc finger protein 626##CR749233|ZNF626|199777|zinc finger protein 626##BC007116|ZNF626|199777|zinc finger protein 626##BX648764|ZNF626|199777|zinc finger protein 626##BC107803|ZNF626|199777|zinc finger protein 626##NM_001076675|ZNF626|199777|zinc finger protein 626##NM_145297|ZNF626|199777|zinc finger protein 626##AK290475|ZNF430|80264|zinc finger protein 430##NM_001172671|ZNF430|80264|zinc finger protein 430##NM_025189|ZNF430|80264|zinc finger protein 430##AK023721|ZNF430|80264|zinc finger protein 430##AY269787|ZNF430|80264|zinc finger protein 430##BC111776|ZNF430|80264|zinc finger protein 430##NM_182515|ZNF714|148206|zinc finger protein 714##AK056006|ZNF714|148206|zinc finger protein 714##BC022527|ZNF714|148206|zinc finger protein 714##BC037782|ZNF714|148206|zinc finger protein 714##BC050468|ZNF714|148206|zinc finger protein 714##BC064985|ZNF714|148206|zinc finger protein 714##BX647597|ZNF431|170959|zinc finger protein 431##AK308127|ZNF431|170959|zinc finger protein 431##NM_133473|ZNF431|170959|zinc finger protein 431##AK293072|ZNF431|170959|zinc finger protein 431##AB075849|ZNF431|170959|zinc finger protein 431##BC040506|ZNF431|170959|zinc finger protein 431	0.047021	
chr2	138848091	138848195	reg1017710.p2	7.749	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	-126209	+	NM_001080427	-1099682	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-1325027	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	411250	+	TSC_hg19_v1_chr2_+_139259500 AK021919	411347	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	689663	-	NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2	0.0	
chr8	30524503	30524623	reg1014897.p2	7.749	+	S67861 TSC_hg19_v1_chr8_-_30515718 X63469 BC030572 BC001775 NM_002095	-8827	-	NM_001206847	-28447	+	NM_001008710 NM_001008711 NM_001008712 NM_006867 AK304858 D84107 D84108 D84109 D84110 TSC_hg19_v1_chr8_+_30242056 BC003608	-282554	+	BC035691 TSC_hg19_v1_chr8_-_30585320 X15722 AB519179 AB519180 AB519181 AF228704 CU686724	60723	-	BC069244 TSC_hg19_v1_chr8_-_30585478 NM_000637 NM_001195102 NM_001195103 NM_001195104	60903	-	TSC_hg19_v1_chr8_+_30601674 NM_005671 AK296600 BC020694 D83767 CU676648 AY302140	77123	+	S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341##NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing##NM_006867|RBPMS|11030|RNA binding protein with multiple splicing##AK304858|RBPMS|11030|RNA binding protein with multiple splicing##D84107|RBPMS|11030|RNA binding protein with multiple splicing##D84108|RBPMS|11030|RNA binding protein with multiple splicing##D84109|RBPMS|11030|RNA binding protein with multiple splicing##D84110|RBPMS|11030|RNA binding protein with multiple splicing##BC003608|RBPMS|11030|RNA binding protein with multiple splicing##BC035691|GSR|2936|glutathione reductase##X15722|GSR|2936|glutathione reductase##AB519179|GSR|2936|glutathione reductase##AB519180|GSR|2936|glutathione reductase##AB519181|GSR|2936|glutathione reductase##AF228704|GSR|2936|glutathione reductase##BC069244|GSR|2936|glutathione reductase##NM_000637|GSR|2936|glutathione reductase##NM_001195102|GSR|2936|glutathione reductase##NM_001195103|GSR|2936|glutathione reductase##NM_001195104|GSR|2936|glutathione reductase##NM_005671|UBXN8|7993|UBX domain protein 8##AK296600|UBXN8|7993|UBX domain protein 8##BC020694|UBXN8|7993|UBX domain protein 8##D83767|UBXN8|7993|UBX domain protein 8##AY302140|UBXN8|7993|UBX domain protein 8	0.992112	CTCF.p2:-19:0.992
chr15	66990843	66990973	reg1020935.p1	7.748	+	TSC_hg19_v1_chr15_+_66874506 BC016970	-116392	+	AB527178 AY358729 NM_207338	-133139	-	AK122787 TSC_hg19_v1_chr15_+_66797663 AK291048 BC090041 BC036900	-193250	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	3766	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	4651	+	NM_001142861 U59914	10021	+	AY358729|LCTL|197021|lactase-like##NM_207338|LCTL|197021|lactase-like##AK122787|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AK291048|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC090041|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC036900|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6	0.256475	CTCF.p2:-22:0.256
chr6	151727311	151727425	reg1019002.p1	7.748	+	TSC_hg19_v1_chr6_-_151712650 BC020172 NM_020861 AK092886 AX747790 AK291942	-14658	-	TSC_hg19_v1_chr6_+_151646810 NM_144497 AK307739 BC070151 AB003476 BC117679 BC117680	-80591	+	TSC_hg19_v1_chr6_+_151561677 BC000188 BC022814 BC015830 AB384670 AF001504	-165630	+	TSC_hg19_v1_chr6_-_151773262 BC119683 AK000634 BC106065 AK292339 NM_017909	45890	-	AK022972 NM_024573	46053	+	AK298490 TSC_hg19_v1_chr6_+_151773653 AK310840 AL110241 BC011348 CU679902	46274	+	BC020172|ZBTB2|57621|zinc finger and BTB domain containing 2##NM_020861|ZBTB2|57621|zinc finger and BTB domain containing 2##AK092886|ZBTB2|57621|zinc finger and BTB domain containing 2##AK291942|ZBTB2|57621|zinc finger and BTB domain containing 2##NM_144497|AKAP12|9590|A kinase (PRKA) anchor protein 12##AK307739|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC070151|AKAP12|9590|A kinase (PRKA) anchor protein 12##AB003476|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC117679|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC117680|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC000188|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC022814|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC015830|AKAP12|9590|A kinase (PRKA) anchor protein 12##AF001504|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC119683|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK000634|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##BC106065|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK292339|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##NM_017909|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK022972|C6orf211|79624|chromosome 6 open reading frame 211##NM_024573|C6orf211|79624|chromosome 6 open reading frame 211##AK298490|C6orf211|79624|chromosome 6 open reading frame 211##AK310840|C6orf211|79624|chromosome 6 open reading frame 211##AL110241|C6orf211|79624|chromosome 6 open reading frame 211##BC011348|C6orf211|79624|chromosome 6 open reading frame 211	0.912906	CTCF.p2:1:0.913
chr8	7812438	7812579	reg1018392.p2	7.748	+	AK292586 NM_001193630	-28650	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-60304	+	AF295370 AJ237673 NM_018661 AB037972 AB590071 AF217245 AF516673	-73583	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	273634	+	TSC_hg19_v1_chr8_-_8175862 AF075060	363380	-	AK122582 NM_001080826	426714	-	AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF295370|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2	0.992615	CTCF.p2:-10:0.977
chr10	82295732	82295866	reg1016184.p2	7.747	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-81695	+	TSC_hg19_v1_chr10_+_82214071 AF311903	-81728	+	AK074558 AK295321 AL136638 TSC_hg19_v1_chr10_+_82214066	-81731	+	AK123885 NM_207372	1858	+	AK123978 NM_001145719	4775	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	1339283	+	BC002920|TSPAN14|81619|tetraspanin 14##AF311903|TSPAN14|81619|tetraspanin 14##AK074558|TSPAN14|81619|tetraspanin 14##AK295321|TSPAN14|81619|tetraspanin 14##AL136638|TSPAN14|81619|tetraspanin 14##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3	0.434288	CTCF.p2:-15:0.434
chr10	85768667	85768793	reg1019279.p1	7.747	+	DQ857894 NM_001165973	-2131288	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-2133648	+	AK123978 NM_001145719	-3468156	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	130527	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	163062	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	164829	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.999623	CTCF.p2:9:1.000
chr1	116220347	116220445	reg1016126.p2	7.747	+	AB057596 NM_001172412	-35147	+	NM_001172411 NM_138959 BC065272 AF481859	-35804	+	BC032517 NM_002506 X52599	-339543	-	CU692536 DQ893219 DQ896548 D55655 AK225959 TSC_hg19_v1_chr1_-_116311307	90838	-	TSC_hg19_v1_chr1_-_116311336 AK295502 BC022288 AK313041	90955	-	AK129891 TSC_hg19_v1_chr1_-_116311410 NM_001232 AK293595	91020	-	AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##DQ893219|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ896548|CASQ2|845|calsequestrin 2 (cardiac muscle)##D55655|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK225959|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK295502|CASQ2|845|calsequestrin 2 (cardiac muscle)##BC022288|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK313041|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK129891|CASQ2|845|calsequestrin 2 (cardiac muscle)##NM_001232|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK293595|CASQ2|845|calsequestrin 2 (cardiac muscle)	0.103614	
chr16	72434305	72434469	reg1017734.p1	7.747	+	AK122925 NM_001160213	-228039	-	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	-228344	-	NM_001142318	-306173	-	TSC_hg19_v1_chr16_+_72699031 AK021563	264677	+	TSC_hg19_v1_chr16_-_72991733 BC029653	557318	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	647834	-	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001142318|TXNL4B|54957|thioredoxin-like 4B##BC029653|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3	0.298762	CTCF.p2:-14:0.299
chr19	39528941	39529035	reg1017150.p2	7.747	+	TSC_hg19_v1_chr19_-_39523185 BC030060 AF436061 BC014527 NM_178820	-5755	-	CU677033 TSC_hg19_v1_chr19_-_39522905	-6089	-	BC012385 AF386743 NM_024907	-62654	-	AK131245 NM_001004318	45956	+	TSC_hg19_v1_chr19_+_39616436 AK294586 NM_001014831 NM_001014832 NM_001014834 NM_001014835 NM_005884 AK293517 AK291839 AX775863 AX775865 AK300632 BC002921 AX775871 BC034511 AK304651 BC011368 AL834236 AX775867 AX775869 BC025282 AF005046 AB032968	87457	+	BC092493 AK123941 BC067874 NM_001001414 TSC_hg19_v1_chr19_+_39687603	158614	+	BC030060|FBXO27|126433|F-box protein 27##AF436061|FBXO27|126433|F-box protein 27##BC014527|FBXO27|126433|F-box protein 27##NM_178820|FBXO27|126433|F-box protein 27##BC012385|FBXO17|115290|F-box protein 17##AF386743|FBXO17|115290|F-box protein 17##NM_024907|FBXO17|115290|F-box protein 17##AK131245|PAPL|390928|iron/zinc purple acid phosphatase-like protein##NM_001004318|PAPL|390928|iron/zinc purple acid phosphatase-like protein##AK294586|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014831|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014832|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014834|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_001014835|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##NM_005884|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK293517|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK291839|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775863|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775865|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK300632|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC002921|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775871|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC034511|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AK304651|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC011368|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AL834236|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775867|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AX775869|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC025282|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AF005046|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##AB032968|PAK4|10298|p21 protein (Cdc42/Rac)-activated kinase 4##BC092493|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##AK123941|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##BC067874|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##NM_001001414|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)	0.119144	
chr4	120550174	120550289	reg1018225.p1	7.747	+	D89094 TSC_hg19_v1_chr4_-_120550167	-69	-	AB527373 AM393036 AM393270 AM393448 AK290189 BC126233 AJ004865 AF155192 TSC_hg19_v1_chr4_-_120549960 AF043731 NM_001083	-328	-	TSC_hg19_v1_chr4_-_120549121 AF155194 NM_033437	-1055	-	EU831987 EU832080 AB528692 AF394735 TSC_hg19_v1_chr4_-_120987954 U65410 BC070283 AJ000186 BC005945 BC000356 U31278 AK223433 AK313827 AK298228 NM_002358	437723	-	TSC_hg19_v1_chr4_-_121843992 AB464059 BC121037 BC121038 AK314293 AK310958 AF272897 AK056352 NM_018699 BC066942	1293764	-	BC019351 AK289615 NM_024574 TSC_hg19_v1_chr4_-_121993690	1443399	-	AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##EU831987|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##EU832080|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF394735|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC070283|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AJ000186|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC005945|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC000356|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK223433|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK313827|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK298228|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##NM_002358|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC121037|PRDM5|11107|PR domain containing 5##BC121038|PRDM5|11107|PR domain containing 5##AK314293|PRDM5|11107|PR domain containing 5##AK310958|PRDM5|11107|PR domain containing 5##AF272897|PRDM5|11107|PR domain containing 5##AK056352|PRDM5|11107|PR domain containing 5##NM_018699|PRDM5|11107|PR domain containing 5##BC066942|PRDM5|11107|PR domain containing 5##BC019351|NDNF|79625|neuron-derived neurotrophic factor##AK289615|NDNF|79625|neuron-derived neurotrophic factor##NM_024574|NDNF|79625|neuron-derived neurotrophic factor	0.103736	
chr6	141998876	141998980	reg1016994.p1	7.747	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-2303144	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-2303167	-	NM_001168389 NM_001168388	-2303505	-	BC095542 GU727635 M73482 NM_002511	410936	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	469462	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	469478	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.75552	CTCF.p2:9:0.756
chr11	126944142	126944266	reg1017203.p1	7.746	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-70899	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-73479	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-73544	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	1447759	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	1447930	-	BX640634 NM_001143820	1513248	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.043192	
chr17	62844071	62844196	reg1020350.p1	7.746	+	TSC_hg19_v1_chr17_-_62833274 AK308180 AK303621 AL833315	-10863	-	TSC_hg19_v1_chr17_-_62833261 BC034693 BC041324	-10879	-	TSC_hg19_v1_chr17_-_62833238 AK301174 AK304173	-10900	-	AB384498 TSC_hg19_v1_chr17_-_62893379 BC043145 BC048966	49258	-	AB011135 NM_199340	70769	-	TSC_hg19_v1_chr17_-_62915587 AK294371	71463	-	AK308180|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene##AK303621|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene##AL833315|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene##BC034693|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene##AK301174|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene##AK304173|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene##BC043145|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC048966|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3##NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3	0.855786	CTCF.p2:-9:0.856
chr3	16969125	16969252	reg1018349.p1	7.746	+	AB029015 NM_001144382	-42737	+	U65918 U66726 U66078 BC027595 NM_001351	-322222	-	BX648638 AK303026 NM_001190811	-322918	-	BC036392 NM_015184	5393	+	AK310539 NM_001134381	772323	-	D86965 NM_014744	813210	-	AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like##BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5	0.90823	CTCF.p2:-10:0.908
chr5	147237221	147237375	reg1018053.p1	7.746	+	TSC_hg19_v1_chr5_-_147211236 NM_003122	-26051	-	DQ893613 DQ896842 AB464195 BC025790 TSC_hg19_v1_chr5_-_147211177 Y00705	-26128	-	TSC_hg19_v1_chr5_-_147162292 AK299724	-74993	-	BC024232 NM_054023 AF439545 AY358979 AF313455 AB590291 DQ893093 DQ896365	21021	+	AY358656 AK289403 BC021680 NM_206966	48784	-	DQ149927 DQ149928 DQ149929 NM_001127698 NM_001127699 NM_006846 AK299455 AK307588 AK309753 AK301660 AK307648 AJ228139 AB463250	206272	+	NM_003122|SPINK1|6690|serine peptidase inhibitor, Kazal type 1##DQ893613|SPINK1|6690|serine peptidase inhibitor, Kazal type 1##DQ896842|SPINK1|6690|serine peptidase inhibitor, Kazal type 1##BC025790|SPINK1|6690|serine peptidase inhibitor, Kazal type 1##Y00705|SPINK1|6690|serine peptidase inhibitor, Kazal type 1##AK299724|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##BC024232|SCGB3A2|117156|secretoglobin, family 3A, member 2##NM_054023|SCGB3A2|117156|secretoglobin, family 3A, member 2##AF439545|SCGB3A2|117156|secretoglobin, family 3A, member 2##AY358979|SCGB3A2|117156|secretoglobin, family 3A, member 2##AF313455|SCGB3A2|117156|secretoglobin, family 3A, member 2##DQ893093|SCGB3A2|117156|secretoglobin, family 3A, member 2##DQ896365|SCGB3A2|117156|secretoglobin, family 3A, member 2##AY358656|C5orf46|389336|chromosome 5 open reading frame 46##AK289403|C5orf46|389336|chromosome 5 open reading frame 46##BC021680|C5orf46|389336|chromosome 5 open reading frame 46##NM_206966|C5orf46|389336|chromosome 5 open reading frame 46##DQ149927|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##DQ149928|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##DQ149929|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##NM_001127698|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##NM_001127699|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##NM_006846|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK299455|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK307588|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK309753|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK301660|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AK307648|SPINK5|11005|serine peptidase inhibitor, Kazal type 5##AJ228139|SPINK5|11005|serine peptidase inhibitor, Kazal type 5	0.948171	CTCF.p2:1:0.948
chr5	178594229	178594361	reg1017607.p1	7.745	+	TSC_hg19_v1_chr5_+_178487382 BC063312 AF525463 NM_014594	-106826	+	NM_001136116 TSC_hg19_v1_chr5_+_178450804 BX648737 AK300504	-143486	+	NM_000843	-172172	-	AJ003125 AB587330 TSC_hg19_v1_chr5_-_178772362	178061	-	AK308213 NM_014244 NM_021599 TSC_hg19_v1_chr5_-_178772442	178147	-	TSC_hg19_v1_chr5_+_178977611 AF312367 NM_025158 AF361055	383323	+	BC063312|ZNF354C|30832|zinc finger protein 354C##AF525463|ZNF354C|30832|zinc finger protein 354C##NM_014594|ZNF354C|30832|zinc finger protein 354C##NM_001136116|ZNF879|345462|zinc finger protein 879##BX648737|ZNF879|345462|zinc finger protein 879##AK300504|ZNF879|345462|zinc finger protein 879##NM_000843|GRM6|2916|glutamate receptor, metabotropic 6##AJ003125|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##AK308213|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##NM_014244|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##NM_021599|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##AF312367|RUFY1|80230|RUN and FYVE domain containing 1##NM_025158|RUFY1|80230|RUN and FYVE domain containing 1##AF361055|RUFY1|80230|RUN and FYVE domain containing 1	0.999863	CTCF.p2:-12:1.000
chr16	13310645	13310773	reg1015587.p1	7.744	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-315241	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-412990	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-413058	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	703322	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	854377	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	969809	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.984602	CTCF.p2:35:0.985
chr6_cox_hap2	174251	174384	reg1020364.p1	7.744	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.133535	
chr16	2301614	2301779	reg1017633.p1	7.743	+	TSC_hg19_v1_chr16_-_2301582 BC009631 AB590571 BC000762 BC019316 CU674388 BC002746 BC020228 Z25820 AK291127 NM_001178029 NM_001919	-108	-	BC063710 NM_001374 BC035205	-15228	+	TSC_hg19_v1_chr16_+_2273604 AK290329	-28083	+	TSC_hg19_v1_chr16_-_2317841 BC108316 NM_006711	16167	-	TSC_hg19_v1_chr16_-_2318096 BC001659 BC001838 AF274003 AK289955 AK303100 AK293343	16413	-	TSC_hg19_v1_chr16_-_2318393 AK316132	16696	-	BC009631|ECI1|1632|enoyl-CoA delta isomerase 1##BC000762|ECI1|1632|enoyl-CoA delta isomerase 1##BC019316|ECI1|1632|enoyl-CoA delta isomerase 1##BC002746|ECI1|1632|enoyl-CoA delta isomerase 1##BC020228|ECI1|1632|enoyl-CoA delta isomerase 1##Z25820|ECI1|1632|enoyl-CoA delta isomerase 1##AK291127|ECI1|1632|enoyl-CoA delta isomerase 1##NM_001178029|ECI1|1632|enoyl-CoA delta isomerase 1##NM_001919|ECI1|1632|enoyl-CoA delta isomerase 1##BC063710|DNASE1L2|1775|deoxyribonuclease I-like 2##NM_001374|DNASE1L2|1775|deoxyribonuclease I-like 2##BC035205|DNASE1L2|1775|deoxyribonuclease I-like 2##AK290329|E4F1|1877|E4F transcription factor 1##BC108316|RNPS1|10921|RNA binding protein S1, serine-rich domain##NM_006711|RNPS1|10921|RNA binding protein S1, serine-rich domain##BC001659|RNPS1|10921|RNA binding protein S1, serine-rich domain##BC001838|RNPS1|10921|RNA binding protein S1, serine-rich domain##AF274003|RNPS1|10921|RNA binding protein S1, serine-rich domain##AK289955|RNPS1|10921|RNA binding protein S1, serine-rich domain##AK303100|RNPS1|10921|RNA binding protein S1, serine-rich domain##AK293343|RNPS1|10921|RNA binding protein S1, serine-rich domain##AK316132|RNPS1|10921|RNA binding protein S1, serine-rich domain	0.896414	CTCF.p2:-13:0.896
chr20	34861399	34861518	reg1017988.p1	7.743	+	TSC_hg19_v1_chr20_+_34824402 BC001751 BC019311 NM_015511	-37035	+	TSC_hg19_v1_chr20_+_34824399 AL117419	-37069	+	TSC_hg19_v1_chr20_+_34742659 NM_012156 AB002336	-118793	+	TSC_hg19_v1_chr20_+_34894262 AB023181	32797	+	NM_014902	133985	+	TSC_hg19_v1_chr20_+_35089870 NM_001042486 AK001681	228411	+	BC001751|C20orf4|25980|chromosome 20 open reading frame 4##BC019311|C20orf4|25980|chromosome 20 open reading frame 4##NM_015511|C20orf4|25980|chromosome 20 open reading frame 4##AL117419|C20orf4|25980|chromosome 20 open reading frame 4##NM_012156|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AB002336|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AB023181|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_001042486|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##AK001681|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4	0.996345	CTCF.p2:4:0.996
chr5	23352664	23352796	reg1020199.p1	7.743	+	L33477 NM_004061	-499000	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-499284	-	TSC_hg19_v1_chr5_-_22212879 AK314800	-1139849	-	DQ388610 NM_020227 AK301776	155013	+	NM_006727	1292354	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	3685941	-	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	0.743363	CTCF.p2:-10:0.743
chr6_qbl_hap6	4214788	4214870	reg1013182.p1	7.743	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.982461	CTCF.p2:-7:0.982
chr16	68430578	68430706	reg1018041.p1	7.742	+	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	-85683	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	-85816	-	TSC_hg19_v1_chr16_+_68298430 NM_001076785 NM_003983 CR749291 CR749475 AK310866 BC028216	-132192	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	51839	-	TSC_hg19_v1_chr16_+_68564035 BC040871	133391	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	142556	+	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_001076785|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##NM_003983|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749291|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749475|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK310866|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC028216|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)	0.937426	CTCF.p2:-12:0.937
chr1	68225794	68225975	reg1004026.p1	7.742	+	TSC_hg19_v1_chr1_+_68151094 AB463698 AM393439 DQ893229 DQ896558	-74750	+	TSC_hg19_v1_chr1_+_68150883 AK314991 NM_001199741 NM_001199742 NM_001924 M60974 BC011757 DQ008445 EF581092 EF614238	-74974	+	TSC_hg19_v1_chr1_-_67896101 NM_001018067 NM_001018068 NM_001018069 NM_015640	-329767	-	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	72104	+	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	73226	-	BC005362 U96750 NM_004675	290501	-	AM393439|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ893229|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ896558|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001018067|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018068|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018069|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_015640|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK124028|LOC100289178|100289178|uncharacterized LOC100289178##AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3	0.0	
chr6	146209283	146209382	reg1016767.p1	7.742	+	TSC_hg19_v1_chr6_+_146136030 AK311235	-73294	+	TSC_hg19_v1_chr6_-_146135919 NM_032145	-73410	-	TSC_hg19_v1_chr6_-_146135899 BC024326	-73472	-	TSC_hg19_v1_chr6_-_146285189 AY161136	75859	-	TSC_hg19_v1_chr6_-_146285235 AK075318 AY163808 NM_001042683 NM_173082	75918	-	TSC_hg19_v1_chr6_-_146285558 CR749290	76230	-	AK311235|LOC100507557|100507557|uncharacterized LOC100507557##NM_032145|FBXO30|84085|F-box protein 30##BC024326|FBXO30|84085|F-box protein 30##AY161136|SHPRH|257218|SNF2 histone linker PHD RING helicase##AK075318|SHPRH|257218|SNF2 histone linker PHD RING helicase##AY163808|SHPRH|257218|SNF2 histone linker PHD RING helicase##NM_001042683|SHPRH|257218|SNF2 histone linker PHD RING helicase##NM_173082|SHPRH|257218|SNF2 histone linker PHD RING helicase##CR749290|SHPRH|257218|SNF2 histone linker PHD RING helicase	0.804527	CTCF.p2:9:0.805
chr9	136196296	136196425	reg1018068.p1	7.742	+	NM_020469 TSC_hg19_v1_chr9_-_136150638	-45723	-	AF134412 AF134413 AF134414 AF134415 AF134416 BC069595 BC069605 BC069814 BC111575 DQ139865 FR691751 FR691752 J05175 JN791441 CU686922 AK302203 TSC_hg19_v1_chr9_-_136150618	-45746	-	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	-111740	-	BC003001 BC006197 EU831789 EU831867 TSC_hg19_v1_chr9_-_136203015 BC014878	6640	-	TSC_hg19_v1_chr9_-_136203045 AK054884 NM_006753	6678	-	AK124518 AK126069 TSC_hg19_v1_chr9_-_136214719	18278	-	NM_020469|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134412|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134413|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134414|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134415|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134416|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069595|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069605|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069814|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC111575|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##DQ139865|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691751|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691752|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##J05175|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##JN791441|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AK302203|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B##BC003001|SURF6|6838|surfeit 6##BC006197|SURF6|6838|surfeit 6##EU831789|SURF6|6838|surfeit 6##EU831867|SURF6|6838|surfeit 6##BC014878|SURF6|6838|surfeit 6##AK054884|SURF6|6838|surfeit 6##NM_006753|SURF6|6838|surfeit 6##AK124518|MED22|6837|mediator complex subunit 22##AK126069|MED22|6837|mediator complex subunit 22	0.830069	CTCF.p2:9:0.830
chr12	22488576	22488707	reg1014804.p1	7.741	+	BC117285 BC126162 BC031081 BC046158 AK315340 EU041716 NM_003034 X77922 TSC_hg19_v1_chr12_-_22487789	-961	-	AF271388 TSC_hg19_v1_chr12_+_22199226 AF397212	-289412	+	TSC_hg19_v1_chr12_+_22199207 BC016609 NM_018686 AL832975 AK022927 AK222981	-289469	+	AB385344 AB011100 BC042498 TSC_hg19_v1_chr12_-_22697128 AK299353	208498	-	BC117143 BC143859 BC143860 BC143878 TSC_hg19_v1_chr12_-_22697430 AK295862	208748	-	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	208825	-	BC117285|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC126162|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC031081|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC046158|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AK315340|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##EU041716|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##NM_003034|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##X77922|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##BC016609|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##NM_018686|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AL832975|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK022927|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK222981|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AB011100|KIAA0528|9847|KIAA0528##BC042498|KIAA0528|9847|KIAA0528##AK299353|KIAA0528|9847|KIAA0528##BC117143|KIAA0528|9847|KIAA0528##BC143859|KIAA0528|9847|KIAA0528##BC143860|KIAA0528|9847|KIAA0528##BC143878|KIAA0528|9847|KIAA0528##AK295862|KIAA0528|9847|KIAA0528##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528	0.141257	
chr16	47292903	47293035	reg1019176.p1	7.741	+	TSC_hg19_v1_chr16_-_47177902 AK074937 NM_001201477 NM_018092	-115047	-	AY358718 BC108727 TSC_hg19_v1_chr16_-_47177852 BC098380	-115123	-	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	-285374	-	TSC_hg19_v1_chr16_-_47494975 BC006321 DQ893514 DQ896493 AF503339 AK027596	201896	-	TSC_hg19_v1_chr16_-_47494995 BC024162 NM_030790	202066	-	TSC_hg19_v1_chr16_-_47495158 AF212247 AK301908	202188	-	AK074937|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_001201477|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_018092|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##AY358718|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC108727|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC098380|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC006321|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ893514|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ896493|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF503339|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK027596|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##BC024162|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##NM_030790|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF212247|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK301908|ITFG1|81533|integrin alpha FG-GAP repeat containing 1	0.0	
chr17	15572963	15573080	reg1019507.p1	7.741	+	BC001564 CR457136 EU446937 HQ257965 AK002035 AK314557 TSC_hg19_v1_chr17_-_15554961 AB209899	-18134	-	AK057407 NM_006382	-50004	-	TSC_hg19_v1_chr17_-_15466802 BC011952 AK303475 AB074181 AK310363 NM_001135036 NM_001204478 NM_145301	-106163	-	BC053514 BC067096 NM_006470	13171	-	NM_001130842 NM_020652 AK296547 TSC_hg19_v1_chr17_+_15603030	29942	+	AK315062 BC015730 BC025260 AK092259 AB058777 TSC_hg19_v1_chr17_+_15603063	30034	+	BC001564|TRIM16|10626|tripartite motif containing 16##CR457136|TRIM16|10626|tripartite motif containing 16##EU446937|TRIM16|10626|tripartite motif containing 16##HQ257965|TRIM16|10626|tripartite motif containing 16##AK002035|TRIM16|10626|tripartite motif containing 16##AK314557|TRIM16|10626|tripartite motif containing 16##AK057407|CDRT1|374286|CMT1A duplicated region transcript 1##NM_006382|CDRT1|374286|CMT1A duplicated region transcript 1##BC011952|FAM18B2|201158|family with sequence similarity 18, member B2##AK303475|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 readthrough##AB074181|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 readthrough##AK310363|FAM18B2|201158|family with sequence similarity 18, member B2##NM_001135036|FAM18B2|201158|family with sequence similarity 18, member B2##NM_001204478|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 readthrough##NM_145301|FAM18B2|201158|family with sequence similarity 18, member B2##BC053514|TRIM16|10626|tripartite motif containing 16##BC067096|TRIM16|10626|tripartite motif containing 16##NM_006470|TRIM16|10626|tripartite motif containing 16##NM_001130842|ZNF286A|57335|zinc finger protein 286A##NM_020652|ZNF286A|57335|zinc finger protein 286A##AK315062|ZNF286A|57335|zinc finger protein 286A##BC015730|ZNF286A|57335|zinc finger protein 286A##BC025260|ZNF286A|57335|zinc finger protein 286A##AK092259|ZNF286A|57335|zinc finger protein 286A	0.793499	CTCF.p2:29:0.793
chr4	162873705	162873819	reg1014820.p2	7.741	+	AK294459 NM_014247	-2684765	+	AK058100 NM_152543	-2917430	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-3183477	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	211389	-	TSC_hg19_v1_chr4_-_164088002 AK097352	1214230	-	TSC_hg19_v1_chr4_-_164088043 AK308601	1214275	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.0	
chr1	183512868	183512984	reg1017475.p2	7.740	+	TSC_hg19_v1_chr1_+_183441650 D87437 AB085674	-71256	+	AK297207 TSC_hg19_v1_chr1_+_183441641 AK299178 AK056035 AK091477 AX747010 BC036381 AK307394 AK074297	-71296	+	TSC_hg19_v1_chr1_+_183441464 NM_001174061 NM_173156 NM_201568 NM_201569	-71436	+	BT007439 AB590135 DQ893650 DQ895812 CU674784 AF527950 TSC_hg19_v1_chr1_-_183559595 AK296672 AK312666 AK298713	46632	-	TSC_hg19_v1_chr1_-_183559669 BC001606 NM_000433 NM_001190789 NM_001190794	46787	-	M32011 TSC_hg19_v1_chr1_-_183560049 NM_001127651	47106	-	D87437|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AB085674|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK297207|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK299178|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK056035|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK091477|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC036381|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK307394|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK074297|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001174061|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_173156|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_201568|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_201569|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##BT007439|NCF2|4688|neutrophil cytosolic factor 2##DQ893650|NCF2|4688|neutrophil cytosolic factor 2##DQ895812|NCF2|4688|neutrophil cytosolic factor 2##AF527950|NCF2|4688|neutrophil cytosolic factor 2##AK296672|NCF2|4688|neutrophil cytosolic factor 2##AK312666|NCF2|4688|neutrophil cytosolic factor 2##AK298713|NCF2|4688|neutrophil cytosolic factor 2##BC001606|NCF2|4688|neutrophil cytosolic factor 2##NM_000433|NCF2|4688|neutrophil cytosolic factor 2##NM_001190789|NCF2|4688|neutrophil cytosolic factor 2##NM_001190794|NCF2|4688|neutrophil cytosolic factor 2##M32011|NCF2|4688|neutrophil cytosolic factor 2##NM_001127651|NCF2|4688|neutrophil cytosolic factor 2	0.015463	
chr2	196440908	196441089	reg1018099.p2	7.740	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-3381369	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	-3381684	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-3729027	-	BC029413 NM_001127257 CR749813	80577	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	80910	+	AB463018 AF327442 AK094515 NM_018897 AB023161	492497	-	BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7	0.798072	CTCF.p2:25:0.798
chr11	65356252	65356389	reg1016882.p2	7.739	+	TSC_hg19_v1_chr11_+_65343506 NM_001099409	-12817	+	BC032373 NM_001098784 NM_001098785 NM_152832 AF052151 TSC_hg19_v1_chr11_+_65340004	-16389	+	TSC_hg19_v1_chr11_+_65337947 AB001740 NM_006396 BC014791 DQ891782 DQ894966	-18378	+	AF110522 AF110523 AF110524 NM_005714 NM_033347 NM_033348 NM_033455	7146	-	TSC_hg19_v1_chr11_-_65381690 U07747 BC064543 AK315557 AB209655 BC011263 L32976 AK222781 NM_002419	25373	-	TSC_hg19_v1_chr11_-_65381782 AK310986	25488	-	NM_001099409|EHBP1L1|254102|EH domain binding protein 1-like 1##BC032373|FAM89B|23625|family with sequence similarity 89, member B##NM_001098784|FAM89B|23625|family with sequence similarity 89, member B##NM_001098785|FAM89B|23625|family with sequence similarity 89, member B##NM_152832|FAM89B|23625|family with sequence similarity 89, member B##AF052151|FAM89B|23625|family with sequence similarity 89, member B##AB001740|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##NM_006396|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##BC014791|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##DQ891782|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##DQ894966|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##AF110522|KCNK7|10089|potassium channel, subfamily K, member 7##AF110523|KCNK7|10089|potassium channel, subfamily K, member 7##AF110524|KCNK7|10089|potassium channel, subfamily K, member 7##NM_005714|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033347|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033348|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033455|KCNK7|10089|potassium channel, subfamily K, member 7##U07747|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##BC064543|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##AK315557|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##AB209655|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##BC011263|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##L32976|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##AK222781|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##NM_002419|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11	0.95446	CTCF.p2:44:0.862
chr1	27004194	27004283	reg1005274.p2	7.738	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	-131880	+	TSC_hg19_v1_chr1_+_26872335 AK092955	-131915	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-147903	+	NM_006015 NM_139135 AF231056	18284	+	AB210022 AF219114 AB051293 AF265208 TSC_hg19_v1_chr1_+_27024003	19731	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	97050	+	AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.11892	
chr5	98440381	98440529	reg1018278.p2	7.738	+	BC054860 BC117134 NM_001270 AF006513	-178227	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-335414	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-1921468	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	1430618	+	AF529367 TSC_hg19_v1_chr5_+_99871306	1430815	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	1798473	-	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.020829	
chrX	39011468	39011618	reg1018867.p1	7.738	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-348003	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-348083	+	BC008908 NM_021242	-348471	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	945149	-	BC114220 NM_001123383 NM_001123384	1025038	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	1428643	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.0	
chr2	200726009	200726135	reg1016477.p1	7.737	+	BC039445 TSC_hg19_v1_chr2_-_200715916	-10159	-	AB568489 TSC_hg19_v1_chr2_-_200715872	-10209	-	AK291463 NM_015265	-390084	-	TSC_hg19_v1_chr2_+_200775981 NM_153689	49905	+	TSC_hg19_v1_chr2_+_200776015 AK096292	49942	+	TSC_hg19_v1_chr2_+_200776033 BC036456 AK303210	49964	+	BC039445|FONG|348751|uncharacterized LOC348751##AB568489|FONG|348751|uncharacterized LOC348751##AK291463|SATB2|23314|SATB homeobox 2##NM_015265|SATB2|23314|SATB homeobox 2##NM_153689|C2orf69|205327|chromosome 2 open reading frame 69##AK096292|C2orf69|205327|chromosome 2 open reading frame 69##BC036456|C2orf69|205327|chromosome 2 open reading frame 69	0.890569	CTCF.p2:10:0.891
chr4	141445042	141445182	reg1019935.p1	7.737	+	TSC_hg19_v1_chr4_-_141348803 BC028357 D86322 AK299243 AK302149 AK290819 NM_001130675 NM_004362	-96319	-	TSC_hg19_v1_chr4_+_141294802 BC016511	-150297	+	TSC_hg19_v1_chr4_+_141294799 AF330205 AF448857 AB015335	-150344	+	NM_153702 TSC_hg19_v1_chr4_+_141445321 AK312800 BX648349	204	+	TSC_hg19_v1_chr4_+_141445351 BX648843 BC015168 AK093087	243	+	U28480 BC069556 BC096736 BC098168 BC098258 BC098352 NM_021833	44808	-	BC028357|CLGN|1047|calmegin##D86322|CLGN|1047|calmegin##AK299243|CLGN|1047|calmegin##AK302149|CLGN|1047|calmegin##AK290819|CLGN|1047|calmegin##NM_001130675|CLGN|1047|calmegin##NM_004362|CLGN|1047|calmegin##BC016511|SCOC|60592|short coiled-coil protein##AF330205|SCOC|60592|short coiled-coil protein##AF448857|SCOC|60592|short coiled-coil protein##AB015335|SCOC|60592|short coiled-coil protein##NM_153702|ELMOD2|255520|ELMO/CED-12 domain containing 2##AK312800|ELMOD2|255520|ELMO/CED-12 domain containing 2##BX648349|ELMOD2|255520|ELMO/CED-12 domain containing 2##BX648843|ELMOD2|255520|ELMO/CED-12 domain containing 2##BC015168|ELMOD2|255520|ELMO/CED-12 domain containing 2##AK093087|ELMOD2|255520|ELMO/CED-12 domain containing 2##U28480|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC069556|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC096736|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098168|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098258|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098352|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##NM_021833|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)	0.0	
chr5	73331438	73331568	reg1017712.p1	7.737	+	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	-222153	+	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	-409518	+	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	-469921	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	604960	-	AK096578 NM_003633	605745	-	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	649505	+	AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)	0.149048	
chr11	96198023	96198168	reg1019840.p1	7.735	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-74921	+	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	-75053	-	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	-121692	-	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	2693654	+	AB013802 AB013803 NM_175566	3228778	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	4360033	+	AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42	0.999638	CTCF.p2:-13:1.000
chr17	74582222	74582339	reg1018585.p2	7.735	+	NM_006456 TSC_hg19_v1_chr17_-_74582222	-93	-	TSC_hg19_v1_chr17_-_74581934 AK225943	-339	-	TSC_hg19_v1_chr17_-_74581928 BT019972 BC040455 AJ251053 U14550	-375	-	AY096001 CU692632 BC022462 TSC_hg19_v1_chr17_-_74639807 AK310906 AY358918 BC063830 NM_018414	57526	-	TSC_hg19_v1_chr17_-_74707048 AB590448 NM_001008528 NM_001008529 NM_198530 BC094776	124752	-	TSC_hg19_v1_chr17_-_74707067 BC053983	124820	-	NM_006456|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##AK225943|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##BT019972|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##BC040455|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##AJ251053|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##U14550|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##AY096001|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##BC022462|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##AK310906|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##AY358918|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##BC063830|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##NM_018414|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##NM_001008528|MXRA7|439921|matrix-remodelling associated 7##NM_001008529|MXRA7|439921|matrix-remodelling associated 7##NM_198530|MXRA7|439921|matrix-remodelling associated 7##BC094776|MXRA7|439921|matrix-remodelling associated 7##BC053983|MXRA7|439921|matrix-remodelling associated 7	0.943285	CTCF.p2:23:0.331	CTCF.p2:49:0.613
chr11	64510455	64510541	reg1018271.p1	7.734	+	TSC_hg19_v1_chr11_-_64510461 AK314637	-30	-	HQ258466 AB590919 TSC_hg19_v1_chr11_-_64510439	-102	-	TSC_hg19_v1_chr11_-_64490666 AB023138 BC150275 NM_015080 NM_138732	-19833	-	TSC_hg19_v1_chr11_-_64511625 AF081194 U78170 AK122694 NM_001098671	1095	-	TSC_hg19_v1_chr11_-_64512344 BC110306 NM_001098670	1812	-	BC117151 AF043722 AF043723 NM_153819 Y12336	2428	-	AK314637|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##HQ258466|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AB023138|NRXN2|9379|neurexin 2##BC150275|NRXN2|9379|neurexin 2##NM_015080|NRXN2|9379|neurexin 2##NM_138732|NRXN2|9379|neurexin 2##AF081194|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##U78170|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AK122694|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##NM_001098671|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##BC110306|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##NM_001098670|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##BC117151|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AF043722|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AF043723|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##NM_153819|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##Y12336|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)	0.940656	CTCF.p2:2:0.941
chr15	31391614	31391753	reg1016156.p1	7.734	+	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	-107916	-	CR936734 CR936727 TSC_hg19_v1_chr15_+_31196114 AB023235	-195566	+	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	-195609	+	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	2234	-	GQ502181 HM135791 NM_001252020	61745	-	NM_001243538	131366	-	AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10##CR936734|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936727|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AB023235|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001243538|LOC283710|283710|uncharacterized LOC283710	0.060443	
chr4	48548460	48548597	reg1019288.p1	7.734	+	TSC_hg19_v1_chr4_+_48492278 BC136265 AY191416 NM_175619	-56247	+	TSC_hg19_v1_chr4_+_48485353 AK126542 NM_152679 BC019066 BC012048 DQ892628 EU176704 AY704414	-63101	+	TSC_hg19_v1_chr4_+_48343571 BC006139 BC007701 BC012067 NM_020846 AB040891	-204915	+	TSC_hg19_v1_chr4_-_48782266 AL833444	233741	-	TSC_hg19_v1_chr4_-_48782286 BC040987 BC050336 NM_015030	233770	-	TSC_hg19_v1_chr4_+_48833104 NM_001079840 NM_001079841 NM_017830 AK297864 AF323665 AF324350 AK000462 BC003409 NM_001079839 NM_001079842 NM_001168254 BC088361	284723	+	BC136265|ZAR1|326340|zygote arrest 1##AY191416|ZAR1|326340|zygote arrest 1##NM_175619|ZAR1|326340|zygote arrest 1##AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC006139|SLAIN2|57606|SLAIN motif family, member 2##BC007701|SLAIN2|57606|SLAIN motif family, member 2##BC012067|SLAIN2|57606|SLAIN motif family, member 2##NM_020846|SLAIN2|57606|SLAIN motif family, member 2##AB040891|SLAIN2|57606|SLAIN motif family, member 2##AL833444|FRYL|285527|FRY-like##BC040987|FRYL|285527|FRY-like##BC050336|FRYL|285527|FRY-like##NM_015030|FRYL|285527|FRY-like##NM_001079840|OCIAD1|54940|OCIA domain containing 1##NM_001079841|OCIAD1|54940|OCIA domain containing 1##NM_017830|OCIAD1|54940|OCIA domain containing 1##AK297864|OCIAD1|54940|OCIA domain containing 1##AF323665|OCIAD1|54940|OCIA domain containing 1##AF324350|OCIAD1|54940|OCIA domain containing 1##AK000462|OCIAD1|54940|OCIA domain containing 1##BC003409|OCIAD1|54940|OCIA domain containing 1##NM_001079839|OCIAD1|54940|OCIA domain containing 1##NM_001079842|OCIAD1|54940|OCIA domain containing 1##NM_001168254|OCIAD1|54940|OCIA domain containing 1##BC088361|OCIAD1|54940|OCIA domain containing 1	0.982262	CTCF.p2:11:0.982
chr5	36696288	36696401	reg1017736.p1	7.734	+	NM_001166695 U03504 AB529121 AY954110 TSC_hg19_v1_chr5_+_36608562	-87848	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	-89616	+	NM_001166696 NM_004172	-89888	+	TSC_hg19_v1_chr5_-_36876762 AK000901	180419	-	TSC_hg19_v1_chr5_+_36876875 NM_015384 NM_133433 AJ627032 AJ640137	180520	+	TSC_hg19_v1_chr5_+_36876945 BC146821 BX640644 BC131490 AK290347 BX538178 BX538177	180726	+	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK000901|LOC646719|646719|uncharacterized LOC646719##NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)##NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)##BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)##BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)##BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)##AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)	0.993417	CTCF.p2:20:0.993
chr5	58182590	58182721	reg1019979.p1	7.734	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	-303736	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	-395361	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	-426719	-	BC036319 NM_001197223	113103	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	152723	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	389275	-	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.986609	CTCF.p2:-9:0.987
chr12	110990228	110990333	reg1013741.p2	7.733	+	AK124109 NM_152442 AK301826 BC037353 AK302512 AY297459 BC068031 BC047645 AK097665	-50205	+	TSC_hg19_v1_chr12_-_110939917 BC015095 AF201946 AF175264 BC000880 AF168716 AF193795 AK129767 BC017964 AB578891 AB618733 AL136614 BC095446 NM_016226 NM_057180 BC032462 AB578892	-50370	-	TSC_hg19_v1_chr12_+_110906672 CR457001 CU676792 DQ891800 DQ894984	-83611	+	TSC_hg19_v1_chr12_-_111020755 AY357944	30513	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	30790	-	AK124744 TSC_hg19_v1_chr12_-_111021124	30846	-	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)##NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)##AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)##BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)##AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)##AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)##BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)##BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)##AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)##BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578891|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB618733|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578892|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##CR457001|C12orf24|29902|chromosome 12 open reading frame 24##DQ891800|C12orf24|29902|chromosome 12 open reading frame 24##DQ894984|C12orf24|29902|chromosome 12 open reading frame 24##AY357944|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)	0.966367	CTCF.p2:1:0.966
chr5	100110611	100110726	reg1016511.p1	7.733	+	AF529367 TSC_hg19_v1_chr5_+_99871306	-239398	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-239595	+	BC054860 BC117134 NM_001270 AF006513	-1848440	-	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	128260	-	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	1521440	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	1723965	-	AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1	0.830068	CTCF.p2:-16:0.830
chr5	99814926	99815054	reg1018043.p1	7.733	+	BC054860 BC117134 NM_001270 AF006513	-1552762	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-1709949	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-3296003	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	56083	+	AF529367 TSC_hg19_v1_chr5_+_99871306	56280	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	423938	-	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.933858	CTCF.p2:-9:0.934
chrX	46662753	46662894	reg1020169.p1	7.733	+	TSC_hg19_v1_chrX_-_46618608 BC094742	-44193	-	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	-44294	-	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	-229545	+	NM_006915 AJ007590 TSC_hg19_v1_chrX_+_46696391 BC027851	33554	+	BC043348 BC053530 TSC_hg19_v1_chrX_+_46696426	33603	+	TSC_hg19_v1_chrX_+_46696479 AK312555 CU692158	33681	+	BC094742|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC043348|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC053530|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AK312555|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	0.0	
chr10	79011167	79011300	reg1017686.p2	7.732	+	AF267860 NM_032024	-1468715	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1849668	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1849752	-	AF118141 TSC_hg19_v1_chr10_-_79397246	385992	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	386103	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	386173	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.138287	
chr12	42963194	42963315	reg1017861.p1	7.732	+	TSC_hg19_v1_chr12_-_42877811 NM_001144882 NM_001144883	-85455	-	AK122881 TSC_hg19_v1_chr12_-_42877772	-85496	-	TSC_hg19_v1_chr12_-_42877418 AK122877 NM_001144881	-85838	-	BC114939 BC114940 AF399844 AF543759 AF543760 AK056499 TSC_hg19_v1_chr12_-_42983549 NM_153026	20238	-	AF488804 AJ515153 AJ515154 NM_025003	982469	-	AL136759 TSC_hg19_v1_chr12_-_44152566 BX647494 NM_001098615 AK097331 AK225903 NM_001098614 BC020781 CR627435 BC068502 AK092030 AX747323 NM_031292	1189321	-	NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK122877|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##BC114939|PRICKLE1|144165|prickle homolog 1 (Drosophila)##BC114940|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF399844|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543759|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543760|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK056499|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_153026|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF488804|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AJ515153|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AJ515154|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##NM_025003|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AL136759|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BX647494|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098615|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK097331|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK225903|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098614|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC020781|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##CR627435|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC068502|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK092030|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_031292|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like	0.61124	CTCF.p2:-3:0.611
chr1	74305770	74305863	reg1015093.p1	7.732	+	TSC_hg19_v1_chr1_-_72748491 AY358132	-1557311	-	TSC_hg19_v1_chr1_-_72748182 AK295481 BX538014 AK092307 AX747470 NM_173808	-1557605	-	NM_005455 NM_203350	-2758845	-	AK131476 BC020778 BX647210 TSC_hg19_v1_chr1_-_74663861 NM_001105659	358032	-	NM_001112808 NM_001199327 NM_001199328 NM_001199329 NM_003838 TSC_hg19_v1_chr1_+_74663927 BC020720 AK294948 AF017445 AK304490 BC032865 AK223254 BC032308 AK299468	358120	+	NM_015978 AF116826 AK307984 BC113539 BC117262 AY303691 HQ258528	395286	+	AK295481|NEGR1|257194|neuronal growth regulator 1##BX538014|NEGR1|257194|neuronal growth regulator 1##AK092307|NEGR1|257194|neuronal growth regulator 1##NM_173808|NEGR1|257194|neuronal growth regulator 1##NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK131476|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BC020778|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BX647210|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001105659|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001112808|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199327|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199328|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_001199329|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_003838|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC020720|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK294948|FPGT|8790|fucose-1-phosphate guanylyltransferase##AF017445|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK304490|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032865|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##AK223254|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032308|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK299468|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_015978|TNNI3K|51086|TNNI3 interacting kinase##AF116826|TNNI3K|51086|TNNI3 interacting kinase##AK307984|TNNI3K|51086|TNNI3 interacting kinase##BC113539|TNNI3K|51086|TNNI3 interacting kinase##BC117262|TNNI3K|51086|TNNI3 interacting kinase##AY303691|TNNI3K|51086|TNNI3 interacting kinase##HQ258528|TNNI3K|51086|TNNI3 interacting kinase	0.998871	CTCF.p2:-8:0.999
chr1	21817430	21817558	reg1021157.p1	7.731	+	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	-50812	+	X98272 TSC_hg19_v1_chr1_-_21671998 NM_001113348	-145514	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	-200560	-	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	18365	+	TSC_hg19_v1_chr1_+_21835918 AK295608 AK312667 AK298085 BC021289 BC066116 BC090861 AB011406 AH007388 X95994 AK293184 BC110909	18438	+	AB003930 TSC_hg19_v1_chr1_-_21949064	131543	-	AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##X98272|ECE1|1889|endothelin converting enzyme 1##NM_001113348|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK295608|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK312667|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK298085|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC021289|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC066116|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC090861|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB011406|ALPL|249|alkaline phosphatase, liver/bone/kidney##X95994|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK293184|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC110909|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein	0.997415	CTCF.p2:1:0.997
chr16	80886281	80886377	reg1013133.p1	7.731	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	-48282	-	AF125108 NM_130897 BC054892 BC035232	-311441	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-1251714	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	153755	+	TSC_hg19_v1_chr16_+_81040132 BC007334	153814	+	TSC_hg19_v1_chr16_-_81040491 AF201935 BC032631 NM_020188	154141	-	AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N##BC007334|CENPN|55839|centromere protein N##AF201935|C16orf61|56942|chromosome 16 open reading frame 61##BC032631|C16orf61|56942|chromosome 16 open reading frame 61##NM_020188|C16orf61|56942|chromosome 16 open reading frame 61	0.989197	CTCF.p2:10:0.989
chr19	51524396	51524549	reg1020219.p1	7.731	+	AK292365 BC002710 NM_002776 NM_001077500	-1121	-	AF024605 NM_145888 TSC_hg19_v1_chr19_-_51522966 AY561635	-1486	-	AB463811 DQ267419 AY551001 NM_012315	-11626	-	AB259014 AK308207 NM_001136032	5398	-	AY359014 AB012917 BC015551 AB041036 NM_144947	6360	-	AB013730 BC022068 NM_001167605 NM_006853	6814	-	AK292365|KLK10|5655|kallikrein-related peptidase 10##BC002710|KLK10|5655|kallikrein-related peptidase 10##NM_002776|KLK10|5655|kallikrein-related peptidase 10##NM_001077500|KLK10|5655|kallikrein-related peptidase 10##AF024605|KLK10|5655|kallikrein-related peptidase 10##NM_145888|KLK10|5655|kallikrein-related peptidase 10##AY561635|KLK10|5655|kallikrein-related peptidase 10##AY551001|KLK9|284366|kallikrein-related peptidase 9##NM_012315|KLK9|284366|kallikrein-related peptidase 9##AB259014|KLK11|11012|kallikrein-related peptidase 11##AK308207|KLK11|11012|kallikrein-related peptidase 11##NM_001136032|KLK11|11012|kallikrein-related peptidase 11##AY359014|KLK11|11012|kallikrein-related peptidase 11##AB012917|KLK11|11012|kallikrein-related peptidase 11##BC015551|KLK11|11012|kallikrein-related peptidase 11##AB041036|KLK11|11012|kallikrein-related peptidase 11##NM_144947|KLK11|11012|kallikrein-related peptidase 11##AB013730|KLK11|11012|kallikrein-related peptidase 11##BC022068|KLK11|11012|kallikrein-related peptidase 11##NM_001167605|KLK11|11012|kallikrein-related peptidase 11##NM_006853|KLK11|11012|kallikrein-related peptidase 11	0.875895	CTCF.p2:-3:0.876
chr22	41156399	41156537	reg1017837.p2	7.731	+	AK314857 AF490537 NM_005297 BC001736 BC021146 AY745811 AY747629 CR456497 AB063174 CU013094 CU013382 AB463112 AY562945 BT006725 DQ893603 DQ895065	-81247	+	TSC_hg19_v1_chr22_-_41032716 BC115039 NM_020831 AF448806 AB037859 BC064620 AJ297258	-123764	-	TSC_hg19_v1_chr22_-_41032681 AF368061	-123815	-	AB528234 CU013178 CU013466 CU675207 DQ893138 DQ896422 AK298215 AK300553 CR456577 BC012998 BX647991 AK292924 BC005957 BC024741 TSC_hg19_v1_chr22_-_41215380 BC039064 Y12860 NM_006358	58859	-	CU013186 CU013474 BC107120 BC101206 BC101207 BC101208 BC107148 BC139724 AK316155 AY513286 BC071629 BC121107 BC121108 U17714 U28918 AY826824 AY826825 TSC_hg19_v1_chr22_-_41252629 AK312399 BC052982	96121	-	TSC_hg19_v1_chr22_-_41252644 AK303530 AK130770	96172	-	AK314857|MCHR1|2847|melanin-concentrating hormone receptor 1##AF490537|MCHR1|2847|melanin-concentrating hormone receptor 1##NM_005297|MCHR1|2847|melanin-concentrating hormone receptor 1##BC001736|MCHR1|2847|melanin-concentrating hormone receptor 1##BC021146|MCHR1|2847|melanin-concentrating hormone receptor 1##AY745811|MCHR1|2847|melanin-concentrating hormone receptor 1##AY747629|MCHR1|2847|melanin-concentrating hormone receptor 1##CR456497|MCHR1|2847|melanin-concentrating hormone receptor 1##AB063174|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013094|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013382|MCHR1|2847|melanin-concentrating hormone receptor 1##AY562945|MCHR1|2847|melanin-concentrating hormone receptor 1##BT006725|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ893603|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ895065|MCHR1|2847|melanin-concentrating hormone receptor 1##BC115039|MKL1|57591|megakaryoblastic leukemia (translocation) 1##NM_020831|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF448806|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AB037859|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC064620|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AJ297258|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF368061|MKL1|57591|megakaryoblastic leukemia (translocation) 1##CU013178|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##CU013466|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##DQ893138|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##DQ896422|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##AK298215|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##AK300553|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##CR456577|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BC012998|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BX647991|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##AK292924|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BC005957|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BC024741|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##BC039064|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##Y12860|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##NM_006358|SLC25A17|10478|solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17##CU013186|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##CU013474|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC101206|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC101207|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC101208|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC107148|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC139724|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AK316155|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AY513286|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC071629|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC121107|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC121108|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##U17714|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##U28918|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AY826824|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AY826825|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AK312399|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##BC052982|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AK303530|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##AK130770|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)	0.974967	CTCF.p2:-8:0.975
chr15	27262475	27262607	reg1019459.p1	7.730	+	NM_033223 BC029850 BC045709 S82769	-45994	+	L08485 AK290453 TSC_hg19_v1_chr15_+_27112237 NM_001165037	-150305	+	NM_000810	-150676	+	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	1081892	-	AF071172 BC015486 BC142951 BC045544 NM_004667	1304730	-	TSC_hg19_v1_chr15_+_29033278 AK302529	1770782	+	NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##L08485|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AK290453|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_001165037|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_000810|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene	0.0	
chr20	23704440	23704581	reg1021527.p1	7.730	+	CU688086 BC074952 BC074953 NM_001899 X54667 BC065714	-34869	-	BX647523 BT006839 CR541988 CR542018 AB590227 DQ891439 EU176584 AB587083 TSC_hg19_v1_chr20_-_23618593 BC013083 NM_000099 X05607 BC110305 AK312213	-86011	-	AF494536 BC137302 BC137303 NM_001008693	-117950	-	J03870 BC021225 NM_001898	27055	-	CU687582 NM_001322 BC062679	102822	-	AB590893 CU686872 HQ447459 BC069514 X70377 BC062678 NM_001900	155836	-	BC074952|CST4|1472|cystatin S##BC074953|CST4|1472|cystatin S##NM_001899|CST4|1472|cystatin S##X54667|CST4|1472|cystatin S##BC065714|CST4|1472|cystatin S##BX647523|CST3|1471|cystatin C##BT006839|CST3|1471|cystatin C##CR541988|CST3|1471|cystatin C##CR542018|CST3|1471|cystatin C##DQ891439|CST3|1471|cystatin C##EU176584|CST3|1471|cystatin C##AB587083|CST3|1471|cystatin C##BC013083|CST3|1471|cystatin C##NM_000099|CST3|1471|cystatin C##X05607|CST3|1471|cystatin C##BC110305|CST3|1471|cystatin C##AK312213|CST3|1471|cystatin C##AF494536|CST9|128822|cystatin 9 (testatin)##BC137302|CST9|128822|cystatin 9 (testatin)##BC137303|CST9|128822|cystatin 9 (testatin)##NM_001008693|CST9|128822|cystatin 9 (testatin)##J03870|CST1|1469|cystatin SN##BC021225|CST1|1469|cystatin SN##NM_001898|CST1|1469|cystatin SN##NM_001322|CST2|1470|cystatin SA##BC062679|CST2|1470|cystatin SA##HQ447459|CST5|1473|cystatin D##BC069514|CST5|1473|cystatin D##X70377|CST5|1473|cystatin D##BC062678|CST5|1473|cystatin D##NM_001900|CST5|1473|cystatin D	0.998771	CTCF.p2:-8:0.999
chr2	171785377	171785497	reg1013148.p1	7.730	+	NM_001201428 AL117430 AK125761 NM_015530	-446	+	TSC_hg19_v1_chr2_+_171673396 AK292582 BC026349 BC002815 S61898 L16888 Z22750	-112025	+	M81883 NM_000817 NM_013445 BC037780 TSC_hg19_v1_chr2_+_171673241	-112278	+	TSC_hg19_v1_chr2_+_171785776 AK315508 AK023201 AK225810 AK293640 AK023082	264	+	TSC_hg19_v1_chr2_+_171785781 AK298020 BC007770 BC001408 AK296698 AK027349 AB528359 DQ892715 DQ895965 CU675801	377	+	AK301857 NM_001136555	138045	-	NM_001201428|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AL117430|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK125761|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##NM_015530|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK292582|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC026349|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC002815|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##S61898|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##L16888|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##Z22750|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##M81883|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_000817|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_013445|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC037780|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##AK315508|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023201|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK225810|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK293640|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023082|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK298020|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC007770|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC001408|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK296698|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK027349|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ892715|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ895965|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK301857|TLK1|9874|tousled-like kinase 1##NM_001136555|TLK1|9874|tousled-like kinase 1	0.833078	CTCF.p2:4:0.833
chr8	32785478	32785599	reg1017308.p2	7.730	+	TSC_hg19_v1_chr8_+_32785485 BC034319	-49	+	NM_001159996 AK293270 AK293240	-206146	+	AK289927 NM_013959	-281288	+	TSC_hg19_v1_chr8_-_33330616 BC004884	545075	-	AK098505 AK297132 TSC_hg19_v1_chr8_-_33330636 AK303231 AJ512465 AJ535838 AJ535839 AK292993 AJ582015 NM_032664	545108	-	NM_032509 TSC_hg19_v1_chr8_+_33342703 AK314491 AK225476 AK027469 BC015965 AF251062 BC039740 BC028230 BC050528 CU690708	557166	+	NM_001159996|NRG1|3084|neuregulin 1##AK293270|NRG1|3084|neuregulin 1##AK293240|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1##BC004884|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK098505|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK297132|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK303231|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ512465|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535838|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535839|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK292993|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ582015|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032664|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032509|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK314491|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK225476|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK027469|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC015965|MAK16|84549|MAK16 homolog (S. cerevisiae)##AF251062|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC039740|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC028230|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC050528|MAK16|84549|MAK16 homolog (S. cerevisiae)	0.075381	
chr20	35492204	35492311	reg1016947.p1	7.729	+	TSC_hg19_v1_chr20_-_35492072 NM_080627	-123	-	AK126630 NM_199181	-3982	-	TSC_hg19_v1_chr20_-_35444558 AK131491	-47637	-	TSC_hg19_v1_chr20_+_35504544 BC127688 BC130646 BC130648 AK123544 NM_080628 HQ258755	12292	+	AB013847 CU690348 TSC_hg19_v1_chr20_-_35580085 BC036450 AK304187 AB208944	87815	-	TSC_hg19_v1_chr20_-_35580112 AK304795 AL050267	87856	-	NM_080627|KIAA0889|140710|KIAA0889##AK126630|KIAA0889|140710|KIAA0889##NM_199181|KIAA0889|140710|KIAA0889##AK131491|KIAA0889|140710|KIAA0889##BC127688|C20orf118|140711|chromosome 20 open reading frame 118##BC130646|C20orf118|140711|chromosome 20 open reading frame 118##BC130648|C20orf118|140711|chromosome 20 open reading frame 118##AK123544|C20orf118|140711|chromosome 20 open reading frame 118##NM_080628|C20orf118|140711|chromosome 20 open reading frame 118##HQ258755|C20orf118|140711|chromosome 20 open reading frame 118##AB013847|SAMHD1|25939|SAM domain and HD domain 1##BC036450|SAMHD1|25939|SAM domain and HD domain 1##AK304187|SAMHD1|25939|SAM domain and HD domain 1##AB208944|SAMHD1|25939|SAM domain and HD domain 1##AK304795|SAMHD1|25939|SAM domain and HD domain 1##AL050267|SAMHD1|25939|SAM domain and HD domain 1	0.0	
chr22	31741899	31741988	reg1014961.p2	7.729	+	AK291803 TSC_hg19_v1_chr22_-_31741928 BC021091	-78	-	TSC_hg19_v1_chr22_-_31741603 AL096880 CU013210 CU013498 AB384725 AF242522 CR456613	-318	-	AB489144 CU013051 CU013339 CR456340 GU135609 AK226089 TSC_hg19_v1_chr22_-_31688475 AK300990 AF528079 AF528080 BC011049 AK074688 AK299397 NM_001135911 NM_052880	-53519	-	AF254082 AF254083 AF254084 AF254085 AF119256 NM_014323 NM_032050 NM_032051 NM_032052 TSC_hg19_v1_chr22_-_31742310 AB208787	322	-	TSC_hg19_v1_chr22_-_31742333 BC051357	391	-	TSC_hg19_v1_chr22_+_31742744 BC004550 CR456348 AK000471 CU013058 CU013346	887	+	AK291803|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##BC021091|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AL096880|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF242522|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##CR456613|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##CR456340|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##GU135609|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK226089|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK300990|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AF528079|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AF528080|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##BC011049|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK074688|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK299397|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##NM_001135911|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##NM_052880|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AF254082|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF254083|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF254084|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF254085|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF119256|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##NM_014323|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##NM_032050|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##NM_032051|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##NM_032052|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AB208787|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##BC051357|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##BC004550|FLJ20464|54944|uncharacterized protein FLJ20464##CR456348|FLJ20464|54944|uncharacterized protein FLJ20464##AK000471|FLJ20464|54944|uncharacterized protein FLJ20464	0.237384	CTCF.p2:0:0.225
chr4	37391726	37391854	reg1017576.p1	7.729	+	NM_001144990	-145101	+	BC157885 NM_001170700	-1106147	+	AK131492 NM_001136536 AK304357 AK316523	-1108544	+	NM_001104629 BC037906	63785	+	AK001879 NM_018302 AK225192	194079	+	TSC_hg19_v1_chr4_-_37687999 BC039540 AK075468 NM_001085399 NM_001085400	296183	-	NM_001144990|KIAA1239|57495|KIAA1239##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19##BC039540|RELL1|768211|RELT-like 1##AK075468|RELL1|768211|RELT-like 1##NM_001085399|RELL1|768211|RELT-like 1##NM_001085400|RELL1|768211|RELT-like 1	0.997932	CTCF.p2:7:0.998
chr12	100548634	100548801	reg1017099.p1	7.728	+	TSC_hg19_v1_chr12_-_100536644 NM_001006947 NM_015054	-12069	-	BC127017 AK125813 TSC_hg19_v1_chr12_-_100536637 BC014891	-12168	-	NM_152788	-170286	-	TSC_hg19_v1_chr12_+_100594593 BC015107 NM_022496 AF161399 AK222959 AB038229 AF212251 BC050679 AK023495 AK023684 AK296991 AF175226 CU677213	45878	+	BC015117 TSC_hg19_v1_chr12_-_100660855 BC039480 AK090824 AX746635 BC100927 BC100928 BC100929 BC100930 NM_152317	112095	-	TSC_hg19_v1_chr12_+_100661023 AK000936 BC011525	112283	+	NM_001006947|UHRF1BP1L|23074|UHRF1 binding protein 1-like##NM_015054|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC127017|UHRF1BP1L|23074|UHRF1 binding protein 1-like##AK125813|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC014891|UHRF1BP1L|23074|UHRF1 binding protein 1-like##NM_152788|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC015107|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##NM_022496|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AF161399|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK222959|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AB038229|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AF212251|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##BC050679|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK023495|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK023684|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK296991|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AF175226|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##BC015117|DEPDC4|120863|DEP domain containing 4##BC039480|DEPDC4|120863|DEP domain containing 4##AK090824|DEPDC4|120863|DEP domain containing 4##BC100927|DEPDC4|120863|DEP domain containing 4##BC100928|DEPDC4|120863|DEP domain containing 4##BC100929|DEPDC4|120863|DEP domain containing 4##BC100930|DEPDC4|120863|DEP domain containing 4##NM_152317|DEPDC4|120863|DEP domain containing 4##AK000936|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##BC011525|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	1.122892	CTCF.p2:2:0.999
chr21	19872233	19872362	reg1019813.p1	7.728	+	BC111749 NM_002772 U09860	-96332	-	AK296009 NM_001204174	-254106	+	TSC_hg19_v1_chr21_+_19617149 AF257472 NM_024944 AY358608 BC009418	-255135	+	TSC_hg19_v1_chr21_+_22370656 BC052946 NM_004540	2498345	+	TSC_hg19_v1_chr21_+_22370694 AK299054	2498393	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	2498476	+	BC111749|TMPRSS15|5651|transmembrane protease, serine 15##NM_002772|TMPRSS15|5651|transmembrane protease, serine 15##U09860|TMPRSS15|5651|transmembrane protease, serine 15##AK296009|CHODL|140578|chondrolectin##NM_001204174|CHODL|140578|chondrolectin##AF257472|CHODL|140578|chondrolectin##NM_024944|CHODL|140578|chondrolectin##AY358608|CHODL|140578|chondrolectin##BC009418|CHODL|140578|chondrolectin##BC052946|NCAM2|4685|neural cell adhesion molecule 2##NM_004540|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2	0.999955	CTCF.p2:-2:1.000
chr4	174240082	174240216	reg1018039.p2	7.728	+	BC040577 TSC_hg19_v1_chr4_-_174090813	-149342	-	BC043556 TSC_hg19_v1_chr4_-_174090314	-149839	-	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	-150197	+	Z17240 BT019782 BT019783 AB463732 DQ892288 DQ895487 NM_001130689 TSC_hg19_v1_chr4_-_174255014	14726	-	BC001063 BC100019 BC021054 TSC_hg19_v1_chr4_-_174255505 BC000903 AK311864 NM_001130688 NM_002129	15380	-	TSC_hg19_v1_chr4_+_174292088 NM_003864 AF055993	51914	+	NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##Z17240|HMGB2|3148|high mobility group box 2##BT019782|HMGB2|3148|high mobility group box 2##BT019783|HMGB2|3148|high mobility group box 2##DQ892288|HMGB2|3148|high mobility group box 2##DQ895487|HMGB2|3148|high mobility group box 2##NM_001130689|HMGB2|3148|high mobility group box 2##BC001063|HMGB2|3148|high mobility group box 2##BC100019|HMGB2|3148|high mobility group box 2##BC000903|HMGB2|3148|high mobility group box 2##AK311864|HMGB2|3148|high mobility group box 2##NM_001130688|HMGB2|3148|high mobility group box 2##NM_002129|HMGB2|3148|high mobility group box 2##NM_003864|SAP30|8819|Sin3A-associated protein, 30kDa##AF055993|SAP30|8819|Sin3A-associated protein, 30kDa	0.978091	CTCF.p2:-23:0.978
chr6	8006581	8006700	reg1016099.p1	7.728	+	TSC_hg19_v1_chr6_-_7911022 BC001199 AJ440721 AL833008 AY326464 AK075291 AK098089 AY358646 NM_030810	-95598	-	TSC_hg19_v1_chr6_-_7910300 AK315598 NM_001145549	-96311	-	NM_001718 M60315 BC096084 BC096085 BC099624 BC099625 BC111763 BC112352 BC113018 BC113019 BC128031	-279590	+	TSC_hg19_v1_chr6_-_8064623 BC052310 AK025442 BC032438 CR749569 BX647336 BC119645 BC119644	57961	-	TSC_hg19_v1_chr6_-_8064644 AK301142 AF426434 NM_001199322 NM_001199323 NM_201280	58020	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	96150	-	BC001199|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AJ440721|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AL833008|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AY326464|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AK075291|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AK098089|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AY358646|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##NM_030810|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AK315598|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##NM_001145549|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##NM_001718|BMP6|654|bone morphogenetic protein 6##M60315|BMP6|654|bone morphogenetic protein 6##BC096084|BMP6|654|bone morphogenetic protein 6##BC096085|BMP6|654|bone morphogenetic protein 6##BC099624|BMP6|654|bone morphogenetic protein 6##BC099625|BMP6|654|bone morphogenetic protein 6##BC111763|BMP6|654|bone morphogenetic protein 6##BC112352|BMP6|654|bone morphogenetic protein 6##BC113018|BMP6|654|bone morphogenetic protein 6##BC113019|BMP6|654|bone morphogenetic protein 6##BC128031|BMP6|654|bone morphogenetic protein 6##BC052310|MUTED-TXNDC5|100526836|MUTED-TXNDC5 readthrough (non-protein coding)##AK025442|MUTED|63915|muted homolog (mouse)##BC032438|MUTED|63915|muted homolog (mouse)##CR749569|MUTED|63915|muted homolog (mouse)##BX647336|MUTED|63915|muted homolog (mouse)##BC119645|MUTED|63915|muted homolog (mouse)##BC119644|MUTED|63915|muted homolog (mouse)##AK301142|MUTED|63915|muted homolog (mouse)##AF426434|MUTED|63915|muted homolog (mouse)##NM_001199322|MUTED|63915|muted homolog (mouse)##NM_001199323|MUTED|63915|muted homolog (mouse)##NM_201280|MUTED|63915|muted homolog (mouse)##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1	0.888565	CTCF.p2:29:0.889
chrX	19562947	19563094	reg1017998.p1	7.728	+	NM_001001671	-29642	-	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	-200938	+	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	-422353	-	TSC_hg19_v1_chrX_-_19689029 AK293237 NM_001184960	126036	-	AK293234 AF542051 TSC_hg19_v1_chrX_-_19817892	254855	-	TSC_hg19_v1_chrX_-_19817907 NM_001024666	254892	-	NM_001001671|MAP3K15|389840|mitogen-activated protein kinase kinase kinase 15##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001024666|SH3KBP1|30011|SH3-domain kinase binding protein 1	0.923484	CTCF.p2:-10:0.923
chr10	10719575	10719675	reg1016326.p1	7.727	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-2622142	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-2622850	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-2622976	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	327632	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	327660	+	AK299548 TSC_hg19_v1_chr10_+_11047339	327715	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.887536	CTCF.p2:8:0.888
chr15	29039540	29039662	reg1016605.p1	7.727	+	TSC_hg19_v1_chr15_+_29033278 AK302529	-6278	+	AF071172 BC015486 BC142951 BC045544 NM_004667	-472330	-	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	-695168	-	TSC_hg19_v1_chr15_+_29077475 BC018626	37881	+	NM_001130414 NM_005503 AF047348 BC082986	174248	+	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	522369	-	AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2##M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2	0.825676	CTCF.p2:6:0.826
chr20	16260128	16260259	reg1017891.p1	7.727	+	BC018687 NM_001033087	-1082690	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-1941937	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-2283857	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	293820	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	450470	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	468828	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	0.039677	
chr4	40919064	40919158	reg1015012.p2	7.727	+	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-59936	-	BC042401 NM_024677 BC036568 AK024063	-167165	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-286404	-	BC088372 TSC_hg19_v1_chr4_-_40936716	17567	-	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	297458	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	339785	+	AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK304206|RBM47|54502|RNA binding motif protein 47##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.351205	CTCF.p2:2:0.319
chrX	57945655	57945754	reg1018153.p2	7.727	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-8745	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-327244	+	NM_007157	-327436	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	4625495	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	4702563	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	4835163	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.998425	CTCF.p2:0:0.998
chr12	49208492	49208634	reg1016053.p1	7.726	+	NM_001206917 AK304537 AK300901	-325	+	TSC_hg19_v1_chr12_-_49182812 AB007882 NM_020983 BC064923	-25755	-	AK225224 NM_015270 AF250226	-30670	-	TSC_hg19_v1_chr12_+_49208615 AK122911	82	+	TSC_hg19_v1_chr12_+_49209373 NM_001206916 AK297639 AK316323	773	+	NM_000725 NM_001206915 TSC_hg19_v1_chr12_+_49212307	3720	+	NM_001206917|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK304537|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK300901|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AB007882|ADCY6|112|adenylate cyclase 6##NM_020983|ADCY6|112|adenylate cyclase 6##BC064923|ADCY6|112|adenylate cyclase 6##AK225224|ADCY6|112|adenylate cyclase 6##NM_015270|ADCY6|112|adenylate cyclase 6##AF250226|ADCY6|112|adenylate cyclase 6##AK122911|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_001206916|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK297639|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK316323|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_001206915|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit	1.907138	CTCF.p2:-12:0.914	CTCF.p2:44:0.993
chr17	1572756	1572854	reg1015711.p1	7.726	+	DQ892467 DQ895680 TSC_hg19_v1_chr17_-_1553162 BC031621 AF370391 AJ404317 AK055755 AK314767 AJ278711 NM_031430	-19560	-	D63483 AK310174 AB052950 AB052949 AB052947 D86864 TSC_hg19_v1_chr17_-_1549050 AK291810 AB052948 BC039735 NM_003693 NM_145350 NM_145352 AK298737	-23768	-	TSC_hg19_v1_chr17_-_1532115 BC027923 NM_152346 BC071859	-40661	-	TSC_hg19_v1_chr17_-_1588115 AB007510 AF092565	15303	-	TSC_hg19_v1_chr17_-_1588132 BC000579 BC064370 NM_006445	15349	-	NM_001164407	40856	-	DQ892467|RILP|83547|Rab interacting lysosomal protein##DQ895680|RILP|83547|Rab interacting lysosomal protein##BC031621|RILP|83547|Rab interacting lysosomal protein##AF370391|RILP|83547|Rab interacting lysosomal protein##AJ404317|RILP|83547|Rab interacting lysosomal protein##AK055755|RILP|83547|Rab interacting lysosomal protein##AK314767|RILP|83547|Rab interacting lysosomal protein##AJ278711|RILP|83547|Rab interacting lysosomal protein##NM_031430|RILP|83547|Rab interacting lysosomal protein##D63483|SCARF1|8578|scavenger receptor class F, member 1##AK310174|SCARF1|8578|scavenger receptor class F, member 1##AB052950|SCARF1|8578|scavenger receptor class F, member 1##AB052949|SCARF1|8578|scavenger receptor class F, member 1##AB052947|SCARF1|8578|scavenger receptor class F, member 1##D86864|SCARF1|8578|scavenger receptor class F, member 1##AK291810|SCARF1|8578|scavenger receptor class F, member 1##AB052948|SCARF1|8578|scavenger receptor class F, member 1##BC039735|SCARF1|8578|scavenger receptor class F, member 1##NM_003693|SCARF1|8578|scavenger receptor class F, member 1##NM_145350|SCARF1|8578|scavenger receptor class F, member 1##NM_145352|SCARF1|8578|scavenger receptor class F, member 1##AK298737|SCARF1|8578|scavenger receptor class F, member 1##BC027923|SLC43A2|124935|solute carrier family 43, member 2##NM_152346|SLC43A2|124935|solute carrier family 43, member 2##BC071859|SLC43A2|124935|solute carrier family 43, member 2##AB007510|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##AF092565|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##BC000579|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##BC064370|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##NM_006445|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##NM_001164407|TLCD2|727910|TLC domain containing 2	0.175977	
chr2	50371533	50371660	reg1014856.p1	7.726	+	AY429104 BC096831 X68044 JN003607 BC118548 BC125270 M65085 S59900 M95489 AK292562 AK310367 NM_000145 NM_181446	-989986	-	S57793 M63108 M73746 AK123498 NM_000233	-1388752	-	AK302220 NM_001193487 NM_006872 BC025991 AK223350 AF106857 CU693090 DQ891566 DQ894756 BC064585	-1526621	+	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	203326	-	TSC_hg19_v1_chr2_-_51259258 BC046631	887662	-	EF539882 AK124726 NM_001135659 NM_004801	888008	-	AY429104|FSHR|2492|follicle stimulating hormone receptor##BC096831|FSHR|2492|follicle stimulating hormone receptor##X68044|FSHR|2492|follicle stimulating hormone receptor##JN003607|FSHR|2492|follicle stimulating hormone receptor##BC118548|FSHR|2492|follicle stimulating hormone receptor##BC125270|FSHR|2492|follicle stimulating hormone receptor##M65085|FSHR|2492|follicle stimulating hormone receptor##S59900|FSHR|2492|follicle stimulating hormone receptor##M95489|FSHR|2492|follicle stimulating hormone receptor##AK292562|FSHR|2492|follicle stimulating hormone receptor##AK310367|FSHR|2492|follicle stimulating hormone receptor##NM_000145|FSHR|2492|follicle stimulating hormone receptor##NM_181446|FSHR|2492|follicle stimulating hormone receptor##S57793|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M63108|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M73746|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK123498|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##NM_000233|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like##BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like##AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like##AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like##BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like##AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##BC046631|NRXN1|9378|neurexin 1##EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1	0.92204	CTCF.p2:23:0.922
chr4	71425079	71425185	reg1016403.p2	7.726	+	AB593161 AY358528 NM_212557 BC121812 BC121817	-40829	+	NM_152291 AK093828 AK312855 BX647190 BC025688 L13283	-87247	+	NM_001145007	-87458	+	NM_016519 AF209780 AF263464 AJ537437 AF219994 AK314918 BC106931 BC106932	32874	+	AF125373 NM_031889	69328	+	AB527699 DQ884395 TSC_hg19_v1_chr4_-_71532226 AK312014 BC038982	107102	-	AB593161|AMTN|401138|amelotin##AY358528|AMTN|401138|amelotin##NM_212557|AMTN|401138|amelotin##BC121812|AMTN|401138|amelotin##BC121817|AMTN|401138|amelotin##NM_152291|MUC7|4589|mucin 7, secreted##AK093828|MUC7|4589|mucin 7, secreted##AK312855|MUC7|4589|mucin 7, secreted##BX647190|MUC7|4589|mucin 7, secreted##BC025688|MUC7|4589|mucin 7, secreted##L13283|MUC7|4589|mucin 7, secreted##NM_001145007|MUC7|4589|mucin 7, secreted##NM_016519|AMBN|258|ameloblastin (enamel matrix protein)##AF209780|AMBN|258|ameloblastin (enamel matrix protein)##AF263464|AMBN|258|ameloblastin (enamel matrix protein)##AJ537437|AMBN|258|ameloblastin (enamel matrix protein)##AF219994|AMBN|258|ameloblastin (enamel matrix protein)##AK314918|AMBN|258|ameloblastin (enamel matrix protein)##BC106931|AMBN|258|ameloblastin (enamel matrix protein)##BC106932|AMBN|258|ameloblastin (enamel matrix protein)##AF125373|ENAM|10117|enamelin##NM_031889|ENAM|10117|enamelin##DQ884395|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##AK312014|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##BC038982|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides	0.997573	CTCF.p2:9:0.998
chr10	13829889	13830044	reg1017915.p1	7.725	+	TSC_hg19_v1_chr10_-_13749648 AK057828	-80277	-	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-200979	+	NM_003675 TSC_hg19_v1_chr10_+_13628948	-201023	+	TSC_hg19_v1_chr10_-_14050453 AK001072	220526	-	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	542884	-	TSC_hg19_v1_chr10_-_14646259 BC064407	816351	-	AK057828|FRMD4A|55691|FERM domain containing 4A##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK001072|FRMD4A|55691|FERM domain containing 4A##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B	0.311428	CTCF.p2:-35:0.311
chr21	44253661	44253777	reg1017458.p1	7.725	+	TSC_hg19_v1_chr21_+_44073730 NM_001001567 NM_001001568 NM_001001569 NM_001001570 NM_001001571 NM_001001572 NM_001001573 NM_001001574 NM_001001575 NM_001001576 NM_001001577 NM_001001578 NM_001001579 NM_001001580 NM_001001581 NM_001001582 NM_001001583 NM_001001584 NM_001001585 NM_002606 AF048837 AY701187 BC009047 AK314679 AY196299 AY196300 AY196301 AY196302 AY196303 AY196304 AY196305 AY196306 AY196307 AY196308 AY196309 AY196310 AY196311 AY196312 AY196313 AY196314 AK001307 AK294112 AF067223 AF067224 AF067225 AF067226 AB527758 AY242121 BT007016 GQ129331 GQ129332	-179932	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	-319716	+	AJ269529 NM_018964	-333978	+	AB590172 CU675357 DQ892967 DQ896215 TSC_hg19_v1_chr21_-_44299643 AK292923 AK315008 AJ243912 AJ243913 BC006341	45905	-	TSC_hg19_v1_chr21_-_44299690 BC001074 NM_018669 NM_033661 AK298015	45965	-	TSC_hg19_v1_chr21_+_44313422 NM_001001503 NM_021075 BC054016 BC021217 AK308228 AK289586 BC033766 CU676876 CU689730 CR542174 CR542190	59682	+	NM_001001567|PDE9A|5152|phosphodiesterase 9A##NM_001001568|PDE9A|5152|phosphodiesterase 9A##NM_001001569|PDE9A|5152|phosphodiesterase 9A##NM_001001570|PDE9A|5152|phosphodiesterase 9A##NM_001001571|PDE9A|5152|phosphodiesterase 9A##NM_001001572|PDE9A|5152|phosphodiesterase 9A##NM_001001573|PDE9A|5152|phosphodiesterase 9A##NM_001001574|PDE9A|5152|phosphodiesterase 9A##NM_001001575|PDE9A|5152|phosphodiesterase 9A##NM_001001576|PDE9A|5152|phosphodiesterase 9A##NM_001001577|PDE9A|5152|phosphodiesterase 9A##NM_001001578|PDE9A|5152|phosphodiesterase 9A##NM_001001579|PDE9A|5152|phosphodiesterase 9A##NM_001001580|PDE9A|5152|phosphodiesterase 9A##NM_001001581|PDE9A|5152|phosphodiesterase 9A##NM_001001582|PDE9A|5152|phosphodiesterase 9A##NM_001001583|PDE9A|5152|phosphodiesterase 9A##NM_001001584|PDE9A|5152|phosphodiesterase 9A##NM_001001585|PDE9A|5152|phosphodiesterase 9A##NM_002606|PDE9A|5152|phosphodiesterase 9A##AF048837|PDE9A|5152|phosphodiesterase 9A##AY701187|PDE9A|5152|phosphodiesterase 9A##BC009047|PDE9A|5152|phosphodiesterase 9A##AK314679|PDE9A|5152|phosphodiesterase 9A##AY196299|PDE9A|5152|phosphodiesterase 9A##AY196300|PDE9A|5152|phosphodiesterase 9A##AY196301|PDE9A|5152|phosphodiesterase 9A##AY196302|PDE9A|5152|phosphodiesterase 9A##AY196303|PDE9A|5152|phosphodiesterase 9A##AY196304|PDE9A|5152|phosphodiesterase 9A##AY196305|PDE9A|5152|phosphodiesterase 9A##AY196306|PDE9A|5152|phosphodiesterase 9A##AY196307|PDE9A|5152|phosphodiesterase 9A##AY196308|PDE9A|5152|phosphodiesterase 9A##AY196309|PDE9A|5152|phosphodiesterase 9A##AY196310|PDE9A|5152|phosphodiesterase 9A##AY196311|PDE9A|5152|phosphodiesterase 9A##AY196312|PDE9A|5152|phosphodiesterase 9A##AY196313|PDE9A|5152|phosphodiesterase 9A##AY196314|PDE9A|5152|phosphodiesterase 9A##AK001307|PDE9A|5152|phosphodiesterase 9A##AK294112|PDE9A|5152|phosphodiesterase 9A##AF067223|PDE9A|5152|phosphodiesterase 9A##AF067224|PDE9A|5152|phosphodiesterase 9A##AF067225|PDE9A|5152|phosphodiesterase 9A##AF067226|PDE9A|5152|phosphodiesterase 9A##AY242121|PDE9A|5152|phosphodiesterase 9A##BT007016|PDE9A|5152|phosphodiesterase 9A##GQ129331|PDE9A|5152|phosphodiesterase 9A##GQ129332|PDE9A|5152|phosphodiesterase 9A##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##DQ892967|WDR4|10785|WD repeat domain 4##DQ896215|WDR4|10785|WD repeat domain 4##AK292923|WDR4|10785|WD repeat domain 4##AK315008|WDR4|10785|WD repeat domain 4##AJ243912|WDR4|10785|WD repeat domain 4##AJ243913|WDR4|10785|WD repeat domain 4##BC006341|WDR4|10785|WD repeat domain 4##BC001074|WDR4|10785|WD repeat domain 4##NM_018669|WDR4|10785|WD repeat domain 4##NM_033661|WDR4|10785|WD repeat domain 4##AK298015|WDR4|10785|WD repeat domain 4##NM_001001503|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##NM_021075|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC054016|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC021217|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK308228|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK289586|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC033766|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542174|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542190|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa	0.0	
chr7	133119138	133119277	reg1019332.p1	7.725	+	TSC_hg19_v1_chr7_+_132937838 NM_001037126 NM_021807 AF380839 AK027688 AL831989 AK298191 BC067263 BC026174 CU693148 AB051486	-181358	+	TSC_hg19_v1_chr7_-_132766851 BC011596 BC014839 AK129533	-352361	-	AB528286 TSC_hg19_v1_chr7_-_132766813 AK294071 AK000427 NM_017812 AK310236	-352443	-	BC104897 BC104899 AK057348 NM_144648	692870	+	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	882416	-	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	882580	-	NM_001037126|EXOC4|60412|exocyst complex component 4##NM_021807|EXOC4|60412|exocyst complex component 4##AF380839|EXOC4|60412|exocyst complex component 4##AK027688|EXOC4|60412|exocyst complex component 4##AL831989|EXOC4|60412|exocyst complex component 4##AK298191|EXOC4|60412|exocyst complex component 4##BC067263|EXOC4|60412|exocyst complex component 4##BC026174|EXOC4|60412|exocyst complex component 4##AB051486|EXOC4|60412|exocyst complex component 4##BC011596|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC014839|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK129533|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK294071|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK000427|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##NM_017812|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK310236|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4	0.179455	
chrX	29496900	29497032	reg1020504.p1	7.725	+	AF181284 AJ243874 NM_014271	-891347	+	AK128123 NM_001017930	-1497401	-	AK057527 NM_182506 BC101307 BC101309 BC101310	-1670851	+	NM_002364 AF015766 AK313347 BC026071 AK223081	736717	+	AK057441 NM_002365	751586	+	NM_002367 AK313769 BC032852 DQ891236 DQ894421 CR541779	763188	+	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##NM_002364|MAGEB2|4113|melanoma antigen family B, 2##AF015766|MAGEB2|4113|melanoma antigen family B, 2##AK313347|MAGEB2|4113|melanoma antigen family B, 2##BC026071|MAGEB2|4113|melanoma antigen family B, 2##AK223081|MAGEB2|4113|melanoma antigen family B, 2##AK057441|MAGEB3|4114|melanoma antigen family B, 3##NM_002365|MAGEB3|4114|melanoma antigen family B, 3##NM_002367|MAGEB4|4115|melanoma antigen family B, 4##AK313769|MAGEB4|4115|melanoma antigen family B, 4##BC032852|MAGEB4|4115|melanoma antigen family B, 4##DQ891236|MAGEB4|4115|melanoma antigen family B, 4##DQ894421|MAGEB4|4115|melanoma antigen family B, 4##CR541779|MAGEB4|4115|melanoma antigen family B, 4	0.646101	CTCF.p2:9:0.646
chr1	44396267	44396385	reg1019763.p1	7.724	+	AK301829 AY051143 NM_006279 NM_174963 NM_174964 NM_174965 NM_174966 NM_174967 NM_174968 NM_174969 NM_174970 NM_174971 TSC_hg19_v1_chr1_+_44173217 BC050380	-223108	+	TSC_hg19_v1_chr1_-_44173037 BC094867	-223303	-	BC002558 TSC_hg19_v1_chr1_+_44115828 AB014577	-280482	+	AF120274 NM_001136215 NM_057090 NM_057091	2665	+	TSC_hg19_v1_chr1_+_44412483 NM_014652	16135	+	TSC_hg19_v1_chr1_+_44412625 AB018267	16284	+	AK301829|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##AY051143|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_006279|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174963|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174964|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174965|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174966|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174967|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174968|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174969|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174970|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174971|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC050380|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC094867|LOC100132774|100132774|uncharacterized LOC100132774##BC002558|KDM4A|9682|lysine (K)-specific demethylase 4A##AB014577|KDM4A|9682|lysine (K)-specific demethylase 4A##AF120274|ARTN|9048|artemin##NM_001136215|ARTN|9048|artemin##NM_057090|ARTN|9048|artemin##NM_057091|ARTN|9048|artemin##NM_014652|IPO13|9670|importin 13##AB018267|IPO13|9670|importin 13	0.027427	
chr21	38593530	38593679	reg1017699.p3	7.724	+	BC029827 TSC_hg19_v1_chr21_+_38593064	-545	+	D83077 NM_003316	-138358	+	TSC_hg19_v1_chr21_+_38445570 AK297921 BC092466 NM_001001894 AK291992 AK299991	-147987	+	TSC_hg19_v1_chr21_-_38639617 AK316460 AK299662	46004	-	TSC_hg19_v1_chr21_-_38639642 AJ001867 AK300024 AK312707 D87343 NM_006052 AK303624	46224	-	TSC_hg19_v1_chr21_-_38640233 BX648191 BC110655	46631	-	BC029827|DSCR9|257203|Down syndrome critical region gene 9 (non-protein coding)##D83077|TTC3|7267|tetratricopeptide repeat domain 3##NM_003316|TTC3|7267|tetratricopeptide repeat domain 3##AK297921|TTC3|7267|tetratricopeptide repeat domain 3##BC092466|TTC3|7267|tetratricopeptide repeat domain 3##NM_001001894|TTC3|7267|tetratricopeptide repeat domain 3##AK291992|TTC3|7267|tetratricopeptide repeat domain 3##AK299991|TTC3|7267|tetratricopeptide repeat domain 3##AK316460|DSCR3|10311|Down syndrome critical region gene 3##AK299662|DSCR3|10311|Down syndrome critical region gene 3##AJ001867|DSCR3|10311|Down syndrome critical region gene 3##AK300024|DSCR3|10311|Down syndrome critical region gene 3##AK312707|DSCR3|10311|Down syndrome critical region gene 3##D87343|DSCR3|10311|Down syndrome critical region gene 3##NM_006052|DSCR3|10311|Down syndrome critical region gene 3##AK303624|DSCR3|10311|Down syndrome critical region gene 3##BX648191|DSCR3|10311|Down syndrome critical region gene 3##BC110655|DSCR3|10311|Down syndrome critical region gene 3	0.0	
chr4	47707732	47707864	reg1019494.p1	7.723	+	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	-220468	+	TSC_hg19_v1_chr4_-_47465720 BC008371	-242070	-	TSC_hg19_v1_chr4_-_47465683 AY542163 BC015145 NM_017845 AK000509 BC019826 AF182421	-242119	-	TSC_hg19_v1_chr4_+_47708352 D28417	556	+	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	132292	-	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	208797	-	BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D##BC008371|COMMD8|54951|COMM domain containing 8##AY542163|COMMD8|54951|COMM domain containing 8##BC015145|COMMD8|54951|COMM domain containing 8##NM_017845|COMMD8|54951|COMM domain containing 8##AK000509|COMMD8|54951|COMM domain containing 8##BC019826|COMMD8|54951|COMM domain containing 8##AF182421|COMMD8|54951|COMM domain containing 8##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1	0.73958	CTCF.p2:8:0.740
chr4	90176043	90176144	reg1016674.p1	7.723	+	AK027653 NM_145715	-142126	+	AK091881 AX747234 TSC_hg19_v1_chr4_-_90032571	-143534	-	CU687656 BC063126 BC041029 BC053569 BX647410 NM_014883	-197874	-	AK124616 TSC_hg19_v1_chr4_-_90228950	52858	-	TSC_hg19_v1_chr4_-_90229171 NM_198281	53064	-	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	582149	-	AK027653|TIGD2|166815|tigger transposable element derived 2##NM_145715|TIGD2|166815|tigger transposable element derived 2##AK091881|FAM13A|10144|family with sequence similarity 13, member A##BC063126|FAM13A|10144|family with sequence similarity 13, member A##BC041029|FAM13A|10144|family with sequence similarity 13, member A##BC053569|FAM13A|10144|family with sequence similarity 13, member A##BX647410|FAM13A|10144|family with sequence similarity 13, member A##NM_014883|FAM13A|10144|family with sequence similarity 13, member A##AK124616|GPRIN3|285513|GPRIN family member 3##NM_198281|GPRIN3|285513|GPRIN family member 3##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)	0.998532	CTCF.p2:12:0.999
chr5	112666352	112666498	reg1018593.p1	7.723	+	TSC_hg19_v1_chr5_-_112630624 BC009279 BC018919 NM_002387 AK300259	-35816	-	M62397 AK096212 TSC_hg19_v1_chr5_-_112630346	-36100	-	TSC_hg19_v1_chr5_+_112312506 AY135173 AY146650 BC017965 AK296361 AK090564 AX746512 BC064593 BC068042 CU687920	-353897	+	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	104207	-	AK128596 NM_001085377	158101	-	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	182971	+	BC009279|MCC|4163|mutated in colorectal cancers##BC018919|MCC|4163|mutated in colorectal cancers##NM_002387|MCC|4163|mutated in colorectal cancers##AK300259|MCC|4163|mutated in colorectal cancers##M62397|MCC|4163|mutated in colorectal cancers##AK096212|MCC|4163|mutated in colorectal cancers##AY135173|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY146650|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC017965|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK296361|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK090564|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC064593|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC068042|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B##AK128596|MCC|4163|mutated in colorectal cancers##NM_001085377|MCC|4163|mutated in colorectal cancers##AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2	0.958981	CTCF.p2:20:0.959
chr1	152558164	152558232	reg1023999.p1	7.722	+	BC101784 BC069291 AB048288 NM_032563	-5228	-	BC131716 NM_178435	-18961	-	AJ243662 NM_019060	-71221	+	BC130365 BC130367 NM_178434 HQ258028	14974	+	NM_178433	28088	+	AB528786 BC120933 BC120934 NM_178431	37380	-	BC101784|LCE3D|84648|late cornified envelope 3D##BC069291|LCE3D|84648|late cornified envelope 3D##AB048288|LCE3D|84648|late cornified envelope 3D##NM_032563|LCE3D|84648|late cornified envelope 3D##BC131716|LCE3E|353145|late cornified envelope 3E##NM_178435|LCE3E|353145|late cornified envelope 3E##AJ243662|CRCT1|54544|cysteine-rich C-terminal 1##NM_019060|CRCT1|54544|cysteine-rich C-terminal 1##BC130365|LCE3C|353144|late cornified envelope 3C##BC130367|LCE3C|353144|late cornified envelope 3C##NM_178434|LCE3C|353144|late cornified envelope 3C##HQ258028|LCE3C|353144|late cornified envelope 3C##NM_178433|LCE3B|353143|late cornified envelope 3B##AB528786|LCE3A|353142|late cornified envelope 3A##BC120933|LCE3A|353142|late cornified envelope 3A##BC120934|LCE3A|353142|late cornified envelope 3A##NM_178431|LCE3A|353142|late cornified envelope 3A	0.741274	CTCF.p2:35:0.741
chr15	90514905	90515036	reg1020970.p1	7.722	+	AK093274 AX748027 CU691000 TSC_hg19_v1_chr15_-_90456145 AK000495 BC053602 NM_001199058 NM_182616	-58865	-	NM_005829	-77354	-	TSC_hg19_v1_chr15_-_90437227 DQ892982 DQ896230 BC002785 AL110108 BC007773 AK222698 AK294712 X99459 BC010020 AK312467	-77753	-	TSC_hg19_v1_chr15_+_90544707 BC020301 AK094712 NM_198526	29719	+	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	130692	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	130735	-	AK093274|C15orf38|348110|chromosome 15 open reading frame 38##AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##BC053602|C15orf38|348110|chromosome 15 open reading frame 38##NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##NM_182616|C15orf38|348110|chromosome 15 open reading frame 38##NM_005829|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ892982|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ896230|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC002785|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AL110108|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC007773|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK222698|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK294712|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##X99459|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC010020|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK312467|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC020301|ZNF710|374655|zinc finger protein 710##AK094712|ZNF710|374655|zinc finger protein 710##NM_198526|ZNF710|374655|zinc finger protein 710##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial	0.467224	CTCF.p2:-3:0.467
chr19	18302861	18303014	reg1020381.p1	7.722	+	TSC_hg19_v1_chr19_+_18284633 AB590284 CU676848 CU689078 DQ884410 DQ892016 DQ895206	-18296	+	TSC_hg19_v1_chr19_+_18284622 BC021136 BC031020 AF097362	-18316	+	NM_006332 TSC_hg19_v1_chr19_+_18284600 AB049659 AK291551	-18346	+	TSC_hg19_v1_chr19_+_18304077 NM_032683 BC093008 BC005064 BC028146 AF320622 AF416712 AK094091	1098	+	M28210 TSC_hg19_v1_chr19_-_18314858 AF254795 BC011782 AK293467 AK289559 NM_002866	11867	-	NM_001098819 U88712	32365	-	DQ884410|IFI30|10437|interferon, gamma-inducible protein 30##DQ892016|IFI30|10437|interferon, gamma-inducible protein 30##DQ895206|IFI30|10437|interferon, gamma-inducible protein 30##BC021136|IFI30|10437|interferon, gamma-inducible protein 30##BC031020|IFI30|10437|interferon, gamma-inducible protein 30##NM_006332|IFI30|10437|interferon, gamma-inducible protein 30##AB049659|IFI30|10437|interferon, gamma-inducible protein 30##AK291551|IFI30|10437|interferon, gamma-inducible protein 30##NM_032683|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC093008|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC005064|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC028146|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AF320622|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AF416712|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AK094091|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##M28210|RAB3A|5864|RAB3A, member RAS oncogene family##AF254795|RAB3A|5864|RAB3A, member RAS oncogene family##BC011782|RAB3A|5864|RAB3A, member RAS oncogene family##AK293467|RAB3A|5864|RAB3A, member RAS oncogene family##AK289559|RAB3A|5864|RAB3A, member RAS oncogene family##NM_002866|RAB3A|5864|RAB3A, member RAS oncogene family##NM_001098819|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U88712|PDE4C|5143|phosphodiesterase 4C, cAMP-specific	0.114475	
chr7	85379839	85379936	reg1017514.p1	7.722	+	AK309116 TSC_hg19_v1_chr7_-_84816296	-563652	-	NM_152754	-628641	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-1555565	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	893338	+	AK291406 TSC_hg19_v1_chr7_+_86273870	893984	+	AK294701 TSC_hg19_v1_chr7_+_86274004 BC022496	894104	+	AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3##AK291406|GRM3|2913|glutamate receptor, metabotropic 3##AK294701|GRM3|2913|glutamate receptor, metabotropic 3##BC022496|GRM3|2913|glutamate receptor, metabotropic 3	0.91068	CTCF.p2:8:0.911
chr8	24369154	24369301	reg1020718.p1	7.722	+	BC058037 AK292492 NM_003817 AF215824 CU691292 AB527100	-70696	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	-127320	+	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	-217620	+	TSC_hg19_v1_chr8_+_24771273 AK296226 BC071752 EF560736 NM_005382	402044	+	EF560737 TSC_hg19_v1_chr8_+_24771276 BC096757 GQ129242 GQ129243 AB527839	402064	+	BC002421 TSC_hg19_v1_chr8_-_24772396 AK308605	403096	-	BC058037|ADAM7|8756|ADAM metallopeptidase domain 7##AK292492|ADAM7|8756|ADAM metallopeptidase domain 7##NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7##AF215824|ADAM7|8756|ADAM metallopeptidase domain 7##NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##AK296226|NEFM|4741|neurofilament, medium polypeptide##BC071752|NEFM|4741|neurofilament, medium polypeptide##EF560736|NEFM|4741|neurofilament, medium polypeptide##NM_005382|NEFM|4741|neurofilament, medium polypeptide##EF560737|NEFM|4741|neurofilament, medium polypeptide##BC096757|NEFM|4741|neurofilament, medium polypeptide##GQ129242|NEFM|4741|neurofilament, medium polypeptide##GQ129243|NEFM|4741|neurofilament, medium polypeptide##BC002421|NEFM|4741|neurofilament, medium polypeptide	0.414304	CTCF.p2:-5:0.414
chrX	153536826	153536923	reg1015675.p1	7.722	+	NM_001145934	-3466	+	NM_001145933 NM_012253 AK301724 TSC_hg19_v1_chrX_+_153524147 AK292261 AK302044 BC025382 AK302261 AK292224 AB527362 AM392578 AM393533 CU692986	-12755	+	DQ655913 TSC_hg19_v1_chrX_-_153523933	-13009	-	TSC_hg19_v1_chrX_-_153599586 AB191259 AB371575 AB371577 AB371578 AB371579 AB191260 AB371574 AB371576 AB463042 AK090427	62741	-	TSC_hg19_v1_chrX_-_153599726 AB593010	62848	-	X53416 TSC_hg19_v1_chrX_-_153602972	66076	-	NM_001145934|TKTL1|8277|transketolase-like 1##NM_001145933|TKTL1|8277|transketolase-like 1##NM_012253|TKTL1|8277|transketolase-like 1##AK301724|TKTL1|8277|transketolase-like 1##AK292261|TKTL1|8277|transketolase-like 1##AK302044|TKTL1|8277|transketolase-like 1##BC025382|TKTL1|8277|transketolase-like 1##AK302261|TKTL1|8277|transketolase-like 1##AK292224|TKTL1|8277|transketolase-like 1##AM392578|TKTL1|8277|transketolase-like 1##AM393533|TKTL1|8277|transketolase-like 1##DQ655913|TEX28|1527|testis expressed 28##AB191259|FLNA|2316|filamin A, alpha##AB371575|FLNA|2316|filamin A, alpha##AB371577|FLNA|2316|filamin A, alpha##AB371578|FLNA|2316|filamin A, alpha##AB371579|FLNA|2316|filamin A, alpha##AB191260|FLNA|2316|filamin A, alpha##AB371574|FLNA|2316|filamin A, alpha##AB371576|FLNA|2316|filamin A, alpha##AK090427|FLNA|2316|filamin A, alpha##AB593010|FLNA|2316|filamin A, alpha##X53416|FLNA|2316|filamin A, alpha	0.822224	CTCF.p2:-3:0.822
chr18	38515532	38515638	reg1016117.p1	7.721	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-1135317	-	TSC_hg19_v1_chr18_-_36915657 D28405	-1599929	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	-3369586	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	1019614	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	1019648	+	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	2179984	-	AK090603|LOC647946|647946|uncharacterized LOC647946##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2	0.535919	CTCF.p2:-9:0.536
chr1	86360473	86360596	reg1019545.p1	7.721	+	TSC_hg19_v1_chr1_-_86174088 AL442074 BC026236 AK298149 NM_001170670 NM_017953	-186421	-	EU446811 AK000767 TSC_hg19_v1_chr1_-_86174035 BC110898 AK314566	-186528	-	TSC_hg19_v1_chr1_+_86046443 AK223385 AK295430 AK314571 NM_001554 BC016952 Y12084 Z98053 Y11307 BC009199 U62015 BC001271 AF003594 AF031385 DQ891262 DQ894449 AB587390 CR536519 CU677777	-313983	+	BC116180 BC113654 BC117170 BC143715 BC143717 BC143718 AY244357 NM_152890	261579	-	BC091490 TSC_hg19_v1_chr1_-_86862004 AB033055 BC047368 BC009779 BC012579 AK308351 AK302792 BC026105 AK303209 NM_001007022 NM_001184765 NM_001184766 NM_020729	501441	-	NM_006536 AF043977 AK296719 AK290348 AK307937 BC041096 AB026833 AF127980	529315	+	AL442074|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC026236|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK298149|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_001170670|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_017953|ZNHIT6|54680|zinc finger, HIT-type containing 6##EU446811|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK000767|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC110898|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK314566|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61##NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61##Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61##Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61##Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61##U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61##DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61##DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61##CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC116180|COL24A1|255631|collagen, type XXIV, alpha 1##BC113654|COL24A1|255631|collagen, type XXIV, alpha 1##BC117170|COL24A1|255631|collagen, type XXIV, alpha 1##BC143715|COL24A1|255631|collagen, type XXIV, alpha 1##BC143717|COL24A1|255631|collagen, type XXIV, alpha 1##BC143718|COL24A1|255631|collagen, type XXIV, alpha 1##AY244357|COL24A1|255631|collagen, type XXIV, alpha 1##NM_152890|COL24A1|255631|collagen, type XXIV, alpha 1##BC091490|ODF2L|57489|outer dense fiber of sperm tails 2-like##AB033055|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC047368|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC009779|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC012579|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK308351|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK302792|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC026105|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK303209|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001007022|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184765|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184766|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_020729|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_006536|CLCA2|9635|chloride channel accessory 2##AF043977|CLCA2|9635|chloride channel accessory 2##AK290348|CLCA2|9635|chloride channel accessory 2##AK307937|CLCA2|9635|chloride channel accessory 2##BC041096|CLCA2|9635|chloride channel accessory 2##AB026833|CLCA2|9635|chloride channel accessory 2##AF127980|CLCA2|9635|chloride channel accessory 2	0.262949	CTCF.p2:3:0.263
chr4	141281075	141281222	reg1009257.p1	7.721	+	NM_001153446 NM_001153635 BC062684 NM_001153585 NM_001153690	-16543	+	AK027797 NM_032547	-102709	+	NM_018717 TSC_hg19_v1_chr4_-_141075339	-205816	-	NM_001153484 NM_001153552 NM_001153663 TSC_hg19_v1_chr4_+_141294715	13548	+	TSC_hg19_v1_chr4_+_141294799 AF330205 AF448857 AB015335	13620	+	TSC_hg19_v1_chr4_+_141294802 BC016511	13667	+	NM_001153446|SCOC|60592|short coiled-coil protein##NM_001153635|SCOC|60592|short coiled-coil protein##BC062684|SCOC|60592|short coiled-coil protein##NM_001153585|SCOC|60592|short coiled-coil protein##NM_001153690|SCOC|60592|short coiled-coil protein##AK027797|SCOC|60592|short coiled-coil protein##NM_032547|SCOC|60592|short coiled-coil protein##NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)##NM_001153484|SCOC|60592|short coiled-coil protein##NM_001153552|SCOC|60592|short coiled-coil protein##NM_001153663|SCOC|60592|short coiled-coil protein##AF330205|SCOC|60592|short coiled-coil protein##AF448857|SCOC|60592|short coiled-coil protein##AB015335|SCOC|60592|short coiled-coil protein##BC016511|SCOC|60592|short coiled-coil protein	0.993157	CTCF.p2:-11:0.993
chr1	157281072	157281159	reg1014925.p1	7.720	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-172832	-	TSC_hg19_v1_chr1_-_157108158 L16464	-172965	-	AK131392 NM_001004341	-211516	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	241115	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	286686	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	389412	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.464558	CTCF.p2:-5:0.465
chr4	85671549	85671697	reg1020947.p1	7.719	+	NM_001263 U65887	-167530	+	NM_006168	-252237	-	TSC_hg19_v1_chr4_+_84457420 DQ345298 BC090956 AY358100 NM_032717 DQ324782	-1214042	+	NM_014991	215920	-	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	724720	+	TSC_hg19_v1_chr4_+_86699850 NM_001042669	1028225	+	NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_006168|NKX6-1|4825|NK6 homeobox 1##DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24##NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24	0.960023	CTCF.p2:-9:0.960
chr12	20617004	20617111	reg1016344.p1	7.717	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	-94859	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-1023869	+	TSC_hg19_v1_chr12_+_19592783 AB209384	-1024262	+	AK308317 NM_001244683	107740	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	231438	+	BC058006 BC105597 NM_019844 BC022843 AK055874 BC070264	346591	+	BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC058006|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC105597|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_019844|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC022843|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##AK055874|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC070264|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3	0.97931	CTCF.p2:0:0.979
chr19	21385797	21385933	reg1019539.p1	7.717	+	BX647597 TSC_hg19_v1_chr19_+_21324836 AK308127 NM_133473 AK293072 AB075849 BC065374 BC040506	-61009	+	NM_182515 AL834415 TSC_hg19_v1_chr19_+_21264973 AK056006 BC022527 BC037782 BC050468 BC064985	-120862	+	AK290475 NM_001172671 NM_025189 TSC_hg19_v1_chr19_+_21203432 AK023721 AX721141 AY269787 BC111776	-182384	+	TSC_hg19_v1_chr19_-_21512183 AK128184 AK131527 NM_021269 AK095062 BX647526	126328	-	BC034499 TSC_hg19_v1_chr19_+_21541801 AK027579 AK291002 AK291193	155915	+	TSC_hg19_v1_chr19_+_21579931 NM_001076678 NM_145326 NM_175910 BX648842 AK092178 AK128494 AB209086 BC006408 BC022394 AX721142 EU446562	194096	+	BX647597|ZNF431|170959|zinc finger protein 431##AK308127|ZNF431|170959|zinc finger protein 431##NM_133473|ZNF431|170959|zinc finger protein 431##AK293072|ZNF431|170959|zinc finger protein 431##AB075849|ZNF431|170959|zinc finger protein 431##BC040506|ZNF431|170959|zinc finger protein 431##NM_182515|ZNF714|148206|zinc finger protein 714##AK056006|ZNF714|148206|zinc finger protein 714##BC022527|ZNF714|148206|zinc finger protein 714##BC037782|ZNF714|148206|zinc finger protein 714##BC050468|ZNF714|148206|zinc finger protein 714##BC064985|ZNF714|148206|zinc finger protein 714##AK290475|ZNF430|80264|zinc finger protein 430##NM_001172671|ZNF430|80264|zinc finger protein 430##NM_025189|ZNF430|80264|zinc finger protein 430##AK023721|ZNF430|80264|zinc finger protein 430##AY269787|ZNF430|80264|zinc finger protein 430##BC111776|ZNF430|80264|zinc finger protein 430##AK128184|ZNF708|7562|zinc finger protein 708##AK131527|ZNF708|7562|zinc finger protein 708##NM_021269|ZNF708|7562|zinc finger protein 708##BX647526|ZNF708|7562|zinc finger protein 708##BC034499|ZNF738|148203|zinc finger protein 738##AK027579|ZNF738|148203|zinc finger protein 738##AK291002|ZNF738|148203|zinc finger protein 738##AK291193|ZNF738|148203|zinc finger protein 738##NM_001076678|ZNF493|284443|zinc finger protein 493##NM_145326|ZNF493|284443|zinc finger protein 493##NM_175910|ZNF493|284443|zinc finger protein 493##BX648842|ZNF493|284443|zinc finger protein 493##AK092178|ZNF493|284443|zinc finger protein 493##AK128494|ZNF493|284443|zinc finger protein 493##AB209086|ZNF493|284443|zinc finger protein 493##BC006408|ZNF493|284443|zinc finger protein 493##BC022394|ZNF493|284443|zinc finger protein 493##EU446562|ZNF493|284443|zinc finger protein 493	0.210001	CTCF.p2:5:0.210
chr11	15792499	15792617	reg1012639.p1	7.716	+	AB236158 NM_001042536	-656075	+	AB236159 NM_001031853	-658589	+	BC008428 AK291188 BC092468 NM_000728	-697432	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	631843	-	BC037866 NM_001145811	637869	-	AF309034 NM_033326	705367	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	0.945937	CTCF.p2:-4:0.946
chr18	31075393	31075529	reg1018287.p2	7.716	+	BC062719 BC091517 AK126038 NM_198995	-54802	-	BC130535 BC144178 BC144179 NM_001105528	-55449	-	BC021267 AB037805 NM_020805	-722554	-	BX648108 TSC_hg19_v1_chr18_-_31158297	82768	-	NM_030632 AK131454	83098	+	AB051500 TSC_hg19_v1_chr18_+_31319257	243745	+	BC062719|C18orf34|374864|chromosome 18 open reading frame 34##BC091517|C18orf34|374864|chromosome 18 open reading frame 34##AK126038|C18orf34|374864|chromosome 18 open reading frame 34##NM_198995|C18orf34|374864|chromosome 18 open reading frame 34##BC130535|C18orf34|374864|chromosome 18 open reading frame 34##BC144178|C18orf34|374864|chromosome 18 open reading frame 34##BC144179|C18orf34|374864|chromosome 18 open reading frame 34##NM_001105528|C18orf34|374864|chromosome 18 open reading frame 34##BC021267|KLHL14|57565|kelch-like 14 (Drosophila)##AB037805|KLHL14|57565|kelch-like 14 (Drosophila)##NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)##NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)##AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)##AB051500|ASXL3|80816|additional sex combs like 3 (Drosophila)	0.019339	
chr3	108769586	108769701	reg1016701.p2	7.716	+	AF110003 EU832759 GQ129299 AF110002 BC103993 BC103994 AB593147 NM_005459	-97032	-	AK291991 AJ240085 AF161547 NM_016388 BC025713 AJ224878	-228049	+	HQ258043 AM050721 BC113502 BC113528 BC069318 AF290873 AF323084 AY358655 NM_032579 TSC_hg19_v1_chr3_-_108476258	-293498	-	CU690636 BC050307 AK302642 AF084946 BC028680 NM_014429	67307	-	AK026416 TSC_hg19_v1_chr3_+_108855566	85920	+	BC018070 AY283672 NM_138815	265658	-	AF110003|GUCA1C|9626|guanylate cyclase activator 1C##EU832759|GUCA1C|9626|guanylate cyclase activator 1C##GQ129299|GUCA1C|9626|guanylate cyclase activator 1C##AF110002|GUCA1C|9626|guanylate cyclase activator 1C##BC103993|GUCA1C|9626|guanylate cyclase activator 1C##BC103994|GUCA1C|9626|guanylate cyclase activator 1C##AB593147|GUCA1C|9626|guanylate cyclase activator 1C##NM_005459|GUCA1C|9626|guanylate cyclase activator 1C##AK291991|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ240085|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AF161547|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##NM_016388|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##BC025713|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ224878|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##HQ258043|RETNLB|84666|resistin like beta##AM050721|RETNLB|84666|resistin like beta##BC113502|RETNLB|84666|resistin like beta##BC113528|RETNLB|84666|resistin like beta##BC069318|RETNLB|84666|resistin like beta##AF290873|RETNLB|84666|resistin like beta##AF323084|RETNLB|84666|resistin like beta##AY358655|RETNLB|84666|resistin like beta##NM_032579|RETNLB|84666|resistin like beta##BC050307|MORC1|27136|MORC family CW-type zinc finger 1##AK302642|MORC1|27136|MORC family CW-type zinc finger 1##AF084946|MORC1|27136|MORC family CW-type zinc finger 1##BC028680|MORC1|27136|MORC family CW-type zinc finger 1##NM_014429|MORC1|27136|MORC family CW-type zinc finger 1##AK026416|FLJ22763|401081|uncharacterized LOC401081##BC018070|DPPA2|151871|developmental pluripotency associated 2##AY283672|DPPA2|151871|developmental pluripotency associated 2##NM_138815|DPPA2|151871|developmental pluripotency associated 2	0.587081	CTCF.p2:-17:0.587
chr3	38038429	38038557	reg1016912.p1	7.716	+	TSC_hg19_v1_chr3_+_38035642 AK309304	-2831	+	NM_015873	-3416	+	TSC_hg19_v1_chr3_+_38032276 BC004300	-6217	+	TSC_hg19_v1_chr3_-_38066000 AK090774 AX746610	27537	-	NM_001130964	27784	-	AB385114 BC056157 AB209862 U09117 BC050382 AK098690 AK127813 AK292324 NM_006225 TSC_hg19_v1_chr3_-_38071155	32599	-	AK309304|VILL|50853|villin-like##NM_015873|VILL|50853|villin-like##BC004300|VILL|50853|villin-like##AK090774|PLCD1|5333|phospholipase C, delta 1##NM_001130964|PLCD1|5333|phospholipase C, delta 1##AB209862|PLCD1|5333|phospholipase C, delta 1##U09117|PLCD1|5333|phospholipase C, delta 1##BC050382|PLCD1|5333|phospholipase C, delta 1##AK098690|PLCD1|5333|phospholipase C, delta 1##AK127813|PLCD1|5333|phospholipase C, delta 1##AK292324|PLCD1|5333|phospholipase C, delta 1##NM_006225|PLCD1|5333|phospholipase C, delta 1	0.3009	CTCF.p2:24:0.301
chr3	7186518	7186661	reg1021739.p1	7.716	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	-283691	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	-283790	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-1957098	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	1356741	-	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	1356926	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	1356992	+	X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1	0.051117	
chr9	34664411	34664537	reg1018199.p1	7.716	+	AF082393 BC148263 AJ243542 AB010445 NM_006664	-1816	-	TSC_hg19_v1_chr9_+_34653922 AK075530 AK292073 BC003110 NM_004512 NM_147162 U32324	-10551	+	TSC_hg19_v1_chr9_+_34652201 NM_001142784	-12310	+	CR456868 U77180 AB590424 DQ895236 EU176240 U88321 BC027968 AK311945 AX772806 AB000887 NM_006274	26730	-	AF001979 CR450326 AB463486 DQ892048 DQ895242 AY358887 U88320 BC027918 AB002409 AK311901 TSC_hg19_v1_chr9_-_34710134 NM_002989	45630	-	AK301951 AK302320 NM_001141917	65024	-	AF082393|CCL27|10850|chemokine (C-C motif) ligand 27##BC148263|CCL27|10850|chemokine (C-C motif) ligand 27##AJ243542|CCL27|10850|chemokine (C-C motif) ligand 27##AB010445|CCL27|10850|chemokine (C-C motif) ligand 27##NM_006664|CCL27|10850|chemokine (C-C motif) ligand 27##AK075530|IL11RA|3590|interleukin 11 receptor, alpha##AK292073|IL11RA|3590|interleukin 11 receptor, alpha##BC003110|IL11RA|3590|interleukin 11 receptor, alpha##NM_004512|IL11RA|3590|interleukin 11 receptor, alpha##NM_147162|IL11RA|3590|interleukin 11 receptor, alpha##U32324|IL11RA|3590|interleukin 11 receptor, alpha##NM_001142784|IL11RA|3590|interleukin 11 receptor, alpha##CR456868|CCL19|6363|chemokine (C-C motif) ligand 19##U77180|CCL19|6363|chemokine (C-C motif) ligand 19##DQ895236|CCL19|6363|chemokine (C-C motif) ligand 19##EU176240|CCL19|6363|chemokine (C-C motif) ligand 19##U88321|CCL19|6363|chemokine (C-C motif) ligand 19##BC027968|CCL19|6363|chemokine (C-C motif) ligand 19##AK311945|CCL19|6363|chemokine (C-C motif) ligand 19##AX772806|CCL19|6363|chemokine (C-C motif) ligand 19##AB000887|CCL19|6363|chemokine (C-C motif) ligand 19##NM_006274|CCL19|6363|chemokine (C-C motif) ligand 19##AF001979|CCL21|6366|chemokine (C-C motif) ligand 21##CR450326|CCL21|6366|chemokine (C-C motif) ligand 21##DQ892048|CCL21|6366|chemokine (C-C motif) ligand 21##DQ895242|CCL21|6366|chemokine (C-C motif) ligand 21##AY358887|CCL21|6366|chemokine (C-C motif) ligand 21##U88320|CCL21|6366|chemokine (C-C motif) ligand 21##BC027918|CCL21|6366|chemokine (C-C motif) ligand 21##AB002409|CCL21|6366|chemokine (C-C motif) ligand 21##AK311901|CCL21|6366|chemokine (C-C motif) ligand 21##NM_002989|CCL21|6366|chemokine (C-C motif) ligand 21##AK302320|FAM205A|259308|family with sequence similarity 205, member A##NM_001141917|FAM205A|259308|family with sequence similarity 205, member A	0.954665	CTCF.p2:3:0.955
chr3	81715797	81715926	reg1020086.p1	7.715	+	NM_002941	-1898803	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-2647274	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-3048876	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	94836	-	TSC_hg19_v1_chr3_-_81810798 AK312245	94937	-	TSC_hg19_v1_chr3_-_81810802 AK297939	94944	-	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.082831	
chr1	154916355	154916511	reg1018084.p2	7.714	+	TSC_hg19_v1_chr1_-_154909401 BC007694 BC000237 AK130234 AK312803 BC006089 NM_006556	-7000	-	BT019976 CR541998 TSC_hg19_v1_chr1_-_154909187 L77213	-7259	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	-73687	-	TSC_hg19_v1_chr1_-_154928571 BC016852 NM_020524 AF221521 AK023219 AK303413 AK303863 AK300987	12146	-	TSC_hg19_v1_chr1_-_154928604 AK022497 AK300544 AK310712 AK315551	12178	-	AF289598 AF457208 AB528446 DQ893379 DQ895952 TSC_hg19_v1_chr1_-_154934210 AK092389 AX747515 BC006132 BC032099	17698	-	BC007694|PMVK|10654|phosphomevalonate kinase##AK130234|PMVK|10654|phosphomevalonate kinase##AK312803|PMVK|10654|phosphomevalonate kinase##BC006089|PMVK|10654|phosphomevalonate kinase##NM_006556|PMVK|10654|phosphomevalonate kinase##BT019976|PMVK|10654|phosphomevalonate kinase##CR541998|PMVK|10654|phosphomevalonate kinase##L77213|PMVK|10654|phosphomevalonate kinase##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC016852|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##NM_020524|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AF221521|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK023219|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303413|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303863|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK300987|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK022497|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK300544|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK310712|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK315551|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AF289598|PYGO2|90780|pygopus homolog 2 (Drosophila)##AF457208|PYGO2|90780|pygopus homolog 2 (Drosophila)##DQ893379|PYGO2|90780|pygopus homolog 2 (Drosophila)##DQ895952|PYGO2|90780|pygopus homolog 2 (Drosophila)##AK092389|PYGO2|90780|pygopus homolog 2 (Drosophila)##BC006132|PYGO2|90780|pygopus homolog 2 (Drosophila)##BC032099|PYGO2|90780|pygopus homolog 2 (Drosophila)	0.99609	CTCF.p2:1:0.996
chr13	33684082	33684201	reg1017620.p2	7.714	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-93618	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-523458	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-523502	+	AY082590 BC046563 NM_001243466 NM_178007	76074	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	96023	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	175726	-	AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.08741	
chr14	76568420	76568539	reg1018597.p2	7.714	+	TSC_hg19_v1_chr14_+_76452112 NM_001102564 NM_052873 AK302944 AK056735 BC032566 BC010436 BC042852 CU679711	-116387	+	NM_003239	-120388	-	AK313564 TSC_hg19_v1_chr14_-_76447479 X14149 J03241	-121008	-	TSC_hg19_v1_chr14_+_76618258 NM_017926 NM_017972 BC058032	49777	+	TSC_hg19_v1_chr14_+_76618279 AB032978	49798	+	AK000696 TSC_hg19_v1_chr14_+_76618289	49827	+	NM_001102564|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##NM_052873|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##AK302944|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##AK056735|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##BC010436|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##BC042852|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##NM_003239|TGFB3|7043|transforming growth factor, beta 3##AK313564|TGFB3|7043|transforming growth factor, beta 3##X14149|TGFB3|7043|transforming growth factor, beta 3##J03241|TGFB3|7043|transforming growth factor, beta 3##NM_017926|C14orf118|55668|chromosome 14 open reading frame 118##NM_017972|C14orf118|55668|chromosome 14 open reading frame 118##BC058032|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##AK000696|C14orf118|55668|chromosome 14 open reading frame 118	0.262641	CTCF.p2:-1:0.263
chr15	91768246	91768313	reg1026903.p1	7.714	+	TSC_hg19_v1_chr15_+_91643558 AF052188	-124720	+	TSC_hg19_v1_chr15_+_91643505 NM_014848 BC030011	-124793	+	NM_001167580 TSC_hg19_v1_chr15_+_91643185 AK294902	-125070	+	AB018278 TSC_hg19_v1_chr15_+_91769341 CR457086 DQ891614 EU176590	1132	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	628664	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	628818	+	AF052188|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_014848|SV2B|9899|synaptic vesicle glycoprotein 2B##BC030011|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B##AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B##AB018278|SV2B|9899|synaptic vesicle glycoprotein 2B##CR457086|SV2B|9899|synaptic vesicle glycoprotein 2B##DQ891614|SV2B|9899|synaptic vesicle glycoprotein 2B##EU176590|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	0.0	
chr16	84174903	84175083	reg1018388.p1	7.714	+	TSC_hg19_v1_chr16_+_84150646 BC052334	-24342	+	TSC_hg19_v1_chr16_-_84150449 BC026330 D42053 NM_003791	-24477	-	TSC_hg19_v1_chr16_-_84150441 AK291773 BC114555 BC114961 AK299067	-24581	-	TSC_hg19_v1_chr16_-_84178781 AK074878 AK299798 BC018084 NM_001146051 NM_031463	3767	-	NM_178452 TSC_hg19_v1_chr16_+_84178912 BX648657 AL833327 AL833328 AL833336 AK057238 AK310961 BC024009	3899	+	TSC_hg19_v1_chr16_-_84220644 AK304739 L39059 AB209594 AK299060 AK097031 AK299347 BC028131 AK304261 AK315982 NM_001243156 NM_001243157 NM_001243158 NM_001243159 NM_001243160 NM_005679 NM_139353	45631	-	BC052334|LOC729887|729887|uncharacterized LOC729887##BC026330|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##D42053|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##NM_003791|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##AK291773|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114555|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114961|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##AK299067|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##AK074878|HSDL1|83693|hydroxysteroid dehydrogenase like 1##AK299798|HSDL1|83693|hydroxysteroid dehydrogenase like 1##BC018084|HSDL1|83693|hydroxysteroid dehydrogenase like 1##NM_001146051|HSDL1|83693|hydroxysteroid dehydrogenase like 1##NM_031463|HSDL1|83693|hydroxysteroid dehydrogenase like 1##NM_178452|DNAAF1|123872|dynein, axonemal, assembly factor 1##BX648657|DNAAF1|123872|dynein, axonemal, assembly factor 1##AL833327|DNAAF1|123872|dynein, axonemal, assembly factor 1##AL833328|DNAAF1|123872|dynein, axonemal, assembly factor 1##AL833336|DNAAF1|123872|dynein, axonemal, assembly factor 1##AK057238|DNAAF1|123872|dynein, axonemal, assembly factor 1##AK310961|DNAAF1|123872|dynein, axonemal, assembly factor 1##BC024009|DNAAF1|123872|dynein, axonemal, assembly factor 1##AK304739|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##L39059|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AB209594|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK299060|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK097031|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK299347|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##BC028131|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK304261|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK315982|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243156|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243157|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243158|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243159|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243160|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_005679|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_139353|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa	0.0	
chrX	130880554	130880721	reg1015364.p1	7.714	+	BC137050 AB529233 NM_001004486	-202639	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-457225	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-457375	-	TSC_hg19_v1_chrX_-_130964633 AK097911	84014	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	276684	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	277003	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.101301	
chr4	105852390	105852499	reg1018261.p2	7.713	+	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	-436391	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	-439962	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-1211544	-	BX640738 NM_017628	214587	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	215367	+	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	215600	+	AK127778|CXXC4|80319|CXXC finger protein 4##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2	0.941693	CTCF.p2:-5:0.942
chr1	171157929	171158037	reg1017596.p2	7.712	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	-3561	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	-97942	+	NM_001163629 NM_025063 AK027203 BC113390 BC113392	-253336	+	AK290113 AK315100 M64082 NM_002021 AK296198	59678	+	BC002780 NM_002022 Z11737	125445	+	TSC_hg19_v1_chr1_+_171454689 BC066968 NM_015172 BC058930 BC026108 BC045713 BC001260 BC006090	296711	+	NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##NM_001163629|C1orf129|80133|chromosome 1 open reading frame 129##NM_025063|C1orf129|80133|chromosome 1 open reading frame 129##AK027203|C1orf129|80133|chromosome 1 open reading frame 129##BC113390|C1orf129|80133|chromosome 1 open reading frame 129##BC113392|C1orf129|80133|chromosome 1 open reading frame 129##AK290113|FMO1|2326|flavin containing monooxygenase 1##AK315100|FMO1|2326|flavin containing monooxygenase 1##M64082|FMO1|2326|flavin containing monooxygenase 1##NM_002021|FMO1|2326|flavin containing monooxygenase 1##AK296198|FMO1|2326|flavin containing monooxygenase 1##BC002780|FMO4|2329|flavin containing monooxygenase 4##NM_002022|FMO4|2329|flavin containing monooxygenase 4##Z11737|FMO4|2329|flavin containing monooxygenase 4##BC066968|PRRC2C|23215|proline-rich coiled-coil 2C##NM_015172|PRRC2C|23215|proline-rich coiled-coil 2C##BC058930|PRRC2C|23215|proline-rich coiled-coil 2C##BC026108|PRRC2C|23215|proline-rich coiled-coil 2C##BC045713|PRRC2C|23215|proline-rich coiled-coil 2C##BC001260|PRRC2C|23215|proline-rich coiled-coil 2C##BC006090|PRRC2C|23215|proline-rich coiled-coil 2C	0.987514	CTCF.p2:5:0.988
chr12	102563846	102563963	reg1018129.p1	7.712	+	NM_017915 AK302724 AK300041 BC070270 AF274940 BC030962 BC018903 AK303571 AK000648 BC014313	-49846	+	TSC_hg19_v1_chr12_-_102513850 AK296733 AK310619	-50026	-	AK026271 AF514994 BC000861 NM_024057	-51586	-	DQ892335 DQ895540 M57703 BC018048 NM_002674	27676	-	TSC_hg19_v1_chr12_-_102872329 M37484 NM_001111284	308474	-	AB384874 BC148266 CR541861 X56773 X56774 M29644 X00173 TSC_hg19_v1_chr12_-_102874271	310311	-	NM_017915|C12orf48|55010|chromosome 12 open reading frame 48##AK302724|C12orf48|55010|chromosome 12 open reading frame 48##AK300041|C12orf48|55010|chromosome 12 open reading frame 48##BC070270|C12orf48|55010|chromosome 12 open reading frame 48##AF274940|C12orf48|55010|chromosome 12 open reading frame 48##BC030962|C12orf48|55010|chromosome 12 open reading frame 48##BC018903|C12orf48|55010|chromosome 12 open reading frame 48##AK303571|C12orf48|55010|chromosome 12 open reading frame 48##AK000648|C12orf48|55010|chromosome 12 open reading frame 48##BC014313|C12orf48|55010|chromosome 12 open reading frame 48##AK296733|NUP37|79023|nucleoporin 37kDa##AK310619|NUP37|79023|nucleoporin 37kDa##AK026271|NUP37|79023|nucleoporin 37kDa##AF514994|NUP37|79023|nucleoporin 37kDa##BC000861|NUP37|79023|nucleoporin 37kDa##NM_024057|NUP37|79023|nucleoporin 37kDa##DQ892335|PMCH|5367|pro-melanin-concentrating hormone##DQ895540|PMCH|5367|pro-melanin-concentrating hormone##M57703|PMCH|5367|pro-melanin-concentrating hormone##BC018048|PMCH|5367|pro-melanin-concentrating hormone##NM_002674|PMCH|5367|pro-melanin-concentrating hormone##M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	0.923445	CTCF.p2:-16:0.923
chr13	86402363	86402510	reg1020160.p1	7.711	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-28997	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-1945936	-	TSC_hg19_v1_chr13_-_84456424 BC051738	-1946011	-	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	1922433	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	5648468	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	7476991	+	BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6	1.018503	CTCF.p2:-23:0.999
chr6	102562397	102562512	reg1020730.p1	7.711	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	-715549	+	BC037954 TSC_hg19_v1_chr6_+_101846686	-715777	+	HM149340 TSC_hg19_v1_chr6_+_101841583	-720948	+	TSC_hg19_v1_chr6_-_105307736 AK291760	2745271	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	2745308	-	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	2745334	-	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	0.552981	CTCF.p2:-10:0.553
chr8	14717792	14717886	reg1015927.p1	7.711	+	AK058131 NM_001007090 BC031245 AF394908 CU689130	-1293414	+	BC054511 AK291682 AK024773 AK225098 AB051510 BC049842 NM_024767 NM_182643	-1345534	-	TSC_hg19_v1_chr8_-_13134056 AK025544	-1583794	-	NM_139167	377952	-	NM_006765 NM_178234 BC010370 TSC_hg19_v1_chr8_+_15397731	679824	+	TSC_hg19_v1_chr8_+_15397771 U42349 BT020002 DQ892936 DQ896185	680011	+	AK058131|C8orf48|157773|chromosome 8 open reading frame 48##NM_001007090|C8orf48|157773|chromosome 8 open reading frame 48##BC031245|C8orf48|157773|chromosome 8 open reading frame 48##AF394908|C8orf48|157773|chromosome 8 open reading frame 48##BC054511|DLC1|10395|deleted in liver cancer 1##AK291682|DLC1|10395|deleted in liver cancer 1##AK024773|DLC1|10395|deleted in liver cancer 1##AK225098|DLC1|10395|deleted in liver cancer 1##AB051510|DLC1|10395|deleted in liver cancer 1##BC049842|DLC1|10395|deleted in liver cancer 1##NM_024767|DLC1|10395|deleted in liver cancer 1##NM_182643|DLC1|10395|deleted in liver cancer 1##AK025544|DLC1|10395|deleted in liver cancer 1##NM_139167|SGCZ|137868|sarcoglycan, zeta##NM_006765|TUSC3|7991|tumor suppressor candidate 3##NM_178234|TUSC3|7991|tumor suppressor candidate 3##BC010370|TUSC3|7991|tumor suppressor candidate 3##U42349|TUSC3|7991|tumor suppressor candidate 3##BT020002|TUSC3|7991|tumor suppressor candidate 3##DQ892936|TUSC3|7991|tumor suppressor candidate 3##DQ896185|TUSC3|7991|tumor suppressor candidate 3	0.748326	CTCF.p2:15:0.748
chr1	545350	545530	reg1007779.p3	7.710	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-177792	+	NM_001005484	-476350	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-516035	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	76602	-	TSC_hg19_v1_chr1_-_714015 BC006361	168577	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	217455	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	2.931006	CTCF.p2:7:0.977	CTCF.p2:-60:0.977	CTCF.p2:71:0.977
chr2	179171220	179171349	reg1020221.p1	7.710	+	TSC_hg19_v1_chr2_+_179059238 AB208898 NM_001201480 NM_001201481 NM_001201482 NM_032523 BC052259 AK300389 AF323728 AF392448	-112060	+	AF526533 BC037837 BC066549 NM_152945 TSC_hg19_v1_chr2_+_178977198 AK126575 AB036991 CU688160	-194073	+	AB038041 NM_001077197	-198219	-	AK093902 AX748360 NM_145739	13686	+	TSC_hg19_v1_chr2_+_179278403 BX538254	107120	+	AY251164 NM_001139518 TSC_hg19_v1_chr2_-_179315397 NM_001139517	144134	-	AB208898|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201480|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201481|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201482|OSBPL6|114880|oxysterol binding protein-like 6##NM_032523|OSBPL6|114880|oxysterol binding protein-like 6##BC052259|OSBPL6|114880|oxysterol binding protein-like 6##AK300389|OSBPL6|114880|oxysterol binding protein-like 6##AF323728|OSBPL6|114880|oxysterol binding protein-like 6##AF392448|OSBPL6|114880|oxysterol binding protein-like 6##AF526533|RBM45|129831|RNA binding motif protein 45##BC037837|RBM45|129831|RNA binding motif protein 45##BC066549|RBM45|129831|RNA binding motif protein 45##NM_152945|RBM45|129831|RNA binding motif protein 45##AK126575|RBM45|129831|RNA binding motif protein 45##AB036991|RBM45|129831|RNA binding motif protein 45##AB038041|PDE11A|50940|phosphodiesterase 11A##NM_001077197|PDE11A|50940|phosphodiesterase 11A##AK093902|OSBPL6|114880|oxysterol binding protein-like 6##NM_145739|OSBPL6|114880|oxysterol binding protein-like 6##AY251164|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_001139518|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_001139517|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator	0.16481	
chr3	19390573	19390725	reg1016393.p1	7.710	+	AK295633 AY053503 NM_144633 AB209053 AK309034	-200645	+	BC001744 NM_001131010	-910416	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	-923852	-	BC028198 AK097644 NM_144715	585039	-	TSC_hg19_v1_chr3_+_19988586 NM_004162	598040	+	TSC_hg19_v1_chr3_+_19988870 AK312618 BC018288 AK309287 AK295992 BC001267	598252	+	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC028198|EFHB|151651|EF-hand domain family, member B##AK097644|EFHB|151651|EF-hand domain family, member B##NM_144715|EFHB|151651|EF-hand domain family, member B##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family##AK312618|RAB5A|5868|RAB5A, member RAS oncogene family##BC018288|RAB5A|5868|RAB5A, member RAS oncogene family##AK309287|RAB5A|5868|RAB5A, member RAS oncogene family##AK295992|RAB5A|5868|RAB5A, member RAS oncogene family##BC001267|RAB5A|5868|RAB5A, member RAS oncogene family	0.994911	CTCF.p2:-28:0.995
chr11	64655472	64655603	reg1017654.p1	7.709	+	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	-8376	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	-9383	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	-9555	-	AB384474 TSC_hg19_v1_chr11_-_64684682 AB007864 AK126181 AK300925 AK307684 BC113090 BC113091 BC110650 NM_015104	29126	-	TSC_hg19_v1_chr11_+_64692186 NM_006244 AK092730 AX747693 BC045619	36601	+	BC093960 BC093962 BC101523 AF260739 NM_130769	47809	-	AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AY007161|EHD1|10938|EH-domain containing 1##AB007864|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##AK126181|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##AK300925|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##AK307684|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##BC113090|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##BC113091|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##BC110650|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##NM_015104|ATG2A|23130|ATG2 autophagy related 2 homolog A (S. cerevisiae)##NM_006244|PPP2R5B|5526|protein phosphatase 2, regulatory subunit B', beta##AK092730|PPP2R5B|5526|protein phosphatase 2, regulatory subunit B', beta##BC045619|PPP2R5B|5526|protein phosphatase 2, regulatory subunit B', beta##BC093960|GPHA2|170589|glycoprotein hormone alpha 2##BC093962|GPHA2|170589|glycoprotein hormone alpha 2##BC101523|GPHA2|170589|glycoprotein hormone alpha 2##AF260739|GPHA2|170589|glycoprotein hormone alpha 2##NM_130769|GPHA2|170589|glycoprotein hormone alpha 2	0.998663	CTCF.p2:-1:0.999
chr19	42257213	42257349	reg1018458.p1	7.709	+	M16234 TSC_hg19_v1_chr19_+_42221424	-35863	+	TSC_hg19_v1_chr19_+_42212619 CR749337 DQ890840 DQ896753 CU689928 M15042 X16455	-44645	+	TSC_hg19_v1_chr19_+_42212544 M29540 AK310844 BC034671 AK223101	-44730	+	NM_002483 TSC_hg19_v1_chr19_+_42259437 AK312542 M29541 M18728 M18216 BC005008 BT009774	2190	+	AK298694 NM_001815 D90277 D90278 L00692 L00693 BC106728	43271	+	AY358726 NM_173506	91226	-	M16234|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##CR749337|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ890840|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ896753|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M15042|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##X16455|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M29540|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK310844|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##BC034671|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK223101|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##NM_002483|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##AK312542|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M29541|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18728|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18216|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BC005008|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BT009774|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##NM_001815|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90277|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90278|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00692|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00693|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##BC106728|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##AY358726|LYPD4|147719|LY6/PLAUR domain containing 4##NM_173506|LYPD4|147719|LY6/PLAUR domain containing 4	0.994916	CTCF.p2:4:0.995
chr11	119598776	119598855	reg1022627.p1	7.708	+	BC037832 NM_006288	-304572	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-304906	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	-346416	-	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	567	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	400731	-	AK299472 TSC_hg19_v1_chr11_-_120008323	409457	-	BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29	0.0	
chr1	236260484	236260627	reg1013289.p1	7.708	+	TSC_hg19_v1_chr1_-_236228670 BC012501	-31815	-	TSC_hg19_v1_chr1_-_236228496 AK297234	-32057	-	TSC_hg19_v1_chr1_-_236228477 NM_002508	-32077	-	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	45321	+	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	184633	-	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	184761	-	BC012501|NID1|4811|nidogen 1##AK297234|NID1|4811|nidogen 1##NM_002508|NID1|4811|nidogen 1##BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)	0.0	
chr21	46558603	46558746	reg1017555.p2	7.708	+	TSC_hg19_v1_chr21_+_46494502 AY082339 BC030663 NM_001112 NM_001160230 NM_015833 NM_015834 AB194369 AB194370 AB194371 AB194372 AB194373 AF525422 AF533142 AY135659 U76420 U76421 U76422 BC065545 U82120	-64091	+	TSC_hg19_v1_chr21_+_46359968 CU679303	-198705	+	TSC_hg19_v1_chr21_+_46359920 AF391113 AF391114 BC009341 NM_058190	-198749	+	TSC_hg19_v1_chr21_+_46572480 FJ169506	13824	+	TSC_hg19_v1_chr21_-_46707808 BC064623 AJ575591 AL110285 AB023175 AJ302079 AJ302080 AY066015 AK294966 AK290732 AK298080 NM_015227 NM_133635	149127	-	TSC_hg19_v1_chr21_+_46707955 BC022830 BC033767	149301	+	AY082339|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC030663|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001112|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001160230|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015833|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015834|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194369|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194370|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194371|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194372|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194373|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF525422|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF533142|ADARB1|104|adenosine deaminase, RNA-specific, B1##AY135659|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76420|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76421|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76422|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC065545|ADARB1|104|adenosine deaminase, RNA-specific, B1##U82120|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF391113|FAM207A|85395|family with sequence similarity 207, member A##AF391114|FAM207A|85395|family with sequence similarity 207, member A##BC009341|FAM207A|85395|family with sequence similarity 207, member A##NM_058190|FAM207A|85395|family with sequence similarity 207, member A##FJ169506|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC064623|POFUT2|23275|protein O-fucosyltransferase 2##AJ575591|POFUT2|23275|protein O-fucosyltransferase 2##AL110285|POFUT2|23275|protein O-fucosyltransferase 2##AB023175|POFUT2|23275|protein O-fucosyltransferase 2##AJ302079|POFUT2|23275|protein O-fucosyltransferase 2##AJ302080|POFUT2|23275|protein O-fucosyltransferase 2##AY066015|POFUT2|23275|protein O-fucosyltransferase 2##AK294966|POFUT2|23275|protein O-fucosyltransferase 2##AK290732|POFUT2|23275|protein O-fucosyltransferase 2##AK298080|POFUT2|23275|protein O-fucosyltransferase 2##NM_015227|POFUT2|23275|protein O-fucosyltransferase 2##NM_133635|POFUT2|23275|protein O-fucosyltransferase 2##BC022830|LOC642852|642852|uncharacterized LOC642852##BC033767|LOC642852|642852|uncharacterized LOC642852	0.977658	CTCF.p2:5:0.978
chr5	38667281	38667383	reg1015212.p1	7.708	+	AK308158 AK309882 NM_002310	-71826	-	TSC_hg19_v1_chr5_-_38556749 AK290059 NM_001127671	-110604	-	NM_182801 BC033177 AK092994 AX747843 BC033188	-221708	+	NM_001168355 TSC_hg19_v1_chr5_+_38845959	178627	+	TSC_hg19_v1_chr5_+_38846113 NM_003999 BC010943 U60805 AK304016 BC063468	178742	+	TSC_hg19_v1_chr5_+_38846260 BC125209 BC125210	178963	+	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha##AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha##AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_182801|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033177|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK092994|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033188|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_001168355|OSMR|9180|oncostatin M receptor##NM_003999|OSMR|9180|oncostatin M receptor##BC010943|OSMR|9180|oncostatin M receptor##U60805|OSMR|9180|oncostatin M receptor##AK304016|OSMR|9180|oncostatin M receptor##BC063468|OSMR|9180|oncostatin M receptor##BC125209|OSMR|9180|oncostatin M receptor##BC125210|OSMR|9180|oncostatin M receptor	0.990021	CTCF.p2:-14:0.990
chr6	41424189	41424298	reg1017898.p2	7.708	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-120677	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-169819	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-228175	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	89916	+	TSC_hg19_v1_chr6_+_41514342 BC052803	90094	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	181979	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	0.010884	
chr11	30939558	30939652	reg1013995.p1	7.707	+	TSC_hg19_v1_chr11_-_30607762 AB209163 AK314833 NM_001145399	-331760	-	TSC_hg19_v1_chr11_-_30605748 AK309809	-333857	-	CU689190 NM_001584 U57911	-337626	-	BX647348 NM_020869	74627	-	AY247970 AK126066 NM_181807	451733	-	TSC_hg19_v1_chr11_+_31391404 NM_181706 AK123087 AL833128 AK289665 BC036571 BC044931 BC063804	451797	+	AB209163|MPPED2|744|metallophosphoesterase domain containing 2##AK314833|MPPED2|744|metallophosphoesterase domain containing 2##NM_001145399|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2##NM_001584|MPPED2|744|metallophosphoesterase domain containing 2##U57911|MPPED2|744|metallophosphoesterase domain containing 2##BX647348|DCDC5|100506627|doublecortin domain containing 5##NM_020869|DCDC5|100506627|doublecortin domain containing 5##AY247970|DCDC1|341019|doublecortin domain containing 1##NM_181807|DCDC1|341019|doublecortin domain containing 1##NM_181706|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK123087|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AL833128|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK289665|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC036571|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC044931|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC063804|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24	0.976932	CTCF.p2:9:0.977
chr4	40910827	40910953	reg1017727.p1	7.707	+	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-51715	-	BC042401 NM_024677 BC036568 AK024063	-158944	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-278183	-	BC088372 TSC_hg19_v1_chr4_-_40936716	25788	-	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	305679	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	348006	+	AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK304206|RBM47|54502|RNA binding motif protein 47##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.999771	CTCF.p2:-10:1.000
chr10	122584471	122584580	reg1016842.p2	7.706	+	NM_001030059 TSC_hg19_v1_chr10_+_122216486 BC101267 BC101268 BC101269 BC122535 BC132787 AK296273 HQ258170 AK310178	-367886	+	NM_007190 TSC_hg19_v1_chr10_+_121652241 AB019435 AK021846 AK314592 AK001135 AK001135 AK301517 BC063800 BC063800 BC002540 AF116723 BX649119 BX649119 AB384691 CU687818 BT006755	-932336	+	AK023143 TSC_hg19_v1_chr10_-_121632359 BC004183 BC007219 NM_024834	-952185	-	NM_018117 TSC_hg19_v1_chr10_+_122610771	26203	+	TSC_hg19_v1_chr10_+_122610873 BC040469 AB037772 AK299524 AF320223 AK301761 BC071564 AK315145 AB385454	26370	+	AB084153 EF057068 EU826598 EU826599 EU826600 EU826601 AB587574 M55614 Z71929 X56191 NM_001144913 NM_001144914	768880	-	NM_001030059|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101267|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101268|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101269|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC122535|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC132787|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##HQ258170|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AK310178|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##NM_007190|SEC23IP|11196|SEC23 interacting protein##AB019435|SEC23IP|11196|SEC23 interacting protein##AK021846|SEC23IP|11196|SEC23 interacting protein##AK314592|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK301517|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC002540|SEC23IP|11196|SEC23 interacting protein##AF116723|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BT006755|SEC23IP|11196|SEC23 interacting protein##AK023143|MCMBP|79892|minichromosome maintenance complex binding protein##BC004183|MCMBP|79892|minichromosome maintenance complex binding protein##BC007219|MCMBP|79892|minichromosome maintenance complex binding protein##NM_024834|MCMBP|79892|minichromosome maintenance complex binding protein##NM_018117|WDR11|55717|WD repeat domain 11##BC040469|WDR11|55717|WD repeat domain 11##AB037772|WDR11|55717|WD repeat domain 11##AK299524|WDR11|55717|WD repeat domain 11##AF320223|WDR11|55717|WD repeat domain 11##AK301761|WDR11|55717|WD repeat domain 11##BC071564|WDR11|55717|WD repeat domain 11##AK315145|WDR11|55717|WD repeat domain 11##AB084153|FGFR2|2263|fibroblast growth factor receptor 2##EF057068|FGFR2|2263|fibroblast growth factor receptor 2##EU826598|FGFR2|2263|fibroblast growth factor receptor 2##EU826599|FGFR2|2263|fibroblast growth factor receptor 2##EU826600|FGFR2|2263|fibroblast growth factor receptor 2##EU826601|FGFR2|2263|fibroblast growth factor receptor 2##M55614|FGFR2|2263|fibroblast growth factor receptor 2##Z71929|FGFR2|2263|fibroblast growth factor receptor 2##X56191|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144913|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144914|FGFR2|2263|fibroblast growth factor receptor 2	0.914	CTCF.p2:-21:0.914
chr1	23543307	23543466	reg1018924.p1	7.706	+	BC007720 NM_000864	-22165	-	TSC_hg19_v1_chr1_-_23504281 AK093016 AX747858	-39100	-	TSC_hg19_v1_chr1_-_23495350 NM_001142546 NM_033631	-48036	-	TSC_hg19_v1_chr1_-_23670794 BX647784 AF000364 AK297405 AK311519 AK297382 BC110389 AK300029 BX640912 BC001449 AK313142 NM_001102397 NM_001102398 NM_001102399 NM_005826	127432	-	CU691148 EU446536 TSC_hg19_v1_chr1_-_23694804 AK308173 BC056400 AK092364 AX747503 AL834485 NM_030634	151312	-	TSC_hg19_v1_chr1_+_23695456 BC054115 BC068594 AK074989	152109	+	BC007720|HTR1D|3352|5-hydroxytryptamine (serotonin) receptor 1D##NM_000864|HTR1D|3352|5-hydroxytryptamine (serotonin) receptor 1D##AK093016|LUZP1|7798|leucine zipper protein 1##NM_001142546|LUZP1|7798|leucine zipper protein 1##NM_033631|LUZP1|7798|leucine zipper protein 1##BX647784|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##AF000364|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##AK297405|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##AK311519|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##AK297382|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##BC110389|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##AK300029|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##BX640912|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##BC001449|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##AK313142|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##NM_001102397|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##NM_001102398|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##NM_001102399|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##NM_005826|HNRNPR|10236|heterogeneous nuclear ribonucleoprotein R##EU446536|ZNF436|80818|zinc finger protein 436##AK308173|ZNF436|80818|zinc finger protein 436##BC056400|ZNF436|80818|zinc finger protein 436##AK092364|ZNF436|80818|zinc finger protein 436##AL834485|ZNF436|80818|zinc finger protein 436##NM_030634|ZNF436|80818|zinc finger protein 436##BC054115|C1orf213|148898|chromosome 1 open reading frame 213##BC068594|C1orf213|148898|chromosome 1 open reading frame 213##AK074989|C1orf213|148898|chromosome 1 open reading frame 213	0.99989	CTCF.p2:20:1.000
chr7	140175687	140175791	reg1016892.p1	7.706	+	NM_001008749	-71897	+	AL136583 AL136583 TSC_hg19_v1_chr7_-_140098295 AK299276 BC028380 BC028380 BC046567 BC046567 AK296543 AK300265 AK074823 AK074823 NM_032295 NM_207113	-77440	-	TSC_hg19_v1_chr7_+_139877154 AK026372	-298583	+	TSC_hg19_v1_chr7_-_140179165 AB209298 AB527778 DQ892404 EU176516 BC064838 AM236048 BC037400 BC051821 BC012398 AK297361 AK315552	3423	-	TSC_hg19_v1_chr7_-_140179306 AF192784 AL136812 AF117233 BC025955	3531	-	TSC_hg19_v1_chr7_-_140179348 NM_001145125 NM_013446	3611	-	NM_001008749|RAB19|401409|RAB19, member RAS oncogene family##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK299276|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK296543|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK300265|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_032295|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_207113|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK026372|LOC100134229|100134229|uncharacterized LOC100134229##AB209298|MKRN1|23608|makorin ring finger protein 1##DQ892404|MKRN1|23608|makorin ring finger protein 1##EU176516|MKRN1|23608|makorin ring finger protein 1##BC064838|MKRN1|23608|makorin ring finger protein 1##AM236048|MKRN1|23608|makorin ring finger protein 1##BC037400|MKRN1|23608|makorin ring finger protein 1##BC051821|MKRN1|23608|makorin ring finger protein 1##BC012398|MKRN1|23608|makorin ring finger protein 1##AK297361|MKRN1|23608|makorin ring finger protein 1##AK315552|MKRN1|23608|makorin ring finger protein 1##AF192784|MKRN1|23608|makorin ring finger protein 1##AL136812|MKRN1|23608|makorin ring finger protein 1##AF117233|MKRN1|23608|makorin ring finger protein 1##BC025955|MKRN1|23608|makorin ring finger protein 1##NM_001145125|MKRN1|23608|makorin ring finger protein 1##NM_013446|MKRN1|23608|makorin ring finger protein 1	0.182978	
chr16	71679497	71679606	reg1017271.p1	7.705	+	BC005052 NM_001017967 NM_052858 AK307585 BC011893 BC013376 AK056842 AK292185 CU680584	-19454	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	-68579	-	NM_005769 AF131235 NM_001166395 AK026635 AK074746	-119458	+	AB463166 AM393067 AM393542 BC129927 BC129983 NM_015020	69149	-	TSC_hg19_v1_chr16_-_71757789 AK124678	78213	-	AL110198 TSC_hg19_v1_chr16_-_71782208	102638	-	BC005052|MARVELD3|91862|MARVEL domain containing 3##NM_001017967|MARVELD3|91862|MARVEL domain containing 3##NM_052858|MARVELD3|91862|MARVEL domain containing 3##AK307585|MARVELD3|91862|MARVEL domain containing 3##BC011893|MARVELD3|91862|MARVEL domain containing 3##BC013376|MARVELD3|91862|MARVEL domain containing 3##AK056842|MARVELD3|91862|MARVEL domain containing 3##AK292185|MARVELD3|91862|MARVEL domain containing 3##X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase##NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AM393067|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AM393542|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129927|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129983|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##NM_015020|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AK124678|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AL110198|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit	0.852011	CTCF.p2:0:0.852
chr20	2367974	2368116	reg1019380.p2	7.705	+	AF540969 AF540970 NM_198994	-6492	+	NM_003245 AK298637 AK299447 AK308249 AK290324 AK291351 AK315236 L10386 BC109075 BC109076	-91396	+	TSC_hg19_v1_chr20_-_2083527 BC034792	-284519	-	TSC_hg19_v1_chr20_-_2451416 X17568 X17567 BC080516	83345	-	TSC_hg19_v1_chr20_-_2451436 AK301034 AK312620 AK301206 AK307093 AK307266	83387	-	TSC_hg19_v1_chr20_-_2451439 BC003530 J04564 NM_003091 NM_198216	83428	-	AF540969|TGM6|343641|transglutaminase 6##AF540970|TGM6|343641|transglutaminase 6##NM_198994|TGM6|343641|transglutaminase 6##NM_003245|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK298637|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK299447|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK308249|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK290324|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291351|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK315236|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##L10386|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109075|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109076|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##X17568|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##X17567|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##BC080516|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK301034|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK312620|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK301206|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK307093|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##BC003530|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##J04564|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##NM_003091|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##NM_198216|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1	0.129265	
chrX	118918960	118919072	reg1017869.p1	7.704	+	TSC_hg19_v1_chrX_+_118892553 NM_001105576	-26435	+	AY034177 AF403058 AF403059 AF403060 AF403061 AF403062 AY679521 NM_015129 NM_145799 NM_145800 NM_145802 TSC_hg19_v1_chrX_-_118827360 AK290977	-91665	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	-91837	-	U57846 AK098280 BC001019 D79205 TSC_hg19_v1_chrX_-_118925592 BC070205 D28397 NM_001000	6568	-	TSC_hg19_v1_chrX_-_118986969 AF318576 AK093728 AX748280 BC121017 BC121018 AY013251 BC008494 NM_023010 NM_080632	67935	-	AB464688 BT007175 CU676558 BC000832 TSC_hg19_v1_chrX_-_119005683 BC128440 BC020556 AK314778 X98253 NM_006978	86666	-	NM_001105576|ANKRD58|347454|ankyrin repeat domain 58##AY034177|SEPT6|23157|septin 6##AF403058|SEPT6|23157|septin 6##AF403059|SEPT6|23157|septin 6##AF403060|SEPT6|23157|septin 6##AF403061|SEPT6|23157|septin 6##AF403062|SEPT6|23157|septin 6##AY679521|SEPT6|23157|septin 6##NM_015129|SEPT6|23157|septin 6##NM_145799|SEPT6|23157|septin 6##NM_145800|SEPT6|23157|septin 6##NM_145802|SEPT6|23157|septin 6##AK290977|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6##U57846|RPL39|6170|ribosomal protein L39##BC001019|RPL39|6170|ribosomal protein L39##D79205|RPL39|6170|ribosomal protein L39##BC070205|RPL39|6170|ribosomal protein L39##D28397|RPL39|6170|ribosomal protein L39##NM_001000|RPL39|6170|ribosomal protein L39##AF318576|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##AK093728|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC121017|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC121018|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##AY013251|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC008494|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##NM_023010|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##NM_080632|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BT007175|RNF113A|7737|ring finger protein 113A##BC000832|RNF113A|7737|ring finger protein 113A##BC020556|RNF113A|7737|ring finger protein 113A##AK314778|RNF113A|7737|ring finger protein 113A##X98253|RNF113A|7737|ring finger protein 113A##NM_006978|RNF113A|7737|ring finger protein 113A	0.0	
chrX	81473937	81474047	reg1016105.p2	7.704	+	TSC_hg19_v1_chrX_+_80457600 BC016709 AL136718 AK129610 AF042081 AK310011 AB590910 CR533478	-1016344	+	TSC_hg19_v1_chrX_+_80457572 AK309351	-1016416	+	AK094058 AX748432 NM_030763	-1016552	-	AK314967 NM_000307 TSC_hg19_v1_chrX_+_82763302 X82324 AB464667	1289307	+	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	1642179	+	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	1968980	-	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5##AK314967|POU3F4|5456|POU class 3 homeobox 4##NM_000307|POU3F4|5456|POU class 3 homeobox 4##X82324|POU3F4|5456|POU class 3 homeobox 4##BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	0.891291	CTCF.p2:-29:0.891
chr4	88894874	88894989	reg1016774.p2	7.703	+	AK307774 NM_001184695 NM_001184696 NM_001184697 NM_020203 AJ276396 BC128158 AF325916	-140802	+	AK075076 NM_001184694	-152376	+	NM_004967 TSC_hg19_v1_chr4_+_88720705 J05213	-174210	+	NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 TSC_hg19_v1_chr4_+_88896809 JF412667 BC093033	1879	+	TSC_hg19_v1_chr4_+_88896865 BX648003 J04765 AK057738 AK075463 AK290090 AK296035 BC007016 BC017387 BC022844 AK295491	1921	+	TSC_hg19_v1_chr4_+_88896868 AK290104 M83248 AK315461 AF052124	1948	+	AK307774|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184695|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184696|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184697|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_020203|MEPE|56955|matrix extracellular phosphoglycoprotein##AJ276396|MEPE|56955|matrix extracellular phosphoglycoprotein##BC128158|MEPE|56955|matrix extracellular phosphoglycoprotein##AF325916|MEPE|56955|matrix extracellular phosphoglycoprotein##AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_004967|IBSP|3381|integrin-binding sialoprotein##J05213|IBSP|3381|integrin-binding sialoprotein##NM_000582|SPP1|6696|secreted phosphoprotein 1##NM_001040058|SPP1|6696|secreted phosphoprotein 1##NM_001040060|SPP1|6696|secreted phosphoprotein 1##NM_001251829|SPP1|6696|secreted phosphoprotein 1##NM_001251830|SPP1|6696|secreted phosphoprotein 1##JF412667|SPP1|6696|secreted phosphoprotein 1##BC093033|SPP1|6696|secreted phosphoprotein 1##BX648003|SPP1|6696|secreted phosphoprotein 1##J04765|SPP1|6696|secreted phosphoprotein 1##AK057738|SPP1|6696|secreted phosphoprotein 1##AK075463|SPP1|6696|secreted phosphoprotein 1##AK290090|SPP1|6696|secreted phosphoprotein 1##AK296035|SPP1|6696|secreted phosphoprotein 1##BC007016|SPP1|6696|secreted phosphoprotein 1##BC017387|SPP1|6696|secreted phosphoprotein 1##BC022844|SPP1|6696|secreted phosphoprotein 1##AK295491|SPP1|6696|secreted phosphoprotein 1##AK290104|SPP1|6696|secreted phosphoprotein 1##M83248|SPP1|6696|secreted phosphoprotein 1##AK315461|SPP1|6696|secreted phosphoprotein 1##AF052124|SPP1|6696|secreted phosphoprotein 1	0.39884	CTCF.p2:0:0.399
chr1	93088878	93089010	reg1019705.p1	7.702	+	U67369 NM_005263 TSC_hg19_v1_chr1_-_92952458	-136494	-	BC032751 TSC_hg19_v1_chr1_-_92951630 NM_001127216	-137329	-	TSC_hg19_v1_chr1_-_92949508 AK123009	-139412	-	AB449875 AB587441 AF008915 AF042345 NM_005665	169011	-	TSC_hg19_v1_chr1_+_93297596 NM_000969 AK092963 AK095815 AK314720 AB055762	208620	+	TSC_hg19_v1_chr1_+_93297612 BC109370	208661	+	U67369|GFI1|2672|growth factor independent 1 transcription repressor##NM_005263|GFI1|2672|growth factor independent 1 transcription repressor##BC032751|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127216|GFI1|2672|growth factor independent 1 transcription repressor##AK123009|GFI1|2672|growth factor independent 1 transcription repressor##AB449875|EVI5|7813|ecotropic viral integration site 5##AF008915|EVI5|7813|ecotropic viral integration site 5##NM_005665|EVI5|7813|ecotropic viral integration site 5##NM_000969|RPL5|6125|ribosomal protein L5##AK092963|RPL5|6125|ribosomal protein L5##AK095815|RPL5|6125|ribosomal protein L5##AK314720|RPL5|6125|ribosomal protein L5##AB055762|RPL5|6125|ribosomal protein L5##BC109370|RPL5|6125|ribosomal protein L5	0.355072	CTCF.p2:3:0.355
chrX	1257821	1257946	reg1019177.p1	7.702	+	NM_000451 NM_006883 U89331	-672805	+	AK293506 NM_013239	-910194	-	NM_018390 BC064136 BC005028 BC000888 BC032072	-1059776	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	73701	-	NM_001161529 NM_001161531 NM_001161532 NM_006140 NM_172245 NM_172246 NM_172249 AK293086 AK301395 BC071835 M64445 BC002635 AL833597 AK309630 L29348 L29349 U93096 X17648	129831	+	NM_001161530 NM_172247 M73832 DQ893104 DQ896376 AB590144 CU687176 DQ841258 X54935	143700	+	NM_000451|SHOX|6473|short stature homeobox##NM_006883|SHOX|6473|short stature homeobox##U89331|SHOX|6473|short stature homeobox##AK293506|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_013239|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_018390|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC064136|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC005028|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC000888|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC032072|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2##NM_001161529|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161531|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161532|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_006140|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172245|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172246|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172249|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK293086|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK301395|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC071835|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M64445|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC002635|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AL833597|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK309630|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29348|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29349|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##U93096|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X17648|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161530|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172247|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M73832|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ893104|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ896376|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ841258|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X54935|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)	0.973812	CTCF.p2:-14:0.974
chrX	3556472	3556599	reg1014308.p1	7.702	+	BC011846 BC064986 BC080586 NM_015419 TSC_hg19_v1_chrX_-_3264691	-291848	-	NM_004042 X97868	-571679	+	BC022389 NM_001201539	-597024	+	EU832357 EU832442 TSC_hg19_v1_chrX_-_3631397	74832	-	TSC_hg19_v1_chrX_-_3631619 BC041073	75007	-	TSC_hg19_v1_chrX_-_3631645 X85545	75110	-	BC011846|MXRA5|25878|matrix-remodelling associated 5##BC064986|MXRA5|25878|matrix-remodelling associated 5##BC080586|MXRA5|25878|matrix-remodelling associated 5##NM_015419|MXRA5|25878|matrix-remodelling associated 5##NM_004042|ARSF|416|arylsulfatase F##X97868|ARSF|416|arylsulfatase F##BC022389|ARSF|416|arylsulfatase F##NM_001201539|ARSF|416|arylsulfatase F##EU832357|PRKX|5613|protein kinase, X-linked##EU832442|PRKX|5613|protein kinase, X-linked##BC041073|PRKX|5613|protein kinase, X-linked##X85545|PRKX|5613|protein kinase, X-linked	0.752939	CTCF.p2:-26:0.753
chr11	62232208	62232362	reg1017447.p1	7.701	+	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	-45749	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	-127337	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	-127460	+	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	81951	-	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	82029	-	DQ185040 BT006677 CR407625 BC006509 BC006520 CU674184 CU677463 CU680700 BC000384 DQ891103 DQ894284 Z11531 AB527934 BC009865 BC015813 BC018857 BC018853 BC028179 TSC_hg19_v1_chr11_-_62341334 BC013918 AK092787 AK299876 AY542307 BC067738 AK129569 AK129618 AK300729 X63526 AK130026 AK300686 BC031012	109039	-	AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein##DQ185040|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BT006677|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##CR407625|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006509|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006520|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC000384|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ891103|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ894284|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##Z11531|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC009865|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC015813|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018857|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018853|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC028179|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC013918|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK092787|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK299876|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AY542307|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC067738|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129569|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129618|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300729|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##X63526|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK130026|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300686|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC031012|EEF1G|1937|eukaryotic translation elongation factor 1 gamma	0.0	
chr17_ctg5_hap1	1330330	1330442	reg1019555.p1	7.701	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.538436	CTCF.p2:7:0.538
chr9	115582264	115582389	reg1017990.p1	7.701	+	TSC_hg19_v1_chr9_+_115513056 NM_001012994	-69235	+	TSC_hg19_v1_chr9_-_115480398 BC065210 AK310007 BC014881 NM_021218 AK000637	-101938	-	AF161411 TSC_hg19_v1_chr9_-_115480339 AF161409	-101988	-	TSC_hg19_v1_chr9_+_115631819 AK129991	49539	+	CU690566 BC048285 AK314414 AK055571 AF242557 NM_033051	70750	-	AK095843 NM_001101338	192145	-	NM_001012994|SNX30|401548|sorting nexin family member 30##BC065210|C9orf80|58493|chromosome 9 open reading frame 80##AK310007|C9orf80|58493|chromosome 9 open reading frame 80##BC014881|C9orf80|58493|chromosome 9 open reading frame 80##NM_021218|C9orf80|58493|chromosome 9 open reading frame 80##AK000637|C9orf80|58493|chromosome 9 open reading frame 80##AF161411|C9orf80|58493|chromosome 9 open reading frame 80##AF161409|C9orf80|58493|chromosome 9 open reading frame 80##AK129991|SNX30|401548|sorting nexin family member 30##BC048285|SLC46A2|57864|solute carrier family 46, member 2##AK314414|SLC46A2|57864|solute carrier family 46, member 2##AK055571|SLC46A2|57864|solute carrier family 46, member 2##AF242557|SLC46A2|57864|solute carrier family 46, member 2##NM_033051|SLC46A2|57864|solute carrier family 46, member 2##AK095843|ZNF883|169834|zinc finger protein 883##NM_001101338|ZNF883|169834|zinc finger protein 883	0.963537	CTCF.p2:23:0.964
chr9	88861897	88862034	reg1018057.p2	7.701	+	TSC_hg19_v1_chr9_-_88715117 AK075557 AK092943 AX747818 NM_177937	-146881	-	TSC_hg19_v1_chr9_-_88714486 NM_016548	-147459	-	TSC_hg19_v1_chr9_-_88714474 AK027717	-147494	-	NM_001010907 BC108665	12568	-	TSC_hg19_v1_chr9_+_88897112 AK025086	35148	+	AB528754 AM393721 TSC_hg19_v1_chr9_-_88897454 BC053900 BC071621 AY015642 AL834356 AF284752 BC002675 AK055643 AK225937 AK309289 NM_030940	35479	-	AK075557|GOLM1|51280|golgi membrane protein 1##AK092943|GOLM1|51280|golgi membrane protein 1##NM_177937|GOLM1|51280|golgi membrane protein 1##NM_016548|GOLM1|51280|golgi membrane protein 1##AK027717|GOLM1|51280|golgi membrane protein 1##NM_001010907|C9orf153|389766|chromosome 9 open reading frame 153##BC108665|C9orf153|389766|chromosome 9 open reading frame 153##BC053900|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC071621|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AY015642|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AL834356|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AF284752|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC002675|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK055643|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK225937|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##NM_030940|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)	0.0	
chrX	100461605	100461713	reg1015048.p2	7.701	+	TSC_hg19_v1_chrX_-_100446278 DQ145510	-15308	-	NM_006733 X97249	-106862	+	TSC_hg19_v1_chrX_+_100353189 AK302986	-108485	+	NM_001171184 NM_001939 AB209305 BC036095 U43519 AK289825 AK295843 BC111695	13354	+	AF285595 NM_001168474	84664	-	BC043391 AK308261 NM_024885	86392	-	DQ145510|YWHAQP8|392510|YWHAQ pseudogene 8##NM_006733|CENPI|2491|centromere protein I##X97249|CENPI|2491|centromere protein I##AK302986|CENPI|2491|centromere protein I##NM_001171184|DRP2|1821|dystrophin related protein 2##NM_001939|DRP2|1821|dystrophin related protein 2##AB209305|DRP2|1821|dystrophin related protein 2##BC036095|DRP2|1821|dystrophin related protein 2##U43519|DRP2|1821|dystrophin related protein 2##AK289825|DRP2|1821|dystrophin related protein 2##AK295843|DRP2|1821|dystrophin related protein 2##BC111695|DRP2|1821|dystrophin related protein 2##AF285595|TAF7L|54457|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa##NM_001168474|TAF7L|54457|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa##BC043391|TAF7L|54457|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa##AK308261|TAF7L|54457|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa##NM_024885|TAF7L|54457|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa	0.051414	
chrX	152665670	152665779	reg1018253.p2	7.701	+	TSC_hg19_v1_chrX_+_152599610 AK122976 NM_001080485	-66115	+	AY148486 EU161102 BC017555 AK314979 NM_004988	-179630	-	NM_032882 NM_001242319	-419711	-	NM_001136273	18056	+	NM_080701	46220	-	CU675933 TSC_hg19_v1_chrX_-_152736028 AF267739 AK302066 AK300650 AF319570 AF319571 AF319572 AF319573 AB464338 AM393157 DQ891762 DQ894946 BC008141	70327	-	AK122976|ZNF275|10838|zinc finger protein 275##NM_001080485|ZNF275|10838|zinc finger protein 275##AY148486|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##EU161102|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##BC017555|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##AK314979|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##NM_004988|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##NM_032882|PNMA6A|84968|paraneoplastic antigen like 6A##NM_001242319|PNMA6D|100287466|paraneoplastic antigen like 6D##NM_001136273|ZFP92|139735|zinc finger protein 92 homolog (mouse)##NM_080701|TREX2|11219|three prime repair exonuclease 2##AF267739|HAUS7|55559|HAUS augmin-like complex, subunit 7##AK302066|HAUS7|55559|HAUS augmin-like complex, subunit 7##AK300650|HAUS7|55559|HAUS augmin-like complex, subunit 7##AM393157|HAUS7|55559|HAUS augmin-like complex, subunit 7##DQ891762|TREX2|11219|three prime repair exonuclease 2##DQ894946|HAUS7|55559|HAUS augmin-like complex, subunit 7##BC008141|HAUS7|55559|HAUS augmin-like complex, subunit 7	0.996351	CTCF.p2:26:0.996
chr4	90080184	90080306	reg1017206.p2	7.700	+	AK027653 NM_145715	-46278	+	AK091881 AX747234 TSC_hg19_v1_chr4_-_90032571	-47686	-	CU687656 BC063126 BC041029 BC053569 BX647410 NM_014883	-102026	-	AK124616 TSC_hg19_v1_chr4_-_90228950	148706	-	TSC_hg19_v1_chr4_-_90229171 NM_198281	148912	-	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	677997	-	AK027653|TIGD2|166815|tigger transposable element derived 2##NM_145715|TIGD2|166815|tigger transposable element derived 2##AK091881|FAM13A|10144|family with sequence similarity 13, member A##BC063126|FAM13A|10144|family with sequence similarity 13, member A##BC041029|FAM13A|10144|family with sequence similarity 13, member A##BC053569|FAM13A|10144|family with sequence similarity 13, member A##BX647410|FAM13A|10144|family with sequence similarity 13, member A##NM_014883|FAM13A|10144|family with sequence similarity 13, member A##AK124616|GPRIN3|285513|GPRIN family member 3##NM_198281|GPRIN3|285513|GPRIN family member 3##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)	0.990019	CTCF.p2:-2:0.990
chr8	107775403	107775557	reg1017709.p2	7.700	+	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	-37125	+	TSC_hg19_v1_chr8_+_107670114 AK292899 BC032710 BC019691	-105365	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	-105492	+	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	6964	-	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	734708	-	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	1320394	-	AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AK292899|OXR1|55074|oxidation resistance 1##BC032710|OXR1|55074|oxidation resistance 1##BC019691|OXR1|55074|oxidation resistance 1##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1##AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2	0.908472	CTCF.p2:-14:0.908
chr1	104805908	104806027	reg1018861.p2	7.699	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-513465	+	NM_001008221 AK292341	-513689	+	AK292341 NM_001008221	-566896	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	2793398	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	2876775	+	AB023193 TSC_hg19_v1_chr1_+_107683657	2877637	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.830069	CTCF.p2:2:0.830
chr1	35147213	35147319	reg1017390.p2	7.699	+	NM_001134734	-504714	+	AK123355 NM_032884 BC007637	-514667	+	AY210418 NM_052896	-515824	-	AK129509 BC004379 NM_005268	73417	+	AK057628 NM_153212	78075	+	AK026139 NM_024009 TSC_hg19_v1_chr1_+_35246807	99540	+	NM_001134734|C1orf94|84970|chromosome 1 open reading frame 94##AK123355|C1orf94|84970|chromosome 1 open reading frame 94##NM_032884|C1orf94|84970|chromosome 1 open reading frame 94##BC007637|C1orf94|84970|chromosome 1 open reading frame 94##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2##AK129509|GJB5|2709|gap junction protein, beta 5, 31.1kDa##BC004379|GJB5|2709|gap junction protein, beta 5, 31.1kDa##NM_005268|GJB5|2709|gap junction protein, beta 5, 31.1kDa##AK057628|GJB4|127534|gap junction protein, beta 4, 30.3kDa##NM_153212|GJB4|127534|gap junction protein, beta 4, 30.3kDa##AK026139|GJB3|2707|gap junction protein, beta 3, 31kDa##NM_024009|GJB3|2707|gap junction protein, beta 3, 31kDa	0.109293	
chr3	143692047	143692147	reg1013295.p1	7.699	+	TSC_hg19_v1_chr3_+_143690915 BC037293	-1107	+	NM_173552 AK315082	-1445	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	-124830	-	NM_001134470 AK294020	120	+	AB527423 U84573 AK295084 TSC_hg19_v1_chr3_-_145878818	2186710	-	TSC_hg19_v1_chr3_-_145878972 BC037169 AB209879	2186859	-	BC037293|C3orf58|205428|chromosome 3 open reading frame 58##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58##AK294020|C3orf58|205428|chromosome 3 open reading frame 58##U84573|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AK295084|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##BC037169|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AB209879|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2	0.0	
chr5	137746831	137746936	reg1017916.p1	7.699	+	TSC_hg19_v1_chr5_+_137688386 BC146788 AB029005 AB527166	-58448	+	TSC_hg19_v1_chr5_+_137688270 AF338242 NM_016604	-58603	+	TSC_hg19_v1_chr5_+_137673956 BC000259 AF251040	-72900	+	TSC_hg19_v1_chr5_+_137774760 AK056193 AK291101 AK223611 BC006218 NM_016606 AK293480 AK290547	27845	+	AY562240 TSC_hg19_v1_chr5_+_137774899 AF251041	28023	+	TSC_hg19_v1_chr5_+_137801167 AK298101 AK301065	54288	+	BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B##AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B##AF338242|KDM3B|51780|lysine (K)-specific demethylase 3B##NM_016604|KDM3B|51780|lysine (K)-specific demethylase 3B##BC000259|FAM53C|51307|family with sequence similarity 53, member C##AF251040|FAM53C|51307|family with sequence similarity 53, member C##AK056193|REEP2|51308|receptor accessory protein 2##AK291101|REEP2|51308|receptor accessory protein 2##AK223611|REEP2|51308|receptor accessory protein 2##BC006218|REEP2|51308|receptor accessory protein 2##NM_016606|REEP2|51308|receptor accessory protein 2##AK293480|REEP2|51308|receptor accessory protein 2##AK290547|REEP2|51308|receptor accessory protein 2##AY562240|REEP2|51308|receptor accessory protein 2##AF251041|REEP2|51308|receptor accessory protein 2##AK298101|EGR1|1958|early growth response 1##AK301065|EGR1|1958|early growth response 1	0.830069	CTCF.p2:16:0.830
chr8	71752014	71752118	reg1017489.p1	7.699	+	AY534247 BC111381 NM_001011720 BC151845 BC137104 BC137105	-170426	+	TSC_hg19_v1_chr8_-_71581419 BC000878 BC008505 NM_016027	-170617	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	-170682	-	AF467247 BC121798 BC121799 AJ000097 NM_172058 NM_172059 NM_172060	516783	-	AK127798 AK295897 TSC_hg19_v1_chr8_-_72274006	521919	-	TSC_hg19_v1_chr8_-_72274302 AK307379	522227	-	AY534247|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC111381|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##NM_001011720|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC151845|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137104|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137105|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC000878|LACTB2|51110|lactamase, beta 2##BC008505|LACTB2|51110|lactamase, beta 2##NM_016027|LACTB2|51110|lactamase, beta 2##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2##AF467247|EYA1|2138|eyes absent homolog 1 (Drosophila)##BC121798|EYA1|2138|eyes absent homolog 1 (Drosophila)##BC121799|EYA1|2138|eyes absent homolog 1 (Drosophila)##AJ000097|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172058|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172059|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172060|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)	0.9989	CTCF.p2:-10:0.999
chr10	108471218	108471330	reg1018224.p1	7.698	+	TSC_hg19_v1_chr10_-_108459000 AK123752	-12215	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-2070229	+	AB028982 NM_014978	-2070416	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	453102	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	3211935	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	3212003	-	AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.999327	CTCF.p2:-3:0.999
chr16	3081769	3081891	reg1019366.p1	7.698	+	BC064026 BC065514 NM_001002017 NM_001002018 NM_017885	-7575	-	TSC_hg19_v1_chr16_+_3074062 AK075330 BC050674	-7754	+	TSC_hg19_v1_chr16_+_3074053 AK314086	-7775	+	BC128602 NM_001103175	3711	-	AJ272137 NM_022468 AJ239053 AB042328 AF145442 AF185270	14957	+	BC026114 BC045731 TSC_hg19_v1_chr16_-_3109353	27527	-	BC064026|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##BC065514|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##NM_001002017|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##NM_001002018|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##NM_017885|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##AK075330|THOC6|79228|THO complex 6 homolog (Drosophila)##BC050674|THOC6|79228|THO complex 6 homolog (Drosophila)##AK314086|THOC6|79228|THO complex 6 homolog (Drosophila)##BC128602|CCDC64B|146439|coiled-coil domain containing 64B##NM_001103175|CCDC64B|146439|coiled-coil domain containing 64B##AJ272137|MMP25|64386|matrix metallopeptidase 25##NM_022468|MMP25|64386|matrix metallopeptidase 25##AJ239053|MMP25|64386|matrix metallopeptidase 25##AB042328|MMP25|64386|matrix metallopeptidase 25##AF145442|MMP25|64386|matrix metallopeptidase 25##AF185270|MMP25|64386|matrix metallopeptidase 25##BC026114|LOC100507419|100507419|uncharacterized LOC100507419##BC045731|LOC100507419|100507419|uncharacterized LOC100507419	0.080902	
chr2	156107433	156107555	reg1017622.p1	7.698	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-552305	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-1379050	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-1772243	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	1079196	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	1081669	-	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	1184464	+	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	1.293869	CTCF.p2:9:0.994	CTCF.p2:30:0.300
chrY	1207821	1207946	reg1019178.p1	7.698	+	NM_000451 NM_006883 U89331	-672805	+	AK293506 NM_013239	-910194	-	NM_018390 BC064136 BC005028 BC000888 BC032072	-1059776	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	73701	-	NM_001161529 NM_001161531 NM_001161532 NM_006140 NM_172245 NM_172246 NM_172249 AK293086 AK301395 BC071835 M64445 BC002635 AL833597 AK309630 L29348 L29349 U93096 X17648	129831	+	NM_001161530 NM_172247 M73832 DQ893104 DQ896376 AB590144 CU687176 DQ841258 X54935	143700	+	NM_000451|SHOX|6473|short stature homeobox##NM_006883|SHOX|6473|short stature homeobox##U89331|SHOX|6473|short stature homeobox##AK293506|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_013239|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_018390|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC064136|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC005028|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC000888|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC032072|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2##NM_001161529|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161531|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161532|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_006140|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172245|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172246|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172249|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK293086|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK301395|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC071835|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M64445|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC002635|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AL833597|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK309630|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29348|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29349|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##U93096|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X17648|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161530|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172247|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M73832|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ893104|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ896376|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ841258|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X54935|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)	0.973812	CTCF.p2:-14:0.974
chr10	135132260	135132396	reg1018239.p1	7.697	+	TSC_hg19_v1_chr10_+_135122914 EU937518	-9413	+	AK223586 NM_006659	-9732	-	TSC_hg19_v1_chr10_+_135122444 BC015139 BC019897 NM_145806 AK091711 AX747142 AK292380	-9919	+	TSC_hg19_v1_chr10_-_135150429 BC038978 AF225903	18074	-	NM_015722 TSC_hg19_v1_chr10_-_135150480	18149	-	NM_001145201 NM_145202 AY358908 BC093853 BC101743 BC143590 BC143591 BC143592 TSC_hg19_v1_chr10_+_135160889 AF421885 GU727628 BC061643 BC071872	28548	+	AK223586|TUBGCP2|10844|tubulin, gamma complex associated protein 2##NM_006659|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC015139|ZNF511|118472|zinc finger protein 511##BC019897|ZNF511|118472|zinc finger protein 511##NM_145806|ZNF511|118472|zinc finger protein 511##AK091711|ZNF511|118472|zinc finger protein 511##AK292380|ZNF511|118472|zinc finger protein 511##BC038978|CALY|50632|calcyon neuron-specific vesicular protein##AF225903|CALY|50632|calcyon neuron-specific vesicular protein##NM_015722|CALY|50632|calcyon neuron-specific vesicular protein##NM_001145201|PRAP1|118471|proline-rich acidic protein 1##NM_145202|PRAP1|118471|proline-rich acidic protein 1##AY358908|PRAP1|118471|proline-rich acidic protein 1##BC093853|PRAP1|118471|proline-rich acidic protein 1##BC101743|PRAP1|118471|proline-rich acidic protein 1##BC143590|PRAP1|118471|proline-rich acidic protein 1##BC143591|PRAP1|118471|proline-rich acidic protein 1##BC143592|PRAP1|118471|proline-rich acidic protein 1##AF421885|PRAP1|118471|proline-rich acidic protein 1##BC061643|PRAP1|118471|proline-rich acidic protein 1##BC071872|PRAP1|118471|proline-rich acidic protein 1	0.953122	CTCF.p2:24:0.953
chr12	4530792	4530926	reg1017312.p1	7.697	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	-42059	-	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	-100468	+	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	-147815	+	BC121097 BC121098 NM_020996 X63454	23920	-	TSC_hg19_v1_chr12_-_4647633 AJ272205 BC016908	116760	-	AL834377 NM_020374 TSC_hg19_v1_chr12_-_4647648	116787	-	AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##BC121097|FGF6|2251|fibroblast growth factor 6##BC121098|FGF6|2251|fibroblast growth factor 6##NM_020996|FGF6|2251|fibroblast growth factor 6##X63454|FGF6|2251|fibroblast growth factor 6##AJ272205|C12orf4|57102|chromosome 12 open reading frame 4##BC016908|C12orf4|57102|chromosome 12 open reading frame 4##AL834377|C12orf4|57102|chromosome 12 open reading frame 4##NM_020374|C12orf4|57102|chromosome 12 open reading frame 4	0.999667	CTCF.p2:-9:1.000
chr15	50344125	50344273	reg1020502.p1	7.697	+	TSC_hg19_v1_chr15_+_49913254 NM_001144955 NM_020234 BC018028 AF168717 AK290184 BC093073 BC032535	-430950	+	BC048125 BC048139 AK057362 NM_152647	-431116	-	NM_002009 BC010956 AK313160 M60828 S81661	-628783	+	AB075819 TSC_hg19_v1_chr15_-_50405521	61317	-	TSC_hg19_v1_chr15_-_50411492 BC144298 BC144297 NM_024837	67267	-	TSC_hg19_v1_chr15_+_50474425 AK290262 NM_001159629 NM_003645 AF096290 AK222859 D88308 AK223145 BC057770 CU691220	130291	+	NM_001144955|DTWD1|56986|DTW domain containing 1##NM_020234|DTWD1|56986|DTW domain containing 1##BC018028|DTWD1|56986|DTW domain containing 1##AF168717|DTWD1|56986|DTW domain containing 1##AK290184|DTWD1|56986|DTW domain containing 1##BC093073|DTWD1|56986|DTW domain containing 1##BC032535|DTWD1|56986|DTW domain containing 1##BC048125|C15orf33|196951|chromosome 15 open reading frame 33##BC048139|C15orf33|196951|chromosome 15 open reading frame 33##AK057362|C15orf33|196951|chromosome 15 open reading frame 33##NM_152647|C15orf33|196951|chromosome 15 open reading frame 33##NM_002009|FGF7|2252|fibroblast growth factor 7##BC010956|FGF7|2252|fibroblast growth factor 7##AK313160|FGF7|2252|fibroblast growth factor 7##M60828|FGF7|2252|fibroblast growth factor 7##S81661|FGF7|2252|fibroblast growth factor 7##AB075819|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4##AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	0.788624	CTCF.p2:24:0.789
chr2	86477269	86477390	reg1015798.p1	7.697	+	NM_016622 NM_145644 TSC_hg19_v1_chr2_+_86426604 BC020651 AK074352 AK314555 AK314577 AF208849 AL832982 CU676602	-50745	+	NM_001100169 NM_001100170 NM_006839	-54437	-	TSC_hg19_v1_chr2_-_86422614 BX537369 L42572	-54674	-	AY562239 CR457301 CU687956 AK297201 TSC_hg19_v1_chr2_-_86564750 BC064846 AK294300 AK297359 AK297373 AK299334 AK023172 NM_001164731 NM_001164732 NM_022912	87404	-	AK297287 NM_001164730	87876	-	NM_018433	190941	+	NM_016622|MRPL35|51318|mitochondrial ribosomal protein L35##NM_145644|MRPL35|51318|mitochondrial ribosomal protein L35##BC020651|MRPL35|51318|mitochondrial ribosomal protein L35##AK074352|MRPL35|51318|mitochondrial ribosomal protein L35##AK314555|MRPL35|51318|mitochondrial ribosomal protein L35##AK314577|MRPL35|51318|mitochondrial ribosomal protein L35##AF208849|MRPL35|51318|mitochondrial ribosomal protein L35##AL832982|MRPL35|51318|mitochondrial ribosomal protein L35##NM_001100169|IMMT|10989|inner membrane protein, mitochondrial##NM_001100170|IMMT|10989|inner membrane protein, mitochondrial##NM_006839|IMMT|10989|inner membrane protein, mitochondrial##BX537369|IMMT|10989|inner membrane protein, mitochondrial##L42572|IMMT|10989|inner membrane protein, mitochondrial##AY562239|REEP1|65055|receptor accessory protein 1##CR457301|REEP1|65055|receptor accessory protein 1##AK297201|REEP1|65055|receptor accessory protein 1##BC064846|REEP1|65055|receptor accessory protein 1##AK294300|REEP1|65055|receptor accessory protein 1##AK297359|REEP1|65055|receptor accessory protein 1##AK297373|REEP1|65055|receptor accessory protein 1##AK299334|REEP1|65055|receptor accessory protein 1##AK023172|REEP1|65055|receptor accessory protein 1##NM_001164731|REEP1|65055|receptor accessory protein 1##NM_001164732|REEP1|65055|receptor accessory protein 1##NM_022912|REEP1|65055|receptor accessory protein 1##AK297287|REEP1|65055|receptor accessory protein 1##NM_001164730|REEP1|65055|receptor accessory protein 1##NM_018433|KDM3A|55818|lysine (K)-specific demethylase 3A	0.772836	CTCF.p2:26:0.376	CTCF.p2:-51:0.276
chr6	130214981	130215126	reg1019174.p1	7.697	+	NM_001010876	-32638	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	-183727	-	NM_000426 NM_001079823 Z26653	-1010740	+	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	124672	+	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	321402	-	AK091882 AX747235 NM_001017373	329045	-	NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3	0.986856	CTCF.p2:-4:0.987
chr1	805254	805350	reg1017570.p2	7.696	+	TSC_hg19_v1_chr1_+_763052 AK311121 AK311732 AK026873 BC102012 BC102023 BC107481	-42232	+	BC042880 TSC_hg19_v1_chr1_+_763038	-42289	+	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	-42407	-	TSC_hg19_v1_chr1_+_861084 NM_152486	55799	+	AB463150 AM393843 CU678496 TSC_hg19_v1_chr1_-_894632 AL050019 AK024284 AK225239 BC009786	89326	-	TSC_hg19_v1_chr1_-_894646 AK315080	89343	-	AK311732|LOC643837|643837|uncharacterized LOC643837##AK026873|LOC643837|643837|uncharacterized LOC643837##BC102012|LOC643837|643837|uncharacterized LOC643837##BC102023|LOC643837|643837|uncharacterized LOC643837##BC107481|LOC643837|643837|uncharacterized LOC643837##BC042880|LOC643837|643837|uncharacterized LOC643837##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115##NM_152486|SAMD11|148398|sterile alpha motif domain containing 11##AM393843|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AL050019|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK024284|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK225239|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##BC009786|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK315080|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)	0.998505	CTCF.p2:5:0.999
chr2	147685009	147685133	reg1019518.p1	7.696	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-2407150	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-2407440	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-2409868	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	917046	+	TSC_hg19_v1_chr2_+_148602300 AK314124	917264	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	917574	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.711819	CTCF.p2:-7:0.712
chr18	70211657	70211756	reg1018394.p2	7.695	+	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	-931	-	TSC_hg19_v1_chr18_+_67956280 BC020082	-2255445	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-2255539	+	NM_182511 TSC_hg19_v1_chr18_-_70211738	24	-	AF448839 NM_138999	321227	-	AF448838 BC050329 NM_001201465 NM_138966	323103	-	BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.495615	CTCF.p2:10:0.496
chr19	55394293	55394429	reg1020255.p1	7.695	+	NM_002000 NM_133269 NM_133271 NM_133272 NM_133273 NM_133274 NM_133277 NM_133278 NM_133279 AK290922 BC027953 U56236 U56237 U43677 U43774 DQ890935 DQ894098 AB590300 CU693344 D87853 D87854 D87855 D87856 D87857 D87858 D87859 D87860 D87861 D87862 DQ075334 DQ075335 DQ075336 DQ075337 DQ075338 DQ075339 S82919 X92558 X92559 X92560 X92561 X92562	-8715	+	AF262967 AF263617 NM_001242867 NM_006737 X93595 BC105678 BC107951 L41270 AY366256 L76665 L76666 U30272 AJ276125 X94373 AY789067 AY789068 AY789070 EF582384 X93596 X94374	-32448	+	BC144566 BC171788 X94609 AF002255 NM_012314 AY388472 AY366245 BC127084 BC096694 BC101977 BC103693 L76671 AY366246 AB590477 AY102623 U24077 AY789064	-50179	+	AJ001383 NM_001145457 NM_001145458 NM_001242356 NM_001242357 NM_004829 BC030265 BC064806 AJ006121 AJ006122 AJ006123 AY346373 CU687946	23165	+	BC109124 BC109125 AY154462 NM_001127255 NM_139176 NM_206828 AK298630	64515	-	NM_001174081	82290	+	NM_002000|FCAR|2204|Fc fragment of IgA, receptor for##NM_133269|FCAR|2204|Fc fragment of IgA, receptor for##NM_133271|FCAR|2204|Fc fragment of IgA, receptor for##NM_133272|FCAR|2204|Fc fragment of IgA, receptor for##NM_133273|FCAR|2204|Fc fragment of IgA, receptor for##NM_133274|FCAR|2204|Fc fragment of IgA, receptor for##NM_133277|FCAR|2204|Fc fragment of IgA, receptor for##NM_133278|FCAR|2204|Fc fragment of IgA, receptor for##NM_133279|FCAR|2204|Fc fragment of IgA, receptor for##AK290922|FCAR|2204|Fc fragment of IgA, receptor for##BC027953|FCAR|2204|Fc fragment of IgA, receptor for##U56236|FCAR|2204|Fc fragment of IgA, receptor for##U56237|FCAR|2204|Fc fragment of IgA, receptor for##U43677|FCAR|2204|Fc fragment of IgA, receptor for##U43774|FCAR|2204|Fc fragment of IgA, receptor for##DQ890935|FCAR|2204|Fc fragment of IgA, receptor for##DQ894098|FCAR|2204|Fc fragment of IgA, receptor for##D87853|FCAR|2204|Fc fragment of IgA, receptor for##D87854|FCAR|2204|Fc fragment of IgA, receptor for##D87855|FCAR|2204|Fc fragment of IgA, receptor for##D87856|FCAR|2204|Fc fragment of IgA, receptor for##D87857|FCAR|2204|Fc fragment of IgA, receptor for##D87858|FCAR|2204|Fc fragment of IgA, receptor for##D87859|FCAR|2204|Fc fragment of IgA, receptor for##D87860|FCAR|2204|Fc fragment of IgA, receptor for##D87861|FCAR|2204|Fc fragment of IgA, receptor for##D87862|FCAR|2204|Fc fragment of IgA, receptor for##DQ075334|FCAR|2204|Fc fragment of IgA, receptor for##DQ075335|FCAR|2204|Fc fragment of IgA, receptor for##DQ075336|FCAR|2204|Fc fragment of IgA, receptor for##DQ075337|FCAR|2204|Fc fragment of IgA, receptor for##DQ075338|FCAR|2204|Fc fragment of IgA, receptor for##DQ075339|FCAR|2204|Fc fragment of IgA, receptor for##S82919|FCAR|2204|Fc fragment of IgA, receptor for##X92558|FCAR|2204|Fc fragment of IgA, receptor for##X92559|FCAR|2204|Fc fragment of IgA, receptor for##X92560|FCAR|2204|Fc fragment of IgA, receptor for##X92561|FCAR|2204|Fc fragment of IgA, receptor for##X92562|FCAR|2204|Fc fragment of IgA, receptor for##AF262967|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AF263617|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##NM_001242867|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##NM_006737|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##X93595|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##BC105678|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##BC107951|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##L41270|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AY366256|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##L76665|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##L76666|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##U30272|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AJ276125|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##X94373|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AY789067|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AY789068|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AY789070|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##EF582384|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##X93596|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##X94374|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##BC144566|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##BC171788|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##X94609|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AF002255|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##NM_012314|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AY388472|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AY366245|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##BC127084|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##BC096694|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##BC101977|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##BC103693|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##L76671|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AY366246|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AY102623|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##U24077|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AY789064|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AJ001383|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_001145457|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_001145458|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_001242356|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_001242357|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_004829|NCR1|9437|natural cytotoxicity triggering receptor 1##BC064806|NCR1|9437|natural cytotoxicity triggering receptor 1##AJ006121|NCR1|9437|natural cytotoxicity triggering receptor 1##AJ006122|NCR1|9437|natural cytotoxicity triggering receptor 1##AJ006123|NCR1|9437|natural cytotoxicity triggering receptor 1##AY346373|NCR1|9437|natural cytotoxicity triggering receptor 1##BC109124|NLRP7|199713|NLR family, pyrin domain containing 7##BC109125|NLRP7|199713|NLR family, pyrin domain containing 7##AY154462|NLRP7|199713|NLR family, pyrin domain containing 7##NM_001127255|NLRP7|199713|NLR family, pyrin domain containing 7##NM_139176|NLRP7|199713|NLR family, pyrin domain containing 7##NM_206828|NLRP7|199713|NLR family, pyrin domain containing 7##AK298630|NLRP7|199713|NLR family, pyrin domain containing 7##NM_001174081|NLRP2|55655|NLR family, pyrin domain containing 2	0.917033	CTCF.p2:-12:0.917
chr6	111887184	111887288	reg1018119.p1	7.695	+	TSC_hg19_v1_chr6_+_111804739 BC043575 BX647114 BC031311	-82536	+	AF071798 NM_002912 TSC_hg19_v1_chr6_-_111804420 AF058701	-82812	-	BC035823 TSC_hg19_v1_chr6_-_111804371	-82883	-	NM_001164283	1284	-	NM_001164282	7661	-	BC002823 AF085921 AF136405 TSC_hg19_v1_chr6_-_111927072 AK310922 AK025351 AK314415	39831	-	BC043575|TRAF3IP2-AS1|643749|TRAF3IP2 antisense RNA 1 (non-protein coding)##BX647114|TRAF3IP2-AS1|643749|TRAF3IP2 antisense RNA 1 (non-protein coding)##BC031311|TRAF3IP2-AS1|643749|TRAF3IP2 antisense RNA 1 (non-protein coding)##AF071798|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##NM_002912|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF058701|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##BC035823|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##NM_001164283|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_001164282|TRAF3IP2|10758|TRAF3 interacting protein 2##BC002823|TRAF3IP2|10758|TRAF3 interacting protein 2##AF085921|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136405|TRAF3IP2|10758|TRAF3 interacting protein 2##AK310922|TRAF3IP2|10758|TRAF3 interacting protein 2##AK025351|TRAF3IP2|10758|TRAF3 interacting protein 2##AK314415|TRAF3IP2|10758|TRAF3 interacting protein 2	0.0	
chrX	110095550	110095655	reg1017627.p1	7.695	+	NM_001143981 NM_001143982 NM_001143983	-56317	-	BC002909 AK293106 AK297563 AK312270 NM_145234	-56569	-	AK091430 NM_001171689	-412144	-	AK290504 NM_001128166 NM_001128167 TSC_hg19_v1_chrX_+_110187624 AK315284	91945	+	NM_002578 TSC_hg19_v1_chrX_+_110339395	243799	+	NM_001128168 NM_001128172 NM_001128173 AB102659 AF068864 AM943850 AM943851 AM943852	270715	+	NM_001143981|CHRDL1|91851|chordin-like 1##NM_001143982|CHRDL1|91851|chordin-like 1##NM_001143983|CHRDL1|91851|chordin-like 1##BC002909|CHRDL1|91851|chordin-like 1##AK293106|CHRDL1|91851|chordin-like 1##AK297563|CHRDL1|91851|chordin-like 1##AK312270|CHRDL1|91851|chordin-like 1##NM_145234|CHRDL1|91851|chordin-like 1##AK091430|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001171689|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128168|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128172|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128173|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AB102659|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AF068864|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943850|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943851|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943852|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	0.972414	CTCF.p2:12:0.972
chr14	90985365	90985484	reg1018194.p2	7.694	+	TSC_hg19_v1_chr14_+_90863372 BC011834 BC047523 U16851 BC000454 BC008597 AK289937 M27319	-121997	+	TSC_hg19_v1_chr14_+_90863329 NM_006888	-122101	+	BC008925 BC033136 BC098568 TSC_hg19_v1_chr14_-_90798286 AK000870 AK294958 BC021805 NM_017970	-187058	-	AB527232 TSC_hg19_v1_chr14_-_91282750	297274	-	NM_001010854 TSC_hg19_v1_chr14_-_91282765	297341	-	TSC_hg19_v1_chr14_-_91526731 CU677851	541330	-	BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008925|C14orf102|55051|chromosome 14 open reading frame 102##BC033136|C14orf102|55051|chromosome 14 open reading frame 102##BC098568|C14orf102|55051|chromosome 14 open reading frame 102##AK000870|C14orf102|55051|chromosome 14 open reading frame 102##AK294958|C14orf102|55051|chromosome 14 open reading frame 102##BC021805|C14orf102|55051|chromosome 14 open reading frame 102##NM_017970|C14orf102|55051|chromosome 14 open reading frame 102##NM_001010854|TTC7B|145567|tetratricopeptide repeat domain 7B	0.990505	CTCF.p2:5:0.991
chrX	130811806	130811927	reg1017391.p2	7.694	+	BC137050 AB529233 NM_001004486	-133868	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-388454	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-388604	-	TSC_hg19_v1_chrX_-_130964633 AK097911	152785	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	345455	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	345774	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.966842	CTCF.p2:19:0.967
chr15	82815041	82815176	reg1012602.p1	7.693	+	NM_198181 CR936812	-92892	+	TSC_hg19_v1_chr15_+_82647308 BC066934	-167777	+	NM_001164465	-173403	-	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	9785	-	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	129684	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	129782	+	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like	0.919612	CTCF.p2:-7:0.920
chr17	38020490	38020649	reg1016421.p2	7.693	+	BC032707 AF129512 AY377973 AY377975 AY377976 AY377977 AY377978 AY377979 AY377980 AY377981 AY377982 NM_012481 NM_183228 NM_183229 NM_183230 NM_183231 NM_183232	-139	-	AK290115 NM_001242443	-124350	+	AK125544 NM_001242442	-125546	+	AK292383 NM_198844 NM_199321 BC043152 AY251603 AY251604	3874	+	AF119884 NM_018530	53223	-	AK000409 AK296607 NM_001042471 NM_001165958 NM_001165959	54303	-	BC032707|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AF129512|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377973|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377975|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377976|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377977|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377978|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377979|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377980|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377981|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377982|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_012481|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183228|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183229|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183230|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183231|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183232|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AK290115|GRB7|2886|growth factor receptor-bound protein 7##NM_001242443|GRB7|2886|growth factor receptor-bound protein 7##AK125544|GRB7|2886|growth factor receptor-bound protein 7##NM_001242442|GRB7|2886|growth factor receptor-bound protein 7##AK292383|ZPBP2|124626|zona pellucida binding protein 2##NM_198844|ZPBP2|124626|zona pellucida binding protein 2##NM_199321|ZPBP2|124626|zona pellucida binding protein 2##BC043152|ZPBP2|124626|zona pellucida binding protein 2##AY251603|ZPBP2|124626|zona pellucida binding protein 2##AY251604|ZPBP2|124626|zona pellucida binding protein 2##AF119884|GSDMB|55876|gasdermin B##NM_018530|GSDMB|55876|gasdermin B##AK000409|GSDMB|55876|gasdermin B##AK296607|GSDMB|55876|gasdermin B##NM_001042471|GSDMB|55876|gasdermin B##NM_001165958|GSDMB|55876|gasdermin B##NM_001165959|GSDMB|55876|gasdermin B	0.0	
chr8	4695465	4695562	reg1017897.p1	7.693	+	AK128880 TSC_hg19_v1_chr8_-_2585966	-2109531	-	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-2702311	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-2742605	+	AY017307 TSC_hg19_v1_chr8_-_4852228	156712	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	156781	-	TSC_hg19_v1_chr8_-_6264053 BC036625	1568544	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.999296	CTCF.p2:-8:0.999
chr9	21235891	21236008	reg1017441.p1	7.693	+	M71246 BC096732 BC098355 M11026 NM_021268 M38289	-7727	-	AB463792 M28585 NM_002173 X00140	-18643	-	BC069409 BC103972 BC103973 NM_002171 V00551	-28808	-	BC104159 BC104160 BC074956 NM_002172 V00542	4033	-	BC093755 BC093757 NM_002169	69362	-	BX538121 BC064958 TSC_hg19_v1_chr9_-_21335388 AB037775 AL713669 BC039133 AK091715 AY172949 NM_018847	99384	-	M71246|IFNA17|3451|interferon, alpha 17##BC096732|IFNA17|3451|interferon, alpha 17##BC098355|IFNA17|3451|interferon, alpha 17##M11026|IFNA17|3451|interferon, alpha 17##NM_021268|IFNA17|3451|interferon, alpha 17##M38289|IFNA17|3451|interferon, alpha 17##M28585|IFNA16|3449|interferon, alpha 16##NM_002173|IFNA16|3449|interferon, alpha 16##X00140|IFNA16|3449|interferon, alpha 16##BC069409|IFNA10|3446|interferon, alpha 10##BC103972|IFNA10|3446|interferon, alpha 10##BC103973|IFNA10|3446|interferon, alpha 10##NM_002171|IFNA10|3446|interferon, alpha 10##V00551|IFNA10|3446|interferon, alpha 10##BC104159|IFNA14|3448|interferon, alpha 14##BC104160|IFNA14|3448|interferon, alpha 14##BC074956|IFNA14|3448|interferon, alpha 14##NM_002172|IFNA14|3448|interferon, alpha 14##V00542|IFNA14|3448|interferon, alpha 14##BC093755|IFNA5|3442|interferon, alpha 5##BC093757|IFNA5|3442|interferon, alpha 5##NM_002169|IFNA5|3442|interferon, alpha 5##BX538121|KLHL9|55958|kelch-like 9 (Drosophila)##BC064958|KLHL9|55958|kelch-like 9 (Drosophila)##AB037775|KLHL9|55958|kelch-like 9 (Drosophila)##AL713669|KLHL9|55958|kelch-like 9 (Drosophila)##BC039133|KLHL9|55958|kelch-like 9 (Drosophila)##AK091715|KLHL9|55958|kelch-like 9 (Drosophila)##AY172949|KLHL9|55958|kelch-like 9 (Drosophila)##NM_018847|KLHL9|55958|kelch-like 9 (Drosophila)	0.397813	CTCF.p2:-25:0.398
chr9	37262516	37262663	reg1015023.p1	7.693	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-142006	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-142081	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-142103	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	160117	+	BC010007 TSC_hg19_v1_chr9_-_37465267	202671	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	202806	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.950305	CTCF.p2:11:0.950
chr10	123583556	123583702	reg1020620.p1	7.692	+	X52832 U11814 M87770 M87772 AB030073 AB030074 AB030075 AB030076 AB030077 AB030078 M80634 M87771 TSC_hg19_v1_chr10_-_123357946 M35718 M97193 BC096749 AK026508 BC039243 NM_000141 NM_001144917 NM_001144918 NM_001144919 NM_022970	-225871	-	AK294026 NM_001144915	-227471	-	AK308621 NM_001144916	-229858	-	TSC_hg19_v1_chr10_-_123687547 AK296356 AF079098 AF079099 AK303604 AK313057 BC022026 NM_001001976 NM_007041	103896	-	TSC_hg19_v1_chr10_-_123687979 AK299101 AK308926	104371	-	TSC_hg19_v1_chr10_-_123734310 AK301658 AK056579	150685	-	X52832|FGFR2|2263|fibroblast growth factor receptor 2##U11814|FGFR2|2263|fibroblast growth factor receptor 2##M87770|FGFR2|2263|fibroblast growth factor receptor 2##M87772|FGFR2|2263|fibroblast growth factor receptor 2##AB030073|FGFR2|2263|fibroblast growth factor receptor 2##AB030074|FGFR2|2263|fibroblast growth factor receptor 2##AB030075|FGFR2|2263|fibroblast growth factor receptor 2##AB030076|FGFR2|2263|fibroblast growth factor receptor 2##AB030077|FGFR2|2263|fibroblast growth factor receptor 2##AB030078|FGFR2|2263|fibroblast growth factor receptor 2##M80634|FGFR2|2263|fibroblast growth factor receptor 2##M87771|FGFR2|2263|fibroblast growth factor receptor 2##M97193|FGFR2|2263|fibroblast growth factor receptor 2##BC096749|FGFR2|2263|fibroblast growth factor receptor 2##AK026508|FGFR2|2263|fibroblast growth factor receptor 2##BC039243|FGFR2|2263|fibroblast growth factor receptor 2##NM_000141|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144917|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144918|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144919|FGFR2|2263|fibroblast growth factor receptor 2##NM_022970|FGFR2|2263|fibroblast growth factor receptor 2##AK294026|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2##AK308621|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144916|FGFR2|2263|fibroblast growth factor receptor 2##AK296356|ATE1|11101|arginyltransferase 1##AF079098|ATE1|11101|arginyltransferase 1##AF079099|ATE1|11101|arginyltransferase 1##AK303604|ATE1|11101|arginyltransferase 1##AK313057|ATE1|11101|arginyltransferase 1##BC022026|ATE1|11101|arginyltransferase 1##NM_001001976|ATE1|11101|arginyltransferase 1##NM_007041|ATE1|11101|arginyltransferase 1##AK299101|ATE1|11101|arginyltransferase 1##AK308926|ATE1|11101|arginyltransferase 1##AK301658|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##AK056579|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	0.93918	CTCF.p2:8:0.939
chr1	201317375	201317481	reg1018094.p2	7.692	+	NM_000299 NM_001005337 Z34974 AK315291 X79293 BC114571 BC115702	-64791	+	BC033185 NM_001164586	-157476	+	AK075335 AY138587 AK296307 TSC_hg19_v1_chr1_-_201123603 BC001106 AL136600 AK054883 AK303843 NM_016456	-193816	-	TSC_hg19_v1_chr1_-_201342319 X79855 X79856 X79858 CU678094 S64668 X74819 X79859	24952	-	TSC_hg19_v1_chr1_-_201346783 L40162 AY277394 X79861 BC002653	29360	-	NM_000364 NM_001001430 NM_001001431 NM_001001432 AK125236 TSC_hg19_v1_chr1_-_201346809 AK290621	29418	-	NM_000299|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##NM_001005337|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##Z34974|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##AK315291|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##X79293|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC114571|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC115702|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC033185|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##NM_001164586|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##AK075335|TMEM9|252839|transmembrane protein 9##AY138587|TMEM9|252839|transmembrane protein 9##AK296307|TMEM9|252839|transmembrane protein 9##BC001106|TMEM9|252839|transmembrane protein 9##AL136600|TMEM9|252839|transmembrane protein 9##AK054883|TMEM9|252839|transmembrane protein 9##AK303843|TMEM9|252839|transmembrane protein 9##NM_016456|TMEM9|252839|transmembrane protein 9##X79855|TNNT2|7139|troponin T type 2 (cardiac)##X79856|TNNT2|7139|troponin T type 2 (cardiac)##X79858|TNNT2|7139|troponin T type 2 (cardiac)##S64668|TNNT2|7139|troponin T type 2 (cardiac)##X74819|TNNT2|7139|troponin T type 2 (cardiac)##X79859|TNNT2|7139|troponin T type 2 (cardiac)##L40162|TNNT2|7139|troponin T type 2 (cardiac)##AY277394|TNNT2|7139|troponin T type 2 (cardiac)##X79861|TNNT2|7139|troponin T type 2 (cardiac)##BC002653|TNNT2|7139|troponin T type 2 (cardiac)##NM_000364|TNNT2|7139|troponin T type 2 (cardiac)##NM_001001430|TNNT2|7139|troponin T type 2 (cardiac)##NM_001001431|TNNT2|7139|troponin T type 2 (cardiac)##NM_001001432|TNNT2|7139|troponin T type 2 (cardiac)##AK125236|TNNT2|7139|troponin T type 2 (cardiac)##AK290621|TNNT2|7139|troponin T type 2 (cardiac)	0.0	
chr4	3374818	3374986	reg1015843.p2	7.692	+	AF030109 NM_198227	-3179	+	TSC_hg19_v1_chr4_+_3318244 BC106944	-56600	+	AF030111 NM_002926 NM_198229	-59029	+	BC112190 BC112192 TSC_hg19_v1_chr4_+_3443674	68765	+	TSC_hg19_v1_chr4_+_3443701 AK314099 D14012 NM_001528	68806	+	NM_001164673 NM_173660 AK091037 AX746744 BC141852 BC131544 AB220918	90165	+	AF030109|RGS12|6002|regulator of G-protein signaling 12##NM_198227|RGS12|6002|regulator of G-protein signaling 12##BC106944|RGS12|6002|regulator of G-protein signaling 12##AF030111|RGS12|6002|regulator of G-protein signaling 12##NM_002926|RGS12|6002|regulator of G-protein signaling 12##NM_198229|RGS12|6002|regulator of G-protein signaling 12##BC112190|HGFAC|3083|HGF activator##BC112192|HGFAC|3083|HGF activator##AK314099|HGFAC|3083|HGF activator##D14012|HGFAC|3083|HGF activator##NM_001528|HGFAC|3083|HGF activator##NM_001164673|DOK7|285489|docking protein 7##NM_173660|DOK7|285489|docking protein 7##AK091037|DOK7|285489|docking protein 7##BC141852|DOK7|285489|docking protein 7##BC131544|DOK7|285489|docking protein 7##AB220918|DOK7|285489|docking protein 7	0.95504	CTCF.p2:-15:0.955
chr7	35113144	35113262	reg1017888.p2	7.692	+	DQ287932 NM_015283	-35551	-	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	-415284	+	AK289963 NM_133468 AK096150 BC060868	-1168061	+	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	112589	-	TSC_hg19_v1_chr7_-_35293701 NM_001077653 NM_001166220 DQ986374	180527	-	TSC_hg19_v1_chr7_-_35734533 BC005091	621393	-	DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##NM_001077653|TBX20|57057|T-box 20##NM_001166220|TBX20|57057|T-box 20##DQ986374|TBX20|57057|T-box 20##BC005091|HERPUD2|64224|HERPUD family member 2	0.999851	CTCF.p2:-19:1.000
chrUn_gl000222	173203	173305	reg1017911.p1	7.692	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999894	CTCF.p2:0:1.000
chr10	3917599	3917771	reg1014388.p2	7.691	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-90176	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-90374	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-702680	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	950733	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1087829	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1087938	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr10	77155187	77155325	reg1017671.p2	7.691	+	TSC_hg19_v1_chr10_-_76995794 CU690500 BC023663 AK302283 AK074421 AY358476 BC047774 NM_144589 AK290452	-159485	-	BC012883 L08666 TSC_hg19_v1_chr10_+_76970608	-184646	+	TSC_hg19_v1_chr10_+_76970563 BC000165 BC072407 AK315919 AK296635	-184702	+	TSC_hg19_v1_chr10_-_77159861 AK092897 AX747796	4689	-	AK127647 TSC_hg19_v1_chr10_-_77160688	5414	-	TSC_hg19_v1_chr10_-_77161142 CU680472 EU446545 BC013011 BC021165	5954	-	BC023663|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK302283|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK074421|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AY358476|COMTD1|118881|catechol-O-methyltransferase domain containing 1##BC047774|COMTD1|118881|catechol-O-methyltransferase domain containing 1##NM_144589|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK290452|COMTD1|118881|catechol-O-methyltransferase domain containing 1##BC012883|VDAC2|7417|voltage-dependent anion channel 2##L08666|VDAC2|7417|voltage-dependent anion channel 2##BC000165|VDAC2|7417|voltage-dependent anion channel 2##BC072407|VDAC2|7417|voltage-dependent anion channel 2##AK315919|VDAC2|7417|voltage-dependent anion channel 2##AK296635|VDAC2|7417|voltage-dependent anion channel 2##AK092897|ZNF503|84858|zinc finger protein 503##AK127647|ZNF503|84858|zinc finger protein 503##EU446545|ZNF503|84858|zinc finger protein 503##BC013011|ZNF503|84858|zinc finger protein 503##BC021165|ZNF503|84858|zinc finger protein 503	0.954693	CTCF.p2:-4:0.955
chr13	99002332	99002422	reg1017989.p1	7.691	+	AB464689 EU446571 AF539427 BC025388 BC017585 NM_178861	-172872	-	TSC_hg19_v1_chr13_+_98795717 AB008430 BC065020	-206659	+	TSC_hg19_v1_chr13_+_98795470 BC041595	-206891	+	TSC_hg19_v1_chr13_+_99058147 AF339817	55829	+	AF083420 NM_003576	171918	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	226677	-	EU446571|RNF113B|140432|ring finger protein 113B##AF539427|RNF113B|140432|ring finger protein 113B##BC025388|RNF113B|140432|ring finger protein 113B##BC017585|RNF113B|140432|ring finger protein 113B##NM_178861|RNF113B|140432|ring finger protein 113B##AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC041595|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##AF083420|STK24|8428|serine/threonine kinase 24##NM_003576|STK24|8428|serine/threonine kinase 24##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24	0.2922	CTCF.p2:21:0.292
chr2	26726383	26726500	reg1017547.p2	7.690	+	AF107403 AF183186 AF183187 NM_004802 NM_194322 NM_194323	-25532	-	TSC_hg19_v1_chr2_+_26624787 AK057222 NM_145038 AK289953 AK307094	-101644	+	AK122995 AY358172 NM_153835	-156794	-	AF183185 NM_194248	55124	-	TSC_hg19_v1_chr2_+_26785463 NM_001105519	59027	+	BC140923 NM_001029881 BC127685 BC127684	137781	-	AF107403|OTOF|9381|otoferlin##AF183186|OTOF|9381|otoferlin##AF183187|OTOF|9381|otoferlin##NM_004802|OTOF|9381|otoferlin##NM_194322|OTOF|9381|otoferlin##NM_194323|OTOF|9381|otoferlin##AK057222|CCDC164|92749|coiled-coil domain containing 164##NM_145038|CCDC164|92749|coiled-coil domain containing 164##AK289953|CCDC164|92749|coiled-coil domain containing 164##AK307094|CCDC164|92749|coiled-coil domain containing 164##AK122995|GPR113|165082|G protein-coupled receptor 113##AY358172|GPR113|165082|G protein-coupled receptor 113##NM_153835|GPR113|165082|G protein-coupled receptor 113##AF183185|OTOF|9381|otoferlin##NM_194248|OTOF|9381|otoferlin##NM_001105519|C2orf70|339778|chromosome 2 open reading frame 70##BC140923|CIB4|130106|calcium and integrin binding family member 4##NM_001029881|CIB4|130106|calcium and integrin binding family member 4##BC127685|CIB4|130106|calcium and integrin binding family member 4##BC127684|CIB4|130106|calcium and integrin binding family member 4	0.323024	CTCF.p2:6:0.323
chr3	73105626	73105760	reg1016195.p1	7.690	+	TSC_hg19_v1_chr3_+_73046081 AF327345 NM_174907 BC128136 BC128137	-59573	+	TSC_hg19_v1_chr3_+_73045984 BC110889	-59702	+	TSC_hg19_v1_chr3_+_73045961 AK289901 BC100281	-59736	+	BC051316 BC064501 NM_018029	5116	+	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	568345	-	AB384611 BC150608 NM_020872	1464609	-	AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)	0.952302	CTCF.p2:27:0.952
chr6	38639762	38639909	reg1018489.p1	7.689	+	NM_001099272 NM_052893	-31912	-	TSC_hg19_v1_chr6_-_38607697 BX537534	-32169	-	AB067467 TSC_hg19_v1_chr6_-_38607611	-32230	-	BT019987 BT019988 CU674854 S83285 TSC_hg19_v1_chr6_-_38670850 AB209801 AK130312	31005	-	TSC_hg19_v1_chr6_-_38670880 BC015934	31040	-	TSC_hg19_v1_chr6_-_38670886 AK129573 L07837 BC001741 AL833442	31057	-	NM_001099272|BTBD9|114781|BTB (POZ) domain containing 9##NM_052893|BTBD9|114781|BTB (POZ) domain containing 9##BX537534|BTBD9|114781|BTB (POZ) domain containing 9##AB067467|BTBD9|114781|BTB (POZ) domain containing 9##BT019987|GLO1|2739|glyoxalase I##BT019988|GLO1|2739|glyoxalase I##S83285|GLO1|2739|glyoxalase I##AB209801|GLO1|2739|glyoxalase I##AK130312|GLO1|2739|glyoxalase I##BC015934|GLO1|2739|glyoxalase I##AK129573|GLO1|2739|glyoxalase I##L07837|GLO1|2739|glyoxalase I##BC001741|GLO1|2739|glyoxalase I##AL833442|GLO1|2739|glyoxalase I	0.199549	
chr10	134717901	134717997	reg1017546.p1	7.688	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	-118443	-	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	-366637	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-459266	+	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	38089	-	NM_001083909 TSC_hg19_v1_chr10_+_134901429 AK124728	183508	+	TSC_hg19_v1_chr10_+_134973945 NM_152643 AK090457	256022	+	BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40##NM_001083909|GPR123|84435|G protein-coupled receptor 123##AK124728|GPR123|84435|G protein-coupled receptor 123##NM_152643|KNDC1|85442|kinase non-catalytic C-lobe domain (KIND) containing 1##AK090457|KNDC1|85442|kinase non-catalytic C-lobe domain (KIND) containing 1	0.870237	CTCF.p2:-14:0.870
chr1	165338602	165338741	reg1018259.p1	7.688	+	AK127724 NM_177398	-12720	-	AK122800 NM_001174069	-13196	-	TSC_hg19_v1_chr1_+_164818083 AK022520	-520548	+	AB593016 AK312922 NM_006917	75874	-	TSC_hg19_v1_chr1_+_165513441 NM_001005214 BC132981 BC132983	174801	+	NM_004528	261438	+	AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AB593016|RXRG|6258|retinoid X receptor, gamma##AK312922|RXRG|6258|retinoid X receptor, gamma##NM_006917|RXRG|6258|retinoid X receptor, gamma##NM_001005214|LRRC52|440699|leucine rich repeat containing 52##BC132981|LRRC52|440699|leucine rich repeat containing 52##BC132983|LRRC52|440699|leucine rich repeat containing 52##NM_004528|MGST3|4259|microsomal glutathione S-transferase 3	0.803103	CTCF.p2:4:0.803
chr12	48357180	48357308	reg1015975.p1	7.687	+	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	-58443	-	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	-143580	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-190210	+	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	94	+	TSC_hg19_v1_chr12_+_48357387 AK310035 AK313698 AK299154 BC107792	176	+	NM_001844 NM_033150 TSC_hg19_v1_chr12_-_48398292	41044	-	J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C##AK310035|TMEM106C|79022|transmembrane protein 106C##AK313698|TMEM106C|79022|transmembrane protein 106C##AK299154|TMEM106C|79022|transmembrane protein 106C##BC107792|TMEM106C|79022|transmembrane protein 106C##NM_001844|COL2A1|1280|collagen, type II, alpha 1##NM_033150|COL2A1|1280|collagen, type II, alpha 1	0.949433	CTCF.p2:17:0.949
chr1	97311147	97311256	reg1017426.p1	7.687	+	BC030757 TSC_hg19_v1_chr1_+_97260652	-50618	+	NM_021190 TSC_hg19_v1_chr1_+_97187343 AK092216 AB051232 AK299755 AK299922 AB209266 AF530580 AF530581 AF176085 AK299897 BC016582 AB051233	-123917	+	AB055763 TSC_hg19_v1_chr1_-_97145197	-166005	-	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	1075288	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	1075358	-	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	1075405	-	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2##AK092216|PTBP2|58155|polypyrimidine tract binding protein 2##AB051232|PTBP2|58155|polypyrimidine tract binding protein 2##AK299755|PTBP2|58155|polypyrimidine tract binding protein 2##AK299922|PTBP2|58155|polypyrimidine tract binding protein 2##AB209266|PTBP2|58155|polypyrimidine tract binding protein 2##AF530580|PTBP2|58155|polypyrimidine tract binding protein 2##AF530581|PTBP2|58155|polypyrimidine tract binding protein 2##AF176085|PTBP2|58155|polypyrimidine tract binding protein 2##AK299897|PTBP2|58155|polypyrimidine tract binding protein 2##BC016582|PTBP2|58155|polypyrimidine tract binding protein 2##AB051233|PTBP2|58155|polypyrimidine tract binding protein 2##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase	0.61238	CTCF.p2:2:0.588
chr21	43032458	43032593	reg1006421.p1	7.687	+	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	-152442	-	TSC_hg19_v1_chr21_-_42880078 AF329454 EU090249 HM245389 HM245390	-152448	-	AK291813 TSC_hg19_v1_chr21_-_42880030 AK296860 NM_001135099 BC051839 AF270487 BC035623	-152538	-	TSC_hg19_v1_chr21_-_43187213 EU832165 EU832259 BC035755 BC110617 BC110618 AB047783 AJ278016 NM_020639	154697	-	AK027424 TSC_hg19_v1_chr21_-_43187270	154742	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	266973	-	BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2##AF329454|TMPRSS2|7113|transmembrane protease, serine 2##EU090249|TMPRSS2|7113|transmembrane protease, serine 2##HM245389|TMPRSS2|7113|transmembrane protease, serine 2##HM245390|TMPRSS2|7113|transmembrane protease, serine 2##AK291813|TMPRSS2|7113|transmembrane protease, serine 2##AK296860|TMPRSS2|7113|transmembrane protease, serine 2##NM_001135099|TMPRSS2|7113|transmembrane protease, serine 2##BC051839|TMPRSS2|7113|transmembrane protease, serine 2##AF270487|TMPRSS2|7113|transmembrane protease, serine 2##BC035623|TMPRSS2|7113|transmembrane protease, serine 2##EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4##NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15	0.166915	
chr2	64789373	64789521	reg1016970.p2	7.687	+	TSC_hg19_v1_chr2_+_64751580 AL833962	-37845	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	-37963	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	-107799	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	91402	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	91600	-	TSC_hg19_v1_chr2_-_65090764 AK097952	301294	-	AL833962|AFTPH|54812|aftiphilin##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2	0.227792	CTCF.p2:0:0.228
chrX	44929784	44929885	reg1016165.p1	7.687	+	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-197398	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-226521	+	TSC_hg19_v1_chrX_-_44402101 BC035015 BC042813 NM_173794	-527680	-	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	130279	-	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	1376877	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	1475022	-	NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##BC035015|FUNDC1|139341|FUN14 domain containing 1##BC042813|FUNDC1|139341|FUN14 domain containing 1##NM_173794|FUNDC1|139341|FUN14 domain containing 1##BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674	0.999509	CTCF.p2:4:1.000
chr7	994310	994420	reg1016890.p2	7.686	+	TSC_hg19_v1_chr7_-_994317 NM_006869	-52	-	TSC_hg19_v1_chr7_-_994129 AB587419 BC033747	-250	-	AK300644 AK300859 TSC_hg19_v1_chr7_-_960513	-33851	-	TSC_hg19_v1_chr7_-_994377 AJ006422	98	-	BC042434 BC053372 TSC_hg19_v1_chr7_-_1015171 BC058158 AK023185 BC110420 BC070383 AK290517 AY957566 BC103632 NM_001031617	20824	-	TSC_hg19_v1_chr7_+_1022816 BC025761 NM_017781	28453	+	NM_006869|ADAP1|11033|ArfGAP with dual PH domains 1##BC033747|ADAP1|11033|ArfGAP with dual PH domains 1##AK300644|ADAP1|11033|ArfGAP with dual PH domains 1##AK300859|ADAP1|11033|ArfGAP with dual PH domains 1##AJ006422|ADAP1|11033|ArfGAP with dual PH domains 1##BC042434|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC053372|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC058158|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK023185|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC110420|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC070383|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK290517|ADAP1|11033|ArfGAP with dual PH domains 1##AY957566|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC103632|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_001031617|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC025761|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##NM_017781|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1	0.0	
chr11	133489996	133490105	reg1018673.p1	7.685	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	-87736	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-676445	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-677036	-	AF521713 AK098717 NM_174927 BC058039	225331	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	336832	-	AJ416101 NM_001205329 NM_032801 AY358335 TSC_hg19_v1_chr11_+_133938938 AK074769 AF448478	448831	+	AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B##AJ416101|JAM3|83700|junctional adhesion molecule 3##NM_001205329|JAM3|83700|junctional adhesion molecule 3##NM_032801|JAM3|83700|junctional adhesion molecule 3##AY358335|JAM3|83700|junctional adhesion molecule 3##AK074769|JAM3|83700|junctional adhesion molecule 3##AF448478|JAM3|83700|junctional adhesion molecule 3	0.01534	
chr17	21003134	21003267	reg1016600.p2	7.685	+	TSC_hg19_v1_chr17_+_20978860 AB593144	-24319	+	TSC_hg19_v1_chr17_-_20946322 AB590105 AB028986 NM_015276	-56928	-	CU686685 BC068597 NM_001004306	-203808	-	TSC_hg19_v1_chr17_+_21030251 NM_015510 AL117567 AF151851 BC004126 BC009679 AK124055 CR457124	27076	+	TSC_hg19_v1_chr17_-_21117475 BT006768 AK311965 BC020815	114254	-	TSC_hg19_v1_chr17_-_21117480 BC002819	114288	-	AB028986|USP22|23326|ubiquitin specific peptidase 22##NM_015276|USP22|23326|ubiquitin specific peptidase 22##BC068597|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001004306|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_015510|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AL117567|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AF151851|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC004126|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC009679|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AK124055|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##CR457124|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BT006768|TMEM11|8834|transmembrane protein 11##AK311965|TMEM11|8834|transmembrane protein 11##BC020815|TMEM11|8834|transmembrane protein 11##BC002819|TMEM11|8834|transmembrane protein 11	0.028114	
chr21	39498905	39499020	reg1018961.p1	7.685	+	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	-5561	-	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	-210251	-	NM_130438 NM_001396 U52373 D85759 U58496	-706342	+	BC013327 NM_002243	129701	+	D87291 NM_170736 AK292812	129967	+	NM_170737	145466	+	HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170737|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.0	
chr7	92076578	92076706	reg1018939.p1	7.685	+	AB385463 TSC_hg19_v1_chr7_+_91924416	-152287	+	TSC_hg19_v1_chr7_+_91875536 AB037807 NM_019004 BC063861	-201033	+	TSC_hg19_v1_chr7_-_91875443 AJ294850 AF388384 NM_194455 NM_194456	-201229	-	TSC_hg19_v1_chr7_+_92076769 NM_021167 BC019350	134	+	TSC_hg19_v1_chr7_+_92076806 AK315788 AK026142 BC031091	198	+	AB587458 TSC_hg19_v1_chr7_+_92077172	474	+	AB037807|ANKIB1|54467|ankyrin repeat and IBR domain containing 1##NM_019004|ANKIB1|54467|ankyrin repeat and IBR domain containing 1##BC063861|ANKIB1|54467|ankyrin repeat and IBR domain containing 1##AJ294850|KRIT1|889|KRIT1, ankyrin repeat containing##AF388384|KRIT1|889|KRIT1, ankyrin repeat containing##NM_194455|KRIT1|889|KRIT1, ankyrin repeat containing##NM_194456|KRIT1|889|KRIT1, ankyrin repeat containing##NM_021167|GATAD1|57798|GATA zinc finger domain containing 1##BC019350|GATAD1|57798|GATA zinc finger domain containing 1##AK315788|GATAD1|57798|GATA zinc finger domain containing 1##AK026142|GATAD1|57798|GATA zinc finger domain containing 1##BC031091|GATAD1|57798|GATA zinc finger domain containing 1	0.0	
chrX	134476857	134476979	reg1018064.p2	7.685	+	AK091687 AX747129 NM_001185063 NM_007131 AK290215	-46946	-	AF520814 AY352211 NM_001031705 NM_017863	-171168	-	AK123302 TSC_hg19_v1_chrX_-_134232743	-244183	-	TSC_hg19_v1_chrX_-_134478038 AL831984 BC029787	1085	-	AY927530 NM_152695 TSC_hg19_v1_chrX_+_134478720 AK314344 AK074194 AL833407 AY280801 BC060768 BC065938 AL833109	1806	+	BC030620 TSC_hg19_v1_chrX_+_134555878 BC051704	78956	+	AK091687|ZNF75D|7626|zinc finger protein 75D##NM_001185063|ZNF75D|7626|zinc finger protein 75D##NM_007131|ZNF75D|7626|zinc finger protein 75D##AK290215|ZNF75D|7626|zinc finger protein 75D##AF520814|CXorf48|54967|chromosome X open reading frame 48##AY352211|CXorf48|54967|chromosome X open reading frame 48##NM_001031705|CXorf48|54967|chromosome X open reading frame 48##NM_017863|CXorf48|54967|chromosome X open reading frame 48##AK123302|LINC00087|644596|long intergenic non-protein coding RNA 87##AL831984|ZNF75D|7626|zinc finger protein 75D##BC029787|ZNF75D|7626|zinc finger protein 75D##AY927530|ZNF449|203523|zinc finger protein 449##NM_152695|ZNF449|203523|zinc finger protein 449##AK314344|ZNF449|203523|zinc finger protein 449##AK074194|ZNF449|203523|zinc finger protein 449##AL833407|ZNF449|203523|zinc finger protein 449##AY280801|ZNF449|203523|zinc finger protein 449##BC060768|ZNF449|203523|zinc finger protein 449##BC065938|ZNF449|203523|zinc finger protein 449##AL833109|ZNF449|203523|zinc finger protein 449##BC030620|LINC00086|399668|long intergenic non-protein coding RNA 86##BC051704|LINC00086|399668|long intergenic non-protein coding RNA 86	0.032078	
chr2	184159908	184160011	reg1017264.p1	7.684	+	AF411516 NM_138285 AF514993 BC022333 BC061698 AK289601 BC111016 TSC_hg19_v1_chr2_+_183989170 BC035597 AK290760 AK298199 CU692362	-170826	+	TSC_hg19_v1_chr2_+_183943518 AF486808 BC093958 BC112005 BC143337 AB038770 AB590332 DQ891206 DQ894389 BX647818	-216310	+	TSC_hg19_v1_chr2_+_183943474 AK314078 BC035000	-216481	+	AY327407 NM_194250 TSC_hg19_v1_chr2_+_185463097 AK307596	1303163	+	BC150198 TSC_hg19_v1_chr2_+_185463252 AK131402	1303284	+	BC142612 TSC_hg19_v1_chr2_+_185463319	1303346	+	AF411516|NUP35|129401|nucleoporin 35kDa##NM_138285|NUP35|129401|nucleoporin 35kDa##AF514993|NUP35|129401|nucleoporin 35kDa##BC022333|NUP35|129401|nucleoporin 35kDa##BC061698|NUP35|129401|nucleoporin 35kDa##AK289601|NUP35|129401|nucleoporin 35kDa##BC111016|NUP35|129401|nucleoporin 35kDa##BC035597|NUP35|129401|nucleoporin 35kDa##AK290760|NUP35|129401|nucleoporin 35kDa##AK298199|NUP35|129401|nucleoporin 35kDa##AF486808|DUSP19|142679|dual specificity phosphatase 19##BC093958|DUSP19|142679|dual specificity phosphatase 19##BC112005|DUSP19|142679|dual specificity phosphatase 19##BC143337|DUSP19|142679|dual specificity phosphatase 19##AB038770|DUSP19|142679|dual specificity phosphatase 19##DQ891206|DUSP19|142679|dual specificity phosphatase 19##DQ894389|DUSP19|142679|dual specificity phosphatase 19##BX647818|DUSP19|142679|dual specificity phosphatase 19##AK314078|DUSP19|142679|dual specificity phosphatase 19##BC035000|DUSP19|142679|dual specificity phosphatase 19##AY327407|ZNF804A|91752|zinc finger protein 804A##NM_194250|ZNF804A|91752|zinc finger protein 804A##AK307596|ZNF804A|91752|zinc finger protein 804A##BC150198|ZNF804A|91752|zinc finger protein 804A##AK131402|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A	0.694155	CTCF.p2:-7:0.694
chr19	19516185	19516320	reg1017410.p1	7.683	+	TSC_hg19_v1_chr19_+_19496634 NM_017660 AK303482	-19546	+	TSC_hg19_v1_chr19_+_19431662 AB385396	-84588	+	TSC_hg19_v1_chr19_+_19431637 NM_015329 AB020699	-84618	+	AB464723 DQ891603 DQ894797 AF329483 AK058166 AK313767 BC014611 NM_032037 AF348077	110113	-	TSC_hg19_v1_chr19_+_19626536 AF261134	110313	+	NM_015965 TSC_hg19_v1_chr19_+_19627033 BC009189 AK298891 AK293859 AK293965 BC000589 AF286697	110784	+	NM_017660|GATAD2A|54815|GATA zinc finger domain containing 2A##AK303482|GATAD2A|54815|GATA zinc finger domain containing 2A##NM_015329|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AB020699|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##DQ891603|TSSK6|83983|testis-specific serine kinase 6##DQ894797|TSSK6|83983|testis-specific serine kinase 6##AF329483|TSSK6|83983|testis-specific serine kinase 6##AK058166|TSSK6|83983|testis-specific serine kinase 6##AK313767|TSSK6|83983|testis-specific serine kinase 6##BC014611|TSSK6|83983|testis-specific serine kinase 6##NM_032037|TSSK6|83983|testis-specific serine kinase 6##AF348077|TSSK6|83983|testis-specific serine kinase 6##AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##NM_015965|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC009189|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AK293859|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC000589|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AF286697|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	0.916058	CTCF.p2:14:0.916
chr11	10329424	10329583	reg1015779.p1	7.682	+	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	-2874	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	-13737	-	AK098060 TSC_hg19_v1_chr11_+_9779882	-549641	+	AK295046 NM_001172431	142364	+	NM_000480 BC126118 TSC_hg19_v1_chr11_+_10472246 AK311436 M84720 AK289998 AK294444 AK313039 HQ258646	142892	+	NM_001025389 D12775 AK308181 M84721 AK299113 TSC_hg19_v1_chr11_+_10476953	147316	+	AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK098060|LOC283104|283104|uncharacterized LOC283104##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3##NM_000480|AMPD3|272|adenosine monophosphate deaminase 3##BC126118|AMPD3|272|adenosine monophosphate deaminase 3##AK311436|AMPD3|272|adenosine monophosphate deaminase 3##M84720|AMPD3|272|adenosine monophosphate deaminase 3##AK289998|AMPD3|272|adenosine monophosphate deaminase 3##AK294444|AMPD3|272|adenosine monophosphate deaminase 3##AK313039|AMPD3|272|adenosine monophosphate deaminase 3##HQ258646|AMPD3|272|adenosine monophosphate deaminase 3##NM_001025389|AMPD3|272|adenosine monophosphate deaminase 3##D12775|AMPD3|272|adenosine monophosphate deaminase 3##AK308181|AMPD3|272|adenosine monophosphate deaminase 3##M84721|AMPD3|272|adenosine monophosphate deaminase 3##AK299113|AMPD3|272|adenosine monophosphate deaminase 3	0.998372	CTCF.p2:1:0.998
chr12	2792230	2792333	reg1018757.p2	7.682	+	AB209016 AJ224873 AY830711 AY830712 AY830713 Z34809 Z34810 Z34811 Z34812 Z34813 Z34814 Z34815 Z34816 Z34817 Z34818 Z34819 Z34820 Z34821 Z34822 Z74996 TSC_hg19_v1_chr12_+_2162753	-629553	+	TSC_hg19_v1_chr12_+_2162452 NM_000719 NM_001129827 NM_001129829 NM_001129830 NM_001129831 NM_001129832 NM_001129833 NM_001129834 NM_001129835 NM_001129836 NM_001129837 NM_001129838 NM_001129839 NM_001129840 NM_001129841 NM_001129842 NM_001129843 NM_001129844 NM_001129846 NM_001167623 NM_001167624 NM_001167625 NM_199460 AK309111 AF465484 AK308652 BC146846	-629787	+	TSC_hg19_v1_chr12_-_2113622 AB463561 AK301109 AK056200 AK299203 BC043437 AY146652 NM_152640	-678610	-	TSC_hg19_v1_chr12_+_2904161 NM_002014 AK313918 BC001786 M88279 BC007924	111873	+	TSC_hg19_v1_chr12_+_2904310 AB385011 CU674888 DQ893668 DQ895800	112021	+	NM_018463 TSC_hg19_v1_chr12_+_2921842 AK130319 AK297189 AK291110 AK300905 AK027483 BC006552 BC013399 DQ892711 DQ895963 CU675449 AY599883	129575	+	AB209016|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AJ224873|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830711|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830712|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830713|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34809|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34810|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34811|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34812|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34813|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34814|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34815|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34816|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34817|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34818|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34819|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34820|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34821|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34822|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z74996|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK301109|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK056200|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK299203|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC043437|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AY146652|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_152640|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_002014|FKBP4|2288|FK506 binding protein 4, 59kDa##AK313918|FKBP4|2288|FK506 binding protein 4, 59kDa##BC001786|FKBP4|2288|FK506 binding protein 4, 59kDa##M88279|FKBP4|2288|FK506 binding protein 4, 59kDa##BC007924|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ893668|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ895800|FKBP4|2288|FK506 binding protein 4, 59kDa##NM_018463|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK130319|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK297189|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK291110|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK300905|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK027483|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC006552|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC013399|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ892711|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ895963|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AY599883|ITFG2|55846|integrin alpha FG-GAP repeat containing 2	0.996681	CTCF.p2:-17:0.997
chr1	64712128	64712261	reg1018950.p1	7.682	+	BC029895 NM_152489	-42705	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	-472535	+	NM_001172818 AK300100	-623301	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	224324	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	498605	+	TSC_hg19_v1_chr1_-_65432181 BC062431 BC009079 NM_002227	719820	-	BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##NM_020925|CACHD1|57685|cache domain containing 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2##BC062431|JAK1|3716|Janus kinase 1##BC009079|JAK1|3716|Janus kinase 1##NM_002227|JAK1|3716|Janus kinase 1	0.998162	CTCF.p2:15:0.998
chrX	40737252	40737403	reg1019551.p1	7.682	+	TSC_hg19_v1_chrX_-_40595139 AK308871	-142198	-	TSC_hg19_v1_chrX_-_40594999 AK293070	-142347	-	TSC_hg19_v1_chrX_-_40594795 AB006651 AF304448 BC098377 NM_004229	-142539	-	TSC_hg19_v1_chrX_+_40944880 NM_001039590 NM_001039591	207545	+	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	455323	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	456130	+	AK308871|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14##AB006651|MED14|9282|mediator complex subunit 14##AF304448|MED14|9282|mediator complex subunit 14##BC098377|MED14|9282|mediator complex subunit 14##NM_004229|MED14|9282|mediator complex subunit 14##NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked##NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	0.870594	CTCF.p2:-21:0.871
chr3	17936056	17936182	reg1020365.p1	7.681	+	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-151952	-	D86965 NM_014744	-153721	-	AK310539 NM_001134381	-194608	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	530678	-	BC001744 NM_001131010	544114	-	AK295633 AY053503 NM_144633 AB209053 AK309034	1253885	+	NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	0.0	
chr4	150292304	150292415	reg1019656.p1	7.681	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-928775	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-929020	-	TSC_hg19_v1_chr4_-_149357955 AB587357	-934377	-	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	707166	+	NM_006439	1210717	+	TSC_hg19_v1_chr4_-_151770612 AB208838	1478290	-	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.971391	CTCF.p2:-6:0.971
chr9	107148877	107149000	reg1017002.p2	7.681	+	TSC_hg19_v1_chr9_+_106856844 BC071750 NM_001042550 AK001485 BC032705 BC107891	-292066	+	TSC_hg19_v1_chr9_+_106856625 AY739716 BC130385 BC144163	-292285	+	TSC_hg19_v1_chr9_+_106856601 AL833191 NM_001042551 NM_006444 BC055081 BC061906 AK307752 AK292599 BC017845 AF092563	-292367	+	BC140739 AB529294 NM_001004485	117560	+	NM_001001919 AB463956	140551	-	AB529293 NM_001001961 BC136949 BC136952	150176	-	BC071750|SMC2|10592|structural maintenance of chromosomes 2##NM_001042550|SMC2|10592|structural maintenance of chromosomes 2##AK001485|SMC2|10592|structural maintenance of chromosomes 2##BC032705|SMC2|10592|structural maintenance of chromosomes 2##BC107891|SMC2|10592|structural maintenance of chromosomes 2##AY739716|SMC2|10592|structural maintenance of chromosomes 2##BC130385|SMC2|10592|structural maintenance of chromosomes 2##BC144163|SMC2|10592|structural maintenance of chromosomes 2##AL833191|SMC2|10592|structural maintenance of chromosomes 2##NM_001042551|SMC2|10592|structural maintenance of chromosomes 2##NM_006444|SMC2|10592|structural maintenance of chromosomes 2##BC055081|SMC2|10592|structural maintenance of chromosomes 2##BC061906|SMC2|10592|structural maintenance of chromosomes 2##AK307752|SMC2|10592|structural maintenance of chromosomes 2##AK292599|SMC2|10592|structural maintenance of chromosomes 2##BC017845|SMC2|10592|structural maintenance of chromosomes 2##AF092563|SMC2|10592|structural maintenance of chromosomes 2##BC140739|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1##NM_001004485|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1##NM_001001919|OR13C4|138804|olfactory receptor, family 13, subfamily C, member 4##NM_001001961|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3##BC136949|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3##BC136952|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	0.993834	CTCF.p2:-1:0.994
chr9	139736856	139736991	reg1016673.p1	7.681	+	TSC_hg19_v1_chr9_+_139702403 BC035786 BC018960	-34508	+	TSC_hg19_v1_chr9_+_139702398 AK307431	-34526	+	TSC_hg19_v1_chr9_+_139702390 GQ169126	-34532	+	NM_001080482	1943	+	TSC_hg19_v1_chr9_+_139743239 NM_001135861 NM_014172	6324	+	TSC_hg19_v1_chr9_+_139743450 AF131857 AF285119	6571	+	BC035786|C9orf86|55684|chromosome 9 open reading frame 86##BC018960|C9orf86|55684|chromosome 9 open reading frame 86##AK307431|C9orf86|55684|chromosome 9 open reading frame 86##GQ169126|C9orf86|55684|chromosome 9 open reading frame 86##NM_001080482|C9orf172|389813|chromosome 9 open reading frame 172##NM_001135861|PHPT1|29085|phosphohistidine phosphatase 1##NM_014172|PHPT1|29085|phosphohistidine phosphatase 1##AF131857|PHPT1|29085|phosphohistidine phosphatase 1##AF285119|PHPT1|29085|phosphohistidine phosphatase 1	0.042504	
chr10	29879728	29879859	reg1020386.p1	7.680	+	BX648589 TSC_hg19_v1_chr10_-_29754623	-125242	-	BC031656 TSC_hg19_v1_chr10_+_29698527 BC063483 AL832706	-181276	+	TSC_hg19_v1_chr10_+_29698496 BC073888	-181295	+	TSC_hg19_v1_chr10_-_29923841 BC057241 BC070247	44068	-	AF109135 NM_021738 TSC_hg19_v1_chr10_-_29923901	44114	-	TSC_hg19_v1_chr10_-_30024866 AF051850 NM_003174	144971	-	BX648589|SVIL|6840|supervillin##BC031656|LOC387647|387647|patched domain containing 3 pseudogene##BC063483|LOC387647|387647|patched domain containing 3 pseudogene##AL832706|LOC387647|387647|patched domain containing 3 pseudogene##BC073888|LOC387647|387647|patched domain containing 3 pseudogene##AF109135|SVIL|6840|supervillin##NM_021738|SVIL|6840|supervillin##AF051850|SVIL|6840|supervillin##NM_003174|SVIL|6840|supervillin	0.998387	CTCF.p2:0:0.998
chr18	9612346	9612472	reg1019354.p1	7.680	+	TSC_hg19_v1_chr18_+_9475545 NM_006788 BC013126	-136812	+	TSC_hg19_v1_chr18_+_9334831 BC020490 AK315751	-277552	+	TSC_hg19_v1_chr18_+_9334800 AK027629 AK075550 NM_020648 AF196834 AJ297391	-277619	+	TSC_hg19_v1_chr18_-_9614547 AF200478 AK293869 AK292538	2095	-	AK027064 TSC_hg19_v1_chr18_-_9614566 BC060829 AK315106 AF111106 NM_001042388 NM_005134	2168	-	TSC_hg19_v1_chr18_+_9708217 AF234995 NM_006868	95800	+	NM_006788|RALBP1|10928|ralA binding protein 1##BC013126|RALBP1|10928|ralA binding protein 1##BC020490|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK315751|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK027629|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK075550|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##NM_020648|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AF196834|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AJ297391|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AF200478|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK293869|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK292538|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK027064|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##BC060829|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK315106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF111106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_001042388|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_005134|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF234995|RAB31|11031|RAB31, member RAS oncogene family##NM_006868|RAB31|11031|RAB31, member RAS oncogene family	0.730927	CTCF.p2:-1:0.731
chr19	39993567	39993673	reg1018923.p1	7.680	+	TSC_hg19_v1_chr19_+_39989603 BC000218 BC011850 DQ891847 DQ895035	-4013	+	TSC_hg19_v1_chr19_+_39989585 AK075302	-4031	+	AK308460 TSC_hg19_v1_chr19_+_39989556 NM_016941 NM_203486	-4075	+	AY324825 NM_182704 BC117331	12149	+	TSC_hg19_v1_chr19_-_40023460 BC040157 BC051333 AK096263 NM_152361 BC009725	29867	-	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	37200	-	BC000218|DLL3|10683|delta-like 3 (Drosophila)##DQ891847|DLL3|10683|delta-like 3 (Drosophila)##DQ895035|DLL3|10683|delta-like 3 (Drosophila)##AK075302|DLL3|10683|delta-like 3 (Drosophila)##AK308460|DLL3|10683|delta-like 3 (Drosophila)##NM_016941|DLL3|10683|delta-like 3 (Drosophila)##NM_203486|DLL3|10683|delta-like 3 (Drosophila)##AY324825|SELV|348303|selenoprotein V##NM_182704|SELV|348303|selenoprotein V##BC117331|SELV|348303|selenoprotein V##BC040157|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##BC051333|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##AK096263|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##NM_152361|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##BC009725|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2	0.622479	CTCF.p2:16:0.622
chr3	172428960	172429094	reg1017553.p1	7.680	+	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	-137	-	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	-187849	-	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	-262804	-	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	39497	+	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	43275	+	BC034496 AF345909 AF404758 AK093041 AX747878 NM_031955	429981	-	AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1##AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC034496|SPATA16|83893|spermatogenesis associated 16##AF345909|SPATA16|83893|spermatogenesis associated 16##AF404758|SPATA16|83893|spermatogenesis associated 16##AK093041|SPATA16|83893|spermatogenesis associated 16##NM_031955|SPATA16|83893|spermatogenesis associated 16	0.0	
chr3	36007546	36007652	reg1017144.p1	7.680	+	BC017805 NM_198399 BC066651 BC036548	-285140	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	-286403	+	BC051828 NM_016300	-323751	+	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	414453	+	NM_033403	773752	-	TSC_hg19_v1_chr3_-_36986546 NM_014831	978971	-	BC017805|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_198399|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC066651|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC036548|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain##NM_033403|DCLK3|85443|doublecortin-like kinase 3##NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1	0.068645	
chr5	112299778	112299897	reg1014648.p2	7.680	+	CU688102 AY562243 BC065926 TSC_hg19_v1_chr5_-_112257925 BC000232 M74090 AK295436 AK298268 AK299902 AK300048 AK312522 M73547 AX775929 BX648005 NM_005669	-41850	-	TSC_hg19_v1_chr5_+_112196983 AK311803 BC000186 X12791 AK313576 BC017830 BC010947 BC018669 AB587423	-102813	+	NM_001204193 NM_001204194 NM_001204196 NM_001204199 NM_003135 TSC_hg19_v1_chr5_+_112196975	-102908	+	TSC_hg19_v1_chr5_+_112312407 NM_001242377 NM_152624	12568	+	TSC_hg19_v1_chr5_+_112312506 AY135173 AY146650 BC017965 AK296361 AK090564 AX746512 BC064593 BC068042 CU687920	12691	+	M62397 AK096212 TSC_hg19_v1_chr5_-_112630346	330488	-	AY562243|REEP5|7905|receptor accessory protein 5##BC065926|REEP5|7905|receptor accessory protein 5##BC000232|REEP5|7905|receptor accessory protein 5##M74090|REEP5|7905|receptor accessory protein 5##AK295436|REEP5|7905|receptor accessory protein 5##AK298268|REEP5|7905|receptor accessory protein 5##AK299902|REEP5|7905|receptor accessory protein 5##AK312522|REEP5|7905|receptor accessory protein 5##BX648005|REEP5|7905|receptor accessory protein 5##NM_005669|REEP5|7905|receptor accessory protein 5##AK311803|SRP19|6728|signal recognition particle 19kDa##BC000186|SRP19|6728|signal recognition particle 19kDa##X12791|SRP19|6728|signal recognition particle 19kDa##BC017830|SRP19|6728|signal recognition particle 19kDa##BC010947|SRP19|6728|signal recognition particle 19kDa##BC018669|SRP19|6728|signal recognition particle 19kDa##NM_001204193|SRP19|6728|signal recognition particle 19kDa##NM_001204194|SRP19|6728|signal recognition particle 19kDa##NM_001204196|SRP19|6728|signal recognition particle 19kDa##NM_001204199|SRP19|6728|signal recognition particle 19kDa##NM_003135|SRP19|6728|signal recognition particle 19kDa##NM_001242377|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##NM_152624|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY135173|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY146650|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC017965|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK296361|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK090564|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC064593|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC068042|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##M62397|MCC|4163|mutated in colorectal cancers##AK096212|MCC|4163|mutated in colorectal cancers	0.844925	CTCF.p2:7:0.845
chr10	104356328	104356461	reg1015840.p1	7.679	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	-92575	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	-92675	+	CU674342 AM393135 DQ892689 DQ895934 AB462953 BC026016 TSC_hg19_v1_chr10_-_104262470 BC000693 Z14978 X82206 AK302072 AK312506 AK297362 AK297620 NM_005736	-93937	-	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	47890	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	117703	-	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	117951	+	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2	0.0	
chr10	67974910	67975019	reg1018477.p1	7.679	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-2693723	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-2693802	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-2693849	+	NM_178011 BX640611 AY358315 BC111492	710851	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	1450432	-	AF091606 AK313882 NM_013266	1480973	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.944614	CTCF.p2:-2:0.932
chr13	65104153	65104268	reg1017228.p1	7.679	+	AK289924 NM_022843	-3114556	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-3114957	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-4132731	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	2700294	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	5578331	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	7336049	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.065063	
chr5	146956646	146956746	reg1015488.p2	7.679	+	BC077077 NM_001197294 TSC_hg19_v1_chr5_-_146889632	-67070	-	EU007906 CU687310 EU832163 EU832257 TSC_hg19_v1_chr5_-_146889506	-67230	-	CU691634 AB384367 EU832180 EU832273 TSC_hg19_v1_chr5_-_146833229 BC039006 D78014 AK297223 NM_001387 Y07818	-123431	-	BC003189 AB011127 TSC_hg19_v1_chr5_-_147162128 AK291280	205398	-	BC017354 TSC_hg19_v1_chr5_-_147162218	205507	-	AF273057 NM_014790 TSC_hg19_v1_chr5_-_147162254	205558	-	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3##EU007906|DPYSL3|1809|dihydropyrimidinase-like 3##EU832163|DPYSL3|1809|dihydropyrimidinase-like 3##EU832257|DPYSL3|1809|dihydropyrimidinase-like 3##EU832180|DPYSL3|1809|dihydropyrimidinase-like 3##EU832273|DPYSL3|1809|dihydropyrimidinase-like 3##BC039006|DPYSL3|1809|dihydropyrimidinase-like 3##D78014|DPYSL3|1809|dihydropyrimidinase-like 3##AK297223|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3##Y07818|DPYSL3|1809|dihydropyrimidinase-like 3##BC003189|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AB011127|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AK291280|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##BC017354|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AF273057|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##NM_014790|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	0.0	
chr18	41678599	41678723	reg1015117.p1	7.678	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-821232	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-983092	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-2143428	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	581453	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	582207	+	NM_001242692 AK292422	1114291	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.358527	CTCF.p2:0:0.359
chr5	156898864	156898987	reg1016748.p1	7.678	+	TSC_hg19_v1_chr5_+_156887210 AK026158 AK308830 AK309242	-11655	+	AK296972 NM_001099287 NM_001172292	-11899	+	TSC_hg19_v1_chr5_+_156820161 AK172724	-78737	+	AB462931 TSC_hg19_v1_chr5_-_157002728	103791	-	AF311317 AF326918 TSC_hg19_v1_chr5_-_157002784 Y13786 AK091464 AK308182 AX747000 NM_033274	103880	-	AB527685 TSC_hg19_v1_chr5_-_157079170	180203	-	AK026158|NIPAL4|348938|NIPA-like domain containing 4##AK308830|NIPAL4|348938|NIPA-like domain containing 4##AK309242|NIPAL4|348938|NIPA-like domain containing 4##AK296972|NIPAL4|348938|NIPA-like domain containing 4##NM_001099287|NIPAL4|348938|NIPA-like domain containing 4##NM_001172292|NIPAL4|348938|NIPA-like domain containing 4##AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF311317|ADAM19|8728|ADAM metallopeptidase domain 19##AF326918|ADAM19|8728|ADAM metallopeptidase domain 19##Y13786|ADAM19|8728|ADAM metallopeptidase domain 19##AK091464|ADAM19|8728|ADAM metallopeptidase domain 19##AK308182|ADAM19|8728|ADAM metallopeptidase domain 19##NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19	0.993876	CTCF.p2:5:0.994
chr6	127125510	127125665	reg1017381.p1	7.678	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	-464317	+	TSC_hg19_v1_chr6_+_126307685 AK308651	-817924	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	-817985	+	TSC_hg19_v1_chr6_+_127439818 BC022367	314224	+	NM_032784 AF251057	314464	+	NM_001242851 NM_001242844 NM_001242849 NM_001242852 TSC_hg19_v1_chr6_+_127587982 NM_001242845 NM_001242846 NM_001242850 NM_030963	462317	+	BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC022367|RSPO3|84870|R-spondin 3##NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3##NM_001242851|RNF146|81847|ring finger protein 146##NM_001242844|RNF146|81847|ring finger protein 146##NM_001242849|RNF146|81847|ring finger protein 146##NM_001242852|RNF146|81847|ring finger protein 146##NM_001242845|RNF146|81847|ring finger protein 146##NM_001242846|RNF146|81847|ring finger protein 146##NM_001242850|RNF146|81847|ring finger protein 146##NM_030963|RNF146|81847|ring finger protein 146	0.993214	CTCF.p2:-8:0.993
chr10	76990447	76990564	reg1018122.p1	7.677	+	BC012883 L08666 TSC_hg19_v1_chr10_+_76970608	-19895	+	TSC_hg19_v1_chr10_+_76970563 BC000165 BC072407 AK315919 AK296635	-19951	+	NM_001184783 NM_003375	-20206	+	TSC_hg19_v1_chr10_-_76995794 CU690500 BC023663 AK302283 AK074421 AY358476 BC047774 NM_144589 AK290452	5266	-	TSC_hg19_v1_chr10_-_77159861 AK092897 AX747796	169440	-	AK127647 TSC_hg19_v1_chr10_-_77160688	170165	-	BC012883|VDAC2|7417|voltage-dependent anion channel 2##L08666|VDAC2|7417|voltage-dependent anion channel 2##BC000165|VDAC2|7417|voltage-dependent anion channel 2##BC072407|VDAC2|7417|voltage-dependent anion channel 2##AK315919|VDAC2|7417|voltage-dependent anion channel 2##AK296635|VDAC2|7417|voltage-dependent anion channel 2##NM_001184783|VDAC2|7417|voltage-dependent anion channel 2##NM_003375|VDAC2|7417|voltage-dependent anion channel 2##BC023663|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK302283|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK074421|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AY358476|COMTD1|118881|catechol-O-methyltransferase domain containing 1##BC047774|COMTD1|118881|catechol-O-methyltransferase domain containing 1##NM_144589|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK290452|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK092897|ZNF503|84858|zinc finger protein 503##AK127647|ZNF503|84858|zinc finger protein 503	0.998987	CTCF.p2:8:0.999
chr16	22110439	22110546	reg1017045.p1	7.677	+	AK098260 AK128606 AK307544 NM_173615	-6631	+	TSC_hg19_v1_chr16_+_22019464 NM_001164579 BC027604 BC053950	-91004	+	BC039562 BC021724 BC028605 NM_173806	-98064	-	TSC_hg19_v1_chr16_+_22217630 NM_013302 AK308757 BC032665	107181	+	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	198256	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	275303	-	AK098260|VWA3A|146177|von Willebrand factor A domain containing 3A##AK128606|VWA3A|146177|von Willebrand factor A domain containing 3A##AK307544|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_173615|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_001164579|C16orf52|730094|chromosome 16 open reading frame 52##BC027604|C16orf52|730094|chromosome 16 open reading frame 52##BC053950|C16orf52|730094|chromosome 16 open reading frame 52##BC039562|PDZD9|255762|PDZ domain containing 9##BC021724|PDZD9|255762|PDZ domain containing 9##BC028605|PDZD9|255762|PDZ domain containing 9##NM_173806|PDZD9|255762|PDZ domain containing 9##NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase##BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	0.855839	CTCF.p2:5:0.856
chr17	55860757	55860873	reg1018327.p1	7.676	+	AK093888 AX748353 NM_170721	-526442	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-526842	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-697672	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	66589	-	AK000746 NM_017949	119934	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	171861	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.954755	CTCF.p2:-2:0.955
chr2	60869576	60869677	reg1016860.p1	7.676	+	AF080216 TSC_hg19_v1_chr2_-_60780784	-88848	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	-89104	-	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2401144	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	113858	+	TSC_hg19_v1_chr2_+_61108702 AK303926	239079	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	239111	+	AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)	0.999069	CTCF.p2:0:0.999
chr14	57126813	57126916	reg1018059.p1	7.675	+	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	-80319	+	TSC_hg19_v1_chr14_+_56585163 AF302502	-541690	+	TSC_hg19_v1_chr14_+_56585131 BC009476 NM_021255 AK315727	-541870	+	NM_172337 AB593056	145499	-	AK314271 BC032579 NM_021728 AB593058	150280	-	CU691962 TSC_hg19_v1_chr14_-_57735388	608529	-	AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101##AF302502|PELI2|57161|pellino homolog 2 (Drosophila)##BC009476|PELI2|57161|pellino homolog 2 (Drosophila)##NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)##AK315727|PELI2|57161|pellino homolog 2 (Drosophila)##NM_172337|OTX2|5015|orthodenticle homeobox 2##AB593056|OTX2|5015|orthodenticle homeobox 2##AK314271|OTX2|5015|orthodenticle homeobox 2##BC032579|OTX2|5015|orthodenticle homeobox 2##NM_021728|OTX2|5015|orthodenticle homeobox 2##AB593058|OTX2|5015|orthodenticle homeobox 2	0.862369	CTCF.p2:-2:0.862
chr5	1209170	1209277	reg1017196.p2	7.675	+	AK096054 AK290811 NM_001003841 BC146290 BC148801 AB527217 AY591756 AY596807	-7486	+	CU675797 AF105365 TSC_hg19_v1_chr5_-_1112151 AK302856 BC098390 BC007760 BC018982 NM_006598	-97066	-	TSC_hg19_v1_chr5_+_1008916 BC012176 AF358137 AB062887 NM_033120	-200190	+	AK055798 NM_182632 AK298257 BC056757	16267	+	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	85868	-	AB045223 DQ892147 DQ895343 AK027306 BC025305 NM_030782 TSC_hg19_v1_chr5_-_1345095	135799	-	AK096054|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK290811|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##NM_001003841|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC146290|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC148801|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY591756|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY596807|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AF105365|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK302856|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC098390|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC007760|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC018982|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##NM_006598|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC012176|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF358137|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AB062887|NKD2|85409|naked cuticle homolog 2 (Drosophila)##NM_033120|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AK055798|SLC6A18|348932|solute carrier family 6, member 18##NM_182632|SLC6A18|348932|solute carrier family 6, member 18##AK298257|SLC6A18|348932|solute carrier family 6, member 18##BC056757|SLC6A18|348932|solute carrier family 6, member 18##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase##AB045223|CLPTM1L|81037|CLPTM1-like##DQ892147|CLPTM1L|81037|CLPTM1-like##DQ895343|CLPTM1L|81037|CLPTM1-like##AK027306|CLPTM1L|81037|CLPTM1-like##BC025305|CLPTM1L|81037|CLPTM1-like##NM_030782|CLPTM1L|81037|CLPTM1-like	1.80982	CTCF.p2:-9:0.843	CTCF.p2:105:0.967
chr11	75308820	75308921	reg1015151.p1	7.674	+	TSC_hg19_v1_chr11_+_75273296 AK297811 AK130870 AK309905 BC070087 BC014623 D83174 AY264853 BC036298 AK122936	-35541	+	NM_001207014 NM_001235 TSC_hg19_v1_chr11_+_75273168 AK290124	-35735	+	AF318377 TSC_hg19_v1_chr11_-_75236890	-71992	-	TSC_hg19_v1_chr11_-_75379154 BC063860 BC041411	70285	-	AB527183 BC139780 AB058781 BC150254 NM_033063 NM_207577	70576	-	AK123340 TSC_hg19_v1_chr11_-_75379695	70804	-	AK297811|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK130870|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK309905|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC070087|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC014623|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##D83174|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AY264853|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC036298|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK122936|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##NM_001207014|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##NM_001235|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK290124|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AF318377|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##BC063860|MAP6|4135|microtubule-associated protein 6##BC041411|MAP6|4135|microtubule-associated protein 6##BC139780|MAP6|4135|microtubule-associated protein 6##AB058781|MAP6|4135|microtubule-associated protein 6##BC150254|MAP6|4135|microtubule-associated protein 6##NM_033063|MAP6|4135|microtubule-associated protein 6##NM_207577|MAP6|4135|microtubule-associated protein 6##AK123340|MAP6|4135|microtubule-associated protein 6	0.762148	CTCF.p2:7:0.762
chr1	55844295	55844439	reg1015239.p1	7.674	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-163283	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-163331	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-339143	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	1200652	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	1200763	-	AK312439 TSC_hg19_v1_chr1_-_57045216	1200850	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.011764	
chr6_dbb_hap3	2090524	2090596	reg1016911.p1	7.674	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.919605	CTCF.p2:-44:0.920
chr7	33090452	33090599	reg1017708.p2	7.673	+	BC015856 NM_001166118 NM_016489	-10006	-	TSC_hg19_v1_chr7_+_32997051 NM_007270 AK075331 AK128597 AK300328 AK293954 AK294266 BC101723 BC112053 AF089745	-93373	+	AF274938 TSC_hg19_v1_chr7_-_32982789 BC050570 BC036907	-107821	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	11797	-	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	58452	-	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	78556	+	BC015856|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001166118|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_016489|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_007270|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK075331|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK128597|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK300328|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK293954|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK294266|FKBP9|11328|FK506 binding protein 9, 63 kDa##BC101723|FKBP9|11328|FK506 binding protein 9, 63 kDa##BC112053|FKBP9|11328|FK506 binding protein 9, 63 kDa##AF089745|FKBP9|11328|FK506 binding protein 9, 63 kDa##AF274938|RP9P|441212|retinitis pigmentosa 9 pseudogene##BC050570|RP9P|441212|retinitis pigmentosa 9 pseudogene##BC036907|RP9P|441212|retinitis pigmentosa 9 pseudogene##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9	0.906665	CTCF.p2:8:0.907
chr12	10826863	10826997	reg1017026.p2	7.672	+	AF251059 NM_018423	-40	-	AB528590 TSC_hg19_v1_chr12_-_10766200 BC010905 AK022720 AK001154 BC000928 AK096106 AF165518 NM_018048	-60761	-	BC012550 NM_213657 NM_213658 AK310992	-219682	-	TSC_hg19_v1_chr12_-_10875782 AB463536 DQ892686 DQ895930	48812	-	TSC_hg19_v1_chr12_-_10875923 X95325 BC015913 BC015564 BC021926 BC009744 M24069 BC008801 X72712 AK314846 NM_001145426 NM_003651	48971	-	BC069091 AB529261 BC093992 BC113561 NM_023919	128266	-	AF251059|STYK1|55359|serine/threonine/tyrosine kinase 1##NM_018423|STYK1|55359|serine/threonine/tyrosine kinase 1##BC010905|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK022720|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK001154|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK096106|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AF165518|MAGOHB|55110|mago-nashi homolog B (Drosophila)##NM_018048|MAGOHB|55110|mago-nashi homolog B (Drosophila)##BC012550|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_213657|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_213658|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##AK310992|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##DQ892686|CSDA|8531|cold shock domain protein A##DQ895930|CSDA|8531|cold shock domain protein A##X95325|CSDA|8531|cold shock domain protein A##BC015913|CSDA|8531|cold shock domain protein A##BC015564|CSDA|8531|cold shock domain protein A##BC021926|CSDA|8531|cold shock domain protein A##BC009744|CSDA|8531|cold shock domain protein A##M24069|CSDA|8531|cold shock domain protein A##BC008801|CSDA|8531|cold shock domain protein A##X72712|CSDA|8531|cold shock domain protein A##AK314846|CSDA|8531|cold shock domain protein A##NM_001145426|CSDA|8531|cold shock domain protein A##NM_003651|CSDA|8531|cold shock domain protein A##BC069091|TAS2R7|50837|taste receptor, type 2, member 7##BC093992|TAS2R7|50837|taste receptor, type 2, member 7##BC113561|TAS2R7|50837|taste receptor, type 2, member 7##NM_023919|TAS2R7|50837|taste receptor, type 2, member 7	0.068249	
chr2	182438016	182438148	reg1019751.p1	7.672	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	-115760	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	-116032	+	NM_000885	-116464	+	AJ697855 AJ697856 AY357073 AY690329 AY690330 AY690331 AY690332 AY690333 AJ640141 AJ697858 BC137498 BC137499 AK293844 NM_001030311 NM_001030312 NM_001030313 NM_001160277 NM_201548 TSC_hg19_v1_chr2_-_182521833 HQ426666 HQ426667 HQ426668 HQ426669 HQ426670	83709	-	BC009046 TSC_hg19_v1_chr2_-_182545243 AB593068 AB593070 AB593071 AK313799 AB593069 D82347 HQ426678 JF290420 NM_002500	107219	-	TSC_hg19_v1_chr2_+_182756494 NM_001130445 NM_006751 AK093143 AX747951 AB067514	318449	+	X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ697855|CERKL|375298|ceramide kinase-like##AJ697856|CERKL|375298|ceramide kinase-like##AY357073|CERKL|375298|ceramide kinase-like##AY690329|CERKL|375298|ceramide kinase-like##AY690330|CERKL|375298|ceramide kinase-like##AY690331|CERKL|375298|ceramide kinase-like##AY690332|CERKL|375298|ceramide kinase-like##AY690333|CERKL|375298|ceramide kinase-like##AJ640141|CERKL|375298|ceramide kinase-like##AJ697858|CERKL|375298|ceramide kinase-like##BC137498|CERKL|375298|ceramide kinase-like##BC137499|CERKL|375298|ceramide kinase-like##AK293844|CERKL|375298|ceramide kinase-like##NM_001030311|CERKL|375298|ceramide kinase-like##NM_001030312|CERKL|375298|ceramide kinase-like##NM_001030313|CERKL|375298|ceramide kinase-like##NM_001160277|CERKL|375298|ceramide kinase-like##NM_201548|CERKL|375298|ceramide kinase-like##HQ426667|CERKL|375298|ceramide kinase-like##BC009046|NEUROD1|4760|neurogenic differentiation 1##AB593068|NEUROD1|4760|neurogenic differentiation 1##AB593070|NEUROD1|4760|neurogenic differentiation 1##AB593071|NEUROD1|4760|neurogenic differentiation 1##AK313799|NEUROD1|4760|neurogenic differentiation 1##AB593069|NEUROD1|4760|neurogenic differentiation 1##D82347|NEUROD1|4760|neurogenic differentiation 1##HQ426678|CERKL|375298|ceramide kinase-like##JF290420|CERKL|375298|ceramide kinase-like##NM_002500|NEUROD1|4760|neurogenic differentiation 1##NM_001130445|SSFA2|6744|sperm specific antigen 2##NM_006751|SSFA2|6744|sperm specific antigen 2##AB067514|SSFA2|6744|sperm specific antigen 2	0.937243	CTCF.p2:-14:0.937
chr10	78392573	78392698	reg1016334.p2	7.671	+	AF267860 NM_032024	-850117	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1231070	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1231154	-	AF118141 TSC_hg19_v1_chr10_-_79397246	1004590	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	1004701	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	1004771	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	1.021676	CTCF.p2:-7:0.982
chr7	135357692	135357810	reg1017922.p2	7.671	+	TSC_hg19_v1_chr7_+_135347230 NM_001130929 BC063529 BC073942 BC021734 BC107765 BC047474 BC016741 BC040872	-10490	+	TSC_hg19_v1_chr7_+_135242675 NM_015135 BC136624 AK297307 BC146784 D86978	-115063	+	BC035590 U71267 U71268 AL389980 TSC_hg19_v1_chr7_-_135194851 AK314540 AK074493 AK300365 NM_001008225 NM_001190847 NM_001190848 NM_001190849 NM_001190850 NM_013316	-162891	-	AF169301 NM_012450 BC030689 TSC_hg19_v1_chr7_-_135412940 AB208809	55185	-	BC137311 BC137312 AK297754 AY358803 AK290250 AK310180 NM_205855	75728	-	AF130088 TSC_hg19_v1_chr7_-_135613232	255469	-	NM_001130929|C7orf73|647087|chromosome 7 open reading frame 73##BC063529|C7orf73|647087|chromosome 7 open reading frame 73##BC073942|C7orf73|647087|chromosome 7 open reading frame 73##BC021734|C7orf73|647087|chromosome 7 open reading frame 73##BC107765|C7orf73|647087|chromosome 7 open reading frame 73##BC047474|C7orf73|647087|chromosome 7 open reading frame 73##BC016741|C7orf73|647087|chromosome 7 open reading frame 73##BC040872|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##NM_015135|NUP205|23165|nucleoporin 205kDa##BC136624|NUP205|23165|nucleoporin 205kDa##AK297307|NUP205|23165|nucleoporin 205kDa##BC146784|NUP205|23165|nucleoporin 205kDa##D86978|NUP205|23165|nucleoporin 205kDa##BC035590|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71267|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71268|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AL389980|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK314540|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK074493|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK300365|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001008225|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190847|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190848|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190849|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190850|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_013316|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AF169301|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##NM_012450|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##BC030689|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##AB208809|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##BC137311|FAM180A|389558|family with sequence similarity 180, member A##BC137312|FAM180A|389558|family with sequence similarity 180, member A##AK297754|FAM180A|389558|family with sequence similarity 180, member A##AY358803|FAM180A|389558|family with sequence similarity 180, member A##AK290250|FAM180A|389558|family with sequence similarity 180, member A##AK310180|FAM180A|389558|family with sequence similarity 180, member A##NM_205855|FAM180A|389558|family with sequence similarity 180, member A##AF130088|LUZP6|767558|leucine zipper protein 6	0.983825	CTCF.p2:3:0.984
chr9	90427892	90428026	reg1019816.p1	7.671	+	TSC_hg19_v1_chr9_+_90341123 BC012612	-86815	+	AL832167 BX647102 BX647434 TSC_hg19_v1_chr9_+_90341033 BX537395 BX647101 BX647413 BX647435 BX648849 BX649140 X12451 AF304301 BC142983 AF217997	-86919	+	AK075100 TSC_hg19_v1_chr9_+_90341022 BX648848	-86937	+	AK093206 AX747990 AK125845 NM_178828 BC137349	69798	+	NM_001145124 AK310310	104919	+	AY904367 AX810715 BC002655 AX810688 AK298993 TSC_hg19_v1_chr9_-_90589450 AK296328 AK075325 AK294193 AK226135	161450	-	BC012612|CTSL1|1514|cathepsin L1##AL832167|CTSL1|1514|cathepsin L1##BX647102|CTSL1|1514|cathepsin L1##BX647434|CTSL1|1514|cathepsin L1##BX537395|CTSL1|1514|cathepsin L1##BX647101|CTSL1|1514|cathepsin L1##BX647413|CTSL1|1514|cathepsin L1##BX647435|CTSL1|1514|cathepsin L1##BX648849|CTSL1|1514|cathepsin L1##BX649140|CTSL1|1514|cathepsin L1##X12451|CTSL1|1514|cathepsin L1##AF304301|CTSL1|1514|cathepsin L1##BC142983|CTSL1|1514|cathepsin L1##AF217997|CTSL1|1514|cathepsin L1##AK075100|CTSL1|1514|cathepsin L1##BX648848|CTSL1|1514|cathepsin L1##AK093206|C9orf79|286234|chromosome 9 open reading frame 79##AK125845|C9orf79|286234|chromosome 9 open reading frame 79##NM_178828|C9orf79|286234|chromosome 9 open reading frame 79##BC137349|C9orf79|286234|chromosome 9 open reading frame 79##NM_001145124|FAM75C1|441452|family with sequence similarity 75, member C1##AY904367|CDK20|23552|cyclin-dependent kinase 20##BC002655|CDK20|23552|cyclin-dependent kinase 20##AK298993|CDK20|23552|cyclin-dependent kinase 20##AK296328|CDK20|23552|cyclin-dependent kinase 20##AK075325|CDK20|23552|cyclin-dependent kinase 20##AK294193|CDK20|23552|cyclin-dependent kinase 20##AK226135|CDK20|23552|cyclin-dependent kinase 20	0.0	
chr15	35000674	35000803	reg1017251.p1	7.670	+	BX647673 TSC_hg19_v1_chr15_-_34875067	-125669	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_001023567	-172572	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_181077	-318793	-	BC069131 BC069339 NM_020660 BC112110 BC112114 BC143788	45996	-	AK129892 AK056592 AK129902 AK290616 TSC_hg19_v1_chr15_-_35087751 BC009978 NM_005159	87099	-	AB384497 AK291615 BC127111 BC127112 TSC_hg19_v1_chr15_-_35261899 AB011132 AK315815 BX647820 EF553519 NM_014691	261189	-	BX647673|GOLGA8B|440270|golgin A8 family, member B##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_001023567|GOLGA8B|440270|golgin A8 family, member B##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_181077|GOLGA8A|23015|golgin A8 family, member A##BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa##BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa##NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa##BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa##AK129892|ACTC1|70|actin, alpha, cardiac muscle 1##AK056592|ACTC1|70|actin, alpha, cardiac muscle 1##AK129902|ACTC1|70|actin, alpha, cardiac muscle 1##AK290616|ACTC1|70|actin, alpha, cardiac muscle 1##BC009978|ACTC1|70|actin, alpha, cardiac muscle 1##NM_005159|ACTC1|70|actin, alpha, cardiac muscle 1##AK291615|AQR|9716|aquarius homolog (mouse)##BC127111|AQR|9716|aquarius homolog (mouse)##BC127112|AQR|9716|aquarius homolog (mouse)##AB011132|AQR|9716|aquarius homolog (mouse)##AK315815|AQR|9716|aquarius homolog (mouse)##BX647820|AQR|9716|aquarius homolog (mouse)##EF553519|AQR|9716|aquarius homolog (mouse)##NM_014691|AQR|9716|aquarius homolog (mouse)	0.07696	
chr6	123190720	123190834	reg1018476.p2	7.670	+	TSC_hg19_v1_chr6_+_123110402 AK000184 BC018999 BC066591 AK301365 DQ892207 DQ895402 CU676352	-80360	+	NM_006714	-80807	+	AK311867 TSC_hg19_v1_chr6_+_123100861 AK289836 AK307272 AJ002962 AB208815 U51338 D50373 D88648 AL512688 U81235 CR457057 DQ891437 DQ894613 EU176601	-89878	+	TSC_hg19_v1_chr6_+_123317379 AK295158	126606	+	BC101377 BC101376 NM_001010852	126803	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	767312	-	AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK311867|FABP7|2173|fatty acid binding protein 7, brain##AK289836|FABP7|2173|fatty acid binding protein 7, brain##AJ002962|FABP7|2173|fatty acid binding protein 7, brain##U51338|FABP7|2173|fatty acid binding protein 7, brain##D50373|FABP7|2173|fatty acid binding protein 7, brain##D88648|FABP7|2173|fatty acid binding protein 7, brain##AL512688|FABP7|2173|fatty acid binding protein 7, brain##U81235|FABP7|2173|fatty acid binding protein 7, brain##CR457057|FABP7|2173|fatty acid binding protein 7, brain##DQ891437|FABP7|2173|fatty acid binding protein 7, brain##DQ894613|FABP7|2173|fatty acid binding protein 7, brain##EU176601|FABP7|2173|fatty acid binding protein 7, brain##AK295158|CLVS2|134829|clavesin 2##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin	0.602238	CTCF.p2:-10:0.602
chr8	11872658	11872838	reg1017830.p2	7.670	+	AY621331 DQ012024 NM_001033019 BC130461 BC130463	-18959	-	AY621332 DQ012025 NM_001033017	-32919	+	AY621333 DQ012026 NM_001033018	-40641	-	DQ012022 NM_001037804 NM_001195257	56507	-	BC110823 NM_001039615	74098	+	AY509884 NM_201402	123520	-	AY621331|DEFB134|613211|defensin, beta 134##DQ012024|DEFB134|613211|defensin, beta 134##NM_001033019|DEFB134|613211|defensin, beta 134##BC130461|DEFB134|613211|defensin, beta 134##BC130463|DEFB134|613211|defensin, beta 134##AY621332|DEFB135|613209|defensin, beta 135##DQ012025|DEFB135|613209|defensin, beta 135##NM_001033017|DEFB135|613209|defensin, beta 135##AY621333|DEFB136|613210|defensin, beta 136##DQ012026|DEFB136|613210|defensin, beta 136##NM_001033018|DEFB136|613210|defensin, beta 136##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##BC110823|ZNF705D|728957|zinc finger protein 705D##NM_001039615|ZNF705D|728957|zinc finger protein 705D##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##NM_201402|USP17L2|377630|ubiquitin specific peptidase 17-like 2	0.971775	CTCF.p2:-16:0.972
chr12	54997109	54997220	reg1017242.p2	7.669	+	CR457003 AY063766 U48707 TSC_hg19_v1_chr12_-_54982398 BC022470 NM_006741 AK123969	-14800	-	TSC_hg19_v1_chr12_+_54955248 BX538092 NM_001165975 AK302931 AK126899 AJ401609	-41867	+	TSC_hg19_v1_chr12_+_54943386 BC032226 AB209200 AK302899 U86078	-53754	+	CU686745 CU687522 AF238867 BC069317 NM_033277 BC062217	31487	-	AY590150 AF144011 BC062682 BC069108 NM_053283 EF503687 EF503688 EF503689	45041	-	NM_058173 AF414087 AY359062 BC111421 AY651259	251168	+	CR457003|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AY063766|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##U48707|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##BC022470|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_006741|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AK123969|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##BX538092|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##NM_001165975|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AK302931|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AK126899|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AJ401609|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##BC032226|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AB209200|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AK302899|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##U86078|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AF238867|LACRT|90070|lacritin##BC069317|LACRT|90070|lacritin##NM_033277|LACRT|90070|lacritin##BC062217|LACRT|90070|lacritin##AY590150|DCD|117159|dermcidin##AF144011|DCD|117159|dermcidin##BC062682|DCD|117159|dermcidin##BC069108|DCD|117159|dermcidin##NM_053283|DCD|117159|dermcidin##EF503687|DCD|117159|dermcidin##EF503688|DCD|117159|dermcidin##EF503689|DCD|117159|dermcidin##NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1	0.063946	
chr13	73217685	73217786	reg1017628.p2	7.669	+	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	-776301	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	-776972	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	-777476	-	TSC_hg19_v1_chr13_-_73301768 BC062361 BC013405 BC080523 AK025522 BC125183 NM_001071775	84096	-	EU834129 TSC_hg19_v1_chr13_+_73302063 AK300758 BX648605 NM_024808 AK298608 AK291496 BC056876 BC025367 EU832508 EU832589	84349	+	AB385417 TSC_hg19_v1_chr13_-_73355994 AB001743 AF330044	138252	-	AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##BC062361|MZT1|440145|mitotic spindle organizing protein 1##BC013405|MZT1|440145|mitotic spindle organizing protein 1##BC080523|MZT1|440145|mitotic spindle organizing protein 1##AK025522|MZT1|440145|mitotic spindle organizing protein 1##BC125183|MZT1|440145|mitotic spindle organizing protein 1##NM_001071775|MZT1|440145|mitotic spindle organizing protein 1##EU834129|BORA|79866|bora, aurora kinase A activator##AK300758|BORA|79866|bora, aurora kinase A activator##BX648605|BORA|79866|bora, aurora kinase A activator##NM_024808|BORA|79866|bora, aurora kinase A activator##AK298608|BORA|79866|bora, aurora kinase A activator##AK291496|BORA|79866|bora, aurora kinase A activator##BC056876|BORA|79866|bora, aurora kinase A activator##BC025367|BORA|79866|bora, aurora kinase A activator##EU832508|BORA|79866|bora, aurora kinase A activator##EU832589|BORA|79866|bora, aurora kinase A activator##AB001743|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AF330044|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)	0.973415	CTCF.p2:3:0.973
chr14	107239661	107239840	reg1008568.p4	7.669	+	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	-20752	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	-28449	-	JF810265 DQ454799 FJ840007 FJ840015 DQ454561 DQ454955 DQ454612 DQ454663 DQ454685 FJ840092 FJ840295 FJ873837 AJ008218 JF810272 JF810273 AY003862 AJ132562 Y08732 AF103327 EU099062 EU620029 GQ504979 HQ392897 AF103116 AF103087 AF103100 HM774925 JN110942 HM774229 FJ385350 GQ504960 HM774112 HM774402 HM774448 HM774462 HM774524 HM774766 HM775010 AF103135 HM774927 HM774932 HM774189 U00529 Y14940 AF103057 AF103351 EU146338 L03141 L03153 AF029328 AF485459 DQ431489 L03143 L03173 L03177 AF035801 AY423195 AY423198 AY423206 DQ431488 DQ431492 HM995020 DQ431490 GU570297 HM152513 HM994969 HM994972 HM994977 HM994978 HM994981 HM994982 HM994989 HM995522 HM995532 HM996141 HM996526 DQ187603 DQ187629 DQ322887 DQ322888 DQ322889 DQ322890 DQ322960 DQ840663 DQ840674 DQ840675 DQ840677 DQ840678 DQ840680 DQ840681 DQ840682 DQ840683 DQ840687 DQ840758 DQ840769 DQ840770 DQ840771 DQ840773 DQ840781 DQ840844 DQ840857 DQ840859 DQ840860 DQ840863 DQ840910 DQ840917 DQ840918 AF021973 AF048774 AF115122 AF151702 AF174111 AJ238039 AJ579199 AJ579279 AY866726 AY866767 DQ100754 DQ100773 DQ100787 DQ100849 DQ100977 DQ840729 DQ926055 DQ926218 DQ926255 DQ926308 EF177956 EF178021 GQ267831 U96395 X99352 Y17142 AB063699 AB063849 AB063916 AB067258 AB363156 AF021945 AF129753 AF471200 AF471528 AF471540 AF471541 AF471542 AF471546 AJ300788 AJ389185 AJ556647 AJ556667 AJ579161 AY554174 AY554177 AY554178 AY573190 AY640527 AY640562 AY846273 AY971106 D83679 DQ065693 DQ535269 DQ535318 DQ535335 DQ535453 DQ535464 DQ535482 DQ926153 DQ926492 EF178117 EF178127 EF178131 EU835555 FJ195515 FJ492899 FN563769 GU570345 GU570350 HQ378386 JF806284 U97244 X99353 L33033 Z11950 BC033178 TSC_hg19_v1_chr14_-_107199472	-40450	-	DQ205161 AY392971 AF085654 X58399 X58398 BC002792 TSC_hg19_v1_chr14_-_107259820	19970	-	None	None	None	None	None	None	Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC033178|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##X58399|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##X58398|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##BC002792|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)	3.847593	CTCF.p2:15:0.988	CTCF.p2:54:0.999	CTCF.p2:-80:0.999	CTCF.p2:94:0.862
chr18	68122072	68122198	reg1017904.p1	7.669	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-165874	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-165968	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-249197	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	2088640	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	2089595	-	AF448839 NM_138999	2410798	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.995135	CTCF.p2:10:0.995
chr3	111258680	111258815	reg1017740.p2	7.669	+	TSC_hg19_v1_chr3_+_110790825 AF282874 AK075105 NM_001243288	-467853	+	TSC_hg19_v1_chr3_+_110790671 BC067808	-468046	+	TSC_hg19_v1_chr3_+_110790623 NM_001243286 NM_015480	-468200	+	NM_005816 NM_198196 TSC_hg19_v1_chr3_+_111260970 BC020749 BC027914	2219	+	AK290719 AK315237 TSC_hg19_v1_chr3_+_111261063 AL833681 CU676690	2320	+	NM_024508	55434	-	AF282874|PVRL3|25945|poliovirus receptor-related 3##AK075105|PVRL3|25945|poliovirus receptor-related 3##NM_001243288|PVRL3|25945|poliovirus receptor-related 3##BC067808|PVRL3|25945|poliovirus receptor-related 3##NM_001243286|PVRL3|25945|poliovirus receptor-related 3##NM_015480|PVRL3|25945|poliovirus receptor-related 3##NM_005816|CD96|10225|CD96 molecule##NM_198196|CD96|10225|CD96 molecule##BC020749|CD96|10225|CD96 molecule##BC027914|CD96|10225|CD96 molecule##AK290719|CD96|10225|CD96 molecule##AK315237|CD96|10225|CD96 molecule##AL833681|CD96|10225|CD96 molecule##NM_024508|ZBED2|79413|zinc finger, BED-type containing 2	0.80721	CTCF.p2:6:0.807
chr19	39047539	39047650	reg1017954.p1	7.668	+	TSC_hg19_v1_chr19_+_38924330 NM_000540 NM_001042723 J05200	-123250	+	AF448437 BC146669 BC150202 BC142721 BC151216 TSC_hg19_v1_chr19_-_38916860 AX721071 AY048119 AY048120 AY048121 FJ768677 FJ768678 FJ768679 FJ768680 FJ768681 FJ768682 NM_001146202 NM_001146203 NM_001146204 NM_001146205 NM_001146206 NM_001146207 NM_170604	-130722	-	TSC_hg19_v1_chr19_+_38893839 BC080606 AK128745	-153693	+	AB527182 TSC_hg19_v1_chr19_-_39108593 NM_001042600 NM_007181	60994	-	TSC_hg19_v1_chr19_+_39109725 NM_013234 AF077051 AF085358 AB019392 AY245432	62119	+	TSC_hg19_v1_chr19_+_39109825 BC007559 AK298635	62222	+	NM_000540|RYR1|6261|ryanodine receptor 1 (skeletal)##NM_001042723|RYR1|6261|ryanodine receptor 1 (skeletal)##J05200|RYR1|6261|ryanodine receptor 1 (skeletal)##AF448437|RASGRP4|115727|RAS guanyl releasing protein 4##BC146669|RASGRP4|115727|RAS guanyl releasing protein 4##BC150202|RASGRP4|115727|RAS guanyl releasing protein 4##BC142721|RASGRP4|115727|RAS guanyl releasing protein 4##BC151216|RASGRP4|115727|RAS guanyl releasing protein 4##AY048119|RASGRP4|115727|RAS guanyl releasing protein 4##AY048120|RASGRP4|115727|RAS guanyl releasing protein 4##AY048121|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768677|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768678|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768679|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768680|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768681|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768682|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146202|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146203|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146204|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146205|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146206|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146207|RASGRP4|115727|RAS guanyl releasing protein 4##NM_170604|RASGRP4|115727|RAS guanyl releasing protein 4##BC080606|FAM98C|147965|family with sequence similarity 98, member C##AK128745|FAM98C|147965|family with sequence similarity 98, member C##NM_001042600|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_007181|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_013234|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF077051|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF085358|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AB019392|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AY245432|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##BC007559|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK298635|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K	0.633564	CTCF.p2:1:0.538
chr4	188527781	188527907	reg1018653.p1	7.668	+	TSC_hg19_v1_chr4_-_187647851 AK307938	-880039	-	TSC_hg19_v1_chr4_-_187644994 NM_005245 X87241	-882853	-	TSC_hg19_v1_chr4_-_187527219 BC172774	-1000562	-	AK056719 AY429593 NM_174900	389080	+	BC111959 BC111961 BC143709 AK098667 NM_173553	498560	-	AK093499 AX748169 NM_178556 BC113860 BC114469	532776	+	NM_005245|FAT1|2195|FAT tumor suppressor homolog 1 (Drosophila)##X87241|FAT1|2195|FAT tumor suppressor homolog 1 (Drosophila)##AK056719|ZFP42|132625|zinc finger protein 42 homolog (mouse)##AY429593|ZFP42|132625|zinc finger protein 42 homolog (mouse)##NM_174900|ZFP42|132625|zinc finger protein 42 homolog (mouse)##BC111959|TRIML2|205860|tripartite motif family-like 2##BC111961|TRIML2|205860|tripartite motif family-like 2##BC143709|TRIML2|205860|tripartite motif family-like 2##AK098667|TRIML2|205860|tripartite motif family-like 2##NM_173553|TRIML2|205860|tripartite motif family-like 2##AK093499|TRIML1|339976|tripartite motif family-like 1##NM_178556|TRIML1|339976|tripartite motif family-like 1##BC113860|TRIML1|339976|tripartite motif family-like 1##BC114469|TRIML1|339976|tripartite motif family-like 1	0.996021	CTCF.p2:-1:0.996
chr11	79866586	79866736	reg1020944.p1	7.667	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-714937	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-1580766	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-1580869	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	2578237	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	2744856	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	2746113	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.955982	CTCF.p2:3:0.956
chr18	61630980	61631119	reg1020495.p1	7.667	+	NM_001123366	-14462	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	-48305	+	TSC_hg19_v1_chr18_+_61575223 AK314936	-55835	+	NM_001031848 NM_002640 NM_198833 AK300391 L40377 TSC_hg19_v1_chr18_+_61637345 BC034528 U92984 BX571754 AK313782	6264	+	AJ007611 NM_033646	1786438	+	TSC_hg19_v1_chr18_+_63417845 BC036786	1786817	+	NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##AK314936|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_001031848|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_002640|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_198833|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK300391|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##L40377|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BC034528|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##U92984|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BX571754|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK313782|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2	0.777391	CTCF.p2:9:0.777
chr12	55329220	55329371	reg1018362.p2	7.666	+	NM_058173 AF414087 AY359062 BC111421 AY651259	-80963	+	AY590150 AF144011 BC062682 BC069108 NM_053283 EF503687 EF503688 EF503689	-287090	-	CU686745 CU687522 AF238867 BC069317 NM_033277 BC062217	-300644	-	BC132732 BC132734 NM_001098815	46326	-	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	49207	-	NM_021191 AK314136	84475	+	NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1##AY590150|DCD|117159|dermcidin##AF144011|DCD|117159|dermcidin##BC062682|DCD|117159|dermcidin##BC069108|DCD|117159|dermcidin##NM_053283|DCD|117159|dermcidin##EF503687|DCD|117159|dermcidin##EF503688|DCD|117159|dermcidin##EF503689|DCD|117159|dermcidin##AF238867|LACRT|90070|lacritin##BC069317|LACRT|90070|lacritin##NM_033277|LACRT|90070|lacritin##BC062217|LACRT|90070|lacritin##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748##NM_021191|NEUROD4|58158|neurogenic differentiation 4##AK314136|NEUROD4|58158|neurogenic differentiation 4	0.146205	
chr12	8761725	8761851	reg1019329.p1	7.666	+	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	-68314	-	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	-95557	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	-153186	+	AB040431 BC006296 NM_020661	3651	-	TSC_hg19_v1_chr12_-_8815272 AK315807 BC005901 AK290585 AK299475	53508	-	TSC_hg19_v1_chr12_-_8815423 U37283 NM_003480	53613	-	BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##AB040431|AICDA|57379|activation-induced cytidine deaminase##BC006296|AICDA|57379|activation-induced cytidine deaminase##NM_020661|AICDA|57379|activation-induced cytidine deaminase##AK315807|MFAP5|8076|microfibrillar associated protein 5##BC005901|MFAP5|8076|microfibrillar associated protein 5##AK290585|MFAP5|8076|microfibrillar associated protein 5##AK299475|MFAP5|8076|microfibrillar associated protein 5##U37283|MFAP5|8076|microfibrillar associated protein 5##NM_003480|MFAP5|8076|microfibrillar associated protein 5	0.0	
chr16	69146689	69146822	reg1019687.p1	7.666	+	AF234839 NM_005329	-5313	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	-6615	+	AK291400 NM_001199280	-7289	+	TSC_hg19_v1_chr16_-_69166063 NM_001040146	19341	-	TSC_hg19_v1_chr16_-_69166427 BC018700	19682	-	TSC_hg19_v1_chr16_-_69166474 AF525164 AK000407	19717	-	AF234839|HAS3|3038|hyaluronan synthase 3##NM_005329|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_001040146|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)##BC018700|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)##AF525164|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)##AK000407|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	0.937849	CTCF.p2:-1:0.938
chr6	73334431	73334573	reg1020924.p1	7.666	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	-2441	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	-2613	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	-2932	+	BC004267 NM_001126063	600672	-	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	638364	-	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	638471	+	AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC004267|KHDC1L|100129128|KH homology domain containing 1-like##NM_001126063|KHDC1L|100129128|KH homology domain containing 1-like##BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1	0.0	
chr9	130073558	130073684	reg1022251.p1	7.666	+	NM_032293 AK293732 AK095679	-46814	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-188591	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-188659	-	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	85825	+	TSC_hg19_v1_chr9_-_130186602 AK124330	112945	-	NM_007135 TSC_hg19_v1_chr9_+_130186700 AK054606 BC062309 AK302284	113060	+	NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_007135|ZNF79|7633|zinc finger protein 79##AK054606|ZNF79|7633|zinc finger protein 79##BC062309|ZNF79|7633|zinc finger protein 79##AK302284|ZNF79|7633|zinc finger protein 79	0.984471	CTCF.p2:-11:0.984
chrY	2495430	2495544	reg1018493.p1	7.666	+	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	-126499	-	BC015030 NM_001171135	-126908	-	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	-811484	+	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	63825	+	S56543 S53156 AB464705 EU446863 BC074923 BC074924 L10101 NM_003140	160147	-	TSC_hg19_v1_chrY_+_2709618 NM_001008	214122	+	BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC015030|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule##S56543|SRY|6736|sex determining region Y##S53156|SRY|6736|sex determining region Y##EU446863|SRY|6736|sex determining region Y##BC074923|SRY|6736|sex determining region Y##BC074924|SRY|6736|sex determining region Y##L10101|SRY|6736|sex determining region Y##NM_003140|SRY|6736|sex determining region Y##NM_001008|RPS4Y1|6192|ribosomal protein S4, Y-linked 1	0.996078	CTCF.p2:14:0.996
chr5	169232820	169233000	reg1011085.p3	7.665	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-168610	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-168666	+	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	-222189	+	AK055998 NM_001129891	174833	-	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	300061	+	BC030767 NM_001102609 BC092511	427086	+	D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58	0.0	
chr5	177503005	177503127	reg1000422.p1	7.665	+	TSC_hg19_v1_chr5_+_177482580 AB055766	-20488	+	AF076215 NM_006261	-79824	-	AB018295 NM_173663	-295582	-	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	37562	+	TSC_hg19_v1_chr5_+_177558014 AK093481 AK094065 AX748156 AX748436 AK125337	54945	+	TSC_hg19_v1_chr5_+_177558026 BC009911 DQ494789 NM_022762	54966	+	AB055766|RPL19|6143|ribosomal protein L19##AF076215|PROP1|5626|PROP paired-like homeobox 1##NM_006261|PROP1|5626|PROP paired-like homeobox 1##AB018295|FAM153A|285596|family with sequence similarity 153, member A##NM_173663|FAM153A|285596|family with sequence similarity 153, member A##BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3##AK093481|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK094065|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK125337|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##BC009911|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##DQ494789|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##NM_022762|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)	0.103968	
chrX	2545430	2545544	reg1018492.p1	7.665	+	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	-126499	-	BC015030 NM_001171135	-126908	-	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	-811484	+	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	63825	+	AK304164 NM_001141919 NM_001141920 NM_175569 AF380356 AF534880 BC100764 BC100765 BC100766 BC100767 Z48517 Z48518 Z48519	124727	+	TSC_hg19_v1_chrX_+_2746813 NM_001079855 NM_001184702 NM_001184703 NM_001184704 NM_003918 U94362 AK098046 AK292496 U94363 BC023152	201415	+	BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC015030|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171135|ZBED1|9189|zinc finger, BED-type containing 1##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule##AK304164|XG|7499|Xg blood group##NM_001141919|XG|7499|Xg blood group##NM_001141920|XG|7499|Xg blood group##NM_175569|XG|7499|Xg blood group##AF380356|XG|7499|Xg blood group##BC100764|XG|7499|Xg blood group##BC100765|XG|7499|Xg blood group##BC100766|XG|7499|Xg blood group##BC100767|XG|7499|Xg blood group##Z48517|XG|7499|Xg blood group##Z48518|XGPY2|100132596|Xg pseudogene, Y-linked 2##Z48519|XGPY2|100132596|Xg pseudogene, Y-linked 2##NM_001079855|GYG2|8908|glycogenin 2##NM_001184702|GYG2|8908|glycogenin 2##NM_001184703|GYG2|8908|glycogenin 2##NM_001184704|GYG2|8908|glycogenin 2##NM_003918|GYG2|8908|glycogenin 2##U94362|GYG2|8908|glycogenin 2##AK098046|GYG2|8908|glycogenin 2##AK292496|GYG2|8908|glycogenin 2##U94363|GYG2|8908|glycogenin 2##BC023152|GYG2|8908|glycogenin 2	0.996078	CTCF.p2:14:0.996
chr17	77808837	77808973	reg1019994.p1	7.664	+	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-37998	-	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	-56924	+	AY230663 BC041453 NM_178543 AY358622	-104016	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	4237	-	BC044939 TSC_hg19_v1_chr17_+_77893233	84294	+	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	200697	-	EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16	1.055827	CTCF.p2:2:0.948
chr6	64062029	64062137	reg1018316.p1	7.664	+	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	-32219	-	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	-1066082	-	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	-5774404	-	TSC_hg19_v1_chr6_+_64231650 CR749458	169572	+	TSC_hg19_v1_chr6_+_64281913 BC045571 NM_003463	219833	+	TSC_hg19_v1_chr6_+_64282432 AK312526	220352	+	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AK312526|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	0.876276	CTCF.p2:-21:0.876
chr7	2517393	2517507	reg1019682.p1	7.664	+	TSC_hg19_v1_chr7_+_2443245 BC095492 BC002918 BC015954 AK223191 AK223211 AK313484 AF239822 AY358574	-74207	+	TSC_hg19_v1_chr7_+_2443191 NM_001243794 NM_001243795 NM_018641	-74270	+	TSC_hg19_v1_chr7_+_2394547 BC110865	-122903	+	AK096284 NM_001166355	34712	+	BC014851 NM_002304	40046	+	TSC_hg19_v1_chr7_+_2559407 NM_001040167 NM_001040168	41987	+	BC095492|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC002918|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC015954|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK223191|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK223211|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK313484|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AF239822|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AY358574|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_001243794|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_001243795|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_018641|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC110865|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##AK096284|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166355|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC014851|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002304|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001040167|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001040168|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	0.968748	CTCF.p2:-20:0.969
chr19	39832638	39832731	reg1012724.p2	7.662	+	BC143548 BC143546 TSC_hg19_v1_chr19_-_39826684 BC093799 BC101818 BC143543 NM_004877	-5984	-	AB001993 BC022207 BC061922 BC080180 TSC_hg19_v1_chr19_-_39826665	-6038	-	NM_020862	-26709	-	TSC_hg19_v1_chr19_+_39833098 AK001073	413	+	TSC_hg19_v1_chr19_+_39833101 BC054518 NM_018028 EF601121	431	+	TSC_hg19_v1_chr19_+_39833151 BC080641	474	+	BC143548|GMFG|9535|glia maturation factor, gamma##BC143546|GMFG|9535|glia maturation factor, gamma##BC093799|GMFG|9535|glia maturation factor, gamma##BC101818|GMFG|9535|glia maturation factor, gamma##BC143543|GMFG|9535|glia maturation factor, gamma##NM_004877|GMFG|9535|glia maturation factor, gamma##AB001993|GMFG|9535|glia maturation factor, gamma##BC022207|GMFG|9535|glia maturation factor, gamma##BC061922|GMFG|9535|glia maturation factor, gamma##BC080180|GMFG|9535|glia maturation factor, gamma##NM_020862|LRFN1|57622|leucine rich repeat and fibronectin type III domain containing 1##AK001073|SAMD4B|55095|sterile alpha motif domain containing 4B##BC054518|SAMD4B|55095|sterile alpha motif domain containing 4B##NM_018028|SAMD4B|55095|sterile alpha motif domain containing 4B##EF601121|SAMD4B|55095|sterile alpha motif domain containing 4B##BC080641|SAMD4B|55095|sterile alpha motif domain containing 4B	0.431824	CTCF.p2:32:0.432
chrX	100670633	100670745	reg1017252.p1	7.662	+	TSC_hg19_v1_chrX_+_100663231 U01923	-7434	+	AK298133 TSC_hg19_v1_chrX_+_100663213	-7470	+	TSC_hg19_v1_chrX_+_100663209 AK294144 BC030103	-7481	+	TSC_hg19_v1_chrX_+_100805532 AB039670 NM_016608 CR749609 AK222578 AK074785 BC002691 AF248963	134812	+	TSC_hg19_v1_chrX_-_100872931 BC007677 NM_001009584 NM_001184768 NM_019007	202269	-	TSC_hg19_v1_chrX_+_100878175 AK291225 NM_016607 NM_177947 BX647802 AF208859 AK222655 AB039669 BC005194 CR933656	207452	+	U01923|HNRNPH2|3188|heterogeneous nuclear ribonucleoprotein H2 (H')##AK298133|HNRNPH2|3188|heterogeneous nuclear ribonucleoprotein H2 (H')##AK294144|HNRNPH2|3188|heterogeneous nuclear ribonucleoprotein H2 (H')##AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1##NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1##CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1##AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1##AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1##BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1##AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1##BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6##NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6##NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6##NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6##AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3##BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3##AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3##AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3##BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3##CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3	0.999802	CTCF.p2:-18:1.000
chr2	96926542	96926675	reg1019221.p1	7.661	+	BC101730 BC101732 NM_001037228	-20632	+	TSC_hg19_v1_chr2_-_96874588 NM_020151	-52010	-	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	-52074	-	TSC_hg19_v1_chr2_-_96931700 BC039892	5079	-	TSC_hg19_v1_chr2_-_96931736 AX775835 BC028575 AK000514 AK293276	5121	-	TSC_hg19_v1_chr2_-_96931748 NM_001193304 NM_017849	5147	-	BC101730|LOC285033|285033|uncharacterized LOC285033##BC101732|LOC285033|285033|uncharacterized LOC285033##NM_001037228|LOC285033|285033|uncharacterized LOC285033##NM_020151|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC039892|TMEM127|55654|transmembrane protein 127##BC028575|TMEM127|55654|transmembrane protein 127##AK000514|TMEM127|55654|transmembrane protein 127##AK293276|TMEM127|55654|transmembrane protein 127##NM_001193304|TMEM127|55654|transmembrane protein 127##NM_017849|TMEM127|55654|transmembrane protein 127	0.290049	CTCF.p2:27:0.290
chr7	100887606	100887710	reg1017541.p1	7.661	+	AK056103 NM_001185080	-5558	-	BC010160 AJ245738 NM_014343	-6530	-	TSC_hg19_v1_chr7_+_100861461 AF093571 AK312136 U61837 AK125123 AB590267 CR456992 DQ892275 DQ895476	-26228	+	CU678480 BC003540 BC009428 TSC_hg19_v1_chr7_-_100888363 AF151893	667	-	TSC_hg19_v1_chr7_-_100888367 NM_016068	712	-	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	7908	-	AK056103|CLDN15|24146|claudin 15##NM_001185080|CLDN15|24146|claudin 15##BC010160|CLDN15|24146|claudin 15##AJ245738|CLDN15|24146|claudin 15##NM_014343|CLDN15|24146|claudin 15##AF093571|ZNHIT1|10467|zinc finger, HIT-type containing 1##AK312136|ZNHIT1|10467|zinc finger, HIT-type containing 1##U61837|ZNHIT1|10467|zinc finger, HIT-type containing 1##AK125123|ZNHIT1|10467|zinc finger, HIT-type containing 1##CR456992|ZNHIT1|10467|zinc finger, HIT-type containing 1##DQ892275|ZNHIT1|10467|zinc finger, HIT-type containing 1##DQ895476|ZNHIT1|10467|zinc finger, HIT-type containing 1##BC003540|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC009428|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AF151893|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##NM_016068|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)	0.960863	CTCF.p2:4:0.877
chr2	172220	172355	reg1018177.p1	7.660	+	DQ431183 TSC_hg19_v1_chr2_-_46477 AK302544 NM_001077710	-125802	-	None	None	None	None	None	None	AK055801 BC008374 BC013286 BC008375 AK026507 TSC_hg19_v1_chr2_-_264033	91720	-	TSC_hg19_v1_chr2_-_264039 NM_001159597 NM_015677	91765	-	BC043234 TSC_hg19_v1_chr2_-_264802 AK292312 BC030778 BC034974	92492	-	DQ431183|FAM110C|642273|family with sequence similarity 110, member C##AK302544|FAM110C|642273|family with sequence similarity 110, member C##NM_001077710|FAM110C|642273|family with sequence similarity 110, member C##AK055801|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC008374|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC013286|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC008375|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##AK026507|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##NM_001159597|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##NM_015677|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC043234|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##AK292312|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC030778|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC034974|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)	0.977937	CTCF.p2:-14:0.954
chr22	32869425	32869540	reg1016096.p1	7.660	+	AF465766 BC131582 NM_174932	-16110	-	TSC_hg19_v1_chr22_-_32808253 AK301945 NM_014306	-61224	-	AK297826 AK297908 BC016707 TSC_hg19_v1_chr22_-_32808235 AK312503 AF161466	-61246	-	TSC_hg19_v1_chr22_+_32870699 NM_012179 BC008361	1222	+	TSC_hg19_v1_chr22_+_32870797 AL050254 AK226087	1290	+	TSC_hg19_v1_chr22_+_32870829 CR456491	1368	+	AF465766|BPIFC|254240|BPI fold containing family C##BC131582|BPIFC|254240|BPI fold containing family C##NM_174932|BPIFC|254240|BPI fold containing family C##AK301945|C22orf28|51493|chromosome 22 open reading frame 28##NM_014306|C22orf28|51493|chromosome 22 open reading frame 28##AK297826|C22orf28|51493|chromosome 22 open reading frame 28##AK297908|C22orf28|51493|chromosome 22 open reading frame 28##BC016707|C22orf28|51493|chromosome 22 open reading frame 28##AK312503|C22orf28|51493|chromosome 22 open reading frame 28##AF161466|C22orf28|51493|chromosome 22 open reading frame 28##NM_012179|FBXO7|25793|F-box protein 7##BC008361|FBXO7|25793|F-box protein 7##AL050254|FBXO7|25793|F-box protein 7##AK226087|FBXO7|25793|F-box protein 7##CR456491|FBXO7|25793|F-box protein 7	0.897524	CTCF.p2:23:0.898
chr2	33666437	33666561	reg1018304.p2	7.660	+	AK125551 TSC_hg19_v1_chr2_+_33661417 BC027849 NM_170672 AK292983	-5051	+	TSC_hg19_v1_chr2_+_33359657 NM_000627 NM_001166264 NM_001166265 NM_001166266 AB208801 BC130289 BC144127 BC144128 M34057 AB384737 AF489528	-306794	+	NM_206943	-494131	+	NM_001139488	34821	+	TSC_hg19_v1_chr2_+_33701715 BX647990	35197	+	AB020653 NM_015376	72442	+	AK125551|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC027849|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_170672|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK292983|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1##AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1##M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1##AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_206943|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001139488|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)	0.84457	CTCF.p2:-6:0.845
chr2	71384716	71384832	reg1018588.p2	7.659	+	TSC_hg19_v1_chr2_+_71357768 AK310931 BC041084 X98494	-26989	+	TSC_hg19_v1_chr2_+_71357454 AK056862 NM_005791 BC126389	-27285	+	DQ891375 DQ894553 TSC_hg19_v1_chr2_-_71357360 BC020825 AF364547 NM_032601	-27395	-	TSC_hg19_v1_chr2_-_71454205 AB032981 NM_020459	69456	-	TSC_hg19_v1_chr2_+_71503722 AK303723 AK309221 AK293938	118952	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	174123	+	AK310931|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC041084|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##X98494|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##AK056862|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##NM_005791|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC126389|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##DQ891375|MCEE|84693|methylmalonyl CoA epimerase##DQ894553|MCEE|84693|methylmalonyl CoA epimerase##BC020825|MCEE|84693|methylmalonyl CoA epimerase##AF364547|MCEE|84693|methylmalonyl CoA epimerase##NM_032601|MCEE|84693|methylmalonyl CoA epimerase##AB032981|PAIP2B|400961|poly(A) binding protein interacting protein 2B##NM_020459|PAIP2B|400961|poly(A) binding protein interacting protein 2B##AK303723|ZNF638|27332|zinc finger protein 638##AK309221|ZNF638|27332|zinc finger protein 638##AK293938|ZNF638|27332|zinc finger protein 638##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638	0.972822	CTCF.p2:-2:0.973
chr14	92601789	92601915	reg1017425.p1	7.658	+	TSC_hg19_v1_chr14_+_92588315 BC060854 AK001912 AK001627 BC070095	-13526	+	TSC_hg19_v1_chr14_+_92588292 NM_017437	-13560	+	TSC_hg19_v1_chr14_-_92588066 BC104672 AB463916 HQ258048 BC126232 BC126234 NM_004545	-13744	-	AF520706 NM_153648	187072	+	AK295059 NM_153647	187684	+	NM_153646 AF520704 AF520705 BC069653	188324	+	BC060854|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##AK001912|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##AK001627|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##BC070095|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##NM_017437|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##BC104672|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##HQ258048|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##BC126232|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##BC126234|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##NM_004545|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##AF520706|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153648|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	0.771797	CTCF.p2:-19:0.772
chr15	78113932	78114046	reg1018520.p2	7.658	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-189209	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-189290	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-400727	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	255964	-	NM_001101404	270937	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	309773	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.498161	CTCF.p2:2:0.498
chr3	172391066	172391195	reg1019950.p1	7.658	+	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	-149952	-	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	-224907	-	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-632793	+	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	37760	-	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	77394	+	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	81172	+	AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene	0.897079	CTCF.p2:-8:0.897
chr12	69809634	69809763	reg1018587.p2	7.657	+	TSC_hg19_v1_chr12_+_69753535 NM_006530 U61384 AJ245746 BC000994 AK001413 AB464359 EU446926	-56092	+	TSC_hg19_v1_chr12_+_69742163 AK310930 AK311779 J03801 FJ795023 BC004147 M21119 M19045 AB463851 DQ892271 DQ895472 U25677	-67489	+	TSC_hg19_v1_chr12_+_69742133 AK130149 NM_000239	-67567	+	TSC_hg19_v1_chr12_+_69864170 NM_001042555 NM_006654 BC021562 AK312477	54444	+	TSC_hg19_v1_chr12_+_69979238 NM_006431 AK290767 BC113514 BC113516 AK297685 AF026166	169526	+	AF026293 TSC_hg19_v1_chr12_+_69979275	169579	+	NM_006530|YEATS4|8089|YEATS domain containing 4##U61384|YEATS4|8089|YEATS domain containing 4##AJ245746|YEATS4|8089|YEATS domain containing 4##BC000994|YEATS4|8089|YEATS domain containing 4##AK001413|YEATS4|8089|YEATS domain containing 4##EU446926|YEATS4|8089|YEATS domain containing 4##AK311779|LYZ|4069|lysozyme##J03801|LYZ|4069|lysozyme##FJ795023|LYZ|4069|lysozyme##BC004147|LYZ|4069|lysozyme##M21119|LYZ|4069|lysozyme##M19045|LYZ|4069|lysozyme##DQ892271|LYZ|4069|lysozyme##DQ895472|LYZ|4069|lysozyme##U25677|LYZ|4069|lysozyme##AK130149|LYZ|4069|lysozyme##NM_000239|LYZ|4069|lysozyme##NM_001042555|FRS2|10818|fibroblast growth factor receptor substrate 2##NM_006654|FRS2|10818|fibroblast growth factor receptor substrate 2##BC021562|FRS2|10818|fibroblast growth factor receptor substrate 2##AK312477|FRS2|10818|fibroblast growth factor receptor substrate 2##NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	0.213788	CTCF.p2:-11:0.214
chr12	80280834	80280952	reg1017060.p1	7.657	+	U63809 TSC_hg19_v1_chr12_-_80084784 NM_002583	-196128	-	AB590922 CR536549 BC007018 TSC_hg19_v1_chr12_-_80084318	-196678	-	CR627387 NM_001135806 AK308743	-841442	+	AK302692 NM_001143886	26797	-	TSC_hg19_v1_chr12_-_80328878 BC062560 AY380574 BC111752 D87930 AK314193 NM_001244992 BC047898 BC000812	47907	-	TSC_hg19_v1_chr12_-_80328937 NM_002480	48073	-	U63809|PAWR|5074|PRKC, apoptosis, WT1, regulator##NM_002583|PAWR|5074|PRKC, apoptosis, WT1, regulator##CR536549|PAWR|5074|PRKC, apoptosis, WT1, regulator##BC007018|PAWR|5074|PRKC, apoptosis, WT1, regulator##CR627387|SYT1|6857|synaptotagmin I##NM_001135806|SYT1|6857|synaptotagmin I##AK308743|SYT1|6857|synaptotagmin I##AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC062560|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##AY380574|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC111752|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##D87930|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##AK314193|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001244992|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC047898|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC000812|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_002480|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	0.058187	
chr17	36294374	36294492	reg1018884.p1	7.655	+	NM_001123391 NM_032258 AK313329 AK302064 BC078140 BC071680 AK301823 AL136860 BC047739	-10440	+	TSC_hg19_v1_chr17_-_36105051 HM116553 HM116554 HM116555 HM116556 AK290131 AK296633 AK298393 BC017714 X58840 NM_000458 NM_001165923	-189382	-	AB528419 BT007126 CR536572 DQ891528 EU176615 TSC_hg19_v1_chr17_-_36104898	-189547	-	BC033670 BC047739 AL136860 AK301823 BC071680 BC078140 AK302064 AK313329 NM_001123391 NM_032258	54192	-	BC067792 TSC_hg19_v1_chr17_-_36413224	118804	-	NM_032351 AK293605 BC130382 BC130384 TSC_hg19_v1_chr17_+_36453120	158621	+	NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##AK313329|TBC1D3|729873|TBC1 domain family, member 3##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##HM116553|HNF1B|6928|HNF1 homeobox B##HM116554|HNF1B|6928|HNF1 homeobox B##HM116555|HNF1B|6928|HNF1 homeobox B##HM116556|HNF1B|6928|HNF1 homeobox B##AK290131|HNF1B|6928|HNF1 homeobox B##AK296633|HNF1B|6928|HNF1 homeobox B##AK298393|HNF1B|6928|HNF1 homeobox B##BC017714|HNF1B|6928|HNF1 homeobox B##X58840|HNF1B|6928|HNF1 homeobox B##NM_000458|HNF1B|6928|HNF1 homeobox B##NM_001165923|HNF1B|6928|HNF1 homeobox B##BT007126|HNF1B|6928|HNF1 homeobox B##CR536572|HNF1B|6928|HNF1 homeobox B##DQ891528|HNF1B|6928|HNF1 homeobox B##EU176615|HNF1B|6928|HNF1 homeobox B##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##AK302064|TBC1D3|729873|TBC1 domain family, member 3##AK313329|TBC1D3|729873|TBC1 domain family, member 3##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##BC067792|LOC440434|440434|aminopeptidase puromycin sensitive pseudogene##NM_032351|MRPL45|84311|mitochondrial ribosomal protein L45##AK293605|MRPL45|84311|mitochondrial ribosomal protein L45##BC130382|MRPL45|84311|mitochondrial ribosomal protein L45##BC130384|MRPL45|84311|mitochondrial ribosomal protein L45	0.243231	CTCF.p2:-8:0.231
chr20	58712867	58713003	reg1018428.p2	7.655	+	TSC_hg19_v1_chr20_+_58630979 AK091179 AX746831 NM_173644	-81940	+	BC062570 NM_021810 AK074477	-141513	+	NM_177980 AK055202	-179460	+	TSC_hg19_v1_chr20_+_58713521 AK309218 AK092805 AX747739	599	+	TSC_hg19_v1_chr20_+_59827453 BC101651 BC112150 NM_001794 AK315192 L34059	1114570	+	AK308345 NM_001252338	1361541	+	AK091179|C20orf197|284756|chromosome 20 open reading frame 197##NM_173644|C20orf197|284756|chromosome 20 open reading frame 197##BC062570|CDH26|60437|cadherin 26##NM_021810|CDH26|60437|cadherin 26##AK074477|CDH26|60437|cadherin 26##NM_177980|CDH26|60437|cadherin 26##AK055202|CDH26|60437|cadherin 26##AK092805|LOC284757|284757|uncharacterized LOC284757##BC101651|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC112150|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001794|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK315192|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##L34059|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK308345|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252338|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)	0.995837	CTCF.p2:-33:0.996
chr3	100353777	100353913	reg1017023.p2	7.655	+	NM_032787 AK027360	-25407	+	BC040355 TSC_hg19_v1_chr3_+_100238088	-115770	+	TSC_hg19_v1_chr3_+_100211558 AK129789	-142262	+	NM_001007565 NM_001195479 NM_006070 TSC_hg19_v1_chr3_+_100428337 AK093456 BC009241	74400	+	TSC_hg19_v1_chr3_+_100428385 BC001483 NM_001195478	74528	+	TSC_hg19_v1_chr3_+_100428396 BC041600 BC023599	74619	+	NM_032787|GPR128|84873|G protein-coupled receptor 128##AK027360|GPR128|84873|G protein-coupled receptor 128##BC040355|TMEM45A|55076|transmembrane protein 45A##AK129789|TMEM45A|55076|transmembrane protein 45A##NM_001007565|TFG|10342|TRK-fused gene##NM_001195479|TFG|10342|TRK-fused gene##NM_006070|TFG|10342|TRK-fused gene##AK093456|TFG|10342|TRK-fused gene##BC009241|TFG|10342|TRK-fused gene##BC001483|TFG|10342|TRK-fused gene##NM_001195478|TFG|10342|TRK-fused gene##BC041600|TFG|10342|TRK-fused gene##BC023599|TFG|10342|TRK-fused gene	0.986428	CTCF.p2:-14:0.986
chr5	114910367	114910493	reg1015989.p2	7.655	+	TSC_hg19_v1_chr5_-_114880540 BC028369 NM_020177	-29867	-	TSC_hg19_v1_chr5_-_114880370 AL365415 AK315803 BC098385	-30073	-	AB587510 AJ580807 NM_001040440	-278082	-	BC109265 BC109266 NM_021649	27687	-	TSC_hg19_v1_chr5_-_114961697 AK074962	51262	-	TSC_hg19_v1_chr5_-_114961708 AY304583 AY304584 BC019349 AK075218 AK304210 AK027512 NM_001164468 NM_001164469 NM_181836	51364	-	BC028369|FEM1C|56929|fem-1 homolog c (C. elegans)##NM_020177|FEM1C|56929|fem-1 homolog c (C. elegans)##AL365415|FEM1C|56929|fem-1 homolog c (C. elegans)##AK315803|FEM1C|56929|fem-1 homolog c (C. elegans)##BC098385|FEM1C|56929|fem-1 homolog c (C. elegans)##AJ580807|CCDC112|153733|coiled-coil domain containing 112##NM_001040440|CCDC112|153733|coiled-coil domain containing 112##BC109265|TICAM2|353376|toll-like receptor adaptor molecule 2##BC109266|TICAM2|353376|toll-like receptor adaptor molecule 2##NM_021649|TICAM2|353376|toll-like receptor adaptor molecule 2##AK074962|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AY304583|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AY304584|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##BC019349|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK075218|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AK304210|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK027512|TMED7|51014|transmembrane emp24 protein transport domain containing 7##NM_001164468|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_001164469|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_181836|TMED7|51014|transmembrane emp24 protein transport domain containing 7	0.126828	
chr11	100699177	100699306	reg1017748.p2	7.654	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	-141113	+	AB013802 AB013803 NM_175566	-1272368	+	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	-1807492	+	AK314174 AF247167 NM_032021	163523	+	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	300558	-	AK304853 TSC_hg19_v1_chr11_-_101000531 NM_000926	301262	-	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor##AK304853|PGR|5241|progesterone receptor##NM_000926|PGR|5241|progesterone receptor	0.060279	
chr16	10040314	10040421	reg1016262.p1	7.654	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-854764	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-854827	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-983072	-	BC143273 U09002 NM_001134408	235466	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	235821	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	236310	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.876277	CTCF.p2:20:0.876
chr17	63552640	63552760	reg1017361.p1	7.654	+	TSC_hg19_v1_chr17_+_63133501 AK309061 AK290535 BC022504 AK301719 AF071476 AK289876 AF493933 AY585191	-419121	+	NM_001081955 NM_001165933 NM_003835 TSC_hg19_v1_chr17_+_63133479	-419230	+	TSC_hg19_v1_chr17_-_63052903 AK301699 NM_006572	-499799	-	BC006295 TSC_hg19_v1_chr17_-_63556453	3775	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	4979	-	CR933657 TSC_hg19_v1_chr17_-_63557767	5068	-	AK309061|RGS9|8787|regulator of G-protein signaling 9##AK290535|RGS9|8787|regulator of G-protein signaling 9##BC022504|RGS9|8787|regulator of G-protein signaling 9##AK301719|RGS9|8787|regulator of G-protein signaling 9##AF071476|RGS9|8787|regulator of G-protein signaling 9##AK289876|RGS9|8787|regulator of G-protein signaling 9##AF493933|RGS9|8787|regulator of G-protein signaling 9##AY585191|RGS9|8787|regulator of G-protein signaling 9##NM_001081955|RGS9|8787|regulator of G-protein signaling 9##NM_001165933|RGS9|8787|regulator of G-protein signaling 9##NM_003835|RGS9|8787|regulator of G-protein signaling 9##AK301699|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_006572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC006295|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##CR933657|AXIN2|8313|axin 2	0.994591	CTCF.p2:-4:0.995
chr2	168975287	168975419	reg1018440.p1	7.653	+	NM_020981	-300172	+	EF119711 EF119717 NM_001199144 NM_001199145	-931561	+	EF119718 EF119719 EF119720 EF119721 EF119722 NM_001079810 NM_001199143 NM_152381 AK097519	-1230357	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	128720	-	TSC_hg19_v1_chr2_+_169312764 AK172775	337406	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	337522	+	NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##EF119718|XIRP2|129446|xin actin-binding repeat containing 2##EF119719|XIRP2|129446|xin actin-binding repeat containing 2##EF119720|XIRP2|129446|xin actin-binding repeat containing 2##EF119721|XIRP2|129446|xin actin-binding repeat containing 2##EF119722|XIRP2|129446|xin actin-binding repeat containing 2##NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199143|XIRP2|129446|xin actin-binding repeat containing 2##NM_152381|XIRP2|129446|xin actin-binding repeat containing 2##AK097519|XIRP2|129446|xin actin-binding repeat containing 2##BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##AK172775|CERS6|253782|ceramide synthase 6##NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6	0.978056	CTCF.p2:6:0.978
chr4	20775164	20775280	reg1020917.p1	7.653	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	-73155	+	AB017168 NM_004787 BC117190 BC143978 AF133270	-519886	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-2751756	-	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	210407	-	AY118170 DQ148489 NM_147183 AK290998	530347	-	DQ148491 NM_001035004	771056	-	AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4##AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4##DQ148491|KCNIP4|80333|Kv channel interacting protein 4##NM_001035004|KCNIP4|80333|Kv channel interacting protein 4	0.721634	CTCF.p2:-3:0.722
chr16	79636157	79636278	reg1016527.p1	7.652	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-1602	-	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-1502762	+	NM_001244755	-1573232	+	AF125108 NM_130897 BC054892 BC035232	938671	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	1201830	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	1403867	+	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N	0.617974	CTCF.p2:19:0.618
chr2	178469302	178469443	reg1021431.p1	7.652	+	TSC_hg19_v1_chr2_-_178417525 AK296828 AK055552 BC033795 NM_152517	-51887	-	TSC_hg19_v1_chr2_+_178257497 AK225439 AK314259 Y09443 BC141820 AY544121 AK296239 AK316240	-211743	+	AK309714 TSC_hg19_v1_chr2_+_178257487 NM_003659	-211943	+	TSC_hg19_v1_chr2_-_178483463 CU692122 AK057530 AK125104 BC048006	14056	-	AK292395 BC042848 NM_152275	14313	-	AJ251509 NM_001077196	284092	-	AK296828|TTC30B|150737|tetratricopeptide repeat domain 30B##AK055552|TTC30B|150737|tetratricopeptide repeat domain 30B##BC033795|TTC30B|150737|tetratricopeptide repeat domain 30B##NM_152517|TTC30B|150737|tetratricopeptide repeat domain 30B##AK314259|AGPS|8540|alkylglycerone phosphate synthase##Y09443|AGPS|8540|alkylglycerone phosphate synthase##BC141820|AGPS|8540|alkylglycerone phosphate synthase##AY544121|AGPS|8540|alkylglycerone phosphate synthase##AK296239|AGPS|8540|alkylglycerone phosphate synthase##AK316240|AGPS|8540|alkylglycerone phosphate synthase##AK309714|AGPS|8540|alkylglycerone phosphate synthase##NM_003659|AGPS|8540|alkylglycerone phosphate synthase##AK057530|TTC30A|92104|tetratricopeptide repeat domain 30A##AK125104|TTC30A|92104|tetratricopeptide repeat domain 30A##BC048006|TTC30A|92104|tetratricopeptide repeat domain 30A##AK292395|TTC30A|92104|tetratricopeptide repeat domain 30A##BC042848|TTC30A|92104|tetratricopeptide repeat domain 30A##NM_152275|TTC30A|92104|tetratricopeptide repeat domain 30A##AJ251509|PDE11A|50940|phosphodiesterase 11A##NM_001077196|PDE11A|50940|phosphodiesterase 11A	0.223085	CTCF.p2:-2:0.223
chr1	241774426	241774560	reg1017611.p1	7.651	+	NM_003679 AK310937 BC005297 AK291558 AF056032 Y13153 CU675097	-78906	+	AK312415 TSC_hg19_v1_chr1_-_241683076 NM_000143	-91413	-	TSC_hg19_v1_chr1_-_241683023 BT009839 AB590519 EU176358 BC017444 BC003108 U48857 U59309	-91461	-	BC117360 NM_001821 X64728	24673	-	TSC_hg19_v1_chr1_-_241803669 BC051900 AF140242 BC073872 BC062622 AF303588 BC036773 BC026242 NM_014322	28982	-	AK122927 NM_144625	41086	+	NM_003679|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AK310937|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##BC005297|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AK291558|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AF056032|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##Y13153|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AK312415|FH|2271|fumarate hydratase##NM_000143|FH|2271|fumarate hydratase##BT009839|FH|2271|fumarate hydratase##EU176358|FH|2271|fumarate hydratase##BC017444|FH|2271|fumarate hydratase##BC003108|FH|2271|fumarate hydratase##U48857|FH|2271|fumarate hydratase##U59309|FH|2271|fumarate hydratase##BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)##NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)##X64728|CHML|1122|choroideremia-like (Rab escort protein 2)##BC051900|OPN3|23596|opsin 3##AF140242|OPN3|23596|opsin 3##BC073872|OPN3|23596|opsin 3##BC062622|OPN3|23596|opsin 3##AF303588|OPN3|23596|opsin 3##BC036773|OPN3|23596|opsin 3##NM_014322|OPN3|23596|opsin 3##AK122927|WDR64|128025|WD repeat domain 64##NM_144625|WDR64|128025|WD repeat domain 64	0.902818	CTCF.p2:0:0.903
chr17	4693274	4693425	reg1020097.p1	7.651	+	TSC_hg19_v1_chr17_+_4692258 BC029290 NM_001014985	-1078	+	BC104194 AY359099 BC104195 AF521892 BC038467 NM_001144939 NM_001144940 NM_001144941 NM_182566	-3731	-	TSC_hg19_v1_chr17_+_4675180 AX772822 BC069519 NM_003963 AF027204 BC093688 BC117163 CU686880 CR456925 CR541798	-18153	+	TSC_hg19_v1_chr17_-_4693697 BC127703 BC150535 AK057919	344	-	NM_002798 TSC_hg19_v1_chr17_+_4699458	6108	+	BC000835 TSC_hg19_v1_chr17_+_4699472	6122	+	BC029290|GLTPD2|388323|glycolipid transfer protein domain containing 2##NM_001014985|GLTPD2|388323|glycolipid transfer protein domain containing 2##BC104194|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##AY359099|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##BC104195|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##AF521892|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##BC038467|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##NM_001144939|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##NM_001144940|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##NM_001144941|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##NM_182566|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##BC069519|TM4SF5|9032|transmembrane 4 L six family member 5##NM_003963|TM4SF5|9032|transmembrane 4 L six family member 5##AF027204|TM4SF5|9032|transmembrane 4 L six family member 5##BC093688|TM4SF5|9032|transmembrane 4 L six family member 5##BC117163|TM4SF5|9032|transmembrane 4 L six family member 5##CR456925|TM4SF5|9032|transmembrane 4 L six family member 5##CR541798|TM4SF5|9032|transmembrane 4 L six family member 5##AK057919|LOC284014|284014|uncharacterized LOC284014##NM_002798|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##BC000835|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6	1.187694	CTCF.p2:-37:0.559	CTCF.p2:105:0.475
chr4	4671019	4671162	reg1021146.p1	7.651	+	TSC_hg19_v1_chr4_+_4543925 BC025734	-127206	+	TSC_hg19_v1_chr4_-_4543750 NM_016930	-127329	-	TSC_hg19_v1_chr4_-_4543741 AK310026	-127359	-	TSC_hg19_v1_chr4_+_4861391 NM_002448 AK290636 M97676 BC021285	190308	+	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	350056	-	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	382190	+	BC025734|LOC100507266|100507266|uncharacterized LOC100507266##NM_016930|STX18|53407|syntaxin 18##AK310026|STX18|53407|syntaxin 18##NM_002448|MSX1|4487|msh homeobox 1##AK290636|MSX1|4487|msh homeobox 1##M97676|MSX1|4487|msh homeobox 1##BC021285|MSX1|4487|msh homeobox 1##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B	0.030484	
chr7	154744832	154744945	reg1019621.p1	7.651	+	TSC_hg19_v1_chr7_+_154720213 BC033053 AK311721 AK056609 BC050402	-24691	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	-742503	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	-995130	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	49782	-	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	50323	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	117689	+	BC033053|LOC100132707|100132707|uncharacterized LOC100132707##AK311721|LOC100132707|100132707|uncharacterized LOC100132707##AK056609|LOC100132707|100132707|uncharacterized LOC100132707##BC050402|LOC100132707|100132707|uncharacterized LOC100132707##AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781##BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A	1.014343	CTCF.p2:2:0.997
chr7	95315542	95315640	reg1016297.p1	7.651	+	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	-89728	-	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-200298	+	TSC_hg19_v1_chr7_-_95064341 AB102891 CU692318 AB591009 L48513 BC040010 AF001602 AF001601 BC073739 AK296029 BC093006 BC046160 AK291103 AK308065 AK315209 AK296636 BC009728 NM_000305 NM_001018161 AK301313	-251230	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	86317	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	635811	-	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	817236	-	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##AB102891|PON2|5445|paraoxonase 2##L48513|PON2|5445|paraoxonase 2##BC040010|PON2|5445|paraoxonase 2##AF001602|PON2|5445|paraoxonase 2##AF001601|PON2|5445|paraoxonase 2##AK296029|PON2|5445|paraoxonase 2##BC093006|PON2|5445|paraoxonase 2##BC046160|PON2|5445|paraoxonase 2##AK291103|PON2|5445|paraoxonase 2##AK308065|PON2|5445|paraoxonase 2##AK315209|PON2|5445|paraoxonase 2##AK296636|PON2|5445|paraoxonase 2##BC009728|PON2|5445|paraoxonase 2##NM_000305|PON2|5445|paraoxonase 2##NM_001018161|PON2|5445|paraoxonase 2##AK301313|PON2|5445|paraoxonase 2##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280	0.244332	CTCF.p2:39:0.244
chr22	35627630	35627736	reg1017870.p2	7.650	+	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	-165534	+	AJ007583 AB011181 NM_004737 NM_133642	-1311313	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-2173328	-	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	25793	+	AK293694 NM_001135729	67584	+	TSC_hg19_v1_chr22_+_35695855 NM_001135730 NM_001135732 NM_005488 AK026576 AJ006973 AY358980	68148	+	CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)##NM_001135730|TOM1|10043|target of myb1 (chicken)##NM_001135732|TOM1|10043|target of myb1 (chicken)##NM_005488|TOM1|10043|target of myb1 (chicken)##AK026576|TOM1|10043|target of myb1 (chicken)##AJ006973|TOM1|10043|target of myb1 (chicken)##AY358980|TOM1|10043|target of myb1 (chicken)	0.970645	CTCF.p2:-6:0.971
chr1	209381112	209381225	reg1018048.p1	7.649	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-963519	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-1296611	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-1296785	-	AK091113 AX746785 NM_001104548	220997	+	NM_020439 AK095713 AK289675 AF428261 BC032787	375892	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	443511	-	NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3	0.601431	CTCF.p2:18:0.601
chr6	117799701	117799848	reg1017772.p2	7.648	+	M34353 NM_002944 TSC_hg19_v1_chr6_-_117747031	-52743	-	AY056583 NM_153453 TSC_hg19_v1_chr6_+_117586720 AJ578053 NM_182645 BC100798 BC100799 BC118545 BC118622 BC069316 AK096878	-212963	+	BC039248 NM_173560	-601399	+	TSC_hg19_v1_chr6_+_117803805 BC035671 NM_173674 AK095973	4063	+	CU679397 TSC_hg19_v1_chr6_-_117923611 AF287894	123757	-	TSC_hg19_v1_chr6_-_117923643 BC009553 AY033606 AB209385	123859	-	M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##AY056583|VGLL2|245806|vestigial like 2 (Drosophila)##NM_153453|VGLL2|245806|vestigial like 2 (Drosophila)##AJ578053|VGLL2|245806|vestigial like 2 (Drosophila)##NM_182645|VGLL2|245806|vestigial like 2 (Drosophila)##BC100798|VGLL2|245806|vestigial like 2 (Drosophila)##BC100799|VGLL2|245806|vestigial like 2 (Drosophila)##BC118545|VGLL2|245806|vestigial like 2 (Drosophila)##BC118622|VGLL2|245806|vestigial like 2 (Drosophila)##BC069316|VGLL2|245806|vestigial like 2 (Drosophila)##AK096878|VGLL2|245806|vestigial like 2 (Drosophila)##BC039248|RFX6|222546|regulatory factor X, 6##NM_173560|RFX6|222546|regulatory factor X, 6##BC035671|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##NM_173674|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AK095973|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AF287894|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##BC009553|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AY033606|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AB209385|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing	0.115891	
chr10	45804352	45804480	reg1016869.p1	7.647	+	TSC_hg19_v1_chr10_-_45496265 AK311351 HQ258049 BC062568 BC130369 BC130395 AK055129 NM_001039380	-308052	-	NM_006963 AK291508 AK312278 BC053687 BC010642	-308089	+	BC011402 AB025244 TSC_hg19_v1_chr10_-_45474258 AK002191 AK098476 AL136653 AB022718 AK300839 AK312496 NM_007021	-330147	-	AK131555 NM_001004297	6639	-	TSC_hg19_v1_chr10_+_45869638 AB208946 NM_000698 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223	65221	+	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	65281	+	AK311351|C10orf25|220979|chromosome 10 open reading frame 25##HQ258049|C10orf25|220979|chromosome 10 open reading frame 25##BC062568|C10orf25|220979|chromosome 10 open reading frame 25##BC130369|C10orf25|220979|chromosome 10 open reading frame 25##BC130395|C10orf25|220979|chromosome 10 open reading frame 25##AK055129|C10orf25|220979|chromosome 10 open reading frame 25##NM_001039380|C10orf25|220979|chromosome 10 open reading frame 25##NM_006963|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK291508|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK312278|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC053687|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC010642|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC011402|C10orf10|11067|chromosome 10 open reading frame 10##AB025244|C10orf10|11067|chromosome 10 open reading frame 10##AK002191|C10orf10|11067|chromosome 10 open reading frame 10##AK098476|C10orf10|11067|chromosome 10 open reading frame 10##AL136653|C10orf10|11067|chromosome 10 open reading frame 10##AB022718|C10orf10|11067|chromosome 10 open reading frame 10##AK300839|C10orf10|11067|chromosome 10 open reading frame 10##AK312496|C10orf10|11067|chromosome 10 open reading frame 10##NM_007021|C10orf10|11067|chromosome 10 open reading frame 10##AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##AB208946|ALOX5|240|arachidonate 5-lipoxygenase##NM_000698|ALOX5|240|arachidonate 5-lipoxygenase##AK225603|ALOX5|240|arachidonate 5-lipoxygenase##BC130332|ALOX5|240|arachidonate 5-lipoxygenase##BC132677|ALOX5|240|arachidonate 5-lipoxygenase##BC143985|ALOX5|240|arachidonate 5-lipoxygenase##BC143986|ALOX5|240|arachidonate 5-lipoxygenase##AK315223|ALOX5|240|arachidonate 5-lipoxygenase##BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase	0.0	
chr7	72738258	72738375	reg1018642.p1	7.647	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	-15492	-	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	-169285	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-313074	-	AK057366 AY081948 AY081949 NM_178125	3768	-	NM_001135211 AK302121 NM_003602 AK310255 BC036817 AF038847 CU691432 EU176233 EU176537 GQ129339 GQ129340	3976	+	NM_003508 BC026333	109794	+	DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50##NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa##AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa##NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa##AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa##BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa##AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa##NM_003508|FZD9|8326|frizzled family receptor 9##BC026333|FZD9|8326|frizzled family receptor 9	0.576607	CTCF.p2:0:0.577
chr9	35554064	35554194	reg1020453.p1	7.647	+	TSC_hg19_v1_chr9_+_35538893 BC146654 AK294715 AK299805	-15215	+	NM_001135999	-15501	+	TSC_hg19_v1_chr9_+_35490107 BC150211 AB002373 BC042915	-64045	+	TSC_hg19_v1_chr9_+_35560424 BC082245 BC029647	6338	+	BC129999 BC146928 BC146933 BC171840 BC171851 NM_001099951 NM_001164310	9766	-	TSC_hg19_v1_chr9_+_35605307 BC067130 NM_006285 BC038448	51174	+	BC146654|RUSC2|9853|RUN and SH3 domain containing 2##AK299805|RUSC2|9853|RUN and SH3 domain containing 2##NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2##BC150211|RUSC2|9853|RUN and SH3 domain containing 2##AB002373|RUSC2|9853|RUN and SH3 domain containing 2##BC082245|RUSC2|9853|RUN and SH3 domain containing 2##BC029647|RUSC2|9853|RUN and SH3 domain containing 2##BC129999|FAM166B|730112|family with sequence similarity 166, member B##BC146928|FAM166B|730112|family with sequence similarity 166, member B##BC146933|FAM166B|730112|family with sequence similarity 166, member B##BC171840|FAM166B|730112|family with sequence similarity 166, member B##BC171851|FAM166B|730112|family with sequence similarity 166, member B##NM_001099951|FAM166B|730112|family with sequence similarity 166, member B##NM_001164310|FAM166B|730112|family with sequence similarity 166, member B##BC067130|TESK1|7016|testis-specific kinase 1##NM_006285|TESK1|7016|testis-specific kinase 1##BC038448|TESK1|7016|testis-specific kinase 1	0.015191	
chr17	36204436	36204595	reg1016983.p1	7.646	+	TSC_hg19_v1_chr17_-_36105051 HM116553 HM116554 HM116555 HM116556 AK290131 AK296633 AK298393 BC017714 X58840 NM_000458 NM_001165923	-99464	-	AB528419 BT007126 CR536572 DQ891528 EU176615 TSC_hg19_v1_chr17_-_36104898	-99629	-	TSC_hg19_v1_chr17_-_36003470 AF077033 AK001652 AK093661 AX748248 BC041785 NM_007010	-201038	-	NM_001123391 NM_032258 AK313329 AK302064 BC078140 BC071680 AK301823 AL136860 BC047739	79478	+	BC033670 BC047739 AL136860 AK301823 BC071680 BC078140 AK302064 AK313329 NM_001123391 NM_032258	144110	-	BC067792 TSC_hg19_v1_chr17_-_36413224	208722	-	HM116553|HNF1B|6928|HNF1 homeobox B##HM116554|HNF1B|6928|HNF1 homeobox B##HM116555|HNF1B|6928|HNF1 homeobox B##HM116556|HNF1B|6928|HNF1 homeobox B##AK290131|HNF1B|6928|HNF1 homeobox B##AK296633|HNF1B|6928|HNF1 homeobox B##AK298393|HNF1B|6928|HNF1 homeobox B##BC017714|HNF1B|6928|HNF1 homeobox B##X58840|HNF1B|6928|HNF1 homeobox B##NM_000458|HNF1B|6928|HNF1 homeobox B##NM_001165923|HNF1B|6928|HNF1 homeobox B##BT007126|HNF1B|6928|HNF1 homeobox B##CR536572|HNF1B|6928|HNF1 homeobox B##DQ891528|HNF1B|6928|HNF1 homeobox B##EU176615|HNF1B|6928|HNF1 homeobox B##AF077033|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK001652|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK093661|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC041785|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_007010|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##AK313329|TBC1D3|729873|TBC1 domain family, member 3##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##AK302064|TBC1D3|729873|TBC1 domain family, member 3##AK313329|TBC1D3|729873|TBC1 domain family, member 3##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##BC067792|LOC440434|440434|aminopeptidase puromycin sensitive pseudogene	0.037911	
chr2	161775530	161775680	reg1022066.p1	7.646	+	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	-425288	-	CU676342 D28482 X77494 AK225887 L11289 TSC_hg19_v1_chr2_-_161350025 AK309949 BC012992 BC012993 AK297812	-425646	-	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	-645416	-	NM_004180 NM_133484 U59863 U63830	217860	+	TSC_hg19_v1_chr2_+_162016938 AK313096 NM_001199135 BC067779	241344	+	NM_005805 TSC_hg19_v1_chr2_+_162164936 BC066336	389257	+	BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_004180|TANK|10010|TRAF family member-associated NFKB activator##NM_133484|TANK|10010|TRAF family member-associated NFKB activator##U59863|TANK|10010|TRAF family member-associated NFKB activator##U63830|TANK|10010|TRAF family member-associated NFKB activator##AK313096|TANK|10010|TRAF family member-associated NFKB activator##NM_001199135|TANK|10010|TRAF family member-associated NFKB activator##BC067779|TANK|10010|TRAF family member-associated NFKB activator##NM_005805|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##BC066336|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14	0.99433	CTCF.p2:5:0.994
chrX	23920649	23920778	reg1006566.p2	7.646	+	TSC_hg19_v1_chrX_-_23855464 AK303908 D28399	-65253	-	TSC_hg19_v1_chrX_+_23801432 M55580 AY841998 AB464243 AM392717 BT006825 CR450294	-119264	+	NM_002970 TSC_hg19_v1_chrX_+_23801289 AK310078 BC008424 AK312162 AK310094 M77693 AL050290 BC002503 AK315888	-119401	+	TSC_hg19_v1_chrX_-_23926052 AY359114 AK311865 AF061264 BC016814 BC002333 BC010102 NM_024122	5297	-	AK058173 NM_001169574 NM_152761 BC117344 BC117346 BC144007	5453	+	AK057298 NM_030624	124589	-	AK303908|RPL9|6133|ribosomal protein L9##M55580|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AY841998|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BT006825|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##CR450294|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##NM_002970|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK310078|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BC008424|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK312162|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##M77693|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AL050290|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BC002503|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK315888|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AY359114|APOO|79135|apolipoprotein O##AK311865|APOO|79135|apolipoprotein O##AF061264|APOO|79135|apolipoprotein O##BC016814|APOO|79135|apolipoprotein O##BC002333|APOO|79135|apolipoprotein O##BC010102|APOO|79135|apolipoprotein O##NM_024122|APOO|79135|apolipoprotein O##AK058173|CXorf58|254158|chromosome X open reading frame 58##NM_001169574|CXorf58|254158|chromosome X open reading frame 58##NM_152761|CXorf58|254158|chromosome X open reading frame 58##BC117344|CXorf58|254158|chromosome X open reading frame 58##BC117346|CXorf58|254158|chromosome X open reading frame 58##BC144007|CXorf58|254158|chromosome X open reading frame 58##AK057298|KLHL15|80311|kelch-like 15 (Drosophila)##NM_030624|KLHL15|80311|kelch-like 15 (Drosophila)	0.71472	CTCF.p2:52:0.715
chrX	40974498	40974601	reg1017224.p1	7.646	+	TSC_hg19_v1_chrX_+_40944880 NM_001039590 NM_001039591	-29677	+	TSC_hg19_v1_chrX_-_40595139 AK308871	-379420	-	TSC_hg19_v1_chrX_-_40594999 AK293070	-379569	-	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	218101	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	218908	+	AK304661 TSC_hg19_v1_chrX_+_41193866 AK127902	219316	+	NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked##NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked##AK308871|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	0.999457	CTCF.p2:-19:0.999
chr10	85786691	85786817	reg1016963.p2	7.645	+	DQ857894 NM_001165973	-2149312	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-2151672	+	AK123978 NM_001145719	-3486180	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	112503	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	145038	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	146805	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.388373	CTCF.p2:-9:0.388
chr12	74759499	74759622	reg1015825.p1	7.645	+	TSC_hg19_v1_chr12_-_72667288 BC040230	-2092290	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	-2093056	+	AK095156 TSC_hg19_v1_chr12_-_72666355	-2093217	-	NM_001136262 TSC_hg19_v1_chr12_+_74931614 AK056642	172025	+	TSC_hg19_v1_chr12_+_74931622 BC009111 AL713650	172079	+	AK054742 TSC_hg19_v1_chr12_+_74933681	174060	+	BC040230|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AK095156|LOC283392|283392|uncharacterized LOC283392##NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B##AK056642|ATXN7L3B|552889|ataxin 7-like 3B##BC009111|ATXN7L3B|552889|ataxin 7-like 3B##AL713650|ATXN7L3B|552889|ataxin 7-like 3B	1.025988	CTCF.p2:23:0.998
chr1	41779439	41779584	reg1018705.p2	7.645	+	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-71675	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-71726	-	BC021252 NM_001172221	-150823	-	BC034393 X55177 M65199 NM_001956	170808	-	TSC_hg19_v1_chr1_-_42384357 BC040942	604831	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	604862	-	BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC021252|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172221|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.020057	
chr14	70344365	70344498	reg1018601.p1	7.645	+	CU687020 HQ258189 BC074724 BC126298 BC136355 AY544127 BC069822 BC069799 L21893 AK314028 NM_003049	-80493	-	AF070562 TSC_hg19_v1_chr14_+_70236305	-108144	+	TSC_hg19_v1_chr14_+_70233881 BX247988 U30826 U30827 U30884	-110542	+	NM_001034852 NM_022137 TSC_hg19_v1_chr14_+_70346132 AK289988 AK313063 AJ249900 BC011548 BC008608	1698	+	AK096553 AJ745101 AJ745102 BC114217 NM_182936 AK122728 BC142969 NM_001130417	202461	-	BC036783 BX248763 TSC_hg19_v1_chr14_-_70655669 AF510501 AF510502 AF510503 NM_033262 NM_058240 NM_182932 NM_183002	311256	-	HQ258189|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC074724|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC126298|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC136355|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AY544127|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC069822|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC069799|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##L21893|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AK314028|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##NM_003049|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AF070562|SRSF5|6430|serine/arginine-rich splicing factor 5##BX247988|SRSF5|6430|serine/arginine-rich splicing factor 5##U30826|SRSF5|6430|serine/arginine-rich splicing factor 5##U30827|SRSF5|6430|serine/arginine-rich splicing factor 5##U30884|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_001034852|SMOC1|64093|SPARC related modular calcium binding 1##NM_022137|SMOC1|64093|SPARC related modular calcium binding 1##AK289988|SMOC1|64093|SPARC related modular calcium binding 1##AK313063|SMOC1|64093|SPARC related modular calcium binding 1##AJ249900|SMOC1|64093|SPARC related modular calcium binding 1##BC011548|SMOC1|64093|SPARC related modular calcium binding 1##BC008608|SMOC1|64093|SPARC related modular calcium binding 1##AK096553|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745101|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745102|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC114217|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182936|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AK122728|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC142969|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_001130417|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC036783|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BX248763|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510501|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510502|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510503|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_033262|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_058240|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182932|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_183002|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3	0.988967	CTCF.p2:-9:0.989
chr6	145349482	145349620	reg1017716.p1	7.645	+	NM_007124 X69086	-736633	+	TSC_hg19_v1_chr6_+_144607461 AK292506	-742071	+	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	-877830	+	AK124757 TSC_hg19_v1_chr6_+_146056061	706483	+	TSC_hg19_v1_chr6_-_146056437 AJ130763 AJ130764	706862	-	AF454494 TSC_hg19_v1_chr6_-_146056628 AF454493 BC005286 AF084535	707050	-	NM_007124|UTRN|7402|utrophin##X69086|UTRN|7402|utrophin##AK292506|UTRN|7402|utrophin##NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11##AK124757|LOC100507557|100507557|uncharacterized LOC100507557##AJ130763|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AJ130764|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454494|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454493|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##BC005286|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF084535|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	0.994794	CTCF.p2:9:0.995
chr11	3042554	3042681	reg1017270.p2	7.644	+	TSC_hg19_v1_chr11_-_3013610 NM_005969 U77456 AK312599	-29018	-	AK316324 TSC_hg19_v1_chr11_-_3013560	-29062	-	TSC_hg19_v1_chr11_-_3013522 AK299515	-29092	-	BT009913 CU678270 DQ890773 AK308005 TSC_hg19_v1_chr11_-_3078625 AB208814 AF288206 AF288207 AK222614 AK296763 AK131221 AK096313 AK295371 AK298514 AK302644 BX647906 AK289432 BC002880 NM_001014437 NM_001194997 NM_001751 NM_139273	36021	-	AK301003 TSC_hg19_v1_chr11_-_3147850	105226	-	TSC_hg19_v1_chr11_-_3186504 BC032646 BC039579 AF392453 AL136918	143872	-	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4##U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4##BT009913|CARS|833|cysteinyl-tRNA synthetase##DQ890773|CARS|833|cysteinyl-tRNA synthetase##AK308005|CARS|833|cysteinyl-tRNA synthetase##AB208814|CARS|833|cysteinyl-tRNA synthetase##AF288206|CARS|833|cysteinyl-tRNA synthetase##AF288207|CARS|833|cysteinyl-tRNA synthetase##AK222614|CARS|833|cysteinyl-tRNA synthetase##AK296763|CARS|833|cysteinyl-tRNA synthetase##AK131221|CARS|833|cysteinyl-tRNA synthetase##AK096313|CARS|833|cysteinyl-tRNA synthetase##AK295371|CARS|833|cysteinyl-tRNA synthetase##AK298514|CARS|833|cysteinyl-tRNA synthetase##AK302644|CARS|833|cysteinyl-tRNA synthetase##BX647906|CARS|833|cysteinyl-tRNA synthetase##AK289432|CARS|833|cysteinyl-tRNA synthetase##BC002880|CARS|833|cysteinyl-tRNA synthetase##NM_001014437|CARS|833|cysteinyl-tRNA synthetase##NM_001194997|CARS|833|cysteinyl-tRNA synthetase##NM_001751|CARS|833|cysteinyl-tRNA synthetase##NM_139273|CARS|833|cysteinyl-tRNA synthetase##AK301003|OSBPL5|114879|oxysterol binding protein-like 5##BC032646|OSBPL5|114879|oxysterol binding protein-like 5##BC039579|OSBPL5|114879|oxysterol binding protein-like 5##AF392453|OSBPL5|114879|oxysterol binding protein-like 5##AL136918|OSBPL5|114879|oxysterol binding protein-like 5	0.83777	CTCF.p2:3:0.838
chr20	43740684	43740796	reg1015100.p1	7.644	+	BC132957 BC132959 BC144234 TSC_hg19_v1_chr20_-_43729732 AK289735 NM_002251	-11051	-	AK315238 U60207 TSC_hg19_v1_chr20_+_43595176 BC058916 BC039023 U18297	-145549	+	NM_006282 TSC_hg19_v1_chr20_+_43595152 AB209315 BC029511 AK309169 AK225326 BC005231 BC015332 BC038850 CR933633 BC093768	-145594	+	CU691668 AY038181 BC039173 AY358822 NM_145652	3027	-	AB464352 AY358678 AY037803 NM_080869	12356	-	NM_002638 BC010952 DQ892710 DQ895962 AB590207 Z18538 CR542234	62811	+	BC132957|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC132959|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC144234|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##AK289735|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##NM_002251|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##AK315238|STK4|6789|serine/threonine kinase 4##U60207|STK4|6789|serine/threonine kinase 4##BC058916|STK4|6789|serine/threonine kinase 4##BC039023|STK4|6789|serine/threonine kinase 4##U18297|STK4|6789|serine/threonine kinase 4##NM_006282|STK4|6789|serine/threonine kinase 4##AB209315|STK4|6789|serine/threonine kinase 4##BC029511|STK4|6789|serine/threonine kinase 4##AK309169|STK4|6789|serine/threonine kinase 4##AK225326|STK4|6789|serine/threonine kinase 4##BC005231|STK4|6789|serine/threonine kinase 4##BC015332|STK4|6789|serine/threonine kinase 4##BC038850|STK4|6789|serine/threonine kinase 4##CR933633|STK4|6789|serine/threonine kinase 4##BC093768|STK4|6789|serine/threonine kinase 4##AY038181|WFDC5|149708|WAP four-disulfide core domain 5##BC039173|WFDC5|149708|WAP four-disulfide core domain 5##AY358822|WFDC5|149708|WAP four-disulfide core domain 5##NM_145652|WFDC5|149708|WAP four-disulfide core domain 5##AY358678|WFDC12|128488|WAP four-disulfide core domain 12##AY037803|WFDC12|128488|WAP four-disulfide core domain 12##NM_080869|WFDC12|128488|WAP four-disulfide core domain 12##NM_002638|PI3|5266|peptidase inhibitor 3, skin-derived##BC010952|PI3|5266|peptidase inhibitor 3, skin-derived##DQ892710|PI3|5266|peptidase inhibitor 3, skin-derived##DQ895962|PI3|5266|peptidase inhibitor 3, skin-derived##Z18538|PI3|5266|peptidase inhibitor 3, skin-derived##CR542234|PI3|5266|peptidase inhibitor 3, skin-derived	0.999676	CTCF.p2:12:1.000
chr2	63014647	63014759	reg1016104.p1	7.644	+	BC029477 NM_001142614	-80673	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	-81737	+	AK292545 NM_001142615	-113718	+	NM_001199770	262488	+	NM_014562 TSC_hg19_v1_chr2_+_63277964 AK095680 AK297308 BC007621	263262	+	TSC_hg19_v1_chr2_-_63815560 AK310290	800837	-	BC029477|EHBP1|23301|EH domain binding protein 1##NM_001142614|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##NM_001199770|OTX1|5013|orthodenticle homeobox 1##NM_014562|OTX1|5013|orthodenticle homeobox 1##AK095680|OTX1|5013|orthodenticle homeobox 1##AK297308|OTX1|5013|orthodenticle homeobox 1##BC007621|OTX1|5013|orthodenticle homeobox 1##AK310290|WDPCP|51057|WD repeat containing planar cell polarity effector	0.950722	CTCF.p2:-42:0.951
chr7	111495429	111495572	reg1019735.p1	7.644	+	TSC_hg19_v1_chr7_-_111428948 AK294820	-66489	-	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	-293016	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-764377	+	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	350765	-	TSC_hg19_v1_chr7_-_111846458 AK095906 AK309605 NM_014705	350962	-	AF209198 NM_021994 TSC_hg19_v1_chr7_+_111846702	351172	+	AK294820|DOCK4|9732|dedicator of cytokinesis 4##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4##AK095906|DOCK4|9732|dedicator of cytokinesis 4##AK309605|DOCK4|9732|dedicator of cytokinesis 4##NM_014705|DOCK4|9732|dedicator of cytokinesis 4##AF209198|ZNF277|11179|zinc finger protein 277##NM_021994|ZNF277|11179|zinc finger protein 277	0.904746	CTCF.p2:-1:0.905
chr7	19161740	19161856	reg1019184.p1	7.644	+	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	-4520	-	TSC_hg19_v1_chr7_+_18548965 AK304343	-612829	+	NM_001204147 NM_001204148 TSC_hg19_v1_chr7_+_18548932 AK304410	-612875	+	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	23215	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	586848	-	BX648384 NM_152774	650605	-	BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##AK304343|HDAC9|9734|histone deacetylase 9##NM_001204147|HDAC9|9734|histone deacetylase 9##NM_001204148|HDAC9|9734|histone deacetylase 9##AK304410|HDAC9|9734|histone deacetylase 9##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196	0.481553	CTCF.p2:13:0.482
chr13	75832420	75832563	reg1018193.p1	7.643	+	TSC_hg19_v1_chr13_-_74708425 AK291397	-1124095	-	AF161471 AF113122 NM_007249	-1124502	-	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-2199287	+	CR749622 TSC_hg19_v1_chr13_-_75901948	69431	-	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	223847	-	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	279487	-	AK291397|KLF12|11278|Kruppel-like factor 12##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##CR749622|TBC1D4|9882|TBC1 domain family, member 4##AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6	0.68146	CTCF.p2:10:0.681
chr15	45686106	45686251	reg1021115.p1	7.643	+	TSC_hg19_v1_chr15_-_45670958 NM_001482	-15211	-	TSC_hg19_v1_chr15_-_45670743 CU678590 S68805 BC004141 AK098055 AK223585 AK294995 AK298350	-15439	-	AK222709 NM_004212 U84392 AK291974	-141737	+	NM_024063 TSC_hg19_v1_chr15_+_45694551 AK291457 AK023232 AK225463 BC051861 BC000981 AK022348	8374	+	NM_032413 NM_197955 TSC_hg19_v1_chr15_+_45722808 AF228422 AK026298 BC021173 AB026707	36619	+	BC026089 NM_013309 TSC_hg19_v1_chr15_-_45815017	128832	-	NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK222709|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##NM_004212|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##U84392|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK291974|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##NM_024063|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK291457|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK023232|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK225463|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC051861|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC000981|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK022348|SPATA5L1|79029|spermatogenesis associated 5-like 1##NM_032413|C15orf48|84419|chromosome 15 open reading frame 48##NM_197955|C15orf48|84419|chromosome 15 open reading frame 48##AF228422|C15orf48|84419|chromosome 15 open reading frame 48##AK026298|C15orf48|84419|chromosome 15 open reading frame 48##BC021173|C15orf48|84419|chromosome 15 open reading frame 48##AB026707|C15orf48|84419|chromosome 15 open reading frame 48##BC026089|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##NM_013309|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4	0.519675	CTCF.p2:8:0.520
chr19	35797721	35797858	reg1017263.p1	7.643	+	NM_001199216 NM_002361 NM_080600 AK223562 BC093045 TSC_hg19_v1_chr19_+_35783063 BC034042 AK094545 AK222649 AK308976 M29273 AB209170 AK294644 AK222680 BC053347	-14747	+	AF309489 NM_021175 TSC_hg19_v1_chr19_+_35773430 AK096110 BC020612 AF131292 AY358669 AJ277280	-24364	+	AB528283 X90826 AY147880 CR536504 TSC_hg19_v1_chr19_+_35760006 AK297022	-37756	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	22302	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	44661	+	AK290710 NM_005304 BC035657	51705	+	NM_001199216|MAG|4099|myelin associated glycoprotein##NM_002361|MAG|4099|myelin associated glycoprotein##NM_080600|MAG|4099|myelin associated glycoprotein##AK223562|MAG|4099|myelin associated glycoprotein##BC093045|MAG|4099|myelin associated glycoprotein##BC034042|MAG|4099|myelin associated glycoprotein##AK094545|MAG|4099|myelin associated glycoprotein##AK222649|MAG|4099|myelin associated glycoprotein##AK308976|MAG|4099|myelin associated glycoprotein##M29273|MAG|4099|myelin associated glycoprotein##AK294644|MAG|4099|myelin associated glycoprotein##AK222680|MAG|4099|myelin associated glycoprotein##BC053347|MAG|4099|myelin associated glycoprotein##AF309489|HAMP|57817|hepcidin antimicrobial peptide##NM_021175|HAMP|57817|hepcidin antimicrobial peptide##AK096110|HAMP|57817|hepcidin antimicrobial peptide##BC020612|HAMP|57817|hepcidin antimicrobial peptide##AF131292|HAMP|57817|hepcidin antimicrobial peptide##AY358669|HAMP|57817|hepcidin antimicrobial peptide##AJ277280|HAMP|57817|hepcidin antimicrobial peptide##X90826|USF2|7392|upstream transcription factor 2, c-fos interacting##AY147880|USF2|7392|upstream transcription factor 2, c-fos interacting##CR536504|USF2|7392|upstream transcription factor 2, c-fos interacting##AK297022|USF2|7392|upstream transcription factor 2, c-fos interacting##NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3	0.993737	CTCF.p2:0:0.994
chr8	138855579	138855709	reg1018671.p2	7.643	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-2385443	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-2385986	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-3130370	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	653462	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	1070600	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	1859638	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.475928	CTCF.p2:9:0.389
chr20	43089579	43089716	reg1020360.p1	7.642	+	TSC_hg19_v1_chr20_+_43030005 AB463726 HQ692860 HQ692869 X76930 AB307703	-59625	+	BC137539 BC137540 TSC_hg19_v1_chr20_+_43029974	-59665	+	X87872 X87870 TSC_hg19_v1_chr20_+_43029954 X87871	-59701	+	TSC_hg19_v1_chr20_+_43104525 BC003071 NM_001039199 NM_024331 AK314045 CR936621	14900	+	CU675237 DQ896714 DQ893392 AK300618 AF112227 BC006088 TSC_hg19_v1_chr20_-_43150672	60985	-	TSC_hg19_v1_chr20_-_43150683 AF153979 U49188 AK222923	61031	-	HQ692860|HNF4A|3172|hepatocyte nuclear factor 4, alpha##HQ692869|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X76930|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AB307703|HNF4A|3172|hepatocyte nuclear factor 4, alpha##BC137539|HNF4A|3172|hepatocyte nuclear factor 4, alpha##BC137540|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87872|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87870|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87871|HNF4A|3172|hepatocyte nuclear factor 4, alpha##BC003071|TTPAL|79183|tocopherol (alpha) transfer protein-like##NM_001039199|TTPAL|79183|tocopherol (alpha) transfer protein-like##NM_024331|TTPAL|79183|tocopherol (alpha) transfer protein-like##AK314045|TTPAL|79183|tocopherol (alpha) transfer protein-like##CR936621|TTPAL|79183|tocopherol (alpha) transfer protein-like##DQ896714|SERINC3|10955|serine incorporator 3##DQ893392|SERINC3|10955|serine incorporator 3##AK300618|SERINC3|10955|serine incorporator 3##AF112227|SERINC3|10955|serine incorporator 3##BC006088|SERINC3|10955|serine incorporator 3##AF153979|SERINC3|10955|serine incorporator 3##U49188|SERINC3|10955|serine incorporator 3##AK222923|SERINC3|10955|serine incorporator 3	0.065724	
chr14	64194918	64195050	reg1018886.p2	7.641	+	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	-235	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	-86422	-	BX248008 NM_001008726	-86860	-	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	124711	+	NM_182913 AY061758 AK297874	485893	+	NM_182910	487687	+	AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##BX248008|WDR89|112840|WD repeat domain 89##NM_001008726|WDR89|112840|WD repeat domain 89##NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2	0.01664	
chr14	89802777	89802901	reg1016766.p2	7.641	+	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-511846	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-543629	-	NM_207662 BC027607 AF474376	-742086	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	75937	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	80571	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	282756	-	AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3	0.853253	CTCF.p2:-1:0.853
chr6	43741173	43741295	reg1016663.p1	7.641	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-2364	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-2700	+	TSC_hg19_v1_chr6_+_43738284 AF022375	-2987	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	227140	+	CR627460 TSC_hg19_v1_chr6_+_44094741	353464	+	TSC_hg19_v1_chr6_-_44095161 AK312086	353926	-	M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##AF022375|VEGFA|7422|vascular endothelial growth factor A##BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14	0.021059	
chrX	8717032	8717169	reg1017120.p2	7.641	+	TSC_hg19_v1_chrX_-_8700193 BC137426 BC137427 M97252 NM_000216 S60085	-16893	-	X60299 TSC_hg19_v1_chrX_-_8700155	-16957	-	AF167078 AF167080 NM_001001888	-284230	+	BC113449 BC143805 NM_001171186 BC112022 AF494343 NM_174951	52300	-	BC120955 BC120956 NM_205849	284002	-	TSC_hg19_v1_chrX_+_9431357 AK289409 NM_001139466 NM_001139467 NM_001139468 AK290962 BC032708	714247	+	BC137426|KAL1|3730|Kallmann syndrome 1 sequence##BC137427|KAL1|3730|Kallmann syndrome 1 sequence##M97252|KAL1|3730|Kallmann syndrome 1 sequence##NM_000216|KAL1|3730|Kallmann syndrome 1 sequence##S60085|KAL1|3730|Kallmann syndrome 1 sequence##X60299|KAL1|3730|Kallmann syndrome 1 sequence##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167080|VCX3B|425054|variable charge, X-linked 3B##NM_001001888|VCX3B|425054|variable charge, X-linked 3B##BC113449|FAM9A|171482|family with sequence similarity 9, member A##BC143805|FAM9A|171482|family with sequence similarity 9, member A##NM_001171186|FAM9A|171482|family with sequence similarity 9, member A##BC112022|FAM9A|171482|family with sequence similarity 9, member A##AF494343|FAM9A|171482|family with sequence similarity 9, member A##NM_174951|FAM9A|171482|family with sequence similarity 9, member A##BC120955|FAM9B|171483|family with sequence similarity 9, member B##BC120956|FAM9B|171483|family with sequence similarity 9, member B##NM_205849|FAM9B|171483|family with sequence similarity 9, member B##AK289409|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139466|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139467|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139468|TBL1X|6907|transducin (beta)-like 1X-linked##AK290962|TBL1X|6907|transducin (beta)-like 1X-linked##BC032708|TBL1X|6907|transducin (beta)-like 1X-linked	0.995648	CTCF.p2:-18:0.996
chr11	64972389	64972511	reg1015274.p1	7.640	+	TSC_hg19_v1_chr11_+_64949413 BC017200	-23011	+	TSC_hg19_v1_chr11_+_64949398 AK301538	-23049	+	TSC_hg19_v1_chr11_+_64949290 NM_005186 X04366 BC008751	-23135	+	AK131327 NM_001004326 BC146850	8864	+	TSC_hg19_v1_chr11_+_65029432 AK309284 BC001347 BC002990 BC018813 BC018814 NM_002689 AK297842 AK307831 AK025315	56956	+	NM_006779 TSC_hg19_v1_chr11_+_65082336 AF001436 AF163840 AK315444 BC075834	109887	+	BC017200|CAPN1|823|calpain 1, (mu/I) large subunit##AK301538|CAPN1|823|calpain 1, (mu/I) large subunit##NM_005186|CAPN1|823|calpain 1, (mu/I) large subunit##X04366|CAPN1|823|calpain 1, (mu/I) large subunit##BC008751|CAPN1|823|calpain 1, (mu/I) large subunit##AK131327|SLC22A20|440044|solute carrier family 22, member 20##NM_001004326|SLC22A20|440044|solute carrier family 22, member 20##BC146850|SLC22A20|440044|solute carrier family 22, member 20##AK309284|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC001347|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC002990|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018813|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018814|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_002689|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK297842|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK307831|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK025315|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_006779|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF001436|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF163840|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AK315444|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##BC075834|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2	1.306097	CTCF.p2:-34:1.000	CTCF.p2:49:0.306
chr20	388220	388401	reg1012575.p2	7.640	+	AJ697940 TSC_hg19_v1_chr20_+_361938 AK297546 AJ697937 AJ697938 AJ697939	-26348	+	TSC_hg19_v1_chr20_+_361708 BC019363	-26602	+	AY247738 NM_021158 TSC_hg19_v1_chr20_+_361483 AJ697936 AK026945 AK222837 BC027484	-26897	+	BC014116 TSC_hg19_v1_chr20_+_388711 NM_006462 NM_031229	393	+	TSC_hg19_v1_chr20_+_388727 BC016301 U67322	455	+	TSC_hg19_v1_chr20_+_388942 AK297524 AK309414	640	+	AK297546|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC019363|TRIB3|57761|tribbles homolog 3 (Drosophila)##AY247738|TRIB3|57761|tribbles homolog 3 (Drosophila)##NM_021158|TRIB3|57761|tribbles homolog 3 (Drosophila)##AJ697936|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK026945|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK222837|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC027484|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC014116|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##NM_006462|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##NM_031229|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##BC016301|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##U67322|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##AK297524|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##AK309414|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1	0.0	
chr22	17749458	17749590	reg1018688.p1	7.640	+	TSC_hg19_v1_chr22_-_17747522 AF277398	-1953	-	AK314321 TSC_hg19_v1_chr22_-_17700267 AK295174 AK292689	-49161	-	AF190746 NM_017424	-58746	-	TSC_hg19_v1_chr22_+_18043149 AJ428203 AY008285 NM_031481 BC031644 AK308974 AK095706 AK309110	293695	+	BT007128 CU012943 CU013231 EU831478 EU831565 AB528072 CR456385 X71491 TSC_hg19_v1_chr22_-_18111488 X76228 BC004443	361921	-	TSC_hg19_v1_chr22_-_18111509 AK312394	361982	-	AF277398|CECR3|27442|cat eye syndrome chromosome region, candidate 3 (non-protein coding)##AK314321|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK295174|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK292689|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF190746|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_017424|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AJ428203|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AY008285|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##NM_031481|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BC031644|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK308974|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK095706|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK309110|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BT007128|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU012943|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU013231|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831478|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831565|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CR456385|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X71491|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X76228|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##BC004443|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##AK312394|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1	0.829889	CTCF.p2:-7:0.830
chr4	39448693	39448816	reg1017549.p1	7.640	+	TSC_hg19_v1_chr4_+_39408557 BC104871 BC113653 BC143575	-40205	+	AB079373 NM_175737 TSC_hg19_v1_chr4_+_39408496	-40270	+	AF040250 BC035297 TSC_hg19_v1_chr4_-_39367983 BC051751 AK291612 BC010387 AJ564999 NM_001204747 NM_002913	-80802	-	AB529031 DQ892727 DQ892959 DQ895974 AB062431 BC004156 BC004206 BC031906 D14531 U21138 NM_001024921 BC100285 AY376242	11392	-	TSC_hg19_v1_chr4_-_39460503 BC000483	11758	-	AK130966 AK303908 AY320412 TSC_hg19_v1_chr4_-_39460532 AL832047 AY597415 AK312241 BC066318 U09953 AK297178 NM_000661	11794	-	BC104871|KLB|152831|klotho beta##BC113653|KLB|152831|klotho beta##BC143575|KLB|152831|klotho beta##AB079373|KLB|152831|klotho beta##NM_175737|KLB|152831|klotho beta##AF040250|RFC1|5981|replication factor C (activator 1) 1, 145kDa##BC035297|RFC1|5981|replication factor C (activator 1) 1, 145kDa##BC051751|RFC1|5981|replication factor C (activator 1) 1, 145kDa##AK291612|RFC1|5981|replication factor C (activator 1) 1, 145kDa##BC010387|RFC1|5981|replication factor C (activator 1) 1, 145kDa##AJ564999|RFC1|5981|replication factor C (activator 1) 1, 145kDa##NM_001204747|RFC1|5981|replication factor C (activator 1) 1, 145kDa##NM_002913|RFC1|5981|replication factor C (activator 1) 1, 145kDa##DQ892727|RPL9|6133|ribosomal protein L9##DQ892959|RPL9|6133|ribosomal protein L9##DQ895974|RPL9|6133|ribosomal protein L9##AB062431|RPL9|6133|ribosomal protein L9##BC004156|RPL9|6133|ribosomal protein L9##BC004206|RPL9|6133|ribosomal protein L9##BC031906|RPL9|6133|ribosomal protein L9##D14531|RPL9|6133|ribosomal protein L9##U21138|RPL9|6133|ribosomal protein L9##NM_001024921|RPL9|6133|ribosomal protein L9##BC100285|RPL9|6133|ribosomal protein L9##AY376242|RPL9|6133|ribosomal protein L9##BC000483|RPL9|6133|ribosomal protein L9##AK130966|RPL9|6133|ribosomal protein L9##AK303908|RPL9|6133|ribosomal protein L9##AY320412|RPL9|6133|ribosomal protein L9##AL832047|RPL9|6133|ribosomal protein L9##AY597415|RPL9|6133|ribosomal protein L9##AK312241|RPL9|6133|ribosomal protein L9##BC066318|RPL9|6133|ribosomal protein L9##U09953|RPL9|6133|ribosomal protein L9##AK297178|RPL9|6133|ribosomal protein L9##NM_000661|RPL9|6133|ribosomal protein L9	0.0	
chr10	111981469	111981649	reg1016265.p1	7.638	+	BC012907 NM_001008541	-11571	+	TSC_hg19_v1_chr10_+_111967381 BC035128 NM_130439	-14200	+	AK291488 TSC_hg19_v1_chr10_+_111767988 U37122 BC043143	-213592	+	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	4262	+	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	83034	-	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	83141	-	BC012907|MXI1|4601|MAX interactor 1##NM_001008541|MXI1|4601|MAX interactor 1##BC035128|MXI1|4601|MAX interactor 1##NM_130439|MXI1|4601|MAX interactor 1##AK291488|ADD3|120|adducin 3 (gamma)##U37122|ADD3|120|adducin 3 (gamma)##BC043143|ADD3|120|adducin 3 (gamma)##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1	0.399518	CTCF.p2:3:0.400
chr20	37278044	37278143	reg1016927.p1	7.638	+	TSC_hg19_v1_chr20_+_37230452 NM_001164431	-47580	+	BC029594 NM_001018082 BC119704 BC119705	-68253	+	TSC_hg19_v1_chr20_+_37101489 AB033045 BC047482 NM_020336 AK304242 CR936800	-176585	+	NM_080552 TSC_hg19_v1_chr20_+_37353115	75019	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	75066	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	99019	+	NM_001164431|ARHGAP40|343578|Rho GTPase activating protein 40##BC029594|ADIG|149685|adipogenin##NM_001018082|ADIG|149685|adipogenin##BC119704|ADIG|149685|adipogenin##BC119705|ADIG|149685|adipogenin##AB033045|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##BC047482|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##NM_020336|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##AK304242|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##CR936800|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##NM_080552|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)	0.853874	CTCF.p2:0:0.854
chr9	138593880	138594006	reg1020706.p1	7.638	+	AY884306 AY902244 BC031861 NM_001012415 NM_001101677	-2598	-	AB463839 AY301270 NM_001001676	-38776	+	AY336054 NM_182974	-62558	-	AK127272 NM_020822 AB037843 BC136618 BC144304 BC171770	101	+	TSC_hg19_v1_chr9_-_138799245 NM_015447	205218	-	CU678830 DQ892567 DQ895782 TSC_hg19_v1_chr9_-_138853062 BC011822	259096	-	AY884306|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##AY902244|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##BC031861|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##NM_001012415|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##NM_001101677|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##AY301270|LCN9|392399|lipocalin 9##NM_001001676|LCN9|392399|lipocalin 9##AY336054|GLT6D1|360203|glycosyltransferase 6 domain containing 1##NM_182974|GLT6D1|360203|glycosyltransferase 6 domain containing 1##AK127272|KCNT1|57582|potassium channel, subfamily T, member 1##NM_020822|KCNT1|57582|potassium channel, subfamily T, member 1##AB037843|KCNT1|57582|potassium channel, subfamily T, member 1##BC136618|KCNT1|57582|potassium channel, subfamily T, member 1##BC144304|KCNT1|57582|potassium channel, subfamily T, member 1##BC171770|KCNT1|57582|potassium channel, subfamily T, member 1##NM_015447|CAMSAP1|157922|calmodulin regulated spectrin-associated protein 1##DQ892567|UBAC1|10422|UBA domain containing 1##DQ895782|UBAC1|10422|UBA domain containing 1##BC011822|UBAC1|10422|UBA domain containing 1	0.982244	CTCF.p2:0:0.982
chr9	96776492	96776606	reg1019717.p1	7.638	+	TSC_hg19_v1_chr9_-_96717638 BC064363	-58910	-	TSC_hg19_v1_chr9_-_96717589 AF213356 NM_021570	-58967	-	TSC_hg19_v1_chr9_+_96339042 NM_005392 BC064613 AB014562 BC152437 AL834263	-437626	+	TSC_hg19_v1_chr9_+_96793094 AY171233 NM_177995 BC067120 NM_001253830 BC051654	16566	+	NM_001253829 NM_152422 TSC_hg19_v1_chr9_+_96846745 BC031279 AK310403 AK289692	70202	+	TSC_hg19_v1_chr9_+_96846806 AK124912	70265	+	BC064363|BARX1|56033|BARX homeobox 1##AF213356|BARX1|56033|BARX homeobox 1##NM_021570|BARX1|56033|BARX homeobox 1##NM_005392|PHF2|5253|PHD finger protein 2##BC064613|PHF2|5253|PHD finger protein 2##AB014562|PHF2|5253|PHD finger protein 2##BC152437|PHF2|5253|PHD finger protein 2##AL834263|PHF2|5253|PHD finger protein 2##AY171233|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_177995|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC067120|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253830|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC051654|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253829|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_152422|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC031279|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK310403|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK289692|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK124912|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	0.989201	CTCF.p2:-2:0.989
chr2	206540757	206540874	reg1019154.p1	7.637	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-1130096	+	TSC_hg19_v1_chr2_+_205410560 AX765687 AX765741 AK056157	-1130221	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	-1130325	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	6363	+	TSC_hg19_v1_chr2_+_206547371 AK290934	6546	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	410096	-	AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK056157|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AK290934|NRP2|8828|neuropilin 2##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D	0.106398	
chr6	88506318	88506499	reg1017571.p1	7.637	+	AK001204 NM_018064 TSC_hg19_v1_chr6_-_88411988	-94420	-	TSC_hg19_v1_chr6_-_88411949 AK222701	-94460	-	TSC_hg19_v1_chr6_-_88411885 BC000764 BC003042	-94499	-	BC029488 NM_030960 AF203447	251122	+	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	348628	-	NM_001160226 NM_001160258 NM_001160259 NM_016083	369358	-	AK001204|AKIRIN2|55122|akirin 2##NM_018064|AKIRIN2|55122|akirin 2##AK222701|AKIRIN2|55122|akirin 2##BC000764|AKIRIN2|55122|akirin 2##BC003042|AKIRIN2|55122|akirin 2##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)	0.0	
chr10	93056375	93056496	reg1016603.p1	7.636	+	TSC_hg19_v1_chr10_+_92980539 AL832496	-75901	+	TSC_hg19_v1_chr10_+_92980445 NM_032373	-76027	+	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	-133673	+	BC071762 TSC_hg19_v1_chr10_+_93170064	113623	+	TSC_hg19_v1_chr10_+_93170100 NM_173497 NM_182765 AK295723 AK094625 BC040187 EU832472 EU832551 BX537856	113746	+	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	336326	-	AL832496|PCGF5|84333|polycomb group ring finger 5##NM_032373|PCGF5|84333|polycomb group ring finger 5##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5##NM_173497|HECTD2|143279|HECT domain containing 2##NM_182765|HECTD2|143279|HECT domain containing 2##AK295723|HECTD2|143279|HECT domain containing 2##AK094625|HECTD2|143279|HECT domain containing 2##BC040187|HECTD2|143279|HECT domain containing 2##EU832472|HECTD2|143279|HECT domain containing 2##EU832551|HECTD2|143279|HECT domain containing 2##BX537856|HECTD2|143279|HECT domain containing 2##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C	0.0	
chr1	202821512	202821669	reg1018453.p2	7.636	+	AF087481 NM_006618 TSC_hg19_v1_chr1_-_202777550	-44030	-	TSC_hg19_v1_chr1_-_202777541 AJ132440	-44063	-	TSC_hg19_v1_chr1_-_202776401 AK122752	-45146	-	BC049825 TSC_hg19_v1_chr1_-_202830655 BC040684 AX721218	9092	-	AB464114 BT007133 U74324 TSC_hg19_v1_chr1_-_202858251 S78873 BC018488 BC037392 AK311900 AK223538 NM_002871	36714	-	TSC_hg19_v1_chr1_-_202896338 AF190900 AK223072 BC003183 BC004175	74743	-	AF087481|KDM5B|10765|lysine (K)-specific demethylase 5B##NM_006618|KDM5B|10765|lysine (K)-specific demethylase 5B##AJ132440|KDM5B|10765|lysine (K)-specific demethylase 5B##AK122752|KDM5B|10765|lysine (K)-specific demethylase 5B##BT007133|RABIF|5877|RAB interacting factor##U74324|RABIF|5877|RAB interacting factor##S78873|RABIF|5877|RAB interacting factor##BC018488|RABIF|5877|RAB interacting factor##BC037392|RABIF|5877|RAB interacting factor##AK311900|RABIF|5877|RAB interacting factor##AK223538|RABIF|5877|RAB interacting factor##NM_002871|RABIF|5877|RAB interacting factor##AF190900|KLHL12|59349|kelch-like 12 (Drosophila)##AK223072|KLHL12|59349|kelch-like 12 (Drosophila)##BC003183|KLHL12|59349|kelch-like 12 (Drosophila)##BC004175|KLHL12|59349|kelch-like 12 (Drosophila)	0.946161	CTCF.p2:19:0.946
chr5	149555235	149555343	reg1016705.p2	7.636	+	TSC_hg19_v1_chr5_+_149546340 NM_001804 AF239666 U51095 BC096249 BC096250 BC096251 BC096252 BC127122 AB463469	-8901	+	BC032224 AB209657 NM_002609 TSC_hg19_v1_chr5_-_149535428	-19865	-	J03278 M30493 TSC_hg19_v1_chr5_-_149535344	-19954	-	AK096607 NM_014228 TSC_hg19_v1_chr5_+_149569631 AK312309 AK308895	14295	+	TSC_hg19_v1_chr5_+_149569812 BC093785 BC113425 BC069631 HQ258340 S80071	14561	+	AB385410 EU832105 EU832199 AF145710 AF145711 AF091486 TSC_hg19_v1_chr5_-_149669337 BC040457 AB023185 AK308853	113998	-	NM_001804|CDX1|1044|caudal type homeobox 1##AF239666|CDX1|1044|caudal type homeobox 1##U51095|CDX1|1044|caudal type homeobox 1##BC096249|CDX1|1044|caudal type homeobox 1##BC096250|CDX1|1044|caudal type homeobox 1##BC096251|CDX1|1044|caudal type homeobox 1##BC096252|CDX1|1044|caudal type homeobox 1##BC127122|CDX1|1044|caudal type homeobox 1##BC032224|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AB209657|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##NM_002609|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##J03278|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##M30493|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AK096607|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##NM_014228|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK312309|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK308895|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##BC093785|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##BC113425|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##BC069631|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##HQ258340|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##S80071|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##EU832105|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##EU832199|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AF145710|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AF145711|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AF091486|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##BC040457|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AB023185|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AK308853|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha	0.893344	CTCF.p2:3:0.893
chr6	9413299	9413426	reg1017852.p1	7.636	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-977474	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-977654	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-1310572	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	999254	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	1001913	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	1002106	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.976817	CTCF.p2:22:0.977
chr5	149730200	149730340	reg1019432.p1	7.635	+	BC111002 AB448735 NM_001012301	-47785	-	AY875937 BC129995 BC129996 TSC_hg19_v1_chr5_-_149682021	-48292	-	TSC_hg19_v1_chr5_-_149669400 AK289776 NM_015981 NM_171825	-60868	-	NM_000356 NM_001008657 NM_001135243 NM_001135244 NM_001135245 NM_001195141 U40847 TSC_hg19_v1_chr5_+_149737276 U76366 AK225284 AK296918 AK303611 AK307586 BC011764 BC014559 BC033093 BC016144	6977	+	TSC_hg19_v1_chr5_+_149737296 AY460334 BC027252	7054	+	TSC_hg19_v1_chr5_-_149792315 AB590276 BT019505 CU676294 DQ892005 DQ895194 AK292076 AK297889 AK300669 AK308929 M28588 X00497 BC018726 BC024272	62033	-	BC111002|ARSI|340075|arylsulfatase family, member I##AB448735|ARSI|340075|arylsulfatase family, member I##NM_001012301|ARSI|340075|arylsulfatase family, member I##AY875937|ARSI|340075|arylsulfatase family, member I##BC129995|ARSI|340075|arylsulfatase family, member I##BC129996|ARSI|340075|arylsulfatase family, member I##AK289776|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##NM_015981|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##NM_171825|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##NM_000356|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##NM_001008657|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##NM_001135243|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##NM_001135244|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##NM_001135245|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##NM_001195141|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##U40847|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##U76366|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##AK225284|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##AK296918|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##AK303611|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##AK307586|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##BC011764|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##BC014559|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##BC033093|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##BC016144|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##AY460334|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##BC027252|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##BT019505|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##DQ892005|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##DQ895194|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AK292076|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AK297889|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AK300669|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AK308929|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##M28588|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##X00497|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##BC018726|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##BC024272|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	1.010948	CTCF.p2:-3:0.986
chr6	127860572	127860678	reg1017013.p1	7.635	+	NM_001012279	-20126	-	NM_014702	-80091	-	TSC_hg19_v1_chr6_-_127664710 AL834469 BC003549 AF220192 NM_001002030 NM_001105544 NM_001105545 NM_018479	-195903	-	AK303850 BC062712 NM_001010905	37693	+	AK292046 AK097903 BC144034 BC130516 NM_001010923 NM_001164685	361575	-	AK124031 NM_001164687	379133	-	NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174##NM_014702|KIAA0408|9729|KIAA0408##AL834469|ECHDC1|55862|enoyl CoA hydratase domain containing 1##BC003549|ECHDC1|55862|enoyl CoA hydratase domain containing 1##AF220192|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001002030|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001105544|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001105545|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_018479|ECHDC1|55862|enoyl CoA hydratase domain containing 1##AK303850|C6orf58|352999|chromosome 6 open reading frame 58##BC062712|C6orf58|352999|chromosome 6 open reading frame 58##NM_001010905|C6orf58|352999|chromosome 6 open reading frame 58##AK292046|THEMIS|387357|thymocyte selection associated##AK097903|THEMIS|387357|thymocyte selection associated##BC144034|THEMIS|387357|thymocyte selection associated##BC130516|THEMIS|387357|thymocyte selection associated##NM_001010923|THEMIS|387357|thymocyte selection associated##NM_001164685|THEMIS|387357|thymocyte selection associated##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated	0.914009	CTCF.p2:23:0.914
chr15	59825095	59825239	reg1021359.p1	7.634	+	TSC_hg19_v1_chr15_+_59730403 BC022537 NM_152450 AK299220 AK307975	-94817	+	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	-160097	-	TSC_hg19_v1_chr15_-_59665065 AK291688	-160101	-	TSC_hg19_v1_chr15_+_59903981 NM_004751 EF152283	78816	+	TSC_hg19_v1_chr15_+_59904093 BC017032	78939	+	TSC_hg19_v1_chr15_+_59908724 AF102542	83588	+	BC022537|FAM81A|145773|family with sequence similarity 81, member A##NM_152450|FAM81A|145773|family with sequence similarity 81, member A##AK299220|FAM81A|145773|family with sequence similarity 81, member A##AK307975|FAM81A|145773|family with sequence similarity 81, member A##BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##NM_004751|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##EF152283|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##BC017032|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type##AF102542|GCNT3|9245|glucosaminyl (N-acetyl) transferase 3, mucin type	0.0	
chr15	74358206	74358351	reg1004889.p1	7.634	+	TSC_hg19_v1_chr15_+_74287153 AB384942 CU674024 BT009911	-71122	+	TSC_hg19_v1_chr15_+_74287135 M79462 M79463 M79464 M80185 AB208950	-71139	+	TSC_hg19_v1_chr15_+_74287128 AK300256 AK300951	-71159	+	BC131515 AK292574 AF263742 NM_001038640	16602	-	AK092302 AX747465 AB040898 BC152429 NM_001130136	63428	+	AK309388 NM_001130137 BC028042	63714	+	BT009911|PML|5371|promyelocytic leukemia##M79462|PML|5371|promyelocytic leukemia##M79463|PML|5371|promyelocytic leukemia##M79464|PML|5371|promyelocytic leukemia##M80185|PML|5371|promyelocytic leukemia##AB208950|PML|5371|promyelocytic leukemia##AK300256|PML|5371|promyelocytic leukemia##BC131515|GOLGA6A|342096|golgin A6 family, member A##AK292574|GOLGA6A|342096|golgin A6 family, member A##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001038640|GOLGA6A|342096|golgin A6 family, member A##AK092302|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AB040898|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC152429|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130136|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130137|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC028042|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	0.999101	CTCF.p2:-4:0.999
chr6_cox_hap2	176491	176615	reg1019711.p1	7.634	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.033942	
chr10	35012855	35013000	reg1020736.p1	7.633	+	TSC_hg19_v1_chr10_-_33623996 BX648025	-1388929	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1389113	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	-1389474	-	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	91224	-	AK310225 AK300491 NM_001198778 NM_001198779	350285	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	366345	-	BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2	0.723565	CTCF.p2:-9:0.654
chr5	65056864	65056981	reg1018794.p2	7.633	+	TSC_hg19_v1_chr5_+_65018049 NM_020726 AK096416 AK292803 AJ300837 BC001644 BC004985 AB463138 CU674806 AB033052	-38826	+	TSC_hg19_v1_chr5_-_65017944 AK096321 BC012044 AF368281 NM_019072	-39000	-	BX641157 BC012006 TSC_hg19_v1_chr5_+_64920864 AK023673 BC142994	-136072	+	NM_001006600 NM_001253697 NM_001253698 NM_001253699 NM_001253701 NM_018695 AF263744 AK295708 TSC_hg19_v1_chr5_+_65222405 AK304693	165487	+	TSC_hg19_v1_chr5_+_65222508 AF276423 BC050692	165602	+	TSC_hg19_v1_chr5_+_65222567 BC126464 BC144075	165658	+	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)##AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)##AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)##AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)##BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)##BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)##AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)##AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)##AK096321|SGTB|54557|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta##BC012044|SGTB|54557|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta##AF368281|SGTB|54557|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta##NM_019072|SGTB|54557|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta##BX641157|C5orf44|80006|chromosome 5 open reading frame 44##BC012006|C5orf44|80006|chromosome 5 open reading frame 44##AK023673|C5orf44|80006|chromosome 5 open reading frame 44##BC142994|C5orf44|80006|chromosome 5 open reading frame 44##NM_001006600|ERBB2IP|55914|erbb2 interacting protein##NM_001253697|ERBB2IP|55914|erbb2 interacting protein##NM_001253698|ERBB2IP|55914|erbb2 interacting protein##NM_001253699|ERBB2IP|55914|erbb2 interacting protein##NM_001253701|ERBB2IP|55914|erbb2 interacting protein##NM_018695|ERBB2IP|55914|erbb2 interacting protein##AF263744|ERBB2IP|55914|erbb2 interacting protein##AK295708|ERBB2IP|55914|erbb2 interacting protein##AK304693|ERBB2IP|55914|erbb2 interacting protein##AF276423|ERBB2IP|55914|erbb2 interacting protein##BC050692|ERBB2IP|55914|erbb2 interacting protein##BC126464|ERBB2IP|55914|erbb2 interacting protein##BC144075|ERBB2IP|55914|erbb2 interacting protein	0.0	
chr13	109160742	109160857	reg1018420.p1	7.632	+	DQ857728 TSC_hg19_v1_chr13_+_108955871	-204982	+	TSC_hg19_v1_chr13_+_108922564 AY129227 AY129228	-238155	+	AY129226 TSC_hg19_v1_chr13_+_108922483	-238314	+	AB020672 BC146791 NM_015011 AL834447	87715	+	AB290159 AK127806 NM_001198950	120770	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	1278109	-	AY129227|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AY129228|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AY129226|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2	0.690285	CTCF.p2:2:0.690
chr3	73481718	73481864	reg1020669.p1	7.632	+	BC051316 BC064501 NM_018029	-370982	+	TSC_hg19_v1_chr3_+_73046081 AF327345 NM_174907 BC128136 BC128137	-435671	+	TSC_hg19_v1_chr3_+_73045984 BC110889	-435800	+	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	192247	-	AB384611 BC150608 NM_020872	1088511	-	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	2002358	-	BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene	0.98507	CTCF.p2:-8:0.985
chr4	143761784	143761916	reg1014836.p1	7.632	+	AK290619 NM_000585 NM_172175 BC018149 U14407	-1204084	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-1619764	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-1619795	+	NM_001101669 NM_003866	5753	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	344214	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	344275	+	AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38	0.906543	CTCF.p2:28:0.907
chr17	56277517	56277628	reg1019978.p1	7.631	+	TSC_hg19_v1_chr17_+_56270086 NM_000502 AB527137 X14346	-7399	+	AB463963 NM_001004707	-30557	+	BC136589 BC136595 NM_012374	-45069	+	TSC_hg19_v1_chr17_-_56296608 AK301020 BC010061 DQ185029 NM_017777	19054	-	AK310815 NM_001165927	19393	-	NM_001160102 NM_006151 TSC_hg19_v1_chr17_+_56315910 BC107166 BC107167 BX648309 AK303903 U39573 AK310965 AK300653 AK308378 AK131496 EF579964	38353	+	NM_000502|EPX|8288|eosinophil peroxidase##X14346|EPX|8288|eosinophil peroxidase##NM_001004707|OR4D2|124538|olfactory receptor, family 4, subfamily D, member 2##BC136589|OR4D1|26689|olfactory receptor, family 4, subfamily D, member 1##BC136595|OR4D1|26689|olfactory receptor, family 4, subfamily D, member 1##NM_012374|OR4D1|26689|olfactory receptor, family 4, subfamily D, member 1##AK301020|MKS1|54903|Meckel syndrome, type 1##BC010061|MKS1|54903|Meckel syndrome, type 1##DQ185029|MKS1|54903|Meckel syndrome, type 1##NM_017777|MKS1|54903|Meckel syndrome, type 1##AK310815|MKS1|54903|Meckel syndrome, type 1##NM_001165927|MKS1|54903|Meckel syndrome, type 1##NM_001160102|LPO|4025|lactoperoxidase##NM_006151|LPO|4025|lactoperoxidase##BC107166|LPO|4025|lactoperoxidase##BC107167|LPO|4025|lactoperoxidase##BX648309|LPO|4025|lactoperoxidase##AK303903|LPO|4025|lactoperoxidase##U39573|LPO|4025|lactoperoxidase##AK310965|LPO|4025|lactoperoxidase##AK300653|LPO|4025|lactoperoxidase##AK308378|LPO|4025|lactoperoxidase##AK131496|LPO|4025|lactoperoxidase##EF579964|LPO|4025|lactoperoxidase	0.996181	CTCF.p2:12:0.996
chr16	10615691	10615803	reg1018326.p2	7.630	+	NM_024997 BC137079 BC144468	-93007	+	AK093414 AX748112 TSC_hg19_v1_chr16_+_10479917 AK296565 AK299040 BC033891 BC041882	-135830	+	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	-339070	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	58743	-	HQ258441 BC130336 BC130338 AK057433 NM_144674	173018	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	221957	+	NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1	0.992283	CTCF.p2:-21:0.992
chr17	3505951	3506064	reg1017864.p2	7.630	+	AJ272063 NM_018727 AF196175	-5644	-	AF196176 NM_080705	-6883	-	BC132820 BC136633 AJ277028 NM_080706	-9861	-	AL136801 NM_080704	6697	-	TSC_hg19_v1_chr17_-_3539545 AB529118 CU676548 DQ891646 DQ894835 AK055609 AL832420 AK312428 AK298360 BC020543 AF163573 NM_013276	33492	-	NM_001031681 NM_004937 BC032850	33759	+	AJ272063|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##NM_018727|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##AF196175|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##AF196176|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##NM_080705|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##BC132820|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##BC136633|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##AJ277028|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##NM_080706|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##AL136801|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##NM_080704|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##DQ891646|SHPK|23729|sedoheptulokinase##DQ894835|SHPK|23729|sedoheptulokinase##AK055609|SHPK|23729|sedoheptulokinase##AL832420|SHPK|23729|sedoheptulokinase##AK312428|SHPK|23729|sedoheptulokinase##AK298360|SHPK|23729|sedoheptulokinase##BC020543|SHPK|23729|sedoheptulokinase##AF163573|SHPK|23729|sedoheptulokinase##NM_013276|SHPK|23729|sedoheptulokinase##NM_001031681|CTNS|1497|cystinosin, lysosomal cystine transporter##NM_004937|CTNS|1497|cystinosin, lysosomal cystine transporter##BC032850|CTNS|1497|cystinosin, lysosomal cystine transporter	0.985733	CTCF.p2:11:0.986
chr20	44427928	44428041	reg1019450.p1	7.630	+	TSC_hg19_v1_chr20_+_44420622 BC024290 CU692912	-7353	+	AK314003 TSC_hg19_v1_chr20_+_44420609	-7377	+	NM_052951 TSC_hg19_v1_chr20_+_44420592 AB035676	-7394	+	AK311949 NM_007019 NM_181799 NM_181800 NM_181802 NM_181803 BC050736 TSC_hg19_v1_chr20_+_44441282 BC016292 BC007656 U73379 BC028161	13297	+	BT007300 BT020165 BT020166 CR456988 DQ892416 DQ895630 EU831629 EU831714 TSC_hg19_v1_chr20_+_44441336	13355	+	NM_181801	13687	+	BC024290|DNTTIP1|116092|deoxynucleotidyltransferase, terminal, interacting protein 1##AK314003|DNTTIP1|116092|deoxynucleotidyltransferase, terminal, interacting protein 1##NM_052951|DNTTIP1|116092|deoxynucleotidyltransferase, terminal, interacting protein 1##AB035676|DNTTIP1|116092|deoxynucleotidyltransferase, terminal, interacting protein 1##AK311949|UBE2C|11065|ubiquitin-conjugating enzyme E2C##NM_007019|UBE2C|11065|ubiquitin-conjugating enzyme E2C##NM_181799|UBE2C|11065|ubiquitin-conjugating enzyme E2C##NM_181800|UBE2C|11065|ubiquitin-conjugating enzyme E2C##NM_181802|UBE2C|11065|ubiquitin-conjugating enzyme E2C##NM_181803|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BC050736|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BC016292|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BC007656|UBE2C|11065|ubiquitin-conjugating enzyme E2C##U73379|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BC028161|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BT007300|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BT020165|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BT020166|UBE2C|11065|ubiquitin-conjugating enzyme E2C##CR456988|UBE2C|11065|ubiquitin-conjugating enzyme E2C##DQ892416|UBE2C|11065|ubiquitin-conjugating enzyme E2C##DQ895630|UBE2C|11065|ubiquitin-conjugating enzyme E2C##EU831629|UBE2C|11065|ubiquitin-conjugating enzyme E2C##EU831714|UBE2C|11065|ubiquitin-conjugating enzyme E2C##NM_181801|UBE2C|11065|ubiquitin-conjugating enzyme E2C	0.948222	CTCF.p2:10:0.948
chr7	142334073	142334203	reg1021769.p1	7.630	+	AY358487 BC035384 AK122940 NM_001001317	-376277	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-522599	+	AF016833 NM_004668 BC120872	-638446	+	NM_001190487	39992	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	123188	+	M12426 TSC_hg19_v1_chr7_+_142495248	161057	+	AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	0.999247	CTCF.p2:-12:0.999
chr2	20293512	20293637	reg1018543.p1	7.629	+	NM_014713	-41786	-	TSC_hg19_v1_chr2_-_20251415 AY359028 D14696 BC003158 AK129875	-42147	-	CR456758 TSC_hg19_v1_chr2_-_20251382 BC000421 AK304433 BC093075	-42236	-	X60306 AB464260 CU679093 DQ893265 DQ896595 TSC_hg19_v1_chr2_-_20424892 AK299385 J05392 AK313974 AK222739 BC008765 AJ551176 AK311409 NM_002997	131213	-	TSC_hg19_v1_chr2_-_20425168 NM_001006946	131605	-	AF272350 TSC_hg19_v1_chr2_-_20512079	218475	-	NM_014713|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AY359028|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##D14696|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC003158|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK129875|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##CR456758|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC000421|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK304433|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC093075|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##X60306|SDC1|6382|syndecan 1##DQ893265|SDC1|6382|syndecan 1##DQ896595|SDC1|6382|syndecan 1##AK299385|SDC1|6382|syndecan 1##J05392|SDC1|6382|syndecan 1##AK313974|SDC1|6382|syndecan 1##AK222739|SDC1|6382|syndecan 1##BC008765|SDC1|6382|syndecan 1##AJ551176|SDC1|6382|syndecan 1##NM_002997|SDC1|6382|syndecan 1##NM_001006946|SDC1|6382|syndecan 1##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)	0.644308	CTCF.p2:3:0.644
chr3	75629471	75629576	reg1018123.p2	7.629	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	-145374	-	AB384611 BC150608 NM_020872	-1059221	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1955485	-	AK000525 NM_001124759	83960	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	91963	+	NM_001128223	204731	-	BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##NM_001128223|ZNF717|100131827|zinc finger protein 717	0.999894	CTCF.p2:0:1.000
chr9	90721441	90721554	reg1016966.p1	7.629	+	AF035013 AK291713 BX647489 TSC_hg19_v1_chr9_-_90589702 NM_001039803 NM_001170639 NM_001170640 NM_012119 NM_178432	-131850	-	AY904367 AX810715 BC002655 AX810688 AK298993 TSC_hg19_v1_chr9_-_90589450 AK296328 AK075325 AK294193 AK226135	-132088	-	NM_001145124 AK310310	-188619	+	AK302448 NM_001166137	28402	-	TSC_hg19_v1_chr9_+_91003366 NM_006717 BC013571 AL136719 AK092017 AX747313 AF087864 AF106682 AK290009	281836	+	TSC_hg19_v1_chr9_+_91003988 AK315854	282501	+	AF035013|CDK20|23552|cyclin-dependent kinase 20##AK291713|CDK20|23552|cyclin-dependent kinase 20##BX647489|CDK20|23552|cyclin-dependent kinase 20##NM_001039803|CDK20|23552|cyclin-dependent kinase 20##NM_001170639|CDK20|23552|cyclin-dependent kinase 20##NM_001170640|CDK20|23552|cyclin-dependent kinase 20##NM_012119|CDK20|23552|cyclin-dependent kinase 20##NM_178432|CDK20|23552|cyclin-dependent kinase 20##AY904367|CDK20|23552|cyclin-dependent kinase 20##BC002655|CDK20|23552|cyclin-dependent kinase 20##AK298993|CDK20|23552|cyclin-dependent kinase 20##AK296328|CDK20|23552|cyclin-dependent kinase 20##AK075325|CDK20|23552|cyclin-dependent kinase 20##AK294193|CDK20|23552|cyclin-dependent kinase 20##AK226135|CDK20|23552|cyclin-dependent kinase 20##NM_001145124|FAM75C1|441452|family with sequence similarity 75, member C1##AK302448|FAM75C2|645961|family with sequence similarity 75, member C2##NM_001166137|FAM75C2|645961|family with sequence similarity 75, member C2##NM_006717|SPIN1|10927|spindlin 1##BC013571|SPIN1|10927|spindlin 1##AL136719|SPIN1|10927|spindlin 1##AK092017|SPIN1|10927|spindlin 1##AF087864|SPIN1|10927|spindlin 1##AF106682|SPIN1|10927|spindlin 1##AK290009|SPIN1|10927|spindlin 1##AK315854|SPIN1|10927|spindlin 1	0.625176	CTCF.p2:14:0.625
chr1	120925543	120925668	reg1016734.p1	7.628	+	NM_001100910	-86601	+	TSC_hg19_v1_chr1_-_120612318 NM_001200001 NM_024408	-313290	-	TSC_hg19_v1_chr1_-_120612272 BC071562	-313339	-	L03419 L03420 TSC_hg19_v1_chr1_-_120935918 BC110416 AK308886	10304	-	AK291502 AK307244 AK311502 NM_001004340 NM_001017986 NM_001244910 TSC_hg19_v1_chr1_-_120935945	10347	-	CR936796 TSC_hg19_v1_chr1_+_142618815 AK056396 AF277188	21693241	+	NM_001100910|FAM72B|653820|family with sequence similarity 72, member B##NM_001200001|NOTCH2|4853|notch 2##NM_024408|NOTCH2|4853|notch 2##BC071562|NOTCH2|4853|notch 2##L03419|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##L03420|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##BC110416|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK308886|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK291502|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK307244|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK311502|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001004340|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001017986|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001244910|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)	0.998928	CTCF.p2:-11:0.999
chr11	95788164	95788306	reg1018437.p1	7.628	+	BC052990 BC012086 TSC_hg19_v1_chr11_-_95657272 BC034474 BX647997 NM_001243571 NM_016156 NM_201278 NM_201281 AB028996	-130879	-	AK293243 TSC_hg19_v1_chr11_-_95657092 AK302940 BC040432 AK291277	-131184	-	D42054 BC039711 BC029385 AB385276 AY225092 CU691748 TSC_hg19_v1_chr11_+_95523869	-264395	+	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	288168	-	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	334807	-	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	334939	+	BC052990|MTMR2|8898|myotubularin related protein 2##BC012086|MTMR2|8898|myotubularin related protein 2##BC034474|MTMR2|8898|myotubularin related protein 2##BX647997|MTMR2|8898|myotubularin related protein 2##NM_001243571|MTMR2|8898|myotubularin related protein 2##NM_016156|MTMR2|8898|myotubularin related protein 2##NM_201278|MTMR2|8898|myotubularin related protein 2##NM_201281|MTMR2|8898|myotubularin related protein 2##AB028996|MTMR2|8898|myotubularin related protein 2##AK293243|MTMR2|8898|myotubularin related protein 2##AK302940|MTMR2|8898|myotubularin related protein 2##BC040432|MTMR2|8898|myotubularin related protein 2##AK291277|MTMR2|8898|myotubularin related protein 2##D42054|CEP57|9702|centrosomal protein 57kDa##BC039711|CEP57|9702|centrosomal protein 57kDa##BC029385|CEP57|9702|centrosomal protein 57kDa##AY225092|CEP57|9702|centrosomal protein 57kDa##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)	0.766598	CTCF.p2:-27:0.767
chr5	34465543	34465652	reg1020217.p1	7.627	+	EU399231 EU399232 BC112925 AF329837 BC120990 AF326976 AY358388 AK075533 BX640995 AK315921 AK295968 NM_030945 NM_181435	-422295	-	TSC_hg19_v1_chr5_-_34008240 AK225749	-457353	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	-457434	-	TSC_hg19_v1_chr5_+_34656432 NM_001145522 NM_015577	190816	+	TSC_hg19_v1_chr5_+_34656506 BC052988 AF155135 AK314379	190915	+	AB037755 NM_001145520 TSC_hg19_v1_chr5_+_34656599	191000	+	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK225749|AMACR|23600|alpha-methylacyl-CoA racemase##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001145522|RAI14|26064|retinoic acid induced 14##NM_015577|RAI14|26064|retinoic acid induced 14##BC052988|RAI14|26064|retinoic acid induced 14##AF155135|RAI14|26064|retinoic acid induced 14##AK314379|RAI14|26064|retinoic acid induced 14##AB037755|RAI14|26064|retinoic acid induced 14##NM_001145520|RAI14|26064|retinoic acid induced 14	0.988385	CTCF.p2:0:0.988
chr6	46749328	46749438	reg1017502.p2	7.627	+	NM_001162435 AK304342	-34708	+	BC038452 NM_001168357	-45954	-	TSC_hg19_v1_chr6_-_46703124 AK297066 NM_005084	-46246	-	NM_005588 AK225212 TSC_hg19_v1_chr6_+_46761125 AK315246 AK315840 BC131714 AF478685 AK290282 M82962 BC143649 BC143650 BC143651	11728	+	TSC_hg19_v1_chr6_-_46825943 BC036002	76565	-	AL832125 AB018301 AK289503 AK092043 AX747330 NM_001098518	140283	-	NM_001162435|LOC100287718|100287718|uncharacterized LOC100287718##AK304342|LOC100287718|100287718|uncharacterized LOC100287718##BC038452|PLA2G7|7941|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)##NM_001168357|PLA2G7|7941|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)##AK297066|PLA2G7|7941|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)##NM_005084|PLA2G7|7941|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)##NM_005588|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AK225212|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AK315246|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AK315840|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC131714|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AF478685|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AK290282|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##M82962|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC143649|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC143650|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC143651|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC036002|GPR116|221395|G protein-coupled receptor 116##AL832125|GPR116|221395|G protein-coupled receptor 116##AB018301|GPR116|221395|G protein-coupled receptor 116##AK289503|GPR116|221395|G protein-coupled receptor 116##AK092043|GPR116|221395|G protein-coupled receptor 116##NM_001098518|GPR116|221395|G protein-coupled receptor 116	0.990018	CTCF.p2:8:0.990
chr7	90718815	90718947	reg1019540.p1	7.627	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	-379721	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	-380098	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	-493072	+	BC017719 TSC_hg19_v1_chr7_+_90893724	174820	+	TSC_hg19_v1_chr7_+_90893747 AB017363 NM_003505 AF072872 BC051271 AK314996	174995	+	TSC_hg19_v1_chr7_-_91509979 BC108648 AL832861 AK298469 AK313641 NM_006980 Y09615 AK222730 AK311568	791134	-	AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##BC017719|FZD1|8321|frizzled family receptor 1##AB017363|FZD1|8321|frizzled family receptor 1##NM_003505|FZD1|8321|frizzled family receptor 1##AF072872|FZD1|8321|frizzled family receptor 1##BC051271|FZD1|8321|frizzled family receptor 1##AK314996|FZD1|8321|frizzled family receptor 1##BC108648|MTERF|7978|mitochondrial transcription termination factor##AL832861|MTERF|7978|mitochondrial transcription termination factor##AK298469|MTERF|7978|mitochondrial transcription termination factor##AK313641|MTERF|7978|mitochondrial transcription termination factor##NM_006980|MTERF|7978|mitochondrial transcription termination factor##Y09615|MTERF|7978|mitochondrial transcription termination factor##AK222730|MTERF|7978|mitochondrial transcription termination factor	0.998856	CTCF.p2:-16:0.999
chr7	92722188	92722310	reg1018539.p1	7.627	+	TSC_hg19_v1_chr7_-_92465935 NM_001145306	-256315	-	AK313491 TSC_hg19_v1_chr7_-_92465884	-256351	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	-259029	-	AB095925 BC150249 AK122951 TSC_hg19_v1_chr7_-_92747292 BX647072 AF453311	25034	-	TSC_hg19_v1_chr7_-_92747328 BC065769 AF445355 NM_001193307 NM_017654	25077	-	AF474973 AY195582 AY195583 AY195584 AY195585 AY195586 AY195587 DQ068177 TSC_hg19_v1_chr7_-_92777683 AB095926 NM_152703	55421	-	NM_001145306|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AB095925|SAMD9|54809|sterile alpha motif domain containing 9##BC150249|SAMD9|54809|sterile alpha motif domain containing 9##AK122951|SAMD9|54809|sterile alpha motif domain containing 9##BX647072|SAMD9|54809|sterile alpha motif domain containing 9##AF453311|SAMD9|54809|sterile alpha motif domain containing 9##BC065769|SAMD9|54809|sterile alpha motif domain containing 9##AF445355|SAMD9|54809|sterile alpha motif domain containing 9##NM_001193307|SAMD9|54809|sterile alpha motif domain containing 9##NM_017654|SAMD9|54809|sterile alpha motif domain containing 9##AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like##DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like##AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like##NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like	0.0	
chr13	27913078	27913192	reg1019253.p1	7.626	+	TSC_hg19_v1_chr13_+_27844966 HQ258126	-68128	+	AY439004 NM_206827	-68672	+	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	-87393	+	BC143711 D32257 NM_002097 TSC_hg19_v1_chr13_+_27998761 AB590496 U14134 U20272	85636	+	TSC_hg19_v1_chr13_-_28024327 BC039599 NM_001166262 NM_001166261	111174	-	AF265440 TSC_hg19_v1_chr13_-_28024702 BC046166 NM_001166263 NM_152912	111587	-	HQ258126|RASL11A|387496|RAS-like, family 11, member A##AY439004|RASL11A|387496|RAS-like, family 11, member A##NM_206827|RASL11A|387496|RAS-like, family 11, member A##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21##BC143711|GTF3A|2971|general transcription factor IIIA##D32257|GTF3A|2971|general transcription factor IIIA##NM_002097|GTF3A|2971|general transcription factor IIIA##U14134|GTF3A|2971|general transcription factor IIIA##U20272|GTF3A|2971|general transcription factor IIIA##BC039599|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166262|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166261|MTIF3|219402|mitochondrial translational initiation factor 3##BC046166|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166263|MTIF3|219402|mitochondrial translational initiation factor 3##NM_152912|MTIF3|219402|mitochondrial translational initiation factor 3	0.083802	
chr14	60099205	60099342	reg1022357.p1	7.626	+	AK290534 NM_206852 TSC_hg19_v1_chr14_-_60097533	-1740	-	TSC_hg19_v1_chr14_-_60097342 BC000314 BC003003 AK297492	-1929	-	CR457030 L10335 TSC_hg19_v1_chr14_-_60097308	-2008	-	AB587373 TSC_hg19_v1_chr14_-_60337495 BC111694 L10333 BC090862 BC068510 NM_021136	238180	-	NM_022495 TSC_hg19_v1_chr14_+_60558640 AK095489	459554	+	AY359031 TSC_hg19_v1_chr14_-_60632031 BC000637	532759	-	AK290534|RTN1|6252|reticulon 1##NM_206852|RTN1|6252|reticulon 1##BC000314|RTN1|6252|reticulon 1##BC003003|RTN1|6252|reticulon 1##AK297492|RTN1|6252|reticulon 1##CR457030|RTN1|6252|reticulon 1##L10335|RTN1|6252|reticulon 1##BC111694|RTN1|6252|reticulon 1##L10333|RTN1|6252|reticulon 1##BC090862|RTN1|6252|reticulon 1##BC068510|RTN1|6252|reticulon 1##NM_021136|RTN1|6252|reticulon 1##NM_022495|C14orf135|64430|chromosome 14 open reading frame 135##AK095489|C14orf135|64430|chromosome 14 open reading frame 135##AY359031|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC000637|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7	1.510892	CTCF.p2:-8:0.992	CTCF.p2:44:0.519
chr20	25277925	25278106	reg1018416.p3	7.625	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	-49257	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	-101535	+	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	-101645	+	CU680756 AK075023 AK290815 AK293495 TSC_hg19_v1_chr20_-_25371426	93370	-	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	93511	-	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	110307	+	NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK075023|ABHD12|26090|abhydrolase domain containing 12##AK290815|ABHD12|26090|abhydrolase domain containing 12##AK293495|ABHD12|26090|abhydrolase domain containing 12##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	0.0	
chr4	135391808	135391931	reg1017947.p1	7.625	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-268951	-	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	-1318586	+	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	-1321413	+	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	3061723	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	3061773	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	3771495	-	NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	0.971836	CTCF.p2:0:0.972
chr7	112055063	112055211	reg1017884.p1	7.625	+	TSC_hg19_v1_chr7_+_111846750 AL713791 AK314630 BC020626 AK027128 AF308819 CU676586	-208367	+	AF209198 NM_021994 TSC_hg19_v1_chr7_+_111846702	-208465	+	TSC_hg19_v1_chr7_-_111846458 AK095906 AK309605 NM_014705	-208675	-	TSC_hg19_v1_chr7_+_112063228 AK313211 NM_001007245 NM_001197080 AK315967 AK308066	8055	+	TSC_hg19_v1_chr7_+_112090514 NM_001550 AK225222 BC001272 Y10313 AK297509 AB527574 BT019889 BT019890 CU674634	35466	+	NM_001197079	36975	+	AL713791|ZNF277|11179|zinc finger protein 277##AK314630|ZNF277|11179|zinc finger protein 277##BC020626|ZNF277|11179|zinc finger protein 277##AK027128|ZNF277|11179|zinc finger protein 277##AF308819|ZNF277|11179|zinc finger protein 277##AF209198|ZNF277|11179|zinc finger protein 277##NM_021994|ZNF277|11179|zinc finger protein 277##AK095906|DOCK4|9732|dedicator of cytokinesis 4##AK309605|DOCK4|9732|dedicator of cytokinesis 4##NM_014705|DOCK4|9732|dedicator of cytokinesis 4##AK313211|IFRD1|3475|interferon-related developmental regulator 1##NM_001007245|IFRD1|3475|interferon-related developmental regulator 1##NM_001197080|IFRD1|3475|interferon-related developmental regulator 1##AK315967|IFRD1|3475|interferon-related developmental regulator 1##AK308066|IFRD1|3475|interferon-related developmental regulator 1##NM_001550|IFRD1|3475|interferon-related developmental regulator 1##AK225222|IFRD1|3475|interferon-related developmental regulator 1##BC001272|IFRD1|3475|interferon-related developmental regulator 1##AK297509|IFRD1|3475|interferon-related developmental regulator 1##BT019889|IFRD1|3475|interferon-related developmental regulator 1##BT019890|IFRD1|3475|interferon-related developmental regulator 1##NM_001197079|IFRD1|3475|interferon-related developmental regulator 1	0.995183	CTCF.p2:-3:0.995
chr14	21572744	21572850	reg1017766.p1	7.623	+	AK056849 TSC_hg19_v1_chr14_-_21572428	-396	-	AK225811 AK290700 NM_001101672	-5677	-	NM_001146683	-5702	+	TSC_hg19_v1_chr14_-_21572798 NM_001102454	28	-	NM_001004731 BC137304 BC137305	51405	-	M16342 BC108658 BX247992 BC089438 BC008364 TSC_hg19_v1_chr14_-_21737587 BC003394 BC071943 BX247961 M29063 AB209527 AK223517 BC066932 AK298906 AK312382 D28382 AK297482 AK299923 AK312338 BC103758 AK292619 BC007052 BC008423 AL833432 BC092433 AK225032 AK302213 NM_001077442 NM_001077443 NM_004500 NM_031314	164774	-	AK225811|ZNF219|51222|zinc finger protein 219##AK290700|ZNF219|51222|zinc finger protein 219##NM_001101672|ZNF219|51222|zinc finger protein 219##NM_001146683|C14orf176|643382|chromosome 14 open reading frame 176##NM_001102454|ZNF219|51222|zinc finger protein 219##NM_001004731|OR5AU1|390445|olfactory receptor, family 5, subfamily AU, member 1##BC137304|OR5AU1|390445|olfactory receptor, family 5, subfamily AU, member 1##BC137305|OR5AU1|390445|olfactory receptor, family 5, subfamily AU, member 1##M16342|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC108658|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BX247992|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC089438|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC008364|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC003394|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC071943|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BX247961|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##M29063|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AB209527|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK223517|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC066932|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK298906|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK312382|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##D28382|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK297482|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK299923|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK312338|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC103758|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK292619|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC007052|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC008423|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AL833432|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC092433|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK225032|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK302213|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_001077442|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_001077443|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_004500|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_031314|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)	0.0	
chr2	236502810	236502937	reg1017690.p1	7.623	+	TSC_hg19_v1_chr2_+_236403297 AB384114 AF413078	-99563	+	TSC_hg19_v1_chr2_+_236402950 BC140856	-99896	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	-100070	+	AK311262 TSC_hg19_v1_chr2_-_237076045	573141	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	573759	-	NM_212556 BX647589	670121	-	AF413078|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18	0.999014	CTCF.p2:9:0.999
chr9	136055429	136055551	reg1018973.p2	7.623	+	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	-16193	-	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	-30804	-	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	-58991	-	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	29130	-	AF134412 AF134413 AF134414 AF134415 AF134416 BC069595 BC069605 BC069814 BC111575 DQ139865 FR691751 FR691752 J05175 JN791441 CU686922 AK302203 TSC_hg19_v1_chr9_-_136150618	95124	-	NM_020469 TSC_hg19_v1_chr9_-_136150638	95147	-	AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B##AF134412|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134413|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134414|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134415|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134416|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069595|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069605|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069814|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC111575|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##DQ139865|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691751|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691752|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##J05175|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##JN791441|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AK302203|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##NM_020469|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)	0.9874	CTCF.p2:-3:0.987
chrY	234245	234397	reg1013237.p1	7.623	+	NM_018390 BC064136 BC005028 BC000888 BC032072	-86214	+	None	None	None	None	None	None	AK293506 NM_013239	63368	-	NM_000451 NM_006883 U89331	300757	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	1047263	-	NM_018390|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC064136|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC005028|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC000888|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC032072|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##AK293506|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_013239|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_000451|SHOX|6473|short stature homeobox##NM_006883|SHOX|6473|short stature homeobox##U89331|SHOX|6473|short stature homeobox##AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2	0.151322	
chr9	88313375	88313487	reg1015247.p1	7.622	+	U12140 TSC_hg19_v1_chr9_+_87285349	-1028099	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-1028679	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-1028735	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	43440	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	242643	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	242747	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.975562	CTCF.p2:-7:0.976
chr10	102921629	102921753	reg1019159.p1	7.621	+	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-30513	+	BC019674 NM_001085398	-30789	-	TSC_hg19_v1_chr10_+_102821745 BC007758 AY359087 AK225949 AK172862	-100032	+	BC136321 BC069156 NM_006562 X90828	67011	-	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	192181	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	426238	-	BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##BC007758|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AY359087|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK225949|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172862|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda	0.994442	CTCF.p2:-7:0.994
chr18	47814012	47814192	reg1016668.p1	7.621	+	TSC_hg19_v1_chr18_-_47814047 BC002504 BC014940	-66	-	BC015733 AL136862 TSC_hg19_v1_chr18_-_47814017 BC009188	-90	-	AK225889 TSC_hg19_v1_chr18_-_47808140 AK300759 NM_001204143 AK291519 NM_001204136 NM_001204137 NM_001204138 NM_001204139 NM_001204140 NM_001204141 NM_001204142 NM_002384 NM_015844 NM_015845 NM_015846 NM_015847	-5990	-	AB031069 AF149758 AK314886 TSC_hg19_v1_chr18_-_47814205 AK294645	105	-	BX647189 NM_001101654 NM_014593	589	-	TSC_hg19_v1_chr18_+_47901415 NM_001039535 NM_145060 BC015706 AK313968 AK303464	87295	+	BC002504|CXXC1|30827|CXXC finger protein 1##BC014940|CXXC1|30827|CXXC finger protein 1##BC015733|CXXC1|30827|CXXC finger protein 1##AL136862|CXXC1|30827|CXXC finger protein 1##BC009188|CXXC1|30827|CXXC finger protein 1##AK225889|MBD1|4152|methyl-CpG binding domain protein 1##AK300759|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204143|MBD1|4152|methyl-CpG binding domain protein 1##AK291519|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204136|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204137|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204138|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204139|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204140|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204141|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204142|MBD1|4152|methyl-CpG binding domain protein 1##NM_002384|MBD1|4152|methyl-CpG binding domain protein 1##NM_015844|MBD1|4152|methyl-CpG binding domain protein 1##NM_015845|MBD1|4152|methyl-CpG binding domain protein 1##NM_015846|MBD1|4152|methyl-CpG binding domain protein 1##NM_015847|MBD1|4152|methyl-CpG binding domain protein 1##AB031069|CXXC1|30827|CXXC finger protein 1##AF149758|CXXC1|30827|CXXC finger protein 1##AK314886|CXXC1|30827|CXXC finger protein 1##AK294645|CXXC1|30827|CXXC finger protein 1##BX647189|CXXC1|30827|CXXC finger protein 1##NM_001101654|CXXC1|30827|CXXC finger protein 1##NM_014593|CXXC1|30827|CXXC finger protein 1##NM_001039535|SKA1|220134|spindle and kinetochore associated complex subunit 1##NM_145060|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC015706|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK313968|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK303464|SKA1|220134|spindle and kinetochore associated complex subunit 1	0.066736	
chr4	83643120	83643214	reg1014167.p1	7.621	+	AK301116 BC147019 BC147027 NM_001080506 AK297512	-160053	-	TSC_hg19_v1_chr4_+_83351969 AB528563 CR457141	-291198	+	TSC_hg19_v1_chr4_+_83351769 AK022656 BC065815 BC001317	-291378	+	TSC_hg19_v1_chr4_-_83719926 BC004936 BC137429 BC137432 AF389338 AK024685 NM_001037582 NM_024906	76822	-	TSC_hg19_v1_chr4_-_83812296 BC084583 AB018358 AB018359 BC031292 AK225934 BC143489 BC117221 BC143491 BC143492	169118	-	AK002161 CR933696 TSC_hg19_v1_chr4_-_83812319	169145	-	AK301116|TMEM150C|441027|transmembrane protein 150C##BC147019|TMEM150C|441027|transmembrane protein 150C##BC147027|TMEM150C|441027|transmembrane protein 150C##NM_001080506|TMEM150C|441027|transmembrane protein 150C##AK297512|TMEM150C|441027|transmembrane protein 150C##CR457141|ENOPH1|58478|enolase-phosphatase 1##AK022656|ENOPH1|58478|enolase-phosphatase 1##BC065815|ENOPH1|58478|enolase-phosphatase 1##BC001317|ENOPH1|58478|enolase-phosphatase 1##BC004936|SCD5|79966|stearoyl-CoA desaturase 5##BC137429|SCD5|79966|stearoyl-CoA desaturase 5##BC137432|SCD5|79966|stearoyl-CoA desaturase 5##AF389338|SCD5|79966|stearoyl-CoA desaturase 5##AK024685|SCD5|79966|stearoyl-CoA desaturase 5##NM_001037582|SCD5|79966|stearoyl-CoA desaturase 5##NM_024906|SCD5|79966|stearoyl-CoA desaturase 5##BC084583|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AB018358|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AB018359|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC031292|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK225934|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143489|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC117221|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143491|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143492|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK002161|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##CR933696|SEC31A|22872|SEC31 homolog A (S. cerevisiae)	0.662884	CTCF.p2:3:0.663
chr5	52466725	52466844	reg1016699.p1	7.621	+	TSC_hg19_v1_chr5_-_52405588 BC029287 AF091871 AF117815 AK312887 NM_176806 BC095417	-61188	-	BC046097 AF155659 NM_004531	-61479	-	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	-181664	+	NM_006350 NM_013409 TSC_hg19_v1_chr5_+_52776278	309493	+	TSC_hg19_v1_chr5_+_52776409 BC004107	309628	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	309766	+	BC029287|MOCS2|4338|molybdenum cofactor synthesis 2##AF091871|MOCS2|4338|molybdenum cofactor synthesis 2##AF117815|MOCS2|4338|molybdenum cofactor synthesis 2##AK312887|MOCS2|4338|molybdenum cofactor synthesis 2##NM_176806|MOCS2|4338|molybdenum cofactor synthesis 2##BC095417|MOCS2|4338|molybdenum cofactor synthesis 2##BC046097|MOCS2|4338|molybdenum cofactor synthesis 2##AF155659|MOCS2|4338|molybdenum cofactor synthesis 2##NM_004531|MOCS2|4338|molybdenum cofactor synthesis 2##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##NM_006350|FST|10468|follistatin##NM_013409|FST|10468|follistatin##BC004107|FST|10468|follistatin##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin	0.135667	
chr1	156696528	156696629	reg1007464.p3	7.620	+	BT019827 CR450357 DQ892265 DQ896851 M68867 BC001109 AB593017 AK312007 TSC_hg19_v1_chr1_-_156675376 NM_001878 NM_001199723	-21156	-	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	-49433	-	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	-84624	+	AY391837 AK022733 NM_030980	1090	-	TSC_hg19_v1_chr1_-_156698238 BC000575 AK095697	1649	-	TSC_hg19_v1_chr1_+_156698260 NM_001142560 NM_015997	1678	+	BT019827|CRABP2|1382|cellular retinoic acid binding protein 2##CR450357|CRABP2|1382|cellular retinoic acid binding protein 2##DQ892265|CRABP2|1382|cellular retinoic acid binding protein 2##DQ896851|CRABP2|1382|cellular retinoic acid binding protein 2##M68867|CRABP2|1382|cellular retinoic acid binding protein 2##BC001109|CRABP2|1382|cellular retinoic acid binding protein 2##AB593017|CRABP2|1382|cellular retinoic acid binding protein 2##AK312007|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001878|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001199723|CRABP2|1382|cellular retinoic acid binding protein 2##BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##AY391837|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK022733|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_030980|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##BC000575|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK095697|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_001142560|RRNAD1|51093|ribosomal RNA adenine dimethylase domain containing 1##NM_015997|RRNAD1|51093|ribosomal RNA adenine dimethylase domain containing 1	0.0	
chr4	56212735	56212840	reg1017590.p1	7.620	+	TSC_hg19_v1_chr4_+_56212475 CU677982 CR457312	-303	+	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	-371	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	-221033	-	TSC_hg19_v1_chr4_+_56261819 AK123358	49008	+	TSC_hg19_v1_chr4_+_56262094 NM_018475	49288	+	TSC_hg19_v1_chr4_+_56262123 BC107582 AK290663 AK295289 BC104978 BC104980 AF132746 AF183409	49451	+	CR457312|SRD5A3|79644|steroid 5 alpha-reductase 3##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_018475|TMEM165|55858|transmembrane protein 165##BC107582|TMEM165|55858|transmembrane protein 165##AK290663|TMEM165|55858|transmembrane protein 165##AK295289|TMEM165|55858|transmembrane protein 165##BC104978|TMEM165|55858|transmembrane protein 165##BC104980|TMEM165|55858|transmembrane protein 165##AF132746|TMEM165|55858|transmembrane protein 165##AF183409|TMEM165|55858|transmembrane protein 165	0.999786	CTCF.p2:15:1.000
chrX	75473960	75474101	reg1021689.p1	7.620	+	TSC_hg19_v1_chrX_+_75392955 CU674612	-81075	+	AY927529 AY927616 BC001220 NM_016500 TSC_hg19_v1_chrX_+_75392896 AF151079 BC051894	-81191	+	BC093964 BC111949 AF490509 AK094624 NM_138703	-469002	-	NM_020932 TSC_hg19_v1_chrX_+_75648083 AB046807 AF490507 AK291270 BC050588	174074	+	AK297183 TSC_hg19_v1_chrX_-_76814315	1340236	-	L33812 TSC_hg19_v1_chrX_-_76937201	1463149	-	AY927616|CXorf26|51260|chromosome X open reading frame 26##BC001220|CXorf26|51260|chromosome X open reading frame 26##NM_016500|CXorf26|51260|chromosome X open reading frame 26##BC051894|CXorf26|51260|chromosome X open reading frame 26##BC093964|MAGEE2|139599|melanoma antigen family E, 2##BC111949|MAGEE2|139599|melanoma antigen family E, 2##AF490509|MAGEE2|139599|melanoma antigen family E, 2##AK094624|MAGEE2|139599|melanoma antigen family E, 2##NM_138703|MAGEE2|139599|melanoma antigen family E, 2##NM_020932|MAGEE1|57692|melanoma antigen family E, 1##AB046807|MAGEE1|57692|melanoma antigen family E, 1##AF490507|MAGEE1|57692|melanoma antigen family E, 1##AK291270|MAGEE1|57692|melanoma antigen family E, 1##BC050588|MAGEE1|57692|melanoma antigen family E, 1##AK297183|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##L33812|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	0.898268	CTCF.p2:4:0.898
chr1	217920644	217920765	reg1018877.p2	7.619	+	AY963797 AK310291 AK098591 BC014608 NM_138796 TSC_hg19_v1_chr1_+_217804714 EU832110 EU832204	-116011	+	AB527654 CU687736 BC042193 TSC_hg19_v1_chr1_-_217804402 BC063474 AK001114 AK291238 NM_018040 BC027719	-116322	-	CR749497 BX647076 NM_001134285	-609609	-	NM_016052 TSC_hg19_v1_chr1_+_218458635	537928	+	AK290066 BC003668 TSC_hg19_v1_chr1_+_218458652 BC020641 AF151873	537965	+	NM_001135599 NM_003238 TSC_hg19_v1_chr1_+_218518677 AB209842	598007	+	AY963797|SPATA17|128153|spermatogenesis associated 17##AK310291|SPATA17|128153|spermatogenesis associated 17##AK098591|SPATA17|128153|spermatogenesis associated 17##BC014608|SPATA17|128153|spermatogenesis associated 17##NM_138796|SPATA17|128153|spermatogenesis associated 17##EU832110|SPATA17|128153|spermatogenesis associated 17##EU832204|SPATA17|128153|spermatogenesis associated 17##BC042193|GPATCH2|55105|G patch domain containing 2##BC063474|GPATCH2|55105|G patch domain containing 2##AK001114|GPATCH2|55105|G patch domain containing 2##AK291238|GPATCH2|55105|G patch domain containing 2##NM_018040|GPATCH2|55105|G patch domain containing 2##BC027719|GPATCH2|55105|G patch domain containing 2##CR749497|ESRRG|2104|estrogen-related receptor gamma##BX647076|ESRRG|2104|estrogen-related receptor gamma##NM_001134285|ESRRG|2104|estrogen-related receptor gamma##NM_016052|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AK290066|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC003668|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC020641|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AF151873|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##NM_001135599|TGFB2|7042|transforming growth factor, beta 2##NM_003238|TGFB2|7042|transforming growth factor, beta 2##AB209842|TGFB2|7042|transforming growth factor, beta 2	0.882807	CTCF.p2:5:0.883
chr21	38382285	38382409	reg1016817.p2	7.619	+	AB463579 TSC_hg19_v1_chr21_+_38379101	-3262	+	AB037158 NM_018962	-3485	+	TSC_hg19_v1_chr21_-_38362512 BC060787 D23672 NM_000411	-19667	-	AB039659 BT007053 AK316609 AK026311 AK314457 AB037163 AB035745 AF237812 AK304656 NM_153681 AB035744 TSC_hg19_v1_chr21_-_38445363 AB037164 AB035743 BC005180 BC011007 AF216305	62747	-	AB035742 AB037162 TSC_hg19_v1_chr21_-_38445400 NM_153682	63076	-	TSC_hg19_v1_chr21_+_38445570 AK297921 BC092466 NM_001001894 AK291992 AK299991	63270	+	AB037158|DSCR6|53820|Down syndrome critical region gene 6##NM_018962|DSCR6|53820|Down syndrome critical region gene 6##BC060787|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##D23672|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_000411|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##AB039659|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##BT007053|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AK316609|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AK026311|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AK314457|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB037163|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB035745|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AF237812|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AK304656|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##NM_153681|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB035744|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB037164|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB035743|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##BC005180|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##BC011007|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AF216305|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB035742|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB037162|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##NM_153682|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AK297921|TTC3|7267|tetratricopeptide repeat domain 3##BC092466|TTC3|7267|tetratricopeptide repeat domain 3##NM_001001894|TTC3|7267|tetratricopeptide repeat domain 3##AK291992|TTC3|7267|tetratricopeptide repeat domain 3##AK299991|TTC3|7267|tetratricopeptide repeat domain 3	0.0	
chr4	73887498	73887599	reg1018457.p1	7.619	+	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	-453057	-	AK290937 NM_001144756 NM_053036 AF236083	-982678	+	AF119815 NM_004885 AK308069 AJ311393	-989979	+	BC101684 BC143642 TSC_hg19_v1_chr4_-_73935431 AK096310 AY957564 AY957565 BC071812 NM_173827	47895	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	201231	-	TSC_hg19_v1_chr4_-_74124365 AB527094	236811	-	AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AK290937|NPFFR2|10886|neuropeptide FF receptor 2##NM_001144756|NPFFR2|10886|neuropeptide FF receptor 2##NM_053036|NPFFR2|10886|neuropeptide FF receptor 2##AF236083|NPFFR2|10886|neuropeptide FF receptor 2##AF119815|NPFFR2|10886|neuropeptide FF receptor 2##NM_004885|NPFFR2|10886|neuropeptide FF receptor 2##AK308069|NPFFR2|10886|neuropeptide FF receptor 2##AJ311393|NPFFR2|10886|neuropeptide FF receptor 2##BC101684|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC143642|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK096310|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957564|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957565|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC071812|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_173827|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17	0.247596	CTCF.p2:9:0.248
chr6	91650703	91650835	reg1018320.p2	7.619	+	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-353931	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-354086	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-644157	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	2478414	-	TSC_hg19_v1_chr6_-_96025325 BC047582	4374520	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	4374632	+	BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha	0.763337	CTCF.p2:-5:0.763
chr19	13944634	13944735	reg1014505.p2	7.618	+	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-38439	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-59400	+	TSC_hg19_v1_chr19_+_13885269 NM_014047	-59419	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	2418	-	BC101209 BC101210 NM_001098622	43378	+	AK097431 NM_024323	72224	-	AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##NM_014047|C19orf53|28974|chromosome 19 open reading frame 53##AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57	0.029508	
chr8	7281894	7282028	reg1017873.p1	7.618	+	NM_001205266	-7608	-	NM_001164457	-61472	-	TSC_hg19_v1_chr8_-_7212868 AK307331 AK302471	-69085	-	AB590071 AF217245 AF516673 AB037972 AJ237673 NM_018661 AF295370	5707	-	AF301470 NM_001081551	5908	-	NM_058206 NM_058207	27925	-	NM_001205266|DEFB4B|100289462|defensin, beta 4B##NM_001164457|ZNF705G|100131980|zinc finger protein 705G##AK302471|FAM66B|100128890|family with sequence similarity 66, member B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AF295370|DEFB103B|55894|defensin, beta 103B##AF301470|DEFB103B|55894|defensin, beta 103B##NM_001081551|DEFB103A|414325|defensin, beta 103A##NM_058206|SPAG11B|10407|sperm associated antigen 11B##NM_058207|SPAG11B|10407|sperm associated antigen 11B	1.014548	CTCF.p2:14:0.996
chr19	8751637	8751784	reg1021899.p1	7.617	+	TSC_hg19_v1_chr19_-_8675585 AB209515 NM_030957	-76118	-	TSC_hg19_v1_chr19_-_8642338 AB290178	-109312	-	TSC_hg19_v1_chr19_-_8642317 AK301166 AK310058 AB210037 AK131106 NM_012335	-109388	-	AY248901 AK292258 BC024028 TSC_hg19_v1_chr19_-_8809146 BC045752 NM_178525	57402	-	BC137046 BC151149 NM_001004699	89642	+	AK055494 NM_144693	181854	-	AB209515|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##NM_030957|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##AB290178|MYO1F|4542|myosin IF##AK301166|MYO1F|4542|myosin IF##AB210037|MYO1F|4542|myosin IF##AK131106|MYO1F|4542|myosin IF##NM_012335|MYO1F|4542|myosin IF##AY248901|ACTL9|284382|actin-like 9##AK292258|ACTL9|284382|actin-like 9##BC024028|ACTL9|284382|actin-like 9##BC045752|ACTL9|284382|actin-like 9##NM_178525|ACTL9|284382|actin-like 9##BC137046|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##BC151149|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##NM_001004699|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##AK055494|ZNF558|148156|zinc finger protein 558##NM_144693|ZNF558|148156|zinc finger protein 558	0.988506	CTCF.p2:4:0.989
chr3	124921194	124921332	reg1018417.p2	7.617	+	BC063528 TSC_hg19_v1_chr3_-_124842461	-78808	-	AB384586 NM_020733 TSC_hg19_v1_chr3_-_124774842	-146463	-	BC067235 TSC_hg19_v1_chr3_-_124732404	-188871	-	AF345197 HQ258349 BC126158 BC126160 AF390442 NM_001195483	8954	-	AK123001 TSC_hg19_v1_chr3_-_124931591 AX721165 AK131070 NM_024628	10322	-	AF039019 AL833616 AF432210 AJ236885 L04282 BC035591 BC018971 AK314203 TSC_hg19_v1_chr3_-_125094153 BC050260 NM_021964	172837	-	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)##BC067235|HEG1|57493|HEG homolog 1 (zebrafish)##AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AK123001|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_024628|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF039019|ZNF148|7707|zinc finger protein 148##AL833616|ZNF148|7707|zinc finger protein 148##AF432210|ZNF148|7707|zinc finger protein 148##AJ236885|ZNF148|7707|zinc finger protein 148##L04282|ZNF148|7707|zinc finger protein 148##BC035591|ZNF148|7707|zinc finger protein 148##BC018971|ZNF148|7707|zinc finger protein 148##AK314203|ZNF148|7707|zinc finger protein 148##BC050260|ZNF148|7707|zinc finger protein 148##NM_021964|ZNF148|7707|zinc finger protein 148	0.020928	
chr7	87987689	87987815	reg1016920.p2	7.617	+	BC020600 AF423422 AF423423 AK026806 AK307644 TSC_hg19_v1_chr7_-_87936207 NM_001205315 NM_001205316 NM_024636	-51538	-	TSC_hg19_v1_chr7_-_87856292 AK296601 NM_198901	-131458	-	TSC_hg19_v1_chr7_-_87849391 AK129770 AK310366 NM_003130	-138347	-	BC140826 BC140829 AK056672 AY295769 NM_181646	400964	+	BC028365 NM_152706	437278	-	NM_012449 TSC_hg19_v1_chr7_+_89783782 AK308452 BC011802	1795985	+	BC020600|STEAP4|79689|STEAP family member 4##AF423422|STEAP4|79689|STEAP family member 4##AF423423|STEAP4|79689|STEAP family member 4##AK026806|STEAP4|79689|STEAP family member 4##AK307644|STEAP4|79689|STEAP family member 4##NM_001205315|STEAP4|79689|STEAP family member 4##NM_001205316|STEAP4|79689|STEAP family member 4##NM_024636|STEAP4|79689|STEAP family member 4##AK296601|SRI|6717|sorcin##NM_198901|SRI|6717|sorcin##AK129770|SRI|6717|sorcin##AK310366|SRI|6717|sorcin##NM_003130|SRI|6717|sorcin##BC140826|ZNF804B|219578|zinc finger protein 804B##BC140829|ZNF804B|219578|zinc finger protein 804B##AK056672|ZNF804B|219578|zinc finger protein 804B##AY295769|ZNF804B|219578|zinc finger protein 804B##NM_181646|ZNF804B|219578|zinc finger protein 804B##BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62##NM_012449|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK308452|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC011802|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1	0.743452	CTCF.p2:-11:0.743
chr1	160520372	160520524	reg1019222.p1	7.616	+	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	-27419	-	NM_020335 TSC_hg19_v1_chr1_+_160370394	-150069	+	M96739 AK313700 NM_005598 BC013789	-183584	+	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	28799	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	28840	-	AK314244 NM_003037 BC012602	96615	-	AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1	0.408787	CTCF.p2:-10:0.409
chr1	21795234	21795361	reg1018799.p1	7.616	+	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	-28615	+	X98272 TSC_hg19_v1_chr1_-_21671998 NM_001113348	-123317	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	-178363	-	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	40562	+	TSC_hg19_v1_chr1_+_21835918 AK295608 AK312667 AK298085 BC021289 BC066116 BC090861 AB011406 AH007388 X95994 AK293184 BC110909	40635	+	AB003930 TSC_hg19_v1_chr1_-_21949064	153740	-	AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##X98272|ECE1|1889|endothelin converting enzyme 1##NM_001113348|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK295608|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK312667|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK298085|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC021289|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC066116|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC090861|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB011406|ALPL|249|alkaline phosphatase, liver/bone/kidney##X95994|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK293184|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC110909|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein	0.950219	CTCF.p2:-2:0.950
chr12	51656630	51656740	reg1015920.p1	7.616	+	TSC_hg19_v1_chr12_+_51632658 AB385271 CU677910 AK125855	-24013	+	TSC_hg19_v1_chr12_+_51632650 D31767 BC002334 BC007900 AK095963	-24050	+	TSC_hg19_v1_chr12_+_51632609 AK303828 AK290119 AK293330 AY430097 BX647278	-24086	+	BC120965 BC120966 BC008712 TSC_hg19_v1_chr12_-_51663988 NM_001033873 BC001400 AK001839 NM_001031628	7400	-	TSC_hg19_v1_chr12_-_51717901 CU690454 AF146531	61183	-	TSC_hg19_v1_chr12_-_51717911 AK093638 AB032698 AK000783 AK225911 NM_016293	61236	-	AK125855|DAZAP2|9802|DAZ associated protein 2##D31767|DAZAP2|9802|DAZ associated protein 2##BC002334|DAZAP2|9802|DAZ associated protein 2##BC007900|DAZAP2|9802|DAZ associated protein 2##AK095963|DAZAP2|9802|DAZ associated protein 2##AK303828|DAZAP2|9802|DAZ associated protein 2##AK290119|DAZAP2|9802|DAZ associated protein 2##AK293330|DAZAP2|9802|DAZ associated protein 2##AY430097|DAZAP2|9802|DAZ associated protein 2##BX647278|DAZAP2|9802|DAZ associated protein 2##BC120965|SMAGP|57228|small cell adhesion glycoprotein##BC120966|SMAGP|57228|small cell adhesion glycoprotein##BC008712|SMAGP|57228|small cell adhesion glycoprotein##NM_001033873|SMAGP|57228|small cell adhesion glycoprotein##BC001400|SMAGP|57228|small cell adhesion glycoprotein##AK001839|SMAGP|57228|small cell adhesion glycoprotein##NM_001031628|SMAGP|57228|small cell adhesion glycoprotein##AF146531|BIN2|51411|bridging integrator 2##AK093638|BIN2|51411|bridging integrator 2##AB032698|BIN2|51411|bridging integrator 2##AK000783|BIN2|51411|bridging integrator 2##AK225911|BIN2|51411|bridging integrator 2##NM_016293|BIN2|51411|bridging integrator 2	0.986904	CTCF.p2:-22:0.987
chr15	85957825	85957953	reg1014023.p1	7.616	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	-33998	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-291571	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-432563	+	AF127481 NM_144767	262378	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	380208	-	TSC_hg19_v1_chr15_-_86338178 NM_022480	380306	-	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)	0.121943	
chr5	35229506	35229616	reg1018997.p1	7.616	+	NM_001204314 NM_001204315 NM_001204316 NM_001204317 NM_001204318	-111338	-	NM_031900	-181322	-	TSC_hg19_v1_chr5_+_34929697 AY177688 AY258422 BC065745 NM_001012339 NM_194283	-299869	+	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	1016	-	NM_000949	1261	-	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	388448	+	NM_001204314|PRLR|5618|prolactin receptor##NM_001204315|PRLR|5618|prolactin receptor##NM_001204316|PRLR|5618|prolactin receptor##NM_001204317|PRLR|5618|prolactin receptor##NM_001204318|PRLR|5618|prolactin receptor##NM_031900|AGXT2|64902|alanine--glyoxylate aminotransferase 2##AY177688|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##AY258422|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##BC065745|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_001012339|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_194283|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##NM_000949|PRLR|5618|prolactin receptor##BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2	0.0	
chr8	11267040	11267165	reg1018931.p1	7.616	+	BC038546 TSC_hg19_v1_chr8_-_11205010	-62098	-	AJ291677 NM_054028 BC131696	-78592	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	-124747	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	57127	-	S76617 NM_001715 BC018703 BC004473 BC038555	84491	+	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	294618	+	BC038546|LOC100129129|100129129|uncharacterized LOC100129129##AJ291677|SLC35G5|83650|solute carrier family 35, member G5##NM_054028|SLC35G5|83650|solute carrier family 35, member G5##BC131696|SLC35G5|83650|solute carrier family 35, member G5##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4	0.923126	CTCF.p2:-6:0.923
chr3	26159838	26159974	reg1015875.p2	7.615	+	TSC_hg19_v1_chr3_+_25831590 NM_001145391 NM_017897 AK000611 AK304821 AK225260 BC008202	-328326	+	AK296047 NM_001145294	-328394	-	TSC_hg19_v1_chr3_-_25824955 NM_001145293 NM_001145295 NM_018297	-334936	-	BC067784 TSC_hg19_v1_chr3_+_26664296 AF396933 NM_052953	504394	+	TSC_hg19_v1_chr3_-_27410884 AK123061 NM_199347	1251007	-	AF047033 AF089726 NM_003615	1338338	-	NM_001145391|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##NM_017897|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK000611|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK304821|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK225260|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##BC008202|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK296047|NGLY1|55768|N-glycanase 1##NM_001145294|NGLY1|55768|N-glycanase 1##NM_001145293|NGLY1|55768|N-glycanase 1##NM_001145295|NGLY1|55768|N-glycanase 1##NM_018297|NGLY1|55768|N-glycanase 1##BC067784|LRRC3B|116135|leucine rich repeat containing 3B##AF396933|LRRC3B|116135|leucine rich repeat containing 3B##NM_052953|LRRC3B|116135|leucine rich repeat containing 3B##AK123061|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##NM_199347|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7	0.209173	CTCF.p2:1:0.209
chr6	71722647	71722788	reg1020646.p1	7.615	+	AB075843 NM_080742	-55954	-	TSC_hg19_v1_chr6_+_71377620 AK315579 BC028074 BC008672 AK303387 BC036123 AK023221 AY055003 AY055004 AK222711 AK290448 CU688386	-345062	+	TSC_hg19_v1_chr6_+_71377511 NM_001044305 NM_021940 AF442495	-345194	+	NM_024576 TSC_hg19_v1_chr6_+_71998479	275769	+	TSC_hg19_v1_chr6_+_71998513 BC018688	275793	+	TSC_hg19_v1_chr6_+_71998514 BC110999	275807	+	AB075843|B3GAT2|135152|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)##NM_080742|B3GAT2|135152|beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)##AK315579|SMAP1|60682|small ArfGAP 1##BC028074|SMAP1|60682|small ArfGAP 1##BC008672|SMAP1|60682|small ArfGAP 1##AK303387|SMAP1|60682|small ArfGAP 1##BC036123|SMAP1|60682|small ArfGAP 1##AK023221|SMAP1|60682|small ArfGAP 1##AY055003|SMAP1|60682|small ArfGAP 1##AY055004|SMAP1|60682|small ArfGAP 1##AK222711|SMAP1|60682|small ArfGAP 1##AK290448|SMAP1|60682|small ArfGAP 1##NM_001044305|SMAP1|60682|small ArfGAP 1##NM_021940|SMAP1|60682|small ArfGAP 1##AF442495|SMAP1|60682|small ArfGAP 1##NM_024576|OGFRL1|79627|opioid growth factor receptor-like 1##BC018688|OGFRL1|79627|opioid growth factor receptor-like 1##BC110999|OGFRL1|79627|opioid growth factor receptor-like 1	0.994585	CTCF.p2:19:0.995
chr8	56433564	56433684	reg1020052.p1	7.615	+	BC106028 AY534241 NM_052898	-418610	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	-904972	+	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	-1063108	+	AF286340 NM_024831	252121	+	AK308247 AK056932 NM_152417 BC020835 BC071636	252273	-	TSC_hg19_v1_chr8_+_56686028 AY028423 AK314693 BX648548 AF432215	252396	+	AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##AF286340|TGS1|96764|trimethylguanosine synthase 1##NM_024831|TGS1|96764|trimethylguanosine synthase 1##AK308247|TMEM68|137695|transmembrane protein 68##AK056932|TMEM68|137695|transmembrane protein 68##NM_152417|TMEM68|137695|transmembrane protein 68##BC020835|TMEM68|137695|transmembrane protein 68##BC071636|TMEM68|137695|transmembrane protein 68##AY028423|TGS1|96764|trimethylguanosine synthase 1##AK314693|TGS1|96764|trimethylguanosine synthase 1##BX648548|TGS1|96764|trimethylguanosine synthase 1##AF432215|TGS1|96764|trimethylguanosine synthase 1	0.084693	
chr1	16951544	16951638	reg1015490.p1	7.614	+	TSC_hg19_v1_chr1_-_16940046 AK123260 AY894575 NM_017940 BC066930 BC010124 BC082236 BC110431 AK055895 BC093404	-11695	-	BC028053 TSC_hg19_v1_chr1_-_16825680	-125940	-	TSC_hg19_v1_chr1_+_16767236 BC017014 AK001282 AB463921 AK024468 AM393342	-184346	+	TSC_hg19_v1_chr1_-_16971175 AK090414	19575	-	AK123337 TSC_hg19_v1_chr1_-_16971178	19586	-	TSC_hg19_v1_chr1_+_17248425 NM_014675	296843	+	AK123260|NBPF1|55672|neuroblastoma breakpoint family, member 1##AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_017940|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC066930|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC010124|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC110431|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK055895|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC093404|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC017014|NECAP2|55707|NECAP endocytosis associated 2##AK001282|NECAP2|55707|NECAP endocytosis associated 2##AK024468|NECAP2|55707|NECAP endocytosis associated 2##AM393342|NECAP2|55707|NECAP endocytosis associated 2##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK123337|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##NM_014675|CROCC|9696|ciliary rootlet coiled-coil, rootletin	0.021505	
chr20	48125220	48125361	reg1019344.p1	7.614	+	BC110572 BC110573 NM_004975	-26111	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-230095	+	TSC_hg19_v1_chr20_+_47895176 BC042807 CR936805	-230118	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	59399	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	204940	-	AB004550 TSC_hg19_v1_chr20_-_48330359	205066	-	BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC042807|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##CR936805|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.996958	CTCF.p2:16:0.997
chr4	175041760	175041895	reg1021497.p1	7.614	+	EF529495 EF529496 EF529497 EF529498 EF529499 EF529500 EF529501 EF529502 EF529503 EF529504 EF529505 EF529506 EF529507 EF529508 EF529509 EU000853 EU000854 EU000855 EU000856 TSC_hg19_v1_chr4_+_174451609 AB075501 AK300846 AK054605	-590217	+	TSC_hg19_v1_chr4_-_174451381 NM_021973 AK122739 FJ226608	-590458	-	BC101406 BC101974 BC109383 TSC_hg19_v1_chr4_-_174450570	-591277	-	AF174596 AF233224 TSC_hg19_v1_chr4_-_175204794 AF115514 AY358721 BC014679 AF201932 AK026319 BC040456 AK314483	162907	-	NM_001040157 TSC_hg19_v1_chr4_+_175204877	163033	+	TSC_hg19_v1_chr4_+_175205073 NM_001145314 BC038667 AB051499 AK094961 AK292484	163286	+	EF529495|NBLA00301|79804|Nbla00301##EF529496|NBLA00301|79804|Nbla00301##EF529497|NBLA00301|79804|Nbla00301##EF529498|NBLA00301|79804|Nbla00301##EF529499|NBLA00301|79804|Nbla00301##EF529500|NBLA00301|79804|Nbla00301##EF529501|NBLA00301|79804|Nbla00301##EF529502|NBLA00301|79804|Nbla00301##EF529503|NBLA00301|79804|Nbla00301##EF529504|NBLA00301|79804|Nbla00301##EF529505|NBLA00301|79804|Nbla00301##EF529506|NBLA00301|79804|Nbla00301##EF529507|NBLA00301|79804|Nbla00301##EF529508|NBLA00301|79804|Nbla00301##EF529509|NBLA00301|79804|Nbla00301##EU000853|NBLA00301|79804|Nbla00301##EU000854|NBLA00301|79804|Nbla00301##EU000855|NBLA00301|79804|Nbla00301##EU000856|NBLA00301|79804|Nbla00301##AB075501|NBLA00301|79804|Nbla00301##AK054605|NBLA00301|79804|Nbla00301##NM_021973|HAND2|9464|heart and neural crest derivatives expressed 2##AK122739|HAND2|9464|heart and neural crest derivatives expressed 2##FJ226608|HAND2|9464|heart and neural crest derivatives expressed 2##BC101406|HAND2|9464|heart and neural crest derivatives expressed 2##BC101974|HAND2|9464|heart and neural crest derivatives expressed 2##BC109383|HAND2|9464|heart and neural crest derivatives expressed 2##AF174596|FBXO8|26269|F-box protein 8##AF233224|FBXO8|26269|F-box protein 8##AF115514|FBXO8|26269|F-box protein 8##AY358721|FBXO8|26269|F-box protein 8##BC014679|FBXO8|26269|F-box protein 8##AF201932|FBXO8|26269|F-box protein 8##AK026319|FBXO8|26269|F-box protein 8##BC040456|FBXO8|26269|F-box protein 8##AK314483|FBXO8|26269|F-box protein 8##NM_001040157|CEP44|80817|centrosomal protein 44kDa##NM_001145314|CEP44|80817|centrosomal protein 44kDa##BC038667|CEP44|80817|centrosomal protein 44kDa##AB051499|CEP44|80817|centrosomal protein 44kDa##AK094961|CEP44|80817|centrosomal protein 44kDa##AK292484|CEP44|80817|centrosomal protein 44kDa	0.966436	CTCF.p2:11:0.966
chr9	27247807	27247913	reg1018198.p1	7.614	+	AK294887 NM_000459	-138718	+	BC126156 BC136298 AK222987 AK024955 BC056252 NM_022901	-242191	-	TSC_hg19_v1_chr9_+_26956416 NM_001099224 NM_025103 AK023707 AK225570 BC023634 AY040325 BC107742	-291449	+	BC137351 BC137352 BC144602 BC014307 AJ278482 NM_001161585 NM_020641	49261	-	AF146759 AF315688 NM_020124 AY358855 AB463795	276462	+	TSC_hg19_v1_chr9_-_27529809 AL832572 BC033027 AK023266 NM_024761	281790	-	AK294887|TEK|7010|TEK tyrosine kinase, endothelial##NM_000459|TEK|7010|TEK tyrosine kinase, endothelial##BC126156|LRRC19|64922|leucine rich repeat containing 19##BC136298|LRRC19|64922|leucine rich repeat containing 19##AK222987|LRRC19|64922|leucine rich repeat containing 19##AK024955|LRRC19|64922|leucine rich repeat containing 19##BC056252|LRRC19|64922|leucine rich repeat containing 19##NM_022901|LRRC19|64922|leucine rich repeat containing 19##NM_001099224|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##NM_025103|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AK023707|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AK225570|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##BC023634|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AY040325|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##BC107742|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##BC137351|C9orf11|54586|chromosome 9 open reading frame 11##BC137352|C9orf11|54586|chromosome 9 open reading frame 11##BC144602|C9orf11|54586|chromosome 9 open reading frame 11##BC014307|C9orf11|54586|chromosome 9 open reading frame 11##AJ278482|C9orf11|54586|chromosome 9 open reading frame 11##NM_001161585|C9orf11|54586|chromosome 9 open reading frame 11##NM_020641|C9orf11|54586|chromosome 9 open reading frame 11##AF146759|IFNK|56832|interferon, kappa##AF315688|IFNK|56832|interferon, kappa##NM_020124|IFNK|56832|interferon, kappa##AY358855|IFNK|56832|interferon, kappa##AL832572|MOB3B|79817|MOB kinase activator 3B##BC033027|MOB3B|79817|MOB kinase activator 3B##AK023266|MOB3B|79817|MOB kinase activator 3B##NM_024761|MOB3B|79817|MOB kinase activator 3B	0.995183	CTCF.p2:6:0.995
chr10	1797877	1797997	reg1016671.p1	7.613	+	AF034837 NM_018702	-18268	-	TSC_hg19_v1_chr10_+_1102822 AK292591	-695111	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-695168	+	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	1311810	+	AK092597 AX747622 NM_001242339	1312881	+	BC021698 TSC_hg19_v1_chr10_+_3151628	1353675	+	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet##BC021698|PFKP|5214|phosphofructokinase, platelet	0.576265	CTCF.p2:-4:0.576
chr11	76445099	76445201	reg1014460.p1	7.613	+	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	-63341	-	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	-64182	-	TSC_hg19_v1_chr11_+_76156061 AK304043 BC033404 NM_020193 AK309621 BC021688 AK125114	-289047	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	49127	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	126782	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	126843	+	BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##AK304043|C11orf30|56946|chromosome 11 open reading frame 30##BC033404|C11orf30|56946|chromosome 11 open reading frame 30##NM_020193|C11orf30|56946|chromosome 11 open reading frame 30##AK309621|C11orf30|56946|chromosome 11 open reading frame 30##BC021688|C11orf30|56946|chromosome 11 open reading frame 30##AK125114|C11orf30|56946|chromosome 11 open reading frame 30##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3	0.999638	CTCF.p2:-42:1.000
chr1	24742035	24742144	reg1018534.p1	7.613	+	BC040212 NM_001199012	-503	-	TSC_hg19_v1_chr1_-_24740273 AK090659 AK299401 AX746563 BC035061 NM_001199013 NM_001199014 NM_178122	-1867	-	AY231160 AY231161 NM_021180	-92560	+	NM_020448 TSC_hg19_v1_chr1_+_24742291 AK312433 BX640883 BC012492 BC001265 BC063583 U90918	214	+	TSC_hg19_v1_chr1_+_24828833 NM_001251979 NM_001251984 JN228252 GQ411200 HQ317421 HQ317422	86731	+	TSC_hg19_v1_chr1_+_24829420 BC035854 NM_001251977 NM_001251981 NM_001251983 NM_013441 HQ287726	87362	+	BC040212|C1orf201|90529|chromosome 1 open reading frame 201##NM_001199012|C1orf201|90529|chromosome 1 open reading frame 201##AK299401|C1orf201|90529|chromosome 1 open reading frame 201##BC035061|C1orf201|90529|chromosome 1 open reading frame 201##NM_001199013|C1orf201|90529|chromosome 1 open reading frame 201##NM_001199014|C1orf201|90529|chromosome 1 open reading frame 201##NM_178122|C1orf201|90529|chromosome 1 open reading frame 201##AY231160|GRHL3|57822|grainyhead-like 3 (Drosophila)##AY231161|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_021180|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_020448|NIPAL3|57185|NIPA-like domain containing 3##AK312433|NIPAL3|57185|NIPA-like domain containing 3##BX640883|NIPAL3|57185|NIPA-like domain containing 3##BC012492|NIPAL3|57185|NIPA-like domain containing 3##BC001265|NIPAL3|57185|NIPA-like domain containing 3##BC063583|NIPAL3|57185|NIPA-like domain containing 3##U90918|NIPAL3|57185|NIPA-like domain containing 3##NM_001251979|RCAN3|11123|RCAN family member 3##NM_001251984|RCAN3|11123|RCAN family member 3##JN228252|RCAN3|11123|RCAN family member 3##GQ411200|RCAN3|11123|RCAN family member 3##HQ317421|RCAN3|11123|RCAN family member 3##HQ317422|RCAN3|11123|RCAN family member 3##BC035854|RCAN3|11123|RCAN family member 3##NM_001251977|RCAN3|11123|RCAN family member 3##NM_001251981|RCAN3|11123|RCAN family member 3##NM_001251983|RCAN3|11123|RCAN family member 3##NM_013441|RCAN3|11123|RCAN family member 3##HQ287726|RCAN3|11123|RCAN family member 3	0.176372	
chr22	25843884	25844022	reg1019990.p1	7.613	+	BC139736 NM_001135772	-66410	-	AL137651 NM_182492	-85430	-	NM_000496	-228342	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	123	+	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	116846	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	116993	+	BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_000496|CRYBB2|1415|crystallin, beta B2##BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2	0.611326	CTCF.p2:11:0.523
chr11	65017923	65018045	reg1018283.p2	7.612	+	AK131327 NM_001004326 BC146850	-36670	+	TSC_hg19_v1_chr11_+_64949413 BC017200	-68545	+	TSC_hg19_v1_chr11_+_64949398 AK301538	-68583	+	TSC_hg19_v1_chr11_+_65029432 AK309284 BC001347 BC002990 BC018813 BC018814 NM_002689 AK297842 AK307831 AK025315	11422	+	NM_006779 TSC_hg19_v1_chr11_+_65082336 AF001436 AF163840 AK315444 BC075834	64353	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	83300	+	AK131327|SLC22A20|440044|solute carrier family 22, member 20##NM_001004326|SLC22A20|440044|solute carrier family 22, member 20##BC146850|SLC22A20|440044|solute carrier family 22, member 20##BC017200|CAPN1|823|calpain 1, (mu/I) large subunit##AK301538|CAPN1|823|calpain 1, (mu/I) large subunit##AK309284|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC001347|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC002990|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018813|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018814|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_002689|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK297842|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK307831|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK025315|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_006779|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF001436|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF163840|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AK315444|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##BC075834|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2	0.74683	CTCF.p2:9:0.719
chr12	19441692	19441816	reg1018499.p1	7.612	+	TSC_hg19_v1_chr12_+_19282701 NM_001143821 NM_001190860 NM_019012 BC070174 BC044245 AK297391 AK295151 AK026344 AF302150 BC127091 BC127092 AB051473	-159189	+	BC016745 NM_033328 AB053259 AK058174 CU677705	-550634	+	AF532185 NM_033123 AK314516 AY035866 AK292279	-550801	-	TSC_hg19_v1_chr12_+_19592425 AK131361 NM_001114176 NM_153207 AK126973 BC022220	150765	+	TSC_hg19_v1_chr12_+_19592783 AB209384	151041	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	151434	+	NM_001143821|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##NM_001190860|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##NM_019012|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC070174|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC044245|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AK297391|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AK295151|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AK026344|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AF302150|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC127091|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC127092|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AB051473|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC016745|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##NM_033328|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AB053259|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AK058174|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1##AK131361|AEBP2|121536|AE binding protein 2##NM_001114176|AEBP2|121536|AE binding protein 2##NM_153207|AEBP2|121536|AE binding protein 2##AK126973|AEBP2|121536|AE binding protein 2##BC022220|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2	0.956685	CTCF.p2:4:0.957
chr12	55153659	55153775	reg1017752.p1	7.612	+	AY590150 AF144011 BC062682 BC069108 NM_053283 EF503687 EF503688 EF503689	-111512	-	CU686745 CU687522 AF238867 BC069317 NM_033277 BC062217	-125066	-	CR457003 AY063766 U48707 TSC_hg19_v1_chr12_-_54982398 BC022470 NM_006741 AK123969	-171353	-	NM_058173 AF414087 AY359062 BC111421 AY651259	94615	+	BC132732 BC132734 NM_001098815	221904	-	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	224785	-	AY590150|DCD|117159|dermcidin##AF144011|DCD|117159|dermcidin##BC062682|DCD|117159|dermcidin##BC069108|DCD|117159|dermcidin##NM_053283|DCD|117159|dermcidin##EF503687|DCD|117159|dermcidin##EF503688|DCD|117159|dermcidin##EF503689|DCD|117159|dermcidin##AF238867|LACRT|90070|lacritin##BC069317|LACRT|90070|lacritin##NM_033277|LACRT|90070|lacritin##BC062217|LACRT|90070|lacritin##CR457003|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AY063766|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##U48707|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##BC022470|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_006741|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AK123969|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748	0.278527	CTCF.p2:-11:0.279
chr2	74494287	74494422	reg1020799.p1	7.612	+	NM_006636 TSC_hg19_v1_chr2_+_74425741 AK300035 AK130664 AK222826 AK223041 AK302245 AK313138 BC015062 BC001548 BC017054 AB529041 X16396 DQ894679	-68617	+	AK057260 TSC_hg19_v1_chr2_-_74425749	-68639	-	AJ577474 CU678456 TSC_hg19_v1_chr2_-_74406014 AB016839 AK023321 AK001650 BC003398 NM_018221 AK021657	-88447	-	AF243499 AF293338 NM_021196	47796	-	NM_133478	76179	-	AK315014 BC071583 TSC_hg19_v1_chr2_-_74601817 NM_001135041 NM_023019	107403	-	NM_006636|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK300035|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK130664|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK222826|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK223041|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK302245|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK313138|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC015062|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC001548|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC017054|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##X16396|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##DQ894679|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AJ577474|MOB1A|55233|MOB kinase activator 1A##AB016839|MOB1A|55233|MOB kinase activator 1A##AK023321|MOB1A|55233|MOB kinase activator 1A##AK001650|MOB1A|55233|MOB kinase activator 1A##BC003398|MOB1A|55233|MOB kinase activator 1A##NM_018221|MOB1A|55233|MOB kinase activator 1A##AK021657|MOB1A|55233|MOB kinase activator 1A##AF243499|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##AF293338|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##NM_021196|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##NM_133478|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##AK315014|DCTN1|1639|dynactin 1##BC071583|DCTN1|1639|dynactin 1##NM_001135041|DCTN1|1639|dynactin 1##NM_023019|DCTN1|1639|dynactin 1	0.0	
chr6	86901953	86902088	reg1019989.p1	7.612	+	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	-513583	-	TSC_hg19_v1_chr6_-_86353055 AF037448 NM_001159677 NM_006372	-548995	-	TSC_hg19_v1_chr6_-_86352716 AF155568	-549305	-	NM_000865	745003	+	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	902798	-	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	963269	+	BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##AF037448|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159677|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_006372|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AF155568|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292	0.935224	CTCF.p2:8:0.935
chr7	23502569	23502697	reg1021143.p1	7.612	+	TSC_hg19_v1_chr7_+_23338957 BC012331 NM_138446 AK127742 AK316559	-163668	+	AF322909 TSC_hg19_v1_chr7_+_23286426 BC025297 BC011595 CU679974 CU689536 AB528457 DQ892084 DQ895277 BT007074	-216185	+	TSC_hg19_v1_chr7_+_23286407 AJ505015	-216228	+	TSC_hg19_v1_chr7_-_23509637 AB529064 CU688032	7046	-	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	7365	-	TSC_hg19_v1_chr7_+_23530136 BC026177	27534	+	BC012331|C7orf30|115416|chromosome 7 open reading frame 30##NM_138446|C7orf30|115416|chromosome 7 open reading frame 30##AK127742|C7orf30|115416|chromosome 7 open reading frame 30##AK316559|C7orf30|115416|chromosome 7 open reading frame 30##AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb##BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb##BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb##BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb##AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32	0.572228	CTCF.p2:18:0.572
chr8	6116125	6116248	reg1018174.p2	7.612	+	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	-1263892	-	AY017307 TSC_hg19_v1_chr8_-_4852228	-1263961	-	AK128880 TSC_hg19_v1_chr8_-_2585966	-3530204	-	TSC_hg19_v1_chr8_-_6264053 BC036625	147871	-	TSC_hg19_v1_chr8_-_6264070 AK025595 BC024246	147888	-	NM_001172574 NM_001172575 NM_024596 BC056195 BC030702 AK308387 TSC_hg19_v1_chr8_+_6264158	147949	+	AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AK025595|LOC100287015|100287015|uncharacterized LOC100287015##NM_001172574|MCPH1|79648|microcephalin 1##NM_001172575|MCPH1|79648|microcephalin 1##NM_024596|MCPH1|79648|microcephalin 1##BC056195|MCPH1|79648|microcephalin 1##BC030702|MCPH1|79648|microcephalin 1##AK308387|MCPH1|79648|microcephalin 1	0.223481	CTCF.p2:-8:0.223
chr9	139793659	139793839	reg1018626.p1	7.612	+	U12597 BC033810 AK054686 BC032410 TSC_hg19_v1_chr9_+_139780991	-12762	+	TSC_hg19_v1_chr9_+_139780967 BX538160 BC043492 NM_021138 AK222961 AK294607 AK298370	-12796	+	BT009863 CR541914 DQ891577 DQ894770 AB590058 TSC_hg19_v1_chr9_-_139760757 AJ005259 AB002282 AB002283 BC015500 NM_003792 NM_153200	-33011	-	TSC_hg19_v1_chr9_-_139839068 AK026081	45319	-	BC014297 TSC_hg19_v1_chr9_-_139839082 AK315738	45335	-	BC014130 TSC_hg19_v1_chr9_-_139839140 BC035355 BC031100 NM_018998	45387	-	BC033810|TRAF2|7186|TNF receptor-associated factor 2##AK054686|TRAF2|7186|TNF receptor-associated factor 2##BC032410|TRAF2|7186|TNF receptor-associated factor 2##BX538160|TRAF2|7186|TNF receptor-associated factor 2##BC043492|TRAF2|7186|TNF receptor-associated factor 2##NM_021138|TRAF2|7186|TNF receptor-associated factor 2##AK222961|TRAF2|7186|TNF receptor-associated factor 2##AK294607|TRAF2|7186|TNF receptor-associated factor 2##AK298370|TRAF2|7186|TNF receptor-associated factor 2##BT009863|EDF1|8721|endothelial differentiation-related factor 1##CR541914|EDF1|8721|endothelial differentiation-related factor 1##DQ891577|EDF1|8721|endothelial differentiation-related factor 1##DQ894770|EDF1|8721|endothelial differentiation-related factor 1##AB002282|EDF1|8721|endothelial differentiation-related factor 1##AB002283|EDF1|8721|endothelial differentiation-related factor 1##BC015500|EDF1|8721|endothelial differentiation-related factor 1##NM_003792|EDF1|8721|endothelial differentiation-related factor 1##NM_153200|EDF1|8721|endothelial differentiation-related factor 1##AK026081|FBXW5|54461|F-box and WD repeat domain containing 5##BC014297|FBXW5|54461|F-box and WD repeat domain containing 5##AK315738|FBXW5|54461|F-box and WD repeat domain containing 5##BC014130|FBXW5|54461|F-box and WD repeat domain containing 5##BC035355|FBXW5|54461|F-box and WD repeat domain containing 5##BC031100|FBXW5|54461|F-box and WD repeat domain containing 5##NM_018998|FBXW5|54461|F-box and WD repeat domain containing 5	0.470729	CTCF.p2:-75:0.471
chr10	103362503	103362610	reg1002455.p1	7.611	+	TSC_hg19_v1_chr10_+_103348081 BC031695 BC001082 NM_015448 AK290154 AB527777 EU832466 EU832547 AY532267	-14486	+	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	-14547	-	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	-14627	-	AK314735 TSC_hg19_v1_chr10_-_103454693 NM_022039	92158	-	TSC_hg19_v1_chr10_-_103454921 AF281859	92406	-	AB014615 U36223 U46211 U46212 U46213 U56978 BC069106 BC128235 BC128236 NM_006119 NM_033163 NM_033164 NM_033165	173151	-	BC031695|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##BC001082|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##NM_015448|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AK290154|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832466|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832547|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AY532267|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK314735|FBXW4|6468|F-box and WD repeat domain containing 4##NM_022039|FBXW4|6468|F-box and WD repeat domain containing 4##AF281859|FBXW4|6468|F-box and WD repeat domain containing 4##AB014615|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U36223|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46211|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46212|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46213|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U56978|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC069106|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC128235|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC128236|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_006119|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033163|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033164|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033165|FGF8|2253|fibroblast growth factor 8 (androgen-induced)	0.324576	CTCF.p2:29:0.325
chr9	37364889	37365014	reg1016753.p1	7.611	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-244368	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-244443	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-244465	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	57755	+	BC010007 TSC_hg19_v1_chr9_-_37465267	100309	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	100444	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.12834	
chr14	94373210	94373320	reg1016396.p2	7.610	+	AY225516 AY225517 NM_178013	-118500	-	AY161004 NM_182971 BC101125 BC101126	-559717	+	AK125327 NM_020818	-573701	+	NM_001207071 NM_138344 AK093387 AX748092	11983	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	20443	+	AB056723 NM_016150	50501	-	AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##AY161004|COX8C|341947|cytochrome c oxidase subunit VIIIC##NM_182971|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101125|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101126|COX8C|341947|cytochrome c oxidase subunit VIIIC##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A##AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2	0.96443	CTCF.p2:2:0.964
chr17	76741555	76741677	reg1017666.p2	7.610	+	TSC_hg19_v1_chr17_-_76732958 AK311535	-8618	-	TSC_hg19_v1_chr17_-_76719676 AK293894	-21865	-	AK316277 TSC_hg19_v1_chr17_-_76719649	-21969	-	AB590939 EU832306 EU832390 BC050452 BC038385 TSC_hg19_v1_chr17_-_76778380 AK296914 AK307917 M85169 NM_004762 NM_017456	36737	-	BC071582 TSC_hg19_v1_chr17_-_76836610	95034	-	TSC_hg19_v1_chr17_-_76836843 AK225426	95167	-	AK293894|CYTH1|9267|cytohesin 1##AK316277|CYTH1|9267|cytohesin 1##EU832306|CYTH1|9267|cytohesin 1##EU832390|CYTH1|9267|cytohesin 1##BC050452|CYTH1|9267|cytohesin 1##BC038385|CYTH1|9267|cytohesin 1##AK296914|CYTH1|9267|cytohesin 1##AK307917|CYTH1|9267|cytohesin 1##M85169|CYTH1|9267|cytohesin 1##NM_004762|CYTH1|9267|cytohesin 1##NM_017456|CYTH1|9267|cytohesin 1##BC071582|USP36|57602|ubiquitin specific peptidase 36##AK225426|USP36|57602|ubiquitin specific peptidase 36	0.999864	CTCF.p2:11:1.000
chrX	137210328	137210439	reg1015797.p1	7.610	+	EU532020 TSC_hg19_v1_chrX_+_136648691 BC113393 BC113395 AB464363 HQ258447	-561616	+	TSC_hg19_v1_chrX_+_136648313 AF028706 NM_003413	-562054	+	BC069439 NM_054021 CU686814	-1096548	-	AF100143 TSC_hg19_v1_chrX_-_137793504 AK289960 BC034340	583071	-	BC012347 NM_004114 TSC_hg19_v1_chrX_-_137793839	583454	-	AF100144 NM_033642	611131	-	EU532020|ZIC3|7547|Zic family member 3##BC113393|ZIC3|7547|Zic family member 3##BC113395|ZIC3|7547|Zic family member 3##HQ258447|ZIC3|7547|Zic family member 3##AF028706|ZIC3|7547|Zic family member 3##NM_003413|ZIC3|7547|Zic family member 3##BC069439|GPR101|83550|G protein-coupled receptor 101##NM_054021|GPR101|83550|G protein-coupled receptor 101##AF100143|FGF13|2258|fibroblast growth factor 13##AK289960|FGF13|2258|fibroblast growth factor 13##BC034340|FGF13|2258|fibroblast growth factor 13##BC012347|FGF13|2258|fibroblast growth factor 13##NM_004114|FGF13|2258|fibroblast growth factor 13##AF100144|FGF13|2258|fibroblast growth factor 13##NM_033642|FGF13|2258|fibroblast growth factor 13	0.880067	CTCF.p2:0:0.880
chr20	34542479	34542597	reg1016412.p2	7.609	+	TSC_hg19_v1_chr20_-_34542404 AF204271 BC000785 AF207829 NM_033630	-72	-	AB464702 AM392883 AM393129 CR457188 EU446495 TSC_hg19_v1_chr20_-_34542233	-303	-	TSC_hg19_v1_chr20_+_34359958 BC093405 NM_016436 BC062681 AF258787 AY134747 AK054597 BC150178 AF220416 AK314503 BC080598 BC015538 BC016948 BC048210 BC006415	-182593	+	NM_016558	742	-	AK057454 NM_001207076 NM_080834 BC030782 BC057288 BC114634 BC114945	13998	+	TSC_hg19_v1_chr20_-_34638883 BC011592 AK090641 AX746554 BC031254	96366	-	AF204271|SCAND1|51282|SCAN domain containing 1##BC000785|SCAND1|51282|SCAN domain containing 1##AF207829|SCAND1|51282|SCAN domain containing 1##NM_033630|SCAND1|51282|SCAN domain containing 1##AM392883|SCAND1|51282|SCAN domain containing 1##AM393129|SCAND1|51282|SCAN domain containing 1##CR457188|SCAND1|51282|SCAN domain containing 1##EU446495|SCAND1|51282|SCAN domain containing 1##BC093405|PHF20|51230|PHD finger protein 20##NM_016436|PHF20|51230|PHD finger protein 20##BC062681|PHF20|51230|PHD finger protein 20##AF258787|PHF20|51230|PHD finger protein 20##AY134747|PHF20|51230|PHD finger protein 20##AK054597|PHF20|51230|PHD finger protein 20##BC150178|PHF20|51230|PHD finger protein 20##AF220416|PHF20|51230|PHD finger protein 20##AK314503|PHF20|51230|PHD finger protein 20##BC080598|PHF20|51230|PHD finger protein 20##BC016948|PHF20|51230|PHD finger protein 20##BC048210|PHF20|51230|PHD finger protein 20##BC006415|PHF20|51230|PHD finger protein 20##NM_016558|SCAND1|51282|SCAN domain containing 1##AK057454|C20orf152|140894|chromosome 20 open reading frame 152##NM_001207076|C20orf152|140894|chromosome 20 open reading frame 152##NM_080834|C20orf152|140894|chromosome 20 open reading frame 152##BC030782|C20orf152|140894|chromosome 20 open reading frame 152##BC057288|C20orf152|140894|chromosome 20 open reading frame 152##BC114634|C20orf152|140894|chromosome 20 open reading frame 152##BC114945|C20orf152|140894|chromosome 20 open reading frame 152##BC011592|LOC647979|647979|uncharacterized LOC647979##AK090641|LOC647979|647979|uncharacterized LOC647979	0.691583	CTCF.p2:-53:0.692
chr2	208491980	208492116	reg1017281.p1	7.609	+	TSC_hg19_v1_chr2_-_208490039 BC009462 AF455817	-1965	-	NM_001127395 TSC_hg19_v1_chr2_-_208489987	-2059	-	AK093812 AX748320 BC033720 NM_145280	-2353	-	TSC_hg19_v1_chr2_+_208576363 AK097751 NM_001142300 NM_152523	84253	+	TSC_hg19_v1_chr2_+_208576365 BC047293	84347	+	TSC_hg19_v1_chr2_+_208576466 BC067253	84452	+	BC009462|METTL21A|151194|methyltransferase like 21A##AF455817|METTL21A|151194|methyltransferase like 21A##NM_001127395|METTL21A|151194|methyltransferase like 21A##AK093812|METTL21A|151194|methyltransferase like 21A##BC033720|METTL21A|151194|methyltransferase like 21A##NM_145280|METTL21A|151194|methyltransferase like 21A##AK097751|CCNYL1|151195|cyclin Y-like 1##NM_001142300|CCNYL1|151195|cyclin Y-like 1##NM_152523|CCNYL1|151195|cyclin Y-like 1##BC047293|CCNYL1|151195|cyclin Y-like 1##BC067253|CCNYL1|151195|cyclin Y-like 1	0.0	
chr2	74619180	74619354	reg1016854.p2	7.609	+	TSC_hg19_v1_chr2_-_74619172 NM_001190836	-95	-	TSC_hg19_v1_chr2_-_74618983 BX647972	-282	-	TSC_hg19_v1_chr2_-_74618975 BX647925	-293	-	NM_001145054	25576	-	AK023015 AK222696 TSC_hg19_v1_chr2_+_74648856 BC032428 AK311621 BC051848 NM_032118 BC051753	29607	+	TSC_hg19_v1_chr2_-_74667581 AK307302 AF290512 NM_001015056 NM_033046	48364	-	NM_001190836|DCTN1|1639|dynactin 1##BX647972|DCTN1|1639|dynactin 1##BX647925|DCTN1|1639|dynactin 1##NM_001145054|C2orf81|388963|chromosome 2 open reading frame 81##AK023015|WDR54|84058|WD repeat domain 54##AK222696|WDR54|84058|WD repeat domain 54##BC032428|WDR54|84058|WD repeat domain 54##AK311621|WDR54|84058|WD repeat domain 54##BC051848|WDR54|84058|WD repeat domain 54##NM_032118|WDR54|84058|WD repeat domain 54##BC051753|WDR54|84058|WD repeat domain 54##AK307302|RTKN|6242|rhotekin##AF290512|RTKN|6242|rhotekin##NM_001015056|RTKN|6242|rhotekin##NM_033046|RTKN|6242|rhotekin	0.385053	CTCF.p2:2:0.385
chr3	159928875	159929005	reg1020153.p1	7.609	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	-222208	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	-371081	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	-371247	+	TSC_hg19_v1_chr3_+_159943306 NM_001168214	14397	+	BC031660 TSC_hg19_v1_chr3_+_159943777	14763	+	AB037795 NM_001190242	172558	-	NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80##BC031660|C3orf80|401097|chromosome 3 open reading frame 80##AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	0.054895	
chr4	72598575	72598694	reg1020489.p1	7.609	+	BC030977 NM_003759 AF007216 AK308038 CU689062	-393767	+	AF069510 AB470072 AF053753 AF053754 AF310248 EF531618 TSC_hg19_v1_chr4_+_72102322	-496348	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	-545911	+	AB591002 CU691194 M12654 TSC_hg19_v1_chr4_-_72649797 AK290827 AK298433 AK312971 BC057228 BC022310 X03178 AK315853 NM_000583	51272	-	AK309595 NM_001204307	71123	-	AK223458 NM_001204306	72602	-	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK290827|GC|2638|group-specific component (vitamin D binding protein)##AK298433|GC|2638|group-specific component (vitamin D binding protein)##AK312971|GC|2638|group-specific component (vitamin D binding protein)##BC057228|GC|2638|group-specific component (vitamin D binding protein)##BC022310|GC|2638|group-specific component (vitamin D binding protein)##X03178|GC|2638|group-specific component (vitamin D binding protein)##AK315853|GC|2638|group-specific component (vitamin D binding protein)##NM_000583|GC|2638|group-specific component (vitamin D binding protein)##AK309595|GC|2638|group-specific component (vitamin D binding protein)##NM_001204307|GC|2638|group-specific component (vitamin D binding protein)##AK223458|GC|2638|group-specific component (vitamin D binding protein)##NM_001204306|GC|2638|group-specific component (vitamin D binding protein)	0.960889	CTCF.p2:-14:0.961
chr7	123741382	123741516	reg1021726.p1	7.609	+	TSC_hg19_v1_chr7_-_123673486 NM_001136002	-67945	-	AK292229 NM_001174045 NM_001174046 AY920280 AY920281	-175529	+	NM_001174044 NM_003117 NM_153189 AY920278 AY920279 S67798 BC026163	-176123	+	AF502281 CU691802 AB464545 AF017262 TSC_hg19_v1_chr7_-_124405121	663626	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	664347	-	BC130600 BC130604 NM_001024603	689353	-	NM_001136002|TMEM229A|730130|transmembrane protein 229A##AK292229|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174045|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174046|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920280|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920281|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174044|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_003117|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_153189|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920278|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920279|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##S67798|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##BC026163|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AF502281|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##AF017262|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872	0.966605	CTCF.p2:-14:0.967
chr20	33680606	33680730	reg1017746.p1	7.608	+	TSC_hg19_v1_chr20_-_33680611 AK298958 AK303476 AK315582 NM_015638 NM_199368	-28	-	TSC_hg19_v1_chr20_-_33680600 AK074106	-72	-	TSC_hg19_v1_chr20_-_33680592 AB590540 CU680522 BC013144	-196	-	AK096016 AK298794 TSC_hg19_v1_chr20_-_33734933	54245	-	CR457266 CU674674 TSC_hg19_v1_chr20_-_33735112 BC016184 AK300212 AY358580 BC001371 AK023931 AK303816 AK001645 NM_001145025 NM_018217	54456	-	AK314887 NM_006404 BC014451 X89079 L35545 CR456948 DQ892834 DQ896081	79197	+	AK298958|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK303476|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK315582|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##NM_015638|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##NM_199368|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK074106|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##BC013144|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK096016|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK298794|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##CR457266|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##BC016184|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK300212|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AY358580|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##BC001371|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK023931|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK303816|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK001645|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##NM_001145025|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##NM_018217|EDEM2|55741|ER degradation enhancer, mannosidase alpha-like 2##AK314887|PROCR|10544|protein C receptor, endothelial##NM_006404|PROCR|10544|protein C receptor, endothelial##BC014451|PROCR|10544|protein C receptor, endothelial##X89079|PROCR|10544|protein C receptor, endothelial##L35545|PROCR|10544|protein C receptor, endothelial##CR456948|PROCR|10544|protein C receptor, endothelial##DQ892834|PROCR|10544|protein C receptor, endothelial##DQ896081|PROCR|10544|protein C receptor, endothelial	0.0	
chr14	76981107	76981202	reg1018163.p2	7.607	+	NM_004452	-143465	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-362848	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-362877	+	TSC_hg19_v1_chr14_+_77227817 AK094330	246646	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	247301	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	247898	+	NM_004452|ESRRB|2103|estrogen-related receptor beta##AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1	0.628882	CTCF.p2:-7:0.629
chr5	36305932	36306065	reg1020362.p1	7.607	+	BC017951 AK058151 AK302947 TSC_hg19_v1_chr5_-_36302002 BC047660 NM_001161429 NM_145000	-3994	-	BC062567 NM_153013 AK304009	-63687	-	NM_001085411 TSC_hg19_v1_chr5_-_36241996	-64010	-	NM_001166696 NM_004172	300458	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	300730	+	NM_001166695 U03504 AB529121 AY954110 TSC_hg19_v1_chr5_+_36608562	302498	+	BC017951|RANBP3L|202151|RAN binding protein 3-like##AK058151|RANBP3L|202151|RAN binding protein 3-like##AK302947|RANBP3L|202151|RAN binding protein 3-like##BC047660|RANBP3L|202151|RAN binding protein 3-like##NM_001161429|RANBP3L|202151|RAN binding protein 3-like##NM_145000|RANBP3L|202151|RAN binding protein 3-like##BC062567|NADKD1|133686|NAD kinase domain containing 1##NM_153013|NADKD1|133686|NAD kinase domain containing 1##AK304009|NADKD1|133686|NAD kinase domain containing 1##NM_001085411|NADKD1|133686|NAD kinase domain containing 1##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	0.938198	CTCF.p2:23:0.938
chr9	140667045	140667175	reg1018016.p1	7.607	+	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	-28581	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-153643	+	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	-153667	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	105124	+	TSC_hg19_v1_chr9_+_140918045 AB209467	250964	+	TSC_hg19_v1_chr9_+_141044539 AK308459	377441	+	AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AK308459|TUBBP5|643224|tubulin, beta pseudogene 5	0.02148	
chr4	5826509	5826641	reg1020368.p1	7.606	+	TSC_hg19_v1_chr4_+_5712929 AF216184 AF216185 NM_153717 BC085608 AF239742	-113578	+	AY152402 AY152403 NM_001166136	-115301	-	AY185210 NM_147127 TSC_hg19_v1_chr4_-_5710299	-116275	-	AK091696 TSC_hg19_v1_chr4_-_5828628	2033	-	BT006806 CU674102 DQ892528 DQ895740 TSC_hg19_v1_chr4_-_5889997	63421	-	D78012 TSC_hg19_v1_chr4_-_5890210 AK127754 BC000252 BC007613 AK309379	63614	-	AF216184|EVC|2121|Ellis van Creveld syndrome##AF216185|EVC|2121|Ellis van Creveld syndrome##NM_153717|EVC|2121|Ellis van Creveld syndrome##BC085608|EVC|2121|Ellis van Creveld syndrome##AF239742|EVC|2121|Ellis van Creveld syndrome##AY152402|EVC2|132884|Ellis van Creveld syndrome 2##AY152403|EVC2|132884|Ellis van Creveld syndrome 2##NM_001166136|EVC2|132884|Ellis van Creveld syndrome 2##AY185210|EVC2|132884|Ellis van Creveld syndrome 2##NM_147127|EVC2|132884|Ellis van Creveld syndrome 2##AK091696|CRMP1|1400|collapsin response mediator protein 1##BT006806|CRMP1|1400|collapsin response mediator protein 1##DQ892528|CRMP1|1400|collapsin response mediator protein 1##DQ895740|CRMP1|1400|collapsin response mediator protein 1##D78012|CRMP1|1400|collapsin response mediator protein 1##AK127754|CRMP1|1400|collapsin response mediator protein 1##BC000252|CRMP1|1400|collapsin response mediator protein 1##BC007613|CRMP1|1400|collapsin response mediator protein 1##AK309379|CRMP1|1400|collapsin response mediator protein 1	0.895462	CTCF.p2:0:0.895
chr7	6598609	6598720	reg1018206.p2	7.606	+	NM_001145118	-7598	-	DQ892879 DQ896128 CU675925 CU680460 CU687206 X63745 TSC_hg19_v1_chr7_-_6523784 BC008081 BC012994 BC071982 AK127440 AK315702 NM_001100603 NM_006854	-74896	-	TSC_hg19_v1_chr7_-_6487586 AK075128 AK074744 AF450090 NM_001142936 NM_139179	-111056	-	TSC_hg19_v1_chr7_+_6617111 AK223532 NM_001134387 NM_001134388 NM_001134389 NM_018106 AK001341 AK308971 AL136674 BC001239 AY359090	18454	+	TSC_hg19_v1_chr7_+_6629662 BC001076 BC005121 AK056149 NM_024067	31122	+	NM_017560	56862	+	NM_001145118|GRID2IP|392862|glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein##DQ892879|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##DQ896128|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##X63745|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC008081|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC012994|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC071982|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##AK315702|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##NM_001100603|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##NM_006854|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##AK075128|DAGLB|221955|diacylglycerol lipase, beta##AK074744|DAGLB|221955|diacylglycerol lipase, beta##AF450090|DAGLB|221955|diacylglycerol lipase, beta##NM_001142936|DAGLB|221955|diacylglycerol lipase, beta##NM_139179|DAGLB|221955|diacylglycerol lipase, beta##AK223532|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134387|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134388|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134389|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_018106|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK001341|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK308971|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AL136674|ZDHHC4|55146|zinc finger, DHHC-type containing 4##BC001239|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AY359090|ZDHHC4|55146|zinc finger, DHHC-type containing 4##BC001076|C7orf26|79034|chromosome 7 open reading frame 26##BC005121|C7orf26|79034|chromosome 7 open reading frame 26##AK056149|C7orf26|79034|chromosome 7 open reading frame 26##NM_024067|C7orf26|79034|chromosome 7 open reading frame 26##NM_017560|ZNF853|54753|zinc finger protein 853	0.341192	CTCF.p2:15:0.341
chr9	34633992	34634099	reg1017723.p1	7.606	+	NM_001017363 AB463419	-6035	-	TSC_hg19_v1_chr9_-_34620504 AK091661 AX747117	-13529	-	TSC_hg19_v1_chr9_-_34620493 NM_007234 NM_024348	-13552	-	TSC_hg19_v1_chr9_-_34637743 AF226604 CR457075 DQ644568 DQ647702 DQ656583 DQ892881 DQ896130 AK098451 BC004899 BC010104 BC007839 U75283 AK299130 AK222899 AK291092	3642	-	TSC_hg19_v1_chr9_-_34637753 AY633611 NM_005866 NM_147157 U79528 BC006307	3723	-	TSC_hg19_v1_chr9_-_34637804 AK130502	3756	-	NM_001017363|ARID3C|138715|AT rich interactive domain 3C (BRIGHT-like)##AK091661|DCTN3|11258|dynactin 3 (p22)##NM_007234|DCTN3|11258|dynactin 3 (p22)##NM_024348|DCTN3|11258|dynactin 3 (p22)##AF226604|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##CR457075|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##DQ644568|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##DQ647702|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##DQ656583|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##DQ892881|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##DQ896130|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##AK098451|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##BC004899|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##BC010104|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##BC007839|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##U75283|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##AK299130|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##AK222899|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##AK291092|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##AY633611|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##NM_005866|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##NM_147157|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##U79528|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##BC006307|SIGMAR1|10280|sigma non-opioid intracellular receptor 1##AK130502|SIGMAR1|10280|sigma non-opioid intracellular receptor 1	0.964576	CTCF.p2:13:0.965
chr19	13388913	13389024	reg1008284.p2	7.605	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-124788	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-127676	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-127829	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	228208	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	453611	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	469751	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.999934	CTCF.p2:0:1.000
chr9	117300669	117300835	reg1018834.p2	7.605	+	BC142684 TSC_hg19_v1_chr9_-_117267731 AK056190 BC142614 NM_001173425 NM_015404	-33022	-	AL110228 NM_001083885	-35279	-	AY703039 AK126136 TSC_hg19_v1_chr9_-_117160753	-140001	-	NM_004888 TSC_hg19_v1_chr9_+_117350048 BC003564 AF038954 BC008452	49286	+	TSC_hg19_v1_chr9_+_117350103 CU678965 CR456971 CR542237	49355	+	TSC_hg19_v1_chr9_+_117373735 NM_153045 AK289383 BC107133 BC107134 BX649023	73017	+	BC142684|DFNB31|25861|deafness, autosomal recessive 31##AK056190|DFNB31|25861|deafness, autosomal recessive 31##BC142614|DFNB31|25861|deafness, autosomal recessive 31##NM_001173425|DFNB31|25861|deafness, autosomal recessive 31##NM_015404|DFNB31|25861|deafness, autosomal recessive 31##AL110228|DFNB31|25861|deafness, autosomal recessive 31##NM_001083885|DFNB31|25861|deafness, autosomal recessive 31##AY703039|AKNA|80709|AT-hook transcription factor##AK126136|AKNA|80709|AT-hook transcription factor##NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##CR456971|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##CR542237|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##NM_153045|C9orf91|203197|chromosome 9 open reading frame 91##AK289383|C9orf91|203197|chromosome 9 open reading frame 91##BC107133|C9orf91|203197|chromosome 9 open reading frame 91##BC107134|C9orf91|203197|chromosome 9 open reading frame 91##BX649023|C9orf91|203197|chromosome 9 open reading frame 91	0.020958	
chr13	52009277	52009420	reg1021434.p1	7.604	+	AX772926 NM_001101320 AM402969	-94153	+	TSC_hg19_v1_chr13_+_51796507 BC034497 NM_001242312 NM_145019 AK055269 AK096364 BC051771 AB527542 CU690842	-212832	+	BC001397 BC005088 BC007332 BC010174 TSC_hg19_v1_chr13_+_51484193	-525191	+	AF097645 BC039829 BC018725 BC013358 BC032386 TSC_hg19_v1_chr13_-_52027173 AK296801 AK304218	17805	-	NM_001039937 NM_001039938 NM_012141 AL833524 TSC_hg19_v1_chr13_-_52027409	17994	-	TSC_hg19_v1_chr13_+_52027481 BC030118 BC045725	18125	+	AX772926|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##NM_001101320|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AM402969|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##BC034497|FAM124A|220108|family with sequence similarity 124A##NM_001242312|FAM124A|220108|family with sequence similarity 124A##NM_145019|FAM124A|220108|family with sequence similarity 124A##AK055269|FAM124A|220108|family with sequence similarity 124A##AK096364|FAM124A|220108|family with sequence similarity 124A##BC051771|FAM124A|220108|family with sequence similarity 124A##BC001397|RNASEH2B|79621|ribonuclease H2, subunit B##BC005088|RNASEH2B|79621|ribonuclease H2, subunit B##BC007332|RNASEH2B|79621|ribonuclease H2, subunit B##BC010174|RNASEH2B|79621|ribonuclease H2, subunit B##AF097645|INTS6|26512|integrator complex subunit 6##BC039829|INTS6|26512|integrator complex subunit 6##BC018725|INTS6|26512|integrator complex subunit 6##BC013358|INTS6|26512|integrator complex subunit 6##BC032386|INTS6|26512|integrator complex subunit 6##AK296801|INTS6|26512|integrator complex subunit 6##AK304218|INTS6|26512|integrator complex subunit 6##NM_001039937|INTS6|26512|integrator complex subunit 6##NM_001039938|INTS6|26512|integrator complex subunit 6##NM_012141|INTS6|26512|integrator complex subunit 6##AL833524|INTS6|26512|integrator complex subunit 6	0.0	
chr3	122177970	122178126	reg1018062.p2	7.604	+	BC025762 NM_019069 TSC_hg19_v1_chr3_-_122134925	-43131	-	NM_014367 AK026030 BC010896 BC015060 AF201944 AF107495 AF250321 TSC_hg19_v1_chr3_+_122103076 AK293994 AF191020	-74980	+	BC019231 BC109378 TSC_hg19_v1_chr3_-_122102079 BC054051 BC062725 NM_001017928	-75971	-	S75295 TSC_hg19_v1_chr3_-_122233757 BC090864	55652	-	TSC_hg19_v1_chr3_-_122233764 BC002374 BC003009 AK312713	55724	-	TSC_hg19_v1_chr3_-_122233782 NM_002264	55738	-	BC025762|WDR5B|54554|WD repeat domain 5B##NM_019069|WDR5B|54554|WD repeat domain 5B##NM_014367|FAM162A|26355|family with sequence similarity 162, member A##AK026030|FAM162A|26355|family with sequence similarity 162, member A##BC010896|FAM162A|26355|family with sequence similarity 162, member A##BC015060|FAM162A|26355|family with sequence similarity 162, member A##AF201944|FAM162A|26355|family with sequence similarity 162, member A##AF107495|FAM162A|26355|family with sequence similarity 162, member A##AF250321|FAM162A|26355|family with sequence similarity 162, member A##AK293994|FAM162A|26355|family with sequence similarity 162, member A##AF191020|FAM162A|26355|family with sequence similarity 162, member A##BC109378|CCDC58|131076|coiled-coil domain containing 58##BC054051|CCDC58|131076|coiled-coil domain containing 58##BC062725|CCDC58|131076|coiled-coil domain containing 58##NM_001017928|CCDC58|131076|coiled-coil domain containing 58##S75295|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC090864|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC002374|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC003009|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##AK312713|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##NM_002264|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)	0.999071	CTCF.p2:-18:0.999
chr14	24008935	24009044	reg1018741.p2	7.603	+	TSC_hg19_v1_chr14_+_23938911 AK291875 AL050003 BC030817 AK022215 CU689028 EU832521 EU832603	-70076	+	TSC_hg19_v1_chr14_+_23938899 NM_001042635 NM_015514 AK124318	-70098	+	M58018 TSC_hg19_v1_chr14_-_23904870 AK307590 EU747717 NM_000257	-104130	-	BC131533 TSC_hg19_v1_chr14_-_24020861 AB028979 NM_033400	11831	-	TSC_hg19_v1_chr14_+_24025262 NM_001126339 NM_024328 BX161435 AK098604 AK057691 BC002984	16353	+	AK310524 TSC_hg19_v1_chr14_-_24025427	16449	-	AK291875|NGDN|25983|neuroguidin, EIF4E binding protein##AL050003|NGDN|25983|neuroguidin, EIF4E binding protein##BC030817|NGDN|25983|neuroguidin, EIF4E binding protein##AK022215|NGDN|25983|neuroguidin, EIF4E binding protein##EU832521|NGDN|25983|neuroguidin, EIF4E binding protein##EU832603|NGDN|25983|neuroguidin, EIF4E binding protein##NM_001042635|NGDN|25983|neuroguidin, EIF4E binding protein##NM_015514|NGDN|25983|neuroguidin, EIF4E binding protein##AK124318|NGDN|25983|neuroguidin, EIF4E binding protein##M58018|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##AK307590|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##EU747717|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##NM_000257|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##BC131533|ZFHX2|85446|zinc finger homeobox 2##AB028979|ZFHX2|85446|zinc finger homeobox 2##NM_033400|ZFHX2|85446|zinc finger homeobox 2##NM_001126339|THTPA|79178|thiamine triphosphatase##NM_024328|THTPA|79178|thiamine triphosphatase##BX161435|THTPA|79178|thiamine triphosphatase##AK098604|THTPA|79178|thiamine triphosphatase##AK057691|THTPA|79178|thiamine triphosphatase##BC002984|THTPA|79178|thiamine triphosphatase	0.83796	CTCF.p2:7:0.838
chr7	37956798	37956908	reg1018187.p1	7.603	+	TSC_hg19_v1_chr7_-_37956526 BC032828 NM_003014	-333	-	AF026692 BC047684 BC058911 AK313029 TSC_hg19_v1_chr7_-_37956420 AK303977 AK302357	-442	-	BC036816 NM_016616	-68655	+	AY027862 NM_001242946 NM_017549 TSC_hg19_v1_chr7_+_37960259 BC018299	3370	+	BC000686 AK290885 TSC_hg19_v1_chr7_+_37960509 DQ914439 AJ250475	3700	+	NM_001242948 AK309180	4074	+	BC032828|SFRP4|6424|secreted frizzled-related protein 4##NM_003014|SFRP4|6424|secreted frizzled-related protein 4##AF026692|SFRP4|6424|secreted frizzled-related protein 4##BC047684|SFRP4|6424|secreted frizzled-related protein 4##BC058911|SFRP4|6424|secreted frizzled-related protein 4##AK313029|SFRP4|6424|secreted frizzled-related protein 4##AK303977|SFRP4|6424|secreted frizzled-related protein 4##AK302357|SFRP4|6424|secreted frizzled-related protein 4##BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##AY027862|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_001242946|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_017549|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC018299|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC000686|EPDR1|54749|ependymin related protein 1 (zebrafish)##AK290885|EPDR1|54749|ependymin related protein 1 (zebrafish)##DQ914439|EPDR1|54749|ependymin related protein 1 (zebrafish)##AJ250475|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_001242948|EPDR1|54749|ependymin related protein 1 (zebrafish)##AK309180|EPDR1|54749|ependymin related protein 1 (zebrafish)	0.486115	CTCF.p2:2:0.486
chr2	103320329	103320465	reg1020836.p1	7.602	+	BC136377 BC136378 BC035787 NM_003048 AF073299	-84214	+	CR627411 NM_001011552	-230636	+	AK300026 AF077346 NM_003853	-285197	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	32936	-	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	32985	+	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	58185	+	BC136377|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC136378|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC035787|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##NM_003048|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AF073299|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##CR627411|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##NM_001011552|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein##AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein##NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182##CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182	0.534001	CTCF.p2:11:0.534
chr7	6978077	6978191	reg1019848.p1	7.602	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-112236	-	AK296026 CU679629 AK000993 TSC_hg19_v1_chr7_-_6865849	-112296	-	AK314983 BC034495 NM_001099697 NM_173565	-184395	+	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	244113	+	BC136892 BC144431 AJ890451 NM_001037763	597320	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	628454	+	BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK296026|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK000993|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)	0.989712	CTCF.p2:2:0.990
chr1	173398731	173398874	reg1017942.p1	7.600	+	CR542033 D90224 X79929 NM_003326	-222410	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	-224149	-	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	-378746	-	TSC_hg19_v1_chr1_-_173446300 AK127238	47506	-	TSC_hg19_v1_chr1_+_173446473 AK300680	47671	+	TSC_hg19_v1_chr1_+_173446484 BC035857 NM_004905 AK289352 BC025421 D14662 BC053550 CU690218 AJ844621	47725	+	CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK127238|LOC100506023|100506023|uncharacterized LOC100506023##AK300680|PRDX6|9588|peroxiredoxin 6##BC035857|PRDX6|9588|peroxiredoxin 6##NM_004905|PRDX6|9588|peroxiredoxin 6##AK289352|PRDX6|9588|peroxiredoxin 6##BC025421|PRDX6|9588|peroxiredoxin 6##D14662|PRDX6|9588|peroxiredoxin 6##BC053550|PRDX6|9588|peroxiredoxin 6##AJ844621|PRDX6|9588|peroxiredoxin 6	0.013388	
chr2	172992103	172992233	reg1021197.p1	7.600	+	AK291367 AK316129 TSC_hg19_v1_chr2_-_172967629	-24539	-	TSC_hg19_v1_chr2_-_172967234 HQ258018 AB208823 AK297503 BC032558 NM_004405	-24813	-	L07919 TSC_hg19_v1_chr2_-_172967055	-25134	-	AK311695 AK296496 TSC_hg19_v1_chr2_+_173292147	299959	+	TSC_hg19_v1_chr2_+_173292316 NM_000210 NM_001079818 BC007002	300152	+	TSC_hg19_v1_chr2_+_173292395 X53586 BC136455 BC136456 X59512 AB208842	300311	+	AK291367|DLX2|1746|distal-less homeobox 2##AK316129|DLX2|1746|distal-less homeobox 2##HQ258018|DLX2|1746|distal-less homeobox 2##AB208823|DLX2|1746|distal-less homeobox 2##AK297503|DLX2|1746|distal-less homeobox 2##BC032558|DLX2|1746|distal-less homeobox 2##NM_004405|DLX2|1746|distal-less homeobox 2##L07919|DLX2|1746|distal-less homeobox 2##AK311695|ITGA6|3655|integrin, alpha 6##AK296496|ITGA6|3655|integrin, alpha 6##NM_000210|ITGA6|3655|integrin, alpha 6##NM_001079818|ITGA6|3655|integrin, alpha 6##BC007002|ITGA6|3655|integrin, alpha 6##X53586|ITGA6|3655|integrin, alpha 6##BC136455|ITGA6|3655|integrin, alpha 6##BC136456|ITGA6|3655|integrin, alpha 6##X59512|ITGA6|3655|integrin, alpha 6##AB208842|ITGA6|3655|integrin, alpha 6	0.996083	CTCF.p2:3:0.996
chr9	82086642	82086748	reg1016978.p1	7.600	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	-1174637	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	-1235665	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-1440511	-	TSC_hg19_v1_chr9_+_82186879 NM_007005	100191	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	100829	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	100990	+	AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.229775	CTCF.p2:-11:0.230
chr15	56190039	56190160	reg1017250.p1	7.599	+	AY630258 NM_173814 TSC_hg19_v1_chr15_-_56035276	-154873	-	AF457207 NM_015617	-309050	-	EF625686 TSC_hg19_v1_chr15_-_55880544	-309567	-	BC136605 BC144284 BC144285 AL832063 NM_198400	19217	-	TSC_hg19_v1_chr15_-_56285776 BC035707 AK304394 AY550969 BC152452 BC152562 D42055 NM_006154	95696	-	TSC_hg19_v1_chr15_-_56388663 AL832584	198598	-	AY630258|PRTG|283659|protogenin##NM_173814|PRTG|283659|protogenin##AF457207|PYGO1|26108|pygopus homolog 1 (Drosophila)##NM_015617|PYGO1|26108|pygopus homolog 1 (Drosophila)##EF625686|PYGO1|26108|pygopus homolog 1 (Drosophila)##BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832584|RFX7|64864|regulatory factor X, 7	0.999594	CTCF.p2:-7:1.000
chr1	59235060	59235201	reg1021574.p1	7.599	+	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-69378	-	TSC_hg19_v1_chr1_-_59147727 BC017579	-87384	-	NM_002353	-191965	-	TSC_hg19_v1_chr1_-_59248287 BC009874	13235	-	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	14605	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	527482	+	BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_002353|TACSTD2|4070|tumor-associated calcium signal transducer 2##BC009874|JUN|3725|jun proto-oncogene##BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing	0.980529	CTCF.p2:-14:0.981
chr14	68875528	68875629	reg1016615.p1	7.598	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-589058	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-592279	-	AK315462 NM_152443	-706976	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	384142	-	NM_001244698 NM_004926	385052	-	NM_001244701 AB528867	387406	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.575456	CTCF.p2:9:0.575
chr15	31151613	31151736	reg1019822.p1	7.598	+	BC105788 NM_001039841	-232796	+	TSC_hg19_v1_chr15_+_30918372 BC071990	-233288	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-465962	-	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	44400	+	CR936734 CR936727 TSC_hg19_v1_chr15_+_31196114 AB023235	44443	+	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	132093	-	BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936734|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936727|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AB023235|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10	0.472358	CTCF.p2:7:0.472
chr8	31042947	31043061	reg1017909.p1	7.598	+	TSC_hg19_v1_chr8_+_30891325 AF091214	-151713	+	AF195513 AY077841 NM_001015508	-151774	-	NM_000553	-152227	+	NM_013962	454263	+	AK298132 NM_001160002 NM_001160004 NM_001160005 NM_001160007 NM_001160008 NM_004495 NM_013956 NM_013957 NM_013958 NM_013960 NM_013964 M94168 BC006492 TSC_hg19_v1_chr8_+_32405834 M94167 AF026146 AK097005 AK290730 L12261	1362785	+	AK289927 NM_013959	1461246	+	AF091214|WRN|7486|Werner syndrome, RecQ helicase-like##AF195513|PURG|29942|purine-rich element binding protein G##AY077841|PURG|29942|purine-rich element binding protein G##NM_001015508|PURG|29942|purine-rich element binding protein G##NM_000553|WRN|7486|Werner syndrome, RecQ helicase-like##NM_013962|NRG1|3084|neuregulin 1##AK298132|NRG1|3084|neuregulin 1##NM_001160002|NRG1|3084|neuregulin 1##NM_001160004|NRG1|3084|neuregulin 1##NM_001160005|NRG1|3084|neuregulin 1##NM_001160007|NRG1|3084|neuregulin 1##NM_001160008|NRG1|3084|neuregulin 1##NM_004495|NRG1|3084|neuregulin 1##NM_013956|NRG1|3084|neuregulin 1##NM_013957|NRG1|3084|neuregulin 1##NM_013958|NRG1|3084|neuregulin 1##NM_013960|NRG1|3084|neuregulin 1##NM_013964|NRG1|3084|neuregulin 1##M94168|NRG1|3084|neuregulin 1##BC006492|NRG1|3084|neuregulin 1##M94167|NRG1|3084|neuregulin 1##AF026146|NRG1|3084|neuregulin 1##AK097005|NRG1|3084|neuregulin 1##AK290730|NRG1|3084|neuregulin 1##L12261|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1	0.988911	CTCF.p2:-4:0.989
chrX	119021777	119021844	reg1021026.p1	7.598	+	TSC_hg19_v1_chrX_+_119005794 BC000266 U54993 X81900 AB451304 AB451435 CR456889	-15979	+	NM_004541 TSC_hg19_v1_chrX_+_119005781	-16051	+	AB464688 BT007175 CU676558 BC000832 TSC_hg19_v1_chrX_-_119005683 BC128440 BC020556 AK314778 X98253 NM_006978	-16128	-	BC066357 NM_001008534 NM_001008535 NM_178813	8057	+	CU677277 CU689374 BC032442 BC015354 BC016783 BC000940 BC012770 TSC_hg19_v1_chrX_-_119077709 BC018968 BC071686 AL832118 AK026279 AY388958 NM_024528	55863	-	AB464156 DQ890992 DQ894169 BC021719 AK058125 AL590524 AF317219 AL590526 NM_001099685 NM_032498	189801	-	BC000266|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##U54993|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##X81900|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##AB451304|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##AB451435|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##CR456889|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##NM_004541|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##BT007175|RNF113A|7737|ring finger protein 113A##BC000832|RNF113A|7737|ring finger protein 113A##BC020556|RNF113A|7737|ring finger protein 113A##AK314778|RNF113A|7737|ring finger protein 113A##X98253|RNF113A|7737|ring finger protein 113A##NM_006978|RNF113A|7737|ring finger protein 113A##BC066357|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_001008534|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_001008535|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_178813|AKAP14|158798|A kinase (PRKA) anchor protein 14##BC032442|NKAP|79576|NFKB activating protein##BC015354|NKAP|79576|NFKB activating protein##BC016783|NKAP|79576|NFKB activating protein##BC000940|NKAP|79576|NFKB activating protein##BC012770|NKAP|79576|NFKB activating protein##BC018968|NKAP|79576|NFKB activating protein##BC071686|NKAP|79576|NFKB activating protein##AL832118|NKAP|79576|NFKB activating protein##AK026279|NKAP|79576|NFKB activating protein##AY388958|NKAP|79576|NFKB activating protein##NM_024528|NKAP|79576|NFKB activating protein##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2	0.781784	CTCF.p2:-43:0.782
chr12	81662461	81662642	reg1018114.p2	7.596	+	TSC_hg19_v1_chr12_+_81471857 BC009317 BC015769 NM_024560 AK025616 AX764482	-190693	+	TSC_hg19_v1_chr12_-_81331487 AB528898 CR407680 BC099921 AK315321 BC046926 BC062332 BC118609 BC122561 AF087693 AF173081 NM_004664	-330961	-	TSC_hg19_v1_chr12_-_81331470 AK309256	-331084	-	AK123372 AK296380 NM_001220479 NM_001220480	100608	-	AK294505 AK297372 AK299853 NM_001220477 NM_001220478	329503	-	BC104912 BC143485 NM_001220475 NM_001220476 AK126971 TSC_hg19_v1_chr12_-_82152435 AB210009 NM_001220473 NM_001220474	489820	-	BC009317|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##BC015769|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##NM_024560|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AK025616|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AX764482|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)##BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)##AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)##BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)##BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)##BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)##BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)##AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)##AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)##NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)##AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)##AK123372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK296380|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220479|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220480|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC104912|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC143485|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220475|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220476|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK126971|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AB210009|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220473|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220474|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	0.264856	CTCF.p2:-42:0.265
chr15	42066738	42066869	reg1017866.p1	7.596	+	BC036660 NM_001128608 NM_014994 TSC_hg19_v1_chr15_+_42066666 BX648786	-145	+	AB011090 TSC_hg19_v1_chr15_+_42052630	-14200	+	TSC_hg19_v1_chr15_+_41952661 AK055203	-114151	+	AK302482 TSC_hg19_v1_chr15_+_42066879 AL833267 AB011168 BC113983 BC114493 AK091616 AK292414	35	+	TSC_hg19_v1_chr15_+_42120310 AK289833 NM_001114632 NM_001198588 NM_005090 AB209150 AK000814 BC139899 AK000663 AK225503 AK000550 BC067834 AF065215 AK290051 DQ523799 DQ523800 AF121908 BC110415 BC025290 CU692962	53455	+	AK310651 NM_001114633 AK299419	64224	+	BC036660|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##NM_001128608|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##NM_014994|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BX648786|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AB011090|MGA|23269|MAX gene associated##AK055203|MGA|23269|MAX gene associated##AK302482|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AL833267|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AB011168|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BC113983|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BC114493|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK091616|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK292414|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK289833|JMJD7|100137047|jumonji domain containing 7##NM_001114632|JMJD7|100137047|jumonji domain containing 7##NM_001198588|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##NM_005090|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AB209150|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AK000814|JMJD7|100137047|jumonji domain containing 7##BC139899|JMJD7|100137047|jumonji domain containing 7##AK000663|JMJD7|100137047|jumonji domain containing 7##AK225503|JMJD7|100137047|jumonji domain containing 7##AK000550|JMJD7|100137047|jumonji domain containing 7##BC067834|JMJD7|100137047|jumonji domain containing 7##AF065215|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AK290051|JMJD7|100137047|jumonji domain containing 7##DQ523799|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##DQ523800|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AF121908|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##BC110415|JMJD7|100137047|jumonji domain containing 7##BC025290|JMJD7|100137047|jumonji domain containing 7##AK310651|PLA2G4B|100137049|phospholipase A2, group IVB (cytosolic)##NM_001114633|PLA2G4B|100137049|phospholipase A2, group IVB (cytosolic)##AK299419|PLA2G4B|100137049|phospholipase A2, group IVB (cytosolic)	0.0	
chr2	33605159	33605306	reg1016649.p1	7.596	+	TSC_hg19_v1_chr2_+_33359657 NM_000627 NM_001166264 NM_001166265 NM_001166266 AB208801 BC130289 BC144127 BC144128 M34057 AB384737 AF489528	-245527	+	NM_206943	-432864	+	NM_001193509 NM_017735 AK299196 BC063791 TSC_hg19_v1_chr2_+_32853177 AK027570	-752098	+	AK125551 TSC_hg19_v1_chr2_+_33661417 BC027849 NM_170672 AK292983	56216	+	NM_001139488	96088	+	TSC_hg19_v1_chr2_+_33701715 BX647990	96464	+	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1##AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1##M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1##AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_206943|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001193509|TTC27|55622|tetratricopeptide repeat domain 27##NM_017735|TTC27|55622|tetratricopeptide repeat domain 27##AK299196|TTC27|55622|tetratricopeptide repeat domain 27##BC063791|TTC27|55622|tetratricopeptide repeat domain 27##AK027570|TTC27|55622|tetratricopeptide repeat domain 27##AK125551|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC027849|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_170672|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK292983|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_001139488|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)	0.942242	CTCF.p2:16:0.796
chr16	53164461	53164563	reg1018352.p2	7.595	+	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	-31413	+	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	-75631	+	AK299202 NM_001146188	-582799	-	TSC_hg19_v1_chr16_+_53164923 DQ333316	548	+	NM_001207030	240528	-	TSC_hg19_v1_chr16_+_53468350 NM_005611	303840	+	AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_001207030|LOC643802|643802|u3 small nucleolar ribonucleoprotein protein MPP10-like##NM_005611|RBL2|5934|retinoblastoma-like 2 (p130)	0.04101	
chr5	141205869	141205983	reg1020377.p1	7.595	+	TSC_hg19_v1_chr5_-_141061801 NM_022481	-144109	-	AJ310567 TSC_hg19_v1_chr5_-_141061794 AK091385 AX746950 AK290052	-144154	-	TSC_hg19_v1_chr5_-_141030986 AY217346 NM_033449	-174943	-	CU690208 TSC_hg19_v1_chr5_-_141257848	51913	-	BC035812 NM_002587 NM_032420 BC051287 BC075821 TSC_hg19_v1_chr5_-_141257976 AK289512	52033	-	TSC_hg19_v1_chr5_+_141303403 NM_001142603 NM_014773 BC007855 D50931 AK292869	97483	+	NM_022481|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AJ310567|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK091385|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK290052|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AY217346|FCHSD1|89848|FCH and double SH3 domains 1##NM_033449|FCHSD1|89848|FCH and double SH3 domains 1##BC035812|PCDH1|5097|protocadherin 1##NM_002587|PCDH1|5097|protocadherin 1##NM_032420|PCDH1|5097|protocadherin 1##BC051287|PCDH1|5097|protocadherin 1##BC075821|PCDH1|5097|protocadherin 1##AK289512|PCDH1|5097|protocadherin 1##NM_001142603|KIAA0141|9812|KIAA0141##NM_014773|KIAA0141|9812|KIAA0141##BC007855|KIAA0141|9812|KIAA0141##D50931|KIAA0141|9812|KIAA0141##AK292869|KIAA0141|9812|KIAA0141	0.834336	CTCF.p2:13:0.834
chr1	186124897	186125029	reg1018070.p2	7.594	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	-421387	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-838493	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-838644	-	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	140444	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	219294	-	BC016514 TSC_hg19_v1_chr1_-_186344361	219382	-	AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)##BC016514|TPR|7175|translocated promoter region (to activated MET oncogene)	0.089734	
chr3	197777795	197777894	reg1015586.p1	7.594	+	AJ312398 AJ312399 NM_001136049 NM_033029 TSC_hg19_v1_chr3_+_197687092 AL832783 AB527180 AM920777 AK299119 AM920778	-90746	+	BC016156 TSC_hg19_v1_chr3_-_197686873 AK095094 AL136889 NM_032263	-90980	-	BC010949 TSC_hg19_v1_chr3_+_197677063 AY871273 NM_000996 AB055768 X52966 AK026542 BC001037 BC061890 BC017093	-100768	+	BC042518 TSC_hg19_v1_chr3_-_197807579 BC053879	29731	-	NM_001145248	101392	+	None	None	None	AJ312398|LMLN|89782|leishmanolysin-like (metallopeptidase M8 family)##AJ312399|LMLN|89782|leishmanolysin-like (metallopeptidase M8 family)##NM_001136049|LMLN|89782|leishmanolysin-like (metallopeptidase M8 family)##NM_033029|LMLN|89782|leishmanolysin-like (metallopeptidase M8 family)##AL832783|LMLN|89782|leishmanolysin-like (metallopeptidase M8 family)##AM920777|LMLN|89782|leishmanolysin-like (metallopeptidase M8 family)##AK299119|LMLN|89782|leishmanolysin-like (metallopeptidase M8 family)##AM920778|LMLN|89782|leishmanolysin-like (metallopeptidase M8 family)##BC016156|IQCG|84223|IQ motif containing G##AK095094|IQCG|84223|IQ motif containing G##AL136889|IQCG|84223|IQ motif containing G##NM_032263|IQCG|84223|IQ motif containing G##BC010949|RPL35A|6165|ribosomal protein L35a##AY871273|RPL35A|6165|ribosomal protein L35a##NM_000996|RPL35A|6165|ribosomal protein L35a##AB055768|RPL35A|6165|ribosomal protein L35a##X52966|RPL35A|6165|ribosomal protein L35a##AK026542|RPL35A|6165|ribosomal protein L35a##BC001037|RPL35A|6165|ribosomal protein L35a##BC061890|RPL35A|6165|ribosomal protein L35a##BC017093|RPL35A|6165|ribosomal protein L35a##BC042518|ANKRD18DP|348840|ankyrin repeat domain 18D, pseudogene##BC053879|ANKRD18DP|348840|ankyrin repeat domain 18D, pseudogene##NM_001145248|FAM157A|728262|family with sequence similarity 157, member A	0.830069	CTCF.p2:1:0.830
chr11	78426901	78427000	reg1016463.p2	7.593	+	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-141055	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-141158	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	-298074	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	724774	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	4017948	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	4184567	-	AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_080491|GAB2|9846|GRB2-associated binding protein 2##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)	0.0	
chr1	109654784	109654905	reg1011365.p1	7.592	+	BC127904 BC141949 BC141950 BC150515 TSC_hg19_v1_chr1_+_109648698	-6199	+	BC071822 TSC_hg19_v1_chr1_+_109642814	-12030	+	BC066918 AK075191 TSC_hg19_v1_chr1_+_109633380 AF164793 AK310192 BC008739 BC065186 NM_020141 AK291293 BC067116	-21450	+	NM_001122961	1634	-	TSC_hg19_v1_chr1_+_109656510 AY358366	1675	+	TSC_hg19_v1_chr1_+_109656574 NM_020775	1756	+	BC071822|SCARNA2|677766|small Cajal body-specific RNA 2##BC066918|TMEM167B|56900|transmembrane protein 167B##AK075191|TMEM167B|56900|transmembrane protein 167B##AF164793|TMEM167B|56900|transmembrane protein 167B##AK310192|TMEM167B|56900|transmembrane protein 167B##BC008739|TMEM167B|56900|transmembrane protein 167B##BC065186|TMEM167B|56900|transmembrane protein 167B##NM_020141|TMEM167B|56900|transmembrane protein 167B##AK291293|TMEM167B|56900|transmembrane protein 167B##BC067116|TMEM167B|56900|transmembrane protein 167B##NM_001122961|C1orf194|127003|chromosome 1 open reading frame 194##AY358366|KIAA1324|57535|KIAA1324##NM_020775|KIAA1324|57535|KIAA1324	0.1362	
chr11	94336369	94336448	reg1014646.p1	7.592	+	NM_152431 AB079366 AK093475 AX748151 BC031060 DQ891240 DQ894425 AB590313 CU689100	-35830	+	TSC_hg19_v1_chr11_+_94277605 M58596	-58809	+	AK293616 NM_002033 TSC_hg19_v1_chr11_+_94277086 M58597 BC136373 BC136374	-59329	+	TSC_hg19_v1_chr11_+_94501528 BX648729 NM_130847 AK093699 AX748266 AF453742 BC037539 AK074084 AM393663	165181	+	TSC_hg19_v1_chr11_-_94706721 AK309042 AF110775 AF161497 AK225956 AK314900 BC032629 AJ250393 BC040946 BC006975	370314	-	TSC_hg19_v1_chr11_-_94706742 NM_016403	370349	-	NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)##AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)##AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)##BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##AK293616|PIWIL4|143689|piwi-like 4 (Drosophila)##NM_002033|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58597|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136373|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136374|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BX648729|AMOTL1|154810|angiomotin like 1##NM_130847|AMOTL1|154810|angiomotin like 1##AK093699|AMOTL1|154810|angiomotin like 1##AF453742|AMOTL1|154810|angiomotin like 1##BC037539|AMOTL1|154810|angiomotin like 1##AK074084|AMOTL1|154810|angiomotin like 1##AM393663|AMOTL1|154810|angiomotin like 1##AK309042|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AF110775|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AF161497|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AK225956|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AK314900|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC032629|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AJ250393|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC040946|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC006975|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##NM_016403|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)	0.359391	CTCF.p2:27:0.359
chr12	133177168	133177294	reg1018334.p1	7.592	+	NM_001142641	-110075	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-271374	-	AF458594 NM_021808	-486659	-	NM_001195520	9805	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	18173	+	BC021559 TSC_hg19_v1_chr12_-_133215909	38611	-	NM_001142641|FBRSL1|57666|fibrosin-like 1##BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC021559|POLE|5426|polymerase (DNA directed), epsilon	0.846333	CTCF.p2:-35:0.780
chr15	59131837	59131944	reg1018936.p1	7.592	+	BC060514 TSC_hg19_v1_chr15_+_59063500 AK297291 AK075319 AB075509 BC140811 BC144616	-68368	+	TSC_hg19_v1_chr15_+_59063396 AL833610 NM_001040450 NM_001040453	-68483	+	TSC_hg19_v1_chr15_-_59041988 BC126253 BC143935 NM_001110	-89836	-	AK000867 TSC_hg19_v1_chr15_-_59225776 AK055195 BC108656 AK291423 AK131242	93892	-	TSC_hg19_v1_chr15_-_59225851 BC140851 NM_001013843 NM_024755	93941	-	TSC_hg19_v1_chr15_+_59279864 BC060862 BX538130 NM_017610	147967	+	BC060514|FAM63B|54629|family with sequence similarity 63, member B##AK297291|FAM63B|54629|family with sequence similarity 63, member B##AK075319|FAM63B|54629|family with sequence similarity 63, member B##AB075509|FAM63B|54629|family with sequence similarity 63, member B##BC140811|FAM63B|54629|family with sequence similarity 63, member B##BC144616|FAM63B|54629|family with sequence similarity 63, member B##AL833610|FAM63B|54629|family with sequence similarity 63, member B##NM_001040450|FAM63B|54629|family with sequence similarity 63, member B##NM_001040453|FAM63B|54629|family with sequence similarity 63, member B##BC126253|ADAM10|102|ADAM metallopeptidase domain 10##BC143935|ADAM10|102|ADAM metallopeptidase domain 10##NM_001110|ADAM10|102|ADAM metallopeptidase domain 10##AK000867|SLTM|79811|SAFB-like, transcription modulator##AK055195|SLTM|79811|SAFB-like, transcription modulator##BC108656|SLTM|79811|SAFB-like, transcription modulator##AK291423|SLTM|79811|SAFB-like, transcription modulator##AK131242|SLTM|79811|SAFB-like, transcription modulator##BC140851|SLTM|79811|SAFB-like, transcription modulator##NM_001013843|SLTM|79811|SAFB-like, transcription modulator##NM_024755|SLTM|79811|SAFB-like, transcription modulator##BC060862|RNF111|54778|ring finger protein 111##BX538130|RNF111|54778|ring finger protein 111##NM_017610|RNF111|54778|ring finger protein 111	0.180705	
chr16	89575422	89575603	reg1017341.p2	7.592	+	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	-698	+	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	-18581	-	AK293862 NM_001242885	-187972	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	51553	+	TSC_hg19_v1_chr16_+_89627089 BC093063 AK026501 AK093246 AK130964 AK290893 AK294655 AK308545 BC066320 D28432 X64707 AK025405 AK127579 AK130963 AK297198 BC007345 BC004954 BC006179 BC063378 BC007805 BC013078 BC014167 BC027463 BC010994 BC000851 BC020804 NM_033251 BC007563	51595	+	TSC_hg19_v1_chr16_+_89642221 AJ133798 NM_014427 NM_153636 BC064577 BC035334 CU690070 AB463543	66695	+	NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13##BC093063|RPL13|6137|ribosomal protein L13##AK026501|RPL13|6137|ribosomal protein L13##AK130964|RPL13|6137|ribosomal protein L13##AK290893|RPL13|6137|ribosomal protein L13##AK294655|RPL13|6137|ribosomal protein L13##AK308545|RPL13|6137|ribosomal protein L13##BC066320|RPL13|6137|ribosomal protein L13##D28432|RPL13|6137|ribosomal protein L13##X64707|RPL13|6137|ribosomal protein L13##AK025405|RPL13|6137|ribosomal protein L13##AK127579|RPL13|6137|ribosomal protein L13##AK130963|RPL13|6137|ribosomal protein L13##AK297198|RPL13|6137|ribosomal protein L13##BC007345|RPL13|6137|ribosomal protein L13##BC004954|RPL13|6137|ribosomal protein L13##BC006179|RPL13|6137|ribosomal protein L13##BC063378|RPL13|6137|ribosomal protein L13##BC007805|RPL13|6137|ribosomal protein L13##BC013078|RPL13|6137|ribosomal protein L13##BC014167|RPL13|6137|ribosomal protein L13##BC027463|RPL13|6137|ribosomal protein L13##BC010994|RPL13|6137|ribosomal protein L13##BC000851|RPL13|6137|ribosomal protein L13##BC020804|RPL13|6137|ribosomal protein L13##NM_033251|RPL13|6137|ribosomal protein L13##BC007563|RPL13|6137|ribosomal protein L13##AJ133798|CPNE7|27132|copine VII##NM_014427|CPNE7|27132|copine VII##NM_153636|CPNE7|27132|copine VII##BC064577|CPNE7|27132|copine VII##BC035334|CPNE7|27132|copine VII	0.0	
chr2	171829886	171829990	reg1002317.p1	7.592	+	TSC_hg19_v1_chr2_+_171785781 AK298020 BC007770 BC001408 AK296698 AK027349 AB528359 DQ892715 DQ895965 CU675801	-44124	+	TSC_hg19_v1_chr2_+_171785776 AK315508 AK023201 AK225810 AK293640 AK023082	-44237	+	NM_001201428 AL117430 AK125761 NM_015530	-44947	+	AK301857 NM_001136555	93544	-	TSC_hg19_v1_chr2_-_172017240 DQ890904 DQ894057 BC032657 D50927 AK292508 AF162666 AB004885	187158	-	TSC_hg19_v1_chr2_-_172017431 AK091975 NM_012290	187561	-	AK298020|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC007770|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC001408|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK296698|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK027349|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ892715|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ895965|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK315508|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023201|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK225810|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK293640|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023082|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##NM_001201428|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AL117430|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK125761|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##NM_015530|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK301857|TLK1|9874|tousled-like kinase 1##NM_001136555|TLK1|9874|tousled-like kinase 1##DQ890904|TLK1|9874|tousled-like kinase 1##DQ894057|TLK1|9874|tousled-like kinase 1##BC032657|TLK1|9874|tousled-like kinase 1##D50927|TLK1|9874|tousled-like kinase 1##AK292508|TLK1|9874|tousled-like kinase 1##AF162666|TLK1|9874|tousled-like kinase 1##AB004885|TLK1|9874|tousled-like kinase 1##AK091975|TLK1|9874|tousled-like kinase 1##NM_012290|TLK1|9874|tousled-like kinase 1	0.0	
chr3	97377667	97377759	reg1018118.p2	7.591	+	AK302040 AK310249 BC031881 BC067287 AK302080 AL133666 NM_173655	-219242	+	NM_001080448 TSC_hg19_v1_chr3_+_96533435 AK092565 AX747601	-844283	+	AK122674 NM_001195643	-3595647	-	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	105887	+	TSC_hg19_v1_chr3_+_97540854 AK296966	163157	+	TSC_hg19_v1_chr3_-_97691261 NM_001042533 NM_032778 AK027299 DQ453796 AB083192 NM_153182	313564	-	AK302040|EPHA6|285220|EPH receptor A6##AK310249|EPHA6|285220|EPH receptor A6##BC031881|EPHA6|285220|EPH receptor A6##BC067287|EPHA6|285220|EPH receptor A6##AK302080|EPHA6|285220|EPH receptor A6##AL133666|EPHA6|285220|EPH receptor A6##NM_173655|EPHA6|285220|EPH receptor A6##NM_001080448|EPHA6|285220|EPH receptor A6##AK092565|EPHA6|285220|EPH receptor A6##AK122674|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1##BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6##AK296966|CRYBG3|131544|beta-gamma crystallin domain containing 3##NM_001042533|MINA|84864|MYC induced nuclear antigen##NM_032778|MINA|84864|MYC induced nuclear antigen##AK027299|MINA|84864|MYC induced nuclear antigen##DQ453796|MINA|84864|MYC induced nuclear antigen##AB083192|MINA|84864|MYC induced nuclear antigen##NM_153182|MINA|84864|MYC induced nuclear antigen	0.995243	CTCF.p2:3:0.995
chr12	71123914	71124003	reg1017420.p2	7.590	+	AB587339 TSC_hg19_v1_chr12_-_71031179 AK128562 BC051329 BX647238 CR749546 BX648245 AK126121 NM_001109754	-92762	-	BC101679 BC113463 BC143356 BC143360 NM_001206971 NM_001206972 NM_002837 X54131	-120336	-	TSC_hg19_v1_chr12_+_70861858 BC031864	-262090	+	BC119777 BC122866 BC110900 TSC_hg19_v1_chr12_-_71148231	24191	-	X82635 TSC_hg19_v1_chr12_-_71148363 U77917 BC072386	24392	-	TSC_hg19_v1_chr12_-_71148389 BC092469 NM_130846 U77916 BX571751 AK304457 AK304672 NM_001207016	24502	-	AK128562|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC051329|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX647238|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##CR749546|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX648245|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##AK126121|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001109754|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206971|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206972|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##NM_001207016|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	0.991891	CTCF.p2:13:0.992
chr3	10364138	10364250	reg1017585.p2	7.590	+	TSC_hg19_v1_chr3_-_10362861 NM_183352	-1341	-	AK294662 TSC_hg19_v1_chr3_-_10362797 BC091506 AK301999	-1396	-	AF052155 NM_001136232 TSC_hg19_v1_chr3_-_10362765 L09260 BC002634 AK223019 EF036494	-1447	-	TSC_hg19_v1_chr3_-_10547221 M97260	183039	-	AK308898 NM_001001331 NM_001683 TSC_hg19_v1_chr3_-_10547271	183075	-	AB210008 TSC_hg19_v1_chr3_-_10547352	183152	-	NM_183352|SEC13|6396|SEC13 homolog (S. cerevisiae)##AK294662|SEC13|6396|SEC13 homolog (S. cerevisiae)##BC091506|SEC13|6396|SEC13 homolog (S. cerevisiae)##AK301999|SEC13|6396|SEC13 homolog (S. cerevisiae)##AF052155|SEC13|6396|SEC13 homolog (S. cerevisiae)##NM_001136232|SEC13|6396|SEC13 homolog (S. cerevisiae)##L09260|SEC13|6396|SEC13 homolog (S. cerevisiae)##BC002634|SEC13|6396|SEC13 homolog (S. cerevisiae)##AK223019|SEC13|6396|SEC13 homolog (S. cerevisiae)##EF036494|SEC13|6396|SEC13 homolog (S. cerevisiae)##M97260|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2	0.997138	CTCF.p2:-1:0.997
chrY	21154691	21154811	reg1016211.p1	7.590	+	AB464564 EU446549 HQ258416 BC117380 BC117382 BC055414 AF332226 AF332227 AJ566404 NM_001001877 NM_152584 BC036567 NM_033108 AK058182 NM_153716	-219190	-	AK058182 NM_153716 BC036567 NM_033108 AF332226 AF332227 AJ566404 NM_001001877 NM_152584 BC055414 BC117380 BC117382 AB464564 EU446549 HQ258416	-446137	+	AF000997 NM_001002906 NM_004677 BC132883 BC132885 BC132901 BC132903	-857353	+	TSC_hg19_v1_chrY_-_21154679 S75311 BT007404 DQ890636 DQ893812 L33930 M58664 X69397 BC064619 AK026603 NM_013230	18	-	TSC_hg19_v1_chrY_-_21239250 AF332243	84524	-	TSC_hg19_v1_chrY_+_21729262 AK127387 AF332224	574496	+	EU446549|HSFY1|86614|heat shock transcription factor, Y-linked 1##HQ258416|HSFY2|159119|heat shock transcription factor, Y linked 2##BC117380|HSFY1|86614|heat shock transcription factor, Y-linked 1##BC117382|HSFY1|86614|heat shock transcription factor, Y-linked 1##BC055414|HSFY1|86614|heat shock transcription factor, Y-linked 1##AF332226|HSFY1|86614|heat shock transcription factor, Y-linked 1##AF332227|HSFY1|86614|heat shock transcription factor, Y-linked 1##AJ566404|HSFY1|86614|heat shock transcription factor, Y-linked 1##NM_001001877|HSFY2|159119|heat shock transcription factor, Y linked 2##NM_152584|HSFY1|86614|heat shock transcription factor, Y-linked 1##BC036567|HSFY1|86614|heat shock transcription factor, Y-linked 1##NM_033108|HSFY1|86614|heat shock transcription factor, Y-linked 1##AK058182|HSFY2|159119|heat shock transcription factor, Y linked 2##NM_153716|HSFY2|159119|heat shock transcription factor, Y linked 2##AK058182|HSFY2|159119|heat shock transcription factor, Y linked 2##NM_153716|HSFY2|159119|heat shock transcription factor, Y linked 2##BC036567|HSFY1|86614|heat shock transcription factor, Y-linked 1##NM_033108|HSFY1|86614|heat shock transcription factor, Y-linked 1##AF332226|HSFY1|86614|heat shock transcription factor, Y-linked 1##AF332227|HSFY1|86614|heat shock transcription factor, Y-linked 1##AJ566404|HSFY1|86614|heat shock transcription factor, Y-linked 1##NM_001001877|HSFY2|159119|heat shock transcription factor, Y linked 2##NM_152584|HSFY1|86614|heat shock transcription factor, Y-linked 1##BC055414|HSFY1|86614|heat shock transcription factor, Y-linked 1##BC117380|HSFY1|86614|heat shock transcription factor, Y-linked 1##BC117382|HSFY1|86614|heat shock transcription factor, Y-linked 1##EU446549|HSFY1|86614|heat shock transcription factor, Y-linked 1##HQ258416|HSFY2|159119|heat shock transcription factor, Y linked 2##AF000997|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked##NM_001002906|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2##NM_004677|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked##BC132883|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked##BC132885|XKRY|9082|XK, Kell blood group complex subunit-related, Y-linked##BC132901|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2##BC132903|XKRY2|353515|XK, Kell blood group complex subunit-related, Y-linked 2##S75311|CD24P4|938|CD24 molecule pseudogene 4##BT007404|CD24|100133941|CD24 molecule##DQ890636|CD24|100133941|CD24 molecule##DQ893812|CD24|100133941|CD24 molecule##L33930|CD24|100133941|CD24 molecule##M58664|CD24|100133941|CD24 molecule##X69397|CD24|100133941|CD24 molecule##BC064619|CD24|100133941|CD24 molecule##AK026603|CD24|100133941|CD24 molecule##NM_013230|CD24|100133941|CD24 molecule##AF332243|TTTY14|83869|testis-specific transcript, Y-linked 14 (non-protein coding)##AK127387|TXLNG2P|246126|taxilin gamma 2, pseudogene##AF332224|TXLNG2P|246126|taxilin gamma 2, pseudogene	0.0	
chr15	66544790	66544941	reg1017531.p1	7.589	+	TSC_hg19_v1_chr15_-_66321664 AK054827	-223172	-	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	-383018	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-460272	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	1212	-	NM_133375 AK295392 BC022089	40780	+	TSC_hg19_v1_chr15_+_66585931 NM_001143688 AK095407	41034	+	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	0.104702	
chr6	160112401	160112531	reg1018830.p2	7.589	+	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	-522036	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-646365	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-691245	-	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	1784	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	1896	-	TSC_hg19_v1_chr6_+_160148149 AK290854 AF374416 NM_004906 NM_152858 BC000383 BC004432 BC069192	35706	+	DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial##AK290854|WTAP|9589|Wilms tumor 1 associated protein##AF374416|WTAP|9589|Wilms tumor 1 associated protein##NM_004906|WTAP|9589|Wilms tumor 1 associated protein##NM_152858|WTAP|9589|Wilms tumor 1 associated protein##BC000383|WTAP|9589|Wilms tumor 1 associated protein##BC004432|WTAP|9589|Wilms tumor 1 associated protein##BC069192|WTAP|9589|Wilms tumor 1 associated protein	0.170672	
chrX	130110010	130110160	reg1018212.p1	7.589	+	TSC_hg19_v1_chrX_-_130037207 AK000353 NM_006375 NM_182314	-72879	-	TSC_hg19_v1_chrX_-_130037184 BC108713 AL133207 AK289812 AK289837	-72908	-	TSC_hg19_v1_chrX_+_129535955 BC003676 NM_016024 AK292855 BC105582 BC012345 AL050405 BC033750 BC063517 BC010036 BC040433 BC050707	-574132	+	AK128203 NM_144967 AK296748 AX721074	82187	+	BC028312 NM_001170963	312949	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	313177	-	AK000353|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_006375|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_182314|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##BC108713|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AL133207|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289812|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289837|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##BC003676|RBMX2|51634|RNA binding motif protein, X-linked 2##NM_016024|RBMX2|51634|RNA binding motif protein, X-linked 2##AK292855|RBMX2|51634|RNA binding motif protein, X-linked 2##BC105582|RBMX2|51634|RNA binding motif protein, X-linked 2##BC012345|RBMX2|51634|RNA binding motif protein, X-linked 2##AL050405|RBMX2|51634|RNA binding motif protein, X-linked 2##BC033750|RBMX2|51634|RNA binding motif protein, X-linked 2##BC063517|RBMX2|51634|RNA binding motif protein, X-linked 2##BC010036|RBMX2|51634|RNA binding motif protein, X-linked 2##BC040433|RBMX2|51634|RNA binding motif protein, X-linked 2##BC050707|RBMX2|51634|RNA binding motif protein, X-linked 2##AK128203|ARHGAP36|158763|Rho GTPase activating protein 36##NM_144967|ARHGAP36|158763|Rho GTPase activating protein 36##AK296748|ARHGAP36|158763|Rho GTPase activating protein 36##BC028312|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1	0.0	
chr1	59248104	59248231	reg1018124.p2	7.588	+	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-82415	-	TSC_hg19_v1_chr1_-_59147727 BC017579	-100421	-	NM_002353	-205002	-	TSC_hg19_v1_chr1_-_59248287 BC009874	198	-	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	1568	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	514445	+	BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_002353|TACSTD2|4070|tumor-associated calcium signal transducer 2##BC009874|JUN|3725|jun proto-oncogene##BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing	0.0	
chr21	45664128	45664267	reg1016390.p2	7.588	+	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	-3340	-	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	-3431	-	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-110636	+	AF194032 NM_013369 NM_175867	17901	-	BC142608 AK309572 AB006682 NM_000383 Z97990	41547	+	AB006683 AB006685 BC137268 BC137270 NM_000658	46013	+	AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##BC142608|AIRE|326|autoimmune regulator##AK309572|AIRE|326|autoimmune regulator##AB006682|AIRE|326|autoimmune regulator##NM_000383|AIRE|326|autoimmune regulator##Z97990|AIRE|326|autoimmune regulator##AB006683|AIRE|326|autoimmune regulator##AB006685|AIRE|326|autoimmune regulator##BC137268|AIRE|326|autoimmune regulator##BC137270|AIRE|326|autoimmune regulator##NM_000658|AIRE|326|autoimmune regulator	0.0	
chr9	76994761	76994864	reg1017804.p1	7.588	+	TSC_hg19_v1_chr9_+_75766797 BC001275	-1228009	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	-1228034	+	NM_000689	-1426580	-	NM_006914 BC051830 Y08639	117462	+	AY333284 NM_001177311	507450	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	507922	-	BC001275|ANXA1|301|annexin A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B##AY333284|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177311|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	0.986893	CTCF.p2:9:0.987
chr12	125166000	125166120	reg1016305.p1	7.587	+	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	-113985	-	TSC_hg19_v1_chr12_-_125002875 BC033087	-163201	-	AK126577 NM_181709	-392351	+	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	182245	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	182317	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	182413	-	AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr2	16400062	16400176	reg1020236.p1	7.587	+	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-317952	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-318124	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	-318346	-	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	447025	-	DQ860102 NM_001099218	1299586	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	1321768	+	BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1	0.90287	CTCF.p2:4:0.903
chr15	79048684	79048796	reg1019320.p1	7.586	+	TSC_hg19_v1_chr15_-_78933573 U62439 Y08416 BC096080 BC096081 BC096082 BC096083 NM_000750 U48861	-115167	-	TSC_hg19_v1_chr15_-_78913532 BC098443 BC006114 NM_000743 NM_001166694	-135168	-	AF385584 Y08418 BT006646 BT006897 CU674246 CU675253 M86383 M37981 TSC_hg19_v1_chr15_-_78913298 BC000513 BC001642 BC002996 U62432	-135507	-	TSC_hg19_v1_chr15_+_79102818 AK095823	54087	+	AY327122 AF140675 TSC_hg19_v1_chr15_-_79103698 BC061631 NM_014272 AK299844	55010	-	TSC_hg19_v1_chr15_+_79165157 NM_006791 NM_206839	116434	+	U62439|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##Y08416|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096080|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096081|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096082|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096083|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##NM_000750|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##U48861|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC098443|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC006114|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_000743|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_001166694|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AF385584|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##Y08418|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006646|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006897|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##M37981|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC000513|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC001642|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC002996|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##U62432|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AK095823|MORF4L1|10933|mortality factor 4 like 1##AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_006791|MORF4L1|10933|mortality factor 4 like 1##NM_206839|MORF4L1|10933|mortality factor 4 like 1	0.937043	CTCF.p2:4:0.937
chr2	74223044	74223172	reg1020931.p1	7.586	+	TSC_hg19_v1_chr2_+_74154019 X97386	-69062	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-69108	+	TSC_hg19_v1_chr2_+_74153968 NM_080916 NM_080918	-69158	+	NM_144993	50341	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	151910	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	152112	+	X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##NM_080916|DGUOK|1716|deoxyguanosine kinase##NM_080918|DGUOK|1716|deoxyguanosine kinase##NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.143664	
chr5	171334847	171334979	reg1020018.p1	7.586	+	BC006245 TSC_hg19_v1_chr5_+_170847089 AB007422 AB528345 AF211188 AM393798 BT019570 BT019571 DQ892736 DQ895983	-487782	+	AY358811 AF075292 NM_003862	-488251	+	AB042278 AB451236 AB451361 AB463949 BT007011 CU676967 CU677717 CU680364 CU692436 DQ892032 DQ895223 EF429251 X16934 TSC_hg19_v1_chr5_+_170815031	-519922	+	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	98615	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	98731	-	BC026213 NM_012300 NM_033644 NM_033645	98963	-	BC006245|FGF18|8817|fibroblast growth factor 18##AB007422|FGF18|8817|fibroblast growth factor 18##AF211188|FGF18|8817|fibroblast growth factor 18##AM393798|FGF18|8817|fibroblast growth factor 18##BT019570|FGF18|8817|fibroblast growth factor 18##BT019571|FGF18|8817|fibroblast growth factor 18##DQ892736|FGF18|8817|fibroblast growth factor 18##DQ895983|FGF18|8817|fibroblast growth factor 18##AY358811|FGF18|8817|fibroblast growth factor 18##AF075292|FGF18|8817|fibroblast growth factor 18##NM_003862|FGF18|8817|fibroblast growth factor 18##AB042278|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451236|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451361|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BT007011|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ892032|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ895223|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##EF429251|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##X16934|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11	0.999247	CTCF.p2:9:0.999
chr9	141021198	141021379	reg1012899.p2	7.586	+	TSC_hg19_v1_chr9_+_140918045 AB209467	-103214	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	-249054	+	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	-382759	+	TSC_hg19_v1_chr9_+_141044539 AK308459	23263	+	NM_001145249	85348	+	None	None	None	AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK308459|TUBBP5|643224|tubulin, beta pseudogene 5##NM_001145249|FAM157B|100132403|family with sequence similarity 157, member B	2.997302	CTCF.p2:3:0.999	CTCF.p2:-56:0.999	CTCF.p2:64:0.999
chrX	52088671	52088802	reg1021717.p1	7.586	+	NM_001242362 NM_030801 NM_177535 NM_177537 AB058762 BC001207 AK098830 AK289458 AK308365 AB040527 AB040528 AB040529 NM_001098800 AL136582 BC081566 BC063838	-160759	+	BC063838 BC081566 AL136582 AB040527 AB040528 AB040529 NM_001098800 AK098830 AK289458 AK308365 BC001207 AB058762 NM_001242362 NM_030801 NM_177535 NM_177537	-276428	-	TSC_hg19_v1_chrX_+_51636723 NM_001005333 NM_006986 AF258554 AK298574 AK308706 BC014070 AK314053 AK074092 AF217963 AF300328	-452033	+	NM_130777 BC066311 BC009232 AJ318880	23391	+	AB590383 DQ893147 DQ896442 NM_001079538	24421	+	NM_001097592 NM_001097594 NM_001097597 NM_001097604 NM_020411 AF251237 NM_001097593 NM_001097596 NM_001097598 NM_001097605 NM_133430 AJ290447 AJ318879 AJ318878	150177	+	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B##NM_030801|MAGED4B|81557|melanoma antigen family D, 4B##NM_177535|MAGED4B|81557|melanoma antigen family D, 4B##NM_177537|MAGED4B|81557|melanoma antigen family D, 4B##AB058762|MAGED4B|81557|melanoma antigen family D, 4B##BC001207|MAGED4B|81557|melanoma antigen family D, 4B##AK098830|MAGED4B|81557|melanoma antigen family D, 4B##AK289458|MAGED4B|81557|melanoma antigen family D, 4B##AK308365|MAGED4B|81557|melanoma antigen family D, 4B##AB040527|MAGED4B|81557|melanoma antigen family D, 4B##AB040528|MAGED4B|81557|melanoma antigen family D, 4B##AB040529|MAGED4B|81557|melanoma antigen family D, 4B##NM_001098800|MAGED4|728239|melanoma antigen family D, 4##AL136582|MAGED4B|81557|melanoma antigen family D, 4B##BC081566|MAGED4B|81557|melanoma antigen family D, 4B##BC063838|MAGED4B|81557|melanoma antigen family D, 4B##BC063838|MAGED4B|81557|melanoma antigen family D, 4B##BC081566|MAGED4B|81557|melanoma antigen family D, 4B##AL136582|MAGED4B|81557|melanoma antigen family D, 4B##AB040527|MAGED4B|81557|melanoma antigen family D, 4B##AB040528|MAGED4B|81557|melanoma antigen family D, 4B##AB040529|MAGED4B|81557|melanoma antigen family D, 4B##NM_001098800|MAGED4|728239|melanoma antigen family D, 4##AK098830|MAGED4B|81557|melanoma antigen family D, 4B##AK289458|MAGED4B|81557|melanoma antigen family D, 4B##AK308365|MAGED4B|81557|melanoma antigen family D, 4B##BC001207|MAGED4B|81557|melanoma antigen family D, 4B##AB058762|MAGED4B|81557|melanoma antigen family D, 4B##NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B##NM_030801|MAGED4B|81557|melanoma antigen family D, 4B##NM_177535|MAGED4B|81557|melanoma antigen family D, 4B##NM_177537|MAGED4B|81557|melanoma antigen family D, 4B##NM_001005333|MAGED1|9500|melanoma antigen family D, 1##NM_006986|MAGED1|9500|melanoma antigen family D, 1##AF258554|MAGED1|9500|melanoma antigen family D, 1##AK298574|MAGED1|9500|melanoma antigen family D, 1##AK308706|MAGED1|9500|melanoma antigen family D, 1##BC014070|MAGED1|9500|melanoma antigen family D, 1##AK314053|MAGED1|9500|melanoma antigen family D, 1##AK074092|MAGED1|9500|melanoma antigen family D, 1##AF217963|MAGED1|9500|melanoma antigen family D, 1##AF300328|MAGED1|9500|melanoma antigen family D, 1##NM_130777|XAGE2|9502|X antigen family, member 2##BC066311|XAGE2|9502|X antigen family, member 2##BC009232|XAGE2|9502|X antigen family, member 2##AJ318880|XAGE2|9502|X antigen family, member 2##DQ893147|XAGE2|9502|X antigen family, member 2##DQ896442|XAGE2|9502|X antigen family, member 2##NM_001079538|XAGE2B|728242|X antigen family, member 2B##NM_001097592|XAGE1A|653219|X antigen family, member 1A##NM_001097594|XAGE1B|653220|X antigen family, member 1B##NM_001097597|XAGE1C|653048|X antigen family, member 1C##NM_001097604|XAGE1E|653067|X antigen family, member 1E##NM_020411|XAGE1D|9503|X antigen family, member 1D##AF251237|XAGE1D|9503|X antigen family, member 1D##NM_001097593|XAGE1A|653219|X antigen family, member 1A##NM_001097596|XAGE1B|653220|X antigen family, member 1B##NM_001097598|XAGE1C|653048|X antigen family, member 1C##NM_001097605|XAGE1E|653067|X antigen family, member 1E##NM_133430|XAGE1D|9503|X antigen family, member 1D##AJ290447|XAGE1D|9503|X antigen family, member 1D##AJ318879|XAGE1D|9503|X antigen family, member 1D##AJ318878|XAGE1D|9503|X antigen family, member 1D	0.972663	CTCF.p2:11:0.973
chr17	63133326	63133434	reg1014590.p1	7.585	+	TSC_hg19_v1_chr17_-_63052903 AK301699 NM_006572	-80479	-	BC011925 TSC_hg19_v1_chr17_-_63052851	-80547	-	TSC_hg19_v1_chr17_-_63052756 L22075 BC036756	-80620	-	NM_001081955 NM_001165933 NM_003835 TSC_hg19_v1_chr17_+_63133479	90	+	TSC_hg19_v1_chr17_+_63133501 AK309061 AK290535 BC022504 AK301719 AF071476 AK289876 AF493933 AY585191	199	+	BC006295 TSC_hg19_v1_chr17_-_63556453	423095	-	AK301699|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_006572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##L22075|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC036756|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_001081955|RGS9|8787|regulator of G-protein signaling 9##NM_001165933|RGS9|8787|regulator of G-protein signaling 9##NM_003835|RGS9|8787|regulator of G-protein signaling 9##AK309061|RGS9|8787|regulator of G-protein signaling 9##AK290535|RGS9|8787|regulator of G-protein signaling 9##BC022504|RGS9|8787|regulator of G-protein signaling 9##AK301719|RGS9|8787|regulator of G-protein signaling 9##AF071476|RGS9|8787|regulator of G-protein signaling 9##AK289876|RGS9|8787|regulator of G-protein signaling 9##AF493933|RGS9|8787|regulator of G-protein signaling 9##AY585191|RGS9|8787|regulator of G-protein signaling 9##BC006295|AXIN2|8313|axin 2	0.998302	CTCF.p2:18:0.998
chr2	122288606	122288781	reg1018077.p2	7.585	+	AK297259 TSC_hg19_v1_chr2_-_122247924	-40774	-	TSC_hg19_v1_chr2_-_122159142 CR749627	-129538	-	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	-245920	-	TSC_hg19_v1_chr2_-_122407024 BC112940 AK091140 AX746802 BC132723 BC144107 AK299331 AJ288057 NM_001142273 NM_001142274 NM_001207051 NM_015282	118329	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	118952	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	205772	-	AK297259|CLASP1|23332|cytoplasmic linker associated protein 1##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##BC112940|CLASP1|23332|cytoplasmic linker associated protein 1##AK091140|CLASP1|23332|cytoplasmic linker associated protein 1##BC132723|CLASP1|23332|cytoplasmic linker associated protein 1##BC144107|CLASP1|23332|cytoplasmic linker associated protein 1##AK299331|CLASP1|23332|cytoplasmic linker associated protein 1##AJ288057|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142273|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142274|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001207051|CLASP1|23332|cytoplasmic linker associated protein 1##NM_015282|CLASP1|23332|cytoplasmic linker associated protein 1##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein	0.720577	CTCF.p2:-28:0.721
chr4	73192571	73192669	reg1016589.p2	7.585	+	AK290937 NM_001144756 NM_053036 AF236083	-287750	+	AF119815 NM_004885 AK308069 AJ311393	-295051	+	AK223458 NM_001204306	-521384	-	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	241871	-	BC101684 BC143642 TSC_hg19_v1_chr4_-_73935431 AK096310 AY957564 AY957565 BC071812 NM_173827	742823	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	896159	-	AK290937|NPFFR2|10886|neuropeptide FF receptor 2##NM_001144756|NPFFR2|10886|neuropeptide FF receptor 2##NM_053036|NPFFR2|10886|neuropeptide FF receptor 2##AF236083|NPFFR2|10886|neuropeptide FF receptor 2##AF119815|NPFFR2|10886|neuropeptide FF receptor 2##NM_004885|NPFFR2|10886|neuropeptide FF receptor 2##AK308069|NPFFR2|10886|neuropeptide FF receptor 2##AJ311393|NPFFR2|10886|neuropeptide FF receptor 2##AK223458|GC|2638|group-specific component (vitamin D binding protein)##NM_001204306|GC|2638|group-specific component (vitamin D binding protein)##AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC101684|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC143642|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK096310|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957564|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957565|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC071812|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_173827|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17	0.999667	CTCF.p2:-7:1.000
chr10	35668206	35668348	reg1017623.p1	7.584	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	-42483	+	TSC_hg19_v1_chr10_+_35625400 AK314666	-42821	+	AF429969 AK057280 NM_181698	-132325	+	AK074504 NM_153368	226060	+	AB587328 AB043703 NM_031866	262082	-	AF269087 NM_052997	1746507	+	AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AK314666|CCNY|219771|cyclin Y##AF429969|CCNY|219771|cyclin Y##AK057280|CCNY|219771|cyclin Y##NM_181698|CCNY|219771|cyclin Y##AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa##AB043703|FZD8|8325|frizzled family receptor 8##NM_031866|FZD8|8325|frizzled family receptor 8##AF269087|ANKRD30A|91074|ankyrin repeat domain 30A##NM_052997|ANKRD30A|91074|ankyrin repeat domain 30A	0.780184	CTCF.p2:23:0.780
chr1	175345439	175345559	reg1019468.p1	7.584	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-183469	-	AK127044 NM_022093	-308506	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-352928	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	367211	-	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	830666	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	830819	-	D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2	0.345731	CTCF.p2:-2:0.346
chr6	134237821	134237926	reg1017406.p1	7.584	+	TSC_hg19_v1_chr6_+_134210277 AF035718 AF047419 BC025697	-27603	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	-27619	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	-675341	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	35491	+	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	36472	+	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	135830	-	AF035718|TCF21|6943|transcription factor 21##AF047419|TCF21|6943|transcription factor 21##BC025697|TCF21|6943|transcription factor 21##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21##BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1##NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	0.999203	CTCF.p2:11:0.999
chr17	37704284	37704400	reg1017029.p2	7.583	+	TSC_hg19_v1_chr17_+_37618267 AF227198 BC140854 AB462974	-86056	+	TSC_hg19_v1_chr17_+_37617760 NM_015083 NM_016507 AK302645	-86590	+	CU687400 BC131783 AF055994 BC006517 Y13467 BC060758 TSC_hg19_v1_chr17_-_37607519 AK299789 AK314185 NM_004774	-96921	-	TSC_hg19_v1_chr17_-_37764168 BC022481 NM_006160	59831	-	NM_032192 AF464196 TSC_hg19_v1_chr17_+_37783188	78842	+	TSC_hg19_v1_chr17_+_37783204 AK123112 AK127542 AK129537 AF435972	78867	+	AF227198|CDK12|51755|cyclin-dependent kinase 12##BC140854|CDK12|51755|cyclin-dependent kinase 12##NM_015083|CDK12|51755|cyclin-dependent kinase 12##NM_016507|CDK12|51755|cyclin-dependent kinase 12##AK302645|CDK12|51755|cyclin-dependent kinase 12##BC131783|MED1|5469|mediator complex subunit 1##AF055994|MED1|5469|mediator complex subunit 1##BC006517|MED1|5469|mediator complex subunit 1##Y13467|MED1|5469|mediator complex subunit 1##BC060758|MED1|5469|mediator complex subunit 1##AK299789|MED1|5469|mediator complex subunit 1##AK314185|MED1|5469|mediator complex subunit 1##NM_004774|MED1|5469|mediator complex subunit 1##BC022481|NEUROD2|4761|neurogenic differentiation 2##NM_006160|NEUROD2|4761|neurogenic differentiation 2##NM_032192|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF464196|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK123112|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK127542|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK129537|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435972|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	0.554495	CTCF.p2:8:0.554
chr19	30088266	30088391	reg1013604.p1	7.583	+	NM_001146339	-70838	+	TSC_hg19_v1_chr19_-_29704107 NM_006003	-384207	-	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	-384268	-	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	8861	+	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	68021	+	TSC_hg19_v1_chr19_+_30156375 AK225814	68093	+	NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1	0.064169	
chrX	89126777	89126899	reg1018832.p1	7.583	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	-1124598	+	NM_019117 NM_057162 AK056457 AB051474 BC161675 AL832514 AF284765 AF284766 BC140839 BC140840 BC142652 BC146677 AB385497	-2354033	+	AK055953 AK298787 NM_001139515	-3608868	+	BC117398 BC117400 NM_138960 BC101144 BC101145 AF497480 BC029920 AB464725 HQ258115	50173	+	NM_080832	1562758	+	NM_032967 AJ276804 AJ564847 AK299638 AK299813 AK316263 TSC_hg19_v1_chrX_+_91034373	1907479	+	NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1##NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)##NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)##AK056457|KLHL4|56062|kelch-like 4 (Drosophila)##AB051474|KLHL4|56062|kelch-like 4 (Drosophila)##BC161675|KLHL4|56062|kelch-like 4 (Drosophila)##AL832514|KLHL4|56062|kelch-like 4 (Drosophila)##AF284765|KLHL4|56062|kelch-like 4 (Drosophila)##AF284766|KLHL4|56062|kelch-like 4 (Drosophila)##BC140839|KLHL4|56062|kelch-like 4 (Drosophila)##BC140840|KLHL4|56062|kelch-like 4 (Drosophila)##BC142652|KLHL4|56062|kelch-like 4 (Drosophila)##BC146677|KLHL4|56062|kelch-like 4 (Drosophila)##AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)##BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_080832|PABPC5|140886|poly(A) binding protein, cytoplasmic 5##NM_032967|PCDH11X|27328|protocadherin 11 X-linked##AJ276804|PCDH11X|27328|protocadherin 11 X-linked##AJ564847|PCDH11X|27328|protocadherin 11 X-linked##AK299813|PCDH11X|27328|protocadherin 11 X-linked##AK316263|PCDH11X|27328|protocadherin 11 X-linked	0.204815	CTCF.p2:-8:0.205
chr1	147172186	147172295	reg1017536.p2	7.582	+	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	-29746	-	NM_004326 Y13620 AK298105 TSC_hg19_v1_chr1_+_147013319	-158989	+	TSC_hg19_v1_chr1_+_146714335 AK298424 AK297135 BC077717 AK293157 BC001171 AF054177 BC043501 BC053354 BC005038	-457876	+	BC013313 NM_181703	60458	-	NM_005266	73243	-	NM_005267	202705	+	AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_004326|BCL9|607|B-cell CLL/lymphoma 9##Y13620|BCL9|607|B-cell CLL/lymphoma 9##AK298424|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK297135|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC077717|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK293157|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC001171|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF054177|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC043501|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC053354|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC005038|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_005266|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa	0.804793	CTCF.p2:1:0.706
chr11	120800458	120800587	reg1018649.p2	7.581	+	AB384776 NM_014619 S67803	-269495	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-418057	+	BC063117 NM_001198665 NM_015313	-592905	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	94288	+	NM_005422	172852	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	362883	+	NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.997147	CTCF.p2:5:0.997
chr11	93654999	93655107	reg1017254.p1	7.581	+	NM_001144871	-71386	-	AF117657 TSC_hg19_v1_chr11_+_93517488 AK023209 CU676822 AB463860	-137472	+	AF105421 TSC_hg19_v1_chr11_+_93517475	-137580	+	NM_001098672	99324	+	TSC_hg19_v1_chr11_+_93862126 BC016931 NM_015368 AF398509 AK313074	207042	+	AK074897 TSC_hg19_v1_chr11_+_93862143 AF093239	207098	+	NM_001144871|VSTM5|387804|V-set and transmembrane domain containing 5##AF117657|MED17|9440|mediator complex subunit 17##AK023209|MED17|9440|mediator complex subunit 17##AF105421|MED17|9440|mediator complex subunit 17##NM_001098672|HEPHL1|341208|hephaestin-like 1##BC016931|PANX1|24145|pannexin 1##NM_015368|PANX1|24145|pannexin 1##AF398509|PANX1|24145|pannexin 1##AK313074|PANX1|24145|pannexin 1##AK074897|PANX1|24145|pannexin 1##AF093239|PANX1|24145|pannexin 1	0.995679	CTCF.p2:-2:0.996
chr1	48963902	48963996	reg1018175.p1	7.581	+	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	-26104	-	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	-26271	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	-275557	+	BC011804 AK021650 CU675869 NM_024603 BC007932	278548	-	TSC_hg19_v1_chr1_-_50489560 BC035739 AK094826 AK294394	1525598	-	TSC_hg19_v1_chr1_-_50489627 AK294633 AK296221 NM_032785	1525698	-	AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC011804|BEND5|79656|BEN domain containing 5##AK021650|BEND5|79656|BEN domain containing 5##NM_024603|BEND5|79656|BEN domain containing 5##BC007932|BEND5|79656|BEN domain containing 5##BC035739|AGBL4|84871|ATP/GTP binding protein-like 4##AK094826|AGBL4|84871|ATP/GTP binding protein-like 4##AK294394|AGBL4|84871|ATP/GTP binding protein-like 4##AK294633|AGBL4|84871|ATP/GTP binding protein-like 4##AK296221|AGBL4|84871|ATP/GTP binding protein-like 4##NM_032785|AGBL4|84871|ATP/GTP binding protein-like 4	0.883627	CTCF.p2:0:0.874
chr15	82339561	82339687	reg1019768.p1	7.581	+	AB095929 BC111545 BC036211 TSC_hg19_v1_chr15_-_82338485	-1148	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	-1258	-	AK094145 TSC_hg19_v1_chr15_-_82336883	-2741	-	BC014628 TSC_hg19_v1_chr15_-_82555043 AK300348 AK056656 BX538332	215407	-	TSC_hg19_v1_chr15_-_82555076 NM_001040610 NM_024580	215465	-	TSC_hg19_v1_chr15_+_82555158 AL833762 NM_001008226 BC144647 AK304339	215529	+	AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)##BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)##BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##BC014628|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK300348|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK056656|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BX538332|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_001040610|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_024580|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AL833762|FAM154B|283726|family with sequence similarity 154, member B##NM_001008226|FAM154B|283726|family with sequence similarity 154, member B##AK304339|FAM154B|283726|family with sequence similarity 154, member B	0.145014	
chr18	67740032	67740141	reg1014960.p1	7.581	+	GU935335 GU935336 U56102 NM_006566	-115891	-	AK313199 TSC_hg19_v1_chr18_-_67615110	-124987	-	TSC_hg19_v1_chr18_+_67068214 NM_152721 AY599248 BC096744	-671856	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	132852	-	NM_004232 TSC_hg19_v1_chr18_+_67956194	216081	+	TSC_hg19_v1_chr18_+_67956280 BC020082	216175	+	GU935335|CD226|10666|CD226 molecule##GU935336|CD226|10666|CD226 molecule##U56102|CD226|10666|CD226 molecule##NM_006566|CD226|10666|CD226 molecule##AK313199|CD226|10666|CD226 molecule##NM_152721|DOK6|220164|docking protein 6##AY599248|DOK6|220164|docking protein 6##BC096744|DOK6|220164|docking protein 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC020082|SOCS6|9306|suppressor of cytokine signaling 6	0.03181	
chr2	152437401	152437534	reg1021035.p1	7.581	+	AY727912 NM_001177665 TSC_hg19_v1_chr2_+_152266674	-170829	+	TSC_hg19_v1_chr2_+_152266419 AY727910 AY727913 NM_001177663 NM_018151 AY727911 NM_001177664 AK299572 AK299291 BX648324 AY585745 CR933663	-171037	+	NM_007115 M31165 BC030205 AB590644 AJ419936 AJ421518 CU688838 AF086484	-223288	+	TSC_hg19_v1_chr2_-_152590990 AK096903 AK307607 BC029384 BC012533 BC056251 BC105590 NM_001164507 NM_001164508 NM_004543	153524	-	AB528315 AF493891 BT009829 DQ891193 DQ894376 TSC_hg19_v1_chr2_-_152684707 AF100740	247254	-	TSC_hg19_v1_chr2_-_152684901 AK292714 BC001254	247436	-	AY727912|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177665|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727910|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727913|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_018151|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727911|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177664|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299572|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299291|RIF1|55183|RAP1 interacting factor homolog (yeast)##BX648324|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY585745|RIF1|55183|RAP1 interacting factor homolog (yeast)##CR933663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_007115|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##M31165|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##BC030205|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AJ419936|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AJ421518|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AF086484|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AK096903|NEB|4703|nebulin##AK307607|NEB|4703|nebulin##BC029384|NEB|4703|nebulin##BC012533|NEB|4703|nebulin##BC056251|NEB|4703|nebulin##BC105590|NEB|4703|nebulin##NM_001164507|NEB|4703|nebulin##NM_001164508|NEB|4703|nebulin##NM_004543|NEB|4703|nebulin##AF493891|ARL5A|26225|ADP-ribosylation factor-like 5A##BT009829|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ891193|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ894376|ARL5A|26225|ADP-ribosylation factor-like 5A##AF100740|ARL5A|26225|ADP-ribosylation factor-like 5A##AK292714|ARL5A|26225|ADP-ribosylation factor-like 5A##BC001254|ARL5A|26225|ADP-ribosylation factor-like 5A	0.145861	
chr2	191142063	191142215	reg1021220.p1	7.581	+	NM_001042519 BC005083 NM_032321 AK313395	-96499	+	NM_001042520	-127168	+	NM_001042521	-139654	+	TSC_hg19_v1_chr2_-_191184553 AK222979 AK223023 AK308042 BC067822 AK313651 U66669 BC005190	42400	-	NM_014362 NM_198047	42631	-	NM_001128928 NM_002194 TSC_hg19_v1_chr2_+_191208270	66097	+	NM_001042519|C2orf88|84281|chromosome 2 open reading frame 88##BC005083|C2orf88|84281|chromosome 2 open reading frame 88##NM_032321|C2orf88|84281|chromosome 2 open reading frame 88##AK313395|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042521|C2orf88|84281|chromosome 2 open reading frame 88##AK222979|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK223023|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK308042|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##BC067822|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK313651|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##U66669|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##BC005190|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_014362|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_198047|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_001128928|INPP1|3628|inositol polyphosphate-1-phosphatase##NM_002194|INPP1|3628|inositol polyphosphate-1-phosphatase	0.688667	CTCF.p2:10:0.689
chr2	43804575	43804685	reg1016546.p2	7.581	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-350888	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-350900	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-351285	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	18518	-	TSC_hg19_v1_chr2_+_43864411 BC063310	59783	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	59809	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.935497	CTCF.p2:-6:0.935
chr8	66557325	66557457	reg1017483.p1	7.581	+	NM_001145839 NM_014637 TSC_hg19_v1_chr8_+_66556973 AK316202 BX647507 AK304716 BC036116 BC043498 AK298945	-431	+	TSC_hg19_v1_chr8_-_66546413 BC011607 BC018846 NM_018120	-10959	-	TSC_hg19_v1_chr8_-_66546404 AK304463	-10985	-	NM_001145838 CU692168 BX537854 D13634	24776	+	HQ258418 AK290801 BC058025 BC126360 NM_002603 U67932	143860	-	NM_001242318	196577	-	NM_001145839|MTFR1|9650|mitochondrial fission regulator 1##NM_014637|MTFR1|9650|mitochondrial fission regulator 1##AK316202|MTFR1|9650|mitochondrial fission regulator 1##BX647507|MTFR1|9650|mitochondrial fission regulator 1##AK304716|MTFR1|9650|mitochondrial fission regulator 1##BC036116|MTFR1|9650|mitochondrial fission regulator 1##BC043498|MTFR1|9650|mitochondrial fission regulator 1##AK298945|MTFR1|9650|mitochondrial fission regulator 1##BC011607|ARMC1|55156|armadillo repeat containing 1##BC018846|ARMC1|55156|armadillo repeat containing 1##NM_018120|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1##NM_001145838|MTFR1|9650|mitochondrial fission regulator 1##BX537854|MTFR1|9650|mitochondrial fission regulator 1##D13634|MTFR1|9650|mitochondrial fission regulator 1##HQ258418|PDE7A|5150|phosphodiesterase 7A##AK290801|PDE7A|5150|phosphodiesterase 7A##BC058025|PDE7A|5150|phosphodiesterase 7A##BC126360|PDE7A|5150|phosphodiesterase 7A##NM_002603|PDE7A|5150|phosphodiesterase 7A##U67932|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A	0.62078	CTCF.p2:-11:0.621
chr10	60712671	60712851	reg1005657.p2	7.580	+	TSC_hg19_v1_chr10_+_60272869 NM_001080512 AY726586	-439849	+	BC029815 TSC_hg19_v1_chr10_+_60145169 AK312558 M62810 NM_003201 BC018628 BC104482 BC126366 EU279428 HQ258758 AB451241 AB451366 AB464302 BT019658 BT019659 CR407653	-567556	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	-617925	+	TSC_hg19_v1_chr10_-_60936189 AK055418	223445	-	AL834339 NM_032439 TSC_hg19_v1_chr10_+_60936408 CR749429	223627	+	BC011268 AK054956 TSC_hg19_v1_chr10_+_60936573 AB384640 AM392743	223799	+	NM_001080512|BICC1|80114|bicaudal C homolog 1 (Drosophila)##AY726586|BICC1|80114|bicaudal C homolog 1 (Drosophila)##BC029815|TFAM|7019|transcription factor A, mitochondrial##AK312558|TFAM|7019|transcription factor A, mitochondrial##M62810|TFAM|7019|transcription factor A, mitochondrial##NM_003201|TFAM|7019|transcription factor A, mitochondrial##BC018628|TFAM|7019|transcription factor A, mitochondrial##BC104482|TFAM|7019|transcription factor A, mitochondrial##BC126366|TFAM|7019|transcription factor A, mitochondrial##EU279428|TFAM|7019|transcription factor A, mitochondrial##HQ258758|TFAM|7019|transcription factor A, mitochondrial##AB451241|TFAM|7019|transcription factor A, mitochondrial##AB451366|TFAM|7019|transcription factor A, mitochondrial##BT019658|TFAM|7019|transcription factor A, mitochondrial##BT019659|TFAM|7019|transcription factor A, mitochondrial##CR407653|TFAM|7019|transcription factor A, mitochondrial##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	0.0	
chr16	67555527	67555644	reg1009940.p2	7.580	+	NM_001138 U88063	-37870	-	CU679153 DQ893270 DQ896601 X71490 TSC_hg19_v1_chr16_-_67515051 AK300570 AK313035 AK125522 BC008861 NM_004691	-40541	-	TSC_hg19_v1_chr16_+_67465023 U26726 BC036780 BC064536 NM_000196 U14631	-90555	+	TSC_hg19_v1_chr16_+_67562734 NM_024519 AK127792 NM_001193522 AK307467 BC012730	7156	+	NM_001193523 AK293748	7999	+	TSC_hg19_v1_chr16_+_67571364 NM_001193524 BC021284 AK295677	15802	+	NM_001138|AGRP|181|agouti related protein homolog (mouse)##U88063|AGRP|181|agouti related protein homolog (mouse)##DQ893270|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##DQ896601|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##X71490|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK300570|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK313035|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK125522|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##BC008861|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_004691|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_024519|FAM65A|79567|family with sequence similarity 65, member A##AK127792|FAM65A|79567|family with sequence similarity 65, member A##NM_001193522|FAM65A|79567|family with sequence similarity 65, member A##AK307467|FAM65A|79567|family with sequence similarity 65, member A##NM_001193523|FAM65A|79567|family with sequence similarity 65, member A##AK293748|FAM65A|79567|family with sequence similarity 65, member A##NM_001193524|FAM65A|79567|family with sequence similarity 65, member A##AK295677|FAM65A|79567|family with sequence similarity 65, member A	0.983551	CTCF.p2:-6:0.984
chr3	49741003	49741126	reg1018378.p1	7.580	+	TSC_hg19_v1_chr3_+_49727015 AK096353	-14041	+	TSC_hg19_v1_chr3_+_49726989 BC112900 AK126883 AK308130 NM_022064 BC130632 AL832344 AL832138 CR627051	-14072	+	TSC_hg19_v1_chr3_+_49726970 AL832034 AK308607	-14098	+	BC101363 BC101364 BC101365 TSC_hg19_v1_chr3_-_49757117 AY358134 BC110418 NM_198722	16083	-	AF135421 BC001141 BC008033 TSC_hg19_v1_chr3_-_49761385 AB058754 AK291700 AK024319 NM_013334 NM_021971	20281	-	NM_001242829	82562	-	AK096353|RNF123|63891|ring finger protein 123##BC112900|RNF123|63891|ring finger protein 123##AK126883|RNF123|63891|ring finger protein 123##AK308130|RNF123|63891|ring finger protein 123##NM_022064|RNF123|63891|ring finger protein 123##BC130632|RNF123|63891|ring finger protein 123##AL832344|RNF123|63891|ring finger protein 123##AL832138|RNF123|63891|ring finger protein 123##CR627051|RNF123|63891|ring finger protein 123##AL832034|RNF123|63891|ring finger protein 123##AK308607|RNF123|63891|ring finger protein 123##BC101363|AMIGO3|386724|adhesion molecule with Ig-like domain 3##BC101364|AMIGO3|386724|adhesion molecule with Ig-like domain 3##BC101365|AMIGO3|386724|adhesion molecule with Ig-like domain 3##AY358134|AMIGO3|386724|adhesion molecule with Ig-like domain 3##BC110418|AMIGO3|386724|adhesion molecule with Ig-like domain 3##NM_198722|AMIGO3|386724|adhesion molecule with Ig-like domain 3##AF135421|GMPPB|29925|GDP-mannose pyrophosphorylase B##BC001141|GMPPB|29925|GDP-mannose pyrophosphorylase B##BC008033|GMPPB|29925|GDP-mannose pyrophosphorylase B##AK291700|GMPPB|29925|GDP-mannose pyrophosphorylase B##AK024319|GMPPB|29925|GDP-mannose pyrophosphorylase B##NM_013334|GMPPB|29925|GDP-mannose pyrophosphorylase B##NM_021971|GMPPB|29925|GDP-mannose pyrophosphorylase B##NM_001242829|IP6K1|9807|inositol hexakisphosphate kinase 1	0.998872	CTCF.p2:-2:0.999
chr7	37535331	37535441	reg1017496.p2	7.580	+	NM_001206480	-46492	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	-46831	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	-46918	-	BC043356 TSC_hg19_v1_chr7_+_37723380	187996	+	AB529245 AY288420 BC120951 BC120952 NM_181791	244609	+	BC036816 NM_016616	352812	+	NM_001206480|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##AY288420|GPR141|353345|G protein-coupled receptor 141##BC120951|GPR141|353345|G protein-coupled receptor 141##BC120952|GPR141|353345|G protein-coupled receptor 141##NM_181791|GPR141|353345|G protein-coupled receptor 141##BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)	0.05901	
chr12	1714486	1714609	reg1018695.p1	7.579	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	-11196	-	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-614095	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-655721	-	AY009399 NM_030775	11674	+	BC001749 NM_032642	23864	+	AK127196 TSC_hg19_v1_chr12_+_1800187	85619	+	BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B##AK127196|ADIPOR2|79602|adiponectin receptor 2	0.677445	CTCF.p2:26:0.677
chr16	25850160	25850277	reg1017081.p1	7.579	+	AF105378 NM_006040	-146872	+	TSC_hg19_v1_chr16_-_25269141 AK303472	-581013	-	BX648785 AK131342 NM_001012981 AK302399	-581359	-	NM_001145545 BC031257 AK311574	1228029	+	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	1364609	+	AK297166 NM_001145348	1365077	+	AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##BX648785|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK131342|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001012981|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK302399|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5	0.975313	CTCF.p2:10:0.975
chr6_mann_hap4	2193691	2193817	reg1029425.p2	7.579	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.669371	CTCF.p2:4:0.669
chr8	111038835	111038930	reg1018015.p1	7.579	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-51916	-	NM_001099743 NM_001099744	-334863	-	AK290469 NM_001099745 NM_001099746	-345649	-	AB114605 NM_198124	3350499	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	3410247	-	TSC_hg19_v1_chr8_-_116680208 AK304046	5641338	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.135329	
chr19	47787703	47787817	reg1017767.p2	7.578	+	TSC_hg19_v1_chr19_+_47778141 BC022076 BC045749 NM_178511 BC064510	-9624	+	TSC_hg19_v1_chr19_+_47759811 BC002787 BC009743	-27942	+	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	-27999	+	BC008982 NM_001736 TSC_hg19_v1_chr19_+_47813117 M62505	25342	+	AB038237 NM_018485	52610	+	NM_014681 TSC_hg19_v1_chr19_+_47852571 AK304710	64809	+	BC022076|PRR24|255783|proline rich 24##BC045749|PRR24|255783|proline rich 24##NM_178511|PRR24|255783|proline rich 24##BC064510|PRR24|255783|proline rich 24##BC002787|CCDC9|26093|coiled-coil domain containing 9##BC009743|CCDC9|26093|coiled-coil domain containing 9##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9##BC008982|C5AR1|728|complement component 5a receptor 1##NM_001736|C5AR1|728|complement component 5a receptor 1##M62505|C5AR1|728|complement component 5a receptor 1##AB038237|GPR77|27202|G protein-coupled receptor 77##NM_018485|GPR77|27202|G protein-coupled receptor 77##NM_014681|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34##AK304710|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34	0.859477	CTCF.p2:-12:0.785
chr2	161108913	161109051	reg1018442.p1	7.578	+	AK304203 AL831998 TSC_hg19_v1_chr2_-_161056784 AK290300 AK313944	-52187	-	AB463075 AM393800 M35198 NM_000888 BC121178 BC143656	-52395	-	U17033 U17034 NM_001007267 NM_001195641 NM_007366 TSC_hg19_v1_chr2_-_160919148	-189847	-	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	21207	-	CU676342 D28482 X77494 AK225887 L11289 TSC_hg19_v1_chr2_-_161350025 AK309949 BC012992 BC012993 AK297812	240977	-	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	241335	-	AK304203|ITGB6|3694|integrin, beta 6##AL831998|ITGB6|3694|integrin, beta 6##AK290300|ITGB6|3694|integrin, beta 6##AK313944|ITGB6|3694|integrin, beta 6##AM393800|ITGB6|3694|integrin, beta 6##M35198|ITGB6|3694|integrin, beta 6##NM_000888|ITGB6|3694|integrin, beta 6##BC121178|ITGB6|3694|integrin, beta 6##BC143656|ITGB6|3694|integrin, beta 6##U17033|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##U17034|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001007267|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001195641|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_007366|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	0.0	
chr3	137899587	137899702	reg1020435.p1	7.578	+	AF180919 TSC_hg19_v1_chr3_-_137893764 NM_016216	-5875	-	BC009472 TSC_hg19_v1_chr3_-_137893737 AK094147	-5915	-	DQ895420 EU176332 TSC_hg19_v1_chr3_-_137893704	-5972	-	TSC_hg19_v1_chr3_+_137906372 NM_014154 NM_015396 NM_213654 BC032661 AK296757 AK299769 AF161541 AK304558 AK296837 BC013424 AF109184 AK289577 BC041699	6699	+	AK094830 NM_178130	149083	-	NM_001252091 NM_012219 AK124954	166869	+	AF180919|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##NM_016216|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##BC009472|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##AK094147|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##DQ895420|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##EU176332|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##NM_014154|ARMC8|25852|armadillo repeat containing 8##NM_015396|ARMC8|25852|armadillo repeat containing 8##NM_213654|ARMC8|25852|armadillo repeat containing 8##BC032661|ARMC8|25852|armadillo repeat containing 8##AK296757|ARMC8|25852|armadillo repeat containing 8##AK299769|ARMC8|25852|armadillo repeat containing 8##AF161541|ARMC8|25852|armadillo repeat containing 8##AK304558|ARMC8|25852|armadillo repeat containing 8##AK296837|ARMC8|25852|armadillo repeat containing 8##BC013424|ARMC8|25852|armadillo repeat containing 8##AF109184|ARMC8|25852|armadillo repeat containing 8##AK289577|ARMC8|25852|armadillo repeat containing 8##BC041699|ARMC8|25852|armadillo repeat containing 8##AK094830|NME9|347736|NME gene family member 9##NM_178130|NME9|347736|NME gene family member 9##NM_001252091|MRAS|22808|muscle RAS oncogene homolog##NM_012219|MRAS|22808|muscle RAS oncogene homolog##AK124954|MRAS|22808|muscle RAS oncogene homolog	0.988783	CTCF.p2:-5:0.989
chrX	114885387	114885511	reg1018450.p1	7.578	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-57581	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-88407	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-89843	+	BC003645 TSC_hg19_v1_chrX_-_115085443	199990	-	AK313927 NM_000686 X87723 U16957	416546	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	682318	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.900675	CTCF.p2:-19:0.901
chr11	133691715	133691845	reg1018029.p2	7.576	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	-289466	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-878175	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-878766	-	AF521713 AK098717 NM_174927 BC058039	23601	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	135102	-	AJ416101 NM_001205329 NM_032801 AY358335 TSC_hg19_v1_chr11_+_133938938 AK074769 AF448478	247101	+	AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B##AJ416101|JAM3|83700|junctional adhesion molecule 3##NM_001205329|JAM3|83700|junctional adhesion molecule 3##NM_032801|JAM3|83700|junctional adhesion molecule 3##AY358335|JAM3|83700|junctional adhesion molecule 3##AK074769|JAM3|83700|junctional adhesion molecule 3##AF448478|JAM3|83700|junctional adhesion molecule 3	0.996144	CTCF.p2:9:0.996
chr12	103384365	103384545	reg1016154.p1	7.576	+	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-32363	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-32934	+	L47726 NM_000277 U49897	-73075	-	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	505291	-	AY311388 AJ295695 NM_017564 AB052958	596606	+	AB032773 TSC_hg19_v1_chr12_-_104234857	850369	-	DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3	0.038531	
chr16	19400619	19400743	reg1020969.p1	7.576	+	TSC_hg19_v1_chr16_+_19179561 NM_016524 BC004518 AF220560 AB527504 CU678742	-220930	+	TSC_hg19_v1_chr16_+_19125253 AK096327 NM_001034841	-275433	+	TSC_hg19_v1_chr16_+_19079232 AL136647 NM_001190983 BC043272	-321416	+	BC070101 NM_001105248 NM_001105249	21375	+	AY236494 NM_024780 BC038118 AK097718 BC027602 AK131202	67123	+	AY463154 BC014981 TSC_hg19_v1_chr16_-_19533421 AF306698 BC025273 BC001538 AF212862 BC012153 AK312912 NM_016641	132695	-	NM_016524|SYT17|51760|synaptotagmin XVII##BC004518|SYT17|51760|synaptotagmin XVII##AF220560|SYT17|51760|synaptotagmin XVII##AK096327|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##NM_001034841|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##AL136647|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_001190983|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC043272|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC070101|TMC5|79838|transmembrane channel-like 5##NM_001105248|TMC5|79838|transmembrane channel-like 5##NM_001105249|TMC5|79838|transmembrane channel-like 5##AY236494|TMC5|79838|transmembrane channel-like 5##NM_024780|TMC5|79838|transmembrane channel-like 5##BC038118|TMC5|79838|transmembrane channel-like 5##AK097718|TMC5|79838|transmembrane channel-like 5##BC027602|TMC5|79838|transmembrane channel-like 5##AK131202|TMC5|79838|transmembrane channel-like 5##AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1##NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1	0.982391	CTCF.p2:4:0.982
chr20	31044898	31044996	reg1014790.p2	7.576	+	TSC_hg19_v1_chr20_+_31037448 AL080086	-7445	+	AB023195 TSC_hg19_v1_chr20_+_31017235	-27736	+	TSC_hg19_v1_chr20_+_30946787 AK122923	-98121	+	AK056286 TSC_hg19_v1_chr20_-_31071290 NM_080616	26318	-	BC038088 TSC_hg19_v1_chr20_-_31071385	26444	-	BC023657 BC065483 TSC_hg19_v1_chr20_-_31172902	127976	-	AB023195|ASXL1|171023|additional sex combs like 1 (Drosophila)##AK122923|ASXL1|171023|additional sex combs like 1 (Drosophila)##AK056286|C20orf112|140688|chromosome 20 open reading frame 112##NM_080616|C20orf112|140688|chromosome 20 open reading frame 112##BC038088|C20orf112|140688|chromosome 20 open reading frame 112##BC023657|LOC284804|284804|uncharacterized LOC284804##BC065483|LOC284804|284804|uncharacterized LOC284804	0.234522	CTCF.p2:-8:0.235
chr4	86890244	86890400	reg1018976.p1	7.576	+	AL136646 NM_031305	-38897	+	AK307423 TSC_hg19_v1_chr4_+_86749064	-141268	+	BC098580 TSC_hg19_v1_chr4_+_86699865 AK098193	-190424	+	AK057723 NM_138981	138483	-	BC022492 TSC_hg19_v1_chr4_-_87281197 BC035057	390874	-	NM_138980 NM_138982	391052	-	AL136646|ARHGAP24|83478|Rho GTPase activating protein 24##NM_031305|ARHGAP24|83478|Rho GTPase activating protein 24##AK307423|ARHGAP24|83478|Rho GTPase activating protein 24##BC098580|ARHGAP24|83478|Rho GTPase activating protein 24##AK098193|ARHGAP24|83478|Rho GTPase activating protein 24##AK057723|MAPK10|5602|mitogen-activated protein kinase 10##NM_138981|MAPK10|5602|mitogen-activated protein kinase 10##BC022492|MAPK10|5602|mitogen-activated protein kinase 10##BC035057|MAPK10|5602|mitogen-activated protein kinase 10##NM_138980|MAPK10|5602|mitogen-activated protein kinase 10##NM_138982|MAPK10|5602|mitogen-activated protein kinase 10	0.867761	CTCF.p2:10:0.868
chr8	32082913	32083045	reg1018266.p1	7.576	+	NM_013962	-585712	+	TSC_hg19_v1_chr8_+_30891325 AF091214	-1191688	+	AF195513 AY077841 NM_001015508	-1191749	-	AK298132 NM_001160002 NM_001160004 NM_001160005 NM_001160007 NM_001160008 NM_004495 NM_013956 NM_013957 NM_013958 NM_013960 NM_013964 M94168 BC006492 TSC_hg19_v1_chr8_+_32405834 M94167 AF026146 AK097005 AK290730 L12261	322810	+	AK289927 NM_013959	421271	+	NM_001159996 AK293270 AK293240	496413	+	NM_013962|NRG1|3084|neuregulin 1##AF091214|WRN|7486|Werner syndrome, RecQ helicase-like##AF195513|PURG|29942|purine-rich element binding protein G##AY077841|PURG|29942|purine-rich element binding protein G##NM_001015508|PURG|29942|purine-rich element binding protein G##AK298132|NRG1|3084|neuregulin 1##NM_001160002|NRG1|3084|neuregulin 1##NM_001160004|NRG1|3084|neuregulin 1##NM_001160005|NRG1|3084|neuregulin 1##NM_001160007|NRG1|3084|neuregulin 1##NM_001160008|NRG1|3084|neuregulin 1##NM_004495|NRG1|3084|neuregulin 1##NM_013956|NRG1|3084|neuregulin 1##NM_013957|NRG1|3084|neuregulin 1##NM_013958|NRG1|3084|neuregulin 1##NM_013960|NRG1|3084|neuregulin 1##NM_013964|NRG1|3084|neuregulin 1##M94168|NRG1|3084|neuregulin 1##BC006492|NRG1|3084|neuregulin 1##M94167|NRG1|3084|neuregulin 1##AF026146|NRG1|3084|neuregulin 1##AK097005|NRG1|3084|neuregulin 1##AK290730|NRG1|3084|neuregulin 1##L12261|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1##NM_001159996|NRG1|3084|neuregulin 1##AK293270|NRG1|3084|neuregulin 1##AK293240|NRG1|3084|neuregulin 1	0.993507	CTCF.p2:0:0.994
chrX	136514924	136515030	reg1018736.p2	7.576	+	BC069439 NM_054021 CU686814	-401142	-	TSC_hg19_v1_chrX_+_135991587 AK055694	-523421	+	TSC_hg19_v1_chrX_-_135962939 NM_001164803 NM_002139	-552042	-	TSC_hg19_v1_chrX_+_136648313 AF028706 NM_003413	133352	+	EU532020 TSC_hg19_v1_chrX_+_136648691 BC113393 BC113395 AB464363 HQ258447	133790	+	AF100143 TSC_hg19_v1_chrX_-_137793504 AK289960 BC034340	1278477	-	BC069439|GPR101|83550|G protein-coupled receptor 101##NM_054021|GPR101|83550|G protein-coupled receptor 101##NM_001164803|RBMX|27316|RNA binding motif protein, X-linked##NM_002139|RBMX|27316|RNA binding motif protein, X-linked##AF028706|ZIC3|7547|Zic family member 3##NM_003413|ZIC3|7547|Zic family member 3##EU532020|ZIC3|7547|Zic family member 3##BC113393|ZIC3|7547|Zic family member 3##BC113395|ZIC3|7547|Zic family member 3##HQ258447|ZIC3|7547|Zic family member 3##AF100143|FGF13|2258|fibroblast growth factor 13##AK289960|FGF13|2258|fibroblast growth factor 13##BC034340|FGF13|2258|fibroblast growth factor 13	0.93592	CTCF.p2:-8:0.936
chr11	64071874	64072014	reg1015829.p1	7.575	+	AL117564 NM_001039496 AM392988 AB590987	-4073	+	TSC_hg19_v1_chr11_+_64058772 AK309443 NM_033310 BC067791 AF259500 AK296021	-13113	+	AJ250392 NM_001170880 NM_020155	-18363	+	TSC_hg19_v1_chr11_+_64073040 L38487 NM_004451 BC063795 BC073956	1124	+	TSC_hg19_v1_chr11_-_64085009 AK312050 DQ892261 DQ895463 BC105294 BC029482 BC017172 AF161501 AF229068 NM_016404	13077	-	BC110983 NM_012094 NM_181651 NM_181652 TSC_hg19_v1_chr11_+_64085600 AF197952	13635	+	AL117564|C11orf20|25858|chromosome 11 open reading frame 20##NM_001039496|C11orf20|25858|chromosome 11 open reading frame 20##AM392988|C11orf20|25858|chromosome 11 open reading frame 20##AK309443|KCNK4|50801|potassium channel, subfamily K, member 4##NM_033310|KCNK4|50801|potassium channel, subfamily K, member 4##BC067791|KCNK4|50801|potassium channel, subfamily K, member 4##AF259500|KCNK4|50801|potassium channel, subfamily K, member 4##AK296021|KCNK4|50801|potassium channel, subfamily K, member 4##AJ250392|GPR137|56834|G protein-coupled receptor 137##NM_001170880|GPR137|56834|G protein-coupled receptor 137##NM_020155|GPR137|56834|G protein-coupled receptor 137##L38487|ESRRA|2101|estrogen-related receptor alpha##NM_004451|ESRRA|2101|estrogen-related receptor alpha##BC063795|ESRRA|2101|estrogen-related receptor alpha##BC073956|ESRRA|2101|estrogen-related receptor alpha##AK312050|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ892261|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ895463|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC105294|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC029482|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC017172|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF161501|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF229068|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##NM_016404|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC110983|PRDX5|25824|peroxiredoxin 5##NM_012094|PRDX5|25824|peroxiredoxin 5##NM_181651|PRDX5|25824|peroxiredoxin 5##NM_181652|PRDX5|25824|peroxiredoxin 5##AF197952|PRDX5|25824|peroxiredoxin 5	0.998567	CTCF.p2:12:0.999
chr12	3764818	3764935	reg1019116.p1	7.575	+	AK125333 TSC_hg19_v1_chr12_-_3601984	-162891	-	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	-164435	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-578314	+	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	97392	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	97506	-	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	217624	-	AK125333|LOC100129223|100129223|uncharacterized LOC100129223##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11	1.13587	CTCF.p2:6:0.996
chr10	23357236	23357381	reg1020929.p1	7.574	+	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	-140327	+	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	-353818	-	AK294817 TSC_hg19_v1_chr10_-_23003038	-354271	-	BC117471 BC130380 NM_012228 BC018030 TSC_hg19_v1_chr10_+_23384507 AF151889 BC066305 AF122004 EU446941	27175	+	AB463998 NM_178161	124150	+	BC035732 NM_153714	276463	-	NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC117471|MSRB2|22921|methionine sulfoxide reductase B2##BC130380|MSRB2|22921|methionine sulfoxide reductase B2##NM_012228|MSRB2|22921|methionine sulfoxide reductase B2##BC018030|MSRB2|22921|methionine sulfoxide reductase B2##AF151889|MSRB2|22921|methionine sulfoxide reductase B2##BC066305|MSRB2|22921|methionine sulfoxide reductase B2##AF122004|MSRB2|22921|methionine sulfoxide reductase B2##EU446941|MSRB2|22921|methionine sulfoxide reductase B2##NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67	0.998537	CTCF.p2:-18:0.999
chr18	7789993	7790112	reg1018512.p1	7.574	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	-222735	+	NM_001105581	-558916	+	BC144590 NM_005559 X58531	-672268	-	TSC_hg19_v1_chr18_+_7946885 AK294492	156854	+	TSC_hg19_v1_chr18_+_8609434 BC071600 BC098407 BC050338 NM_001025300	819384	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	819694	+	NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1##AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##BC071600|RAB12|201475|RAB12, member RAS oncogene family##BC098407|RAB12|201475|RAB12, member RAS oncogene family##BC050338|RAB12|201475|RAB12, member RAS oncogene family##NM_001025300|RAB12|201475|RAB12, member RAS oncogene family	0.67561	CTCF.p2:-21:0.676
chr1	228192104	228192217	reg1019777.p1	7.573	+	AB590917 HQ258230 AB060283 AK131041 TSC_hg19_v1_chr1_-_228135634 BC111960 BC113431 NM_003395	-56529	-	BC130400 HQ258179 NM_183062	-188779	+	CU676318 TSC_hg19_v1_chr1_+_227923140 BX648570 AK054633 BC011145 BC007786	-269028	+	NM_033131 AK056278 BC103921 BC103922 BC103923 AB060284	2613	+	AK000620 NM_001024226 NM_001658 TSC_hg19_v1_chr1_+_228270371	78211	+	TSC_hg19_v1_chr1_+_228270422 BC011358 AK293553 AK297792 AK057875 AF052179	78250	+	HQ258230|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AB060283|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AK131041|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC111960|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC113431|WNT9A|7483|wingless-type MMTV integration site family, member 9A##NM_003395|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC130400|PRSS38|339501|protease, serine, 38##HQ258179|PRSS38|339501|protease, serine, 38##NM_183062|PRSS38|339501|protease, serine, 38##BX648570|SNAP47|116841|synaptosomal-associated protein, 47kDa##AK054633|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC011145|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC007786|SNAP47|116841|synaptosomal-associated protein, 47kDa##NM_033131|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK056278|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103921|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103922|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103923|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AB060284|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK000620|ARF1|375|ADP-ribosylation factor 1##NM_001024226|ARF1|375|ADP-ribosylation factor 1##NM_001658|ARF1|375|ADP-ribosylation factor 1##BC011358|ARF1|375|ADP-ribosylation factor 1##AK293553|ARF1|375|ADP-ribosylation factor 1##AK297792|ARF1|375|ADP-ribosylation factor 1##AK057875|ARF1|375|ADP-ribosylation factor 1##AF052179|ARF1|375|ADP-ribosylation factor 1	0.646968	CTCF.p2:2:0.647
chr13	37683340	37683491	reg1021642.p1	7.573	+	BC028723 NM_145203	-3615	-	AK292376 TSC_hg19_v1_chr13_-_37633791 AF445026 AF093250 AK225376 AJ130894 BC001145 AK304227 BC030686 NM_001014286 NM_017569	-49702	-	BC020773 TSC_hg19_v1_chr13_+_37574924 AF279901 AB463623 DQ893134 DQ896414	-108486	+	EU262883 EU262884 EU262885 EU262886 AY140646 AY918092 BC106709 BC106710 D13666 GU354210 D13665 TSC_hg19_v1_chr13_-_38172906 NM_001135934 NM_001135935 NM_001135936 NM_006475	489506	-	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	760483	-	NM_016617 TSC_hg19_v1_chr13_+_38923946	1240536	+	BC028723|CSNK1A1L|122011|casein kinase 1, alpha 1-like##NM_145203|CSNK1A1L|122011|casein kinase 1, alpha 1-like##AK292376|FAM48A|55578|family with sequence similarity 48, member A##AF445026|FAM48A|55578|family with sequence similarity 48, member A##AF093250|FAM48A|55578|family with sequence similarity 48, member A##AK225376|FAM48A|55578|family with sequence similarity 48, member A##AJ130894|FAM48A|55578|family with sequence similarity 48, member A##BC001145|FAM48A|55578|family with sequence similarity 48, member A##AK304227|FAM48A|55578|family with sequence similarity 48, member A##BC030686|FAM48A|55578|family with sequence similarity 48, member A##NM_001014286|FAM48A|55578|family with sequence similarity 48, member A##NM_017569|FAM48A|55578|family with sequence similarity 48, member A##BC020773|EXOSC8|11340|exosome component 8##AF279901|EXOSC8|11340|exosome component 8##DQ893134|EXOSC8|11340|exosome component 8##DQ896414|EXOSC8|11340|exosome component 8##EU262883|POSTN|10631|periostin, osteoblast specific factor##EU262884|POSTN|10631|periostin, osteoblast specific factor##EU262885|POSTN|10631|periostin, osteoblast specific factor##EU262886|POSTN|10631|periostin, osteoblast specific factor##AY140646|POSTN|10631|periostin, osteoblast specific factor##AY918092|POSTN|10631|periostin, osteoblast specific factor##BC106709|POSTN|10631|periostin, osteoblast specific factor##BC106710|POSTN|10631|periostin, osteoblast specific factor##D13666|POSTN|10631|periostin, osteoblast specific factor##GU354210|POSTN|10631|periostin, osteoblast specific factor##D13665|POSTN|10631|periostin, osteoblast specific factor##NM_001135934|POSTN|10631|periostin, osteoblast specific factor##NM_001135935|POSTN|10631|periostin, osteoblast specific factor##NM_001135936|POSTN|10631|periostin, osteoblast specific factor##NM_006475|POSTN|10631|periostin, osteoblast specific factor##BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016617|UFM1|51569|ubiquitin-fold modifier 1	0.378586	CTCF.p2:-4:0.379
chr6	6697234	6697366	reg1017695.p1	7.573	+	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	-108350	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-376390	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-376415	-	BC039678 TSC_hg19_v1_chr6_+_6725205	27861	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	410526	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	410735	+	NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1	0.994159	CTCF.p2:1:0.994
chr2	16463245	16463358	reg1018613.p1	7.572	+	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-381134	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-381306	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	-381528	-	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	383843	-	DQ860102 NM_001099218	1236404	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	1258586	+	BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1	0.98084	CTCF.p2:-5:0.981
chr2	95540084	95540174	reg1017115.p2	7.571	+	AK097438 BC021716 NM_144705 AK296678 CU692394	-2879	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3692126	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-5328411	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	151353	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	247413	-	AB049940 TSC_hg19_v1_chr2_-_95787749 BC014172 NM_031902	247583	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5##AB049940|MRPS5|64969|mitochondrial ribosomal protein S5##BC014172|MRPS5|64969|mitochondrial ribosomal protein S5##NM_031902|MRPS5|64969|mitochondrial ribosomal protein S5	1.883372	CTCF.p2:-4:0.885	CTCF.p2:20:0.998
chrX	47942737	47942851	reg1017806.p1	7.571	+	NM_001190255	-11794	-	AK307979 AK308650 NM_001037735	-12300	-	NM_001079900 AF217622	-75622	+	AK302765 NM_001205103	24582	+	AY358844 NM_205856	43808	+	NM_001079900 AF217622	47247	+	NM_001190255|ZNF630|57232|zinc finger protein 630##AK307979|ZNF630|57232|zinc finger protein 630##NM_001037735|ZNF630|57232|zinc finger protein 630##NM_001079900|SPACA5B|729201|sperm acrosome associated 5B##AF217622|SPACA5|389852|sperm acrosome associated 5##AK302765|LOC100509575|100509575|putative protein SSX6-like##NM_001205103|LOC100509575|100509575|putative protein SSX6-like##AY358844|SPACA5|389852|sperm acrosome associated 5##NM_205856|SPACA5|389852|sperm acrosome associated 5##NM_001079900|SPACA5B|729201|sperm acrosome associated 5B##AF217622|SPACA5|389852|sperm acrosome associated 5	0.230324	CTCF.p2:-1:0.230
chr10	103202076	103202187	reg1015658.p1	7.570	+	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	-88259	+	BC136321 BC069156 NM_006562 X90828	-213429	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-310953	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	145798	-	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	145878	-	TSC_hg19_v1_chr10_+_103348081 BC031695 BC001082 NM_015448 AK290154 AB527777 EU832466 EU832547 AY532267	145939	+	NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda##BC031695|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##BC001082|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##NM_015448|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AK290154|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832466|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832547|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AY532267|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)	0.024068	
chr17	1436630	1436763	reg1019678.p1	7.570	+	TSC_hg19_v1_chr17_-_1420177 AK312844 NM_001135642 NM_016532 NM_130766	-16517	-	TSC_hg19_v1_chr17_-_1419907 DQ892815 DQ896061 AB529166 AK297955 AK303907 AK307293 AB036829 AB036830 AK312585 BC004362	-16730	-	U45973 TSC_hg19_v1_chr17_-_1413071	-23663	-	BC082976 TSC_hg19_v1_chr17_-_1466077 BC027177 D30036 M73704 BC045108 BC068538 NM_006224	29386	-	AF289592 TSC_hg19_v1_chr17_-_1531711 AB120364	94944	-	TSC_hg19_v1_chr17_-_1532115 BC027923 NM_152346 BC071859	95448	-	AK312844|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_001135642|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_016532|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_130766|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ892815|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ896061|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK297955|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK303907|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK307293|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036829|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036830|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312585|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC004362|INPP5K|51763|inositol polyphosphate-5-phosphatase K##U45973|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC082976|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC027177|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D30036|PITPNA|5306|phosphatidylinositol transfer protein, alpha##M73704|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC045108|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC068538|PITPNA|5306|phosphatidylinositol transfer protein, alpha##NM_006224|PITPNA|5306|phosphatidylinositol transfer protein, alpha##AF289592|SLC43A2|124935|solute carrier family 43, member 2##AB120364|SLC43A2|124935|solute carrier family 43, member 2##BC027923|SLC43A2|124935|solute carrier family 43, member 2##NM_152346|SLC43A2|124935|solute carrier family 43, member 2##BC071859|SLC43A2|124935|solute carrier family 43, member 2	0.0	
chr22	40883796	40883918	reg1017118.p1	7.570	+	TSC_hg19_v1_chr22_-_40859427 AJ297257	-24427	-	TSC_hg19_v1_chr22_+_40766652 AK301042	-117202	+	TSC_hg19_v1_chr22_+_40766636 AY308849 BC008078	-117216	+	TSC_hg19_v1_chr22_-_41032681 AF368061	148796	-	TSC_hg19_v1_chr22_-_41032716 BC115039 NM_020831 AF448806 AB037859 BC064620 AJ297258	148847	-	AK314857 AF490537 NM_005297 BC001736 BC021146 AY745811 AY747629 CR456497 AB063174 CU013094 CU013382 AB463112 AY562945 BT006725 DQ893603 DQ895065	191364	+	AJ297257|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AK301042|SGSM3|27352|small G protein signaling modulator 3##AY308849|SGSM3|27352|small G protein signaling modulator 3##BC008078|SGSM3|27352|small G protein signaling modulator 3##AF368061|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC115039|MKL1|57591|megakaryoblastic leukemia (translocation) 1##NM_020831|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF448806|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AB037859|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC064620|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AJ297258|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AK314857|MCHR1|2847|melanin-concentrating hormone receptor 1##AF490537|MCHR1|2847|melanin-concentrating hormone receptor 1##NM_005297|MCHR1|2847|melanin-concentrating hormone receptor 1##BC001736|MCHR1|2847|melanin-concentrating hormone receptor 1##BC021146|MCHR1|2847|melanin-concentrating hormone receptor 1##AY745811|MCHR1|2847|melanin-concentrating hormone receptor 1##AY747629|MCHR1|2847|melanin-concentrating hormone receptor 1##CR456497|MCHR1|2847|melanin-concentrating hormone receptor 1##AB063174|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013094|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013382|MCHR1|2847|melanin-concentrating hormone receptor 1##AY562945|MCHR1|2847|melanin-concentrating hormone receptor 1##BT006725|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ893603|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ895065|MCHR1|2847|melanin-concentrating hormone receptor 1	0.939695	CTCF.p2:2:0.940
chr6_qbl_hap6	2460723	2460819	reg1019546.p1	7.570	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr12	18377813	18377915	reg1016311.p1	7.569	+	AK026308 BC042888 NM_024730	-134782	-	AF258348 BC017777 AB044746 AK095595 AK308826 NM_001001395 NM_001243609	-1616823	-	AK308594 AK294909 NM_001243613	-1617853	-	NM_004570	36609	+	AF532185 NM_033123 AK314516 AY035866 AK292279	513089	-	BC016745 NM_033328 AB053259 AK058174 CU677705	513256	+	AK026308|RERGL|79785|RERG/RAS-like##BC042888|RERGL|79785|RERG/RAS-like##NM_024730|RERGL|79785|RERG/RAS-like##AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1##BC016745|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##NM_033328|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AB053259|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AK058174|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	0.539352	CTCF.p2:18:0.504
chr12	27167366	27167474	reg1017016.p1	7.568	+	TSC_hg19_v1_chr12_-_27167332 NM_016551	-85	-	TSC_hg19_v1_chr12_-_27167318 AK023085	-99	-	TSC_hg19_v1_chr12_-_27167274 AK002031 AB032470 BC005176	-262	-	AK309064 BC008380 NM_004264 TSC_hg19_v1_chr12_+_27175482	8062	+	TSC_hg19_v1_chr12_+_27175501 U46837 U52960 AB463863 EU446930 AK311838 CR456999	8095	+	NM_001080406	68034	-	NM_016551|TM7SF3|51768|transmembrane 7 superfamily member 3##AK023085|TM7SF3|51768|transmembrane 7 superfamily member 3##AK002031|TM7SF3|51768|transmembrane 7 superfamily member 3##AB032470|TM7SF3|51768|transmembrane 7 superfamily member 3##BC005176|TM7SF3|51768|transmembrane 7 superfamily member 3##AK309064|MED21|9412|mediator complex subunit 21##BC008380|MED21|9412|mediator complex subunit 21##NM_004264|MED21|9412|mediator complex subunit 21##U46837|MED21|9412|mediator complex subunit 21##U52960|MED21|9412|mediator complex subunit 21##EU446930|MED21|9412|mediator complex subunit 21##AK311838|MED21|9412|mediator complex subunit 21##CR456999|MED21|9412|mediator complex subunit 21##NM_001080406|C12orf71|728858|chromosome 12 open reading frame 71	0.066819	
chr1	161109687	161109848	reg1020191.p1	7.567	+	BC013910 TSC_hg19_v1_chr1_-_161102470 NM_001039711 NM_032998	-7300	-	TSC_hg19_v1_chr1_-_161102376 BC016724 AK296629 AK001497	-7393	-	TSC_hg19_v1_chr1_-_161102257 NM_001039712	-7506	-	TSC_hg19_v1_chr1_+_161123548 NM_016406 BC005187 AF161504 AF151884 AK292776	13800	+	TSC_hg19_v1_chr1_+_161123772 AK311562 AB154405 DQ893161 DQ896457	14004	+	TSC_hg19_v1_chr1_+_161129276 NM_001014443 NM_012475 AB208899	19491	+	BC013910|DEDD|9191|death effector domain containing##NM_001039711|DEDD|9191|death effector domain containing##NM_032998|DEDD|9191|death effector domain containing##BC016724|DEDD|9191|death effector domain containing##AK296629|DEDD|9191|death effector domain containing##AK001497|DEDD|9191|death effector domain containing##NM_001039712|DEDD|9191|death effector domain containing##NM_016406|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##BC005187|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##AF161504|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##AF151884|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##AK292776|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##AB154405|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##DQ893161|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##DQ896457|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##NM_001014443|USP21|27005|ubiquitin specific peptidase 21##NM_012475|USP21|27005|ubiquitin specific peptidase 21##AB208899|USP21|27005|ubiquitin specific peptidase 21	0.032018	
chr11	62895699	62895841	reg1019390.p2	7.567	+	AK307850 AK298341 AB042505 AK298351 AK313187 BC022387 NM_001184732 NM_001184733 NM_001184736 NM_004254	-112472	-	AK298374 AF057039 AF104038 AF124373 AB009698 AB009697 AK091879 BC033682 AK055764 NM_004790 NM_153276 NM_153277 NM_153278	-143338	-	BC022984 NM_000738 AJ006520 TSC_hg19_v1_chr11_-_62689135	-206697	-	BC034394 NM_001136506	15922	-	AK127610 BC101315 BC101314 AY437532 BC101316 BC101317 NM_199352	101290	-	AK298430 AB075876 NM_001039752	161630	+	AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298374|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF057039|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF104038|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF124373|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009698|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009697|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK091879|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##BC033682|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK055764|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_004790|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153276|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153277|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153278|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1##NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1##AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1##BC034394|SLC22A24|283238|solute carrier family 22, member 24##NM_001136506|SLC22A24|283238|solute carrier family 22, member 24##AK127610|SLC22A25|387601|solute carrier family 22, member 25##BC101315|SLC22A25|387601|solute carrier family 22, member 25##BC101314|SLC22A25|387601|solute carrier family 22, member 25##AY437532|SLC22A25|387601|solute carrier family 22, member 25##BC101316|SLC22A25|387601|solute carrier family 22, member 25##BC101317|SLC22A25|387601|solute carrier family 22, member 25##NM_199352|SLC22A25|387601|solute carrier family 22, member 25##AK298430|SLC22A10|387775|solute carrier family 22, member 10##AB075876|SLC22A10|387775|solute carrier family 22, member 10##NM_001039752|SLC22A10|387775|solute carrier family 22, member 10	0.830069	CTCF.p2:-14:0.830
chr19	6126500	6126609	reg1000882.p2	7.567	+	TSC_hg19_v1_chr19_-_6110613 BC028579 AK303321 NM_000635 NM_134433	-15942	-	TSC_hg19_v1_chr19_-_6110512 AK291196 BC071571 X76091	-16031	-	AK299856 TSC_hg19_v1_chr19_-_5978306 NM_003624 NM_007320 NM_007322	-148270	-	AY009107 BC022027 AK093433 AX748123 AK302604 AJ577571 NM_030924 BC090046 AL136854	9199	+	TSC_hg19_v1_chr19_-_6199558 AK056073	72993	-	AB463904 TSC_hg19_v1_chr19_-_6279803	153249	-	BC028579|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK303321|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_000635|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_134433|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK291196|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC071571|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##X76091|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK299856|RANBP3|8498|RAN binding protein 3##NM_003624|RANBP3|8498|RAN binding protein 3##NM_007320|RANBP3|8498|RAN binding protein 3##NM_007322|RANBP3|8498|RAN binding protein 3##AY009107|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC022027|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK093433|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK302604|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AJ577571|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##NM_030924|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC090046|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AL136854|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2	0.745535	CTCF.p2:-26:0.746
chr8	141780436	141780563	reg1018248.p1	7.567	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-134875	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-258936	+	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	-259107	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	230757	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	358238	+	AK128212 NM_001080431	458173	-	BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4	0.0	
chrX	48794479	48794660	reg1015851.p1	7.567	+	U77735 BC018111 AK312745 TSC_hg19_v1_chrX_-_48776302 AK290931 NM_006875	-18222	-	D84454 NM_001042498	-25335	-	CR450287 D88146 NM_005660 AK225508 AK290284 AK293415 AK293419 AK298484 AK299748 TSC_hg19_v1_chrX_-_48768926 BC035747 NM_001032289 AK292816	-25638	-	TSC_hg19_v1_chrX_-_48814831 BC028225	20236	-	TSC_hg19_v1_chrX_-_48814870 BC009917 NM_001136157 NM_001136158 NM_017602	20305	-	TSC_hg19_v1_chrX_-_48815168 BC098440	20562	-	U77735|PIM2|11040|pim-2 oncogene##BC018111|PIM2|11040|pim-2 oncogene##AK312745|PIM2|11040|pim-2 oncogene##AK290931|PIM2|11040|pim-2 oncogene##NM_006875|PIM2|11040|pim-2 oncogene##D84454|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001042498|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##CR450287|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##D88146|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_005660|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK225508|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK290284|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293415|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293419|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK298484|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK299748|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC035747|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001032289|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK292816|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC028225|OTUD5|55593|OTU domain containing 5##BC009917|OTUD5|55593|OTU domain containing 5##NM_001136157|OTUD5|55593|OTU domain containing 5##NM_001136158|OTUD5|55593|OTU domain containing 5##NM_017602|OTUD5|55593|OTU domain containing 5##BC098440|OTUD5|55593|OTU domain containing 5	0.0	
chr10	100932052	100932133	reg1015407.p1	7.566	+	TSC_hg19_v1_chr10_-_100206705 NM_000195 NM_182639	-725381	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	-725417	-	BC002514 TSC_hg19_v1_chr10_-_100206650	-725446	-	AJ299720 AK094037 BC112356 AF282885 AF282886 AF282887 AJ299719 AK314759 NM_001166244 NM_001166245 NM_001166246 NM_021828	63502	-	TSC_hg19_v1_chr10_+_101088794 NM_020348	156732	+	TSC_hg19_v1_chr10_+_101089114 AK308618	157034	+	NM_000195|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_182639|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1##AJ299720|HPSE2|60495|heparanase 2##AK094037|HPSE2|60495|heparanase 2##BC112356|HPSE2|60495|heparanase 2##AF282885|HPSE2|60495|heparanase 2##AF282886|HPSE2|60495|heparanase 2##AF282887|HPSE2|60495|heparanase 2##AJ299719|HPSE2|60495|heparanase 2##AK314759|HPSE2|60495|heparanase 2##NM_001166244|HPSE2|60495|heparanase 2##NM_001166245|HPSE2|60495|heparanase 2##NM_001166246|HPSE2|60495|heparanase 2##NM_021828|HPSE2|60495|heparanase 2##NM_020348|CNNM1|26507|cyclin M1##AK308618|CNNM1|26507|cyclin M1	0.525225	CTCF.p2:0:0.512
chr11	32637094	32637240	reg1018952.p1	7.566	+	TSC_hg19_v1_chr11_+_32605376 AK131064 AK292139 AK304378 AK001768 AK300002 AF064603 BC051292 BC011937 BC019103 NM_006360 AK222564 AK307121 CU676384 AY769947 CR450300 DQ185042	-31769	+	TSC_hg19_v1_chr11_+_32605343 AK312512	-31827	+	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	-180098	-	BC146800 AK131470 NM_001008391 BC062749	179010	-	TSC_hg19_v1_chr11_+_32851476 BC010052 NM_024081 BC063393 AF326351	214383	+	TSC_hg19_v1_chr11_+_32914677 BC112935 NM_001076786	277408	+	AK131064|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK292139|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK304378|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK001768|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK300002|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AF064603|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC051292|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC011937|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC019103|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##NM_006360|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK222564|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK307121|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AY769947|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##CR450300|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##DQ185042|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK312512|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1##BC146800|CCDC73|493860|coiled-coil domain containing 73##AK131470|CCDC73|493860|coiled-coil domain containing 73##NM_001008391|CCDC73|493860|coiled-coil domain containing 73##BC062749|CCDC73|493860|coiled-coil domain containing 73##BC010052|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##NM_024081|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC063393|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##AF326351|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC112935|QSER1|79832|glutamine and serine rich 1##NM_001076786|QSER1|79832|glutamine and serine rich 1	0.09215	
chr1	176866992	176867173	reg1017182.p2	7.566	+	AF342989 AF342990 BC062665 BC104644 NM_020318 NM_021936 BC152552	-434770	+	AF527539 TSC_hg19_v1_chr1_-_176176377	-690706	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	-690713	-	BC142697 AB006627 BC146795 TSC_hg19_v1_chr1_-_177133827	266743	-	AK307820 AK295126 BC032870 BC049377 TSC_hg19_v1_chr1_-_177134004 NM_004319 NM_207108	266904	-	TSC_hg19_v1_chr1_-_177134042 AK309094	266993	-	AF342989|PAPPA2|60676|pappalysin 2##AF342990|PAPPA2|60676|pappalysin 2##BC062665|PAPPA2|60676|pappalysin 2##BC104644|PAPPA2|60676|pappalysin 2##NM_020318|PAPPA2|60676|pappalysin 2##NM_021936|PAPPA2|60676|pappalysin 2##BC152552|PAPPA2|60676|pappalysin 2##AF527539|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2##BC142697|ASTN1|460|astrotactin 1##AB006627|ASTN1|460|astrotactin 1##BC146795|ASTN1|460|astrotactin 1##AK307820|ASTN1|460|astrotactin 1##AK295126|ASTN1|460|astrotactin 1##BC032870|ASTN1|460|astrotactin 1##BC049377|ASTN1|460|astrotactin 1##NM_004319|ASTN1|460|astrotactin 1##NM_207108|ASTN1|460|astrotactin 1##AK309094|ASTN1|460|astrotactin 1	0.999752	CTCF.p2:23:1.000
chrX	49969269	49969405	reg1018978.p1	7.566	+	AK292463 BC126250 BC126252 NM_003886 Y15195	-3677	-	NM_139289 BC033007 BC070150 TSC_hg19_v1_chrX_-_49965024	-4324	-	NM_000084 AK308089 TSC_hg19_v1_chrX_+_49832243 AK290940	-137092	+	AJ314764 AJ314765 AJ314766 AJ416458 NM_033031 NM_033670	58202	+	TSC_hg19_v1_chrX_-_50213589 BC137319 BC137320 NM_001013742 AB183864	244325	-	TSC_hg19_v1_chrX_-_50386679 AY044234	417340	-	AK292463|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC126250|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC126252|AKAP4|8852|A kinase (PRKA) anchor protein 4##NM_003886|AKAP4|8852|A kinase (PRKA) anchor protein 4##Y15195|AKAP4|8852|A kinase (PRKA) anchor protein 4##NM_139289|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC033007|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC070150|AKAP4|8852|A kinase (PRKA) anchor protein 4##NM_000084|CLCN5|1184|chloride channel 5##AK308089|CLCN5|1184|chloride channel 5##AK290940|CLCN5|1184|chloride channel 5##AJ314764|CCNB3|85417|cyclin B3##AJ314765|CCNB3|85417|cyclin B3##AJ314766|CCNB3|85417|cyclin B3##AJ416458|CCNB3|85417|cyclin B3##NM_033031|CCNB3|85417|cyclin B3##NM_033670|CCNB3|85417|cyclin B3##BC137319|DGKK|139189|diacylglycerol kinase, kappa##BC137320|DGKK|139189|diacylglycerol kinase, kappa##NM_001013742|DGKK|139189|diacylglycerol kinase, kappa##AB183864|DGKK|139189|diacylglycerol kinase, kappa##AY044234|SHROOM4|57477|shroom family member 4	1.731943	CTCF.p2:14:0.926	CTCF.p2:-46:0.806
chr1	231686238	231686350	reg1018230.p1	7.565	+	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	-21863	+	AF229245 NM_022051	-125505	-	TSC_hg19_v1_chr1_+_231473794 BC015740	-212507	+	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	76261	+	BC006013 NM_020808 AY168879	964975	-	TSC_hg19_v1_chr1_-_232878472 AK093200	1192163	-	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)##NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)##BC015740|C1orf124|83932|chromosome 1 open reading frame 124##AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1##BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	0.676172	CTCF.p2:-5:0.676
chr17	80872301	80872397	reg1019575.p1	7.565	+	BC109036 BC109037 AK301690 AK023903 NM_024702	-74440	-	TSC_hg19_v1_chr17_+_80710051 AJ006417 DQ891885 EU176650	-162301	+	TSC_hg19_v1_chr17_+_80710000 AK091959 AX747278	-162341	+	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	134121	-	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	137320	-	TSC_hg19_v1_chr17_+_81037508 BC082252 NM_001004431 BC118558 BC118638	165193	+	BC109036|ZNF750|79755|zinc finger protein 750##BC109037|ZNF750|79755|zinc finger protein 750##AK301690|ZNF750|79755|zinc finger protein 750##AK023903|ZNF750|79755|zinc finger protein 750##NM_024702|ZNF750|79755|zinc finger protein 750##AJ006417|TBCD|6904|tubulin folding cofactor D##DQ891885|TBCD|6904|tubulin folding cofactor D##EU176650|TBCD|6904|tubulin folding cofactor D##AK091959|TBCD|6904|tubulin folding cofactor D##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like##NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like	0.171709	
chr5	102116322	102116420	reg1016962.p1	7.565	+	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	-281738	-	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	-484263	-	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-1877443	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	85159	+	M37721 TSC_hg19_v1_chr5_+_102201730 AK296521 AK290158 S75037 S75038 AB527419 AB095007 BT007419	85435	+	BC151135 BC157835 BC015325 CR627424 AK295796 AK225572 AK000132 NM_017676 TSC_hg19_v1_chr5_-_102455843	339442	-	DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase##M37721|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK296521|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK290158|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75037|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75038|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AB095007|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BT007419|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BC151135|GIN1|54826|gypsy retrotransposon integrase 1##BC157835|GIN1|54826|gypsy retrotransposon integrase 1##BC015325|GIN1|54826|gypsy retrotransposon integrase 1##CR627424|GIN1|54826|gypsy retrotransposon integrase 1##AK295796|GIN1|54826|gypsy retrotransposon integrase 1##AK225572|GIN1|54826|gypsy retrotransposon integrase 1##AK000132|GIN1|54826|gypsy retrotransposon integrase 1##NM_017676|GIN1|54826|gypsy retrotransposon integrase 1	0.980022	CTCF.p2:10:0.980
chr6	110361456	110361573	reg1003005.p4	7.565	+	BC126301 BC117298 BC043414 NM_005284 HQ258210 HQ258216 HQ709190 HQ709191	-61258	+	TSC_hg19_v1_chr6_+_110012521 AK222732	-348990	+	TSC_hg19_v1_chr6_+_110012514 AK291671 AK293422 D87464	-349006	+	TSC_hg19_v1_chr6_-_110500864 BC019019 BC021022 BC044591 AK097838 BC068546	139329	-	TSC_hg19_v1_chr6_-_110501166 NM_001024934 NM_001024935 NM_001024936 NM_003931	139671	-	TSC_hg19_v1_chr6_+_110501629 AF038392 NM_015891 BC117145 BC126114 AK314601 AK222721 BC018059 AK295055 AB528038 HQ258473 AB208903 AF061241 AF015044	140109	+	BC126301|GPR6|2830|G protein-coupled receptor 6##BC117298|GPR6|2830|G protein-coupled receptor 6##BC043414|GPR6|2830|G protein-coupled receptor 6##NM_005284|GPR6|2830|G protein-coupled receptor 6##HQ258210|GPR6|2830|G protein-coupled receptor 6##HQ258216|GPR6|2830|G protein-coupled receptor 6##HQ709190|GPR6|2830|G protein-coupled receptor 6##AK222732|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK291671|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK293422|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##D87464|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##BC044591|WASF1|8936|WAS protein family, member 1##AK097838|WASF1|8936|WAS protein family, member 1##BC068546|WASF1|8936|WAS protein family, member 1##NM_001024934|WASF1|8936|WAS protein family, member 1##NM_001024935|WASF1|8936|WAS protein family, member 1##NM_001024936|WASF1|8936|WAS protein family, member 1##NM_003931|WASF1|8936|WAS protein family, member 1##AF038392|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##NM_015891|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC117145|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC126114|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK314601|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK222721|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK295055|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##HQ258473|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AB208903|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AF061241|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AF015044|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	0.223856	CTCF.p2:3:0.224
chr16	68098752	68098879	reg1017674.p1	7.564	+	NM_018380	-41046	-	AK290578 TSC_hg19_v1_chr16_+_68057186 AB101210 AK296663 AK000406 BC006527 NM_017803	-41640	+	TSC_hg19_v1_chr16_-_68057129 BC014517	-41687	-	TSC_hg19_v1_chr16_+_68119279 NM_004555 NM_173163 NM_173165	20439	+	TSC_hg19_v1_chr16_+_68119335 AB209824	20523	+	TSC_hg19_v1_chr16_+_68119350 L41067	20554	+	NM_018380|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##AK290578|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AB101210|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK296663|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK000406|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC006527|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##NM_017803|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC014517|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##NM_004555|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173163|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173165|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##AB209824|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##L41067|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	0.013033	
chr20	58786287	58786391	reg1018121.p1	7.564	+	TSC_hg19_v1_chr20_+_58713521 AK309218 AK092805 AX747739	-72805	+	TSC_hg19_v1_chr20_+_58630979 AK091179 AX746831 NM_173644	-155344	+	BC062570 NM_021810 AK074477	-214917	+	TSC_hg19_v1_chr20_+_59827453 BC101651 BC112150 NM_001794 AK315192 L34059	1041166	+	AK308345 NM_001252338	1288137	+	NM_001252339 AK124724	1388485	+	AK092805|LOC284757|284757|uncharacterized LOC284757##AK091179|C20orf197|284756|chromosome 20 open reading frame 197##NM_173644|C20orf197|284756|chromosome 20 open reading frame 197##BC062570|CDH26|60437|cadherin 26##NM_021810|CDH26|60437|cadherin 26##AK074477|CDH26|60437|cadherin 26##BC101651|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC112150|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001794|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK315192|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##L34059|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK308345|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252338|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252339|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK124724|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)	0.654574	CTCF.p2:-5:0.655
chr4	46650278	46650406	reg1021786.p1	7.564	+	AB209295 AK293466 S62907 TSC_hg19_v1_chr4_-_46391998 NM_000807	-258429	-	TSC_hg19_v1_chr4_-_46391484 AK307128	-258829	-	TSC_hg19_v1_chr4_-_46391400 AK125179 NM_001114175	-258943	-	BC107855 BC035923 AX721204 NM_130902	260895	-	CU690038 DQ891679 DQ894864 EU176605 U30461 NM_001204266 NM_001204267 BC035055	345154	-	AK090780 NM_000809	346081	-	AB209295|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK293466|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##S62907|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_000807|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK307128|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK125179|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_001114175|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##BC107855|COX7B2|170712|cytochrome c oxidase subunit VIIb2##BC035923|COX7B2|170712|cytochrome c oxidase subunit VIIb2##NM_130902|COX7B2|170712|cytochrome c oxidase subunit VIIb2##DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##AK090780|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_000809|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	1.611657	CTCF.p2:10:0.986	CTCF.p2:104:0.625
chr6_mcf_hap5	3117381	3117483	reg1018265.p1	7.564	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.994584	CTCF.p2:-1:0.995
chr12	15675626	15675766	reg1021167.p1	7.563	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	-200145	+	NM_002848 NM_030667 TSC_hg19_v1_chr12_+_15475264 AB209729	-200436	+	AK311016 BC007997 AK295343 AK313881 NM_001190726 NM_032918	-301346	-	NM_030668 NM_030669 NM_030670 NM_030671 AF152378 AF187042 AF187043 AF187044	23585	+	TSC_hg19_v1_chr12_+_15699551 AK290982	23881	+	TSC_hg19_v1_chr12_-_15815073 AK316134	139444	-	AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AB209729|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK311016|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##BC007997|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK295343|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK313881|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_001190726|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_032918|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK290982|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK316134|EPS8|2059|epidermal growth factor receptor pathway substrate 8	0.95398	CTCF.p2:16:0.954
chr11	18866445	18866561	reg1019455.p2	7.562	+	AK294374 BC064807 AK316270 AK294673 BC039897 AK295604 AK090923 AX746685 AL832541 NM_001039970 NM_006906 NM_032781 TSC_hg19_v1_chr11_-_18813404	-53238	-	BC115396 BC115397 AK095113 NM_173588	-118756	-	TSC_hg19_v1_chr11_+_18720347 BC035692 NM_153347	-146155	+	BC096835 NM_147199	90043	-	BC063450 NM_054030	215724	-	TSC_hg19_v1_chr11_+_19138714 BC050690 BC056152 NM_001001483 NM_019028 AB097014 AB097027 AK001714 BX648156 BC036020 AK291348 AB024495 CU691124	272214	+	AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC115396|IGSF22|283284|immunoglobulin superfamily, member 22##BC115397|IGSF22|283284|immunoglobulin superfamily, member 22##AK095113|IGSF22|283284|immunoglobulin superfamily, member 22##NM_173588|IGSF22|283284|immunoglobulin superfamily, member 22##BC035692|TMEM86A|144110|transmembrane protein 86A##NM_153347|TMEM86A|144110|transmembrane protein 86A##BC096835|MRGPRX1|259249|MAS-related GPR, member X1##NM_147199|MRGPRX1|259249|MAS-related GPR, member X1##BC063450|MRGPRX2|117194|MAS-related GPR, member X2##NM_054030|MRGPRX2|117194|MAS-related GPR, member X2##BC050690|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BC056152|ZDHHC13|54503|zinc finger, DHHC-type containing 13##NM_001001483|ZDHHC13|54503|zinc finger, DHHC-type containing 13##NM_019028|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB097014|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB097027|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AK001714|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BX648156|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BC036020|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AK291348|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB024495|ZDHHC13|54503|zinc finger, DHHC-type containing 13	0.978624	CTCF.p2:14:0.979
chr8	104807821	104807954	reg1021221.p1	7.562	+	AK126939 NM_001100117	-294912	+	TSC_hg19_v1_chr8_+_104427659 AK001874	-380222	+	TSC_hg19_v1_chr8_+_104427646 AK001693	-380241	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	23688	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	544165	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	671328	-	AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK001874|DCAF13|25879|DDB1 and CUL4 associated factor 13##AK001693|DCAF13|25879|DDB1 and CUL4 associated factor 13##NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase	0.968777	CTCF.p2:-8:0.969
chr8	92405841	92405950	reg1017047.p1	7.562	+	AJ413229 NM_052832 NM_134266 AF331521 AJ413228 AJ413230	-144365	+	AK097393 NM_001129890 AK130865	-291036	+	NM_016023 TSC_hg19_v1_chr8_+_92082548 BX647772 AK293843 BC029760 AK310823 AK291646 AF151836	-323381	+	D14289 NM_175636	623990	-	TSC_hg19_v1_chr8_-_93074863 S82690	669004	-	D43638 NM_004349	669295	-	AJ413229|SLC26A7|115111|solute carrier family 26, member 7##NM_052832|SLC26A7|115111|solute carrier family 26, member 7##NM_134266|SLC26A7|115111|solute carrier family 26, member 7##AF331521|SLC26A7|115111|solute carrier family 26, member 7##AJ413228|SLC26A7|115111|solute carrier family 26, member 7##AJ413230|SLC26A7|115111|solute carrier family 26, member 7##AK097393|LRRC69|100130742|leucine rich repeat containing 69##NM_001129890|LRRC69|100130742|leucine rich repeat containing 69##AK130865|LRRC69|100130742|leucine rich repeat containing 69##NM_016023|OTUD6B|51633|OTU domain containing 6B##BX647772|OTUD6B|51633|OTU domain containing 6B##AK293843|OTUD6B|51633|OTU domain containing 6B##BC029760|OTUD6B|51633|OTU domain containing 6B##AK310823|OTUD6B|51633|OTU domain containing 6B##AK291646|OTUD6B|51633|OTU domain containing 6B##AF151836|OTUD6B|51633|OTU domain containing 6B##D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	1.469777	CTCF.p2:8:0.974	CTCF.p2:80:0.496
chr17	73585627	73585740	reg1015750.p2	7.561	+	AK074680 TSC_hg19_v1_chr17_+_73585572	-121	+	AF418286 AF418287 AF418288 AF418289 AF418290 AF418291 TSC_hg19_v1_chr17_+_73584199	-1508	+	TSC_hg19_v1_chr17_+_73553885 AK126687	-31798	+	TSC_hg19_v1_chr17_+_73598147 BC033247	12528	+	BC027861 NM_001162995	43830	+	BC062771 NM_001162997 AK131023	56998	+	AK074680|MYO15B|80022|myosin XVB pseudogene##AF418286|MYO15B|80022|myosin XVB pseudogene##AF418287|MYO15B|80022|myosin XVB pseudogene##AF418288|MYO15B|80022|myosin XVB pseudogene##AF418289|MYO15B|80022|myosin XVB pseudogene##AF418290|MYO15B|80022|myosin XVB pseudogene##AF418291|MYO15B|80022|myosin XVB pseudogene##AK126687|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC033247|MYO15B|80022|myosin XVB pseudogene##BC027861|C17orf109|643008|chromosome 17 open reading frame 109##NM_001162995|C17orf109|643008|chromosome 17 open reading frame 109##BC062771|C17orf110|100130933|chromosome 17 open reading frame 110##NM_001162997|C17orf110|100130933|chromosome 17 open reading frame 110##AK131023|C17orf110|100130933|chromosome 17 open reading frame 110	0.490524	CTCF.p2:0:0.491
chr2	120068559	120068739	reg1019456.p1	7.561	+	TSC_hg19_v1_chr2_+_119981409 AF423424 AK001691 AY029585 AY214461 BX538047 AK291608 AF238864 AF262322 AY082673 BC095421 BC042150	-87222	+	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	-87264	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	-152245	-	BC126395 BC126397 BC144012 BC144014 BC171737 NM_001017927 TSC_hg19_v1_chr2_-_120124372 BC047365 BC105805	55689	-	NM_001079862 TSC_hg19_v1_chr2_+_120124552 FM213122 FM213123 FM213124 FM213125 FM213126 FM213128 NM_001178041 NM_001178042 NM_001178043 NM_020548	55880	+	TSC_hg19_v1_chr2_+_120124566 M15887 BC006466	55935	+	AF423424|STEAP3|55240|STEAP family member 3, metalloreductase##AK001691|STEAP3|55240|STEAP family member 3, metalloreductase##AY029585|STEAP3|55240|STEAP family member 3, metalloreductase##AY214461|STEAP3|55240|STEAP family member 3, metalloreductase##BX538047|STEAP3|55240|STEAP family member 3, metalloreductase##AK291608|STEAP3|55240|STEAP family member 3, metalloreductase##AF238864|STEAP3|55240|STEAP family member 3, metalloreductase##AF262322|STEAP3|55240|STEAP family member 3, metalloreductase##AY082673|STEAP3|55240|STEAP family member 3, metalloreductase##BC095421|STEAP3|55240|STEAP family member 3, metalloreductase##BC042150|STEAP3|55240|STEAP family member 3, metalloreductase##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##BC126395|C2orf76|130355|chromosome 2 open reading frame 76##BC126397|C2orf76|130355|chromosome 2 open reading frame 76##BC144012|C2orf76|130355|chromosome 2 open reading frame 76##BC144014|C2orf76|130355|chromosome 2 open reading frame 76##BC171737|C2orf76|130355|chromosome 2 open reading frame 76##NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76##BC047365|C2orf76|130355|chromosome 2 open reading frame 76##BC105805|C2orf76|130355|chromosome 2 open reading frame 76##NM_001079862|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213122|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213123|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213124|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213125|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213126|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213128|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178041|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178042|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178043|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_020548|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##M15887|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##BC006466|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)	0.262361	CTCF.p2:-13:0.262
chr4	140973389	140973498	reg1017557.p1	7.561	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	-386309	+	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	-386453	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-496010	-	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	100895	-	NM_018717 TSC_hg19_v1_chr4_-_141075339	101889	-	AK027797 NM_032547	204996	+	AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)##NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)##AK027797|SCOC|60592|short coiled-coil protein##NM_032547|SCOC|60592|short coiled-coil protein	0.868279	CTCF.p2:1:0.868
chr4	162341140	162341280	reg1020067.p1	7.561	+	AK294459 NM_014247	-2152213	+	AK058100 NM_152543	-2384878	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-2650925	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	743941	-	TSC_hg19_v1_chr4_-_164088002 AK097352	1746782	-	TSC_hg19_v1_chr4_-_164088043 AK308601	1746827	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.0	
chr5	62697412	62697528	reg1017591.p2	7.561	+	AK123022 NM_181506 BX649157 AY358733 BC110838 AY280614	-822832	+	AK302781 NM_001134779	-982760	+	TSC_hg19_v1_chr5_+_61708589 NM_016338 AK001696 BC033776	-988846	+	AF498978 BC069159 NM_000524 AB464441 BC136263 TSC_hg19_v1_chr5_-_63257719 AK291429 AK311460	560192	-	AK314187 TSC_hg19_v1_chr5_-_63258084	560552	-	TSC_hg19_v1_chr5_+_63461666 AK090756 AX746601 NM_001113561 NM_178532 BC101277 BC101278 BC101279 AL832580 BC101397	764211	+	AK123022|LRRC70|100130733|leucine rich repeat containing 70##NM_181506|LRRC70|100130733|leucine rich repeat containing 70##AY358733|LRRC70|100130733|leucine rich repeat containing 70##BC110838|LRRC70|100130733|leucine rich repeat containing 70##AY280614|LRRC70|100130733|leucine rich repeat containing 70##AK302781|IPO11|51194|importin 11##NM_001134779|IPO11|51194|importin 11##NM_016338|IPO11|51194|importin 11##AK001696|IPO11|51194|importin 11##BC033776|IPO11|51194|importin 11##AF498978|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC069159|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_000524|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC136263|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK291429|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK090756|RNF180|285671|ring finger protein 180##NM_001113561|RNF180|285671|ring finger protein 180##NM_178532|RNF180|285671|ring finger protein 180##BC101277|RNF180|285671|ring finger protein 180##BC101278|RNF180|285671|ring finger protein 180##BC101279|RNF180|285671|ring finger protein 180##AL832580|RNF180|285671|ring finger protein 180##BC101397|RNF180|285671|ring finger protein 180	0.999531	CTCF.p2:-5:1.000
chr5	7755219	7755374	reg1018444.p1	7.561	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	-359028	+	AK308405 NM_001171806 AK303516	-1009174	+	NM_001171805 NM_006999 AF089896 BC084567	-1040546	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	95963	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	113836	-	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	113963	+	NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase	0.446902	CTCF.p2:9:0.424
chr16	29801759	29801867	reg1017428.p1	7.560	+	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	-12227	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	-44512	-	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-111331	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	238	+	TSC_hg19_v1_chr16_+_29802074 AK316389 BC028155 BT007259 DQ890771 DQ893652 DQ893932 DQ895829	274	+	FJ532357 TSC_hg19_v1_chr16_+_29817510	15655	+	NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22##AK316389|KIF22|3835|kinesin family member 22##BC028155|KIF22|3835|kinesin family member 22##BT007259|KIF22|3835|kinesin family member 22##DQ890771|KIF22|3835|kinesin family member 22##DQ893652|KIF22|3835|kinesin family member 22##DQ893932|KIF22|3835|kinesin family member 22##DQ895829|KIF22|3835|kinesin family member 22##FJ532357|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)	0.0	
chr11	36171629	36171746	reg1018385.p2	7.559	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	-206076	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-487014	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-487237	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	139266	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	139299	-	NM_001160167 AK055042	146093	+	BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9##NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like	0.863443	CTCF.p2:7:0.863
chr1	157743607	157743760	reg1016883.p1	7.559	+	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	-73156	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	-175882	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	-221453	-	CU686705 AK301113 AY043465 AF459633 AY358130 AK303549 BC069185 NM_030764	3209	-	CU689698 AF329488 BC021274 AK315748 AK096690 BC033690 AF459634 AY043464 NM_001159397 NM_001159398 NM_052938	46202	-	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	67879	-	DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AK301113|FCRL2|79368|Fc receptor-like 2##AY043465|FCRL2|79368|Fc receptor-like 2##AF459633|FCRL2|79368|Fc receptor-like 2##AY358130|FCRL2|79368|Fc receptor-like 2##AK303549|FCRL2|79368|Fc receptor-like 2##BC069185|FCRL2|79368|Fc receptor-like 2##NM_030764|FCRL2|79368|Fc receptor-like 2##AF329488|FCRL1|115350|Fc receptor-like 1##BC021274|FCRL1|115350|Fc receptor-like 1##AK315748|FCRL1|115350|Fc receptor-like 1##AK096690|FCRL1|115350|Fc receptor-like 1##BC033690|FCRL1|115350|Fc receptor-like 1##AF459634|FCRL1|115350|Fc receptor-like 1##AY043464|FCRL1|115350|Fc receptor-like 1##NM_001159397|FCRL1|115350|Fc receptor-like 1##NM_001159398|FCRL1|115350|Fc receptor-like 1##NM_052938|FCRL1|115350|Fc receptor-like 1##DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like	0.056536	
chr11	77330746	77330899	reg1020087.p1	7.559	+	BC040443 NM_173039 TSC_hg19_v1_chr11_+_77300718 AB028147	-30122	+	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	-145990	-	TSC_hg19_v1_chr11_-_77122998 AK296006 AK055228	-207823	-	AB590787 AF026003 BT019907 AF005422 BC119634 BC119635 TSC_hg19_v1_chr11_-_77348840 U53454 AK315259 X91788 NM_001293	17992	-	AF380176 AB527448 TSC_hg19_v1_chr11_-_77531769 BC015360 NM_016578 AK098130	201010	-	TSC_hg19_v1_chr11_+_77532238 AF092136 AK024688 BC002752 NM_024684	201381	+	BC040443|AQP11|282679|aquaporin 11##NM_173039|AQP11|282679|aquaporin 11##AB028147|AQP11|282679|aquaporin 11##U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK296006|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK055228|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF380176|RSF1|51773|remodeling and spacing factor 1##BC015360|RSF1|51773|remodeling and spacing factor 1##NM_016578|RSF1|51773|remodeling and spacing factor 1##AF092136|C11orf67|28971|chromosome 11 open reading frame 67##AK024688|C11orf67|28971|chromosome 11 open reading frame 67##BC002752|C11orf67|28971|chromosome 11 open reading frame 67##NM_024684|C11orf67|28971|chromosome 11 open reading frame 67	0.999828	CTCF.p2:13:1.000
chr17	29543309	29543436	reg1016707.p2	7.559	+	TSC_hg19_v1_chr17_+_29421994 AK289936 M82814 M89914 BC144643 D42072	-121263	+	TSC_hg19_v1_chr17_+_29421944 D12625 NM_000267 NM_001042492 NM_001128147	-121428	+	TSC_hg19_v1_chr17_+_29298062 AK226030 BC082262 AK312979 AK122646 AK122709 AB470605 AY598332	-245232	+	X51694 BC018050 AK222663 AK312445 NM_002544	80942	-	AK312822 TSC_hg19_v1_chr17_-_29641073	97699	-	TSC_hg19_v1_chr17_-_29641092 BC005926	97717	-	AK289936|NF1|4763|neurofibromin 1##M82814|NF1|4763|neurofibromin 1##M89914|NF1|4763|neurofibromin 1##BC144643|NF1|4763|neurofibromin 1##D42072|NF1|4763|neurofibromin 1##D12625|NF1|4763|neurofibromin 1##NM_000267|NF1|4763|neurofibromin 1##NM_001042492|NF1|4763|neurofibromin 1##NM_001128147|NF1|4763|neurofibromin 1##AK226030|RNF135|84282|ring finger protein 135##BC082262|RNF135|84282|ring finger protein 135##AK312979|RNF135|84282|ring finger protein 135##AK122646|RNF135|84282|ring finger protein 135##AK122709|RNF135|84282|ring finger protein 135##AB470605|RNF135|84282|ring finger protein 135##AY598332|RNF135|84282|ring finger protein 135##X51694|OMG|4974|oligodendrocyte myelin glycoprotein##BC018050|OMG|4974|oligodendrocyte myelin glycoprotein##AK222663|OMG|4974|oligodendrocyte myelin glycoprotein##AK312445|OMG|4974|oligodendrocyte myelin glycoprotein##NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein##AK312822|EVI2B|2124|ecotropic viral integration site 2B##BC005926|EVI2B|2124|ecotropic viral integration site 2B	0.999601	CTCF.p2:-9:1.000
chr2	127954633	127954760	reg1020535.p1	7.559	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	-89955	-	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-540904	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-540989	+	BC039307 NM_001001665	8646	-	AK131190 TSC_hg19_v1_chr2_-_127977781	23021	-	AK091500 CU679129 DQ893802 EU176179 AB384812 AK095557 AK290474 AK309405 TSC_hg19_v1_chr2_-_128051698	96981	-	AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK091500|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##DQ893802|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##EU176179|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK095557|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK290474|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK309405|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)	0.80104	CTCF.p2:-4:0.801
chr7	149119534	149119656	reg1014317.p1	7.559	+	AK098351 AK310453 AK310396 TSC_hg19_v1_chr7_+_148982401 AK303492	-137209	+	TSC_hg19_v1_chr7_+_148959286 AK131504 NM_001195220 BC131569 AB528912	-160275	+	TSC_hg19_v1_chr7_+_148936741 AK074821 NM_012256 BC022785 EU446738 CU692712	-182801	+	TSC_hg19_v1_chr7_-_149157908 AB033111 NM_015694	38364	-	TSC_hg19_v1_chr7_-_149194795 BC068505 BC035586	75190	-	TSC_hg19_v1_chr7_-_149194830 AK291814	75245	-	AK098351|LOC155060|155060|AI894139 pseudogene##AK310453|LOC155060|155060|AI894139 pseudogene##AK310396|LOC155060|155060|AI894139 pseudogene##AK303492|LOC155060|155060|AI894139 pseudogene##NM_001195220|ZNF783|100289678|zinc finger family member 783##AK074821|ZNF212|7988|zinc finger protein 212##NM_012256|ZNF212|7988|zinc finger protein 212##BC022785|ZNF212|7988|zinc finger protein 212##EU446738|ZNF212|7988|zinc finger protein 212##AB033111|ZNF777|27153|zinc finger protein 777##NM_015694|ZNF777|27153|zinc finger protein 777##BC068505|ZNF746|155061|zinc finger protein 746##BC035586|ZNF746|155061|zinc finger protein 746##AK291814|ZNF746|155061|zinc finger protein 746	1.867207	CTCF.p2:7:0.998	CTCF.p2:-35:0.771
chr1	241649136	241649261	reg1020226.p1	7.558	+	TSC_hg19_v1_chr1_-_241520469 BC022009 NM_002924	-128726	-	AF090116 AK314862 TSC_hg19_v1_chr1_-_241520451	-128780	-	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	-873744	-	TSC_hg19_v1_chr1_-_241683023 BT009839 AB590519 EU176358 BC017444 BC003108 U48857 U59309	33834	-	AK312415 TSC_hg19_v1_chr1_-_241683076 NM_000143	33882	-	NM_003679 AK310937 BC005297 AK291558 AF056032 Y13153 CU675097	46389	+	BC022009|RGS7|6000|regulator of G-protein signaling 7##NM_002924|RGS7|6000|regulator of G-protein signaling 7##AF090116|RGS7|6000|regulator of G-protein signaling 7##AK314862|RGS7|6000|regulator of G-protein signaling 7##AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2##BT009839|FH|2271|fumarate hydratase##EU176358|FH|2271|fumarate hydratase##BC017444|FH|2271|fumarate hydratase##BC003108|FH|2271|fumarate hydratase##U48857|FH|2271|fumarate hydratase##U59309|FH|2271|fumarate hydratase##AK312415|FH|2271|fumarate hydratase##NM_000143|FH|2271|fumarate hydratase##NM_003679|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AK310937|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##BC005297|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AK291558|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AF056032|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##Y13153|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	0.998128	CTCF.p2:4:0.998
chr2	62020569	62020665	reg1014956.p1	7.558	+	TSC_hg19_v1_chr2_-_61765394 BX647758 NM_003400	-255212	-	TSC_hg19_v1_chr2_-_61765383 BC032847 CR749840	-255238	-	TSC_hg19_v1_chr2_-_61765358 AL833550	-255262	-	BC107162 BC107163 AK310908 AB527366 AM392542 AM392832 AM393518 TSC_hg19_v1_chr2_-_62081180 BX648834 BX649029 AK023367 BC036448 NM_001201543 NM_032180	60546	-	U38846 EU446763 AB385091 TSC_hg19_v1_chr2_-_62115685 AK294665	95047	-	AK129860 TSC_hg19_v1_chr2_-_62115719 AK295330	95101	-	BX647758|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##NM_003400|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC032847|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##CR749840|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##AL833550|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC107162|FAM161A|84140|family with sequence similarity 161, member A##BC107163|FAM161A|84140|family with sequence similarity 161, member A##AK310908|FAM161A|84140|family with sequence similarity 161, member A##AM392542|FAM161A|84140|family with sequence similarity 161, member A##AM392832|FAM161A|84140|family with sequence similarity 161, member A##AM393518|FAM161A|84140|family with sequence similarity 161, member A##BX648834|FAM161A|84140|family with sequence similarity 161, member A##BX649029|FAM161A|84140|family with sequence similarity 161, member A##AK023367|FAM161A|84140|family with sequence similarity 161, member A##BC036448|FAM161A|84140|family with sequence similarity 161, member A##NM_001201543|FAM161A|84140|family with sequence similarity 161, member A##NM_032180|FAM161A|84140|family with sequence similarity 161, member A##U38846|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##EU446763|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK294665|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK129860|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK295330|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)	0.995275	CTCF.p2:-4:0.995
chr4	83383660	83383777	reg1020443.p1	7.558	+	TSC_hg19_v1_chr4_+_83351969 AB528563 CR457141	-31749	+	TSC_hg19_v1_chr4_+_83351769 AK022656 BC065815 BC001317	-31929	+	NM_021204 TSC_hg19_v1_chr4_+_83351763 AF087881 AF113125	-31974	+	AK301116 BC147019 BC147027 NM_001080506 AK297512	99396	-	TSC_hg19_v1_chr4_-_83719926 BC004936 BC137429 BC137432 AF389338 AK024685 NM_001037582 NM_024906	336271	-	TSC_hg19_v1_chr4_-_83812296 BC084583 AB018358 AB018359 BC031292 AK225934 BC143489 BC117221 BC143491 BC143492	428567	-	CR457141|ENOPH1|58478|enolase-phosphatase 1##AK022656|ENOPH1|58478|enolase-phosphatase 1##BC065815|ENOPH1|58478|enolase-phosphatase 1##BC001317|ENOPH1|58478|enolase-phosphatase 1##NM_021204|ENOPH1|58478|enolase-phosphatase 1##AF087881|ENOPH1|58478|enolase-phosphatase 1##AF113125|ENOPH1|58478|enolase-phosphatase 1##AK301116|TMEM150C|441027|transmembrane protein 150C##BC147019|TMEM150C|441027|transmembrane protein 150C##BC147027|TMEM150C|441027|transmembrane protein 150C##NM_001080506|TMEM150C|441027|transmembrane protein 150C##AK297512|TMEM150C|441027|transmembrane protein 150C##BC004936|SCD5|79966|stearoyl-CoA desaturase 5##BC137429|SCD5|79966|stearoyl-CoA desaturase 5##BC137432|SCD5|79966|stearoyl-CoA desaturase 5##AF389338|SCD5|79966|stearoyl-CoA desaturase 5##AK024685|SCD5|79966|stearoyl-CoA desaturase 5##NM_001037582|SCD5|79966|stearoyl-CoA desaturase 5##NM_024906|SCD5|79966|stearoyl-CoA desaturase 5##BC084583|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AB018358|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AB018359|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC031292|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK225934|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143489|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC117221|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143491|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143492|SEC31A|22872|SEC31 homolog A (S. cerevisiae)	0.972708	CTCF.p2:17:0.973
chr5	136411006	136411105	reg1017985.p1	7.558	+	NM_001167576 NM_001167577 NM_020389	-709892	-	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-942471	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-942526	+	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	423186	-	TSC_hg19_v1_chr5_-_136834420 AK094489	423372	-	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	423925	-	NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.635948	CTCF.p2:6:0.636
chr5	68389589	68389720	reg1015545.p1	7.557	+	AK094785 NM_001242466 AK294919	-801202	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-803108	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-805360	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	149	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	228	+	AK292925 TSC_hg19_v1_chr5_+_68389913	259	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.173676	
chr6	139551745	139551865	reg1018863.p1	7.557	+	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	-95549	+	TSC_hg19_v1_chr6_+_139349935 AK309402 AF116682 BC014953	-201887	+	NM_021243 AF161398 TSC_hg19_v1_chr6_+_139349850	-201968	+	TSC_hg19_v1_chr6_-_139613136 BX647633 AL834248 AL831988 AK314725 BX647477 BC115383 BC115384 AB085905 NM_153235	61355	-	NM_001168389 NM_001168388	143618	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	143956	-	BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)##AF116682|C6orf115|58527|chromosome 6 open reading frame 115##BC014953|C6orf115|58527|chromosome 6 open reading frame 115##NM_021243|C6orf115|58527|chromosome 6 open reading frame 115##AF161398|C6orf115|58527|chromosome 6 open reading frame 115##BX647633|TXLNB|167838|taxilin beta##AL834248|TXLNB|167838|taxilin beta##AL831988|TXLNB|167838|taxilin beta##AK314725|TXLNB|167838|taxilin beta##BX647477|TXLNB|167838|taxilin beta##BC115383|TXLNB|167838|taxilin beta##BC115384|TXLNB|167838|taxilin beta##AB085905|TXLNB|167838|taxilin beta##NM_153235|TXLNB|167838|taxilin beta##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	0.013387	
chrX	153803467	153803586	reg1018887.p1	7.557	+	AF261086 NM_003639 AF091453	-27429	+	BC000299 TSC_hg19_v1_chrX_+_153775876 AK000593 BC046922 AF062089	-27657	+	BC050612 TSC_hg19_v1_chrX_+_153775834	-27695	+	NM_001327 NM_139250 U87459 BC130362 BC130364 AJ003149 AJ275978	9956	+	AJ275978 AJ003149 BC130362 BC130364 NM_001327 NM_139250 U87459	43929	-	AJ012833 AM393026 AM393495 AM393696 AM393839 AB463462 BC002833 BC113998 BC114933 BC128045 AJ223041 AY679088 AY679089 AJ012834 AJ012835 AJ223040 NM_020994 NM_172377	78278	-	AF261086|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##NM_003639|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AF091453|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC000299|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AK000593|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC046922|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AF062089|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC050612|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##AJ012833|CTAG2|30848|cancer/testis antigen 2##AM393026|CTAG2|30848|cancer/testis antigen 2##AM393495|CTAG2|30848|cancer/testis antigen 2##AM393696|CTAG2|30848|cancer/testis antigen 2##AM393839|CTAG2|30848|cancer/testis antigen 2##BC002833|CTAG2|30848|cancer/testis antigen 2##BC113998|CTAG2|30848|cancer/testis antigen 2##BC114933|CTAG2|30848|cancer/testis antigen 2##BC128045|CTAG2|30848|cancer/testis antigen 2##AJ223041|CTAG2|30848|cancer/testis antigen 2##AY679088|CTAG2|30848|cancer/testis antigen 2##AY679089|CTAG2|30848|cancer/testis antigen 2##AJ012834|CTAG2|30848|cancer/testis antigen 2##AJ012835|CTAG2|30848|cancer/testis antigen 2##AJ223040|CTAG2|30848|cancer/testis antigen 2##NM_020994|CTAG2|30848|cancer/testis antigen 2##NM_172377|CTAG2|30848|cancer/testis antigen 2	0.857087	CTCF.p2:-3:0.857
chr12	25363966	25364091	reg1018792.p1	7.556	+	AK094491 TSC_hg19_v1_chr12_+_25348215 BC100276 BC071769	-15822	+	TSC_hg19_v1_chr12_+_25348156 AK057730 NM_001001660	-15877	+	BC028415 AK297998 AK302235 AK301763 AK093102 AX747924 BC031047 BC047415 BC057795 NM_001082972 NM_001082973 NM_001204101 NM_001204102 NM_018272 AK304602	-15965	-	TSC_hg19_v1_chr12_-_25403822 BC013572	39787	-	TSC_hg19_v1_chr12_-_25403864 AK292510 NM_004985 NM_033360 BC029545 M54968	39913	-	AK093323 AX748055 NM_152590 BC037957 AK310411 AK302292 NM_001145728 NM_001145729	342168	-	BC100276|LYRM5|144363|LYR motif containing 5##BC071769|LYRM5|144363|LYR motif containing 5##AK057730|LYRM5|144363|LYR motif containing 5##NM_001001660|LYRM5|144363|LYR motif containing 5##BC028415|CASC1|55259|cancer susceptibility candidate 1##AK297998|CASC1|55259|cancer susceptibility candidate 1##AK302235|CASC1|55259|cancer susceptibility candidate 1##AK301763|CASC1|55259|cancer susceptibility candidate 1##AK093102|CASC1|55259|cancer susceptibility candidate 1##BC031047|CASC1|55259|cancer susceptibility candidate 1##BC047415|CASC1|55259|cancer susceptibility candidate 1##BC057795|CASC1|55259|cancer susceptibility candidate 1##NM_001082972|CASC1|55259|cancer susceptibility candidate 1##NM_001082973|CASC1|55259|cancer susceptibility candidate 1##NM_001204101|CASC1|55259|cancer susceptibility candidate 1##NM_001204102|CASC1|55259|cancer susceptibility candidate 1##NM_018272|CASC1|55259|cancer susceptibility candidate 1##AK304602|CASC1|55259|cancer susceptibility candidate 1##BC013572|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##AK292510|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##NM_004985|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##NM_033360|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC029545|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##M54968|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##AK093323|IFLTD1|160492|intermediate filament tail domain containing 1##NM_152590|IFLTD1|160492|intermediate filament tail domain containing 1##BC037957|IFLTD1|160492|intermediate filament tail domain containing 1##AK310411|IFLTD1|160492|intermediate filament tail domain containing 1##AK302292|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145728|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145729|IFLTD1|160492|intermediate filament tail domain containing 1	0.03039	
chr2	178848071	178848186	reg1017751.p1	7.556	+	AF281865 NM_001077358	-60586	-	AJ251509 NM_001077196	-94664	-	AK292395 BC042848 NM_152275	-364443	-	BC112393 BC114431 AB036704 NM_016953 TSC_hg19_v1_chr2_-_178937505 AK309155	89380	-	AB038041 NM_001077197	124937	-	AF526533 BC037837 BC066549 NM_152945 TSC_hg19_v1_chr2_+_178977198 AK126575 AB036991 CU688160	129083	+	AF281865|PDE11A|50940|phosphodiesterase 11A##NM_001077358|PDE11A|50940|phosphodiesterase 11A##AJ251509|PDE11A|50940|phosphodiesterase 11A##NM_001077196|PDE11A|50940|phosphodiesterase 11A##AK292395|TTC30A|92104|tetratricopeptide repeat domain 30A##BC042848|TTC30A|92104|tetratricopeptide repeat domain 30A##NM_152275|TTC30A|92104|tetratricopeptide repeat domain 30A##BC112393|PDE11A|50940|phosphodiesterase 11A##BC114431|PDE11A|50940|phosphodiesterase 11A##AB036704|PDE11A|50940|phosphodiesterase 11A##NM_016953|PDE11A|50940|phosphodiesterase 11A##AB038041|PDE11A|50940|phosphodiesterase 11A##NM_001077197|PDE11A|50940|phosphodiesterase 11A##AF526533|RBM45|129831|RNA binding motif protein 45##BC037837|RBM45|129831|RNA binding motif protein 45##BC066549|RBM45|129831|RNA binding motif protein 45##NM_152945|RBM45|129831|RNA binding motif protein 45##AK126575|RBM45|129831|RNA binding motif protein 45##AB036991|RBM45|129831|RNA binding motif protein 45	0.562879	CTCF.p2:-15:0.563
chr3	175659361	175659471	reg1017356.p2	7.556	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	-1082326	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	-1500696	+	BC032555 NM_014932	-2543173	+	TSC_hg19_v1_chr3_-_176914267 BX648935	1254834	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	1255535	-	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	1255643	-	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.982624	CTCF.p2:5:0.983
chr7	77281009	77281119	reg1017210.p1	7.556	+	AK303602 NM_001131008 NM_001131009 AK296764	-113696	+	TSC_hg19_v1_chr7_+_77166764 NM_002835 AB209524 AK314236 AK289573 M93425 D13380 AB384966	-114258	+	TSC_hg19_v1_chr7_+_77166392 BC050008	-114686	+	TSC_hg19_v1_chr7_-_77325573 BC037783	44497	-	TSC_hg19_v1_chr7_+_77325775 NM_198467 BC059402 BC046353	44693	+	BC012192 TSC_hg19_v1_chr7_-_77427680 BC065930	146604	-	AK303602|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_001131008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_001131009|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK296764|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_002835|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AB209524|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK314236|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK289573|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##M93425|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##D13380|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##BC050008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_198467|RSBN1L|222194|round spermatid basic protein 1-like##BC059402|RSBN1L|222194|round spermatid basic protein 1-like##BC046353|RSBN1L|222194|round spermatid basic protein 1-like##BC012192|TMEM60|85025|transmembrane protein 60##BC065930|TMEM60|85025|transmembrane protein 60	0.998275	CTCF.p2:-2:0.998
chr9	139294686	139294813	reg1016655.p1	7.556	+	NM_003086	-1861	-	BC035805 TSC_hg19_v1_chr9_-_139268130 BC008877 AK024001 NM_052813 NM_052814	-26622	-	AF311287 AK292081 TSC_hg19_v1_chr9_-_139268093 AK295647 BC070091 AK309043	-26658	-	TSC_hg19_v1_chr9_-_139304915 BC014515	10167	-	TSC_hg19_v1_chr9_-_139305058 NM_001039707 NM_001039708 NM_006643	10306	-	TSC_hg19_v1_chr9_+_139305083 BC132724 BC136599	10331	+	NM_003086|SNAPC4|6621|small nuclear RNA activating complex, polypeptide 4, 190kDa##BC035805|CARD9|64170|caspase recruitment domain family, member 9##BC008877|CARD9|64170|caspase recruitment domain family, member 9##AK024001|CARD9|64170|caspase recruitment domain family, member 9##NM_052813|CARD9|64170|caspase recruitment domain family, member 9##NM_052814|CARD9|64170|caspase recruitment domain family, member 9##AF311287|CARD9|64170|caspase recruitment domain family, member 9##AK292081|CARD9|64170|caspase recruitment domain family, member 9##AK295647|CARD9|64170|caspase recruitment domain family, member 9##AK309043|CARD9|64170|caspase recruitment domain family, member 9##BC014515|SDCCAG3|10807|serologically defined colon cancer antigen 3##NM_001039707|SDCCAG3|10807|serologically defined colon cancer antigen 3##NM_001039708|SDCCAG3|10807|serologically defined colon cancer antigen 3##NM_006643|SDCCAG3|10807|serologically defined colon cancer antigen 3##BC132724|PMPCA|23203|peptidase (mitochondrial processing) alpha##BC136599|PMPCA|23203|peptidase (mitochondrial processing) alpha	0.053165	
chr5	75840264	75840394	reg1018847.p1	7.555	+	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	-141213	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-461058	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-827069	-	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	78816	-	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	171627	+	NM_005242 BC018130 TSC_hg19_v1_chr5_+_76114854 U34038	274523	+	AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor##NM_005242|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC018130|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##U34038|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1	0.798064	CTCF.p2:3:0.798
chr13	25807227	25807372	reg1017910.p1	7.554	+	AK055049 BC041392 TSC_hg19_v1_chr13_-_25746427	-60934	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	-61482	-	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	-61639	-	AB384771 AF406619 AM392681 AM392837 CU691804 TSC_hg19_v1_chr13_-_25861510	54149	-	AK314587 TSC_hg19_v1_chr13_-_25861584 BC040012	54276	-	TSC_hg19_v1_chr13_-_25861621 AL832017 AK093237 AX748005 NM_004685	54356	-	AK055049|FAM123A|219287|family with sequence similarity 123A##BC041392|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##AF406619|MTMR6|9107|myotubularin related protein 6##AM392681|MTMR6|9107|myotubularin related protein 6##AM392837|MTMR6|9107|myotubularin related protein 6##AK314587|MTMR6|9107|myotubularin related protein 6##BC040012|MTMR6|9107|myotubularin related protein 6##AL832017|MTMR6|9107|myotubularin related protein 6##AK093237|MTMR6|9107|myotubularin related protein 6##NM_004685|MTMR6|9107|myotubularin related protein 6	0.997574	CTCF.p2:-17:0.998
chr6	168968	169119	reg1018138.p1	7.554	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	123042	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	123454	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	222721	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.870077	CTCF.p2:26:0.870
chr8	84312782	84312902	reg1014166.p1	7.554	+	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	-1558369	-	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-1668083	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-1679316	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	782617	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	782701	+	TSC_hg19_v1_chr8_+_85095702 AK095026	782893	+	AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like	0.752921	CTCF.p2:-10:0.753
chr10	39070727	39070830	reg1017298.p1	7.553	+	TSC_hg19_v1_chr10_-_38691741 BC171738 BC042387 BC048143	-379022	-	AK295332 AY829267 AF165514 AF165517 BC071987 TSC_hg19_v1_chr10_+_38645320 AK293968 AK307174 CU687208	-425441	+	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	-687495	+	TSC_hg19_v1_chr10_-_42863441 AF519622 AK131313	3792685	-	AX721135 TSC_hg19_v1_chr10_-_43048257 AK308832 AK026980 BC045697 AX721116	3977424	-	TSC_hg19_v1_chr10_-_43134018 BC109232 BC160932 BC065181 BC107726 BC048313 AJ491697 NM_006955 AK096683 AK309564 AK304306 BC036398	4063220	-	BC171738|SEPT7L|285961|septin 7-like##BC042387|SEPT7L|285961|septin 7-like##BC048143|SEPT7L|285961|septin 7-like##AK295332|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AY829267|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165514|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165517|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC071987|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK293968|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK307174|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A##AF519622|LOC441666|441666|zinc finger protein 91 pseudogene##AK308832|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##AK026980|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC045697|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC109232|ZNF33B|7582|zinc finger protein 33B##BC160932|ZNF33B|7582|zinc finger protein 33B##BC065181|ZNF33B|7582|zinc finger protein 33B##BC107726|ZNF33B|7582|zinc finger protein 33B##BC048313|ZNF33B|7582|zinc finger protein 33B##AJ491697|ZNF33B|7582|zinc finger protein 33B##NM_006955|ZNF33B|7582|zinc finger protein 33B##AK096683|ZNF33B|7582|zinc finger protein 33B##AK309564|ZNF33B|7582|zinc finger protein 33B##AK304306|ZNF33B|7582|zinc finger protein 33B##BC036398|ZNF33B|7582|zinc finger protein 33B	0.604722	CTCF.p2:36:0.605
chr11	119612109	119612226	reg1018036.p1	7.553	+	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	-12785	-	BC037832 NM_006288	-317924	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-318258	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	387379	-	AK299472 TSC_hg19_v1_chr11_-_120008323	396105	-	AB464321 CU675956 EU446943 TSC_hg19_v1_chr11_-_120008772	396588	-	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29##EU446943|TRIM29|23650|tripartite motif containing 29	1.026835	CTCF.p2:7:0.992
chr14	21535225	21535333	reg1020770.p1	7.553	+	BC137537 BC137538 NM_138331	-9264	+	AK292697 NM_032572 AY170392 AJ306608 AJ306609 AJ306610 AY359097 BC112334	-24814	+	BC044831 NM_001012264	-32336	-	TSC_hg19_v1_chr14_+_21538418 BX248768 BC144317 AK074057 BC142692 BC151212 AK126755 NM_018071	3155	+	BC036105 TSC_hg19_v1_chr14_-_21566504	31223	-	TSC_hg19_v1_chr14_-_21566815 AB015427 NM_016423	31539	-	BC137537|RNASE8|122665|ribonuclease, RNase A family, 8##BC137538|RNASE8|122665|ribonuclease, RNase A family, 8##NM_138331|RNASE8|122665|ribonuclease, RNase A family, 8##AK292697|RNASE7|84659|ribonuclease, RNase A family, 7##NM_032572|RNASE7|84659|ribonuclease, RNase A family, 7##AY170392|RNASE7|84659|ribonuclease, RNase A family, 7##AJ306608|RNASE7|84659|ribonuclease, RNase A family, 7##AJ306609|RNASE7|84659|ribonuclease, RNase A family, 7##AJ306610|RNASE7|84659|ribonuclease, RNase A family, 7##AY359097|RNASE7|84659|ribonuclease, RNase A family, 7##BC112334|RNASE7|84659|ribonuclease, RNase A family, 7##BC044831|RNASE13|440163|ribonuclease, RNase A family, 13 (non-active)##NM_001012264|RNASE13|440163|ribonuclease, RNase A family, 13 (non-active)##BX248768|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC144317|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##AK074057|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC142692|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC151212|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##AK126755|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##NM_018071|ARHGEF40|55701|Rho guanine nucleotide exchange factor (GEF) 40##BC036105|ZNF219|51222|zinc finger protein 219##AB015427|ZNF219|51222|zinc finger protein 219##NM_016423|ZNF219|51222|zinc finger protein 219	0.381534	CTCF.p2:-12:0.382
chr2	60901825	60901953	reg1020867.p1	7.553	+	AF080216 TSC_hg19_v1_chr2_-_60780784	-121111	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	-121367	-	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2433407	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	81595	+	TSC_hg19_v1_chr2_+_61108702 AK303926	206816	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	206848	+	AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)	0.999951	CTCF.p2:-6:1.000
chr11	63688678	63688807	reg1019821.p1	7.552	+	TSC_hg19_v1_chr11_-_63684632 AB593132	-4103	-	BC023587 NM_173587	-4427	-	NM_017490 AK290339 TSC_hg19_v1_chr11_+_63656059 X97630 AY562188	-32666	+	TSC_hg19_v1_chr11_+_63706473 NM_024771 AK023910 AK300451 AK303557 JF263566 BC041617 BC052298	17742	+	TSC_hg19_v1_chr11_+_63742069 BC063025 NM_004074 BC000501 AK311934 BT009803 CR407687	53341	+	AK098029 NM_017670	64582	+	AB593132|RCOR2|283248|REST corepressor 2##BC023587|RCOR2|283248|REST corepressor 2##NM_173587|RCOR2|283248|REST corepressor 2##NM_017490|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK290339|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##X97630|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AY562188|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##JF263566|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC063025|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##NM_004074|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##BC000501|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##AK311934|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##BT009803|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##CR407687|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##AK098029|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##NM_017670|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	1.04254	CTCF.p2:17:0.983
chr1	246656072	246656182	reg1016506.p1	7.552	+	AK024733 NM_022743	-75416	-	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-1337819	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-1522444	+	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	14427	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	14481	-	TSC_hg19_v1_chr1_-_246670632 NM_001167740	14510	-	AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3##NM_001167740|SMYD3|64754|SET and MYND domain containing 3	0.881922	CTCF.p2:0:0.882
chr13	96146458	96146613	reg1019603.p2	7.552	+	NM_001160100 NM_182848 AK055855	-60681	+	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	-192823	-	X65666 X71136 AB464716 NM_007084	-782217	-	TSC_hg19_v1_chr13_+_96204946 NM_006984 BC010920 U89916 AK315737 DQ892831 DQ896077 CR456845	58439	+	AB385415 AF272347 AF272348 TSC_hg19_v1_chr13_-_96294398	147808	-	BC011450 AB023213 TSC_hg19_v1_chr13_-_96296961 BC041804 NM_014934 NM_198968	150405	-	NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##NM_006984|CLDN10|9071|claudin 10##BC010920|CLDN10|9071|claudin 10##U89916|CLDN10|9071|claudin 10##AK315737|CLDN10|9071|claudin 10##DQ892831|CLDN10|9071|claudin 10##DQ896077|CLDN10|9071|claudin 10##CR456845|CLDN10|9071|claudin 10##AF272347|DZIP1|22873|DAZ interacting protein 1##AF272348|DZIP1|22873|DAZ interacting protein 1##BC011450|DZIP1|22873|DAZ interacting protein 1##AB023213|DZIP1|22873|DAZ interacting protein 1##BC041804|DZIP1|22873|DAZ interacting protein 1##NM_014934|DZIP1|22873|DAZ interacting protein 1##NM_198968|DZIP1|22873|DAZ interacting protein 1	0.877096	CTCF.p2:-3:0.877
chr2	71089102	71089204	reg1016517.p1	7.552	+	CU692528 DQ891964 DQ895154 AK314927 BC022278 AJ242859 NM_015717	-26225	-	BC139723 BC144652 AK096429 AK301242 NM_173535	-41449	-	BC039536 AB463644 AY541030 NM_001004311	-71401	-	TSC_hg19_v1_chr2_+_71127705 AB593145	38550	+	TSC_hg19_v1_chr2_+_71127724 NM_012476 Y17791	38566	+	TSC_hg19_v1_chr2_+_71127738 BC006336 AB527952 BT007035	38585	+	DQ891964|CD207|50489|CD207 molecule, langerin##DQ895154|CD207|50489|CD207 molecule, langerin##AK314927|CD207|50489|CD207 molecule, langerin##BC022278|CD207|50489|CD207 molecule, langerin##AJ242859|CD207|50489|CD207 molecule, langerin##NM_015717|CD207|50489|CD207 molecule, langerin##BC139723|CLEC4F|165530|C-type lectin domain family 4, member F##BC144652|CLEC4F|165530|C-type lectin domain family 4, member F##AK096429|CLEC4F|165530|C-type lectin domain family 4, member F##AK301242|CLEC4F|165530|C-type lectin domain family 4, member F##NM_173535|CLEC4F|165530|C-type lectin domain family 4, member F##BC039536|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##AY541030|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##NM_001004311|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##AB593145|VAX2|25806|ventral anterior homeobox 2##NM_012476|VAX2|25806|ventral anterior homeobox 2##Y17791|VAX2|25806|ventral anterior homeobox 2##BC006336|VAX2|25806|ventral anterior homeobox 2##BT007035|VAX2|25806|ventral anterior homeobox 2	1.040581	CTCF.p2:0:0.997
chr8	1978849	1978964	reg1017530.p1	7.552	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-25998	+	TSC_hg19_v1_chr8_+_1950340 BC169332	-28554	+	TSC_hg19_v1_chr8_+_1949299 AY762229	-29656	+	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	14296	+	AK128880 TSC_hg19_v1_chr8_-_2585966	607076	-	AY017307 TSC_hg19_v1_chr8_-_4852228	2873319	-	AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##BC169332|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY762229|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1	0.924227	CTCF.p2:8:0.924
chr8	6921162	6921279	reg1020121.p1	7.552	+	BC107079 BC069690 NM_021010	-6966	-	BC093791 BC112188 BC069423 M21130 M23281 BC119706 X52053 BC027917 M26602 NM_005217 X13621 NM_001042500 NM_004084	-45421	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	-64520	-	NM_001164452 NM_001164456	193205	+	NM_001164452 NM_001164456	216071	+	NM_001164455	223693	+	BC107079|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC069690|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##NM_021010|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M23281|DEFA3|1668|defensin, alpha 3, neutrophil-specific##BC119706|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X52053|DEFA1|1667|defensin, alpha 1##BC027917|DEFA3|1668|defensin, alpha 3, neutrophil-specific##M26602|DEFA1|1667|defensin, alpha 1##NM_005217|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X13621|DEFA3|1668|defensin, alpha 3, neutrophil-specific##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164455|FAM90A5|441315|family with sequence similarity 90, member A5	0.752868	CTCF.p2:-14:0.753
chr16	81238795	81238909	reg1017523.p2	7.551	+	BT009827 CR457072 AK311978 M69175 BC000790 BC009065 BC020922 TSC_hg19_v1_chr16_-_81130001 D00723 NM_004483	-108899	-	AK057264 AK295411 BC064143 NM_001100873 NM_152337	-128015	-	TSC_hg19_v1_chr16_+_81069446 AX775771 NM_015251 BC002701 AK290943	-169339	+	AY164483 NM_001076780 NM_052892	15122	-	AK296011 AF294900 AK001592 BC022269 NM_017429 BC126210 BC126212 HQ258298	33551	+	TSC_hg19_v1_chr16_+_81348566 AK095378 NM_022041 AF291673	109717	+	BT009827|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##CR457072|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##AK311978|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##M69175|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##BC000790|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##BC009065|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##BC020922|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##D00723|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##NM_004483|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##AK057264|C16orf46|123775|chromosome 16 open reading frame 46##AK295411|C16orf46|123775|chromosome 16 open reading frame 46##BC064143|C16orf46|123775|chromosome 16 open reading frame 46##NM_001100873|C16orf46|123775|chromosome 16 open reading frame 46##NM_152337|C16orf46|123775|chromosome 16 open reading frame 46##NM_015251|ATMIN|23300|ATM interactor##BC002701|ATMIN|23300|ATM interactor##AK290943|ATMIN|23300|ATM interactor##AY164483|PKD1L2|114780|polycystic kidney disease 1-like 2##NM_001076780|PKD1L2|114780|polycystic kidney disease 1-like 2##NM_052892|PKD1L2|114780|polycystic kidney disease 1-like 2##AK296011|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##AF294900|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##AK001592|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC022269|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##NM_017429|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC126210|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC126212|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##HQ258298|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##AK095378|GAN|8139|gigaxonin##NM_022041|GAN|8139|gigaxonin##AF291673|GAN|8139|gigaxonin	0.998888	CTCF.p2:7:0.999
chr2	108832274	108832379	reg1016644.p1	7.551	+	AK315280 AB084377 AK300801 AB043997 NM_021815 BC111525 BC111524	-229324	+	NM_182588 TSC_hg19_v1_chr2_+_108443399	-388932	+	TSC_hg19_v1_chr2_-_107503517 AX795200 AB059555 BC008680 AK307784 NM_001142352 NM_032528 FJ433883	-1328780	-	AB528243 NM_001008743	31324	+	AF186252 AF186255 NM_001056 NM_176825 AF186251 AF186254 AK297086 AK313193 AK298306 U66036 AF186253 AF186256 AB008164 AF026303 BC005353	72959	+	BC058861 NM_006588 AK298755 AF055584 AK297851 BC125043	162177	+	AK315280|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB084377|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AK300801|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB043997|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_021815|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111525|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111524|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_182588|RGPD4|285190|RANBP2-like and GRIP domain containing 4##AB059555|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##BC008680|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##AK307784|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142352|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_032528|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3##AF186252|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186255|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001056|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_176825|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186251|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186254|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK297086|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK313193|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK298306|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##U66036|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186253|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186256|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AB008164|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF026303|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC005353|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC058861|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##NM_006588|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK298755|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK297851|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##BC125043|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4	0.221553	CTCF.p2:-8:0.222
chr9	86264150	86264251	reg1017812.p1	7.551	+	BC142991 BC036421 BC045782 TSC_hg19_v1_chr9_+_86238057 NM_001001551 NM_001190727 AY615889	-26220	+	AK094281 EF560742 TSC_hg19_v1_chr9_-_86153270 AK297722 AK223597 NM_001244959 NM_174938 BC041376	-110995	-	NM_001244960 AY137774	-181541	-	AF176069 AF293384 AB528730 TSC_hg19_v1_chr9_-_86322601	58400	-	TSC_hg19_v1_chr9_-_86322844 BC010066	58647	-	TSC_hg19_v1_chr9_-_86322860 AK027576 BC017289 BC039294	58657	-	BC142991|C9orf103|414328|chromosome 9 open reading frame 103##BC036421|C9orf103|414328|chromosome 9 open reading frame 103##BC045782|C9orf103|414328|chromosome 9 open reading frame 103##NM_001001551|C9orf103|414328|chromosome 9 open reading frame 103##NM_001190727|C9orf103|414328|chromosome 9 open reading frame 103##AY615889|C9orf103|414328|chromosome 9 open reading frame 103##AK094281|FRMD3|257019|FERM domain containing 3##EF560742|FRMD3|257019|FERM domain containing 3##AK297722|FRMD3|257019|FERM domain containing 3##AK223597|FRMD3|257019|FERM domain containing 3##NM_001244959|FRMD3|257019|FERM domain containing 3##NM_174938|FRMD3|257019|FERM domain containing 3##BC041376|FRMD3|257019|FERM domain containing 3##NM_001244960|FRMD3|257019|FERM domain containing 3##AY137774|FRMD3|257019|FERM domain containing 3##AF176069|UBQLN1|29979|ubiquilin 1##AF293384|UBQLN1|29979|ubiquilin 1##BC010066|UBQLN1|29979|ubiquilin 1##AK027576|UBQLN1|29979|ubiquilin 1##BC039294|UBQLN1|29979|ubiquilin 1	0.999935	CTCF.p2:17:1.000
chr14	68303873	68303989	reg1017980.p2	7.550	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-17411	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-20632	-	AK315462 NM_152443	-135329	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	955789	-	NM_001244698 NM_004926	956699	-	NM_001244701 AB528867	959053	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.998289	CTCF.p2:1:0.958
chr20	937021	937201	reg1000075.p1	7.550	+	AB527108 AF113708 BC111976 BC111978 AF074332 NM_015985 AK304756	-40195	-	NM_031424 BC022238 AB196290 DQ431181	-111746	+	BC004222 NM_207121	-120401	+	AB528812 AK122609 DQ355152 NM_001029871 NM_001040007 TSC_hg19_v1_chr20_-_983029	45806	-	AK302164 NM_178578 BC126127 BC126462	156849	+	TSC_hg19_v1_chr20_+_1099244 NM_006814 AK098612 AK294134 D88378 AB590890 HQ258165 AK300667	162242	+	AF113708|ANGPT4|51378|angiopoietin 4##BC111976|ANGPT4|51378|angiopoietin 4##BC111978|ANGPT4|51378|angiopoietin 4##AF074332|ANGPT4|51378|angiopoietin 4##NM_015985|ANGPT4|51378|angiopoietin 4##AK304756|ANGPT4|51378|angiopoietin 4##NM_031424|FAM110A|83541|family with sequence similarity 110, member A##BC022238|FAM110A|83541|family with sequence similarity 110, member A##AB196290|FAM110A|83541|family with sequence similarity 110, member A##DQ431181|FAM110A|83541|family with sequence similarity 110, member A##BC004222|FAM110A|83541|family with sequence similarity 110, member A##NM_207121|FAM110A|83541|family with sequence similarity 110, member A##AK122609|RSPO4|343637|R-spondin 4##DQ355152|RSPO4|343637|R-spondin 4##NM_001029871|RSPO4|343637|R-spondin 4##NM_001040007|RSPO4|343637|R-spondin 4##AK302164|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##NM_178578|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##BC126127|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##BC126462|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##NM_006814|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK098612|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK294134|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##D88378|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##HQ258165|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK300667|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	0.0	
chr2	173330576	173330706	reg1020682.p1	7.550	+	TSC_hg19_v1_chr2_+_173292395 X53586 BC136455 BC136456 X59512 AB208842	-38162	+	TSC_hg19_v1_chr2_+_173292316 NM_000210 NM_001079818 BC007002	-38321	+	AK311695 AK296496 TSC_hg19_v1_chr2_+_173292147	-38514	+	TSC_hg19_v1_chr2_+_173420776 NM_002610	90140	+	TSC_hg19_v1_chr2_+_173420856 AK312700 AK304388 BC039158	90184	+	AB528474 CU691664 TSC_hg19_v1_chr2_+_173420875 DQ891300 DQ893348 DQ894484 DQ896668 DQ234350	90234	+	X53586|ITGA6|3655|integrin, alpha 6##BC136455|ITGA6|3655|integrin, alpha 6##BC136456|ITGA6|3655|integrin, alpha 6##X59512|ITGA6|3655|integrin, alpha 6##AB208842|ITGA6|3655|integrin, alpha 6##NM_000210|ITGA6|3655|integrin, alpha 6##NM_001079818|ITGA6|3655|integrin, alpha 6##BC007002|ITGA6|3655|integrin, alpha 6##AK311695|ITGA6|3655|integrin, alpha 6##AK296496|ITGA6|3655|integrin, alpha 6##NM_002610|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##AK312700|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##AK304388|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##BC039158|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ891300|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ893348|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ894484|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ896668|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ234350|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	0.669827	CTCF.p2:2:0.670
chr5	71604347	71604473	reg1020188.p1	7.549	+	TSC_hg19_v1_chr5_+_71502701 AK125194	-101647	+	TSC_hg19_v1_chr5_+_71403301 BC017240 NM_005909 BC025240 BC139918 BC150196 BC046114 AK096273 AK308147 BX647077 BC039822 BC108733 BC032516 BC073993 BC056145 BC063669 BC094834 AB463119	-201131	+	NM_004291 BC029882 U16826 CR542216 CU688778 EU831800 EU831877	-589356	+	CU687962 D87453 TSC_hg19_v1_chr5_-_71616067 BC064902 BC011818 AK299412 AK025417 AK309065	11648	-	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	11670	-	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	11792	+	AK125194|MAP1B|4131|microtubule-associated protein 1B##BC017240|MAP1B|4131|microtubule-associated protein 1B##NM_005909|MAP1B|4131|microtubule-associated protein 1B##BC025240|MAP1B|4131|microtubule-associated protein 1B##BC139918|MAP1B|4131|microtubule-associated protein 1B##BC150196|MAP1B|4131|microtubule-associated protein 1B##BC046114|MAP1B|4131|microtubule-associated protein 1B##AK096273|MAP1B|4131|microtubule-associated protein 1B##AK308147|MAP1B|4131|microtubule-associated protein 1B##BX647077|MAP1B|4131|microtubule-associated protein 1B##BC039822|MAP1B|4131|microtubule-associated protein 1B##BC108733|MAP1B|4131|microtubule-associated protein 1B##BC032516|MAP1B|4131|microtubule-associated protein 1B##BC073993|MAP1B|4131|microtubule-associated protein 1B##BC056145|MAP1B|4131|microtubule-associated protein 1B##BC063669|MAP1B|4131|microtubule-associated protein 1B##BC094834|MAP1B|4131|microtubule-associated protein 1B##NM_004291|CARTPT|9607|CART prepropeptide##BC029882|CARTPT|9607|CART prepropeptide##U16826|CARTPT|9607|CART prepropeptide##CR542216|CARTPT|9607|CART prepropeptide##EU831800|CARTPT|9607|CART prepropeptide##EU831877|CARTPT|9607|CART prepropeptide##D87453|MRPS27|23107|mitochondrial ribosomal protein S27##BC064902|MRPS27|23107|mitochondrial ribosomal protein S27##BC011818|MRPS27|23107|mitochondrial ribosomal protein S27##AK299412|MRPS27|23107|mitochondrial ribosomal protein S27##AK025417|MRPS27|23107|mitochondrial ribosomal protein S27##AK309065|MRPS27|23107|mitochondrial ribosomal protein S27##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2	0.981452	CTCF.p2:11:0.981
chr15	50440702	50440808	reg1017635.p1	7.548	+	TSC_hg19_v1_chr15_-_50411492 BC144298 BC144297 NM_024837	-29289	-	AB075819 TSC_hg19_v1_chr15_-_50405521	-35239	-	TSC_hg19_v1_chr15_+_49913254 NM_001144955 NM_020234 BC018028 AF168717 AK290184 BC093073 BC032535	-527506	+	TSC_hg19_v1_chr15_+_50474425 AK290262 NM_001159629 NM_003645 AF096290 AK222859 D88308 AK223145 BC057770 CU691220	33735	+	AK308833 NM_002112	117406	-	TSC_hg19_v1_chr15_-_50647062 BC068063 BC009935 AK000900	206314	-	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4##AB075819|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_001144955|DTWD1|56986|DTW domain containing 1##NM_020234|DTWD1|56986|DTW domain containing 1##BC018028|DTWD1|56986|DTW domain containing 1##AF168717|DTWD1|56986|DTW domain containing 1##AK290184|DTWD1|56986|DTW domain containing 1##BC093073|DTWD1|56986|DTW domain containing 1##BC032535|DTWD1|56986|DTW domain containing 1##AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK308833|HDC|3067|histidine decarboxylase##NM_002112|HDC|3067|histidine decarboxylase##BC068063|FLJ10038|55056|uncharacterized protein FLJ10038##BC009935|FLJ10038|55056|uncharacterized protein FLJ10038##AK000900|FLJ10038|55056|uncharacterized protein FLJ10038	0.0	
chr17	17517105	17517230	reg1020544.p1	7.548	+	TSC_hg19_v1_chr17_-_17495007 CU690728 AF044214 AF113126 BC000557 BC050593 NM_148172 AK302251	-22192	-	AB029821 NM_007169 TSC_hg19_v1_chr17_-_17485751	-31420	-	AF176806 TSC_hg19_v1_chr17_-_17485724	-31460	-	TSC_hg19_v1_chr17_+_17584772 AB058723 AY172136 NM_030665	67618	+	TSC_hg19_v1_chr17_+_17608164 AF147359	91031	+	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	209737	-	AF044214|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF113126|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC000557|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC050593|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_148172|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AK302251|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AB029821|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_007169|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF176806|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AB058723|RAI1|10743|retinoic acid induced 1##AY172136|RAI1|10743|retinoic acid induced 1##NM_030665|RAI1|10743|retinoic acid induced 1##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1	0.0	
chr3	153645090	153645189	reg1016444.p1	7.548	+	AF086445 NM_001101337	-442856	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-765091	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-765113	+	AK127282 NM_001251962	193652	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	194063	+	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	397121	-	AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36	0.545495	CTCF.p2:8:0.545
chr13	79965536	79965672	reg1020975.p1	7.545	+	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	-732311	-	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	-787881	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	-795322	+	BX648672 BC111697 BC111739 BC041655 NM_022118 TSC_hg19_v1_chr13_-_79979967 AK302871	14350	-	BC030806 TSC_hg19_v1_chr13_-_79980382	14779	-	TSC_hg19_v1_chr13_+_79980440 AK002196 BC034812	14847	+	AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##BX648672|RBM26|64062|RNA binding motif protein 26##BC111697|RBM26|64062|RNA binding motif protein 26##BC111739|RBM26|64062|RNA binding motif protein 26##BC041655|RBM26|64062|RNA binding motif protein 26##NM_022118|RBM26|64062|RNA binding motif protein 26##AK302871|RBM26|64062|RNA binding motif protein 26##BC030806|RBM26|64062|RNA binding motif protein 26##AK002196|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)##BC034812|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)	0.820073	CTCF.p2:22:0.803
chr14	66071824	66071933	reg1016723.p2	7.545	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-192153	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-192390	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-192552	-	AB037806 AF272663 NM_001024218 NM_020806	902246	+	TSC_hg19_v1_chr14_+_66974859 AK025169	902975	+	TSC_hg19_v1_chr14_+_66974870 AK315569	902991	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.066272	
chr22	37710985	37711116	reg1017370.p2	7.545	+	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	-32474	+	TSC_hg19_v1_chr22_+_37678548 AK304453 BC017780	-32513	+	AF125349 AF075458 NM_013385 TSC_hg19_v1_chr22_+_37678513	-32582	+	TSC_hg19_v1_chr22_-_37823515 NM_052906	112478	-	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	171295	-	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	204257	-	BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4##AK304453|CYTH4|27128|cytohesin 4##BC017780|CYTH4|27128|cytohesin 4##AF125349|CYTH4|27128|cytohesin 4##AF075458|CYTH4|27128|cytohesin 4##NM_013385|CYTH4|27128|cytohesin 4##NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2##CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10	0.0	
chr4	8408769	8408863	reg1017498.p1	7.545	+	TSC_hg19_v1_chr4_+_8271480 NM_053044 AY040094 BC034390 BC035717 AY280665 AY280666 AB528940 DQ891188 DQ894371	-137241	+	TSC_hg19_v1_chr4_+_8201038 BC030283 AK074093 NM_018986 BC068094 AK074402 AK126165 BC131785	-207784	+	DQ413176 AJ748600 AJ748601 TSC_hg19_v1_chr4_-_8160541 BC122567 AK130044 AK094754 BC067214 NM_001130083 NM_001130084 NM_001130085 NM_001130086 NM_001130087 NM_001130088 NM_032432	-248282	-	TSC_hg19_v1_chr4_-_8430196 AK313242	21385	-	Y11411 BC017053 TSC_hg19_v1_chr4_-_8442447 AK225080 NM_001101667 NM_003501	33640	-	TSC_hg19_v1_chr4_+_8442503 NM_152544	33698	+	NM_053044|HTRA3|94031|HtrA serine peptidase 3##AY040094|HTRA3|94031|HtrA serine peptidase 3##BC034390|HTRA3|94031|HtrA serine peptidase 3##BC035717|HTRA3|94031|HtrA serine peptidase 3##AY280665|HTRA3|94031|HtrA serine peptidase 3##AY280666|HTRA3|94031|HtrA serine peptidase 3##DQ891188|HTRA3|94031|HtrA serine peptidase 3##DQ894371|HTRA3|94031|HtrA serine peptidase 3##BC030283|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074093|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##NM_018986|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC068094|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074402|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK126165|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC131785|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##DQ413176|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748600|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748601|ABLIM2|84448|actin binding LIM protein family, member 2##BC122567|ABLIM2|84448|actin binding LIM protein family, member 2##AK130044|ABLIM2|84448|actin binding LIM protein family, member 2##AK094754|ABLIM2|84448|actin binding LIM protein family, member 2##BC067214|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130083|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130084|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130085|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130086|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130087|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130088|ABLIM2|84448|actin binding LIM protein family, member 2##NM_032432|ABLIM2|84448|actin binding LIM protein family, member 2##AK313242|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##Y11411|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##BC017053|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK225080|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_001101667|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_003501|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_152544|METTL19|152992|methyltransferase like 19	0.830068	CTCF.p2:15:0.830
chr6	129052423	129052548	reg1019134.p1	7.545	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-210829	-	AK124031 NM_001164687	-812727	-	AK292046 AK097903 BC144034 BC130516 NM_001010923 NM_001164685	-830285	-	NM_000426 NM_001079823 Z26653	151828	+	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	978841	-	NM_001010876	1129930	-	Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##AK292046|THEMIS|387357|thymocyte selection associated##AK097903|THEMIS|387357|thymocyte selection associated##BC144034|THEMIS|387357|thymocyte selection associated##BC130516|THEMIS|387357|thymocyte selection associated##NM_001010923|THEMIS|387357|thymocyte selection associated##NM_001164685|THEMIS|387357|thymocyte selection associated##NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191	0.567993	CTCF.p2:7:0.568
chr6_mann_hap4	4117623	4117750	reg1018767.p1	7.545	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.442633	CTCF.p2:3:0.443
chr7	100186237	100186334	reg1019131.p1	7.545	+	TSC_hg19_v1_chr7_+_100183929 AK292240 NM_033506 BC032497 AK310487 AL136811 BC067293 BC051745	-2283	+	TSC_hg19_v1_chr7_-_100183753 BC018529 NM_002319	-2510	-	AB528535 DQ893565 DQ894240 TSC_hg19_v1_chr7_-_100183751 AK074833 AK302410	-2548	-	AK302252 NM_001163499 NM_012172 AK301864	938	+	NM_002593 TSC_hg19_v1_chr7_+_100199985 AK313748 BC000574 L33799 AB008549 AK298364 BC033205 DQ891923 DQ895108	13694	+	NM_001040097 TSC_hg19_v1_chr7_+_100209784	23484	+	AK292240|FBXO24|26261|F-box protein 24##NM_033506|FBXO24|26261|F-box protein 24##BC032497|FBXO24|26261|F-box protein 24##AK310487|FBXO24|26261|F-box protein 24##AL136811|FBXO24|26261|F-box protein 24##BC067293|FBXO24|26261|F-box protein 24##BC051745|FBXO24|26261|F-box protein 24##BC018529|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##NM_002319|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##DQ893565|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##DQ894240|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##AK074833|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##AK302410|LRCH4|4034|leucine-rich repeats and calponin homology (CH) domain containing 4##AK302252|FBXO24|26261|F-box protein 24##NM_001163499|FBXO24|26261|F-box protein 24##NM_012172|FBXO24|26261|F-box protein 24##AK301864|FBXO24|26261|F-box protein 24##NM_002593|PCOLCE|5118|procollagen C-endopeptidase enhancer##AK313748|PCOLCE|5118|procollagen C-endopeptidase enhancer##BC000574|PCOLCE|5118|procollagen C-endopeptidase enhancer##L33799|PCOLCE|5118|procollagen C-endopeptidase enhancer##AB008549|PCOLCE|5118|procollagen C-endopeptidase enhancer##AK298364|PCOLCE|5118|procollagen C-endopeptidase enhancer##BC033205|PCOLCE|5118|procollagen C-endopeptidase enhancer##DQ891923|PCOLCE|5118|procollagen C-endopeptidase enhancer##DQ895108|PCOLCE|5118|procollagen C-endopeptidase enhancer##NM_001040097|MOSPD3|64598|motile sperm domain containing 3	0.07291	
chr8	120464263	120464370	reg1019286.p1	7.545	+	NM_002514 AK294289 AK312355 TSC_hg19_v1_chr8_+_120428685 AY082381 X96584 BC015028 CU677181 AB463923 DQ891179 DQ894361 CR457432	-35655	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	-243677	+	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	-384847	+	EU131011 DQ891628 DQ894819 D45421 L35594 AK315253 BC034961 TSC_hg19_v1_chr8_-_120651080 NM_001040092 NM_001130863 NM_006209	186746	-	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	380761	-	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	403798	-	NM_002514|NOV|4856|nephroblastoma overexpressed gene##AK294289|NOV|4856|nephroblastoma overexpressed gene##AK312355|NOV|4856|nephroblastoma overexpressed gene##AY082381|NOV|4856|nephroblastoma overexpressed gene##X96584|NOV|4856|nephroblastoma overexpressed gene##BC015028|NOV|4856|nephroblastoma overexpressed gene##DQ891179|NOV|4856|nephroblastoma overexpressed gene##DQ894361|NOV|4856|nephroblastoma overexpressed gene##CR457432|NOV|4856|nephroblastoma overexpressed gene##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##EU131011|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ891628|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ894819|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##D45421|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##L35594|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##AK315253|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC034961|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001040092|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001130863|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_006209|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)	0.440011	CTCF.p2:1:0.440
chr5	15106025	15106165	reg1020923.p1	7.544	+	DQ892588 DQ895806 AK222631 AK315012 BC014526 AF274753 AY358503 TSC_hg19_v1_chr5_-_14871888 AL833238 AB046801 BC009835 NM_054027	-234240	-	TSC_hg19_v1_chr5_+_14664826 BC015392	-441254	+	TSC_hg19_v1_chr5_+_14664772 NM_138348	-441319	+	TSC_hg19_v1_chr5_+_15500291 AB020647 NM_012304	394204	+	BC136424 TSC_hg19_v1_chr5_+_15500549	394449	+	BC075061 TSC_hg19_v1_chr5_+_15500760	394653	+	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)##DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)##AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)##AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)##BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)##AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)##AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)##AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)##BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)##NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)##BC015392|FAM105B|90268|family with sequence similarity 105, member B##NM_138348|FAM105B|90268|family with sequence similarity 105, member B##AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7	0.99944	CTCF.p2:6:0.999
chr8	130903990	130904120	reg1019738.p1	7.544	+	AB042405 NM_031415	-104922	-	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-2097272	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-2155565	+	BC003599 TSC_hg19_v1_chr8_-_130951934	47860	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	47951	-	BC016345 TSC_hg19_v1_chr8_-_131028667	124604	-	AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B	0.91605	CTCF.p2:12:0.916
chr1	111573266	111573375	reg1019046.p1	7.543	+	TSC_hg19_v1_chr1_-_111506545 AY190122 NM_001006945 NM_018372 CR933637	-66769	-	BC040693 TSC_hg19_v1_chr1_+_111415791 M37033 M60871	-157518	+	NM_000560 TSC_hg19_v1_chr1_+_111415769 AK313582 AK298723	-157565	+	BC049196 NM_001007794 AL833102 TSC_hg19_v1_chr1_+_111682370	108989	+	AL833098 TSC_hg19_v1_chr1_-_111682678 AY358492	109364	-	TSC_hg19_v1_chr1_-_111682718 AY336747 BC091509	109411	-	AY190122|LRIF1|55791|ligand dependent nuclear receptor interacting factor 1##NM_001006945|LRIF1|55791|ligand dependent nuclear receptor interacting factor 1##NM_018372|LRIF1|55791|ligand dependent nuclear receptor interacting factor 1##BC040693|CD53|963|CD53 molecule##M37033|CD53|963|CD53 molecule##M60871|CD53|963|CD53 molecule##NM_000560|CD53|963|CD53 molecule##AK313582|CD53|963|CD53 molecule##AK298723|CD53|963|CD53 molecule##BC049196|CEPT1|10390|choline/ethanolamine phosphotransferase 1##NM_001007794|CEPT1|10390|choline/ethanolamine phosphotransferase 1##AL833102|CEPT1|10390|choline/ethanolamine phosphotransferase 1##AL833098|DRAM2|128338|DNA-damage regulated autophagy modulator 2##AY358492|DRAM2|128338|DNA-damage regulated autophagy modulator 2##AY336747|DRAM2|128338|DNA-damage regulated autophagy modulator 2##BC091509|DRAM2|128338|DNA-damage regulated autophagy modulator 2	0.897079	CTCF.p2:-5:0.897
chr12	85451271	85451388	reg1019875.p1	7.543	+	AK022365 NM_001079910 BC005399 BC093088 AK307799	-21206	+	AK126325 NM_001100917	-21275	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	-144737	-	U31986 TSC_hg19_v1_chr12_+_85673999 BC010923 NM_006982	222630	+	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	778716	-	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	778908	-	AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK126325|TSPAN19|144448|tetraspanin 19##NM_001100917|TSPAN19|144448|tetraspanin 19##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##U31986|ALX1|8092|ALX homeobox 1##BC010923|ALX1|8092|ALX homeobox 1##NM_006982|ALX1|8092|ALX homeobox 1##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9	0.417428	CTCF.p2:6:0.417
chr19	54249678	54249803	reg1019113.p1	7.542	+	NM_001012728	-114431	+	AF412400 AF412401 NM_001079907	-191214	+	AF272148 NM_001253801	-191842	+	AF231021 NM_033297	62218	-	CU688384 DQ891084 DQ894266 AK290772 BC028069 AK095460 AY095146 AY154467 AY116204 AY116205 AY116206 AY116207 NM_144687	77797	-	NM_001020820 TSC_hg19_v1_chr19_+_54369637	119891	+	NM_001012728|DPRX|503834|divergent-paired related homeobox##AF412400|ZNF331|55422|zinc finger protein 331##AF412401|ZNF331|55422|zinc finger protein 331##NM_001079907|ZNF331|55422|zinc finger protein 331##AF272148|ZNF331|55422|zinc finger protein 331##NM_001253801|ZNF331|55422|zinc finger protein 331##AF231021|NLRP12|91662|NLR family, pyrin domain containing 12##NM_033297|NLRP12|91662|NLR family, pyrin domain containing 12##DQ891084|NLRP12|91662|NLR family, pyrin domain containing 12##DQ894266|NLRP12|91662|NLR family, pyrin domain containing 12##AK290772|NLRP12|91662|NLR family, pyrin domain containing 12##BC028069|NLRP12|91662|NLR family, pyrin domain containing 12##AK095460|NLRP12|91662|NLR family, pyrin domain containing 12##AY095146|NLRP12|91662|NLR family, pyrin domain containing 12##AY154467|NLRP12|91662|NLR family, pyrin domain containing 12##AY116204|NLRP12|91662|NLR family, pyrin domain containing 12##AY116205|NLRP12|91662|NLR family, pyrin domain containing 12##AY116206|NLRP12|91662|NLR family, pyrin domain containing 12##AY116207|NLRP12|91662|NLR family, pyrin domain containing 12##NM_144687|NLRP12|91662|NLR family, pyrin domain containing 12##NM_001020820|MYADM|91663|myeloid-associated differentiation marker	1.324662	CTCF.p2:11:0.984	CTCF.p2:-17:0.341
chr3	188674763	188674888	reg1021288.p1	7.541	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-9855	+	NM_001167671 BC130584 BC144076	-731591	+	NM_005578 U49957	-744105	+	AK125682 NM_198485 BC101550 BC101552	214986	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	674434	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	832693	+	AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma##U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63	0.954262	CTCF.p2:-3:0.954
chr5	15383721	15383858	reg1017935.p2	7.541	+	DQ892588 DQ895806 AK222631 AK315012 BC014526 AF274753 AY358503 TSC_hg19_v1_chr5_-_14871888 AL833238 AB046801 BC009835 NM_054027	-511934	-	TSC_hg19_v1_chr5_+_14664826 BC015392	-718948	+	TSC_hg19_v1_chr5_+_14664772 NM_138348	-719013	+	TSC_hg19_v1_chr5_+_15500291 AB020647 NM_012304	116510	+	BC136424 TSC_hg19_v1_chr5_+_15500549	116755	+	BC075061 TSC_hg19_v1_chr5_+_15500760	116959	+	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)##DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)##AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)##AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)##BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)##AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)##AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)##AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)##BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)##NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)##BC015392|FAM105B|90268|family with sequence similarity 105, member B##NM_138348|FAM105B|90268|family with sequence similarity 105, member B##AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7	0.0	
chr5	65602336	65602452	reg1015742.p2	7.541	+	BC067770 NM_139168	-161732	+	TSC_hg19_v1_chr5_+_65440162 AK308287 BC017000 AK091758 AX747166 BC047322	-162225	+	TSC_hg19_v1_chr5_+_65440053 NM_001077199	-162334	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	289814	+	AY830839 BC018692 NM_015183	522209	+	BC109069 BC109070 D83597 NM_005582 AK313177	890206	-	BC067770|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_139168|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK308287|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC017000|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK091758|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC047322|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_001077199|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule	0.156931	
chr1	159059122	159059262	reg1019017.p2	7.540	+	AK292042 BC010940 AF024714 NM_004833	-12592	-	NM_001206567 NM_005531 TSC_hg19_v1_chr1_+_158979716 AF208043 M63838 AB208989 BC017059 AF086545 AK296228 AK307957	-79402	+	NM_152501 NM_198928 NM_198929 NM_198930 AY185344 AY185345 AY185346 AY185347 BC090944 AK308350 BC020822 BC073133 BC114470 BC139741	-157833	+	AK289541 NM_021189 TSC_hg19_v1_chr1_+_159141404 AK308915 NM_001127173 AF363367 AY358332 AF062733 BC033819 AY046418 AF529206 DQ890848 DQ894002	82273	+	AK291593 NM_002036	114610	+	NM_001122951 U01839	115856	+	AK292042|AIM2|9447|absent in melanoma 2##BC010940|AIM2|9447|absent in melanoma 2##AF024714|AIM2|9447|absent in melanoma 2##NM_004833|AIM2|9447|absent in melanoma 2##NM_001206567|IFI16|3428|interferon, gamma-inducible protein 16##NM_005531|IFI16|3428|interferon, gamma-inducible protein 16##AF208043|IFI16|3428|interferon, gamma-inducible protein 16##M63838|IFI16|3428|interferon, gamma-inducible protein 16##AB208989|IFI16|3428|interferon, gamma-inducible protein 16##BC017059|IFI16|3428|interferon, gamma-inducible protein 16##AF086545|IFI16|3428|interferon, gamma-inducible protein 16##AK296228|IFI16|3428|interferon, gamma-inducible protein 16##AK307957|IFI16|3428|interferon, gamma-inducible protein 16##NM_152501|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198928|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198929|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198930|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185344|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185345|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185346|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185347|PYHIN1|149628|pyrin and HIN domain family, member 1##BC090944|PYHIN1|149628|pyrin and HIN domain family, member 1##AK308350|PYHIN1|149628|pyrin and HIN domain family, member 1##BC020822|PYHIN1|149628|pyrin and HIN domain family, member 1##BC073133|PYHIN1|149628|pyrin and HIN domain family, member 1##BC114470|PYHIN1|149628|pyrin and HIN domain family, member 1##BC139741|PYHIN1|149628|pyrin and HIN domain family, member 1##AK289541|CADM3|57863|cell adhesion molecule 3##NM_021189|CADM3|57863|cell adhesion molecule 3##AK308915|CADM3|57863|cell adhesion molecule 3##NM_001127173|CADM3|57863|cell adhesion molecule 3##AF363367|CADM3|57863|cell adhesion molecule 3##AY358332|CADM3|57863|cell adhesion molecule 3##AF062733|CADM3|57863|cell adhesion molecule 3##BC033819|CADM3|57863|cell adhesion molecule 3##AY046418|CADM3|57863|cell adhesion molecule 3##AF529206|CADM3|57863|cell adhesion molecule 3##DQ890848|CADM3|57863|cell adhesion molecule 3##DQ894002|CADM3|57863|cell adhesion molecule 3##AK291593|DARC|2532|Duffy blood group, chemokine receptor##NM_002036|DARC|2532|Duffy blood group, chemokine receptor##NM_001122951|DARC|2532|Duffy blood group, chemokine receptor##U01839|DARC|2532|Duffy blood group, chemokine receptor	0.987358	CTCF.p2:-10:0.987
chr12	15380120	15380253	reg1018101.p2	7.540	+	AK311016 BC007997 AK295343 AK313881 NM_001190726 NM_032918	-5836	-	NM_006205 DQ980604 D45399	-254220	+	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	-265638	-	NM_002848 NM_030667 TSC_hg19_v1_chr12_+_15475264 AB209729	95074	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	95365	+	NM_030668 NM_030669 NM_030670 NM_030671 AF152378 AF187042 AF187043 AF187044	319095	+	AK311016|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##BC007997|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK295343|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK313881|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_001190726|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_032918|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AB209729|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	0.199566	
chr14	69727976	69728075	reg1017028.p1	7.540	+	AK299588 TSC_hg19_v1_chr14_+_69726876 AB032956 BC122545 BC098578 AK315848 AK289745 BC036812 AB384119 AB078143 AJ505951	-1088	+	NM_001168368 NM_020692	-1345	+	AK292563 NM_001193362 NM_001193363 AK295601 BX161412	-69509	+	BC071709 TSC_hg19_v1_chr14_-_69865012 BC014301 AK130850 AK312186 D85758 NM_004450 U66871	136978	-	NM_001252151 NM_001252152 AK293222 AK316381 TSC_hg19_v1_chr14_+_69865137	137093	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	137370	+	AK299588|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AB032956|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC122545|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC098578|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK315848|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK289745|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC036812|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AB078143|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AJ505951|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##NM_001168368|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##NM_020692|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2##AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2##BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2##BC071709|ERH|2079|enhancer of rudimentary homolog (Drosophila)##BC014301|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK130850|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK312186|ERH|2079|enhancer of rudimentary homolog (Drosophila)##D85758|ERH|2079|enhancer of rudimentary homolog (Drosophila)##NM_004450|ERH|2079|enhancer of rudimentary homolog (Drosophila)##U66871|ERH|2079|enhancer of rudimentary homolog (Drosophila)##NM_001252151|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252152|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK293222|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK316381|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9	0.881525	CTCF.p2:-15:0.882
chr21	44238459	44238607	reg1018169.p1	7.539	+	TSC_hg19_v1_chr21_+_44073730 NM_001001567 NM_001001568 NM_001001569 NM_001001570 NM_001001571 NM_001001572 NM_001001573 NM_001001574 NM_001001575 NM_001001576 NM_001001577 NM_001001578 NM_001001579 NM_001001580 NM_001001581 NM_001001582 NM_001001583 NM_001001584 NM_001001585 NM_002606 AF048837 AY701187 BC009047 AK314679 AY196299 AY196300 AY196301 AY196302 AY196303 AY196304 AY196305 AY196306 AY196307 AY196308 AY196309 AY196310 AY196311 AY196312 AY196313 AY196314 AK001307 AK294112 AF067223 AF067224 AF067225 AF067226 AB527758 AY242121 BT007016 GQ129331 GQ129332	-164746	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	-304530	+	AJ269529 NM_018964	-318792	+	AB590172 CU675357 DQ892967 DQ896215 TSC_hg19_v1_chr21_-_44299643 AK292923 AK315008 AJ243912 AJ243913 BC006341	61091	-	TSC_hg19_v1_chr21_-_44299690 BC001074 NM_018669 NM_033661 AK298015	61151	-	TSC_hg19_v1_chr21_+_44313422 NM_001001503 NM_021075 BC054016 BC021217 AK308228 AK289586 BC033766 CU676876 CU689730 CR542174 CR542190	74868	+	NM_001001567|PDE9A|5152|phosphodiesterase 9A##NM_001001568|PDE9A|5152|phosphodiesterase 9A##NM_001001569|PDE9A|5152|phosphodiesterase 9A##NM_001001570|PDE9A|5152|phosphodiesterase 9A##NM_001001571|PDE9A|5152|phosphodiesterase 9A##NM_001001572|PDE9A|5152|phosphodiesterase 9A##NM_001001573|PDE9A|5152|phosphodiesterase 9A##NM_001001574|PDE9A|5152|phosphodiesterase 9A##NM_001001575|PDE9A|5152|phosphodiesterase 9A##NM_001001576|PDE9A|5152|phosphodiesterase 9A##NM_001001577|PDE9A|5152|phosphodiesterase 9A##NM_001001578|PDE9A|5152|phosphodiesterase 9A##NM_001001579|PDE9A|5152|phosphodiesterase 9A##NM_001001580|PDE9A|5152|phosphodiesterase 9A##NM_001001581|PDE9A|5152|phosphodiesterase 9A##NM_001001582|PDE9A|5152|phosphodiesterase 9A##NM_001001583|PDE9A|5152|phosphodiesterase 9A##NM_001001584|PDE9A|5152|phosphodiesterase 9A##NM_001001585|PDE9A|5152|phosphodiesterase 9A##NM_002606|PDE9A|5152|phosphodiesterase 9A##AF048837|PDE9A|5152|phosphodiesterase 9A##AY701187|PDE9A|5152|phosphodiesterase 9A##BC009047|PDE9A|5152|phosphodiesterase 9A##AK314679|PDE9A|5152|phosphodiesterase 9A##AY196299|PDE9A|5152|phosphodiesterase 9A##AY196300|PDE9A|5152|phosphodiesterase 9A##AY196301|PDE9A|5152|phosphodiesterase 9A##AY196302|PDE9A|5152|phosphodiesterase 9A##AY196303|PDE9A|5152|phosphodiesterase 9A##AY196304|PDE9A|5152|phosphodiesterase 9A##AY196305|PDE9A|5152|phosphodiesterase 9A##AY196306|PDE9A|5152|phosphodiesterase 9A##AY196307|PDE9A|5152|phosphodiesterase 9A##AY196308|PDE9A|5152|phosphodiesterase 9A##AY196309|PDE9A|5152|phosphodiesterase 9A##AY196310|PDE9A|5152|phosphodiesterase 9A##AY196311|PDE9A|5152|phosphodiesterase 9A##AY196312|PDE9A|5152|phosphodiesterase 9A##AY196313|PDE9A|5152|phosphodiesterase 9A##AY196314|PDE9A|5152|phosphodiesterase 9A##AK001307|PDE9A|5152|phosphodiesterase 9A##AK294112|PDE9A|5152|phosphodiesterase 9A##AF067223|PDE9A|5152|phosphodiesterase 9A##AF067224|PDE9A|5152|phosphodiesterase 9A##AF067225|PDE9A|5152|phosphodiesterase 9A##AF067226|PDE9A|5152|phosphodiesterase 9A##AY242121|PDE9A|5152|phosphodiesterase 9A##BT007016|PDE9A|5152|phosphodiesterase 9A##GQ129331|PDE9A|5152|phosphodiesterase 9A##GQ129332|PDE9A|5152|phosphodiesterase 9A##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##DQ892967|WDR4|10785|WD repeat domain 4##DQ896215|WDR4|10785|WD repeat domain 4##AK292923|WDR4|10785|WD repeat domain 4##AK315008|WDR4|10785|WD repeat domain 4##AJ243912|WDR4|10785|WD repeat domain 4##AJ243913|WDR4|10785|WD repeat domain 4##BC006341|WDR4|10785|WD repeat domain 4##BC001074|WDR4|10785|WD repeat domain 4##NM_018669|WDR4|10785|WD repeat domain 4##NM_033661|WDR4|10785|WD repeat domain 4##AK298015|WDR4|10785|WD repeat domain 4##NM_001001503|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##NM_021075|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC054016|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC021217|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK308228|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK289586|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC033766|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542174|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542190|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa	0.624801	CTCF.p2:5:0.625
chr2	91998969	91999116	reg1020288.p1	7.539	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-151039	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-1787324	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-1921288	+	AK097438 BC021716 NM_144705 AK296678 CU692394	3538208	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	3692440	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	3788500	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.843859	CTCF.p2:-36:0.829
chr3	31011845	31011951	reg1018544.p1	7.539	+	AL832766 NM_207359	-75746	-	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-363495	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-363876	+	TSC_hg19_v1_chr3_+_31574119 AK311488	562232	+	TSC_hg19_v1_chr3_+_31574468 AK074587	562551	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	562584	+	AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.640932	CTCF.p2:-20:0.641
chr3	53333702	53333829	reg1017854.p2	7.539	+	TSC_hg19_v1_chr3_-_53290099 NM_001064 NM_001135055	-43651	-	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	-43754	-	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	-138546	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	47828	-	TSC_hg19_v1_chr3_+_53528709 M76558	194894	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	195346	+	NM_001064|TKT|7086|transketolase##NM_001135055|TKT|7086|transketolase##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase##BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit	0.80641	CTCF.p2:-10:0.806
chr8	21779645	21779772	reg1020818.p1	7.539	+	TSC_hg19_v1_chr8_+_21777257 AK291472 AB018288 AF064729 CU689010	-2460	+	TSC_hg19_v1_chr8_+_21777194 NM_015024 BC030785	-2519	+	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	-8543	-	TSC_hg19_v1_chr8_+_21881644 AK094267	101927	+	AY262114 NM_182795 BC068078	102649	+	BC105131 BC113489 BC143789 AY358869 AB009249 BC069475 NM_003867 HQ258756	120706	+	AK291472|XPO7|23039|exportin 7##AB018288|XPO7|23039|exportin 7##AF064729|XPO7|23039|exportin 7##NM_015024|XPO7|23039|exportin 7##BC030785|XPO7|23039|exportin 7##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa##AK094267|NPM2|10361|nucleophosmin/nucleoplasmin 2##AY262114|NPM2|10361|nucleophosmin/nucleoplasmin 2##NM_182795|NPM2|10361|nucleophosmin/nucleoplasmin 2##BC068078|NPM2|10361|nucleophosmin/nucleoplasmin 2##BC105131|FGF17|8822|fibroblast growth factor 17##BC113489|FGF17|8822|fibroblast growth factor 17##BC143789|FGF17|8822|fibroblast growth factor 17##AY358869|FGF17|8822|fibroblast growth factor 17##AB009249|FGF17|8822|fibroblast growth factor 17##BC069475|FGF17|8822|fibroblast growth factor 17##NM_003867|FGF17|8822|fibroblast growth factor 17##HQ258756|FGF17|8822|fibroblast growth factor 17	0.011638	
chr16	88747627	88747729	reg1018439.p1	7.538	+	TSC_hg19_v1_chr16_+_88729781 BC015583 BC050404	-17883	+	TSC_hg19_v1_chr16_+_88729753 BX640980	-17927	+	BT006930 AB527587 DQ890562 DQ893724 TSC_hg19_v1_chr16_-_88729519 NM_002461 U49260 AB209229 BC000011	-18161	-	BC041461 AB464228 TSC_hg19_v1_chr16_-_88752874	5153	-	TSC_hg19_v1_chr16_-_88752882 BC107058 NM_178310	5213	-	AK057106 NM_001171816	22346	-	BC015583|MGC23284|197187|uncharacterized LOC197187##BC050404|MGC23284|197187|uncharacterized LOC197187##BX640980|MGC23284|197187|uncharacterized LOC197187##BT006930|MVD|4597|mevalonate (diphospho) decarboxylase##DQ890562|MVD|4597|mevalonate (diphospho) decarboxylase##DQ893724|MVD|4597|mevalonate (diphospho) decarboxylase##NM_002461|MVD|4597|mevalonate (diphospho) decarboxylase##U49260|MVD|4597|mevalonate (diphospho) decarboxylase##AB209229|MVD|4597|mevalonate (diphospho) decarboxylase##BC000011|MVD|4597|mevalonate (diphospho) decarboxylase##BC041461|SNAI3|333929|snail homolog 3 (Drosophila)##BC107058|SNAI3|333929|snail homolog 3 (Drosophila)##NM_178310|SNAI3|333929|snail homolog 3 (Drosophila)##AK057106|RNF166|115992|ring finger protein 166##NM_001171816|RNF166|115992|ring finger protein 166	0.988607	CTCF.p2:-8:0.989
chr2	65938276	65938391	reg1017379.p1	7.538	+	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	-274496	+	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	-278657	-	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	-279121	-	AL832770 BC043503 NM_002398	724190	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	724507	+	TSC_hg19_v1_chr2_+_66666452 AK297109	728117	+	AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein##BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AL832770|MEIS1|4211|Meis homeobox 1##BC043503|MEIS1|4211|Meis homeobox 1##NM_002398|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##AK297109|MEIS1|4211|Meis homeobox 1	0.923928	CTCF.p2:10:0.924
chr10	111985882	111985994	reg1019066.p2	7.537	+	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-117	+	BC012907 NM_001008541	-15950	+	TSC_hg19_v1_chr10_+_111967381 BC035128 NM_130439	-18579	+	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	78655	-	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	78762	-	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	271813	+	AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##BC012907|MXI1|4601|MAX interactor 1##NM_001008541|MXI1|4601|MAX interactor 1##BC035128|MXI1|4601|MAX interactor 1##NM_130439|MXI1|4601|MAX interactor 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5	0.026328	
chr14	24379906	24380041	reg1018916.p2	7.537	+	AK222857 NM_005794 NM_182908 AK309945 BC002786 U31875	-274395	+	BC055429 TSC_hg19_v1_chr14_-_24048004 AB058734 NM_001146028 NM_032452	-331973	-	TSC_hg19_v1_chr14_-_24047779 AK091572 AX747068	-332175	-	TSC_hg19_v1_chr14_-_24422882 BX247982	42903	-	TSC_hg19_v1_chr14_+_24422978 AY616182 DQ344810 NM_021004 AY358638 AF064256 AF044127 AK001870 AK308436 DQ325464 AK314448 AY071856 BC003019 AK301201 DQ338571	43054	+	BC062348 BC080582 TSC_hg19_v1_chr14_-_24423358 BX647964	43378	-	AK222857|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##NM_005794|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##NM_182908|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##AK309945|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##BC002786|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##U31875|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##BC055429|JPH4|84502|junctophilin 4##AB058734|JPH4|84502|junctophilin 4##NM_001146028|JPH4|84502|junctophilin 4##NM_032452|JPH4|84502|junctophilin 4##AK091572|JPH4|84502|junctophilin 4##BX247982|C14orf167|55449|chromosome 14 open reading frame 167##AY616182|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ344810|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##NM_021004|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY358638|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF064256|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF044127|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK001870|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK308436|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ325464|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK314448|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY071856|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##BC003019|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ338571|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##BC062348|C14orf167|55449|chromosome 14 open reading frame 167##BC080582|C14orf167|55449|chromosome 14 open reading frame 167##BX647964|C14orf167|55449|chromosome 14 open reading frame 167	0.519794	CTCF.p2:18:0.520
chr2	95858795	95858879	reg1016712.p1	7.537	+	AK295739 TSC_hg19_v1_chr2_+_95831557 AK315762 AK290798 AK315829 AK299058 X60154	-27285	+	X60152 AK055072 NM_001017396 NM_021088 BC005068 CR749650	-27644	+	BC068498 TSC_hg19_v1_chr2_-_95825526	-33321	-	TSC_hg19_v1_chr2_+_95940195 AF245303 AF245304 NM_001165977 NM_001165978 NM_144707	81360	+	BC113877 BC114525 AK091175 AX746828 TSC_hg19_v1_chr2_+_95940239 AK290366 AK313267 AY358377 BC025736	81397	+	TSC_hg19_v1_chr2_+_95963054 NM_013434 AB209076 AJ131730 AK095539 AK315437 BC012850 AF120102 AB528387 AF199599 AF367022 BT020075 CU680412 DQ148485 DQ892078 DQ895271 DQ895316	104269	+	AK295739|ZNF2|7549|zinc finger protein 2##AK315762|ZNF2|7549|zinc finger protein 2##AK290798|ZNF2|7549|zinc finger protein 2##AK315829|ZNF2|7549|zinc finger protein 2##AK299058|ZNF2|7549|zinc finger protein 2##X60154|ZNF2|7549|zinc finger protein 2##X60152|ZNF2|7549|zinc finger protein 2##AK055072|ZNF2|7549|zinc finger protein 2##NM_001017396|ZNF2|7549|zinc finger protein 2##NM_021088|ZNF2|7549|zinc finger protein 2##BC005068|ZNF2|7549|zinc finger protein 2##CR749650|ZNF2|7549|zinc finger protein 2##BC068498|ZNF514|84874|zinc finger protein 514##AF245303|PROM2|150696|prominin 2##AF245304|PROM2|150696|prominin 2##NM_001165977|PROM2|150696|prominin 2##NM_001165978|PROM2|150696|prominin 2##NM_144707|PROM2|150696|prominin 2##BC113877|PROM2|150696|prominin 2##BC114525|PROM2|150696|prominin 2##AK091175|PROM2|150696|prominin 2##AK290366|PROM2|150696|prominin 2##AK313267|PROM2|150696|prominin 2##AY358377|PROM2|150696|prominin 2##BC025736|PROM2|150696|prominin 2##NM_013434|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AJ131730|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK095539|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK315437|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC012850|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF120102|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF199599|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF367022|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BT020075|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ148485|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ892078|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895271|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895316|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	0.830069	CTCF.p2:-2:0.830
chr1	17287229	17287371	reg1018213.p1	7.536	+	TSC_hg19_v1_chr1_+_17248425 NM_014675	-38866	+	AK123337 TSC_hg19_v1_chr1_-_16971178	-316123	-	TSC_hg19_v1_chr1_-_16971175 AK090414	-316134	-	TSC_hg19_v1_chr1_-_17307116 BC028033 AK222751 BC015039 NM_001135248 NM_002403	19849	-	AK301655 NM_001135247 NM_017459	20776	-	AL354615 AY461712 TSC_hg19_v1_chr1_-_17338424 BC030267 AK290210 NM_001141973 NM_001141974 NM_022089	51083	-	NM_014675|CROCC|9696|ciliary rootlet coiled-coil, rootletin##AK123337|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##BC028033|MFAP2|4237|microfibrillar-associated protein 2##AK222751|MFAP2|4237|microfibrillar-associated protein 2##BC015039|MFAP2|4237|microfibrillar-associated protein 2##NM_001135248|MFAP2|4237|microfibrillar-associated protein 2##NM_002403|MFAP2|4237|microfibrillar-associated protein 2##AK301655|MFAP2|4237|microfibrillar-associated protein 2##NM_001135247|MFAP2|4237|microfibrillar-associated protein 2##NM_017459|MFAP2|4237|microfibrillar-associated protein 2##AL354615|ATP13A2|23400|ATPase type 13A2##AY461712|ATP13A2|23400|ATPase type 13A2##BC030267|ATP13A2|23400|ATPase type 13A2##AK290210|ATP13A2|23400|ATPase type 13A2##NM_001141973|ATP13A2|23400|ATPase type 13A2##NM_001141974|ATP13A2|23400|ATPase type 13A2##NM_022089|ATP13A2|23400|ATPase type 13A2	0.604808	CTCF.p2:-64:0.588
chr14	39937241	39937360	reg1018564.p1	7.536	+	BC053537 BC068566 BC030611 NM_203301	-35639	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-35943	-	TSC_hg19_v1_chr14_+_39736592 BC039017 AK315254 BC029513 BC051363 U73682	-200727	+	NM_152447 AK096627	2139467	+	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	5039175	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	5429198	+	BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##BC039017|CTAGE5|4253|CTAGE family, member 5##AK315254|CTAGE5|4253|CTAGE family, member 5##BC029513|CTAGE5|4253|CTAGE family, member 5##BC051363|CTAGE5|4253|CTAGE family, member 5##U73682|CTAGE5|4253|CTAGE family, member 5##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28	0.823201	CTCF.p2:-6:0.823
chr5	42995129	42995249	reg1017821.p2	7.535	+	TSC_hg19_v1_chr5_-_42993436 AK056817	-1743	-	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	-183198	-	AK303469 NM_001134848 AK127368 BC015985 BC039102 TSC_hg19_v1_chr5_+_42756958	-238251	+	AB463523 BC067873 AY032883 NM_001014279	45107	-	AK307963 TSC_hg19_v1_chr5_+_43121018 BC045109	125812	+	TSC_hg19_v1_chr5_+_43121609 AK299315 AK307977	126425	+	AK056817|FLJ32255|643977|uncharacterized LOC643977##Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK303469|CCDC152|100129792|coiled-coil domain containing 152##NM_001134848|CCDC152|100129792|coiled-coil domain containing 152##AK127368|CCDC152|100129792|coiled-coil domain containing 152##BC015985|CCDC152|100129792|coiled-coil domain containing 152##BC039102|CCDC152|100129792|coiled-coil domain containing 152##BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39##AK307963|ZNF131|7690|zinc finger protein 131##AK299315|ZNF131|7690|zinc finger protein 131##AK307977|ZNF131|7690|zinc finger protein 131	0.149972	
chr22	24638860	24639040	reg1019462.p1	7.534	+	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	-61506	+	TSC_hg19_v1_chr22_+_24577424 AK026431	-61523	+	TSC_hg19_v1_chr22_+_24551954 AL390166	-86993	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	2029	-	TSC_hg19_v1_chr22_+_24666804 NM_001145468 NM_015330 AK097129 AK301482 AB209022 AL832425 BC005093 BC136471	27890	+	TSC_hg19_v1_chr22_+_24819870 EU036694	180930	+	BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##AK026431|SUSD2|56241|sushi domain containing 2##AL390166|CABIN1|23523|calcineurin binding protein 1##CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5##NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##EU036694|ADORA2A|135|adenosine A2a receptor	0.828714	CTCF.p2:0:0.829
chr3	64519424	64519544	reg1017468.p1	7.534	+	BC119002 AL833539 NM_198859	-308364	-	AF530062 AB463196 TSC_hg19_v1_chr3_-_64009149 BC000630 AK095059 AY568086 D14663 NM_014814 BC012369 BC000904 AK290205 BX647742 AF215935	-510334	-	NM_001128149 AK310745 AK304062	-566027	+	AK057923 TSC_hg19_v1_chr3_+_64670789 BC040632	151307	+	AB037733 TSC_hg19_v1_chr3_-_64672299	152811	-	TSC_hg19_v1_chr3_-_64673334 AF261918 BC130578 BC171764 AF488803 NM_182920	153863	-	BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)##NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_001128149|ATXN7|6314|ataxin 7##AK310745|ATXN7|6314|ataxin 7##AK304062|ATXN7|6314|ataxin 7##AK057923|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##BC040632|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	0.972532	CTCF.p2:-6:0.973
chr4	70555416	70555528	reg1014290.p1	7.534	+	AK314209 AK304249 NM_001252274 NM_001252275 NM_006798	-36507	-	FJ664272 FJ664273 NM_001105677	-50113	-	AY529122 DQ895203 AF064200 AF081793 AJ005162 Y00317 BC026264 TSC_hg19_v1_chr4_-_70361624 AK292748 NM_021139	-193870	-	BC010895 NM_014465	70957	-	S77383 Y11195 AK310845 U08098 TSC_hg19_v1_chr4_-_70725864 BC027956 NM_005420	170358	-	NM_001025104 NM_001890 X78416 BC128227 BC128228 U23157	241336	+	AK314209|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##AK304249|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252274|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252275|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_006798|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##FJ664272|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##FJ664273|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##NM_001105677|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##AY529122|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##DQ895203|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF064200|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF081793|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AJ005162|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##Y00317|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##BC026264|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AK292748|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##NM_021139|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##BC010895|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1##NM_014465|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1##S77383|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##Y11195|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##AK310845|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##U08098|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##BC027956|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##NM_005420|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##NM_001025104|CSN1S1|1446|casein alpha s1##NM_001890|CSN1S1|1446|casein alpha s1##X78416|CSN1S1|1446|casein alpha s1##BC128227|CSN1S1|1446|casein alpha s1##BC128228|CSN1S1|1446|casein alpha s1##U23157|CSN1S1|1446|casein alpha s1	0.893461	CTCF.p2:-44:0.893
chr7	1452552	1452699	reg1021971.p1	7.534	+	TSC_hg19_v1_chr7_+_1272552 NM_001080461	-180023	+	TSC_hg19_v1_chr7_+_1200097 AK090593	-252512	+	TSC_hg19_v1_chr7_-_1199853 NM_182491	-252786	-	CU691530 EU832111 EU832205 AK074068 BC037988 TSC_hg19_v1_chr7_-_1499102	46408	-	TSC_hg19_v1_chr7_-_1499107 AK027124 NM_182924	46482	-	TSC_hg19_v1_chr7_-_1544019 AK093809 AX748318 NM_001080453	91408	-	NM_001080461|UNCX|340260|UNC homeobox##NM_182491|ZFAND2A|90637|zinc finger, AN1-type domain 2A##EU832111|MICALL2|79778|MICAL-like 2##EU832205|MICALL2|79778|MICAL-like 2##AK074068|MICALL2|79778|MICAL-like 2##BC037988|MICALL2|79778|MICAL-like 2##AK027124|MICALL2|79778|MICAL-like 2##NM_182924|MICALL2|79778|MICAL-like 2##NM_001080453|INTS1|26173|integrator complex subunit 1	0.995363	CTCF.p2:-15:0.995
chr1	86078902	86078970	reg1020899.p2	7.533	+	TSC_hg19_v1_chr1_+_86046443 AK223385 AK295430 AK314571 NM_001554 BC016952 Y12084 Z98053 Y11307 BC009199 U62015 BC001271 AF003594 AF031385 DQ891262 DQ894449 AB587390 CR536519 CU677777	-32385	+	BX648145 NM_001134445 AK304876	-34946	-	TSC_hg19_v1_chr1_-_85930843 BC033680 AK312432 NM_012137	-147996	-	EU446811 AK000767 TSC_hg19_v1_chr1_-_86174035 BC110898 AK314566	95070	-	TSC_hg19_v1_chr1_-_86174088 AL442074 BC026236 AK298149 NM_001170670 NM_017953	95177	-	BC116180 BC113654 BC117170 BC143715 BC143717 BC143718 AY244357 NM_152890	543177	-	AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61##NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61##Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61##Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61##Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61##U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61##DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61##DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61##CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##BC033680|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##AK312432|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##NM_012137|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##EU446811|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK000767|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC110898|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK314566|ZNHIT6|54680|zinc finger, HIT-type containing 6##AL442074|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC026236|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK298149|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_001170670|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_017953|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC116180|COL24A1|255631|collagen, type XXIV, alpha 1##BC113654|COL24A1|255631|collagen, type XXIV, alpha 1##BC117170|COL24A1|255631|collagen, type XXIV, alpha 1##BC143715|COL24A1|255631|collagen, type XXIV, alpha 1##BC143717|COL24A1|255631|collagen, type XXIV, alpha 1##BC143718|COL24A1|255631|collagen, type XXIV, alpha 1##AY244357|COL24A1|255631|collagen, type XXIV, alpha 1##NM_152890|COL24A1|255631|collagen, type XXIV, alpha 1	0.147927	
chr8	55464352	55464474	reg1019885.p1	7.533	+	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	-93897	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-416602	+	TSC_hg19_v1_chr8_-_55014465 CR457103 CU679013 DQ891527 DQ894717 BC010397 AF077198 AF077199 AF291053 AK307277 AK313739 AF081281 AK298206 AK289400 BC008652 AF052112 NM_006330	-449915	-	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	64239	+	BC106028 AY534241 NM_052898	550601	+	AF286340 NM_024831	1221332	+	AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##CR457103|LYPLA1|10434|lysophospholipase I##DQ891527|LYPLA1|10434|lysophospholipase I##DQ894717|LYPLA1|10434|lysophospholipase I##BC010397|LYPLA1|10434|lysophospholipase I##AF077198|LYPLA1|10434|lysophospholipase I##AF077199|LYPLA1|10434|lysophospholipase I##AF291053|LYPLA1|10434|lysophospholipase I##AK307277|LYPLA1|10434|lysophospholipase I##AK313739|LYPLA1|10434|lysophospholipase I##AF081281|LYPLA1|10434|lysophospholipase I##AK298206|LYPLA1|10434|lysophospholipase I##AK289400|LYPLA1|10434|lysophospholipase I##BC008652|LYPLA1|10434|lysophospholipase I##AF052112|LYPLA1|10434|lysophospholipase I##NM_006330|LYPLA1|10434|lysophospholipase I##AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##AF286340|TGS1|96764|trimethylguanosine synthase 1##NM_024831|TGS1|96764|trimethylguanosine synthase 1	0.620555	CTCF.p2:-1:0.508
chr10	5476098	5476219	reg1017617.p1	7.532	+	TSC_hg19_v1_chr10_+_5454547 NM_001047160 AK299335 BC053553 S82401 AB587387 CU690984	-21573	+	TSC_hg19_v1_chr10_-_5446792 BC098247 BC099716 BC105634 AK296616 AK025318 NM_001171864 NM_024803	-29370	-	NM_053049 BC100867 BC100868 BC100869 BC100870	-69144	+	TSC_hg19_v1_chr10_+_5488571 NM_005863 AK294244 AK304028 AK315566 AK024919 AJ010046 BC010285 CU679671	12465	+	AB590761 AF172852 BC039172 AK222744 NM_017422	65308	-	AK313934 M58026 NM_005185 BC031889 AB590316	90827	+	NM_001047160|NET1|10276|neuroepithelial cell transforming 1##AK299335|NET1|10276|neuroepithelial cell transforming 1##BC053553|NET1|10276|neuroepithelial cell transforming 1##S82401|NET1|10276|neuroepithelial cell transforming 1##BC098247|TUBAL3|79861|tubulin, alpha-like 3##BC099716|TUBAL3|79861|tubulin, alpha-like 3##BC105634|TUBAL3|79861|tubulin, alpha-like 3##AK296616|TUBAL3|79861|tubulin, alpha-like 3##AK025318|TUBAL3|79861|tubulin, alpha-like 3##NM_001171864|TUBAL3|79861|tubulin, alpha-like 3##NM_024803|TUBAL3|79861|tubulin, alpha-like 3##NM_053049|UCN3|114131|urocortin 3 (stresscopin)##BC100867|UCN3|114131|urocortin 3 (stresscopin)##BC100868|UCN3|114131|urocortin 3 (stresscopin)##BC100869|UCN3|114131|urocortin 3 (stresscopin)##BC100870|UCN3|114131|urocortin 3 (stresscopin)##NM_005863|NET1|10276|neuroepithelial cell transforming 1##AK294244|NET1|10276|neuroepithelial cell transforming 1##AK304028|NET1|10276|neuroepithelial cell transforming 1##AK315566|NET1|10276|neuroepithelial cell transforming 1##AK024919|NET1|10276|neuroepithelial cell transforming 1##AJ010046|NET1|10276|neuroepithelial cell transforming 1##BC010285|NET1|10276|neuroepithelial cell transforming 1##AF172852|CALML5|51806|calmodulin-like 5##BC039172|CALML5|51806|calmodulin-like 5##AK222744|CALML5|51806|calmodulin-like 5##NM_017422|CALML5|51806|calmodulin-like 5##AK313934|CALML3|810|calmodulin-like 3##M58026|CALML3|810|calmodulin-like 3##NM_005185|CALML3|810|calmodulin-like 3##BC031889|CALML3|810|calmodulin-like 3	0.18812	
chr1	20560006	20560105	reg1018532.p1	7.532	+	BC047428 NM_152376 BX648631 AK058158 TSC_hg19_v1_chr1_+_20512591	-47471	+	NM_001105572	-58369	-	TSC_hg19_v1_chr1_+_20480706 BC041651	-79292	+	NM_001039500 AK125833	57365	+	AY204901 TSC_hg19_v1_chr1_-_20812323	252243	-	NM_018584 TSC_hg19_v1_chr1_-_20812743	252726	-	BC047428|UBXN10|127733|UBX domain protein 10##NM_152376|UBXN10|127733|UBX domain protein 10##BX648631|UBXN10|127733|UBX domain protein 10##AK058158|UBXN10|127733|UBX domain protein 10##NM_001105572|PLA2G2C|391013|phospholipase A2, group IIC##NM_001039500|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AK125833|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AY204901|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##NM_018584|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1	0.0	
chr13	48669279	48669423	reg1018019.p2	7.532	+	TSC_hg19_v1_chr13_-_48669241 AK001934 AK222713 NM_014166 AK301835 BC005189	-82	-	AK223017 TSC_hg19_v1_chr13_-_48669236 AF161475	-117	-	AF230381 AF300618 CR457276 CR541830 DQ893076 DQ896333 TSC_hg19_v1_chr13_-_48669222	-130	-	TSC_hg19_v1_chr13_+_48807293 NM_021999 BC018053 AF092128 AF136973	137927	+	TSC_hg19_v1_chr13_+_48807341 AF152462 AF246221 BC016148 AK000503 AK027411 AK130048 BC000554 AF086918	137993	+	AB527639 DQ890591 DQ893759 CU674270 BT006863 TSC_hg19_v1_chr13_+_48807572	138182	+	AK001934|MED4|29079|mediator complex subunit 4##AK222713|MED4|29079|mediator complex subunit 4##NM_014166|MED4|29079|mediator complex subunit 4##AK301835|MED4|29079|mediator complex subunit 4##BC005189|MED4|29079|mediator complex subunit 4##AK223017|MED4|29079|mediator complex subunit 4##AF161475|MED4|29079|mediator complex subunit 4##AF230381|MED4|29079|mediator complex subunit 4##AF300618|MED4|29079|mediator complex subunit 4##CR457276|MED4|29079|mediator complex subunit 4##CR541830|MED4|29079|mediator complex subunit 4##DQ893076|MED4|29079|mediator complex subunit 4##DQ896333|MED4|29079|mediator complex subunit 4##NM_021999|ITM2B|9445|integral membrane protein 2B##BC018053|ITM2B|9445|integral membrane protein 2B##AF092128|ITM2B|9445|integral membrane protein 2B##AF136973|ITM2B|9445|integral membrane protein 2B##AF152462|ITM2B|9445|integral membrane protein 2B##AF246221|ITM2B|9445|integral membrane protein 2B##BC016148|ITM2B|9445|integral membrane protein 2B##AK000503|ITM2B|9445|integral membrane protein 2B##AK027411|ITM2B|9445|integral membrane protein 2B##AK130048|ITM2B|9445|integral membrane protein 2B##BC000554|ITM2B|9445|integral membrane protein 2B##AF086918|ITM2B|9445|integral membrane protein 2B##DQ890591|ITM2B|9445|integral membrane protein 2B##DQ893759|ITM2B|9445|integral membrane protein 2B##BT006863|ITM2B|9445|integral membrane protein 2B	0.777773	CTCF.p2:29:0.760
chr17	35596709	35596889	reg1018843.p1	7.532	+	AK057229 NM_012138 TSC_hg19_v1_chr17_+_35306253 AF083208 BC000591 AJ249940 AB385572 CU674286 DQ892097 DQ895290	-290500	+	BC020470 NM_005568	-302028	+	BC084573 TSC_hg19_v1_chr17_-_35293961	-302859	-	AY315619 AY315620 NM_198837 NM_198838	59892	-	TSC_hg19_v1_chr17_-_35716040 AB371587 AK309084 AY315621 AY315622 NM_198836	119253	-	AK096966 BC034672 NM_173625 CU689930	136181	+	AK057229|AATF|26574|apoptosis antagonizing transcription factor##NM_012138|AATF|26574|apoptosis antagonizing transcription factor##AF083208|AATF|26574|apoptosis antagonizing transcription factor##BC000591|AATF|26574|apoptosis antagonizing transcription factor##AJ249940|AATF|26574|apoptosis antagonizing transcription factor##DQ892097|AATF|26574|apoptosis antagonizing transcription factor##DQ895290|AATF|26574|apoptosis antagonizing transcription factor##BC020470|LHX1|3975|LIM homeobox 1##NM_005568|LHX1|3975|LIM homeobox 1##AY315619|ACACA|31|acetyl-CoA carboxylase alpha##AY315620|ACACA|31|acetyl-CoA carboxylase alpha##NM_198837|ACACA|31|acetyl-CoA carboxylase alpha##NM_198838|ACACA|31|acetyl-CoA carboxylase alpha##AB371587|ACACA|31|acetyl-CoA carboxylase alpha##AK309084|ACACA|31|acetyl-CoA carboxylase alpha##AY315621|ACACA|31|acetyl-CoA carboxylase alpha##AY315622|ACACA|31|acetyl-CoA carboxylase alpha##NM_198836|ACACA|31|acetyl-CoA carboxylase alpha##AK096966|C17orf78|284099|chromosome 17 open reading frame 78##BC034672|C17orf78|284099|chromosome 17 open reading frame 78##NM_173625|C17orf78|284099|chromosome 17 open reading frame 78	0.99866	CTCF.p2:23:0.999
chr2	172667833	172667949	reg1017082.p1	7.532	+	TSC_hg19_v1_chr2_+_172544264 AK096579 AK075323 AF250307 BC109375 AF134477 AK316119 BC015038	-123600	+	TSC_hg19_v1_chr2_+_172543981 BX537412 AK055491 NM_001378 AK225759 BC091498 AY037160 AK308008 AK298561	-123867	+	TSC_hg19_v1_chr2_+_172379020 NM_001127383 NM_024843 AK128495 AK316588 AL136693 BC016900 AK291731 AK027115 AK225459 BC065290 HQ257890	-288936	+	AB527259 DQ891540 EU176607 TSC_hg19_v1_chr2_-_172750755 AK091071 BC016932 AJ496568 Y14494 AK022828 AK294638 NM_003705	82892	-	TSC_hg19_v1_chr2_+_172778944 NM_003642 AK313699 BC063003	111041	+	TSC_hg19_v1_chr2_+_172778970 AK309001	111075	+	AK096579|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK075323|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF250307|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC109375|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF134477|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK316119|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC015038|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BX537412|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK055491|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##NM_001378|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK225759|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC091498|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AY037160|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK308008|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK298561|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##NM_001127383|CYBRD1|79901|cytochrome b reductase 1##NM_024843|CYBRD1|79901|cytochrome b reductase 1##AK128495|CYBRD1|79901|cytochrome b reductase 1##AK316588|CYBRD1|79901|cytochrome b reductase 1##AL136693|CYBRD1|79901|cytochrome b reductase 1##BC016900|CYBRD1|79901|cytochrome b reductase 1##AK291731|CYBRD1|79901|cytochrome b reductase 1##AK027115|CYBRD1|79901|cytochrome b reductase 1##AK225459|CYBRD1|79901|cytochrome b reductase 1##BC065290|CYBRD1|79901|cytochrome b reductase 1##HQ257890|CYBRD1|79901|cytochrome b reductase 1##DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##NM_003642|HAT1|8520|histone acetyltransferase 1##AK313699|HAT1|8520|histone acetyltransferase 1##BC063003|HAT1|8520|histone acetyltransferase 1##AK309001|HAT1|8520|histone acetyltransferase 1	0.939776	CTCF.p2:-22:0.940
chr2	39740897	39741032	reg1020632.p1	7.532	+	TSC_hg19_v1_chr2_+_39664565 AK095178	-76394	+	TSC_hg19_v1_chr2_-_39664438 BC071579	-76496	-	TSC_hg19_v1_chr2_-_39664420 AK291467	-76578	-	NM_001167959	151673	+	TSC_hg19_v1_chr2_+_39893056 NM_152390 AK075440 BC029530 AY358773 DQ890996	152103	+	TSC_hg19_v1_chr2_-_40006399 CU678598 EU831465 EU831552 AK301353 AK298178 AK226034 BC004163 BC013299 AK307754 AL832115 AK093580 AX748213 AK292002	265330	-	AK095178|LOC728730|728730|uncharacterized LOC728730##BC071579|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##AK291467|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##NM_001167959|TMEM178|130733|transmembrane protein 178##NM_152390|TMEM178|130733|transmembrane protein 178##AK075440|TMEM178|130733|transmembrane protein 178##BC029530|TMEM178|130733|transmembrane protein 178##AY358773|TMEM178|130733|transmembrane protein 178##DQ890996|TMEM178|130733|transmembrane protein 178##EU831465|THUMPD2|80745|THUMP domain containing 2##EU831552|THUMPD2|80745|THUMP domain containing 2##AK301353|THUMPD2|80745|THUMP domain containing 2##AK298178|THUMPD2|80745|THUMP domain containing 2##AK226034|THUMPD2|80745|THUMP domain containing 2##BC004163|THUMPD2|80745|THUMP domain containing 2##BC013299|THUMPD2|80745|THUMP domain containing 2##AK307754|THUMPD2|80745|THUMP domain containing 2##AL832115|THUMPD2|80745|THUMP domain containing 2##AK093580|THUMPD2|80745|THUMP domain containing 2##AK292002|THUMPD2|80745|THUMP domain containing 2	0.956827	CTCF.p2:11:0.957
chr5	138161095	138161206	reg1018232.p1	7.532	+	TSC_hg19_v1_chr5_+_138089137 AK094151 D13866 BC000385 AK304267	-72019	+	TSC_hg19_v1_chr5_+_138089107 NM_001903 AK296708 AK300439 D14705	-72056	+	NM_004134	-249833	-	AK309790 TSC_hg19_v1_chr5_-_138211025 AB007876 BC028172 AK291064 AK297332	49863	-	TSC_hg19_v1_chr5_-_138211057 NM_015564	49909	-	HQ589335 TSC_hg19_v1_chr5_+_138211097	49941	+	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##NM_004134|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##HQ589335|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	0.998629	CTCF.p2:4:0.999
chrX	51230635	51230782	reg1017936.p1	7.532	+	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	-155005	+	AF469196 NM_153183	-155626	+	BC117264 BC117266 NM_005448 BC069155 HQ258214	-576950	+	AB528198 AM392606 AK001490 TSC_hg19_v1_chrX_-_51239368	8624	-	BC009942 TSC_hg19_v1_chrX_-_51239444 NM_018159	8734	-	TSC_hg19_v1_chrX_+_51486493 NM_018094 AK225671 BC036077 AK298868 AK023155 AK001303	255803	+	AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AM392606|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK001490|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##BC009942|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018159|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018094|GSPT2|23708|G1 to S phase transition 2##BC036077|GSPT2|23708|G1 to S phase transition 2##AK298868|GSPT2|23708|G1 to S phase transition 2##AK023155|GSPT2|23708|G1 to S phase transition 2##AK001303|GSPT2|23708|G1 to S phase transition 2	0.231101	CTCF.p2:-13:0.231
chr12	103575334	103575514	reg1014049.p1	7.531	+	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-223332	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-223903	+	L47726 NM_000277 U49897	-264044	-	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	314322	-	AY311388 AJ295695 NM_017564 AB052958	405637	+	AB032773 TSC_hg19_v1_chr12_-_104234857	659400	-	DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3	0.0	
chr17	42281137	42281280	reg1021376.p1	7.531	+	TSC_hg19_v1_chr17_-_42277350 AK296689	-3823	-	BC037418 HQ258188 TSC_hg19_v1_chr17_-_42275499 BC113595 BC126113 NM_001098833 NM_020218	-5732	-	TSC_hg19_v1_chr17_+_42264588 AF370373	-16591	+	AK291733 TSC_hg19_v1_chr17_-_42296871	15670	-	X56687 TSC_hg19_v1_chr17_-_42296940	15724	-	TSC_hg19_v1_chr17_-_42297051 NM_001076684 NM_014233	15836	-	AK296689|ATXN7L3|56970|ataxin 7-like 3##BC037418|ATXN7L3|56970|ataxin 7-like 3##HQ258188|ATXN7L3|56970|ataxin 7-like 3##BC113595|ATXN7L3|56970|ataxin 7-like 3##BC126113|ATXN7L3|56970|ataxin 7-like 3##NM_001098833|ATXN7L3|56970|ataxin 7-like 3##NM_020218|ATXN7L3|56970|ataxin 7-like 3##AF370373|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2##AK291733|UBTF|7343|upstream binding transcription factor, RNA polymerase I##X56687|UBTF|7343|upstream binding transcription factor, RNA polymerase I##NM_001076684|UBTF|7343|upstream binding transcription factor, RNA polymerase I##NM_014233|UBTF|7343|upstream binding transcription factor, RNA polymerase I	0.065269	
chr3	3221386	3221542	reg1020155.p1	7.531	+	TSC_hg19_v1_chr3_-_3221401 NM_001173482 NM_016302	-63	-	TSC_hg19_v1_chr3_-_3221386 AK301423	-78	-	TSC_hg19_v1_chr3_-_3221376 AF117230 CU675978 CU688352 AK058191 BC059171 CR627060 AK027507 AK312577 BC017419 BC067811	-92	-	TSC_hg19_v1_chr3_+_3841114 NM_020873	619635	+	AK307537 NM_001243723 NM_006515 TSC_hg19_v1_chr3_+_4345015	1123544	+	TSC_hg19_v1_chr3_+_4345048 AK222734 AK297865 AK302296 AB590082 AF054989 BC011635 BC008931 U80776 AY952295 CU679994	1123599	+	NM_001173482|CRBN|51185|cereblon##NM_016302|CRBN|51185|cereblon##AK301423|CRBN|51185|cereblon##AF117230|CRBN|51185|cereblon##AK058191|CRBN|51185|cereblon##BC059171|CRBN|51185|cereblon##CR627060|CRBN|51185|cereblon##AK027507|CRBN|51185|cereblon##AK312577|CRBN|51185|cereblon##BC017419|CRBN|51185|cereblon##BC067811|CRBN|51185|cereblon##NM_020873|LRRN1|57633|leucine rich repeat neuronal 1##AK307537|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_001243723|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_006515|SETMAR|6419|SET domain and mariner transposase fusion gene##AK222734|SETMAR|6419|SET domain and mariner transposase fusion gene##AK297865|SETMAR|6419|SET domain and mariner transposase fusion gene##AK302296|SETMAR|6419|SET domain and mariner transposase fusion gene##AF054989|SETMAR|6419|SET domain and mariner transposase fusion gene##BC011635|SETMAR|6419|SET domain and mariner transposase fusion gene##BC008931|SETMAR|6419|SET domain and mariner transposase fusion gene##U80776|SETMAR|6419|SET domain and mariner transposase fusion gene##AY952295|SETMAR|6419|SET domain and mariner transposase fusion gene	0.996116	CTCF.p2:8:0.996
chr11	43441043	43441177	reg1020844.p1	7.530	+	TSC_hg19_v1_chr11_+_43380492 AK001752 BC017238 BC033000	-60618	+	TSC_hg19_v1_chr11_+_43380403 NM_018259	-60692	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	-107470	+	TSC_hg19_v1_chr11_+_43665785 AK095484	224674	+	NM_016142 TSC_hg19_v1_chr11_+_43702287 AK027882 AK075011 AK292625 AK075216 AK074952 AF078850 BC012043 AK222881 AK301663 BC012536 EU176708	261148	+	TSC_hg19_v1_chr11_+_43902380 NM_139178 AK315266 AB042029 BC067257	461283	+	AK001752|TTC17|55761|tetratricopeptide repeat domain 17##BC017238|TTC17|55761|tetratricopeptide repeat domain 17##BC033000|TTC17|55761|tetratricopeptide repeat domain 17##NM_018259|TTC17|55761|tetratricopeptide repeat domain 17##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5##NM_016142|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK027882|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075011|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK292625|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075216|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK074952|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AF078850|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012043|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK222881|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK301663|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012536|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##EU176708|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##NM_139178|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AK315266|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AB042029|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##BC067257|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)	0.863839	CTCF.p2:-8:0.864
chr15	64502081	64502227	reg1015846.p1	7.530	+	TSC_hg19_v1_chr15_-_64455365 BC008848 NM_000942	-46808	-	TSC_hg19_v1_chr15_-_64455219 BC032138 BC020800 AK291149 D28465	-46939	-	TSC_hg19_v1_chr15_-_64455190 BC001125 M63573 AK311074	-46957	-	BC130613 BC136504 AL832551 TSC_hg19_v1_chr15_-_64648283	146114	-	TSC_hg19_v1_chr15_-_64648373 AK225960 NM_022048	146246	-	AF529370 AY598324 AB463081 CU675545 BC005832 D14657 BC007101 TSC_hg19_v1_chr15_-_64673641 AK290748 BC016782 NM_001029989 NM_014736	171481	-	BC008848|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##NM_000942|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##BC032138|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##BC020800|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##AK291149|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##D28465|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##BC001125|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##M63573|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##AK311074|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##BC130613|CSNK1G1|53944|casein kinase 1, gamma 1##BC136504|CSNK1G1|53944|casein kinase 1, gamma 1##AL832551|CSNK1G1|53944|casein kinase 1, gamma 1##AK225960|CSNK1G1|53944|casein kinase 1, gamma 1##NM_022048|CSNK1G1|53944|casein kinase 1, gamma 1##AF529370|KIAA0101|9768|KIAA0101##AY598324|KIAA0101|9768|KIAA0101##BC005832|KIAA0101|9768|KIAA0101##D14657|KIAA0101|9768|KIAA0101##BC007101|KIAA0101|9768|KIAA0101##AK290748|KIAA0101|9768|KIAA0101##BC016782|KIAA0101|9768|KIAA0101##NM_001029989|KIAA0101|9768|KIAA0101##NM_014736|KIAA0101|9768|KIAA0101	0.511954	CTCF.p2:-41:0.512
chr16	710775	710902	reg1010452.p1	7.530	+	TSC_hg19_v1_chr16_+_699362 AB067511 BC121185 BC121186 AK091062 AX746759 NM_145294	-11459	+	TSC_hg19_v1_chr16_+_691949 BC007346 BC111391	-18903	+	TSC_hg19_v1_chr16_+_691832 BC001912 NM_138418	-19001	+	TSC_hg19_v1_chr16_+_718131 NM_138769 AY207375 AK308984 BC014942 AL834163	7269	+	TSC_hg19_v1_chr16_+_718165 AK024450 AJ517413	7340	+	TSC_hg19_v1_chr16_+_725686 AJ272344 AK294136	14862	+	AB067511|WDR90|197335|WD repeat domain 90##BC121185|WDR90|197335|WD repeat domain 90##BC121186|WDR90|197335|WD repeat domain 90##AK091062|WDR90|197335|WD repeat domain 90##NM_145294|WDR90|197335|WD repeat domain 90##BC007346|FAM195A|84331|family with sequence similarity 195, member A##BC111391|FAM195A|84331|family with sequence similarity 195, member A##BC001912|FAM195A|84331|family with sequence similarity 195, member A##NM_138418|FAM195A|84331|family with sequence similarity 195, member A##NM_138769|RHOT2|89941|ras homolog gene family, member T2##AY207375|RHOT2|89941|ras homolog gene family, member T2##AK308984|RHOT2|89941|ras homolog gene family, member T2##BC014942|RHOT2|89941|ras homolog gene family, member T2##AL834163|RHOT2|89941|ras homolog gene family, member T2##AK024450|RHOT2|89941|ras homolog gene family, member T2##AJ517413|RHOT2|89941|ras homolog gene family, member T2##AJ272344|RHBDL1|9028|rhomboid, veinlet-like 1 (Drosophila)##AK294136|RHBDL1|9028|rhomboid, veinlet-like 1 (Drosophila)	0.012764	
chr20	13752586	13752720	reg1019947.p1	7.530	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	-133089	-	NM_080826 TSC_hg19_v1_chr20_+_13202422	-550230	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	-763012	+	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	12888	-	TSC_hg19_v1_chr20_+_13765698 NM_001039375 NM_024120 AK289781 AK091060 AX746757 BC073158 CU687252 BC005984	13100	+	BC035741 AK302170 NM_025229	218605	-	BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_001039375|C20orf7|79133|chromosome 20 open reading frame 7##NM_024120|C20orf7|79133|chromosome 20 open reading frame 7##AK289781|C20orf7|79133|chromosome 20 open reading frame 7##AK091060|C20orf7|79133|chromosome 20 open reading frame 7##BC073158|C20orf7|79133|chromosome 20 open reading frame 7##BC005984|C20orf7|79133|chromosome 20 open reading frame 7##BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)	0.97937	CTCF.p2:39:0.979
chr20	17999874	17999991	reg1017831.p2	7.530	+	TSC_hg19_v1_chr20_+_17949742 AF306686 AK315532 AF306684 AF306685 AK027503 BC016869 NM_052865	-50270	+	TSC_hg19_v1_chr20_-_17949438 BC002724 BC062638 BC064555 BC073171 AK123903 AK308017 AK296947 BC000100 AF121855 NM_152227	-50492	-	BT007191 AB464237 TSC_hg19_v1_chr20_-_17949155 AK223308 AK001793 AK129505 NM_014426 BC093623 BC093980 BC143274	-50718	-	AK022284 NM_021220 BC006148	38590	-	TSC_hg19_v1_chr20_+_18118516 NM_001164811 AY358666	118600	+	NM_020536 BC007537	122983	+	AF306686|C20orf72|92667|chromosome 20 open reading frame 72##AK315532|C20orf72|92667|chromosome 20 open reading frame 72##AF306684|C20orf72|92667|chromosome 20 open reading frame 72##AF306685|C20orf72|92667|chromosome 20 open reading frame 72##AK027503|C20orf72|92667|chromosome 20 open reading frame 72##BC016869|C20orf72|92667|chromosome 20 open reading frame 72##NM_052865|C20orf72|92667|chromosome 20 open reading frame 72##BC002724|SNX5|27131|sorting nexin 5##BC062638|SNX5|27131|sorting nexin 5##AK123903|SNX5|27131|sorting nexin 5##AK308017|SNX5|27131|sorting nexin 5##AK296947|SNX5|27131|sorting nexin 5##BC000100|SNX5|27131|sorting nexin 5##AF121855|SNX5|27131|sorting nexin 5##NM_152227|SNX5|27131|sorting nexin 5##BT007191|SNX5|27131|sorting nexin 5##AK223308|SNX5|27131|sorting nexin 5##AK001793|SNX5|27131|sorting nexin 5##AK129505|SNX5|27131|sorting nexin 5##NM_014426|SNX5|27131|sorting nexin 5##BC093623|SNX5|27131|sorting nexin 5##BC093980|SNX5|27131|sorting nexin 5##BC143274|SNX5|27131|sorting nexin 5##AK022284|OVOL2|58495|ovo-like 2 (Drosophila)##NM_021220|OVOL2|58495|ovo-like 2 (Drosophila)##BC006148|OVOL2|58495|ovo-like 2 (Drosophila)##NM_001164811|PET117|100303755|cytochrome c oxidase assembly factor-like##AY358666|PET117|100303755|cytochrome c oxidase assembly factor-like##NM_020536|CSRP2BP|57325|CSRP2 binding protein##BC007537|CSRP2BP|57325|CSRP2 binding protein	0.376764	CTCF.p2:14:0.377
chr1	24181176	24181288	reg1016365.p1	7.529	+	TSC_hg19_v1_chr1_-_24151934 NM_000191 NM_001166059	-29284	-	TSC_hg19_v1_chr1_-_24151929 BC021145 BT009792 CR456884 CU679747 DQ892083 DQ895276 L07033 BC010570 AK309129 AK300733 AK313869	-29345	-	TSC_hg19_v1_chr1_-_24127245 BC056880 BC001273 BC050685 AK096127 AK307354 AK057302 NM_001008216	-53990	-	CU675950 TSC_hg19_v1_chr1_-_24194781 M29877 AB074175 AK092914 AK095443 AK095455 AK225468 AK301302 AK310143 AK314649 AX747804 BC017338 AK295535 NM_000147	13577	-	BC069722 NM_001841 X74328 FJ357036	58572	-	NM_017761 TSC_hg19_v1_chr1_+_24286310	105073	+	NM_000191|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_001166059|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##BC021145|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##BT009792|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##CR456884|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##DQ892083|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##DQ895276|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##L07033|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##BC010570|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##AK309129|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##AK300733|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##AK313869|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##BC056880|GALE|2582|UDP-galactose-4-epimerase##BC001273|GALE|2582|UDP-galactose-4-epimerase##BC050685|GALE|2582|UDP-galactose-4-epimerase##AK096127|GALE|2582|UDP-galactose-4-epimerase##AK307354|GALE|2582|UDP-galactose-4-epimerase##AK057302|GALE|2582|UDP-galactose-4-epimerase##NM_001008216|GALE|2582|UDP-galactose-4-epimerase##M29877|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AB074175|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK092914|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095443|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095455|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK225468|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK301302|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK310143|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK314649|FUCA1|2517|fucosidase, alpha-L- 1, tissue##BC017338|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK295535|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000147|FUCA1|2517|fucosidase, alpha-L- 1, tissue##BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)##NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)##X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)##NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2	0.751077	CTCF.p2:21:0.751
chr12	98726497	98726660	reg1019867.p1	7.529	+	BC027605 NM_001135175	-1425335	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-1425547	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-1932261	-	TSC_hg19_v1_chr12_-_98897622 AK126817	171049	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	182789	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	182829	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.581858	CTCF.p2:44:0.582
chr14	39336886	39337020	reg1018087.p2	7.529	+	AY358395 BX248017 NM_175060	-611397	-	AY573061 BC031567 TSC_hg19_v1_chr14_-_38725270 AY606132	-611669	-	AB384936 DQ893328 DQ896644 TSC_hg19_v1_chr14_+_38678642	-658334	+	AK293944 TSC_hg19_v1_chr14_-_39572386 AK312259 X97064	235391	-	TSC_hg19_v1_chr14_-_39572440 AK299862 BC036649 NM_006364 AK303485	235480	-	AF027150 NM_001009182 NM_001009183 NM_003616 BC028095 BC104968 AK313947 AB037701 AB037702 AB037703	246514	+	AY358395|CLEC14A|161198|C-type lectin domain family 14, member A##BX248017|CLEC14A|161198|C-type lectin domain family 14, member A##NM_175060|CLEC14A|161198|C-type lectin domain family 14, member A##AY573061|CLEC14A|161198|C-type lectin domain family 14, member A##BC031567|CLEC14A|161198|C-type lectin domain family 14, member A##AY606132|CLEC14A|161198|C-type lectin domain family 14, member A##DQ893328|SSTR1|6751|somatostatin receptor 1##DQ896644|SSTR1|6751|somatostatin receptor 1##AK293944|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK312259|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##X97064|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK299862|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##BC036649|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##NM_006364|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK303485|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AF027150|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_001009182|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_001009183|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_003616|GEMIN2|8487|gem (nuclear organelle) associated protein 2##BC028095|GEMIN2|8487|gem (nuclear organelle) associated protein 2##BC104968|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AK313947|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037701|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037702|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037703|GEMIN2|8487|gem (nuclear organelle) associated protein 2	0.998873	CTCF.p2:0:0.999
chr19	31160473	31160596	reg1018102.p1	7.529	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	-297154	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	-727252	+	BC026184 NM_001252641	-745984	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	679813	-	FJ211597 NM_001205273	922652	+	TSC_hg19_v1_chr19_+_32836524 NM_001136156 NM_014910 AK292526 AB029007 BX640881 BC136417 AL713775	1676028	+	BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5##NM_001136156|ZNF507|22847|zinc finger protein 507##NM_014910|ZNF507|22847|zinc finger protein 507##AK292526|ZNF507|22847|zinc finger protein 507##AB029007|ZNF507|22847|zinc finger protein 507##BX640881|ZNF507|22847|zinc finger protein 507##BC136417|ZNF507|22847|zinc finger protein 507##AL713775|ZNF507|22847|zinc finger protein 507	0.994397	CTCF.p2:-7:0.994
chr4	165834791	165834909	reg1015963.p1	7.529	+	AK289711 NM_001166373	-530444	-	NM_012403	-715988	-	AB463878 AK000675 AK301408 NM_017923	-1300135	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	43252	+	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	43301	+	BC089393 NM_001012414	63967	-	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61	0.0	
chr4	65647584	65647715	reg1020519.p1	7.529	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	-372553	-	NM_015236	-3284811	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-3580674	+	AK307826 NM_004439 NM_182472	888003	-	TSC_hg19_v1_chr4_-_66536182 AB209375	888548	-	CU688992 TSC_hg19_v1_chr4_-_68411171	2763474	-	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.939671	CTCF.p2:-2:0.940
chr5	4868399	4868517	reg1016736.p2	7.529	+	AY335938 NM_024337	-1272291	+	AY249325 NM_178569 BC101608 BC101634 BC143638 BC143639 BC143640 BC171731	-2116157	+	AB188492 NM_001134222 NM_033267 BC065189	-2116687	-	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	272053	+	TSC_hg19_v1_chr5_+_5422777 AK126937	554317	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	554451	+	AY335938|IRX1|79192|iroquois homeobox 1##NM_024337|IRX1|79192|iroquois homeobox 1##AY249325|C5orf38|153571|chromosome 5 open reading frame 38##NM_178569|C5orf38|153571|chromosome 5 open reading frame 38##BC101608|C5orf38|153571|chromosome 5 open reading frame 38##BC101634|C5orf38|153571|chromosome 5 open reading frame 38##BC143638|C5orf38|153571|chromosome 5 open reading frame 38##BC143639|C5orf38|153571|chromosome 5 open reading frame 38##BC143640|C5orf38|153571|chromosome 5 open reading frame 38##BC171731|C5orf38|153571|chromosome 5 open reading frame 38##AB188492|IRX2|153572|iroquois homeobox 2##NM_001134222|IRX2|153572|iroquois homeobox 2##NM_033267|IRX2|153572|iroquois homeobox 2##BC065189|IRX2|153572|iroquois homeobox 2##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947	0.998948	CTCF.p2:-12:0.999
chr1	162246425	162246539	reg1018590.p1	7.528	+	TSC_hg19_v1_chr1_+_162039485 BC041382 AB007933 NM_001164757 NM_014697	-206958	+	AK316154 BC067274 NM_015441 TSC_hg19_v1_chr1_-_161993687	-252846	-	TSC_hg19_v1_chr1_+_161736145 BC014969 BC071997 AB208929 CU677145	-510346	+	AY841899 NM_001126060	86290	+	AB463503 CU689584 AY248900 BC032957 NM_182581	100129	-	AK293907 NM_001135240	102213	+	BC041382|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AB007933|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_001164757|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_014697|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AK316154|OLFML2B|25903|olfactomedin-like 2B##BC067274|OLFML2B|25903|olfactomedin-like 2B##NM_015441|OLFML2B|25903|olfactomedin-like 2B##BC014969|ATF6|22926|activating transcription factor 6##BC071997|ATF6|22926|activating transcription factor 6##AB208929|ATF6|22926|activating transcription factor 6##AY841899|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_001126060|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AY248900|C1orf111|284680|chromosome 1 open reading frame 111##BC032957|C1orf111|284680|chromosome 1 open reading frame 111##NM_182581|C1orf111|284680|chromosome 1 open reading frame 111##AK293907|C1orf226|400793|chromosome 1 open reading frame 226##NM_001135240|C1orf226|400793|chromosome 1 open reading frame 226	0.940517	CTCF.p2:13:0.941
chr6_cox_hap2	2877524	2877636	reg1018754.p1	7.528	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.99593	CTCF.p2:-1:0.996
chr1	202104459	202104558	reg1018480.p1	7.527	+	AK295576 AK313044 TSC_hg19_v1_chr1_+_202092044 BC050334 NM_004767 AK222639 Y16280	-12491	+	U66894 TSC_hg19_v1_chr1_+_201979752 AK225446 AF517841	-124724	+	NM_001114309 NM_004433 TSC_hg19_v1_chr1_+_201979714 AK309265 AK312273 U97156 BC003569 U73843 U73844 AF016295	-124800	+	CU677299 AB118752 TSC_hg19_v1_chr1_-_202113832 BC015408 AK127138 AK313122	9266	-	TSC_hg19_v1_chr1_-_202113866 NM_138795	9352	-	BC001746 NM_080588	24610	-	AK295576|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK313044|GPR37L1|9283|G protein-coupled receptor 37 like 1##BC050334|GPR37L1|9283|G protein-coupled receptor 37 like 1##NM_004767|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK222639|GPR37L1|9283|G protein-coupled receptor 37 like 1##Y16280|GPR37L1|9283|G protein-coupled receptor 37 like 1##U66894|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK225446|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF517841|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##NM_001114309|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##NM_004433|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK309265|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK312273|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U97156|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##BC003569|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73843|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73844|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF016295|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AB118752|ARL8A|127829|ADP-ribosylation factor-like 8A##BC015408|ARL8A|127829|ADP-ribosylation factor-like 8A##AK127138|ARL8A|127829|ADP-ribosylation factor-like 8A##AK313122|ARL8A|127829|ADP-ribosylation factor-like 8A##NM_138795|ARL8A|127829|ADP-ribosylation factor-like 8A##BC001746|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_080588|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7	0.713919	CTCF.p2:-18:0.714
chr14	56889436	56889565	reg1018204.p2	7.527	+	TSC_hg19_v1_chr14_+_56585163 AF302502	-304326	+	TSC_hg19_v1_chr14_+_56585131 BC009476 NM_021255 AK315727	-304506	+	L25616 TSC_hg19_v1_chr14_+_56078737 AB527439	-810751	+	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	157045	+	NM_172337 AB593056	382863	-	AK314271 BC032579 NM_021728 AB593058	387644	-	AF302502|PELI2|57161|pellino homolog 2 (Drosophila)##BC009476|PELI2|57161|pellino homolog 2 (Drosophila)##NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)##AK315727|PELI2|57161|pellino homolog 2 (Drosophila)##L25616|KTN1|3895|kinectin 1 (kinesin receptor)##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101##NM_172337|OTX2|5015|orthodenticle homeobox 2##AB593056|OTX2|5015|orthodenticle homeobox 2##AK314271|OTX2|5015|orthodenticle homeobox 2##BC032579|OTX2|5015|orthodenticle homeobox 2##NM_021728|OTX2|5015|orthodenticle homeobox 2##AB593058|OTX2|5015|orthodenticle homeobox 2	0.771365	CTCF.p2:7:0.771
chr4	43884649	43884737	reg1016448.p1	7.527	+	AB528853 NM_001080476	-989412	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	-1225605	-	NM_001080505	-1484838	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	565860	-	AK123347 NM_198353	566130	-	AK096895 BC103995 BC103996 NM_182592	768964	-	NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7	0.013704	
chr10	7665043	7665162	reg1018660.p1	7.525	+	BC004282 NM_032817	-3478	-	AK027849 TSC_hg19_v1_chr10_-_7659249	-5885	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	-211668	-	AK027831 AB075833 TSC_hg19_v1_chr10_-_7682819	17678	-	AL833203 AY238437 AB384652 TSC_hg19_v1_chr10_-_7708928 AK027375 BC142961 AY358426 AK075381 BC136439 NM_001001851 NM_030569	43797	-	TSC_hg19_v1_chr10_+_7745278 NM_002216	80153	+	BC004282|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_032817|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027831|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AB075833|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AL833203|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AY238437|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK027375|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC142961|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AY358426|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK075381|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC136439|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_001001851|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_030569|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_002216|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2	0.019453	
chr14	106986485	106986665	reg1018427.p1	7.525	+	BX640710 TSC_hg19_v1_chr14_-_106967543 AK097354 AK097357 L22586 AK092384 AK125238 AX747511 AK125703 AK092976 AX747834 AK097028 L06610	-19008	-	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	-19275	-	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	-48117	+	GQ232968 DQ454715 DQ454740 DQ454804 FJ840179 GU552701 FJ840340 GQ232950 GQ232981 GU552754 DQ454538 DQ454540 DQ454585 DQ523858 GU552713 AY003858 DQ454386 DQ454541 DQ454621 DQ454676 GU552719 GU552720 GU552767 AY003800 EF566901 DQ454598 DQ454606 DQ454788 DQ455001 DQ454592 Z11947 FJ873823 FJ873826 FJ873839 FJ873846 FJ873864 FJ873876 FJ873933 FJ873992 HM116214 EF175393 AY003851 EF175424 EU350424 GU358679 JF810268 EU099085 EU099261 AY206990 AF103064 AM279530 HM996031 GQ903512 AF103334 AF062095 AF103183 AF103113 L07311 AF165109 AY062321 HM774774 JN110645 JN110658 JN110671 JN110688 JN110706 JN110718 FJ385349 HM774039 HM774378 HM774566 HM774910 HQ704000 HQ704008 HQ704009 AY062300 HM774238 HM775050 AF103319 AF194121 HM775049 DQ100804 EU146317 EU146347 EU146389 DQ100818 DQ100905 AJ006652 AF485463 AF485473 AY423189 AY423190 AY423196 AY423198 AY423199 AY423207 HM996483 AF103257 AY941883 DQ100909 AF006520 AJ249628 AY866746 DQ187712 DQ524024 GU570284 HM995016 HM995139 HM995190 HM995191 HM995236 HM995887 HM995889 HM995890 HM995891 HM995919 HM996054 HM996304 HM996511 AJ245323 AJ245324 DQ322799 DQ840839 DQ840841 DQ926120 DQ926247 DQ926326 AB374202 AF115123 AF174048 AJ245353 AJ245354 AJ245355 AJ278773 AY640567 AY866807 AY941926 AY944711 DQ100900 DQ100918 DQ926040 DQ926081 DQ926084 DQ926450 DQ926565 DQ926602 DQ926604 EU794403 Z18824 AB021525 AB063673 AB363090 AB363101 AB363126 AB363166 AF021949 AF021979 AF035023 AF052525 AF062215 AF062235 AF129457 AF174081 AF398962 AF408730 AF455546 AF455553 AF471175 AF471178 AF471201 AF471216 AF471265 AF471373 AF471475 AF471476 AF471477 AF471486 AF471490 AF471494 AF471528 AJ239363 AJ239370 AJ389190 AJ413993 AJ627249 AM040520 AM040566 AM259133 AM259134 AY466507 AY866733 AY866738 AY866759 AY866795 AY941854 AY941870 AY941906 AY941952 AY941974 AY941976 AY941980 AY962566 D83682 DQ065617 DQ205182 DQ212502 DQ212503 DQ535300 DQ535366 DQ535419 DQ535472 DQ926167 DQ926385 DQ926389 DQ926413 DQ926426 DQ926459 DQ926557 DQ926616 EF177950 EU549721 FJ492926 GQ903506 GU570336 GU570338 GU570341 HM152510 U00501 U77374 X59703 X87449 Z33898 Z96965 Z98722 AF283800 AJ519241 HM995874 AJ519332 L28051 AJ519250 AJ519294 AY392920 AY393056 L08082 AF062182 AF062206 AF062253 AF062285 AY190818 X81729 Z47218 TSC_hg19_v1_chr14_-_106994347 AK097076 AK097206 AK097859 AK126358 AK128664 AK130501 AK301358 BX640853 BX640854	7599	-	DQ187707 GU552700 GU552764 AY003783 EF175429 FJ694883 EU099078 EU099213 AM183990 EU099124 HM774924 HM774242 JN110729 JN110849 AF103239 FJ385422 FJ385433 HM773968 HM773995 HM774338 HM774389 HM774601 HM774867 HM996424 HQ704020 FJ385411 EU146318 JN110975 AF062300 AF062305 DQ524053 HM994912 HM994914 HM994916 HM994920 HM995673 HM995674 HM995675 HM995676 HM995783 HM995910 HM995945 HM996441 HM996522 AF062299 AF471505 DQ187607 DQ322806 DQ840692 DQ840693 DQ840702 DQ840814 AM279609 DQ926615 EF178081 X99992 AB063924 AB066892 AB066969 AB067011 AB067080 AB067263 AF394199 AF455925 AF459632 AF471500 AF471503 AF471504 AJ300805 AJ579185 AY055477 AY055483 AY640482 AY941852 D83692 DQ005278 DQ005282 DQ100801 DQ926649 GU570351 GU570352 GU570354 L12185 L12186 X64240 Y11898 Z96974 HM995768 AJ519245 AJ519224 AJ519230 AJ519233 AJ519246 AJ519249 AJ519251 AJ519253 AJ519255 HM995877 AJ519222 AJ519299 AY393054 AY393058 AY393158 AY393161 AY190818 Z36887 AY623427 X52894 BC090938 TSC_hg19_v1_chr14_-_107013458	26715	-	TSC_hg19_v1_chr14_-_107013478 AK093806 AK097303 AK125632 AK126320 AK129510 AX748317	26901	-	BX640710|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK097354|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097357|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK092384|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125238|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092976|IGHM|3507|immunoglobulin heavy constant mu##AK097028|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221##AF035023|IGHV3-48|28424|immunoglobulin heavy variable 3-48##AK097076|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097859|IGHM|3507|immunoglobulin heavy constant mu##AK128664|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130501|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640854|IGH@|3492|immunoglobulin heavy locus##AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	2.765162	CTCF.p2:4:0.978	CTCF.p2:81:0.788	CTCF.p2:-91:1.000
chr1	24718890	24719047	reg1006386.p3	7.524	+	AY231160 AY231161 NM_021180	-69439	+	AK074386 TSC_hg19_v1_chr1_+_24645958 AK315164 BC036890 NM_001195010	-72984	+	NM_198173 NM_198174 TSC_hg19_v1_chr1_+_24645846	-73140	+	TSC_hg19_v1_chr1_-_24740273 AK090659 AK299401 AX746563 BC035061 NM_001199013 NM_001199014 NM_178122	21254	-	BC040212 NM_001199012	22618	-	NM_020448 TSC_hg19_v1_chr1_+_24742291 AK312433 BX640883 BC012492 BC001265 BC063583 U90918	23335	+	AY231160|GRHL3|57822|grainyhead-like 3 (Drosophila)##AY231161|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_021180|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK074386|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK315164|GRHL3|57822|grainyhead-like 3 (Drosophila)##BC036890|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_001195010|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_198173|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_198174|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK299401|C1orf201|90529|chromosome 1 open reading frame 201##BC035061|C1orf201|90529|chromosome 1 open reading frame 201##NM_001199013|C1orf201|90529|chromosome 1 open reading frame 201##NM_001199014|C1orf201|90529|chromosome 1 open reading frame 201##NM_178122|C1orf201|90529|chromosome 1 open reading frame 201##BC040212|C1orf201|90529|chromosome 1 open reading frame 201##NM_001199012|C1orf201|90529|chromosome 1 open reading frame 201##NM_020448|NIPAL3|57185|NIPA-like domain containing 3##AK312433|NIPAL3|57185|NIPA-like domain containing 3##BX640883|NIPAL3|57185|NIPA-like domain containing 3##BC012492|NIPAL3|57185|NIPA-like domain containing 3##BC001265|NIPAL3|57185|NIPA-like domain containing 3##BC063583|NIPAL3|57185|NIPA-like domain containing 3##U90918|NIPAL3|57185|NIPA-like domain containing 3	0.286748	CTCF.p2:27:0.268
chr22	22326789	22326910	reg1018354.p1	7.524	+	TSC_hg19_v1_chr22_-_22307213 AK291628 NM_014634	-19618	-	TSC_hg19_v1_chr22_-_22307191 BC071989 BC013798 D13640 BC105599	-19650	-	TSC_hg19_v1_chr22_-_22221955 BC017832 NM_002745 NM_138957	-104879	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	10298	-	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	10337	-	TSC_hg19_v1_chr22_+_22385369 AF026922	58516	+	AK291628|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##NM_014634|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##BC071989|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##D13640|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##BC105599|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##BC017832|MAPK1|5594|mitogen-activated protein kinase 1##NM_002745|MAPK1|5594|mitogen-activated protein kinase 1##NM_138957|MAPK1|5594|mitogen-activated protein kinase 1##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta	0.999633	CTCF.p2:-3:1.000
chr9	137670844	137670952	reg1015670.p1	7.524	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	-137088	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	-137251	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-452498	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	101762	+	D83920 DQ891426 DQ894436 CR749452 BC020635 AK314867 NM_002003	138859	-	NM_014279 NM_006334 TSC_hg19_v1_chr9_+_137967133	296217	+	D90279|COL5A1|1289|collagen, type V, alpha 1##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D83920|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ891426|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ894436|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##CR749452|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##BC020635|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##AK314867|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_002003|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_014279|OLFM1|10439|olfactomedin 1##NM_006334|OLFM1|10439|olfactomedin 1	1.017534	CTCF.p2:21:1.000
chr9	21466075	21466182	reg1017506.p1	7.524	+	NM_024013 V00538 V00537 BC112300 BC112302 BC074928 BC074929 AB464595 CU686802 HQ258738 JN848523	-25649	+	K01900 NM_002170 BC104828 BC104830 V00545 V00550	-56988	+	AY255838 V00548 AB590747 CR541921 JN848522 BC074936 BC074937 BC104163 BC104164 M54886 V00544 V00549 NM_000605	-80802	-	AY358570 NM_176891	16183	-	AK124391 TSC_hg19_v1_chr9_-_21559834	93654	-	TSC_hg19_v1_chr9_+_21802647 AF109294 AY712791 NM_002451 U22233 L40432 AK300592 AK309365	336512	+	NM_024013|IFNA1|3439|interferon, alpha 1##V00538|IFNA1|3439|interferon, alpha 1##V00537|IFNA1|3439|interferon, alpha 1##BC112300|IFNA1|3439|interferon, alpha 1##BC112302|IFNA1|3439|interferon, alpha 1##BC074928|IFNA1|3439|interferon, alpha 1##BC074929|IFNA1|3439|interferon, alpha 1##HQ258738|IFNA1|3439|interferon, alpha 1##K01900|IFNA8|3445|interferon, alpha 8##NM_002170|IFNA8|3445|interferon, alpha 8##BC104828|IFNA8|3445|interferon, alpha 8##BC104830|IFNA8|3445|interferon, alpha 8##V00545|IFNA8|3445|interferon, alpha 8##V00550|IFNA8|3445|interferon, alpha 8##AY255838|IFNA2|3440|interferon, alpha 2##V00548|IFNA2|3440|interferon, alpha 2##CR541921|IFNA2|3440|interferon, alpha 2##BC074936|IFNA2|3440|interferon, alpha 2##BC074937|IFNA2|3440|interferon, alpha 2##BC104163|IFNA2|3440|interferon, alpha 2##BC104164|IFNA2|3440|interferon, alpha 2##M54886|IFNA2|3440|interferon, alpha 2##V00544|IFNA2|3440|interferon, alpha 2##V00549|IFNA2|3440|interferon, alpha 2##NM_000605|IFNA2|3440|interferon, alpha 2##AY358570|IFNE|338376|interferon, epsilon##NM_176891|IFNE|338376|interferon, epsilon##AK124391|MIR31HG|554202|MIR31 host gene (non-protein coding)##AF109294|MTAP|4507|methylthioadenosine phosphorylase##AY712791|MTAP|4507|methylthioadenosine phosphorylase##NM_002451|MTAP|4507|methylthioadenosine phosphorylase##U22233|MTAP|4507|methylthioadenosine phosphorylase##L40432|MTAP|4507|methylthioadenosine phosphorylase##AK300592|MTAP|4507|methylthioadenosine phosphorylase##AK309365|MTAP|4507|methylthioadenosine phosphorylase	0.991212	CTCF.p2:-14:0.991
chr10	15476218	15476315	reg1017229.p2	7.523	+	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	-63117	-	BT007024 CU675371 DQ890667 DQ893848 BC006376 AK315085 AK094904 AF043325 TSC_hg19_v1_chr10_-_15210693 NM_004808	-265605	-	BC157831 BC171823 TSC_hg19_v1_chr10_-_15197364	-278911	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	285527	-	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	426225	-	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	1002719	+	AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##BT007024|NMT2|9397|N-myristoyltransferase 2##DQ890667|NMT2|9397|N-myristoyltransferase 2##DQ893848|NMT2|9397|N-myristoyltransferase 2##BC006376|NMT2|9397|N-myristoyltransferase 2##AK315085|NMT2|9397|N-myristoyltransferase 2##AK094904|NMT2|9397|N-myristoyltransferase 2##AF043325|NMT2|9397|N-myristoyltransferase 2##NM_004808|NMT2|9397|N-myristoyltransferase 2##BC157831|LOC100192204|100192204|peptidylprolyl isomerase A (cyclophilin A) pseudogene##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related	0.999876	CTCF.p2:-11:1.000
chr8	145296637	145296769	reg1022416.p1	7.523	+	AK295740 NM_001099280 NM_001099281 NM_032450 AK093563 AX748203 BC057824 BC067855 BC092486	-93775	+	BC003035 BC009915 NM_016458 AK098226 BC015471	-104008	+	TSC_hg19_v1_chr8_+_145159398 BC031273 BC018714 BC014082 AL136937	-137290	+	AX721087 NM_001008271 NM_001080514	24786	+	BC003035 BC009915 NM_016458 AK098226 BC015471	141200	+	AX721087 NM_001008271 NM_001080514	193872	+	AK295740|HEATR7A|727957|HEAT repeat containing 7A##NM_001099280|HEATR7A|727957|HEAT repeat containing 7A##NM_001099281|HEATR7A|727957|HEAT repeat containing 7A##NM_032450|HEATR7A|727957|HEAT repeat containing 7A##AK093563|HEATR7A|727957|HEAT repeat containing 7A##BC057824|HEATR7A|727957|HEAT repeat containing 7A##BC067855|HEATR7A|727957|HEAT repeat containing 7A##BC092486|HEATR7A|727957|HEAT repeat containing 7A##BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##BC031273|MAF1|84232|MAF1 homolog (S. cerevisiae)##BC018714|MAF1|84232|MAF1 homolog (S. cerevisiae)##BC014082|MAF1|84232|MAF1 homolog (S. cerevisiae)##AL136937|MAF1|84232|MAF1 homolog (S. cerevisiae)##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)	0.998753	CTCF.p2:-1:0.999
chr9	2132636	2132766	reg1018506.p2	7.523	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-117405	+	AF130729 NM_181872	-1082092	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-1082331	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	489106	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	489373	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	489411	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.0	
chrX	113845606	113845737	reg1020932.p1	7.523	+	NM_000868 U49516 BC028688 AK295753 TSC_hg19_v1_chrX_+_113818558 M81778	-27099	+	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	-1761609	-	AB384557 AY987378 NM_001113490	-1779318	-	X95302 AK308523 GQ494004 U70981 AK291957 NM_000640 Y08768 AK309444	406503	-	NM_001145346 AK301904	578304	+	AB587552 TSC_hg19_v1_chrX_-_114468623 BC125223 BC125224 BX647193 NM_001243963 NM_020871	622948	-	NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2##GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2##U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2##Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_001145346|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##AK301904|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_001243963|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	0.99171	CTCF.p2:1:0.992
chr4	158913354	158913458	reg1017892.p1	7.522	+	NM_000826 NM_001083619 NM_001083620 BC028736 AL832605 TSC_hg19_v1_chr4_+_158141879 AB209567 BC010574 L20814	-771522	+	TSC_hg19_v1_chr4_+_157997314 NM_000824 NM_001166061 AF094754 BC032635 AK290617 BC022502 U33267 NM_001166060 AF094755	-915972	+	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	-1020847	-	AK096792 AK129723 TSC_hg19_v1_chr4_+_159091940	178527	+	AL834177 AB527363 AM392540 AM392704 TSC_hg19_v1_chr4_-_159092534	179115	-	TSC_hg19_v1_chr4_-_159093526 AL832589	180126	-	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##NM_000824|GLRB|2743|glycine receptor, beta##NM_001166061|GLRB|2743|glycine receptor, beta##AF094754|GLRB|2743|glycine receptor, beta##BC032635|GLRB|2743|glycine receptor, beta##AK290617|GLRB|2743|glycine receptor, beta##BC022502|GLRB|2743|glycine receptor, beta##U33267|GLRB|2743|glycine receptor, beta##NM_001166060|GLRB|2743|glycine receptor, beta##AF094755|GLRB|2743|glycine receptor, beta##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C##AK096792|LOC285505|285505|uncharacterized LOC285505##AK129723|LOC285505|285505|uncharacterized LOC285505##AL834177|FAM198B|51313|family with sequence similarity 198, member B##AM392540|FAM198B|51313|family with sequence similarity 198, member B##AM392704|FAM198B|51313|family with sequence similarity 198, member B##AL832589|FAM198B|51313|family with sequence similarity 198, member B	0.980185	CTCF.p2:-12:0.980
chr1	205242885	205243066	reg1000082.p2	7.521	+	AY358192 TSC_hg19_v1_chr1_+_205236667	-6341	+	AK293734 NM_001242925	-44917	+	TSC_hg19_v1_chr1_+_205197073 AB007950 NM_014858 AK131419	-45892	+	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	47868	-	BC036076 TSC_hg19_v1_chr1_-_205313311	70335	-	AK299227 AK001610 NM_018203 AK096590	83065	-	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK293734|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_001242925|TMCC2|9911|transmembrane and coiled-coil domain family 2##AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2##AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC036076|KLHDC8A|55220|kelch domain containing 8A##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A	0.037714	
chr17	55994616	55994730	reg1019643.p1	7.521	+	AK000746 NM_017949	-13924	-	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	-67269	-	AK093888 AX748353 NM_170721	-660300	+	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	38003	-	TSC_hg19_v1_chr17_+_56065413 AB593183	70801	+	AB464342 D28118 TSC_hg19_v1_chr17_-_56065593	70861	-	AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC056882|CUEDC1|404093|CUE domain containing 1##D28118|VEZF1|7716|vascular endothelial zinc finger 1	0.995968	CTCF.p2:-12:0.996
chr2	157912253	157912375	reg1017855.p1	7.521	+	TSC_hg19_v1_chr2_+_157292921 U12424 BC019874	-619360	+	TSC_hg19_v1_chr2_+_157292894 NM_000408 AK292817	-619448	+	TSC_hg19_v1_chr2_+_157292178 AB209399 U36310 AK299645	-620080	+	BC142676 BC142703 AY277591 NM_014568 AK292154 BC144211	201979	+	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	269970	-	NM_001009959 AK296477	271842	-	U12424|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC019874|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_000408|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK292817|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AB209399|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U36310|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK299645|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein	0.936086	CTCF.p2:16:0.936
chr22	42929031	42929158	reg1015755.p1	7.521	+	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	-13280	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	-13327	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	-100713	-	BC041802 AK294584 AL450314 NM_014509 AK295223 BC119650 BC119651 BC127635 BC127636 CR456455 AL589866 AL590118 AL590120 CU013005 CU013293	20852	+	AL157851 TSC_hg19_v1_chr22_-_42978018 BC014647 BC007736 BC053540 AK098201 BC143340	48958	-	TSC_hg19_v1_chr22_-_43010884 BC001488 AB385492 AY506562 CU013006 CU013294 CU676456 AK291774 AK303419 AB055760 BC056912 AL137743 BC049840 AL160111 AL160112 AK291623	81769	-	BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##AK294584|SERHL2|253190|serine hydrolase-like 2##AL450314|SERHL2|253190|serine hydrolase-like 2##NM_014509|SERHL2|253190|serine hydrolase-like 2##AK295223|SERHL2|253190|serine hydrolase-like 2##BC119650|SERHL2|253190|serine hydrolase-like 2##BC119651|SERHL2|253190|serine hydrolase-like 2##BC127635|SERHL2|253190|serine hydrolase-like 2##BC127636|SERHL2|253190|serine hydrolase-like 2##CR456455|SERHL2|253190|serine hydrolase-like 2##AL589866|SERHL2|253190|serine hydrolase-like 2##AL590118|SERHL2|253190|serine hydrolase-like 2##AL590120|SERHL2|253190|serine hydrolase-like 2##CU013005|SERHL2|253190|serine hydrolase-like 2##CU013293|SERHL2|253190|serine hydrolase-like 2##AL157851|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC014647|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC007736|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC053540|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##AK098201|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC143340|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC001488|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AY506562|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CU013006|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CU013294|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK291774|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK303419|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AB055760|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##BC056912|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL137743|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##BC049840|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL160111|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL160112|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK291623|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3	0.829566	CTCF.p2:-16:0.830
chr3	52716156	52716302	reg1017769.p1	7.521	+	AY281068 AF177387 AF225870 AF225871 AF225872 BC115009 BC115010 BC115011 BC116450 BC129934 BC129935 NM_018165 NM_181042	-2496	-	AK095910 BC017996 NM_001124767 TSC_hg19_v1_chr3_+_52570620	-145603	+	BC047747 TSC_hg19_v1_chr3_-_52569042 AK023995 NM_022908	-147173	-	TSC_hg19_v1_chr3_-_52719930 AF197569 NM_018313	3540	-	AF191018 NM_014366 NM_206825 NM_206826 TSC_hg19_v1_chr3_+_52720047 AK315484 AK027514 AK297634 AK027516 BC001024 AB463711 CU674504 EU831969 EU832062	3792	+	BC119670 BC119671 AK027517 NM_152932 AY358579	21387	-	AY281068|PBRM1|55193|polybromo 1##AF177387|PBRM1|55193|polybromo 1##AF225870|PBRM1|55193|polybromo 1##AF225871|PBRM1|55193|polybromo 1##AF225872|PBRM1|55193|polybromo 1##BC115009|PBRM1|55193|polybromo 1##BC115010|PBRM1|55193|polybromo 1##BC115011|PBRM1|55193|polybromo 1##BC116450|PBRM1|55193|polybromo 1##BC129934|PBRM1|55193|polybromo 1##BC129935|PBRM1|55193|polybromo 1##NM_018165|PBRM1|55193|polybromo 1##NM_181042|PBRM1|55193|polybromo 1##AK095910|C3orf78|440957|chromosome 3 open reading frame 78##BC017996|C3orf78|440957|chromosome 3 open reading frame 78##NM_001124767|C3orf78|440957|chromosome 3 open reading frame 78##BC047747|NT5DC2|64943|5'-nucleotidase domain containing 2##AK023995|NT5DC2|64943|5'-nucleotidase domain containing 2##NM_022908|NT5DC2|64943|5'-nucleotidase domain containing 2##AF197569|PBRM1|55193|polybromo 1##NM_018313|PBRM1|55193|polybromo 1##AF191018|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)##NM_014366|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)##NM_206825|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)##NM_206826|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)##AK315484|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)##AK027514|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)##AK027516|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)##BC001024|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)##EU831969|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)##EU832062|GNL3|26354|guanine nucleotide binding protein-like 3 (nucleolar)##BC119670|GLT8D1|55830|glycosyltransferase 8 domain containing 1##BC119671|GLT8D1|55830|glycosyltransferase 8 domain containing 1##AK027517|GLT8D1|55830|glycosyltransferase 8 domain containing 1##NM_152932|GLT8D1|55830|glycosyltransferase 8 domain containing 1##AY358579|GLT8D1|55830|glycosyltransferase 8 domain containing 1	0.0	
chr11	118481827	118481943	reg1018719.p1	7.520	+	NM_001144758 NM_001144759 TSC_hg19_v1_chr11_+_118478332 CR749783 BC098586 AB014538 AK295819 AL832373 AK074070 AK125783	-3508	+	AB094090 NM_015157	-4673	+	TSC_hg19_v1_chr11_+_118443146 X81197 BC080638 BC093636 BC093638	-38727	+	AK223140 AK309565 AK091981 AK223143 AX747289 BC109206 NM_007180 AB000824	68482	-	BC065007 TSC_hg19_v1_chr11_-_118661679 AK313244	179748	-	TSC_hg19_v1_chr11_-_118661835 D17532	179951	-	NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AB094090|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##NM_015157|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##X81197|ARCN1|372|archain 1##BC080638|ARCN1|372|archain 1##BC093636|ARCN1|372|archain 1##BC093638|ARCN1|372|archain 1##AK223140|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK309565|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK091981|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK223143|TREH|11181|trehalase (brush-border membrane glycoprotein)##BC109206|TREH|11181|trehalase (brush-border membrane glycoprotein)##NM_007180|TREH|11181|trehalase (brush-border membrane glycoprotein)##AB000824|TREH|11181|trehalase (brush-border membrane glycoprotein)##BC065007|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK313244|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##D17532|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	0.992337	CTCF.p2:-15:0.992
chr12	112849436	112849569	reg1018746.p2	7.520	+	TSC_hg19_v1_chr12_-_112847411 BC022444 X69391 BC004138 BC104824 BC104826 AK308680 NM_000970 NM_001024662	-2097	-	TSC_hg19_v1_chr12_-_112819755 NM_001109662	-29677	-	TSC_hg19_v1_chr12_-_112630525 AF174498	-218974	-	NM_002834 TSC_hg19_v1_chr12_+_112856698	7114	+	TSC_hg19_v1_chr12_+_112856714 BC008692 L08807	7225	+	TSC_hg19_v1_chr12_+_112856757 AK289854 D13540 L07527 X70766 L03535 AB384730	7333	+	BC022444|RPL6|6128|ribosomal protein L6##X69391|RPL6|6128|ribosomal protein L6##BC004138|RPL6|6128|ribosomal protein L6##BC104824|RPL6|6128|ribosomal protein L6##BC104826|RPL6|6128|ribosomal protein L6##NM_000970|RPL6|6128|ribosomal protein L6##NM_001024662|RPL6|6128|ribosomal protein L6##NM_001109662|C12orf51|283450|chromosome 12 open reading frame 51##AF174498|C12orf51|283450|chromosome 12 open reading frame 51##NM_002834|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##BC008692|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##L08807|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##AK289854|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##D13540|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##L07527|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##X70766|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##L03535|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11	0.0	
chr14	104367550	104367632	reg1013298.p1	7.520	+	BC136527 AJ318887 TSC_hg19_v1_chr14_-_104313913 BC035446 NM_015316	-53739	-	TSC_hg19_v1_chr14_+_104182144 NM_001198953 NM_024071 BC005999 AK057816 BC001130 AY395756 AK290519 BX248261	-185475	+	TSC_hg19_v1_chr14_-_104181759 AK022829 BC011725 BX161398 BC001036 AK023646 NM_001100118 NM_001100119 NM_005432	-185808	-	BX161388 TSC_hg19_v1_chr14_-_104387847 BC047289 BC063419 BC000429 BC001944	20254	-	AK310120 TSC_hg19_v1_chr14_-_104387867 AK309355 AK312099 AF054175 AK309499 DQ426862 NM_001127393 NM_004894	20288	-	TSC_hg19_v1_chr14_+_104394792 NM_153046	27192	+	BC136527|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##AJ318887|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##BC035446|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##NM_015316|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##NM_001198953|ZFYVE21|79038|zinc finger, FYVE domain containing 21##NM_024071|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BC005999|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK057816|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BC001130|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AY395756|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK290519|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BX248261|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK022829|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC011725|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BX161398|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC001036|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK023646|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100118|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100119|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_005432|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BX161388|C14orf2|9556|chromosome 14 open reading frame 2##BC047289|C14orf2|9556|chromosome 14 open reading frame 2##BC063419|C14orf2|9556|chromosome 14 open reading frame 2##BC000429|C14orf2|9556|chromosome 14 open reading frame 2##BC001944|C14orf2|9556|chromosome 14 open reading frame 2##AK310120|C14orf2|9556|chromosome 14 open reading frame 2##AK309355|C14orf2|9556|chromosome 14 open reading frame 2##AK312099|C14orf2|9556|chromosome 14 open reading frame 2##AF054175|C14orf2|9556|chromosome 14 open reading frame 2##AK309499|C14orf2|9556|chromosome 14 open reading frame 2##DQ426862|C14orf2|9556|chromosome 14 open reading frame 2##NM_001127393|C14orf2|9556|chromosome 14 open reading frame 2##NM_004894|C14orf2|9556|chromosome 14 open reading frame 2##NM_153046|TDRD9|122402|tudor domain containing 9	0.999771	CTCF.p2:-21:1.000
chr14	21604224	21604355	reg1018865.p1	7.520	+	TSC_hg19_v1_chr14_-_21572798 NM_001102454	-31464	-	AK056849 TSC_hg19_v1_chr14_-_21572428	-31888	-	AK225811 AK290700 NM_001101672	-37169	-	NM_001004731 BC137304 BC137305	19913	-	M16342 BC108658 BX247992 BC089438 BC008364 TSC_hg19_v1_chr14_-_21737587 BC003394 BC071943 BX247961 M29063 AB209527 AK223517 BC066932 AK298906 AK312382 D28382 AK297482 AK299923 AK312338 BC103758 AK292619 BC007052 BC008423 AL833432 BC092433 AK225032 AK302213 NM_001077442 NM_001077443 NM_004500 NM_031314	133282	-	AJ417067 NM_020366	151846	+	NM_001102454|ZNF219|51222|zinc finger protein 219##AK225811|ZNF219|51222|zinc finger protein 219##AK290700|ZNF219|51222|zinc finger protein 219##NM_001101672|ZNF219|51222|zinc finger protein 219##NM_001004731|OR5AU1|390445|olfactory receptor, family 5, subfamily AU, member 1##BC137304|OR5AU1|390445|olfactory receptor, family 5, subfamily AU, member 1##BC137305|OR5AU1|390445|olfactory receptor, family 5, subfamily AU, member 1##M16342|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC108658|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BX247992|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC089438|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC008364|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC003394|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC071943|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BX247961|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##M29063|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AB209527|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK223517|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC066932|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK298906|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK312382|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##D28382|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK297482|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK299923|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK312338|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC103758|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK292619|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC007052|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC008423|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AL833432|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC092433|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK225032|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK302213|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_001077442|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_001077443|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_004500|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_031314|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AJ417067|RPGRIP1|57096|retinitis pigmentosa GTPase regulator interacting protein 1##NM_020366|RPGRIP1|57096|retinitis pigmentosa GTPase regulator interacting protein 1	0.996538	CTCF.p2:17:0.997
chrUn_gl000227	74532	74707	reg1005643.p1	7.520	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.460797	CTCF.p2:-53:0.999	CTCF.p2:67:0.279
chr4	164600479	164600602	reg1020954.p1	7.519	+	AB463878 AK000675 AK301408 NM_017923	-65825	-	TSC_hg19_v1_chr4_+_164415868 BC011842	-184667	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-184698	+	NM_012403	518322	-	AK289711 NM_001166373	703866	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	1277562	+	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39	0.903881	CTCF.p2:5:0.904
chr5	109926039	109926168	reg1021361.p1	7.519	+	AK314090 TSC_hg19_v1_chr5_+_109025749 BC142656 BC142696	-900344	+	D63998 TSC_hg19_v1_chr5_+_109025627	-900462	+	TSC_hg19_v1_chr5_+_109025138 NM_002372	-900958	+	AK296542 BC042563 BX648527 NM_001039763	136304	-	TSC_hg19_v1_chr5_+_110074720 AK091427	148620	+	TSC_hg19_v1_chr5_+_110074741 AK300123 BC017169 NM_138773 M74089 AK290217 AB529063	148677	+	AK314090|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##BC142656|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##BC142696|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##D63998|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##AK296542|TMEM232|642987|transmembrane protein 232##BC042563|TMEM232|642987|transmembrane protein 232##BX648527|TMEM232|642987|transmembrane protein 232##NM_001039763|TMEM232|642987|transmembrane protein 232##AK091427|SLC25A46|91137|solute carrier family 25, member 46##AK300123|SLC25A46|91137|solute carrier family 25, member 46##BC017169|SLC25A46|91137|solute carrier family 25, member 46##NM_138773|SLC25A46|91137|solute carrier family 25, member 46##M74089|SLC25A46|91137|solute carrier family 25, member 46##AK290217|SLC25A46|91137|solute carrier family 25, member 46	0.014227	
chr5	142382778	142382858	reg1015324.p1	7.519	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-232510	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-232846	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-305247	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	400005	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	400288	-	BC015610 TSC_hg19_v1_chr5_-_142783214	400393	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr5	45038632	45038766	reg1018678.p1	7.519	+	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	-229672	+	AF508782 AB002097 AF411527 BC069561 CR541665 CR541688 GQ351295 HQ258011 NM_004465 U67918 BC105023 BC105021 BC143772	-649934	-	Z50101 AB385177 AM392664 AM393615 TSC_hg19_v1_chr5_+_43609371	-1429383	+	AF064876 TSC_hg19_v1_chr5_-_45695947	657192	-	AF488549 NM_021072	657520	-	AK300860 TSC_hg19_v1_chr5_-_49737200 BC059398	4698500	-	AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AF508782|FGF10|2255|fibroblast growth factor 10##AB002097|FGF10|2255|fibroblast growth factor 10##AF411527|FGF10|2255|fibroblast growth factor 10##BC069561|FGF10|2255|fibroblast growth factor 10##CR541665|FGF10|2255|fibroblast growth factor 10##CR541688|FGF10|2255|fibroblast growth factor 10##GQ351295|FGF10|2255|fibroblast growth factor 10##HQ258011|FGF10|2255|fibroblast growth factor 10##NM_004465|FGF10|2255|fibroblast growth factor 10##U67918|FGF10|2255|fibroblast growth factor 10##BC105023|FGF10|2255|fibroblast growth factor 10##BC105021|FGF10|2255|fibroblast growth factor 10##Z50101|NNT|23530|nicotinamide nucleotide transhydrogenase##AM392664|NNT|23530|nicotinamide nucleotide transhydrogenase##AM393615|NNT|23530|nicotinamide nucleotide transhydrogenase##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AK300860|EMB|133418|embigin##BC059398|EMB|133418|embigin	0.997168	CTCF.p2:-17:0.997
chr7	112799945	112800080	reg1020927.p1	7.519	+	TSC_hg19_v1_chr7_-_112758613 BC107860	-41383	-	TSC_hg19_v1_chr7_-_112758606 BC065765 BX537645	-41406	-	NM_001146265 NM_018970 TSC_hg19_v1_chr7_-_112727844	-72172	-	X78578 AF024579 HQ258594 BC070313 BC056666 NM_002711 BC126451 BC126453	759071	-	TSC_hg19_v1_chr7_+_113726381 AK131266	926409	+	TSC_hg19_v1_chr7_+_113726514 AF454830	926491	+	BC107860|LOC401397|401397|uncharacterized LOC401397##BC065765|LOC401397|401397|uncharacterized LOC401397##BX537645|LOC401397|401397|uncharacterized LOC401397##NM_001146265|GPR85|54329|G protein-coupled receptor 85##NM_018970|GPR85|54329|G protein-coupled receptor 85##X78578|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AF024579|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##HQ258594|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC070313|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC056666|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##NM_002711|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126451|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126453|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AK131266|FOXP2|93986|forkhead box P2##AF454830|FOXP2|93986|forkhead box P2	0.708607	CTCF.p2:-18:0.709
chr7	121392864	121392998	reg1020950.p1	7.519	+	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	-356517	-	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	-356594	-	AF169963 NM_057168	-423842	+	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	120230	+	TSC_hg19_v1_chr7_+_121513214 U88967	120290	+	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	391358	-	AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase	0.34594	CTCF.p2:8:0.223
chr8	144516998	144517098	reg1019327.p1	7.519	+	NM_201589	-4447	-	TSC_hg19_v1_chr8_+_144451016 NM_052924 BC012135 BC025767 AB528055 AY082588 CU693058 AB067516	-65958	+	AF349017 NM_052963 TSC_hg19_v1_chr8_-_144417051	-99993	-	D63484 TSC_hg19_v1_chr8_-_144623602 BC038670	106543	-	TSC_hg19_v1_chr8_-_144623640 NM_015117	106584	-	AK291817 NM_001166237	118508	+	NM_201589|MAFA|389692|v-maf musculoaponeurotic fibrosarcoma oncogene homolog A (avian)##NM_052924|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC012135|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC025767|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AY082588|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AB067516|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AF349017|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_052963|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##D63484|ZC3H3|23144|zinc finger CCCH-type containing 3##BC038670|ZC3H3|23144|zinc finger CCCH-type containing 3##NM_015117|ZC3H3|23144|zinc finger CCCH-type containing 3##AK291817|GSDMD|79792|gasdermin D##NM_001166237|GSDMD|79792|gasdermin D	1.163105	CTCF.p2:-10:0.967
chr13	111297292	111297418	reg1017343.p1	7.518	+	TSC_hg19_v1_chr13_-_111268694 AK095260	-28657	-	TSC_hg19_v1_chr13_+_111267898 AK093771 AK298917 AX748297 AK302117 AK057767 AK296758 NM_001242881 NM_018210 AK296227 AK024260 BC041028 AK001631 AK225129	-29313	+	TSC_hg19_v1_chr13_+_111267870 NM_001242882 NM_001242883	-29525	+	TSC_hg19_v1_chr13_-_111358444 AB062436	61083	-	TSC_hg19_v1_chr13_-_111358447 BC007220	61093	-	TSC_hg19_v1_chr13_-_111358460 AK022180 NM_024537	61112	-	AK093771|CARKD|55739|carbohydrate kinase domain containing##AK298917|CARKD|55739|carbohydrate kinase domain containing##AK302117|CARKD|55739|carbohydrate kinase domain containing##AK057767|CARKD|55739|carbohydrate kinase domain containing##AK296758|CARKD|55739|carbohydrate kinase domain containing##NM_001242881|CARKD|55739|carbohydrate kinase domain containing##NM_018210|CARKD|55739|carbohydrate kinase domain containing##AK296227|CARKD|55739|carbohydrate kinase domain containing##AK024260|CARKD|55739|carbohydrate kinase domain containing##BC041028|CARKD|55739|carbohydrate kinase domain containing##AK001631|CARKD|55739|carbohydrate kinase domain containing##AK225129|CARKD|55739|carbohydrate kinase domain containing##NM_001242882|CARKD|55739|carbohydrate kinase domain containing##NM_001242883|CARKD|55739|carbohydrate kinase domain containing##AB062436|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##BC007220|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##AK022180|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##NM_024537|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)	0.047653	
chr17	34094077	34094190	reg1018841.p1	7.517	+	NM_145272 BC021727 AB528807 AY557347	-6196	+	AF508784 AF508785 NM_139285	-14237	-	AK122652 NM_033315 TSC_hg19_v1_chr17_+_34058691 BC041133	-35416	+	AF219624 BC011774 AY358987 TSC_hg19_v1_chr17_-_34122596 BC002631 AF330002 NM_001032278 NM_024302 AK122604	28495	-	TSC_hg19_v1_chr17_+_34136487 BC048985 AK304520 AK307637 AK314194 BC030591 NM_003487 NM_139215 U51334 AK313223 BC046099 X98893	42376	+	BC039129 TSC_hg19_v1_chr17_+_34171892	77654	+	NM_145272|C17orf50|146853|chromosome 17 open reading frame 50##BC021727|C17orf50|146853|chromosome 17 open reading frame 50##AY557347|C17orf50|146853|chromosome 17 open reading frame 50##AF508784|GAS2L2|246176|growth arrest-specific 2 like 2##AF508785|GAS2L2|246176|growth arrest-specific 2 like 2##NM_139285|GAS2L2|246176|growth arrest-specific 2 like 2##AK122652|RASL10B|91608|RAS-like, family 10, member B##NM_033315|RASL10B|91608|RAS-like, family 10, member B##BC041133|RASL10B|91608|RAS-like, family 10, member B##AF219624|MMP28|79148|matrix metallopeptidase 28##BC011774|MMP28|79148|matrix metallopeptidase 28##AY358987|MMP28|79148|matrix metallopeptidase 28##BC002631|MMP28|79148|matrix metallopeptidase 28##AF330002|MMP28|79148|matrix metallopeptidase 28##NM_001032278|MMP28|79148|matrix metallopeptidase 28##NM_024302|MMP28|79148|matrix metallopeptidase 28##AK122604|MMP28|79148|matrix metallopeptidase 28##BC048985|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK304520|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK307637|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK314194|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##BC030591|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##NM_003487|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##NM_139215|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##U51334|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##AK313223|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##BC046099|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##X98893|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa##BC039129|TAF15|8148|TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa	0.944823	CTCF.p2:-9:0.889
chr19	35633959	35634031	reg1019925.p1	7.517	+	BC029943 TSC_hg19_v1_chr19_-_35633495	-570	-	NM_005031	-3604	+	AK289811 TSC_hg19_v1_chr19_+_35629727 NM_021902	-4266	+	NM_022006 TSC_hg19_v1_chr19_+_35634167 AK296405 BC018619 AK057825 DQ892489 DQ895700 AB528536	199	+	TSC_hg19_v1_chr19_+_35645637 NM_014164 AK304012	11631	+	TSC_hg19_v1_chr19_+_35645641 AB072911 BC013834 NM_144779 AY358991 BC018798 AF161462 NM_001164605	11747	+	BC029943|LGI4|163175|leucine-rich repeat LGI family, member 4##NM_005031|FXYD1|5348|FXYD domain containing ion transport regulator 1##AK289811|FXYD1|5348|FXYD domain containing ion transport regulator 1##NM_021902|FXYD1|5348|FXYD domain containing ion transport regulator 1##NM_022006|FXYD7|53822|FXYD domain containing ion transport regulator 7##BC018619|FXYD7|53822|FXYD domain containing ion transport regulator 7##AK057825|FXYD7|53822|FXYD domain containing ion transport regulator 7##DQ892489|FXYD7|53822|FXYD domain containing ion transport regulator 7##DQ895700|FXYD7|53822|FXYD domain containing ion transport regulator 7##NM_014164|FXYD5|53827|FXYD domain containing ion transport regulator 5##AK304012|FXYD5|53827|FXYD domain containing ion transport regulator 5##AB072911|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC013834|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_144779|FXYD5|53827|FXYD domain containing ion transport regulator 5##AY358991|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC018798|FXYD5|53827|FXYD domain containing ion transport regulator 5##AF161462|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_001164605|FXYD5|53827|FXYD domain containing ion transport regulator 5	0.98995	CTCF.p2:18:0.990
chr6	41870017	41870131	reg1018109.p1	7.516	+	TSC_hg19_v1_chr6_-_41863114 BC014176 NM_018561	-6973	-	BC107435 AF216754 TSC_hg19_v1_chr6_+_41755425 BC018624 BC067252 BC022274 AB435319 L34839	-114641	+	TSC_hg19_v1_chr6_+_41755397 BC015975	-114685	+	AK097385 EU446931 AB463862 BC040950 AK023092 AF097725 BC032552 TSC_hg19_v1_chr6_-_41888856 AK293412	18694	-	TSC_hg19_v1_chr6_-_41888858 BC019866 AK300573 AK307070 BC012618 NM_004275	18800	-	BC050645 NM_004053 TSC_hg19_v1_chr6_+_41888966 AK095253	18900	+	BC014176|USP49|25862|ubiquitin specific peptidase 49##NM_018561|USP49|25862|ubiquitin specific peptidase 49##BC107435|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AF216754|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC018624|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC067252|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC022274|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AB435319|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##L34839|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC015975|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AK097385|MED20|9477|mediator complex subunit 20##EU446931|MED20|9477|mediator complex subunit 20##BC040950|MED20|9477|mediator complex subunit 20##AK023092|MED20|9477|mediator complex subunit 20##AF097725|MED20|9477|mediator complex subunit 20##BC032552|MED20|9477|mediator complex subunit 20##AK293412|MED20|9477|mediator complex subunit 20##BC019866|MED20|9477|mediator complex subunit 20##AK300573|MED20|9477|mediator complex subunit 20##AK307070|MED20|9477|mediator complex subunit 20##BC012618|MED20|9477|mediator complex subunit 20##NM_004275|MED20|9477|mediator complex subunit 20##BC050645|BYSL|705|bystin-like##NM_004053|BYSL|705|bystin-like	0.905328	CTCF.p2:-3:0.905
chr3	139935217	139935327	reg1018912.p1	7.515	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-281020	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-281254	+	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	-538444	-	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	461687	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	725495	+	TSC_hg19_v1_chr3_+_140770412 BC051354	835206	+	AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.906579	CTCF.p2:7:0.907
chr3	38046003	38046119	reg1018556.p1	7.515	+	TSC_hg19_v1_chr3_+_38035642 AK309304	-10399	+	NM_015873	-10984	+	TSC_hg19_v1_chr3_+_38032276 BC004300	-13785	+	TSC_hg19_v1_chr3_-_38066000 AK090774 AX746610	19969	-	NM_001130964	20216	-	AB385114 BC056157 AB209862 U09117 BC050382 AK098690 AK127813 AK292324 NM_006225 TSC_hg19_v1_chr3_-_38071155	25031	-	AK309304|VILL|50853|villin-like##NM_015873|VILL|50853|villin-like##BC004300|VILL|50853|villin-like##AK090774|PLCD1|5333|phospholipase C, delta 1##NM_001130964|PLCD1|5333|phospholipase C, delta 1##AB209862|PLCD1|5333|phospholipase C, delta 1##U09117|PLCD1|5333|phospholipase C, delta 1##BC050382|PLCD1|5333|phospholipase C, delta 1##AK098690|PLCD1|5333|phospholipase C, delta 1##AK127813|PLCD1|5333|phospholipase C, delta 1##AK292324|PLCD1|5333|phospholipase C, delta 1##NM_006225|PLCD1|5333|phospholipase C, delta 1	0.979788	CTCF.p2:9:0.980
chr5	142096651	142096771	reg1010369.p1	7.515	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-19140	-	M74028 NM_033136 AK312301	-30686	-	M60516 NM_000800	-31092	-	TSC_hg19_v1_chr5_+_142149971 BC068555	53261	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	53597	+	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	686112	-	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##M74028|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033136|FGF1|2246|fibroblast growth factor 1 (acidic)##AK312301|FGF1|2246|fibroblast growth factor 1 (acidic)##M60516|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.879271	CTCF.p2:-12:0.879
chr3	105405296	105405425	reg1016143.p1	7.514	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-319538	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	-319780	+	AY090780 NM_175056 BC143817	-3251493	+	CR749655 TSC_hg19_v1_chr3_-_105421064	15694	-	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	182447	-	TSC_hg19_v1_chr3_-_106959482 BC036229	1554119	-	AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.0	
chr5	44332615	44332722	reg1010067.p2	7.514	+	Z50101 AB385177 AM392664 AM393615 TSC_hg19_v1_chr5_+_43609371	-723352	+	TSC_hg19_v1_chr5_+_43603313 BC110543 BC110544	-729314	+	TSC_hg19_v1_chr5_+_43603303 AK299622 U40490	-729369	+	AF508782 AB002097 AF411527 BC069561 CR541665 CR541688 GQ351295 HQ258011 NM_004465 U67918 BC105023 BC105021 BC143772	56097	-	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	476359	+	AF064876 TSC_hg19_v1_chr5_-_45695947	1363223	-	Z50101|NNT|23530|nicotinamide nucleotide transhydrogenase##AM392664|NNT|23530|nicotinamide nucleotide transhydrogenase##AM393615|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110543|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110544|NNT|23530|nicotinamide nucleotide transhydrogenase##AK299622|NNT|23530|nicotinamide nucleotide transhydrogenase##U40490|NNT|23530|nicotinamide nucleotide transhydrogenase##AF508782|FGF10|2255|fibroblast growth factor 10##AB002097|FGF10|2255|fibroblast growth factor 10##AF411527|FGF10|2255|fibroblast growth factor 10##BC069561|FGF10|2255|fibroblast growth factor 10##CR541665|FGF10|2255|fibroblast growth factor 10##CR541688|FGF10|2255|fibroblast growth factor 10##GQ351295|FGF10|2255|fibroblast growth factor 10##HQ258011|FGF10|2255|fibroblast growth factor 10##NM_004465|FGF10|2255|fibroblast growth factor 10##U67918|FGF10|2255|fibroblast growth factor 10##BC105023|FGF10|2255|fibroblast growth factor 10##BC105021|FGF10|2255|fibroblast growth factor 10##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1	0.99951	CTCF.p2:1:1.000
chr6	18997686	18997792	reg1018096.p2	7.513	+	AK096832 NM_182757 AB076367 BC063311 AL832329	-610072	+	X64229 TSC_hg19_v1_chr6_-_18264759 BC012442 AK312616 AK298089 AK294079 BC035259 AK297749 NM_001134709 NM_003472	-733018	-	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	-842084	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	839896	+	TSC_hg19_v1_chr6_+_19838612 AF085889	840944	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	1214933	-	AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##X64229|DEK|7913|DEK oncogene##BC012442|DEK|7913|DEK oncogene##AK312616|DEK|7913|DEK oncogene##AK298089|DEK|7913|DEK oncogene##AK294079|DEK|7913|DEK oncogene##BC035259|DEK|7913|DEK oncogene##AK297749|DEK|7913|DEK oncogene##NM_001134709|DEK|7913|DEK oncogene##NM_003472|DEK|7913|DEK oncogene##BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1	0.963805	CTCF.p2:8:0.964
chr15	69815864	69815981	reg1018351.p1	7.512	+	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-70701	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-108560	-	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	-109176	+	BC015421 TSC_hg19_v1_chr15_-_70341948	525987	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	574305	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	574321	-	NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.996398	CTCF.p2:-3:0.996
chr7	99547375	99547515	reg1020093.p1	7.512	+	AB528858 AF503615 AY297109 NM_181538	-20203	-	TSC_hg19_v1_chr7_-_99517154 AF220023 AF220024 AK092892 AX747794 NM_033017 NM_033091	-30250	-	TSC_hg19_v1_chr7_-_99517144 AK293565	-30307	-	D90427 M76707 BC014470 AB463407 CU689768 X59766 BC005306 TSC_hg19_v1_chr7_-_99573655 BC005908 BC033830 NM_001185	26240	-	TSC_hg19_v1_chr7_+_99613225 AL833578 NM_003439 AF454940 AK054676 AY260738 BC022378 BX640646 AK091471 AX747005 AK074116	65780	+	BC112224 BC113697 CU692588 EU446909 HQ258578 TSC_hg19_v1_chr7_+_99621246	73720	+	AF503615|GJC3|349149|gap junction protein, gamma 3, 30.2kDa##AY297109|GJC3|349149|gap junction protein, gamma 3, 30.2kDa##NM_181538|GJC3|349149|gap junction protein, gamma 3, 30.2kDa##AF220023|TRIM4|89122|tripartite motif containing 4##AF220024|TRIM4|89122|tripartite motif containing 4##AK092892|TRIM4|89122|tripartite motif containing 4##NM_033017|TRIM4|89122|tripartite motif containing 4##NM_033091|TRIM4|89122|tripartite motif containing 4##AK293565|TRIM4|89122|tripartite motif containing 4##D90427|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##M76707|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC014470|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##X59766|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC005306|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC005908|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##BC033830|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##NM_001185|AZGP1|563|alpha-2-glycoprotein 1, zinc-binding##AL833578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##NM_003439|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AF454940|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK054676|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AY260738|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC022378|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BX640646|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK091471|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK074116|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC112224|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC113697|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##EU446909|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##HQ258578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1	0.099738	
chr9	6197445	6197580	reg1021226.p1	7.512	+	AF039023 AK300408 BC098406 TSC_hg19_v1_chr9_-_6015616 AK307840 BX537405 NM_001243202 NM_001243203 NM_012416	-181881	-	TSC_hg19_v1_chr9_-_6007953 NM_001017969	-189548	-	BC108654 TSC_hg19_v1_chr9_-_5968443	-229104	-	NM_001199640 NM_001199641 NM_033439 AK295908 AK313414 TSC_hg19_v1_chr9_+_6215806 AK303943 BC047085	18284	+	NM_001001874 NM_001001875 NM_033516 AK057479 AY032877 BC017589 BC042113 BC033792	130863	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	215632	+	AF039023|RANBP6|26953|RAN binding protein 6##AK300408|RANBP6|26953|RAN binding protein 6##BC098406|RANBP6|26953|RAN binding protein 6##BX537405|RANBP6|26953|RAN binding protein 6##NM_001243202|RANBP6|26953|RAN binding protein 6##NM_001243203|RANBP6|26953|RAN binding protein 6##NM_012416|RANBP6|26953|RAN binding protein 6##NM_001017969|KIAA2026|158358|KIAA2026##NM_001199640|IL33|90865|interleukin 33##NM_001199641|IL33|90865|interleukin 33##NM_033439|IL33|90865|interleukin 33##AK295908|IL33|90865|interleukin 33##AK313414|IL33|90865|interleukin 33##AK303943|IL33|90865|interleukin 33##BC047085|IL33|90865|interleukin 33##NM_001001874|TPD52L3|89882|tumor protein D52-like 3##NM_001001875|TPD52L3|89882|tumor protein D52-like 3##NM_033516|TPD52L3|89882|tumor protein D52-like 3##AK057479|TPD52L3|89882|tumor protein D52-like 3##AY032877|TPD52L3|89882|tumor protein D52-like 3##BC017589|TPD52L3|89882|tumor protein D52-like 3##BC042113|TPD52L3|89882|tumor protein D52-like 3##BC033792|TPD52L3|89882|tumor protein D52-like 3##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	0.92253	CTCF.p2:-4:0.802
chr11	104480069	104480182	reg1020123.p1	7.511	+	TSC_hg19_v1_chr11_-_104035100 BC030645	-445025	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	-445085	-	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	-445331	-	AF464191 AF464192 AF464193 AF464194 AF464195 AF486844 AF486845 AF486846 AF486847 NM_001191016	289271	-	NM_033306 U28977 U28978	347296	-	TSC_hg19_v1_chr11_-_104839279 U28979 BC008060 U28976 BC017839 U28014 AK225751 Z48810 U25804 AK296081 AK304222 NM_001225	359172	-	BC030645|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##AF464191|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464192|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464193|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464194|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464195|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486844|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486845|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486846|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486847|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_001191016|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_033306|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28977|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28978|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28979|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC008060|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28976|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC017839|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28014|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK225751|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##Z48810|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U25804|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK296081|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK304222|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##NM_001225|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	0.970956	CTCF.p2:0:0.971
chr1	203296999	203297142	reg1018305.p1	7.511	+	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	-22381	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-98255	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-141144	-	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	20314	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	23139	-	AK172740 TSC_hg19_v1_chr1_-_203320256	23191	-	NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.010981	
chr14	100523385	100523517	reg1019537.p1	7.511	+	AK295919 TSC_hg19_v1_chr14_+_100485800	-37692	+	TSC_hg19_v1_chr14_+_100438137 AK289720 BC023997	-85297	+	TSC_hg19_v1_chr14_+_100259749 AK126980 BX247979 NM_001008707 NM_004434 BC033043 U97018 BC032541 CU689414 DQ891556 DQ894743	-263747	+	TSC_hg19_v1_chr14_+_100531758 NM_016337 AK301379	8301	+	TSC_hg19_v1_chr14_+_100531768 AF087843 BC032358 AF052504	8344	+	AF131766 TSC_hg19_v1_chr14_+_100563847	40382	+	AK295919|EVL|51466|Enah/Vasp-like##AK289720|EVL|51466|Enah/Vasp-like##BC023997|EVL|51466|Enah/Vasp-like##AK126980|EML1|2009|echinoderm microtubule associated protein like 1##BX247979|EML1|2009|echinoderm microtubule associated protein like 1##NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1##NM_004434|EML1|2009|echinoderm microtubule associated protein like 1##BC033043|EML1|2009|echinoderm microtubule associated protein like 1##U97018|EML1|2009|echinoderm microtubule associated protein like 1##BC032541|EML1|2009|echinoderm microtubule associated protein like 1##DQ891556|EML1|2009|echinoderm microtubule associated protein like 1##DQ894743|EML1|2009|echinoderm microtubule associated protein like 1##NM_016337|EVL|51466|Enah/Vasp-like##AK301379|EVL|51466|Enah/Vasp-like##AF087843|EVL|51466|Enah/Vasp-like##BC032358|EVL|51466|Enah/Vasp-like##AF052504|EVL|51466|Enah/Vasp-like##AF131766|EVL|51466|Enah/Vasp-like	0.027316	
chr16	23739292	23739439	reg1018365.p1	7.511	+	AK131280 NM_033266	-14545	-	GQ129249 GQ129250 TSC_hg19_v1_chr16_-_23724544 AK309313 AK310834 EF560720 EF560739 AB047079	-14828	-	TSC_hg19_v1_chr16_+_23690236 BC014846 AB084459 AB528397 DQ891045 DQ894224	-49115	+	AF146019 NM_022097 AK313062	26654	+	TSC_hg19_v1_chr16_+_23847303 NM_002738 NM_212535	107929	+	TSC_hg19_v1_chr16_+_23847321 BC036472	107967	+	AK131280|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##NM_033266|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##GQ129249|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##GQ129250|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AK309313|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AK310834|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##EF560720|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##EF560739|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AB047079|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##BC014846|PLK1|5347|polo-like kinase 1##AB084459|PLK1|5347|polo-like kinase 1##DQ891045|PLK1|5347|polo-like kinase 1##DQ894224|PLK1|5347|polo-like kinase 1##AF146019|CHP2|63928|calcineurin B homologous protein 2##NM_022097|CHP2|63928|calcineurin B homologous protein 2##AK313062|CHP2|63928|calcineurin B homologous protein 2##NM_002738|PRKCB|5579|protein kinase C, beta##NM_212535|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta	0.0	
chr16	50840552	50840672	reg1009246.p2	7.511	+	TSC_hg19_v1_chr16_+_50776066 AF161542 NM_001042412 BC012342	-64554	+	NM_001042355 NM_015247 TSC_hg19_v1_chr16_+_50775996 AK292975 AK225202 AJ250014 AK310832 AK056226	-64628	+	AF178930 AY187243 NM_022162 AY187244 AY187246 AB527390	-109511	+	AK307835 NM_001127892	343895	-	BC113881 BC113906 BC131548 Y18265 TSC_hg19_v1_chr16_-_51185251 AK295103 NM_002968	344800	-	NM_001242473	1267234	-	AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)##BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042355|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_015247|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK292975|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK225202|CYLD|1540|cylindromatosis (turban tumor syndrome)##AJ250014|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK310832|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK056226|CYLD|1540|cylindromatosis (turban tumor syndrome)##AF178930|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187243|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_022162|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187244|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187246|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AK307835|SALL1|6299|sal-like 1 (Drosophila)##NM_001127892|SALL1|6299|sal-like 1 (Drosophila)##BC113881|SALL1|6299|sal-like 1 (Drosophila)##BC113906|SALL1|6299|sal-like 1 (Drosophila)##BC131548|SALL1|6299|sal-like 1 (Drosophila)##Y18265|SALL1|6299|sal-like 1 (Drosophila)##AK295103|SALL1|6299|sal-like 1 (Drosophila)##NM_002968|SALL1|6299|sal-like 1 (Drosophila)##NM_001242473|LOC388276|388276|hCG2045437	0.998298	CTCF.p2:13:0.998
chr3	171332444	171332574	reg1020554.p1	7.511	+	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-154438	-	NM_000340	-587742	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-587976	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	195746	-	NM_001164436 AK026825	228639	+	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	424906	+	AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B	0.800341	CTCF.p2:6:0.800
chr10	90976875	90977019	reg1015141.p1	7.510	+	CU687230 DQ892026 DQ895218 BC072430 AF059214 BC017843 NM_003956 AK314865	-9887	-	AK311424 TSC_hg19_v1_chr10_+_90751184 AK311164 AK311499	-225826	+	TSC_hg19_v1_chr10_-_90751090 AY692464 NM_001141945	-225897	-	U08464 Z31690 TSC_hg19_v1_chr10_-_91011533 AK222760 AK290241 AK297079 AK314665 M74775	34583	-	AK130882 TSC_hg19_v1_chr10_-_91011565	34620	-	TSC_hg19_v1_chr10_-_91011616 BC012287 X76488 NM_000235 NM_001127605	34675	-	DQ892026|CH25H|9023|cholesterol 25-hydroxylase##DQ895218|CH25H|9023|cholesterol 25-hydroxylase##BC072430|CH25H|9023|cholesterol 25-hydroxylase##AF059214|CH25H|9023|cholesterol 25-hydroxylase##BC017843|CH25H|9023|cholesterol 25-hydroxylase##NM_003956|CH25H|9023|cholesterol 25-hydroxylase##AK314865|CH25H|9023|cholesterol 25-hydroxylase##AK311424|FAS|355|Fas (TNF receptor superfamily, member 6)##AK311164|FAS|355|Fas (TNF receptor superfamily, member 6)##AK311499|FAS|355|Fas (TNF receptor superfamily, member 6)##AY692464|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001141945|ACTA2|59|actin, alpha 2, smooth muscle, aorta##U08464|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##Z31690|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK222760|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK290241|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK297079|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK314665|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##M74775|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK130882|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##BC012287|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##X76488|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_000235|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_001127605|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase	0.99571	CTCF.p2:-25:0.996
chr21	36423666	36423769	reg1019478.p2	7.510	+	AK310646 TSC_hg19_v1_chr21_-_36421641 D43969	-2082	-	TSC_hg19_v1_chr21_-_36421598 NM_001754	-2114	-	TSC_hg19_v1_chr21_-_36421585 AK310587 D89788 D89789 D89790	-2136	-	AK095215 BC002898 TSC_hg19_v1_chr21_-_37432613 AB004853 NM_001007259 AF391112 AK001660	1008903	-	BC036556 TSC_hg19_v1_chr21_-_37432809 AK300009 NM_017438	1009099	-	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	1018536	+	D43969|RUNX1|861|runt-related transcription factor 1##NM_001754|RUNX1|861|runt-related transcription factor 1##AK310587|RUNX1|861|runt-related transcription factor 1##D89788|RUNX1|861|runt-related transcription factor 1##D89789|RUNX1|861|runt-related transcription factor 1##D89790|RUNX1|861|runt-related transcription factor 1##AK095215|SETD4|54093|SET domain containing 4##BC002898|SETD4|54093|SET domain containing 4##AB004853|SETD4|54093|SET domain containing 4##NM_001007259|SETD4|54093|SET domain containing 4##AF391112|SETD4|54093|SET domain containing 4##AK001660|SETD4|54093|SET domain containing 4##BC036556|SETD4|54093|SET domain containing 4##AK300009|SETD4|54093|SET domain containing 4##NM_017438|SETD4|54093|SET domain containing 4##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1	0.827244	CTCF.p2:-4:0.827
chr2	89453980	89454104	reg1018602.p1	7.510	+	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-11453	-	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	-161629	-	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	-268952	+	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	59191	-	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	165811	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	623712	+	BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC070334|IGKC|3514|immunoglobulin kappa constant	0.494601	CTCF.p2:9:0.495
chr3	129548530	129548628	reg1016708.p1	7.510	+	TSC_hg19_v1_chr3_-_129325518 NM_015103 AB014520 AY116661 BC150280	-223140	-	AY158091 NM_153833	-286523	+	NM_000539 BX537381 BC112104 BC112106 AB464154 AM392780	-301052	+	AK291448 BC039859 NM_001017395	50731	-	TSC_hg19_v1_chr3_-_129612445 NM_001128224	63839	-	TSC_hg19_v1_chr3_+_129612705 AK127796	64139	+	NM_015103|PLXND1|23129|plexin D1##AB014520|PLXND1|23129|plexin D1##AY116661|PLXND1|23129|plexin D1##BC150280|PLXND1|23129|plexin D1##AY158091|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_153833|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_000539|RHO|6010|rhodopsin##BX537381|RHO|6010|rhodopsin##BC112104|RHO|6010|rhodopsin##BC112106|RHO|6010|rhodopsin##AM392780|RHO|6010|rhodopsin##AK291448|TMCC1|23023|transmembrane and coiled-coil domain family 1##BC039859|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001017395|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001128224|TMCC1|23023|transmembrane and coiled-coil domain family 1##AK127796|LOC100507032|100507032|uncharacterized LOC100507032	0.986095	CTCF.p2:16:0.986
chr3	2963668	2963826	reg1018364.p2	7.510	+	NM_001206956 NM_175613 AK057278 AK314396 BC026119	-29838	+	AK095729 TSC_hg19_v1_chr3_+_2553286	-410467	+	NM_001206955	-683235	+	AK304256 NM_000564 NM_001243099 NM_175724 NM_175725 NM_175726 NM_175727 NM_175728	188310	-	NM_182916 TSC_hg19_v1_chr3_+_3168634 AK290411 BC005184 AL834397 BC012537 AB063105 AF151805 AK124137	204904	+	TSC_hg19_v1_chr3_-_3221376 AF117230 CU675978 CU688352 AK058191 BC059171 CR627060 AK027507 AK312577 BC017419 BC067811	257625	-	NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4##AK095729|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4##AK304256|IL5RA|3568|interleukin 5 receptor, alpha##NM_000564|IL5RA|3568|interleukin 5 receptor, alpha##NM_001243099|IL5RA|3568|interleukin 5 receptor, alpha##NM_175724|IL5RA|3568|interleukin 5 receptor, alpha##NM_175725|IL5RA|3568|interleukin 5 receptor, alpha##NM_175726|IL5RA|3568|interleukin 5 receptor, alpha##NM_175727|IL5RA|3568|interleukin 5 receptor, alpha##NM_175728|IL5RA|3568|interleukin 5 receptor, alpha##NM_182916|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AK290411|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC005184|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AL834397|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC012537|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AB063105|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AF151805|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AF117230|CRBN|51185|cereblon##AK058191|CRBN|51185|cereblon##BC059171|CRBN|51185|cereblon##CR627060|CRBN|51185|cereblon##AK027507|CRBN|51185|cereblon##AK312577|CRBN|51185|cereblon##BC017419|CRBN|51185|cereblon##BC067811|CRBN|51185|cereblon	0.134424	
chr4	116155704	116155814	reg1015780.p1	7.510	+	BC113075 BC012326 AK289670 AB036429 NM_022569	-120778	-	NM_003360 U30930	-612237	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-636176	+	AK074617 BC030831 NM_152402	1850974	-	TSC_hg19_v1_chr4_+_118954764 AY358852	2799012	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	2799816	+	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.352912	CTCF.p2:-10:0.353
chr12	27588130	27588260	reg1019530.p1	7.509	+	TSC_hg19_v1_chr12_+_27485806 AF256215 NM_001248002 NM_001248003 NM_001248004 NM_001248005 NM_020183 AK296706 AF246960 AF246961 AF246962 AF246963 BC125062 BC125061	-102316	+	TSC_hg19_v1_chr12_+_27397225 AK304755	-190970	+	TSC_hg19_v1_chr12_+_27397187 AK291055	-191008	+	BC043511 TSC_hg19_v1_chr12_-_27599649	11409	-	NM_001145010	31547	+	NM_001198915 NM_001198916 NM_003622 NM_177444 TSC_hg19_v1_chr12_+_27677138 BC022873 BC001560 AK294267 AB033056 BC050281 AB049149 AK314350 AF034802 BC046159	88940	+	AF256215|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248002|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248003|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248004|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248005|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_020183|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AK296706|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246960|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246961|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246962|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246963|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##BC125062|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##BC125061|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AK304755|STK38L|23012|serine/threonine kinase 38 like##AK291055|STK38L|23012|serine/threonine kinase 38 like##BC043511|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001145010|C12orf70|341346|chromosome 12 open reading frame 70##NM_001198915|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_001198916|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_003622|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_177444|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC022873|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC001560|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK294267|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB033056|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC050281|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB049149|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK314350|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AF034802|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC046159|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	0.998987	CTCF.p2:7:0.999
chr3	179040626	179040749	reg1019161.p1	7.509	+	AK304837 NM_001163677 NM_171828	-55874	-	BC082272 NM_171829	-63009	-	NM_171830	-71043	-	TSC_hg19_v1_chr3_+_179040818 BC026181	179	+	AB097862 AF003924 NM_016331	863	+	BC040557 NM_033540 TSC_hg19_v1_chr3_+_179065522 BC020661 AB043589 AK000700 AK314306	24827	+	AK304837|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_001163677|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_171828|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##BC082272|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_171829|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_171830|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##BC026181|ZNF639|51193|zinc finger protein 639##AB097862|ZNF639|51193|zinc finger protein 639##AF003924|ZNF639|51193|zinc finger protein 639##NM_016331|ZNF639|51193|zinc finger protein 639##BC040557|MFN1|55669|mitofusin 1##NM_033540|MFN1|55669|mitofusin 1##BC020661|MFN1|55669|mitofusin 1##AB043589|MFN1|55669|mitofusin 1##AK000700|MFN1|55669|mitofusin 1##AK314306|MFN1|55669|mitofusin 1	0.891331	CTCF.p2:-5:0.891
chr1	182050258	182050349	reg1018142.p1	7.508	+	BC137223 BC137224 AK128654 NM_001009992	-19506	-	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-597603	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-992438	+	TSC_hg19_v1_chr1_-_182354649 AK301600	304379	-	TSC_hg19_v1_chr1_-_182357758 BC127883	307460	-	AY486122 S70290 AB528372 DQ893278 DQ896609 EU832658 EU832735 TSC_hg19_v1_chr1_-_182357935	307600	-	BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase##AY486122|GLUL|2752|glutamate-ammonia ligase##S70290|GLUL|2752|glutamate-ammonia ligase##DQ893278|GLUL|2752|glutamate-ammonia ligase##DQ896609|GLUL|2752|glutamate-ammonia ligase##EU832658|GLUL|2752|glutamate-ammonia ligase##EU832735|GLUL|2752|glutamate-ammonia ligase	0.69814	CTCF.p2:0:0.698
chr6	160030138	160030244	reg1017768.p2	7.508	+	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	-439761	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-564090	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-608970	-	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	84059	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	84171	-	TSC_hg19_v1_chr6_+_160148149 AK290854 AF374416 NM_004906 NM_152858 BC000383 BC004432 BC069192	117981	+	DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial##AK290854|WTAP|9589|Wilms tumor 1 associated protein##AF374416|WTAP|9589|Wilms tumor 1 associated protein##NM_004906|WTAP|9589|Wilms tumor 1 associated protein##NM_152858|WTAP|9589|Wilms tumor 1 associated protein##BC000383|WTAP|9589|Wilms tumor 1 associated protein##BC004432|WTAP|9589|Wilms tumor 1 associated protein##BC069192|WTAP|9589|Wilms tumor 1 associated protein	0.0	
chr6	99567443	99567554	reg1017713.p2	7.508	+	TSC_hg19_v1_chr6_-_99395817 AK313076 BC055010 BC039819 NM_012160	-171671	-	TSC_hg19_v1_chr6_-_99395800 BC091484 BC032641	-171709	-	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	-284826	+	BC004869 BC011583 NM_032511	230032	-	AF193016 BC015634 BC001534 BC063463 CU687730 AB590714 AF351615 AK056955 AL136726 NM_017421	274555	-	AF314185 TSC_hg19_v1_chr6_-_99849313 AL080186	281793	-	AK313076|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC055010|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC039819|FBXL4|26235|F-box and leucine-rich repeat protein 4##NM_012160|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC091484|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC032641|FBXL4|26235|F-box and leucine-rich repeat protein 4##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2##BC004869|C6orf168|84553|chromosome 6 open reading frame 168##BC011583|C6orf168|84553|chromosome 6 open reading frame 168##NM_032511|C6orf168|84553|chromosome 6 open reading frame 168##AF193016|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC015634|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC001534|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC063463|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AF351615|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AK056955|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AL136726|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##NM_017421|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AF314185|PNISR|25957|PNN-interacting serine/arginine-rich protein##AL080186|PNISR|25957|PNN-interacting serine/arginine-rich protein	0.99493	CTCF.p2:3:0.995
chr10	5484161	5484309	reg1019836.p1	7.507	+	TSC_hg19_v1_chr10_+_5454547 NM_001047160 AK299335 BC053553 S82401 AB587387 CU690984	-29650	+	TSC_hg19_v1_chr10_-_5446792 BC098247 BC099716 BC105634 AK296616 AK025318 NM_001171864 NM_024803	-37447	-	NM_053049 BC100867 BC100868 BC100869 BC100870	-77221	+	TSC_hg19_v1_chr10_+_5488571 NM_005863 AK294244 AK304028 AK315566 AK024919 AJ010046 BC010285 CU679671	4388	+	AB590761 AF172852 BC039172 AK222744 NM_017422	57231	-	AK313934 M58026 NM_005185 BC031889 AB590316	82750	+	NM_001047160|NET1|10276|neuroepithelial cell transforming 1##AK299335|NET1|10276|neuroepithelial cell transforming 1##BC053553|NET1|10276|neuroepithelial cell transforming 1##S82401|NET1|10276|neuroepithelial cell transforming 1##BC098247|TUBAL3|79861|tubulin, alpha-like 3##BC099716|TUBAL3|79861|tubulin, alpha-like 3##BC105634|TUBAL3|79861|tubulin, alpha-like 3##AK296616|TUBAL3|79861|tubulin, alpha-like 3##AK025318|TUBAL3|79861|tubulin, alpha-like 3##NM_001171864|TUBAL3|79861|tubulin, alpha-like 3##NM_024803|TUBAL3|79861|tubulin, alpha-like 3##NM_053049|UCN3|114131|urocortin 3 (stresscopin)##BC100867|UCN3|114131|urocortin 3 (stresscopin)##BC100868|UCN3|114131|urocortin 3 (stresscopin)##BC100869|UCN3|114131|urocortin 3 (stresscopin)##BC100870|UCN3|114131|urocortin 3 (stresscopin)##NM_005863|NET1|10276|neuroepithelial cell transforming 1##AK294244|NET1|10276|neuroepithelial cell transforming 1##AK304028|NET1|10276|neuroepithelial cell transforming 1##AK315566|NET1|10276|neuroepithelial cell transforming 1##AK024919|NET1|10276|neuroepithelial cell transforming 1##AJ010046|NET1|10276|neuroepithelial cell transforming 1##BC010285|NET1|10276|neuroepithelial cell transforming 1##AF172852|CALML5|51806|calmodulin-like 5##BC039172|CALML5|51806|calmodulin-like 5##AK222744|CALML5|51806|calmodulin-like 5##NM_017422|CALML5|51806|calmodulin-like 5##AK313934|CALML3|810|calmodulin-like 3##M58026|CALML3|810|calmodulin-like 3##NM_005185|CALML3|810|calmodulin-like 3##BC031889|CALML3|810|calmodulin-like 3	0.101541	
chr13	46863259	46863400	reg1018691.p1	7.507	+	TSC_hg19_v1_chr13_-_46756327 BC053839 M34426 BC010271 AK223305 AK093568 NM_002298	-106937	-	TSC_hg19_v1_chr13_-_46756297 BC007673 AB208984 AK312393	-107021	-	TSC_hg19_v1_chr13_-_46756291 J02923	-107037	-	AK300183 BC032311 BC043488 TSC_hg19_v1_chr13_-_46961376 AK307854	98016	-	TSC_hg19_v1_chr13_-_46961379 AK025215 AK293034	98055	-	NM_025113	98305	-	BC053839|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##M34426|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##BC010271|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AK223305|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##NM_002298|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##BC007673|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AB208984|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AK312393|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AK300183|KIAA0226L|80183|KIAA0226-like##BC032311|KIAA0226L|80183|KIAA0226-like##BC043488|KIAA0226L|80183|KIAA0226-like##AK307854|KIAA0226L|80183|KIAA0226-like##AK025215|KIAA0226L|80183|KIAA0226-like##AK293034|KIAA0226L|80183|KIAA0226-like##NM_025113|KIAA0226L|80183|KIAA0226-like	0.137021	
chr1	6787660	6787798	reg1018569.p1	7.507	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-25798	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-25847	-	AL833841 BC008772 TSC_hg19_v1_chr1_-_6761875 CU675235 CU680804 BC006086 AK294539 AF306694 AK001599 BC014145 AY336749	-25872	-	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	57762	+	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	1043647	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	1056680	+	NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AL833841|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC008772|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC006086|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AK294539|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306694|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AK001599|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC014145|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AY336749|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)	0.172175	
chr7	19705153	19705307	reg1021289.p1	7.507	+	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	-520217	-	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	-547952	-	TSC_hg19_v1_chr7_+_18548965 AK304343	-1156261	+	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	43416	-	BX648384 NM_152774	107173	-	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	551750	-	BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##AK304343|HDAC9|9734|histone deacetylase 9##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1	0.032331	
chr12	66673053	66673155	reg1018684.p2	7.506	+	BC069388 AK298645 TSC_hg19_v1_chr12_+_66583064 AB590803 CU691242	-90051	+	TSC_hg19_v1_chr12_+_66583004 AF113136	-90094	+	TSC_hg19_v1_chr12_+_66582993 BC029493 NM_001142523 NM_007199 BC047399 AK314040 BC057800	-90146	+	TSC_hg19_v1_chr12_+_66696305 NM_033647 BC143409 BC143411 AK290894 AK024464 AB527324 AF319995	23225	+	BC115393 BC115394 TSC_hg19_v1_chr12_-_67072757 AK307576	399652	-	TSC_hg19_v1_chr12_-_67072881 AK095519 NM_001178074 NM_021150	399798	-	BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3##NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3##NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3##NM_033647|HELB|92797|helicase (DNA) B##BC143409|HELB|92797|helicase (DNA) B##BC143411|HELB|92797|helicase (DNA) B##AK290894|HELB|92797|helicase (DNA) B##AF319995|HELB|92797|helicase (DNA) B##BC115393|GRIP1|23426|glutamate receptor interacting protein 1##BC115394|GRIP1|23426|glutamate receptor interacting protein 1##AK307576|GRIP1|23426|glutamate receptor interacting protein 1##AK095519|GRIP1|23426|glutamate receptor interacting protein 1##NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1##NM_021150|GRIP1|23426|glutamate receptor interacting protein 1	0.959711	CTCF.p2:5:0.960
chr3	186649087	186649222	reg1018603.p1	7.506	+	X17247 TSC_hg19_v1_chr3_+_186648632	-577	+	TSC_hg19_v1_chr3_+_186648314 NM_173216 NM_173217	-845	+	BC096308 BC096309 BC096310 BC096311 TSC_hg19_v1_chr3_+_186560498 AK291525 AK312868 AX767959 D45371 BC054496	-88655	+	U67847 TSC_hg19_v1_chr3_+_186714361	65194	+	AK292879 BC040009 NM_003032 X62822 BC031476 L11720 X54363	90518	+	TSC_hg19_v1_chr3_-_186857285 L05096 AB063610 BC012328 NM_052969	208102	-	X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_173216|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_173217|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC096308|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096309|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096310|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096311|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AK291525|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AK312868|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AX767959|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##D45371|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC054496|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AK292879|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC040009|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_003032|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X62822|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC031476|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##L11720|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X54363|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##L05096|RPL39L|116832|ribosomal protein L39-like##AB063610|RPL39L|116832|ribosomal protein L39-like##BC012328|RPL39L|116832|ribosomal protein L39-like##NM_052969|RPL39L|116832|ribosomal protein L39-like	0.07826	
chr8	96640268	96640409	reg1020048.p1	7.506	+	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	-358873	-	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	-359287	+	TSC_hg19_v1_chr8_+_96146116 AK023249	-494202	+	BC127948 BC127947 AJ537424 NM_001001557	532643	-	CR542176 CR542196 TSC_hg19_v1_chr8_-_97247774 AK307085 NM_001199975 BC041005 AK295007 AK311756 M22348 X13585 M26700 BC005230 NM_006294	607471	-	BC012995 NM_015942 TSC_hg19_v1_chr8_-_97273837 AK309002	633479	-	BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6##CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_001199975|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC012995|MTERFD1|51001|MTERF domain containing 1##NM_015942|MTERFD1|51001|MTERF domain containing 1##AK309002|MTERFD1|51001|MTERF domain containing 1	0.982143	CTCF.p2:-15:0.982
chr17	54731425	54731541	reg1019431.p1	7.505	+	AK314080 NM_005450 TSC_hg19_v1_chr17_+_54671080	-60414	+	NM_153228 AK095654	-500647	+	TSC_hg19_v1_chr17_+_53828441 AF114430 NM_001102402 AK058120 BC005112	-902883	+	BC093905 BC093907 NM_001085430	161766	-	BC041467 TSC_hg19_v1_chr17_-_54911271	179790	-	TSC_hg19_v1_chr17_+_54911515 NM_003647 BC022297 AK310668 AK293039 U49379	180021	+	AK314080|NOG|9241|noggin##NM_005450|NOG|9241|noggin##NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AF114430|PCTP|58488|phosphatidylcholine transfer protein##NM_001102402|PCTP|58488|phosphatidylcholine transfer protein##AK058120|PCTP|58488|phosphatidylcholine transfer protein##BC005112|PCTP|58488|phosphatidylcholine transfer protein##BC093905|C17orf67|339210|chromosome 17 open reading frame 67##BC093907|C17orf67|339210|chromosome 17 open reading frame 67##NM_001085430|C17orf67|339210|chromosome 17 open reading frame 67##BC041467|C17orf67|339210|chromosome 17 open reading frame 67##NM_003647|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##BC022297|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##AK310668|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##AK293039|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##U49379|DGKE|8526|diacylglycerol kinase, epsilon 64kDa	0.538129	CTCF.p2:3:0.538
chr8	145465691	145465821	reg1022417.p1	7.505	+	BC003035 BC009915 NM_016458 AK098226 BC015471	-27853	+	AX721087 NM_001008271 NM_001080514	-144267	+	AK295740 NM_001099280 NM_001099281 NM_032450 AK093563 AX748203 BC057824 BC067855 BC092486	-262828	+	AX721087 NM_001008271 NM_001080514	24819	+	BC007274 TSC_hg19_v1_chr8_-_145515060 DQ896815 EU176248	49281	-	BC017674 TSC_hg19_v1_chr8_-_145515087 AK290677 BC013787 BC013980 AK315612	49323	-	BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##AK295740|HEATR7A|727957|HEAT repeat containing 7A##NM_001099280|HEATR7A|727957|HEAT repeat containing 7A##NM_001099281|HEATR7A|727957|HEAT repeat containing 7A##NM_032450|HEATR7A|727957|HEAT repeat containing 7A##AK093563|HEATR7A|727957|HEAT repeat containing 7A##BC057824|HEATR7A|727957|HEAT repeat containing 7A##BC067855|HEATR7A|727957|HEAT repeat containing 7A##BC092486|HEATR7A|727957|HEAT repeat containing 7A##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##BC007274|BOP1|23246|block of proliferation 1##DQ896815|BOP1|23246|block of proliferation 1##EU176248|BOP1|23246|block of proliferation 1##BC017674|BOP1|23246|block of proliferation 1##AK290677|BOP1|23246|block of proliferation 1##BC013787|BOP1|23246|block of proliferation 1##BC013980|BOP1|23246|block of proliferation 1##AK315612|BOP1|23246|block of proliferation 1	0.998753	CTCF.p2:-1:0.999
chr14	54795983	54796101	reg1021334.p1	7.504	+	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	-372509	-	NM_130851	-374773	-	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-1175992	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	67679	+	TSC_hg19_v1_chr14_-_54908095 BX248284 AY358635 AK074781 AK307074 AK311897 AF070654 AF104398 NM_005776 BC103741	112074	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	159643	-	BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##NM_130851|BMP4|652|bone morphogenetic protein 4##NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BX248284|CNIH|10175|cornichon homolog (Drosophila)##AY358635|CNIH|10175|cornichon homolog (Drosophila)##AK074781|CNIH|10175|cornichon homolog (Drosophila)##AK307074|CNIH|10175|cornichon homolog (Drosophila)##AK311897|CNIH|10175|cornichon homolog (Drosophila)##AF070654|CNIH|10175|cornichon homolog (Drosophila)##AF104398|CNIH|10175|cornichon homolog (Drosophila)##NM_005776|CNIH|10175|cornichon homolog (Drosophila)##BC103741|CNIH|10175|cornichon homolog (Drosophila)##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta	0.0	
chr18	67753876	67754036	reg1014478.p1	7.504	+	GU935335 GU935336 U56102 NM_006566	-129761	-	AK313199 TSC_hg19_v1_chr18_-_67615110	-138857	-	TSC_hg19_v1_chr18_+_67068214 NM_152721 AY599248 BC096744	-685726	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	118982	-	NM_004232 TSC_hg19_v1_chr18_+_67956194	202211	+	TSC_hg19_v1_chr18_+_67956280 BC020082	202305	+	GU935335|CD226|10666|CD226 molecule##GU935336|CD226|10666|CD226 molecule##U56102|CD226|10666|CD226 molecule##NM_006566|CD226|10666|CD226 molecule##AK313199|CD226|10666|CD226 molecule##NM_152721|DOK6|220164|docking protein 6##AY599248|DOK6|220164|docking protein 6##BC096744|DOK6|220164|docking protein 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC020082|SOCS6|9306|suppressor of cytokine signaling 6	0.999674	CTCF.p2:29:1.000
chr6	165853533	165853672	reg1017905.p1	7.504	+	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	-130510	-	AL050218 TSC_hg19_v1_chr6_+_163984651	-1868989	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	-2017370	+	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	222094	-	AY203946 TSC_hg19_v1_chr6_-_166076051	222450	-	TSC_hg19_v1_chr6_-_166401424 AK289375	547831	-	BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AL050218|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##AY203946|LOC100132188|100132188|LP7097##AK289375|LINC00473|90632|long intergenic non-protein coding RNA 473	0.993228	CTCF.p2:-5:0.993
chr10	120610128	120610242	reg1018085.p2	7.503	+	TSC_hg19_v1_chr10_-_120514701 AY743663 BC038294 NM_153810	-95468	-	TSC_hg19_v1_chr10_-_120514483 AJ544771 AK097728	-95674	-	CU691560 TSC_hg19_v1_chr10_-_120514298	-95898	-	AF458985 NM_199461 AF275269	179064	+	BC114429 BC114429 TSC_hg19_v1_chr10_-_120840295 U58046 U58046 BC054342 BC033769	230083	-	TSC_hg19_v1_chr10_-_120840299 U78311 U78311	230114	-	AY743663|C10orf46|143384|chromosome 10 open reading frame 46##BC038294|C10orf46|143384|chromosome 10 open reading frame 46##NM_153810|C10orf46|143384|chromosome 10 open reading frame 46##AJ544771|C10orf46|143384|chromosome 10 open reading frame 46##AK097728|C10orf46|143384|chromosome 10 open reading frame 46##AF458985|NANOS1|340719|nanos homolog 1 (Drosophila)##NM_199461|NANOS1|340719|nanos homolog 1 (Drosophila)##AF275269|NANOS1|340719|nanos homolog 1 (Drosophila)##BC114429|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##BC114429|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##U58046|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##U58046|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##BC054342|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##BC033769|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##U78311|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A##U78311|EIF3A|8661|eukaryotic translation initiation factor 3, subunit A	0.999133	CTCF.p2:-7:0.999
chr2	211264277	211264424	reg1019645.p1	7.503	+	AB527940 CR456869 TSC_hg19_v1_chr2_-_211179896 NM_079420 AK311942	-84511	-	X05451 M20643 AK311892 BC005318 NM_079422	-96024	-	BC064549 BC039063 AK313498 AK296161 NM_001608	-174170	-	TSC_hg19_v1_chr2_-_211341454 AK294674 BC028685 NM_001136574 Y11395 AK309295 AK312381 NM_006055 NM_001136575	77103	-	NM_001122633 AB208800	78068	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	157039	+	CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##X05451|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##M20643|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##AK311892|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##BC005318|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##NM_079422|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##BC064549|ACADL|33|acyl-CoA dehydrogenase, long chain##BC039063|ACADL|33|acyl-CoA dehydrogenase, long chain##AK313498|ACADL|33|acyl-CoA dehydrogenase, long chain##AK296161|ACADL|33|acyl-CoA dehydrogenase, long chain##NM_001608|ACADL|33|acyl-CoA dehydrogenase, long chain##AK294674|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##BC028685|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_001136574|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##Y11395|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##AK309295|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##AK312381|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_006055|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_001136575|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	0.991128	CTCF.p2:4:0.991
chr7	12536537	12536685	reg1021542.p1	7.503	+	NM_001135924	-92760	-	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	-93079	-	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	-285686	+	AB067492 NM_001112706 AK290363 AK075123 TSC_hg19_v1_chr7_+_12610346 BC021090 AB590413 DQ892033 DQ895224 AF276507	73696	+	AK027778 NM_033128	92536	+	TSC_hg19_v1_chr7_+_12726499 NM_001037164 NM_212460 BC039123 BC001111 BC003027	189875	+	NM_001135924|VWDE|221806|von Willebrand factor D and EGF domains##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains##NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AB067492|SCIN|85477|scinderin##NM_001112706|SCIN|85477|scinderin##AK290363|SCIN|85477|scinderin##AK075123|SCIN|85477|scinderin##BC021090|SCIN|85477|scinderin##DQ892033|SCIN|85477|scinderin##DQ895224|SCIN|85477|scinderin##AF276507|SCIN|85477|scinderin##AK027778|SCIN|85477|scinderin##NM_033128|SCIN|85477|scinderin##NM_001037164|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_212460|ARL4A|10124|ADP-ribosylation factor-like 4A##BC039123|ARL4A|10124|ADP-ribosylation factor-like 4A##BC001111|ARL4A|10124|ADP-ribosylation factor-like 4A##BC003027|ARL4A|10124|ADP-ribosylation factor-like 4A	0.999797	CTCF.p2:14:1.000
chr7	37871964	37872085	reg1017335.p2	7.503	+	AB529245 AY288420 BC120951 BC120952 NM_181791	-92029	+	BC043356 TSC_hg19_v1_chr7_+_37723380	-148642	+	NM_001206480	-383130	-	BC036816 NM_016616	16174	+	AF026692 BC047684 BC058911 AK313029 TSC_hg19_v1_chr7_-_37956420 AK303977 AK302357	84387	-	TSC_hg19_v1_chr7_-_37956526 BC032828 NM_003014	84496	-	AY288420|GPR141|353345|G protein-coupled receptor 141##BC120951|GPR141|353345|G protein-coupled receptor 141##BC120952|GPR141|353345|G protein-coupled receptor 141##NM_181791|GPR141|353345|G protein-coupled receptor 141##NM_001206480|ELMO1|9844|engulfment and cell motility 1##BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##AF026692|SFRP4|6424|secreted frizzled-related protein 4##BC047684|SFRP4|6424|secreted frizzled-related protein 4##BC058911|SFRP4|6424|secreted frizzled-related protein 4##AK313029|SFRP4|6424|secreted frizzled-related protein 4##AK303977|SFRP4|6424|secreted frizzled-related protein 4##AK302357|SFRP4|6424|secreted frizzled-related protein 4##BC032828|SFRP4|6424|secreted frizzled-related protein 4##NM_003014|SFRP4|6424|secreted frizzled-related protein 4	0.0	
chr1	212740555	212740736	reg1019488.p2	7.502	+	NM_001030287	-1970	+	TSC_hg19_v1_chr1_+_212606264 AF173937 NM_013349 AK074431 AK223135 AY762102 BC008823 AB126219 AF049672	-134333	+	TSC_hg19_v1_chr1_-_212588248 AK297200 NM_001198862 AK024066 NM_018252	-152393	-	NM_001040619 NM_001206484 NM_001206488 NM_001674 TSC_hg19_v1_chr1_+_212782102 AK294296	41390	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	41462	+	NM_001206486 AB066566 AB078026 AB078027 AB528347 AY313926 AY313927 BT006996 CR450334 DQ892723 DQ895972 AB209032	47762	+	NM_001030287|ATF3|467|activating transcription factor 3##AF173937|NENF|29937|neudesin neurotrophic factor##NM_013349|NENF|29937|neudesin neurotrophic factor##AK074431|NENF|29937|neudesin neurotrophic factor##AK223135|NENF|29937|neudesin neurotrophic factor##AY762102|NENF|29937|neudesin neurotrophic factor##BC008823|NENF|29937|neudesin neurotrophic factor##AB126219|NENF|29937|neudesin neurotrophic factor##AF049672|NENF|29937|neudesin neurotrophic factor##AK297200|TMEM206|55248|transmembrane protein 206##NM_001198862|TMEM206|55248|transmembrane protein 206##AK024066|TMEM206|55248|transmembrane protein 206##NM_018252|TMEM206|55248|transmembrane protein 206##NM_001040619|ATF3|467|activating transcription factor 3##NM_001206484|ATF3|467|activating transcription factor 3##NM_001206488|ATF3|467|activating transcription factor 3##NM_001674|ATF3|467|activating transcription factor 3##AK294296|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3##NM_001206486|ATF3|467|activating transcription factor 3##AB066566|ATF3|467|activating transcription factor 3##AB078026|ATF3|467|activating transcription factor 3##AB078027|ATF3|467|activating transcription factor 3##AY313926|ATF3|467|activating transcription factor 3##AY313927|ATF3|467|activating transcription factor 3##BT006996|ATF3|467|activating transcription factor 3##CR450334|ATF3|467|activating transcription factor 3##DQ892723|ATF3|467|activating transcription factor 3##DQ895972|ATF3|467|activating transcription factor 3##AB209032|ATF3|467|activating transcription factor 3	0.0	
chr5	177034589	177034686	reg1018054.p2	7.502	+	TSC_hg19_v1_chr5_+_177027143 BC007317 NM_007255 BC072403 AY358578 BC062983 AB028600 AK023506 AF142675 DQ893010 DQ896256 AB527637 AJ005382	-7483	+	TSC_hg19_v1_chr5_+_177019199 AK313292 BC001123 NM_017510 AF441399 AK298435	-15403	+	AB067518 TSC_hg19_v1_chr5_-_176981559 NM_001190946	-53089	-	TSC_hg19_v1_chr5_-_177099217 AK297457	64592	-	AB018295 NM_173663	172847	-	AF076215 NM_006261	388605	-	BC007317|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##NM_007255|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC072403|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AY358578|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC062983|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AB028600|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AK023506|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF142675|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ893010|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ896256|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AJ005382|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AK313292|TMED9|54732|transmembrane emp24 protein transport domain containing 9##BC001123|TMED9|54732|transmembrane emp24 protein transport domain containing 9##NM_017510|TMED9|54732|transmembrane emp24 protein transport domain containing 9##AF441399|TMED9|54732|transmembrane emp24 protein transport domain containing 9##AK298435|TMED9|54732|transmembrane emp24 protein transport domain containing 9##AB067518|FAM193B|54540|family with sequence similarity 193, member B##NM_001190946|FAM193B|54540|family with sequence similarity 193, member B##AK297457|LOC202181|202181|chromosome 5 open reading frame 25 pseudogene##AB018295|FAM153A|285596|family with sequence similarity 153, member A##NM_173663|FAM153A|285596|family with sequence similarity 153, member A##AF076215|PROP1|5626|PROP paired-like homeobox 1##NM_006261|PROP1|5626|PROP paired-like homeobox 1	0.910207	CTCF.p2:-14:0.910
chr1	170936336	170936440	reg1018337.p1	7.501	+	NM_001163629 NM_025063 AK027203 BC113390 BC113392	-31741	+	BC074993 NM_006902 NM_022716 EU446648 AB527492 AB451463 TSC_hg19_v1_chr1_+_170633380 M95929	-303026	+	TSC_hg19_v1_chr1_+_170632302 AK225968	-304098	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	123653	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	218034	+	AK290113 AK315100 M64082 NM_002021 AK296198	281273	+	NM_001163629|C1orf129|80133|chromosome 1 open reading frame 129##NM_025063|C1orf129|80133|chromosome 1 open reading frame 129##AK027203|C1orf129|80133|chromosome 1 open reading frame 129##BC113390|C1orf129|80133|chromosome 1 open reading frame 129##BC113392|C1orf129|80133|chromosome 1 open reading frame 129##BC074993|PRRX1|5396|paired related homeobox 1##NM_006902|PRRX1|5396|paired related homeobox 1##NM_022716|PRRX1|5396|paired related homeobox 1##EU446648|PRRX1|5396|paired related homeobox 1##AB451463|PRRX1|5396|paired related homeobox 1##AK225968|PRRX1|5396|paired related homeobox 1##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK290113|FMO1|2326|flavin containing monooxygenase 1##AK315100|FMO1|2326|flavin containing monooxygenase 1##M64082|FMO1|2326|flavin containing monooxygenase 1##NM_002021|FMO1|2326|flavin containing monooxygenase 1##AK296198|FMO1|2326|flavin containing monooxygenase 1	0.995441	CTCF.p2:1:0.983
chr13	45544139	45544270	reg1017602.p2	7.501	+	TSC_hg19_v1_chr13_-_45150604 AB082525 NM_001243799 NM_183422	-393554	-	AK091854 AX747223 TSC_hg19_v1_chr13_-_45150467 BC136475 BC136482	-393774	-	NM_001243798	-495768	-	TSC_hg19_v1_chr13_-_45563607 AB528019 AF159548 BC001436 AK314242 NM_012345	19391	-	TSC_hg19_v1_chr13_+_45563672 AK304669 BC017776 BC039586 NM_018559 AK292493 AF145122 BC032333 AB051491	19520	+	TSC_hg19_v1_chr13_+_45694638 NM_004128 AK291545	150410	+	AB082525|TSC22D1|8848|TSC22 domain family, member 1##NM_001243799|TSC22D1|8848|TSC22 domain family, member 1##NM_183422|TSC22D1|8848|TSC22 domain family, member 1##AK091854|TSC22D1|8848|TSC22 domain family, member 1##BC136475|TSC22D1|8848|TSC22 domain family, member 1##BC136482|TSC22D1|8848|TSC22 domain family, member 1##NM_001243798|TSC22D1|8848|TSC22 domain family, member 1##AF159548|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##BC001436|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AK314242|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##NM_012345|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AK304669|KIAA1704|55425|KIAA1704##BC017776|KIAA1704|55425|KIAA1704##BC039586|KIAA1704|55425|KIAA1704##NM_018559|KIAA1704|55425|KIAA1704##AK292493|KIAA1704|55425|KIAA1704##AF145122|KIAA1704|55425|KIAA1704##BC032333|KIAA1704|55425|KIAA1704##AB051491|KIAA1704|55425|KIAA1704##NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	0.191719	
chr14	56957239	56957387	reg1015816.p1	7.501	+	TSC_hg19_v1_chr14_+_56585163 AF302502	-372139	+	TSC_hg19_v1_chr14_+_56585131 BC009476 NM_021255 AK315727	-372319	+	L25616 TSC_hg19_v1_chr14_+_56078737 AB527439	-878564	+	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	89232	+	NM_172337 AB593056	315050	-	AK314271 BC032579 NM_021728 AB593058	319831	-	AF302502|PELI2|57161|pellino homolog 2 (Drosophila)##BC009476|PELI2|57161|pellino homolog 2 (Drosophila)##NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)##AK315727|PELI2|57161|pellino homolog 2 (Drosophila)##L25616|KTN1|3895|kinectin 1 (kinesin receptor)##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101##NM_172337|OTX2|5015|orthodenticle homeobox 2##AB593056|OTX2|5015|orthodenticle homeobox 2##AK314271|OTX2|5015|orthodenticle homeobox 2##BC032579|OTX2|5015|orthodenticle homeobox 2##NM_021728|OTX2|5015|orthodenticle homeobox 2##AB593058|OTX2|5015|orthodenticle homeobox 2	0.933912	CTCF.p2:-8:0.934
chr1	85725405	85725538	reg1018376.p1	7.501	+	AF387611 AF387612 AY486331 AY486332 BC029538 TSC_hg19_v1_chr1_-_85725338 AK126929 NM_198077	-132	-	NM_032184 TSC_hg19_v1_chr1_-_85666752	-58731	-	NM_145172 AY049724 AK292603 AK054629 BC040265	-197462	+	AK098790 AF105066 AF127386 CU691004 AB527491 EF189176 BC053617 TSC_hg19_v1_chr1_-_85742229 BX647306 AK291346 AF100338 AF057700 AF134395	16664	-	NM_003921	17115	-	BC043235 TSC_hg19_v1_chr1_-_85930637	205154	-	AF387611|C1orf52|148423|chromosome 1 open reading frame 52##AF387612|C1orf52|148423|chromosome 1 open reading frame 52##AY486331|C1orf52|148423|chromosome 1 open reading frame 52##AY486332|C1orf52|148423|chromosome 1 open reading frame 52##BC029538|C1orf52|148423|chromosome 1 open reading frame 52##AK126929|C1orf52|148423|chromosome 1 open reading frame 52##NM_198077|C1orf52|148423|chromosome 1 open reading frame 52##NM_032184|SYDE2|84144|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)##NM_145172|WDR63|126820|WD repeat domain 63##AY049724|WDR63|126820|WD repeat domain 63##AK292603|WDR63|126820|WD repeat domain 63##AK054629|WDR63|126820|WD repeat domain 63##BC040265|WDR63|126820|WD repeat domain 63##AF105066|BCL10|8915|B-cell CLL/lymphoma 10##AF127386|BCL10|8915|B-cell CLL/lymphoma 10##EF189176|BCL10|8915|B-cell CLL/lymphoma 10##BC053617|BCL10|8915|B-cell CLL/lymphoma 10##BX647306|BCL10|8915|B-cell CLL/lymphoma 10##AK291346|BCL10|8915|B-cell CLL/lymphoma 10##AF100338|BCL10|8915|B-cell CLL/lymphoma 10##AF057700|BCL10|8915|B-cell CLL/lymphoma 10##AF134395|BCL10|8915|B-cell CLL/lymphoma 10##NM_003921|BCL10|8915|B-cell CLL/lymphoma 10##BC043235|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1	0.971479	CTCF.p2:-26:0.971
chr2	112570915	112571079	reg1018910.p1	7.501	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-692510	+	AK300513 NM_001142807 BC022268	-1080818	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-1135175	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	70629	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	70764	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	85188	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.994433	CTCF.p2:10:0.994
chr2	113258826	113258944	reg1017661.p2	7.501	+	TSC_hg19_v1_chr2_+_113239813 AB071393 CU691434 DQ894075	-19013	+	TSC_hg19_v1_chr2_+_113239762 NM_153712	-19119	+	TSC_hg19_v1_chr2_+_113239732 BC036819	-19159	+	TSC_hg19_v1_chr2_+_113279582 AK126378	20769	+	AK128044 NM_001137604 NM_019014 AK302814	40666	+	BX647360 BC110833 BC150139 AK294027 TSC_hg19_v1_chr2_+_113300041 AK001678 AK301178 AK022533 BX647683	41034	+	AB071393|TTL|150465|tubulin tyrosine ligase##DQ894075|TTL|150465|tubulin tyrosine ligase##NM_153712|TTL|150465|tubulin tyrosine ligase##BC036819|TTL|150465|tubulin tyrosine ligase##AK126378|TTL|150465|tubulin tyrosine ligase##AK128044|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##NM_001137604|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##NM_019014|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK302814|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BX647360|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BC110833|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BC150139|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK294027|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK001678|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK301178|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK022533|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BX647683|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa	0.222094	CTCF.p2:-2:0.222
chr22	22918941	22919015	reg1015583.p1	7.501	+	BC014074 NM_206955 NM_206956 AK304593 TSC_hg19_v1_chr22_-_22901678 BC039731 U65011 NM_006115 NM_206953 NM_206954 BC022008	-17384	-	BC053901 AK093108 NM_080740	-44374	-	AK097608 NM_080764	-55474	-	NM_199127 X98922 CU686896 BC069534	69820	+	TSC_hg19_v1_chr22_+_23010757 L29162	91782	+	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	110225	+	BC014074|PRAME|23532|preferentially expressed antigen in melanoma##NM_206955|PRAME|23532|preferentially expressed antigen in melanoma##NM_206956|PRAME|23532|preferentially expressed antigen in melanoma##AK304593|PRAME|23532|preferentially expressed antigen in melanoma##BC039731|PRAME|23532|preferentially expressed antigen in melanoma##U65011|PRAME|23532|preferentially expressed antigen in melanoma##NM_006115|PRAME|23532|preferentially expressed antigen in melanoma##NM_206953|PRAME|23532|preferentially expressed antigen in melanoma##NM_206954|PRAME|23532|preferentially expressed antigen in melanoma##BC022008|PRAME|23532|preferentially expressed antigen in melanoma##BC053901|ZNF280A|129025|zinc finger protein 280A##AK093108|ZNF280A|129025|zinc finger protein 280A##NM_080740|ZNF280A|129025|zinc finger protein 280A##AK097608|ZNF280B|140883|zinc finger protein 280B##NM_080764|ZNF280B|140883|zinc finger protein 280B##NM_199127|GGTLC2|91227|gamma-glutamyltransferase light chain 2##X98922|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC069534|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25	0.999784	CTCF.p2:0:1.000
chr6	69488647	69488759	reg1017324.p2	7.501	+	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	-143302	+	AL833240 TSC_hg19_v1_chr6_-_69345026	-143731	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	-889675	-	TSC_hg19_v1_chr6_-_70506472 AB074281	1017774	-	TSC_hg19_v1_chr6_-_70506524 AK290069	1017825	-	AF113224 TSC_hg19_v1_chr6_-_70506799 BC010360 AK225537 AK002102 AK225187	1018084	-	NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##AB074281|LMBRD1|55788|LMBR1 domain containing 1##AK290069|LMBRD1|55788|LMBR1 domain containing 1##AF113224|LMBRD1|55788|LMBR1 domain containing 1##BC010360|LMBRD1|55788|LMBR1 domain containing 1##AK225537|LMBRD1|55788|LMBR1 domain containing 1##AK002102|LMBRD1|55788|LMBR1 domain containing 1##AK225187|LMBRD1|55788|LMBR1 domain containing 1	0.98104	CTCF.p2:-3:0.981
chr16	47175722	47175856	reg1019797.p1	7.499	+	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	-168194	-	CU677459 AF011793 AJ001309 TSC_hg19_v1_chr16_-_47007561	-168267	-	TSC_hg19_v1_chr16_-_47005340 Y13350	-170441	-	AY358718 BC108727 TSC_hg19_v1_chr16_-_47177852 BC098380	2057	-	TSC_hg19_v1_chr16_-_47177902 AK074937 NM_001201477 NM_018092	2133	-	TSC_hg19_v1_chr16_-_47494975 BC006321 DQ893514 DQ896493 AF503339 AK027596	319076	-	AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AJ001309|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AY358718|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC108727|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC098380|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##AK074937|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_001201477|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_018092|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC006321|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ893514|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ896493|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF503339|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK027596|ITFG1|81533|integrin alpha FG-GAP repeat containing 1	0.0	
chr10	121066243	121066384	reg1018747.p2	7.498	+	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-99052	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-127966	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-128010	-	NM_002925	229731	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	235877	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	289795	-	BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.026778	
chr17	76704717	76704848	reg1018033.p2	7.498	+	NM_173628	-131307	-	TSC_hg19_v1_chr17_+_76374729 AK316147 AK307874 AK296882 AK024529 AK225030 AK316405 BC108732 NM_024419 BC035662 AK297156 BC008903 BC015570 BC025951	-330052	+	TSC_hg19_v1_chr17_-_76356159 AK309756 AK314212 BC060858 NM_003955	-348625	-	AK316277 TSC_hg19_v1_chr17_-_76719649	14865	-	TSC_hg19_v1_chr17_-_76719676 AK293894	14969	-	TSC_hg19_v1_chr17_-_76732958 AK311535	28216	-	NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17##AK316147|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK307874|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK296882|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK024529|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK225030|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK316405|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC108732|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_024419|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC035662|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK297156|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC008903|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC015570|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC025951|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK309756|SOCS3|9021|suppressor of cytokine signaling 3##AK314212|SOCS3|9021|suppressor of cytokine signaling 3##BC060858|SOCS3|9021|suppressor of cytokine signaling 3##NM_003955|SOCS3|9021|suppressor of cytokine signaling 3##AK316277|CYTH1|9267|cytohesin 1##AK293894|CYTH1|9267|cytohesin 1	0.076061	
chr3	128880495	128880636	reg1019496.p1	7.498	+	TSC_hg19_v1_chr3_-_128879907 AB032986 BC004442 BC007409 BC019849 NM_001199469 NM_001204890 NM_020701	-593	-	NM_001204884 TSC_hg19_v1_chr3_-_128840874 NM_001204883	-39641	-	TSC_hg19_v1_chr3_-_128840648 AY166852 NM_001204886 NM_001204887 NM_001204888 NM_198490 NM_001204885	-39881	-	TSC_hg19_v1_chr3_-_128890551 BT019613 CU674132 AB463471	10011	-	TSC_hg19_v1_chr3_-_128902740 M28372 BC093058 AK314380 BC014911 DQ091187 DQ092366 DQ092367 AK292119 AK298154	22147	-	AK054592 TSC_hg19_v1_chr3_-_128902766 BC000288 NM_001127192 NM_001127193 NM_001127194 NM_001127195 NM_001127196 NM_003418	22253	-	AB032986|ISY1-RAB43|100534599|ISY1-RAB43 readthrough##BC004442|ISY1|57461|ISY1 splicing factor homolog (S. cerevisiae)##BC007409|ISY1|57461|ISY1 splicing factor homolog (S. cerevisiae)##BC019849|ISY1|57461|ISY1 splicing factor homolog (S. cerevisiae)##NM_001199469|ISY1|57461|ISY1 splicing factor homolog (S. cerevisiae)##NM_001204890|ISY1-RAB43|100534599|ISY1-RAB43 readthrough##NM_020701|ISY1|57461|ISY1 splicing factor homolog (S. cerevisiae)##NM_001204884|RAB43|339122|RAB43, member RAS oncogene family##NM_001204883|RAB43|339122|RAB43, member RAS oncogene family##AY166852|RAB43|339122|RAB43, member RAS oncogene family##NM_001204886|RAB43|339122|RAB43, member RAS oncogene family##NM_001204887|RAB43|339122|RAB43, member RAS oncogene family##NM_001204888|RAB43|339122|RAB43, member RAS oncogene family##NM_198490|RAB43|339122|RAB43, member RAS oncogene family##NM_001204885|RAB43|339122|RAB43, member RAS oncogene family##BT019613|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##M28372|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##BC093058|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##AK314380|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##BC014911|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##DQ091187|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##DQ092366|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##DQ092367|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##AK292119|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##AK298154|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##AK054592|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##BC000288|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##NM_001127192|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##NM_001127193|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##NM_001127194|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##NM_001127195|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##NM_001127196|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein##NM_003418|CNBP|7555|CCHC-type zinc finger, nucleic acid binding protein	0.0	
chr6	112042993	112043129	reg1018136.p1	7.498	+	AB451293 AB451426 AB528738 CU689398 S74774 NM_153047	-1803	-	NM_001164281 NM_147686	-115588	-	TSC_hg19_v1_chr6_-_111927082 AL050289 AK310141 AF136406 AF136407	-115889	-	BC032496 NM_153048	37247	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	151474	-	TSC_hg19_v1_chr6_-_112194648 NM_002037	151594	-	AB451293|FYN|2534|FYN oncogene related to SRC, FGR, YES##AB451426|FYN|2534|FYN oncogene related to SRC, FGR, YES##S74774|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153047|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_001164281|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_147686|TRAF3IP2|10758|TRAF3 interacting protein 2##AL050289|TRAF3IP2|10758|TRAF3 interacting protein 2##AK310141|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136406|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136407|TRAF3IP2|10758|TRAF3 interacting protein 2##BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_002037|FYN|2534|FYN oncogene related to SRC, FGR, YES	0.0	
chr6	150161836	150161967	reg1017791.p1	7.498	+	TSC_hg19_v1_chr6_+_150070878 AK289724 BC007501 D13892 AK304532 AK129778 BC008748 D25545 D25546 D25547 M93008 CU675673	-90955	+	TSC_hg19_v1_chr6_+_150070845 AK098739	-91054	+	TSC_hg19_v1_chr6_+_150070835 NM_001252049 NM_001252050 NM_001252051 NM_001252052 NM_001252053 NM_005389	-91074	+	AK027641 AK223134 TSC_hg19_v1_chr6_-_150185169	23289	-	TSC_hg19_v1_chr6_-_150185496 BC025239 BC043141 NM_032832	23542	-	AY054974 AY176317 AY252119 EF489426 AF359243 BC101976 BC103694 AY069961 NM_001243325 NM_001243327 NM_139165	50201	-	AK289724|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##BC007501|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D13892|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK304532|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK129778|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##BC008748|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D25545|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D25546|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D25547|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##M93008|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK098739|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252049|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252050|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252051|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252052|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252053|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_005389|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK027641|LRP11|84918|low density lipoprotein receptor-related protein 11##AK223134|LRP11|84918|low density lipoprotein receptor-related protein 11##BC025239|LRP11|84918|low density lipoprotein receptor-related protein 11##BC043141|LRP11|84918|low density lipoprotein receptor-related protein 11##NM_032832|LRP11|84918|low density lipoprotein receptor-related protein 11##AY054974|RAET1E|135250|retinoic acid early transcript 1E##AY176317|RAET1E|135250|retinoic acid early transcript 1E##AY252119|RAET1E|135250|retinoic acid early transcript 1E##EF489426|RAET1E|135250|retinoic acid early transcript 1E##AF359243|RAET1E|135250|retinoic acid early transcript 1E##BC101976|RAET1E|135250|retinoic acid early transcript 1E##BC103694|RAET1E|135250|retinoic acid early transcript 1E##AY069961|RAET1E|135250|retinoic acid early transcript 1E##NM_001243325|RAET1E|135250|retinoic acid early transcript 1E##NM_001243327|RAET1E|135250|retinoic acid early transcript 1E##NM_139165|RAET1E|135250|retinoic acid early transcript 1E	0.924015	CTCF.p2:-5:0.924
chr8	105265782	105265910	reg1019938.p1	7.498	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	-434271	+	AK126939 NM_001100117	-752871	+	TSC_hg19_v1_chr8_+_104427659 AK001874	-838181	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	86206	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	213369	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	335329	-	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK001874|DCAF13|25879|DDB1 and CUL4 associated factor 13##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12	0.01025	
chr12	13361509	13361624	reg1016127.p1	7.497	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-11837	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-11849	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-11928	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	771420	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	1157069	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	1176706	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.024495	
chr20	62427610	62427723	reg1017279.p1	7.497	+	TSC_hg19_v1_chr20_+_62372460 AK298304 BC017446	-55146	+	TSC_hg19_v1_chr20_+_62371761 AB044786 BC001402	-55913	+	TSC_hg19_v1_chr20_+_62371629 AB044777	-56028	+	AK131482 NM_025224	9189	-	TSC_hg19_v1_chr20_-_62462618 BC052269 BC073800	34931	-	NM_080622	64899	+	AK298304|SLC2A4RG|56731|SLC2A4 regulator##BC017446|SLC2A4RG|56731|SLC2A4 regulator##AB044786|SLC2A4RG|56731|SLC2A4 regulator##BC001402|SLC2A4RG|56731|SLC2A4 regulator##AB044777|SLC2A4RG|56731|SLC2A4 regulator##AK131482|ZBTB46|140685|zinc finger and BTB domain containing 46##NM_025224|ZBTB46|140685|zinc finger and BTB domain containing 46##BC052269|ZBTB46|140685|zinc finger and BTB domain containing 46##BC073800|ZBTB46|140685|zinc finger and BTB domain containing 46##NM_080622|ABHD16B|140701|abhydrolase domain containing 16B	0.999722	CTCF.p2:7:1.000
chr2	242158313	242158440	reg1016405.p1	7.497	+	AY617079 AY617080 NM_001001666 NM_001001891	-30453	+	AK294043 TSC_hg19_v1_chr2_+_242089896 BC013001 BC000910 NM_002712 Z50749 BC012397 AB385583 BT007296 BT020134	-68485	+	CR749231 NM_001252120	-68983	-	TSC_hg19_v1_chr2_-_242212216 M64098	53844	-	TSC_hg19_v1_chr2_-_242212245 AK300312 NM_001243900 NM_203346	53868	-	TSC_hg19_v1_chr2_-_242212511 AK309075	54140	-	AY617079|ANO7|50636|anoctamin 7##AY617080|ANO7|50636|anoctamin 7##NM_001001666|ANO7|50636|anoctamin 7##NM_001001891|ANO7|50636|anoctamin 7##AK294043|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC013001|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC000910|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##NM_002712|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##Z50749|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC012397|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT007296|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT020134|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##CR749231|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252120|PASK|23178|PAS domain containing serine/threonine kinase##M64098|HDLBP|3069|high density lipoprotein binding protein##AK300312|HDLBP|3069|high density lipoprotein binding protein##NM_001243900|HDLBP|3069|high density lipoprotein binding protein##NM_203346|HDLBP|3069|high density lipoprotein binding protein##AK309075|HDLBP|3069|high density lipoprotein binding protein	0.662433	CTCF.p2:11:0.662
chr3	38339774	38339917	reg1019966.p1	7.497	+	NM_004256 AK315301 BC035973 AB010438 CU690244 AK298375	-32499	+	TSC_hg19_v1_chr3_+_38263077 AF087893	-76762	+	TSC_hg19_v1_chr3_+_38207257 AB029024 AB384561 CU679061 DQ893255 DQ896584	-132539	+	AB011082 BC126482 BC130543 BC144079 NM_004803 BC075070 BC075071 HQ258465	7626	+	TSC_hg19_v1_chr3_+_38388285 AB015046 BC039712 NM_005108	48408	+	TSC_hg19_v1_chr3_+_38388288 BC052984	48445	+	NM_004256|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AK315301|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##BC035973|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AB010438|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AK298375|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AF087893|OXSR1|9943|oxidative-stress responsive 1##AB029024|OXSR1|9943|oxidative-stress responsive 1##DQ893255|OXSR1|9943|oxidative-stress responsive 1##DQ896584|OXSR1|9943|oxidative-stress responsive 1##AB011082|SLC22A14|9389|solute carrier family 22, member 14##BC126482|SLC22A14|9389|solute carrier family 22, member 14##BC130543|SLC22A14|9389|solute carrier family 22, member 14##BC144079|SLC22A14|9389|solute carrier family 22, member 14##NM_004803|SLC22A14|9389|solute carrier family 22, member 14##BC075070|SLC22A14|9389|solute carrier family 22, member 14##BC075071|SLC22A14|9389|solute carrier family 22, member 14##HQ258465|SLC22A14|9389|solute carrier family 22, member 14##AB015046|XYLB|9942|xylulokinase homolog (H. influenzae)##BC039712|XYLB|9942|xylulokinase homolog (H. influenzae)##NM_005108|XYLB|9942|xylulokinase homolog (H. influenzae)##BC052984|XYLB|9942|xylulokinase homolog (H. influenzae)	0.090365	
chr5	94597173	94597282	reg1017274.p2	7.497	+	NM_001002796	-179683	-	AY656716 AK058012 BC030005 AK057694 TSC_hg19_v1_chr5_-_94417350	-179959	-	AK025997 TSC_hg19_v1_chr5_-_94224607	-372621	-	TSC_hg19_v1_chr5_-_94620306 AY656715 NM_024717	23066	-	BC034772 NM_152548 AK058062	129828	+	TSC_hg19_v1_chr5_-_94890682 BC009767 AK307531 BC030966 BC056893 AB002370 NM_014639	293460	-	NM_001002796|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1##AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1##BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1##AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1##AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656715|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_024717|MCTP1|79772|multiple C2 domains, transmembrane 1##BC034772|FAM81B|153643|family with sequence similarity 81, member B##NM_152548|FAM81B|153643|family with sequence similarity 81, member B##AK058062|FAM81B|153643|family with sequence similarity 81, member B##BC009767|TTC37|9652|tetratricopeptide repeat domain 37##AK307531|TTC37|9652|tetratricopeptide repeat domain 37##BC030966|TTC37|9652|tetratricopeptide repeat domain 37##BC056893|TTC37|9652|tetratricopeptide repeat domain 37##AB002370|TTC37|9652|tetratricopeptide repeat domain 37##NM_014639|TTC37|9652|tetratricopeptide repeat domain 37	0.0	
chrX	114925068	114925161	reg1017665.p1	7.497	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-97246	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-128072	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-129508	+	BC003645 TSC_hg19_v1_chrX_-_115085443	160325	-	AK313927 NM_000686 X87723 U16957	376881	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	642653	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.999517	CTCF.p2:13:1.000
chr10	105365598	105365730	reg1020538.p1	7.496	+	AK299620 TSC_hg19_v1_chr10_+_105344798	-20897	+	NM_004210 U87864	-111930	+	BC043367 NM_001129742	-126668	-	AB385330 TSC_hg19_v1_chr10_-_105420936	55244	-	TSC_hg19_v1_chr10_-_105421464 AK294454	55785	-	TSC_hg19_v1_chr10_-_105437934 AK304828	72257	-	AK299620|NEURL|9148|neuralized homolog (Drosophila)##NM_004210|NEURL|9148|neuralized homolog (Drosophila)##U87864|NEURL|9148|neuralized homolog (Drosophila)##BC043367|CALHM3|119395|calcium homeostasis modulator 3##NM_001129742|CALHM3|119395|calcium homeostasis modulator 3##AK294454|SH3PXD2A|9644|SH3 and PX domains 2A##AK304828|SH3PXD2A|9644|SH3 and PX domains 2A	0.271165	CTCF.p2:-20:0.271
chr16	9352459	9352575	reg1015007.p1	7.496	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-166914	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-166977	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-295222	-	BC143273 U09002 NM_001134408	923316	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	923671	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	924160	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.998356	CTCF.p2:-17:0.998
chr3	15599174	15599340	reg1012174.p2	7.495	+	BC126363 BC144004 BC074828 BC074829 TSC_hg19_v1_chr3_-_15563197 AY150334 AY150335 AY150336 AY150337 AY150338 AY150339 AJ225895 AF057036 NM_005677 NM_080539 AK289688	-36039	-	AK128401 NM_080538	-58879	-	TSC_hg19_v1_chr3_+_15469073 NM_033083 AK312330 AK304697 BC041329 AF272973 CU691982	-130089	+	DQ895558 EU176367 AF161397 TSC_hg19_v1_chr3_-_15643040	43747	-	BC007440 TSC_hg19_v1_chr3_-_15643077 AJ131753 AK056977 AK299287 AK301546 AK302086 BC001627 AK301990 NM_012260	43839	-	AK297033 TSC_hg19_v1_chr3_+_15643251 NM_000060 AK313252 AK294301 U03274 BC012099 CU680214	43991	+	BC126363|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC144004|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC074828|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC074829|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150334|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150335|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150336|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150337|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150338|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150339|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AJ225895|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AF057036|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_005677|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080539|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AK289688|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_033083|EAF1|85403|ELL associated factor 1##AK312330|EAF1|85403|ELL associated factor 1##AK304697|EAF1|85403|ELL associated factor 1##BC041329|EAF1|85403|ELL associated factor 1##AF272973|EAF1|85403|ELL associated factor 1##DQ895558|HACL1|26061|2-hydroxyacyl-CoA lyase 1##EU176367|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AF161397|HACL1|26061|2-hydroxyacyl-CoA lyase 1##BC007440|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AJ131753|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK056977|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK301546|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK302086|HACL1|26061|2-hydroxyacyl-CoA lyase 1##BC001627|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK301990|HACL1|26061|2-hydroxyacyl-CoA lyase 1##NM_012260|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK297033|BTD|686|biotinidase##NM_000060|BTD|686|biotinidase##AK313252|BTD|686|biotinidase##AK294301|BTD|686|biotinidase##U03274|BTD|686|biotinidase##BC012099|BTD|686|biotinidase	0.016153	
chr4	190825691	190825799	reg1019557.p2	7.495	+	AK093499 AX748169 NM_178556 BC113860 BC114469	-1765125	+	BC111959 BC111961 BC143709 AK098667 NM_173553	-1799341	-	AK056719 AY429593 NM_174900	-1908821	+	L76159 NM_004477 AK291890 BC053997 TSC_hg19_v1_chr4_+_190862026	36262	+	TSC_hg19_v1_chr4_+_190862048 CU691066	36360	+	BC144572 AY714545 NM_001005217 NM_001199232	122658	-	AK093499|TRIML1|339976|tripartite motif family-like 1##NM_178556|TRIML1|339976|tripartite motif family-like 1##BC113860|TRIML1|339976|tripartite motif family-like 1##BC114469|TRIML1|339976|tripartite motif family-like 1##BC111959|TRIML2|205860|tripartite motif family-like 2##BC111961|TRIML2|205860|tripartite motif family-like 2##BC143709|TRIML2|205860|tripartite motif family-like 2##AK098667|TRIML2|205860|tripartite motif family-like 2##NM_173553|TRIML2|205860|tripartite motif family-like 2##AK056719|ZFP42|132625|zinc finger protein 42 homolog (mouse)##AY429593|ZFP42|132625|zinc finger protein 42 homolog (mouse)##NM_174900|ZFP42|132625|zinc finger protein 42 homolog (mouse)##L76159|FRG1|2483|FSHD region gene 1##NM_004477|FRG1|2483|FSHD region gene 1##AK291890|FRG1|2483|FSHD region gene 1##BC053997|FRG1|2483|FSHD region gene 1##BC144572|FRG2|448831|FSHD region gene 2##AY714545|FRG2|448831|FSHD region gene 2##NM_001005217|FRG2|448831|FSHD region gene 2##NM_001199232|LOC100288255|100288255|FSHD region gene 2-like	1.710159	CTCF.p2:15:0.930	CTCF.p2:36:0.780
chr6	6585049	6585195	reg1019300.p1	7.494	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-264212	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-264237	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-577425	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	3828	+	BC039678 TSC_hg19_v1_chr6_+_6725205	140039	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	522704	+	NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1	0.991001	CTCF.p2:-15:0.991
chr1	203594883	203595028	reg1021281.p1	7.493	+	AJ133790 AY077681 NM_014359 AF161702	-131674	+	U29089 BC032498 TSC_hg19_v1_chr1_+_203444965	-149995	+	NM_002725 NM_201348 TSC_hg19_v1_chr1_+_203444937	-150046	+	TSC_hg19_v1_chr1_+_203595922 NM_001001396 NM_001684	954	+	TSC_hg19_v1_chr1_+_203595959 CR936708 CR749393	1004	+	TSC_hg19_v1_chr1_+_203596243 BC140774	1277	+	AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin##U29089|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##BC032498|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_002725|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_201348|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_001001396|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_001684|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR936708|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR749393|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##BC140774|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4	0.0	
chr4	81136728	81136834	reg1016419.p1	7.493	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	-18127	+	AF275815 NM_020226	-30358	+	TSC_hg19_v1_chr4_-_80994394 NM_001145794 NM_058172 BC107876	-142314	-	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	51078	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	120116	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	815361	+	NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##AF275815|PRDM8|56978|PR domain containing 8##NM_020226|PRDM8|56978|PR domain containing 8##NM_001145794|ANTXR2|118429|anthrax toxin receptor 2##NM_058172|ANTXR2|118429|anthrax toxin receptor 2##BC107876|ANTXR2|118429|anthrax toxin receptor 2##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3	0.995903	CTCF.p2:11:0.996
chr1	104675114	104675234	reg1018179.p1	7.492	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-382672	+	NM_001008221 AK292341	-382896	+	AK292341 NM_001008221	-436103	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	2924191	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	3007568	+	AB023193 TSC_hg19_v1_chr1_+_107683657	3008430	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.017484	
chr1	149860079	149860205	reg1019073.p2	7.492	+	NM_175065 TSC_hg19_v1_chr1_-_149859514 AK289725 BC132811	-629	-	TSC_hg19_v1_chr1_+_149858467 BC060324 EU446979 NM_003517	-1647	+	M60756 BC096121 BC098112 BC098289 CR541895 BC107084 BC107085 CU686710 AB590615 BC005827 BC069193 AK093747 TSC_hg19_v1_chr1_-_149858233 NM_003528	-1967	-	NM_016074 AK313014 BC002771 BC063405 AF151901	11035	+	TSC_hg19_v1_chr1_-_149889397 AB018279 BC045111 AK291718 AK075480 BX537754 BC034038 NM_014849	29262	-	TSC_hg19_v1_chr1_-_149899667 CU680692 DQ892971 DQ896220 EU176749 AB528332 AK223322 BC004273 BC013886 AK310495	39504	-	NM_175065|HIST2H2AB|317772|histone cluster 2, H2ab##AK289725|HIST2H2BE|8349|histone cluster 2, H2be##BC060324|HIST2H2AC|8338|histone cluster 2, H2ac##EU446979|HIST2H2AC|8338|histone cluster 2, H2ac##NM_003517|HIST2H2AC|8338|histone cluster 2, H2ac##M60756|HIST2H2BE|8349|histone cluster 2, H2be##BC096121|HIST2H2BE|8349|histone cluster 2, H2be##BC098112|HIST2H2BE|8349|histone cluster 2, H2be##BC098289|HIST2H2BE|8349|histone cluster 2, H2be##CR541895|HIST2H2BE|8349|histone cluster 2, H2be##BC107084|HIST2H2BE|8349|histone cluster 2, H2be##BC107085|HIST2H2BE|8349|histone cluster 2, H2be##BC005827|HIST2H2BE|8349|histone cluster 2, H2be##BC069193|HIST2H2BE|8349|histone cluster 2, H2be##AK093747|HIST2H2BE|8349|histone cluster 2, H2be##NM_003528|HIST2H2BE|8349|histone cluster 2, H2be##NM_016074|BOLA1|51027|bolA homolog 1 (E. coli)##AK313014|BOLA1|51027|bolA homolog 1 (E. coli)##BC002771|BOLA1|51027|bolA homolog 1 (E. coli)##BC063405|BOLA1|51027|bolA homolog 1 (E. coli)##AF151901|BOLA1|51027|bolA homolog 1 (E. coli)##AB018279|SV2A|9900|synaptic vesicle glycoprotein 2A##BC045111|SV2A|9900|synaptic vesicle glycoprotein 2A##AK291718|SV2A|9900|synaptic vesicle glycoprotein 2A##AK075480|SV2A|9900|synaptic vesicle glycoprotein 2A##BX537754|SV2A|9900|synaptic vesicle glycoprotein 2A##BC034038|SV2A|9900|synaptic vesicle glycoprotein 2A##NM_014849|SV2A|9900|synaptic vesicle glycoprotein 2A##DQ892971|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa##DQ896220|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa##EU176749|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa##AK223322|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa##BC004273|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa##BC013886|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa##AK310495|SF3B4|10262|splicing factor 3b, subunit 4, 49kDa	0.885563	CTCF.p2:4:0.886
chr3	194315541	194315657	reg1017833.p1	7.492	+	TSC_hg19_v1_chr3_+_194304750 AK124168	-10866	+	TSC_hg19_v1_chr3_+_194207865 AK091527	-107797	+	NM_024524	-126632	-	BX647418 TSC_hg19_v1_chr3_-_194353941 HQ258241	38327	-	BC014883 TSC_hg19_v1_chr3_-_194354101 BC130297 BC144158 BC144159 BC111485 NM_001011655 NM_001166305 NM_001166306 NM_138399	38509	-	TSC_hg19_v1_chr3_-_194354410 AK126914 BC039506	38764	-	AK091527|FLJ34208|401106|uncharacterized LOC401106##NM_024524|ATP13A3|79572|ATPase type 13A3##BX647418|TMEM44|93109|transmembrane protein 44##HQ258241|TMEM44|93109|transmembrane protein 44##BC014883|TMEM44|93109|transmembrane protein 44##BC130297|TMEM44|93109|transmembrane protein 44##BC144158|TMEM44|93109|transmembrane protein 44##BC144159|TMEM44|93109|transmembrane protein 44##BC111485|TMEM44|93109|transmembrane protein 44##NM_001011655|TMEM44|93109|transmembrane protein 44##NM_001166305|TMEM44|93109|transmembrane protein 44##NM_001166306|TMEM44|93109|transmembrane protein 44##NM_138399|TMEM44|93109|transmembrane protein 44##AK126914|TMEM44|93109|transmembrane protein 44##BC039506|TMEM44|93109|transmembrane protein 44	0.998	CTCF.p2:19:0.998
chr10	24906821	24906926	reg1016135.p1	7.491	+	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	-151404	+	TSC_hg19_v1_chr10_+_24755441 AK300422	-151429	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	-408779	+	AK307604 TSC_hg19_v1_chr10_-_25012174	105300	-	AF480466 NM_020824 TSC_hg19_v1_chr10_-_25012632	105733	-	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	334659	-	BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217##AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21##AF480466|ARHGAP21|57584|Rho GTPase activating protein 21##NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21##AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	0.990115	CTCF.p2:5:0.990
chr3	64009204	64009330	reg1018793.p1	7.491	+	AF530062 AB463196 TSC_hg19_v1_chr3_-_64009149 BC000630 AK095059 AY568086 D14663 NM_014814 BC012369 BC000904 AK290205 BX647742 AF215935	-117	-	NM_001128149 AK310745 AK304062	-55810	+	NM_001177387	-125193	+	BC119002 AL833539 NM_198859	201853	-	AK057923 TSC_hg19_v1_chr3_+_64670789 BC040632	661524	+	AB037733 TSC_hg19_v1_chr3_-_64672299	663028	-	AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_001128149|ATXN7|6314|ataxin 7##AK310745|ATXN7|6314|ataxin 7##AK304062|ATXN7|6314|ataxin 7##NM_001177387|ATXN7|6314|ataxin 7##BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)##NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AK057923|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##BC040632|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	0.864323	CTCF.p2:-34:0.864
chr6	5402706	5402847	reg1018639.p1	7.491	+	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-141086	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-141514	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-141610	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	604365	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	604921	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	918109	-	NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide	0.976704	CTCF.p2:2:0.977
chrX	65330115	65330239	reg1016288.p1	7.491	+	DQ891770 DQ894953 BC010525 AJ132502 AK293215 AK298389 AK075153 AK297050 AK301417 AK075171 NM_001100431 NM_001184830 NM_001184831 NM_007268	-70275	-	TSC_hg19_v1_chrX_+_65235302 DQ680071 DQ680072	-94886	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	-442529	+	NM_138737 TSC_hg19_v1_chrX_+_65382512	52298	+	TSC_hg19_v1_chrX_+_65382627 BC011561	52467	+	NM_001130860 AK311043 AB014598 NM_014799 AY358990 AK307761	53965	+	DQ891770|VSIG4|11326|V-set and immunoglobulin domain containing 4##DQ894953|VSIG4|11326|V-set and immunoglobulin domain containing 4##BC010525|VSIG4|11326|V-set and immunoglobulin domain containing 4##AJ132502|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK293215|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK298389|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075153|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK297050|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK301417|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075171|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001100431|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184830|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184831|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_007268|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin##NM_138737|HEPH|9843|hephaestin##BC011561|HEPH|9843|hephaestin##NM_001130860|HEPH|9843|hephaestin##AK311043|HEPH|9843|hephaestin##AB014598|HEPH|9843|hephaestin##NM_014799|HEPH|9843|hephaestin##AY358990|HEPH|9843|hephaestin##AK307761|HEPH|9843|hephaestin	0.074761	
chr11	58668377	58668518	reg1021310.p1	7.490	+	BC021682 NM_145016 BC016789	-56459	-	AF023466 BC009785 NM_005838 NM_201648	-169040	-	BC069167 NM_000614 BC068030 AK314118 BC074963 BC074964 CU686605 S72921	-278262	+	NM_001220494 AK300479 BC008353	26690	+	AK091965 AX747281 DQ084381 NM_001220496 NM_080661 AK055818	42305	+	TSC_hg19_v1_chr11_+_58874641 BC062456 NM_001142703 NM_001142704 NM_198947 BC005998 AK304258 AY457926 AK303520	206215	+	BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2##AF023466|GLYAT|10249|glycine-N-acyltransferase##BC009785|GLYAT|10249|glycine-N-acyltransferase##NM_005838|GLYAT|10249|glycine-N-acyltransferase##NM_201648|GLYAT|10249|glycine-N-acyltransferase##BC069167|CNTF|1270|ciliary neurotrophic factor##NM_000614|CNTF|1270|ciliary neurotrophic factor##BC068030|CNTF|1270|ciliary neurotrophic factor##AK314118|CNTF|1270|ciliary neurotrophic factor##BC074963|CNTF|1270|ciliary neurotrophic factor##BC074964|CNTF|1270|ciliary neurotrophic factor##S72921|CNTF|1270|ciliary neurotrophic factor##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK091965|GLYATL1|92292|glycine-N-acyltransferase-like 1##DQ084381|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220496|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_080661|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK055818|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC062456|FAM111B|374393|family with sequence similarity 111, member B##NM_001142703|FAM111B|374393|family with sequence similarity 111, member B##NM_001142704|FAM111B|374393|family with sequence similarity 111, member B##NM_198947|FAM111B|374393|family with sequence similarity 111, member B##BC005998|FAM111B|374393|family with sequence similarity 111, member B##AK304258|FAM111B|374393|family with sequence similarity 111, member B##AY457926|FAM111B|374393|family with sequence similarity 111, member B##AK303520|FAM111B|374393|family with sequence similarity 111, member B	0.986054	CTCF.p2:4:0.986
chr2	73383862	73383973	reg1018726.p2	7.490	+	TSC_hg19_v1_chr2_-_73340101 AF334812 AB020664 NM_015470	-43808	-	TSC_hg19_v1_chr2_-_73340066 BC035013	-43853	-	DQ890991 DQ894168 TSC_hg19_v1_chr2_-_73339998 BC099902	-43933	-	AK295936 NM_001134462 AK316410	45490	+	TSC_hg19_v1_chr2_+_73441372 NM_006062 AK300779 AK301809 BC073806 AB527925 U50383	57488	+	TSC_hg19_v1_chr2_-_73460365 AY358605 BC005069 NM_032319 AK312077	76447	-	AF334812|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##AB020664|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##NM_015470|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##BC035013|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##DQ890991|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##DQ894168|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##BC099902|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##AK295936|NOTO|344022|notochord homeobox##NM_001134462|NOTO|344022|notochord homeobox##AK316410|NOTO|344022|notochord homeobox##NM_006062|SMYD5|10322|SMYD family member 5##AK300779|SMYD5|10322|SMYD family member 5##AK301809|SMYD5|10322|SMYD family member 5##BC073806|SMYD5|10322|SMYD family member 5##U50383|SMYD5|10322|SMYD family member 5##AY358605|PRADC1|84279|protease-associated domain containing 1##BC005069|PRADC1|84279|protease-associated domain containing 1##NM_032319|PRADC1|84279|protease-associated domain containing 1##AK312077|PRADC1|84279|protease-associated domain containing 1	0.50909	CTCF.p2:1:0.509
chr11	34196129	34196274	reg1000056.p3	7.489	+	TSC_hg19_v1_chr11_+_34127208 AK294044 AL136882 AK001636 BC014440 BC020205	-68951	+	NM_001144030 NM_024662 TSC_hg19_v1_chr11_+_34127175 AK022241 AK225341 BC035558 AB051496	-69044	+	TSC_hg19_v1_chr11_+_34073956 EU176359 EU176467 EU176701	-122164	+	TSC_hg19_v1_chr11_-_34379556 AK291744 NM_145804	183354	-	TSC_hg19_v1_chr11_+_34460487 AK291585 NM_001752 BC110398 AK315350 X04076 BC112217 BC112219	264273	+	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	264348	+	AK294044|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AL136882|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK001636|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC014440|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC020205|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_001144030|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_024662|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK022241|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK225341|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC035558|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AB051496|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##EU176359|CAPRIN1|4076|cell cycle associated protein 1##EU176467|CAPRIN1|4076|cell cycle associated protein 1##EU176701|CAPRIN1|4076|cell cycle associated protein 1##AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##AK291585|CAT|847|catalase##NM_001752|CAT|847|catalase##BC110398|CAT|847|catalase##AK315350|CAT|847|catalase##X04076|CAT|847|catalase##BC112217|CAT|847|catalase##BC112219|CAT|847|catalase##AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase	0.0	
chr1	31933020	31933148	reg1019282.p1	7.489	+	AK093784 AK316357 AX748305 NM_001199039 NM_018565 AK296118	-46397	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	-47018	+	NM_001199037 AK298512	-50051	+	NM_001204414 NM_022164 TSC_hg19_v1_chr1_+_32042115 AK292770 AK075398 AK296322 AK298382	109019	+	TSC_hg19_v1_chr1_+_32042122 AY358421	109038	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	109058	+	AK093784|SERINC2|347735|serine incorporator 2##AK316357|SERINC2|347735|serine incorporator 2##NM_001199039|SERINC2|347735|serine incorporator 2##NM_018565|SERINC2|347735|serine incorporator 2##AK296118|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##NM_001204414|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_022164|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK292770|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK075398|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK296322|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298382|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AY358421|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1	0.394039	CTCF.p2:-21:0.394
chr16	84096458	84096580	reg1019891.p1	7.489	+	NM_001080442	-20758	-	TSC_hg19_v1_chr16_+_84002230 AY299331 NM_019065 BC131615 AK127376	-94307	+	NM_182981 TSC_hg19_v1_chr16_+_83986844 AK290383 AY258068 AY037158 BC020434 BC032476 BC093687 BC113417	-109635	+	TSC_hg19_v1_chr16_-_84150441 AK291773 BC114555 BC114961 AK299067	53893	-	TSC_hg19_v1_chr16_-_84150449 BC026330 D42053 NM_003791	53997	-	TSC_hg19_v1_chr16_+_84150646 BC052334	54132	+	NM_001080442|SLC38A8|146167|solute carrier family 38, member 8##AY299331|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_019065|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##BC131615|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##AK127376|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_182981|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK290383|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY258068|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY037158|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC020434|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC032476|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC093687|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC113417|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK291773|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114555|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114961|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##AK299067|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC026330|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##D42053|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##NM_003791|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC052334|LOC729887|729887|uncharacterized LOC729887	0.993959	CTCF.p2:17:0.994
chr6	347431	347612	reg1017747.p2	7.489	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-55024	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-55436	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	44243	+	AF508547 BC101697 BC101699 NM_148959	309432	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	345569	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.015417	
chr8	104776665	104776787	reg1018835.p2	7.489	+	AK126939 NM_001100117	-263751	+	TSC_hg19_v1_chr8_+_104427659 AK001874	-349061	+	TSC_hg19_v1_chr8_+_104427646 AK001693	-349080	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	54849	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	575326	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	702489	-	AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK001874|DCAF13|25879|DDB1 and CUL4 associated factor 13##AK001693|DCAF13|25879|DDB1 and CUL4 associated factor 13##NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase	0.865325	CTCF.p2:-13:0.865
chr10	94674333	94674484	reg1018624.p1	7.487	+	AK293857 NM_019053 AF220217 TSC_hg19_v1_chr10_+_94608276 AL832501 EF571007 AK315544 BC028395 CU688490 EU832839 GQ129240	-66151	+	NM_001013848	-79939	+	TSC_hg19_v1_chr10_+_94449711 NM_002729 AK309463 AK314891 BC014336 BC015110 L16499 X67235 AB528006 BC050638 EU446478	-224699	+	AY356349 NM_183374	146612	+	AK027560 NM_057157	158823	+	AK075374 NM_000783 AF005418	159248	+	AK293857|EXOC6|54536|exocyst complex component 6##NM_019053|EXOC6|54536|exocyst complex component 6##AF220217|EXOC6|54536|exocyst complex component 6##AL832501|EXOC6|54536|exocyst complex component 6##EF571007|EXOC6|54536|exocyst complex component 6##AK315544|EXOC6|54536|exocyst complex component 6##BC028395|EXOC6|54536|exocyst complex component 6##EU832839|EXOC6|54536|exocyst complex component 6##GQ129240|EXOC6|54536|exocyst complex component 6##NM_001013848|EXOC6|54536|exocyst complex component 6##NM_002729|HHEX|3087|hematopoietically expressed homeobox##AK314891|HHEX|3087|hematopoietically expressed homeobox##BC014336|HHEX|3087|hematopoietically expressed homeobox##BC015110|HHEX|3087|hematopoietically expressed homeobox##L16499|HHEX|3087|hematopoietically expressed homeobox##X67235|HHEX|3087|hematopoietically expressed homeobox##BC050638|HHEX|3087|hematopoietically expressed homeobox##EU446478|HHEX|3087|hematopoietically expressed homeobox##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1	0.990884	CTCF.p2:7:0.991
chr2	27526445	27526539	reg1019284.p2	7.487	+	AK300699 NM_032546 NM_187841 AK311516	-21194	+	AK097736 NM_173650 AK311597 BC035194 AK302239	-28178	+	CU688460 DQ892115 DQ895310 U76010 TSC_hg19_v1_chr2_-_27485916 AK313600 BC028358 NM_003459	-40606	-	BC104470 BC104471 NM_003353	4629	-	TSC_hg19_v1_chr2_-_27545948 AF088036 AK311549 X76538 NM_002437	19450	-	TSC_hg19_v1_chr2_-_27579344 BX647092	52839	-	AK300699|TRIM54|57159|tripartite motif containing 54##NM_032546|TRIM54|57159|tripartite motif containing 54##NM_187841|TRIM54|57159|tripartite motif containing 54##AK097736|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##NM_173650|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##BC035194|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##AK302239|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##DQ892115|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##DQ895310|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##U76010|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##AK313600|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##BC028358|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##NM_003459|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##BC104470|UCN|7349|urocortin##BC104471|UCN|7349|urocortin##NM_003353|UCN|7349|urocortin##AF088036|MPV17|4358|MpV17 mitochondrial inner membrane protein##X76538|MPV17|4358|MpV17 mitochondrial inner membrane protein##NM_002437|MPV17|4358|MpV17 mitochondrial inner membrane protein##BX647092|GTF3C2|2976|general transcription factor IIIC, polypeptide 2, beta 110kDa	0.01358	
chr6	137248597	137248711	reg1017822.p2	7.487	+	AK316095 BC087842 NM_001008783 AK295424	-5201	+	TSC_hg19_v1_chr6_+_137143749 U76560 BC006268 AB529018 CR542054 CR542076 CU675317 CU689196	-104879	+	TSC_hg19_v1_chr6_+_137143699 NM_000288 BC031606 U88871	-104952	+	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	117184	-	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	117591	-	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	246097	-	AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##U76560|PEX7|5191|peroxisomal biogenesis factor 7##BC006268|PEX7|5191|peroxisomal biogenesis factor 7##CR542054|PEX7|5191|peroxisomal biogenesis factor 7##CR542076|PEX7|5191|peroxisomal biogenesis factor 7##NM_000288|PEX7|5191|peroxisomal biogenesis factor 7##BC031606|PEX7|5191|peroxisomal biogenesis factor 7##U88871|PEX7|5191|peroxisomal biogenesis factor 7##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2	0.122702	
chr8	99717885	99718039	reg1020085.p1	7.487	+	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	-278616	+	BC132687 BC144055 TSC_hg19_v1_chr8_-_99306600 AK024017 NM_024759	-411363	-	BC011529 NM_015029	-587895	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	119885	-	NM_001142462 NM_053001 TSC_hg19_v1_chr8_+_99956669 AK074518 AK291491 AK310994 BC016936 AY038073	238695	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	307533	+	BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC132687|NIPAL2|79815|NIPA-like domain containing 2##BC144055|NIPAL2|79815|NIPA-like domain containing 2##AK024017|NIPAL2|79815|NIPA-like domain containing 2##NM_024759|NIPAL2|79815|NIPA-like domain containing 2##BC011529|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015029|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3##NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)##NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)##AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)##AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)##AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)##BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)##AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)	0.998111	CTCF.p2:-2:0.998
chr12	48477994	48478138	reg1019528.p1	7.486	+	NM_001844 NM_033150 TSC_hg19_v1_chr12_-_48398292	-79778	-	TSC_hg19_v1_chr12_+_48357387 AK310035 AK313698 AK299154 BC107792	-120646	+	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	-120728	+	TSC_hg19_v1_chr12_-_48499809 BC045639 BX640784 NM_014554 BX537920	21560	-	NM_001166686 AK126229	21614	+	TSC_hg19_v1_chr12_-_48499846 AK292060 AK312874	21899	-	NM_001844|COL2A1|1280|collagen, type II, alpha 1##NM_033150|COL2A1|1280|collagen, type II, alpha 1##AK310035|TMEM106C|79022|transmembrane protein 106C##AK313698|TMEM106C|79022|transmembrane protein 106C##AK299154|TMEM106C|79022|transmembrane protein 106C##BC107792|TMEM106C|79022|transmembrane protein 106C##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C##BC045639|SENP1|29843|SUMO1/sentrin specific peptidase 1##BX640784|SENP1|29843|SUMO1/sentrin specific peptidase 1##NM_014554|SENP1|29843|SUMO1/sentrin specific peptidase 1##BX537920|SENP1|29843|SUMO1/sentrin specific peptidase 1##NM_001166686|PFKM|5213|phosphofructokinase, muscle##AK126229|PFKM|5213|phosphofructokinase, muscle##AK292060|SENP1|29843|SUMO1/sentrin specific peptidase 1##AK312874|SENP1|29843|SUMO1/sentrin specific peptidase 1	0.220105	CTCF.p2:-23:0.220
chr2	170308690	170308852	reg1019564.p2	7.486	+	U33837 TSC_hg19_v1_chr2_-_170219045 AK295005 NM_004525	-89692	-	AY265358 AY265357 TSC_hg19_v1_chr2_-_170218991	-89790	-	AY359046 NM_001142271	-371155	+	TSC_hg19_v1_chr2_+_170335996 AK302851 AY604003 AY604004 NM_152384 BC044593 AL834305 AK312680 AM393220 AB528077 CU692220	27234	+	AF333387 NM_006063 TSC_hg19_v1_chr2_+_170366211 AK316571 BC006534 AF056929 DQ896002 EU176397	57478	+	AL832058 AK074302 BC017950 AK055892 AK130797 BC035241 NM_024622	121596	-	U33837|LRP2|4036|low density lipoprotein receptor-related protein 2##AK295005|LRP2|4036|low density lipoprotein receptor-related protein 2##NM_004525|LRP2|4036|low density lipoprotein receptor-related protein 2##AY265358|LRP2|4036|low density lipoprotein receptor-related protein 2##AY265357|LRP2|4036|low density lipoprotein receptor-related protein 2##AY359046|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##NM_001142271|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AY604003|BBS5|129880|Bardet-Biedl syndrome 5##AY604004|BBS5|129880|Bardet-Biedl syndrome 5##NM_152384|BBS5|129880|Bardet-Biedl syndrome 5##BC044593|BBS5|129880|Bardet-Biedl syndrome 5##AL834305|BBS5|129880|Bardet-Biedl syndrome 5##AK312680|BBS5|129880|Bardet-Biedl syndrome 5##AM393220|BBS5|129880|Bardet-Biedl syndrome 5##AF333387|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##NM_006063|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##AK316571|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##BC006534|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##AF056929|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##DQ896002|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##EU176397|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##AL832058|FASTKD1|79675|FAST kinase domains 1##AK074302|FASTKD1|79675|FAST kinase domains 1##BC017950|FASTKD1|79675|FAST kinase domains 1##AK055892|FASTKD1|79675|FAST kinase domains 1##AK130797|FASTKD1|79675|FAST kinase domains 1##BC035241|FASTKD1|79675|FAST kinase domains 1##NM_024622|FASTKD1|79675|FAST kinase domains 1	0.579413	CTCF.p2:9:0.579
chr6	12911715	12911861	reg1021394.p1	7.486	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-194745	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-194845	+	TSC_hg19_v1_chr6_+_12514301 D28417	-397486	+	AK091836 AX747210 NM_001242698	384029	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	416912	-	AK027010 NM_001242630	496580	-	AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.120606	
chr10	115214389	115214501	reg1018929.p2	7.484	+	TSC_hg19_v1_chr10_+_114710785 FJ010164 FJ010165 FJ010173	-503612	+	TSC_hg19_v1_chr10_+_114710005 AK225809 NM_001146274 NM_001146283 NM_001146284 NM_001146285 NM_001146286 NM_001198525 NM_001198526 NM_001198527 NM_001198528 NM_001198529 NM_001198530 NM_001198531 NM_030756 FJ010174 Y11306 AK315243 FJ010168 FJ010169 FJ010172 FJ010166 FJ010167 FJ010170 BC032656 FJ010171 AK299295 AB440195 AB451266 CR536574 HM352838 HM352839 HM352840 HM352841 HM352842 HM352843 HM352844 HM352845 HM352846 HM352847 HM352848 HM352849 HM352850 HM352851 BX648364	-504143	+	TSC_hg19_v1_chr10_-_114207307 AK308026	-1007140	-	AK303948 NM_001177660	96144	+	NM_004132 D49742 S83182 BC031412 AK290832 AK303761 AK303759 AB590433 CU689160 DQ890820 DQ893975	98383	+	AM392642 AM393530 BC126407 BC143751 AL831980 AL832025 AL832330 BX640682 AY177620 AY177621 BX641052 BC005933 BC017866 BC058825 BC070130 AK056969 AY081943 NM_006175 NM_198060	209277	-	FJ010164|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010165|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010173|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK308026|ZDHHC6|64429|zinc finger, DHHC-type containing 6##AK303948|HABP2|3026|hyaluronan binding protein 2##NM_001177660|HABP2|3026|hyaluronan binding protein 2##NM_004132|HABP2|3026|hyaluronan binding protein 2##D49742|HABP2|3026|hyaluronan binding protein 2##S83182|HABP2|3026|hyaluronan binding protein 2##BC031412|HABP2|3026|hyaluronan binding protein 2##AK290832|HABP2|3026|hyaluronan binding protein 2##AK303761|HABP2|3026|hyaluronan binding protein 2##AK303759|HABP2|3026|hyaluronan binding protein 2##DQ890820|HABP2|3026|hyaluronan binding protein 2##DQ893975|HABP2|3026|hyaluronan binding protein 2##AM392642|NRAP|4892|nebulin-related anchoring protein##AM393530|NRAP|4892|nebulin-related anchoring protein##BC126407|NRAP|4892|nebulin-related anchoring protein##BC143751|NRAP|4892|nebulin-related anchoring protein##AL831980|NRAP|4892|nebulin-related anchoring protein##AL832025|NRAP|4892|nebulin-related anchoring protein##AL832330|NRAP|4892|nebulin-related anchoring protein##BX640682|NRAP|4892|nebulin-related anchoring protein##AY177620|NRAP|4892|nebulin-related anchoring protein##AY177621|NRAP|4892|nebulin-related anchoring protein##BX641052|NRAP|4892|nebulin-related anchoring protein##BC005933|NRAP|4892|nebulin-related anchoring protein##BC017866|NRAP|4892|nebulin-related anchoring protein##BC058825|NRAP|4892|nebulin-related anchoring protein##BC070130|NRAP|4892|nebulin-related anchoring protein##AK056969|NRAP|4892|nebulin-related anchoring protein##AY081943|NRAP|4892|nebulin-related anchoring protein##NM_006175|NRAP|4892|nebulin-related anchoring protein##NM_198060|NRAP|4892|nebulin-related anchoring protein	0.997643	CTCF.p2:4:0.998
chr1	1624734	1624833	reg1017333.p3	7.484	+	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	-566	-	BC092507 TSC_hg19_v1_chr1_-_1624149 AK125619	-625	-	TSC_hg19_v1_chr1_-_1623947 CR936618 BC062371	-818	-	TSC_hg19_v1_chr1_-_1655767 AK303446 AF067518 AF067519 AF067520 AF067521 AF067522 AF067523 AK301495 AK304679 BC009375 AF067512 AF067513 AF067514 AF067515 AF067516 AF067517 AK303451 NM_033486 NM_033487 NM_033488 NM_033489 NM_033492 NM_033493 U04816 U04817 U04818 U04824 U07704 U07705 NM_024011 NM_033529	30993	-	AL049665 NM_001199787 NM_182838 TSC_hg19_v1_chr1_-_1677454 BC110653	52678	-	AK296722 NM_001198995	65297	-	AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B##BC092507|SLC35E2B|728661|solute carrier family 35, member E2B##AK125619|SLC35E2B|728661|solute carrier family 35, member E2B##CR936618|SLC35E2B|728661|solute carrier family 35, member E2B##BC062371|SLC35E2|9906|solute carrier family 35, member E2##AK303446|CDK11B|984|cyclin-dependent kinase 11B##AF067518|CDK11A|728642|cyclin-dependent kinase 11A##AF067519|CDK11A|728642|cyclin-dependent kinase 11A##AF067520|CDK11A|728642|cyclin-dependent kinase 11A##AF067521|CDK11A|728642|cyclin-dependent kinase 11A##AF067522|CDK11A|728642|cyclin-dependent kinase 11A##AF067523|CDK11A|728642|cyclin-dependent kinase 11A##AK301495|CDK11B|984|cyclin-dependent kinase 11B##AK304679|CDK11B|984|cyclin-dependent kinase 11B##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AF067512|CDK11B|984|cyclin-dependent kinase 11B##AF067513|CDK11B|984|cyclin-dependent kinase 11B##AF067514|CDK11B|984|cyclin-dependent kinase 11B##AF067515|CDK11B|984|cyclin-dependent kinase 11B##AF067516|CDK11B|984|cyclin-dependent kinase 11B##AF067517|CDK11B|984|cyclin-dependent kinase 11B##AK303451|CDK11B|984|cyclin-dependent kinase 11B##NM_033486|CDK11B|984|cyclin-dependent kinase 11B##NM_033487|CDK11B|984|cyclin-dependent kinase 11B##NM_033488|CDK11B|984|cyclin-dependent kinase 11B##NM_033489|CDK11B|984|cyclin-dependent kinase 11B##NM_033492|CDK11B|984|cyclin-dependent kinase 11B##NM_033493|CDK11B|984|cyclin-dependent kinase 11B##U04816|CDK11B|984|cyclin-dependent kinase 11B##U04817|CDK11B|984|cyclin-dependent kinase 11B##U04818|CDK11B|984|cyclin-dependent kinase 11B##U04824|CDK11B|984|cyclin-dependent kinase 11B##U07704|CDK11A|728642|cyclin-dependent kinase 11A##U07705|CDK11A|728642|cyclin-dependent kinase 11A##NM_024011|CDK11A|728642|cyclin-dependent kinase 11A##NM_033529|CDK11A|728642|cyclin-dependent kinase 11A##AL049665|SLC35E2|9906|solute carrier family 35, member E2##NM_001199787|SLC35E2|9906|solute carrier family 35, member E2##NM_182838|SLC35E2|9906|solute carrier family 35, member E2##BC110653|SLC35E2B|728661|solute carrier family 35, member E2B##AK296722|NADK|65220|NAD kinase##NM_001198995|NADK|65220|NAD kinase	0.102769	
chr22	19465207	19465388	reg1017472.p2	7.484	+	AK290073 NM_001166242 NM_173793	-29557	-	BC030758 CU013050 CU013338 TSC_hg19_v1_chr22_-_19435224 AK299950 AK095271 AK308642 CR456339 BC046204 BC062599 AK289809	-30069	-	TSC_hg19_v1_chr22_+_19420067 BC009707 NM_003776 AF034091 AJ295637 CR456532 AB528186 CU013132 CU013420 AK057708	-45250	+	CR456607 TSC_hg19_v1_chr22_-_19466707 AY101594 U64444 BC001049 BC005087 AK315998 AK225877 BX648483 AK304734 AK308786	1368	-	TSC_hg19_v1_chr22_-_19466712 AK310950	1416	-	TSC_hg19_v1_chr22_-_19466726 NM_001035247 NM_005659	1439	-	AK290073|C22orf39|128977|chromosome 22 open reading frame 39##NM_001166242|C22orf39|128977|chromosome 22 open reading frame 39##NM_173793|C22orf39|128977|chromosome 22 open reading frame 39##BC030758|C22orf39|128977|chromosome 22 open reading frame 39##AK299950|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##AK095271|C22orf39|128977|chromosome 22 open reading frame 39##AK308642|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##CR456339|C22orf39|128977|chromosome 22 open reading frame 39##BC046204|C22orf39|128977|chromosome 22 open reading frame 39##BC062599|C22orf39|128977|chromosome 22 open reading frame 39##AK289809|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##BC009707|MRPL40|64976|mitochondrial ribosomal protein L40##NM_003776|MRPL40|64976|mitochondrial ribosomal protein L40##AF034091|MRPL40|64976|mitochondrial ribosomal protein L40##AJ295637|MRPL40|64976|mitochondrial ribosomal protein L40##CR456532|MRPL40|64976|mitochondrial ribosomal protein L40##CU013132|MRPL40|64976|mitochondrial ribosomal protein L40##CU013420|MRPL40|64976|mitochondrial ribosomal protein L40##AK057708|MRPL40|64976|mitochondrial ribosomal protein L40##CR456607|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##AY101594|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##U64444|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##BC001049|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##BC005087|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##AK315998|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##AK225877|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##BX648483|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##AK304734|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##AK308786|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##AK310950|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##NM_001035247|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##NM_005659|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)	0.827647	CTCF.p2:-7:0.828
chr8	107205495	107205605	reg1018386.p2	7.484	+	AF119334 BC109222 BC109223 NM_012082	-874404	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-1604303	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-1604375	-	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	76873	+	AK296561 NM_001198532	254601	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	464438	+	AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1	0.482866	CTCF.p2:6:0.483
chr17	77782592	77782720	reg1019957.p1	7.483	+	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-11749	-	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	-30675	+	AY230663 BC041453 NM_178543 AY358622	-77767	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	30486	-	BC044939 TSC_hg19_v1_chr17_+_77893233	110543	+	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	226946	-	EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16	0.0	
chr20	61505129	61505234	reg1018391.p1	7.483	+	AF070992 AB012124 BC065520 BC046933 NM_006602 TSC_hg19_v1_chr20_-_61493138	-12125	-	NM_080750	-28706	+	TSC_hg19_v1_chr20_+_61448401 BC011705 NM_001853 DQ892946 DQ896194 L41162	-56778	+	TSC_hg19_v1_chr20_-_61557824 BC014615 BC014489	52640	-	TSC_hg19_v1_chr20_-_61557842 AY481571 AY481572	52675	-	TSC_hg19_v1_chr20_-_61557874 NM_001193369 NM_001193370 NM_080796	52707	-	AF070992|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##AB012124|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC065520|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC046933|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##NM_006602|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##NM_080750|DPH3P1|100132911|DPH3, KTI11 homolog (S. cerevisiae) pseudogene 1##BC011705|COL9A3|1299|collagen, type IX, alpha 3##NM_001853|COL9A3|1299|collagen, type IX, alpha 3##DQ892946|COL9A3|1299|collagen, type IX, alpha 3##DQ896194|COL9A3|1299|collagen, type IX, alpha 3##L41162|COL9A3|1299|collagen, type IX, alpha 3##BC014615|DIDO1|11083|death inducer-obliterator 1##BC014489|DIDO1|11083|death inducer-obliterator 1##AY481571|DIDO1|11083|death inducer-obliterator 1##AY481572|DIDO1|11083|death inducer-obliterator 1##NM_001193369|DIDO1|11083|death inducer-obliterator 1##NM_001193370|DIDO1|11083|death inducer-obliterator 1##NM_080796|DIDO1|11083|death inducer-obliterator 1	0.830069	CTCF.p2:10:0.830
chr7	150725804	150725937	reg1018018.p1	7.483	+	TSC_hg19_v1_chr7_+_150725538 AK128129 NM_007188 AK094636 AK002018 AK094005 AK222911 AK294344 AK310796 AK314721 BC141814 BC141836 BC151235 AF047690 BC130036 AK024401 BC143080 BC146829	-307	+	BC128587 AK096734 AY515311 NM_173681	-4302	-	AK292928 AK302686 M93718 AK315213 TSC_hg19_v1_chr7_+_150690869 AK223636 AK225827 M95296 BC069465 HQ257992 AF400594 DQ256129 DQ256130 DQ256131 NM_001160109 NM_001160110 NM_001160111	-35006	+	BC030282 NM_004769 NM_020321 NM_020322	19734	+	AY049778 BT006680 CR457041 CU674995 DQ411039 AB463550 L04658 TSC_hg19_v1_chr7_-_150754948 BC005115 X66364 AK026533	29086	-	TSC_hg19_v1_chr7_-_150754982 NM_001164410 NM_004935	29145	-	NM_007188|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK094636|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK002018|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK094005|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK222911|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK294344|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK310796|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK314721|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC141814|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC141836|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC151235|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AF047690|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK024401|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC143080|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC146829|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##HQ257992|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC030282|ACCN3|9311|amiloride-sensitive cation channel 3##NM_004769|ACCN3|9311|amiloride-sensitive cation channel 3##NM_020321|ACCN3|9311|amiloride-sensitive cation channel 3##NM_020322|ACCN3|9311|amiloride-sensitive cation channel 3##AY049778|CDK5|1020|cyclin-dependent kinase 5##BT006680|CDK5|1020|cyclin-dependent kinase 5##CR457041|CDK5|1020|cyclin-dependent kinase 5##DQ411039|CDK5|1020|cyclin-dependent kinase 5##L04658|CDK5|1020|cyclin-dependent kinase 5##BC005115|CDK5|1020|cyclin-dependent kinase 5##X66364|CDK5|1020|cyclin-dependent kinase 5##AK026533|CDK5|1020|cyclin-dependent kinase 5##NM_001164410|CDK5|1020|cyclin-dependent kinase 5##NM_004935|CDK5|1020|cyclin-dependent kinase 5	0.07154	
chr15	44231396	44231541	reg1022472.p1	7.482	+	NM_001167941 NM_024908 TSC_hg19_v1_chr15_+_44119199 AK290933 BC025247 AK023035 BC051855 EF011624 CU690868	-112281	+	AB463886 CU690792 DQ893389 DQ896709 TSC_hg19_v1_chr15_-_44116882 U04209 BC023557 BC050742 AK312867 NM_005926	-114610	-	TSC_hg19_v1_chr15_+_44092806 AK022435 AF161485 AF049613	-138666	+	BC043486 CU691018 BC007796 BC053647 NM_032892 TSC_hg19_v1_chr15_-_44487448	255882	-	AK090572 AX746516 TSC_hg19_v1_chr15_-_44487470	256001	-	TSC_hg19_v1_chr15_+_44580919 NM_138423 NM_177974 BC012124	349431	+	NM_001167941|WDR76|79968|WD repeat domain 76##NM_024908|WDR76|79968|WD repeat domain 76##AK290933|WDR76|79968|WD repeat domain 76##BC025247|WDR76|79968|WD repeat domain 76##AK023035|WDR76|79968|WD repeat domain 76##BC051855|WDR76|79968|WD repeat domain 76##EF011624|WDR76|79968|WD repeat domain 76##DQ893389|MFAP1|4236|microfibrillar-associated protein 1##DQ896709|MFAP1|4236|microfibrillar-associated protein 1##U04209|MFAP1|4236|microfibrillar-associated protein 1##BC023557|MFAP1|4236|microfibrillar-associated protein 1##BC050742|MFAP1|4236|microfibrillar-associated protein 1##AK312867|MFAP1|4236|microfibrillar-associated protein 1##NM_005926|MFAP1|4236|microfibrillar-associated protein 1##AK022435|C15orf63|25764|chromosome 15 open reading frame 63##AF161485|C15orf63|25764|chromosome 15 open reading frame 63##AF049613|C15orf63|25764|chromosome 15 open reading frame 63##BC043486|FRMD5|84978|FERM domain containing 5##BC007796|FRMD5|84978|FERM domain containing 5##BC053647|FRMD5|84978|FERM domain containing 5##NM_032892|FRMD5|84978|FERM domain containing 5##AK090572|FRMD5|84978|FERM domain containing 5##NM_138423|CASC4|113201|cancer susceptibility candidate 4##NM_177974|CASC4|113201|cancer susceptibility candidate 4##BC012124|CASC4|113201|cancer susceptibility candidate 4	0.079333	
chr17	54556345	54556447	reg1014827.p2	7.482	+	NM_153228 AK095654	-325560	+	TSC_hg19_v1_chr17_+_53828441 AF114430 NM_001102402 AK058120 BC005112	-727796	+	AK024667 AK314509 TSC_hg19_v1_chr17_+_53828413 BC012084	-727975	+	AK314080 NM_005450 TSC_hg19_v1_chr17_+_54671080	114673	+	BC093905 BC093907 NM_001085430	336853	-	BC041467 TSC_hg19_v1_chr17_-_54911271	354877	-	NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AF114430|PCTP|58488|phosphatidylcholine transfer protein##NM_001102402|PCTP|58488|phosphatidylcholine transfer protein##AK058120|PCTP|58488|phosphatidylcholine transfer protein##BC005112|PCTP|58488|phosphatidylcholine transfer protein##AK024667|PCTP|58488|phosphatidylcholine transfer protein##AK314509|PCTP|58488|phosphatidylcholine transfer protein##BC012084|PCTP|58488|phosphatidylcholine transfer protein##AK314080|NOG|9241|noggin##NM_005450|NOG|9241|noggin##BC093905|C17orf67|339210|chromosome 17 open reading frame 67##BC093907|C17orf67|339210|chromosome 17 open reading frame 67##NM_001085430|C17orf67|339210|chromosome 17 open reading frame 67##BC041467|C17orf67|339210|chromosome 17 open reading frame 67	0.999365	CTCF.p2:0:0.999
chr2	92229710	92229857	reg1020201.p1	7.482	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-381780	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-2018065	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-2152029	+	AK097438 BC021716 NM_144705 AK296678 CU692394	3307467	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	3461699	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	3557759	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.843859	CTCF.p2:35:0.829
chr6_ssto_hap7	2701257	2701370	reg1019275.p1	7.482	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr2	111966828	111967009	reg1017157.p2	7.481	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-88431	+	AK300513 NM_001142807 BC022268	-476739	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-531096	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	674708	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	674843	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	689267	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.0	
chr7	78140025	78140147	reg1020571.p1	7.481	+	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-670577	+	BC067742 TSC_hg19_v1_chr7_+_77428204 AL136883	-711876	+	TSC_hg19_v1_chr7_+_77428194 NM_001127358 NM_001127360 AK225854 AK090643 AX746556 AK308289	-711945	+	AB014605 BC150277 AK297353 AF038563 NM_012301	942793	-	TSC_hg19_v1_chr7_+_79083303 AK311103	943071	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	1624053	+	BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##BC067742|PHTF2|57157|putative homeodomain transcription factor 2##AL136883|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2##AK225854|PHTF2|57157|putative homeodomain transcription factor 2##AK090643|PHTF2|57157|putative homeodomain transcription factor 2##AK308289|PHTF2|57157|putative homeodomain transcription factor 2##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1	0.054244	
chr8	125966081	125966188	reg1017858.p1	7.481	+	TSC_hg19_v1_chr8_-_125740689 AF086645 NM_014751	-225411	-	EF560715 TSC_hg19_v1_chr8_-_125740463 AK027015	-225689	-	TSC_hg19_v1_chr8_-_125716430 U50573	-249702	-	NM_152412 BX537876 AK095321 BC130515 BC130517	19414	+	NM_003129 TSC_hg19_v1_chr8_+_126010746 AK301792 BX647605	44599	+	TSC_hg19_v1_chr8_+_126010748 BX647400	44642	+	AF086645|MTSS1|9788|metastasis suppressor 1##NM_014751|MTSS1|9788|metastasis suppressor 1##EF560715|MTSS1|9788|metastasis suppressor 1##AK027015|MTSS1|9788|metastasis suppressor 1##U50573|MTSS1|9788|metastasis suppressor 1##NM_152412|ZNF572|137209|zinc finger protein 572##BX537876|ZNF572|137209|zinc finger protein 572##AK095321|ZNF572|137209|zinc finger protein 572##BC130515|ZNF572|137209|zinc finger protein 572##BC130517|ZNF572|137209|zinc finger protein 572##NM_003129|SQLE|6713|squalene epoxidase##AK301792|SQLE|6713|squalene epoxidase##BX647605|SQLE|6713|squalene epoxidase##BX647400|SQLE|6713|squalene epoxidase	0.946614	CTCF.p2:-2:0.947
chr12	17795101	17795193	reg1018333.p1	7.480	+	AF258348 BC017777 AB044746 AK095595 AK308826 NM_001001395 NM_001243609	-1034106	-	AK308594 AK294909 NM_001243613	-1035136	-	BC050085 NM_001243610	-1035414	-	AK026308 BC042888 NM_024730	447935	-	NM_004570	619326	+	AF532185 NM_033123 AK314516 AY035866 AK292279	1095806	-	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC050085|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243610|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK026308|RERGL|79785|RERG/RAS-like##BC042888|RERGL|79785|RERG/RAS-like##NM_024730|RERGL|79785|RERG/RAS-like##NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1	0.999785	CTCF.p2:-2:1.000
chr1	54647516	54647642	reg1019058.p1	7.480	+	NM_201546	-28137	-	AK096488 AK056674 NM_153035 BC035374	-128280	+	AK075187 TSC_hg19_v1_chr1_-_54519086 AK074636 AF290615 AX775907 NM_004872	-128492	-	TSC_hg19_v1_chr1_-_54665704 BC012781 BC038388 AK090456 BC071735 BC064419 AK122760 NM_001031672	18128	-	AK024572 NM_016491 TSC_hg19_v1_chr1_+_54665839	18263	+	TSC_hg19_v1_chr1_+_54665855 AK026171	18274	+	NM_201546|CDCP2|200008|CUB domain containing protein 2##AK096488|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##AK056674|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##NM_153035|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##BC035374|TCEANC2|127428|transcription elongation factor A (SII) N-terminal and central domain containing 2##AK075187|TMEM59|9528|transmembrane protein 59##AF290615|TMEM59|9528|transmembrane protein 59##AX775907|TMEM59|9528|transmembrane protein 59##NM_004872|TMEM59|9528|transmembrane protein 59##BC012781|CYB5RL|606495|cytochrome b5 reductase-like##BC038388|CYB5RL|606495|cytochrome b5 reductase-like##AK090456|CYB5RL|606495|cytochrome b5 reductase-like##BC071735|CYB5RL|606495|cytochrome b5 reductase-like##BC064419|CYB5RL|606495|cytochrome b5 reductase-like##NM_001031672|CYB5RL|606495|cytochrome b5 reductase-like##AK024572|MRPL37|51253|mitochondrial ribosomal protein L37##NM_016491|MRPL37|51253|mitochondrial ribosomal protein L37##AK026171|MRPL37|51253|mitochondrial ribosomal protein L37	0.863518	CTCF.p2:-24:0.864
chr20	23763147	23763285	reg1019280.p2	7.480	+	J03870 BC021225 NM_001898	-31651	-	CU688086 BC074952 BC074953 NM_001899 X54667 BC065714	-93575	-	BX647523 BT006839 CR541988 CR542018 AB590227 DQ891439 EU176584 AB587083 TSC_hg19_v1_chr20_-_23618593 BC013083 NM_000099 X05607 BC110305 AK312213	-144717	-	CU687582 NM_001322 BC062679	44116	-	AB590893 CU686872 HQ447459 BC069514 X70377 BC062678 NM_001900	97130	-	L20492 L20491 NM_178312	204255	-	J03870|CST1|1469|cystatin SN##BC021225|CST1|1469|cystatin SN##NM_001898|CST1|1469|cystatin SN##BC074952|CST4|1472|cystatin S##BC074953|CST4|1472|cystatin S##NM_001899|CST4|1472|cystatin S##X54667|CST4|1472|cystatin S##BC065714|CST4|1472|cystatin S##BX647523|CST3|1471|cystatin C##BT006839|CST3|1471|cystatin C##CR541988|CST3|1471|cystatin C##CR542018|CST3|1471|cystatin C##DQ891439|CST3|1471|cystatin C##EU176584|CST3|1471|cystatin C##AB587083|CST3|1471|cystatin C##BC013083|CST3|1471|cystatin C##NM_000099|CST3|1471|cystatin C##X05607|CST3|1471|cystatin C##BC110305|CST3|1471|cystatin C##AK312213|CST3|1471|cystatin C##NM_001322|CST2|1470|cystatin SA##BC062679|CST2|1470|cystatin SA##HQ447459|CST5|1473|cystatin D##BC069514|CST5|1473|cystatin D##X70377|CST5|1473|cystatin D##BC062678|CST5|1473|cystatin D##NM_001900|CST5|1473|cystatin D##L20492|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20491|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178312|GGTLC1|92086|gamma-glutamyltransferase light chain 1	0.999062	CTCF.p2:-14:0.999
chr3	167758532	167758651	reg1021217.p1	7.479	+	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-305102	+	BC002506 NM_007217 AF022385 NM_145860 TSC_hg19_v1_chr3_-_167452681 BC016353 NM_145859 AK291130	-305940	-	TSC_hg19_v1_chr3_-_167371732 AK097556	-386868	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	54524	-	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	54840	-	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	1105488	-	NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC002506|PDCD10|11235|programmed cell death 10##NM_007217|PDCD10|11235|programmed cell death 10##AF022385|PDCD10|11235|programmed cell death 10##NM_145860|PDCD10|11235|programmed cell death 10##BC016353|PDCD10|11235|programmed cell death 10##NM_145859|PDCD10|11235|programmed cell death 10##AK291130|PDCD10|11235|programmed cell death 10##AK097556|WDR49|151790|WD repeat domain 49##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus	0.44387	CTCF.p2:4:0.444
chr6	148487616	148487736	reg1018154.p1	7.479	+	TSC_hg19_v1_chr6_+_147829825 NM_001030060	-657857	+	TSC_hg19_v1_chr6_+_147527118 AK128121	-960566	+	NM_001127715 NM_139244 AL834152 BC107737 BC113382 BC113408	-962120	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	176087	+	TSC_hg19_v1_chr6_+_148663973 AB018333	176314	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	176515	+	NM_001030060|SAMD5|389432|sterile alpha motif domain containing 5##AK128121|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001127715|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_139244|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AL834152|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC107737|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113382|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113408|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1	0.999249	CTCF.p2:12:0.999
chr10	103051495	103051614	reg1016586.p1	7.478	+	BC136321 BC069156 NM_006562 X90828	-62852	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-160376	+	BC019674 NM_001085398	-160652	-	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	62318	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	296375	-	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	296455	-	BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda	0.988446	CTCF.p2:0:0.988
chr11	61299738	61299861	reg1019474.p1	7.478	+	NM_001145077	-23528	+	NM_001170753 NM_145017 TSC_hg19_v1_chr11_+_61248591 AK057333 BC043246 JF442033	-51181	+	TSC_hg19_v1_chr11_+_61197595 BX648946 AK000494 NM_017841 BC002331	-102205	+	TSC_hg19_v1_chr11_-_61348549 BC125170 BC125171 NM_001252065 NM_004200	48728	-	TSC_hg19_v1_chr11_+_61447896 BC150176 BC150195 NM_006133 AB014559 BC152453	148082	+	TSC_hg19_v1_chr11_+_61520107 AB023171 NM_001127392 AB385408	220308	+	NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B##NM_001170753|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##NM_145017|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##AK057333|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##BC043246|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##JF442033|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##AK000494|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##NM_017841|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##BC002331|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##BC125170|SYT7|9066|synaptotagmin VII##BC125171|SYT7|9066|synaptotagmin VII##NM_001252065|SYT7|9066|synaptotagmin VII##NM_004200|SYT7|9066|synaptotagmin VII##BC150176|DAGLA|747|diacylglycerol lipase, alpha##BC150195|DAGLA|747|diacylglycerol lipase, alpha##NM_006133|DAGLA|747|diacylglycerol lipase, alpha##AB014559|DAGLA|747|diacylglycerol lipase, alpha##BC152453|DAGLA|747|diacylglycerol lipase, alpha##AB023171|C11orf9|745|chromosome 11 open reading frame 9##NM_001127392|C11orf9|745|chromosome 11 open reading frame 9	0.844463	CTCF.p2:15:0.203	CTCF.p2:91:0.584
chr11	42546304	42546427	reg1021399.p1	7.477	+	AB046800 NM_020929	-2230702	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-2231771	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-5926563	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	787153	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	787199	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	787275	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.0501	
chr17	38555504	38555654	reg1017728.p2	7.477	+	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	-34633	-	NM_001024809	-57309	+	TSC_hg19_v1_chr17_+_38474548 AK130192	-81032	+	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	18545	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	44240	+	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	102267	-	AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_001024809|RARA|5914|retinoic acid receptor, alpha##AK130192|RARA|5914|retinoic acid receptor, alpha##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4	0.999128	CTCF.p2:-13:0.999
chr2	133408794	133408921	reg1021245.p1	7.477	+	AK122643 NM_001508	-234711	+	BC043584 NM_214461	-849624	-	AF038169 NM_013310	-928794	+	AY358628 BC017318 AK309849 AK075487 TSC_hg19_v1_chr2_-_133427783 AK130005 AK094501 AK123029	18846	-	NM_144586	19623	-	NM_001077427 AK309668	20253	-	AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##AY358628|LYPD1|116372|LY6/PLAUR domain containing 1##BC017318|LYPD1|116372|LY6/PLAUR domain containing 1##AK309849|LYPD1|116372|LY6/PLAUR domain containing 1##AK075487|LYPD1|116372|LY6/PLAUR domain containing 1##AK130005|LYPD1|116372|LY6/PLAUR domain containing 1##AK094501|LYPD1|116372|LY6/PLAUR domain containing 1##AK123029|LYPD1|116372|LY6/PLAUR domain containing 1##NM_144586|LYPD1|116372|LY6/PLAUR domain containing 1##NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1##AK309668|LYPD1|116372|LY6/PLAUR domain containing 1	0.99442	CTCF.p2:8:0.994
chr5	53739209	53739361	reg1018007.p2	7.477	+	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	-132883	-	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	-132960	-	TSC_hg19_v1_chr5_+_52856474 AF020351 AK307973 CU675075	-882799	+	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	12239	+	TSC_hg19_v1_chr5_+_53813588 AK304195 NM_001145427 BC060791 BC067860 NM_001102575 NM_052870	74260	+	TSC_hg19_v1_chr5_+_53813656 BC117218 BC117220	74388	+	AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AF020351|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK307973|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3##AK304195|SNX18|112574|sorting nexin 18##NM_001145427|SNX18|112574|sorting nexin 18##BC060791|SNX18|112574|sorting nexin 18##BC067860|SNX18|112574|sorting nexin 18##NM_001102575|SNX18|112574|sorting nexin 18##NM_052870|SNX18|112574|sorting nexin 18##BC117218|SNX18|112574|sorting nexin 18##BC117220|SNX18|112574|sorting nexin 18	0.988248	CTCF.p2:-4:0.988
chr11	89938144	89938281	reg1021419.p1	7.476	+	NM_005467 BC038840 AK075390 TSC_hg19_v1_chr11_+_89867862 BC027594 BC088727 AJ012370 BC067793 BC096316 BC096317 BC096318 BC099646 CU691606	-70341	+	NM_001143975	-119095	+	NM_001195234	-173939	+	CU687242 BC002339 BC072461 TSC_hg19_v1_chr11_-_89956218 AF192466 AK226099 AK225565 AK312663 AF123249 AK225365	17990	-	AK290231 NM_001144073 NM_012124	18319	-	TSC_hg19_v1_chr11_+_89984372 EU302123	46198	+	NM_005467|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC038840|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##AK075390|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC027594|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##AJ012370|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC067793|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC096316|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC096317|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC096318|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC099646|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##NM_001143975|UBTFL1|642623|upstream binding transcription factor, RNA polymerase I-like 1##NM_001195234|TRIM49L2|642612|tripartite motif containing 49-like 2##BC002339|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC072461|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF192466|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK226099|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225565|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK312663|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF123249|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225365|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1	0.136964	
chr15	51695589	51695707	reg1018708.p1	7.476	+	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	-61854	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	-64884	-	AY517501 NM_207381	-298176	-	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	219325	-	AF453583 NM_001165257 NM_013243 AF078851 TSC_hg19_v1_chr15_+_51973699 AY359093 AK075314 AK296466 AK290175	277983	+	AK129759 DQ892424 DQ895638 TSC_hg19_v1_chr15_-_52029856	334228	-	NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2##AF453583|SCG3|29106|secretogranin III##NM_001165257|SCG3|29106|secretogranin III##NM_013243|SCG3|29106|secretogranin III##AF078851|SCG3|29106|secretogranin III##AY359093|SCG3|29106|secretogranin III##AK075314|SCG3|29106|secretogranin III##AK296466|SCG3|29106|secretogranin III##AK290175|SCG3|29106|secretogranin III##AK129759|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ892424|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ895638|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	0.774538	CTCF.p2:15:0.775
chr14	50809597	50809730	reg1015818.p1	7.475	+	TSC_hg19_v1_chr14_+_50779043 BC011549 NM_001003803 NM_001003805 NM_015684 AF052186 U79253	-30622	+	TSC_hg19_v1_chr14_-_50778948 CU675259 AY757363 BC006117 AK309294 AK022680 AK292627 NM_024884	-30783	-	AB209277 TSC_hg19_v1_chr14_-_50698111 NM_006939	-111563	-	BC104977 NM_004196	52953	-	TSC_hg19_v1_chr14_-_50999306 BC036013 NM_006575 NM_198794 U77129	189647	-	NM_001127713	190136	+	BC011549|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_001003803|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_001003805|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_015684|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##AF052186|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##U79253|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##AY757363|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##BC006117|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AK309294|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AK022680|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AK292627|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##NM_024884|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AB209277|SOS2|6655|son of sevenless homolog 2 (Drosophila)##NM_006939|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC104977|CDKL1|8814|cyclin-dependent kinase-like 1 (CDC2-related kinase)##NM_004196|CDKL1|8814|cyclin-dependent kinase-like 1 (CDC2-related kinase)##BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##NM_001127713|ATL1|51062|atlastin GTPase 1	0.0	
chr13	24464471	24464585	reg1018934.p3	7.474	+	NM_001135816 BC142999	-936	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	-1014	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	-1512	+	NM_001007537 CU691876 BC137004 BC137006 BC144450	6630	-	BX648445 TSC_hg19_v1_chr13_+_24553892	89337	+	TSC_hg19_v1_chr13_+_24553943 BX648244 BC043582	89405	+	NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BX648244|SPATA13|221178|spermatogenesis associated 13	0.834695	CTCF.p2:-14:0.467	CTCF.p2:18:0.261
chr4	108015588	108015715	reg1019094.p1	7.474	+	NM_014421 AF177395	-58199	-	NM_001195138	-727060	-	AK074305 NM_001163436	-777824	-	BC011392 AF016496 CR457028 CU690750 BC040940 TSC_hg19_v1_chr4_-_108641372 BC050627 AF033026 AK292774 AK297981 Y10387 BC032513 AF105227 NM_005443	625713	-	AK290344 NM_001136258 AF452717	730116	+	NM_001136257 NM_152621 BC028705 AK314049 BC041369	798773	+	NM_014421|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##AF177395|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like##AK074305|TBCK|93627|TBC1 domain containing kinase##NM_001163436|TBCK|93627|TBC1 domain containing kinase##BC011392|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF016496|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##CR457028|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC040940|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC050627|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF033026|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK292774|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK297981|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##Y10387|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC032513|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF105227|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##NM_005443|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK290344|SGMS2|166929|sphingomyelin synthase 2##NM_001136258|SGMS2|166929|sphingomyelin synthase 2##AF452717|SGMS2|166929|sphingomyelin synthase 2##NM_001136257|SGMS2|166929|sphingomyelin synthase 2##NM_152621|SGMS2|166929|sphingomyelin synthase 2##BC028705|SGMS2|166929|sphingomyelin synthase 2##AK314049|SGMS2|166929|sphingomyelin synthase 2##BC041369|SGMS2|166929|sphingomyelin synthase 2	0.443847	CTCF.p2:-19:0.444
chr1	43396808	43396983	reg1018256.p1	7.473	+	TSC_hg19_v1_chr1_+_43312304 AK296201	-84590	+	AK095184 TSC_hg19_v1_chr1_+_43312290	-84606	+	TSC_hg19_v1_chr1_+_43312284 AF131739	-84622	+	AB384810 BC118590 BC121804 TSC_hg19_v1_chr1_-_43424504 K03195	27527	-	TSC_hg19_v1_chr1_-_43424540 AK292791 AK293306 AK296736 AK312403 AB208987	27677	-	TSC_hg19_v1_chr1_-_43424834 NM_006516	27945	-	AK296201|ZNF691|51058|zinc finger protein 691##AF131739|ZNF691|51058|zinc finger protein 691##BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##NM_006516|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	0.647252	CTCF.p2:-12:0.647
chr1	54181257	54181422	reg1017928.p2	7.473	+	AK302085 TSC_hg19_v1_chr1_+_53925533 BC029566	-255809	+	AK057273 NM_033067 AJ291671	-256232	+	TSC_hg19_v1_chr1_-_53793743 NM_001018054 NM_004631 NM_017522 NM_033300	-387558	-	AK090634 AX746550 NM_147193	18537	-	DQ141696 AK302910 BX648031 TSC_hg19_v1_chr1_-_54304004 AK298909 AK295000	122635	-	AK001269 AL354612 AL354613 TSC_hg19_v1_chr1_-_54304168 BC003082 NM_001168551 NM_018087	122826	-	AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1##DQ141696|TMEM48|55706|transmembrane protein 48##AK302910|TMEM48|55706|transmembrane protein 48##BX648031|TMEM48|55706|transmembrane protein 48##AK298909|TMEM48|55706|transmembrane protein 48##AK295000|TMEM48|55706|transmembrane protein 48##AK001269|TMEM48|55706|transmembrane protein 48##AL354612|TMEM48|55706|transmembrane protein 48##AL354613|TMEM48|55706|transmembrane protein 48##BC003082|TMEM48|55706|transmembrane protein 48##NM_001168551|TMEM48|55706|transmembrane protein 48##NM_018087|TMEM48|55706|transmembrane protein 48	0.999135	CTCF.p2:-4:0.999
chr10	71906375	71906497	reg1018519.p1	7.472	+	TSC_hg19_v1_chr10_-_71906446 BC030242 AK074968 BC111501 BC042629	-8	-	TSC_hg19_v1_chr10_-_71905958 BC016840	-430	-	TSC_hg19_v1_chr10_-_71892601 BC023601 AF506757 NM_001198696 NM_032797	-13794	-	TSC_hg19_v1_chr10_-_71906457 BC047424 NM_001040273 NM_173555	44	-	TSC_hg19_v1_chr10_-_71930260 AK298591 AK312469 BC003658 AF274026 AF087897 AF217959 AF261717 AY008268 AL136724 NM_001142648 NM_020150	23843	-	AF108211 AB590125 AF217186 DQ893597 AB026723 TSC_hg19_v1_chr10_-_71993148 BC107882 AF154065 BC105034 BC105036 AF092439 AF119665 BC001022 BC061581 AK058193 NM_021129	86717	-	BC030242|TYSND1|219743|trypsin domain containing 1##AK074968|TYSND1|219743|trypsin domain containing 1##BC111501|TYSND1|219743|trypsin domain containing 1##BC042629|TYSND1|219743|trypsin domain containing 1##BC016840|TYSND1|219743|trypsin domain containing 1##BC023601|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##AF506757|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##NM_001198696|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##NM_032797|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##BC047424|TYSND1|219743|trypsin domain containing 1##NM_001040273|TYSND1|219743|trypsin domain containing 1##NM_173555|TYSND1|219743|trypsin domain containing 1##AK298591|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AK312469|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##BC003658|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF274026|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF087897|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF217959|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF261717|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AY008268|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AL136724|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##NM_001142648|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##NM_020150|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF108211|PPA1|5464|pyrophosphatase (inorganic) 1##AF217186|PPA1|5464|pyrophosphatase (inorganic) 1##DQ893597|PPA1|5464|pyrophosphatase (inorganic) 1##AB026723|PPA1|5464|pyrophosphatase (inorganic) 1##BC107882|PPA1|5464|pyrophosphatase (inorganic) 1##AF154065|PPA1|5464|pyrophosphatase (inorganic) 1##BC105034|PPA1|5464|pyrophosphatase (inorganic) 1##BC105036|PPA1|5464|pyrophosphatase (inorganic) 1##AF092439|PPA1|5464|pyrophosphatase (inorganic) 1##AF119665|PPA1|5464|pyrophosphatase (inorganic) 1##BC001022|PPA1|5464|pyrophosphatase (inorganic) 1##BC061581|PPA1|5464|pyrophosphatase (inorganic) 1##AK058193|PPA1|5464|pyrophosphatase (inorganic) 1##NM_021129|PPA1|5464|pyrophosphatase (inorganic) 1	0.0	
chr6	159674008	159674103	reg1016296.p1	7.472	+	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	-83625	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-207954	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-252834	-	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	440195	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	440307	-	TSC_hg19_v1_chr6_+_160148149 AK290854 AF374416 NM_004906 NM_152858 BC000383 BC004432 BC069192	474117	+	DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial##AK290854|WTAP|9589|Wilms tumor 1 associated protein##AF374416|WTAP|9589|Wilms tumor 1 associated protein##NM_004906|WTAP|9589|Wilms tumor 1 associated protein##NM_152858|WTAP|9589|Wilms tumor 1 associated protein##BC000383|WTAP|9589|Wilms tumor 1 associated protein##BC004432|WTAP|9589|Wilms tumor 1 associated protein##BC069192|WTAP|9589|Wilms tumor 1 associated protein	0.237292	CTCF.p2:1:0.237
chr6	6106016	6106139	reg1021830.p1	7.472	+	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-98380	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	-98936	-	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-844387	+	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	214808	-	TSC_hg19_v1_chr6_-_6320897 NM_000129	214833	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	482873	+	BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86	0.969968	CTCF.p2:-19:0.970
chr12	24749840	24749993	reg1019517.p1	7.470	+	BC104436 BC104437 TSC_hg19_v1_chr12_-_24737100 AK057456	-12823	-	TSC_hg19_v1_chr12_-_24715349 AB081588 NM_152989 BC060773	-34551	-	BC014929 TSC_hg19_v1_chr12_-_24103967 AK303970	-645955	-	TSC_hg19_v1_chr12_-_25055230 CR749308 BC033864 NM_001178094	305358	-	TSC_hg19_v1_chr12_-_25055966 AK294879 NM_001178093	306071	-	TSC_hg19_v1_chr12_-_25101988 AK299088	352040	-	BC104436|LINC00477|144360|long intergenic non-protein coding RNA 477##BC104437|LINC00477|144360|long intergenic non-protein coding RNA 477##AK057456|LINC00477|144360|long intergenic non-protein coding RNA 477##AB081588|SOX5|6660|SRY (sex determining region Y)-box 5##NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5##BC060773|SOX5|6660|SRY (sex determining region Y)-box 5##BC014929|SOX5|6660|SRY (sex determining region Y)-box 5##AK303970|SOX5|6660|SRY (sex determining region Y)-box 5##CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK294879|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178093|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK299088|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	0.110489	
chr15	47319910	47320034	reg1017604.p1	7.470	+	TSC_hg19_v1_chr15_+_45927245 AK222463 AF042284 NM_021199 AF151802 AK313111 BC016836	-1392723	+	TSC_hg19_v1_chr15_+_45879759 AK128626	-1440199	+	TSC_hg19_v1_chr15_+_45879576 AK057545 BC004819 AK315581 AB527698	-1440365	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	156415	+	TSC_hg19_v1_chr15_+_48009541 AK290032	689616	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	690713	+	AK222463|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF042284|SQRDL|58472|sulfide quinone reductase-like (yeast)##NM_021199|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF151802|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK313111|SQRDL|58472|sulfide quinone reductase-like (yeast)##BC016836|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK128626|PLDN|26258|pallidin homolog (mouse)##AK057545|PLDN|26258|pallidin homolog (mouse)##BC004819|PLDN|26258|pallidin homolog (mouse)##AK315581|PLDN|26258|pallidin homolog (mouse)##AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	0.891943	CTCF.p2:-18:0.892
chr13	114909282	114909408	reg1016788.p1	7.469	+	TSC_hg19_v1_chr13_-_114898084 BC047242 BC038456 NM_007368	-11242	-	TSC_hg19_v1_chr13_-_114898058 AK128094	-11279	-	TSC_hg19_v1_chr13_-_114898028 AK295861 AK313795	-11320	-	TSC_hg19_v1_chr13_+_115000360 NM_001078645 NM_003903	91014	+	TSC_hg19_v1_chr13_+_115000402 AK296424 BC017244 BC010875 AK315302 U18291 AB590520 AF164598 CU677877	91117	+	TSC_hg19_v1_chr13_+_115047085 AY013250 NM_023011 NM_080687 BC023569 BC047735 AK294545 AK302003 AF318575	137769	+	BC047242|RASA3|22821|RAS p21 protein activator 3##BC038456|RASA3|22821|RAS p21 protein activator 3##NM_007368|RASA3|22821|RAS p21 protein activator 3##AK128094|RASA3|22821|RAS p21 protein activator 3##AK295861|RASA3|22821|RAS p21 protein activator 3##AK313795|RASA3|22821|RAS p21 protein activator 3##NM_001078645|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##NM_003903|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AK296424|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC017244|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC010875|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AK315302|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##U18291|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AF164598|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AY013250|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_023011|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_080687|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC023569|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC047735|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK294545|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK302003|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AF318575|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)	0.0	
chr15	89422039	89422154	reg1019922.p1	7.468	+	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	-75410	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	-239910	+	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	-257526	+	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	16702	-	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	34464	-	BC003610 AK095908 AK222735 AK223182 AK304627 AK310357 AK312640 U58516 AY141974 TSC_hg19_v1_chr15_-_89456611 NM_001114614 NM_005928	34543	-	U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan##BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein##BC003610|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK095908|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK222735|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK223182|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK304627|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK310357|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK312640|MFGE8|4240|milk fat globule-EGF factor 8 protein##U58516|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY141974|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_001114614|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_005928|MFGE8|4240|milk fat globule-EGF factor 8 protein	1.883081	CTCF.p2:-12:1.000	CTCF.p2:12:0.883
chr18	58756062	58756183	reg1018076.p2	7.468	+	AK314130 NM_005912	-716122	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-1188893	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-1391472	-	AF217289 BC101047 BC101048 BC101049 NM_031891	401652	+	AK096495 NM_173557	804181	-	AF109219 TSC_hg19_v1_chr18_-_59854208	1098072	-	AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.671437	CTCF.p2:-4:0.671
chr6	10466038	10466127	reg1018297.p1	7.468	+	AK296737 NM_001042425	-46291	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	-50614	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	-50807	-	AK307373 NM_145649 AK291767 AK310216 AL832714	55526	+	NM_001491	89866	+	AK313426 BX647668 NM_145655 BX647576 AL832719 BC130524	119932	+	AK296737|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001042425|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##AK307373|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145649|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK291767|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK310216|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832714|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK313426|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647668|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145655|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647576|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832719|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BC130524|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	0.991805	CTCF.p2:-20:0.992
chr7	20198457	20198569	reg1019550.p1	7.467	+	BX648384 NM_152774	-386110	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	-449867	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	-1013500	-	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	58467	-	AK295044 TSC_hg19_v1_chr7_+_20370337	171824	+	BC002630 NM_002214 M73780	172221	+	BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##AK295044|ITGB8|3696|integrin, beta 8##BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8	0.0	
chr2	101044252	101044393	reg1021392.p1	7.466	+	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	-10225	-	DQ020495 NM_198461	-105128	-	BC036895 TSC_hg19_v1_chr2_-_100759026 NM_002285	-285319	-	AB164464 NM_001011717	42621	+	TSC_hg19_v1_chr2_+_101179454 NM_024065 BC001021 AK300827 AF110511 AF267853	135114	+	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	392444	+	BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##DQ020495|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##NM_198461|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##BC036895|AFF3|3899|AF4/FMR2 family, member 3##NM_002285|AFF3|3899|AF4/FMR2 family, member 3##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S##NM_024065|PDCL3|79031|phosducin-like 3##BC001021|PDCL3|79031|phosducin-like 3##AK300827|PDCL3|79031|phosducin-like 3##AF110511|PDCL3|79031|phosducin-like 3##AF267853|PDCL3|79031|phosducin-like 3##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2	0.028205	
chr2	222922108	222922237	reg1019267.p2	7.466	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	-485162	-	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-2429818	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-2459583	+	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	236848	-	AK057009 NM_153038 BC109388	240740	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	241353	-	BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140##EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3	0.999356	CTCF.p2:-21:0.999
chr3	27763141	27763289	reg1017874.p1	7.466	+	TSC_hg19_v1_chr3_-_27525893 AK309734	-237285	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	-237390	-	AF047033 AF089726 NM_003615	-264971	-	AB031038 BC131712 NM_005442 AB463608 BC037568	578	-	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	986	-	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	519883	+	AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)	0.765013	CTCF.p2:-7:0.765
chr7	97557710	97557845	reg1019718.p1	7.466	+	TSC_hg19_v1_chr7_-_97501785 AK302189 M27396 AK316224 NM_001178075 NM_001178076 NM_001673 NM_183356	-55982	-	BC008723 TSC_hg19_v1_chr7_-_97501721 BC014621	-56073	-	AK302242 AK000379 NM_001178077 NM_133436	-56327	-	TSC_hg19_v1_chr7_-_97601600 AK309693 BC015431 BC042035	43817	-	BC062733 TSC_hg19_v1_chr7_-_97601645 BC029615	43866	-	TSC_hg19_v1_chr7_-_97601657 BC030024	43883	-	AK302189|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##M27396|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK316224|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178075|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178076|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001673|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_183356|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC008723|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC014621|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK302242|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK000379|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178077|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_133436|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC015431|MGC72080|389538|MGC72080 pseudogene##BC042035|MGC72080|389538|MGC72080 pseudogene##BC062733|MGC72080|389538|MGC72080 pseudogene##BC029615|MGC72080|389538|MGC72080 pseudogene	0.999894	CTCF.p2:4:1.000
chrX	284244	284389	reg1013236.p1	7.466	+	NM_018390 BC064136 BC005028 BC000888 BC032072	-86209	+	None	None	None	None	None	None	AK293506 NM_013239	63373	-	NM_000451 NM_006883 U89331	300762	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	1047268	-	NM_018390|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC064136|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC005028|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC000888|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC032072|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##AK293506|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_013239|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_000451|SHOX|6473|short stature homeobox##NM_006883|SHOX|6473|short stature homeobox##U89331|SHOX|6473|short stature homeobox##AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2	0.151322	
chr11	34381139	34381254	reg1001075.p2	7.465	+	TSC_hg19_v1_chr11_-_34379556 AK291744 NM_145804	-1641	-	TSC_hg19_v1_chr11_+_34127208 AK294044 AL136882 AK001636 BC014440 BC020205	-253946	+	NM_001144030 NM_024662 TSC_hg19_v1_chr11_+_34127175 AK022241 AK225341 BC035558 AB051496	-254039	+	TSC_hg19_v1_chr11_+_34460487 AK291585 NM_001752 BC110398 AK315350 X04076 BC112217 BC112219	79278	+	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	79353	+	AB528439 AK290817 AF115402 NM_001243081 NM_198381	152035	-	AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##AK294044|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AL136882|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK001636|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC014440|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC020205|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_001144030|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_024662|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK022241|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK225341|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC035558|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AB051496|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK291585|CAT|847|catalase##NM_001752|CAT|847|catalase##BC110398|CAT|847|catalase##AK315350|CAT|847|catalase##X04076|CAT|847|catalase##BC112217|CAT|847|catalase##BC112219|CAT|847|catalase##AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase##AK290817|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115402|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243081|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_198381|ELF5|2001|E74-like factor 5 (ets domain transcription factor)	0.47436	CTCF.p2:15:0.474
chr11	65337594	65337725	reg1017487.p1	7.465	+	TSC_hg19_v1_chr11_-_65326129 AK299351	-11469	-	TSC_hg19_v1_chr11_-_65325673 AK024477 NM_001130144 NM_001164266 NM_021070	-11791	-	TSC_hg19_v1_chr11_-_65325391 AF135960 BC136277	-12210	-	AF085877 TSC_hg19_v1_chr11_-_65337892 AK057616	160	-	TSC_hg19_v1_chr11_+_65337947 AB001740 NM_006396 BC014791 DQ891782 DQ894966	283	+	BC032373 NM_001098784 NM_001098785 NM_152832 AF052151 TSC_hg19_v1_chr11_+_65340004	2272	+	AK299351|LTBP3|4054|latent transforming growth factor beta binding protein 3##AK024477|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_001130144|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_001164266|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_021070|LTBP3|4054|latent transforming growth factor beta binding protein 3##AF135960|LTBP3|4054|latent transforming growth factor beta binding protein 3##BC136277|LTBP3|4054|latent transforming growth factor beta binding protein 3##AF085877|LOC254100|254100|uncharacterized LOC254100##AK057616|LOC254100|254100|uncharacterized LOC254100##AB001740|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##NM_006396|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##BC014791|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##DQ891782|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##DQ894966|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##BC032373|FAM89B|23625|family with sequence similarity 89, member B##NM_001098784|FAM89B|23625|family with sequence similarity 89, member B##NM_001098785|FAM89B|23625|family with sequence similarity 89, member B##NM_152832|FAM89B|23625|family with sequence similarity 89, member B##AF052151|FAM89B|23625|family with sequence similarity 89, member B	0.088132	
chr14	29220797	29220920	reg1019887.p1	7.465	+	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	-2153870	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	-3701620	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-4117440	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	15370	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	16055	+	TSC_hg19_v1_chr14_+_29241992 BX248251	21137	+	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23	0.859884	CTCF.p2:-8:0.860
chr16	25117907	25118046	reg1018346.p1	7.465	+	TSC_hg19_v1_chr16_+_25078227 BC023651 AK093382	-39687	+	TSC_hg19_v1_chr16_-_25026691 AK027567 AK291691 BC080195 AK301500 NM_001006634 NM_018054	-91284	-	AJ306731 AJ306732 TSC_hg19_v1_chr16_-_25026604	-91364	-	TSC_hg19_v1_chr16_+_25123062 NM_001032391 NM_016309 AK223364 AF151826 BC001214	5085	+	TSC_hg19_v1_chr16_+_25123102 AK025884 AK225271 AK291885 AK314409 BC014217 AF037601 CU674610 AL137283 CU676933	5221	+	AB013456 AF067797 NM_001169 AK222975 AK222964	110324	+	BC023651|LOC283887|283887|uncharacterized LOC283887##AK093382|LOC283887|283887|uncharacterized LOC283887##AK027567|ARHGAP17|55114|Rho GTPase activating protein 17##AK291691|ARHGAP17|55114|Rho GTPase activating protein 17##BC080195|ARHGAP17|55114|Rho GTPase activating protein 17##AK301500|ARHGAP17|55114|Rho GTPase activating protein 17##NM_001006634|ARHGAP17|55114|Rho GTPase activating protein 17##NM_018054|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306731|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306732|ARHGAP17|55114|Rho GTPase activating protein 17##NM_001032391|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_016309|LCMT1|51451|leucine carboxyl methyltransferase 1##AK223364|LCMT1|51451|leucine carboxyl methyltransferase 1##AF151826|LCMT1|51451|leucine carboxyl methyltransferase 1##BC001214|LCMT1|51451|leucine carboxyl methyltransferase 1##AK025884|LCMT1|51451|leucine carboxyl methyltransferase 1##AK225271|LCMT1|51451|leucine carboxyl methyltransferase 1##AK291885|LCMT1|51451|leucine carboxyl methyltransferase 1##AK314409|LCMT1|51451|leucine carboxyl methyltransferase 1##BC014217|LCMT1|51451|leucine carboxyl methyltransferase 1##AF037601|LCMT1|51451|leucine carboxyl methyltransferase 1##AL137283|LCMT1|51451|leucine carboxyl methyltransferase 1##AB013456|AQP8|343|aquaporin 8##AF067797|AQP8|343|aquaporin 8##NM_001169|AQP8|343|aquaporin 8##AK222975|AQP8|343|aquaporin 8##AK222964|AQP8|343|aquaporin 8	0.016916	
chr17	36489672	36489772	reg1018869.p1	7.465	+	TSC_hg19_v1_chr17_+_36453138 AK172741 AK225031 HQ258365 BC006235	-36585	+	NM_032351 AK293605 BC130382 BC130384 TSC_hg19_v1_chr17_+_36453120	-36668	+	BC067792 TSC_hg19_v1_chr17_-_36413224	-76485	-	AY584611 NM_001004334	9970	-	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	18141	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	94983	+	AK172741|MRPL45|84311|mitochondrial ribosomal protein L45##AK225031|MRPL45|84311|mitochondrial ribosomal protein L45##HQ258365|MRPL45|84311|mitochondrial ribosomal protein L45##BC006235|MRPL45|84311|mitochondrial ribosomal protein L45##NM_032351|MRPL45|84311|mitochondrial ribosomal protein L45##AK293605|MRPL45|84311|mitochondrial ribosomal protein L45##BC130382|MRPL45|84311|mitochondrial ribosomal protein L45##BC130384|MRPL45|84311|mitochondrial ribosomal protein L45##BC067792|LOC440434|440434|aminopeptidase puromycin sensitive pseudogene##AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23	0.99852	CTCF.p2:10:0.999
chr3	88268540	88268659	reg1020291.p1	7.465	+	AL832398 NM_173824 TSC_hg19_v1_chr3_+_88199126 BC024188 AK297719 AK313547	-69571	+	NM_001195308 BC005222	-69575	-	AF543494 NM_018293	-80338	+	AF213459 NM_005233 NM_182644 BC063282 TSC_hg19_v1_chr3_+_89156770	888122	+	M83941 AF213460 BC026247 TSC_hg19_v1_chr3_+_89156840 AK291411 AB384708	888251	+	AB590252 DQ892389 DQ895602 TSC_hg19_v1_chr3_-_93692741 Y00692 AK292994	5424077	-	AL832398|C3orf38|285237|chromosome 3 open reading frame 38##NM_173824|C3orf38|285237|chromosome 3 open reading frame 38##BC024188|C3orf38|285237|chromosome 3 open reading frame 38##AK297719|C3orf38|285237|chromosome 3 open reading frame 38##AK313547|C3orf38|285237|chromosome 3 open reading frame 38##NM_001195308|CGGBP1|8545|CGG triplet repeat binding protein 1##BC005222|CGGBP1|8545|CGG triplet repeat binding protein 1##AF543494|ZNF654|55279|zinc finger protein 654##NM_018293|ZNF654|55279|zinc finger protein 654##AF213459|EPHA3|2042|EPH receptor A3##NM_005233|EPHA3|2042|EPH receptor A3##NM_182644|EPHA3|2042|EPH receptor A3##BC063282|EPHA3|2042|EPH receptor A3##M83941|EPHA3|2042|EPH receptor A3##AF213460|EPHA3|2042|EPH receptor A3##BC026247|EPHA3|2042|EPH receptor A3##AK291411|EPHA3|2042|EPH receptor A3##DQ892389|PROS1|5627|protein S (alpha)##DQ895602|PROS1|5627|protein S (alpha)##Y00692|PROS1|5627|protein S (alpha)##AK292994|PROS1|5627|protein S (alpha)	0.929887	CTCF.p2:-5:0.930
chrX	73712907	73713017	reg1019053.p2	7.465	+	NM_006517 TSC_hg19_v1_chrX_+_73641331 U05315 AB085789	-71716	+	BC021176 NM_203303 TSC_hg19_v1_chrX_+_73524041 EU446947 EU831786 EU831864 CU676854	-188900	+	TSC_hg19_v1_chrX_-_73513379 AK311345	-199588	-	AF155109 TSC_hg19_v1_chrX_-_73834424 BC013357	121455	-	BC002451 TSC_hg19_v1_chrX_-_73834428	121466	-	TSC_hg19_v1_chrX_-_73834444 AK001334	121477	-	NM_006517|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##U05315|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##AB085789|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##BC021176|ZCCHC13|389874|zinc finger, CCHC domain containing 13##NM_203303|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU446947|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831786|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831864|ZCCHC13|389874|zinc finger, CCHC domain containing 13##AK311345|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##AF155109|RLIM|51132|ring finger protein, LIM domain interacting##BC013357|RLIM|51132|ring finger protein, LIM domain interacting##AK001334|RLIM|51132|ring finger protein, LIM domain interacting	0.964064	CTCF.p2:-13:0.964
chr10	29675423	29675557	reg1022265.p1	7.464	+	NM_032517 BC021730 AY358694	-97474	+	TSC_hg19_v1_chr10_+_28966451 NM_012342 AK290639 BC019252 AK223065 U23070	-709043	+	TSC_hg19_v1_chr10_+_28878692 BC010356	-796784	+	TSC_hg19_v1_chr10_+_29698475 BC066966 BC050354	22979	+	BC107795 AK056080 TSC_hg19_v1_chr10_+_29698485	22995	+	TSC_hg19_v1_chr10_+_29698496 BC073888	23008	+	NM_032517|LYZL1|84569|lysozyme-like 1##BC021730|LYZL1|84569|lysozyme-like 1##AY358694|LYZL1|84569|lysozyme-like 1##NM_012342|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK290639|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC019252|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK223065|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##U23070|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC010356|WAC|51322|WW domain containing adaptor with coiled-coil##BC066966|LOC387647|387647|patched domain containing 3 pseudogene##BC050354|LOC387647|387647|patched domain containing 3 pseudogene##BC107795|LOC387647|387647|patched domain containing 3 pseudogene##AK056080|LOC387647|387647|patched domain containing 3 pseudogene##BC073888|LOC387647|387647|patched domain containing 3 pseudogene	0.996902	CTCF.p2:-2:0.997
chr12	116504563	116504682	reg1017663.p1	7.464	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-1382482	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1658404	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1660698	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	210328	-	TSC_hg19_v1_chr12_-_116715263 AY338463	210538	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	466607	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.695797	CTCF.p2:-3:0.696
chr6	33086463	33086580	reg1019401.p2	7.464	+	NM_001242524 NM_001242525	-37967	-	NM_002121 AK291986 AK303153 TSC_hg19_v1_chr6_+_33043767 AK301322 J03041 X01426 M83664 AK313305 BC013184 AY831401 AY831402 AY831403 AY804132 AY804142 X03067 AY804140 AY804134 AY804135 AY804137 AY804138 AY804139 AY804143 BC007963 BC015000 AB208978 AY804141 M28200 DQ284441 AY804133 AY804136 AB529034 DQ891050 DQ894229 CU680546 AY656678 AY656679 AY656680 AY831404 BT019780 GQ891549 M28202 M21886	-42718	+	X00457 AB590198 CU679537 DQ893463 DQ896324 AB209058 AK292709 TSC_hg19_v1_chr6_-_33041427 BC009956 M27487 NM_033554	-45153	-	TSC_hg19_v1_chr6_-_33160241 BC053886 NM_001163771 NM_080679 NM_080680 NM_080681	73744	-	TSC_hg19_v1_chr6_-_33168171 BT007280 HQ692844 HQ709179 AB384890	81687	-	M84820 AB209244 X63522 TSC_hg19_v1_chr6_-_33168436 AK225842 BC001167 NM_021976 AK295759	81882	-	NM_001242524|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_001242525|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_002121|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK291986|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK303153|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK301322|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##J03041|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X01426|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M83664|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK313305|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC013184|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831401|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831402|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831403|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804132|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804142|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X03067|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804140|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804134|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804135|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804137|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804138|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804139|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804143|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC007963|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC015000|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AB208978|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804141|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M28200|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ284441|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804133|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804136|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ891050|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ894229|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656678|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656679|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656680|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831404|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BT019780|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##GQ891549|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M28202|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M21886|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X00457|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ893463|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ896324|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AB209058|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AK292709|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##BC009956|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##M27487|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_033554|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##BC053886|COL11A2|1302|collagen, type XI, alpha 2##NM_001163771|COL11A2|1302|collagen, type XI, alpha 2##NM_080679|COL11A2|1302|collagen, type XI, alpha 2##NM_080680|COL11A2|1302|collagen, type XI, alpha 2##NM_080681|COL11A2|1302|collagen, type XI, alpha 2##BT007280|RXRB|6257|retinoid X receptor, beta##M84820|RXRB|6257|retinoid X receptor, beta##AB209244|RXRB|6257|retinoid X receptor, beta##X63522|RXRB|6257|retinoid X receptor, beta##AK225842|RXRB|6257|retinoid X receptor, beta##BC001167|RXRB|6257|retinoid X receptor, beta##NM_021976|RXRB|6257|retinoid X receptor, beta##AK295759|RXRB|6257|retinoid X receptor, beta	0.928396	CTCF.p2:-15:0.928
chrX	110342191	110342317	reg1018737.p1	7.464	+	NM_002578 TSC_hg19_v1_chrX_+_110339395	-2853	+	AK290504 NM_001128166 NM_001128167 TSC_hg19_v1_chrX_+_110187624 AK315284	-154707	+	NM_001143981 NM_001143982 NM_001143983	-302969	-	NM_001128168 NM_001128172 NM_001128173 AB102659 AF068864 AM943850 AM943851 AM943852	24063	+	TSC_hg19_v1_chrX_-_110513712 AF029232 AK312701	171450	-	AJ000388 TSC_hg19_v1_chrX_-_110513775 NM_014289	171509	-	NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001143981|CHRDL1|91851|chordin-like 1##NM_001143982|CHRDL1|91851|chordin-like 1##NM_001143983|CHRDL1|91851|chordin-like 1##NM_001128168|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128172|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128173|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AB102659|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AF068864|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943850|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943851|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943852|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AF029232|CAPN6|827|calpain 6##AK312701|CAPN6|827|calpain 6##AJ000388|CAPN6|827|calpain 6##NM_014289|CAPN6|827|calpain 6	1.317306	CTCF.p2:-15:0.998	CTCF.p2:-71:0.220
chr1	120286831	120286970	reg1020567.p1	7.463	+	NM_006623 AK315360 BC011262 TSC_hg19_v1_chr1_+_120254558 AK309662 AK310132 AF171237 BC000303 BC001349 BC023235 DQ892073 EU176546 AB528378 CR456795	-32369	+	NM_001080470	-96511	-	NM_000862 S45679 AK291556 BC031999 M35493 X53321 M27137 DQ891161 DQ894342 CU689258 X55997	-236938	+	CR456850 BC044217 X83618 AK301594 AK313590 TSC_hg19_v1_chr1_-_120311529 AK302276 AK303777 NM_001166107 NM_005518	24610	-	AY007243 AF345934 BC017089 TSC_hg19_v1_chr1_-_120354084 AF254415 AY126670 AY126671 AY126672 NM_001159352 NM_001159353 NM_032044	67230	-	NM_001047980	100878	-	NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase##AK315360|PHGDH|26227|phosphoglycerate dehydrogenase##BC011262|PHGDH|26227|phosphoglycerate dehydrogenase##AK309662|PHGDH|26227|phosphoglycerate dehydrogenase##AK310132|PHGDH|26227|phosphoglycerate dehydrogenase##AF171237|PHGDH|26227|phosphoglycerate dehydrogenase##BC000303|PHGDH|26227|phosphoglycerate dehydrogenase##BC001349|PHGDH|26227|phosphoglycerate dehydrogenase##BC023235|PHGDH|26227|phosphoglycerate dehydrogenase##DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase##EU176546|PHGDH|26227|phosphoglycerate dehydrogenase##CR456795|PHGDH|26227|phosphoglycerate dehydrogenase##NM_001080470|ZNF697|90874|zinc finger protein 697##NM_000862|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##S45679|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##AK291556|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##BC031999|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M35493|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X53321|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M27137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ891161|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ894342|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X55997|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##CR456850|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##BC044217|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##X83618|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK301594|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK313590|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK302276|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK303777|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_001166107|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_005518|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AY007243|REG4|83998|regenerating islet-derived family, member 4##AF345934|REG4|83998|regenerating islet-derived family, member 4##BC017089|REG4|83998|regenerating islet-derived family, member 4##AF254415|REG4|83998|regenerating islet-derived family, member 4##AY126670|REG4|83998|regenerating islet-derived family, member 4##AY126671|REG4|83998|regenerating islet-derived family, member 4##AY126672|REG4|83998|regenerating islet-derived family, member 4##NM_001159352|REG4|83998|regenerating islet-derived family, member 4##NM_001159353|REG4|83998|regenerating islet-derived family, member 4##NM_032044|REG4|83998|regenerating islet-derived family, member 4##NM_001047980|NBPF7|343505|neuroblastoma breakpoint family, member 7	0.979732	CTCF.p2:-17:0.980
chr1	45180765	45180917	reg1018733.p1	7.463	+	BC026115 NM_001145636	-40448	+	AK296548 TSC_hg19_v1_chr1_-_45140143 BC007521	-40693	-	CR457348 AK026006 AK225405 TSC_hg19_v1_chr1_-_45140099 BC064520 NM_024587 AL832539	-40754	-	TSC_hg19_v1_chr1_+_45205518 AB264115 NM_006845	24657	+	AK124208 AK300756 AK312606 TSC_hg19_v1_chr1_+_45205533 BC008764 U63743 BC014924	24701	+	TSC_hg19_v1_chr1_+_45205568 AK290688 AB590244 BT006759 CR450302 CU677119 CU679091 DQ893800 EU176178	24740	+	BC026115|C1orf228|339541|chromosome 1 open reading frame 228##NM_001145636|C1orf228|339541|chromosome 1 open reading frame 228##AK296548|TMEM53|79639|transmembrane protein 53##BC007521|TMEM53|79639|transmembrane protein 53##CR457348|TMEM53|79639|transmembrane protein 53##AK026006|TMEM53|79639|transmembrane protein 53##AK225405|TMEM53|79639|transmembrane protein 53##BC064520|TMEM53|79639|transmembrane protein 53##NM_024587|TMEM53|79639|transmembrane protein 53##AL832539|TMEM53|79639|transmembrane protein 53##AB264115|KIF2C|11004|kinesin family member 2C##NM_006845|KIF2C|11004|kinesin family member 2C##AK300756|KIF2C|11004|kinesin family member 2C##AK312606|KIF2C|11004|kinesin family member 2C##BC008764|KIF2C|11004|kinesin family member 2C##U63743|KIF2C|11004|kinesin family member 2C##BC014924|KIF2C|11004|kinesin family member 2C##AK290688|KIF2C|11004|kinesin family member 2C##BT006759|KIF2C|11004|kinesin family member 2C##CR450302|KIF2C|11004|kinesin family member 2C##DQ893800|KIF2C|11004|kinesin family member 2C##EU176178|KIF2C|11004|kinesin family member 2C	0.994454	CTCF.p2:-14:0.994
chr5	158942972	158943081	reg1018722.p1	7.463	+	BC074723 M65272 NM_002187	-185552	-	TSC_hg19_v1_chr5_+_158690297 AY444562 AK057996 BC013425	-252740	+	NM_145049	-252938	+	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	400799	+	TSC_hg19_v1_chr5_+_159436145 AK315262	493121	+	AK222641 TSC_hg19_v1_chr5_+_159436161 AK222984 NM_003314 U46570	493141	+	BC074723|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##M65272|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_002187|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##AY444562|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK057996|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##BC013425|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_145049|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##AK315262|TTC1|7265|tetratricopeptide repeat domain 1##AK222641|TTC1|7265|tetratricopeptide repeat domain 1##AK222984|TTC1|7265|tetratricopeptide repeat domain 1##NM_003314|TTC1|7265|tetratricopeptide repeat domain 1##U46570|TTC1|7265|tetratricopeptide repeat domain 1	0.76203	CTCF.p2:6:0.762
chr8	21911659	21911746	reg1017272.p2	7.463	+	TSC_hg19_v1_chr8_+_21911080 NM_001114137 BC052805	-594	+	BC105131 BC113489 BC143789 AY358869 AB009249 BC069475 NM_003867 HQ258756	-11288	+	AY262114 NM_182795 BC068078	-29345	+	NM_001114136 NM_001114139 TSC_hg19_v1_chr8_+_21912417 AK289650 AK091581 AK308807	674	+	TSC_hg19_v1_chr8_+_21912441 AK295452	746	+	TSC_hg19_v1_chr8_+_21915374 BC006318 BC017445 NM_001114135	3671	+	NM_001114137|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##BC052805|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##BC105131|FGF17|8822|fibroblast growth factor 17##BC113489|FGF17|8822|fibroblast growth factor 17##BC143789|FGF17|8822|fibroblast growth factor 17##AY358869|FGF17|8822|fibroblast growth factor 17##AB009249|FGF17|8822|fibroblast growth factor 17##BC069475|FGF17|8822|fibroblast growth factor 17##NM_003867|FGF17|8822|fibroblast growth factor 17##HQ258756|FGF17|8822|fibroblast growth factor 17##AY262114|NPM2|10361|nucleophosmin/nucleoplasmin 2##NM_182795|NPM2|10361|nucleophosmin/nucleoplasmin 2##BC068078|NPM2|10361|nucleophosmin/nucleoplasmin 2##NM_001114136|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##NM_001114139|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##AK289650|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##AK091581|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##AK308807|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##AK295452|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##BC006318|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##BC017445|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##NM_001114135|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)	0.0	
chr12	7070004	7070110	reg1016368.p1	7.462	+	TSC_hg19_v1_chr12_+_7060554 AK309037 M74903 AF178946	-9455	+	TSC_hg19_v1_chr12_+_7060550 AK290421	-9509	+	AK223629 TSC_hg19_v1_chr12_+_7060538	-9519	+	TSC_hg19_v1_chr12_-_7079814 AB528395 DQ891808 EU176626 BC014766 BC013228 AF178980 AF150962	9664	-	TSC_hg19_v1_chr12_-_7079828 AK298217 AK301316 AF126021 NM_007273 BC110322 NM_001144831	9818	-	NM_006331 BC055314 TSC_hg19_v1_chr12_+_7080072 AK298207	9952	+	M74903|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AF178946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK290421|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK223629|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ891808|PHB2|11331|prohibitin 2##EU176626|PHB2|11331|prohibitin 2##BC014766|PHB2|11331|prohibitin 2##BC013228|PHB2|11331|prohibitin 2##AF178980|PHB2|11331|prohibitin 2##AF150962|PHB2|11331|prohibitin 2##AK298217|PHB2|11331|prohibitin 2##AK301316|PHB2|11331|prohibitin 2##AF126021|PHB2|11331|prohibitin 2##NM_007273|PHB2|11331|prohibitin 2##BC110322|PHB2|11331|prohibitin 2##NM_001144831|PHB2|11331|prohibitin 2##NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	0.61812	CTCF.p2:41:0.550
chr17_ctg5_hap1	601778	601897	reg1019934.p1	7.462	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.538436	CTCF.p2:9:0.538
chr3	192185180	192185299	reg1018592.p2	7.462	+	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-58396	-	AY858112 NM_001083308	-1006288	+	AK090630 AX746546 NM_198152	-1136915	-	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	260126	-	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	450397	-	BC036194 BC045582 NM_178496	450702	-	AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing##AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2	0.984173	CTCF.p2:-6:0.984
chr22	26098082	26098204	reg1017485.p1	7.461	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-137197	+	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	-137344	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	-254067	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	39977	+	TSC_hg19_v1_chr22_+_26138168 AY077700	40041	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	467294	+	BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##AY077700|MYO18B|84700|myosin XVIIIB##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.128155	
chr22	51001258	51001398	reg1015107.p1	7.461	+	NM_001123225	-1	-	BC009980 NM_138433	-14867	+	NM_001014440	-30321	-	BC143071 BC150318 D87812 U62733 BC142954 NM_001145137	15096	-	Y08682 Y08683 AK291316 NM_004377 NM_152246 AK223174 U66828 AK297866 AK299395 NM_001145134 NM_001145135 NM_001145136 NM_152245	15642	-	TSC_hg19_v1_chr22_-_51021250 BC024286 AL096781 CU012980 CU013268 HQ258226 AB528104 BC037162 BC050443	19898	-	NM_001123225|SYCE3|644186|synaptonemal complex central element protein 3##BC009980|KLHDC7B|113730|kelch domain containing 7B##NM_138433|KLHDC7B|113730|kelch domain containing 7B##NM_001014440|ODF3B|440836|outer dense fiber of sperm tails 3B##BC143071|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##BC150318|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##D87812|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##U62733|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##BC142954|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##NM_001145137|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##Y08682|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##Y08683|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##AK291316|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##NM_004377|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##NM_152246|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##AK223174|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##U66828|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##AK297866|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##AK299395|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##NM_001145134|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##NM_001145135|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##NM_001145136|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##NM_152245|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##BC024286|CHKB|1120|choline kinase beta##AL096781|CHKB|1120|choline kinase beta##CU012980|CHKB|1120|choline kinase beta##CU013268|CHKB|1120|choline kinase beta##HQ258226|CHKB|1120|choline kinase beta##BC037162|CHKB|1120|choline kinase beta##BC050443|CHKB|1120|choline kinase beta	0.0	
chr20	31533634	31533777	reg1019778.p1	7.460	+	TSC_hg19_v1_chr20_+_31407780 AK312590 BC128442	-125909	+	TSC_hg19_v1_chr20_+_31407759 NM_012325 AK297273 BC106068 U24166 BC109281 BC040410	-125970	+	TSC_hg19_v1_chr20_+_31367638 AF176228 NM_175850	-166058	+	BC029528 AF401350 BC026118 NM_080675	58529	-	TSC_hg19_v1_chr20_+_31595393 AK172819 AK027068 NM_025227	61696	+	TSC_hg19_v1_chr20_+_31595480 AY358723 AK304064	61776	+	AK312590|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC128442|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##NM_012325|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##AK297273|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC106068|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##U24166|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC109281|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##BC040410|MAPRE1|22919|microtubule-associated protein, RP/EB family, member 1##AF176228|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##NM_175850|DNMT3B|1789|DNA (cytosine-5-)-methyltransferase 3 beta##BC029528|SUN5|140732|Sad1 and UNC84 domain containing 5##AF401350|SUN5|140732|Sad1 and UNC84 domain containing 5##BC026118|SUN5|140732|Sad1 and UNC84 domain containing 5##NM_080675|SUN5|140732|Sad1 and UNC84 domain containing 5##AK172819|BPIFB2|80341|BPI fold containing family B, member 2##AK027068|BPIFB2|80341|BPI fold containing family B, member 2##NM_025227|BPIFB2|80341|BPI fold containing family B, member 2##AY358723|BPIFB2|80341|BPI fold containing family B, member 2##AK304064|BPIFB2|80341|BPI fold containing family B, member 2	0.010858	
chr10	46962662	46962779	reg1018396.p2	7.459	+	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-321699	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	-322032	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	-342724	-	BC139914 AK290186 TSC_hg19_v1_chr10_-_46970538	7790	-	TSC_hg19_v1_chr10_-_46970597 AK131036 AK293632 NM_031912 NM_181519	7880	-	BC011672 NM_014696	30825	+	BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##BC139914|SYT15|83849|synaptotagmin XV##AK290186|SYT15|83849|synaptotagmin XV##AK131036|SYT15|83849|synaptotagmin XV##AK293632|SYT15|83849|synaptotagmin XV##NM_031912|SYT15|83849|synaptotagmin XV##NM_181519|SYT15|83849|synaptotagmin XV##BC011672|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##NM_014696|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2	0.956548	CTCF.p2:-7:0.957
chr13	24142047	24142175	reg1019077.p1	7.459	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-134271	-	TSC_hg19_v1_chr13_-_23949652 AK125458	-192461	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	-386996	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	2344	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	11421	+	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	320905	+	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.0	
chr1	54425475	54425571	reg1016361.p2	7.459	+	TSC_hg19_v1_chr1_+_54412103 BC013101	-13398	+	TSC_hg19_v1_chr1_+_54412028 AK074521 AK075201 NM_052940 AK095767	-13480	+	TSC_hg19_v1_chr1_-_54411248 AK225916 AF100747 BC005245 NM_016126	-14257	-	BC140760 BC144466 BC171743 NM_001010978 BC103740 BC127708 BC127709	58305	-	CU678378 BC003106 TSC_hg19_v1_chr1_-_54518878 AF047439 AK075505 AX775909 BC016374 AK225624	93311	-	TSC_hg19_v1_chr1_-_54518888 BC095464	93371	-	BC013101|LRRC42|115353|leucine rich repeat containing 42##AK074521|LRRC42|115353|leucine rich repeat containing 42##AK075201|LRRC42|115353|leucine rich repeat containing 42##NM_052940|LRRC42|115353|leucine rich repeat containing 42##AK095767|LRRC42|115353|leucine rich repeat containing 42##AK225916|HSPB11|51668|heat shock protein family B (small), member 11##AF100747|HSPB11|51668|heat shock protein family B (small), member 11##BC005245|HSPB11|51668|heat shock protein family B (small), member 11##NM_016126|HSPB11|51668|heat shock protein family B (small), member 11##BC140760|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##BC144466|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##BC171743|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##NM_001010978|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##BC103740|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##BC127708|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##BC127709|LDLRAD1|388633|low density lipoprotein receptor class A domain containing 1##BC003106|TMEM59|9528|transmembrane protein 59##AF047439|TMEM59|9528|transmembrane protein 59##AK075505|TMEM59|9528|transmembrane protein 59##AX775909|TMEM59|9528|transmembrane protein 59##BC016374|TMEM59|9528|transmembrane protein 59##AK225624|TMEM59|9528|transmembrane protein 59##BC095464|TMEM59|9528|transmembrane protein 59	0.020834	
chr17	41987685	41987784	reg1018021.p2	7.459	+	BC030287 CR936730 NM_005374 AK311166	-2615	-	AL136554 X82895 TSC_hg19_v1_chr17_-_41984895 AK299518 AK223560 AK294564 AK299286	-2839	-	TSC_hg19_v1_chr17_-_41977993 AK299321 CR936598	-9754	-	X00491 NM_002722	32082	-	BC041057 NM_004160	94102	-	AK314432 AK300923 BC111713 AY116538 NM_153006 AK074407	94284	+	BC030287|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##CR936730|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##NM_005374|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK311166|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AL136554|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299518|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK223560|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK294564|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299286|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299321|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##CR936598|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##X00491|PPY|5539|pancreatic polypeptide##NM_002722|PPY|5539|pancreatic polypeptide##BC041057|PYY|5697|peptide YY##NM_004160|PYY|5697|peptide YY##AK314432|NAGS|162417|N-acetylglutamate synthase##AK300923|NAGS|162417|N-acetylglutamate synthase##BC111713|NAGS|162417|N-acetylglutamate synthase##AY116538|NAGS|162417|N-acetylglutamate synthase##NM_153006|NAGS|162417|N-acetylglutamate synthase##AK074407|NAGS|162417|N-acetylglutamate synthase	0.986998	CTCF.p2:-1:0.987
chr2	218621395	218621500	reg1018823.p2	7.459	+	BC029516 NM_003284	-896666	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-1061187	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-1061881	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	187334	-	AK001785 TSC_hg19_v1_chr2_-_218843551	222099	-	TSC_hg19_v1_chr2_-_218867719 AK309785	246276	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.999097	CTCF.p2:1:0.999
chr15	40399199	40399337	reg1017977.p2	7.458	+	BC104983 BC104985 BC069328 BC069505 NM_033503 AK024472	-658	-	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	-982	-	TSC_hg19_v1_chr15_+_40331506 AK127696	-67790	+	TSC_hg19_v1_chr15_-_40401076 BC060783 BC070043 NM_001003940	1827	-	NM_001211 AF053306 TSC_hg19_v1_chr15_+_40453249 AK296795 AK312709	53961	+	TSC_hg19_v1_chr15_+_40453269 AK296984 AF107297 BC018739 AF046918 AB208782 AF035933 AF068760 AF046079 AB384719 CU676304	54074	+	BC104983|BMF|90427|Bcl2 modifying factor##BC104985|BMF|90427|Bcl2 modifying factor##BC069328|BMF|90427|Bcl2 modifying factor##BC069505|BMF|90427|Bcl2 modifying factor##NM_033503|BMF|90427|Bcl2 modifying factor##AK024472|BMF|90427|Bcl2 modifying factor##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor##AK127696|LOC100131089|100131089|uncharacterized LOC100131089##BC060783|BMF|90427|Bcl2 modifying factor##BC070043|BMF|90427|Bcl2 modifying factor##NM_001003940|BMF|90427|Bcl2 modifying factor##NM_001211|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF053306|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AK296795|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AK312709|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AK296984|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF107297|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##BC018739|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF046918|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AB208782|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF035933|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF068760|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF046079|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)	0.109826	
chr19	46367400	46367519	reg1019823.p1	7.458	+	AF049526 TSC_hg19_v1_chr19_-_46366406 Y10931 AB210010 BC030214 AK300252 BX649165 AK130602 NM_004819	-1015	-	BC057785 AB587490 AM393487 BC146683 BC136351 BC136352 BC144018 AK098837 AK223347 AL136761 NM_030785	-48941	-	TSC_hg19_v1_chr19_-_46296053 NM_004943	-71528	-	BC016024 NM_004497 TSC_hg19_v1_chr19_+_46367583 AK223473 AB464526 BT006720 CU677549 L12141	156	+	AK223622 TSC_hg19_v1_chr19_-_46389398 AK315060 BC038222 NM_015649 AY278022 BC039002	21903	-	TSC_hg19_v1_chr19_-_46405872 BC044311 NM_001012643	38447	-	AF049526|SYMPK|8189|symplekin##Y10931|SYMPK|8189|symplekin##AB210010|SYMPK|8189|symplekin##BC030214|SYMPK|8189|symplekin##AK300252|SYMPK|8189|symplekin##BX649165|SYMPK|8189|symplekin##AK130602|SYMPK|8189|symplekin##NM_004819|SYMPK|8189|symplekin##BC057785|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AM393487|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC146683|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC136351|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC136352|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC144018|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AK098837|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AK223347|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AL136761|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##NM_030785|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##NM_004943|DMWD|1762|dystrophia myotonica, WD repeat containing##BC016024|FOXA3|3171|forkhead box A3##NM_004497|FOXA3|3171|forkhead box A3##AK223473|FOXA3|3171|forkhead box A3##BT006720|FOXA3|3171|forkhead box A3##L12141|FOXA3|3171|forkhead box A3##AK223622|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##AK315060|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##BC038222|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##NM_015649|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##AY278022|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##BC039002|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##BC044311|MYPOP|339344|Myb-related transcription factor, partner of profilin##NM_001012643|MYPOP|339344|Myb-related transcription factor, partner of profilin	0.338088	CTCF.p2:13:0.338
chr20	60877698	60877878	reg1003708.p3	7.458	+	TSC_hg19_v1_chr20_+_60813616 AB018315 AY028168 BC000296 BC004455 BC018812	-64167	+	TSC_hg19_v1_chr20_+_60813579 AF392447 AK000230 AK296595 AK315576 NM_014835 NM_144498	-64208	+	AK291851 TSC_hg19_v1_chr20_+_60813576	-64212	+	TSC_hg19_v1_chr20_+_60878021 AK307459	192	+	TSC_hg19_v1_chr20_+_60878032 NM_007002 NM_175573	247	+	TSC_hg19_v1_chr20_+_60878052 BC017245 BC093021 BC003059 AK297567 D64154	272	+	AB018315|OSBPL2|9885|oxysterol binding protein-like 2##AY028168|OSBPL2|9885|oxysterol binding protein-like 2##BC000296|OSBPL2|9885|oxysterol binding protein-like 2##BC004455|OSBPL2|9885|oxysterol binding protein-like 2##BC018812|OSBPL2|9885|oxysterol binding protein-like 2##AF392447|OSBPL2|9885|oxysterol binding protein-like 2##AK000230|OSBPL2|9885|oxysterol binding protein-like 2##AK296595|OSBPL2|9885|oxysterol binding protein-like 2##AK315576|OSBPL2|9885|oxysterol binding protein-like 2##NM_014835|OSBPL2|9885|oxysterol binding protein-like 2##NM_144498|OSBPL2|9885|oxysterol binding protein-like 2##AK291851|OSBPL2|9885|oxysterol binding protein-like 2##AK307459|ADRM1|11047|adhesion regulating molecule 1##NM_007002|ADRM1|11047|adhesion regulating molecule 1##NM_175573|ADRM1|11047|adhesion regulating molecule 1##BC017245|ADRM1|11047|adhesion regulating molecule 1##BC093021|ADRM1|11047|adhesion regulating molecule 1##BC003059|ADRM1|11047|adhesion regulating molecule 1##AK297567|ADRM1|11047|adhesion regulating molecule 1##D64154|ADRM1|11047|adhesion regulating molecule 1	0.461556	CTCF.p2:5:0.462
chr22	33396808	33396918	reg1018783.p1	7.458	+	BC014277 TSC_hg19_v1_chr22_+_33197759	-199111	+	TSC_hg19_v1_chr22_+_33197690 AK311702 AK314871 AK298126 BC013086 U14394 AX801509 U02571 S78453 U67195	-199169	+	NM_000362	-200062	+	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	5863	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	57492	-	AJ007583 AB011181 NM_004737 NM_133642	919507	-	BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK314871|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK298126|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC013086|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U14394|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U02571|TIMP3|7078|TIMP metallopeptidase inhibitor 3##S78453|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U67195|TIMP3|7078|TIMP metallopeptidase inhibitor 3##NM_000362|TIMP3|7078|TIMP metallopeptidase inhibitor 3##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase	0.998818	CTCF.p2:2:0.999
chr2	31749079	31749188	reg1017488.p2	7.458	+	TSC_hg19_v1_chr2_-_31637599 NM_000379	-111522	-	TSC_hg19_v1_chr2_-_31637569 U39487 D11456 U06117	-111562	-	AK294222 TSC_hg19_v1_chr2_+_31456985	-292150	+	EU832809 GQ129244 HQ258121 M74047 EF560740 AK316597 BC112252 BC113641 NM_000348	56870	-	TSC_hg19_v1_chr2_-_32235713 AF363446 BC018733 NM_001137602 NM_015955	486525	-	TSC_hg19_v1_chr2_-_32235732 AB041018	486595	-	NM_000379|XDH|7498|xanthine dehydrogenase##U39487|XDH|7498|xanthine dehydrogenase##D11456|XDH|7498|xanthine dehydrogenase##U06117|XDH|7498|xanthine dehydrogenase##AK294222|EHD3|30845|EH-domain containing 3##EU832809|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##GQ129244|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##HQ258121|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##M74047|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##EF560740|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##AK316597|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC112252|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC113641|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000348|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##AF363446|MEMO1|51072|mediator of cell motility 1##BC018733|MEMO1|51072|mediator of cell motility 1##NM_001137602|MEMO1|51072|mediator of cell motility 1##NM_015955|MEMO1|51072|mediator of cell motility 1##AB041018|MEMO1|51072|mediator of cell motility 1	0.994205	CTCF.p2:0:0.994
chr7	48339348	48339457	reg1018276.p1	7.458	+	AK126220 AY204751 BX647273 NM_152701	-128347	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-210447	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	-210602	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	1473868	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	1793422	-	NM_001161834	1796279	+	AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72	0.756284	CTCF.p2:-33:0.756
chr15	83007454	83007592	reg1016131.p2	7.457	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-62633	+	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	-62731	+	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	-182630	-	CR936602 NM_001164465	10655	-	NM_198181 CR936812	91218	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	201713	-	BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17	0.919612	CTCF.p2:15:0.920
chr20	48100820	48100943	reg1017346.p1	7.457	+	BC110572 BC110573 NM_004975	-1702	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-205686	+	TSC_hg19_v1_chr20_+_47895176 BC042807 CR936805	-205709	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	83808	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	229349	-	AB004550 TSC_hg19_v1_chr20_-_48330359	229475	-	BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC042807|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##CR936805|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.861326	CTCF.p2:-12:0.861
chr2	166984547	166984673	reg1017500.p2	7.457	+	AB093548 AB093549 AB098335 AY043484 AF225985 NM_001165963 NM_001165964 NM_006920 EU368119	-54456	-	AB073395 TSC_hg19_v1_chr2_-_166810287 AK057268 AK292942 BC055424 NM_024753	-174309	-	TSC_hg19_v1_chr2_-_166650773 NM_004482	-333824	-	EU368117 NM_001202435 DQ993522	21103	-	TSC_hg19_v1_chr2_-_167232465 AK307549 NM_002977	247870	-	BC141864 M91556 NM_002976	358868	-	AB093548|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB093549|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB098335|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AY043484|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AF225985|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001165963|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001165964|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_006920|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##EU368119|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB073395|TTC21B|79809|tetratricopeptide repeat domain 21B##AK057268|TTC21B|79809|tetratricopeptide repeat domain 21B##AK292942|TTC21B|79809|tetratricopeptide repeat domain 21B##BC055424|TTC21B|79809|tetratricopeptide repeat domain 21B##NM_024753|TTC21B|79809|tetratricopeptide repeat domain 21B##NM_004482|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##EU368117|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001202435|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AK307549|SCN9A|6335|sodium channel, voltage-gated, type IX, alpha subunit##NM_002977|SCN9A|6335|sodium channel, voltage-gated, type IX, alpha subunit##BC141864|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##M91556|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##NM_002976|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha	0.996738	CTCF.p2:0:0.997
chr7	94829219	94829354	reg1020397.p1	7.457	+	NM_001166161 NM_001166162 NM_001166163	-290077	+	TSC_hg19_v1_chr7_+_94536986 NM_001166160 NM_017650 AK096514 BC150636	-292320	+	TSC_hg19_v1_chr7_+_94297448 AF038197	-531834	+	M63013 AB528644 M63012 S64615 TSC_hg19_v1_chr7_-_94953802 AK314027 BC074719	124488	-	TSC_hg19_v1_chr7_-_94953845 D84371 U53784 Z70723 NM_000446	124569	-	L48516 AF320003 AF329433 CU687094 TSC_hg19_v1_chr7_-_95025687 AK301772 BC070374 AK304282 NM_000940	196370	-	NM_001166161|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166162|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166163|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166160|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_017650|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##AK096514|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##BC150636|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##AF038197|PEG10|23089|paternally expressed 10##M63013|PON1|5444|paraoxonase 1##M63012|PON1|5444|paraoxonase 1##S64615|PON1|5444|paraoxonase 1##AK314027|PON1|5444|paraoxonase 1##BC074719|PON1|5444|paraoxonase 1##D84371|PON1|5444|paraoxonase 1##U53784|PON1|5444|paraoxonase 1##Z70723|PON1|5444|paraoxonase 1##NM_000446|PON1|5444|paraoxonase 1##L48516|PON3|5446|paraoxonase 3##AF320003|PON3|5446|paraoxonase 3##AF329433|PON3|5446|paraoxonase 3##BC070374|PON3|5446|paraoxonase 3##AK304282|PON3|5446|paraoxonase 3##NM_000940|PON3|5446|paraoxonase 3	0.252696	CTCF.p2:8:0.253
chr15	83108924	83109035	reg1015981.p1	7.456	+	NM_198181 CR936812	-10238	+	CR936602 NM_001164465	-90801	-	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-164089	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	100257	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	131556	-	CU690752 BC050629 NM_030594	207695	-	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	0.919617	CTCF.p2:-9:0.920
chr20	55975537	55975652	reg1018183.p3	7.456	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-9137	+	NM_001190472	-40717	-	AK292247 AY349350 NM_001015885	-48993	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	124607	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	160563	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	219944	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.462715	CTCF.p2:-8:0.463
chr3	4332111	4332215	reg1017156.p2	7.456	+	TSC_hg19_v1_chr3_+_3841114 NM_020873	-491064	+	TSC_hg19_v1_chr3_-_3221401 NM_001173482 NM_016302	-1110762	-	TSC_hg19_v1_chr3_-_3221386 AK301423	-1110777	-	AK307537 NM_001243723 NM_006515 TSC_hg19_v1_chr3_+_4345015	12845	+	TSC_hg19_v1_chr3_+_4345048 AK222734 AK297865 AK302296 AB590082 AF054989 BC011635 BC008931 U80776 AY952295 CU679994	12900	+	AY208752 AY323910 AK057983 TSC_hg19_v1_chr3_-_4508936 AK302018 AB448737 BC110862	176769	-	NM_020873|LRRN1|57633|leucine rich repeat neuronal 1##NM_001173482|CRBN|51185|cereblon##NM_016302|CRBN|51185|cereblon##AK301423|CRBN|51185|cereblon##AK307537|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_001243723|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_006515|SETMAR|6419|SET domain and mariner transposase fusion gene##AK222734|SETMAR|6419|SET domain and mariner transposase fusion gene##AK297865|SETMAR|6419|SET domain and mariner transposase fusion gene##AK302296|SETMAR|6419|SET domain and mariner transposase fusion gene##AF054989|SETMAR|6419|SET domain and mariner transposase fusion gene##BC011635|SETMAR|6419|SET domain and mariner transposase fusion gene##BC008931|SETMAR|6419|SET domain and mariner transposase fusion gene##U80776|SETMAR|6419|SET domain and mariner transposase fusion gene##AY952295|SETMAR|6419|SET domain and mariner transposase fusion gene##AY208752|SUMF1|285362|sulfatase modifying factor 1##AY323910|SUMF1|285362|sulfatase modifying factor 1##AK057983|SUMF1|285362|sulfatase modifying factor 1##AK302018|SUMF1|285362|sulfatase modifying factor 1##AB448737|SUMF1|285362|sulfatase modifying factor 1##BC110862|SUMF1|285362|sulfatase modifying factor 1	0.12599	
chr13	23662150	23662286	reg1021079.p1	7.455	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-1417070	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-1483858	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-1483909	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	92897	+	TSC_hg19_v1_chr13_-_23949652 AK125458	287432	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	345622	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.0	
chr5	142609856	142610036	reg1016182.p3	7.455	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-459638	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-459974	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-532375	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	172877	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	173160	-	BC015610 TSC_hg19_v1_chr5_-_142783214	173265	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr9	94444127	94444237	reg1018066.p2	7.455	+	TSC_hg19_v1_chr9_-_94186159 NM_005384	-258000	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	-258138	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	-319983	-	TSC_hg19_v1_chr9_-_94711095 BC033697	266946	-	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	268207	-	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	433482	-	NM_005384|NFIL3|4783|nuclear factor, interleukin 3 regulated##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1	0.360375	CTCF.p2:9:0.360
chr19	10931003	10931115	reg1017415.p2	7.453	+	TSC_hg19_v1_chr19_+_10828827 BC039596 AK289831	-102200	+	TSC_hg19_v1_chr19_+_10828773 L36983	-102287	+	TSC_hg19_v1_chr19_+_10828765 BC054501	-102292	+	AB528501 DQ892640 DQ895878 BC002443 BC018831 TSC_hg19_v1_chr19_-_10946889 U41804 NM_006858	15865	-	BC157863 NM_001136482	28046	+	TSC_hg19_v1_chr19_+_10982255 NM_199141	51191	+	BC039596|DNM2|1785|dynamin 2##AK289831|DNM2|1785|dynamin 2##L36983|DNM2|1785|dynamin 2##BC054501|DNM2|1785|dynamin 2##DQ892640|TMED1|11018|transmembrane emp24 protein transport domain containing 1##DQ895878|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC002443|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC018831|TMED1|11018|transmembrane emp24 protein transport domain containing 1##U41804|TMED1|11018|transmembrane emp24 protein transport domain containing 1##NM_006858|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC157863|C19orf38|255809|chromosome 19 open reading frame 38##NM_001136482|C19orf38|255809|chromosome 19 open reading frame 38##NM_199141|CARM1|10498|coactivator-associated arginine methyltransferase 1	0.843602	CTCF.p2:7:0.844
chr5	60179195	60179295	reg1017230.p1	7.453	+	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	-39174	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	-183280	-	TSC_hg19_v1_chr5_-_59995928 AF490257	-183329	-	AB527753 BT020021 CR536563 TSC_hg19_v1_chr5_-_60240898 U28413 AK056931 AK304610 AK314511 BC009793 AK290726 AK294856 NM_000082	61625	-	TSC_hg19_v1_chr5_+_60241003 AK026051 NM_174889 AF087990 AK291296 BC001753 BC070357 BC033965 AB183433	61767	+	BC146876 BC146881 BC014242 BC047489 TSC_hg19_v1_chr5_-_60458209	278933	-	AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AF490257|DEPDC1B|55789|DEP domain containing 1B##BT020021|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##CR536563|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##U28413|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK056931|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK304610|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK314511|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##BC009793|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK290726|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK294856|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##NM_000082|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK026051|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_174889|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AF087990|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AK291296|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC001753|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC070357|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC033965|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AB183433|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC146876|C5orf43|643155|chromosome 5 open reading frame 43##BC146881|C5orf43|643155|chromosome 5 open reading frame 43##BC014242|C5orf43|643155|chromosome 5 open reading frame 43##BC047489|C5orf43|643155|chromosome 5 open reading frame 43	0.1963	
chrX	115064510	115064623	reg1017757.p1	7.453	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-236698	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-267524	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-268960	+	BC003645 TSC_hg19_v1_chrX_-_115085443	20873	-	AK313927 NM_000686 X87723 U16957	237429	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	503201	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.485415	CTCF.p2:17:0.485
chrX	119014935	119015053	reg1017124.p2	7.453	+	TSC_hg19_v1_chrX_+_119005794 BC000266 U54993 X81900 AB451304 AB451435 CR456889	-9163	+	NM_004541 TSC_hg19_v1_chrX_+_119005781	-9235	+	AB464688 BT007175 CU676558 BC000832 TSC_hg19_v1_chrX_-_119005683 BC128440 BC020556 AK314778 X98253 NM_006978	-9312	-	BC066357 NM_001008534 NM_001008535 NM_178813	14873	+	CU677277 CU689374 BC032442 BC015354 BC016783 BC000940 BC012770 TSC_hg19_v1_chrX_-_119077709 BC018968 BC071686 AL832118 AK026279 AY388958 NM_024528	62679	-	AB464156 DQ890992 DQ894169 BC021719 AK058125 AL590524 AF317219 AL590526 NM_001099685 NM_032498	196617	-	BC000266|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##U54993|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##X81900|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##AB451304|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##AB451435|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##CR456889|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##NM_004541|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##BT007175|RNF113A|7737|ring finger protein 113A##BC000832|RNF113A|7737|ring finger protein 113A##BC020556|RNF113A|7737|ring finger protein 113A##AK314778|RNF113A|7737|ring finger protein 113A##X98253|RNF113A|7737|ring finger protein 113A##NM_006978|RNF113A|7737|ring finger protein 113A##BC066357|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_001008534|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_001008535|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_178813|AKAP14|158798|A kinase (PRKA) anchor protein 14##BC032442|NKAP|79576|NFKB activating protein##BC015354|NKAP|79576|NFKB activating protein##BC016783|NKAP|79576|NFKB activating protein##BC000940|NKAP|79576|NFKB activating protein##BC012770|NKAP|79576|NFKB activating protein##BC018968|NKAP|79576|NFKB activating protein##BC071686|NKAP|79576|NFKB activating protein##AL832118|NKAP|79576|NFKB activating protein##AK026279|NKAP|79576|NFKB activating protein##AY388958|NKAP|79576|NFKB activating protein##NM_024528|NKAP|79576|NFKB activating protein##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2	0.971209	CTCF.p2:0:0.971
chr1	175793458	175793584	reg1019212.p1	7.452	+	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	-80811	-	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-631491	-	AK127044 NM_022093	-756528	+	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	382644	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	382797	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	382848	-	AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2	0.780429	CTCF.p2:14:0.780
chr15	82232044	82232186	reg1017687.p1	7.452	+	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	-565630	-	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	-615621	-	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	-642811	+	AK094145 TSC_hg19_v1_chr15_-_82336883	104768	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	106251	-	AB095929 BC111545 BC036211 TSC_hg19_v1_chr15_-_82338485	106361	-	NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3##AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)##AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)##BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)##BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)	0.999344	CTCF.p2:10:0.999
chr22	42142702	42142830	reg1018209.p1	7.452	+	BC025400 NM_152513 BC035720 BC144638	-47254	+	BC035403 NM_001142964 AK131457	-56208	+	AK124020 TSC_hg19_v1_chr22_-_42084824 BC005358 AF155235 NM_001003796	-57901	-	TSC_hg19_v1_chr22_+_42196682 NM_024821 AK026002 AK299311 BC017693 CR456484	53906	+	NM_004599 TSC_hg19_v1_chr22_+_42229105	86339	+	TSC_hg19_v1_chr22_+_42229114 BC051799	86346	+	BC025400|MEI1|150365|meiosis inhibitor 1##NM_152513|MEI1|150365|meiosis inhibitor 1##BC035720|MEI1|150365|meiosis inhibitor 1##BC144638|MEI1|150365|meiosis inhibitor 1##BC035403|C22orf46|79640|chromosome 22 open reading frame 46##NM_001142964|C22orf46|79640|chromosome 22 open reading frame 46##AK131457|C22orf46|79640|chromosome 22 open reading frame 46##BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_024821|CCDC134|79879|coiled-coil domain containing 134##AK026002|CCDC134|79879|coiled-coil domain containing 134##AK299311|CCDC134|79879|coiled-coil domain containing 134##BC017693|CCDC134|79879|coiled-coil domain containing 134##CR456484|CCDC134|79879|coiled-coil domain containing 134##NM_004599|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051799|SREBF2|6721|sterol regulatory element binding transcription factor 2	0.978489	CTCF.p2:-11:0.978
chr1	45265481	45265586	reg1017789.p1	7.451	+	AF440757 AY515707 BC101823 NM_153274	-12133	-	AK311854 D28361 NM_001012 BC022070 BC070875	-24282	+	TSC_hg19_v1_chr1_+_45205568 AK290688 AB590244 BT006759 CR450302 CU677119 CU679091 DQ893800 EU176178	-59952	+	AJ293866 TSC_hg19_v1_chr1_+_45266017	423	+	BC013899 NM_004073 TSC_hg19_v1_chr1_+_45266045	508	+	TSC_hg19_v1_chr1_+_45266048 AB209875 EU832631 EU832706 BC004135 BC004198 BC013960 U56998	599	+	AF440757|BEST4|266675|bestrophin 4##AY515707|BEST4|266675|bestrophin 4##BC101823|BEST4|266675|bestrophin 4##NM_153274|BEST4|266675|bestrophin 4##AK311854|RPS8|6202|ribosomal protein S8##NM_001012|RPS8|6202|ribosomal protein S8##BC022070|RPS8|6202|ribosomal protein S8##BC070875|RPS8|6202|ribosomal protein S8##AK290688|KIF2C|11004|kinesin family member 2C##BT006759|KIF2C|11004|kinesin family member 2C##CR450302|KIF2C|11004|kinesin family member 2C##DQ893800|KIF2C|11004|kinesin family member 2C##EU176178|KIF2C|11004|kinesin family member 2C##AJ293866|PLK3|1263|polo-like kinase 3##BC013899|PLK3|1263|polo-like kinase 3##NM_004073|PLK3|1263|polo-like kinase 3##AB209875|PLK3|1263|polo-like kinase 3##EU832631|PLK3|1263|polo-like kinase 3##EU832706|PLK3|1263|polo-like kinase 3##BC004135|PLK3|1263|polo-like kinase 3##BC004198|PLK3|1263|polo-like kinase 3##BC013960|PLK3|1263|polo-like kinase 3##U56998|PLK3|1263|polo-like kinase 3	0.197329	
chr16	22207341	22207490	reg1017438.p2	7.451	+	AK098260 AK128606 AK307544 NM_173615	-103554	+	TSC_hg19_v1_chr16_+_22019464 NM_001164579 BC027604 BC053950	-187927	+	BC039562 BC021724 BC028605 NM_173806	-194987	-	TSC_hg19_v1_chr16_+_22217630 NM_013302 AK308757 BC032665	10258	+	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	101333	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	178380	-	AK098260|VWA3A|146177|von Willebrand factor A domain containing 3A##AK128606|VWA3A|146177|von Willebrand factor A domain containing 3A##AK307544|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_173615|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_001164579|C16orf52|730094|chromosome 16 open reading frame 52##BC027604|C16orf52|730094|chromosome 16 open reading frame 52##BC053950|C16orf52|730094|chromosome 16 open reading frame 52##BC039562|PDZD9|255762|PDZ domain containing 9##BC021724|PDZD9|255762|PDZ domain containing 9##BC028605|PDZD9|255762|PDZ domain containing 9##NM_173806|PDZD9|255762|PDZ domain containing 9##NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase##BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	0.0	
chr19	12996385	12996518	reg1019052.p2	7.451	+	AK075449 TSC_hg19_v1_chr19_-_12992251 AF047016 AB004574 AK297493 AF045937 AK315358 BC065209 AF060222 AK311145 NM_001375	-4160	-	FJ752529 BT007047 BC010419 TSC_hg19_v1_chr19_-_12992222	-4264	-	NM_014975 TSC_hg19_v1_chr19_+_12949305 AB023190 AK297553 AB384551	-47130	+	AB463820 BC033580 BC040000 U65404 NM_006563	1535	-	TSC_hg19_v1_chr19_+_13001973 AK098370 AK290407 AK298772 NM_000159 NM_013976 AK296446 BC002579 AK300841 AK309892 U69141 CU678052 BT006706 S77773	5613	+	TSC_hg19_v1_chr19_-_13030085 AK302373 NM_001105578	33633	-	AK075449|DNASE2|1777|deoxyribonuclease II, lysosomal##AF047016|DNASE2|1777|deoxyribonuclease II, lysosomal##AB004574|DNASE2|1777|deoxyribonuclease II, lysosomal##AK297493|DNASE2|1777|deoxyribonuclease II, lysosomal##AF045937|DNASE2|1777|deoxyribonuclease II, lysosomal##AK315358|DNASE2|1777|deoxyribonuclease II, lysosomal##BC065209|DNASE2|1777|deoxyribonuclease II, lysosomal##AF060222|DNASE2|1777|deoxyribonuclease II, lysosomal##AK311145|DNASE2|1777|deoxyribonuclease II, lysosomal##NM_001375|DNASE2|1777|deoxyribonuclease II, lysosomal##FJ752529|DNASE2|1777|deoxyribonuclease II, lysosomal##BT007047|DNASE2|1777|deoxyribonuclease II, lysosomal##BC010419|DNASE2|1777|deoxyribonuclease II, lysosomal##NM_014975|MAST1|22983|microtubule associated serine/threonine kinase 1##AB023190|MAST1|22983|microtubule associated serine/threonine kinase 1##AK297553|MAST1|22983|microtubule associated serine/threonine kinase 1##BC033580|KLF1|10661|Kruppel-like factor 1 (erythroid)##BC040000|KLF1|10661|Kruppel-like factor 1 (erythroid)##U65404|KLF1|10661|Kruppel-like factor 1 (erythroid)##NM_006563|KLF1|10661|Kruppel-like factor 1 (erythroid)##AK098370|GCDH|2639|glutaryl-CoA dehydrogenase##AK290407|GCDH|2639|glutaryl-CoA dehydrogenase##AK298772|GCDH|2639|glutaryl-CoA dehydrogenase##NM_000159|GCDH|2639|glutaryl-CoA dehydrogenase##NM_013976|GCDH|2639|glutaryl-CoA dehydrogenase##AK296446|GCDH|2639|glutaryl-CoA dehydrogenase##BC002579|GCDH|2639|glutaryl-CoA dehydrogenase##AK300841|GCDH|2639|glutaryl-CoA dehydrogenase##AK309892|GCDH|2639|glutaryl-CoA dehydrogenase##U69141|GCDH|2639|glutaryl-CoA dehydrogenase##BT006706|GCDH|2639|glutaryl-CoA dehydrogenase##S77773|GCDH|2639|glutaryl-CoA dehydrogenase##AK302373|SYCE2|256126|synaptonemal complex central element protein 2##NM_001105578|SYCE2|256126|synaptonemal complex central element protein 2	0.829071	CTCF.p2:4:0.829
chr3	674409	674527	reg1018540.p2	7.451	+	AK126307 TSC_hg19_v1_chr3_+_577916	-96553	+	NM_001253388 BC104918 BC143496 BC143498 AB384920	-313056	+	TSC_hg19_v1_chr3_+_239671 AK055236	-434797	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	460195	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	1466093	+	NM_001206955	1606044	+	NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK055236|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4	0.986977	CTCF.p2:-9:0.987
chr4	11807620	11807756	reg1018104.p1	7.451	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-377156	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-1121287	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-1348678	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	1678263	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	1678287	-	AB463932 AF009801 EU446467 BC111966 NM_001189	1738387	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.8133	CTCF.p2:-5:0.813
chr8	8800259	8800371	reg1017556.p1	7.451	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	-49377	-	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	-240617	+	AK122582 NM_001080826	-561093	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	60050	+	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	60190	+	TSC_hg19_v1_chr8_-_9008167 BC043388 AK024067 NM_024607	207863	-	NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1##BC043388|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK024067|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_024607|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B	0.0	
chr10	4809371	4809499	reg1021680.p1	7.450	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-981926	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-982124	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-1594430	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	58983	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	196079	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	196188	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.978458	CTCF.p2:-2:0.978
chr12	49725536	49725671	reg1019921.p1	7.450	+	NM_001100620 NM_005480 TSC_hg19_v1_chr12_+_49717037 AK315211 AK296811 AK309716 AK310709 AK299302 BC032583 BC018627 BC011597	-8567	+	NM_006262 TSC_hg19_v1_chr12_+_49688929 BC032703 AB528454 CU689492 DQ893358 DQ896677	-36658	+	TSC_hg19_v1_chr12_+_49658867 BC011790 BC004949 BC033064 BC051297 BC019298 BC021088	-66719	+	BC110812 AF466366 NM_001008223	5360	-	TSC_hg19_v1_chr12_+_49740718 AK055747	15100	+	BC033236 NM_024902	15437	+	NM_001100620|TROAP|10024|trophinin associated protein (tastin)##NM_005480|TROAP|10024|trophinin associated protein (tastin)##AK315211|TROAP|10024|trophinin associated protein (tastin)##AK296811|TROAP|10024|trophinin associated protein (tastin)##AK309716|TROAP|10024|trophinin associated protein (tastin)##AK310709|TROAP|10024|trophinin associated protein (tastin)##AK299302|TROAP|10024|trophinin associated protein (tastin)##BC032583|TROAP|10024|trophinin associated protein (tastin)##BC018627|TROAP|10024|trophinin associated protein (tastin)##BC011597|TROAP|10024|trophinin associated protein (tastin)##NM_006262|PRPH|5630|peripherin##BC032703|PRPH|5630|peripherin##DQ893358|PRPH|5630|peripherin##DQ896677|PRPH|5630|peripherin##BC011790|TUBA1C|84790|tubulin, alpha 1c##BC004949|TUBA1C|84790|tubulin, alpha 1c##BC033064|TUBA1C|84790|tubulin, alpha 1c##BC051297|TUBA1C|84790|tubulin, alpha 1c##BC019298|TUBA1C|84790|tubulin, alpha 1c##BC021088|TUBA1C|84790|tubulin, alpha 1c##BC110812|C1QL4|338761|complement component 1, q subcomponent-like 4##AF466366|C1QL4|338761|complement component 1, q subcomponent-like 4##NM_001008223|C1QL4|338761|complement component 1, q subcomponent-like 4##AK055747|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22	0.867574	CTCF.p2:-24:0.868
chr15	64303063	64303199	reg1015417.p3	7.450	+	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-176991	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-177011	-	TSC_hg19_v1_chr15_-_64126081 U50078	-177047	-	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	35479	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	82966	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	85009	+	AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1	0.0	
chr15	72892356	72892473	reg1017887.p2	7.450	+	TSC_hg19_v1_chr15_+_72766706 AB209432 BC051877	-125698	+	TSC_hg19_v1_chr15_+_72766670 AJ243190 NM_005744 AK312715	-125747	+	AK131033 NM_001080462	-201754	+	NM_018652	54623	+	NM_001252678 NM_033028 TSC_hg19_v1_chr15_+_72978547 AK303706 AF359281 AK298922 AK314507 BX647855 BC027624 AK075321 AK302224 AB528022 DQ891519 DQ894709	86129	+	BC037410 TSC_hg19_v1_chr15_-_73051778	159300	-	AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##AK131033|TMEM202|338949|transmembrane protein 202##NM_001080462|TMEM202|338949|transmembrane protein 202##NM_018652|GOLGA6B|55889|golgin A6 family, member B##NM_001252678|BBS4|585|Bardet-Biedl syndrome 4##NM_033028|BBS4|585|Bardet-Biedl syndrome 4##AK303706|BBS4|585|Bardet-Biedl syndrome 4##AF359281|BBS4|585|Bardet-Biedl syndrome 4##AK298922|BBS4|585|Bardet-Biedl syndrome 4##AK314507|BBS4|585|Bardet-Biedl syndrome 4##BX647855|BBS4|585|Bardet-Biedl syndrome 4##BC027624|BBS4|585|Bardet-Biedl syndrome 4##AK075321|BBS4|585|Bardet-Biedl syndrome 4##AK302224|BBS4|585|Bardet-Biedl syndrome 4##DQ891519|BBS4|585|Bardet-Biedl syndrome 4##DQ894709|BBS4|585|Bardet-Biedl syndrome 4	0.996933	CTCF.p2:-16:0.997
chr16	84122426	84122552	reg1018674.p1	7.450	+	NM_001080442	-46728	-	TSC_hg19_v1_chr16_+_84002230 AY299331 NM_019065 BC131615 AK127376	-120277	+	NM_182981 TSC_hg19_v1_chr16_+_83986844 AK290383 AY258068 AY037158 BC020434 BC032476 BC093687 BC113417	-135605	+	TSC_hg19_v1_chr16_-_84150441 AK291773 BC114555 BC114961 AK299067	27923	-	TSC_hg19_v1_chr16_-_84150449 BC026330 D42053 NM_003791	28027	-	TSC_hg19_v1_chr16_+_84150646 BC052334	28162	+	NM_001080442|SLC38A8|146167|solute carrier family 38, member 8##AY299331|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_019065|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##BC131615|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##AK127376|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_182981|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK290383|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY258068|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY037158|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC020434|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC032476|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC093687|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC113417|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK291773|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114555|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114961|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##AK299067|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC026330|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##D42053|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##NM_003791|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC052334|LOC729887|729887|uncharacterized LOC729887	0.24338	
chr2	2848080	2848225	reg1020015.p1	7.449	+	TSC_hg19_v1_chr2_-_2335085 AK307797	-513068	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	-513187	-	BC031690 TSC_hg19_v1_chr2_-_1946938	-901246	-	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	533404	-	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	535353	+	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	675146	-	AK307797|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1	0.989426	CTCF.p2:-27:0.989
chr7	26721560	26721667	reg1017733.p1	7.449	+	AK093321 AX748054 NM_001145531	-44124	+	TSC_hg19_v1_chr7_+_26438248 AK056484	-283351	+	AK309162 NM_001199838	-317669	+	AF072166 AJ004886 AB528968 DQ892896 DQ896144 AB014486 TSC_hg19_v1_chr7_-_26904210 BC002893 AK222885 AK313209 BC036044 AF051323 NM_003930	182580	-	S79869 S79871 S79910 U37431 AB464569 CU689416 DQ890884 DQ894038 U10421 AK308067 BC032547 AK313514 NM_005522 NM_153620	413961	-	TSC_hg19_v1_chr7_+_27135786 BC031342	414172	+	AK093321|C7orf71|285941|chromosome 7 open reading frame 71##NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71##AK056484|LOC441204|441204|uncharacterized LOC441204##AK309162|SNX10|29887|sorting nexin 10##NM_001199838|SNX10|29887|sorting nexin 10##AF072166|SKAP2|8935|src kinase associated phosphoprotein 2##AJ004886|SKAP2|8935|src kinase associated phosphoprotein 2##DQ892896|SKAP2|8935|src kinase associated phosphoprotein 2##DQ896144|SKAP2|8935|src kinase associated phosphoprotein 2##AB014486|SKAP2|8935|src kinase associated phosphoprotein 2##BC002893|SKAP2|8935|src kinase associated phosphoprotein 2##AK222885|SKAP2|8935|src kinase associated phosphoprotein 2##AK313209|SKAP2|8935|src kinase associated phosphoprotein 2##BC036044|SKAP2|8935|src kinase associated phosphoprotein 2##AF051323|SKAP2|8935|src kinase associated phosphoprotein 2##NM_003930|SKAP2|8935|src kinase associated phosphoprotein 2##S79869|HOXA1|3198|homeobox A1##S79871|HOXA1|3198|homeobox A1##S79910|HOXA1|3198|homeobox A1##U37431|HOXA1|3198|homeobox A1##DQ890884|HOXA1|3198|homeobox A1##DQ894038|HOXA1|3198|homeobox A1##U10421|HOXA1|3198|homeobox A1##AK308067|HOXA1|3198|homeobox A1##BC032547|HOXA1|3198|homeobox A1##AK313514|HOXA1|3198|homeobox A1##NM_005522|HOXA1|3198|homeobox A1##NM_153620|HOXA1|3198|homeobox A1##BC031342|HOTAIRM1|100506311|HOXA transcript antisense RNA, myeloid-specific 1 (non-protein coding)	0.911689	CTCF.p2:5:0.912
chr1	47728607	47728742	reg1019164.p2	7.448	+	M61108 NM_003189	-33232	-	TSC_hg19_v1_chr1_-_47655728 NM_005764	-72928	-	CR450304 CU680280 BC012303 TSC_hg19_v1_chr1_-_47655693	-73026	-	TSC_hg19_v1_chr1_-_47779820 DQ358744 AK307519 BC053615 CR749851 M74558 NM_001048166 NM_003035	51111	-	TSC_hg19_v1_chr1_+_47799474 NM_001136140 NM_016308	70791	+	TSC_hg19_v1_chr1_+_47799615 BC017806 AF087865 AF112216 AF110643 AK223014 AK294294 AK298502 AF070416 AK025258 AK293238 AK312693 BC014961 AB528698 DQ892213 DQ895408 DQ895409	70878	+	M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1##NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1##NM_005764|PDZK1IP1|10158|PDZK1 interacting protein 1##CR450304|PDZK1IP1|10158|PDZK1 interacting protein 1##BC012303|PDZK1IP1|10158|PDZK1 interacting protein 1##AK307519|STIL|6491|SCL/TAL1 interrupting locus##BC053615|STIL|6491|SCL/TAL1 interrupting locus##CR749851|STIL|6491|SCL/TAL1 interrupting locus##M74558|STIL|6491|SCL/TAL1 interrupting locus##NM_001048166|STIL|6491|SCL/TAL1 interrupting locus##NM_003035|STIL|6491|SCL/TAL1 interrupting locus##NM_001136140|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##NM_016308|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##BC017806|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF087865|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF112216|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF110643|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK223014|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK294294|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK298502|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF070416|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK025258|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK293238|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK312693|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##BC014961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##DQ892213|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##DQ895408|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##DQ895409|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic	0.782599	CTCF.p2:11:0.783
chr4	85425152	85425248	reg1016372.p2	7.447	+	NM_006168	-5814	-	TSC_hg19_v1_chr4_+_84457420 DQ345298 BC090956 AY358100 NM_032717 DQ324782	-967619	+	TSC_hg19_v1_chr4_+_84457260 AK055749 AK223543	-967928	+	NM_001263 U65887	78893	+	NM_014991	462343	-	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	971143	+	NM_006168|NKX6-1|4825|NK6 homeobox 1##DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK055749|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK223543|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24	0.994077	CTCF.p2:-6:0.994
chr5	142344968	142345072	reg1018648.p1	7.447	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-194712	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-195048	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-267449	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	437803	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	438086	-	BC015610 TSC_hg19_v1_chr5_-_142783214	438191	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.830069	CTCF.p2:18:0.830
chrX	53509184	53509323	reg1022430.p1	7.447	+	CR456723 TSC_hg19_v1_chrX_-_53461318 AF069134 BC008708 BC000372 BC000829 U73514 AF035555 U96132 NM_001037811 NM_004493	-47947	-	AK304179 AK057345 NM_144968 AK292871 TSC_hg19_v1_chrX_+_53449863 AK290346 BC036767 NM_001031745	-59407	+	TSC_hg19_v1_chrX_-_53449614 BC080185 BC112127 BC171726 NM_006306 AK291921	-59609	-	TSC_hg19_v1_chrX_-_53629608 AB071605	120361	-	TSC_hg19_v1_chrX_-_53713665 BC018750 BC038184 DQ097177 NM_031407 AK056671	204424	-	BC042108 NM_001184898	560356	-	CR456723|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AF069134|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC008708|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC000372|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC000829|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##U73514|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AF035555|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##U96132|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##NM_001037811|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##NM_004493|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AK304179|RIBC1|158787|RIB43A domain with coiled-coils 1##AK057345|RIBC1|158787|RIB43A domain with coiled-coils 1##NM_144968|RIBC1|158787|RIB43A domain with coiled-coils 1##AK292871|RIBC1|158787|RIB43A domain with coiled-coils 1##AK290346|RIBC1|158787|RIB43A domain with coiled-coils 1##BC036767|RIBC1|158787|RIB43A domain with coiled-coils 1##NM_001031745|RIBC1|158787|RIB43A domain with coiled-coils 1##BC080185|SMC1A|8243|structural maintenance of chromosomes 1A##BC112127|SMC1A|8243|structural maintenance of chromosomes 1A##BC171726|SMC1A|8243|structural maintenance of chromosomes 1A##NM_006306|SMC1A|8243|structural maintenance of chromosomes 1A##AK291921|SMC1A|8243|structural maintenance of chromosomes 1A##AB071605|HUWE1|10075|HECT, UBA and WWE domain containing 1##BC018750|HUWE1|10075|HECT, UBA and WWE domain containing 1##BC038184|HUWE1|10075|HECT, UBA and WWE domain containing 1##DQ097177|HUWE1|10075|HECT, UBA and WWE domain containing 1##NM_031407|HUWE1|10075|HECT, UBA and WWE domain containing 1##AK056671|HUWE1|10075|HECT, UBA and WWE domain containing 1##BC042108|PHF8|23133|PHD finger protein 8##NM_001184898|PHF8|23133|PHD finger protein 8	0.999736	CTCF.p2:-6:1.000
chr10	98670412	98670523	reg1018092.p2	7.446	+	TSC_hg19_v1_chr10_+_98592758 NM_032440 AL834245 AB058698	-77739	+	TSC_hg19_v1_chr10_-_98592186 AB593180	-78267	-	TSC_hg19_v1_chr10_+_98592020 NM_001170765 NM_001170766 AL832106 AK308356 BC053359	-78414	+	AK126886 BC024315 NM_015652 CU692918	70600	+	AY029183 AB383997 TSC_hg19_v1_chr10_-_98945570	275007	-	TSC_hg19_v1_chr10_-_98945606 BC146851	275128	-	NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor##AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor##AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor##AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor##BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor##AK126886|C10orf12|26148|chromosome 10 open reading frame 12##BC024315|C10orf12|26148|chromosome 10 open reading frame 12##NM_015652|C10orf12|26148|chromosome 10 open reading frame 12##AY029183|SLIT1|6585|slit homolog 1 (Drosophila)##BC146851|SLIT1|6585|slit homolog 1 (Drosophila)	0.9836	CTCF.p2:-8:0.984
chr2	16706700	16706802	reg1016534.p1	7.445	+	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-624584	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-624756	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	-624978	-	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	140393	-	DQ860102 NM_001099218	992954	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	1015136	+	BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1	0.924219	CTCF.p2:-20:0.924
chr3	197186466	197186646	reg1018658.p1	7.445	+	BC140841 BC144651 TSC_hg19_v1_chr3_-_197025506 AK304280 NM_001098424 NM_001204386 NM_004087 U13896 U13897 AK310596	-161082	-	TSC_hg19_v1_chr3_-_197024987 BC015560 BC028486 AK310893	-161623	-	AK294855 NM_001204387 NM_001204388	-275555	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	96286	-	NM_203315 TSC_hg19_v1_chr3_-_197300209	113645	-	TSC_hg19_v1_chr3_-_197354756 BC067856 AK309924 BC094848 AK299863 BC080518 AK311713	168197	-	BC140841|DLG1|1739|discs, large homolog 1 (Drosophila)##BC144651|DLG1|1739|discs, large homolog 1 (Drosophila)##AK304280|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001098424|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204386|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_004087|DLG1|1739|discs, large homolog 1 (Drosophila)##U13896|DLG1|1739|discs, large homolog 1 (Drosophila)##U13897|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310596|DLG1|1739|discs, large homolog 1 (Drosophila)##BC015560|DLG1|1739|discs, large homolog 1 (Drosophila)##BC028486|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310893|DLG1|1739|discs, large homolog 1 (Drosophila)##AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203315|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC067856|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK309924|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC094848|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK299863|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC080518|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK311713|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene	0.0	
chr5	170911543	170911672	reg1022489.p1	7.445	+	BC006245 TSC_hg19_v1_chr5_+_170847089 AB007422 AB528345 AF211188 AM393798 BT019570 BT019571 DQ892736 DQ895983	-64476	+	AY358811 AF075292 NM_003862	-64945	+	AB042278 AB451236 AB451361 AB463949 BT007011 CU676967 CU677717 CU680364 CU692436 DQ892032 DQ895223 EF429251 X16934 TSC_hg19_v1_chr5_+_170815031	-96616	+	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	521921	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	522037	-	BC026213 NM_012300 NM_033644 NM_033645	522269	-	BC006245|FGF18|8817|fibroblast growth factor 18##AB007422|FGF18|8817|fibroblast growth factor 18##AF211188|FGF18|8817|fibroblast growth factor 18##AM393798|FGF18|8817|fibroblast growth factor 18##BT019570|FGF18|8817|fibroblast growth factor 18##BT019571|FGF18|8817|fibroblast growth factor 18##DQ892736|FGF18|8817|fibroblast growth factor 18##DQ895983|FGF18|8817|fibroblast growth factor 18##AY358811|FGF18|8817|fibroblast growth factor 18##AF075292|FGF18|8817|fibroblast growth factor 18##NM_003862|FGF18|8817|fibroblast growth factor 18##AB042278|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451236|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451361|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BT007011|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ892032|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ895223|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##EF429251|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##X16934|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11	0.9991	CTCF.p2:3:0.999
chr19	18272189	18272318	reg1019924.p1	7.444	+	TSC_hg19_v1_chr19_+_18264004 BC070082 NM_005027 BC090249	-8221	+	BC063240 TSC_hg19_v1_chr19_+_18263972	-8272	+	TSC_hg19_v1_chr19_+_18208608 AB527184 NM_015016 AB011133	-63644	+	NM_006332 TSC_hg19_v1_chr19_+_18284600 AB049659 AK291551	12338	+	TSC_hg19_v1_chr19_+_18284622 BC021136 BC031020 AF097362	12368	+	TSC_hg19_v1_chr19_+_18284633 AB590284 CU676848 CU689078 DQ884410 DQ892016 DQ895206	12388	+	BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_015016|MAST3|23031|microtubule associated serine/threonine kinase 3##AB011133|MAST3|23031|microtubule associated serine/threonine kinase 3##NM_006332|IFI30|10437|interferon, gamma-inducible protein 30##AB049659|IFI30|10437|interferon, gamma-inducible protein 30##AK291551|IFI30|10437|interferon, gamma-inducible protein 30##BC021136|IFI30|10437|interferon, gamma-inducible protein 30##BC031020|IFI30|10437|interferon, gamma-inducible protein 30##DQ884410|IFI30|10437|interferon, gamma-inducible protein 30##DQ892016|IFI30|10437|interferon, gamma-inducible protein 30##DQ895206|IFI30|10437|interferon, gamma-inducible protein 30	1.04674	CTCF.p2:35:0.996
chr5	133362365	133362518	reg1017913.p1	7.443	+	AK095989 NM_003374	-21618	-	TSC_hg19_v1_chr5_-_133340431 L06132	-22011	-	TSC_hg19_v1_chr5_-_133340397 BC071168 AK293639	-22040	-	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	88078	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	88920	+	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	150182	-	AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##L06132|VDAC1|7416|voltage-dependent anion channel 1##BC071168|VDAC1|7416|voltage-dependent anion channel 1##AK293639|VDAC1|7416|voltage-dependent anion channel 1##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1	0.066726	
chr6_qbl_hap6	3892028	3892165	reg1020208.p1	7.443	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.442633	CTCF.p2:9:0.443
chr16	15116192	15116305	reg1018372.p2	7.442	+	AY203955 TSC_hg19_v1_chr16_+_15069016 DQ111782	-47216	+	AK299111 BC060871 TSC_hg19_v1_chr16_+_15068985	-47263	+	BX648066 TSC_hg19_v1_chr16_+_15068982	-47265	+	CU675948 AF092440 BC017336 NM_173474 AK300557 TSC_hg19_v1_chr16_-_15149897	33629	-	AB527833 AK300253 HQ258337 BC036182 AK314769 AK316520 BC132688 BC132690 BC104660 AJ272050 AF227156 NM_018427 AK225662	71880	-	TSC_hg19_v1_chr16_+_15489610 DQ004255 DQ004256 NM_001128423 NM_173803	373353	+	AY203955|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##DQ111782|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##AK299111|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC060871|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BX648066|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##AF092440|NTAN1|123803|N-terminal asparagine amidase##BC017336|NTAN1|123803|N-terminal asparagine amidase##NM_173474|NTAN1|123803|N-terminal asparagine amidase##AK300557|NTAN1|123803|N-terminal asparagine amidase##AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##HQ258337|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##DQ004255|MPV17L|255027|MPV17 mitochondrial membrane protein-like##DQ004256|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_001128423|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_173803|MPV17L|255027|MPV17 mitochondrial membrane protein-like	0.0	
chr3	54904505	54904615	reg1018545.p1	7.442	+	TSC_hg19_v1_chr3_+_54156691 AF516696 NM_018398	-747869	+	BC137502 BC137505 TSC_hg19_v1_chr3_+_54156614	-747961	+	TSC_hg19_v1_chr3_-_53925897 AF537132 AK289594 BC013162 AK123406 AF085359 AF161415 NM_021237	-978631	-	BC074741 AF225421 NM_020678	57456	-	TSC_hg19_v1_chr3_-_55514935 CU687936 AB590996 BC074783	610384	-	TSC_hg19_v1_chr3_-_55515377 L20861	610815	-	AF516696|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##NM_018398|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137502|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137505|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##AF537132|SELK|58515|selenoprotein K##AK289594|SELK|58515|selenoprotein K##BC013162|SELK|58515|selenoprotein K##AK123406|SELK|58515|selenoprotein K##AF085359|SELK|58515|selenoprotein K##AF161415|SELK|58515|selenoprotein K##NM_021237|SELK|58515|selenoprotein K##BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A##L20861|WNT5A|7474|wingless-type MMTV integration site family, member 5A	0.387508	CTCF.p2:-13:0.388
chr6	104773588	104773714	reg1015101.p1	7.442	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	-2926746	+	BC037954 TSC_hg19_v1_chr6_+_101846686	-2926974	+	HM149340 TSC_hg19_v1_chr6_+_101841583	-2932145	+	TSC_hg19_v1_chr6_-_105307736 AK291760	534074	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	534111	-	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	534137	-	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	0.981378	CTCF.p2:11:0.981
chr8	128902360	128902521	reg1016955.p2	7.442	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-95657	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-153950	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-154115	+	AB042405 NM_031415	1896693	-	BC003599 TSC_hg19_v1_chr8_-_130951934	2049475	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	2049566	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chrX	149617689	149617805	reg1019122.p2	7.442	+	NM_001177466 NM_005491 U46023 BC136324 AB527434 AK315217	-3965	+	TSC_hg19_v1_chrX_+_149531583 NM_001177465 AK294478	-86185	+	TSC_hg19_v1_chrX_+_149529838 AK302612	-87914	+	TSC_hg19_v1_chrX_+_149737070 NM_000252 AK291710 U46024 AK297057 AK304036	119299	+	AL832715 AK297021 BC030779 TSC_hg19_v1_chrX_+_149737092	119357	+	TSC_hg19_v1_chrX_+_149861868 BC032947 NM_003828 AK226109 AF057354 AJ224979	244174	+	NM_001177466|MAMLD1|10046|mastermind-like domain containing 1##NM_005491|MAMLD1|10046|mastermind-like domain containing 1##U46023|MAMLD1|10046|mastermind-like domain containing 1##BC136324|MAMLD1|10046|mastermind-like domain containing 1##AK315217|MAMLD1|10046|mastermind-like domain containing 1##NM_001177465|MAMLD1|10046|mastermind-like domain containing 1##AK294478|MAMLD1|10046|mastermind-like domain containing 1##AK302612|MAMLD1|10046|mastermind-like domain containing 1##NM_000252|MTM1|4534|myotubularin 1##AK291710|MTM1|4534|myotubularin 1##U46024|MTM1|4534|myotubularin 1##AK297057|MTM1|4534|myotubularin 1##AK304036|MTM1|4534|myotubularin 1##AL832715|MTM1|4534|myotubularin 1##AK297021|MTM1|4534|myotubularin 1##BC030779|MTM1|4534|myotubularin 1##BC032947|MTMR1|8776|myotubularin related protein 1##NM_003828|MTMR1|8776|myotubularin related protein 1##AK226109|MTMR1|8776|myotubularin related protein 1##AF057354|MTMR1|8776|myotubularin related protein 1##AJ224979|MTMR1|8776|myotubularin related protein 1	0.246667	CTCF.p2:-8:0.247
chr10	9723763	9723853	reg1018795.p1	7.441	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-1626325	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-1627033	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-1627159	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	1323449	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	1323477	+	AK299548 TSC_hg19_v1_chr10_+_11047339	1323532	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.899625	CTCF.p2:6:0.900
chr18	49869586	49869718	reg1020526.p1	7.441	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-2539	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-3111	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-1145612	-	TSC_hg19_v1_chr18_-_51690988 AL110266	1821340	-	AF072246 TSC_hg19_v1_chr18_-_51750614	1880885	-	TSC_hg19_v1_chr18_-_51750997 BC032638	1881313	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	0.275135	CTCF.p2:10:0.275
chr4	22692458	22692603	reg1017018.p2	7.441	+	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	-174976	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	-742146	-	BX648990 DQ148490 NM_001035003	-993213	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	2062	+	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	1199123	-	AF279891 TSC_hg19_v1_chr4_-_24586127	1893546	-	AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##NM_147182|KCNIP4|80333|Kv channel interacting protein 4##BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.826637	CTCF.p2:9:0.827
chr4	74528553	74528680	reg1020066.p1	7.441	+	AY217664 BC058835 NM_177532 AY217665 CR749283 AK126346 NM_201431	-42397	-	AK290556 NM_001133 BC109020 BC109021 L35486	-181146	+	NM_001134 V01514 AK297669 TSC_hg19_v1_chr4_+_74301937 AK297674 AK314817 BC027881 DQ890942 DQ894103 CU693306	-226661	+	NM_000584 Y00787 AK131067 AK311874 M17017 M26383 BC013615 AF043337 AB590232 DQ890564 DQ893727 BT007067 CR542151 Z11686	77682	+	NM_002993 AK311981 U81234 BC013744 DQ891500 DQ894692 AB463491	173753	+	NM_002620 BC130653 BC130657 HQ258042	190427	+	AY217664|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##BC058835|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_177532|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AY217665|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##CR749283|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK126346|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_201431|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK290556|AFM|173|afamin##NM_001133|AFM|173|afamin##BC109020|AFM|173|afamin##BC109021|AFM|173|afamin##L35486|AFM|173|afamin##NM_001134|AFP|174|alpha-fetoprotein##V01514|AFP|174|alpha-fetoprotein##AK297669|AFP|174|alpha-fetoprotein##AK297674|AFP|174|alpha-fetoprotein##AK314817|AFP|174|alpha-fetoprotein##BC027881|AFP|174|alpha-fetoprotein##DQ890942|AFP|174|alpha-fetoprotein##DQ894103|AFP|174|alpha-fetoprotein##NM_000584|IL8|3576|interleukin 8##Y00787|IL8|3576|interleukin 8##AK131067|IL8|3576|interleukin 8##AK311874|IL8|3576|interleukin 8##M17017|IL8|3576|interleukin 8##M26383|IL8|3576|interleukin 8##BC013615|IL8|3576|interleukin 8##DQ890564|IL8|3576|interleukin 8##DQ893727|IL8|3576|interleukin 8##BT007067|IL8|3576|interleukin 8##CR542151|IL8|3576|interleukin 8##Z11686|IL8|3576|interleukin 8##NM_002993|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##AK311981|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##U81234|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##BC013744|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ891500|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##DQ894692|CXCL6|6372|chemokine (C-X-C motif) ligand 6 (granulocyte chemotactic protein 2)##NM_002620|PF4V1|5197|platelet factor 4 variant 1##BC130653|PF4V1|5197|platelet factor 4 variant 1##BC130657|PF4V1|5197|platelet factor 4 variant 1##HQ258042|PF4V1|5197|platelet factor 4 variant 1	0.0	
chrX	79540977	79541089	reg1019909.p1	7.441	+	BC014194 NM_016954 AY035371 AB527983 CU680824	-263279	+	AK097514 NM_001109878 NM_001109879	-270779	+	AK313154 NM_001171581 NM_004867	-918006	-	AK128147 NM_001170574	49969	+	BX537938 NM_152630 BC030784 AK313875 BC028710 BC034979	134929	+	BC111490 AY497046 AY497048 AY497049 AY497050 AY497051 AY497052 AY497053 AY497054 AY497055 NM_153252	524174	-	BC014194|TBX22|50945|T-box 22##NM_016954|TBX22|50945|T-box 22##AY035371|TBX22|50945|T-box 22##AK097514|TBX22|50945|T-box 22##NM_001109878|TBX22|50945|T-box 22##NM_001109879|TBX22|50945|T-box 22##AK313154|ITM2A|9452|integral membrane protein 2A##NM_001171581|ITM2A|9452|integral membrane protein 2A##NM_004867|ITM2A|9452|integral membrane protein 2A##AK128147|FAM46D|169966|family with sequence similarity 46, member D##NM_001170574|FAM46D|169966|family with sequence similarity 46, member D##BX537938|FAM46D|169966|family with sequence similarity 46, member D##NM_152630|FAM46D|169966|family with sequence similarity 46, member D##BC030784|FAM46D|169966|family with sequence similarity 46, member D##AK313875|FAM46D|169966|family with sequence similarity 46, member D##BC028710|FAM46D|169966|family with sequence similarity 46, member D##BC034979|FAM46D|169966|family with sequence similarity 46, member D##BC111490|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497046|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497048|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497049|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497050|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497051|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497052|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497053|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497054|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497055|BRWD3|254065|bromodomain and WD repeat domain containing 3##NM_153252|BRWD3|254065|bromodomain and WD repeat domain containing 3	0.272809	CTCF.p2:34:0.273
chr13	61023183	61023290	reg1019642.p2	7.440	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-51757	+	BX537910 NM_001146071 NM_030794	-52646	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-285135	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	966017	-	AK289924 NM_022843	966418	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	6781268	-	EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9	0.344512	CTCF.p2:-4:0.345
chr16	33723347	33723471	reg1018358.p1	7.440	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-461276	+	AL133588 NM_016212	-461895	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-517811	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	12931863	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	12931897	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	12999653	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.998744	CTCF.p2:-24:0.999
chr2	179660909	179661080	reg1018038.p1	7.440	+	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	-1293	-	TSC_hg19_v1_chr2_+_179387947 AK093733	-273034	+	TSC_hg19_v1_chr2_+_179345280 AF286162 BC044567 EU832321 EU832406	-315564	+	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	11109	-	AL832777 NM_173648	253791	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	468411	-	X98114|TTN|7273|titin##X98115|TTN|7273|titin##AK093733|LOC100506866|100506866|uncharacterized LOC100506866##AF286162|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##BC044567|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##EU832321|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##EU832406|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1	0.748486	CTCF.p2:-5:0.748
chr22	39795624	39795804	reg1018006.p1	7.440	+	AJ002303 NM_145738	-35540	+	TSC_hg19_v1_chr22_+_39745981 NM_004711 NM_145731 BC000731 AK295863 CR456590 AK289507 AB209372 CU013190 CU013478 AB587338 AJ002304 AJ002305 BT007135 CU674372	-49809	+	BC014017 BC013674 BC013861 BC015032 BC015767 BC088373 BC063662 BC071666 CR456566 BC006483 BC012146 BC012786 TSC_hg19_v1_chr22_-_39715629 AK092695 AK297711 AK315693 AX747675 BC008492 BC107711 D28415 NM_000967 NM_001033853	-80075	-	BC050554 NM_006116 NM_153497 TSC_hg19_v1_chr22_+_39795796 AK296314 BC038582 AF425640 AK312456 U49928	56	+	TSC_hg19_v1_chr22_+_39795812 AK291668 AK316004 AK308903 AB591024 CU690722	97	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	57606	+	AJ002303|SYNGR1|9145|synaptogyrin 1##NM_145738|SYNGR1|9145|synaptogyrin 1##NM_004711|SYNGR1|9145|synaptogyrin 1##NM_145731|SYNGR1|9145|synaptogyrin 1##BC000731|SYNGR1|9145|synaptogyrin 1##AK295863|SYNGR1|9145|synaptogyrin 1##CR456590|SYNGR1|9145|synaptogyrin 1##AK289507|SYNGR1|9145|synaptogyrin 1##CU013190|SYNGR1|9145|synaptogyrin 1##CU013478|SYNGR1|9145|synaptogyrin 1##AJ002304|SYNGR1|9145|synaptogyrin 1##AJ002305|SYNGR1|9145|synaptogyrin 1##BT007135|SYNGR1|9145|synaptogyrin 1##BC014017|RPL3|6122|ribosomal protein L3##BC013674|RPL3|6122|ribosomal protein L3##BC013861|RPL3|6122|ribosomal protein L3##BC015032|RPL3|6122|ribosomal protein L3##BC015767|RPL3|6122|ribosomal protein L3##BC088373|RPL3|6122|ribosomal protein L3##BC063662|RPL3|6122|ribosomal protein L3##BC071666|RPL3|6122|ribosomal protein L3##CR456566|RPL3|6122|ribosomal protein L3##BC006483|RPL3|6122|ribosomal protein L3##BC012146|RPL3|6122|ribosomal protein L3##BC012786|RPL3|6122|ribosomal protein L3##AK092695|RPL3|6122|ribosomal protein L3##AK297711|RPL3|6122|ribosomal protein L3##AK315693|RPL3|6122|ribosomal protein L3##BC008492|RPL3|6122|ribosomal protein L3##BC107711|RPL3|6122|ribosomal protein L3##NM_000967|RPL3|6122|ribosomal protein L3##NM_001033853|RPL3|6122|ribosomal protein L3##BC050554|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_006116|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_153497|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK296314|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##BC038582|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AF425640|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK312456|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##U49928|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK291668|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK316004|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK308903|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	0.0	
chr10	101769811	101769964	reg1016795.p2	7.439	+	TSC_hg19_v1_chr10_-_101769671 AL833283 NM_015221	-226	-	BC020878 TSC_hg19_v1_chr10_-_101690657 AK128576	-79184	-	TSC_hg19_v1_chr10_+_101542570 X96395 BC136419 U63970	-227324	+	X14329 BC027897 NM_001308 AK313972	71738	-	TSC_hg19_v1_chr10_-_101945727 NM_006459 AK222480 AK298427 AK315580	175849	-	TSC_hg19_v1_chr10_-_101945787 AF064093 NM_001100626	175915	-	AL833283|DNMBP|23268|dynamin binding protein##NM_015221|DNMBP|23268|dynamin binding protein##AK128576|DNMBP|23268|dynamin binding protein##X96395|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##BC136419|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U63970|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##X14329|CPN1|1369|carboxypeptidase N, polypeptide 1##BC027897|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_001308|CPN1|1369|carboxypeptidase N, polypeptide 1##AK313972|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_006459|ERLIN1|10613|ER lipid raft associated 1##AK222480|ERLIN1|10613|ER lipid raft associated 1##AK298427|ERLIN1|10613|ER lipid raft associated 1##AK315580|ERLIN1|10613|ER lipid raft associated 1##AF064093|ERLIN1|10613|ER lipid raft associated 1##NM_001100626|ERLIN1|10613|ER lipid raft associated 1	0.99351	CTCF.p2:-51:0.994
chr10	52770784	52770918	reg1017166.p1	7.439	+	TSC_hg19_v1_chr10_+_52751129 D45864	-19730	+	TSC_hg19_v1_chr10_+_52750944 AK300110	-19911	+	TSC_hg19_v1_chr10_+_52750904 NM_001098512	-19944	+	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	63440	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	688496	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	1303264	+	D45864|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK300110|PRKG1|5592|protein kinase, cGMP-dependent, type I##NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	0.999615	CTCF.p2:6:1.000
chr3	10987502	10987623	reg1019878.p1	7.439	+	TSC_hg19_v1_chr3_+_10857912 AK312719 BC036083 NM_014229 S75989 AB527355	-129655	+	L20977 TSC_hg19_v1_chr3_-_10749723	-237840	-	AB210008 TSC_hg19_v1_chr3_-_10547352	-440216	-	NM_003042 TSC_hg19_v1_chr3_+_11034421	46859	+	TSC_hg19_v1_chr3_+_11034439 BC057291 BC033904	46900	+	AK289412 NM_001098213	191216	+	AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##L20977|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC057291|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC033904|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##AK289412|HRH1|3269|histamine receptor H1##NM_001098213|HRH1|3269|histamine receptor H1	0.999639	CTCF.p2:-12:1.000
chr15	45418904	45419007	reg1018235.p1	7.438	+	TSC_hg19_v1_chr15_+_45406523 NM_207581 AK303955 BC137465 BX537581 DQ489734	-12361	+	TSC_hg19_v1_chr15_-_45406363 AF267981 NM_014080	-12592	-	TSC_hg19_v1_chr15_-_45406336 AF230496	-12624	-	BC029819 NM_144565 AK292771 BC020841 TSC_hg19_v1_chr15_-_45422078 AK056896	3113	-	AK290372 AF213465 NM_017434 NM_175940 AK075268 AF230495 BC114628 BC114938	3211	+	TSC_hg19_v1_chr15_-_45480165 AK094391 AK303749	61209	-	NM_207581|DUOXA2|405753|dual oxidase maturation factor 2##AK303955|DUOXA2|405753|dual oxidase maturation factor 2##BC137465|DUOXA2|405753|dual oxidase maturation factor 2##BX537581|DUOXA2|405753|dual oxidase maturation factor 2##DQ489734|DUOXA2|405753|dual oxidase maturation factor 2##AF267981|DUOX2|50506|dual oxidase 2##NM_014080|DUOX2|50506|dual oxidase 2##AF230496|DUOX2|50506|dual oxidase 2##BC029819|DUOXA1|90527|dual oxidase maturation factor 1##NM_144565|DUOXA1|90527|dual oxidase maturation factor 1##AK292771|DUOXA1|90527|dual oxidase maturation factor 1##BC020841|DUOXA1|90527|dual oxidase maturation factor 1##AK056896|DUOXA1|90527|dual oxidase maturation factor 1##AK290372|DUOX1|53905|dual oxidase 1##AF213465|DUOX1|53905|dual oxidase 1##NM_017434|DUOX1|53905|dual oxidase 1##NM_175940|DUOX1|53905|dual oxidase 1##AK075268|DUOX1|53905|dual oxidase 1##AF230495|DUOX1|53905|dual oxidase 1##BC114628|DUOX1|53905|dual oxidase 1##BC114938|DUOX1|53905|dual oxidase 1##AK094391|SHF|90525|Src homology 2 domain containing F##AK303749|SHF|90525|Src homology 2 domain containing F	0.767692	CTCF.p2:-7:0.768
chr20	61940990	61941113	reg1019409.p1	7.438	+	BC043183 NM_020882 BC041767	-16495	+	AK123367 TSC_hg19_v1_chr20_+_61915676	-25376	+	TSC_hg19_v1_chr20_+_61904184 BC000786 BC011876 BC006085 AK223427 BC028233	-36852	+	X89741 Y08421 AB590558 AK314907 TSC_hg19_v1_chr20_-_61992648 BC096290 BC096291 BC096292 BC096293 L35901 NM_000744 U62433	51580	-	BT007043 AB527167 Y15065 BC000699 AF110020 TSC_hg19_v1_chr20_-_62104002 AK293727 AF033348 AF074247 D82346 NM_004518 NM_172106 NM_172107 NM_172108 NM_172109	162878	-	TSC_hg19_v1_chr20_-_62130437 X70940 AK307536 NM_001958 BC110409	189462	-	BC043183|COL20A1|57642|collagen, type XX, alpha 1##NM_020882|COL20A1|57642|collagen, type XX, alpha 1##BC041767|COL20A1|57642|collagen, type XX, alpha 1##AK123367|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##BC000786|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##BC011876|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##BC006085|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##AK223427|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##BC028233|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##X89741|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##Y08421|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##AK314907|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096290|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096291|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096292|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096293|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##L35901|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##NM_000744|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##U62433|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BT007043|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##Y15065|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##BC000699|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF110020|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AK293727|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF033348|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF074247|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##D82346|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_004518|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172106|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172107|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172108|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172109|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##X70940|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##AK307536|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##NM_001958|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC110409|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2	0.928861	CTCF.p2:-6:0.929
chr6	57133001	57133113	reg1017783.p1	7.438	+	TSC_hg19_v1_chr6_-_57087081 AF161486 BC015021 NM_016277 CR749371 AK311123	-45986	-	AB034244 AK313796 NM_183227	-46827	-	AF095192 TSC_hg19_v1_chr6_+_57037453 AL050287 BC125039 AB462960 AM392695 AM393005 CR533496	-95619	+	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	49358	+	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	1154622	-	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	5862944	-	AF161486|RAB23|51715|RAB23, member RAS oncogene family##BC015021|RAB23|51715|RAB23, member RAS oncogene family##NM_016277|RAB23|51715|RAB23, member RAS oncogene family##CR749371|RAB23|51715|RAB23, member RAS oncogene family##AK311123|RAB23|51715|RAB23, member RAS oncogene family##AB034244|RAB23|51715|RAB23, member RAS oncogene family##AK313796|RAB23|51715|RAB23, member RAS oncogene family##NM_183227|RAB23|51715|RAB23, member RAS oncogene family##AF095192|BAG2|9532|BCL2-associated athanogene 2##AL050287|BAG2|9532|BCL2-associated athanogene 2##BC125039|BAG2|9532|BCL2-associated athanogene 2##AM392695|BAG2|9532|BCL2-associated athanogene 2##AM393005|BAG2|9532|BCL2-associated athanogene 2##CR533496|BAG2|9532|BCL2-associated athanogene 2##BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2	0.99179	CTCF.p2:6:0.992
chr6_cox_hap2	2679655	2679762	reg1019731.p1	7.438	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr1	155140253	155140434	reg1001041.p1	7.436	+	AB028128 BC032223 BC104202 BC104203 AF312922 NM_018973 AF312923 NM_153741 BC065233 AK293625 TSC_hg19_v1_chr1_-_155113008 BC104481	-27473	-	BC005943 TSC_hg19_v1_chr1_+_155108343 BC010869 BC069245 CR457148 CU679421	-31978	+	TSC_hg19_v1_chr1_+_155108327 AK289551 NM_001122837 NM_001122839 NM_018845 AF126023 BC009621 AF126024 BC012378	-32034	+	TSC_hg19_v1_chr1_-_155145674 BC048205	5342	-	BX647396 TSC_hg19_v1_chr1_-_155145781 AK311907 AK024167 CU691196 DQ890793 DQ893948 BC029806 NM_173852 BC057233	5427	-	AK296300 TSC_hg19_v1_chr1_+_155146298	5941	+	AB028128|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##BC032223|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##BC104202|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##BC104203|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##AF312922|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##NM_018973|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##AF312923|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##NM_153741|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##BC065233|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##AK293625|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##BC104481|DPM3|54344|dolichyl-phosphate mannosyltransferase polypeptide 3##BC005943|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC010869|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC069245|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##CR457148|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AK289551|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122837|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122839|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_018845|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126023|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC009621|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126024|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC012378|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC048205|KRTCAP2|200185|keratinocyte associated protein 2##BX647396|KRTCAP2|200185|keratinocyte associated protein 2##AK311907|KRTCAP2|200185|keratinocyte associated protein 2##AK024167|KRTCAP2|200185|keratinocyte associated protein 2##DQ890793|KRTCAP2|200185|keratinocyte associated protein 2##DQ893948|KRTCAP2|200185|keratinocyte associated protein 2##BC029806|KRTCAP2|200185|keratinocyte associated protein 2##NM_173852|KRTCAP2|200185|keratinocyte associated protein 2##BC057233|KRTCAP2|200185|keratinocyte associated protein 2##AK296300|TRIM46|80128|tripartite motif containing 46	0.0	
chr12	52072013	52072138	reg1020243.p1	7.436	+	NM_001177984 AF225988 FJ611941	-15501	+	TSC_hg19_v1_chr12_+_51985016 AB027567 NM_014191	-87058	+	TSC_hg19_v1_chr12_+_51818698 BC025994 AF069512 AF107099 CU693092 AL831915	-253291	+	AK129980 NM_001013690	153625	-	AK125517 BC121152 NM_001130015 NM_182608 BC121153 AF517108 AF517109 BX537908 BX640656 BX647684 BX649168	209820	+	HM161905 TSC_hg19_v1_chr12_+_52300731 HM161906	228636	+	NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##AB027567|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##NM_014191|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##BC025994|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AF069512|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AF107099|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AL831915|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AK129980|FIGNL2|401720|fidgetin-like 2##NM_001013690|FIGNL2|401720|fidgetin-like 2##AK125517|ANKRD33|341405|ankyrin repeat domain 33##BC121152|ANKRD33|341405|ankyrin repeat domain 33##NM_001130015|ANKRD33|341405|ankyrin repeat domain 33##NM_182608|ANKRD33|341405|ankyrin repeat domain 33##BC121153|ANKRD33|341405|ankyrin repeat domain 33##AF517108|ANKRD33|341405|ankyrin repeat domain 33##AF517109|ANKRD33|341405|ankyrin repeat domain 33##BX537908|ANKRD33|341405|ankyrin repeat domain 33##BX640656|ANKRD33|341405|ankyrin repeat domain 33##BX647684|ANKRD33|341405|ankyrin repeat domain 33##BX649168|ANKRD33|341405|ankyrin repeat domain 33##HM161905|ACVRL1|94|activin A receptor type II-like 1##HM161906|ACVRL1|94|activin A receptor type II-like 1	0.349773	CTCF.p2:5:0.350
chr3	43585828	43585940	reg1017584.p1	7.436	+	TSC_hg19_v1_chr3_+_43328077 AK291360 NM_001100594 NM_017719 BC071567 AK295187 CR749621 AK314376	-257815	+	TSC_hg19_v1_chr3_-_43147568 BC060861 NM_032806	-438333	-	NM_001129908 AK311059 AK311069 AK091001 AX746726	-565091	+	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	77554	-	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	77629	-	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	146537	+	AK291360|SNRK|54861|SNF related kinase##NM_001100594|SNRK|54861|SNF related kinase##NM_017719|SNRK|54861|SNF related kinase##BC071567|SNRK|54861|SNF related kinase##AK295187|SNRK|54861|SNF related kinase##CR749621|SNRK|54861|SNF related kinase##AK314376|SNRK|54861|SNF related kinase##BC060861|C3orf39|84892|chromosome 3 open reading frame 39##NM_032806|C3orf39|84892|chromosome 3 open reading frame 39##NM_001129908|FAM198A|729085|family with sequence similarity 198, member A##AK311059|FAM198A|729085|family with sequence similarity 198, member A##AK311069|FAM198A|729085|family with sequence similarity 198, member A##AK091001|FAM198A|729085|family with sequence similarity 198, member A##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5	0.965981	CTCF.p2:-5:0.966
chr10	74021214	74021394	reg1018243.p2	7.435	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-45193	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-45516	+	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	-45540	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	12520	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	93374	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	93622	-	AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	0.01691	
chr5	143521957	143522087	reg1018935.p2	7.435	+	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	-330264	+	NM_001018074 NM_001018075 NM_001018077	-706946	-	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-737856	-	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	28113	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	28154	-	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	28224	-	AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5	0.687451	CTCF.p2:25:0.687
chr5	150618923	150619038	reg1018974.p1	7.435	+	TSC_hg19_v1_chr5_-_150603654 AK292841 AK298063 AL713742 NM_015621	-15300	-	TSC_hg19_v1_chr5_-_150603648 AK225826	-15349	-	TSC_hg19_v1_chr5_-_150537341 NM_001155	-81592	-	NM_000405 NM_001167607 TSC_hg19_v1_chr5_+_150632745 AK225978 L01439 M76477 AK312494 X62078 AK298867 BC009273 X61095 CU679281 DQ891914 DQ895098 X16087	13735	+	AK127978 NM_001145017 NM_181774	64349	-	BC101100 BC101101 BC101102 BC101103 AK297682 AY162214 AK122630 AK309575 NM_181776	108139	-	AK292841|CCDC69|26112|coiled-coil domain containing 69##AK298063|CCDC69|26112|coiled-coil domain containing 69##AL713742|CCDC69|26112|coiled-coil domain containing 69##NM_015621|CCDC69|26112|coiled-coil domain containing 69##AK225826|CCDC69|26112|coiled-coil domain containing 69##NM_001155|ANXA6|309|annexin A6##NM_000405|GM2A|2760|GM2 ganglioside activator##NM_001167607|GM2A|2760|GM2 ganglioside activator##L01439|GM2A|2760|GM2 ganglioside activator##M76477|GM2A|2760|GM2 ganglioside activator##AK312494|GM2A|2760|GM2 ganglioside activator##X62078|GM2A|2760|GM2 ganglioside activator##AK298867|GM2A|2760|GM2 ganglioside activator##BC009273|GM2A|2760|GM2 ganglioside activator##X61095|GM2A|2760|GM2 ganglioside activator##DQ891914|GM2A|2760|GM2 ganglioside activator##DQ895098|GM2A|2760|GM2 ganglioside activator##X16087|GM2A|2760|GM2 ganglioside activator##AK127978|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_001145017|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_181774|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##BC101100|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101101|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101102|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101103|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK297682|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AY162214|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK309575|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##NM_181776|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2	0.572988	CTCF.p2:13:0.573
chr11	123582102	123582225	reg1017572.p1	7.434	+	TSC_hg19_v1_chr11_-_123525303 AK314513 AL136589 NM_001040151 NM_018400	-56856	-	AJ243396 AB032984 TSC_hg19_v1_chr11_-_123525042	-57202	-	AB033027 TSC_hg19_v1_chr11_+_123431038	-151126	+	AK023751 TSC_hg19_v1_chr11_-_123612326 BC013382 NM_003455	30182	-	TSC_hg19_v1_chr11_-_123612369 AK226047	30210	-	NM_001005188 BC136855 BC136856	43075	-	AK314513|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AL136589|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_001040151|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_018400|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AB033027|GRAMD1B|57476|GRAM domain containing 1B##AK023751|ZNF202|7753|zinc finger protein 202##BC013382|ZNF202|7753|zinc finger protein 202##NM_003455|ZNF202|7753|zinc finger protein 202##AK226047|ZNF202|7753|zinc finger protein 202##NM_001005188|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1##BC136855|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1##BC136856|OR6X1|390260|olfactory receptor, family 6, subfamily X, member 1	0.322243	CTCF.p2:30:0.322
chr11	58926048	58926158	reg1017657.p1	7.434	+	NM_022074 NM_198847 AK291453 BC071759 AK092061 AX747338	-13824	+	TSC_hg19_v1_chr11_+_58910331 AK092237 AX747422 NM_001142519 NM_001142520 NM_001142521	-15793	+	TSC_hg19_v1_chr11_-_58910222 AK124475 BC028022	-15860	-	TSC_hg19_v1_chr11_+_58939648 NM_015177	13582	+	TSC_hg19_v1_chr11_+_58940008 AB023154 AB385405	13926	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	54304	-	NM_022074|FAM111A|63901|family with sequence similarity 111, member A##NM_198847|FAM111A|63901|family with sequence similarity 111, member A##AK291453|FAM111A|63901|family with sequence similarity 111, member A##BC071759|FAM111A|63901|family with sequence similarity 111, member A##AK092061|FAM111A|63901|family with sequence similarity 111, member A##AK092237|FAM111A|63901|family with sequence similarity 111, member A##NM_001142519|FAM111A|63901|family with sequence similarity 111, member A##NM_001142520|FAM111A|63901|family with sequence similarity 111, member A##NM_001142521|FAM111A|63901|family with sequence similarity 111, member A##NM_015177|DTX4|23220|deltex homolog 4 (Drosophila)##AB023154|DTX4|23220|deltex homolog 4 (Drosophila)##BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1	0.98059	CTCF.p2:22:0.981
chr17	29844709	29844819	reg1019417.p1	7.434	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-29703	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-125900	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-126097	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	341507	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	383902	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	383967	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.154714	
chr12	72240246	72240389	reg1019789.p2	7.433	+	NM_001146213 NM_001146214 NM_022771 TSC_hg19_v1_chr12_+_72233538 AK022147 AK297626 AK307922 BC028352 AK225747 AL833639 AK225221 AK292306 AB449901	-6782	+	AB385582 AM393692 TSC_hg19_v1_chr12_+_72148987	-91369	+	BC021901 BC092475 TSC_hg19_v1_chr12_+_72148653 AF091035 NM_014999	-91662	+	AY098914 NM_173353 BC114442 BC114499 AK094614	92373	+	TSC_hg19_v1_chr12_-_72666143 BC093901 BC093903	425861	-	AK095156 TSC_hg19_v1_chr12_-_72666355	426026	-	NM_001146213|TBC1D15|64786|TBC1 domain family, member 15##NM_001146214|TBC1D15|64786|TBC1 domain family, member 15##NM_022771|TBC1D15|64786|TBC1 domain family, member 15##AK022147|TBC1D15|64786|TBC1 domain family, member 15##AK297626|TBC1D15|64786|TBC1 domain family, member 15##AK307922|TBC1D15|64786|TBC1 domain family, member 15##BC028352|TBC1D15|64786|TBC1 domain family, member 15##AK225747|TBC1D15|64786|TBC1 domain family, member 15##AL833639|TBC1D15|64786|TBC1 domain family, member 15##AK225221|TBC1D15|64786|TBC1 domain family, member 15##AK292306|TBC1D15|64786|TBC1 domain family, member 15##AB449901|TBC1D15|64786|TBC1 domain family, member 15##AM393692|RAB21|23011|RAB21, member RAS oncogene family##BC021901|RAB21|23011|RAB21, member RAS oncogene family##BC092475|RAB21|23011|RAB21, member RAS oncogene family##AF091035|RAB21|23011|RAB21, member RAS oncogene family##NM_014999|RAB21|23011|RAB21, member RAS oncogene family##AY098914|TPH2|121278|tryptophan hydroxylase 2##NM_173353|TPH2|121278|tryptophan hydroxylase 2##BC114442|TPH2|121278|tryptophan hydroxylase 2##BC114499|TPH2|121278|tryptophan hydroxylase 2##AK094614|TPH2|121278|tryptophan hydroxylase 2##BC093901|LOC283392|283392|uncharacterized LOC283392##BC093903|LOC283392|283392|uncharacterized LOC283392##AK095156|LOC283392|283392|uncharacterized LOC283392	0.86961	CTCF.p2:3:0.870
chr5	42912433	42912574	reg1017578.p1	7.433	+	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	-100512	-	AK303469 NM_001134848 AK127368 BC015985 BC039102 TSC_hg19_v1_chr5_+_42756958	-155565	+	BC136496 NM_001242460 NM_001242461 NM_001242462	-346539	+	TSC_hg19_v1_chr5_-_42993436 AK056817	80943	-	AB463523 BC067873 AY032883 NM_001014279	127793	-	AK307963 TSC_hg19_v1_chr5_+_43121018 BC045109	208498	+	Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK303469|CCDC152|100129792|coiled-coil domain containing 152##NM_001134848|CCDC152|100129792|coiled-coil domain containing 152##AK127368|CCDC152|100129792|coiled-coil domain containing 152##BC015985|CCDC152|100129792|coiled-coil domain containing 152##BC039102|CCDC152|100129792|coiled-coil domain containing 152##BC136496|GHR|2690|growth hormone receptor##NM_001242460|GHR|2690|growth hormone receptor##NM_001242461|GHR|2690|growth hormone receptor##NM_001242462|GHR|2690|growth hormone receptor##AK056817|FLJ32255|643977|uncharacterized LOC643977##BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39##AK307963|ZNF131|7690|zinc finger protein 131	0.212671	CTCF.p2:-18:0.213
chr5	98132160	98132270	reg1020674.p1	7.433	+	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-27174	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-1613228	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-1613273	-	BC054860 BC117134 NM_001270 AF006513	130013	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	1738858	+	AF529367 TSC_hg19_v1_chr5_+_99871306	1739055	+	BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A	0.175521	
chr7	25019127	25019274	reg1017469.p1	7.433	+	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-221603	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-221861	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	-222133	-	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	544	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	145677	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	145740	-	NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic	0.325124	CTCF.p2:38:0.325
chr2	76124033	76124153	reg1020247.p1	7.432	+	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-186042	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-186374	-	TSC_hg19_v1_chr2_+_75873908 NM_014763 AK295578 AK291250 BC030144 CU688824 AB463123 BC021051 D14660 DQ892303 DQ895502	-250155	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	1625325	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	3128745	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	3191040	-	BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_014763|MRPL19|9801|mitochondrial ribosomal protein L19##AK295578|MRPL19|9801|mitochondrial ribosomal protein L19##AK291250|MRPL19|9801|mitochondrial ribosomal protein L19##BC030144|MRPL19|9801|mitochondrial ribosomal protein L19##BC021051|MRPL19|9801|mitochondrial ribosomal protein L19##D14660|MRPL19|9801|mitochondrial ribosomal protein L19##DQ892303|MRPL19|9801|mitochondrial ribosomal protein L19##DQ895502|MRPL19|9801|mitochondrial ribosomal protein L19##BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta	0.050923	
chrX	152073201	152073345	reg1022095.p1	7.432	+	TSC_hg19_v1_chrX_+_151999606 AK026549	-73661	+	TSC_hg19_v1_chrX_+_151999576 BC000245	-73696	+	NM_001129765 NM_015922 U47105 BC007816 TSC_hg19_v1_chrX_+_151999551	-73739	+	AK296967 NM_001178106 NM_001178107 NM_001178108 NM_001178109 NM_001178110 NM_007150 AY997296 DQ508022 DQ508023 DQ508024 DQ508025 DQ508026	9736	+	AK301530 NM_001178113	13135	+	NM_001178115 AK095258	36956	+	AK026549|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##BC000245|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##NM_001129765|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##NM_015922|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##U47105|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##BC007816|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##AK296967|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178106|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178107|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178108|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178109|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178110|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_007150|ZNF185|7739|zinc finger protein 185 (LIM domain)##AY997296|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508022|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508023|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508024|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508025|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508026|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK301530|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178113|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178115|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK095258|ZNF185|7739|zinc finger protein 185 (LIM domain)	0.071566	
chr11	68038682	68038851	reg1017784.p1	7.431	+	TSC_hg19_v1_chr11_-_67981112 AF264782 BC002522 BC065287 BC087834 NM_016028 NM_017635 BC108304 AK314336 AK299201	-57787	-	NM_001277 NM_212469 TSC_hg19_v1_chr11_-_67888859	-149878	-	D10704 BC036471 TSC_hg19_v1_chr11_-_67888844	-150009	-	TSC_hg19_v1_chr11_-_68039418 AF264781	620	-	TSC_hg19_v1_chr11_-_68039453 NM_022338	692	-	TSC_hg19_v1_chr11_+_68080058 AB017498 NM_002335 AF077820 AF064548 BC150595 BC098397	41323	+	AF264782|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC002522|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC065287|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC087834|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_016028|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_017635|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC108304|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK314336|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK299201|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_001277|CHKA|1119|choline kinase alpha##NM_212469|CHKA|1119|choline kinase alpha##D10704|CHKA|1119|choline kinase alpha##BC036471|CHKA|1119|choline kinase alpha##AF264781|C11orf24|53838|chromosome 11 open reading frame 24##NM_022338|C11orf24|53838|chromosome 11 open reading frame 24##AB017498|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_002335|LRP5|4041|low density lipoprotein receptor-related protein 5##AF077820|LRP5|4041|low density lipoprotein receptor-related protein 5##AF064548|LRP5|4041|low density lipoprotein receptor-related protein 5##BC150595|LRP5|4041|low density lipoprotein receptor-related protein 5##BC098397|LRP5|4041|low density lipoprotein receptor-related protein 5	0.0	
chr12	99392602	99392725	reg1018144.p2	7.431	+	AY356353 AK315954 AM980945 AK294994 TSC_hg19_v1_chr12_-_99288638 AK295988 NM_001204065 NM_001204079 NM_001204080 NM_001204081	-104076	-	AK307509 TSC_hg19_v1_chr12_+_99039067 AF013263 NM_001160 NM_013229 NM_181861 NM_181868 NM_181869	-353666	+	TSC_hg19_v1_chr12_-_99038755 AK123069	-353858	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	155894	-	AK294191 NM_001204067	156204	-	NM_153364 AK312767 BC031221	648867	+	AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK307509|APAF1|317|apoptotic peptidase activating factor 1##AF013263|APAF1|317|apoptotic peptidase activating factor 1##NM_001160|APAF1|317|apoptotic peptidase activating factor 1##NM_013229|APAF1|317|apoptotic peptidase activating factor 1##NM_181861|APAF1|317|apoptotic peptidase activating factor 1##NM_181868|APAF1|317|apoptotic peptidase activating factor 1##NM_181869|APAF1|317|apoptotic peptidase activating factor 1##AK123069|IKBIP|121457|IKBKB interacting protein##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_153364|FAM71C|196472|family with sequence similarity 71, member C##AK312767|FAM71C|196472|family with sequence similarity 71, member C##BC031221|FAM71C|196472|family with sequence similarity 71, member C	0.251908	CTCF.p2:4:0.252
chr17	47625984	47626089	reg1017842.p2	7.431	+	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	-53348	+	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	-133788	-	BC095460 TSC_hg19_v1_chr17_-_47492215	-133821	-	TSC_hg19_v1_chr17_+_47653192 AL834282 NM_007225	27200	+	TSC_hg19_v1_chr17_+_47653475 BC022541 AK308928 AY358526 AB385434	27491	+	TSC_hg19_v1_chr17_-_47755471 BC003385 AK222589 AK312691 AJ000644 AK303268 AK316366 BC001269 AK293587 AK300616 NM_001007226 NM_001007227 NM_001007228 NM_001007229 NM_001007230 NM_003563	129396	-	AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##BC095460|PHB|5245|prohibitin##AL834282|NXPH3|11248|neurexophilin 3##NM_007225|NXPH3|11248|neurexophilin 3##BC022541|NXPH3|11248|neurexophilin 3##AK308928|NXPH3|11248|neurexophilin 3##AY358526|NXPH3|11248|neurexophilin 3##BC003385|SPOP|8405|speckle-type POZ protein##AK222589|SPOP|8405|speckle-type POZ protein##AK312691|SPOP|8405|speckle-type POZ protein##AJ000644|SPOP|8405|speckle-type POZ protein##AK303268|SPOP|8405|speckle-type POZ protein##AK316366|SPOP|8405|speckle-type POZ protein##BC001269|SPOP|8405|speckle-type POZ protein##AK293587|SPOP|8405|speckle-type POZ protein##AK300616|SPOP|8405|speckle-type POZ protein##NM_001007226|SPOP|8405|speckle-type POZ protein##NM_001007227|SPOP|8405|speckle-type POZ protein##NM_001007228|SPOP|8405|speckle-type POZ protein##NM_001007229|SPOP|8405|speckle-type POZ protein##NM_001007230|SPOP|8405|speckle-type POZ protein##NM_003563|SPOP|8405|speckle-type POZ protein	0.999425	CTCF.p2:7:0.999
chr6	10848008	10848142	reg1020779.p1	7.431	+	AK314408 AB593146 AK097831 AK310329 TSC_hg19_v1_chr6_-_10838761 BC033002 NM_001242385 NM_001242957 NM_005906	-9326	-	AK311340 TSC_hg19_v1_chr6_+_10748043 NM_001127711 NM_030969 AK294018 BC013913 AK291883 AK294152 BC007080 BC001033 BC071660	-100035	+	NM_001165258 NM_016462 TSC_hg19_v1_chr6_+_10723398 AF151028 BC010086 AK310191 AK309591 AF164962 BC002496 AK223462	-124777	+	AF091149 BC069603 AF079550 BC117316 BC117318 NM_004752	34004	-	AK128130 NM_001040274	38988	+	TSC_hg19_v1_chr6_-_11044539 AK000341 BC060809 BC050278 NM_017770	196505	-	AK314408|MAK|4117|male germ cell-associated kinase##AB593146|MAK|4117|male germ cell-associated kinase##AK097831|MAK|4117|male germ cell-associated kinase##AK310329|MAK|4117|male germ cell-associated kinase##BC033002|MAK|4117|male germ cell-associated kinase##NM_001242385|MAK|4117|male germ cell-associated kinase##NM_001242957|MAK|4117|male germ cell-associated kinase##NM_005906|MAK|4117|male germ cell-associated kinase##AK311340|TMEM14B|81853|transmembrane protein 14B##NM_001127711|TMEM14B|81853|transmembrane protein 14B##NM_030969|TMEM14B|81853|transmembrane protein 14B##BC013913|TMEM14B|81853|transmembrane protein 14B##AK291883|TMEM14B|81853|transmembrane protein 14B##AK294152|TMEM14B|81853|transmembrane protein 14B##BC007080|TMEM14B|81853|transmembrane protein 14B##BC001033|TMEM14B|81853|transmembrane protein 14B##BC071660|TMEM14B|81853|transmembrane protein 14B##NM_001165258|TMEM14C|51522|transmembrane protein 14C##NM_016462|TMEM14C|51522|transmembrane protein 14C##AF151028|TMEM14C|51522|transmembrane protein 14C##BC010086|TMEM14C|51522|transmembrane protein 14C##AK310191|TMEM14C|51522|transmembrane protein 14C##AK309591|TMEM14C|51522|transmembrane protein 14C##AF164962|TMEM14C|51522|transmembrane protein 14C##BC002496|TMEM14C|51522|transmembrane protein 14C##AK223462|TMEM14C|51522|transmembrane protein 14C##AF091149|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC069603|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AF079550|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117316|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117318|GCM2|9247|glial cells missing homolog 2 (Drosophila)##NM_004752|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AK128130|SYCP2L|221711|synaptonemal complex protein 2-like##NM_001040274|SYCP2L|221711|synaptonemal complex protein 2-like##AK000341|ELOVL2|54898|ELOVL fatty acid elongase 2##BC060809|ELOVL2|54898|ELOVL fatty acid elongase 2##BC050278|ELOVL2|54898|ELOVL fatty acid elongase 2##NM_017770|ELOVL2|54898|ELOVL fatty acid elongase 2	0.035227	
chr7	22541124	22541234	reg1019301.p2	7.431	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	-1332	-	AL833195 NM_012294	-144658	-	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-555697	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	225644	+	TSC_hg19_v1_chr7_+_22767104 X04403	225939	+	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	321264	-	BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	0.880617	CTCF.p2:-3:0.881
chr18	48662227	48662350	reg1020673.p1	7.430	+	TSC_hg19_v1_chr18_+_48556613 AK290770 BC002379	-105682	+	TSC_hg19_v1_chr18_+_48556582 NM_005359	-105754	+	TSC_hg19_v1_chr18_+_48494409 AK024822 AF308695 AK303027 AK310911 BC014624 AK223507 AB029151	-167867	+	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	60938	-	AY950679 TSC_hg19_v1_chr18_-_48723734	61424	-	TSC_hg19_v1_chr18_-_48724033 NM_016626	61752	-	AK290770|SMAD4|4089|SMAD family member 4##BC002379|SMAD4|4089|SMAD family member 4##NM_005359|SMAD4|4089|SMAD family member 4##AK024822|ELAC1|55520|elaC homolog 1 (E. coli)##AF308695|ELAC1|55520|elaC homolog 1 (E. coli)##AK310911|ELAC1|55520|elaC homolog 1 (E. coli)##BC014624|ELAC1|55520|elaC homolog 1 (E. coli)##AK223507|ELAC1|55520|elaC homolog 1 (E. coli)##AB029151|ELAC1|55520|elaC homolog 1 (E. coli)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)	0.071038	
chr19	42195446	42195553	reg1018478.p1	7.430	+	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	-3347	-	D90276 AK298701 NM_001817	-62065	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	-112922	+	TSC_hg19_v1_chr19_+_42212531 NM_004363	17029	+	TSC_hg19_v1_chr19_+_42212544 M29540 AK310844 BC034671 AK223101	17052	+	TSC_hg19_v1_chr19_+_42212619 CR749337 DQ890840 DQ896753 CU689928 M15042 X16455	17137	+	AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_004363|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M29540|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK310844|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##BC034671|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK223101|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##CR749337|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ890840|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ896753|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M15042|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##X16455|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5	0.975018	CTCF.p2:-2:0.975
chr1	109631937	109632075	reg1019037.p1	7.429	+	AB587451 TSC_hg19_v1_chr1_-_109618626 X84003 BC017821 BC121180 BC121181 AK312158 NM_005645	-13405	-	TSC_hg19_v1_chr1_-_109584725 AK225781 AB020700 AK289789 BC039254 BC034964 NM_001142550 NM_001142551 NM_014969	-47287	-	TSC_hg19_v1_chr1_-_109506107 AK090563 AX746511 BC002939 AK293786 NM_001048210 NM_015127	-125929	-	BC066918 AK075191 TSC_hg19_v1_chr1_+_109633380 AF164793 AK310192 BC008739 BC065186 NM_020141 AK291293 BC067116	1388	+	BC071822 TSC_hg19_v1_chr1_+_109642814	10808	+	BC127904 BC141949 BC141950 BC150515 TSC_hg19_v1_chr1_+_109648698	16639	+	X84003|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC121180|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC121181|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##AK312158|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##NM_005645|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##AK225781|WDR47|22911|WD repeat domain 47##AB020700|WDR47|22911|WD repeat domain 47##AK289789|WDR47|22911|WD repeat domain 47##BC039254|WDR47|22911|WD repeat domain 47##BC034964|WDR47|22911|WD repeat domain 47##NM_001142550|WDR47|22911|WD repeat domain 47##NM_001142551|WDR47|22911|WD repeat domain 47##NM_014969|WDR47|22911|WD repeat domain 47##AK090563|CLCC1|23155|chloride channel CLIC-like 1##BC002939|CLCC1|23155|chloride channel CLIC-like 1##AK293786|AKNAD1|254268|AKNA domain containing 1##NM_001048210|CLCC1|23155|chloride channel CLIC-like 1##NM_015127|CLCC1|23155|chloride channel CLIC-like 1##BC066918|TMEM167B|56900|transmembrane protein 167B##AK075191|TMEM167B|56900|transmembrane protein 167B##AF164793|TMEM167B|56900|transmembrane protein 167B##AK310192|TMEM167B|56900|transmembrane protein 167B##BC008739|TMEM167B|56900|transmembrane protein 167B##BC065186|TMEM167B|56900|transmembrane protein 167B##NM_020141|TMEM167B|56900|transmembrane protein 167B##AK291293|TMEM167B|56900|transmembrane protein 167B##BC067116|TMEM167B|56900|transmembrane protein 167B##BC071822|SCARNA2|677766|small Cajal body-specific RNA 2	0.999506	CTCF.p2:9:1.000
chr11	123132299	123132439	reg1018448.p1	7.429	+	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	-66364	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	-66467	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	-199490	-	TSC_hg19_v1_chr11_+_123396366 AK127457	263986	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	264135	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	298604	+	AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AK127457|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B	1.067438	CTCF.p2:15:1.000
chr15	25955358	25955491	reg1020652.p1	7.429	+	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	-271246	-	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	-271323	-	L07557 NM_130838	-304775	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	152929	-	AB051358 TSC_hg19_v1_chr15_-_26108932	153476	-	AK295167 NM_001191321 TSC_hg19_v1_chr15_-_26874238 BC038837	918856	-	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##AB051358|ATP10A|57194|ATPase, class V, type 10A##AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	0.999084	CTCF.p2:13:0.999
chr2	89347992	89348115	reg1018611.p1	7.429	+	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	-55640	-	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	-162963	+	S49006 TSC_hg19_v1_chr2_-_89165772	-182341	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	94536	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	165180	-	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	271800	-	AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##BC070336|IGKC|3514|immunoglobulin kappa constant##BC070334|IGKC|3514|immunoglobulin kappa constant	0.998223	CTCF.p2:15:0.998
chr8	98465060	98465173	reg1016349.p1	7.429	+	TSC_hg19_v1_chr8_-_98290193 AK091445 AX746987	-174897	-	TSC_hg19_v1_chr8_-_98290171 BC045630 NM_033512	-174943	-	CU692280 AB384285 AB051537 TSC_hg19_v1_chr8_-_98290135	-175008	-	TSC_hg19_v1_chr8_+_98656416 BC045642 NM_178812 BC001815	191261	+	TSC_hg19_v1_chr8_+_98656437 BC014977 AF501310	191343	+	BC022825 TSC_hg19_v1_chr8_+_98656510 BC009324 AF411226 AY082966 AY974040	191497	+	AK091445|TSPYL5|85453|TSPY-like 5##BC045630|TSPYL5|85453|TSPY-like 5##NM_033512|TSPYL5|85453|TSPY-like 5##AB051537|TSPYL5|85453|TSPY-like 5##BC045642|MTDH|92140|metadherin##NM_178812|MTDH|92140|metadherin##BC001815|MTDH|92140|metadherin##BC014977|MTDH|92140|metadherin##AF501310|MTDH|92140|metadherin##BC022825|MTDH|92140|metadherin##BC009324|MTDH|92140|metadherin##AF411226|MTDH|92140|metadherin##AY082966|MTDH|92140|metadherin##AY974040|MTDH|92140|metadherin	0.912038	CTCF.p2:-25:0.912
chr12	49330297	49330427	reg1019045.p1	7.428	+	DQ892057 DQ895251 AF238079 BC027973 AY358998 BC048292 AK301455 TSC_hg19_v1_chr12_-_49319304 NM_001143782 NM_016594	-11092	-	NM_001143781	-11699	-	NM_033124 AK302082 AK093051 AX747886 AF382188 AK314623 BC039317	-32440	+	BC017565 TSC_hg19_v1_chr12_-_49351236 BC007647 BC007762	20820	-	AK303726 AK309899 TSC_hg19_v1_chr12_-_49351242 AK316528	20880	-	TSC_hg19_v1_chr12_-_49351248 AK291633 AK315970 BC028402	20885	-	DQ892057|FKBP11|51303|FK506 binding protein 11, 19 kDa##DQ895251|FKBP11|51303|FK506 binding protein 11, 19 kDa##AF238079|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC027973|FKBP11|51303|FK506 binding protein 11, 19 kDa##AY358998|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC048292|FKBP11|51303|FK506 binding protein 11, 19 kDa##AK301455|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_001143782|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_016594|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_001143781|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_033124|CCDC65|85478|coiled-coil domain containing 65##AK302082|CCDC65|85478|coiled-coil domain containing 65##AK093051|CCDC65|85478|coiled-coil domain containing 65##AF382188|CCDC65|85478|coiled-coil domain containing 65##AK314623|CCDC65|85478|coiled-coil domain containing 65##BC039317|CCDC65|85478|coiled-coil domain containing 65##BC017565|ARF3|377|ADP-ribosylation factor 3##BC007647|ARF3|377|ADP-ribosylation factor 3##BC007762|ARF3|377|ADP-ribosylation factor 3##AK303726|ARF3|377|ADP-ribosylation factor 3##AK316528|ARF3|377|ADP-ribosylation factor 3##AK291633|ARF3|377|ADP-ribosylation factor 3##BC028402|ARF3|377|ADP-ribosylation factor 3	0.999829	CTCF.p2:-2:1.000
chr4	71601803	71601901	reg1017793.p1	7.428	+	TSC_hg19_v1_chr4_+_71587713 NM_001037442 NM_014961 BC051716 BC053837 BC098433 AB020678 BC071988	-14132	+	BC030809 TSC_hg19_v1_chr4_-_71571018	-30854	-	TSC_hg19_v1_chr4_+_71570768 AK000911 AF112221	-31033	+	AK094806 NM_001098477	103351	-	TSC_hg19_v1_chr4_-_71705608 U07231 AK127161 AK090755 AK055499 AK056891 AK095799 AK097055 AK124124 BC040485	103725	-	TSC_hg19_v1_chr4_-_71705615 NM_002092 AK296287	103785	-	NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3##NM_014961|RUFY3|22902|RUN and FYVE domain containing 3##BC051716|RUFY3|22902|RUN and FYVE domain containing 3##BC053837|RUFY3|22902|RUN and FYVE domain containing 3##BC098433|RUFY3|22902|RUN and FYVE domain containing 3##AB020678|RUFY3|22902|RUN and FYVE domain containing 3##BC071988|RUFY3|22902|RUN and FYVE domain containing 3##BC030809|LOC641510|641510|uncharacterized LOC641510##AK000911|RUFY3|22902|RUN and FYVE domain containing 3##AF112221|RUFY3|22902|RUN and FYVE domain containing 3##AK094806|GRSF1|2926|G-rich RNA sequence binding factor 1##NM_001098477|GRSF1|2926|G-rich RNA sequence binding factor 1##U07231|GRSF1|2926|G-rich RNA sequence binding factor 1##AK127161|GRSF1|2926|G-rich RNA sequence binding factor 1##AK090755|GRSF1|2926|G-rich RNA sequence binding factor 1##AK055499|GRSF1|2926|G-rich RNA sequence binding factor 1##AK056891|GRSF1|2926|G-rich RNA sequence binding factor 1##AK095799|GRSF1|2926|G-rich RNA sequence binding factor 1##AK097055|GRSF1|2926|G-rich RNA sequence binding factor 1##AK124124|GRSF1|2926|G-rich RNA sequence binding factor 1##BC040485|GRSF1|2926|G-rich RNA sequence binding factor 1##NM_002092|GRSF1|2926|G-rich RNA sequence binding factor 1##AK296287|GRSF1|2926|G-rich RNA sequence binding factor 1	0.499078	CTCF.p2:-7:0.499
chr11	2023344	2023518	reg1018505.p1	7.427	+	TSC_hg19_v1_chr11_-_2019073 AK056774 AK092486 AK309887 AK311497	-4360	-	BC040073 TSC_hg19_v1_chr11_-_2019016	-4420	-	BC002550 TSC_hg19_v1_chr11_-_2018986 BC040852	-4491	-	TSC_hg19_v1_chr11_-_2152963 AF318382	129531	-	TSC_hg19_v1_chr11_-_2156727 AB528666 BT007013 CU674260 DQ892721 DQ895970	133305	-	S51971 TSC_hg19_v1_chr11_-_2158501	135073	-	AK056774|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AK092486|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC040073|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC002550|RPS12|6206|ribosomal protein S12##BC040852|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AF318382|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##BT007013|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ892721|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ895970|IGF2|3481|insulin-like growth factor 2 (somatomedin A)	0.0	
chr17	26973981	26974118	reg1020955.p1	7.427	+	AB621823 TSC_hg19_v1_chr17_-_26972175 NM_014680	-1863	-	TSC_hg19_v1_chr17_-_26972167 BC050440	-1880	-	AK307216 TSC_hg19_v1_chr17_-_26972166	-1884	-	TSC_hg19_v1_chr17_-_26988925 BT006709 CR456708 DQ891990 DQ895180 CU674240 BC000500 BC001406 AK310890 D50645	14867	-	TSC_hg19_v1_chr17_-_26989199 NM_006923	15147	-	TSC_hg19_v1_chr17_+_26989222 AL833607	15160	+	NM_014680|KIAA0100|9703|KIAA0100##BC050440|KIAA0100|9703|KIAA0100##AK307216|KIAA0100|9703|KIAA0100##BT006709|SDF2|6388|stromal cell-derived factor 2##CR456708|SDF2|6388|stromal cell-derived factor 2##DQ891990|SDF2|6388|stromal cell-derived factor 2##DQ895180|SDF2|6388|stromal cell-derived factor 2##BC000500|SDF2|6388|stromal cell-derived factor 2##BC001406|SDF2|6388|stromal cell-derived factor 2##AK310890|SDF2|6388|stromal cell-derived factor 2##D50645|SDF2|6388|stromal cell-derived factor 2##NM_006923|SDF2|6388|stromal cell-derived factor 2##AL833607|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)	0.995251	CTCF.p2:-8:0.995
chr19	32868142	32868259	reg1018907.p2	7.427	+	TSC_hg19_v1_chr19_+_32836524 NM_001136156 NM_014910 AK292526 AB029007 BX640881 BC136417 AL713775	-31638	+	FJ211597 NM_001205273	-785014	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	-1027853	-	TSC_hg19_v1_chr19_-_32896476 BC000922	28292	-	TSC_hg19_v1_chr19_+_32896675 NM_001172774 AK129497 AF533711 BC029162	28413	+	NM_207325 TSC_hg19_v1_chr19_+_32897021 AK126757 AF533710	28857	+	NM_001136156|ZNF507|22847|zinc finger protein 507##NM_014910|ZNF507|22847|zinc finger protein 507##AK292526|ZNF507|22847|zinc finger protein 507##AB029007|ZNF507|22847|zinc finger protein 507##BX640881|ZNF507|22847|zinc finger protein 507##BC136417|ZNF507|22847|zinc finger protein 507##AL713775|ZNF507|22847|zinc finger protein 507##FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##BC000922|LOC400684|400684|uncharacterized LOC400684##NM_001172774|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AK129497|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AF533711|DPY19L3|147991|dpy-19-like 3 (C. elegans)##BC029162|DPY19L3|147991|dpy-19-like 3 (C. elegans)##NM_207325|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AK126757|DPY19L3|147991|dpy-19-like 3 (C. elegans)##AF533710|DPY19L3|147991|dpy-19-like 3 (C. elegans)	0.830069	CTCF.p2:16:0.830
chr19	49610038	49610163	reg1021708.p1	7.427	+	TSC_hg19_v1_chr19_+_49607925 X06814	-2154	+	TSC_hg19_v1_chr19_+_49588833 X06813	-21267	+	TSC_hg19_v1_chr19_+_49588717 BC001315 M22636 X06815	-21353	+	TSC_hg19_v1_chr19_+_49617626 AY358744 NM_022165	7518	+	TSC_hg19_v1_chr19_+_49617635 BC027618 AF311862 AB528696	7545	+	CU690794 BC051004 AK001352 BC069669 BC069693 BC069712 BC069750 NM_018111	12237	-	X06814|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##X06813|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##BC001315|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##M22636|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##X06815|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##AY358744|LIN7B|64130|lin-7 homolog B (C. elegans)##NM_022165|LIN7B|64130|lin-7 homolog B (C. elegans)##BC027618|LIN7B|64130|lin-7 homolog B (C. elegans)##AF311862|LIN7B|64130|lin-7 homolog B (C. elegans)##BC051004|C19orf73|55150|chromosome 19 open reading frame 73##AK001352|C19orf73|55150|chromosome 19 open reading frame 73##BC069669|C19orf73|55150|chromosome 19 open reading frame 73##BC069693|C19orf73|55150|chromosome 19 open reading frame 73##BC069712|C19orf73|55150|chromosome 19 open reading frame 73##BC069750|C19orf73|55150|chromosome 19 open reading frame 73##NM_018111|C19orf73|55150|chromosome 19 open reading frame 73	0.998098	CTCF.p2:5:0.998
chr6	33679561	33679686	reg1017938.p2	7.427	+	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	-110	-	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	-160	-	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	-90429	+	AK056586 AK223572 AK289935 BC089389 NM_001142883 NM_054111	35098	-	AK301083 NM_001143944	75092	-	TSC_hg19_v1_chr6_-_33756897 BC051803	77268	-	AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##AK056586|IP6K3|117283|inositol hexakisphosphate kinase 3##AK223572|IP6K3|117283|inositol hexakisphosphate kinase 3##AK289935|IP6K3|117283|inositol hexakisphosphate kinase 3##BC089389|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_001142883|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_054111|IP6K3|117283|inositol hexakisphosphate kinase 3##AK301083|LEMD2|221496|LEM domain containing 2##NM_001143944|LEMD2|221496|LEM domain containing 2##BC051803|LEMD2|221496|LEM domain containing 2	0.0	
chr11	95582371	95582485	reg1019663.p1	7.426	+	D42054 BC039711 BC029385 AB385276 AY225092 CU691748 TSC_hg19_v1_chr11_+_95523869	-58588	+	TSC_hg19_v1_chr11_+_95523702 NM_001243776 NM_001243777 NM_014679 BC001233 AK291245 AK293277 AK098647 BC031048 AY239292	-58753	+	AK021591 TSC_hg19_v1_chr11_-_95522975 BC026013 NM_144664	-59462	-	AK293243 TSC_hg19_v1_chr11_-_95657092 AK302940 BC040432 AK291277	74623	-	BC052990 BC012086 TSC_hg19_v1_chr11_-_95657272 BC034474 BX647997 NM_001243571 NM_016156 NM_201278 NM_201281 AB028996	74928	-	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	493975	-	D42054|CEP57|9702|centrosomal protein 57kDa##BC039711|CEP57|9702|centrosomal protein 57kDa##BC029385|CEP57|9702|centrosomal protein 57kDa##AY225092|CEP57|9702|centrosomal protein 57kDa##NM_001243776|CEP57|9702|centrosomal protein 57kDa##NM_001243777|CEP57|9702|centrosomal protein 57kDa##NM_014679|CEP57|9702|centrosomal protein 57kDa##BC001233|CEP57|9702|centrosomal protein 57kDa##AK291245|CEP57|9702|centrosomal protein 57kDa##AK293277|CEP57|9702|centrosomal protein 57kDa##AK098647|CEP57|9702|centrosomal protein 57kDa##BC031048|CEP57|9702|centrosomal protein 57kDa##AY239292|CEP57|9702|centrosomal protein 57kDa##AK021591|FAM76B|143684|family with sequence similarity 76, member B##BC026013|FAM76B|143684|family with sequence similarity 76, member B##NM_144664|FAM76B|143684|family with sequence similarity 76, member B##AK293243|MTMR2|8898|myotubularin related protein 2##AK302940|MTMR2|8898|myotubularin related protein 2##BC040432|MTMR2|8898|myotubularin related protein 2##AK291277|MTMR2|8898|myotubularin related protein 2##BC052990|MTMR2|8898|myotubularin related protein 2##BC012086|MTMR2|8898|myotubularin related protein 2##BC034474|MTMR2|8898|myotubularin related protein 2##BX647997|MTMR2|8898|myotubularin related protein 2##NM_001243571|MTMR2|8898|myotubularin related protein 2##NM_016156|MTMR2|8898|myotubularin related protein 2##NM_201278|MTMR2|8898|myotubularin related protein 2##NM_201281|MTMR2|8898|myotubularin related protein 2##AB028996|MTMR2|8898|myotubularin related protein 2##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)	0.989466	CTCF.p2:-10:0.989
chr17	38759227	38759407	reg1017478.p1	7.425	+	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	-37599	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	-101471	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-159498	+	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	44753	-	BC069196 TSC_hg19_v1_chr17_-_38804818	45479	-	BX538083 EU832123 EU832217 BC032815 AK092967 AK308598 NM_152349	62033	-	BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC069196|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BX538083|KRT222|125113|keratin 222##EU832123|KRT222|125113|keratin 222##EU832217|KRT222|125113|keratin 222##BC032815|KRT222|125113|keratin 222##AK308598|KRT222|125113|keratin 222##NM_152349|KRT222|125113|keratin 222	0.0	
chr19	40970362	40970498	reg1017413.p1	7.425	+	TSC_hg19_v1_chr19_-_40950243 BC050643 NM_203344	-20171	-	TSC_hg19_v1_chr19_-_40950200 BC014061 AK074604	-20219	-	AF192529 NM_013368	-21926	-	TSC_hg19_v1_chr19_-_40971653 BC109371 AK312137 D26308 NM_000713	1245	-	AF082075 AF311855 NM_020971	2657	+	TSC_hg19_v1_chr19_+_41036379 AF311856 NM_025213	65950	+	BC050643|SERTAD3|29946|SERTA domain containing 3##NM_203344|SERTAD3|29946|SERTA domain containing 3##BC014061|SERTAD3|29946|SERTA domain containing 3##AK074604|SERTAD3|29946|SERTA domain containing 3##AF192529|SERTAD3|29946|SERTA domain containing 3##NM_013368|SERTAD3|29946|SERTA domain containing 3##BC109371|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##AK312137|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##D26308|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##NM_000713|BLVRB|645|biliverdin reductase B (flavin reductase (NADPH))##AF082075|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AF311855|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_020971|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##AF311856|SPTBN4|57731|spectrin, beta, non-erythrocytic 4##NM_025213|SPTBN4|57731|spectrin, beta, non-erythrocytic 4	0.010405	
chr1	102657424	102657528	reg1019342.p1	7.424	+	NM_058170 TSC_hg19_v1_chr1_-_102462791	-194686	-	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	-194989	-	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-954906	+	AB208844 TSC_hg19_v1_chr1_-_103496798	839307	-	J04177 TSC_hg19_v1_chr1_-_103574032 BC117697	916495	-	NM_001190709 NM_001854 NM_080629 NM_080630 TSC_hg19_v1_chr1_-_103574051	916575	-	NM_058170|OLFM3|118427|olfactomedin 3##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##AB208844|COL11A1|1301|collagen, type XI, alpha 1##J04177|COL11A1|1301|collagen, type XI, alpha 1##BC117697|COL11A1|1301|collagen, type XI, alpha 1##NM_001190709|COL11A1|1301|collagen, type XI, alpha 1##NM_001854|COL11A1|1301|collagen, type XI, alpha 1##NM_080629|COL11A1|1301|collagen, type XI, alpha 1##NM_080630|COL11A1|1301|collagen, type XI, alpha 1	0.305863	CTCF.p2:14:0.306
chr12	88787298	88787454	reg1020105.p2	7.423	+	TSC_hg19_v1_chr12_+_88536083 AK290436 AK302755 AK310375 AK310393 NM_181783 CR749309 BX538169 CR749244 CR933632 AJ697717 BC117177 BC117175	-251228	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	-251507	-	TSC_hg19_v1_chr12_+_88429312 AK095477 NM_001009894 CR936776 AK311222 BC058014 BX640968 BX537868 BX648026 AK311153 BC035136 BC092422 AB590923 AM392924 AL137488	-357990	+	BC074725 AK293002 AF119835 AF400437 BC126166 BC143899 BC069797 BC069733 BC069783 TSC_hg19_v1_chr12_-_88974249 AF400436 M59964 AK290319 NM_000899 NM_003994	186796	-	TSC_hg19_v1_chr12_+_89744716 AK124265	957376	+	TSC_hg19_v1_chr12_-_89745782 AB451265 AB451393 BT006895 CU678402 AB463588 DQ892490 DQ895701	958409	-	AK290436|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK302755|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310375|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310393|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##NM_181783|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749309|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BX538169|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749244|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR933632|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AJ697717|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117177|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117175|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa##AK095477|C12orf29|91298|chromosome 12 open reading frame 29##NM_001009894|C12orf29|91298|chromosome 12 open reading frame 29##CR936776|C12orf29|91298|chromosome 12 open reading frame 29##AK311222|C12orf29|91298|chromosome 12 open reading frame 29##BC058014|C12orf29|91298|chromosome 12 open reading frame 29##BX640968|C12orf29|91298|chromosome 12 open reading frame 29##BX537868|C12orf29|91298|chromosome 12 open reading frame 29##BX648026|C12orf29|91298|chromosome 12 open reading frame 29##AK311153|C12orf29|91298|chromosome 12 open reading frame 29##BC035136|C12orf29|91298|chromosome 12 open reading frame 29##BC092422|C12orf29|91298|chromosome 12 open reading frame 29##AM392924|C12orf29|91298|chromosome 12 open reading frame 29##AL137488|C12orf29|91298|chromosome 12 open reading frame 29##BC074725|KITLG|4254|KIT ligand##AK293002|KITLG|4254|KIT ligand##AF119835|KITLG|4254|KIT ligand##AF400437|KITLG|4254|KIT ligand##BC126166|KITLG|4254|KIT ligand##BC143899|KITLG|4254|KIT ligand##BC069797|KITLG|4254|KIT ligand##BC069733|KITLG|4254|KIT ligand##BC069783|KITLG|4254|KIT ligand##AF400436|KITLG|4254|KIT ligand##M59964|KITLG|4254|KIT ligand##AK290319|KITLG|4254|KIT ligand##NM_000899|KITLG|4254|KIT ligand##NM_003994|KITLG|4254|KIT ligand##AK124265|LOC100131490|100131490|uncharacterized LOC100131490##AB451265|DUSP6|1848|dual specificity phosphatase 6##AB451393|DUSP6|1848|dual specificity phosphatase 6##BT006895|DUSP6|1848|dual specificity phosphatase 6##DQ892490|DUSP6|1848|dual specificity phosphatase 6##DQ895701|DUSP6|1848|dual specificity phosphatase 6	0.620018	CTCF.p2:-7:0.620
chr10	99930394	99930536	reg1022182.p1	7.422	+	TSC_hg19_v1_chr10_+_99894427 AF525304 BC047908 BC098175 BC098268 BC098359 BC099848	-36030	+	NM_014472 AK292546 TSC_hg19_v1_chr10_+_99894414	-36068	+	AK057190 NM_001206528 NM_018058	-139881	-	TSC_hg19_v1_chr10_-_100027952 AK172781 BC013153 BC035470 NM_032211	97527	-	CU675263 DQ893418 DQ896787 AK075265 TSC_hg19_v1_chr10_-_100174919 AK225637 AK074429 BC006131 AK295699 NM_032709	244469	-	BC002514 TSC_hg19_v1_chr10_-_100206650	276181	-	AF525304|C10orf28|27291|chromosome 10 open reading frame 28##BC047908|C10orf28|27291|chromosome 10 open reading frame 28##BC098175|C10orf28|27291|chromosome 10 open reading frame 28##BC098268|C10orf28|27291|chromosome 10 open reading frame 28##BC098359|C10orf28|27291|chromosome 10 open reading frame 28##BC099848|C10orf28|27291|chromosome 10 open reading frame 28##NM_014472|C10orf28|27291|chromosome 10 open reading frame 28##AK292546|C10orf28|27291|chromosome 10 open reading frame 28##AK057190|CRTAC1|55118|cartilage acidic protein 1##NM_001206528|CRTAC1|55118|cartilage acidic protein 1##NM_018058|CRTAC1|55118|cartilage acidic protein 1##AK172781|LOXL4|84171|lysyl oxidase-like 4##BC013153|LOXL4|84171|lysyl oxidase-like 4##BC035470|LOXL4|84171|lysyl oxidase-like 4##NM_032211|LOXL4|84171|lysyl oxidase-like 4##DQ893418|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##DQ896787|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK075265|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK225637|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK074429|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##BC006131|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK295699|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##NM_032709|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1	1.034493	CTCF.p2:-4:0.978
chr1	238014686	238014790	reg1018537.p1	7.422	+	NM_001035 X98330 Y08218	-808965	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-1055903	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	-1056161	+	AK314151 NM_021186	39483	-	TSC_hg19_v1_chr1_+_239550016 AK056349	1535204	+	AF279779 NM_000740	1777634	+	NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3	0.985879	CTCF.p2:-17:0.986
chr14	51240453	51240609	reg1020826.p1	7.422	+	TSC_hg19_v1_chr14_-_51135048 AK225896 AK095903	-105463	-	BC020537 TSC_hg19_v1_chr14_-_51135025 BC006385 NM_021818 AK021500	-105505	-	AJ292969 AK023071 TSC_hg19_v1_chr14_-_51135016 AK290883	-105591	-	AB046785 TSC_hg19_v1_chr14_-_51297860 BC065521 AF223937 AF223938 AF223939 AF302773 AY736182 NM_016350 NM_020921 NM_182944 NM_182946	57289	-	AY311396 AY311397 AY311398 AY311399 BC107141 NM_001206673 NM_181814 BC107142 AK128464	98347	+	AF046785 AF066858 TSC_hg19_v1_chr14_-_51411202 AK313206 Y15233 AK309333 BC065011 BC110791 BC009895 BC082229 AK225904 AK300580 BC095850 M14636 NM_001163940 NM_002863	170651	-	AK225896|SAV1|60485|salvador homolog 1 (Drosophila)##AK095903|SAV1|60485|salvador homolog 1 (Drosophila)##BC020537|SAV1|60485|salvador homolog 1 (Drosophila)##BC006385|SAV1|60485|salvador homolog 1 (Drosophila)##NM_021818|SAV1|60485|salvador homolog 1 (Drosophila)##AK021500|SAV1|60485|salvador homolog 1 (Drosophila)##AJ292969|SAV1|60485|salvador homolog 1 (Drosophila)##AK023071|SAV1|60485|salvador homolog 1 (Drosophila)##AK290883|SAV1|60485|salvador homolog 1 (Drosophila)##AB046785|NIN|51199|ninein (GSK3B interacting protein)##BC065521|NIN|51199|ninein (GSK3B interacting protein)##AF223937|NIN|51199|ninein (GSK3B interacting protein)##AF223938|NIN|51199|ninein (GSK3B interacting protein)##AF223939|NIN|51199|ninein (GSK3B interacting protein)##AF302773|NIN|51199|ninein (GSK3B interacting protein)##AY736182|NIN|51199|ninein (GSK3B interacting protein)##NM_016350|NIN|51199|ninein (GSK3B interacting protein)##NM_020921|NIN|51199|ninein (GSK3B interacting protein)##NM_182944|NIN|51199|ninein (GSK3B interacting protein)##NM_182946|NIN|51199|ninein (GSK3B interacting protein)##AY311396|ABHD12B|145447|abhydrolase domain containing 12B##AY311397|ABHD12B|145447|abhydrolase domain containing 12B##AY311398|ABHD12B|145447|abhydrolase domain containing 12B##AY311399|ABHD12B|145447|abhydrolase domain containing 12B##BC107141|ABHD12B|145447|abhydrolase domain containing 12B##NM_001206673|ABHD12B|145447|abhydrolase domain containing 12B##NM_181814|ABHD12B|145447|abhydrolase domain containing 12B##BC107142|ABHD12B|145447|abhydrolase domain containing 12B##AK128464|ABHD12B|145447|abhydrolase domain containing 12B##AF046785|PYGL|5836|phosphorylase, glycogen, liver##AF066858|PYGL|5836|phosphorylase, glycogen, liver##AK313206|PYGL|5836|phosphorylase, glycogen, liver##Y15233|PYGL|5836|phosphorylase, glycogen, liver##AK309333|PYGL|5836|phosphorylase, glycogen, liver##BC065011|PYGL|5836|phosphorylase, glycogen, liver##BC110791|PYGL|5836|phosphorylase, glycogen, liver##BC009895|PYGL|5836|phosphorylase, glycogen, liver##BC082229|PYGL|5836|phosphorylase, glycogen, liver##AK225904|PYGL|5836|phosphorylase, glycogen, liver##AK300580|PYGL|5836|phosphorylase, glycogen, liver##BC095850|PYGL|5836|phosphorylase, glycogen, liver##M14636|PYGL|5836|phosphorylase, glycogen, liver##NM_001163940|PYGL|5836|phosphorylase, glycogen, liver##NM_002863|PYGL|5836|phosphorylase, glycogen, liver	0.329462	CTCF.p2:-31:0.202
chr2	106607196	106607330	reg1019977.p1	7.422	+	NM_001004720 BC000103	-139002	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	-174288	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	-245720	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	74901	+	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	203482	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	203495	-	NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1	0.370593	CTCF.p2:24:0.371
chr3	37856130	37856278	reg1018883.p1	7.422	+	TSC_hg19_v1_chr3_+_37493631 BC030198 D25303 NM_002207 L24158	-362450	+	NM_178339 NM_178342 AJ493604 AJ493603	-415190	+	TSC_hg19_v1_chr3_+_37284761 BC045543 NM_001172713 NM_002078 BC050444 AK290550 BC023648 AK300192 AK307429 AB209693 U41740 X82834	-571441	+	TSC_hg19_v1_chr3_+_37903656 AJ575644 AJ575645 NM_001008392 NM_005808 AY279532 AY364238	47462	+	TSC_hg19_v1_chr3_+_38032276 BC004300	176072	+	NM_015873	178873	+	BC030198|ITGA9|3680|integrin, alpha 9##D25303|ITGA9|3680|integrin, alpha 9##NM_002207|ITGA9|3680|integrin, alpha 9##L24158|ITGA9|3680|integrin, alpha 9##NM_178339|C3orf35|339883|chromosome 3 open reading frame 35##NM_178342|C3orf35|339883|chromosome 3 open reading frame 35##AJ493604|C3orf35|339883|chromosome 3 open reading frame 35##AJ493603|C3orf35|339883|chromosome 3 open reading frame 35##BC045543|GOLGA4|2803|golgin A4##NM_001172713|GOLGA4|2803|golgin A4##NM_002078|GOLGA4|2803|golgin A4##BC050444|GOLGA4|2803|golgin A4##AK290550|GOLGA4|2803|golgin A4##BC023648|GOLGA4|2803|golgin A4##AK300192|GOLGA4|2803|golgin A4##AK307429|GOLGA4|2803|golgin A4##AB209693|GOLGA4|2803|golgin A4##U41740|GOLGA4|2803|golgin A4##X82834|GOLGA4|2803|golgin A4##AJ575644|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AJ575645|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_001008392|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_005808|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY279532|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY364238|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##BC004300|VILL|50853|villin-like##NM_015873|VILL|50853|villin-like	0.985575	CTCF.p2:27:0.986
chr5	170634426	170634543	reg1018080.p2	7.422	+	TSC_hg19_v1_chr5_+_170289029 AJ271459 AJ288952 AJ288953 AJ288954 AJ288955 BC030953 AF222747 AB527205 AL832980	-345462	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	-345553	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	-423730	+	BC017291 NM_021025 DQ892654 DQ895893 DQ896085	101844	+	NM_001037738 NM_002520 NM_199185 TSC_hg19_v1_chr5_+_170814855 D28343 AK290652 BC008495 BC107754 BC012566 BC021668 DQ303464 BC016716 BC016768 BC016824 BC021983 BC014349 BC002398 M23613 M26697 BC020467 BC050628 M28699 AY740634 AY740635 AY740636 AY740637 AY740638 AY740639 AY740640 BC063542	180313	+	AB042278 AB451236 AB451361 AB463949 BT007011 CU676967 CU677717 CU680364 CU692436 DQ892032 DQ895223 EF429251 X16934 TSC_hg19_v1_chr5_+_170815031	180507	+	AJ271459|RANBP17|64901|RAN binding protein 17##AJ288952|RANBP17|64901|RAN binding protein 17##AJ288953|RANBP17|64901|RAN binding protein 17##AJ288954|RANBP17|64901|RAN binding protein 17##AJ288955|RANBP17|64901|RAN binding protein 17##BC030953|RANBP17|64901|RAN binding protein 17##AF222747|RANBP17|64901|RAN binding protein 17##AL832980|RANBP17|64901|RAN binding protein 17##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17##AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC017291|TLX3|30012|T-cell leukemia homeobox 3##NM_021025|TLX3|30012|T-cell leukemia homeobox 3##DQ892654|TLX3|30012|T-cell leukemia homeobox 3##DQ895893|TLX3|30012|T-cell leukemia homeobox 3##DQ896085|TLX3|30012|T-cell leukemia homeobox 3##NM_001037738|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##NM_002520|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##NM_199185|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##D28343|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AK290652|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC008495|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC107754|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC012566|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC021668|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ303464|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016716|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016768|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016824|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC021983|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC014349|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC002398|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M23613|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M26697|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC020467|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC050628|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M28699|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740634|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740635|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740636|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740637|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740638|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740639|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740640|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB042278|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451236|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451361|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BT007011|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ892032|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ895223|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##EF429251|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##X16934|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)	0.999285	CTCF.p2:0:0.999
chr10	100508196	100508295	reg1018876.p1	7.421	+	TSC_hg19_v1_chr10_-_100206705 NM_000195 NM_182639	-301534	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	-301570	-	BC002514 TSC_hg19_v1_chr10_-_100206650	-301599	-	AJ299720 AK094037 BC112356 AF282885 AF282886 AF282887 AJ299719 AK314759 NM_001166244 NM_001166245 NM_001166246 NM_021828	487349	-	TSC_hg19_v1_chr10_+_101088794 NM_020348	580579	+	TSC_hg19_v1_chr10_+_101089114 AK308618	580881	+	NM_000195|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_182639|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1##AJ299720|HPSE2|60495|heparanase 2##AK094037|HPSE2|60495|heparanase 2##BC112356|HPSE2|60495|heparanase 2##AF282885|HPSE2|60495|heparanase 2##AF282886|HPSE2|60495|heparanase 2##AF282887|HPSE2|60495|heparanase 2##AJ299719|HPSE2|60495|heparanase 2##AK314759|HPSE2|60495|heparanase 2##NM_001166244|HPSE2|60495|heparanase 2##NM_001166245|HPSE2|60495|heparanase 2##NM_001166246|HPSE2|60495|heparanase 2##NM_021828|HPSE2|60495|heparanase 2##NM_020348|CNNM1|26507|cyclin M1##AK308618|CNNM1|26507|cyclin M1	0.896114	CTCF.p2:-3:0.896
chr19	16296696	16296792	reg1018957.p3	7.421	+	TSC_hg19_v1_chr19_+_16296220 AK312058 BC000639 AL050157 NM_014077 BC017286 AF151902 AM393549 AM393669	-512	+	AB050868 BC069320 BC069428 BC069524 NM_054113 HQ258101 BC112200 BC113591	-12434	-	TSC_hg19_v1_chr19_+_16254533 AK027792 AK131222 AK300027 AK298682 AK307563 BC016826	-42242	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	12006	+	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	138897	+	AF134053 TSC_hg19_v1_chr19_+_16435803	139025	+	AK312058|FAM32A|26017|family with sequence similarity 32, member A##BC000639|FAM32A|26017|family with sequence similarity 32, member A##AL050157|FAM32A|26017|family with sequence similarity 32, member A##NM_014077|FAM32A|26017|family with sequence similarity 32, member A##BC017286|FAM32A|26017|family with sequence similarity 32, member A##AF151902|FAM32A|26017|family with sequence similarity 32, member A##AM393549|FAM32A|26017|family with sequence similarity 32, member A##AM393669|FAM32A|26017|family with sequence similarity 32, member A##AB050868|CIB3|117286|calcium and integrin binding family member 3##BC069320|CIB3|117286|calcium and integrin binding family member 3##BC069428|CIB3|117286|calcium and integrin binding family member 3##BC069524|CIB3|117286|calcium and integrin binding family member 3##NM_054113|CIB3|117286|calcium and integrin binding family member 3##HQ258101|CIB3|117286|calcium and integrin binding family member 3##BC112200|CIB3|117286|calcium and integrin binding family member 3##BC113591|CIB3|117286|calcium and integrin binding family member 3##AK027792|HSH2D|84941|hematopoietic SH2 domain containing##AK131222|HSH2D|84941|hematopoietic SH2 domain containing##AK300027|HSH2D|84941|hematopoietic SH2 domain containing##AK298682|HSH2D|84941|hematopoietic SH2 domain containing##AK307563|HSH2D|84941|hematopoietic SH2 domain containing##BC016826|HSH2D|84941|hematopoietic SH2 domain containing##AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)##AF134053|KLF2|10365|Kruppel-like factor 2 (lung)	0.280769	CTCF.p2:-5:0.219
chr19	45634437	45634536	reg1017191.p1	7.421	+	TSC_hg19_v1_chr19_+_45596436 NM_019121	-38064	+	TSC_hg19_v1_chr19_+_45596205 BC035704	-38271	+	TSC_hg19_v1_chr19_+_45582529 NM_001007270 NM_001007269 NM_024707 AK024018 BC007793	-51973	+	NM_198478	28921	-	TSC_hg19_v1_chr19_-_45681496 FJ418644 BC001907 NM_024108 BC004450 AF161407	46992	-	NM_212550 AK296695 TSC_hg19_v1_chr19_+_45682022	47527	+	NM_019121|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##BC035704|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##NM_001007270|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_001007269|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_024707|GEMIN7|79760|gem (nuclear organelle) associated protein 7##AK024018|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC007793|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_198478|NKPD1|284353|NTPase, KAP family P-loop domain containing 1##FJ418644|TRAPPC6A|79090|trafficking protein particle complex 6A##BC001907|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_024108|TRAPPC6A|79090|trafficking protein particle complex 6A##BC004450|TRAPPC6A|79090|trafficking protein particle complex 6A##AF161407|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_212550|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3##AK296695|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3	0.998573	CTCF.p2:9:0.999
chr8	120875356	120875464	reg1017624.p1	7.421	+	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	-7296	-	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	-30333	-	EU131011 DQ891628 DQ894819 D45421 L35594 AK315253 BC034961 TSC_hg19_v1_chr8_-_120651080 NM_001040092 NM_001130863 NM_006209	-224348	-	NM_022783 TSC_hg19_v1_chr8_+_120885965 AK315175 AK225168 AK297822 AL136678 AK225675 BC024746 AK022490 BC012040 AM392576 AM393333 AB527130 AK023916	10594	+	TSC_hg19_v1_chr8_+_121137341 NM_021110 Y11709 AK293080 AK307716 AK311498	261945	+	CU692406 DQ893117 DQ893487 DQ896395 AK307322 TSC_hg19_v1_chr8_-_121457370 AB049640 AF112214 BC009190	581945	-	DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##EU131011|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ891628|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ894819|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##D45421|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##L35594|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##AK315253|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC034961|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001040092|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001130863|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_006209|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein##NM_021110|COL14A1|7373|collagen, type XIV, alpha 1##Y11709|COL14A1|7373|collagen, type XIV, alpha 1##AK293080|COL14A1|7373|collagen, type XIV, alpha 1##AK307716|COL14A1|7373|collagen, type XIV, alpha 1##AK311498|COL14A1|7373|collagen, type XIV, alpha 1##DQ893117|MRPL13|28998|mitochondrial ribosomal protein L13##DQ893487|MRPL13|28998|mitochondrial ribosomal protein L13##DQ896395|MRPL13|28998|mitochondrial ribosomal protein L13##AK307322|MRPL13|28998|mitochondrial ribosomal protein L13##AB049640|MRPL13|28998|mitochondrial ribosomal protein L13##AF112214|MRPL13|28998|mitochondrial ribosomal protein L13##BC009190|MRPL13|28998|mitochondrial ribosomal protein L13	0.992874	CTCF.p2:7:0.993
chrX	130956401	130956561	reg1018998.p2	7.421	+	BC137050 AB529233 NM_001004486	-278483	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-533069	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-533219	-	TSC_hg19_v1_chrX_-_130964633 AK097911	8170	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	200840	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	201159	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.042628	
chr15	77926897	77926997	reg1001542.p3	7.420	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-2167	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-2248	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-213685	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	443006	-	NM_001101404	457979	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	496815	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.995106	CTCF.p2:10:0.995
chr5	106583913	106584032	reg1018319.p2	7.420	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-3685491	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-3989515	+	BC024591 NM_015216 AB463068	-4118698	+	AK308672 NM_001962 U26403	422618	-	TSC_hg19_v1_chr5_-_107717106 AK126722	1133158	-	BC063316 NM_001163315	1133826	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.998888	CTCF.p2:-8:0.999
chr12	65626403	65626543	reg1017619.p1	7.419	+	TSC_hg19_v1_chr12_+_65563362 AK312473 NM_001167614 NM_014319 AK304317 AF112299	-63119	+	TSC_hg19_v1_chr12_-_65515349 NM_007191	-111123	-	AK301818 TSC_hg19_v1_chr12_-_65515286	-111192	-	NM_001031679 NM_001193460 NM_198080 TSC_hg19_v1_chr12_+_65672483 AK316365 AK293084 AK299065 AY358229 BX648776 AL833622 BC040053	46052	+	TSC_hg19_v1_chr12_+_65672705 NM_001193461	46251	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	591734	+	AK312473|LEMD3|23592|LEM domain containing 3##NM_001167614|LEMD3|23592|LEM domain containing 3##NM_014319|LEMD3|23592|LEM domain containing 3##AK304317|LEMD3|23592|LEM domain containing 3##AF112299|LEMD3|23592|LEM domain containing 3##NM_007191|WIF1|11197|WNT inhibitory factor 1##AK301818|WIF1|11197|WNT inhibitory factor 1##NM_001031679|MSRB3|253827|methionine sulfoxide reductase B3##NM_001193460|MSRB3|253827|methionine sulfoxide reductase B3##NM_198080|MSRB3|253827|methionine sulfoxide reductase B3##AK316365|MSRB3|253827|methionine sulfoxide reductase B3##AK293084|MSRB3|253827|methionine sulfoxide reductase B3##AK299065|MSRB3|253827|methionine sulfoxide reductase B3##AY358229|MSRB3|253827|methionine sulfoxide reductase B3##BX648776|MSRB3|253827|methionine sulfoxide reductase B3##AL833622|MSRB3|253827|methionine sulfoxide reductase B3##BC040053|MSRB3|253827|methionine sulfoxide reductase B3##NM_001193461|MSRB3|253827|methionine sulfoxide reductase B3##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2	0.165971	
chr13	49306244	49306371	reg1018943.p1	7.419	+	AB041947 AB038269 BC096832 BC069160 NM_020377 AB590816	-25522	+	AK122778 TSC_hg19_v1_chr13_-_49110119	-196189	-	AB209543 TSC_hg19_v1_chr13_-_49107365	-198943	-	TSC_hg19_v1_chr13_+_49550058 AJ749706 NM_001079673 BX648706 BX648141 AK056071	243853	+	TSC_hg19_v1_chr13_+_49550791 BC051029	244414	+	TSC_hg19_v1_chr13_+_49550938 BX640739	244618	+	AB041947|CYSLTR2|57105|cysteinyl leukotriene receptor 2##AB038269|CYSLTR2|57105|cysteinyl leukotriene receptor 2##BC096832|CYSLTR2|57105|cysteinyl leukotriene receptor 2##BC069160|CYSLTR2|57105|cysteinyl leukotriene receptor 2##NM_020377|CYSLTR2|57105|cysteinyl leukotriene receptor 2##AK122778|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AB209543|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AJ749706|FNDC3A|22862|fibronectin type III domain containing 3A##NM_001079673|FNDC3A|22862|fibronectin type III domain containing 3A##BX648706|FNDC3A|22862|fibronectin type III domain containing 3A##BX648141|FNDC3A|22862|fibronectin type III domain containing 3A##AK056071|FNDC3A|22862|fibronectin type III domain containing 3A##BC051029|FNDC3A|22862|fibronectin type III domain containing 3A##BX640739|FNDC3A|22862|fibronectin type III domain containing 3A	0.975955	CTCF.p2:0:0.976
chr19	18263449	18263629	reg1018022.p2	7.419	+	TSC_hg19_v1_chr19_+_18208608 AB527184 NM_015016 AB011133	-54930	+	EU832463 EU832545 BC137404 BC137406 NM_005535 NM_153701 U03187 BC029121 TSC_hg19_v1_chr19_-_18197721 AK225919 AK290423	-65807	-	TSC_hg19_v1_chr19_+_18118978 AF193051 NM_015683 AK000689 AK128588 BC022516 AK314657 AB529119	-144521	+	BC063240 TSC_hg19_v1_chr19_+_18263972	442	+	TSC_hg19_v1_chr19_+_18264004 BC070082 NM_005027 BC090249	493	+	NM_006332 TSC_hg19_v1_chr19_+_18284600 AB049659 AK291551	21052	+	NM_015016|MAST3|23031|microtubule associated serine/threonine kinase 3##AB011133|MAST3|23031|microtubule associated serine/threonine kinase 3##EU832463|IL12RB1|3594|interleukin 12 receptor, beta 1##EU832545|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137404|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137406|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_005535|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_153701|IL12RB1|3594|interleukin 12 receptor, beta 1##U03187|IL12RB1|3594|interleukin 12 receptor, beta 1##BC029121|IL12RB1|3594|interleukin 12 receptor, beta 1##AK225919|IL12RB1|3594|interleukin 12 receptor, beta 1##AK290423|IL12RB1|3594|interleukin 12 receptor, beta 1##AF193051|ARRDC2|27106|arrestin domain containing 2##NM_015683|ARRDC2|27106|arrestin domain containing 2##AK000689|ARRDC2|27106|arrestin domain containing 2##AK128588|ARRDC2|27106|arrestin domain containing 2##BC022516|ARRDC2|27106|arrestin domain containing 2##AK314657|ARRDC2|27106|arrestin domain containing 2##BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_006332|IFI30|10437|interferon, gamma-inducible protein 30##AB049659|IFI30|10437|interferon, gamma-inducible protein 30##AK291551|IFI30|10437|interferon, gamma-inducible protein 30	0.108331	
chr22	43456350	43456453	reg1017970.p2	7.419	+	TSC_hg19_v1_chr22_-_43411156 NM_001184970	-45224	-	TSC_hg19_v1_chr22_-_43411136 AF128536	-45262	-	AL136845 NM_001184971	-100515	-	TSC_hg19_v1_chr22_-_43485410 AF104927 AF173935 AK315658 BC009058 AK095996 BC014968 AL136687 NM_012263	28986	-	NM_001197 TSC_hg19_v1_chr22_+_43506755 BC001599 U49730 U34584	50371	+	TSC_hg19_v1_chr22_-_43539355 BC030985 AL359401 AL359403 AK314059	82951	-	NM_001184970|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF104927|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AF173935|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK315658|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC009058|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK095996|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC014968|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AL136687|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_012263|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_001197|BIK|638|BCL2-interacting killer (apoptosis-inducing)##BC001599|BIK|638|BCL2-interacting killer (apoptosis-inducing)##U49730|BIK|638|BCL2-interacting killer (apoptosis-inducing)##U34584|BIK|638|BCL2-interacting killer (apoptosis-inducing)##BC030985|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AL359401|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AL359403|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AK314059|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)	0.037657	
chr6	53583813	53583954	reg1019150.p1	7.419	+	EF633513 NM_001003760	-53378	-	TSC_hg19_v1_chr6_-_53409900 AK304288 NM_001197115 NM_001498	-173972	-	TSC_hg19_v1_chr6_-_53409836 AK313480	-174048	-	TSC_hg19_v1_chr6_+_53659294 AK021896	75417	+	TSC_hg19_v1_chr6_+_53659776 BC003193 NM_018214	75876	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	76048	+	EF633513|KLHL31|401265|kelch-like 31 (Drosophila)##NM_001003760|KLHL31|401265|kelch-like 31 (Drosophila)##AK304288|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001197115|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001498|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK313480|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK021896|LRRC1|55227|leucine rich repeat containing 1##BC003193|LRRC1|55227|leucine rich repeat containing 1##NM_018214|LRRC1|55227|leucine rich repeat containing 1##AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1	0.982823	CTCF.p2:-29:0.983
chr1	182023982	182024098	reg1019010.p1	7.418	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-571340	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-966175	+	NM_016545	-966403	+	BC137223 BC137224 AK128654 NM_001009992	6757	-	TSC_hg19_v1_chr1_-_182354649 AK301600	330642	-	TSC_hg19_v1_chr1_-_182357758 BC127883	333723	-	NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase	0.29223	CTCF.p2:-1:0.292
chr20	52679396	52679515	reg1018429.p1	7.418	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-468656	-	AF041259 NM_006526	-479820	-	AK302570 NM_001193421	-877634	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	7607	-	AK315220 NM_003657	7848	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	111065	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.973539	CTCF.p2:23:0.974
chrX	38079365	38079453	reg1022633.p2	7.418	+	NM_001163334	-186623	+	BX647688 NM_001163335 NM_138780 TSC_hg19_v1_chrX_+_37865853 AK125106	-213559	+	AF049615 NM_012274 BC104428 BC104429 BC113024 BC113025	-229329	+	TSC_hg19_v1_chrX_-_38080117 AB527644 CU676640 U61374 U78093 AK298802 AK289430 BC020684 AK293127 AK125542 NM_001170750 NM_001170751 NM_001170752 NM_006307	716	-	X97668 CU689206 AJ238395 U57629 TSC_hg19_v1_chrX_-_38186763 BC031624 AK223491 DQ980616	107286	-	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	107386	-	NM_001163334|SYTL5|94122|synaptotagmin-like 5##BX647688|SYTL5|94122|synaptotagmin-like 5##NM_001163335|SYTL5|94122|synaptotagmin-like 5##NM_138780|SYTL5|94122|synaptotagmin-like 5##AK125106|SYTL5|94122|synaptotagmin-like 5##AF049615|CXorf27|25763|chromosome X open reading frame 27##NM_012274|CXorf27|25763|chromosome X open reading frame 27##BC104428|CXorf27|25763|chromosome X open reading frame 27##BC104429|CXorf27|25763|chromosome X open reading frame 27##BC113024|CXorf27|25763|chromosome X open reading frame 27##BC113025|CXorf27|25763|chromosome X open reading frame 27##U61374|SRPX|8406|sushi-repeat containing protein, X-linked##U78093|SRPX|8406|sushi-repeat containing protein, X-linked##AK298802|SRPX|8406|sushi-repeat containing protein, X-linked##AK289430|SRPX|8406|sushi-repeat containing protein, X-linked##BC020684|SRPX|8406|sushi-repeat containing protein, X-linked##AK293127|SRPX|8406|sushi-repeat containing protein, X-linked##AK125542|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked##NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked##X97668|RPGR|6103|retinitis pigmentosa GTPase regulator##AJ238395|RPGR|6103|retinitis pigmentosa GTPase regulator##U57629|RPGR|6103|retinitis pigmentosa GTPase regulator##BC031624|RPGR|6103|retinitis pigmentosa GTPase regulator##AK223491|RPGR|6103|retinitis pigmentosa GTPase regulator##DQ980616|RPGR|6103|retinitis pigmentosa GTPase regulator##DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator	0.265756	CTCF.p2:12:0.266
chr1	207985326	207985474	reg1022133.p1	7.417	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	-59917	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	-60007	+	NM_175710 BC109190 BC109191	-166913	+	BX640941 TSC_hg19_v1_chr1_-_208059392	73923	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	98983	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	99157	-	BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule	0.894019	CTCF.p2:0:0.894
chr14	63641528	63641638	reg1018433.p1	7.417	+	AK074484 NM_172376	-73000	-	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	-129654	-	TSC_hg19_v1_chr14_+_62584125 BX248751	-1057425	+	NM_020663 AF087862 AK027351 AK027278 BC062575 AB209218 AF309563	29598	+	NM_145171	144009	-	AB451233 AB451358 EU447000 TSC_hg19_v1_chr14_-_64006406	364823	-	AK074484|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172376|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BX248751|FLJ43390|646113|uncharacterized LOC646113##NM_020663|RHOJ|57381|ras homolog gene family, member J##AF087862|RHOJ|57381|ras homolog gene family, member J##AK027351|RHOJ|57381|ras homolog gene family, member J##AK027278|RHOJ|57381|ras homolog gene family, member J##BC062575|RHOJ|57381|ras homolog gene family, member J##AB209218|RHOJ|57381|ras homolog gene family, member J##AF309563|RHOJ|57381|ras homolog gene family, member J##NM_145171|GPHB5|122876|glycoprotein hormone beta 5##AB451233|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AB451358|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##EU447000|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform	0.962998	CTCF.p2:-11:0.963
chr5	102811466	102811585	reg1017205.p2	7.417	+	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-217068	+	BC024591 NM_015216 AB463068	-346251	+	TSC_hg19_v1_chr5_+_102456089 AK294787	-355467	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	86956	-	AK308672 NM_001962 U26403	4195065	-	TSC_hg19_v1_chr5_-_107717106 AK126722	4905605	-	BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK294787|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.878521	CTCF.p2:9:0.879
chr3	28709277	28709417	reg1021540.p1	7.416	+	NM_001040432	-277361	+	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	-318786	-	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	-318965	-	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	613617	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	1938675	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	1939056	+	NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2##NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	0.996474	CTCF.p2:-10:0.996
chr6	89580564	89580680	reg1017899.p2	7.416	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-704856	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-725586	-	BC029488 NM_030960 AF203447	-823092	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	92569	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	92686	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	92725	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.387863	CTCF.p2:22:0.388
chr18	57298956	57299056	reg1019895.p2	7.415	+	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	-272520	-	EU831768 EU831846 AY286502 BC065562 BX640655 AB593158 BX648518 BC106887 BC106888 AK123184 NM_181654	-313220	-	BC051901 AF115392 NM_013435 AB593018	-358352	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	65585	-	NM_133459 TSC_hg19_v1_chr18_-_57364656	65644	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	268223	+	DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1##EU831768|CPLX4|339302|complexin 4##EU831846|CPLX4|339302|complexin 4##AY286502|CPLX4|339302|complexin 4##BC065562|CPLX4|339302|complexin 4##BX640655|CPLX4|339302|complexin 4##AB593158|CPLX4|339302|complexin 4##BX648518|CPLX4|339302|complexin 4##BC106887|CPLX4|339302|complexin 4##BC106888|CPLX4|339302|complexin 4##AK123184|CPLX4|339302|complexin 4##NM_181654|CPLX4|339302|complexin 4##BC051901|RAX|30062|retina and anterior neural fold homeobox##AF115392|RAX|30062|retina and anterior neural fold homeobox##NM_013435|RAX|30062|retina and anterior neural fold homeobox##AB593018|RAX|30062|retina and anterior neural fold homeobox##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1	0.98165	CTCF.p2:-4:0.982
chr22	22560754	22560891	reg1019425.p1	7.415	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	-10644	+	X02422 TSC_hg19_v1_chr22_+_22550141	-10693	+	TSC_hg19_v1_chr22_+_22385369 AF026922	-175457	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	8442	+	BC017922 NM_007128 CR456609 CU013205 CU013493 AB590106	38389	+	TSC_hg19_v1_chr22_+_22652513 BC033148 AK090629 AX746545 BX641141	91697	+	BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57##BC017922|VPREB1|7441|pre-B lymphocyte 1##NM_007128|VPREB1|7441|pre-B lymphocyte 1##CR456609|VPREB1|7441|pre-B lymphocyte 1##CU013205|VPREB1|7441|pre-B lymphocyte 1##CU013493|VPREB1|7441|pre-B lymphocyte 1##BC033148|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##AK090629|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##BX641141|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene	0.0	
chr4	140540913	140541018	reg1020879.p1	7.414	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-63532	-	AL136904 NM_031296	-166005	+	TSC_hg19_v1_chr4_-_140374867 AK097885	-166091	-	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	46025	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	46169	+	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	533373	-	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AL136904|RAB33B|83452|RAB33B, member RAS oncogene family##NM_031296|RAB33B|83452|RAB33B, member RAS oncogene family##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)	0.3448	CTCF.p2:9:0.345
chr11	102366010	102366170	reg1001455.p1	7.413	+	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-42477	-	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-148062	+	TSC_hg19_v1_chr11_+_102217944 AK303197	-148161	+	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	35369	-	AB527354 NM_004771 Y12779	129965	-	AB527320 AF195192 AY358752 NM_022122	210365	-	DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##AK303197|BIRC2|329|baculoviral IAP repeat containing 2##DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27	0.0	
chr17	65626163	65626307	reg1019153.p2	7.413	+	BC007905 NM_012417 NM_181671	-252312	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-252647	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-252826	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	87815	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	195467	+	AK293224 TSC_hg19_v1_chr17_+_65822221	195982	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.470921	CTCF.p2:-1:0.471
chr6	33819814	33819931	reg1018535.p1	7.413	+	BC112314 BC143981 Y00695 BC069675 NM_001040109 NM_001184698 NM_002418	-48098	-	BC039864 NM_181336 TSC_hg19_v1_chr6_-_33756906	-62962	-	TSC_hg19_v1_chr6_-_33756897 BC051803	-62981	-	AB385221 EU432124 HQ258665 HQ258669 U92457 BC130526 BC130528 BC144057 NM_000841 X80818 AK308669	281530	-	NM_002131 NM_145899 NM_145903 TSC_hg19_v1_chr6_+_34204617	384739	+	TSC_hg19_v1_chr6_+_34204649 AK096863 M23616 M23617 NM_145901 NM_145902 AK301434	384778	+	BC112314|MLN|4295|motilin##BC143981|MLN|4295|motilin##Y00695|MLN|4295|motilin##BC069675|MLN|4295|motilin##NM_001040109|MLN|4295|motilin##NM_001184698|MLN|4295|motilin##NM_002418|MLN|4295|motilin##BC039864|LEMD2|221496|LEM domain containing 2##NM_181336|LEMD2|221496|LEM domain containing 2##BC051803|LEMD2|221496|LEM domain containing 2##EU432124|GRM4|2914|glutamate receptor, metabotropic 4##HQ258665|GRM4|2914|glutamate receptor, metabotropic 4##HQ258669|GRM4|2914|glutamate receptor, metabotropic 4##U92457|GRM4|2914|glutamate receptor, metabotropic 4##BC130526|GRM4|2914|glutamate receptor, metabotropic 4##BC130528|GRM4|2914|glutamate receptor, metabotropic 4##BC144057|GRM4|2914|glutamate receptor, metabotropic 4##NM_000841|GRM4|2914|glutamate receptor, metabotropic 4##X80818|GRM4|2914|glutamate receptor, metabotropic 4##NM_002131|HMGA1|3159|high mobility group AT-hook 1##NM_145899|HMGA1|3159|high mobility group AT-hook 1##NM_145903|HMGA1|3159|high mobility group AT-hook 1##AK096863|HMGA1|3159|high mobility group AT-hook 1##M23616|HMGA1|3159|high mobility group AT-hook 1##M23617|HMGA1|3159|high mobility group AT-hook 1##NM_145901|HMGA1|3159|high mobility group AT-hook 1##NM_145902|HMGA1|3159|high mobility group AT-hook 1##AK301434|HMGA1|3159|high mobility group AT-hook 1	0.193621	
chr9	109920743	109920842	reg1018918.p1	7.413	+	TSC_hg19_v1_chr9_+_109686439 CR749850	-234323	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	-295428	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-1463874	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	124740	+	TSC_hg19_v1_chr9_+_110045559 AK125226 AK223479	124765	+	TSC_hg19_v1_chr9_+_110045567 D21090	124810	+	CR749850|ZNF462|58499|zinc finger protein 462##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK125226|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK223479|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##D21090|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.06504	
chr11	8230894	8230982	reg1018891.p2	7.412	+	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	-40375	-	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-128139	+	NM_003320 U82467	-170759	+	BC069752 BC069793 M26682 NM_002315	54414	-	AK093251 AX748014 BC031231 NM_030906	384519	-	AK293193 TSC_hg19_v1_chr11_-_8615705	384765	-	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##NM_003320|TUB|7275|tubby homolog (mouse)##U82467|TUB|7275|tubby homolog (mouse)##BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33##AK293193|STK33|65975|serine/threonine kinase 33	0.985373	CTCF.p2:6:0.844
chr7	88418905	88419061	reg1018151.p1	7.412	+	BC140826 BC140829 AK056672 AY295769 NM_181646	-30267	+	BC020600 AF423422 AF423423 AK026806 AK307644 TSC_hg19_v1_chr7_-_87936207 NM_001205315 NM_001205316 NM_024636	-482769	-	TSC_hg19_v1_chr7_-_87856292 AK296601 NM_198901	-562689	-	BC028365 NM_152706	6047	-	NM_012449 TSC_hg19_v1_chr7_+_89783782 AK308452 BC011802	1364754	+	AK304076 TSC_hg19_v1_chr7_+_89783791 AF186249	1364829	+	BC140826|ZNF804B|219578|zinc finger protein 804B##BC140829|ZNF804B|219578|zinc finger protein 804B##AK056672|ZNF804B|219578|zinc finger protein 804B##AY295769|ZNF804B|219578|zinc finger protein 804B##NM_181646|ZNF804B|219578|zinc finger protein 804B##BC020600|STEAP4|79689|STEAP family member 4##AF423422|STEAP4|79689|STEAP family member 4##AF423423|STEAP4|79689|STEAP family member 4##AK026806|STEAP4|79689|STEAP family member 4##AK307644|STEAP4|79689|STEAP family member 4##NM_001205315|STEAP4|79689|STEAP family member 4##NM_001205316|STEAP4|79689|STEAP family member 4##NM_024636|STEAP4|79689|STEAP family member 4##AK296601|SRI|6717|sorcin##NM_198901|SRI|6717|sorcin##BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62##NM_012449|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK308452|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC011802|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK304076|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF186249|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1	0.719468	CTCF.p2:-17:0.719
chrX	99926253	99926377	reg1018528.p1	7.412	+	BC020733 TSC_hg19_v1_chrX_+_99899388	-26920	+	NM_014467 TSC_hg19_v1_chrX_+_99899195 AK075462 AF060567 AF393649	-27083	+	BT006977 CR457115 AB527646 DQ890668 DQ893849 TSC_hg19_v1_chrX_-_99891804 AF053453 AK299176 AF133426 AK309581 AY358825 AB097016 AF043906 U84895 BC012389 NM_003270 AK075072 AB209876 AK315773 AK300852	-34547	-	AK313086 BC014913 TSC_hg19_v1_chrX_-_99986519 NM_001174068 NM_080737	60196	-	TSC_hg19_v1_chrX_-_99987103 BX537410 AK292588 AK094110 NM_001129896	60788	-	NM_001325 TSC_hg19_v1_chrX_+_100075379	149049	+	BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2##NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2##BT006977|TSPAN6|7105|tetraspanin 6##CR457115|TSPAN6|7105|tetraspanin 6##DQ890668|TSPAN6|7105|tetraspanin 6##DQ893849|TSPAN6|7105|tetraspanin 6##AF053453|TSPAN6|7105|tetraspanin 6##AK299176|TSPAN6|7105|tetraspanin 6##AF133426|TSPAN6|7105|tetraspanin 6##AK309581|TSPAN6|7105|tetraspanin 6##AY358825|TSPAN6|7105|tetraspanin 6##AB097016|TSPAN6|7105|tetraspanin 6##AF043906|TSPAN6|7105|tetraspanin 6##U84895|TSPAN6|7105|tetraspanin 6##BC012389|TSPAN6|7105|tetraspanin 6##NM_003270|TSPAN6|7105|tetraspanin 6##AK075072|TSPAN6|7105|tetraspanin 6##AB209876|TSPAN6|7105|tetraspanin 6##AK315773|TSPAN6|7105|tetraspanin 6##AK300852|TSPAN6|7105|tetraspanin 6##AK313086|SYTL4|94121|synaptotagmin-like 4##BC014913|SYTL4|94121|synaptotagmin-like 4##NM_001174068|SYTL4|94121|synaptotagmin-like 4##NM_080737|SYTL4|94121|synaptotagmin-like 4##BX537410|SYTL4|94121|synaptotagmin-like 4##AK292588|SYTL4|94121|synaptotagmin-like 4##NM_001129896|SYTL4|94121|synaptotagmin-like 4##NM_001325|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa	0.991837	CTCF.p2:22:0.992
chr13	31155794	31155940	reg1018581.p1	7.411	+	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	-115809	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	-115874	-	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-274298	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	35760	-	NM_005800 BC038103 TSC_hg19_v1_chr13_+_31192056 BC036027 AK289826 CR627370 X59131 BC012594 AL832776	36096	+	AK314143 NM_001204406	131747	+	AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1##NM_005800|USPL1|10208|ubiquitin specific peptidase like 1##BC038103|USPL1|10208|ubiquitin specific peptidase like 1##BC036027|USPL1|10208|ubiquitin specific peptidase like 1##AK289826|USPL1|10208|ubiquitin specific peptidase like 1##CR627370|USPL1|10208|ubiquitin specific peptidase like 1##X59131|USPL1|10208|ubiquitin specific peptidase like 1##BC012594|USPL1|10208|ubiquitin specific peptidase like 1##AL832776|USPL1|10208|ubiquitin specific peptidase like 1##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein	0.872268	CTCF.p2:-85:0.748
chr4	9697694	9697827	reg1020022.p1	7.411	+	AF529414 NM_001040448	-251501	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-332907	+	AF544012 BC100991 NM_001105662	-337652	+	NM_000798	85497	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	325364	-	AK310895 BC018897 NM_001001290 AK096819	344162	-	AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF544012|USP17|391627|ubiquitin specific peptidase 17##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_000798|DRD5|1816|dopamine receptor D5##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.666021	CTCF.p2:9:0.666
chr5	104136290	104136421	reg1018670.p2	7.411	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-1237874	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-1541898	+	BC024591 NM_015216 AB463068	-1671081	+	AK308672 NM_001962 U26403	2870235	-	TSC_hg19_v1_chr5_-_107717106 AK126722	3580775	-	BC063316 NM_001163315	3581443	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.992147	CTCF.p2:-6:0.992
chr6	70818251	70818359	reg1013300.p1	7.411	+	AK309023 TSC_hg19_v1_chr6_+_70577418	-240943	+	D38163 NM_001858 AK310621 BC070177 BC113362 BC113364	-241842	+	TSC_hg19_v1_chr6_-_70506885 BC047073 NM_018368	-311360	-	X54413 BC008620 BC063646 NM_078485	174527	-	X54412 BC015409 TSC_hg19_v1_chr6_-_71012827 NM_001851	194495	-	TSC_hg19_v1_chr6_+_71123122 NM_001105531 NM_020819	304808	+	D38163|COL19A1|1310|collagen, type XIX, alpha 1##NM_001858|COL19A1|1310|collagen, type XIX, alpha 1##AK310621|COL19A1|1310|collagen, type XIX, alpha 1##BC070177|COL19A1|1310|collagen, type XIX, alpha 1##BC113362|COL19A1|1310|collagen, type XIX, alpha 1##BC113364|COL19A1|1310|collagen, type XIX, alpha 1##BC047073|LMBRD1|55788|LMBR1 domain containing 1##NM_018368|LMBRD1|55788|LMBR1 domain containing 1##X54413|COL9A1|1297|collagen, type IX, alpha 1##BC008620|COL9A1|1297|collagen, type IX, alpha 1##BC063646|COL9A1|1297|collagen, type IX, alpha 1##NM_078485|COL9A1|1297|collagen, type IX, alpha 1##X54412|COL9A1|1297|collagen, type IX, alpha 1##BC015409|COL9A1|1297|collagen, type IX, alpha 1##NM_001851|COL9A1|1297|collagen, type IX, alpha 1##NM_001105531|FAM135A|57579|family with sequence similarity 135, member A##NM_020819|FAM135A|57579|family with sequence similarity 135, member A	0.295569	CTCF.p2:33:0.296
chr14	52462981	52463116	reg1021415.p1	7.410	+	TSC_hg19_v1_chr14_+_52456323 EU446806 AB463506 AY817175	-6709	+	AF087877 AF100755 AF151857 DQ525179 NM_016039 TSC_hg19_v1_chr14_+_52456231 AK312004 BC001722	-6794	+	TSC_hg19_v1_chr14_+_52327416 BC020774	-135612	+	AJ223500 D86425 AB385187 CU690132 TSC_hg19_v1_chr14_-_52535721	72674	-	TSC_hg19_v1_chr14_-_52535737 AK300462	72702	-	BC035608 TSC_hg19_v1_chr14_-_52535777 AK291652	72726	-	EU446806|C14orf166|51637|chromosome 14 open reading frame 166##AY817175|C14orf166|51637|chromosome 14 open reading frame 166##AF087877|C14orf166|51637|chromosome 14 open reading frame 166##AF100755|C14orf166|51637|chromosome 14 open reading frame 166##AF151857|C14orf166|51637|chromosome 14 open reading frame 166##DQ525179|C14orf166|51637|chromosome 14 open reading frame 166##NM_016039|C14orf166|51637|chromosome 14 open reading frame 166##AK312004|C14orf166|51637|chromosome 14 open reading frame 166##BC001722|C14orf166|51637|chromosome 14 open reading frame 166##BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AJ223500|NID2|22795|nidogen 2 (osteonidogen)##D86425|NID2|22795|nidogen 2 (osteonidogen)##AK300462|NID2|22795|nidogen 2 (osteonidogen)##BC035608|NID2|22795|nidogen 2 (osteonidogen)##AK291652|NID2|22795|nidogen 2 (osteonidogen)	0.022141	
chr9	2087830	2087945	reg1018716.p2	7.409	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-72591	+	AF130729 NM_181872	-1037278	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-1037517	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	533920	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	534187	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	534225	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.979516	CTCF.p2:5:0.980
chr10	101470996	101471123	reg1020088.p1	7.408	+	TSC_hg19_v1_chr10_+_101419285 AK314542 AK055540 AK309735 NM_020354 BC119008 BC122857 AF269255	-51825	+	TSC_hg19_v1_chr10_-_101380229 NM_031212	-90836	-	BC076399 TSC_hg19_v1_chr10_-_101380197 BC047312	-90879	-	BT007129 DQ890710 DQ893892 BC002382 BC013403 TSC_hg19_v1_chr10_-_101491845 BC078161 AK291654 AK298864	20770	-	AF026850 AF044323 TSC_hg19_v1_chr10_-_101491885	20817	-	TSC_hg19_v1_chr10_+_101491984 NM_015960	20908	+	AK314542|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##AK055540|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##AK309735|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##NM_020354|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##BC119008|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##BC122857|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##AF269255|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##NM_031212|SLC25A28|81894|solute carrier family 25, member 28##BC076399|SLC25A28|81894|solute carrier family 25, member 28##BC047312|SLC25A28|81894|solute carrier family 25, member 28##BT007129|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##DQ890710|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##DQ893892|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##BC002382|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##BC013403|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##BC078161|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AK291654|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AK298864|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AF026850|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AF044323|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##NM_015960|CUTC|51076|cutC copper transporter homolog (E. coli)	0.984845	CTCF.p2:21:0.985
chr11	72853450	72853563	reg1017818.p2	7.408	+	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	-457	-	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-328024	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-328101	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	75838	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	75940	+	AK313942 TSC_hg19_v1_chr11_+_72929608	76110	+	AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.0	
chr20	5093755	5093896	reg1017465.p1	7.408	+	TSC_hg19_v1_chr20_-_5093685 AY359115 BC015113 AK055700 BC110408 BC011990 BC009768 BC009770 AF161392 BC009769 AK315606 BC066317 AK309823 BC070212 NM_001009923 NM_001009924 NM_001009925 NM_014145	-210	-	BC013112 AF164142 NM_203327	-102900	-	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	-111665	-	CR536501 CR541799 AB464071 DQ891403 DQ894581 M15796 TSC_hg19_v1_chr20_-_5100605 BC000491 BC062439 D28458 AK313286 M29310 NM_182649	6730	-	AK300558 AK311014 NM_002592	13401	-	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	13697	+	AY359115|C20orf30|29058|chromosome 20 open reading frame 30##BC015113|C20orf30|29058|chromosome 20 open reading frame 30##AK055700|C20orf30|29058|chromosome 20 open reading frame 30##BC110408|C20orf30|29058|chromosome 20 open reading frame 30##BC011990|C20orf30|29058|chromosome 20 open reading frame 30##BC009768|C20orf30|29058|chromosome 20 open reading frame 30##BC009770|C20orf30|29058|chromosome 20 open reading frame 30##AF161392|C20orf30|29058|chromosome 20 open reading frame 30##BC009769|C20orf30|29058|chromosome 20 open reading frame 30##AK315606|C20orf30|29058|chromosome 20 open reading frame 30##BC066317|C20orf30|29058|chromosome 20 open reading frame 30##AK309823|C20orf30|29058|chromosome 20 open reading frame 30##BC070212|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009923|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009924|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009925|C20orf30|29058|chromosome 20 open reading frame 30##NM_014145|C20orf30|29058|chromosome 20 open reading frame 30##BC013112|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AF164142|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_203327|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##CR536501|PCNA|5111|proliferating cell nuclear antigen##CR541799|PCNA|5111|proliferating cell nuclear antigen##DQ891403|PCNA|5111|proliferating cell nuclear antigen##DQ894581|PCNA|5111|proliferating cell nuclear antigen##M15796|PCNA|5111|proliferating cell nuclear antigen##BC000491|PCNA|5111|proliferating cell nuclear antigen##BC062439|PCNA|5111|proliferating cell nuclear antigen##D28458|PCNA|5111|proliferating cell nuclear antigen##AK313286|PCNA|5111|proliferating cell nuclear antigen##NM_182649|PCNA|5111|proliferating cell nuclear antigen##AK300558|PCNA|5111|proliferating cell nuclear antigen##NM_002592|PCNA|5111|proliferating cell nuclear antigen##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	0.764006	CTCF.p2:5:0.734
chr21	26656171	26656289	reg1020407.p1	7.408	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-855162	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-4285457	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-4285540	+	TSC_hg19_v1_chr21_+_26934442 AF402776	278242	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	323585	-	NM_021219 TSC_hg19_v1_chr21_+_27011719	355423	+	AK124194|FLJ42200|400860|FLJ42200 protein##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##NM_021219|JAM2|58494|junctional adhesion molecule 2	0.281019	CTCF.p2:1:0.281
chr11	19959927	19960049	reg1019515.p1	7.406	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	-225122	+	AB063115 NM_001111018 AJ488205	-587673	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-696787	-	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	84400	+	TSC_hg19_v1_chr11_+_20049136 AK307574	89144	+	AK290458 TSC_hg19_v1_chr11_+_20070637	110635	+	AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##AK290458|NAV2|89797|neuron navigator 2	0.976511	CTCF.p2:0:0.977
chr13	25129335	25129426	reg1016362.p1	7.406	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	-42469	-	BC040438 NM_178540 AY358145	-245663	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	-284482	+	AK292968 NM_001185085 NM_001676	125168	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	208939	+	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	367589	-	BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13##AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J	0.830068	CTCF.p2:14:0.830
chr14	57022824	57022923	reg1016694.p1	7.406	+	TSC_hg19_v1_chr14_+_56585163 AF302502	-437699	+	TSC_hg19_v1_chr14_+_56585131 BC009476 NM_021255 AK315727	-437879	+	L25616 TSC_hg19_v1_chr14_+_56078737 AB527439	-944124	+	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	23672	+	NM_172337 AB593056	249490	-	AK314271 BC032579 NM_021728 AB593058	254271	-	AF302502|PELI2|57161|pellino homolog 2 (Drosophila)##BC009476|PELI2|57161|pellino homolog 2 (Drosophila)##NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)##AK315727|PELI2|57161|pellino homolog 2 (Drosophila)##L25616|KTN1|3895|kinectin 1 (kinesin receptor)##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101##NM_172337|OTX2|5015|orthodenticle homeobox 2##AB593056|OTX2|5015|orthodenticle homeobox 2##AK314271|OTX2|5015|orthodenticle homeobox 2##BC032579|OTX2|5015|orthodenticle homeobox 2##NM_021728|OTX2|5015|orthodenticle homeobox 2##AB593058|OTX2|5015|orthodenticle homeobox 2	0.0	
chr6	33115977	33116088	reg1018839.p1	7.406	+	NM_001242524 NM_001242525	-67478	-	NM_002121 AK291986 AK303153 TSC_hg19_v1_chr6_+_33043767 AK301322 J03041 X01426 M83664 AK313305 BC013184 AY831401 AY831402 AY831403 AY804132 AY804142 X03067 AY804140 AY804134 AY804135 AY804137 AY804138 AY804139 AY804143 BC007963 BC015000 AB208978 AY804141 M28200 DQ284441 AY804133 AY804136 AB529034 DQ891050 DQ894229 CU680546 AY656678 AY656679 AY656680 AY831404 BT019780 GQ891549 M28202 M21886	-72229	+	X00457 AB590198 CU679537 DQ893463 DQ896324 AB209058 AK292709 TSC_hg19_v1_chr6_-_33041427 BC009956 M27487 NM_033554	-74664	-	TSC_hg19_v1_chr6_-_33160241 BC053886 NM_001163771 NM_080679 NM_080680 NM_080681	44233	-	TSC_hg19_v1_chr6_-_33168171 BT007280 HQ692844 HQ709179 AB384890	52176	-	M84820 AB209244 X63522 TSC_hg19_v1_chr6_-_33168436 AK225842 BC001167 NM_021976 AK295759	52371	-	NM_001242524|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_001242525|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_002121|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK291986|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK303153|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK301322|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##J03041|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X01426|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M83664|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK313305|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC013184|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831401|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831402|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831403|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804132|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804142|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X03067|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804140|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804134|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804135|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804137|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804138|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804139|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804143|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC007963|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC015000|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AB208978|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804141|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M28200|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ284441|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804133|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804136|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ891050|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ894229|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656678|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656679|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656680|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831404|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BT019780|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##GQ891549|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M28202|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M21886|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X00457|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ893463|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ896324|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AB209058|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AK292709|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##BC009956|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##M27487|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_033554|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##BC053886|COL11A2|1302|collagen, type XI, alpha 2##NM_001163771|COL11A2|1302|collagen, type XI, alpha 2##NM_080679|COL11A2|1302|collagen, type XI, alpha 2##NM_080680|COL11A2|1302|collagen, type XI, alpha 2##NM_080681|COL11A2|1302|collagen, type XI, alpha 2##BT007280|RXRB|6257|retinoid X receptor, beta##M84820|RXRB|6257|retinoid X receptor, beta##AB209244|RXRB|6257|retinoid X receptor, beta##X63522|RXRB|6257|retinoid X receptor, beta##AK225842|RXRB|6257|retinoid X receptor, beta##BC001167|RXRB|6257|retinoid X receptor, beta##NM_021976|RXRB|6257|retinoid X receptor, beta##AK295759|RXRB|6257|retinoid X receptor, beta	0.915682	CTCF.p2:2:0.916
chr8	56492439	56492555	reg1019815.p1	7.406	+	BC106028 AY534241 NM_052898	-477483	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	-963845	+	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	-1121981	+	AF286340 NM_024831	193248	+	AK308247 AK056932 NM_152417 BC020835 BC071636	193400	-	TSC_hg19_v1_chr8_+_56686028 AY028423 AK314693 BX648548 AF432215	193523	+	AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##AF286340|TGS1|96764|trimethylguanosine synthase 1##NM_024831|TGS1|96764|trimethylguanosine synthase 1##AK308247|TMEM68|137695|transmembrane protein 68##AK056932|TMEM68|137695|transmembrane protein 68##NM_152417|TMEM68|137695|transmembrane protein 68##BC020835|TMEM68|137695|transmembrane protein 68##BC071636|TMEM68|137695|transmembrane protein 68##AY028423|TGS1|96764|trimethylguanosine synthase 1##AK314693|TGS1|96764|trimethylguanosine synthase 1##BX648548|TGS1|96764|trimethylguanosine synthase 1##AF432215|TGS1|96764|trimethylguanosine synthase 1	0.06485	
chr12	64667656	64667772	reg1018501.p2	7.405	+	BC071634 AK057111 BC036246 AK129933 NM_152440	-51661	-	TSC_hg19_v1_chr12_+_64238511 BC053903 NM_020762 BC029919	-429168	+	TSC_hg19_v1_chr12_+_64237847 BC065032	-429988	+	BC039369 NM_001099676 NM_001170633	116603	-	TSC_hg19_v1_chr12_+_64798240 NM_007235 AK308108 AK292884	130532	+	BC020569 Y16414 TSC_hg19_v1_chr12_+_64803772 AF039022	136064	+	BC071634|C12orf66|144577|chromosome 12 open reading frame 66##AK057111|C12orf66|144577|chromosome 12 open reading frame 66##BC036246|C12orf66|144577|chromosome 12 open reading frame 66##AK129933|C12orf66|144577|chromosome 12 open reading frame 66##NM_152440|C12orf66|144577|chromosome 12 open reading frame 66##BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC039369|C12orf56|115749|chromosome 12 open reading frame 56##NM_001099676|C12orf56|115749|chromosome 12 open reading frame 56##NM_001170633|C12orf56|115749|chromosome 12 open reading frame 56##NM_007235|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK308108|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK292884|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	0.531754	CTCF.p2:-13:0.532
chr22	36462239	36462419	reg1014759.p2	7.405	+	AY072786 DQ778625 TSC_hg19_v1_chr22_-_36424553 AK055213 NM_001082578 NM_001082579	-37790	-	TSC_hg19_v1_chr22_-_36236476 AF229058 AL009266 AK314632 BC013115 BC025281 AK291460 NM_001031695 NM_001082576 NM_001082577 NM_014309	-225804	-	CR456559 TSC_hg19_v1_chr22_-_36236341	-225989	-	BC042918 BC038352 AK025349 AF070675 BC070144 AF305227 BC050596 AY014902 AY014903 AY014904 AY014905 NM_145640	94549	-	AY014906 AY014907 NM_145641 NM_145642	99895	-	AK290466 BC006276 AK313637 AK311506 AY014914 AY014915 NM_030643 NM_145660	138489	-	AY072786|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ778625|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK055213|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082578|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082579|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC042918|APOL3|80833|apolipoprotein L, 3##BC038352|APOL3|80833|apolipoprotein L, 3##AK025349|APOL3|80833|apolipoprotein L, 3##AF070675|APOL3|80833|apolipoprotein L, 3##AF305227|APOL3|80833|apolipoprotein L, 3##BC050596|APOL3|80833|apolipoprotein L, 3##AY014902|APOL3|80833|apolipoprotein L, 3##AY014903|APOL3|80833|apolipoprotein L, 3##AY014904|APOL3|80833|apolipoprotein L, 3##AY014905|APOL3|80833|apolipoprotein L, 3##NM_145640|APOL3|80833|apolipoprotein L, 3##AY014906|APOL3|80833|apolipoprotein L, 3##AY014907|APOL3|80833|apolipoprotein L, 3##NM_145641|APOL3|80833|apolipoprotein L, 3##NM_145642|APOL3|80833|apolipoprotein L, 3##AK290466|APOL4|80832|apolipoprotein L, 4##BC006276|APOL4|80832|apolipoprotein L, 4##AK313637|APOL4|80832|apolipoprotein L, 4##AK311506|APOL4|80832|apolipoprotein L, 4##AY014914|APOL4|80832|apolipoprotein L, 4##AY014915|APOL4|80832|apolipoprotein L, 4##NM_030643|APOL4|80832|apolipoprotein L, 4##NM_145660|APOL4|80832|apolipoprotein L, 4	0.934992	CTCF.p2:26:0.935
chr8	6949395	6949505	reg1018045.p1	7.405	+	BC107079 BC069690 NM_021010	-35196	-	BC093791 BC112188 BC069423 M21130 M23281 BC119706 X52053 BC027917 M26602 NM_005217 X13621 NM_001042500 NM_004084	-73651	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	-92750	-	NM_001164452 NM_001164456	164975	+	NM_001164452 NM_001164456	187841	+	NM_001164455	195463	+	BC107079|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC069690|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##NM_021010|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M23281|DEFA3|1668|defensin, alpha 3, neutrophil-specific##BC119706|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X52053|DEFA1|1667|defensin, alpha 1##BC027917|DEFA3|1668|defensin, alpha 3, neutrophil-specific##M26602|DEFA1|1667|defensin, alpha 1##NM_005217|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X13621|DEFA3|1668|defensin, alpha 3, neutrophil-specific##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164455|FAM90A5|441315|family with sequence similarity 90, member A5	0.999649	CTCF.p2:4:1.000
chr11	58869795	58869954	reg1018604.p1	7.404	+	AK091965 AX747281 DQ084381 NM_001220496 NM_080661 AK055818	-159122	+	NM_001220494 AK300479 BC008353	-174737	+	BC021682 NM_145016 BC016789	-257886	-	TSC_hg19_v1_chr11_+_58874641 BC062456 NM_001142703 NM_001142704 NM_198947 BC005998 AK304258 AY457926 AK303520	4788	+	TSC_hg19_v1_chr11_-_58910222 AK124475 BC028022	40369	-	TSC_hg19_v1_chr11_+_58910331 AK092237 AX747422 NM_001142519 NM_001142520 NM_001142521	40436	+	AK091965|GLYATL1|92292|glycine-N-acyltransferase-like 1##DQ084381|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220496|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_080661|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK055818|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC062456|FAM111B|374393|family with sequence similarity 111, member B##NM_001142703|FAM111B|374393|family with sequence similarity 111, member B##NM_001142704|FAM111B|374393|family with sequence similarity 111, member B##NM_198947|FAM111B|374393|family with sequence similarity 111, member B##BC005998|FAM111B|374393|family with sequence similarity 111, member B##AK304258|FAM111B|374393|family with sequence similarity 111, member B##AY457926|FAM111B|374393|family with sequence similarity 111, member B##AK303520|FAM111B|374393|family with sequence similarity 111, member B##AK092237|FAM111A|63901|family with sequence similarity 111, member A##NM_001142519|FAM111A|63901|family with sequence similarity 111, member A##NM_001142520|FAM111A|63901|family with sequence similarity 111, member A##NM_001142521|FAM111A|63901|family with sequence similarity 111, member A	0.0	
chr16	90182674	90182740	reg1017320.p2	7.404	+	TSC_hg19_v1_chr16_+_90168671 AK092558 AX747598	-14031	+	AM690992 AM690991 AM690993 NM_001098173	-40373	-	AB527979 BC107033 AF274347 AF274348 NM_052996	-54046	-	None	None	None	None	None	None	None	None	None	AK092558|FAM157C|100132055|family with sequence similarity 157, member C##AM690992|PRDM7|11105|PR domain containing 7##AM690991|PRDM7|11105|PR domain containing 7##AM690993|PRDM7|11105|PR domain containing 7##NM_001098173|PRDM7|11105|PR domain containing 7##BC107033|PRDM7|11105|PR domain containing 7##AF274347|PRDM7|11105|PR domain containing 7##AF274348|PRDM7|11105|PR domain containing 7##NM_052996|PRDM7|11105|PR domain containing 7	0.945213	CTCF.p2:9:0.945
chr4	20315408	20315514	reg1018608.p1	7.404	+	AB017168 NM_004787 BC117190 BC143978 AF133270	-60125	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-2291995	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-2502850	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	386606	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	670168	-	AY118170 DQ148489 NM_147183 AK290998	990108	-	AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4##AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4	0.89768	CTCF.p2:-16:0.898
chr4	54774935	54775041	reg1019290.p1	7.403	+	AK056823 NM_001126328 TSC_hg19_v1_chr4_-_54457761	-317244	-	BC022983 TSC_hg19_v1_chr4_-_54457654	-317345	-	TSC_hg19_v1_chr4_-_54424402 NM_032622	-350570	-	AB463552 DQ890711 DQ893893 TSC_hg19_v1_chr4_-_54930576	155538	-	TSC_hg19_v1_chr4_-_54930764 AF159423 BC034691	155747	-	TSC_hg19_v1_chr4_-_54930773 AK312427 NM_012110	155809	-	AK056823|LNX1|84708|ligand of numb-protein X 1##NM_001126328|LNX1|84708|ligand of numb-protein X 1##BC022983|LNX1|84708|ligand of numb-protein X 1##NM_032622|LNX1|84708|ligand of numb-protein X 1##DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2##DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2##AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2##BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2##AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	0.717274	CTCF.p2:-3:0.717
chr8	128748428	128748563	reg1016816.p1	7.402	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-5	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-170	+	DQ486513 NM_001159542	-320639	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	58288	+	AB042405 NM_031415	2050638	-	BC003599 TSC_hg19_v1_chr8_-_130951934	2203420	-	AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr9	33415509	33415651	reg1018667.p1	7.401	+	AK297860 TSC_hg19_v1_chr9_-_33402631 AK301949	-12968	-	BC062701 BC119672 BC119673 AB006190 NM_001170 TSC_hg19_v1_chr9_-_33402526	-13065	-	AK294028 TSC_hg19_v1_chr9_-_33402480 AK297885	-13102	-	BT007199 CR541991 CR542025 TSC_hg19_v1_chr9_-_33447592 AJ493597 BC013566 AB001325 AK292208 AK303206 AK315760 AK095363 NM_004925	32006	-	AK026193 TSC_hg19_v1_chr9_-_33465258	49644	-	TSC_hg19_v1_chr9_-_33473861 BC030139	58273	-	AK297860|AQP7|364|aquaporin 7##AK301949|AQP7|364|aquaporin 7##BC062701|AQP7|364|aquaporin 7##BC119672|AQP7|364|aquaporin 7##BC119673|AQP7|364|aquaporin 7##AB006190|AQP7|364|aquaporin 7##NM_001170|AQP7|364|aquaporin 7##AK294028|AQP7|364|aquaporin 7##AK297885|AQP7|364|aquaporin 7##BT007199|AQP3|360|aquaporin 3 (Gill blood group)##CR541991|AQP3|360|aquaporin 3 (Gill blood group)##CR542025|AQP3|360|aquaporin 3 (Gill blood group)##AJ493597|AQP3|360|aquaporin 3 (Gill blood group)##BC013566|AQP3|360|aquaporin 3 (Gill blood group)##AB001325|AQP3|360|aquaporin 3 (Gill blood group)##AK292208|AQP3|360|aquaporin 3 (Gill blood group)##AK303206|AQP3|360|aquaporin 3 (Gill blood group)##AK315760|AQP3|360|aquaporin 3 (Gill blood group)##AK095363|AQP3|360|aquaporin 3 (Gill blood group)##NM_004925|AQP3|360|aquaporin 3 (Gill blood group)##AK026193|NOL6|65083|nucleolar protein family 6 (RNA-associated)##BC030139|NOL6|65083|nucleolar protein family 6 (RNA-associated)	0.998015	CTCF.p2:11:0.998
chrX	130767666	130767774	reg1018028.p2	7.401	+	BC137050 AB529233 NM_001004486	-89722	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-344308	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-344458	-	TSC_hg19_v1_chrX_-_130964633 AK097911	196931	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	389601	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	389920	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.993511	CTCF.p2:-1:0.994
chr4	106395218	106395345	reg1021365.p1	7.400	+	AM393754 AM393796 TSC_hg19_v1_chr4_-_106395220 AK294097 AL136655 AF161473 BC039462 BC008246 BC035569 BC012903 BC022803 AK289607 CU691190 AM393483 EU831414 EU831507 BC001065 BC021071 AB528841 AK297096 AK299125 AK299501 BC057219 AK000466 AB026722 AF217187 NM_006903 NM_176866 NM_176867 NM_176869	-91	-	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	-327237	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	-327470	+	AK000191 NM_001242729 NM_017700 BC105695	78501	+	TSC_hg19_v1_chr4_-_106629819 BC014442 AK314939 NM_001142471 NM_020395	234560	-	TSC_hg19_v1_chr4_+_106629965 AK303547 BX648355 NM_024751 AK023335 AK225563	234692	+	AM393754|PPA2|27068|pyrophosphatase (inorganic) 2##AM393796|PPA2|27068|pyrophosphatase (inorganic) 2##AK294097|PPA2|27068|pyrophosphatase (inorganic) 2##AL136655|PPA2|27068|pyrophosphatase (inorganic) 2##AF161473|PPA2|27068|pyrophosphatase (inorganic) 2##BC039462|PPA2|27068|pyrophosphatase (inorganic) 2##BC008246|PPA2|27068|pyrophosphatase (inorganic) 2##BC035569|PPA2|27068|pyrophosphatase (inorganic) 2##BC012903|PPA2|27068|pyrophosphatase (inorganic) 2##BC022803|PPA2|27068|pyrophosphatase (inorganic) 2##AK289607|PPA2|27068|pyrophosphatase (inorganic) 2##AM393483|PPA2|27068|pyrophosphatase (inorganic) 2##EU831414|PPA2|27068|pyrophosphatase (inorganic) 2##EU831507|PPA2|27068|pyrophosphatase (inorganic) 2##AK299125|PPA2|27068|pyrophosphatase (inorganic) 2##BC057219|PPA2|27068|pyrophosphatase (inorganic) 2##AK000466|PPA2|27068|pyrophosphatase (inorganic) 2##AB026722|PPA2|27068|pyrophosphatase (inorganic) 2##AF217187|PPA2|27068|pyrophosphatase (inorganic) 2##NM_006903|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176866|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176867|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176869|PPA2|27068|pyrophosphatase (inorganic) 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_001242729|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC014442|INTS12|57117|integrator complex subunit 12##AK314939|INTS12|57117|integrator complex subunit 12##NM_001142471|INTS12|57117|integrator complex subunit 12##NM_020395|INTS12|57117|integrator complex subunit 12##AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	0.906914	CTCF.p2:-1:0.907
chr6	31164880	31164985	reg1017112.p1	7.400	+	AM851126 AM851121 AM851123 AM851125 AY730056 FM177952 FM177953 FM177954 FM177955 FM177956 FM177959 FM177960 FM177961 FM177962 FM177963 FM177965 FM177968 GU480808 GU480809 GU480810 GU480811 GU480812 GU480813 GU480815 GU480816 GU480817 GU480818 GU480819 GU480820 GU480821 GU480822 GU480823 GU480824 GU480825 GU480826 GU480827 GU480828 GU480829 GU480830 GU480844 GU480856 GU480886 GU480888 GU480891 GU480897 GU480915 HQ122658 HQ122659 HQ122660 HQ122661 HQ122662 HQ122663 HQ122664 HQ122665 HQ122666 HQ122667 HQ122668 HQ122669 HQ122670 HQ122671 HQ122672 HQ122673 HQ122674 HQ122675 HQ122860 HQ122904 AB528279 HQ258221 HQ258573 BC069246 Z11898 AM851115 AM851118 AM851116 AM851117 AM851119 AM851120 BC117435 BC117437 NM_002701	-26617	-	DQ486515 DQ486516 NM_001173531 NM_203289	-30318	-	TSC_hg19_v1_chr6_+_31126735 S53374	-38131	+	M28207 M24096 M21963 U07230 Z47377 U74387 AJ005199 AJ440716 AJ537578 D49820 D83741 FN662479 M11886 M24031 U06835 M28206 M26712 L20091 CU675811 BC007814 BC010542 AB590141 AF168611 AF196489 AF405691 AJ010748 AJ010749 AM237285 AY732487 D12471 D31817 D38526 D49552 D49819 D50852 D50853 D50854 D64145 D64146 D64147 D64148 D64149 D64150 D64151 D64152 D83029 D83030 D83031 DQ891896 DQ895082 L38251 M26429 M26430 M84171 M84173 M84174 M84386 M99388 M99389 M99390 U06487 U06695 U06696 U09853 U41386 U41420 U57028 U62824 X73518 X76189 X78343 X82122 X83401 X87841 X96582 X97321 X98742 Y09156 Y10520 Y11843 Z15144 Z33459 Z46809 Z46810 Z83247 M28160 X58536 BC002463 X67818 X70856 X70857 TSC_hg19_v1_chr6_-_31239870 BC004489 BC033293 BC008457 M24097 AK130592 AK301283 AK304527 X83394 AK024836 BC041078	74754	-	TSC_hg19_v1_chr6_-_31239888 NM_001243042 NM_002117	74968	-	TSC_hg19_v1_chr6_-_31324569 U18661 M27540 AY221104 U74386 U28759 AF081275 AJ002675 AJ002676 AJ002677 AJ003063 AJ223602 AY040668 AY569160 FN662479 HM989017 HM989018 L42545 L47338 L47986 L48400 L49343 L63544 L76252 L76931 L76933 L76934 L76935 L77114 L79935 L79936 L79937 U06697 U16298 U18789 U32678 U34619 U34810 U43337 Y07710 AJ276427 M62852 M83191 M83193 M83194 M83195 U58110	159717	-	AM851126|POU5F1|5460|POU class 5 homeobox 1##AM851121|POU5F1|5460|POU class 5 homeobox 1##AM851123|POU5F1|5460|POU class 5 homeobox 1##AM851125|POU5F1|5460|POU class 5 homeobox 1##FM177952|POU5F1|5460|POU class 5 homeobox 1##FM177953|POU5F1|5460|POU class 5 homeobox 1##FM177954|POU5F1|5460|POU class 5 homeobox 1##FM177955|POU5F1|5460|POU class 5 homeobox 1##FM177956|POU5F1|5460|POU class 5 homeobox 1##FM177959|POU5F1|5460|POU class 5 homeobox 1##FM177960|POU5F1|5460|POU class 5 homeobox 1##FM177961|POU5F1|5460|POU class 5 homeobox 1##FM177962|POU5F1|5460|POU class 5 homeobox 1##FM177963|POU5F1|5460|POU class 5 homeobox 1##FM177965|POU5F1|5460|POU class 5 homeobox 1##FM177968|POU5F1|5460|POU class 5 homeobox 1##GU480808|POU5F1|5460|POU class 5 homeobox 1##GU480809|POU5F1|5460|POU class 5 homeobox 1##GU480810|POU5F1|5460|POU class 5 homeobox 1##GU480811|POU5F1|5460|POU class 5 homeobox 1##GU480812|POU5F1|5460|POU class 5 homeobox 1##GU480813|POU5F1|5460|POU class 5 homeobox 1##GU480815|POU5F1|5460|POU class 5 homeobox 1##GU480816|POU5F1|5460|POU class 5 homeobox 1##GU480817|POU5F1|5460|POU class 5 homeobox 1##GU480818|POU5F1|5460|POU class 5 homeobox 1##GU480819|POU5F1|5460|POU class 5 homeobox 1##GU480820|POU5F1|5460|POU class 5 homeobox 1##GU480821|POU5F1|5460|POU class 5 homeobox 1##GU480822|POU5F1|5460|POU class 5 homeobox 1##GU480823|POU5F1|5460|POU class 5 homeobox 1##GU480824|POU5F1|5460|POU class 5 homeobox 1##GU480825|POU5F1|5460|POU class 5 homeobox 1##GU480826|POU5F1|5460|POU class 5 homeobox 1##GU480827|POU5F1|5460|POU class 5 homeobox 1##GU480828|POU5F1|5460|POU class 5 homeobox 1##GU480829|POU5F1|5460|POU class 5 homeobox 1##GU480830|POU5F1|5460|POU class 5 homeobox 1##GU480886|POU5F1B|5462|POU class 5 homeobox 1B##GU480888|POU5F1P3|642559|POU class 5 homeobox 1 pseudogene 3##GU480891|POU5F1P3|642559|POU class 5 homeobox 1 pseudogene 3##GU480897|POU5F1P3|642559|POU class 5 homeobox 1 pseudogene 3##GU480915|POU5F1P3|642559|POU class 5 homeobox 1 pseudogene 3##HQ122658|POU5F1|5460|POU class 5 homeobox 1##HQ122659|POU5F1|5460|POU class 5 homeobox 1##HQ122660|POU5F1|5460|POU class 5 homeobox 1##HQ122661|POU5F1|5460|POU class 5 homeobox 1##HQ122662|POU5F1|5460|POU class 5 homeobox 1##HQ122663|POU5F1|5460|POU class 5 homeobox 1##HQ122664|POU5F1|5460|POU class 5 homeobox 1##HQ122665|POU5F1|5460|POU class 5 homeobox 1##HQ122666|POU5F1|5460|POU class 5 homeobox 1##HQ122667|POU5F1|5460|POU class 5 homeobox 1##HQ122668|POU5F1|5460|POU class 5 homeobox 1##HQ122669|POU5F1|5460|POU class 5 homeobox 1##HQ122670|POU5F1|5460|POU class 5 homeobox 1##HQ122671|POU5F1|5460|POU class 5 homeobox 1##HQ122672|POU5F1|5460|POU class 5 homeobox 1##HQ122673|POU5F1|5460|POU class 5 homeobox 1##HQ122674|POU5F1|5460|POU class 5 homeobox 1##HQ122675|POU5F1|5460|POU class 5 homeobox 1##HQ122860|POU5F1P4|645682|POU class 5 homeobox 1 pseudogene 4##HQ258221|POU5F1|5460|POU class 5 homeobox 1##HQ258573|POU5F1|5460|POU class 5 homeobox 1##BC069246|POU5F1|5460|POU class 5 homeobox 1##Z11898|POU5F1|5460|POU class 5 homeobox 1##AM851115|POU5F1|5460|POU class 5 homeobox 1##AM851118|POU5F1|5460|POU class 5 homeobox 1##AM851116|POU5F1|5460|POU class 5 homeobox 1##AM851117|POU5F1|5460|POU class 5 homeobox 1##AM851119|POU5F1|5460|POU class 5 homeobox 1##AM851120|POU5F1|5460|POU class 5 homeobox 1##BC117435|POU5F1|5460|POU class 5 homeobox 1##BC117437|POU5F1|5460|POU class 5 homeobox 1##NM_002701|POU5F1|5460|POU class 5 homeobox 1##DQ486515|POU5F1|5460|POU class 5 homeobox 1##DQ486516|POU5F1|5460|POU class 5 homeobox 1##NM_001173531|POU5F1|5460|POU class 5 homeobox 1##NM_203289|POU5F1|5460|POU class 5 homeobox 1##S53374|TCF19|6941|transcription factor 19##M28207|HLA-C|3107|major histocompatibility complex, class I, C##M24096|HLA-C|3107|major histocompatibility complex, class I, C##M21963|HLA-C|3107|major histocompatibility complex, class I, C##U07230|HLA-C|3107|major histocompatibility complex, class I, C##U74387|HLA-B|3106|major histocompatibility complex, class I, B##AJ005199|HLA-C|3107|major histocompatibility complex, class I, C##AJ440716|HLA-C|3107|major histocompatibility complex, class I, C##AJ537578|HLA-C|3107|major histocompatibility complex, class I, C##D83741|HLA-C|3107|major histocompatibility complex, class I, C##M11886|HLA-C|3107|major histocompatibility complex, class I, C##M24031|HLA-C|3107|major histocompatibility complex, class I, C##M28206|HLA-C|3107|major histocompatibility complex, class I, C##M26712|HLA-C|3107|major histocompatibility complex, class I, C##BC007814|HLA-C|3107|major histocompatibility complex, class I, C##BC010542|HLA-C|3107|major histocompatibility complex, class I, C##AF168611|HLA-C|3107|major histocompatibility complex, class I, C##AF196489|HLA-C|3107|major histocompatibility complex, class I, C##AF405691|HLA-C|3107|major histocompatibility complex, class I, C##AJ010748|HLA-C|3107|major histocompatibility complex, class I, C##AJ010749|HLA-C|3107|major histocompatibility complex, class I, C##AM237285|HLA-C|3107|major histocompatibility complex, class I, C##AY732487|HLA-C|3107|major histocompatibility complex, class I, C##D38526|HLA-C|3107|major histocompatibility complex, class I, C##D49552|HLA-C|3107|major histocompatibility complex, class I, C##D49819|HLA-C|3107|major histocompatibility complex, class I, C##D50852|HLA-C|3107|major histocompatibility complex, class I, C##D50853|HLA-C|3107|major histocompatibility complex, class I, C##D50854|HLA-C|3107|major histocompatibility complex, class I, C##D64145|HLA-C|3107|major histocompatibility complex, class I, C##D64146|HLA-C|3107|major histocompatibility complex, class I, C##D64147|HLA-C|3107|major histocompatibility complex, class I, C##D64148|HLA-C|3107|major histocompatibility complex, class I, C##D64150|HLA-C|3107|major histocompatibility complex, class I, C##D64151|HLA-C|3107|major histocompatibility complex, class I, C##D64152|HLA-C|3107|major histocompatibility complex, class I, C##D83029|HLA-C|3107|major histocompatibility complex, class I, C##D83030|HLA-C|3107|major histocompatibility complex, class I, C##DQ891896|HLA-C|3107|major histocompatibility complex, class I, C##DQ895082|HLA-C|3107|major histocompatibility complex, class I, C##L38251|HLA-C|3107|major histocompatibility complex, class I, C##M26429|HLA-C|3107|major histocompatibility complex, class I, C##M26430|HLA-C|3107|major histocompatibility complex, class I, C##M84171|HLA-C|3107|major histocompatibility complex, class I, C##M84173|HLA-C|3107|major histocompatibility complex, class I, C##M84174|HLA-C|3107|major histocompatibility complex, class I, C##M84386|HLA-C|3107|major histocompatibility complex, class I, C##M99389|HLA-C|3107|major histocompatibility complex, class I, C##M99390|HLA-C|3107|major histocompatibility complex, class I, C##U06695|HLA-C|3107|major histocompatibility complex, class I, C##U06696|HLA-C|3107|major histocompatibility complex, class I, C##U09853|HLA-C|3107|major histocompatibility complex, class I, C##U41386|HLA-C|3107|major histocompatibility complex, class I, C##U41420|HLA-C|3107|major histocompatibility complex, class I, C##U57028|HLA-C|3107|major histocompatibility complex, class I, C##U62824|HLA-C|3107|major histocompatibility complex, class I, C##X76189|HLA-C|3107|major histocompatibility complex, class I, C##X82122|HLA-C|3107|major histocompatibility complex, class I, C##X83401|HLA-B|3106|major histocompatibility complex, class I, B##X97321|HLA-C|3107|major histocompatibility complex, class I, C##X98742|HLA-C|3107|major histocompatibility complex, class I, C##Y10520|HLA-C|3107|major histocompatibility complex, class I, C##Y11843|HLA-C|3107|major histocompatibility complex, class I, C##Z15144|HLA-C|3107|major histocompatibility complex, class I, C##Z33459|HLA-C|3107|major histocompatibility complex, class I, C##Z46809|HLA-C|3107|major histocompatibility complex, class I, C##Z46810|HLA-C|3107|major histocompatibility complex, class I, C##Z83247|HLA-C|3107|major histocompatibility complex, class I, C##M28160|HLA-C|3107|major histocompatibility complex, class I, C##X58536|HLA-C|3107|major histocompatibility complex, class I, C##BC002463|HLA-C|3107|major histocompatibility complex, class I, C##X70856|HLA-C|3107|major histocompatibility complex, class I, C##X70857|HLA-C|3107|major histocompatibility complex, class I, C##BC004489|HLA-C|3107|major histocompatibility complex, class I, C##BC033293|HLA-C|3107|major histocompatibility complex, class I, C##BC008457|HLA-C|3107|major histocompatibility complex, class I, C##M24097|HLA-C|3107|major histocompatibility complex, class I, C##AK130592|HLA-C|3107|major histocompatibility complex, class I, C##AK301283|HLA-C|3107|major histocompatibility complex, class I, C##AK304527|HLA-C|3107|major histocompatibility complex, class I, C##X83394|HLA-C|3107|major histocompatibility complex, class I, C##AK024836|HLA-C|3107|major histocompatibility complex, class I, C##BC041078|HLA-C|3107|major histocompatibility complex, class I, C##NM_001243042|HLA-C|3107|major histocompatibility complex, class I, C##NM_002117|HLA-C|3107|major histocompatibility complex, class I, C##U18661|HLA-B|3106|major histocompatibility complex, class I, B##M27540|HLA-B|3106|major histocompatibility complex, class I, B##AY221104|HLA-B|3106|major histocompatibility complex, class I, B##U74386|HLA-B|3106|major histocompatibility complex, class I, B##U28759|HLA-B|3106|major histocompatibility complex, class I, B##AJ002675|HLA-B|3106|major histocompatibility complex, class I, B##AJ002676|HLA-B|3106|major histocompatibility complex, class I, B##AJ002677|HLA-B|3106|major histocompatibility complex, class I, B##AJ003063|HLA-B|3106|major histocompatibility complex, class I, B##AJ223602|HLA-B|3106|major histocompatibility complex, class I, B##AY040668|HLA-B|3106|major histocompatibility complex, class I, B##AY569160|HLA-B|3106|major histocompatibility complex, class I, B##HM989017|HLA-B|3106|major histocompatibility complex, class I, B##L42545|HLA-B|3106|major histocompatibility complex, class I, B##L47338|HLA-B|3106|major histocompatibility complex, class I, B##L47986|HLA-B|3106|major histocompatibility complex, class I, B##L48400|HLA-B|3106|major histocompatibility complex, class I, B##L49343|HLA-B|3106|major histocompatibility complex, class I, B##L63544|HLA-B|3106|major histocompatibility complex, class I, B##L76252|HLA-B|3106|major histocompatibility complex, class I, B##L76933|HLA-B|3106|major histocompatibility complex, class I, B##L76935|HLA-B|3106|major histocompatibility complex, class I, B##L77114|HLA-C|3107|major histocompatibility complex, class I, C##L79935|HLA-B|3106|major histocompatibility complex, class I, B##L79936|HLA-B|3106|major histocompatibility complex, class I, B##L79937|HLA-B|3106|major histocompatibility complex, class I, B##U06697|HLA-B|3106|major histocompatibility complex, class I, B##U16298|HLA-B|3106|major histocompatibility complex, class I, B##U32678|HLA-B|3106|major histocompatibility complex, class I, B##U34619|HLA-B|3106|major histocompatibility complex, class I, B##U34810|HLA-B|3106|major histocompatibility complex, class I, B##Y07710|HLA-B|3106|major histocompatibility complex, class I, B##AJ276427|HLA-B|3106|major histocompatibility complex, class I, B##M83191|HLA-B|3106|major histocompatibility complex, class I, B##M83193|HLA-B|3106|major histocompatibility complex, class I, B##M83194|HLA-B|3106|major histocompatibility complex, class I, B##M83195|HLA-B|3106|major histocompatibility complex, class I, B##U58110|HLA-B|3106|major histocompatibility complex, class I, B	0.0	
chr15	66121645	66121750	reg1015232.p1	7.399	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-37104	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	-37224	-	AF062922 NM_004727	-207428	+	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	40150	+	TSC_hg19_v1_chr15_-_66321664 AK054827	199996	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	424380	-	AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11	0.0	
chr2	75384718	75384898	reg1019817.p1	7.399	+	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-199023	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-322557	-	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	-323548	+	AK289765 NM_001058 NM_015727	41820	-	BC016157 TSC_hg19_v1_chr2_-_75788066	403239	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	403282	-	NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2##AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A	0.6314	CTCF.p2:-17:0.631
chr8	56923280	56923419	reg1019694.p1	7.399	+	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-130829	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	-130954	+	TSC_hg19_v1_chr8_+_56792383 M16038 NM_001111097 NM_002350 BC126456 BC126458	-130984	+	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	63737	-	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	103191	-	TSC_hg19_v1_chr8_-_57123833 U65002	200486	-	AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M16038|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_001111097|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_002350|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126456|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126458|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1	0.391276	CTCF.p2:-14:0.391
chr12	116435992	116436087	reg1017548.p1	7.398	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-1313899	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1589821	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1592115	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	278911	-	TSC_hg19_v1_chr12_-_116715263 AY338463	279121	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	535190	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.99784	CTCF.p2:14:0.998
chr3	113271850	113271957	reg1019055.p2	7.398	+	NM_017699	-20686	+	AY099107 BC036951 TSC_hg19_v1_chr3_-_113234023 AK057966 AL832327 AL832148 NM_144718	-37910	-	TSC_hg19_v1_chr3_-_113233690 AK296160	-38217	-	TSC_hg19_v1_chr3_-_113415490 BC043383 NM_001009899	143509	-	AK296456 TSC_hg19_v1_chr3_-_113464788	192811	-	TSC_hg19_v1_chr3_-_113465043 CR749314 AK023090 AK307184 BC012731 AK311403 AK023256	193140	-	NM_017699|SIDT1|54847|SID1 transmembrane family, member 1##AY099107|SPICE1|152185|spindle and centriole associated protein 1##BC036951|SPICE1|152185|spindle and centriole associated protein 1##AK057966|SPICE1|152185|spindle and centriole associated protein 1##AL832327|SPICE1|152185|spindle and centriole associated protein 1##AL832148|SPICE1|152185|spindle and centriole associated protein 1##NM_144718|SPICE1|152185|spindle and centriole associated protein 1##AK296160|SPICE1|152185|spindle and centriole associated protein 1##BC043383|KIAA2018|205717|KIAA2018##NM_001009899|KIAA2018|205717|KIAA2018##AK296456|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##CR749314|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK023090|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK307184|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##BC012731|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK023256|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit	0.015609	
chr5	57075338	57075494	reg1016500.p2	7.398	+	BC137470 BC137473 BX648504 NM_001017992	-296822	-	NM_001127236 AL136844 AB463051 AM392551 AM393442	-565488	+	BC113004 NM_001127235	-604143	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	680520	-	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	711878	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	803503	+	BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family	0.882362	CTCF.p2:-8:0.831
chr12	95611295	95611403	reg1018552.p2	7.397	+	TSC_hg19_v1_chr12_-_95611206 BC125225 BC125226 BX538322 AK124904 NM_018351	-113	-	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	-144051	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	-213833	-	TSC_hg19_v1_chr12_+_95611582 NM_017599 AK001338 AK225303 AK309943 AK225356 BC014443 AK307864 AL137497 BC064939 BC028597	345	+	TSC_hg19_v1_chr12_+_95676175 AL133113	64869	+	NM_006838 AK300836 TSC_hg19_v1_chr12_+_95867927 AK315559 U13261 AK055692 U29607 BC013782 AK091730 AX747149 AB463882 DQ891013 DQ894193	256548	+	BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein##AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein##AL133113|VEZT|55591|vezatin, adherens junctions transmembrane protein##NM_006838|METAP2|10988|methionyl aminopeptidase 2##AK300836|METAP2|10988|methionyl aminopeptidase 2##AK315559|METAP2|10988|methionyl aminopeptidase 2##U13261|METAP2|10988|methionyl aminopeptidase 2##AK055692|METAP2|10988|methionyl aminopeptidase 2##BC013782|METAP2|10988|methionyl aminopeptidase 2##AK091730|METAP2|10988|methionyl aminopeptidase 2##DQ891013|METAP2|10988|methionyl aminopeptidase 2##DQ894193|METAP2|10988|methionyl aminopeptidase 2	0.867635	CTCF.p2:13:0.868
chr10	35485071	35485209	reg1017185.p2	7.396	+	AK289379 NM_182721 NM_182722 NM_182723 NM_182724 NM_182725 AK291566	-310	+	D14826 NM_182717 NM_182718 NM_182719 NM_182720 AK290612 AF069065 U44836	-1055	+	NM_182769 NM_182770 AF417233 AY292864 BC090051 AK301906	-20609	+	AF429969 AK057280 NM_181698	50812	+	TSC_hg19_v1_chr10_+_35625400 AK314666	140316	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	140654	+	AK289379|CREM|1390|cAMP responsive element modulator##NM_182721|CREM|1390|cAMP responsive element modulator##NM_182722|CREM|1390|cAMP responsive element modulator##NM_182723|CREM|1390|cAMP responsive element modulator##NM_182724|CREM|1390|cAMP responsive element modulator##NM_182725|CREM|1390|cAMP responsive element modulator##AK291566|CREM|1390|cAMP responsive element modulator##D14826|CREM|1390|cAMP responsive element modulator##NM_182717|CREM|1390|cAMP responsive element modulator##NM_182718|CREM|1390|cAMP responsive element modulator##NM_182719|CREM|1390|cAMP responsive element modulator##NM_182720|CREM|1390|cAMP responsive element modulator##AK290612|CREM|1390|cAMP responsive element modulator##AF069065|CREM|1390|cAMP responsive element modulator##U44836|CREM|1390|cAMP responsive element modulator##NM_182769|CREM|1390|cAMP responsive element modulator##NM_182770|CREM|1390|cAMP responsive element modulator##AF417233|CREM|1390|cAMP responsive element modulator##AY292864|CREM|1390|cAMP responsive element modulator##BC090051|CREM|1390|cAMP responsive element modulator##AK301906|CREM|1390|cAMP responsive element modulator##AF429969|CCNY|219771|cyclin Y##AK057280|CCNY|219771|cyclin Y##NM_181698|CCNY|219771|cyclin Y##AK314666|CCNY|219771|cyclin Y##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y	0.0	
chr12	121499807	121499916	reg1017303.p1	7.396	+	TSC_hg19_v1_chr12_-_121476781 HQ258301 AJ225089 AK314419 NM_003733 NM_198213 AK023956 BC117408 BC117410	-23078	-	TSC_hg19_v1_chr12_-_121454291 AK222630 AK299170 AK301566 AK022510 AK225162 NM_022895 AK307971	-45567	-	TSC_hg19_v1_chr12_-_121454230 BC014661	-45617	-	NM_002562 TSC_hg19_v1_chr12_+_121570744 AK294126 AK290405 AK296432 BC011913 BC121157 BC121158 AB209709 BC007679 AK090866 AK225163 AX746656 Y09561 GQ180122 DQ893457 DQ896337 AB590390 CU680114 AY847298 AY847299 AY847300 AY847301 AY847302 AY847303 AY847304 DQ399293	70840	+	U83993 NM_002560	147800	+	TSC_hg19_v1_chr12_+_121647931 AK293599 AK293660 AK297704 AK308549 AK308868 BC017458	148031	+	HQ258301|OASL|8638|2'-5'-oligoadenylate synthetase-like##AJ225089|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK314419|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_003733|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_198213|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK023956|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117408|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117410|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK222630|C12orf43|64897|chromosome 12 open reading frame 43##AK299170|C12orf43|64897|chromosome 12 open reading frame 43##AK301566|C12orf43|64897|chromosome 12 open reading frame 43##AK022510|C12orf43|64897|chromosome 12 open reading frame 43##AK225162|C12orf43|64897|chromosome 12 open reading frame 43##NM_022895|C12orf43|64897|chromosome 12 open reading frame 43##AK307971|C12orf43|64897|chromosome 12 open reading frame 43##BC014661|C12orf43|64897|chromosome 12 open reading frame 43##NM_002562|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK294126|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK290405|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK296432|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC011913|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121157|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121158|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AB209709|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC007679|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK090866|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK225163|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##Y09561|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##GQ180122|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ893457|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ896337|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847298|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847299|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847300|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847301|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847302|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847303|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847304|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ399293|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##U83993|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##NM_002560|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293599|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293660|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK297704|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308549|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308868|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC017458|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4	0.036002	
chr1	213418071	213418201	reg1019257.p1	7.396	+	TSC_hg19_v1_chr1_+_213224716 AB070706 EF491805	-193376	+	TSC_hg19_v1_chr1_+_213224692 BC104769 BC143449 BC143473 BC143474	-193459	+	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	-193549	+	AK298182 TSC_hg19_v1_chr1_+_214161296 U44060	743153	+	BC024201 NM_002763	743723	+	TSC_hg19_v1_chr1_+_214454550 BC068511 BC049367 BC094747 BC057793 NM_020197 AF226053 BC098133 BC098276 BC098305 BC098335 BC028104 AK313868 AB590916 BC039890	1036301	+	AB070706|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC104769|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143449|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143473|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143474|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK298182|PROX1|5629|prospero homeobox 1##U44060|PROX1|5629|prospero homeobox 1##BC024201|PROX1|5629|prospero homeobox 1##NM_002763|PROX1|5629|prospero homeobox 1##BC068511|SMYD2|56950|SET and MYND domain containing 2##BC049367|SMYD2|56950|SET and MYND domain containing 2##BC094747|SMYD2|56950|SET and MYND domain containing 2##BC057793|SMYD2|56950|SET and MYND domain containing 2##NM_020197|SMYD2|56950|SET and MYND domain containing 2##AF226053|SMYD2|56950|SET and MYND domain containing 2##BC098133|SMYD2|56950|SET and MYND domain containing 2##BC098276|SMYD2|56950|SET and MYND domain containing 2##BC098305|SMYD2|56950|SET and MYND domain containing 2##BC098335|SMYD2|56950|SET and MYND domain containing 2##BC028104|SMYD2|56950|SET and MYND domain containing 2##AK313868|SMYD2|56950|SET and MYND domain containing 2##BC039890|SMYD2|56950|SET and MYND domain containing 2	0.9998	CTCF.p2:-17:1.000
chr4	4163153	4163250	reg1014268.p1	7.396	+	BC044637 TSC_hg19_v1_chr4_-_3957162	-206046	-	J03853 NM_000683	-394906	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-395083	+	BC130430 BC130432 NM_177998	65416	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	86747	-	TSC_hg19_v1_chr4_-_4291782 AL136750 NM_001145725	128566	-	BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128##AL136750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_001145725|LYAR|55646|Ly1 antibody reactive homolog (mouse)	0.761895	CTCF.p2:57:0.740
chr17	61519935	61520053	reg1018286.p2	7.395	+	BC091485 NM_001017917	-1804	-	BC144357 TSC_hg19_v1_chr17_+_61271368	-248633	+	NM_025185	-433097	+	AK095244 NM_001017916 TSC_hg19_v1_chr17_-_61523715 AK301541 AK294403 BC002976 AK303177 AK316606 NM_001915	3642	-	TSC_hg19_v1_chr17_+_61554421 AK296566 AK309514 NM_000789 AK300516 AB208971 J04144	34434	+	NM_001178057 NM_152830 BC036375 X16295 AK301988 AK302019 M26657 M29981	42197	+	BC091485|CYB561|1534|cytochrome b-561##NM_001017917|CYB561|1534|cytochrome b-561##BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##AK095244|CYB561|1534|cytochrome b-561##NM_001017916|CYB561|1534|cytochrome b-561##AK301541|CYB561|1534|cytochrome b-561##AK294403|CYB561|1534|cytochrome b-561##BC002976|CYB561|1534|cytochrome b-561##AK303177|CYB561|1534|cytochrome b-561##AK316606|CYB561|1534|cytochrome b-561##NM_001915|CYB561|1534|cytochrome b-561##AK296566|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK309514|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##NM_000789|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK300516|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AB208971|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##J04144|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##NM_001178057|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##NM_152830|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##X16295|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK301988|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK302019|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##M26657|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##M29981|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	0.260648	CTCF.p2:4:0.261
chr12	19339791	19339914	reg1016327.p2	7.394	+	TSC_hg19_v1_chr12_+_19282701 NM_001143821 NM_001190860 NM_019012 BC070174 BC044245 AK297391 AK295151 AK026344 AF302150 BC127091 BC127092 AB051473	-57287	+	BC016745 NM_033328 AB053259 AK058174 CU677705	-448732	+	AF532185 NM_033123 AK314516 AY035866 AK292279	-448899	-	TSC_hg19_v1_chr12_+_19592425 AK131361 NM_001114176 NM_153207 AK126973 BC022220	252667	+	TSC_hg19_v1_chr12_+_19592783 AB209384	252943	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	253336	+	NM_001143821|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##NM_001190860|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##NM_019012|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC070174|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC044245|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AK297391|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AK295151|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AK026344|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AF302150|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC127091|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC127092|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AB051473|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC016745|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##NM_033328|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AB053259|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AK058174|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1##AK131361|AEBP2|121536|AE binding protein 2##NM_001114176|AEBP2|121536|AE binding protein 2##NM_153207|AEBP2|121536|AE binding protein 2##AK126973|AEBP2|121536|AE binding protein 2##BC022220|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2	0.999066	CTCF.p2:1:0.999
chr7	101182207	101182344	reg1018107.p2	7.394	+	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	-176058	+	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	-217237	-	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-286709	-	BC002778 NM_138403	90300	-	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	276934	+	M74099 NM_181552	278606	+	NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1	0.999455	CTCF.p2:-4:0.999
chr10	56162454	56162593	reg1019064.p1	7.393	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-1631097	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-2088408	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-2703176	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	398475	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	1196251	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	1958491	-	AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor	0.990494	CTCF.p2:22:0.990
chr12	85236312	85236435	reg1017801.p2	7.392	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	-2155112	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	-2155456	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	-2155673	+	AK291207 AK022853 TSC_hg19_v1_chr12_-_85306547	70170	-	TSC_hg19_v1_chr12_-_85306575 BC022253 BC070040	70199	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	70219	-	AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK291207|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK022853|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC022253|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC070040|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15	0.66908	CTCF.p2:9:0.669
chr1	40075384	40075503	reg1019828.p1	7.392	+	TSC_hg19_v1_chr1_-_40042519 NM_001135653 NM_001135654 NM_003819	-32924	-	BC094755 TSC_hg19_v1_chr1_-_40042463	-32967	-	U75686 BC065540 TSC_hg19_v1_chr1_-_40042460 BC071591	-33006	-	TSC_hg19_v1_chr1_-_40098640 AK300463	23212	-	AF311885 EU446871 TSC_hg19_v1_chr1_-_40105307 AB463718 AJ272215 BC006087	29873	-	TSC_hg19_v1_chr1_-_40105343 NM_014571	29902	-	NM_001135653|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##NM_001135654|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##NM_003819|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC094755|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##U75686|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC065540|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC071591|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##AK300463|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AF311885|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##EU446871|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AJ272215|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##BC006087|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##NM_014571|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like	0.97615	CTCF.p2:18:0.976
chr1	54873379	54873559	reg1017598.p2	7.392	+	TSC_hg19_v1_chr1_-_54872087 NM_001009955	-1385	-	NM_018070 NM_145716 TSC_hg19_v1_chr1_-_54872066	-1447	-	CU688156 AK289474 BC003605 BC127866 BC066365 TSC_hg19_v1_chr1_-_54871828 AF500116	-1681	-	TSC_hg19_v1_chr1_+_55007956 AK091112	134492	+	NM_015547 NM_147161 TSC_hg19_v1_chr1_+_55013900 BC001517 AK023937 AK223570 AB014607 BC093844 BC093846 AF416921 AF416922	140425	+	CU676764 AY358629 BC015993 BC020874 NM_176782 AK091901 AX747244	215679	-	NM_001009955|SSBP3|23648|single stranded DNA binding protein 3##NM_018070|SSBP3|23648|single stranded DNA binding protein 3##NM_145716|SSBP3|23648|single stranded DNA binding protein 3##AK289474|SSBP3|23648|single stranded DNA binding protein 3##BC003605|SSBP3|23648|single stranded DNA binding protein 3##BC066365|SSBP3|23648|single stranded DNA binding protein 3##AF500116|SSBP3|23648|single stranded DNA binding protein 3##AK091112|ACOT11|26027|acyl-CoA thioesterase 11##NM_015547|ACOT11|26027|acyl-CoA thioesterase 11##NM_147161|ACOT11|26027|acyl-CoA thioesterase 11##BC001517|ACOT11|26027|acyl-CoA thioesterase 11##AK023937|ACOT11|26027|acyl-CoA thioesterase 11##AK223570|ACOT11|26027|acyl-CoA thioesterase 11##AB014607|ACOT11|26027|acyl-CoA thioesterase 11##BC093844|ACOT11|26027|acyl-CoA thioesterase 11##BC093846|ACOT11|26027|acyl-CoA thioesterase 11##AF416921|ACOT11|26027|acyl-CoA thioesterase 11##AF416922|ACOT11|26027|acyl-CoA thioesterase 11##AY358629|FAM151A|338094|family with sequence similarity 151, member A##BC015993|FAM151A|338094|family with sequence similarity 151, member A##BC020874|FAM151A|338094|family with sequence similarity 151, member A##NM_176782|FAM151A|338094|family with sequence similarity 151, member A##AK091901|FAM151A|338094|family with sequence similarity 151, member A	0.0	
chr2	175468151	175468298	reg1018880.p1	7.392	+	TSC_hg19_v1_chr2_-_175462533 BC002914 X86019	-5743	-	BC036681 AK091200 AK315125 AX746845 BC028730 AL834154 TSC_hg19_v1_chr2_-_175351812 AK307896 BX537947 NM_001033045 NM_152529 BC035037	-116427	-	BC119684 BC119685 BC119685 TSC_hg19_v1_chr2_+_175260519	-207666	+	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	31073	-	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	79530	-	TSC_hg19_v1_chr2_+_175584527 DQ895855	116354	+	BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1##X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC036681|GPR155|151556|G protein-coupled receptor 155##AK091200|GPR155|151556|G protein-coupled receptor 155##AK315125|GPR155|151556|G protein-coupled receptor 155##BC028730|GPR155|151556|G protein-coupled receptor 155##AL834154|GPR155|151556|G protein-coupled receptor 155##AK307896|GPR155|151556|G protein-coupled receptor 155##BX537947|GPR155|151556|G protein-coupled receptor 155##NM_001033045|GPR155|151556|G protein-coupled receptor 155##NM_152529|GPR155|151556|G protein-coupled receptor 155##BC035037|GPR155|151556|G protein-coupled receptor 155##BC119684|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##BC119685|SCRN3|79634|secernin 3##AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1##DQ895855|H3F3A|3020|H3 histone, family 3A	0.305849	CTCF.p2:7:0.306
chr5	6765932	6766069	reg1019706.p1	7.392	+	AK308405 NM_001171806 AK303516	-19878	+	NM_001171805 NM_006999 AF089896 BC084567	-51250	+	M32313 TSC_hg19_v1_chr5_+_6633683 BT006834 CU679027 DQ891537 DQ894726	-132326	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	630268	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	1085259	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	1103132	-	AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##M32313|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##BT006834|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##DQ891537|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##DQ894726|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3	0.0	
chr9	34760563	34760690	reg1018570.p1	7.392	+	AK301951 AK302320 NM_001141917	-31128	-	AF001979 CR450326 AB463486 DQ892048 DQ895242 AY358887 U88320 BC027918 AB002409 AK311901 TSC_hg19_v1_chr9_-_34710134 NM_002989	-50522	-	CR456868 U77180 AB590424 DQ895236 EU176240 U88321 BC027968 AK311945 AX772806 AB000887 NM_006274	-69422	-	TSC_hg19_v1_chr9_+_34958175 BC041169 NM_015297	197555	+	AB028968 TSC_hg19_v1_chr9_+_34958324	197697	+	NM_001135004 NM_012266 TSC_hg19_v1_chr9_+_34989739 AK023253 BC012115 AK314671 AF087870	229091	+	AK302320|FAM205A|259308|family with sequence similarity 205, member A##NM_001141917|FAM205A|259308|family with sequence similarity 205, member A##AF001979|CCL21|6366|chemokine (C-C motif) ligand 21##CR450326|CCL21|6366|chemokine (C-C motif) ligand 21##DQ892048|CCL21|6366|chemokine (C-C motif) ligand 21##DQ895242|CCL21|6366|chemokine (C-C motif) ligand 21##AY358887|CCL21|6366|chemokine (C-C motif) ligand 21##U88320|CCL21|6366|chemokine (C-C motif) ligand 21##BC027918|CCL21|6366|chemokine (C-C motif) ligand 21##AB002409|CCL21|6366|chemokine (C-C motif) ligand 21##AK311901|CCL21|6366|chemokine (C-C motif) ligand 21##NM_002989|CCL21|6366|chemokine (C-C motif) ligand 21##CR456868|CCL19|6363|chemokine (C-C motif) ligand 19##U77180|CCL19|6363|chemokine (C-C motif) ligand 19##DQ895236|CCL19|6363|chemokine (C-C motif) ligand 19##EU176240|CCL19|6363|chemokine (C-C motif) ligand 19##U88321|CCL19|6363|chemokine (C-C motif) ligand 19##BC027968|CCL19|6363|chemokine (C-C motif) ligand 19##AK311945|CCL19|6363|chemokine (C-C motif) ligand 19##AX772806|CCL19|6363|chemokine (C-C motif) ligand 19##AB000887|CCL19|6363|chemokine (C-C motif) ligand 19##NM_006274|CCL19|6363|chemokine (C-C motif) ligand 19##BC041169|KIAA1045|23349|KIAA1045##NM_015297|KIAA1045|23349|KIAA1045##AB028968|KIAA1045|23349|KIAA1045##NM_001135004|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##NM_012266|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK023253|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK314671|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AF087870|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5	0.982749	CTCF.p2:15:0.983
chr2	160664091	160664206	reg1019155.p2	7.391	+	TSC_hg19_v1_chr2_-_160654754 AK304422 AY314007 NM_001198763 NM_001198764 NM_014880	-9392	-	TSC_hg19_v1_chr2_-_160654668 D14664 AF499000 AK291279 AK125081	-9449	-	TSC_hg19_v1_chr2_+_160569027 BC065014	-95108	+	AF064827 AY184222 AY314006 TSC_hg19_v1_chr2_-_160761248 AF011333 AK310678 BC057232	97078	-	NM_001198759 NM_001198760 NM_002349 TSC_hg19_v1_chr2_-_160761270	97142	-	BC140823 BC144631 TSC_hg19_v1_chr2_-_160919021	254831	-	AK304422|CD302|9936|CD302 molecule##AY314007|CD302|9936|CD302 molecule##NM_001198763|CD302|9936|CD302 molecule##NM_001198764|CD302|9936|CD302 molecule##NM_014880|CD302|9936|CD302 molecule##D14664|CD302|9936|CD302 molecule##AF499000|CD302|9936|CD302 molecule##AK291279|CD302|9936|CD302 molecule##AK125081|CD302|9936|CD302 molecule##BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7##AF064827|LY75|4065|lymphocyte antigen 75##AY184222|LY75-CD302|100526664|LY75-CD302 readthrough##AY314006|LY75-CD302|100526664|LY75-CD302 readthrough##AF011333|LY75|4065|lymphocyte antigen 75##AK310678|LY75|4065|lymphocyte antigen 75##BC057232|LY75|4065|lymphocyte antigen 75##NM_001198759|LY75-CD302|100526664|LY75-CD302 readthrough##NM_001198760|LY75-CD302|100526664|LY75-CD302 readthrough##NM_002349|LY75|4065|lymphocyte antigen 75##BC140823|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC144631|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa	0.987328	CTCF.p2:2:0.987
chr8	128219304	128219463	reg1020424.p1	7.391	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-648659	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-648828	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1255970	-	DQ486513 NM_001159542	208473	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	528942	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	529107	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.016899	
chrX	1700195	1700306	reg1017212.p2	7.391	+	BC043610 GQ280263 NM_178129 AK126147	-44212	-	AK301844 NM_001173473	-127599	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-128449	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	10279	+	NM_004043 U11090	14097	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	33753	+	BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase	0.321483	CTCF.p2:-42:0.308
chr14	93579255	93579391	reg1017459.p1	7.390	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-189726	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	-189879	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-318637	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	2268	-	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	2891	-	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	71877	-	AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1	0.999956	CTCF.p2:15:1.000
chr16	87990552	87990665	reg1018181.p1	7.390	+	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	-5440	+	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	-20461	-	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	-87533	-	AK315535 NM_001173542	2868	+	AK094158 NM_001173543	13015	+	NM_001127464	503270	+	AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein##AK094158|BANP|54971|BTG3 associated nuclear protein##NM_001173543|BANP|54971|BTG3 associated nuclear protein##NM_001127464|ZNF469|84627|zinc finger protein 469	0.533032	CTCF.p2:13:0.533
chr4	156275221	156275347	reg1019434.p1	7.390	+	NM_000910 U42766	-145504	+	NM_144979 AK302720 BC028588	-572822	+	TSC_hg19_v1_chr4_+_155665151 AY546085 AY546086 NM_004744 AF071510	-610068	+	TSC_hg19_v1_chr4_-_156297959 BC022852	22671	-	TSC_hg19_v1_chr4_-_156297990 AK301075 BC146864 BC128540 BC128541 BC056683	22724	-	TSC_hg19_v1_chr4_-_156298108 AK024812 AY690636 NM_001039580	22827	-	NM_000910|NPY2R|4887|neuropeptide Y receptor Y2##U42766|NPY2R|4887|neuropeptide Y receptor Y2##NM_144979|RBM46|166863|RNA binding motif protein 46##AK302720|RBM46|166863|RNA binding motif protein 46##BC028588|RBM46|166863|RNA binding motif protein 46##AY546085|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AY546086|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_004744|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AF071510|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##BC022852|MAP9|79884|microtubule-associated protein 9##AK301075|MAP9|79884|microtubule-associated protein 9##BC146864|MAP9|79884|microtubule-associated protein 9##BC128540|MAP9|79884|microtubule-associated protein 9##BC128541|MAP9|79884|microtubule-associated protein 9##BC056683|MAP9|79884|microtubule-associated protein 9##AK024812|MAP9|79884|microtubule-associated protein 9##AY690636|MAP9|79884|microtubule-associated protein 9##NM_001039580|MAP9|79884|microtubule-associated protein 9	0.161365	
chr13	98401615	98401767	reg1021468.p1	7.388	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	-314989	+	TSC_hg19_v1_chr13_+_98086350 AK315139 NM_021033 BC041333	-315254	+	TSC_hg19_v1_chr13_+_97999294 AF339832	-402397	+	NM_002271 BC045640	204246	+	TSC_hg19_v1_chr13_+_98628928 BX648222 AK303494 AK225286 BC001497 BC019309 DQ893033 EU176755 U72761	227141	+	TSC_hg19_v1_chr13_+_98795412 NM_001001715 NM_005766	393730	+	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family##AK315139|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_021033|RAP2A|5911|RAP2A, member of RAS oncogene family##BC041333|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_002271|IPO5|3843|importin 5##BC045640|IPO5|3843|importin 5##BX648222|IPO5|3843|importin 5##AK303494|IPO5|3843|importin 5##AK225286|IPO5|3843|importin 5##BC001497|IPO5|3843|importin 5##BC019309|IPO5|3843|importin 5##DQ893033|IPO5|3843|importin 5##EU176755|IPO5|3843|importin 5##U72761|IPO5|3843|importin 5##NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	0.985179	CTCF.p2:-20:0.985
chr17	59049266	59049408	reg1020325.p1	7.387	+	TSC_hg19_v1_chr17_+_58755255 NM_001099432 NM_017679 AK304791 AK225757 BC017390 AK314744 AF361219 BC117275 BC143386 BC143387 AK025510	-294124	+	TSC_hg19_v1_chr17_+_58677710 BC016480 BC042418 BC032826 BC033893 DQ891047 EU176552 BT009780	-371648	+	TSC_hg19_v1_chr17_+_58677553 BC060877 NM_003620 AK312902 AK299773 U78305	-371793	+	TSC_hg19_v1_chr17_+_59477203 BC052566 NM_005994 AK127429 BC070054	427899	+	TSC_hg19_v1_chr17_+_59477477 U28049	428159	+	TSC_hg19_v1_chr17_+_59477713 AL832900 AB209378	428380	+	NM_001099432|BCAS3|54828|breast carcinoma amplified sequence 3##NM_017679|BCAS3|54828|breast carcinoma amplified sequence 3##AK304791|BCAS3|54828|breast carcinoma amplified sequence 3##AK225757|BCAS3|54828|breast carcinoma amplified sequence 3##BC017390|BCAS3|54828|breast carcinoma amplified sequence 3##AK314744|BCAS3|54828|breast carcinoma amplified sequence 3##AF361219|BCAS3|54828|breast carcinoma amplified sequence 3##BC117275|BCAS3|54828|breast carcinoma amplified sequence 3##BC143386|BCAS3|54828|breast carcinoma amplified sequence 3##BC143387|BCAS3|54828|breast carcinoma amplified sequence 3##AK025510|BCAS3|54828|breast carcinoma amplified sequence 3##BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC052566|TBX2|6909|T-box 2##NM_005994|TBX2|6909|T-box 2##BC070054|TBX2|6909|T-box 2##U28049|TBX2|6909|T-box 2##AL832900|TBX2|6909|T-box 2##AB209378|TBX2|6909|T-box 2	0.0	
chr19	34836900	34837004	reg1017644.p1	7.387	+	TSC_hg19_v1_chr19_+_34745535 NM_014686 AB002353 BX648432	-91442	+	TSC_hg19_v1_chr19_+_34710343 AL117499	-126572	+	TSC_hg19_v1_chr19_+_34663440 AL834398 AK027643 AB069974 AB069975	-173484	+	TSC_hg19_v1_chr19_+_34856083 NM_001184722 AK294396 NM_000175	18888	+	TSC_hg19_v1_chr19_+_34856150 AB209575 AK301103	19186	+	AK293446 TSC_hg19_v1_chr19_+_34856160 BC004982 K03515 X16539 DQ892924 DQ896173	19210	+	NM_014686|KIAA0355|9710|KIAA0355##AB002353|KIAA0355|9710|KIAA0355##AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AL834398|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK027643|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069974|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069975|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_001184722|GPI|2821|glucose-6-phosphate isomerase##AK294396|GPI|2821|glucose-6-phosphate isomerase##NM_000175|GPI|2821|glucose-6-phosphate isomerase##AB209575|GPI|2821|glucose-6-phosphate isomerase##AK301103|GPI|2821|glucose-6-phosphate isomerase##AK293446|GPI|2821|glucose-6-phosphate isomerase##BC004982|GPI|2821|glucose-6-phosphate isomerase##K03515|GPI|2821|glucose-6-phosphate isomerase##X16539|GPI|2821|glucose-6-phosphate isomerase##DQ892924|GPI|2821|glucose-6-phosphate isomerase##DQ896173|GPI|2821|glucose-6-phosphate isomerase	0.998828	CTCF.p2:14:0.999
chrX	85106578	85106724	reg1020830.p1	7.386	+	TSC_hg19_v1_chrX_-_84634749 AF309774 NM_024921	-471902	-	TSC_hg19_v1_chrX_-_84634671 AK314295 AK025039 AK290360 BC017500	-471955	-	TSC_hg19_v1_chrX_-_84634396 DQ892227	-472224	-	AK299323 BC032237 BC130494 BC130496 AK291160 AK312443 NM_000390 NM_001145414 X78121	195900	-	TSC_hg19_v1_chrX_+_85403454 AK290596 NM_001139514 NM_053281	296801	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	296814	+	AF309774|POF1B|79983|premature ovarian failure, 1B##NM_024921|POF1B|79983|premature ovarian failure, 1B##AK314295|POF1B|79983|premature ovarian failure, 1B##AK025039|POF1B|79983|premature ovarian failure, 1B##AK290360|POF1B|79983|premature ovarian failure, 1B##BC017500|POF1B|79983|premature ovarian failure, 1B##DQ892227|POF1B|79983|premature ovarian failure, 1B##AK299323|CHM|1121|choroideremia (Rab escort protein 1)##BC032237|CHM|1121|choroideremia (Rab escort protein 1)##BC130494|CHM|1121|choroideremia (Rab escort protein 1)##BC130496|CHM|1121|choroideremia (Rab escort protein 1)##AK291160|CHM|1121|choroideremia (Rab escort protein 1)##AK312443|CHM|1121|choroideremia (Rab escort protein 1)##NM_000390|CHM|1121|choroideremia (Rab escort protein 1)##NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)##X78121|CHM|1121|choroideremia (Rab escort protein 1)##AK290596|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139514|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_053281|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)	0.176937	
chr2	176279752	176279845	reg1016333.p1	7.385	+	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	-233494	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	-246903	-	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	-409785	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	587177	-	NM_001080458	668891	-	TSC_hg19_v1_chr2_+_176957451 NM_000523 AB463753	677746	+	CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715##NM_001080458|EVX2|344191|even-skipped homeobox 2##NM_000523|HOXD13|3239|homeobox D13	0.053581	
chr3	73557665	73557772	reg1019333.p2	7.385	+	BC051316 BC064501 NM_018029	-446909	+	TSC_hg19_v1_chr3_+_73046081 AF327345 NM_174907 BC128136 BC128137	-511598	+	TSC_hg19_v1_chr3_+_73045984 BC110889	-511727	+	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	116320	-	AB384611 BC150608 NM_020872	1012584	-	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	1926431	-	BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene	0.954248	CTCF.p2:-5:0.915
chr5	49621182	49621327	reg1019709.p1	7.385	+	AF488549 NM_021072	-3925035	-	AF064876 TSC_hg19_v1_chr5_-_45695947	-3925363	-	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	-4812227	+	AK300860 TSC_hg19_v1_chr5_-_49737200 BC059398	115945	-	TSC_hg19_v1_chr5_-_49737229 NM_198449	115989	-	AK298680 AK314466 BC105789 NM_001178055	340478	+	AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AK300860|EMB|133418|embigin##BC059398|EMB|133418|embigin##NM_198449|EMB|133418|embigin##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	0.997506	CTCF.p2:21:0.998
chr10	102694167	102694283	reg1020021.p2	7.384	+	TSC_hg19_v1_chr10_+_102672719 AK292565 AL832343 AL833126 BC015131 BC047715 BC030565 BC064526 BC020915 BC073832 AL832383 AB385255	-21450	+	AF460991 AF460992 NM_001136123 NM_001243770 NM_018121	-21900	+	TSC_hg19_v1_chr10_+_102505338 L25597 M89470 NM_000278 NM_003987 NM_003988 NM_003989 NM_003990	-188823	+	TSC_hg19_v1_chr10_+_102729286 BC051030 AK297431	35051	+	NM_001203244 NM_017893	38060	+	AF086122 TSC_hg19_v1_chr10_-_102747046 BC031287	52817	-	AK292565|FAM178A|55719|family with sequence similarity 178, member A##AL832343|FAM178A|55719|family with sequence similarity 178, member A##AL833126|FAM178A|55719|family with sequence similarity 178, member A##BC015131|FAM178A|55719|family with sequence similarity 178, member A##BC047715|FAM178A|55719|family with sequence similarity 178, member A##BC030565|FAM178A|55719|family with sequence similarity 178, member A##BC064526|FAM178A|55719|family with sequence similarity 178, member A##BC020915|FAM178A|55719|family with sequence similarity 178, member A##BC073832|FAM178A|55719|family with sequence similarity 178, member A##AL832383|FAM178A|55719|family with sequence similarity 178, member A##AF460991|FAM178A|55719|family with sequence similarity 178, member A##AF460992|FAM178A|55719|family with sequence similarity 178, member A##NM_001136123|FAM178A|55719|family with sequence similarity 178, member A##NM_001243770|FAM178A|55719|family with sequence similarity 178, member A##NM_018121|FAM178A|55719|family with sequence similarity 178, member A##L25597|PAX2|5076|paired box 2##M89470|PAX2|5076|paired box 2##NM_000278|PAX2|5076|paired box 2##NM_003987|PAX2|5076|paired box 2##NM_003988|PAX2|5076|paired box 2##NM_003989|PAX2|5076|paired box 2##NM_003990|PAX2|5076|paired box 2##BC051030|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G##AK297431|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G##NM_001203244|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G##NM_017893|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G##AF086122|MRPL43|84545|mitochondrial ribosomal protein L43##BC031287|MRPL43|84545|mitochondrial ribosomal protein L43	0.916723	CTCF.p2:-2:0.917
chr14	69330052	69330185	reg1018681.p1	7.384	+	NM_001244701 AB528867	-67134	-	NM_001244698 NM_004926	-69488	-	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	-70398	-	TSC_hg19_v1_chr14_-_69354901 BX641076	24821	-	BX248020 AK299362 TSC_hg19_v1_chr14_-_69444987	114868	-	BT007207 AB590251 DQ890778 DQ895768 EU716325 FJ410030 TSC_hg19_v1_chr14_-_69445830 M95178 BC015766	115712	-	NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BX641076|ACTN1|87|actinin, alpha 1##BX248020|ACTN1|87|actinin, alpha 1##AK299362|ACTN1|87|actinin, alpha 1##BT007207|ACTN1|87|actinin, alpha 1##DQ890778|ACTN1|87|actinin, alpha 1##DQ895768|ACTN1|87|actinin, alpha 1##EU716325|ACTN1|87|actinin, alpha 1##FJ410030|ACTN1|87|actinin, alpha 1##M95178|ACTN1|87|actinin, alpha 1##BC015766|ACTN1|87|actinin, alpha 1	0.996944	CTCF.p2:5:0.997
chr14	74225132	74225234	reg1017545.p1	7.384	+	CR457112 BC039577 AK290980 TSC_hg19_v1_chr14_-_74181085 AF320308 BC007712 NM_006029	-44422	-	NM_001201366 NM_031427 AF542071 BC005343 AL833654 AK315392	-113530	+	DQ082756 NM_001037162	-141636	+	BC015668 TSC_hg19_v1_chr14_-_74226640	1455	-	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	1782	-	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	28736	-	CR457112|PNMA1|9240|paraneoplastic antigen MA1##BC039577|PNMA1|9240|paraneoplastic antigen MA1##AK290980|PNMA1|9240|paraneoplastic antigen MA1##AF320308|PNMA1|9240|paraneoplastic antigen MA1##BC007712|PNMA1|9240|paraneoplastic antigen MA1##NM_006029|PNMA1|9240|paraneoplastic antigen MA1##NM_001201366|DNAL1|83544|dynein, axonemal, light chain 1##NM_031427|DNAL1|83544|dynein, axonemal, light chain 1##AF542071|DNAL1|83544|dynein, axonemal, light chain 1##BC005343|DNAL1|83544|dynein, axonemal, light chain 1##AL833654|DNAL1|83544|dynein, axonemal, light chain 1##AK315392|DNAL1|83544|dynein, axonemal, light chain 1##DQ082756|ACOT6|641372|acyl-CoA thioesterase 6##NM_001037162|ACOT6|641372|acyl-CoA thioesterase 6##BC015668|C14orf43|91748|chromosome 14 open reading frame 43##AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43	0.584284	CTCF.p2:9:0.584
chr6	73995563	73995652	reg1016023.p1	7.384	+	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	-22634	+	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	-22741	-	BC004267 NM_001126063	-60433	-	AK090984 BC035766 CR936715 NM_001251874	24279	-	BC137549 BC137558 NM_001025290	68391	-	AB211062 NM_001017361 BC132844 BC137160 HQ258760	76816	+	BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1##BC004267|KHDC1L|100129128|KH homology domain containing 1-like##NM_001126063|KHDC1L|100129128|KH homology domain containing 1-like##AK090984|C6orf147|387097|chromosome 6 open reading frame 147##NM_001251874|KHDC1|80759|KH homology domain containing 1##BC137549|DPPA5|340168|developmental pluripotency associated 5##BC137558|DPPA5|340168|developmental pluripotency associated 5##NM_001025290|DPPA5|340168|developmental pluripotency associated 5##AB211062|C6orf221|154288|chromosome 6 open reading frame 221##NM_001017361|C6orf221|154288|chromosome 6 open reading frame 221##BC132844|C6orf221|154288|chromosome 6 open reading frame 221##BC137160|C6orf221|154288|chromosome 6 open reading frame 221##HQ258760|C6orf221|154288|chromosome 6 open reading frame 221	0.995743	CTCF.p2:-1:0.996
chr7	3937207	3937319	reg1018803.p2	7.384	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	-596264	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	-853801	-	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-1053455	-	TSC_hg19_v1_chr7_+_4721925 NM_001037165	784575	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	784988	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	877998	+	AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_001037165|FOXK1|221937|forkhead box K1##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415	0.915137	CTCF.p2:-7:0.915
chr1	120601509	120601620	reg1019172.p1	7.383	+	U77493 TSC_hg19_v1_chr1_-_120484245	-117325	-	BC028372 AY358734 AK292483 NM_021794	-162433	-	NM_001047980	-213786	-	AF308601 TSC_hg19_v1_chr1_-_120612027 AF315356	10465	-	TSC_hg19_v1_chr1_-_120612211 AK307843	10642	-	TSC_hg19_v1_chr1_-_120612272 BC071562	10702	-	U77493|NOTCH2|4853|notch 2##BC028372|ADAM30|11085|ADAM metallopeptidase domain 30##AY358734|ADAM30|11085|ADAM metallopeptidase domain 30##AK292483|ADAM30|11085|ADAM metallopeptidase domain 30##NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30##NM_001047980|NBPF7|343505|neuroblastoma breakpoint family, member 7##AF308601|NOTCH2|4853|notch 2##AF315356|NOTCH2|4853|notch 2##AK307843|NOTCH2|4853|notch 2##BC071562|NOTCH2|4853|notch 2	0.187352	
chr1	155196509	155196630	reg1019704.p1	7.383	+	TSC_hg19_v1_chr1_+_155179028 BC035616 AX775989	-17543	+	AK311031 TSC_hg19_v1_chr1_-_155178970	-17592	-	NM_002455 NM_198883 AK313863 BC001906	-18031	+	BC030240 BC000349 AK297653 TSC_hg19_v1_chr1_-_155197234	644	-	K02920 AB527624 BC003356 D13286 AK301374 M19285 M22212 TSC_hg19_v1_chr1_-_155211041 AK300186 AK302000	14397	-	TSC_hg19_v1_chr1_-_155211049 AK298900 AK301879 NM_001171812 NM_000157	14489	-	BC035616|MTX1|4580|metaxin 1##AX775989|MTX1|4580|metaxin 1##AK311031|THBS3|7059|thrombospondin 3##NM_002455|MTX1|4580|metaxin 1##NM_198883|MTX1|4580|metaxin 1##AK313863|MTX1|4580|metaxin 1##BC001906|MTX1|4580|metaxin 1##BC030240|GBAP1|2630|glucosidase, beta, acid pseudogene 1##BC000349|GBAP1|2630|glucosidase, beta, acid pseudogene 1##AK297653|GBAP1|2630|glucosidase, beta, acid pseudogene 1##K02920|GBA|2629|glucosidase, beta, acid##BC003356|GBA|2629|glucosidase, beta, acid##D13286|GBA|2629|glucosidase, beta, acid##AK301374|GBA|2629|glucosidase, beta, acid##M19285|GBA|2629|glucosidase, beta, acid##AK300186|GBA|2629|glucosidase, beta, acid##AK302000|GBA|2629|glucosidase, beta, acid##AK298900|GBA|2629|glucosidase, beta, acid##AK301879|GBA|2629|glucosidase, beta, acid##NM_001171812|GBA|2629|glucosidase, beta, acid##NM_000157|GBA|2629|glucosidase, beta, acid	0.032084	
chr12	93221750	93221864	reg1018263.p1	7.383	+	NM_001004330 AK128530	-91520	+	NM_001037671 NM_001178097	-125189	+	AJ845168 NM_001025232	-399884	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	101131	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	101236	-	TSC_hg19_v1_chr12_-_93323097 NM_003566	101291	-	NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##NM_003566|EEA1|8411|early endosome antigen 1	0.016371	
chr3	24722101	24722228	reg1019182.p2	7.383	+	AY286470 TSC_hg19_v1_chr3_-_24536493	-185687	-	GQ456948 GQ456949 GQ869479 GQ919288 AY286469 AY286468 AY286465 AY286471 TSC_hg19_v1_chr3_-_24536294 AY286467 AY286466 AK096628 M26747 NM_000461 NM_001128176 NM_001128177 NM_001252634 X04707	-185920	-	TSC_hg19_v1_chr3_+_23987516 AK301925 NM_001145425	-734602	+	TSC_hg19_v1_chr3_+_25469751 AF157483 NM_016152	747595	+	BC030234 NM_000965 TSC_hg19_v1_chr3_+_25469854 X07282 Y00291	747703	+	TSC_hg19_v1_chr3_+_25470068 BC060794 AK292032 AB590663 CU687428 AB307688 HQ692864	747980	+	AY286470|THRB|7068|thyroid hormone receptor, beta##GQ456948|THRB|7068|thyroid hormone receptor, beta##GQ456949|THRB|7068|thyroid hormone receptor, beta##GQ869479|THRB|7068|thyroid hormone receptor, beta##GQ919288|THRB|7068|thyroid hormone receptor, beta##AY286469|THRB|7068|thyroid hormone receptor, beta##AY286468|THRB|7068|thyroid hormone receptor, beta##AY286465|THRB|7068|thyroid hormone receptor, beta##AY286471|THRB|7068|thyroid hormone receptor, beta##AY286467|THRB|7068|thyroid hormone receptor, beta##AY286466|THRB|7068|thyroid hormone receptor, beta##AK096628|THRB|7068|thyroid hormone receptor, beta##M26747|THRB|7068|thyroid hormone receptor, beta##NM_000461|THRB|7068|thyroid hormone receptor, beta##NM_001128176|THRB|7068|thyroid hormone receptor, beta##NM_001128177|THRB|7068|thyroid hormone receptor, beta##NM_001252634|THRB|7068|thyroid hormone receptor, beta##X04707|THRB|7068|thyroid hormone receptor, beta##AK301925|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001145425|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##AF157483|RARB|5915|retinoic acid receptor, beta##NM_016152|RARB|5915|retinoic acid receptor, beta##BC030234|RARB|5915|retinoic acid receptor, beta##NM_000965|RARB|5915|retinoic acid receptor, beta##X07282|RARB|5915|retinoic acid receptor, beta##Y00291|RARB|5915|retinoic acid receptor, beta##BC060794|RARB|5915|retinoic acid receptor, beta##AK292032|RARB|5915|retinoic acid receptor, beta##AB307688|RARB|5915|retinoic acid receptor, beta##HQ692864|RARB|5915|retinoic acid receptor, beta	0.999212	CTCF.p2:3:0.999
chr14	105748300	105748411	reg1020719.p1	7.382	+	AK096471 NM_001242789	-32615	-	TSC_hg19_v1_chr14_+_105714895 BC042525	-33406	+	TSC_hg19_v1_chr14_+_105714874 NM_033271	-33490	+	AJ297408 AB527272 CU677703 TSC_hg19_v1_chr14_-_105767003 U75276	18610	-	TSC_hg19_v1_chr14_-_105767067 BC086856	18707	-	TSC_hg19_v1_chr14_+_105767110 BC131591 NM_001243127	18781	+	AK096471|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_001242789|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##BC042525|BTBD6|90135|BTB (POZ) domain containing 6##NM_033271|BTBD6|90135|BTB (POZ) domain containing 6##AJ297408|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##U75276|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##BC086856|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##BC131591|PACS2|23241|phosphofurin acidic cluster sorting protein 2##NM_001243127|PACS2|23241|phosphofurin acidic cluster sorting protein 2	0.182128	
chr2	235392636	235392766	reg1019398.p2	7.382	+	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-433314	+	AY090109 NM_024080 BC126342 BC143819	-566656	+	TSC_hg19_v1_chr2_-_234777033 AK301707	-615664	-	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	13018	-	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	467957	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	1010102	+	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##AK301707|MSL3P1|151507|male-specific lethal 3 homolog (Drosophila) pseudogene 1##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.0	
chr17	28804245	28804396	reg1020840.p1	7.381	+	AK316409 NM_001199775 AK302878	-96805	+	TSC_hg19_v1_chr17_+_28705984 U65090 AB385118	-98331	+	TSC_hg19_v1_chr17_+_28705963 D85390 BC045624	-98354	+	TSC_hg19_v1_chr17_+_28804434 AK000606 AK291381 NM_001007024 NM_001007025 NM_004871 AK298714 AF047438 BC012620 AF073926 BC040471	113	+	BC096718 BC098126 BC098273 NM_015594	82263	+	TSC_hg19_v1_chr17_+_29058664 BC047718	254368	+	AK316409|CPD|1362|carboxypeptidase D##NM_001199775|CPD|1362|carboxypeptidase D##AK302878|CPD|1362|carboxypeptidase D##U65090|CPD|1362|carboxypeptidase D##D85390|CPD|1362|carboxypeptidase D##BC045624|CPD|1362|carboxypeptidase D##AK000606|GOSR1|9527|golgi SNAP receptor complex member 1##AK291381|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1##NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1##AK298714|GOSR1|9527|golgi SNAP receptor complex member 1##AF047438|GOSR1|9527|golgi SNAP receptor complex member 1##BC012620|GOSR1|9527|golgi SNAP receptor complex member 1##AF073926|GOSR1|9527|golgi SNAP receptor complex member 1##BC040471|GOSR1|9527|golgi SNAP receptor complex member 1##BC096718|TBC1D29|26083|TBC1 domain family, member 29##BC098126|TBC1D29|26083|TBC1 domain family, member 29##BC098273|TBC1D29|26083|TBC1 domain family, member 29##NM_015594|TBC1D29|26083|TBC1 domain family, member 29##BC047718|SUZ12P|440423|suppressor of zeste 12 homolog pseudogene	0.995308	CTCF.p2:4:0.995
chr3	56374667	56374784	reg1019503.p2	7.381	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-853107	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-853393	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-859317	-	BC111550 BC112391 AB002376 NM_015576	127652	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	216477	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	216521	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.999024	CTCF.p2:-15:0.999
chr13	53436633	53436768	reg1018496.p2	7.380	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	-13925	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-122738	-	AB006000 CR541910 TSC_hg19_v1_chr13_-_53313891	-122836	-	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	166212	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	4278416	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	4284986	+	AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AB006000|LECT1|11061|leukocyte cell derived chemotaxin 1##CR541910|LECT1|11061|leukocyte cell derived chemotaxin 1##AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	0.990115	CTCF.p2:-5:0.990
chr4	77679563	77679696	reg1018389.p1	7.379	+	TSC_hg19_v1_chr4_+_77610738 AK304103	-68878	+	AK027744 TSC_hg19_v1_chr4_+_77610613	-69018	+	AB055660 NM_020859	-323377	+	NM_001029870 BC137241 BC137255	139410	-	TSC_hg19_v1_chr4_+_77870905 BC008083 NM_018243	191256	+	TSC_hg19_v1_chr4_+_77870908 BC064934	191283	+	AK304103|SHROOM3|57619|shroom family member 3##AK027744|SHROOM3|57619|shroom family member 3##AB055660|SHROOM3|57619|shroom family member 3##NM_020859|SHROOM3|57619|shroom family member 3##NM_001029870|ANKRD56|345079|ankyrin repeat domain 56##BC137241|ANKRD56|345079|ankyrin repeat domain 56##BC137255|ANKRD56|345079|ankyrin repeat domain 56##BC008083|SEPT11|55752|septin 11##NM_018243|SEPT11|55752|septin 11##BC064934|SEPT11|55752|septin 11	0.439566	CTCF.p2:11:0.440
chr5	10857225	10857387	reg1019412.p1	7.379	+	TSC_hg19_v1_chr5_-_10761361 NM_004394	-95907	-	TSC_hg19_v1_chr5_-_10761341 BC002726	-95964	-	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	-96047	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	1046730	-	TSC_hg19_v1_chr5_-_11904184 AK296232	1046878	-	AX800026 AY045575 NM_001369	3087282	-	NM_004394|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5	0.997259	CTCF.p2:21:0.997
chr8	121465107	121465245	reg1018423.p1	7.379	+	TSC_hg19_v1_chr8_+_121457658 AK022122 AK300762 BC013136 NM_022045 EU176294 EU176618	-7500	+	BC021744 NM_014078	-7541	-	TSC_hg19_v1_chr8_-_121457391 AK311924	-7783	-	TSC_hg19_v1_chr8_+_121823539 AK302130	358365	+	TSC_hg19_v1_chr8_-_121823718 AF028828	358585	-	TSC_hg19_v1_chr8_-_121824090 AB590740	358887	-	AK022122|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##AK300762|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##BC013136|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##NM_022045|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##EU176294|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##EU176618|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##BC021744|MRPL13|28998|mitochondrial ribosomal protein L13##NM_014078|MRPL13|28998|mitochondrial ribosomal protein L13##AK311924|MRPL13|28998|mitochondrial ribosomal protein L13##AF028828|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)	0.748467	CTCF.p2:-34:0.748
chr6	96990722	96990836	reg1018185.p1	7.378	+	TSC_hg19_v1_chr6_+_96969734 AB018319 CU690338	-21040	+	TSC_hg19_v1_chr6_+_96969716 NM_015323 BC015377 AK307651 BC036379 BC028608	-21080	+	NM_006581 AK314966 TSC_hg19_v1_chr6_+_96463867 BC001879 BC036101 AB023021	-526912	+	NM_001170807 NM_020482 AK058175 BC029490 BC021723 AK223539	19690	+	TSC_hg19_v1_chr6_-_97285392 AB030566 AK313535 AB209347 AK289839 NM_001143957 NM_030784	294452	-	HQ257923 TSC_hg19_v1_chr6_-_97345742 AF060508 AK311850 BC039464	354931	-	AB018319|UFL1|23376|UFM1-specific ligase 1##NM_015323|UFL1|23376|UFM1-specific ligase 1##BC015377|UFL1|23376|UFM1-specific ligase 1##AK307651|UFL1|23376|UFM1-specific ligase 1##BC036379|UFL1|23376|UFM1-specific ligase 1##BC028608|UFL1|23376|UFM1-specific ligase 1##NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##NM_001170807|FHL5|9457|four and a half LIM domains 5##NM_020482|FHL5|9457|four and a half LIM domains 5##AK058175|FHL5|9457|four and a half LIM domains 5##BC029490|FHL5|9457|four and a half LIM domains 5##BC021723|FHL5|9457|four and a half LIM domains 5##AK223539|FHL5|9457|four and a half LIM domains 5##AB030566|GPR63|81491|G protein-coupled receptor 63##AK313535|GPR63|81491|G protein-coupled receptor 63##AB209347|GPR63|81491|G protein-coupled receptor 63##AK289839|GPR63|81491|G protein-coupled receptor 63##NM_001143957|GPR63|81491|G protein-coupled receptor 63##NM_030784|GPR63|81491|G protein-coupled receptor 63##HQ257923|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF060508|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK311850|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC039464|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	0.999426	CTCF.p2:-9:0.999
chr1	155293192	155293314	reg1015866.p2	7.377	+	NM_001105203 NM_001105204 TSC_hg19_v1_chr1_+_155290711 AK125378 BC025680	-2553	+	TSC_hg19_v1_chr1_+_155279520 BC010004 DQ893471 DQ895943	-13706	+	AK022841 TSC_hg19_v1_chr1_+_155278730 AK291084 D14697	-14513	+	BC052277 NM_001105205	474	+	TSC_hg19_v1_chr1_-_155293939 BC080538 NM_001039517 BC062571	689	-	AK298730 NM_014328 AK093777 AX748300 BC001045 AK307736 TSC_hg19_v1_chr1_+_155294297 AK074485 AB026894 AK074982 BC028055 BC004293 BX640612	1039	+	NM_001105203|RUSC1|23623|RUN and SH3 domain containing 1##NM_001105204|RUSC1|23623|RUN and SH3 domain containing 1##AK125378|RUSC1|23623|RUN and SH3 domain containing 1##BC025680|RUSC1|23623|RUN and SH3 domain containing 1##BC010004|FDPS|2224|farnesyl diphosphate synthase##DQ893471|FDPS|2224|farnesyl diphosphate synthase##DQ895943|FDPS|2224|farnesyl diphosphate synthase##AK022841|FDPS|2224|farnesyl diphosphate synthase##AK291084|FDPS|2224|farnesyl diphosphate synthase##D14697|FDPS|2224|farnesyl diphosphate synthase##BC052277|RUSC1|23623|RUN and SH3 domain containing 1##NM_001105205|RUSC1|23623|RUN and SH3 domain containing 1##BC080538|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)##NM_001039517|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)##BC062571|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)##AK298730|RUSC1|23623|RUN and SH3 domain containing 1##NM_014328|RUSC1|23623|RUN and SH3 domain containing 1##AK093777|RUSC1|23623|RUN and SH3 domain containing 1##BC001045|RUSC1|23623|RUN and SH3 domain containing 1##AK307736|RUSC1|23623|RUN and SH3 domain containing 1##AK074485|RUSC1|23623|RUN and SH3 domain containing 1##AB026894|RUSC1|23623|RUN and SH3 domain containing 1##AK074982|RUSC1|23623|RUN and SH3 domain containing 1##BC028055|RUSC1|23623|RUN and SH3 domain containing 1##BC004293|RUSC1|23623|RUN and SH3 domain containing 1##BX640612|RUSC1|23623|RUN and SH3 domain containing 1	0.900275	CTCF.p2:0:0.900
chr8	145955592	145955687	reg1017577.p1	7.377	+	TSC_hg19_v1_chr8_-_145911232 AK296353	-44412	-	AB051475 NM_025251	-116752	-	AK092501 AX747574 TSC_hg19_v1_chr8_-_145770830	-184883	-	TSC_hg19_v1_chr8_-_145980846 AK000435	25215	-	TSC_hg19_v1_chr8_-_145980977 NM_138367	25335	-	TSC_hg19_v1_chr8_-_146012703 BC004480 AL833814 AK096508 NM_030580	57061	-	AK296353|ARHGAP39|80728|Rho GTPase activating protein 39##AB051475|ARHGAP39|80728|Rho GTPase activating protein 39##NM_025251|ARHGAP39|80728|Rho GTPase activating protein 39##AK092501|ARHGAP39|80728|Rho GTPase activating protein 39##AK000435|ZNF251|90987|zinc finger protein 251##NM_138367|ZNF251|90987|zinc finger protein 251##BC004480|ZNF34|80778|zinc finger protein 34##AL833814|ZNF34|80778|zinc finger protein 34##AK096508|ZNF34|80778|zinc finger protein 34##NM_030580|ZNF34|80778|zinc finger protein 34	0.02073	
chr12	76552611	76552766	reg1018252.p1	7.376	+	NM_004537 NM_139207	-73951	-	TSC_hg19_v1_chr12_-_76478466 BC002387 AL162068 AK122670 AK298936 D28430 AK297500 AK304787	-74200	-	TSC_hg19_v1_chr12_-_76478393 AK295147 M86667	-74310	-	TSC_hg19_v1_chr12_-_76742196 AK304178 BC026355 NM_024685	189506	-	AB040884 TSC_hg19_v1_chr12_-_76953317 AK289997 CR749542	400603	-	BC111728 TSC_hg19_v1_chr12_-_76953484	400795	-	NM_004537|NAP1L1|4673|nucleosome assembly protein 1-like 1##NM_139207|NAP1L1|4673|nucleosome assembly protein 1-like 1##BC002387|NAP1L1|4673|nucleosome assembly protein 1-like 1##AL162068|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK122670|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK298936|NAP1L1|4673|nucleosome assembly protein 1-like 1##D28430|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK297500|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK304787|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK295147|NAP1L1|4673|nucleosome assembly protein 1-like 1##M86667|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK304178|BBS10|79738|Bardet-Biedl syndrome 10##BC026355|BBS10|79738|Bardet-Biedl syndrome 10##NM_024685|BBS10|79738|Bardet-Biedl syndrome 10##AB040884|OSBPL8|114882|oxysterol binding protein-like 8##AK289997|OSBPL8|114882|oxysterol binding protein-like 8##CR749542|OSBPL8|114882|oxysterol binding protein-like 8##BC111728|OSBPL8|114882|oxysterol binding protein-like 8	0.0	
chr14	23768998	23769121	reg1018981.p1	7.376	+	NM_020834 TSC_hg19_v1_chr14_-_23755308	-13734	-	AB037864 AF463523 TSC_hg19_v1_chr14_-_23755306 AK296927	-13790	-	TSC_hg19_v1_chr14_-_23652870 AL365342 NM_012244 Y18483 AL365346 AK223610	-116187	-	NM_001199864 NM_004050 AK289519 TSC_hg19_v1_chr14_+_23776072 BC104789 BC113522 D87461 BC011637 NM_001199839	6985	+	NM_004643	20337	+	TSC_hg19_v1_chr14_+_23790671 BX247976 BC010939	21615	+	NM_020834|HOMEZ|57594|homeobox and leucine zipper encoding##AB037864|HOMEZ|57594|homeobox and leucine zipper encoding##AF463523|HOMEZ|57594|homeobox and leucine zipper encoding##AK296927|HOMEZ|57594|homeobox and leucine zipper encoding##AL365342|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##NM_012244|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##Y18483|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AL365346|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##AK223610|SLC7A8|23428|solute carrier family 7 (amino acid transporter light chain, L system), member 8##NM_001199864|BCL2L2-PABPN1|100529063|BCL2L2-PABPN1 readthrough##NM_004050|BCL2L2|599|BCL2-like 2##AK289519|BCL2L2|599|BCL2-like 2##BC104789|BCL2L2|599|BCL2-like 2##BC113522|BCL2L2|599|BCL2-like 2##D87461|BCL2L2|599|BCL2-like 2##BC011637|BCL2L2-PABPN1|100529063|BCL2L2-PABPN1 readthrough##NM_001199839|BCL2L2|599|BCL2-like 2##NM_004643|PABPN1|8106|poly(A) binding protein, nuclear 1##BX247976|PABPN1|8106|poly(A) binding protein, nuclear 1##BC010939|PABPN1|8106|poly(A) binding protein, nuclear 1	0.985894	CTCF.p2:28:0.986
chr4	129486867	129487008	reg1021417.p1	7.376	+	AK131272 NM_006320	-276954	-	TSC_hg19_v1_chr4_-_129208969 BC092478	-277946	-	AK091741 AX747155 TSC_hg19_v1_chr4_-_129208964 BC016692	-277973	-	TSC_hg19_v1_chr4_+_129730875 NM_024900 NM_199320 AK027620 AF520952 AK304815 AK127326	243933	+	TSC_hg19_v1_chr4_+_129732427 BC032376	245516	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	527653	-	AK131272|PGRMC2|10424|progesterone receptor membrane component 2##NM_006320|PGRMC2|10424|progesterone receptor membrane component 2##BC092478|PGRMC2|10424|progesterone receptor membrane component 2##AK091741|PGRMC2|10424|progesterone receptor membrane component 2##BC016692|PGRMC2|10424|progesterone receptor membrane component 2##NM_024900|PHF17|79960|PHD finger protein 17##NM_199320|PHF17|79960|PHD finger protein 17##AK027620|PHF17|79960|PHD finger protein 17##AF520952|PHF17|79960|PHD finger protein 17##AK304815|PHF17|79960|PHD finger protein 17##AK127326|PHF17|79960|PHD finger protein 17##BC032376|PHF17|79960|PHD finger protein 17##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1	0.983784	CTCF.p2:-4:0.984
chr12	122840832	122840923	reg1016581.p1	7.375	+	AF045652 AF045653 AY563000 TSC_hg19_v1_chr12_-_122839059	-1840	-	TSC_hg19_v1_chr12_-_122751044 NM_022916	-89822	-	AB527663 EU176253 TSC_hg19_v1_chr12_-_122750984 AL833244 BC016617 AF439857 AK026840 AK315545	-89879	-	X64838 TSC_hg19_v1_chr12_-_122907155 M97501 NM_001247997 NM_002956 NM_198240	66360	-	TSC_hg19_v1_chr12_-_122985404 BC065918	144550	-	TSC_hg19_v1_chr12_-_122985537 AK027702 AK074638 NM_017612	144641	-	AF045652|CLIP1|6249|CAP-GLY domain containing linker protein 1##AF045653|CLIP1|6249|CAP-GLY domain containing linker protein 1##AY563000|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_022916|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##EU176253|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##BC016617|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##AF439857|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##AK026840|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##AK315545|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##X64838|CLIP1|6249|CAP-GLY domain containing linker protein 1##M97501|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_001247997|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_002956|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_198240|CLIP1|6249|CAP-GLY domain containing linker protein 1##BC065918|ZCCHC8|55596|zinc finger, CCHC domain containing 8##AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8##AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8##NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8	0.882833	CTCF.p2:0:0.883
chr10	11767167	11767288	reg1000201.p1	7.374	+	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	-113591	-	NM_001080491	-192954	-	TSC_hg19_v1_chr10_+_11207490 AK295511	-559735	+	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	17171	+	TSC_hg19_v1_chr10_+_11865354 BC017269 BC048800 NM_153256	98131	+	AK056703 TSC_hg19_v1_chr10_-_11936707	169475	-	AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK295511|CELF2|10659|CUGBP, Elav-like family member 2##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC017269|C10orf47|254427|chromosome 10 open reading frame 47##BC048800|C10orf47|254427|chromosome 10 open reading frame 47##NM_153256|C10orf47|254427|chromosome 10 open reading frame 47##AK056703|LOC219731|219731|uncharacterized LOC219731	0.0	
chr10	91053338	91053490	reg1019090.p1	7.374	+	TSC_hg19_v1_chr10_-_91011616 BC012287 X76488 NM_000235 NM_001127605	-41792	-	AK130882 TSC_hg19_v1_chr10_-_91011565	-41847	-	U08464 Z31690 TSC_hg19_v1_chr10_-_91011533 AK222760 AK290241 AK297079 AK314665 M74775	-41884	-	NM_001547 AK312831 BC005987 BC032839 TSC_hg19_v1_chr10_+_91061802 AK300431	8341	+	NM_001549 AK290427 AF083470 AK312675 U52513 TSC_hg19_v1_chr10_+_91087771	34272	+	NM_001031683 AK297137 AF026939 BC001383 BC004977	38869	+	BC012287|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##X76488|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_000235|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_001127605|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK130882|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##U08464|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##Z31690|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK222760|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK290241|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK297079|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##AK314665|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##M74775|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_001547|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##AK312831|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##BC005987|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##BC032839|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##AK300431|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##NM_001549|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK290427|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AF083470|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK312675|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##U52513|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3	0.910479	CTCF.p2:-26:0.910
chr1	101602509	101602643	reg1018643.p1	7.374	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-111143	+	BC003660 TSC_hg19_v1_chr1_-_101491341 AK125485 BC053857 AF132964 AF157319 AF248965 AK298181 AK225469 AK225707 AK225951 AK289351 NM_001077394 NM_001077395 NM_015958 AF161492	-111237	-	TSC_hg19_v1_chr1_+_101361700 AF233345 AB463270 AF529197 AM392927 AY094606	-240823	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	99805	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	99994	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	859911	-	AK125485|DPH5|51611|DPH5 homolog (S. cerevisiae)##BC053857|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF132964|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF157319|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF248965|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK298181|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225469|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225707|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225951|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK289351|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_001077394|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_001077395|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_015958|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF161492|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF233345|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AF529197|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AM392927|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AY094606|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3	0.0	
chr13	99118995	99119119	reg1019743.p1	7.374	+	TSC_hg19_v1_chr13_+_99058147 AF339817	-60851	+	AB464689 EU446571 AF539427 BC025388 BC017585 NM_178861	-289552	-	TSC_hg19_v1_chr13_+_98795717 AB008430 BC065020	-323339	+	AF083420 NM_003576	55238	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	109997	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	110065	-	EU446571|RNF113B|140432|ring finger protein 113B##AF539427|RNF113B|140432|ring finger protein 113B##BC025388|RNF113B|140432|ring finger protein 113B##BC017585|RNF113B|140432|ring finger protein 113B##NM_178861|RNF113B|140432|ring finger protein 113B##AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##AF083420|STK24|8428|serine/threonine kinase 24##NM_003576|STK24|8428|serine/threonine kinase 24##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24	0.088835	
chr22	51130068	51130204	reg1019086.p1	7.373	+	AB569469 NM_001080420	-17067	+	TSC_hg19_v1_chr22_-_51066581 AK092752 X52151 BX648618 BC014210 AK098659 AB448736 AK301098 AK315011 NM_000487 NM_001085425 NM_001085426 NM_001085427 NM_001085428	-63602	-	AF218778 NM_016431	-88575	+	AK310316 Y00970 NM_001097 CR456366 AB587466 CU012933 CU013221	46507	+	BC075856 TSC_hg19_v1_chr22_-_51222065 AF095352 BC024281 BC040495 BC014879 BC020495 AK308268 NM_001003789 NM_001130919 NM_001130920 NM_001130921 NM_001130922 NM_001130923 NM_007081 AK313442	91927	-	TSC_hg19_v1_chr22_+_51222212 AK293095 AL365511 BC019348 BC065556	92104	+	AB569469|SHANK3|85358|SH3 and multiple ankyrin repeat domains 3##NM_001080420|SHANK3|85358|SH3 and multiple ankyrin repeat domains 3##AK092752|ARSA|410|arylsulfatase A##X52151|ARSA|410|arylsulfatase A##BX648618|ARSA|410|arylsulfatase A##BC014210|ARSA|410|arylsulfatase A##AK098659|ARSA|410|arylsulfatase A##AB448736|ARSA|410|arylsulfatase A##AK301098|ARSA|410|arylsulfatase A##AK315011|ARSA|410|arylsulfatase A##NM_000487|ARSA|410|arylsulfatase A##NM_001085425|ARSA|410|arylsulfatase A##NM_001085426|ARSA|410|arylsulfatase A##NM_001085427|ARSA|410|arylsulfatase A##NM_001085428|ARSA|410|arylsulfatase A##AF218778|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##NM_016431|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AK310316|ACR|49|acrosin##Y00970|ACR|49|acrosin##NM_001097|ACR|49|acrosin##CR456366|ACR|49|acrosin##CU012933|ACR|49|acrosin##CU013221|ACR|49|acrosin##BC075856|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##AF095352|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##BC024281|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##BC040495|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##BC014879|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##BC020495|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##AK308268|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_001003789|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_001130919|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_001130920|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_001130921|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_001130922|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_001130923|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##NM_007081|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##AK313442|RABL2B|11158|RAB, member of RAS oncogene family-like 2B##AK293095|RPL23AP82|284942|ribosomal protein L23a pseudogene 82##AL365511|RPL23AP82|284942|ribosomal protein L23a pseudogene 82##BC019348|RPL23AP82|284942|ribosomal protein L23a pseudogene 82##BC065556|RPL23AP82|284942|ribosomal protein L23a pseudogene 82	0.994655	CTCF.p2:3:0.995
chr6	163591440	163591561	reg1018575.p2	7.373	+	AF546872 NM_001080379 BC030642	-442484	+	TSC_hg19_v1_chr6_-_163148808 NM_004562 NM_013987 NM_013988	-442684	-	TSC_hg19_v1_chr6_-_163148799 AB009973	-442702	-	TSC_hg19_v1_chr6_+_163835675 AB067798 AB067799 AB067800 AB067801 NM_006775 NM_206853 NM_206854 NM_206855	244172	+	TSC_hg19_v1_chr6_+_163835795 AF272349	244290	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	244732	+	AF546872|PACRG|135138|PARK2 co-regulated##NM_001080379|PACRG|135138|PARK2 co-regulated##BC030642|PACRG|135138|PARK2 co-regulated##NM_004562|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##NM_013987|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##NM_013988|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB009973|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB067798|QKI|9444|QKI, KH domain containing, RNA binding##AB067799|QKI|9444|QKI, KH domain containing, RNA binding##AB067800|QKI|9444|QKI, KH domain containing, RNA binding##AB067801|QKI|9444|QKI, KH domain containing, RNA binding##NM_006775|QKI|9444|QKI, KH domain containing, RNA binding##NM_206853|QKI|9444|QKI, KH domain containing, RNA binding##NM_206854|QKI|9444|QKI, KH domain containing, RNA binding##NM_206855|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding	0.863767	CTCF.p2:-7:0.850
chr9	116499852	116499989	reg1019198.p2	7.373	+	TSC_hg19_v1_chr9_+_116356408 BC018072 BC019039 CU676160	-143439	+	AF490838 NM_144489 AK054584	-143710	+	U27655 AK125094 TSC_hg19_v1_chr9_+_116343207	-156732	+	TSC_hg19_v1_chr9_+_116638585 BC036039 NM_133374 BC136287 BC143826 AK126896 BC053892	138679	+	TSC_hg19_v1_chr9_-_116840540 CU692002 AB463406 X04494	340580	-	TSC_hg19_v1_chr9_-_116840546 AY544123	340627	-	BC018072|RGS3|5998|regulator of G-protein signaling 3##BC019039|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3##U27655|RGS3|5998|regulator of G-protein signaling 3##AK125094|RGS3|5998|regulator of G-protein signaling 3##BC036039|ZNF618|114991|zinc finger protein 618##NM_133374|ZNF618|114991|zinc finger protein 618##BC136287|ZNF618|114991|zinc finger protein 618##BC143826|ZNF618|114991|zinc finger protein 618##AK126896|ZNF618|114991|zinc finger protein 618##BC053892|ZNF618|114991|zinc finger protein 618##X04494|AMBP|259|alpha-1-microglobulin/bikunin precursor##AY544123|AMBP|259|alpha-1-microglobulin/bikunin precursor	0.939773	CTCF.p2:-29:0.940
chr1	149192800	149192947	reg1019636.p1	7.372	+	NM_001164261 NM_001164262	-386859	+	NM_001102663 AK290302 AY894562 AY894566	-453372	+	NM_001144032	-548863	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	206323	-	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	360150	+	X14355 AK311303 NM_000566 X14356 AK291451 BC032634 AB527585 BC152383 CU689454 DQ890842 DQ893997 L03418	561399	+	NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001144032|PPIAL4E|730262|peptidylprolyl isomerase A (cyclophilin A)-like 4E##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##X14355|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##NM_000566|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##X14356|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK291451|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC032634|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC152383|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ890842|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ893997|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##L03418|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)	0.958603	CTCF.p2:-7:0.959
chr12	32908150	32908283	reg1007319.p1	7.371	+	TSC_hg19_v1_chr12_+_32832277 AF061795 AF151685 AB384831 CU692924 DQ891544 DQ894732 BC000136	-75893	+	TSC_hg19_v1_chr12_+_32832234 AK299926 AF000430 AK291094 AK293290 AK294533 AK298568 BC107763 AB209070 AB006965 BC024590	-75979	+	TSC_hg19_v1_chr12_+_32832187 AK302565 NM_005690 NM_012062 NM_012063 AK311606	-76059	+	AF132939 CU677373 DQ893063 DQ896315 BC015625 TSC_hg19_v1_chr12_-_32908835 AK024057 AK026619 AK130935 NM_001040436	625	-	EU520483 EU520484 EU520485 EU520486 AB590796 HQ258660 TSC_hg19_v1_chr12_-_33049733 X97675 BC094762 BC126199 BC143966 BC143967 BC070083 NM_001005242 NM_004572	141519	-	BC101024 BC101025 TSC_hg19_v1_chr12_-_33592705 AY198413 NM_198992	684450	-	AF061795|DNM1L|10059|dynamin 1-like##AF151685|DNM1L|10059|dynamin 1-like##DQ891544|DNM1L|10059|dynamin 1-like##DQ894732|DNM1L|10059|dynamin 1-like##AK299926|DNM1L|10059|dynamin 1-like##AF000430|DNM1L|10059|dynamin 1-like##AK291094|DNM1L|10059|dynamin 1-like##AK293290|DNM1L|10059|dynamin 1-like##AK294533|DNM1L|10059|dynamin 1-like##AK298568|DNM1L|10059|dynamin 1-like##BC107763|DNM1L|10059|dynamin 1-like##AB209070|DNM1L|10059|dynamin 1-like##AB006965|DNM1L|10059|dynamin 1-like##BC024590|DNM1L|10059|dynamin 1-like##AK302565|DNM1L|10059|dynamin 1-like##NM_005690|DNM1L|10059|dynamin 1-like##NM_012062|DNM1L|10059|dynamin 1-like##NM_012063|DNM1L|10059|dynamin 1-like##AK311606|DNM1L|10059|dynamin 1-like##AF132939|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##DQ893063|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##DQ896315|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##BC015625|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK024057|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK026619|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK130935|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##NM_001040436|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##EU520483|PKP2|5318|plakophilin 2##EU520484|PKP2|5318|plakophilin 2##EU520485|PKP2|5318|plakophilin 2##EU520486|PKP2|5318|plakophilin 2##HQ258660|PKP2|5318|plakophilin 2##X97675|PKP2|5318|plakophilin 2##BC094762|PKP2|5318|plakophilin 2##BC126199|PKP2|5318|plakophilin 2##BC143966|PKP2|5318|plakophilin 2##BC143967|PKP2|5318|plakophilin 2##BC070083|PKP2|5318|plakophilin 2##NM_001005242|PKP2|5318|plakophilin 2##NM_004572|PKP2|5318|plakophilin 2##BC101024|SYT10|341359|synaptotagmin X##BC101025|SYT10|341359|synaptotagmin X##AY198413|SYT10|341359|synaptotagmin X##NM_198992|SYT10|341359|synaptotagmin X	0.02446	
chr3	178103256	178103369	reg1016808.p1	7.371	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1188253	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	-1188361	-	TSC_hg19_v1_chr3_-_176914267 BX648935	-1189062	-	BC017825 NM_181361	150911	+	AF209747 NM_005832	173240	+	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	686253	-	AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3	0.195466	
chrX	17260741	17260873	reg1020709.p1	7.371	+	TSC_hg19_v1_chrX_+_16964847 AF010233 NM_001080975 NM_004726 AF511533 AF512951	-295875	+	TSC_hg19_v1_chrX_-_16888462 NM_002893	-372310	-	TSC_hg19_v1_chrX_-_16888456 X72841	-372356	-	TSC_hg19_v1_chrX_+_17393357 AK302437	132547	+	TSC_hg19_v1_chrX_+_17393541 AY436752 NM_198270	132735	+	TSC_hg19_v1_chrX_+_17393806 BC136415 BC171763	133004	+	AF010233|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_001080975|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_004726|REPS2|9185|RALBP1 associated Eps domain containing 2##AF511533|REPS2|9185|RALBP1 associated Eps domain containing 2##AF512951|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_002893|RBBP7|5931|retinoblastoma binding protein 7##X72841|RBBP7|5931|retinoblastoma binding protein 7##AK302437|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AY436752|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_198270|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC136415|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC171763|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	0.996215	CTCF.p2:-5:0.996
chr17	72195880	72195986	reg1017258.p2	7.370	+	NM_001144952	-555707	-	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-887793	-	BC157870 NM_001129885	-937915	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	3882	+	TSC_hg19_v1_chr17_+_72199849 BC000603	3920	+	TSC_hg19_v1_chr17_+_72209709 NM_032646 BC107492 BC107602 AK315163 AF319952 BC005168	13736	+	NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38##NM_032646|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107492|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107602|TTYH2|94015|tweety homolog 2 (Drosophila)##AK315163|TTYH2|94015|tweety homolog 2 (Drosophila)##AF319952|TTYH2|94015|tweety homolog 2 (Drosophila)##BC005168|TTYH2|94015|tweety homolog 2 (Drosophila)	0.137513	
chr19	41858499	41858601	reg1018268.p1	7.370	+	TSC_hg19_v1_chr19_+_41816132 BC011577 NM_052848	-42466	+	BC129981 TSC_hg19_v1_chr19_-_41813133	-45488	-	TSC_hg19_v1_chr19_+_41798338 AL050146	-60278	+	BT007245 CU692504 TSC_hg19_v1_chr19_-_41858962 EU832132 EU832225	439	-	TSC_hg19_v1_chr19_-_41859306 BC022242 AK291907	739	-	TSC_hg19_v1_chr19_-_41859420 BC000125 BC001180	848	-	BC011577|CCDC97|90324|coiled-coil domain containing 97##NM_052848|CCDC97|90324|coiled-coil domain containing 97##AL050146|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##BT007245|TGFB1|7040|transforming growth factor, beta 1##EU832132|TGFB1|7040|transforming growth factor, beta 1##EU832225|TGFB1|7040|transforming growth factor, beta 1##BC022242|TGFB1|7040|transforming growth factor, beta 1##AK291907|TGFB1|7040|transforming growth factor, beta 1##BC000125|TGFB1|7040|transforming growth factor, beta 1##BC001180|TGFB1|7040|transforming growth factor, beta 1	0.919181	CTCF.p2:4:0.919
chr5	81147782	81147897	reg1016321.p1	7.370	+	TSC_hg19_v1_chr5_-_81046990 NM_012446	-100731	-	TSC_hg19_v1_chr5_-_81046929 AB528651 CU677799 DQ891620 DQ894812 EU176592 EU831646 EU831730 AK293544 AK074537 AK294864 AK297494 AF161465 AF077048 AK299858 AK312337 CR936787 AL080076 BC017020	-100940	-	BC075011 BC075010 AK122960 AB078619 BC089437 NM_130767 TSC_hg19_v1_chr5_-_80690052	-457837	-	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	120006	+	AF318326 TSC_hg19_v1_chr5_+_81267992	120151	+	TSC_hg19_v1_chr5_+_81268100 AL136912	120259	+	NM_012446|SSBP2|23635|single-stranded DNA binding protein 2##DQ891620|SSBP2|23635|single-stranded DNA binding protein 2##DQ894812|SSBP2|23635|single-stranded DNA binding protein 2##EU176592|SSBP2|23635|single-stranded DNA binding protein 2##EU831646|SSBP2|23635|single-stranded DNA binding protein 2##EU831730|SSBP2|23635|single-stranded DNA binding protein 2##AK293544|SSBP2|23635|single-stranded DNA binding protein 2##AK074537|SSBP2|23635|single-stranded DNA binding protein 2##AK294864|SSBP2|23635|single-stranded DNA binding protein 2##AK297494|SSBP2|23635|single-stranded DNA binding protein 2##AF161465|SSBP2|23635|single-stranded DNA binding protein 2##AF077048|SSBP2|23635|single-stranded DNA binding protein 2##AK299858|SSBP2|23635|single-stranded DNA binding protein 2##AK312337|SSBP2|23635|single-stranded DNA binding protein 2##CR936787|SSBP2|23635|single-stranded DNA binding protein 2##AL080076|SSBP2|23635|single-stranded DNA binding protein 2##BC017020|SSBP2|23635|single-stranded DNA binding protein 2##BC075011|ACOT12|134526|acyl-CoA thioesterase 12##BC075010|ACOT12|134526|acyl-CoA thioesterase 12##AK122960|ACOT12|134526|acyl-CoA thioesterase 12##AB078619|ACOT12|134526|acyl-CoA thioesterase 12##BC089437|ACOT12|134526|acyl-CoA thioesterase 12##NM_130767|ACOT12|134526|acyl-CoA thioesterase 12##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AF318326|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AL136912|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)	0.0	
chr2	219033708	219033850	reg1018573.p1	7.369	+	M68932 BC072397 BC028221 AK309632 AK312668 U11871 L19591 NM_000634 AK298647	-2094	-	NM_001557 U11874 L19593 U11875 BC037961 AK290906 AK312664	-42990	+	U11872 NM_001168298	-43775	+	TSC_hg19_v1_chr2_+_219081867 NM_152862	48090	+	TSC_hg19_v1_chr2_+_219081905 U50523	48123	+	TSC_hg19_v1_chr2_+_219081914 AK290268 BC000590	48154	+	BC072397|CXCR1|3577|chemokine (C-X-C motif) receptor 1##BC028221|CXCR1|3577|chemokine (C-X-C motif) receptor 1##AK309632|CXCR1|3577|chemokine (C-X-C motif) receptor 1##AK312668|CXCR1|3577|chemokine (C-X-C motif) receptor 1##U11871|CXCR1|3577|chemokine (C-X-C motif) receptor 1##L19591|CXCR1|3577|chemokine (C-X-C motif) receptor 1##NM_000634|CXCR1|3577|chemokine (C-X-C motif) receptor 1##AK298647|CXCR1|3577|chemokine (C-X-C motif) receptor 1##NM_001557|CXCR2|3579|chemokine (C-X-C motif) receptor 2##U11874|CXCR2|3579|chemokine (C-X-C motif) receptor 2##L19593|CXCR2|3579|chemokine (C-X-C motif) receptor 2##U11875|CXCR2|3579|chemokine (C-X-C motif) receptor 2##BC037961|CXCR2|3579|chemokine (C-X-C motif) receptor 2##AK290906|CXCR2|3579|chemokine (C-X-C motif) receptor 2##AK312664|CXCR2|3579|chemokine (C-X-C motif) receptor 2##U11872|CXCR2|3579|chemokine (C-X-C motif) receptor 2##NM_001168298|CXCR2|3579|chemokine (C-X-C motif) receptor 2##NM_152862|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##U50523|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##AK290268|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##BC000590|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa	0.999792	CTCF.p2:2:1.000
chr2	6244174	6244299	reg1018554.p1	7.369	+	U23752 AB028641 NM_003108 BC025789 AB464713	-411421	+	AK302299 NM_018436 BC029652	-2538439	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-2601667	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	761664	-	TSC_hg19_v1_chr2_-_7006650 AK308509	762467	-	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	773627	+	U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2	0.821231	CTCF.p2:12:0.807
chr12	43676052	43676180	reg1021319.p1	7.368	+	BC114939 BC114940 AF399844 AF543759 AF543760 AK056499 TSC_hg19_v1_chr12_-_42983549 NM_153026	-692624	-	TSC_hg19_v1_chr12_-_42877811 NM_001144882 NM_001144883	-798317	-	AK122881 TSC_hg19_v1_chr12_-_42877772	-798358	-	AF488804 AJ515153 AJ515154 NM_025003	269607	-	AL136759 TSC_hg19_v1_chr12_-_44152566 BX647494 NM_001098615 AK097331 AK225903 NM_001098614 BC020781 CR627435 BC068502 AK092030 AX747323 NM_031292	476459	-	AK304583 NM_001114182 NM_001145256 NM_001145257 NM_001145258 NM_016123 AK299944 AK314288 TSC_hg19_v1_chr12_+_44152757	476635	+	BC114939|PRICKLE1|144165|prickle homolog 1 (Drosophila)##BC114940|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF399844|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543759|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543760|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK056499|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_153026|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF488804|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AJ515153|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AJ515154|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##NM_025003|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AL136759|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BX647494|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098615|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK097331|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK225903|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098614|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC020781|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##CR627435|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC068502|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK092030|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_031292|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK304583|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001114182|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145256|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145257|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145258|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_016123|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK299944|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK314288|IRAK4|51135|interleukin-1 receptor-associated kinase 4	0.281354	CTCF.p2:15:0.281
chr15	58731253	58731413	reg1020417.p1	7.368	+	NM_000236 X07228 AK293324 AK309448 TSC_hg19_v1_chr15_+_58724189 D83548 BC132825 BC136495 J03895 J03540 AB528021 HQ258274	-7131	+	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	-300847	+	NM_001206897 NM_003888 NM_170696	-373213	-	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	310456	-	TSC_hg19_v1_chr15_-_59041833 AK300472	310489	-	TSC_hg19_v1_chr15_-_59041988 BC126253 BC143935 NM_001110	310721	-	NM_000236|LIPC|3990|lipase, hepatic##X07228|LIPC|3990|lipase, hepatic##AK293324|LIPC|3990|lipase, hepatic##AK309448|LIPC|3990|lipase, hepatic##D83548|LIPC|3990|lipase, hepatic##BC132825|LIPC|3990|lipase, hepatic##BC136495|LIPC|3990|lipase, hepatic##J03895|LIPC|3990|lipase, hepatic##J03540|LIPC|3990|lipase, hepatic##HQ258274|LIPC|3990|lipase, hepatic##AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10##AK300472|ADAM10|102|ADAM metallopeptidase domain 10##BC126253|ADAM10|102|ADAM metallopeptidase domain 10##BC143935|ADAM10|102|ADAM metallopeptidase domain 10##NM_001110|ADAM10|102|ADAM metallopeptidase domain 10	0.0	
chr4	146761431	146761568	reg1018012.p1	7.368	+	NM_001080531	-160144	+	TSC_hg19_v1_chr4_+_146540536 AK126662 NM_172250	-220953	+	U59912 NM_001003688 U54826 AK293055	-357541	+	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	98178	-	BC033879 TSC_hg19_v1_chr4_-_146859976	98469	-	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	335368	+	NM_001080531|C4orf51|646603|chromosome 4 open reading frame 51##AK126662|MMAA|166785|methylmalonic aciduria (cobalamin deficiency) cblA type##NM_172250|MMAA|166785|methylmalonic aciduria (cobalamin deficiency) cblA type##U59912|SMAD1|4086|SMAD family member 1##NM_001003688|SMAD1|4086|SMAD family member 1##U54826|SMAD1|4086|SMAD family member 1##AK293055|SMAD1|4086|SMAD family member 1##AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827##NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.992926	CTCF.p2:19:0.993
chr8	102345229	102345351	reg1020024.p1	7.368	+	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	-127336	-	TSC_hg19_v1_chr8_-_102217877 NM_001042511	-127414	-	BC035233 TSC_hg19_v1_chr8_-_102217845 BC015925 AF125099 AF275802 AF275809 AK290477 BC068524	-127597	-	TSC_hg19_v1_chr8_+_102504667 NM_024915 AK296817 AK310221	159375	+	TSC_hg19_v1_chr8_+_102504840 AK023844 AK292853 BC069618 BC069633 BC069638 BC129822 BC129823	159620	+	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	457893	-	NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706##NM_001042511|ZNF706|51123|zinc finger protein 706##BC035233|ZNF706|51123|zinc finger protein 706##BC015925|ZNF706|51123|zinc finger protein 706##AF125099|ZNF706|51123|zinc finger protein 706##AF275802|ZNF706|51123|zinc finger protein 706##AF275809|ZNF706|51123|zinc finger protein 706##AK290477|ZNF706|51123|zinc finger protein 706##BC068524|ZNF706|51123|zinc finger protein 706##NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta	0.010499	
chr8	125901099	125901213	reg1016590.p1	7.368	+	TSC_hg19_v1_chr8_-_125740689 AF086645 NM_014751	-160433	-	EF560715 TSC_hg19_v1_chr8_-_125740463 AK027015	-160711	-	TSC_hg19_v1_chr8_-_125716430 U50573	-184724	-	NM_152412 BX537876 AK095321 BC130515 BC130517	84392	+	NM_003129 TSC_hg19_v1_chr8_+_126010746 AK301792 BX647605	109577	+	TSC_hg19_v1_chr8_+_126010748 BX647400	109620	+	AF086645|MTSS1|9788|metastasis suppressor 1##NM_014751|MTSS1|9788|metastasis suppressor 1##EF560715|MTSS1|9788|metastasis suppressor 1##AK027015|MTSS1|9788|metastasis suppressor 1##U50573|MTSS1|9788|metastasis suppressor 1##NM_152412|ZNF572|137209|zinc finger protein 572##BX537876|ZNF572|137209|zinc finger protein 572##AK095321|ZNF572|137209|zinc finger protein 572##BC130515|ZNF572|137209|zinc finger protein 572##BC130517|ZNF572|137209|zinc finger protein 572##NM_003129|SQLE|6713|squalene epoxidase##AK301792|SQLE|6713|squalene epoxidase##BX647605|SQLE|6713|squalene epoxidase##BX647400|SQLE|6713|squalene epoxidase	0.333483	CTCF.p2:-13:0.333
chrX	151985771	151985868	reg1017568.p2	7.368	+	BC017389 BC016803 BC000340 AK292384 BC005963 NM_005362	-47603	-	AF080246 AF136715 NM_001080848 NM_001129828 NM_004909 BC119735 BC119734 NM_001129826	-58048	+	BC109188 NM_005361 NM_175742 NM_175743 BC108720 AK290443	-63451	-	TSC_hg19_v1_chrX_-_151999272 AK311940 BC013873 BC005334 NM_004344 X72964	13462	-	NM_001129765 NM_015922 U47105 BC007816 TSC_hg19_v1_chrX_+_151999551	13715	+	TSC_hg19_v1_chrX_+_151999576 BC000245	13758	+	BC017389|MAGEA3|4102|melanoma antigen family A, 3##BC016803|MAGEA3|4102|melanoma antigen family A, 3##BC000340|MAGEA3|4102|melanoma antigen family A, 3##AK292384|MAGEA3|4102|melanoma antigen family A, 3##BC005963|MAGEA3|4102|melanoma antigen family A, 3##NM_005362|MAGEA3|4102|melanoma antigen family A, 3##AF080246|CSAG3|389903|CSAG family, member 3##AF136715|CSAG3|389903|CSAG family, member 3##NM_001080848|CSAG2|728461|CSAG family, member 2##NM_001129828|CSAG3|389903|CSAG family, member 3##NM_004909|CSAG2|728461|CSAG family, member 2##BC119735|CSAG3|389903|CSAG family, member 3##BC119734|CSAG3|389903|CSAG family, member 3##NM_001129826|CSAG3|389903|CSAG family, member 3##BC109188|MAGEA2|4101|melanoma antigen family A, 2##NM_005361|MAGEA2|4101|melanoma antigen family A, 2##NM_175742|MAGEA2|4101|melanoma antigen family A, 2##NM_175743|MAGEA2|4101|melanoma antigen family A, 2##BC108720|MAGEA2|4101|melanoma antigen family A, 2##AK290443|MAGEA2|4101|melanoma antigen family A, 2##AK311940|CETN2|1069|centrin, EF-hand protein, 2##BC013873|CETN2|1069|centrin, EF-hand protein, 2##BC005334|CETN2|1069|centrin, EF-hand protein, 2##NM_004344|CETN2|1069|centrin, EF-hand protein, 2##X72964|CETN2|1069|centrin, EF-hand protein, 2##NM_001129765|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##NM_015922|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##U47105|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##BC007816|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##BC000245|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like	0.468484	CTCF.p2:7:0.468
chr1	155995795	155995926	reg1021420.p1	7.367	+	TSC_hg19_v1_chr1_-_155990725 X74104 BC011791 BX649192 AK300678 AK313821 NM_003145	-5121	-	BC010085 AK222600 D37991 TSC_hg19_v1_chr1_-_155990703 BC000341 AY251536	-5154	-	TSC_hg19_v1_chr1_-_155959876 AB014551	-35989	-	AB209566 AB587408 TSC_hg19_v1_chr1_-_156023537 AK098368 AK314413 BC018403 AK302895 BC063841 NM_020131 AK023354	27655	-	NM_001145264 NM_014017 TSC_hg19_v1_chr1_+_156024639 AK307086 AF070659 BC024190 CU692872 DQ892965 DQ896212	28737	+	AF274025 BC009831 NM_020387 BC033322 AF083124	35113	+	X74104|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##BX649192|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##AK300678|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##AK313821|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##NM_003145|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##AK222600|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##D37991|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##BC000341|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##AY251536|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##AB014551|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AB209566|UBQLN4|56893|ubiquilin 4##AK098368|UBQLN4|56893|ubiquilin 4##AK314413|UBQLN4|56893|ubiquilin 4##BC018403|UBQLN4|56893|ubiquilin 4##AK302895|UBQLN4|56893|ubiquilin 4##BC063841|UBQLN4|56893|ubiquilin 4##NM_020131|UBQLN4|56893|ubiquilin 4##NM_001145264|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##NM_014017|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##AK307086|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##AF070659|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##BC024190|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##DQ892965|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##DQ896212|LAMTOR2|28956|late endosomal/lysosomal adaptor, MAPK and MTOR activator 2##AF274025|RAB25|57111|RAB25, member RAS oncogene family##BC009831|RAB25|57111|RAB25, member RAS oncogene family##NM_020387|RAB25|57111|RAB25, member RAS oncogene family##BC033322|RAB25|57111|RAB25, member RAS oncogene family##AF083124|RAB25|57111|RAB25, member RAS oncogene family	0.11968	
chr1	161352069	161352178	reg1017860.p1	7.367	+	NM_001013625	-14460	-	NM_001035511 NM_001035512 NM_001035513 NM_003001 TSC_hg19_v1_chr1_+_161284170 AK131051 AK293687 AK294305 BC020808 BC066329 U57877 AB211234 AB211235 AB201252 AB212048 BC012735 BC033626 D49737	-67944	+	BT006765 DQ895885 EU176378 S66705 D10537 BC006491 AK313555 TSC_hg19_v1_chr1_-_161279760 NM_000530	-72381	-	TSC_hg19_v1_chr1_+_161475246 NM_001136219 NM_021642 BC019931 AK226059 AK225438 AK298657 AK315225 Y00644 AK225601 M31932 CU676732 AK298734 BC020823 AB529040 DQ892037 DQ895228 J03619 M28697 X62572	123112	+	NM_002155	141912	+	CU676090 CU689692 AK223268 TSC_hg19_v1_chr1_-_161519555 BC033678 AK223295 X52645 AB528616 CU691394	167456	-	NM_001013625|C1orf192|257177|chromosome 1 open reading frame 192##NM_001035511|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001035512|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001035513|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_003001|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK131051|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK293687|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK294305|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC020808|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC066329|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##U57877|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB211234|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB211235|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB201252|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB212048|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC012735|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC033626|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##D49737|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BT006765|MPZ|4359|myelin protein zero##DQ895885|MPZ|4359|myelin protein zero##EU176378|MPZ|4359|myelin protein zero##S66705|MPZ|4359|myelin protein zero##D10537|MPZ|4359|myelin protein zero##BC006491|MPZ|4359|myelin protein zero##AK313555|MPZ|4359|myelin protein zero##NM_000530|MPZ|4359|myelin protein zero##NM_001136219|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##NM_021642|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##BC019931|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK226059|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK225438|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK298657|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK315225|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##Y00644|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK225601|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##M31932|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK298734|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##BC020823|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##DQ892037|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##DQ895228|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##J03619|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##M28697|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##X62572|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##NM_002155|HSPA6|3310|heat shock 70kDa protein 6 (HSP70B')##AK223268|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##BC033678|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK223295|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##X52645|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)	0.36735	CTCF.p2:-15:0.367
chr1	39074070	39074196	reg1018411.p1	7.367	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-561684	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-595703	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-595748	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	251253	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	264883	-	AK312811 BC051675 AK123051 NM_030772	273144	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.906558	CTCF.p2:-9:0.907
chr4	76633695	76633791	reg1017041.p2	7.367	+	TSC_hg19_v1_chr4_-_76598625 NM_203504 NM_203505	-35091	-	TSC_hg19_v1_chr4_-_76598595 BC011731 AK291772	-35164	-	AF053535 AF145284 TSC_hg19_v1_chr4_-_76598560	-35183	-	TSC_hg19_v1_chr4_-_76649558 AK311578	15932	-	TSC_hg19_v1_chr4_+_76649761 BC016672 AL832010 BC006398	16021	+	TSC_hg19_v1_chr4_+_76649814 AK314289	16072	+	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)	0.869569	CTCF.p2:-8:0.870
chrX	154377333	154377438	reg1018455.p2	7.367	+	TSC_hg19_v1_chrX_+_154299784 AK310286 X64643 AK299194 AK313544 BC002999 BC006540 AB462964 AM392829 AY438030 CU678330 AK298886	-77595	+	TSC_hg19_v1_chrX_+_154299709 NM_001018055 NM_001242640 NM_024332	-77678	+	TSC_hg19_v1_chrX_-_154299405 BC002600 X64644 NM_001018024 NM_001018025	-77938	-	NM_003372 TSC_hg19_v1_chrX_+_154444736 BC009570 AK313420 BC046094 Y17394 BC040002 AB464347 BT019604 CU692296	67344	+	AL834460 TSC_hg19_v1_chrX_-_154493774 AY052478 NM_171998 BC009714	116419	-	AB463493 AM393055 AY191592 DQ892014 DQ895204 BC022305 BC005367 AK292785 Y12696 NM_001289	186475	-	AK310286|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##X64643|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK299194|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK313544|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC002999|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC006540|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AM392829|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AY438030|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK298886|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_001018055|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_001242640|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_024332|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##NM_001018025|MTCP1|4515|mature T-cell proliferation 1##NM_003372|VBP1|7411|von Hippel-Lindau binding protein 1##BC009570|VBP1|7411|von Hippel-Lindau binding protein 1##AK313420|VBP1|7411|von Hippel-Lindau binding protein 1##BC046094|VBP1|7411|von Hippel-Lindau binding protein 1##Y17394|VBP1|7411|von Hippel-Lindau binding protein 1##BC040002|VBP1|7411|von Hippel-Lindau binding protein 1##BT019604|VBP1|7411|von Hippel-Lindau binding protein 1##AL834460|RAB39B|116442|RAB39B, member RAS oncogene family##AY052478|RAB39B|116442|RAB39B, member RAS oncogene family##NM_171998|RAB39B|116442|RAB39B, member RAS oncogene family##BC009714|RAB39B|116442|RAB39B, member RAS oncogene family##AM393055|CLIC2|1193|chloride intracellular channel 2##AY191592|CLIC2|1193|chloride intracellular channel 2##DQ892014|CLIC2|1193|chloride intracellular channel 2##DQ895204|CLIC2|1193|chloride intracellular channel 2##BC022305|CLIC2|1193|chloride intracellular channel 2##BC005367|CLIC2|1193|chloride intracellular channel 2##AK292785|CLIC2|1193|chloride intracellular channel 2##Y12696|CLIC2|1193|chloride intracellular channel 2##NM_001289|CLIC2|1193|chloride intracellular channel 2	0.947471	CTCF.p2:-2:0.947
chr11	67113449	67113554	reg1019581.p2	7.366	+	AK096155 TSC_hg19_v1_chr11_+_67085309	-28187	+	TSC_hg19_v1_chr11_+_67071027 AK074432 AK001790 AK094226 BC007709 AB527672 AB072360 AB099291	-42460	+	NM_017857 TSC_hg19_v1_chr11_+_67070955 AK000522	-42560	+	AF179890 BC001334 TSC_hg19_v1_chr11_-_67121006 BC070250 AB209274 NM_021173	7503	-	DQ891525 DQ894715 AB528390 AY049779 BC066229 BC066230 BC066231 AF172854 BC012939 AF176911 NM_013246	27605	-	AK298052 NM_001166212	28146	-	AK096155|LOC100130987|100130987|uncharacterized LOC100130987##AK074432|SSH3|54961|slingshot homolog 3 (Drosophila)##AK001790|SSH3|54961|slingshot homolog 3 (Drosophila)##AK094226|SSH3|54961|slingshot homolog 3 (Drosophila)##BC007709|SSH3|54961|slingshot homolog 3 (Drosophila)##AB072360|SSH3|54961|slingshot homolog 3 (Drosophila)##AB099291|SSH3|54961|slingshot homolog 3 (Drosophila)##NM_017857|SSH3|54961|slingshot homolog 3 (Drosophila)##AK000522|SSH3|54961|slingshot homolog 3 (Drosophila)##AF179890|POLD4|57804|polymerase (DNA-directed), delta 4##BC001334|POLD4|57804|polymerase (DNA-directed), delta 4##BC070250|POLD4|57804|polymerase (DNA-directed), delta 4##AB209274|POLD4|57804|polymerase (DNA-directed), delta 4##NM_021173|POLD4|57804|polymerase (DNA-directed), delta 4##DQ891525|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ894715|CLCF1|23529|cardiotrophin-like cytokine factor 1##AY049779|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066229|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066230|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066231|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF172854|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC012939|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF176911|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_013246|CLCF1|23529|cardiotrophin-like cytokine factor 1##AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1	0.425037	CTCF.p2:-1:0.425
chr1	31894398	31894508	reg1017967.p1	7.366	+	AK093784 AK316357 AX748305 NM_001199039 NM_018565 AK296118	-7766	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	-8387	+	NM_001199037 AK298512	-11420	+	NM_001204414 NM_022164 TSC_hg19_v1_chr1_+_32042115 AK292770 AK075398 AK296322 AK298382	147650	+	TSC_hg19_v1_chr1_+_32042122 AY358421	147669	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	147689	+	AK093784|SERINC2|347735|serine incorporator 2##AK316357|SERINC2|347735|serine incorporator 2##NM_001199039|SERINC2|347735|serine incorporator 2##NM_018565|SERINC2|347735|serine incorporator 2##AK296118|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##NM_001204414|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_022164|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK292770|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK075398|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK296322|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298382|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AY358421|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1	0.128022	
chr17	66462362	66462482	reg1016452.p1	7.366	+	AY691424 CU691786 TSC_hg19_v1_chr17_-_66453638 BC039867 AK301830 AK000917 NM_017983	-8811	-	AX750577 AX750581 U79745 AK313121 AK290417 BC064832 NM_001174166 NM_004694	-175092	-	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	-207088	+	TSC_hg19_v1_chr17_+_66508140 NM_212471 Y07642	45701	+	TSC_hg19_v1_chr17_+_66508161 BC093042	45744	+	TSC_hg19_v1_chr17_+_66508546 NM_002734 NM_212472	46113	+	AY691424|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##BC039867|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK301830|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK000917|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_017983|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AX750581|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G##NM_212471|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##Y07642|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC093042|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##NM_002734|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##NM_212472|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	0.997287	CTCF.p2:35:0.997
chr2	231466349	231466499	reg1019383.p1	7.366	+	AK091898 NM_001206704	-184954	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-185468	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-185505	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	111122	+	TSC_hg19_v1_chr2_+_231577633 BC020570	111220	+	AK292382 NM_001130849 NM_001130850 AK315692	111854	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.0	
chr3	24190676	24190757	reg1016323.p1	7.366	+	TSC_hg19_v1_chr3_+_23987516 AK301925 NM_001145425	-203154	+	TSC_hg19_v1_chr3_+_23986776 NM_005126 D16815 AK313464 BC045613 BC070035	-203901	+	NM_001253380 AY347528 L25899 AB529129 BT019672 CU677095 CU687134	-231444	+	GQ456948 GQ456949 GQ869479 GQ919288 AY286469 AY286468 AY286465 AY286471 TSC_hg19_v1_chr3_-_24536294 AY286467 AY286466 AK096628 M26747 NM_000461 NM_001128176 NM_001128177 NM_001252634 X04707	345528	-	AY286470 TSC_hg19_v1_chr3_-_24536493	345761	-	TSC_hg19_v1_chr3_+_25469751 AF157483 NM_016152	1279043	+	AK301925|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001145425|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001253380|RPL15|6138|ribosomal protein L15##AY347528|RPL15|6138|ribosomal protein L15##L25899|RPL15|6138|ribosomal protein L15##BT019672|RPL15|6138|ribosomal protein L15##GQ456948|THRB|7068|thyroid hormone receptor, beta##GQ456949|THRB|7068|thyroid hormone receptor, beta##GQ869479|THRB|7068|thyroid hormone receptor, beta##GQ919288|THRB|7068|thyroid hormone receptor, beta##AY286469|THRB|7068|thyroid hormone receptor, beta##AY286468|THRB|7068|thyroid hormone receptor, beta##AY286465|THRB|7068|thyroid hormone receptor, beta##AY286471|THRB|7068|thyroid hormone receptor, beta##AY286467|THRB|7068|thyroid hormone receptor, beta##AY286466|THRB|7068|thyroid hormone receptor, beta##AK096628|THRB|7068|thyroid hormone receptor, beta##M26747|THRB|7068|thyroid hormone receptor, beta##NM_000461|THRB|7068|thyroid hormone receptor, beta##NM_001128176|THRB|7068|thyroid hormone receptor, beta##NM_001128177|THRB|7068|thyroid hormone receptor, beta##NM_001252634|THRB|7068|thyroid hormone receptor, beta##X04707|THRB|7068|thyroid hormone receptor, beta##AY286470|THRB|7068|thyroid hormone receptor, beta##AF157483|RARB|5915|retinoic acid receptor, beta##NM_016152|RARB|5915|retinoic acid receptor, beta	0.138853	
chrX	131765729	131765859	reg1017987.p1	7.366	+	BC042090 NM_001170704 TSC_hg19_v1_chrX_-_131624064	-141761	-	AF491305 EU446986 BC074775 BC074776 AB077698 AB077699 AF467070 AJ427918 AJ427919 AY072692 NM_018388 NM_133486	-192117	-	AY372211 AK002178 NM_001170701 NM_001170702 AK300248 NM_001170703	-218209	-	TSC_hg19_v1_chrX_-_132091486 BC037325 AK295118 AL049679 AB067777 AB067776 AK295041	325607	-	AK075402 TSC_hg19_v1_chrX_-_132092281 BC094718	326462	-	AK056706 NM_001077188 NM_147175	329628	-	BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)##EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC037325|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295118|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AL049679|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067777|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067776|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295041|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK056706|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_001077188|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_147175|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2	0.932271	CTCF.p2:28:0.932
chr14	107280899	107281005	reg1017798.p1	7.365	+	DQ205161 AY392971 AF085654 X58399 X58398 BC002792 TSC_hg19_v1_chr14_-_107259820	-21232	-	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	-61954	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	-69651	-	None	None	None	None	None	None	None	None	None	X58399|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##X58398|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##BC002792|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.993389	CTCF.p2:-1:0.993
chr14	70480149	70480248	reg1018900.p2	7.365	+	NM_001034852 NM_022137 TSC_hg19_v1_chr14_+_70346132 AK289988 AK313063 AJ249900 BC011548 BC008608	-134069	+	CU687020 HQ258189 BC074724 BC126298 BC136355 AY544127 BC069822 BC069799 L21893 AK314028 NM_003049	-216260	-	AF070562 TSC_hg19_v1_chr14_+_70236305	-243911	+	AK096553 AJ745101 AJ745102 BC114217 NM_182936 AK122728 BC142969 NM_001130417	66694	-	BC036783 BX248763 TSC_hg19_v1_chr14_-_70655669 AF510501 AF510502 AF510503 NM_033262 NM_058240 NM_182932 NM_183002	175489	-	CR457199 AB528661 CU674840 BC001702 TSC_hg19_v1_chr14_-_70826389	346148	-	NM_001034852|SMOC1|64093|SPARC related modular calcium binding 1##NM_022137|SMOC1|64093|SPARC related modular calcium binding 1##AK289988|SMOC1|64093|SPARC related modular calcium binding 1##AK313063|SMOC1|64093|SPARC related modular calcium binding 1##AJ249900|SMOC1|64093|SPARC related modular calcium binding 1##BC011548|SMOC1|64093|SPARC related modular calcium binding 1##BC008608|SMOC1|64093|SPARC related modular calcium binding 1##HQ258189|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC074724|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC126298|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC136355|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AY544127|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC069822|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##BC069799|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##L21893|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AK314028|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##NM_003049|SLC10A1|6554|solute carrier family 10 (sodium/bile acid cotransporter family), member 1##AF070562|SRSF5|6430|serine/arginine-rich splicing factor 5##AK096553|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745101|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AJ745102|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC114217|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182936|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AK122728|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC142969|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_001130417|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BC036783|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##BX248763|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510501|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510502|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##AF510503|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_033262|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_058240|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_182932|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##NM_183002|SLC8A3|6547|solute carrier family 8 (sodium/calcium exchanger), member 3##CR457199|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC001702|COX16|51241|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	0.22828	CTCF.p2:-1:0.228
chr2	200350813	200350933	reg1017177.p1	7.365	+	AK291463 NM_015265	-14885	-	TSC_hg19_v1_chr2_-_200329812 AB209376 NM_001172517	-21053	-	AB028957 TSC_hg19_v1_chr2_-_200325214	-25632	-	AB568489 TSC_hg19_v1_chr2_-_200715872	364990	-	BC039445 TSC_hg19_v1_chr2_-_200715916	365040	-	TSC_hg19_v1_chr2_+_200775981 NM_153689	425104	+	AK291463|SATB2|23314|SATB homeobox 2##NM_015265|SATB2|23314|SATB homeobox 2##AB209376|SATB2|23314|SATB homeobox 2##NM_001172517|SATB2|23314|SATB homeobox 2##AB028957|SATB2|23314|SATB homeobox 2##AB568489|FONG|348751|uncharacterized LOC348751##BC039445|FONG|348751|uncharacterized LOC348751##NM_153689|C2orf69|205327|chromosome 2 open reading frame 69	0.178132	
chr11	2024187	2024308	reg1018505.p3	7.364	+	TSC_hg19_v1_chr11_-_2019073 AK056774 AK092486 AK309887 AK311497	-5176	-	BC040073 TSC_hg19_v1_chr11_-_2019016	-5236	-	BC002550 TSC_hg19_v1_chr11_-_2018986 BC040852	-5307	-	TSC_hg19_v1_chr11_-_2152963 AF318382	128715	-	TSC_hg19_v1_chr11_-_2156727 AB528666 BT007013 CU674260 DQ892721 DQ895970	132489	-	S51971 TSC_hg19_v1_chr11_-_2158501	134257	-	AK056774|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AK092486|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC040073|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC002550|RPS12|6206|ribosomal protein S12##BC040852|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AF318382|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##BT007013|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ892721|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ895970|IGF2|3481|insulin-like growth factor 2 (somatomedin A)	0.0	
chr3	148084634	148084783	reg1018408.p2	7.364	+	BC104848 BC104850 TSC_hg19_v1_chr3_+_147127864 AB464362	-956846	+	TSC_hg19_v1_chr3_+_147127156 NM_003412	-957537	+	NM_001243256 NM_032153	-960113	-	NM_000685 NM_004835 NM_009585 NM_031850 TSC_hg19_v1_chr3_+_148415688 AK291541 BC068494 BC022447 M87290 S77410 X65699	330979	+	NM_032049	363258	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	460890	+	BC104848|ZIC1|7545|Zic family member 1##BC104850|ZIC1|7545|Zic family member 1##NM_003412|ZIC1|7545|Zic family member 1##NM_001243256|ZIC4|84107|Zic family member 4##NM_032153|ZIC4|84107|Zic family member 4##NM_000685|AGTR1|185|angiotensin II receptor, type 1##NM_004835|AGTR1|185|angiotensin II receptor, type 1##NM_009585|AGTR1|185|angiotensin II receptor, type 1##NM_031850|AGTR1|185|angiotensin II receptor, type 1##AK291541|AGTR1|185|angiotensin II receptor, type 1##BC068494|AGTR1|185|angiotensin II receptor, type 1##BC022447|AGTR1|185|angiotensin II receptor, type 1##M87290|AGTR1|185|angiotensin II receptor, type 1##S77410|AGTR1|185|angiotensin II receptor, type 1##X65699|AGTR1|185|angiotensin II receptor, type 1##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)	0.251193	CTCF.p2:0:0.251
chr7	42019495	42019619	reg1018666.p1	7.364	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-276872	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1844948	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1845026	+	NM_000168	257060	-	TSC_hg19_v1_chr7_-_42276797 AK308429	257238	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	932032	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.0	
chr14	50296920	50297058	reg1019631.p1	7.363	+	TSC_hg19_v1_chr14_+_50234917 AF113131	-62068	+	TSC_hg19_v1_chr14_+_50234849 NM_014315 AF244137 BC002335 BC024192 AK001771 BX161429	-62152	+	TSC_hg19_v1_chr14_+_50234282 AK056298	-62686	+	TSC_hg19_v1_chr14_-_50319495 AK000913	22494	-	TSC_hg19_v1_chr14_-_50319497 AK304695 AK308537	22507	-	TSC_hg19_v1_chr14_-_50319530 AK295010 AK293236 BC006001 BC056687 NM_004713	22544	-	AF113131|KLHDC2|23588|kelch domain containing 2##NM_014315|KLHDC2|23588|kelch domain containing 2##AF244137|KLHDC2|23588|kelch domain containing 2##BC002335|KLHDC2|23588|kelch domain containing 2##BC024192|KLHDC2|23588|kelch domain containing 2##AK001771|KLHDC2|23588|kelch domain containing 2##BX161429|KLHDC2|23588|kelch domain containing 2##AK056298|KLHDC2|23588|kelch domain containing 2##AK000913|NEMF|9147|nuclear export mediator factor##AK304695|NEMF|9147|nuclear export mediator factor##AK308537|NEMF|9147|nuclear export mediator factor##AK295010|NEMF|9147|nuclear export mediator factor##AK293236|NEMF|9147|nuclear export mediator factor##BC006001|NEMF|9147|nuclear export mediator factor##BC056687|NEMF|9147|nuclear export mediator factor##NM_004713|NEMF|9147|nuclear export mediator factor	0.969261	CTCF.p2:7:0.969
chr19	52111301	52111439	reg1017599.p1	7.363	+	NM_007147 BC007778 AK292687 BC052997 D50419	-36823	+	U71382 BC140798 BC035359 AK300182 AK300170 AK308174 AK309903 D86358 D86359 NM_001177547 NM_001177548 NM_001177549 NM_001245 NM_198845 NM_198846	-76370	-	CU690206 AY358140 AF282256 AK225931 BC035809 AK095919 NM_053003 TSC_hg19_v1_chr19_-_52005055	-106341	-	DQ892433 AF170484 BC029896 AK225753 U71383 NM_003830	22287	-	AY358369 AY854038 AK298284 NM_001098612	38699	-	NM_001523 U59269 BC035837 AM904814	115862	-	NM_007147|ZNF175|7728|zinc finger protein 175##BC007778|ZNF175|7728|zinc finger protein 175##AK292687|ZNF175|7728|zinc finger protein 175##BC052997|ZNF175|7728|zinc finger protein 175##D50419|ZNF175|7728|zinc finger protein 175##U71382|SIGLEC6|946|sialic acid binding Ig-like lectin 6##BC140798|SIGLEC6|946|sialic acid binding Ig-like lectin 6##BC035359|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK300182|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK300170|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK308174|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK309903|SIGLEC6|946|sialic acid binding Ig-like lectin 6##D86358|SIGLEC6|946|sialic acid binding Ig-like lectin 6##D86359|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177547|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177548|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177549|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001245|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_198845|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_198846|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AY358140|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AF282256|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AK225931|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##BC035809|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AK095919|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##NM_053003|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##DQ892433|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AF170484|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##BC029896|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AK225753|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##U71383|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_003830|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AY854038|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##AK298284|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##NM_001098612|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##NM_001523|HAS1|3036|hyaluronan synthase 1##U59269|HAS1|3036|hyaluronan synthase 1##BC035837|HAS1|3036|hyaluronan synthase 1##AM904814|HAS1|3036|hyaluronan synthase 1	0.044928	
chr3	17182714	17182844	reg1020182.p1	7.363	+	BC036392 NM_015184	-208198	+	AB029015 NM_001144382	-256328	+	U65918 U66726 U66078 BC027595 NM_001351	-535813	-	AK310539 NM_001134381	558732	-	D86965 NM_014744	599619	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	601388	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.047112	
chr1	207872340	207872469	reg1019104.p1	7.361	+	NM_175710 BC109190 BC109191	-53917	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	-202826	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-244743	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	52989	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	53079	+	BX640941 TSC_hg19_v1_chr1_-_208059392	186919	-	NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein	1.108589	CTCF.p2:19:0.998
chr12	12966099	12966262	reg1019316.p1	7.361	+	BC126433 BC126435 NM_030817 TSC_hg19_v1_chr12_+_12938594 AK057867 AK225176 AK314392 AL136783	-27603	+	TSC_hg19_v1_chr12_+_12878853 NM_001130415 AK127712 BC042478 AM393383	-87324	+	TSC_hg19_v1_chr12_+_12870308 AK312461 NM_004064 BC001971 AK298335	-96054	+	AK310501 TSC_hg19_v1_chr12_+_12966285 AK302536 AL136666 NM_016355 NM_201224 AL833469 AK054574 BC068009 AB462951 AJ276704 AM393320 AM393714 AK225144 AF190165 BC009379 AK222940 AF078843 EF036507	110	+	NM_003979	77775	+	AK001761 TSC_hg19_v1_chr12_+_13044469	78231	+	BC126433|APOLD1|81575|apolipoprotein L domain containing 1##BC126435|APOLD1|81575|apolipoprotein L domain containing 1##NM_030817|APOLD1|81575|apolipoprotein L domain containing 1##AK225176|APOLD1|81575|apolipoprotein L domain containing 1##AK314392|APOLD1|81575|apolipoprotein L domain containing 1##AL136783|APOLD1|81575|apolipoprotein L domain containing 1##NM_001130415|APOLD1|81575|apolipoprotein L domain containing 1##BC042478|APOLD1|81575|apolipoprotein L domain containing 1##AM393383|APOLD1|81575|apolipoprotein L domain containing 1##AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK310501|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK302536|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AL136666|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_016355|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_201224|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AL833469|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK054574|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC068009|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AJ276704|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AM393320|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AM393714|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK225144|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AF190165|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC009379|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK222940|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AF078843|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##EF036507|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_003979|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AK001761|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A	0.183838	
chr15	88148224	88148353	reg1020905.p1	7.361	+	NM_152336	-1463047	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-1810093	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-1810191	-	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	651678	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	862340	-	AB049944 NM_022839 NM_176805	862395	+	NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11	0.0	
chr1	68523871	68523977	reg1017786.p1	7.361	+	BC005362 U96750 NM_004675	-7539	-	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	-224814	-	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	-225936	+	TSC_hg19_v1_chr1_-_68698207 BC137109 BC137113 BC110826 AB097018 AK074984 AK301613 BX648748 BX538320 NM_001002292 NM_001193334 AK074583 AK309779 DQ323735 AY359035 NM_024911	174233	-	AK289925 BC075035 BC075036 NM_000329 U18991	391712	-	CU688044 BC065304 BC011743 BC035506 BC041580 TSC_hg19_v1_chr1_-_68962723	438777	-	BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK124028|LOC100289178|100289178|uncharacterized LOC100289178##BC137109|WLS|79971|wntless homolog (Drosophila)##BC137113|WLS|79971|wntless homolog (Drosophila)##BC110826|WLS|79971|wntless homolog (Drosophila)##AB097018|WLS|79971|wntless homolog (Drosophila)##AK074984|WLS|79971|wntless homolog (Drosophila)##AK301613|WLS|79971|wntless homolog (Drosophila)##BX648748|WLS|79971|wntless homolog (Drosophila)##BX538320|WLS|79971|wntless homolog (Drosophila)##NM_001002292|WLS|79971|wntless homolog (Drosophila)##NM_001193334|WLS|79971|wntless homolog (Drosophila)##AK074583|WLS|79971|wntless homolog (Drosophila)##AK309779|WLS|79971|wntless homolog (Drosophila)##DQ323735|WLS|79971|wntless homolog (Drosophila)##AY359035|WLS|79971|wntless homolog (Drosophila)##NM_024911|WLS|79971|wntless homolog (Drosophila)##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC065304|DEPDC1|55635|DEP domain containing 1##BC011743|DEPDC1|55635|DEP domain containing 1##BC035506|DEPDC1|55635|DEP domain containing 1##BC041580|DEPDC1|55635|DEP domain containing 1	0.830068	CTCF.p2:-7:0.830
chr2	232354887	232354993	reg1019818.p2	7.361	+	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	-25705	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	-25805	-	AK001314 TSC_hg19_v1_chr2_-_232326464	-28511	-	BC033054 TSC_hg19_v1_chr2_-_232379076	24142	-	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	40214	-	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	102677	+	BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin##AK001314|NCL|4691|nucleolin##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57	0.830069	CTCF.p2:4:0.830
chr10	104813781	104813895	reg1017872.p1	7.360	+	TSC_hg19_v1_chr10_+_104678078 BC021222 AK023479 NM_017649 NM_199076 NM_199077	-135781	+	NM_020682 AK057833 AK225972 AF226730 AK309737 BC119637 BC119638	-184581	+	NM_001136200 NM_144591 AL832477 TSC_hg19_v1_chr10_+_104614015 AK098071 BC015994 BC040069 AK311742	-199837	+	BX648078 TSC_hg19_v1_chr10_-_104953030 BC001595 AK127670 AK291667 AK312517 D38524 NM_001134373 NM_012229	139209	-	BC157875 BC171885 NM_001143909 BC137242 BC137243 BC157829 BC171806	191835	+	TSC_hg19_v1_chr10_+_105036894 BC006359 NM_032727 S78296 DQ892733 DQ895980	223035	+	BC021222|CNNM2|54805|cyclin M2##AK023479|CNNM2|54805|cyclin M2##NM_017649|CNNM2|54805|cyclin M2##NM_199076|CNNM2|54805|cyclin M2##NM_199077|CNNM2|54805|cyclin M2##NM_020682|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK057833|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK225972|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AF226730|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK309737|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119637|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119638|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32##NM_144591|C10orf32|119032|chromosome 10 open reading frame 32##AL832477|C10orf32|119032|chromosome 10 open reading frame 32##AK098071|C10orf32|119032|chromosome 10 open reading frame 32##BC015994|C10orf32|119032|chromosome 10 open reading frame 32##BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT readthrough##AK311742|C10orf32|119032|chromosome 10 open reading frame 32##BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II##BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II##AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II##AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II##AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II##D38524|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II##BC157875|LOC729020|729020|rcRPE##BC171885|LOC729020|729020|rcRPE##NM_001143909|LOC729020|729020|rcRPE##BC137242|LOC729020|729020|rcRPE##BC137243|LOC729020|729020|rcRPE##BC157829|LOC729020|729020|rcRPE##BC171806|LOC729020|729020|rcRPE##BC006359|INA|9118|internexin neuronal intermediate filament protein, alpha##NM_032727|INA|9118|internexin neuronal intermediate filament protein, alpha##S78296|INA|9118|internexin neuronal intermediate filament protein, alpha##DQ892733|INA|9118|internexin neuronal intermediate filament protein, alpha##DQ895980|INA|9118|internexin neuronal intermediate filament protein, alpha	0.0	
chr16	3989175	3989324	reg1018647.p1	7.360	+	TSC_hg19_v1_chr16_-_3930715 U85962	-58532	-	TSC_hg19_v1_chr16_-_3930711 U47741	-58551	-	AB210043 NM_001079846 NM_004380	-59129	-	BC136657 BC136658 TSC_hg19_v1_chr16_-_4165831	176570	-	BC151207 AB011092 BC151229 TSC_hg19_v1_chr16_-_4166045	176785	-	AJ133123 NM_001116 TSC_hg19_v1_chr16_-_4166252	176981	-	U85962|CREBBP|1387|CREB binding protein##U47741|CREBBP|1387|CREB binding protein##AB210043|CREBBP|1387|CREB binding protein##NM_001079846|CREBBP|1387|CREB binding protein##NM_004380|CREBBP|1387|CREB binding protein##BC136657|ADCY9|115|adenylate cyclase 9##BC136658|ADCY9|115|adenylate cyclase 9##BC151207|ADCY9|115|adenylate cyclase 9##AB011092|ADCY9|115|adenylate cyclase 9##BC151229|ADCY9|115|adenylate cyclase 9##AJ133123|ADCY9|115|adenylate cyclase 9##NM_001116|ADCY9|115|adenylate cyclase 9	0.423033	CTCF.p2:0:0.423
chr2	152882443	152882576	reg1011261.p2	7.360	+	AY054985 AK290049 NM_001005747	-52043	-	TSC_hg19_v1_chr2_-_152684998 NM_001037174 NM_012097 NM_177985	-197513	-	TSC_hg19_v1_chr2_-_152684936 AF087889 AK298937	-197563	-	AK294398 AK316045 TSC_hg19_v1_chr2_-_152955250 NM_001005746	72721	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	73038	-	TSC_hg19_v1_chr2_-_152955813 AK291378	73302	-	AY054985|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK290049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005747|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001037174|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_012097|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_177985|ARL5A|26225|ADP-ribosylation factor-like 5A##AF087889|ARL5A|26225|ADP-ribosylation factor-like 5A##AK298937|ARL5A|26225|ADP-ribosylation factor-like 5A##AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK291378|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	0.97141	CTCF.p2:16:0.971
chr2	17652223	17652332	reg1018399.p1	7.360	+	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	-805133	-	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-1570110	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-1570282	+	DQ860102 NM_001099218	47428	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	69610	+	TSC_hg19_v1_chr2_+_17721989 AF039555 U14747 AB001104	69743	+	BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1##AF039555|VSNL1|7447|visinin-like 1##U14747|VSNL1|7447|visinin-like 1##AB001104|VSNL1|7447|visinin-like 1	0.970649	CTCF.p2:-15:0.971
chr3	124869484	124869625	reg1018189.p2	7.360	+	BC063528 TSC_hg19_v1_chr3_-_124842461	-27099	-	AB384586 NM_020733 TSC_hg19_v1_chr3_-_124774842	-94754	-	BC067235 TSC_hg19_v1_chr3_-_124732404	-137162	-	AF345197 HQ258349 BC126158 BC126160 AF390442 NM_001195483	60663	-	AK123001 TSC_hg19_v1_chr3_-_124931591 AX721165 AK131070 NM_024628	62031	-	AF039019 AL833616 AF432210 AJ236885 L04282 BC035591 BC018971 AK314203 TSC_hg19_v1_chr3_-_125094153 BC050260 NM_021964	224546	-	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)##BC067235|HEG1|57493|HEG homolog 1 (zebrafish)##AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AK123001|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_024628|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF039019|ZNF148|7707|zinc finger protein 148##AL833616|ZNF148|7707|zinc finger protein 148##AF432210|ZNF148|7707|zinc finger protein 148##AJ236885|ZNF148|7707|zinc finger protein 148##L04282|ZNF148|7707|zinc finger protein 148##BC035591|ZNF148|7707|zinc finger protein 148##BC018971|ZNF148|7707|zinc finger protein 148##AK314203|ZNF148|7707|zinc finger protein 148##BC050260|ZNF148|7707|zinc finger protein 148##NM_021964|ZNF148|7707|zinc finger protein 148	0.783136	CTCF.p2:7:0.783
chr6_qbl_hap6	2332557	2332640	reg1015627.p1	7.360	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.481265	CTCF.p2:6:0.481
chr7	4889238	4889348	reg1016604.p1	7.360	+	TSC_hg19_v1_chr7_+_4815296 AB007875	-74007	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	-74032	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	-167042	+	DQ891226 DQ894411 AF218840 BC036653 NM_020144 TSC_hg19_v1_chr7_-_4901662 AK312788	12256	-	TSC_hg19_v1_chr7_-_4923339 AK302549 AB058752 AK294745 NM_018059	33999	-	AY424288 BC037881 BC048346 TSC_hg19_v1_chr7_-_4998841 AK094524 BC067905 NM_001100600 NM_198403	109506	-	AB007875|KIAA0415|9907|KIAA0415##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##DQ891226|PAPOLB|56903|poly(A) polymerase beta (testis specific)##DQ894411|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AF218840|PAPOLB|56903|poly(A) polymerase beta (testis specific)##BC036653|PAPOLB|56903|poly(A) polymerase beta (testis specific)##NM_020144|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AK312788|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AK302549|RADIL|55698|Ras association and DIL domains##AB058752|RADIL|55698|Ras association and DIL domains##AK294745|RADIL|55698|Ras association and DIL domains##NM_018059|RADIL|55698|Ras association and DIL domains##AY424288|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC037881|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC048346|MMD2|221938|monocyte to macrophage differentiation-associated 2##AK094524|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC067905|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_001100600|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_198403|MMD2|221938|monocyte to macrophage differentiation-associated 2	0.841641	CTCF.p2:-4:0.842
chr6	116765403	116765517	reg1019371.p2	7.359	+	TSC_hg19_v1_chr6_-_116692863 AK298559 AK316303	-72591	-	TSC_hg19_v1_chr6_+_116692109 NM_013352 AF098066	-73317	+	BC039245 NM_001080976 BC043526	-164139	+	NM_001010919	17095	+	BC032556 NM_153711 AK094140 AK315572	67361	+	AK300309 AY358252 NM_153036 BC057769 AK056801	84748	+	AK298559|LOC100287467|100287467|uncharacterized LOC100287467##AK316303|LOC100287467|100287467|uncharacterized LOC100287467##NM_013352|DSE|29940|dermatan sulfate epimerase##AF098066|DSE|29940|dermatan sulfate epimerase##BC039245|DSE|29940|dermatan sulfate epimerase##NM_001080976|DSE|29940|dermatan sulfate epimerase##BC043526|DSE|29940|dermatan sulfate epimerase##NM_001010919|FAM26F|441168|family with sequence similarity 26, member F##BC032556|FAM26E|254228|family with sequence similarity 26, member E##NM_153711|FAM26E|254228|family with sequence similarity 26, member E##AK094140|FAM26E|254228|family with sequence similarity 26, member E##AK315572|FAM26E|254228|family with sequence similarity 26, member E##AK300309|FAM26D|221301|family with sequence similarity 26, member D##AY358252|FAM26D|221301|family with sequence similarity 26, member D##NM_153036|FAM26D|221301|family with sequence similarity 26, member D##BC057769|FAM26D|221301|family with sequence similarity 26, member D##AK056801|FAM26D|221301|family with sequence similarity 26, member D	0.031793	
chrX	125904349	125904453	reg1018930.p1	7.359	+	TSC_hg19_v1_chrX_-_125686794 BC035674 NM_178470	-217585	-	BC136673 BC136674 NM_001013628	-604322	-	NM_001195272	-1450433	+	NM_001122716	49345	+	AY251532 BC014597 NM_138289	1281959	-	BC117447 BC143954 BC143955 AK026426 TSC_hg19_v1_chrX_-_128657421	2753007	-	BC035674|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##NM_178470|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##BC136673|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##BC136674|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##NM_001013628|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##NM_001195272|LOC100129520|100129520|testis expressed sequence 13-like##NM_001122716|CXorf64|100130613|chromosome X open reading frame 64##AY251532|ACTRT1|139741|actin-related protein T1##BC014597|ACTRT1|139741|actin-related protein T1##NM_138289|ACTRT1|139741|actin-related protein T1##BC117447|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC143954|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC143955|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##AK026426|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	0.255745	CTCF.p2:-33:0.256
chr14	60043516	60043623	reg1018495.p1	7.358	+	NM_001164399	-21	-	TSC_hg19_v1_chr14_+_59951234 NM_001098625 NM_016475 AF151047 AF161445 AF212245 BC010359 AK027591 BC005198 AK021683 AL136696 BX161501 AK056145 AK298209	-92342	+	AK294843 TSC_hg19_v1_chr14_-_59951127	-92442	-	CR457030 L10335 TSC_hg19_v1_chr14_-_60097308	53696	-	TSC_hg19_v1_chr14_-_60097342 BC000314 BC003003 AK297492	53775	-	AK290534 NM_206852 TSC_hg19_v1_chr14_-_60097533	53964	-	NM_001164399|C14orf38|729665|chromosome 14 open reading frame 38##NM_001098625|JKAMP|51528|JNK1/MAPK8-associated membrane protein##NM_016475|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AF151047|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AF161445|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AF212245|JKAMP|51528|JNK1/MAPK8-associated membrane protein##BC010359|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK027591|JKAMP|51528|JNK1/MAPK8-associated membrane protein##BC005198|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK021683|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AL136696|JKAMP|51528|JNK1/MAPK8-associated membrane protein##BX161501|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK056145|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK298209|JKAMP|51528|JNK1/MAPK8-associated membrane protein##CR457030|RTN1|6252|reticulon 1##L10335|RTN1|6252|reticulon 1##BC000314|RTN1|6252|reticulon 1##BC003003|RTN1|6252|reticulon 1##AK297492|RTN1|6252|reticulon 1##AK290534|RTN1|6252|reticulon 1##NM_206852|RTN1|6252|reticulon 1	0.98756	CTCF.p2:15:0.988
chr16	15968855	15968981	reg1019278.p2	7.358	+	BC101677 BC104906 BC143364 AB020673 AY520816 AY520817 TSC_hg19_v1_chr16_-_15950886 AK308389 BC031040 EU489063 NM_001040113 NM_001040114 NM_002474 NM_022844	-18049	-	TSC_hg19_v1_chr16_-_15835382 D10667	-133471	-	BX641087 TSC_hg19_v1_chr16_-_15833973	-134963	-	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	13535	-	AL832498 TSC_hg19_v1_chr16_-_15982471	13567	-	TSC_hg19_v1_chr16_+_16043442 L05628 NM_004996 NM_019862 NM_019898 NM_019899 NM_019900 X78338	74446	+	BC101677|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC104906|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC143364|MYH11|4629|myosin, heavy chain 11, smooth muscle##AB020673|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520816|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520817|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK308389|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC031040|MYH11|4629|myosin, heavy chain 11, smooth muscle##EU489063|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040113|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040114|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_002474|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_022844|MYH11|4629|myosin, heavy chain 11, smooth muscle##D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle##BX641087|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##AL832498|FOPNL|123811|FGFR1OP N-terminal like##L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	0.117781	
chr18	46777358	46777453	reg1017814.p1	7.358	+	AF010193 NM_001190821 NM_005904	-300325	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	-300638	-	AK301535 NM_001190822	-301703	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	209646	-	TSC_hg19_v1_chr18_-_47013575 AB097012	236160	-	TSC_hg19_v1_chr18_-_47013599 BC093004	236194	-	AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin##AB097012|C18orf32|497661|chromosome 18 open reading frame 32##BC093004|C18orf32|497661|chromosome 18 open reading frame 32	0.922924	CTCF.p2:4:0.908
chr22	30841288	30841431	reg1018359.p2	7.358	+	NM_001003704 NM_016498 AF151076 AF060924 BC030989 AK026104 BC009300 TSC_hg19_v1_chr22_+_30821776 BC001608 BC014446 CR456345 BC046132 AB528187 CU013056 CU013344	-19620	+	NM_001204204 NM_012429 NM_033382 AL096881 TSC_hg19_v1_chr22_+_30793006 AK223587 BC048337 AK314390 AK091402 BC058915 AB033012 CR456571 AK303751 AK296540 CU013170 CU013458	-48344	+	NM_001017981 AB464176	-58057	-	AY158086 BC069641 BC101001 BC101002 BC101003 BC101004 AK298079 AK131358 AY240872 NM_174975	26629	-	AY158085 FJ824055 BC139912 BC136358 BC136359 AK093448 AK092002 AK093418 AX747303 AX748114 NM_001161368 NM_174977	60288	-	NM_001193336	101309	-	NM_001003704|MTFP1|51537|mitochondrial fission process 1##NM_016498|MTFP1|51537|mitochondrial fission process 1##AF151076|MTFP1|51537|mitochondrial fission process 1##AF060924|MTFP1|51537|mitochondrial fission process 1##BC030989|MTFP1|51537|mitochondrial fission process 1##AK026104|MTFP1|51537|mitochondrial fission process 1##BC009300|MTFP1|51537|mitochondrial fission process 1##BC001608|MTFP1|51537|mitochondrial fission process 1##BC014446|MTFP1|51537|mitochondrial fission process 1##CR456345|MTFP1|51537|mitochondrial fission process 1##BC046132|MTFP1|51537|mitochondrial fission process 1##NM_001204204|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_012429|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_033382|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AL096881|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK223587|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##BC048337|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK314390|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK091402|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##BC058915|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AB033012|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CR456571|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK303751|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK296540|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CU013170|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CU013458|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_001017981|RNF215|200312|ring finger protein 215##AY158086|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC069641|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101001|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101002|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101003|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101004|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AK298079|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AK131358|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AY240872|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##NM_174975|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AY158085|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##FJ824055|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##BC139912|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##BC136358|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##BC136359|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##AK093448|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##AK092002|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##AK093418|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##NM_001161368|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##NM_174977|SEC14L4|284904|SEC14-like 4 (S. cerevisiae)##NM_001193336|SEC14L6|730005|SEC14-like 6 (S. cerevisiae)	0.901676	CTCF.p2:-1:0.902
chr3	133758419	133758599	reg1041991.p1	7.358	+	BC051347 TSC_hg19_v1_chr3_-_133748836 NM_005630	-9636	-	U70867 BC041140 AK303550 AK309561 TSC_hg19_v1_chr3_-_133748770	-9759	-	AK025826 AK225383 BC051274 BC064502 BC082257 NM_025041	-109923	-	TSC_hg19_v1_chr3_-_133969397 AB527382	210955	-	TSC_hg19_v1_chr3_-_133969650 NM_001005861 NM_002958 X69970 X96588	211117	-	TSC_hg19_v1_chr3_-_134093290 AK223598 AK001343 AB023206 AK291616 NM_016201	334856	-	BC051347|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##NM_005630|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##U70867|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##BC041140|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK303550|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK309561|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK025826|C3orf36|80111|chromosome 3 open reading frame 36##AK225383|C3orf36|80111|chromosome 3 open reading frame 36##BC051274|C3orf36|80111|chromosome 3 open reading frame 36##BC064502|C3orf36|80111|chromosome 3 open reading frame 36##BC082257|C3orf36|80111|chromosome 3 open reading frame 36##NM_025041|C3orf36|80111|chromosome 3 open reading frame 36##NM_001005861|RYK|6259|RYK receptor-like tyrosine kinase##NM_002958|RYK|6259|RYK receptor-like tyrosine kinase##X69970|RYK|6259|RYK receptor-like tyrosine kinase##X96588|RYK|6259|RYK receptor-like tyrosine kinase##AK223598|AMOTL2|51421|angiomotin like 2##AK001343|AMOTL2|51421|angiomotin like 2##AB023206|AMOTL2|51421|angiomotin like 2##AK291616|AMOTL2|51421|angiomotin like 2##NM_016201|AMOTL2|51421|angiomotin like 2	0.378526	CTCF.p2:27:0.379
chr13	114607494	114607625	reg1019612.p1	7.357	+	TSC_hg19_v1_chr13_-_114567041 NM_000820	-40516	-	TSC_hg19_v1_chr13_-_114567037 BC030708	-40523	-	TSC_hg19_v1_chr13_-_114567011 BC038984 L13720	-40538	-	AB385165 TSC_hg19_v1_chr13_-_114898005 AK289746 X89399	290427	-	TSC_hg19_v1_chr13_-_114898028 AK295861 AK313795	290466	-	TSC_hg19_v1_chr13_-_114898058 AK128094	290507	-	NM_000820|GAS6|2621|growth arrest-specific 6##BC030708|GAS6|2621|growth arrest-specific 6##BC038984|GAS6|2621|growth arrest-specific 6##L13720|GAS6|2621|growth arrest-specific 6##AK289746|RASA3|22821|RAS p21 protein activator 3##X89399|RASA3|22821|RAS p21 protein activator 3##AK295861|RASA3|22821|RAS p21 protein activator 3##AK313795|RASA3|22821|RAS p21 protein activator 3##AK128094|RASA3|22821|RAS p21 protein activator 3	0.027401	
chr5	135400371	135400518	reg1019927.p1	7.357	+	TSC_hg19_v1_chr5_+_135364731 AB590111 DQ892178 EU176690 CU678832 BT009820	-35710	+	NM_000358 TSC_hg19_v1_chr5_+_135364679 AK094581 AK094055 AK222833 AK298603 AK093916 AK303643 BC026352 BC000097 BC004972 M77349	-35800	+	AB590696 BC093670 BC101579 AK314092 D63521 NM_002302	-109823	-	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	68085	+	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	68140	+	NM_001167576 NM_001167577 NM_020389	300719	-	DQ892178|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##EU176690|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BT009820|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##NM_000358|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK094581|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK094055|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK222833|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK298603|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK093916|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##AK303643|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC026352|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC000097|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC004972|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##M77349|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BC093670|LECT2|3950|leukocyte cell-derived chemotaxin 2##BC101579|LECT2|3950|leukocyte cell-derived chemotaxin 2##AK314092|LECT2|3950|leukocyte cell-derived chemotaxin 2##D63521|LECT2|3950|leukocyte cell-derived chemotaxin 2##NM_002302|LECT2|3950|leukocyte cell-derived chemotaxin 2##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7	0.033685	
chr15	41165944	41166094	reg1019023.p2	7.356	+	TSC_hg19_v1_chr15_+_41136676 NM_001032367 AK303899 BC004140 BT007425 CU676280 DQ890747 DQ892293 DQ895493	-29318	+	TSC_hg19_v1_chr15_+_41136245 AK314825 AK300195 NM_003710 NM_181642 BC018702 AY358969 AB000095 AY296715	-29669	+	AK000258 BC096716 BC098124 BC098150 BC098341 NM_001130143 NM_017726	-45114	-	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	428	-	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	20681	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	55679	+	NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK000258|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC096716|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098124|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098150|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098341|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##NM_001130143|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##NM_017726|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)	0.188828	
chr6	26924717	26924840	reg1018850.p1	7.356	+	TSC_hg19_v1_chr6_-_26659967 NM_001242797 NM_001242798 NM_001242799 NM_024639	-264826	-	TSC_hg19_v1_chr6_+_26597203 NM_013375 BC066313 BC048812 AB027258 AB463399 CU688138 CU690582 EU446795	-327571	+	TSC_hg19_v1_chr6_+_26538630 NM_006353 AK311841 BC001282	-386148	+	AB591038 BC014312 TSC_hg19_v1_chr6_-_27100575 NM_021058 AK311849	175787	-	TSC_hg19_v1_chr6_+_27100821 AK312124 NM_021064 L19778 BC067782 BC016677 AB590259 DQ891024 DQ894204 DQ894286	176039	+	BC016336 BC075806 AB590709 BC066250 BC067496 BC067497 HQ257982 NM_003495	182295	+	NM_001242797|ZNF322|79692|zinc finger protein 322##NM_001242798|ZNF322|79692|zinc finger protein 322##NM_001242799|ZNF322|79692|zinc finger protein 322##NM_024639|ZNF322|79692|zinc finger protein 322##NM_013375|ABT1|29777|activator of basal transcription 1##BC066313|ABT1|29777|activator of basal transcription 1##BC048812|ABT1|29777|activator of basal transcription 1##AB027258|ABT1|29777|activator of basal transcription 1##EU446795|ABT1|29777|activator of basal transcription 1##NM_006353|HMGN4|10473|high mobility group nucleosomal binding domain 4##AK311841|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC001282|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC014312|HIST1H2BJ|8970|histone cluster 1, H2bj##NM_021058|HIST1H2BJ|8970|histone cluster 1, H2bj##AK311849|HIST1H2BJ|8970|histone cluster 1, H2bj##AK312124|HIST1H2AG|8969|histone cluster 1, H2ag##NM_021064|HIST1H2AG|8969|histone cluster 1, H2ag##L19778|HIST1H2AG|8969|histone cluster 1, H2ag##BC067782|HIST1H2AG|8969|histone cluster 1, H2ag##BC016677|HIST1H2AG|8969|histone cluster 1, H2ag##DQ891024|HIST1H2AG|8969|histone cluster 1, H2ag##DQ894204|HIST1H2AG|8969|histone cluster 1, H2ag##DQ894286|HIST1H2AG|8969|histone cluster 1, H2ag##BC016336|HIST1H4I|8294|histone cluster 1, H4i##BC075806|HIST1H4I|8294|histone cluster 1, H4i##BC066250|HIST1H4I|8294|histone cluster 1, H4i##BC067496|HIST1H4I|8294|histone cluster 1, H4i##BC067497|HIST1H4I|8294|histone cluster 1, H4i##HQ257982|HIST2H4B|554313|histone cluster 2, H4b##NM_003495|HIST1H4I|8294|histone cluster 1, H4i	0.847397	CTCF.p2:-6:0.847
chr7	134440302	134440441	reg1021538.p1	7.356	+	NM_001724 NM_199186 TSC_hg19_v1_chr7_+_134331586 BC017050 AK315439 AK097778 X04327	-108786	+	NM_001080538	-206523	+	AF524864 NM_020299 BC008837	-228001	+	TSC_hg19_v1_chr7_+_134464170 NM_004342 NM_033138 NM_033157 AK289686	23795	+	TSC_hg19_v1_chr7_+_134464387 AK298524 AK304729 AF247820 M83216	24018	+	TSC_hg19_v1_chr7_+_134464419 BC040354	24051	+	NM_001724|BPGM|669|2,3-bisphosphoglycerate mutase##NM_199186|BPGM|669|2,3-bisphosphoglycerate mutase##BC017050|BPGM|669|2,3-bisphosphoglycerate mutase##AK315439|BPGM|669|2,3-bisphosphoglycerate mutase##AK097778|BPGM|669|2,3-bisphosphoglycerate mutase##X04327|BPGM|669|2,3-bisphosphoglycerate mutase##NM_001080538|AKR1B15|441282|aldo-keto reductase family 1, member B15##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_004342|CALD1|800|caldesmon 1##NM_033138|CALD1|800|caldesmon 1##NM_033157|CALD1|800|caldesmon 1##AK289686|CALD1|800|caldesmon 1##AK298524|CALD1|800|caldesmon 1##AK304729|CALD1|800|caldesmon 1##AF247820|CALD1|800|caldesmon 1##M83216|CALD1|800|caldesmon 1##BC040354|CALD1|800|caldesmon 1	0.591702	CTCF.p2:-2:0.592
chr7	372729	372844	reg1021162.p1	7.356	+	NM_001195127	-42651	+	BC040074 TSC_hg19_v1_chr7_+_193137	-179641	+	AF533706 NM_020223 TSC_hg19_v1_chr7_+_193043	-179769	+	TSC_hg19_v1_chr7_-_558849 AK292217	186048	-	X03795 X06374 TSC_hg19_v1_chr7_-_559093	186278	-	TSC_hg19_v1_chr7_-_559484 NM_002607 NM_033023	186699	-	NM_001195127|LOC100288524|100288524|forkhead box L1-like##BC040074|FAM20C|56975|family with sequence similarity 20, member C##AF533706|FAM20C|56975|family with sequence similarity 20, member C##NM_020223|FAM20C|56975|family with sequence similarity 20, member C##AK292217|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X03795|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X06374|PDGFA|5154|platelet-derived growth factor alpha polypeptide##NM_002607|PDGFA|5154|platelet-derived growth factor alpha polypeptide##NM_033023|PDGFA|5154|platelet-derived growth factor alpha polypeptide	0.994705	CTCF.p2:-9:0.995
chr11	45793594	45793709	reg1017879.p2	7.355	+	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	-106467	-	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	-485901	-	AF275818 NM_020229	-678088	+	NM_001145265 NM_001145266	31971	+	TSC_hg19_v1_chr11_+_45825944 AK225428 AK002182 AK091245	32263	+	AK074929 NM_018389 AK027394 AK027747 AK130181 AF326199	33040	+	AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1##AK225428|SLC35C1|55343|solute carrier family 35, member C1##AK002182|SLC35C1|55343|solute carrier family 35, member C1##AK091245|SLC35C1|55343|solute carrier family 35, member C1##AK074929|SLC35C1|55343|solute carrier family 35, member C1##NM_018389|SLC35C1|55343|solute carrier family 35, member C1##AK027394|SLC35C1|55343|solute carrier family 35, member C1##AK027747|SLC35C1|55343|solute carrier family 35, member C1##AF326199|SLC35C1|55343|solute carrier family 35, member C1	0.640413	CTCF.p2:21:0.640
chr1	172697283	172697415	reg1018264.p1	7.355	+	D38122 AK314874 NM_000639 X89102 BC017502 U08137 AF288573 U11821 AB528416 DQ893466 DQ896147 CU675998 AY225406 AY858799	-69100	+	TSC_hg19_v1_chr1_+_172502291 NM_016227 AK302509 AL035291 BC137125 BC144487	-194968	+	TSC_hg19_v1_chr1_+_172502152 AK302949 AJ250075 NM_014283	-195207	+	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	322707	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	477304	-	CR542033 D90224 X79929 NM_003326	479043	-	D38122|FASLG|356|Fas ligand (TNF superfamily, member 6)##AK314874|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_000639|FASLG|356|Fas ligand (TNF superfamily, member 6)##X89102|FASLG|356|Fas ligand (TNF superfamily, member 6)##BC017502|FASLG|356|Fas ligand (TNF superfamily, member 6)##U08137|FASLG|356|Fas ligand (TNF superfamily, member 6)##AF288573|FASLG|356|Fas ligand (TNF superfamily, member 6)##U11821|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ893466|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ896147|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY225406|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY858799|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_016227|C1orf9|51430|chromosome 1 open reading frame 9##AK302509|C1orf9|51430|chromosome 1 open reading frame 9##AL035291|C1orf9|51430|chromosome 1 open reading frame 9##BC137125|C1orf9|51430|chromosome 1 open reading frame 9##BC144487|C1orf9|51430|chromosome 1 open reading frame 9##AK302949|C1orf9|51430|chromosome 1 open reading frame 9##AJ250075|C1orf9|51430|chromosome 1 open reading frame 9##NM_014283|C1orf9|51430|chromosome 1 open reading frame 9##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	1.073883	CTCF.p2:-71:0.949
chr19	46273551	46273696	reg1016689.p2	7.354	+	NM_175875	-1127	-	AB464211 TSC_hg19_v1_chr19_-_46272110	-1508	-	TSC_hg19_v1_chr19_-_46234155 NM_001080469	-39476	-	TSC_hg19_v1_chr19_-_46283281 AB384925	9675	-	AK304749 M87312 NM_001081563	10188	-	S72883 TSC_hg19_v1_chr19_-_46285728 BC062553 L19268	12069	-	NM_175875|SIX5|147912|SIX homeobox 5##NM_001080469|FBXO46|23403|F-box protein 46##AK304749|DMPK|1760|dystrophia myotonica-protein kinase##M87312|DMPK|1760|dystrophia myotonica-protein kinase##NM_001081563|DMPK|1760|dystrophia myotonica-protein kinase##S72883|DMPK|1760|dystrophia myotonica-protein kinase##BC062553|DMPK|1760|dystrophia myotonica-protein kinase##L19268|DMPK|1760|dystrophia myotonica-protein kinase	0.966184	CTCF.p2:-27:0.966
chr4	38677109	38677263	reg1000416.p2	7.354	+	AF289565 TSC_hg19_v1_chr4_-_38666549	-10697	-	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	-11360	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-698169	+	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	107413	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	129233	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	181242	-	AF289565|FLJ13197|79667|uncharacterized FLJ13197##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6	0.0	
chr10	18601792	18601912	reg1020421.p1	7.353	+	NM_000724 AB208917 U95019	-52212	+	NM_201593 NM_201596 NM_201597 S60415 BC136409 AF137376 AF423191 AY393860 AY675091 AK296471 AK311694 AK307526 NM_001167945 NM_201571 NM_201572 AK293837	-172145	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	-361023	+	AK310943 NM_201590	27761	+	NM_201570 AK299873 AK295113	87711	+	AK074323 BC035778 NM_182543	338680	-	NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK310943|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201590|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK074323|NSUN6|221078|NOP2/Sun domain family, member 6##BC035778|NSUN6|221078|NOP2/Sun domain family, member 6##NM_182543|NSUN6|221078|NOP2/Sun domain family, member 6	0.756875	CTCF.p2:16:0.745
chr12	4073691	4073828	reg1018335.p1	7.353	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-91259	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-211377	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-211491	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	309285	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	356632	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	415041	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.990232	CTCF.p2:16:0.990
chr13	71860000	71860114	reg1019209.p1	7.353	+	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	-1177516	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-4055553	-	AK289924 NM_022843	-9870403	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	580202	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	580706	-	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	581377	-	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)	0.017335	
chr13	76056759	76056892	reg1016746.p2	7.353	+	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	-487	-	CR749622 TSC_hg19_v1_chr13_-_75901948	-154903	-	TSC_hg19_v1_chr13_-_74708425 AK291397	-1348429	-	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	55153	-	TSC_hg19_v1_chr13_+_76123890 AK313665 BC018125 NM_006002 M30496 CU676190 BT019359 CR456855	67099	+	AF330045 NM_005358	137744	+	AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##CR749622|TBC1D4|9882|TBC1 domain family, member 4##AK291397|KLF12|11278|Kruppel-like factor 12##AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6##AK313665|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BC018125|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_006002|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##M30496|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BT019359|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##CR456855|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7	0.58531	CTCF.p2:-11:0.585
chr16	20786193	20786310	reg1018490.p2	7.353	+	NM_005622 NM_202000 TSC_hg19_v1_chr16_+_20775331 AK223139 AK290322 X80062	-10907	+	BC000448 TSC_hg19_v1_chr16_-_20753141 AK000281 NM_017736	-33094	-	AB059429 BC125177 BC125178 NM_052956	-83674	-	AB590202 CU679731 DQ895001 DQ895002 TSC_hg19_v1_chr16_-_20817767	31508	-	AK292594 TSC_hg19_v1_chr16_-_20817795 AK304347 BC010503 NM_001142725 NM_080663 AK127391	31534	-	NM_001144924 NM_001199053 NM_030941 TSC_hg19_v1_chr16_+_20817848 BC007646 AF332193 AL136763	31565	+	NM_005622|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##NM_202000|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##AK223139|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##AK290322|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##X80062|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##BC000448|THUMPD1|55623|THUMP domain containing 1##AK000281|THUMPD1|55623|THUMP domain containing 1##NM_017736|THUMPD1|55623|THUMP domain containing 1##AB059429|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##BC125177|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##BC125178|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##NM_052956|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##DQ895001|ERI2|112479|ERI1 exoribonuclease family member 2##DQ895002|ERI2|112479|ERI1 exoribonuclease family member 2##AK292594|ERI2|112479|ERI1 exoribonuclease family member 2##AK304347|ERI2|112479|ERI1 exoribonuclease family member 2##BC010503|ERI2|112479|ERI1 exoribonuclease family member 2##NM_001142725|ERI2|112479|ERI1 exoribonuclease family member 2##NM_080663|ERI2|112479|ERI1 exoribonuclease family member 2##AK127391|ERI2|112479|ERI1 exoribonuclease family member 2##NM_001144924|LOC81691|81691|exonuclease NEF-sp##NM_001199053|LOC81691|81691|exonuclease NEF-sp##NM_030941|LOC81691|81691|exonuclease NEF-sp##BC007646|LOC81691|81691|exonuclease NEF-sp##AF332193|LOC81691|81691|exonuclease NEF-sp##AL136763|LOC81691|81691|exonuclease NEF-sp	0.915942	CTCF.p2:-2:0.878
chr4	176976254	176976348	reg1017310.p1	7.353	+	TSC_hg19_v1_chr4_-_176923575 NM_005277 NM_201592	-52692	-	AK226176 TSC_hg19_v1_chr4_-_176923545	-52761	-	BC022528 TSC_hg19_v1_chr4_-_176923504	-52807	-	BC146812 NM_170710 NM_181265 AF492460 TSC_hg19_v1_chr4_+_176987137	10760	+	TSC_hg19_v1_chr4_+_176987148 BC118549 BC118627 AK098748 DQ426895 DQ426896	10868	+	CU692400 TSC_hg19_v1_chr4_-_177116722 BC021731 BC029428 AY040204 NM_144644	140466	-	NM_005277|GPM6A|2823|glycoprotein M6A##NM_201592|GPM6A|2823|glycoprotein M6A##AK226176|GPM6A|2823|glycoprotein M6A##BC022528|GPM6A|2823|glycoprotein M6A##BC146812|WDR17|116966|WD repeat domain 17##NM_170710|WDR17|116966|WD repeat domain 17##NM_181265|WDR17|116966|WD repeat domain 17##AF492460|WDR17|116966|WD repeat domain 17##BC118549|WDR17|116966|WD repeat domain 17##BC118627|WDR17|116966|WD repeat domain 17##AK098748|WDR17|116966|WD repeat domain 17##DQ426895|WDR17|116966|WD repeat domain 17##DQ426896|WDR17|116966|WD repeat domain 17##BC021731|SPATA4|132851|spermatogenesis associated 4##BC029428|SPATA4|132851|spermatogenesis associated 4##AY040204|SPATA4|132851|spermatogenesis associated 4##NM_144644|SPATA4|132851|spermatogenesis associated 4	0.906844	CTCF.p2:2:0.907
chr12	49741494	49741605	reg1017796.p2	7.352	+	BC033236 NM_024902	-509	+	TSC_hg19_v1_chr12_+_49740718 AK055747	-846	+	BC110812 AF466366 NM_001008223	-10586	-	TSC_hg19_v1_chr12_+_49760679 AK095582 NM_023071	19140	+	TSC_hg19_v1_chr12_+_49761253 BC017767 AL833614 BC048299 AK292334 AK023202 BX648916 BC032441	19845	+	TSC_hg19_v1_chr12_+_49932842 AB033108 NM_012284 BC144254 BC150602 AB022696 AB384589	191471	+	BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##AK055747|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##BC110812|C1QL4|338761|complement component 1, q subcomponent-like 4##AF466366|C1QL4|338761|complement component 1, q subcomponent-like 4##NM_001008223|C1QL4|338761|complement component 1, q subcomponent-like 4##AK095582|SPATS2|65244|spermatogenesis associated, serine-rich 2##NM_023071|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2##AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2##BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2##AB033108|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##NM_012284|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC144254|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC150602|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AB022696|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3	0.998942	CTCF.p2:14:0.999
chr7	1704427	1704521	reg1016900.p1	7.352	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-94653	+	AB067495 TSC_hg19_v1_chr7_+_1609735	-94741	+	TSC_hg19_v1_chr7_+_1609724 AK054665	-94761	+	NM_001128636	44323	+	TSC_hg19_v1_chr7_-_1980177 BC018870	275689	-	AK310481 TSC_hg19_v1_chr7_-_2272542	568061	-	BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AB067495|KIAA1908|114796|uncharacterized LOC114796##AK054665|KIAA1908|114796|uncharacterized LOC114796##NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.0	
chr1	120125594	120125719	reg1019759.p1	7.351	+	NM_000862 S45679 AK291556 BC031999 M35493 X53321 M27137 DQ891161 DQ894342 CU689258 X55997	-75694	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	-167895	+	NM_001166120	-168103	+	NM_001080470	64733	-	NM_006623 AK315360 BC011262 TSC_hg19_v1_chr1_+_120254558 AK309662 AK310132 AF171237 BC000303 BC001349 BC023235 DQ892073 EU176546 AB528378 CR456795	128875	+	CR456850 BC044217 X83618 AK301594 AK313590 TSC_hg19_v1_chr1_-_120311529 AK302276 AK303777 NM_001166107 NM_005518	185854	-	NM_000862|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##S45679|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##AK291556|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##BC031999|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M35493|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X53321|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M27137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ891161|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ894342|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X55997|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_001080470|ZNF697|90874|zinc finger protein 697##NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase##AK315360|PHGDH|26227|phosphoglycerate dehydrogenase##BC011262|PHGDH|26227|phosphoglycerate dehydrogenase##AK309662|PHGDH|26227|phosphoglycerate dehydrogenase##AK310132|PHGDH|26227|phosphoglycerate dehydrogenase##AF171237|PHGDH|26227|phosphoglycerate dehydrogenase##BC000303|PHGDH|26227|phosphoglycerate dehydrogenase##BC001349|PHGDH|26227|phosphoglycerate dehydrogenase##BC023235|PHGDH|26227|phosphoglycerate dehydrogenase##DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase##EU176546|PHGDH|26227|phosphoglycerate dehydrogenase##CR456795|PHGDH|26227|phosphoglycerate dehydrogenase##CR456850|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##BC044217|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##X83618|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK301594|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK313590|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK302276|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK303777|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_001166107|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_005518|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)	0.32015	CTCF.p2:-32:0.320
chr12	20046557	20046696	reg1021672.p1	7.351	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-453438	+	TSC_hg19_v1_chr12_+_19592783 AB209384	-453831	+	TSC_hg19_v1_chr12_+_19592425 AK131361 NM_001114176 NM_153207 AK126973 BC022220	-454107	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	475572	+	AK308317 NM_001244683	678171	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	801869	+	BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##AK131361|AEBP2|121536|AE binding protein 2##NM_001114176|AEBP2|121536|AE binding protein 2##NM_153207|AEBP2|121536|AE binding protein 2##AK126973|AEBP2|121536|AE binding protein 2##BC022220|AEBP2|121536|AE binding protein 2##BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	0.0	
chr5	399963	400144	reg1016986.p1	7.351	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-95763	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-128248	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-128285	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	43177	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	43297	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	73059	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.0	
chr9	36633050	36633177	reg1020111.p1	7.351	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-60189	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-231938	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-232216	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	401303	-	TSC_hg19_v1_chr9_+_37079908 AK091718	446793	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	446895	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.800346	CTCF.p2:-15:0.800
chr10	88021780	88021899	reg1019148.p1	7.350	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-1837144	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-1890221	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-1933445	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	104424	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	259655	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	259691	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.987567	CTCF.p2:-11:0.988
chr20	39370286	39370420	reg1022923.p1	7.349	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-52476	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-1779364	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-1815285	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	287141	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	287311	+	TSC_hg19_v1_chr20_+_39765861 AB210028	395509	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.929036	CTCF.p2:-9:0.929
chr2	46063606	46063727	reg1017719.p1	7.349	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-184592	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-225259	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-268538	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	460925	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	461309	+	NM_001145051	643037	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.0	
chr7	102330458	102330584	reg1021351.p1	7.349	+	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	-18401	-	AK302217 NM_001031618 NM_001166339	-39750	+	EU341824 NM_001114403 AK296589	-47245	-	TSC_hg19_v1_chr7_+_102389473 NM_001145268 NM_001145269 BC029175 AK297455 AK298753 AK054745 DQ893359 DQ896678	58969	+	NM_001031692 NM_005824 TSC_hg19_v1_chr7_+_102553446 AK226021 AK225701 U32907 AK290305 BC027903 AY358889	222911	+	AK097537 NM_145032	384493	-	BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##EU341824|UPK3BL|100134938|uroplakin 3B-like##NM_001114403|UPK3BL|100134938|uroplakin 3B-like##NM_001145268|FAM185A|222234|family with sequence similarity 185, member A##NM_001145269|FAM185A|222234|family with sequence similarity 185, member A##BC029175|FAM185A|222234|family with sequence similarity 185, member A##AK297455|FAM185A|222234|family with sequence similarity 185, member A##AK298753|FAM185A|222234|family with sequence similarity 185, member A##AK054745|FAM185A|222234|family with sequence similarity 185, member A##DQ893359|FAM185A|222234|family with sequence similarity 185, member A##DQ896678|FAM185A|222234|family with sequence similarity 185, member A##NM_001031692|LRRC17|10234|leucine rich repeat containing 17##NM_005824|LRRC17|10234|leucine rich repeat containing 17##AK226021|LRRC17|10234|leucine rich repeat containing 17##AK225701|LRRC17|10234|leucine rich repeat containing 17##U32907|LRRC17|10234|leucine rich repeat containing 17##AK290305|LRRC17|10234|leucine rich repeat containing 17##BC027903|LRRC17|10234|leucine rich repeat containing 17##AY358889|LRRC17|10234|leucine rich repeat containing 17##AK097537|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_145032|FBXL13|222235|F-box and leucine-rich repeat protein 13	0.155716	
chr8	88707565	88707656	reg1030124.p1	7.349	+	AK093121 AX747937 BC117326 BC117328 NM_173538	-828937	+	BC150601 AF272900 NM_019098 DQ426865	-951698	-	AK292912 BC007017 BC008385 TSC_hg19_v1_chr8_+_87526694 BC066597 BC036242 AB014536 AF077226	-1180899	+	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	178649	-	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	632136	-	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	2062420	+	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3##AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3##NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3##AK292912|CPNE3|8895|copine III##BC007017|CPNE3|8895|copine III##BC008385|CPNE3|8895|copine III##BC066597|CPNE3|8895|copine III##BC036242|CPNE3|8895|copine III##AB014536|CPNE3|8895|copine III##AF077226|CPNE3|8895|copine III##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2	0.112878	
chr12	113877440	113877565	reg1018508.p1	7.348	+	TSC_hg19_v1_chr12_+_113860217 BC009849 NM_138432 BC091479 AF134473	-17305	+	J05037 TSC_hg19_v1_chr12_-_113841693 AK292760 BC020750 NM_006843	-35828	-	TSC_hg19_v1_chr12_+_113796394 BC030618	-81116	+	AF291181 NM_022363	32374	-	CU678656 EU831458 EU831545 AB385372 AB014582 BC004289 BC006137 AL117547 TSC_hg19_v1_chr12_-_114404131 AK291444 AK314606 NM_001146698 NM_001146699 NM_016196	526602	-	NM_080718 U80987 U89353 AB527531 EU446658	964202	-	BC009849|SDSL|113675|serine dehydratase-like##NM_138432|SDSL|113675|serine dehydratase-like##BC091479|SDSL|113675|serine dehydratase-like##AF134473|SDSL|113675|serine dehydratase-like##J05037|SDS|10993|serine dehydratase##AK292760|SDS|10993|serine dehydratase##BC020750|SDS|10993|serine dehydratase##NM_006843|SDS|10993|serine dehydratase##BC030618|PLBD2|196463|phospholipase B domain containing 2##AF291181|LHX5|64211|LIM homeobox 5##NM_022363|LHX5|64211|LIM homeobox 5##EU831458|RBM19|9904|RNA binding motif protein 19##EU831545|RBM19|9904|RNA binding motif protein 19##AB014582|RBM19|9904|RNA binding motif protein 19##BC004289|RBM19|9904|RNA binding motif protein 19##BC006137|RBM19|9904|RNA binding motif protein 19##AL117547|RBM19|9904|RNA binding motif protein 19##AK291444|RBM19|9904|RNA binding motif protein 19##AK314606|RBM19|9904|RNA binding motif protein 19##NM_001146698|RBM19|9904|RNA binding motif protein 19##NM_001146699|RBM19|9904|RNA binding motif protein 19##NM_016196|RBM19|9904|RNA binding motif protein 19##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5	0.924996	CTCF.p2:15:0.925
chr5	61521006	61521132	reg1017787.p2	7.348	+	AK094862 NM_173667	-587434	+	TSC_hg19_v1_chr5_+_60628085 NM_020928	-892971	+	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	-1062802	-	TSC_hg19_v1_chr5_+_61601970 NM_001098511 NM_001243952 NM_001243953 NM_004520	80904	+	TSC_hg19_v1_chr5_+_61602066 BC047544	81013	+	TSC_hg19_v1_chr5_+_61602278 AK297347 AK307880 EF560716 EF560728 EU832810 GQ129246 AK315866	81201	+	AK094862|C5orf64|285668|chromosome 5 open reading frame 64##NM_173667|C5orf64|285668|chromosome 5 open reading frame 64##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6##BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##NM_001098511|KIF2A|3796|kinesin heavy chain member 2A##NM_001243952|KIF2A|3796|kinesin heavy chain member 2A##NM_001243953|KIF2A|3796|kinesin heavy chain member 2A##NM_004520|KIF2A|3796|kinesin heavy chain member 2A##BC047544|KIF2A|3796|kinesin heavy chain member 2A##AK297347|KIF2A|3796|kinesin heavy chain member 2A##AK307880|KIF2A|3796|kinesin heavy chain member 2A##EF560716|KIF2A|3796|kinesin heavy chain member 2A##EF560728|KIF2A|3796|kinesin heavy chain member 2A##EU832810|KIF2A|3796|kinesin heavy chain member 2A##GQ129246|KIF2A|3796|kinesin heavy chain member 2A##AK315866|KIF2A|3796|kinesin heavy chain member 2A	0.985493	CTCF.p2:-6:0.985
chr7	134853957	134854062	reg1016303.p1	7.348	+	NM_018295 TSC_hg19_v1_chr7_+_134832838 AK001862 AK225055 AK301268 BC020942	-21162	+	TSC_hg19_v1_chr7_+_134671258 AK302827 NM_178563 BC030651 AL832281 AK023045 AK311252	-182724	+	BC014035 TSC_hg19_v1_chr7_+_134576197 BC061926 BC005006 D90452 D90453	-277736	+	NM_001243753 NM_001243755	216	-	TSC_hg19_v1_chr7_-_134855252 NM_001243752	1258	-	TSC_hg19_v1_chr7_-_134855449 AK026103 BC000168 BC050676 BC067350	1410	-	NM_018295|TMEM140|55281|transmembrane protein 140##AK001862|TMEM140|55281|transmembrane protein 140##AK225055|TMEM140|55281|transmembrane protein 140##AK301268|TMEM140|55281|transmembrane protein 140##BC020942|TMEM140|55281|transmembrane protein 140##AK302827|AGBL3|340351|ATP/GTP binding protein-like 3##NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3##BC030651|AGBL3|340351|ATP/GTP binding protein-like 3##AL832281|AGBL3|340351|ATP/GTP binding protein-like 3##AK023045|AGBL3|340351|ATP/GTP binding protein-like 3##BC014035|CALD1|800|caldesmon 1##BC061926|CALD1|800|caldesmon 1##BC005006|CALD1|800|caldesmon 1##D90452|CALD1|800|caldesmon 1##D90453|CALD1|800|caldesmon 1##NM_001243753|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243755|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243752|C7orf49|78996|chromosome 7 open reading frame 49##AK026103|C7orf49|78996|chromosome 7 open reading frame 49##BC000168|C7orf49|78996|chromosome 7 open reading frame 49##BC067350|C7orf49|78996|chromosome 7 open reading frame 49	0.997166	CTCF.p2:1:0.997
chr17_ctg5_hap1	1198229	1198336	reg1019445.p1	7.347	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999815	CTCF.p2:-6:1.000
chr19	1624572	1624696	reg1020240.p1	7.347	+	TSC_hg19_v1_chr19_-_1605464 NM_006830	-19161	-	AK312053 TSC_hg19_v1_chr19_-_1605462	-19172	-	TSC_hg19_v1_chr19_-_1605429 BC000462 BC003594 D55636	-19203	-	AB385055 BC110579 BC110580 M31523 NM_001136139	25631	-	M31222 NM_003200 TSC_hg19_v1_chr19_-_1652346	27705	-	NM_001080488 TSC_hg19_v1_chr19_+_1753823	129118	+	NM_006830|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##AK312053|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##BC000462|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##BC003594|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##D55636|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##BC110580|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##M31523|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_001136139|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_001080488|ONECUT3|390874|one cut homeobox 3	0.447602	CTCF.p2:-20:0.448
chr20	34026928	34027036	reg1018897.p2	7.347	+	AB593125 U13660 NM_000557	-992	-	TSC_hg19_v1_chr20_-_33999791 AK225281 AK293149 BC119013 BC122862 AY050659 NM_001184977 NM_018244 NM_199487	-27120	-	BC008871 AB528278 AM392884 AM393853 TSC_hg19_v1_chr20_-_33999777 AK001712 AK022650 AK022742 AK225557 AK293516 AK300130 AK302133 AK308819 BC105791	-27213	-	TSC_hg19_v1_chr20_+_34042987 AK307861 AB621828 AF049105 NM_007186	16092	+	AK058089 AK310337 NM_001145350	90481	-	NM_015966 NM_198398 TSC_hg19_v1_chr20_+_34129827 AF308298 AF077030 AF151812 EF206690 BC014014	102820	+	AB593125|GDF5|8200|growth differentiation factor 5##U13660|GDF5|8200|growth differentiation factor 5##NM_000557|GDF5|8200|growth differentiation factor 5##AK225281|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293149|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC119013|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC122862|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AY050659|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_001184977|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_018244|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_199487|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC008871|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AM392884|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AM393853|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK001712|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK022650|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK022742|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK225557|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293516|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK300130|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK302133|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK308819|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC105791|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK307861|CEP250|11190|centrosomal protein 250kDa##AF049105|CEP250|11190|centrosomal protein 250kDa##NM_007186|CEP250|11190|centrosomal protein 250kDa##AK058089|C20orf173|140873|chromosome 20 open reading frame 173##AK310337|C20orf173|140873|chromosome 20 open reading frame 173##NM_001145350|C20orf173|140873|chromosome 20 open reading frame 173##NM_015966|ERGIC3|51614|ERGIC and golgi 3##NM_198398|ERGIC3|51614|ERGIC and golgi 3##AF308298|ERGIC3|51614|ERGIC and golgi 3##AF077030|ERGIC3|51614|ERGIC and golgi 3##AF151812|ERGIC3|51614|ERGIC and golgi 3##EF206690|ERGIC3|51614|ERGIC and golgi 3##BC014014|ERGIC3|51614|ERGIC and golgi 3	0.153435	
chr9	120173963	120174080	reg1018672.p2	7.347	+	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	-724415	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	-724559	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	-1257951	+	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	3292	-	TSC_hg19_v1_chr9_-_120177336 BX649176	3313	-	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	292443	+	NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2##BX649176|ASTN2|23245|astrotactin 2##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4	0.938493	CTCF.p2:-4:0.938
chr10	82779034	82779136	reg1016775.p2	7.346	+	AK123978 NM_001145719	-478511	+	AK123885 NM_207372	-481428	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-564981	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	855997	+	DQ857894 NM_001165973	858357	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3120172	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.964556	CTCF.p2:-5:0.965
chr1	11845333	11845466	reg1020034.p1	7.346	+	AL833920 TSC_hg19_v1_chr1_+_11826837	-18581	+	AF312374 TSC_hg19_v1_chr1_+_11796222 BC011946 AB528670 AF165187 DQ892619 DQ895859	-49161	+	TSC_hg19_v1_chr1_+_11796198 AK290042 BC017328	-49209	+	TSC_hg19_v1_chr1_-_11866019 BC053509 AY046564 AK312907	20608	-	TSC_hg19_v1_chr1_-_11866080 NM_005957	20720	-	NM_001286 NM_021735 NM_021736 NM_021737 TSC_hg19_v1_chr1_+_11866223	20820	+	AL833920|C1orf167|284498|chromosome 1 open reading frame 167##AF312374|AGTRAP|57085|angiotensin II receptor-associated protein##BC011946|AGTRAP|57085|angiotensin II receptor-associated protein##AF165187|AGTRAP|57085|angiotensin II receptor-associated protein##DQ892619|AGTRAP|57085|angiotensin II receptor-associated protein##DQ895859|AGTRAP|57085|angiotensin II receptor-associated protein##AK290042|AGTRAP|57085|angiotensin II receptor-associated protein##BC017328|AGTRAP|57085|angiotensin II receptor-associated protein##BC053509|MTHFR|4524|methylenetetrahydrofolate reductase (NAD(P)H)##AY046564|MTHFR|4524|methylenetetrahydrofolate reductase (NAD(P)H)##AK312907|MTHFR|4524|methylenetetrahydrofolate reductase (NAD(P)H)##NM_005957|MTHFR|4524|methylenetetrahydrofolate reductase (NAD(P)H)##NM_001286|CLCN6|1185|chloride channel 6##NM_021735|CLCN6|1185|chloride channel 6##NM_021736|CLCN6|1185|chloride channel 6##NM_021737|CLCN6|1185|chloride channel 6	0.980292	CTCF.p2:0:0.980
chr17	39478702	39478832	reg1019670.p1	7.346	+	BC069078 AJ406952 BC069297 NM_031964	-6822	-	NM_001146182	-13263	-	NM_030975	-67132	+	BC069135 NM_004138 AJ633621	28292	-	X82634 CU679547 DQ893452 DQ896286 NM_002279 BC009971	47195	-	NM_021013 BC041070	59877	-	BC069078|KRTAP17-1|83902|keratin associated protein 17-1##AJ406952|KRTAP17-1|83902|keratin associated protein 17-1##BC069297|KRTAP17-1|83902|keratin associated protein 17-1##NM_031964|KRTAP17-1|83902|keratin associated protein 17-1##NM_001146182|KRTAP16-1|100505753|keratin associated protein 16-1##NM_030975|KRTAP9-9|81870|keratin associated protein 9-9##BC069135|KRT33A|3883|keratin 33A##NM_004138|KRT33A|3883|keratin 33A##AJ633621|KRT33A|3883|keratin 33A##X82634|KRT33B|3884|keratin 33B##DQ893452|KRT33B|3884|keratin 33B##DQ896286|KRT33B|3884|keratin 33B##NM_002279|KRT33B|3884|keratin 33B##BC009971|KRT33B|3884|keratin 33B##NM_021013|KRT34|3885|keratin 34##BC041070|KRT34|3885|keratin 34	0.125727	
chrX	10584114	10584231	reg1018822.p1	7.346	+	AF035360 NM_001193277 AY112903	-39268	-	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	-48613	-	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	-459118	+	AF230976 AF230977 Y13667 AK226104 AK315095 BC053626 AK291215 TSC_hg19_v1_chrX_-_10588583 AY112901 AK297205 NM_000381 NM_033289	4393	-	AF041206 NM_001098624 AK299061	61584	-	NM_033290	267636	-	AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112903|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##AF230976|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF230977|MID1|4281|midline 1 (Opitz/BBB syndrome)##Y13667|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK226104|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK315095|MID1|4281|midline 1 (Opitz/BBB syndrome)##BC053626|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK291215|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112901|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK297205|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_000381|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_033289|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_033290|MID1|4281|midline 1 (Opitz/BBB syndrome)	0.368199	CTCF.p2:-4:0.368
chr12	95104832	95104970	reg1018008.p2	7.345	+	EU831778 EU831856 BC040535 NM_020698	-60637	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-251169	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-251259	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	292569	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	292615	-	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	362397	-	EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	0.93045	CTCF.p2:-12:0.930
chr3	98376429	98376549	reg1018627.p2	7.345	+	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	-64070	-	AK313375 BC101779 BC101781 BC069437 CU686810 NM_005290	-125680	+	TSC_hg19_v1_chr3_-_98241835 NM_001040181 NM_001040182 NM_001040183 NM_001040199 NM_001040200 NM_019895	-134623	-	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	74756	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	75098	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	244003	-	AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AK313375|GPR15|2838|G protein-coupled receptor 15##BC101779|GPR15|2838|G protein-coupled receptor 15##BC101781|GPR15|2838|G protein-coupled receptor 15##BC069437|GPR15|2838|G protein-coupled receptor 15##NM_005290|GPR15|2838|G protein-coupled receptor 15##NM_001040181|CLDND1|56650|claudin domain containing 1##NM_001040182|CLDND1|56650|claudin domain containing 1##NM_001040183|CLDND1|56650|claudin domain containing 1##NM_001040199|CLDND1|56650|claudin domain containing 1##NM_001040200|CLDND1|56650|claudin domain containing 1##NM_019895|CLDND1|56650|claudin domain containing 1##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2	0.103887	
chr2	146510176	146510283	reg1019160.p1	7.343	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-1232308	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-1232598	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-1235026	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	2091888	+	TSC_hg19_v1_chr2_+_148602300 AK314124	2092106	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	2092416	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.311496	CTCF.p2:11:0.311
chr2	209119151	209119262	reg1019986.p1	7.343	+	BC035737 NM_001099334	-64434	-	EF426311 NM_014617 BC114456	-90880	-	BC074944 BC074945 BC117384 BC117388 NM_005210	-108330	-	AF113917 TSC_hg19_v1_chr2_-_209119796 BC021046 AL136702 BC093020 AF020038 NM_005896 AK302105 AK312242	607	-	TSC_hg19_v1_chr2_+_209131009 AY457063 BC017736 BC032389 NM_001178000 NM_015040 NM_152671 BC125052 BC125053	11790	+	TSC_hg19_v1_chr2_+_209131083 AK127769	11877	+	BC035737|C2orf80|389073|chromosome 2 open reading frame 80##NM_001099334|C2orf80|389073|chromosome 2 open reading frame 80##EF426311|CRYGA|1418|crystallin, gamma A##NM_014617|CRYGA|1418|crystallin, gamma A##BC114456|CRYGA|1418|crystallin, gamma A##BC074944|CRYGB|1419|crystallin, gamma B##BC074945|CRYGB|1419|crystallin, gamma B##BC117384|CRYGB|1419|crystallin, gamma B##BC117388|CRYGB|1419|crystallin, gamma B##NM_005210|CRYGB|1419|crystallin, gamma B##AF113917|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##BC021046|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AL136702|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##BC093020|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AF020038|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##NM_005896|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AK302105|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AK312242|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AY457063|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC017736|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC032389|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001178000|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_015040|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_152671|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC125052|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC125053|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing	0.623	CTCF.p2:-24:0.623
chr8	108825774	108825910	reg1019508.p1	7.343	+	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	-315654	-	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	-1043398	-	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	-1087487	+	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	270032	-	AB527268 CR457029 CR542275 CU674376 CU677689 CU678957 DQ892278 DQ895478 BC000734 TSC_hg19_v1_chr8_-_109260938 U54562 U85947	435092	-	TSC_hg19_v1_chr8_-_109260947 BC017887 AK313186 BC005944 BC016706 BC021679 U94175 U62962 BC008419 NM_001568 AK310902	435143	-	U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1##AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2##CR457029|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR542275|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ892278|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ895478|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC000734|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U54562|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U85947|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC017887|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK313186|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC005944|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC016706|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC021679|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U94175|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U62962|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC008419|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##NM_001568|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK310902|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E	0.975298	CTCF.p2:-20:0.975
chr12	120773384	120773492	reg1016355.p1	7.342	+	AB464016 EU832774 GQ129318 AK311830 BC005386 BC013384 BC106725 BC106726 M21054 NM_000928	-7865	-	NM_012240 TSC_hg19_v1_chr12_+_120740123 BC034736 AF083109 BC109319 BC109320	-33296	+	TSC_hg19_v1_chr12_-_120703574 NM_001080855 NM_001243756 NM_002859	-69848	-	AB463899 AB012851 NM_002442 TSC_hg19_v1_chr12_-_120806968	33498	-	TSC_hg19_v1_chr12_+_120875920 AK312009 NM_004373 BC107861 BC070186 BC007723 DQ893099 DQ896371	102472	+	U75688 DQ893091 DQ896363 AF161481 AK312006 BC055313 BC002638 NM_016399	110751	-	EU832774|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##GQ129318|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##AK311830|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC005386|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC013384|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106725|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106726|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##M21054|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##NM_000928|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##NM_012240|SIRT4|23409|sirtuin 4##BC034736|SIRT4|23409|sirtuin 4##AF083109|SIRT4|23409|sirtuin 4##BC109319|SIRT4|23409|sirtuin 4##BC109320|SIRT4|23409|sirtuin 4##NM_001080855|PXN|5829|paxillin##NM_001243756|PXN|5829|paxillin##NM_002859|PXN|5829|paxillin##AB012851|MSI1|4440|musashi homolog 1 (Drosophila)##NM_002442|MSI1|4440|musashi homolog 1 (Drosophila)##AK312009|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##NM_004373|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC107861|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC070186|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC007723|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ893099|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ896371|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##U75688|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ893091|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ896363|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AF161481|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AK312006|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC055313|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC002638|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##NM_016399|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1	0.830069	CTCF.p2:-20:0.830
chr2	196996209	196996346	reg1018400.p2	7.342	+	AB463018 AF327442 AK094515 NM_018897 AB023161	-62782	-	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	-474369	+	BC029413 NM_001127257 CR749813	-474702	+	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	40002	-	TSC_hg19_v1_chr2_-_197036310 NM_004226	40041	-	BC117194 BC117198 AB037722 NM_020760	461015	-	AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##NM_004226|STK17B|9262|serine/threonine kinase 17b##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2	0.985301	CTCF.p2:-26:0.985
chr9	21213796	21213931	reg1017996.p1	7.342	+	BC069409 BC103972 BC103973 NM_002171 V00551	-6722	-	BC074991 BC074992 BC113994 BC114000 M34913 NM_021057	-11661	-	AB590745 HQ258102 HQ258746 BC074965 BC074966 BC113640 BC113642 NM_021068 M27318	-26264	-	AB463792 M28585 NM_002173 X00140	3443	-	M71246 BC096732 BC098355 M11026 NM_021268 M38289	14359	-	BC104159 BC104160 BC074956 NM_002172 V00542	26119	-	BC069409|IFNA10|3446|interferon, alpha 10##BC103972|IFNA10|3446|interferon, alpha 10##BC103973|IFNA10|3446|interferon, alpha 10##NM_002171|IFNA10|3446|interferon, alpha 10##V00551|IFNA10|3446|interferon, alpha 10##BC074991|IFNA7|3444|interferon, alpha 7##BC074992|IFNA7|3444|interferon, alpha 7##BC113994|IFNA7|3444|interferon, alpha 7##BC114000|IFNA7|3444|interferon, alpha 7##M34913|IFNA7|3444|interferon, alpha 7##NM_021057|IFNA7|3444|interferon, alpha 7##HQ258102|IFNA4|3441|interferon, alpha 4##HQ258746|IFNA4|3441|interferon, alpha 4##BC074965|IFNA4|3441|interferon, alpha 4##BC074966|IFNA4|3441|interferon, alpha 4##BC113640|IFNA4|3441|interferon, alpha 4##BC113642|IFNA4|3441|interferon, alpha 4##NM_021068|IFNA4|3441|interferon, alpha 4##M27318|IFNA4|3441|interferon, alpha 4##M28585|IFNA16|3449|interferon, alpha 16##NM_002173|IFNA16|3449|interferon, alpha 16##X00140|IFNA16|3449|interferon, alpha 16##M71246|IFNA17|3451|interferon, alpha 17##BC096732|IFNA17|3451|interferon, alpha 17##BC098355|IFNA17|3451|interferon, alpha 17##M11026|IFNA17|3451|interferon, alpha 17##NM_021268|IFNA17|3451|interferon, alpha 17##M38289|IFNA17|3451|interferon, alpha 17##BC104159|IFNA14|3448|interferon, alpha 14##BC104160|IFNA14|3448|interferon, alpha 14##BC074956|IFNA14|3448|interferon, alpha 14##NM_002172|IFNA14|3448|interferon, alpha 14##V00542|IFNA14|3448|interferon, alpha 14	0.0	
chr4	114016038	114016150	reg1016645.p1	7.341	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	-45260	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-276793	+	NM_015454 TSC_hg19_v1_chr4_+_113558677	-457426	+	TSC_hg19_v1_chr4_+_114214102 AK294720	198025	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	666187	-	TSC_hg19_v1_chr4_-_114682341 AK294517	666262	-	NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7##AK294720|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK294517|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.029158	
chr11	129862419	129862521	reg1017466.p1	7.340	+	AB033057 AB385439 BC117415 BC143612 BC143613 AF503171 AF275817 NM_199438 NM_199439	-45062	-	TSC_hg19_v1_chr11_-_129765482 NM_001143835	-96989	-	TSC_hg19_v1_chr11_-_129765469 AK299794	-97000	-	AK310354 TSC_hg19_v1_chr11_-_129872691	10219	-	TSC_hg19_v1_chr11_-_129872731 BC112934 AL833172 BX648944 NM_020228 NM_199437	10264	-	TSC_hg19_v1_chr11_+_129939755 NM_001142276 NM_001142277 NM_001142278 NM_001642	77244	+	AB033057|PRDM10|56980|PR domain containing 10##BC117415|PRDM10|56980|PR domain containing 10##BC143612|PRDM10|56980|PR domain containing 10##BC143613|PRDM10|56980|PR domain containing 10##AF503171|PRDM10|56980|PR domain containing 10##AF275817|PRDM10|56980|PR domain containing 10##NM_199438|PRDM10|56980|PR domain containing 10##NM_199439|PRDM10|56980|PR domain containing 10##NM_001143835|NFRKB|4798|nuclear factor related to kappaB binding protein##AK310354|PRDM10|56980|PR domain containing 10##BC112934|PRDM10|56980|PR domain containing 10##AL833172|PRDM10|56980|PR domain containing 10##BX648944|PRDM10|56980|PR domain containing 10##NM_020228|PRDM10|56980|PR domain containing 10##NM_199437|PRDM10|56980|PR domain containing 10##NM_001142276|APLP2|334|amyloid beta (A4) precursor-like protein 2##NM_001142277|APLP2|334|amyloid beta (A4) precursor-like protein 2##NM_001142278|APLP2|334|amyloid beta (A4) precursor-like protein 2##NM_001642|APLP2|334|amyloid beta (A4) precursor-like protein 2	0.508822	CTCF.p2:-6:0.379
chr12	27168740	27168877	reg1017637.p2	7.340	+	TSC_hg19_v1_chr12_-_27167332 NM_016551	-1473	-	TSC_hg19_v1_chr12_-_27167318 AK023085	-1487	-	TSC_hg19_v1_chr12_-_27167274 AK002031 AB032470 BC005176	-1650	-	AK309064 BC008380 NM_004264 TSC_hg19_v1_chr12_+_27175482	6674	+	TSC_hg19_v1_chr12_+_27175501 U46837 U52960 AB463863 EU446930 AK311838 CR456999	6707	+	NM_001080406	66646	-	NM_016551|TM7SF3|51768|transmembrane 7 superfamily member 3##AK023085|TM7SF3|51768|transmembrane 7 superfamily member 3##AK002031|TM7SF3|51768|transmembrane 7 superfamily member 3##AB032470|TM7SF3|51768|transmembrane 7 superfamily member 3##BC005176|TM7SF3|51768|transmembrane 7 superfamily member 3##AK309064|MED21|9412|mediator complex subunit 21##BC008380|MED21|9412|mediator complex subunit 21##NM_004264|MED21|9412|mediator complex subunit 21##U46837|MED21|9412|mediator complex subunit 21##U52960|MED21|9412|mediator complex subunit 21##EU446930|MED21|9412|mediator complex subunit 21##AK311838|MED21|9412|mediator complex subunit 21##CR456999|MED21|9412|mediator complex subunit 21##NM_001080406|C12orf71|728858|chromosome 12 open reading frame 71	0.529858	CTCF.p2:6:0.530
chr17	32352336	32352471	reg1021256.p1	7.340	+	AL834182 NM_183377	-732398	-	AF216311 NM_173847 BC100886 BC100887	-1033501	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-1097200	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	131284	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	229928	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	244870	+	AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7	0.272937	CTCF.p2:8:0.273
chr10	130062309	130062415	reg1019675.p1	7.339	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-137834	-	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	-216508	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-356907	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	1203109	+	TSC_hg19_v1_chr10_+_131265507 BC000824	1203152	+	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	1699691	-	NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3	0.980797	CTCF.p2:-2:0.981
chr12	45206014	45206124	reg1018126.p2	7.339	+	TSC_hg19_v1_chr12_+_44229883 BC042192 BC060798 AK057287 BC030284 AL136855 NM_032256	-976163	+	AK127868 BT019691 CR541736 CR541761 AB209302 AB384914 TSC_hg19_v1_chr12_-_44200120 AK291223 BC022491 BC022344 U02680 BC068548 EU832120 EU832214 AK297206 BC043148 NM_001242397 NM_002822	-1005957	-	TSC_hg19_v1_chr12_+_44152777 BC013316 AY340962 AY340963 AY340964 AY340965 AY340966 AY340967 AF155118 AK000528	-1053290	+	D89629 AK315960 AK299277 NM_001145109	63322	-	BC020544 TSC_hg19_v1_chr12_-_45269991	63908	-	TSC_hg19_v1_chr12_-_45270099 AK056082 AK297521 AK309825 D83018	64036	-	BC042192|TMEM117|84216|transmembrane protein 117##BC060798|TMEM117|84216|transmembrane protein 117##AK057287|TMEM117|84216|transmembrane protein 117##BC030284|TMEM117|84216|transmembrane protein 117##AL136855|TMEM117|84216|transmembrane protein 117##NM_032256|TMEM117|84216|transmembrane protein 117##AK127868|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BT019691|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541736|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541761|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AB209302|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK291223|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022491|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022344|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##U02680|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC068548|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832120|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832214|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK297206|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC043148|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_001242397|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_002822|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC013316|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340962|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340963|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340964|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340965|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340966|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340967|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AF155118|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK000528|IRAK4|51135|interleukin-1 receptor-associated kinase 4##D89629|NELL2|4753|NEL-like 2 (chicken)##AK315960|NELL2|4753|NEL-like 2 (chicken)##AK299277|NELL2|4753|NEL-like 2 (chicken)##NM_001145109|NELL2|4753|NEL-like 2 (chicken)##BC020544|NELL2|4753|NEL-like 2 (chicken)##AK056082|NELL2|4753|NEL-like 2 (chicken)##AK297521|NELL2|4753|NEL-like 2 (chicken)##AK309825|NELL2|4753|NEL-like 2 (chicken)##D83018|NELL2|4753|NEL-like 2 (chicken)	0.0	
chr2	20526065	20526160	reg1018374.p1	7.339	+	AF272350 TSC_hg19_v1_chr2_-_20512079	-14063	-	TSC_hg19_v1_chr2_-_20425168 NM_001006946	-100933	-	X60306 AB464260 CU679093 DQ893265 DQ896595 TSC_hg19_v1_chr2_-_20424892 AK299385 J05392 AK313974 AK222739 BC008765 AJ551176 AK311409 NM_002997	-101325	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	1021	-	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	24307	-	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	120720	+	AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_001006946|SDC1|6382|syndecan 1##X60306|SDC1|6382|syndecan 1##DQ893265|SDC1|6382|syndecan 1##DQ896595|SDC1|6382|syndecan 1##AK299385|SDC1|6382|syndecan 1##J05392|SDC1|6382|syndecan 1##AK313974|SDC1|6382|syndecan 1##AK222739|SDC1|6382|syndecan 1##BC008765|SDC1|6382|syndecan 1##AJ551176|SDC1|6382|syndecan 1##NM_002997|SDC1|6382|syndecan 1##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B	0.998666	CTCF.p2:-3:0.999
chr7	100091083	100091189	reg1017558.p1	7.339	+	AK124773 NM_173564	-9587	+	BC001966 BC031622 AK314824 TSC_hg19_v1_chr7_-_100076802 BC002972 BC010406 AK296580 AK297702 AK310800 BC001486 NM_030935	-14309	-	BC031966 NM_001004323	-29243	-	TSC_hg19_v1_chr7_+_100136826 NM_006076 BC009393	45675	+	TSC_hg19_v1_chr7_+_100136847 AK314954 BC017329 AB527774 CU675942	45771	+	NM_001168682	80133	-	AK124773|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_173564|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##BC001966|TSC22D4|81628|TSC22 domain family, member 4##BC031622|TSC22D4|81628|TSC22 domain family, member 4##AK314824|TSC22D4|81628|TSC22 domain family, member 4##BC002972|TSC22D4|81628|TSC22 domain family, member 4##BC010406|TSC22D4|81628|TSC22 domain family, member 4##AK296580|TSC22D4|81628|TSC22 domain family, member 4##AK297702|TSC22D4|81628|TSC22 domain family, member 4##BC001486|TSC22D4|81628|TSC22 domain family, member 4##NM_030935|TSC22D4|81628|TSC22 domain family, member 4##BC031966|C7orf61|402573|chromosome 7 open reading frame 61##NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61##NM_006076|AGFG2|3268|ArfGAP with FG repeats 2##BC009393|AGFG2|3268|ArfGAP with FG repeats 2##AK314954|AGFG2|3268|ArfGAP with FG repeats 2##BC017329|AGFG2|3268|ArfGAP with FG repeats 2##NM_001168682|SAP25|100316904|Sin3A-associated protein, 25kDa	0.165952	
chr9	115683900	115683999	reg1019020.p2	7.339	+	CU690566 BC048285 AK314414 AK055571 AF242557 NM_033051	-30873	-	TSC_hg19_v1_chr9_+_115631819 AK129991	-52084	+	TSC_hg19_v1_chr9_+_115513056 NM_001012994	-170858	+	AK095843 NM_001101338	90522	-	AK301275 HQ258583 AF022158 NM_003408 BC126390 BC144145	135053	-	TSC_hg19_v1_chr9_+_115913250 NM_001860	229292	+	BC048285|SLC46A2|57864|solute carrier family 46, member 2##AK314414|SLC46A2|57864|solute carrier family 46, member 2##AK055571|SLC46A2|57864|solute carrier family 46, member 2##AF242557|SLC46A2|57864|solute carrier family 46, member 2##NM_033051|SLC46A2|57864|solute carrier family 46, member 2##AK129991|SNX30|401548|sorting nexin family member 30##NM_001012994|SNX30|401548|sorting nexin family member 30##AK095843|ZNF883|169834|zinc finger protein 883##NM_001101338|ZNF883|169834|zinc finger protein 883##AK301275|ZFP37|7539|zinc finger protein 37 homolog (mouse)##HQ258583|ZFP37|7539|zinc finger protein 37 homolog (mouse)##AF022158|ZFP37|7539|zinc finger protein 37 homolog (mouse)##NM_003408|ZFP37|7539|zinc finger protein 37 homolog (mouse)##BC126390|ZFP37|7539|zinc finger protein 37 homolog (mouse)##BC144145|ZFP37|7539|zinc finger protein 37 homolog (mouse)##NM_001860|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2	0.722488	CTCF.p2:1:0.722
chr10	44381448	44381537	reg1017437.p1	7.337	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-237186	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-237287	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-279595	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	499007	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	1025226	+	AK056518 TSC_hg19_v1_chr10_-_45455156	1073655	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.617492	CTCF.p2:-11:0.601
chr2	128113129	128113249	reg1018288.p1	7.337	+	AF234262 AF239798 BC136293 AF111105 NM_006609	-12451	-	TSC_hg19_v1_chr2_-_128051744 M31899 NM_000122	-61436	-	TSC_hg19_v1_chr2_-_128051743 AK307338 AK222465 BC008820 AK300250	-61468	-	TSC_hg19_v1_chr2_+_128176007 NM_000312 AK298449 AK303773 AK298280 AK298454 X02750	62813	+	TSC_hg19_v1_chr2_+_128176019 BC034377	62837	+	BC065279 BC110536 BC110537 TSC_hg19_v1_chr2_-_128284054 AK000868 AL834178 AK296848 AK027561 AK295970 AK309006 AK056881 AK294669 NM_017969	170776	-	AF239798|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##BC136293|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##AF111105|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##NM_006609|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##M31899|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##NM_000122|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK307338|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK222465|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##BC008820|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK300250|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##NM_000312|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298449|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK303773|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298280|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298454|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##X02750|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##BC034377|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##BC065279|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110536|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110537|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK000868|IWS1|55677|IWS1 homolog (S. cerevisiae)##AL834178|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK296848|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK027561|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK295970|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK309006|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK056881|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK294669|IWS1|55677|IWS1 homolog (S. cerevisiae)##NM_017969|IWS1|55677|IWS1 homolog (S. cerevisiae)	0.385655	CTCF.p2:-8:0.386
chr4	145095671	145095809	reg1020200.p1	7.337	+	AY950614 DQ893046 L07251 L07253 S77893 U00177 U00178 U00179 X57023 M12857 M36281 X51798 BC013328 EU338231 EU338232 EU338233 EU338234 L31860 X08054 BC005319 AK290561 NM_002099	-33895	-	AY509882 AY509883 AY950609 AY950610 AY950611 AY950612 U05255 J02982 BC121077 BC121078 EU338223 EU338224 EU338225 EU338226 EU338227 EU338228 EU338229 EU338230 EU338235 EU338236 EU338237 EU338238 BC069310 X08055 NM_002100	-155273	-	EU176664 BC064396 BC017864 M29610 NM_002102 NM_198682	-269053	-	NM_022475 AY009951 TSC_hg19_v1_chr4_+_145567307 AY009317 BC025311 BC015636 BC009298	471508	+	NM_001040876 NM_002940	923415	+	TSC_hg19_v1_chr4_-_146019349 AF132794 AL080090 BC005217 AB012109 NM_014885	923597	-	AY950614|GYPA|2993|glycophorin A (MNS blood group)##DQ893046|GYPA|2993|glycophorin A (MNS blood group)##L07251|GYPA|2993|glycophorin A (MNS blood group)##L07253|GYPA|2993|glycophorin A (MNS blood group)##U00177|GYPA|2993|glycophorin A (MNS blood group)##U00178|GYPA|2993|glycophorin A (MNS blood group)##U00179|GYPA|2993|glycophorin A (MNS blood group)##X57023|GYPA|2993|glycophorin A (MNS blood group)##M12857|GYPA|2993|glycophorin A (MNS blood group)##M36281|GYPA|2993|glycophorin A (MNS blood group)##X51798|GYPA|2993|glycophorin A (MNS blood group)##BC013328|GYPA|2993|glycophorin A (MNS blood group)##EU338231|GYPA|2993|glycophorin A (MNS blood group)##EU338232|GYPA|2993|glycophorin A (MNS blood group)##EU338233|GYPA|2993|glycophorin A (MNS blood group)##EU338234|GYPA|2993|glycophorin A (MNS blood group)##L31860|GYPA|2993|glycophorin A (MNS blood group)##X08054|GYPA|2993|glycophorin A (MNS blood group)##BC005319|GYPA|2993|glycophorin A (MNS blood group)##AK290561|GYPA|2993|glycophorin A (MNS blood group)##NM_002099|GYPA|2993|glycophorin A (MNS blood group)##AY509882|GYPB|2994|glycophorin B (MNS blood group)##AY509883|GYPB|2994|glycophorin B (MNS blood group)##AY950609|GYPB|2994|glycophorin B (MNS blood group)##AY950610|GYPB|2994|glycophorin B (MNS blood group)##AY950611|GYPB|2994|glycophorin B (MNS blood group)##U05255|GYPB|2994|glycophorin B (MNS blood group)##J02982|GYPB|2994|glycophorin B (MNS blood group)##BC121077|GYPB|2994|glycophorin B (MNS blood group)##BC121078|GYPB|2994|glycophorin B (MNS blood group)##EU338223|GYPB|2994|glycophorin B (MNS blood group)##EU338224|GYPB|2994|glycophorin B (MNS blood group)##EU338225|GYPB|2994|glycophorin B (MNS blood group)##EU338226|GYPB|2994|glycophorin B (MNS blood group)##EU338227|GYPB|2994|glycophorin B (MNS blood group)##EU338228|GYPB|2994|glycophorin B (MNS blood group)##EU338229|GYPB|2994|glycophorin B (MNS blood group)##EU338230|GYPB|2994|glycophorin B (MNS blood group)##EU338235|GYPB|2994|glycophorin B (MNS blood group)##EU338236|GYPB|2994|glycophorin B (MNS blood group)##EU338237|GYPB|2994|glycophorin B (MNS blood group)##EU338238|GYPB|2994|glycophorin B (MNS blood group)##BC069310|GYPB|2994|glycophorin B (MNS blood group)##X08055|GYPB|2994|glycophorin B (MNS blood group)##NM_002100|GYPB|2994|glycophorin B (MNS blood group)##EU176664|GYPE|2996|glycophorin E (MNS blood group)##BC064396|GYPE|2996|glycophorin E (MNS blood group)##BC017864|GYPE|2996|glycophorin E (MNS blood group)##M29610|GYPE|2996|glycophorin E (MNS blood group)##NM_002102|GYPE|2996|glycophorin E (MNS blood group)##NM_198682|GYPE|2996|glycophorin E (MNS blood group)##NM_022475|HHIP|64399|hedgehog interacting protein##AY009951|HHIP|64399|hedgehog interacting protein##AY009317|HHIP|64399|hedgehog interacting protein##BC025311|HHIP|64399|hedgehog interacting protein##BC015636|HHIP|64399|hedgehog interacting protein##BC009298|HHIP|64399|hedgehog interacting protein##NM_001040876|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##NM_002940|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##AF132794|ANAPC10|10393|anaphase promoting complex subunit 10##AL080090|ANAPC10|10393|anaphase promoting complex subunit 10##BC005217|ANAPC10|10393|anaphase promoting complex subunit 10##AB012109|ANAPC10|10393|anaphase promoting complex subunit 10##NM_014885|ANAPC10|10393|anaphase promoting complex subunit 10	0.333508	CTCF.p2:-25:0.334
chr8	42949038	42949183	reg1001771.p3	7.337	+	AK027009 TSC_hg19_v1_chr8_+_42948660	-443	+	TSC_hg19_v1_chr8_+_42948657 NM_032237	-457	+	TSC_hg19_v1_chr8_+_42911465 NM_002027 BC037295 AK292121 L00634 BC084566 L10413 AB590505 BT009854 BC017029	-37642	+	TSC_hg19_v1_chr8_+_42995606 NM_152419	46470	+	TSC_hg19_v1_chr8_+_42995639 AK304441	46523	+	TSC_hg19_v1_chr8_+_42995654 BC042037	46537	+	NM_032237|SGK196|84197|protein kinase-like protein SgK196##NM_002027|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC037295|FNTA|2339|farnesyltransferase, CAAX box, alpha##AK292121|FNTA|2339|farnesyltransferase, CAAX box, alpha##L00634|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC084566|FNTA|2339|farnesyltransferase, CAAX box, alpha##L10413|FNTA|2339|farnesyltransferase, CAAX box, alpha##BT009854|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC017029|FNTA|2339|farnesyltransferase, CAAX box, alpha##NM_152419|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase	0.0	
chr14	102459210	102459356	reg1018748.p1	7.336	+	TSC_hg19_v1_chr14_+_102430909 AB002323 AB527134	-28322	+	TSC_hg19_v1_chr14_+_102430876 AB290157 NM_001376 AK299878	-28455	+	AB451341 CU677587 D26445 AB463199 L42375 TSC_hg19_v1_chr14_+_102276338	-182974	+	TSC_hg19_v1_chr14_-_102553382 AJ890083 X07270 BC017233 BC001695 AK129557 AK291115 AK291607 AK300126 AK310595 BC121062 X15183	94081	-	TSC_hg19_v1_chr14_-_102553513 NM_005348	94223	-	TSC_hg19_v1_chr14_-_102606024 BX248761 AJ890082 AK056446 NM_001017963	146756	-	AB002323|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AB290157|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##NM_001376|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AK299878|DYNC1H1|1778|dynein, cytoplasmic 1, heavy chain 1##AB451341|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##D26445|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##L42375|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AJ890083|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##X07270|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC017233|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC001695|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK129557|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK291115|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK291607|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK300126|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK310595|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BC121062|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##X15183|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##NM_005348|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##BX248761|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AJ890082|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##AK056446|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1##NM_001017963|HSP90AA1|3320|heat shock protein 90kDa alpha (cytosolic), class A member 1	0.49674	CTCF.p2:31:0.497
chr2	10849570	10849704	reg1020990.p1	7.336	+	TSC_hg19_v1_chr2_-_10830102 NM_024894	-19518	-	CU675005 TSC_hg19_v1_chr2_-_10830078 AK290680 AK024000 BC005125 AK024137 AK297169 AK299617	-19593	-	TSC_hg19_v1_chr2_-_10588453 AK301956 NM_002539	-261185	-	TSC_hg19_v1_chr2_+_10861755 NM_001039362 NM_144583 AK292952	12138	+	TSC_hg19_v1_chr2_-_10942759 AK225496 U79278	93067	-	TSC_hg19_v1_chr2_-_10952851 DQ891186 DQ894369 AK289428	103191	-	NM_024894|NOL10|79954|nucleolar protein 10##AK290680|NOL10|79954|nucleolar protein 10##AK024000|NOL10|79954|nucleolar protein 10##BC005125|NOL10|79954|nucleolar protein 10##AK024137|NOL10|79954|nucleolar protein 10##AK297169|NOL10|79954|nucleolar protein 10##AK299617|NOL10|79954|nucleolar protein 10##AK301956|ODC1|4953|ornithine decarboxylase 1##NM_002539|ODC1|4953|ornithine decarboxylase 1##NM_001039362|ATP6V1C2|245973|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2##NM_144583|ATP6V1C2|245973|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2##AK292952|ATP6V1C2|245973|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2##AK225496|PDIA6|10130|protein disulfide isomerase family A, member 6##U79278|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6##AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6	0.55257	CTCF.p2:9:0.553
chr6	157505497	157505612	reg1015795.p1	7.336	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-405679	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-406270	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-406329	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	239030	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	239663	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	296985	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	0.826235	CTCF.p2:10:0.826
chr7	102234532	102234673	reg1020855.p1	7.336	+	AF468111 BC110985 TSC_hg19_v1_chr7_-_102213031 AB209398 BC141857 AK309487 NM_001097615	-21562	-	AJ277739 AJ277740 AJ277741 AB384935 BC056864 BC071870 TSC_hg19_v1_chr7_-_102212997 BC044209 BC050598	-21615	-	AK302217 NM_001031618 NM_001166339	-42924	+	HQ258652 BC110873 TSC_hg19_v1_chr7_-_102257170 AB011110 BC113663 BC143584 BC143585 AK308653	22555	-	TSC_hg19_v1_chr7_-_102257205 AK026441 AK310176 NM_001079877 NM_006989 AY029206	22622	-	EU341824 NM_001114403 AK296589	48674	-	AF468111|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AB209398|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_001097615|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277739|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AJ277740|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277741|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##HQ258652|RASA4|10156|RAS p21 protein activator 4##BC110873|RASA4|10156|RAS p21 protein activator 4##AB011110|RASA4|10156|RAS p21 protein activator 4##BC113663|RASA4|10156|RAS p21 protein activator 4##BC143584|RASA4|10156|RAS p21 protein activator 4##BC143585|RASA4|10156|RAS p21 protein activator 4##AK308653|RASA4|10156|RAS p21 protein activator 4##AK026441|RASA4|10156|RAS p21 protein activator 4##AK310176|RASA4|10156|RAS p21 protein activator 4##NM_001079877|RASA4|10156|RAS p21 protein activator 4##NM_006989|RASA4|10156|RAS p21 protein activator 4##EU341824|UPK3BL|100134938|uroplakin 3B-like##NM_001114403|UPK3BL|100134938|uroplakin 3B-like	0.155716	
chr11	6776693	6776847	reg1019067.p2	7.335	+	TSC_hg19_v1_chr11_-_6704541 CR457177 DQ891581 DQ894774 DQ895036 AB463889 BC012306 AK026857 AF164797 AF141338 NM_022061	-72196	-	TSC_hg19_v1_chr11_-_6676982 AB053446 NM_003737	-99807	-	TSC_hg19_v1_chr11_-_6643809 BC038382	-132909	-	NM_001004490 BC140734	13466	-	BC151143 NM_001004489	29477	+	BC101489 BC101491 NM_003696	40305	-	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17##DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17##DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17##DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17##BC012306|MRPL17|63875|mitochondrial ribosomal protein L17##AK026857|MRPL17|63875|mitochondrial ribosomal protein L17##AF164797|MRPL17|63875|mitochondrial ribosomal protein L17##AF141338|MRPL17|63875|mitochondrial ribosomal protein L17##NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17##AB053446|DCHS1|8642|dachsous 1 (Drosophila)##NM_003737|DCHS1|8642|dachsous 1 (Drosophila)##BC038382|DCHS1|8642|dachsous 1 (Drosophila)##NM_001004490|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC140734|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC151143|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##NM_001004489|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	0.905777	CTCF.p2:0:0.906
chr1	232002548	232002683	reg1021919.p1	7.335	+	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	-240060	+	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	-338184	+	AF229245 NM_022051	-441826	-	BC006013 NM_020808 AY168879	648654	-	TSC_hg19_v1_chr1_-_232878472 AK093200	875842	-	NM_019090 BC109122	938089	+	AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1##FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)##NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)##BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_019090|KIAA1383|54627|KIAA1383##BC109122|KIAA1383|54627|KIAA1383	1.057592	CTCF.p2:-14:0.985
chr19	6552175	6552328	reg1015994.p2	7.335	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	-21225	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-49934	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-70468	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	38781	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	38855	-	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	38907	-	NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule	0.104231	
chr3	107460253	107460364	reg1018855.p1	7.335	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-218459	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-363998	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-500716	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	349565	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	480984	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	555093	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.51394	CTCF.p2:31:0.514
chr17	27472499	27472621	reg1018906.p1	7.334	+	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	-5149	-	AK054958 NM_004740	-69934	-	TSC_hg19_v1_chr17_-_27401793 BC131561 BC047669	-70702	-	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	34790	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	101317	+	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	148550	-	AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC131561|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC047669|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2	0.0	
chr12	7341214	7341300	reg1019676.p1	7.333	+	TSC_hg19_v1_chr12_+_7282990 AK316059 NM_014718 AJ277460 BC111491 AK299177 BC104767 BC112283 AB527393 BC148258	-58133	+	DQ892613 DQ895853 AY007436 AF212239 NM_031491 AK311977 AK096947 AK223378 BC029355	-59827	-	BC128428 AF178985 TSC_hg19_v1_chr12_-_7261802 AK222802 BC062428 AK314299 AK024084 NM_016546	-79429	-	AK292256 NM_001131026	501	+	TSC_hg19_v1_chr12_+_7342306 Z48054 AK299105 NM_001131023 NM_001131024 NM_001131025 AK302742 AK225126 AK312317 AK316250 AK303515	1097	+	BC010621 X84899 NM_000319 U19721 AB527550 DQ891142 DQ894321 CU679763	1707	+	AK316059|CLSTN3|9746|calsyntenin 3##NM_014718|CLSTN3|9746|calsyntenin 3##AJ277460|CLSTN3|9746|calsyntenin 3##BC111491|CLSTN3|9746|calsyntenin 3##AK299177|CLSTN3|9746|calsyntenin 3##BC104767|CLSTN3|9746|calsyntenin 3##BC112283|CLSTN3|9746|calsyntenin 3##BC148258|CLSTN3|9746|calsyntenin 3##DQ892613|RBP5|83758|retinol binding protein 5, cellular##DQ895853|RBP5|83758|retinol binding protein 5, cellular##AY007436|RBP5|83758|retinol binding protein 5, cellular##AF212239|RBP5|83758|retinol binding protein 5, cellular##NM_031491|RBP5|83758|retinol binding protein 5, cellular##AK311977|RBP5|83758|retinol binding protein 5, cellular##AK096947|RBP5|83758|retinol binding protein 5, cellular##AK223378|RBP5|83758|retinol binding protein 5, cellular##BC029355|RBP5|83758|retinol binding protein 5, cellular##AF178985|C1RL|51279|complement component 1, r subcomponent-like##AK222802|C1RL|51279|complement component 1, r subcomponent-like##BC062428|C1RL|51279|complement component 1, r subcomponent-like##AK314299|C1RL|51279|complement component 1, r subcomponent-like##AK024084|C1RL|51279|complement component 1, r subcomponent-like##NM_016546|C1RL|51279|complement component 1, r subcomponent-like##AK292256|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131026|PEX5|5830|peroxisomal biogenesis factor 5##Z48054|PEX5|5830|peroxisomal biogenesis factor 5##AK299105|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131023|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131024|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131025|PEX5|5830|peroxisomal biogenesis factor 5##AK302742|PEX5|5830|peroxisomal biogenesis factor 5##AK225126|PEX5|5830|peroxisomal biogenesis factor 5##AK312317|PEX5|5830|peroxisomal biogenesis factor 5##AK316250|PEX5|5830|peroxisomal biogenesis factor 5##AK303515|PEX5|5830|peroxisomal biogenesis factor 5##BC010621|PEX5|5830|peroxisomal biogenesis factor 5##X84899|PEX5|5830|peroxisomal biogenesis factor 5##NM_000319|PEX5|5830|peroxisomal biogenesis factor 5##U19721|PEX5|5830|peroxisomal biogenesis factor 5##DQ891142|PEX5|5830|peroxisomal biogenesis factor 5##DQ894321|PEX5|5830|peroxisomal biogenesis factor 5	0.916728	CTCF.p2:2:0.917
chr3	107148868	107148973	reg1019183.p1	7.333	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-52610	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-189328	+	TSC_hg19_v1_chr3_-_106959482 BC036229	-189441	-	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	92929	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	660953	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	792372	-	AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)	0.66212	CTCF.p2:9:0.662
chr6	147827879	147827995	reg1018771.p1	7.333	+	TSC_hg19_v1_chr6_+_147527118 AK128121	-300827	+	NM_001127715 NM_139244 AL834152 BC107737 BC113382 BC113408	-302381	+	TSC_hg19_v1_chr6_+_147524880 BC043645	-303063	+	TSC_hg19_v1_chr6_+_147829825 NM_001030060	1882	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	835826	+	TSC_hg19_v1_chr6_+_148663973 AB018333	836053	+	AK128121|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001127715|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_139244|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AL834152|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC107737|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113382|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113408|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC043645|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001030060|SAMD5|389432|sterile alpha motif domain containing 5##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1	0.649628	CTCF.p2:-9:0.650
chr6	25602731	25602857	reg1021761.p1	7.333	+	TSC_hg19_v1_chr6_-_25571218 Y10205	-31536	-	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	-322900	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	-323136	+	AK289477 NM_006998 BC000336 BC003036 Y16752	49629	+	CU687518 BC062211 NM_170745	123977	-	AK312055 AB590704 BC066238 BC066239 BC066240 BC066241 BC066242 BC066243 NM_170610	124276	+	BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##AK289477|SCGN|10590|secretagogin, EF-hand calcium binding protein##NM_006998|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC000336|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC003036|SCGN|10590|secretagogin, EF-hand calcium binding protein##Y16752|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC062211|HIST1H2AA|221613|histone cluster 1, H2aa##NM_170745|HIST1H2AA|221613|histone cluster 1, H2aa##AK312055|HIST1H2BA|255626|histone cluster 1, H2ba##BC066238|HIST1H2BA|255626|histone cluster 1, H2ba##BC066239|HIST1H2BA|255626|histone cluster 1, H2ba##BC066240|HIST1H2BA|255626|histone cluster 1, H2ba##BC066241|HIST1H2BA|255626|histone cluster 1, H2ba##BC066242|HIST1H2BA|255626|histone cluster 1, H2ba##BC066243|HIST1H2BA|255626|histone cluster 1, H2ba##NM_170610|HIST1H2BA|255626|histone cluster 1, H2ba	0.983916	CTCF.p2:12:0.984
chr7	6911549	6911661	reg1019472.p1	7.333	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-45707	-	AK296026 CU679629 AK000993 TSC_hg19_v1_chr7_-_6865849	-45767	-	AK314983 BC034495 NM_001099697 NM_173565	-117866	+	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	310642	+	BC136892 BC144431 AJ890451 NM_001037763	663849	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	694983	+	BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK296026|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK000993|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)	0.740157	CTCF.p2:29:0.740
chr11	118465887	118466005	reg1017838.p1	7.332	+	TSC_hg19_v1_chr11_+_118443146 X81197 BC080638 BC093636 BC093638	-22788	+	TSC_hg19_v1_chr11_+_118443110 NM_001142281 NM_001655 AK304019 AK312298 BC064936 BX640860	-22832	+	TSC_hg19_v1_chr11_-_118436639 AL136934 BC011647 AK289521 AJ249980 BC012802 BC022856 AK025480 NM_001168618 NM_020153	-29250	-	AB094090 NM_015157	11266	+	NM_001144758 NM_001144759 TSC_hg19_v1_chr11_+_118478332 CR749783 BC098586 AB014538 AK295819 AL832373 AK074070 AK125783	12431	+	AK223140 AK309565 AK091981 AK223143 AX747289 BC109206 NM_007180 AB000824	84421	-	X81197|ARCN1|372|archain 1##BC080638|ARCN1|372|archain 1##BC093636|ARCN1|372|archain 1##BC093638|ARCN1|372|archain 1##NM_001142281|ARCN1|372|archain 1##NM_001655|ARCN1|372|archain 1##AK304019|ARCN1|372|archain 1##AK312298|ARCN1|372|archain 1##BC064936|ARCN1|372|archain 1##BX640860|ARCN1|372|archain 1##AL136934|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##BC011647|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##AK289521|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##AJ249980|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##BC012802|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##BC022856|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##AK025480|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##NM_001168618|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##NM_020153|IFT46|56912|intraflagellar transport 46 homolog (Chlamydomonas)##AB094090|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##NM_015157|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##NM_001144758|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##NM_001144759|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##CR749783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##BC098586|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AB014538|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK295819|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AL832373|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK074070|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK125783|PHLDB1|23187|pleckstrin homology-like domain, family B, member 1##AK223140|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK309565|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK091981|TREH|11181|trehalase (brush-border membrane glycoprotein)##AK223143|TREH|11181|trehalase (brush-border membrane glycoprotein)##BC109206|TREH|11181|trehalase (brush-border membrane glycoprotein)##NM_007180|TREH|11181|trehalase (brush-border membrane glycoprotein)##AB000824|TREH|11181|trehalase (brush-border membrane glycoprotein)	0.326544	CTCF.p2:-20:0.327
chr9	33223877	33224004	reg1018172.p1	7.332	+	NM_001497 TSC_hg19_v1_chr9_-_33167361	-56579	-	TSC_hg19_v1_chr9_-_33167335 BC045773	-56614	-	D29805 X13223 X14085 M22921 U10474 TSC_hg19_v1_chr9_-_33167262	-56693	-	TSC_hg19_v1_chr9_+_33240166 AF048700 BC110068 NM_014471	16240	+	AM392568 BC014774 TSC_hg19_v1_chr9_-_33264707 AK096038 AK316577 AF116273 BC002407 AK222749 AF022224 U46917 BC001936 Z35491 NM_001172415 NM_004323	40668	-	NM_001195536 NM_016410 TSC_hg19_v1_chr9_+_33265035 BC016698 BC007457 AK315455 AK024753 BC018603 BC021168 AK295744	41016	+	NM_001497|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##BC045773|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##D29805|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X13223|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X14085|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##M22921|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##U10474|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AF048700|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##BC110068|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##NM_014471|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##AM392568|BAG1|573|BCL2-associated athanogene##BC014774|BAG1|573|BCL2-associated athanogene##AK096038|BAG1|573|BCL2-associated athanogene##AK316577|BAG1|573|BCL2-associated athanogene##AF116273|BAG1|573|BCL2-associated athanogene##AK222749|BAG1|573|BCL2-associated athanogene##AF022224|BAG1|573|BCL2-associated athanogene##U46917|BAG1|573|BCL2-associated athanogene##BC001936|BAG1|573|BCL2-associated athanogene##Z35491|BAG1|573|BCL2-associated athanogene##NM_001172415|BAG1|573|BCL2-associated athanogene##NM_004323|BAG1|573|BCL2-associated athanogene##NM_001195536|CHMP5|51510|charged multivesicular body protein 5##NM_016410|CHMP5|51510|charged multivesicular body protein 5##BC016698|CHMP5|51510|charged multivesicular body protein 5##BC007457|CHMP5|51510|charged multivesicular body protein 5##AK315455|CHMP5|51510|charged multivesicular body protein 5##AK024753|CHMP5|51510|charged multivesicular body protein 5##BC018603|CHMP5|51510|charged multivesicular body protein 5##BC021168|CHMP5|51510|charged multivesicular body protein 5##AK295744|CHMP5|51510|charged multivesicular body protein 5	0.740393	CTCF.p2:18:0.740
chr11	29365402	29365543	reg1018908.p2	7.331	+	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-1233619	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-1235594	+	TSC_hg19_v1_chr11_-_28129704 BC026090 NM_031217	-1235749	-	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	673059	-	NM_000510 NM_001018080	887090	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	979180	+	BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##BC026090|KIF18A|81930|kinesin family member 18A##NM_031217|KIF18A|81930|kinesin family member 18A##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46	0.963425	CTCF.p2:-4:0.963
chr17	61484232	61484339	reg1017794.p1	7.331	+	BC144357 TSC_hg19_v1_chr17_+_61271368	-212924	+	NM_025185	-397388	+	AK122947 AK093076 AX747906 BX648705 NM_152598	-598608	-	BC091485 NM_001017917	33905	-	AK095244 NM_001017916 TSC_hg19_v1_chr17_-_61523715 AK301541 AK294403 BC002976 AK303177 AK316606 NM_001915	39351	-	TSC_hg19_v1_chr17_+_61554421 AK296566 AK309514 NM_000789 AK300516 AB208971 J04144	70143	+	BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC091485|CYB561|1534|cytochrome b-561##NM_001017917|CYB561|1534|cytochrome b-561##AK095244|CYB561|1534|cytochrome b-561##NM_001017916|CYB561|1534|cytochrome b-561##AK301541|CYB561|1534|cytochrome b-561##AK294403|CYB561|1534|cytochrome b-561##BC002976|CYB561|1534|cytochrome b-561##AK303177|CYB561|1534|cytochrome b-561##AK316606|CYB561|1534|cytochrome b-561##NM_001915|CYB561|1534|cytochrome b-561##AK296566|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK309514|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##NM_000789|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK300516|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AB208971|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##J04144|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	0.994648	CTCF.p2:3:0.995
chr19	8219010	8219121	reg1021051.p1	7.331	+	AB384635 AB053450 BC153882 NM_032447	-6690	-	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	-101118	+	AK292662 NM_001201359 NM_005624	-101420	+	TSC_hg19_v1_chr19_+_8274253 NM_024552 AK222621 AK225394 AK022151 BC063621	55183	+	TSC_hg19_v1_chr19_-_8373195 CR457174 EU831651 BC036814 BC007083 AY358420 AL365455 BC000668 AK222623 AK315656 AL136652 AK058014 AF161254 NM_001165895 NM_016579	154144	-	TSC_hg19_v1_chr19_-_8386260 AF050637 CR456915 CR542266 BC107892 AF054178	167192	-	AB053450|FBN3|84467|fibrillin 3##BC153882|FBN3|84467|fibrillin 3##NM_032447|FBN3|84467|fibrillin 3##BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25##AK292662|CCL25|6370|chemokine (C-C motif) ligand 25##NM_001201359|CCL25|6370|chemokine (C-C motif) ligand 25##NM_005624|CCL25|6370|chemokine (C-C motif) ligand 25##NM_024552|CERS4|79603|ceramide synthase 4##AK222621|CERS4|79603|ceramide synthase 4##AK225394|CERS4|79603|ceramide synthase 4##AK022151|CERS4|79603|ceramide synthase 4##BC063621|CERS4|79603|ceramide synthase 4##CR457174|CD320|51293|CD320 molecule##EU831651|CD320|51293|CD320 molecule##BC036814|CD320|51293|CD320 molecule##BC007083|CD320|51293|CD320 molecule##AY358420|CD320|51293|CD320 molecule##AL365455|CD320|51293|CD320 molecule##BC000668|CD320|51293|CD320 molecule##AK222623|CD320|51293|CD320 molecule##AK315656|CD320|51293|CD320 molecule##AL136652|CD320|51293|CD320 molecule##AK058014|CD320|51293|CD320 molecule##AF161254|CD320|51293|CD320 molecule##NM_001165895|CD320|51293|CD320 molecule##NM_016579|CD320|51293|CD320 molecule##AF050637|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR456915|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR542266|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##BC107892|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##AF054178|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa	0.602487	CTCF.p2:13:0.602
chr11	13204683	13204808	reg1015728.p1	7.330	+	TSC_hg19_v1_chr11_+_13030883 NM_001080521	-173821	+	TSC_hg19_v1_chr11_+_12960793 AK075236	-243934	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	-508782	+	TSC_hg19_v1_chr11_+_13299288 NM_001030272 NM_001030273 NM_001178	94547	+	TSC_hg19_v1_chr11_+_13299331 AK315174	94587	+	BC041129 TSC_hg19_v1_chr11_+_13299351 AK291510	94613	+	NM_001080521|RASSF10|644943|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_001030272|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001030273|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001178|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK315174|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##BC041129|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK291510|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like	0.74462	CTCF.p2:-1:0.745
chr16	77410405	77410508	reg1017593.p2	7.330	+	NM_001129979 TSC_hg19_v1_chr16_+_77233375	-177095	+	AF442486 AB463127 TSC_hg19_v1_chr16_+_77225481	-185031	+	TSC_hg19_v1_chr16_+_77225109 AB020679	-185300	+	AK293831 BC063283 NM_199355	58514	-	NM_001105663 NM_001243657 NM_001243660 NM_001243661 TSC_hg19_v1_chr16_+_77756410 AK296963 EU981826	345977	+	TSC_hg19_v1_chr16_+_77822482 AK290153 BC033537 NM_020927 AB046796 CU689646	412033	+	NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like##AF442486|MON1B|22879|MON1 homolog B (yeast)##AB020679|MON1B|22879|MON1 homolog B (yeast)##AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_001105663|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243657|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243660|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243661|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK296963|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##EU981826|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK290153|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##BC033537|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_020927|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AB046796|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like	0.19364	
chr20	31073101	31073260	reg1019688.p1	7.330	+	BC038088 TSC_hg19_v1_chr20_-_31071385	-1789	-	AK056286 TSC_hg19_v1_chr20_-_31071290 NM_080616	-1915	-	TSC_hg19_v1_chr20_+_31037448 AL080086	-35678	+	BC023657 BC065483 TSC_hg19_v1_chr20_-_31172902	99743	-	BC105014 BC105042 AK091025 AX746738 NM_182584	166490	-	AY542162 TSC_hg19_v1_chr20_-_31331262 BC000628 AK097059 AK027893	258073	-	BC038088|C20orf112|140688|chromosome 20 open reading frame 112##AK056286|C20orf112|140688|chromosome 20 open reading frame 112##NM_080616|C20orf112|140688|chromosome 20 open reading frame 112##BC023657|LOC284804|284804|uncharacterized LOC284804##BC065483|LOC284804|284804|uncharacterized LOC284804##BC105014|C20orf203|284805|chromosome 20 open reading frame 203##BC105042|C20orf203|284805|chromosome 20 open reading frame 203##AK091025|C20orf203|284805|chromosome 20 open reading frame 203##NM_182584|C20orf203|284805|chromosome 20 open reading frame 203##AY542162|COMMD7|149951|COMM domain containing 7##BC000628|COMMD7|149951|COMM domain containing 7##AK097059|COMMD7|149951|COMM domain containing 7##AK027893|COMMD7|149951|COMM domain containing 7	0.0	
chr6	31367461	31367575	reg1020003.p1	7.330	+	TSC_hg19_v1_chr6_-_31324990 AK124160 NM_005514 L42024	-42520	-	AK129796 AK130137 AK130166 AK130169 AK290570 AK292226 AK300685 AK301008 AK303541 AK309345 AK310586 AK313911 TSC_hg19_v1_chr6_-_31324957 BX647315	-42561	-	D14343 M28204 AF436095 AF436096 L20086 L20088 L20089 M86403 DQ336696 AF436090 AF436091 AF436092 AF436093 D87665 M12678 M15470 M28203 TSC_hg19_v1_chr6_-_31324946 BC007243 DQ336697 AF006634 AF022783 AF026218 AF170577 AF189017 AF418978 AF436098 AJ634528 AM711637 D25275 D31816 D49824 D50290 D50292 D50294 D50295 D50299 D50300 D83043 D85761 D85762 FM205711 L04695 L04696 L07743 L09736 L11603 L11604 L11666 L15005 L17005 L19923 L19937 L22027 L22028 L24373 L33922 L36318 L36591 L37880 L37881 L38504 L41214 L41925 L42345 M24033 M28205 M32317 M32319 M32320 M77774 M77775 M77776 M77777 M77778 M81798 M84380 M84381 M84382 M84383 M84384 M84385 M84694 U01848 U03027 U03698 U03859 U04243 U04244 U04245 U04787 U09864 U09912 U11262 U11264 U11265 U11266 U11268 U11269 U14943 U17107 U17572 U21052 U21053 U27608 U29057 U29083 U29480 U30904 U30936 U31971 U35431 U35734 U36492 U38800 U40498 U63653 U70528 U80945 U88407 X61706 X61708 X64454 X73578 X77658 X81363 X84725 X90390 X90391 X91749 Y08995 Y09058 Y09118 Y13029 Y13567 Z15143 Z22651 Z33453 AF389378 AF428252 AJ535113 BC091497 AY007140 BC013187 M16102 AK026595 AK130155 AK130654	-42594	-	TSC_hg19_v1_chr6_+_31368497 AK310028	959	+	BC016929 AK225393 L14848 NM_000247 NM_001177519 AK299135 AB590509 CU677769 AB506764 AY204547 AY750850	3864	+	TSC_hg19_v1_chr6_+_31430961 BX640979 AK093953 AK290875 L06175 AJ437509 BC106759 BC113853 BC114462	63464	+	AK124160|HLA-B|3106|major histocompatibility complex, class I, B##NM_005514|HLA-B|3106|major histocompatibility complex, class I, B##AK292226|HLA-B|3106|major histocompatibility complex, class I, B##AK300685|HLA-B|3106|major histocompatibility complex, class I, B##AK310586|HLA-B|3106|major histocompatibility complex, class I, B##AK313911|HLA-B|3106|major histocompatibility complex, class I, B##BX647315|HLA-B|3106|major histocompatibility complex, class I, B##M28204|HLA-B|3106|major histocompatibility complex, class I, B##AF436095|HLA-B|3106|major histocompatibility complex, class I, B##AF436096|HLA-B|3106|major histocompatibility complex, class I, B##DQ336696|HLA-B|3106|major histocompatibility complex, class I, B##AF436090|HLA-B|3106|major histocompatibility complex, class I, B##AF436091|HLA-B|3106|major histocompatibility complex, class I, B##AF436092|HLA-B|3106|major histocompatibility complex, class I, B##AF436093|HLA-B|3106|major histocompatibility complex, class I, B##D87665|HLA-B|3106|major histocompatibility complex, class I, B##M12678|HLA-B|3106|major histocompatibility complex, class I, B##M15470|HLA-B|3106|major histocompatibility complex, class I, B##M28203|HLA-B|3106|major histocompatibility complex, class I, B##BC007243|HLA-B|3106|major histocompatibility complex, class I, B##DQ336697|HLA-B|3106|major histocompatibility complex, class I, B##AF022783|HLA-B|3106|major histocompatibility complex, class I, B##AF026218|HLA-B|3106|major histocompatibility complex, class I, B##AF170577|HLA-B|3106|major histocompatibility complex, class I, B##AF189017|HLA-B|3106|major histocompatibility complex, class I, B##AF436098|HLA-B|3106|major histocompatibility complex, class I, B##AJ634528|HLA-B|3106|major histocompatibility complex, class I, B##D25275|HLA-B|3106|major histocompatibility complex, class I, B##D31816|HLA-B|3106|major histocompatibility complex, class I, B##D50290|HLA-B|3106|major histocompatibility complex, class I, B##D50292|HLA-B|3106|major histocompatibility complex, class I, B##D50294|HLA-B|3106|major histocompatibility complex, class I, B##D50295|HLA-B|3106|major histocompatibility complex, class I, B##D50300|HLA-B|3106|major histocompatibility complex, class I, B##D83043|HLA-B|3106|major histocompatibility complex, class I, B##L07743|HLA-B|3106|major histocompatibility complex, class I, B##L09736|HLA-B|3106|major histocompatibility complex, class I, B##L11603|HLA-B|3106|major histocompatibility complex, class I, B##L11604|HLA-B|3106|major histocompatibility complex, class I, B##L11666|HLA-B|3106|major histocompatibility complex, class I, B##L15005|HLA-B|3106|major histocompatibility complex, class I, B##L17005|HLA-B|3106|major histocompatibility complex, class I, B##L19937|HLA-B|3106|major histocompatibility complex, class I, B##L22027|HLA-B|3106|major histocompatibility complex, class I, B##L24373|HLA-B|3106|major histocompatibility complex, class I, B##L33922|HLA-B|3106|major histocompatibility complex, class I, B##L36591|HLA-B|3106|major histocompatibility complex, class I, B##L37880|HLA-B|3106|major histocompatibility complex, class I, B##L37881|HLA-B|3106|major histocompatibility complex, class I, B##L41925|HLA-B|3106|major histocompatibility complex, class I, B##L42345|HLA-B|3106|major histocompatibility complex, class I, B##M24033|HLA-B|3106|major histocompatibility complex, class I, B##M28205|HLA-B|3106|major histocompatibility complex, class I, B##M32317|HLA-B|3106|major histocompatibility complex, class I, B##M32319|HLA-B|3106|major histocompatibility complex, class I, B##M32320|HLA-B|3106|major histocompatibility complex, class I, B##M77774|HLA-B|3106|major histocompatibility complex, class I, B##M77776|HLA-B|3106|major histocompatibility complex, class I, B##M77778|HLA-B|3106|major histocompatibility complex, class I, B##M84380|HLA-B|3106|major histocompatibility complex, class I, B##M84382|HLA-B|3106|major histocompatibility complex, class I, B##U01848|HLA-B|3106|major histocompatibility complex, class I, B##U03027|HLA-B|3106|major histocompatibility complex, class I, B##U03859|HLA-B|3106|major histocompatibility complex, class I, B##U04244|HLA-B|3106|major histocompatibility complex, class I, B##U04245|HLA-B|3106|major histocompatibility complex, class I, B##U04787|HLA-B|3106|major histocompatibility complex, class I, B##U09864|HLA-B|3106|major histocompatibility complex, class I, B##U09912|HLA-B|3106|major histocompatibility complex, class I, B##U11262|HLA-B|3106|major histocompatibility complex, class I, B##U11264|HLA-B|3106|major histocompatibility complex, class I, B##U11265|HLA-B|3106|major histocompatibility complex, class I, B##U11266|HLA-B|3106|major histocompatibility complex, class I, B##U11268|HLA-B|3106|major histocompatibility complex, class I, B##U11269|HLA-B|3106|major histocompatibility complex, class I, B##U17107|HLA-B|3106|major histocompatibility complex, class I, B##U17572|HLA-B|3106|major histocompatibility complex, class I, B##U21052|HLA-B|3106|major histocompatibility complex, class I, B##U21053|HLA-B|3106|major histocompatibility complex, class I, B##U29057|HLA-B|3106|major histocompatibility complex, class I, B##U30904|HLA-B|3106|major histocompatibility complex, class I, B##U30936|HLA-B|3106|major histocompatibility complex, class I, B##U31971|HLA-B|3106|major histocompatibility complex, class I, B##U35431|HLA-B|3106|major histocompatibility complex, class I, B##U40498|HLA-B|3106|major histocompatibility complex, class I, B##U70528|HLA-B|3106|major histocompatibility complex, class I, B##U80945|HLA-B|3106|major histocompatibility complex, class I, B##U88407|HLA-B|3106|major histocompatibility complex, class I, B##X61708|HLA-B|3106|major histocompatibility complex, class I, B##X64454|HLA-B|3106|major histocompatibility complex, class I, B##X77658|HLA-B|3106|major histocompatibility complex, class I, B##X90390|HLA-B|3106|major histocompatibility complex, class I, B##X90391|HLA-B|3106|major histocompatibility complex, class I, B##X91749|HLA-B|3106|major histocompatibility complex, class I, B##Y13029|HLA-B|3106|major histocompatibility complex, class I, B##Y13567|HLA-B|3106|major histocompatibility complex, class I, B##Z15143|HLA-B|3106|major histocompatibility complex, class I, B##AF389378|HLA-B|3106|major histocompatibility complex, class I, B##BC091497|HLA-B|3106|major histocompatibility complex, class I, B##AY007140|HLA-B|3106|major histocompatibility complex, class I, B##BC013187|HLA-B|3106|major histocompatibility complex, class I, B##M16102|HLA-B|3106|major histocompatibility complex, class I, B##BC016929|MICA|100507436|MHC class I polypeptide-related sequence A##AK225393|MICA|100507436|MHC class I polypeptide-related sequence A##L14848|MICA|100507436|MHC class I polypeptide-related sequence A##NM_000247|MICA|100507436|MHC class I polypeptide-related sequence A##NM_001177519|MICA|100507436|MHC class I polypeptide-related sequence A##AK299135|MICA|100507436|MHC class I polypeptide-related sequence A##AB506764|MICA|100507436|MHC class I polypeptide-related sequence A##AY204547|MICA|100507436|MHC class I polypeptide-related sequence A##AY750850|MICA|100507436|MHC class I polypeptide-related sequence A##BX640979|HCP5|10866|HLA complex P5 (non-protein coding)##AK093953|HCP5|10866|HLA complex P5 (non-protein coding)##AK290875|HCP5|10866|HLA complex P5 (non-protein coding)##L06175|HCP5|10866|HLA complex P5 (non-protein coding)##BC106759|HCP5|10866|HLA complex P5 (non-protein coding)##BC113853|HCP5|10866|HLA complex P5 (non-protein coding)##BC114462|HCP5|10866|HLA complex P5 (non-protein coding)	0.0	
chr3	75601419	75601515	reg1017299.p2	7.329	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	-117318	-	AB384611 BC150608 NM_020872	-1031165	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1927429	-	AK000525 NM_001124759	112016	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	120019	+	NM_001128223	232787	-	BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##NM_001128223|ZNF717|100131827|zinc finger protein 717	0.993657	CTCF.p2:-1:0.994
chr6	161574059	161574192	reg1017128.p1	7.329	+	AK094629 TSC_hg19_v1_chr6_-_161413451	-160712	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-161267	+	TSC_hg19_v1_chr6_+_161412815 AF002715 NM_005922 NM_006724	-161311	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	120935	-	AK057286 NM_001080378 NM_152410 BC044227	1574044	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	1574602	-	BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AF002715|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_005922|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_006724|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.988655	CTCF.p2:5:0.989
chr6	34495071	34495165	reg1018186.p1	7.329	+	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	-12464	+	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	-61214	+	TSC_hg19_v1_chr6_-_34393847 NM_001203245 U14972 BC070235 BC001032 BC071946 AK311797 NM_001014 NM_001202470 NM_001204091	-101269	-	AB031549 BC021299 AF071538 AK301543 NM_001252294 NM_012391	28978	-	TSC_hg19_v1_chr6_-_34664565 AK313410 BC002328 BC010184 AK056964 BC075810	169428	-	TSC_hg19_v1_chr6_-_34664631 NM_022758 NM_024294	169508	-	AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001203245|RPS10|6204|ribosomal protein S10##U14972|RPS10|6204|ribosomal protein S10##BC070235|RPS10|6204|ribosomal protein S10##BC001032|RPS10|6204|ribosomal protein S10##BC071946|RPS10|6204|ribosomal protein S10##AK311797|RPS10|6204|ribosomal protein S10##NM_001014|RPS10|6204|ribosomal protein S10##NM_001202470|RPS10-NUDT3|100529239|RPS10-NUDT3 readthrough##NM_001204091|RPS10|6204|ribosomal protein S10##AB031549|SPDEF|25803|SAM pointed domain containing ets transcription factor##BC021299|SPDEF|25803|SAM pointed domain containing ets transcription factor##AF071538|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK301543|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_001252294|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_012391|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK313410|C6orf106|64771|chromosome 6 open reading frame 106##BC002328|C6orf106|64771|chromosome 6 open reading frame 106##BC010184|C6orf106|64771|chromosome 6 open reading frame 106##AK056964|C6orf106|64771|chromosome 6 open reading frame 106##BC075810|C6orf106|64771|chromosome 6 open reading frame 106##NM_022758|C6orf106|64771|chromosome 6 open reading frame 106##NM_024294|C6orf106|64771|chromosome 6 open reading frame 106	0.154558	
chr9	72955635	72955770	reg1020448.p1	7.329	+	TSC_hg19_v1_chr9_+_72873993 AB385355 AJ310550 DQ893364 DQ896768	-81713	+	BC038225 TSC_hg19_v1_chr9_+_72873908 BC017666 AB011166 AK055825	-81764	+	TSC_hg19_v1_chr9_+_72873893 AK304133 NM_015110	-81842	+	AB451404 CU686806 AB464604 EU446889 TSC_hg19_v1_chr9_-_73028875 BC074879 BC074880 AK313631 BC069431	72973	-	D31716 S72504 NM_001206	73853	-	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	528258	-	AJ310550|SMC5|23137|structural maintenance of chromosomes 5##DQ893364|SMC5|23137|structural maintenance of chromosomes 5##DQ896768|SMC5|23137|structural maintenance of chromosomes 5##BC038225|SMC5|23137|structural maintenance of chromosomes 5##BC017666|SMC5|23137|structural maintenance of chromosomes 5##AB011166|SMC5|23137|structural maintenance of chromosomes 5##AK055825|SMC5|23137|structural maintenance of chromosomes 5##AK304133|SMC5|23137|structural maintenance of chromosomes 5##NM_015110|SMC5|23137|structural maintenance of chromosomes 5##AB451404|KLF9|687|Kruppel-like factor 9##EU446889|KLF9|687|Kruppel-like factor 9##BC074879|KLF9|687|Kruppel-like factor 9##BC074880|KLF9|687|Kruppel-like factor 9##AK313631|KLF9|687|Kruppel-like factor 9##BC069431|KLF9|687|Kruppel-like factor 9##D31716|KLF9|687|Kruppel-like factor 9##S72504|KLF9|687|Kruppel-like factor 9##NM_001206|KLF9|687|Kruppel-like factor 9##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	0.087234	
chr1	104928	105053	reg1019855.p2	7.328	+	NM_001005484	-35900	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-75585	-	None	None	None	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	262658	+	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	517052	-	TSC_hg19_v1_chr1_-_714015 BC006361	609027	-	NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene	0.973166	CTCF.p2:4:0.973
chr11	117817552	117817733	reg1001040.p1	7.328	+	BC018715 AK300283 AB048796 AB048797 BC114928 AY190317 AK027798 TSC_hg19_v1_chr11_-_117800150 NM_001077263 NM_001206789 NM_001206790 NM_001244995	-17525	-	NM_001164831	-69442	-	TSC_hg19_v1_chr11_-_117747623 AK289629 NM_001164832 NM_001164836 NM_001164837 NM_001204268 NM_001243598 NM_022003	-69961	-	TSC_hg19_v1_chr11_+_117857108 AK291645 AK301484 NM_001558 AK301260 AK316342 AK313049 AK301492	39448	+	TSC_hg19_v1_chr11_+_117857155 U00672 BC028082 AB590303 CU688390 DQ891031 DQ893720 AK316146 AB209626	39645	+	NM_001083947 NM_001173551 NM_001173552 NM_019894 AK304113 AK311290 TSC_hg19_v1_chr11_+_117947754	130101	+	BC018715|TMPRSS13|84000|transmembrane protease, serine 13##AK300283|TMPRSS13|84000|transmembrane protease, serine 13##AB048796|TMPRSS13|84000|transmembrane protease, serine 13##AB048797|TMPRSS13|84000|transmembrane protease, serine 13##BC114928|TMPRSS13|84000|transmembrane protease, serine 13##AY190317|TMPRSS13|84000|transmembrane protease, serine 13##AK027798|TMPRSS13|84000|transmembrane protease, serine 13##NM_001077263|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206789|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206790|TMPRSS13|84000|transmembrane protease, serine 13##NM_001244995|TMPRSS13|84000|transmembrane protease, serine 13##NM_001164831|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK289629|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164832|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164836|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164837|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001204268|FXYD6-FXYD2|100533181|FXYD6-FXYD2 readthrough##NM_001243598|FXYD6-FXYD2|100533181|FXYD6-FXYD2 readthrough##NM_022003|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK291645|IL10RA|3587|interleukin 10 receptor, alpha##AK301484|IL10RA|3587|interleukin 10 receptor, alpha##NM_001558|IL10RA|3587|interleukin 10 receptor, alpha##AK301260|IL10RA|3587|interleukin 10 receptor, alpha##AK316342|IL10RA|3587|interleukin 10 receptor, alpha##AK313049|IL10RA|3587|interleukin 10 receptor, alpha##AK301492|IL10RA|3587|interleukin 10 receptor, alpha##U00672|IL10RA|3587|interleukin 10 receptor, alpha##BC028082|IL10RA|3587|interleukin 10 receptor, alpha##DQ891031|IL10RA|3587|interleukin 10 receptor, alpha##DQ893720|IL10RA|3587|interleukin 10 receptor, alpha##AK316146|IL10RA|3587|interleukin 10 receptor, alpha##AB209626|IL10RA|3587|interleukin 10 receptor, alpha##NM_001083947|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173551|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173552|TMPRSS4|56649|transmembrane protease, serine 4##NM_019894|TMPRSS4|56649|transmembrane protease, serine 4##AK304113|TMPRSS4|56649|transmembrane protease, serine 4	0.0	
chr1	200276726	200276839	reg1018690.p2	7.328	+	NM_001105517	-94127	+	AK316513 TSC_hg19_v1_chr1_+_200011716	-265058	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	-279913	+	AK021707 TSC_hg19_v1_chr1_-_200377270	100487	-	TSC_hg19_v1_chr1_-_200377488 AK022921	100756	-	AB384788 CU687444 AF125158 BC051905 TSC_hg19_v1_chr1_-_200378976	102127	-	NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK021707|ZNF281|23528|zinc finger protein 281##AK022921|ZNF281|23528|zinc finger protein 281##AF125158|ZNF281|23528|zinc finger protein 281##BC051905|ZNF281|23528|zinc finger protein 281	0.147201	
chr15	89547480	89547599	reg1017030.p1	7.328	+	BC003610 AK095908 AK222735 AK223182 AK304627 AK310357 AK312640 U58516 AY141974 TSC_hg19_v1_chr15_-_89456611 NM_001114614 NM_005928	-90900	-	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	-90979	-	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	-108741	-	NM_007011 NM_152924	83841	+	TSC_hg19_v1_chr15_+_89631652 BC090052 AF546700 BC019248	84109	+	TSC_hg19_v1_chr15_+_89631708 AL110291 AK222841 AK290340 AK223083 AK296827	84164	+	BC003610|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK095908|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK222735|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK223182|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK304627|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK310357|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK312640|MFGE8|4240|milk fat globule-EGF factor 8 protein##U58516|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY141974|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_001114614|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_005928|MFGE8|4240|milk fat globule-EGF factor 8 protein##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_007011|ABHD2|11057|abhydrolase domain containing 2##NM_152924|ABHD2|11057|abhydrolase domain containing 2##BC090052|ABHD2|11057|abhydrolase domain containing 2##AF546700|ABHD2|11057|abhydrolase domain containing 2##BC019248|ABHD2|11057|abhydrolase domain containing 2##AL110291|ABHD2|11057|abhydrolase domain containing 2##AK222841|ABHD2|11057|abhydrolase domain containing 2##AK290340|ABHD2|11057|abhydrolase domain containing 2##AK223083|ABHD2|11057|abhydrolase domain containing 2##AK296827|ABHD2|11057|abhydrolase domain containing 2	0.896316	CTCF.p2:9:0.896
chr6	138325722	138325834	reg1019314.p1	7.328	+	TSC_hg19_v1_chr6_-_138189314 AK124173	-136428	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-137241	+	BC051352 AK096362 NM_175747	-510253	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	102790	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	157358	+	BC069109 NM_021635 AF189269 AF189270	213848	-	AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1	0.460315	CTCF.p2:-8:0.460
chr10	46565005	46565128	reg1018890.p1	7.327	+	BC171820 BC171833 AF411132 NM_133446	-222153	-	NM_001169106 NM_001169107 NM_015262 TSC_hg19_v1_chr10_+_46222703 AK291430 AB011164 BC150611 AK303048 AK293929 BC053887	-342359	+	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	-396852	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	54930	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	75622	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	75955	-	BC171833|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##AF411132|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##NM_133446|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##NM_001169106|FAM21C|253725|family with sequence similarity 21, member C##NM_001169107|FAM21C|253725|family with sequence similarity 21, member C##NM_015262|FAM21C|253725|family with sequence similarity 21, member C##AK291430|FAM21C|253725|family with sequence similarity 21, member C##AB011164|FAM21C|253725|family with sequence similarity 21, member C##BC150611|FAM21C|253725|family with sequence similarity 21, member C##AK303048|FAM21C|253725|family with sequence similarity 21, member C##AK293929|FAM21C|253725|family with sequence similarity 21, member C##BC053887|FAM21C|253725|family with sequence similarity 21, member C##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	0.0	
chr19	51059927	51060069	reg1015554.p2	7.326	+	CU688154 TSC_hg19_v1_chr19_-_51017942 BC066359 NM_001024656	-42133	-	TSC_hg19_v1_chr19_-_51017156 NM_001114598	-42843	-	AF247787 NM_138334 TSC_hg19_v1_chr19_-_51014412 BC051380 BC062416 AK131052	-45588	-	BC131897 NM_001080457	11292	-	AL136594 NM_032298	81303	-	NM_001160328 NM_001160329 BC031067 BC028379 TSC_hg19_v1_chr19_-_51143094	83127	-	BC066359|ASPDH|554235|aspartate dehydrogenase domain containing##NM_001024656|ASPDH|554235|aspartate dehydrogenase domain containing##NM_001114598|ASPDH|554235|aspartate dehydrogenase domain containing##AF247787|JOSD2|126119|Josephin domain containing 2##NM_138334|JOSD2|126119|Josephin domain containing 2##BC051380|JOSD2|126119|Josephin domain containing 2##BC062416|JOSD2|126119|Josephin domain containing 2##AK131052|JOSD2|126119|Josephin domain containing 2##BC131897|LRRC4B|94030|leucine rich repeat containing 4B##NM_001080457|LRRC4B|94030|leucine rich repeat containing 4B##AL136594|SYT3|84258|synaptotagmin III##NM_032298|SYT3|84258|synaptotagmin III##NM_001160328|SYT3|84258|synaptotagmin III##NM_001160329|SYT3|84258|synaptotagmin III##BC031067|SYT3|84258|synaptotagmin III##BC028379|SYT3|84258|synaptotagmin III	0.991606	CTCF.p2:19:0.992
chr22	26959165	26959269	reg1017464.p2	7.326	+	TSC_hg19_v1_chr22_+_26908507 AK057443	-50724	+	TSC_hg19_v1_chr22_-_26908440 AK025443 AK299964 BC011599 BC033080 AL080147 NM_001008697 NM_012143 AK298303 AL050258	-50824	-	TSC_hg19_v1_chr22_+_26879842 BC066962 AK293916 NM_001013694	-79387	+	AK075139 NM_001008566	2134	-	TSC_hg19_v1_chr22_-_26986052 AF049891 BC017509	26834	-	TSC_hg19_v1_chr22_-_26986070 AK304545 BC001057 AL136623	26850	-	AK025443|TFIP11|24144|tuftelin interacting protein 11##AK299964|TFIP11|24144|tuftelin interacting protein 11##BC011599|TFIP11|24144|tuftelin interacting protein 11##BC033080|TFIP11|24144|tuftelin interacting protein 11##AL080147|TFIP11|24144|tuftelin interacting protein 11##NM_001008697|TFIP11|24144|tuftelin interacting protein 11##NM_012143|TFIP11|24144|tuftelin interacting protein 11##AK298303|TFIP11|24144|tuftelin interacting protein 11##AL050258|TFIP11|24144|tuftelin interacting protein 11##BC066962|SRRD|402055|SRR1 domain containing##AK293916|SRRD|402055|SRR1 domain containing##NM_001013694|SRRD|402055|SRR1 domain containing##AK075139|TPST2|8459|tyrosylprotein sulfotransferase 2##NM_001008566|TPST2|8459|tyrosylprotein sulfotransferase 2##AF049891|TPST2|8459|tyrosylprotein sulfotransferase 2##BC017509|TPST2|8459|tyrosylprotein sulfotransferase 2##AK304545|TPST2|8459|tyrosylprotein sulfotransferase 2##BC001057|TPST2|8459|tyrosylprotein sulfotransferase 2##AL136623|TPST2|8459|tyrosylprotein sulfotransferase 2	0.996692	CTCF.p2:0:0.997
chr3	58153198	58153328	reg1022128.p1	7.325	+	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	-159116	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-410061	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-474524	-	NM_004944	47134	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	70020	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	70267	+	AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6	0.05977	
chr3	161572055	161572166	reg1019092.p1	7.324	+	NM_001080440	-357515	+	AF458592 BC037817 NM_001040100	-482302	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-632989	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	3224168	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	3342395	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	3983083	-	NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase	0.996694	CTCF.p2:-4:0.997
chr1	175857216	175857314	reg1017125.p2	7.323	+	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	-144555	-	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-695235	-	AK127044 NM_022093	-820272	+	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	318900	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	319053	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	319104	-	AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2	0.0	
chr16	29126860	29127009	reg1019591.p1	7.323	+	TSC_hg19_v1_chr16_+_29086310 BC042920 AK225670 AK298442 AK301253	-40629	+	AK307342 NM_001014987 NM_001014988 NM_014387 TSC_hg19_v1_chr16_+_28996403 AJ223280	-130536	+	BC011563 NM_001014989	-130788	+	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	338917	+	BC022832 NM_001031827 NM_001039182	339350	-	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	344292	+	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK307342|LAT|27040|linker for activation of T cells##NM_001014987|LAT|27040|linker for activation of T cells##NM_001014988|LAT|27040|linker for activation of T cells##NM_014387|LAT|27040|linker for activation of T cells##AJ223280|LAT|27040|linker for activation of T cells##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3	0.925448	CTCF.p2:-2:0.925
chr18	21392617	21392749	reg1017350.p2	7.323	+	TSC_hg19_v1_chr18_+_21269563 BC093406 NM_001127717 NM_198129 AY327115 AY327116	-123096	+	TSC_hg19_v1_chr18_+_21269416 AK096422	-123269	+	TSC_hg19_v1_chr18_-_21242592 CU688952 AK313667 AK057782 BC030622 NM_173505	-149963	-	TSC_hg19_v1_chr18_+_21452983 NM_000227 NM_001127718 X85107 X84392 AY327114 L34155	60328	+	AK091080 AX746769 NM_153211 BC121034 BC121035	180111	+	TSC_hg19_v1_chr18_+_21594449 BC016833 NM_001135993 NM_001243425	201716	+	BC093406|LAMA3|3909|laminin, alpha 3##NM_001127717|LAMA3|3909|laminin, alpha 3##NM_198129|LAMA3|3909|laminin, alpha 3##AY327115|LAMA3|3909|laminin, alpha 3##AY327116|LAMA3|3909|laminin, alpha 3##AK096422|LAMA3|3909|laminin, alpha 3##AK313667|ANKRD29|147463|ankyrin repeat domain 29##AK057782|ANKRD29|147463|ankyrin repeat domain 29##BC030622|ANKRD29|147463|ankyrin repeat domain 29##NM_173505|ANKRD29|147463|ankyrin repeat domain 29##NM_000227|LAMA3|3909|laminin, alpha 3##NM_001127718|LAMA3|3909|laminin, alpha 3##X85107|LAMA3|3909|laminin, alpha 3##X84392|LAMA3|3909|laminin, alpha 3##AY327114|LAMA3|3909|laminin, alpha 3##L34155|LAMA3|3909|laminin, alpha 3##AK091080|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_153211|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121034|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121035|TTC39C|125488|tetratricopeptide repeat domain 39C##BC016833|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001135993|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001243425|TTC39C|125488|tetratricopeptide repeat domain 39C	0.99594	CTCF.p2:19:0.996
chr5	180594961	180595110	reg1017902.p2	7.323	+	NM_206880	-13093	+	AK298113 TSC_hg19_v1_chr5_+_180467271 BC062459	-127720	+	NM_152547 TSC_hg19_v1_chr5_+_180467233 AK057097 AY358358	-127798	+	AF396655 NM_203297	32894	-	AF396652 AF396653 NM_203294 NM_203295 NM_203296	36304	-	DQ892585 DQ895803 BC080553 BC011567 AK314872 AF396651 AX776005 BC132863 BC132867 NM_033342 NM_203293 TSC_hg19_v1_chr5_-_180632192 AF220032	37166	-	NM_206880|OR2V2|285659|olfactory receptor, family 2, subfamily V, member 2##AK298113|BTNL9|153579|butyrophilin-like 9##BC062459|BTNL9|153579|butyrophilin-like 9##NM_152547|BTNL9|153579|butyrophilin-like 9##AK057097|BTNL9|153579|butyrophilin-like 9##AY358358|BTNL9|153579|butyrophilin-like 9##AF396655|TRIM7|81786|tripartite motif containing 7##NM_203297|TRIM7|81786|tripartite motif containing 7##AF396652|TRIM7|81786|tripartite motif containing 7##AF396653|TRIM7|81786|tripartite motif containing 7##NM_203294|TRIM7|81786|tripartite motif containing 7##NM_203295|TRIM7|81786|tripartite motif containing 7##NM_203296|TRIM7|81786|tripartite motif containing 7##DQ892585|TRIM7|81786|tripartite motif containing 7##DQ895803|TRIM7|81786|tripartite motif containing 7##BC080553|TRIM7|81786|tripartite motif containing 7##BC011567|TRIM7|81786|tripartite motif containing 7##AK314872|TRIM7|81786|tripartite motif containing 7##AF396651|TRIM7|81786|tripartite motif containing 7##BC132863|TRIM7|81786|tripartite motif containing 7##BC132867|TRIM7|81786|tripartite motif containing 7##NM_033342|TRIM7|81786|tripartite motif containing 7##NM_203293|TRIM7|81786|tripartite motif containing 7##AF220032|TRIM7|81786|tripartite motif containing 7	0.985432	CTCF.p2:10:0.985
chr10	15013991	15014136	reg1021661.p1	7.322	+	NM_001080836	-12626	+	CU692508 TSC_hg19_v1_chr10_-_14996096 BC108276 AK022922 BC022254 AF395747 AF395748 AF395749 AF395750 AF395751 AF395752 AJ296101 BC009185 BX648858 AK021422 AK290598 AK307912 NM_001033855 NM_001033857 NM_001033858 NM_022487	-18009	-	NM_001193424 NM_001193426 BC029360 TSC_hg19_v1_chr10_+_14920864 NM_001193425 NM_001193427 AK222565 AK225369 AK027067 CU688630 BC007754 NM_024670	-93224	+	NM_001039702 NM_018324 BC050372 AK001844 AK001968	71864	+	BC029526 AK095538 AK295169 NM_001039844 TSC_hg19_v1_chr10_-_15130776	116711	-	NM_001097590 NM_006414 NM_183005 TSC_hg19_v1_chr10_+_15139195 AK223418	125129	+	NM_001080836|MEIG1|644890|meiosis expressed gene 1 homolog (mouse)##BC108276|DCLRE1C|64421|DNA cross-link repair 1C##AK022922|DCLRE1C|64421|DNA cross-link repair 1C##BC022254|DCLRE1C|64421|DNA cross-link repair 1C##AF395747|DCLRE1C|64421|DNA cross-link repair 1C##AF395748|DCLRE1C|64421|DNA cross-link repair 1C##AF395749|DCLRE1C|64421|DNA cross-link repair 1C##AF395750|DCLRE1C|64421|DNA cross-link repair 1C##AF395751|DCLRE1C|64421|DNA cross-link repair 1C##AF395752|DCLRE1C|64421|DNA cross-link repair 1C##AJ296101|DCLRE1C|64421|DNA cross-link repair 1C##BC009185|DCLRE1C|64421|DNA cross-link repair 1C##BX648858|DCLRE1C|64421|DNA cross-link repair 1C##AK021422|DCLRE1C|64421|DNA cross-link repair 1C##AK290598|DCLRE1C|64421|DNA cross-link repair 1C##AK307912|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033855|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033857|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033858|DCLRE1C|64421|DNA cross-link repair 1C##NM_022487|DCLRE1C|64421|DNA cross-link repair 1C##NM_001193424|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193426|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##BC029360|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193425|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193427|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK222565|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK225369|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK027067|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##BC007754|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_024670|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001039702|OLAH|55301|oleoyl-ACP hydrolase##NM_018324|OLAH|55301|oleoyl-ACP hydrolase##BC050372|OLAH|55301|oleoyl-ACP hydrolase##AK001844|OLAH|55301|oleoyl-ACP hydrolase##AK001968|OLAH|55301|oleoyl-ACP hydrolase##BC029526|ACBD7|414149|acyl-CoA binding domain containing 7##AK095538|ACBD7|414149|acyl-CoA binding domain containing 7##AK295169|ACBD7|414149|acyl-CoA binding domain containing 7##NM_001039844|ACBD7|414149|acyl-CoA binding domain containing 7##NM_001097590|RPP38|10557|ribonuclease P/MRP 38kDa subunit##NM_006414|RPP38|10557|ribonuclease P/MRP 38kDa subunit##NM_183005|RPP38|10557|ribonuclease P/MRP 38kDa subunit##AK223418|RPP38|10557|ribonuclease P/MRP 38kDa subunit	0.838901	CTCF.p2:17:0.839
chr13	49814310	49814428	reg1019190.p1	7.322	+	AB463896 AY603964 NM_001507	-19897	+	TSC_hg19_v1_chr13_+_49684452 AK302415 AJ749707 NM_014923 AB023187 BC107793	-129913	+	TSC_hg19_v1_chr13_+_49550955 BC136617 BC144301 BC132812	-263385	+	NM_001193478 NM_030911 TSC_hg19_v1_chr13_+_49822076 BC022801 BC092434 AK312835 BC032889 BC070238 AK297400 BC009562 AY027525 BC048092 BC125202 BC125203	7720	+	NM_030925	161365	-	TSC_hg19_v1_chr13_-_50018201 AY211923 AY288977 BX647518 NM_001079670	203812	-	AY603964|MLNR|2862|motilin receptor##NM_001507|MLNR|2862|motilin receptor##AK302415|FNDC3A|22862|fibronectin type III domain containing 3A##AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A##NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A##AB023187|FNDC3A|22862|fibronectin type III domain containing 3A##BC107793|FNDC3A|22862|fibronectin type III domain containing 3A##BC136617|FNDC3A|22862|fibronectin type III domain containing 3A##BC144301|FNDC3A|22862|fibronectin type III domain containing 3A##BC132812|FNDC3A|22862|fibronectin type III domain containing 3A##NM_001193478|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##NM_030911|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC022801|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC092434|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AK312835|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC032889|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC070238|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AK297400|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC009562|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AY027525|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC048092|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC125202|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC125203|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##NM_030925|CAB39L|81617|calcium binding protein 39-like##AY211923|CAB39L|81617|calcium binding protein 39-like##AY288977|CAB39L|81617|calcium binding protein 39-like##BX647518|CAB39L|81617|calcium binding protein 39-like##NM_001079670|CAB39L|81617|calcium binding protein 39-like	0.22434	CTCF.p2:-6:0.224
chr13	81591838	81591957	reg1017509.p1	7.322	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-676833	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-678855	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-1536342	+	TSC_hg19_v1_chr13_-_84456424 BC051738	2864528	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	2864603	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	4781542	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.932769	CTCF.p2:-5:0.933
chr16	31708380	31708479	reg1017865.p1	7.322	+	NM_016633 AF147435 AF208865 AF364517 BC035842	-169213	+	TSC_hg19_v1_chr16_-_31519698 BC054514 BC009308 AK222913 AK296166 AK296491 AK304608 AK023930 NM_022744	-188762	-	BC000822 TSC_hg19_v1_chr16_-_31505257	-203177	-	TSC_hg19_v1_chr16_+_31711914 AK054698	3487	+	TSC_hg19_v1_chr16_+_31711931 BC021555 BC000552	3511	+	TSC_hg19_v1_chr16_+_31724557 NM_001130913 BC055408	16117	+	NM_016633|AHSP|51327|alpha hemoglobin stabilizing protein##AF147435|AHSP|51327|alpha hemoglobin stabilizing protein##AF208865|AHSP|51327|alpha hemoglobin stabilizing protein##AF364517|AHSP|51327|alpha hemoglobin stabilizing protein##BC035842|AHSP|51327|alpha hemoglobin stabilizing protein##BC009308|C16orf58|64755|chromosome 16 open reading frame 58##AK222913|C16orf58|64755|chromosome 16 open reading frame 58##AK296166|C16orf58|64755|chromosome 16 open reading frame 58##AK296491|C16orf58|64755|chromosome 16 open reading frame 58##AK304608|C16orf58|64755|chromosome 16 open reading frame 58##AK023930|C16orf58|64755|chromosome 16 open reading frame 58##NM_022744|C16orf58|64755|chromosome 16 open reading frame 58##BC000822|C16orf58|64755|chromosome 16 open reading frame 58##AK054698|KIAA0664L3|100132341|KIAA0664-like 3##BC021555|KIAA0664L3|100132341|KIAA0664-like 3##BC000552|KIAA0664L3|100132341|KIAA0664-like 3##NM_001130913|ZNF720|124411|zinc finger protein 720##BC055408|ZNF720|124411|zinc finger protein 720	0.241771	CTCF.p2:-12:0.242
chr22	27232045	27232167	reg1018513.p1	7.322	+	TSC_hg19_v1_chr22_+_27068725 AK026502	-163366	+	TSC_hg19_v1_chr22_+_27053392 AB263414 AB263415 AB263416 AB263417 AK098833	-178634	+	BC069404 CR456424 NM_001886 U59057 AB528112 CU012985 CU013273 BC096171 BC096172 BC096173 BC096174	-214175	+	TSC_hg19_v1_chr22_-_28197481 NM_002430 X82209	965371	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	1083068	-	TSC_hg19_v1_chr22_-_28315203 BC031427	1083101	-	AK026502|LOC100507637|100507637|uncharacterized LOC100507637##AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##BC069404|CRYBA4|1413|crystallin, beta A4##CR456424|CRYBA4|1413|crystallin, beta A4##NM_001886|CRYBA4|1413|crystallin, beta A4##U59057|CRYBA4|1413|crystallin, beta A4##CU012985|CRYBA4|1413|crystallin, beta A4##CU013273|CRYBA4|1413|crystallin, beta A4##BC096171|CRYBA4|1413|crystallin, beta A4##BC096172|CRYBA4|1413|crystallin, beta A4##BC096173|CRYBA4|1413|crystallin, beta A4##BC096174|CRYBA4|1413|crystallin, beta A4##NM_002430|MN1|4330|meningioma (disrupted in balanced translocation) 1##X82209|MN1|4330|meningioma (disrupted in balanced translocation) 1##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta	0.9679	CTCF.p2:-19:0.968
chr2	71228349	71228452	reg1018030.p1	7.322	+	TSC_hg19_v1_chr2_-_71222002 NM_144582	-6396	-	AK303594 TSC_hg19_v1_chr2_-_71221955 AY358783	-6440	-	BC128461 BC128462 TSC_hg19_v1_chr2_-_71221953	-6448	-	NM_017567 TSC_hg19_v1_chr2_+_71295427	67017	+	TSC_hg19_v1_chr2_+_71295436 AK297224	67042	+	TSC_hg19_v1_chr2_+_71295777 BC001029 BC005371 AK001812 AK097223 AK222645 BC036843 AJ242910 AB463914 CU674506 CU675147 DQ892674 DQ895916 CR457271	67349	+	NM_144582|TEX261|113419|testis expressed 261##AK303594|TEX261|113419|testis expressed 261##AY358783|TEX261|113419|testis expressed 261##BC128461|TEX261|113419|testis expressed 261##BC128462|TEX261|113419|testis expressed 261##NM_017567|NAGK|55577|N-acetylglucosamine kinase##AK297224|NAGK|55577|N-acetylglucosamine kinase##BC001029|NAGK|55577|N-acetylglucosamine kinase##BC005371|NAGK|55577|N-acetylglucosamine kinase##AK001812|NAGK|55577|N-acetylglucosamine kinase##AK097223|NAGK|55577|N-acetylglucosamine kinase##AK222645|NAGK|55577|N-acetylglucosamine kinase##BC036843|NAGK|55577|N-acetylglucosamine kinase##AJ242910|NAGK|55577|N-acetylglucosamine kinase##DQ892674|NAGK|55577|N-acetylglucosamine kinase##DQ895916|NAGK|55577|N-acetylglucosamine kinase##CR457271|NAGK|55577|N-acetylglucosamine kinase	0.999834	CTCF.p2:16:1.000
chr3	149483682	149483783	reg1019171.p1	7.322	+	TSC_hg19_v1_chr3_-_149470277 AF059618 BC001228 BC022206 AF125096 BC093077 NM_016094	-13462	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	-13493	-	AK022036 NM_001168278	-62673	-	BC171805 NM_001144960	26877	-	TSC_hg19_v1_chr3_+_149530500 NM_007282 NM_183381 AK090638	46745	+	TSC_hg19_v1_chr3_+_149530987 AK313304	47254	+	AF059618|COMMD2|51122|COMM domain containing 2##BC001228|COMMD2|51122|COMM domain containing 2##BC022206|COMMD2|51122|COMM domain containing 2##AF125096|COMMD2|51122|COMM domain containing 2##BC093077|COMMD2|51122|COMM domain containing 2##NM_016094|COMMD2|51122|COMM domain containing 2##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##BC171805|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1##NM_001144960|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1##NM_007282|RNF13|11342|ring finger protein 13##NM_183381|RNF13|11342|ring finger protein 13##AK090638|RNF13|11342|ring finger protein 13##AK313304|RNF13|11342|ring finger protein 13	0.993331	CTCF.p2:-5:0.993
chr3	157324488	157324620	reg1021247.p1	7.322	+	NM_001099777 NM_001130001 NM_001130002 NM_001243729 BC126187 BC126189 BC144066 BC029129 BC010062	-63372	+	BC078142 BC057999 NM_001167915 NM_001167916	-103166	-	BC111017 AB051479 NM_001167911 NM_001167912	-103423	-	TSC_hg19_v1_chr3_-_157823531 AK309293	498985	-	HQ258019 AJ002367 TSC_hg19_v1_chr3_-_157823847 BC008829 NM_001163678 NM_003030 NM_006884	499329	-	TSC_hg19_v1_chr3_+_157827910 AK290334 BC006982 NM_016625 AF208853 BC010357	503337	+	NM_001099777|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130001|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130002|C3orf55|152078|chromosome 3 open reading frame 55##NM_001243729|C3orf55|152078|chromosome 3 open reading frame 55##BC126187|C3orf55|152078|chromosome 3 open reading frame 55##BC126189|C3orf55|152078|chromosome 3 open reading frame 55##BC144066|C3orf55|152078|chromosome 3 open reading frame 55##BC029129|C3orf55|152078|chromosome 3 open reading frame 55##BC010062|C3orf55|152078|chromosome 3 open reading frame 55##BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##HQ258019|SHOX2|6474|short stature homeobox 2##AJ002367|SHOX2|6474|short stature homeobox 2##BC008829|SHOX2|6474|short stature homeobox 2##NM_001163678|SHOX2|6474|short stature homeobox 2##NM_003030|SHOX2|6474|short stature homeobox 2##NM_006884|SHOX2|6474|short stature homeobox 2##AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1##NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1##AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1	0.901384	CTCF.p2:8:0.901
chr7	32101873	32102010	reg1020416.p1	7.322	+	NM_001145123 NM_006658	-375311	+	AK128026 NM_194300	-544964	+	AK055238 AF248954 NM_022728	-721419	-	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	8564	-	AK094180 NM_001191059 U40371 NM_005020	9070	-	NM_001191058	236441	-	NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129##AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191058|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	0.400712	CTCF.p2:8:0.401
chr7	23902964	23903094	reg1018380.p1	7.321	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-153113	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	-183206	+	TSC_hg19_v1_chr7_+_23637005 NM_138771 AK289911 AY358713 AX721042	-266014	+	BC029497 NM_000905 AK312156 K01911 M15789	420814	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	710059	+	TSC_hg19_v1_chr7_-_24797042 BC099911	894008	-	AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##NM_138771|CCDC126|90693|coiled-coil domain containing 126##AK289911|CCDC126|90693|coiled-coil domain containing 126##AY358713|CCDC126|90693|coiled-coil domain containing 126##BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC099911|DFNA5|1687|deafness, autosomal dominant 5	0.926805	CTCF.p2:-16:0.927
chr11	111984300	111984418	reg1013164.p1	7.320	+	TSC_hg19_v1_chr11_+_111957622 AB006202 AK075360 BC009574 BC012603 BC070307 BC071756 BT007238 CR456932 CU675071 DQ892701 DQ896292	-26738	+	TSC_hg19_v1_chr11_+_111957604 NM_003002 BC015188 BC005263 BC015992 BC071755 BC022350	-26788	+	TSC_hg19_v1_chr11_-_111957481 AF165967 AF152350 AF150087 BC000711 AK312169 AK025397 BC105986 BC106067 NM_012459	-26888	-	AF380360 AY044641 TSC_hg19_v1_chr11_-_112034813 AY266351 D49950 BC007007 AK311301 BC007461 NM_001243211 NM_001562	50399	-	BC029506 NM_031275 AF285600	53749	+	NM_031938 AK315300 BC041656 BC047934 AK091783 AX747181 AJ290393 CU692016 AF276432	61983	+	AB006202|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##AK075360|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC009574|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC012603|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC070307|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC071756|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BT007238|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##CR456932|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##DQ892701|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##DQ896292|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##NM_003002|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC015188|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC005263|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC015992|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC071755|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##BC022350|SDHD|6392|succinate dehydrogenase complex, subunit D, integral membrane protein##AF165967|TIMM8B|26521|translocase of inner mitochondrial membrane 8 homolog B (yeast)##AF152350|TIMM8B|26521|translocase of inner mitochondrial membrane 8 homolog B (yeast)##AF150087|TIMM8B|26521|translocase of inner mitochondrial membrane 8 homolog B (yeast)##BC000711|TIMM8B|26521|translocase of inner mitochondrial membrane 8 homolog B (yeast)##AK312169|TIMM8B|26521|translocase of inner mitochondrial membrane 8 homolog B (yeast)##AK025397|TIMM8B|26521|translocase of inner mitochondrial membrane 8 homolog B (yeast)##BC105986|TIMM8B|26521|translocase of inner mitochondrial membrane 8 homolog B (yeast)##BC106067|TIMM8B|26521|translocase of inner mitochondrial membrane 8 homolog B (yeast)##NM_012459|TIMM8B|26521|translocase of inner mitochondrial membrane 8 homolog B (yeast)##AF380360|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##AY044641|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##AY266351|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##D49950|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##BC007007|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##AK311301|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##BC007461|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##NM_001243211|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##NM_001562|IL18|3606|interleukin 18 (interferon-gamma-inducing factor)##BC029506|TEX12|56158|testis expressed 12##NM_031275|TEX12|56158|testis expressed 12##AF285600|TEX12|56158|testis expressed 12##NM_031938|BCO2|83875|beta-carotene oxygenase 2##AK315300|BCO2|83875|beta-carotene oxygenase 2##BC041656|BCO2|83875|beta-carotene oxygenase 2##BC047934|BCO2|83875|beta-carotene oxygenase 2##AK091783|BCO2|83875|beta-carotene oxygenase 2##AJ290393|BCO2|83875|beta-carotene oxygenase 2##AF276432|BCO2|83875|beta-carotene oxygenase 2	0.940444	CTCF.p2:-18:0.940
chr1	241694742	241694890	reg1018309.p1	7.320	+	AK312415 TSC_hg19_v1_chr1_-_241683076 NM_000143	-11736	-	TSC_hg19_v1_chr1_-_241683023 BT009839 AB590519 EU176358 BC017444 BC003108 U48857 U59309	-11784	-	TSC_hg19_v1_chr1_-_241520469 BC022009 NM_002924	-174344	-	NM_003679 AK310937 BC005297 AK291558 AF056032 Y13153 CU675097	771	+	BC117360 NM_001821 X64728	104350	-	TSC_hg19_v1_chr1_-_241803669 BC051900 AF140242 BC073872 BC062622 AF303588 BC036773 BC026242 NM_014322	108659	-	AK312415|FH|2271|fumarate hydratase##NM_000143|FH|2271|fumarate hydratase##BT009839|FH|2271|fumarate hydratase##EU176358|FH|2271|fumarate hydratase##BC017444|FH|2271|fumarate hydratase##BC003108|FH|2271|fumarate hydratase##U48857|FH|2271|fumarate hydratase##U59309|FH|2271|fumarate hydratase##BC022009|RGS7|6000|regulator of G-protein signaling 7##NM_002924|RGS7|6000|regulator of G-protein signaling 7##NM_003679|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AK310937|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##BC005297|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AK291558|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AF056032|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##Y13153|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)##NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)##X64728|CHML|1122|choroideremia-like (Rab escort protein 2)##BC051900|OPN3|23596|opsin 3##AF140242|OPN3|23596|opsin 3##BC073872|OPN3|23596|opsin 3##BC062622|OPN3|23596|opsin 3##AF303588|OPN3|23596|opsin 3##BC036773|OPN3|23596|opsin 3##NM_014322|OPN3|23596|opsin 3	0.956349	CTCF.p2:-35:0.956
chr16	69964210	69964345	reg1019593.p1	7.320	+	AK126332 NM_199424 TSC_hg19_v1_chr16_+_69958904	-5375	+	TSC_hg19_v1_chr16_+_69796265 BC064531 AJ001982 NM_007014 NM_199423 U96114	-168021	+	TSC_hg19_v1_chr16_+_69796208 AK312792	-168089	+	BC078143 NM_001136214	20348	+	AF521893 NM_182619 BC141808 AF428259 AF448856 AL833339 AK289884 AK298310 AK074773 EU831776 EU831854 CU687316 AK096051	20815	+	AK292860 TSC_hg19_v1_chr16_-_70099722	135448	-	AK126332|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_199424|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##BC064531|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AJ001982|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_007014|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_199423|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##U96114|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AK312792|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##BC078143|CLEC18A|348174|C-type lectin domain family 18, member A##NM_001136214|CLEC18A|348174|C-type lectin domain family 18, member A##AF521893|CLEC18A|348174|C-type lectin domain family 18, member A##NM_182619|CLEC18A|348174|C-type lectin domain family 18, member A##BC141808|CLEC18A|348174|C-type lectin domain family 18, member A##AF428259|CLEC18A|348174|C-type lectin domain family 18, member A##AF448856|CLEC18C|283971|C-type lectin domain family 18, member C##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AK289884|CLEC18A|348174|C-type lectin domain family 18, member A##AK298310|CLEC18A|348174|C-type lectin domain family 18, member A##AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##EU831776|CLEC18A|348174|C-type lectin domain family 18, member A##EU831854|CLEC18A|348174|C-type lectin domain family 18, member A##AK096051|CLEC18A|348174|C-type lectin domain family 18, member A##AK292860|PDXDC2P|283970|pyridoxal-dependent decarboxylase domain containing 2, pseudogene	0.999945	CTCF.p2:6:1.000
chr6	22737720	22737858	reg1020756.p1	7.320	+	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	-168064	+	X54394 X54393 GQ305133 M58594 NM_001163558	-434742	-	BC015850 NM_000948	-440060	-	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	1388641	+	AF181722 NM_181337	1619341	+	AF181721 NM_016356	1620490	-	NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1##AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2	0.713174	CTCF.p2:17:0.713
chr6	157367140	157367232	reg1016813.p2	7.319	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-267311	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-267902	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-267961	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	377398	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	378031	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	435353	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	0.997421	CTCF.p2:-8:0.997
chrX	56794140	56794282	reg1014461.p1	7.319	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-38520	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-204160	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-535301	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	227760	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	353717	-	BC071694 NM_019003	369846	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.740395	CTCF.p2:28:0.740
chr22	41842802	41842982	reg1018355.p1	7.318	+	TSC_hg19_v1_chr22_-_41842785 BC028919 AB051450 BC038957	-110	-	TSC_hg19_v1_chr22_-_41842432 CR456594	-437	-	TSC_hg19_v1_chr22_+_41777945 BC042476 NM_003216 BC039258 U44059 AK314906 AK295595 HM370396 CR456592 CU013192 CU013480 DQ890611 DQ893781 CR541827 CU691698 U06935	-64864	+	TSC_hg19_v1_chr22_-_41842881 NM_016272	47	-	AB489147 CU012956 CU013244 EU446678 TSC_hg19_v1_chr22_-_41864681 BC075808 CR456398 BC007321 NM_032758	21792	-	TSC_hg19_v1_chr22_+_41865120 AK293562 AK297213 AK301321 AK314845 AK302691 AK296260 BC026196 BC014092 NM_001098 U80040 CR456365 AB385022 CR536568 CU012932 CU013220 DQ893674 DQ895836	22239	+	BC028919|TOB2|10766|transducer of ERBB2, 2##AB051450|TOB2|10766|transducer of ERBB2, 2##BC038957|TOB2|10766|transducer of ERBB2, 2##CR456594|TOB2|10766|transducer of ERBB2, 2##BC042476|TEF|7008|thyrotrophic embryonic factor##NM_003216|TEF|7008|thyrotrophic embryonic factor##BC039258|TEF|7008|thyrotrophic embryonic factor##U44059|TEF|7008|thyrotrophic embryonic factor##AK314906|TEF|7008|thyrotrophic embryonic factor##AK295595|TEF|7008|thyrotrophic embryonic factor##HM370396|TEF|7008|thyrotrophic embryonic factor##CR456592|TEF|7008|thyrotrophic embryonic factor##CU013192|TEF|7008|thyrotrophic embryonic factor##CU013480|TEF|7008|thyrotrophic embryonic factor##DQ890611|TEF|7008|thyrotrophic embryonic factor##DQ893781|TEF|7008|thyrotrophic embryonic factor##CR541827|TEF|7008|thyrotrophic embryonic factor##U06935|TEF|7008|thyrotrophic embryonic factor##NM_016272|TOB2|10766|transducer of ERBB2, 2##CU012956|PHF5A|84844|PHD finger protein 5A##CU013244|PHF5A|84844|PHD finger protein 5A##EU446678|PHF5A|84844|PHD finger protein 5A##BC075808|PHF5A|84844|PHD finger protein 5A##CR456398|PHF5A|84844|PHD finger protein 5A##BC007321|PHF5A|84844|PHD finger protein 5A##NM_032758|PHF5A|84844|PHD finger protein 5A##AK293562|ACO2|50|aconitase 2, mitochondrial##AK297213|ACO2|50|aconitase 2, mitochondrial##AK301321|ACO2|50|aconitase 2, mitochondrial##AK314845|ACO2|50|aconitase 2, mitochondrial##AK302691|ACO2|50|aconitase 2, mitochondrial##AK296260|ACO2|50|aconitase 2, mitochondrial##BC026196|ACO2|50|aconitase 2, mitochondrial##BC014092|ACO2|50|aconitase 2, mitochondrial##NM_001098|ACO2|50|aconitase 2, mitochondrial##U80040|ACO2|50|aconitase 2, mitochondrial##CR456365|ACO2|50|aconitase 2, mitochondrial##CR536568|ACO2|50|aconitase 2, mitochondrial##CU012932|ACO2|50|aconitase 2, mitochondrial##CU013220|ACO2|50|aconitase 2, mitochondrial##DQ893674|ACO2|50|aconitase 2, mitochondrial##DQ895836|ACO2|50|aconitase 2, mitochondrial	0.0	
chr4	176875210	176875317	reg1017675.p1	7.318	+	BC032904 NM_201591	-141082	-	BC044612 BC053954 TSC_hg19_v1_chr4_-_176733905	-141357	-	BC010461 BC022508 TSC_hg19_v1_chr4_-_176733419 D49958	-141822	-	BC022528 TSC_hg19_v1_chr4_-_176923504	48231	-	AK226176 TSC_hg19_v1_chr4_-_176923545	48277	-	TSC_hg19_v1_chr4_-_176923575 NM_005277 NM_201592	48346	-	BC032904|GPM6A|2823|glycoprotein M6A##NM_201591|GPM6A|2823|glycoprotein M6A##BC044612|GPM6A|2823|glycoprotein M6A##BC053954|GPM6A|2823|glycoprotein M6A##BC010461|GPM6A|2823|glycoprotein M6A##BC022508|GPM6A|2823|glycoprotein M6A##D49958|GPM6A|2823|glycoprotein M6A##BC022528|GPM6A|2823|glycoprotein M6A##AK226176|GPM6A|2823|glycoprotein M6A##NM_005277|GPM6A|2823|glycoprotein M6A##NM_201592|GPM6A|2823|glycoprotein M6A	0.0	
chr6	107996378	107996504	reg1005277.p1	7.318	+	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	-185013	+	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	-215711	-	BC131628 NM_001080450	-560806	-	AK303562 AK074125 TSC_hg19_v1_chr6_-_108145518 AK093571 AX748208 NM_198081	149075	-	AF100141 CU690382 CU690568 BC001153 TSC_hg19_v1_chr6_-_108279282 AK074835	282816	-	TSC_hg19_v1_chr6_-_108279316 AJ011779	282871	-	NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AK303562|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK074125|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK093571|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_198081|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)##AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)	0.635449	CTCF.p2:12:0.635
chr10	6960422	6960572	reg1020772.p1	7.317	+	TSC_hg19_v1_chr10_+_6622460 AY007155	-338017	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	-338236	-	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-715621	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	490753	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	492937	-	AK027849 TSC_hg19_v1_chr10_-_7659249	698720	-	AY007155|LOC439949|439949|uncharacterized LOC439949##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.965166	CTCF.p2:-11:0.965
chr12	50677408	50677521	reg1018582.p1	7.317	+	BC136763 BC144402 BC144403 TSC_hg19_v1_chr12_-_50677266 AK000372 AK314447 AF198454 AL136911 AK222971 AB209512 BC110815 NM_001113546 NM_016357	-169	-	AF198455 AK297766 TSC_hg19_v1_chr12_-_50616438 NM_001113547	-61008	-	AK023649 AF157325 NM_001243775	-82155	-	BC054024 AL833333 NM_001145475	112933	-	NM_001170803 NM_001170804 NM_001170808 NM_052879 NM_199188 NM_199190 TSC_hg19_v1_chr12_+_50794671 AL832198 CR936626 AL833272 BC022377 BC063479 AF370416 AK291746 AY004310 AK055521 BX647457 CU687740 EU831655 EU831738 EU831909 EU832003	117228	+	TSC_hg19_v1_chr12_+_50869532 AF131755	192123	+	BC136763|LIMA1|51474|LIM domain and actin binding 1##BC144402|LIMA1|51474|LIM domain and actin binding 1##BC144403|LIMA1|51474|LIM domain and actin binding 1##AK000372|LIMA1|51474|LIM domain and actin binding 1##AK314447|LIMA1|51474|LIM domain and actin binding 1##AF198454|LIMA1|51474|LIM domain and actin binding 1##AL136911|LIMA1|51474|LIM domain and actin binding 1##AK222971|LIMA1|51474|LIM domain and actin binding 1##AB209512|LIMA1|51474|LIM domain and actin binding 1##BC110815|LIMA1|51474|LIM domain and actin binding 1##NM_001113546|LIMA1|51474|LIM domain and actin binding 1##NM_016357|LIMA1|51474|LIM domain and actin binding 1##AF198455|LIMA1|51474|LIM domain and actin binding 1##AK297766|LIMA1|51474|LIM domain and actin binding 1##NM_001113547|LIMA1|51474|LIM domain and actin binding 1##AK023649|LIMA1|51474|LIM domain and actin binding 1##AF157325|LIMA1|51474|LIM domain and actin binding 1##NM_001243775|LIMA1|51474|LIM domain and actin binding 1##BC054024|FAM186A|121006|family with sequence similarity 186, member A##AL833333|FAM186A|121006|family with sequence similarity 186, member A##NM_001145475|FAM186A|121006|family with sequence similarity 186, member A##NM_001170803|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_001170804|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_001170808|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_052879|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_199188|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_199190|LARP4|113251|La ribonucleoprotein domain family, member 4##AL832198|LARP4|113251|La ribonucleoprotein domain family, member 4##CR936626|LARP4|113251|La ribonucleoprotein domain family, member 4##AL833272|LARP4|113251|La ribonucleoprotein domain family, member 4##BC022377|LARP4|113251|La ribonucleoprotein domain family, member 4##BC063479|LARP4|113251|La ribonucleoprotein domain family, member 4##AF370416|LARP4|113251|La ribonucleoprotein domain family, member 4##AK291746|LARP4|113251|La ribonucleoprotein domain family, member 4##AY004310|LARP4|113251|La ribonucleoprotein domain family, member 4##AK055521|LARP4|113251|La ribonucleoprotein domain family, member 4##BX647457|LARP4|113251|La ribonucleoprotein domain family, member 4##EU831655|LARP4|113251|La ribonucleoprotein domain family, member 4##EU831738|LARP4|113251|La ribonucleoprotein domain family, member 4##EU831909|LARP4|113251|La ribonucleoprotein domain family, member 4##EU832003|LARP4|113251|La ribonucleoprotein domain family, member 4##AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4	0.0	
chr9	38433077	38433196	reg1017979.p1	7.316	+	TSC_hg19_v1_chr9_-_38424452 AB463783 NM_001007563	-8671	-	TSC_hg19_v1_chr9_+_38392760 AK297020 BC001619 AK225950	-40394	+	TSC_hg19_v1_chr9_+_38392698 AK313344	-40439	+	AB385522 AB095935 BC152434 NM_147195	187185	-	TSC_hg19_v1_chr9_-_38620602 BC056266	187487	-	AB385498 AK294281 AB051501 BC132737 BC144130 AK056833 NM_033655	855044	-	NM_001007563|IGFBPL1|347252|insulin-like growth factor binding protein-like 1##AK297020|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##BC001619|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK225950|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK313344|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AB095935|ANKRD18A|253650|ankyrin repeat domain 18A##BC152434|ANKRD18A|253650|ankyrin repeat domain 18A##NM_147195|ANKRD18A|253650|ankyrin repeat domain 18A##BC056266|ANKRD18A|253650|ankyrin repeat domain 18A##AK294281|CNTNAP3|79937|contactin associated protein-like 3##AB051501|CNTNAP3|79937|contactin associated protein-like 3##BC132737|CNTNAP3|79937|contactin associated protein-like 3##BC144130|CNTNAP3|79937|contactin associated protein-like 3##AK056833|CNTNAP3|79937|contactin associated protein-like 3##NM_033655|CNTNAP3|79937|contactin associated protein-like 3	0.720489	CTCF.p2:-18:0.720
chr12	21103298	21103466	reg1018498.p2	7.315	+	BC058006 BC105597 NM_019844 BC022843 AK055874 BC070264	-139734	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	-254887	+	AK308317 NM_001244683	-378585	+	AF401642 NM_001009562	65247	+	BC020696 NM_006446 BC070172 AB026257 BC114376 BC054878 BC105596 AK312970	180754	+	NM_021094 AK296044	384450	-	BC058006|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC105597|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_019844|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC022843|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##AK055874|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC070264|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AF401642|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)##NM_001009562|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)##BC020696|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##NM_006446|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC070172|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AB026257|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC114376|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC054878|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC105596|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AK312970|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##NM_021094|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2##AK296044|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2	0.958165	CTCF.p2:-12:0.958
chr12	53715416	53715545	reg1017744.p2	7.315	+	TSC_hg19_v1_chr12_-_53715374 AK293342 BC000659 BC018836 AY237818 NM_001173466 NM_015665	-103	-	BT006912 DQ893306 DQ893864 TSC_hg19_v1_chr12_-_53715341 AF226048 AJ289857 AK000833 AK222509	-186	-	TSC_hg19_v1_chr12_-_53715042 AK094302	-418	-	AB527932 EU446563 BC101549 BC113613 AY150673 AF477981 NM_152860 AF466179	14003	-	AY150674 NM_001173467	14523	-	TSC_hg19_v1_chr12_+_53773935 BC062539 NM_001251825 NM_138473 AF255682 AJ272134	58510	+	AK293342|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BC000659|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BC018836|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AY237818|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##NM_001173466|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##NM_015665|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BT006912|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##DQ893306|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##DQ893864|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AF226048|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AJ289857|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AK000833|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AK222509|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AK094302|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##EU446563|SP7|121340|Sp7 transcription factor##BC101549|SP7|121340|Sp7 transcription factor##BC113613|SP7|121340|Sp7 transcription factor##AY150673|SP7|121340|Sp7 transcription factor##AF477981|SP7|121340|Sp7 transcription factor##NM_152860|SP7|121340|Sp7 transcription factor##AF466179|SP7|121340|Sp7 transcription factor##AY150674|SP7|121340|Sp7 transcription factor##NM_001173467|SP7|121340|Sp7 transcription factor##BC062539|SP1|6667|Sp1 transcription factor##NM_001251825|SP1|6667|Sp1 transcription factor##NM_138473|SP1|6667|Sp1 transcription factor##AF255682|SP1|6667|Sp1 transcription factor##AJ272134|SP1|6667|Sp1 transcription factor	0.992426	CTCF.p2:-9:0.992
chr16	1105204	1105359	reg1018246.p1	7.315	+	TSC_hg19_v1_chr16_+_1032063 AK024491	-73207	+	BC031797 NM_014587 TSC_hg19_v1_chr16_+_1031808 AB464249 AF226675	-73417	+	AK022743 AK225065 AK294329 TSC_hg19_v1_chr16_-_1020985 NM_022773	-84258	-	NM_001172560	17474	+	AK308381 NM_001053 AB528240 DQ448303 DQ448304	23543	+	AY358832 NM_207419	40962	-	AK024491|SOX8|30812|SRY (sex determining region Y)-box 8##BC031797|SOX8|30812|SRY (sex determining region Y)-box 8##NM_014587|SOX8|30812|SRY (sex determining region Y)-box 8##AF226675|SOX8|30812|SRY (sex determining region Y)-box 8##AK022743|LMF1|64788|lipase maturation factor 1##AK225065|LMF1|64788|lipase maturation factor 1##AK294329|LMF1|64788|lipase maturation factor 1##NM_022773|LMF1|64788|lipase maturation factor 1##NM_001172560|SSTR5|6755|somatostatin receptor 5##AK308381|SSTR5|6755|somatostatin receptor 5##NM_001053|SSTR5|6755|somatostatin receptor 5##DQ448303|SSTR5|6755|somatostatin receptor 5##DQ448304|SSTR5|6755|somatostatin receptor 5##AY358832|C1QTNF8|390664|C1q and tumor necrosis factor related protein 8##NM_207419|C1QTNF8|390664|C1q and tumor necrosis factor related protein 8	0.970115	CTCF.p2:-5:0.970
chrX	30612064	30612168	reg1018937.p1	7.315	+	TSC_hg19_v1_chrX_-_30595884 AK021639 BC020611 NM_025159	-16159	-	HQ692832 AB464646 BC011564 NM_000475	-284630	-	NM_177404 BC013772	-346820	+	TSC_hg19_v1_chrX_+_30671493 BC042421 BC071595 NM_000167 NM_001128127 NM_001205019 NM_203391	59378	+	TSC_hg19_v1_chrX_+_30671539 AK313215	59426	+	TSC_hg19_v1_chrX_+_30671612 L13943 AK294938 AK294304 BX647604 AK308238 BC037549 CU688226 DQ891580 DQ894773	59512	+	AK021639|CXorf21|80231|chromosome X open reading frame 21##BC020611|CXorf21|80231|chromosome X open reading frame 21##NM_025159|CXorf21|80231|chromosome X open reading frame 21##HQ692832|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##BC011564|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_000475|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_177404|MAGEB1|4112|melanoma antigen family B, 1##BC013772|MAGEB1|4112|melanoma antigen family B, 1##BC042421|GK|2710|glycerol kinase##BC071595|GK|2710|glycerol kinase##NM_000167|GK|2710|glycerol kinase##NM_001128127|GK|2710|glycerol kinase##NM_001205019|GK|2710|glycerol kinase##NM_203391|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase##L13943|GK|2710|glycerol kinase##AK294938|GK|2710|glycerol kinase##AK294304|GK|2710|glycerol kinase##BX647604|GK|2710|glycerol kinase##AK308238|GK|2710|glycerol kinase##BC037549|GK|2710|glycerol kinase##DQ891580|GK|2710|glycerol kinase##DQ894773|GK|2710|glycerol kinase	0.461996	CTCF.p2:8:0.462
chr11	65021574	65021675	reg1018409.p2	7.314	+	AK131327 NM_001004326 BC146850	-40310	+	TSC_hg19_v1_chr11_+_64949413 BC017200	-72185	+	TSC_hg19_v1_chr11_+_64949398 AK301538	-72223	+	TSC_hg19_v1_chr11_+_65029432 AK309284 BC001347 BC002990 BC018813 BC018814 NM_002689 AK297842 AK307831 AK025315	7782	+	NM_006779 TSC_hg19_v1_chr11_+_65082336 AF001436 AF163840 AK315444 BC075834	60713	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	79660	+	AK131327|SLC22A20|440044|solute carrier family 22, member 20##NM_001004326|SLC22A20|440044|solute carrier family 22, member 20##BC146850|SLC22A20|440044|solute carrier family 22, member 20##BC017200|CAPN1|823|calpain 1, (mu/I) large subunit##AK301538|CAPN1|823|calpain 1, (mu/I) large subunit##AK309284|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC001347|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC002990|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018813|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018814|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_002689|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK297842|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK307831|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK025315|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_006779|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF001436|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF163840|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AK315444|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##BC075834|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2	0.997981	CTCF.p2:8:0.987
chr2	10282611	10282730	reg1022177.p1	7.314	+	BC093999 BC094001 NM_182626	-691	+	TSC_hg19_v1_chr2_+_10262865 NM_001034 AK092671 AK123010 AK313719 BC030154 BC001886 DQ891863 DQ895052 AB529158	-19781	+	NM_001165931 S40301 X59618 TSC_hg19_v1_chr2_+_10262805	-19911	+	TSC_hg19_v1_chr2_+_10443043 BC017482 NM_002149 BC009846 BC017028	160379	+	AK000596 NM_134421	161155	+	D28365 BC014562 BC025296 X55362 TSC_hg19_v1_chr2_-_10588440	305690	-	BC093999|C2orf48|348738|chromosome 2 open reading frame 48##BC094001|C2orf48|348738|chromosome 2 open reading frame 48##NM_182626|C2orf48|348738|chromosome 2 open reading frame 48##NM_001034|RRM2|6241|ribonucleotide reductase M2##AK092671|RRM2|6241|ribonucleotide reductase M2##AK123010|RRM2|6241|ribonucleotide reductase M2##AK313719|RRM2|6241|ribonucleotide reductase M2##BC030154|RRM2|6241|ribonucleotide reductase M2##BC001886|RRM2|6241|ribonucleotide reductase M2##DQ891863|RRM2|6241|ribonucleotide reductase M2##DQ895052|RRM2|6241|ribonucleotide reductase M2##NM_001165931|RRM2|6241|ribonucleotide reductase M2##S40301|RRM2|6241|ribonucleotide reductase M2##X59618|RRM2|6241|ribonucleotide reductase M2##BC017482|HPCAL1|3241|hippocalcin-like 1##NM_002149|HPCAL1|3241|hippocalcin-like 1##BC009846|HPCAL1|3241|hippocalcin-like 1##BC017028|HPCAL1|3241|hippocalcin-like 1##AK000596|HPCAL1|3241|hippocalcin-like 1##NM_134421|HPCAL1|3241|hippocalcin-like 1##D28365|ODC1|4953|ornithine decarboxylase 1##BC014562|ODC1|4953|ornithine decarboxylase 1##BC025296|ODC1|4953|ornithine decarboxylase 1##X55362|ODC1|4953|ornithine decarboxylase 1	0.0	
chr18	75612156	75612257	reg1017282.p2	7.313	+	TSC_hg19_v1_chr18_+_74961925 NM_001480	-650240	+	TSC_hg19_v1_chr18_-_74844774 NM_001025100 NM_001025101	-767427	-	TSC_hg19_v1_chr18_-_74844720 BC065248 AB208986 L18865	-767489	-	BC016792 TSC_hg19_v1_chr18_-_75705702	93486	-	BC129827 BC148296 NM_171999	1128068	+	BC036473 TSC_hg19_v1_chr18_+_76829395 AK308291 BC022535 BC125219 BC125220 NM_198531 AK093704 AX748269 AK295981	1217193	+	NM_001480|GALR1|2587|galanin receptor 1##NM_001025100|MBP|4155|myelin basic protein##NM_001025101|MBP|4155|myelin basic protein##BC065248|MBP|4155|myelin basic protein##AB208986|MBP|4155|myelin basic protein##L18865|MBP|4155|myelin basic protein##BC148296|SALL3|27164|sal-like 3 (Drosophila)##NM_171999|SALL3|27164|sal-like 3 (Drosophila)##BC036473|ATP9B|374868|ATPase, class II, type 9B##AK308291|ATP9B|374868|ATPase, class II, type 9B##BC022535|ATP9B|374868|ATPase, class II, type 9B##BC125219|ATP9B|374868|ATPase, class II, type 9B##BC125220|ATP9B|374868|ATPase, class II, type 9B##NM_198531|ATP9B|374868|ATPase, class II, type 9B##AK093704|ATP9B|374868|ATPase, class II, type 9B##AK295981|ATP9B|374868|ATPase, class II, type 9B	0.996039	CTCF.p2:39:0.996
chr19	42502760	42502898	reg1022355.p1	7.313	+	TSC_hg19_v1_chr19_-_42498383 BC009282 BC009394 BC015566 BC013763 AK307921 AK316069 AK223569 AK293784 AK295078 NM_152296	-4457	-	AK295833 TSC_hg19_v1_chr19_-_42498254	-4592	-	TSC_hg19_v1_chr19_-_42463500 NM_006423	-39309	-	S40369 AJ249209 BC131717 NM_002088	67109	-	TSC_hg19_v1_chr19_+_42580286 NM_022752	77453	+	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	77537	+	BC009282|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC009394|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC015566|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC013763|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK307921|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK316069|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK223569|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK293784|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK295078|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##NM_152296|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK295833|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)##S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_022752|ZNF574|64763|zinc finger protein 574##AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574	0.668756	CTCF.p2:7:0.669
chr3	160131560	160131684	reg1015203.p2	7.313	+	NM_005496 AL136877	-13258	+	TSC_hg19_v1_chr3_+_160117456 BC065259 AL833949 BC001557	-14151	+	BC106033 TSC_hg19_v1_chr3_+_160117423 NM_001002800 AK002200 AK128143 AK225437 AK315070 BC070161 AB019987 AK307508	-14192	+	TSC_hg19_v1_chr3_-_160167549 AK291284	35915	-	TSC_hg19_v1_chr3_-_160167605 BC109259 BC109260 BC033011 BC068444 AY159379 NM_173084	36001	-	CU689904 AB002533 DQ890866 DQ894021 TSC_hg19_v1_chr3_-_160283092	151472	-	NM_005496|SMC4|10051|structural maintenance of chromosomes 4##AL136877|SMC4|10051|structural maintenance of chromosomes 4##BC065259|SMC4|10051|structural maintenance of chromosomes 4##AL833949|SMC4|10051|structural maintenance of chromosomes 4##BC001557|SMC4|10051|structural maintenance of chromosomes 4##BC106033|SMC4|10051|structural maintenance of chromosomes 4##NM_001002800|SMC4|10051|structural maintenance of chromosomes 4##AK002200|SMC4|10051|structural maintenance of chromosomes 4##AK128143|SMC4|10051|structural maintenance of chromosomes 4##AK225437|SMC4|10051|structural maintenance of chromosomes 4##AK315070|SMC4|10051|structural maintenance of chromosomes 4##BC070161|SMC4|10051|structural maintenance of chromosomes 4##AB019987|SMC4|10051|structural maintenance of chromosomes 4##AK307508|SMC4|10051|structural maintenance of chromosomes 4##AK291284|TRIM59|286827|tripartite motif containing 59##BC109259|TRIM59|286827|tripartite motif containing 59##BC109260|TRIM59|286827|tripartite motif containing 59##AY159379|TRIM59|286827|tripartite motif containing 59##NM_173084|TRIM59|286827|tripartite motif containing 59##AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	0.989822	CTCF.p2:0:0.990
chr4	17818820	17818943	reg1016550.p1	7.313	+	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-6270	+	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	-6608	-	BC050697 TSC_hg19_v1_chr4_-_17806917	-12013	-	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	204585	-	AB017168 NM_004787 BC117190 BC143978 AF133270	2436455	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	2883186	+	AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16##BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16##AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like	0.0	
chr10	133672611	133672718	reg1019800.p1	7.312	+	BC042951 NM_174937 TSC_hg19_v1_chr10_-_133110013	-562663	-	TSC_hg19_v1_chr10_-_133109808 BC093639 BC101535	-562844	-	TSC_hg19_v1_chr10_+_131934681 AJ010841 AB463691	-1737949	+	CU692440 AB528671 U15174 BC009342 BC080643 TSC_hg19_v1_chr10_-_133795428 AK222626 AK295136 BC021989 AF002697 NM_004052	122712	-	TSC_hg19_v1_chr10_-_133795461 BC067818	122805	-	NM_001105521	245648	+	BC042951|TCERG1L|256536|transcription elongation regulator 1-like##NM_174937|TCERG1L|256536|transcription elongation regulator 1-like##BC093639|TCERG1L|256536|transcription elongation regulator 1-like##BC101535|TCERG1L|256536|transcription elongation regulator 1-like##AJ010841|GLRX3|10539|glutaredoxin 3##U15174|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC009342|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC080643|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK222626|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK295136|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC021989|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AF002697|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_004052|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC067818|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_001105521|JAKMIP3|282973|Janus kinase and microtubule interacting protein 3	0.830066	CTCF.p2:0:0.830
chr12	103386100	103386281	reg1020058.p1	7.312	+	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-34098	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-34669	+	L47726 NM_000277 U49897	-74810	-	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	503556	-	AY311388 AJ295695 NM_017564 AB052958	594871	+	AB032773 TSC_hg19_v1_chr12_-_104234857	848634	-	DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3	0.018413	
chr13	41649338	41649473	reg1020850.p1	7.312	+	TSC_hg19_v1_chr13_+_41635650 AK000979 AK314525 AK001557 AK297536 BC108310 NM_007187 BC104879	-13718	+	BX640798 TSC_hg19_v1_chr13_-_41635093	-14320	-	TSC_hg19_v1_chr13_-_41593499 NM_172373	-55906	-	AL833839 EU832523 EU832605 BC051349 TSC_hg19_v1_chr13_-_41706883 BC000560 AK056633 AK299627 AK096608 NM_152903	57390	-	CR533558 CU692470 AB464601 AM393035 AM393575 DQ890838 DQ893994 TSC_hg19_v1_chr13_-_41768505	119052	-	TSC_hg19_v1_chr13_-_41768706 AK299614 AL136782 AK315589 BC022033 FJ150424 NM_032138 AK091344 AX746923	119220	-	AK000979|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##AK314525|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##AK001557|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##AK297536|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##BC108310|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##NM_007187|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##BC104879|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##BX640798|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##AL833839|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##EU832523|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##EU832605|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##BC051349|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##BC000560|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##AK056633|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##AK299627|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##AK096608|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##NM_152903|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##CR533558|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AM393035|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AM393575|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##DQ890838|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##DQ893994|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK299614|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AL136782|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK315589|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##BC022033|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##FJ150424|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_032138|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK091344|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7	0.917522	CTCF.p2:-22:0.918
chr19	12476766	12476879	reg1018859.p2	7.312	+	AK024418 AK295923 NM_030824	-362	-	AK313755 BC022523 AK092116 AX747362 NM_145276	-32338	-	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	-71170	-	TSC_hg19_v1_chr19_-_12512035 BC057831 NM_001080821	35232	-	AK299532 TSC_hg19_v1_chr19_-_12551771	74944	-	AK023025 BC032753 TSC_hg19_v1_chr19_-_12551836 AB011414 NM_005815	75044	-	AK024418|ZNF442|79973|zinc finger protein 442##AK295923|ZNF442|79973|zinc finger protein 442##NM_030824|ZNF442|79973|zinc finger protein 442##AK313755|ZNF563|147837|zinc finger protein 563##BC022523|ZNF563|147837|zinc finger protein 563##AK092116|ZNF563|147837|zinc finger protein 563##NM_145276|ZNF563|147837|zinc finger protein 563##BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44##NM_001080821|ZNF799|90576|zinc finger protein 799##AK299532|ZNF443|10224|zinc finger protein 443##AK023025|ZNF443|10224|zinc finger protein 443##BC032753|ZNF443|10224|zinc finger protein 443##AB011414|ZNF443|10224|zinc finger protein 443##NM_005815|ZNF443|10224|zinc finger protein 443	0.031856	
chr2	231975388	231975544	reg1019587.p2	7.312	+	TSC_hg19_v1_chr2_+_231921625 BC020223 BC007535 BC073833 BC039845 BC047897 D44466 AB590660	-53786	+	BC014013 TSC_hg19_v1_chr2_+_231921608 BC005036 BC032445 BC112344 BC114434 AK312528 BC001053 AK307513	-53850	+	TSC_hg19_v1_chr2_+_231921606 BC064398	-53865	+	AK313741 BC063123 NM_000867	14323	-	TSC_hg19_v1_chr2_+_232063340 NM_025139 BX537956 AK309395	87889	+	AY219922 TSC_hg19_v1_chr2_+_232063378	87912	+	BC020223|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC007535|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC073833|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC039845|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC047897|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##D44466|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC014013|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC032445|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC112344|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC114434|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK312528|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC001053|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307513|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC064398|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK313741|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B##BC063123|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B##NM_000867|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B##NM_025139|ARMC9|80210|armadillo repeat containing 9##BX537956|ARMC9|80210|armadillo repeat containing 9##AK309395|ARMC9|80210|armadillo repeat containing 9##AY219922|ARMC9|80210|armadillo repeat containing 9	0.225743	CTCF.p2:-40:0.226
chr14	94598739	94598875	reg1019056.p1	7.311	+	TSC_hg19_v1_chr14_-_94595942 NM_032036	-2867	-	BC032626 TSC_hg19_v1_chr14_-_94595922 AF208232	-2889	-	NM_001130080 NM_005532 TSC_hg19_v1_chr14_+_94577081 AK289535 AK097084 AK312089 BX647330 AJ294851 AY126456 AY126457 AY126458 BC015492	-21688	+	NM_020958 NM_058237 BC002650 BC068491 AB046842 AB385489 CU686649	41917	+	AF181467 NM_016186	160553	-	TSC_hg19_v1_chr14_-_94759564 AY358597 AK314877	160755	-	NM_032036|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2##BC032626|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2##AF208232|IFI27L2|83982|interferon, alpha-inducible protein 27-like 2##NM_001130080|IFI27|3429|interferon, alpha-inducible protein 27##NM_005532|IFI27|3429|interferon, alpha-inducible protein 27##AK289535|IFI27|3429|interferon, alpha-inducible protein 27##AK097084|IFI27|3429|interferon, alpha-inducible protein 27##AK312089|IFI27|3429|interferon, alpha-inducible protein 27##BX647330|IFI27|3429|interferon, alpha-inducible protein 27##AJ294851|IFI27|3429|interferon, alpha-inducible protein 27##AY126456|IFI27|3429|interferon, alpha-inducible protein 27##AY126457|IFI27|3429|interferon, alpha-inducible protein 27##AY126458|IFI27|3429|interferon, alpha-inducible protein 27##BC015492|IFI27|3429|interferon, alpha-inducible protein 27##NM_020958|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##NM_058237|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##BC002650|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##BC068491|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##AB046842|PPP4R4|57718|protein phosphatase 4, regulatory subunit 4##AF181467|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##NM_016186|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##AY358597|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##AK314877|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10	0.903165	CTCF.p2:6:0.903
chr18	55578161	55578276	reg1019923.p2	7.311	+	TSC_hg19_v1_chr18_-_55470548 NM_005603	-107748	-	NM_001242804 BC040476	-280661	+	TSC_hg19_v1_chr18_-_55289034 AK293985 NM_004539	-289117	-	TSC_hg19_v1_chr18_+_55711515 NM_001144967 NM_001243960 NM_015277	133318	+	TSC_hg19_v1_chr18_+_55711771 AB071179	133566	+	DQ890913 DQ893350 AY312514 TSC_hg19_v1_chr18_+_55711911	133688	+	NM_005603|ATP8B1|5205|ATPase, aminophospholipid transporter, class I, type 8B, member 1##NM_001242804|LOC100505549|100505549|uncharacterized LOC100505549##BC040476|LOC100505549|100505549|uncharacterized LOC100505549##AK293985|NARS|4677|asparaginyl-tRNA synthetase##NM_004539|NARS|4677|asparaginyl-tRNA synthetase##NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001243960|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB071179|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.998376	CTCF.p2:12:0.998
chrX	21498123	21498247	reg1020798.p1	7.311	+	TSC_hg19_v1_chrX_+_21392535 NM_001168647 NM_001168648 NM_001168649 NM_014927 AB020709 AK294728	-105677	+	TSC_hg19_v1_chrX_-_20285141 AK294373	-1213021	-	TSC_hg19_v1_chrX_-_20285001 AB208933	-1213228	-	BC109031 AK092279 AX747450 NM_153270	178246	-	BC005948 AF129505 AJ250584 NM_014332 AK312134	278032	-	NM_015884 TSC_hg19_v1_chrX_+_21857734	359514	+	NM_001168647|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168648|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168649|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_014927|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AB020709|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AK294728|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AK294373|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AB208933|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC109031|KLHL34|257240|kelch-like 34 (Drosophila)##AK092279|KLHL34|257240|kelch-like 34 (Drosophila)##NM_153270|KLHL34|257240|kelch-like 34 (Drosophila)##BC005948|SMPX|23676|small muscle protein, X-linked##AF129505|SMPX|23676|small muscle protein, X-linked##AJ250584|SMPX|23676|small muscle protein, X-linked##NM_014332|SMPX|23676|small muscle protein, X-linked##AK312134|SMPX|23676|small muscle protein, X-linked##NM_015884|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2	0.716202	CTCF.p2:14:0.716
chr8	896918	897044	reg1019061.p1	7.310	+	AK290264 TSC_hg19_v1_chr8_-_681225 BC046243 NM_207332	-215750	-	TSC_hg19_v1_chr8_-_681204 AK297476	-215770	-	TSC_hg19_v1_chr8_-_681182 EU832095 EU832187 AF161437	-215801	-	AF119818 AF119817 NM_004745	552568	+	NM_018941 TSC_hg19_v1_chr8_+_1711937 AK312486 AF123757 AF123758 AF123759 AF123760 AF123761	814929	+	TSC_hg19_v1_chr8_+_1712012 BC007725	815055	+	AK290264|ERICH1|157697|glutamate-rich 1##BC046243|ERICH1|157697|glutamate-rich 1##NM_207332|ERICH1|157697|glutamate-rich 1##AK297476|ERICH1|157697|glutamate-rich 1##EU832095|ERICH1|157697|glutamate-rich 1##EU832187|ERICH1|157697|glutamate-rich 1##AF161437|ERICH1|157697|glutamate-rich 1##AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##NM_018941|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AK312486|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123757|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123758|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123759|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123760|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123761|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##BC007725|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)	0.994796	CTCF.p2:7:0.995
chr20	62066332	62066468	reg1019292.p1	7.309	+	X89741 Y08421 AB590558 AK314907 TSC_hg19_v1_chr20_-_61992648 BC096290 BC096291 BC096292 BC096293 L35901 NM_000744 U62433	-73769	-	BC043183 NM_020882 BC041767	-141844	+	AK123367 TSC_hg19_v1_chr20_+_61915676	-150725	+	BT007043 AB527167 Y15065 BC000699 AF110020 TSC_hg19_v1_chr20_-_62104002 AK293727 AF033348 AF074247 D82346 NM_004518 NM_172106 NM_172107 NM_172108 NM_172109	37529	-	TSC_hg19_v1_chr20_-_62130437 X70940 AK307536 NM_001958 BC110409	64113	-	TSC_hg19_v1_chr20_+_62152117 BC002531 NM_024299 AK024699 AK311318	85733	+	X89741|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##Y08421|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##AK314907|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096290|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096291|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096292|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096293|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##L35901|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##NM_000744|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##U62433|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC043183|COL20A1|57642|collagen, type XX, alpha 1##NM_020882|COL20A1|57642|collagen, type XX, alpha 1##BC041767|COL20A1|57642|collagen, type XX, alpha 1##AK123367|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##BT007043|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##Y15065|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##BC000699|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF110020|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AK293727|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF033348|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF074247|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##D82346|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_004518|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172106|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172107|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172108|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172109|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##X70940|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##AK307536|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##NM_001958|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC110409|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	0.571466	CTCF.p2:7:0.571
chr7	130516733	130516872	reg1019360.p1	7.309	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-97875	-	AF294347 AF431815 BC038415 NM_052933	-145447	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-163207	-	TSC_hg19_v1_chr7_-_130792857 BC047367	276057	-	AK294384 NM_001145354	278052	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	495804	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.858913	CTCF.p2:18:0.859
chr20	45834444	45834559	reg1019168.p1	7.308	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	-310949	+	TSC_hg19_v1_chr20_+_45523505 BC008803	-310993	+	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	-311219	+	TSC_hg19_v1_chr20_-_45927496 BC030721	93068	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	142146	-	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	150987	-	AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8	0.226024	CTCF.p2:2:0.226
chr3	52419348	52419462	reg1018816.p1	7.308	+	AB037831 AB290163 NM_015512	-69071	+	TSC_hg19_v1_chr3_+_52321862 BC042151 BC021896	-97531	+	AF448855 AY172690 BC036862 NM_001144951 NM_145262 TSC_hg19_v1_chr3_+_52321852 AK074215	-97562	+	CU674778 D88812 DQ892545 DQ895756 AF045581 TSC_hg19_v1_chr3_-_52443999 BC001596 NM_004656	24549	-	TSC_hg19_v1_chr3_-_52444016 D87462	24611	-	TSC_hg19_v1_chr3_-_52444050 AK292608	24643	-	AB037831|DNAH1|25981|dynein, axonemal, heavy chain 1##AB290163|DNAH1|25981|dynein, axonemal, heavy chain 1##NM_015512|DNAH1|25981|dynein, axonemal, heavy chain 1##BC042151|GLYCTK|132158|glycerate kinase##BC021896|GLYCTK|132158|glycerate kinase##AF448855|GLYCTK|132158|glycerate kinase##AY172690|GLYCTK|132158|glycerate kinase##BC036862|GLYCTK|132158|glycerate kinase##NM_001144951|GLYCTK|132158|glycerate kinase##NM_145262|GLYCTK|132158|glycerate kinase##AK074215|GLYCTK|132158|glycerate kinase##D88812|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##DQ892545|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##DQ895756|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##AF045581|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##BC001596|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##NM_004656|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##D87462|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##AK292608|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)	0.564677	CTCF.p2:9:0.565
chr6_ssto_hap7	2499827	2499932	reg1018790.p1	7.308	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr7	5717748	5717886	reg1020937.p1	7.308	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	-85307	+	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	-85379	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-147608	-	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	103405	-	BC004947 TSC_hg19_v1_chr7_-_5821284 AK297231 BC063825 AK092767 AX747717 AK297416 BX537406 NM_207111 NM_207116 AK292396	103492	-	TSC_hg19_v1_chr7_+_5862791 AK291169 AK096288	144968	+	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216##BC004947|RNF216|54476|ring finger protein 216##AK297231|RNF216|54476|ring finger protein 216##BC063825|RNF216|54476|ring finger protein 216##AK092767|RNF216|54476|ring finger protein 216##AK297416|RNF216|54476|ring finger protein 216##BX537406|RNF216|54476|ring finger protein 216##NM_207111|RNF216|54476|ring finger protein 216##NM_207116|RNF216|54476|ring finger protein 216##AK292396|RNF216|54476|ring finger protein 216##AK291169|ZNF815|401303|zinc finger protein 815##AK096288|ZNF815|401303|zinc finger protein 815	0.771588	CTCF.p2:13:0.680
chr9	85221774	85221917	reg1020320.p1	7.308	+	AK128831 NM_001001670	-618159	+	NM_207416 AK308327	-663402	+	NM_001145197 AK125847 AK308327	-678474	+	AK290986 TSC_hg19_v1_chr9_-_85677861	455980	-	BC023566 NM_152573 TSC_hg19_v1_chr9_-_85678058 AK056176	456221	-	GQ129452 BC023560 NM_001244962	660302	-	AK128831|FAM75D1|389763|family with sequence similarity 75, member D1##NM_001001670|FAM75D1|389763|family with sequence similarity 75, member D1##NM_207416|FAM75D3|389762|family with sequence similarity 75, member D3##AK308327|FAM75D4|389761|family with sequence similarity 75, member D4##NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4##AK125847|FAM75D4|389761|family with sequence similarity 75, member D4##AK308327|FAM75D4|389761|family with sequence similarity 75, member D4##AK290986|RASEF|158158|RAS and EF-hand domain containing##BC023566|RASEF|158158|RAS and EF-hand domain containing##NM_152573|RASEF|158158|RAS and EF-hand domain containing##AK056176|RASEF|158158|RAS and EF-hand domain containing##GQ129452|FRMD3|257019|FERM domain containing 3##BC023560|FRMD3|257019|FERM domain containing 3##NM_001244962|FRMD3|257019|FERM domain containing 3	0.932861	CTCF.p2:17:0.933
chr2	210288545	210288656	reg1019311.p1	7.307	+	BC036811 NM_005048 U25128 HQ257935 AY497546	-1016939	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-1063975	+	TSC_hg19_v1_chr2_+_209131083 AK127769	-1157517	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	154	+	BC110423 TSC_hg19_v1_chr2_+_210444185	155570	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	155794	+	BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##AK294181|PTH2R|5746|parathyroid hormone 2 receptor##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC110423|MAP2|4133|microtubule-associated protein 2##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2	0.125062	
chr22	35807162	35807292	reg1019724.p1	7.306	+	TSC_hg19_v1_chr22_+_35796295 AB463121 CU013117 CU013405 CU674060 CU678562	-10865	+	TSC_hg19_v1_chr22_+_35796157 BC000142 AK308343 CR456517 X74795 BC003656	-11056	+	TSC_hg19_v1_chr22_+_35796134 NM_006739 AK223323 AK301121 D83986 AK130620 AK291136 AK298624 AK122853 AK312533	-11102	+	TSC_hg19_v1_chr22_+_35936902 AX721069	129675	+	BC013419 NM_014310 CR456477	130166	+	CR541949 CU013116 CU013404 DQ893679 DQ896050 AB528844 CR456516 TSC_hg19_v1_chr22_-_36013480 AK300657 BC014547 NM_005368 AK314057 NM_203378	206201	-	CU013117|MCM5|4174|minichromosome maintenance complex component 5##CU013405|MCM5|4174|minichromosome maintenance complex component 5##BC000142|MCM5|4174|minichromosome maintenance complex component 5##AK308343|MCM5|4174|minichromosome maintenance complex component 5##CR456517|MCM5|4174|minichromosome maintenance complex component 5##X74795|MCM5|4174|minichromosome maintenance complex component 5##BC003656|MCM5|4174|minichromosome maintenance complex component 5##NM_006739|MCM5|4174|minichromosome maintenance complex component 5##AK223323|MCM5|4174|minichromosome maintenance complex component 5##AK301121|MCM5|4174|minichromosome maintenance complex component 5##D83986|MCM5|4174|minichromosome maintenance complex component 5##AK130620|MCM5|4174|minichromosome maintenance complex component 5##AK291136|MCM5|4174|minichromosome maintenance complex component 5##AK298624|MCM5|4174|minichromosome maintenance complex component 5##AK122853|MCM5|4174|minichromosome maintenance complex component 5##AK312533|MCM5|4174|minichromosome maintenance complex component 5##BC013419|RASD2|23551|RASD family, member 2##NM_014310|RASD2|23551|RASD family, member 2##CR456477|RASD2|23551|RASD family, member 2##CR541949|MB|4151|myoglobin##CU013116|MB|4151|myoglobin##CU013404|MB|4151|myoglobin##DQ893679|MB|4151|myoglobin##DQ896050|MB|4151|myoglobin##CR456516|MB|4151|myoglobin##AK300657|MB|4151|myoglobin##BC014547|MB|4151|myoglobin##NM_005368|MB|4151|myoglobin##AK314057|MB|4151|myoglobin##NM_203378|MB|4151|myoglobin	0.0	
chr5	114125607	114125719	reg1016990.p1	7.306	+	BC015371 NM_170775 BC040722	-356414	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	-427202	+	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	-427614	+	TSC_hg19_v1_chr5_-_114505606 AK316422 AK296389	379941	-	AB196558 AJ272269 BC130334 AK125426 BC045164 BC046096 NM_001017397 NM_001017398 NM_018700	390324	-	AY780790 AB590094 TSC_hg19_v1_chr5_-_114598563 NM_005023	472903	-	BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK316422|TRIM36|55521|tripartite motif containing 36##AK296389|TRIM36|55521|tripartite motif containing 36##AB196558|TRIM36|55521|tripartite motif containing 36##AJ272269|TRIM36|55521|tripartite motif containing 36##BC130334|TRIM36|55521|tripartite motif containing 36##AK125426|TRIM36|55521|tripartite motif containing 36##BC045164|TRIM36|55521|tripartite motif containing 36##BC046096|TRIM36|55521|tripartite motif containing 36##NM_001017397|TRIM36|55521|tripartite motif containing 36##NM_001017398|TRIM36|55521|tripartite motif containing 36##NM_018700|TRIM36|55521|tripartite motif containing 36##AY780790|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##NM_005023|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit	0.827319	CTCF.p2:1:0.827
chr6_cox_hap2	2880159	2880282	reg1020445.p1	7.306	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr14	92378008	92378138	reg1017291.p1	7.305	+	AK093876 AX748346 NM_001128596 TSC_hg19_v1_chr14_-_92333881	-44205	-	TSC_hg19_v1_chr14_-_92302762 BC040503 BX647828 AK126359 NM_001128595 NM_152332	-75281	-	BC126214 BC126216 AK126034 NM_024764	-179676	-	AF112152 AF093118 BX248290 BC022280 TSC_hg19_v1_chr14_-_92413757 AK075147	35701	-	TSC_hg19_v1_chr14_-_92414010 AY358898 NM_006329	35951	-	BC146845 AF007217 BC002656 BC069008 TSC_hg19_v1_chr14_-_92506382 Y12490 BC142956 AK307489 NM_004239	128277	-	AK093876|TC2N|123036|tandem C2 domains, nuclear##NM_001128596|TC2N|123036|tandem C2 domains, nuclear##BC040503|TC2N|123036|tandem C2 domains, nuclear##BX647828|TC2N|123036|tandem C2 domains, nuclear##AK126359|TC2N|123036|tandem C2 domains, nuclear##NM_001128595|TC2N|123036|tandem C2 domains, nuclear##NM_152332|TC2N|123036|tandem C2 domains, nuclear##BC126214|CATSPERB|79820|cation channel, sperm-associated, beta##BC126216|CATSPERB|79820|cation channel, sperm-associated, beta##AK126034|CATSPERB|79820|cation channel, sperm-associated, beta##NM_024764|CATSPERB|79820|cation channel, sperm-associated, beta##AF112152|FBLN5|10516|fibulin 5##AF093118|FBLN5|10516|fibulin 5##BX248290|FBLN5|10516|fibulin 5##BC022280|FBLN5|10516|fibulin 5##AK075147|FBLN5|10516|fibulin 5##AY358898|FBLN5|10516|fibulin 5##NM_006329|FBLN5|10516|fibulin 5##BC146845|TRIP11|9321|thyroid hormone receptor interactor 11##AF007217|TRIP11|9321|thyroid hormone receptor interactor 11##BC002656|TRIP11|9321|thyroid hormone receptor interactor 11##BC069008|TRIP11|9321|thyroid hormone receptor interactor 11##Y12490|TRIP11|9321|thyroid hormone receptor interactor 11##AK307489|TRIP11|9321|thyroid hormone receptor interactor 11##NM_004239|TRIP11|9321|thyroid hormone receptor interactor 11	0.021784	
chr17	7124319	7124442	reg1022223.p1	7.305	+	NM_001365	-1012	-	TSC_hg19_v1_chr17_+_7123256 AK056083 AK058109 AK222518 D43682 AB527421	-1106	+	AK097243 NM_000018 NM_001033859 AK293537 TSC_hg19_v1_chr17_+_7123218 AK056956 AK302653 BC012912 BC000399 X86556 BC020218	-1185	+	BT009822 CU677097 AB527783 TSC_hg19_v1_chr17_-_7137602 AF006012 AK297285 AK304229 AK297099	13239	-	BC014844 TSC_hg19_v1_chr17_-_7137690 AK309771	13305	-	TSC_hg19_v1_chr17_-_7137837 NM_004422 AK312829	13413	-	NM_001365|DLG4|1742|discs, large homolog 4 (Drosophila)##AK056083|ACADVL|37|acyl-CoA dehydrogenase, very long chain##AK058109|ACADVL|37|acyl-CoA dehydrogenase, very long chain##AK222518|ACADVL|37|acyl-CoA dehydrogenase, very long chain##D43682|ACADVL|37|acyl-CoA dehydrogenase, very long chain##AK097243|ACADVL|37|acyl-CoA dehydrogenase, very long chain##NM_000018|ACADVL|37|acyl-CoA dehydrogenase, very long chain##NM_001033859|ACADVL|37|acyl-CoA dehydrogenase, very long chain##AK293537|ACADVL|37|acyl-CoA dehydrogenase, very long chain##AK056956|ACADVL|37|acyl-CoA dehydrogenase, very long chain##AK302653|ACADVL|37|acyl-CoA dehydrogenase, very long chain##BC012912|ACADVL|37|acyl-CoA dehydrogenase, very long chain##BC000399|ACADVL|37|acyl-CoA dehydrogenase, very long chain##X86556|ACADVL|37|acyl-CoA dehydrogenase, very long chain##BC020218|ACADVL|37|acyl-CoA dehydrogenase, very long chain##BT009822|DVL2|1856|dishevelled, dsh homolog 2 (Drosophila)##AF006012|DVL2|1856|dishevelled, dsh homolog 2 (Drosophila)##AK297285|DVL2|1856|dishevelled, dsh homolog 2 (Drosophila)##AK304229|DVL2|1856|dishevelled, dsh homolog 2 (Drosophila)##AK297099|DVL2|1856|dishevelled, dsh homolog 2 (Drosophila)##BC014844|DVL2|1856|dishevelled, dsh homolog 2 (Drosophila)##AK309771|DVL2|1856|dishevelled, dsh homolog 2 (Drosophila)##NM_004422|DVL2|1856|dishevelled, dsh homolog 2 (Drosophila)##AK312829|DVL2|1856|dishevelled, dsh homolog 2 (Drosophila)	0.130067	
chr14	102131945	102132075	reg1021350.p1	7.304	+	BX161470 NM_001362 S79854 TSC_hg19_v1_chr14_+_102027831 AK292310 BC017717	-104247	+	BC150617 NM_001134888	-780827	-	AK092707 TSC_hg19_v1_chr14_+_101300861	-831175	+	NM_001161725 NM_001161726 TSC_hg19_v1_chr14_+_102228166 AL834350 BC051442 AK131391 AK302470	96176	+	TSC_hg19_v1_chr14_+_102276171 NM_002719 NM_178586 NM_178587 AK295449 AK315072 Z69030 U37352 BC016183	144173	+	AB451341 CU677587 D26445 AB463199 L42375 TSC_hg19_v1_chr14_+_102276338	144299	+	BX161470|DIO3|1735|deiodinase, iodothyronine, type III##NM_001362|DIO3|1735|deiodinase, iodothyronine, type III##S79854|DIO3|1735|deiodinase, iodothyronine, type III##BC017717|DIO3|1735|deiodinase, iodothyronine, type III##BC150617|RTL1|388015|retrotransposon-like 1##NM_001134888|RTL1|388015|retrotransposon-like 1##AK092707|MEG3|55384|maternally expressed 3 (non-protein coding)##NM_001161725|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_001161726|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AL834350|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC051442|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK131391|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK302470|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_002719|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178586|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178587|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK315072|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##Z69030|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##U37352|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC016183|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AB451341|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##D26445|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##L42375|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	0.959681	CTCF.p2:2:0.960
chr18	25330127	25330277	reg1020294.p1	7.304	+	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-564969	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	-607323	-	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	-884486	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	426835	-	TSC_hg19_v1_chr18_-_25757363 NM_001792	427195	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	3292500	-	AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3	0.88691	CTCF.p2:10:0.887
chr7	147959934	147960047	reg1017646.p1	7.304	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-2146106	+	NM_014141	-2146538	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-3426854	-	TSC_hg19_v1_chr7_+_148036552 CR933671	76575	+	BC021251 NM_145304	327666	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	435950	+	AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##CR933671|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1	0.995965	CTCF.p2:16:0.996
chr8	130599410	130599542	reg1019295.p2	7.304	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1792693	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1850986	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1851151	+	AB042405 NM_031415	199657	-	BC003599 TSC_hg19_v1_chr8_-_130951934	352439	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	352530	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.010174	
chr15	31091833	31091950	reg1017017.p1	7.303	+	BC105788 NM_001039841	-173013	+	TSC_hg19_v1_chr15_+_30918372 BC071990	-173505	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-406179	-	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	104183	+	CR936734 CR936727 TSC_hg19_v1_chr15_+_31196114 AB023235	104226	+	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	191876	-	BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936734|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936727|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AB023235|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10	0.835639	CTCF.p2:15:0.836
chr3	23842344	23842475	reg1019365.p1	7.303	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	-597654	+	TSC_hg19_v1_chr3_+_23244600 AK307075	-597826	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-1428275	-	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	5001	+	AK314854 TSC_hg19_v1_chr3_+_23847474	5065	+	AK295354 NM_001202476	9524	+	AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK310298|ZNF385D|79750|zinc finger protein 385D##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##AK314854|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_001202476|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.0	
chr5	170845813	170845936	reg1018781.p1	7.303	+	AB042278 AB451236 AB451361 AB463949 BT007011 CU676967 CU677717 CU680364 CU692436 DQ892032 DQ895223 EF429251 X16934 TSC_hg19_v1_chr5_+_170815031	-30883	+	NM_001037738 NM_002520 NM_199185 TSC_hg19_v1_chr5_+_170814855 D28343 AK290652 BC008495 BC107754 BC012566 BC021668 DQ303464 BC016716 BC016768 BC016824 BC021983 BC014349 BC002398 M23613 M26697 BC020467 BC050628 M28699 AY740634 AY740635 AY740636 AY740637 AY740638 AY740639 AY740640 BC063542	-31077	+	BC017291 NM_021025 DQ892654 DQ895893 DQ896085	-109546	+	AY358811 AF075292 NM_003862	788	+	BC006245 TSC_hg19_v1_chr5_+_170847089 AB007422 AB528345 AF211188 AM393798 BT019570 BT019571 DQ892736 DQ895983	1257	+	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	587654	-	AB042278|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451236|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451361|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BT007011|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ892032|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ895223|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##EF429251|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##X16934|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##NM_001037738|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##NM_002520|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##NM_199185|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##D28343|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AK290652|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC008495|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC107754|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC012566|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC021668|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ303464|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016716|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016768|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016824|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC021983|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC014349|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC002398|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M23613|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M26697|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC020467|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC050628|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M28699|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740634|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740635|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740636|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740637|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740638|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740639|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740640|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC017291|TLX3|30012|T-cell leukemia homeobox 3##NM_021025|TLX3|30012|T-cell leukemia homeobox 3##DQ892654|TLX3|30012|T-cell leukemia homeobox 3##DQ895893|TLX3|30012|T-cell leukemia homeobox 3##DQ896085|TLX3|30012|T-cell leukemia homeobox 3##AY358811|FGF18|8817|fibroblast growth factor 18##AF075292|FGF18|8817|fibroblast growth factor 18##NM_003862|FGF18|8817|fibroblast growth factor 18##BC006245|FGF18|8817|fibroblast growth factor 18##AB007422|FGF18|8817|fibroblast growth factor 18##AF211188|FGF18|8817|fibroblast growth factor 18##AM393798|FGF18|8817|fibroblast growth factor 18##BT019570|FGF18|8817|fibroblast growth factor 18##BT019571|FGF18|8817|fibroblast growth factor 18##DQ892736|FGF18|8817|fibroblast growth factor 18##DQ895983|FGF18|8817|fibroblast growth factor 18##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11	0.115728	
chrX	11559091	11559266	reg1019914.p2	7.303	+	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	-247636	+	AF177663 NM_013423 AK297713	-275070	-	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	-429709	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	124642	-	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	217165	+	NM_001193270 AK300814	217539	+	AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase##AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	0.0	
chr1	38385071	38385189	reg1020212.p1	7.302	+	TSC_hg19_v1_chr1_-_38325265 X78710 AK225923 AK298751 AK309584 AK314233 BC014454 NM_005955	-59872	-	AY517499 TSC_hg19_v1_chr1_+_38273967 BC107856 BC057819 AK127381 BC102041 BC127187 BC127188 BC141938	-111220	+	TSC_hg19_v1_chr1_-_38273855 AY172561 NM_024640 BC080186	-111259	-	TSC_hg19_v1_chr1_-_38397424 AK022846	12305	-	TSC_hg19_v1_chr1_-_38412689 AL833055 BC058932	27552	-	TSC_hg19_v1_chr1_-_38412717 BC062317 AK310824	27581	-	X78710|MTF1|4520|metal-regulatory transcription factor 1##AK225923|MTF1|4520|metal-regulatory transcription factor 1##AK298751|MTF1|4520|metal-regulatory transcription factor 1##AK309584|MTF1|4520|metal-regulatory transcription factor 1##AK314233|MTF1|4520|metal-regulatory transcription factor 1##BC014454|MTF1|4520|metal-regulatory transcription factor 1##NM_005955|MTF1|4520|metal-regulatory transcription factor 1##AY517499|C1orf122|127687|chromosome 1 open reading frame 122##BC107856|C1orf122|127687|chromosome 1 open reading frame 122##BC057819|C1orf122|127687|chromosome 1 open reading frame 122##AK127381|C1orf122|127687|chromosome 1 open reading frame 122##BC102041|C1orf122|127687|chromosome 1 open reading frame 122##BC127187|C1orf122|127687|chromosome 1 open reading frame 122##BC127188|C1orf122|127687|chromosome 1 open reading frame 122##AY172561|YRDC|79693|yrdC domain containing (E. coli)##NM_024640|YRDC|79693|yrdC domain containing (E. coli)##BC080186|YRDC|79693|yrdC domain containing (E. coli)##AK022846|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##AL833055|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##BC058932|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##BC062317|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##AK310824|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa	0.0	
chr15	41206799	41206910	reg1017579.p1	7.302	+	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	-20154	+	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	-40407	-	TSC_hg19_v1_chr15_+_41136676 NM_001032367 AK303899 BC004140 BT007425 CU676280 DQ890747 DQ892293 DQ895493	-70153	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	14844	+	NM_001142776 NM_024111 TSC_hg19_v1_chr15_+_41245671 BC019625 BC001683 BC001847 AY702027	38850	+	TSC_hg19_v1_chr15_-_41364176 AK057582	157350	-	AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)##NM_001142776|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##NM_024111|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC019625|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001683|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001847|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AY702027|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AK057582|INO80|54617|INO80 homolog (S. cerevisiae)	0.513163	CTCF.p2:-17:0.383
chr20	412217	412346	reg1018664.p2	7.302	+	TSC_hg19_v1_chr20_+_389363 AB107766 CU674484	-22896	+	TSC_hg19_v1_chr20_+_388978 AK303357 BC015219 BC000983	-23223	+	TSC_hg19_v1_chr20_+_388942 AK297524 AK309414	-23331	+	AB449906 TSC_hg19_v1_chr20_-_443136	30811	-	TSC_hg19_v1_chr20_-_443161 BC014983 AK291648	30869	-	TSC_hg19_v1_chr20_-_443178 AK095110 NM_144628 AK127062	30934	-	AB107766|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##BC015219|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##BC000983|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##AK297524|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##AK309414|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##AB449906|TBC1D20|128637|TBC1 domain family, member 20##BC014983|TBC1D20|128637|TBC1 domain family, member 20##AK291648|TBC1D20|128637|TBC1 domain family, member 20##AK095110|TBC1D20|128637|TBC1 domain family, member 20##NM_144628|TBC1D20|128637|TBC1 domain family, member 20##AK127062|TBC1D20|128637|TBC1 domain family, member 20	0.853185	CTCF.p2:19:0.833
chr21	39131413	39131529	reg1020712.p1	7.302	+	NM_130438 NM_001396 U52373 D85759 U58496	-338851	+	D86550 NM_130436	-340265	+	AF108830 NM_101395 AB015283 AB015284	-391601	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	157240	-	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	361930	-	BC013327 NM_002243	497192	+	NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.665741	CTCF.p2:-8:0.666
chr2	170789786	170789896	reg1016643.p1	7.302	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-105883	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-108456	-	TSC_hg19_v1_chr2_+_170662051 M20328 M35261	-127697	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	244844	+	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	782017	+	TSC_hg19_v1_chr2_+_171571942 AB464708	782136	+	NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##M20328|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##M35261|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor	0.0	
chr8	22225426	22225545	reg1019089.p1	7.302	+	TSC_hg19_v1_chr8_+_22225175 AK295807	-310	+	TSC_hg19_v1_chr8_+_22225050 NM_001135153	-453	+	TSC_hg19_v1_chr8_+_22224790 AK172810 BC015770 D31887	-640	+	AK055013 TSC_hg19_v1_chr8_+_22298511 NM_001243974 NM_001243975 NM_005605	72961	+	TSC_hg19_v1_chr8_+_22298590 BC004864 S46622 AK299415	73152	+	TSC_hg19_v1_chr8_+_22298813 AY007249 AB385002 CU678778	73359	+	AK295807|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##NM_001135153|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##AK172810|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##BC015770|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##D31887|SLC39A14|23516|solute carrier family 39 (zinc transporter), member 14##AK055013|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##NM_001243974|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##NM_001243975|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##NM_005605|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##BC004864|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##S46622|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##AK299415|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##AY007249|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme	0.429683	CTCF.p2:2:0.430
chr9	102790646	102790827	reg1001050.p2	7.302	+	TSC_hg19_v1_chr9_+_102677458 BC101564 BC101566 BC143430 BC039048	-113276	+	TSC_hg19_v1_chr9_+_102668954 BC111009 AK000658 BC070269 AK095262 AL833620	-121735	+	AK311412 TSC_hg19_v1_chr9_+_102668952	-121784	+	AB383909 AJ344330 TSC_hg19_v1_chr9_-_102861281 AB011145 AY359048 BX648519	70466	-	TSC_hg19_v1_chr9_-_102861295 BC005374	70557	-	TSC_hg19_v1_chr9_-_102861305 AK075024 NM_015051	70585	-	BC101564|STX17|55014|syntaxin 17##BC101566|STX17|55014|syntaxin 17##BC143430|STX17|55014|syntaxin 17##BC111009|STX17|55014|syntaxin 17##AK000658|STX17|55014|syntaxin 17##BC070269|STX17|55014|syntaxin 17##AK095262|STX17|55014|syntaxin 17##AL833620|STX17|55014|syntaxin 17##AK311412|STX17|55014|syntaxin 17##AJ344330|ERP44|23071|endoplasmic reticulum protein 44##AB011145|ERP44|23071|endoplasmic reticulum protein 44##AY359048|ERP44|23071|endoplasmic reticulum protein 44##BX648519|ERP44|23071|endoplasmic reticulum protein 44##BC005374|ERP44|23071|endoplasmic reticulum protein 44##AK075024|ERP44|23071|endoplasmic reticulum protein 44##NM_015051|ERP44|23071|endoplasmic reticulum protein 44	0.0	
chr1	158057218	158057349	reg1018483.p1	7.301	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	-93895	+	AY302131 NM_018240	-94221	+	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	-245721	-	BC027926 NM_001766	92453	+	AK225996 TSC_hg19_v1_chr1_+_158150684 AK310541 J04142 AK310749 AB590619 CU693322	93501	+	M28825 NM_001763	166643	+	BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##AY302131|KIRREL|55243|kin of IRRE like (Drosophila)##NM_018240|KIRREL|55243|kin of IRRE like (Drosophila)##DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule##AK225996|CD1D|912|CD1d molecule##J04142|CD1D|912|CD1d molecule##AK310749|CD1D|912|CD1d molecule##M28825|CD1A|909|CD1a molecule##NM_001763|CD1A|909|CD1a molecule	0.429611	CTCF.p2:4:0.430
chr16	711052	711147	reg1010452.p2	7.301	+	TSC_hg19_v1_chr16_+_699362 AB067511 BC121185 BC121186 AK091062 AX746759 NM_145294	-11720	+	TSC_hg19_v1_chr16_+_691949 BC007346 BC111391	-19164	+	TSC_hg19_v1_chr16_+_691832 BC001912 NM_138418	-19262	+	TSC_hg19_v1_chr16_+_718131 NM_138769 AY207375 AK308984 BC014942 AL834163	7008	+	TSC_hg19_v1_chr16_+_718165 AK024450 AJ517413	7079	+	TSC_hg19_v1_chr16_+_725686 AJ272344 AK294136	14601	+	AB067511|WDR90|197335|WD repeat domain 90##BC121185|WDR90|197335|WD repeat domain 90##BC121186|WDR90|197335|WD repeat domain 90##AK091062|WDR90|197335|WD repeat domain 90##NM_145294|WDR90|197335|WD repeat domain 90##BC007346|FAM195A|84331|family with sequence similarity 195, member A##BC111391|FAM195A|84331|family with sequence similarity 195, member A##BC001912|FAM195A|84331|family with sequence similarity 195, member A##NM_138418|FAM195A|84331|family with sequence similarity 195, member A##NM_138769|RHOT2|89941|ras homolog gene family, member T2##AY207375|RHOT2|89941|ras homolog gene family, member T2##AK308984|RHOT2|89941|ras homolog gene family, member T2##BC014942|RHOT2|89941|ras homolog gene family, member T2##AL834163|RHOT2|89941|ras homolog gene family, member T2##AK024450|RHOT2|89941|ras homolog gene family, member T2##AJ517413|RHOT2|89941|ras homolog gene family, member T2##AJ272344|RHBDL1|9028|rhomboid, veinlet-like 1 (Drosophila)##AK294136|RHBDL1|9028|rhomboid, veinlet-like 1 (Drosophila)	0.424033	CTCF.p2:-20:0.375
chr20	46818072	46818197	reg1018702.p2	7.301	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-402816	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-403382	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-687450	+	AB037836 TSC_hg19_v1_chr20_-_47444291	626152	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	626305	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	720184	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.295338	CTCF.p2:-11:0.295
chr4	122033801	122033883	reg1016140.p1	7.301	+	BC019351 AK289615 NM_024574 TSC_hg19_v1_chr4_-_121993690	-40212	-	TSC_hg19_v1_chr4_-_121843992 AB464059 BC121037 BC121038 AK314293 AK310958 AF272897 AK056352 NM_018699 BC066942	-189847	-	EU831987 EU832080 AB528692 AF394735 TSC_hg19_v1_chr4_-_120987954 U65410 BC070283 AJ000186 BC005945 BC000356 U31278 AK223433 AK313827 AK298228 NM_002358	-1045888	-	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	51642	-	AK301058 NM_001128843	103939	-	AK303192 NM_001244764	114778	-	BC019351|NDNF|79625|neuron-derived neurotrophic factor##AK289615|NDNF|79625|neuron-derived neurotrophic factor##NM_024574|NDNF|79625|neuron-derived neurotrophic factor##BC121037|PRDM5|11107|PR domain containing 5##BC121038|PRDM5|11107|PR domain containing 5##AK314293|PRDM5|11107|PR domain containing 5##AK310958|PRDM5|11107|PR domain containing 5##AF272897|PRDM5|11107|PR domain containing 5##AK056352|PRDM5|11107|PR domain containing 5##NM_018699|PRDM5|11107|PR domain containing 5##BC066942|PRDM5|11107|PR domain containing 5##EU831987|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##EU832080|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF394735|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC070283|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AJ000186|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC005945|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC000356|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK223433|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK313827|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK298228|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##NM_002358|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3##AK301058|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3##AK303192|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3	0.27594	CTCF.p2:10:0.276
chr1	171614181	171614283	reg1016418.p1	7.300	+	AF253978 AL096857 TSC_hg19_v1_chr1_+_171481269 AF488829	-132980	+	TSC_hg19_v1_chr1_+_171454689 BC066968 NM_015172 BC058930 BC026108 BC045713 BC001260 BC006090	-159538	+	BC002780 NM_002022 Z11737	-330804	+	AB528547 DQ892415 DQ895629 AF001620 FJ227302 FJ237046 FJ237047 NM_000261 U85257 D88214 BC029261 AK300924 AK300943 AK301297 AK315443 AK097310	7568	-	BC005974 TSC_hg19_v1_chr1_-_171711206 AL035296 AK290441 AF044310 BC031264 BC007019 NM_001185127 NM_003762	97003	-	AK092254 TSC_hg19_v1_chr1_+_171711293	97055	+	AF253978|PRRC2C|23215|proline-rich coiled-coil 2C##AL096857|PRRC2C|23215|proline-rich coiled-coil 2C##AF488829|PRRC2C|23215|proline-rich coiled-coil 2C##BC066968|PRRC2C|23215|proline-rich coiled-coil 2C##NM_015172|PRRC2C|23215|proline-rich coiled-coil 2C##BC058930|PRRC2C|23215|proline-rich coiled-coil 2C##BC026108|PRRC2C|23215|proline-rich coiled-coil 2C##BC045713|PRRC2C|23215|proline-rich coiled-coil 2C##BC001260|PRRC2C|23215|proline-rich coiled-coil 2C##BC006090|PRRC2C|23215|proline-rich coiled-coil 2C##BC002780|FMO4|2329|flavin containing monooxygenase 4##NM_002022|FMO4|2329|flavin containing monooxygenase 4##Z11737|FMO4|2329|flavin containing monooxygenase 4##DQ892415|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##DQ895629|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AF001620|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ227302|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ237046|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ237047|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##NM_000261|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##U85257|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##D88214|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##BC029261|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK300924|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK300943|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK301297|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK315443|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK097310|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##BC005974|VAMP4|8674|vesicle-associated membrane protein 4##AL035296|VAMP4|8674|vesicle-associated membrane protein 4##AK290441|VAMP4|8674|vesicle-associated membrane protein 4##AF044310|VAMP4|8674|vesicle-associated membrane protein 4##BC031264|VAMP4|8674|vesicle-associated membrane protein 4##BC007019|VAMP4|8674|vesicle-associated membrane protein 4##NM_001185127|VAMP4|8674|vesicle-associated membrane protein 4##NM_003762|VAMP4|8674|vesicle-associated membrane protein 4	0.716235	CTCF.p2:8:0.716
chr15	85794273	85794376	reg1019554.p1	7.300	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-128006	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-268998	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-269087	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	129567	+	AF127481 NM_144767	425943	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	543773	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	0.919612	CTCF.p2:-13:0.920
chr6	32659944	32660059	reg1019483.p1	7.300	+	L34097 L34098 L34101 L34102 L34103 L34105 L34106 L34107 L40180 L42626 M17207 M22550 M59800 M59801 U66400 M17565 X00369 M35982 M57649 AF000447 U83585 AF291674 AY656681 M16996 X96420 M17563 M17564 AF522251 AB209580 TSC_hg19_v1_chr6_-_32634435 AK295476 AK295695 M60028 M20432 AK296613 AK316333 M25327 X03068 NM_001243961 NM_002123 M16276	-25561	-	AK130811 AK313975 NM_002122 TSC_hg19_v1_chr6_+_32605182 BC073977 BC051832 AB209628 X00452 L46875 L46876 L46877 L46878 L46879 L46880 L46881 U77589 M34996 M20431 L34082 L34083 L34084 L34085 L34090 L34094 M59802	-54758	+	AF010142 M16954 M16955 M16956 M16957 M16958 M16959 M17377 M17378 U31770 U17380 U17379 D86415 X99896 M28584 M30180 AF490771 AJ297582 AJ297583 AJ297584 AJ297585 AJ297587 AJ302075 AY626551 AY770514 AY935719 AY961062 AY961063 AY961064 AY961065 AY961066 AY961067 AY961069 AY961070 AY961071 AY961072 AY961073 AY961074 AY961076 AY961077 AY961078 DQ002917 DQ090958 EU375850 GQ891551 HM067843 HM067844 HM067847 HM067848 HM067849 HM067850 HM067852 HM067853 HM067854 HM067855 HM067856 HM067857 HM067858 HM067859 HM067860 HM067861 HM067862 HM067863 HM627215 M11161 M30179 AB528619 CU678949 CU689080 L02545 X99895 U84892 AJ697892 AJ697893 U95989 BC171883 M11867 M20504 M28583 L76133 U65585 BC033827 M20430 AB062112 M26038 BC007920 TSC_hg19_v1_chr6_-_32557583 M33600 BC108922 X12544 AK291499 X03069 AK225683 AK225690 AK289463 AK290388 BC008403 BC031023 AK291987 NM_001243965 NM_002124 AK293020	-102473	-	NM_020056 TSC_hg19_v1_chr6_+_32709167 L34094	49224	+	BC031995 AK098007 NM_001198858	71296	-	CR541811 CR541832 M26040 BC020226 AY645723 X03066 BC006097 AK301415 AK316197 NM_002120	124774	-	L34097|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34098|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34101|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34102|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34103|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34105|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34106|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34107|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L40180|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L42626|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M17207|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M22550|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M59800|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M59801|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##U66400|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M17565|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##X00369|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M35982|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M57649|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AF000447|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##U83585|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AF291674|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AY656681|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M16996|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##X96420|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M17563|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M17564|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AB209580|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK295476|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK295695|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M60028|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M20432|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK296613|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK316333|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M25327|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##X03068|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##NM_001243961|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##NM_002123|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M16276|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK130811|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##AK313975|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##NM_002122|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##BC073977|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##BC051832|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##AB209628|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##X00452|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L46875|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##U77589|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##M34996|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##M20431|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34082|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34083|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34084|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34085|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34090|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34094|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##M59802|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##AF010142|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M16954|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M16955|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M16956|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M16957|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M16958|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M16959|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M17377|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M17378|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##U31770|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##U17379|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##D86415|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M28584|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M30180|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AF490771|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AJ297582|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AJ297583|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AJ297585|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AJ297587|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY626551|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY770514|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY935719|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961062|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961063|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961064|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AY961065|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961066|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961067|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AY961070|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AY961072|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961073|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961076|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961077|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961078|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##DQ002917|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##DQ090958|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M11161|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M30179|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##L02545|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##X99895|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AJ697892|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AJ697893|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M11867|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M20504|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M28583|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##L76133|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##U65585|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC033827|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M20430|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AB062112|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M26038|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC007920|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M33600|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC108922|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AK291499|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##X03069|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AK225683|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AK225690|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AK289463|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC008403|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC031023|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AK291987|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##NM_001243965|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##NM_002124|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AK293020|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##NM_020056|HLA-DQA2|3118|major histocompatibility complex, class II, DQ alpha 2##L34094|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##BC031995|HLA-DQB2|3120|major histocompatibility complex, class II, DQ beta 2##AK098007|HLA-DQB2|3120|major histocompatibility complex, class II, DQ beta 2##NM_001198858|HLA-DQB2|3120|major histocompatibility complex, class II, DQ beta 2##CR541811|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##CR541832|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##M26040|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##BC020226|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##AY645723|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##X03066|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##BC006097|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##AK301415|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##AK316197|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##NM_002120|HLA-DOB|3112|major histocompatibility complex, class II, DO beta	0.442633	CTCF.p2:0:0.443
chr20	8701883	8702006	reg1018521.p2	7.299	+	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	-588914	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-701472	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-701537	-	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	347739	+	AK307482 TSC_hg19_v1_chr20_+_9049806	347854	+	NM_182797 BC117458 BC143868	496114	+	AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4	0.388212	CTCF.p2:6:0.388
chr2	7154611	7154724	reg1018901.p2	7.299	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-97080	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-136804	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-147964	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1667536	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1823052	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1989154	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.233185	CTCF.p2:8:0.233
chr2	73517483	73517600	reg1019745.p1	7.299	+	AB075820 TSC_hg19_v1_chr2_-_73496671 NM_001080410	-20865	-	BC169255 TSC_hg19_v1_chr2_-_73492731	-24820	-	TSC_hg19_v1_chr2_+_73461457 AK222478	-56077	+	AB463596 BC136252 BC143379 X60104 BC034462 TSC_hg19_v1_chr2_-_73520677 NM_001965 AK314154	3099	-	TSC_hg19_v1_chr2_+_73613119 AJ417593 AX751581 NM_015120	95517	+	AB019551 BC012626 AF187813 NM_003960	351973	-	AB075820|FBXO41|150726|F-box protein 41##NM_001080410|FBXO41|150726|F-box protein 41##BC169255|FBXO41|150726|F-box protein 41##AK222478|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##BC136252|EGR4|1961|early growth response 4##BC143379|EGR4|1961|early growth response 4##X60104|EGR4|1961|early growth response 4##BC034462|EGR4|1961|early growth response 4##NM_001965|EGR4|1961|early growth response 4##AK314154|EGR4|1961|early growth response 4##AJ417593|ALMS1|7840|Alstrom syndrome 1##AX751581|ALMS1|7840|Alstrom syndrome 1##NM_015120|ALMS1|7840|Alstrom syndrome 1##AB019551|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##BC012626|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##AF187813|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##NM_003960|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)	0.029056	
chr18	31419543	31419669	reg1018638.p1	7.298	+	AB051500 TSC_hg19_v1_chr18_+_31319257	-100400	+	NM_030632 AK131454	-261047	+	BX648108 TSC_hg19_v1_chr18_-_31158297	-261377	-	AK296539 NM_001198549	208960	-	NM_001198547	382827	-	AK297185 BC000313 TSC_hg19_v1_chr18_-_31803319	383637	-	AB051500|ASXL3|80816|additional sex combs like 3 (Drosophila)##NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)##AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)##AK296539|NOL4|8715|nucleolar protein 4##NM_001198549|NOL4|8715|nucleolar protein 4##NM_001198547|NOL4|8715|nucleolar protein 4##AK297185|NOL4|8715|nucleolar protein 4##BC000313|NOL4|8715|nucleolar protein 4	0.994243	CTCF.p2:4:0.994
chr9	92191354	92191501	reg1021758.p1	7.298	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-78420	-	BC054500 NM_001142287 NM_006378	-96817	-	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-258009	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	28554	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	1213692	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1372609	+	BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase	0.998039	CTCF.p2:-5:0.998
chrX	15583485	15583616	reg1021692.p1	7.298	+	NM_001721	-58120	+	NM_203281 AK291824 AK313568 X83107	-64581	+	NM_001018109 NM_003662	-71840	-	AK315144 NM_021804 AB193259	36684	-	BC014317 NM_020665	99603	-	AB021660 AK291050 NM_007220	172851	+	NM_001721|BMX|660|BMX non-receptor tyrosine kinase##NM_203281|BMX|660|BMX non-receptor tyrosine kinase##AK291824|BMX|660|BMX non-receptor tyrosine kinase##AK313568|BMX|660|BMX non-receptor tyrosine kinase##X83107|BMX|660|BMX non-receptor tyrosine kinase##NM_001018109|PIR|8544|pirin (iron-binding nuclear protein)##NM_003662|PIR|8544|pirin (iron-binding nuclear protein)##AK315144|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##NM_021804|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##AB193259|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##BC014317|TMEM27|57393|transmembrane protein 27##NM_020665|TMEM27|57393|transmembrane protein 27##AB021660|CA5B|11238|carbonic anhydrase VB, mitochondrial##AK291050|CA5B|11238|carbonic anhydrase VB, mitochondrial##NM_007220|CA5B|11238|carbonic anhydrase VB, mitochondrial	0.021514	
chr12	77184885	77184989	reg1014936.p2	7.297	+	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	-26911	+	TSC_hg19_v1_chr12_+_77157894 BC050324 AB023163	-27033	+	TSC_hg19_v1_chr12_+_77157882 NM_015336 BC030990	-27075	+	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	87846	-	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	274352	-	NM_014903 AJ488201	1040195	+	AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC050324|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB023163|ZDHHC17|23390|zinc finger, DHHC-type containing 17##NM_015336|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC030990|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3	0.999906	CTCF.p2:15:1.000
chr7	65285687	65285810	reg1021238.p1	7.297	+	TSC_hg19_v1_chr7_-_65235746 BC066990	-50003	-	TSC_hg19_v1_chr7_+_65216060 BC052238 BC073761 BC122874 BC119782	-69665	+	TSC_hg19_v1_chr7_-_65215912 BX647963	-69830	-	TSC_hg19_v1_chr7_+_65338277 BC027734 NM_173517 BX647631 AY423045	52501	+	AK289522 TSC_hg19_v1_chr7_+_65338347	52597	+	TSC_hg19_v1_chr7_+_65338352 AK304077	52628	+	BC066990|LOC441242|441242|uncharacterized LOC441242##BC052238|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC073761|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC122874|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC119782|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC027734|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##NM_173517|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##BX647631|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##AY423045|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##AK289522|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##AK304077|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1	0.0	
chrX	41135534	41135644	reg1018381.p1	7.297	+	TSC_hg19_v1_chrX_+_40944880 NM_001039590 NM_001039591	-190717	+	TSC_hg19_v1_chrX_-_40595139 AK308871	-540460	-	TSC_hg19_v1_chrX_-_40594999 AK293070	-540609	-	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	57061	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	57868	+	AK304661 TSC_hg19_v1_chrX_+_41193866 AK127902	58276	+	NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked##NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked##AK308871|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	0.725765	CTCF.p2:-11:0.726
chr12	91338952	91339082	reg1021851.p1	7.296	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-1235472	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-1236330	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-1289166	-	BC026075 BC024183 BC027600 BC034491 NM_152638	9934	-	U59111 TSC_hg19_v1_chr12_-_91398750	59730	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	59762	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.997507	CTCF.p2:5:0.998
chr18	11553463	11553609	reg1018829.p2	7.296	+	NM_022068	-404776	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-1027439	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-1027480	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	135676	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	197979	+	L10665 TSC_hg19_v1_chr18_+_11752245	198679	+	NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.593977	CTCF.p2:-13:0.594
chr3	51348590	51348733	reg1021560.p1	7.296	+	AY254099 NM_004947 AY145303	-635979	+	TSC_hg19_v1_chr3_+_50654932 AK313565 U43784 AB528893 EU832627 EU832702 CU675717 AB451303 AB451434	-693729	+	BC001662 BC010407 TSC_hg19_v1_chr3_+_50654611 BC007591 U09578	-694034	+	NM_006010 TSC_hg19_v1_chr3_+_51422691	74030	+	TSC_hg19_v1_chr3_+_51422721 BC113588 BC113590 AK292243 BC007282 BT007110 EU832655 EU832733 BC033055	74120	+	NM_013286 TSC_hg19_v1_chr3_+_51428706	80041	+	AY254099|DOCK3|1795|dedicator of cytokinesis 3##NM_004947|DOCK3|1795|dedicator of cytokinesis 3##AY145303|DOCK3|1795|dedicator of cytokinesis 3##AK313565|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U43784|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832627|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832702|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451303|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451434|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC001662|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC010407|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC007591|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U09578|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##NM_006010|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113588|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113590|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AK292243|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC007282|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BT007110|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832655|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832733|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC033055|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##NM_013286|RBM15B|29890|RNA binding motif protein 15B	0.077885	
chr4	81244040	81244157	reg1021952.p1	7.296	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	-56239	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	-125444	+	AF275815 NM_020226	-137675	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	12799	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	708044	+	AB528214 D70899 NM_006259 X94612	882109	-	NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##AF275815|PRDM8|56978|PR domain containing 8##NM_020226|PRDM8|56978|PR domain containing 8##BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II	0.440325	CTCF.p2:8:0.440
chr5	121285633	121285775	reg1022160.p1	7.296	+	BC034419 NM_177478 HQ258558	-98051	+	TSC_hg19_v1_chr5_+_119800010 AF242769 NM_016644	-1485693	+	TSC_hg19_v1_chr5_+_119799994 BC092474	-1485756	+	AK058015 NM_152546 TSC_hg19_v1_chr5_+_121297676 BC031222 CU689120 AY611630	11987	+	AK316309 AK307732 NM_001178102	127157	-	S78694 AF039291 AK297709 TSC_hg19_v1_chr5_-_121413955 AK298781 AK311354	128229	-	BC034419|FTMT|94033|ferritin mitochondrial##NM_177478|FTMT|94033|ferritin mitochondrial##HQ258558|FTMT|94033|ferritin mitochondrial##AF242769|PRR16|51334|proline rich 16##NM_016644|PRR16|51334|proline rich 16##BC092474|PRR16|51334|proline rich 16##AK058015|SRFBP1|153443|serum response factor binding protein 1##NM_152546|SRFBP1|153443|serum response factor binding protein 1##BC031222|SRFBP1|153443|serum response factor binding protein 1##AY611630|SRFBP1|153443|serum response factor binding protein 1##AK316309|LOX|4015|lysyl oxidase##AK307732|LOX|4015|lysyl oxidase##NM_001178102|LOX|4015|lysyl oxidase##S78694|LOX|4015|lysyl oxidase##AF039291|LOX|4015|lysyl oxidase##AK297709|LOX|4015|lysyl oxidase##AK298781|LOX|4015|lysyl oxidase	0.042255	
chr6	97516231	97516338	reg1017380.p1	7.296	+	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	-143661	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-170520	-	TSC_hg19_v1_chr6_-_97345751 BC018802 AF161474	-170532	-	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	214806	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	1766296	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	1766388	+	NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC018802|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF161474|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2	0.992852	CTCF.p2:2:0.993
chr20	47823803	47823912	reg1018786.p1	7.295	+	AF061938 AF061939 AF061940 AF061941 AY546099 NM_001037328 NM_004602 NM_017452 NM_017453 NM_017454 TSC_hg19_v1_chr20_-_47804905	-18944	-	TSC_hg19_v1_chr20_-_47804876 AK292859 BC001893 BC010169 AY529074 AK291487 BC007532 AK057739 AK025519 BC095397 AL136601	-19071	-	TSC_hg19_v1_chr20_+_47662875 AF053640	-160969	+	NM_017895 BC126287 BC130275 BC144125 BC104480 HQ258508 AY044431 AL832131 EU718675 TSC_hg19_v1_chr20_+_47835952 AK300135	12035	+	TSC_hg19_v1_chr20_+_47835954 AK022979	12101	+	TSC_hg19_v1_chr20_+_47835964 BC009304 BC011927 BC016060 HQ258546	12117	+	AF061938|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061939|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061940|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061941|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AY546099|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_001037328|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_004602|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017452|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017453|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017454|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK292859|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC001893|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC010169|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AY529074|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK291487|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC007532|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK057739|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK025519|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC095397|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AL136601|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF053640|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##NM_017895|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC126287|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC130275|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC144125|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC104480|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##HQ258508|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AY044431|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AL832131|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##EU718675|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AK300135|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AK022979|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC009304|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC011927|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC016060|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##HQ258546|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	0.947633	CTCF.p2:11:0.948
chr2	169818296	169818401	reg1018145.p2	7.295	+	BC104778 BC113376 NM_001081686 NM_021176 CR627438 HQ258182	-60553	+	TSC_hg19_v1_chr2_-_169746945 AF225416 BC022255 NM_020675 AK291093	-71407	-	NM_001039724 NM_001171632 BC014189 NM_052946 AK002203 AK290254 BC093072 AJ532842 DQ402497	-159221	+	AF091582 NM_003742	69484	-	AF529286 NM_005771	102950	+	TSC_hg19_v1_chr2_+_169923533 AY017349 NM_199204 AK296625 BC051797 AK313220	105277	+	BC104778|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##BC113376|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##NM_001081686|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##NM_021176|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##CR627438|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##HQ258182|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_001039724|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171632|NOSTRIN|115677|nitric oxide synthase trafficker##BC014189|NOSTRIN|115677|nitric oxide synthase trafficker##NM_052946|NOSTRIN|115677|nitric oxide synthase trafficker##AK002203|NOSTRIN|115677|nitric oxide synthase trafficker##AK290254|NOSTRIN|115677|nitric oxide synthase trafficker##BC093072|NOSTRIN|115677|nitric oxide synthase trafficker##AJ532842|NOSTRIN|115677|nitric oxide synthase trafficker##DQ402497|NOSTRIN|115677|nitric oxide synthase trafficker##AF091582|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11##NM_003742|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11##AF529286|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##NM_005771|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AY017349|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##NM_199204|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AK296625|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##BC051797|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AK313220|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9	0.98556	CTCF.p2:-14:0.986
chr11	116324899	116325005	reg1019943.p1	7.294	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-949772	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-1236304	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1775704	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	318746	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	333763	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	333786	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.999489	CTCF.p2:-1:0.999
chr10	98451044	98451169	reg1019648.p1	7.293	+	TSC_hg19_v1_chr10_-_98346798 AF269150 BC136788 BC136789 BC144412 NM_020123	-104283	-	TSC_hg19_v1_chr10_-_98346770 AK314348	-104328	-	TSC_hg19_v1_chr10_-_98346739 AF160213	-104434	-	BX648550 TSC_hg19_v1_chr10_-_98480272 AK125635 NM_152309	29135	-	TSC_hg19_v1_chr10_+_98592020 NM_001170765 NM_001170766 AL832106 AK308356 BC053359	140947	+	TSC_hg19_v1_chr10_-_98592186 AB593180	141094	-	AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3##BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3##AK314348|TM9SF3|56889|transmembrane 9 superfamily member 3##AF160213|TM9SF3|56889|transmembrane 9 superfamily member 3##BX648550|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AK125635|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_152309|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor##AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor##BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor	0.0	
chr12	58176402	58176550	reg1020933.p1	7.293	+	TSC_hg19_v1_chr12_+_58166438 AK024983 AK292276 AL050100 AB528834 AM393242 AM393762 CU677623	-10005	+	TSC_hg19_v1_chr12_+_58166407 BC099841 BC103501	-10070	+	TSC_hg19_v1_chr12_+_58166396 AF455816 BC016395 NM_015433 NM_206914	-10106	+	NM_001172695 NM_001172696 NM_001172697 NM_005726 TSC_hg19_v1_chr12_+_58176558 AK304621 AK313453 BC022862 AK295323 AK308981 BC093068 AF110399	83	+	BC111730 AF041449 NM_006576	33369	-	AB385539 AY279531 CU688100 TSC_hg19_v1_chr12_-_58240364	63817	-	AK024983|METTL21B|25895|methyltransferase like 21B##AK292276|METTL21B|25895|methyltransferase like 21B##AL050100|METTL21B|25895|methyltransferase like 21B##AM393242|METTL21B|25895|methyltransferase like 21B##AM393762|METTL21B|25895|methyltransferase like 21B##BC099841|METTL21B|25895|methyltransferase like 21B##BC103501|METTL21B|25895|methyltransferase like 21B##AF455816|METTL21B|25895|methyltransferase like 21B##BC016395|METTL21B|25895|methyltransferase like 21B##NM_015433|METTL21B|25895|methyltransferase like 21B##NM_206914|METTL21B|25895|methyltransferase like 21B##NM_001172695|TSFM|10102|Ts translation elongation factor, mitochondrial##NM_001172696|TSFM|10102|Ts translation elongation factor, mitochondrial##NM_001172697|TSFM|10102|Ts translation elongation factor, mitochondrial##NM_005726|TSFM|10102|Ts translation elongation factor, mitochondrial##AK304621|TSFM|10102|Ts translation elongation factor, mitochondrial##AK313453|TSFM|10102|Ts translation elongation factor, mitochondrial##BC022862|TSFM|10102|Ts translation elongation factor, mitochondrial##AK295323|TSFM|10102|Ts translation elongation factor, mitochondrial##AK308981|TSFM|10102|Ts translation elongation factor, mitochondrial##BC093068|TSFM|10102|Ts translation elongation factor, mitochondrial##AF110399|TSFM|10102|Ts translation elongation factor, mitochondrial##BC111730|AVIL|10677|advillin##AF041449|AVIL|10677|advillin##NM_006576|AVIL|10677|advillin##AY279531|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	0.999878	CTCF.p2:-6:1.000
chr6	39060106	39060195	reg1017844.p1	7.293	+	BC112126 BC113493 NM_002062 TSC_hg19_v1_chr6_+_39016556 U01104 L23503 AB463688 U01156 U01157	-43564	+	AF527621 NM_001206927	-377034	+	TSC_hg19_v1_chr6_-_38670922 NM_006708	-389213	-	AF086405 TSC_hg19_v1_chr6_-_39072506	12309	-	TSC_hg19_v1_chr6_-_39082938 CR627244 AK001963 NM_018322 EU832483 EU832563 BC022007	22696	-	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	137090	-	BC112126|GLP1R|2740|glucagon-like peptide 1 receptor##BC113493|GLP1R|2740|glucagon-like peptide 1 receptor##NM_002062|GLP1R|2740|glucagon-like peptide 1 receptor##U01104|GLP1R|2740|glucagon-like peptide 1 receptor##L23503|GLP1R|2740|glucagon-like peptide 1 receptor##U01156|GLP1R|2740|glucagon-like peptide 1 receptor##U01157|GLP1R|2740|glucagon-like peptide 1 receptor##AF527621|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_001206927|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_006708|GLO1|2739|glyoxalase I##AF086405|C6orf64|55776|chromosome 6 open reading frame 64##CR627244|C6orf64|55776|chromosome 6 open reading frame 64##AK001963|C6orf64|55776|chromosome 6 open reading frame 64##NM_018322|C6orf64|55776|chromosome 6 open reading frame 64##EU832483|C6orf64|55776|chromosome 6 open reading frame 64##EU832563|C6orf64|55776|chromosome 6 open reading frame 64##BC022007|C6orf64|55776|chromosome 6 open reading frame 64##AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5	0.158458	
chr3	184007270	184007407	reg1018330.p1	7.292	+	BC142950 NM_001037324 NM_001100120 NM_001100121 TSC_hg19_v1_chr3_+_183993819 AB011176 AK296541 AF521189 AY359003 AF192531 AF428264 AK293713 BC146830 AB383918	-13470	+	TSC_hg19_v1_chr3_-_183979153 BC105077 BC105079 AY037149 NM_033259	-28062	-	TSC_hg19_v1_chr3_+_183967514 AF428263	-39821	+	TSC_hg19_v1_chr3_+_184017028 D78151 NM_002808 AL162014 AK315474 AK297256 BC002997	9672	+	TSC_hg19_v1_chr3_+_184017038 AB209843 BC002368 AB385107 BC007897 BT009736 X86446 U12596 CU675853	9758	+	TSC_hg19_v1_chr3_+_184032303 NM_001194946 NM_001194947 NM_198241 NM_198242 NM_198244	24941	+	BC142950|ECE2|9718|endothelin converting enzyme 2##NM_001037324|ECE2|9718|endothelin converting enzyme 2##NM_001100120|ECE2|9718|endothelin converting enzyme 2##NM_001100121|ECE2|9718|endothelin converting enzyme 2##AB011176|ECE2|9718|endothelin converting enzyme 2##AK296541|ECE2|9718|endothelin converting enzyme 2##AF521189|ECE2|9718|endothelin converting enzyme 2##AY359003|ECE2|9718|endothelin converting enzyme 2##AF192531|ECE2|9718|endothelin converting enzyme 2##AF428264|ECE2|9718|endothelin converting enzyme 2##AK293713|ECE2|9718|endothelin converting enzyme 2##BC146830|ECE2|9718|endothelin converting enzyme 2##BC105077|CAMK2N2|94032|calcium/calmodulin-dependent protein kinase II inhibitor 2##BC105079|CAMK2N2|94032|calcium/calmodulin-dependent protein kinase II inhibitor 2##AY037149|CAMK2N2|94032|calcium/calmodulin-dependent protein kinase II inhibitor 2##NM_033259|CAMK2N2|94032|calcium/calmodulin-dependent protein kinase II inhibitor 2##AF428263|ECE2|9718|endothelin converting enzyme 2##D78151|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##NM_002808|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##AL162014|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##AK315474|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##AK297256|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##BC002997|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##AB209843|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##BC002368|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##BC007897|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##BT009736|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##X86446|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##U12596|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##NM_001194946|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1##NM_001194947|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1##NM_198241|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1##NM_198242|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1##NM_198244|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	0.94227	CTCF.p2:15:0.942
chr11	57113235	57113331	reg1018828.p1	7.291	+	TSC_hg19_v1_chr11_+_57105826 NM_002559 BC069162 BC109287 BC074792 BC074793 AB016608	-7362	+	AB209132 BC091486 TSC_hg19_v1_chr11_-_57103354 M86737 NM_003146	-9934	-	TSC_hg19_v1_chr11_-_57092425 AB051528 BC150333 NM_033396 AK124903	-20908	-	AY358930 BC069126 AF132209 NM_006093	35329	-	M35670 X14088 AK312195 BC005929 M36805 Y00809 NM_001243245 NM_002728 X65787	44833	-	TSC_hg19_v1_chr11_-_57194537 AK311394 NM_014096	81248	-	NM_002559|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC069162|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC109287|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC074792|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC074793|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##AB016608|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##AB209132|SSRP1|6749|structure specific recognition protein 1##BC091486|SSRP1|6749|structure specific recognition protein 1##M86737|SSRP1|6749|structure specific recognition protein 1##NM_003146|SSRP1|6749|structure specific recognition protein 1##AB051528|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##BC150333|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##NM_033396|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AK124903|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AY358930|PRG3|10394|proteoglycan 3##BC069126|PRG3|10394|proteoglycan 3##AF132209|PRG3|10394|proteoglycan 3##NM_006093|PRG3|10394|proteoglycan 3##M35670|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##X14088|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##AK312195|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##BC005929|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##M36805|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##Y00809|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##NM_001243245|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##NM_002728|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##X65787|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##AK311394|SLC43A3|29015|solute carrier family 43, member 3##NM_014096|SLC43A3|29015|solute carrier family 43, member 3	0.992771	CTCF.p2:12:0.993
chr19	11354038	11354193	reg1020183.p1	7.291	+	TSC_hg19_v1_chr19_+_11350294 NM_018687 AY358356	-3819	+	TSC_hg19_v1_chr19_-_11308465 AK000011 AK225038	-45653	-	TSC_hg19_v1_chr19_-_11308222 BC082762 AB284125 NM_001136191	-45857	-	AB384597 TSC_hg19_v1_chr19_-_11373144 AB037816 BC146786 BC095483 NM_020812	19023	-	AF133424 NM_012466 BC029908	52718	+	AF081353 TSC_hg19_v1_chr19_-_11450305 BC016471 AK313538 NM_004283	96185	-	NM_018687|C19orf80|55908|chromosome 19 open reading frame 80##AY358356|C19orf80|55908|chromosome 19 open reading frame 80##AK000011|KANK2|25959|KN motif and ankyrin repeat domains 2##AK225038|KANK2|25959|KN motif and ankyrin repeat domains 2##BC082762|KANK2|25959|KN motif and ankyrin repeat domains 2##AB284125|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_001136191|KANK2|25959|KN motif and ankyrin repeat domains 2##AB037816|DOCK6|57572|dedicator of cytokinesis 6##BC146786|DOCK6|57572|dedicator of cytokinesis 6##BC095483|DOCK6|57572|dedicator of cytokinesis 6##NM_020812|DOCK6|57572|dedicator of cytokinesis 6##NM_012466|TSPAN16|26526|tetraspanin 16##BC029908|TSPAN16|26526|tetraspanin 16##AF081353|RAB3D|9545|RAB3D, member RAS oncogene family##BC016471|RAB3D|9545|RAB3D, member RAS oncogene family##AK313538|RAB3D|9545|RAB3D, member RAS oncogene family##NM_004283|RAB3D|9545|RAB3D, member RAS oncogene family	0.999176	CTCF.p2:25:0.999
chr19	53863893	53864014	reg1020114.p2	7.291	+	AK295079 NM_138374 TSC_hg19_v1_chr19_+_53837011	-26942	+	NM_033341 AF420440	-69077	-	NM_001195187	-79143	+	TSC_hg19_v1_chr19_+_53898385 NM_001040185	34438	+	TSC_hg19_v1_chr19_+_53898401 AK316300 BX647981 AK295840	34451	+	TSC_hg19_v1_chr19_+_53898427 BC140724 BC017357	34472	+	AK295079|ZNF845|91664|zinc finger protein 845##NM_138374|ZNF845|91664|zinc finger protein 845##NM_033341|BIRC8|112401|baculoviral IAP repeat containing 8##AF420440|BIRC8|112401|baculoviral IAP repeat containing 8##NM_001195187|LOC646508|646508|family with sequence similarity 90, member A1-like##NM_001040185|ZNF765|91661|zinc finger protein 765##AK316300|ZNF765|91661|zinc finger protein 765##BX647981|ZNF765|91661|zinc finger protein 765##AK295840|ZNF765|91661|zinc finger protein 765##BC140724|ZNF765|91661|zinc finger protein 765##BC017357|ZNF765|91661|zinc finger protein 765	0.830069	CTCF.p2:16:0.830
chr2	162079779	162079912	reg1022305.p1	7.291	+	TSC_hg19_v1_chr2_+_162016938 AK313096 NM_001199135 BC067779	-62896	+	NM_004180 NM_133484 U59863 U63830	-86380	+	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	-729528	-	NM_005805 TSC_hg19_v1_chr2_+_162164936 BC066336	85017	+	TSC_hg19_v1_chr2_+_162164996 U86782	85178	+	NM_006593 BC104844 BC113418 TSC_hg19_v1_chr2_+_162272726	192836	+	AK313096|TANK|10010|TRAF family member-associated NFKB activator##NM_001199135|TANK|10010|TRAF family member-associated NFKB activator##BC067779|TANK|10010|TRAF family member-associated NFKB activator##NM_004180|TANK|10010|TRAF family member-associated NFKB activator##NM_133484|TANK|10010|TRAF family member-associated NFKB activator##U59863|TANK|10010|TRAF family member-associated NFKB activator##U63830|TANK|10010|TRAF family member-associated NFKB activator##BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_005805|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##BC066336|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##U86782|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##NM_006593|TBR1|10716|T-box, brain, 1##BC104844|TBR1|10716|T-box, brain, 1##BC113418|TBR1|10716|T-box, brain, 1	0.026897	
chr2	27946283	27946412	reg1020079.p1	7.291	+	TSC_hg19_v1_chr2_+_27886755 AK300958	-59577	+	BC074000 AB018307 NM_014860 AF197954 AK000329 AK304889 BC045638 AF224759 TSC_hg19_v1_chr2_-_27886542	-59855	-	AK001486 NM_018158 BC098302 BC098358 BC099711 BC099739 AY028435	-59998	+	TSC_hg19_v1_chr2_+_27994585 BC090047 NM_004891 NM_145330	48236	+	TSC_hg19_v1_chr2_+_27994614 BC020834 AF047440 BC087846 BC009475 CR456888 CR542117	48315	+	CU675980 AK300989 TSC_hg19_v1_chr2_-_28113253 AJ404857 NM_022128 BX648909 AY643715 BC017425	166903	-	AK300958|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC074000|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AB018307|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##NM_014860|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AF197954|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AK000329|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AK304889|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##BC045638|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AF224759|SUPT7L|9913|suppressor of Ty 7 (S. cerevisiae)-like##AK001486|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##NM_018158|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC098302|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC098358|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC099711|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC099739|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##AY028435|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##BC090047|MRPL33|9553|mitochondrial ribosomal protein L33##NM_004891|MRPL33|9553|mitochondrial ribosomal protein L33##NM_145330|MRPL33|9553|mitochondrial ribosomal protein L33##BC020834|MRPL33|9553|mitochondrial ribosomal protein L33##AF047440|MRPL33|9553|mitochondrial ribosomal protein L33##BC087846|MRPL33|9553|mitochondrial ribosomal protein L33##BC009475|MRPL33|9553|mitochondrial ribosomal protein L33##CR456888|MRPL33|9553|mitochondrial ribosomal protein L33##CR542117|MRPL33|9553|mitochondrial ribosomal protein L33##AK300989|RBKS|64080|ribokinase##AJ404857|RBKS|64080|ribokinase##NM_022128|RBKS|64080|ribokinase##BX648909|RBKS|64080|ribokinase##AY643715|RBKS|64080|ribokinase##BC017425|RBKS|64080|ribokinase	0.291484	CTCF.p2:-5:0.291
chrX	130875102	130875282	reg1015620.p1	7.291	+	BC137050 AB529233 NM_001004486	-197194	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-451780	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-451930	-	TSC_hg19_v1_chrX_-_130964633 AK097911	89459	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	282129	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	282448	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.047392	
chr16	28386562	28386670	reg1019429.p1	7.290	+	TSC_hg19_v1_chr16_+_28303845 AY874862 NM_001024401	-82835	+	TSC_hg19_v1_chr16_-_28303389 AK091456 AX746995	-83238	-	TSC_hg19_v1_chr16_-_28223181 AB002368 NM_015171	-163441	-	DQ891632 DQ894822 AB527254 BC157849 BC071705 AK000739 AK293264 AY762099 TSC_hg19_v1_chr16_-_28415133 BC000533 BC001571	28425	-	AK055366 AK299421 AK303790 AK304500 TSC_hg19_v1_chr16_-_28415162 AK301233 AK301183 NM_001099661 BC107692 NM_001037808 NM_003752	28541	-	BC157842 AK292155 NM_001199142	51102	-	AY874862|SBK1|388228|SH3-binding domain kinase 1##NM_001024401|SBK1|388228|SH3-binding domain kinase 1##AB002368|XPO6|23214|exportin 6##NM_015171|XPO6|23214|exportin 6##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C	0.0	
chr2	226754168	226754289	reg1018023.p1	7.290	+	NM_020864 BC131727 AB040919	-488583	+	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	-846880	-	TSC_hg19_v1_chr2_-_225811768 EU236710	-942474	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	909251	-	TSC_hg19_v1_chr2_-_227664534 S62539	910271	-	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	946502	+	NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##EU236710|DOCK10|55619|dedicator of cytokinesis 10##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##S62539|IRS1|3667|insulin receptor substrate 1##NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1	0.024439	
chr10	86475754	86475884	reg1021339.p1	7.289	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-291124	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-344201	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-387425	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	1650444	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	1805675	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	1805711	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.984984	CTCF.p2:-5:0.985
chr3	131972214	131972395	reg1019785.p1	7.289	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	-218464	-	TSC_hg19_v1_chr3_-_131221816 CR456720 CU678442 BC002345 X06323 BC003375 AK301377 AK296626 NM_007208	-750550	-	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	-871653	+	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	63934	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	63984	+	AB014578 BC151246 TSC_hg19_v1_chr3_+_132136540 AY779857 BC043583 NM_015268	164223	+	AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##CR456720|MRPL3|11222|mitochondrial ribosomal protein L3##X06323|MRPL3|11222|mitochondrial ribosomal protein L3##BC003375|MRPL3|11222|mitochondrial ribosomal protein L3##AK301377|MRPL3|11222|mitochondrial ribosomal protein L3##AK296626|MRPL3|11222|mitochondrial ribosomal protein L3##NM_007208|MRPL3|11222|mitochondrial ribosomal protein L3##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate##AB014578|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC151246|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AY779857|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC043583|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##NM_015268|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13	0.968658	CTCF.p2:-4:0.969
chr13	103377335	103377439	reg1018141.p1	7.288	+	HQ258371 NM_001010977 BC132748 BC132750	-30529	-	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	-128051	+	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	-323312	-	NM_001146197	34034	-	TSC_hg19_v1_chr13_-_103426120 AK314995	48711	-	TSC_hg19_v1_chr13_-_103426133 BC048011 BC015148	48750	-	HQ258371|METTL21C|196541|methyltransferase like 21C##NM_001010977|METTL21C|196541|methyltransferase like 21C##BC132748|METTL21C|196541|methyltransferase like 21C##BC132750|METTL21C|196541|methyltransferase like 21C##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II##BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_001146197|CCDC168|643677|coiled-coil domain containing 168##AK314995|C13orf27|93081|chromosome 13 open reading frame 27##BC048011|C13orf27|93081|chromosome 13 open reading frame 27##BC015148|C13orf27|93081|chromosome 13 open reading frame 27	0.329384	CTCF.p2:15:0.329
chr16	86077949	86078042	reg1017172.p1	7.288	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-145209	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-244660	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-244690	+	TSC_hg19_v1_chr16_-_86542463 AK091834	464469	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	466161	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	466245	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	1.605181	CTCF.p2:1:0.997	CTCF.p2:79:0.608
chr1	202153925	202154053	reg1020296.p1	7.287	+	TSC_hg19_v1_chr1_-_202130715 AK127214 AK302869 NM_001199797 NM_002832	-23288	-	TSC_hg19_v1_chr1_-_202129731 AK301051 AK301757 AK311661 AK293186 AK301980	-24245	-	M64322 TSC_hg19_v1_chr1_-_202129719 AK225920 D11327	-24275	-	NM_001017403 AB049405	9185	+	AY358119 BC038795 NM_021636 BC047905	18903	+	AF190501 NM_001017404	29293	+	AK127214|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK302869|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_001199797|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_002832|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301051|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301757|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK311661|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK293186|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301980|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##M64322|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK225920|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##D11327|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_001017403|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AB049405|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AY358119|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC038795|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_021636|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC047905|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AF190501|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_001017404|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6	0.997798	CTCF.p2:0:0.998
chr21	45667432	45667560	reg1018879.p1	7.287	+	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	-6639	-	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	-6730	-	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-113935	+	AF194032 NM_013369 NM_175867	14602	-	BC142608 AK309572 AB006682 NM_000383 Z97990	38248	+	AB006683 AB006685 BC137268 BC137270 NM_000658	42714	+	AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##BC142608|AIRE|326|autoimmune regulator##AK309572|AIRE|326|autoimmune regulator##AB006682|AIRE|326|autoimmune regulator##NM_000383|AIRE|326|autoimmune regulator##Z97990|AIRE|326|autoimmune regulator##AB006683|AIRE|326|autoimmune regulator##AB006685|AIRE|326|autoimmune regulator##BC137268|AIRE|326|autoimmune regulator##BC137270|AIRE|326|autoimmune regulator##NM_000658|AIRE|326|autoimmune regulator	0.14109	
chr4	101770149	101770292	reg1018436.p2	7.287	+	CU676062 AB590686 AB034695 AK222741 AK304568 AK291831 BC017781 AF205940 AK026875 AK313504 NM_001159694 NM_016242	-331060	-	AL832277 BC013592 TSC_hg19_v1_chr4_-_101111626 AK312926 AK094236 NM_145244	-658590	-	TSC_hg19_v1_chr4_+_100871641 AK123926	-898574	+	AB385587 AB451338 AB451487 AM393486 AM393713 CU693026 AY904364 BC025714 TSC_hg19_v1_chr4_-_102268080 L14778	497806	-	TSC_hg19_v1_chr4_-_102268343 AL353950	498152	-	AK290532 TSC_hg19_v1_chr4_-_102268547	498295	-	AB034695|EMCN|51705|endomucin##AK222741|EMCN|51705|endomucin##AK304568|EMCN|51705|endomucin##AK291831|EMCN|51705|endomucin##BC017781|EMCN|51705|endomucin##AF205940|EMCN|51705|endomucin##AK026875|EMCN|51705|endomucin##AK313504|EMCN|51705|endomucin##NM_001159694|EMCN|51705|endomucin##NM_016242|EMCN|51705|endomucin##AL832277|DDIT4L|115265|DNA-damage-inducible transcript 4-like##BC013592|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK312926|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK094236|DDIT4L|115265|DNA-damage-inducible transcript 4-like##NM_145244|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK123926|LOC256880|256880|uncharacterized LOC256880##AB451338|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AB451487|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393486|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393713|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AY904364|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##BC025714|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##L14778|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AL353950|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AK290532|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	0.036609	
chr8	6786208	6786330	reg1021579.p1	7.287	+	M98331 BC093951 BC093953 BC069667 BC069710 BC069728 BC069769 NM_001926	-2684	-	BC033298 BC047677 X92744 U73945 NM_005218	-50786	-	AY534243 AY358489 AY534242 NM_207411	-93177	-	BC093959 BC112091 NM_001925 X65977	9515	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	51321	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	70431	-	M98331|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093951|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093953|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069667|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069710|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069728|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069769|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##NM_001926|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC033298|DEFB1|1672|defensin, beta 1##BC047677|DEFB1|1672|defensin, beta 1##X92744|DEFB1|1672|defensin, beta 1##U73945|DEFB1|1672|defensin, beta 1##NM_005218|DEFB1|1672|defensin, beta 1##AY534243|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY358489|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY534242|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##NM_207411|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##BC093959|DEFA4|1669|defensin, alpha 4, corticostatin##BC112091|DEFA4|1669|defensin, alpha 4, corticostatin##NM_001925|DEFA4|1669|defensin, alpha 4, corticostatin##X65977|DEFA4|1669|defensin, alpha 4, corticostatin##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1	0.272482	CTCF.p2:3:0.272
chr5	179402318	179402437	reg1019142.p1	7.286	+	TSC_hg19_v1_chr5_-_179334854 AB014576 BC129994 NM_015043 NM_198868	-67525	-	AB449893 TSC_hg19_v1_chr5_-_179334837 AB463306	-67547	-	TSC_hg19_v1_chr5_+_179286046 BC040901	-116382	+	AK313089 BC017100 TSC_hg19_v1_chr5_-_179498743 BC082267	96314	-	TSC_hg19_v1_chr5_-_179499095 BC113864 BC114472 AB209800 AY083998 NM_018434 BC108306	96688	-	TSC_hg19_v1_chr5_-_179636160 NM_175062 BC036802	233799	-	AB014576|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##BC129994|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_015043|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_198868|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##AB449893|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##AK313089|RNF130|55819|ring finger protein 130##BC017100|RNF130|55819|ring finger protein 130##BC082267|RNF130|55819|ring finger protein 130##BC113864|RNF130|55819|ring finger protein 130##BC114472|RNF130|55819|ring finger protein 130##AB209800|RNF130|55819|ring finger protein 130##AY083998|RNF130|55819|ring finger protein 130##NM_018434|RNF130|55819|ring finger protein 130##BC108306|RNF130|55819|ring finger protein 130##NM_175062|RASGEF1C|255426|RasGEF domain family, member 1C##BC036802|RASGEF1C|255426|RasGEF domain family, member 1C	0.917068	CTCF.p2:0:0.917
chr1	155023056	155023179	reg1017701.p1	7.285	+	AK301935 NM_001143687 NM_152494 AK057347 AK301902 AK301876 BC064844	-16754	+	BC111794 AK057496 NM_144622	-16872	-	NM_001252406 TSC_hg19_v1_chr1_+_154975235 AK304762	-47870	+	TSC_hg19_v1_chr1_+_155023771 AK000667 AY560593 AY560594 AY560595 AY560596 AY560597 AY560598 AY560599 AY560600 AY560601 AY576417 NM_003815 NM_207191 NM_207194 NM_207195 NM_207196 NM_207197	642	+	BC014566 TSC_hg19_v1_chr1_+_155023791 AK075498	675	+	TSC_hg19_v1_chr1_+_155023819 AK308172 AK295614 AK296925 AK297468 U41767 EU176173 AB590397 AY518542 BT009764 U46005	719	+	AK301935|DCST1|149095|DC-STAMP domain containing 1##NM_001143687|DCST1|149095|DC-STAMP domain containing 1##NM_152494|DCST1|149095|DC-STAMP domain containing 1##AK057347|DCST1|149095|DC-STAMP domain containing 1##AK301902|DCST1|149095|DC-STAMP domain containing 1##AK301876|DCST1|149095|DC-STAMP domain containing 1##BC064844|DCST1|149095|DC-STAMP domain containing 1##BC111794|DCST2|127579|DC-STAMP domain containing 2##AK057496|DCST2|127579|DC-STAMP domain containing 2##NM_144622|DCST2|127579|DC-STAMP domain containing 2##NM_001252406|ZBTB7B|51043|zinc finger and BTB domain containing 7B##AK304762|ZBTB7B|51043|zinc finger and BTB domain containing 7B##AK000667|ADAM15|8751|ADAM metallopeptidase domain 15##AY560593|ADAM15|8751|ADAM metallopeptidase domain 15##AY560594|ADAM15|8751|ADAM metallopeptidase domain 15##AY560595|ADAM15|8751|ADAM metallopeptidase domain 15##AY560596|ADAM15|8751|ADAM metallopeptidase domain 15##AY560597|ADAM15|8751|ADAM metallopeptidase domain 15##AY560598|ADAM15|8751|ADAM metallopeptidase domain 15##AY560599|ADAM15|8751|ADAM metallopeptidase domain 15##AY560600|ADAM15|8751|ADAM metallopeptidase domain 15##AY560601|ADAM15|8751|ADAM metallopeptidase domain 15##AY576417|ADAM15|8751|ADAM metallopeptidase domain 15##NM_003815|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207191|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207194|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207195|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207196|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207197|ADAM15|8751|ADAM metallopeptidase domain 15##BC014566|ADAM15|8751|ADAM metallopeptidase domain 15##AK075498|ADAM15|8751|ADAM metallopeptidase domain 15##AK308172|ADAM15|8751|ADAM metallopeptidase domain 15##AK295614|ADAM15|8751|ADAM metallopeptidase domain 15##AK296925|ADAM15|8751|ADAM metallopeptidase domain 15##AK297468|ADAM15|8751|ADAM metallopeptidase domain 15##U41767|ADAM15|8751|ADAM metallopeptidase domain 15##EU176173|ADAM15|8751|ADAM metallopeptidase domain 15##AY518542|ADAM15|8751|ADAM metallopeptidase domain 15##BT009764|ADAM15|8751|ADAM metallopeptidase domain 15##U46005|ADAM15|8751|ADAM metallopeptidase domain 15	0.975143	CTCF.p2:-17:0.975
chr3	186258242	186258423	reg1001118.p1	7.285	+	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	-178398	-	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	-431476	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	-431986	-	CU686840 AF161703 BC069478 AK314172 NM_017541	3808	-	TSC_hg19_v1_chr3_-_186285118 AK001422 BC025748	26776	-	NM_018138 TSC_hg19_v1_chr3_-_186285140	26809	-	BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa##BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##AF161703|CRYGS|1427|crystallin, gamma S##BC069478|CRYGS|1427|crystallin, gamma S##AK314172|CRYGS|1427|crystallin, gamma S##NM_017541|CRYGS|1427|crystallin, gamma S##AK001422|TBCCD1|55171|TBCC domain containing 1##BC025748|TBCCD1|55171|TBCC domain containing 1##NM_018138|TBCCD1|55171|TBCC domain containing 1	0.0	
chr5	50676583	50676695	reg1018052.p1	7.285	+	TSC_hg19_v1_chr5_+_49962920 AB463183 AM393004	-713712	+	NM_001178056 NM_024615 AK289369 TSC_hg19_v1_chr5_+_49962800 AL834477 BC075801	-713848	+	AK298680 AK314466 BC105789 NM_001178055	-714907	+	BC031213 NM_002202	2318	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	2614	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	1407350	+	AM393004|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178056|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_024615|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK289369|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AL834477|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC075801|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC031213|ISL1|3670|ISL LIM homeobox 1##NM_002202|ISL1|3670|ISL LIM homeobox 1##AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1	0.610288	CTCF.p2:4:0.610
chr4	168211972	168212077	reg1018013.p2	7.284	+	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	-56284	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	-56320	-	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	-56413	-	NM_007193 BC007320 AF196478 AJ238979 CU675613 EU176730	801745	+	TSC_hg19_v1_chr4_-_169239951 AK001649 BC038115 AK307404 NM_017631	1027881	-	TSC_hg19_v1_chr4_-_169401573 AK096369	1189556	-	AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_007193|ANXA10|11199|annexin A10##BC007320|ANXA10|11199|annexin A10##AF196478|ANXA10|11199|annexin A10##AJ238979|ANXA10|11199|annexin A10##EU176730|ANXA10|11199|annexin A10##AK001649|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##BC038115|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##AK307404|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##NM_017631|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##AK096369|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like	0.829553	CTCF.p2:10:0.830
chr4	72419459	72419566	reg1018819.p2	7.284	+	BC030977 NM_003759 AF007216 AK308038 CU689062	-214645	+	AF069510 AB470072 AF053753 AF053754 AF310248 EF531618 TSC_hg19_v1_chr4_+_72102322	-317226	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	-366789	+	AB591002 CU691194 M12654 TSC_hg19_v1_chr4_-_72649797 AK290827 AK298433 AK312971 BC057228 BC022310 X03178 AK315853 NM_000583	230394	-	AK309595 NM_001204307	250245	-	AK223458 NM_001204306	251724	-	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK290827|GC|2638|group-specific component (vitamin D binding protein)##AK298433|GC|2638|group-specific component (vitamin D binding protein)##AK312971|GC|2638|group-specific component (vitamin D binding protein)##BC057228|GC|2638|group-specific component (vitamin D binding protein)##BC022310|GC|2638|group-specific component (vitamin D binding protein)##X03178|GC|2638|group-specific component (vitamin D binding protein)##AK315853|GC|2638|group-specific component (vitamin D binding protein)##NM_000583|GC|2638|group-specific component (vitamin D binding protein)##AK309595|GC|2638|group-specific component (vitamin D binding protein)##NM_001204307|GC|2638|group-specific component (vitamin D binding protein)##AK223458|GC|2638|group-specific component (vitamin D binding protein)##NM_001204306|GC|2638|group-specific component (vitamin D binding protein)	0.0	
chr4	77299270	77299405	reg1020828.p1	7.284	+	TSC_hg19_v1_chr4_+_77227894 DQ891974 DQ895165 CU692542	-71436	+	TSC_hg19_v1_chr4_+_77227851 AF062534 AK074635 BC022301	-71507	+	AK123795 NM_003943	-72159	+	BC035224 NM_001042784	29120	-	AB055660 NM_020859	56915	+	AK027744 TSC_hg19_v1_chr4_+_77610613	311274	+	DQ891974|STBD1|8987|starch binding domain 1##DQ895165|STBD1|8987|starch binding domain 1##AF062534|STBD1|8987|starch binding domain 1##AK074635|STBD1|8987|starch binding domain 1##BC022301|STBD1|8987|starch binding domain 1##AK123795|STBD1|8987|starch binding domain 1##NM_003943|STBD1|8987|starch binding domain 1##BC035224|CCDC158|339965|coiled-coil domain containing 158##NM_001042784|CCDC158|339965|coiled-coil domain containing 158##AB055660|SHROOM3|57619|shroom family member 3##NM_020859|SHROOM3|57619|shroom family member 3##AK027744|SHROOM3|57619|shroom family member 3	0.142602	
chr8	71657881	71658021	reg1017470.p1	7.284	+	AY534247 BC111381 NM_001011720 BC151845 BC137104 BC137105	-76311	+	TSC_hg19_v1_chr8_-_71581419 BC000878 BC008505 NM_016027	-76502	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	-76567	-	AF467247 BC121798 BC121799 AJ000097 NM_172058 NM_172059 NM_172060	610898	-	AK127798 AK295897 TSC_hg19_v1_chr8_-_72274006	616034	-	TSC_hg19_v1_chr8_-_72274302 AK307379	616342	-	AY534247|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC111381|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##NM_001011720|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC151845|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137104|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137105|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC000878|LACTB2|51110|lactamase, beta 2##BC008505|LACTB2|51110|lactamase, beta 2##NM_016027|LACTB2|51110|lactamase, beta 2##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2##AF467247|EYA1|2138|eyes absent homolog 1 (Drosophila)##BC121798|EYA1|2138|eyes absent homolog 1 (Drosophila)##BC121799|EYA1|2138|eyes absent homolog 1 (Drosophila)##AJ000097|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172058|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172059|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172060|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)	0.996432	CTCF.p2:-17:0.996
chr1	14761888	14762025	reg1021820.p1	7.283	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-686015	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-686033	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-686071	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	163238	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	488763	+	AY505121 NM_001018001	494339	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.960203	CTCF.p2:-2:0.960
chr1	175343058	175343202	reg1017457.p1	7.283	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-181100	-	AK127044 NM_022093	-306137	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-350559	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	369580	-	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	833035	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	833188	-	D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2	0.664319	CTCF.p2:-5:0.664
chr12	116997672	116997852	reg1018987.p4	7.283	+	NM_001085481	-577	+	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	-26533	+	TSC_hg19_v1_chr12_-_116715263 AY338463	-282602	-	TSC_hg19_v1_chr12_-_117175822 AK309652 BC019843 AK025068 NM_024738	177976	-	TSC_hg19_v1_chr12_-_117175868 AK222983 AK298857	178107	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	178357	+	NM_001085481|MAP1LC3B2|643246|microtubule-associated protein 1 light chain 3 beta 2##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173##AY338463|MED13L|23389|mediator complex subunit 13-like##AK309652|C12orf49|79794|chromosome 12 open reading frame 49##BC019843|C12orf49|79794|chromosome 12 open reading frame 49##AK025068|C12orf49|79794|chromosome 12 open reading frame 49##NM_024738|C12orf49|79794|chromosome 12 open reading frame 49##AK222983|C12orf49|79794|chromosome 12 open reading frame 49##AK298857|C12orf49|79794|chromosome 12 open reading frame 49##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2	0.0	
chr14	21341910	21342021	reg1018749.p1	7.283	+	TSC_hg19_v1_chr14_-_21271004 AK312100 BC022882 BC005324 NM_002933 NM_198234 NM_198235	-70947	-	AK098375 NM_198232	-71418	-	BC020848 NM_005615 AK313580	-92747	+	TSC_hg19_v1_chr14_+_21359543 NM_002935 X15161 M28128 BC096060 BC096061 BC096062	17594	+	TSC_hg19_v1_chr14_+_21423628 NM_002934 X55988 BC093678 BC093680 M28129 M24157 BC096059 M30510	81683	+	NM_001029991 NM_022734	115999	+	AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##AK098375|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198232|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC020848|RNASE6|6039|ribonuclease, RNase A family, k6##NM_005615|RNASE6|6039|ribonuclease, RNase A family, k6##AK313580|RNASE6|6039|ribonuclease, RNase A family, k6##NM_002935|RNASE3|6037|ribonuclease, RNase A family, 3##X15161|RNASE3|6037|ribonuclease, RNase A family, 3##M28128|RNASE3|6037|ribonuclease, RNase A family, 3##BC096060|RNASE3|6037|ribonuclease, RNase A family, 3##BC096061|RNASE3|6037|ribonuclease, RNase A family, 3##BC096062|RNASE3|6037|ribonuclease, RNase A family, 3##NM_002934|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##X55988|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093678|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093680|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M28129|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M24157|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC096059|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M30510|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##NM_001029991|METTL17|64745|methyltransferase like 17##NM_022734|METTL17|64745|methyltransferase like 17	0.965272	CTCF.p2:0:0.965
chr5	142295508	142295636	reg1017974.p1	7.283	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-145264	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-145600	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-218001	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	487251	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	487534	-	BC015610 TSC_hg19_v1_chr5_-_142783214	487639	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.971819	CTCF.p2:8:0.972
chr5	57794328	57794462	reg1017972.p1	7.283	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	-7101	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	-38459	-	BC137470 BC137473 BX648504 NM_001017992	-1015801	-	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	84524	+	BC036319 NM_001197223	501363	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	540983	-	AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.614643	CTCF.p2:-33:0.254	CTCF.p2:-49:0.361
chrX	70889971	70890072	reg1019268.p1	7.282	+	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	-51689	-	NM_052957	-92148	+	TSC_hg19_v1_chrX_+_70765496 AL050366	-124499	+	NM_001145139 NM_001145140	48113	-	NM_001145139 NM_001145140	93118	+	TSC_hg19_v1_chrX_+_71130694 NM_001013627	240757	+	AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_052957|ACRC|93953|acidic repeat containing##AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001013627|NHSL2|340527|NHS-like 2	0.983363	CTCF.p2:-1:0.983
chr21	43394237	43394418	reg1021638.p2	7.281	+	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	-20244	-	BC062323 AL833323 NM_199050	-47538	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	-94829	-	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	36144	-	AB051810 AB051811 NM_001199527 NM_001199528	88740	+	AB096965 AY771619 AY771620 NM_001004416 NM_173568	97098	+	AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1	0.0	
chr3	115533745	115533866	reg1018579.p1	7.281	+	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-191386	+	NM_001130064 NM_002045	-191655	+	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	-667691	-	AK315286 TSC_hg19_v1_chr3_-_116164338	630526	-	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	630568	-	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	3219728	-	AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43##BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315286|LSAMP|4045|limbic system-associated membrane protein##BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11	0.998587	CTCF.p2:13:0.999
chr5	96333117	96333227	reg1019532.p2	7.281	+	U62769 NM_175920	-39018	+	TSC_hg19_v1_chr5_+_96271783 U62768 AK314226 BC111718 BC113117 BC028692	-61378	+	NM_005575 D50810	-61806	+	BC036467 TSC_hg19_v1_chr5_-_96478440	145270	-	AK307885 TSC_hg19_v1_chr5_-_96478482	145303	-	AK291034 TSC_hg19_v1_chr5_-_96478504 NM_153234 AK098400	145366	-	U62769|LNPEP|4012|leucyl/cystinyl aminopeptidase##NM_175920|LNPEP|4012|leucyl/cystinyl aminopeptidase##U62768|LNPEP|4012|leucyl/cystinyl aminopeptidase##AK314226|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC111718|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC113117|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC028692|LNPEP|4012|leucyl/cystinyl aminopeptidase##NM_005575|LNPEP|4012|leucyl/cystinyl aminopeptidase##D50810|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC036467|LIX1|167410|Lix1 homolog (chicken)##AK307885|LIX1|167410|Lix1 homolog (chicken)##AK291034|LIX1|167410|Lix1 homolog (chicken)##NM_153234|LIX1|167410|Lix1 homolog (chicken)##AK098400|LIX1|167410|Lix1 homolog (chicken)	0.786963	CTCF.p2:-15:0.787
chr13	25579438	25579546	reg1004152.p2	7.280	+	TSC_hg19_v1_chr13_-_25497054 NM_018451	-82423	-	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	-82523	-	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	-241173	+	NM_030979 AL136900 AK313336 BC045608 BC027617 AF132026 DQ892103 DQ895297	90813	+	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	166168	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	166325	-	NM_018451|CENPJ|55835|centromere protein J##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##NM_030979|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AL136900|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK313336|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC045608|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC027617|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AF132026|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ892103|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ895297|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A	0.974946	CTCF.p2:14:0.975
chr6	110374968	110375081	reg1017372.p1	7.280	+	BC126301 BC117298 BC043414 NM_005284 HQ258210 HQ258216 HQ709190 HQ709191	-74768	+	TSC_hg19_v1_chr6_+_110012521 AK222732	-362500	+	TSC_hg19_v1_chr6_+_110012514 AK291671 AK293422 D87464	-362516	+	TSC_hg19_v1_chr6_-_110500864 BC019019 BC021022 BC044591 AK097838 BC068546	125819	-	TSC_hg19_v1_chr6_-_110501166 NM_001024934 NM_001024935 NM_001024936 NM_003931	126161	-	TSC_hg19_v1_chr6_+_110501629 AF038392 NM_015891 BC117145 BC126114 AK314601 AK222721 BC018059 AK295055 AB528038 HQ258473 AB208903 AF061241 AF015044	126599	+	BC126301|GPR6|2830|G protein-coupled receptor 6##BC117298|GPR6|2830|G protein-coupled receptor 6##BC043414|GPR6|2830|G protein-coupled receptor 6##NM_005284|GPR6|2830|G protein-coupled receptor 6##HQ258210|GPR6|2830|G protein-coupled receptor 6##HQ258216|GPR6|2830|G protein-coupled receptor 6##HQ709190|GPR6|2830|G protein-coupled receptor 6##AK222732|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK291671|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK293422|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##D87464|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##BC044591|WASF1|8936|WAS protein family, member 1##AK097838|WASF1|8936|WAS protein family, member 1##BC068546|WASF1|8936|WAS protein family, member 1##NM_001024934|WASF1|8936|WAS protein family, member 1##NM_001024935|WASF1|8936|WAS protein family, member 1##NM_001024936|WASF1|8936|WAS protein family, member 1##NM_003931|WASF1|8936|WAS protein family, member 1##AF038392|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##NM_015891|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC117145|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##BC126114|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK314601|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK222721|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AK295055|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##HQ258473|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AB208903|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AF061241|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)##AF015044|CDC40|51362|cell division cycle 40 homolog (S. cerevisiae)	0.798706	CTCF.p2:4:0.799
chr12	8549367	8549488	reg1019028.p1	7.279	+	BC042608 AK001270 NM_018088	-169224	-	TSC_hg19_v1_chr12_+_8332811 AK096301 BC048994 AK311411 BC034777	-216601	+	NM_001004328	-224278	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	59175	+	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	116804	+	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	144047	-	BC042608|FAM90A1|55138|family with sequence similarity 90, member A1##AK001270|FAM90A1|55138|family with sequence similarity 90, member A1##NM_018088|FAM90A1|55138|family with sequence similarity 90, member A1##AK096301|FAM66C|440078|family with sequence similarity 66, member C##BC048994|FAM66C|440078|family with sequence similarity 66, member C##BC034777|FAM66C|440078|family with sequence similarity 66, member C##NM_001004328|ZNF705A|440077|zinc finger protein 705A##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E	0.999894	CTCF.p2:-18:1.000
chr6	37673335	37673442	reg1015170.p2	7.279	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	-7682	-	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-205692	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-205736	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	113902	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	114302	+	BC101354 BC101355 BC101356 BC101357 AK057507 NM_001172418 NM_152733	890414	-	AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3##BC101354|BTBD9|114781|BTB (POZ) domain containing 9##BC101355|BTBD9|114781|BTB (POZ) domain containing 9##BC101356|BTBD9|114781|BTB (POZ) domain containing 9##BC101357|BTBD9|114781|BTB (POZ) domain containing 9##AK057507|BTBD9|114781|BTB (POZ) domain containing 9##NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9##NM_152733|BTBD9|114781|BTB (POZ) domain containing 9	0.260814	CTCF.p2:-13:0.261
chr10	60994727	60994865	reg1020743.p1	7.278	+	AL365474 NM_001143774 AM393181	-57508	+	BC011268 AK054956 TSC_hg19_v1_chr10_+_60936573 AB384640 AM392743	-58236	+	AL834339 NM_032439 TSC_hg19_v1_chr10_+_60936408 CR749429	-58408	+	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	127489	-	AK299924 NM_001143773	127864	-	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	474928	-	AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)	0.996522	CTCF.p2:-9:0.997
chr5	53287887	53288019	reg1020383.p1	7.277	+	TSC_hg19_v1_chr5_+_52856474 AF020351 AK307973 CU675075	-431467	+	TSC_hg19_v1_chr5_+_52856468 NM_002495 BC005270	-431489	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	-511403	+	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	318372	-	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	318449	-	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	463571	+	AF020351|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK307973|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##NM_002495|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##BC005270|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3	0.362843	CTCF.p2:27:0.363
chr12	122820717	122820814	reg1018641.p1	7.275	+	TSC_hg19_v1_chr12_-_122751044 NM_022916	-69710	-	AB527663 EU176253 TSC_hg19_v1_chr12_-_122750984 AL833244 BC016617 AF439857 AK026840 AK315545	-69767	-	BC046209 NM_019887 NM_138929	-108722	-	AF045652 AF045653 AY563000 TSC_hg19_v1_chr12_-_122839059	18272	-	X64838 TSC_hg19_v1_chr12_-_122907155 M97501 NM_001247997 NM_002956 NM_198240	86472	-	TSC_hg19_v1_chr12_-_122985404 BC065918	164662	-	NM_022916|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##EU176253|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##BC016617|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##AF439857|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##AK026840|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##AK315545|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##BC046209|DIABLO|56616|diablo, IAP-binding mitochondrial protein##NM_019887|DIABLO|56616|diablo, IAP-binding mitochondrial protein##NM_138929|DIABLO|56616|diablo, IAP-binding mitochondrial protein##AF045652|CLIP1|6249|CAP-GLY domain containing linker protein 1##AF045653|CLIP1|6249|CAP-GLY domain containing linker protein 1##AY563000|CLIP1|6249|CAP-GLY domain containing linker protein 1##X64838|CLIP1|6249|CAP-GLY domain containing linker protein 1##M97501|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_001247997|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_002956|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_198240|CLIP1|6249|CAP-GLY domain containing linker protein 1##BC065918|ZCCHC8|55596|zinc finger, CCHC domain containing 8	0.823017	CTCF.p2:0:0.823
chr13	85418746	85418891	reg1021544.p1	7.275	+	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-962318	-	TSC_hg19_v1_chr13_-_84456424 BC051738	-962393	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-4503754	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	954621	-	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	2906051	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	6632086	+	AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5	0.0	
chr18	77912270	77912399	reg1020391.p1	7.275	+	TSC_hg19_v1_chr18_+_77905812 AK056304	-6467	+	AK292566 TSC_hg19_v1_chr18_+_77867161 AB020670	-45166	+	BC071589 NM_014913	-45420	+	AB044556 AB178535 AB178536 AB527962 TSC_hg19_v1_chr18_-_78005398 BC060797 NM_032510	93025	-	None	None	None	None	None	None	AK056304|LOC100130522|100130522|uncharacterized LOC100130522##AK292566|ADNP2|22850|ADNP homeobox 2##AB020670|ADNP2|22850|ADNP homeobox 2##BC071589|ADNP2|22850|ADNP homeobox 2##NM_014913|ADNP2|22850|ADNP homeobox 2##AB044556|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##AB178535|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##AB178536|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##BC060797|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##NM_032510|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	0.160747	
chr4	4147533	4147639	reg1017369.p1	7.275	+	BC044637 TSC_hg19_v1_chr4_-_3957162	-190431	-	J03853 NM_000683	-379291	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-379468	+	BC130430 BC130432 NM_177998	81031	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	102362	-	TSC_hg19_v1_chr4_-_4291782 AL136750 NM_001145725	144181	-	BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128##AL136750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_001145725|LYAR|55646|Ly1 antibody reactive homolog (mouse)	0.996917	CTCF.p2:0:0.997
chr10	13628813	13628933	reg1016319.p1	7.274	+	BC031618 AK097602 NM_001100912 NM_152751	-83914	-	TSC_hg19_v1_chr10_-_13390214 U34044 BC063816 GU954545 GU954546 GU954547 GU954548 GU954549 NM_001195602 NM_001195604 NM_012247	-238606	-	TSC_hg19_v1_chr10_-_13390036 AK301568 AK309829	-238834	-	NM_003675 TSC_hg19_v1_chr10_+_13628948	70	+	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	114	+	TSC_hg19_v1_chr10_-_13749648 AK057828	120816	-	BC031618|BEND7|222389|BEN domain containing 7##AK097602|BEND7|222389|BEN domain containing 7##NM_001100912|BEND7|222389|BEN domain containing 7##NM_152751|BEND7|222389|BEN domain containing 7##U34044|SEPHS1|22929|selenophosphate synthetase 1##BC063816|SEPHS1|22929|selenophosphate synthetase 1##GU954545|SEPHS1|22929|selenophosphate synthetase 1##GU954546|SEPHS1|22929|selenophosphate synthetase 1##GU954547|SEPHS1|22929|selenophosphate synthetase 1##GU954548|SEPHS1|22929|selenophosphate synthetase 1##GU954549|SEPHS1|22929|selenophosphate synthetase 1##NM_001195602|SEPHS1|22929|selenophosphate synthetase 1##NM_001195604|SEPHS1|22929|selenophosphate synthetase 1##NM_012247|SEPHS1|22929|selenophosphate synthetase 1##AK301568|SEPHS1|22929|selenophosphate synthetase 1##AK309829|SEPHS1|22929|selenophosphate synthetase 1##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK057828|FRMD4A|55691|FERM domain containing 4A	0.18512	
chr19	584514	584630	reg1020257.p1	7.274	+	TSC_hg19_v1_chr19_+_572595 X64364 AY358113 BC009040 AB085790 AK296858 AK297880 D28441 D45131 AB072923 L10240 AB091680 M87879 AB463434	-11910	+	TSC_hg19_v1_chr19_+_572571 AF548371	-12001	+	TSC_hg19_v1_chr19_+_572564 NM_001728 NM_198589 AK302231	-12087	+	TSC_hg19_v1_chr19_+_589888 AJ012582 NM_001194 AF065164 DQ854815 AB527443	5341	+	TSC_hg19_v1_chr19_-_633520 AK307525 BC030829	48926	-	TSC_hg19_v1_chr19_-_633538 AK225723 AK225865 BC098387 U75370	48971	-	X64364|BSG|682|basigin (Ok blood group)##AY358113|BSG|682|basigin (Ok blood group)##BC009040|BSG|682|basigin (Ok blood group)##AB085790|BSG|682|basigin (Ok blood group)##AK296858|BSG|682|basigin (Ok blood group)##AK297880|BSG|682|basigin (Ok blood group)##D28441|BSG|682|basigin (Ok blood group)##D45131|BSG|682|basigin (Ok blood group)##AB072923|BSG|682|basigin (Ok blood group)##L10240|BSG|682|basigin (Ok blood group)##AB091680|BSG|682|basigin (Ok blood group)##M87879|BSG|682|basigin (Ok blood group)##AF548371|BSG|682|basigin (Ok blood group)##NM_001728|BSG|682|basigin (Ok blood group)##NM_198589|BSG|682|basigin (Ok blood group)##AK302231|BSG|682|basigin (Ok blood group)##AJ012582|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##NM_001194|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##AF065164|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##DQ854815|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##AK307525|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC030829|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##AK225723|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##AK225865|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC098387|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##U75370|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)	0.959295	CTCF.p2:-12:0.907
chr2	152882226	152882386	reg1011261.p1	7.274	+	AY054985 AK290049 NM_001005747	-51840	-	TSC_hg19_v1_chr2_-_152684998 NM_001037174 NM_012097 NM_177985	-197310	-	TSC_hg19_v1_chr2_-_152684936 AF087889 AK298937	-197360	-	AK294398 AK316045 TSC_hg19_v1_chr2_-_152955250 NM_001005746	72924	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	73241	-	TSC_hg19_v1_chr2_-_152955813 AK291378	73505	-	AY054985|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK290049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005747|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001037174|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_012097|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_177985|ARL5A|26225|ADP-ribosylation factor-like 5A##AF087889|ARL5A|26225|ADP-ribosylation factor-like 5A##AK298937|ARL5A|26225|ADP-ribosylation factor-like 5A##AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK291378|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	0.251207	CTCF.p2:-28:0.251
chr13	103244411	103244528	reg1018275.p1	7.273	+	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	-190394	-	NM_004115 U66200	-675475	-	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	-1139474	+	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	4867	+	HQ258371 NM_001010977 BC132748 BC132750	102389	-	NM_001146197	166952	-	BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_004115|FGF14|2259|fibroblast growth factor 14##U66200|FGF14|2259|fibroblast growth factor 14##AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II##HQ258371|METTL21C|196541|methyltransferase like 21C##NM_001010977|METTL21C|196541|methyltransferase like 21C##BC132748|METTL21C|196541|methyltransferase like 21C##BC132750|METTL21C|196541|methyltransferase like 21C##NM_001146197|CCDC168|643677|coiled-coil domain containing 168	0.082639	
chr16	18769417	18769577	reg1018370.p1	7.273	+	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	-196106	-	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	-1204692	-	TSC_hg19_v1_chr16_+_16326508 AB463143	-2442967	+	TSC_hg19_v1_chr16_-_18798077 AK127316	28599	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	32158	-	AK301636 CU679669 TSC_hg19_v1_chr16_-_18812870 BC010281 D31885 NM_015161 AK291137 AK308092 BX648446 AK300825 AK300869 AK307315	43285	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a##AK301636|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BC010281|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##D31885|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##NM_015161|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK291137|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK308092|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BX648446|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK300825|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK300869|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK307315|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1	0.958463	CTCF.p2:15:0.958
chr16	24700591	24700688	reg1019597.p2	7.273	+	BC029649 TSC_hg19_v1_chr16_+_24567629	-133011	+	AF063596 BC101139 BC101140 BC101141 BC101142 BC114353 BC114354 BC118667 BC139830 BC029352 BC063524 AB112074 AB112075 BX648661 TSC_hg19_v1_chr16_+_24552052	-148775	+	TSC_hg19_v1_chr16_+_24550886 NM_006910 NM_018703 NM_032626	-149746	+	TSC_hg19_v1_chr16_+_24741000 NM_014494	40359	+	AY035864 TSC_hg19_v1_chr16_+_24788680	87985	+	TSC_hg19_v1_chr16_+_24802422 AL833757	101842	+	BC029649|RBBP6|5930|retinoblastoma binding protein 6##AF063596|RBBP6|5930|retinoblastoma binding protein 6##BC101139|RBBP6|5930|retinoblastoma binding protein 6##BC101140|RBBP6|5930|retinoblastoma binding protein 6##BC101141|RBBP6|5930|retinoblastoma binding protein 6##BC101142|RBBP6|5930|retinoblastoma binding protein 6##BC114353|RBBP6|5930|retinoblastoma binding protein 6##BC114354|RBBP6|5930|retinoblastoma binding protein 6##BC118667|RBBP6|5930|retinoblastoma binding protein 6##BC139830|RBBP6|5930|retinoblastoma binding protein 6##BC029352|RBBP6|5930|retinoblastoma binding protein 6##BC063524|RBBP6|5930|retinoblastoma binding protein 6##AB112074|RBBP6|5930|retinoblastoma binding protein 6##AB112075|RBBP6|5930|retinoblastoma binding protein 6##BX648661|RBBP6|5930|retinoblastoma binding protein 6##NM_006910|RBBP6|5930|retinoblastoma binding protein 6##NM_018703|RBBP6|5930|retinoblastoma binding protein 6##NM_032626|RBBP6|5930|retinoblastoma binding protein 6##NM_014494|TNRC6A|27327|trinucleotide repeat containing 6A##AY035864|TNRC6A|27327|trinucleotide repeat containing 6A##AL833757|TNRC6A|27327|trinucleotide repeat containing 6A	0.894319	CTCF.p2:0:0.894
chr17	38606580	38606700	reg1018127.p1	7.272	+	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-6821	+	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	-32516	-	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	-85694	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	51206	-	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	115078	-	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	197430	-	NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.993719	CTCF.p2:-7:0.994
chr18	61515527	61515632	reg1016922.p1	7.272	+	NM_003784 AF027866 AK300828 BC069417 BC069442 BC069547 AK290876 BC106743 BC106744	-72900	+	NM_001040147 D88575	-95288	+	AK292775 AK296705 AK309537 AK309970 NM_080475	-145386	+	AK313159 BC012609 NM_001143818 NM_002575 Y00630 J02685 J03603 M18082	39384	+	TSC_hg19_v1_chr18_+_61575223 AK314936	59635	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	67165	+	NM_003784|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AF027866|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK300828|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069417|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069442|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069547|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK290876|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106743|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106744|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##NM_001040147|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##D88575|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK313159|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##BC012609|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_001143818|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_002575|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##Y00630|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J02685|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J03603|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##M18082|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##AK314936|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	0.401486	CTCF.p2:-14:0.278
chr4	57291228	57291348	reg1018846.p2	7.272	+	AF516672 AY422212 BC142709 TSC_hg19_v1_chr4_-_57253644 AF161436 AK303733 BC141824 AK294332 AY314787 BC015096 NM_181806 AK316296 AK304309 BX648853	-37661	-	AK126014 NM_020722	-254928	+	AK023683 NM_025009 TSC_hg19_v1_chr4_+_56815093 BC136535 BC136536	-476197	+	AB590152 CU678610 DQ893484 DQ896410 TSC_hg19_v1_chr4_-_57301775 AK290942 BC004200 U00238 AK222759 D13757 AK312297 NM_002703	10468	-	TSC_hg19_v1_chr4_+_57301910 NM_006452 AK294821 BC010273	10631	+	NM_001079524 NM_001079525 TSC_hg19_v1_chr4_+_57302303 CR749824 BC019255	11017	+	AF516672|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AY422212|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC142709|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AF161436|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK303733|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC141824|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK294332|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AY314787|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC015096|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##NM_181806|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK316296|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK304309|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BX648853|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK126014|KIAA1211|57482|KIAA1211##NM_020722|KIAA1211|57482|KIAA1211##AK023683|CEP135|9662|centrosomal protein 135kDa##NM_025009|CEP135|9662|centrosomal protein 135kDa##BC136535|CEP135|9662|centrosomal protein 135kDa##BC136536|CEP135|9662|centrosomal protein 135kDa##DQ893484|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##DQ896410|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##AK290942|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##BC004200|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##U00238|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##AK222759|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##D13757|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##AK312297|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##NM_002703|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##NM_006452|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase##AK294821|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase##BC010273|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase##NM_001079524|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase##NM_001079525|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase##CR749824|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase##BC019255|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase	0.999267	CTCF.p2:0:0.999
chr6_apd_hap1	4373222	4373335	reg1019402.p1	7.272	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.928396	CTCF.p2:-9:0.928
chr7	118230300	118230398	reg1017451.p1	7.272	+	NM_019644 AK302407	-365615	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-406178	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-716806	-	AK307139 AB028967 NM_012281	1683355	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	2267671	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	2267811	-	NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12	0.992294	CTCF.p2:7:0.992
chr10	57260817	57260955	reg1021895.p1	7.271	+	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	-699888	-	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-2729460	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-3186771	+	NM_001190478 TSC_hg19_v1_chr10_+_57358800	97888	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	860128	-	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	860140	-	AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor	0.010588	
chr1	20088802	20088934	reg1022646.p1	7.271	+	L41147 NM_000871	-97089	+	AK309257 NM_001204086	-116609	+	AK313265 NM_001204085	-117003	+	TSC_hg19_v1_chr1_-_20126374 BX640987 NM_181719	37542	-	CR457228 BC051880 BC030960 AK000232 AK222991 NM_019062	52813	-	TSC_hg19_v1_chr1_+_20208887 NM_015207	119996	+	L41147|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##NM_000871|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4##NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4##CR457228|RNF186|54546|ring finger protein 186##BC051880|RNF186|54546|ring finger protein 186##BC030960|RNF186|54546|ring finger protein 186##AK000232|RNF186|54546|ring finger protein 186##AK222991|RNF186|54546|ring finger protein 186##NM_019062|RNF186|54546|ring finger protein 186##NM_015207|OTUD3|23252|OTU domain containing 3	0.999678	CTCF.p2:7:1.000
chr12	72964521	72964651	reg1021196.p1	7.271	+	TSC_hg19_v1_chr12_-_72667288 BC040230	-297316	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	-298082	+	AK095156 TSC_hg19_v1_chr12_-_72666355	-298243	-	NM_001136262 TSC_hg19_v1_chr12_+_74931614 AK056642	1966999	+	TSC_hg19_v1_chr12_+_74931622 BC009111 AL713650	1967053	+	AK054742 TSC_hg19_v1_chr12_+_74933681	1969034	+	BC040230|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AK095156|LOC283392|283392|uncharacterized LOC283392##NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B##AK056642|ATXN7L3B|552889|ataxin 7-like 3B##BC009111|ATXN7L3B|552889|ataxin 7-like 3B##AL713650|ATXN7L3B|552889|ataxin 7-like 3B	0.027005	
chr14	36432535	36432657	reg1020224.p1	7.271	+	TSC_hg19_v1_chr14_+_36295599 NM_032352 AY827074 BC006250 AK297106 AK310359 AK315424	-136993	+	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	-154201	-	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	-154449	-	AB463855 CU677729 BX248287 TSC_hg19_v1_chr14_-_36789806 AF208857 BC016821 AK293473 BC005197 AB038523 AK315290 NM_001144891 NM_016586	357248	-	TSC_hg19_v1_chr14_-_36982983 BC042093 NM_001101341	550386	-	NM_003317 U33749	556306	-	NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BX248287|MBIP|51562|MAP3K12 binding inhibitory protein 1##AF208857|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC016821|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK293473|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC005197|MBIP|51562|MAP3K12 binding inhibitory protein 1##AB038523|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK315290|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_001144891|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_016586|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC042093|SFTA3|253970|surfactant associated 3##NM_001101341|SFTA3|253970|surfactant associated 3##NM_003317|NKX2-1|7080|NK2 homeobox 1##U33749|NKX2-1|7080|NK2 homeobox 1	0.557742	CTCF.p2:-14:0.558
chr6	154477260	154477420	reg1020379.p1	7.271	+	EU360599 EU362990 NM_001145287	-69699	+	L29301 NM_000914 NM_001008503 NM_001008504 NM_001008505 NM_001145282 NM_001145283 NM_001145284 NM_001145285 NM_001145286 L25119 U12569 AB590577 AK309655 AK313901 AY225404 AY364230 AY036622 AY036623 AY309001 AY309005 AY309006 AY309007 AY309008 AY309009 BC074927 AY521028	-116780	+	DQ680044 NM_001145279 NM_001145280 EU340241 EU340242 EU340243 NM_001145281	-145708	+	BX647254 NM_001130699	173874	-	AK289917 AJ310566 NM_001130700 NM_015553 TSC_hg19_v1_chr6_-_154677938	200575	-	TSC_hg19_v1_chr6_-_154831690 BC060761	354331	-	EU360599|OPRM1|4988|opioid receptor, mu 1##EU362990|OPRM1|4988|opioid receptor, mu 1##NM_001145287|OPRM1|4988|opioid receptor, mu 1##L29301|OPRM1|4988|opioid receptor, mu 1##NM_000914|OPRM1|4988|opioid receptor, mu 1##NM_001008503|OPRM1|4988|opioid receptor, mu 1##NM_001008504|OPRM1|4988|opioid receptor, mu 1##NM_001008505|OPRM1|4988|opioid receptor, mu 1##NM_001145282|OPRM1|4988|opioid receptor, mu 1##NM_001145283|OPRM1|4988|opioid receptor, mu 1##NM_001145284|OPRM1|4988|opioid receptor, mu 1##NM_001145285|OPRM1|4988|opioid receptor, mu 1##NM_001145286|OPRM1|4988|opioid receptor, mu 1##L25119|OPRM1|4988|opioid receptor, mu 1##U12569|OPRM1|4988|opioid receptor, mu 1##AK313901|OPRM1|4988|opioid receptor, mu 1##AY225404|OPRM1|4988|opioid receptor, mu 1##AY364230|OPRM1|4988|opioid receptor, mu 1##AY036622|OPRM1|4988|opioid receptor, mu 1##AY036623|OPRM1|4988|opioid receptor, mu 1##AY309001|OPRM1|4988|opioid receptor, mu 1##AY309005|OPRM1|4988|opioid receptor, mu 1##AY309006|OPRM1|4988|opioid receptor, mu 1##AY309007|OPRM1|4988|opioid receptor, mu 1##AY309008|OPRM1|4988|opioid receptor, mu 1##AY309009|OPRM1|4988|opioid receptor, mu 1##BC074927|OPRM1|4988|opioid receptor, mu 1##AY521028|OPRM1|4988|opioid receptor, mu 1##DQ680044|OPRM1|4988|opioid receptor, mu 1##NM_001145279|OPRM1|4988|opioid receptor, mu 1##NM_001145280|OPRM1|4988|opioid receptor, mu 1##EU340241|OPRM1|4988|opioid receptor, mu 1##EU340242|OPRM1|4988|opioid receptor, mu 1##EU340243|OPRM1|4988|opioid receptor, mu 1##NM_001145281|OPRM1|4988|opioid receptor, mu 1##BX647254|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130699|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##AK289917|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##AJ310566|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130700|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_015553|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##BC060761|CNKSR3|154043|CNKSR family member 3	0.121756	
chrX	95627893	95628036	reg1021581.p1	7.271	+	NM_001171109 NM_001171110 NM_001171111 NM_173698	-2698953	+	AK090772 D50370 TSC_hg19_v1_chrX_-_92928576 BC034954 AK315176 AK223621 BC094729 AK095682 NM_004538	-2699341	-	AJ564931 NM_001168360 NM_001168361 NM_001168362 NM_001168363 AF206516 AF217288 AY861432 AY861433 AY861434 AY861435	-4537483	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	311787	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	311990	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	511006	+	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A##NM_001171110|FAM133A|286499|family with sequence similarity 133, member A##NM_001171111|FAM133A|286499|family with sequence similarity 133, member A##NM_173698|FAM133A|286499|family with sequence similarity 133, member A##AK090772|NAP1L3|4675|nucleosome assembly protein 1-like 3##D50370|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC034954|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK315176|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK223621|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC094729|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK095682|NAP1L3|4675|nucleosome assembly protein 1-like 3##NM_004538|NAP1L3|4675|nucleosome assembly protein 1-like 3##AJ564931|PCDH11X|27328|protocadherin 11 X-linked##NM_001168360|PCDH11X|27328|protocadherin 11 X-linked##NM_001168361|PCDH11X|27328|protocadherin 11 X-linked##NM_001168362|PCDH11X|27328|protocadherin 11 X-linked##NM_001168363|PCDH11X|27328|protocadherin 11 X-linked##AF206516|PCDH11X|27328|protocadherin 11 X-linked##AF217288|PCDH11X|27328|protocadherin 11 X-linked##AY861432|PCDH11X|27328|protocadherin 11 X-linked##AY861433|PCDH11X|27328|protocadherin 11 X-linked##AY861434|PCDH11X|27328|protocadherin 11 X-linked##AY861435|PCDH11X|27328|protocadherin 11 X-linked##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa	0.404791	CTCF.p2:-15:0.405
chr10	23276199	23276325	reg1017718.p1	7.270	+	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	-59281	+	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	-272772	-	AK294817 TSC_hg19_v1_chr10_-_23003038	-273225	-	BC117471 BC130380 NM_012228 BC018030 TSC_hg19_v1_chr10_+_23384507 AF151889 BC066305 AF122004 EU446941	108221	+	AB463998 NM_178161	205196	+	BC035732 NM_153714	357509	-	NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC117471|MSRB2|22921|methionine sulfoxide reductase B2##BC130380|MSRB2|22921|methionine sulfoxide reductase B2##NM_012228|MSRB2|22921|methionine sulfoxide reductase B2##BC018030|MSRB2|22921|methionine sulfoxide reductase B2##AF151889|MSRB2|22921|methionine sulfoxide reductase B2##BC066305|MSRB2|22921|methionine sulfoxide reductase B2##AF122004|MSRB2|22921|methionine sulfoxide reductase B2##EU446941|MSRB2|22921|methionine sulfoxide reductase B2##NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67	0.810336	CTCF.p2:17:0.810
chr5	9499176	9499282	reg1020735.p1	7.270	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-1629919	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-1629970	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-1630097	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	46965	-	BC095521 NM_019599	131233	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	750755	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.998372	CTCF.p2:0:0.998
chr7	110738830	110738937	reg1019108.p2	7.270	+	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-7760	+	NM_001024607	-2214247	-	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-2528509	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	463601	-	TSC_hg19_v1_chr7_-_111428948 AK294820	690128	-	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	1107382	-	NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK294820|DOCK4|9732|dedicator of cytokinesis 4##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4	0.0	
chrX	132139196	132139334	reg1019945.p1	7.270	+	AK056706 NM_001077188 NM_147175	-43843	-	AK075402 TSC_hg19_v1_chrX_-_132092281 BC094718	-47009	-	TSC_hg19_v1_chrX_-_132091486 BC037325 AK295118 AL049679 AB067777 AB067776 AK295041	-47864	-	BC101189 BC101190 BC101191 BC101192 BC069073 AF285593 NM_031907	23033	-	EU446842 BC074762 BC117336 BC126361 AB464736 AF219119 NM_016521	212975	-	AB528412 CU677845 DQ891809 DQ894992 AF064826 AY052833 AF030186 NM_001448 TSC_hg19_v1_chrX_-_132549316	409909	-	AK056706|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_001077188|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_147175|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC037325|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295118|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AL049679|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067777|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067776|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295041|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC101189|USP26|83844|ubiquitin specific peptidase 26##BC101190|USP26|83844|ubiquitin specific peptidase 26##BC101191|USP26|83844|ubiquitin specific peptidase 26##BC101192|USP26|83844|ubiquitin specific peptidase 26##BC069073|USP26|83844|ubiquitin specific peptidase 26##AF285593|USP26|83844|ubiquitin specific peptidase 26##NM_031907|USP26|83844|ubiquitin specific peptidase 26##EU446842|TFDP3|51270|transcription factor Dp family, member 3##BC074762|TFDP3|51270|transcription factor Dp family, member 3##BC117336|TFDP3|51270|transcription factor Dp family, member 3##BC126361|TFDP3|51270|transcription factor Dp family, member 3##AF219119|TFDP3|51270|transcription factor Dp family, member 3##NM_016521|TFDP3|51270|transcription factor Dp family, member 3##DQ891809|GPC4|2239|glypican 4##DQ894992|GPC4|2239|glypican 4##AF064826|GPC4|2239|glypican 4##AY052833|GPC4|2239|glypican 4##AF030186|GPC4|2239|glypican 4##NM_001448|GPC4|2239|glypican 4	0.99541	CTCF.p2:-15:0.995
chr1	197495985	197496163	reg1019271.p2	7.269	+	NM_001193640 NM_201253 AK299368 AK289733 AK307844 AB208923 AF154671 AY043324 AY043325 BC136271 BC143726 AJ748821	-258637	+	BC132818 BC136600 AK128549 AY163816 NM_194314	-326421	-	AF509326 AY099892 AY367065 AY971955 AY971956 AY971957 BC015396 TSC_hg19_v1_chr1_-_197115800 AK226178 AK125107 NM_001206846 NM_018136	-380380	-	AK000061 TSC_hg19_v1_chr1_-_197552357	56258	-	TSC_hg19_v1_chr1_-_197744376 BC022561	248260	-	TSC_hg19_v1_chr1_-_197744396 BC063456	248322	-	NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)##NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)##AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)##AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)##AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)##AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)##AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)##BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)##BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)##AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)##BC132818|ZBTB41|360023|zinc finger and BTB domain containing 41##BC136600|ZBTB41|360023|zinc finger and BTB domain containing 41##AK128549|ZBTB41|360023|zinc finger and BTB domain containing 41##AY163816|ZBTB41|360023|zinc finger and BTB domain containing 41##NM_194314|ZBTB41|360023|zinc finger and BTB domain containing 41##AF509326|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY099892|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY367065|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971955|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971956|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971957|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##BC015396|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK226178|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK125107|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_001206846|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_018136|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK000061|DENND1B|163486|DENN/MADD domain containing 1B##BC022561|DENND1B|163486|DENN/MADD domain containing 1B##BC063456|DENND1B|163486|DENN/MADD domain containing 1B	0.999558	CTCF.p2:19:1.000
chr18	3063083	3063218	reg1021947.p1	7.269	+	BC152448 D87436 NM_014646	-51206	-	AB026706 TSC_hg19_v1_chr18_+_2907037	-156149	+	TSC_hg19_v1_chr18_+_2847006 AF270513 NM_032048 BC032231 BC136541	-216119	+	BC116183 BC116184 TSC_hg19_v1_chr18_-_3219875	156710	-	TSC_hg19_v1_chr18_-_3219987 AJ621424 AK125322 NM_003803 NM_019856	156895	-	BC031972 NM_006471	184377	+	BC152448|LPIN2|9663|lipin 2##D87436|LPIN2|9663|lipin 2##NM_014646|LPIN2|9663|lipin 2##AB026706|EMILIN2|84034|elastin microfibril interfacer 2##AF270513|EMILIN2|84034|elastin microfibril interfacer 2##NM_032048|EMILIN2|84034|elastin microfibril interfacer 2##BC032231|EMILIN2|84034|elastin microfibril interfacer 2##BC136541|EMILIN2|84034|elastin microfibril interfacer 2##BC116183|MYOM1|8736|myomesin 1, 185kDa##BC116184|MYOM1|8736|myomesin 1, 185kDa##AJ621424|MYOM1|8736|myomesin 1, 185kDa##AK125322|MYOM1|8736|myomesin 1, 185kDa##NM_003803|MYOM1|8736|myomesin 1, 185kDa##NM_019856|MYOM1|8736|myomesin 1, 185kDa##BC031972|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric##NM_006471|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric	0.490401	CTCF.p2:5:0.490
chr2	127391977	127392087	reg1019889.p1	7.269	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2609168	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-4878795	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-4897567	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	21675	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	21760	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	472709	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.0	
chr6_mann_hap4	2711270	2711375	reg1017057.p1	7.269	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.99593	CTCF.p2:3:0.996
chr2	74759477	74759621	reg1021723.p1	7.268	+	TSC_hg19_v1_chr2_+_74757315 AF141307	-2264	+	TSC_hg19_v1_chr2_+_74757160 AF141306	-2364	+	TSC_hg19_v1_chr2_+_74757127 AB463757 DQ891822 DQ895009 EU176308	-2415	+	NM_001197260 AF035299	16600	+	AF311313 NM_032603 AF284815 AF282619 AK309474	21525	-	NM_001381	21962	+	AF141307|HTRA2|27429|HtrA serine peptidase 2##AF141306|HTRA2|27429|HtrA serine peptidase 2##DQ891822|HTRA2|27429|HtrA serine peptidase 2##DQ895009|HTRA2|27429|HtrA serine peptidase 2##EU176308|HTRA2|27429|HtrA serine peptidase 2##NM_001197260|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF035299|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF311313|LOXL3|84695|lysyl oxidase-like 3##NM_032603|LOXL3|84695|lysyl oxidase-like 3##AF284815|LOXL3|84695|lysyl oxidase-like 3##AF282619|LOXL3|84695|lysyl oxidase-like 3##AK309474|LOXL3|84695|lysyl oxidase-like 3##NM_001381|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)	0.84372	CTCF.p2:2:0.844
chr2	221030246	221030352	reg1019443.p1	7.267	+	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-537945	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-567710	+	M13981 NM_002191 BC039076 BC006391 TSC_hg19_v1_chr2_+_220437031 BT006954 CU675381 DQ890602 DQ893773 M13144	-593253	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	1406711	-	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	2128721	-	AK057009 NM_153038 BC109388	2132613	+	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##M13981|INHA|3623|inhibin, alpha##NM_002191|INHA|3623|inhibin, alpha##BC039076|INHA|3623|inhibin, alpha##BC006391|INHA|3623|inhibin, alpha##BT006954|INHA|3623|inhibin, alpha##DQ890602|INHA|3623|inhibin, alpha##DQ893773|INHA|3623|inhibin, alpha##M13144|INHA|3623|inhibin, alpha##BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140	0.03148	
chr14	94406422	94406556	reg1000096.p2	7.266	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	-12781	+	NM_001207071 NM_138344 AK093387 AX748092	-21241	+	AY225516 AY225517 NM_178013	-151724	-	AB056723 NM_016150	17277	-	AK303686 TSC_hg19_v1_chr14_-_94442905	36419	-	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	36587	-	NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2	0.49619	CTCF.p2:3:0.496
chrX	119115865	119115964	reg1002954.p2	7.266	+	CU677277 CU689374 BC032442 BC015354 BC016783 BC000940 BC012770 TSC_hg19_v1_chrX_-_119077709 BC018968 BC071686 AL832118 AK026279 AY388958 NM_024528	-38241	-	BC066357 NM_001008534 NM_001008535 NM_178813	-86047	+	TSC_hg19_v1_chrX_+_119005794 BC000266 U54993 X81900 AB451304 AB451435 CR456889	-110083	+	AB464156 DQ890992 DQ894169 BC021719 AK058125 AL590524 AF317219 AL590526 NM_001099685 NM_032498	95697	-	AB464155 EU446851 BC103857 BC103858 BC069324 BC069529 AY099086 NM_139282	133896	-	AL590526 NM_001099685 NM_032498 AF317219 AL590524 AK058125 BC021719 AB464156 DQ890992 DQ894169	176647	+	BC032442|NKAP|79576|NFKB activating protein##BC015354|NKAP|79576|NFKB activating protein##BC016783|NKAP|79576|NFKB activating protein##BC000940|NKAP|79576|NFKB activating protein##BC012770|NKAP|79576|NFKB activating protein##BC018968|NKAP|79576|NFKB activating protein##BC071686|NKAP|79576|NFKB activating protein##AL832118|NKAP|79576|NFKB activating protein##AK026279|NKAP|79576|NFKB activating protein##AY388958|NKAP|79576|NFKB activating protein##NM_024528|NKAP|79576|NFKB activating protein##BC066357|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_001008534|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_001008535|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_178813|AKAP14|158798|A kinase (PRKA) anchor protein 14##BC000266|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##U54993|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##X81900|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##AB451304|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##AB451435|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##CR456889|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##EU446851|RHOXF1|158800|Rhox homeobox family, member 1##BC103857|RHOXF1|158800|Rhox homeobox family, member 1##BC103858|RHOXF1|158800|Rhox homeobox family, member 1##BC069324|RHOXF1|158800|Rhox homeobox family, member 1##BC069529|RHOXF1|158800|Rhox homeobox family, member 1##AY099086|RHOXF1|158800|Rhox homeobox family, member 1##NM_139282|RHOXF1|158800|Rhox homeobox family, member 1##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2	0.971873	
chr1	146570071	146570194	reg1020339.p1	7.265	+	BC136292 NM_183372 AL832622	-487434	-	AF419617 NM_001101663	-501888	-	NM_001097616	-686265	+	AJ224538 HQ257946 TSC_hg19_v1_chr1_-_146643798	73633	-	AK316005 AK292820 AK304069 AK310982 BC053610 NM_005399 AK294863 AK316183	73960	-	AK295985 TSC_hg19_v1_chr1_+_146649617	79448	+	BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##AF419617|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_001101663|NBPF24|728912|neuroblastoma breakpoint family, member 24##NM_001097616|GPR89C|728932|G protein-coupled receptor 89C##AJ224538|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##HQ257946|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316005|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK292820|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK304069|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK310982|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##BC053610|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##NM_005399|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK294863|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316183|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	0.830069	CTCF.p2:15:0.830
chr1	16947638	16947766	reg1018479.p1	7.265	+	TSC_hg19_v1_chr1_-_16940046 AK123260 AY894575 NM_017940 BC066930 BC010124 BC082236 BC110431 AK055895 BC093404	-7806	-	BC028053 TSC_hg19_v1_chr1_-_16825680	-122051	-	TSC_hg19_v1_chr1_+_16767236 BC017014 AK001282 AB463921 AK024468 AM393342	-180457	+	TSC_hg19_v1_chr1_-_16971175 AK090414	23464	-	AK123337 TSC_hg19_v1_chr1_-_16971178	23475	-	TSC_hg19_v1_chr1_+_17248425 NM_014675	300732	+	AK123260|NBPF1|55672|neuroblastoma breakpoint family, member 1##AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_017940|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC066930|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC010124|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC110431|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK055895|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC093404|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC017014|NECAP2|55707|NECAP endocytosis associated 2##AK001282|NECAP2|55707|NECAP endocytosis associated 2##AK024468|NECAP2|55707|NECAP endocytosis associated 2##AM393342|NECAP2|55707|NECAP endocytosis associated 2##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK123337|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##NM_014675|CROCC|9696|ciliary rootlet coiled-coil, rootletin	0.948567	CTCF.p2:-3:0.949
chr7	25932700	25932880	reg1003843.p2	7.264	+	AB040290 AF330057 AF440392 NM_022150	-664710	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-712919	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-767850	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	259143	+	TSC_hg19_v1_chr7_-_26232151 BX538099	299361	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	307551	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.0	
chr19	33610103	33610218	reg1020328.p1	7.263	+	BC006108 NM_018025	-38375	+	AF423421 AJ347750 DQ892111 DQ895305 TSC_hg19_v1_chr19_-_33555795 AF268032 AK098246 AK300775 AK315105 BC036447 NM_033103	-54370	-	AK309396 NM_152266 AK128668 BC020247 BC010170 BC003535	-146990	+	BC031227 NM_173479 AB527326	12876	+	TSC_hg19_v1_chr19_+_33685155 AK129963	75008	+	AB009462 NM_002333 BC007408 TSC_hg19_v1_chr19_+_33685676 EU176387 AK296536	75443	+	BC006108|GPATCH1|55094|G patch domain containing 1##NM_018025|GPATCH1|55094|G patch domain containing 1##AF423421|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AJ347750|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ892111|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ895305|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AF268032|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK098246|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK300775|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK315105|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##BC036447|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##NM_033103|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##NM_152266|C19orf40|91442|chromosome 19 open reading frame 40##AK128668|C19orf40|91442|chromosome 19 open reading frame 40##BC020247|C19orf40|91442|chromosome 19 open reading frame 40##BC010170|C19orf40|91442|chromosome 19 open reading frame 40##BC003535|C19orf40|91442|chromosome 19 open reading frame 40##BC031227|WDR88|126248|WD repeat domain 88##NM_173479|WDR88|126248|WD repeat domain 88##AK129963|LRP3|4037|low density lipoprotein receptor-related protein 3##AB009462|LRP3|4037|low density lipoprotein receptor-related protein 3##NM_002333|LRP3|4037|low density lipoprotein receptor-related protein 3##BC007408|LRP3|4037|low density lipoprotein receptor-related protein 3##EU176387|LRP3|4037|low density lipoprotein receptor-related protein 3##AK296536|LRP3|4037|low density lipoprotein receptor-related protein 3	0.071466	
chr7	107515184	107515312	reg1019250.p2	7.263	+	L02785 BC025671 TSC_hg19_v1_chr7_-_107443671 BX640837 NM_000111	-71594	-	TSC_hg19_v1_chr7_+_107384589 AK026762 AK307992 BC130529 BC130531 BC144176	-130667	+	AK293352 NM_024814	-130970	+	AK294146 NM_000108 TSC_hg19_v1_chr7_+_107531614 AK312346 AK295080 AK225301	16352	+	J03490 TSC_hg19_v1_chr7_+_107531617 AK297508	16368	+	AK300077 TSC_hg19_v1_chr7_+_107531630 AK225289 AK310220 AB209703 BC018648 BC018696 J03620 AB529125 CU676276	16408	+	L02785|SLC26A3|1811|solute carrier family 26, member 3##BC025671|SLC26A3|1811|solute carrier family 26, member 3##BX640837|SLC26A3|1811|solute carrier family 26, member 3##NM_000111|SLC26A3|1811|solute carrier family 26, member 3##AK026762|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK307992|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC130529|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC130531|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC144176|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK293352|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##NM_024814|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK294146|DLD|1738|dihydrolipoamide dehydrogenase##NM_000108|DLD|1738|dihydrolipoamide dehydrogenase##AK312346|DLD|1738|dihydrolipoamide dehydrogenase##AK295080|DLD|1738|dihydrolipoamide dehydrogenase##AK225301|DLD|1738|dihydrolipoamide dehydrogenase##J03490|DLD|1738|dihydrolipoamide dehydrogenase##AK297508|DLD|1738|dihydrolipoamide dehydrogenase##AK300077|DLD|1738|dihydrolipoamide dehydrogenase##AK225289|DLD|1738|dihydrolipoamide dehydrogenase##AK310220|DLD|1738|dihydrolipoamide dehydrogenase##AB209703|DLD|1738|dihydrolipoamide dehydrogenase##BC018648|DLD|1738|dihydrolipoamide dehydrogenase##BC018696|DLD|1738|dihydrolipoamide dehydrogenase##J03620|DLD|1738|dihydrolipoamide dehydrogenase	0.925192	CTCF.p2:18:0.925
chr15	28331395	28331493	reg1018798.p2	7.262	+	NM_033223 BC029850 BC045709 S82769	-1114897	+	L08485 AK290453 TSC_hg19_v1_chr15_+_27112237 NM_001165037	-1219208	+	NM_000810	-1219579	+	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	12989	-	AF071172 BC015486 BC142951 BC045544 NM_004667	235827	-	TSC_hg19_v1_chr15_+_29033278 AK302529	701879	+	NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##L08485|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AK290453|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_001165037|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_000810|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene	0.574477	CTCF.p2:-1:0.574
chr3	188382719	188382876	reg1019860.p1	7.262	+	NM_001167671 BC130584 BC144076	-439563	+	NM_005578 U49957	-452077	+	TSC_hg19_v1_chr3_-_187871925 BC042414	-510927	-	TSC_hg19_v1_chr3_+_188664993 AK123232	282173	+	AK125682 NM_198485 BC101550 BC101552	507014	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	966462	+	NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma##U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC042414|LPP-AS2|339929|LPP antisense RNA 2 (non-protein coding)##AK123232|TPRG1|285386|tumor protein p63 regulated 1##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63	0.27727	
chr4	40230706	40230860	reg1017930.p2	7.262	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-32142	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-172251	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-251190	-	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	106662	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	285801	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	287175	-	NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47	0.633424	CTCF.p2:24:0.603
chr6	117510111	117510237	reg1023063.p1	7.262	+	BC039248 NM_173560	-311799	+	AF502962 NM_148963 AY435125 AY435126 AY435127	-359967	-	TSC_hg19_v1_chr6_-_117086883 BC038997 NM_001085480	-423313	-	AY056583 NM_153453 TSC_hg19_v1_chr6_+_117586720 AJ578053 NM_182645 BC100798 BC100799 BC118545 BC118622 BC069316 AK096878	76637	+	M34353 NM_002944 TSC_hg19_v1_chr6_-_117747031	236857	-	TSC_hg19_v1_chr6_+_117803805 BC035671 NM_173674 AK095973	293663	+	BC039248|RFX6|222546|regulatory factor X, 6##NM_173560|RFX6|222546|regulatory factor X, 6##AF502962|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##NM_148963|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435125|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435126|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435127|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##BC038997|FAM162B|221303|family with sequence similarity 162, member B##NM_001085480|FAM162B|221303|family with sequence similarity 162, member B##AY056583|VGLL2|245806|vestigial like 2 (Drosophila)##NM_153453|VGLL2|245806|vestigial like 2 (Drosophila)##AJ578053|VGLL2|245806|vestigial like 2 (Drosophila)##NM_182645|VGLL2|245806|vestigial like 2 (Drosophila)##BC100798|VGLL2|245806|vestigial like 2 (Drosophila)##BC100799|VGLL2|245806|vestigial like 2 (Drosophila)##BC118545|VGLL2|245806|vestigial like 2 (Drosophila)##BC118622|VGLL2|245806|vestigial like 2 (Drosophila)##BC069316|VGLL2|245806|vestigial like 2 (Drosophila)##AK096878|VGLL2|245806|vestigial like 2 (Drosophila)##M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##BC035671|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##NM_173674|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AK095973|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1	0.825807	CTCF.p2:2:0.826
chr7	41736156	41736297	reg1018797.p2	7.262	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1561617	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1561695	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	-1562095	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	6459	-	NM_000168	540391	-	TSC_hg19_v1_chr7_-_42276797 AK308429	540569	-	AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3	0.958476	CTCF.p2:-7:0.958
chr6	24521298	24521424	reg1019298.p1	7.261	+	TSC_hg19_v1_chr6_+_24495196 AK314357 BC034321 NM_001080 NM_170740 DQ891671 DQ894857 AJ427355 Y11192	-26166	+	TSC_hg19_v1_chr6_+_24495080 AK290800 AK294699 AK315380	-26283	+	L11702 CU676688 AY007546 BC093645 BC112001 L11701 AK310692 BC020748 NM_177483 AJ308108 NM_001503	-31568	-	AK310289 NM_001252328	62093	-	AK296310 AK295008 AK307503 AK296426 BC140821 BC144628 NM_001168375 NM_001168376 TSC_hg19_v1_chr6_-_24646374 AB002317 BC152460 NM_001168374 NM_001168377 NM_014809	124807	-	AJ420495 TSC_hg19_v1_chr6_-_24667106 AK296623 AB587417 AK002168 EU446614 BC110375 AF223469 AJ269473 AF201687 BC017553 NM_016614 AK308836	145609	-	AK314357|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##BC034321|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_001080|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_170740|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ891671|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ894857|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AJ427355|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##Y11192|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK290800|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK294699|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK315380|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##L11702|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AY007546|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC093645|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC112001|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##L11701|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310692|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC020748|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_177483|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AJ308108|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_001503|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310289|KIAA0319|9856|KIAA0319##NM_001252328|KIAA0319|9856|KIAA0319##AK296310|KIAA0319|9856|KIAA0319##AK295008|KIAA0319|9856|KIAA0319##AK307503|KIAA0319|9856|KIAA0319##AK296426|KIAA0319|9856|KIAA0319##BC140821|KIAA0319|9856|KIAA0319##BC144628|KIAA0319|9856|KIAA0319##NM_001168375|KIAA0319|9856|KIAA0319##NM_001168376|KIAA0319|9856|KIAA0319##AB002317|KIAA0319|9856|KIAA0319##BC152460|KIAA0319|9856|KIAA0319##NM_001168374|KIAA0319|9856|KIAA0319##NM_001168377|KIAA0319|9856|KIAA0319##NM_014809|KIAA0319|9856|KIAA0319##AJ420495|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK296623|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK002168|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##EU446614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC110375|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF223469|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AJ269473|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF201687|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC017553|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##NM_016614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK308836|TDP2|51567|tyrosyl-DNA phosphodiesterase 2	0.85938	CTCF.p2:12:0.859
chr11	105733628	105733749	reg1018441.p1	7.260	+	BC015199 NM_001112812 BC146816	-252258	+	NM_000829 NM_001077243 NM_001077244 TSC_hg19_v1_chr11_+_105480799 BC045546 BC142654 BC150209 BC035610	-252799	+	NM_021571	-723228	-	TSC_hg19_v1_chr11_-_105892952 AL834523 BC041118 AB058729 NM_032424	159271	-	AF136978 AF151057 AF151838 AF302110 NM_015423 TSC_hg19_v1_chr11_+_105948388 BC016728 AK312529 BC015470 AK293362 AB463408 CU677695 DQ891342 DQ894524	214677	+	NM_152433 NM_198439	214776	-	BC015199|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##NM_001112812|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##BC146816|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##NM_000829|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##NM_001077243|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##NM_001077244|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##BC045546|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##BC142654|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##BC150209|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##BC035610|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##NM_021571|CARD18|59082|caspase recruitment domain family, member 18##AL834523|KIAA1826|84437|KIAA1826##BC041118|KIAA1826|84437|KIAA1826##AB058729|KIAA1826|84437|KIAA1826##NM_032424|KIAA1826|84437|KIAA1826##AF136978|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151057|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151838|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF302110|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##NM_015423|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC016728|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK312529|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC015470|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK293362|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ891342|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ894524|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##NM_152433|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##NM_198439|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3	0.912541	CTCF.p2:12:0.913
chr1	198328317	198328446	reg1020822.p1	7.260	+	TSC_hg19_v1_chr1_+_198126162 NM_133494 AK313411	-202327	+	TSC_hg19_v1_chr1_+_197886502 AY273889 NM_020204	-441874	+	AJ296272 NM_001014434 AJ277915	-446742	+	NM_133262 NM_133326	181693	-	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	279792	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	279844	+	NM_133494|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##AK313411|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##AY273889|LHX9|56956|LIM homeobox 9##NM_020204|LHX9|56956|LIM homeobox 9##AJ296272|LHX9|56956|LIM homeobox 9##NM_001014434|LHX9|56956|LIM homeobox 9##AJ277915|LHX9|56956|LIM homeobox 9##NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	0.976289	CTCF.p2:-24:0.976
chr16	56903561	56903705	reg1018027.p1	7.260	+	AK315298 NM_000339 NM_001126107 NM_001126108 AK223133 X91220 U44128 AB463268	-4501	+	AK294176 NM_001242796	-86244	+	NM_001242795 AK056637 TSC_hg19_v1_chr16_+_56815740	-87898	+	NM_001010989 NM_001010990 NM_014685	62114	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	62508	+	M30185 AK297699 NM_000078 TSC_hg19_v1_chr16_+_56995861 AK291586 BC025739 EU176529 CU693046 BT020064 M83573	92204	+	AK315298|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_000339|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126107|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126108|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK223133|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##X91220|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##U44128|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK294176|NUP93|9688|nucleoporin 93kDa##NM_001242796|NUP93|9688|nucleoporin 93kDa##NM_001242795|NUP93|9688|nucleoporin 93kDa##AK056637|NUP93|9688|nucleoporin 93kDa##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##M30185|CETP|1071|cholesteryl ester transfer protein, plasma##AK297699|CETP|1071|cholesteryl ester transfer protein, plasma##NM_000078|CETP|1071|cholesteryl ester transfer protein, plasma##AK291586|CETP|1071|cholesteryl ester transfer protein, plasma##BC025739|CETP|1071|cholesteryl ester transfer protein, plasma##EU176529|CETP|1071|cholesteryl ester transfer protein, plasma##BT020064|CETP|1071|cholesteryl ester transfer protein, plasma##M83573|CETP|1071|cholesteryl ester transfer protein, plasma	0.871129	CTCF.p2:2:0.871
chr16	53580920	53581026	reg1019162.p2	7.259	+	TSC_hg19_v1_chr16_-_53537122 AK303503 BC001134 BC095401 AK222743 AK023320 NM_001012398 NM_022476	-43833	-	TSC_hg19_v1_chr16_+_53479685 BX537767	-101285	+	TSC_hg19_v1_chr16_+_53469560 AK300047	-111427	+	TSC_hg19_v1_chr16_-_53737760 BC136433 AK096333 AK308390 BC017977 CR749645 AK307929 EF565106 NM_001127897 NM_015272 AK304790	156784	-	NM_001080432	156901	+	TSC_hg19_v1_chr16_+_53738067 AK096554 AB051539 AK295196	157095	+	AK303503|AKTIP|64400|AKT interacting protein##BC001134|AKTIP|64400|AKT interacting protein##BC095401|AKTIP|64400|AKT interacting protein##AK222743|AKTIP|64400|AKT interacting protein##AK023320|AKTIP|64400|AKT interacting protein##NM_001012398|AKTIP|64400|AKT interacting protein##NM_022476|AKTIP|64400|AKT interacting protein##BX537767|RBL2|5934|retinoblastoma-like 2 (p130)##AK300047|RBL2|5934|retinoblastoma-like 2 (p130)##BC136433|RPGRIP1L|23322|RPGRIP1-like##AK096333|RPGRIP1L|23322|RPGRIP1-like##AK308390|RPGRIP1L|23322|RPGRIP1-like##BC017977|RPGRIP1L|23322|RPGRIP1-like##CR749645|RPGRIP1L|23322|RPGRIP1-like##AK307929|RPGRIP1L|23322|RPGRIP1-like##EF565106|RPGRIP1L|23322|RPGRIP1-like##NM_001127897|RPGRIP1L|23322|RPGRIP1-like##NM_015272|RPGRIP1L|23322|RPGRIP1-like##AK304790|RPGRIP1L|23322|RPGRIP1-like##NM_001080432|FTO|79068|fat mass and obesity associated##AK096554|FTO|79068|fat mass and obesity associated##AB051539|FTO|79068|fat mass and obesity associated##AK295196|FTO|79068|fat mass and obesity associated	0.444107	CTCF.p2:4:0.444
chr4	150920779	150920894	reg1021980.p1	7.259	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-1557252	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-1557497	-	TSC_hg19_v1_chr4_-_149357955 AB587357	-1562854	-	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	78689	+	NM_006439	582240	+	TSC_hg19_v1_chr4_-_151770612 AB208838	849813	-	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.803777	CTCF.p2:-20:0.804
chr6_mcf_hap5	4172958	4173063	reg1019568.p2	7.259	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999672	CTCF.p2:11:1.000
chr10	30648729	30648849	reg1012468.p1	7.258	+	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	-10556	-	TSC_hg19_v1_chr10_-_30348516 AK308850 NM_020848 BC071601	-300295	-	TSC_hg19_v1_chr10_-_30316350 BC047548	-332358	-	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	74150	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	74332	+	AF139543 BC066294 NM_183058	269846	-	AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##AK308850|KIAA1462|57608|KIAA1462##NM_020848|KIAA1462|57608|KIAA1462##BC071601|KIAA1462|57608|KIAA1462##BC047548|KIAA1462|57608|KIAA1462##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2	1.070955	CTCF.p2:-7:0.999
chr10	82423985	82424118	reg1020480.p1	7.258	+	AK123978 NM_001145719	-123477	+	AK123885 NM_207372	-126394	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-209947	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	1211031	+	DQ857894 NM_001165973	1213391	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3475206	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.997724	CTCF.p2:-24:0.998
chr11	448384	448492	reg1013750.p2	7.258	+	AK074088 TSC_hg19_v1_chr11_-_442005 AK316479 NM_001012302	-6435	-	BC144415 AK026923 TSC_hg19_v1_chr11_-_441974 AK303642 BC128557	-6467	-	BC025953 AK025099 AK172830 NM_001135053 NM_021805 AK093427	-31049	-	TSC_hg19_v1_chr11_+_450299 BC001210 NM_030783	1858	+	AK311723 TSC_hg19_v1_chr11_+_450363 AK307374 AL834357	1933	+	TSC_hg19_v1_chr11_+_450413 DQ891743 DQ894922 CU674608	2002	+	AK074088|ANO9|338440|anoctamin 9##AK316479|ANO9|338440|anoctamin 9##NM_001012302|ANO9|338440|anoctamin 9##BC144415|ANO9|338440|anoctamin 9##AK026923|ANO9|338440|anoctamin 9##AK303642|ANO9|338440|anoctamin 9##BC128557|ANO9|338440|anoctamin 9##BC025953|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK025099|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK172830|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_001135053|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_021805|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK093427|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##BC001210|PTDSS2|81490|phosphatidylserine synthase 2##NM_030783|PTDSS2|81490|phosphatidylserine synthase 2##AK311723|PTDSS2|81490|phosphatidylserine synthase 2##AL834357|PTDSS2|81490|phosphatidylserine synthase 2##DQ891743|PTDSS2|81490|phosphatidylserine synthase 2##DQ894922|PTDSS2|81490|phosphatidylserine synthase 2	0.98689	CTCF.p2:-6:0.987
chr12	76980708	76980832	reg1018840.p1	7.258	+	TSC_hg19_v1_chr12_-_76953586 AF323730 AF392452 NM_001003712 NM_020841	-27162	-	TSC_hg19_v1_chr12_-_76953526 BC082235	-27239	-	BC111728 TSC_hg19_v1_chr12_-_76953484	-27287	-	TSC_hg19_v1_chr12_+_77157882 NM_015336 BC030990	177092	+	TSC_hg19_v1_chr12_+_77157894 BC050324 AB023163	177134	+	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	177256	+	AF323730|OSBPL8|114882|oxysterol binding protein-like 8##AF392452|OSBPL8|114882|oxysterol binding protein-like 8##NM_001003712|OSBPL8|114882|oxysterol binding protein-like 8##NM_020841|OSBPL8|114882|oxysterol binding protein-like 8##BC082235|OSBPL8|114882|oxysterol binding protein-like 8##BC111728|OSBPL8|114882|oxysterol binding protein-like 8##NM_015336|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC030990|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC050324|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB023163|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17	0.993693	CTCF.p2:4:0.994
chr4	47004764	47004902	reg1021175.p1	7.258	+	AK090780 NM_000809	-8410	-	CU690038 DQ891679 DQ894864 EU176605 U30461 NM_001204266 NM_001204267 BC035055	-9337	-	BC107855 BC035923 AX721204 NM_130902	-93596	-	NM_000812 AK296023	28514	+	TSC_hg19_v1_chr4_-_47465683 AY542163 BC015145 NM_017845 AK000509 BC019826 AF182421	460846	-	TSC_hg19_v1_chr4_-_47465720 BC008371	460895	-	AK090780|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_000809|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##BC107855|COX7B2|170712|cytochrome c oxidase subunit VIIb2##BC035923|COX7B2|170712|cytochrome c oxidase subunit VIIb2##NM_130902|COX7B2|170712|cytochrome c oxidase subunit VIIb2##NM_000812|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1##AK296023|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1##AY542163|COMMD8|54951|COMM domain containing 8##BC015145|COMMD8|54951|COMM domain containing 8##NM_017845|COMMD8|54951|COMM domain containing 8##AK000509|COMMD8|54951|COMM domain containing 8##BC019826|COMMD8|54951|COMM domain containing 8##AF182421|COMMD8|54951|COMM domain containing 8##BC008371|COMMD8|54951|COMM domain containing 8	0.983939	CTCF.p2:-4:0.984
chr6	159638666	159638778	reg1016691.p1	7.258	+	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	-48292	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-172621	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-217501	-	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	475528	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	475640	-	TSC_hg19_v1_chr6_+_160148149 AK290854 AF374416 NM_004906 NM_152858 BC000383 BC004432 BC069192	509450	+	DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial##AK290854|WTAP|9589|Wilms tumor 1 associated protein##AF374416|WTAP|9589|Wilms tumor 1 associated protein##NM_004906|WTAP|9589|Wilms tumor 1 associated protein##NM_152858|WTAP|9589|Wilms tumor 1 associated protein##BC000383|WTAP|9589|Wilms tumor 1 associated protein##BC004432|WTAP|9589|Wilms tumor 1 associated protein##BC069192|WTAP|9589|Wilms tumor 1 associated protein	0.2956	CTCF.p2:-91:0.229
chr8	72566720	72566853	reg1021096.p1	7.258	+	BC035138 BC048982 TSC_hg19_v1_chr8_-_72459928	-106877	-	AJ000098 NM_000503 TSC_hg19_v1_chr8_-_72274481	-292311	-	TSC_hg19_v1_chr8_-_72274302 AK307379	-292493	-	TSC_hg19_v1_chr8_+_72756330 AK123315 BC094782	189488	+	TSC_hg19_v1_chr8_+_72756336 BX647470	189554	+	TSC_hg19_v1_chr8_-_72756449 AF087036 AB463900 BT007169	189653	-	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK123315|LOC100132891|100132891|uncharacterized LOC100132891##AF087036|MSC|9242|musculin##BT007169|MSC|9242|musculin	0.017568	
chrX	141694629	141694733	reg1020076.p2	7.258	+	AF151378 AF196482 AF116194 AK313591 BC013318 NM_016249	-401616	-	NM_005462 AF056334 BC025969	-703010	+	NM_177456	-712230	+	BC130503 BC130505 NM_001009613 HQ258561 DQ336126 DQ336127	419070	+	DQ336128 DQ336129 BC062750 NM_001009609	910581	-	AK315044 NM_001184750	1027637	-	AF151378|MAGEC2|51438|melanoma antigen family C, 2##AF196482|MAGEC2|51438|melanoma antigen family C, 2##AF116194|MAGEC2|51438|melanoma antigen family C, 2##AK313591|MAGEC2|51438|melanoma antigen family C, 2##BC013318|MAGEC2|51438|melanoma antigen family C, 2##NM_016249|MAGEC2|51438|melanoma antigen family C, 2##NM_005462|MAGEC1|9947|melanoma antigen family C, 1##AF056334|MAGEC1|9947|melanoma antigen family C, 1##BC025969|MAGEC1|9947|melanoma antigen family C, 1##NM_177456|MAGEC3|139081|melanoma antigen family C, 3##BC130503|SPANXN4|441525|SPANX family, member N4##BC130505|SPANXN4|441525|SPANX family, member N4##NM_001009613|SPANXN4|441525|SPANX family, member N4##HQ258561|SPANXN4|441525|SPANX family, member N4##DQ336126|SPANXN4|441525|SPANX family, member N4##DQ336127|SPANXN4|441525|SPANX family, member N4##DQ336128|SPANXN3|139067|SPANX family, member N3##DQ336129|SPANXN3|139067|SPANX family, member N3##BC062750|SPANXN3|139067|SPANX family, member N3##NM_001009609|SPANXN3|139067|SPANX family, member N3##AK315044|SLITRK4|139065|SLIT and NTRK-like family, member 4##NM_001184750|SLITRK4|139065|SLIT and NTRK-like family, member 4	0.830068	CTCF.p2:-6:0.830
chr12	1905424	1905605	reg1001086.p2	7.257	+	TSC_hg19_v1_chr12_+_1800235 AK128511 AK127111 BC051858 NM_024551	-105297	+	AK127196 TSC_hg19_v1_chr12_+_1800187	-105348	+	BC001749 NM_032642	-167103	+	BC048288 TSC_hg19_v1_chr12_-_1920907 AK301234	15410	-	NM_001039029 NM_001163925 NM_001163926	23918	+	TSC_hg19_v1_chr12_+_1929658 AK125402 AK095610 BC146894 BC146910 AK124687	24245	+	AK128511|ADIPOR2|79602|adiponectin receptor 2##BC051858|ADIPOR2|79602|adiponectin receptor 2##NM_024551|ADIPOR2|79602|adiponectin receptor 2##AK127196|ADIPOR2|79602|adiponectin receptor 2##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC048288|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##AK301234|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##NM_001039029|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##NM_001163925|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##NM_001163926|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK125402|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK095610|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##BC146894|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##BC146910|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK124687|LRTM2|654429|leucine-rich repeats and transmembrane domains 2	0.0	
chr10	3823727	3823863	reg1019839.p1	7.256	+	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-608790	-	CU678866 TSC_hg19_v1_chr10_-_3214975 AB384562 BC005025 AK225084 AK293788 AK315117 AK294865 AK299464 AK303406 BC095422 BX649017 AF061243	-608825	-	BC045577 TSC_hg19_v1_chr10_-_3214936	-608870	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	3516	-	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	3714	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1044623	+	BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC005025|PITRM1|10531|pitrilysin metallopeptidase 1##AK225084|PITRM1|10531|pitrilysin metallopeptidase 1##AK293788|PITRM1|10531|pitrilysin metallopeptidase 1##AK315117|PITRM1|10531|pitrilysin metallopeptidase 1##AK294865|PITRM1|10531|pitrilysin metallopeptidase 1##AK299464|PITRM1|10531|pitrilysin metallopeptidase 1##AK303406|PITRM1|10531|pitrilysin metallopeptidase 1##BC095422|PITRM1|10531|pitrilysin metallopeptidase 1##BX649017|PITRM1|10531|pitrilysin metallopeptidase 1##AF061243|PITRM1|10531|pitrilysin metallopeptidase 1##BC045577|PITRM1|10531|pitrilysin metallopeptidase 1##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2	0.032981	
chr16	3704395	3704492	reg1017317.p1	7.256	+	NM_005223	-1504	+	TSC_hg19_v1_chr16_-_3661587 NM_032444 AK122775	-42860	-	TSC_hg19_v1_chr16_-_3627397 AY601811 NM_178844 AK090431 AK090476	-77044	-	TSC_hg19_v1_chr16_-_3767521 U12595 BC001455 AF043254 AB528744 CU676340 DQ893476 DQ896346 BC000406 BC002994 AF154108 AK299127 BC018950 AK223049 AK223076 AK223205 BC023585 AK093344 NM_016292	63092	-	TSC_hg19_v1_chr16_-_3843474 AK304771	139083	-	AB210043 NM_001079846 NM_004380	225677	-	NM_005223|DNASE1|1773|deoxyribonuclease I##NM_032444|SLX4|84464|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)##AK122775|SLX4|84464|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)##AY601811|NLRC3|197358|NLR family, CARD domain containing 3##NM_178844|NLRC3|197358|NLR family, CARD domain containing 3##AK090431|NLRC3|197358|NLR family, CARD domain containing 3##AK090476|NLRC3|197358|NLR family, CARD domain containing 3##U12595|TRAP1|10131|TNF receptor-associated protein 1##BC001455|TRAP1|10131|TNF receptor-associated protein 1##AF043254|TRAP1|10131|TNF receptor-associated protein 1##DQ893476|TRAP1|10131|TNF receptor-associated protein 1##DQ896346|TRAP1|10131|TNF receptor-associated protein 1##BC000406|TRAP1|10131|TNF receptor-associated protein 1##BC002994|TRAP1|10131|TNF receptor-associated protein 1##AF154108|TRAP1|10131|TNF receptor-associated protein 1##AK299127|TRAP1|10131|TNF receptor-associated protein 1##BC018950|TRAP1|10131|TNF receptor-associated protein 1##AK223049|TRAP1|10131|TNF receptor-associated protein 1##AK223076|TRAP1|10131|TNF receptor-associated protein 1##AK223205|TRAP1|10131|TNF receptor-associated protein 1##BC023585|TRAP1|10131|TNF receptor-associated protein 1##AK093344|TRAP1|10131|TNF receptor-associated protein 1##NM_016292|TRAP1|10131|TNF receptor-associated protein 1##AK304771|CREBBP|1387|CREB binding protein##AB210043|CREBBP|1387|CREB binding protein##NM_001079846|CREBBP|1387|CREB binding protein##NM_004380|CREBBP|1387|CREB binding protein	1.005077	CTCF.p2:11:0.993
chr17	16208184	16208323	reg1022415.p1	7.256	+	TSC_hg19_v1_chr17_+_16120523 NM_004278 AK292932 AK302523 AK296120 BC068197 AB017165 CU686621	-87747	+	BC056862 BC035748 BC142648 BC026028 AK307614 TSC_hg19_v1_chr17_-_16118849 AF044209 BC050594 BC068996 BC058511 BC107772 NM_006311	-89413	-	AB385422 AB028970 BC167431 NM_001190438 NM_001190440 AF087856 AF303586	-110335	-	TSC_hg19_v1_chr17_-_16256747 AF514992 NM_181716 BC052604	48509	-	TSC_hg19_v1_chr17_-_16256824 BC137486 BC137487	48580	-	TSC_hg19_v1_chr17_+_16284371 BC000379 NM_018955	76111	+	NM_004278|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK292932|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK302523|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK296120|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##BC068197|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AB017165|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##BC056862|NCOR1|9611|nuclear receptor corepressor 1##BC035748|NCOR1|9611|nuclear receptor corepressor 1##BC142648|NCOR1|9611|nuclear receptor corepressor 1##BC026028|NCOR1|9611|nuclear receptor corepressor 1##AK307614|NCOR1|9611|nuclear receptor corepressor 1##AF044209|NCOR1|9611|nuclear receptor corepressor 1##BC050594|NCOR1|9611|nuclear receptor corepressor 1##BC068996|NCOR1|9611|nuclear receptor corepressor 1##BC058511|NCOR1|9611|nuclear receptor corepressor 1##BC107772|NCOR1|9611|nuclear receptor corepressor 1##NM_006311|NCOR1|9611|nuclear receptor corepressor 1##AB028970|NCOR1|9611|nuclear receptor corepressor 1##BC167431|NCOR1|9611|nuclear receptor corepressor 1##NM_001190438|NCOR1|9611|nuclear receptor corepressor 1##NM_001190440|NCOR1|9611|nuclear receptor corepressor 1##AF087856|NCOR1|9611|nuclear receptor corepressor 1##AF303586|NCOR1|9611|nuclear receptor corepressor 1##AF514992|CENPV|201161|centromere protein V##NM_181716|CENPV|201161|centromere protein V##BC052604|CENPV|201161|centromere protein V##BC137486|CENPV|201161|centromere protein V##BC137487|CENPV|201161|centromere protein V##BC000379|UBB|7314|ubiquitin B##NM_018955|UBB|7314|ubiquitin B	0.908226	CTCF.p2:15:0.908
chr3	89163856	89164000	reg1021422.p1	7.256	+	M83941 AF213460 BC026247 TSC_hg19_v1_chr3_+_89156840 AK291411 AB384708	-7078	+	AF213459 NM_005233 NM_182644 BC063282 TSC_hg19_v1_chr3_+_89156770	-7207	+	AL832398 NM_173824 TSC_hg19_v1_chr3_+_88199126 BC024188 AK297719 AK313547	-964900	+	AB590252 DQ892389 DQ895602 TSC_hg19_v1_chr3_-_93692741 Y00692 AK292994	4528748	-	TSC_hg19_v1_chr3_-_93692932 BC015801 NM_000313	4528990	-	TSC_hg19_v1_chr3_+_93698998 BC073842 NM_001174150 NM_001174151 NM_144996 NM_182896 CR936753 BC094725 BC104033 BC104034 BC104035 BC104036 AK299284 BC031093 AK296994 BC062993 BC015439 CR936763 AL713789 CR936756	4535099	+	M83941|EPHA3|2042|EPH receptor A3##AF213460|EPHA3|2042|EPH receptor A3##BC026247|EPHA3|2042|EPH receptor A3##AK291411|EPHA3|2042|EPH receptor A3##AF213459|EPHA3|2042|EPH receptor A3##NM_005233|EPHA3|2042|EPH receptor A3##NM_182644|EPHA3|2042|EPH receptor A3##BC063282|EPHA3|2042|EPH receptor A3##AL832398|C3orf38|285237|chromosome 3 open reading frame 38##NM_173824|C3orf38|285237|chromosome 3 open reading frame 38##BC024188|C3orf38|285237|chromosome 3 open reading frame 38##AK297719|C3orf38|285237|chromosome 3 open reading frame 38##AK313547|C3orf38|285237|chromosome 3 open reading frame 38##DQ892389|PROS1|5627|protein S (alpha)##DQ895602|PROS1|5627|protein S (alpha)##Y00692|PROS1|5627|protein S (alpha)##AK292994|PROS1|5627|protein S (alpha)##BC015801|PROS1|5627|protein S (alpha)##NM_000313|PROS1|5627|protein S (alpha)##BC073842|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174150|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174151|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_144996|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_182896|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936753|ARL13B|200894|ADP-ribosylation factor-like 13B##BC094725|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104033|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104034|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104035|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104036|ARL13B|200894|ADP-ribosylation factor-like 13B##AK299284|ARL13B|200894|ADP-ribosylation factor-like 13B##BC031093|ARL13B|200894|ADP-ribosylation factor-like 13B##AK296994|ARL13B|200894|ADP-ribosylation factor-like 13B##BC062993|ARL13B|200894|ADP-ribosylation factor-like 13B##BC015439|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936763|ARL13B|200894|ADP-ribosylation factor-like 13B##AL713789|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936756|ARL13B|200894|ADP-ribosylation factor-like 13B	0.029584	
chr5	130500887	130501025	reg1018968.p2	7.256	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	-25	-	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	-1260469	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-1704903	+	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	34	-	TSC_hg19_v1_chr5_-_130501019 NM_005340	87	-	AK000803 NM_181705 TSC_hg19_v1_chr5_+_130506648	5687	+	CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1##NM_005340|HINT1|3094|histidine triad nucleotide binding protein 1##AK000803|LYRM7|90624|Lyrm7 homolog (mouse)##NM_181705|LYRM7|90624|Lyrm7 homolog (mouse)	0.0	
chr12	110481080	110481222	reg1020007.p1	7.255	+	AK302535 BC032833 TSC_hg19_v1_chr12_+_110437393 CU691256 AY364251	-43708	+	TSC_hg19_v1_chr12_+_110437339 AF064604	-43818	+	TSC_hg19_v1_chr12_+_110437234 AK025261 BC057817 NM_033121	-43890	+	TSC_hg19_v1_chr12_-_110486328 AK021447 BC041968	5178	-	AK097461 NM_207435	24348	-	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	81070	+	AK302535|ANKRD13A|88455|ankyrin repeat domain 13A##BC032833|ANKRD13A|88455|ankyrin repeat domain 13A##AY364251|ANKRD13A|88455|ankyrin repeat domain 13A##AF064604|ANKRD13A|88455|ankyrin repeat domain 13A##AK025261|ANKRD13A|88455|ankyrin repeat domain 13A##BC057817|ANKRD13A|88455|ankyrin repeat domain 13A##NM_033121|ANKRD13A|88455|ankyrin repeat domain 13A##AK021447|C12orf76|400073|chromosome 12 open reading frame 76##BC041968|C12orf76|400073|chromosome 12 open reading frame 76##AK097461|C12orf76|400073|chromosome 12 open reading frame 76##NM_207435|C12orf76|400073|chromosome 12 open reading frame 76##NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	0.944603	CTCF.p2:-13:0.945
chr14	88362860	88362993	reg1021721.p1	7.255	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-2363341	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-2366385	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-2366453	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	96537	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	96633	-	NM_001201402	97082	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	0.999718	CTCF.p2:10:1.000
chr2	182295293	182295409	reg1019405.p1	7.255	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-449524	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-449708	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-449981	+	NM_000885	26267	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	26699	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	26971	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.0	
chr2	46067704	46067792	reg1016685.p1	7.255	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-188674	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-229341	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-272620	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	456843	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	457227	+	NM_001145051	638955	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.010005	
chr1	45769733	45769904	reg1018744.p2	7.254	+	TSC_hg19_v1_chr1_+_45769564 BC035497	-243	+	TSC_hg19_v1_chr1_-_45672278 AB040944 NM_020883	-97567	-	TSC_hg19_v1_chr1_+_45478442 AK293702	-291367	+	NM_032756 BC007293	22742	+	AY169960 NM_025077 TSC_hg19_v1_chr1_+_45805393	35567	+	TSC_hg19_v1_chr1_+_45805740 AK293704	35902	+	BC035497|LOC400752|400752|uncharacterized LOC400752##AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5##NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5##AK293702|UROD|7389|uroporphyrinogen decarboxylase##NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##AY169960|TOE1|114034|target of EGR1, member 1 (nuclear)##NM_025077|TOE1|114034|target of EGR1, member 1 (nuclear)##AK293704|TOE1|114034|target of EGR1, member 1 (nuclear)	0.54583	CTCF.p2:-17:0.546
chr15	82732398	82732506	reg1016038.p1	7.254	+	NM_198181 CR936812	-10236	+	TSC_hg19_v1_chr15_+_82647308 BC066934	-85121	+	NM_001164465	-90747	-	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	92441	-	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	212340	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	212438	+	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like	0.919617	CTCF.p2:-6:0.920
chr5	91605350	91605450	reg1017894.p1	7.254	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-926268	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-929238	+	AK091866 TSC_hg19_v1_chr5_-_90610220	-995155	-	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	1311563	-	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	1313583	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	1315268	+	BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	0.828927	CTCF.p2:1:0.829
chr9	134505725	134505854	reg1017471.p1	7.254	+	AK057848 TSC_hg19_v1_chr9_-_134406625 BC091495 BC015547 AK022317 NM_001135954 NM_031432	-99139	-	TSC_hg19_v1_chr9_-_134406578 AF254133 CR457281 CU677347 AF237290 AF125106 AK295471 AK307475	-99242	-	AK315218 TSC_hg19_v1_chr9_+_134378402 AK293529 BC022877	-127354	+	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	79413	-	D21239 NM_005312	107135	-	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	109501	-	AK057848|UCK1|83549|uridine-cytidine kinase 1##BC091495|UCK1|83549|uridine-cytidine kinase 1##BC015547|UCK1|83549|uridine-cytidine kinase 1##AK022317|UCK1|83549|uridine-cytidine kinase 1##NM_001135954|UCK1|83549|uridine-cytidine kinase 1##NM_031432|UCK1|83549|uridine-cytidine kinase 1##AF254133|UCK1|83549|uridine-cytidine kinase 1##CR457281|UCK1|83549|uridine-cytidine kinase 1##AF237290|UCK1|83549|uridine-cytidine kinase 1##AF125106|UCK1|83549|uridine-cytidine kinase 1##AK295471|UCK1|83549|uridine-cytidine kinase 1##AK307475|UCK1|83549|uridine-cytidine kinase 1##AK315218|POMT1|10585|protein-O-mannosyltransferase 1##AK293529|POMT1|10585|protein-O-mannosyltransferase 1##BC022877|POMT1|10585|protein-O-mannosyltransferase 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1	0.830235	CTCF.p2:-19:0.830
chr9	27276538	27276687	reg1021349.p1	7.254	+	AK294887 NM_000459	-167470	+	BC126156 BC136298 AK222987 AK024955 BC056252 NM_022901	-270943	-	TSC_hg19_v1_chr9_+_26956416 NM_001099224 NM_025103 AK023707 AK225570 BC023634 AY040325 BC107742	-320201	+	BC137351 BC137352 BC144602 BC014307 AJ278482 NM_001161585 NM_020641	20509	-	AF146759 AF315688 NM_020124 AY358855 AB463795	247710	+	TSC_hg19_v1_chr9_-_27529809 AL832572 BC033027 AK023266 NM_024761	253038	-	AK294887|TEK|7010|TEK tyrosine kinase, endothelial##NM_000459|TEK|7010|TEK tyrosine kinase, endothelial##BC126156|LRRC19|64922|leucine rich repeat containing 19##BC136298|LRRC19|64922|leucine rich repeat containing 19##AK222987|LRRC19|64922|leucine rich repeat containing 19##AK024955|LRRC19|64922|leucine rich repeat containing 19##BC056252|LRRC19|64922|leucine rich repeat containing 19##NM_022901|LRRC19|64922|leucine rich repeat containing 19##NM_001099224|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##NM_025103|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AK023707|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AK225570|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##BC023634|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AY040325|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##BC107742|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##BC137351|C9orf11|54586|chromosome 9 open reading frame 11##BC137352|C9orf11|54586|chromosome 9 open reading frame 11##BC144602|C9orf11|54586|chromosome 9 open reading frame 11##BC014307|C9orf11|54586|chromosome 9 open reading frame 11##AJ278482|C9orf11|54586|chromosome 9 open reading frame 11##NM_001161585|C9orf11|54586|chromosome 9 open reading frame 11##NM_020641|C9orf11|54586|chromosome 9 open reading frame 11##AF146759|IFNK|56832|interferon, kappa##AF315688|IFNK|56832|interferon, kappa##NM_020124|IFNK|56832|interferon, kappa##AY358855|IFNK|56832|interferon, kappa##AL832572|MOB3B|79817|MOB kinase activator 3B##BC033027|MOB3B|79817|MOB kinase activator 3B##AK023266|MOB3B|79817|MOB kinase activator 3B##NM_024761|MOB3B|79817|MOB kinase activator 3B	0.999403	CTCF.p2:15:0.999
chr1	201404944	201405078	reg1019247.p1	7.253	+	AJ315823 BC012601 TSC_hg19_v1_chr1_-_201390859 AK223588 J04760 AK311896 AL831820 AL831975 BC012600 BX510903 NM_003281	-14152	-	TSC_hg19_v1_chr1_-_201368726 BC071890	-36270	-	BX647307 U42408 TSC_hg19_v1_chr1_-_201368661 BC009742 NM_005558	-36366	-	BC014390 TSC_hg19_v1_chr1_-_201438317 AF151100 AK075179 AK222644 BC068273 NM_012396	33254	-	AK293053 NM_001193572	60689	-	AK290133 NM_001193571	70955	-	AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)##AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)##J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)##AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)##AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)##AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)##BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)##NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC071890|LAD1|3898|ladinin 1##BX647307|LAD1|3898|ladinin 1##U42408|LAD1|3898|ladinin 1##BC009742|LAD1|3898|ladinin 1##NM_005558|LAD1|3898|ladinin 1##BC014390|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AF151100|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK075179|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK222644|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##BC068273|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##NM_012396|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK293053|CSRP1|1465|cysteine and glycine-rich protein 1##NM_001193572|CSRP1|1465|cysteine and glycine-rich protein 1##AK290133|CSRP1|1465|cysteine and glycine-rich protein 1##NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1	0.892745	CTCF.p2:-19:0.893
chr16	86021213	86021330	reg1019988.p2	7.253	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-88485	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-187936	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-187966	+	TSC_hg19_v1_chr16_-_86542463 AK091834	521193	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	522885	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	522969	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	1.083008	CTCF.p2:66:0.999
chr20	33917481	33917583	reg1019769.p1	7.253	+	BC113483 AK091116 AX746786 NM_178468	-37319	-	TSC_hg19_v1_chr20_-_33872580 BC001119 AF047433 NM_002212 NM_181466 AK314969	-44936	-	NM_181468 TSC_hg19_v1_chr20_-_33872566 AB062289 BC019305 Y11435 AK296076 BC095465 BC011845	-44995	-	BC008871 AB528278 AM392884 AM393853 TSC_hg19_v1_chr20_-_33999777 AK001712 AK022650 AK022742 AK225557 AK293516 AK300130 AK302133 AK308819 BC105791	82237	-	TSC_hg19_v1_chr20_-_33999791 AK225281 AK293149 BC119013 BC122862 AY050659 NM_001184977 NM_018244 NM_199487	82330	-	AB593125 U13660 NM_000557	108458	-	BC113483|FAM83C|128876|family with sequence similarity 83, member C##AK091116|FAM83C|128876|family with sequence similarity 83, member C##NM_178468|FAM83C|128876|family with sequence similarity 83, member C##BC001119|EIF6|3692|eukaryotic translation initiation factor 6##AF047433|EIF6|3692|eukaryotic translation initiation factor 6##NM_002212|EIF6|3692|eukaryotic translation initiation factor 6##NM_181466|EIF6|3692|eukaryotic translation initiation factor 6##AK314969|EIF6|3692|eukaryotic translation initiation factor 6##NM_181468|EIF6|3692|eukaryotic translation initiation factor 6##AB062289|EIF6|3692|eukaryotic translation initiation factor 6##BC019305|EIF6|3692|eukaryotic translation initiation factor 6##Y11435|EIF6|3692|eukaryotic translation initiation factor 6##AK296076|EIF6|3692|eukaryotic translation initiation factor 6##BC095465|EIF6|3692|eukaryotic translation initiation factor 6##BC011845|EIF6|3692|eukaryotic translation initiation factor 6##BC008871|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AM392884|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AM393853|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK001712|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK022650|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK022742|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK225557|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293516|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK300130|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK302133|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK308819|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC105791|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK225281|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293149|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC119013|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC122862|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AY050659|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_001184977|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_018244|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_199487|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AB593125|GDF5|8200|growth differentiation factor 5##U13660|GDF5|8200|growth differentiation factor 5##NM_000557|GDF5|8200|growth differentiation factor 5	0.999565	CTCF.p2:4:1.000
chrX	118201137	118201254	reg1018895.p2	7.253	+	TSC_hg19_v1_chrX_+_118109314 AK026265	-91857	+	TSC_hg19_v1_chrX_+_118108607 BC098283 BC099847 BC100671 BC103491 NM_001031855 NM_024778	-92542	+	TSC_hg19_v1_chrX_+_118108580 AK091777 AK290198 AX747177	-92615	+	NM_020721	83346	-	TSC_hg19_v1_chrX_+_118370247 NM_006667 AK313956 Y12711 BC034238 AK293618 DQ891774 DQ894958 CR456993	169070	+	NM_145305 TSC_hg19_v1_chrX_+_118533308 AK094254 BC071871	332092	+	AK026265|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC098283|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC099847|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC100671|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC103491|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_001031855|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_024778|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK091777|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK290198|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_020721|KIAA1210|57481|KIAA1210##NM_006667|PGRMC1|10857|progesterone receptor membrane component 1##AK313956|PGRMC1|10857|progesterone receptor membrane component 1##Y12711|PGRMC1|10857|progesterone receptor membrane component 1##BC034238|PGRMC1|10857|progesterone receptor membrane component 1##AK293618|PGRMC1|10857|progesterone receptor membrane component 1##DQ891774|PGRMC1|10857|progesterone receptor membrane component 1##DQ894958|PGRMC1|10857|progesterone receptor membrane component 1##CR456993|PGRMC1|10857|progesterone receptor membrane component 1##NM_145305|SLC25A43|203427|solute carrier family 25, member 43##AK094254|SLC25A43|203427|solute carrier family 25, member 43##BC071871|SLC25A43|203427|solute carrier family 25, member 43	0.0	
chr10	116889635	116889782	reg1020259.p1	7.252	+	TSC_hg19_v1_chr10_+_116853123 BC029592 BC035157 NM_207303 BC139916 BC139923 BC047716	-36560	+	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	-191745	+	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	-308159	+	AB590245 DQ892210 DQ895406 AF042080 U95847 U97144 BC014962 NM_145793	1141972	-	AK292886 NM_001145453	1143048	-	AF038421 NM_005264 TSC_hg19_v1_chr10_-_118033147	1143360	-	BC029592|ATRNL1|26033|attractin-like 1##BC035157|ATRNL1|26033|attractin-like 1##NM_207303|ATRNL1|26033|attractin-like 1##BC139916|ATRNL1|26033|attractin-like 1##BC139923|ATRNL1|26033|attractin-like 1##BC047716|ATRNL1|26033|attractin-like 1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##DQ892210|GFRA1|2674|GDNF family receptor alpha 1##DQ895406|GFRA1|2674|GDNF family receptor alpha 1##AF042080|GFRA1|2674|GDNF family receptor alpha 1##U95847|GFRA1|2674|GDNF family receptor alpha 1##U97144|GFRA1|2674|GDNF family receptor alpha 1##BC014962|GFRA1|2674|GDNF family receptor alpha 1##NM_145793|GFRA1|2674|GDNF family receptor alpha 1##AK292886|GFRA1|2674|GDNF family receptor alpha 1##NM_001145453|GFRA1|2674|GDNF family receptor alpha 1##AF038421|GFRA1|2674|GDNF family receptor alpha 1##NM_005264|GFRA1|2674|GDNF family receptor alpha 1	0.941441	CTCF.p2:26:0.941
chr10	30960083	30960215	reg1018589.p1	7.251	+	AF139543 BC066294 NM_183058	-41514	-	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-237028	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-237210	+	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	328303	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	360672	-	TSC_hg19_v1_chr10_+_31607451 BX647794	647287	+	AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1	0.11975	
chr4	160408476	160408596	reg1019598.p1	7.251	+	AK294459 NM_014247	-219539	+	AK058100 NM_152543	-452204	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-718251	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	2676615	-	TSC_hg19_v1_chr4_-_164088002 AK097352	3679456	-	TSC_hg19_v1_chr4_-_164088043 AK308601	3679501	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.98886	CTCF.p2:6:0.989
chr9	13034317	13034434	reg1018635.p2	7.251	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	-258594	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	-259359	+	NM_000550 X51420 BC052608	-340950	+	AB384682 AF093419 BC140793 BC144564 NM_003829	215963	-	AB210041 TSC_hg19_v1_chr9_-_13279602	245207	-	BX537698 TSC_hg19_v1_chr9_-_14087002	1052577	-	HQ257895|C9orf150|286343|chromosome 9 open reading frame 150##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##AF093419|MPDZ|8777|multiple PDZ domain protein##BC140793|MPDZ|8777|multiple PDZ domain protein##BC144564|MPDZ|8777|multiple PDZ domain protein##NM_003829|MPDZ|8777|multiple PDZ domain protein##AB210041|MPDZ|8777|multiple PDZ domain protein##BX537698|NFIB|4781|nuclear factor I/B	0.068237	
chr1	27718848	27718975	reg1018418.p1	7.250	+	BC137466 AY358761 NM_207397	-9119	-	AY358081 CR456808 DQ892028 DQ895220 AK309540 AK075140 AK309576 BC020731 NM_003665 NM_173452 AY358283	-17596	-	NM_004672 TSC_hg19_v1_chr1_-_27693415	-25534	-	BC032702 NM_005281 TSC_hg19_v1_chr1_+_27719158 AK291185 AK314868	255	+	BC001524 BC001855 AK024540 TSC_hg19_v1_chr1_-_27732180 AY007122	13273	-	TSC_hg19_v1_chr1_-_27816621 AK303011 BC032724 BC050093 BC040943	97689	-	BC137466|CD164L2|388611|CD164 sialomucin-like 2##AY358761|CD164L2|388611|CD164 sialomucin-like 2##NM_207397|CD164L2|388611|CD164 sialomucin-like 2##AY358081|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##CR456808|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##DQ892028|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##DQ895220|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AK309540|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AK075140|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##BC020731|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_003665|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_173452|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AY358283|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_004672|MAP3K6|9064|mitogen-activated protein kinase kinase kinase 6##BC032702|GPR3|2827|G protein-coupled receptor 3##NM_005281|GPR3|2827|G protein-coupled receptor 3##AK291185|GPR3|2827|G protein-coupled receptor 3##AK314868|GPR3|2827|G protein-coupled receptor 3##BC001524|WASF2|10163|WAS protein family, member 2##BC001855|WASF2|10163|WAS protein family, member 2##AK024540|WASF2|10163|WAS protein family, member 2##AY007122|WASF2|10163|WAS protein family, member 2##AK303011|WASF2|10163|WAS protein family, member 2##BC032724|WASF2|10163|WAS protein family, member 2##BC040943|WASF2|10163|WAS protein family, member 2	0.930439	CTCF.p2:13:0.930
chr18	3481943	3482079	reg1018500.p2	7.250	+	NM_173211	-28240	+	TSC_hg19_v1_chr18_+_3451599 NM_170695 NM_173210 AK307230 BC031268	-30380	+	NM_173209 NM_173208 TSC_hg19_v1_chr18_+_3450174 NM_003244 AK309471 X89750	-31931	+	TSC_hg19_v1_chr18_+_3594077 AK093095 AX747919 BC137437	112131	+	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	363319	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	392273	-	NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1##NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1##BC031268|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1##NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1##AK309471|TGIF1|7050|TGFB-induced factor homeobox 1##X89750|TGIF1|7050|TGFB-induced factor homeobox 1##AK093095|FLJ35776|649446|uncharacterized LOC649446##BC137437|FLJ35776|649446|uncharacterized LOC649446##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	0.0	
chr18	46305166	46305286	reg1003596.p5	7.250	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-239453	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-369517	-	AM988836 AK296709 NM_001039360 EF120357	-641527	-	AK131394 NM_001190823	163921	-	AK301535 NM_001190822	170476	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	171541	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.256675	CTCF.p2:2:0.257
chrX	103440295	103440419	reg1019514.p1	7.250	+	TSC_hg19_v1_chrX_+_103411251 BC017665	-29090	+	TSC_hg19_v1_chrX_+_103411133 AK091221 AX746858 BC057847 NM_207318	-29233	+	TSC_hg19_v1_chrX_-_103401691 AL833609 NM_001012755	-38700	-	BC042633 AY114148 BC053599 NM_153448 AK097704	59229	-	AK290196 TSC_hg19_v1_chrX_+_103810879	370522	+	TSC_hg19_v1_chrX_+_103810991 AJ272208 NM_017416	370635	+	BC017665|FAM199X|139231|family with sequence similarity 199, X-linked##AK091221|FAM199X|139231|family with sequence similarity 199, X-linked##BC057847|FAM199X|139231|family with sequence similarity 199, X-linked##NM_207318|FAM199X|139231|family with sequence similarity 199, X-linked##AL833609|MCART6|401612|mitochondrial carrier triple repeat 6##NM_001012755|MCART6|401612|mitochondrial carrier triple repeat 6##BC042633|ESX1|80712|ESX homeobox 1##AY114148|ESX1|80712|ESX homeobox 1##BC053599|ESX1|80712|ESX homeobox 1##NM_153448|ESX1|80712|ESX homeobox 1##AK097704|ESX1|80712|ESX homeobox 1##AK290196|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##AJ272208|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##NM_017416|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2	0.969705	CTCF.p2:3:0.970
chr3	33106593	33106711	reg1013177.p2	7.249	+	BC071751 NM_005508 AK292674	-113552	+	DQ232881 NM_001039111	-247143	+	TSC_hg19_v1_chr3_+_32726700 AK023227 AK022952 NM_015442 AK309670 BC006382 BC002931 BC002928 AK297085 AK298693 CU678296 CU678298 DQ892895 DQ896143 EU831494 EU831581	-379847	+	TSC_hg19_v1_chr3_-_33138279 AK300021 AK126979 AK128242 NM_001039770 NM_001136238	31618	-	NM_001079811 TSC_hg19_v1_chr3_-_33138315	31681	-	BT007147 CU675671 DQ890689 DQ893871 TSC_hg19_v1_chr3_-_33138590	31931	-	BC071751|CCR4|1233|chemokine (C-C motif) receptor 4##NM_005508|CCR4|1233|chemokine (C-C motif) receptor 4##AK292674|CCR4|1233|chemokine (C-C motif) receptor 4##DQ232881|TRIM71|131405|tripartite motif containing 71##NM_001039111|TRIM71|131405|tripartite motif containing 71##AK023227|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK022952|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##NM_015442|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK309670|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC006382|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002931|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002928|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK297085|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK298693|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ892895|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ896143|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831494|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831581|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK300021|GLB1|2720|galactosidase, beta 1##AK126979|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##AK128242|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001039770|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001136238|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001079811|GLB1|2720|galactosidase, beta 1##BT007147|GLB1|2720|galactosidase, beta 1##DQ890689|GLB1|2720|galactosidase, beta 1##DQ893871|GLB1|2720|galactosidase, beta 1	0.998616	CTCF.p2:0:0.999
chrX	130881326	130881445	reg1015364.p2	7.249	+	BC137050 AB529233 NM_001004486	-203387	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-457973	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-458123	-	TSC_hg19_v1_chrX_-_130964633 AK097911	83266	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	275936	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	276255	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.010506	
chr19	28457399	28457526	reg1021271.p1	7.248	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-172534	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-172629	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-173074	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	1246598	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	1246659	-	NM_001146339	1560028	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.934608	CTCF.p2:-7:0.935
chr22	24236248	24236395	reg1021108.p1	7.248	+	NM_001024939 TSC_hg19_v1_chr22_+_24200061 AK304409 AK308589 AK316049 CR456373 AB463269 CU013078 CU013366	-36208	+	AF443201 AJ271290 NM_001024938 NM_030807 AK314502 AK315937 AK075467 AK296169 AK308602 BC063525 BC100807 BC100808 BC100809 BC100810 AK300196 TSC_hg19_v1_chr22_+_24199338	-37123	+	AB528119 CU013077 CU013365 CU691264 TSC_hg19_v1_chr22_-_24181194 AK096976 AK125830 BC057830 CR456372 AL389876 NM_001002862 NM_001135751 NM_198440	-55136	-	TSC_hg19_v1_chr22_+_24236567 BC022414 NM_002415 BC013976	240	+	AK311929 TSC_hg19_v1_chr22_+_24236569	250	+	EF611126 TSC_hg19_v1_chr22_+_24236575	255	+	NM_001024939|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK304409|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK308589|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK316049|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##CR456373|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##CU013078|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##CU013366|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AF443201|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AJ271290|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##NM_001024938|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##NM_030807|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK314502|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK315937|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK075467|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK296169|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK308602|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC063525|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC100807|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC100808|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC100809|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC100810|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK300196|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##CU013077|DERL3|91319|Der1-like domain family, member 3##CU013365|DERL3|91319|Der1-like domain family, member 3##AK096976|DERL3|91319|Der1-like domain family, member 3##AK125830|DERL3|91319|Der1-like domain family, member 3##BC057830|DERL3|91319|Der1-like domain family, member 3##CR456372|DERL3|91319|Der1-like domain family, member 3##AL389876|DERL3|91319|Der1-like domain family, member 3##NM_001002862|DERL3|91319|Der1-like domain family, member 3##NM_001135751|DERL3|91319|Der1-like domain family, member 3##NM_198440|DERL3|91319|Der1-like domain family, member 3##BC022414|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##NM_002415|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC013976|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##AK311929|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)	0.17107	
chr5	136556237	136556373	reg1019659.p1	7.248	+	NM_001167576 NM_001167577 NM_020389	-855142	-	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-1087721	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-1087776	+	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	277936	-	TSC_hg19_v1_chr5_-_136834420 AK094489	278122	-	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	278675	-	NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.930911	CTCF.p2:8:0.931
chr10	3853765	3853946	reg1018941.p2	7.247	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-26346	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-26544	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-638850	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1014563	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1151659	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1151768	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr3	156919581	156919676	reg1019074.p1	7.247	+	NM_020307 AK122738	-41114	-	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	-41719	-	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-375517	+	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	235022	+	CU691278 AB384625 HQ258524 AL713656 BC101660 BC113555 NM_001167917	293588	-	AK027625 NM_024621	297765	-	NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long##HQ258524|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AL713656|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC101660|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC113555|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167917|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AK027625|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_024621|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	0.982214	CTCF.p2:16:0.972
chr1	156471159	156471279	reg1019869.p2	7.246	+	AK310187 TSC_hg19_v1_chr1_-_156470568	-651	-	TSC_hg19_v1_chr1_-_156470563 BC018985 BC032479 AB210005 BC064988	-669	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	-701	-	AY253300 TSC_hg19_v1_chr1_-_156542352 AB105103 BC131536 BC033549 NM_178229	71143	-	NM_001105669	78299	+	TSC_hg19_v1_chr1_+_156561567 AK294835 AK298222 BC056917 NM_144772 AJ315849 BC100931 BC100932 BC100933 BC100934	90336	+	AK310187|MEF2D|4209|myocyte enhancer factor 2D##BC018985|MEF2D|4209|myocyte enhancer factor 2D##BC032479|MEF2D|4209|myocyte enhancer factor 2D##AB210005|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D##AY253300|IQGAP3|128239|IQ motif containing GTPase activating protein 3##AB105103|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC131536|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC033549|IQGAP3|128239|IQ motif containing GTPase activating protein 3##NM_178229|IQGAP3|128239|IQ motif containing GTPase activating protein 3##NM_001105669|TTC24|164118|tetratricopeptide repeat domain 24##AK294835|APOA1BP|128240|apolipoprotein A-I binding protein##AK298222|APOA1BP|128240|apolipoprotein A-I binding protein##BC056917|APOA1BP|128240|apolipoprotein A-I binding protein##NM_144772|APOA1BP|128240|apolipoprotein A-I binding protein##AJ315849|APOA1BP|128240|apolipoprotein A-I binding protein##BC100931|APOA1BP|128240|apolipoprotein A-I binding protein##BC100932|APOA1BP|128240|apolipoprotein A-I binding protein##BC100933|APOA1BP|128240|apolipoprotein A-I binding protein##BC100934|APOA1BP|128240|apolipoprotein A-I binding protein	0.0	
chr5	61756468	61756574	reg1018398.p1	7.246	+	AK302781 NM_001134779	-41811	+	TSC_hg19_v1_chr5_+_61708589 NM_016338 AK001696 BC033776	-47897	+	TSC_hg19_v1_chr5_-_61699730 BC002841 BC017885 NM_014473 AK292723	-56762	-	AK123022 NM_181506 BX649157 AY358733 BC110838 AY280614	118117	+	AF498978 BC069159 NM_000524 AB464441 BC136263 TSC_hg19_v1_chr5_-_63257719 AK291429 AK311460	1501141	-	AK314187 TSC_hg19_v1_chr5_-_63258084	1501501	-	AK302781|IPO11|51194|importin 11##NM_001134779|IPO11|51194|importin 11##NM_016338|IPO11|51194|importin 11##AK001696|IPO11|51194|importin 11##BC033776|IPO11|51194|importin 11##BC002841|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##BC017885|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##NM_014473|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##AK292723|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##AK123022|LRRC70|100130733|leucine rich repeat containing 70##NM_181506|LRRC70|100130733|leucine rich repeat containing 70##AY358733|LRRC70|100130733|leucine rich repeat containing 70##BC110838|LRRC70|100130733|leucine rich repeat containing 70##AY280614|LRRC70|100130733|leucine rich repeat containing 70##AF498978|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC069159|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_000524|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC136263|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK291429|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A	0.973863	CTCF.p2:-17:0.974
chr9	108371422	108371556	reg1020782.p1	7.246	+	TSC_hg19_v1_chr9_+_108320420 NM_001079802 NM_001198963 NM_006731 AK300840 AK304460 BC058842 AB008226 AB609007	-51066	+	AK309817 TSC_hg19_v1_chr9_+_108210342 NM_001145313 NM_031919 NM_207647 AF088031 AK299350 AK296433 AK299491 AF316830	-161226	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	-364422	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	53268	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	85364	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	85429	+	NM_001079802|FKTN|2218|fukutin##NM_001198963|FKTN|2218|fukutin##NM_006731|FKTN|2218|fukutin##AK300840|FKTN|2218|fukutin##AK304460|FKTN|2218|fukutin##BC058842|FKTN|2218|fukutin##AB008226|FKTN|2218|fukutin##AK309817|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001145313|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_031919|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_207647|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF088031|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299350|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK296433|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299491|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF316830|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B	0.832091	CTCF.p2:-13:0.832
chr1	197662247	197662357	reg1016856.p2	7.245	+	AK000061 TSC_hg19_v1_chr1_-_197552357	-109970	-	NM_001193640 NM_201253 AK299368 AK289733 AK307844 AB208923 AF154671 AY043324 AY043325 BC136271 BC143726 AJ748821	-424865	+	BC132818 BC136600 AK128549 AY163816 NM_194314	-492649	-	TSC_hg19_v1_chr1_-_197744376 BC022561	82032	-	TSC_hg19_v1_chr1_-_197744396 BC063456	82094	-	TSC_hg19_v1_chr1_-_197744438 AK091207 AX746849 BC063877	82163	-	AK000061|DENND1B|163486|DENN/MADD domain containing 1B##NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)##NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)##AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)##AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)##AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)##AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)##AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)##BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)##BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)##AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)##BC132818|ZBTB41|360023|zinc finger and BTB domain containing 41##BC136600|ZBTB41|360023|zinc finger and BTB domain containing 41##AK128549|ZBTB41|360023|zinc finger and BTB domain containing 41##AY163816|ZBTB41|360023|zinc finger and BTB domain containing 41##NM_194314|ZBTB41|360023|zinc finger and BTB domain containing 41##BC022561|DENND1B|163486|DENN/MADD domain containing 1B##BC063456|DENND1B|163486|DENN/MADD domain containing 1B##AK091207|DENND1B|163486|DENN/MADD domain containing 1B##BC063877|DENND1B|163486|DENN/MADD domain containing 1B	0.172224	
chr20	2981679	2981799	reg1019776.p2	7.245	+	TSC_hg19_v1_chr20_+_2944935 CU693258 DQ891155 DQ894334	-36813	+	NM_080841 X53364 TSC_hg19_v1_chr20_+_2903902	-77858	+	TSC_hg19_v1_chr20_+_2854126 NM_080840 AK294990 AK297293 BX571753 AB209702 AK290233 AK294499 BC027308 X54890	-127494	+	AF036330 NM_001501 NM_178331 NM_178332 BC069362 BC115399 BC115400	42528	+	TSC_hg19_v1_chr20_+_3026675 NM_030811 BC013018 AF308301	44955	+	BC069144 NM_000915 BC101841 BC101843 M25650 AB463993 M62611	70580	+	DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##NM_080841|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##X53364|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##NM_080840|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK294990|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK297293|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BX571753|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AB209702|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK290233|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK294499|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BC027308|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##X54890|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AF036330|GNRH2|2797|gonadotropin-releasing hormone 2##NM_001501|GNRH2|2797|gonadotropin-releasing hormone 2##NM_178331|GNRH2|2797|gonadotropin-releasing hormone 2##NM_178332|GNRH2|2797|gonadotropin-releasing hormone 2##BC069362|GNRH2|2797|gonadotropin-releasing hormone 2##BC115399|GNRH2|2797|gonadotropin-releasing hormone 2##BC115400|GNRH2|2797|gonadotropin-releasing hormone 2##NM_030811|MRPS26|64949|mitochondrial ribosomal protein S26##BC013018|MRPS26|64949|mitochondrial ribosomal protein S26##AF308301|MRPS26|64949|mitochondrial ribosomal protein S26##BC069144|OXT|5020|oxytocin, prepropeptide##NM_000915|OXT|5020|oxytocin, prepropeptide##BC101841|OXT|5020|oxytocin, prepropeptide##BC101843|OXT|5020|oxytocin, prepropeptide##M25650|OXT|5020|oxytocin, prepropeptide##M62611|OXT|5020|oxytocin, prepropeptide	0.435846	CTCF.p2:9:0.436
chr20	58838183	58838308	reg1019757.p1	7.244	+	TSC_hg19_v1_chr20_+_58713521 AK309218 AK092805 AX747739	-124711	+	TSC_hg19_v1_chr20_+_58630979 AK091179 AX746831 NM_173644	-207250	+	BC062570 NM_021810 AK074477	-266823	+	TSC_hg19_v1_chr20_+_59827453 BC101651 BC112150 NM_001794 AK315192 L34059	989260	+	AK308345 NM_001252338	1236231	+	NM_001252339 AK124724	1336579	+	AK092805|LOC284757|284757|uncharacterized LOC284757##AK091179|C20orf197|284756|chromosome 20 open reading frame 197##NM_173644|C20orf197|284756|chromosome 20 open reading frame 197##BC062570|CDH26|60437|cadherin 26##NM_021810|CDH26|60437|cadherin 26##AK074477|CDH26|60437|cadherin 26##BC101651|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC112150|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001794|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK315192|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##L34059|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK308345|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252338|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252339|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK124724|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)	0.931162	CTCF.p2:5:0.931
chr2	45812513	45812656	reg1020230.p1	7.244	+	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-17456	-	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	-576034	-	AJ012611 NM_005413 AL162671	-643538	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	25823	-	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	66490	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	712007	+	AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AJ012611|SIX3|6496|SIX homeobox 3##NM_005413|SIX3|6496|SIX homeobox 3##AL162671|SIX3|6496|SIX homeobox 3##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1	0.0	
chr20	43767576	43767680	reg1018606.p1	7.243	+	AB464352 AY358678 AY037803 NM_080869	-14532	-	CU691668 AY038181 BC039173 AY358822 NM_145652	-23861	-	BC132957 BC132959 BC144234 TSC_hg19_v1_chr20_-_43729732 AK289735 NM_002251	-37939	-	NM_002638 BC010952 DQ892710 DQ895962 AB590207 Z18538 CR542234	35923	+	NM_003007 AK291811 BC005229 BC007096 BC011442 BC055416 J04440 AB591040 BT007177 CU691118	68037	+	BC005262 M81652 NM_003008 AK312932 AX772816 BC056675 BC070306 AB464703	82391	+	AY358678|WFDC12|128488|WAP four-disulfide core domain 12##AY037803|WFDC12|128488|WAP four-disulfide core domain 12##NM_080869|WFDC12|128488|WAP four-disulfide core domain 12##AY038181|WFDC5|149708|WAP four-disulfide core domain 5##BC039173|WFDC5|149708|WAP four-disulfide core domain 5##AY358822|WFDC5|149708|WAP four-disulfide core domain 5##NM_145652|WFDC5|149708|WAP four-disulfide core domain 5##BC132957|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC132959|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC144234|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##AK289735|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##NM_002251|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##NM_002638|PI3|5266|peptidase inhibitor 3, skin-derived##BC010952|PI3|5266|peptidase inhibitor 3, skin-derived##DQ892710|PI3|5266|peptidase inhibitor 3, skin-derived##DQ895962|PI3|5266|peptidase inhibitor 3, skin-derived##Z18538|PI3|5266|peptidase inhibitor 3, skin-derived##CR542234|PI3|5266|peptidase inhibitor 3, skin-derived##NM_003007|SEMG1|6406|semenogelin I##BC005229|SEMG1|6406|semenogelin I##BC007096|SEMG1|6406|semenogelin I##BC011442|SEMG1|6406|semenogelin I##BC055416|SEMG1|6406|semenogelin I##J04440|SEMG1|6406|semenogelin I##BT007177|SEMG1|6406|semenogelin I##BC005262|SEMG2|6407|semenogelin II##M81652|SEMG2|6407|semenogelin II##NM_003008|SEMG2|6407|semenogelin II##AK312932|SEMG2|6407|semenogelin II##BC056675|SEMG2|6407|semenogelin II##BC070306|SEMG2|6407|semenogelin II	0.855056	CTCF.p2:-15:0.835
chr6_cox_hap2	2357700	2357821	reg1027996.p1	7.243	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.669371	CTCF.p2:14:0.669
chr14	107048510	107048647	reg1018913.p2	7.242	+	AF267786 AF460742 AF460743 DQ454547 DQ454549 DQ454453 DQ454546 DQ454587 DQ454772 DQ523855 DQ454644 GU552737 DQ454456 DQ454588 DQ454927 EU433863 DQ454420 DQ454430 DQ454879 DQ454417 DQ454704 DQ454916 DQ454924 DQ454969 GU552772 DQ454423 DQ455004 EU099273 GU552771 DQ454935 DQ523903 DQ454770 DQ454843 FJ840010 FJ840025 FJ840144 FJ840161 FJ840267 FJ840276 FJ840292 FJ840293 FJ840346 FJ840350 FJ840358 FJ840360 FJ840363 FJ873816 FJ873820 FJ873848 FJ873865 FJ873868 FJ873928 FJ873940 FJ873954 FJ873964 FJ873985 FJ874015 FJ874045 FJ874091 GQ232837 HM116178 HM116213 HM116223 AJ008166 EU433880 GQ232769 GQ232840 GQ232959 EF175426 FJ694889 EF441751 EF441753 AY998718 U44492 U44503 U44504 U44505 AF017462 AJ008170 AJ008172 AJ008178 AJ008203 AJ487495 AJ230634 AJ230635 AJ230636 AJ230637 AJ230638 AJ230640 AJ230641 AJ230642 AJ230643 AJ230644 AJ230646 AJ230649 AJ230652 AJ230655 AJ230656 AJ230657 M34028 AY577299 S73611 S73613 FJ385326 GQ232913 GQ232958 GU552732 GU552750 AM279543 AF085655 AF085656 EU099270 AM233802 AM233804 EU099059 EU099279 EU099288 GQ232907 AF209895 AF209899 AF211932 AF343357 AF343358 AF343374 AF343390 AF343395 AF343401 AF343405 AF343419 AF343420 U86784 AJ862553 AJ862555 AJ862556 AJ862558 AJ862559 AJ862560 AJ862561 AJ862562 AJ862563 AJ862564 AJ862566 AJ862569 AJ862573 AM233783 AM233785 AM233805 AM233806 AM233807 AM233841 AY062302 HM774009 HM996214 AF103038 EU099234 HM773977 HM774742 AY062301 HM773976 HM774100 HM774513 HM774833 HM775004 HQ704065 HQ704066 HQ704067 HQ704068 AF103039 HM774204 HM774915 JN110745 JN110851 JN111173 JN111174 JN111195 JN111203 JN111206 JN111213 L04327 L04331 FJ385346 FJ385432 HM774001 HM774101 HM774244 HM774256 HM774288 HM774294 HM774334 HM774417 HM774549 HM774581 HM774591 HM774745 HM774776 HM774778 HM774796 HM774808 HM774855 HM774958 HM774983 HQ704004 HQ704052 HM775063 Z46853 AF103177 DQ524149 EU146312 EU146344 EU146346 EU146382 AB067195 AF103056 AY393315 AY393569 AY393571 EU099233 AF306373 AJ580927 AY062322 AY376089 U70236 AY393249 AY393314 AY393316 AY393318 AY393319 AY393320 AY393321 AY393455 AY393456 AY393457 AY393458 AY393459 AY393463 AY393466 AY393471 AY393566 AY393567 AY393568 AY393570 AY393572 AY393573 EU099231 EU099232 M34022 U00574 AF110479 AY062303 DQ926264 DQ926266 DQ926273 AF129750 AM233827 AM233828 AM233830 AM233831 AM233832 AM233833 AM233836 AM233838 AY640515 AB066833 AY941987 DQ168569 HM996472 HQ378399 AF021959 AJ239373 AJ272398 AJ555263 AY685303 DQ100803 DQ490742 DQ523920 DQ523934 DQ523971 DQ524022 DQ524049 DQ524147 DQ524150 DQ524160 DQ926054 GU570396 GU570398 HM995095 HM995420 HM995456 HM995460 HM995529 HM995571 HM995573 HM995577 HM995607 HM995969 HM996171 HM996234 HM996245 HM996273 HM996421 HM996528 HM996547 HQ378338 U77555 X94019 X94043 Z46759 HM995213 AB063835 AB063897 AB063925 AB066826 AB066832 AB066935 AB067154 AB067157 AB067159 AB067175 AB067326 AB067330 AB067334 AB067392 AB245095 AF174110 AF394197 AM279622 AY640502 AY640546 AY941916 AY941923 AY941958 AY971039 AY971068 AY971072 AY971073 AY971085 AY971113 AY971118 AY971121 AY971122 DQ100861 DQ100955 DQ100988 DQ490743 DQ926034 DQ926082 DQ926086 DQ926177 DQ926233 DQ926269 DQ926292 DQ926295 DQ926339 DQ926351 DQ926360 DQ926597 DQ926609 DQ926637 DQ926643 DQ926654 EU794427 EU794430 EU794443 FJ385310 FJ385369 GU570400 GU570406 HQ378329 HQ378361 HQ378384 X61649 AB063926 AB066971 AB066985 AB067015 AB067070 AB067074 AB067100 AB067116 AB067125 AB067129 AB067241 AF062125 AF062157 AF078940 AF078941 AF099197 AF110480 AF110484 AF110486 AF110487 AF174068 AF442760 AJ002767 AJ002771 AJ002772 AJ002773 AJ002774 AJ002775 AJ006165 AJ249378 AJ249636 AJ276099 AJ399826 AJ414007 AJ491906 AJ491907 AJ491913 AJ491914 AJ555254 AY033242 AY033243 AY033250 AY033274 AY033275 AY033276 AY033281 AY033282 AY033286 AY033288 AY640520 AY781870 AY941877 AY941878 AY941879 AY941919 AY941920 AY941921 AY971098 DQ065619 DQ065621 DQ065625 DQ065655 DQ065657 DQ065658 DQ205181 DQ379476 DQ490737 DQ490744 DQ926149 DQ926201 DQ926390 DQ926391 DQ926462 DQ926465 DQ926503 DQ926525 DQ926533 DQ926560 HM152490 HQ378409 L12198 L26537 U22381 U44493 U77538 U77539 U77541 U77544 U77547 U77548 U77549 U77550 U77551 U77552 U77553 U77557 U77558 U77559 U77560 U77561 U77562 U77563 U77564 U77565 U77566 U77567 X87447 X94002 X94004 X94005 X94006 X94028 X94029 X94030 X94031 X94032 X94038 X94039 X94041 X94044 X94045 X94046 X94048 X94050 X94051 X94052 X94053 X94055 X94058 X94059 X94061 X94062 X94063 X94066 X94071 X94072 X94073 X94077 Z46760 Z97037 DQ535275 DQ535319 DQ535340 DQ535347 DQ535361 DQ535401 DQ535430 DQ535447 DQ535450 DQ535454 DQ535458 DQ926623 EF177983 EF177986 EF178042 EF178049 EF178067 EF178105 FJ195497 FJ195499 FJ195517 FJ195521 FJ195527 FJ195537 JN252502 Z26829 Z26830 Z26832 Z26833 Z26839 Z26842 Z26843 Z26844 HM995790 HM995656 HM995886 M27125 U77535 U77543 U77554 U77556 AY393198 AY393202 HM995637 HM995880 AY392957 AY392958 AY392962 AY392964 AY392965 AY392966 AY392968 AY392969 AY392970 AY392976 AY392978 AY392980 AY392984 AY393084 AY393086 AY393087 AY393088 AY393090 AY393092 AY393094 AY393096 AY393097 AY393185 AY393186 AY393187 AY393188 AY393189 AY393191 AY393192 AY393193 AY393194 AY393195 AY393196 AY393197 AY393199 AY393200 AY393201 AY393203 AY393204 AF085657 AF085658 AF085659 AM233808 AF052379 AF062154 AF062214 AF348829 AF348830 AF348831 AF348832 AF348833 AF348834 AJ131060 AM233779 AM233780 AM233803 AM233834 AM233839 AY190828 L03679 X65912 X65913 X65914 X65915 Z47219 Z47225 X58402 BC014258 X58401 X58400 X58397 BC089417 BC078670 TSC_hg19_v1_chr14_-_107035221	-13587	-	TSC_hg19_v1_chr14_-_107013478 AK093806 AK097303 AK125632 AK126320 AK129510 AX748317	-35102	-	DQ187707 GU552700 GU552764 AY003783 EF175429 FJ694883 EU099078 EU099213 AM183990 EU099124 HM774924 HM774242 JN110729 JN110849 AF103239 FJ385422 FJ385433 HM773968 HM773995 HM774338 HM774389 HM774601 HM774867 HM996424 HQ704020 FJ385411 EU146318 JN110975 AF062300 AF062305 DQ524053 HM994912 HM994914 HM994916 HM994920 HM995673 HM995674 HM995675 HM995676 HM995783 HM995910 HM995945 HM996441 HM996522 AF062299 AF471505 DQ187607 DQ322806 DQ840692 DQ840693 DQ840702 DQ840814 AM279609 DQ926615 EF178081 X99992 AB063924 AB066892 AB066969 AB067011 AB067080 AB067263 AF394199 AF455925 AF459632 AF471500 AF471503 AF471504 AJ300805 AJ579185 AY055477 AY055483 AY640482 AY941852 D83692 DQ005278 DQ005282 DQ100801 DQ926649 GU570351 GU570352 GU570354 L12185 L12186 X64240 Y11898 Z96974 HM995768 AJ519245 AJ519224 AJ519230 AJ519233 AJ519246 AJ519249 AJ519251 AJ519253 AJ519255 HM995877 AJ519222 AJ519299 AY393054 AY393058 AY393158 AY393161 AY190818 Z36887 AY623427 X52894 BC090938 TSC_hg19_v1_chr14_-_107013458	-35288	-	AF028099 AF460754 DQ454615 DQ523869 GQ232779 GQ232881 GU552765 FJ873979 FJ873984 FJ874049 FJ874062 FJ874084 DQ454628 AY003743 AY003830 DQ523889 DQ523867 DQ454655 DQ523892 DQ523925 FJ840112 FJ840322 FJ873963 DQ454805 DQ523873 FJ840063 FJ840064 FJ840091 FJ840093 FJ840096 FJ840098 FJ840147 FJ840240 FJ840275 FJ840277 FJ840278 FJ840279 FJ840280 FJ840281 FJ840282 FJ840283 FJ840285 FJ840286 FJ840288 FJ840289 FJ840290 FJ840291 FJ840294 FJ840296 FJ840298 FJ840299 FJ840300 FJ840301 FJ840303 FJ873817 FJ873838 FJ873840 FJ873886 FJ873926 FJ873934 FJ874029 FJ874031 FJ874050 FJ874058 AJ008233 DQ523926 AY003838 AY003851 EF175410 EF091918 EU667609 JF810270 EU099077 EU099148 AF103213 AJ010335 AM183984 DQ097899 HM774214 EF555586 AF062229 FJ385338 FJ385339 FJ385347 GQ504915 GQ504957 HM774086 HM774115 HM774155 HM774774 EU146321 S73143 U85229 AY062306 AF035787 AF035788 DQ100793 DQ100813 AY941912 DQ187711 DQ524134 DQ926275 HM995353 HM995355 HM995441 HM995442 HM995443 HM995444 HM995445 HM995446 HM995470 HM995471 HM995475 HM995476 HM996019 HM996347 DQ187673 DQ322745 DQ322877 DQ322968 DQ322969 DQ322970 DQ322971 DQ322972 U00540 AB373623 AY530312 AY530316 AY686913 AY941884 AY986398 DQ100978 DQ926080 DQ926111 DQ926299 DQ926303 DQ926575 DQ926577 DQ926583 DQ926598 AB066888 AB067000 AB363089 AB363160 AB373617 AB373626 AF006517 AF006525 AF035042 AF174059 AF471510 AF471512 AF471528 AF471529 AF471530 AJ389169 AJ488540 AJ556641 AJ579109 AJ579266 AY640512 AY686909 AY941887 AY941891 AY941915 DQ535286 DQ535377 DQ535410 DQ926146 DQ926152 DQ926467 EF177944 EF177957 EF178005 EF178011 EF178016 EF178078 EF178107 FJ195522 FJ773245 FJ773246 GU570355 HM152495 HM152503 HM152507 HM451460 S76131 U00490 U00498 U00567 X62958 X64243 X77472 X99353 Z33902 Z33904 Z96964 M18520 M18521 HM995907 AY393055 AF062122 AJ548507 AY190822 X81724 X81730 X81735 L08085 BC072419 X61011 AK092785 AX747729 TSC_hg19_v1_chr14_-_107049194	367	-	AB063741 AY393018 AF062170 AY393124 Z47215 AK126281 TSC_hg19_v1_chr14_-_107066261	17586	-	DQ454429 DQ454922 HM116180 EF091913 EF175413 GQ232868 GQ232976 EF583666 EF407827 EF407822 AJ007320 AF308556 AF103132 HM774392 HQ703981 JN110710 JN111102 HM774550 AY393601 AY393649 AY393679 EU099114 EU099216 DQ100711 AB066834 AF174037 AY050706 DQ005304 FJ492918 HM994925 HQ689790 Z80842 DQ524125 DQ535395 HQ378413 DQ100675 HM996225 AB067078 AY866569 AY971062 DQ065681 DQ926239 EF028212 HM994895 HM994932 HM994933 HM994938 HM994946 HM994963 HM994965 HM995218 HM995258 HM995267 HM995314 HM996512 HM996546 AF021955 GU570262 AF062174 AF062225 AF062279 TSC_hg19_v1_chr14_-_107078867	30147	-	BC014258|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089417|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC078670|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC072419|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126281|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.347986	CTCF.p2:18:0.348
chr16	82401700	82401810	reg1018295.p1	7.242	+	CU689076 AB463897 TSC_hg19_v1_chr16_-_82203821 BC005242 BC031017 BC011020 BC029395 X98263 AK222667 AK314163 NM_005792	-197945	-	TSC_hg19_v1_chr16_+_82068989 DQ893100 DQ896372	-332762	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	-332823	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	258639	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	258834	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	258914	+	BC005242|MPHOSPH6|10200|M-phase phosphoprotein 6##BC031017|MPHOSPH6|10200|M-phase phosphoprotein 6##BC011020|MPHOSPH6|10200|M-phase phosphoprotein 6##BC029395|MPHOSPH6|10200|M-phase phosphoprotein 6##X98263|MPHOSPH6|10200|M-phase phosphoprotein 6##AK222667|MPHOSPH6|10200|M-phase phosphoprotein 6##AK314163|MPHOSPH6|10200|M-phase phosphoprotein 6##NM_005792|MPHOSPH6|10200|M-phase phosphoprotein 6##DQ893100|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##DQ896372|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)	0.997662	CTCF.p2:-10:0.998
chr7	120766996	120767125	reg1015507.p1	7.242	+	AK025639 AK225313 TSC_hg19_v1_chr7_+_120702920	-64187	+	NM_001105533	-137616	+	TSC_hg19_v1_chr7_+_120628867 AL832638	-138164	+	AF152584 NM_016087	198360	+	AF169963 NM_057168	202029	+	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	269277	-	AK025639|C7orf58|79974|chromosome 7 open reading frame 58##AK225313|C7orf58|79974|chromosome 7 open reading frame 58##NM_001105533|C7orf58|79974|chromosome 7 open reading frame 58##AL832638|C7orf58|79974|chromosome 7 open reading frame 58##AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C	0.506366	CTCF.p2:-30:0.506
chrX	49518971	49519086	reg1019395.p1	7.242	+	BC004861 AF058989 NM_003785	-58447	-	NM_001040663 NM_001468 BC005363 BC036094 BC069470	-155389	+	NM_001127212 U19143 BC069309 BC069397 BC069558 U19142	-164887	+	NM_007003 AK312039 AF275258 AJ005894 AK092503 AX747575	74899	+	NM_001145073	125441	+	TSC_hg19_v1_chrX_+_49687274 AK092049 NM_001127898 NM_001127899 AK056560	168218	+	BC004861|PAGE1|8712|P antigen family, member 1 (prostate associated)##AF058989|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_003785|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_001040663|GAGE1|2543|G antigen 1##NM_001468|GAGE1|2543|G antigen 1##BC005363|GAGE1|2543|G antigen 1##BC036094|GAGE1|2543|G antigen 1##BC069470|GAGE1|2543|G antigen 1##NM_001127212|GAGE2A|729447|G antigen 2A##U19143|GAGE2C|2574|G antigen 2C##BC069309|GAGE2A|729447|G antigen 2A##BC069397|GAGE2A|729447|G antigen 2A##BC069558|GAGE2A|729447|G antigen 2A##U19142|GAGE1|2543|G antigen 1##NM_007003|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK312039|PAGE4|9506|P antigen family, member 4 (prostate associated)##AF275258|PAGE4|9506|P antigen family, member 4 (prostate associated)##AJ005894|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK092503|PAGE4|9506|P antigen family, member 4 (prostate associated)##NM_001145073|USP27X|389856|ubiquitin specific peptidase 27, X-linked##AK092049|CLCN5|1184|chloride channel 5##NM_001127898|CLCN5|1184|chloride channel 5##NM_001127899|CLCN5|1184|chloride channel 5##AK056560|CLCN5|1184|chloride channel 5	0.087854	
chr11	20154060	20154195	reg1018720.p1	7.241	+	AK290458 TSC_hg19_v1_chr11_+_20070637	-83504	+	TSC_hg19_v1_chr11_+_20049136 AK307574	-104995	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	-109739	+	NM_001029865	27742	-	NM_006410 TSC_hg19_v1_chr11_+_20385245 NM_001098521	231115	+	TSC_hg19_v1_chr11_+_20385268 AK292092 NM_001098520	231154	+	AK290458|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##NM_001029865|DBX1|120237|developing brain homeobox 1##NM_006410|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098521|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AK292092|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098520|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa	0.507333	CTCF.p2:26:0.507
chr12	103204991	103205140	reg1018756.p1	7.241	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-330683	-	M11568 TSC_hg19_v1_chr12_-_102874344	-330723	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-330743	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	105901	-	TSC_hg19_v1_chr12_-_103311062 BC026251	105998	-	L47726 NM_000277 U49897	106315	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.99337	CTCF.p2:27:0.993
chr17	1934016	1934126	reg1018488.p3	7.241	+	TSC_hg19_v1_chr17_+_1933446 S81752 U34880 AF321876 NM_001383 AK314015 BC096086 BC096087 BC096088 BC096089 BC003099	-650	+	BC128608 NM_178568	-5894	-	TSC_hg19_v1_chr17_+_1733335 M63488 AB209732 BC018126 AB385027 HQ258560	-200722	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	11237	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	24327	+	DQ187313 NM_001098202	25486	+	S81752|DPH1|1801|DPH1 homolog (S. cerevisiae)##U34880|DPH1|1801|DPH1 homolog (S. cerevisiae)##AF321876|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_001383|DPH1|1801|DPH1 homolog (S. cerevisiae)##AK314015|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096086|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096087|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096088|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096089|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC003099|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC128608|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_178568|RTN4RL1|146760|reticulon 4 receptor-like 1##M63488|RPA1|6117|replication protein A1, 70kDa##AB209732|RPA1|6117|replication protein A1, 70kDa##BC018126|RPA1|6117|replication protein A1, 70kDa##HQ258560|RPA1|6117|replication protein A1, 70kDa##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1	0.0	
chr5	31186902	31187055	reg1019345.p2	7.241	+	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	-3714575	+	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	-4148307	-	NM_006727	-6541894	-	NM_004932 TSC_hg19_v1_chr5_+_31193792 AK291290	6818	+	TSC_hg19_v1_chr5_+_31193875 BC000019 AK024238	6899	+	TSC_hg19_v1_chr5_-_31532201 AK308093 AF189011 BC054003 BX647724 NM_001100412 NM_013235	345244	-	BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK308093|DROSHA|29102|drosha, ribonuclease type III##AF189011|DROSHA|29102|drosha, ribonuclease type III##BC054003|DROSHA|29102|drosha, ribonuclease type III##BX647724|DROSHA|29102|drosha, ribonuclease type III##NM_001100412|DROSHA|29102|drosha, ribonuclease type III##NM_013235|DROSHA|29102|drosha, ribonuclease type III	0.097376	
chr6	80577977	80578112	reg1018074.p1	7.241	+	TSC_hg19_v1_chr6_+_80341019 AF340151 NM_031469 BC109043 BC109044 AK311757 BC040489 AK074506 BC052987 BC060799 BC070059 AJ297972	-236970	+	TSC_hg19_v1_chr6_-_80247114 AK299314 BX648161 BC050327 NM_001122769 NM_181714	-330915	-	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	-633619	-	NM_001243308	2092	-	TSC_hg19_v1_chr6_-_80656870 CU691582 DQ891229 AF277094 BC038506 AY037298 AK310625 AK312511 AK055277 DQ426871 NM_022726	79048	-	NM_001166691 NM_003318 TSC_hg19_v1_chr6_+_80714370 AX775733 BC032858 BC000633 AK292460	136308	+	AF340151|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_031469|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109043|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109044|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK311757|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC040489|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK074506|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC052987|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC060799|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC070059|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AJ297972|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK299314|LCA5|167691|Leber congenital amaurosis 5##BX648161|LCA5|167691|Leber congenital amaurosis 5##BC050327|LCA5|167691|Leber congenital amaurosis 5##NM_001122769|LCA5|167691|Leber congenital amaurosis 5##NM_181714|LCA5|167691|Leber congenital amaurosis 5##AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7##DQ891229|ELOVL4|6785|ELOVL fatty acid elongase 4##AF277094|ELOVL4|6785|ELOVL fatty acid elongase 4##BC038506|ELOVL4|6785|ELOVL fatty acid elongase 4##AY037298|ELOVL4|6785|ELOVL fatty acid elongase 4##AK310625|ELOVL4|6785|ELOVL fatty acid elongase 4##AK312511|ELOVL4|6785|ELOVL fatty acid elongase 4##AK055277|ELOVL4|6785|ELOVL fatty acid elongase 4##DQ426871|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_022726|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_001166691|TTK|7272|TTK protein kinase##NM_003318|TTK|7272|TTK protein kinase##AX775733|TTK|7272|TTK protein kinase##BC032858|TTK|7272|TTK protein kinase##BC000633|TTK|7272|TTK protein kinase##AK292460|TTK|7272|TTK protein kinase	0.898265	CTCF.p2:-9:0.898
chr1	11538836	11538971	reg1020814.p1	7.240	+	TSC_hg19_v1_chr1_+_11333566 BC004468 BT006832	-205358	+	TSC_hg19_v1_chr1_+_11333254 AK222808 NM_013319 AK074890 AF117064	-205587	+	TSC_hg19_v1_chr1_-_11322609 NM_004958	-216296	-	TSC_hg19_v1_chr1_+_11539211 AB593117 AK311332 AB037758 NM_020780	332	+	AB463629 CR542110 CU692940 DQ892848 DQ892849 DQ896095 TSC_hg19_v1_chr1_-_11714417	175503	-	AK055344 NM_183412	175528	+	BC004468|UBIAD1|29914|UbiA prenyltransferase domain containing 1##BT006832|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK222808|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_013319|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK074890|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AF117064|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_004958|MTOR|2475|mechanistic target of rapamycin (serine/threonine kinase)##AB593117|PTCHD2|57540|patched domain containing 2##AB037758|PTCHD2|57540|patched domain containing 2##NM_020780|PTCHD2|57540|patched domain containing 2##CR542110|FBXO2|26232|F-box protein 2##DQ892848|FBXO2|26232|F-box protein 2##DQ892849|FBXO2|26232|F-box protein 2##DQ896095|FBXO2|26232|F-box protein 2##AK055344|FBXO44|93611|F-box protein 44##NM_183412|FBXO44|93611|F-box protein 44	0.237409	CTCF.p2:-5:0.216
chr3	124882694	124882828	reg1019505.p1	7.240	+	BC063528 TSC_hg19_v1_chr3_-_124842461	-40306	-	AB384586 NM_020733 TSC_hg19_v1_chr3_-_124774842	-107961	-	BC067235 TSC_hg19_v1_chr3_-_124732404	-150369	-	AF345197 HQ258349 BC126158 BC126160 AF390442 NM_001195483	47456	-	AK123001 TSC_hg19_v1_chr3_-_124931591 AX721165 AK131070 NM_024628	48824	-	AF039019 AL833616 AF432210 AJ236885 L04282 BC035591 BC018971 AK314203 TSC_hg19_v1_chr3_-_125094153 BC050260 NM_021964	211339	-	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)##BC067235|HEG1|57493|HEG homolog 1 (zebrafish)##AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AK123001|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_024628|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF039019|ZNF148|7707|zinc finger protein 148##AL833616|ZNF148|7707|zinc finger protein 148##AF432210|ZNF148|7707|zinc finger protein 148##AJ236885|ZNF148|7707|zinc finger protein 148##L04282|ZNF148|7707|zinc finger protein 148##BC035591|ZNF148|7707|zinc finger protein 148##BC018971|ZNF148|7707|zinc finger protein 148##AK314203|ZNF148|7707|zinc finger protein 148##BC050260|ZNF148|7707|zinc finger protein 148##NM_021964|ZNF148|7707|zinc finger protein 148	0.0	
chr11	30935844	30935954	reg1020961.p1	7.239	+	TSC_hg19_v1_chr11_-_30607762 AB209163 AK314833 NM_001145399	-328054	-	TSC_hg19_v1_chr11_-_30605748 AK309809	-330151	-	CU689190 NM_001584 U57911	-333920	-	BX647348 NM_020869	78333	-	AY247970 AK126066 NM_181807	455439	-	TSC_hg19_v1_chr11_+_31391404 NM_181706 AK123087 AL833128 AK289665 BC036571 BC044931 BC063804	455503	+	AB209163|MPPED2|744|metallophosphoesterase domain containing 2##AK314833|MPPED2|744|metallophosphoesterase domain containing 2##NM_001145399|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2##NM_001584|MPPED2|744|metallophosphoesterase domain containing 2##U57911|MPPED2|744|metallophosphoesterase domain containing 2##BX647348|DCDC5|100506627|doublecortin domain containing 5##NM_020869|DCDC5|100506627|doublecortin domain containing 5##AY247970|DCDC1|341019|doublecortin domain containing 1##NM_181807|DCDC1|341019|doublecortin domain containing 1##NM_181706|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK123087|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AL833128|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK289665|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC036571|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC044931|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC063804|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24	0.075848	
chr3	67040394	67040563	reg1019418.p1	7.239	+	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	-489014	-	AF381545 BC140907 NM_015541 AY730707	-489626	-	TSC_hg19_v1_chr3_+_66444897 AB075504	-595519	+	NM_032505 AK096640 AK300397	8250	+	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	664584	-	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	664672	+	AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit	0.870717	CTCF.p2:-42:0.871
chr6	125191903	125192054	reg1022325.p1	7.239	+	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	-1066774	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	-1233889	-	BC101377 BC101376 NM_001010852	-1874398	+	AK093417 AX748113 BC026087 NM_152553	112533	+	TSC_hg19_v1_chr6_+_125474909 NM_001003396 NM_001003397 NM_003287 AK291866 U44427 BC002375 AK291872 AF208012 AK291887	282961	+	AK124817 NM_001003395	283398	+	NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217##NM_001003396|TPD52L1|7164|tumor protein D52-like 1##NM_001003397|TPD52L1|7164|tumor protein D52-like 1##NM_003287|TPD52L1|7164|tumor protein D52-like 1##AK291866|TPD52L1|7164|tumor protein D52-like 1##U44427|TPD52L1|7164|tumor protein D52-like 1##BC002375|TPD52L1|7164|tumor protein D52-like 1##AK291872|TPD52L1|7164|tumor protein D52-like 1##AF208012|TPD52L1|7164|tumor protein D52-like 1##AK291887|TPD52L1|7164|tumor protein D52-like 1##AK124817|TPD52L1|7164|tumor protein D52-like 1##NM_001003395|TPD52L1|7164|tumor protein D52-like 1	0.069997	
chr6	126492151	126492278	reg1017984.p1	7.238	+	TSC_hg19_v1_chr6_+_126307685 AK308651	-184551	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	-184612	+	TSC_hg19_v1_chr6_+_126277915 NM_138571 BX647228 AK309857 BC015732 AK057688 AJ420577 AY035387 AY035388 AY486460 AY486461 DQ892201 DQ895396	-214229	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	169056	+	TSC_hg19_v1_chr6_+_127439818 BC022367	947597	+	NM_032784 AF251057	947837	+	AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_138571|HINT3|135114|histidine triad nucleotide binding protein 3##BX647228|HINT3|135114|histidine triad nucleotide binding protein 3##AK309857|HINT3|135114|histidine triad nucleotide binding protein 3##BC015732|HINT3|135114|histidine triad nucleotide binding protein 3##AK057688|HINT3|135114|histidine triad nucleotide binding protein 3##AJ420577|HINT3|135114|histidine triad nucleotide binding protein 3##AY035387|HINT3|135114|histidine triad nucleotide binding protein 3##AY035388|HINT3|135114|histidine triad nucleotide binding protein 3##AY486460|HINT3|135114|histidine triad nucleotide binding protein 3##AY486461|HINT3|135114|histidine triad nucleotide binding protein 3##DQ892201|HINT3|135114|histidine triad nucleotide binding protein 3##DQ895396|HINT3|135114|histidine triad nucleotide binding protein 3##BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##BC022367|RSPO3|84870|R-spondin 3##NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3	0.907882	CTCF.p2:4:0.908
chr11	14170354	14170475	reg1019296.p2	7.237	+	TSC_hg19_v1_chr11_+_13984277 NM_006108 AK291780 AK074803 BC136513 BC136563 BC006262 AB051390	-186131	+	AY423606 BC017377 TSC_hg19_v1_chr11_+_13690267 AY600449	-480147	+	TSC_hg19_v1_chr11_+_13690255 AK315527 AK026381	-480161	+	AK309550 AK309683 NM_001177315 NM_001102669	209637	-	TSC_hg19_v1_chr11_-_14380730 BC013106 AK299606 AK313976 NM_012250	210263	-	AK300103 NM_001177314	215637	-	NM_006108|SPON1|10418|spondin 1, extracellular matrix protein##AK291780|SPON1|10418|spondin 1, extracellular matrix protein##AK074803|SPON1|10418|spondin 1, extracellular matrix protein##BC136513|SPON1|10418|spondin 1, extracellular matrix protein##BC136563|SPON1|10418|spondin 1, extracellular matrix protein##AB051390|SPON1|10418|spondin 1, extracellular matrix protein##AY423606|FAR1|84188|fatty acyl CoA reductase 1##BC017377|FAR1|84188|fatty acyl CoA reductase 1##AY600449|FAR1|84188|fatty acyl CoA reductase 1##AK315527|FAR1|84188|fatty acyl CoA reductase 1##AK026381|FAR1|84188|fatty acyl CoA reductase 1##AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##BC013106|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK299606|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK313976|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_012250|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	0.819407	CTCF.p2:-10:0.819
chr1	162847923	162848051	reg1021141.p1	7.237	+	BC040018 AK123573 NM_178550	-9410	-	AK022929 AF145023 NM_016371 BC065246 AK290741 BC007068 AJ249179 AF098786 AY358962 BT007075 CU675533 CU688024 GQ129366 GQ129367	-87447	+	AK225063 TSC_hg19_v1_chr1_+_162602308	-245676	+	NM_001102445	190408	+	DQ346664 AK295540 NM_005613	190676	+	DQ346663 NM_001113381 AK093959 AK300832 DQ346662 AK312250 AK096204 BC051869 U27768 BC000737 AB528687 AF493928 BT007025	191117	+	BC040018|C1orf110|339512|chromosome 1 open reading frame 110##AK123573|C1orf110|339512|chromosome 1 open reading frame 110##NM_178550|C1orf110|339512|chromosome 1 open reading frame 110##AK022929|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF145023|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##NM_016371|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC065246|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AK290741|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC007068|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AJ249179|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF098786|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AY358962|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BT007075|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129366|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129367|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AK225063|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_001102445|RGS4|5999|regulator of G-protein signaling 4##DQ346664|RGS4|5999|regulator of G-protein signaling 4##AK295540|RGS4|5999|regulator of G-protein signaling 4##NM_005613|RGS4|5999|regulator of G-protein signaling 4##DQ346663|RGS4|5999|regulator of G-protein signaling 4##NM_001113381|RGS4|5999|regulator of G-protein signaling 4##AK093959|RGS4|5999|regulator of G-protein signaling 4##AK300832|RGS4|5999|regulator of G-protein signaling 4##DQ346662|RGS4|5999|regulator of G-protein signaling 4##AK312250|RGS4|5999|regulator of G-protein signaling 4##AK096204|RGS4|5999|regulator of G-protein signaling 4##BC051869|RGS4|5999|regulator of G-protein signaling 4##U27768|RGS4|5999|regulator of G-protein signaling 4##BC000737|RGS4|5999|regulator of G-protein signaling 4##AF493928|RGS4|5999|regulator of G-protein signaling 4##BT007025|RGS4|5999|regulator of G-protein signaling 4	0.0	
chr11	71949328	71949434	reg1019001.p1	7.237	+	Y14385 BC140853 NM_001567	-13529	+	NM_000803 NM_001113534 NM_001113535 NM_001113536 AK222539 AK222643 BC058036 BC027894 EU832652 EU832730	-21501	+	NM_016729 U78793 U78794 S73490 AB590148 DQ892744 DQ895990 BT007158 CR542019 M25317 M35069	-46152	+	BC041564 TSC_hg19_v1_chr11_-_71955201	5821	-	TSC_hg19_v1_chr11_-_71955221 AK290645 NM_005169	5854	-	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	196074	-	Y14385|INPPL1|3636|inositol polyphosphate phosphatase-like 1##BC140853|INPPL1|3636|inositol polyphosphate phosphatase-like 1##NM_001567|INPPL1|3636|inositol polyphosphate phosphatase-like 1##NM_000803|FOLR2|2350|folate receptor 2 (fetal)##NM_001113534|FOLR2|2350|folate receptor 2 (fetal)##NM_001113535|FOLR2|2350|folate receptor 2 (fetal)##NM_001113536|FOLR2|2350|folate receptor 2 (fetal)##AK222539|FOLR2|2350|folate receptor 2 (fetal)##AK222643|FOLR2|2350|folate receptor 2 (fetal)##BC058036|FOLR2|2350|folate receptor 2 (fetal)##BC027894|FOLR2|2350|folate receptor 2 (fetal)##EU832652|FOLR2|2350|folate receptor 2 (fetal)##EU832730|FOLR2|2350|folate receptor 2 (fetal)##NM_016729|FOLR1|2348|folate receptor 1 (adult)##U78793|FOLR1|2348|folate receptor 1 (adult)##U78794|FOLR1|2348|folate receptor 1 (adult)##S73490|FOLR1|2348|folate receptor 1 (adult)##DQ892744|FOLR1|2348|folate receptor 1 (adult)##DQ895990|FOLR1|2348|folate receptor 1 (adult)##BT007158|FOLR1|2348|folate receptor 1 (adult)##CR542019|FOLR1|2348|folate receptor 1 (adult)##M25317|FOLR1|2348|folate receptor 1 (adult)##M35069|FOLR1|2348|folate receptor 1 (adult)##BC041564|PHOX2A|401|paired-like homeobox 2a##AK290645|PHOX2A|401|paired-like homeobox 2a##NM_005169|PHOX2A|401|paired-like homeobox 2a##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)	0.405967	CTCF.p2:-11:0.406
chr12	52510470	52510593	reg1017199.p1	7.237	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	-46733	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	-46777	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	-65315	+	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	75213	-	BC117348 BC126393 BC038743 NM_001242696	94032	-	NM_005556 TSC_hg19_v1_chr12_+_52626966	116431	+	BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80##BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##NM_005556|KRT7|3855|keratin 7	1.002027	CTCF.p2:45:0.300	CTCF.p2:-57:0.703
chr3	11101318	11101447	reg1020851.p1	7.237	+	TSC_hg19_v1_chr3_+_11034439 BC057291 BC033904	-66920	+	NM_003042 TSC_hg19_v1_chr3_+_11034421	-66961	+	TSC_hg19_v1_chr3_+_10857912 AK312719 BC036083 NM_014229 S75989 AB527355	-243475	+	AK289412 NM_001098213	77396	+	NM_001098212 AK292157 AK312879	94832	+	TSC_hg19_v1_chr3_+_11267680 NM_001098211	166291	+	BC057291|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC033904|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##AK289412|HRH1|3269|histamine receptor H1##NM_001098213|HRH1|3269|histamine receptor H1##NM_001098212|HRH1|3269|histamine receptor H1##AK292157|HRH1|3269|histamine receptor H1##AK312879|HRH1|3269|histamine receptor H1##NM_001098211|HRH1|3269|histamine receptor H1	0.990538	CTCF.p2:19:0.200	CTCF.p2:-25:0.790
chr13	108829187	108829282	reg1019071.p1	7.236	+	NM_001080396	-309775	-	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	-1608749	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	-1641885	-	NM_002312 X83441	37895	-	AK292419 AK314844 BC037491 NM_206937	38641	-	TSC_hg19_v1_chr13_-_108870697 BX648833 NM_001098268	41463	-	NM_001080396|FAM155A|728215|family with sequence similarity 155, member A##BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##NM_002312|LIG4|3981|ligase IV, DNA, ATP-dependent##X83441|LIG4|3981|ligase IV, DNA, ATP-dependent##AK292419|LIG4|3981|ligase IV, DNA, ATP-dependent##AK314844|LIG4|3981|ligase IV, DNA, ATP-dependent##BC037491|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_206937|LIG4|3981|ligase IV, DNA, ATP-dependent##BX648833|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_001098268|LIG4|3981|ligase IV, DNA, ATP-dependent	0.965541	CTCF.p2:-10:0.966
chr6	7899400	7899506	reg1020031.p2	7.236	+	NM_001718 M60315 BC096084 BC096085 BC099624 BC099625 BC111763 BC112352 BC113018 BC113019 BC128031	-172403	+	TSC_hg19_v1_chr6_+_7726328 AK300628	-173061	+	TSC_hg19_v1_chr6_+_7590453 AL832462 NM_152551 AK292409 AK056796 BC054008 BC114631 BC114630 BC062458	-308994	+	TSC_hg19_v1_chr6_-_7910300 AK315598 NM_001145549	10876	-	TSC_hg19_v1_chr6_-_7911022 BC001199 AJ440721 AL833008 AY326464 AK075291 AK098089 AY358646 NM_030810	11589	-	TSC_hg19_v1_chr6_-_8064623 BC052310 AK025442 BC032438 CR749569 BX647336 BC119645 BC119644	165148	-	NM_001718|BMP6|654|bone morphogenetic protein 6##M60315|BMP6|654|bone morphogenetic protein 6##BC096084|BMP6|654|bone morphogenetic protein 6##BC096085|BMP6|654|bone morphogenetic protein 6##BC099624|BMP6|654|bone morphogenetic protein 6##BC099625|BMP6|654|bone morphogenetic protein 6##BC111763|BMP6|654|bone morphogenetic protein 6##BC112352|BMP6|654|bone morphogenetic protein 6##BC113018|BMP6|654|bone morphogenetic protein 6##BC113019|BMP6|654|bone morphogenetic protein 6##BC128031|BMP6|654|bone morphogenetic protein 6##AK300628|BMP6|654|bone morphogenetic protein 6##AL832462|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##NM_152551|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##AK292409|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##AK056796|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC054008|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC114631|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC114630|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC062458|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##AK315598|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##NM_001145549|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##BC001199|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AJ440721|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AL833008|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AY326464|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AK075291|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AK098089|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##AY358646|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##NM_030810|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##BC052310|MUTED-TXNDC5|100526836|MUTED-TXNDC5 readthrough (non-protein coding)##AK025442|MUTED|63915|muted homolog (mouse)##BC032438|MUTED|63915|muted homolog (mouse)##CR749569|MUTED|63915|muted homolog (mouse)##BX647336|MUTED|63915|muted homolog (mouse)##BC119645|MUTED|63915|muted homolog (mouse)##BC119644|MUTED|63915|muted homolog (mouse)	0.1171	
chr1	144811786	144811904	reg1017878.p1	7.235	+	AY894562 AY894567 AY894568 AY894572 AY894574 NM_001037675	-196887	+	TSC_hg19_v1_chr1_+_144593695 BX538005 AK308678	-218147	+	TSC_hg19_v1_chr1_-_144521169 AK090660 AX746564	-290616	-	CU687328 TSC_hg19_v1_chr1_-_144931874 BC078660	119966	-	BC132717 TSC_hg19_v1_chr1_-_144932057 BC004860 NM_001002811	120202	-	AL832024 AB042556 AL831815 TSC_hg19_v1_chr1_-_144994880	183016	-	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894567|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894568|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894572|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894574|NBPF9|400818|neuroblastoma breakpoint family, member 9##NM_001037675|NBPF9|400818|neuroblastoma breakpoint family, member 9##BX538005|NBPF10|100132406|neuroblastoma breakpoint family, member 10##AK090660|FAM91A2|57234|family with sequence similarity 91, member A2##BC078660|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC132717|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC004860|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001002811|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AL832024|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AL831815|PDE4DIP|9659|phosphodiesterase 4D interacting protein	0.968636	CTCF.p2:17:0.969
chr20	1193687	1193799	reg1019470.p2	7.235	+	AK092524 NM_001009612 BC127730 BC127731 BC141955 BC141956 BC150531 BC150532	-9611	+	AK002052 NM_018354	-28627	-	TSC_hg19_v1_chr20_+_1099244 NM_006814 AK098612 AK294134 D88378 AB590890 HQ258165 AK300667	-94390	+	BC157891 BC171911 NM_001136566	13020	+	BC035788 NM_014723 AB002372 AF187733	53235	+	AB464263 AJ292245 AF131809 NM_015685	100470	-	AK092524|C20orf202|400831|chromosome 20 open reading frame 202##NM_001009612|C20orf202|400831|chromosome 20 open reading frame 202##BC127730|C20orf202|400831|chromosome 20 open reading frame 202##BC127731|C20orf202|400831|chromosome 20 open reading frame 202##BC141955|C20orf202|400831|chromosome 20 open reading frame 202##BC141956|C20orf202|400831|chromosome 20 open reading frame 202##BC150532|C20orf202|400831|chromosome 20 open reading frame 202##AK002052|TMEM74B|55321|transmembrane protein 74B##NM_018354|TMEM74B|55321|transmembrane protein 74B##NM_006814|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK098612|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK294134|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##D88378|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##HQ258165|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK300667|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##BC157891|RAD21L1|642636|RAD21-like 1 (S. pombe)##BC171911|RAD21L1|642636|RAD21-like 1 (S. pombe)##NM_001136566|RAD21L1|642636|RAD21-like 1 (S. pombe)##BC035788|SNPH|9751|syntaphilin##NM_014723|SNPH|9751|syntaphilin##AB002372|SNPH|9751|syntaphilin##AF187733|SNPH|9751|syntaphilin##AJ292245|SDCBP2|27111|syndecan binding protein (syntenin) 2##AF131809|SDCBP2|27111|syndecan binding protein (syntenin) 2##NM_015685|SDCBP2|27111|syndecan binding protein (syntenin) 2	0.995284	CTCF.p2:10:0.995
chr21	9590268	9590419	reg1021082.p1	7.235	+	None	None	None	None	None	None	None	None	None	AK308254 AK314285 TSC_hg19_v1_chr21_-_10990898 AF007118 AF495908 AY219886 AY219887 AY219888 AL833345 BC028719 NM_199259 NM_199260 NM_199261	1400555	-	BC101132 BC101133 BC101134 BC107038 BC107039 BC113810 AF218570 AF339514 AF339515 AF339516 NM_181704 NM_182481 NM_182482 NM_182484 AF527550 AF527551 AF527553 NM_001187 U19180 BC017024 TSC_hg19_v1_chr21_-_11098961 AK292540 BC064647	1508556	-	AY172978 NM_174981 AY465173	5392156	+	AK308254|TPTE|7179|transmembrane phosphatase with tensin homology##AK314285|TPTE|7179|transmembrane phosphatase with tensin homology##AF007118|TPTE|7179|transmembrane phosphatase with tensin homology##AF495908|TPTE|7179|transmembrane phosphatase with tensin homology##AY219886|TPTE|7179|transmembrane phosphatase with tensin homology##AY219887|TPTE|7179|transmembrane phosphatase with tensin homology##AY219888|TPTE|7179|transmembrane phosphatase with tensin homology##AL833345|TPTE|7179|transmembrane phosphatase with tensin homology##BC028719|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199259|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199260|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199261|TPTE|7179|transmembrane phosphatase with tensin homology##BC101132|BAGE2|85319|B melanoma antigen family, member 2##BC101133|BAGE2|85319|B melanoma antigen family, member 2##BC101134|BAGE3|85318|B melanoma antigen family, member 3##BC107038|BAGE|574|B melanoma antigen##BC107039|BAGE|574|B melanoma antigen##BC113810|BAGE|574|B melanoma antigen##AF218570|BAGE2|85319|B melanoma antigen family, member 2##AF339514|BAGE3|85318|B melanoma antigen family, member 3##AF339515|BAGE4|85317|B melanoma antigen family, member 4##AF339516|BAGE5|85316|B melanoma antigen family, member 5##NM_181704|BAGE4|85317|B melanoma antigen family, member 4##NM_182481|BAGE3|85318|B melanoma antigen family, member 3##NM_182482|BAGE2|85319|B melanoma antigen family, member 2##NM_182484|BAGE5|85316|B melanoma antigen family, member 5##AF527550|BAGE|574|B melanoma antigen##AF527551|BAGE|574|B melanoma antigen##AF527553|BAGE|574|B melanoma antigen##NM_001187|BAGE|574|B melanoma antigen##U19180|BAGE|574|B melanoma antigen##AK292540|BAGE2|85319|B melanoma antigen family, member 2##AY172978|POTED|317754|POTE ankyrin domain family, member D##NM_174981|POTED|317754|POTE ankyrin domain family, member D##AY465173|POTEB|339010|POTE ankyrin domain family, member B	0.966339	CTCF.p2:-16:0.966
chr22	22339420	22339524	reg1017095.p1	7.235	+	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	-2286	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	-2325	-	TSC_hg19_v1_chr22_-_22307213 AK291628 NM_014634	-32241	-	TSC_hg19_v1_chr22_+_22385369 AF026922	45893	+	X02422 TSC_hg19_v1_chr22_+_22550141	210657	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	210706	+	AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##AK291628|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##NM_014634|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57	0.965909	CTCF.p2:-26:0.966
chr8	30458390	30458495	reg1018340.p2	7.235	+	NM_001008710 NM_001008711 NM_001008712 NM_006867 AK304858 D84107 D84108 D84109 D84110 TSC_hg19_v1_chr8_+_30242056 BC003608	-216433	+	Z36874 TSC_hg19_v1_chr8_+_30209759	-248705	+	D84145 NM_006571 TSC_hg19_v1_chr8_+_30013882 AK314128 BC013175 CR456851	-444587	+	NM_001206847	37674	+	S67861 TSC_hg19_v1_chr8_-_30515718 X63469 BC030572 BC001775 NM_002095	57294	-	BC035691 TSC_hg19_v1_chr8_-_30585320 X15722 AB519179 AB519180 AB519181 AF228704 CU686724	126844	-	NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing##NM_006867|RBPMS|11030|RNA binding protein with multiple splicing##AK304858|RBPMS|11030|RNA binding protein with multiple splicing##D84107|RBPMS|11030|RNA binding protein with multiple splicing##D84108|RBPMS|11030|RNA binding protein with multiple splicing##D84109|RBPMS|11030|RNA binding protein with multiple splicing##D84110|RBPMS|11030|RNA binding protein with multiple splicing##BC003608|RBPMS|11030|RNA binding protein with multiple splicing##D84145|DCTN6|10671|dynactin 6##NM_006571|DCTN6|10671|dynactin 6##AK314128|DCTN6|10671|dynactin 6##BC013175|DCTN6|10671|dynactin 6##CR456851|DCTN6|10671|dynactin 6##NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341##S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC035691|GSR|2936|glutathione reductase##X15722|GSR|2936|glutathione reductase##AB519179|GSR|2936|glutathione reductase##AB519180|GSR|2936|glutathione reductase##AB519181|GSR|2936|glutathione reductase##AF228704|GSR|2936|glutathione reductase	0.961071	CTCF.p2:-1:0.961
chr10	15921146	15921272	reg1020541.p2	7.234	+	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	-18718	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	-159416	-	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	-508060	-	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	557776	+	NM_001010908	642794	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	938150	-	BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related##NM_001010908|C1QL3|389941|complement component 1, q subcomponent-like 3##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1	0.096696	
chr11	67374322	67374427	reg1018995.p1	7.234	+	TSC_hg19_v1_chr11_+_67351285 AY887902 BC010915 BC044846 X15480 U62589 U30897	-23085	+	NM_000852 TSC_hg19_v1_chr11_+_67351145	-23268	+	AB528802 AF169154 BC018476 NM_016366	-83526	-	NM_001166102 NM_007103 TSC_hg19_v1_chr11_+_67374428 AF092131 AF053070 BC008146 AK310537 AK223061 AK293522 AK300726 BC015645 AB590249 CR456739 CU677379 CU678877 DQ893236 DQ896566 AK316122	27	+	BC007619 TSC_hg19_v1_chr11_+_67377037	2607	+	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	23029	-	BC010915|GSTP1|2950|glutathione S-transferase pi 1##BC044846|GSTP1|2950|glutathione S-transferase pi 1##X15480|GSTP1|2950|glutathione S-transferase pi 1##U62589|GSTP1|2950|glutathione S-transferase pi 1##U30897|GSTP1|2950|glutathione S-transferase pi 1##NM_000852|GSTP1|2950|glutathione S-transferase pi 1##AF169154|CABP2|51475|calcium binding protein 2##BC018476|CABP2|51475|calcium binding protein 2##NM_016366|CABP2|51475|calcium binding protein 2##NM_001166102|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_007103|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF092131|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF053070|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC008146|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK310537|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK223061|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK293522|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK300726|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC015645|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##CR456739|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ893236|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ896566|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK316122|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC007619|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8	0.172399	
chr1	197488956	197489081	reg1017931.p1	7.234	+	NM_001193640 NM_201253 AK299368 AK289733 AK307844 AB208923 AF154671 AY043324 AY043325 BC136271 BC143726 AJ748821	-251581	+	BC132818 BC136600 AK128549 AY163816 NM_194314	-319365	-	AF509326 AY099892 AY367065 AY971955 AY971956 AY971957 BC015396 TSC_hg19_v1_chr1_-_197115800 AK226178 AK125107 NM_001206846 NM_018136	-373324	-	AK000061 TSC_hg19_v1_chr1_-_197552357	63314	-	TSC_hg19_v1_chr1_-_197744376 BC022561	255316	-	TSC_hg19_v1_chr1_-_197744396 BC063456	255378	-	NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)##NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)##AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)##AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)##AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)##AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)##AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)##BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)##BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)##AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)##BC132818|ZBTB41|360023|zinc finger and BTB domain containing 41##BC136600|ZBTB41|360023|zinc finger and BTB domain containing 41##AK128549|ZBTB41|360023|zinc finger and BTB domain containing 41##AY163816|ZBTB41|360023|zinc finger and BTB domain containing 41##NM_194314|ZBTB41|360023|zinc finger and BTB domain containing 41##AF509326|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY099892|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY367065|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971955|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971956|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971957|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##BC015396|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK226178|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK125107|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_001206846|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_018136|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK000061|DENND1B|163486|DENN/MADD domain containing 1B##BC022561|DENND1B|163486|DENN/MADD domain containing 1B##BC063456|DENND1B|163486|DENN/MADD domain containing 1B	0.912405	CTCF.p2:14:0.912
chr1	214562123	214562245	reg1018656.p1	7.234	+	TSC_hg19_v1_chr1_+_214454550 BC068511 BC049367 BC094747 BC057793 NM_020197 AF226053 BC098133 BC098276 BC098305 BC098335 BC028104 AK313868 AB590916 BC039890	-107747	+	BC024201 NM_002763	-400325	+	AK298182 TSC_hg19_v1_chr1_+_214161296 U44060	-400895	+	X82676 TSC_hg19_v1_chr1_-_214724620 BC017300 AK090596	162423	-	TSC_hg19_v1_chr1_-_214724946 AK298120 BX538306 AK291641	162715	-	TSC_hg19_v1_chr1_-_214724977 NM_005401	162814	-	BC068511|SMYD2|56950|SET and MYND domain containing 2##BC049367|SMYD2|56950|SET and MYND domain containing 2##BC094747|SMYD2|56950|SET and MYND domain containing 2##BC057793|SMYD2|56950|SET and MYND domain containing 2##NM_020197|SMYD2|56950|SET and MYND domain containing 2##AF226053|SMYD2|56950|SET and MYND domain containing 2##BC098133|SMYD2|56950|SET and MYND domain containing 2##BC098276|SMYD2|56950|SET and MYND domain containing 2##BC098305|SMYD2|56950|SET and MYND domain containing 2##BC098335|SMYD2|56950|SET and MYND domain containing 2##BC028104|SMYD2|56950|SET and MYND domain containing 2##AK313868|SMYD2|56950|SET and MYND domain containing 2##BC039890|SMYD2|56950|SET and MYND domain containing 2##BC024201|PROX1|5629|prospero homeobox 1##NM_002763|PROX1|5629|prospero homeobox 1##AK298182|PROX1|5629|prospero homeobox 1##U44060|PROX1|5629|prospero homeobox 1##X82676|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##BC017300|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK090596|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK298120|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK291641|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##NM_005401|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14	0.523584	CTCF.p2:-40:0.524
chr6	30845611	30845733	reg1019076.p2	7.234	+	AF039067 BT006703 AB591006 AF083421 Y14551 BC000844 BC005080 S81914 TSC_hg19_v1_chr6_-_30712325 AK222588 AK314162 NM_003897	-133361	-	TSC_hg19_v1_chr6_-_30710463 AF085357 AF089750 AF117234 NM_005803 AK301291 AK000816 AK222530	-135224	-	BC001896 TSC_hg19_v1_chr6_+_30691264 DQ457058 BC029323 BC015889	-154411	+	AK291621 TSC_hg19_v1_chr6_+_30850729	5041	+	BC008716 BC013400 NM_001954	6188	+	NM_013993 L20817 L57508 TSC_hg19_v1_chr6_+_30852354 BC070070 AB210021 L11315	6713	+	AF039067|IER3|8870|immediate early response 3##BT006703|IER3|8870|immediate early response 3##AF083421|IER3|8870|immediate early response 3##Y14551|IER3|8870|immediate early response 3##BC000844|IER3|8870|immediate early response 3##BC005080|IER3|8870|immediate early response 3##S81914|IER3|8870|immediate early response 3##AK222588|IER3|8870|immediate early response 3##AK314162|IER3|8870|immediate early response 3##NM_003897|IER3|8870|immediate early response 3##AF085357|FLOT1|10211|flotillin 1##AF089750|FLOT1|10211|flotillin 1##AF117234|FLOT1|10211|flotillin 1##NM_005803|FLOT1|10211|flotillin 1##AK301291|FLOT1|10211|flotillin 1##AK000816|FLOT1|10211|flotillin 1##AK222530|FLOT1|10211|flotillin 1##BC001896|TUBB|203068|tubulin, beta class I##DQ457058|TUBB|203068|tubulin, beta class I##BC029323|TUBB|203068|tubulin, beta class I##BC015889|TUBB|203068|tubulin, beta class I##AK291621|DDR1|780|discoidin domain receptor tyrosine kinase 1##BC008716|DDR1|780|discoidin domain receptor tyrosine kinase 1##BC013400|DDR1|780|discoidin domain receptor tyrosine kinase 1##NM_001954|DDR1|780|discoidin domain receptor tyrosine kinase 1##NM_013993|DDR1|780|discoidin domain receptor tyrosine kinase 1##L20817|DDR1|780|discoidin domain receptor tyrosine kinase 1##L57508|DDR1|780|discoidin domain receptor tyrosine kinase 1##BC070070|DDR1|780|discoidin domain receptor tyrosine kinase 1##AB210021|DDR1|780|discoidin domain receptor tyrosine kinase 1##L11315|DDR1|780|discoidin domain receptor tyrosine kinase 1	0.669371	CTCF.p2:0:0.669
chr6_cox_hap2	4105577	4105708	reg1019728.p1	7.234	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.442633	CTCF.p2:9:0.443
chr7	147839867	147840001	reg1021985.p1	7.234	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-2026050	+	NM_014141	-2026482	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-3306798	-	TSC_hg19_v1_chr7_+_148036552 CR933671	196631	+	BC021251 NM_145304	447722	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	556006	+	AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##CR933671|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1	0.99843	CTCF.p2:2:0.998
chrX	36926967	36927108	reg1021204.p1	7.234	+	NM_001098843	-672987	+	AK093920 AX748365 NM_173695	-861985	+	NM_152632 AK126295 BC027936 CU693328	-989155	+	NM_001013736	99394	+	NM_000950 NM_001142395 NM_001173486 BC030786 TSC_hg19_v1_chrX_+_37208616 BC012608 NM_001173489 NM_001173490 AK312904 BC060833 AF009242 BC041591	281551	+	AK124915 NM_001170331 NM_198511 TSC_hg19_v1_chrX_+_37430917	503833	+	NM_001098843|CXorf30|645090|chromosome X open reading frame 30##AK093920|CXorf59|286464|chromosome X open reading frame 59##NM_173695|CXorf59|286464|chromosome X open reading frame 59##NM_152632|CXorf22|170063|chromosome X open reading frame 22##AK126295|CXorf22|170063|chromosome X open reading frame 22##BC027936|CXorf22|170063|chromosome X open reading frame 22##NM_001013736|FAM47C|442444|family with sequence similarity 47, member C##NM_000950|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001142395|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173486|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC030786|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC012608|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173489|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173490|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AK312904|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC060833|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AF009242|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC041591|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AK124915|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_001170331|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_198511|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)	1.34577	CTCF.p2:34:0.960	CTCF.p2:-45:0.386
chr10	113516354	113516470	reg1019674.p2	7.233	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	-679560	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-837032	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-837052	+	AB046780 TSC_hg19_v1_chr10_-_113933602	417149	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	427093	-	BC113497 BC113499 AF312827 HQ258194 NM_058222	527040	+	NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta	0.64082	CTCF.p2:-9:0.641
chr10	21367752	21367846	reg1018915.p1	7.233	+	NM_006393 Y16241	-181269	-	TSC_hg19_v1_chr10_+_20105360 AK304591 AY358486 NM_032812	-1262426	+	TSC_hg19_v1_chr10_+_18948359 NM_178815 BC024163 AK027275 AF494061 DQ893166 DQ896464	-2419378	+	BC140744 BC144447 NM_001010896 NM_001177483	67688	-	AB209311 TSC_hg19_v1_chr10_-_21462987	95188	-	TSC_hg19_v1_chr10_-_21463021 BC126132 BC126134 BC144201 AJ580772 NM_001173484 NM_213569	95268	-	NM_006393|NEBL|10529|nebulette##Y16241|NEBL|10529|nebulette##AK304591|PLXDC2|84898|plexin domain containing 2##AY358486|PLXDC2|84898|plexin domain containing 2##NM_032812|PLXDC2|84898|plexin domain containing 2##NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B##BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B##AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B##AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113##AB209311|NEBL|10529|nebulette##BC126132|NEBL|10529|nebulette##BC126134|NEBL|10529|nebulette##BC144201|NEBL|10529|nebulette##AJ580772|NEBL|10529|nebulette##NM_001173484|NEBL|10529|nebulette##NM_213569|NEBL|10529|nebulette	0.979752	CTCF.p2:-4:0.944
chr10	70108317	70108440	reg1019617.p1	7.233	+	AK027673 BC009738 NM_001033083 NM_022129	-15713	-	NM_012207 NM_021644 AK223441 AK291547 TSC_hg19_v1_chr10_+_70091820 BC039824 AX810704 AK295316 AF132361	-16556	+	AK312275 AB528615 TSC_hg19_v1_chr10_-_70066624 AK092826 AX747753	-41764	-	TSC_hg19_v1_chr10_-_70167035 AK127019 NM_017987 BC062660 AY528716 BC041092 AK000925 AK294211 NM_001042417	58607	-	BC063664 TSC_hg19_v1_chr10_-_70231687 D42046 AK307939	123303	-	AK308333 NM_001080449 TSC_hg19_v1_chr10_-_70231752 BC111740	123425	-	AK027673|PBLD|64081|phenazine biosynthesis-like protein domain containing##BC009738|PBLD|64081|phenazine biosynthesis-like protein domain containing##NM_001033083|PBLD|64081|phenazine biosynthesis-like protein domain containing##NM_022129|PBLD|64081|phenazine biosynthesis-like protein domain containing##NM_012207|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##NM_021644|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK223441|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK291547|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##BC039824|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK295316|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AF132361|HNRNPH3|3189|heterogeneous nuclear ribonucleoprotein H3 (2H9)##AK312275|PBLD|64081|phenazine biosynthesis-like protein domain containing##AK092826|PBLD|64081|phenazine biosynthesis-like protein domain containing##AK127019|RUFY2|55680|RUN and FYVE domain containing 2##NM_017987|RUFY2|55680|RUN and FYVE domain containing 2##BC062660|RUFY2|55680|RUN and FYVE domain containing 2##AY528716|RUFY2|55680|RUN and FYVE domain containing 2##BC041092|RUFY2|55680|RUN and FYVE domain containing 2##AK294211|RUFY2|55680|RUN and FYVE domain containing 2##NM_001042417|RUFY2|55680|RUN and FYVE domain containing 2##BC063664|DNA2|1763|DNA replication helicase 2 homolog (yeast)##D42046|DNA2|1763|DNA replication helicase 2 homolog (yeast)##AK307939|DNA2|1763|DNA replication helicase 2 homolog (yeast)##AK308333|DNA2|1763|DNA replication helicase 2 homolog (yeast)##NM_001080449|DNA2|1763|DNA replication helicase 2 homolog (yeast)##BC111740|DNA2|1763|DNA replication helicase 2 homolog (yeast)	0.917015	CTCF.p2:3:0.917
chr14	51421653	51421768	reg1020072.p1	7.233	+	AF046785 AF066858 TSC_hg19_v1_chr14_-_51411202 AK313206 Y15233 AK309333 BC065011 BC110791 BC009895 BC082229 AK225904 AK300580 BC095850 M14636 NM_001163940 NM_002863	-10528	-	AY311396 AY311397 AY311398 AY311399 BC107141 NM_001206673 NM_181814 BC107142 AK128464	-82832	+	AB046785 TSC_hg19_v1_chr14_-_51297860 BC065521 AF223937 AF223938 AF223939 AF302773 AY736182 NM_016350 NM_020921 NM_182944 NM_182946	-123890	-	CU680598 TSC_hg19_v1_chr14_-_51561792 BC013414 D87458	140067	-	TSC_hg19_v1_chr14_-_51562045 AK055388	140343	-	NM_015163 NM_052978	140711	-	AF046785|PYGL|5836|phosphorylase, glycogen, liver##AF066858|PYGL|5836|phosphorylase, glycogen, liver##AK313206|PYGL|5836|phosphorylase, glycogen, liver##Y15233|PYGL|5836|phosphorylase, glycogen, liver##AK309333|PYGL|5836|phosphorylase, glycogen, liver##BC065011|PYGL|5836|phosphorylase, glycogen, liver##BC110791|PYGL|5836|phosphorylase, glycogen, liver##BC009895|PYGL|5836|phosphorylase, glycogen, liver##BC082229|PYGL|5836|phosphorylase, glycogen, liver##AK225904|PYGL|5836|phosphorylase, glycogen, liver##AK300580|PYGL|5836|phosphorylase, glycogen, liver##BC095850|PYGL|5836|phosphorylase, glycogen, liver##M14636|PYGL|5836|phosphorylase, glycogen, liver##NM_001163940|PYGL|5836|phosphorylase, glycogen, liver##NM_002863|PYGL|5836|phosphorylase, glycogen, liver##AY311396|ABHD12B|145447|abhydrolase domain containing 12B##AY311397|ABHD12B|145447|abhydrolase domain containing 12B##AY311398|ABHD12B|145447|abhydrolase domain containing 12B##AY311399|ABHD12B|145447|abhydrolase domain containing 12B##BC107141|ABHD12B|145447|abhydrolase domain containing 12B##NM_001206673|ABHD12B|145447|abhydrolase domain containing 12B##NM_181814|ABHD12B|145447|abhydrolase domain containing 12B##BC107142|ABHD12B|145447|abhydrolase domain containing 12B##AK128464|ABHD12B|145447|abhydrolase domain containing 12B##AB046785|NIN|51199|ninein (GSK3B interacting protein)##BC065521|NIN|51199|ninein (GSK3B interacting protein)##AF223937|NIN|51199|ninein (GSK3B interacting protein)##AF223938|NIN|51199|ninein (GSK3B interacting protein)##AF223939|NIN|51199|ninein (GSK3B interacting protein)##AF302773|NIN|51199|ninein (GSK3B interacting protein)##AY736182|NIN|51199|ninein (GSK3B interacting protein)##NM_016350|NIN|51199|ninein (GSK3B interacting protein)##NM_020921|NIN|51199|ninein (GSK3B interacting protein)##NM_182944|NIN|51199|ninein (GSK3B interacting protein)##NM_182946|NIN|51199|ninein (GSK3B interacting protein)##BC013414|TRIM9|114088|tripartite motif containing 9##D87458|TRIM9|114088|tripartite motif containing 9##AK055388|TRIM9|114088|tripartite motif containing 9##NM_015163|TRIM9|114088|tripartite motif containing 9##NM_052978|TRIM9|114088|tripartite motif containing 9	0.937238	CTCF.p2:1:0.937
chr20	62670018	62670119	reg1011331.p2	7.233	+	TSC_hg19_v1_chr20_+_62612576 AB527848	-57482	+	AF221842 TSC_hg19_v1_chr20_+_62612506 AF026031 AK314310 AB019219 BC001666	-57537	+	TSC_hg19_v1_chr20_+_62612487 AK225993 AK001554	-57591	+	AJ243896 AF270652 BC111390 NM_018419 BC035513 BC038590 BC073971 TSC_hg19_v1_chr20_-_62680993 AB033888	10870	-	NM_198723	18370	+	NM_003195	23941	+	AF221842|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF026031|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK314310|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AB019219|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##BC001666|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK225993|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK001554|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AJ243896|SOX18|54345|SRY (sex determining region Y)-box 18##AF270652|SOX18|54345|SRY (sex determining region Y)-box 18##BC111390|SOX18|54345|SRY (sex determining region Y)-box 18##NM_018419|SOX18|54345|SRY (sex determining region Y)-box 18##BC035513|SOX18|54345|SRY (sex determining region Y)-box 18##BC038590|SOX18|54345|SRY (sex determining region Y)-box 18##BC073971|SOX18|54345|SRY (sex determining region Y)-box 18##AB033888|SOX18|54345|SRY (sex determining region Y)-box 18##NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2	0.982353	CTCF.p2:-6:0.982
chr5	133863349	133863473	reg1019803.p2	7.233	+	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	-1606	+	TSC_hg19_v1_chr5_+_133861359 AK056471 BC021962 AK292635 AK074123	-2048	+	TSC_hg19_v1_chr5_+_133842276 BC032795	-21121	+	BC002847 TSC_hg19_v1_chr5_-_133968519 AK223452 AF092130 BC093034 NM_001033503 NM_016103	105086	-	TSC_hg19_v1_chr5_+_133984493 AK304060 NM_001252231 NM_021982 BC019341	121020	+	TSC_hg19_v1_chr5_+_134074237 NM_001745 BC130325 AK313156 BC063532 U18242 AB590695 HQ258172 AF068179	210899	+	D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15##AK056471|PHF15|23338|PHD finger protein 15##BC021962|PHF15|23338|PHD finger protein 15##AK292635|PHF15|23338|PHD finger protein 15##AK074123|PHF15|23338|PHD finger protein 15##BC002847|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK223452|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AF092130|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##BC093034|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_001033503|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_016103|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001252231|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001745|CAMLG|819|calcium modulating ligand##BC130325|CAMLG|819|calcium modulating ligand##AK313156|CAMLG|819|calcium modulating ligand##BC063532|CAMLG|819|calcium modulating ligand##U18242|CAMLG|819|calcium modulating ligand##HQ258172|CAMLG|819|calcium modulating ligand##AF068179|CAMLG|819|calcium modulating ligand	0.0	
chr8	29270986	29271124	reg1019495.p1	7.233	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-62985	-	AL137704 NM_057158	-64734	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-150441	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	669419	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	669517	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	681888	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chr8	95003652	95003817	reg1018120.p1	7.233	+	NM_001161778 AB590483 TSC_hg19_v1_chr8_+_94930074 AK302651	-73699	+	NM_018444 TSC_hg19_v1_chr8_+_94929171 BC047619 NM_001161780 AK057079 NM_001161779 BC064978 AF155661 NM_001161781	-74554	+	AK308071 NM_001142301 NM_153704 AK092244 AX747428 TSC_hg19_v1_chr8_+_94767121 AK308735 BX648768 BC031220 BC017974 BC054338 AK094935 BC032835	-236620	+	U07969 BC112013 BC113464 TSC_hg19_v1_chr8_-_95220784 X83228 AK301001 NM_004063	217060	-	AK312873 NM_001144663	225796	-	U10550 TSC_hg19_v1_chr8_-_95274525	270788	-	NM_001161778|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK302651|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_018444|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC047619|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161780|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK057079|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161779|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC064978|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AF155661|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161781|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK308071|TMEM67|91147|transmembrane protein 67##NM_001142301|TMEM67|91147|transmembrane protein 67##NM_153704|TMEM67|91147|transmembrane protein 67##AK092244|TMEM67|91147|transmembrane protein 67##AK308735|TMEM67|91147|transmembrane protein 67##BX648768|TMEM67|91147|transmembrane protein 67##BC031220|TMEM67|91147|transmembrane protein 67##BC017974|TMEM67|91147|transmembrane protein 67##BC054338|TMEM67|91147|transmembrane protein 67##AK094935|TMEM67|91147|transmembrane protein 67##BC032835|TMEM67|91147|transmembrane protein 67##U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle	0.143652	
chr4	2537127	2537273	reg1017009.p1	7.232	+	NM_001185009 BC031935	-66020	+	TSC_hg19_v1_chr4_+_2470846 AK312534 AK309509 U95140	-66324	+	TSC_hg19_v1_chr4_+_2470845 AB000468	-66356	+	AB000459 AB000460 AB000461 NM_003704 BC136646 BC144337 BC144339 BC144340	89973	+	AK026176 NM_001161527	220550	-	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	220863	-	NM_001185009|RNF4|6047|ring finger protein 4##BC031935|RNF4|6047|ring finger protein 4##AK312534|RNF4|6047|ring finger protein 4##AK309509|RNF4|6047|ring finger protein 4##U95140|RNF4|6047|ring finger protein 4##AB000468|RNF4|6047|ring finger protein 4##AB000459|FAM193A|8603|family with sequence similarity 193, member A##AB000460|FAM193A|8603|family with sequence similarity 193, member A##AB000461|FAM193A|8603|family with sequence similarity 193, member A##NM_003704|FAM193A|8603|family with sequence similarity 193, member A##BC136646|FAM193A|8603|family with sequence similarity 193, member A##BC144337|FAM193A|8603|family with sequence similarity 193, member A##BC144339|FAM193A|8603|family with sequence similarity 193, member A##BC144340|FAM193A|8603|family with sequence similarity 193, member A##AK026176|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001161527|TNIP2|79155|TNFAIP3 interacting protein 2##AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2	0.913808	CTCF.p2:75:0.914
chr6	20056754	20056870	reg1021442.p1	7.232	+	TSC_hg19_v1_chr6_+_19838612 AF085889	-218129	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	-219177	+	AK096832 NM_182757 AB076367 BC063311 AL832329	-1669145	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	155860	-	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	345291	+	CR749285 NM_001243076	347221	+	BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3	0.9948	CTCF.p2:4:0.995
chr9	41866258	41866369	reg1018542.p1	7.232	+	BC040528 NM_001113541 NM_015667	-365635	+	BC040528 NM_001113541 NM_015667 NM_001242613	-538934	-	AK057375 AK292150 NM_033160	-1074227	-	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	88601	-	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	502045	+	NM_001099279 NM_199244	850920	+	BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##AK057375|ZNF658|26149|zinc finger protein 658##AK292150|ZNF658|26149|zinc finger protein 658##NM_033160|ZNF658|26149|zinc finger protein 658##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.172335	
chr2	192435942	192436079	reg1019601.p1	7.231	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-325912	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-419703	-	TSC_hg19_v1_chr2_-_192015965 NM_003151	-420051	-	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	106852	+	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	275728	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	275961	-	NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##NM_003151|STAT4|6775|signal transducer and activator of transcription 4##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response	0.97333	CTCF.p2:2:0.973
chr7	140920222	140920324	reg1018694.p1	7.231	+	NM_001195278	-146242	+	NM_053035 TSC_hg19_v1_chr7_-_140714792	-205487	-	TSC_hg19_v1_chr7_-_140714748 AF078858 BC105793	-205523	-	NM_018238 TSC_hg19_v1_chr7_+_141251215 AK304502 AK001704 AK299131 AK222769 AJ278150 BC009775	330884	+	TSC_hg19_v1_chr7_-_141401967 AB032973 NM_001080392 AB384573	481661	-	AK131218 NM_001105558	487879	+	NM_001195278|LOC100507421|100507421|transmembrane protein 178-like##NM_053035|MRPS33|51650|mitochondrial ribosomal protein S33##AF078858|MRPS33|51650|mitochondrial ribosomal protein S33##BC105793|MRPS33|51650|mitochondrial ribosomal protein S33##NM_018238|AGK|55750|acylglycerol kinase##AK304502|AGK|55750|acylglycerol kinase##AK001704|AGK|55750|acylglycerol kinase##AK299131|AGK|55750|acylglycerol kinase##AK222769|AGK|55750|acylglycerol kinase##AJ278150|AGK|55750|acylglycerol kinase##BC009775|AGK|55750|acylglycerol kinase##AB032973|KIAA1147|57189|KIAA1147##NM_001080392|KIAA1147|57189|KIAA1147##AK131218|WEE2|494551|WEE1 homolog 2 (S. pombe)##NM_001105558|WEE2|494551|WEE1 homolog 2 (S. pombe)	0.0	
chr1	192579378	192579475	reg1018157.p1	7.230	+	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	-34518	+	AY643711 NM_001039152	-293305	+	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	-451823	+	NM_002927 NM_144766 AF030107 BC016667	25858	+	BC042755 BC044742 NM_002923 TSC_hg19_v1_chr1_+_192778168 AK313668 BC007049 L13463 AY971351 AB528517 AF493926 BT007065 CR457410 CU675517 DQ893178 DQ896478	198758	+	BT006790 CU692976 AB528990 AF151828 AK225794 BC015521 TSC_hg19_v1_chr1_-_193028470 AK314445 AK316064 AK024751	449011	-	NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##NM_002927|RGS13|6003|regulator of G-protein signaling 13##NM_144766|RGS13|6003|regulator of G-protein signaling 13##AF030107|RGS13|6003|regulator of G-protein signaling 13##BC016667|RGS13|6003|regulator of G-protein signaling 13##BC042755|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC044742|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002923|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AK313668|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC007049|RGS2|5997|regulator of G-protein signaling 2, 24kDa##L13463|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AY971351|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AF493926|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT007065|RGS2|5997|regulator of G-protein signaling 2, 24kDa##CR457410|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ893178|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ896478|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT006790|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AF151828|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK225794|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##BC015521|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK314445|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK316064|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK024751|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5	0.846408	CTCF.p2:9:0.846
chr16	28751221	28751367	reg1020380.p1	7.230	+	BC157849 AB527254 DQ891632 DQ894822 TSC_hg19_v1_chr16_+_28723065	-28272	+	BC107692 NM_001037808 NM_003752 TSC_hg19_v1_chr16_+_28722786 AK301183 NM_001099661 AK301233 AK304500 AK055366 AK299421 AK303790 BC001571 BC000533 AY762099 AK293264 AK000739 BC071705	-28475	+	AK292155 NM_001199142 BC157842	-51361	+	TSC_hg19_v1_chr16_+_28834364 AK289981	83071	+	TSC_hg19_v1_chr16_+_28834372 BC068012	83094	+	TSC_hg19_v1_chr16_+_28834434 AJ317970 AJ317971 AJ317972 AJ317973 AJ317974 NM_007245 NM_145714 NM_148414 NM_148415 NM_148416 BC136584 BC144269	83132	+	BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK289981|ATXN2L|11273|ataxin 2-like##BC068012|ATXN2L|11273|ataxin 2-like##AJ317970|ATXN2L|11273|ataxin 2-like##AJ317971|ATXN2L|11273|ataxin 2-like##AJ317972|ATXN2L|11273|ataxin 2-like##AJ317973|ATXN2L|11273|ataxin 2-like##AJ317974|ATXN2L|11273|ataxin 2-like##NM_007245|ATXN2L|11273|ataxin 2-like##NM_145714|ATXN2L|11273|ataxin 2-like##NM_148414|ATXN2L|11273|ataxin 2-like##NM_148415|ATXN2L|11273|ataxin 2-like##NM_148416|ATXN2L|11273|ataxin 2-like##BC136584|ATXN2L|11273|ataxin 2-like##BC144269|ATXN2L|11273|ataxin 2-like	0.0	
chr18	59218851	59219000	reg1021416.p1	7.230	+	AF217289 BC101047 BC101048 BC101049 NM_031891	-61151	+	AK314130 NM_005912	-1178925	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-1651696	+	AK096495 NM_173557	341378	-	AF109219 TSC_hg19_v1_chr18_-_59854208	635269	-	TSC_hg19_v1_chr18_-_59854227 BC028363	635296	-	AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##BC028363|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.131521	
chr20	29848236	29848366	reg1018988.p1	7.230	+	DQ012019 NM_001037730	-2835	+	TSC_hg19_v1_chr20_+_29611882 BC062724 BC062743 AK307061 BC095491 AK057099	-236376	+	TSC_hg19_v1_chr20_-_26189755 BC036544	-3658490	-	DQ012020 NM_001037731	48086	-	BC035677 NM_054112 AF347073 BC117378 HQ258709 AF529415	108135	+	AF479698 AF479699 AY122473 AY501001 AY358860 BC062212 AY122472 NM_153289 NM_153323 NM_173460	130044	-	DQ012019|DEFB115|245929|defensin, beta 115##NM_001037730|DEFB115|245929|defensin, beta 115##BC062724|FRG1B|284802|FSHD region gene 1 family, member B##BC062743|FRG1B|284802|FSHD region gene 1 family, member B##BC095491|FRG1B|284802|FSHD region gene 1 family, member B##AK057099|LOC642236|642236|FSHD region gene 1 pseudogene##BC036544|LOC284801|284801|uncharacterized LOC284801##DQ012020|DEFB116|245930|defensin, beta 116##NM_001037731|DEFB116|245930|defensin, beta 116##BC035677|DEFB118|117285|defensin, beta 118##NM_054112|DEFB118|117285|defensin, beta 118##AF347073|DEFB118|117285|defensin, beta 118##BC117378|DEFB118|117285|defensin, beta 118##HQ258709|DEFB118|117285|defensin, beta 118##AF529415|DEFB118|117285|defensin, beta 118##AF479698|DEFB119|245932|defensin, beta 119##AF479699|DEFB119|245932|defensin, beta 119##AY122473|DEFB119|245932|defensin, beta 119##AY501001|DEFB119|245932|defensin, beta 119##AY358860|DEFB119|245932|defensin, beta 119##BC062212|DEFB119|245932|defensin, beta 119##AY122472|DEFB119|245932|defensin, beta 119##NM_153289|DEFB119|245932|defensin, beta 119##NM_153323|DEFB119|245932|defensin, beta 119##NM_173460|DEFB119|245932|defensin, beta 119	1.120885	CTCF.p2:24:0.995
chr21	32481406	32481548	reg1018652.p1	7.230	+	AB096964 NM_001099219	-70683	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	-227619	-	AJ457063 AB096962 NM_181606	-279489	-	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	449881	-	TSC_hg19_v1_chr21_+_33032005 NM_000454 AK312116 BC001034 X02317 EF151142 AB464254 AY049787 AY450286 BT006676 CR450355 CR541742 CU674512 EF143990	550530	+	AB032998 AK025748 AL117417 TSC_hg19_v1_chr21_-_33074136	592641	-	AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##NM_000454|SOD1|6647|superoxide dismutase 1, soluble##AK312116|SOD1|6647|superoxide dismutase 1, soluble##BC001034|SOD1|6647|superoxide dismutase 1, soluble##X02317|SOD1|6647|superoxide dismutase 1, soluble##EF151142|SOD1|6647|superoxide dismutase 1, soluble##AY049787|SOD1|6647|superoxide dismutase 1, soluble##AY450286|SOD1|6647|superoxide dismutase 1, soluble##BT006676|SOD1|6647|superoxide dismutase 1, soluble##CR450355|SOD1|6647|superoxide dismutase 1, soluble##CR541742|SOD1|6647|superoxide dismutase 1, soluble##EF143990|SOD1|6647|superoxide dismutase 1, soluble##AB032998|SCAF4|57466|SR-related CTD-associated factor 4##AK025748|SCAF4|57466|SR-related CTD-associated factor 4##AL117417|SCAF4|57466|SR-related CTD-associated factor 4	0.97617	CTCF.p2:1:0.976
chr3	145783433	145783544	reg1018860.p1	7.230	+	NM_001134470 AK294020	-2091271	+	TSC_hg19_v1_chr3_+_143690915 BC037293	-2092498	+	NM_173552 AK315082	-2092836	+	AB527423 U84573 AK295084 TSC_hg19_v1_chr3_-_145878818	95319	-	TSC_hg19_v1_chr3_-_145878972 BC037169 AB209879	95468	-	TSC_hg19_v1_chr3_-_145879223 NM_000935 NM_182943	95763	-	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58##AK294020|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##U84573|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AK295084|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##BC037169|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AB209879|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_000935|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_182943|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2	0.989921	CTCF.p2:7:0.990
chr4	20424184	20424305	reg1018237.p1	7.230	+	AB017168 NM_004787 BC117190 BC143978 AF133270	-168908	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-2400778	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-2611633	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	277823	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	561385	-	AY118170 DQ148489 NM_147183 AK290998	881325	-	AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4##AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4	0.139488	
chr5	111865376	111865486	reg1018788.p2	7.230	+	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	-110558	-	TSC_hg19_v1_chr5_+_111496560 AB002437	-368862	+	AK298779 NM_001142474 NM_001142475	-552857	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	177780	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	208142	+	NM_001204193 NM_001204194 NM_001204196 NM_001204199 NM_003135 TSC_hg19_v1_chr5_+_112196975	331498	+	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli##NM_001204193|SRP19|6728|signal recognition particle 19kDa##NM_001204194|SRP19|6728|signal recognition particle 19kDa##NM_001204196|SRP19|6728|signal recognition particle 19kDa##NM_001204199|SRP19|6728|signal recognition particle 19kDa##NM_003135|SRP19|6728|signal recognition particle 19kDa	0.0	
chr1	205877045	205877142	reg1016007.p1	7.229	+	BC039170 BC063477 AK057131 AK290786 TSC_hg19_v1_chr1_-_205819261 NM_152491	-57834	-	TSC_hg19_v1_chr1_+_205782474 AK097788	-94592	+	TSC_hg19_v1_chr1_-_205782160 AL831974 AL832001 AL832362 BX641054 NM_173854 BX648979	-94926	-	BC151208 BC136538 BC144233 AF331525 NM_052934 NM_134325	35473	-	TSC_hg19_v1_chr1_-_206137445 AK124556	260355	-	BC035696 NM_001123168 BC137545 BC137546	261823	+	BC039170|PM20D1|148811|peptidase M20 domain containing 1##BC063477|PM20D1|148811|peptidase M20 domain containing 1##AK057131|PM20D1|148811|peptidase M20 domain containing 1##AK290786|PM20D1|148811|peptidase M20 domain containing 1##NM_152491|PM20D1|148811|peptidase M20 domain containing 1##AL831974|SLC41A1|254428|solute carrier family 41, member 1##AL832001|SLC41A1|254428|solute carrier family 41, member 1##AL832362|SLC41A1|254428|solute carrier family 41, member 1##BX641054|SLC41A1|254428|solute carrier family 41, member 1##NM_173854|SLC41A1|254428|solute carrier family 41, member 1##BX648979|SLC41A1|254428|solute carrier family 41, member 1##BC151208|SLC26A9|115019|solute carrier family 26, member 9##BC136538|SLC26A9|115019|solute carrier family 26, member 9##BC144233|SLC26A9|115019|solute carrier family 26, member 9##AF331525|SLC26A9|115019|solute carrier family 26, member 9##NM_052934|SLC26A9|115019|solute carrier family 26, member 9##NM_134325|SLC26A9|115019|solute carrier family 26, member 9##AK124556|LOC100132966|100132966|uncharacterized LOC100132966##BC035696|FAM72A|729533|family with sequence similarity 72, member A##NM_001123168|FAM72A|729533|family with sequence similarity 72, member A##BC137545|FAM72A|729533|family with sequence similarity 72, member A##BC137546|FAM72B|653820|family with sequence similarity 72, member B	0.26105	CTCF.p2:-4:0.261
chr12	5309847	5309957	reg1018383.p1	7.229	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	-156783	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	-290842	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	-391487	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	231374	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	293436	+	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	744572	-	M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2	0.714363	CTCF.p2:-34:0.690
chr2	200328246	200328365	reg1018435.p1	7.229	+	AB028957 TSC_hg19_v1_chr2_-_200325214	-3064	-	AK096649 TSC_hg19_v1_chr2_+_200323124 AK308721	-5179	+	TSC_hg19_v1_chr2_-_200322735 AK056638 NM_001172509	-5544	-	TSC_hg19_v1_chr2_-_200329812 AB209376 NM_001172517	1515	-	AK291463 NM_015265	7683	-	AB568489 TSC_hg19_v1_chr2_-_200715872	387558	-	AB028957|SATB2|23314|SATB homeobox 2##AK056638|SATB2|23314|SATB homeobox 2##NM_001172509|SATB2|23314|SATB homeobox 2##AB209376|SATB2|23314|SATB homeobox 2##NM_001172517|SATB2|23314|SATB homeobox 2##AK291463|SATB2|23314|SATB homeobox 2##NM_015265|SATB2|23314|SATB homeobox 2##AB568489|FONG|348751|uncharacterized LOC348751	0.01034	
chr9	100978259	100978363	reg1019779.p1	7.229	+	TSC_hg19_v1_chr9_-_100954922 AK292788 BC011690 AB209809 NM_052820	-23378	-	NM_003389	-43138	-	TSC_hg19_v1_chr9_-_100881526 AK055833	-96767	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	39410	-	TSC_hg19_v1_chr9_-_101018013 NM_018421	39693	-	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	492874	-	AK292788|CORO2A|7464|coronin, actin binding protein, 2A##BC011690|CORO2A|7464|coronin, actin binding protein, 2A##AB209809|CORO2A|7464|coronin, actin binding protein, 2A##NM_052820|CORO2A|7464|coronin, actin binding protein, 2A##NM_003389|CORO2A|7464|coronin, actin binding protein, 2A##AK055833|TRIM14|9830|tripartite motif containing 14##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##NM_018421|TBC1D2|55357|TBC1 domain family, member 2##DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2	0.663898	CTCF.p2:7:0.664
chrX	119609433	119609520	reg1018412.p2	7.229	+	TSC_hg19_v1_chrX_-_119603160 BC002965 S79873 U36336 X77196 AK295038 NM_001122606 NM_002294 NM_013995	-6282	-	TSC_hg19_v1_chrX_-_119603152 AK291090 AK293931	-6331	-	TSC_hg19_v1_chrX_-_119603122 J04183	-6376	-	AY365125 AF212995 TSC_hg19_v1_chrX_-_119694635 AK123688	85106	-	TSC_hg19_v1_chrX_-_119694758 BX537787 BX647096 CR936722 NM_001079872	85291	-	TSC_hg19_v1_chrX_-_119694954 BX537641	85442	-	BC002965|LAMP2|3920|lysosomal-associated membrane protein 2##S79873|LAMP2|3920|lysosomal-associated membrane protein 2##U36336|LAMP2|3920|lysosomal-associated membrane protein 2##X77196|LAMP2|3920|lysosomal-associated membrane protein 2##AK295038|LAMP2|3920|lysosomal-associated membrane protein 2##NM_001122606|LAMP2|3920|lysosomal-associated membrane protein 2##NM_002294|LAMP2|3920|lysosomal-associated membrane protein 2##NM_013995|LAMP2|3920|lysosomal-associated membrane protein 2##AK291090|LAMP2|3920|lysosomal-associated membrane protein 2##AK293931|LAMP2|3920|lysosomal-associated membrane protein 2##J04183|LAMP2|3920|lysosomal-associated membrane protein 2##AY365125|CUL4B|8450|cullin 4B##AF212995|CUL4B|8450|cullin 4B##AK123688|CUL4B|8450|cullin 4B##BX537787|CUL4B|8450|cullin 4B##BX647096|CUL4B|8450|cullin 4B##CR936722|CUL4B|8450|cullin 4B##NM_001079872|CUL4B|8450|cullin 4B##BX537641|CUL4B|8450|cullin 4B	0.0	
chr13	30929622	30929719	reg1018530.p2	7.228	+	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-48101	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	-48519	-	TSC_hg19_v1_chr13_-_30424811 NM_007106	-504829	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	110323	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	110388	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	261957	-	AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##NM_007106|UBL3|5412|ubiquitin-like 3##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1	0.080207	
chr19	33907249	33907367	reg1018357.p1	7.228	+	NM_001252296	-41879	+	NM_001806 TSC_hg19_v1_chr19_+_33864635 U20240 BC013128 AK313634	-42656	+	TSC_hg19_v1_chr19_+_33793749 BC027959 AK022417 BC113872 BC114482	-113449	+	TSC_hg19_v1_chr19_-_34012698 BT006692 CR541669 CU677179 DQ891114 DQ894294 BC004305 BC028295 AK225037 AK290756 J04605 AK293126 AK290781 AK291561 AK294619 BC015027 NM_000285 NM_001166056 NM_001166057	105404	-	TSC_hg19_v1_chr19_+_34112858 NM_001127895 NM_001127896 BC014250 BC011380 AB047801	205627	+	BC018723 NM_022467	268125	+	NM_001252296|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##NM_001806|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##U20240|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##BC013128|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##AK313634|CEBPG|1054|CCAAT/enhancer binding protein (C/EBP), gamma##BC027959|LOC80054|80054|uncharacterized LOC80054##AK022417|LOC80054|80054|uncharacterized LOC80054##BC113872|LOC80054|80054|uncharacterized LOC80054##BC114482|LOC80054|80054|uncharacterized LOC80054##BT006692|PEPD|5184|peptidase D##CR541669|PEPD|5184|peptidase D##DQ891114|PEPD|5184|peptidase D##DQ894294|PEPD|5184|peptidase D##BC004305|PEPD|5184|peptidase D##BC028295|PEPD|5184|peptidase D##AK225037|PEPD|5184|peptidase D##AK290756|PEPD|5184|peptidase D##J04605|PEPD|5184|peptidase D##AK293126|PEPD|5184|peptidase D##AK290781|PEPD|5184|peptidase D##AK291561|PEPD|5184|peptidase D##AK294619|PEPD|5184|peptidase D##BC015027|PEPD|5184|peptidase D##NM_000285|PEPD|5184|peptidase D##NM_001166056|PEPD|5184|peptidase D##NM_001166057|PEPD|5184|peptidase D##NM_001127895|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127896|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC014250|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC011380|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##AB047801|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	0.999477	CTCF.p2:-2:0.999
chr5	43610007	43610128	reg1017871.p2	7.228	+	Z50101 AB385177 AM392664 AM393615 TSC_hg19_v1_chr5_+_43609371	-751	+	TSC_hg19_v1_chr5_+_43603313 BC110543 BC110544	-6713	+	TSC_hg19_v1_chr5_+_43603303 AK299622 U40490	-6768	+	AF508782 AB002097 AF411527 BC069561 CR541665 CR541688 GQ351295 HQ258011 NM_004465 U67918 BC105023 BC105021 BC143772	778698	-	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	1198960	+	AF064876 TSC_hg19_v1_chr5_-_45695947	2085824	-	Z50101|NNT|23530|nicotinamide nucleotide transhydrogenase##AM392664|NNT|23530|nicotinamide nucleotide transhydrogenase##AM393615|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110543|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110544|NNT|23530|nicotinamide nucleotide transhydrogenase##AK299622|NNT|23530|nicotinamide nucleotide transhydrogenase##U40490|NNT|23530|nicotinamide nucleotide transhydrogenase##AF508782|FGF10|2255|fibroblast growth factor 10##AB002097|FGF10|2255|fibroblast growth factor 10##AF411527|FGF10|2255|fibroblast growth factor 10##BC069561|FGF10|2255|fibroblast growth factor 10##CR541665|FGF10|2255|fibroblast growth factor 10##CR541688|FGF10|2255|fibroblast growth factor 10##GQ351295|FGF10|2255|fibroblast growth factor 10##HQ258011|FGF10|2255|fibroblast growth factor 10##NM_004465|FGF10|2255|fibroblast growth factor 10##U67918|FGF10|2255|fibroblast growth factor 10##BC105023|FGF10|2255|fibroblast growth factor 10##BC105021|FGF10|2255|fibroblast growth factor 10##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1	0.587922	CTCF.p2:0:0.588
chr14	87121046	87121167	reg1018631.p1	7.227	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-1121521	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-1124565	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-1124633	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	1338357	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	1338453	-	NM_001201402	1338902	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	0.998499	CTCF.p2:-17:0.998
chr15	50651167	50651295	reg1022311.p1	7.227	+	TSC_hg19_v1_chr15_+_50647681 BX537481	-3560	+	NM_002041 NM_005254 NM_016654 NM_016655 NM_181427	-3627	-	D13317 TSC_hg19_v1_chr15_-_50647396 AK301350 BC036080	-3839	-	TSC_hg19_v1_chr15_+_50716601 AK292400 BX537420 NM_001128610 NM_001128611 NM_005154 AK296480 BC038801 D29956 BC015545 BC110590 BC092443 BC026954 BC051345	65390	+	NM_203494	187670	-	TSC_hg19_v1_chr15_-_50978746 BC128987 BC128988	327535	-	BX537481|LOC100129387|100129387|uncharacterized LOC100129387##NM_002041|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##NM_005254|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##NM_016654|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##NM_016655|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##NM_181427|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##D13317|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##AK301350|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##BC036080|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##AK292400|USP8|9101|ubiquitin specific peptidase 8##BX537420|USP8|9101|ubiquitin specific peptidase 8##NM_001128610|USP8|9101|ubiquitin specific peptidase 8##NM_001128611|USP8|9101|ubiquitin specific peptidase 8##NM_005154|USP8|9101|ubiquitin specific peptidase 8##AK296480|USP8|9101|ubiquitin specific peptidase 8##BC038801|USP8|9101|ubiquitin specific peptidase 8##D29956|USP8|9101|ubiquitin specific peptidase 8##BC015545|USP8|9101|ubiquitin specific peptidase 8##BC110590|USP8|9101|ubiquitin specific peptidase 8##BC092443|USP8|9101|ubiquitin specific peptidase 8##BC026954|USP8|9101|ubiquitin specific peptidase 8##BC051345|USP8|9101|ubiquitin specific peptidase 8##NM_203494|USP50|373509|ubiquitin specific peptidase 50##BC128987|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7##BC128988|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7	0.10513	
chr17	65713853	65713995	reg1019578.p2	7.227	+	BC007905 NM_012417 NM_181671	-340001	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-340336	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-340515	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	126	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	107778	+	AK293224 TSC_hg19_v1_chr17_+_65822221	108293	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.249923	CTCF.p2:11:0.250
chr7	111370692	111370822	reg1020949.p1	7.227	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	-168273	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-639634	+	NM_001024607	-2846121	-	TSC_hg19_v1_chr7_-_111428948 AK294820	58254	-	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	475508	-	TSC_hg19_v1_chr7_-_111846458 AK095906 AK309605 NM_014705	475705	-	AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AK294820|DOCK4|9732|dedicator of cytokinesis 4##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4##AK095906|DOCK4|9732|dedicator of cytokinesis 4##AK309605|DOCK4|9732|dedicator of cytokinesis 4##NM_014705|DOCK4|9732|dedicator of cytokinesis 4	0.018244	
chr11	62448378	62448525	reg1021412.p1	7.226	+	AK054832 AK300542 AK303471 TSC_hg19_v1_chr11_-_62446546 BC040129 AK297856	-1891	-	CU674676 GQ129328 TSC_hg19_v1_chr11_-_62446540 M68864 BC001372 NM_015853 BC000902 BC032689 AK316012	-1984	-	TSC_hg19_v1_chr11_-_62439241 AK055736 BC001434 NM_024099	-9215	-	AK291334 TSC_hg19_v1_chr11_-_62457003 AY358354 BC053902 AL834319	8649	-	NM_203422	8919	-	TSC_hg19_v1_chr11_-_62472904 CU678804 CU680238 CU692014	24491	-	AK054832|UBXN1|51035|UBX domain protein 1##AK300542|UBXN1|51035|UBX domain protein 1##AK303471|UBXN1|51035|UBX domain protein 1##BC040129|UBXN1|51035|UBX domain protein 1##AK297856|UBXN1|51035|UBX domain protein 1##GQ129328|UBXN1|51035|UBX domain protein 1##M68864|UBXN1|51035|UBX domain protein 1##BC001372|UBXN1|51035|UBX domain protein 1##NM_015853|UBXN1|51035|UBX domain protein 1##BC000902|UBXN1|51035|UBX domain protein 1##BC032689|UBXN1|51035|UBX domain protein 1##AK316012|UBXN1|51035|UBX domain protein 1##AK055736|C11orf48|79081|chromosome 11 open reading frame 48##BC001434|C11orf48|79081|chromosome 11 open reading frame 48##NM_024099|C11orf48|79081|chromosome 11 open reading frame 48##AK291334|LRRN4CL|221091|LRRN4 C-terminal like##AY358354|LRRN4CL|221091|LRRN4 C-terminal like##BC053902|LRRN4CL|221091|LRRN4 C-terminal like##AL834319|LRRN4CL|221091|LRRN4 C-terminal like##NM_203422|LRRN4CL|221091|LRRN4 C-terminal like	0.02092	
chr15	59983560	59983682	reg1020854.p1	7.226	+	BC002461 TSC_hg19_v1_chr15_-_59981517 AK308237 NM_004330	-2042	-	TSC_hg19_v1_chr15_-_59981511 U15173	-2147	-	TSC_hg19_v1_chr15_-_59949715 X81713 U21242 U14193 BC000287 BC001919 AK312015 NM_004492	-33971	-	AK290944 NM_012182 TSC_hg19_v1_chr15_+_60296425	312807	+	EF565104 TSC_hg19_v1_chr15_+_60296453	312828	+	TSC_hg19_v1_chr15_+_60296509 AK314075	312928	+	BC002461|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##AK308237|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##NM_004330|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##U15173|BNIP2|663|BCL2/adenovirus E1B 19kDa interacting protein 2##X81713|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##U21242|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##U14193|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##BC000287|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##BC001919|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##AK312015|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##NM_004492|GTF2A2|2958|general transcription factor IIA, 2, 12kDa##AK290944|FOXB1|27023|forkhead box B1##NM_012182|FOXB1|27023|forkhead box B1##AK314075|FOXB1|27023|forkhead box B1	0.659992	CTCF.p2:-7:0.660
chr1	175712847	175712966	reg1021528.p1	7.225	+	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	-196	-	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-550876	-	AK127044 NM_022093	-675913	+	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	463259	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	463412	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	463463	-	AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2	0.725401	CTCF.p2:-4:0.725
chr19	58414842	58414944	reg1016914.p2	7.225	+	BC056684 AF086563 AK022663 TSC_hg19_v1_chr19_-_58400401 AK300483 NM_001144989	-14529	-	TSC_hg19_v1_chr19_+_58361226 AK027616 BC126237 BC126239 BC144112 BC144113 AB464407	-53581	+	NM_001204817 NM_032828 TSC_hg19_v1_chr19_+_58361208	-53698	+	TSC_hg19_v1_chr19_-_58427961 BC025783 AK293789 BC103757 NM_152475	13079	-	AK056113 AY695825 NM_133460 AK304632 AK293723	31853	-	TSC_hg19_v1_chr19_-_58459075 BC001438 AK314094 NM_005773	44169	-	BC056684|ZNF814|730051|zinc finger protein 814##AF086563|ZNF814|730051|zinc finger protein 814##AK022663|ZNF814|730051|zinc finger protein 814##AK300483|ZNF814|730051|zinc finger protein 814##NM_001144989|ZNF814|730051|zinc finger protein 814##AK027616|ZNF587|84914|zinc finger protein 587##BC126237|ZNF587|84914|zinc finger protein 587##BC126239|ZNF587|84914|zinc finger protein 587##BC144112|ZNF587|84914|zinc finger protein 587##BC144113|ZNF587|84914|zinc finger protein 587##NM_001204817|ZNF587|84914|zinc finger protein 587##NM_032828|ZNF587|84914|zinc finger protein 587##BC025783|ZNF417|147687|zinc finger protein 417##AK293789|ZNF417|147687|zinc finger protein 417##BC103757|ZNF417|147687|zinc finger protein 417##NM_152475|ZNF417|147687|zinc finger protein 417##AK056113|ZNF418|147686|zinc finger protein 418##AY695825|ZNF418|147686|zinc finger protein 418##NM_133460|ZNF418|147686|zinc finger protein 418##AK304632|ZNF418|147686|zinc finger protein 418##AK293723|ZNF418|147686|zinc finger protein 418##BC001438|ZNF256|10172|zinc finger protein 256##AK314094|ZNF256|10172|zinc finger protein 256##NM_005773|ZNF256|10172|zinc finger protein 256	0.776209	CTCF.p2:12:0.776
chr2	86991969	86992112	reg1021913.p1	7.225	+	AK294389 NM_001198954	-43796	-	TSC_hg19_v1_chr2_+_86947570 BC012165 CU680248 CU690448 AB528949 EU831470 EU831557	-44361	+	TSC_hg19_v1_chr2_+_86947435 AK022815 BC047668	-44555	+	DQ893323 DQ896638 DQ896639 BC025715 M12828 M12824 TSC_hg19_v1_chr2_-_87018039	25956	-	AK097942 TSC_hg19_v1_chr2_-_87018069	26028	-	TSC_hg19_v1_chr2_-_87018118 AY039664	26081	-	AK294389|RNF103-CHMP3|100526767|RNF103-CHMP3 readthrough##NM_001198954|RNF103-CHMP3|100526767|RNF103-CHMP3 readthrough##BC012165|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)##EU831470|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)##EU831557|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)##AK022815|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)##BC047668|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)##DQ893323|CD8A|925|CD8a molecule##DQ896638|CD8A|925|CD8a molecule##DQ896639|CD8A|925|CD8a molecule##BC025715|CD8A|925|CD8a molecule##M12828|CD8A|925|CD8a molecule##M12824|CD8A|925|CD8a molecule##AK097942|CD8A|925|CD8a molecule##AY039664|CD8A|925|CD8a molecule	0.983968	CTCF.p2:5:0.984
chr3	196189710	196189890	reg1014029.p1	7.225	+	TSC_hg19_v1_chr3_-_196159304 NM_015562	-30467	-	TSC_hg19_v1_chr3_-_196159299 AK026451 AK129880 AK303630 AK308699 AK307899	-30501	-	AB018337 TSC_hg19_v1_chr3_-_196159295 BC047420	-30517	-	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	40778	-	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	52413	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	105590	-	NM_015562|UBXN7|26043|UBX domain protein 7##AK026451|UBXN7|26043|UBX domain protein 7##AK129880|UBXN7|26043|UBX domain protein 7##AK303630|UBXN7|26043|UBX domain protein 7##AK308699|UBXN7|26043|UBX domain protein 7##AK307899|UBXN7|26043|UBX domain protein 7##AB018337|UBXN7|26043|UBX domain protein 7##BC047420|UBXN7|26043|UBX domain protein 7##BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53	0.0	
chr3	31734263	31734361	reg1017934.p1	7.225	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	-159830	+	TSC_hg19_v1_chr3_+_31574468 AK074587	-159863	+	TSC_hg19_v1_chr3_+_31574119 AK311488	-160182	+	TSC_hg19_v1_chr3_-_32022751 BC003168 AF346291 AK304067 AK097503	288457	-	AK294003 NM_001137674	288953	+	AF392451 NM_001174060 NM_017784	288977	-	AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##BC003168|OSBPL10|114884|oxysterol binding protein-like 10##AF346291|OSBPL10|114884|oxysterol binding protein-like 10##AK304067|OSBPL10|114884|oxysterol binding protein-like 10##AK294003|ZNF860|344787|zinc finger protein 860##NM_001137674|ZNF860|344787|zinc finger protein 860##AF392451|OSBPL10|114884|oxysterol binding protein-like 10##NM_001174060|OSBPL10|114884|oxysterol binding protein-like 10##NM_017784|OSBPL10|114884|oxysterol binding protein-like 10	0.060449	
chr4	47385969	47386093	reg1019524.p1	7.225	+	NM_000812 AK296023	-352684	+	AK090780 NM_000809	-389608	-	CU690038 DQ891679 DQ894864 EU176605 U30461 NM_001204266 NM_001204267 BC035055	-390535	-	TSC_hg19_v1_chr4_-_47465683 AY542163 BC015145 NM_017845 AK000509 BC019826 AF182421	79648	-	TSC_hg19_v1_chr4_-_47465720 BC008371	79697	-	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	101299	+	NM_000812|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1##AK296023|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1##AK090780|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_000809|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##AY542163|COMMD8|54951|COMM domain containing 8##BC015145|COMMD8|54951|COMM domain containing 8##NM_017845|COMMD8|54951|COMM domain containing 8##AK000509|COMMD8|54951|COMM domain containing 8##BC019826|COMMD8|54951|COMM domain containing 8##AF182421|COMMD8|54951|COMM domain containing 8##BC008371|COMMD8|54951|COMM domain containing 8##BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D	0.981159	CTCF.p2:16:0.981
chr5	137799835	137799993	reg1015299.p1	7.225	+	AY562240 TSC_hg19_v1_chr5_+_137774899 AF251041	-25008	+	TSC_hg19_v1_chr5_+_137774760 AK056193 AK291101 AK223611 BC006218 NM_016606 AK293480 AK290547	-25186	+	TSC_hg19_v1_chr5_+_137688386 BC146788 AB029005 AB527166	-111479	+	TSC_hg19_v1_chr5_+_137801167 AK298101 AK301065	1257	+	TSC_hg19_v1_chr5_+_137801192 NM_001964 X52541 BC073983 M62829 M80583 BC041701 CU687282 AB591041 EU832310 EU832395	1400	+	TSC_hg19_v1_chr5_-_137848536 X80916	48639	-	AY562240|REEP2|51308|receptor accessory protein 2##AF251041|REEP2|51308|receptor accessory protein 2##AK056193|REEP2|51308|receptor accessory protein 2##AK291101|REEP2|51308|receptor accessory protein 2##AK223611|REEP2|51308|receptor accessory protein 2##BC006218|REEP2|51308|receptor accessory protein 2##NM_016606|REEP2|51308|receptor accessory protein 2##AK293480|REEP2|51308|receptor accessory protein 2##AK290547|REEP2|51308|receptor accessory protein 2##BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B##AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B##AK298101|EGR1|1958|early growth response 1##AK301065|EGR1|1958|early growth response 1##NM_001964|EGR1|1958|early growth response 1##X52541|EGR1|1958|early growth response 1##BC073983|EGR1|1958|early growth response 1##M62829|EGR1|1958|early growth response 1##M80583|EGR1|1958|early growth response 1##BC041701|EGR1|1958|early growth response 1##EU832310|EGR1|1958|early growth response 1##EU832395|EGR1|1958|early growth response 1##X80916|ETF1|2107|eukaryotic translation termination factor 1	0.992801	CTCF.p2:49:0.993
chrX	64887633	64887813	reg1019638.p2	7.225	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	-75	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	-176	+	NM_002444 TSC_hg19_v1_chrX_+_64887520	-206	+	TSC_hg19_v1_chrX_+_65235302 DQ680071 DQ680072	347568	+	DQ891770 DQ894953 BC010525 AJ132502 AK293215 AK298389 AK075153 AK297050 AK301417 AK075171 NM_001100431 NM_001184830 NM_001184831 NM_007268	372179	-	NM_138737 TSC_hg19_v1_chrX_+_65382512	494752	+	AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##NM_002444|MSN|4478|moesin##DQ891770|VSIG4|11326|V-set and immunoglobulin domain containing 4##DQ894953|VSIG4|11326|V-set and immunoglobulin domain containing 4##BC010525|VSIG4|11326|V-set and immunoglobulin domain containing 4##AJ132502|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK293215|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK298389|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075153|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK297050|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK301417|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075171|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001100431|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184830|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184831|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_007268|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_138737|HEPH|9843|hephaestin	0.0	
chr1	20301423	20301519	reg1019016.p1	7.224	+	AB464018 AF189279 BC069116 NM_014589	-51391	-	TSC_hg19_v1_chr1_+_20208923 AB385337	-92508	+	TSC_hg19_v1_chr1_+_20208920 AB007928	-92557	+	M22430 AK291302 NM_001161729	4651	-	BC005919 NM_000300 NM_001161727 NM_001161728	5448	-	TSC_hg19_v1_chr1_+_20396654 NM_000929 BC036792 U03090	95273	+	AF189279|PLA2G2E|30814|phospholipase A2, group IIE##BC069116|PLA2G2E|30814|phospholipase A2, group IIE##NM_014589|PLA2G2E|30814|phospholipase A2, group IIE##AB007928|OTUD3|23252|OTU domain containing 3##M22430|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##AK291302|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161729|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##BC005919|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_000300|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161727|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161728|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_000929|PLA2G5|5322|phospholipase A2, group V##BC036792|PLA2G5|5322|phospholipase A2, group V##U03090|PLA2G5|5322|phospholipase A2, group V	0.0	
chr6_ssto_hap7	2698635	2698746	reg1019908.p2	7.224	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.99593	CTCF.p2:-7:0.996
chr13	30498438	30498553	reg1017754.p2	7.223	+	TSC_hg19_v1_chr13_-_30424811 NM_007106	-73654	-	TSC_hg19_v1_chr13_-_30424719 AK056580	-73793	-	BC059385 BC044582 TSC_hg19_v1_chr13_-_30424481	-74089	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	382656	-	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	383074	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	541498	-	NM_007106|UBL3|5412|ubiquitin-like 3##AK056580|UBL3|5412|ubiquitin-like 3##BC059385|UBL3|5412|ubiquitin-like 3##BC044582|UBL3|5412|ubiquitin-like 3##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1	0.999359	CTCF.p2:9:0.999
chr11	20376910	20377031	reg1021630.p1	7.222	+	NM_001029865	-195101	-	AK290458 TSC_hg19_v1_chr11_+_20070637	-306347	+	TSC_hg19_v1_chr11_+_20049136 AK307574	-327838	+	NM_006410 TSC_hg19_v1_chr11_+_20385245 NM_001098521	8272	+	TSC_hg19_v1_chr11_+_20385268 AK292092 NM_001098520	8311	+	TSC_hg19_v1_chr11_+_20385346 BC002439 NM_001098522	8393	+	NM_001029865|DBX1|120237|developing brain homeobox 1##AK290458|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##NM_006410|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098521|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AK292092|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098520|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##BC002439|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098522|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa	0.361778	CTCF.p2:4:0.362
chr11	73744214	73744325	reg1019394.p1	7.222	+	NM_003356 NM_022803	-23988	-	TSC_hg19_v1_chr11_-_73694300 AK025742	-49926	-	TSC_hg19_v1_chr11_-_73693886 AK222540 AK222557 NM_003355	-50384	-	TSC_hg19_v1_chr11_-_73881923 AB231764 AK092089 AX747350 BC037429 NM_015531	137799	-	TSC_hg19_v1_chr11_+_73882299 AK022725	138013	+	TSC_hg19_v1_chr11_+_73882350 BC003046 BC050705 AK225647 AF157028 NM_016147 AK001381	138074	+	NM_003356|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##NM_022803|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##AK025742|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3##AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3##NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3##AK022725|PPME1|51400|protein phosphatase methylesterase 1##BC003046|PPME1|51400|protein phosphatase methylesterase 1##BC050705|PPME1|51400|protein phosphatase methylesterase 1##AK225647|PPME1|51400|protein phosphatase methylesterase 1##AF157028|PPME1|51400|protein phosphatase methylesterase 1##NM_016147|PPME1|51400|protein phosphatase methylesterase 1##AK001381|PPME1|51400|protein phosphatase methylesterase 1	0.0	
chr8	87045541	87045647	reg1018831.p1	7.222	+	NM_172239	-256289	-	NM_172239	-469869	-	NM_000067 AF015039 TSC_hg19_v1_chr8_+_86376232 AK312978 BC011949 J03037 Y00339 M36532 DQ891320 DQ894504 AB591010 CU680124 CR536526 CR541875	-669374	+	AY037806 HQ258398 NM_033126 BC126180 BC126182 BC144195	36293	-	BC065207 TSC_hg19_v1_chr8_+_87111138 AK096027 NM_152565 AY079172	65550	+	AJ417661 BC125165 BC125166 AK055815 NM_138817 BC029436	196964	-	NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1##NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1##NM_000067|CA2|760|carbonic anhydrase II##AF015039|CA2|760|carbonic anhydrase II##AK312978|CA2|760|carbonic anhydrase II##BC011949|CA2|760|carbonic anhydrase II##J03037|CA2|760|carbonic anhydrase II##Y00339|CA2|760|carbonic anhydrase II##M36532|CA2|760|carbonic anhydrase II##DQ891320|CA2|760|carbonic anhydrase II##DQ894504|CA2|760|carbonic anhydrase II##CR536526|CA2|760|carbonic anhydrase II##CR541875|CA2|760|carbonic anhydrase II##AY037806|PSKH2|85481|protein serine kinase H2##HQ258398|PSKH2|85481|protein serine kinase H2##NM_033126|PSKH2|85481|protein serine kinase H2##BC126180|PSKH2|85481|protein serine kinase H2##BC126182|PSKH2|85481|protein serine kinase H2##BC144195|PSKH2|85481|protein serine kinase H2##BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AJ417661|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC125165|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC125166|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##AK055815|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##NM_138817|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC029436|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13	0.947421	CTCF.p2:10:0.947
chr16	66773980	66774085	reg1018079.p1	7.221	+	TSC_hg19_v1_chr16_-_66730647 BC093679 AF479814 AF521889 AF521890 NM_178818 NM_181521	-43400	-	TSC_hg19_v1_chr16_+_66638658 BC023509 BC023591	-135352	+	TSC_hg19_v1_chr16_+_66638636 AY166714	-135391	+	TSC_hg19_v1_chr16_-_66785505 AK304233 AF035812 BC025959 AK291766 AK303031 BX648863	11460	-	BC010928 TSC_hg19_v1_chr16_-_66785513 AK295049 NM_006141	11530	-	AK093213 AX747993 NM_001136505	61490	-	BC093679|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF479814|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521889|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521890|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_178818|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_181521|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##BC023509|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC023591|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##AK304233|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AF035812|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC025959|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK291766|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK303031|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BX648863|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC010928|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK295049|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##NM_006141|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK093213|CCDC79|283847|coiled-coil domain containing 79##NM_001136505|CCDC79|283847|coiled-coil domain containing 79	0.956385	CTCF.p2:4:0.777
chr3	194392297	194392447	reg1019406.p1	7.221	+	TSC_hg19_v1_chr3_-_194354410 AK126914 BC039506	-38009	-	BC014883 TSC_hg19_v1_chr3_-_194354101 BC130297 BC144158 BC144159 BC111485 NM_001011655 NM_001166305 NM_001166306 NM_138399	-38264	-	BX647418 TSC_hg19_v1_chr3_-_194353941 HQ258241	-38446	-	TSC_hg19_v1_chr3_-_194392907 BC040119 AM392577 AB463094 AB527453 BC058891 AK225094 AL136897 BC015042	523	-	TSC_hg19_v1_chr3_-_194392921 BC068500	545	-	AK002163 TSC_hg19_v1_chr3_-_194392942	579	-	AK126914|TMEM44|93109|transmembrane protein 44##BC039506|TMEM44|93109|transmembrane protein 44##BC014883|TMEM44|93109|transmembrane protein 44##BC130297|TMEM44|93109|transmembrane protein 44##BC144158|TMEM44|93109|transmembrane protein 44##BC144159|TMEM44|93109|transmembrane protein 44##BC111485|TMEM44|93109|transmembrane protein 44##NM_001011655|TMEM44|93109|transmembrane protein 44##NM_001166305|TMEM44|93109|transmembrane protein 44##NM_001166306|TMEM44|93109|transmembrane protein 44##NM_138399|TMEM44|93109|transmembrane protein 44##BX647418|TMEM44|93109|transmembrane protein 44##HQ258241|TMEM44|93109|transmembrane protein 44##BC040119|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##AM392577|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC058891|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##AK225094|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##AL136897|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC015042|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC068500|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##AK002163|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)	0.658392	CTCF.p2:-19:0.658
chr5	17189629	17189748	reg1014823.p1	7.221	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-253303	-	BC050682 BC041694 TSC_hg19_v1_chr5_-_16936357 BC108736 BC032669	-253360	-	AK316138 TSC_hg19_v1_chr5_-_16742338	-447351	-	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	27924	+	TSC_hg19_v1_chr5_+_17217804 AF039656	28152	+	AK295087 BC031051 NM_001167667 NM_004934	2798634	-	AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##BC050682|MYO10|4651|myosin X##BC041694|MYO10|4651|myosin X##BC108736|MYO10|4651|myosin X##BC032669|MYO10|4651|myosin X##AK316138|MYO10|4651|myosin X##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2	0.999683	CTCF.p2:21:1.000
chr7	43622256	43622386	reg1001215.p1	7.221	+	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	-470095	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-650352	+	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	-650520	-	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	373	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	146773	-	TSC_hg19_v1_chr7_+_43798278 NM_000712 NM_001253823 BC005902 BC008456	175946	+	AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44##NM_000712|BLVRA|644|biliverdin reductase A##NM_001253823|BLVRA|644|biliverdin reductase A##BC005902|BLVRA|644|biliverdin reductase A##BC008456|BLVRA|644|biliverdin reductase A	0.038402	
chr8	142518172	142518275	reg1019918.p2	7.221	+	BC144560 AK125848 AK131461 NM_207414	-906	-	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	-86162	+	TSC_hg19_v1_chr8_+_142402120 AK311257	-116089	+	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	966314	-	AB005297 NM_001702	1027153	+	AF193421 D87468 BC075802 BC012321 NM_015193 TSC_hg19_v1_chr8_-_143695839	1177603	-	BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1##AF193421|ARC|23237|activity-regulated cytoskeleton-associated protein##D87468|ARC|23237|activity-regulated cytoskeleton-associated protein##BC075802|ARC|23237|activity-regulated cytoskeleton-associated protein##BC012321|ARC|23237|activity-regulated cytoskeleton-associated protein##NM_015193|ARC|23237|activity-regulated cytoskeleton-associated protein	0.996687	CTCF.p2:5:0.997
chrX	152934863	152934971	reg1018249.p2	7.221	+	TSC_hg19_v1_chrX_+_152912656 BC060837	-22177	+	TSC_hg19_v1_chrX_+_152908821 BC034936 BC042166	-26042	+	TSC_hg19_v1_chrX_+_152907894 AK314250 NM_001395 Y08302	-26978	+	AK303746 NM_001135740	3825	-	BC033746 AK296067 TSC_hg19_v1_chrX_-_152939308 BC064422	4411	-	AK309148 AK296203 NM_001039582 TSC_hg19_v1_chrX_-_152939817	4877	-	BC060837|DUSP9|1852|dual specificity phosphatase 9##BC034936|DUSP9|1852|dual specificity phosphatase 9##BC042166|DUSP9|1852|dual specificity phosphatase 9##AK314250|DUSP9|1852|dual specificity phosphatase 9##NM_001395|DUSP9|1852|dual specificity phosphatase 9##Y08302|DUSP9|1852|dual specificity phosphatase 9##AK303746|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##NM_001135740|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##BC033746|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK296067|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##BC064422|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK309148|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK296203|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##NM_001039582|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase	1.008959	CTCF.p2:-11:0.999
chr1	119915265	119915386	reg1021298.p1	7.220	+	TSC_hg19_v1_chr1_+_119911431 AK298289 NM_001005783 NM_016527 BC020863 AF231917 AF203975 AY513277	-3881	+	TSC_hg19_v1_chr1_-_119683274 BC021722 CU692202 BC039889 AK223197 AJ242739 AK296799 BC044575 AK313740 AK300295 NM_015836 NM_201263	-232056	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	-232299	+	NM_001166120	42228	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	42436	+	NM_000862 S45679 AK291556 BC031999 M35493 X53321 M27137 DQ891161 DQ894342 CU689258 X55997	134637	+	AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)##BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)##BC021722|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC039889|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK223197|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AJ242739|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK296799|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC044575|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK313740|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK300295|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_015836|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_201263|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_000862|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##S45679|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##AK291556|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##BC031999|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M35493|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X53321|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M27137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ891161|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ894342|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X55997|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1	0.053505	
chr19	10616385	10616530	reg1018789.p2	7.220	+	TSC_hg19_v1_chr19_-_10614085 AK056204	-2295	-	TSC_hg19_v1_chr19_-_10614033 NM_203500	-2543	-	TSC_hg19_v1_chr19_-_10613392 BC002930 AF361886 D50922 NM_012289	-3019	-	TSC_hg19_v1_chr19_-_10625679 AB385542 DQ891290 DQ893341 DQ894474 DQ896661 AF331840 AF331841 AF331842	9230	-	BC034703 AK094880 BC067781 NM_030760	11661	-	AK074661 NM_001166215	12179	-	AK056204|KEAP1|9817|kelch-like ECH-associated protein 1##NM_203500|KEAP1|9817|kelch-like ECH-associated protein 1##BC002930|KEAP1|9817|kelch-like ECH-associated protein 1##AF361886|KEAP1|9817|kelch-like ECH-associated protein 1##D50922|KEAP1|9817|kelch-like ECH-associated protein 1##NM_012289|KEAP1|9817|kelch-like ECH-associated protein 1##DQ891290|S1PR5|53637|sphingosine-1-phosphate receptor 5##DQ893341|S1PR5|53637|sphingosine-1-phosphate receptor 5##DQ894474|S1PR5|53637|sphingosine-1-phosphate receptor 5##DQ896661|S1PR5|53637|sphingosine-1-phosphate receptor 5##AF331840|S1PR5|53637|sphingosine-1-phosphate receptor 5##AF331841|S1PR5|53637|sphingosine-1-phosphate receptor 5##AF331842|S1PR5|53637|sphingosine-1-phosphate receptor 5##BC034703|S1PR5|53637|sphingosine-1-phosphate receptor 5##AK094880|S1PR5|53637|sphingosine-1-phosphate receptor 5##BC067781|S1PR5|53637|sphingosine-1-phosphate receptor 5##NM_030760|S1PR5|53637|sphingosine-1-phosphate receptor 5##AK074661|S1PR5|53637|sphingosine-1-phosphate receptor 5##NM_001166215|S1PR5|53637|sphingosine-1-phosphate receptor 5	0.103776	
chr19	18512616	18512796	reg1019850.p2	7.220	+	BC025744 TSC_hg19_v1_chr19_-_18508433 NM_145256 BC053659 BC033825	-4286	-	TSC_hg19_v1_chr19_+_18496967 AB000584 AK225425 AK225431 AK291530 NM_004864 BC008962 U88323 BC000529 AF019770 U51731 BT019465	-15724	+	TSC_hg19_v1_chr19_+_18451449 AK289968 NM_017712 AK294497 BC042138 BC028063 AJ278828 AK000215	-61299	+	TSC_hg19_v1_chr19_+_18530163 NM_001009998 NM_032627	17421	+	TSC_hg19_v1_chr19_+_18530224 BC000274 AK098429	17519	+	TSC_hg19_v1_chr19_+_18530425 CU674122 AB464208	17734	+	BC025744|LRRC25|126364|leucine rich repeat containing 25##NM_145256|LRRC25|126364|leucine rich repeat containing 25##BC053659|LRRC25|126364|leucine rich repeat containing 25##BC033825|LRRC25|126364|leucine rich repeat containing 25##AB000584|GDF15|9518|growth differentiation factor 15##AK225431|GDF15|9518|growth differentiation factor 15##AK291530|GDF15|9518|growth differentiation factor 15##NM_004864|GDF15|9518|growth differentiation factor 15##BC008962|GDF15|9518|growth differentiation factor 15##U88323|GDF15|9518|growth differentiation factor 15##BC000529|GDF15|9518|growth differentiation factor 15##AF019770|GDF15|9518|growth differentiation factor 15##U51731|GDF15|9518|growth differentiation factor 15##BT019465|GDF15|9518|growth differentiation factor 15##AK289968|PGPEP1|54858|pyroglutamyl-peptidase I##NM_017712|PGPEP1|54858|pyroglutamyl-peptidase I##AK294497|PGPEP1|54858|pyroglutamyl-peptidase I##BC042138|PGPEP1|54858|pyroglutamyl-peptidase I##BC028063|PGPEP1|54858|pyroglutamyl-peptidase I##AJ278828|PGPEP1|54858|pyroglutamyl-peptidase I##AK000215|PGPEP1|54858|pyroglutamyl-peptidase I##NM_001009998|SSBP4|170463|single stranded DNA binding protein 4##NM_032627|SSBP4|170463|single stranded DNA binding protein 4##BC000274|SSBP4|170463|single stranded DNA binding protein 4##AK098429|SSBP4|170463|single stranded DNA binding protein 4	0.718607	CTCF.p2:-5:0.719
chr6_dbb_hap3	2462026	2462125	reg1019615.p1	7.220	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr8	109735280	109735408	reg1020054.p1	7.220	+	TSC_hg19_v1_chr8_+_109455874 AK290974 D14659 AB384437 CR457402 CU676696 CU692380 HQ447150	-279464	+	TSC_hg19_v1_chr8_+_109455865 BC021667 NM_014673 AK222615 BC007027 BC020753	-279492	+	TSC_hg19_v1_chr8_-_109260947 BC017887 AK313186 BC005944 BC016706 BC021679 U94175 U62962 BC008419 NM_001568 AK310902	-474359	-	AK055230 NM_153015 BC033057 BC030710	64462	-	BC105045 BC113360 NM_003301 X72089 D16845 AY493373 HQ258206 X75071	364352	+	AF283302 AK311583 AF521133 NM_001128211 AK307663	606790	-	AK290974|TTC35|9694|tetratricopeptide repeat domain 35##D14659|TTC35|9694|tetratricopeptide repeat domain 35##CR457402|TTC35|9694|tetratricopeptide repeat domain 35##HQ447150|TTC35|9694|tetratricopeptide repeat domain 35##BC021667|TTC35|9694|tetratricopeptide repeat domain 35##NM_014673|TTC35|9694|tetratricopeptide repeat domain 35##AK222615|TTC35|9694|tetratricopeptide repeat domain 35##BC007027|TTC35|9694|tetratricopeptide repeat domain 35##BC020753|TTC35|9694|tetratricopeptide repeat domain 35##BC017887|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK313186|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC005944|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC016706|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC021679|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U94175|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U62962|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC008419|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##NM_001568|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK310902|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK055230|TMEM74|157753|transmembrane protein 74##NM_153015|TMEM74|157753|transmembrane protein 74##BC030710|TMEM74|157753|transmembrane protein 74##BC105045|TRHR|7201|thyrotropin-releasing hormone receptor##BC113360|TRHR|7201|thyrotropin-releasing hormone receptor##NM_003301|TRHR|7201|thyrotropin-releasing hormone receptor##X72089|TRHR|7201|thyrotropin-releasing hormone receptor##D16845|TRHR|7201|thyrotropin-releasing hormone receptor##AY493373|TRHR|7201|thyrotropin-releasing hormone receptor##HQ258206|TRHR|7201|thyrotropin-releasing hormone receptor##X75071|TRHR|7201|thyrotropin-releasing hormone receptor##AF283302|NUDCD1|84955|NudC domain containing 1##AK311583|NUDCD1|84955|NudC domain containing 1##AF521133|NUDCD1|84955|NudC domain containing 1##NM_001128211|NUDCD1|84955|NudC domain containing 1##AK307663|NUDCD1|84955|NudC domain containing 1	0.0	
chr11	10388283	10388413	reg1017433.p1	7.219	+	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	-61719	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	-72582	-	AK098060 TSC_hg19_v1_chr11_+_9779882	-608486	+	AK295046 NM_001172431	83519	+	NM_000480 BC126118 TSC_hg19_v1_chr11_+_10472246 AK311436 M84720 AK289998 AK294444 AK313039 HQ258646	84047	+	NM_001025389 D12775 AK308181 M84721 AK299113 TSC_hg19_v1_chr11_+_10476953	88471	+	AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK098060|LOC283104|283104|uncharacterized LOC283104##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3##NM_000480|AMPD3|272|adenosine monophosphate deaminase 3##BC126118|AMPD3|272|adenosine monophosphate deaminase 3##AK311436|AMPD3|272|adenosine monophosphate deaminase 3##M84720|AMPD3|272|adenosine monophosphate deaminase 3##AK289998|AMPD3|272|adenosine monophosphate deaminase 3##AK294444|AMPD3|272|adenosine monophosphate deaminase 3##AK313039|AMPD3|272|adenosine monophosphate deaminase 3##HQ258646|AMPD3|272|adenosine monophosphate deaminase 3##NM_001025389|AMPD3|272|adenosine monophosphate deaminase 3##D12775|AMPD3|272|adenosine monophosphate deaminase 3##AK308181|AMPD3|272|adenosine monophosphate deaminase 3##M84721|AMPD3|272|adenosine monophosphate deaminase 3##AK299113|AMPD3|272|adenosine monophosphate deaminase 3	0.022937	
chr16	68543977	68544157	reg1000020.p1	7.219	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	-61586	-	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	-199108	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	-199241	-	TSC_hg19_v1_chr16_+_68564035 BC040871	19966	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	29131	+	NM_133458	29593	+	AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)##NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)	0.0	
chr16	87736111	87736259	reg1016696.p1	7.219	+	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	-99475	+	TSC_hg19_v1_chr16_+_87636574 AB042636	-99607	+	AB593088 TSC_hg19_v1_chr16_+_87636492 NM_020655 BC036533	-99684	+	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	63330	-	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	63385	-	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	166890	-	DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3##AB042636|JPH3|57338|junctophilin 3##NM_020655|JPH3|57338|junctophilin 3##BC036533|JPH3|57338|junctophilin 3##BC001044|KLHDC4|54758|kelch domain containing 4##BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5	0.849318	CTCF.p2:-33:0.849
chr18	67863209	67863332	reg1021923.p1	7.219	+	GU935335 GU935336 U56102 NM_006566	-239075	-	AK313199 TSC_hg19_v1_chr18_-_67615110	-248171	-	TSC_hg19_v1_chr18_+_67068214 NM_152721 AY599248 BC096744	-795040	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	9668	-	NM_004232 TSC_hg19_v1_chr18_+_67956194	92897	+	TSC_hg19_v1_chr18_+_67956280 BC020082	92991	+	GU935335|CD226|10666|CD226 molecule##GU935336|CD226|10666|CD226 molecule##U56102|CD226|10666|CD226 molecule##NM_006566|CD226|10666|CD226 molecule##AK313199|CD226|10666|CD226 molecule##NM_152721|DOK6|220164|docking protein 6##AY599248|DOK6|220164|docking protein 6##BC096744|DOK6|220164|docking protein 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC020082|SOCS6|9306|suppressor of cytokine signaling 6	0.777918	CTCF.p2:-2:0.778
chr2	152458506	152458638	reg1022402.p1	7.219	+	AY727912 NM_001177665 TSC_hg19_v1_chr2_+_152266674	-191934	+	TSC_hg19_v1_chr2_+_152266419 AY727910 AY727913 NM_001177663 NM_018151 AY727911 NM_001177664 AK299572 AK299291 BX648324 AY585745 CR933663	-192142	+	NM_007115 M31165 BC030205 AB590644 AJ419936 AJ421518 CU688838 AF086484	-244393	+	TSC_hg19_v1_chr2_-_152590990 AK096903 AK307607 BC029384 BC012533 BC056251 BC105590 NM_001164507 NM_001164508 NM_004543	132419	-	AB528315 AF493891 BT009829 DQ891193 DQ894376 TSC_hg19_v1_chr2_-_152684707 AF100740	226149	-	TSC_hg19_v1_chr2_-_152684901 AK292714 BC001254	226331	-	AY727912|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177665|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727910|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727913|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_018151|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727911|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177664|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299572|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299291|RIF1|55183|RAP1 interacting factor homolog (yeast)##BX648324|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY585745|RIF1|55183|RAP1 interacting factor homolog (yeast)##CR933663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_007115|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##M31165|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##BC030205|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AJ419936|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AJ421518|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AF086484|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AK096903|NEB|4703|nebulin##AK307607|NEB|4703|nebulin##BC029384|NEB|4703|nebulin##BC012533|NEB|4703|nebulin##BC056251|NEB|4703|nebulin##BC105590|NEB|4703|nebulin##NM_001164507|NEB|4703|nebulin##NM_001164508|NEB|4703|nebulin##NM_004543|NEB|4703|nebulin##AF493891|ARL5A|26225|ADP-ribosylation factor-like 5A##BT009829|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ891193|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ894376|ARL5A|26225|ADP-ribosylation factor-like 5A##AF100740|ARL5A|26225|ADP-ribosylation factor-like 5A##AK292714|ARL5A|26225|ADP-ribosylation factor-like 5A##BC001254|ARL5A|26225|ADP-ribosylation factor-like 5A	0.145861	
chr13	20501401	20501507	reg1018563.p1	7.218	+	TSC_hg19_v1_chr13_-_20437790 NM_001039649 NM_001039650 NM_001142684	-63646	-	AK312724 BC007048 AJ133352 AJ133353 AJ133354 AJ133355 TSC_hg19_v1_chr13_-_20437745	-63774	-	TSC_hg19_v1_chr13_-_20357160 NM_001042414	-144310	-	TSC_hg19_v1_chr13_+_20532834 BC036372 NM_003453 NM_197968 AL136621 NM_001190964 Y13472	31363	+	TSC_hg19_v1_chr13_+_20532881 AK226118 AK289741	31430	+	TSC_hg19_v1_chr13_+_20532911 AJ224901 BX647944 NM_001190965	31511	+	NM_001039649|ZMYM5|9205|zinc finger, MYM-type 5##NM_001039650|ZMYM5|9205|zinc finger, MYM-type 5##NM_001142684|ZMYM5|9205|zinc finger, MYM-type 5##AK312724|ZMYM5|9205|zinc finger, MYM-type 5##BC007048|ZMYM5|9205|zinc finger, MYM-type 5##AJ133352|ZMYM5|9205|zinc finger, MYM-type 5##AJ133353|ZMYM5|9205|zinc finger, MYM-type 5##AJ133354|ZMYM5|9205|zinc finger, MYM-type 5##AJ133355|ZMYM5|9205|zinc finger, MYM-type 5##NM_001042414|PSPC1|55269|paraspeckle component 1##BC036372|ZMYM2|7750|zinc finger, MYM-type 2##NM_003453|ZMYM2|7750|zinc finger, MYM-type 2##NM_197968|ZMYM2|7750|zinc finger, MYM-type 2##AL136621|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190964|ZMYM2|7750|zinc finger, MYM-type 2##Y13472|ZMYM2|7750|zinc finger, MYM-type 2##AK226118|ZMYM2|7750|zinc finger, MYM-type 2##AK289741|ZMYM2|7750|zinc finger, MYM-type 2##AJ224901|ZMYM2|7750|zinc finger, MYM-type 2##BX647944|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190965|ZMYM2|7750|zinc finger, MYM-type 2	0.698889	CTCF.p2:0:0.699
chr17	77818702	77818825	reg1019553.p1	7.218	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	-5621	-	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-47856	-	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	-66782	+	BC044939 TSC_hg19_v1_chr17_+_77893233	74436	+	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	190839	-	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	191685	+	AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40	0.146121	
chr5	143347724	143347864	reg1018203.p2	7.218	+	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	-156036	+	NM_001018074 NM_001018075 NM_001018077	-532718	-	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-563628	-	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	202341	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	202382	-	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	202452	-	AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5	0.970819	CTCF.p2:-8:0.971
chr6_ssto_hap7	4839346	4839459	reg1016861.p2	7.218	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.734401	CTCF.p2:0:0.734
chr1	233161066	233161194	reg1018706.p2	7.217	+	TSC_hg19_v1_chr1_+_233086381 AF416713	-74741	+	AK311229 AK316591 TSC_hg19_v1_chr1_+_233086356 BC005102 NM_032324	-74786	+	AK290216 TSC_hg19_v1_chr1_+_232941173 BC036663 AB037804	-219979	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	270353	-	AJ311797 AJ311798 NM_032435 BC136648 BC136649	302453	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	588693	+	AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK311229|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK316591|NTPCR|84284|nucleoside-triphosphatase, cancer-related##BC005102|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_032324|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK290216|KIAA1383|54627|KIAA1383##BC036663|KIAA1383|54627|KIAA1383##AB037804|KIAA1383|54627|KIAA1383##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1	0.996922	CTCF.p2:0:0.997
chr20	32843541	32843661	reg1017634.p1	7.217	+	TSC_hg19_v1_chr20_-_32700082 NM_003908	-143516	-	AB451237 AB451362 BT009795 CR456734 CU674464 AB590122 TSC_hg19_v1_chr20_-_32700021 AB208966 M29536 BC107588 BC000934 AK313025 BC000461	-143605	-	AK291079 TSC_hg19_v1_chr20_+_32581883 AK291054	-261718	+	NM_001672 BC104238 BC104239	4573	+	BT006697 CU679982 DQ890569 DQ891701 DQ893730 DQ895397 TSC_hg19_v1_chr20_-_32891162 M61832 M61831 BC010018 BC011606 AK300014 AK316180 AK290422 AK309204 NM_000687	47543	-	AK097610 NM_001161766	56006	-	NM_003908|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB451237|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB451362|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BT009795|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##CR456734|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB208966|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##M29536|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC107588|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000934|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AK313025|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000461|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AK291079|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK291054|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##NM_001672|ASIP|434|agouti signaling protein##BC104238|ASIP|434|agouti signaling protein##BC104239|ASIP|434|agouti signaling protein##BT006697|AHCY|191|adenosylhomocysteinase##DQ890569|AHCY|191|adenosylhomocysteinase##DQ891701|AHCY|191|adenosylhomocysteinase##DQ893730|AHCY|191|adenosylhomocysteinase##DQ895397|AHCY|191|adenosylhomocysteinase##M61832|AHCY|191|adenosylhomocysteinase##M61831|AHCY|191|adenosylhomocysteinase##BC010018|AHCY|191|adenosylhomocysteinase##BC011606|AHCY|191|adenosylhomocysteinase##AK300014|AHCY|191|adenosylhomocysteinase##AK316180|AHCY|191|adenosylhomocysteinase##AK290422|AHCY|191|adenosylhomocysteinase##AK309204|AHCY|191|adenosylhomocysteinase##NM_000687|AHCY|191|adenosylhomocysteinase##AK097610|AHCY|191|adenosylhomocysteinase##NM_001161766|AHCY|191|adenosylhomocysteinase	0.529021	CTCF.p2:-30:0.529
chr6_qbl_hap6	4591356	4591471	reg1016996.p2	7.217	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.734401	CTCF.p2:0:0.734
chr2	189389396	189389487	reg1017876.p2	7.216	+	TSC_hg19_v1_chr2_+_189157557 BC068525 AF191771 AF200715 AF075014	-231860	+	TSC_hg19_v1_chr2_+_189156740 AK298626	-232693	+	TSC_hg19_v1_chr2_+_189156656 BC001103	-232779	+	AY039011 NM_052952	265389	-	TSC_hg19_v1_chr2_+_189839098 AK308010 NM_000090 BC028178	449653	+	X14420 BX649097 TSC_hg19_v1_chr2_+_189839117	449677	+	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AK298626|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##BC001103|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AY039011|DIRC1|116093|disrupted in renal carcinoma 1##NM_052952|DIRC1|116093|disrupted in renal carcinoma 1##AK308010|COL3A1|1281|collagen, type III, alpha 1##NM_000090|COL3A1|1281|collagen, type III, alpha 1##BC028178|COL3A1|1281|collagen, type III, alpha 1##X14420|COL3A1|1281|collagen, type III, alpha 1	0.996178	CTCF.p2:0:0.996
chr5	126015373	126015485	reg1020053.p1	7.216	+	BC130495 BC130497 AK131015 NM_207408 HQ258080	-48014	+	AK023255 NM_032177 TSC_hg19_v1_chr5_+_125936641 BC021161 AK024065 AK298497 AK225464 CR457305 DQ893213 DQ896542	-78797	+	TSC_hg19_v1_chr5_-_125930891 AB489160 EU831757 EU831835 S74728 BC073174 BC071712 AK295526 BC002515 AK312459 AK297365 NM_001182 NM_001201377 NM_001202404	-84573	-	NM_005573 BC052951	96886	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	97402	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	97453	+	BC130495|C5orf48|389320|chromosome 5 open reading frame 48##BC130497|C5orf48|389320|chromosome 5 open reading frame 48##AK131015|C5orf48|389320|chromosome 5 open reading frame 48##NM_207408|C5orf48|389320|chromosome 5 open reading frame 48##HQ258080|C5orf48|389320|chromosome 5 open reading frame 48##AK023255|PHAX|51808|phosphorylated adaptor for RNA export##NM_032177|PHAX|51808|phosphorylated adaptor for RNA export##BC021161|PHAX|51808|phosphorylated adaptor for RNA export##AK024065|PHAX|51808|phosphorylated adaptor for RNA export##AK298497|PHAX|51808|phosphorylated adaptor for RNA export##AK225464|PHAX|51808|phosphorylated adaptor for RNA export##CR457305|PHAX|51808|phosphorylated adaptor for RNA export##DQ893213|PHAX|51808|phosphorylated adaptor for RNA export##DQ896542|PHAX|51808|phosphorylated adaptor for RNA export##EU831757|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##EU831835|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##S74728|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC073174|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC071712|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK295526|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC002515|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK312459|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK297365|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001182|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001201377|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001202404|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_005573|LMNB1|4001|lamin B1##BC052951|LMNB1|4001|lamin B1##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1##AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1	0.03724	
chr10	102826401	102826497	reg1018701.p1	7.215	+	TSC_hg19_v1_chr10_+_102821745 BC007758 AY359087 AK225949 AK172862	-4790	+	TSC_hg19_v1_chr10_+_102820998 AK172864 NM_030929	-5471	+	TSC_hg19_v1_chr10_+_102792167 AK299405 BC000124	-34260	+	BC019674 NM_001085398	64453	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	64729	+	BC136321 BC069156 NM_006562 X90828	162253	-	BC007758|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AY359087|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK225949|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172862|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172864|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##NM_030929|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK299405|SFXN3|81855|sideroflexin 3##BC000124|SFXN3|81855|sideroflexin 3##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1	0.029051	
chr12	101963930	101964033	reg1018911.p2	7.215	+	TSC_hg19_v1_chr12_-_101801573 AK311793 AK302911 AK299062 BC007000 BX537387 NM_001177	-162438	-	TSC_hg19_v1_chr12_+_101673904 NM_014503 AK307934 AJ006778	-290076	+	AK313788 AF536216 AY081220 NM_145913	-359982	-	AK296681 NM_002465 NM_206819 NM_206820 NM_206821 AK056587 AK292976 AK295727 AK303401 BC015187 BC030980 BC065720 TSC_hg19_v1_chr12_+_101988748 BC092418 X66276 X73114 AL831993 AL832000 AL832332 AL832350 AL832354 AL832456 BC117217 BC143495 BC143502 BC143503 BC143504 AL834249 BX649073 AB385254 AM392734 EU831907 EU832001	24815	+	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	127641	+	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	169238	-	AK311793|ARL1|400|ADP-ribosylation factor-like 1##AK302911|ARL1|400|ADP-ribosylation factor-like 1##AK299062|ARL1|400|ADP-ribosylation factor-like 1##BC007000|ARL1|400|ADP-ribosylation factor-like 1##BX537387|ARL1|400|ADP-ribosylation factor-like 1##NM_001177|ARL1|400|ADP-ribosylation factor-like 1##NM_014503|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK307934|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AJ006778|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK313788|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AF536216|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AY081220|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_145913|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AK296681|MYBPC1|4604|myosin binding protein C, slow type##NM_002465|MYBPC1|4604|myosin binding protein C, slow type##NM_206819|MYBPC1|4604|myosin binding protein C, slow type##NM_206820|MYBPC1|4604|myosin binding protein C, slow type##NM_206821|MYBPC1|4604|myosin binding protein C, slow type##AK056587|MYBPC1|4604|myosin binding protein C, slow type##AK292976|MYBPC1|4604|myosin binding protein C, slow type##AK295727|MYBPC1|4604|myosin binding protein C, slow type##AK303401|MYBPC1|4604|myosin binding protein C, slow type##BC015187|MYBPC1|4604|myosin binding protein C, slow type##BC030980|MYBPC1|4604|myosin binding protein C, slow type##BC065720|MYBPC1|4604|myosin binding protein C, slow type##BC092418|MYBPC1|4604|myosin binding protein C, slow type##X66276|MYBPC1|4604|myosin binding protein C, slow type##X73114|MYBPC1|4604|myosin binding protein C, slow type##AL831993|MYBPC1|4604|myosin binding protein C, slow type##AL832000|MYBPC1|4604|myosin binding protein C, slow type##AL832332|MYBPC1|4604|myosin binding protein C, slow type##AL832350|MYBPC1|4604|myosin binding protein C, slow type##AL832354|MYBPC1|4604|myosin binding protein C, slow type##AL832456|MYBPC1|4604|myosin binding protein C, slow type##BC117217|MYBPC1|4604|myosin binding protein C, slow type##BC143495|MYBPC1|4604|myosin binding protein C, slow type##BC143502|MYBPC1|4604|myosin binding protein C, slow type##BC143503|MYBPC1|4604|myosin binding protein C, slow type##BC143504|MYBPC1|4604|myosin binding protein C, slow type##AL834249|MYBPC1|4604|myosin binding protein C, slow type##BX649073|MYBPC1|4604|myosin binding protein C, slow type##AM392734|MYBPC1|4604|myosin binding protein C, slow type##EU831907|MYBPC1|4604|myosin binding protein C, slow type##EU832001|MYBPC1|4604|myosin binding protein C, slow type##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3	0.983244	CTCF.p2:-15:0.983
chr14	105190000	105190125	reg1018061.p1	7.215	+	TSC_hg19_v1_chr14_+_105173955 DQ395338 DQ395339 DQ395340	-15965	+	TSC_hg19_v1_chr14_+_105155954 NM_001031714 NM_022489 NM_032714 AK290083 BC006173 BX248757	-34178	+	TSC_hg19_v1_chr14_+_105147469 BC035345	-42600	+	BC047904 NM_152328 AK095921 AY037159 TSC_hg19_v1_chr14_+_105190565 BX248286 CU690530	507	+	BC032039 NM_199165 AK096720	6165	+	TSC_hg19_v1_chr14_+_105219483 NM_006427 NM_021709 AK223332 AK316550 BC034562	29426	+	DQ395338|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395339|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395340|INF2|64423|inverted formin, FH2 and WH2 domain containing##NM_001031714|INF2|64423|inverted formin, FH2 and WH2 domain containing##NM_022489|INF2|64423|inverted formin, FH2 and WH2 domain containing##NM_032714|INF2|64423|inverted formin, FH2 and WH2 domain containing##AK290083|INF2|64423|inverted formin, FH2 and WH2 domain containing##BC006173|INF2|64423|inverted formin, FH2 and WH2 domain containing##BX248757|INF2|64423|inverted formin, FH2 and WH2 domain containing##BC047904|ADSSL1|122622|adenylosuccinate synthase like 1##NM_152328|ADSSL1|122622|adenylosuccinate synthase like 1##AK095921|ADSSL1|122622|adenylosuccinate synthase like 1##AY037159|ADSSL1|122622|adenylosuccinate synthase like 1##BX248286|ADSSL1|122622|adenylosuccinate synthase like 1##BC032039|ADSSL1|122622|adenylosuccinate synthase like 1##NM_199165|ADSSL1|122622|adenylosuccinate synthase like 1##AK096720|ADSSL1|122622|adenylosuccinate synthase like 1##NM_006427|SIVA1|10572|SIVA1, apoptosis-inducing factor##NM_021709|SIVA1|10572|SIVA1, apoptosis-inducing factor##AK223332|SIVA1|10572|SIVA1, apoptosis-inducing factor##AK316550|SIVA1|10572|SIVA1, apoptosis-inducing factor##BC034562|SIVA1|10572|SIVA1, apoptosis-inducing factor	0.98883	CTCF.p2:6:0.989
chr4	17326104	17326246	reg1018218.p1	7.215	+	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	-425790	-	AK226029 TSC_hg19_v1_chr4_-_16900258	-425916	-	AK300119 AB463834 DQ891981 DQ895171 AK312881 TSC_hg19_v1_chr4_-_16900210 AF068651 AF047337 AF064492 AF064493 BC034019	-426049	-	AB528218 AM393718 DQ891926 DQ895113 CU674280 TSC_hg19_v1_chr4_-_17513714 X04882 BC000576 AK124382 AK296622 AK223437 AK289773 NM_000320	187591	-	BC127863 NM_001079827	190612	+	TSC_hg19_v1_chr4_+_17578852 NM_015907	252707	+	AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2##AK226029|LDB2|9079|LIM domain binding 2##AK300119|LDB2|9079|LIM domain binding 2##DQ891981|LDB2|9079|LIM domain binding 2##DQ895171|LDB2|9079|LIM domain binding 2##AK312881|LDB2|9079|LIM domain binding 2##AF068651|LDB2|9079|LIM domain binding 2##AF047337|LDB2|9079|LIM domain binding 2##AF064492|LDB2|9079|LIM domain binding 2##AF064493|LDB2|9079|LIM domain binding 2##BC034019|LDB2|9079|LIM domain binding 2##AM393718|QDPR|5860|quinoid dihydropteridine reductase##DQ891926|QDPR|5860|quinoid dihydropteridine reductase##DQ895113|QDPR|5860|quinoid dihydropteridine reductase##X04882|QDPR|5860|quinoid dihydropteridine reductase##BC000576|QDPR|5860|quinoid dihydropteridine reductase##AK124382|QDPR|5860|quinoid dihydropteridine reductase##AK296622|QDPR|5860|quinoid dihydropteridine reductase##AK223437|QDPR|5860|quinoid dihydropteridine reductase##AK289773|QDPR|5860|quinoid dihydropteridine reductase##NM_000320|QDPR|5860|quinoid dihydropteridine reductase##BC127863|CLRN2|645104|clarin 2##NM_001079827|CLRN2|645104|clarin 2##NM_015907|LAP3|51056|leucine aminopeptidase 3	0.318143	CTCF.p2:18:0.318
chr1	51395191	51395316	reg1022692.p1	7.214	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	-506142	-	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-819715	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-820569	+	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	30324	-	TSC_hg19_v1_chr1_-_51425740 BC067100	30503	-	TSC_hg19_v1_chr1_-_51425796 AJ271408	30546	-	NM_032110|DMRTA2|63950|DMRT-like family A2##AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1##AJ271408|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.883594	CTCF.p2:-5:0.884
chr17	6814432	6814581	reg1019809.p1	7.214	+	AF357879 AK292818 AK304345 BC014599 NM_053285	-79473	-	NM_153230 BC034782	-134945	+	BC073156 TSC_hg19_v1_chr17_+_6659364 AK292710 AK292848 BC032776 BC058017 EF028165 EF028166 X99699	-155128	+	M62982 NM_000697 M35418 M58704 BC069557 AB590844	84901	+	NM_001004333	101229	+	AK289930 TSC_hg19_v1_chr17_+_6915955 BC036317 BC051802 BC062705 BC095436 AM746459	101454	+	AF357879|TEKT1|83659|tektin 1##AK292818|TEKT1|83659|tektin 1##AK304345|TEKT1|83659|tektin 1##BC014599|TEKT1|83659|tektin 1##NM_053285|TEKT1|83659|tektin 1##NM_153230|FBXO39|162517|F-box protein 39##BC034782|FBXO39|162517|F-box protein 39##BC073156|XAF1|54739|XIAP associated factor 1##AK292710|XAF1|54739|XIAP associated factor 1##AK292848|XAF1|54739|XIAP associated factor 1##BC032776|XAF1|54739|XIAP associated factor 1##BC058017|XAF1|54739|XIAP associated factor 1##EF028165|XAF1|54739|XIAP associated factor 1##EF028166|XAF1|54739|XIAP associated factor 1##X99699|XAF1|54739|XIAP associated factor 1##M62982|ALOX12|239|arachidonate 12-lipoxygenase##NM_000697|ALOX12|239|arachidonate 12-lipoxygenase##M35418|ALOX12|239|arachidonate 12-lipoxygenase##M58704|ALOX12|239|arachidonate 12-lipoxygenase##BC069557|ALOX12|239|arachidonate 12-lipoxygenase##NM_001004333|RNASEK|440400|ribonuclease, RNase K##AK289930|RNASEK|440400|ribonuclease, RNase K##BC036317|RNASEK|440400|ribonuclease, RNase K##BC051802|RNASEK|440400|ribonuclease, RNase K##BC062705|RNASEK|440400|ribonuclease, RNase K##BC095436|RNASEK|440400|ribonuclease, RNase K##AM746459|RNASEK|440400|ribonuclease, RNase K	0.05091	
chr4	93012627	93012741	reg1018760.p2	7.214	+	BC051694 NM_207491	-1856503	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-1963966	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-2196622	+	AB209318 NM_001510 AK308611	212908	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	1737377	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	2116127	+	BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.505153	CTCF.p2:-3:0.505
chr6	139571849	139571978	reg1019712.p1	7.214	+	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	-115657	+	TSC_hg19_v1_chr6_+_139349935 AK309402 AF116682 BC014953	-221995	+	NM_021243 AF161398 TSC_hg19_v1_chr6_+_139349850	-222076	+	TSC_hg19_v1_chr6_-_139613136 BX647633 AL834248 AL831988 AK314725 BX647477 BC115383 BC115384 AB085905 NM_153235	41247	-	NM_001168389 NM_001168388	123510	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	123848	-	BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)##AF116682|C6orf115|58527|chromosome 6 open reading frame 115##BC014953|C6orf115|58527|chromosome 6 open reading frame 115##NM_021243|C6orf115|58527|chromosome 6 open reading frame 115##AF161398|C6orf115|58527|chromosome 6 open reading frame 115##BX647633|TXLNB|167838|taxilin beta##AL834248|TXLNB|167838|taxilin beta##AL831988|TXLNB|167838|taxilin beta##AK314725|TXLNB|167838|taxilin beta##BX647477|TXLNB|167838|taxilin beta##BC115383|TXLNB|167838|taxilin beta##BC115384|TXLNB|167838|taxilin beta##AB085905|TXLNB|167838|taxilin beta##NM_153235|TXLNB|167838|taxilin beta##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	0.0	
chr12	132314970	132315097	reg1019766.p1	7.213	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	-2067	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	-119377	+	TSC_hg19_v1_chr12_+_132195623 BC142980	-119420	+	TSC_hg19_v1_chr12_+_132379266 AF045458 NM_003565	64240	+	TSC_hg19_v1_chr12_+_132413775 NM_001002020 AK292242	98726	+	TSC_hg19_v1_chr12_+_132413820 NM_001002019 AK074659 NM_025215 BC035964 AF318369 BC002901	98772	+	BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AF045458|ULK1|8408|unc-51-like kinase 1 (C. elegans)##NM_003565|ULK1|8408|unc-51-like kinase 1 (C. elegans)##NM_001002020|PUS1|80324|pseudouridylate synthase 1##AK292242|PUS1|80324|pseudouridylate synthase 1##NM_001002019|PUS1|80324|pseudouridylate synthase 1##AK074659|PUS1|80324|pseudouridylate synthase 1##NM_025215|PUS1|80324|pseudouridylate synthase 1##BC035964|PUS1|80324|pseudouridylate synthase 1##AF318369|PUS1|80324|pseudouridylate synthase 1##BC002901|PUS1|80324|pseudouridylate synthase 1	0.764681	CTCF.p2:25:0.765
chr2	217741926	217742056	reg1022279.p1	7.213	+	BC029516 NM_003284	-17210	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-181731	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-182425	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	1066790	-	AK001785 TSC_hg19_v1_chr2_-_218843551	1101555	-	TSC_hg19_v1_chr2_-_218867719 AK309785	1125732	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.021112	
chr5	59837408	59837588	reg1018072.p2	7.213	+	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	-53458	+	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	-53594	-	NM_001104631	-647878	-	TSC_hg19_v1_chr5_-_59995928 AF490257	158418	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	158467	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	302573	-	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF490257|DEPDC1B|55789|DEP domain containing 1B##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7	0.0	
chr5	76788328	76788472	reg1018368.p2	7.213	+	TSC_hg19_v1_chr5_-_76788333 AK001766 BC001807 NM_018268	-85	-	AK296423 AK300058 TSC_hg19_v1_chr5_-_76788142 AK021855	-255	-	TSC_hg19_v1_chr5_-_76788048 AK293316 AK295249 CU691838 AK304329 AK023977 AF115511 BC040241	-334	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	146029	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	146114	-	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	283732	-	AK001766|WDR41|55255|WD repeat domain 41##BC001807|WDR41|55255|WD repeat domain 41##NM_018268|WDR41|55255|WD repeat domain 41##AK296423|WDR41|55255|WD repeat domain 41##AK300058|WDR41|55255|WD repeat domain 41##AK021855|WDR41|55255|WD repeat domain 41##AK293316|WDR41|55255|WD repeat domain 41##AK295249|WDR41|55255|WD repeat domain 41##AK304329|WDR41|55255|WD repeat domain 41##AK023977|WDR41|55255|WD repeat domain 41##AF115511|WDR41|55255|WD repeat domain 41##BC040241|WDR41|55255|WD repeat domain 41##EU446696|OTP|23440|orthopedia homeobox##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A	0.933546	CTCF.p2:-8:0.934
chr6	36945260	36945401	reg1018197.p1	7.213	+	BC035634 NM_153370	-23122	+	NM_001199159	-29292	+	NM_152734 AJ420498 TSC_hg19_v1_chr6_+_36853727 BC095423 AK172780 AK315984 BC105947 BC107489 BC105946 BX538108 AK300351 AY358637 BX647220 BC023605	-91620	+	TSC_hg19_v1_chr6_-_36953911 BC006507 CU674346 CU691916 AF151822 AK303318 BC000702 BC040659 AF189289 AY947344	8452	-	TSC_hg19_v1_chr6_-_36953924 BC009962 AK225628	8596	-	TSC_hg19_v1_chr6_-_36953944 BC125056	8613	-	BC035634|PI16|221476|peptidase inhibitor 16##NM_153370|PI16|221476|peptidase inhibitor 16##NM_001199159|PI16|221476|peptidase inhibitor 16##NM_152734|C6orf89|221477|chromosome 6 open reading frame 89##AJ420498|C6orf89|221477|chromosome 6 open reading frame 89##BC095423|C6orf89|221477|chromosome 6 open reading frame 89##AK172780|C6orf89|221477|chromosome 6 open reading frame 89##AK315984|C6orf89|221477|chromosome 6 open reading frame 89##BC105947|C6orf89|221477|chromosome 6 open reading frame 89##BC107489|C6orf89|221477|chromosome 6 open reading frame 89##BC105946|C6orf89|221477|chromosome 6 open reading frame 89##BX538108|C6orf89|221477|chromosome 6 open reading frame 89##AK300351|C6orf89|221477|chromosome 6 open reading frame 89##AY358637|C6orf89|221477|chromosome 6 open reading frame 89##BX647220|C6orf89|221477|chromosome 6 open reading frame 89##BC023605|C6orf89|221477|chromosome 6 open reading frame 89##BC006507|MTCH1|23787|mitochondrial carrier 1##AF151822|MTCH1|23787|mitochondrial carrier 1##AK303318|MTCH1|23787|mitochondrial carrier 1##BC000702|MTCH1|23787|mitochondrial carrier 1##BC040659|MTCH1|23787|mitochondrial carrier 1##AF189289|MTCH1|23787|mitochondrial carrier 1##AY947344|MTCH1|23787|mitochondrial carrier 1##BC009962|MTCH1|23787|mitochondrial carrier 1##AK225628|MTCH1|23787|mitochondrial carrier 1##BC125056|MTCH1|23787|mitochondrial carrier 1	0.953563	CTCF.p2:9:0.954
chr1	116012421	116012538	reg1019255.p1	7.212	+	BC032517 NM_002506 X52599	-131626	-	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	-380363	-	NM_000549	-440065	+	NM_001172411 NM_138959 BC065272 AF481859	172113	+	AB057596 NM_001172412	172770	+	CU692536 DQ893219 DQ896548 D55655 AK225959 TSC_hg19_v1_chr1_-_116311307	298755	-	BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##NM_000549|TSHB|7252|thyroid stimulating hormone, beta##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##DQ893219|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ896548|CASQ2|845|calsequestrin 2 (cardiac muscle)##D55655|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK225959|CASQ2|845|calsequestrin 2 (cardiac muscle)	0.810891	CTCF.p2:11:0.760
chr19	14225712	14225842	reg1019078.p1	7.212	+	TSC_hg19_v1_chr19_-_14224999 AF208004 AF224718 NM_207518 AK292284 AF239744	-723	-	TSC_hg19_v1_chr19_-_14201272 AY453840 NM_138352	-24501	-	NM_001145028	-55807	-	AB528630 X07767 TSC_hg19_v1_chr19_-_14228549 BC039846 BC108259 NM_002730	2683	-	TSC_hg19_v1_chr19_-_14228563 AK290147	2792	-	AB104486 AB463417 CR457235 GQ129346 GQ129347 AF279307 BC007726 BC010014 BC002518 TSC_hg19_v1_chr19_-_14247395 AK223080 AK001288	21555	-	AF208004|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF224718|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##NM_207518|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AK292284|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF239744|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AY453840|SAMD1|90378|sterile alpha motif domain containing 1##NM_138352|SAMD1|90378|sterile alpha motif domain containing 1##NM_001145028|PALM3|342979|paralemmin 3##X07767|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##BC039846|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##BC108259|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##NM_002730|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AK290147|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AB104486|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##CR457235|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##GQ129346|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##GQ129347|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AF279307|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC007726|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC010014|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK223080|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK001288|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	0.942379	CTCF.p2:5:0.942
chr21	40508217	40508331	reg1020069.p1	7.212	+	TSC_hg19_v1_chr21_+_40177852 NM_005239 BC042954 AK315563 BC017040	-330397	+	J04102 TSC_hg19_v1_chr21_+_40177830	-330477	+	AY204740 AY204741 AY204742 AY204743 NM_001243432 TSC_hg19_v1_chr21_-_40033677 AK297807 NM_001136154 NM_004449	-474614	-	CU678538 AB451468 AF417108 AY463963 CR541821 CR541852 DQ892311 DQ895511 TSC_hg19_v1_chr21_-_40555337	47048	-	TSC_hg19_v1_chr21_-_40555341 AK315406	47066	-	TSC_hg19_v1_chr21_-_40555343 BC010424 BC003619 BC011755 BC012809 AJ006291 AK001455 AK308614 NM_003720 NM_203433	47127	-	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##J04102|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AY204740|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204741|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204742|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204743|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243432|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK297807|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136154|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_004449|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AB451468|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AF417108|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AY463963|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541821|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541852|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ892311|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ895511|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AK315406|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC010424|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC003619|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC011755|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC012809|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AJ006291|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AK001455|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AK308614|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##NM_003720|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##NM_203433|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1	0.714659	CTCF.p2:0:0.715
chr2	144444238	144444385	reg1018312.p1	7.212	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	-557320	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	-557381	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-809071	+	NM_024659	550594	-	AY281366 NM_001006636	607748	-	BC017741 AK291357 TSC_hg19_v1_chr2_-_145090037 BC061699	645721	-	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1##AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1##BC017741|GTDC1|79712|glycosyltransferase-like domain containing 1##AK291357|GTDC1|79712|glycosyltransferase-like domain containing 1##BC061699|GTDC1|79712|glycosyltransferase-like domain containing 1	0.44438	CTCF.p2:11:0.444
chr3	57213746	57213858	reg1021077.p1	7.211	+	AF494208 NM_017563 TSC_hg19_v1_chr3_-_57199413	-14392	-	AF458067 TSC_hg19_v1_chr3_-_57199347	-14469	-	AF433662 AK302493 NM_001128615	-100489	-	NM_003865	20477	-	TSC_hg19_v1_chr3_+_57261766 BC028599 NM_012096	47945	+	AK299008 TSC_hg19_v1_chr3_+_57261776	47974	+	AF494208|IL17RD|54756|interleukin 17 receptor D##NM_017563|IL17RD|54756|interleukin 17 receptor D##AF458067|IL17RD|54756|interleukin 17 receptor D##AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_003865|HESX1|8820|HESX homeobox 1##BC028599|APPL1|26060|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1##NM_012096|APPL1|26060|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1##AK299008|APPL1|26060|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1	0.379664	CTCF.p2:1:0.380
chr6	12075560	12075679	reg1018306.p2	7.211	+	NM_002114	-62896	+	NM_001143948 NM_032744	-296340	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-537121	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	214974	+	TSC_hg19_v1_chr6_+_12514301 D28417	438683	+	AK295263 TSC_hg19_v1_chr6_+_12716998	641324	+	NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1	0.0	
chr1	145219808	145219915	reg1018511.p1	7.210	+	TSC_hg19_v1_chr1_+_145209107 NM_203458 BC010154 AK075065 BC090943 BC019835 AK092351 AK098372 AX747492 BC065219 AK293876 BC084572	-10740	+	TSC_hg19_v1_chr1_+_145096519 CU674670 DQ892584 DQ895801	-123329	+	TSC_hg19_v1_chr1_+_145096446 NM_004892 AK289875 BC001364 AF047442	-123425	+	AY894562 AY894570 NM_001039703	73440	+	NM_145277 NM_202004 NM_213652 NM_213653 AK223575 AK092682 AK315852 AX747669 BC017926 AK096905 AK290831 AK292742 AK092692 AK124273 AX747673 BC085604	193402	+	TSC_hg19_v1_chr1_+_145438489 NM_006472 AK301203 BX537824 AK226090 S73591 BC093702 BC093704 AB527234 AY594328 BC024305 AK301148	218815	+	NM_203458|NOTCH2NL|388677|notch 2 N-terminal like##BC010154|NOTCH2NL|388677|notch 2 N-terminal like##AK075065|NOTCH2NL|388677|notch 2 N-terminal like##BC090943|NOTCH2NL|388677|notch 2 N-terminal like##BC019835|NOTCH2NL|388677|notch 2 N-terminal like##BC065219|NOTCH2NL|388677|notch 2 N-terminal like##BC084572|NOTCH2NL|388677|notch 2 N-terminal like##DQ892584|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##DQ895801|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##NM_004892|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AK289875|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##BC001364|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AF047442|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8##NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10##NM_145277|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_202004|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213652|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213653|HFE2|148738|hemochromatosis type 2 (juvenile)##AK223575|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092682|HFE2|148738|hemochromatosis type 2 (juvenile)##AK315852|HFE2|148738|hemochromatosis type 2 (juvenile)##BC017926|HFE2|148738|hemochromatosis type 2 (juvenile)##AK096905|HFE2|148738|hemochromatosis type 2 (juvenile)##AK290831|HFE2|148738|hemochromatosis type 2 (juvenile)##AK292742|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092692|HFE2|148738|hemochromatosis type 2 (juvenile)##AK124273|HFE2|148738|hemochromatosis type 2 (juvenile)##BC085604|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_006472|TXNIP|10628|thioredoxin interacting protein##AK301203|TXNIP|10628|thioredoxin interacting protein##BX537824|TXNIP|10628|thioredoxin interacting protein##AK226090|TXNIP|10628|thioredoxin interacting protein##S73591|TXNIP|10628|thioredoxin interacting protein##BC093702|TXNIP|10628|thioredoxin interacting protein##BC093704|TXNIP|10628|thioredoxin interacting protein##AY594328|TXNIP|10628|thioredoxin interacting protein##BC024305|TXNIP|10628|thioredoxin interacting protein##AK301148|TXNIP|10628|thioredoxin interacting protein	0.187352	
chr1	1720603	1720729	reg1020634.p1	7.209	+	TSC_hg19_v1_chr1_-_1711471 AF250320 NM_001198994	-9186	-	BC001709 TSC_hg19_v1_chr1_-_1710295 AK291599 NM_001198993	-10397	-	TSC_hg19_v1_chr1_-_1709864 AK291728 AK290161 AK023114 NM_023018	-10780	-	TSC_hg19_v1_chr1_-_1822437 BC004186 X04526 AK295607 BC140714 BC171773	101786	-	TSC_hg19_v1_chr1_-_1822496 BC008991	101829	-	AK312614 TSC_hg19_v1_chr1_-_1822502	101836	-	AF250320|NADK|65220|NAD kinase##NM_001198994|NADK|65220|NAD kinase##BC001709|NADK|65220|NAD kinase##AK291599|NADK|65220|NAD kinase##NM_001198993|NADK|65220|NAD kinase##AK291728|NADK|65220|NAD kinase##AK290161|NADK|65220|NAD kinase##AK023114|NADK|65220|NAD kinase##NM_023018|NADK|65220|NAD kinase##BC004186|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##X04526|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##BC140714|CDK11B|984|cyclin-dependent kinase 11B##BC171773|CDK11B|984|cyclin-dependent kinase 11B##BC008991|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##AK312614|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1	0.877614	CTCF.p2:-5:0.878
chr20	52824286	52824409	reg1019560.p1	7.209	+	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	-33827	-	AK315220 NM_003657	-137044	-	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	-137285	-	TSC_hg19_v1_chr20_+_52824396 NM_002623	100	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	290	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	267867	+	L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##NM_002623|PFDN4|5203|prefoldin subunit 4##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5	0.741885	CTCF.p2:11:0.742
chr2	241922914	241923030	reg1019792.p1	7.209	+	AK056601 NM_001085437	-87400	-	BC125154 BC125155 AK026324 NM_024861 AK096434	-91553	-	NM_000030 X53414 BC132819 D13368 S71388 AK315331 TSC_hg19_v1_chr2_+_241808251 AK292754 AK298420 AB292648 X56092 AF348451 AK298400 AK316495	-114704	+	NM_001080437	15282	+	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	118754	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	165899	-	AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54##NM_000030|AGXT|189|alanine-glyoxylate aminotransferase##X53414|AGXT|189|alanine-glyoxylate aminotransferase##BC132819|AGXT|189|alanine-glyoxylate aminotransferase##D13368|AGXT|189|alanine-glyoxylate aminotransferase##AK315331|AGXT|189|alanine-glyoxylate aminotransferase##AK292754|AGXT|189|alanine-glyoxylate aminotransferase##AK298420|AGXT|189|alanine-glyoxylate aminotransferase##AB292648|AGXT|189|alanine-glyoxylate aminotransferase##X56092|AGXT|189|alanine-glyoxylate aminotransferase##AF348451|AGXT|189|alanine-glyoxylate aminotransferase##AK298400|AGXT|189|alanine-glyoxylate aminotransferase##AK316495|AGXT|189|alanine-glyoxylate aminotransferase##NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase	0.100106	
chr15	50608359	50608505	reg1020187.p2	7.208	+	AK308833 NM_002112	-50271	-	TSC_hg19_v1_chr15_+_50474425 AK290262 NM_001159629 NM_003645 AF096290 AK222859 D88308 AK223145 BC057770 CU691220	-133942	+	TSC_hg19_v1_chr15_-_50411492 BC144298 BC144297 NM_024837	-196966	-	TSC_hg19_v1_chr15_-_50647062 BC068063 BC009935 AK000900	38637	-	TSC_hg19_v1_chr15_+_50647161 BC014238 BC004103	38728	+	TSC_hg19_v1_chr15_-_50647316 BC016910 D13316 BC050702 AK303901	38868	-	AK308833|HDC|3067|histidine decarboxylase##NM_002112|HDC|3067|histidine decarboxylase##AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC068063|FLJ10038|55056|uncharacterized protein FLJ10038##BC009935|FLJ10038|55056|uncharacterized protein FLJ10038##AK000900|FLJ10038|55056|uncharacterized protein FLJ10038##BC014238|LOC100129387|100129387|uncharacterized LOC100129387##BC004103|LOC100129387|100129387|uncharacterized LOC100129387##BC016910|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##D13316|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##BC050702|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##AK303901|GABPB1|2553|GA binding protein transcription factor, beta subunit 1	0.560773	CTCF.p2:14:0.561
chr6	33359128	33359244	reg1017834.p2	7.208	+	BC109073 BC109074 TSC_hg19_v1_chr6_-_33290737 AK309612 AB015051 AF050179 BC073776 AF039136 AK303767 AK313034 AK303854 AK223404 AK292187 NM_001141969 NM_001141970 NM_001350	-68451	-	AK315747 NM_001145338	-73468	-	BC018541 NM_005453 TSC_hg19_v1_chr6_-_33285522	-73671	-	NM_002263	126	+	TSC_hg19_v1_chr6_+_33359599 AJ010479	401	+	BC000712 TSC_hg19_v1_chr6_+_33359612 BC073878	425	+	BC109073|DAXX|1616|death-domain associated protein##BC109074|DAXX|1616|death-domain associated protein##AK309612|DAXX|1616|death-domain associated protein##AF050179|DAXX|1616|death-domain associated protein##BC073776|DAXX|1616|death-domain associated protein##AF039136|DAXX|1616|death-domain associated protein##AK303767|DAXX|1616|death-domain associated protein##AK313034|DAXX|1616|death-domain associated protein##AK303854|DAXX|1616|death-domain associated protein##AK223404|DAXX|1616|death-domain associated protein##AK292187|DAXX|1616|death-domain associated protein##NM_001141969|DAXX|1616|death-domain associated protein##NM_001141970|DAXX|1616|death-domain associated protein##NM_001350|DAXX|1616|death-domain associated protein##AK315747|ZBTB22|9278|zinc finger and BTB domain containing 22##NM_001145338|ZBTB22|9278|zinc finger and BTB domain containing 22##BC018541|ZBTB22|9278|zinc finger and BTB domain containing 22##NM_005453|ZBTB22|9278|zinc finger and BTB domain containing 22##NM_002263|KIFC1|3833|kinesin family member C1##AJ010479|KIFC1|3833|kinesin family member C1##BC000712|KIFC1|3833|kinesin family member C1##BC073878|KIFC1|3833|kinesin family member C1	0.734401	CTCF.p2:0:0.734
chr9	89252507	89252634	reg1017528.p1	7.208	+	TSC_hg19_v1_chr9_-_88969326 AL832193 CR936608 AK055546 CR933644 AL832026 BX641077 CR933643 BC111003 NM_001185059 NM_001185074 NM_024617	-283197	-	AK308352 TSC_hg19_v1_chr9_-_88969321 BC032456	-283281	-	AB528754 AM393721 TSC_hg19_v1_chr9_-_88897454 BC053900 BC071621 AY015642 AL834356 AF284752 BC002675 AK055643 AK225937 AK309289 NM_030940	-355126	-	L13698 NM_002048	309533	-	AK127445 NM_001001709 BC132741 BC136791 HQ258059	511031	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	860016	+	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC053900|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC071621|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AY015642|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AL834356|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AF284752|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC002675|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK055643|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK225937|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##NM_030940|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##L13698|GAS1|2619|growth arrest-specific 1##NM_002048|GAS1|2619|growth arrest-specific 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1	0.996097	CTCF.p2:-10:0.996
chr14	77277434	77277549	reg1020404.p2	7.207	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	-48439	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	-49036	+	TSC_hg19_v1_chr14_+_77227817 AK094330	-49691	+	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	1719	-	TSC_hg19_v1_chr14_-_77279257 NM_015305	1771	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	15304	+	BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B	0.913875	CTCF.p2:-6:0.914
chr22	32499801	32499892	reg1015684.p1	7.207	+	TSC_hg19_v1_chr22_+_32439250 M24847 BC139838 BC139839 CU013176 CU013464 AB463272	-60588	+	TSC_hg19_v1_chr22_+_32439229 CR456579	-60623	+	TSC_hg19_v1_chr22_+_32439103 AK312948	-60733	+	BC139845 CU012997 CU013285 AB527618 CR456485 NM_001010859 BC040263	55408	-	BC069827 BC069737 AJ010231 NM_006605	89579	-	CR456563 NM_001159546	98670	-	M24847|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139838|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139839|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CU013176|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CU013464|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CR456579|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##AK312948|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139845|C22orf42|150297|chromosome 22 open reading frame 42##CR456485|C22orf42|150297|chromosome 22 open reading frame 42##NM_001010859|C22orf42|150297|chromosome 22 open reading frame 42##BC040263|C22orf42|150297|chromosome 22 open reading frame 42##BC069827|RFPL2|10739|ret finger protein-like 2##BC069737|RFPL2|10739|ret finger protein-like 2##AJ010231|RFPL2|10739|ret finger protein-like 2##NM_006605|RFPL2|10739|ret finger protein-like 2##CR456563|RFPL2|10739|ret finger protein-like 2##NM_001159546|RFPL2|10739|ret finger protein-like 2	0.0	
chr10	5991480	5991603	reg1021140.p1	7.206	+	AF380349 NM_032807	-55193	+	TSC_hg19_v1_chr10_+_5932218 AF456237 BC113375 BC113377 AF454502 BC110884	-59297	+	TSC_hg19_v1_chr10_+_5932214 NM_178150	-59330	+	CR542023 HQ401283 AB590464 BC121140 AK304211 BC074726 BC121141 U31628 NM_002189 NM_172200	27972	-	AF035279 BC107777 BC065506 NM_001243539	28473	-	AB528862 AK223313 K03122 X01057 AK313847 NM_000417	112681	-	AF380349|FBXO18|84893|F-box protein, helicase, 18##NM_032807|FBXO18|84893|F-box protein, helicase, 18##AF456237|FBXO18|84893|F-box protein, helicase, 18##BC113375|FBXO18|84893|F-box protein, helicase, 18##BC113377|FBXO18|84893|F-box protein, helicase, 18##AF454502|FBXO18|84893|F-box protein, helicase, 18##BC110884|FBXO18|84893|F-box protein, helicase, 18##NM_178150|FBXO18|84893|F-box protein, helicase, 18##CR542023|IL15RA|3601|interleukin 15 receptor, alpha##HQ401283|IL15RA|3601|interleukin 15 receptor, alpha##BC121140|IL15RA|3601|interleukin 15 receptor, alpha##AK304211|IL15RA|3601|interleukin 15 receptor, alpha##BC074726|IL15RA|3601|interleukin 15 receptor, alpha##BC121141|IL15RA|3601|interleukin 15 receptor, alpha##U31628|IL15RA|3601|interleukin 15 receptor, alpha##NM_002189|IL15RA|3601|interleukin 15 receptor, alpha##NM_172200|IL15RA|3601|interleukin 15 receptor, alpha##AF035279|IL15RA|3601|interleukin 15 receptor, alpha##BC107777|IL15RA|3601|interleukin 15 receptor, alpha##BC065506|IL15RA|3601|interleukin 15 receptor, alpha##NM_001243539|IL15RA|3601|interleukin 15 receptor, alpha##AK223313|IL2RA|3559|interleukin 2 receptor, alpha##K03122|IL2RA|3559|interleukin 2 receptor, alpha##X01057|IL2RA|3559|interleukin 2 receptor, alpha##AK313847|IL2RA|3559|interleukin 2 receptor, alpha##NM_000417|IL2RA|3559|interleukin 2 receptor, alpha	0.933619	CTCF.p2:-15:0.934
chr1	236029491	236029583	reg1018550.p1	7.206	+	BC022485 NM_001098721 NM_004485	-215484	-	TSC_hg19_v1_chr1_-_235813301 AK311781 NM_001098722	-216355	-	BC029564 NM_152490 TSC_hg19_v1_chr1_-_235667782	-361756	-	TSC_hg19_v1_chr1_-_236030193 BC020793	646	-	NM_000081 U67615 TSC_hg19_v1_chr1_-_236030233	707	-	TSC_hg19_v1_chr1_-_236228375 AB209448 CU692272	198840	-	BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##AK311781|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098722|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##BC029564|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_152490|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_000081|LYST|1130|lysosomal trafficking regulator##U67615|LYST|1130|lysosomal trafficking regulator##AB209448|NID1|4811|nidogen 1	0.0	
chr2	118761036	118761143	reg1018959.p1	7.206	+	TSC_hg19_v1_chr2_+_118572298 BC003360 BC001238	-188772	+	AK001467 TSC_hg19_v1_chr2_+_118572283	-188806	+	NM_006773 TSC_hg19_v1_chr2_+_118572276 BC024739	-188821	+	AM393188 AM393503 AM393699 AB384355 AK057926 TSC_hg19_v1_chr2_-_118771647 BC093018 AK290722 AK309040 BC012052 AB209993	10525	-	TSC_hg19_v1_chr2_-_118771677 BC028609	10595	-	TSC_hg19_v1_chr2_-_118771720 NM_019044	10644	-	BC003360|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC001238|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##AK001467|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##NM_006773|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC024739|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##AM393188|CCDC93|54520|coiled-coil domain containing 93##AM393503|CCDC93|54520|coiled-coil domain containing 93##AM393699|CCDC93|54520|coiled-coil domain containing 93##AK057926|CCDC93|54520|coiled-coil domain containing 93##BC093018|CCDC93|54520|coiled-coil domain containing 93##AK290722|CCDC93|54520|coiled-coil domain containing 93##AK309040|CCDC93|54520|coiled-coil domain containing 93##BC012052|CCDC93|54520|coiled-coil domain containing 93##AB209993|CCDC93|54520|coiled-coil domain containing 93##BC028609|CCDC93|54520|coiled-coil domain containing 93##NM_019044|CCDC93|54520|coiled-coil domain containing 93	0.983119	CTCF.p2:11:0.983
chr22	39266359	39266497	reg1018985.p2	7.206	+	NM_014293 TSC_hg19_v1_chr22_-_39240034	-26385	-	TSC_hg19_v1_chr22_-_39239733 AB527378	-26647	-	TSC_hg19_v1_chr22_-_39190149 AK223349 AK289744 AL035366 NM_005740	-76253	-	TSC_hg19_v1_chr22_-_39268213 CU680218 CU687960 DQ893667 DQ895787 BC064900	1763	-	TSC_hg19_v1_chr22_-_39268222 BC012111 AK293035	1793	-	TSC_hg19_v1_chr22_-_39268255 AK094829 NM_014292	1876	-	NM_014293|NPTXR|23467|neuronal pentraxin receptor##AK223349|DNAL4|10126|dynein, axonemal, light chain 4##AL035366|DNAL4|10126|dynein, axonemal, light chain 4##NM_005740|DNAL4|10126|dynein, axonemal, light chain 4##DQ893667|CBX6|23466|chromobox homolog 6##DQ895787|CBX6|23466|chromobox homolog 6##BC064900|CBX6|23466|chromobox homolog 6##BC012111|CBX6|23466|chromobox homolog 6##AK293035|CBX6|23466|chromobox homolog 6##AK094829|CBX6|23466|chromobox homolog 6##NM_014292|CBX6|23466|chromobox homolog 6	0.92973	CTCF.p2:-18:0.930
chr4	145064216	145064332	reg1021152.p1	7.206	+	AY950614 DQ893046 L07251 L07253 S77893 U00177 U00178 U00179 X57023 M12857 M36281 X51798 BC013328 EU338231 EU338232 EU338233 EU338234 L31860 X08054 BC005319 AK290561 NM_002099	-2429	-	AY509882 AY509883 AY950609 AY950610 AY950611 AY950612 U05255 J02982 BC121077 BC121078 EU338223 EU338224 EU338225 EU338226 EU338227 EU338228 EU338229 EU338230 EU338235 EU338236 EU338237 EU338238 BC069310 X08055 NM_002100	-123807	-	EU176664 BC064396 BC017864 M29610 NM_002102 NM_198682	-237587	-	NM_022475 AY009951 TSC_hg19_v1_chr4_+_145567307 AY009317 BC025311 BC015636 BC009298	502974	+	NM_001040876 NM_002940	954881	+	TSC_hg19_v1_chr4_-_146019349 AF132794 AL080090 BC005217 AB012109 NM_014885	955063	-	AY950614|GYPA|2993|glycophorin A (MNS blood group)##DQ893046|GYPA|2993|glycophorin A (MNS blood group)##L07251|GYPA|2993|glycophorin A (MNS blood group)##L07253|GYPA|2993|glycophorin A (MNS blood group)##U00177|GYPA|2993|glycophorin A (MNS blood group)##U00178|GYPA|2993|glycophorin A (MNS blood group)##U00179|GYPA|2993|glycophorin A (MNS blood group)##X57023|GYPA|2993|glycophorin A (MNS blood group)##M12857|GYPA|2993|glycophorin A (MNS blood group)##M36281|GYPA|2993|glycophorin A (MNS blood group)##X51798|GYPA|2993|glycophorin A (MNS blood group)##BC013328|GYPA|2993|glycophorin A (MNS blood group)##EU338231|GYPA|2993|glycophorin A (MNS blood group)##EU338232|GYPA|2993|glycophorin A (MNS blood group)##EU338233|GYPA|2993|glycophorin A (MNS blood group)##EU338234|GYPA|2993|glycophorin A (MNS blood group)##L31860|GYPA|2993|glycophorin A (MNS blood group)##X08054|GYPA|2993|glycophorin A (MNS blood group)##BC005319|GYPA|2993|glycophorin A (MNS blood group)##AK290561|GYPA|2993|glycophorin A (MNS blood group)##NM_002099|GYPA|2993|glycophorin A (MNS blood group)##AY509882|GYPB|2994|glycophorin B (MNS blood group)##AY509883|GYPB|2994|glycophorin B (MNS blood group)##AY950609|GYPB|2994|glycophorin B (MNS blood group)##AY950610|GYPB|2994|glycophorin B (MNS blood group)##AY950611|GYPB|2994|glycophorin B (MNS blood group)##U05255|GYPB|2994|glycophorin B (MNS blood group)##J02982|GYPB|2994|glycophorin B (MNS blood group)##BC121077|GYPB|2994|glycophorin B (MNS blood group)##BC121078|GYPB|2994|glycophorin B (MNS blood group)##EU338223|GYPB|2994|glycophorin B (MNS blood group)##EU338224|GYPB|2994|glycophorin B (MNS blood group)##EU338225|GYPB|2994|glycophorin B (MNS blood group)##EU338226|GYPB|2994|glycophorin B (MNS blood group)##EU338227|GYPB|2994|glycophorin B (MNS blood group)##EU338228|GYPB|2994|glycophorin B (MNS blood group)##EU338229|GYPB|2994|glycophorin B (MNS blood group)##EU338230|GYPB|2994|glycophorin B (MNS blood group)##EU338235|GYPB|2994|glycophorin B (MNS blood group)##EU338236|GYPB|2994|glycophorin B (MNS blood group)##EU338237|GYPB|2994|glycophorin B (MNS blood group)##EU338238|GYPB|2994|glycophorin B (MNS blood group)##BC069310|GYPB|2994|glycophorin B (MNS blood group)##X08055|GYPB|2994|glycophorin B (MNS blood group)##NM_002100|GYPB|2994|glycophorin B (MNS blood group)##EU176664|GYPE|2996|glycophorin E (MNS blood group)##BC064396|GYPE|2996|glycophorin E (MNS blood group)##BC017864|GYPE|2996|glycophorin E (MNS blood group)##M29610|GYPE|2996|glycophorin E (MNS blood group)##NM_002102|GYPE|2996|glycophorin E (MNS blood group)##NM_198682|GYPE|2996|glycophorin E (MNS blood group)##NM_022475|HHIP|64399|hedgehog interacting protein##AY009951|HHIP|64399|hedgehog interacting protein##AY009317|HHIP|64399|hedgehog interacting protein##BC025311|HHIP|64399|hedgehog interacting protein##BC015636|HHIP|64399|hedgehog interacting protein##BC009298|HHIP|64399|hedgehog interacting protein##NM_001040876|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##NM_002940|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##AF132794|ANAPC10|10393|anaphase promoting complex subunit 10##AL080090|ANAPC10|10393|anaphase promoting complex subunit 10##BC005217|ANAPC10|10393|anaphase promoting complex subunit 10##AB012109|ANAPC10|10393|anaphase promoting complex subunit 10##NM_014885|ANAPC10|10393|anaphase promoting complex subunit 10	0.999271	CTCF.p2:12:0.999
chr7	91265573	91265676	reg1018324.p1	7.206	+	TSC_hg19_v1_chr7_+_90893747 AB017363 NM_003505 AF072872 BC051271 AK314996	-371748	+	BC017719 TSC_hg19_v1_chr7_+_90893724	-371923	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	-926464	+	TSC_hg19_v1_chr7_-_91509979 BC108648 AL832861 AK298469 AK313641 NM_006980 Y09615 AK222730 AK311568	244391	-	TSC_hg19_v1_chr7_+_91570181 NM_005751 NM_147185 AJ131693 AF026245 BC015533 AB019691 AY803272 CU677341	304657	+	AB590319 CU689330 DQ891311 DQ894495 TSC_hg19_v1_chr7_-_91763765 D55653 BC018429	498098	-	AB017363|FZD1|8321|frizzled family receptor 1##NM_003505|FZD1|8321|frizzled family receptor 1##AF072872|FZD1|8321|frizzled family receptor 1##BC051271|FZD1|8321|frizzled family receptor 1##AK314996|FZD1|8321|frizzled family receptor 1##BC017719|FZD1|8321|frizzled family receptor 1##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14##BC108648|MTERF|7978|mitochondrial transcription termination factor##AL832861|MTERF|7978|mitochondrial transcription termination factor##AK298469|MTERF|7978|mitochondrial transcription termination factor##AK313641|MTERF|7978|mitochondrial transcription termination factor##NM_006980|MTERF|7978|mitochondrial transcription termination factor##Y09615|MTERF|7978|mitochondrial transcription termination factor##AK222730|MTERF|7978|mitochondrial transcription termination factor##NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##DQ891311|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##DQ894495|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##D55653|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##BC018429|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1	0.0	
chr1	12844057	12844156	reg1016905.p1	7.205	+	NM_001080830	-9123	+	BC029894 NM_152290 AK026705 AK298760	-37940	+	AK127828 NM_001103169 NM_001103170	-67989	+	AK125568 AL049686 NM_023013 BC144199	7454	+	BC144426 AL049680 NM_001146344	47156	-	AB464565 BC171859 BC171865 BC171866 NM_001146181	64082	-	NM_001080830|PRAMEF12|390999|PRAME family member 12##BC029894|C1orf158|93190|chromosome 1 open reading frame 158##NM_152290|C1orf158|93190|chromosome 1 open reading frame 158##AK026705|C1orf158|93190|chromosome 1 open reading frame 158##AK298760|C1orf158|93190|chromosome 1 open reading frame 158##AK127828|AADACL3|126767|arylacetamide deacetylase-like 3##NM_001103169|AADACL3|126767|arylacetamide deacetylase-like 3##NM_001103170|AADACL3|126767|arylacetamide deacetylase-like 3##AK125568|PRAMEF1|65121|PRAME family member 1##AL049686|PRAMEF1|65121|PRAME family member 1##NM_023013|PRAMEF1|65121|PRAME family member 1##BC144199|PRAMEF1|65121|PRAME family member 1##BC144426|PRAMEF11|440560|PRAME family member 11##AL049680|PRAMEF11|440560|PRAME family member 11##NM_001146344|PRAMEF11|440560|PRAME family member 11##BC171859|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like##BC171865|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like##BC171866|HNRNPCL1|343069|heterogeneous nuclear ribonucleoprotein C-like 1##NM_001146181|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	0.956843	CTCF.p2:-7:0.957
chr1	174227365	174227463	reg1016704.p1	7.205	+	AK095838 TSC_hg19_v1_chr1_+_174128676 AL157958	-98722	+	BC041888 NM_014857 TSC_hg19_v1_chr1_+_174128608	-98814	+	TSC_hg19_v1_chr1_-_173991524 AB007961	-235899	-	BC095532 NM_005684 CU688296 CU688298 BC067456 BC067457 BC067458 BC067459 BC067460 BC069460 HQ995526	189816	+	AB007940 NM_001243765	541620	+	NM_001243763 AL049701	616145	+	AK095838|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL157958|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC041888|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_014857|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC095532|GPR52|9293|G protein-coupled receptor 52##NM_005684|GPR52|9293|G protein-coupled receptor 52##BC067456|GPR52|9293|G protein-coupled receptor 52##BC067457|GPR52|9293|G protein-coupled receptor 52##BC067458|GPR52|9293|G protein-coupled receptor 52##BC067459|GPR52|9293|G protein-coupled receptor 52##BC067460|GPR52|9293|G protein-coupled receptor 52##BC069460|GPR52|9293|G protein-coupled receptor 52##HQ995526|GPR52|9293|G protein-coupled receptor 52##AB007940|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243765|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243763|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL049701|RABGAP1L|9910|RAB GTPase activating protein 1-like	0.997773	CTCF.p2:-22:0.998
chr4	20430184	20430320	reg1022118.p1	7.205	+	AB017168 NM_004787 BC117190 BC143978 AF133270	-174916	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-2406786	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-2617641	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	271815	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	555377	-	AY118170 DQ148489 NM_147183 AK290998	875317	-	AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4##AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4	0.158682	
chr7	12428858	12428981	reg1021817.p1	7.205	+	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	-177994	+	TSC_hg19_v1_chr7_-_11871825 AK092252 AX747433 NM_015204	-557130	-	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	-1415409	+	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	14613	-	NM_001135924	14932	-	AB067492 NM_001112706 AK290363 AK075123 TSC_hg19_v1_chr7_+_12610346 BC021090 AB590413 DQ892033 DQ895224 AF276507	181388	+	NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A##AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains##NM_001135924|VWDE|221806|von Willebrand factor D and EGF domains##AB067492|SCIN|85477|scinderin##NM_001112706|SCIN|85477|scinderin##AK290363|SCIN|85477|scinderin##AK075123|SCIN|85477|scinderin##BC021090|SCIN|85477|scinderin##DQ892033|SCIN|85477|scinderin##DQ895224|SCIN|85477|scinderin##AF276507|SCIN|85477|scinderin	0.938886	CTCF.p2:0:0.939
chr9	100685895	100686052	reg1011260.p1	7.205	+	TSC_hg19_v1_chr9_-_100684783 CU678254 DQ892983 DQ896231 AY189280 AF151053 AK309270 BC002863 AK000213 AK302701 NM_016481	-1163	-	AB464529 TSC_hg19_v1_chr9_+_100616210	-69771	+	TSC_hg19_v1_chr9_+_100615409 NM_004473	-70502	+	AF306683 AF306682 AL833094 AY255672 NM_197978 AY244805	14548	-	AF228713 AF322875 BC048324 AK292441 NM_018437	21144	-	TSC_hg19_v1_chr9_+_100745521 NM_006401	59532	+	DQ892983|C9orf156|51531|chromosome 9 open reading frame 156##DQ896231|C9orf156|51531|chromosome 9 open reading frame 156##AY189280|C9orf156|51531|chromosome 9 open reading frame 156##AF151053|C9orf156|51531|chromosome 9 open reading frame 156##AK309270|C9orf156|51531|chromosome 9 open reading frame 156##BC002863|C9orf156|51531|chromosome 9 open reading frame 156##AK000213|C9orf156|51531|chromosome 9 open reading frame 156##AK302701|C9orf156|51531|chromosome 9 open reading frame 156##NM_016481|C9orf156|51531|chromosome 9 open reading frame 156##NM_004473|FOXE1|2304|forkhead box E1 (thyroid transcription factor 2)##AF306683|HEMGN|55363|hemogen##AF306682|HEMGN|55363|hemogen##AL833094|HEMGN|55363|hemogen##AY255672|HEMGN|55363|hemogen##NM_197978|HEMGN|55363|hemogen##AY244805|HEMGN|55363|hemogen##AF228713|HEMGN|55363|hemogen##AF322875|HEMGN|55363|hemogen##BC048324|HEMGN|55363|hemogen##AK292441|HEMGN|55363|hemogen##NM_018437|HEMGN|55363|hemogen##NM_006401|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	0.720315	CTCF.p2:-48:0.720
chr11	110333991	110334092	reg1018625.p1	7.204	+	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	-33325	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	-166728	-	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	-369911	+	AY496266 TSC_hg19_v1_chr11_-_110582834	248762	-	TSC_hg19_v1_chr11_-_110582887 AB037812	248884	-	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	249244	-	NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20##AB037812|ARHGAP20|57569|Rho GTPase activating protein 20##AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20	0.0	
chr11	31418972	31419086	reg1017326.p1	7.204	+	TSC_hg19_v1_chr11_+_31391404 NM_181706 AK123087 AL833128 AK289665 BC036571 BC044931 BC063804	-27627	+	AY247970 AK126066 NM_181807	-27691	-	BX647348 NM_020869	-404797	-	AK311611 BC023595 TSC_hg19_v1_chr11_-_31531154 AK310496 AK057788 NM_144981	112115	-	AK000505 NM_019040 TSC_hg19_v1_chr11_+_31531319 AK304885 AL136677 DQ891468 DQ894651 BC012514 AB463022 AM393460 AM393857	112284	+	AK094249 TSC_hg19_v1_chr11_-_31825606	406571	-	NM_181706|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK123087|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AL833128|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK289665|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC036571|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC044931|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC063804|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AY247970|DCDC1|341019|doublecortin domain containing 1##NM_181807|DCDC1|341019|doublecortin domain containing 1##BX647348|DCDC5|100506627|doublecortin domain containing 5##NM_020869|DCDC5|100506627|doublecortin domain containing 5##AK311611|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC023595|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK310496|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK057788|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_144981|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK000505|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##NM_019040|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AK304885|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AL136677|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##DQ891468|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##DQ894651|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##BC012514|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AM393460|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AM393857|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AK094249|PAX6|5080|paired box 6	0.093667	
chr17	41081361	41081495	reg1018438.p1	7.204	+	AK303771 NM_000151 U01120 TSC_hg19_v1_chr17_+_41052818 AK313982 BC020700 BC130478 BC136369 AB463690 HQ258400	-28575	+	AK025727 TSC_hg19_v1_chr17_+_41006139	-75308	+	CU690716 TSC_hg19_v1_chr17_+_41003393	-78052	+	TSC_hg19_v1_chr17_-_41116472 AK309477	35053	-	BC004172 BC019324 NM_025267 AK056965 AK094084 TSC_hg19_v1_chr17_-_41132133	50648	-	AK295447 NM_001136042 NM_001142653 NM_001142654	51116	-	AK303771|G6PC|2538|glucose-6-phosphatase, catalytic subunit##NM_000151|G6PC|2538|glucose-6-phosphatase, catalytic subunit##U01120|G6PC|2538|glucose-6-phosphatase, catalytic subunit##AK313982|G6PC|2538|glucose-6-phosphatase, catalytic subunit##BC130478|G6PC|2538|glucose-6-phosphatase, catalytic subunit##BC136369|G6PC|2538|glucose-6-phosphatase, catalytic subunit##HQ258400|G6PC|2538|glucose-6-phosphatase, catalytic subunit##AK025727|AOC3|8639|amine oxidase, copper containing 3 (vascular adhesion protein 1)##AK309477|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##BC004172|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##BC019324|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##NM_025267|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##AK056965|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##AK094084|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##AK295447|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##NM_001136042|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##NM_001142653|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##NM_001142654|AARSD1|80755|alanyl-tRNA synthetase domain containing 1	0.0	
chr1	204716119	204716243	reg1018553.p1	7.203	+	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	-61590	-	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	-230571	+	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	-230679	+	TSC_hg19_v1_chr1_+_204797779 BC040674 NM_001005388 NM_001005389 NM_001160332 NM_001160333 NM_015090 AK295291 AK299262 AK090639 AX746553	81631	+	TSC_hg19_v1_chr1_+_204839989 AK308686	123802	+	NM_001160331 BC137013 BC144454 BC144455 AB384522	197217	+	AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2##AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC040674|NFASC|23114|neurofascin##NM_001005388|NFASC|23114|neurofascin##NM_001005389|NFASC|23114|neurofascin##NM_001160332|NFASC|23114|neurofascin##NM_001160333|NFASC|23114|neurofascin##NM_015090|NFASC|23114|neurofascin##AK295291|NFASC|23114|neurofascin##AK299262|NFASC|23114|neurofascin##AK090639|NFASC|23114|neurofascin##AK308686|NFASC|23114|neurofascin##NM_001160331|NFASC|23114|neurofascin##BC137013|NFASC|23114|neurofascin##BC144454|NFASC|23114|neurofascin##BC144455|NFASC|23114|neurofascin	0.0	
chr5	10695274	10695382	reg1018659.p1	7.203	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-130886	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-253176	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-253325	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	65931	-	TSC_hg19_v1_chr5_-_10761341 BC002726	66014	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	66071	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.998289	CTCF.p2:16:0.998
chr15	29227646	29227800	reg1019407.p2	7.202	+	NM_001130414 NM_005503 AF047348 BC082986	-13874	+	TSC_hg19_v1_chr15_+_29077475 BC018626	-150241	+	TSC_hg19_v1_chr15_+_29033278 AK302529	-194400	+	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	334247	-	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	334306	-	NM_015307	635203	-	NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1	0.187991	
chr2	6056327	6056416	reg1018221.p1	7.202	+	U23752 AB028641 NM_003108 BC025789 AB464713	-223556	+	AK302299 NM_018436 BC029652	-2350574	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-2413802	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	949529	-	TSC_hg19_v1_chr2_-_7006650 AK308509	950332	-	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	961492	+	U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2	0.274678	CTCF.p2:0:0.275
chr5	180097665	180097785	reg1017758.p1	7.202	+	TSC_hg19_v1_chr5_-_180076616 NM_002020 NM_182925	-21101	-	AK291679 AK309910 TSC_hg19_v1_chr5_-_180076601	-21123	-	TSC_hg19_v1_chr5_-_180076572 U43143	-21152	-	NM_001001657 BC140756	69352	-	M55621 TSC_hg19_v1_chr5_-_180229805 AK075429 AK090523	132039	-	NM_002406	132322	-	NM_002020|FLT4|2324|fms-related tyrosine kinase 4##NM_182925|FLT4|2324|fms-related tyrosine kinase 4##AK291679|FLT4|2324|fms-related tyrosine kinase 4##AK309910|FLT4|2324|fms-related tyrosine kinase 4##U43143|FLT4|2324|fms-related tyrosine kinase 4##NM_001001657|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1##BC140756|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1##M55621|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK075429|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK090523|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_002406|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	0.089751	
chr8	112456575	112456680	reg1019186.p1	7.202	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-1469661	-	NM_001099743 NM_001099744	-1752608	-	AK290469 NM_001099745 NM_001099746	-1763394	-	AB114605 NM_198124	1932754	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	1992502	-	TSC_hg19_v1_chr8_-_116680208 AK304046	4223593	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.484937	CTCF.p2:3:0.485
chr10	61000468	61000626	reg1022088.p1	7.201	+	AL365474 NM_001143774 AM393181	-63259	+	BC011268 AK054956 TSC_hg19_v1_chr10_+_60936573 AB384640 AM392743	-63987	+	AL834339 NM_032439 TSC_hg19_v1_chr10_+_60936408 CR749429	-64159	+	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	121738	-	AK299924 NM_001143773	122113	-	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	469177	-	AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)	0.996913	CTCF.p2:-8:0.997
chr10	73063146	73063288	reg1019419.p1	7.201	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-90837	+	NM_000281	-414677	-	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	-414915	-	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	15808	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	15829	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	93521	+	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_000281|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23	0.999667	CTCF.p2:2:1.000
chrX	16911020	16911155	reg1018497.p1	7.201	+	TSC_hg19_v1_chrX_-_16888462 NM_002893	-22590	-	TSC_hg19_v1_chrX_-_16888456 X72841	-22636	-	AB463219 CR541701 AK291567 TSC_hg19_v1_chrX_-_16888381 BC114500 BC114501 U35143	-22782	-	TSC_hg19_v1_chrX_+_16964847 AF010233 NM_001080975 NM_004726 AF511533 AF512951	53845	+	TSC_hg19_v1_chrX_+_17393357 AK302437	482267	+	TSC_hg19_v1_chrX_+_17393541 AY436752 NM_198270	482455	+	NM_002893|RBBP7|5931|retinoblastoma binding protein 7##X72841|RBBP7|5931|retinoblastoma binding protein 7##CR541701|RBBP7|5931|retinoblastoma binding protein 7##AK291567|RBBP7|5931|retinoblastoma binding protein 7##BC114500|RBBP7|5931|retinoblastoma binding protein 7##BC114501|RBBP7|5931|retinoblastoma binding protein 7##U35143|RBBP7|5931|retinoblastoma binding protein 7##AF010233|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_001080975|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_004726|REPS2|9185|RALBP1 associated Eps domain containing 2##AF511533|REPS2|9185|RALBP1 associated Eps domain containing 2##AF512951|REPS2|9185|RALBP1 associated Eps domain containing 2##AK302437|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AY436752|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_198270|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	0.995116	CTCF.p2:26:0.995
chr10	108623419	108623563	reg1019723.p1	7.200	+	TSC_hg19_v1_chr10_-_108459000 AK123752	-164432	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-2222446	+	AB028982 NM_014978	-2222633	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	300885	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	3059718	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	3059786	-	AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.314918	CTCF.p2:-16:0.315
chr10	121362119	121362253	reg1020741.p1	7.200	+	TSC_hg19_v1_chr10_-_121356537 BC030025 NM_001033925 NM_003252	-5634	-	TSC_hg19_v1_chr10_-_121356475 AL833106 AK290695	-5686	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	-6078	-	TSC_hg19_v1_chr10_+_121410858 AF071218 AF095193 NM_004281	48634	+	AK222800 TSC_hg19_v1_chr10_+_121410891 BC006418 AF127139	48727	+	AK313026 TSC_hg19_v1_chr10_+_121410937	48750	+	BC030025|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##NM_001033925|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##NM_003252|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AL833106|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290695|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AF071218|BAG3|9531|BCL2-associated athanogene 3##AF095193|BAG3|9531|BCL2-associated athanogene 3##NM_004281|BAG3|9531|BCL2-associated athanogene 3##AK222800|BAG3|9531|BCL2-associated athanogene 3##BC006418|BAG3|9531|BCL2-associated athanogene 3##AF127139|BAG3|9531|BCL2-associated athanogene 3##AK313026|BAG3|9531|BCL2-associated athanogene 3	0.941412	CTCF.p2:10:0.941
chr18	32241601	32241720	reg1016969.p2	7.200	+	NM_001128175 NM_001198938 NM_001198939 NM_001198940 AK308410 AL833285 BC005300 AB209102	-68356	+	AJ009668 TSC_hg19_v1_chr18_+_32073374	-168297	+	TSC_hg19_v1_chr18_+_32073264 NM_001198945 NM_001392 NM_032975 NM_032979 AK294746 U26742	-168396	+	NM_001198941 NM_032978 TSC_hg19_v1_chr18_+_32290229 AK291156	48586	+	NM_001390 NM_001391 AB463020 BT006937 EU831587 EU831619 EU831672 EU831705	94279	+	AK296450 NM_001198943	156265	+	NM_001128175|DTNA|1837|dystrobrevin, alpha##NM_001198938|DTNA|1837|dystrobrevin, alpha##NM_001198939|DTNA|1837|dystrobrevin, alpha##NM_001198940|DTNA|1837|dystrobrevin, alpha##AK308410|DTNA|1837|dystrobrevin, alpha##AL833285|DTNA|1837|dystrobrevin, alpha##BC005300|DTNA|1837|dystrobrevin, alpha##AB209102|DTNA|1837|dystrobrevin, alpha##AJ009668|DTNA|1837|dystrobrevin, alpha##NM_001198945|DTNA|1837|dystrobrevin, alpha##NM_001392|DTNA|1837|dystrobrevin, alpha##NM_032975|DTNA|1837|dystrobrevin, alpha##NM_032979|DTNA|1837|dystrobrevin, alpha##AK294746|DTNA|1837|dystrobrevin, alpha##U26742|DTNA|1837|dystrobrevin, alpha##NM_001198941|DTNA|1837|dystrobrevin, alpha##NM_032978|DTNA|1837|dystrobrevin, alpha##AK291156|DTNA|1837|dystrobrevin, alpha##NM_001390|DTNA|1837|dystrobrevin, alpha##NM_001391|DTNA|1837|dystrobrevin, alpha##BT006937|DTNA|1837|dystrobrevin, alpha##EU831587|DTNA|1837|dystrobrevin, alpha##EU831619|DTNA|1837|dystrobrevin, alpha##EU831672|DTNA|1837|dystrobrevin, alpha##EU831705|DTNA|1837|dystrobrevin, alpha##AK296450|DTNA|1837|dystrobrevin, alpha##NM_001198943|DTNA|1837|dystrobrevin, alpha	0.964816	CTCF.p2:-12:0.965
chr7	17342495	17342610	reg1019270.p1	7.199	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	-4283	+	AY359065 BC058284 NM_176813	-420948	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-497881	-	TSC_hg19_v1_chr7_+_17382906 BC021696	40354	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	637497	-	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	637575	-	AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13##AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13	0.0	
chr8	142070125	142070279	reg1021253.p1	7.199	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-58946	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-424578	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-548639	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	68535	+	AK128212 NM_001080431	168470	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	193988	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.057475	
chr8	75002822	75002944	reg1018040.p2	7.199	+	NM_001195797 NM_015364 BC020690 AF168121 AB590737 AB446498	-99263	+	NM_001040613 NM_017866 TSC_hg19_v1_chr8_+_74888429 BC002748	-114466	+	TSC_hg19_v1_chr8_-_74884503 BC093065 AL832244 NM_001204857 NM_001204858 NM_001204859 NM_001204860 NM_001204863 NM_001204864 NM_005648	-118372	-	BX537756 BC139832 BC098299 BC098314 BC099736 BC113856 BC114464 NM_020647 BC140875 BC140876	230645	-	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	259807	+	CR749657 NM_015886	733888	+	NM_001195797|LY96|23643|lymphocyte antigen 96##NM_015364|LY96|23643|lymphocyte antigen 96##BC020690|LY96|23643|lymphocyte antigen 96##AF168121|LY96|23643|lymphocyte antigen 96##AB446498|LY96|23643|lymphocyte antigen 96##NM_001040613|TMEM70|54968|transmembrane protein 70##NM_017866|TMEM70|54968|transmembrane protein 70##BC002748|TMEM70|54968|transmembrane protein 70##BC093065|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##AL832244|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204857|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204858|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204859|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204860|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204863|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204864|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_005648|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##BX537756|JPH1|56704|junctophilin 1##BC139832|JPH1|56704|junctophilin 1##BC098299|JPH1|56704|junctophilin 1##BC098314|JPH1|56704|junctophilin 1##BC099736|JPH1|56704|junctophilin 1##BC113856|JPH1|56704|junctophilin 1##BC114464|JPH1|56704|junctophilin 1##NM_020647|JPH1|56704|junctophilin 1##BC140875|JPH1|56704|junctophilin 1##BC140876|JPH1|56704|junctophilin 1##AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15	0.173459	
chr19	4267132	4267279	reg1020020.p1	7.198	+	TSC_hg19_v1_chr19_+_4247086 AK001236 BC000561 AK023988 NM_018074 AF091080	-20115	+	BC015364 L08187 NM_005755 BC046112 AB528398 DQ891589 EU176581 CU677281	-37685	+	NM_133475	-83855	+	AK056268 NM_020209	11392	+	HQ452865 HQ452866 AY358964 BC015655 NM_001169126 NM_144615	35199	-	NM_024333 TSC_hg19_v1_chr19_+_4304594 AK315661 AK295523 AK303606 AY032617 BC003124 AK021750 AF316829 DQ891833 DQ895020	37460	+	AK001236|CCDC94|55702|coiled-coil domain containing 94##BC000561|CCDC94|55702|coiled-coil domain containing 94##AK023988|CCDC94|55702|coiled-coil domain containing 94##NM_018074|CCDC94|55702|coiled-coil domain containing 94##AF091080|CCDC94|55702|coiled-coil domain containing 94##BC015364|EBI3|10148|Epstein-Barr virus induced 3##L08187|EBI3|10148|Epstein-Barr virus induced 3##NM_005755|EBI3|10148|Epstein-Barr virus induced 3##BC046112|EBI3|10148|Epstein-Barr virus induced 3##DQ891589|EBI3|10148|Epstein-Barr virus induced 3##EU176581|EBI3|10148|Epstein-Barr virus induced 3##NM_133475|ANKRD24|170961|ankyrin repeat domain 24##AK056268|SHD|56961|Src homology 2 domain containing transforming protein D##NM_020209|SHD|56961|Src homology 2 domain containing transforming protein D##HQ452865|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##HQ452866|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##AY358964|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##BC015655|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##NM_001169126|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##NM_144615|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##NM_024333|FSD1|79187|fibronectin type III and SPRY domain containing 1##AK315661|FSD1|79187|fibronectin type III and SPRY domain containing 1##AK295523|FSD1|79187|fibronectin type III and SPRY domain containing 1##AK303606|FSD1|79187|fibronectin type III and SPRY domain containing 1##AY032617|FSD1|79187|fibronectin type III and SPRY domain containing 1##BC003124|FSD1|79187|fibronectin type III and SPRY domain containing 1##AK021750|FSD1|79187|fibronectin type III and SPRY domain containing 1##AF316829|FSD1|79187|fibronectin type III and SPRY domain containing 1##DQ891833|FSD1|79187|fibronectin type III and SPRY domain containing 1##DQ895020|FSD1|79187|fibronectin type III and SPRY domain containing 1	0.999623	CTCF.p2:-3:1.000
chrX	130886548	130886729	reg1019241.p1	7.198	+	BC137050 AB529233 NM_001004486	-208640	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-463226	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-463376	-	TSC_hg19_v1_chrX_-_130964633 AK097911	78013	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	270683	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	271002	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.047392	
chr1	51339159	51339267	reg1007147.p1	7.197	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	-450102	-	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-763675	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-764529	+	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	86364	-	TSC_hg19_v1_chr1_-_51425740 BC067100	86543	-	TSC_hg19_v1_chr1_-_51425796 AJ271408	86586	-	NM_032110|DMRTA2|63950|DMRT-like family A2##AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1##AJ271408|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.979531	CTCF.p2:6:0.980
chr8	41561391	41561571	reg1018596.p1	7.197	+	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	-38718	-	AB587362 AK057898 NM_152568	-56606	-	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	-125787	+	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	93659	-	AK026601 TSC_hg19_v1_chr8_+_41685847	124344	+	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	192829	-	AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic	0.0	
chr16	69139425	69139549	reg1019357.p2	7.196	+	AK291400 NM_001199280	-21	+	TSC_hg19_v1_chr16_+_68877504 BC092500 AB051533 NM_024562 AB463318	-261982	+	TSC_hg19_v1_chr16_+_68771304 Z18923	-368176	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	653	+	AF234839 NM_005329	1955	+	TSC_hg19_v1_chr16_-_69166063 NM_001040146	26609	-	AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##BC092500|TMCO7|79613|transmembrane and coiled-coil domains 7##AB051533|TMCO7|79613|transmembrane and coiled-coil domains 7##NM_024562|TMCO7|79613|transmembrane and coiled-coil domains 7##Z18923|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3##AF234839|HAS3|3038|hyaluronan synthase 3##NM_005329|HAS3|3038|hyaluronan synthase 3##NM_001040146|CHTF8|54921|CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)	0.0	
chr5	5063884	5064018	reg1020173.p2	7.196	+	AY335938 NM_024337	-1467784	+	AY249325 NM_178569 BC101608 BC101634 BC143638 BC143639 BC143640 BC171731	-2311650	+	AB188492 NM_001134222 NM_033267 BC065189	-2312180	-	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	76560	+	TSC_hg19_v1_chr5_+_5422777 AK126937	358824	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	358958	+	AY335938|IRX1|79192|iroquois homeobox 1##NM_024337|IRX1|79192|iroquois homeobox 1##AY249325|C5orf38|153571|chromosome 5 open reading frame 38##NM_178569|C5orf38|153571|chromosome 5 open reading frame 38##BC101608|C5orf38|153571|chromosome 5 open reading frame 38##BC101634|C5orf38|153571|chromosome 5 open reading frame 38##BC143638|C5orf38|153571|chromosome 5 open reading frame 38##BC143639|C5orf38|153571|chromosome 5 open reading frame 38##BC143640|C5orf38|153571|chromosome 5 open reading frame 38##BC171731|C5orf38|153571|chromosome 5 open reading frame 38##AB188492|IRX2|153572|iroquois homeobox 2##NM_001134222|IRX2|153572|iroquois homeobox 2##NM_033267|IRX2|153572|iroquois homeobox 2##BC065189|IRX2|153572|iroquois homeobox 2##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947	0.735909	CTCF.p2:37:0.736
chr6	109214705	109214826	reg1017895.p2	7.196	+	TSC_hg19_v1_chr6_+_109169624 AK294574 NM_032131 AK292499 BC030603	-45144	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	-332508	+	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	-332690	+	AF033121 NM_001199934	115425	-	TSC_hg19_v1_chr6_-_109330747 AF033120	115951	-	TSC_hg19_v1_chr6_-_109330756 AK290551 NM_001199933	115999	-	AK294574|ARMC2|84071|armadillo repeat containing 2##NM_032131|ARMC2|84071|armadillo repeat containing 2##AK292499|ARMC2|84071|armadillo repeat containing 2##BC030603|ARMC2|84071|armadillo repeat containing 2##AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3##BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##AF033121|SESN1|27244|sestrin 1##NM_001199934|SESN1|27244|sestrin 1##AF033120|SESN1|27244|sestrin 1##AK290551|SESN1|27244|sestrin 1##NM_001199933|SESN1|27244|sestrin 1	0.847935	CTCF.p2:11:0.848
chr2	25584924	25585073	reg1020729.p1	7.195	+	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	-19536	-	TSC_hg19_v1_chr2_-_25565353 AB208833	-19635	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	-19670	-	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	311403	-	AB385496 TSC_hg19_v1_chr2_-_26101159	516131	-	TSC_hg19_v1_chr2_-_26101174 AB084279	516175	-	BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)	0.987051	CTCF.p2:-18:0.987
chr5	102006038	102006183	reg1022615.p1	7.195	+	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	-171477	-	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	-374002	-	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-1767182	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	195420	+	M37721 TSC_hg19_v1_chr5_+_102201730 AK296521 AK290158 S75037 S75038 AB527419 AB095007 BT007419	195696	+	BC151135 BC157835 BC015325 CR627424 AK295796 AK225572 AK000132 NM_017676 TSC_hg19_v1_chr5_-_102455843	449703	-	DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase##M37721|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK296521|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK290158|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75037|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75038|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AB095007|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BT007419|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BC151135|GIN1|54826|gypsy retrotransposon integrase 1##BC157835|GIN1|54826|gypsy retrotransposon integrase 1##BC015325|GIN1|54826|gypsy retrotransposon integrase 1##CR627424|GIN1|54826|gypsy retrotransposon integrase 1##AK295796|GIN1|54826|gypsy retrotransposon integrase 1##AK225572|GIN1|54826|gypsy retrotransposon integrase 1##AK000132|GIN1|54826|gypsy retrotransposon integrase 1##NM_017676|GIN1|54826|gypsy retrotransposon integrase 1	0.999351	CTCF.p2:11:0.999
chr6	109394666	109394811	reg1019611.p1	7.195	+	AF086525 TSC_hg19_v1_chr6_+_109330932	-63817	+	TSC_hg19_v1_chr6_-_109330756 AK290551 NM_001199933	-63974	-	TSC_hg19_v1_chr6_-_109330747 AF033120	-64022	-	AK290157 TSC_hg19_v1_chr6_-_109415662 NM_014454	20872	-	NM_001083535 BC064365	21619	+	TSC_hg19_v1_chr6_+_109416697 AK092723 AX747690 AK289910	21979	+	AK290551|SESN1|27244|sestrin 1##NM_001199933|SESN1|27244|sestrin 1##AF033120|SESN1|27244|sestrin 1##AK290157|SESN1|27244|sestrin 1##NM_014454|SESN1|27244|sestrin 1##NM_001083535|CEP57L1|285753|centrosomal protein 57kDa-like 1##BC064365|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK092723|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK289910|CEP57L1|285753|centrosomal protein 57kDa-like 1	0.477437	CTCF.p2:27:0.477
chr9	78918013	78918145	reg1018866.p2	7.195	+	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	-412444	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	-1214569	+	TSC_hg19_v1_chr9_+_77703406 NM_012383	-1214679	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	91312	-	AY196293 NM_001097634	138502	+	NM_001097633 NM_001490 TSC_hg19_v1_chr9_+_79074142 AY196294 AY196295 AL832647	156037	+	NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1##NM_012383|OSTF1|26578|osteoclast stimulating factor 1##BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097633|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001490|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196294|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196295|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AL832647|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.971095	CTCF.p2:-1:0.971
chr10	31611765	31611864	reg1017668.p1	7.194	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-1725	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-3681	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-3857	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	605910	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	605971	-	TSC_hg19_v1_chr10_-_32344938 AB462413	733118	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.145767	
chr13	103500022	103500123	reg1017643.p2	7.194	+	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-1586	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-1818	+	TSC_hg19_v1_chr13_+_103498240 NM_000123 BC031522 AF462447	-1863	+	NM_000452 U10417	219123	-	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	2618232	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	2618519	+	BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000123|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##BC031522|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AF462447|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator	0.0	
chr3	193846139	193846273	reg1022096.p1	7.194	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-535041	+	TSC_hg19_v1_chr3_+_193311006 BC043443 BC075805 AB011139	-535139	+	TSC_hg19_v1_chr3_+_193310928 NM_015560 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837	-535251	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	7727	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	7749	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	225868	-	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)##BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)##AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2	0.854028	CTCF.p2:9:0.854
chr5	151122487	151122626	reg1019936.p1	7.194	+	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	-56048	-	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	-56095	-	AF231022 NM_001447	-174052	-	TSC_hg19_v1_chr5_-_151138170 AK091843 AX747215 NM_004045 AK293063 BC112248 BC112250	15659	-	TSC_hg19_v1_chr5_-_151150991 AB593120	28417	-	TSC_hg19_v1_chr5_+_151151479 BX648012 NM_005754 NM_198395	28916	+	AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##AK091843|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##NM_004045|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AK293063|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112248|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112250|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AB593120|LOC100652758|100652758|uncharacterized LOC100652758##BX648012|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_005754|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_198395|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1	0.781975	CTCF.p2:4:0.782
chr7	112580258	112580392	reg1019041.p1	7.194	+	AL834437 AK299901 TSC_hg19_v1_chr7_-_112579931 BC114615 AK056380 NM_152556	-495	-	AK293311 TSC_hg19_v1_chr7_-_112430447 AK314460 AL136626 AK025482 NM_022484	-149882	-	NM_001134468 BC031976 AK096894 NM_182597	-459339	+	AK297464 AK312587 NM_001146266 AL161959 NM_001146267 TSC_hg19_v1_chr7_-_112726667	146170	-	BC030577 TSC_hg19_v1_chr7_-_112727780	147455	-	TSC_hg19_v1_chr7_-_112727812 AK309392 AF250237 AK302769	147482	-	AL834437|C7orf60|154743|chromosome 7 open reading frame 60##AK299901|C7orf60|154743|chromosome 7 open reading frame 60##BC114615|C7orf60|154743|chromosome 7 open reading frame 60##AK056380|C7orf60|154743|chromosome 7 open reading frame 60##NM_152556|C7orf60|154743|chromosome 7 open reading frame 60##AK293311|TMEM168|64418|transmembrane protein 168##AK314460|TMEM168|64418|transmembrane protein 168##AL136626|TMEM168|64418|transmembrane protein 168##AK025482|TMEM168|64418|transmembrane protein 168##NM_022484|TMEM168|64418|transmembrane protein 168##NM_001134468|C7orf53|286006|chromosome 7 open reading frame 53##BC031976|C7orf53|286006|chromosome 7 open reading frame 53##AK096894|C7orf53|286006|chromosome 7 open reading frame 53##NM_182597|C7orf53|286006|chromosome 7 open reading frame 53##AK297464|GPR85|54329|G protein-coupled receptor 85##AK312587|GPR85|54329|G protein-coupled receptor 85##NM_001146266|GPR85|54329|G protein-coupled receptor 85##AL161959|GPR85|54329|G protein-coupled receptor 85##NM_001146267|GPR85|54329|G protein-coupled receptor 85##BC030577|GPR85|54329|G protein-coupled receptor 85##AK309392|GPR85|54329|G protein-coupled receptor 85##AF250237|GPR85|54329|G protein-coupled receptor 85##AK302769|GPR85|54329|G protein-coupled receptor 85	0.0	
chr9	613773	613900	reg1005217.p1	7.193	+	TSC_hg19_v1_chr9_+_504732 BX648931 AL832454 NM_015158 AK292989 AL833161 AK290028 AB205106	-109088	+	TSC_hg19_v1_chr9_+_273045 HM991479 NM_001190458 NM_001193536 AK093572 AX748209 HM991480 BC045629 AK310555 BC130518 BC143929	-340783	+	NM_152569	-397944	-	AK311119 AB205111 TSC_hg19_v1_chr9_+_684289	70408	+	AB205112 TSC_hg19_v1_chr9_+_686677	72830	+	TSC_hg19_v1_chr9_+_706828 BC038116 NM_153186	92994	+	BX648931|KANK1|23189|KN motif and ankyrin repeat domains 1##AL832454|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_015158|KANK1|23189|KN motif and ankyrin repeat domains 1##AK292989|KANK1|23189|KN motif and ankyrin repeat domains 1##AL833161|KANK1|23189|KN motif and ankyrin repeat domains 1##AK290028|KANK1|23189|KN motif and ankyrin repeat domains 1##AB205106|KANK1|23189|KN motif and ankyrin repeat domains 1##HM991479|DOCK8|81704|dedicator of cytokinesis 8##NM_001190458|DOCK8|81704|dedicator of cytokinesis 8##NM_001193536|DOCK8|81704|dedicator of cytokinesis 8##AK093572|DOCK8|81704|dedicator of cytokinesis 8##HM991480|DOCK8|81704|dedicator of cytokinesis 8##BC045629|DOCK8|81704|dedicator of cytokinesis 8##AK310555|DOCK8|81704|dedicator of cytokinesis 8##BC130518|DOCK8|81704|dedicator of cytokinesis 8##BC143929|DOCK8|81704|dedicator of cytokinesis 8##NM_152569|C9orf66|157983|chromosome 9 open reading frame 66##BC038116|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_153186|KANK1|23189|KN motif and ankyrin repeat domains 1	0.999136	CTCF.p2:-18:0.964
chr11	83004123	83004236	reg1019832.p1	7.192	+	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	-6774	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	-7146	-	BX648690 NM_182603 DQ508815 AK095193 BC171752	-98691	+	AK299778 CR933674 NM_001142702	389272	-	AK294375 AK126776 AK295624 NM_001142700	980097	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	1024202	-	AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##BX648690|ANKRD42|338699|ankyrin repeat domain 42##NM_182603|ANKRD42|338699|ankyrin repeat domain 42##DQ508815|ANKRD42|338699|ankyrin repeat domain 42##AK095193|ANKRD42|338699|ankyrin repeat domain 42##BC171752|ANKRD42|338699|ankyrin repeat domain 42##AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)	0.797266	CTCF.p2:7:0.797
chr15	91445533	91445647	reg1017567.p1	7.192	+	DQ891350 DQ894530 AB590559 AY513654 AY513655 AY513656 AY513657 NM_001143783 NM_001143784	-17317	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	-17889	+	NM_002569 X17094	-33706	+	TSC_hg19_v1_chr15_+_91445984 D55649 L28821	386	+	AK289863 TSC_hg19_v1_chr15_+_91446685	1035	+	BC136448 BC144111 NM_006122	1829	+	DQ891350|FES|2242|feline sarcoma oncogene##DQ894530|FES|2242|feline sarcoma oncogene##AY513654|FES|2242|feline sarcoma oncogene##AY513655|FES|2242|feline sarcoma oncogene##AY513656|FES|2242|feline sarcoma oncogene##AY513657|FES|2242|feline sarcoma oncogene##NM_001143783|FES|2242|feline sarcoma oncogene##NM_001143784|FES|2242|feline sarcoma oncogene##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##D55649|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##L28821|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##AK289863|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	0.027714	
chr20	7917270	7917370	reg1021435.p1	7.192	+	BC069214 NM_001200	-1168576	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-1813157	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-1813443	-	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	3782	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	82980	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	83087	-	BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4	0.897466	CTCF.p2:-8:0.897
chr5	111546247	111546359	reg1018969.p1	7.192	+	TSC_hg19_v1_chr5_+_111496560 AB002437	-49734	+	AK298779 NM_001142474 NM_001142475	-233729	-	NM_001142477 TSC_hg19_v1_chr5_-_111093886 NM_001142476	-452450	-	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	208570	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	496908	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	527270	+	AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13##AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli	0.947378	CTCF.p2:-2:0.947
chr17	78830342	78830480	reg1018842.p2	7.191	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-311593	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-311762	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-380084	-	TSC_hg19_v1_chr17_+_78935064 BC073898	104721	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	135230	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	135283	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.0	
chrX	106672518	106672642	reg1018273.p1	7.191	+	BC033510 NM_001169154 NM_173494	-222719	+	AK000137 TSC_hg19_v1_chrX_-_106449664 BC016327 BC017799 NM_017681	-222974	-	TSC_hg19_v1_chrX_-_106362053 AK023732 NM_001171080 NM_018301	-310520	-	NM_001204402 NM_002764 TSC_hg19_v1_chrX_+_106871719 D00860	199115	+	AK307748 AK312706 AK316467 TSC_hg19_v1_chrX_+_106871744 AK297968 BC001605 X15331 AK223169 DQ895833 EU176362 AB464022 CU674782	199218	+	BC018148 Z50781 NM_001015881	287073	-	BC033510|CXorf41|139212|chromosome X open reading frame 41##NM_001169154|CXorf41|139212|chromosome X open reading frame 41##NM_173494|CXorf41|139212|chromosome X open reading frame 41##AK000137|NUP62CL|54830|nucleoporin 62kDa C-terminal like##BC016327|NUP62CL|54830|nucleoporin 62kDa C-terminal like##BC017799|NUP62CL|54830|nucleoporin 62kDa C-terminal like##NM_017681|NUP62CL|54830|nucleoporin 62kDa C-terminal like##AK023732|RBM41|55285|RNA binding motif protein 41##NM_001171080|RBM41|55285|RNA binding motif protein 41##NM_018301|RBM41|55285|RNA binding motif protein 41##NM_001204402|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##NM_002764|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##D00860|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK307748|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK312706|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK316467|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK297968|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC001605|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##X15331|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK223169|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##DQ895833|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##EU176362|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC018148|TSC22D3|1831|TSC22 domain family, member 3##Z50781|TSC22D3|1831|TSC22 domain family, member 3##NM_001015881|TSC22D3|1831|TSC22 domain family, member 3	1.724005	CTCF.p2:-4:0.999	CTCF.p2:78:0.725
chr1	235183855	235184000	reg1015317.p1	7.190	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-288153	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-438681	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-440069	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	108162	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	108304	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	140636	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr13	33400524	33400695	reg1019196.p1	7.190	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-239926	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-239970	+	TSC_hg19_v1_chr13_+_33160610 AL137201	-239991	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	189914	+	AY082590 BC046563 NM_001243466 NM_178007	359606	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	379555	-	BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr1	53132135	53132262	reg1022209.p1	7.190	+	AK128236 BC041608 NM_001042693	-33158	+	NM_015696 TSC_hg19_v1_chr1_+_53068073 AF320068 AK027683 AY358402 BC032788 DQ890863 DQ894018 CU689540	-64134	+	TSC_hg19_v1_chr1_-_53018765 BC012047 BC018753 BC035820 AK303532 NM_001009881 NM_015269 AK307579 AK095733	-113445	-	TSC_hg19_v1_chr1_-_53164009 BC015313 AK225041	31800	-	TSC_hg19_v1_chr1_-_53164020 AK225087	31819	-	TSC_hg19_v1_chr1_-_53164026 BC005992 AK022501 NM_023077	31832	-	AK128236|FAM159A|348378|family with sequence similarity 159, member A##BC041608|FAM159A|348378|family with sequence similarity 159, member A##NM_001042693|FAM159A|348378|family with sequence similarity 159, member A##NM_015696|GPX7|2882|glutathione peroxidase 7##AF320068|GPX7|2882|glutathione peroxidase 7##AK027683|GPX7|2882|glutathione peroxidase 7##AY358402|GPX7|2882|glutathione peroxidase 7##BC032788|GPX7|2882|glutathione peroxidase 7##DQ890863|GPX6|257202|glutathione peroxidase 6 (olfactory)##DQ894018|GPX7|2882|glutathione peroxidase 7##BC012047|ZCCHC11|23318|zinc finger, CCHC domain containing 11##BC018753|ZCCHC11|23318|zinc finger, CCHC domain containing 11##BC035820|ZCCHC11|23318|zinc finger, CCHC domain containing 11##NM_001009881|ZCCHC11|23318|zinc finger, CCHC domain containing 11##NM_015269|ZCCHC11|23318|zinc finger, CCHC domain containing 11##AK307579|ZCCHC11|23318|zinc finger, CCHC domain containing 11##AK095733|ZCCHC11|23318|zinc finger, CCHC domain containing 11##BC015313|SELRC1|65260|Sel1 repeat containing 1##AK225041|SELRC1|65260|Sel1 repeat containing 1##AK225087|SELRC1|65260|Sel1 repeat containing 1##BC005992|SELRC1|65260|Sel1 repeat containing 1##AK022501|SELRC1|65260|Sel1 repeat containing 1##NM_023077|SELRC1|65260|Sel1 repeat containing 1	0.663078	CTCF.p2:-4:0.663
chr15	62364037	62364183	reg1022201.p1	7.190	+	NM_207322 AF504646	-4922	+	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	-11496	-	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	-842613	-	NM_001007595	93371	-	TSC_hg19_v1_chr15_+_62682748 AB621808	318608	+	AF402000 NM_015059	575399	+	NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B##AB621808|TLN2|83660|talin 2##AF402000|TLN2|83660|talin 2##NM_015059|TLN2|83660|talin 2	0.997393	CTCF.p2:-17:0.997
chr4	181586064	181586212	reg1021524.p1	7.190	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-3222495	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-3222545	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-3222597	-	TSC_hg19_v1_chr4_+_183065111 AK308489	1478987	+	NM_001080477 HE578284 HE578285	1659016	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	2252392	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.997273	CTCF.p2:-12:0.997
chr7	142564190	142564298	reg1020282.p1	7.190	+	TSC_hg19_v1_chr7_+_142560518 BC110606 BC110607	-3729	+	TSC_hg19_v1_chr7_+_142552837 NM_004445 D83492 BC015495 BC051028 BC056159	-11519	+	M12426 TSC_hg19_v1_chr7_+_142495248	-69049	+	AF304463 AF365928 AJ243500 AJ243501 AF365927 AK291707 NM_018646 AJ487964	19139	-	BC034740 NM_019841 AF304464	66617	-	BC014596 NM_178829 AB083483 AB083484 AB464498	72415	+	BC110606|EPHB6|2051|EPH receptor B6##BC110607|EPHB6|2051|EPH receptor B6##NM_004445|EPHB6|2051|EPH receptor B6##D83492|EPHB6|2051|EPH receptor B6##BC015495|EPHB6|2051|EPH receptor B6##BC051028|EPHB6|2051|EPH receptor B6##BC056159|EPHB6|2051|EPH receptor B6##AF304463|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AF365928|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AJ243500|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AJ243501|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AF365927|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AK291707|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##NM_018646|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AJ487964|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##BC034740|TRPV5|56302|transient receptor potential cation channel, subfamily V, member 5##NM_019841|TRPV5|56302|transient receptor potential cation channel, subfamily V, member 5##AF304464|TRPV5|56302|transient receptor potential cation channel, subfamily V, member 5##BC014596|C7orf34|135927|chromosome 7 open reading frame 34##NM_178829|C7orf34|135927|chromosome 7 open reading frame 34##AB083483|C7orf34|135927|chromosome 7 open reading frame 34##AB083484|C7orf34|135927|chromosome 7 open reading frame 34	0.996057	CTCF.p2:0:0.996
chr19	51897259	51897439	reg1021508.p1	7.189	+	TSC_hg19_v1_chr19_-_51893838 BC085012 BC143997 BC043532 NM_001193623	-3524	-	BC074916 BC074917 BC126139 AF340019 BC069430 AF340020 NM_001161748 NM_030657	-6152	-	DQ895942 EU176419 BC015759 TSC_hg19_v1_chr19_-_51875909 NM_005601 S69115	-21470	-	TSC_hg19_v1_chr19_-_51920897 AK289900 AF310233 AY358337 AK290542 AK294185 AK303514 AK303717 BC101725 BC143497 BC143500 AF301007 AK292025 AK308982 AY032685 AF311905 NM_001171156 NM_001171157 NM_001171158 NM_001171159 NM_001171160 NM_001171161 NM_033130	23599	-	AF310234 AK290412 AF195092 AF223403 BC053319 AK290149 AK295589 NM_014442	64328	-	NM_001080405	82488	+	BC085012|LOC147646|147646|uncharacterized LOC147646##BC043532|LOC147646|147646|uncharacterized LOC147646##NM_001193623|LOC147646|147646|uncharacterized LOC147646##BC074916|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC074917|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC126139|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340019|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC069430|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340020|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_001161748|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_030657|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##DQ895942|NKG7|4818|natural killer cell group 7 sequence##EU176419|NKG7|4818|natural killer cell group 7 sequence##BC015759|NKG7|4818|natural killer cell group 7 sequence##NM_005601|NKG7|4818|natural killer cell group 7 sequence##S69115|NKG7|4818|natural killer cell group 7 sequence##AK289900|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF310233|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY358337|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK290542|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK294185|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303514|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303717|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC101725|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143497|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143500|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF301007|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK292025|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK308982|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY032685|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF311905|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171156|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171157|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171158|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171159|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171160|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171161|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_033130|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF310234|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290412|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF195092|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF223403|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##BC053319|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290149|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK295589|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_014442|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_001080405|CEACAM18|729767|carcinoembryonic antigen-related cell adhesion molecule 18	0.0	
chr2	186493968	186494068	reg1017750.p1	7.189	+	BC136602 TSC_hg19_v1_chr2_+_185463544	-1030526	+	BC142612 TSC_hg19_v1_chr2_+_185463319	-1030713	+	BC150198 TSC_hg19_v1_chr2_+_185463252 AK131402	-1030775	+	NM_173651	109336	+	TSC_hg19_v1_chr2_+_187350986 AF220184 NM_018471 AK298615 AK001901 AK297658 AF289586	856912	+	TSC_hg19_v1_chr2_+_187351010 BC012336 AF161421 AF109366	856992	+	BC136602|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A##BC150198|ZNF804A|91752|zinc finger protein 804A##AK131402|ZNF804A|91752|zinc finger protein 804A##NM_173651|FSIP2|401024|fibrous sheath interacting protein 2##AF220184|ZC3H15|55854|zinc finger CCCH-type containing 15##NM_018471|ZC3H15|55854|zinc finger CCCH-type containing 15##AK298615|ZC3H15|55854|zinc finger CCCH-type containing 15##AK001901|ZC3H15|55854|zinc finger CCCH-type containing 15##AK297658|ZC3H15|55854|zinc finger CCCH-type containing 15##AF289586|ZC3H15|55854|zinc finger CCCH-type containing 15##BC012336|ZC3H15|55854|zinc finger CCCH-type containing 15##AF161421|ZC3H15|55854|zinc finger CCCH-type containing 15##AF109366|ZC3H15|55854|zinc finger CCCH-type containing 15	0.14135	
chr7	96694432	96694537	reg1018086.p2	7.189	+	BC006226 TSC_hg19_v1_chr7_-_96654144 AK023493 NM_005221 AK297614	-40290	-	NM_005222	-59195	+	TSC_hg19_v1_chr7_-_96633611 AK091367 AX746939 BC101445 BC101446 BC101447 BC101985 BC113049	-60873	-	BC028409 NM_020186	51420	+	TSC_hg19_v1_chr7_+_96747012 BC022858 AF201933 BC020621	52546	+	NM_003182 NM_013996 NM_013997 NM_013998 U37529 AK222957 BC018047 X54469	666868	+	BC006226|DLX5|1749|distal-less homeobox 5##AK023493|DLX5|1749|distal-less homeobox 5##NM_005221|DLX5|1749|distal-less homeobox 5##AK297614|DLX5|1749|distal-less homeobox 5##NM_005222|DLX6|1750|distal-less homeobox 6##AK091367|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101445|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101446|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101447|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101985|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC113049|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC022858|ACN9|57001|ACN9 homolog (S. cerevisiae)##AF201933|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC020621|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_003182|TAC1|6863|tachykinin, precursor 1##NM_013996|TAC1|6863|tachykinin, precursor 1##NM_013997|TAC1|6863|tachykinin, precursor 1##NM_013998|TAC1|6863|tachykinin, precursor 1##U37529|TAC1|6863|tachykinin, precursor 1##AK222957|TAC1|6863|tachykinin, precursor 1##BC018047|TAC1|6863|tachykinin, precursor 1##X54469|TAC1|6863|tachykinin, precursor 1	0.987187	CTCF.p2:-1:0.987
chr1	14864953	14865074	reg1018898.p1	7.188	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-789072	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-789090	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-789128	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	60181	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	385706	+	AY505121 NM_001018001	391282	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.0	
chr20	48599086	48599267	reg1019618.p1	7.187	+	BX640603 TSC_hg19_v1_chr20_+_48552935 BC066919 AF265215 AK301731 BC013695 AB587558 BT006795	-46233	+	TSC_hg19_v1_chr20_+_48552933 AK315638	-46245	+	TSC_hg19_v1_chr20_+_48552913 AK091976 AK297188 NM_018683	-46262	+	TSC_hg19_v1_chr20_+_48599515 NM_005985 AK313228 BC012910 AF125377 DQ891599 DQ894793 AB464226 AF131208 CU680444	377	+	BT007382 CU674232 HQ448675 TSC_hg19_v1_chr20_-_48729684 BC000468 BX647511 BX648147 NM_001032288	130514	-	TSC_hg19_v1_chr20_-_48732483 AK314754 NM_022442 BC005215 NM_021988 NM_199144	133312	-	BX640603|RNF114|55905|ring finger protein 114##BC066919|RNF114|55905|ring finger protein 114##AF265215|RNF114|55905|ring finger protein 114##AK301731|RNF114|55905|ring finger protein 114##BC013695|RNF114|55905|ring finger protein 114##BT006795|RNF114|55905|ring finger protein 114##AK315638|RNF114|55905|ring finger protein 114##AK091976|RNF114|55905|ring finger protein 114##AK297188|RNF114|55905|ring finger protein 114##NM_018683|RNF114|55905|ring finger protein 114##NM_005985|SNAI1|6615|snail homolog 1 (Drosophila)##AK313228|SNAI1|6615|snail homolog 1 (Drosophila)##BC012910|SNAI1|6615|snail homolog 1 (Drosophila)##AF125377|SNAI1|6615|snail homolog 1 (Drosophila)##DQ891599|SNAI1|6615|snail homolog 1 (Drosophila)##DQ894793|SNAI1|6615|snail homolog 1 (Drosophila)##AF131208|SNAI1|6615|snail homolog 1 (Drosophila)##BT007382|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##HQ448675|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BC000468|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BX647511|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BX648147|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_001032288|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##AK314754|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_022442|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BC005215|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_021988|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_199144|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1	0.013892	
chr3	133930804	133930924	reg1020108.p1	7.187	+	BC051347 TSC_hg19_v1_chr3_-_133748836 NM_005630	-181991	-	U70867 BC041140 AK303550 AK309561 TSC_hg19_v1_chr3_-_133748770	-182114	-	AK025826 AK225383 BC051274 BC064502 BC082257 NM_025041	-282278	-	TSC_hg19_v1_chr3_-_133969397 AB527382	38600	-	TSC_hg19_v1_chr3_-_133969650 NM_001005861 NM_002958 X69970 X96588	38762	-	TSC_hg19_v1_chr3_-_134093290 AK223598 AK001343 AB023206 AK291616 NM_016201	162501	-	BC051347|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##NM_005630|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##U70867|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##BC041140|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK303550|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK309561|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK025826|C3orf36|80111|chromosome 3 open reading frame 36##AK225383|C3orf36|80111|chromosome 3 open reading frame 36##BC051274|C3orf36|80111|chromosome 3 open reading frame 36##BC064502|C3orf36|80111|chromosome 3 open reading frame 36##BC082257|C3orf36|80111|chromosome 3 open reading frame 36##NM_025041|C3orf36|80111|chromosome 3 open reading frame 36##NM_001005861|RYK|6259|RYK receptor-like tyrosine kinase##NM_002958|RYK|6259|RYK receptor-like tyrosine kinase##X69970|RYK|6259|RYK receptor-like tyrosine kinase##X96588|RYK|6259|RYK receptor-like tyrosine kinase##AK223598|AMOTL2|51421|angiomotin like 2##AK001343|AMOTL2|51421|angiomotin like 2##AB023206|AMOTL2|51421|angiomotin like 2##AK291616|AMOTL2|51421|angiomotin like 2##NM_016201|AMOTL2|51421|angiomotin like 2	0.033813	
chr5	13957287	13957420	reg1020948.p1	7.187	+	AX800026 AY045575 NM_001369	-12765	-	TSC_hg19_v1_chr5_-_11904184 AK296232	-2053169	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	-2053317	-	AY050643 TSC_hg19_v1_chr5_-_14011873	54517	-	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	186319	+	TSC_hg19_v1_chr5_+_14488527 AK131423	531186	+	AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)	0.697562	CTCF.p2:21:0.698
chr5	74532679	74532827	reg1021767.p1	7.187	+	AK097510 NM_001164443	-51	-	AF132035 NM_016591	-206030	-	AB020695 NM_015566 AK290004	-370115	-	NM_000859 NM_001130996 TSC_hg19_v1_chr5_+_74633004	100251	+	TSC_hg19_v1_chr5_+_74633022 BC024180	100276	+	TSC_hg19_v1_chr5_+_74633061 AK299655 BC033692 AK292892	100299	+	AK097510|ANKRD31|256006|ankyrin repeat domain 31##NM_001164443|ANKRD31|256006|ankyrin repeat domain 31##AF132035|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##NM_016591|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##AB020695|FAM169A|26049|family with sequence similarity 169, member A##NM_015566|FAM169A|26049|family with sequence similarity 169, member A##AK290004|FAM169A|26049|family with sequence similarity 169, member A##NM_000859|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##NM_001130996|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##BC024180|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##AK299655|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##BC033692|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##AK292892|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase	0.013267	
chr8	101170699	101170828	reg1018227.p1	7.187	+	TSC_hg19_v1_chr8_+_101170522 NM_003114 AF311312	-181	+	TSC_hg19_v1_chr8_+_101170231 AK057482 NM_172218 BC055091	-500	+	BC018157 NM_005034 TSC_hg19_v1_chr8_+_101162863 BC000806 Z47727	-7886	+	AB271913 AB271914 AB029316 NM_015435	144708	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	151418	-	TSC_hg19_v1_chr8_-_101322306 NM_183419	151522	-	NM_003114|SPAG1|6674|sperm associated antigen 1##AF311312|SPAG1|6674|sperm associated antigen 1##AK057482|SPAG1|6674|sperm associated antigen 1##NM_172218|SPAG1|6674|sperm associated antigen 1##BC055091|SPAG1|6674|sperm associated antigen 1##BC018157|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##NM_005034|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##BC000806|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##Z47727|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##NM_183419|RNF19A|25897|ring finger protein 19A	0.904562	CTCF.p2:-13:0.905
chr9	140916911	140917021	reg1020656.p1	7.187	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	-144732	+	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	-278437	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-403499	+	TSC_hg19_v1_chr9_+_140918045 AB209467	1108	+	TSC_hg19_v1_chr9_+_141044539 AK308459	127585	+	NM_001145249	189670	+	M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AK308459|TUBBP5|643224|tubulin, beta pseudogene 5##NM_001145249|FAM157B|100132403|family with sequence similarity 157, member B	0.505841	CTCF.p2:-24:0.461
chr16	66349257	66349368	reg1020089.p1	7.186	+	TSC_hg19_v1_chr16_-_65155987 AK297377	-1193318	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	-1193344	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	-1193410	-	NM_001795 TSC_hg19_v1_chr16_+_66400538	51221	+	TSC_hg19_v1_chr16_+_66400559 U84722	51248	+	AK300461 TSC_hg19_v1_chr16_+_66400593 X59796 AK300299 AB209908 AB035304 BC096363 BC096364 BC096365 BC117520	51290	+	AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	0.999102	CTCF.p2:4:0.999
chr5	131515968	131516105	reg1018922.p2	7.186	+	M11220 NM_000758 BC113924 BC113999 BC108724 M11734 M10663 AY720441 AB591004 AF510855	-106511	+	M20137 NM_000588 BC069472 BC066272 BC066273 BC066274 BC066275 BC066276 M17115 M14743 CU686832 HQ448457	-119664	+	AK314452 BC047453 NM_001205248 NM_001205251 BC026161 NM_001205250 DQ655980	-168343	-	NM_001017973 NM_004199 BC017062	46907	-	TSC_hg19_v1_chr5_-_131563545 AY358970 BC025960 BC035813 BX647924 NM_001017974 NM_001142598 NM_001142599	47482	-	TSC_hg19_v1_chr5_+_131593340 BC016765 NM_001131027 NM_003687 AF154335	77317	+	M11220|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_000758|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113924|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113999|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC108724|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M11734|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M10663|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AY720441|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AF510855|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M20137|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##NM_000588|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC069472|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066272|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066273|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066274|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066275|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066276|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M17115|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M14743|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##HQ448457|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##AK314452|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC047453|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205248|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205251|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC026161|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205250|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##DQ655980|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001017973|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_004199|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC017062|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##AY358970|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC025960|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC035813|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BX647924|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001017974|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142598|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142599|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC016765|PDLIM4|8572|PDZ and LIM domain 4##NM_001131027|PDLIM4|8572|PDZ and LIM domain 4##NM_003687|PDLIM4|8572|PDZ and LIM domain 4##AF154335|PDLIM4|8572|PDZ and LIM domain 4	0.063561	
chr6	53590753	53590857	reg1019660.p1	7.186	+	EF633513 NM_001003760	-60300	-	TSC_hg19_v1_chr6_-_53409900 AK304288 NM_001197115 NM_001498	-180894	-	TSC_hg19_v1_chr6_-_53409836 AK313480	-180970	-	TSC_hg19_v1_chr6_+_53659294 AK021896	68495	+	TSC_hg19_v1_chr6_+_53659776 BC003193 NM_018214	68954	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	69126	+	EF633513|KLHL31|401265|kelch-like 31 (Drosophila)##NM_001003760|KLHL31|401265|kelch-like 31 (Drosophila)##AK304288|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001197115|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001498|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK313480|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK021896|LRRC1|55227|leucine rich repeat containing 1##BC003193|LRRC1|55227|leucine rich repeat containing 1##NM_018214|LRRC1|55227|leucine rich repeat containing 1##AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1	0.987043	CTCF.p2:3:0.987
chr8	10708064	10708192	reg1018612.p1	7.186	+	TSC_hg19_v1_chr8_-_10697386 AF205718 AF418553 AJ344104	-10719	-	AY238941 AY523566 BC093762 BC143382 NM_017884 TSC_hg19_v1_chr8_-_10697379 AY029161 AK313715 BC015479 AK296724	-10794	-	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	-120144	-	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	350737	-	TSC_hg19_v1_chr8_+_11141999 BC034990 NM_015458	433884	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	434227	+	AF205718|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF418553|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ344104|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY238941|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY523566|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC093762|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC143382|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##NM_017884|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AK313715|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC015479|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7##AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##BC034990|MTMR9|66036|myotubularin related protein 9##NM_015458|MTMR9|66036|myotubularin related protein 9##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9	0.034626	
chr16	9232996	9233133	reg1018366.p1	7.185	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-47461	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-47524	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-175769	-	BC143273 U09002 NM_001134408	1042769	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	1043124	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	1043613	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.998161	CTCF.p2:12:0.998
chr17	46231156	46231254	reg1020603.p2	7.185	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-46053	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-46220	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-52384	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	276333	-	TSC_hg19_v1_chr17_-_46507604 BC039040	276412	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	377066	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.924953	CTCF.p2:10:0.925
chr3	38688203	38688317	reg1020205.p2	7.185	+	TSC_hg19_v1_chr3_+_38537982 AK315814	-150280	+	BC015820 TSC_hg19_v1_chr3_+_38537851 BC065368 AK023235 AK289602	-150410	+	TSC_hg19_v1_chr3_+_38537830 AK290107 NM_001145464 NM_005107 AB020523 BC104213 BC104212 AK301067 AK308814	-150465	+	M77235 NM_000335 NM_001099404 NM_001099405 NM_198056 BC051374 NM_001160160 NM_001160161	2880	-	AF117907 NM_006514	147240	-	AF109737 AF150882 NM_014139	303791	-	AK315814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC015820|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC065368|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK023235|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK289602|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK290107|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##NM_001145464|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##NM_005107|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AB020523|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC104213|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC104212|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK301067|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK308814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##M77235|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_000335|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099404|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099405|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_198056|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##BC051374|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160160|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160161|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##AF117907|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##NM_006514|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	0.413897	CTCF.p2:4:0.414
chr4	101342683	101342801	reg1018779.p1	7.185	+	AL832277 BC013592 TSC_hg19_v1_chr4_-_101111626 AK312926 AK094236 NM_145244	-231112	-	TSC_hg19_v1_chr4_+_100871641 AK123926	-471096	+	TSC_hg19_v1_chr4_-_100871513 AK056803 NM_002106 BC103743	-471228	-	CU676062 AB590686 AB034695 AK222741 AK304568 AK291831 BC017781 AF205940 AK026875 AK313504 NM_001159694 NM_016242	96418	-	AB385587 AB451338 AB451487 AM393486 AM393713 CU693026 AY904364 BC025714 TSC_hg19_v1_chr4_-_102268080 L14778	925284	-	TSC_hg19_v1_chr4_-_102268343 AL353950	925630	-	AL832277|DDIT4L|115265|DNA-damage-inducible transcript 4-like##BC013592|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK312926|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK094236|DDIT4L|115265|DNA-damage-inducible transcript 4-like##NM_145244|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK123926|LOC256880|256880|uncharacterized LOC256880##AK056803|H2AFZ|3015|H2A histone family, member Z##NM_002106|H2AFZ|3015|H2A histone family, member Z##BC103743|H2AFZ|3015|H2A histone family, member Z##AB034695|EMCN|51705|endomucin##AK222741|EMCN|51705|endomucin##AK304568|EMCN|51705|endomucin##AK291831|EMCN|51705|endomucin##BC017781|EMCN|51705|endomucin##AF205940|EMCN|51705|endomucin##AK026875|EMCN|51705|endomucin##AK313504|EMCN|51705|endomucin##NM_001159694|EMCN|51705|endomucin##NM_016242|EMCN|51705|endomucin##AB451338|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AB451487|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393486|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393713|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AY904364|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##BC025714|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##L14778|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AL353950|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	0.271407	CTCF.p2:-18:0.271
chr1	116524118	116524241	reg1019335.p1	7.184	+	TSC_hg19_v1_chr1_+_116519194 BC070033 AY358258 AY145501 CU693234 DQ892367 DQ895576	-4950	+	NM_018420 BC026358 TSC_hg19_v1_chr1_+_116519161	-5036	+	BC096359 BC096360 TSC_hg19_v1_chr1_-_116383744 M96740 NM_005599	-140459	-	AK096035 NM_152367	130196	+	NM_000701 TSC_hg19_v1_chr1_+_116915824	391632	+	BC003077 TSC_hg19_v1_chr1_+_116915881 BC050359	391703	+	BC070033|SLC22A15|55356|solute carrier family 22, member 15##AY358258|SLC22A15|55356|solute carrier family 22, member 15##AY145501|SLC22A15|55356|solute carrier family 22, member 15##DQ892367|SLC22A15|55356|solute carrier family 22, member 15##DQ895576|SLC22A15|55356|solute carrier family 22, member 15##NM_018420|SLC22A15|55356|solute carrier family 22, member 15##BC026358|SLC22A15|55356|solute carrier family 22, member 15##BC096359|NHLH2|4808|nescient helix loop helix 2##BC096360|NHLH2|4808|nescient helix loop helix 2##M96740|NHLH2|4808|nescient helix loop helix 2##NM_005599|NHLH2|4808|nescient helix loop helix 2##AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_000701|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC003077|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC050359|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.985214	CTCF.p2:31:0.985
chr14	81637051	81637169	reg1017463.p2	7.184	+	AK303378 BC024205 NM_000369 NM_001018036 NM_001142626 M31774 BC108653 BC009237 M73747 M32215 BC063613 AB209207 BC120972 BC120973 BC127628 BC127629 BC141970 S49816 AB384880 AY429111 CU687778 S45272	-215244	+	BC045834 AK309833 TSC_hg19_v1_chr14_-_81408073	-229052	-	NM_152446	-231227	-	D14887 TSC_hg19_v1_chr14_-_81687285 NM_015859 BC050703	50170	-	D14886 NM_201595	50464	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	227716	-	BC024205|TSHR|7253|thyroid stimulating hormone receptor##NM_000369|TSHR|7253|thyroid stimulating hormone receptor##NM_001018036|TSHR|7253|thyroid stimulating hormone receptor##NM_001142626|TSHR|7253|thyroid stimulating hormone receptor##M31774|TSHR|7253|thyroid stimulating hormone receptor##BC108653|TSHR|7253|thyroid stimulating hormone receptor##BC009237|TSHR|7253|thyroid stimulating hormone receptor##M73747|TSHR|7253|thyroid stimulating hormone receptor##M32215|TSHR|7253|thyroid stimulating hormone receptor##BC063613|TSHR|7253|thyroid stimulating hormone receptor##AB209207|TSHR|7253|thyroid stimulating hormone receptor##BC120972|TSHR|7253|thyroid stimulating hormone receptor##BC120973|TSHR|7253|thyroid stimulating hormone receptor##BC127628|TSHR|7253|thyroid stimulating hormone receptor##BC127629|TSHR|7253|thyroid stimulating hormone receptor##BC141970|TSHR|7253|thyroid stimulating hormone receptor##S49816|TSHR|7253|thyroid stimulating hormone receptor##AY429111|TSHR|7253|thyroid stimulating hormone receptor##S45272|TSHR|7253|thyroid stimulating hormone receptor##BC045834|CEP128|145508|centrosomal protein 128kDa##AK309833|CEP128|145508|centrosomal protein 128kDa##NM_152446|CEP128|145508|centrosomal protein 128kDa##D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##D14886|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_201595|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2	0.881847	CTCF.p2:7:0.882
chr16	78156833	78156975	reg1021776.p1	7.184	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-23449	+	NM_001244755	-93919	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	-100454	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	1477711	-	AF125108 NM_130897 BC054892 BC035232	2417984	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	2681143	-	NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2	0.965304	CTCF.p2:-34:0.965
chr18	56067339	56067485	reg1022049.p1	7.184	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-178562	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-178609	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-178650	+	BX647796 NM_052947	228776	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	271229	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	271316	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.989479	CTCF.p2:-9:0.989
chr20	5037481	5037585	reg1018599.p1	7.184	+	BC013112 AF164142 NM_203327	-46608	-	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	-55373	-	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	-233339	-	TSC_hg19_v1_chr20_-_5093685 AY359115 BC015113 AK055700 BC110408 BC011990 BC009768 BC009770 AF161392 BC009769 AK315606 BC066317 AK309823 BC070212 NM_001009923 NM_001009924 NM_001009925 NM_014145	56082	-	CR536501 CR541799 AB464071 DQ891403 DQ894581 M15796 TSC_hg19_v1_chr20_-_5100605 BC000491 BC062439 D28458 AK313286 M29310 NM_182649	63022	-	AK300558 AK311014 NM_002592	69693	-	BC013112|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AF164142|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_203327|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY359115|C20orf30|29058|chromosome 20 open reading frame 30##BC015113|C20orf30|29058|chromosome 20 open reading frame 30##AK055700|C20orf30|29058|chromosome 20 open reading frame 30##BC110408|C20orf30|29058|chromosome 20 open reading frame 30##BC011990|C20orf30|29058|chromosome 20 open reading frame 30##BC009768|C20orf30|29058|chromosome 20 open reading frame 30##BC009770|C20orf30|29058|chromosome 20 open reading frame 30##AF161392|C20orf30|29058|chromosome 20 open reading frame 30##BC009769|C20orf30|29058|chromosome 20 open reading frame 30##AK315606|C20orf30|29058|chromosome 20 open reading frame 30##BC066317|C20orf30|29058|chromosome 20 open reading frame 30##AK309823|C20orf30|29058|chromosome 20 open reading frame 30##BC070212|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009923|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009924|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009925|C20orf30|29058|chromosome 20 open reading frame 30##NM_014145|C20orf30|29058|chromosome 20 open reading frame 30##CR536501|PCNA|5111|proliferating cell nuclear antigen##CR541799|PCNA|5111|proliferating cell nuclear antigen##DQ891403|PCNA|5111|proliferating cell nuclear antigen##DQ894581|PCNA|5111|proliferating cell nuclear antigen##M15796|PCNA|5111|proliferating cell nuclear antigen##BC000491|PCNA|5111|proliferating cell nuclear antigen##BC062439|PCNA|5111|proliferating cell nuclear antigen##D28458|PCNA|5111|proliferating cell nuclear antigen##AK313286|PCNA|5111|proliferating cell nuclear antigen##NM_182649|PCNA|5111|proliferating cell nuclear antigen##AK300558|PCNA|5111|proliferating cell nuclear antigen##NM_002592|PCNA|5111|proliferating cell nuclear antigen	0.267534	CTCF.p2:-2:0.268
chr3	134474140	134474231	reg1017965.p2	7.184	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-104340	-	AK023448 BC068997 TSC_hg19_v1_chr3_+_134205041 NM_025180 AK056465	-269161	+	TSC_hg19_v1_chr3_+_134204899 NM_001042400	-269301	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	39966	+	TSC_hg19_v1_chr3_+_134514301 BC111744	40116	+	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	1210346	+	BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##AK023448|CEP63|80254|centrosomal protein 63kDa##BC068997|CEP63|80254|centrosomal protein 63kDa##NM_025180|CEP63|80254|centrosomal protein 63kDa##AK056465|CEP63|80254|centrosomal protein 63kDa##NM_001042400|CEP63|80254|centrosomal protein 63kDa##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC111744|EPHB1|2047|EPH receptor B1##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.56551	CTCF.p2:-10:0.553
chr11	107434473	107434603	reg1018991.p1	7.183	+	AK293001 TSC_hg19_v1_chr11_-_107328552 BX649022 BX647832 BC107418 BC070142 BX648704 AK126881 NM_152434	-105999	-	BC085622 TSC_hg19_v1_chr11_-_106889260 BC130484 BC130488 BC144033 NM_000855 X63282 Z50053	-545450	-	NM_152433 NM_198439	-1486074	-	AK293603 TSC_hg19_v1_chr11_-_107436464 BC015183 AK304413 AB218768 AK095523 NM_138775	1906	-	TSC_hg19_v1_chr11_+_107461813 AK297351 NM_001130037 NM_018712	27273	+	TSC_hg19_v1_chr11_+_107461998 AK303689 AK054794	27447	+	AK293001|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX649022|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX647832|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC107418|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC070142|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX648704|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK126881|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##NM_152434|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC130484|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC130488|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC144033|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_000855|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##X63282|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##Z50053|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_152433|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##NM_198439|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##AK293603|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##BC015183|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK304413|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AB218768|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK095523|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##NM_138775|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK303689|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK054794|ELMOD1|55531|ELMO/CED-12 domain containing 1	0.630533	CTCF.p2:3:0.631
chr13	60971012	60971133	reg1017749.p1	7.183	+	BX537910 NM_001146071 NM_030794	-482	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-232971	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	-233091	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	407	+	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	1018181	-	AK289924 NM_022843	1018582	-	BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20	0.041162	
chr1	7868454	7868570	reg1019393.p1	7.183	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	-23687	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	-24103	+	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	-37136	+	AF104118 AY358375 NM_006786	44586	-	AF140630 BC126443 BC171734 NM_021995	45008	-	TSC_hg19_v1_chr1_-_7973315 BC025776	104788	-	AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AF104118|UTS2|10911|urotensin 2##AY358375|UTS2|10911|urotensin 2##NM_006786|UTS2|10911|urotensin 2##AF140630|UTS2|10911|urotensin 2##BC126443|UTS2|10911|urotensin 2##BC171734|UTS2|10911|urotensin 2##NM_021995|UTS2|10911|urotensin 2##BC025776|UTS2|10911|urotensin 2	0.0	
chr21	40497980	40498111	reg1019739.p1	7.183	+	TSC_hg19_v1_chr21_+_40177852 NM_005239 BC042954 AK315563 BC017040	-320168	+	J04102 TSC_hg19_v1_chr21_+_40177830	-320248	+	AY204740 AY204741 AY204742 AY204743 NM_001243432 TSC_hg19_v1_chr21_-_40033677 AK297807 NM_001136154 NM_004449	-464385	-	CU678538 AB451468 AF417108 AY463963 CR541821 CR541852 DQ892311 DQ895511 TSC_hg19_v1_chr21_-_40555337	57277	-	TSC_hg19_v1_chr21_-_40555341 AK315406	57295	-	TSC_hg19_v1_chr21_-_40555343 BC010424 BC003619 BC011755 BC012809 AJ006291 AK001455 AK308614 NM_003720 NM_203433	57356	-	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##J04102|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AY204740|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204741|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204742|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204743|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243432|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK297807|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136154|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_004449|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AB451468|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AF417108|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AY463963|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541821|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541852|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ892311|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ895511|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AK315406|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC010424|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC003619|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC011755|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC012809|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AJ006291|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AK001455|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AK308614|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##NM_003720|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##NM_203433|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1	0.982666	CTCF.p2:19:0.983
chr4	39979596	39979714	reg1013703.p2	7.183	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-62	-	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	-317	-	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	-279851	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	78877	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	218986	+	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	357790	+	BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9	0.035731	
chr5	125828681	125828777	reg1020051.p1	7.183	+	NM_001146322 AK303857	-27913	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	-69542	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	-69886	+	TSC_hg19_v1_chr5_-_125930891 AB489160 EU831757 EU831835 S74728 BC073174 BC071712 AK295526 BC002515 AK312459 AK297365 NM_001182 NM_001201377 NM_001202404	102127	-	AK023255 NM_032177 TSC_hg19_v1_chr5_+_125936641 BC021161 AK024065 AK298497 AK225464 CR457305 DQ893213 DQ896542	107903	+	BC130495 BC130497 AK131015 NM_207408 HQ258080	138686	+	NM_001146322|GRAMD3|65983|GRAM domain containing 3##AK303857|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##EU831757|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##EU831835|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##S74728|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC073174|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC071712|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK295526|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC002515|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK312459|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK297365|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001182|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001201377|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001202404|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK023255|PHAX|51808|phosphorylated adaptor for RNA export##NM_032177|PHAX|51808|phosphorylated adaptor for RNA export##BC021161|PHAX|51808|phosphorylated adaptor for RNA export##AK024065|PHAX|51808|phosphorylated adaptor for RNA export##AK298497|PHAX|51808|phosphorylated adaptor for RNA export##AK225464|PHAX|51808|phosphorylated adaptor for RNA export##CR457305|PHAX|51808|phosphorylated adaptor for RNA export##DQ893213|PHAX|51808|phosphorylated adaptor for RNA export##DQ896542|PHAX|51808|phosphorylated adaptor for RNA export##BC130495|C5orf48|389320|chromosome 5 open reading frame 48##BC130497|C5orf48|389320|chromosome 5 open reading frame 48##AK131015|C5orf48|389320|chromosome 5 open reading frame 48##NM_207408|C5orf48|389320|chromosome 5 open reading frame 48##HQ258080|C5orf48|389320|chromosome 5 open reading frame 48	0.838875	CTCF.p2:5:0.839
chr8	80565079	80565206	reg1022785.p1	7.183	+	AK292737 TSC_hg19_v1_chr8_+_80523376 BC006302 S82024 AB528346 BT020034 CR456833 DQ892719 DQ895968 CU675343	-41739	+	TSC_hg19_v1_chr8_+_80523354 AK297594 AK308557 AK297485	-41783	+	AK299500 TSC_hg19_v1_chr8_+_80523339	-41803	+	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	114855	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	377360	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	427887	-	AK292737|STMN2|11075|stathmin-like 2##BC006302|STMN2|11075|stathmin-like 2##S82024|STMN2|11075|stathmin-like 2##BT020034|STMN2|11075|stathmin-like 2##CR456833|STMN2|11075|stathmin-like 2##DQ892719|STMN2|11075|stathmin-like 2##DQ895968|STMN2|11075|stathmin-like 2##AK297594|STMN2|11075|stathmin-like 2##AK308557|STMN2|11075|stathmin-like 2##AK297485|STMN2|11075|stathmin-like 2##AK299500|STMN2|11075|stathmin-like 2##AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52	0.535856	CTCF.p2:13:0.536
chr10	112316910	112317029	reg1018474.p2	7.182	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-59218	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-252269	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-252376	-	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	10523	+	AF067163 TSC_hg19_v1_chr10_+_112344155	27146	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	87160	+	NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20	0.977774	CTCF.p2:-9:0.978
chr19	33239570	33239683	reg1020100.p1	7.182	+	NM_001110822 BC049000	-28947	+	TSC_hg19_v1_chr19_+_33182761 NM_001105570	-56849	+	AK124499 NM_207391	-73314	+	BC029802 AF141289 AB033548 AK026446 AK223147 AK313708 BC017962 NM_001126335 NM_001243036 NM_014270	121035	-	BC029978 TSC_hg19_v1_chr19_-_33462855 AK001375 BC136328 AL832158 BC032307 NM_032816	223217	-	AK309396 NM_152266 AK128668 BC020247 BC010170 BC003535	223544	+	NM_001110822|TDRD12|91646|tudor domain containing 12##BC049000|TDRD12|91646|tudor domain containing 12##NM_001105570|NUDT19|390916|nudix (nucleoside diphosphate linked moiety X)-type motif 19##AK124499|RGS9BP|388531|regulator of G protein signaling 9 binding protein##NM_207391|RGS9BP|388531|regulator of G protein signaling 9 binding protein##BC029802|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AF141289|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AB033548|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AK026446|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AK223147|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AK313708|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##BC017962|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##NM_001126335|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##NM_001243036|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##NM_014270|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##BC029978|CEP89|84902|centrosomal protein 89kDa##BC136328|CEP89|84902|centrosomal protein 89kDa##AL832158|CEP89|84902|centrosomal protein 89kDa##BC032307|CEP89|84902|centrosomal protein 89kDa##NM_032816|CEP89|84902|centrosomal protein 89kDa##NM_152266|C19orf40|91442|chromosome 19 open reading frame 40##AK128668|C19orf40|91442|chromosome 19 open reading frame 40##BC020247|C19orf40|91442|chromosome 19 open reading frame 40##BC010170|C19orf40|91442|chromosome 19 open reading frame 40##BC003535|C19orf40|91442|chromosome 19 open reading frame 40	0.051934	
chr14	77617806	77617900	reg1018875.p1	7.181	+	AK294840 TSC_hg19_v1_chr14_-_77608135 AK095612 NM_174976	-9718	-	BC117676 TSC_hg19_v1_chr14_-_77608072	-9838	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	-53208	+	TSC_hg19_v1_chr14_+_77648082 NM_020431	30239	+	TSC_hg19_v1_chr14_+_77648137 AK125159 BC136613 BC136614	30320	+	TSC_hg19_v1_chr14_-_77737552 AF422797 NM_021257	119748	-	AK294840|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK095612|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_174976|ZDHHC22|283576|zinc finger, DHHC-type containing 22##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##NM_020431|TMEM63C|57156|transmembrane protein 63C##AK125159|TMEM63C|57156|transmembrane protein 63C##BC136613|TMEM63C|57156|transmembrane protein 63C##BC136614|TMEM63C|57156|transmembrane protein 63C##AF422797|NGB|58157|neuroglobin##NM_021257|NGB|58157|neuroglobin	0.022865	
chr1	152430998	152431104	reg1019310.p1	7.180	+	AF077831 AK291301 AK298640 AK316568 BC030807 NM_016190	-44313	-	AY827490 NM_001014342	-98570	-	L01090 NM_002016	-133373	-	NM_178438	52268	+	AJ243662 NM_019060	55926	+	BC131716 NM_178435	108186	-	AF077831|CRNN|49860|cornulin##AK291301|CRNN|49860|cornulin##AK298640|CRNN|49860|cornulin##AK316568|CRNN|49860|cornulin##BC030807|CRNN|49860|cornulin##NM_016190|CRNN|49860|cornulin##AY827490|FLG2|388698|filaggrin family member 2##NM_001014342|FLG2|388698|filaggrin family member 2##L01090|FLG|2312|filaggrin##NM_002016|FLG|2312|filaggrin##NM_178438|LCE5A|254910|late cornified envelope 5A##AJ243662|CRCT1|54544|cysteine-rich C-terminal 1##NM_019060|CRCT1|54544|cysteine-rich C-terminal 1##BC131716|LCE3E|353145|late cornified envelope 3E##NM_178435|LCE3E|353145|late cornified envelope 3E	0.642808	CTCF.p2:16:0.643
chr15	40799365	40799451	reg1014347.p1	7.180	+	NM_130468 AB066595 BC049214 TSC_hg19_v1_chr15_+_40763222 BC053633 AF282905 AK074739 CU690606 AF401222 AY358446 BC023653	-36066	+	TSC_hg19_v1_chr15_+_40733353 BC022782 NM_014952	-66045	+	TSC_hg19_v1_chr15_+_40698024 AK315296 BT007145 DQ892577 DQ895793	-101360	+	AK092214 AX747411 AL832032 AK098781 TSC_hg19_v1_chr15_-_40857211	57794	-	TSC_hg19_v1_chr15_-_40857235 AK312842 AK293079 NM_001080791 NM_001080792 NM_052849	57832	-	TSC_hg19_v1_chr15_+_40861497 AK301383	62090	+	NM_130468|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AB066595|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC049214|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC053633|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AF282905|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AK074739|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AF401222|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AY358446|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC023653|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC022782|BAHD1|22893|bromo adjacent homology domain containing 1##NM_014952|BAHD1|22893|bromo adjacent homology domain containing 1##AK315296|IVD|3712|isovaleryl-CoA dehydrogenase##BT007145|IVD|3712|isovaleryl-CoA dehydrogenase##DQ892577|IVD|3712|isovaleryl-CoA dehydrogenase##DQ895793|IVD|3712|isovaleryl-CoA dehydrogenase##AK092214|C15orf57|90416|chromosome 15 open reading frame 57##AL832032|C15orf57|90416|chromosome 15 open reading frame 57##AK098781|C15orf57|90416|chromosome 15 open reading frame 57##AK312842|C15orf57|90416|chromosome 15 open reading frame 57##AK293079|C15orf57|90416|chromosome 15 open reading frame 57##NM_001080791|C15orf57|90416|chromosome 15 open reading frame 57##NM_001080792|C15orf57|90416|chromosome 15 open reading frame 57##NM_052849|C15orf57|90416|chromosome 15 open reading frame 57##AK301383|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	0.559613	CTCF.p2:25:0.560
chr1	89439351	89439503	reg1020872.p1	7.180	+	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	-82154	-	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	-82216	-	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	-289332	+	TSC_hg19_v1_chr1_-_89458288 AL833593 BC012942 CR627392 AK301326 AK315917 AK057176 AY028624	18932	-	NM_001008661 NM_001008662 NM_001162536 NM_019610	19215	-	JF927951 BC140837 BC144650 BC063819 CR936758 AK001823 BC017992 AK309096 AL136680 CR936755 NM_018284	49053	-	AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AL833593|CCBL2|56267|cysteine conjugate-beta lyase 2##BC012942|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##CR627392|CCBL2|56267|cysteine conjugate-beta lyase 2##AK301326|CCBL2|56267|cysteine conjugate-beta lyase 2##AK315917|CCBL2|56267|cysteine conjugate-beta lyase 2##AK057176|CCBL2|56267|cysteine conjugate-beta lyase 2##AY028624|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001008661|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001008662|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001162536|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##NM_019610|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##JF927951|GBP3|2635|guanylate binding protein 3##BC140837|GBP3|2635|guanylate binding protein 3##BC144650|GBP3|2635|guanylate binding protein 3##BC063819|GBP3|2635|guanylate binding protein 3##CR936758|GBP3|2635|guanylate binding protein 3##AK001823|GBP3|2635|guanylate binding protein 3##BC017992|GBP3|2635|guanylate binding protein 3##AK309096|GBP3|2635|guanylate binding protein 3##AL136680|GBP3|2635|guanylate binding protein 3##CR936755|GBP3|2635|guanylate binding protein 3##NM_018284|GBP3|2635|guanylate binding protein 3	0.98645	CTCF.p2:-17:0.986
chr2	96456099	96456211	reg1017407.p2	7.180	+	BC015353 NM_138800	-198390	+	NM_001164464	-305677	-	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	-387676	+	TSC_hg19_v1_chr2_-_96482383 BC117383 BC126153 AK057596	26290	-	TSC_hg19_v1_chr2_-_96657677 AK302433	201467	-	TSC_hg19_v1_chr2_+_96676311 BC015216	220169	+	BC015353|TRIM43|129868|tripartite motif containing 43##NM_138800|TRIM43|129868|tripartite motif containing 43##NM_001164464|TRIM43B|653192|tripartite motif containing 43B##AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##AK057596|LINC00342|150759|long intergenic non-protein coding RNA 342##AK302433|ANKRD36C|400986|ankyrin repeat domain 36C	0.0	
chr7	140004445	140004551	reg1018917.p2	7.180	+	TSC_hg19_v1_chr7_+_139877154 AK026372	-127342	+	TSC_hg19_v1_chr7_-_139876751 AB528281 AK131497 NM_030647	-127636	-	BC081541 NM_022750	-240978	-	AL136583 AL136583 TSC_hg19_v1_chr7_-_140098295 AK299276 BC028380 BC028380 BC046567 BC046567 AK296543 AK300265 AK074823 AK074823 NM_032295 NM_207113	93801	-	NM_001008749	99344	+	TSC_hg19_v1_chr7_-_140179165 AB209298 AB527778 DQ892404 EU176516 BC064838 AM236048 BC037400 BC051821 BC012398 AK297361 AK315552	174664	-	AK026372|LOC100134229|100134229|uncharacterized LOC100134229##AK131497|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)##NM_030647|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)##BC081541|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##NM_022750|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK299276|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK296543|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK300265|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_032295|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_207113|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_001008749|RAB19|401409|RAB19, member RAS oncogene family##AB209298|MKRN1|23608|makorin ring finger protein 1##DQ892404|MKRN1|23608|makorin ring finger protein 1##EU176516|MKRN1|23608|makorin ring finger protein 1##BC064838|MKRN1|23608|makorin ring finger protein 1##AM236048|MKRN1|23608|makorin ring finger protein 1##BC037400|MKRN1|23608|makorin ring finger protein 1##BC051821|MKRN1|23608|makorin ring finger protein 1##BC012398|MKRN1|23608|makorin ring finger protein 1##AK297361|MKRN1|23608|makorin ring finger protein 1##AK315552|MKRN1|23608|makorin ring finger protein 1	0.03335	
chr14	29078536	29078660	reg1020204.p1	7.179	+	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	-2011610	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	-3559360	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-3975180	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	157630	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	158315	+	TSC_hg19_v1_chr14_+_29241992 BX248251	163397	+	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23	0.987884	CTCF.p2:29:0.988
chr2	19745390	19745537	reg1019915.p1	7.179	+	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	-187084	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	-974653	-	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	-1003547	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	323172	+	TSC_hg19_v1_chr2_-_20101456 BC050088	355965	-	CU691276 BC070381 TSC_hg19_v1_chr2_-_20101717 BC057850 NM_001008237	356218	-	BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946##BC070381|TTC32|130502|tetratricopeptide repeat domain 32##BC057850|TTC32|130502|tetratricopeptide repeat domain 32##NM_001008237|TTC32|130502|tetratricopeptide repeat domain 32	0.013093	
chr22	50675685	50675818	reg1018682.p2	7.179	+	CR456464 BC001099 CU013014 CU013302 TSC_hg19_v1_chr22_+_50640050	-35781	+	TSC_hg19_v1_chr22_+_50639439 AY324823 NM_031454 BC110866 BC051758	-36313	+	TSC_hg19_v1_chr22_+_50624353 BC012445 AL449244 NM_025204 AK292050 AY203945	-51370	+	AB051456 TSC_hg19_v1_chr22_-_50682891	7095	-	TSC_hg19_v1_chr22_-_50682948 BC144488 BC144489 BC150613 AF272887	7221	-	TSC_hg19_v1_chr22_-_50683439 BC151209 NM_020461 AL832617 AK310419	7679	-	CR456464|SELO|83642|selenoprotein O##BC001099|SELO|83642|selenoprotein O##AY324823|SELO|83642|selenoprotein O##NM_031454|SELO|83642|selenoprotein O##BC110866|SELO|83642|selenoprotein O##BC051758|SELO|83642|selenoprotein O##BC012445|TRABD|80305|TraB domain containing##AL449244|TRABD|80305|TraB domain containing##NM_025204|TRABD|80305|TraB domain containing##AK292050|TRABD|80305|TraB domain containing##AY203945|TRABD|80305|TraB domain containing##AB051456|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC144488|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC144489|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC150613|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AF272887|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC151209|TUBGCP6|85378|tubulin, gamma complex associated protein 6##NM_020461|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AL832617|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AK310419|TUBGCP6|85378|tubulin, gamma complex associated protein 6	0.814205	CTCF.p2:2:0.814
chr2	85109371	85109488	reg1017246.p2	7.179	+	TSC_hg19_v1_chr2_-_85108241 NM_001080824 BC051789	-1126	-	TSC_hg19_v1_chr2_-_85108209 AK296608 AK309615	-1222	-	TSC_hg19_v1_chr2_+_84743576 AK094676 NM_001370	-365852	+	NM_021103 AK130949 D28363 TSC_hg19_v1_chr2_+_85132779 AK311952 BC016731 BC107889 S54005 BC016025 M20259 AY453400	23366	+	TSC_hg19_v1_chr2_+_85133055 M92381	23633	+	TSC_hg19_v1_chr2_+_85198299 NM_020122	88855	+	NM_001080824|C2orf89|129293|chromosome 2 open reading frame 89##BC051789|C2orf89|129293|chromosome 2 open reading frame 89##AK296608|C2orf89|129293|chromosome 2 open reading frame 89##AK309615|C2orf89|129293|chromosome 2 open reading frame 89##AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_021103|TMSB10|9168|thymosin beta 10##AK130949|TMSB10|9168|thymosin beta 10##AK311952|TMSB10|9168|thymosin beta 10##BC016731|TMSB10|9168|thymosin beta 10##BC107889|TMSB10|9168|thymosin beta 10##S54005|TMSB10|9168|thymosin beta 10##BC016025|TMSB10|9168|thymosin beta 10##M20259|TMSB10|9168|thymosin beta 10##AY453400|TMSB10|9168|thymosin beta 10##M92381|TMSB10|9168|thymosin beta 10##NM_020122|KCMF1|56888|potassium channel modulatory factor 1	0.999825	CTCF.p2:-1:1.000
chr17	35730727	35730871	reg1000339.p2	7.178	+	TSC_hg19_v1_chr17_-_35716040 AB371587 AK309084 AY315621 AY315622 NM_198836	-14747	-	AY315619 AY315620 NM_198837 NM_198838	-74108	-	AK057229 NM_012138 TSC_hg19_v1_chr17_+_35306253 AF083208 BC000591 AJ249940 AB385572 CU674286 DQ892097 DQ895290	-424500	+	AK096966 BC034672 NM_173625 CU689930	2181	+	AK308905 TSC_hg19_v1_chr17_-_35766928 AY315623 AY315625 AY315626 NM_198834 NM_198839	36076	-	TSC_hg19_v1_chr17_+_35766978 NM_001166105 AK096371 AK225918	36163	+	AB371587|ACACA|31|acetyl-CoA carboxylase alpha##AK309084|ACACA|31|acetyl-CoA carboxylase alpha##AY315621|ACACA|31|acetyl-CoA carboxylase alpha##AY315622|ACACA|31|acetyl-CoA carboxylase alpha##NM_198836|ACACA|31|acetyl-CoA carboxylase alpha##AY315619|ACACA|31|acetyl-CoA carboxylase alpha##AY315620|ACACA|31|acetyl-CoA carboxylase alpha##NM_198837|ACACA|31|acetyl-CoA carboxylase alpha##NM_198838|ACACA|31|acetyl-CoA carboxylase alpha##AK057229|AATF|26574|apoptosis antagonizing transcription factor##NM_012138|AATF|26574|apoptosis antagonizing transcription factor##AF083208|AATF|26574|apoptosis antagonizing transcription factor##BC000591|AATF|26574|apoptosis antagonizing transcription factor##AJ249940|AATF|26574|apoptosis antagonizing transcription factor##DQ892097|AATF|26574|apoptosis antagonizing transcription factor##DQ895290|AATF|26574|apoptosis antagonizing transcription factor##AK096966|C17orf78|284099|chromosome 17 open reading frame 78##BC034672|C17orf78|284099|chromosome 17 open reading frame 78##NM_173625|C17orf78|284099|chromosome 17 open reading frame 78##AK308905|ACACA|31|acetyl-CoA carboxylase alpha##AY315623|ACACA|31|acetyl-CoA carboxylase alpha##AY315625|ACACA|31|acetyl-CoA carboxylase alpha##AY315626|ACACA|31|acetyl-CoA carboxylase alpha##NM_198834|ACACA|31|acetyl-CoA carboxylase alpha##NM_198839|ACACA|31|acetyl-CoA carboxylase alpha##NM_001166105|TADA2A|6871|transcriptional adaptor 2A##AK096371|TADA2A|6871|transcriptional adaptor 2A##AK225918|TADA2A|6871|transcriptional adaptor 2A	0.0	
chr2	129513082	129513218	reg1019715.p1	7.178	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-436850	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-585103	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-664289	+	NM_032144 AL136727	1224085	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	1373708	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	1389461	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.665886	CTCF.p2:11:0.666
chr5	83570841	83570967	reg1019629.p1	7.178	+	AK313713 NM_001884 X17405 X78076 X78075	-553970	-	NM_001126336 NM_001164097 NM_001164098 NM_004385 TSC_hg19_v1_chr5_+_82767562 U16306 U26555 X15998 AK307642 AB209491 BC050524 D32039	-803287	+	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	-1197521	+	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	109342	-	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	109760	-	TSC_hg19_v1_chr5_+_85913757 AK026505	2342854	+	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001126336|VCAN|1462|versican##NM_001164097|VCAN|1462|versican##NM_001164098|VCAN|1462|versican##NM_004385|VCAN|1462|versican##U16306|VCAN|1462|versican##U26555|VCAN|1462|versican##X15998|VCAN|1462|versican##AK307642|VCAN|1462|versican##AB209491|VCAN|1462|versican##BC050524|VCAN|1462|versican##D32039|VCAN|1462|versican##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc	0.042812	
chr15	73598380	73598512	reg1021690.p1	7.177	+	NM_001172623 NM_001172624 NM_002499 U61262 U72391 BC117161 BC143270 BC143271 BC143279 AB528479	-253526	+	TSC_hg19_v1_chr15_-_73076118 AK055526 NM_031284	-522323	-	BC044589 TSC_hg19_v1_chr15_-_73076072	-522375	-	TSC_hg19_v1_chr15_-_73661207 AJ132429 DQ854814	62761	-	AJ238850 NM_005477	63158	-	NM_001042367 AK131030 BC055412	137063	+	NM_001172623|NEO1|4756|neogenin 1##NM_001172624|NEO1|4756|neogenin 1##NM_002499|NEO1|4756|neogenin 1##U61262|NEO1|4756|neogenin 1##U72391|NEO1|4756|neogenin 1##BC117161|NEO1|4756|neogenin 1##BC143270|NEO1|4756|neogenin 1##BC143271|NEO1|4756|neogenin 1##BC143279|NEO1|4756|neogenin 1##AK055526|ADPGK|83440|ADP-dependent glucokinase##NM_031284|ADPGK|83440|ADP-dependent glucokinase##BC044589|ADPGK|83440|ADP-dependent glucokinase##AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60##AK131030|C15orf60|283677|chromosome 15 open reading frame 60##BC055412|C15orf60|283677|chromosome 15 open reading frame 60	0.0	
chr17	69955395	69955542	reg1015412.p2	7.177	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-1789772	+	BC033038 NM_170742	-1854474	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-1884038	+	TSC_hg19_v1_chr17_-_70116937 AL833139	161470	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	161691	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	161702	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.910218	CTCF.p2:-4:0.898
chr3	158848039	158848177	reg1020881.p1	7.177	+	TSC_hg19_v1_chr3_+_158787146 BC137464 BC137469 BC144658	-60957	+	NM_001042705 NM_001042706 NM_001197100 NM_001197113 NM_001197114 AK309049 DQ309553 DQ309554 TSC_hg19_v1_chr3_+_158787130 AK096479	-61021	+	TSC_hg19_v1_chr3_+_158519925 AK301680	-328174	+	BC036535 NM_001197107 NM_001197108 NM_014575 TSC_hg19_v1_chr3_+_158991047	142934	+	TSC_hg19_v1_chr3_+_158991090 AK314662	142983	+	TSC_hg19_v1_chr3_+_159481881 AK309223	633854	+	BC137464|IQCJ|654502|IQ motif containing J##BC137469|IQCJ|654502|IQ motif containing J##BC144658|IQCJ|654502|IQ motif containing J##NM_001042705|IQCJ|654502|IQ motif containing J##NM_001042706|IQCJ|654502|IQ motif containing J##NM_001197100|IQCJ|654502|IQ motif containing J##NM_001197113|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##NM_001197114|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##AK309049|IQCJ|654502|IQ motif containing J##DQ309553|IQCJ|654502|IQ motif containing J##DQ309554|IQCJ|654502|IQ motif containing J##AK096479|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##AK301680|MFSD1|64747|major facilitator superfamily domain containing 1##BC036535|SCHIP1|29970|schwannomin interacting protein 1##NM_001197107|SCHIP1|29970|schwannomin interacting protein 1##NM_001197108|SCHIP1|29970|schwannomin interacting protein 1##NM_014575|SCHIP1|29970|schwannomin interacting protein 1##AK314662|SCHIP1|29970|schwannomin interacting protein 1##AK309223|SCHIP1|29970|schwannomin interacting protein 1	0.062571	
chr1	182167240	182167357	reg1019917.p1	7.176	+	BC137223 BC137224 AK128654 NM_001009992	-136501	-	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-714598	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-1109433	+	TSC_hg19_v1_chr1_-_182354649 AK301600	187384	-	TSC_hg19_v1_chr1_-_182357758 BC127883	190465	-	AY486122 S70290 AB528372 DQ893278 DQ896609 EU832658 EU832735 TSC_hg19_v1_chr1_-_182357935	190605	-	BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase##AY486122|GLUL|2752|glutamate-ammonia ligase##S70290|GLUL|2752|glutamate-ammonia ligase##DQ893278|GLUL|2752|glutamate-ammonia ligase##DQ896609|GLUL|2752|glutamate-ammonia ligase##EU832658|GLUL|2752|glutamate-ammonia ligase##EU832735|GLUL|2752|glutamate-ammonia ligase	0.912512	CTCF.p2:8:0.913
chr15	83172071	83172176	reg1018111.p1	7.176	+	NM_198181 CR936812	-73382	+	CR936602 NM_001164465	-153945	-	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-227233	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	37113	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	68412	-	CU690752 BC050629 NM_030594	144551	-	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	0.999886	CTCF.p2:9:1.000
chr16	57940450	57940592	reg1022080.p1	7.176	+	TSC_hg19_v1_chr16_-_57836404 AK307846 BC001211 AK304132 NM_001130100 NM_005550	-104112	-	TSC_hg19_v1_chr16_-_57836370 AB209290	-104150	-	BC041132 AK299431 AK291737 NM_001130099	-108720	-	U58837 NM_001135639 NM_001297 U18945	64494	-	AY363222 AY363223 NM_199046 NM_199456 BC104458 BC104459	69821	+	AB037809 NM_020807	93240	-	AK307846|KIFC3|3801|kinesin family member C3##BC001211|KIFC3|3801|kinesin family member C3##AK304132|KIFC3|3801|kinesin family member C3##NM_001130100|KIFC3|3801|kinesin family member C3##NM_005550|KIFC3|3801|kinesin family member C3##AB209290|KIFC3|3801|kinesin family member C3##BC041132|KIFC3|3801|kinesin family member C3##AK299431|KIFC3|3801|kinesin family member C3##AK291737|KIFC3|3801|kinesin family member C3##NM_001130099|KIFC3|3801|kinesin family member C3##U58837|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001135639|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001297|CNGB1|1258|cyclic nucleotide gated channel beta 1##U18945|CNGB1|1258|cyclic nucleotide gated channel beta 1##AY363222|TEPP|374739|testis, prostate and placenta expressed##AY363223|TEPP|374739|testis, prostate and placenta expressed##NM_199046|TEPP|374739|testis, prostate and placenta expressed##NM_199456|TEPP|374739|testis, prostate and placenta expressed##BC104458|TEPP|374739|testis, prostate and placenta expressed##BC104459|TEPP|374739|testis, prostate and placenta expressed##AB037809|ZNF319|57567|zinc finger protein 319##NM_020807|ZNF319|57567|zinc finger protein 319	0.900639	CTCF.p2:13:0.901
chr18	8982545	8982725	reg1019740.p1	7.176	+	AB384528 TSC_hg19_v1_chr18_+_8718600	-264111	+	AK131528 NM_015210	-265267	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	-372889	+	TSC_hg19_v1_chr18_+_9102620 NM_021074	119987	+	TSC_hg19_v1_chr18_+_9102715 AK312129 BC001632 BC017487 M22538 AK291865 AB590136 BC071689 DQ892593 DQ895813 CR456928	120085	+	TSC_hg19_v1_chr18_+_9136811 NM_001083625 NM_015208 BC070234 AK024808 AY373757 BC057225 AL834204	154156	+	AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165##NM_021074|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK312129|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC001632|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC017487|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##M22538|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK291865|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC071689|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ892593|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ895813|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##CR456928|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##NM_001083625|ANKRD12|23253|ankyrin repeat domain 12##NM_015208|ANKRD12|23253|ankyrin repeat domain 12##BC070234|ANKRD12|23253|ankyrin repeat domain 12##AK024808|ANKRD12|23253|ankyrin repeat domain 12##AY373757|ANKRD12|23253|ankyrin repeat domain 12##BC057225|ANKRD12|23253|ankyrin repeat domain 12##AL834204|ANKRD12|23253|ankyrin repeat domain 12	0.0	
chr7	38146978	38147158	reg1000288.p1	7.176	+	NM_001242948 AK309180	-186141	+	BC000686 AK290885 TSC_hg19_v1_chr7_+_37960509 DQ914439 AJ250475	-186515	+	AY027862 NM_001242946 NM_017549 TSC_hg19_v1_chr7_+_37960259 BC018299	-186845	+	NM_032016 AK315404 TSC_hg19_v1_chr7_+_38217846	70760	+	TSC_hg19_v1_chr7_+_38217932 AK091579 AX747072 AJ492267 AY358645 BC005959	70890	+	BC062761 BC105589 AF151103 NM_001003799 NM_001003806	166171	-	NM_001242948|EPDR1|54749|ependymin related protein 1 (zebrafish)##AK309180|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC000686|EPDR1|54749|ependymin related protein 1 (zebrafish)##AK290885|EPDR1|54749|ependymin related protein 1 (zebrafish)##DQ914439|EPDR1|54749|ependymin related protein 1 (zebrafish)##AJ250475|EPDR1|54749|ependymin related protein 1 (zebrafish)##AY027862|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_001242946|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_017549|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC018299|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_032016|STARD3NL|83930|STARD3 N-terminal like##AK315404|STARD3NL|83930|STARD3 N-terminal like##AK091579|STARD3NL|83930|STARD3 N-terminal like##AJ492267|STARD3NL|83930|STARD3 N-terminal like##AY358645|STARD3NL|83930|STARD3 N-terminal like##BC005959|STARD3NL|83930|STARD3 N-terminal like##BC062761|TRGV9|6983|T cell receptor gamma variable 9##BC105589|TARP|445347|TCR gamma alternate reading frame protein##AF151103|TARP|445347|TCR gamma alternate reading frame protein##NM_001003799|TARP|445347|TCR gamma alternate reading frame protein##NM_001003806|TARP|445347|TCR gamma alternate reading frame protein	0.0	
chr8	74416810	74416910	reg1019102.p2	7.176	+	TSC_hg19_v1_chr8_+_74207135 AF456765 BC067131 AY358270	-209591	+	TSC_hg19_v1_chr8_+_74206836 NM_172037	-210051	+	CR456773 L16558 AB529035 BC071671 BC071895 BC087837 BC071894 BC001476 BC006095 X57959 AB055763 AK225246 AK225254 AK291119 AK313365 X52967 BC009599 NM_000971	-211003	-	Y19062 TSC_hg19_v1_chr8_-_74659076 AB210014 AL079285 AK002152 AK126149 AK293496 AK303104 AK314617 BC008369 BC008370	242207	-	TSC_hg19_v1_chr8_-_74659103 AK294466 CR627442 NM_001164380 NM_001164381 NM_001164382 NM_001164383 NM_001164385 NM_014393	242298	-	TSC_hg19_v1_chr8_-_74659707 AK307841 AK293729	242836	-	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)##BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)##AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)##NM_172037|RDH10|157506|retinol dehydrogenase 10 (all-trans)##CR456773|RPL7|6129|ribosomal protein L7##L16558|RPL7|6129|ribosomal protein L7##BC071671|RPL7|6129|ribosomal protein L7##BC071895|RPL7|6129|ribosomal protein L7##BC087837|RPL7|6129|ribosomal protein L7##BC071894|RPL7|6129|ribosomal protein L7##BC006095|RPL7|6129|ribosomal protein L7##X57959|RPL7|6129|ribosomal protein L7##AK225246|RPL7|6129|ribosomal protein L7##AK225254|RPL7|6129|ribosomal protein L7##AK291119|RPL7|6129|ribosomal protein L7##AK313365|RPL7|6129|ribosomal protein L7##X52967|RPL7|6129|ribosomal protein L7##BC009599|RPL7|6129|ribosomal protein L7##NM_000971|RPL7|6129|ribosomal protein L7##Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK126149|LOC729696|729696|uncharacterized LOC729696##AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	0.951005	CTCF.p2:3:0.951
chr10	17952329	17952435	reg1020000.p2	7.175	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	-100979	+	NM_001098844 BC157856	-158128	+	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	-266152	+	NM_001098844 BC157856	88839	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	146011	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	288447	+	BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	0.758397	CTCF.p2:-10:0.758
chr21	47390698	47390818	reg1020562.p1	7.175	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	-120870	+	TSC_hg19_v1_chr21_+_47063638 AK310131	-327129	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-428426	-	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	10927	+	TSC_hg19_v1_chr21_+_47518062 NM_001849 NM_058174 NM_058175 BC065509	127292	+	AY029208 EU832113 EU832207 TSC_hg19_v1_chr21_+_47531438	140645	+	AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##AK310131|PCBP3|54039|poly(rC) binding protein 3##U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1##NM_001849|COL6A2|1292|collagen, type VI, alpha 2##NM_058174|COL6A2|1292|collagen, type VI, alpha 2##NM_058175|COL6A2|1292|collagen, type VI, alpha 2##BC065509|COL6A2|1292|collagen, type VI, alpha 2##AY029208|COL6A2|1292|collagen, type VI, alpha 2##EU832113|COL6A2|1292|collagen, type VI, alpha 2##EU832207|COL6A2|1292|collagen, type VI, alpha 2	0.964988	CTCF.p2:-16:0.965
chr22	30085961	30086064	reg1017207.p2	7.175	+	BC020257 TSC_hg19_v1_chr22_+_29999653 BC003112 L11353 Z22664 CR456530 AF122827 AF122828 AF123570 AB587384 CU013130 CU013418 DQ891697 DQ894878 AF369661 AF369662 AF369663 AF369664 AF369665 AF369666 AF369667 AF369668 EF517524 S73853	-86148	+	TSC_hg19_v1_chr22_+_29999621 AF369701	-86398	+	AK297116 TSC_hg19_v1_chr22_+_29999605	-86407	+	TSC_hg19_v1_chr22_+_30116288 BC051805 NM_182527 HQ257899	30338	+	BC009717 TSC_hg19_v1_chr22_-_30162985 AK292671 NM_001003692 NM_019103	76948	-	TSC_hg19_v1_chr22_-_30162997 AK123261	76983	-	BC020257|NF2|4771|neurofibromin 2 (merlin)##BC003112|NF2|4771|neurofibromin 2 (merlin)##L11353|NF2|4771|neurofibromin 2 (merlin)##Z22664|NF2|4771|neurofibromin 2 (merlin)##CR456530|NF2|4771|neurofibromin 2 (merlin)##AF122827|NF2|4771|neurofibromin 2 (merlin)##AF122828|NF2|4771|neurofibromin 2 (merlin)##AF123570|NF2|4771|neurofibromin 2 (merlin)##CU013130|NF2|4771|neurofibromin 2 (merlin)##CU013418|NF2|4771|neurofibromin 2 (merlin)##DQ891697|NF2|4771|neurofibromin 2 (merlin)##DQ894878|NF2|4771|neurofibromin 2 (merlin)##AF369661|NF2|4771|neurofibromin 2 (merlin)##AF369662|NF2|4771|neurofibromin 2 (merlin)##AF369663|NF2|4771|neurofibromin 2 (merlin)##AF369664|NF2|4771|neurofibromin 2 (merlin)##AF369665|NF2|4771|neurofibromin 2 (merlin)##AF369666|NF2|4771|neurofibromin 2 (merlin)##AF369667|NF2|4771|neurofibromin 2 (merlin)##AF369668|NF2|4771|neurofibromin 2 (merlin)##EF517524|NF2|4771|neurofibromin 2 (merlin)##S73853|NF2|4771|neurofibromin 2 (merlin)##AF369701|NF2|4771|neurofibromin 2 (merlin)##AK297116|NF2|4771|neurofibromin 2 (merlin)##BC051805|CABP7|164633|calcium binding protein 7##NM_182527|CABP7|164633|calcium binding protein 7##HQ257899|CABP7|164633|calcium binding protein 7##BC009717|ZMAT5|55954|zinc finger, matrin-type 5##AK292671|ZMAT5|55954|zinc finger, matrin-type 5##NM_001003692|ZMAT5|55954|zinc finger, matrin-type 5##NM_019103|ZMAT5|55954|zinc finger, matrin-type 5	0.999576	CTCF.p2:-8:1.000
chr1	153162999	153163103	reg1019477.p1	7.174	+	BC130455 BC133041 NM_001014291	-39625	-	BC096108 BC096109 BC096110 BC096111 NM_001014450	-77076	-	M20030 NM_001024209	-96051	-	NM_001010857 BC130507 BC130511 BC087854	12890	+	NM_001195571	27008	+	BC108290 NM_000427	69127	+	BC130455|SPRR2G|6706|small proline-rich protein 2G##BC133041|SPRR2G|6706|small proline-rich protein 2G##NM_001014291|SPRR2G|6706|small proline-rich protein 2G##BC096108|SPRR2A|6700|small proline-rich protein 2A##BC096109|SPRR2A|6700|small proline-rich protein 2A##BC096110|SPRR2A|6700|small proline-rich protein 2A##BC096111|SPRR2A|6700|small proline-rich protein 2A##NM_001014450|SPRR2F|6705|small proline-rich protein 2F##M20030|SPRR2E|6704|small proline-rich protein 2E##NM_001024209|SPRR2E|6704|small proline-rich protein 2E##NM_001010857|LELP1|149018|late cornified envelope-like proline-rich 1##BC130507|LELP1|149018|late cornified envelope-like proline-rich 1##BC130511|LELP1|149018|late cornified envelope-like proline-rich 1##BC087854|LELP1|149018|late cornified envelope-like proline-rich 1##NM_001195571|PRR9|574414|proline rich 9##BC108290|LOR|4014|loricrin##NM_000427|LOR|4014|loricrin	0.980237	CTCF.p2:3:0.980
chr2	102918466	102918579	reg1018188.p1	7.174	+	AF284434 NM_003854 U49065 BC107064	-115074	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	-148102	+	TSC_hg19_v1_chr2_+_102759205 X16896	-159290	+	AB012701 NM_016232 AK313967 AK303389	9469	+	BC012580 BC030975 NM_003856 AK291578 AB029084	35209	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	60586	+	AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##X16896|IL1R1|3554|interleukin 1 receptor, type I##AB012701|IL1RL1|9173|interleukin 1 receptor-like 1##NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1##AK313967|IL18R1|8809|interleukin 18 receptor 1##AK303389|IL1RL1|9173|interleukin 1 receptor-like 1##BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1	0.37707	CTCF.p2:5:0.377
chr2	65609955	65610084	reg1019644.p1	7.174	+	TSC_hg19_v1_chr2_-_65593867 NM_001128210	-16121	-	TSC_hg19_v1_chr2_-_65593766 AK299079	-16246	-	NM_001005386 NM_005722 TSC_hg19_v1_chr2_+_65454944 AK295157 AK301634 BC014546 BX649080 AF006082 AK315205 AB462954 EU831978 EU832071	-155084	+	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	49193	-	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	49657	-	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	53818	+	NM_001128210|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK299079|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_001005386|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##NM_005722|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK295157|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK301634|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BC014546|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BX649080|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AF006082|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK315205|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU831978|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU832071|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein	0.0	
chr1	152155048	152155136	reg1016479.p1	7.173	+	AY396742 NM_001122965	-23389	-	NM_007113	-68537	-	BC137493 AY456639 NM_001008536	-93558	-	CR933683 TSC_hg19_v1_chr1_+_152161805	6703	+	AB180729 NM_001009931 AY396741	41577	-	L01090 NM_002016	142586	-	AY396742|RPTN|126638|repetin##NM_001122965|RPTN|126638|repetin##NM_007113|TCHH|7062|trichohyalin##BC137493|TCHHL1|126637|trichohyalin-like 1##AY456639|TCHHL1|126637|trichohyalin-like 1##NM_001008536|TCHHL1|126637|trichohyalin-like 1##AB180729|HRNR|388697|hornerin##NM_001009931|HRNR|388697|hornerin##AY396741|HRNR|388697|hornerin##L01090|FLG|2312|filaggrin##NM_002016|FLG|2312|filaggrin	0.500612	CTCF.p2:13:0.501
chr17	45810423	45810570	reg1019574.p1	7.173	+	TSC_hg19_v1_chr17_+_45773425 AB383985	-37047	+	TSC_hg19_v1_chr17_+_45773067 BC111418	-37457	+	AB018318 BC152407 BC167150 NM_014726	-37867	+	AF093098 NM_013351 AK223634 BC039739 AF241243 AB590854 TSC_hg19_v1_chr17_+_45810959	288	+	BC065482 TSC_hg19_v1_chr17_-_45899130	88628	-	TSC_hg19_v1_chr17_-_45899154 AF323729 AK000267 BC028010 NM_145798 AK289523 AF392446	88689	-	BC111418|TBKBP1|9755|TBK1 binding protein 1##AB018318|TBKBP1|9755|TBK1 binding protein 1##BC152407|TBKBP1|9755|TBK1 binding protein 1##BC167150|TBKBP1|9755|TBK1 binding protein 1##NM_014726|TBKBP1|9755|TBK1 binding protein 1##AF093098|TBX21|30009|T-box 21##NM_013351|TBX21|30009|T-box 21##AK223634|TBX21|30009|T-box 21##BC039739|TBX21|30009|T-box 21##AF241243|TBX21|30009|T-box 21##BC065482|OSBPL7|114881|oxysterol binding protein-like 7##AF323729|OSBPL7|114881|oxysterol binding protein-like 7##BC028010|OSBPL7|114881|oxysterol binding protein-like 7##NM_145798|OSBPL7|114881|oxysterol binding protein-like 7##AK289523|OSBPL7|114881|oxysterol binding protein-like 7##AF392446|OSBPL7|114881|oxysterol binding protein-like 7	0.969894	CTCF.p2:10:0.970
chr2	106724135	106724264	reg1021553.p1	7.173	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	-42035	+	NM_001004720 BC000103	-255938	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	-291224	+	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	86546	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	86559	-	TSC_hg19_v1_chr2_-_106810781 NM_025076	86606	-	BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1	0.0	
chr9	140453687	140453796	reg1018165.p1	7.173	+	NM_032477 TSC_hg19_v1_chr9_+_140446353 BC040035 AY232291	-7382	+	AK125060 AK126267 TSC_hg19_v1_chr9_-_140444881 NM_001098537 NM_152286	-8831	-	AY255128 AY255129 AY255130 AY255131 AY255132 NM_001130969 NM_001130970 NM_001130971 NM_001178064 NM_015537 TSC_hg19_v1_chr9_-_140353787	-99939	-	CU675946 TSC_hg19_v1_chr9_-_140473350 AK307180 BC003123 BC016349 BC017335	19549	-	TSC_hg19_v1_chr9_-_140473377 AK310987 AK308998 AK075115 NM_138778	19631	-	BC012948 AJ298882 AX766496 TSC_hg19_v1_chr9_-_140484953 NM_138462	31191	-	NM_032477|MRPL41|64975|mitochondrial ribosomal protein L41##BC040035|MRPL41|64975|mitochondrial ribosomal protein L41##AY232291|MRPL41|64975|mitochondrial ribosomal protein L41##AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7##AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7##AY255128|NELF|26012|nasal embryonic LHRH factor##AY255129|NELF|26012|nasal embryonic LHRH factor##AY255130|NELF|26012|nasal embryonic LHRH factor##AY255131|NELF|26012|nasal embryonic LHRH factor##AY255132|NELF|26012|nasal embryonic LHRH factor##NM_001130969|NELF|26012|nasal embryonic LHRH factor##NM_001130970|NELF|26012|nasal embryonic LHRH factor##NM_001130971|NELF|26012|nasal embryonic LHRH factor##NM_001178064|NELF|26012|nasal embryonic LHRH factor##NM_015537|NELF|26012|nasal embryonic LHRH factor##AK307180|WDR85|92715|WD repeat domain 85##BC003123|WDR85|92715|WD repeat domain 85##BC016349|WDR85|92715|WD repeat domain 85##BC017335|WDR85|92715|WD repeat domain 85##AK310987|WDR85|92715|WD repeat domain 85##AK308998|WDR85|92715|WD repeat domain 85##AK075115|WDR85|92715|WD repeat domain 85##NM_138778|WDR85|92715|WD repeat domain 85##BC012948|ZMYND19|116225|zinc finger, MYND-type containing 19##AJ298882|ZMYND19|116225|zinc finger, MYND-type containing 19##AX766496|ZMYND19|116225|zinc finger, MYND-type containing 19##NM_138462|ZMYND19|116225|zinc finger, MYND-type containing 19	0.830069	CTCF.p2:-4:0.830
chrX	38051420	38051515	reg1019350.p1	7.173	+	NM_001163334	-158681	+	BX647688 NM_001163335 NM_138780 TSC_hg19_v1_chrX_+_37865853 AK125106	-185617	+	AF049615 NM_012274 BC104428 BC104429 BC113024 BC113025	-201387	+	TSC_hg19_v1_chrX_-_38080117 AB527644 CU676640 U61374 U78093 AK298802 AK289430 BC020684 AK293127 AK125542 NM_001170750 NM_001170751 NM_001170752 NM_006307	28658	-	X97668 CU689206 AJ238395 U57629 TSC_hg19_v1_chrX_-_38186763 BC031624 AK223491 DQ980616	135228	-	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	135328	-	NM_001163334|SYTL5|94122|synaptotagmin-like 5##BX647688|SYTL5|94122|synaptotagmin-like 5##NM_001163335|SYTL5|94122|synaptotagmin-like 5##NM_138780|SYTL5|94122|synaptotagmin-like 5##AK125106|SYTL5|94122|synaptotagmin-like 5##AF049615|CXorf27|25763|chromosome X open reading frame 27##NM_012274|CXorf27|25763|chromosome X open reading frame 27##BC104428|CXorf27|25763|chromosome X open reading frame 27##BC104429|CXorf27|25763|chromosome X open reading frame 27##BC113024|CXorf27|25763|chromosome X open reading frame 27##BC113025|CXorf27|25763|chromosome X open reading frame 27##U61374|SRPX|8406|sushi-repeat containing protein, X-linked##U78093|SRPX|8406|sushi-repeat containing protein, X-linked##AK298802|SRPX|8406|sushi-repeat containing protein, X-linked##AK289430|SRPX|8406|sushi-repeat containing protein, X-linked##BC020684|SRPX|8406|sushi-repeat containing protein, X-linked##AK293127|SRPX|8406|sushi-repeat containing protein, X-linked##AK125542|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked##NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked##X97668|RPGR|6103|retinitis pigmentosa GTPase regulator##AJ238395|RPGR|6103|retinitis pigmentosa GTPase regulator##U57629|RPGR|6103|retinitis pigmentosa GTPase regulator##BC031624|RPGR|6103|retinitis pigmentosa GTPase regulator##AK223491|RPGR|6103|retinitis pigmentosa GTPase regulator##DQ980616|RPGR|6103|retinitis pigmentosa GTPase regulator##DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator	0.830866	CTCF.p2:-11:0.831
chr17	77965570	77965649	reg1020046.p1	7.172	+	BC044939 TSC_hg19_v1_chr17_+_77893233	-72410	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	-152467	-	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-194702	-	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	43993	-	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	44839	+	TSC_hg19_v1_chr17_+_78075349 NM_000152 NM_001079803 NM_001079804	109717	+	AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40##NM_000152|GAA|2548|glucosidase, alpha; acid##NM_001079803|GAA|2548|glucosidase, alpha; acid##NM_001079804|GAA|2548|glucosidase, alpha; acid	1.006146	CTCF.p2:-17:0.994
chr3	134959404	134959519	reg1019959.p2	7.172	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-445160	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-445310	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-589616	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	725070	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	725159	+	NM_181897 AK316258 L12146	782157	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.029941	
chr6	96267969	96268070	reg1020001.p1	7.172	+	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	-242618	+	TSC_hg19_v1_chr6_-_96025325 BC047582	-242730	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	-2138836	-	NM_006581 AK314966 TSC_hg19_v1_chr6_+_96463867 BC001879 BC036101 AB023021	195848	+	TSC_hg19_v1_chr6_+_96969716 NM_015323 BC015377 AK307651 BC036379 BC028608	701680	+	TSC_hg19_v1_chr6_+_96969734 AB018319 CU690338	701720	+	NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##NM_015323|UFL1|23376|UFM1-specific ligase 1##BC015377|UFL1|23376|UFM1-specific ligase 1##AK307651|UFL1|23376|UFM1-specific ligase 1##BC036379|UFL1|23376|UFM1-specific ligase 1##BC028608|UFL1|23376|UFM1-specific ligase 1##AB018319|UFL1|23376|UFM1-specific ligase 1	0.869245	CTCF.p2:4:0.869
chr8	12345469	12345588	reg1022367.p1	7.172	+	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-51624	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-51685	-	DQ012022 NM_001037804 NM_001195257	-169704	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	267476	-	AK296010 NM_020844	457638	+	AB040889 NM_001099677	524244	+	BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456	0.0	
chr8	95007033	95007127	reg1015464.p1	7.172	+	NM_001161778 AB590483 TSC_hg19_v1_chr8_+_94930074 AK302651	-77045	+	NM_018444 TSC_hg19_v1_chr8_+_94929171 BC047619 NM_001161780 AK057079 NM_001161779 BC064978 AF155661 NM_001161781	-77900	+	AK308071 NM_001142301 NM_153704 AK092244 AX747428 TSC_hg19_v1_chr8_+_94767121 AK308735 BX648768 BC031220 BC017974 BC054338 AK094935 BC032835	-239966	+	U07969 BC112013 BC113464 TSC_hg19_v1_chr8_-_95220784 X83228 AK301001 NM_004063	213714	-	AK312873 NM_001144663	222450	-	U10550 TSC_hg19_v1_chr8_-_95274525	267442	-	NM_001161778|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK302651|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_018444|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC047619|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161780|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK057079|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161779|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC064978|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AF155661|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161781|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK308071|TMEM67|91147|transmembrane protein 67##NM_001142301|TMEM67|91147|transmembrane protein 67##NM_153704|TMEM67|91147|transmembrane protein 67##AK092244|TMEM67|91147|transmembrane protein 67##AK308735|TMEM67|91147|transmembrane protein 67##BX648768|TMEM67|91147|transmembrane protein 67##BC031220|TMEM67|91147|transmembrane protein 67##BC017974|TMEM67|91147|transmembrane protein 67##BC054338|TMEM67|91147|transmembrane protein 67##AK094935|TMEM67|91147|transmembrane protein 67##BC032835|TMEM67|91147|transmembrane protein 67##U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle	0.91964	CTCF.p2:0:0.920
chr11	134738585	134738718	reg1023252.p1	7.171	+	AB029396 BC010466 NM_018644 NM_054025 TSC_hg19_v1_chr11_-_134281917	-456830	-	AK074855 AK074855 TSC_hg19_v1_chr11_+_134201905 AK074947 AK074947	-536731	+	NM_138342 BC040641 BC040641 AK074703 AK074703 TSC_hg19_v1_chr11_+_134201886 AY358497 AY358497	-536823	+	None	None	None	None	None	None	None	None	None	AB029396|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##BC010466|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##NM_018644|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##NM_054025|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##AK074855|GLB1L2|89944|galactosidase, beta 1-like 2##AK074855|GLB1L2|89944|galactosidase, beta 1-like 2##AK074947|GLB1L2|89944|galactosidase, beta 1-like 2##AK074947|GLB1L2|89944|galactosidase, beta 1-like 2##NM_138342|GLB1L2|89944|galactosidase, beta 1-like 2##BC040641|GLB1L2|89944|galactosidase, beta 1-like 2##BC040641|GLB1L2|89944|galactosidase, beta 1-like 2##AK074703|GLB1L2|89944|galactosidase, beta 1-like 2##AK074703|GLB1L2|89944|galactosidase, beta 1-like 2##AY358497|GLB1L2|89944|galactosidase, beta 1-like 2##AY358497|GLB1L2|89944|galactosidase, beta 1-like 2	0.0	
chr14	20346309	20346480	reg1019744.p1	7.171	+	BC136941 BC136942 NM_001005501	-1986	+	AB463965 NM_001004723	-50787	+	BC136987 NM_001005500	-97954	+	BC140947 NM_001005483	42358	+	BC151145 NM_001004063	57372	+	BC140726 NM_001005486	97245	+	BC136941|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2##BC136942|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2##NM_001005501|OR4K2|390431|olfactory receptor, family 4, subfamily K, member 2##NM_001004723|OR4N2|390429|olfactory receptor, family 4, subfamily N, member 2##BC136987|OR4M1|441670|olfactory receptor, family 4, subfamily M, member 1##NM_001005500|OR4M1|441670|olfactory receptor, family 4, subfamily M, member 1##BC140947|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5##NM_001005483|OR4K5|79317|olfactory receptor, family 4, subfamily K, member 5##BC151145|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1##NM_001004063|OR4K1|79544|olfactory receptor, family 4, subfamily K, member 1##BC140726|OR4K15|81127|olfactory receptor, family 4, subfamily K, member 15##NM_001005486|OR4K15|81127|olfactory receptor, family 4, subfamily K, member 15	0.989202	CTCF.p2:-5:0.989
chr16	4452789	4452895	reg1019145.p1	7.171	+	AY166584 CU686679 TSC_hg19_v1_chr16_+_4431007 BC013767	-21856	+	TSC_hg19_v1_chr16_+_4421848 BC068575 NM_138440 AY358298 AY358299	-30942	+	TSC_hg19_v1_chr16_-_4401268 AF151894 AF349455 BC005024 AK026514 NM_016069	-51524	-	TSC_hg19_v1_chr16_-_4465899 AK094596	13045	-	HQ258676 TSC_hg19_v1_chr16_-_4466550	13702	-	AK025674 TSC_hg19_v1_chr16_-_4466581 BC117289 BC117291 BC032732 AK097238	13740	-	AY166584|VASN|114990|vasorin##BC013767|VASN|114990|vasorin##BC068575|VASN|114990|vasorin##NM_138440|VASN|114990|vasorin##AY358298|VASN|114990|vasorin##AY358299|VASN|114990|vasorin##AF151894|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AF349455|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##BC005024|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AK026514|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##NM_016069|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AK094596|CORO7|79585|coronin 7##HQ258676|CORO7|79585|coronin 7##AK025674|CORO7|79585|coronin 7##BC117289|CORO7|79585|coronin 7##BC117291|CORO7|79585|coronin 7##BC032732|CORO7-PAM16|100529144|CORO7-PAM16 readthrough##AK097238|CORO7|79585|coronin 7	0.925728	CTCF.p2:6:0.926
chr6	144261274	144261397	reg1019458.p1	7.171	+	BC146950 BC146969 BC171862 NM_001013623	-75763	+	TSC_hg19_v1_chr6_+_144164521 AK300360	-96799	+	TSC_hg19_v1_chr6_+_144164476 AK095269 BC009855 NM_032860	-96846	+	EF100446 EF100447 EF100448 EF100449 EF100450 EF100451 EF100452 TSC_hg19_v1_chr6_-_144329322	67953	-	TSC_hg19_v1_chr6_-_144329394 AK314570 BC059359 AK096331 NM_001080952 NM_001080953 NM_001080954 NM_001080956 NM_002656 NM_006718 AJ311395 U72621	68129	-	EF100438 EF100439 EF100440 EF100441 EF100442 EF100443 EF100444 EF100445 TSC_hg19_v1_chr6_-_144385724 NM_001080951 NM_001080955	124355	-	BC146950|C6orf94|153918|chromosome 6 open reading frame 94##BC146969|C6orf94|153918|chromosome 6 open reading frame 94##BC171862|C6orf94|153918|chromosome 6 open reading frame 94##NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94##AK300360|LTV1|84946|LTV1 homolog (S. cerevisiae)##BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)##NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)##EF100446|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100447|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100448|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100449|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100450|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100451|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100452|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AK314570|PLAGL1|5325|pleiomorphic adenoma gene-like 1##BC059359|HYMAI|57061|hydatidiform mole associated and imprinted (non-protein coding)##AK096331|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080952|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080953|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080954|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080956|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_002656|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_006718|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AJ311395|PLAGL1|5325|pleiomorphic adenoma gene-like 1##U72621|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100438|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100439|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100440|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100441|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100442|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100443|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100444|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100445|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080951|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080955|PLAGL1|5325|pleiomorphic adenoma gene-like 1	0.849527	CTCF.p2:-10:0.812
chr2	101346875	101346998	reg1021784.p1	7.170	+	TSC_hg19_v1_chr2_+_101179454 NM_024065 BC001021 AK300827 AF110511 AF267853	-167500	+	AB164464 NM_001011717	-259993	+	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	-312839	-	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	89830	+	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	271786	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	420847	-	NM_024065|PDCL3|79031|phosducin-like 3##BC001021|PDCL3|79031|phosducin-like 3##AK300827|PDCL3|79031|phosducin-like 3##AF110511|PDCL3|79031|phosducin-like 3##AF267853|PDCL3|79031|phosducin-like 3##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S##BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)	0.173002	
chr2	182819122	182819224	reg1019752.p2	7.170	+	TSC_hg19_v1_chr2_+_182756689 BC052581 BC064499 BC028706 AK291745 BX647257 AB116937 AB385517 BX647967 AK304238 BX648888	-62380	+	TSC_hg19_v1_chr2_+_182756494 NM_001130445 NM_006751 AK093143 AX747951 AB067514	-62642	+	BC009046 TSC_hg19_v1_chr2_-_182545243 AB593068 AB593070 AB593071 AK313799 AB593069 D82347 HQ426678 JF290420 NM_002500	-273872	-	NM_001080545 AK129898 AF494535 BX647581 BC017943	31476	+	AK295657 AB384753 DQ892369 DQ893372 DQ895578 DQ896694 AF110237 NM_005019 BC022480 AF110240 AF110236 NM_001003683 U40370 AK294239	568111	-	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	761901	+	BC052581|SSFA2|6744|sperm specific antigen 2##BC064499|SSFA2|6744|sperm specific antigen 2##BC028706|SSFA2|6744|sperm specific antigen 2##AK291745|SSFA2|6744|sperm specific antigen 2##BX647257|SSFA2|6744|sperm specific antigen 2##AB116937|SSFA2|6744|sperm specific antigen 2##BX647967|SSFA2|6744|sperm specific antigen 2##AK304238|SSFA2|6744|sperm specific antigen 2##BX648888|SSFA2|6744|sperm specific antigen 2##NM_001130445|SSFA2|6744|sperm specific antigen 2##NM_006751|SSFA2|6744|sperm specific antigen 2##AB067514|SSFA2|6744|sperm specific antigen 2##BC009046|NEUROD1|4760|neurogenic differentiation 1##AB593068|NEUROD1|4760|neurogenic differentiation 1##AB593070|NEUROD1|4760|neurogenic differentiation 1##AB593071|NEUROD1|4760|neurogenic differentiation 1##AK313799|NEUROD1|4760|neurogenic differentiation 1##AB593069|NEUROD1|4760|neurogenic differentiation 1##D82347|NEUROD1|4760|neurogenic differentiation 1##HQ426678|CERKL|375298|ceramide kinase-like##JF290420|CERKL|375298|ceramide kinase-like##NM_002500|NEUROD1|4760|neurogenic differentiation 1##NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	0.77152	CTCF.p2:-14:0.772
chr3	75653845	75653997	reg1019303.p1	7.170	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	-169772	-	AB384611 BC150608 NM_020872	-1083619	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1979883	-	AK000525 NM_001124759	59562	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	67565	+	NM_001128223	180333	-	BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##NM_001128223|ZNF717|100131827|zinc finger protein 717	1.685867	CTCF.p2:-40:0.946	CTCF.p2:62:0.740
chr5	177888229	177888344	reg1018293.p2	7.170	+	TSC_hg19_v1_chr5_-_177659803 NM_153373	-228468	-	TSC_hg19_v1_chr5_-_177659788 BC039012 BC028002 BC067745 AK292061 BC037567 BC008009 BC088800 BC037238 BC110335	-228512	-	CU691508 TSC_hg19_v1_chr5_-_177659566 AK024076	-228704	-	AY158895 AY898961 NM_173465	129269	-	BC136261 BC143538 BC143547 TSC_hg19_v1_chr5_-_178054030 CR749504 BC065732 AK310427 BC063116 AK294921 BC015942 NM_020666 AK304614 AK311485	165743	-	TSC_hg19_v1_chr5_-_178054072 AK308879 AK309215 BC151233 AK308578	165794	-	NM_153373|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC039012|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC028002|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC067745|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AK292061|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC037567|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC008009|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC088800|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC037238|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC110335|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AK024076|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AY158895|COL23A1|91522|collagen, type XXIII, alpha 1##AY898961|COL23A1|91522|collagen, type XXIII, alpha 1##NM_173465|COL23A1|91522|collagen, type XXIII, alpha 1##BC136261|CLK4|57396|CDC-like kinase 4##BC143538|CLK4|57396|CDC-like kinase 4##BC143547|CLK4|57396|CDC-like kinase 4##CR749504|CLK4|57396|CDC-like kinase 4##BC065732|CLK4|57396|CDC-like kinase 4##AK310427|CLK4|57396|CDC-like kinase 4##BC063116|CLK4|57396|CDC-like kinase 4##BC015942|CLK4|57396|CDC-like kinase 4##NM_020666|CLK4|57396|CDC-like kinase 4##AK304614|CLK4|57396|CDC-like kinase 4##AK311485|CLK4|57396|CDC-like kinase 4##AK308879|CLK4|57396|CDC-like kinase 4##BC151233|CLK4|57396|CDC-like kinase 4	0.130857	
chr9	93796195	93796319	reg1019871.p2	7.170	+	NM_001174167 X73568	-206524	+	TSC_hg19_v1_chr9_+_93564206 NM_001174168 BC011399	-232042	+	TSC_hg19_v1_chr9_+_93564100 AK290927	-232142	+	TSC_hg19_v1_chr9_-_94124185 AB528075 AM393420 CU676666 DQ892036 DQ895227 X79888 AK302453	327913	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	327942	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	389787	-	NM_001174167|SYK|6850|spleen tyrosine kinase##X73568|SYK|6850|spleen tyrosine kinase##NM_001174168|SYK|6850|spleen tyrosine kinase##BC011399|SYK|6850|spleen tyrosine kinase##AK290927|SYK|6850|spleen tyrosine kinase##AM393420|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ892036|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ895227|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##X79888|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK302453|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated	0.214539	
chr7	101083788	101083897	reg1018449.p1	7.169	+	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	-77625	+	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	-118804	-	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-188276	-	BC002778 NM_138403	188733	-	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	375367	+	M74099 NM_181552	377039	+	NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1	0.993176	CTCF.p2:24:0.993
chr16	87358437	87358532	reg1016695.p1	7.168	+	TSC_hg19_v1_chr16_-_87350999 BC015536 AK026130 NM_001195124 NM_001195125	-7498	-	TSC_hg19_v1_chr16_-_87350760 AB528835 AM392822 AM393070	-7684	-	BC100027 NM_005250	-746370	+	TSC_hg19_v1_chr16_-_87417364 AY736035 AF428140 BC012748 BC002985 NM_024735	58878	-	TSC_hg19_v1_chr16_+_87425387 BC041874	66910	+	TSC_hg19_v1_chr16_+_87425818 NM_022818	67325	+	BC015536|C16orf95|100506581|chromosome 16 open reading frame 95##AK026130|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195124|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195125|C16orf95|100506581|chromosome 16 open reading frame 95##AM392822|C16orf95|100506581|chromosome 16 open reading frame 95##AM393070|C16orf95|100506581|chromosome 16 open reading frame 95##BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1##AY736035|FBXO31|79791|F-box protein 31##AF428140|FBXO31|79791|F-box protein 31##BC012748|FBXO31|79791|F-box protein 31##BC002985|FBXO31|79791|F-box protein 31##NM_024735|FBXO31|79791|F-box protein 31##BC041874|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##NM_022818|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta	0.846434	CTCF.p2:-11:0.846
chr1	223297161	223297313	reg1019671.p2	7.167	+	TSC_hg19_v1_chr1_+_222988422 NM_032890	-308846	+	AK125494 NM_207468	-386680	+	TSC_hg19_v1_chr1_+_222886732 AK315930 AK293974	-410504	+	TSC_hg19_v1_chr1_-_223316591 NM_003268	19369	-	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	240234	-	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	269528	+	NM_032890|DISP1|84976|dispatched homolog 1 (Drosophila)##AK125494|FAM177B|400823|family with sequence similarity 177, member B##NM_207468|FAM177B|400823|family with sequence similarity 177, member B##AK315930|BROX|148362|BRO1 domain and CAAX motif containing##AK293974|BROX|148362|BRO1 domain and CAAX motif containing##NM_003268|TLR5|7100|toll-like receptor 5##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4##NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65	1.214037	CTCF.p2:0:0.995	CTCF.p2:48:0.219
chr19	18580527	18580634	reg1019949.p1	7.167	+	AK296022 TSC_hg19_v1_chr19_-_18548975 AK092179 AX747394 NM_001170938 NM_016368	-31540	-	CU676344 DQ893465 DQ896336 AK001325 TSC_hg19_v1_chr19_-_18548942 AK093461 NM_001170939 AF207640 BC018952 AF086921 BC017189 BC066902 AF220530 AK021526	-31704	-	AL137749 NM_001253389	-32462	-	AB208794 TSC_hg19_v1_chr19_-_18632875 AK293105 AK225481 U16282	52286	-	TSC_hg19_v1_chr19_-_18632948 BC049195 NM_006532	52347	-	TSC_hg19_v1_chr19_-_18653874 AK300571	73197	-	AK296022|ISYNA1|51477|inositol-3-phosphate synthase 1##AK092179|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001170938|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_016368|ISYNA1|51477|inositol-3-phosphate synthase 1##DQ893465|ISYNA1|51477|inositol-3-phosphate synthase 1##DQ896336|ISYNA1|51477|inositol-3-phosphate synthase 1##AK001325|ISYNA1|51477|inositol-3-phosphate synthase 1##AK093461|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001170939|ISYNA1|51477|inositol-3-phosphate synthase 1##AF207640|ISYNA1|51477|inositol-3-phosphate synthase 1##BC018952|ISYNA1|51477|inositol-3-phosphate synthase 1##AF086921|ISYNA1|51477|inositol-3-phosphate synthase 1##BC066902|ISYNA1|51477|inositol-3-phosphate synthase 1##AF220530|ISYNA1|51477|inositol-3-phosphate synthase 1##AK021526|ISYNA1|51477|inositol-3-phosphate synthase 1##AL137749|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001253389|ISYNA1|51477|inositol-3-phosphate synthase 1##AB208794|ELL|8178|elongation factor RNA polymerase II##AK293105|ELL|8178|elongation factor RNA polymerase II##AK225481|ELL|8178|elongation factor RNA polymerase II##U16282|ELL|8178|elongation factor RNA polymerase II##BC049195|ELL|8178|elongation factor RNA polymerase II##NM_006532|ELL|8178|elongation factor RNA polymerase II##AK300571|FKBP8|23770|FK506 binding protein 8, 38kDa	0.998832	CTCF.p2:-5:0.999
chr8	81910762	81910942	reg1001303.p2	7.167	+	AK131274 NM_001033723	-123837	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-512368	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-827082	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	113462	-	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	281921	+	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	448817	-	AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2	0.0	
chr11	66743469	66743635	reg1018878.p2	7.165	+	AK026328 NM_001136485	-802	+	TSC_hg19_v1_chr11_-_66725855 BC011617 AK297705 NM_000920 NM_001040716	-17704	-	U30891 NM_022172 TSC_hg19_v1_chr11_-_66675385 S72370 U30890	-68172	-	AK315810 NM_001177880	46637	+	NM_177963 AK289672 AK289727 BC037406	47300	+	TSC_hg19_v1_chr11_+_66824285 NM_014578	80734	+	AK026328|C11orf86|254439|chromosome 11 open reading frame 86##NM_001136485|C11orf86|254439|chromosome 11 open reading frame 86##BC011617|PC|5091|pyruvate carboxylase##AK297705|PC|5091|pyruvate carboxylase##NM_000920|PC|5091|pyruvate carboxylase##NM_001040716|PC|5091|pyruvate carboxylase##U30891|PC|5091|pyruvate carboxylase##NM_022172|PC|5091|pyruvate carboxylase##S72370|PC|5091|pyruvate carboxylase##U30890|PC|5091|pyruvate carboxylase##AK315810|SYT12|91683|synaptotagmin XII##NM_001177880|SYT12|91683|synaptotagmin XII##NM_177963|SYT12|91683|synaptotagmin XII##AK289672|SYT12|91683|synaptotagmin XII##AK289727|SYT12|91683|synaptotagmin XII##BC037406|SYT12|91683|synaptotagmin XII##NM_014578|RHOD|29984|ras homolog gene family, member D	0.65694	CTCF.p2:23:0.657
chr16	22311933	22312041	reg1019748.p2	7.165	+	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	-3239	+	TSC_hg19_v1_chr16_+_22217630 NM_013302 AK308757 BC032665	-94314	+	AK098260 AK128606 AK307544 NM_173615	-208126	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	73808	-	NM_001135865 BC036263 AK296338 CU690320	212995	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	513515	+	AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase##BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK098260|VWA3A|146177|von Willebrand factor A domain containing 3A##AK128606|VWA3A|146177|von Willebrand factor A domain containing 3A##AK307544|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_173615|VWA3A|146177|von Willebrand factor A domain containing 3A##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001135865|LOC100132247|100132247|nuclear pore complex interacting protein related gene##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296338|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2	0.0	
chr10	76857839	76857942	reg1019541.p1	7.164	+	AY686755 NM_001003892 BC137321 BC137322	-39585	-	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-271536	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-921303	+	AB027004 AB103375 NM_016364	1357	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	11024	-	TSC_hg19_v1_chr10_+_76871413 BC080593 NM_001174156 NM_144660 AK057811	13527	+	AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13##BC080593|SAMD8|142891|sterile alpha motif domain containing 8##NM_001174156|SAMD8|142891|sterile alpha motif domain containing 8##NM_144660|SAMD8|142891|sterile alpha motif domain containing 8##AK057811|SAMD8|142891|sterile alpha motif domain containing 8	0.694557	CTCF.p2:-4:0.695
chr16	75655149	75655267	reg1019087.p2	7.164	+	AK289788 TSC_hg19_v1_chr16_+_75600276 AF087848 AK311266 AF077046 AJ010569 BC014594 BC005985 AB463663 AM393324 DQ893101 DQ896373 CR542217	-54878	+	AB030710 NM_007285 TSC_hg19_v1_chr16_+_75600274 BC029601	-54947	+	CU679755 TSC_hg19_v1_chr16_-_75590137 AK096650 NM_001077416 BC010609 AK307263 AK025820 BC063677 AY358612 AK290483 NM_001077418 NM_001077419	-65042	-	AK001687 AK314652 TSC_hg19_v1_chr16_-_75657163 BC002758 AK296834 NM_012091	1978	-	BC013246 CU678582 DQ892301 DQ895500 TSC_hg19_v1_chr16_-_75681564 BC004132 D31890 AF285758 AK126584 D32053 AK315687 NM_001130089 NM_005548	26353	-	AK307901 NM_018975 TSC_hg19_v1_chr16_+_75681715 AK000669 BC022428 BC004465 BC005841 BC016739 BC078171 AF289599 AF250393 AB464292 CU678732 AF262988	26499	+	AK289788|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AF087848|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AK311266|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AF077046|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AJ010569|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC014594|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC005985|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AM393324|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##DQ893101|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##DQ896373|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##CR542217|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AB030710|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##NM_007285|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC029601|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AK096650|TMEM231|79583|transmembrane protein 231##NM_001077416|TMEM231|79583|transmembrane protein 231##BC010609|TMEM231|79583|transmembrane protein 231##AK307263|TMEM231|79583|transmembrane protein 231##AK025820|TMEM231|79583|transmembrane protein 231##BC063677|TMEM231|79583|transmembrane protein 231##AY358612|TMEM231|79583|transmembrane protein 231##AK290483|TMEM231|79583|transmembrane protein 231##NM_001077418|TMEM231|79583|transmembrane protein 231##NM_001077419|TMEM231|79583|transmembrane protein 231##AK001687|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AK314652|ADAT1|23536|adenosine deaminase, tRNA-specific 1##BC002758|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AK296834|ADAT1|23536|adenosine deaminase, tRNA-specific 1##NM_012091|ADAT1|23536|adenosine deaminase, tRNA-specific 1##BC013246|KARS|3735|lysyl-tRNA synthetase##DQ892301|KARS|3735|lysyl-tRNA synthetase##DQ895500|KARS|3735|lysyl-tRNA synthetase##BC004132|KARS|3735|lysyl-tRNA synthetase##D31890|KARS|3735|lysyl-tRNA synthetase##AF285758|KARS|3735|lysyl-tRNA synthetase##AK126584|KARS|3735|lysyl-tRNA synthetase##D32053|KARS|3735|lysyl-tRNA synthetase##AK315687|KARS|3735|lysyl-tRNA synthetase##NM_001130089|KARS|3735|lysyl-tRNA synthetase##NM_005548|KARS|3735|lysyl-tRNA synthetase##AK307901|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##NM_018975|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AK000669|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC022428|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC004465|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC005841|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC016739|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC078171|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF289599|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF250393|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF262988|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein	0.025476	
chr20	49836871	49836996	reg1022459.p1	7.164	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	-197276	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-261565	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-261870	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	322206	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	322342	-	EU887574 EU887577 NM_001136021	342234	-	BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.927015	CTCF.p2:-4:0.927
chr5	17203598	17203716	reg1016141.p1	7.164	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-267272	-	BC050682 BC041694 TSC_hg19_v1_chr5_-_16936357 BC108736 BC032669	-267329	-	AK316138 TSC_hg19_v1_chr5_-_16742338	-461320	-	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	13955	+	TSC_hg19_v1_chr5_+_17217804 AF039656	14183	+	AK295087 BC031051 NM_001167667 NM_004934	2784665	-	AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##BC050682|MYO10|4651|myosin X##BC041694|MYO10|4651|myosin X##BC108736|MYO10|4651|myosin X##BC032669|MYO10|4651|myosin X##AK316138|MYO10|4651|myosin X##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2	0.988039	CTCF.p2:-18:0.988
chr10	78925634	78925753	reg1020010.p2	7.163	+	AF267860 NM_032024	-1383175	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1764128	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1764212	-	AF118141 TSC_hg19_v1_chr10_-_79397246	471532	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	471643	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	471713	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.972466	CTCF.p2:-11:0.972
chr17	34309220	34309320	reg1018616.p1	7.163	+	AB527929 U91746 AF055467 BC096352 BC099662 BC099663 BC099664 AF039955 NM_004590 AB007454 AK309593	-777	-	BC054481 NM_001199951	-38584	-	CU691088 AY742214 AY359018 NM_020426	-42811	-	AB527896 HQ257907 BC038289 BC050647 Z49270 BC045165 NM_032962 NM_032963 TSC_hg19_v1_chr17_-_34313766 AX772826	4469	-	AB463484 AF031587 Z70292 Z70293 TSC_hg19_v1_chr17_-_34328592 U58914	19291	-	TSC_hg19_v1_chr17_-_34328607 BC140941	19363	-	U91746|CCL16|6360|chemokine (C-C motif) ligand 16##AF055467|CCL16|6360|chemokine (C-C motif) ligand 16##BC096352|CCL16|6360|chemokine (C-C motif) ligand 16##BC099662|CCL16|6360|chemokine (C-C motif) ligand 16##BC099663|CCL16|6360|chemokine (C-C motif) ligand 16##BC099664|CCL16|6360|chemokine (C-C motif) ligand 16##AF039955|CCL16|6360|chemokine (C-C motif) ligand 16##NM_004590|CCL16|6360|chemokine (C-C motif) ligand 16##AB007454|CCL16|6360|chemokine (C-C motif) ligand 16##BC054481|LYZL6|57151|lysozyme-like 6##NM_001199951|LYZL6|57151|lysozyme-like 6##AY742214|LYZL6|57151|lysozyme-like 6##AY359018|LYZL6|57151|lysozyme-like 6##NM_020426|LYZL6|57151|lysozyme-like 6##HQ257907|CCL14|6358|chemokine (C-C motif) ligand 14##BC038289|CCL14|6358|chemokine (C-C motif) ligand 14##BC050647|CCL14|6358|chemokine (C-C motif) ligand 14##Z49270|CCL14|6358|chemokine (C-C motif) ligand 14##BC045165|CCL14|6358|chemokine (C-C motif) ligand 14##NM_032962|CCL14|6358|chemokine (C-C motif) ligand 14##NM_032963|CCL14|6358|chemokine (C-C motif) ligand 14##AF031587|CCL15|6359|chemokine (C-C motif) ligand 15##Z70292|CCL14-CCL15|348249|CCL14-CCL15 readthrough##Z70293|CCL14-CCL15|348249|CCL14-CCL15 readthrough##U58914|CCL15|6359|chemokine (C-C motif) ligand 15##BC140941|CCL14-CCL15|348249|CCL14-CCL15 readthrough	0.06251	
chr17	58252206	58252329	reg1019475.p1	7.163	+	TSC_hg19_v1_chr17_+_58227333 BC069649 M83670 BC074768 CR541766 CU691238	-24905	+	TSC_hg19_v1_chr17_+_58227302 BC057792 NM_000717 AK289715 AK298710	-24977	+	TSC_hg19_v1_chr17_-_58213006 AK311448	-39256	-	CU691084 TSC_hg19_v1_chr17_-_58469313 BC054344	217051	-	TSC_hg19_v1_chr17_-_58469447 AF533230	217191	-	TSC_hg19_v1_chr17_-_58469580 NM_032582 AK057301	217405	-	BC069649|CA4|762|carbonic anhydrase IV##M83670|CA4|762|carbonic anhydrase IV##BC074768|CA4|762|carbonic anhydrase IV##CR541766|CA4|762|carbonic anhydrase IV##BC057792|CA4|762|carbonic anhydrase IV##NM_000717|CA4|762|carbonic anhydrase IV##AK289715|CA4|762|carbonic anhydrase IV##AK298710|CA4|762|carbonic anhydrase IV##BC054344|USP32|84669|ubiquitin specific peptidase 32##AF533230|USP32|84669|ubiquitin specific peptidase 32##NM_032582|USP32|84669|ubiquitin specific peptidase 32##AK057301|USP32|84669|ubiquitin specific peptidase 32	0.500791	CTCF.p2:-5:0.488
chr3	134572012	134572160	reg1014345.p2	7.163	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-57785	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-57935	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-202241	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	1112445	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	1112534	+	NM_181897 AK316258 L12146	1169532	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.057126	
chr8	57101865	57102003	reg1021250.p1	7.163	+	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	-75394	-	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	-114848	-	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-309414	+	TSC_hg19_v1_chr8_-_57123833 U65002	21901	-	AK296933 AK313663 NM_001114634 NM_001114635 NM_002655 TSC_hg19_v1_chr8_-_57123860	21927	-	NM_001011667 NM_001011668 NM_001011669 NM_001011670 NM_001011671 NM_024300 TSC_hg19_v1_chr8_+_57124314	22380	+	BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1##AK296933|PLAG1|5324|pleiomorphic adenoma gene 1##AK313663|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001114634|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001114635|PLAG1|5324|pleiomorphic adenoma gene 1##NM_002655|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001011667|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011668|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011669|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011670|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011671|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_024300|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7	0.997718	CTCF.p2:1:0.998
chr1	11925677	11925806	reg1023913.p1	7.162	+	CR541976 CR542003 BC025785 M25296 NM_002521	-6801	-	AB528342 DQ893115 DQ896389 EU176780 M30262 TSC_hg19_v1_chr1_-_11907841 BC005893 NM_006172	-17950	-	TSC_hg19_v1_chr1_+_11866302 BC050457 HQ258635 X96391 X99473 X99474 X99475	-59416	+	TSC_hg19_v1_chr1_-_11986485 BC035033 AB095933 NM_138346	60732	-	TSC_hg19_v1_chr1_+_11994717 NM_000302	68981	+	TSC_hg19_v1_chr1_+_11994779 AK295254 AK294688 AK316285 AK312243 AK299150 M98252 BC016657 AB385110	69064	+	CR541976|NPPB|4879|natriuretic peptide B##CR542003|NPPB|4879|natriuretic peptide B##BC025785|NPPB|4879|natriuretic peptide B##M25296|NPPB|4879|natriuretic peptide B##NM_002521|NPPB|4879|natriuretic peptide B##DQ893115|NPPA|4878|natriuretic peptide A##DQ896389|NPPA|4878|natriuretic peptide A##EU176780|NPPA|4878|natriuretic peptide A##M30262|NPPA|4878|natriuretic peptide A##BC005893|NPPA|4878|natriuretic peptide A##NM_006172|NPPA|4878|natriuretic peptide A##BC050457|CLCN6|1185|chloride channel 6##HQ258635|CLCN6|1185|chloride channel 6##X96391|CLCN6|1185|chloride channel 6##X99473|CLCN6|1185|chloride channel 6##X99474|CLCN6|1185|chloride channel 6##X99475|CLCN6|1185|chloride channel 6##BC035033|KIAA2013|90231|KIAA2013##AB095933|KIAA2013|90231|KIAA2013##NM_138346|KIAA2013|90231|KIAA2013##NM_000302|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK295254|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK294688|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK316285|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK312243|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##AK299150|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##M98252|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1##BC016657|PLOD1|5351|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1	0.0	
chr1	209739526	209739644	reg1019542.p1	7.162	+	AK091113 AX746785 NM_001104548	-137420	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-1321936	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-1655028	-	NM_020439 AK095713 AK289675 AF428261 BC032787	17475	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	85094	-	L25541 NM_001127641 D37766 TSC_hg19_v1_chr1_-_209825771 AK296851 AK309524	86139	-	NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3##L25541|LAMB3|3914|laminin, beta 3##NM_001127641|LAMB3|3914|laminin, beta 3##D37766|LAMB3|3914|laminin, beta 3##AK296851|LAMB3|3914|laminin, beta 3##AK309524|LAMB3|3914|laminin, beta 3	0.994096	CTCF.p2:12:0.994
chr2	24307301	24307414	reg1018768.p1	7.162	+	TSC_hg19_v1_chr2_-_24307204 AB590633 AY371700 BT007149 NM_001206802	-162	-	BC029459 TSC_hg19_v1_chr2_+_24299760	-7545	+	TSC_hg19_v1_chr2_+_24299729 AK092423	-7649	+	TSC_hg19_v1_chr2_-_24307733 AK297579 BC000474 BC018819 AF010309 AK223382 NM_004881 NM_147184	484	-	TSC_hg19_v1_chr2_-_24346174 BC029523 NM_199346 BC043236 AK292601	38887	-	TSC_hg19_v1_chr2_+_24346339 NM_001145710	39002	+	AY371700|TP53I3|9540|tumor protein p53 inducible protein 3##BT007149|TP53I3|9540|tumor protein p53 inducible protein 3##NM_001206802|TP53I3|9540|tumor protein p53 inducible protein 3##BC029459|LOC375190|375190|UPF0638 protein B##AK297579|TP53I3|9540|tumor protein p53 inducible protein 3##BC000474|TP53I3|9540|tumor protein p53 inducible protein 3##BC018819|TP53I3|9540|tumor protein p53 inducible protein 3##AF010309|TP53I3|9540|tumor protein p53 inducible protein 3##AK223382|TP53I3|9540|tumor protein p53 inducible protein 3##NM_004881|TP53I3|9540|tumor protein p53 inducible protein 3##NM_147184|TP53I3|9540|tumor protein p53 inducible protein 3##BC029523|PFN4|375189|profilin family, member 4##NM_199346|PFN4|375189|profilin family, member 4##BC043236|PFN4|375189|profilin family, member 4##AK292601|PFN4|375189|profilin family, member 4##NM_001145710|LOC375190|375190|UPF0638 protein B	0.998313	CTCF.p2:-12:0.998
chr3	44364990	44365091	reg1018807.p1	7.162	+	AK093476 AX748152 NM_001145030	-81663	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-632619	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-701527	-	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	14590	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	14907	+	TSC_hg19_v1_chr3_+_44380009 BC038420	14973	+	AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23##BC038420|C3orf23|285343|chromosome 3 open reading frame 23	0.683982	CTCF.p2:-3:0.684
chr1	91744459	91744599	reg1018228.p2	7.161	+	BC150177 TSC_hg19_v1_chr1_-_91487794 NM_032186 NM_201269	-256739	-	TSC_hg19_v1_chr1_-_91487593 BC110841 BC132776 BC132778	-256894	-	TSC_hg19_v1_chr1_-_91487586 BC092462	-256940	-	TSC_hg19_v1_chr1_-_91870367 AB058637 AK294754 AK302582 AB058636 AB204867 NM_001017975	125843	-	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	221890	+	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	222152	+	BC150177|ZNF644|84146|zinc finger protein 644##NM_032186|ZNF644|84146|zinc finger protein 644##NM_201269|ZNF644|84146|zinc finger protein 644##BC110841|ZNF644|84146|zinc finger protein 644##BC132776|ZNF644|84146|zinc finger protein 644##BC132778|ZNF644|84146|zinc finger protein 644##BC092462|ZNF644|84146|zinc finger protein 644##AB058637|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK294754|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK302582|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB058636|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB204867|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001017975|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)	0.40822	CTCF.p2:-3:0.408
chr4	7721427	7721543	reg1018003.p1	7.161	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	-284829	-	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-527090	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-651684	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	219903	-	TSC_hg19_v1_chr4_-_8073714 AK094798	352231	-	TSC_hg19_v1_chr4_-_8129388 AK301060	407900	-	BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2	0.483068	CTCF.p2:0:0.483
chr6	38461752	38461854	reg1003676.p1	7.161	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	-674113	+	TSC_hg19_v1_chr6_+_37787274 NM_021943	-674513	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	-796097	-	BC101354 BC101355 BC101356 BC101357 AK057507 NM_001172418 NM_152733	101999	-	AB067467 TSC_hg19_v1_chr6_-_38607611	145802	-	TSC_hg19_v1_chr6_-_38607697 BX537534	145863	-	AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##BC101354|BTBD9|114781|BTB (POZ) domain containing 9##BC101355|BTBD9|114781|BTB (POZ) domain containing 9##BC101356|BTBD9|114781|BTB (POZ) domain containing 9##BC101357|BTBD9|114781|BTB (POZ) domain containing 9##AK057507|BTBD9|114781|BTB (POZ) domain containing 9##NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9##NM_152733|BTBD9|114781|BTB (POZ) domain containing 9##AB067467|BTBD9|114781|BTB (POZ) domain containing 9##BX537534|BTBD9|114781|BTB (POZ) domain containing 9	0.0	
chr8	61760149	61760249	reg1019232.p1	7.161	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-168797	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-168911	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-330449	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	440351	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	842147	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	866819	-	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase	0.439094	CTCF.p2:-1:0.439
chr19	49728249	49728343	reg1016248.p2	7.160	+	AK000048 TSC_hg19_v1_chr19_+_49669495	-58846	+	TSC_hg19_v1_chr19_+_49661048 AK074664 AF497623 AK292862 AY297044 AY297045 AY297046 AY046396 AJ575813 BC132727 BC144122 BC144123 AK295820	-67230	+	AK307897 NM_001195227 NM_017636 TSC_hg19_v1_chr19_+_49661029	-67283	+	BC034948 BC039336 NM_014037	100157	-	TSC_hg19_v1_chr19_+_49838662 AK301016	110362	+	TSC_hg19_v1_chr19_+_49838683 NM_001040031 NM_001774 AK301328	110382	+	AK000048|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AF497623|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK292862|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297044|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297045|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297046|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY046396|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AJ575813|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC132727|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144122|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144123|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK295820|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK307897|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_001195227|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##NM_017636|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC034948|SLC6A16|28968|solute carrier family 6, member 16##NM_014037|SLC6A16|28968|solute carrier family 6, member 16##AK301016|CD37|951|CD37 molecule##NM_001040031|CD37|951|CD37 molecule##NM_001774|CD37|951|CD37 molecule##AK301328|CD37|951|CD37 molecule	0.205093	CTCF.p2:11:0.205
chr3	111434930	111435039	reg1021924.p1	7.160	+	AK056141 NM_001185106 NM_153268 TSC_hg19_v1_chr3_+_111393527	-41459	+	NM_024508	-120803	-	AK290719 AK315237 TSC_hg19_v1_chr3_+_111261063 AL833681 CU676690	-173917	+	AK296841 NM_001134437 TSC_hg19_v1_chr3_+_111451348 CR749654 AK307491	16361	+	NM_001134438 NM_145753 AK096151 TSC_hg19_v1_chr3_+_111578114 AK315050	143087	+	TSC_hg19_v1_chr3_+_111578136 BC069194	143153	+	AK056141|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_001185106|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_153268|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_024508|ZBED2|79413|zinc finger, BED-type containing 2##AK290719|CD96|10225|CD96 molecule##AK315237|CD96|10225|CD96 molecule##AL833681|CD96|10225|CD96 molecule##AK296841|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001134437|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##CR749654|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK307491|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001134438|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_145753|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK096151|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK315050|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##BC069194|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	0.0	
chr3	125439227	125439366	reg1018091.p2	7.160	+	TSC_hg19_v1_chr3_-_125314371 NM_022776	-124923	-	TSC_hg19_v1_chr3_-_125239050 NM_003794	-200243	-	AF065485 TSC_hg19_v1_chr3_-_125239047 CU676320 DQ892131 DQ895325 AB528425 AK001835 AK298972 BC018762 BC021002	-200265	-	TSC_hg19_v1_chr3_+_125635451 BC032772 BC041080	196160	+	BC073816 NM_001015050 NM_001195223	216587	-	AF231410 NM_001012337 BC141849 AK302014	248758	+	NM_022776|OSBPL11|114885|oxysterol binding protein-like 11##NM_003794|SNX4|8723|sorting nexin 4##AF065485|SNX4|8723|sorting nexin 4##DQ892131|SNX4|8723|sorting nexin 4##DQ895325|SNX4|8723|sorting nexin 4##AK001835|SNX4|8723|sorting nexin 4##AK298972|SNX4|8723|sorting nexin 4##BC018762|SNX4|8723|sorting nexin 4##BC032772|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC041080|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like##AF231410|ROPN1B|152015|rhophilin associated tail protein 1B##NM_001012337|ROPN1B|152015|rhophilin associated tail protein 1B##BC141849|ROPN1B|152015|rhophilin associated tail protein 1B	1.115574	CTCF.p2:22:0.375	CTCF.p2:-80:0.740
chr3	64449367	64449478	reg1017419.p2	7.160	+	BC119002 AL833539 NM_198859	-238302	-	AF530062 AB463196 TSC_hg19_v1_chr3_-_64009149 BC000630 AK095059 AY568086 D14663 NM_014814 BC012369 BC000904 AK290205 BX647742 AF215935	-440272	-	NM_001128149 AK310745 AK304062	-495965	+	AK057923 TSC_hg19_v1_chr3_+_64670789 BC040632	221369	+	AB037733 TSC_hg19_v1_chr3_-_64672299	222873	-	TSC_hg19_v1_chr3_-_64673334 AF261918 BC130578 BC171764 AF488803 NM_182920	223925	-	BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)##NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_001128149|ATXN7|6314|ataxin 7##AK310745|ATXN7|6314|ataxin 7##AK304062|ATXN7|6314|ataxin 7##AK057923|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##BC040632|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	0.987228	CTCF.p2:-5:0.987
chr6	142528668	142528792	reg1019187.p2	7.160	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-18101	+	BC005937 TSC_hg19_v1_chr6_+_142468418 AF141341 AB464348 CR457207 CU692682 DQ893520 DQ896504 AJ420507	-60308	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	-60324	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	94339	+	TSC_hg19_v1_chr6_+_142623443 BX640873	94676	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	737598	-	BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC005937|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF141341|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR457207|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##DQ893520|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##DQ896504|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AJ420507|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BX640873|GPR126|57211|G protein-coupled receptor 126##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2	0.468712	CTCF.p2:11:0.469
chr6	163329037	163329156	reg1020558.p1	7.160	+	AF546872 NM_001080379 BC030642	-180080	+	TSC_hg19_v1_chr6_-_163148808 NM_004562 NM_013987 NM_013988	-180280	-	TSC_hg19_v1_chr6_-_163148799 AB009973	-180298	-	TSC_hg19_v1_chr6_+_163835675 AB067798 AB067799 AB067800 AB067801 NM_006775 NM_206853 NM_206854 NM_206855	506576	+	TSC_hg19_v1_chr6_+_163835795 AF272349	506694	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	507136	+	AF546872|PACRG|135138|PARK2 co-regulated##NM_001080379|PACRG|135138|PARK2 co-regulated##BC030642|PACRG|135138|PARK2 co-regulated##NM_004562|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##NM_013987|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##NM_013988|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB009973|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB067798|QKI|9444|QKI, KH domain containing, RNA binding##AB067799|QKI|9444|QKI, KH domain containing, RNA binding##AB067800|QKI|9444|QKI, KH domain containing, RNA binding##AB067801|QKI|9444|QKI, KH domain containing, RNA binding##NM_006775|QKI|9444|QKI, KH domain containing, RNA binding##NM_206853|QKI|9444|QKI, KH domain containing, RNA binding##NM_206854|QKI|9444|QKI, KH domain containing, RNA binding##NM_206855|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding	0.983685	CTCF.p2:20:0.984
chr6_mann_hap4	3725428	3725540	reg1019548.p1	7.160	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.101968	
chr1	115817980	115818090	reg1019151.p1	7.159	+	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	-185919	-	NM_000549	-245621	+	NM_003176 BC026162 AK315268 AF273043 BC105299 BC126266 BC144019 BC144020 BC065190 X95654	-420523	+	BC032517 NM_002506 X52599	62818	-	NM_001172411 NM_138959 BC065272 AF481859	366557	+	AB057596 NM_001172412	367214	+	AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##NM_000549|TSHB|7252|thyroid stimulating hormone, beta##NM_003176|SYCP1|6847|synaptonemal complex protein 1##BC026162|SYCP1|6847|synaptonemal complex protein 1##AK315268|SYCP1|6847|synaptonemal complex protein 1##AF273043|SYCP1|6847|synaptonemal complex protein 1##BC105299|SYCP1|6847|synaptonemal complex protein 1##BC126266|SYCP1|6847|synaptonemal complex protein 1##BC144019|SYCP1|6847|synaptonemal complex protein 1##BC144020|SYCP1|6847|synaptonemal complex protein 1##BC065190|SYCP1|6847|synaptonemal complex protein 1##X95654|SYCP1|6847|synaptonemal complex protein 1##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)	0.848345	CTCF.p2:-12:0.848
chr11	36586172	36586338	reg1002355.p2	7.159	+	TSC_hg19_v1_chr11_-_36531820 U78798 BC031052 AK292978 NM_004620 NM_145803	-54441	-	NM_001160169	-163709	+	NM_001160168 NM_024841 BX640959 AK024275	-188695	+	NM_000448 M29474	3313	+	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	29849	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	33547	-	U78798|TRAF6|7189|TNF receptor-associated factor 6##BC031052|TRAF6|7189|TNF receptor-associated factor 6##AK292978|TRAF6|7189|TNF receptor-associated factor 6##NM_004620|TRAF6|7189|TNF receptor-associated factor 6##NM_145803|TRAF6|7189|TNF receptor-associated factor 6##NM_001160169|PRR5L|79899|proline rich 5 like##NM_001160168|PRR5L|79899|proline rich 5 like##NM_024841|PRR5L|79899|proline rich 5 like##BX640959|PRR5L|79899|proline rich 5 like##AK024275|PRR5L|79899|proline rich 5 like##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2	0.0	
chr6	132244635	132244761	reg1022110.p1	7.159	+	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-115437	+	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	-115537	+	NM_001145659	-212542	-	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	27716	-	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	477918	-	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	589552	-	BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_001145659|CTAGE9|643854|CTAGE family, member 9##BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7	0.96808	CTCF.p2:1:0.968
chr1	219491219	219491356	reg1019115.p1	7.158	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-144045	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-144129	+	M19154 TSC_hg19_v1_chr1_+_218519634	-971682	+	BC036078 TSC_hg19_v1_chr1_-_220101540	610242	-	AB464233 TSC_hg19_v1_chr1_-_220101784	610504	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	610678	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.0	
chr5	87437429	87437514	reg1017561.p1	7.158	+	TSC_hg19_v1_chr5_-_86708756 NM_001239	-728669	-	CU675079 CU677687 CU692576 AB590163 CR407658 DQ892550 DQ895761 U12685 TSC_hg19_v1_chr5_-_86708717 U11791 BC022351 BC016823 BC016705 AK291720 BC005280 BX537673 NM_001199189	-728806	-	TSC_hg19_v1_chr5_-_86703928 AK094534	-733510	-	BX647345 AK299896 AK300893 AK301091 AY358693 BC037287 NM_153354 AK294520	127173	-	TSC_hg19_v1_chr5_+_87564773 BC030122	127285	+	BC047059 TSC_hg19_v1_chr5_+_87564842	127378	+	NM_001239|CCNH|902|cyclin H##CR407658|CCNH|902|cyclin H##DQ892550|CCNH|902|cyclin H##DQ895761|CCNH|902|cyclin H##U12685|CCNH|902|cyclin H##U11791|CCNH|902|cyclin H##BC022351|CCNH|902|cyclin H##BC016823|CCNH|902|cyclin H##BC016705|CCNH|902|cyclin H##AK291720|CCNH|902|cyclin H##BC005280|CCNH|902|cyclin H##BX537673|CCNH|902|cyclin H##NM_001199189|CCNH|902|cyclin H##AK094534|CCNH|902|cyclin H##BX647345|TMEM161B|153396|transmembrane protein 161B##AK299896|TMEM161B|153396|transmembrane protein 161B##AK300893|TMEM161B|153396|transmembrane protein 161B##AK301091|TMEM161B|153396|transmembrane protein 161B##AY358693|TMEM161B|153396|transmembrane protein 161B##BC037287|TMEM161B|153396|transmembrane protein 161B##NM_153354|TMEM161B|153396|transmembrane protein 161B##BC030122|LOC100505894|100505894|uncharacterized LOC100505894##BC047059|LOC100505894|100505894|uncharacterized LOC100505894	0.945728	CTCF.p2:25:0.946
chr9	98489193	98489295	reg1016932.p2	7.158	+	AB189436 AB189437 NM_001083602 NM_001083603 BC043542	-209952	-	AB212827 AB212828 AB239329 TSC_hg19_v1_chr9_-_98279070	-210240	-	NM_000264 TSC_hg19_v1_chr9_-_98270933	-218360	-	TSC_hg19_v1_chr9_-_98637744 AF170307	148508	-	TSC_hg19_v1_chr9_-_98637839 AK092137 AX747374	148609	-	NM_001010895 TSC_hg19_v1_chr9_+_98637942 AK129624 AK308409 AL389953	148697	+	AB189436|PTCH1|5727|patched 1##AB189437|PTCH1|5727|patched 1##NM_001083602|PTCH1|5727|patched 1##NM_001083603|PTCH1|5727|patched 1##BC043542|PTCH1|5727|patched 1##AB212827|PTCH1|5727|patched 1##AB212828|PTCH1|5727|patched 1##AB239329|PTCH1|5727|patched 1##NM_000264|PTCH1|5727|patched 1##AF170307|LINC00476|100128782|long intergenic non-protein coding RNA 476##AK092137|LINC00476|100128782|long intergenic non-protein coding RNA 476##NM_001010895|C9orf102|375748|chromosome 9 open reading frame 102##AK308409|C9orf102|375748|chromosome 9 open reading frame 102##AL389953|C9orf102|375748|chromosome 9 open reading frame 102	0.992692	CTCF.p2:-7:0.993
chr13	59535175	59535301	reg1020045.p1	7.157	+	TSC_hg19_v1_chr13_+_58207858 AK307545	-1327342	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	-1329291	+	NM_001040429	-1329450	+	BC041395 TSC_hg19_v1_chr13_-_60325215	789906	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	1052082	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	1202743	-	AK307545|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##NM_001040429|PCDH17|27253|protocadherin 17##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	0.968813	CTCF.p2:3:0.969
chr15	39605329	39605432	reg1019996.p1	7.157	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	-62455	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-616582	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-748449	-	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	267949	+	AK093308 AX748045 BC045191 NM_152597	469648	-	AK091251 TSC_hg19_v1_chr15_+_40075106	469726	+	BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.6293	CTCF.p2:-22:0.629
chr10	112967425	112967557	reg1022788.p1	7.156	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	-130639	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-288111	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-288131	+	AB046780 TSC_hg19_v1_chr10_-_113933602	966070	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	976014	-	BC113497 BC113499 AF312827 HQ258194 NM_058222	1075961	+	NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta	0.979046	CTCF.p2:2:0.979
chr10	114480954	114481091	reg1023027.p1	7.156	+	TSC_hg19_v1_chr10_-_114207307 AK308026	-273717	-	TSC_hg19_v1_chr10_+_114206991 BC017052 AK303646	-274011	+	TSC_hg19_v1_chr10_+_114206756 AK095476 NM_145206 BC064614	-274258	+	TSC_hg19_v1_chr10_+_114710005 AK225809 NM_001146274 NM_001146283 NM_001146284 NM_001146285 NM_001146286 NM_001198525 NM_001198526 NM_001198527 NM_001198528 NM_001198529 NM_001198530 NM_001198531 NM_030756 FJ010174 Y11306 AK315243 FJ010168 FJ010169 FJ010172 FJ010166 FJ010167 FJ010170 BC032656 FJ010171 AK299295 AB440195 AB451266 CR536574 HM352838 HM352839 HM352840 HM352841 HM352842 HM352843 HM352844 HM352845 HM352846 HM352847 HM352848 HM352849 HM352850 HM352851 BX648364	229280	+	TSC_hg19_v1_chr10_+_114710785 FJ010164 FJ010165 FJ010173	229811	+	AK303948 NM_001177660	829567	+	AK308026|ZDHHC6|64429|zinc finger, DHHC-type containing 6##BC017052|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##AK303646|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##NM_145206|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010164|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010165|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010173|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK303948|HABP2|3026|hyaluronan binding protein 2##NM_001177660|HABP2|3026|hyaluronan binding protein 2	0.116483	
chr11	4647537	4647718	reg1020572.p1	7.156	+	AK301120 TSC_hg19_v1_chr11_-_4629404 AK310888 AK291166 BC109063 AF360739 AL832730 AK056523 NM_018073	-18193	-	AB463977 NM_001005169	-32359	+	BC136921 BC151144 NM_001005170	-39607	+	BC140717 NM_001004751	13317	+	BC022401 NM_152430 AL833127 AY698056	17556	+	BC020768 AY033942 AK314051 NM_030774	71384	-	AK301120|TRIM68|55128|tripartite motif containing 68##AK310888|TRIM68|55128|tripartite motif containing 68##AK291166|TRIM68|55128|tripartite motif containing 68##BC109063|TRIM68|55128|tripartite motif containing 68##AF360739|TRIM68|55128|tripartite motif containing 68##AL832730|TRIM68|55128|tripartite motif containing 68##AK056523|TRIM68|55128|tripartite motif containing 68##NM_018073|TRIM68|55128|tripartite motif containing 68##NM_001005169|OR52I1|390037|olfactory receptor, family 52, subfamily I, member 1##BC136921|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##BC151144|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##NM_001005170|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##BC140717|OR51D1|390038|olfactory receptor, family 51, subfamily D, member 1##NM_001004751|OR51D1|390038|olfactory receptor, family 51, subfamily D, member 1##BC022401|OR51E1|143503|olfactory receptor, family 51, subfamily E, member 1##NM_152430|OR51E1|143503|olfactory receptor, family 51, subfamily E, member 1##AL833127|OR51E1|143503|olfactory receptor, family 51, subfamily E, member 1##AY698056|OR51E1|143503|olfactory receptor, family 51, subfamily E, member 1##BC020768|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2##AY033942|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2##AK314051|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2##NM_030774|OR51E2|81285|olfactory receptor, family 51, subfamily E, member 2	0.999071	CTCF.p2:-7:0.999
chr13	111567595	111567699	reg1016409.p1	7.156	+	AK000100 NM_017664 TSC_hg19_v1_chr13_-_111567417	-231	-	TSC_hg19_v1_chr13_-_111567375 BC001727 AK096083 BC039715	-282	-	CU674848 CU691752 TSC_hg19_v1_chr13_-_111567293	-360	-	TSC_hg19_v1_chr13_+_111767658 BC060776 NM_001113511 NM_001113512 NM_145735 BC033905 AL834228 CU687414 CU689800 EU832819 GQ129214	200082	+	AK300157 TSC_hg19_v1_chr13_+_111806035	238389	+	TSC_hg19_v1_chr13_+_111806041 AB177849 NM_003899	238404	+	AK000100|ANKRD10|55608|ankyrin repeat domain 10##NM_017664|ANKRD10|55608|ankyrin repeat domain 10##BC001727|ANKRD10|55608|ankyrin repeat domain 10##AK096083|ANKRD10|55608|ankyrin repeat domain 10##BC039715|ANKRD10|55608|ankyrin repeat domain 10##BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK300157|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AB177849|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_003899|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	0.95523	CTCF.p2:-22:0.955
chr14	64626398	64626577	reg1018812.p1	7.156	+	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	-306792	+	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	-431738	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	-517925	-	NM_182913 AY061758 AK297874	54390	+	NM_182910	56184	+	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	123176	-	NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)	0.16853	
chr2	241673385	241673478	reg1017327.p2	7.156	+	AB040748 BC041460 NM_198998	-42170	+	BC157895 BC171912 BC139748 NM_001102467 BC041460	-51116	-	AK314002 NM_005301	-108770	+	BC064906 TSC_hg19_v1_chr2_-_241759637 AK307119 AB621817 AB210029 AB290172 NM_001244008 NM_004321	86244	-	NM_000030 X53414 BC132819 D13368 S71388 AK315331 TSC_hg19_v1_chr2_+_241808251 AK292754 AK298420 AB292648 X56092 AF348451 AK298400 AK316495	134837	+	BC125154 BC125155 AK026324 NM_024861 AK096434	157988	-	AB040748|AQP12A|375318|aquaporin 12A##BC041460|AQP12B|653437|aquaporin 12B##NM_198998|AQP12A|375318|aquaporin 12A##BC157895|AQP12B|653437|aquaporin 12B##BC171912|AQP12B|653437|aquaporin 12B##BC139748|AQP12B|653437|aquaporin 12B##NM_001102467|AQP12B|653437|aquaporin 12B##BC041460|AQP12B|653437|aquaporin 12B##AK314002|GPR35|2859|G protein-coupled receptor 35##NM_005301|GPR35|2859|G protein-coupled receptor 35##BC064906|KIF1A|547|kinesin family member 1A##AK307119|KIF1A|547|kinesin family member 1A##AB210029|KIF1A|547|kinesin family member 1A##AB290172|KIF1A|547|kinesin family member 1A##NM_001244008|KIF1A|547|kinesin family member 1A##NM_004321|KIF1A|547|kinesin family member 1A##NM_000030|AGXT|189|alanine-glyoxylate aminotransferase##X53414|AGXT|189|alanine-glyoxylate aminotransferase##BC132819|AGXT|189|alanine-glyoxylate aminotransferase##D13368|AGXT|189|alanine-glyoxylate aminotransferase##AK315331|AGXT|189|alanine-glyoxylate aminotransferase##AK292754|AGXT|189|alanine-glyoxylate aminotransferase##AK298420|AGXT|189|alanine-glyoxylate aminotransferase##AB292648|AGXT|189|alanine-glyoxylate aminotransferase##X56092|AGXT|189|alanine-glyoxylate aminotransferase##AF348451|AGXT|189|alanine-glyoxylate aminotransferase##AK298400|AGXT|189|alanine-glyoxylate aminotransferase##AK316495|AGXT|189|alanine-glyoxylate aminotransferase##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54	0.393545	CTCF.p2:11:0.394
chr7	5867563	5867659	reg1018403.p1	7.156	+	TSC_hg19_v1_chr7_+_5862862 AX721099	-4745	+	TSC_hg19_v1_chr7_+_5862791 AK291169 AK096288	-4826	+	BC004947 TSC_hg19_v1_chr7_-_5821284 AK297231 BC063825 AK092767 AX747717 AK297416 BX537406 NM_207111 NM_207116 AK292396	-46302	-	BC147028 BC147029 BC113704 BC113706 NM_001097622 CU686830 BC069468 BC069512 BC069550 HQ258718	52862	+	BC067810 NM_015622 BC132749 BC132751 AK292326 BC010130 CU679629	70769	+	AK314983 BC034495 NM_001099697 NM_173565	142702	-	AK291169|ZNF815|401303|zinc finger protein 815##AK096288|ZNF815|401303|zinc finger protein 815##BC004947|RNF216|54476|ring finger protein 216##AK297231|RNF216|54476|ring finger protein 216##BC063825|RNF216|54476|ring finger protein 216##AK092767|RNF216|54476|ring finger protein 216##AK297416|RNF216|54476|ring finger protein 216##BX537406|RNF216|54476|ring finger protein 216##NM_207111|RNF216|54476|ring finger protein 216##NM_207116|RNF216|54476|ring finger protein 216##AK292396|RNF216|54476|ring finger protein 216##BC147028|OCM|654231|oncomodulin##BC147029|OCM|654231|oncomodulin##BC113704|OCM|654231|oncomodulin##BC113706|OCM|654231|oncomodulin##NM_001097622|OCM|654231|oncomodulin##BC069468|OCM|654231|oncomodulin##BC069512|OCM|654231|oncomodulin##BC069550|OCM|654231|oncomodulin##HQ258718|OCM|654231|oncomodulin##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_015622|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)	0.987073	CTCF.p2:-19:0.987
chr10	126394508	126394619	reg1019214.p1	7.155	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-244142	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-255986	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-287045	-	D50930 TSC_hg19_v1_chr10_-_126432660	38081	-	TSC_hg19_v1_chr10_-_126432823 BC031654	38253	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	38348	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.0	
chr13	80350061	80350162	reg1018560.p1	7.155	+	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-294556	+	TSC_hg19_v1_chr13_+_80055411 AK297197 AK001723	-294689	+	TSC_hg19_v1_chr13_+_80055257 NM_001161407 NM_019080 AB097019 AB097028 AB097029	-294840	+	BC004205 TSC_hg19_v1_chr13_-_80913114	562931	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	564953	-	TSC_hg19_v1_chr13_-_84456424 BC051738	4106314	-	AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##AK297197|NDFIP2|54602|Nedd4 family interacting protein 2##AK001723|NDFIP2|54602|Nedd4 family interacting protein 2##NM_001161407|NDFIP2|54602|Nedd4 family interacting protein 2##NM_019080|NDFIP2|54602|Nedd4 family interacting protein 2##AB097019|NDFIP2|54602|Nedd4 family interacting protein 2##AB097028|NDFIP2|54602|Nedd4 family interacting protein 2##AB097029|NDFIP2|54602|Nedd4 family interacting protein 2##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1	0.777529	CTCF.p2:-1:0.778
chr18	52346938	52347078	reg1022256.p1	7.155	+	AK096425 NM_173629	-88619	+	BX640877 NM_173529	-461838	+	AB528241 AF480305 NM_139171	-466066	-	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	148730	+	AK058097 NM_001143829	278270	-	AF273051 TSC_hg19_v1_chr18_-_52626693 BC029508 NM_025214	279679	-	AK096425|C18orf26|284254|chromosome 18 open reading frame 26##NM_173629|C18orf26|284254|chromosome 18 open reading frame 26##BX640877|C18orf54|162681|chromosome 18 open reading frame 54##NM_173529|C18orf54|162681|chromosome 18 open reading frame 54##AF480305|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_139171|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family##AK058097|CCDC68|80323|coiled-coil domain containing 68##NM_001143829|CCDC68|80323|coiled-coil domain containing 68##AF273051|CCDC68|80323|coiled-coil domain containing 68##BC029508|CCDC68|80323|coiled-coil domain containing 68##NM_025214|CCDC68|80323|coiled-coil domain containing 68	0.101306	
chr2	120867487	120867611	reg1021701.p1	7.154	+	TSC_hg19_v1_chr2_+_120770652 AK023019 BC054508 AK290895 BC032822 NM_001184938	-96816	+	TSC_hg19_v1_chr2_+_120770604 NM_001184937 NM_001184939 NM_020909	-96946	+	M68941 NM_002830 TSC_hg19_v1_chr2_+_120517497 AK314836 BC010674	-350149	+	TSC_hg19_v1_chr2_-_120980957 BC016849 AK289880 BC080607 AK024632	113388	-	TSC_hg19_v1_chr2_-_120980977 AF530474 NM_024121	113449	-	NM_002881 TSC_hg19_v1_chr2_+_121010418	142871	+	AK023019|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC054508|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK290895|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC032822|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184938|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184937|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184939|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_020909|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC016849|TMEM185B|79134|transmembrane protein 185B##BC080607|TMEM185B|79134|transmembrane protein 185B##AK024632|TMEM185B|79134|transmembrane protein 185B##AF530474|TMEM185B|79134|transmembrane protein 185B##NM_024121|TMEM185B|79134|transmembrane protein 185B##NM_002881|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)	0.999725	CTCF.p2:-4:1.000
chr12	67613993	67614124	reg1019216.p1	7.153	+	TSC_hg19_v1_chr12_-_67072881 AK095519 NM_001178074 NM_021150	-541156	-	BC115393 BC115394 TSC_hg19_v1_chr12_-_67072757 AK307576	-541302	-	TSC_hg19_v1_chr12_+_66696305 NM_033647 BC143409 BC143411 AK290894 AK024464 AB527324 AF319995	-917729	+	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	49044	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	49114	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	49372	+	AK095519|GRIP1|23426|glutamate receptor interacting protein 1##NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1##NM_021150|GRIP1|23426|glutamate receptor interacting protein 1##BC115393|GRIP1|23426|glutamate receptor interacting protein 1##BC115394|GRIP1|23426|glutamate receptor interacting protein 1##AK307576|GRIP1|23426|glutamate receptor interacting protein 1##NM_033647|HELB|92797|helicase (DNA) B##BC143409|HELB|92797|helicase (DNA) B##BC143411|HELB|92797|helicase (DNA) B##AK290894|HELB|92797|helicase (DNA) B##AF319995|HELB|92797|helicase (DNA) B##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1	0.02145	
chr15	39886301	39886412	reg1012755.p1	7.153	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	-13027	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	-343431	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-897558	+	AK093308 AX748045 BC045191 NM_152597	188672	-	AK091251 TSC_hg19_v1_chr15_+_40075106	188750	+	CU688250 TSC_hg19_v1_chr15_-_40212342	325929	-	AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.012184	
chr3	108537363	108537500	reg1021411.p1	7.153	+	HQ258043 AM050721 BC113502 BC113528 BC069318 AF290873 AF323084 AY358655 NM_032579 TSC_hg19_v1_chr3_-_108476258	-61286	-	AK023389 TSC_hg19_v1_chr3_+_108308549 AY227654 AK023138 BC056674 AK297451 BC063882 BC039018 AY227651	-228872	+	TSC_hg19_v1_chr3_-_108308493 AK310446 NM_020890	-228954	-	AK291991 AJ240085 AF161547 NM_016388 BC025713 AJ224878	4163	+	AF110003 EU832759 GQ129299 AF110002 BC103993 BC103994 AB593147 NM_005459	135180	-	CU690636 BC050307 AK302642 AF084946 BC028680 NM_014429	299519	-	HQ258043|RETNLB|84666|resistin like beta##AM050721|RETNLB|84666|resistin like beta##BC113502|RETNLB|84666|resistin like beta##BC113528|RETNLB|84666|resistin like beta##BC069318|RETNLB|84666|resistin like beta##AF290873|RETNLB|84666|resistin like beta##AF323084|RETNLB|84666|resistin like beta##AY358655|RETNLB|84666|resistin like beta##NM_032579|RETNLB|84666|resistin like beta##AK023389|DZIP3|9666|DAZ interacting protein 3, zinc finger##AY227654|DZIP3|9666|DAZ interacting protein 3, zinc finger##AK023138|DZIP3|9666|DAZ interacting protein 3, zinc finger##BC056674|DZIP3|9666|DAZ interacting protein 3, zinc finger##AK297451|DZIP3|9666|DAZ interacting protein 3, zinc finger##BC063882|DZIP3|9666|DAZ interacting protein 3, zinc finger##BC039018|DZIP3|9666|DAZ interacting protein 3, zinc finger##AY227651|DZIP3|9666|DAZ interacting protein 3, zinc finger##AK310446|KIAA1524|57650|KIAA1524##NM_020890|KIAA1524|57650|KIAA1524##AK291991|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ240085|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AF161547|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##NM_016388|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##BC025713|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ224878|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AF110003|GUCA1C|9626|guanylate cyclase activator 1C##EU832759|GUCA1C|9626|guanylate cyclase activator 1C##GQ129299|GUCA1C|9626|guanylate cyclase activator 1C##AF110002|GUCA1C|9626|guanylate cyclase activator 1C##BC103993|GUCA1C|9626|guanylate cyclase activator 1C##BC103994|GUCA1C|9626|guanylate cyclase activator 1C##AB593147|GUCA1C|9626|guanylate cyclase activator 1C##NM_005459|GUCA1C|9626|guanylate cyclase activator 1C##BC050307|MORC1|27136|MORC family CW-type zinc finger 1##AK302642|MORC1|27136|MORC family CW-type zinc finger 1##AF084946|MORC1|27136|MORC family CW-type zinc finger 1##BC028680|MORC1|27136|MORC family CW-type zinc finger 1##NM_014429|MORC1|27136|MORC family CW-type zinc finger 1	0.131188	
chr6	82961792	82961922	reg1015637.p1	7.153	+	TSC_hg19_v1_chr6_-_82957441 NM_015525 DQ005633 DQ005634	-4389	-	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	-4444	-	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	-499446	-	AK291170 NM_006670	111065	+	TSC_hg19_v1_chr6_+_83073565 BC037161 AK074786	111676	+	TSC_hg19_v1_chr6_+_83073996 AK074790 NM_001166392	112120	+	NM_015525|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005633|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005634|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein##BC037161|TPBG|7162|trophoblast glycoprotein##AK074786|TPBG|7162|trophoblast glycoprotein##AK074790|TPBG|7162|trophoblast glycoprotein##NM_001166392|TPBG|7162|trophoblast glycoprotein	0.984565	CTCF.p2:-11:0.985
chr9	107543196	107543298	reg1019930.p1	7.153	+	AK002137 BC017914 BX647652 NM_018376 AK310397 BC005202	-16795	+	TSC_hg19_v1_chr9_+_107509977 BC005935 NM_015469 AK301410 AF161417 AK024015 AL117557 BC045830 CU675195	-33237	+	BC140916 AB587601 NM_001004484	-86567	+	AB055982 AB445477 TSC_hg19_v1_chr9_-_107665989	122750	-	AB037924 TSC_hg19_v1_chr9_-_107666055	122804	-	BC146856 TSC_hg19_v1_chr9_-_107690419 AF285167 BC034824 BC141816 BC142693 AK022254	147137	-	AK002137|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC017914|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BX647652|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##NM_018376|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##AK310397|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC005202|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC005935|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##NM_015469|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AK301410|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AF161417|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AK024015|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AL117557|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##BC045830|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##BC140916|OR13D1|286365|olfactory receptor, family 13, subfamily D, member 1##NM_001004484|OR13D1|286365|olfactory receptor, family 13, subfamily D, member 1##AB055982|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AB445477|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AB037924|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	0.857376	CTCF.p2:8:0.857
chr14	47747574	47747692	reg1019033.p1	7.152	+	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	-626650	-	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-2024987	-	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	-2025266	-	BC028193 NM_182830	64782	-	AK309211 NM_001113498	396523	-	BC032813 BC035313 L31610 U14973 AK026649 BC015974 NM_001030001 NM_001032 AB055780 AK307833 TSC_hg19_v1_chr14_-_50053095	2305460	-	AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##BC032813|RPS29|6235|ribosomal protein S29##BC035313|RPS29|6235|ribosomal protein S29##L31610|RPS29|6235|ribosomal protein S29##U14973|RPS29|6235|ribosomal protein S29##AK026649|RPS29|6235|ribosomal protein S29##BC015974|RPS29|6235|ribosomal protein S29##NM_001030001|RPS29|6235|ribosomal protein S29##NM_001032|RPS29|6235|ribosomal protein S29##AB055780|RPS29|6235|ribosomal protein S29	0.990254	CTCF.p2:5:0.990
chr1	50834293	50834389	reg1014156.p1	7.152	+	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-258803	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-259657	+	TSC_hg19_v1_chr1_+_50574591 NM_001144774 NM_021952	-259750	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	54770	-	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	591236	-	TSC_hg19_v1_chr1_-_51425740 BC067100	591415	-	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_032110|DMRTA2|63950|DMRT-like family A2##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.327887	CTCF.p2:-36:0.328
chr4	26862039	26862174	reg1020878.p1	7.152	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-276426	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-370121	-	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	-539424	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	434	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3859893	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3860088	+	NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7	0.0	
chr6_ssto_hap7	4266853	4266958	reg1018928.p2	7.152	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999672	CTCF.p2:12:1.000
chr19	13140903	13141011	reg1019229.p2	7.151	+	HQ258405 TSC_hg19_v1_chr19_+_13135832 FJ861276 U07811	-5123	+	TSC_hg19_v1_chr19_+_13135745 L31881 BC117113 BC117115	-5197	+	TSC_hg19_v1_chr19_+_13135426 BX537794 AK295290	-5560	+	TSC_hg19_v1_chr19_+_13205957 BC036885	65033	+	TSC_hg19_v1_chr19_-_13213530 AK311530 M22637	72569	-	TSC_hg19_v1_chr19_-_13213673 BC002796	72740	-	HQ258405|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##FJ861276|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U07811|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC036885|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##M22637|LYL1|4066|lymphoblastic leukemia derived sequence 1##BC002796|LYL1|4066|lymphoblastic leukemia derived sequence 1	0.916693	CTCF.p2:-2:0.917
chr22	18237209	18237325	reg1019361.p1	7.151	+	TSC_hg19_v1_chr22_+_18121576 AL831982 BC007658	-115702	+	CR456521 TSC_hg19_v1_chr22_+_18121529 NM_015367 AK056248 AK294286 AK314489 AK291449	-115777	+	TSC_hg19_v1_chr22_+_18111627 AF246665	-125628	+	AF250233 AK094795 BC036364 NM_001244572 NM_197966 TSC_hg19_v1_chr22_-_18256811	19513	-	D89803 TSC_hg19_v1_chr22_-_18257188 AY005151 EU678292	19907	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	19940	-	AL831982|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##BC007658|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##CR456521|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##NM_015367|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##AK056248|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##AK294286|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##AK314489|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##AK291449|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##AF246665|BCL2L13|23786|BCL2-like 13 (apoptosis facilitator)##AF250233|BID|637|BH3 interacting domain death agonist##AK094795|BID|637|BH3 interacting domain death agonist##BC036364|BID|637|BH3 interacting domain death agonist##NM_001244572|BID|637|BH3 interacting domain death agonist##NM_197966|BID|637|BH3 interacting domain death agonist##D89803|BID|637|BH3 interacting domain death agonist##AY005151|BID|637|BH3 interacting domain death agonist##EU678292|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist	0.0	
chr4	154495616	154495744	reg1018775.p2	7.151	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-108188	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-229805	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-229893	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	109718	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	109750	+	TSC_hg19_v1_chr4_+_154605441 BC033756	109784	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.526769	CTCF.p2:10:0.527
chr1	113995665	113995809	reg1022395.p1	7.150	+	BC130409 BC144144 NM_001142782 NM_152900	-62263	+	TSC_hg19_v1_chr1_+_113615865 BC117368 BC117370 AB527394	-379791	+	TSC_hg19_v1_chr1_+_113615809 AK291031 CR936669 AB018349 NM_014813 AL161998	-379922	+	TSC_hg19_v1_chr1_-_114301772 NM_006608	306034	-	TSC_hg19_v1_chr1_-_114302096 BC002447	306403	-	TSC_hg19_v1_chr1_-_114354898 CU693140 CR627402	359144	-	BC130409|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##BC144144|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_001142782|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_152900|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##BC117368|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC117370|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AK291031|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##CR936669|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AB018349|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##NM_014813|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AL161998|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##NM_006608|PHTF1|10745|putative homeodomain transcription factor 1##BC002447|PHTF1|10745|putative homeodomain transcription factor 1##CR627402|RSBN1|54665|round spermatid basic protein 1	0.617797	CTCF.p2:-1:0.618
chrX	107244821	107244935	reg1019858.p2	7.150	+	BC150140 AF285598 NM_031273	-19285	-	TSC_hg19_v1_chrX_+_107069526 AF196481	-175306	+	Y18880 TSC_hg19_v1_chrX_+_107069473	-175411	+	BX648658 NM_001170553 NM_182607 AK301783 BC043216 BX640913 AK315846 AK301311 AK292472	43381	+	AB528690 BT019689 GQ129344 GQ129345 AK295996 AK309326 TSC_hg19_v1_chrX_-_107334773 AB009619 AY057056 BC011960 AK058108 D83197 NM_002814 NM_170750	89933	-	BC061696 NM_052936 NM_178270 BC041862 AK293533 AJ504651 AK314429 AJ320508 AJ320509 AK054927	90089	+	AF285598|TEX13B|56156|testis expressed 13B##NM_031273|TEX13B|56156|testis expressed 13B##AF196481|MID2|11043|midline 2##Y18880|MID2|11043|midline 2##BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1##BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1##BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1##BT019689|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129344|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129345|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK295996|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK309326|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AB009619|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AY057056|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BC011960|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK058108|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##D83197|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_002814|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_170750|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BC061696|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##NM_052936|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##NM_178270|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##BC041862|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK293533|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ504651|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK314429|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ320508|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ320509|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK054927|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)	0.951812	CTCF.p2:-8:0.952
chr1	118696995	118697110	reg1019701.p1	7.149	+	TSC_hg19_v1_chr1_+_118472364 NM_006784 AK292438 AF083217 BC128385 BC128454 BC148244	-224674	+	BC058836 TSC_hg19_v1_chr1_+_118472357	-224699	+	AK000149 BC013324 TSC_hg19_v1_chr1_-_118472244 NM_001135589 NM_017686	-224799	-	AB527095 AK091816 AX747199 AY555274 BX648110 NM_206996	30761	-	AK127536 NM_152380	835126	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	985974	+	NM_006784|WDR3|10885|WD repeat domain 3##AK292438|WDR3|10885|WD repeat domain 3##AF083217|WDR3|10885|WD repeat domain 3##BC058836|WDR3|10885|WD repeat domain 3##AK000149|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC013324|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_001135589|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_017686|GDAP2|54834|ganglioside induced differentiation associated protein 2##AK091816|SPAG17|200162|sperm associated antigen 17##AY555274|SPAG17|200162|sperm associated antigen 17##BX648110|SPAG17|200162|sperm associated antigen 17##NM_206996|SPAG17|200162|sperm associated antigen 17##AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15	0.0	
chr1	155247104	155247238	reg1018274.p2	7.149	+	TSC_hg19_v1_chr1_-_155243282 BC014067 L29216 L29218 BC002346 BC053603 AK303696 NM_003993	-4102	-	TSC_hg19_v1_chr1_-_155232152 NM_005698 NM_052837	-15029	-	TSC_hg19_v1_chr1_-_155232056 BC005135 AF005039 BC010505 BC000161	-15133	-	TSC_hg19_v1_chr1_+_155247250 AK299333 BC111364 AF488550 NM_020897 AK055840 AB040968	206	+	AK291995 TSC_hg19_v1_chr1_-_155247591	374	-	AK298399 M15465 AK225947 NM_181871	23593	-	BC014067|CLK2|1196|CDC-like kinase 2##L29216|CLK2|1196|CDC-like kinase 2##L29218|CLK2|1196|CDC-like kinase 2##BC053603|CLK2|1196|CDC-like kinase 2##AK303696|CLK2|1196|CDC-like kinase 2##NM_003993|CLK2|1196|CDC-like kinase 2##NM_005698|SCAMP3|10067|secretory carrier membrane protein 3##NM_052837|SCAMP3|10067|secretory carrier membrane protein 3##BC005135|SCAMP3|10067|secretory carrier membrane protein 3##AF005039|SCAMP3|10067|secretory carrier membrane protein 3##BC010505|SCAMP3|10067|secretory carrier membrane protein 3##BC000161|SCAMP3|10067|secretory carrier membrane protein 3##AK299333|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3##BC111364|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3##AF488550|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3##NM_020897|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3##AK055840|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3##AB040968|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3##AK291995|CLK2|1196|CDC-like kinase 2##AK298399|PKLR|5313|pyruvate kinase, liver and RBC##M15465|PKLR|5313|pyruvate kinase, liver and RBC##AK225947|PKLR|5313|pyruvate kinase, liver and RBC##NM_181871|PKLR|5313|pyruvate kinase, liver and RBC	0.573769	CTCF.p2:14:0.574
chr11	92958913	92959065	reg1021592.p1	7.149	+	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	-27904	-	TSC_hg19_v1_chr11_-_92930978 CU690400	-28002	-	BC069163 NM_005959 U25341 AY521019	-256150	+	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	104854	+	AF197137 TSC_hg19_v1_chr11_-_93276558 BC031564 NM_020179	317546	-	TSC_hg19_v1_chr11_+_93394847 NM_033395 BC015989 BC017394	435845	+	AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B##NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67##AF197137|C11orf75|56935|chromosome 11 open reading frame 75##BC031564|C11orf75|56935|chromosome 11 open reading frame 75##NM_020179|C11orf75|56935|chromosome 11 open reading frame 75##NM_033395|KIAA1731|85459|KIAA1731##BC015989|KIAA1731|85459|KIAA1731##BC017394|KIAA1731|85459|KIAA1731	0.831578	CTCF.p2:10:0.832
chr6	79960079	79960209	reg1017521.p2	7.149	+	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	-15719	-	L40357 TSC_hg19_v1_chr6_-_79944391 AF401520 AF274949 BC009529	-15786	-	TSC_hg19_v1_chr6_-_79787972 AK057039 NM_017934	-172087	-	TSC_hg19_v1_chr6_-_80247114 AK299314 BX648161 BC050327 NM_001122769 NM_181714	286985	-	TSC_hg19_v1_chr6_+_80341019 AF340151 NM_031469 BC109043 BC109044 AK311757 BC040489 AK074506 BC052987 BC060799 BC070059 AJ297972	380930	+	NM_001243308	619992	-	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3##L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3##BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3##AK057039|PHIP|55023|pleckstrin homology domain interacting protein##NM_017934|PHIP|55023|pleckstrin homology domain interacting protein##AK299314|LCA5|167691|Leber congenital amaurosis 5##BX648161|LCA5|167691|Leber congenital amaurosis 5##BC050327|LCA5|167691|Leber congenital amaurosis 5##NM_001122769|LCA5|167691|Leber congenital amaurosis 5##NM_181714|LCA5|167691|Leber congenital amaurosis 5##AF340151|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_031469|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109043|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109044|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK311757|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC040489|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK074506|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC052987|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC060799|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC070059|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AJ297972|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7	0.342236	CTCF.p2:0:0.342
chr3	14957456	14957581	reg1020615.p1	7.148	+	NM_152536	-97050	+	NM_001184957 NM_001184958 NM_032137 AK131481 BC030599 AL834386 AL136781 BC038406	-240873	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	-264235	+	TSC_hg19_v1_chr3_-_14988966 BC014104 BC063441 BC039246	31438	-	TSC_hg19_v1_chr3_-_14989000 AK055924	31519	-	TSC_hg19_v1_chr3_+_14989089 AK290590 L27586 NM_003298	31637	+	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5##NM_001184957|C3orf20|84077|chromosome 3 open reading frame 20##NM_001184958|C3orf20|84077|chromosome 3 open reading frame 20##NM_032137|C3orf20|84077|chromosome 3 open reading frame 20##AK131481|C3orf20|84077|chromosome 3 open reading frame 20##BC030599|C3orf20|84077|chromosome 3 open reading frame 20##AL834386|C3orf20|84077|chromosome 3 open reading frame 20##AL136781|C3orf20|84077|chromosome 3 open reading frame 20##BC038406|C3orf20|84077|chromosome 3 open reading frame 20##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19##BC014104|LOC100505641|100505641|uncharacterized LOC100505641##BC063441|LOC100505641|100505641|uncharacterized LOC100505641##BC039246|LOC100505641|100505641|uncharacterized LOC100505641##AK055924|LOC100505641|100505641|uncharacterized LOC100505641##AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2##L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2##NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	0.049999	
chr10	61666307	61666467	reg1018406.p1	7.147	+	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-63	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	-186	-	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-196663	-	AK292927 AK092527 NM_001149	234329	-	U13616 NM_020987	483173	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	666303	-	BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##S72869|CCDC6|8030|coiled-coil domain containing 6##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.0	
chr1	27438668	27438801	reg1021651.p1	7.147	+	TSC_hg19_v1_chr1_-_27339448 AK122816	-99280	-	BC012790 BC014160 NM_052943 TSC_hg19_v1_chr1_-_27339338	-99400	-	TSC_hg19_v1_chr1_+_27320182 NM_001013642 BC069216	-118541	+	M96066 S68616 NM_003047 TSC_hg19_v1_chr1_-_27481521	42727	-	NM_015023 TSC_hg19_v1_chr1_+_27561056	122300	+	TSC_hg19_v1_chr1_+_27561124 AK315564	122393	+	AK122816|FAM46B|115572|family with sequence similarity 46, member B##BC012790|FAM46B|115572|family with sequence similarity 46, member B##BC014160|FAM46B|115572|family with sequence similarity 46, member B##NM_052943|FAM46B|115572|family with sequence similarity 46, member B##NM_001013642|TRNP1|388610|TMF1-regulated nuclear protein 1##BC069216|TRNP1|388610|TMF1-regulated nuclear protein 1##M96066|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##S68616|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_003047|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1	0.0	
chr14	107020173	107020283	reg1020032.p2	7.147	+	TSC_hg19_v1_chr14_-_107013478 AK093806 AK097303 AK125632 AK126320 AK129510 AX748317	-6752	-	DQ187707 GU552700 GU552764 AY003783 EF175429 FJ694883 EU099078 EU099213 AM183990 EU099124 HM774924 HM774242 JN110729 JN110849 AF103239 FJ385422 FJ385433 HM773968 HM773995 HM774338 HM774389 HM774601 HM774867 HM996424 HQ704020 FJ385411 EU146318 JN110975 AF062300 AF062305 DQ524053 HM994912 HM994914 HM994916 HM994920 HM995673 HM995674 HM995675 HM995676 HM995783 HM995910 HM995945 HM996441 HM996522 AF062299 AF471505 DQ187607 DQ322806 DQ840692 DQ840693 DQ840702 DQ840814 AM279609 DQ926615 EF178081 X99992 AB063924 AB066892 AB066969 AB067011 AB067080 AB067263 AF394199 AF455925 AF459632 AF471500 AF471503 AF471504 AJ300805 AJ579185 AY055477 AY055483 AY640482 AY941852 D83692 DQ005278 DQ005282 DQ100801 DQ926649 GU570351 GU570352 GU570354 L12185 L12186 X64240 Y11898 Z96974 HM995768 AJ519245 AJ519224 AJ519230 AJ519233 AJ519246 AJ519249 AJ519251 AJ519253 AJ519255 HM995877 AJ519222 AJ519299 AY393054 AY393058 AY393158 AY393161 AY190818 Z36887 AY623427 X52894 BC090938 TSC_hg19_v1_chr14_-_107013458	-6938	-	GQ232968 DQ454715 DQ454740 DQ454804 FJ840179 GU552701 FJ840340 GQ232950 GQ232981 GU552754 DQ454538 DQ454540 DQ454585 DQ523858 GU552713 AY003858 DQ454386 DQ454541 DQ454621 DQ454676 GU552719 GU552720 GU552767 AY003800 EF566901 DQ454598 DQ454606 DQ454788 DQ455001 DQ454592 Z11947 FJ873823 FJ873826 FJ873839 FJ873846 FJ873864 FJ873876 FJ873933 FJ873992 HM116214 EF175393 AY003851 EF175424 EU350424 GU358679 JF810268 EU099085 EU099261 AY206990 AF103064 AM279530 HM996031 GQ903512 AF103334 AF062095 AF103183 AF103113 L07311 AF165109 AY062321 HM774774 JN110645 JN110658 JN110671 JN110688 JN110706 JN110718 FJ385349 HM774039 HM774378 HM774566 HM774910 HQ704000 HQ704008 HQ704009 AY062300 HM774238 HM775050 AF103319 AF194121 HM775049 DQ100804 EU146317 EU146347 EU146389 DQ100818 DQ100905 AJ006652 AF485463 AF485473 AY423189 AY423190 AY423196 AY423198 AY423199 AY423207 HM996483 AF103257 AY941883 DQ100909 AF006520 AJ249628 AY866746 DQ187712 DQ524024 GU570284 HM995016 HM995139 HM995190 HM995191 HM995236 HM995887 HM995889 HM995890 HM995891 HM995919 HM996054 HM996304 HM996511 AJ245323 AJ245324 DQ322799 DQ840839 DQ840841 DQ926120 DQ926247 DQ926326 AB374202 AF115123 AF174048 AJ245353 AJ245354 AJ245355 AJ278773 AY640567 AY866807 AY941926 AY944711 DQ100900 DQ100918 DQ926040 DQ926081 DQ926084 DQ926450 DQ926565 DQ926602 DQ926604 EU794403 Z18824 AB021525 AB063673 AB363090 AB363101 AB363126 AB363166 AF021949 AF021979 AF035023 AF052525 AF062215 AF062235 AF129457 AF174081 AF398962 AF408730 AF455546 AF455553 AF471175 AF471178 AF471201 AF471216 AF471265 AF471373 AF471475 AF471476 AF471477 AF471486 AF471490 AF471494 AF471528 AJ239363 AJ239370 AJ389190 AJ413993 AJ627249 AM040520 AM040566 AM259133 AM259134 AY466507 AY866733 AY866738 AY866759 AY866795 AY941854 AY941870 AY941906 AY941952 AY941974 AY941976 AY941980 AY962566 D83682 DQ065617 DQ205182 DQ212502 DQ212503 DQ535300 DQ535366 DQ535419 DQ535472 DQ926167 DQ926385 DQ926389 DQ926413 DQ926426 DQ926459 DQ926557 DQ926616 EF177950 EU549721 FJ492926 GQ903506 GU570336 GU570338 GU570341 HM152510 U00501 U77374 X59703 X87449 Z33898 Z96965 Z98722 AF283800 AJ519241 HM995874 AJ519332 L28051 AJ519250 AJ519294 AY392920 AY393056 L08082 AF062182 AF062206 AF062253 AF062285 AY190818 X81729 Z47218 TSC_hg19_v1_chr14_-_106994347 AK097076 AK097206 AK097859 AK126358 AK128664 AK130501 AK301358 BX640853 BX640854	-26054	-	AF267786 AF460742 AF460743 DQ454547 DQ454549 DQ454453 DQ454546 DQ454587 DQ454772 DQ523855 DQ454644 GU552737 DQ454456 DQ454588 DQ454927 EU433863 DQ454420 DQ454430 DQ454879 DQ454417 DQ454704 DQ454916 DQ454924 DQ454969 GU552772 DQ454423 DQ455004 EU099273 GU552771 DQ454935 DQ523903 DQ454770 DQ454843 FJ840010 FJ840025 FJ840144 FJ840161 FJ840267 FJ840276 FJ840292 FJ840293 FJ840346 FJ840350 FJ840358 FJ840360 FJ840363 FJ873816 FJ873820 FJ873848 FJ873865 FJ873868 FJ873928 FJ873940 FJ873954 FJ873964 FJ873985 FJ874015 FJ874045 FJ874091 GQ232837 HM116178 HM116213 HM116223 AJ008166 EU433880 GQ232769 GQ232840 GQ232959 EF175426 FJ694889 EF441751 EF441753 AY998718 U44492 U44503 U44504 U44505 AF017462 AJ008170 AJ008172 AJ008178 AJ008203 AJ487495 AJ230634 AJ230635 AJ230636 AJ230637 AJ230638 AJ230640 AJ230641 AJ230642 AJ230643 AJ230644 AJ230646 AJ230649 AJ230652 AJ230655 AJ230656 AJ230657 M34028 AY577299 S73611 S73613 FJ385326 GQ232913 GQ232958 GU552732 GU552750 AM279543 AF085655 AF085656 EU099270 AM233802 AM233804 EU099059 EU099279 EU099288 GQ232907 AF209895 AF209899 AF211932 AF343357 AF343358 AF343374 AF343390 AF343395 AF343401 AF343405 AF343419 AF343420 U86784 AJ862553 AJ862555 AJ862556 AJ862558 AJ862559 AJ862560 AJ862561 AJ862562 AJ862563 AJ862564 AJ862566 AJ862569 AJ862573 AM233783 AM233785 AM233805 AM233806 AM233807 AM233841 AY062302 HM774009 HM996214 AF103038 EU099234 HM773977 HM774742 AY062301 HM773976 HM774100 HM774513 HM774833 HM775004 HQ704065 HQ704066 HQ704067 HQ704068 AF103039 HM774204 HM774915 JN110745 JN110851 JN111173 JN111174 JN111195 JN111203 JN111206 JN111213 L04327 L04331 FJ385346 FJ385432 HM774001 HM774101 HM774244 HM774256 HM774288 HM774294 HM774334 HM774417 HM774549 HM774581 HM774591 HM774745 HM774776 HM774778 HM774796 HM774808 HM774855 HM774958 HM774983 HQ704004 HQ704052 HM775063 Z46853 AF103177 DQ524149 EU146312 EU146344 EU146346 EU146382 AB067195 AF103056 AY393315 AY393569 AY393571 EU099233 AF306373 AJ580927 AY062322 AY376089 U70236 AY393249 AY393314 AY393316 AY393318 AY393319 AY393320 AY393321 AY393455 AY393456 AY393457 AY393458 AY393459 AY393463 AY393466 AY393471 AY393566 AY393567 AY393568 AY393570 AY393572 AY393573 EU099231 EU099232 M34022 U00574 AF110479 AY062303 DQ926264 DQ926266 DQ926273 AF129750 AM233827 AM233828 AM233830 AM233831 AM233832 AM233833 AM233836 AM233838 AY640515 AB066833 AY941987 DQ168569 HM996472 HQ378399 AF021959 AJ239373 AJ272398 AJ555263 AY685303 DQ100803 DQ490742 DQ523920 DQ523934 DQ523971 DQ524022 DQ524049 DQ524147 DQ524150 DQ524160 DQ926054 GU570396 GU570398 HM995095 HM995420 HM995456 HM995460 HM995529 HM995571 HM995573 HM995577 HM995607 HM995969 HM996171 HM996234 HM996245 HM996273 HM996421 HM996528 HM996547 HQ378338 U77555 X94019 X94043 Z46759 HM995213 AB063835 AB063897 AB063925 AB066826 AB066832 AB066935 AB067154 AB067157 AB067159 AB067175 AB067326 AB067330 AB067334 AB067392 AB245095 AF174110 AF394197 AM279622 AY640502 AY640546 AY941916 AY941923 AY941958 AY971039 AY971068 AY971072 AY971073 AY971085 AY971113 AY971118 AY971121 AY971122 DQ100861 DQ100955 DQ100988 DQ490743 DQ926034 DQ926082 DQ926086 DQ926177 DQ926233 DQ926269 DQ926292 DQ926295 DQ926339 DQ926351 DQ926360 DQ926597 DQ926609 DQ926637 DQ926643 DQ926654 EU794427 EU794430 EU794443 FJ385310 FJ385369 GU570400 GU570406 HQ378329 HQ378361 HQ378384 X61649 AB063926 AB066971 AB066985 AB067015 AB067070 AB067074 AB067100 AB067116 AB067125 AB067129 AB067241 AF062125 AF062157 AF078940 AF078941 AF099197 AF110480 AF110484 AF110486 AF110487 AF174068 AF442760 AJ002767 AJ002771 AJ002772 AJ002773 AJ002774 AJ002775 AJ006165 AJ249378 AJ249636 AJ276099 AJ399826 AJ414007 AJ491906 AJ491907 AJ491913 AJ491914 AJ555254 AY033242 AY033243 AY033250 AY033274 AY033275 AY033276 AY033281 AY033282 AY033286 AY033288 AY640520 AY781870 AY941877 AY941878 AY941879 AY941919 AY941920 AY941921 AY971098 DQ065619 DQ065621 DQ065625 DQ065655 DQ065657 DQ065658 DQ205181 DQ379476 DQ490737 DQ490744 DQ926149 DQ926201 DQ926390 DQ926391 DQ926462 DQ926465 DQ926503 DQ926525 DQ926533 DQ926560 HM152490 HQ378409 L12198 L26537 U22381 U44493 U77538 U77539 U77541 U77544 U77547 U77548 U77549 U77550 U77551 U77552 U77553 U77557 U77558 U77559 U77560 U77561 U77562 U77563 U77564 U77565 U77566 U77567 X87447 X94002 X94004 X94005 X94006 X94028 X94029 X94030 X94031 X94032 X94038 X94039 X94041 X94044 X94045 X94046 X94048 X94050 X94051 X94052 X94053 X94055 X94058 X94059 X94061 X94062 X94063 X94066 X94071 X94072 X94073 X94077 Z46760 Z97037 DQ535275 DQ535319 DQ535340 DQ535347 DQ535361 DQ535401 DQ535430 DQ535447 DQ535450 DQ535454 DQ535458 DQ926623 EF177983 EF177986 EF178042 EF178049 EF178067 EF178105 FJ195497 FJ195499 FJ195517 FJ195521 FJ195527 FJ195537 JN252502 Z26829 Z26830 Z26832 Z26833 Z26839 Z26842 Z26843 Z26844 HM995790 HM995656 HM995886 M27125 U77535 U77543 U77554 U77556 AY393198 AY393202 HM995637 HM995880 AY392957 AY392958 AY392962 AY392964 AY392965 AY392966 AY392968 AY392969 AY392970 AY392976 AY392978 AY392980 AY392984 AY393084 AY393086 AY393087 AY393088 AY393090 AY393092 AY393094 AY393096 AY393097 AY393185 AY393186 AY393187 AY393188 AY393189 AY393191 AY393192 AY393193 AY393194 AY393195 AY393196 AY393197 AY393199 AY393200 AY393201 AY393203 AY393204 AF085657 AF085658 AF085659 AM233808 AF052379 AF062154 AF062214 AF348829 AF348830 AF348831 AF348832 AF348833 AF348834 AJ131060 AM233779 AM233780 AM233803 AM233834 AM233839 AY190828 L03679 X65912 X65913 X65914 X65915 Z47219 Z47225 X58402 BC014258 X58401 X58400 X58397 BC089417 BC078670 TSC_hg19_v1_chr14_-_107035221	14763	-	AF028099 AF460754 DQ454615 DQ523869 GQ232779 GQ232881 GU552765 FJ873979 FJ873984 FJ874049 FJ874062 FJ874084 DQ454628 AY003743 AY003830 DQ523889 DQ523867 DQ454655 DQ523892 DQ523925 FJ840112 FJ840322 FJ873963 DQ454805 DQ523873 FJ840063 FJ840064 FJ840091 FJ840093 FJ840096 FJ840098 FJ840147 FJ840240 FJ840275 FJ840277 FJ840278 FJ840279 FJ840280 FJ840281 FJ840282 FJ840283 FJ840285 FJ840286 FJ840288 FJ840289 FJ840290 FJ840291 FJ840294 FJ840296 FJ840298 FJ840299 FJ840300 FJ840301 FJ840303 FJ873817 FJ873838 FJ873840 FJ873886 FJ873926 FJ873934 FJ874029 FJ874031 FJ874050 FJ874058 AJ008233 DQ523926 AY003838 AY003851 EF175410 EF091918 EU667609 JF810270 EU099077 EU099148 AF103213 AJ010335 AM183984 DQ097899 HM774214 EF555586 AF062229 FJ385338 FJ385339 FJ385347 GQ504915 GQ504957 HM774086 HM774115 HM774155 HM774774 EU146321 S73143 U85229 AY062306 AF035787 AF035788 DQ100793 DQ100813 AY941912 DQ187711 DQ524134 DQ926275 HM995353 HM995355 HM995441 HM995442 HM995443 HM995444 HM995445 HM995446 HM995470 HM995471 HM995475 HM995476 HM996019 HM996347 DQ187673 DQ322745 DQ322877 DQ322968 DQ322969 DQ322970 DQ322971 DQ322972 U00540 AB373623 AY530312 AY530316 AY686913 AY941884 AY986398 DQ100978 DQ926080 DQ926111 DQ926299 DQ926303 DQ926575 DQ926577 DQ926583 DQ926598 AB066888 AB067000 AB363089 AB363160 AB373617 AB373626 AF006517 AF006525 AF035042 AF174059 AF471510 AF471512 AF471528 AF471529 AF471530 AJ389169 AJ488540 AJ556641 AJ579109 AJ579266 AY640512 AY686909 AY941887 AY941891 AY941915 DQ535286 DQ535377 DQ535410 DQ926146 DQ926152 DQ926467 EF177944 EF177957 EF178005 EF178011 EF178016 EF178078 EF178107 FJ195522 FJ773245 FJ773246 GU570355 HM152495 HM152503 HM152507 HM451460 S76131 U00490 U00498 U00567 X62958 X64243 X77472 X99353 Z33902 Z33904 Z96964 M18520 M18521 HM995907 AY393055 AF062122 AJ548507 AY190822 X81724 X81730 X81735 L08085 BC072419 X61011 AK092785 AX747729 TSC_hg19_v1_chr14_-_107049194	28717	-	AB063741 AY393018 AF062170 AY393124 Z47215 AK126281 TSC_hg19_v1_chr14_-_107066261	45936	-	AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF035023|IGHV3-48|28424|immunoglobulin heavy variable 3-48##AK097076|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097859|IGHM|3507|immunoglobulin heavy constant mu##AK128664|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130501|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640854|IGH@|3492|immunoglobulin heavy locus##BC014258|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089417|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC078670|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC072419|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126281|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.991225	CTCF.p2:3:0.991
chr1	56167884	56167987	reg1019686.p1	7.147	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-486851	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-486899	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-662711	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	877084	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	877195	-	AK312439 TSC_hg19_v1_chr1_-_57045216	877282	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.0	
chr5	112999719	112999822	reg1019291.p1	7.147	+	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	-150374	+	AK128596 NM_001085377	-175244	-	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	-229138	-	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	698279	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	698691	+	BC015371 NM_170775 BC040722	769479	+	AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2##AK128596|MCC|4163|mutated in colorectal cancers##NM_001085377|MCC|4163|mutated in colorectal cancers##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	0.957795	CTCF.p2:4:0.958
chrX	130887310	130887455	reg1019241.p3	7.146	+	BC137050 AB529233 NM_001004486	-209384	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-463970	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-464120	-	TSC_hg19_v1_chrX_-_130964633 AK097911	77269	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	269939	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	270258	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.0	
chr12	40730495	40730643	reg1022837.p1	7.145	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	-111710	+	TSC_hg19_v1_chr12_-_40499870 BC047507	-230697	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	-230880	-	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	355713	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	851639	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	1101018	+	NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4	0.140696	
chr15	30904411	30904551	reg1023577.p1	7.145	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-218769	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-789858	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-790139	-	TSC_hg19_v1_chr15_+_30918372 BC071990	13905	+	BC105788 NM_001039841	14397	+	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	291593	+	BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1	0.864445	CTCF.p2:-10:0.836
chr2	212022696	212022833	reg1022373.p1	7.145	+	AK316425 NM_001122634 AK302778 AY317138	-564679	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-601375	+	NM_001122633 AB208800	-680346	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	1380551	-	AK301503 AF130863 NM_016260	1992291	-	BC028936 NM_001079526	1993568	-	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	0.994802	CTCF.p2:6:0.995
chr6	81048097	81048241	reg1019101.p2	7.145	+	TSC_hg19_v1_chr6_+_80816397 AK289977 BC040139 M55575 AB529112 BT020063 X52446	-231732	+	TSC_hg19_v1_chr6_+_80816387 AK316545 BC034481	-231786	+	TSC_hg19_v1_chr6_+_80816367 NM_000056 NM_183050 AK304353 U50708	-231842	+	AY740520 FJ211061 CU674334 CU675631 TSC_hg19_v1_chr6_-_82461975	1413752	-	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	1414242	-	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	1909244	-	AK289977|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC040139|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##M55575|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BT020063|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##X52446|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK316545|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC034481|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##NM_000056|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##NM_183050|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK304353|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##U50708|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AY740520|FAM46A|55603|family with sequence similarity 46, member A##AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase	0.99643	CTCF.p2:-12:0.996
chr8	76395704	76395832	reg1020310.p1	7.145	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	-75580	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-498859	+	CR749657 NM_015886	-658997	+	BX571750 NM_004133 EU832451 HQ692842	56446	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	1197742	+	AB083343 TSC_hg19_v1_chr8_+_77593533	1197760	+	BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15##BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4##AB083343|ZFHX4|79776|zinc finger homeobox 4	0.086178	
chr20	3057598	3057685	reg1018314.p1	7.144	+	X03173 TSC_hg19_v1_chr20_+_3052956	-4744	+	BC069144 NM_000915 BC101841 BC101843 M25650 AB463993 M62611	-5322	+	TSC_hg19_v1_chr20_+_3026675 NM_030811 BC013018 AF308301	-30947	+	AF031476 M25647 X03172 BC126196 BC126224 BC018062 NM_000490	7711	-	BC000515 TSC_hg19_v1_chr20_-_3140500 AK222876 AK301748 BC064544 BC011856	82847	-	TSC_hg19_v1_chr20_-_3140509 AK022444 AK023211 BC046122	82873	-	X03173|OXT|5020|oxytocin, prepropeptide##BC069144|OXT|5020|oxytocin, prepropeptide##NM_000915|OXT|5020|oxytocin, prepropeptide##BC101841|OXT|5020|oxytocin, prepropeptide##BC101843|OXT|5020|oxytocin, prepropeptide##M25650|OXT|5020|oxytocin, prepropeptide##M62611|OXT|5020|oxytocin, prepropeptide##NM_030811|MRPS26|64949|mitochondrial ribosomal protein S26##BC013018|MRPS26|64949|mitochondrial ribosomal protein S26##AF308301|MRPS26|64949|mitochondrial ribosomal protein S26##AF031476|AVP|551|arginine vasopressin##M25647|AVP|551|arginine vasopressin##X03172|AVP|551|arginine vasopressin##BC126196|AVP|551|arginine vasopressin##BC126224|AVP|551|arginine vasopressin##BC018062|AVP|551|arginine vasopressin##NM_000490|AVP|551|arginine vasopressin##BC000515|UBOX5|22888|U-box domain containing 5##AK222876|UBOX5|22888|U-box domain containing 5##AK301748|FASTKD5|60493|FAST kinase domains 5##BC064544|UBOX5|22888|U-box domain containing 5##BC011856|FASTKD5|60493|FAST kinase domains 5##AK022444|UBOX5|22888|U-box domain containing 5##AK023211|FASTKD5|60493|FAST kinase domains 5##BC046122|UBOX5|22888|U-box domain containing 5	0.988417	CTCF.p2:1:0.988
chr2	190663604	190663717	reg1019519.p1	7.144	+	BC036376 TSC_hg19_v1_chr2_+_190649225 BC008410 AK295602 AK308311 BC084548 AY540751 AK297440 BC096330 BC096331 BC096332 AK316215 AK304634	-14460	+	TSC_hg19_v1_chr2_-_190649075 AK074756 NM_001128150 NM_016467	-14562	-	TSC_hg19_v1_chr2_-_190649062 AF151036 AF395704 AK313533 BC005200	-14626	-	AF019627 AB527883 EU446953 BC074757 AK291524 AF104922 NM_005259	263727	-	NM_001042521	338825	+	NM_001042520	351311	+	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AF151036|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AF395704|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AK313533|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##BC005200|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AF019627|MSTN|2660|myostatin##EU446953|MSTN|2660|myostatin##BC074757|MSTN|2660|myostatin##AK291524|MSTN|2660|myostatin##AF104922|MSTN|2660|myostatin##NM_005259|MSTN|2660|myostatin##NM_001042521|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88	0.842996	CTCF.p2:-12:0.843
chr6	38941112	38941230	reg1019489.p2	7.144	+	AF527621 NM_001206927	-258055	+	TSC_hg19_v1_chr6_-_38670922 NM_006708	-270234	-	AK312662 TSC_hg19_v1_chr6_-_38670921	-270251	-	BC112126 BC113493 NM_002062 TSC_hg19_v1_chr6_+_39016556 U01104 L23503 AB463688 U01156 U01157	75415	+	AF086405 TSC_hg19_v1_chr6_-_39072506	131288	-	TSC_hg19_v1_chr6_-_39082938 CR627244 AK001963 NM_018322 EU832483 EU832563 BC022007	141675	-	AF527621|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_001206927|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_006708|GLO1|2739|glyoxalase I##AK312662|GLO1|2739|glyoxalase I##BC112126|GLP1R|2740|glucagon-like peptide 1 receptor##BC113493|GLP1R|2740|glucagon-like peptide 1 receptor##NM_002062|GLP1R|2740|glucagon-like peptide 1 receptor##U01104|GLP1R|2740|glucagon-like peptide 1 receptor##L23503|GLP1R|2740|glucagon-like peptide 1 receptor##U01156|GLP1R|2740|glucagon-like peptide 1 receptor##U01157|GLP1R|2740|glucagon-like peptide 1 receptor##AF086405|C6orf64|55776|chromosome 6 open reading frame 64##CR627244|C6orf64|55776|chromosome 6 open reading frame 64##AK001963|C6orf64|55776|chromosome 6 open reading frame 64##NM_018322|C6orf64|55776|chromosome 6 open reading frame 64##EU832483|C6orf64|55776|chromosome 6 open reading frame 64##EU832563|C6orf64|55776|chromosome 6 open reading frame 64##BC022007|C6orf64|55776|chromosome 6 open reading frame 64	0.035134	
chr1	234908201	234908381	reg1018811.p1	7.143	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-12517	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-163045	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-164433	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	383798	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	383940	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	416272	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr19	4167637	4167737	reg1016793.p1	7.142	+	TSC_hg19_v1_chr19_+_4153636 AK313099 AB050902 AK172839 NM_032607 AB073612 BC101504 BC143609 BC143610 BC101508 EU446882	-14020	+	TSC_hg19_v1_chr19_-_4124145 BC000471 NM_030662	-43554	-	AB463893 DQ893601 DQ895060 L11285 BC018645 TSC_hg19_v1_chr19_-_4124114 BX538081	-43695	-	TSC_hg19_v1_chr19_-_4182561 DQ896358 EU176413 AB528632 CR457200 CU678868 BC005026 BC000090 BC004218 AK299420 BC028220 AK293348 AK315048 AK301247 AK074810 AK225567 AF233396 NM_001193285 NM_016539	14858	-	NM_133475	15663	+	BC015364 L08187 NM_005755 BC046112 AB528398 DQ891589 EU176581 CU677281	61833	+	AK313099|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB050902|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AK172839|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##NM_032607|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB073612|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101504|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143609|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143610|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101508|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##EU446882|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC000471|MAP2K2|5605|mitogen-activated protein kinase kinase 2##NM_030662|MAP2K2|5605|mitogen-activated protein kinase kinase 2##DQ893601|MAP2K2|5605|mitogen-activated protein kinase kinase 2##DQ895060|MAP2K2|5605|mitogen-activated protein kinase kinase 2##L11285|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BC018645|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BX538081|MAP2K2|5605|mitogen-activated protein kinase kinase 2##DQ896358|SIRT6|51548|sirtuin 6##EU176413|SIRT6|51548|sirtuin 6##CR457200|SIRT6|51548|sirtuin 6##BC005026|SIRT6|51548|sirtuin 6##BC004218|SIRT6|51548|sirtuin 6##AK299420|SIRT6|51548|sirtuin 6##BC028220|SIRT6|51548|sirtuin 6##AK293348|SIRT6|51548|sirtuin 6##AK315048|SIRT6|51548|sirtuin 6##AK301247|SIRT6|51548|sirtuin 6##AK074810|SIRT6|51548|sirtuin 6##AK225567|SIRT6|51548|sirtuin 6##AF233396|SIRT6|51548|sirtuin 6##NM_001193285|SIRT6|51548|sirtuin 6##NM_016539|SIRT6|51548|sirtuin 6##NM_133475|ANKRD24|170961|ankyrin repeat domain 24##BC015364|EBI3|10148|Epstein-Barr virus induced 3##L08187|EBI3|10148|Epstein-Barr virus induced 3##NM_005755|EBI3|10148|Epstein-Barr virus induced 3##BC046112|EBI3|10148|Epstein-Barr virus induced 3##DQ891589|EBI3|10148|Epstein-Barr virus induced 3##EU176581|EBI3|10148|Epstein-Barr virus induced 3	0.978547	CTCF.p2:-13:0.979
chr5	160214391	160214508	reg1019753.p2	7.142	+	AK025130 TSC_hg19_v1_chr5_-_160112393	-102110	-	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-365546	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-365595	+	AB018258 AK295081 AK090832 AX746642 NM_025153	64682	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	760677	-	NM_000811	898208	+	AK025130|ATP10B|23120|ATPase, class V, type 10B##BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6	0.693998	CTCF.p2:9:0.694
chr5	168975462	168975580	reg1019120.p1	7.142	+	AB383998 AK310549 TSC_hg19_v1_chr5_-_168728144 BC142665 BC142717 AY358884 AB017169 BC098388 AB011538 BC146759 NM_003062	-247563	-	TSC_hg19_v1_chr5_-_168271862 BC023515	-703662	-	TSC_hg19_v1_chr5_-_168006609 BC013705 NM_024594	-969006	-	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	35200	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	88723	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	88779	+	AK310549|SLIT3|6586|slit homolog 3 (Drosophila)##BC142665|SLIT3|6586|slit homolog 3 (Drosophila)##BC142717|SLIT3|6586|slit homolog 3 (Drosophila)##AY358884|SLIT3|6586|slit homolog 3 (Drosophila)##AB017169|SLIT3|6586|slit homolog 3 (Drosophila)##BC098388|SLIT3|6586|slit homolog 3 (Drosophila)##AB011538|SLIT3|6586|slit homolog 3 (Drosophila)##BC146759|SLIT3|6586|slit homolog 3 (Drosophila)##NM_003062|SLIT3|6586|slit homolog 3 (Drosophila)##BC013705|PANK3|79646|pantothenate kinase 3##NM_024594|PANK3|79646|pantothenate kinase 3##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2	0.138209	
chr5	74215460	74215566	reg1017827.p2	7.142	+	AB020695 NM_015566 AK290004	-52875	-	BC039003 TSC_hg19_v1_chr5_+_74161735	-53787	+	BC005288 AK313784 AF372458 AF077615 NM_014886 AJ012409	-152426	+	AF132035 NM_016591	111210	-	AK097510 NM_001164443	317189	-	NM_000859 NM_001130996 TSC_hg19_v1_chr5_+_74633004	417491	+	AB020695|FAM169A|26049|family with sequence similarity 169, member A##NM_015566|FAM169A|26049|family with sequence similarity 169, member A##AK290004|FAM169A|26049|family with sequence similarity 169, member A##BC039003|LOC441086|441086|uncharacterized LOC441086##BC005288|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AK313784|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF372458|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF077615|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##NM_014886|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AJ012409|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF132035|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##NM_016591|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##AK097510|ANKRD31|256006|ankyrin repeat domain 31##NM_001164443|ANKRD31|256006|ankyrin repeat domain 31##NM_000859|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##NM_001130996|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase	0.190149	
chr8	98271378	98271474	reg1020500.p2	7.142	+	TSC_hg19_v1_chr8_+_97657592 AF107834	-613824	+	TSC_hg19_v1_chr8_+_97657589 AK296013	-613840	+	TSC_hg19_v1_chr8_+_97657537 BC020689 NM_016134 AK075132 AK304008 AK315447	-613932	+	CU692280 AB384285 AB051537 TSC_hg19_v1_chr8_-_98290135	18682	-	TSC_hg19_v1_chr8_-_98290171 BC045630 NM_033512	18747	-	TSC_hg19_v1_chr8_-_98290193 AK091445 AX746987	18793	-	AF107834|PGCP|10404|plasma glutamate carboxypeptidase##AK296013|PGCP|10404|plasma glutamate carboxypeptidase##BC020689|PGCP|10404|plasma glutamate carboxypeptidase##NM_016134|PGCP|10404|plasma glutamate carboxypeptidase##AK075132|PGCP|10404|plasma glutamate carboxypeptidase##AK304008|PGCP|10404|plasma glutamate carboxypeptidase##AK315447|PGCP|10404|plasma glutamate carboxypeptidase##AB051537|TSPYL5|85453|TSPY-like 5##BC045630|TSPYL5|85453|TSPY-like 5##NM_033512|TSPYL5|85453|TSPY-like 5##AK091445|TSPYL5|85453|TSPY-like 5	0.207737	CTCF.p2:-11:0.208
chr10	95681226	95681346	reg1018405.p2	7.141	+	TSC_hg19_v1_chr10_+_95653753 AK091309 AX746907 NM_001134658 NM_153226 BC036382 BC058549 BC143283 BC143284 BC104814 BC047102	-27546	+	NM_005097 BC022500 AF055636 AF473548 AK309416 AY358885 AK303956	-163640	+	TSC_hg19_v1_chr10_-_95462320 AJ431721 AJ431722 AJ431723 AJ431724 AJ431725 AK090955 AX746703 NM_145246	-218951	-	TSC_hg19_v1_chr10_+_95753696 AB040949 BC151854 NM_016341	72428	+	AK297779 AK289852 NM_001165979 AF170071	167545	+	AB077992 TSC_hg19_v1_chr10_-_96122697 BC049850 NM_022451 AK091246 AX746873 BC030999 AK292520	441390	-	AK091309|SLC35G1|159371|solute carrier family 35, member G1##NM_001134658|SLC35G1|159371|solute carrier family 35, member G1##NM_153226|SLC35G1|159371|solute carrier family 35, member G1##BC036382|SLC35G1|159371|solute carrier family 35, member G1##BC143284|SLC35G1|159371|solute carrier family 35, member G1##BC104814|SLC35G1|159371|solute carrier family 35, member G1##BC047102|SLC35G1|159371|solute carrier family 35, member G1##NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1##BC022500|LGI1|9211|leucine-rich, glioma inactivated 1##AF055636|LGI1|9211|leucine-rich, glioma inactivated 1##AF473548|LGI1|9211|leucine-rich, glioma inactivated 1##AK309416|LGI1|9211|leucine-rich, glioma inactivated 1##AY358885|LGI1|9211|leucine-rich, glioma inactivated 1##AK303956|LGI1|9211|leucine-rich, glioma inactivated 1##AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AB040949|PLCE1|51196|phospholipase C, epsilon 1##BC151854|PLCE1|51196|phospholipase C, epsilon 1##NM_016341|PLCE1|51196|phospholipase C, epsilon 1##AK297779|PLCE1|51196|phospholipase C, epsilon 1##AK289852|PLCE1|51196|phospholipase C, epsilon 1##NM_001165979|PLCE1|51196|phospholipase C, epsilon 1##AF170071|PLCE1|51196|phospholipase C, epsilon 1##AB077992|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##BC049850|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##NM_022451|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##AK091246|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##BC030999|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##AK292520|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)	1.342333	CTCF.p2:11:0.886	CTCF.p2:-76:0.456
chr11	72145295	72145431	reg1017200.p1	7.141	+	TSC_hg19_v1_chr11_-_71955221 AK290645 NM_005169	-190128	-	BC041564 TSC_hg19_v1_chr11_-_71955201	-190161	-	Y14385 BC140853 NM_001567	-209511	+	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	92	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	213	-	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	287	-	AK290645|PHOX2A|401|paired-like homeobox 2a##NM_005169|PHOX2A|401|paired-like homeobox 2a##BC041564|PHOX2A|401|paired-like homeobox 2a##Y14385|INPPL1|3636|inositol polyphosphate phosphatase-like 1##BC140853|INPPL1|3636|inositol polyphosphate phosphatase-like 1##NM_001567|INPPL1|3636|inositol polyphosphate phosphatase-like 1##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)	1.981113	CTCF.p2:0:0.989	CTCF.p2:-54:0.992
chr2	228804396	228804507	reg1017232.p2	7.141	+	AK097409 NM_178821 BC036377 AK098821 AK301861	-68099	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	-125860	+	AF271633 BC032014 AK301490 AF283317 AK312464 NM_025243	-221730	-	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	241911	-	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	1331554	-	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	1774797	-	AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AF271633|SLC19A3|80704|solute carrier family 19, member 3##BC032014|SLC19A3|80704|solute carrier family 19, member 3##AK301490|SLC19A3|80704|solute carrier family 19, member 3##AF283317|SLC19A3|80704|solute carrier family 19, member 3##AK312464|SLC19A3|80704|solute carrier family 19, member 3##NM_025243|SLC19A3|80704|solute carrier family 19, member 3##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing	0.262123	CTCF.p2:-10:0.262
chr3	185451804	185451936	reg1021483.p1	7.141	+	AK304402 TSC_hg19_v1_chr3_+_185304106 AF151697 NM_021627 AK296772 AK027599 AK296744 BC040609 CU691906 AB037752 AB385449 AL834380	-147787	+	CU687970 TSC_hg19_v1_chr3_-_185270374 AK298380 AY036912 AY093498 EF186228 EF186229 BC064941 AK122651 NM_139248	-181542	-	TSC_hg19_v1_chr3_-_185216824 EU831805 EU831882 AK313954 BC019884 BC008043 BX647928 AY358547 AK172748 AK290878 NM_080652	-235171	-	CU676908 DQ892161 EU176689 TSC_hg19_v1_chr3_-_185542803 AK309611 AF117107 BC012322	90904	-	TSC_hg19_v1_chr3_-_185542828 BC021290 AK290664 NM_001007225 NM_006548	90961	-	AK091863 TSC_hg19_v1_chr3_-_185641735	189795	-	AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK298380|LIPH|200879|lipase, member H##AY036912|LIPH|200879|lipase, member H##AY093498|LIPH|200879|lipase, member H##EF186228|LIPH|200879|lipase, member H##EF186229|LIPH|200879|lipase, member H##BC064941|LIPH|200879|lipase, member H##AK122651|LIPH|200879|lipase, member H##NM_139248|LIPH|200879|lipase, member H##EU831805|TMEM41A|90407|transmembrane protein 41A##EU831882|TMEM41A|90407|transmembrane protein 41A##AK313954|TMEM41A|90407|transmembrane protein 41A##BC019884|TMEM41A|90407|transmembrane protein 41A##BC008043|TMEM41A|90407|transmembrane protein 41A##BX647928|TMEM41A|90407|transmembrane protein 41A##AY358547|TMEM41A|90407|transmembrane protein 41A##AK172748|TMEM41A|90407|transmembrane protein 41A##AK290878|TMEM41A|90407|transmembrane protein 41A##NM_080652|TMEM41A|90407|transmembrane protein 41A##DQ892161|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##EU176689|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK309611|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AF117107|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##BC021290|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK290664|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##NM_001007225|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##NM_006548|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK091863|TRA2B|6434|transformer 2 beta homolog (Drosophila)	0.955871	CTCF.p2:-3:0.956
chr6	41007176	41007310	reg1022962.p1	7.141	+	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	-294	-	BC142616 AB033072 NM_020737 AK291474	-452099	-	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-1105029	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	3103	+	AK223461 AK308197 AK310006 AK313288 NM_006789 BC047767 AF161698 BC069688 BC069764 AK300689	13756	+	TSC_hg19_v1_chr6_-_41040208 BC011709 NM_145063 AK290939 AK310688 AK313361 BC021579 AJ420538	33014	-	BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2##AK223461|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK308197|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK310006|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK313288|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##NM_006789|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC047767|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AF161698|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069688|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069764|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK300689|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC011709|C6orf130|221443|chromosome 6 open reading frame 130##NM_145063|C6orf130|221443|chromosome 6 open reading frame 130##AK290939|C6orf130|221443|chromosome 6 open reading frame 130##AK310688|C6orf130|221443|chromosome 6 open reading frame 130##AK313361|C6orf130|221443|chromosome 6 open reading frame 130##BC021579|C6orf130|221443|chromosome 6 open reading frame 130##AJ420538|C6orf130|221443|chromosome 6 open reading frame 130	0.999532	CTCF.p2:0:1.000
chr1	110466167	110466234	reg1025003.p2	7.140	+	BC021117 TSC_hg19_v1_chr1_+_110453470 AK291660 M37435 M27087 U22386 AB527768 M64592	-12650	+	NM_000757 NM_172210 NM_172212	-12968	+	AY074930 TSC_hg19_v1_chr1_-_110306546 AK307932 AK310979 AK308196 AK025175 AK225235 BC012926 AK292198 AK290261 NM_024526 NM_133181 NM_139053	-159616	-	AF315687 TSC_hg19_v1_chr1_+_110527316	61111	+	TSC_hg19_v1_chr1_+_110527386 BC111563 NM_001242673 NM_006621 BC065254	61161	+	BC010681 TSC_hg19_v1_chr1_+_110527405	61202	+	BC021117|CSF1|1435|colony stimulating factor 1 (macrophage)##AK291660|CSF1|1435|colony stimulating factor 1 (macrophage)##M37435|CSF1|1435|colony stimulating factor 1 (macrophage)##M27087|CSF1|1435|colony stimulating factor 1 (macrophage)##U22386|CSF1|1435|colony stimulating factor 1 (macrophage)##M64592|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_000757|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172210|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172212|CSF1|1435|colony stimulating factor 1 (macrophage)##AY074930|EPS8L3|79574|EPS8-like 3##AK307932|EPS8L3|79574|EPS8-like 3##AK310979|EPS8L3|79574|EPS8-like 3##AK308196|EPS8L3|79574|EPS8-like 3##AK025175|EPS8L3|79574|EPS8-like 3##AK225235|EPS8L3|79574|EPS8-like 3##BC012926|EPS8L3|79574|EPS8-like 3##AK292198|EPS8L3|79574|EPS8-like 3##AK290261|EPS8L3|79574|EPS8-like 3##NM_024526|EPS8L3|79574|EPS8-like 3##NM_133181|EPS8L3|79574|EPS8-like 3##NM_139053|EPS8L3|79574|EPS8-like 3##AF315687|AHCYL1|10768|adenosylhomocysteinase-like 1##BC111563|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_001242673|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_006621|AHCYL1|10768|adenosylhomocysteinase-like 1##BC065254|AHCYL1|10768|adenosylhomocysteinase-like 1##BC010681|AHCYL1|10768|adenosylhomocysteinase-like 1	0.991026	CTCF.p2:30:0.991
chr12	128162191	128162310	reg1021641.p1	7.140	+	NM_052907	-2351089	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-2612182	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-2612309	+	NM_001136103	589697	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	1146193	-	BC043528 TSC_hg19_v1_chr12_+_129337985	1175734	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.998682	CTCF.p2:17:0.999
chr1	230933751	230933863	reg1017436.p1	7.140	+	AF022799 NM_006615 AK313629 AB038463 NM_016452 BC027993 AK298024	-50648	+	NM_000029	-83472	-	TSC_hg19_v1_chr1_-_230849965 AK312291	-83838	-	AK292433 NM_001136495	57974	-	AL713769 TSC_hg19_v1_chr1_-_231004090	70263	-	TSC_hg19_v1_chr1_-_231004271 AK027431 BC066649 NM_032800	70459	-	AF022799|CAPN9|10753|calpain 9##NM_006615|CAPN9|10753|calpain 9##AK313629|CAPN9|10753|calpain 9##AB038463|CAPN9|10753|calpain 9##NM_016452|CAPN9|10753|calpain 9##BC027993|CAPN9|10753|calpain 9##AK298024|CAPN9|10753|calpain 9##NM_000029|AGT|183|angiotensinogen (serpin peptidase inhibitor, clade A, member 8)##AK312291|AGT|183|angiotensinogen (serpin peptidase inhibitor, clade A, member 8)##AK292433|C1orf198|84886|chromosome 1 open reading frame 198##NM_001136495|C1orf198|84886|chromosome 1 open reading frame 198##AL713769|C1orf198|84886|chromosome 1 open reading frame 198##AK027431|C1orf198|84886|chromosome 1 open reading frame 198##BC066649|C1orf198|84886|chromosome 1 open reading frame 198##NM_032800|C1orf198|84886|chromosome 1 open reading frame 198	0.983302	CTCF.p2:-11:0.983
chr20	34051669	34051794	reg1018964.p1	7.140	+	TSC_hg19_v1_chr20_+_34042987 AK307861 AB621828 AF049105 NM_007186	-8657	+	AB593125 U13660 NM_000557	-25741	-	TSC_hg19_v1_chr20_-_33999791 AK225281 AK293149 BC119013 BC122862 AY050659 NM_001184977 NM_018244 NM_199487	-51869	-	AK058089 AK310337 NM_001145350	65732	-	NM_015966 NM_198398 TSC_hg19_v1_chr20_+_34129827 AF308298 AF077030 AF151812 EF206690 BC014014	78071	+	AK074550 BC009765 TSC_hg19_v1_chr20_+_34129829 AK096484 AK300916	78099	+	AK307861|CEP250|11190|centrosomal protein 250kDa##AF049105|CEP250|11190|centrosomal protein 250kDa##NM_007186|CEP250|11190|centrosomal protein 250kDa##AB593125|GDF5|8200|growth differentiation factor 5##U13660|GDF5|8200|growth differentiation factor 5##NM_000557|GDF5|8200|growth differentiation factor 5##AK225281|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293149|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC119013|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC122862|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AY050659|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_001184977|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_018244|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_199487|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK058089|C20orf173|140873|chromosome 20 open reading frame 173##AK310337|C20orf173|140873|chromosome 20 open reading frame 173##NM_001145350|C20orf173|140873|chromosome 20 open reading frame 173##NM_015966|ERGIC3|51614|ERGIC and golgi 3##NM_198398|ERGIC3|51614|ERGIC and golgi 3##AF308298|ERGIC3|51614|ERGIC and golgi 3##AF077030|ERGIC3|51614|ERGIC and golgi 3##AF151812|ERGIC3|51614|ERGIC and golgi 3##EF206690|ERGIC3|51614|ERGIC and golgi 3##BC014014|ERGIC3|51614|ERGIC and golgi 3##AK074550|ERGIC3|51614|ERGIC and golgi 3##BC009765|ERGIC3|51614|ERGIC and golgi 3##AK096484|ERGIC3|51614|ERGIC and golgi 3##AK300916|ERGIC3|51614|ERGIC and golgi 3	0.937495	CTCF.p2:-4:0.937
chr2	241496297	241496409	reg1020751.p1	7.140	+	AK125881 TSC_hg19_v1_chr2_-_241495084	-1323	-	TSC_hg19_v1_chr2_+_241375269 AK223516 BC045712	-121088	+	TSC_hg19_v1_chr2_+_241375207 BC027997	-121142	+	AB034636 BC073146 BC036111 TSC_hg19_v1_chr2_-_241497400	1030	-	AK000506 AK225534 NM_016552 NM_017844 TSC_hg19_v1_chr2_-_241497404	1051	-	TSC_hg19_v1_chr2_-_241497413 AK314534 BC033495	1072	-	AK125881|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK223516|GPC1|2817|glypican 1##BC045712|GPC1|2817|glypican 1##BC027997|GPC1|2817|glypican 1##AB034636|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##BC073146|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##BC036111|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK000506|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK225534|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_016552|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_017844|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK314534|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##BC033495|ANKMY1|51281|ankyrin repeat and MYND domain containing 1	0.294167	CTCF.p2:9:0.294
chr3	42589054	42589177	reg1020983.p1	7.140	+	TSC_hg19_v1_chr3_+_42544134 AK298115 AK314334 L13288 BC064424 X75299 AB590664 EF577396	-44936	+	TSC_hg19_v1_chr3_+_42544108 AK294609 NM_001251883 NM_001251884 NM_001251885 NM_004624 AK293548	-45008	+	AK056819 NM_001251882	-58325	+	TSC_hg19_v1_chr3_-_42623460 BC006178 BC018437 AY359041 AK292856 AK293133 AK074576 NM_001201584 NM_004206 NM_032970	34346	-	NM_016305 AF201950 TSC_hg19_v1_chr3_+_42632337	43202	+	TSC_hg19_v1_chr3_+_42632351 BC017804 AK312225 DQ891965 EU176663 BC020444	43264	+	AK298115|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK314334|VIPR1|7433|vasoactive intestinal peptide receptor 1##L13288|VIPR1|7433|vasoactive intestinal peptide receptor 1##BC064424|VIPR1|7433|vasoactive intestinal peptide receptor 1##X75299|VIPR1|7433|vasoactive intestinal peptide receptor 1##EF577396|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK294609|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251883|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251884|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251885|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_004624|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK293548|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK056819|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251882|VIPR1|7433|vasoactive intestinal peptide receptor 1##BC006178|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##BC018437|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AY359041|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK292856|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK293133|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK074576|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_001201584|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_004206|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_032970|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_016305|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##AF201950|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##BC017804|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##AK312225|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##DQ891965|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##EU176663|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##BC020444|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2	0.999758	CTCF.p2:-7:1.000
chr1	180157431	180157561	reg1019099.p1	7.139	+	TSC_hg19_v1_chr1_+_180124047 AB384905	-33440	+	AF361868 TSC_hg19_v1_chr1_+_180124032 L42379	-33464	+	AB209280 BC100023 TSC_hg19_v1_chr1_+_180124023 BC017692	-33470	+	NM_033343 AF179849	41940	+	TSC_hg19_v1_chr1_-_180471976 AK314112 NM_032360	314468	-	TSC_hg19_v1_chr1_+_180601151 BC028576 NM_001135669 NM_004736	443641	+	AF361868|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##L42379|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##AB209280|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##BC100023|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##BC017692|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##NM_033343|LHX4|89884|LIM homeobox 4##AF179849|LHX4|89884|LIM homeobox 4##AK314112|ACBD6|84320|acyl-CoA binding domain containing 6##NM_032360|ACBD6|84320|acyl-CoA binding domain containing 6##BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	0.070468	
chrX	49526231	49526322	reg1018766.p1	7.139	+	BC004861 AF058989 NM_003785	-65695	-	NM_001040663 NM_001468 BC005363 BC036094 BC069470	-162637	+	NM_001127212 U19143 BC069309 BC069397 BC069558 U19142	-172135	+	NM_007003 AK312039 AF275258 AJ005894 AK092503 AX747575	67651	+	NM_001145073	118193	+	TSC_hg19_v1_chrX_+_49687274 AK092049 NM_001127898 NM_001127899 AK056560	160970	+	BC004861|PAGE1|8712|P antigen family, member 1 (prostate associated)##AF058989|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_003785|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_001040663|GAGE1|2543|G antigen 1##NM_001468|GAGE1|2543|G antigen 1##BC005363|GAGE1|2543|G antigen 1##BC036094|GAGE1|2543|G antigen 1##BC069470|GAGE1|2543|G antigen 1##NM_001127212|GAGE2A|729447|G antigen 2A##U19143|GAGE2C|2574|G antigen 2C##BC069309|GAGE2A|729447|G antigen 2A##BC069397|GAGE2A|729447|G antigen 2A##BC069558|GAGE2A|729447|G antigen 2A##U19142|GAGE1|2543|G antigen 1##NM_007003|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK312039|PAGE4|9506|P antigen family, member 4 (prostate associated)##AF275258|PAGE4|9506|P antigen family, member 4 (prostate associated)##AJ005894|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK092503|PAGE4|9506|P antigen family, member 4 (prostate associated)##NM_001145073|USP27X|389856|ubiquitin specific peptidase 27, X-linked##AK092049|CLCN5|1184|chloride channel 5##NM_001127898|CLCN5|1184|chloride channel 5##NM_001127899|CLCN5|1184|chloride channel 5##AK056560|CLCN5|1184|chloride channel 5	0.0	
chr18	11741664	11741781	reg1018944.p2	7.138	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	-52510	+	NM_022068	-592962	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-1215625	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	9793	+	L10665 TSC_hg19_v1_chr18_+_11752245	10493	+	NM_020412 TSC_hg19_v1_chr18_+_11851412 AK314068 BC065933 BC012733 AF281064 CU680382	109727	+	NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_020412|CHMP1B|57132|charged multivesicular body protein 1B##AK314068|CHMP1B|57132|charged multivesicular body protein 1B##BC065933|CHMP1B|57132|charged multivesicular body protein 1B##BC012733|CHMP1B|57132|charged multivesicular body protein 1B##AF281064|CHMP1B|57132|charged multivesicular body protein 1B	0.193327	
chr19	12075440	12075620	reg1008463.p3	7.138	+	TSC_hg19_v1_chr19_+_12035889 AK299182 AK308305 AL136732 NM_144566 BC144406 BC136777	-39612	+	TSC_hg19_v1_chr19_+_11998643 BC051309 NM_021915 EU446913	-76857	+	AL833935 NM_152262	-98687	+	AK092240 AK299224 AX747424 NM_001012753 BC105711 BC105712 BC105713	352	+	TSC_hg19_v1_chr19_-_12146492 AK129553 BC047412	70959	-	TSC_hg19_v1_chr19_-_12146530 AK098300 NM_001080411	71011	-	AK299182|ZNF763|284390|zinc finger protein 763##AK308305|ZNF700|90592|zinc finger protein 700##AL136732|ZNF700|90592|zinc finger protein 700##NM_144566|ZNF700|90592|zinc finger protein 700##BC144406|ZNF700|90592|zinc finger protein 700##BC136777|ZNF700|90592|zinc finger protein 700##BC051309|ZNF69|7620|zinc finger protein 69##NM_021915|ZNF69|7620|zinc finger protein 69##EU446913|ZNF69|7620|zinc finger protein 69##AL833935|ZNF439|90594|zinc finger protein 439##NM_152262|ZNF439|90594|zinc finger protein 439##AK092240|ZNF763|284390|zinc finger protein 763##AK299224|ZNF763|284390|zinc finger protein 763##NM_001012753|ZNF763|284390|zinc finger protein 763##BC105711|ZNF763|284390|zinc finger protein 763##BC105712|ZNF763|284390|zinc finger protein 763##BC105713|ZNF763|284390|zinc finger protein 763##BC047412|ZNF433|163059|zinc finger protein 433##AK098300|ZNF433|163059|zinc finger protein 433##NM_001080411|ZNF433|163059|zinc finger protein 433	0.659974	CTCF.p2:-24:0.660
chr22	24204428	24204552	reg1022454.p1	7.138	+	NM_001024939 TSC_hg19_v1_chr22_+_24200061 AK304409 AK308589 AK316049 CR456373 AB463269 CU013078 CU013366	-4377	+	AF443201 AJ271290 NM_001024938 NM_030807 AK314502 AK315937 AK075467 AK296169 AK308602 BC063525 BC100807 BC100808 BC100809 BC100810 AK300196 TSC_hg19_v1_chr22_+_24199338	-5292	+	AB528119 CU013077 CU013365 CU691264 TSC_hg19_v1_chr22_-_24181194 AK096976 AK125830 BC057830 CR456372 AL389876 NM_001002862 NM_001135751 NM_198440	-23305	-	TSC_hg19_v1_chr22_+_24236567 BC022414 NM_002415 BC013976	32071	+	AK311929 TSC_hg19_v1_chr22_+_24236569	32081	+	EF611126 TSC_hg19_v1_chr22_+_24236575	32086	+	NM_001024939|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK304409|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK308589|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK316049|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##CR456373|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##CU013078|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##CU013366|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AF443201|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AJ271290|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##NM_001024938|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##NM_030807|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK314502|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK315937|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK075467|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK296169|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK308602|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC063525|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC100807|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC100808|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC100809|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##BC100810|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##AK300196|SLC2A11|66035|solute carrier family 2 (facilitated glucose transporter), member 11##CU013077|DERL3|91319|Der1-like domain family, member 3##CU013365|DERL3|91319|Der1-like domain family, member 3##AK096976|DERL3|91319|Der1-like domain family, member 3##AK125830|DERL3|91319|Der1-like domain family, member 3##BC057830|DERL3|91319|Der1-like domain family, member 3##CR456372|DERL3|91319|Der1-like domain family, member 3##AL389876|DERL3|91319|Der1-like domain family, member 3##NM_001002862|DERL3|91319|Der1-like domain family, member 3##NM_001135751|DERL3|91319|Der1-like domain family, member 3##NM_198440|DERL3|91319|Der1-like domain family, member 3##BC022414|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##NM_002415|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC013976|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##AK311929|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)	0.977868	CTCF.p2:-8:0.978
chr5	88639643	88639823	reg1016801.p2	7.138	+	AL833268 AL833274 NM_001131005 NM_001193347	-439839	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-454469	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-454613	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	1065806	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1130449	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1130845	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr8	142171122	142171232	reg1018809.p1	7.138	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-32440	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-159921	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-525553	-	AK128212 NM_001080431	67495	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	93013	-	NM_005293	206187	-	NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.879407	CTCF.p2:10:0.879
chr1	216923514	216923621	reg1019952.p1	7.137	+	HQ692853 AF117255 BC008218 AY388456 AK291647 TSC_hg19_v1_chr1_-_216896791 AB020639 AK290945 BC064700 NM_001243515 NM_001243518 NM_001243519 NM_001438	-26841	-	AF055580 AY481573 NM_007123 NM_206933	-326830	-	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	-1182704	+	AY388461 NM_001243514	55141	-	AY388459 AY388458 NM_001243512 NM_001243513 AY388457 AY388460 NM_001243510 NM_001243511	189444	-	AB362218 AK131193 NM_001243507 NM_001243509	326703	-	HQ692853|ESRRG|2104|estrogen-related receptor gamma##AF117255|ESRRG|2104|estrogen-related receptor gamma##BC008218|ESRRG|2104|estrogen-related receptor gamma##AY388456|ESRRG|2104|estrogen-related receptor gamma##AK291647|ESRRG|2104|estrogen-related receptor gamma##AB020639|ESRRG|2104|estrogen-related receptor gamma##AK290945|ESRRG|2104|estrogen-related receptor gamma##BC064700|ESRRG|2104|estrogen-related receptor gamma##NM_001243515|ESRRG|2104|estrogen-related receptor gamma##NM_001243518|ESRRG|2104|estrogen-related receptor gamma##NM_001243519|ESRRG|2104|estrogen-related receptor gamma##NM_001438|ESRRG|2104|estrogen-related receptor gamma##AF055580|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##AY481573|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_007123|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_206933|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3##AY388461|ESRRG|2104|estrogen-related receptor gamma##NM_001243514|ESRRG|2104|estrogen-related receptor gamma##AY388459|ESRRG|2104|estrogen-related receptor gamma##AY388458|ESRRG|2104|estrogen-related receptor gamma##NM_001243512|ESRRG|2104|estrogen-related receptor gamma##NM_001243513|ESRRG|2104|estrogen-related receptor gamma##AY388457|ESRRG|2104|estrogen-related receptor gamma##AY388460|ESRRG|2104|estrogen-related receptor gamma##NM_001243510|ESRRG|2104|estrogen-related receptor gamma##NM_001243511|ESRRG|2104|estrogen-related receptor gamma##AB362218|ESRRG|2104|estrogen-related receptor gamma##AK131193|ESRRG|2104|estrogen-related receptor gamma##NM_001243507|ESRRG|2104|estrogen-related receptor gamma##NM_001243509|ESRRG|2104|estrogen-related receptor gamma	0.771709	CTCF.p2:-10:0.772
chr1	26362562	26362700	reg1023758.p1	7.137	+	TSC_hg19_v1_chr1_+_26348308 BC065528	-14265	+	TSC_hg19_v1_chr1_+_26348265 NM_004455 U67191	-14364	+	BC001158 U89386 TSC_hg19_v1_chr1_-_26324541 AK313815 D87845 NM_000437	-38041	-	AK094027 AX748418 AF370409 BC006251 NM_001004434 NM_032513	9892	-	BT007373 BC080529 AF353673 BC015717 AJ276484 AK056942 AK297820 NM_032588 TSC_hg19_v1_chr1_-_26394122	31422	-	NM_001243532	75024	+	BC065528|EXTL1|2134|exostoses (multiple)-like 1##NM_004455|EXTL1|2134|exostoses (multiple)-like 1##U67191|EXTL1|2134|exostoses (multiple)-like 1##BC001158|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa##U89386|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa##AK313815|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa##D87845|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa##NM_000437|PAFAH2|5051|platelet-activating factor acetylhydrolase 2, 40kDa##AK094027|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##AF370409|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##BC006251|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##NM_001004434|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##NM_032513|SLC30A2|7780|solute carrier family 30 (zinc transporter), member 2##BT007373|TRIM63|84676|tripartite motif containing 63##BC080529|TRIM63|84676|tripartite motif containing 63##AF353673|TRIM63|84676|tripartite motif containing 63##AJ276484|TRIM63|84676|tripartite motif containing 63##AK056942|TRIM63|84676|tripartite motif containing 63##AK297820|TRIM63|84676|tripartite motif containing 63##NM_032588|TRIM63|84676|tripartite motif containing 63##NM_001243532|PDIK1L|149420|PDLIM1 interacting kinase 1 like	0.97324	CTCF.p2:-4:0.973
chr12	83783168	83783314	reg1022301.p1	7.137	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	-701980	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	-702324	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	-702541	+	AK291207 AK022853 TSC_hg19_v1_chr12_-_85306547	1523302	-	TSC_hg19_v1_chr12_-_85306575 BC022253 BC070040	1523331	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	1523351	-	AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK291207|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK022853|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC022253|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC070040|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15	0.760725	CTCF.p2:28:0.761
chr8	28602702	28602818	reg1019963.p1	7.137	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	-43610	+	TSC_hg19_v1_chr8_+_28559032 AB011091	-43685	+	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	-250995	+	TSC_hg19_v1_chr8_-_28747454 BC016687 AK225072 AK304525 AK298468 NM_001172562 BC025267 AK300593 AK295977 AK001733 AK225530	144700	-	NM_001145159 NM_018250	144937	-	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	145157	+	AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3##AB011091|EXTL3|2137|exostoses (multiple)-like 3##NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##BC016687|INTS9|55756|integrator complex subunit 9##AK225072|INTS9|55756|integrator complex subunit 9##AK304525|INTS9|55756|integrator complex subunit 9##AK298468|INTS9|55756|integrator complex subunit 9##NM_001172562|INTS9|55756|integrator complex subunit 9##BC025267|INTS9|55756|integrator complex subunit 9##AK300593|INTS9|55756|integrator complex subunit 9##AK295977|INTS9|55756|integrator complex subunit 9##AK001733|INTS9|55756|integrator complex subunit 9##AK225530|INTS9|55756|integrator complex subunit 9##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1	0.970488	CTCF.p2:-5:0.970
chr15	53489637	53489744	reg1018272.p1	7.135	+	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-407496	-	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	-518809	-	TSC_hg19_v1_chr15_-_52861344 BC100015 AL833077	-628313	-	AK096055 BX537884 NM_182758	562157	-	NM_001080534	815410	+	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	1999402	-	BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##BC100015|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AL833077|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1	0.0	
chr19	17416305	17416422	reg1019538.p1	7.135	+	BC020173 BC039087 TSC_hg19_v1_chr19_-_17414209 BC007895 AK225140 AK315366 AK021805 AK225340 AK298251 NM_024527	-2181	-	AK303628 NM_152363	-23910	+	TSC_hg19_v1_chr19_+_17378266 AK000578 BC091491 BC000788	-38069	+	BC021801 NM_023937 TSC_hg19_v1_chr19_+_17416677 AB049652 BC000071	228	+	TSC_hg19_v1_chr19_+_17420345 NM_024050	3918	+	TSC_hg19_v1_chr19_+_17420358 AY563006 DQ090952 BC000615	3995	+	BC020173|ABHD8|79575|abhydrolase domain containing 8##BC039087|ABHD8|79575|abhydrolase domain containing 8##BC007895|ABHD8|79575|abhydrolase domain containing 8##AK225140|ABHD8|79575|abhydrolase domain containing 8##AK315366|ABHD8|79575|abhydrolase domain containing 8##AK021805|ABHD8|79575|abhydrolase domain containing 8##AK225340|ABHD8|79575|abhydrolase domain containing 8##AK298251|ABHD8|79575|abhydrolase domain containing 8##NM_024527|ABHD8|79575|abhydrolase domain containing 8##AK303628|ANKLE1|126549|ankyrin repeat and LEM domain containing 1##NM_152363|ANKLE1|126549|ankyrin repeat and LEM domain containing 1##AK000578|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC091491|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC000788|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC021801|MRPL34|64981|mitochondrial ribosomal protein L34##NM_023937|MRPL34|64981|mitochondrial ribosomal protein L34##AB049652|MRPL34|64981|mitochondrial ribosomal protein L34##BC000071|MRPL34|64981|mitochondrial ribosomal protein L34##NM_024050|DDA1|79016|DET1 and DDB1 associated 1##AY563006|DDA1|79016|DET1 and DDB1 associated 1##DQ090952|DDA1|79016|DET1 and DDB1 associated 1##BC000615|DDA1|79016|DET1 and DDB1 associated 1	0.9546	CTCF.p2:17:0.955
chr6	153274412	153274519	reg1020246.p2	7.135	+	AK313950 BC009794 NM_003381 NM_194435 AK291959 M36634	-202479	+	NM_025107 AF527367 AK024922 BC128463 BC128464 GU997693 AK021612 BC022556 AL834500 CU692694	-255360	+	AF495910 NM_182961	-315932	-	AY079515 DQ891922 DQ895106 BC018905 AF129535 TSC_hg19_v1_chr6_-_153304175 AK026197 AK314456 NM_012177	29682	-	AJ420499 TSC_hg19_v1_chr6_-_153304715 AK055221 NM_001142522	30199	-	TSC_hg19_v1_chr6_-_153323825 AK027684 CU676987 CU680090 AK001037 AK225321 AK225970 AK290662 BC014428	49347	-	AK313950|VIP|7432|vasoactive intestinal peptide##BC009794|VIP|7432|vasoactive intestinal peptide##NM_003381|VIP|7432|vasoactive intestinal peptide##NM_194435|VIP|7432|vasoactive intestinal peptide##AK291959|VIP|7432|vasoactive intestinal peptide##M36634|VIP|7432|vasoactive intestinal peptide##NM_025107|MYCT1|80177|myc target 1##AF527367|MYCT1|80177|myc target 1##AK024922|MYCT1|80177|myc target 1##BC128463|MYCT1|80177|myc target 1##BC128464|MYCT1|80177|myc target 1##GU997693|MYCT1|80177|myc target 1##AK021612|MYCT1|80177|myc target 1##BC022556|MYCT1|80177|myc target 1##AL834500|MYCT1|80177|myc target 1##AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AY079515|FBXO5|26271|F-box protein 5##DQ891922|FBXO5|26271|F-box protein 5##DQ895106|FBXO5|26271|F-box protein 5##BC018905|FBXO5|26271|F-box protein 5##AF129535|FBXO5|26271|F-box protein 5##AK026197|FBXO5|26271|F-box protein 5##AK314456|FBXO5|26271|F-box protein 5##NM_012177|FBXO5|26271|F-box protein 5##AJ420499|FBXO5|26271|F-box protein 5##AK055221|FBXO5|26271|F-box protein 5##NM_001142522|FBXO5|26271|F-box protein 5##AK027684|MTRF1L|54516|mitochondrial translational release factor 1-like##AK225321|MTRF1L|54516|mitochondrial translational release factor 1-like##AK225970|MTRF1L|54516|mitochondrial translational release factor 1-like##AK290662|MTRF1L|54516|mitochondrial translational release factor 1-like##BC014428|MTRF1L|54516|mitochondrial translational release factor 1-like	0.927106	CTCF.p2:3:0.927
chr7	115320094	115320200	reg1018933.p2	7.135	+	BC040713 TSC_hg19_v1_chr7_+_114562979 AY196485	-757191	+	TSC_hg19_v1_chr7_+_114562148 AF054589 NM_001166345 NM_001166346 NM_199072	-757973	+	AF467253 NM_001172767 NM_148899 U80741 AF467258 AF467259 TSC_hg19_v1_chr7_+_114066703	-1253517	+	AJ608795 NM_001244583	288219	-	TSC_hg19_v1_chr7_-_115670796 D43945 BC029891	350639	-	TSC_hg19_v1_chr7_-_115670820 AK313546	350671	-	BC040713|MDFIC|29969|MyoD family inhibitor domain containing##AY196485|MDFIC|29969|MyoD family inhibitor domain containing##AF054589|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166345|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166346|MDFIC|29969|MyoD family inhibitor domain containing##NM_199072|MDFIC|29969|MyoD family inhibitor domain containing##AF467253|FOXP2|93986|forkhead box P2##NM_001172767|FOXP2|93986|forkhead box P2##NM_148899|FOXP2|93986|forkhead box P2##AF467258|FOXP2|93986|forkhead box P2##AF467259|FOXP2|93986|forkhead box P2##AJ608795|TFEC|22797|transcription factor EC##NM_001244583|TFEC|22797|transcription factor EC##D43945|TFEC|22797|transcription factor EC##BC029891|TFEC|22797|transcription factor EC##AK313546|TFEC|22797|transcription factor EC	0.772093	CTCF.p2:12:0.772
chr10	48377913	48378019	reg1020537.p2	7.134	+	TSC_hg19_v1_chr10_+_48355056 AK056666 BC051323 NM_153034 BC026895	-22915	+	AK298761 NM_001040084 BC073755 AK096715 Z36830 AK296976 BC004376 NM_001098845 X16662 BC029890 AK300158 AK223149 AK296573 AK300139 M81844 AB590156 CU687256 DQ893430 DQ896775	-122641	+	BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556 BC146955 BC146968	-130302	+	J03912 CU691778 BC039844 AB593121 M22453 NM_002900 DQ426897	12969	-	EU446620 EU446952 BC074921 BC069643 TSC_hg19_v1_chr10_-_48416877 AF188285 NM_016204 AK314956	38820	-	D49492 AK315322 AK310360 BC028237 NM_004962 TSC_hg19_v1_chr10_-_48439183	61113	-	AK056666|ZNF488|118738|zinc finger protein 488##BC051323|ZNF488|118738|zinc finger protein 488##NM_153034|ZNF488|118738|zinc finger protein 488##BC026895|ZNF488|118738|zinc finger protein 488##AK298761|ANXA8|653145|annexin A8##NM_001040084|ANXA8|653145|annexin A8##BC073755|ANXA8|653145|annexin A8##Z36830|ANXA8|653145|annexin A8##BC004376|ANXA8|653145|annexin A8##NM_001098845|ANXA8L1|728113|annexin A8-like 1##X16662|ANXA8L2|244|annexin A8-like 2##AK300158|ANXA8|653145|annexin A8##AK223149|ANXA8L2|244|annexin A8-like 2##AK296573|ANXA8|653145|annexin A8##AK300139|ANXA8|653145|annexin A8##M81844|ANXA8|653145|annexin A8##DQ893430|ANXA8L2|244|annexin A8-like 2##DQ896775|ANXA8|653145|annexin A8##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##J03912|RBP3|5949|retinol binding protein 3, interstitial##BC039844|RBP3|5949|retinol binding protein 3, interstitial##AB593121|RBP3|5949|retinol binding protein 3, interstitial##M22453|RBP3|5949|retinol binding protein 3, interstitial##NM_002900|RBP3|5949|retinol binding protein 3, interstitial##EU446620|GDF2|2658|growth differentiation factor 2##EU446952|GDF2|2658|growth differentiation factor 2##BC074921|GDF2|2658|growth differentiation factor 2##BC069643|GDF2|2658|growth differentiation factor 2##AF188285|GDF2|2658|growth differentiation factor 2##NM_016204|GDF2|2658|growth differentiation factor 2##AK314956|GDF2|2658|growth differentiation factor 2##D49492|GDF10|2662|growth differentiation factor 10##AK315322|GDF10|2662|growth differentiation factor 10##AK310360|GDF10|2662|growth differentiation factor 10##BC028237|GDF10|2662|growth differentiation factor 10##NM_004962|GDF10|2662|growth differentiation factor 10	0.998366	CTCF.p2:3:0.998
chr16	13529860	13530006	reg1019114.p1	7.134	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-534465	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-632214	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-632282	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	484098	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	635153	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	750585	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.932153	CTCF.p2:-3:0.932
chr1	68231934	68232061	reg1017275.p1	7.134	+	TSC_hg19_v1_chr1_+_68151094 AB463698 AM393439 DQ893229 DQ896558	-80863	+	TSC_hg19_v1_chr1_+_68150883 AK314991 NM_001199741 NM_001199742 NM_001924 M60974 BC011757 DQ008445 EF581092 EF614238	-81087	+	TSC_hg19_v1_chr1_-_67896101 NM_001018067 NM_001018068 NM_001018069 NM_015640	-335880	-	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	65991	+	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	67113	-	BC005362 U96750 NM_004675	284388	-	AM393439|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ893229|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ896558|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001018067|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018068|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018069|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_015640|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK124028|LOC100289178|100289178|uncharacterized LOC100289178##AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3	0.662456	CTCF.p2:-26:0.662
chr7	105328498	105328625	reg1023754.p1	7.134	+	AK300338 NM_138495	-8953	-	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	-106626	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	-155915	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	188424	-	TSC_hg19_v1_chr7_+_105517250 AK125261	188703	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	275137	+	AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1##BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##AK125261|CDHR3|222256|cadherin-related family member 3##NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3	0.150199	
chr1	64708808	64708906	reg1017218.p1	7.133	+	BC029895 NM_152489	-39368	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	-469198	+	NM_001172818 AK300100	-619964	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	227661	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	501942	+	TSC_hg19_v1_chr1_-_65432181 BC062431 BC009079 NM_002227	723157	-	BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##NM_020925|CACHD1|57685|cache domain containing 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2##BC062431|JAK1|3716|Janus kinase 1##BC009079|JAK1|3716|Janus kinase 1##NM_002227|JAK1|3716|Janus kinase 1	0.978265	CTCF.p2:4:0.978
chr5	142301858	142301976	reg1019592.p1	7.133	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-151609	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-151945	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-224346	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	480906	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	481189	-	BC015610 TSC_hg19_v1_chr5_-_142783214	481294	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.866444	CTCF.p2:-20:0.866
chr7	142148365	142148489	reg1023304.p1	7.133	+	AY358487 BC035384 AK122940 NM_001001317	-190566	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-336888	+	AF016833 NM_004668 BC120872	-452735	+	NM_001190487	225703	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	308899	+	M12426 TSC_hg19_v1_chr7_+_142495248	346768	+	AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	1.016748	CTCF.p2:-16:0.996
chr3	151789871	151790012	reg1020323.p1	7.132	+	TSC_hg19_v1_chr3_+_151591430 AK290420 NM_033050 BC030948 AF247785	-198488	+	NM_001086 L32179 BC020706 AK290628 BC032309 CU689322	-258037	+	TSC_hg19_v1_chr3_+_151488214 BC014344	-301711	+	NM_021038 NM_207292	195887	+	TSC_hg19_v1_chr3_+_151986753 BC050535 BC043493	196801	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	197404	-	AK290420|SUCNR1|56670|succinate receptor 1##NM_033050|SUCNR1|56670|succinate receptor 1##BC030948|SUCNR1|56670|succinate receptor 1##AF247785|SUCNR1|56670|succinate receptor 1##NM_001086|AADAC|13|arylacetamide deacetylase (esterase)##L32179|AADAC|13|arylacetamide deacetylase (esterase)##BC020706|AADAC|13|arylacetamide deacetylase (esterase)##AK290628|AADAC|13|arylacetamide deacetylase (esterase)##BC032309|AADAC|13|arylacetamide deacetylase (esterase)##BC014344|LOC201651|201651|arylacetamide deacetylase (esterase) pseudogene##NM_021038|MBNL1|4154|muscleblind-like (Drosophila)##NM_207292|MBNL1|4154|muscleblind-like (Drosophila)##BC050535|MBNL1|4154|muscleblind-like (Drosophila)##BC043493|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093	0.59836	CTCF.p2:-15:0.598
chr12	9895805	9895911	reg1016167.p1	7.131	+	AF518873 BC093857 BC093859 NM_001253748 NM_001253750 NM_172004	-9982	-	BC063128 NM_001197318 NM_013269 AK310150 NM_001004419 AK310554 AK313554 BC019883 AF133299 AF285087 CU676474 FN813349 FN813350 FN813351 NM_001197317 NM_001197319	-73591	+	TSC_hg19_v1_chr12_+_9800760 AK096274	-94962	+	AY238518 CU675505 DQ893175 DQ896474 L07555 AK291869 AK303174 AK303383 BC007037 NM_001781 Z22576	17597	-	AF175206 AF175207 AF267244 AF267245 NM_016523 AJ305370 BC096734 BC098166 BC098257 BC098354	84238	+	X96719 AY142147 AB015628 BC005254 AK311232 TSC_hg19_v1_chr12_-_10021954 AK313916 AK307334	126100	-	AF518873|CLECL1|160365|C-type lectin-like 1##BC093857|CLECL1|160365|C-type lectin-like 1##BC093859|CLECL1|160365|C-type lectin-like 1##NM_001253748|CLECL1|160365|C-type lectin-like 1##NM_001253750|CLECL1|160365|C-type lectin-like 1##NM_172004|CLECL1|160365|C-type lectin-like 1##BC063128|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D##NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D##AK310150|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D##AK310554|CLEC2D|29121|C-type lectin domain family 2, member D##AK313554|CLEC2D|29121|C-type lectin domain family 2, member D##BC019883|CLEC2D|29121|C-type lectin domain family 2, member D##AF133299|CLEC2D|29121|C-type lectin domain family 2, member D##AF285087|CLEC2D|29121|C-type lectin domain family 2, member D##FN813349|CLEC2D|29121|C-type lectin domain family 2, member D##FN813350|CLEC2D|29121|C-type lectin domain family 2, member D##FN813351|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D##AK096274|LOC374443|374443|CLR pseudogene##AY238518|CD69|969|CD69 molecule##DQ893175|CD69|969|CD69 molecule##DQ896474|CD69|969|CD69 molecule##L07555|CD69|969|CD69 molecule##AK291869|CD69|969|CD69 molecule##AK303174|CD69|969|CD69 molecule##AK303383|CD69|969|CD69 molecule##BC007037|CD69|969|CD69 molecule##NM_001781|CD69|969|CD69 molecule##Z22576|CD69|969|CD69 molecule##AF175206|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF175207|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267244|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AF267245|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##NM_016523|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##AJ305370|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC096734|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098166|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098257|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##BC098354|KLRF1|51348|killer cell lectin-like receptor subfamily F, member 1##X96719|CLEC2B|9976|C-type lectin domain family 2, member B##AY142147|CLEC2B|9976|C-type lectin domain family 2, member B##AB015628|CLEC2B|9976|C-type lectin domain family 2, member B##BC005254|CLEC2B|9976|C-type lectin domain family 2, member B##AK311232|CLEC2B|9976|C-type lectin domain family 2, member B##AK313916|CLEC2B|9976|C-type lectin domain family 2, member B##AK307334|CLEC2B|9976|C-type lectin domain family 2, member B	0.91932	CTCF.p2:22:0.919
chr1	17811932	17812026	reg1019359.p2	7.130	+	TSC_hg19_v1_chr1_-_17766260 NM_018715	-45708	-	TSC_hg19_v1_chr1_-_17766174 AB040903	-45804	-	TSC_hg19_v1_chr1_-_17765069 BC053908 NM_001136204	-46918	-	TSC_hg19_v1_chr1_+_17846826 AK129959	34844	+	TSC_hg19_v1_chr1_+_17866365 AB046846 NM_018125 AK311076	54381	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	95036	+	NM_018715|RCC2|55920|regulator of chromosome condensation 2##AB040903|RCC2|55920|regulator of chromosome condensation 2##BC053908|RCC2|55920|regulator of chromosome condensation 2##NM_001136204|RCC2|55920|regulator of chromosome condensation 2##AK129959|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AB046846|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_018125|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK311076|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like	0.978501	CTCF.p2:-4:0.979
chr1	178331105	178331209	reg1018081.p1	7.130	+	AF047711 NM_004841 AK290308	-20523	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-267516	+	TSC_hg19_v1_chr1_+_178063306 BC063442	-267853	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	151109	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	363216	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	508989	-	AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##BC110611|RASAL2|9462|RAS protein activator like 2##BC063442|RASAL2|9462|RAS protein activator like 2##AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1	0.722052	CTCF.p2:-11:0.722
chr1	242618201	242618340	reg1018806.p2	7.130	+	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	-5500	-	BC132986 BC132988 AF276659 BC127722 NM_001004343	-455896	-	NM_003686 NM_006027 AF042282 AF091740 AF060479 AF084974	-606185	+	AK098092 NM_152666	69727	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	800086	-	TSC_hg19_v1_chr1_-_243418566 AK310003 BC050722	800302	-	AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_003686|EXO1|9156|exonuclease 1##NM_006027|EXO1|9156|exonuclease 1##AF042282|EXO1|9156|exonuclease 1##AF091740|EXO1|9156|exonuclease 1##AF060479|EXO1|9156|exonuclease 1##AF084974|EXO1|9156|exonuclease 1##AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa##AK310003|CEP170|9859|centrosomal protein 170kDa##BC050722|CEP170|9859|centrosomal protein 170kDa	0.500264	CTCF.p2:-9:0.500
chr3	39168196	39168324	reg1020273.p1	7.130	+	NM_001105513 NM_145755 AJ487015 BC062621 BC129948 AK022483 BC039691 AK302408 AK302465 CU687576	-19021	+	TSC_hg19_v1_chr3_-_39149122 BC075854 AK001574 AK057043 AJ409349 NM_031899 AK303847	-19134	-	CU687304 AB527597 TSC_hg19_v1_chr3_-_39149103 BC064624 AK300271 BC103826 BC103827 BC008928	-19189	-	TSC_hg19_v1_chr3_-_39195053 BC038949 AB053121 BC028213	26791	-	NM_033027 TSC_hg19_v1_chr3_-_39195146	26864	-	BC127119 BC139782 AY375160 NM_194293 TSC_hg19_v1_chr3_-_39234085 AJ626899 AJ626900 NM_001198621 AK096421 BX648565 CR749430	65825	-	NM_001105513|TTC21A|199223|tetratricopeptide repeat domain 21A##NM_145755|TTC21A|199223|tetratricopeptide repeat domain 21A##AJ487015|TTC21A|199223|tetratricopeptide repeat domain 21A##BC062621|TTC21A|199223|tetratricopeptide repeat domain 21A##BC129948|TTC21A|199223|tetratricopeptide repeat domain 21A##AK022483|TTC21A|199223|tetratricopeptide repeat domain 21A##BC039691|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302408|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302465|TTC21A|199223|tetratricopeptide repeat domain 21A##BC075854|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK001574|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK057043|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AJ409349|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##NM_031899|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK303847|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC064624|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK300271|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103826|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103827|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC008928|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC038949|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##AB053121|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC028213|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##NM_033027|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC127119|XIRP1|165904|xin actin-binding repeat containing 1##BC139782|XIRP1|165904|xin actin-binding repeat containing 1##AY375160|XIRP1|165904|xin actin-binding repeat containing 1##NM_194293|XIRP1|165904|xin actin-binding repeat containing 1##AJ626899|XIRP1|165904|xin actin-binding repeat containing 1##AJ626900|XIRP1|165904|xin actin-binding repeat containing 1##NM_001198621|XIRP1|165904|xin actin-binding repeat containing 1##AK096421|XIRP1|165904|xin actin-binding repeat containing 1##BX648565|XIRP1|165904|xin actin-binding repeat containing 1##CR749430|XIRP1|165904|xin actin-binding repeat containing 1	0.364351	CTCF.p2:-19:0.364
chr5	32590370	32590533	reg1019647.p2	7.130	+	NM_006713 TSC_hg19_v1_chr5_+_32585676 AK294124 AK311754 BC022339 AK307268 BC009610 BC018189 BC071655 BC063402 BC010537 BC105972 AB209285	-4795	+	TSC_hg19_v1_chr5_-_32444845 AK292214 AK309638 BC017879 NM_016107	-145515	-	TSC_hg19_v1_chr5_-_32444820 BC107417 AJ314790 BC030540 BC137084 BC137085	-145673	-	NM_001204376 AK300094 AK308301	120299	+	AK290870 NM_000908 NM_001204375 M59305	121037	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	121354	+	NM_006713|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK294124|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK311754|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC022339|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK307268|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC009610|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC018189|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC071655|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC063402|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC010537|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC105972|SUB1|10923|SUB1 homolog (S. cerevisiae)##AB209285|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK292214|ZFR|51663|zinc finger RNA binding protein##AK309638|ZFR|51663|zinc finger RNA binding protein##BC017879|ZFR|51663|zinc finger RNA binding protein##NM_016107|ZFR|51663|zinc finger RNA binding protein##BC107417|ZFR|51663|zinc finger RNA binding protein##AJ314790|ZFR|51663|zinc finger RNA binding protein##BC030540|ZFR|51663|zinc finger RNA binding protein##BC137084|ZFR|51663|zinc finger RNA binding protein##BC137085|ZFR|51663|zinc finger RNA binding protein##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)	0.898532	CTCF.p2:2:0.899
chr8	124167100	124167211	reg1019323.p1	7.130	+	TSC_hg19_v1_chr8_+_124084951 BC101724 BC111954 BC143523 BC143525 BC105800 AK094612	-82185	+	TSC_hg19_v1_chr8_+_124084927 AK056434 NM_001145088 NM_145647	-82242	+	TSC_hg19_v1_chr8_-_124054594 NM_001134671 NM_024295	-112536	-	NM_032899 NM_207006 BC052300 TSC_hg19_v1_chr8_+_124194829	27635	+	TSC_hg19_v1_chr8_+_124194906 BC007828 CU690902	27828	+	CU690903 TSC_hg19_v1_chr8_-_124220025	52820	-	BC101724|WDR67|93594|WD repeat domain 67##BC111954|WDR67|93594|WD repeat domain 67##BC143523|WDR67|93594|WD repeat domain 67##BC143525|WDR67|93594|WD repeat domain 67##BC105800|WDR67|93594|WD repeat domain 67##AK094612|WDR67|93594|WD repeat domain 67##AK056434|WDR67|93594|WD repeat domain 67##NM_001145088|WDR67|93594|WD repeat domain 67##NM_145647|WDR67|93594|WD repeat domain 67##NM_001134671|DERL1|79139|Der1-like domain family, member 1##NM_024295|DERL1|79139|Der1-like domain family, member 1##NM_032899|FAM83A|84985|family with sequence similarity 83, member A##NM_207006|FAM83A|84985|family with sequence similarity 83, member A##BC052300|FAM83A|84985|family with sequence similarity 83, member A##BC007828|FAM83A|84985|family with sequence similarity 83, member A	0.074878	
chr15	60885037	60885168	reg1018752.p1	7.129	+	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	-423	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-113828	-	AB587463 BC068065 BC009564 BC021114 BC052567 BC001388 BC013843 D00017 TSC_hg19_v1_chr15_-_60690186 AK222542 BX640598 AK297923 BC015834 BC023990 BC066955 BC093056 D28364 NM_001002857 NM_001002858 NM_001136015 NM_004039 AK309956 BC016774	-194941	-	U04899 U04898 NM_002943 NM_134260	34583	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	636322	-	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	636395	-	HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##BC068065|ANXA2|302|annexin A2##BC009564|ANXA2|302|annexin A2##BC021114|ANXA2|302|annexin A2##BC052567|ANXA2|302|annexin A2##BC001388|ANXA2|302|annexin A2##BC013843|ANXA2|302|annexin A2##D00017|ANXA2|302|annexin A2##AK222542|ANXA2|302|annexin A2##BX640598|ANXA2|302|annexin A2##AK297923|ANXA2|302|annexin A2##BC015834|ANXA2|302|annexin A2##BC023990|ANXA2|302|annexin A2##BC066955|ANXA2|302|annexin A2##BC093056|ANXA2|302|annexin A2##D28364|ANXA2|302|annexin A2##NM_001002857|ANXA2|302|annexin A2##NM_001002858|ANXA2|302|annexin A2##NM_001136015|ANXA2|302|annexin A2##NM_004039|ANXA2|302|annexin A2##BC016774|ANXA2|302|annexin A2##U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A	0.0	
chr1	5976172	5976306	reg1021653.p1	7.129	+	AY282806 NM_001042478 NM_018836	-1261135	+	TSC_hg19_v1_chr1_+_4714668 AF175409	-1261510	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-2159394	-	NM_001199861	76118	+	TSC_hg19_v1_chr1_-_6052456 AY118228	76206	-	TSC_hg19_v1_chr1_-_6052507 AK124074 AK314326 AF537130 BC040520 NM_015102	76270	-	AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##AF175409|AJAP1|55966|adherens junctions associated protein 1##BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AY118228|NPHP4|261734|nephronophthisis 4##AK124074|NPHP4|261734|nephronophthisis 4##AK314326|NPHP4|261734|nephronophthisis 4##AF537130|NPHP4|261734|nephronophthisis 4##BC040520|NPHP4|261734|nephronophthisis 4##NM_015102|NPHP4|261734|nephronophthisis 4	0.979642	CTCF.p2:-4:0.980
chr17	27229918	27230098	reg1005379.p1	7.129	+	AX795344 TSC_hg19_v1_chr17_-_27229986 AX795345 AX795340 AX795338 AX795342 BC015582 AX795337 AX795341 AX795339 AX795335 AX795336 AK296017 AX795346 AX795343 AY358566 NM_144683	-3	-	TSC_hg19_v1_chr17_-_27224717 NM_004475	-5296	-	M60922 CU678570 AB528533 BC003683 TSC_hg19_v1_chr17_-_27224641	-5400	-	TSC_hg19_v1_chr17_-_27240983 AK024290	11005	-	BC110882 TSC_hg19_v1_chr17_-_27278336	48322	-	TSC_hg19_v1_chr17_-_27278483 AY030283 NM_001033561 NM_020889	48488	-	BC015582|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AK296017|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AY358566|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##NM_144683|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##NM_004475|FLOT2|2319|flotillin 2##M60922|FLOT2|2319|flotillin 2##BC003683|FLOT2|2319|flotillin 2##AK024290|PHF12|57649|PHD finger protein 12##BC110882|PHF12|57649|PHD finger protein 12##AY030283|PHF12|57649|PHD finger protein 12##NM_001033561|PHF12|57649|PHD finger protein 12##NM_020889|PHF12|57649|PHD finger protein 12	0.026718	
chrX	48901361	48901473	reg1018384.p1	7.129	+	TSC_hg19_v1_chrX_-_48900948 AL161985 X96717 BC026027 NM_006521	-457	-	AB527281 EU446500 EU831602 EU831689 AK313540 BC001532 TSC_hg19_v1_chrX_-_48900884	-591	-	TSC_hg19_v1_chrX_-_48858674 AB032993 AB527837 AK292158 BC101544 BC101546 BX647801 BX647804 NM_020137 NM_207672	-42769	-	BC008769 NM_001163322 NM_033626 NM_001163321 NM_001163323 AK315837 AK294024 AK300366 AK293898	15116	+	CR457023 BC021213 TSC_hg19_v1_chrX_-_48931662 AK310550 AK023433 AK315374 AJ005896 NM_007213	30253	-	TSC_hg19_v1_chrX_-_48937549 AJ005897 AK225122 AK301084 AK294088 AK315717 BC000464 BC003037	36090	-	AL161985|TFE3|7030|transcription factor binding to IGHM enhancer 3##X96717|TFE3|7030|transcription factor binding to IGHM enhancer 3##BC026027|TFE3|7030|transcription factor binding to IGHM enhancer 3##NM_006521|TFE3|7030|transcription factor binding to IGHM enhancer 3##EU446500|TFE3|7030|transcription factor binding to IGHM enhancer 3##EU831602|TFE3|7030|transcription factor binding to IGHM enhancer 3##EU831689|TFE3|7030|transcription factor binding to IGHM enhancer 3##AK313540|TFE3|7030|transcription factor binding to IGHM enhancer 3##BC001532|TFE3|7030|transcription factor binding to IGHM enhancer 3##AB032993|GRIPAP1|56850|GRIP1 associated protein 1##AK292158|GRIPAP1|56850|GRIP1 associated protein 1##BC101544|GRIPAP1|56850|GRIP1 associated protein 1##BC101546|GRIPAP1|56850|GRIP1 associated protein 1##BX647801|GRIPAP1|56850|GRIP1 associated protein 1##BX647804|GRIPAP1|56850|GRIP1 associated protein 1##NM_020137|GRIPAP1|56850|GRIP1 associated protein 1##NM_207672|GRIPAP1|56850|GRIP1 associated protein 1##BC008769|CCDC120|90060|coiled-coil domain containing 120##NM_001163322|CCDC120|90060|coiled-coil domain containing 120##NM_033626|CCDC120|90060|coiled-coil domain containing 120##NM_001163321|CCDC120|90060|coiled-coil domain containing 120##NM_001163323|CCDC120|90060|coiled-coil domain containing 120##AK315837|CCDC120|90060|coiled-coil domain containing 120##AK294024|CCDC120|90060|coiled-coil domain containing 120##AK300366|CCDC120|90060|coiled-coil domain containing 120##AK293898|CCDC120|90060|coiled-coil domain containing 120##CR457023|PRAF2|11230|PRA1 domain family, member 2##BC021213|PRAF2|11230|PRA1 domain family, member 2##AK023433|PRAF2|11230|PRA1 domain family, member 2##AK315374|PRAF2|11230|PRA1 domain family, member 2##AJ005896|PRAF2|11230|PRA1 domain family, member 2##NM_007213|PRAF2|11230|PRA1 domain family, member 2##AJ005897|WDR45|11152|WD repeat domain 45##AK225122|WDR45|11152|WD repeat domain 45##AK301084|WDR45|11152|WD repeat domain 45##AK315717|WDR45|11152|WD repeat domain 45##BC000464|WDR45|11152|WD repeat domain 45##BC003037|WDR45|11152|WD repeat domain 45	0.331155	CTCF.p2:3:0.331
chr12	72174131	72174249	reg1020352.p1	7.128	+	AB385582 AM393692 TSC_hg19_v1_chr12_+_72148987	-25242	+	BC021901 BC092475 TSC_hg19_v1_chr12_+_72148653 AF091035 NM_014999	-25535	+	TSC_hg19_v1_chr12_+_72080176 AK001798 AK223148 AK315587	-93963	+	NM_001146213 NM_001146214 NM_022771 TSC_hg19_v1_chr12_+_72233538 AK022147 AK297626 AK307922 BC028352 AK225747 AL833639 AK225221 AK292306 AB449901	59345	+	AY098914 NM_173353 BC114442 BC114499 AK094614	158500	+	TSC_hg19_v1_chr12_-_72666143 BC093901 BC093903	491988	-	AM393692|RAB21|23011|RAB21, member RAS oncogene family##BC021901|RAB21|23011|RAB21, member RAS oncogene family##BC092475|RAB21|23011|RAB21, member RAS oncogene family##AF091035|RAB21|23011|RAB21, member RAS oncogene family##NM_014999|RAB21|23011|RAB21, member RAS oncogene family##AK001798|TMEM19|55266|transmembrane protein 19##AK223148|TMEM19|55266|transmembrane protein 19##AK315587|TMEM19|55266|transmembrane protein 19##NM_001146213|TBC1D15|64786|TBC1 domain family, member 15##NM_001146214|TBC1D15|64786|TBC1 domain family, member 15##NM_022771|TBC1D15|64786|TBC1 domain family, member 15##AK022147|TBC1D15|64786|TBC1 domain family, member 15##AK297626|TBC1D15|64786|TBC1 domain family, member 15##AK307922|TBC1D15|64786|TBC1 domain family, member 15##BC028352|TBC1D15|64786|TBC1 domain family, member 15##AK225747|TBC1D15|64786|TBC1 domain family, member 15##AL833639|TBC1D15|64786|TBC1 domain family, member 15##AK225221|TBC1D15|64786|TBC1 domain family, member 15##AK292306|TBC1D15|64786|TBC1 domain family, member 15##AB449901|TBC1D15|64786|TBC1 domain family, member 15##AY098914|TPH2|121278|tryptophan hydroxylase 2##NM_173353|TPH2|121278|tryptophan hydroxylase 2##BC114442|TPH2|121278|tryptophan hydroxylase 2##BC114499|TPH2|121278|tryptophan hydroxylase 2##AK094614|TPH2|121278|tryptophan hydroxylase 2##BC093901|LOC283392|283392|uncharacterized LOC283392##BC093903|LOC283392|283392|uncharacterized LOC283392	0.984588	CTCF.p2:-2:0.985
chr19	7745553	7745687	reg1017682.p1	7.128	+	TSC_hg19_v1_chr19_+_7741975 BC104796 BC104798 NM_174918 AF461156 BC035847	-3653	+	AF290874 AF323081 AY207314 BC069302 NM_001193374 NM_020415 TSC_hg19_v1_chr19_+_7733975 BC101554 BC101560 AF205952 AY359066	-11638	+	AB002559 U63533 TSC_hg19_v1_chr19_+_7702028 AK302257 AB464275 BT006915	-43593	+	NM_001042462 TSC_hg19_v1_chr19_+_7745726 AK292001	97	+	TSC_hg19_v1_chr19_+_7745742 BC042161 NM_174894 NM_001042461 BC022836	135	+	TSC_hg19_v1_chr19_-_7764328 NM_001207019	18706	-	BC104796|C19orf59|199675|chromosome 19 open reading frame 59##BC104798|C19orf59|199675|chromosome 19 open reading frame 59##NM_174918|C19orf59|199675|chromosome 19 open reading frame 59##AF461156|C19orf59|199675|chromosome 19 open reading frame 59##BC035847|C19orf59|199675|chromosome 19 open reading frame 59##AF290874|RETN|56729|resistin##AF323081|RETN|56729|resistin##AY207314|RETN|56729|resistin##BC069302|RETN|56729|resistin##NM_001193374|RETN|56729|resistin##NM_020415|RETN|56729|resistin##BC101554|RETN|56729|resistin##BC101560|RETN|56729|resistin##AF205952|RETN|56729|resistin##AY359066|RETN|56729|resistin##AB002559|STXBP2|6813|syntaxin binding protein 2##U63533|STXBP2|6813|syntaxin binding protein 2##AK302257|STXBP2|6813|syntaxin binding protein 2##BT006915|STXBP2|6813|syntaxin binding protein 2##NM_001042462|TRAPPC5|126003|trafficking protein particle complex 5##AK292001|TRAPPC5|126003|trafficking protein particle complex 5##BC042161|TRAPPC5|126003|trafficking protein particle complex 5##NM_174894|TRAPPC5|126003|trafficking protein particle complex 5##NM_001042461|TRAPPC5|126003|trafficking protein particle complex 5##BC022836|TRAPPC5|126003|trafficking protein particle complex 5##NM_001207019|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)	0.26691	CTCF.p2:18:0.267
chr13	110262982	110263116	reg1020037.p1	7.127	+	AB290159 AK127806 NM_001198950	-981480	+	AB020672 BC146791 NM_015011 AL834447	-1014535	+	DQ857728 TSC_hg19_v1_chr13_+_108955871	-1307232	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	175859	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	539686	-	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	696460	-	AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1	0.999031	CTCF.p2:12:0.999
chr10	112632484	112632642	reg1018343.p1	7.126	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	-849	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	-951	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-228434	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	46133	-	TSC_hg19_v1_chr10_-_112678952 BC062778 AK021501 BC104248 BC104249 BC113000 BC113001 AK025724 BC105804 AK307314 BC073157 NM_001195304 NM_001195305 NM_001195307 NM_001243783	46449	-	TSC_hg19_v1_chr10_+_112679309 NM_007373	46732	+	AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1##BC062778|BBIP1|92482|BBSome interacting protein 1##AK021501|BBIP1|92482|BBSome interacting protein 1##BC104248|BBIP1|92482|BBSome interacting protein 1##BC104249|BBIP1|92482|BBSome interacting protein 1##BC113000|BBIP1|92482|BBSome interacting protein 1##BC113001|BBIP1|92482|BBSome interacting protein 1##AK025724|BBIP1|92482|BBSome interacting protein 1##BC105804|BBIP1|92482|BBSome interacting protein 1##AK307314|BBIP1|92482|BBSome interacting protein 1##BC073157|BBIP1|92482|BBSome interacting protein 1##NM_001195304|BBIP1|92482|BBSome interacting protein 1##NM_001195305|BBIP1|92482|BBSome interacting protein 1##NM_001195307|BBIP1|92482|BBSome interacting protein 1##NM_001243783|BBIP1|92482|BBSome interacting protein 1##NM_007373|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)	0.080817	
chr1	185286603	185286725	reg1020009.p1	7.126	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-194	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-345	-	TSC_hg19_v1_chr1_+_185126418 AK291443	-160268	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	416912	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	978743	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	1057593	-	NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)	0.0	
chr12	56390036	56390140	reg1020590.p1	7.126	+	AK292597 AK296517 TSC_hg19_v1_chr12_+_56367884 BC065298 BC056422	-22180	+	TSC_hg19_v1_chr12_+_56367880 BC050558	-22209	+	TSC_hg19_v1_chr12_+_56367857 BC040143 BX647808 BX537408	-22238	+	TSC_hg19_v1_chr12_+_56391069 NM_000456 NM_001032386 NM_001032387 AK312763 AK309669	981	+	NM_022465 AK122880	24671	+	NM_001029 BC002604	45615	+	AK292597|RAB5B|5869|RAB5B, member RAS oncogene family##AK296517|RAB5B|5869|RAB5B, member RAS oncogene family##BC065298|RAB5B|5869|RAB5B, member RAS oncogene family##BC056422|RAB5B|5869|RAB5B, member RAS oncogene family##BC050558|RAB5B|5869|RAB5B, member RAS oncogene family##BC040143|RAB5B|5869|RAB5B, member RAS oncogene family##BX647808|RAB5B|5869|RAB5B, member RAS oncogene family##BX537408|RAB5B|5869|RAB5B, member RAS oncogene family##NM_000456|SUOX|6821|sulfite oxidase##NM_001032386|SUOX|6821|sulfite oxidase##NM_001032387|SUOX|6821|sulfite oxidase##AK312763|SUOX|6821|sulfite oxidase##NM_022465|IKZF4|64375|IKAROS family zinc finger 4 (Eos)##AK122880|IKZF4|64375|IKAROS family zinc finger 4 (Eos)##NM_001029|RPS26|6231|ribosomal protein S26##BC002604|RPS26|6231|ribosomal protein S26	0.996935	CTCF.p2:-1:0.997
chr19	16734477	16734602	reg1019903.p2	7.126	+	TSC_hg19_v1_chr19_+_16683381 AK094229	-51142	+	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	-51343	-	TSC_hg19_v1_chr19_-_16653256 NM_006387	-81276	-	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	4461	-	TSC_hg19_v1_chr19_-_16770944 AK025602 BC069279 BX648276	36390	-	TSC_hg19_v1_chr19_-_16770956 NM_024104	36423	-	BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##NM_006387|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26##AK025602|C19orf42|79086|chromosome 19 open reading frame 42##BC069279|C19orf42|79086|chromosome 19 open reading frame 42##BX648276|C19orf42|79086|chromosome 19 open reading frame 42##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42	0.28473	CTCF.p2:4:0.285
chrX	136036418	136036535	reg1020834.p1	7.126	+	TSC_hg19_v1_chrX_+_135991587 AK055694	-44920	+	TSC_hg19_v1_chrX_-_135962939 NM_001164803 NM_002139	-73541	-	TSC_hg19_v1_chrX_-_135962882 BC006550 BC007435 BX647131 AK091520 AK096015 AK304573 AK304868 AK309911	-73582	-	BC069439 NM_054021 CU686814	77359	-	TSC_hg19_v1_chrX_+_136648313 AF028706 NM_003413	611853	+	EU532020 TSC_hg19_v1_chrX_+_136648691 BC113393 BC113395 AB464363 HQ258447	612291	+	NM_001164803|RBMX|27316|RNA binding motif protein, X-linked##NM_002139|RBMX|27316|RNA binding motif protein, X-linked##BC006550|RBMX|27316|RNA binding motif protein, X-linked##BC007435|RBMX|27316|RNA binding motif protein, X-linked##BX647131|RBMX|27316|RNA binding motif protein, X-linked##AK091520|RBMX|27316|RNA binding motif protein, X-linked##AK096015|RBMX|27316|RNA binding motif protein, X-linked##AK304573|RBMX|27316|RNA binding motif protein, X-linked##AK304868|RBMX|27316|RNA binding motif protein, X-linked##AK309911|RBMX|27316|RNA binding motif protein, X-linked##BC069439|GPR101|83550|G protein-coupled receptor 101##NM_054021|GPR101|83550|G protein-coupled receptor 101##AF028706|ZIC3|7547|Zic family member 3##NM_003413|ZIC3|7547|Zic family member 3##EU532020|ZIC3|7547|Zic family member 3##BC113393|ZIC3|7547|Zic family member 3##BC113395|ZIC3|7547|Zic family member 3##HQ258447|ZIC3|7547|Zic family member 3	0.933793	CTCF.p2:1:0.915
chr1	172578804	172578941	reg1021533.p1	7.125	+	TSC_hg19_v1_chr1_+_172502291 NM_016227 AK302509 AL035291 BC137125 BC144487	-76491	+	TSC_hg19_v1_chr1_+_172502152 AK302949 AJ250075 NM_014283	-76730	+	TSC_hg19_v1_chr1_-_172413210 AL035301 BC063473 NM_002642 NM_153747	-165644	-	D38122 AK314874 NM_000639 X89102 BC017502 U08137 AF288573 U11821 AB528416 DQ893466 DQ896147 CU675998 AY225406 AY858799	49377	+	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	441184	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	595781	-	NM_016227|C1orf9|51430|chromosome 1 open reading frame 9##AK302509|C1orf9|51430|chromosome 1 open reading frame 9##AL035291|C1orf9|51430|chromosome 1 open reading frame 9##BC137125|C1orf9|51430|chromosome 1 open reading frame 9##BC144487|C1orf9|51430|chromosome 1 open reading frame 9##AK302949|C1orf9|51430|chromosome 1 open reading frame 9##AJ250075|C1orf9|51430|chromosome 1 open reading frame 9##NM_014283|C1orf9|51430|chromosome 1 open reading frame 9##AL035301|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##BC063473|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##NM_002642|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##NM_153747|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##D38122|FASLG|356|Fas ligand (TNF superfamily, member 6)##AK314874|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_000639|FASLG|356|Fas ligand (TNF superfamily, member 6)##X89102|FASLG|356|Fas ligand (TNF superfamily, member 6)##BC017502|FASLG|356|Fas ligand (TNF superfamily, member 6)##U08137|FASLG|356|Fas ligand (TNF superfamily, member 6)##AF288573|FASLG|356|Fas ligand (TNF superfamily, member 6)##U11821|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ893466|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ896147|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY225406|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY858799|FASLG|356|Fas ligand (TNF superfamily, member 6)##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	0.89702	CTCF.p2:-9:0.885
chr16	73599314	73599444	reg1015817.p2	7.125	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-506793	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-517158	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-607674	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	731314	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	731392	+	TSC_hg19_v1_chr16_-_74401811 AK124154	802433	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.955906	CTCF.p2:-20:0.956
chr19	43071201	43071314	reg1019714.p1	7.125	+	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	-38665	-	X16356 TSC_hg19_v1_chr19_-_43031473	-39848	-	BC093946 BC112095 AK292985 AY358433 NM_198477 AY598464	-124133	-	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	27773	-	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	173344	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	198567	-	M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17##BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17##NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17##DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8	0.999699	CTCF.p2:29:1.000
chr2	173575369	173575486	reg1020479.p1	7.125	+	AB528474 CU691664 TSC_hg19_v1_chr2_+_173420875 DQ891300 DQ893348 DQ894484 DQ896668 DQ234350	-154552	+	TSC_hg19_v1_chr2_+_173420856 AK312700 AK304388 BC039158	-154602	+	TSC_hg19_v1_chr2_+_173420776 NM_002610	-154646	+	TSC_hg19_v1_chr2_+_173600519 NM_007023	25094	+	AB209681 TSC_hg19_v1_chr2_+_173600599 U78516	25173	+	TSC_hg19_v1_chr2_+_173600637 AB027471 AK313084 BC024004 AB590290 DQ890549 DQ894011	25245	+	DQ891300|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ893348|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ894484|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ896668|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ234350|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##AK312700|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##AK304388|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##BC039158|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##NM_002610|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##NM_007023|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB209681|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##U78516|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB027471|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK313084|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##BC024004|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ890549|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ894011|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4	0.990391	CTCF.p2:-5:0.990
chr5	42005767	42005900	reg1019525.p1	7.125	+	AK024075 NM_012176 NM_033484 BC048098 AK001003 BC040011 AF129534 AF176703	-80447	+	TSC_hg19_v1_chr5_+_41904459 BC131721 NM_175921 BX648350	-101356	+	TSC_hg19_v1_chr5_-_41870706 NM_000436	-135087	-	AK000840 TSC_hg19_v1_chr5_-_42175357	169523	-	TSC_hg19_v1_chr5_+_42423913 NM_000163 X06562	418085	+	AF230801 NM_001242399 NM_001242400 AF230800	418732	+	AK024075|FBXO4|26272|F-box protein 4##NM_012176|FBXO4|26272|F-box protein 4##NM_033484|FBXO4|26272|F-box protein 4##BC048098|FBXO4|26272|F-box protein 4##AK001003|FBXO4|26272|F-box protein 4##BC040011|FBXO4|26272|F-box protein 4##AF129534|FBXO4|26272|F-box protein 4##AF176703|FBXO4|26272|F-box protein 4##BC131721|C5orf51|285636|chromosome 5 open reading frame 51##NM_175921|C5orf51|285636|chromosome 5 open reading frame 51##BX648350|C5orf51|285636|chromosome 5 open reading frame 51##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1##NM_000163|GHR|2690|growth hormone receptor##X06562|GHR|2690|growth hormone receptor##AF230801|GHR|2690|growth hormone receptor##NM_001242399|GHR|2690|growth hormone receptor##NM_001242400|GHR|2690|growth hormone receptor##AF230800|GHR|2690|growth hormone receptor	0.946187	CTCF.p2:10:0.946
chrX	130128764	130128877	reg1020561.p1	7.125	+	TSC_hg19_v1_chrX_-_130037207 AK000353 NM_006375 NM_182314	-91614	-	TSC_hg19_v1_chrX_-_130037184 BC108713 AL133207 AK289812 AK289837	-91643	-	TSC_hg19_v1_chrX_+_129535955 BC003676 NM_016024 AK292855 BC105582 BC012345 AL050405 BC033750 BC063517 BC010036 BC040433 BC050707	-592867	+	AK128203 NM_144967 AK296748 AX721074	63452	+	BC028312 NM_001170963	294214	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	294442	-	AK000353|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_006375|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_182314|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##BC108713|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AL133207|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289812|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289837|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##BC003676|RBMX2|51634|RNA binding motif protein, X-linked 2##NM_016024|RBMX2|51634|RNA binding motif protein, X-linked 2##AK292855|RBMX2|51634|RNA binding motif protein, X-linked 2##BC105582|RBMX2|51634|RNA binding motif protein, X-linked 2##BC012345|RBMX2|51634|RNA binding motif protein, X-linked 2##AL050405|RBMX2|51634|RNA binding motif protein, X-linked 2##BC033750|RBMX2|51634|RNA binding motif protein, X-linked 2##BC063517|RBMX2|51634|RNA binding motif protein, X-linked 2##BC010036|RBMX2|51634|RNA binding motif protein, X-linked 2##BC040433|RBMX2|51634|RNA binding motif protein, X-linked 2##BC050707|RBMX2|51634|RNA binding motif protein, X-linked 2##AK128203|ARHGAP36|158763|Rho GTPase activating protein 36##NM_144967|ARHGAP36|158763|Rho GTPase activating protein 36##AK296748|ARHGAP36|158763|Rho GTPase activating protein 36##BC028312|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1	0.996363	CTCF.p2:5:0.996
chr11	108605814	108605943	reg1021880.p1	7.124	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-70064	+	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	-141474	-	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	-236683	-	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	686965	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	687021	+	AK095101 TSC_hg19_v1_chr11_+_109963524	1357650	+	AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5##AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C	0.988106	CTCF.p2:4:0.988
chr1	81880239	81880354	reg1018167.p1	7.124	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	-108369	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-2407869	-	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-2764798	+	AF104266 AF104938 AF104939 NM_012302	385785	+	AK097722 TSC_hg19_v1_chr1_-_84326308	2445972	-	TSC_hg19_v1_chr1_-_84326677 BC036594	2446380	-	BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.0	
chrX	48794845	48795010	reg1015851.p2	7.124	+	U77735 BC018111 AK312745 TSC_hg19_v1_chrX_-_48776302 AK290931 NM_006875	-18580	-	D84454 NM_001042498	-25693	-	CR450287 D88146 NM_005660 AK225508 AK290284 AK293415 AK293419 AK298484 AK299748 TSC_hg19_v1_chrX_-_48768926 BC035747 NM_001032289 AK292816	-25996	-	TSC_hg19_v1_chrX_-_48814831 BC028225	19878	-	TSC_hg19_v1_chrX_-_48814870 BC009917 NM_001136157 NM_001136158 NM_017602	19947	-	TSC_hg19_v1_chrX_-_48815168 BC098440	20204	-	U77735|PIM2|11040|pim-2 oncogene##BC018111|PIM2|11040|pim-2 oncogene##AK312745|PIM2|11040|pim-2 oncogene##AK290931|PIM2|11040|pim-2 oncogene##NM_006875|PIM2|11040|pim-2 oncogene##D84454|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001042498|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##CR450287|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##D88146|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_005660|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK225508|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK290284|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293415|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293419|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK298484|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK299748|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC035747|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001032289|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK292816|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC028225|OTUD5|55593|OTU domain containing 5##BC009917|OTUD5|55593|OTU domain containing 5##NM_001136157|OTUD5|55593|OTU domain containing 5##NM_001136158|OTUD5|55593|OTU domain containing 5##NM_017602|OTUD5|55593|OTU domain containing 5##BC098440|OTUD5|55593|OTU domain containing 5	0.79814	CTCF.p2:60:0.798
chr11	82026262	82026419	reg1023456.p1	7.123	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-2874616	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-3740445	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-3740548	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	418558	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	585177	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	586434	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.302188	CTCF.p2:-8:0.302
chr4	4184681	4184832	reg1019391.p1	7.123	+	BC044637 TSC_hg19_v1_chr4_-_3957162	-227601	-	J03853 NM_000683	-416461	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-416638	+	BC130430 BC130432 NM_177998	43861	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	65192	-	TSC_hg19_v1_chr4_-_4291782 AL136750 NM_001145725	107011	-	BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128##AL136750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_001145725|LYAR|55646|Ly1 antibody reactive homolog (mouse)	0.99952	CTCF.p2:34:1.000
chr1	226899035	226899148	reg1017667.p1	7.122	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-162474	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-162590	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-303288	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	27847	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	159189	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	228855	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.0	
chr12	9621741	9621840	reg1018615.p2	7.122	+	TSC_hg19_v1_chr12_-_9600810 BC035635 BC128040 BC111733	-20992	-	TSC_hg19_v1_chr12_+_9436619 AK123583 AK309820	-185165	+	BC111756 AK313639 NM_002864 X54380	-260828	-	BC027885 BC113997 BC114516 U11276 NM_002258 AK292022	138706	-	TSC_hg19_v1_chr12_+_9800760 AK096274	179106	+	BC063128 NM_001197318 NM_013269 AK310150 NM_001004419 AK310554 AK313554 BC019883 AF133299 AF285087 CU676474 FN813349 FN813350 FN813351 NM_001197317 NM_001197319	200477	+	BC035635|DDX12P|440081|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12, pseudogene##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK309820|LOC642846|642846|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like##BC111756|PZP|5858|pregnancy-zone protein##AK313639|PZP|5858|pregnancy-zone protein##NM_002864|PZP|5858|pregnancy-zone protein##X54380|PZP|5858|pregnancy-zone protein##BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK096274|LOC374443|374443|CLR pseudogene##BC063128|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D##NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D##AK310150|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D##AK310554|CLEC2D|29121|C-type lectin domain family 2, member D##AK313554|CLEC2D|29121|C-type lectin domain family 2, member D##BC019883|CLEC2D|29121|C-type lectin domain family 2, member D##AF133299|CLEC2D|29121|C-type lectin domain family 2, member D##AF285087|CLEC2D|29121|C-type lectin domain family 2, member D##FN813349|CLEC2D|29121|C-type lectin domain family 2, member D##FN813350|CLEC2D|29121|C-type lectin domain family 2, member D##FN813351|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D	0.0	
chr19	50762289	50762388	reg1015190.p1	7.121	+	BC018933 TSC_hg19_v1_chr19_+_50713879	-48487	+	TSC_hg19_v1_chr19_+_50706878 AY165122 BC129803 NM_001077186 NM_001145809 NM_024729 AK307783 AB290169	-55447	+	TSC_hg19_v1_chr19_+_50691445 AK125082	-70897	+	BC007877 TSC_hg19_v1_chr19_+_50796867	34506	+	AF055989 NM_004977	70295	-	BC085008 BC006149 BC111705 BC040958 BC053864 BC065203 BC032360 AF090387 AF098485 AF200344 AK300884 BC019048 AK310134 TSC_hg19_v1_chr19_-_50848025	85654	-	BC018933|MYH14|79784|myosin, heavy chain 14, non-muscle##AY165122|MYH14|79784|myosin, heavy chain 14, non-muscle##BC129803|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_001077186|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_001145809|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_024729|MYH14|79784|myosin, heavy chain 14, non-muscle##AK307783|MYH14|79784|myosin, heavy chain 14, non-muscle##AB290169|MYH14|79784|myosin, heavy chain 14, non-muscle##AK125082|MYH14|79784|myosin, heavy chain 14, non-muscle##BC007877|MYH14|79784|myosin, heavy chain 14, non-muscle##AF055989|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##NM_004977|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##BC085008|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC006149|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC111705|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC040958|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC053864|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC065203|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC032360|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF090387|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF098485|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF200344|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK300884|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC019048|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK310134|NAPSB|256236|napsin B aspartic peptidase pseudogene	0.791428	CTCF.p2:18:0.791
chr3	101528301	101528402	reg1002824.p2	7.120	+	AK289689 NM_001134456	-30066	+	TSC_hg19_v1_chr3_+_101498080 BC009431	-30263	+	NM_145037 TSC_hg19_v1_chr3_+_101498054	-30303	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	18609	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	40023	+	AY090780 NM_175056 BC143817	625516	+	AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##BC009431|FAM55C|91775|family with sequence similarity 55, member C##NM_145037|FAM55C|91775|family with sequence similarity 55, member C##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1	0.0	
chr6	144906509	144906643	reg1018522.p1	7.120	+	NM_007124 X69086	-293658	+	TSC_hg19_v1_chr6_+_144607461 AK292506	-299096	+	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	-434855	+	AK124757 TSC_hg19_v1_chr6_+_146056061	1149458	+	TSC_hg19_v1_chr6_-_146056437 AJ130763 AJ130764	1149837	-	AF454494 TSC_hg19_v1_chr6_-_146056628 AF454493 BC005286 AF084535	1150025	-	NM_007124|UTRN|7402|utrophin##X69086|UTRN|7402|utrophin##AK292506|UTRN|7402|utrophin##NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11##AK124757|LOC100507557|100507557|uncharacterized LOC100507557##AJ130763|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AJ130764|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454494|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454493|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##BC005286|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF084535|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	0.031523	
chr6	71081355	71081475	reg1019713.p1	7.119	+	X54412 BC015409 TSC_hg19_v1_chr6_-_71012827 NM_001851	-68615	-	X54413 BC008620 BC063646 NM_078485	-88583	-	AK309023 TSC_hg19_v1_chr6_+_70577418	-504053	+	TSC_hg19_v1_chr6_+_71123122 NM_001105531 NM_020819	41698	+	TSC_hg19_v1_chr6_+_71123224 CR749254 BC131782	41799	+	NM_001162529 AB037832	54742	+	X54412|COL9A1|1297|collagen, type IX, alpha 1##BC015409|COL9A1|1297|collagen, type IX, alpha 1##NM_001851|COL9A1|1297|collagen, type IX, alpha 1##X54413|COL9A1|1297|collagen, type IX, alpha 1##BC008620|COL9A1|1297|collagen, type IX, alpha 1##BC063646|COL9A1|1297|collagen, type IX, alpha 1##NM_078485|COL9A1|1297|collagen, type IX, alpha 1##NM_001105531|FAM135A|57579|family with sequence similarity 135, member A##NM_020819|FAM135A|57579|family with sequence similarity 135, member A##CR749254|FAM135A|57579|family with sequence similarity 135, member A##BC131782|FAM135A|57579|family with sequence similarity 135, member A##NM_001162529|FAM135A|57579|family with sequence similarity 135, member A##AB037832|FAM135A|57579|family with sequence similarity 135, member A	0.975029	CTCF.p2:-5:0.975
chr18	13216216	13216333	reg1021626.p1	7.118	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-224929	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-268210	+	TSC_hg19_v1_chr18_+_12948009 AK314403	-268268	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	2511	+	NM_001003674 NM_001003675	395390	+	AF009426 AF009427 NM_004338 NM_181483	404592	+	AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##AK314403|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1	0.0	
chr7	123264754	123264902	reg1021745.p1	7.118	+	AF428257 BC100874 BC100875 BC100876 BC100877 NM_080928	-15735	+	CR933664 BT006695 TSC_hg19_v1_chr7_-_123197862 AK022209 BC020821 BC070236 BC070237 U64028 AK315458 U53468 BC000813 NM_005000	-66938	-	BC091520 BC128181 BC128182 AK093153 AX747958 BC032838 BC068607 NM_178827	-90184	-	NM_207163 AK299434 AK299389 AK300698 AK309449 BC017911 BC062765 AK309496 AB591033	31109	+	TSC_hg19_v1_chr7_-_123389069 AM295156 CU690940 AB587496 BC013776 AK289795 D88460 CR749438 BC028602 BC052955 NM_003941	124146	-	AF009010 NM_012269	220394	+	AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15##NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15##CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC091520|IQUB|154865|IQ motif and ubiquitin domain containing##BC128181|IQUB|154865|IQ motif and ubiquitin domain containing##BC128182|IQUB|154865|IQ motif and ubiquitin domain containing##AK093153|IQUB|154865|IQ motif and ubiquitin domain containing##BC032838|IQUB|154865|IQ motif and ubiquitin domain containing##BC068607|IQUB|154865|IQ motif and ubiquitin domain containing##NM_178827|IQUB|154865|IQ motif and ubiquitin domain containing##NM_207163|LMOD2|442721|leiomodin 2 (cardiac)##AK299434|LMOD2|442721|leiomodin 2 (cardiac)##AK299389|LMOD2|442721|leiomodin 2 (cardiac)##AK300698|LMOD2|442721|leiomodin 2 (cardiac)##BC017911|LMOD2|442721|leiomodin 2 (cardiac)##BC062765|LMOD2|442721|leiomodin 2 (cardiac)##AM295156|WASL|8976|Wiskott-Aldrich syndrome-like##BC013776|WASL|8976|Wiskott-Aldrich syndrome-like##AK289795|WASL|8976|Wiskott-Aldrich syndrome-like##D88460|WASL|8976|Wiskott-Aldrich syndrome-like##CR749438|WASL|8976|Wiskott-Aldrich syndrome-like##BC028602|WASL|8976|Wiskott-Aldrich syndrome-like##BC052955|WASL|8976|Wiskott-Aldrich syndrome-like##NM_003941|WASL|8976|Wiskott-Aldrich syndrome-like##AF009010|HYAL4|23553|hyaluronoglucosaminidase 4##NM_012269|HYAL4|23553|hyaluronoglucosaminidase 4	0.017319	
chr7	93852773	93852884	reg1014276.p1	7.118	+	BT009853 DQ894078 BC000899 TSC_hg19_v1_chr7_-_93633668 CR749267 AF007551 AK313984 BC012595 NM_005868	-219214	-	NM_004126 BC009709	-301772	+	BC029367 NM_021955	-317009	+	J03464 NM_000089 X02488	171044	+	TSC_hg19_v1_chr7_+_94024206 AK297786 AK223175 AK300194 Z74616 AK226074 BC042586 BC054498 Y00724 CU691094 AB384984	171443	+	TSC_hg19_v1_chr7_+_94139172 BC029543 NM_022900 BC063284 AF397424	286294	+	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##J03464|COL1A2|1278|collagen, type I, alpha 2##NM_000089|COL1A2|1278|collagen, type I, alpha 2##X02488|COL1A2|1278|collagen, type I, alpha 2##AK297786|COL1A2|1278|collagen, type I, alpha 2##AK223175|COL1A2|1278|collagen, type I, alpha 2##AK300194|COL1A2|1278|collagen, type I, alpha 2##Z74616|COL1A2|1278|collagen, type I, alpha 2##AK226074|COL1A2|1278|collagen, type I, alpha 2##BC042586|COL1A2|1278|collagen, type I, alpha 2##BC054498|COL1A2|1278|collagen, type I, alpha 2##Y00724|COL1A2|1278|collagen, type I, alpha 2##BC029543|CASD1|64921|CAS1 domain containing 1##NM_022900|CASD1|64921|CAS1 domain containing 1##BC063284|CASD1|64921|CAS1 domain containing 1##AF397424|CASD1|64921|CAS1 domain containing 1	0.108998	
chr7	124700064	124700202	reg1019461.p1	7.117	+	NM_001042594 NM_015450	-130097	-	BC130600 BC130604 NM_001024603	-269331	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	-294337	-	NM_000845	2183435	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	2192232	-	TSC_hg19_v1_chr7_-_126893165 AK290197	2193019	-	NM_001042594|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_015450|POT1|25913|protection of telomeres 1 homolog (S. pombe)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##AK290197|GRM8|2918|glutamate receptor, metabotropic 8	0.992841	CTCF.p2:-22:0.993
chr9	24246137	24246235	reg1019770.p2	7.117	+	AB209294 NM_004432	-420124	-	BC042393 NM_001171195 TSC_hg19_v1_chr9_-_23821847	-424342	-	TSC_hg19_v1_chr9_-_23821819 BC035004	-424373	-	BC017510 TSC_hg19_v1_chr9_-_25678278 BC046919 AY168647 BC110824	1432147	-	NM_001004125	1432669	-	AK131322 NM_001004352	1820486	+	AB209294|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_004432|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC042393|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171195|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC035004|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC017510|TUSC1|286319|tumor suppressor candidate 1##BC046919|TUSC1|286319|tumor suppressor candidate 1##AY168647|TUSC1|286319|tumor suppressor candidate 1##BC110824|TUSC1|286319|tumor suppressor candidate 1##NM_001004125|TUSC1|286319|tumor suppressor candidate 1##AK131322|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004352|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323	0.946461	CTCF.p2:-1:0.946
chrX	41640877	41641006	reg1019965.p1	7.117	+	BC070180 NM_080817 AK122626 AK313702 AL832460	-57521	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	-92674	+	AJ278865 AF254868 NM_022567	-334242	+	AB208859 AB590064 HQ258518 AY705392 AF035582 BC117311 BC143454 BC143456 AF032119 NM_001126054 NM_001126055 NM_003688 AK313399	141384	-	BC044787 TSC_hg19_v1_chrX_+_43514289	1873282	+	TSC_hg19_v1_chrX_+_43515423 NM_000240 AK223499	1874473	+	BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##AJ278865|NYX|60506|nyctalopin##AF254868|NYX|60506|nyctalopin##NM_022567|NYX|60506|nyctalopin##AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC044787|MAOA|4128|monoamine oxidase A##NM_000240|MAOA|4128|monoamine oxidase A##AK223499|MAOA|4128|monoamine oxidase A	0.993808	CTCF.p2:3:0.994
chr17	44264439	44264553	reg1020084.p1	7.116	+	TSC_hg19_v1_chr17_+_44101553 AB073354	-162926	+	BC130319 BC130321 NM_001007532 AY179170	-187866	+	TSC_hg19_v1_chr17_+_44068829 AY526356	-195662	+	TSC_hg19_v1_chr17_-_44270149 BX538006 NM_001193466	5658	-	TSC_hg19_v1_chr17_-_44270338 BC098376 NM_015443	5813	-	AK291259 NM_001193465	38231	-	AB073354|MAPT|4137|microtubule-associated protein tau##BC130319|STH|246744|saitohin##BC130321|STH|246744|saitohin##NM_001007532|STH|246744|saitohin##AY179170|STH|246744|saitohin##AY526356|MAPT|4137|microtubule-associated protein tau##BX538006|KIAA1267|284058|KIAA1267##NM_001193466|KIAA1267|284058|KIAA1267##BC098376|KIAA1267|284058|KIAA1267##NM_015443|KIAA1267|284058|KIAA1267##AK291259|KIAA1267|284058|KIAA1267##NM_001193465|KIAA1267|284058|KIAA1267	0.538436	CTCF.p2:-5:0.538
chr6_apd_hap1	4123085	4123188	reg1019369.p2	7.116	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999672	CTCF.p2:12:1.000
chr8	72930913	72931030	reg1021480.p1	7.115	+	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-174263	-	AF060154 TSC_hg19_v1_chr8_-_72756646	-174343	-	TSC_hg19_v1_chr8_-_72756449 AF087036 AB463900 BT007169	-174532	-	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	56863	-	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	518672	+	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	990141	+	AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##AF060154|MSC|9242|musculin##AF087036|MSC|9242|musculin##BT007169|MSC|9242|musculin##NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1	0.508614	CTCF.p2:-7:0.509
chr9	75815771	75815907	reg1017680.p1	7.115	+	TSC_hg19_v1_chr9_+_75766797 BC001275	-49036	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	-49061	+	NM_000689	-247607	-	NM_006914 BC051830 Y08639	1296435	+	AY333284 NM_001177311	1686423	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	1686895	-	BC001275|ANXA1|301|annexin A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B##AY333284|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177311|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	0.954294	CTCF.p2:-42:0.954
chr2	85977725	85977858	reg1019262.p2	7.114	+	NM_006433 NM_012483 X54101 AK310057 AK311537 AK311012 AK311657 BC063245 AK304728 TSC_hg19_v1_chr2_+_85921514 DQ892267 DQ895468 BC023576 CR541859 X05044	-56311	+	NM_000542 NM_198843	-81928	-	TSC_hg19_v1_chr2_-_85888519 AB439563 AB439564 AB439565 AB439566	-89216	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	3214	+	AY152815 NM_001042437	117001	-	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	138295	-	NM_006433|GNLY|10578|granulysin##NM_012483|GNLY|10578|granulysin##X54101|GNLY|10578|granulysin##AK310057|GNLY|10578|granulysin##AK311537|GNLY|10578|granulysin##AK311012|GNLY|10578|granulysin##AK311657|GNLY|10578|granulysin##BC063245|GNLY|10578|granulysin##AK304728|GNLY|10578|granulysin##DQ892267|GNLY|10578|granulysin##DQ895468|GNLY|10578|granulysin##BC023576|GNLY|10578|granulysin##CR541859|GNLY|10578|granulysin##X05044|GNLY|10578|granulysin##NM_000542|SFTPB|6439|surfactant protein B##NM_198843|SFTPB|6439|surfactant protein B##AB439563|SFTPB|6439|surfactant protein B##AB439565|SFTPB|6439|surfactant protein B##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5	0.98597	CTCF.p2:17:0.986
chr3	85410072	85410178	reg1016482.p1	7.114	+	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	-401996	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-3374823	+	TSC_hg19_v1_chr3_-_81810971 NM_000158	-3599183	-	AF538973 NM_153184	365506	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	1630126	-	BC094780 TSC_hg19_v1_chr3_-_87040272	1630145	-	AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##NM_000158|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)	0.983705	CTCF.p2:-10:0.984
chr1	158091527	158091649	reg1014419.p1	7.113	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	-128200	+	AY302131 NM_018240	-128526	+	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	-280026	-	BC027926 NM_001766	58148	+	AK225996 TSC_hg19_v1_chr1_+_158150684 AK310541 J04142 AK310749 AB590619 CU693322	59196	+	M28825 NM_001763	132338	+	BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##AY302131|KIRREL|55243|kin of IRRE like (Drosophila)##NM_018240|KIRREL|55243|kin of IRRE like (Drosophila)##DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule##AK225996|CD1D|912|CD1d molecule##J04142|CD1D|912|CD1d molecule##AK310749|CD1D|912|CD1d molecule##M28825|CD1A|909|CD1a molecule##NM_001763|CD1A|909|CD1a molecule	0.961549	CTCF.p2:37:0.962
chr17	76441816	76441923	reg1019188.p2	7.113	+	TSC_hg19_v1_chr17_+_76374729 AK316147 AK307874 AK296882 AK024529 AK225030 AK316405 BC108732 NM_024419 BC035662 AK297156 BC008903 BC015570 BC025951	-67139	+	TSC_hg19_v1_chr17_-_76356159 AK309756 AK314212 BC060858 NM_003955	-85712	-	BC042066 NM_001204210 NM_001204211 NM_001204212 BC148207	-214406	+	NM_173628	131606	-	AK316277 TSC_hg19_v1_chr17_-_76719649	277778	-	TSC_hg19_v1_chr17_-_76719676 AK293894	277882	-	AK316147|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK307874|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK296882|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK024529|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK225030|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK316405|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC108732|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_024419|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC035662|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK297156|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC008903|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC015570|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC025951|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK309756|SOCS3|9021|suppressor of cytokine signaling 3##AK314212|SOCS3|9021|suppressor of cytokine signaling 3##BC060858|SOCS3|9021|suppressor of cytokine signaling 3##NM_003955|SOCS3|9021|suppressor of cytokine signaling 3##BC042066|TMEM235|283999|transmembrane protein 235##NM_001204210|TMEM235|283999|transmembrane protein 235##NM_001204211|TMEM235|283999|transmembrane protein 235##NM_001204212|TMEM235|283999|transmembrane protein 235##BC148207|TMEM235|283999|transmembrane protein 235##NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17##AK316277|CYTH1|9267|cytohesin 1##AK293894|CYTH1|9267|cytohesin 1	0.996963	CTCF.p2:-2:0.997
chr3	140719012	140719137	reg1019589.p1	7.113	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	-58307	+	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	-322115	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-1064822	+	TSC_hg19_v1_chr3_+_140770412 BC051354	51404	+	AF403029 BC008324 NM_080862 AK056367	51683	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	231612	+	NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2	0.995965	CTCF.p2:-8:0.996
chr4	17474059	17474207	reg1018533.p1	7.113	+	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	-573748	-	AK226029 TSC_hg19_v1_chr4_-_16900258	-573874	-	AK300119 AB463834 DQ891981 DQ895171 AK312881 TSC_hg19_v1_chr4_-_16900210 AF068651 AF047337 AF064492 AF064493 BC034019	-574007	-	AB528218 AM393718 DQ891926 DQ895113 CU674280 TSC_hg19_v1_chr4_-_17513714 X04882 BC000576 AK124382 AK296622 AK223437 AK289773 NM_000320	39633	-	BC127863 NM_001079827	42654	+	TSC_hg19_v1_chr4_+_17578852 NM_015907	104749	+	AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2##AK226029|LDB2|9079|LIM domain binding 2##AK300119|LDB2|9079|LIM domain binding 2##DQ891981|LDB2|9079|LIM domain binding 2##DQ895171|LDB2|9079|LIM domain binding 2##AK312881|LDB2|9079|LIM domain binding 2##AF068651|LDB2|9079|LIM domain binding 2##AF047337|LDB2|9079|LIM domain binding 2##AF064492|LDB2|9079|LIM domain binding 2##AF064493|LDB2|9079|LIM domain binding 2##BC034019|LDB2|9079|LIM domain binding 2##AM393718|QDPR|5860|quinoid dihydropteridine reductase##DQ891926|QDPR|5860|quinoid dihydropteridine reductase##DQ895113|QDPR|5860|quinoid dihydropteridine reductase##X04882|QDPR|5860|quinoid dihydropteridine reductase##BC000576|QDPR|5860|quinoid dihydropteridine reductase##AK124382|QDPR|5860|quinoid dihydropteridine reductase##AK296622|QDPR|5860|quinoid dihydropteridine reductase##AK223437|QDPR|5860|quinoid dihydropteridine reductase##AK289773|QDPR|5860|quinoid dihydropteridine reductase##NM_000320|QDPR|5860|quinoid dihydropteridine reductase##BC127863|CLRN2|645104|clarin 2##NM_001079827|CLRN2|645104|clarin 2##NM_015907|LAP3|51056|leucine aminopeptidase 3	0.688595	CTCF.p2:21:0.689
chr11	362004	362115	reg1018698.p1	7.111	+	TSC_hg19_v1_chr11_-_320925 X57352	-41072	-	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	-41215	-	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	-48048	+	TSC_hg19_v1_chr11_+_369724 NM_178537 AB089939 BC131528	7706	+	TSC_hg19_v1_chr11_+_394208 BC000081 NM_007183 AK025067 AK223511 Z98265	32153	+	AF053719 TSC_hg19_v1_chr11_+_394242 DQ891692 DQ894875 CU674026	32205	+	X57352|IFITM3|10410|interferon induced transmembrane protein 3##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3##J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_178537|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##AB089939|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC131528|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC000081|PKP3|11187|plakophilin 3##NM_007183|PKP3|11187|plakophilin 3##AK025067|PKP3|11187|plakophilin 3##AK223511|PKP3|11187|plakophilin 3##Z98265|PKP3|11187|plakophilin 3##AF053719|PKP3|11187|plakophilin 3##DQ891692|PKP3|11187|plakophilin 3##DQ894875|PKP3|11187|plakophilin 3	0.654434	CTCF.p2:26:0.654
chr1	147833662	147833764	reg1019236.p1	7.111	+	AL832622 TSC_hg19_v1_chr1_-_147624600	-209113	-	TSC_hg19_v1_chr1_-_147624593 BC136292 NM_183372	-209197	-	BX648497 TSC_hg19_v1_chr1_-_147624379	-209368	-	BC099898 BC071624 AK097058 AK310056 TSC_hg19_v1_chr1_-_147931936 AK310186 AK309393	98215	-	BC130376 BC130378 AB084917 NM_001143883 NM_178230	121684	-	AL117237 NM_015383 BC094705	192141	-	AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##BX648497|NBPF11|200030|neuroblastoma breakpoint family, member 11##BC071624|FLJ39739|388685|uncharacterized FLJ39739##AK097058|FLJ39739|388685|uncharacterized FLJ39739##AK310056|FLJ39739|388685|uncharacterized FLJ39739##AK310186|FLJ39739|388685|uncharacterized FLJ39739##AK309393|FLJ39739|388685|uncharacterized FLJ39739##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##AL117237|NBPF14|25832|neuroblastoma breakpoint family, member 14##NM_015383|NBPF14|25832|neuroblastoma breakpoint family, member 14##BC094705|NBPF1|55672|neuroblastoma breakpoint family, member 1	0.031854	
chr8	142398412	142398561	reg1015766.p4	7.110	+	NM_005293	-21122	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	-134296	-	AK128212 NM_001080431	-159814	-	TSC_hg19_v1_chr8_+_142402120 AK311257	3648	+	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	33575	+	BC144560 AK125848 AK131461 NM_207414	118831	-	NM_005293|GPR20|2843|G protein-coupled receptor 20##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein	0.268388	CTCF.p2:-3:0.268
chrX	150172701	150172805	reg1020399.p1	7.110	+	TSC_hg19_v1_chrX_+_150151807 BX537505 NM_005342 Y10043 BC070482	-20946	+	TSC_hg19_v1_chrX_-_150067149 BC030536 AY358837 AL136580 NM_001184808 NM_001242614 NM_031462 NM_134445 NM_134446	-105546	-	AM393605 AM393786 DQ891322 DQ894506 AK290200 TSC_hg19_v1_chrX_-_150067096 AK293244 AY078165 AY078166 AY078167 AK125020 AK291375 BC025729 AK295217	-105660	-	NM_004224 U52219 BC103696 BC105683 BC105684 EU432118 AY114101 AY114102	172446	+	TSC_hg19_v1_chrX_+_150565667 NM_001017980	392909	+	TSC_hg19_v1_chrX_+_150565686 AK096835	392927	+	BX537505|HMGB3|3149|high mobility group box 3##NM_005342|HMGB3|3149|high mobility group box 3##Y10043|HMGB3|3149|high mobility group box 3##BC070482|HMGB3|3149|high mobility group box 3##BC030536|CD99L2|83692|CD99 molecule-like 2##AY358837|CD99L2|83692|CD99 molecule-like 2##AL136580|CD99L2|83692|CD99 molecule-like 2##NM_001184808|CD99L2|83692|CD99 molecule-like 2##NM_001242614|CD99L2|83692|CD99 molecule-like 2##NM_031462|CD99L2|83692|CD99 molecule-like 2##NM_134445|CD99L2|83692|CD99 molecule-like 2##NM_134446|CD99L2|83692|CD99 molecule-like 2##AM393605|CD99L2|83692|CD99 molecule-like 2##AM393786|CD99L2|83692|CD99 molecule-like 2##DQ891322|CD99L2|83692|CD99 molecule-like 2##DQ894506|CD99L2|83692|CD99 molecule-like 2##AK290200|CD99L2|83692|CD99 molecule-like 2##AK293244|CD99L2|83692|CD99 molecule-like 2##AY078165|CD99L2|83692|CD99 molecule-like 2##AY078166|CD99L2|83692|CD99 molecule-like 2##AY078167|CD99L2|83692|CD99 molecule-like 2##AK125020|CD99L2|83692|CD99 molecule-like 2##AK291375|CD99L2|83692|CD99 molecule-like 2##BC025729|CD99L2|83692|CD99 molecule-like 2##AK295217|CD99L2|83692|CD99 molecule-like 2##NM_004224|GPR50|9248|G protein-coupled receptor 50##U52219|GPR50|9248|G protein-coupled receptor 50##BC103696|GPR50|9248|G protein-coupled receptor 50##BC105683|GPR50|9248|G protein-coupled receptor 50##BC105684|GPR50|9248|G protein-coupled receptor 50##EU432118|GPR50|9248|G protein-coupled receptor 50##AY114101|GPR50|9248|G protein-coupled receptor 50##AY114102|GPR50|9248|G protein-coupled receptor 50##NM_001017980|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AK096835|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	0.0	
chr22	39416839	39417020	reg1019244.p1	7.109	+	CR456394 TSC_hg19_v1_chr22_+_39410295 AB208979 AB590057 CU012952 CU013240	-6603	+	TSC_hg19_v1_chr22_+_39410261 AK313272 AF165520 BC011739 NM_014508 BC021080	-6678	+	AK024854 NM_004900 U61084 CT841510 AB527109 AB528064 AB528855 CU012951 CU012954 CU013239 CU013242 CU691044 AY743217 EU527884	-38498	+	NM_152426 TSC_hg19_v1_chr22_+_39417130	198	+	AK294810 NM_001006666 NM_145298	19711	+	AK092614 NM_021822 AK315650 BC061914 AF182420 CR456472 BC009683 BC024268 AB266487 AB462950 CU013022 CU013310 CU692904 JF262036	56258	+	CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AK313272|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AF165520|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC011739|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##NM_014508|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC021080|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AK024854|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##NM_004900|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##U61084|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CT841510|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012951|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012954|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##CU013239|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU013242|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AY743217|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##EU527884|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##NM_152426|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AK294810|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_001006666|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_145298|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##AK092614|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_021822|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK315650|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC061914|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AF182420|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CR456472|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC009683|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC024268|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AB266487|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013022|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013310|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##JF262036|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G	0.0	
chr7	2471251	2471379	reg1020481.p1	7.109	+	TSC_hg19_v1_chr7_+_2443245 BC095492 BC002918 BC015954 AK223191 AK223211 AK313484 AF239822 AY358574	-28072	+	TSC_hg19_v1_chr7_+_2443191 NM_001243794 NM_001243795 NM_018641	-28135	+	TSC_hg19_v1_chr7_+_2394547 BC110865	-76768	+	AK096284 NM_001166355	80847	+	BC014851 NM_002304	86181	+	TSC_hg19_v1_chr7_+_2559407 NM_001040167 NM_001040168	88122	+	BC095492|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC002918|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC015954|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK223191|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK223211|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK313484|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AF239822|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AY358574|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_001243794|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_001243795|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_018641|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC110865|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##AK096284|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166355|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC014851|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002304|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001040167|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001040168|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	0.03753	
chrX	24579396	24579513	reg1020560.p1	7.109	+	NM_001142386 NM_005391 AK301965 TSC_hg19_v1_chrX_+_24483405 BC015948 L42452 CU677533	-95997	+	NM_001136234	-198577	+	NM_001136233	-248023	-	AF148464 AF052510 TSC_hg19_v1_chrX_-_24665422	85871	-	AK315323 NM_001163265 NM_004845 TSC_hg19_v1_chrX_-_24665465	86005	-	TSC_hg19_v1_chrX_-_24690740 BC045634 AK296333 AK226121 NM_001163264	111405	-	NM_001142386|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_005391|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AK301965|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##BC015948|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##L42452|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1##NM_001136233|FAM48B2|170067|family with sequence similarity 48, member B2##AF148464|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AF052510|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AK315323|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##NM_001163265|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##NM_004845|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta	0.467583	CTCF.p2:8:0.468
chr15	37974641	37974793	reg1022377.p1	7.108	+	TSC_hg19_v1_chr15_-_37393466 BC050431 NM_001220482 NM_002399 BC001516 BC001844 BC007202 AK300247	-581275	-	TSC_hg19_v1_chr15_-_37392751 AK056216 NM_170674 NM_170675 NM_170676 NM_170677	-582161	-	TSC_hg19_v1_chr15_-_37392322 AK226072	-582386	-	BC029221 NM_152453	252739	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	569678	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	570305	+	BC050431|MEIS2|4212|Meis homeobox 2##NM_001220482|MEIS2|4212|Meis homeobox 2##NM_002399|MEIS2|4212|Meis homeobox 2##BC001516|MEIS2|4212|Meis homeobox 2##BC001844|MEIS2|4212|Meis homeobox 2##BC007202|MEIS2|4212|Meis homeobox 2##AK300247|MEIS2|4212|Meis homeobox 2##AK056216|MEIS2|4212|Meis homeobox 2##NM_170674|MEIS2|4212|Meis homeobox 2##NM_170675|MEIS2|4212|Meis homeobox 2##NM_170676|MEIS2|4212|Meis homeobox 2##NM_170677|MEIS2|4212|Meis homeobox 2##AK226072|MEIS2|4212|Meis homeobox 2##BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1	0.0	
chr6	15770631	15770804	reg1018557.p1	7.108	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-107427	-	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	-107540	-	TSC_hg19_v1_chr6_+_15249113 AK303610	-521604	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	358585	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	358720	+	TSC_hg19_v1_chr6_+_16143281 AK026739	372593	+	NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein	0.020535	
chr10	42765384	42765500	reg1021397.p1	7.107	+	TSC_hg19_v1_chr10_-_38691741 BC171738 BC042387 BC048143	-4073686	-	AK295332 AY829267 AF165514 AF165517 BC071987 TSC_hg19_v1_chr10_+_38645320 AK293968 AK307174 CU687208	-4120105	+	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	-4382159	+	TSC_hg19_v1_chr10_-_42863441 AF519622 AK131313	98021	-	AX721135 TSC_hg19_v1_chr10_-_43048257 AK308832 AK026980 BC045697 AX721116	282760	-	TSC_hg19_v1_chr10_-_43134018 BC109232 BC160932 BC065181 BC107726 BC048313 AJ491697 NM_006955 AK096683 AK309564 AK304306 BC036398	368556	-	BC171738|SEPT7L|285961|septin 7-like##BC042387|SEPT7L|285961|septin 7-like##BC048143|SEPT7L|285961|septin 7-like##AK295332|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AY829267|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165514|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165517|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC071987|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK293968|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK307174|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A##AF519622|LOC441666|441666|zinc finger protein 91 pseudogene##AK308832|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##AK026980|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC045697|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC109232|ZNF33B|7582|zinc finger protein 33B##BC160932|ZNF33B|7582|zinc finger protein 33B##BC065181|ZNF33B|7582|zinc finger protein 33B##BC107726|ZNF33B|7582|zinc finger protein 33B##BC048313|ZNF33B|7582|zinc finger protein 33B##AJ491697|ZNF33B|7582|zinc finger protein 33B##NM_006955|ZNF33B|7582|zinc finger protein 33B##AK096683|ZNF33B|7582|zinc finger protein 33B##AK309564|ZNF33B|7582|zinc finger protein 33B##AK304306|ZNF33B|7582|zinc finger protein 33B##BC036398|ZNF33B|7582|zinc finger protein 33B	0.011283	
chr17	46429301	46429416	reg1015727.p1	7.107	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-244206	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-244373	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-250537	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	78180	-	TSC_hg19_v1_chr17_-_46507604 BC039040	78259	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	178913	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.157594	
chr2	12172628	12172766	reg1019697.p2	7.107	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-285922	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-362406	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-489854	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	684556	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	685219	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	685700	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.0	
chr5	28473748	28473867	reg1019034.p1	7.107	+	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	-1001404	+	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	-1435136	-	NM_006727	-3828723	-	NM_004932 TSC_hg19_v1_chr5_+_31193792 AK291290	2719989	+	TSC_hg19_v1_chr5_+_31193875 BC000019 AK024238	2720070	+	TSC_hg19_v1_chr5_-_31532201 AK308093 AF189011 BC054003 BX647724 NM_001100412 NM_013235	3058415	-	BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK308093|DROSHA|29102|drosha, ribonuclease type III##AF189011|DROSHA|29102|drosha, ribonuclease type III##BC054003|DROSHA|29102|drosha, ribonuclease type III##BX647724|DROSHA|29102|drosha, ribonuclease type III##NM_001100412|DROSHA|29102|drosha, ribonuclease type III##NM_013235|DROSHA|29102|drosha, ribonuclease type III	0.971417	CTCF.p2:9:0.971
chrX	23926197	23926303	reg1020862.p2	7.107	+	AK058173 NM_001169574 NM_152761 BC117344 BC117346 BC144007	-84	+	TSC_hg19_v1_chrX_-_23926052 AY359114 AK311865 AF061264 BC016814 BC002333 BC010102 NM_024122	-240	-	TSC_hg19_v1_chrX_-_23855464 AK303908 D28399	-70790	-	AK057298 NM_030624	119052	-	TSC_hg19_v1_chrX_+_24073062 BC019906 NM_001415	146814	+	TSC_hg19_v1_chrX_+_24073072 AK222577 AK290397 AK312247 AB590041 CU676476 DQ891794 DQ894977 AB451230 AB451353 L19161	146828	+	AK058173|CXorf58|254158|chromosome X open reading frame 58##NM_001169574|CXorf58|254158|chromosome X open reading frame 58##NM_152761|CXorf58|254158|chromosome X open reading frame 58##BC117344|CXorf58|254158|chromosome X open reading frame 58##BC117346|CXorf58|254158|chromosome X open reading frame 58##BC144007|CXorf58|254158|chromosome X open reading frame 58##AY359114|APOO|79135|apolipoprotein O##AK311865|APOO|79135|apolipoprotein O##AF061264|APOO|79135|apolipoprotein O##BC016814|APOO|79135|apolipoprotein O##BC002333|APOO|79135|apolipoprotein O##BC010102|APOO|79135|apolipoprotein O##NM_024122|APOO|79135|apolipoprotein O##AK303908|RPL9|6133|ribosomal protein L9##AK057298|KLHL15|80311|kelch-like 15 (Drosophila)##NM_030624|KLHL15|80311|kelch-like 15 (Drosophila)##BC019906|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##NM_001415|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa	0.016912	
chr11	58864730	58864848	reg1019804.p1	7.106	+	AK091965 AX747281 DQ084381 NM_001220496 NM_080661 AK055818	-154037	+	NM_001220494 AK300479 BC008353	-169652	+	BC021682 NM_145016 BC016789	-252801	-	TSC_hg19_v1_chr11_+_58874641 BC062456 NM_001142703 NM_001142704 NM_198947 BC005998 AK304258 AY457926 AK303520	9873	+	TSC_hg19_v1_chr11_-_58910222 AK124475 BC028022	45454	-	TSC_hg19_v1_chr11_+_58910331 AK092237 AX747422 NM_001142519 NM_001142520 NM_001142521	45521	+	AK091965|GLYATL1|92292|glycine-N-acyltransferase-like 1##DQ084381|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220496|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_080661|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK055818|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC062456|FAM111B|374393|family with sequence similarity 111, member B##NM_001142703|FAM111B|374393|family with sequence similarity 111, member B##NM_001142704|FAM111B|374393|family with sequence similarity 111, member B##NM_198947|FAM111B|374393|family with sequence similarity 111, member B##BC005998|FAM111B|374393|family with sequence similarity 111, member B##AK304258|FAM111B|374393|family with sequence similarity 111, member B##AY457926|FAM111B|374393|family with sequence similarity 111, member B##AK303520|FAM111B|374393|family with sequence similarity 111, member B##AK092237|FAM111A|63901|family with sequence similarity 111, member A##NM_001142519|FAM111A|63901|family with sequence similarity 111, member A##NM_001142520|FAM111A|63901|family with sequence similarity 111, member A##NM_001142521|FAM111A|63901|family with sequence similarity 111, member A	0.996122	CTCF.p2:8:0.996
chr1	7278425	7278553	reg1018350.p2	7.106	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-432998	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-516558	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-516607	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	552887	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	565920	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	566336	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.623314	CTCF.p2:-2:0.623
chr4	109414311	109414461	reg1021523.p1	7.106	+	TSC_hg19_v1_chr4_-_109090113 AF288571 AK225772 NM_001130713 NM_001130714 NM_016269	-324587	-	TSC_hg19_v1_chr4_+_109088684 BC020624	-325702	+	AK303272 NM_001166119	-326472	-	BC106009 NM_000995 D28420 TSC_hg19_v1_chr4_+_109541732 BC070208 NM_033625 AK055920 BC001773	127380	+	AY762981 TSC_hg19_v1_chr4_+_109543670	129284	+	TSC_hg19_v1_chr4_+_109571754 NM_021227 BC054857 BC016321 AF161425 AF201937	157367	+	AF288571|LEF1|51176|lymphoid enhancer-binding factor 1##AK225772|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1##NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1##BC020624|LOC641518|641518|uncharacterized LOC641518##AK303272|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1##BC106009|RPL34|6164|ribosomal protein L34##NM_000995|RPL34|6164|ribosomal protein L34##D28420|RPL34|6164|ribosomal protein L34##BC070208|RPL34|6164|ribosomal protein L34##NM_033625|RPL34|6164|ribosomal protein L34##AK055920|RPL34|6164|ribosomal protein L34##BC001773|RPL34|6164|ribosomal protein L34##AY762981|RPL34|6164|ribosomal protein L34##NM_021227|OSTC|58505|oligosaccharyltransferase complex subunit##BC054857|OSTC|58505|oligosaccharyltransferase complex subunit##BC016321|OSTC|58505|oligosaccharyltransferase complex subunit##AF161425|OSTC|58505|oligosaccharyltransferase complex subunit##AF201937|OSTC|58505|oligosaccharyltransferase complex subunit	0.663067	CTCF.p2:24:0.663
chr5	70585999	70586144	reg1020055.p1	7.106	+	BC171860 BC171919 U21911 AF078847 NM_001515 AK296578 BX537982 BC005345	-222617	-	AB048534 NM_004536 NM_022892	-265131	-	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	-365221	+	TSC_hg19_v1_chr5_+_70751479 NM_018429 AK057871 AF176695 BC032146 AJ238520	165405	+	AF298151 AF298152 TSC_hg19_v1_chr5_+_70751649 AB051476 BC146792 AB384624 BC161615	165592	+	TSC_hg19_v1_chr5_+_70883108 BC014897 NM_022132	297036	+	BC171860|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC171919|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##U21911|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AF078847|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##NM_001515|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AK296578|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##BX537982|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##BC005345|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AB048534|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_004536|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_022892|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric##NM_018429|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AK057871|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AF176695|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC032146|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AJ238520|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AF298151|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AF298152|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AB051476|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC146792|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC161615|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC014897|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##NM_022132|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)	0.98704	CTCF.p2:-4:0.987
chr11	4572972	4573084	reg1021385.p1	7.105	+	AB463978 NM_001004137	-6610	+	BC137056 BC137059 NM_001005171	-62920	+	BC137247 BC137248 NM_001005172	-102504	+	AF439154 NM_144663 AB528787	26021	-	BC136921 BC151144 NM_001005170	34992	+	AB463977 NM_001005169	42240	+	NM_001004137|OR52M1|119772|olfactory receptor, family 52, subfamily M, member 1##BC137056|OR52K1|390036|olfactory receptor, family 52, subfamily K, member 1##BC137059|OR52K1|390036|olfactory receptor, family 52, subfamily K, member 1##NM_001005171|OR52K1|390036|olfactory receptor, family 52, subfamily K, member 1##BC137247|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##BC137248|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##NM_001005172|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##AF439154|C11orf40|143501|chromosome 11 open reading frame 40##NM_144663|C11orf40|143501|chromosome 11 open reading frame 40##BC136921|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##BC151144|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##NM_001005170|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##NM_001005169|OR52I1|390037|olfactory receptor, family 52, subfamily I, member 1	0.989388	CTCF.p2:-13:0.989
chr13	114876101	114876226	reg1022800.p1	7.105	+	TSC_hg19_v1_chr13_-_114567041 NM_000820	-309120	-	TSC_hg19_v1_chr13_-_114567037 BC030708	-309127	-	TSC_hg19_v1_chr13_-_114567011 BC038984 L13720	-309142	-	AB385165 TSC_hg19_v1_chr13_-_114898005 AK289746 X89399	21823	-	TSC_hg19_v1_chr13_-_114898028 AK295861 AK313795	21862	-	TSC_hg19_v1_chr13_-_114898058 AK128094	21903	-	NM_000820|GAS6|2621|growth arrest-specific 6##BC030708|GAS6|2621|growth arrest-specific 6##BC038984|GAS6|2621|growth arrest-specific 6##L13720|GAS6|2621|growth arrest-specific 6##AK289746|RASA3|22821|RAS p21 protein activator 3##X89399|RASA3|22821|RAS p21 protein activator 3##AK295861|RASA3|22821|RAS p21 protein activator 3##AK313795|RASA3|22821|RAS p21 protein activator 3##AK128094|RASA3|22821|RAS p21 protein activator 3	0.0	
chr18	33952949	33953100	reg1018892.p2	7.105	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	-75310	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-185548	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-243136	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	455739	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	455870	-	AB073382 TSC_hg19_v1_chr18_-_34408948	455928	-	AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.227734	
chr7	24627584	24627695	reg1016945.p1	7.105	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	-14551	+	BC029497 NM_000905 AK312156 K01911 M15789	-303796	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-877723	+	TSC_hg19_v1_chr7_-_24797042 BC099911	169398	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	169428	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	169700	-	BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5	0.908229	CTCF.p2:24:0.908
chr13	48612155	48612280	reg1019661.p2	7.104	+	TSC_hg19_v1_chr13_-_48612129 AK316271	-109	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	-403	+	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	-36766	-	AF230381 AF300618 CR457276 CR541830 DQ893076 DQ896333 TSC_hg19_v1_chr13_-_48669222	57004	-	AK223017 TSC_hg19_v1_chr13_-_48669236 AF161475	57017	-	TSC_hg19_v1_chr13_-_48669241 AK001934 AK222713 NM_014166 AK301835 BC005189	57052	-	AK316271|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF230381|MED4|29079|mediator complex subunit 4##AF300618|MED4|29079|mediator complex subunit 4##CR457276|MED4|29079|mediator complex subunit 4##CR541830|MED4|29079|mediator complex subunit 4##DQ893076|MED4|29079|mediator complex subunit 4##DQ896333|MED4|29079|mediator complex subunit 4##AK223017|MED4|29079|mediator complex subunit 4##AF161475|MED4|29079|mediator complex subunit 4##AK001934|MED4|29079|mediator complex subunit 4##AK222713|MED4|29079|mediator complex subunit 4##NM_014166|MED4|29079|mediator complex subunit 4##AK301835|MED4|29079|mediator complex subunit 4##BC005189|MED4|29079|mediator complex subunit 4	0.971683	CTCF.p2:-4:0.972
chr4	39978123	39978256	reg1016026.p1	7.104	+	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	-278385	+	TSC_hg19_v1_chr4_-_39640486 AK023351 BC008502 NM_174921 AK307146	-337633	-	TSC_hg19_v1_chr4_+_39529635 AK056558	-448563	+	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	1149	-	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	1404	-	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	80343	+	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK023351|C4orf34|201895|chromosome 4 open reading frame 34##BC008502|C4orf34|201895|chromosome 4 open reading frame 34##NM_174921|C4orf34|201895|chromosome 4 open reading frame 34##AK307146|C4orf34|201895|chromosome 4 open reading frame 34##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2	0.025966	
chr9	110228015	110228148	reg1019563.p2	7.104	+	NM_001244713 AK297986 AK316189	-180990	+	AY313777 NM_001244724 TSC_hg19_v1_chr9_+_110046392	-181715	+	TSC_hg19_v1_chr9_+_110045874 DQ890563 DQ893726 AB527553 CU676798	-182172	+	TSC_hg19_v1_chr9_-_110250732 AK095134	22639	-	HM026463 CU688792 CU689020 DQ891793 DQ894975 AB385001 TSC_hg19_v1_chr9_-_110251402 BC030811 BC029923 AK313489	23367	-	AF105036 AF022184 TSC_hg19_v1_chr9_-_110251847 U70663	23759	-	NM_001244713|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK297986|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK316189|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AY313777|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##NM_001244724|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##DQ890563|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##DQ893726|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK095134|KLF4|9314|Kruppel-like factor 4 (gut)##HM026463|KLF4|9314|Kruppel-like factor 4 (gut)##DQ891793|KLF4|9314|Kruppel-like factor 4 (gut)##DQ894975|KLF4|9314|Kruppel-like factor 4 (gut)##BC030811|KLF4|9314|Kruppel-like factor 4 (gut)##BC029923|KLF4|9314|Kruppel-like factor 4 (gut)##AK313489|KLF4|9314|Kruppel-like factor 4 (gut)##AF105036|KLF4|9314|Kruppel-like factor 4 (gut)##AF022184|KLF4|9314|Kruppel-like factor 4 (gut)##U70663|KLF4|9314|Kruppel-like factor 4 (gut)	0.562687	CTCF.p2:-37:0.563
chr1	225960133	225960254	reg1019374.p2	7.103	+	AF519769 TSC_hg19_v1_chr1_-_225840803 AY345143 AK290179 BC095481 NM_001008493 NM_018212	-119406	-	NM_194442	-343637	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	-344392	-	NM_001130440 NM_003133 TSC_hg19_v1_chr1_+_225965547 BC066957 BC008443 EF488978 AF070649 BC021995 BC106005 U20998 BC015094 AK289595 BC022415 BC045603	5339	+	TSC_hg19_v1_chr1_+_225965556 BC064351 AL050363 BC067845	5377	+	TSC_hg19_v1_chr1_+_225997796 AK313436 NM_001136018	37579	+	AF519769|ENAH|55740|enabled homolog (Drosophila)##AY345143|ENAH|55740|enabled homolog (Drosophila)##AK290179|ENAH|55740|enabled homolog (Drosophila)##BC095481|ENAH|55740|enabled homolog (Drosophila)##NM_001008493|ENAH|55740|enabled homolog (Drosophila)##NM_018212|ENAH|55740|enabled homolog (Drosophila)##NM_194442|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor##NM_001130440|SRP9|6726|signal recognition particle 9kDa##NM_003133|SRP9|6726|signal recognition particle 9kDa##BC066957|SRP9|6726|signal recognition particle 9kDa##BC008443|SRP9|6726|signal recognition particle 9kDa##EF488978|SRP9|6726|signal recognition particle 9kDa##AF070649|SRP9|6726|signal recognition particle 9kDa##BC021995|SRP9|6726|signal recognition particle 9kDa##BC106005|SRP9|6726|signal recognition particle 9kDa##U20998|SRP9|6726|signal recognition particle 9kDa##BC015094|SRP9|6726|signal recognition particle 9kDa##AK289595|SRP9|6726|signal recognition particle 9kDa##BC022415|SRP9|6726|signal recognition particle 9kDa##BC064351|SRP9|6726|signal recognition particle 9kDa##AL050363|SRP9|6726|signal recognition particle 9kDa##BC067845|SRP9|6726|signal recognition particle 9kDa##AK313436|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##NM_001136018|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	0.970649	CTCF.p2:-4:0.971
chr19	16228646	16228793	reg1020159.p1	7.103	+	AK293676 TSC_hg19_v1_chr19_+_16222706 X56741 AF498943 BT007184 CR536583 CR542274 DQ892523 DQ895735 AB209767	-5997	+	TSC_hg19_v1_chr19_+_16222683 BC002977	-6103	+	TSC_hg19_v1_chr19_+_16222463 AK025165 NM_005370	-6245	+	TSC_hg19_v1_chr19_-_16243033 AY927516	14343	-	AY319652 NM_032855	16118	+	TSC_hg19_v1_chr19_-_16250705 AK095221	21985	-	AK293676|RAB8A|4218|RAB8A, member RAS oncogene family##X56741|RAB8A|4218|RAB8A, member RAS oncogene family##AF498943|RAB8A|4218|RAB8A, member RAS oncogene family##BT007184|RAB8A|4218|RAB8A, member RAS oncogene family##CR536583|RAB8A|4218|RAB8A, member RAS oncogene family##CR542274|RAB8A|4218|RAB8A, member RAS oncogene family##DQ892523|RAB8A|4218|RAB8A, member RAS oncogene family##DQ895735|RAB8A|4218|RAB8A, member RAS oncogene family##AB209767|RAB8A|4218|RAB8A, member RAS oncogene family##BC002977|RAB8A|4218|RAB8A, member RAS oncogene family##AK025165|RAB8A|4218|RAB8A, member RAS oncogene family##NM_005370|RAB8A|4218|RAB8A, member RAS oncogene family##AY319652|HSH2D|84941|hematopoietic SH2 domain containing##NM_032855|HSH2D|84941|hematopoietic SH2 domain containing	0.699247	CTCF.p2:0:0.699
chr2	39606946	39607072	reg1019993.p1	7.103	+	AY845084 AY847283 NM_001009565 BC144460	-150305	-	TSC_hg19_v1_chr2_-_39348166 AK290228	-258850	-	L13857 AB463274 NM_005633	-259427	-	EU832785 GQ129258 AB384884 NM_003618 TSC_hg19_v1_chr2_-_39664286 AK314487	57200	-	TSC_hg19_v1_chr2_-_39664294 BC060880	57292	-	TSC_hg19_v1_chr2_-_39664420 AK291467	57377	-	AY845084|CDKL4|344387|cyclin-dependent kinase-like 4##AY847283|CDKL4|344387|cyclin-dependent kinase-like 4##NM_001009565|CDKL4|344387|cyclin-dependent kinase-like 4##BC144460|CDKL4|344387|cyclin-dependent kinase-like 4##AK290228|SOS1|6654|son of sevenless homolog 1 (Drosophila)##L13857|SOS1|6654|son of sevenless homolog 1 (Drosophila)##NM_005633|SOS1|6654|son of sevenless homolog 1 (Drosophila)##EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##AK291467|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	0.903315	CTCF.p2:-8:0.903
chr11	19345194	19345320	reg1020592.p1	7.102	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-82056	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-82782	-	U20324 U72899 U49837 BC057221 NM_001127656 TSC_hg19_v1_chr11_-_19223531 AK313289 NM_003476 AF121260	-121699	-	AB063115 NM_001111018 AJ488205	27058	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	389609	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	699131	+	AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##U20324|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U72899|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U49837|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##BC057221|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_001127656|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AK313289|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_003476|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AF121260|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2	0.080982	
chr1	161067336	161067516	reg1004958.p1	7.102	+	TSC_hg19_v1_chr1_-_161059357 NM_030916	-8058	-	AF426163 CU679709 DQ893504 DQ896483 AF160477 TSC_hg19_v1_chr1_-_161059349 BC010423 AK027753	-8208	-	TSC_hg19_v1_chr1_-_161039761 AK126116 AK126163 NM_001025598 NM_181720	-27667	-	TSC_hg19_v1_chr1_+_161068152 BC032482 NM_001007255 NM_152366 AY601914 BC022077 BC066896 AK093268 AX748022	744	+	AB464064 CU680334 AF151065 AF117237 TSC_hg19_v1_chr1_-_161087828 BC047042 AF165883 AK024531 BC012464 AK315736	20399	-	TSC_hg19_v1_chr1_-_161087839 NM_012394	20426	-	NM_030916|PVRL4|81607|poliovirus receptor-related 4##AF426163|PVRL4|81607|poliovirus receptor-related 4##DQ893504|PVRL4|81607|poliovirus receptor-related 4##DQ896483|PVRL4|81607|poliovirus receptor-related 4##AF160477|PVRL4|81607|poliovirus receptor-related 4##BC010423|PVRL4|81607|poliovirus receptor-related 4##AK027753|PVRL4|81607|poliovirus receptor-related 4##AK126116|ARHGAP30|257106|Rho GTPase activating protein 30##AK126163|ARHGAP30|257106|Rho GTPase activating protein 30##NM_001025598|ARHGAP30|257106|Rho GTPase activating protein 30##NM_181720|ARHGAP30|257106|Rho GTPase activating protein 30##BC032482|KLHDC9|126823|kelch domain containing 9##NM_001007255|KLHDC9|126823|kelch domain containing 9##NM_152366|KLHDC9|126823|kelch domain containing 9##AY601914|KLHDC9|126823|kelch domain containing 9##BC022077|KLHDC9|126823|kelch domain containing 9##BC066896|KLHDC9|126823|kelch domain containing 9##AK093268|KLHDC9|126823|kelch domain containing 9##AF151065|PFDN2|5202|prefoldin subunit 2##AF117237|PFDN2|5202|prefoldin subunit 2##BC047042|PFDN2|5202|prefoldin subunit 2##AF165883|PFDN2|5202|prefoldin subunit 2##AK024531|PFDN2|5202|prefoldin subunit 2##BC012464|PFDN2|5202|prefoldin subunit 2##AK315736|PFDN2|5202|prefoldin subunit 2##NM_012394|PFDN2|5202|prefoldin subunit 2	0.0	
chr12	20275342	20275459	reg1018925.p1	7.102	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-682212	+	TSC_hg19_v1_chr12_+_19592783 AB209384	-682605	+	TSC_hg19_v1_chr12_+_19592425 AK131361 NM_001114176 NM_153207 AK126973 BC022220	-682881	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	246798	+	AK308317 NM_001244683	449397	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	573095	+	BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##AK131361|AEBP2|121536|AE binding protein 2##NM_001114176|AEBP2|121536|AE binding protein 2##NM_153207|AEBP2|121536|AE binding protein 2##AK126973|AEBP2|121536|AE binding protein 2##BC022220|AEBP2|121536|AE binding protein 2##BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	0.0	
chrX	123345306	123345451	reg1018541.p1	7.102	+	AK026678 TSC_hg19_v1_chrX_+_123234596	-110848	+	TSC_hg19_v1_chrX_+_123095638 BC001765	-249741	+	NM_001042750 NM_001042751 NM_006603 TSC_hg19_v1_chrX_+_123095573 AL831939 BX641002 CR749433 BX641003	-249805	+	NM_001114937 NM_002351 AL023657 AK311645	134797	+	HE578281 BC140783 BC144542 BC144543 AF100772 NM_001163278 NM_001163279 NM_014253	752255	-	NM_001195272	1108590	+	AK026678|STAG2|10735|stromal antigen 2##BC001765|STAG2|10735|stromal antigen 2##NM_001042750|STAG2|10735|stromal antigen 2##NM_001042751|STAG2|10735|stromal antigen 2##NM_006603|STAG2|10735|stromal antigen 2##AL831939|STAG2|10735|stromal antigen 2##BX641002|STAG2|10735|stromal antigen 2##CR749433|STAG2|10735|stromal antigen 2##BX641003|STAG2|10735|stromal antigen 2##NM_001114937|SH2D1A|4068|SH2 domain containing 1A##NM_002351|SH2D1A|4068|SH2 domain containing 1A##AL023657|SH2D1A|4068|SH2 domain containing 1A##AK311645|SH2D1A|4068|SH2 domain containing 1A##BC140783|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144542|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144543|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##AF100772|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163278|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163279|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_014253|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001195272|LOC100129520|100129520|testis expressed sequence 13-like	0.997872	CTCF.p2:-7:0.998
chr10	62900655	62900836	reg1019400.p2	7.101	+	AK075129 BC093035 TSC_hg19_v1_chr10_-_62761269	-139505	-	BC041791 AB018283 BC032848 TSC_hg19_v1_chr10_-_62704033 NM_001242359 NM_014836 AK307630	-196793	-	TSC_hg19_v1_chr10_+_62538253 BC107750 AK291939	-362474	+	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	312214	-	CR749606 NM_178505	312462	-	BC041932 NM_173554	521973	+	AK075129|RHOBTB1|9886|Rho-related BTB domain containing 1##BC093035|RHOBTB1|9886|Rho-related BTB domain containing 1##BC041791|RHOBTB1|9886|Rho-related BTB domain containing 1##AB018283|RHOBTB1|9886|Rho-related BTB domain containing 1##BC032848|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_001242359|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_014836|RHOBTB1|9886|Rho-related BTB domain containing 1##AK307630|RHOBTB1|9886|Rho-related BTB domain containing 1##BC107750|CDK1|983|cyclin-dependent kinase 1##AK291939|CDK1|983|cyclin-dependent kinase 1##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26##CR749606|TMEM26|219623|transmembrane protein 26##NM_178505|TMEM26|219623|transmembrane protein 26##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107	0.328196	CTCF.p2:-10:0.328
chr1	20543261	20543372	reg1020450.p1	7.101	+	BC047428 NM_152376 BX648631 AK058158 TSC_hg19_v1_chr1_+_20512591	-30732	+	NM_001105572	-41630	-	TSC_hg19_v1_chr1_+_20480706 BC041651	-62553	+	NM_001039500 AK125833	74104	+	AY204901 TSC_hg19_v1_chr1_-_20812323	268982	-	NM_018584 TSC_hg19_v1_chr1_-_20812743	269465	-	BC047428|UBXN10|127733|UBX domain protein 10##NM_152376|UBXN10|127733|UBX domain protein 10##BX648631|UBXN10|127733|UBX domain protein 10##AK058158|UBXN10|127733|UBX domain protein 10##NM_001105572|PLA2G2C|391013|phospholipase A2, group IIC##NM_001039500|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AK125833|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AY204901|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##NM_018584|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1	0.0	
chr12	3150867	3150981	reg1019953.p2	7.100	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-81863	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-82330	+	TSC_hg19_v1_chr12_+_3000056 AK024246 NM_001160408 NM_003324 AK293285 AK307434 AF045583 BC032587 CU689434 AB464323 EU446713	-150871	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	35638	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	449517	+	AK125333 TSC_hg19_v1_chr12_-_3601984	451061	-	BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AK024246|TULP3|7289|tubby like protein 3##NM_001160408|TULP3|7289|tubby like protein 3##NM_003324|TULP3|7289|tubby like protein 3##AK293285|TULP3|7289|tubby like protein 3##AK307434|TULP3|7289|tubby like protein 3##AF045583|TULP3|7289|tubby like protein 3##BC032587|TULP3|7289|tubby like protein 3##EU446713|TULP3|7289|tubby like protein 3##NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223	0.998962	CTCF.p2:-17:0.999
chr2	3875349	3875481	reg1020157.p2	7.100	+	AK302299 NM_018436 BC029652	-169618	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-232846	+	X74803 TSC_hg19_v1_chr2_+_3627765	-247670	+	U23752 AB028641 NM_003108 BC025789 AB464713	1957400	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	3130485	-	TSC_hg19_v1_chr2_-_7006650 AK308509	3131288	-	AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##X74803|RPS7|6201|ribosomal protein S7##U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	0.95068	CTCF.p2:5:0.951
chr4	163090255	163090384	reg1019851.p1	7.100	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	-5168	-	AK294459 NM_014247	-2901322	+	AK058100 NM_152543	-3133987	-	TSC_hg19_v1_chr4_-_164088002 AK097352	997673	-	TSC_hg19_v1_chr4_-_164088043 AK308601	997718	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	997759	-	AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.0	
chr11	66636309	66636431	reg1019641.p1	7.099	+	NM_024036 BC015581 BC007718	-11435	+	TSC_hg19_v1_chr11_+_66624583 BC071866	-11822	+	AF121951 NM_001032279 NM_005133 BC093726 BC093728 TSC_hg19_v1_chr11_+_66610911 BC052622 Y13835	-25465	+	TSC_hg19_v1_chr11_-_66639602 AB527412 CU679988	3245	-	U30891 NM_022172 TSC_hg19_v1_chr11_-_66675385 S72370 U30890	39010	-	TSC_hg19_v1_chr11_-_66725855 BC011617 AK297705 NM_000920 NM_001040716	89478	-	NM_024036|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4##BC015581|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4##BC007718|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4##BC071866|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4##AF121951|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##NM_001032279|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##NM_005133|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##BC093726|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##BC093728|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##BC052622|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##Y13835|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##U30891|PC|5091|pyruvate carboxylase##NM_022172|PC|5091|pyruvate carboxylase##S72370|PC|5091|pyruvate carboxylase##U30890|PC|5091|pyruvate carboxylase##BC011617|PC|5091|pyruvate carboxylase##AK297705|PC|5091|pyruvate carboxylase##NM_000920|PC|5091|pyruvate carboxylase##NM_001040716|PC|5091|pyruvate carboxylase	0.61485	CTCF.p2:-19:0.615
chr12	105035713	105035854	reg1020036.p1	7.099	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-184696	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-184975	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-185012	+	TSC_hg19_v1_chr12_+_105153261 AF131762	117494	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	286480	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	344307	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.199437	
chr13	62455095	62455209	reg1020520.p1	7.099	+	AK289924 NM_022843	-465498	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-465899	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-1483673	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	5349352	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	8227389	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	9985107	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	1.014109	CTCF.p2:-18:1.000
chr18	32368030	32368145	reg1018676.p1	7.099	+	NM_001390 NM_001391 AB463020 BT006937 EU831587 EU831619 EU831672 EU831705	-32148	+	NM_001198941 NM_032978 TSC_hg19_v1_chr18_+_32290229 AK291156	-77841	+	NM_001128175 NM_001198938 NM_001198939 NM_001198940 AK308410 AL833285 BC005300 AB209102	-194783	+	AK296450 NM_001198943	29838	+	FJ535564 FJ535565 NM_001198942 NM_001198944 NM_032980 NM_032981 AK295732 U46746 AK295789 U26743 AK315215	30231	+	NM_001143826 TSC_hg19_v1_chr18_+_32557008	188872	+	NM_001390|DTNA|1837|dystrobrevin, alpha##NM_001391|DTNA|1837|dystrobrevin, alpha##BT006937|DTNA|1837|dystrobrevin, alpha##EU831587|DTNA|1837|dystrobrevin, alpha##EU831619|DTNA|1837|dystrobrevin, alpha##EU831672|DTNA|1837|dystrobrevin, alpha##EU831705|DTNA|1837|dystrobrevin, alpha##NM_001198941|DTNA|1837|dystrobrevin, alpha##NM_032978|DTNA|1837|dystrobrevin, alpha##AK291156|DTNA|1837|dystrobrevin, alpha##NM_001128175|DTNA|1837|dystrobrevin, alpha##NM_001198938|DTNA|1837|dystrobrevin, alpha##NM_001198939|DTNA|1837|dystrobrevin, alpha##NM_001198940|DTNA|1837|dystrobrevin, alpha##AK308410|DTNA|1837|dystrobrevin, alpha##AL833285|DTNA|1837|dystrobrevin, alpha##BC005300|DTNA|1837|dystrobrevin, alpha##AB209102|DTNA|1837|dystrobrevin, alpha##AK296450|DTNA|1837|dystrobrevin, alpha##NM_001198943|DTNA|1837|dystrobrevin, alpha##FJ535564|DTNA|1837|dystrobrevin, alpha##FJ535565|DTNA|1837|dystrobrevin, alpha##NM_001198942|DTNA|1837|dystrobrevin, alpha##NM_001198944|DTNA|1837|dystrobrevin, alpha##NM_032980|DTNA|1837|dystrobrevin, alpha##NM_032981|DTNA|1837|dystrobrevin, alpha##AK295732|DTNA|1837|dystrobrevin, alpha##U46746|DTNA|1837|dystrobrevin, alpha##AK295789|DTNA|1837|dystrobrevin, alpha##U26743|DTNA|1837|dystrobrevin, alpha##AK315215|DTNA|1837|dystrobrevin, alpha##NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2	0.996965	CTCF.p2:14:0.997
chr20	61922717	61922834	reg1018571.p1	7.099	+	AK123367 TSC_hg19_v1_chr20_+_61915676	-7100	+	TSC_hg19_v1_chr20_+_61904184 BC000786 BC011876 BC006085 AK223427 BC028233	-18576	+	TSC_hg19_v1_chr20_+_61904164 AK001629 AK296351 NM_018209 NM_175609 AK303454	-18613	+	BC043183 NM_020882 BC041767	1781	+	X89741 Y08421 AB590558 AK314907 TSC_hg19_v1_chr20_-_61992648 BC096290 BC096291 BC096292 BC096293 L35901 NM_000744 U62433	69856	-	BT007043 AB527167 Y15065 BC000699 AF110020 TSC_hg19_v1_chr20_-_62104002 AK293727 AF033348 AF074247 D82346 NM_004518 NM_172106 NM_172107 NM_172108 NM_172109	181154	-	AK123367|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##BC000786|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##BC011876|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##BC006085|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##AK223427|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##BC028233|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##AK001629|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##AK296351|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##NM_018209|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##NM_175609|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##AK303454|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##BC043183|COL20A1|57642|collagen, type XX, alpha 1##NM_020882|COL20A1|57642|collagen, type XX, alpha 1##BC041767|COL20A1|57642|collagen, type XX, alpha 1##X89741|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##Y08421|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##AK314907|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096290|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096291|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096292|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096293|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##L35901|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##NM_000744|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##U62433|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BT007043|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##Y15065|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##BC000699|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF110020|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AK293727|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF033348|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF074247|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##D82346|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_004518|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172106|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172107|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172108|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172109|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2	0.967659	CTCF.p2:0:0.968
chr2	41926060	41926190	reg1017512.p1	7.099	+	Y12878 Y12885 AK291696 BX537482 NM_001112802	-1186553	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	-1246903	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-1268694	-	AK124893 NM_001242815	254817	-	TSC_hg19_v1_chr2_+_42275160 NM_138370	349007	+	AB528999 TSC_hg19_v1_chr2_+_42275979	349836	+	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)	0.99908	CTCF.p2:10:0.999
chr3	57896870	57896971	reg1018885.p1	7.099	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-153718	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-218181	-	TSC_hg19_v1_chr3_-_57583171 NM_001660	-313730	-	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	97227	+	NM_004944	303477	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	326363	+	AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_001660|ARF4|378|ADP-ribosylation factor 4##AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6	0.959639	CTCF.p2:0:0.960
chr19	1788978	1789068	reg1020577.p1	7.098	+	TSC_hg19_v1_chr19_+_1776120 AK074606	-12836	+	NM_001080488 TSC_hg19_v1_chr19_+_1753823	-35271	+	M31222 NM_003200 TSC_hg19_v1_chr19_-_1652346	-136684	-	AY302538 NM_001178002 TSC_hg19_v1_chr19_-_1812276 BC035162 NM_138813 AK125225 AK125969	23214	-	AB384122 TSC_hg19_v1_chr19_-_1848439 AB032964 BC016923	59378	-	TSC_hg19_v1_chr19_-_1848471 BC032244 NM_020695	59438	-	NM_001080488|ONECUT3|390874|one cut homeobox 3##M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##AY302538|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001178002|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##BC035162|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_138813|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125225|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125969|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AB032964|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC016923|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC032244|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##NM_020695|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)	0.860612	CTCF.p2:-1:0.861
chr1	47898173	47898298	reg1019324.p1	7.097	+	AF275722 NM_012186	-16492	+	TSC_hg19_v1_chr1_+_47799646 AF259961	-98594	+	TSC_hg19_v1_chr1_+_47799615 BC017806 AF087865 AF112216 AF110643 AK223014 AK294294 AK298502 AF070416 AK025258 AK293238 AK312693 BC014961 AB528698 DQ892213 DQ895408 DQ895409	-98683	+	AF042832 NM_004474	3453	+	NM_001194986	564326	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	790157	+	AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##BC017806|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF087865|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF112216|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF110643|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK223014|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK294294|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK298502|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF070416|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK025258|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK293238|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AK312693|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##BC014961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##DQ892213|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##DQ895408|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##DQ895409|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##NM_001194986|LOC388630|388630|UPF0632 protein A##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9	0.413119	CTCF.p2:-1:0.413
chr19	17346487	17346619	reg1021645.p1	7.097	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	-9519	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	-20348	+	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	-20381	+	AB307712 AB463945 AK298764 HQ692851 TSC_hg19_v1_chr19_-_17356214 BC063018 BC084544 BC002669 NM_005234 AK314961	9587	-	AB026290 AB040046 AK300617 AK096028 BC027910 NM_031941 AK315239 AK292031	28994	-	TSC_hg19_v1_chr19_+_17378251 AK308590 AK299493 NM_001033549 NM_014173 AF161491 AK025970 AK301193 BC006244 AL136692 AK225047	31652	+	BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB307712|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AK298764|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##HQ692851|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC063018|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC084544|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC002669|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##NM_005234|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AK314961|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1##AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1##AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1##AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1##BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1##NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1##AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1##AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1##AK308590|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK299493|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_001033549|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_014173|BABAM1|29086|BRISC and BRCA1 A complex member 1##AF161491|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK025970|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK301193|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC006244|BABAM1|29086|BRISC and BRCA1 A complex member 1##AL136692|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK225047|BABAM1|29086|BRISC and BRCA1 A complex member 1	0.311815	CTCF.p2:3:0.312
chr9	135853158	135853307	reg1018173.p1	7.097	+	TSC_hg19_v1_chr9_-_135820004 AK303030 AK308412 AK297326 AF013168 BC108668 AK299654 BC070032 NM_000368 NM_001162426 NM_001162427	-33223	-	TSC_hg19_v1_chr9_-_135819985 BC121000 AB190910 BC047772	-33259	-	AK075259 AJ011375 NM_018956	-98946	+	AY428733 NM_001135031 NM_004188	865	+	TSC_hg19_v1_chr9_+_135894809 BC070500	41575	+	NM_001122823 NM_012087 TSC_hg19_v1_chr9_+_135906094 AK225761 AK311481 AK055092 AF133124 BC011355 BC017337	52867	+	AK303030|TSC1|7248|tuberous sclerosis 1##AK308412|TSC1|7248|tuberous sclerosis 1##AK297326|TSC1|7248|tuberous sclerosis 1##AF013168|TSC1|7248|tuberous sclerosis 1##BC108668|TSC1|7248|tuberous sclerosis 1##AK299654|TSC1|7248|tuberous sclerosis 1##BC070032|TSC1|7248|tuberous sclerosis 1##NM_000368|TSC1|7248|tuberous sclerosis 1##NM_001162426|TSC1|7248|tuberous sclerosis 1##NM_001162427|TSC1|7248|tuberous sclerosis 1##BC121000|TSC1|7248|tuberous sclerosis 1##AB190910|TSC1|7248|tuberous sclerosis 1##BC047772|TSC1|7248|tuberous sclerosis 1##AK075259|C9orf9|11092|chromosome 9 open reading frame 9##AJ011375|C9orf9|11092|chromosome 9 open reading frame 9##NM_018956|C9orf9|11092|chromosome 9 open reading frame 9##AY428733|GFI1B|8328|growth factor independent 1B transcription repressor##NM_001135031|GFI1B|8328|growth factor independent 1B transcription repressor##NM_004188|GFI1B|8328|growth factor independent 1B transcription repressor##BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##NM_001122823|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_012087|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK225761|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK311481|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK055092|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF133124|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC011355|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC017337|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa	0.999915	CTCF.p2:-16:1.000
chrX	111975111	111975236	reg1019157.p1	7.097	+	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	-51834	-	AK128465 NM_001004308	-648921	+	AF054568 NM_012471	-649170	-	AB384557 AY987378 NM_001113490	91180	-	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	108889	-	NM_000868 U49516 BC028688 AK295753 TSC_hg19_v1_chrX_+_113818558 M81778	1843399	+	BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK128465|ZCCHC16|340595|zinc finger, CCHC domain containing 16##NM_001004308|ZCCHC16|340595|zinc finger, CCHC domain containing 16##AF054568|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##NM_012471|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin##NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C	0.385	CTCF.p2:37:0.385
chr1	110042680	110042792	reg1019165.p1	7.096	+	NM_001134402 AK126707 NM_001134400 NM_001134403 NM_001134404 NM_182580 TSC_hg19_v1_chr1_+_110036712 AK299086 BX647509 AK096354 AK303546 BC093683 BC111999 BC143308 AK294992 AK128798	-6040	+	TSC_hg19_v1_chr1_+_110026580 BC036849 NM_153340	-16190	+	TSC_hg19_v1_chr1_+_110009222 AK293082	-33515	+	TSC_hg19_v1_chr1_-_110052350 BC040879 AK295678 NM_020703	9598	-	AK290027 NM_031936 AF258342	39764	+	NM_006496 TSC_hg19_v1_chr1_+_110091203	48464	+	NM_001134402|CYB561D1|284613|cytochrome b-561 domain containing 1##AK126707|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134400|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134403|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134404|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_182580|CYB561D1|284613|cytochrome b-561 domain containing 1##AK299086|CYB561D1|284613|cytochrome b-561 domain containing 1##BX647509|CYB561D1|284613|cytochrome b-561 domain containing 1##AK096354|CYB561D1|284613|cytochrome b-561 domain containing 1##AK303546|CYB561D1|284613|cytochrome b-561 domain containing 1##BC093683|CYB561D1|284613|cytochrome b-561 domain containing 1##BC111999|CYB561D1|284613|cytochrome b-561 domain containing 1##BC143308|CYB561D1|284613|cytochrome b-561 domain containing 1##AK294992|CYB561D1|284613|cytochrome b-561 domain containing 1##AK128798|CYB561D1|284613|cytochrome b-561 domain containing 1##BC036849|ATXN7L2|127002|ataxin 7-like 2##NM_153340|ATXN7L2|127002|ataxin 7-like 2##AK293082|SYPL2|284612|synaptophysin-like 2##BC040879|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK295678|AMIGO1|57463|adhesion molecule with Ig-like domain 1##NM_020703|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK290027|GPR61|83873|G protein-coupled receptor 61##NM_031936|GPR61|83873|G protein-coupled receptor 61##AF258342|GPR61|83873|G protein-coupled receptor 61##NM_006496|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3	0.958612	CTCF.p2:-7:0.959
chr2	182168759	182168902	reg1015719.p1	7.095	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-323003	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-323187	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-323460	+	NM_000885	152788	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	153220	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	153492	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.117436	
chr8	29348078	29348258	reg1019107.p2	7.095	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-140098	-	AL137704 NM_057158	-141847	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-227554	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	592306	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	592404	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	604775	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chr1	249200626	249200720	reg1018397.p2	7.094	+	TSC_hg19_v1_chr1_+_249200433 AK123219 BC063785 NM_001017434 NM_170725 BX647065 AK298248	-250	+	TSC_hg19_v1_chr1_-_249153285 NM_001193328 NM_017865	-47371	-	AK309421 AL133100 TSC_hg19_v1_chr1_-_249153150 AK302187 NM_001136036 AK001070 AK298899 BC002948 AK000538 AK225535	-47585	-	None	None	None	None	None	None	None	None	None	AK123219|PGBD2|267002|piggyBac transposable element derived 2##BC063785|PGBD2|267002|piggyBac transposable element derived 2##NM_001017434|PGBD2|267002|piggyBac transposable element derived 2##NM_170725|PGBD2|267002|piggyBac transposable element derived 2##BX647065|PGBD2|267002|piggyBac transposable element derived 2##AK298248|PGBD2|267002|piggyBac transposable element derived 2##NM_001193328|ZNF692|55657|zinc finger protein 692##NM_017865|ZNF692|55657|zinc finger protein 692##AK309421|ZNF692|55657|zinc finger protein 692##AL133100|ZNF692|55657|zinc finger protein 692##AK302187|ZNF692|55657|zinc finger protein 692##NM_001136036|ZNF692|55657|zinc finger protein 692##AK001070|ZNF692|55657|zinc finger protein 692##AK298899|ZNF692|55657|zinc finger protein 692##BC002948|ZNF692|55657|zinc finger protein 692##AK000538|ZNF692|55657|zinc finger protein 692##AK225535|ZNF692|55657|zinc finger protein 692	0.978139	CTCF.p2:42:0.978
chr13	60345536	60345663	reg1021552.p1	7.094	+	BC041395 TSC_hg19_v1_chr13_-_60325215	-20455	-	TSC_hg19_v1_chr13_+_58207858 AK307545	-2137703	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	-2139652	+	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	241721	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	392382	-	TSC_hg19_v1_chr13_-_60738096 NM_001042517	392502	-	AK307545|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	0.805284	CTCF.p2:9:0.805
chr2	21645089	21645208	reg1018308.p1	7.093	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-378219	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-378249	-	TSC_hg19_v1_chr2_-_21266818 AB587530 HM487065 M14081 M14162 BC051278	-378327	-	NM_052920	1963149	+	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	2504798	-	TSC_hg19_v1_chr2_+_24150144 BC037901	2505009	+	AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##HM487065|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14081|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14162|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC051278|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A	0.993263	CTCF.p2:-26:0.993
chr3	70113475	70113631	reg1020341.p1	7.093	+	TSC_hg19_v1_chr3_+_70048883 BC015590	-64665	+	NM_000248 NM_001184968 NM_198158 NM_198178 Z29678 BC012503 BC065243 BC026961 GU355676	-127742	+	NM_198177 AB006989 AK297858	-198152	+	TSC_hg19_v1_chr3_-_71114076 AK074569 NM_001244813	1000643	-	TSC_hg19_v1_chr3_-_71179732 AK027264	1066170	-	AK297649 TSC_hg19_v1_chr3_-_71179738 BX647682	1066187	-	NM_000248|MITF|4286|microphthalmia-associated transcription factor##NM_001184968|MITF|4286|microphthalmia-associated transcription factor##NM_198158|MITF|4286|microphthalmia-associated transcription factor##NM_198178|MITF|4286|microphthalmia-associated transcription factor##Z29678|MITF|4286|microphthalmia-associated transcription factor##BC012503|MITF|4286|microphthalmia-associated transcription factor##BC065243|MITF|4286|microphthalmia-associated transcription factor##BC026961|MITF|4286|microphthalmia-associated transcription factor##GU355676|MITF|4286|microphthalmia-associated transcription factor##NM_198177|MITF|4286|microphthalmia-associated transcription factor##AB006989|MITF|4286|microphthalmia-associated transcription factor##AK297858|MITF|4286|microphthalmia-associated transcription factor##AK074569|FOXP1|27086|forkhead box P1##NM_001244813|FOXP1|27086|forkhead box P1##AK027264|FOXP1|27086|forkhead box P1##AK297649|FOXP1|27086|forkhead box P1##BX647682|FOXP1|27086|forkhead box P1	0.968669	CTCF.p2:-25:0.969
chr4	48908816	48908935	reg1019856.p1	7.093	+	TSC_hg19_v1_chr4_-_48908795 CR749310 BC032808 AK298305 NM_001014446 NM_152398	-96	-	TSC_hg19_v1_chr4_+_48833104 NM_001079840 NM_001079841 NM_017830 AK297864 AF323665 AF324350 AK000462 BC003409 NM_001079839 NM_001079842 NM_001168254 BC088361	-75624	+	TSC_hg19_v1_chr4_-_48782286 BC040987 BC050336 NM_015030	-126577	-	AK025164 NM_025087 BC137387 BC137388	79397	+	AK124346 NM_001040402 NM_015115 TSC_hg19_v1_chr4_+_52709318 BC053897 AK294896 BX537944 AK027051 D87466 BC041702 AM392554 AM392637 AM392729 AM393240	3800411	+	CR749811 NM_001024611	3974910	-	CR749310|OCIAD2|132299|OCIA domain containing 2##BC032808|OCIAD2|132299|OCIA domain containing 2##AK298305|OCIAD2|132299|OCIA domain containing 2##NM_001014446|OCIAD2|132299|OCIA domain containing 2##NM_152398|OCIAD2|132299|OCIA domain containing 2##NM_001079840|OCIAD1|54940|OCIA domain containing 1##NM_001079841|OCIAD1|54940|OCIA domain containing 1##NM_017830|OCIAD1|54940|OCIA domain containing 1##AK297864|OCIAD1|54940|OCIA domain containing 1##AF323665|OCIAD1|54940|OCIA domain containing 1##AF324350|OCIAD1|54940|OCIA domain containing 1##AK000462|OCIAD1|54940|OCIA domain containing 1##BC003409|OCIAD1|54940|OCIA domain containing 1##NM_001079839|OCIAD1|54940|OCIA domain containing 1##NM_001079842|OCIAD1|54940|OCIA domain containing 1##NM_001168254|OCIAD1|54940|OCIA domain containing 1##BC088361|OCIAD1|54940|OCIA domain containing 1##BC040987|FRYL|285527|FRY-like##BC050336|FRYL|285527|FRY-like##NM_015030|FRYL|285527|FRY-like##AK025164|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##NM_025087|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137387|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137388|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##CR749811|LRRC66|339977|leucine rich repeat containing 66##NM_001024611|LRRC66|339977|leucine rich repeat containing 66	0.756288	CTCF.p2:13:0.756
chr12	112608285	112608432	reg1020303.p1	7.092	+	TSC_hg19_v1_chr12_+_112563363 AK122620 AK291331 AK295474 AB007447	-44967	+	TSC_hg19_v1_chr12_+_112563341 AK309916 AK312601 NM_001143906 NM_006700	-45036	+	TSC_hg19_v1_chr12_-_112546588 BC065481 AB054990 AK309772 AK307494 BC095484 BX647450 BC034357 BX641140 AK292485 BC113585 BC113587 NM_024953	-61760	-	TSC_hg19_v1_chr12_-_112630525 AF174498	22170	-	TSC_hg19_v1_chr12_-_112819755 NM_001109662	211467	-	TSC_hg19_v1_chr12_-_112847411 BC022444 X69391 BC004138 BC104824 BC104826 AK308680 NM_000970 NM_001024662	239047	-	AK122620|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK291331|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK295474|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AB007447|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK309916|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK312601|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_001143906|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_006700|TRAFD1|10906|TRAF-type zinc finger domain containing 1##BC065481|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##AB054990|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##AK309772|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##AK307494|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##BC095484|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##BX647450|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##BC034357|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##BX641140|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##AK292485|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##BC113585|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##BC113587|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##NM_024953|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##AF174498|C12orf51|283450|chromosome 12 open reading frame 51##NM_001109662|C12orf51|283450|chromosome 12 open reading frame 51##BC022444|RPL6|6128|ribosomal protein L6##X69391|RPL6|6128|ribosomal protein L6##BC004138|RPL6|6128|ribosomal protein L6##BC104824|RPL6|6128|ribosomal protein L6##BC104826|RPL6|6128|ribosomal protein L6##NM_000970|RPL6|6128|ribosomal protein L6##NM_001024662|RPL6|6128|ribosomal protein L6	0.429496	CTCF.p2:3:0.290
chr19	28558859	28559035	reg1018881.p1	7.092	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-274019	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-274114	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-274559	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	1145113	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	1145174	-	NM_001146339	1458543	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.0	
chr19	56764288	56764436	reg1023345.p1	7.092	+	BC002636 NM_024303 AK098700	-24694	-	NM_001080456	-59942	-	AF188492 AF188493 NM_001145546 NM_033106	-76974	+	BX647919 AK097128 TSC_hg19_v1_chr19_+_56879704 AL833621 BC064603 BC089419	115354	+	TSC_hg19_v1_chr19_-_56904904 AK055489 NM_144690 AK299036 BC056238 AK316028	140530	-	NM_001159860	151020	+	BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_001080456|ZSCAN5B|342933|zinc finger and SCAN domain containing 5B##AF188492|GALP|85569|galanin-like peptide##AF188493|GALP|85569|galanin-like peptide##NM_001145546|GALP|85569|galanin-like peptide##NM_033106|GALP|85569|galanin-like peptide##BX647919|ZNF542|147947|zinc finger protein 542##AK097128|ZNF542|147947|zinc finger protein 542##AL833621|ZNF542|147947|zinc finger protein 542##BC064603|ZNF542|147947|zinc finger protein 542##BC089419|ZNF542|147947|zinc finger protein 542##AK055489|ZNF582|147948|zinc finger protein 582##NM_144690|ZNF582|147948|zinc finger protein 582##AK299036|ZNF582|147948|zinc finger protein 582##BC056238|ZNF582|147948|zinc finger protein 582##AK316028|ZNF582|147948|zinc finger protein 582##NM_001159860|ZNF583|147949|zinc finger protein 583	0.105608	
chr2	113837764	113837896	reg1019616.p1	7.092	+	AF334755 NM_032556	-7936	+	AY029413 NM_173161 BC103966 BC103967 BC103968 AY358846	-12278	+	AF186094 NM_012275 AJ242737 AK290249 AY359117	-21094	+	AF043143 NM_000577 NM_173841 NM_173843 M55646 AK290898 X84348 BC009745	37687	+	NM_173842 TSC_hg19_v1_chr2_+_113885141	47309	+	TSC_hg19_v1_chr2_+_113885174 AK290926 X52015 X53296 AB529162	47374	+	AF334755|IL1F10|84639|interleukin 1 family, member 10 (theta)##NM_032556|IL1F10|84639|interleukin 1 family, member 10 (theta)##AY029413|IL1F10|84639|interleukin 1 family, member 10 (theta)##NM_173161|IL1F10|84639|interleukin 1 family, member 10 (theta)##BC103966|IL1F10|84639|interleukin 1 family, member 10 (theta)##BC103967|IL1F10|84639|interleukin 1 family, member 10 (theta)##BC103968|IL1F10|84639|interleukin 1 family, member 10 (theta)##AY358846|IL1F10|84639|interleukin 1 family, member 10 (theta)##AF186094|IL36RN|26525|interleukin 36 receptor antagonist##NM_012275|IL36RN|26525|interleukin 36 receptor antagonist##AJ242737|IL36RN|26525|interleukin 36 receptor antagonist##AK290249|IL36RN|26525|interleukin 36 receptor antagonist##AY359117|IL36RN|26525|interleukin 36 receptor antagonist##AF043143|IL1RN|3557|interleukin 1 receptor antagonist##NM_000577|IL1RN|3557|interleukin 1 receptor antagonist##NM_173841|IL1RN|3557|interleukin 1 receptor antagonist##NM_173843|IL1RN|3557|interleukin 1 receptor antagonist##M55646|IL1RN|3557|interleukin 1 receptor antagonist##AK290898|IL1RN|3557|interleukin 1 receptor antagonist##X84348|IL1RN|3557|interleukin 1 receptor antagonist##BC009745|IL1RN|3557|interleukin 1 receptor antagonist##NM_173842|IL1RN|3557|interleukin 1 receptor antagonist##AK290926|IL1RN|3557|interleukin 1 receptor antagonist##X52015|IL1RN|3557|interleukin 1 receptor antagonist##X53296|IL1RN|3557|interleukin 1 receptor antagonist	0.0	
chr15	95213814	95213931	reg1018486.p1	7.091	+	NM_001159644 BC025708 BC111024 AK002037	-314563	+	NM_001159643 NM_018349 AY656717 BC131527	-372411	+	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	-439014	+	TSC_hg19_v1_chr15_-_95870310 BC040875	656447	-	BC106083 NM_001145155 FM208183	1655289	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	1660105	+	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##BC040875|LOC400456|400456|uncharacterized LOC400456##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.997532	CTCF.p2:-12:0.998
chr8	22004417	22004552	reg1020425.p2	7.091	+	AY562242 CR457353 AK025930 AF218014 AK302352 TSC_hg19_v1_chr8_-_21999400 BC050622 AK025899 AK172846 BC013048 NM_025232	-5257	-	TSC_hg19_v1_chr8_-_21988524 NM_005144 NM_018411	-15894	-	CU677759 AK026147 TSC_hg19_v1_chr8_-_21966936 BC016902 NM_024815	-37596	-	AF467956 BC142997 TSC_hg19_v1_chr8_-_22014320 BC036494 AJ487961 NM_139278	9819	-	J03553 NM_001172357 NM_001172410 NM_003018 BC105594 AK315742 BC005913 AK298119 J03517 DQ884411	14770	+	TSC_hg19_v1_chr8_+_22022649 NM_001199 NM_006129	18164	+	AY562242|REEP4|80346|receptor accessory protein 4##CR457353|REEP4|80346|receptor accessory protein 4##AK025930|REEP4|80346|receptor accessory protein 4##AF218014|REEP4|80346|receptor accessory protein 4##AK302352|REEP4|80346|receptor accessory protein 4##BC050622|REEP4|80346|receptor accessory protein 4##AK025899|REEP4|80346|receptor accessory protein 4##AK172846|REEP4|80346|receptor accessory protein 4##BC013048|REEP4|80346|receptor accessory protein 4##NM_025232|REEP4|80346|receptor accessory protein 4##NM_005144|HR|55806|hairless homolog (mouse)##NM_018411|HR|55806|hairless homolog (mouse)##AK026147|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##BC016902|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##NM_024815|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##AF467956|LGI3|203190|leucine-rich repeat LGI family, member 3##BC142997|LGI3|203190|leucine-rich repeat LGI family, member 3##BC036494|LGI3|203190|leucine-rich repeat LGI family, member 3##AJ487961|LGI3|203190|leucine-rich repeat LGI family, member 3##NM_139278|LGI3|203190|leucine-rich repeat LGI family, member 3##J03553|SFTPC|6440|surfactant protein C##NM_001172357|SFTPC|6440|surfactant protein C##NM_001172410|SFTPC|6440|surfactant protein C##NM_003018|SFTPC|6440|surfactant protein C##BC105594|SFTPC|6440|surfactant protein C##AK315742|SFTPC|6440|surfactant protein C##BC005913|SFTPC|6440|surfactant protein C##AK298119|SFTPC|6440|surfactant protein C##J03517|SFTPC|6440|surfactant protein C##DQ884411|SFTPC|6440|surfactant protein C##NM_001199|BMP1|649|bone morphogenetic protein 1##NM_006129|BMP1|649|bone morphogenetic protein 1	0.995285	CTCF.p2:0:0.995
chr9	116444621	116444733	reg1019372.p1	7.091	+	TSC_hg19_v1_chr9_+_116356408 BC018072 BC019039 CU676160	-88196	+	AF490838 NM_144489 AK054584	-88467	+	U27655 AK125094 TSC_hg19_v1_chr9_+_116343207	-101489	+	TSC_hg19_v1_chr9_+_116638585 BC036039 NM_133374 BC136287 BC143826 AK126896 BC053892	193922	+	TSC_hg19_v1_chr9_-_116840540 CU692002 AB463406 X04494	395823	-	TSC_hg19_v1_chr9_-_116840546 AY544123	395870	-	BC018072|RGS3|5998|regulator of G-protein signaling 3##BC019039|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3##U27655|RGS3|5998|regulator of G-protein signaling 3##AK125094|RGS3|5998|regulator of G-protein signaling 3##BC036039|ZNF618|114991|zinc finger protein 618##NM_133374|ZNF618|114991|zinc finger protein 618##BC136287|ZNF618|114991|zinc finger protein 618##BC143826|ZNF618|114991|zinc finger protein 618##AK126896|ZNF618|114991|zinc finger protein 618##BC053892|ZNF618|114991|zinc finger protein 618##X04494|AMBP|259|alpha-1-microglobulin/bikunin precursor##AY544123|AMBP|259|alpha-1-microglobulin/bikunin precursor	0.657582	CTCF.p2:-3:0.646
chr10	99223486	99223602	reg1018082.p1	7.090	+	TSC_hg19_v1_chr10_+_99205974 AY359080 AJ294945	-17533	+	TSC_hg19_v1_chr10_+_99205966 AF258563 BC033157 BC004535	-17584	+	TSC_hg19_v1_chr10_+_99205934 BC008074 BC012830 NM_032327 NM_198043 NM_198044 NM_198045 AK297962 AK074427 BC011749 BC050652 NM_198046	-17612	+	AB590771 TSC_hg19_v1_chr10_-_99258147 BC033101 BC080532 AJ306408 AK225312 AK304287 AK314374 BC117129 BC143285 AF357881	34614	-	TSC_hg19_v1_chr10_-_99258190 AK298995	34647	-	NM_022362 AF319947	34894	-	AY359080|ZDHHC16|84287|zinc finger, DHHC-type containing 16##AJ294945|ZDHHC16|84287|zinc finger, DHHC-type containing 16##AF258563|ZDHHC16|84287|zinc finger, DHHC-type containing 16##BC033157|ZDHHC16|84287|zinc finger, DHHC-type containing 16##BC004535|ZDHHC16|84287|zinc finger, DHHC-type containing 16##BC008074|ZDHHC16|84287|zinc finger, DHHC-type containing 16##BC012830|ZDHHC16|84287|zinc finger, DHHC-type containing 16##NM_032327|ZDHHC16|84287|zinc finger, DHHC-type containing 16##NM_198043|ZDHHC16|84287|zinc finger, DHHC-type containing 16##NM_198044|ZDHHC16|84287|zinc finger, DHHC-type containing 16##NM_198045|ZDHHC16|84287|zinc finger, DHHC-type containing 16##AK297962|ZDHHC16|84287|zinc finger, DHHC-type containing 16##AK074427|ZDHHC16|84287|zinc finger, DHHC-type containing 16##BC011749|ZDHHC16|84287|zinc finger, DHHC-type containing 16##BC050652|ZDHHC16|84287|zinc finger, DHHC-type containing 16##NM_198046|ZDHHC16|84287|zinc finger, DHHC-type containing 16##BC033101|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##BC080532|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AJ306408|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AK225312|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AK304287|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AK314374|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##BC117129|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##BC143285|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AF357881|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AK298995|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##NM_022362|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)##AF319947|MMS19|64210|MMS19 nucleotide excision repair homolog (S. cerevisiae)	1.062227	CTCF.p2:26:0.943
chr14	35698865	35698999	reg1016014.p1	7.090	+	TSC_hg19_v1_chr14_+_35591757 AK301931 BC050339 BC044580 BC001542 AK304066 BC032221 NM_014672 AB002389 BX161394 BX161487 AK303508	-107080	+	AK293717 BX248043 TSC_hg19_v1_chr14_-_35591728	-107242	-	AK000651 AK225512 AK225447 TSC_hg19_v1_chr14_-_35591505 BC063438 BC100021 AY157304 AY157305 NM_017917	-107454	-	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	62639	+	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	62711	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	174992	-	AK301931|KIAA0391|9692|KIAA0391##BC044580|KIAA0391|9692|KIAA0391##BC001542|KIAA0391|9692|KIAA0391##AK304066|KIAA0391|9692|KIAA0391##BC032221|KIAA0391|9692|KIAA0391##NM_014672|KIAA0391|9692|KIAA0391##AB002389|KIAA0391|9692|KIAA0391##BX161394|KIAA0391|9692|KIAA0391##BX161487|KIAA0391|9692|KIAA0391##AK303508|KIAA0391|9692|KIAA0391##AK293717|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BX248043|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK000651|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK225512|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK225447|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BC063438|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BC100021|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AY157304|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AY157305|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##NM_017917|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	0.990692	CTCF.p2:-51:0.991
chr2	239693773	239693897	reg1021688.p1	7.090	+	TSC_hg19_v1_chr2_+_239335693 AF156777	-358146	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	-358229	+	TSC_hg19_v1_chr2_+_239229215 AB590948 CU691344 AF230877	-464577	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	62928	+	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	628813	-	TSC_hg19_v1_chr2_-_240322695 BC039904	628863	-	AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AF230877|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4	0.999367	CTCF.p2:-12:0.999
chr8	100850351	100850498	reg1019577.p1	7.090	+	TSC_hg19_v1_chr8_+_100025537 BC094749	-824834	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	-824912	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	-824929	+	TSC_hg19_v1_chr8_-_100905892 X13238	55455	-	TSC_hg19_v1_chr8_-_100905910 AK311791	55497	-	NM_004374	55817	-	BC094749|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##X13238|COX6C|1345|cytochrome c oxidase subunit VIc##AK311791|COX6C|1345|cytochrome c oxidase subunit VIc##NM_004374|COX6C|1345|cytochrome c oxidase subunit VIc	0.604385	CTCF.p2:22:0.604
chrX	78010625	78010768	reg1019289.p2	7.090	+	NM_005296 AK314134	-7488	+	AK096184 NM_152694	-95872	-	BC035750 DQ131801 DQ131800 AK023929 DQ131802 NM_006639 AK313643 DQ131799	-427613	-	NM_014499 NM_198333 AK313218 AK292138 BC051875	190176	+	AF345567 BC104922 BC104924 NM_032553	415772	+	CR456875 CU691874 EU446983 AY359051 AB209310 BC040437 BC010511 TSC_hg19_v1_chrX_-_78622829 AK223327 AK303238 AF038953 BC034485	612087	-	NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##AK096184|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_152694|ZCCHC5|203430|zinc finger, CCHC domain containing 5##BC035750|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131801|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131800|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK023929|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131802|CYSLTR1|10800|cysteinyl leukotriene receptor 1##NM_006639|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK313643|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131799|CYSLTR1|10800|cysteinyl leukotriene receptor 1##NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AF345567|GPR174|84636|G protein-coupled receptor 174##BC104922|GPR174|84636|G protein-coupled receptor 174##BC104924|GPR174|84636|G protein-coupled receptor 174##NM_032553|GPR174|84636|G protein-coupled receptor 174##CR456875|ITM2A|9452|integral membrane protein 2A##EU446983|ITM2A|9452|integral membrane protein 2A##AY359051|ITM2A|9452|integral membrane protein 2A##AB209310|ITM2A|9452|integral membrane protein 2A##BC040437|ITM2A|9452|integral membrane protein 2A##BC010511|ITM2A|9452|integral membrane protein 2A##AK223327|ITM2A|9452|integral membrane protein 2A##AK303238|ITM2A|9452|integral membrane protein 2A##AF038953|ITM2A|9452|integral membrane protein 2A##BC034485|ITM2A|9452|integral membrane protein 2A	0.0	
chr1	100151388	100151527	reg1019029.p2	7.089	+	NM_017734 AF262379 AL390971 AJ312214 BC012570 AK000278 AL390973	-39890	+	TSC_hg19_v1_chr1_+_99730067 AF357013 AK300361	-421372	+	AF541281 NM_001166252 NM_014839 AB007924 AK056665 AY304518 AB384482 BC042963 TSC_hg19_v1_chr1_+_99730047 AK291369 AK297417	-421507	+	AK131302 NM_001013660	79891	-	TSC_hg19_v1_chr1_+_100315653 NM_000642 U84007	164186	+	TSC_hg19_v1_chr1_+_100315681 AB621804	164241	+	NM_017734|PALMD|54873|palmdelphin##AF262379|PALMD|54873|palmdelphin##AL390971|PALMD|54873|palmdelphin##AJ312214|PALMD|54873|palmdelphin##BC012570|PALMD|54873|palmdelphin##AK000278|PALMD|54873|palmdelphin##AL390973|PALMD|54873|palmdelphin##AF357013|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK300361|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK131302|FRRS1|391059|ferric-chelate reductase 1##NM_001013660|FRRS1|391059|ferric-chelate reductase 1##NM_000642|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##U84007|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase	0.989289	CTCF.p2:-8:0.989
chrX	153857361	153857474	reg1019449.p1	7.089	+	AJ275978 AJ003149 BC130362 BC130364 NM_001327 NM_139250 U87459	-9962	-	NM_001327 NM_139250 U87459 BC130362 BC130364 AJ003149 AJ275978	-43935	+	AF261086 NM_003639 AF091453	-81320	+	AJ012833 AM393026 AM393495 AM393696 AM393839 AB463462 BC002833 BC113998 BC114933 BC128045 AJ223041 AY679088 AY679089 AJ012834 AJ012835 AJ223040 NM_020994 NM_172377	24387	-	TSC_hg19_v1_chrX_-_153979326 AB463697 AK126283 AY057989 NM_001081573 NM_080612 AK307927	121880	-	TSC_hg19_v1_chrX_-_153979807 AL832051 DQ656063	122409	-	AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AF261086|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##NM_003639|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AF091453|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AJ012833|CTAG2|30848|cancer/testis antigen 2##AM393026|CTAG2|30848|cancer/testis antigen 2##AM393495|CTAG2|30848|cancer/testis antigen 2##AM393696|CTAG2|30848|cancer/testis antigen 2##AM393839|CTAG2|30848|cancer/testis antigen 2##BC002833|CTAG2|30848|cancer/testis antigen 2##BC113998|CTAG2|30848|cancer/testis antigen 2##BC114933|CTAG2|30848|cancer/testis antigen 2##BC128045|CTAG2|30848|cancer/testis antigen 2##AJ223041|CTAG2|30848|cancer/testis antigen 2##AY679088|CTAG2|30848|cancer/testis antigen 2##AY679089|CTAG2|30848|cancer/testis antigen 2##AJ012834|CTAG2|30848|cancer/testis antigen 2##AJ012835|CTAG2|30848|cancer/testis antigen 2##AJ223040|CTAG2|30848|cancer/testis antigen 2##NM_020994|CTAG2|30848|cancer/testis antigen 2##NM_172377|CTAG2|30848|cancer/testis antigen 2##AK126283|GAB3|139716|GRB2-associated binding protein 3##AY057989|GAB3|139716|GRB2-associated binding protein 3##NM_001081573|GAB3|139716|GRB2-associated binding protein 3##NM_080612|GAB3|139716|GRB2-associated binding protein 3##AK307927|GAB3|139716|GRB2-associated binding protein 3##AL832051|GAB3|139716|GRB2-associated binding protein 3	0.857087	CTCF.p2:0:0.857
chr1	88768959	88769067	reg1019571.p2	7.088	+	TSC_hg19_v1_chr1_+_87797426 BC065818	-971598	+	TSC_hg19_v1_chr1_+_87797312 AY321514	-971688	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	-974332	+	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	381082	+	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	588198	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	588260	-	BC065818|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB	0.053756	
chrX	25987234	25987350	reg1020292.p1	7.088	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-953219	-	BC169334 TSC_hg19_v1_chrX_-_25031209	-956099	-	NM_016937 X06745 TSC_hg19_v1_chrX_+_24712066	-1275227	+	NM_173699 BC029525 AK057361	169194	+	AK097561 BC067286 NM_173523	223264	+	BC157859 NM_001136533	1777633	+	NM_139058|ARX|170302|aristaless related homeobox##BC169334|ARX|170302|aristaless related homeobox##NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2	0.97886	CTCF.p2:19:0.979
chr4	64162647	64162755	reg1021977.p1	7.087	+	NM_015236	-1799863	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-2095726	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-6186133	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	1112395	-	AK307826 NM_004439 NM_182472	2372951	-	TSC_hg19_v1_chr4_-_66536182 AB209375	2373496	-	NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.065307	
chr11	13487556	13487723	reg1020774.p2	7.086	+	AK298226 TSC_hg19_v1_chr11_-_13484770 AK310935 AK292392 AK095946 BC005071 AL832981 NM_032320 AF329102	-2848	-	TSC_hg19_v1_chr11_+_13299403 BC031214 BC034314	-188184	+	TSC_hg19_v1_chr11_+_13299376 AF044288 AK095749	-188257	+	V00597 BC096142 BC096143 BC096144 BC096145 NM_000315	29906	-	TSC_hg19_v1_chr11_+_13690212 NM_032228 AY358784	202551	+	CR936619 TSC_hg19_v1_chr11_+_13690235	202598	+	AK298226|BTBD10|84280|BTB (POZ) domain containing 10##AK310935|BTBD10|84280|BTB (POZ) domain containing 10##AK292392|BTBD10|84280|BTB (POZ) domain containing 10##AK095946|BTBD10|84280|BTB (POZ) domain containing 10##BC005071|BTBD10|84280|BTB (POZ) domain containing 10##AL832981|BTBD10|84280|BTB (POZ) domain containing 10##NM_032320|BTBD10|84280|BTB (POZ) domain containing 10##AF329102|BTBD10|84280|BTB (POZ) domain containing 10##BC031214|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AF044288|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK095749|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##V00597|PTH|5741|parathyroid hormone##BC096142|PTH|5741|parathyroid hormone##BC096143|PTH|5741|parathyroid hormone##BC096144|PTH|5741|parathyroid hormone##BC096145|PTH|5741|parathyroid hormone##NM_000315|PTH|5741|parathyroid hormone##NM_032228|FAR1|84188|fatty acyl CoA reductase 1##AY358784|FAR1|84188|fatty acyl CoA reductase 1##CR936619|FAR1|84188|fatty acyl CoA reductase 1	0.884296	CTCF.p2:16:0.884
chr11	67494950	67495083	reg1020875.p2	7.085	+	TSC_hg19_v1_chr11_-_67450557 AB055770	-44470	-	BC007685 NM_001031615	-46332	-	TSC_hg19_v1_chr11_-_67442086 AK309277 NM_000695 AK092464	-52885	-	TSC_hg19_v1_chr11_-_67572800 BC063712 BC110365	77736	-	TSC_hg19_v1_chr11_-_67771527 BC101568 BC105104 BC025669 AJ422142 AJ271326 BC092472 BC033623 NM_030930	276551	-	TSC_hg19_v1_chr11_+_67776039 EF411198 NM_001161473	281015	+	AB055770|RPL37|6167|ribosomal protein L37##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC063712|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC110365|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC101568|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC105104|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC025669|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ422142|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ271326|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC092472|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC033623|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##NM_030930|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##EF411198|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001161473|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1	0.503929	CTCF.p2:-64:0.332
chr2	74307518	74307639	reg1016658.p2	7.085	+	NM_144993	-34129	+	TSC_hg19_v1_chr2_+_74154019 X97386	-153532	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-153578	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	67440	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	67642	+	AL122062 TSC_hg19_v1_chr2_-_74382411	74803	-	NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.101687	
chr3	130418738	130418878	reg1022728.p1	7.085	+	AM774225 NM_001102608	-139631	+	EU085556 NM_153264 AM906078	-354390	+	TSC_hg19_v1_chr3_-_129830331 BC071676	-588459	-	BC127105 BC127106 TSC_hg19_v1_chr3_-_130465651 AK314219 BC110318 BC009899 BC017332 BC057239 NM_014602	46795	-	NM_001199180 NM_001199181 NM_001199182 AK296470	150598	+	TSC_hg19_v1_chr3_+_130612841 AB037768 NM_001199179 NM_001001485 NM_001199183 NM_001199184 AF189723 AF225981 AK304175 BC028139 NM_001199185 NM_014382 AF181120 AF181121 AK314342 NM_001001486 NM_001001487 AY268374 AY268375	194337	+	AM774225|COL6A6|131873|collagen, type VI, alpha 6##NM_001102608|COL6A6|131873|collagen, type VI, alpha 6##EU085556|COL6A5|256076|collagen, type VI, alpha 5##NM_153264|COL6A5|256076|collagen, type VI, alpha 5##AM906078|COL6A5|256076|collagen, type VI, alpha 5##BC127105|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC127106|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AK314219|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC110318|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC009899|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC017332|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC057239|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_014602|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_001199180|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199181|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199182|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK296470|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AB037768|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199179|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001485|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199183|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199184|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF189723|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF225981|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK304175|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##BC028139|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199185|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_014382|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181120|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181121|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK314342|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001486|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001487|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268374|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268375|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	0.998907	CTCF.p2:4:0.999
chr3	190768865	190768984	reg1020985.p1	7.085	+	NM_001146686	-188460	-	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	-537047	+	CU687168 BC071780 AY358607 NM_207316	-601294	-	AY398681 AY573933 BC128106 BC128107 NM_198184	161397	+	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	278242	+	AK090630 AX746546 NM_198152	279400	-	NM_001146686|GMNC|647309|geminin coiled-coil domain containing##NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207##AY398681|OSTN|344901|osteocrin##AY573933|OSTN|344901|osteocrin##BC128106|OSTN|344901|osteocrin##BC128107|OSTN|344901|osteocrin##NM_198184|OSTN|344901|osteocrin##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing	0.381584	CTCF.p2:16:0.382
chr4	138654432	138654563	reg1019854.p1	7.085	+	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-200855	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-200905	-	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-3531579	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	508867	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	1282496	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	1350906	-	AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.090623	
chr12	52515751	52515839	reg1020289.p1	7.084	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	-51997	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	-52041	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	-70579	+	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	69949	-	BC117348 BC126393 BC038743 NM_001242696	88768	-	NM_005556 TSC_hg19_v1_chr12_+_52626966	111167	+	BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80##BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##NM_005556|KRT7|3855|keratin 7	0.986562	CTCF.p2:16:0.987
chr4	30382174	30382292	reg1020011.p2	7.084	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-3519693	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-3796553	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-3890248	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	339766	+	AB006757 TSC_hg19_v1_chr4_+_30722198	339961	+	TSC_hg19_v1_chr4_+_30722465 AB006756	340226	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.880916	CTCF.p2:-8:0.881
chr12	27276658	27276802	reg1019204.p1	7.083	+	NM_001080406	-41276	-	TSC_hg19_v1_chr12_+_27175501 U46837 U52960 AB463863 EU446930 AK311838 CR456999	-101215	+	AK309064 BC008380 NM_004264 TSC_hg19_v1_chr12_+_27175482	-101248	+	NM_015000 BC028603 TSC_hg19_v1_chr12_+_27397168	120394	+	TSC_hg19_v1_chr12_+_27397187 AK291055	120457	+	TSC_hg19_v1_chr12_+_27397225 AK304755	120495	+	NM_001080406|C12orf71|728858|chromosome 12 open reading frame 71##U46837|MED21|9412|mediator complex subunit 21##U52960|MED21|9412|mediator complex subunit 21##EU446930|MED21|9412|mediator complex subunit 21##AK311838|MED21|9412|mediator complex subunit 21##CR456999|MED21|9412|mediator complex subunit 21##AK309064|MED21|9412|mediator complex subunit 21##BC008380|MED21|9412|mediator complex subunit 21##NM_004264|MED21|9412|mediator complex subunit 21##NM_015000|STK38L|23012|serine/threonine kinase 38 like##BC028603|STK38L|23012|serine/threonine kinase 38 like##AK291055|STK38L|23012|serine/threonine kinase 38 like##AK304755|STK38L|23012|serine/threonine kinase 38 like	0.980409	CTCF.p2:29:0.980
chr13	43877279	43877423	reg1019293.p1	7.083	+	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	-279649	+	AF126743 AY248898 NM_013238	-280002	+	CU692822 DQ892268 DQ895469 TSC_hg19_v1_chr13_-_43566378 AL831953 AF396928 BC023660 AK313877 AK292461 NM_001002264 NM_033255	-310981	-	BC024178 NM_001127615	326259	-	TSC_hg19_v1_chr13_-_44361107 BC068521 NM_001242863 NM_017993	483732	-	NM_001128303	576068	+	BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AF126743|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY248898|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_013238|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##DQ892268|EPSTI1|94240|epithelial stromal interaction 1 (breast)##DQ895469|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AL831953|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AF396928|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC023660|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK313877|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK292461|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_001002264|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_033255|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC024178|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001127615|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC068521|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001242863|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_017993|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1	0.281545	CTCF.p2:-16:0.282
chr7	75988713	75988852	reg1019499.p1	7.083	+	BC020963 TSC_hg19_v1_chr7_-_75988335 NM_012479	-452	-	AK295029 TSC_hg19_v1_chr7_-_75988309 AB024334 AK024230 AK293505	-489	-	AB384983 AF142498 CR541904 CR541925 CU676788 TSC_hg19_v1_chr7_-_75988268	-584	-	TSC_hg19_v1_chr7_+_76026838 AK292763 NM_007155 BC113949	38061	+	BC113840 AK172783 AJ312755 NM_080744	50170	-	X56777 M60504 NM_001110354	65479	+	BC020963|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##NM_012479|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##AK295029|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##AB024334|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##AK024230|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##AK293505|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##AF142498|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##CR541904|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##CR541925|YWHAG|7532|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide##AK292763|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_007155|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##BC113949|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##BC113840|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##AK172783|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##AJ312755|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##NM_080744|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##X56777|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##M60504|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_001110354|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)	0.015366	
chr6	100316088	100316190	reg1016682.p1	7.082	+	AY004253 NM_021620	-261490	+	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	-299536	-	CU679631 CU691126 AB528579 AB125137 BC050726 TSC_hg19_v1_chr6_-_100016505 AK223247 M74091 AK291914 AK222768 BC026272 BC030159 BC056153	-299682	-	AK123634 NM_001040179 NM_032503 AF347063	125971	-	NM_005068 U70212	595411	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	1012961	-	AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##AB125137|CCNC|892|cyclin C##BC050726|CCNC|892|cyclin C##AK223247|CCNC|892|cyclin C##M74091|CCNC|892|cyclin C##AK291914|CCNC|892|cyclin C##AK222768|CCNC|892|cyclin C##BC026272|CCNC|892|cyclin C##BC030159|CCNC|892|cyclin C##BC056153|CCNC|892|cyclin C##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.99743	CTCF.p2:-9:0.997
chr7	38385288	38385394	reg1018210.p1	7.082	+	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	-10137	-	BC062761 BC105589 AF151103 NM_001003799 NM_001003806	-72102	-	TSC_hg19_v1_chr7_+_38217932 AK091579 AX747072 AJ492267 AY358645 BC005959	-167383	+	Y00482 TSC_hg19_v1_chr7_-_38389512	4135	-	TSC_hg19_v1_chr7_-_38389583 BC035592	4248	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	285621	-	BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)##BC062761|TRGV9|6983|T cell receptor gamma variable 9##BC105589|TARP|445347|TCR gamma alternate reading frame protein##AF151103|TARP|445347|TCR gamma alternate reading frame protein##NM_001003799|TARP|445347|TCR gamma alternate reading frame protein##NM_001003806|TARP|445347|TCR gamma alternate reading frame protein##AK091579|STARD3NL|83930|STARD3 N-terminal like##AJ492267|STARD3NL|83930|STARD3 N-terminal like##AY358645|STARD3NL|83930|STARD3 N-terminal like##BC005959|STARD3NL|83930|STARD3 N-terminal like##BC035592|TRGV5|6978|T cell receptor gamma variable 5##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin	0.998956	CTCF.p2:25:0.999
chr9	90293716	90293839	reg1020321.p2	7.082	+	TSC_hg19_v1_chr9_+_90112781 NM_004938 X76104 BC003614 AK295119	-180909	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	-181191	+	AK127445 NM_001001709 BC132741 BC136791 HQ258059	-530176	+	NM_001912 NM_145918 TSC_hg19_v1_chr9_+_90341001	47216	+	AK075100 TSC_hg19_v1_chr9_+_90341022 BX648848	47245	+	AL832167 BX647102 BX647434 TSC_hg19_v1_chr9_+_90341033 BX537395 BX647101 BX647413 BX647435 BX648849 BX649140 X12451 AF304301 BC142983 AF217997	47263	+	NM_004938|DAPK1|1612|death-associated protein kinase 1##X76104|DAPK1|1612|death-associated protein kinase 1##AK295119|DAPK1|1612|death-associated protein kinase 1##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##NM_001912|CTSL1|1514|cathepsin L1##NM_145918|CTSL1|1514|cathepsin L1##AK075100|CTSL1|1514|cathepsin L1##BX648848|CTSL1|1514|cathepsin L1##AL832167|CTSL1|1514|cathepsin L1##BX647102|CTSL1|1514|cathepsin L1##BX647434|CTSL1|1514|cathepsin L1##BX537395|CTSL1|1514|cathepsin L1##BX647101|CTSL1|1514|cathepsin L1##BX647413|CTSL1|1514|cathepsin L1##BX647435|CTSL1|1514|cathepsin L1##BX648849|CTSL1|1514|cathepsin L1##BX649140|CTSL1|1514|cathepsin L1##X12451|CTSL1|1514|cathepsin L1##AF304301|CTSL1|1514|cathepsin L1##BC142983|CTSL1|1514|cathepsin L1##AF217997|CTSL1|1514|cathepsin L1	0.991192	CTCF.p2:-1:0.991
chrX	51079560	51079700	reg1021515.p1	7.081	+	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	-3927	+	AF469196 NM_153183	-4548	+	BC117264 BC117266 NM_005448 BC069155 HQ258214	-425872	+	AB528198 AM392606 AK001490 TSC_hg19_v1_chrX_-_51239368	159702	-	BC009942 TSC_hg19_v1_chrX_-_51239444 NM_018159	159812	-	TSC_hg19_v1_chrX_+_51486493 NM_018094 AK225671 BC036077 AK298868 AK023155 AK001303	406881	+	AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AM392606|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK001490|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##BC009942|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018159|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018094|GSPT2|23708|G1 to S phase transition 2##BC036077|GSPT2|23708|G1 to S phase transition 2##AK298868|GSPT2|23708|G1 to S phase transition 2##AK023155|GSPT2|23708|G1 to S phase transition 2##AK001303|GSPT2|23708|G1 to S phase transition 2	0.99696	CTCF.p2:0:0.997
chr14	23523736	23523845	reg1020525.p2	7.080	+	AK122797 NM_001099780 AB299437 AB590974	-12386	+	NM_001144932 NM_002797 NM_001130725	-19400	-	BT006777 S74378 D29011 BC004146 BX248299 AB528985 CU691272 TSC_hg19_v1_chr14_-_23504095 AK300714 BX538001 BC107720 BC057840 AK311895 AK225888	-19768	-	AK057922 BC110867 TSC_hg19_v1_chr14_-_23526749 AK307746 BX248750 BC142724 AK289576 NM_022478 NM_144985	2986	-	AF124727 BX247975 TSC_hg19_v1_chr14_-_23540768 AF124728	16960	-	TSC_hg19_v1_chr14_-_23540779 NM_001164816 NM_001164817	16993	-	AK122797|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##NM_001099780|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##AB299437|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##NM_001144932|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_002797|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_001130725|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BT006777|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##S74378|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BX248299|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK300714|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BX538001|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BC107720|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BC057840|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK311895|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK225888|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK057922|CDH24|64403|cadherin 24, type 2##BC110867|CDH24|64403|cadherin 24, type 2##AK307746|CDH24|64403|cadherin 24, type 2##BX248750|CDH24|64403|cadherin 24, type 2##BC142724|CDH24|64403|cadherin 24, type 2##AK289576|CDH24|64403|cadherin 24, type 2##NM_022478|CDH24|64403|cadherin 24, type 2##NM_144985|CDH24|64403|cadherin 24, type 2##AF124727|ACIN1|22985|apoptotic chromatin condensation inducer 1##BX247975|ACIN1|22985|apoptotic chromatin condensation inducer 1##AF124728|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164816|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164817|ACIN1|22985|apoptotic chromatin condensation inducer 1	0.17817	
chr16	65017997	65018146	reg1022172.p1	7.080	+	AK124734 NM_001796	-2947333	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-6249874	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-6299415	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	137831	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	137897	-	TSC_hg19_v1_chr16_-_65155987 AK297377	137923	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.71875	CTCF.p2:18:0.719
chr7	78806306	78806438	reg1022963.p1	7.080	+	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-1336863	+	BC067742 TSC_hg19_v1_chr7_+_77428204 AL136883	-1378162	+	TSC_hg19_v1_chr7_+_77428194 NM_001127358 NM_001127360 AK225854 AK090643 AX746556 AK308289	-1378231	+	AB014605 BC150277 AK297353 AF038563 NM_012301	276507	-	TSC_hg19_v1_chr7_+_79083303 AK311103	276785	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	957767	+	BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##BC067742|PHTF2|57157|putative homeodomain transcription factor 2##AL136883|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2##AK225854|PHTF2|57157|putative homeodomain transcription factor 2##AK090643|PHTF2|57157|putative homeodomain transcription factor 2##AK308289|PHTF2|57157|putative homeodomain transcription factor 2##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1	0.082186	
chr8	57360601	57360716	reg1018894.p1	7.080	+	BC107706 TSC_hg19_v1_chr8_-_57359201 AK309758 AK314908 NM_001135690	-1429	-	CR541808 CR541828 DQ890865 DQ890871 DQ894027 BC032505 NM_006211	-2107	-	TSC_hg19_v1_chr8_+_57358383 AK091563 AX747062	-2286	+	AY032885 TSC_hg19_v1_chr8_-_57906227	545598	-	TSC_hg19_v1_chr8_-_57906381 BC017797	545720	-	BC067814 TSC_hg19_v1_chr8_-_57906402	545744	-	BC107706|PENK|5179|proenkephalin##AK314908|PENK|5179|proenkephalin##NM_001135690|PENK|5179|proenkephalin##CR541808|PENK|5179|proenkephalin##CR541828|PENK|5179|proenkephalin##DQ890865|PENK|5179|proenkephalin##DQ890871|PENK|5179|proenkephalin##DQ894027|PENK|5179|proenkephalin##BC032505|PENK|5179|proenkephalin##NM_006211|PENK|5179|proenkephalin##AY032885|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1	0.882094	CTCF.p2:-3:0.882
chr10	29419154	29419268	reg1017929.p1	7.079	+	TSC_hg19_v1_chr10_+_28966451 NM_012342 AK290639 BC019252 AK223065 U23070	-452764	+	TSC_hg19_v1_chr10_+_28878692 BC010356	-540505	+	AB590052 AK297460 TSC_hg19_v1_chr10_+_28822585	-596665	+	NM_032517 BC021730 AY358694	158805	+	TSC_hg19_v1_chr10_+_29698475 BC066966 BC050354	279258	+	BC107795 AK056080 TSC_hg19_v1_chr10_+_29698485	279274	+	NM_012342|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK290639|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC019252|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK223065|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##U23070|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC010356|WAC|51322|WW domain containing adaptor with coiled-coil##AK297460|WAC|51322|WW domain containing adaptor with coiled-coil##NM_032517|LYZL1|84569|lysozyme-like 1##BC021730|LYZL1|84569|lysozyme-like 1##AY358694|LYZL1|84569|lysozyme-like 1##BC066966|LOC387647|387647|patched domain containing 3 pseudogene##BC050354|LOC387647|387647|patched domain containing 3 pseudogene##BC107795|LOC387647|387647|patched domain containing 3 pseudogene##AK056080|LOC387647|387647|patched domain containing 3 pseudogene	0.0	
chr1	43379271	43379390	reg1000723.p2	7.079	+	TSC_hg19_v1_chr1_+_43312304 AK296201	-67025	+	AK095184 TSC_hg19_v1_chr1_+_43312290	-67041	+	TSC_hg19_v1_chr1_+_43312284 AF131739	-67057	+	AB384810 BC118590 BC121804 TSC_hg19_v1_chr1_-_43424504 K03195	45092	-	TSC_hg19_v1_chr1_-_43424540 AK292791 AK293306 AK296736 AK312403 AB208987	45242	-	TSC_hg19_v1_chr1_-_43424834 NM_006516	45510	-	AK296201|ZNF691|51058|zinc finger protein 691##AF131739|ZNF691|51058|zinc finger protein 691##BC118590|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##BC121804|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##K03195|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK292791|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK293306|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK296736|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AK312403|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##AB208987|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1##NM_006516|SLC2A1|6513|solute carrier family 2 (facilitated glucose transporter), member 1	0.0	
chr17	42193115	42193235	reg1019018.p1	7.079	+	NM_138387 TSC_hg19_v1_chr17_+_42148102 BC021574 BC062596 AK091417 AX746969 BC002494	-44976	+	BC066298 NM_152344	-48189	-	TSC_hg19_v1_chr17_-_42144008 AK055218 BC044587 BC105288	-49159	-	TSC_hg19_v1_chr17_-_42201007 AK294760 AB011172	7807	-	TSC_hg19_v1_chr17_-_42201010 NM_001015053 NM_005474	7841	-	TSC_hg19_v1_chr17_+_42219297 NM_001171251 NM_024032 AK291924	26091	+	NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC066298|LSM12|124801|LSM12 homolog (S. cerevisiae)##NM_152344|LSM12|124801|LSM12 homolog (S. cerevisiae)##AK055218|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC044587|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC105288|LSM12|124801|LSM12 homolog (S. cerevisiae)##AK294760|HDAC5|10014|histone deacetylase 5##AB011172|HDAC5|10014|histone deacetylase 5##NM_001015053|HDAC5|10014|histone deacetylase 5##NM_005474|HDAC5|10014|histone deacetylase 5##NM_001171251|C17orf53|78995|chromosome 17 open reading frame 53##NM_024032|C17orf53|78995|chromosome 17 open reading frame 53##AK291924|C17orf53|78995|chromosome 17 open reading frame 53	0.697717	CTCF.p2:-14:0.698
chr17_ctg5_hap1	493495	493611	reg1019894.p1	7.079	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.712584	CTCF.p2:4:0.713
chr22	44341877	44342029	reg1020921.p1	7.079	+	TSC_hg19_v1_chr22_+_44319688 BC065195 AB463160 CU013026 CU013314 CR456476 CU688018	-22216	+	TSC_hg19_v1_chr22_+_44319684 AK123806 AK315166	-22274	+	AK025665 AL138578 NM_025225 TSC_hg19_v1_chr22_+_44319651 AK308995	-22309	+	NM_015380 TSC_hg19_v1_chr22_+_44351285 BC011681	9327	+	TSC_hg19_v1_chr22_+_44351321 AK001087	9369	+	TSC_hg19_v1_chr22_+_44351384 AY189688 AF151809 BC007830 AK222657 BC015200 AK297770 AK312773 CR456483 CU013033 CU013321 AB463278 DQ893124 DQ896401 CU677235	9441	+	BC065195|PNPLA3|80339|patatin-like phospholipase domain containing 3##CR456476|PNPLA3|80339|patatin-like phospholipase domain containing 3##AK123806|PNPLA3|80339|patatin-like phospholipase domain containing 3##AK315166|PNPLA3|80339|patatin-like phospholipase domain containing 3##AK025665|PNPLA3|80339|patatin-like phospholipase domain containing 3##AL138578|PNPLA3|80339|patatin-like phospholipase domain containing 3##NM_025225|PNPLA3|80339|patatin-like phospholipase domain containing 3##NM_015380|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC011681|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK001087|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AY189688|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AF151809|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC007830|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK222657|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC015200|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK297770|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK312773|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CR456483|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013033|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013321|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ893124|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ896401|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)	0.999777	CTCF.p2:-10:1.000
chr8	13585319	13585416	reg1017956.p1	7.079	+	AK058131 NM_001007090 BC031245 AF394908 CU689130	-160942	+	BC054511 AK291682 AK024773 AK225098 AB051510 BC049842 NM_024767 NM_182643	-213062	-	TSC_hg19_v1_chr8_-_13134056 AK025544	-451322	-	NM_139167	1510424	-	NM_006765 NM_178234 BC010370 TSC_hg19_v1_chr8_+_15397731	1812296	+	TSC_hg19_v1_chr8_+_15397771 U42349 BT020002 DQ892936 DQ896185	1812483	+	AK058131|C8orf48|157773|chromosome 8 open reading frame 48##NM_001007090|C8orf48|157773|chromosome 8 open reading frame 48##BC031245|C8orf48|157773|chromosome 8 open reading frame 48##AF394908|C8orf48|157773|chromosome 8 open reading frame 48##BC054511|DLC1|10395|deleted in liver cancer 1##AK291682|DLC1|10395|deleted in liver cancer 1##AK024773|DLC1|10395|deleted in liver cancer 1##AK225098|DLC1|10395|deleted in liver cancer 1##AB051510|DLC1|10395|deleted in liver cancer 1##BC049842|DLC1|10395|deleted in liver cancer 1##NM_024767|DLC1|10395|deleted in liver cancer 1##NM_182643|DLC1|10395|deleted in liver cancer 1##AK025544|DLC1|10395|deleted in liver cancer 1##NM_139167|SGCZ|137868|sarcoglycan, zeta##NM_006765|TUSC3|7991|tumor suppressor candidate 3##NM_178234|TUSC3|7991|tumor suppressor candidate 3##BC010370|TUSC3|7991|tumor suppressor candidate 3##U42349|TUSC3|7991|tumor suppressor candidate 3##BT020002|TUSC3|7991|tumor suppressor candidate 3##DQ892936|TUSC3|7991|tumor suppressor candidate 3##DQ896185|TUSC3|7991|tumor suppressor candidate 3	0.999833	CTCF.p2:15:1.000
chr10	87552092	87552176	reg1017605.p1	7.078	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-1367439	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-1420516	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-1463740	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	574129	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	729360	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	729396	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.354215	CTCF.p2:10:0.354
chrX	7110017	7110136	reg1017004.p2	7.078	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	-43884	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	-44125	+	AF167078 AF167079 NM_016379	-656918	-	NM_000351 M16505 J04964 AK314034	27425	+	AF167081 NM_013452	700226	+	AK289888 U03886 NM_004650 BC020746	785374	-	M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S##AF167081|VCX|26609|variable charge, X-linked##NM_013452|VCX|26609|variable charge, X-linked##AK289888|PNPLA4|8228|patatin-like phospholipase domain containing 4##U03886|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_004650|PNPLA4|8228|patatin-like phospholipase domain containing 4##BC020746|PNPLA4|8228|patatin-like phospholipase domain containing 4	0.974481	CTCF.p2:5:0.974
chr11	18432016	18432171	reg1021886.p1	7.077	+	NM_001165414 TSC_hg19_v1_chr11_+_18417926 AK298834	-14207	+	AK130105 TSC_hg19_v1_chr11_+_18416111	-15982	+	AK130035 TSC_hg19_v1_chr11_+_18416109 AK130587 AK296667 AK026515 AK223078 AK296089 AK307477 BC067223 X02152	-15985	+	TSC_hg19_v1_chr11_+_18433884 NM_002301 NM_017448 AY286300 U13680 BC064388 J02938 BC019249 BC090043 AF401094 AF401095 AF401096 AF401097 AK058181	1794	+	AY581313 BC014340 NM_001144071 NM_144972 AK131523	45308	+	AB464330 DQ892792 DQ896039 CU677988 AY207473 AY207474 TSC_hg19_v1_chr11_-_18548471 BC002487 U82130 AK130787 NM_006292	116339	-	NM_001165414|LDHA|3939|lactate dehydrogenase A##AK298834|LDHA|3939|lactate dehydrogenase A##AK130105|LDHA|3939|lactate dehydrogenase A##AK130035|LDHA|3939|lactate dehydrogenase A##AK130587|LDHA|3939|lactate dehydrogenase A##AK296667|LDHA|3939|lactate dehydrogenase A##AK026515|LDHA|3939|lactate dehydrogenase A##AK223078|LDHA|3939|lactate dehydrogenase A##AK296089|LDHA|3939|lactate dehydrogenase A##AK307477|LDHA|3939|lactate dehydrogenase A##BC067223|LDHA|3939|lactate dehydrogenase A##X02152|LDHA|3939|lactate dehydrogenase A##NM_002301|LDHC|3948|lactate dehydrogenase C##NM_017448|LDHC|3948|lactate dehydrogenase C##AY286300|LDHC|3948|lactate dehydrogenase C##U13680|LDHC|3948|lactate dehydrogenase C##BC064388|LDHC|3948|lactate dehydrogenase C##J02938|LDHC|3948|lactate dehydrogenase C##BC019249|LDHC|3948|lactate dehydrogenase C##BC090043|LDHC|3948|lactate dehydrogenase C##AF401094|LDHC|3948|lactate dehydrogenase C##AF401095|LDHC|3948|lactate dehydrogenase C##AF401096|LDHC|3948|lactate dehydrogenase C##AF401097|LDHC|3948|lactate dehydrogenase C##AK058181|LDHC|3948|lactate dehydrogenase C##AY581313|LDHAL6A|160287|lactate dehydrogenase A-like 6A##BC014340|LDHAL6A|160287|lactate dehydrogenase A-like 6A##NM_001144071|LDHAL6A|160287|lactate dehydrogenase A-like 6A##NM_144972|LDHAL6A|160287|lactate dehydrogenase A-like 6A##AK131523|LDHAL6A|160287|lactate dehydrogenase A-like 6A##DQ892792|TSG101|7251|tumor susceptibility gene 101##DQ896039|TSG101|7251|tumor susceptibility gene 101##AY207473|TSG101|7251|tumor susceptibility gene 101##AY207474|TSG101|7251|tumor susceptibility gene 101##BC002487|TSG101|7251|tumor susceptibility gene 101##U82130|TSG101|7251|tumor susceptibility gene 101##AK130787|TSG101|7251|tumor susceptibility gene 101##NM_006292|TSG101|7251|tumor susceptibility gene 101	0.032733	
chr12	89918589	89918689	reg1018260.p2	7.077	+	TSC_hg19_v1_chr12_-_89918537 AK312870 BC036390 NM_003774	-83	-	TSC_hg19_v1_chr12_-_89746275 BC037236 AK091753 AB189400 NM_001946 NM_022652	-172330	-	TSC_hg19_v1_chr12_-_89746238 BC005047	-172399	-	TSC_hg19_v1_chr12_-_89919208 AK123106 NM_001199777	623	-	CU693124 TSC_hg19_v1_chr12_-_89919778 BX647258 AK074772 AK295596 BC026080 EF011619	1121	-	AK297677 NM_001199781 NM_001199782 NM_172240	1399	-	AK312870|GALNT4|8693|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)##BC036390|GALNT4|8693|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)##NM_003774|GALNT4|8693|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 4 (GalNAc-T4)##BC037236|DUSP6|1848|dual specificity phosphatase 6##AK091753|DUSP6|1848|dual specificity phosphatase 6##AB189400|DUSP6|1848|dual specificity phosphatase 6##NM_001946|DUSP6|1848|dual specificity phosphatase 6##NM_022652|DUSP6|1848|dual specificity phosphatase 6##BC005047|DUSP6|1848|dual specificity phosphatase 6##AK123106|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##NM_001199777|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BX647258|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##AK074772|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK295596|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BC026080|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##EF011619|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK297677|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199781|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199782|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_172240|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)	0.025269	
chr18	34242078	34242193	reg1018322.p1	7.077	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	-364421	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-474659	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-532247	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	166628	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	166759	-	AB073382 TSC_hg19_v1_chr18_-_34408948	166817	-	AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.525018	CTCF.p2:23:0.525
chr19	42585880	42585988	reg1019995.p1	7.077	+	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	-5568	+	TSC_hg19_v1_chr19_+_42580286 NM_022752	-5652	+	S40369 AJ249209 BC131717 NM_002088	-15996	-	M36718 X13809 BT007438 AB590941 TSC_hg19_v1_chr19_-_42636564 BC006101 M36653 NM_001207025 NM_001207026 NM_001247994 NM_002698 X53468	50657	-	TSC_hg19_v1_chr19_-_42721830 BC027930 NM_133328 AY125488 BC013372 AK307895 AK130203 AK075328	135905	-	TSC_hg19_v1_chr19_+_42724463 AK298895 AB075831 NM_133444	138530	+	AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574##NM_022752|ZNF574|64763|zinc finger protein 574##S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##M36718|POU2F2|5452|POU class 2 homeobox 2##X13809|POU2F2|5452|POU class 2 homeobox 2##BT007438|POU2F2|5452|POU class 2 homeobox 2##BC006101|POU2F2|5452|POU class 2 homeobox 2##M36653|POU2F2|5452|POU class 2 homeobox 2##NM_001207025|POU2F2|5452|POU class 2 homeobox 2##NM_001207026|POU2F2|5452|POU class 2 homeobox 2##NM_001247994|POU2F2|5452|POU class 2 homeobox 2##NM_002698|POU2F2|5452|POU class 2 homeobox 2##X53468|POU2F2|5452|POU class 2 homeobox 2##BC027930|DEDD2|162989|death effector domain containing 2##NM_133328|DEDD2|162989|death effector domain containing 2##AY125488|DEDD2|162989|death effector domain containing 2##BC013372|DEDD2|162989|death effector domain containing 2##AK307895|DEDD2|162989|death effector domain containing 2##AK130203|DEDD2|162989|death effector domain containing 2##AK075328|DEDD2|162989|death effector domain containing 2##AK298895|ZNF526|116115|zinc finger protein 526##AB075831|ZNF526|116115|zinc finger protein 526##NM_133444|ZNF526|116115|zinc finger protein 526	0.024768	
chr2	113483672	113483853	reg1000045.p1	7.077	+	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	-80242	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-141573	+	TSC_hg19_v1_chr2_+_113342023 AK024631 BC004498 NM_032309 AK312219	-141724	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	38460	-	NM_000575 BC035169	59210	-	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	110582	-	NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BC004498|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_032309|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK312219|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta	0.972886	CTCF.p2:38:0.962
chr11	124994205	124994330	reg1021363.p1	7.076	+	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	-12798	-	NM_001080546	-21063	-	TSC_hg19_v1_chr11_+_124933200 AK290314 AK074100 BC051314 CU690800	-61037	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	40311	+	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	40359	+	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	371874	-	BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##NM_001080546|TMEM218|219854|transmembrane protein 218##AK290314|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##AK074100|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##BC051314|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)	0.999351	CTCF.p2:-5:0.999
chr5	138728374	138728496	reg1019313.p2	7.076	+	GQ477350 DQ892627 EU176703 AK057549 AK292706 BC009931 BC021275 AF151024 NM_016459	-2861	-	TSC_hg19_v1_chr5_-_138719021 NM_005847 NM_152685	-9407	-	AF058317 AJ269477 CU676390 AK290789 AF170911 BC050261 TSC_hg19_v1_chr5_-_138718995 AK300935 AF098277 AK298337 AJ250807 BC019225	-9464	-	NM_001161546	2449	-	BC040037 BC050563 NM_194296 AK098740	11330	-	BC030162 TSC_hg19_v1_chr5_-_138775145 AK024054	46716	-	GQ477350|MZB1|51237|marginal zone B and B1 cell-specific protein##DQ892627|MZB1|51237|marginal zone B and B1 cell-specific protein##EU176703|MZB1|51237|marginal zone B and B1 cell-specific protein##AK057549|MZB1|51237|marginal zone B and B1 cell-specific protein##AK292706|MZB1|51237|marginal zone B and B1 cell-specific protein##BC009931|MZB1|51237|marginal zone B and B1 cell-specific protein##BC021275|MZB1|51237|marginal zone B and B1 cell-specific protein##AF151024|MZB1|51237|marginal zone B and B1 cell-specific protein##NM_016459|MZB1|51237|marginal zone B and B1 cell-specific protein##NM_005847|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##NM_152685|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AF058317|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AJ269477|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AK290789|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AF170911|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##BC050261|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AK300935|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AF098277|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AK298337|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AJ250807|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##BC019225|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##NM_001161546|C5orf65|389333|chromosome 5 open reading frame 65##BC040037|SPATA24|202051|spermatogenesis associated 24##BC050563|SPATA24|202051|spermatogenesis associated 24##NM_194296|SPATA24|202051|spermatogenesis associated 24##AK098740|SPATA24|202051|spermatogenesis associated 24##BC030162|DNAJC18|202052|DnaJ (Hsp40) homolog, subfamily C, member 18	0.041572	
chr5	139145168	139145303	reg1005450.p1	7.076	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	-84843	+	AF151029 TSC_hg19_v1_chr5_+_139060229	-85023	+	BC002490 TSC_hg19_v1_chr5_+_139060088 AB463548 GQ379202 AK314420	-85151	+	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	30171	+	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	277493	-	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	277610	-	DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##BC002490|CXXC5|51523|CXXC finger protein 5##GQ379202|CXXC5|51523|CXXC finger protein 5##AK314420|CXXC5|51523|CXXC finger protein 5##AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2	0.361714	CTCF.p2:-16:0.362
chr8	35744758	35744863	reg1020073.p1	7.076	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-651823	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-2287315	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	-2287351	-	NM_001031836 AK302391 BC028701	897060	+	TSC_hg19_v1_chr8_-_37457377 AK025743	1712558	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	1808507	+	AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703	0.034223	
chr1	115499343	115499456	reg1019070.p1	7.075	+	NM_003176 BC026162 AK315268 AF273043 BC105299 BC126266 BC144019 BC144020 BC065190 X95654	-101887	+	TSC_hg19_v1_chr1_-_115323268 BC005934 AK024821 AK225734 CR749219 CR936771 AK126316 NM_001102396 NM_025073	-176104	-	AB590611 EU832701 TSC_hg19_v1_chr1_-_115323253	-176158	-	NM_000549	73015	+	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	132717	-	BC032517 NM_002506 X52599	381454	-	NM_003176|SYCP1|6847|synaptonemal complex protein 1##BC026162|SYCP1|6847|synaptonemal complex protein 1##AK315268|SYCP1|6847|synaptonemal complex protein 1##AF273043|SYCP1|6847|synaptonemal complex protein 1##BC105299|SYCP1|6847|synaptonemal complex protein 1##BC126266|SYCP1|6847|synaptonemal complex protein 1##BC144019|SYCP1|6847|synaptonemal complex protein 1##BC144020|SYCP1|6847|synaptonemal complex protein 1##BC065190|SYCP1|6847|synaptonemal complex protein 1##X95654|SYCP1|6847|synaptonemal complex protein 1##BC005934|SIKE1|80143|suppressor of IKBKE 1##AK024821|SIKE1|80143|suppressor of IKBKE 1##AK225734|SIKE1|80143|suppressor of IKBKE 1##CR749219|SIKE1|80143|suppressor of IKBKE 1##CR936771|SIKE1|80143|suppressor of IKBKE 1##AK126316|SIKE1|80143|suppressor of IKBKE 1##NM_001102396|SIKE1|80143|suppressor of IKBKE 1##NM_025073|SIKE1|80143|suppressor of IKBKE 1##EU832701|SIKE1|80143|suppressor of IKBKE 1##NM_000549|TSHB|7252|thyroid stimulating hormone, beta##AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)	0.0	
chr19	10185034	10185174	reg1019907.p1	7.075	+	DQ426888 AF229845 NM_015725	-61212	+	TSC_hg19_v1_chr19_-_10121181 AF177941 NM_015719	-63961	-	TSC_hg19_v1_chr19_-_10047187 CU679906 DQ891083 DQ894265 AF131839 BC011361 NM_058164	-137980	-	TSC_hg19_v1_chr19_+_10196791 NM_018381	11682	+	BC026180 TSC_hg19_v1_chr19_+_10197007 AK002148 BC010847 BC035817	11893	+	TSC_hg19_v1_chr19_+_10197045 AL137694 CU690214	11958	+	AF229845|RDH8|50700|retinol dehydrogenase 8 (all-trans)##NM_015725|RDH8|50700|retinol dehydrogenase 8 (all-trans)##AF177941|COL5A3|50509|collagen, type V, alpha 3##NM_015719|COL5A3|50509|collagen, type V, alpha 3##DQ891083|OLFM2|93145|olfactomedin 2##DQ894265|OLFM2|93145|olfactomedin 2##AF131839|OLFM2|93145|olfactomedin 2##BC011361|OLFM2|93145|olfactomedin 2##NM_058164|OLFM2|93145|olfactomedin 2##NM_018381|C19orf66|55337|chromosome 19 open reading frame 66##BC026180|C19orf66|55337|chromosome 19 open reading frame 66##AK002148|C19orf66|55337|chromosome 19 open reading frame 66##BC010847|C19orf66|55337|chromosome 19 open reading frame 66##BC035817|C19orf66|55337|chromosome 19 open reading frame 66##AL137694|C19orf66|55337|chromosome 19 open reading frame 66	0.902748	CTCF.p2:5:0.903
chr9	35646870	35647030	reg1019781.p1	7.075	+	TSC_hg19_v1_chr9_-_35646809 DQ174771 AK311283	-123	-	CU688854 BC011734 BC030227 AK309268 AK307305 AK310093 AK310685 M54992 AF283777 NM_001782	-28589	-	DQ893327 DQ896643 BC037561 AK298907 TSC_hg19_v1_chr9_+_35605808	-41239	+	AB527705 TSC_hg19_v1_chr9_-_35650929 AK314758 AJ010059 BC102029 BC104491 BC107484 NM_014450	3949	-	TSC_hg19_v1_chr9_+_35658298 NM_001195200 NM_001195201 NM_001195217 NM_174923 AK075523	11336	+	TSC_hg19_v1_chr9_+_35658352 BC051285 BC018758 AK307223 CU676316 DQ884403 DQ891940 DQ895126	11391	+	DQ174771|CD72|971|CD72 molecule##AK311283|CD72|971|CD72 molecule##BC011734|CD72|971|CD72 molecule##BC030227|CD72|971|CD72 molecule##AK309268|CD72|971|CD72 molecule##AK307305|CD72|971|CD72 molecule##AK310093|CD72|971|CD72 molecule##AK310685|CD72|971|CD72 molecule##M54992|CD72|971|CD72 molecule##AF283777|CD72|971|CD72 molecule##NM_001782|CD72|971|CD72 molecule##DQ893327|TESK1|7016|testis-specific kinase 1##DQ896643|TESK1|7016|testis-specific kinase 1##BC037561|TESK1|7016|testis-specific kinase 1##AK298907|TESK1|7016|testis-specific kinase 1##AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##NM_001195200|CCDC107|203260|coiled-coil domain containing 107##NM_001195201|CCDC107|203260|coiled-coil domain containing 107##NM_001195217|CCDC107|203260|coiled-coil domain containing 107##NM_174923|CCDC107|203260|coiled-coil domain containing 107##AK075523|CCDC107|203260|coiled-coil domain containing 107##BC051285|CCDC107|203260|coiled-coil domain containing 107##BC018758|CCDC107|203260|coiled-coil domain containing 107##AK307223|CCDC107|203260|coiled-coil domain containing 107##DQ884403|CCDC107|203260|coiled-coil domain containing 107##DQ891940|CCDC107|203260|coiled-coil domain containing 107##DQ895126|CCDC107|203260|coiled-coil domain containing 107	0.0	
chr11	32176008	32176116	reg1019562.p1	7.074	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	-63363	+	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	-63585	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-336584	-	AK093168 BC032861 NM_001198551 NM_001198552	276298	-	TSC_hg19_v1_chr11_-_32456950 BC046461	280877	-	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	281007	-	BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1##BC046461|WT1|7490|Wilms tumor 1##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1	0.089486	
chr8	131428919	131429026	reg1018329.p2	7.074	+	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-400089	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-400278	-	BC016345 TSC_hg19_v1_chr8_-_131028667	-400313	-	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	27059	-	NM_001115	623862	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1487385	+	AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B##NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.780551	CTCF.p2:15:0.781
chr12	54973611	54973737	reg1019677.p1	7.073	+	TSC_hg19_v1_chr12_+_54955248 BX538092 NM_001165975 AK302931 AK126899 AJ401609	-18377	+	TSC_hg19_v1_chr12_+_54943386 BC032226 AB209200 AK302899 U86078	-30264	+	NM_000924	-30498	+	CR457003 AY063766 U48707 TSC_hg19_v1_chr12_-_54982398 BC022470 NM_006741 AK123969	8690	-	CU686745 CU687522 AF238867 BC069317 NM_033277 BC062217	54977	-	AY590150 AF144011 BC062682 BC069108 NM_053283 EF503687 EF503688 EF503689	68531	-	BX538092|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##NM_001165975|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AK302931|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AK126899|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AJ401609|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##BC032226|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AB209200|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AK302899|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##U86078|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##NM_000924|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##CR457003|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AY063766|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##U48707|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##BC022470|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_006741|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AK123969|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AF238867|LACRT|90070|lacritin##BC069317|LACRT|90070|lacritin##NM_033277|LACRT|90070|lacritin##BC062217|LACRT|90070|lacritin##AY590150|DCD|117159|dermcidin##AF144011|DCD|117159|dermcidin##BC062682|DCD|117159|dermcidin##BC069108|DCD|117159|dermcidin##NM_053283|DCD|117159|dermcidin##EF503687|DCD|117159|dermcidin##EF503688|DCD|117159|dermcidin##EF503689|DCD|117159|dermcidin	0.991318	CTCF.p2:2:0.991
chr20	24081424	24081548	reg1020720.p1	7.073	+	BC040904 NM_178311	-112071	-	L20492 L20491 NM_178312	-114015	-	AB590893 CU686872 HQ447459 BC069514 X70377 BC062678 NM_001900	-221140	-	AK024282 NM_024893	368348	+	TSC_hg19_v1_chr20_+_24450295 BC030637	368816	+	TSC_hg19_v1_chr20_+_24929865 NM_003650	848377	+	BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20492|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20491|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178312|GGTLC1|92086|gamma-glutamyltransferase light chain 1##HQ447459|CST5|1473|cystatin D##BC069514|CST5|1473|cystatin D##X70377|CST5|1473|cystatin D##BC062678|CST5|1473|cystatin D##NM_001900|CST5|1473|cystatin D##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1##BC030637|SYNDIG1|79953|synapse differentiation inducing 1##NM_003650|CST7|8530|cystatin F (leukocystatin)	0.606881	CTCF.p2:3:0.607
chr2	162980423	162980557	reg1015984.p1	7.073	+	BC065265 NM_001935 TSC_hg19_v1_chr2_-_162931062	-49434	-	TSC_hg19_v1_chr2_-_162930636 AK314798	-49858	-	TSC_hg19_v1_chr2_-_162930585 X60708	-49913	-	NM_002054	28423	-	BC026250 AF007822 U76833 AK315448 AK309260 AK297118 NM_004460 U09278	119470	-	CU692330 BC111750 AY017378 AF095844 NM_022168 BC078180 TSC_hg19_v1_chr2_-_163175195 BC046208 AK292941 AK314611	194593	-	BC065265|DPP4|1803|dipeptidyl-peptidase 4##NM_001935|DPP4|1803|dipeptidyl-peptidase 4##AK314798|DPP4|1803|dipeptidyl-peptidase 4##X60708|DPP4|1803|dipeptidyl-peptidase 4##NM_002054|GCG|2641|glucagon##BC026250|FAP|2191|fibroblast activation protein, alpha##AF007822|FAP|2191|fibroblast activation protein, alpha##U76833|FAP|2191|fibroblast activation protein, alpha##AK315448|FAP|2191|fibroblast activation protein, alpha##AK309260|FAP|2191|fibroblast activation protein, alpha##AK297118|FAP|2191|fibroblast activation protein, alpha##NM_004460|FAP|2191|fibroblast activation protein, alpha##U09278|FAP|2191|fibroblast activation protein, alpha##BC111750|IFIH1|64135|interferon induced with helicase C domain 1##AY017378|IFIH1|64135|interferon induced with helicase C domain 1##AF095844|IFIH1|64135|interferon induced with helicase C domain 1##NM_022168|IFIH1|64135|interferon induced with helicase C domain 1##BC078180|IFIH1|64135|interferon induced with helicase C domain 1##BC046208|IFIH1|64135|interferon induced with helicase C domain 1##AK292941|IFIH1|64135|interferon induced with helicase C domain 1##AK314611|IFIH1|64135|interferon induced with helicase C domain 1	0.999637	CTCF.p2:24:1.000
chr19	17316185	17316307	reg1022516.p1	7.072	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-129653	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-129925	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-178706	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	9926	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	9959	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	20788	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	1.077348	CTCF.p2:8:0.986
chr2	161826873	161826988	reg1023189.p1	7.072	+	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	-476613	-	CU676342 D28482 X77494 AK225887 L11289 TSC_hg19_v1_chr2_-_161350025 AK309949 BC012992 BC012993 AK297812	-476971	-	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	-696741	-	NM_004180 NM_133484 U59863 U63830	166535	+	TSC_hg19_v1_chr2_+_162016938 AK313096 NM_001199135 BC067779	190019	+	NM_005805 TSC_hg19_v1_chr2_+_162164936 BC066336	337932	+	BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_004180|TANK|10010|TRAF family member-associated NFKB activator##NM_133484|TANK|10010|TRAF family member-associated NFKB activator##U59863|TANK|10010|TRAF family member-associated NFKB activator##U63830|TANK|10010|TRAF family member-associated NFKB activator##AK313096|TANK|10010|TRAF family member-associated NFKB activator##NM_001199135|TANK|10010|TRAF family member-associated NFKB activator##BC067779|TANK|10010|TRAF family member-associated NFKB activator##NM_005805|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##BC066336|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14	0.852392	CTCF.p2:9:0.852
chr3	11845619	11845722	reg1018755.p1	7.072	+	TSC_hg19_v1_chr3_-_11762012 D50911 BC001514 AK130542 BC000763 BC003038 NM_014667	-83555	-	TSC_hg19_v1_chr3_-_11685397 NM_001128219	-160274	-	AK307708 TSC_hg19_v1_chr3_-_11623831 NM_001128220	-221837	-	EU832515 EU832596 AK295839 TSC_hg19_v1_chr3_-_11888358 AK310993 BC015088 NM_138807 AK092776 AX747723 AK309733 AK303598	42589	-	TSC_hg19_v1_chr3_+_12045861 NM_003178 NM_133625 AK094464 BC051307 AB209088 U40215 AF077671 AF077737	200233	+	BT019627 CU679743 DQ891795 DQ894978 U76456 TSC_hg19_v1_chr3_-_12200413 AK313018	354709	-	D50911|VGLL4|9686|vestigial like 4 (Drosophila)##BC001514|VGLL4|9686|vestigial like 4 (Drosophila)##AK130542|VGLL4|9686|vestigial like 4 (Drosophila)##BC000763|VGLL4|9686|vestigial like 4 (Drosophila)##BC003038|VGLL4|9686|vestigial like 4 (Drosophila)##NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)##AK307708|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)##EU832515|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##EU832596|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK295839|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK310993|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##BC015088|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_138807|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK092776|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK309733|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK303598|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_003178|SYN2|6854|synapsin II##NM_133625|SYN2|6854|synapsin II##AK094464|SYN2|6854|synapsin II##BC051307|SYN2|6854|synapsin II##AB209088|SYN2|6854|synapsin II##U40215|SYN2|6854|synapsin II##AF077671|SYN2|6854|synapsin II##AF077737|SYN2|6854|synapsin II##BT019627|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ891795|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ894978|TIMP4|7079|TIMP metallopeptidase inhibitor 4##U76456|TIMP4|7079|TIMP metallopeptidase inhibitor 4##AK313018|TIMP4|7079|TIMP metallopeptidase inhibitor 4	0.993965	CTCF.p2:-9:0.994
chr18	56283141	56283293	reg1019334.p2	7.071	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-394367	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-394414	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-394455	+	BX647796 NM_052947	12971	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	55424	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	55511	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.0	
chr19	2561914	2562045	reg1013480.p1	7.071	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-85741	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-105019	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-105043	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	140716	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	140763	-	AK124445 TSC_hg19_v1_chr19_-_2717420	155370	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.320372	CTCF.p2:-25:0.320
chr2	24149948	24150072	reg1020589.p1	7.071	+	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	-64	-	NM_052920	-541713	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2883081	-	TSC_hg19_v1_chr2_+_24150144 BC037901	147	+	TSC_hg19_v1_chr2_+_24163332 BC092484 AL832079 NM_181713 BC111997 BC093681 BC143298	13361	+	NM_001080473	82942	+	BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC037901|UBXN2A|165324|UBX domain protein 2A##BC092484|UBXN2A|165324|UBX domain protein 2A##AL832079|UBXN2A|165324|UBX domain protein 2A##NM_181713|UBXN2A|165324|UBX domain protein 2A##BC111997|UBXN2A|165324|UBX domain protein 2A##BC093681|UBXN2A|165324|UBX domain protein 2A##BC143298|UBXN2A|165324|UBX domain protein 2A##NM_001080473|MFSD2B|388931|major facilitator superfamily domain containing 2B	0.0	
chr13	115046076	115046257	reg1020533.p1	7.070	+	TSC_hg19_v1_chr13_+_115000402 AK296424 BC017244 BC010875 AK315302 U18291 AB590520 AF164598 CU677877	-45704	+	TSC_hg19_v1_chr13_+_115000360 NM_001078645 NM_003903	-45807	+	TSC_hg19_v1_chr13_-_114898084 BC047242 BC038456 NM_007368	-148063	-	TSC_hg19_v1_chr13_+_115047085 AY013250 NM_023011 NM_080687 BC023569 BC047735 AK294545 AK302003 AF318575	948	+	TSC_hg19_v1_chr13_+_115080005 NM_001164144 NM_001164145 NM_032436 AK096346 BC065237	33820	+	None	None	None	AK296424|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC017244|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC010875|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AK315302|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##U18291|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AF164598|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##NM_001078645|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##NM_003903|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC047242|RASA3|22821|RAS p21 protein activator 3##BC038456|RASA3|22821|RAS p21 protein activator 3##NM_007368|RASA3|22821|RAS p21 protein activator 3##AY013250|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_023011|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_080687|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC023569|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC047735|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK294545|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK302003|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AF318575|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_001164144|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##NM_001164145|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##NM_032436|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##AK096346|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##BC065237|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1	0.0	
chr2	90108266	90108368	reg1019679.p1	7.070	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-30563	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-488464	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-595084	-	TSC_hg19_v1_chr2_+_90211706 Z69013	103401	+	TSC_hg19_v1_chr2_-_91847997 BC030764	1739686	-	AK097438 BC021716 NM_144705 AK296678 CU692394	5428933	+	BC070334|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4	0.988195	CTCF.p2:8:0.988
chr11	11177645	11177790	reg1022192.p1	7.069	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-297931	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-298199	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-346920	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	465861	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	685299	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	685774	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.649437	CTCF.p2:-7:0.649
chr11	131116607	131116760	reg1022674.p1	7.069	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-330295	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-330338	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-798021	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	123786	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	663941	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	664656	+	NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin	0.854901	CTCF.p2:-18:0.855
chr1	26946824	26946939	reg1019447.p1	7.069	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	-74523	+	TSC_hg19_v1_chr1_+_26872335 AK092955	-74558	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-90546	+	NM_006015 NM_139135 AF231056	75641	+	AB210022 AF219114 AB051293 AF265208 TSC_hg19_v1_chr1_+_27024003	77088	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	154407	+	AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.861857	CTCF.p2:36:0.862
chr17	37320961	37321117	reg1020337.p1	7.069	+	TSC_hg19_v1_chr17_-_37307891 NM_020405	-13144	-	TSC_hg19_v1_chr17_-_37307863 BC036059	-13192	-	EU832116 EU832210 AK312999 TSC_hg19_v1_chr17_-_37307740 AF279144 AF378753 AY704670 AY704671	-13307	-	TSC_hg19_v1_chr17_+_37321318 AK093715	282	+	NM_001143968	1374	-	TSC_hg19_v1_chr17_-_37350083 AB209176	29054	-	NM_020405|PLXDC1|57125|plexin domain containing 1##BC036059|PLXDC1|57125|plexin domain containing 1##EU832116|PLXDC1|57125|plexin domain containing 1##EU832210|PLXDC1|57125|plexin domain containing 1##AK312999|PLXDC1|57125|plexin domain containing 1##AF279144|PLXDC1|57125|plexin domain containing 1##AF378753|PLXDC1|57125|plexin domain containing 1##AY704670|PLXDC1|57125|plexin domain containing 1##AY704671|PLXDC1|57125|plexin domain containing 1##AK093715|LOC284108|284108|uncharacterized LOC284108##NM_001143968|ARL5C|390790|ADP-ribosylation factor-like 5C##AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	0.688632	CTCF.p2:-6:0.689
chr2	166150360	166150456	reg1017542.p1	7.069	+	NM_021007	-68	+	AK289656 NM_001040142 DQ993531 BC029489 BC047398 BC048417	-54476	+	AF225986 AF225987 AK299757 TSC_hg19_v1_chr2_-_166060561 NM_001081676 NM_001081677 NM_006922 DQ993536	-89831	-	NM_001040143	1874	+	AK126129 NM_001172173 TSC_hg19_v1_chr2_+_166326207	175776	+	NM_024969 AK056655 TSC_hg19_v1_chr2_+_166428851	278441	+	NM_021007|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001040143|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3	0.994252	CTCF.p2:0:0.994
chr22	19483556	19483673	reg1020740.p1	7.069	+	AF053074 TSC_hg19_v1_chr22_+_19467483 AK302590 AF062495 CT841513 AB587488 BT006792 CU012976 CU013264 CU679577 DQ890621 DQ892651 DQ893790 DQ895890	-16135	+	AK293123 AK303274 NM_001178010 NM_001178011 NM_003504 TSC_hg19_v1_chr22_+_19467423 AY358971 BC006232 BC010022 AK293338 AF081535 AJ223728	-16176	+	TSC_hg19_v1_chr22_-_19466726 NM_001035247 NM_005659	-16878	-	BT007254 CU012981 CU013269 AB528106 AF000959 AK222466 BC002404 BC019290 BC032363 TSC_hg19_v1_chr22_-_19511925	28241	-	TSC_hg19_v1_chr22_-_19512001 CR456420	28416	-	AK092561 NM_001130861 NM_003277	29245	-	AF053074|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##AK302590|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##AF062495|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##CT841513|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##BT006792|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##CU012976|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##CU013264|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##DQ890621|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##DQ892651|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##DQ893790|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##DQ895890|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##AK293123|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##AK303274|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##NM_001178010|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##NM_001178011|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##NM_003504|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##AY358971|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##BC006232|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##BC010022|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##AK293338|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##AF081535|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##AJ223728|CDC45|8318|cell division cycle 45 homolog (S. cerevisiae)##NM_001035247|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##NM_005659|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##BT007254|CLDN5|7122|claudin 5##CU012981|CLDN5|7122|claudin 5##CU013269|CLDN5|7122|claudin 5##AF000959|CLDN5|7122|claudin 5##AK222466|CLDN5|7122|claudin 5##BC002404|CLDN5|7122|claudin 5##BC019290|CLDN5|7122|claudin 5##BC032363|CLDN5|7122|claudin 5##CR456420|CLDN5|7122|claudin 5##AK092561|CLDN5|7122|claudin 5##NM_001130861|CLDN5|7122|claudin 5##NM_003277|CLDN5|7122|claudin 5	0.407244	CTCF.p2:-18:0.407
chr5	162696789	162696896	reg1018679.p2	7.069	+	NM_000816 NM_198903 NM_198904 BC052926 BC036030 X15376 BC059389 BC069348 BC074795 AK315200 AK299640	-1201997	+	NM_001127648 AB590312 DQ890915	-1419083	+	NM_001127647	-1419451	+	TSC_hg19_v1_chr5_+_162864606 AK316234 NM_004060 NM_199246 AK297190 AK312913 BC007093 BX538035 D78341 L49504 BC000196	167779	+	AB528197 AM392736 AM393438 FJ215684 AK094647 TSC_hg19_v1_chr5_-_162887097	190236	-	AK311957 TSC_hg19_v1_chr5_-_162887119 BC017934 BX538290 NM_145266	190291	-	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127647|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK316234|CCNG1|900|cyclin G1##NM_004060|CCNG1|900|cyclin G1##NM_199246|CCNG1|900|cyclin G1##AK297190|CCNG1|900|cyclin G1##AK312913|CCNG1|900|cyclin G1##BC007093|CCNG1|900|cyclin G1##BX538035|CCNG1|900|cyclin G1##D78341|CCNG1|900|cyclin G1##L49504|CCNG1|900|cyclin G1##BC000196|CCNG1|900|cyclin G1##AM392736|NUDCD2|134492|NudC domain containing 2##AM393438|NUDCD2|134492|NudC domain containing 2##FJ215684|NUDCD2|134492|NudC domain containing 2##AK311957|NUDCD2|134492|NudC domain containing 2##BC017934|NUDCD2|134492|NudC domain containing 2##BX538290|NUDCD2|134492|NudC domain containing 2##NM_145266|NUDCD2|134492|NudC domain containing 2	0.0	
chr8	121963540	121963679	reg1022277.p1	7.069	+	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-139103	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-139339	-	TSC_hg19_v1_chr8_-_121824090 AB590740	-139546	-	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	690017	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	1830302	+	BC042145 TSC_hg19_v1_chr8_+_123794000	1830385	+	NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2	0.922917	CTCF.p2:4:0.923
chr10	21964214	21964343	reg1020035.p1	7.068	+	AY598745 CU687346 NM_001195626 AF060929 AF060934 AF060935 AF060936 AF060937 AF060938	-140653	+	TSC_hg19_v1_chr10_+_21823382 AB209755 BC052798 BC094844 BC129946	-140884	+	U13948 TSC_hg19_v1_chr10_+_21823274 BC065376 BC080577	-141002	+	AY225122 AK027263 TSC_hg19_v1_chr10_-_22292522 BC014436	328171	-	TSC_hg19_v1_chr10_-_22292660 BC110894 NM_022365 AK308369	328387	-	NM_001199938	534633	-	AY598745|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##NM_001195626|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060929|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060934|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060935|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060936|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060937|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060938|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AB209755|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC052798|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC094844|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC129946|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##U13948|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC065376|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC080577|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AY225122|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK027263|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC014436|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1	0.989379	CTCF.p2:9:0.989
chr2	210421230	210421340	reg1018191.p2	7.068	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	-132531	+	BC036811 NM_005048 U25128 HQ257935 AY497546	-1149624	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-1196660	+	BC110423 TSC_hg19_v1_chr2_+_210444185	22885	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	23109	+	TSC_hg19_v1_chr2_+_210636707 AK090815 AX746629 NM_032504 NM_182587	215423	+	NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##AK294181|PTH2R|5746|parathyroid hormone 2 receptor##BC110423|MAP2|4133|microtubule-associated protein 2##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2##AK090815|UNC80|285175|unc-80 homolog (C. elegans)##NM_032504|UNC80|285175|unc-80 homolog (C. elegans)##NM_182587|UNC80|285175|unc-80 homolog (C. elegans)	0.430648	CTCF.p2:-6:0.431
chr7	113414373	113414489	reg1019019.p1	7.068	+	TSC_hg19_v1_chr7_-_112758613 BC107860	-655802	-	TSC_hg19_v1_chr7_-_112758606 BC065765 BX537645	-655825	-	NM_001146265 NM_018970 TSC_hg19_v1_chr7_-_112727844	-686591	-	X78578 AF024579 HQ258594 BC070313 BC056666 NM_002711 BC126451 BC126453	144652	-	TSC_hg19_v1_chr7_+_113726381 AK131266	311990	+	TSC_hg19_v1_chr7_+_113726514 AF454830	312072	+	BC107860|LOC401397|401397|uncharacterized LOC401397##BC065765|LOC401397|401397|uncharacterized LOC401397##BX537645|LOC401397|401397|uncharacterized LOC401397##NM_001146265|GPR85|54329|G protein-coupled receptor 85##NM_018970|GPR85|54329|G protein-coupled receptor 85##X78578|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AF024579|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##HQ258594|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC070313|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC056666|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##NM_002711|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126451|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126453|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AK131266|FOXP2|93986|forkhead box P2##AF454830|FOXP2|93986|forkhead box P2	0.976269	CTCF.p2:5:0.976
chr1	149379173	149379292	reg1013550.p1	7.067	+	NM_001164261 NM_001164262	-573218	+	NM_001102663 AK290302 AY894562 AY894566	-639731	+	NM_001144032	-735222	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	19964	-	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	173791	+	X14355 AK311303 NM_000566 X14356 AK291451 BC032634 AB527585 BC152383 CU689454 DQ890842 DQ893997 L03418	375040	+	NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001144032|PPIAL4E|730262|peptidylprolyl isomerase A (cyclophilin A)-like 4E##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##X14355|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##NM_000566|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##X14356|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK291451|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC032634|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC152383|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ890842|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ893997|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##L03418|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)	0.0	
chr2	209238339	209238438	reg1018215.p1	7.067	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-13763	+	TSC_hg19_v1_chr2_+_209131083 AK127769	-107305	+	TSC_hg19_v1_chr2_+_209131009 AY457063 BC017736 BC032389 NM_001178000 NM_015040 NM_152671 BC125052 BC125053	-107392	+	BC036811 NM_005048 U25128 HQ257935 AY497546	33273	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	1050366	+	BC110423 TSC_hg19_v1_chr2_+_210444185	1205782	+	AK294181|PTH2R|5746|parathyroid hormone 2 receptor##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##AY457063|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC017736|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC032389|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001178000|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_015040|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_152671|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC125052|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC125053|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC110423|MAP2|4133|microtubule-associated protein 2	0.992281	CTCF.p2:5:0.992
chr7	93072185	93072291	reg1019702.p2	7.067	+	BC017888 NM_017667 NM_024553 TSC_hg19_v1_chr7_+_92861678 AK126478 AL833112 AK055965 AK299582 AB100163 BC108708 BC132740 BC132742 AB058764 BC152424 CU676100 AB385511	-210512	+	TSC_hg19_v1_chr7_-_92855783 AK096002 AK298361 NM_001039372	-216455	-	BC136300 BC136301 BC046365 AY358345 NM_198151 BC139906	-223373	-	AB022178 NM_001164738	116883	-	AB022177 AK313996 NM_001164737 NM_001742	131800	-	CU675117 DQ892533 DQ895744 L27624 AY691946 D29992 AK075427 AK024817 AK075425 AK092499 AK129833 AK313260 BC005330 NM_006528 TSC_hg19_v1_chr7_-_93520066	447791	-	BC017888|CCDC132|55610|coiled-coil domain containing 132##NM_017667|CCDC132|55610|coiled-coil domain containing 132##NM_024553|CCDC132|55610|coiled-coil domain containing 132##AK126478|CCDC132|55610|coiled-coil domain containing 132##AL833112|CCDC132|55610|coiled-coil domain containing 132##AK055965|CCDC132|55610|coiled-coil domain containing 132##AK299582|CCDC132|55610|coiled-coil domain containing 132##AB100163|CCDC132|55610|coiled-coil domain containing 132##BC108708|CCDC132|55610|coiled-coil domain containing 132##BC132740|CCDC132|55610|coiled-coil domain containing 132##BC132742|CCDC132|55610|coiled-coil domain containing 132##AB058764|CCDC132|55610|coiled-coil domain containing 132##BC152424|CCDC132|55610|coiled-coil domain containing 132##AK096002|HEPACAM2|253012|HEPACAM family member 2##AK298361|HEPACAM2|253012|HEPACAM family member 2##NM_001039372|HEPACAM2|253012|HEPACAM family member 2##BC136300|HEPACAM2|253012|HEPACAM family member 2##BC136301|HEPACAM2|253012|HEPACAM family member 2##BC046365|HEPACAM2|253012|HEPACAM family member 2##AY358345|HEPACAM2|253012|HEPACAM family member 2##NM_198151|HEPACAM2|253012|HEPACAM family member 2##BC139906|HEPACAM2|253012|HEPACAM family member 2##AB022178|CALCR|799|calcitonin receptor##NM_001164738|CALCR|799|calcitonin receptor##AB022177|CALCR|799|calcitonin receptor##AK313996|CALCR|799|calcitonin receptor##NM_001164737|CALCR|799|calcitonin receptor##NM_001742|CALCR|799|calcitonin receptor##DQ892533|TFPI2|7980|tissue factor pathway inhibitor 2##DQ895744|TFPI2|7980|tissue factor pathway inhibitor 2##L27624|TFPI2|7980|tissue factor pathway inhibitor 2##AY691946|TFPI2|7980|tissue factor pathway inhibitor 2##D29992|TFPI2|7980|tissue factor pathway inhibitor 2##AK075427|TFPI2|7980|tissue factor pathway inhibitor 2##AK024817|TFPI2|7980|tissue factor pathway inhibitor 2##AK075425|TFPI2|7980|tissue factor pathway inhibitor 2##AK092499|TFPI2|7980|tissue factor pathway inhibitor 2##AK129833|TFPI2|7980|tissue factor pathway inhibitor 2##AK313260|TFPI2|7980|tissue factor pathway inhibitor 2##BC005330|TFPI2|7980|tissue factor pathway inhibitor 2##NM_006528|TFPI2|7980|tissue factor pathway inhibitor 2	0.987594	CTCF.p2:-3:0.988
chr2	29461522	29461634	reg1015539.p1	7.066	+	TSC_hg19_v1_chr2_+_29338370 BC013862 NM_024692 AL834443	-123223	+	NM_001029883	-164452	-	AK296977 NM_199280	-257415	+	EU788003 EU788004 EU788005 EU788006 EU788007 EU788008 EU788009 EU788010 FJ838786 FJ838787 U62540 TSC_hg19_v1_chr2_-_30144453 AK296218 NM_004304	682876	-	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	908192	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	908255	+	BC013862|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_024692|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##AL834443|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71##AK296977|FAM179A|165186|family with sequence similarity 179, member A##NM_199280|FAM179A|165186|family with sequence similarity 179, member A##EU788003|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788004|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788005|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788006|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788007|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788008|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788009|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788010|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838786|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838787|ALK|238|anaplastic lymphoma receptor tyrosine kinase##U62540|ALK|238|anaplastic lymphoma receptor tyrosine kinase##AK296218|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_004304|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)	0.049127	
chr6	106283371	106283484	reg1018152.p2	7.066	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-432432	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-432469	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-432581	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	250769	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	250808	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	263377	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.032031	
chr2	220554517	220554640	reg1019605.p2	7.065	+	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-62224	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-91989	+	M13981 NM_002191 BC039076 BC006391 TSC_hg19_v1_chr2_+_220437031 BT006954 CU675381 DQ890602 DQ893773 M13144	-117532	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	1882432	-	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	2604442	-	AK057009 NM_153038 BC109388	2608334	+	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##M13981|INHA|3623|inhibin, alpha##NM_002191|INHA|3623|inhibin, alpha##BC039076|INHA|3623|inhibin, alpha##BC006391|INHA|3623|inhibin, alpha##BT006954|INHA|3623|inhibin, alpha##DQ890602|INHA|3623|inhibin, alpha##DQ893773|INHA|3623|inhibin, alpha##M13144|INHA|3623|inhibin, alpha##BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140	0.99736	CTCF.p2:16:0.997
chr7	31673648	31673772	reg1019872.p1	7.065	+	AK128026 NM_194300	-116733	+	AK055238 AF248954 NM_022728	-293188	-	TSC_hg19_v1_chr7_+_31092073 NM_001118 NM_001199635 NM_001199636 NM_001199637 AK290046 AK226138	-581606	+	NM_001145123 NM_006658	52920	+	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	436795	-	AK094180 NM_001191059 U40371 NM_005020	437301	-	AK128026|CCDC129|223075|coiled-coil domain containing 129##NM_194300|CCDC129|223075|coiled-coil domain containing 129##AK055238|NEUROD6|63974|neurogenic differentiation 6##AF248954|NEUROD6|63974|neurogenic differentiation 6##NM_022728|NEUROD6|63974|neurogenic differentiation 6##NM_001118|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199635|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199636|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001199637|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK290046|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##AK226138|ADCYAP1R1|117|adenylate cyclase activating polypeptide 1 (pituitary) receptor type I##NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa	0.994273	CTCF.p2:10:0.994
chr9	114360198	114360309	reg1018833.p1	7.065	+	AK092811 AX747743 AK291267 NM_001007169 NM_133464 TSC_hg19_v1_chr9_+_114287505 BC065738 BC020893 AB075842 BC152427 BC152433	-72778	+	NM_001080398	-113229	-	TSC_hg19_v1_chr9_-_114246233 AK122712	-113988	-	TSC_hg19_v1_chr9_-_114361678 BC035228 NM_012212	1437	-	D49387 AK091948 AK309450 TSC_hg19_v1_chr9_-_114361928	1664	-	AK309866 AK298379 AK289597 NM_001146108 NM_001146109	1864	-	AK092811|ZNF483|158399|zinc finger protein 483##AK291267|ZNF483|158399|zinc finger protein 483##NM_001007169|ZNF483|158399|zinc finger protein 483##NM_133464|ZNF483|158399|zinc finger protein 483##BC065738|ZNF483|158399|zinc finger protein 483##BC020893|ZNF483|158399|zinc finger protein 483##AB075842|ZNF483|158399|zinc finger protein 483##BC152427|ZNF483|158399|zinc finger protein 483##BC152433|ZNF483|158399|zinc finger protein 483##NM_001080398|KIAA0368|23392|KIAA0368##AK122712|KIAA0368|23392|KIAA0368##BC035228|PTGR1|22949|prostaglandin reductase 1##NM_012212|PTGR1|22949|prostaglandin reductase 1##D49387|PTGR1|22949|prostaglandin reductase 1##AK091948|PTGR1|22949|prostaglandin reductase 1##AK309450|PTGR1|22949|prostaglandin reductase 1##AK309866|PTGR1|22949|prostaglandin reductase 1##AK298379|PTGR1|22949|prostaglandin reductase 1##AK289597|PTGR1|22949|prostaglandin reductase 1##NM_001146108|PTGR1|22949|prostaglandin reductase 1##NM_001146109|PTGR1|22949|prostaglandin reductase 1	0.903753	CTCF.p2:-13:0.904
chr13	108880158	108880271	reg1019522.p1	7.064	+	TSC_hg19_v1_chr13_+_108870748 NM_032859 AK075195 BC022566	-9414	+	TSC_hg19_v1_chr13_-_108870697 BX648833 NM_001098268	-9517	-	AK292419 AK314844 BC037491 NM_206937	-12339	-	NM_001145645 NM_006573 TSC_hg19_v1_chr13_+_108922065 BC020674 AK309629 AY358881 AF186114 AF134715 AF132600 AF116456	41837	+	TSC_hg19_v1_chr13_+_108922237 AB590281 AF136293 AY129225 AY302751 CR541818 CU676630 DQ891413 EU176634 HM636064	42015	+	AY129226 TSC_hg19_v1_chr13_+_108922483	42271	+	NM_032859|ABHD13|84945|abhydrolase domain containing 13##AK075195|ABHD13|84945|abhydrolase domain containing 13##BC022566|ABHD13|84945|abhydrolase domain containing 13##BX648833|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_001098268|LIG4|3981|ligase IV, DNA, ATP-dependent##AK292419|LIG4|3981|ligase IV, DNA, ATP-dependent##AK314844|LIG4|3981|ligase IV, DNA, ATP-dependent##BC037491|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_206937|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_001145645|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##NM_006573|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##BC020674|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AK309629|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AY358881|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AF186114|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AF134715|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AF132600|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AF116456|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AF136293|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AY129225|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AY302751|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##CR541818|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##DQ891413|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##EU176634|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##HM636064|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AY129226|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b	0.962954	CTCF.p2:-16:0.963
chr15	100924133	100924226	reg1019117.p2	7.064	+	AB527357 AJ315735 NM_139057	-42036	-	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-650545	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-650575	-	BC034500 BC034970 NM_178842	160718	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	218230	-	NM_024708 NM_198243 TSC_hg19_v1_chr15_+_101142810 AK289860 BC063581 AF451994 AK026204 AK222958 AK222974 BC025252	218616	+	AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)##NM_024708|ASB7|140460|ankyrin repeat and SOCS box containing 7##NM_198243|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK289860|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC063581|ASB7|140460|ankyrin repeat and SOCS box containing 7##AF451994|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK026204|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222958|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222974|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC025252|ASB7|140460|ankyrin repeat and SOCS box containing 7	0.942893	CTCF.p2:-1:0.943
chr3	101100798	101100903	reg1020227.p1	7.064	+	AF173155 AB593127 NM_016247 DQ980603 DQ980602	-61428	-	CU688850 EU832117 EU832211 AK025204 AL833204 BC030221 TSC_hg19_v1_chr3_-_100712327 NM_015429	-388560	-	TSC_hg19_v1_chr3_+_100428396 BC041600 BC023599	-672386	+	AM392620 AM393440 TSC_hg19_v1_chr3_-_101232029 AK297356 BC129988 BC062674 BX537943 AL833577 AF199458 NM_001077203 NM_020654	131178	-	TSC_hg19_v1_chr3_+_101280711 BC035967 AF226052 NM_017819 AK000439 AF086243 AF155111	179867	+	AK098760 TSC_hg19_v1_chr3_+_101293023	192155	+	AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AB593127|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##EU832117|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##EU832211|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AK025204|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AL833204|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##BC030221|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##NM_015429|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##BC041600|TFG|10342|TRK-fused gene##BC023599|TFG|10342|TRK-fused gene##AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7##AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7##AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7##BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7##AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7##AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC035967|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF226052|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##NM_017819|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AK000439|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF086243|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF155111|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AK098760|PCNP|57092|PEST proteolytic signal containing nuclear protein	0.479253	CTCF.p2:24:0.479
chr8	7744556	7744677	reg1020081.p1	7.064	+	AF295370 AJ237673 NM_018661 AB037972 AB590071 AF217245 AF516673	-5691	+	AF301470 NM_001081551	-5891	+	NM_001081552 NM_058203 AJ635328 AF168617 BC125141 BC058833 AF168618 AF168619 AJ628017	-39134	+	BC069285 NM_004942 BC093985 BC093983 Z71389	7588	+	AK292586 NM_001193630	39242	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	341526	+	AF295370|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##AF301470|DEFB103B|55894|defensin, beta 103B##NM_001081551|DEFB103A|414325|defensin, beta 103A##NM_001081552|SPAG11A|653423|sperm associated antigen 11A##NM_058203|SPAG11B|10407|sperm associated antigen 11B##AJ635328|SPAG11B|10407|sperm associated antigen 11B##AF168617|SPAG11B|10407|sperm associated antigen 11B##BC125141|SPAG11A|653423|sperm associated antigen 11A##BC058833|SPAG11A|653423|sperm associated antigen 11A##AF168618|SPAG11A|653423|sperm associated antigen 11A##AF168619|SPAG11A|653423|sperm associated antigen 11A##AJ628017|SPAG11B|10407|sperm associated antigen 11B##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene	1.014548	CTCF.p2:3:0.996
chr17	61989112	61989200	reg1017639.p2	7.063	+	BC119747 BC029365 NM_001318 NM_022579 NM_022580 NM_022581 AX772828	-499	-	BT006926 J00118 BC002717 AK291587 BC005921 BC057768 BC062775 BC020756 NM_001317 M35419	-15205	-	AB451332 AB451477 AF006061 AF006060 M38451 BC020760 J03756 NM_002059 NM_022556 NM_022557 NM_022558 AK312194	-29965	-	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	7010	-	S52229 S79249 X83539 M80461 BC032651 BC002975 BC030210 AX775815 AX775817 AK222954 AK313583 AK223210 NM_000626 NM_001039933 NM_021602 M89957	20510	-	AY212253 M81758 NM_000334	61082	-	BC119747|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BC029365|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_001318|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022579|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022580|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022581|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BT006926|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##J00118|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC002717|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##AK291587|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC005921|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC057768|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC062775|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC020756|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##NM_001317|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##AB451332|GH2|2689|growth hormone 2##AB451477|GH2|2689|growth hormone 2##AF006061|GH2|2689|growth hormone 2##AF006060|GH2|2689|growth hormone 2##M38451|GH2|2689|growth hormone 2##BC020760|GH2|2689|growth hormone 2##J03756|GH2|2689|growth hormone 2##NM_002059|GH2|2689|growth hormone 2##NM_022556|GH2|2689|growth hormone 2##NM_022557|GH2|2689|growth hormone 2##NM_022558|GH2|2689|growth hormone 2##AK312194|GH2|2689|growth hormone 2##M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1##S52229|CD79B|974|CD79b molecule, immunoglobulin-associated beta##S79249|CD79B|974|CD79b molecule, immunoglobulin-associated beta##X83539|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M80461|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC032651|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC002975|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC030210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775815|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775817|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK222954|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK313583|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK223210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_000626|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_001039933|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_021602|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M89957|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	0.997589	CTCF.p2:19:0.998
chr17	79486448	79486585	reg1020463.p1	7.063	+	TSC_hg19_v1_chr17_-_79479865 NM_001199954 NM_001614	-6651	-	BC001920 BC015779 BC053572 BC015005 BC009848 BC010999 BC007442 BC012050 BC018774 BC015695 BC000292 AK304637 TSC_hg19_v1_chr17_-_79479829 AK291937 AK301175 X04098	-6711	-	BC023548 TSC_hg19_v1_chr17_-_79478994 BC039144	-7538	-	NM_001077182 NM_012418 AF030165 BC126295 BC130330 HQ258429	8970	+	AL834374 TSC_hg19_v1_chr17_-_79514725	28178	-	TSC_hg19_v1_chr17_-_79519415 AK024644 BC008883 DQ989324 NM_025161	32883	-	NM_001199954|ACTG1|71|actin, gamma 1##NM_001614|ACTG1|71|actin, gamma 1##BC001920|ACTG1|71|actin, gamma 1##BC015779|ACTG1|71|actin, gamma 1##BC053572|ACTG1|71|actin, gamma 1##BC015005|ACTG1|71|actin, gamma 1##BC009848|ACTG1|71|actin, gamma 1##BC010999|ACTG1|71|actin, gamma 1##BC007442|ACTG1|71|actin, gamma 1##BC012050|ACTG1|71|actin, gamma 1##BC018774|ACTG1|71|actin, gamma 1##BC015695|ACTG1|71|actin, gamma 1##BC000292|ACTG1|71|actin, gamma 1##AK304637|ACTG1|71|actin, gamma 1##AK291937|ACTG1|71|actin, gamma 1##AK301175|ACTG1|71|actin, gamma 1##X04098|ACTG1|71|actin, gamma 1##BC023548|ACTG1|71|actin, gamma 1##BC039144|ACTG1|71|actin, gamma 1##NM_001077182|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##NM_012418|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##AF030165|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC126295|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC130330|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##HQ258429|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##AL834374|C17orf70|80233|chromosome 17 open reading frame 70##AK024644|C17orf70|80233|chromosome 17 open reading frame 70##BC008883|C17orf70|80233|chromosome 17 open reading frame 70##DQ989324|C17orf70|80233|chromosome 17 open reading frame 70##NM_025161|C17orf70|80233|chromosome 17 open reading frame 70	0.781589	CTCF.p2:-41:0.764
chr2	232765290	232765421	reg1022242.p1	7.063	+	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-114239	+	TSC_hg19_v1_chr2_+_232646442 AK307486	-118918	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	-119430	-	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	25678	-	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	61005	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	478028	+	AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK307486|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental	0.138278	
chr1	196117654	196117786	reg1021568.p1	7.062	+	AF288390 BC022507 NM_003783	-2961988	-	TSC_hg19_v1_chr1_+_193091308 BC007325 AF312865 AK314772 AB590625 CU688012 EU831787 EU831865 BC011808	-3026364	+	TSC_hg19_v1_chr1_+_193091242 AK300929 BC065037	-3026481	+	EU251076 BC103947 BC103948 BC103949 BC103950 AY359444 NM_198503 BX647852 AK309729 TSC_hg19_v1_chr1_-_196577612	459805	-	TSC_hg19_v1_chr1_-_196577676 AK131498	459962	-	NM_000186 NM_001014975 TSC_hg19_v1_chr1_+_196621172 AK291395 AK225649 X07523 Y00716 BC037285 BC012610 BC110643 BC073982 BC142699 CU691466	503407	+	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC007325|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF312865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK314772|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831787|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK300929|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC065037|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU251076|KCNT2|343450|potassium channel, subfamily T, member 2##BC103947|KCNT2|343450|potassium channel, subfamily T, member 2##BC103948|KCNT2|343450|potassium channel, subfamily T, member 2##BC103949|KCNT2|343450|potassium channel, subfamily T, member 2##BC103950|KCNT2|343450|potassium channel, subfamily T, member 2##AY359444|KCNT2|343450|potassium channel, subfamily T, member 2##NM_198503|KCNT2|343450|potassium channel, subfamily T, member 2##BX647852|KCNT2|343450|potassium channel, subfamily T, member 2##AK309729|KCNT2|343450|potassium channel, subfamily T, member 2##AK131498|KCNT2|343450|potassium channel, subfamily T, member 2##NM_000186|CFH|3075|complement factor H##NM_001014975|CFH|3075|complement factor H##AK291395|CFH|3075|complement factor H##AK225649|CFH|3075|complement factor H##X07523|CFH|3075|complement factor H##Y00716|CFH|3075|complement factor H##BC037285|CFH|3075|complement factor H##BC012610|CFH|3075|complement factor H##BC110643|CFH|3075|complement factor H##BC073982|CFH|3075|complement factor H##BC142699|CFH|3075|complement factor H	0.975839	CTCF.p2:-12:0.976
chr14	93579774	93579914	reg1017459.p2	7.062	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-190247	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	-190400	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-319158	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	1747	-	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	2370	-	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	71356	-	AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1	0.15974	
chr22	40921386	40921511	reg1016715.p2	7.062	+	TSC_hg19_v1_chr22_-_40859427 AJ297257	-62018	-	TSC_hg19_v1_chr22_+_40766652 AK301042	-154793	+	TSC_hg19_v1_chr22_+_40766636 AY308849 BC008078	-154807	+	TSC_hg19_v1_chr22_-_41032681 AF368061	111205	-	TSC_hg19_v1_chr22_-_41032716 BC115039 NM_020831 AF448806 AB037859 BC064620 AJ297258	111256	-	AK314857 AF490537 NM_005297 BC001736 BC021146 AY745811 AY747629 CR456497 AB063174 CU013094 CU013382 AB463112 AY562945 BT006725 DQ893603 DQ895065	153773	+	AJ297257|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AK301042|SGSM3|27352|small G protein signaling modulator 3##AY308849|SGSM3|27352|small G protein signaling modulator 3##BC008078|SGSM3|27352|small G protein signaling modulator 3##AF368061|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC115039|MKL1|57591|megakaryoblastic leukemia (translocation) 1##NM_020831|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF448806|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AB037859|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC064620|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AJ297258|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AK314857|MCHR1|2847|melanin-concentrating hormone receptor 1##AF490537|MCHR1|2847|melanin-concentrating hormone receptor 1##NM_005297|MCHR1|2847|melanin-concentrating hormone receptor 1##BC001736|MCHR1|2847|melanin-concentrating hormone receptor 1##BC021146|MCHR1|2847|melanin-concentrating hormone receptor 1##AY745811|MCHR1|2847|melanin-concentrating hormone receptor 1##AY747629|MCHR1|2847|melanin-concentrating hormone receptor 1##CR456497|MCHR1|2847|melanin-concentrating hormone receptor 1##AB063174|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013094|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013382|MCHR1|2847|melanin-concentrating hormone receptor 1##AY562945|MCHR1|2847|melanin-concentrating hormone receptor 1##BT006725|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ893603|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ895065|MCHR1|2847|melanin-concentrating hormone receptor 1	0.977022	CTCF.p2:30:0.977
chr12	92968308	92968443	reg1018010.p1	7.061	+	AJ845168 NM_001025232	-146452	-	AJ845165 AJ845166 NM_001025233	-150641	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-428732	-	NM_001037671 NM_001178097	128243	+	NM_001004330 AK128530	161912	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	354563	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr20	46250053	46250187	reg1019283.p2	7.061	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-119436	+	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	-119498	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-264632	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	164632	-	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	165198	-	AB037836 TSC_hg19_v1_chr20_-_47444291	1194166	-	AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1	0.998353	CTCF.p2:-10:0.998
chr2	242549719	242549853	reg1022383.p1	7.061	+	TSC_hg19_v1_chr2_+_242498159 NM_032515 AF174487 BC006203 BC017214	-51567	+	TSC_hg19_v1_chr2_-_242448000 BC091505 AK315966 BC007852 NM_006374	-101755	-	TSC_hg19_v1_chr2_-_242447969 AK092161 AK302751 AK297374 AK301214 AK291808 AK291947	-101827	-	AK225608 AF132970 NM_001164356	7113	-	BC000767 BC001842 BC071896 BC094822 AK001216 TSC_hg19_v1_chr2_-_242572947	23076	-	TSC_hg19_v1_chr2_-_242576496 AF258556	26668	-	NM_032515|BOK|666|BCL2-related ovarian killer##AF174487|BOK|666|BCL2-related ovarian killer##BC006203|BOK|666|BCL2-related ovarian killer##BC017214|BOK|666|BCL2-related ovarian killer##BC091505|STK25|10494|serine/threonine kinase 25##AK315966|STK25|10494|serine/threonine kinase 25##BC007852|STK25|10494|serine/threonine kinase 25##NM_006374|STK25|10494|serine/threonine kinase 25##AK092161|STK25|10494|serine/threonine kinase 25##AK302751|STK25|10494|serine/threonine kinase 25##AK297374|STK25|10494|serine/threonine kinase 25##AK301214|STK25|10494|serine/threonine kinase 25##AK291808|STK25|10494|serine/threonine kinase 25##AK291947|STK25|10494|serine/threonine kinase 25##AK225608|THAP4|51078|THAP domain containing 4##AF132970|THAP4|51078|THAP domain containing 4##NM_001164356|THAP4|51078|THAP domain containing 4##BC000767|THAP4|51078|THAP domain containing 4##BC001842|THAP4|51078|THAP domain containing 4##BC071896|THAP4|51078|THAP domain containing 4##BC094822|THAP4|51078|THAP domain containing 4##AK001216|THAP4|51078|THAP domain containing 4##AF258556|THAP4|51078|THAP domain containing 4	0.0	
chr4	136339651	136339784	reg1020127.p1	7.061	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-1216799	-	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	-2266434	+	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	-2269261	+	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	2113875	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	2113925	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	2823647	-	NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	0.945459	CTCF.p2:-4:0.855
chr9	113911373	113911522	reg1021912.p1	7.061	+	TSC_hg19_v1_chr9_-_113801481 AK290287	-109945	-	AK298590 TSC_hg19_v1_chr9_-_113801086	-110414	-	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	-111035	-	BC111086 NM_205859	179265	-	TSC_hg19_v1_chr9_-_114245830 AK308313	334381	-	TSC_hg19_v1_chr9_-_114246233 AK122712	334818	-	AK290287|LPAR1|1902|lysophosphatidic acid receptor 1##AK298590|LPAR1|1902|lysophosphatidic acid receptor 1##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1##BC111086|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2##NM_205859|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2##AK308313|KIAA0368|23392|KIAA0368##AK122712|KIAA0368|23392|KIAA0368	0.018395	
chr12	48045570	48045683	reg1018301.p1	7.060	+	TSC_hg19_v1_chr12_+_47610379 BC016154 AK307166	-435295	+	BC008360 NM_138371	-435575	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	-572043	-	TSC_hg19_v1_chr12_-_48099790 BC056415 AK025561 AK299465	54141	-	TSC_hg19_v1_chr12_-_48099814 BC003680	54188	-	TSC_hg19_v1_chr12_-_48099819 NM_001146075 NM_001146076 NM_024604	54205	-	BC016154|FAM113B|91523|family with sequence similarity 113, member B##BC008360|FAM113B|91523|family with sequence similarity 113, member B##NM_138371|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC056415|RPAP3|79657|RNA polymerase II associated protein 3##AK025561|RPAP3|79657|RNA polymerase II associated protein 3##AK299465|RPAP3|79657|RNA polymerase II associated protein 3##BC003680|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146075|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146076|RPAP3|79657|RNA polymerase II associated protein 3##NM_024604|RPAP3|79657|RNA polymerase II associated protein 3	0.977096	CTCF.p2:-22:0.977
chr2	112879380	112879489	reg1019337.p2	7.060	+	TSC_hg19_v1_chr2_+_112813153 AK290294 AY429534 AY429535	-66247	+	TSC_hg19_v1_chr2_+_112812903 BC115373	-66487	+	NM_032824 AK027587 TSC_hg19_v1_chr2_+_112812871	-66593	+	TSC_hg19_v1_chr2_+_112895958 AK094759 NM_001128165 NM_153214 BC035784	16555	+	TSC_hg19_v1_chr2_+_112896040 BC126986 BC126987	16665	+	BC032001 AK315329 AF334161 NM_032494	133198	-	AK290294|TMEM87B|84910|transmembrane protein 87B##AY429534|TMEM87B|84910|transmembrane protein 87B##AY429535|TMEM87B|84910|transmembrane protein 87B##BC115373|TMEM87B|84910|transmembrane protein 87B##NM_032824|TMEM87B|84910|transmembrane protein 87B##AK027587|TMEM87B|84910|transmembrane protein 87B##AK094759|FBLN7|129804|fibulin 7##NM_001128165|FBLN7|129804|fibulin 7##NM_153214|FBLN7|129804|fibulin 7##BC035784|FBLN7|129804|fibulin 7##BC126986|FBLN7|129804|fibulin 7##BC126987|FBLN7|129804|fibulin 7##BC032001|ZC3H8|84524|zinc finger CCCH-type containing 8##AK315329|ZC3H8|84524|zinc finger CCCH-type containing 8##AF334161|ZC3H8|84524|zinc finger CCCH-type containing 8##NM_032494|ZC3H8|84524|zinc finger CCCH-type containing 8	0.989243	CTCF.p2:3:0.989
chr12	49389321	49389461	reg1021332.p1	7.059	+	NM_005430	-17156	+	U81787 NM_003394 AK312906	-23793	-	TSC_hg19_v1_chr12_-_49351310 M74491	-38087	-	AB527129 AB018292 BC136398 BC136399 TSC_hg19_v1_chr12_-_49393076 NM_015086 BC039264	3609	-	TSC_hg19_v1_chr12_-_49412538 AK293332 NM_001206710 AK303276 AK307994 AK310250 BC000358 AK097606 NM_001206709 NM_002733	23180	-	AF010403 NM_003482	59715	-	NM_005430|WNT1|7471|wingless-type MMTV integration site family, member 1##U81787|WNT10B|7480|wingless-type MMTV integration site family, member 10B##NM_003394|WNT10B|7480|wingless-type MMTV integration site family, member 10B##AK312906|WNT10B|7480|wingless-type MMTV integration site family, member 10B##M74491|ARF3|377|ADP-ribosylation factor 3##AB018292|DDN|23109|dendrin##BC136398|DDN|23109|dendrin##BC136399|DDN|23109|dendrin##NM_015086|DDN|23109|dendrin##BC039264|DDN|23109|dendrin##AK293332|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206710|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK303276|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK307994|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK310250|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##BC000358|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK097606|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206709|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_002733|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2	0.283481	CTCF.p2:-9:0.252
chr3	38697303	38697447	reg1019363.p1	7.059	+	M77235 NM_000335 NM_001099404 NM_001099405 NM_198056 BC051374 NM_001160160 NM_001160161	-6235	-	TSC_hg19_v1_chr3_+_38537982 AK315814	-159395	+	BC015820 TSC_hg19_v1_chr3_+_38537851 BC065368 AK023235 AK289602	-159525	+	AF117907 NM_006514	138125	-	AF109737 AF150882 NM_014139	294676	-	TSC_hg19_v1_chr3_+_39093498 AB040882 AK025513 AK297349 AK298810 AK302307 BC026353 NM_020839 BC037168 AB385469 AF468833 AL832926	396126	+	M77235|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_000335|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099404|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099405|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_198056|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##BC051374|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160160|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160161|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##AK315814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC015820|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC065368|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK023235|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK289602|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AF117907|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##NM_006514|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AB040882|WDR48|57599|WD repeat domain 48##AK025513|WDR48|57599|WD repeat domain 48##AK297349|WDR48|57599|WD repeat domain 48##AK298810|WDR48|57599|WD repeat domain 48##AK302307|WDR48|57599|WD repeat domain 48##BC026353|WDR48|57599|WD repeat domain 48##NM_020839|WDR48|57599|WD repeat domain 48##BC037168|WDR48|57599|WD repeat domain 48##AF468833|WDR48|57599|WD repeat domain 48##AL832926|WDR48|57599|WD repeat domain 48	0.999013	CTCF.p2:25:0.999
chr2	144270780	144270901	reg1020064.p1	7.058	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	-383849	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	-383910	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-635600	+	NM_024659	724065	-	AY281366 NM_001006636	781219	-	BC017741 AK291357 TSC_hg19_v1_chr2_-_145090037 BC061699	819192	-	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1##AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1##BC017741|GTDC1|79712|glycosyltransferase-like domain containing 1##AK291357|GTDC1|79712|glycosyltransferase-like domain containing 1##BC061699|GTDC1|79712|glycosyltransferase-like domain containing 1	0.567455	CTCF.p2:4:0.567
chr5	140787456	140787579	reg1021639.p1	7.058	+	TSC_hg19_v1_chr5_+_140782367 BC132769 AF152329 AF152516 NM_018921 NM_032089	-5074	+	BC093877 BC093879 AB384865 AF152334 AF152521 NM_018925 NM_032099	-9869	+	NM_014004 NM_032088	-16035	+	AF152335 AF152522 NM_018926 NM_032100	252	+	TSC_hg19_v1_chr5_+_140792580 BC014509 BC093873 BC093875 AF152319 AF152503 NM_018913 NM_032090	5107	+	TSC_hg19_v1_chr5_+_140797217 NM_032101	9699	+	BC132769|PCDHGA9|56107|protocadherin gamma subfamily A, 9##AF152329|PCDHGA9|56107|protocadherin gamma subfamily A, 9##AF152516|PCDHGA9|56107|protocadherin gamma subfamily A, 9##NM_018921|PCDHGA9|56107|protocadherin gamma subfamily A, 9##NM_032089|PCDHGA9|56107|protocadherin gamma subfamily A, 9##BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5##BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5##AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5##AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5##NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5##NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5##NM_014004|PCDHGA8|9708|protocadherin gamma subfamily A, 8##NM_032088|PCDHGA8|9708|protocadherin gamma subfamily A, 8##AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6##AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6##NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6##NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6##BC014509|PCDHGA10|56106|protocadherin gamma subfamily A, 10##BC093873|PCDHGA10|56106|protocadherin gamma subfamily A, 10##BC093875|PCDHGA10|56106|protocadherin gamma subfamily A, 10##AF152319|PCDHGA10|56106|protocadherin gamma subfamily A, 10##AF152503|PCDHGA10|56106|protocadherin gamma subfamily A, 10##NM_018913|PCDHGA10|56106|protocadherin gamma subfamily A, 10##NM_032090|PCDHGA10|56106|protocadherin gamma subfamily A, 10##NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7	0.0	
chr6	28652098	28652237	reg1023685.p1	7.058	+	AK056369 BX647791 AY517631 NM_052923	-97079	-	AJ005277 BC128159 BC128160 NM_001509 NM_003996 AB463692	-158379	+	BC133691 BC148315 AY324826 NM_182701	-168601	-	CU680626 CU688196 DQ890982 DQ894156 AB528391 TSC_hg19_v1_chr6_-_28891498	239302	-	AF230393 AF230394 J03407 TSC_hg19_v1_chr6_-_28891717 AB209885 BC013580 AJ420519	239513	-	TSC_hg19_v1_chr6_-_28891741 BC066924 AX776009 AX776011 NM_006510	239600	-	AK056369|SCAND3|114821|SCAN domain containing 3##BX647791|SCAND3|114821|SCAN domain containing 3##AY517631|SCAND3|114821|SCAN domain containing 3##NM_052923|SCAND3|114821|SCAN domain containing 3##AJ005277|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC128159|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC128160|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##NM_001509|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##NM_003996|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC133691|GPX6|257202|glutathione peroxidase 6 (olfactory)##BC148315|GPX6|257202|glutathione peroxidase 6 (olfactory)##AY324826|GPX6|257202|glutathione peroxidase 6 (olfactory)##NM_182701|GPX6|257202|glutathione peroxidase 6 (olfactory)##DQ890982|TRIM27|5987|tripartite motif containing 27##DQ894156|TRIM27|5987|tripartite motif containing 27##AF230393|TRIM27|5987|tripartite motif containing 27##AF230394|TRIM27|5987|tripartite motif containing 27##J03407|TRIM27|5987|tripartite motif containing 27##AB209885|TRIM27|5987|tripartite motif containing 27##BC013580|TRIM27|5987|tripartite motif containing 27##AJ420519|TRIM27|5987|tripartite motif containing 27##BC066924|TRIM27|5987|tripartite motif containing 27##AX776009|TRIM27|5987|tripartite motif containing 27##AX776011|TRIM27|5987|tripartite motif containing 27##NM_006510|TRIM27|5987|tripartite motif containing 27	0.133535	
chr11	31261984	31262121	reg1019396.p1	7.057	+	BX647348 NM_020869	-247820	-	TSC_hg19_v1_chr11_-_30607762 AB209163 AK314833 NM_001145399	-654207	-	TSC_hg19_v1_chr11_-_30605748 AK309809	-656304	-	AY247970 AK126066 NM_181807	129286	-	TSC_hg19_v1_chr11_+_31391404 NM_181706 AK123087 AL833128 AK289665 BC036571 BC044931 BC063804	129350	+	AK311611 BC023595 TSC_hg19_v1_chr11_-_31531154 AK310496 AK057788 NM_144981	269092	-	BX647348|DCDC5|100506627|doublecortin domain containing 5##NM_020869|DCDC5|100506627|doublecortin domain containing 5##AB209163|MPPED2|744|metallophosphoesterase domain containing 2##AK314833|MPPED2|744|metallophosphoesterase domain containing 2##NM_001145399|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2##AY247970|DCDC1|341019|doublecortin domain containing 1##NM_181807|DCDC1|341019|doublecortin domain containing 1##NM_181706|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK123087|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AL833128|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK289665|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC036571|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC044931|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC063804|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK311611|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC023595|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK310496|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK057788|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_144981|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	0.12695	
chr15	40630351	40630448	reg1017559.p1	7.057	+	TSC_hg19_v1_chr15_-_40630272 BC140897 BC140902 AK126035	-97	-	TSC_hg19_v1_chr15_-_40600137 AK291657 NM_004573	-30254	-	TSC_hg19_v1_chr15_-_40600085 BC009009	-30312	-	TSC_hg19_v1_chr15_-_40633122 AK125329 NM_207380	2745	-	TSC_hg19_v1_chr15_+_40643233 NM_001145643 BC061640	12836	+	TSC_hg19_v1_chr15_+_40650431 NM_033510 AB051529 BC151833	20023	+	BC140897|C15orf52|388115|chromosome 15 open reading frame 52##BC140902|C15orf52|388115|chromosome 15 open reading frame 52##AK126035|C15orf52|388115|chromosome 15 open reading frame 52##AK291657|PLCB2|5330|phospholipase C, beta 2##NM_004573|PLCB2|5330|phospholipase C, beta 2##BC009009|PLCB2|5330|phospholipase C, beta 2##AK125329|C15orf52|388115|chromosome 15 open reading frame 52##NM_207380|C15orf52|388115|chromosome 15 open reading frame 52##NM_001145643|PHGR1|644844|proline/histidine/glycine-rich 1##BC061640|PHGR1|644844|proline/histidine/glycine-rich 1##NM_033510|DISP2|85455|dispatched homolog 2 (Drosophila)##AB051529|DISP2|85455|dispatched homolog 2 (Drosophila)##BC151833|DISP2|85455|dispatched homolog 2 (Drosophila)	1.036474	CTCF.p2:31:0.998
chr8	73907235	73907361	reg1019239.p2	7.057	+	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	-457655	+	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	-919464	-	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-1150590	-	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	13814	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	98144	-	BC150551 BC150552 NM_001243237	264438	-	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84##BC150551|LOC100130301|100130301|uncharacterized LOC100130301##BC150552|LOC100130301|100130301|uncharacterized LOC100130301##NM_001243237|LOC100130301|100130301|uncharacterized LOC100130301	0.986422	CTCF.p2:-2:0.986
chr1	178512218	178512398	reg1006827.p4	7.056	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-30042	+	AF047711 NM_004841 AK290308	-201674	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-448667	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	182065	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	327838	-	TSC_hg19_v1_chr1_+_178995028 AB007944	482712	+	AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##BC110611|RASAL2|9462|RAS protein activator like 2##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##AB007944|FAM20B|9917|family with sequence similarity 20, member B	0.0	
chr20	10457206	10457349	reg1019559.p2	7.056	+	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-41301	+	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	-42438	-	AF221993 NM_018848	-44708	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	196927	-	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	197292	-	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1414172	+	BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3	0.0	
chr20	52346178	52346359	reg1018454.p1	7.056	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-135469	-	AF041259 NM_006526	-146633	-	AK302570 NM_001193421	-544447	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	340794	-	AK315220 NM_003657	341035	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	444252	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr8	24086969	24087105	reg1020491.p1	7.056	+	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	-374726	-	AB464642 NM_001136271	-522927	-	AB464643 AF249669 AF249670 AF249671 AF249672 EU446642 U91540 U80669 BC074863 BC074864 BC111569 BC111574 AF247704 NM_006167 TSC_hg19_v1_chr8_-_23540449	-546606	-	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	64570	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	154870	+	BC058037 AK292492 NM_003817 AF215824 CU691292 AB527100	211494	+	BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1##AB464642|NKX2-6|137814|NK2 homeobox 6##NM_001136271|NKX2-6|137814|NK2 homeobox 6##AF249669|NKX3-1|4824|NK3 homeobox 1##AF249670|NKX3-1|4824|NK3 homeobox 1##AF249671|NKX3-1|4824|NK3 homeobox 1##AF249672|NKX3-1|4824|NK3 homeobox 1##EU446642|NKX3-1|4824|NK3 homeobox 1##U91540|NKX3-1|4824|NK3 homeobox 1##U80669|NKX3-1|4824|NK3 homeobox 1##BC074863|NKX3-1|4824|NK3 homeobox 1##BC074864|NKX3-1|4824|NK3 homeobox 1##AF247704|NKX3-1|4824|NK3 homeobox 1##NM_006167|NKX3-1|4824|NK3 homeobox 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1##BC058037|ADAM7|8756|ADAM metallopeptidase domain 7##AK292492|ADAM7|8756|ADAM metallopeptidase domain 7##NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7##AF215824|ADAM7|8756|ADAM metallopeptidase domain 7	0.996855	CTCF.p2:10:0.997
chr8	24835309	24835417	reg1019096.p1	7.056	+	AY156690 CU688222 CU691684 AB463926 DQ892646 DQ895884 AK075003 AK127430 AK225975 AK299095 AK314591 BC039237 BC066952 TSC_hg19_v1_chr8_-_24814127 AK057731 NM_006158	-21283	-	TSC_hg19_v1_chr8_+_24774588 AF181990	-60730	+	NM_001105541 AK294681	-62888	+	TSC_hg19_v1_chr8_+_25042229 BC015352	206794	+	TSC_hg19_v1_chr8_+_25042294 BC011877 NM_024940 AK123607	206914	+	BC137175 BC137176 TSC_hg19_v1_chr8_+_25042406	207037	+	AY156690|NEFL|4747|neurofilament, light polypeptide##DQ892646|NEFL|4747|neurofilament, light polypeptide##DQ895884|NEFL|4747|neurofilament, light polypeptide##AK075003|NEFL|4747|neurofilament, light polypeptide##AK127430|NEFL|4747|neurofilament, light polypeptide##AK225975|NEFL|4747|neurofilament, light polypeptide##AK299095|NEFL|4747|neurofilament, light polypeptide##AK314591|NEFL|4747|neurofilament, light polypeptide##BC039237|NEFL|4747|neurofilament, light polypeptide##BC066952|NEFL|4747|neurofilament, light polypeptide##AK057731|NEFL|4747|neurofilament, light polypeptide##NM_006158|NEFL|4747|neurofilament, light polypeptide##AF181990|NEFM|4741|neurofilament, medium polypeptide##NM_001105541|NEFM|4741|neurofilament, medium polypeptide##AK294681|NEFM|4741|neurofilament, medium polypeptide##BC015352|DOCK5|80005|dedicator of cytokinesis 5##BC011877|DOCK5|80005|dedicator of cytokinesis 5##NM_024940|DOCK5|80005|dedicator of cytokinesis 5##AK123607|DOCK5|80005|dedicator of cytokinesis 5##BC137175|DOCK5|80005|dedicator of cytokinesis 5##BC137176|DOCK5|80005|dedicator of cytokinesis 5	0.754979	CTCF.p2:23:0.755
chr1	27659417	27659510	reg1018693.p1	7.055	+	TSC_hg19_v1_chr1_+_27648756 EU831420 EU831513 AF251699 AK222642 AK307077 BX648289	-10647	+	AL136683 BC011579 BC090039 TSC_hg19_v1_chr1_+_27648745	-10730	+	TSC_hg19_v1_chr1_+_27648669 NM_032125 AK313110 AK303821	-10812	+	TSC_hg19_v1_chr1_+_27668486 NM_001193308 NM_032872	9012	+	TSC_hg19_v1_chr1_+_27668575 AK027902 AK096437 AY037157 BC035725	9074	+	AB208805 TSC_hg19_v1_chr1_-_27692832	33367	-	EU831420|TMEM222|84065|transmembrane protein 222##EU831513|TMEM222|84065|transmembrane protein 222##AF251699|TMEM222|84065|transmembrane protein 222##AK222642|TMEM222|84065|transmembrane protein 222##AK307077|TMEM222|84065|transmembrane protein 222##BX648289|LOC644961|644961|actin, beta pseudogene##AL136683|TMEM222|84065|transmembrane protein 222##BC011579|TMEM222|84065|transmembrane protein 222##BC090039|TMEM222|84065|transmembrane protein 222##NM_032125|TMEM222|84065|transmembrane protein 222##AK313110|TMEM222|84065|transmembrane protein 222##AK303821|TMEM222|84065|transmembrane protein 222##NM_001193308|SYTL1|84958|synaptotagmin-like 1##NM_032872|SYTL1|84958|synaptotagmin-like 1##AK027902|SYTL1|84958|synaptotagmin-like 1##AK096437|SYTL1|84958|synaptotagmin-like 1##AY037157|SYTL1|84958|synaptotagmin-like 1##BC035725|SYTL1|84958|synaptotagmin-like 1##AB208805|MAP3K6|9064|mitogen-activated protein kinase kinase kinase 6	0.100777	
chr14	39701008	39701124	reg1019340.p1	7.055	+	AK304622 TSC_hg19_v1_chr14_+_39649841	-51290	+	TSC_hg19_v1_chr14_+_39644403 NM_002687 AK292579 AK223612 U77718 BC062602 Y09703 Y10351	-56637	+	AK310730 TSC_hg19_v1_chr14_-_39639538 AK294339 AL833179 BC047328 BX161510 AK315900 BX248013 AK056690 NM_001079537 NM_177452 BC030604	-61494	-	AK314069 BX648228 NM_054024 BC035981 BC130537 BC130563 AB527370 AM393252 AM393582 HQ258350 AF390175	2152	+	NM_203354 AK298935 BX640994 BX648014 AL832233	33427	+	AF338233 NM_001247988 NM_203356	34434	+	AK304622|PNN|5411|pinin, desmosome associated protein##NM_002687|PNN|5411|pinin, desmosome associated protein##AK292579|PNN|5411|pinin, desmosome associated protein##AK223612|PNN|5411|pinin, desmosome associated protein##U77718|PNN|5411|pinin, desmosome associated protein##BC062602|PNN|5411|pinin, desmosome associated protein##Y09703|PNN|5411|pinin, desmosome associated protein##AK310730|TRAPPC6B|122553|trafficking protein particle complex 6B##AK294339|TRAPPC6B|122553|trafficking protein particle complex 6B##AL833179|TRAPPC6B|122553|trafficking protein particle complex 6B##BC047328|TRAPPC6B|122553|trafficking protein particle complex 6B##BX161510|TRAPPC6B|122553|trafficking protein particle complex 6B##AK315900|TRAPPC6B|122553|trafficking protein particle complex 6B##BX248013|TRAPPC6B|122553|trafficking protein particle complex 6B##AK056690|TRAPPC6B|122553|trafficking protein particle complex 6B##NM_001079537|TRAPPC6B|122553|trafficking protein particle complex 6B##NM_177452|TRAPPC6B|122553|trafficking protein particle complex 6B##BC030604|TRAPPC6B|122553|trafficking protein particle complex 6B##AK314069|MIA2|117153|melanoma inhibitory activity 2##BX648228|MIA2|117153|melanoma inhibitory activity 2##NM_054024|MIA2|117153|melanoma inhibitory activity 2##BC035981|MIA2|117153|melanoma inhibitory activity 2##BC130537|MIA2|117153|melanoma inhibitory activity 2##BC130563|MIA2|117153|melanoma inhibitory activity 2##AM393252|MIA2|117153|melanoma inhibitory activity 2##AM393582|MIA2|117153|melanoma inhibitory activity 2##HQ258350|MIA2|117153|melanoma inhibitory activity 2##AF390175|MIA2|117153|melanoma inhibitory activity 2##NM_203354|CTAGE5|4253|CTAGE family, member 5##AK298935|CTAGE5|4253|CTAGE family, member 5##BX640994|CTAGE5|4253|CTAGE family, member 5##BX648014|CTAGE5|4253|CTAGE family, member 5##AL832233|CTAGE5|4253|CTAGE family, member 5##AF338233|CTAGE5|4253|CTAGE family, member 5##NM_001247988|CTAGE5|4253|CTAGE family, member 5##NM_203356|CTAGE5|4253|CTAGE family, member 5	0.043866	
chr2	224644727	224644817	reg1017582.p1	7.055	+	TSC_hg19_v1_chr2_-_224467145 NM_003469	-177593	-	TSC_hg19_v1_chr2_-_224467100 BC022509	-177665	-	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	-177706	-	AF393369 BC021898 TSC_hg19_v1_chr2_-_224702284 AK025338 AK299026	57477	-	TSC_hg19_v1_chr2_-_224702300 BC009606 NM_001039569	57538	-	TSC_hg19_v1_chr2_-_224810010 AF411977 AB527455 CU691898	165221	-	NM_003469|SCG2|7857|secretogranin II##BC022509|SCG2|7857|secretogranin II##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II##AF393369|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##BC021898|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK025338|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK299026|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##BC009606|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##NM_001039569|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AF411977|WDFY1|57590|WD repeat and FYVE domain containing 1	0.999894	CTCF.p2:-7:0.919
chr4	170487592	170487728	reg1021471.p1	7.055	+	TSC_hg19_v1_chr4_-_170192202 NM_020870	-295440	-	AK021429 TSC_hg19_v1_chr4_-_170192108	-295553	-	TSC_hg19_v1_chr4_-_170192099 BC053671	-295613	-	BC015147 BC114491 AB067488 CR933642 AL050385 TSC_hg19_v1_chr4_-_170533735 BC068201 CR936672	45976	-	TSC_hg19_v1_chr4_-_170533762 NM_001199397 NM_001199398 NM_001199399 NM_001199400 NM_012224	46109	-	TSC_hg19_v1_chr4_+_170541683 NM_001243372 NM_001829 NM_173872	54011	+	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1##AK021429|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1##BC015147|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC114491|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AB067488|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR933642|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AL050385|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC068201|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR936672|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199397|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199398|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199399|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199400|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_012224|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001243372|CLCN3|1182|chloride channel 3##NM_001829|CLCN3|1182|chloride channel 3##NM_173872|CLCN3|1182|chloride channel 3	0.981479	CTCF.p2:-5:0.981
chrX	68758212	68758347	reg1020796.p2	7.055	+	AF087142 NM_015686 BC136518 BC136519	-33196	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	-372973	-	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	-709424	+	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	77656	+	AB528121 AY605053 NM_001002254	511505	-	AK098697 NM_207320 BC137355 BC137356	524063	+	AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A##AY605053|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##NM_001002254|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##AK098697|OTUD6A|139562|OTU domain containing 6A##NM_207320|OTUD6A|139562|OTU domain containing 6A##BC137355|OTUD6A|139562|OTU domain containing 6A##BC137356|OTUD6A|139562|OTU domain containing 6A	0.789585	CTCF.p2:-23:0.790
chr13	77901305	77901474	reg1020063.p1	7.054	+	NM_015057 TSC_hg19_v1_chr13_-_77901230	-186	-	TSC_hg19_v1_chr13_-_77601303 AK314442 NM_012158	-300058	-	TSC_hg19_v1_chr13_-_77601295 AL833187 BC063796 BC072448	-300107	-	NM_001160706 NM_003843 NM_144777 BC020726 AF045941 AK025320 AK222720 AK301659	208462	+	TSC_hg19_v1_chr13_+_78271822 NM_001242868	370515	+	AK294201 NM_001040153	371626	+	NM_015057|MYCBP2|23077|MYC binding protein 2##AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3##AL833187|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC063796|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC072448|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_001160706|SCEL|8796|sciellin##NM_003843|SCEL|8796|sciellin##NM_144777|SCEL|8796|sciellin##BC020726|SCEL|8796|sciellin##AF045941|SCEL|8796|sciellin##AK025320|SCEL|8796|sciellin##AK222720|SCEL|8796|sciellin##AK301659|SCEL|8796|sciellin##NM_001242868|SLAIN1|122060|SLAIN motif family, member 1##AK294201|SLAIN1|122060|SLAIN motif family, member 1##NM_001040153|SLAIN1|122060|SLAIN motif family, member 1	0.775739	CTCF.p2:78:0.776
chr16	87111024	87111118	reg1019845.p1	7.054	+	BC100027 NM_005250	-498957	+	BC113437 BC113439 NM_005251	-510215	+	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	-522299	-	TSC_hg19_v1_chr16_-_87350760 AB528835 AM392822 AM393070	239729	-	TSC_hg19_v1_chr16_-_87350999 BC015536 AK026130 NM_001195124 NM_001195125	239915	-	TSC_hg19_v1_chr16_-_87417364 AY736035 AF428140 BC012748 BC002985 NM_024735	306291	-	BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AM392822|C16orf95|100506581|chromosome 16 open reading frame 95##AM393070|C16orf95|100506581|chromosome 16 open reading frame 95##BC015536|C16orf95|100506581|chromosome 16 open reading frame 95##AK026130|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195124|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195125|C16orf95|100506581|chromosome 16 open reading frame 95##AY736035|FBXO31|79791|F-box protein 31##AF428140|FBXO31|79791|F-box protein 31##BC012748|FBXO31|79791|F-box protein 31##BC002985|FBXO31|79791|F-box protein 31##NM_024735|FBXO31|79791|F-box protein 31	0.975954	CTCF.p2:0:0.854
chr17	54857692	54857812	reg1018407.p1	7.054	+	AK314080 NM_005450 TSC_hg19_v1_chr17_+_54671080	-186683	+	NM_153228 AK095654	-626916	+	TSC_hg19_v1_chr17_+_53828441 AF114430 NM_001102402 AK058120 BC005112	-1029152	+	BC093905 BC093907 NM_001085430	35497	-	BC041467 TSC_hg19_v1_chr17_-_54911271	53521	-	TSC_hg19_v1_chr17_+_54911515 NM_003647 BC022297 AK310668 AK293039 U49379	53752	+	AK314080|NOG|9241|noggin##NM_005450|NOG|9241|noggin##NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AF114430|PCTP|58488|phosphatidylcholine transfer protein##NM_001102402|PCTP|58488|phosphatidylcholine transfer protein##AK058120|PCTP|58488|phosphatidylcholine transfer protein##BC005112|PCTP|58488|phosphatidylcholine transfer protein##BC093905|C17orf67|339210|chromosome 17 open reading frame 67##BC093907|C17orf67|339210|chromosome 17 open reading frame 67##NM_001085430|C17orf67|339210|chromosome 17 open reading frame 67##BC041467|C17orf67|339210|chromosome 17 open reading frame 67##NM_003647|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##BC022297|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##AK310668|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##AK293039|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##U49379|DGKE|8526|diacylglycerol kinase, epsilon 64kDa	0.991619	CTCF.p2:3:0.992
chr1	11380342	11380444	reg1016768.p1	7.053	+	TSC_hg19_v1_chr1_+_11333566 BC004468 BT006832	-46848	+	TSC_hg19_v1_chr1_+_11333254 AK222808 NM_013319 AK074890 AF117064	-47077	+	TSC_hg19_v1_chr1_-_11322609 NM_004958	-57786	-	TSC_hg19_v1_chr1_+_11539211 AB593117 AK311332 AB037758 NM_020780	158842	+	AB463629 CR542110 CU692940 DQ892848 DQ892849 DQ896095 TSC_hg19_v1_chr1_-_11714417	334013	-	AK055344 NM_183412	334038	+	BC004468|UBIAD1|29914|UbiA prenyltransferase domain containing 1##BT006832|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK222808|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_013319|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK074890|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AF117064|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_004958|MTOR|2475|mechanistic target of rapamycin (serine/threonine kinase)##AB593117|PTCHD2|57540|patched domain containing 2##AB037758|PTCHD2|57540|patched domain containing 2##NM_020780|PTCHD2|57540|patched domain containing 2##CR542110|FBXO2|26232|F-box protein 2##DQ892848|FBXO2|26232|F-box protein 2##DQ892849|FBXO2|26232|F-box protein 2##DQ896095|FBXO2|26232|F-box protein 2##AK055344|FBXO44|93611|F-box protein 44##NM_183412|FBXO44|93611|F-box protein 44	0.992295	CTCF.p2:13:0.992
chr12	1626424	1626532	reg1019328.p1	7.053	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-526026	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-567652	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-609396	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	76873	-	AY009399 NM_030775	99743	+	BC001749 NM_032642	111933	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.989092	CTCF.p2:9:0.989
chr20	44977725	44977860	reg1019149.p1	7.053	+	TSC_hg19_v1_chr20_-_44937138 AK289584	-40622	-	BC136526 NM_021248	-97464	-	TSC_hg19_v1_chr20_+_44746952 AK222896 AJ300189 AB209660 AB590222 AX781593 AY225405 BT019901 DQ891804 DQ894988	-230827	+	TSC_hg19_v1_chr20_-_44993030 AK300798 AF132949 AK222928 AK301022 BC021138 BC014191 AF455052 AK300207 AK315726 NM_015945 NM_173073 NM_173179	15243	-	AB058737 TSC_hg19_v1_chr20_-_45035232	57424	-	TSC_hg19_v1_chr20_-_45035244 AK057032	57450	-	AK289584|CDH22|64405|cadherin 22, type 2##BC136526|CDH22|64405|cadherin 22, type 2##NM_021248|CDH22|64405|cadherin 22, type 2##AK222896|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AJ300189|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AB209660|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AY225405|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BT019901|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ891804|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ894988|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AK300798|SLC35C2|51006|solute carrier family 35, member C2##AF132949|SLC35C2|51006|solute carrier family 35, member C2##AK222928|SLC35C2|51006|solute carrier family 35, member C2##AK301022|SLC35C2|51006|solute carrier family 35, member C2##BC021138|SLC35C2|51006|solute carrier family 35, member C2##BC014191|SLC35C2|51006|solute carrier family 35, member C2##AF455052|SLC35C2|51006|solute carrier family 35, member C2##AK300207|SLC35C2|51006|solute carrier family 35, member C2##AK315726|SLC35C2|51006|solute carrier family 35, member C2##NM_015945|SLC35C2|51006|solute carrier family 35, member C2##NM_173073|SLC35C2|51006|solute carrier family 35, member C2##NM_173179|SLC35C2|51006|solute carrier family 35, member C2##AB058737|ELMO2|63916|engulfment and cell motility 2##AK057032|ELMO2|63916|engulfment and cell motility 2	0.97145	CTCF.p2:11:0.971
chr2	22578836	22578964	reg1016266.p1	7.053	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-1311971	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-1312001	-	TSC_hg19_v1_chr2_-_21266818 AB587530 HM487065 M14081 M14162 BC051278	-1312079	-	NM_052920	1029397	+	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	1571046	-	TSC_hg19_v1_chr2_+_24150144 BC037901	1571257	+	AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##HM487065|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14081|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14162|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC051278|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A	0.999951	CTCF.p2:-13:1.000
chr2	234885464	234885605	reg1021805.p1	7.053	+	AY090109 NM_024080 BC126342 BC143819	-59489	+	TSC_hg19_v1_chr2_-_234777033 AK301707	-108497	-	TSC_hg19_v1_chr2_-_234777018 AK316372	-108523	-	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	73853	+	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	520185	-	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	975124	+	AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##AK301707|MSL3P1|151507|male-specific lethal 3 homolog (Drosophila) pseudogene 1##AK316372|MSL3P1|151507|male-specific lethal 3 homolog (Drosophila) pseudogene 1##AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4	0.043801	
chr22	43486320	43486438	reg1020030.p2	7.053	+	TSC_hg19_v1_chr22_-_43485410 AF104927 AF173935 AK315658 BC009058 AK095996 BC014968 AL136687 NM_012263	-992	-	TSC_hg19_v1_chr22_-_43411156 NM_001184970	-75202	-	TSC_hg19_v1_chr22_-_43411136 AF128536	-75240	-	NM_001197 TSC_hg19_v1_chr22_+_43506755 BC001599 U49730 U34584	20393	+	TSC_hg19_v1_chr22_-_43539355 BC030985 AL359401 AL359403 AK314059	52973	-	TSC_hg19_v1_chr22_-_43539392 BC042195	53013	-	AF104927|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AF173935|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK315658|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC009058|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK095996|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC014968|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AL136687|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_012263|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_001184970|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001197|BIK|638|BCL2-interacting killer (apoptosis-inducing)##BC001599|BIK|638|BCL2-interacting killer (apoptosis-inducing)##U49730|BIK|638|BCL2-interacting killer (apoptosis-inducing)##U34584|BIK|638|BCL2-interacting killer (apoptosis-inducing)##BC030985|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AL359401|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AL359403|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AK314059|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##BC042195|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)	0.963344	CTCF.p2:0:0.963
chr4	115305904	115306036	reg1019847.p2	7.053	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-405131	-	TSC_hg19_v1_chr4_-_114682923 NM_001221 NM_172114 NM_172115 NM_172127 NM_172128 NM_172129	-623000	-	TSC_hg19_v1_chr4_-_114682619 AK055642 AB209288	-623314	-	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	213613	+	NM_003360 U30930	237552	+	BC113075 BC012326 AK289670 AB036429 NM_022569	729011	-	AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##NM_001221|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172114|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172115|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172127|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172128|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172129|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK055642|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AB209288|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	0.806257	CTCF.p2:20:0.806
chr4	22609072	22609201	reg1022074.p1	7.053	+	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	-91582	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	-658752	-	BX648990 DQ148490 NM_001035003	-909819	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	85456	+	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	1282517	-	AF279891 TSC_hg19_v1_chr4_-_24586127	1976940	-	AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##NM_147182|KCNIP4|80333|Kv channel interacting protein 4##BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.409194	CTCF.p2:18:0.251
chrUn_gl000242	42254	42358	reg1020739.p1	7.053	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.228714	
chr16	12629589	12629769	reg1019368.p1	7.052	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-559106	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-570595	+	NM_001130007	-619161	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	267972	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	268040	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	365789	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr16	46835494	46835617	reg1018558.p1	7.052	+	AB451455 BC109096 BC109097 AJ247087 NM_182493	-53393	-	AF139658 TSC_hg19_v1_chr16_+_46723600 BC039032 BC063565 AK310633 AK021946 AB528212 AM392646 AM392910 AM393245 AM393680 AM393794 CU687764	-111958	+	BC050725 NM_014321 AK024019 TSC_hg19_v1_chr16_+_46723570 AK024077	-111990	+	TSC_hg19_v1_chr16_-_46865090 CU691166 BC056676 BX647945 NM_001001436	29533	-	TSC_hg19_v1_chr16_+_46918291 AY029173 NM_133443 BC062555	82726	+	NM_001142466 AK094971	83547	+	AB451455|MYLK3|91807|myosin light chain kinase 3##BC109096|MYLK3|91807|myosin light chain kinase 3##BC109097|MYLK3|91807|myosin light chain kinase 3##AJ247087|MYLK3|91807|myosin light chain kinase 3##NM_182493|MYLK3|91807|myosin light chain kinase 3##AF139658|ORC6|23594|origin recognition complex, subunit 6##BC039032|ORC6|23594|origin recognition complex, subunit 6##BC063565|ORC6|23594|origin recognition complex, subunit 6##AK310633|ORC6|23594|origin recognition complex, subunit 6##AK021946|ORC6|23594|origin recognition complex, subunit 6##AM392646|ORC6|23594|origin recognition complex, subunit 6##AM392910|ORC6|23594|origin recognition complex, subunit 6##AM393245|PPA2|27068|pyrophosphatase (inorganic) 2##AM393680|ORC6|23594|origin recognition complex, subunit 6##AM393794|PPA2|27068|pyrophosphatase (inorganic) 2##BC050725|ORC6|23594|origin recognition complex, subunit 6##NM_014321|ORC6|23594|origin recognition complex, subunit 6##AK024019|ORC6|23594|origin recognition complex, subunit 6##AK024077|ORC6|23594|origin recognition complex, subunit 6##BC056676|C16orf87|388272|chromosome 16 open reading frame 87##BX647945|C16orf87|388272|chromosome 16 open reading frame 87##NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87##AY029173|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##NM_133443|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##BC062555|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##NM_001142466|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##AK094971|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2	0.906128	CTCF.p2:3:0.906
chr19	17865691	17865826	reg1017867.p1	7.052	+	NM_001161359 NM_015122 TSC_hg19_v1_chr19_+_17862326 AK316458 BC041130	-3442	+	TSC_hg19_v1_chr19_+_17858564 NM_001161357 NM_001161358 AK291410 BC028021	-7207	+	DQ387861 NM_018174 AL834233 BC067115 TSC_hg19_v1_chr19_+_17830310 BC080547 AJ440784 AK027623 BC113952 AK308975	-35449	+	TSC_hg19_v1_chr19_+_17905918 NM_014256	40158	+	TSC_hg19_v1_chr19_+_17905971 AK075466 AK314323 AK075434 AB015630 AK225421 AB049585 AY358955 BC066876 BC067423 AK225478	40201	+	BC032810 BC040435 BC053345 BC061886 BC106721 BC071706 BC106722 NM_005543 S72482 AK302780 AY082014	66589	-	NM_001161359|FCHO1|23149|FCH domain only 1##NM_015122|FCHO1|23149|FCH domain only 1##AK316458|FCHO1|23149|FCH domain only 1##BC041130|FCHO1|23149|FCH domain only 1##NM_001161357|FCHO1|23149|FCH domain only 1##NM_001161358|FCHO1|23149|FCH domain only 1##AK291410|FCHO1|23149|FCH domain only 1##BC028021|FCHO1|23149|FCH domain only 1##DQ387861|MAP1S|55201|microtubule-associated protein 1S##NM_018174|MAP1S|55201|microtubule-associated protein 1S##AL834233|MAP1S|55201|microtubule-associated protein 1S##BC067115|MAP1S|55201|microtubule-associated protein 1S##BC080547|MAP1S|55201|microtubule-associated protein 1S##AJ440784|MAP1S|55201|microtubule-associated protein 1S##AK027623|MAP1S|55201|microtubule-associated protein 1S##BC113952|MAP1S|55201|microtubule-associated protein 1S##AK308975|MAP1S|55201|microtubule-associated protein 1S##NM_014256|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK075466|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK314323|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK075434|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AB015630|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK225421|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AB049585|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AY358955|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC066876|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC067423|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK225478|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC032810|INSL3|3640|insulin-like 3 (Leydig cell)##BC040435|INSL3|3640|insulin-like 3 (Leydig cell)##BC053345|INSL3|3640|insulin-like 3 (Leydig cell)##BC061886|INSL3|3640|insulin-like 3 (Leydig cell)##BC106721|INSL3|3640|insulin-like 3 (Leydig cell)##BC071706|INSL3|3640|insulin-like 3 (Leydig cell)##BC106722|INSL3|3640|insulin-like 3 (Leydig cell)##NM_005543|INSL3|3640|insulin-like 3 (Leydig cell)##S72482|INSL3|3640|insulin-like 3 (Leydig cell)##AK302780|INSL3|3640|insulin-like 3 (Leydig cell)##AY082014|INSL3|3640|insulin-like 3 (Leydig cell)	0.145028	
chr8	57700197	57700316	reg1019498.p2	7.051	+	BC107706 TSC_hg19_v1_chr8_-_57359201 AK309758 AK314908 NM_001135690	-341027	-	CR541808 CR541828 DQ890865 DQ890871 DQ894027 BC032505 NM_006211	-341705	-	TSC_hg19_v1_chr8_+_57358383 AK091563 AX747062	-341884	+	AY032885 TSC_hg19_v1_chr8_-_57906227	206000	-	TSC_hg19_v1_chr8_-_57906381 BC017797	206122	-	BC067814 TSC_hg19_v1_chr8_-_57906402	206146	-	BC107706|PENK|5179|proenkephalin##AK314908|PENK|5179|proenkephalin##NM_001135690|PENK|5179|proenkephalin##CR541808|PENK|5179|proenkephalin##CR541828|PENK|5179|proenkephalin##DQ890865|PENK|5179|proenkephalin##DQ890871|PENK|5179|proenkephalin##DQ894027|PENK|5179|proenkephalin##BC032505|PENK|5179|proenkephalin##NM_006211|PENK|5179|proenkephalin##AY032885|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1	0.985836	CTCF.p2:-3:0.986
chr1	27611090	27611257	reg1000081.p1	7.050	+	TSC_hg19_v1_chr1_+_27561153 BC032523	-50011	+	TSC_hg19_v1_chr1_+_27561124 AK315564	-50046	+	NM_015023 TSC_hg19_v1_chr1_+_27561056	-50139	+	TSC_hg19_v1_chr1_+_27648669 NM_032125 AK313110 AK303821	37478	+	AL136683 BC011579 BC090039 TSC_hg19_v1_chr1_+_27648745	37560	+	TSC_hg19_v1_chr1_+_27648756 EU831420 EU831513 AF251699 AK222642 AK307077 BX648289	37643	+	BC032523|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##NM_032125|TMEM222|84065|transmembrane protein 222##AK313110|TMEM222|84065|transmembrane protein 222##AK303821|TMEM222|84065|transmembrane protein 222##AL136683|TMEM222|84065|transmembrane protein 222##BC011579|TMEM222|84065|transmembrane protein 222##BC090039|TMEM222|84065|transmembrane protein 222##EU831420|TMEM222|84065|transmembrane protein 222##EU831513|TMEM222|84065|transmembrane protein 222##AF251699|TMEM222|84065|transmembrane protein 222##AK222642|TMEM222|84065|transmembrane protein 222##AK307077|TMEM222|84065|transmembrane protein 222##BX648289|LOC644961|644961|actin, beta pseudogene	0.0	
chr17	28339048	28339164	reg1020430.p1	7.050	+	NM_198529 BX648689 BC137519	-70402	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	-81973	-	AK302745 AK303060 NM_001145053 AK299608	-82210	+	TSC_hg19_v1_chr17_+_28443846 AK297102 AL136806 NM_032141 AK094552 BC062425 AK313963 BC105044 BC105046 BC143417 BC143539 BC046116 BC040118 AF161358 BC016313 AB462988 AM392705 AM392719 CR533555	104735	+	NM_001045	223847	-	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	279853	-	NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AK297102|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AL136806|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_032141|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK094552|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC062425|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK313963|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105044|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105046|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143417|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143539|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC046116|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC040118|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AF161358|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC016313|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392705|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392719|NSRP1|84081|nuclear speckle splicing regulatory protein 1##CR533555|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_001045|SLC6A4|6532|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase	0.830068	CTCF.p2:2:0.830
chr2	119027119	119027235	reg1021006.p1	7.050	+	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-181114	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-255444	-	TSC_hg19_v1_chr2_-_118771677 BC028609	-255493	-	NM_001426	578581	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	672643	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	889227	-	AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC028609|CCDC93|54520|coiled-coil domain containing 93##NM_001426|EN1|2019|engrailed homeobox 1##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2	0.0	
chr22	22763766	22763879	reg1019410.p1	7.050	+	TSC_hg19_v1_chr22_+_22758538 GU179344	-5258	+	TSC_hg19_v1_chr22_+_22735207 BC073784 BC073795 X57815 AY204758 S63730 X57819 X57817	-28592	+	X59706 TSC_hg19_v1_chr22_+_22735202	-28619	+	TSC_hg19_v1_chr22_+_22764097 M97923 M97922 BC020233 BC022098 X80306 BC012876 BC073769 BC073770 X57811 AF490938 AJ131057 JF806287 U96044 L26900 L26908 L26901 HM996154 HM996200 HM996261 HM996384 HM996406 HM996445 AB064022 AY686890 HM996105 AB027448 AB063983 AB064005 AB114461 AB114463 AB114465 AB114467 AB114468 AB114470 AB114471 AB114472 AB363370 AB363380 AB363386 AB363387 AB363389 AB363390 AB363392 AB363393 AB363394 AF058065 AF058066 AF058067 AF060124 AF060127 AF063768 AF064495 AF064499 AF320834 AF320844 AF362765 AF394198 AJ238330 AJ276100 AJ298041 AJ399845 AJ399849 AJ399852 AJ399856 AJ399867 AJ399868 AJ399869 AM040515 AM040578 AM181362 AM181366 AY028996 AY942050 AY942088 AY942095 AY942098 AY942100 AY942127 DQ098691 DQ098693 DQ098745 DQ098749 DQ098786 DQ187499 DQ187503 DQ187571 DQ187623 DQ187624 DQ187625 DQ187626 DQ187694 DQ187719 DQ187722 DQ187723 DQ322742 DQ322810 DQ322821 DQ322822 DQ322823 DQ322874 DQ323004 DQ490721 DQ490722 DQ490723 DQ840923 DQ840924 DQ840925 DQ840930 DQ840933 DQ840937 DQ841069 DQ841085 DQ841092 DQ841094 DQ841095 DQ841098 DQ841102 DQ841104 DQ841105 DQ841106 DQ841107 DQ841108 DQ841109 DQ841110 DQ841111 DQ841112 DQ841114 DQ841115 DQ841116 DQ841117 EF589403 EF589431 EF589450 EF589512 EF589542 EF589558 EF710775 EF710776 EF710777 EF710778 EF710779 EF710780 EF710781 EF710782 EF711006 EF711007 EF711008 EF711009 EU599322 FJ385471 S73120 X91132 Z18835 DQ098692 X91133 DQ098695 HM996447 U09885 AF044481 AF044482 AF044483 AJ580928 X83712 X83713 AB114466 AY942023 AY062351 AY998675 DQ098694 DQ098812 DQ098765 AJ241371 X92997 X93002 X93004 AJ298616 U70235 AY062352 AY998672 AF103597 AF103703 AF103635 FJ385549 AF032355 AF103626 AF103705 AF103676 AF043584 AF103615 AF103648 AF103650 AF103714 AF043585 AF043587 AF043588 AF052823 AF043583 AY180392 AF043592 S42404 AF043589 AF043591	422	+	TSC_hg19_v1_chr22_+_22786291 L22588	22467	+	TSC_hg19_v1_chr22_-_22863061 BC040020	99259	-	X57817|IGLJ3|28831|immunoglobulin lambda joining 3##BC040020|ZNF280B|140883|zinc finger protein 280B	0.968859	CTCF.p2:3:0.969
chr6	10256463	10256578	reg1019325.p1	7.050	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-1820632	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-1820812	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-2153730	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	156096	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	158755	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	158948	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.940962	CTCF.p2:27:0.941
chr7	130560201	130560306	reg1020493.p2	7.050	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-141326	-	AF294347 AF431815 BC038415 NM_052933	-188898	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-206658	-	TSC_hg19_v1_chr7_-_130792857 BC047367	232606	-	AK294384 NM_001145354	234601	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	452353	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.033276	
chr20	12188580	12188720	reg1017054.p1	7.049	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-290093	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	-317201	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-1534081	-	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	800991	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	1013773	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	1430914	-	AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1	0.0	
chr3	2310623	2310740	reg1019877.p2	7.049	+	NM_001206955	-30169	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	-170120	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	-1176018	+	AK095729 TSC_hg19_v1_chr3_+_2553286	242599	+	NM_001206956 NM_175613 AK057278 AK314396 BC026119	623228	+	AK304256 NM_000564 NM_001243099 NM_175724 NM_175725 NM_175726 NM_175727 NM_175728	841376	-	NM_001206955|CNTN4|152330|contactin 4##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##AK095729|CNTN4|152330|contactin 4##NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4##AK304256|IL5RA|3568|interleukin 5 receptor, alpha##NM_000564|IL5RA|3568|interleukin 5 receptor, alpha##NM_001243099|IL5RA|3568|interleukin 5 receptor, alpha##NM_175724|IL5RA|3568|interleukin 5 receptor, alpha##NM_175725|IL5RA|3568|interleukin 5 receptor, alpha##NM_175726|IL5RA|3568|interleukin 5 receptor, alpha##NM_175727|IL5RA|3568|interleukin 5 receptor, alpha##NM_175728|IL5RA|3568|interleukin 5 receptor, alpha	0.898746	CTCF.p2:-20:0.899
chr5	68710775	68710910	reg1019534.p1	7.049	+	AF085736 NM_133339	-43562	+	NM_133340 NM_133341 AJ001642 AJ004977 AF098533 AF098534	-43954	+	AF076838 NM_002873	-44311	+	NM_001038603 NM_001244734 AK055094 BC033689 DQ682656 DQ682657 AK292962	104	+	NM_002538 U53823	77276	+	U49184 TSC_hg19_v1_chr5_+_68788631 NM_001205254 AK313501 BC029886 AK290697	77705	+	AF085736|RAD17|5884|RAD17 homolog (S. pombe)##NM_133339|RAD17|5884|RAD17 homolog (S. pombe)##NM_133340|RAD17|5884|RAD17 homolog (S. pombe)##NM_133341|RAD17|5884|RAD17 homolog (S. pombe)##AJ001642|RAD17|5884|RAD17 homolog (S. pombe)##AJ004977|RAD17|5884|RAD17 homolog (S. pombe)##AF098533|RAD17|5884|RAD17 homolog (S. pombe)##AF098534|RAD17|5884|RAD17 homolog (S. pombe)##AF076838|RAD17|5884|RAD17 homolog (S. pombe)##NM_002873|RAD17|5884|RAD17 homolog (S. pombe)##NM_001038603|MARVELD2|153562|MARVEL domain containing 2##NM_001244734|MARVELD2|153562|MARVEL domain containing 2##AK055094|MARVELD2|153562|MARVEL domain containing 2##BC033689|MARVELD2|153562|MARVEL domain containing 2##DQ682656|MARVELD2|153562|MARVEL domain containing 2##DQ682657|MARVELD2|153562|MARVEL domain containing 2##AK292962|MARVELD2|153562|MARVEL domain containing 2##NM_002538|OCLN|100506658|occludin##U53823|OCLN|100506658|occludin##U49184|OCLN|100506658|occludin##NM_001205254|OCLN|100506658|occludin##AK313501|OCLN|100506658|occludin##BC029886|OCLN|100506658|occludin##AK290697|OCLN|100506658|occludin	0.537246	CTCF.p2:-19:0.537
chr6_qbl_hap6	4184841	4184939	reg1018531.p1	7.049	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.003703	CTCF.p2:13:0.960
chr10	55599324	55599446	reg1019223.p1	7.048	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-1067959	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-1525270	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-2140038	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	961613	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	1759389	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	2521629	-	AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor	0.938225	CTCF.p2:16:0.938
chr20	49192552	49192660	reg1020627.p1	7.048	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	-65601	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-65674	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-65687	+	AK056792 NM_080829	60819	-	TSC_hg19_v1_chr20_-_49308074 AK124347	115471	-	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	155463	+	BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	0.999466	CTCF.p2:-3:0.999
chr6	162116167	162116289	reg1019521.p1	7.048	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	-421168	-	AK094629 TSC_hg19_v1_chr6_-_161413451	-702815	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-703370	+	AK057286 NM_001080378 NM_152410 BC044227	1031941	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	1032499	-	TSC_hg19_v1_chr6_-_163148797 AB245403 AK292590 BC022014	1032550	-	AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB245403|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AK292590|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##BC022014|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.974735	CTCF.p2:13:0.975
chr15	50437693	50437830	reg1020353.p1	7.047	+	TSC_hg19_v1_chr15_-_50411492 BC144298 BC144297 NM_024837	-26295	-	AB075819 TSC_hg19_v1_chr15_-_50405521	-32245	-	TSC_hg19_v1_chr15_+_49913254 NM_001144955 NM_020234 BC018028 AF168717 AK290184 BC093073 BC032535	-524512	+	TSC_hg19_v1_chr15_+_50474425 AK290262 NM_001159629 NM_003645 AF096290 AK222859 D88308 AK223145 BC057770 CU691220	36729	+	AK308833 NM_002112	120400	-	TSC_hg19_v1_chr15_-_50647062 BC068063 BC009935 AK000900	209308	-	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4##AB075819|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_001144955|DTWD1|56986|DTW domain containing 1##NM_020234|DTWD1|56986|DTW domain containing 1##BC018028|DTWD1|56986|DTW domain containing 1##AF168717|DTWD1|56986|DTW domain containing 1##AK290184|DTWD1|56986|DTW domain containing 1##BC093073|DTWD1|56986|DTW domain containing 1##BC032535|DTWD1|56986|DTW domain containing 1##AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK308833|HDC|3067|histidine decarboxylase##NM_002112|HDC|3067|histidine decarboxylase##BC068063|FLJ10038|55056|uncharacterized protein FLJ10038##BC009935|FLJ10038|55056|uncharacterized protein FLJ10038##AK000900|FLJ10038|55056|uncharacterized protein FLJ10038	0.999552	CTCF.p2:20:1.000
chr8	50213779	50213935	reg1022063.p1	7.047	+	NM_001007176 BC017981 AJ276240	-228948	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-379947	-	AK021829 BC025676 BC029586 AK316037 AK299659 AK307101 NM_001142857 NM_024593	-566064	-	AJ003030 NM_018967	610739	+	EU170240 AY877349 NM_144651	2508096	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	2597745	-	NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##AK021829|EFCAB1|79645|EF-hand calcium binding domain 1##BC025676|EFCAB1|79645|EF-hand calcium binding domain 1##BC029586|EFCAB1|79645|EF-hand calcium binding domain 1##AK316037|EFCAB1|79645|EF-hand calcium binding domain 1##AK299659|EFCAB1|79645|EF-hand calcium binding domain 1##AK307101|EFCAB1|79645|EF-hand calcium binding domain 1##NM_001142857|EFCAB1|79645|EF-hand calcium binding domain 1##NM_024593|EFCAB1|79645|EF-hand calcium binding domain 1##AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.654254	CTCF.p2:3:0.654
chr8	69403054	69403158	reg1019012.p1	7.047	+	BC041961 NM_001195639 NM_052958	-160150	+	AK294299 TSC_hg19_v1_chr8_+_68864738	-538376	+	TSC_hg19_v1_chr8_+_68864614 AY570973	-538473	+	AK095341 NM_001128204 NM_015170 TSC_hg19_v1_chr8_+_70378858 AF545571	975759	+	TSC_hg19_v1_chr8_+_70379077 AK307951	975974	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	1001933	+	BC041961|C8orf34|116328|chromosome 8 open reading frame 34##NM_001195639|C8orf34|116328|chromosome 8 open reading frame 34##NM_052958|C8orf34|116328|chromosome 8 open reading frame 34##AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AK095341|SULF1|23213|sulfatase 1##NM_001128204|SULF1|23213|sulfatase 1##NM_015170|SULF1|23213|sulfatase 1##AF545571|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1	0.987317	CTCF.p2:-13:0.987
chr21	29889451	29889554	reg1020125.p1	7.046	+	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	-1550063	-	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	-1671790	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	-1672031	-	TSC_hg19_v1_chr21_-_30257688 AB590951 BC011554 AK314100 AK225515 AF139682 NM_013240 NM_182749	368161	-	BC007525 AB384515 TSC_hg19_v1_chr21_-_30365185 AF161350 AB018257 BC150284 AB621822 BC029371 BC140790 AK001915 BC031633 NM_015565	475691	-	CU676110 TSC_hg19_v1_chr21_-_30391645 AF212232 BC012546 Y19009 BC017912 AK000056 AL355727 NM_016940 AK223357	502145	-	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##BC007525|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF161350|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AB018257|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC150284|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC029371|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC140790|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AK001915|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC031633|LTN1|26046|listerin E3 ubiquitin protein ligase 1##NM_015565|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF212232|RWDD2B|10069|RWD domain containing 2B##BC012546|RWDD2B|10069|RWD domain containing 2B##Y19009|RWDD2B|10069|RWD domain containing 2B##BC017912|RWDD2B|10069|RWD domain containing 2B##AK000056|RWDD2B|10069|RWD domain containing 2B##AL355727|RWDD2B|10069|RWD domain containing 2B##NM_016940|RWDD2B|10069|RWD domain containing 2B##AK223357|RWDD2B|10069|RWD domain containing 2B	0.984667	CTCF.p2:-1:0.985
chr15	41849907	41850004	reg1019493.p1	7.045	+	TSC_hg19_v1_chr15_-_41836465 AK022794 NM_015540 AK308884	-13491	-	AB037824 TSC_hg19_v1_chr15_-_41836456 AK290224 BC000246	-13506	-	BC143903 D16105 AK314006 BC045607 X60702 AK296892 NM_001135685 NM_002344 NM_206961	-43917	-	TSC_hg19_v1_chr15_+_41851415 NM_006293 D17517 BC051756 BC034960 BC049368 U05682 AB384948 CU690612 D50479	1380	+	TSC_hg19_v1_chr15_+_41952628 NM_001080541 NM_001164273	102650	+	TSC_hg19_v1_chr15_+_41952661 AK055203	102697	+	AK022794|RPAP1|26015|RNA polymerase II associated protein 1##NM_015540|RPAP1|26015|RNA polymerase II associated protein 1##AK308884|RPAP1|26015|RNA polymerase II associated protein 1##AB037824|RPAP1|26015|RNA polymerase II associated protein 1##AK290224|RPAP1|26015|RNA polymerase II associated protein 1##BC000246|RPAP1|26015|RNA polymerase II associated protein 1##BC143903|LTK|4058|leukocyte receptor tyrosine kinase##D16105|LTK|4058|leukocyte receptor tyrosine kinase##AK314006|LTK|4058|leukocyte receptor tyrosine kinase##BC045607|LTK|4058|leukocyte receptor tyrosine kinase##X60702|LTK|4058|leukocyte receptor tyrosine kinase##AK296892|LTK|4058|leukocyte receptor tyrosine kinase##NM_001135685|LTK|4058|leukocyte receptor tyrosine kinase##NM_002344|LTK|4058|leukocyte receptor tyrosine kinase##NM_206961|LTK|4058|leukocyte receptor tyrosine kinase##NM_006293|TYRO3|7301|TYRO3 protein tyrosine kinase##D17517|TYRO3|7301|TYRO3 protein tyrosine kinase##BC051756|TYRO3|7301|TYRO3 protein tyrosine kinase##BC034960|TYRO3|7301|TYRO3 protein tyrosine kinase##BC049368|TYRO3|7301|TYRO3 protein tyrosine kinase##U05682|TYRO3|7301|TYRO3 protein tyrosine kinase##D50479|TYRO3|7301|TYRO3 protein tyrosine kinase##NM_001080541|MGA|23269|MAX gene associated##NM_001164273|MGA|23269|MAX gene associated##AK055203|MGA|23269|MAX gene associated	0.870771	CTCF.p2:2:0.676
chr3	148097695	148097818	reg1020623.p1	7.045	+	BC104848 BC104850 TSC_hg19_v1_chr3_+_147127864 AB464362	-969894	+	TSC_hg19_v1_chr3_+_147127156 NM_003412	-970585	+	NM_001243256 NM_032153	-973161	-	NM_000685 NM_004835 NM_009585 NM_031850 TSC_hg19_v1_chr3_+_148415688 AK291541 BC068494 BC022447 M87290 S77410 X65699	317931	+	NM_032049	350210	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	447842	+	BC104848|ZIC1|7545|Zic family member 1##BC104850|ZIC1|7545|Zic family member 1##NM_003412|ZIC1|7545|Zic family member 1##NM_001243256|ZIC4|84107|Zic family member 4##NM_032153|ZIC4|84107|Zic family member 4##NM_000685|AGTR1|185|angiotensin II receptor, type 1##NM_004835|AGTR1|185|angiotensin II receptor, type 1##NM_009585|AGTR1|185|angiotensin II receptor, type 1##NM_031850|AGTR1|185|angiotensin II receptor, type 1##AK291541|AGTR1|185|angiotensin II receptor, type 1##BC068494|AGTR1|185|angiotensin II receptor, type 1##BC022447|AGTR1|185|angiotensin II receptor, type 1##M87290|AGTR1|185|angiotensin II receptor, type 1##S77410|AGTR1|185|angiotensin II receptor, type 1##X65699|AGTR1|185|angiotensin II receptor, type 1##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)	0.608406	CTCF.p2:-1:0.608
chr3	45948434	45948554	reg1019689.p2	7.045	+	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	-20439	+	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	-64899	-	TSC_hg19_v1_chr3_-_45838112 AF125107	-110346	-	NM_006564 Y13248	36478	+	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	88827	-	AB189434 AB189435 NM_001024644 NM_005283	120484	-	NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1	0.010816	
chr15	75560267	75560405	reg1021959.p1	7.044	+	AF263742 NM_001164404	-9438	+	TSC_hg19_v1_chr15_+_75494242 AF495726 BC011379 AK125604	-66093	+	BC110367 TSC_hg19_v1_chr15_+_75494233	-66103	+	AF263742 NM_001145224	14842	+	NM_017828 AK225716 BC033744 AK000459 AK293708 AK057145 AK124968 AK314740 BC069195 BC068998 AL136872	68058	+	NM_024608 AK026055	79033	+	AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001164404|GOLGA6C|653641|golgin A6 family, member C##AF495726|C15orf39|56905|chromosome 15 open reading frame 39##BC011379|C15orf39|56905|chromosome 15 open reading frame 39##AK125604|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001145224|GOLGA6D|653643|golgin A6 family, member D##NM_017828|COMMD4|54939|COMM domain containing 4##AK225716|COMMD4|54939|COMM domain containing 4##BC033744|COMMD4|54939|COMM domain containing 4##AK000459|COMMD4|54939|COMM domain containing 4##AK293708|COMMD4|54939|COMM domain containing 4##AK057145|COMMD4|54939|COMM domain containing 4##AK314740|COMMD4|54939|COMM domain containing 4##BC069195|COMMD4|54939|COMM domain containing 4##BC068998|COMMD4|54939|COMM domain containing 4##AL136872|COMMD4|54939|COMM domain containing 4##NM_024608|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)##AK026055|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)	0.835639	CTCF.p2:-15:0.836
chr18	37151621	37151708	reg1018504.p1	7.044	+	TSC_hg19_v1_chr18_-_36915657 D28405	-236008	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	-2005665	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	-2005968	-	TSC_hg19_v1_chr18_-_37380279 AK090603	228604	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	2383535	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	2383569	+	NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##AK090603|LOC647946|647946|uncharacterized LOC647946##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3	0.991859	CTCF.p2:-9:0.992
chr9	10366331	10366449	reg1018852.p1	7.044	+	TSC_hg19_v1_chr9_+_8858136 AK094342	-1508257	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-1632471	-	TSC_hg19_v1_chr9_+_8713275 AY779046	-1653098	+	BC028038 NM_002839	246332	-	NM_000550 X51420 BC052608	2327035	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	2408626	+	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##AY779046|RPL18A|6142|ribosomal protein L18a##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150	0.76443	CTCF.p2:-15:0.764
chrX	41340650	41340779	reg1020645.p2	7.044	+	AJ278865 AF254868 NM_022567	-34015	+	AK304661 TSC_hg19_v1_chrX_+_41193866 AK127902	-146849	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	-147257	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	207553	+	BC070180 NM_080817 AK122626 AK313702 AL832460	242706	+	AB208859 AB590064 HQ258518 AY705392 AF035582 BC117311 BC143454 BC143456 AF032119 NM_001126054 NM_001126055 NM_003688 AK313399	441611	-	AJ278865|NYX|60506|nyctalopin##AF254868|NYX|60506|nyctalopin##NM_022567|NYX|60506|nyctalopin##AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82##AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)	0.997791	CTCF.p2:-3:0.998
chr12	120877553	120877702	reg1019901.p1	7.043	+	TSC_hg19_v1_chr12_+_120875920 AK312009 NM_004373 BC107861 BC070186 BC007723 DQ893099 DQ896371	-1717	+	AB463899 AB012851 NM_002442 TSC_hg19_v1_chr12_-_120806968	-70691	-	AB464016 EU832774 GQ129318 AK311830 BC005386 BC013384 BC106725 BC106726 M21054 NM_000928	-112054	-	U75688 DQ893091 DQ896363 AF161481 AK312006 BC055313 BC002638 NM_016399	6562	-	TSC_hg19_v1_chr12_+_120884261 NM_176818 AK094319	6593	+	BC047778 BC064523 TSC_hg19_v1_chr12_+_120884274 BC034962 BC107145 BC107146	6657	+	AK312009|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##NM_004373|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC107861|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC070186|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC007723|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ893099|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ896371|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##AB012851|MSI1|4440|musashi homolog 1 (Drosophila)##NM_002442|MSI1|4440|musashi homolog 1 (Drosophila)##EU832774|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##GQ129318|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##AK311830|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC005386|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC013384|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106725|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106726|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##M21054|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##NM_000928|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##U75688|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ893091|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ896363|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AF161481|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AK312006|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC055313|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC002638|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##NM_016399|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##NM_176818|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##AK094319|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC047778|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC064523|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC034962|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC107145|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC107146|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)	0.99866	CTCF.p2:19:0.999
chr14	91830756	91830880	reg1017702.p2	7.043	+	BC098567 NM_003485	-110624	-	BC128536 NM_001177676	-119967	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-249791	+	TSC_hg19_v1_chr14_-_91884159 AF070587	53330	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	53357	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	145682	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.0	
chr1	70166603	70166713	reg1022669.p1	7.043	+	TSC_hg19_v1_chr1_+_70034033 AF498274	-132578	+	AK294206 TSC_hg19_v1_chr1_+_70033988	-132687	+	TSC_hg19_v1_chr1_+_70032819 BC080568	-133820	+	AF434715 NM_020794 BC128989 CR749629	59224	+	BC003407 CU678999 TSC_hg19_v1_chr1_-_70671236 BC008586	504552	-	TSC_hg19_v1_chr1_-_70671263 AK022951 NM_017768	504653	-	AF498274|LRRC7|57554|leucine rich repeat containing 7##AF434715|LRRC7|57554|leucine rich repeat containing 7##NM_020794|LRRC7|57554|leucine rich repeat containing 7##BC128989|LRRC7|57554|leucine rich repeat containing 7##CR749629|LRRC7|57554|leucine rich repeat containing 7##BC003407|LRRC40|55631|leucine rich repeat containing 40##BC008586|LRRC40|55631|leucine rich repeat containing 40##AK022951|LRRC40|55631|leucine rich repeat containing 40##NM_017768|LRRC40|55631|leucine rich repeat containing 40	0.658219	CTCF.p2:0:0.658
chrX	16454866	16454959	reg1018559.p1	7.043	+	NM_005314	-313489	+	TSC_hg19_v1_chrX_-_15873104 NM_003916	-581809	-	AK130075 TSC_hg19_v1_chrX_-_15872938	-581974	-	L13220 NM_004057 X65869 BC112174	213385	+	AK125332 NM_001144002	275427	-	TSC_hg19_v1_chrX_-_16730802 NM_175859 BC034986 AK125348 AF226667 AK024070 AK023549 NM_019857	275951	-	NM_005314|GRPR|2925|gastrin-releasing peptide receptor##NM_003916|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##L13220|S100G|795|S100 calcium binding protein G##NM_004057|S100G|795|S100 calcium binding protein G##X65869|S100G|795|S100 calcium binding protein G##BC112174|S100G|795|S100 calcium binding protein G##AK125332|CTPS2|56474|CTP synthase II##NM_001144002|CTPS2|56474|CTP synthase II##NM_175859|CTPS2|56474|CTP synthase II##BC034986|CTPS2|56474|CTP synthase II##AK125348|CTPS2|56474|CTP synthase II##AF226667|CTPS2|56474|CTP synthase II##AK024070|CTPS2|56474|CTP synthase II##AK023549|CTPS2|56474|CTP synthase II##NM_019857|CTPS2|56474|CTP synthase II	0.99586	CTCF.p2:-1:0.996
chr1	13749149	13749283	reg1023476.p1	7.042	+	NM_001100114	-6415	+	NM_001099852	-12310	+	NM_001099851 BC144662 BC146858	-33127	+	BC016048 NM_001010847	90983	-	NM_006474 NM_198389 BC014668 BC022812 TSC_hg19_v1_chr1_+_13910326 AY194238 AK075327 AK075345 AK312607 AF390106 AF030428 AJ225022 AB127958	161173	+	NM_001006624 NM_001006625	162750	+	NM_001100114|PRAMEF21|391001|PRAME family member 21##NM_001099852|PRAMEF20|645425|PRAME family member 20##NM_001099851|PRAMEF17|391004|PRAME family member 17##BC144662|PRAMEF17|391004|PRAME family member 17##BC146858|PRAMEF17|391004|PRAME family member 17##BC016048|LRRC38|126755|leucine rich repeat containing 38##NM_001010847|LRRC38|126755|leucine rich repeat containing 38##NM_006474|PDPN|10630|podoplanin##NM_198389|PDPN|10630|podoplanin##BC014668|PDPN|10630|podoplanin##BC022812|PDPN|10630|podoplanin##AY194238|PDPN|10630|podoplanin##AK075327|PDPN|10630|podoplanin##AK075345|PDPN|10630|podoplanin##AK312607|PDPN|10630|podoplanin##AF390106|PDPN|10630|podoplanin##AF030428|PDPN|10630|podoplanin##AJ225022|PDPN|10630|podoplanin##AB127958|PDPN|10630|podoplanin##NM_001006624|PDPN|10630|podoplanin##NM_001006625|PDPN|10630|podoplanin	1.163855	CTCF.p2:13:0.999
chr15	75584543	75584680	reg1022303.p1	7.042	+	AF263742 NM_001145224	-9433	+	AF263742 NM_001164404	-33713	+	TSC_hg19_v1_chr15_+_75494242 AF495726 BC011379 AK125604	-90368	+	NM_017828 AK225716 BC033744 AK000459 AK293708 AK057145 AK124968 AK314740 BC069195 BC068998 AL136872	43783	+	NM_024608 AK026055	54758	+	AB209141 TSC_hg19_v1_chr15_-_75660874	76250	-	AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001145224|GOLGA6D|653643|golgin A6 family, member D##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001164404|GOLGA6C|653641|golgin A6 family, member C##AF495726|C15orf39|56905|chromosome 15 open reading frame 39##BC011379|C15orf39|56905|chromosome 15 open reading frame 39##AK125604|C15orf39|56905|chromosome 15 open reading frame 39##NM_017828|COMMD4|54939|COMM domain containing 4##AK225716|COMMD4|54939|COMM domain containing 4##BC033744|COMMD4|54939|COMM domain containing 4##AK000459|COMMD4|54939|COMM domain containing 4##AK293708|COMMD4|54939|COMM domain containing 4##AK057145|COMMD4|54939|COMM domain containing 4##AK314740|COMMD4|54939|COMM domain containing 4##BC069195|COMMD4|54939|COMM domain containing 4##BC068998|COMMD4|54939|COMM domain containing 4##AL136872|COMMD4|54939|COMM domain containing 4##NM_024608|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)##AK026055|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)##AB209141|MAN2C1|4123|mannosidase, alpha, class 2C, member 1	0.835639	CTCF.p2:-15:0.836
chr18	53051896	53052035	reg1023563.p1	7.042	+	M74718 FR748220 FR748221 AK300038 NM_001243234 NM_001243235	-62963	-	FR748222 NM_001243236	-82183	-	AF273051 TSC_hg19_v1_chr18_-_52626693 BC029508 NM_025214	-425278	-	FR748209 M74720 AB209741 TSC_hg19_v1_chr18_-_53068920 AK300636	16873	-	FR748208 TSC_hg19_v1_chr18_-_53068947	16979	-	AK095041 NM_001243232	19260	-	M74718|TCF4|6925|transcription factor 4##FR748220|TCF4|6925|transcription factor 4##FR748221|TCF4|6925|transcription factor 4##AK300038|TCF4|6925|transcription factor 4##NM_001243234|TCF4|6925|transcription factor 4##NM_001243235|TCF4|6925|transcription factor 4##FR748222|TCF4|6925|transcription factor 4##NM_001243236|TCF4|6925|transcription factor 4##AF273051|CCDC68|80323|coiled-coil domain containing 68##BC029508|CCDC68|80323|coiled-coil domain containing 68##NM_025214|CCDC68|80323|coiled-coil domain containing 68##FR748209|TCF4|6925|transcription factor 4##AB209741|TCF4|6925|transcription factor 4##AK300636|TCF4|6925|transcription factor 4##AK095041|TCF4|6925|transcription factor 4##NM_001243232|TCF4|6925|transcription factor 4	0.998151	CTCF.p2:4:0.998
chr19	12943493	12943669	reg1017371.p1	7.042	+	AY028917 NM_001080997	-2375	-	TSC_hg19_v1_chr19_+_12917432 NM_006397 BC011748 AY363912 Z97029 CR456841	-26133	+	TSC_hg19_v1_chr19_+_12917397 AK315327	-26184	+	TSC_hg19_v1_chr19_-_12945394 AB593122	1811	-	TSC_hg19_v1_chr19_-_12946243 BC005063 NM_031429 AK093672 AX748256	2660	-	NM_014975 TSC_hg19_v1_chr19_+_12949305 AB023190 AK297553 AB384551	5740	+	AY028917|RTBDN|83546|retbindin##NM_001080997|RTBDN|83546|retbindin##NM_006397|RNASEH2A|10535|ribonuclease H2, subunit A##BC011748|RNASEH2A|10535|ribonuclease H2, subunit A##AY363912|RNASEH2A|10535|ribonuclease H2, subunit A##Z97029|RNASEH2A|10535|ribonuclease H2, subunit A##CR456841|RNASEH2A|10535|ribonuclease H2, subunit A##AK315327|RNASEH2A|10535|ribonuclease H2, subunit A##AB593122|RTBDN|83546|retbindin##BC005063|RTBDN|83546|retbindin##NM_031429|RTBDN|83546|retbindin##AK093672|RTBDN|83546|retbindin##NM_014975|MAST1|22983|microtubule associated serine/threonine kinase 1##AB023190|MAST1|22983|microtubule associated serine/threonine kinase 1##AK297553|MAST1|22983|microtubule associated serine/threonine kinase 1	0.975734	CTCF.p2:47:0.976
chr2	179387774	179387905	reg1019808.p1	7.042	+	TSC_hg19_v1_chr2_+_179345280 AF286162 BC044567 EU832321 EU832406	-42409	+	TSC_hg19_v1_chr2_+_179345234 AK074209	-42607	+	AK314459 NM_019091 TSC_hg19_v1_chr2_+_179345209	-42636	+	TSC_hg19_v1_chr2_+_179387947 AK093733	121	+	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	271862	-	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	284264	-	AF286162|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##BC044567|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##EU832321|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##EU832406|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##AK074209|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##AK314459|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##NM_019091|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##AK093733|LOC100506866|100506866|uncharacterized LOC100506866##X98114|TTN|7273|titin##X98115|TTN|7273|titin##X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin	0.114856	
chr8	72248447	72248564	reg1019130.p2	7.042	+	AY534247 BC111381 NM_001011720 BC151845 BC137104 BC137105	-666865	+	TSC_hg19_v1_chr8_-_71581419 BC000878 BC008505 NM_016027	-667056	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	-667121	-	AF467247 BC121798 BC121799 AJ000097 NM_172058 NM_172059 NM_172060	20344	-	AK127798 AK295897 TSC_hg19_v1_chr8_-_72274006	25480	-	TSC_hg19_v1_chr8_-_72274302 AK307379	25788	-	AY534247|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC111381|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##NM_001011720|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC151845|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137104|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137105|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC000878|LACTB2|51110|lactamase, beta 2##BC008505|LACTB2|51110|lactamase, beta 2##NM_016027|LACTB2|51110|lactamase, beta 2##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2##AF467247|EYA1|2138|eyes absent homolog 1 (Drosophila)##BC121798|EYA1|2138|eyes absent homolog 1 (Drosophila)##BC121799|EYA1|2138|eyes absent homolog 1 (Drosophila)##AJ000097|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172058|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172059|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172060|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)	0.0	
chr12	78514773	78514894	reg1019228.p1	7.041	+	NM_014903 AJ488201	-289701	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-1055544	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-1242050	-	AK094616 NM_001135805	742939	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	743642	+	TSC_hg19_v1_chr12_+_79258517 BX647240	743703	+	NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I##BX647240|SYT1|6857|synaptotagmin I	0.973264	CTCF.p2:12:0.973
chr14	54908175	54908289	reg1017510.p1	7.041	+	TSC_hg19_v1_chr14_-_54908095 BX248284 AY358635 AK074781 AK307074 AK311897 AF070654 AF104398 NM_005776 BC103741	-116	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	-44511	+	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	-484699	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	47453	-	TSC_hg19_v1_chr14_-_54955728 AB001106 BX647679 NM_004124	47523	-	AK315318 AK289478 TSC_hg19_v1_chr14_+_54976623 NM_006568 BC015063 U66469 CU677207 EU832831 GQ129438	68379	+	BX248284|CNIH|10175|cornichon homolog (Drosophila)##AY358635|CNIH|10175|cornichon homolog (Drosophila)##AK074781|CNIH|10175|cornichon homolog (Drosophila)##AK307074|CNIH|10175|cornichon homolog (Drosophila)##AK311897|CNIH|10175|cornichon homolog (Drosophila)##AF070654|CNIH|10175|cornichon homolog (Drosophila)##AF104398|CNIH|10175|cornichon homolog (Drosophila)##NM_005776|CNIH|10175|cornichon homolog (Drosophila)##BC103741|CNIH|10175|cornichon homolog (Drosophila)##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta##AB001106|GMFB|2764|glia maturation factor, beta##BX647679|GMFB|2764|glia maturation factor, beta##NM_004124|GMFB|2764|glia maturation factor, beta##AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1##AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1##NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1##BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1##U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1##EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1##GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1	0.965507	CTCF.p2:-11:0.966
chr17	55481539	55481684	reg1020083.p1	7.041	+	AK093888 AX748353 NM_170721	-147238	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-147638	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-318468	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	445793	-	AK000746 NM_017949	499138	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	551065	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.071968	
chrX	135245126	135245241	reg1019969.p1	7.041	+	NM_001159700 AK304680	-14411	+	TSC_hg19_v1_chrX_+_135229691 NM_001159702 NM_001159703 NM_001449 BC010998 AK297124 AK091702 AK300966 AX747139 AK094024	-15550	+	TSC_hg19_v1_chrX_+_135067781 AK296444	-177332	+	AK122708 NM_001159704	6271	+	NM_001167819	6612	+	NM_001159701 AK301642 NM_001159699 TSC_hg19_v1_chrX_+_135279205 AK299381 AK299379 AK299450 BC088369 EU832162 EU832256	33907	+	NM_001159700|FHL1|2273|four and a half LIM domains 1##AK304680|FHL1|2273|four and a half LIM domains 1##NM_001159702|FHL1|2273|four and a half LIM domains 1##NM_001159703|FHL1|2273|four and a half LIM domains 1##NM_001449|FHL1|2273|four and a half LIM domains 1##BC010998|FHL1|2273|four and a half LIM domains 1##AK297124|FHL1|2273|four and a half LIM domains 1##AK091702|FHL1|2273|four and a half LIM domains 1##AK300966|FHL1|2273|four and a half LIM domains 1##AK094024|FHL1|2273|four and a half LIM domains 1##AK296444|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##AK122708|FHL1|2273|four and a half LIM domains 1##NM_001159704|FHL1|2273|four and a half LIM domains 1##NM_001167819|FHL1|2273|four and a half LIM domains 1##NM_001159701|FHL1|2273|four and a half LIM domains 1##AK301642|FHL1|2273|four and a half LIM domains 1##NM_001159699|FHL1|2273|four and a half LIM domains 1##AK299381|FHL1|2273|four and a half LIM domains 1##AK299379|FHL1|2273|four and a half LIM domains 1##AK299450|FHL1|2273|four and a half LIM domains 1##BC088369|FHL1|2273|four and a half LIM domains 1##EU832162|FHL1|2273|four and a half LIM domains 1##EU832256|FHL1|2273|four and a half LIM domains 1	1.042656	CTCF.p2:-1:0.720	CTCF.p2:-24:0.323
chr13	110443773	110443924	reg1022343.p1	7.040	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	-4940	-	AB290159 AK127806 NM_001198950	-1162279	+	AB020672 BC146791 NM_015011 AL834447	-1195334	+	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	358887	-	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	515661	-	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	515773	+	NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2	0.987734	CTCF.p2:19:0.988
chr20	48702105	48702251	reg1018562.p1	7.040	+	TSC_hg19_v1_chr20_+_48599515 NM_005985 AK313228 BC012910 AF125377 DQ891599 DQ894793 AB464226 AF131208 CU680444	-102625	+	BX640603 TSC_hg19_v1_chr20_+_48552935 BC066919 AF265215 AK301731 BC013695 AB587558 BT006795	-149235	+	TSC_hg19_v1_chr20_+_48552933 AK315638	-149247	+	BT007382 CU674232 HQ448675 TSC_hg19_v1_chr20_-_48729684 BC000468 BX647511 BX648147 NM_001032288	27512	-	TSC_hg19_v1_chr20_-_48732483 AK314754 NM_022442 BC005215 NM_021988 NM_199144	30310	-	TSC_hg19_v1_chr20_-_48770209 BC140089 BC143091 AB587452	68012	-	NM_005985|SNAI1|6615|snail homolog 1 (Drosophila)##AK313228|SNAI1|6615|snail homolog 1 (Drosophila)##BC012910|SNAI1|6615|snail homolog 1 (Drosophila)##AF125377|SNAI1|6615|snail homolog 1 (Drosophila)##DQ891599|SNAI1|6615|snail homolog 1 (Drosophila)##DQ894793|SNAI1|6615|snail homolog 1 (Drosophila)##AF131208|SNAI1|6615|snail homolog 1 (Drosophila)##BX640603|RNF114|55905|ring finger protein 114##BC066919|RNF114|55905|ring finger protein 114##AF265215|RNF114|55905|ring finger protein 114##AK301731|RNF114|55905|ring finger protein 114##BC013695|RNF114|55905|ring finger protein 114##BT006795|RNF114|55905|ring finger protein 114##AK315638|RNF114|55905|ring finger protein 114##BT007382|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##HQ448675|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BC000468|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BX647511|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BX648147|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_001032288|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##AK314754|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_022442|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BC005215|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_021988|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##NM_199144|UBE2V1|7335|ubiquitin-conjugating enzyme E2 variant 1##BC140089|TMEM189|387521|transmembrane protein 189##BC143091|TMEM189|387521|transmembrane protein 189	0.739644	CTCF.p2:0:0.740
chr21	30312641	30312772	reg1020329.p2	7.040	+	TSC_hg19_v1_chr21_-_30257688 AB590951 BC011554 AK314100 AK225515 AF139682 NM_013240 NM_182749	-55043	-	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	-1973267	-	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	-2094994	-	BC007525 AB384515 TSC_hg19_v1_chr21_-_30365185 AF161350 AB018257 BC150284 AB621822 BC029371 BC140790 AK001915 BC031633 NM_015565	52487	-	CU676110 TSC_hg19_v1_chr21_-_30391645 AF212232 BC012546 Y19009 BC017912 AK000056 AL355727 NM_016940 AK223357	78941	-	TSC_hg19_v1_chr21_+_30396981 NM_001001992 NM_001032410 NM_006447 AK025104 AK025989 AK294284 BC030777 BC010375 AK222681 AF126736 AY333928 AK222884 AK300771	84285	+	BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC007525|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF161350|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AB018257|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC150284|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC029371|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC140790|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AK001915|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC031633|LTN1|26046|listerin E3 ubiquitin protein ligase 1##NM_015565|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF212232|RWDD2B|10069|RWD domain containing 2B##BC012546|RWDD2B|10069|RWD domain containing 2B##Y19009|RWDD2B|10069|RWD domain containing 2B##BC017912|RWDD2B|10069|RWD domain containing 2B##AK000056|RWDD2B|10069|RWD domain containing 2B##AL355727|RWDD2B|10069|RWD domain containing 2B##NM_016940|RWDD2B|10069|RWD domain containing 2B##AK223357|RWDD2B|10069|RWD domain containing 2B##NM_001001992|USP16|10600|ubiquitin specific peptidase 16##NM_001032410|USP16|10600|ubiquitin specific peptidase 16##NM_006447|USP16|10600|ubiquitin specific peptidase 16##AK025104|USP16|10600|ubiquitin specific peptidase 16##AK025989|USP16|10600|ubiquitin specific peptidase 16##AK294284|USP16|10600|ubiquitin specific peptidase 16##BC030777|USP16|10600|ubiquitin specific peptidase 16##BC010375|USP16|10600|ubiquitin specific peptidase 16##AK222681|USP16|10600|ubiquitin specific peptidase 16##AF126736|USP16|10600|ubiquitin specific peptidase 16##AY333928|USP16|10600|ubiquitin specific peptidase 16##AK222884|USP16|10600|ubiquitin specific peptidase 16##AK300771|USP16|10600|ubiquitin specific peptidase 16	0.302207	CTCF.p2:0:0.302
chr5	93949428	93949545	reg1019140.p2	7.040	+	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	-502166	-	CU688688 EU446850 BC029532 AB527965 AK098546 NM_153216	-872234	-	AK309742 TSC_hg19_v1_chr5_-_92957232	-992275	-	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	4771	-	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	4887	+	AK025997 TSC_hg19_v1_chr5_-_94224607	275120	-	AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##EU446850|POU5F2|134187|POU domain class 5, transcription factor 2##BC029532|POU5F2|134187|POU domain class 5, transcription factor 2##AK098546|POU5F2|134187|POU domain class 5, transcription factor 2##NM_153216|POU5F2|134187|POU domain class 5, transcription factor 2##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1	0.909435	CTCF.p2:-12:0.909
chrX	62269833	62269955	reg1022003.p1	7.040	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-4332935	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-4651434	+	NM_007157	-4651626	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	301305	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	378373	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	510973	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.946132	CTCF.p2:-6:0.946
chr12	91720311	91720453	reg1021862.p1	7.039	+	NM_001920	-143577	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-143802	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-147071	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	819261	-	AJ845165 AJ845166 NM_001025233	1097352	+	AJ845168 NM_001025232	1101541	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.124184	
chr13	39156395	39156502	reg1018180.p1	7.039	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	-232399	+	NM_016617 TSC_hg19_v1_chr13_+_38923946	-232497	+	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	-712550	-	NM_207361	104724	+	DQ891676 EU176604 AK313632 BC025760 AK304159 NM_001144033 NM_145286	408478	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	455753	-	AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2##DQ891676|STOML3|161003|stomatin (EPB72)-like 3##EU176604|STOML3|161003|stomatin (EPB72)-like 3##AK313632|STOML3|161003|stomatin (EPB72)-like 3##BC025760|STOML3|161003|stomatin (EPB72)-like 3##AK304159|STOML3|161003|stomatin (EPB72)-like 3##NM_001144033|STOML3|161003|stomatin (EPB72)-like 3##NM_145286|STOML3|161003|stomatin (EPB72)-like 3##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1	0.991336	CTCF.p2:21:0.991
chr11	63275626	63275739	reg1016194.p1	7.038	+	AF244975 AF244977 NM_001142537 NM_001142538	-224	+	AF244974 AF244976 TSC_hg19_v1_chr11_+_63273565 BC028222	-2102	+	AK313851 NM_001142535 NM_001142536 NM_033101 TSC_hg19_v1_chr11_+_63273527	-2157	+	NM_004585 AF092922 AK293357 AK312110 BC009678 AF060228 AB030815 AK123723	28612	+	AK000563 NM_017878	55172	-	AB439591 AB528317 DQ892568 DQ895783 AB030814 AF317086 AX775893 BC103807 BC103808 TSC_hg19_v1_chr11_-_63381778	105949	-	AF244975|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AF244977|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142537|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142538|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AF244974|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AF244976|LGALS12|85329|lectin, galactoside-binding, soluble, 12##BC028222|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AK313851|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142535|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142536|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_033101|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_004585|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF092922|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AK293357|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AK312110|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##BC009678|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF060228|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AB030815|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AK000563|HRASLS2|54979|HRAS-like suppressor 2##NM_017878|HRASLS2|54979|HRAS-like suppressor 2##AB439591|PLA2G16|11145|phospholipase A2, group XVI##DQ892568|PLA2G16|11145|phospholipase A2, group XVI##DQ895783|PLA2G16|11145|phospholipase A2, group XVI##AB030814|PLA2G16|11145|phospholipase A2, group XVI##AF317086|PLA2G16|11145|phospholipase A2, group XVI##BC103807|PLA2G16|11145|phospholipase A2, group XVI##BC103808|PLA2G16|11145|phospholipase A2, group XVI	0.841032	CTCF.p2:19:0.841
chr20	1881104	1881218	reg1019457.p1	7.038	+	TSC_hg19_v1_chr20_+_1876034 AK312521 BC033092 Y10375 AB385585 D86043 DQ891651	-5112	+	BC038510 NM_001040023 TSC_hg19_v1_chr20_+_1875923	-5287	+	TSC_hg19_v1_chr20_+_1875554 BC026692	-5565	+	AK289618 NM_001190892	92290	-	NM_001190900	93232	-	AK316076 BC026334 AK295512 TSC_hg19_v1_chr20_-_1974732 AK308747 NM_001190898 NM_001190899 NM_024411	93654	-	AK312521|SIRPA|140885|signal-regulatory protein alpha##BC033092|SIRPA|140885|signal-regulatory protein alpha##Y10375|SIRPA|140885|signal-regulatory protein alpha##D86043|SIRPA|140885|signal-regulatory protein alpha##DQ891651|SIRPA|140885|signal-regulatory protein alpha##BC038510|SIRPA|140885|signal-regulatory protein alpha##NM_001040023|SIRPA|140885|signal-regulatory protein alpha##BC026692|SIRPA|140885|signal-regulatory protein alpha##AK289618|PDYN|5173|prodynorphin##NM_001190892|PDYN|5173|prodynorphin##NM_001190900|PDYN|5173|prodynorphin##AK316076|PDYN|5173|prodynorphin##BC026334|PDYN|5173|prodynorphin##NM_001190898|PDYN|5173|prodynorphin##NM_001190899|PDYN|5173|prodynorphin##NM_024411|PDYN|5173|prodynorphin	0.09329	
chr6	147606343	147606451	reg1020624.p1	7.038	+	TSC_hg19_v1_chr6_+_147527118 AK128121	-79287	+	NM_001127715 NM_139244 AL834152 BC107737 BC113382 BC113408	-80841	+	TSC_hg19_v1_chr6_+_147524880 BC043645	-81523	+	TSC_hg19_v1_chr6_+_147829825 NM_001030060	223422	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	1057366	+	TSC_hg19_v1_chr6_+_148663973 AB018333	1057593	+	AK128121|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001127715|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_139244|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AL834152|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC107737|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113382|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113408|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC043645|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001030060|SAMD5|389432|sterile alpha motif domain containing 5##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1	0.13914	
chr6	85725245	85725368	reg1017773.p1	7.038	+	HQ258462 NM_001080508 BC157841 BC132715	-251381	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	-252136	-	TSC_hg19_v1_chr6_-_85472330 AJ010278	-252981	-	NM_001204813 NM_002526 TSC_hg19_v1_chr6_+_86159433	434066	+	TSC_hg19_v1_chr6_+_86159827 AK314661 AX772810 X55740 BC015940 AK075008 BC065937 DQ186653	434509	+	BC046520 AY044865 CU686683 TSC_hg19_v1_chr6_-_86303440 BC095419	578087	-	HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18##AJ010278|TBX18|9096|T-box 18##NM_001204813|NT5E|4907|5'-nucleotidase, ecto (CD73)##NM_002526|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK314661|NT5E|4907|5'-nucleotidase, ecto (CD73)##X55740|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC015940|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK075008|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC065937|NT5E|4907|5'-nucleotidase, ecto (CD73)##DQ186653|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC046520|SNX14|57231|sorting nexin 14##AY044865|SNX14|57231|sorting nexin 14##BC095419|SNX14|57231|sorting nexin 14	0.673398	CTCF.p2:13:0.673
chrX	17963371	17963461	reg1018171.p1	7.038	+	AK056214 AK298873 AK314631 NM_001172732 NM_001172739 NM_001172743 NM_021785	-84011	-	TSC_hg19_v1_chrX_+_17755572 BC026159 NM_001037535 NM_001037536 NM_001037540 NM_006746 AK313993 BC009193 AF160728	-207821	+	AY456992 NM_001136024	-310004	+	DQ892470 DQ895683 BC096745 BC037301 AK128155 NM_001184767 NM_153346	275532	-	Y18004 BC051913 TSC_hg19_v1_chrX_-_18372809 BC064617 AK303064 AK315116 BC040497 NM_006089	409394	-	BC010966 TSC_hg19_v1_chrX_+_18443727 NM_003159 AK307444 AY217744 Y15057	480313	+	AK056214|RAI2|10742|retinoic acid induced 2##AK298873|RAI2|10742|retinoic acid induced 2##AK314631|RAI2|10742|retinoic acid induced 2##NM_001172732|RAI2|10742|retinoic acid induced 2##NM_001172739|RAI2|10742|retinoic acid induced 2##NM_001172743|RAI2|10742|retinoic acid induced 2##NM_021785|RAI2|10742|retinoic acid induced 2##BC026159|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037535|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037536|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037540|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_006746|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AK313993|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##BC009193|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AF160728|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##DQ892470|BEND2|139105|BEN domain containing 2##DQ895683|BEND2|139105|BEN domain containing 2##BC096745|BEND2|139105|BEN domain containing 2##BC037301|BEND2|139105|BEN domain containing 2##AK128155|BEND2|139105|BEN domain containing 2##NM_001184767|BEND2|139105|BEN domain containing 2##NM_153346|BEND2|139105|BEN domain containing 2##Y18004|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC051913|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC064617|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK303064|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK315116|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC040497|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##NM_006089|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC010966|CDKL5|6792|cyclin-dependent kinase-like 5##NM_003159|CDKL5|6792|cyclin-dependent kinase-like 5##AK307444|CDKL5|6792|cyclin-dependent kinase-like 5##AY217744|CDKL5|6792|cyclin-dependent kinase-like 5##Y15057|CDKL5|6792|cyclin-dependent kinase-like 5	0.053162	
chr16	25719442	25719566	reg1020457.p2	7.037	+	AF105378 NM_006040	-16158	+	TSC_hg19_v1_chr16_-_25269141 AK303472	-450299	-	BX648785 AK131342 NM_001012981 AK302399	-450645	-	NM_001145545 BC031257 AK311574	1358743	+	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	1495323	+	AK297166 NM_001145348	1495791	+	AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##BX648785|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK131342|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001012981|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK302399|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5	0.990906	CTCF.p2:-2:0.956
chr13	101195179	101195316	reg1022189.p1	7.036	+	AK091974 BC001077 BC004360 NM_033110	-9248	-	NM_000282 NM_001127692 NM_001178004 TSC_hg19_v1_chr13_+_100741349 AF385926 AK298318 AK225288 AK225299 AK296771 AK315503 BC000140 X14608	-453888	+	TSC_hg19_v1_chr13_+_100634271 AF104902 AF193855	-560960	+	TSC_hg19_v1_chr13_-_101241029 AK095850 NM_001195087	45780	-	AK299859 TSC_hg19_v1_chr13_-_101327050 BX648008 AK056409 AK290345 BX647956	131809	-	NM_001079669 NM_032813 TSC_hg19_v1_chr13_-_101327108	131862	-	AK091974|A2LD1|87769|AIG2-like domain 1##BC001077|A2LD1|87769|AIG2-like domain 1##BC004360|A2LD1|87769|AIG2-like domain 1##NM_033110|A2LD1|87769|AIG2-like domain 1##NM_000282|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##NM_001127692|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##NM_001178004|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AF385926|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK298318|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK225288|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK225299|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK296771|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK315503|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##BC000140|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##X14608|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AF104902|ZIC2|7546|Zic family member 2##AF193855|ZIC2|7546|Zic family member 2##AK095850|A2LD1|87769|AIG2-like domain 1##NM_001195087|A2LD1|87769|AIG2-like domain 1##AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##NM_001079669|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##NM_032813|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4	0.898381	CTCF.p2:17:0.398	CTCF.p2:18:0.501
chr4	52892256	52892392	reg1020583.p1	7.035	+	CR749811 NM_001024611	-8539	-	AK124346 NM_001040402 NM_015115 TSC_hg19_v1_chr4_+_52709318 BC053897 AK294896 BX537944 AK027051 D87466 BC041702 AM392554 AM392637 AM392729 AM393240	-183038	+	AK025164 NM_025087 BC137387 BC137388	-3904052	+	BT019433 CR456810 DQ893140 DQ896425 EU176433 U29586 TSC_hg19_v1_chr4_-_52904447 AK299765 BC020709 AK289892 U31116 NM_000232	12133	-	TSC_hg19_v1_chr4_+_52917480 AK304386 AK057468 BC025396 NM_145263 AK314799	25209	+	AK302438 NM_001134223	630433	-	CR749811|LRRC66|339977|leucine rich repeat containing 66##NM_001024611|LRRC66|339977|leucine rich repeat containing 66##AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK025164|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##NM_025087|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137387|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137388|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BT019433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR456810|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ893140|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ896425|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##EU176433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U29586|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK299765|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##BC020709|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK289892|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U31116|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##NM_000232|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK304386|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK057468|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BC025396|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##NM_145263|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK314799|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK302438|USP46|64854|ubiquitin specific peptidase 46##NM_001134223|USP46|64854|ubiquitin specific peptidase 46	0.999645	CTCF.p2:45:1.000
chr9	130217693	130217794	reg1020117.p1	7.035	+	BC009239 NM_001005374	-3210	+	NM_001005373 NM_001190723 TSC_hg19_v1_chr9_+_130213788 AK056203 NM_138361 AK226106 AY358830	-3959	+	BC059950 BC094831 BC050644 BC071921 L06505 AF037643 AB209471 AK026526 AK057602 BC105603 D28443 NM_000976	-4063	-	AB210016 BC067366 TSC_hg19_v1_chr9_-_130331266	113462	-	TSC_hg19_v1_chr9_-_130331353 BC110345 NM_022833 AF192911	113652	-	TSC_hg19_v1_chr9_-_130341311 AF151783 NM_001035534	123545	-	BC009239|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001005374|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001005373|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001190723|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AK056203|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_138361|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AK226106|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AY358830|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##BC059950|RPL12|6136|ribosomal protein L12##BC094831|RPL12|6136|ribosomal protein L12##BC050644|RPL12|6136|ribosomal protein L12##L06505|RPL12|6136|ribosomal protein L12##AB209471|RPL12|6136|ribosomal protein L12##AK026526|RPL12|6136|ribosomal protein L12##AK057602|RPL12|6136|ribosomal protein L12##BC105603|RPL12|6136|ribosomal protein L12##D28443|RPL12|6136|ribosomal protein L12##NM_000976|RPL12|6136|ribosomal protein L12##AB210016|FAM129B|64855|family with sequence similarity 129, member B##BC067366|FAM129B|64855|family with sequence similarity 129, member B##BC110345|FAM129B|64855|family with sequence similarity 129, member B##NM_022833|FAM129B|64855|family with sequence similarity 129, member B##AF192911|FAM129B|64855|family with sequence similarity 129, member B##AF151783|FAM129B|64855|family with sequence similarity 129, member B##NM_001035534|FAM129B|64855|family with sequence similarity 129, member B	0.822327	CTCF.p2:-9:0.822
chr11_gl000202_random	7415	7592	reg1021046.p1	7.034	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.009428	CTCF.p2:3:0.995
chr1	22349454	22349618	reg1020930.p1	7.034	+	BC005918 BC015103 D00306 NM_005747 BC007028 AK225620 AK308514 BC008383 CU675183 CU678941 DQ893182 DQ896490	-21379	+	NM_007352 AK092382 AK308518 AX747509 BC005216 M18692 AK315798 AK308510 M16630	-46057	+	TSC_hg19_v1_chr1_-_22263804 X62515 NM_005529 M85289	-85770	-	TSC_hg19_v1_chr1_+_22352003 AF161506 BC016053	2476	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	29634	+	TSC_hg19_v1_chr1_+_22379812 AL121737	30269	+	BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A##D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B##M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A##M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B##X62515|HSPG2|3339|heparan sulfate proteoglycan 2##NM_005529|HSPG2|3339|heparan sulfate proteoglycan 2##M85289|HSPG2|3339|heparan sulfate proteoglycan 2##AF161506|LINC00339|29092|long intergenic non-protein coding RNA 339##BC016053|LINC00339|29092|long intergenic non-protein coding RNA 339##NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)	0.0	
chr15	60964743	60964860	reg1019382.p1	7.034	+	U04899 U04898 NM_002943 NM_134260	-45116	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	-80122	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-193527	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	556623	-	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	556696	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	1387813	-	U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	0.399556	CTCF.p2:-10:0.400
chr17	56672918	56673071	reg1020800.p2	7.034	+	AK097440 BC022189 NM_001038704	-51287	-	AK301914 AK302146 NM_001198713	-54816	-	BC018056 U88870 AK295527 AK315396 TSC_hg19_v1_chr17_-_56609427 AF176379 AK308957 NM_080415 NM_080416	-63576	-	AK308299 BC040526 AK125896 BC045647 AL834143 NM_001201457 NM_031272 NM_198393	96401	-	TSC_hg19_v1_chr17_+_56769933 BC107753	96941	+	TSC_hg19_v1_chr17_+_56769962 AF029669 AK290487 BC073161 NM_002876 NM_058216 BC064578 BC093930 BC101485 BC143259 BC000667 AF029670 AB528656 BT007339 AK129738 AK303363	97007	+	AK097440|C17orf47|284083|chromosome 17 open reading frame 47##BC022189|C17orf47|284083|chromosome 17 open reading frame 47##NM_001038704|C17orf47|284083|chromosome 17 open reading frame 47##AK301914|SEPT4|5414|septin 4##AK302146|SEPT4|5414|septin 4##NM_001198713|SEPT4|5414|septin 4##BC018056|SEPT4|5414|septin 4##U88870|SEPT4|5414|septin 4##AK295527|SEPT4|5414|septin 4##AK315396|SEPT4|5414|septin 4##AF176379|SEPT4|5414|septin 4##AK308957|SEPT4|5414|septin 4##NM_080415|SEPT4|5414|septin 4##NM_080416|SEPT4|5414|septin 4##AK308299|TEX14|56155|testis expressed 14##BC040526|TEX14|56155|testis expressed 14##AK125896|TEX14|56155|testis expressed 14##BC045647|TEX14|56155|testis expressed 14##AL834143|TEX14|56155|testis expressed 14##NM_001201457|TEX14|56155|testis expressed 14##NM_031272|TEX14|56155|testis expressed 14##NM_198393|TEX14|56155|testis expressed 14##BC107753|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	0.029334	
chr3	160061069	160061207	reg1017863.p2	7.034	+	BC031660 TSC_hg19_v1_chr3_+_159943777	-117435	+	TSC_hg19_v1_chr3_+_159943306 NM_001168214	-117801	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	-354406	+	AB037795 NM_001190242	40360	-	BC101494 BC113669 TSC_hg19_v1_chr3_-_160117005 AK055904 BC030774	55855	-	AK303410 AK125342 NM_001190241 NM_020800	56178	-	BC031660|C3orf80|401097|chromosome 3 open reading frame 80##NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80##NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##BC101494|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##BC113669|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##AK055904|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##BC030774|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##AK303410|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##AK125342|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##NM_001190241|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##NM_020800|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	0.891025	CTCF.p2:0:0.891
chr12	5905762	5905890	reg1021099.p1	7.033	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	-302488	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	-364550	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	-752707	+	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	148648	-	AJ272204 NM_020373	149571	-	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	327933	-	BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor	0.0	
chr13	26084095	26084204	reg1019193.p2	7.033	+	AK302980 TSC_hg19_v1_chr13_+_26042965	-41184	+	TSC_hg19_v1_chr13_+_26042926 AK126031	-41220	+	TSC_hg19_v1_chr13_+_25946121 AK127263 NM_016529	-137997	+	BC132898 BC137092 AY358775 NM_001007538	541031	-	AL133621 TSC_hg19_v1_chr13_-_26789203	704986	-	TSC_hg19_v1_chr13_-_26795853 AY009109 NM_183044	711708	-	AK302980|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK126031|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK127263|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##NM_016529|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##BC132898|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##BC137092|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AY358775|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##NM_001007538|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AL133621|RNF6|6049|ring finger protein (C3H2C3 type) 6##AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6	0.99978	CTCF.p2:-9:1.000
chr8	91960618	91960741	reg1022020.p1	7.033	+	AF414126 TSC_hg19_v1_chr8_+_91803956 NM_022351 AK095533 BC068448 AY224210	-156734	+	TSC_hg19_v1_chr8_-_91657970 AY147881 NM_001008495 NM_001146273	-302664	-	AK300583 AK123958 AL834364 TSC_hg19_v1_chr8_-_91657856	-302881	-	TSC_hg19_v1_chr8_-_91997476 NM_001190972	36783	-	TSC_hg19_v1_chr8_-_92053091 AX775961 BC033892 AK313783 NM_018710	92443	-	TSC_hg19_v1_chr8_-_92082268 BC067244 BC105990 BC030623	121660	-	AF414126|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##NM_022351|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AK095533|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##BC068448|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AY224210|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AY147881|TMEM64|169200|transmembrane protein 64##NM_001008495|TMEM64|169200|transmembrane protein 64##NM_001146273|TMEM64|169200|transmembrane protein 64##AK300583|TMEM64|169200|transmembrane protein 64##AK123958|TMEM64|169200|transmembrane protein 64##AL834364|TMEM64|169200|transmembrane protein 64##NM_001190972|LOC100127983|100127983|uncharacterized LOC100127983##AX775961|TMEM55A|55529|transmembrane protein 55A##BC033892|TMEM55A|55529|transmembrane protein 55A##AK313783|TMEM55A|55529|transmembrane protein 55A##NM_018710|TMEM55A|55529|transmembrane protein 55A	0.999902	CTCF.p2:13:1.000
chr12	92537919	92538043	reg1019355.p2	7.032	+	NM_001920	-961176	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-961401	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-964670	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	1662	-	AJ845165 AJ845166 NM_001025233	279753	+	AJ845168 NM_001025232	283942	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.770019	CTCF.p2:0:0.770
chr16	89002567	89002678	reg1019201.p1	7.032	+	AB528852 EU190484 BC130001 BC130002 NM_001080487	-69581	-	TSC_hg19_v1_chr16_+_88923536 NM_016209 AF089106 AX771012 AK311885 BC105809 AK126779 AF161524 AK310805 AX771013 BC018024 AX771014 BC011369	-79099	+	AK294390 TSC_hg19_v1_chr16_-_88923352 AK312655 BC056151 BC050684 NM_000512 BC018027	-79252	-	AB010420 NM_175931	4984	-	AB527670 EU446890 BC047019 AK314766 AB010419 BC062624 NM_005187 TSC_hg19_v1_chr16_-_89043569	40781	-	TSC_hg19_v1_chr16_-_89119364 AK055272	116747	-	EU190484|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130001|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130002|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001080487|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_016209|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF089106|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771012|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK311885|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC105809|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK126779|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF161524|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK310805|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771013|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC018024|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771014|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC011369|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK294390|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK312655|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC056151|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC050684|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##NM_000512|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC018027|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##EU446890|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC047019|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AK314766|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010419|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC062624|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_005187|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3	0.471789	CTCF.p2:-17:0.472
chr2	64555168	64555308	reg1021089.p1	7.032	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-183714	-	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	-308733	-	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	-308976	-	TSC_hg19_v1_chr2_+_64681295 NM_014181	126062	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	126410	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	196246	+	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin	0.960382	CTCF.p2:21:0.960
chr7	33756369	33756479	reg1017287.p1	7.032	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-587343	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-607447	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-654102	-	AK289963 NM_133468 AK096150 BC060868	188718	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	941495	+	DQ287932 NM_015283	1321228	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	0.995691	CTCF.p2:-21:0.996
chr1	54776790	54776904	reg1020752.p1	7.031	+	TSC_hg19_v1_chr1_+_54665866 AF151069 AF325707 AY421759 BC000041 CU674006	-110957	+	TSC_hg19_v1_chr1_+_54665855 AK026171	-110994	+	AK024572 NM_016491 TSC_hg19_v1_chr1_+_54665839	-111005	+	CU688156 AK289474 BC003605 BC127866 BC066365 TSC_hg19_v1_chr1_-_54871828 AF500116	94941	-	NM_018070 NM_145716 TSC_hg19_v1_chr1_-_54872066	95175	-	TSC_hg19_v1_chr1_-_54872087 NM_001009955	95237	-	AF151069|MRPL37|51253|mitochondrial ribosomal protein L37##AF325707|MRPL37|51253|mitochondrial ribosomal protein L37##AY421759|MRPL37|51253|mitochondrial ribosomal protein L37##BC000041|MRPL37|51253|mitochondrial ribosomal protein L37##AK026171|MRPL37|51253|mitochondrial ribosomal protein L37##AK024572|MRPL37|51253|mitochondrial ribosomal protein L37##NM_016491|MRPL37|51253|mitochondrial ribosomal protein L37##AK289474|SSBP3|23648|single stranded DNA binding protein 3##BC003605|SSBP3|23648|single stranded DNA binding protein 3##BC066365|SSBP3|23648|single stranded DNA binding protein 3##AF500116|SSBP3|23648|single stranded DNA binding protein 3##NM_018070|SSBP3|23648|single stranded DNA binding protein 3##NM_145716|SSBP3|23648|single stranded DNA binding protein 3##NM_001009955|SSBP3|23648|single stranded DNA binding protein 3	0.981229	CTCF.p2:-6:0.981
chr21	30720948	30721039	reg1017835.p2	7.031	+	AF026199 NM_206866	-49257	+	TSC_hg19_v1_chr21_+_30671242 AK313791 BC063307	-49752	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	-49773	+	L19058 NM_000830 NM_175611 AK296404 BC028238	591296	-	BC101503 BC101505 NM_012131 AY358094	818013	-	AB590283 CU676754 DQ892002 DQ895192 BC058004 AY358707 BC020866 AK223512 AK022269 NM_199328	867362	-	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AK313791|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC063307|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##L19058|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_000830|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_175611|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##AK296404|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC028238|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC101503|CLDN17|26285|claudin 17##BC101505|CLDN17|26285|claudin 17##NM_012131|CLDN17|26285|claudin 17##AY358094|CLDN17|26285|claudin 17##DQ892002|CLDN8|9073|claudin 8##DQ895192|CLDN8|9073|claudin 8##BC058004|CLDN8|9073|claudin 8##AY358707|CLDN8|9073|claudin 8##BC020866|CLDN8|9073|claudin 8##AK223512|CLDN8|9073|claudin 8##AK022269|CLDN8|9073|claudin 8##NM_199328|CLDN8|9073|claudin 8	0.079651	
chr21	43835342	43835522	reg1017204.p1	7.031	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-11420	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-19271	-	M12075 BC032811 NM_003225 X00474 X52003	-48810	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	80948	-	AJ269529 NM_018964	84309	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	98571	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.0	
chr6	41159458	41159562	reg1019502.p2	7.031	+	NM_018965 TSC_hg19_v1_chr6_-_41130927 AB062787	-28567	-	TSC_hg19_v1_chr6_-_41130901 AK312215 AF213457	-28622	-	DQ891310 DQ894494 BC032362 BC018284 TSC_hg19_v1_chr6_-_41130855	-28672	-	AF534824 AK023755 BC125078 BC125079 AY358171 NM_024807	9413	-	AY358271 NM_198153 BC101780 BC105101 BC143652	36558	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	94914	-	NM_018965|TREM2|54209|triggering receptor expressed on myeloid cells 2##AB062787|TREM2|54209|triggering receptor expressed on myeloid cells 2##AK312215|TREM2|54209|triggering receptor expressed on myeloid cells 2##AF213457|TREM2|54209|triggering receptor expressed on myeloid cells 2##DQ891310|TREM2|54209|triggering receptor expressed on myeloid cells 2##DQ894494|TREM2|54209|triggering receptor expressed on myeloid cells 2##BC032362|TREM2|54209|triggering receptor expressed on myeloid cells 2##BC018284|TREM2|54209|triggering receptor expressed on myeloid cells 2##AF534824|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AK023755|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125078|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125079|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AY358171|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_024807|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1	1.007508	CTCF.p2:-7:0.993
chr7	150788590	150788732	reg1022196.p1	7.031	+	TSC_hg19_v1_chr7_+_150783865 AF359283 NM_001042535 NM_031946 BC069236 AF413079 AB209781	-4742	+	TSC_hg19_v1_chr7_+_150782953 AK055393	-5720	+	TSC_hg19_v1_chr7_-_150780616 AY037155 BC000936 NM_001136044	-8057	-	TSC_hg19_v1_chr7_+_150811722 BC044644 EU831441 EU831533	23126	+	NM_001098834	76205	-	AF417920 NM_001142459 NM_001142460	95816	-	AF359283|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##NM_001042535|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##NM_031946|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##BC069236|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AF413079|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AB209781|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AK055393|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##AY037155|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1##BC000936|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1##NM_001136044|TMUB1|83590|transmembrane and ubiquitin-like domain containing 1##BC044644|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##EU831441|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##EU831533|AGAP3|116988|ArfGAP with GTPase domain, ankyrin repeat and PH domain 3##NM_001098834|GBX1|2636|gastrulation brain homeobox 1##AF417920|ASB10|136371|ankyrin repeat and SOCS box containing 10##NM_001142459|ASB10|136371|ankyrin repeat and SOCS box containing 10##NM_001142460|ASB10|136371|ankyrin repeat and SOCS box containing 10	0.139172	
chr10	74056966	74057147	reg1017193.p1	7.030	+	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-23232	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-80945	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-81268	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	57622	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	57870	-	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	226663	-	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1	0.0	
chr1	120428920	120429055	reg1020095.p2	7.030	+	NM_001047980	-41209	-	AY007243 AF345934 BC017089 TSC_hg19_v1_chr1_-_120354084 AF254415 AY126670 AY126671 AY126672 NM_001159352 NM_001159353 NM_032044	-74857	-	CR456850 BC044217 X83618 AK301594 AK313590 TSC_hg19_v1_chr1_-_120311529 AK302276 AK303777 NM_001166107 NM_005518	-117477	-	BC028372 AY358734 AK292483 NM_021794	10144	-	U77493 TSC_hg19_v1_chr1_-_120484245	55252	-	AF308601 TSC_hg19_v1_chr1_-_120612027 AF315356	183042	-	NM_001047980|NBPF7|343505|neuroblastoma breakpoint family, member 7##AY007243|REG4|83998|regenerating islet-derived family, member 4##AF345934|REG4|83998|regenerating islet-derived family, member 4##BC017089|REG4|83998|regenerating islet-derived family, member 4##AF254415|REG4|83998|regenerating islet-derived family, member 4##AY126670|REG4|83998|regenerating islet-derived family, member 4##AY126671|REG4|83998|regenerating islet-derived family, member 4##AY126672|REG4|83998|regenerating islet-derived family, member 4##NM_001159352|REG4|83998|regenerating islet-derived family, member 4##NM_001159353|REG4|83998|regenerating islet-derived family, member 4##NM_032044|REG4|83998|regenerating islet-derived family, member 4##CR456850|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##BC044217|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##X83618|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK301594|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK313590|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK302276|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK303777|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_001166107|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_005518|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##BC028372|ADAM30|11085|ADAM metallopeptidase domain 30##AY358734|ADAM30|11085|ADAM metallopeptidase domain 30##AK292483|ADAM30|11085|ADAM metallopeptidase domain 30##NM_021794|ADAM30|11085|ADAM metallopeptidase domain 30##U77493|NOTCH2|4853|notch 2##AF308601|NOTCH2|4853|notch 2##AF315356|NOTCH2|4853|notch 2	0.999526	CTCF.p2:-8:1.000
chr20	7961377	7961500	reg1020784.p2	7.030	+	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	-40336	-	BC069214 NM_001200	-1212694	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-1857275	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	38862	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	38969	-	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	39034	-	AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4	0.699295	CTCF.p2:-11:0.699
chr2	17852420	17852568	reg1020293.p1	7.030	+	TSC_hg19_v1_chr2_+_17721989 AF039555 U14747 AB001104	-130474	+	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	-130607	+	DQ860102 NM_001099218	-152789	-	TSC_hg19_v1_chr2_-_17935047 BC032675	82534	-	TSC_hg19_v1_chr2_-_17935077 AL832979 AL136544	82572	-	BC039828 TSC_hg19_v1_chr2_-_17935086 NM_001142286 NM_024624	82601	-	AF039555|VSNL1|7447|visinin-like 1##U14747|VSNL1|7447|visinin-like 1##AB001104|VSNL1|7447|visinin-like 1##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##BC032675|SMC6|79677|structural maintenance of chromosomes 6##AL832979|SMC6|79677|structural maintenance of chromosomes 6##AL136544|SMC6|79677|structural maintenance of chromosomes 6##BC039828|SMC6|79677|structural maintenance of chromosomes 6##NM_001142286|SMC6|79677|structural maintenance of chromosomes 6##NM_024624|SMC6|79677|structural maintenance of chromosomes 6	0.984911	CTCF.p2:13:0.985
chr4	143804738	143804859	reg1018634.p1	7.030	+	NM_001101669 NM_003866	-37195	-	AK290619 NM_000585 NM_172175 BC018149 U14407	-1247032	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-1662712	+	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	301266	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	301327	+	NM_002039 NM_207123 AK289767 BC064848	453217	+	NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38##NM_002039|GAB1|2549|GRB2-associated binding protein 1##NM_207123|GAB1|2549|GRB2-associated binding protein 1##AK289767|GAB1|2549|GRB2-associated binding protein 1##BC064848|GAB1|2549|GRB2-associated binding protein 1	0.912696	CTCF.p2:-15:0.913
chr5	164456640	164456757	reg1019479.p1	7.030	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-1524055	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-1526410	+	NM_001142556 NM_001142557 NM_012484 NM_012485 BC057235 AK313603 BC030505 TSC_hg19_v1_chr5_+_162887665 AK302975 BC006984 AK303616 BC070281 BC017793 U29343 AF032862 BC108904 BC108905 BC107869 AK290577	-1569103	+	HE578282 HE578283 NM_001122679	2255144	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	3262123	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	3456776	+	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001142556|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001142557|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012484|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012485|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC057235|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK313603|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC030505|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK302975|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK303616|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC070281|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC017793|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##U29343|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AF032862|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108904|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108905|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC107869|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK290577|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.742993	CTCF.p2:18:0.329	CTCF.p2:-43:0.414
chr9	140429419	140429594	reg1019042.p2	7.030	+	AY255128 AY255129 AY255130 AY255131 AY255132 NM_001130969 NM_001130970 NM_001130971 NM_001178064 NM_015537 TSC_hg19_v1_chr9_-_140353787	-75704	-	TSC_hg19_v1_chr9_-_140353758 AK074602 BC072412	-75746	-	TSC_hg19_v1_chr9_-_140353612 BC110498	-75874	-	AK125060 AK126267 TSC_hg19_v1_chr9_-_140444881 NM_001098537 NM_152286	15404	-	NM_032477 TSC_hg19_v1_chr9_+_140446353 BC040035 AY232291	16853	+	CU675946 TSC_hg19_v1_chr9_-_140473350 AK307180 BC003123 BC016349 BC017335	43784	-	AY255128|NELF|26012|nasal embryonic LHRH factor##AY255129|NELF|26012|nasal embryonic LHRH factor##AY255130|NELF|26012|nasal embryonic LHRH factor##AY255131|NELF|26012|nasal embryonic LHRH factor##AY255132|NELF|26012|nasal embryonic LHRH factor##NM_001130969|NELF|26012|nasal embryonic LHRH factor##NM_001130970|NELF|26012|nasal embryonic LHRH factor##NM_001130971|NELF|26012|nasal embryonic LHRH factor##NM_001178064|NELF|26012|nasal embryonic LHRH factor##NM_015537|NELF|26012|nasal embryonic LHRH factor##AK074602|NELF|26012|nasal embryonic LHRH factor##BC072412|NELF|26012|nasal embryonic LHRH factor##BC110498|NELF|26012|nasal embryonic LHRH factor##AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7##AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_032477|MRPL41|64975|mitochondrial ribosomal protein L41##BC040035|MRPL41|64975|mitochondrial ribosomal protein L41##AY232291|MRPL41|64975|mitochondrial ribosomal protein L41##AK307180|WDR85|92715|WD repeat domain 85##BC003123|WDR85|92715|WD repeat domain 85##BC016349|WDR85|92715|WD repeat domain 85##BC017335|WDR85|92715|WD repeat domain 85	0.050173	
chr15	75321915	75322095	reg1000509.p2	7.029	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-6024	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-6077	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-34098	+	AK128205 TSC_hg19_v1_chr15_+_75491259	169241	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	172207	+	BC110367 TSC_hg19_v1_chr15_+_75494233	172228	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chr10	93454083	93454190	reg1021573.p1	7.028	+	BX537399 NM_005398 TSC_hg19_v1_chr10_-_93392859	-61278	-	AF087874 Y18207 TSC_hg19_v1_chr10_-_93392829 AK299398 AK313149	-61322	-	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	-61375	-	AF438201 TSC_hg19_v1_chr10_+_93558136	103967	+	TSC_hg19_v1_chr10_+_93558164 AF305081 NM_025235	104016	+	AK314612 TSC_hg19_v1_chr10_+_93558182 AF309033	104053	+	BX537399|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##NM_005398|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AF087874|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##Y18207|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK299398|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK313149|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AF438201|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF305081|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##NM_025235|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AK314612|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF309033|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	0.349502	CTCF.p2:1:0.321
chr14	67213114	67213256	reg1022040.p1	7.028	+	AJ272343 TSC_hg19_v1_chr14_+_66975224 AK294532 AK297447 BC030016 DQ892463 DQ895675 AB385462 AJ272033	-237960	+	TSC_hg19_v1_chr14_+_66974870 AK315569	-238316	+	TSC_hg19_v1_chr14_+_66974859 AK025169	-238332	+	NM_173526 AK093449 AX748134 AK302154 BC037380 BC050401	442958	+	BC095485 TSC_hg19_v1_chr14_+_67708117 NM_022474 AK291240 AK098373 BC053366 AL832326 BC129933 AL832578 BC037966 AK057160	494978	+	CU692980 TSC_hg19_v1_chr14_-_67826522 BC001411 AF104629 BC031002 AK315784 AK001155 AF145316 AF077614 AF100741 BC025373 NM_015994	613381	-	AJ272343|GPHN|10243|gephyrin##AK294532|GPHN|10243|gephyrin##AK297447|GPHN|10243|gephyrin##BC030016|GPHN|10243|gephyrin##DQ892463|GPHN|10243|gephyrin##DQ895675|GPHN|10243|gephyrin##AJ272033|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##NM_173526|FAM71D|161142|family with sequence similarity 71, member D##AK093449|FAM71D|161142|family with sequence similarity 71, member D##AK302154|FAM71D|161142|family with sequence similarity 71, member D##BC037380|FAM71D|161142|family with sequence similarity 71, member D##BC050401|FAM71D|161142|family with sequence similarity 71, member D##BC095485|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##NM_022474|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK291240|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK098373|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC053366|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832326|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC129933|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832578|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC037966|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	0.9877	CTCF.p2:14:0.988
chr12	129454072	129454191	reg1017901.p1	7.027	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	-116044	+	BC043528 TSC_hg19_v1_chr12_+_129337985	-116147	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	-145688	-	BC114626 BC114936 NM_133448 AB061814	934080	-	AK056047 TSC_hg19_v1_chr12_-_130646911	1192725	-	TSC_hg19_v1_chr12_+_130647008 BC070037 NM_007197	1192879	+	AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D##AK056047|FLJ31485|440119|uncharacterized LOC440119##BC070037|FZD10|11211|frizzled family receptor 10##NM_007197|FZD10|11211|frizzled family receptor 10	0.53403	CTCF.p2:-10:0.534
chr12	89411077	89411187	reg1017664.p1	7.027	+	BC074725 AK293002 AF119835 AF400437 BC126166 BC143899 BC069797 BC069733 BC069783 TSC_hg19_v1_chr12_-_88974249 AF400436 M59964 AK290319 NM_000899 NM_003994	-436960	-	TSC_hg19_v1_chr12_+_88536083 AK290436 AK302755 AK310375 AK310393 NM_181783 CR749309 BX538169 CR749244 CR933632 AJ697717 BC117177 BC117175	-874984	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	-875263	-	TSC_hg19_v1_chr12_+_89744716 AK124265	333620	+	TSC_hg19_v1_chr12_-_89745782 AB451265 AB451393 BT006895 CU678402 AB463588 DQ892490 DQ895701	334653	-	TSC_hg19_v1_chr12_-_89746181 BC003143 BC003562 AB013382 AB013602 X93920 AK222882	334959	-	BC074725|KITLG|4254|KIT ligand##AK293002|KITLG|4254|KIT ligand##AF119835|KITLG|4254|KIT ligand##AF400437|KITLG|4254|KIT ligand##BC126166|KITLG|4254|KIT ligand##BC143899|KITLG|4254|KIT ligand##BC069797|KITLG|4254|KIT ligand##BC069733|KITLG|4254|KIT ligand##BC069783|KITLG|4254|KIT ligand##AF400436|KITLG|4254|KIT ligand##M59964|KITLG|4254|KIT ligand##AK290319|KITLG|4254|KIT ligand##NM_000899|KITLG|4254|KIT ligand##NM_003994|KITLG|4254|KIT ligand##AK290436|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK302755|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310375|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310393|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##NM_181783|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749309|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BX538169|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749244|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR933632|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AJ697717|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117177|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117175|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa##AK124265|LOC100131490|100131490|uncharacterized LOC100131490##AB451265|DUSP6|1848|dual specificity phosphatase 6##AB451393|DUSP6|1848|dual specificity phosphatase 6##BT006895|DUSP6|1848|dual specificity phosphatase 6##DQ892490|DUSP6|1848|dual specificity phosphatase 6##DQ895701|DUSP6|1848|dual specificity phosphatase 6##BC003143|DUSP6|1848|dual specificity phosphatase 6##BC003562|DUSP6|1848|dual specificity phosphatase 6##AB013382|DUSP6|1848|dual specificity phosphatase 6##AB013602|DUSP6|1848|dual specificity phosphatase 6##X93920|DUSP6|1848|dual specificity phosphatase 6##AK222882|DUSP6|1848|dual specificity phosphatase 6	0.478352	CTCF.p2:-4:0.478
chr15	30953451	30953589	reg1019031.p1	7.027	+	BC105788 NM_001039841	-34642	+	TSC_hg19_v1_chr15_+_30918372 BC071990	-35134	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-267808	-	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	242554	+	CR936734 CR936727 TSC_hg19_v1_chr15_+_31196114 AB023235	242597	+	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	330247	-	BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936734|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936727|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AB023235|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10	0.369046	CTCF.p2:-27:0.369
chr2	206812927	206813039	reg1020327.p2	7.027	+	TSC_hg19_v1_chr2_+_206547371 AK290934	-265622	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	-265805	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-1402264	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	137928	-	AK295987 NM_001199984	210934	-	X61100 AK098395 BC018900 BC022368 TSC_hg19_v1_chr2_-_207024145 AK300585 BC030833 AK295705 AK295966 AK298320 BC004133 NM_001199981 NM_001199982 NM_001199983 NM_005006	211189	-	AK290934|NRP2|8828|neuropilin 2##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D##AK295987|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199984|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	0.999738	CTCF.p2:5:1.000
chr2	68073721	68073830	reg1022347.p1	7.027	+	TSC_hg19_v1_chr2_+_67624467 NM_019002 AJ242682 BC033075 BC040001	-449293	+	TSC_hg19_v1_chr2_+_66666452 AK297109	-1407325	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	-1410935	+	BC016284 TSC_hg19_v1_chr2_-_68290140 X95592 BC009584 BC009589 BC005235 AK290451	216359	-	NM_001190263 NM_001190265 NM_006333 NM_173177 TSC_hg19_v1_chr2_-_68290160	216385	-	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	310859	-	NM_019002|ETAA1|54465|Ewing tumor-associated antigen 1##AJ242682|ETAA1|54465|Ewing tumor-associated antigen 1##BC033075|ETAA1|54465|Ewing tumor-associated antigen 1##BC040001|ETAA1|54465|Ewing tumor-associated antigen 1##AK297109|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##BC016284|C1D|10438|C1D nuclear receptor corepressor##X95592|C1D|10438|C1D nuclear receptor corepressor##BC009584|C1D|10438|C1D nuclear receptor corepressor##BC009589|C1D|10438|C1D nuclear receptor corepressor##BC005235|C1D|10438|C1D nuclear receptor corepressor##AK290451|C1D|10438|C1D nuclear receptor corepressor##NM_001190263|C1D|10438|C1D nuclear receptor corepressor##NM_001190265|C1D|10438|C1D nuclear receptor corepressor##NM_006333|C1D|10438|C1D nuclear receptor corepressor##NM_173177|C1D|10438|C1D nuclear receptor corepressor##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92	0.147652	
chr19	43592038	43592138	reg1019585.p2	7.026	+	DQ891359 EU832659 EU832736 M20882 AK002132 BC022316 NM_031246	-5281	-	CU676656 M69245 U25988 BC020711 NM_001113410 NM_002785 NM_203287	-61502	-	BC136401 U18467 BC030979 AK309898 NM_001206650 NM_002783	-150799	-	AB527988 EU831982 EU832075 M73713 M25384 BC012607 NM_001130014 NM_002781	98534	-	U18468 U18469 M94891 X17097 BC008405 BC013431 BC063127 NM_002780 NM_213633 AK075149	117667	-	CR407605 CU676704 DQ891385 DQ894561 U25987 M34481 M94890 M58591 M34421 X17610 AK300187 AK300229 BC005925 BC020759 AK313256 NM_002784	181543	-	DQ891359|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832659|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832736|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M20882|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##BC022316|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##NM_031246|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M69245|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##U25988|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##BC020711|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_001113410|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_002785|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_203287|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##BC136401|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##U18467|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##BC030979|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_001206650|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_002783|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##EU831982|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##EU832075|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M73713|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M25384|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##BC012607|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_001130014|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_002781|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##U18468|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##U18469|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##M94891|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##X17097|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC013431|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC063127|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##NM_002780|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##NM_213633|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK075149|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##CR407605|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##DQ891385|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##DQ894561|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##U25987|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M34481|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M94890|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M58591|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M34421|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##X17610|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK300187|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK300229|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##BC005925|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##BC020759|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK313256|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##NM_002784|PSG9|5678|pregnancy specific beta-1-glycoprotein 9	0.694153	CTCF.p2:7:0.694
chr5	161353067	161353224	reg1019321.p1	7.026	+	NM_001127648 AB590312 DQ890915	-75386	+	NM_001127647	-75754	+	NM_001127646	-77248	+	NM_000816 NM_198903 NM_198904 BC052926 BC036030 X15376 BC059389 BC069348 BC074795 AK315200 AK299640	141700	+	TSC_hg19_v1_chr5_+_162864606 AK316234 NM_004060 NM_199246 AK297190 AK312913 BC007093 BX538035 D78341 L49504 BC000196	1511476	+	AB528197 AM392736 AM393438 FJ215684 AK094647 TSC_hg19_v1_chr5_-_162887097	1533933	-	NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127647|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127646|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK316234|CCNG1|900|cyclin G1##NM_004060|CCNG1|900|cyclin G1##NM_199246|CCNG1|900|cyclin G1##AK297190|CCNG1|900|cyclin G1##AK312913|CCNG1|900|cyclin G1##BC007093|CCNG1|900|cyclin G1##BX538035|CCNG1|900|cyclin G1##D78341|CCNG1|900|cyclin G1##L49504|CCNG1|900|cyclin G1##BC000196|CCNG1|900|cyclin G1##AM392736|NUDCD2|134492|NudC domain containing 2##AM393438|NUDCD2|134492|NudC domain containing 2##FJ215684|NUDCD2|134492|NudC domain containing 2	0.921782	CTCF.p2:22:0.922
chr20	45395895	45396047	reg1022324.p1	7.025	+	AF248053 TSC_hg19_v1_chr20_+_45338287 AK055548 NM_030777 BC101657 BC113423 AK290961 AK315269 AF321240	-57734	+	TSC_hg19_v1_chr20_-_45318164 BC009727 AB017505 AB065434 NM_033550	-77750	-	TSC_hg19_v1_chr20_-_45318084 BC010637 BC035461 AB587589 AK096502 BC066309 BC019621 AK315182	-78004	-	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	127311	+	TSC_hg19_v1_chr20_+_45523505 BC008803	127537	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	127581	+	AF248053|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK055548|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##NM_030777|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC101657|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC113423|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK290961|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK315269|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AF321240|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC009727|TP53RK|112858|TP53 regulating kinase##AB017505|TP53RK|112858|TP53 regulating kinase##AB065434|TP53RK|112858|TP53 regulating kinase##NM_033550|TP53RK|112858|TP53 regulating kinase##BC010637|TP53RK|112858|TP53 regulating kinase##BC035461|TP53RK|112858|TP53 regulating kinase##AK096502|TP53RK|112858|TP53 regulating kinase##BC066309|TP53RK|112858|TP53 regulating kinase##BC019621|TP53RK|112858|TP53 regulating kinase##AK315182|TP53RK|112858|TP53 regulating kinase##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)	0.997101	CTCF.p2:14:0.997
chr21	46331659	46331768	reg1020653.p2	7.025	+	TSC_hg19_v1_chr21_+_46293937 BC092510	-37753	+	TSC_hg19_v1_chr21_-_46293609 AK315626 AK299204 AF149785 NM_004339	-38000	-	TSC_hg19_v1_chr21_-_46293607 BC012858 AK298557	-38110	-	TSC_hg19_v1_chr21_-_46340815 L78790 AK303488 M15395 AK128344	9084	-	AK222505 TSC_hg19_v1_chr21_-_46340824	9118	-	AB208909 TSC_hg19_v1_chr21_-_46340890 NM_000211	9206	-	AK315626|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AK299204|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AF149785|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##NM_004339|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##L78790|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK303488|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##M15395|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK128344|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK222505|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AB208909|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##NM_000211|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)	0.054343	
chr22	31286721	31286851	reg1016977.p1	7.025	+	AF323731 NM_030758 AK097581 AK294007 BC118914 AB051451 AB384622 AF288741	-195941	+	BC031973 TSC_hg19_v1_chr22_+_31063955	-222852	+	TSC_hg19_v1_chr22_-_31063837 BC030987 BC028724 AF461689 AK056074 NM_152511	-222951	-	AB020659 NM_014941	77400	-	AK056480 TSC_hg19_v1_chr22_+_31366813	79951	+	TSC_hg19_v1_chr22_+_31477303 NM_006932 NM_134269 NM_134270 AK128719 AF064238 AJ010306 AY061971 AY061972 Y13492 AK096953 AK293681 BC034237 AK300854	190496	+	AF323731|OSBP2|23762|oxysterol binding protein 2##NM_030758|OSBP2|23762|oxysterol binding protein 2##AK097581|OSBP2|23762|oxysterol binding protein 2##AK294007|OSBP2|23762|oxysterol binding protein 2##BC118914|OSBP2|23762|oxysterol binding protein 2##AB051451|OSBP2|23762|oxysterol binding protein 2##AF288741|OSBP2|23762|oxysterol binding protein 2##BC030987|DUSP18|150290|dual specificity phosphatase 18##BC028724|DUSP18|150290|dual specificity phosphatase 18##AF461689|DUSP18|150290|dual specificity phosphatase 18##AK056074|DUSP18|150290|dual specificity phosphatase 18##NM_152511|DUSP18|150290|dual specificity phosphatase 18##AB020659|MORC2|22880|MORC family CW-type zinc finger 2##NM_014941|MORC2|22880|MORC family CW-type zinc finger 2##NM_006932|SMTN|6525|smoothelin##NM_134269|SMTN|6525|smoothelin##NM_134270|SMTN|6525|smoothelin##AK128719|SMTN|6525|smoothelin##AF064238|SMTN|6525|smoothelin##AJ010306|SMTN|6525|smoothelin##AY061971|SMTN|6525|smoothelin##AY061972|SMTN|6525|smoothelin##Y13492|SMTN|6525|smoothelin##AK096953|SMTN|6525|smoothelin##AK293681|SMTN|6525|smoothelin##BC034237|SMTN|6525|smoothelin##AK300854|SMTN|6525|smoothelin	0.99725	CTCF.p2:-6:0.997
chr9	115096270	115096381	reg1016374.p2	7.025	+	TSC_hg19_v1_chr9_-_115095957 NM_001163788 NM_001163790 NM_001244896 NM_001244897 NM_005156	-352	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	-476	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	-1038	-	NM_001195822 NM_032303 AK098721 TSC_hg19_v1_chr9_+_115142387 AY093428 BC004331 AK289929 AK292486 AK313605 AK225946 AK303645 AK301469	45965	+	TSC_hg19_v1_chr9_+_115142411 BC095451 CU678670	46093	+	TSC_hg19_v1_chr9_+_115249149 AK096613 NM_133465	152837	+	NM_001163788|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001163790|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244896|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244897|PTBP3|9991|polypyrimidine tract binding protein 3##NM_005156|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001195822|HSDL2|84263|hydroxysteroid dehydrogenase like 2##NM_032303|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK098721|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AY093428|HSDL2|84263|hydroxysteroid dehydrogenase like 2##BC004331|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK289929|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK292486|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK313605|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK225946|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK303645|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK301469|HSDL2|84263|hydroxysteroid dehydrogenase like 2##BC095451|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK096613|KIAA1958|158405|KIAA1958##NM_133465|KIAA1958|158405|KIAA1958	0.962453	CTCF.p2:-36:0.943
chr9	136964415	136964527	reg1018517.p1	7.025	+	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	-30845	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	-31278	-	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	-107025	-	NM_017588 TSC_hg19_v1_chr9_+_137001212	36739	+	TSC_hg19_v1_chr9_+_137001223 BC001635	36754	+	AK000552 TSC_hg19_v1_chr9_+_137001248 AK025810	36778	+	BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_017588|WDR5|11091|WD repeat domain 5##BC001635|WDR5|11091|WD repeat domain 5##AK000552|WDR5|11091|WD repeat domain 5##AK025810|WDR5|11091|WD repeat domain 5	0.654923	CTCF.p2:18:0.655
chr1	164587218	164587329	reg1019764.p1	7.024	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	-58287	+	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	-58682	+	NM_031423 NM_145697 TSC_hg19_v1_chr1_+_163291746 AK093348 AX748068 AF326731 BC008489 AB050577	-1295497	+	TSC_hg19_v1_chr1_+_164818083 AK022520	230850	+	AK122800 NM_001174069	738202	-	AK127724 NM_177398	738678	-	AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_031423|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_145697|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK093348|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AF326731|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC008489|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AB050577|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha	0.477729	CTCF.p2:-3:0.478
chr1	56874882	56874990	reg1020194.p2	7.024	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-1193852	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-1193900	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-1369712	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	170083	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	170194	-	AK312439 TSC_hg19_v1_chr1_-_57045216	170281	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.131475	
chr20	25278637	25278752	reg1018416.p4	7.024	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	-49936	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	-102214	+	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	-102324	+	CU680756 AK075023 AK290815 AK293495 TSC_hg19_v1_chr20_-_25371426	92691	-	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	92832	-	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	109628	+	NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK075023|ABHD12|26090|abhydrolase domain containing 12##AK290815|ABHD12|26090|abhydrolase domain containing 12##AK293495|ABHD12|26090|abhydrolase domain containing 12##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	0.470769	CTCF.p2:-6:0.471
chr11	68033992	68034132	reg1021194.p1	7.023	+	TSC_hg19_v1_chr11_-_67981112 AF264782 BC002522 BC065287 BC087834 NM_016028 NM_017635 BC108304 AK314336 AK299201	-53083	-	NM_001277 NM_212469 TSC_hg19_v1_chr11_-_67888859	-145174	-	D10704 BC036471 TSC_hg19_v1_chr11_-_67888844	-145305	-	TSC_hg19_v1_chr11_-_68039418 AF264781	5324	-	TSC_hg19_v1_chr11_-_68039453 NM_022338	5396	-	TSC_hg19_v1_chr11_+_68080058 AB017498 NM_002335 AF077820 AF064548 BC150595 BC098397	46027	+	AF264782|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC002522|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC065287|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC087834|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_016028|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_017635|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC108304|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK314336|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK299201|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_001277|CHKA|1119|choline kinase alpha##NM_212469|CHKA|1119|choline kinase alpha##D10704|CHKA|1119|choline kinase alpha##BC036471|CHKA|1119|choline kinase alpha##AF264781|C11orf24|53838|chromosome 11 open reading frame 24##NM_022338|C11orf24|53838|chromosome 11 open reading frame 24##AB017498|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_002335|LRP5|4041|low density lipoprotein receptor-related protein 5##AF077820|LRP5|4041|low density lipoprotein receptor-related protein 5##AF064548|LRP5|4041|low density lipoprotein receptor-related protein 5##BC150595|LRP5|4041|low density lipoprotein receptor-related protein 5##BC098397|LRP5|4041|low density lipoprotein receptor-related protein 5	0.0	
chr20	61854962	61855083	reg1006600.p2	7.023	+	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	-7499	-	BC137288 BC137308 NM_080606	-216636	-	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-270897	+	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	12319	+	TSC_hg19_v1_chr20_-_61884664 AK308958	29711	-	CU692040 AK126246 TSC_hg19_v1_chr20_-_61885841 BC041812 NM_152864	30824	-	BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7##AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4##AK126246|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4##BC041812|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4##NM_152864|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4	0.811762	CTCF.p2:28:0.670
chr5	148377867	148377988	reg1020307.p1	7.023	+	NM_000024 TSC_hg19_v1_chr5_+_148206185 AK313151 BC012481 AK223025 BC073856 BC063486 X04827	-171741	+	AK308471 TSC_hg19_v1_chr5_-_148034091	-343837	-	AJ131724 TSC_hg19_v1_chr5_-_148033739 NM_000870	-344200	-	AB075865 AL832651 AK300420 TSC_hg19_v1_chr5_-_148442626 BC113879 BC114486 AY341075 AB070620 NM_024577	64744	-	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	143263	+	TSC_hg19_v1_chr5_+_148651421 NM_001146337 NM_152406 BC040723	273487	+	NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface##X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131724|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000870|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3##NM_001146337|AFAP1L1|134265|actin filament associated protein 1-like 1##NM_152406|AFAP1L1|134265|actin filament associated protein 1-like 1##BC040723|AFAP1L1|134265|actin filament associated protein 1-like 1	0.995551	CTCF.p2:0:0.996
chr6	27125848	27125971	reg1018651.p1	7.023	+	BC093849 BC093851 TSC_hg19_v1_chr6_+_27114884 AK312232 AB528147 BC134366 BC148293 NM_080596	-11026	+	AB590085 EU446970 TSC_hg19_v1_chr6_-_27114635 AJ223352 BC051872 BC064959 BC108737 BC000893 AK292062 NM_080593	-11302	-	BC016336 BC075806 AB590709 BC066250 BC067496 BC067497 HQ257982 NM_003495	-18836	+	AK097918 AK314037 NM_005865 AF052514 AK303106 AB590521	89587	+	NM_033482	154101	-	AF352327 AF336874 BC107050 NM_032030	166649	+	BC093849|HIST1H2AH|85235|histone cluster 1, H2ah##BC093851|HIST1H2AH|85235|histone cluster 1, H2ah##AK312232|HIST1H2AH|85235|histone cluster 1, H2ah##BC134366|HIST1H2AH|85235|histone cluster 1, H2ah##BC148293|HIST1H2AH|85235|histone cluster 1, H2ah##NM_080596|HIST1H2AH|85235|histone cluster 1, H2ah##EU446970|HIST1H2BK|85236|histone cluster 1, H2bk##AJ223352|HIST1H2BK|85236|histone cluster 1, H2bk##BC051872|HIST1H2BK|85236|histone cluster 1, H2bk##BC064959|HIST1H2BK|85236|histone cluster 1, H2bk##BC108737|HIST1H2BK|85236|histone cluster 1, H2bk##BC000893|HIST1H2BK|85236|histone cluster 1, H2bk##AK292062|HIST1H2BK|85236|histone cluster 1, H2bk##NM_080593|HIST1H2BK|85236|histone cluster 1, H2bk##BC016336|HIST1H4I|8294|histone cluster 1, H4i##BC075806|HIST1H4I|8294|histone cluster 1, H4i##BC066250|HIST1H4I|8294|histone cluster 1, H4i##BC067496|HIST1H4I|8294|histone cluster 1, H4i##BC067497|HIST1H4I|8294|histone cluster 1, H4i##HQ257982|HIST2H4B|554313|histone cluster 2, H4b##NM_003495|HIST1H4I|8294|histone cluster 1, H4i##AK097918|PRSS16|10279|protease, serine, 16 (thymus)##AK314037|PRSS16|10279|protease, serine, 16 (thymus)##NM_005865|PRSS16|10279|protease, serine, 16 (thymus)##AF052514|PRSS16|10279|protease, serine, 16 (thymus)##AK303106|PRSS16|10279|protease, serine, 16 (thymus)##NM_033482|POM121L2|94026|POM121 membrane glycoprotein-like 2##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83	0.817752	CTCF.p2:-12:0.818
chr17	21360467	21360576	reg1019433.p1	7.022	+	FJ434338 NM_001194958	-52074	+	TSC_hg19_v1_chr17_+_21279667 BC027982 NM_021012	-80839	+	NM_002756	-169174	+	TSC_hg19_v1_chr17_-_21454933 AK056436 BC132738 BC136630 BC019938 BC010612 BC052777 BC053952 NM_001113434	94402	-	NM_001190452	661915	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	4260601	+	FJ434338|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##NM_001194958|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##BC027982|KCNJ12|3768|potassium inwardly-rectifying channel, subfamily J, member 12##NM_021012|KCNJ12|3768|potassium inwardly-rectifying channel, subfamily J, member 12##NM_002756|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK056436|C17orf51|339263|chromosome 17 open reading frame 51##BC132738|C17orf51|339263|chromosome 17 open reading frame 51##BC136630|C17orf51|339263|chromosome 17 open reading frame 51##BC019938|C17orf51|339263|chromosome 17 open reading frame 51##BC010612|C17orf51|339263|chromosome 17 open reading frame 51##BC052777|C17orf51|339263|chromosome 17 open reading frame 51##BC053952|C17orf51|339263|chromosome 17 open reading frame 51##NM_001113434|C17orf51|339263|chromosome 17 open reading frame 51##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1	0.658266	CTCF.p2:-6:0.658
chr11	23135290	23135419	reg1020611.p1	7.021	+	NM_001195637	-253383	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-284009	-	TSC_hg19_v1_chr11_+_22696382 CU680566 AB590780 CR450285	-438956	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	1383295	+	NM_031418 AK302659	3218376	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	3458386	-	NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##CR450285|GAS2|2620|growth arrest-specific 2##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated	0.160705	
chr15	61913365	61913524	reg1021295.p2	7.021	+	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	-391947	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	-392020	-	U04899 U04898 NM_002943 NM_134260	-993759	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	439170	-	NM_207322 AF504646	445744	+	NM_001007595	544037	-	NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B	0.988479	CTCF.p2:16:0.988
chr2	106398797	106398922	reg1023124.p1	7.021	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	-37316	+	NM_201557	-343630	-	TSC_hg19_v1_chr2_-_106015453 BC093049 CR936799 BC036085 BC021049 AK313841 L42176 NM_001039492 BC012742 BC014397 DQ266432 NM_001450 NM_201555	-383308	-	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	34116	+	NM_001004720 BC000103	69402	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	283305	+	NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##NM_201557|FHL2|2274|four and a half LIM domains 2##BC093049|FHL2|2274|four and a half LIM domains 2##CR936799|FHL2|2274|four and a half LIM domains 2##BC036085|FHL2|2274|four and a half LIM domains 2##AK313841|FHL2|2274|four and a half LIM domains 2##L42176|FHL2|2274|four and a half LIM domains 2##NM_001039492|FHL2|2274|four and a half LIM domains 2##BC012742|FHL2|2274|four and a half LIM domains 2##BC014397|FHL2|2274|four and a half LIM domains 2##DQ266432|FHL2|2274|four and a half LIM domains 2##NM_001450|FHL2|2274|four and a half LIM domains 2##NM_201555|FHL2|2274|four and a half LIM domains 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40	0.095633	
chr4	41695768	41695886	reg1010239.p3	7.021	+	TSC_hg19_v1_chr4_+_41614937 AK299835 CU686623	-80815	+	TSC_hg19_v1_chr4_+_41614918 AK298915 AK299297 BC068200 BX537916 CR749205 NM_001112719 NM_001112720	-80908	+	AK294774 TSC_hg19_v1_chr4_+_41614797	-81063	+	TSC_hg19_v1_chr4_+_41700736 AL117572	4949	+	BC017199 TSC_hg19_v1_chr4_-_41750743 AK311082	54905	-	TSC_hg19_v1_chr4_-_41750938 D82344 NM_003924	55134	-	AK299835|LIMCH1|22998|LIM and calponin homology domains 1##AK298915|LIMCH1|22998|LIM and calponin homology domains 1##AK299297|LIMCH1|22998|LIM and calponin homology domains 1##BC068200|LIMCH1|22998|LIM and calponin homology domains 1##BX537916|LIMCH1|22998|LIM and calponin homology domains 1##CR749205|LIMCH1|22998|LIM and calponin homology domains 1##NM_001112719|LIMCH1|22998|LIM and calponin homology domains 1##NM_001112720|LIMCH1|22998|LIM and calponin homology domains 1##AK294774|LIMCH1|22998|LIM and calponin homology domains 1##AL117572|LIMCH1|22998|LIM and calponin homology domains 1##BC017199|PHOX2B|8929|paired-like homeobox 2b##D82344|PHOX2B|8929|paired-like homeobox 2b##NM_003924|PHOX2B|8929|paired-like homeobox 2b	0.990995	CTCF.p2:-5:0.991
chr1	53910389	53910505	reg1019736.p1	7.020	+	TSC_hg19_v1_chr1_-_53793743 NM_001018054 NM_004631 NM_017522 NM_033300	-116666	-	Z75190 D50678 BC051836 TSC_hg19_v1_chr1_-_53793738	-116785	-	DQ891289 DQ894473 AB528424 TSC_hg19_v1_chr1_-_53704191 AF035940 BC018211 AK297895 AF067173 AK312113 NM_002370	-206246	-	AK057273 NM_033067 AJ291671	14660	+	AK302085 TSC_hg19_v1_chr1_+_53925533 BC029566	15083	+	AK090634 AX746550 NM_147193	289429	-	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##DQ891289|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##DQ894473|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF035940|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##BC018211|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK297895|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF067173|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK312113|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##NM_002370|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1	0.694155	CTCF.p2:-19:0.694
chr7	152530628	152530741	reg1020222.p1	7.020	+	TSC_hg19_v1_chr7_+_152456872 NM_001040135 NM_020445 AK315534 BC008682 AK294292 AK316078 AF086920 BC015207 AF023453 CU677239 CU679037 DQ894754 EU176295	-73791	+	AB590731 CU692064 TSC_hg19_v1_chr7_-_152373227 BC042137 AK313607 Y08837 AF035587 NM_005431	-157476	-	TSC_hg19_v1_chr7_+_152161285 BC036622	-369445	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	1053716	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	1219074	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	1471701	+	NM_001040135|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##NM_020445|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK315534|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC008682|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK294292|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK316078|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF086920|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC015207|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF023453|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##DQ894754|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##EU176295|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC042137|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AK313607|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##Y08837|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AF035587|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##NM_005431|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##BC036622|LOC100128822|100128822|uncharacterized LOC100128822##BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6	0.01939	
chr8	55344427	55344530	reg1021231.p2	7.020	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-296667	+	TSC_hg19_v1_chr8_-_55014465 CR457103 CU679013 DQ891527 DQ894717 BC010397 AF077198 AF077199 AF291053 AK307277 AK313739 AF081281 AK298206 AK289400 BC008652 AF052112 NM_006330	-329980	-	TSC_hg19_v1_chr8_-_54934990 NM_006756 NM_201437	-409459	-	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	26038	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	184174	+	BC106028 AY534241 NM_052898	670536	+	BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##CR457103|LYPLA1|10434|lysophospholipase I##DQ891527|LYPLA1|10434|lysophospholipase I##DQ894717|LYPLA1|10434|lysophospholipase I##BC010397|LYPLA1|10434|lysophospholipase I##AF077198|LYPLA1|10434|lysophospholipase I##AF077199|LYPLA1|10434|lysophospholipase I##AF291053|LYPLA1|10434|lysophospholipase I##AK307277|LYPLA1|10434|lysophospholipase I##AK313739|LYPLA1|10434|lysophospholipase I##AF081281|LYPLA1|10434|lysophospholipase I##AK298206|LYPLA1|10434|lysophospholipase I##AK289400|LYPLA1|10434|lysophospholipase I##BC008652|LYPLA1|10434|lysophospholipase I##AF052112|LYPLA1|10434|lysophospholipase I##NM_006330|LYPLA1|10434|lysophospholipase I##NM_006756|TCEA1|6917|transcription elongation factor A (SII), 1##NM_201437|TCEA1|6917|transcription elongation factor A (SII), 1##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4	0.963339	CTCF.p2:-7:0.963
chr10	101860422	101860546	reg1024131.p1	7.019	+	X14329 BC027897 NM_001308 AK313972	-18859	-	TSC_hg19_v1_chr10_-_101769671 AL833283 NM_015221	-90823	-	BC020878 TSC_hg19_v1_chr10_-_101690657 AK128576	-169781	-	TSC_hg19_v1_chr10_-_101945727 NM_006459 AK222480 AK298427 AK315580	85252	-	TSC_hg19_v1_chr10_-_101945787 AF064093 NM_001100626	85318	-	U22512 AF012890 AB590489 BC092514 TSC_hg19_v1_chr10_-_101989331 AF009225 AB209028	128782	-	X14329|CPN1|1369|carboxypeptidase N, polypeptide 1##BC027897|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_001308|CPN1|1369|carboxypeptidase N, polypeptide 1##AK313972|CPN1|1369|carboxypeptidase N, polypeptide 1##AL833283|DNMBP|23268|dynamin binding protein##NM_015221|DNMBP|23268|dynamin binding protein##AK128576|DNMBP|23268|dynamin binding protein##NM_006459|ERLIN1|10613|ER lipid raft associated 1##AK222480|ERLIN1|10613|ER lipid raft associated 1##AK298427|ERLIN1|10613|ER lipid raft associated 1##AK315580|ERLIN1|10613|ER lipid raft associated 1##AF064093|ERLIN1|10613|ER lipid raft associated 1##NM_001100626|ERLIN1|10613|ER lipid raft associated 1##U22512|CHUK|1147|conserved helix-loop-helix ubiquitous kinase##AF012890|CHUK|1147|conserved helix-loop-helix ubiquitous kinase##BC092514|CHUK|1147|conserved helix-loop-helix ubiquitous kinase##AF009225|CHUK|1147|conserved helix-loop-helix ubiquitous kinase##AB209028|CHUK|1147|conserved helix-loop-helix ubiquitous kinase	0.084324	
chr12	85871113	85871218	reg1020028.p2	7.019	+	U31986 TSC_hg19_v1_chr12_+_85673999 BC010923 NM_006982	-197206	+	AK022365 NM_001079910 BC005399 BC093088 AK307799	-441042	+	AK126325 NM_001100917	-441111	-	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	358880	-	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	359072	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	396961	+	U31986|ALX1|8092|ALX homeobox 1##BC010923|ALX1|8092|ALX homeobox 1##NM_006982|ALX1|8092|ALX homeobox 1##AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK126325|TSPAN19|144448|tetraspanin 19##NM_001100917|TSPAN19|144448|tetraspanin 19##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin	0.861744	CTCF.p2:-12:0.862
chr12	87668476	87668596	reg1020543.p1	7.019	+	BC035851 NM_013244	-435879	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	-1400410	+	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	-1438299	-	AL833338 BC062424 AK093140 AX747948 NM_152589	754624	-	TSC_hg19_v1_chr12_+_88429312 AK095477 NM_001009894 CR936776 AK311222 BC058014 BX640968 BX537868 BX648026 AK311153 BC035136 BC092422 AB590923 AM392924 AL137488	760850	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	867333	-	BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AL833338|C12orf50|160419|chromosome 12 open reading frame 50##BC062424|C12orf50|160419|chromosome 12 open reading frame 50##AK093140|C12orf50|160419|chromosome 12 open reading frame 50##NM_152589|C12orf50|160419|chromosome 12 open reading frame 50##AK095477|C12orf29|91298|chromosome 12 open reading frame 29##NM_001009894|C12orf29|91298|chromosome 12 open reading frame 29##CR936776|C12orf29|91298|chromosome 12 open reading frame 29##AK311222|C12orf29|91298|chromosome 12 open reading frame 29##BC058014|C12orf29|91298|chromosome 12 open reading frame 29##BX640968|C12orf29|91298|chromosome 12 open reading frame 29##BX537868|C12orf29|91298|chromosome 12 open reading frame 29##BX648026|C12orf29|91298|chromosome 12 open reading frame 29##AK311153|C12orf29|91298|chromosome 12 open reading frame 29##BC035136|C12orf29|91298|chromosome 12 open reading frame 29##BC092422|C12orf29|91298|chromosome 12 open reading frame 29##AM392924|C12orf29|91298|chromosome 12 open reading frame 29##AL137488|C12orf29|91298|chromosome 12 open reading frame 29##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa	0.0	
chr18	21247217	21247335	reg1020198.p1	7.019	+	TSC_hg19_v1_chr18_-_21242592 CU688952 AK313667 AK057782 BC030622 NM_173505	-4556	-	TSC_hg19_v1_chr18_-_21166458 AK295715 NM_000271	-80766	-	TSC_hg19_v1_chr18_-_21166428 BC063302 AF002020	-80868	-	TSC_hg19_v1_chr18_+_21269416 AK096422	22138	+	TSC_hg19_v1_chr18_+_21269563 BC093406 NM_001127717 NM_198129 AY327115 AY327116	22311	+	TSC_hg19_v1_chr18_+_21452983 NM_000227 NM_001127718 X85107 X84392 AY327114 L34155	205735	+	AK313667|ANKRD29|147463|ankyrin repeat domain 29##AK057782|ANKRD29|147463|ankyrin repeat domain 29##BC030622|ANKRD29|147463|ankyrin repeat domain 29##NM_173505|ANKRD29|147463|ankyrin repeat domain 29##AK295715|NPC1|4864|Niemann-Pick disease, type C1##NM_000271|NPC1|4864|Niemann-Pick disease, type C1##BC063302|NPC1|4864|Niemann-Pick disease, type C1##AF002020|NPC1|4864|Niemann-Pick disease, type C1##AK096422|LAMA3|3909|laminin, alpha 3##BC093406|LAMA3|3909|laminin, alpha 3##NM_001127717|LAMA3|3909|laminin, alpha 3##NM_198129|LAMA3|3909|laminin, alpha 3##AY327115|LAMA3|3909|laminin, alpha 3##AY327116|LAMA3|3909|laminin, alpha 3##NM_000227|LAMA3|3909|laminin, alpha 3##NM_001127718|LAMA3|3909|laminin, alpha 3##X85107|LAMA3|3909|laminin, alpha 3##X84392|LAMA3|3909|laminin, alpha 3##AY327114|LAMA3|3909|laminin, alpha 3##L34155|LAMA3|3909|laminin, alpha 3	0.663768	CTCF.p2:0:0.608
chr6	106748944	106749070	reg1017202.p1	7.019	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	-202203	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	-214772	+	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	-214811	+	BC002699 TSC_hg19_v1_chr6_-_106773313	24301	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	24525	-	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	24656	-	AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	0.895944	CTCF.p2:12:0.896
chr7	123795613	123795706	reg1019964.p2	7.019	+	TSC_hg19_v1_chr7_-_123673486 NM_001136002	-122155	-	AK292229 NM_001174045 NM_001174046 AY920280 AY920281	-229739	+	NM_001174044 NM_003117 NM_153189 AY920278 AY920279 S67798 BC026163	-230333	+	AF502281 CU691802 AB464545 AF017262 TSC_hg19_v1_chr7_-_124405121	609416	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	610137	-	BC130600 BC130604 NM_001024603	635143	-	NM_001136002|TMEM229A|730130|transmembrane protein 229A##AK292229|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174045|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174046|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920280|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920281|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174044|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_003117|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_153189|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920278|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920279|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##S67798|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##BC026163|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AF502281|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##AF017262|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872	0.678876	CTCF.p2:-12:0.679
chrX	15516160	15516264	reg1020670.p2	7.019	+	NM_001018109 NM_003662	-4502	-	BC002517 TSC_hg19_v1_chrX_-_15511423 AK309656 Y07868 Y07867	-4792	-	D89630 AJ000185 AX740237 BC027948 AK313173 AK223160 NM_004469	-113711	-	NM_203281 AK291824 AK313568 X83107	2757	+	NM_001721	9218	+	AK315144 NM_021804 AB193259	104022	-	NM_001018109|PIR|8544|pirin (iron-binding nuclear protein)##NM_003662|PIR|8544|pirin (iron-binding nuclear protein)##BC002517|PIR|8544|pirin (iron-binding nuclear protein)##AK309656|PIR|8544|pirin (iron-binding nuclear protein)##Y07868|PIR|8544|pirin (iron-binding nuclear protein)##Y07867|PIR|8544|pirin (iron-binding nuclear protein)##D89630|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##AJ000185|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##BC027948|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##AK313173|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##AK223160|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##NM_004469|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##NM_203281|BMX|660|BMX non-receptor tyrosine kinase##AK291824|BMX|660|BMX non-receptor tyrosine kinase##AK313568|BMX|660|BMX non-receptor tyrosine kinase##X83107|BMX|660|BMX non-receptor tyrosine kinase##NM_001721|BMX|660|BMX non-receptor tyrosine kinase##AK315144|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##NM_021804|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##AB193259|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	0.998409	CTCF.p2:-4:0.998
chr10	115464940	115465083	reg1020276.p1	7.018	+	TSC_hg19_v1_chr10_+_115439635 AK301437 AK223489 BC015799 AK300578 U40281 U37448 U67320	-25346	+	NM_001227 NM_033338 NM_033339 U67206	-25585	+	NM_033340 U37449 BX647973	-26049	+	AK128811 NM_001193434 NM_001193435 NM_024889	46201	+	BC037870 FJ236306 NM_182601	59566	+	D42045 NM_014881 AK307187	148905	-	AK301437|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##AK223489|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##BC015799|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##AK300578|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U40281|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U37448|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U67320|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##NM_001227|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##NM_033338|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##NM_033339|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U67206|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##NM_033340|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U37449|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##BX647973|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##AK128811|C10orf81|79949|chromosome 10 open reading frame 81##NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81##NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81##NM_024889|C10orf81|79949|chromosome 10 open reading frame 81##BC037870|C10orf81|79949|chromosome 10 open reading frame 81##FJ236306|C10orf81|79949|chromosome 10 open reading frame 81##NM_182601|C10orf81|79949|chromosome 10 open reading frame 81##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A	0.997432	CTCF.p2:-2:0.997
chr3	46538367	46538456	reg1018572.p1	7.018	+	M83205 X52941 AF332168 AY137470 AY178998 AY875691 DQ522304 EU779935 AB527812 AY360320 DQ892855 DQ896102 M83202 M93150 AY165046 AK290859 AK292813 AK303889 BC015822 BC022347 BC015823 AY493417 NM_002343 X53961	-31914	-	AK316330 U84119 AK298035 NM_001199149	-33293	-	AF015525 NM_003965 AF014958 BC071682 BC025717 BC096075 BC096076 BC099623 AK296673 NM_001130910 AK313312 AF015524	-89515	+	AJ312776 NM_031440 BC131756 AY562237	1107	+	NM_024512	69628	-	NM_001174136	77633	+	M83205|LTF|4057|lactotransferrin##X52941|LTF|4057|lactotransferrin##AF332168|LTF|4057|lactotransferrin##AY137470|LTF|4057|lactotransferrin##AY178998|LTF|4057|lactotransferrin##AY875691|LTF|4057|lactotransferrin##DQ522304|LTF|4057|lactotransferrin##EU779935|LTF|4057|lactotransferrin##AY360320|LTF|4057|lactotransferrin##DQ892855|LTF|4057|lactotransferrin##DQ896102|LTF|4057|lactotransferrin##M83202|LTF|4057|lactotransferrin##M93150|LTF|4057|lactotransferrin##AY165046|LTF|4057|lactotransferrin##AK290859|LTF|4057|lactotransferrin##AK292813|LTF|4057|lactotransferrin##AK303889|LTF|4057|lactotransferrin##BC015822|LTF|4057|lactotransferrin##BC022347|LTF|4057|lactotransferrin##BC015823|LTF|4057|lactotransferrin##AY493417|LTF|4057|lactotransferrin##NM_002343|LTF|4057|lactotransferrin##X53961|LTF|4057|lactotransferrin##AK316330|LTF|4057|lactotransferrin##U84119|LTF|4057|lactotransferrin##AK298035|LTF|4057|lactotransferrin##NM_001199149|LTF|4057|lactotransferrin##AF015525|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_003965|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC071682|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC096075|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC096076|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK296673|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_001130910|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK313312|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AF015524|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AJ312776|RTP3|83597|receptor (chemosensory) transporter protein 3##NM_031440|RTP3|83597|receptor (chemosensory) transporter protein 3##BC131756|RTP3|83597|receptor (chemosensory) transporter protein 3##AY562237|RTP3|83597|receptor (chemosensory) transporter protein 3##NM_024512|LRRC2|79442|leucine rich repeat containing 2##NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1	0.862299	CTCF.p2:3:0.862
chr6	144537630	144537810	reg1017247.p2	7.018	+	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	-65999	+	NM_031287 TSC_hg19_v1_chr6_-_144416757	-120958	-	AB528231 AM393071 BC000198 TSC_hg19_v1_chr6_-_144416703 AK312079 AK074417	-121049	-	TSC_hg19_v1_chr6_+_144607461 AK292506	69760	+	NM_007124 X69086	75198	+	AK124757 TSC_hg19_v1_chr6_+_146056061	1518314	+	NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11##NM_031287|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AM393071|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##BC000198|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK312079|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK074417|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK292506|UTRN|7402|utrophin##NM_007124|UTRN|7402|utrophin##X69086|UTRN|7402|utrophin##AK124757|LOC100507557|100507557|uncharacterized LOC100507557	0.0	
chr10	49272460	49272561	reg1019773.p2	7.017	+	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	-64689	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-444568	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	-444901	-	CR749241 NM_001018071	210416	-	TSC_hg19_v1_chr10_+_49514722 AK292523	242276	+	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	337162	+	BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##AK292523|MAPK8|5599|mitogen-activated protein kinase 8##BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8	0.0	
chr13	48033766	48033900	reg1021360.p1	7.017	+	AK314132 BX647777 AK302787 NM_000621 NM_001165947	-562766	-	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	-662518	-	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-906326	+	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	541618	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	577981	+	TSC_hg19_v1_chr13_-_48612129 AK316271	578275	-	AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##AK316271|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.0	
chr20	21487042	21487170	reg1015882.p1	7.017	+	NM_033176 TSC_hg19_v1_chr20_-_21378181	-108992	-	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	-203131	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	-380379	+	NM_002509	7557	-	TSC_hg19_v1_chr20_+_21686296 NM_006192	199188	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	199427	+	NM_033176|NKX2-4|644524|NK2 homeobox 4##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2##BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_002509|NKX2-2|4821|NK2 homeobox 2##NM_006192|PAX1|5075|paired box 1##BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1	0.713245	CTCF.p2:-11:0.713
chr9	97431249	97431362	reg1020464.p1	7.017	+	TSC_hg19_v1_chr9_-_97402561 AK292199	-28743	-	NM_001127628 TSC_hg19_v1_chr9_-_97402546	-28767	-	TSC_hg19_v1_chr9_-_97401835 AK223395 AK316583 NM_000507	-29417	-	TSC_hg19_v1_chr9_+_97488980 NM_001193331 NM_032823 AK296782 AK057450	57657	+	BC029616 TSC_hg19_v1_chr9_+_97488999	57698	+	NM_001193329 AJ560639	90692	+	AK292199|FBP1|2203|fructose-1,6-bisphosphatase 1##NM_001127628|FBP1|2203|fructose-1,6-bisphosphatase 1##AK223395|FBP1|2203|fructose-1,6-bisphosphatase 1##AK316583|FBP1|2203|fructose-1,6-bisphosphatase 1##NM_000507|FBP1|2203|fructose-1,6-bisphosphatase 1##NM_001193331|C9orf3|84909|chromosome 9 open reading frame 3##NM_032823|C9orf3|84909|chromosome 9 open reading frame 3##AK296782|C9orf3|84909|chromosome 9 open reading frame 3##AK057450|C9orf3|84909|chromosome 9 open reading frame 3##BC029616|C9orf3|84909|chromosome 9 open reading frame 3##NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3##AJ560639|C9orf3|84909|chromosome 9 open reading frame 3	0.939223	CTCF.p2:-3:0.939
chr1	19440247	19440380	reg1021482.p1	7.016	+	TSC_hg19_v1_chr1_-_19282773 NM_001136265	-157514	-	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-211159	-	AK294552 NM_001161504	-222929	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	96433	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	137679	-	AK075563 AK291618 TSC_hg19_v1_chr1_-_19578019	137704	-	NM_001136265|IFFO2|126917|intermediate filament family orphan 2##DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090##AK075563|KIAA0090|23065|KIAA0090##AK291618|KIAA0090|23065|KIAA0090	0.876516	CTCF.p2:-9:0.877
chr12	91775944	91776094	reg1018967.p1	7.016	+	NM_001920	-199214	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-199439	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-202708	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	763624	-	AJ845165 AJ845166 NM_001025233	1041715	+	AJ845168 NM_001025232	1045904	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.652213	CTCF.p2:-30:0.652
chr4	58057173	58057283	reg1019926.p1	7.016	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-80660	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-80696	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-80829	-	TSC_hg19_v1_chr4_+_62066948 AK309793	4009747	+	NM_015236	4305610	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	7217868	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.903028	CTCF.p2:9:0.903
chr19	51409629	51409726	reg1019318.p2	7.015	+	AK300527 AK309982 BC005196 NM_001002231 NM_005551 AK309985 AK300549 AK300566 AK309973 AY429509 AY429510 AF188745 AF188746 AF188747 S39329 CU675035 AB590372 DQ890672 DQ893853 AF336106 BT006650	-32969	+	AF335477 AF335478 AX772834 AX772836 BC005307 NM_001030047 NM_001030048 NM_001030050 NM_001648 S75755 U17040 X05332 BC056665 AJ310937 AJ459784 AJ310938 AK311887 AK312933 AJ459782 AJ459783 AJ512346 M26663 DQ890670 DQ893851 AB463810 CU690730 BT019862 M21895 M21896 M21897	-51481	+	AY373373 AY373374 CU686842 CU686864 HQ258133 BC126137 BC144045 BC144046 BC144047 AF303046 BC069480 BC069507 BC069518 NM_017509 NM_138563 NM_138564	-74915	-	AF113140 AF259969 AY923170 BC069325 BC069403 BC069429 BC069489 BC096175 BC096176 BC096177 BC096178 CU686804 NM_004917	4316	-	AF168768 BC008036 AK223421 AF435980 AF435981 AY279380 AY279381 AY359010 NM_001077491 NM_001077492 NM_012427	46574	-	BC015525 AY318868 AY318869 AY318870 AY318867 NM_001012964 NM_001012965	62347	-	AK300527|KLK2|3817|kallikrein-related peptidase 2##AK309982|KLK2|3817|kallikrein-related peptidase 2##BC005196|KLK2|3817|kallikrein-related peptidase 2##NM_001002231|KLK2|3817|kallikrein-related peptidase 2##NM_005551|KLK2|3817|kallikrein-related peptidase 2##AK309985|KLK2|3817|kallikrein-related peptidase 2##AK300549|KLK2|3817|kallikrein-related peptidase 2##AK300566|KLK2|3817|kallikrein-related peptidase 2##AK309973|KLK2|3817|kallikrein-related peptidase 2##AY429509|KLK2|3817|kallikrein-related peptidase 2##AY429510|KLK2|3817|kallikrein-related peptidase 2##AF188745|KLK2|3817|kallikrein-related peptidase 2##AF188746|KLK2|3817|kallikrein-related peptidase 2##AF188747|KLK2|3817|kallikrein-related peptidase 2##S39329|KLK2|3817|kallikrein-related peptidase 2##DQ890672|KLK2|3817|kallikrein-related peptidase 2##DQ893853|KLK2|3817|kallikrein-related peptidase 2##AF336106|KLK2|3817|kallikrein-related peptidase 2##BT006650|KLK2|3817|kallikrein-related peptidase 2##AF335477|KLK3|354|kallikrein-related peptidase 3##AF335478|KLK3|354|kallikrein-related peptidase 3##AX772834|KLK3|354|kallikrein-related peptidase 3##BC005307|KLK3|354|kallikrein-related peptidase 3##NM_001030047|KLK3|354|kallikrein-related peptidase 3##NM_001030048|KLK3|354|kallikrein-related peptidase 3##NM_001030050|KLK3|354|kallikrein-related peptidase 3##NM_001648|KLK3|354|kallikrein-related peptidase 3##S75755|KLK3|354|kallikrein-related peptidase 3##U17040|KLK3|354|kallikrein-related peptidase 3##X05332|KLK3|354|kallikrein-related peptidase 3##BC056665|KLK3|354|kallikrein-related peptidase 3##AJ310937|KLK3|354|kallikrein-related peptidase 3##AJ459784|KLK3|354|kallikrein-related peptidase 3##AJ310938|KLK3|354|kallikrein-related peptidase 3##AK312933|KLK3|354|kallikrein-related peptidase 3##AJ459782|KLK3|354|kallikrein-related peptidase 3##AJ459783|KLK3|354|kallikrein-related peptidase 3##AJ512346|KLK3|354|kallikrein-related peptidase 3##M26663|KLK3|354|kallikrein-related peptidase 3##DQ890670|KLK3|354|kallikrein-related peptidase 3##DQ893851|KLK3|354|kallikrein-related peptidase 3##BT019862|KLK3|354|kallikrein-related peptidase 3##M21895|KLK3|354|kallikrein-related peptidase 3##M21896|KLK3|354|kallikrein-related peptidase 3##M21897|KLK3|354|kallikrein-related peptidase 3##AY373373|KLK15|55554|kallikrein-related peptidase 15##AY373374|KLK15|55554|kallikrein-related peptidase 15##HQ258133|KLK15|55554|kallikrein-related peptidase 15##BC126137|KLK15|55554|kallikrein-related peptidase 15##BC144045|KLK15|55554|kallikrein-related peptidase 15##BC144046|KLK15|55554|kallikrein-related peptidase 15##BC144047|KLK15|55554|kallikrein-related peptidase 15##AF303046|KLK15|55554|kallikrein-related peptidase 15##BC069480|KLK15|55554|kallikrein-related peptidase 15##BC069507|KLK15|55554|kallikrein-related peptidase 15##BC069518|KLK15|55554|kallikrein-related peptidase 15##NM_017509|KLK15|55554|kallikrein-related peptidase 15##NM_138563|KLK15|55554|kallikrein-related peptidase 15##NM_138564|KLK15|55554|kallikrein-related peptidase 15##AF113140|KLK4|9622|kallikrein-related peptidase 4##AF259969|KLK4|9622|kallikrein-related peptidase 4##AY923170|KLK4|9622|kallikrein-related peptidase 4##BC069325|KLK4|9622|kallikrein-related peptidase 4##BC069403|KLK4|9622|kallikrein-related peptidase 4##BC069429|KLK4|9622|kallikrein-related peptidase 4##BC069489|KLK4|9622|kallikrein-related peptidase 4##BC096175|KLK4|9622|kallikrein-related peptidase 4##BC096176|KLK4|9622|kallikrein-related peptidase 4##BC096177|KLK4|9622|kallikrein-related peptidase 4##BC096178|KLK4|9622|kallikrein-related peptidase 4##NM_004917|KLK4|9622|kallikrein-related peptidase 4##AF168768|KLK5|25818|kallikrein-related peptidase 5##BC008036|KLK5|25818|kallikrein-related peptidase 5##AK223421|KLK5|25818|kallikrein-related peptidase 5##AF435980|KLK5|25818|kallikrein-related peptidase 5##AF435981|KLK5|25818|kallikrein-related peptidase 5##AY279380|KLK5|25818|kallikrein-related peptidase 5##AY279381|KLK5|25818|kallikrein-related peptidase 5##AY359010|KLK5|25818|kallikrein-related peptidase 5##NM_001077491|KLK5|25818|kallikrein-related peptidase 5##NM_001077492|KLK5|25818|kallikrein-related peptidase 5##NM_012427|KLK5|25818|kallikrein-related peptidase 5##BC015525|KLK6|5653|kallikrein-related peptidase 6##AY318868|KLK6|5653|kallikrein-related peptidase 6##AY318869|KLK6|5653|kallikrein-related peptidase 6##AY318870|KLK6|5653|kallikrein-related peptidase 6##AY318867|KLK6|5653|kallikrein-related peptidase 6##NM_001012964|KLK6|5653|kallikrein-related peptidase 6##NM_001012965|KLK6|5653|kallikrein-related peptidase 6	0.997713	CTCF.p2:18:0.998
chr2	236025652	236025807	reg1020065.p1	7.015	+	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	-165071	+	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	-620010	-	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-1066342	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	377074	+	TSC_hg19_v1_chr2_+_236402950 BC140856	377248	+	TSC_hg19_v1_chr2_+_236403297 AB384114 AF413078	377581	+	BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AF413078|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.996834	CTCF.p2:9:0.997
chr8	41801783	41801897	reg1017505.p1	7.015	+	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-47530	-	AK026601 TSC_hg19_v1_chr8_+_41685847	-116015	+	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	-146700	-	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	107659	-	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	208693	+	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	263248	-	AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic##U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue	0.908575	CTCF.p2:-1:0.909
chr9	73099570	73099665	reg1017948.p1	7.015	+	D31716 S72504 NM_001206	-70062	-	AB451404 CU686806 AB464604 EU446889 TSC_hg19_v1_chr9_-_73028875 BC074879 BC074880 AK313631 BC069431	-70942	-	TSC_hg19_v1_chr9_+_72873993 AB385355 AJ310550 DQ893364 DQ896768	-225628	+	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	384343	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	636919	-	AL136545 TSC_hg19_v1_chr9_-_74061901	962266	-	D31716|KLF9|687|Kruppel-like factor 9##S72504|KLF9|687|Kruppel-like factor 9##NM_001206|KLF9|687|Kruppel-like factor 9##AB451404|KLF9|687|Kruppel-like factor 9##EU446889|KLF9|687|Kruppel-like factor 9##BC074879|KLF9|687|Kruppel-like factor 9##BC074880|KLF9|687|Kruppel-like factor 9##AK313631|KLF9|687|Kruppel-like factor 9##BC069431|KLF9|687|Kruppel-like factor 9##AJ310550|SMC5|23137|structural maintenance of chromosomes 5##DQ893364|SMC5|23137|structural maintenance of chromosomes 5##DQ896768|SMC5|23137|structural maintenance of chromosomes 5##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	0.208288	CTCF.p2:15:0.208
chr1	166853650	166853768	reg1022517.p1	7.014	+	TSC_hg19_v1_chr1_-_166845533 AK291922 NM_053053	-8116	-	AB590621 EU446601 AK290964 TSC_hg19_v1_chr1_-_166845502 BC015401 AK309250	-8211	-	TSC_hg19_v1_chr1_+_166808734 AB040946 NM_017542 AK056711 BC131624	-44964	+	AB527117 AF503509 NM_199351 TSC_hg19_v1_chr1_-_166944658	90973	-	TSC_hg19_v1_chr1_+_166944753 GU383114	91075	+	TSC_hg19_v1_chr1_+_166958503 AK302253 AK131066 DQ076156 GU383113 AK027810 NM_032858 BC028595 AB590622 CU688524	104833	+	AK291922|TADA1|117143|transcriptional adaptor 1##NM_053053|TADA1|117143|transcriptional adaptor 1##EU446601|TADA1|117143|transcriptional adaptor 1##AK290964|TADA1|117143|transcriptional adaptor 1##BC015401|TADA1|117143|transcriptional adaptor 1##AK309250|TADA1|117143|transcriptional adaptor 1##AB040946|POGK|57645|pogo transposable element with KRAB domain##NM_017542|POGK|57645|pogo transposable element with KRAB domain##AK056711|POGK|57645|pogo transposable element with KRAB domain##BC131624|POGK|57645|pogo transposable element with KRAB domain##AF503509|ILDR2|387597|immunoglobulin-like domain containing receptor 2##NM_199351|ILDR2|387597|immunoglobulin-like domain containing receptor 2##GU383114|MAEL|84944|maelstrom homolog (Drosophila)##AK302253|MAEL|84944|maelstrom homolog (Drosophila)##AK131066|MAEL|84944|maelstrom homolog (Drosophila)##DQ076156|MAEL|84944|maelstrom homolog (Drosophila)##GU383113|MAEL|84944|maelstrom homolog (Drosophila)##AK027810|MAEL|84944|maelstrom homolog (Drosophila)##NM_032858|MAEL|84944|maelstrom homolog (Drosophila)##BC028595|MAEL|84944|maelstrom homolog (Drosophila)	0.814265	CTCF.p2:14:0.814
chr12	50526402	50526582	reg1020631.p1	7.014	+	TSC_hg19_v1_chr12_+_50506018 BC007849 NM_032901 AK312180	-20576	+	AK130162 TSC_hg19_v1_chr12_+_50497790 BC032234 NM_005276 AK295911 L34041 AK312516 DQ890626 DQ893793 CU689308	-28681	+	TSC_hg19_v1_chr12_+_50479124 AK292700 AK293932 AK130517 AB527887 CU679327 EU447009 BC000063 AF109733	-47379	+	AB527479 TSC_hg19_v1_chr12_-_50561095 AK294521 BC014637 AK300937 NM_147190 BC033558	34599	-	TSC_hg19_v1_chr12_-_50561112 AK026014	34633	-	TSC_hg19_v1_chr12_-_50561153 AK298924	34733	-	BC007849|C12orf62|84987|chromosome 12 open reading frame 62##NM_032901|C12orf62|84987|chromosome 12 open reading frame 62##AK312180|C12orf62|84987|chromosome 12 open reading frame 62##AK130162|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##BC032234|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##NM_005276|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##AK295911|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##L34041|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##AK312516|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##DQ890626|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##DQ893793|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK294521|CERS5|91012|ceramide synthase 5##BC014637|CERS5|91012|ceramide synthase 5##AK300937|CERS5|91012|ceramide synthase 5##NM_147190|CERS5|91012|ceramide synthase 5##BC033558|CERS5|91012|ceramide synthase 5##AK026014|CERS5|91012|ceramide synthase 5##AK298924|CERS5|91012|ceramide synthase 5	0.997352	CTCF.p2:2:0.997
chr12	70796528	70796594	reg1022111.p1	7.014	+	TSC_hg19_v1_chr12_+_70760230 NM_014505 AF160967 BC042446 BC050621 AF215891 AF207992	-36295	+	AK307479 NM_001199303 AK095789	-159050	+	AK000662 TSC_hg19_v1_chr12_+_70637212 AF044215 BC011826 BC002597 AF161480	-159326	+	TSC_hg19_v1_chr12_+_70861858 BC031864	65307	+	BC101679 BC113463 BC143356 BC143360 NM_001206971 NM_001206972 NM_002837 X54131	207061	-	AB587339 TSC_hg19_v1_chr12_-_71031179 AK128562 BC051329 BX647238 CR749546 BX648245 AK126121 NM_001109754	234635	-	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AK307479|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##NM_001199303|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK095789|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK000662|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AF044215|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##BC011826|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##BC002597|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AF161480|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206971|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206972|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##AK128562|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC051329|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX647238|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##CR749546|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX648245|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##AK126121|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001109754|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	0.245524	CTCF.p2:15:0.246
chr12	98910281	98910405	reg1022802.p1	7.014	+	TSC_hg19_v1_chr12_+_98909434 AK315221 U09086 S76736	-901	+	TSC_hg19_v1_chr12_+_98909412 AB209297	-932	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	-936	+	TSC_hg19_v1_chr12_+_98987424 NM_002635 NM_005888 NM_213611 AK092689 BX647062	77070	+	AK074759 AK222658 AK316598 TSC_hg19_v1_chr12_+_98987463	77120	+	TSC_hg19_v1_chr12_+_98987497 BC001328 BC068067 BC006455 BC011641 X60036 BC051367 AB064666 BC004345 BC011574 BC000998 BC003504	77140	+	AK315221|TMPO|7112|thymopoietin##U09086|TMPO|7112|thymopoietin##S76736|TMPO|7112|thymopoietin##AB209297|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin##NM_002635|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##NM_005888|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##NM_213611|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AK092689|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BX647062|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AK074759|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AK222658|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AK316598|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC001328|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC068067|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC006455|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC011641|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##X60036|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC051367|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AB064666|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC004345|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC011574|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC000998|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC003504|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3	0.232613	CTCF.p2:19:0.233
chrX	131205408	131205537	reg1019929.p2	7.014	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	-47832	+	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	-48151	+	TSC_hg19_v1_chrX_-_130964633 AK097911	-240821	-	FJ717411 BC114371 AK125336 NM_194277	56488	-	EU832115 EU832161 EU832209 EU832255 TSC_hg19_v1_chrX_-_131351340 AL049685 BC003403 AK124801 BX647223 AL832461	145990	-	TSC_hg19_v1_chrX_-_131352063 BC051467 AY298955 NM_021183	146588	-	AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##FJ717411|FRMD7|90167|FERM domain containing 7##BC114371|FRMD7|90167|FERM domain containing 7##AK125336|FRMD7|90167|FERM domain containing 7##NM_194277|FRMD7|90167|FERM domain containing 7##EU832115|RAP2C|57826|RAP2C, member of RAS oncogene family##EU832161|RAP2C|57826|RAP2C, member of RAS oncogene family##EU832209|RAP2C|57826|RAP2C, member of RAS oncogene family##EU832255|RAP2C|57826|RAP2C, member of RAS oncogene family##AL049685|RAP2C|57826|RAP2C, member of RAS oncogene family##BC003403|RAP2C|57826|RAP2C, member of RAS oncogene family##AK124801|RAP2C|57826|RAP2C, member of RAS oncogene family##BX647223|RAP2C|57826|RAP2C, member of RAS oncogene family##AL832461|RAP2C|57826|RAP2C, member of RAS oncogene family##BC051467|RAP2C|57826|RAP2C, member of RAS oncogene family##AY298955|RAP2C|57826|RAP2C, member of RAS oncogene family##NM_021183|RAP2C|57826|RAP2C, member of RAS oncogene family	0.247235	CTCF.p2:5:0.247
chr11	36514366	36514490	reg1019533.p1	7.013	+	NM_001160169	-91882	+	NM_001160168 NM_024841 BX640959 AK024275	-116868	+	NM_001160167 AK055042	-196648	+	TSC_hg19_v1_chr11_-_36531820 U78798 BC031052 AK292978 NM_004620 NM_145803	17386	-	NM_000448 M29474	75140	+	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	101676	+	NM_001160169|PRR5L|79899|proline rich 5 like##NM_001160168|PRR5L|79899|proline rich 5 like##NM_024841|PRR5L|79899|proline rich 5 like##BX640959|PRR5L|79899|proline rich 5 like##AK024275|PRR5L|79899|proline rich 5 like##NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like##U78798|TRAF6|7189|TNF receptor-associated factor 6##BC031052|TRAF6|7189|TNF receptor-associated factor 6##AK292978|TRAF6|7189|TNF receptor-associated factor 6##NM_004620|TRAF6|7189|TNF receptor-associated factor 6##NM_145803|TRAF6|7189|TNF receptor-associated factor 6##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74	0.991092	CTCF.p2:26:0.991
chr16	49910701	49910797	reg1018938.p1	7.013	+	NM_015069	-49832	-	BC021181 BC021718 NM_144602 CU676858	-502921	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-595015	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	148391	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	189144	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	189211	+	NM_015069|ZNF423|23090|zinc finger protein 423##BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3	0.360122	CTCF.p2:3:0.360
chr17	46212611	46212759	reg1022452.p1	7.013	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-27533	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-27700	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-33864	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	294853	-	TSC_hg19_v1_chr17_-_46507604 BC039040	294932	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	395586	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.957903	CTCF.p2:-14:0.958
chr20	3696988	3697135	reg1022655.p1	7.013	+	AF230073 BC141884 NM_023068	-9287	-	AY223855 AY223851 AY223850 AK095953 AK126498 AK304037 AF466287 AK123015 AK226148 BC125112 BC125113 AK300429 AY223853 AF466289 AB055891 AY223852 AY223854 NM_025220 NM_153202 AY358314 BC062663	-34301	-	AF253318 AJ291673 AJ291674 AJ291675 NM_022139 NM_145762 BC172271 BC172567	-53011	-	NM_001197327 NM_052970 AK297120 TSC_hg19_v1_chr20_+_3713341 AK301294 BC090857 BC110881 AK056712 BC117284 BC126263 BC143932	16306	+	TSC_hg19_v1_chr20_-_3748383 BC012196 AK124341 BC024036 AK000557 AK024220 AK225109 AK308520 BC069204 NM_001039140	51348	-	BC022476 AL080154 EF560745 NM_015417 AK313766	65025	-	AF230073|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##BC141884|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##NM_023068|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##AY223855|ADAM33|80332|ADAM metallopeptidase domain 33##AY223851|ADAM33|80332|ADAM metallopeptidase domain 33##AY223850|ADAM33|80332|ADAM metallopeptidase domain 33##AK095953|ADAM33|80332|ADAM metallopeptidase domain 33##AK126498|ADAM33|80332|ADAM metallopeptidase domain 33##AK304037|ADAM33|80332|ADAM metallopeptidase domain 33##AF466287|ADAM33|80332|ADAM metallopeptidase domain 33##AK123015|ADAM33|80332|ADAM metallopeptidase domain 33##AK226148|ADAM33|80332|ADAM metallopeptidase domain 33##BC125112|ADAM33|80332|ADAM metallopeptidase domain 33##BC125113|ADAM33|80332|ADAM metallopeptidase domain 33##AK300429|ADAM33|80332|ADAM metallopeptidase domain 33##AY223853|ADAM33|80332|ADAM metallopeptidase domain 33##AF466289|ADAM33|80332|ADAM metallopeptidase domain 33##AB055891|ADAM33|80332|ADAM metallopeptidase domain 33##AY223852|ADAM33|80332|ADAM metallopeptidase domain 33##AY223854|ADAM33|80332|ADAM metallopeptidase domain 33##NM_025220|ADAM33|80332|ADAM metallopeptidase domain 33##NM_153202|ADAM33|80332|ADAM metallopeptidase domain 33##AY358314|ADAM33|80332|ADAM metallopeptidase domain 33##BC062663|ADAM33|80332|ADAM metallopeptidase domain 33##AF253318|GFRA4|64096|GDNF family receptor alpha 4##AJ291673|GFRA4|64096|GDNF family receptor alpha 4##AJ291674|GFRA4|64096|GDNF family receptor alpha 4##AJ291675|GFRA4|64096|GDNF family receptor alpha 4##NM_022139|GFRA4|64096|GDNF family receptor alpha 4##NM_145762|GFRA4|64096|GDNF family receptor alpha 4##BC172271|GFRA4|64096|GDNF family receptor alpha 4##BC172567|GFRA4|64096|GDNF family receptor alpha 4##NM_001197327|HSPA12B|116835|heat shock 70kD protein 12B##NM_052970|HSPA12B|116835|heat shock 70kD protein 12B##AK297120|HSPA12B|116835|heat shock 70kD protein 12B##AK301294|HSPA12B|116835|heat shock 70kD protein 12B##BC090857|HSPA12B|116835|heat shock 70kD protein 12B##BC110881|HSPA12B|116835|heat shock 70kD protein 12B##AK056712|HSPA12B|116835|heat shock 70kD protein 12B##BC117284|HSPA12B|116835|heat shock 70kD protein 12B##BC126263|HSPA12B|116835|heat shock 70kD protein 12B##BC143932|HSPA12B|116835|heat shock 70kD protein 12B##BC012196|C20orf27|54976|chromosome 20 open reading frame 27##AK124341|C20orf27|54976|chromosome 20 open reading frame 27##BC024036|C20orf27|54976|chromosome 20 open reading frame 27##AK000557|C20orf27|54976|chromosome 20 open reading frame 27##AK024220|C20orf27|54976|chromosome 20 open reading frame 27##AK225109|C20orf27|54976|chromosome 20 open reading frame 27##AK308520|C20orf27|54976|chromosome 20 open reading frame 27##BC069204|C20orf27|54976|chromosome 20 open reading frame 27##NM_001039140|C20orf27|54976|chromosome 20 open reading frame 27##BC022476|SPEF1|25876|sperm flagellar 1##AL080154|SPEF1|25876|sperm flagellar 1##EF560745|SPEF1|25876|sperm flagellar 1##NM_015417|SPEF1|25876|sperm flagellar 1##AK313766|SPEF1|25876|sperm flagellar 1	0.332958	CTCF.p2:0:0.333
chr22	50982744	50982873	reg1021382.p1	7.013	+	NM_001014440	-11801	-	BC127934 BC127935 TSC_hg19_v1_chr22_-_50970579	-12243	-	TSC_hg19_v1_chr22_-_50968479 NM_001113755 NM_001953	-14312	-	BC009980 NM_138433	3653	+	NM_001123225	18519	-	BC143071 BC150318 D87812 U62733 BC142954 NM_001145137	33616	-	NM_001014440|ODF3B|440836|outer dense fiber of sperm tails 3B##BC127934|ODF3B|440836|outer dense fiber of sperm tails 3B##BC127935|ODF3B|440836|outer dense fiber of sperm tails 3B##NM_001113755|TYMP|1890|thymidine phosphorylase##NM_001953|TYMP|1890|thymidine phosphorylase##BC009980|KLHDC7B|113730|kelch domain containing 7B##NM_138433|KLHDC7B|113730|kelch domain containing 7B##NM_001123225|SYCE3|644186|synaptonemal complex central element protein 3##BC143071|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##BC150318|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##D87812|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##U62733|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##BC142954|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##NM_001145137|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	0.0	
chr3	44118876	44118976	reg1015451.p2	7.013	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-386505	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-455413	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-455488	-	AK093476 AX748152 NM_001145030	164451	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	260704	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	261021	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.468018	CTCF.p2:7:0.468
chrX	77348011	77348162	reg1015185.p2	7.013	+	NM_001029891 AB528771	-122950	-	AB117973 TSC_hg19_v1_chrX_+_77166237 AK096667 AB208828	-181844	+	TSC_hg19_v1_chrX_+_77166193 AK310748 NM_000052 L06133	-181893	+	NM_000291 TSC_hg19_v1_chrX_+_77359707	11601	+	TSC_hg19_v1_chrX_+_77359742 AK301632 AK303848 AK291081 AK295014 AK295182 AK298855 AK310756 AK312280 BC103752 D28371	11645	+	TSC_hg19_v1_chrX_+_77359756 V00572	11670	+	NM_001029891|PGAM4|441531|phosphoglycerate mutase family member 4##AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##NM_000291|PGK1|5230|phosphoglycerate kinase 1##AK301632|PGK1|5230|phosphoglycerate kinase 1##AK303848|PGK1|5230|phosphoglycerate kinase 1##AK291081|PGK1|5230|phosphoglycerate kinase 1##AK295014|PGK1|5230|phosphoglycerate kinase 1##AK295182|PGK1|5230|phosphoglycerate kinase 1##AK298855|PGK1|5230|phosphoglycerate kinase 1##AK310756|PGK1|5230|phosphoglycerate kinase 1##AK312280|PGK1|5230|phosphoglycerate kinase 1##BC103752|PGK1|5230|phosphoglycerate kinase 1##D28371|PGK1|5230|phosphoglycerate kinase 1##V00572|PGK1|5230|phosphoglycerate kinase 1	0.719063	CTCF.p2:11:0.719
chr18	74587440	74587567	reg1019133.p2	7.012	+	AF085243 AF085244 NM_007345	-51388	+	TSC_hg19_v1_chr18_+_74534512 BX648028	-52993	+	TSC_hg19_v1_chr18_-_74534239 BC032908	-53264	-	BC130034 TSC_hg19_v1_chr18_-_74692098	104527	-	AK074315 TSC_hg19_v1_chr18_-_74728814	141253	-	CR536534 CR541919 TSC_hg19_v1_chr18_-_74729012 AK296492 M30515 M30516 BC008749 BC101771 BC101773 BC143348 BC143350 M30047 BC080654 M13577 AK289893 AK098402 AK128788 CR627018 AK128770 BC068550	141492	-	AF085243|ZNF236|7776|zinc finger protein 236##AF085244|ZNF236|7776|zinc finger protein 236##NM_007345|ZNF236|7776|zinc finger protein 236##BX648028|ZNF236|7776|zinc finger protein 236##BC032908|LOC100131655|100131655|uncharacterized LOC100131655##BC130034|MBP|4155|myelin basic protein##AK074315|MBP|4155|myelin basic protein##CR536534|MBP|4155|myelin basic protein##CR541919|MBP|4155|myelin basic protein##M30515|MBP|4155|myelin basic protein##M30516|MBP|4155|myelin basic protein##BC008749|MBP|4155|myelin basic protein##BC101771|MBP|4155|myelin basic protein##BC101773|MBP|4155|myelin basic protein##BC143348|MBP|4155|myelin basic protein##BC143350|MBP|4155|myelin basic protein##M30047|MBP|4155|myelin basic protein##BC080654|MBP|4155|myelin basic protein##M13577|MBP|4155|myelin basic protein##AK289893|MBP|4155|myelin basic protein##AK098402|MBP|4155|myelin basic protein##AK128788|MBP|4155|myelin basic protein##CR627018|MBP|4155|myelin basic protein##AK128770|MBP|4155|myelin basic protein##BC068550|MBP|4155|myelin basic protein	0.998476	CTCF.p2:-6:0.998
chr3	90231791	90231930	reg1020334.p1	7.012	+	M83941 AF213460 BC026247 TSC_hg19_v1_chr3_+_89156840 AK291411 AB384708	-1075010	+	AF213459 NM_005233 NM_182644 BC063282 TSC_hg19_v1_chr3_+_89156770	-1075139	+	AL832398 NM_173824 TSC_hg19_v1_chr3_+_88199126 BC024188 AK297719 AK313547	-2032832	+	AB590252 DQ892389 DQ895602 TSC_hg19_v1_chr3_-_93692741 Y00692 AK292994	3460816	-	TSC_hg19_v1_chr3_-_93692932 BC015801 NM_000313	3461058	-	TSC_hg19_v1_chr3_+_93698998 BC073842 NM_001174150 NM_001174151 NM_144996 NM_182896 CR936753 BC094725 BC104033 BC104034 BC104035 BC104036 AK299284 BC031093 AK296994 BC062993 BC015439 CR936763 AL713789 CR936756	3467167	+	M83941|EPHA3|2042|EPH receptor A3##AF213460|EPHA3|2042|EPH receptor A3##BC026247|EPHA3|2042|EPH receptor A3##AK291411|EPHA3|2042|EPH receptor A3##AF213459|EPHA3|2042|EPH receptor A3##NM_005233|EPHA3|2042|EPH receptor A3##NM_182644|EPHA3|2042|EPH receptor A3##BC063282|EPHA3|2042|EPH receptor A3##AL832398|C3orf38|285237|chromosome 3 open reading frame 38##NM_173824|C3orf38|285237|chromosome 3 open reading frame 38##BC024188|C3orf38|285237|chromosome 3 open reading frame 38##AK297719|C3orf38|285237|chromosome 3 open reading frame 38##AK313547|C3orf38|285237|chromosome 3 open reading frame 38##DQ892389|PROS1|5627|protein S (alpha)##DQ895602|PROS1|5627|protein S (alpha)##Y00692|PROS1|5627|protein S (alpha)##AK292994|PROS1|5627|protein S (alpha)##BC015801|PROS1|5627|protein S (alpha)##NM_000313|PROS1|5627|protein S (alpha)##BC073842|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174150|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174151|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_144996|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_182896|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936753|ARL13B|200894|ADP-ribosylation factor-like 13B##BC094725|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104033|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104034|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104035|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104036|ARL13B|200894|ADP-ribosylation factor-like 13B##AK299284|ARL13B|200894|ADP-ribosylation factor-like 13B##BC031093|ARL13B|200894|ADP-ribosylation factor-like 13B##AK296994|ARL13B|200894|ADP-ribosylation factor-like 13B##BC062993|ARL13B|200894|ADP-ribosylation factor-like 13B##BC015439|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936763|ARL13B|200894|ADP-ribosylation factor-like 13B##AL713789|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936756|ARL13B|200894|ADP-ribosylation factor-like 13B	0.785322	CTCF.p2:14:0.785
chrX	118650525	118650625	reg1000627.p2	7.012	+	TSC_hg19_v1_chrX_+_118602407 BC068199 J02683 BC056160 CU691128	-48141	+	NM_001152 TSC_hg19_v1_chrX_+_118602390 AK315292	-48199	+	TSC_hg19_v1_chrX_+_118533353 AK091304 AK303932 AX746905 AK292035 CU676444 AL590525	-117169	+	CU692786 TSC_hg19_v1_chrX_-_118699348 AK096297 BC023506 AK026618 AK298877 NM_001170569	48769	-	TSC_hg19_v1_chrX_-_118699373 NM_001170570 NM_022101	48809	-	TSC_hg19_v1_chrX_+_118708527 AK301675 NM_003336 NM_181762 D28459 AK313092 AK223045 AK297696 AK223064	57930	+	BC068199|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##J02683|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##BC056160|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##NM_001152|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##AK315292|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##AK091304|SLC25A43|203427|solute carrier family 25, member 43##AK303932|SLC25A43|203427|solute carrier family 25, member 43##AK292035|SLC25A43|203427|solute carrier family 25, member 43##AL590525|SLC25A43|203427|solute carrier family 25, member 43##AK096297|CXorf56|63932|chromosome X open reading frame 56##BC023506|CXorf56|63932|chromosome X open reading frame 56##AK026618|CXorf56|63932|chromosome X open reading frame 56##AK298877|CXorf56|63932|chromosome X open reading frame 56##NM_001170569|CXorf56|63932|chromosome X open reading frame 56##NM_001170570|CXorf56|63932|chromosome X open reading frame 56##NM_022101|CXorf56|63932|chromosome X open reading frame 56##AK301675|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_003336|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181762|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D28459|UBE2A|7319|ubiquitin-conjugating enzyme E2A##AK313092|UBE2A|7319|ubiquitin-conjugating enzyme E2A##AK223045|UBE2A|7319|ubiquitin-conjugating enzyme E2A##AK297696|UBE2A|7319|ubiquitin-conjugating enzyme E2A##AK223064|UBE2A|7319|ubiquitin-conjugating enzyme E2A	0.0	
chr20	1450815	1450974	reg1023483.p1	7.011	+	AK093845 NM_001206736 NM_016143 NM_018839	-2558	-	TSC_hg19_v1_chr20_-_1447590 BC002801	-3287	-	TSC_hg19_v1_chr20_-_1447490 AB590363 CU678204 DQ893189 DQ896513 AK001511 AF078856 AF086909 AF112211 AK223334 AK297403 AK315433 AF283774 AK223341	-3417	-	AY424277 AK095499 AK294440 TSC_hg19_v1_chr20_-_1472067	21141	-	AK297072 TSC_hg19_v1_chr20_-_1472142	21240	-	AK097113 TSC_hg19_v1_chr20_-_1472172 NM_001122962 NM_001134836	21306	-	AK093845|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_001206736|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_016143|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_018839|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##BC002801|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##DQ893189|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##DQ896513|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK001511|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF078856|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF086909|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF112211|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223334|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK297403|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK315433|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF283774|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223341|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AY424277|SIRPB2|284759|signal-regulatory protein beta 2##AK095499|SIRPB2|284759|signal-regulatory protein beta 2##AK294440|SIRPB2|284759|signal-regulatory protein beta 2##AK297072|SIRPB2|284759|signal-regulatory protein beta 2##NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2##NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2	0.93765	CTCF.p2:-14:0.938
chr4	191032487	191032598	reg1019983.p1	7.011	+	NM_033178 NM_001127386 NM_001127388 NM_001127389 NM_001164467 NM_001177376 NM_012147	-20645	+	NM_001127386 NM_001127388 NM_001127389 NM_001164467 NM_012147	-23942	+	NM_033178 NM_001127386 NM_001127388 NM_001127389 NM_001164467 NM_001177376 NM_012147	-27238	+	None	None	None	None	None	None	None	None	None	NM_033178|DUX4|22947|double homeobox 4##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_001177376|DUX4L4|441056|double homeobox 4 like 4##NM_012147|DUX2|26583|double homeobox 2##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_012147|DUX2|26583|double homeobox 2##NM_033178|DUX4|22947|double homeobox 4##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_001177376|DUX4L4|441056|double homeobox 4 like 4##NM_012147|DUX2|26583|double homeobox 2	0.0	
chr6	71019930	71020048	reg1021669.p1	7.011	+	X54412 BC015409 TSC_hg19_v1_chr6_-_71012827 NM_001851	-7189	-	X54413 BC008620 BC063646 NM_078485	-27157	-	AK309023 TSC_hg19_v1_chr6_+_70577418	-442627	+	TSC_hg19_v1_chr6_+_71123122 NM_001105531 NM_020819	103124	+	TSC_hg19_v1_chr6_+_71123224 CR749254 BC131782	103225	+	NM_001162529 AB037832	116168	+	X54412|COL9A1|1297|collagen, type IX, alpha 1##BC015409|COL9A1|1297|collagen, type IX, alpha 1##NM_001851|COL9A1|1297|collagen, type IX, alpha 1##X54413|COL9A1|1297|collagen, type IX, alpha 1##BC008620|COL9A1|1297|collagen, type IX, alpha 1##BC063646|COL9A1|1297|collagen, type IX, alpha 1##NM_078485|COL9A1|1297|collagen, type IX, alpha 1##NM_001105531|FAM135A|57579|family with sequence similarity 135, member A##NM_020819|FAM135A|57579|family with sequence similarity 135, member A##CR749254|FAM135A|57579|family with sequence similarity 135, member A##BC131782|FAM135A|57579|family with sequence similarity 135, member A##NM_001162529|FAM135A|57579|family with sequence similarity 135, member A##AB037832|FAM135A|57579|family with sequence similarity 135, member A	0.833381	CTCF.p2:-21:0.833
chr8	131840714	131840855	reg1023057.p1	7.011	+	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	-384753	-	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-811901	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-812090	-	NM_001115	212050	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1075573	+	TSC_hg19_v1_chr8_+_132916379 BC108667	1075593	+	NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC108667|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.996387	CTCF.p2:1:0.996
chr11	57226242	57226414	reg1018963.p1	7.010	+	NM_017611	-31276	-	TSC_hg19_v1_chr11_-_57194592 AK075552 AK298028 AK315839 NM_199329	-31736	-	TSC_hg19_v1_chr11_-_57194589 AK311401	-31741	-	TSC_hg19_v1_chr11_+_57228149 BC113673 BC117276 BC143818 AF532858 AX751514 AY250221 DQ864979 NM_178570	1904	+	AF045584 TSC_hg19_v1_chr11_-_57282334 BC001639 NM_001198810	56008	-	TSC_hg19_v1_chr11_-_57283184 AB103033 NM_003627	56844	-	NM_017611|SLC43A3|29015|solute carrier family 43, member 3##AK075552|SLC43A3|29015|solute carrier family 43, member 3##AK298028|SLC43A3|29015|solute carrier family 43, member 3##AK315839|SLC43A3|29015|solute carrier family 43, member 3##NM_199329|SLC43A3|29015|solute carrier family 43, member 3##AK311401|SLC43A3|29015|solute carrier family 43, member 3##BC113673|RTN4RL2|349667|reticulon 4 receptor-like 2##BC117276|RTN4RL2|349667|reticulon 4 receptor-like 2##BC143818|RTN4RL2|349667|reticulon 4 receptor-like 2##AF532858|RTN4RL2|349667|reticulon 4 receptor-like 2##AX751514|RTN4RL2|349667|reticulon 4 receptor-like 2##AY250221|RTN4RL2|349667|reticulon 4 receptor-like 2##DQ864979|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_178570|RTN4RL2|349667|reticulon 4 receptor-like 2##AF045584|SLC43A1|8501|solute carrier family 43, member 1##BC001639|SLC43A1|8501|solute carrier family 43, member 1##NM_001198810|SLC43A1|8501|solute carrier family 43, member 1##AB103033|SLC43A1|8501|solute carrier family 43, member 1##NM_003627|SLC43A1|8501|solute carrier family 43, member 1	0.997782	CTCF.p2:-1:0.998
chr1	209921315	209921425	reg1007183.p2	7.010	+	NM_005525 TSC_hg19_v1_chr1_+_209878192 BC012593 AK313973 AB590223 DQ892912 EU176721	-43159	+	NM_001206741 NM_181755	-61846	+	TSC_hg19_v1_chr1_+_209848994 BT007101 CR542179 CR542193 DQ894610 EU176279	-72359	+	TSC_hg19_v1_chr1_+_209929480 AK122792 NM_025228 BX648450 BC110302 AK300555 AK312755 AK225762 AL049667	8080	+	TSC_hg19_v1_chr1_+_209941909 AK126139	20546	+	TSC_hg19_v1_chr1_-_209957872 BC039719 NM_152485 AK057807	36517	-	NM_005525|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##BC012593|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##AK313973|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##DQ892912|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##EU176721|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##NM_001206741|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##NM_181755|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##BT007101|G0S2|50486|G0/G1switch 2##CR542179|G0S2|50486|G0/G1switch 2##CR542193|G0S2|50486|G0/G1switch 2##DQ894610|G0S2|50486|G0/G1switch 2##EU176279|G0S2|50486|G0/G1switch 2##AK122792|TRAF3IP3|80342|TRAF3 interacting protein 3##NM_025228|TRAF3IP3|80342|TRAF3 interacting protein 3##BX648450|TRAF3IP3|80342|TRAF3 interacting protein 3##BC110302|TRAF3IP3|80342|TRAF3 interacting protein 3##AK300555|TRAF3IP3|80342|TRAF3 interacting protein 3##AK312755|TRAF3IP3|80342|TRAF3 interacting protein 3##AK225762|TRAF3IP3|80342|TRAF3 interacting protein 3##AL049667|TRAF3IP3|80342|TRAF3 interacting protein 3##AK126139|TRAF3IP3|80342|TRAF3 interacting protein 3##BC039719|C1orf74|148304|chromosome 1 open reading frame 74##NM_152485|C1orf74|148304|chromosome 1 open reading frame 74##AK057807|C1orf74|148304|chromosome 1 open reading frame 74	0.192765	
chr6	137424245	137424426	reg1020271.p2	7.010	+	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	-58090	-	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	-58497	-	AK316095 BC087842 NM_001008783 AK295424	-180882	+	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	70416	-	TSC_hg19_v1_chr6_-_137540496 BT006814 AB527981 CU675119 AF056979 AK294252	116133	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	116177	-	AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2##BT006814|IFNGR1|3459|interferon gamma receptor 1##AF056979|IFNGR1|3459|interferon gamma receptor 1##AK294252|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1	0.0	
chr6	159572429	159572566	reg1019347.p1	7.010	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-106396	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-151276	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	-151678	-	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	17933	+	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	541753	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	541865	-	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial	0.997247	CTCF.p2:0:0.997
chr5	180470398	180470507	reg1020869.p2	7.008	+	AK298113 TSC_hg19_v1_chr5_+_180467271 BC062459	-3137	+	NM_152547 TSC_hg19_v1_chr5_+_180467233 AK057097 AY358358	-3215	+	NM_197975 AK025267 AY358385 BC100800 BC100801 BC100802	-54551	+	NM_206880	111490	+	AF396655 NM_203297	157477	-	AF396652 AF396653 NM_203294 NM_203295 NM_203296	160887	-	AK298113|BTNL9|153579|butyrophilin-like 9##BC062459|BTNL9|153579|butyrophilin-like 9##NM_152547|BTNL9|153579|butyrophilin-like 9##AK057097|BTNL9|153579|butyrophilin-like 9##AY358358|BTNL9|153579|butyrophilin-like 9##NM_197975|BTNL3|10917|butyrophilin-like 3##AK025267|BTNL3|10917|butyrophilin-like 3##AY358385|BTNL3|10917|butyrophilin-like 3##BC100800|BTNL3|10917|butyrophilin-like 3##BC100801|BTNL3|10917|butyrophilin-like 3##BC100802|BTNL3|10917|butyrophilin-like 3##NM_206880|OR2V2|285659|olfactory receptor, family 2, subfamily V, member 2##AF396655|TRIM7|81786|tripartite motif containing 7##NM_203297|TRIM7|81786|tripartite motif containing 7##AF396652|TRIM7|81786|tripartite motif containing 7##AF396653|TRIM7|81786|tripartite motif containing 7##NM_203294|TRIM7|81786|tripartite motif containing 7##NM_203295|TRIM7|81786|tripartite motif containing 7##NM_203296|TRIM7|81786|tripartite motif containing 7	0.944961	CTCF.p2:-14:0.945
chr9	70709586	70709709	reg1022745.p1	7.008	+	TSC_hg19_v1_chr9_-_70490188 NM_001024916 NM_201453	-219471	-	BC141856 TSC_hg19_v1_chr9_-_70490153 BC067803 AK292585	-219497	-	AK293173 TSC_hg19_v1_chr9_-_70490138	-219507	-	NM_201453 AK293173 AY344633 AK297912 BC069006 BC082271 AF265442 CU688346	147245	+	AY344641 AY344642 NM_199135 BC137365 BC137366 EU446685 BC103887	208177	+	BC033073 NM_021965	262167	+	NM_001024916|CBWD5|220869|COBW domain containing 5##NM_201453|CBWD3|445571|COBW domain containing 3##BC141856|CBWD5|220869|COBW domain containing 5##BC067803|CBWD5|220869|COBW domain containing 5##AK292585|CBWD5|220869|COBW domain containing 5##AK293173|CBWD6|644019|COBW domain containing 6##NM_201453|CBWD3|445571|COBW domain containing 3##AK293173|CBWD6|644019|COBW domain containing 6##AY344633|CBWD3|445571|COBW domain containing 3##AK297912|CBWD3|445571|COBW domain containing 3##BC069006|CBWD6|644019|COBW domain containing 6##BC082271|CBWD5|220869|COBW domain containing 5##AF265442|CBWD5|220869|COBW domain containing 5##AY344641|FOXD4L3|286380|forkhead box D4-like 3##AY344642|FOXD4L3|286380|forkhead box D4-like 3##NM_199135|FOXD4L3|286380|forkhead box D4-like 3##BC137365|FOXD4L6|653404|forkhead box D4-like 6##BC137366|FOXD4L6|653404|forkhead box D4-like 6##EU446685|FOXD4L6|653404|forkhead box D4-like 6##BC103887|FOXD4L6|653404|forkhead box D4-like 6##BC033073|PGM5|5239|phosphoglucomutase 5##NM_021965|PGM5|5239|phosphoglucomutase 5	0.991931	CTCF.p2:13:0.992
chr11	114211090	114211199	reg1015980.p2	7.007	+	TSC_hg19_v1_chr11_+_114167214 AB590349 CR541907 DQ892841 DQ896088	-43907	+	AK026845 TSC_hg19_v1_chr11_+_114167171 U08021	-43972	+	NM_006169	-44610	+	CR457222 CU687142 BC071695 NM_019021 TSC_hg19_v1_chr11_-_114271225 BC009041 AK000017	60030	-	AK312619 TSC_hg19_v1_chr11_+_114271350 AK002015 AB209753 AK225667	60187	+	AF156098 TSC_hg19_v1_chr11_+_114271387 BC034381 NM_016090 AK225615 BC013320 BC070262 AB464181 CU689870	60258	+	CR541907|NNMT|4837|nicotinamide N-methyltransferase##DQ892841|NNMT|4837|nicotinamide N-methyltransferase##DQ896088|NNMT|4837|nicotinamide N-methyltransferase##AK026845|NNMT|4837|nicotinamide N-methyltransferase##U08021|NNMT|4837|nicotinamide N-methyltransferase##NM_006169|NNMT|4837|nicotinamide N-methyltransferase##CR457222|C11orf71|54494|chromosome 11 open reading frame 71##BC071695|C11orf71|54494|chromosome 11 open reading frame 71##NM_019021|C11orf71|54494|chromosome 11 open reading frame 71##BC009041|C11orf71|54494|chromosome 11 open reading frame 71##AK000017|C11orf71|54494|chromosome 11 open reading frame 71##AK312619|RBM7|10179|RNA binding motif protein 7##AK002015|RBM7|10179|RNA binding motif protein 7##AB209753|RBM7|10179|RNA binding motif protein 7##AK225667|RBM7|10179|RNA binding motif protein 7##AF156098|RBM7|10179|RNA binding motif protein 7##BC034381|RBM7|10179|RNA binding motif protein 7##NM_016090|RBM7|10179|RNA binding motif protein 7##AK225615|RBM7|10179|RNA binding motif protein 7##BC013320|RBM7|10179|RNA binding motif protein 7##BC070262|RBM7|10179|RNA binding motif protein 7	0.987076	CTCF.p2:-15:0.987
chr7	25935035	25935214	reg1019619.p1	7.007	+	AB040290 AF330057 AF440392 NM_022150	-667044	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-715253	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-770184	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	256809	+	TSC_hg19_v1_chr7_-_26232151 BX538099	297027	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	305217	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.75148	CTCF.p2:29:0.751
chr11	124285375	124285477	reg1018899.p1	7.006	+	NM_001005467	-18180	-	NM_001005468	-32188	-	AF162668 NM_001002918 BC137043 BC137045	-95289	-	NM_001005196 BC136865 BC136866	9351	-	AF238488 HQ258145 NM_012378 BC130393 BC130419	25590	-	NM_001005195 BC136863 BC136864	128135	-	NM_001005467|OR8B3|390271|olfactory receptor, family 8, subfamily B, member 3##NM_001005468|OR8B2|26595|olfactory receptor, family 8, subfamily B, member 2##AF162668|OR8D2|283160|olfactory receptor, family 8, subfamily D, member 2##NM_001002918|OR8D2|283160|olfactory receptor, family 8, subfamily D, member 2##BC137043|OR8D2|283160|olfactory receptor, family 8, subfamily D, member 2##BC137045|OR8D2|283160|olfactory receptor, family 8, subfamily D, member 2##NM_001005196|OR8B4|283162|olfactory receptor, family 8, subfamily B, member 4##BC136865|OR8B4|283162|olfactory receptor, family 8, subfamily B, member 4##BC136866|OR8B4|283162|olfactory receptor, family 8, subfamily B, member 4##AF238488|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##HQ258145|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##NM_012378|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##BC130393|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##BC130419|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##NM_001005195|OR8B12|219858|olfactory receptor, family 8, subfamily B, member 12##BC136863|OR8B12|219858|olfactory receptor, family 8, subfamily B, member 12##BC136864|OR8B12|219858|olfactory receptor, family 8, subfamily B, member 12	0.148325	
chr15	39875784	39875888	reg1019038.p1	7.006	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	-2507	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	-332911	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-887038	+	AK093308 AX748045 BC045191 NM_152597	199192	-	AK091251 TSC_hg19_v1_chr15_+_40075106	199270	+	CU688250 TSC_hg19_v1_chr15_-_40212342	336449	-	AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.020885	
chr1	59512458	59512601	reg1020658.p1	7.006	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-262794	-	TSC_hg19_v1_chr1_-_59248287 BC009874	-264164	-	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-346777	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	250083	+	NM_001244714 AK054842	263224	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	768123	+	BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##BC009874|JUN|3725|jun proto-oncogene##BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)	0.0	
chr17	8286837	8286974	reg1016717.p2	7.006	+	TSC_hg19_v1_chr17_-_8286512 BC071664 AK311804 BC066316 D28413 NM_000987	-401	-	TSC_hg19_v1_chr17_-_8280023 BC024723	-6871	-	AB464602 AK131219 NM_213597	-12051	-	NM_001146684	14238	-	TSC_hg19_v1_chr17_+_8339211 AK299559 AF217798 AK056014 NM_001025579 NM_030808 BC026101 AF182078 AY004871	52285	+	BC008968 TSC_hg19_v1_chr17_-_8424250	137331	-	BC071664|RPL26|6154|ribosomal protein L26##AK311804|RPL26|6154|ribosomal protein L26##BC066316|RPL26|6154|ribosomal protein L26##NM_000987|RPL26|6154|ribosomal protein L26##BC024723|KRBA2|124751|KRAB-A domain containing 2##AK131219|KRBA2|124751|KRAB-A domain containing 2##NM_213597|KRBA2|124751|KRAB-A domain containing 2##NM_001146684|RNF222|643904|ring finger protein 222##AK299559|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AF217798|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AK056014|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##NM_001025579|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##NM_030808|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##BC026101|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AF182078|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AY004871|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##BC008968|MYH10|4628|myosin, heavy chain 10, non-muscle	0.624295	CTCF.p2:19:0.624
chr22	21894767	21894900	reg1023235.p1	7.006	+	NM_001207052	-73375	+	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	-123157	+	NM_001128635	-156794	+	NM_001128635	10539	-	NM_001128633	10916	-	NM_003347 TSC_hg19_v1_chr22_+_21922000	27146	+	NM_001207052|TMEM191C|645426|transmembrane protein 191C##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_003347|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3	0.989232	CTCF.p2:-18:0.989
chr6	15623868	15624007	reg1018713.p2	7.005	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-374824	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-375036	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-377525	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	39240	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	39353	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	505365	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.992197	CTCF.p2:12:0.992
chr8	81599541	81599701	reg1022925.p1	7.005	+	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-201137	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-515851	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-606592	-	AK131274 NM_001033723	187394	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	424693	-	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	593152	+	AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	0.0	
chr17	77982325	77982441	reg1022813.p1	7.004	+	BC044939 TSC_hg19_v1_chr17_+_77893233	-89184	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	-169241	-	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-211476	-	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	27219	-	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	28065	+	TSC_hg19_v1_chr17_+_78075349 NM_000152 NM_001079803 NM_001079804	92943	+	AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40##NM_000152|GAA|2548|glucosidase, alpha; acid##NM_001079803|GAA|2548|glucosidase, alpha; acid##NM_001079804|GAA|2548|glucosidase, alpha; acid	0.97467	CTCF.p2:-3:0.975
chr10	50369743	50369865	reg1020315.p1	7.003	+	BC029839 BC047597 NM_001164484	-27746	-	TSC_hg19_v1_chr10_-_50323537 BC041414 AK297931 AK056299 NM_001031746 NM_144984	-46281	-	NM_001006939 BC036722	-247524	-	DQ884399 TSC_hg19_v1_chr10_-_50396437 BC047724 BC104438 BC104439 NM_001010863 BC037922 BC042857 AK303891	26622	-	AK127811 NM_001135196 NM_199459 TSC_hg19_v1_chr10_+_50507214 AL833265	137407	+	NM_001080520	230102	-	BC029839|FAM170B|170370|family with sequence similarity 170, member B##BC047597|FAM170B|170370|family with sequence similarity 170, member B##NM_001164484|FAM170B|170370|family with sequence similarity 170, member B##BC041414|VSTM4|196740|V-set and transmembrane domain containing 4##AK297931|VSTM4|196740|V-set and transmembrane domain containing 4##AK056299|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001031746|VSTM4|196740|V-set and transmembrane domain containing 4##NM_144984|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18##DQ884399|C10orf128|170371|chromosome 10 open reading frame 128##BC047724|C10orf128|170371|chromosome 10 open reading frame 128##BC104438|C10orf128|170371|chromosome 10 open reading frame 128##BC104439|C10orf128|170371|chromosome 10 open reading frame 128##NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128##BC037922|C10orf128|170371|chromosome 10 open reading frame 128##BC042857|C10orf128|170371|chromosome 10 open reading frame 128##AK127811|C10orf71|118461|chromosome 10 open reading frame 71##NM_001135196|C10orf71|118461|chromosome 10 open reading frame 71##NM_199459|C10orf71|118461|chromosome 10 open reading frame 71##AL833265|C10orf71|118461|chromosome 10 open reading frame 71##NM_001080520|DRGX|644168|dorsal root ganglia homeobox	0.203356	CTCF.p2:8:0.203
chr16	50279999	50280080	reg1022250.p3	7.003	+	TSC_hg19_v1_chr16_+_50186838 AK300918 NM_001040284 NM_001040285	-93204	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	-180079	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	-180146	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	20437	+	TSC_hg19_v1_chr16_+_50308041 BC039891	28014	+	NM_001114 D25538	41784	+	AK300918|PAPD5|64282|PAP associated domain containing 5##NM_001040284|PAPD5|64282|PAP associated domain containing 5##NM_001040285|PAPD5|64282|PAP associated domain containing 5##AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK093706|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7	0.902488	CTCF.p2:-32:0.902
chr16	72890836	72890953	reg1019610.p2	7.003	+	TSC_hg19_v1_chr16_+_72699031 AK021563	-191830	+	AK122925 NM_001160213	-684546	-	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	-684851	-	TSC_hg19_v1_chr16_-_72991733 BC029653	100811	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	191327	-	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	201692	-	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC029653|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3	0.071368	
chr3	152679143	152679263	reg1019252.p2	7.003	+	NM_002563 Z49205	-126468	+	AY358260 NM_001123228	-620425	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-662010	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	200823	+	TSC_hg19_v1_chr3_+_152880058 BC012362	200845	+	AF086445 NM_001101337	523080	+	NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79	0.996493	CTCF.p2:4:0.996
chr9	44435954	44436053	reg1020158.p2	7.003	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-751160	+	NM_001145196	-805274	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-1302516	-	TSC_hg19_v1_chr9_+_45441926 BC006438	1005923	+	BC040528 NM_001113541 NM_015667	21073606	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	22021298	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.0	
chrX	53705779	53705914	reg1019423.p1	7.003	+	TSC_hg19_v1_chrX_-_53629608 AB071605	-76232	-	CR456723 TSC_hg19_v1_chrX_-_53461318 AF069134 BC008708 BC000372 BC000829 U73514 AF035555 U96132 NM_001037811 NM_004493	-244540	-	AK304179 AK057345 NM_144968 AK292871 TSC_hg19_v1_chrX_+_53449863 AK290346 BC036767 NM_001031745	-256000	+	TSC_hg19_v1_chrX_-_53713665 BC018750 BC038184 DQ097177 NM_031407 AK056671	7831	-	BC042108 NM_001184898	363763	-	BC053861 TSC_hg19_v1_chrX_-_54070368	364494	-	AB071605|HUWE1|10075|HECT, UBA and WWE domain containing 1##CR456723|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AF069134|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC008708|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC000372|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##BC000829|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##U73514|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AF035555|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##U96132|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##NM_001037811|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##NM_004493|HSD17B10|3028|hydroxysteroid (17-beta) dehydrogenase 10##AK304179|RIBC1|158787|RIB43A domain with coiled-coils 1##AK057345|RIBC1|158787|RIB43A domain with coiled-coils 1##NM_144968|RIBC1|158787|RIB43A domain with coiled-coils 1##AK292871|RIBC1|158787|RIB43A domain with coiled-coils 1##AK290346|RIBC1|158787|RIB43A domain with coiled-coils 1##BC036767|RIBC1|158787|RIB43A domain with coiled-coils 1##NM_001031745|RIBC1|158787|RIB43A domain with coiled-coils 1##BC018750|HUWE1|10075|HECT, UBA and WWE domain containing 1##BC038184|HUWE1|10075|HECT, UBA and WWE domain containing 1##DQ097177|HUWE1|10075|HECT, UBA and WWE domain containing 1##NM_031407|HUWE1|10075|HECT, UBA and WWE domain containing 1##AK056671|HUWE1|10075|HECT, UBA and WWE domain containing 1##BC042108|PHF8|23133|PHD finger protein 8##NM_001184898|PHF8|23133|PHD finger protein 8##BC053861|PHF8|23133|PHD finger protein 8	0.119794	
chr19	45520298	45520461	reg1021020.p1	7.002	+	TSC_hg19_v1_chr19_+_45504729 M83221 NM_006509 BC028013 AK290594	-15637	+	TSC_hg19_v1_chr19_+_45458649 BC012359 BT007262 CU680306 DQ892236 DQ895436	-61725	+	NM_001294 BC004865 TSC_hg19_v1_chr19_+_45458636 AK074935 AK223553 AF037339 AK075262	-61759	+	TSC_hg19_v1_chr19_+_45542313 AF042800 NM_007056 AK293333 AY358944 BC013178	21944	+	BC019352 NM_145288	59308	-	TSC_hg19_v1_chr19_+_45582529 NM_001007270 NM_001007269 NM_024707 AK024018 BC007793	62134	+	M83221|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##NM_006509|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##BC028013|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##AK290594|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##BC012359|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##BT007262|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##DQ892236|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##DQ895436|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##NM_001294|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##BC004865|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AK074935|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AK223553|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AF037339|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AK075262|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##AF042800|CLASRP|11129|CLK4-associating serine/arginine rich protein##NM_007056|CLASRP|11129|CLK4-associating serine/arginine rich protein##AK293333|CLASRP|11129|CLK4-associating serine/arginine rich protein##AY358944|CLASRP|11129|CLK4-associating serine/arginine rich protein##BC013178|CLASRP|11129|CLK4-associating serine/arginine rich protein##BC019352|ZNF296|162979|zinc finger protein 296##NM_145288|ZNF296|162979|zinc finger protein 296##NM_001007270|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_001007269|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_024707|GEMIN7|79760|gem (nuclear organelle) associated protein 7##AK024018|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC007793|GEMIN7|79760|gem (nuclear organelle) associated protein 7	0.921169	CTCF.p2:-17:0.921
chr2	38303507	38303684	reg1016098.p1	7.002	+	TSC_hg19_v1_chr2_-_38303315 AK312686 NM_000104	-275	-	U03688 BC012049 TSC_hg19_v1_chr2_-_38303294 AK297039 AK303862	-313	-	NM_001170793 NM_144713 AK057516 AF435956	-125995	+	AK316179 TSC_hg19_v1_chr2_-_38525609	221974	-	TSC_hg19_v1_chr2_-_38604411 BC053508 AK026946 AK225190 AK303985 AK308894	300809	-	TSC_hg19_v1_chr2_-_38604430 NM_001135673 NM_022374	300836	-	AK312686|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_000104|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##U03688|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##BC012049|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK303862|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1##AK316179|ATL2|64225|atlastin GTPase 2##BC053508|ATL2|64225|atlastin GTPase 2##AK026946|ATL2|64225|atlastin GTPase 2##AK225190|ATL2|64225|atlastin GTPase 2##AK303985|ATL2|64225|atlastin GTPase 2##AK308894|ATL2|64225|atlastin GTPase 2##NM_001135673|ATL2|64225|atlastin GTPase 2##NM_022374|ATL2|64225|atlastin GTPase 2	0.0	
chr1	202313025	202313133	reg1019370.p1	7.001	+	TSC_hg19_v1_chr1_-_202311082 AF161499 NM_014176	-1993	-	AK000504 AF160215 BC004152 BC019284 TSC_hg19_v1_chr1_-_202311065	-2023	-	AF190501 NM_001017404	-129797	+	TSC_hg19_v1_chr1_+_202317826 AK307591 NM_001167857 NM_001167858 NM_002481 AB003062 AF324888 BC144699 BC110907 BC034430 BC071166	4794	+	AB050641 AB050642 NM_032103 NM_032104	118791	+	AB588820 NM_001197131 TSC_hg19_v1_chr1_+_202509319	196201	+	AF161499|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##NM_014176|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AK000504|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AF160215|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##BC004152|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##BC019284|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AF190501|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_001017404|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AK307591|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167857|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167858|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_002481|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB003062|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AF324888|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC144699|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC110907|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC034430|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC071166|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050641|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050642|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032103|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032104|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB588820|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001197131|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B	0.031916	
chr2	47540328	47540462	reg1021165.p1	7.001	+	TSC_hg19_v1_chr2_-_47403685 NM_001743	-136686	-	TSC_hg19_v1_chr2_-_47403656 BC008437	-136741	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	-136745	-	NM_002354 TSC_hg19_v1_chr2_+_47596376	55947	+	TSC_hg19_v1_chr2_+_47596449 AK026585 BC014785 M26481 M32325 X14758 M33011 M32306 DQ891338 DQ894520 CR542259 CR542283	56150	+	TSC_hg19_v1_chr2_+_47630218 AK304496	89809	+	NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC008437|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##NM_002354|EPCAM|4072|epithelial cell adhesion molecule##AK026585|EPCAM|4072|epithelial cell adhesion molecule##BC014785|EPCAM|4072|epithelial cell adhesion molecule##M26481|EPCAM|4072|epithelial cell adhesion molecule##M32325|EPCAM|4072|epithelial cell adhesion molecule##X14758|EPCAM|4072|epithelial cell adhesion molecule##M33011|EPCAM|4072|epithelial cell adhesion molecule##M32306|EPCAM|4072|epithelial cell adhesion molecule##DQ891338|EPCAM|4072|epithelial cell adhesion molecule##DQ894520|EPCAM|4072|epithelial cell adhesion molecule##CR542259|EPCAM|4072|epithelial cell adhesion molecule##CR542283|EPCAM|4072|epithelial cell adhesion molecule##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.173251	
chr3	71635835	71635937	reg1020223.p1	7.001	+	TSC_hg19_v1_chr3_-_71632874 AK122710 NM_001244808 BC005055 BC054815 BC071893 BC080521 BC068481 NM_001012505 NM_001244810 NM_032682	-2908	-	AF250920 NM_001244816	-43179	-	TSC_hg19_v1_chr3_-_71542628 AF146696 BC054505	-93219	-	AK126999 TSC_hg19_v1_chr3_-_71774554 NM_001134651	138618	-	NM_001134650	142382	-	AB040799 HQ709187 NM_018971	167314	+	AK122710|FOXP1|27086|forkhead box P1##NM_001244808|FOXP1|27086|forkhead box P1##BC005055|FOXP1|27086|forkhead box P1##BC054815|FOXP1|27086|forkhead box P1##BC071893|FOXP1|27086|forkhead box P1##BC080521|FOXP1|27086|forkhead box P1##BC068481|FOXP1|27086|forkhead box P1##NM_001012505|FOXP1|27086|forkhead box P1##NM_001244810|FOXP1|27086|forkhead box P1##NM_032682|FOXP1|27086|forkhead box P1##AF250920|FOXP1|27086|forkhead box P1##NM_001244816|FOXP1|27086|forkhead box P1##AF146696|FOXP1|27086|forkhead box P1##BC054505|FOXP1|27086|forkhead box P1##AK126999|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134651|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134650|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##AB040799|GPR27|2850|G protein-coupled receptor 27##HQ709187|GPR27|2850|G protein-coupled receptor 27##NM_018971|GPR27|2850|G protein-coupled receptor 27	0.226328	CTCF.p2:9:0.226
chr12	58934405	58934535	reg1020351.p1	7.000	+	BC012776 NM_033276 BC115381 BC115382 TSC_hg19_v1_chr12_+_58335454	-599010	+	TSC_hg19_v1_chr12_+_58335326 BC033881 AF078164	-599134	+	NM_005730	-693724	-	AK301162 AY358295 NM_001136051	378845	-	AY505340 BC126169 BC126171 BC143960 AY358288 NM_153377 TSC_hg19_v1_chr12_-_59314272	379707	-	AK292857 TSC_hg19_v1_chr12_-_59314301	379832	-	BC012776|XRCC6BP1|91419|XRCC6 binding protein 1##NM_033276|XRCC6BP1|91419|XRCC6 binding protein 1##BC115381|XRCC6BP1|91419|XRCC6 binding protein 1##BC115382|XRCC6BP1|91419|XRCC6 binding protein 1##BC033881|XRCC6BP1|91419|XRCC6 binding protein 1##AF078164|XRCC6BP1|91419|XRCC6 binding protein 1##NM_005730|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	0.907566	CTCF.p2:-18:0.908
chr2	63306149	63306285	reg1022382.p1	7.000	+	NM_014562 TSC_hg19_v1_chr2_+_63277964 AK095680 AK297308 BC007621	-28252	+	NM_001199770	-29026	+	BC029477 NM_001142614	-372187	+	TSC_hg19_v1_chr2_-_63815560 AK310290	509323	-	TSC_hg19_v1_chr2_-_63815583 BX538331 AK055030 AL833623	509400	-	NM_005917	509525	+	NM_014562|OTX1|5013|orthodenticle homeobox 1##AK095680|OTX1|5013|orthodenticle homeobox 1##AK297308|OTX1|5013|orthodenticle homeobox 1##BC007621|OTX1|5013|orthodenticle homeobox 1##NM_001199770|OTX1|5013|orthodenticle homeobox 1##BC029477|EHBP1|23301|EH domain binding protein 1##NM_001142614|EHBP1|23301|EH domain binding protein 1##AK310290|WDPCP|51057|WD repeat containing planar cell polarity effector##BX538331|WDPCP|51057|WD repeat containing planar cell polarity effector##AK055030|WDPCP|51057|WD repeat containing planar cell polarity effector##AL833623|WDPCP|51057|WD repeat containing planar cell polarity effector##NM_005917|MDH1|4190|malate dehydrogenase 1, NAD (soluble)	0.899662	CTCF.p2:-19:0.900
chr5	179517551	179517670	reg1019667.p2	7.000	+	TSC_hg19_v1_chr5_-_179499095 BC113864 BC114472 AB209800 AY083998 NM_018434 BC108306	-18545	-	AK313089 BC017100 TSC_hg19_v1_chr5_-_179498743 BC082267	-18919	-	TSC_hg19_v1_chr5_-_179334854 AB014576 BC129994 NM_015043 NM_198868	-182758	-	TSC_hg19_v1_chr5_-_179636160 NM_175062 BC036802	118566	-	TSC_hg19_v1_chr5_-_179718968 AK289638	201357	-	TSC_hg19_v1_chr5_-_179719061 NM_001135044 NM_002752 NM_139068 NM_139069 NM_139070	201466	-	BC113864|RNF130|55819|ring finger protein 130##BC114472|RNF130|55819|ring finger protein 130##AB209800|RNF130|55819|ring finger protein 130##AY083998|RNF130|55819|ring finger protein 130##NM_018434|RNF130|55819|ring finger protein 130##BC108306|RNF130|55819|ring finger protein 130##AK313089|RNF130|55819|ring finger protein 130##BC017100|RNF130|55819|ring finger protein 130##BC082267|RNF130|55819|ring finger protein 130##AB014576|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##BC129994|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_015043|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_198868|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_175062|RASGEF1C|255426|RasGEF domain family, member 1C##BC036802|RASGEF1C|255426|RasGEF domain family, member 1C##AK289638|MAPK9|5601|mitogen-activated protein kinase 9##NM_001135044|MAPK9|5601|mitogen-activated protein kinase 9##NM_002752|MAPK9|5601|mitogen-activated protein kinase 9##NM_139068|MAPK9|5601|mitogen-activated protein kinase 9##NM_139069|MAPK9|5601|mitogen-activated protein kinase 9##NM_139070|MAPK9|5601|mitogen-activated protein kinase 9	0.967448	CTCF.p2:22:0.967
chr13	61834716	61834858	reg1020635.p1	6.999	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-863308	+	BX537910 NM_001146071 NM_030794	-864197	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-1096686	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	154466	-	AK289924 NM_022843	154867	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	5969717	-	EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9	0.199698	
chr7	84660241	84660402	reg1020757.p1	6.999	+	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-835999	-	NM_012431	-1381843	-	AK303925 NM_001178129	-1389575	-	NM_152754	90925	-	AK309116 TSC_hg19_v1_chr7_-_84816296	155914	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	1612904	+	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3	0.997908	CTCF.p2:-3:0.998
chr10	6711392	6711493	reg1021375.p1	6.998	+	TSC_hg19_v1_chr10_+_6622460 AY007155	-88962	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	-89181	-	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-466566	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	739808	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	741992	-	AK027849 TSC_hg19_v1_chr10_-_7659249	947775	-	AY007155|LOC439949|439949|uncharacterized LOC439949##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.881495	CTCF.p2:-16:0.881
chr10	92547798	92547903	reg1020141.p1	6.998	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-1049083	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-1086475	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-1142526	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	69596	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	69883	-	TSC_hg19_v1_chr10_+_92631241 BC006991	83407	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.990643	CTCF.p2:1:0.991
chr1	17600842	17600944	reg1019254.p2	6.998	+	AB026831 NM_016233 BC109091 BC041592 BC109092	-25294	+	AK314644 AK026652 AK225541 NM_013358 AB033768 BC130574 BC136402 HQ258487	-69228	+	AB587350 AB023211 AB030176 BC009701 TSC_hg19_v1_chr1_-_17445947 AK295783 NM_007365	-154986	-	AF229067 AK314839 NM_012387 AB017919 AK290507 AK309637 BC025718 AB527709 CU693030	33810	+	AY443100 AB527380 AY422079 NM_207421	97822	+	BC142946 TSC_hg19_v1_chr1_-_17764885	163969	-	AB026831|PADI3|51702|peptidyl arginine deiminase, type III##NM_016233|PADI3|51702|peptidyl arginine deiminase, type III##BC109091|PADI3|51702|peptidyl arginine deiminase, type III##BC041592|PADI3|51702|peptidyl arginine deiminase, type III##BC109092|PADI3|51702|peptidyl arginine deiminase, type III##AK314644|PADI1|29943|peptidyl arginine deiminase, type I##AK026652|PADI1|29943|peptidyl arginine deiminase, type I##AK225541|PADI1|29943|peptidyl arginine deiminase, type I##NM_013358|PADI1|29943|peptidyl arginine deiminase, type I##AB033768|PADI1|29943|peptidyl arginine deiminase, type I##BC130574|PADI1|29943|peptidyl arginine deiminase, type I##BC136402|PADI1|29943|peptidyl arginine deiminase, type I##HQ258487|PADI1|29943|peptidyl arginine deiminase, type I##AB023211|PADI2|11240|peptidyl arginine deiminase, type II##AB030176|PADI2|11240|peptidyl arginine deiminase, type II##BC009701|PADI2|11240|peptidyl arginine deiminase, type II##AK295783|PADI2|11240|peptidyl arginine deiminase, type II##NM_007365|PADI2|11240|peptidyl arginine deiminase, type II##AF229067|PADI4|23569|peptidyl arginine deiminase, type IV##AK314839|PADI4|23569|peptidyl arginine deiminase, type IV##NM_012387|PADI4|23569|peptidyl arginine deiminase, type IV##AB017919|PADI4|23569|peptidyl arginine deiminase, type IV##AK290507|PADI4|23569|peptidyl arginine deiminase, type IV##AK309637|PADI4|23569|peptidyl arginine deiminase, type IV##BC025718|PADI4|23569|peptidyl arginine deiminase, type IV##AY443100|PADI6|353238|peptidyl arginine deiminase, type VI##AY422079|PADI6|353238|peptidyl arginine deiminase, type VI##NM_207421|PADI6|353238|peptidyl arginine deiminase, type VI##BC142946|RCC2|55920|regulator of chromosome condensation 2	0.955393	CTCF.p2:-5:0.955
chr12	31165344	31165448	reg1022753.p1	6.998	+	AK300920 NM_001080509 TSC_hg19_v1_chr12_+_31079866 BC146917 BC146922	-85532	+	TSC_hg19_v1_chr12_+_31079681 AK293947	-85736	+	TSC_hg19_v1_chr12_+_31079362 BC084571	-86035	+	TSC_hg19_v1_chr12_-_31226728 AK096360	61336	-	TSC_hg19_v1_chr12_+_31226789 BC148224 BC111733 NM_004399 NM_030653 NM_152438 AK297607 BC050069	61382	+	TSC_hg19_v1_chr12_+_31226805 U75968 BC011264	61412	+	AK300920|TSPAN11|441631|tetraspanin 11##NM_001080509|TSPAN11|441631|tetraspanin 11##BC146917|TSPAN11|441631|tetraspanin 11##BC146922|TSPAN11|441631|tetraspanin 11##AK293947|TSPAN11|441631|tetraspanin 11##AK096360|LOC100506660|100506660|uncharacterized LOC100506660##BC148224|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_004399|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_030653|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_152438|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK297607|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050069|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75968|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC011264|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11	0.416057	CTCF.p2:-1:0.416
chr21	37632953	37633082	reg1020050.p1	6.998	+	AJ237839 NM_005128	-96179	+	TSC_hg19_v1_chr21_-_37528616 AB004851 BC037580 BC047014	-104386	-	AB041012 NM_001236 AB124847 TSC_hg19_v1_chr21_+_37507383 AK223429 BC002812 AB004854 CR541709	-125668	+	TSC_hg19_v1_chr21_+_37692548 BC058002 NM_015358 AK295133 BC007311 D50926 BC094779 BC132731 BC144116 AK292957 AB489143	59502	+	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	124673	+	BC012126 NM_012130 AY355349	205714	-	AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2##AB004851|LOC100506428|100506428|uncharacterized LOC100506428##BC037580|LOC100506428|100506428|uncharacterized LOC100506428##BC047014|LOC100506428|100506428|uncharacterized LOC100506428##AB041012|CBR3|874|carbonyl reductase 3##NM_001236|CBR3|874|carbonyl reductase 3##AB124847|CBR3|874|carbonyl reductase 3##AK223429|CBR3|874|carbonyl reductase 3##BC002812|CBR3|874|carbonyl reductase 3##AB004854|CBR3|874|carbonyl reductase 3##CR541709|CBR3|874|carbonyl reductase 3##BC058002|MORC3|23515|MORC family CW-type zinc finger 3##NM_015358|MORC3|23515|MORC family CW-type zinc finger 3##AK295133|MORC3|23515|MORC family CW-type zinc finger 3##BC007311|MORC3|23515|MORC family CW-type zinc finger 3##D50926|MORC3|23515|MORC family CW-type zinc finger 3##BC094779|MORC3|23515|MORC family CW-type zinc finger 3##BC132731|MORC3|23515|MORC family CW-type zinc finger 3##BC144116|MORC3|23515|MORC family CW-type zinc finger 3##AK292957|MORC3|23515|MORC family CW-type zinc finger 3##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14	0.0	
chr2	223966572	223966682	reg1019958.p1	6.998	+	NM_080671 TSC_hg19_v1_chr2_+_223916907 DQ192293 AK313203 BC014429 AY065987	-49730	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	-240880	+	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	-430218	+	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	500439	-	TSC_hg19_v1_chr2_-_224467100 BC022509	500480	-	TSC_hg19_v1_chr2_-_224467145 NM_003469	500552	-	NM_080671|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##DQ192293|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AK313203|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##BC014429|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AY065987|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II##BC022509|SCG2|7857|secretogranin II##NM_003469|SCG2|7857|secretogranin II	0.938118	CTCF.p2:16:0.938
chr5	23821114	23821250	reg1022881.p1	6.998	+	DQ388610 NM_020227 AK301776	-313439	+	L33477 NM_004061	-967452	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-967736	-	NM_006727	823902	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	3217489	-	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	3651221	+	DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401	0.649601	CTCF.p2:-4:0.650
chr9	97930312	97930460	reg1023285.p1	6.998	+	AK298959 TSC_hg19_v1_chr9_+_97766501 AK300486	-163911	+	NM_001193329 AJ560639	-408389	+	BC029616 TSC_hg19_v1_chr9_+_97488999	-441383	+	X66894 NM_001243743	149134	-	AK312548 AK222871 TSC_hg19_v1_chr9_-_98079974 BC015748 X66893 AK304887 NM_000136 NM_001243744	149545	-	TSC_hg19_v1_chr9_-_98268874 AB209495 AB233423 AB233424 CU692174	338487	-	AK298959|C9orf3|84909|chromosome 9 open reading frame 3##AK300486|C9orf3|84909|chromosome 9 open reading frame 3##NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3##AJ560639|C9orf3|84909|chromosome 9 open reading frame 3##BC029616|C9orf3|84909|chromosome 9 open reading frame 3##X66894|FANCC|2176|Fanconi anemia, complementation group C##NM_001243743|FANCC|2176|Fanconi anemia, complementation group C##AK312548|FANCC|2176|Fanconi anemia, complementation group C##AK222871|FANCC|2176|Fanconi anemia, complementation group C##BC015748|FANCC|2176|Fanconi anemia, complementation group C##X66893|FANCC|2176|Fanconi anemia, complementation group C##AK304887|FANCC|2176|Fanconi anemia, complementation group C##NM_000136|FANCC|2176|Fanconi anemia, complementation group C##NM_001243744|FANCC|2176|Fanconi anemia, complementation group C##AB209495|PTCH1|5727|patched 1##AB233423|PTCH1|5727|patched 1##AB233424|PTCH1|5727|patched 1	0.185929	
chr14	46517434	46517576	reg1020420.p1	6.997	+	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-794859	-	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	-795138	-	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-912316	+	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	603478	-	BC028193 NM_182830	1294910	-	AK309211 NM_001113498	1626651	-	AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	0.125579	
chr14	46959751	46959850	reg1020374.p1	6.997	+	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-1237154	-	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	-1237433	-	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-1354611	+	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	161183	-	BC028193 NM_182830	852615	-	AK309211 NM_001113498	1184356	-	AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	0.860759	CTCF.p2:19:0.861
chr8	94070113	94070240	reg1020714.p2	6.997	+	NM_001191035 TSC_hg19_v1_chr8_-_93978373 BC031029 AK097956 BC110326 DQ351291 NM_001171795 NM_001171796 NM_001171797 NM_001171798 NM_001171799	-91854	-	AK096398 NM_001191036	-92411	-	NM_001198633 NM_175634 TSC_hg19_v1_chr8_-_93115455	-954721	-	BC089453 NM_001242668	108902	-	BC037909 TSC_hg19_v1_chr8_-_94712710	642510	-	BC014598 TSC_hg19_v1_chr8_+_94712788 BC108707 NM_145269 CR627475 DQ327715 DQ327716 AK096298 CU677061	642628	+	NM_001191035|C8orf83|286144|chromosome 8 open reading frame 83##BC031029|C8orf83|286144|chromosome 8 open reading frame 83##AK097956|C8orf83|286144|chromosome 8 open reading frame 83##BC110326|C8orf83|286144|chromosome 8 open reading frame 83##DQ351291|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171795|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171796|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171797|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171798|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171799|C8orf83|286144|chromosome 8 open reading frame 83##AK096398|C8orf83|286144|chromosome 8 open reading frame 83##NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83##NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##BC089453|LOC389676|389676|uncharacterized LOC389676##NM_001242668|LOC389676|389676|uncharacterized LOC389676##BC037909|LOC642924|642924|uncharacterized LOC642924##BC014598|FAM92A1|137392|family with sequence similarity 92, member A1##BC108707|FAM92A1|137392|family with sequence similarity 92, member A1##NM_145269|FAM92A1|137392|family with sequence similarity 92, member A1##CR627475|FAM92A1|137392|family with sequence similarity 92, member A1##DQ327715|FAM92A1|137392|family with sequence similarity 92, member A1##DQ327716|FAM92A1|137392|family with sequence similarity 92, member A1##AK096298|FAM92A1|137392|family with sequence similarity 92, member A1	1.639079	CTCF.p2:-8:0.990	CTCF.p2:-51:0.649
chr10	134957515	134957604	reg1016656.p1	6.996	+	NM_001083909 TSC_hg19_v1_chr10_+_134901429 AK124728	-56102	+	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	-201521	-	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	-358053	-	TSC_hg19_v1_chr10_+_134973945 NM_152643 AK090457	16412	+	AB011076 AY606112 NM_003577	86217	+	AF068006 BC108915 BC108916 NM_014468 AB464343 EU446701	93852	+	NM_001083909|GPR123|84435|G protein-coupled receptor 123##AK124728|GPR123|84435|G protein-coupled receptor 123##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##NM_152643|KNDC1|85442|kinase non-catalytic C-lobe domain (KIND) containing 1##AK090457|KNDC1|85442|kinase non-catalytic C-lobe domain (KIND) containing 1##AB011076|UTF1|8433|undifferentiated embryonic cell transcription factor 1##AY606112|UTF1|8433|undifferentiated embryonic cell transcription factor 1##NM_003577|UTF1|8433|undifferentiated embryonic cell transcription factor 1##AF068006|VENTX|27287|VENT homeobox##BC108915|VENTX|27287|VENT homeobox##BC108916|VENTX|27287|VENT homeobox##NM_014468|VENTX|27287|VENT homeobox##EU446701|VENTX|27287|VENT homeobox	0.830069	CTCF.p2:2:0.830
chr5	58470193	58470291	reg1018379.p1	6.996	+	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	-134864	-	BC036319 NM_001197223	-174484	-	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	-591323	+	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	101688	-	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	182501	-	U50159 NM_006203 L20970	412057	-	U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.701687	CTCF.p2:17:0.702
chr8	127079278	127079384	reg1018515.p2	6.996	+	TSC_hg19_v1_chr8_-_126963395 BX648371	-115918	-	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-636752	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-975234	+	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	491224	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	491393	-	DQ486513 NM_001159542	1348525	+	BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B	0.993288	CTCF.p2:-13:0.993
chr6	64017884	64017992	reg1018683.p2	6.995	+	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	-1021937	-	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	-5730259	-	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	-6835523	+	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	11926	-	TSC_hg19_v1_chr6_+_64231650 CR749458	213717	+	TSC_hg19_v1_chr6_+_64281913 BC045571 NM_003463	263978	+	AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	0.311294	CTCF.p2:-7:0.311
chr1	229589109	229589216	reg1021606.p1	6.994	+	TSC_hg19_v1_chr1_-_229569842 AK096902 AK300697 BC012597 BX648545 J00068 NM_001100	-19320	-	NM_145257 BC071609 TSC_hg19_v1_chr1_-_229478768	-110430	-	BC015419 TSC_hg19_v1_chr1_-_229478279 BC039241	-110863	-	AB384686 DQ894268 EU176236 AK092339 AK314431 AX747487 TSC_hg19_v1_chr1_-_229644075 BC020107 AK304861	54873	-	TSC_hg19_v1_chr1_-_229644079 AK001676 NM_018230 AK304061	54938	-	TSC_hg19_v1_chr1_-_229694431 AB013380 BC064930 AF216833 NM_012089	105266	-	AK096902|ACTA1|58|actin, alpha 1, skeletal muscle##AK300697|ACTA1|58|actin, alpha 1, skeletal muscle##BC012597|ACTA1|58|actin, alpha 1, skeletal muscle##BX648545|ACTA1|58|actin, alpha 1, skeletal muscle##J00068|ACTA1|58|actin, alpha 1, skeletal muscle##NM_001100|ACTA1|58|actin, alpha 1, skeletal muscle##NM_145257|C1orf96|126731|chromosome 1 open reading frame 96##BC071609|C1orf96|126731|chromosome 1 open reading frame 96##BC015419|C1orf96|126731|chromosome 1 open reading frame 96##BC039241|C1orf96|126731|chromosome 1 open reading frame 96##DQ894268|NUP133|55746|nucleoporin 133kDa##EU176236|NUP133|55746|nucleoporin 133kDa##AK092339|NUP133|55746|nucleoporin 133kDa##AK314431|NUP133|55746|nucleoporin 133kDa##BC020107|NUP133|55746|nucleoporin 133kDa##AK304861|NUP133|55746|nucleoporin 133kDa##AK001676|NUP133|55746|nucleoporin 133kDa##NM_018230|NUP133|55746|nucleoporin 133kDa##AK304061|NUP133|55746|nucleoporin 133kDa##AB013380|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##BC064930|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##AF216833|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##NM_012089|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10	0.182448	
chr1	56358967	56359105	reg1022759.p1	6.994	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-677952	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-678000	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-853812	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	685983	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	686094	-	AK312439 TSC_hg19_v1_chr1_-_57045216	686181	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.665934	CTCF.p2:4:0.666
chr19	58822234	58822359	reg1020245.p1	6.994	+	TSC_hg19_v1_chr19_+_58816758 BC010118	-5526	+	TSC_hg19_v1_chr19_+_58816742 BC011670 AK054868	-5568	+	TSC_hg19_v1_chr19_+_58790320 AK093110 AX747928 NM_021089 AK225825 AL832049 AK294246 AK299716 BC039323 EU446717 CU691714 AB385025	-31920	+	TSC_hg19_v1_chr19_+_58838401 BX537741 NM_181846 AK128716	16092	+	BX537419 TSC_hg19_v1_chr19_-_58858950 AK056201	36653	-	TSC_hg19_v1_chr19_-_58864830 AK289417 AF414429 AK055885 AB073611 NM_130786	42546	-	BC010118|ERVK3-1|100506584|endogenous retrovirus group K3, member 1##BC011670|ERVK3-1|100506584|endogenous retrovirus group K3, member 1##AK054868|ERVK3-1|100506584|endogenous retrovirus group K3, member 1##AK093110|ZNF8|7554|zinc finger protein 8##NM_021089|ZNF8|7554|zinc finger protein 8##AK225825|ZNF8|7554|zinc finger protein 8##AK299716|ZNF8|7554|zinc finger protein 8##BC039323|ZNF8|7554|zinc finger protein 8##EU446717|ZNF8|7554|zinc finger protein 8##BX537741|ZSCAN22|342945|zinc finger and SCAN domain containing 22##NM_181846|ZSCAN22|342945|zinc finger and SCAN domain containing 22##AK128716|ZSCAN22|342945|zinc finger and SCAN domain containing 22##BX537419|A1BG|1|alpha-1-B glycoprotein##AK056201|A1BG|1|alpha-1-B glycoprotein##AK289417|A1BG|1|alpha-1-B glycoprotein##AF414429|A1BG|1|alpha-1-B glycoprotein##AK055885|A1BG|1|alpha-1-B glycoprotein##AB073611|A1BG|1|alpha-1-B glycoprotein##NM_130786|A1BG|1|alpha-1-B glycoprotein	0.830068	CTCF.p2:15:0.830
chr12	22274287	22274398	reg1020165.p1	6.992	+	AF271388 TSC_hg19_v1_chr12_+_22199226 AF397212	-75113	+	TSC_hg19_v1_chr12_+_22199207 BC016609 NM_018686 AL832975 AK022927 AK222981	-75170	+	AK056519 TSC_hg19_v1_chr12_-_22094251 BC033804	-180092	-	BC117285 BC126162 BC031081 BC046158 AK315340 EU041716 NM_003034 X77922 TSC_hg19_v1_chr12_-_22487789	213338	-	AB385344 AB011100 BC042498 TSC_hg19_v1_chr12_-_22697128 AK299353	422797	-	BC117143 BC143859 BC143860 BC143878 TSC_hg19_v1_chr12_-_22697430 AK295862	423047	-	AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##BC016609|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##NM_018686|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AL832975|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK022927|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK222981|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK056519|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##BC033804|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##BC117285|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC126162|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC031081|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC046158|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AK315340|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##EU041716|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##NM_003034|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##X77922|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AB011100|KIAA0528|9847|KIAA0528##BC042498|KIAA0528|9847|KIAA0528##AK299353|KIAA0528|9847|KIAA0528##BC117143|KIAA0528|9847|KIAA0528##BC143859|KIAA0528|9847|KIAA0528##BC143860|KIAA0528|9847|KIAA0528##BC143878|KIAA0528|9847|KIAA0528##AK295862|KIAA0528|9847|KIAA0528	0.018373	
chr3	58449505	58449651	reg1020272.p1	6.992	+	M34056 M19123 BC004115 AB528205 AM392999 AM393278 CR541911 CU674222 DQ891366 DQ894546 M34479 M34055 M54788 AB209241 AL117618 AK293153 BC000439 BC001924 TSC_hg19_v1_chr3_-_58419557 AK225569 AK311514 AK313022 J03576 X57778 AK225621 NM_000925 NM_001173468	-30096	-	TSC_hg19_v1_chr3_+_58318663 BC008943 AB209688 AK131385 AY437879 AK296215 BC014479 AY847220 AY847221 AY847222 AF399753 CU677017 DQ124707 DQ124708	-130904	+	TSC_hg19_v1_chr3_+_58318618 AY274811 NM_017771 AK000342 AK295542	-130965	+	TSC_hg19_v1_chr3_+_58477822 NM_001128214 AK075297	28260	+	AK074934 NM_153331	34513	+	AK298402 AK313512 BC033517 BC047700 TSC_hg19_v1_chr3_-_58522918 NM_003500	73322	-	M34056|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M19123|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC004115|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM392999|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM393278|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##CR541911|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ891366|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ894546|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34479|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34055|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M54788|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AB209241|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AL117618|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK293153|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC000439|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC001924|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225569|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK311514|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK313022|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##J03576|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##X57778|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225621|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_000925|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_001173468|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC008943|PXK|54899|PX domain containing serine/threonine kinase##AB209688|PXK|54899|PX domain containing serine/threonine kinase##AK131385|PXK|54899|PX domain containing serine/threonine kinase##AY437879|PXK|54899|PX domain containing serine/threonine kinase##AK296215|PXK|54899|PX domain containing serine/threonine kinase##BC014479|PXK|54899|PX domain containing serine/threonine kinase##AY847220|PXK|54899|PX domain containing serine/threonine kinase##AY847221|PXK|54899|PX domain containing serine/threonine kinase##AY847222|PXK|54899|PX domain containing serine/threonine kinase##AF399753|PXK|54899|PX domain containing serine/threonine kinase##DQ124707|PXK|54899|PX domain containing serine/threonine kinase##DQ124708|PXK|54899|PX domain containing serine/threonine kinase##AY274811|PXK|54899|PX domain containing serine/threonine kinase##NM_017771|PXK|54899|PX domain containing serine/threonine kinase##AK000342|PXK|54899|PX domain containing serine/threonine kinase##AK295542|PXK|54899|PX domain containing serine/threonine kinase##NM_001128214|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK075297|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK074934|KCTD6|200845|potassium channel tetramerisation domain containing 6##NM_153331|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK298402|ACOX2|8309|acyl-CoA oxidase 2, branched chain##AK313512|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC033517|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC047700|ACOX2|8309|acyl-CoA oxidase 2, branched chain##NM_003500|ACOX2|8309|acyl-CoA oxidase 2, branched chain	0.02467	
chr6	100547434	100547566	reg1022306.p1	6.992	+	AK123634 NM_001040179 NM_032503 AF347063	-105390	-	AY004253 NM_021620	-492851	+	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	-530897	-	NM_005068 U70212	364050	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	781600	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	781716	-	AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.993523	CTCF.p2:8:0.994
chr19	18450579	18450716	reg1017919.p1	6.991	+	TSC_hg19_v1_chr19_-_18433953 AF117235 NM_001252129 NM_012321	-16681	-	TSC_hg19_v1_chr19_-_18433887 AJ238096 AF251218 BC023665 AF182290 BC003652 BC022198 BC000387	-16760	-	TSC_hg19_v1_chr19_-_18392451 X56681	-58179	-	TSC_hg19_v1_chr19_+_18451449 AK289968 NM_017712 AK294497 BC042138 BC028063 AJ278828 AK000215	760	+	TSC_hg19_v1_chr19_+_18496967 AB000584 AK225425 AK225431 AK291530 NM_004864 BC008962 U88323 BC000529 AF019770 U51731 BT019465	46335	+	BC025744 TSC_hg19_v1_chr19_-_18508433 NM_145256 BC053659 BC033825	57773	-	AF117235|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001252129|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012321|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238096|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF251218|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC023665|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182290|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC003652|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC022198|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC000387|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##X56681|JUND|3727|jun D proto-oncogene##AK289968|PGPEP1|54858|pyroglutamyl-peptidase I##NM_017712|PGPEP1|54858|pyroglutamyl-peptidase I##AK294497|PGPEP1|54858|pyroglutamyl-peptidase I##BC042138|PGPEP1|54858|pyroglutamyl-peptidase I##BC028063|PGPEP1|54858|pyroglutamyl-peptidase I##AJ278828|PGPEP1|54858|pyroglutamyl-peptidase I##AK000215|PGPEP1|54858|pyroglutamyl-peptidase I##AB000584|GDF15|9518|growth differentiation factor 15##AK225431|GDF15|9518|growth differentiation factor 15##AK291530|GDF15|9518|growth differentiation factor 15##NM_004864|GDF15|9518|growth differentiation factor 15##BC008962|GDF15|9518|growth differentiation factor 15##U88323|GDF15|9518|growth differentiation factor 15##BC000529|GDF15|9518|growth differentiation factor 15##AF019770|GDF15|9518|growth differentiation factor 15##U51731|GDF15|9518|growth differentiation factor 15##BT019465|GDF15|9518|growth differentiation factor 15##BC025744|LRRC25|126364|leucine rich repeat containing 25##NM_145256|LRRC25|126364|leucine rich repeat containing 25##BC053659|LRRC25|126364|leucine rich repeat containing 25##BC033825|LRRC25|126364|leucine rich repeat containing 25	0.508208	CTCF.p2:-14:0.508
chr19	30457907	30457996	reg1019152.p1	6.991	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	-24669	+	BC026184 NM_001252641	-43401	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	-155050	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	405429	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	1382396	-	FJ211597 NM_001205273	1625235	+	NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5	0.877012	CTCF.p2:3:0.877
chr20	37037345	37037473	reg1020488.p1	6.991	+	TSC_hg19_v1_chr20_+_36974884 AK313625 BC022256 NM_004139 AY344471 AF105067 AB590524 CU692512 DQ891394 DQ894434 M35533	-62538	+	NM_001725 BC040955 TSC_hg19_v1_chr20_+_36932591 AK315328 AX713278 AX746123 AX752831 J04739 AK296568 BC032230 CU691936 DQ414688 AF322588	-104821	+	AK096202 NM_001029864	-148236	-	TSC_hg19_v1_chr20_-_37063964 BC012894 BC052370 BC032119 BX640887	26563	-	TSC_hg19_v1_chr20_+_37075314 AK055434 AK290212 AF454939 AF497716 BC021083 BC040237	37918	+	TSC_hg19_v1_chr20_+_37101489 AB033045 BC047482 NM_020336 AK304242 CR936800	64099	+	AK313625|LBP|3929|lipopolysaccharide binding protein##BC022256|LBP|3929|lipopolysaccharide binding protein##NM_004139|LBP|3929|lipopolysaccharide binding protein##AY344471|LBP|3929|lipopolysaccharide binding protein##AF105067|LBP|3929|lipopolysaccharide binding protein##DQ891394|LBP|3929|lipopolysaccharide binding protein##DQ894434|LBP|3929|lipopolysaccharide binding protein##M35533|LBP|3929|lipopolysaccharide binding protein##NM_001725|BPI|671|bactericidal/permeability-increasing protein##BC040955|BPI|671|bactericidal/permeability-increasing protein##AK315328|BPI|671|bactericidal/permeability-increasing protein##AX713278|BPI|671|bactericidal/permeability-increasing protein##AX746123|BPI|671|bactericidal/permeability-increasing protein##AX752831|BPI|671|bactericidal/permeability-increasing protein##J04739|BPI|671|bactericidal/permeability-increasing protein##AK296568|BPI|671|bactericidal/permeability-increasing protein##BC032230|BPI|671|bactericidal/permeability-increasing protein##DQ414688|BPI|671|bactericidal/permeability-increasing protein##AF322588|BPI|671|bactericidal/permeability-increasing protein##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755##BC012894|LOC388796|388796|uncharacterized LOC388796##BC052370|LOC388796|388796|uncharacterized LOC388796##BC032119|LOC388796|388796|uncharacterized LOC388796##BX640887|LOC388796|388796|uncharacterized LOC388796##AK055434|SNHG11|128439|small nucleolar RNA host gene 11 (non-protein coding)##BC040237|SNHG11|128439|small nucleolar RNA host gene 11 (non-protein coding)##AB033045|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##BC047482|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##NM_020336|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##AK304242|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##CR936800|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)	0.968997	CTCF.p2:9:0.969
chr21	46729075	46729181	reg1017417.p2	6.991	+	TSC_hg19_v1_chr21_+_46707955 BC022830 BC033767	-21153	+	TSC_hg19_v1_chr21_-_46707808 BC064623 AJ575591 AL110285 AB023175 AJ302079 AJ302080 AY066015 AK294966 AK290732 AK298080 NM_015227 NM_133635	-21327	-	TSC_hg19_v1_chr21_+_46572480 FJ169506	-156630	+	TSC_hg19_v1_chr21_+_46825079 AK130835 AF018082 NM_130445 BC063833	95940	+	AB590554 TSC_hg19_v1_chr21_+_46825311	96173	+	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	146290	+	BC022830|LOC642852|642852|uncharacterized LOC642852##BC033767|LOC642852|642852|uncharacterized LOC642852##BC064623|POFUT2|23275|protein O-fucosyltransferase 2##AJ575591|POFUT2|23275|protein O-fucosyltransferase 2##AL110285|POFUT2|23275|protein O-fucosyltransferase 2##AB023175|POFUT2|23275|protein O-fucosyltransferase 2##AJ302079|POFUT2|23275|protein O-fucosyltransferase 2##AJ302080|POFUT2|23275|protein O-fucosyltransferase 2##AY066015|POFUT2|23275|protein O-fucosyltransferase 2##AK294966|POFUT2|23275|protein O-fucosyltransferase 2##AK290732|POFUT2|23275|protein O-fucosyltransferase 2##AK298080|POFUT2|23275|protein O-fucosyltransferase 2##NM_015227|POFUT2|23275|protein O-fucosyltransferase 2##NM_133635|POFUT2|23275|protein O-fucosyltransferase 2##FJ169506|ADARB1|104|adenosine deaminase, RNA-specific, B1##AK130835|COL18A1|80781|collagen, type XVIII, alpha 1##AF018082|COL18A1|80781|collagen, type XVIII, alpha 1##NM_130445|COL18A1|80781|collagen, type XVIII, alpha 1##BC063833|COL18A1|80781|collagen, type XVIII, alpha 1##AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1	0.990135	CTCF.p2:0:0.990
chr4	128460070	128460233	reg1020388.p1	6.991	+	NM_024582	-2222585	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	-2826337	-	AK026960 BC063856 NM_005841	-4139478	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	93988	+	TSC_hg19_v1_chr4_+_128651573 NM_031291 AL136857 AY550240 BC022032 AB528294 AM393262 CU692468 AJ863129	191458	+	TSC_hg19_v1_chr4_+_128703445 BC040560 NM_014278	243282	+	NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##NM_031291|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AL136857|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AY550240|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC022032|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AM393262|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AJ863129|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC040560|HSPA4L|22824|heat shock 70kDa protein 4-like##NM_014278|HSPA4L|22824|heat shock 70kDa protein 4-like	0.985332	CTCF.p2:-2:0.985
chr5	21803114	21803223	reg1019129.p1	6.991	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	-343520	+	TSC_hg19_v1_chr5_+_21459621 AK290693	-343559	+	AK295087 BC031051 NM_001167667 NM_004934	-1814846	-	TSC_hg19_v1_chr5_-_22212879 AK314800	409713	-	BC047608 TSC_hg19_v1_chr5_-_22853454	1050278	-	L33477 NM_004061	1050562	-	BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	0.908254	CTCF.p2:26:0.908
chr7	74347585	74347714	reg1020713.p1	6.991	+	BC052588 TSC_hg19_v1_chr7_+_74306933 BC027480 D38436 D38502 AK309660	-40729	+	TSC_hg19_v1_chr7_-_74306725 BC095487	-40928	-	TSC_hg19_v1_chr7_-_74306685 AK303473 AK307228 AK309007	-40966	-	BC147030 BC147031 NM_001145063	31431	+	AB463349 AF410455 AM392683 DQ893169 TSC_hg19_v1_chr7_-_74489627 AL136804 AK309117 BC007823 BC019008	141953	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	141989	-	BC052588|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##BC027480|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##D38436|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##D38502|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##AK309660|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##AK303473|STAG3L2|442582|stromal antigen 3-like 2##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##NM_001145063|GATSL1|389523|GATS protein-like 1##AF410455|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AM392683|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##DQ893169|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AL136804|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK309117|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC007823|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC019008|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16	0.0	
chr10	75818515	75818647	reg1019888.p1	6.990	+	TSC_hg19_v1_chr10_+_75757873 AK304823 NM_003373 NM_014000 AK300280 AK296509 BC099919 BC039174 M33308 AB385172 DQ894680	-60675	+	BC049374 NM_001001791	-136047	-	AB208961 TSC_hg19_v1_chr10_+_75673428	-145194	+	TSC_hg19_v1_chr10_-_75910513 BC067127	91931	-	TSC_hg19_v1_chr10_-_75910561 AK315597 AK026983 AK299352 BC026232 NM_012095 NM_207012	92107	-	TSC_hg19_v1_chr10_+_75910978 NM_001202450 NM_006721 AK301590 U90338 U33936	92388	+	AK304823|VCL|7414|vinculin##NM_003373|VCL|7414|vinculin##NM_014000|VCL|7414|vinculin##AK300280|VCL|7414|vinculin##AK296509|VCL|7414|vinculin##BC039174|VCL|7414|vinculin##M33308|VCL|7414|vinculin##DQ894680|VCL|7414|vinculin##BC049374|C10orf55|414236|chromosome 10 open reading frame 55##NM_001001791|C10orf55|414236|chromosome 10 open reading frame 55##AB208961|PLAU|5328|plasminogen activator, urokinase##BC067127|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK315597|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK026983|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK299352|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##BC026232|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_012095|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_207012|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_001202450|ADK|132|adenosine kinase##NM_006721|ADK|132|adenosine kinase##AK301590|ADK|132|adenosine kinase##U90338|ADK|132|adenosine kinase##U33936|ADK|132|adenosine kinase	0.0	
chr11	82486904	82487026	reg1020501.p2	6.990	+	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	-42067	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-3335241	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-4201070	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	124552	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	125809	+	AK312323 TSC_hg19_v1_chr11_-_82782872	295908	-	BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82##AK312323|RAB30|27314|RAB30, member RAS oncogene family	0.26257	CTCF.p2:-8:0.263
chr12	27459231	27459373	reg1019825.p1	6.990	+	TSC_hg19_v1_chr12_+_27397225 AK304755	-62077	+	TSC_hg19_v1_chr12_+_27397187 AK291055	-62115	+	NM_015000 BC028603 TSC_hg19_v1_chr12_+_27397168	-62178	+	TSC_hg19_v1_chr12_+_27485806 AF256215 NM_001248002 NM_001248003 NM_001248004 NM_001248005 NM_020183 AK296706 AF246960 AF246961 AF246962 AF246963 BC125062 BC125061	26577	+	BC043511 TSC_hg19_v1_chr12_-_27599649	140302	-	NM_001145010	160440	+	AK304755|STK38L|23012|serine/threonine kinase 38 like##AK291055|STK38L|23012|serine/threonine kinase 38 like##NM_015000|STK38L|23012|serine/threonine kinase 38 like##BC028603|STK38L|23012|serine/threonine kinase 38 like##AF256215|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248002|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248003|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248004|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248005|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_020183|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AK296706|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246960|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246961|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246962|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246963|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##BC125062|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##BC125061|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##BC043511|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001145010|C12orf70|341346|chromosome 12 open reading frame 70	0.978882	CTCF.p2:38:0.979
chr11	103072914	103073063	reg1022848.p1	6.989	+	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	-92789	+	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	-110065	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	-110247	-	NM_001001711 AF429971 AK093336 AX748060 BC022018 BC022017 BC021710 BC021172	834350	+	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	961806	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	962052	-	AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_001001711|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AF429971|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK093336|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022018|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022017|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021710|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021172|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D	0.619794	CTCF.p2:-9:0.620
chr3	146295601	146295717	reg1019312.p2	6.989	+	TSC_hg19_v1_chr3_-_146262505 AF098642 AB006746 NM_021105	-33135	-	TSC_hg19_v1_chr3_-_146262343 BC021100 BC032718 BC017901 AK313377 AK300181	-33290	-	TSC_hg19_v1_chr3_-_146262279 BC070251	-33367	-	BC157886 BC171917 TSC_hg19_v1_chr3_-_146323105	27408	-	AY436642 NM_001085420	28343	-	BC041954 TSC_hg19_v1_chr3_+_147111244	815573	+	AF098642|PLSCR1|5359|phospholipid scramblase 1##AB006746|PLSCR1|5359|phospholipid scramblase 1##NM_021105|PLSCR1|5359|phospholipid scramblase 1##BC021100|PLSCR1|5359|phospholipid scramblase 1##BC032718|PLSCR1|5359|phospholipid scramblase 1##BC017901|PLSCR1|5359|phospholipid scramblase 1##AK313377|PLSCR1|5359|phospholipid scramblase 1##AK300181|PLSCR1|5359|phospholipid scramblase 1##BC070251|PLSCR1|5359|phospholipid scramblase 1##BC157886|PLSCR5|389158|phospholipid scramblase family, member 5##BC171917|PLSCR5|389158|phospholipid scramblase family, member 5##AY436642|PLSCR5|389158|phospholipid scramblase family, member 5##NM_001085420|PLSCR5|389158|phospholipid scramblase family, member 5	0.277318	CTCF.p2:7:0.277
chr1	154779598	154779778	reg1020440.p1	6.988	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-179223	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-179274	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-198988	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	52574	-	BX649146 TSC_hg19_v1_chr1_-_154840541	60813	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	63058	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.041887	
chr12	56890612	56890705	reg1018336.p1	6.988	+	AK289471 BC025661 BC036929 AK000467 AF110330 AK303772 AF223944 AK294822 BC119767 BC119768 BC059370 BC048344 NM_013267	-8618	-	NM_207344 TSC_hg19_v1_chr12_+_56862350 AF451989 AK300594 AL832247 BC020844 AK291920 BX647957 AK074733 AF289571	-28306	+	HQ258134 BC074913 BC117474 NM_012064	-42242	-	TSC_hg19_v1_chr12_+_56915603 NM_002898 BC072679 AK308885 AK293315 AK304540 D28483 AK299580 BC027863 CU693300	25039	+	AF000422 TSC_hg19_v1_chr12_-_57006969	116258	-	AK023830 TSC_hg19_v1_chr12_-_57009380	118718	-	AK289471|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC025661|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC036929|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK000467|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF110330|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK303772|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF223944|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK294822|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119767|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119768|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC059370|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC048344|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_013267|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_207344|SPRYD4|283377|SPRY domain containing 4##AF451989|SPRYD4|283377|SPRY domain containing 4##AK300594|SPRYD4|283377|SPRY domain containing 4##AL832247|SPRYD4|283377|SPRY domain containing 4##BC020844|SPRYD4|283377|SPRY domain containing 4##AK291920|SPRYD4|283377|SPRY domain containing 4##BX647957|SPRYD4|283377|SPRY domain containing 4##AK074733|SPRYD4|283377|SPRY domain containing 4##AF289571|SPRYD4|283377|SPRY domain containing 4##HQ258134|MIP|4284|major intrinsic protein of lens fiber##BC074913|MIP|4284|major intrinsic protein of lens fiber##BC117474|MIP|4284|major intrinsic protein of lens fiber##NM_012064|MIP|4284|major intrinsic protein of lens fiber##NM_002898|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC072679|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK308885|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK293315|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK304540|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##D28483|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK299580|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC027863|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AF000422|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023830|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A	0.830067	CTCF.p2:-1:0.830
chr15	91147265	91147394	reg1017600.p1	6.988	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-74133	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-215790	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-215823	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	113285	+	NM_002569 X17094	264555	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	280372	+	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene	0.054616	
chr2	86263667	86263847	reg1010265.p3	6.987	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-147671	-	AY152815 NM_001042437	-168965	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-282752	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	69226	-	NM_015425	69520	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	69584	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.0	
chr5	110092969	110093072	reg1018986.p1	6.987	+	TSC_hg19_v1_chr5_+_110074741 AK300123 BC017169 NM_138773 M74089 AK290217 AB529063	-18240	+	TSC_hg19_v1_chr5_+_110074720 AK091427	-18297	+	AK296542 BC042563 BX648527 NM_001039763	-30613	-	AY037115 NM_033035	314369	+	AF385437 NM_139281 BC133025 BC136517 AK095312 TSC_hg19_v1_chr5_+_110428045 AL832494	334939	+	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	466929	+	AK300123|SLC25A46|91137|solute carrier family 25, member 46##BC017169|SLC25A46|91137|solute carrier family 25, member 46##NM_138773|SLC25A46|91137|solute carrier family 25, member 46##M74089|SLC25A46|91137|solute carrier family 25, member 46##AK290217|SLC25A46|91137|solute carrier family 25, member 46##AK091427|SLC25A46|91137|solute carrier family 25, member 46##AK296542|TMEM232|642987|transmembrane protein 232##BC042563|TMEM232|642987|transmembrane protein 232##BX648527|TMEM232|642987|transmembrane protein 232##NM_001039763|TMEM232|642987|transmembrane protein 232##AY037115|TSLP|85480|thymic stromal lymphopoietin##NM_033035|TSLP|85480|thymic stromal lymphopoietin##AF385437|WDR36|134430|WD repeat domain 36##NM_139281|WDR36|134430|WD repeat domain 36##BC133025|WDR36|134430|WD repeat domain 36##BC136517|WDR36|134430|WD repeat domain 36##AK095312|WDR36|134430|WD repeat domain 36##AL832494|WDR36|134430|WD repeat domain 36##L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV	0.378615	CTCF.p2:-2:0.379
chr9	32581673	32581782	reg1019260.p1	6.987	+	CR456920 TSC_hg19_v1_chr9_-_32573139 AF035840 BC029247 AK289702 AF067167 BC009801 NM_001199987 NM_002493 NM_182739	-8605	-	TSC_hg19_v1_chr9_-_32552585 NM_001195622 NM_005802	-29125	-	AB045732 AB045733 AF098300 TSC_hg19_v1_chr9_-_32552567 BC060884	-29168	-	BC116181 BC116182 AF390562 NM_153809	53913	-	AK125320 NM_212558 BX647550	201789	+	AY208839 AY208836 AY208835 AY208833 NM_001195249 AK131046 AB528955 TSC_hg19_v1_chr9_-_33001627 AY208831 AY208837 AY208834 NM_001195254 AY040777 AY208829 AY208832 BC068107 AY208840 AJ565850 AJ565851 AJ565852 BX538161 AK055672 AY208830 NM_001195248 NM_001195250 NM_001195251 NM_001195252 NM_175069 NM_175073	419851	-	CR456920|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AF035840|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC029247|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AK289702|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AF067167|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC009801|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_001199987|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_002493|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_182739|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_001195622|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##NM_005802|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AB045732|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AB045733|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AF098300|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##BC060884|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##BC116181|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##BC116182|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##AF390562|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##NM_153809|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##AK125320|TMEM215|401498|transmembrane protein 215##NM_212558|TMEM215|401498|transmembrane protein 215##BX647550|TMEM215|401498|transmembrane protein 215##AY208839|APTX|54840|aprataxin##AY208836|APTX|54840|aprataxin##AY208835|APTX|54840|aprataxin##AY208833|APTX|54840|aprataxin##NM_001195249|APTX|54840|aprataxin##AK131046|APTX|54840|aprataxin##AY208831|APTX|54840|aprataxin##AY208837|APTX|54840|aprataxin##AY208834|APTX|54840|aprataxin##NM_001195254|APTX|54840|aprataxin##AY040777|APTX|54840|aprataxin##AY208829|APTX|54840|aprataxin##AY208832|APTX|54840|aprataxin##BC068107|APTX|54840|aprataxin##AY208840|APTX|54840|aprataxin##AJ565850|APTX|54840|aprataxin##AJ565851|APTX|54840|aprataxin##AJ565852|APTX|54840|aprataxin##BX538161|APTX|54840|aprataxin##AK055672|APTX|54840|aprataxin##AY208830|APTX|54840|aprataxin##NM_001195248|APTX|54840|aprataxin##NM_001195250|APTX|54840|aprataxin##NM_001195251|APTX|54840|aprataxin##NM_001195252|APTX|54840|aprataxin##NM_175069|APTX|54840|aprataxin##NM_175073|APTX|54840|aprataxin	0.99931	CTCF.p2:-6:0.999
chr1	201118644	201118787	reg1021318.p1	6.986	+	L33798 NM_000069	-37022	-	TSC_hg19_v1_chr1_+_200993085 AK022893 BC037533 BC016656	-125628	+	TSC_hg19_v1_chr1_-_200992826 AB007918 NM_001252100 NM_001252102 NM_001252103 NM_017596	-125884	-	TSC_hg19_v1_chr1_-_201123569 AK091726	4856	-	AK075335 AY138587 AK296307 TSC_hg19_v1_chr1_-_201123603 BC001106 AL136600 AK054883 AK303843 NM_016456	4897	-	BC033185 NM_001164586	41237	+	L33798|CACNA1S|779|calcium channel, voltage-dependent, L type, alpha 1S subunit##NM_000069|CACNA1S|779|calcium channel, voltage-dependent, L type, alpha 1S subunit##AB007918|KIF21B|23046|kinesin family member 21B##NM_001252100|KIF21B|23046|kinesin family member 21B##NM_001252102|KIF21B|23046|kinesin family member 21B##NM_001252103|KIF21B|23046|kinesin family member 21B##NM_017596|KIF21B|23046|kinesin family member 21B##AK091726|TMEM9|252839|transmembrane protein 9##AK075335|TMEM9|252839|transmembrane protein 9##AY138587|TMEM9|252839|transmembrane protein 9##AK296307|TMEM9|252839|transmembrane protein 9##BC001106|TMEM9|252839|transmembrane protein 9##AL136600|TMEM9|252839|transmembrane protein 9##AK054883|TMEM9|252839|transmembrane protein 9##AK303843|TMEM9|252839|transmembrane protein 9##NM_016456|TMEM9|252839|transmembrane protein 9##BC033185|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##NM_001164586|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1	0.946172	CTCF.p2:1:0.946
chr14	103239661	103239778	reg1019234.p1	6.986	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-180558	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	-180721	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-263605	-	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	4100	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	4181	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	149279	+	AF155595|RCOR1|23186|REST corepressor 1##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)	0.841312	CTCF.p2:-5:0.841
chr19	1248975	1249128	reg1021381.p4	6.986	+	TSC_hg19_v1_chr19_+_1248581 NM_177401	-477	+	TSC_hg19_v1_chr19_+_1241811 BC050458 BC018079 CR542218	-7218	+	TSC_hg19_v1_chr19_+_1241769 BC058927	-7283	+	TSC_hg19_v1_chr19_+_1249886 BC060848 BC094778	833	+	TSC_hg19_v1_chr19_+_1269330 NM_001280 AK095781 AK304185 AK304470 AK311601 AK128423 AF021336 AK094781 D78134 BC000901 BC000403	20254	+	CU674448 AB528491 EU176219 EU176522 AB451225 AB451348 BT007210 TSC_hg19_v1_chr19_+_1270968	21898	+	NM_177401|MIDN|90007|midnolin##BC050458|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC018079|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##CR542218|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC058927|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC060848|MIDN|90007|midnolin##BC094778|MIDN|90007|midnolin##NM_001280|CIRBP|1153|cold inducible RNA binding protein##AK095781|CIRBP|1153|cold inducible RNA binding protein##AK304185|CIRBP|1153|cold inducible RNA binding protein##AK304470|CIRBP|1153|cold inducible RNA binding protein##AK311601|CIRBP|1153|cold inducible RNA binding protein##AK128423|CIRBP|1153|cold inducible RNA binding protein##AF021336|CIRBP|1153|cold inducible RNA binding protein##AK094781|CIRBP|1153|cold inducible RNA binding protein##D78134|CIRBP|1153|cold inducible RNA binding protein##BC000901|CIRBP|1153|cold inducible RNA binding protein##BC000403|CIRBP|1153|cold inducible RNA binding protein##EU176219|CIRBP|1153|cold inducible RNA binding protein##EU176522|CIRBP|1153|cold inducible RNA binding protein##AB451225|CIRBP|1153|cold inducible RNA binding protein##AB451348|CIRBP|1153|cold inducible RNA binding protein##BT007210|CIRBP|1153|cold inducible RNA binding protein	0.724934	CTCF.p2:23:0.725
chr6	31409505	31409614	reg1020447.p1	6.986	+	BC016929 AK225393 L14848 NM_000247 NM_001177519 AK299135 AB590509 CU677769 AB506764 AY204547 AY750850	-38177	+	TSC_hg19_v1_chr6_+_31368497 AK310028	-41082	+	TSC_hg19_v1_chr6_-_31324990 AK124160 NM_005514 L42024	-84561	-	TSC_hg19_v1_chr6_+_31430961 BX640979 AK093953 AK290875 L06175 AJ437509 BC106759 BC113853 BC114462	21423	+	AK291927 NM_005931 BC044218 AK314228 X91625 AY885251	56339	+	NM_001011700 BC132994 BC132996	87188	+	BC016929|MICA|100507436|MHC class I polypeptide-related sequence A##AK225393|MICA|100507436|MHC class I polypeptide-related sequence A##L14848|MICA|100507436|MHC class I polypeptide-related sequence A##NM_000247|MICA|100507436|MHC class I polypeptide-related sequence A##NM_001177519|MICA|100507436|MHC class I polypeptide-related sequence A##AK299135|MICA|100507436|MHC class I polypeptide-related sequence A##AB506764|MICA|100507436|MHC class I polypeptide-related sequence A##AY204547|MICA|100507436|MHC class I polypeptide-related sequence A##AY750850|MICA|100507436|MHC class I polypeptide-related sequence A##AK124160|HLA-B|3106|major histocompatibility complex, class I, B##NM_005514|HLA-B|3106|major histocompatibility complex, class I, B##BX640979|HCP5|10866|HLA complex P5 (non-protein coding)##AK093953|HCP5|10866|HLA complex P5 (non-protein coding)##AK290875|HCP5|10866|HLA complex P5 (non-protein coding)##L06175|HCP5|10866|HLA complex P5 (non-protein coding)##BC106759|HCP5|10866|HLA complex P5 (non-protein coding)##BC113853|HCP5|10866|HLA complex P5 (non-protein coding)##BC114462|HCP5|10866|HLA complex P5 (non-protein coding)##AK291927|MICB|4277|MHC class I polypeptide-related sequence B##NM_005931|MICB|4277|MHC class I polypeptide-related sequence B##BC044218|MICB|4277|MHC class I polypeptide-related sequence B##AK314228|MICB|4277|MHC class I polypeptide-related sequence B##X91625|MICB|4277|MHC class I polypeptide-related sequence B##AY885251|MICB|4277|MHC class I polypeptide-related sequence B##NM_001011700|MCCD1|401250|mitochondrial coiled-coil domain 1##BC132994|MCCD1|401250|mitochondrial coiled-coil domain 1##BC132996|MCCD1|401250|mitochondrial coiled-coil domain 1	0.778879	CTCF.p2:22:0.779
chr8	48114936	48115055	reg1019703.p2	6.986	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	-4967390	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-5119348	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-5119362	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	58500	+	TSC_hg19_v1_chr8_+_48173521 AK303579	58524	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	58537	+	AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146	0.99508	CTCF.p2:-9:0.995
chr11	62160940	62161052	reg1021222.p1	6.985	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	-56048	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	-56171	+	HQ258026 AY236538 BC130639 BC130645 AY359052 NM_206998	-94487	-	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	25540	+	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	153240	-	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	153318	-	AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##HQ258026|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY236538|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130639|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130645|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY359052|SCGB1D4|404552|secretoglobin, family 1D, member 4##NM_206998|SCGB1D4|404552|secretoglobin, family 1D, member 4##AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein	0.639364	CTCF.p2:11:0.639
chr11	117694024	117694145	reg1019842.p1	6.984	+	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	-26125	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	-26231	-	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-495253	+	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	1350	-	BT006721 BC005302 NM_021603	4682	-	AL136699 TSC_hg19_v1_chr11_-_117747374 AY358976 BC018652 BC093040 AK311736 AL832811 AK290757	53305	-	AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2##BT006721|FXYD2|486|FXYD domain containing ion transport regulator 2##BC005302|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_021603|FXYD2|486|FXYD domain containing ion transport regulator 2##AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6##AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6	0.684986	CTCF.p2:6:0.685
chr11	47875042	47875197	reg1021883.p1	6.984	+	TSC_hg19_v1_chr11_-_47869903 BC125227 BC125228 BC009822 NM_015231	-5141	-	AB385295 D83781 TSC_hg19_v1_chr11_-_47869883 AK026236 BX647634 AK302396 AK304308 AL832029	-5238	-	EU832174 EU832267 TSC_hg19_v1_chr11_-_47788867 AK054636 BC037404 BC006557 NM_015308 AB023231	-86167	-	TSC_hg19_v1_chr11_+_48002110 NM_001098503 NM_002843 U10886	126972	+	D37781 TSC_hg19_v1_chr11_+_48002120	127001	+	TSC_hg19_v1_chr11_+_48002270 AL359057 BC063417	127240	+	BC125227|NUP160|23279|nucleoporin 160kDa##BC125228|NUP160|23279|nucleoporin 160kDa##BC009822|NUP160|23279|nucleoporin 160kDa##NM_015231|NUP160|23279|nucleoporin 160kDa##D83781|NUP160|23279|nucleoporin 160kDa##AK026236|NUP160|23279|nucleoporin 160kDa##BX647634|NUP160|23279|nucleoporin 160kDa##AK302396|NUP160|23279|nucleoporin 160kDa##AK304308|NUP160|23279|nucleoporin 160kDa##AL832029|NUP160|23279|nucleoporin 160kDa##EU832174|FNBP4|23360|formin binding protein 4##EU832267|FNBP4|23360|formin binding protein 4##AK054636|FNBP4|23360|formin binding protein 4##BC037404|FNBP4|23360|formin binding protein 4##BC006557|FNBP4|23360|formin binding protein 4##NM_015308|FNBP4|23360|formin binding protein 4##AB023231|FNBP4|23360|formin binding protein 4##NM_001098503|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_002843|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##U10886|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##D37781|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##AL359057|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##BC063417|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J	0.996616	CTCF.p2:-19:0.997
chr12	117125854	117125970	reg1019127.p2	6.984	+	NM_001085481	-128727	+	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	-154683	+	TSC_hg19_v1_chr12_-_116715263 AY338463	-410752	-	TSC_hg19_v1_chr12_-_117175822 AK309652 BC019843 AK025068 NM_024738	49826	-	TSC_hg19_v1_chr12_-_117175868 AK222983 AK298857	49957	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	50207	+	NM_001085481|MAP1LC3B2|643246|microtubule-associated protein 1 light chain 3 beta 2##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173##AY338463|MED13L|23389|mediator complex subunit 13-like##AK309652|C12orf49|79794|chromosome 12 open reading frame 49##BC019843|C12orf49|79794|chromosome 12 open reading frame 49##AK025068|C12orf49|79794|chromosome 12 open reading frame 49##NM_024738|C12orf49|79794|chromosome 12 open reading frame 49##AK222983|C12orf49|79794|chromosome 12 open reading frame 49##AK298857|C12orf49|79794|chromosome 12 open reading frame 49##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2	1.223315	CTCF.p2:34:0.991	CTCF.p2:-69:0.232
chr3	118864348	118864462	reg1019330.p2	6.984	+	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	-110722	-	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	-110872	-	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-2700032	-	AK097667 NM_152538 AK292387	492	-	AK057421 NM_152539 BC130475 BC144197	591	+	AK303924 AK313787 NM_006952 AB002155	28009	+	AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11##AK057421|C3orf30|152405|chromosome 3 open reading frame 30##NM_152539|C3orf30|152405|chromosome 3 open reading frame 30##BC130475|C3orf30|152405|chromosome 3 open reading frame 30##BC144197|C3orf30|152405|chromosome 3 open reading frame 30##AK303924|UPK1B|7348|uroplakin 1B##AK313787|UPK1B|7348|uroplakin 1B##NM_006952|UPK1B|7348|uroplakin 1B##AB002155|UPK1B|7348|uroplakin 1B	0.90372	CTCF.p2:1:0.904
chr6	159214554	159214688	reg1020547.p1	6.984	+	TSC_hg19_v1_chr6_+_159071070 NM_001009991 NM_001242384 NM_001242394 NM_001242395 AK092729 AK298712 AX747692 BC085612	-143567	+	AB590427 CR456931 DQ892606 DQ892607 DQ895846 DQ895847 EU862237 U56255 TSC_hg19_v1_chr6_-_159065772 D50663 BC105588 BC029412 AK315601 NM_006519	-148847	-	BC033450 TSC_hg19_v1_chr6_+_158957752	-256919	+	J05021 X51521 TSC_hg19_v1_chr6_-_159239246	24601	-	TSC_hg19_v1_chr6_-_159239264 BC013903 AK299456 BC068458	24638	-	TSC_hg19_v1_chr6_-_159239276 NM_003379	24684	-	NM_001009991|SYTL3|94120|synaptotagmin-like 3##NM_001242384|SYTL3|94120|synaptotagmin-like 3##NM_001242394|SYTL3|94120|synaptotagmin-like 3##NM_001242395|SYTL3|94120|synaptotagmin-like 3##AK092729|SYTL3|94120|synaptotagmin-like 3##AK298712|SYTL3|94120|synaptotagmin-like 3##BC085612|SYTL3|94120|synaptotagmin-like 3##CR456931|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892606|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892607|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895846|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895847|DYNLT1|6993|dynein, light chain, Tctex-type 1##EU862237|DYNLT1|6993|dynein, light chain, Tctex-type 1##U56255|DYNLT1|6993|dynein, light chain, Tctex-type 1##D50663|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC105588|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC029412|DYNLT1|6993|dynein, light chain, Tctex-type 1##AK315601|DYNLT1|6993|dynein, light chain, Tctex-type 1##NM_006519|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC033450|TMEM181|57583|transmembrane protein 181##J05021|EZR|7430|ezrin##X51521|EZR|7430|ezrin##BC013903|EZR|7430|ezrin##AK299456|EZR|7430|ezrin##BC068458|EZR|7430|ezrin##NM_003379|EZR|7430|ezrin	0.0	
chr20	3297389	3297485	reg1018430.p2	6.983	+	AK091157 AK296760 AX746815 NM_001174089	-77577	-	AK296508 NM_001174090	-78603	-	BC110540 BC110541 AF336127 NM_032034	-79079	-	TSC_hg19_v1_chr20_-_3388278 NM_001009984	90815	-	AK310540 TSC_hg19_v1_chr20_-_3388594	91156	-	TSC_hg19_v1_chr20_+_3451685 AK293010 NM_001207047 NM_139321 NM_139322 AK302730 BC101705	154232	+	AK091157|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##AK296760|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##NM_001174089|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##AK296508|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##NM_001174090|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##BC110540|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##BC110541|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##AF336127|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##NM_032034|SLC4A11|83959|solute carrier family 4, sodium borate transporter, member 11##NM_001009984|C20orf194|25943|chromosome 20 open reading frame 194##AK310540|C20orf194|25943|chromosome 20 open reading frame 194##AK293010|ATRN|8455|attractin##NM_001207047|ATRN|8455|attractin##NM_139321|ATRN|8455|attractin##NM_139322|ATRN|8455|attractin##AK302730|ATRN|8455|attractin##BC101705|ATRN|8455|attractin	0.984644	CTCF.p2:4:0.974
chr3	183198276	183198383	reg1019784.p1	6.983	+	TSC_hg19_v1_chr3_+_183165436 AK057000	-32899	+	NM_015078 BC064632 AK124500 AK310962	-52390	-	TSC_hg19_v1_chr3_+_182971608 AK091474 AX747008	-226723	+	AF441792 CU689348 DQ894788 EU176275 TSC_hg19_v1_chr3_-_183273495 AK097125 AK314473 BX648370 BC032348 NM_130446	75123	-	BC142993 TSC_hg19_v1_chr3_+_183353410 AK026326 AY422472 BX648466 BX648812 NM_017644	155071	+	TSC_hg19_v1_chr3_+_183415597 AB033023 BC150273 NM_018023	217293	+	AK057000|LOC100505687|100505687|uncharacterized LOC100505687##NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AF441792|KLHL6|89857|kelch-like 6 (Drosophila)##DQ894788|KLHL6|89857|kelch-like 6 (Drosophila)##EU176275|KLHL6|89857|kelch-like 6 (Drosophila)##AK097125|KLHL6|89857|kelch-like 6 (Drosophila)##AK314473|KLHL6|89857|kelch-like 6 (Drosophila)##BX648370|KLHL6|89857|kelch-like 6 (Drosophila)##BC032348|KLHL6|89857|kelch-like 6 (Drosophila)##NM_130446|KLHL6|89857|kelch-like 6 (Drosophila)##BC142993|KLHL24|54800|kelch-like 24 (Drosophila)##AK026326|KLHL24|54800|kelch-like 24 (Drosophila)##AY422472|KLHL24|54800|kelch-like 24 (Drosophila)##BX648466|KLHL24|54800|kelch-like 24 (Drosophila)##BX648812|KLHL24|54800|kelch-like 24 (Drosophila)##NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)##AB033023|YEATS2|55689|YEATS domain containing 2##BC150273|YEATS2|55689|YEATS domain containing 2##NM_018023|YEATS2|55689|YEATS domain containing 2	0.124674	
chr4	7083884	7083991	reg1019227.p2	6.983	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-14136	-	AF298592 DQ891523 DQ894713 TSC_hg19_v1_chr4_-_7069792 AK098475 AK301695 AK312882 BC024242 NM_025196	-14160	-	TSC_hg19_v1_chr4_+_7045222 AK093974 AX748390 AB590997	-38673	+	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	110458	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	352719	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	857451	-	AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AF298592|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ891523|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ894713|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK098475|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK301695|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK312882|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##BC024242|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##NM_025196|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK093974|TADA2B|93624|transcriptional adaptor 2B##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1	0.535968	CTCF.p2:9:0.536
chr5	179190281	179190385	reg1019708.p1	6.983	+	TSC_hg19_v1_chr5_+_179159831 D83785 NM_014757 AB209135 BC047937	-30481	+	TSC_hg19_v1_chr5_+_179132740 BC050534 AB527263 CU678492 DQ890627 DQ893794 S67659	-57581	+	TSC_hg19_v1_chr5_+_179126026 M94859 L18887 L10284 AK312334 AJ271880	-64212	+	NM_145867 BC029498 U11552 AK312033 TSC_hg19_v1_chr5_+_179221016 U09353 DQ890962 DQ894134 AB590307	30699	+	AK023137 NM_054013	39541	-	TSC_hg19_v1_chr5_+_179233392 NM_001142298 BC001874	43042	+	D83785|MAML1|9794|mastermind-like 1 (Drosophila)##NM_014757|MAML1|9794|mastermind-like 1 (Drosophila)##AB209135|MAML1|9794|mastermind-like 1 (Drosophila)##BC047937|MAML1|9794|mastermind-like 1 (Drosophila)##BC050534|CANX|821|calnexin##DQ890627|CANX|821|calnexin##DQ893794|CANX|821|calnexin##M94859|CANX|821|calnexin##L18887|CANX|821|calnexin##L10284|CANX|821|calnexin##AK312334|CANX|821|calnexin##AJ271880|CANX|821|calnexin##NM_145867|LTC4S|4056|leukotriene C4 synthase##BC029498|LTC4S|4056|leukotriene C4 synthase##U11552|LTC4S|4056|leukotriene C4 synthase##AK312033|LTC4S|4056|leukotriene C4 synthase##U09353|LTC4S|4056|leukotriene C4 synthase##DQ890962|LTC4S|4056|leukotriene C4 synthase##DQ894134|LTC4S|4056|leukotriene C4 synthase##AK023137|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B##NM_054013|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B##NM_001142298|SQSTM1|8878|sequestosome 1##BC001874|SQSTM1|8878|sequestosome 1	0.502431	CTCF.p2:-7:0.502
chr12	122356313	122356477	reg1020548.p2	6.982	+	TSC_hg19_v1_chr12_+_122326731 AB003177 NM_002813 AK315389 BC002383 BC004184 BC004213 DQ893594 EU831432 EU831524 AB528684	-29700	+	AK057510 NM_001171993	-29879	-	CU692906 DQ892664 DQ896049 BC024287 BC014790 X72389 TSC_hg19_v1_chr12_-_122296766 AK290826 NM_002150	-59702	-	TSC_hg19_v1_chr12_+_122356497 NM_001178003 NM_144668 BC028421 BC036233	86	+	AK296159 TSC_hg19_v1_chr12_+_122459903 NM_001024808 NM_020993 AK316486 BC113627 BC094723 HQ258124 AB590498	103498	+	TSC_hg19_v1_chr12_+_122516655 BC151841 NM_014938	160212	+	NM_002813|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK315389|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC002383|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004184|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004213|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##DQ893594|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831432|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831524|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK057510|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_001171993|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_001178003|WDR66|144406|WD repeat domain 66##NM_144668|WDR66|144406|WD repeat domain 66##BC028421|WDR66|144406|WD repeat domain 66##BC036233|WDR66|144406|WD repeat domain 66##AK296159|BCL7A|605|B-cell CLL/lymphoma 7A##NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A##NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A##AK316486|BCL7A|605|B-cell CLL/lymphoma 7A##BC113627|BCL7A|605|B-cell CLL/lymphoma 7A##BC094723|BCL7A|605|B-cell CLL/lymphoma 7A##HQ258124|BCL7A|605|B-cell CLL/lymphoma 7A##BC151841|MLXIP|22877|MLX interacting protein##NM_014938|MLXIP|22877|MLX interacting protein	0.046104	
chr4	183010593	183010733	reg1021475.p2	6.982	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-4647020	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-4647070	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-4647122	-	TSC_hg19_v1_chr4_+_183065111 AK308489	54462	+	NM_001080477 HE578284 HE578285	234491	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	827867	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.874123	CTCF.p2:10:0.874
chr11	20694304	20694418	reg1020742.p2	6.981	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	-3169	+	NM_004211 AF085412	-73414	+	BC047226 TSC_hg19_v1_chr11_+_20409261 AK301449 AK298185 AK300591 BC037544 AB590779 EU831425 EU831518	-285101	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	1520286	+	AB032435 NM_020346	1665305	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	1953000	-	AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##BC047226|PRMT3|10196|protein arginine methyltransferase 3##AK301449|PRMT3|10196|protein arginine methyltransferase 3##AK298185|PRMT3|10196|protein arginine methyltransferase 3##AK300591|PRMT3|10196|protein arginine methyltransferase 3##BC037544|PRMT3|10196|protein arginine methyltransferase 3##EU831425|PRMT3|10196|protein arginine methyltransferase 3##EU831518|PRMT3|10196|protein arginine methyltransferase 3##AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F	0.999574	CTCF.p2:19:1.000
chr9	93799524	93799680	reg1018712.p2	6.981	+	NM_001174167 X73568	-209869	+	TSC_hg19_v1_chr9_+_93564206 NM_001174168 BC011399	-235387	+	TSC_hg19_v1_chr9_+_93564100 AK290927	-235487	+	TSC_hg19_v1_chr9_-_94124185 AB528075 AM393420 CU676666 DQ892036 DQ895227 X79888 AK302453	324568	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	324597	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	386442	-	NM_001174167|SYK|6850|spleen tyrosine kinase##X73568|SYK|6850|spleen tyrosine kinase##NM_001174168|SYK|6850|spleen tyrosine kinase##BC011399|SYK|6850|spleen tyrosine kinase##AK290927|SYK|6850|spleen tyrosine kinase##AM393420|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ892036|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ895227|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##X79888|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK302453|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated	0.51384	CTCF.p2:12:0.514
chr1	244110487	244110624	reg1023574.p1	6.980	+	AL117525 NM_001206729	-103670	-	AF135794 AB463341 AM392791 AM392849 AJ245709 AF124141 AK308052 BC020479 AF085234 AY005799 BC121154 NM_005465 NM_181690	-104028	-	TSC_hg19_v1_chr1_+_243419405 AK297105 AF250731	-691120	+	TSC_hg19_v1_chr1_+_244214553 NM_205768	104001	+	TSC_hg19_v1_chr1_+_244214584 AK291408 AK293892 BC036677	104028	+	BC078175 AJ001388 NM_006352	105988	+	AL117525|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_001206729|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF135794|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392791|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392849|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AJ245709|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF124141|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AK308052|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC020479|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF085234|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AY005799|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC121154|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_005465|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_181690|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AK297105|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF250731|SDCCAG8|10806|serologically defined colon cancer antigen 8##NM_205768|ZNF238|10472|zinc finger protein 238##AK291408|ZNF238|10472|zinc finger protein 238##AK293892|ZNF238|10472|zinc finger protein 238##BC036677|ZNF238|10472|zinc finger protein 238##BC078175|ZNF238|10472|zinc finger protein 238##AJ001388|ZNF238|10472|zinc finger protein 238##NM_006352|ZNF238|10472|zinc finger protein 238	0.956554	CTCF.p2:2:0.957
chr14	105957054	105957190	reg1018115.p1	6.980	+	BX248038 NM_001134877	-603	+	BX161477 NM_001198983	-931	+	TSC_hg19_v1_chr14_+_105953533 AK098290 U09770 BC002738 DQ892958 DQ896205 BT007181 U58630	-3559	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	514	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	35819	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	135214	-	BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##BX161477|C14orf80|283643|chromosome 14 open reading frame 80##NM_001198983|C14orf80|283643|chromosome 14 open reading frame 80##AK098290|CRIP1|1396|cysteine-rich protein 1 (intestinal)##U09770|CRIP1|1396|cysteine-rich protein 1 (intestinal)##BC002738|CRIP1|1396|cysteine-rich protein 1 (intestinal)##DQ892958|CRIP1|1396|cysteine-rich protein 1 (intestinal)##DQ896205|CRIP1|1396|cysteine-rich protein 1 (intestinal)##BT007181|CRIP1|1396|cysteine-rich protein 1 (intestinal)##U58630|CRIP1|1396|cysteine-rich protein 1 (intestinal)##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)	0.716644	CTCF.p2:-32:0.717
chr16	2480512	2480620	reg1019890.p1	6.980	+	TSC_hg19_v1_chr16_+_2479464 Z36714 AK313371 U17105 BC012349 AB208829 DQ890775	-1117	+	TSC_hg19_v1_chr16_+_2479392 NM_001761	-1175	+	TSC_hg19_v1_chr16_-_2390785 AB210044 NM_001089	-89800	-	AK128408 TSC_hg19_v1_chr16_+_2510099 NM_025108 AK093788 AK301929 AX748307 BC018719 AK023971	29546	+	NM_006181 U86759	40933	+	TSC_hg19_v1_chr16_+_2525149 BC112389 NM_001199107 NM_020705 AB032997	44565	+	Z36714|CCNF|899|cyclin F##AK313371|CCNF|899|cyclin F##U17105|CCNF|899|cyclin F##BC012349|CCNF|899|cyclin F##AB208829|CCNF|899|cyclin F##DQ890775|CCNF|899|cyclin F##NM_001761|CCNF|899|cyclin F##AB210044|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##NM_001089|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##AK128408|C16orf59|80178|chromosome 16 open reading frame 59##NM_025108|C16orf59|80178|chromosome 16 open reading frame 59##AK093788|C16orf59|80178|chromosome 16 open reading frame 59##AK301929|C16orf59|80178|chromosome 16 open reading frame 59##BC018719|C16orf59|80178|chromosome 16 open reading frame 59##AK023971|C16orf59|80178|chromosome 16 open reading frame 59##NM_006181|NTN3|4917|netrin 3##U86759|NTN3|4917|netrin 3##BC112389|TBC1D24|57465|TBC1 domain family, member 24##NM_001199107|TBC1D24|57465|TBC1 domain family, member 24##NM_020705|TBC1D24|57465|TBC1 domain family, member 24##AB032997|TBC1D24|57465|TBC1 domain family, member 24	0.146424	
chr2	8901839	8901944	reg1018390.p2	6.980	+	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-79688	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1844304	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1884028	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	75828	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	241930	-	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	445001	+	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	0.62758	CTCF.p2:-2:0.628
chr3	66428798	66428935	reg1019039.p2	6.980	+	NM_001164796	-157699	+	AK092495 AX747571 NM_173471	-309582	+	BC062367 NM_001033057 NM_004742 NM_015520 TSC_hg19_v1_chr3_-_66024518	-404353	-	TSC_hg19_v1_chr3_+_66444897 AB075504	16093	+	AF381545 BC140907 NM_015541 AY730707	121986	-	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	122598	-	NM_001164796|SLC25A26|115286|solute carrier family 25, member 26##AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1	0.0	
chr6	27156740	27156870	reg1018896.p1	6.980	+	BC093849 BC093851 TSC_hg19_v1_chr6_+_27114884 AK312232 AB528147 BC134366 BC148293 NM_080596	-41922	+	AB590085 EU446970 TSC_hg19_v1_chr6_-_27114635 AJ223352 BC051872 BC064959 BC108737 BC000893 AK292062 NM_080593	-42198	-	BC016336 BC075806 AB590709 BC066250 BC067496 BC067497 HQ257982 NM_003495	-49732	+	AK097918 AK314037 NM_005865 AF052514 AK303106 AB590521	58691	+	NM_033482	123205	-	AF352327 AF336874 BC107050 NM_032030	135753	+	BC093849|HIST1H2AH|85235|histone cluster 1, H2ah##BC093851|HIST1H2AH|85235|histone cluster 1, H2ah##AK312232|HIST1H2AH|85235|histone cluster 1, H2ah##BC134366|HIST1H2AH|85235|histone cluster 1, H2ah##BC148293|HIST1H2AH|85235|histone cluster 1, H2ah##NM_080596|HIST1H2AH|85235|histone cluster 1, H2ah##EU446970|HIST1H2BK|85236|histone cluster 1, H2bk##AJ223352|HIST1H2BK|85236|histone cluster 1, H2bk##BC051872|HIST1H2BK|85236|histone cluster 1, H2bk##BC064959|HIST1H2BK|85236|histone cluster 1, H2bk##BC108737|HIST1H2BK|85236|histone cluster 1, H2bk##BC000893|HIST1H2BK|85236|histone cluster 1, H2bk##AK292062|HIST1H2BK|85236|histone cluster 1, H2bk##NM_080593|HIST1H2BK|85236|histone cluster 1, H2bk##BC016336|HIST1H4I|8294|histone cluster 1, H4i##BC075806|HIST1H4I|8294|histone cluster 1, H4i##BC066250|HIST1H4I|8294|histone cluster 1, H4i##BC067496|HIST1H4I|8294|histone cluster 1, H4i##BC067497|HIST1H4I|8294|histone cluster 1, H4i##HQ257982|HIST2H4B|554313|histone cluster 2, H4b##NM_003495|HIST1H4I|8294|histone cluster 1, H4i##AK097918|PRSS16|10279|protease, serine, 16 (thymus)##AK314037|PRSS16|10279|protease, serine, 16 (thymus)##NM_005865|PRSS16|10279|protease, serine, 16 (thymus)##AF052514|PRSS16|10279|protease, serine, 16 (thymus)##AK303106|PRSS16|10279|protease, serine, 16 (thymus)##NM_033482|POM121L2|94026|POM121 membrane glycoprotein-like 2##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83	0.267276	CTCF.p2:-18:0.267
chr11	31362644	31362740	reg1017937.p2	6.978	+	BX647348 NM_020869	-348460	-	TSC_hg19_v1_chr11_-_30607762 AB209163 AK314833 NM_001145399	-754847	-	TSC_hg19_v1_chr11_-_30605748 AK309809	-756944	-	AY247970 AK126066 NM_181807	28646	-	TSC_hg19_v1_chr11_+_31391404 NM_181706 AK123087 AL833128 AK289665 BC036571 BC044931 BC063804	28710	+	AK311611 BC023595 TSC_hg19_v1_chr11_-_31531154 AK310496 AK057788 NM_144981	168452	-	BX647348|DCDC5|100506627|doublecortin domain containing 5##NM_020869|DCDC5|100506627|doublecortin domain containing 5##AB209163|MPPED2|744|metallophosphoesterase domain containing 2##AK314833|MPPED2|744|metallophosphoesterase domain containing 2##NM_001145399|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2##AY247970|DCDC1|341019|doublecortin domain containing 1##NM_181807|DCDC1|341019|doublecortin domain containing 1##NM_181706|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK123087|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AL833128|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK289665|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC036571|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC044931|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC063804|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK311611|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC023595|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK310496|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK057788|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_144981|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	0.997924	CTCF.p2:0:0.998
chr13	39338020	39338161	reg1019022.p1	6.978	+	NM_207361	-76918	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	-414041	+	NM_016617 TSC_hg19_v1_chr13_+_38923946	-414139	+	DQ891676 EU176604 AK313632 BC025760 AK304159 NM_001144033 NM_145286	226836	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	274111	-	TSC_hg19_v1_chr13_-_39612251 NM_025138 NM_170719	274163	-	NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2##AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##DQ891676|STOML3|161003|stomatin (EPB72)-like 3##EU176604|STOML3|161003|stomatin (EPB72)-like 3##AK313632|STOML3|161003|stomatin (EPB72)-like 3##BC025760|STOML3|161003|stomatin (EPB72)-like 3##AK304159|STOML3|161003|stomatin (EPB72)-like 3##NM_001144033|STOML3|161003|stomatin (EPB72)-like 3##NM_145286|STOML3|161003|stomatin (EPB72)-like 3##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1##NM_025138|PROSER1|80209|proline and serine rich 1##NM_170719|PROSER1|80209|proline and serine rich 1	0.569045	CTCF.p2:23:0.569
chr1	66826208	66826367	reg1019720.p1	6.978	+	TSC_hg19_v1_chr1_+_66798096 AK294441	-28192	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	-28434	+	AB209081 NM_001037340 AK290006	-367884	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	173597	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	391837	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	391878	+	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1	0.0	
chr19	5377636	5377722	reg1018607.p1	6.978	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	-36885	-	TSC_hg19_v1_chr19_+_5032899 CU687848	-344780	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-408506	+	AK098722 NM_181710 AK292251 BC017592	77747	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	245079	-	TSC_hg19_v1_chr19_-_5622794 NM_014649	245186	-	AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2##NM_014649|SAFB2|9667|scaffold attachment factor B2	0.949122	CTCF.p2:-2:0.949
chr20	60556200	60556310	reg1019481.p2	6.978	+	NM_001252339 AK124724	-381431	+	AK308345 NM_001252338	-481779	+	TSC_hg19_v1_chr20_+_59827453 BC101651 BC112150 NM_001794 AK315192 L34059	-728750	+	U75308 NM_003185 Y11354 TSC_hg19_v1_chr20_-_60640882	84624	-	TSC_hg19_v1_chr20_+_60697530 BC057387 NM_144703 BC035702	141259	+	TSC_hg19_v1_chr20_+_60697578 CU691202	141389	+	NM_001252339|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK124724|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK308345|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252338|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC101651|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC112150|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001794|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK315192|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##L34059|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##U75308|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##NM_003185|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##Y11354|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##BC057387|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##NM_144703|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##BC035702|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)	0.988867	CTCF.p2:-26:0.989
chr2	50719725	50719832	reg1019802.p1	6.978	+	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	-144856	-	AY429104 BC096831 X68044 JN003607 BC118548 BC125270 M65085 S59900 M95489 AK292562 AK310367 NM_000145 NM_181446	-1338168	-	S57793 M63108 M73746 AK123498 NM_000233	-1736934	-	TSC_hg19_v1_chr2_-_51259258 BC046631	539480	-	EF539882 AK124726 NM_001135659 NM_004801	539826	-	BC019239 BC025376 NM_001008708 BC053896 BC017941 AK097260	3275178	+	AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##AY429104|FSHR|2492|follicle stimulating hormone receptor##BC096831|FSHR|2492|follicle stimulating hormone receptor##X68044|FSHR|2492|follicle stimulating hormone receptor##JN003607|FSHR|2492|follicle stimulating hormone receptor##BC118548|FSHR|2492|follicle stimulating hormone receptor##BC125270|FSHR|2492|follicle stimulating hormone receptor##M65085|FSHR|2492|follicle stimulating hormone receptor##S59900|FSHR|2492|follicle stimulating hormone receptor##M95489|FSHR|2492|follicle stimulating hormone receptor##AK292562|FSHR|2492|follicle stimulating hormone receptor##AK310367|FSHR|2492|follicle stimulating hormone receptor##NM_000145|FSHR|2492|follicle stimulating hormone receptor##NM_181446|FSHR|2492|follicle stimulating hormone receptor##S57793|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M63108|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M73746|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK123498|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##NM_000233|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##BC046631|NRXN1|9378|neurexin 1##EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1##BC019239|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC025376|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##NM_001008708|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC053896|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC017941|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)	0.979394	CTCF.p2:26:0.979
chr8	18656456	18656629	reg1019746.p1	6.978	+	EU832144 EU832237 AK296546 BX647320 BX647406 TSC_hg19_v1_chr8_-_18541614	-115010	-	D90042 NM_000015 BC067218 BC015878 D90040 AJ581144	-407754	+	AJ581141 NM_001160174	-577366	+	AB463178 BC045112 AB023159 NM_206909	9807	-	GU727648 TSC_hg19_v1_chr8_-_18871128	214570	-	TSC_hg19_v1_chr8_-_18871214 AK091317 AX746913 NM_015310	214744	-	EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3##EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3##AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3##D90042|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##NM_000015|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC067218|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC015878|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##D90040|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##AJ581144|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##AJ581141|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160174|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3##AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3##GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3##AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3	0.996521	CTCF.p2:0:0.997
chrX	132109409	132109526	reg1020968.p2	6.978	+	AK056706 NM_001077188 NM_147175	-14045	-	AK075402 TSC_hg19_v1_chrX_-_132092281 BC094718	-17211	-	TSC_hg19_v1_chrX_-_132091486 BC037325 AK295118 AL049679 AB067777 AB067776 AK295041	-18066	-	BC101189 BC101190 BC101191 BC101192 BC069073 AF285593 NM_031907	52831	-	EU446842 BC074762 BC117336 BC126361 AB464736 AF219119 NM_016521	242773	-	AB528412 CU677845 DQ891809 DQ894992 AF064826 AY052833 AF030186 NM_001448 TSC_hg19_v1_chrX_-_132549316	439707	-	AK056706|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_001077188|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_147175|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC037325|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295118|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AL049679|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067777|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067776|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295041|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC101189|USP26|83844|ubiquitin specific peptidase 26##BC101190|USP26|83844|ubiquitin specific peptidase 26##BC101191|USP26|83844|ubiquitin specific peptidase 26##BC101192|USP26|83844|ubiquitin specific peptidase 26##BC069073|USP26|83844|ubiquitin specific peptidase 26##AF285593|USP26|83844|ubiquitin specific peptidase 26##NM_031907|USP26|83844|ubiquitin specific peptidase 26##EU446842|TFDP3|51270|transcription factor Dp family, member 3##BC074762|TFDP3|51270|transcription factor Dp family, member 3##BC117336|TFDP3|51270|transcription factor Dp family, member 3##BC126361|TFDP3|51270|transcription factor Dp family, member 3##AF219119|TFDP3|51270|transcription factor Dp family, member 3##NM_016521|TFDP3|51270|transcription factor Dp family, member 3##DQ891809|GPC4|2239|glypican 4##DQ894992|GPC4|2239|glypican 4##AF064826|GPC4|2239|glypican 4##AY052833|GPC4|2239|glypican 4##AF030186|GPC4|2239|glypican 4##NM_001448|GPC4|2239|glypican 4	0.998543	CTCF.p2:-12:0.999
chr5	117947187	117947292	reg1019602.p1	6.977	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-2036725	-	TSC_hg19_v1_chr5_+_115898220 D28352	-2049015	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-2526518	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	376999	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	459572	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	459926	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.9118	CTCF.p2:0:0.912
chr12	52901014	52901159	reg1020941.p1	6.976	+	BT006899 BC125058 BC139753 CU679121 AB528521 DQ890619 DQ893788 BC069269 BC008807 BC014152 AK299386 AK299428 AK301686 AK290245 NM_005554	-14011	-	CU679121 BC130583 BC130585 L42611 BC110639 NM_173086 AK313239 AK299478	-33514	-	CU689912 AB590330 DQ891327 DQ894511 L42612 BC034535 NM_005555 AK296729	-55170	-	CU687194 AB463816 DQ892846 DQ896092 BC071906 BC024292 BC042132 AK296823 AK093720 AK303972 AK310827 AX748277 TSC_hg19_v1_chr12_-_52914179 NM_000424	13075	-	AJ308601 EU832765 GQ129308 AJ308600 BC103917 BC103918 AJ308599 AK122795 NM_033448	45746	-	AJ508777 NM_175053	66522	-	BT006899|KRT6A|3853|keratin 6A##BC125058|KRT6A|3853|keratin 6A##BC139753|KRT6A|3853|keratin 6A##DQ890619|KRT6A|3853|keratin 6A##DQ893788|KRT6A|3853|keratin 6A##BC069269|KRT6A|3853|keratin 6A##BC008807|KRT6A|3853|keratin 6A##BC014152|KRT6A|3853|keratin 6A##AK299386|KRT6A|3853|keratin 6A##AK299428|KRT6A|3853|keratin 6A##AK301686|KRT6A|3853|keratin 6A##AK290245|KRT6A|3853|keratin 6A##NM_005554|KRT6A|3853|keratin 6A##BC130583|KRT6C|286887|keratin 6C##BC130585|KRT6C|286887|keratin 6C##L42611|KRT6C|286887|keratin 6C##BC110639|KRT6C|286887|keratin 6C##NM_173086|KRT6C|286887|keratin 6C##AK313239|KRT6C|286887|keratin 6C##AK299478|KRT6C|286887|keratin 6C##DQ891327|KRT6B|3854|keratin 6B##DQ894511|KRT6B|3854|keratin 6B##L42612|KRT6B|3854|keratin 6B##BC034535|KRT6B|3854|keratin 6B##NM_005555|KRT6B|3854|keratin 6B##AK296729|KRT6B|3854|keratin 6B##DQ892846|KRT5|3852|keratin 5##DQ896092|KRT5|3852|keratin 5##BC071906|KRT5|3852|keratin 5##BC024292|KRT5|3852|keratin 5##BC042132|KRT5|3852|keratin 5##AK296823|KRT5|3852|keratin 5##AK093720|KRT5|3852|keratin 5##AK303972|KRT5|3852|keratin 5##AK310827|KRT5|3852|keratin 5##NM_000424|KRT5|3852|keratin 5##AJ308601|KRT71|112802|keratin 71##EU832765|KRT71|112802|keratin 71##GQ129308|KRT71|112802|keratin 71##AJ308600|KRT71|112802|keratin 71##BC103917|KRT71|112802|keratin 71##BC103918|KRT71|112802|keratin 71##AJ308599|KRT71|112802|keratin 71##AK122795|KRT71|112802|keratin 71##NM_033448|KRT71|112802|keratin 71##AJ508777|KRT74|121391|keratin 74##NM_175053|KRT74|121391|keratin 74	0.880412	CTCF.p2:2:0.880
chr19	19586796	19586946	reg1023176.p1	6.976	+	TSC_hg19_v1_chr19_+_19496634 NM_017660 AK303482	-90165	+	TSC_hg19_v1_chr19_+_19431662 AB385396	-155207	+	TSC_hg19_v1_chr19_+_19431637 NM_015329 AB020699	-155237	+	AB464723 DQ891603 DQ894797 AF329483 AK058166 AK313767 BC014611 NM_032037 AF348077	39494	-	TSC_hg19_v1_chr19_+_19626536 AF261134	39694	+	NM_015965 TSC_hg19_v1_chr19_+_19627033 BC009189 AK298891 AK293859 AK293965 BC000589 AF286697	40165	+	NM_017660|GATAD2A|54815|GATA zinc finger domain containing 2A##AK303482|GATAD2A|54815|GATA zinc finger domain containing 2A##NM_015329|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AB020699|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##DQ891603|TSSK6|83983|testis-specific serine kinase 6##DQ894797|TSSK6|83983|testis-specific serine kinase 6##AF329483|TSSK6|83983|testis-specific serine kinase 6##AK058166|TSSK6|83983|testis-specific serine kinase 6##AK313767|TSSK6|83983|testis-specific serine kinase 6##BC014611|TSSK6|83983|testis-specific serine kinase 6##NM_032037|TSSK6|83983|testis-specific serine kinase 6##AF348077|TSSK6|83983|testis-specific serine kinase 6##AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##NM_015965|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC009189|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AK293859|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC000589|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AF286697|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	0.076984	
chr2	228639119	228639259	reg1020166.p1	6.976	+	AF271633 BC032014 AK301490 AF283317 AK312464 NM_025243	-56468	-	AM393148 AM393273 BC131618 AL359944 CR749679 AK055355 NM_001162483 NM_020161	-141271	-	TSC_hg19_v1_chr2_+_228356287 AK295030	-282898	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	39402	+	AK097409 NM_178821 BC036377 AK098821 AK301861	97163	+	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	407173	-	AF271633|SLC19A3|80704|solute carrier family 19, member 3##BC032014|SLC19A3|80704|solute carrier family 19, member 3##AK301490|SLC19A3|80704|solute carrier family 19, member 3##AF283317|SLC19A3|80704|solute carrier family 19, member 3##AK312464|SLC19A3|80704|solute carrier family 19, member 3##NM_025243|SLC19A3|80704|solute carrier family 19, member 3##AM393148|C2orf83|56918|chromosome 2 open reading frame 83##AM393273|C2orf83|56918|chromosome 2 open reading frame 83##BC131618|C2orf83|56918|chromosome 2 open reading frame 83##AL359944|C2orf83|56918|chromosome 2 open reading frame 83##CR749679|C2orf83|56918|chromosome 2 open reading frame 83##AK055355|C2orf83|56918|chromosome 2 open reading frame 83##NM_001162483|C2orf83|56918|chromosome 2 open reading frame 83##NM_020161|C2orf83|56918|chromosome 2 open reading frame 83##AK295030|AGFG1|3267|ArfGAP with FG repeats 1##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing	0.821216	CTCF.p2:-22:0.821
chr5	179095536	179095668	reg1023757.p1	6.976	+	BC043435 BC040992 BC130442 BC130444 BC144274 BC144275 NM_001142306	-23577	-	TSC_hg19_v1_chr5_-_179051599 AK124530	-43975	-	TSC_hg19_v1_chr5_-_179050676 NM_005520	-44901	-	NM_001164444	12372	-	TSC_hg19_v1_chr5_+_179125381 AK294702	29832	+	TSC_hg19_v1_chr5_+_179125927 NM_001024649 NM_001746	30262	+	BC043435|C5orf60|285679|chromosome 5 open reading frame 60##BC040992|C5orf60|285679|chromosome 5 open reading frame 60##BC130442|C5orf60|285679|chromosome 5 open reading frame 60##BC130444|C5orf60|285679|chromosome 5 open reading frame 60##BC144274|C5orf60|285679|chromosome 5 open reading frame 60##BC144275|C5orf60|285679|chromosome 5 open reading frame 60##NM_001142306|C5orf60|285679|chromosome 5 open reading frame 60##AK124530|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)##NM_005520|HNRNPH1|3187|heterogeneous nuclear ribonucleoprotein H1 (H)##NM_001164444|CBY3|646019|chibby homolog 3 (Drosophila)##AK294702|CANX|821|calnexin##NM_001024649|CANX|821|calnexin##NM_001746|CANX|821|calnexin	0.014808	
chr11	57117437	57117550	reg1017920.p2	6.975	+	TSC_hg19_v1_chr11_+_57105826 NM_002559 BC069162 BC109287 BC074792 BC074793 AB016608	-11572	+	AB209132 BC091486 TSC_hg19_v1_chr11_-_57103354 M86737 NM_003146	-14144	-	TSC_hg19_v1_chr11_-_57092425 AB051528 BC150333 NM_033396 AK124903	-25118	-	AY358930 BC069126 AF132209 NM_006093	31119	-	M35670 X14088 AK312195 BC005929 M36805 Y00809 NM_001243245 NM_002728 X65787	40623	-	TSC_hg19_v1_chr11_-_57194537 AK311394 NM_014096	77038	-	NM_002559|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC069162|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC109287|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC074792|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC074793|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##AB016608|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##AB209132|SSRP1|6749|structure specific recognition protein 1##BC091486|SSRP1|6749|structure specific recognition protein 1##M86737|SSRP1|6749|structure specific recognition protein 1##NM_003146|SSRP1|6749|structure specific recognition protein 1##AB051528|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##BC150333|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##NM_033396|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AK124903|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AY358930|PRG3|10394|proteoglycan 3##BC069126|PRG3|10394|proteoglycan 3##AF132209|PRG3|10394|proteoglycan 3##NM_006093|PRG3|10394|proteoglycan 3##M35670|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##X14088|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##AK312195|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##BC005929|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##M36805|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##Y00809|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##NM_001243245|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##NM_002728|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##X65787|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##AK311394|SLC43A3|29015|solute carrier family 43, member 3##NM_014096|SLC43A3|29015|solute carrier family 43, member 3	0.997427	CTCF.p2:-7:0.997
chr1	234250466	234250601	reg1020667.p1	6.975	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-209921	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-500614	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	-500710	+	TSC_hg19_v1_chr1_+_234350005 BC037878	99473	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	258839	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	364327	-	AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##BC037878|SLC35F3|148641|solute carrier family 35, member F3##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1	0.979529	CTCF.p2:-9:0.980
chr6	85278809	85278949	reg1020689.p1	6.975	+	AB023226 AK308190 BC063632 NM_014895 TSC_hg19_v1_chr6_-_84937334	-341555	-	TSC_hg19_v1_chr6_+_84743459 AK090775 AX746611 NM_138409 BC010003 AK307078 AK292736 BC039855	-535473	+	TSC_hg19_v1_chr6_+_84569438 AB527313 AM393033	-709415	+	TSC_hg19_v1_chr6_-_85472330 AJ010278	193446	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	194291	-	HQ258462 NM_001080508 BC157841 BC132715	195046	-	AB023226|KIAA1009|22832|KIAA1009##AK308190|KIAA1009|22832|KIAA1009##BC063632|KIAA1009|22832|KIAA1009##NM_014895|KIAA1009|22832|KIAA1009##AK090775|MRAP2|112609|melanocortin 2 receptor accessory protein 2##NM_138409|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC010003|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK307078|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK292736|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC039855|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AM393033|CYB5R4|51167|cytochrome b5 reductase 4##AJ010278|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18##HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18	0.680163	CTCF.p2:13:0.680
chr1	15105746	15105870	reg1019881.p1	6.974	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	-180614	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-1029867	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-1029885	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	144911	+	AY505121 NM_001018001	150487	+	AY505122 NM_001017999	166606	+	AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein	0.965894	CTCF.p2:10:0.966
chr14	30844622	30844775	reg1020466.p2	6.974	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	-447844	-	TSC_hg19_v1_chr14_+_29241992 BX248251	-1602703	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-1607785	+	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	183662	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	246826	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	246846	+	AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1	0.92001	CTCF.p2:0:0.920
chr14	37117293	37117370	reg1030914.p1	6.974	+	BC041090 NM_014360 AF000295 AK313537	-65533	-	BT009773 DQ892964 DQ896211 D50740 BC006221 U43203 NM_001079668	-127950	-	NM_003317 U33749	-128429	-	NM_006194	9441	+	TSC_hg19_v1_chr14_+_37131069 BC001159	13753	+	AK313627 TSC_hg19_v1_chr14_+_37131133 AB248958	13794	+	BC041090|NKX2-8|26257|NK2 homeobox 8##NM_014360|NKX2-8|26257|NK2 homeobox 8##AF000295|NKX2-8|26257|NK2 homeobox 8##AK313537|NKX2-8|26257|NK2 homeobox 8##BT009773|NKX2-1|7080|NK2 homeobox 1##DQ892964|NKX2-1|7080|NK2 homeobox 1##DQ896211|NKX2-1|7080|NK2 homeobox 1##D50740|NKX2-1|7080|NK2 homeobox 1##BC006221|NKX2-1|7080|NK2 homeobox 1##U43203|NKX2-1|7080|NK2 homeobox 1##NM_001079668|NKX2-1|7080|NK2 homeobox 1##NM_003317|NKX2-1|7080|NK2 homeobox 1##U33749|NKX2-1|7080|NK2 homeobox 1##NM_006194|PAX9|5083|paired box 9##BC001159|PAX9|5083|paired box 9##AK313627|PAX9|5083|paired box 9##AB248958|PAX9|5083|paired box 9	0.472911	CTCF.p2:-2:0.473
chr17	16892717	16892898	reg1020444.p2	6.974	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	-17403	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-299203	+	AK131401 NM_020787	-335646	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	53157	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	216806	-	TSC_hg19_v1_chr17_-_17109636 BC031263 AK295282 NM_178836	216850	-	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6##BC031263|PLD6|201164|phospholipase D family, member 6##AK295282|PLD6|201164|phospholipase D family, member 6##NM_178836|PLD6|201164|phospholipase D family, member 6	0.0	
chr19	1897707	1897887	reg1021153.p1	6.974	+	TSC_hg19_v1_chr19_-_1885489 AK289533 BC035961 AK074548 NM_001130111 NM_031213	-12293	-	TSC_hg19_v1_chr19_-_1885477 BC009256 BC033749	-12326	-	BC020512 TSC_hg19_v1_chr19_-_1885459 BC094816 BC071876 BC071644	-12352	-	TSC_hg19_v1_chr19_+_1905370 AK074586 NM_079834	7555	+	TSC_hg19_v1_chr19_+_1905397 AK074967 AK126544 AK307641 BC016509 BC062598 AK307700 AK092056 AX747336 BC011747 BC011824 NM_138422	7608	+	TSC_hg19_v1_chr19_+_1941164 NM_001319	43366	+	AK289533|FAM108A1|81926|family with sequence similarity 108, member A1##BC035961|FAM108A1|81926|family with sequence similarity 108, member A1##AK074548|FAM108A1|81926|family with sequence similarity 108, member A1##NM_001130111|FAM108A1|81926|family with sequence similarity 108, member A1##NM_031213|FAM108A1|81926|family with sequence similarity 108, member A1##BC009256|FAM108A1|81926|family with sequence similarity 108, member A1##BC033749|FAM108A1|81926|family with sequence similarity 108, member A1##BC020512|FAM108A1|81926|family with sequence similarity 108, member A1##BC094816|FAM108A1|81926|family with sequence similarity 108, member A1##BC071876|FAM108A1|81926|family with sequence similarity 108, member A1##BC071644|FAM108A1|81926|family with sequence similarity 108, member A1##AK074586|SCAMP4|113178|secretory carrier membrane protein 4##NM_079834|SCAMP4|113178|secretory carrier membrane protein 4##AK074967|SCAMP4|113178|secretory carrier membrane protein 4##AK307641|SCAMP4|113178|secretory carrier membrane protein 4##BC016509|SCAMP4|113178|secretory carrier membrane protein 4##BC062598|SCAMP4|113178|secretory carrier membrane protein 4##AK307700|SCAMP4|113178|secretory carrier membrane protein 4##AK092056|SCAMP4|113178|secretory carrier membrane protein 4##BC011747|SCAMP4|113178|secretory carrier membrane protein 4##BC011824|ADAT3|113179|adenosine deaminase, tRNA-specific 3##NM_138422|ADAT3|113179|adenosine deaminase, tRNA-specific 3##NM_001319|CSNK1G2|1455|casein kinase 1, gamma 2	0.955532	CTCF.p2:3:0.956
chr4	48111818	48111942	reg1018347.p1	6.974	+	TSC_hg19_v1_chr4_+_48018788 BC067881 CR749484 NM_207330 AK095299	-93077	+	X64802 TSC_hg19_v1_chr4_-_48018662	-93243	-	AK292021 NM_000087	-96920	-	BC017829 L27071 NM_003328	24378	-	BC101711 BC101713 BC143487 NM_003215 TSC_hg19_v1_chr4_-_48271858	159955	-	BC040993 TSC_hg19_v1_chr4_+_48343485 AK291006	231531	+	BC067881|NIPAL1|152519|NIPA-like domain containing 1##CR749484|NIPAL1|152519|NIPA-like domain containing 1##NM_207330|NIPAL1|152519|NIPA-like domain containing 1##AK095299|NIPAL1|152519|NIPA-like domain containing 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1##AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1##BC017829|TXK|7294|TXK tyrosine kinase##L27071|TXK|7294|TXK tyrosine kinase##NM_003328|TXK|7294|TXK tyrosine kinase##BC101711|TEC|7006|tec protein tyrosine kinase##BC101713|TEC|7006|tec protein tyrosine kinase##BC143487|TEC|7006|tec protein tyrosine kinase##NM_003215|TEC|7006|tec protein tyrosine kinase##BC040993|SLAIN2|57606|SLAIN motif family, member 2##AK291006|SLAIN2|57606|SLAIN motif family, member 2	0.996567	CTCF.p2:-2:0.997
chr5	111574327	111574447	reg1020755.p1	6.974	+	TSC_hg19_v1_chr5_+_111496560 AB002437	-77818	+	AK298779 NM_001142474 NM_001142475	-261813	-	NM_001142477 TSC_hg19_v1_chr5_-_111093886 NM_001142476	-480534	-	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	180486	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	468824	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	499186	+	AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13##AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli	0.173491	
chr6_cox_hap2	2854743	2854841	reg1020498.p1	6.974	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.830069	CTCF.p2:0:0.830
chr6	106808344	106808467	reg1021429.p1	6.973	+	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	-34742	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	-34873	-	BC002699 TSC_hg19_v1_chr6_-_106773313	-35097	-	AK056705 NM_001624	151324	+	TSC_hg19_v1_chr6_+_106960443 U83115	152006	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	268875	-	CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK056705|AIM1|202|absent in melanoma 1##NM_001624|AIM1|202|absent in melanoma 1##U83115|AIM1|202|absent in melanoma 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1	0.824367	CTCF.p2:8:0.824
chr1	171454484	171454595	reg1019626.p2	6.972	+	BC002780 NM_002022 Z11737	-171111	+	AK290113 AK315100 M64082 NM_002021 AK296198	-236878	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	-300117	+	TSC_hg19_v1_chr1_+_171454689 BC066968 NM_015172 BC058930 BC026108 BC045713 BC001260 BC006090	155	+	AF253978 AL096857 TSC_hg19_v1_chr1_+_171481269 AF488829	26713	+	AB528547 DQ892415 DQ895629 AF001620 FJ227302 FJ237046 FJ237047 NM_000261 U85257 D88214 BC029261 AK300924 AK300943 AK301297 AK315443 AK097310	167261	-	BC002780|FMO4|2329|flavin containing monooxygenase 4##NM_002022|FMO4|2329|flavin containing monooxygenase 4##Z11737|FMO4|2329|flavin containing monooxygenase 4##AK290113|FMO1|2326|flavin containing monooxygenase 1##AK315100|FMO1|2326|flavin containing monooxygenase 1##M64082|FMO1|2326|flavin containing monooxygenase 1##NM_002021|FMO1|2326|flavin containing monooxygenase 1##AK296198|FMO1|2326|flavin containing monooxygenase 1##NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC066968|PRRC2C|23215|proline-rich coiled-coil 2C##NM_015172|PRRC2C|23215|proline-rich coiled-coil 2C##BC058930|PRRC2C|23215|proline-rich coiled-coil 2C##BC026108|PRRC2C|23215|proline-rich coiled-coil 2C##BC045713|PRRC2C|23215|proline-rich coiled-coil 2C##BC001260|PRRC2C|23215|proline-rich coiled-coil 2C##BC006090|PRRC2C|23215|proline-rich coiled-coil 2C##AF253978|PRRC2C|23215|proline-rich coiled-coil 2C##AL096857|PRRC2C|23215|proline-rich coiled-coil 2C##AF488829|PRRC2C|23215|proline-rich coiled-coil 2C##DQ892415|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##DQ895629|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AF001620|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ227302|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ237046|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ237047|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##NM_000261|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##U85257|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##D88214|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##BC029261|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK300924|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK300943|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK301297|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK315443|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK097310|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response	0.049655	
chr12	133757891	133758037	reg1019430.p1	6.972	+	AK314784 BC024182 NM_015394	-50752	+	TSC_hg19_v1_chr12_+_133657517 BC040561 AK296572 AK313145 BC022291	-100427	+	U09368 TSC_hg19_v1_chr12_+_133657460 AK303240	-100510	+	AF317549 NM_001165883 NM_001165884 NM_001165885 NM_001165886 NM_001165887 NM_003415 NM_152943 BC110542 NM_001165881 NM_001165882 TSC_hg19_v1_chr12_+_133758099 AK027712 AF432217 BC058548 AF141655 AF385187 AY583691 DQ057356 DQ057357 DQ057358 DQ057359 DQ057360 DQ057361	135	+	AK057223 NM_001191054	54453	-	None	None	None	AK314784|ZNF10|7556|zinc finger protein 10##BC024182|ZNF10|7556|zinc finger protein 10##NM_015394|ZNF10|7556|zinc finger protein 10##BC040561|ZNF140|7699|zinc finger protein 140##AK296572|ZNF140|7699|zinc finger protein 140##AK313145|ZNF140|7699|zinc finger protein 140##BC022291|ZNF140|7699|zinc finger protein 140##U09368|ZNF140|7699|zinc finger protein 140##AK303240|ZNF140|7699|zinc finger protein 140##AF317549|ZNF268|10795|zinc finger protein 268##NM_001165883|ZNF268|10795|zinc finger protein 268##NM_001165884|ZNF268|10795|zinc finger protein 268##NM_001165885|ZNF268|10795|zinc finger protein 268##NM_001165886|ZNF268|10795|zinc finger protein 268##NM_001165887|ZNF268|10795|zinc finger protein 268##NM_003415|ZNF268|10795|zinc finger protein 268##NM_152943|ZNF268|10795|zinc finger protein 268##BC110542|ZNF268|10795|zinc finger protein 268##NM_001165881|ZNF268|10795|zinc finger protein 268##NM_001165882|ZNF268|10795|zinc finger protein 268##AK027712|ZNF268|10795|zinc finger protein 268##AF432217|ZNF268|10795|zinc finger protein 268##BC058548|ZNF268|10795|zinc finger protein 268##AF141655|ZNF268|10795|zinc finger protein 268##AF385187|ZNF268|10795|zinc finger protein 268##AY583691|ZNF268|10795|zinc finger protein 268##DQ057356|ZNF268|10795|zinc finger protein 268##DQ057357|ZNF268|10795|zinc finger protein 268##DQ057358|ZNF268|10795|zinc finger protein 268##DQ057359|ZNF268|10795|zinc finger protein 268##DQ057360|ZNF268|10795|zinc finger protein 268##DQ057361|ZNF268|10795|zinc finger protein 268##AK057223|LOC647589|647589|uncharacterized LOC647589##NM_001191054|LOC647589|647589|uncharacterized LOC647589	0.022797	
chr2	89524399	89524580	reg1019794.p2	6.972	+	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-11256	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-81900	-	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	-232076	-	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	95364	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	553265	+	TSC_hg19_v1_chr2_+_90211706 Z69013	687229	+	BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC070334|IGKC|3514|immunoglobulin kappa constant	0.971665	CTCF.p2:-4:0.972
chr5	39376481	39376593	reg1019381.p1	6.971	+	K02766 AB590412 DQ891410 CU676664 X02176 AK308045 BC020721 NM_001737	-11929	-	TSC_hg19_v1_chr5_-_39270745 AK297077 NM_001243093	-105798	-	BC117449 BC143645 BC015933 BX647195 BX647196 TSC_hg19_v1_chr5_-_39219666 AK130159 AK290403 NM_001465 NM_199335	-156908	-	DQ891872 EU176643 AB590149 CU678354 AF188298 TSC_hg19_v1_chr5_-_39394510 U39050	17934	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	48414	-	TSC_hg19_v1_chr5_-_39425082 AK314381	48527	-	K02766|C9|735|complement component 9##DQ891410|C9|735|complement component 9##X02176|C9|735|complement component 9##AK308045|C9|735|complement component 9##BC020721|C9|735|complement component 9##NM_001737|C9|735|complement component 9##AK297077|FYB|2533|FYN binding protein##NM_001243093|FYB|2533|FYN binding protein##BC117449|FYB|2533|FYN binding protein##BC143645|FYB|2533|FYN binding protein##BC015933|FYB|2533|FYN binding protein##BX647195|FYB|2533|FYN binding protein##BX647196|FYB|2533|FYN binding protein##AK130159|FYB|2533|FYN binding protein##AK290403|FYB|2533|FYN binding protein##NM_001465|FYB|2533|FYN binding protein##NM_199335|FYB|2533|FYN binding protein##DQ891872|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##EU176643|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AF188298|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U39050|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)	0.994629	CTCF.p2:0:0.995
chr14	52021831	52021928	reg1021132.p1	6.970	+	AL833158 NM_001042481	-66025	+	NM_030755 AB048246 TSC_hg19_v1_chr14_+_51706980 AK302416 BC036460 BC016769 BC050366 AK075395 BC032834 AK303134 AL080080 BC056874 AY358640 AK312905 DQ891674 DQ894860 CU690352	-314930	+	NM_015163 NM_052978	-459458	-	TSC_hg19_v1_chr14_+_52118627 BX161430 NM_152330 BC020521 AK315764 AK055545 BX647863	96751	+	NM_001243773 NM_001243774 NM_053064 AK092371	305197	+	TSC_hg19_v1_chr14_+_52327329 AK307171	305444	+	AL833158|FRMD6|122786|FERM domain containing 6##NM_001042481|FRMD6|122786|FERM domain containing 6##NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1##AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1##BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1##BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1##BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1##AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1##BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1##AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1##AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1##BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1##AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1##AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1##NM_015163|TRIM9|114088|tripartite motif containing 9##NM_052978|TRIM9|114088|tripartite motif containing 9##BX161430|FRMD6|122786|FERM domain containing 6##NM_152330|FRMD6|122786|FERM domain containing 6##BC020521|FRMD6|122786|FERM domain containing 6##AK315764|FRMD6|122786|FERM domain containing 6##AK055545|FRMD6|122786|FERM domain containing 6##BX647863|FRMD6|122786|FERM domain containing 6##NM_001243773|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_001243774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	0.973225	CTCF.p2:-7:0.973
chr16	48147532	48147669	reg1024448.p1	6.970	+	TSC_hg19_v1_chr16_+_47495241 X84908 CR936710 BC033657 AK309226	-652361	+	TSC_hg19_v1_chr16_+_47495206 NM_000293 NM_001031835 AK298588	-652412	+	TSC_hg19_v1_chr16_-_47495158 AF212247 AK301908	-652443	-	AY196326 AY040220 NM_033226	33020	-	AY040219 NM_033151	118581	-	AF367202 AF411579 NM_032583 NM_145186	121487	-	X84908|PHKB|5257|phosphorylase kinase, beta##CR936710|PHKB|5257|phosphorylase kinase, beta##BC033657|PHKB|5257|phosphorylase kinase, beta##AK309226|PHKB|5257|phosphorylase kinase, beta##NM_000293|PHKB|5257|phosphorylase kinase, beta##NM_001031835|PHKB|5257|phosphorylase kinase, beta##AF212247|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK301908|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AY196326|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040220|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##NM_033226|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040219|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_033151|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF367202|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF411579|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_032583|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_145186|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11	0.999636	CTCF.p2:-9:1.000
chr3	1123835	1123959	reg1021124.p1	6.970	+	AK126307 TSC_hg19_v1_chr3_+_577916	-545982	+	NM_001253388 BC104918 BC143496 BC143498 AB384920	-762485	+	TSC_hg19_v1_chr3_+_239671 AK055236	-884226	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	10766	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	1016664	+	NM_001206955	1156615	+	NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK055236|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4	0.999795	CTCF.p2:-6:1.000
chr8	58333442	58333622	reg1002310.p2	6.970	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-427106	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-427130	-	TSC_hg19_v1_chr8_-_57906381 BC017797	-427154	-	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	573625	+	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	990353	+	X56088 M93133 BC101777 BC112184 NM_000780	1079175	-	AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	0.0	
chrX	77963834	77963975	reg1019961.p1	6.970	+	AK096184 NM_152694	-49080	-	BC035750 DQ131801 DQ131800 AK023929 DQ131802 NM_006639 AK313643 DQ131799	-380821	-	AB529179 DQ891928 DQ895115 BC071649 TSC_hg19_v1_chrX_-_77395133 AF220509 BC009566 AK312579 BC010350 BC146952 BC146960 NM_015975	-568761	-	NM_005296 AK314134	39304	+	NM_014499 NM_198333 AK313218 AK292138 BC051875	236968	+	AF345567 BC104922 BC104924 NM_032553	462564	+	AK096184|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_152694|ZCCHC5|203430|zinc finger, CCHC domain containing 5##BC035750|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131801|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131800|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK023929|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131802|CYSLTR1|10800|cysteinyl leukotriene receptor 1##NM_006639|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK313643|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131799|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ891928|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##DQ895115|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC071649|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AF220509|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC009566|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AK312579|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC010350|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146952|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146960|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##NM_015975|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AF345567|GPR174|84636|G protein-coupled receptor 174##BC104922|GPR174|84636|G protein-coupled receptor 174##BC104924|GPR174|84636|G protein-coupled receptor 174##NM_032553|GPR174|84636|G protein-coupled receptor 174	0.829631	CTCF.p2:-4:0.830
chr11	3131475	3131584	reg1019570.p1	6.969	+	BT009913 CU678270 DQ890773 AK308005 TSC_hg19_v1_chr11_-_3078625 AB208814 AF288206 AF288207 AK222614 AK296763 AK131221 AK096313 AK295371 AK298514 AK302644 BX647906 AK289432 BC002880 NM_001014437 NM_001194997 NM_001751 NM_139273	-52891	-	TSC_hg19_v1_chr11_-_3013610 NM_005969 U77456 AK312599	-117930	-	AK316324 TSC_hg19_v1_chr11_-_3013560	-117974	-	AK301003 TSC_hg19_v1_chr11_-_3147850	16314	-	TSC_hg19_v1_chr11_-_3186504 BC032646 BC039579 AF392453 AL136918	54960	-	TSC_hg19_v1_chr11_-_3186518 AK303205	54983	-	BT009913|CARS|833|cysteinyl-tRNA synthetase##DQ890773|CARS|833|cysteinyl-tRNA synthetase##AK308005|CARS|833|cysteinyl-tRNA synthetase##AB208814|CARS|833|cysteinyl-tRNA synthetase##AF288206|CARS|833|cysteinyl-tRNA synthetase##AF288207|CARS|833|cysteinyl-tRNA synthetase##AK222614|CARS|833|cysteinyl-tRNA synthetase##AK296763|CARS|833|cysteinyl-tRNA synthetase##AK131221|CARS|833|cysteinyl-tRNA synthetase##AK096313|CARS|833|cysteinyl-tRNA synthetase##AK295371|CARS|833|cysteinyl-tRNA synthetase##AK298514|CARS|833|cysteinyl-tRNA synthetase##AK302644|CARS|833|cysteinyl-tRNA synthetase##BX647906|CARS|833|cysteinyl-tRNA synthetase##AK289432|CARS|833|cysteinyl-tRNA synthetase##BC002880|CARS|833|cysteinyl-tRNA synthetase##NM_001014437|CARS|833|cysteinyl-tRNA synthetase##NM_001194997|CARS|833|cysteinyl-tRNA synthetase##NM_001751|CARS|833|cysteinyl-tRNA synthetase##NM_139273|CARS|833|cysteinyl-tRNA synthetase##NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4##U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK301003|OSBPL5|114879|oxysterol binding protein-like 5##BC032646|OSBPL5|114879|oxysterol binding protein-like 5##BC039579|OSBPL5|114879|oxysterol binding protein-like 5##AF392453|OSBPL5|114879|oxysterol binding protein-like 5##AL136918|OSBPL5|114879|oxysterol binding protein-like 5##AK303205|OSBPL5|114879|oxysterol binding protein-like 5	0.399109	CTCF.p2:5:0.380
chr1	17803951	17804073	reg1018598.p1	6.969	+	TSC_hg19_v1_chr1_-_17766260 NM_018715	-37741	-	TSC_hg19_v1_chr1_-_17766174 AB040903	-37837	-	TSC_hg19_v1_chr1_-_17765069 BC053908 NM_001136204	-38951	-	TSC_hg19_v1_chr1_+_17846826 AK129959	42811	+	TSC_hg19_v1_chr1_+_17866365 AB046846 NM_018125 AK311076	62348	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	103003	+	NM_018715|RCC2|55920|regulator of chromosome condensation 2##AB040903|RCC2|55920|regulator of chromosome condensation 2##BC053908|RCC2|55920|regulator of chromosome condensation 2##NM_001136204|RCC2|55920|regulator of chromosome condensation 2##AK129959|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AB046846|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_018125|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK311076|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like	0.0	
chr2	201827913	201828093	reg1019732.p1	6.969	+	AY251943 AY251944 BC007654 NM_001142356 CU675739 DQ896612 AB463931 AL834430	-71284	+	NM_001136039 NM_001142355 TSC_hg19_v1_chr2_+_201754095 AF060513 AF283538 AK314709 NM_021824 AK225905 AB038949 AK023378 AF182416	-73885	+	TSC_hg19_v1_chr2_-_201753860 AF146799 AK297804 AF271652 AF251049 NM_032472 NM_130906 AF414127 AK027315 AY257468 BC007693	-74116	-	TSC_hg19_v1_chr2_-_201828407 AK316433 U40268 U27459 BC014834 AK302614 NM_006190	316	-	AL832234 TSC_hg19_v1_chr2_-_201936363	108355	-	TSC_hg19_v1_chr2_-_201936368 AL833403	108373	-	AY251943|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AY251944|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##BC007654|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_001142356|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##DQ896612|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AL834430|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_001136039|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_001142355|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF060513|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF283538|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AK314709|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##NM_021824|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AK225905|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AB038949|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AK023378|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF182416|NIF3L1|60491|NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)##AF146799|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AK297804|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AF271652|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AF251049|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##NM_032472|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##NM_130906|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AF414127|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AY257468|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##BC007693|PPIL3|53938|peptidylprolyl isomerase (cyclophilin)-like 3##AK316433|ORC2|4999|origin recognition complex, subunit 2##U40268|ORC2|4999|origin recognition complex, subunit 2##U27459|ORC2|4999|origin recognition complex, subunit 2##BC014834|ORC2|4999|origin recognition complex, subunit 2##AK302614|ORC2|4999|origin recognition complex, subunit 2##NM_006190|ORC2|4999|origin recognition complex, subunit 2##AL832234|FAM126B|285172|family with sequence similarity 126, member B##AL833403|FAM126B|285172|family with sequence similarity 126, member B	0.818898	CTCF.p2:34:0.819
chrX	108628126	108628245	reg1018404.p1	6.969	+	NM_003604 AF007567	-648563	-	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	-945101	+	BT007228 L22763 U04845 NM_001847 BC005305	-945522	-	NM_001522 L37378	97100	-	AK023289 NM_018698 BC120984 BC120985	150829	+	NM_001242617 TSC_hg19_v1_chrX_+_108780077 AF201942 BC014888 AF212223	151898	+	NM_003604|IRS4|8471|insulin receptor substrate 4##AF007567|IRS4|8471|insulin receptor substrate 4##BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##NM_001522|GUCY2F|2986|guanylate cyclase 2F, retinal##L37378|GUCY2F|2986|guanylate cyclase 2F, retinal##AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2##AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2##BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2##AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2	0.581819	CTCF.p2:43:0.582
chr11	5733867	5733997	reg1018524.p2	6.968	+	TSC_hg19_v1_chr11_+_5711025 AK308221 AK310098 AK311659 BC022281 AK298715 BC035582 AK290434 X82200 AK308796 AK301192	-22914	+	AK298934 NM_001199573 NM_006074 TSC_hg19_v1_chr11_+_5710861	-23086	+	TSC_hg19_v1_chr11_-_5706305 BC021258 BX647152 AK027593 NM_033034 NM_033092 NM_033093	-27669	-	AK122668 NM_001005180 BC137184 BC137185	23746	+	BC137035 BC137036 NM_001005175	41990	+	BC136979 BC136981 NM_001001922	65964	-	AK308221|TRIM22|10346|tripartite motif containing 22##AK310098|TRIM22|10346|tripartite motif containing 22##BC022281|TRIM22|10346|tripartite motif containing 22##AK298715|TRIM22|10346|tripartite motif containing 22##BC035582|TRIM22|10346|tripartite motif containing 22##AK290434|TRIM22|10346|tripartite motif containing 22##X82200|TRIM22|10346|tripartite motif containing 22##AK308796|TRIM22|10346|tripartite motif containing 22##AK301192|TRIM22|10346|tripartite motif containing 22##AK298934|TRIM22|10346|tripartite motif containing 22##NM_001199573|TRIM22|10346|tripartite motif containing 22##NM_006074|TRIM22|10346|tripartite motif containing 22##BC021258|TRIM5|85363|tripartite motif containing 5##BX647152|TRIM5|85363|tripartite motif containing 5##AK027593|TRIM5|85363|tripartite motif containing 5##NM_033034|TRIM5|85363|tripartite motif containing 5##NM_033092|TRIM5|85363|tripartite motif containing 5##NM_033093|TRIM5|85363|tripartite motif containing 5##AK122668|OR56B1|387748|olfactory receptor, family 56, subfamily B, member 1##NM_001005180|OR56B1|387748|olfactory receptor, family 56, subfamily B, member 1##BC137184|OR56B1|387748|olfactory receptor, family 56, subfamily B, member 1##BC137185|OR56B1|387748|olfactory receptor, family 56, subfamily B, member 1##BC137035|OR52N4|390072|olfactory receptor, family 52, subfamily N, member 4##BC137036|OR52N4|390072|olfactory receptor, family 52, subfamily N, member 4##NM_001005175|OR52N4|390072|olfactory receptor, family 52, subfamily N, member 4##BC136979|OR52N5|390075|olfactory receptor, family 52, subfamily N, member 5##BC136981|OR52N5|390075|olfactory receptor, family 52, subfamily N, member 5##NM_001001922|OR52N5|390075|olfactory receptor, family 52, subfamily N, member 5	0.778578	CTCF.p2:-6:0.779
chr1	241998172	241998297	reg1019011.p1	6.968	+	AK122927 NM_144625	-182655	+	TSC_hg19_v1_chr1_-_241803669 BC051900 AF140242 BC073872 BC062622 AF303588 BC036773 BC026242 NM_014322	-194759	-	BC117360 NM_001821 X64728	-199068	-	TSC_hg19_v1_chr1_+_242011520 NM_130398 AK291291	13270	+	BC007491 TSC_hg19_v1_chr1_+_242011556	13316	+	NM_003686 NM_006027 AF042282 AF091740 AF060479 AF084974	13851	+	AK122927|WDR64|128025|WD repeat domain 64##NM_144625|WDR64|128025|WD repeat domain 64##BC051900|OPN3|23596|opsin 3##AF140242|OPN3|23596|opsin 3##BC073872|OPN3|23596|opsin 3##BC062622|OPN3|23596|opsin 3##AF303588|OPN3|23596|opsin 3##BC036773|OPN3|23596|opsin 3##NM_014322|OPN3|23596|opsin 3##BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)##NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)##X64728|CHML|1122|choroideremia-like (Rab escort protein 2)##NM_130398|EXO1|9156|exonuclease 1##AK291291|EXO1|9156|exonuclease 1##BC007491|EXO1|9156|exonuclease 1##NM_003686|EXO1|9156|exonuclease 1##NM_006027|EXO1|9156|exonuclease 1##AF042282|EXO1|9156|exonuclease 1##AF091740|EXO1|9156|exonuclease 1##AF060479|EXO1|9156|exonuclease 1##AF084974|EXO1|9156|exonuclease 1	0.251939	CTCF.p2:26:0.252
chr15	45722739	45722912	reg1000021.p2	6.968	+	NM_032413 NM_197955 TSC_hg19_v1_chr15_+_45722808 AF228422 AK026298 BC021173 AB026707	-28	+	NM_024063 TSC_hg19_v1_chr15_+_45694551 AK291457 AK023232 AK225463 BC051861 BC000981 AK022348	-28273	+	TSC_hg19_v1_chr15_-_45670958 NM_001482	-51858	-	BC026089 NM_013309 TSC_hg19_v1_chr15_-_45815017	92185	-	AF080470 NM_012388 TSC_hg19_v1_chr15_+_45879539 AK091740	156661	+	TSC_hg19_v1_chr15_+_45879576 AK057545 BC004819 AK315581 AB527698	156782	+	NM_032413|C15orf48|84419|chromosome 15 open reading frame 48##NM_197955|C15orf48|84419|chromosome 15 open reading frame 48##AF228422|C15orf48|84419|chromosome 15 open reading frame 48##AK026298|C15orf48|84419|chromosome 15 open reading frame 48##BC021173|C15orf48|84419|chromosome 15 open reading frame 48##AB026707|C15orf48|84419|chromosome 15 open reading frame 48##NM_024063|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK291457|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK023232|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK225463|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC051861|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC000981|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK022348|SPATA5L1|79029|spermatogenesis associated 5-like 1##NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC026089|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##NM_013309|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##AF080470|PLDN|26258|pallidin homolog (mouse)##NM_012388|PLDN|26258|pallidin homolog (mouse)##AK057545|PLDN|26258|pallidin homolog (mouse)##BC004819|PLDN|26258|pallidin homolog (mouse)##AK315581|PLDN|26258|pallidin homolog (mouse)	0.017893	
chr2	96129237	96129353	reg1019798.p1	6.968	+	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	-60816	+	DQ148486 NM_001034914	-116528	+	TSC_hg19_v1_chr2_+_95963054 NM_013434 AB209076 AJ131730 AK095539 AK315437 BC012850 AF120102 AB528387 AF199599 AF367022 BT020075 CU680412 DQ148485 DQ892078 DQ895271 DQ895316	-166189	+	NM_001164464	21183	-	BC015353 NM_138800	128470	+	TSC_hg19_v1_chr2_-_96482383 BC117383 BC126153 AK057596	353150	-	AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##DQ148486|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_001034914|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_013434|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AJ131730|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK095539|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK315437|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC012850|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF120102|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF199599|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF367022|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BT020075|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ148485|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ892078|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895271|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895316|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_001164464|TRIM43B|653192|tripartite motif containing 43B##BC015353|TRIM43|129868|tripartite motif containing 43##NM_138800|TRIM43|129868|tripartite motif containing 43##AK057596|LINC00342|150759|long intergenic non-protein coding RNA 342	0.660271	CTCF.p2:12:0.660
chr5	33850392	33850567	reg1018689.p2	6.968	+	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	-409340	+	AK292346 TSC_hg19_v1_chr5_+_33440874 NM_152295	-409623	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	-1138674	+	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	41566	-	TSC_hg19_v1_chr5_-_33892294 AJ250725	41816	-	D88437 NM_016568	86011	+	AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##AK292346|TARS|6897|threonyl-tRNA synthetase##NM_152295|TARS|6897|threonyl-tRNA synthetase##BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##D88437|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##NM_016568|RXFP3|51289|relaxin/insulin-like family peptide receptor 3	0.0	
chr11	132812794	132812909	reg1018462.p2	6.967	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1031512	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-1032227	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-1572382	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	163	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	754	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	589463	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.282048	CTCF.p2:-25:0.253
chr7	100202419	100202543	reg1017129.p2	6.967	+	NM_002593 TSC_hg19_v1_chr7_+_100199985 AK313748 BC000574 L33799 AB008549 AK298364 BC033205 DQ891923 DQ895108	-2502	+	AK302252 NM_001163499 NM_012172 AK301864	-15258	+	TSC_hg19_v1_chr7_+_100183929 AK292240 NM_033506 BC032497 AK310487 AL136811 BC067293 BC051745	-18479	+	NM_001040097 TSC_hg19_v1_chr7_+_100209784	7288	+	TSC_hg19_v1_chr7_+_100210156 NM_001040098 NM_001040099 NM_023948 BC011653 BC009482 BC028475 BC005042	7591	+	TSC_hg19_v1_chr7_-_100230676 AK000421	28220	-	NM_002593|PCOLCE|5118|procollagen C-endopeptidase enhancer##AK313748|PCOLCE|5118|procollagen C-endopeptidase enhancer##BC000574|PCOLCE|5118|procollagen C-endopeptidase enhancer##L33799|PCOLCE|5118|procollagen C-endopeptidase enhancer##AB008549|PCOLCE|5118|procollagen C-endopeptidase enhancer##AK298364|PCOLCE|5118|procollagen C-endopeptidase enhancer##BC033205|PCOLCE|5118|procollagen C-endopeptidase enhancer##DQ891923|PCOLCE|5118|procollagen C-endopeptidase enhancer##DQ895108|PCOLCE|5118|procollagen C-endopeptidase enhancer##AK302252|FBXO24|26261|F-box protein 24##NM_001163499|FBXO24|26261|F-box protein 24##NM_012172|FBXO24|26261|F-box protein 24##AK301864|FBXO24|26261|F-box protein 24##AK292240|FBXO24|26261|F-box protein 24##NM_033506|FBXO24|26261|F-box protein 24##BC032497|FBXO24|26261|F-box protein 24##AK310487|FBXO24|26261|F-box protein 24##AL136811|FBXO24|26261|F-box protein 24##BC067293|FBXO24|26261|F-box protein 24##BC051745|FBXO24|26261|F-box protein 24##NM_001040097|MOSPD3|64598|motile sperm domain containing 3##NM_001040098|MOSPD3|64598|motile sperm domain containing 3##NM_001040099|MOSPD3|64598|motile sperm domain containing 3##NM_023948|MOSPD3|64598|motile sperm domain containing 3##BC011653|MOSPD3|64598|motile sperm domain containing 3##BC009482|MOSPD3|64598|motile sperm domain containing 3##BC028475|MOSPD3|64598|motile sperm domain containing 3##BC005042|MOSPD3|64598|motile sperm domain containing 3##AK000421|TFR2|7036|transferrin receptor 2	0.946472	CTCF.p2:-22:0.946
chr1	183549677	183549790	reg1019424.p2	6.966	+	TSC_hg19_v1_chr1_+_183441650 D87437 AB085674	-108063	+	AK297207 TSC_hg19_v1_chr1_+_183441641 AK299178 AK056035 AK091477 AX747010 BC036381 AK307394 AK074297	-108103	+	TSC_hg19_v1_chr1_+_183441464 NM_001174061 NM_173156 NM_201568 NM_201569	-108243	+	BT007439 AB590135 DQ893650 DQ895812 CU674784 AF527950 TSC_hg19_v1_chr1_-_183559595 AK296672 AK312666 AK298713	9825	-	TSC_hg19_v1_chr1_-_183559669 BC001606 NM_000433 NM_001190789 NM_001190794	9980	-	M32011 TSC_hg19_v1_chr1_-_183560049 NM_001127651	10299	-	D87437|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AB085674|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK297207|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK299178|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK056035|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK091477|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC036381|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK307394|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK074297|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001174061|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_173156|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_201568|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_201569|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##BT007439|NCF2|4688|neutrophil cytosolic factor 2##DQ893650|NCF2|4688|neutrophil cytosolic factor 2##DQ895812|NCF2|4688|neutrophil cytosolic factor 2##AF527950|NCF2|4688|neutrophil cytosolic factor 2##AK296672|NCF2|4688|neutrophil cytosolic factor 2##AK312666|NCF2|4688|neutrophil cytosolic factor 2##AK298713|NCF2|4688|neutrophil cytosolic factor 2##BC001606|NCF2|4688|neutrophil cytosolic factor 2##NM_000433|NCF2|4688|neutrophil cytosolic factor 2##NM_001190789|NCF2|4688|neutrophil cytosolic factor 2##NM_001190794|NCF2|4688|neutrophil cytosolic factor 2##M32011|NCF2|4688|neutrophil cytosolic factor 2##NM_001127651|NCF2|4688|neutrophil cytosolic factor 2	0.0	
chr12	16539118	16539242	reg1021151.p1	6.966	+	J03746 NM_145764	-32830	+	TSC_hg19_v1_chr12_+_16500585 BC062473 NM_020300 AK291148 AK309707 BC005923 BC056863 NM_145791	-38561	+	NM_145792	-39105	+	TSC_hg19_v1_chr12_-_16757958 AK294651 AB044745	218832	-	NM_001243611 TSC_hg19_v1_chr12_-_16758338	219145	-	AK316021 AK294474 NM_001243612	219691	-	J03746|MGST1|4257|microsomal glutathione S-transferase 1##NM_145764|MGST1|4257|microsomal glutathione S-transferase 1##NM_020300|MGST1|4257|microsomal glutathione S-transferase 1##AK291148|MGST1|4257|microsomal glutathione S-transferase 1##AK309707|MGST1|4257|microsomal glutathione S-transferase 1##BC005923|MGST1|4257|microsomal glutathione S-transferase 1##BC056863|MGST1|4257|microsomal glutathione S-transferase 1##NM_145791|MGST1|4257|microsomal glutathione S-transferase 1##NM_145792|MGST1|4257|microsomal glutathione S-transferase 1##AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243611|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK316021|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294474|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243612|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	0.277828	CTCF.p2:-14:0.278
chr3	74316888	74316995	reg1020662.p2	6.966	+	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-642903	-	BC051316 BC064501 NM_018029	-1206132	+	TSC_hg19_v1_chr3_+_73046081 AF327345 NM_174907 BC128136 BC128137	-1270821	+	AB384611 BC150608 NM_020872	253361	-	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	1167208	-	AK000525 NM_001124759	1396542	+	BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C	0.663616	CTCF.p2:0:0.664
chr5	92398390	92398533	reg1023153.p1	6.964	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-1719329	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-1722299	+	AK091866 TSC_hg19_v1_chr5_-_90610220	-1788216	-	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	518502	-	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	520522	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	522207	+	BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	0.857073	CTCF.p2:-11:0.857
chr16	71598942	71599051	reg1019725.p2	6.963	+	NM_005769 AF131235 NM_001166395 AK026635 AK074746	-38903	+	AK292260 BC030658 AK057330 BC047091 NM_006961	-75781	-	AK123826 TSC_hg19_v1_chr16_+_71496196	-102808	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	11976	-	BC005052 NM_001017967 NM_052858 AK307585 BC011893 BC013376 AK056842 AK292185 CU680584	61101	+	AB463166 AM393067 AM393542 BC129927 BC129983 NM_015020	149704	-	NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19##X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase##BC005052|MARVELD3|91862|MARVEL domain containing 3##NM_001017967|MARVELD3|91862|MARVEL domain containing 3##NM_052858|MARVELD3|91862|MARVEL domain containing 3##AK307585|MARVELD3|91862|MARVEL domain containing 3##BC011893|MARVELD3|91862|MARVEL domain containing 3##BC013376|MARVELD3|91862|MARVEL domain containing 3##AK056842|MARVELD3|91862|MARVEL domain containing 3##AK292185|MARVELD3|91862|MARVEL domain containing 3##AM393067|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AM393542|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129927|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129983|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##NM_015020|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2	0.0	
chr4	139498022	139498137	reg1020919.p1	6.963	+	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	-334715	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-1044437	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-1044487	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	438914	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	507324	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	507532	-	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.858488	CTCF.p2:6:0.858
chr4	54520039	54520185	reg1018851.p2	6.963	+	AK056823 NM_001126328 TSC_hg19_v1_chr4_-_54457761	-62368	-	BC022983 TSC_hg19_v1_chr4_-_54457654	-62469	-	TSC_hg19_v1_chr4_-_54424402 NM_032622	-95694	-	AB463552 DQ890711 DQ893893 TSC_hg19_v1_chr4_-_54930576	410414	-	TSC_hg19_v1_chr4_-_54930764 AF159423 BC034691	410623	-	TSC_hg19_v1_chr4_-_54930773 AK312427 NM_012110	410685	-	AK056823|LNX1|84708|ligand of numb-protein X 1##NM_001126328|LNX1|84708|ligand of numb-protein X 1##BC022983|LNX1|84708|ligand of numb-protein X 1##NM_032622|LNX1|84708|ligand of numb-protein X 1##DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2##DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2##AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2##BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2##AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	0.179398	
chr15	20226747	20226873	reg1023710.p1	6.962	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	484627	-	NM_001145004	520303	-	NM_207355 BC066981	845168	-	BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B	0.842307	CTCF.p2:5:0.842
chr2	210825866	210825986	reg1020785.p2	6.962	+	TSC_hg19_v1_chr2_+_210636732 BC136690 BC136693	-189190	+	TSC_hg19_v1_chr2_+_210636707 AK090815 AX746629 NM_032504 NM_182587	-189218	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	-381532	+	TSC_hg19_v1_chr2_+_210867347 BC063135 AK056028 NM_006916	41410	+	BC016764 TSC_hg19_v1_chr2_+_210867366 AK093658 AX748246 AK291035 AK303184 AL833120 AK096199 AK308741 BC072401 BC005148 NM_199229 AB528699 EU831915 EU832009	41444	+	TSC_hg19_v1_chr2_-_211018294 AK074441 BC070141	192415	-	BC136690|UNC80|285175|unc-80 homolog (C. elegans)##BC136693|UNC80|285175|unc-80 homolog (C. elegans)##AK090815|UNC80|285175|unc-80 homolog (C. elegans)##NM_032504|UNC80|285175|unc-80 homolog (C. elegans)##NM_182587|UNC80|285175|unc-80 homolog (C. elegans)##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2##BC063135|RPE|6120|ribulose-5-phosphate-3-epimerase##AK056028|RPE|6120|ribulose-5-phosphate-3-epimerase##NM_006916|RPE|6120|ribulose-5-phosphate-3-epimerase##BC016764|RPE|6120|ribulose-5-phosphate-3-epimerase##AK093658|RPE|6120|ribulose-5-phosphate-3-epimerase##AK291035|RPE|6120|ribulose-5-phosphate-3-epimerase##AK303184|RPE|6120|ribulose-5-phosphate-3-epimerase##AL833120|RPE|6120|ribulose-5-phosphate-3-epimerase##AK096199|RPE|6120|ribulose-5-phosphate-3-epimerase##AK308741|RPE|6120|ribulose-5-phosphate-3-epimerase##BC072401|RPE|6120|ribulose-5-phosphate-3-epimerase##BC005148|RPE|6120|ribulose-5-phosphate-3-epimerase##NM_199229|RPE|6120|ribulose-5-phosphate-3-epimerase##EU831915|RPE|6120|ribulose-5-phosphate-3-epimerase##EU832009|RPE|6120|ribulose-5-phosphate-3-epimerase##AK074441|C2orf67|151050|chromosome 2 open reading frame 67##BC070141|C2orf67|151050|chromosome 2 open reading frame 67	0.837229	CTCF.p2:14:0.837
chr6_cox_hap2	3870410	3870547	reg1014939.p2	6.962	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.943967	
chrUn_gl000217	3141	3227	reg1018619.p1	6.962	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.802197	CTCF.p2:24:0.802
chr10	15944698	15944820	reg1019899.p1	6.961	+	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	-42268	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	-182966	-	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	-531610	-	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	534226	+	NM_001010908	619244	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	914600	-	BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related##NM_001010908|C1QL3|389941|complement component 1, q subcomponent-like 3##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1	0.968506	CTCF.p2:13:0.969
chr19	42969996	42970140	reg1019375.p1	6.961	+	BC093946 BC112095 AK292985 AY358433 NM_198477 AY598464	-22944	-	AK309893 AK292482 BC029961 BC070041 NM_005357 U40002	-38530	-	TSC_hg19_v1_chr19_-_42928157 BC029301	-41855	-	X16356 TSC_hg19_v1_chr19_-_43031473	61341	-	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	62524	-	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	128962	-	BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17##BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17##NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292482|LIPE|3991|lipase, hormone-sensitive##BC029961|LIPE|3991|lipase, hormone-sensitive##BC070041|LIPE|3991|lipase, hormone-sensitive##NM_005357|LIPE|3991|lipase, hormone-sensitive##U40002|LIPE|3991|lipase, hormone-sensitive##BC029301|LIPE|3991|lipase, hormone-sensitive##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8	0.0	
chr6	44067960	44068079	reg1019681.p1	6.961	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	-99645	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-329149	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-329485	+	CR627460 TSC_hg19_v1_chr6_+_44094741	26679	+	TSC_hg19_v1_chr6_-_44095161 AK312086	27141	-	TSC_hg19_v1_chr6_-_44095190 NM_032111	27179	-	BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14##NM_032111|MRPL14|64928|mitochondrial ribosomal protein L14	0.256163	CTCF.p2:-33:0.256
chr7	148765107	148765233	reg1024309.p1	6.961	+	TSC_hg19_v1_chr7_-_148725766 NM_004911	-39398	-	BC006344 BC011754 AK313299 TSC_hg19_v1_chr7_-_148725753	-39427	-	CU674214 DQ893573 DQ894347 TSC_hg19_v1_chr7_-_148725561 BC000425 BC001928 J05016 AK290971	-39615	-	AB463377 AM392873 AM392921 TSC_hg19_v1_chr7_-_148787811 BC109245 BC128392 AL834510 AK297472	22602	-	TSC_hg19_v1_chr7_-_148787844 BX647929 AK095701	22663	-	TSC_hg19_v1_chr7_-_148787872 NM_152411	22730	-	NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4##BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4##BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4##AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4##DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4##DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4##BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4##BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4##AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4##AM392873|ZNF786|136051|zinc finger protein 786##AM392921|ZNF786|136051|zinc finger protein 786##BC109245|ZNF786|136051|zinc finger protein 786##BC128392|ZNF786|136051|zinc finger protein 786##AL834510|ZNF786|136051|zinc finger protein 786##AK297472|ZNF786|136051|zinc finger protein 786##BX647929|ZNF786|136051|zinc finger protein 786##AK095701|ZNF786|136051|zinc finger protein 786##NM_152411|ZNF786|136051|zinc finger protein 786	0.07335	
chr12	111769109	111769241	reg1020668.p2	6.960	+	BC151245 NM_015267 AB006631 AF271236	-297303	+	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	-410797	-	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-484372	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	37671	-	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	37735	-	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	74574	+	BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3	0.9934	CTCF.p2:-9:0.993
chr13	52423922	52424058	reg1020387.p2	6.960	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	-45715	-	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-265255	+	TSC_hg19_v1_chr13_+_52158639 BC014004	-265349	+	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	12204	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	161560	-	TSC_hg19_v1_chr13_+_52586546 NM_001004127 BC142998 AK296747 AK092428 AX747540 BC108677 BC111022 AK025456 BC143059 BC150316	162545	+	BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##BC014004|WDFY2|115825|WD repeat and FYVE domain containing 2##AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	0.939834	CTCF.p2:-5:0.940
chr19	1503586	1503710	reg1018561.p2	6.960	+	TSC_hg19_v1_chr19_+_1491191 AX775999 BC008201 NM_138393 AK058112 AK315744 AK293919 CU678889 AY562244	-12514	+	AK302079 AY358963 NM_017573 BC142942 TSC_hg19_v1_chr19_-_1490440	-13226	-	AK057235 TSC_hg19_v1_chr19_-_1490352	-13302	-	TSC_hg19_v1_chr19_-_1513019 AK302020 AK131571	9366	-	BC040620 NM_213604	9539	-	AK054808 NM_001243079	20424	+	AX775999|REEP6|92840|receptor accessory protein 6##BC008201|REEP6|92840|receptor accessory protein 6##NM_138393|REEP6|92840|receptor accessory protein 6##AK058112|REEP6|92840|receptor accessory protein 6##AK315744|REEP6|92840|receptor accessory protein 6##AK293919|REEP6|92840|receptor accessory protein 6##AY562244|REEP6|92840|receptor accessory protein 6##AK302079|PCSK4|54760|proprotein convertase subtilisin/kexin type 4##AY358963|PCSK4|54760|proprotein convertase subtilisin/kexin type 4##NM_017573|PCSK4|54760|proprotein convertase subtilisin/kexin type 4##BC142942|PCSK4|54760|proprotein convertase subtilisin/kexin type 4##AK057235|PCSK4|54760|proprotein convertase subtilisin/kexin type 4##AK302020|ADAMTSL5|339366|ADAMTS-like 5##AK131571|ADAMTSL5|339366|ADAMTS-like 5##BC040620|ADAMTSL5|339366|ADAMTS-like 5##NM_213604|ADAMTSL5|339366|ADAMTS-like 5##AK054808|PLK5|126520|polo-like kinase 5##NM_001243079|PLK5|126520|polo-like kinase 5	0.997618	CTCF.p2:-6:0.998
chr22	30684177	30684277	reg1000562.p4	6.960	+	CR541703 AB463155 CU013134 CU013422 DQ892537 DQ895748 CR456534 BC011589 NM_020530 TSC_hg19_v1_chr22_-_30662841	-21412	-	AB527710 X13967 BC093733 BC093735 BC143305 BC069540 TSC_hg19_v1_chr22_-_30642749 AK315310 NM_002309	-41488	-	BC030013 NM_152510	-207775	+	CU013000 CU013288 CU692418 AB528172 BC021927 AK309436 AK055587 TSC_hg19_v1_chr22_-_30685566 CR456449 AK310246 NM_001037666	1323	-	TSC_hg19_v1_chr22_-_30722928 AB449894 AB590468 BC143051 BC143052 BC150187 CT841514 BC150214 AK127939 AF331038 BC022201 BC136815 BC171775 AK074656 BC142940 NM_001204240 NM_031937	38700	-	TSC_hg19_v1_chr22_+_30752612 BC018040 NM_001017437	68392	+	CR541703|OSM|5008|oncostatin M##CU013134|OSM|5008|oncostatin M##CU013422|OSM|5008|oncostatin M##DQ892537|OSM|5008|oncostatin M##DQ895748|OSM|5008|oncostatin M##CR456534|OSM|5008|oncostatin M##BC011589|OSM|5008|oncostatin M##NM_020530|OSM|5008|oncostatin M##X13967|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093733|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093735|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC143305|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC069540|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AK315310|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##NM_002309|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC030013|HORMAD2|150280|HORMA domain containing 2##NM_152510|HORMAD2|150280|HORMA domain containing 2##CU013000|GATSL3|652968|GATS protein-like 3##CU013288|GATSL3|652968|GATS protein-like 3##BC021927|GATSL3|652968|GATS protein-like 3##AK309436|GATSL3|652968|GATS protein-like 3##AK055587|GATSL3|652968|GATS protein-like 3##CR456449|GATSL3|652968|GATS protein-like 3##AK310246|GATSL3|652968|GATS protein-like 3##NM_001037666|GATSL3|652968|GATS protein-like 3##AB449894|TBC1D10A|83874|TBC1 domain family, member 10A##BC143051|TBC1D10A|83874|TBC1 domain family, member 10A##BC143052|TBC1D10A|83874|TBC1 domain family, member 10A##BC150187|TBC1D10A|83874|TBC1 domain family, member 10A##CT841514|TBC1D10A|83874|TBC1 domain family, member 10A##BC150214|TBC1D10A|83874|TBC1 domain family, member 10A##AK127939|TBC1D10A|83874|TBC1 domain family, member 10A##AF331038|TBC1D10A|83874|TBC1 domain family, member 10A##BC022201|TBC1D10A|83874|TBC1 domain family, member 10A##BC136815|TBC1D10A|83874|TBC1 domain family, member 10A##BC171775|TBC1D10A|83874|TBC1 domain family, member 10A##AK074656|TBC1D10A|83874|TBC1 domain family, member 10A##BC142940|TBC1D10A|83874|TBC1 domain family, member 10A##NM_001204240|TBC1D10A|83874|TBC1 domain family, member 10A##NM_031937|TBC1D10A|83874|TBC1 domain family, member 10A##BC018040|CCDC157|550631|coiled-coil domain containing 157##NM_001017437|CCDC157|550631|coiled-coil domain containing 157	0.0	
chr2	211367856	211367971	reg1018772.p1	6.959	+	NM_001122633 AB208800	-25495	+	TSC_hg19_v1_chr2_-_211341454 AK294674 BC028685 NM_001136574 Y11395 AK309295 AK312381 NM_006055 NM_001136575	-26460	-	AB527940 CR456869 TSC_hg19_v1_chr2_-_211179896 NM_079420 AK311942	-188074	-	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	53476	+	AK316425 NM_001122634 AK302778 AY317138	90172	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	2035402	-	NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK294674|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##BC028685|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_001136574|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##Y11395|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##AK309295|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##AK312381|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_006055|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_001136575|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	1.008762	CTCF.p2:4:0.998
chr9	34612927	34613023	reg1019095.p2	6.959	+	BC032136 NM_148178 NM_148179	-883	-	NM_001207011 TSC_hg19_v1_chr9_-_34590150	-22825	-	TSC_hg19_v1_chr9_-_34589723 BC001492 M73238 NM_001842 NM_147164	-23236	-	AB463589 CR541889 CU674154 DQ891980 EU176665 TSC_hg19_v1_chr9_-_34620472 BC000319 BC003004 AF082513	7496	-	TSC_hg19_v1_chr9_-_34620483 BC107697 AK314730	7510	-	TSC_hg19_v1_chr9_-_34620493 NM_007234 NM_024348	7518	-	BC032136|C9orf23|138716|chromosome 9 open reading frame 23##NM_148178|C9orf23|138716|chromosome 9 open reading frame 23##NM_148179|C9orf23|138716|chromosome 9 open reading frame 23##NM_001207011|CNTFR|1271|ciliary neurotrophic factor receptor##BC001492|CNTFR|1271|ciliary neurotrophic factor receptor##M73238|CNTFR|1271|ciliary neurotrophic factor receptor##NM_001842|CNTFR|1271|ciliary neurotrophic factor receptor##NM_147164|CNTFR|1271|ciliary neurotrophic factor receptor##CR541889|DCTN3|11258|dynactin 3 (p22)##DQ891980|DCTN3|11258|dynactin 3 (p22)##EU176665|DCTN3|11258|dynactin 3 (p22)##BC000319|DCTN3|11258|dynactin 3 (p22)##BC003004|DCTN3|11258|dynactin 3 (p22)##AF082513|DCTN3|11258|dynactin 3 (p22)##BC107697|DCTN3|11258|dynactin 3 (p22)##AK314730|DCTN3|11258|dynactin 3 (p22)##NM_007234|DCTN3|11258|dynactin 3 (p22)##NM_024348|DCTN3|11258|dynactin 3 (p22)	0.998598	CTCF.p2:6:0.999
chr14	33901749	33901858	reg1020398.p1	6.958	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-493313	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1103267	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-1355297	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	518346	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	1029684	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	1107082	-	AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein	0.777506	CTCF.p2:7:0.778
chr19	47253508	47253611	reg1020336.p1	6.958	+	TSC_hg19_v1_chr19_-_47249708 NM_001039877 NM_013403	-3846	-	TSC_hg19_v1_chr19_-_47249688 AF212940 AB527410 BC034604	-3865	-	BC014278 AB209003 TSC_hg19_v1_chr19_-_47249674	-3904	-	TSC_hg19_v1_chr19_-_47288122 AK316546 AK299137 NM_001145145 AK055630	34541	-	AK293433 AK301661 NM_001145144	36983	-	AF334818 GQ919058 AB527629 CU674018 DQ892148 DQ895345 AF102826 TSC_hg19_v1_chr19_-_47291260 BC000062 AK125222	37714	-	NM_001039877|STRN4|29888|striatin, calmodulin binding protein 4##NM_013403|STRN4|29888|striatin, calmodulin binding protein 4##AF212940|STRN4|29888|striatin, calmodulin binding protein 4##BC034604|STRN4|29888|striatin, calmodulin binding protein 4##BC014278|STRN4|29888|striatin, calmodulin binding protein 4##AB209003|STRN4|29888|striatin, calmodulin binding protein 4##AK316546|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK299137|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145145|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK055630|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK293433|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK301661|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145144|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF334818|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##GQ919058|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ892148|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ895345|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF102826|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC000062|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK125222|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5	0.992962	CTCF.p2:-2:0.993
chr8	33101823	33102003	reg1020308.p2	6.958	+	TSC_hg19_v1_chr8_+_32785485 BC034319	-316424	+	NM_001159996 AK293270 AK293240	-522521	+	AK289927 NM_013959	-597663	+	TSC_hg19_v1_chr8_-_33330616 BC004884	228700	-	AK098505 AK297132 TSC_hg19_v1_chr8_-_33330636 AK303231 AJ512465 AJ535838 AJ535839 AK292993 AJ582015 NM_032664	228733	-	NM_032509 TSC_hg19_v1_chr8_+_33342703 AK314491 AK225476 AK027469 BC015965 AF251062 BC039740 BC028230 BC050528 CU690708	240791	+	NM_001159996|NRG1|3084|neuregulin 1##AK293270|NRG1|3084|neuregulin 1##AK293240|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1##BC004884|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK098505|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK297132|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK303231|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ512465|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535838|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535839|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK292993|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ582015|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032664|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032509|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK314491|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK225476|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK027469|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC015965|MAK16|84549|MAK16 homolog (S. cerevisiae)##AF251062|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC039740|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC028230|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC050528|MAK16|84549|MAK16 homolog (S. cerevisiae)	0.787768	CTCF.p2:-9:0.788
chr1	156880150	156880258	reg1019225.p1	6.957	+	NM_001080471	-16682	+	M23102 TSC_hg19_v1_chr1_+_156830655 BC136554 BC144239 NM_001012331 NM_002529 AK290759 AK312704 BC062580	-49538	+	AF064078 AK310760 NM_014215	-51516	-	AK292342 NM_144702 BC033790	10228	+	BC057394 NM_014784 NM_198236	134957	-	AK131392 NM_001004341	189395	-	NM_001080471|PEAR1|375033|platelet endothelial aggregation receptor 1##M23102|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC136554|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC144239|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001012331|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_002529|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK290759|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK312704|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC062580|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AF064078|INSRR|3645|insulin receptor-related receptor##AK310760|INSRR|3645|insulin receptor-related receptor##NM_014215|INSRR|3645|insulin receptor-related receptor##AK292342|LRRC71|149499|leucine rich repeat containing 71##NM_144702|LRRC71|149499|leucine rich repeat containing 71##BC033790|LRRC71|149499|leucine rich repeat containing 71##BC057394|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_014784|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_198236|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like	0.999378	CTCF.p2:7:0.999
chr15	66790138	66790288	reg1018424.p1	6.957	+	AF093593 AB464224 AK292051 TSC_hg19_v1_chr15_-_66790104 BC014315 AK024763 AK312018 NM_006049	-107	-	TSC_hg19_v1_chr15_+_66694219 AK294322	-95996	+	TSC_hg19_v1_chr15_+_66679272 AK291500 AK312356	-110940	+	L20868 BC005817 BC009888 BC014653 BC010151 BC007996 BC040610 AB208977 BC001365 BC018840 BC095427 TSC_hg19_v1_chr15_-_66797186 AK297490 AK291117 AK297484 AK130784 AK223057 AK291859 AK294113 AK298224 BC066925 D23660 NM_000968	6959	-	AK023175 NM_017975 BX640701	7229	+	AK122787 TSC_hg19_v1_chr15_+_66797663 AK291048 BC090041 BC036900	7445	+	AF093593|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##AK292051|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##BC014315|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##AK024763|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##AK312018|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##NM_006049|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##AK294322|MAP2K1|5604|mitogen-activated protein kinase kinase 1##AK291500|MAP2K1|5604|mitogen-activated protein kinase kinase 1##AK312356|MAP2K1|5604|mitogen-activated protein kinase kinase 1##L20868|RPL4|6124|ribosomal protein L4##BC005817|RPL4|6124|ribosomal protein L4##BC009888|RPL4|6124|ribosomal protein L4##BC014653|RPL4|6124|ribosomal protein L4##BC010151|RPL4|6124|ribosomal protein L4##BC007996|RPL4|6124|ribosomal protein L4##BC040610|RPL4|6124|ribosomal protein L4##AB208977|RPL4|6124|ribosomal protein L4##BC001365|RPL4|6124|ribosomal protein L4##BC018840|RPL4|6124|ribosomal protein L4##BC095427|RPL4|6124|ribosomal protein L4##AK291117|RPL4|6124|ribosomal protein L4##AK297484|RPL4|6124|ribosomal protein L4##AK130784|RPL4|6124|ribosomal protein L4##AK223057|RPL4|6124|ribosomal protein L4##AK291859|RPL4|6124|ribosomal protein L4##AK294113|RPL4|6124|ribosomal protein L4##BC066925|RPL4|6124|ribosomal protein L4##D23660|RPL4|6124|ribosomal protein L4##NM_000968|RPL4|6124|ribosomal protein L4##AK023175|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##NM_017975|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BX640701|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AK122787|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AK291048|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC090041|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC036900|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)	0.730912	CTCF.p2:-4:0.731
chr16	52016798	52016885	reg1018236.p2	6.957	+	BC113881 BC113906 BC131548 Y18265 TSC_hg19_v1_chr16_-_51185251 AK295103 NM_002968	-831429	-	AK307835 NM_001127892	-832334	-	TSC_hg19_v1_chr16_+_50776066 AF161542 NM_001042412 BC012342	-1240783	+	NM_001242473	91005	-	NM_001080430	563964	-	AK299202 NM_001146188	564872	-	BC113881|SALL1|6299|sal-like 1 (Drosophila)##BC113906|SALL1|6299|sal-like 1 (Drosophila)##BC131548|SALL1|6299|sal-like 1 (Drosophila)##Y18265|SALL1|6299|sal-like 1 (Drosophila)##AK295103|SALL1|6299|sal-like 1 (Drosophila)##NM_002968|SALL1|6299|sal-like 1 (Drosophila)##AK307835|SALL1|6299|sal-like 1 (Drosophila)##NM_001127892|SALL1|6299|sal-like 1 (Drosophila)##AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)##BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001242473|LOC388276|388276|hCG2045437##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3	0.999628	CTCF.p2:-7:1.000
chr11	36063705	36063821	reg1020014.p1	6.956	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	-98152	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-379090	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-379313	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	247190	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	247223	-	NM_001160167 AK055042	254017	+	BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9##NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like	0.963909	CTCF.p2:-13:0.964
chr12	123755735	123755822	reg1020903.p1	6.956	+	NM_001143905	-37488	+	NM_152269 TSC_hg19_v1_chr12_+_123717982 BC020885 BC062329 AF061733 AK025908 NM_001194995 BC018145	-37828	+	TSC_hg19_v1_chr12_-_123717684 AK096541	-38114	-	DQ891281 DQ894468 BC034717 TSC_hg19_v1_chr12_-_123756363 AB006077 AF006484 NM_004642	715	-	AY364255 AB014772 BC129949 BC133704 NM_001167856 NM_018183	79207	-	BC030544 TSC_hg19_v1_chr12_-_123849386 AK001695 AK307488	93615	-	NM_001143905|C12orf65|91574|chromosome 12 open reading frame 65##NM_152269|C12orf65|91574|chromosome 12 open reading frame 65##BC020885|C12orf65|91574|chromosome 12 open reading frame 65##BC062329|C12orf65|91574|chromosome 12 open reading frame 65##AF061733|C12orf65|91574|chromosome 12 open reading frame 65##AK025908|C12orf65|91574|chromosome 12 open reading frame 65##NM_001194995|C12orf65|91574|chromosome 12 open reading frame 65##BC018145|C12orf65|91574|chromosome 12 open reading frame 65##AK096541|MPHOSPH9|10198|M-phase phosphoprotein 9##DQ891281|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##DQ894468|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##BC034717|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##AB006077|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##AF006484|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##NM_004642|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##AY364255|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AB014772|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##BC129949|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##BC133704|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##NM_001167856|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##NM_018183|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##BC030544|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AK001695|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AK307488|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	0.0	
chr11	62013097	62013242	reg1020775.p2	6.955	+	NM_006551 BC069290 BC104840 BC104838	-3429	+	AF071219 NM_002407 BC062218 AJ224173	-37018	+	BC062693 AJ224171 BC069170 BC069289 NM_006552	-55471	+	BC067220 NM_002411 U33147 BC128252 BC128402 AY217100	24489	+	HQ258026 AY236538 BC130639 BC130645 AY359052 NM_206998	53340	-	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	91656	+	NM_006551|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC069290|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104840|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104838|SCGB1D2|10647|secretoglobin, family 1D, member 2##AF071219|SCGB2A1|4246|secretoglobin, family 2A, member 1##NM_002407|SCGB2A1|4246|secretoglobin, family 2A, member 1##BC062218|SCGB2A1|4246|secretoglobin, family 2A, member 1##AJ224173|SCGB2A1|4246|secretoglobin, family 2A, member 1##BC062693|SCGB1D1|10648|secretoglobin, family 1D, member 1##AJ224171|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069170|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069289|SCGB1D1|10648|secretoglobin, family 1D, member 1##NM_006552|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC067220|SCGB2A2|4250|secretoglobin, family 2A, member 2##NM_002411|SCGB2A2|4250|secretoglobin, family 2A, member 2##U33147|SCGB2A2|4250|secretoglobin, family 2A, member 2##BC128252|SCGB2A2|4250|secretoglobin, family 2A, member 2##BC128402|SCGB2A2|4250|secretoglobin, family 2A, member 2##AY217100|SCGB2A2|4250|secretoglobin, family 2A, member 2##HQ258026|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY236538|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130639|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130645|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY359052|SCGB1D4|404552|secretoglobin, family 1D, member 4##NM_206998|SCGB1D4|404552|secretoglobin, family 1D, member 4##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1	0.017573	
chr12	133387192	133387294	reg1021070.p1	6.955	+	BC048203 TSC_hg19_v1_chr12_-_133372555	-14686	-	TSC_hg19_v1_chr12_-_133338419 BC043157 NM_015114	-48823	-	AK025933 TSC_hg19_v1_chr12_-_133306584	-80685	-	TSC_hg19_v1_chr12_-_133404955 D63997 AB027133	17736	-	TSC_hg19_v1_chr12_-_133405400 NM_005895	18055	-	TSC_hg19_v1_chr12_-_133405429 BC142658 BC146675 NM_001172557 BC060826	18219	-	BC043157|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##NM_015114|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##AK025933|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##D63997|GOLGA3|2802|golgin A3##AB027133|GOLGA3|2802|golgin A3##NM_005895|GOLGA3|2802|golgin A3##BC142658|GOLGA3|2802|golgin A3##BC146675|GOLGA3|2802|golgin A3##NM_001172557|GOLGA3|2802|golgin A3##BC060826|GOLGA3|2802|golgin A3	0.830068	CTCF.p2:-6:0.830
chr18	42792708	42792832	reg1002062.p1	6.955	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-531902	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-532656	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1935341	-	NM_001242692 AK292422	182	+	AF349446 NM_007163	401995	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	511334	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.0	
chr19	30364409	30364511	reg1003645.p1	6.955	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	-61559	+	TSC_hg19_v1_chr19_-_30206402 NM_031448	-158038	-	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	-158368	-	BC026184 NM_001252641	50090	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	68822	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	498920	+	AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536	0.0	
chr20	44728320	44728443	reg1021771.p1	6.955	+	TSC_hg19_v1_chr20_-_44718581 NM_020967	-9770	-	TSC_hg19_v1_chr20_-_44718561 AF230533	-9828	-	TSC_hg19_v1_chr20_-_44718529 BC056872	-9857	-	TSC_hg19_v1_chr20_+_44746923 NM_001250 NM_152854 BC064518 BC012419 X60592	18535	+	TSC_hg19_v1_chr20_+_44746952 AK222896 AJ300189 AB209660 AB590222 AX781593 AY225405 BT019901 DQ891804 DQ894988	18584	+	BC136526 NM_021248	151947	-	NM_020967|NCOA5|57727|nuclear receptor coactivator 5##AF230533|NCOA5|57727|nuclear receptor coactivator 5##BC056872|NCOA5|57727|nuclear receptor coactivator 5##NM_001250|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_152854|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC064518|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC012419|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AK222896|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AJ300189|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AB209660|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AY225405|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BT019901|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ891804|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ894988|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC136526|CDH22|64405|cadherin 22, type 2##NM_021248|CDH22|64405|cadherin 22, type 2	0.0	
chr3	10024720	10024870	reg1020810.p1	6.955	+	BC089447 AK296317 TSC_hg19_v1_chr3_-_9994093 AY358158 AK090993 AX746722 BC040508 NM_207351	-30717	-	TSC_hg19_v1_chr3_+_9975538 AL050275 NM_015513 NM_001031717 NM_001077415 BC008720 AY358363 AK314113	-49249	+	NM_001203263 NM_001203264 NM_001203265 NM_032732 NM_153460 AK092907 AK290670 AK294616 AK295377 AK315024 AX747801 AY359098 NM_153461 AK075534 AK096824 AK308241 AF458065 BC006411 AK225650 AY358840 AK315053 AK303171 EF676032	-65994	+	CU692722 TSC_hg19_v1_chr3_-_10028505 BC022807	3630	-	BC010883 TSC_hg19_v1_chr3_-_10028526 AK312008 AK172843 AF157321 AK222953 NM_018447	3731	-	TSC_hg19_v1_chr3_+_10028599 AK092352 AX747493	3795	+	BC089447|PRRT3|285368|proline-rich transmembrane protein 3##AY358158|PRRT3|285368|proline-rich transmembrane protein 3##AK090993|PRRT3|285368|proline-rich transmembrane protein 3##BC040508|PRRT3|285368|proline-rich transmembrane protein 3##NM_207351|PRRT3|285368|proline-rich transmembrane protein 3##AL050275|CRELD1|78987|cysteine-rich with EGF-like domains 1##NM_015513|CRELD1|78987|cysteine-rich with EGF-like domains 1##NM_001031717|CRELD1|78987|cysteine-rich with EGF-like domains 1##NM_001077415|CRELD1|78987|cysteine-rich with EGF-like domains 1##BC008720|CRELD1|78987|cysteine-rich with EGF-like domains 1##AY358363|CRELD1|78987|cysteine-rich with EGF-like domains 1##AK314113|CRELD1|78987|cysteine-rich with EGF-like domains 1##NM_001203263|IL17RC|84818|interleukin 17 receptor C##NM_001203264|IL17RC|84818|interleukin 17 receptor C##NM_001203265|IL17RC|84818|interleukin 17 receptor C##NM_032732|IL17RC|84818|interleukin 17 receptor C##NM_153460|IL17RC|84818|interleukin 17 receptor C##AK092907|IL17RC|84818|interleukin 17 receptor C##AK290670|IL17RC|84818|interleukin 17 receptor C##AK294616|IL17RC|84818|interleukin 17 receptor C##AK295377|IL17RC|84818|interleukin 17 receptor C##AK315024|IL17RC|84818|interleukin 17 receptor C##AY359098|IL17RC|84818|interleukin 17 receptor C##NM_153461|IL17RC|84818|interleukin 17 receptor C##AK075534|IL17RC|84818|interleukin 17 receptor C##AK096824|IL17RC|84818|interleukin 17 receptor C##AK308241|IL17RC|84818|interleukin 17 receptor C##AF458065|IL17RC|84818|interleukin 17 receptor C##BC006411|IL17RC|84818|interleukin 17 receptor C##AK225650|IL17RC|84818|interleukin 17 receptor C##AY358840|IL17RC|84818|interleukin 17 receptor C##AK315053|IL17RC|84818|interleukin 17 receptor C##AK303171|IL17RC|84818|interleukin 17 receptor C##EF676032|IL17RC|84818|interleukin 17 receptor C##BC022807|TMEM111|55831|transmembrane protein 111##BC010883|TMEM111|55831|transmembrane protein 111##AK312008|TMEM111|55831|transmembrane protein 111##AK172843|TMEM111|55831|transmembrane protein 111##AF157321|TMEM111|55831|transmembrane protein 111##AK222953|TMEM111|55831|transmembrane protein 111##NM_018447|TMEM111|55831|transmembrane protein 111##AK092352|LOC442075|442075|uncharacterized LOC442075	0.541678	CTCF.p2:13:0.542
chr4	113872670	113872806	reg1020962.p1	6.955	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-133437	+	NM_015454 TSC_hg19_v1_chr4_+_113558677	-314070	+	TSC_hg19_v1_chr4_-_113558120 AK302613 AK299831 NM_018392	-314603	-	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	98096	+	TSC_hg19_v1_chr4_+_114214102 AK294720	341381	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	809543	-	AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7##AK302613|C4orf21|55345|chromosome 4 open reading frame 21##AK299831|C4orf21|55345|chromosome 4 open reading frame 21##NM_018392|C4orf21|55345|chromosome 4 open reading frame 21##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK294720|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.998989	CTCF.p2:-19:0.999
chr1	228827841	228827958	reg1020349.p1	6.954	+	AK055963 TSC_hg19_v1_chr1_+_228783500	-44468	+	TSC_hg19_v1_chr1_+_228675088 NM_001010858 BC012758	-152824	+	AK091220 NM_175055 BC100855 BC100856 BC100857 BC100858 BC137467 BC137468	-182092	+	TSC_hg19_v1_chr1_+_228870806 NM_021205 AF211836	42945	+	TSC_hg19_v1_chr1_+_228871199 AB209511 AK289971 BC040076 AF282258 AB074878 AB051826 AF378087	43400	+	AK313807 TSC_hg19_v1_chr1_+_229406857 BC004309 NM_004578 AY585832	578986	+	AK055963|DUSP5P|574029|dual specificity phosphatase 5 pseudogene##NM_001010858|RNF187|149603|ring finger protein 187##BC012758|RNF187|149603|ring finger protein 187##AK091220|HIST3H2BB|128312|histone cluster 3, H2bb##NM_175055|HIST3H2BB|128312|histone cluster 3, H2bb##BC100855|HIST3H2BB|128312|histone cluster 3, H2bb##BC100856|HIST3H2BB|128312|histone cluster 3, H2bb##BC100857|HIST3H2BB|128312|histone cluster 3, H2bb##BC100858|HIST3H2BB|128312|histone cluster 3, H2bb##BC137467|HIST3H2BB|128312|histone cluster 3, H2bb##BC137468|HIST3H2BB|128312|histone cluster 3, H2bb##NM_021205|RHOU|58480|ras homolog gene family, member U##AF211836|RHOU|58480|ras homolog gene family, member U##AB209511|RHOU|58480|ras homolog gene family, member U##AK289971|RHOU|58480|ras homolog gene family, member U##BC040076|RHOU|58480|ras homolog gene family, member U##AF282258|RHOU|58480|ras homolog gene family, member U##AB074878|RHOU|58480|ras homolog gene family, member U##AB051826|RHOU|58480|ras homolog gene family, member U##AF378087|RHOU|58480|ras homolog gene family, member U##AK313807|RAB4A|5867|RAB4A, member RAS oncogene family##BC004309|RAB4A|5867|RAB4A, member RAS oncogene family##NM_004578|RAB4A|5867|RAB4A, member RAS oncogene family##AY585832|RAB4A|5867|RAB4A, member RAS oncogene family	0.95154	CTCF.p2:-15:0.952
chr20	49126557	49126737	reg1018738.p1	6.954	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	-319017	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	-319266	+	NM_005194 TSC_hg19_v1_chr20_+_48807197	-319454	+	TSC_hg19_v1_chr20_+_49126895 AK290638 NM_002827	229	+	TSC_hg19_v1_chr20_+_49126916 AK316563	266	+	AK299830 TSC_hg19_v1_chr20_+_49126919	272	+	EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK290638|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##NM_002827|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK316563|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1	0.0	
chr9	15135261	15135408	reg1025089.p1	6.954	+	BX537574 NM_144966	-224342	-	AB160987 TSC_hg19_v1_chr9_-_14869016	-266335	-	BC031064 NM_001177704	-355804	-	AK301427 NM_001168342	114821	-	TSC_hg19_v1_chr9_-_15307215 BC070139 AK301185 AK298581 AK091187 AX746836	171866	-	TSC_hg19_v1_chr9_-_15307325 AK298998 BC142985 AK310482 NM_001168339 NM_001168340 NM_001168341 NM_152574	172010	-	BX537574|FREM1|158326|FRAS1 related extracellular matrix 1##NM_144966|FREM1|158326|FRAS1 related extracellular matrix 1##AB160987|FREM1|158326|FRAS1 related extracellular matrix 1##BC031064|FREM1|158326|FRAS1 related extracellular matrix 1##NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1##AK301427|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168342|TTC39B|158219|tetratricopeptide repeat domain 39B##BC070139|TTC39B|158219|tetratricopeptide repeat domain 39B##AK301185|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298581|TTC39B|158219|tetratricopeptide repeat domain 39B##AK091187|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298998|TTC39B|158219|tetratricopeptide repeat domain 39B##BC142985|TTC39B|158219|tetratricopeptide repeat domain 39B##AK310482|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168339|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168340|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168341|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_152574|TTC39B|158219|tetratricopeptide repeat domain 39B	0.726788	CTCF.p2:19:0.727
chr13	20193183	20193299	reg1020027.p1	6.953	+	BC128146 BC128147 AJ421032 AY219890 NM_001141968 NM_130785 NM_199254	-82348	-	BC011721 NM_006001	-437279	-	None	None	None	TSC_hg19_v1_chr13_+_20207808 AK300258 NM_017520 BC017322 AK092556 AX747597 AL832864 BC003542	14594	+	TSC_hg19_v1_chr13_-_20346399 AL834505	153199	-	CR457272 DQ892679 DQ895922 AB528394 AF448795 AF449627 TSC_hg19_v1_chr13_-_20357042	163674	-	BC128146|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##BC128147|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AJ421032|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AY219890|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_001141968|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_130785|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_199254|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##BC011721|TUBA3C|7278|tubulin, alpha 3c##NM_006001|TUBA3C|7278|tubulin, alpha 3c##AK300258|MPHOSPH8|54737|M-phase phosphoprotein 8##NM_017520|MPHOSPH8|54737|M-phase phosphoprotein 8##BC017322|MPHOSPH8|54737|M-phase phosphoprotein 8##AK092556|MPHOSPH8|54737|M-phase phosphoprotein 8##AL832864|MPHOSPH8|54737|M-phase phosphoprotein 8##BC003542|MPHOSPH8|54737|M-phase phosphoprotein 8##AL834505|PSPC1|55269|paraspeckle component 1##CR457272|PSPC1|55269|paraspeckle component 1##DQ892679|PSPC1|55269|paraspeckle component 1##DQ895922|PSPC1|55269|paraspeckle component 1##AF448795|PSPC1|55269|paraspeckle component 1##AF449627|PSPC1|55269|paraspeckle component 1	0.0	
chr14	24658091	24658254	reg1017890.p2	6.953	+	TSC_hg19_v1_chr14_-_24658018 AB208897 AK302097 AK094107 BC110804 AK095306 AK056527 AK057277 BC136759 BC144399 BC144400 NM_024658	-106	-	TSC_hg19_v1_chr14_-_24658004 AF411122 AK057044 AK056702 AK094897 AK314305 BX248267	-175	-	TSC_hg19_v1_chr14_+_24641288 AK001435 NM_001048205 NM_005132 BC010887 AL832973	-16899	+	TSC_hg19_v1_chr14_-_24664634 AK292110	6474	-	TSC_hg19_v1_chr14_-_24664891 BX161494 AK304642 BX161390 NM_001014842 NM_006405	6676	-	BC029918 AK131042 NM_001184739 NM_174944 BC111088 AY461663	16759	+	AB208897|IPO4|79711|importin 4##AK302097|IPO4|79711|importin 4##AK094107|IPO4|79711|importin 4##BC110804|IPO4|79711|importin 4##AK095306|IPO4|79711|importin 4##AK056527|IPO4|79711|importin 4##AK057277|IPO4|79711|importin 4##BC136759|IPO4|79711|importin 4##BC144399|IPO4|79711|importin 4##BC144400|IPO4|79711|importin 4##NM_024658|IPO4|79711|importin 4##AF411122|IPO4|79711|importin 4##AK057044|IPO4|79711|importin 4##AK056702|IPO4|79711|importin 4##AK094897|IPO4|79711|importin 4##AK314305|IPO4|79711|importin 4##BX248267|IPO4|79711|importin 4##AK001435|REC8|9985|REC8 homolog (yeast)##NM_001048205|REC8|9985|REC8 homolog (yeast)##NM_005132|REC8|9985|REC8 homolog (yeast)##BC010887|REC8|9985|REC8 homolog (yeast)##AL832973|REC8|9985|REC8 homolog (yeast)##AK292110|TM9SF1|10548|transmembrane 9 superfamily member 1##BX161494|TM9SF1|10548|transmembrane 9 superfamily member 1##AK304642|TM9SF1|10548|transmembrane 9 superfamily member 1##BX161390|TM9SF1|10548|transmembrane 9 superfamily member 1##NM_001014842|TM9SF1|10548|transmembrane 9 superfamily member 1##NM_006405|TM9SF1|10548|transmembrane 9 superfamily member 1##BC029918|TSSK4|283629|testis-specific serine kinase 4##AK131042|TSSK4|283629|testis-specific serine kinase 4##NM_001184739|TSSK4|283629|testis-specific serine kinase 4##NM_174944|TSSK4|283629|testis-specific serine kinase 4##BC111088|TSSK4|283629|testis-specific serine kinase 4##AY461663|TSSK4|283629|testis-specific serine kinase 4	0.0	
chr9	92218783	92218905	reg1002745.p3	6.953	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-105837	-	BC054500 NM_001142287 NM_006378	-124234	-	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-285426	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	1137	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	1186275	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1345192	+	BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase	0.992308	CTCF.p2:-15:0.992
chr11	2952056	2952177	reg1014312.p1	6.952	+	CR407664 AB464031 CU674965 AF019953 TSC_hg19_v1_chr11_-_2950651 BC005034 AF001294 AF035444 AK223027 NM_003311	-1491	-	NM_007105	-26942	-	TSC_hg19_v1_chr11_+_2924568 CU677351 EU176788	-27573	+	TSC_hg19_v1_chr11_-_3013513 BC022090 AK316242 AK316548	61384	-	TSC_hg19_v1_chr11_-_3013522 AK299515	61409	-	AK316324 TSC_hg19_v1_chr11_-_3013560	61439	-	CR407664|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AF019953|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##BC005034|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AF001294|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AF035444|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AK223027|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##NM_003311|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##NM_007105|SLC22A18AS|5003|solute carrier family 22 (organic cation transporter), member 18 antisense##EU176788|SLC22A18|5002|solute carrier family 22, member 18##BC022090|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316242|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316548|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4	1.063645	CTCF.p2:-1:0.938
chr11	78131530	78131644	reg1018565.p1	6.952	+	TSC_hg19_v1_chr11_-_78128866 NM_080491	-2711	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	-2781	-	AB011143 BC152459 NM_012296	-78662	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	154205	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	154308	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	1020137	-	NM_080491|GAB2|9846|GRB2-associated binding protein 2##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)	0.014331	
chr18	3297509	3297648	reg1019137.p2	6.952	+	NM_001144944 NM_001144945	-34915	+	TSC_hg19_v1_chr18_+_3262184 BC004994	-35381	+	NM_033546 AY320408 TSC_hg19_v1_chr18_+_3262134 AK291726 U26162 D50372 D82058	-35433	+	NM_174886	114493	+	NM_173207 AK291112	150039	+	NM_173209 NM_173208 TSC_hg19_v1_chr18_+_3450174 NM_003244 AK309471 X89750	152502	+	NM_001144944|MYL12B|103910|myosin, light chain 12B, regulatory##NM_001144945|MYL12B|103910|myosin, light chain 12B, regulatory##BC004994|MYL12B|103910|myosin, light chain 12B, regulatory##NM_033546|MYL12B|103910|myosin, light chain 12B, regulatory##AY320408|MYL12B|103910|myosin, light chain 12B, regulatory##AK291726|MYL12B|103910|myosin, light chain 12B, regulatory##U26162|MYL12B|103910|myosin, light chain 12B, regulatory##D50372|MYL12B|103910|myosin, light chain 12B, regulatory##D82058|MYL12B|103910|myosin, light chain 12B, regulatory##NM_174886|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173207|TGIF1|7050|TGFB-induced factor homeobox 1##AK291112|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1##NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1##AK309471|TGIF1|7050|TGFB-induced factor homeobox 1##X89750|TGIF1|7050|TGFB-induced factor homeobox 1	0.957795	CTCF.p2:5:0.958
chr18	68665844	68665971	reg1022531.p1	6.952	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-709646	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-709740	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-792969	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	1544868	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	1545823	-	AF448839 NM_138999	1867026	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.0	
chr2	106701931	106702047	reg1020995.p1	6.952	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	-19825	+	NM_001004720 BC000103	-233728	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	-269014	+	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	108756	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	108769	-	TSC_hg19_v1_chr2_-_106810781 NM_025076	108816	-	BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1	0.985577	CTCF.p2:4:0.986
chr5	33970080	33970167	reg1017411.p1	6.952	+	D88437 NM_016568	-33633	+	TSC_hg19_v1_chr5_-_33892294 AJ250725	-77828	-	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	-78078	-	CU687878 CU678524 AF172849 BC064405 BC003597 NM_001012509 NM_016180	14610	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	38040	-	TSC_hg19_v1_chr5_-_34008240 AK225749	38121	-	D88437|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##NM_016568|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AF172849|SLC45A2|51151|solute carrier family 45, member 2##BC064405|SLC45A2|51151|solute carrier family 45, member 2##BC003597|SLC45A2|51151|solute carrier family 45, member 2##NM_001012509|SLC45A2|51151|solute carrier family 45, member 2##NM_016180|SLC45A2|51151|solute carrier family 45, member 2##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase##AK225749|AMACR|23600|alpha-methylacyl-CoA racemase	0.103491	
chrX	13272665	13272782	reg1019069.p1	6.952	+	BX647580 AK313776 AF494345 BX648111 BX648919 NM_174901	-209905	-	TSC_hg19_v1_chrX_+_12994293 BC104464 BC104465 BT007090 X02493	-278380	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	-279483	+	AB050195 TSC_hg19_v1_chrX_-_13338140 BC137186 BC137187	65415	-	AK302365 NM_001135995	65794	-	TSC_hg19_v1_chrX_-_13397507 D28370	124782	-	BX647580|FAM9C|171484|family with sequence similarity 9, member C##AK313776|FAM9C|171484|family with sequence similarity 9, member C##AF494345|FAM9C|171484|family with sequence similarity 9, member C##BX648111|FAM9C|171484|family with sequence similarity 9, member C##BX648919|FAM9C|171484|family with sequence similarity 9, member C##NM_174901|FAM9C|171484|family with sequence similarity 9, member C##BC104464|TMSB4X|7114|thymosin beta 4, X-linked##BC104465|TMSB4X|7114|thymosin beta 4, X-linked##BT007090|TMSB4X|7114|thymosin beta 4, X-linked##X02493|TMSB4X|7114|thymosin beta 4, X-linked##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked##AB050195|ATXN3L|92552|ataxin 3-like##BC137186|ATXN3L|92552|ataxin 3-like##BC137187|ATXN3L|92552|ataxin 3-like##AK302365|ATXN3L|92552|ataxin 3-like##NM_001135995|ATXN3L|92552|ataxin 3-like	0.142596	
chr10	15767862	15767962	reg1020896.p2	6.951	+	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	-6119	-	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	-354763	-	BT007024 CU675371 DQ890667 DQ893848 BC006376 AK315085 AK094904 AF043325 TSC_hg19_v1_chr10_-_15210693 NM_004808	-557251	-	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	134579	-	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	711073	+	NM_001010908	796091	-	L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##BT007024|NMT2|9397|N-myristoyltransferase 2##DQ890667|NMT2|9397|N-myristoyltransferase 2##DQ893848|NMT2|9397|N-myristoyltransferase 2##BC006376|NMT2|9397|N-myristoyltransferase 2##AK315085|NMT2|9397|N-myristoyltransferase 2##AK094904|NMT2|9397|N-myristoyltransferase 2##AF043325|NMT2|9397|N-myristoyltransferase 2##NM_004808|NMT2|9397|N-myristoyltransferase 2##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related##NM_001010908|C1QL3|389941|complement component 1, q subcomponent-like 3	0.986938	CTCF.p2:4:0.987
chr3	182555767	182555887	reg1020959.p1	6.951	+	TSC_hg19_v1_chr3_+_182511414 AB527450	-44348	+	TSC_hg19_v1_chr3_+_182511375 AF156548	-44438	+	AK296750 TSC_hg19_v1_chr3_+_182511291	-44532	+	AF456425 AF456426 TSC_hg19_v1_chr3_-_182698327 AF292100 AK314480 BC009478 AK056335 AK297328 NM_020640	142502	-	AB587379 CU678606 TSC_hg19_v1_chr3_-_182817309 CR749608 AK316428 AB209737 AL442091 AK294882	261454	-	AK295293 TSC_hg19_v1_chr3_-_182817343 AK023051 AB029826 AF310339 BC004187 BC004214 AF310972 NM_020166	261523	-	AF156548|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF456425|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##AF456426|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##AF292100|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##AK314480|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##BC009478|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##AK056335|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##AK297328|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##NM_020640|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##CR749608|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK316428|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AB209737|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AL442091|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK294882|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK295293|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK023051|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AB029826|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AF310339|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##BC004187|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##BC004214|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AF310972|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##NM_020166|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)	0.305919	CTCF.p2:2:0.306
chr9	38642113	38642234	reg1020335.p1	6.951	+	TSC_hg19_v1_chr9_-_38620602 BC056266	-21550	-	AB385522 AB095935 BC152434 NM_147195	-21852	-	TSC_hg19_v1_chr9_-_38424452 AB463783 NM_001007563	-217708	-	AB385498 AK294281 AB051501 BC132737 BC144130 AK056833 NM_033655	646007	-	AK302569 NM_001040065 NM_001085452 BC146855	713512	+	AK302569 NM_001040065 NM_001085452 BC146855	1242788	+	BC056266|ANKRD18A|253650|ankyrin repeat domain 18A##AB095935|ANKRD18A|253650|ankyrin repeat domain 18A##BC152434|ANKRD18A|253650|ankyrin repeat domain 18A##NM_147195|ANKRD18A|253650|ankyrin repeat domain 18A##NM_001007563|IGFBPL1|347252|insulin-like growth factor binding protein-like 1##AK294281|CNTNAP3|79937|contactin associated protein-like 3##AB051501|CNTNAP3|79937|contactin associated protein-like 3##BC132737|CNTNAP3|79937|contactin associated protein-like 3##BC144130|CNTNAP3|79937|contactin associated protein-like 3##AK056833|CNTNAP3|79937|contactin associated protein-like 3##NM_033655|CNTNAP3|79937|contactin associated protein-like 3##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2	0.036461	
chr5	17190705	17190837	reg1014823.p3	6.950	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-254386	-	BC050682 BC041694 TSC_hg19_v1_chr5_-_16936357 BC108736 BC032669	-254443	-	AK316138 TSC_hg19_v1_chr5_-_16742338	-448434	-	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	26841	+	TSC_hg19_v1_chr5_+_17217804 AF039656	27069	+	AK295087 BC031051 NM_001167667 NM_004934	2797551	-	AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##BC050682|MYO10|4651|myosin X##BC041694|MYO10|4651|myosin X##BC108736|MYO10|4651|myosin X##BC032669|MYO10|4651|myosin X##AK316138|MYO10|4651|myosin X##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2	0.974761	CTCF.p2:11:0.975
chr10	74008704	74008828	reg1017153.p2	6.949	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-32655	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-32978	+	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	-33002	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	25058	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	105912	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	106160	-	AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	0.0	
chr11	37470874	37470982	reg1014833.p1	6.949	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-851126	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-854824	+	NM_000448 M29474	-881360	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	2843666	-	AB046800 NM_020929	2844735	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	5862590	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.019217	
chr16	71599495	71599624	reg1019725.p3	6.949	+	NM_005769 AF131235 NM_001166395 AK026635 AK074746	-39466	+	AK292260 BC030658 AK057330 BC047091 NM_006961	-76344	-	AK123826 TSC_hg19_v1_chr16_+_71496196	-103371	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	11413	-	BC005052 NM_001017967 NM_052858 AK307585 BC011893 BC013376 AK056842 AK292185 CU680584	60538	+	AB463166 AM393067 AM393542 BC129927 BC129983 NM_015020	149141	-	NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19##X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase##BC005052|MARVELD3|91862|MARVEL domain containing 3##NM_001017967|MARVELD3|91862|MARVEL domain containing 3##NM_052858|MARVELD3|91862|MARVEL domain containing 3##AK307585|MARVELD3|91862|MARVEL domain containing 3##BC011893|MARVELD3|91862|MARVEL domain containing 3##BC013376|MARVELD3|91862|MARVEL domain containing 3##AK056842|MARVELD3|91862|MARVEL domain containing 3##AK292185|MARVELD3|91862|MARVEL domain containing 3##AM393067|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AM393542|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129927|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129983|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##NM_015020|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2	0.177637	
chr3	142563340	142563480	reg1020832.p2	6.948	+	TSC_hg19_v1_chr3_+_142443214 NM_001251845 NM_003304 X89066 BC112338 BC113953 AB255425	-120103	+	TSC_hg19_v1_chr3_+_142442891 Z73903	-120478	+	BC031083 NM_001172312	-187672	+	CR536570 TSC_hg19_v1_chr3_-_142607926 AB528798 AF098269 BC006265 AK315121 AY035400 AK223633 AY358557 AK075478 NM_013363	44486	-	AK123932 BC118666 BC122527 NM_198504 AY424287	118805	-	TSC_hg19_v1_chr3_+_142682794 BC062727	119420	+	NM_001251845|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##NM_003304|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##X89066|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##BC112338|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##BC113953|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##AB255425|TRPC1|7220|transient receptor potential cation channel, subfamily C, member 1##BC031083|PLS1|5357|plastin 1##NM_001172312|PLS1|5357|plastin 1##CR536570|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AF098269|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##BC006265|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK315121|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AY035400|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK223633|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AY358557|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK075478|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##NM_013363|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK123932|PAQR9|344838|progestin and adipoQ receptor family member IX##BC118666|PAQR9|344838|progestin and adipoQ receptor family member IX##BC122527|PAQR9|344838|progestin and adipoQ receptor family member IX##NM_198504|PAQR9|344838|progestin and adipoQ receptor family member IX##AY424287|PAQR9|344838|progestin and adipoQ receptor family member IX##BC062727|U2SURP|23350|U2 snRNP-associated SURP domain containing	0.180941	
chr4	43474096	43474199	reg1020262.p2	6.948	+	AB528853 NM_001080476	-578866	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	-815059	-	NM_001080505	-1074292	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	976406	-	AK123347 NM_198353	976676	-	AK096895 BC103995 BC103996 NM_182592	1179510	-	NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7	0.339621	CTCF.p2:4:0.340
chrY	14550671	14550757	reg1016593.p1	6.948	+	BC121113 BC121114 NM_001077697 U58096 BC075016 AY130858 M98525	-5185178	+	BC121113 NM_001197242 NM_003308 U58096 AK093413 AX748111 AY130858 M98525	-5246103	+	BC121113 BC121114 NM_001077697 U58096 BC075016 AK093413 AX748111 AY130858 NM_001164471 M94893 M98525	-5314637	+	TSC_hg19_v1_chrY_+_14774204 AL080135	223535	+	AF000986 NM_004654	262445	+	BC034942 NM_001122665	465304	+	BC121113|TSPY1|7258|testis specific protein, Y-linked 1##BC121114|TSPY3|728137|testis specific protein, Y-linked 3##NM_001077697|TSPY3|728137|testis specific protein, Y-linked 3##U58096|TSPY1|7258|testis specific protein, Y-linked 1##BC075016|TSPY3|728137|testis specific protein, Y-linked 3##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##M98525|TSPY1|7258|testis specific protein, Y-linked 1##BC121113|TSPY1|7258|testis specific protein, Y-linked 1##NM_001197242|TSPY1|7258|testis specific protein, Y-linked 1##NM_003308|TSPY1|7258|testis specific protein, Y-linked 1##U58096|TSPY1|7258|testis specific protein, Y-linked 1##AK093413|TSPY4|728395|testis specific protein, Y-linked 4##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##M98525|TSPY1|7258|testis specific protein, Y-linked 1##BC121113|TSPY1|7258|testis specific protein, Y-linked 1##BC121114|TSPY3|728137|testis specific protein, Y-linked 3##NM_001077697|TSPY3|728137|testis specific protein, Y-linked 3##U58096|TSPY1|7258|testis specific protein, Y-linked 1##BC075016|TSPY3|728137|testis specific protein, Y-linked 3##AK093413|TSPY4|728395|testis specific protein, Y-linked 4##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##NM_001164471|TSPY4|728395|testis specific protein, Y-linked 4##M94893|TSPY1|7258|testis specific protein, Y-linked 1##M98525|TSPY1|7258|testis specific protein, Y-linked 1##AL080135|TTTY15|64595|testis-specific transcript, Y-linked 15 (non-protein coding)##AF000986|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked##NM_004654|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked##BC034942|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked##NM_001122665|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	0.023943	
chr19	2171385	2171476	reg1006898.p1	6.947	+	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	-7292	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-19877	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	-19888	-	BC021037 TSC_hg19_v1_chr19_+_2222534	51044	+	BC032803 TSC_hg19_v1_chr19_+_2232168	60691	+	CR457253 CU679203 TSC_hg19_v1_chr19_-_2236329 AK092742 AX747701 BC003084 BC008966 AK001159 NM_018049	64859	-	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##CR457253|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK092742|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC003084|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC008966|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK001159|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##NM_018049|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1	0.0	
chr9	139682233	139682323	reg1018017.p1	6.947	+	BC093893 BC093895 AY358618 NM_203347	-23317	-	BC130465 BC132714 AK126902 NM_178469 BC042109	-29566	-	BC026910 AY301269 HQ257933 AY358598 AF303084 BC062746 NM_198946	-39337	-	TSC_hg19_v1_chr9_+_139685795 NM_032928 BC007834	3509	+	TSC_hg19_v1_chr9_+_139685818 CU675821	3556	+	NM_001039374 BC064582 BC137317 BC137318	8523	+	BC093893|LCN15|389812|lipocalin 15##BC093895|LCN15|389812|lipocalin 15##AY358618|LCN15|389812|lipocalin 15##NM_203347|LCN15|389812|lipocalin 15##BC130465|LCN8|138307|lipocalin 8##BC132714|LCN8|138307|lipocalin 8##AK126902|LCN8|138307|lipocalin 8##NM_178469|LCN8|138307|lipocalin 8##BC042109|LCN8|138307|lipocalin 8##AY301269|LCN6|158062|lipocalin 6##HQ257933|LCN6|158062|lipocalin 6##AY358598|LCN6|158062|lipocalin 6##AF303084|LCN6|158062|lipocalin 6##BC062746|LCN6|158062|lipocalin 6##NM_198946|LCN6|158062|lipocalin 6##NM_032928|TMEM141|85014|transmembrane protein 141##BC007834|TMEM141|85014|transmembrane protein 141##NM_001039374|KIAA1984|84960|KIAA1984##BC064582|KIAA1984|84960|KIAA1984##BC137317|KIAA1984|84960|KIAA1984##BC137318|KIAA1984|84960|KIAA1984	0.990866	CTCF.p2:-13:0.991
chr10	95440301	95440431	reg1022671.p1	6.946	+	NM_006204 U31973 BC111377	-67959	+	X00129 TSC_hg19_v1_chr10_-_95360993 BC020633 NM_006744	-79388	-	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	-113857	+	TSC_hg19_v1_chr10_-_95462320 AJ431721 AJ431722 AJ431723 AJ431724 AJ431725 AK090955 AX746703 NM_145246	21969	-	NM_005097 BC022500 AF055636 AF473548 AK309416 AY358885 AK303956	77280	+	TSC_hg19_v1_chr10_+_95653753 AK091309 AX746907 NM_001134658 NM_153226 BC036382 BC058549 BC143283 BC143284 BC104814 BC047102	213374	+	NM_006204|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##U31973|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##BC111377|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##X00129|RBP4|5950|retinol binding protein 4, plasma##BC020633|RBP4|5950|retinol binding protein 4, plasma##NM_006744|RBP4|5950|retinol binding protein 4, plasma##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1##AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1##BC022500|LGI1|9211|leucine-rich, glioma inactivated 1##AF055636|LGI1|9211|leucine-rich, glioma inactivated 1##AF473548|LGI1|9211|leucine-rich, glioma inactivated 1##AK309416|LGI1|9211|leucine-rich, glioma inactivated 1##AY358885|LGI1|9211|leucine-rich, glioma inactivated 1##AK303956|LGI1|9211|leucine-rich, glioma inactivated 1##AK091309|SLC35G1|159371|solute carrier family 35, member G1##NM_001134658|SLC35G1|159371|solute carrier family 35, member G1##NM_153226|SLC35G1|159371|solute carrier family 35, member G1##BC036382|SLC35G1|159371|solute carrier family 35, member G1##BC143284|SLC35G1|159371|solute carrier family 35, member G1##BC104814|SLC35G1|159371|solute carrier family 35, member G1##BC047102|SLC35G1|159371|solute carrier family 35, member G1	0.254022	CTCF.p2:3:0.254
chr1	165227298	165227426	reg1023072.p1	6.946	+	TSC_hg19_v1_chr1_+_164818083 AK022520	-409239	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	-698376	+	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	-698771	+	AK122800 NM_001174069	98113	-	AK127724 NM_177398	98589	-	AB593016 AK312922 NM_006917	187183	-	AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AB593016|RXRG|6258|retinoid X receptor, gamma##AK312922|RXRG|6258|retinoid X receptor, gamma##NM_006917|RXRG|6258|retinoid X receptor, gamma	0.999707	CTCF.p2:-7:1.000
chr1	224095832	224095975	reg1022724.p1	6.946	+	NM_001031685 NM_005426 TSC_hg19_v1_chr1_-_224033682	-62209	-	TSC_hg19_v1_chr1_-_224033620 BC046150 AJ318888 U58334 BC058918	-62280	-	AB384887 TSC_hg19_v1_chr1_-_224033497 AK294432	-62440	-	NM_001136115 NM_015176 TSC_hg19_v1_chr1_+_224301812 AK001628 AK307892 BC031576 AK303381 CU689186	205907	+	TSC_hg19_v1_chr1_+_224370925 BC000961 NM_003676	275019	+	TSC_hg19_v1_chr1_+_224370941 AK308232 AF466375 AY423730 AF002668 CU674476	275084	+	NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2##BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2##AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2##U58334|TP53BP2|7159|tumor protein p53 binding protein, 2##BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2##AK294432|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_001136115|FBXO28|23219|F-box protein 28##NM_015176|FBXO28|23219|F-box protein 28##AK001628|FBXO28|23219|F-box protein 28##AK307892|FBXO28|23219|F-box protein 28##BC031576|FBXO28|23219|F-box protein 28##AK303381|FBXO28|23219|F-box protein 28##BC000961|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_003676|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AK308232|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF466375|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AY423730|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF002668|DEGS1|8560|delta(4)-desaturase, sphingolipid 1	0.168637	
chr13	50253538	50253666	reg1022820.p1	6.946	+	AF441378 NM_138450	-51168	+	TSC_hg19_v1_chr13_-_50159706 BC038104 AK096654 NM_018191	-93878	-	AL833821 TSC_hg19_v1_chr13_-_50159688 AJ319660 AF334406	-93937	-	TSC_hg19_v1_chr13_-_50265590 DQ891521 DQ894711 BC018478	11919	-	TSC_hg19_v1_chr13_-_50265611 BC021021 AF243433 BC092471 BC073152 NM_032565	12027	-	TSC_hg19_v1_chr13_-_50366675 AF034756 DQ892644 DQ895882 AB528414 AF005263 Y12394 BC017355 BC024202 AK291000 AK223480	113015	-	AF441378|ARL11|115761|ADP-ribosylation factor-like 11##NM_138450|ARL11|115761|ADP-ribosylation factor-like 11##BC038104|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AK096654|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##NM_018191|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AL833821|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AJ319660|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AF334406|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##DQ891521|EBPL|84650|emopamil binding protein-like##DQ894711|EBPL|84650|emopamil binding protein-like##BC018478|EBPL|84650|emopamil binding protein-like##BC021021|EBPL|84650|emopamil binding protein-like##AF243433|EBPL|84650|emopamil binding protein-like##BC092471|EBPL|84650|emopamil binding protein-like##BC073152|EBPL|84650|emopamil binding protein-like##NM_032565|EBPL|84650|emopamil binding protein-like##AF034756|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##DQ892644|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##DQ895882|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AF005263|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##Y12394|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC017355|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC024202|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK291000|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK223480|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)	0.315351	CTCF.p2:-6:0.315
chr2	152447940	152448069	reg1020579.p1	6.946	+	AY727912 NM_001177665 TSC_hg19_v1_chr2_+_152266674	-181366	+	TSC_hg19_v1_chr2_+_152266419 AY727910 AY727913 NM_001177663 NM_018151 AY727911 NM_001177664 AK299572 AK299291 BX648324 AY585745 CR933663	-181574	+	NM_007115 M31165 BC030205 AB590644 AJ419936 AJ421518 CU688838 AF086484	-233825	+	TSC_hg19_v1_chr2_-_152590990 AK096903 AK307607 BC029384 BC012533 BC056251 BC105590 NM_001164507 NM_001164508 NM_004543	142987	-	AB528315 AF493891 BT009829 DQ891193 DQ894376 TSC_hg19_v1_chr2_-_152684707 AF100740	236717	-	TSC_hg19_v1_chr2_-_152684901 AK292714 BC001254	236899	-	AY727912|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177665|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727910|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727913|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_018151|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727911|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177664|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299572|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299291|RIF1|55183|RAP1 interacting factor homolog (yeast)##BX648324|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY585745|RIF1|55183|RAP1 interacting factor homolog (yeast)##CR933663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_007115|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##M31165|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##BC030205|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AJ419936|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AJ421518|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AF086484|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AK096903|NEB|4703|nebulin##AK307607|NEB|4703|nebulin##BC029384|NEB|4703|nebulin##BC012533|NEB|4703|nebulin##BC056251|NEB|4703|nebulin##BC105590|NEB|4703|nebulin##NM_001164507|NEB|4703|nebulin##NM_001164508|NEB|4703|nebulin##NM_004543|NEB|4703|nebulin##AF493891|ARL5A|26225|ADP-ribosylation factor-like 5A##BT009829|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ891193|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ894376|ARL5A|26225|ADP-ribosylation factor-like 5A##AF100740|ARL5A|26225|ADP-ribosylation factor-like 5A##AK292714|ARL5A|26225|ADP-ribosylation factor-like 5A##BC001254|ARL5A|26225|ADP-ribosylation factor-like 5A	0.145861	
chr1	148577668	148577790	reg1020454.p1	6.945	+	NM_001102663 AK290302 AY894566	-313	+	NM_173638 BC023087	-16812	+	NM_001170755 AK097180	-19502	+	NM_001144032	66281	+	NM_001102663 AK290302 AY894562 AY894566	161772	+	NM_001164261 NM_001164262	228285	+	NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_173638|NBPF15|284565|neuroblastoma breakpoint family, member 15##BC023087|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15##AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001144032|PPIAL4E|730262|peptidylprolyl isomerase A (cyclophilin A)-like 4E##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F	0.389166	CTCF.p2:0:0.389
chr12	76849659	76849767	reg1019014.p1	6.945	+	TSC_hg19_v1_chr12_-_76742196 AK304178 BC026355 NM_024685	-107519	-	NM_004537 NM_139207	-370976	-	TSC_hg19_v1_chr12_-_76478466 BC002387 AL162068 AK122670 AK298936 D28430 AK297500 AK304787	-371225	-	AB040884 TSC_hg19_v1_chr12_-_76953317 AK289997 CR749542	103578	-	BC111728 TSC_hg19_v1_chr12_-_76953484	103770	-	TSC_hg19_v1_chr12_-_76953526 BC082235	103818	-	AK304178|BBS10|79738|Bardet-Biedl syndrome 10##BC026355|BBS10|79738|Bardet-Biedl syndrome 10##NM_024685|BBS10|79738|Bardet-Biedl syndrome 10##NM_004537|NAP1L1|4673|nucleosome assembly protein 1-like 1##NM_139207|NAP1L1|4673|nucleosome assembly protein 1-like 1##BC002387|NAP1L1|4673|nucleosome assembly protein 1-like 1##AL162068|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK122670|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK298936|NAP1L1|4673|nucleosome assembly protein 1-like 1##D28430|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK297500|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK304787|NAP1L1|4673|nucleosome assembly protein 1-like 1##AB040884|OSBPL8|114882|oxysterol binding protein-like 8##AK289997|OSBPL8|114882|oxysterol binding protein-like 8##CR749542|OSBPL8|114882|oxysterol binding protein-like 8##BC111728|OSBPL8|114882|oxysterol binding protein-like 8##BC082235|OSBPL8|114882|oxysterol binding protein-like 8	0.963641	CTCF.p2:7:0.964
chr4	27320516	27320616	reg1019655.p1	6.945	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-458026	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-734886	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-828581	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3401433	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3401628	+	TSC_hg19_v1_chr4_+_30722465 AB006756	3401893	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.029015	
chr10	118547651	118547801	reg1018425.p1	6.944	+	AB385329 TSC_hg19_v1_chr10_-_118502078 AB007877 NM_025015	-45648	-	AK097587 BC021737 NM_144661	-118252	-	TSC_hg19_v1_chr10_+_118380464 AK291492 AK307745 AK308508 AK308511 AK308521 NM_005396	-167267	+	BX647301 NM_001242699	61296	+	BC022348 TSC_hg19_v1_chr10_-_118680989 AL157479	133266	-	AB046818 AB384620 CU689320 EF055487 TSC_hg19_v1_chr10_-_118764698 BC032303 CR749417 BX537593 BX648065	216906	-	AB007877|HSPA12A|259217|heat shock 70kDa protein 12A##NM_025015|HSPA12A|259217|heat shock 70kDa protein 12A##AK097587|C10orf82|143379|chromosome 10 open reading frame 82##BC021737|C10orf82|143379|chromosome 10 open reading frame 82##NM_144661|C10orf82|143379|chromosome 10 open reading frame 82##AK291492|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK307745|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308508|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308511|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308521|PNLIPRP2|5408|pancreatic lipase-related protein 2##NM_005396|PNLIPRP2|5408|pancreatic lipase-related protein 2##BX647301|ENO4|387712|enolase family member 4##NM_001242699|ENO4|387712|enolase family member 4##BC022348|KIAA1598|57698|KIAA1598##AL157479|KIAA1598|57698|KIAA1598##AB046818|KIAA1598|57698|KIAA1598##EF055487|KIAA1598|57698|KIAA1598##BC032303|KIAA1598|57698|KIAA1598##CR749417|KIAA1598|57698|KIAA1598##BX537593|KIAA1598|57698|KIAA1598##BX648065|KIAA1598|57698|KIAA1598	0.999424	CTCF.p2:30:0.999
chr11	55474626	55474768	reg1021243.p2	6.944	+	BC137216 BC137218 AB463962 NM_001004704	-42070	+	AB463967 NM_001004059	-56319	+	NM_001004124	-68864	+	NM_001001967	66216	+	AB463969 NM_001004735	88334	+	BC136939 BC109249 BC109250 NM_001004738	104195	+	BC137216|OR4C6|219432|olfactory receptor, family 4, subfamily C, member 6##BC137218|OR4C6|219432|olfactory receptor, family 4, subfamily C, member 6##NM_001004704|OR4C6|219432|olfactory receptor, family 4, subfamily C, member 6##NM_001004059|OR4S2|219431|olfactory receptor, family 4, subfamily S, member 2##NM_001004124|OR4P4|81300|olfactory receptor, family 4, subfamily P, member 4##NM_001001967|OR5D13|390142|olfactory receptor, family 5, subfamily D, member 13##NM_001004735|OR5D14|219436|olfactory receptor, family 5, subfamily D, member 14##BC136939|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1##BC109249|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1##BC109250|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1##NM_001004738|OR5L1|219437|olfactory receptor, family 5, subfamily L, member 1	0.99118	CTCF.p2:4:0.991
chr2	182768902	182769012	reg1020482.p2	6.944	+	TSC_hg19_v1_chr2_+_182756689 BC052581 BC064499 BC028706 AK291745 BX647257 AB116937 AB385517 BX647967 AK304238 BX648888	-12164	+	TSC_hg19_v1_chr2_+_182756494 NM_001130445 NM_006751 AK093143 AX747951 AB067514	-12426	+	BC009046 TSC_hg19_v1_chr2_-_182545243 AB593068 AB593070 AB593071 AK313799 AB593069 D82347 HQ426678 JF290420 NM_002500	-223656	-	NM_001080545 AK129898 AF494535 BX647581 BC017943	81692	+	AK295657 AB384753 DQ892369 DQ893372 DQ895578 DQ896694 AF110237 NM_005019 BC022480 AF110240 AF110236 NM_001003683 U40370 AK294239	618327	-	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	812117	+	BC052581|SSFA2|6744|sperm specific antigen 2##BC064499|SSFA2|6744|sperm specific antigen 2##BC028706|SSFA2|6744|sperm specific antigen 2##AK291745|SSFA2|6744|sperm specific antigen 2##BX647257|SSFA2|6744|sperm specific antigen 2##AB116937|SSFA2|6744|sperm specific antigen 2##BX647967|SSFA2|6744|sperm specific antigen 2##AK304238|SSFA2|6744|sperm specific antigen 2##BX648888|SSFA2|6744|sperm specific antigen 2##NM_001130445|SSFA2|6744|sperm specific antigen 2##NM_006751|SSFA2|6744|sperm specific antigen 2##AB067514|SSFA2|6744|sperm specific antigen 2##BC009046|NEUROD1|4760|neurogenic differentiation 1##AB593068|NEUROD1|4760|neurogenic differentiation 1##AB593070|NEUROD1|4760|neurogenic differentiation 1##AB593071|NEUROD1|4760|neurogenic differentiation 1##AK313799|NEUROD1|4760|neurogenic differentiation 1##AB593069|NEUROD1|4760|neurogenic differentiation 1##D82347|NEUROD1|4760|neurogenic differentiation 1##HQ426678|CERKL|375298|ceramide kinase-like##JF290420|CERKL|375298|ceramide kinase-like##NM_002500|NEUROD1|4760|neurogenic differentiation 1##NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	0.887566	CTCF.p2:1:0.888
chr3	14550526	14550624	reg1019441.p1	6.944	+	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	-106459	+	TSC_hg19_v1_chr3_+_14444072 AK303649	-106506	+	TSC_hg19_v1_chr3_+_14220355 AJ238095 AB463841 CR457185	-330224	+	NM_001080423	33012	-	TSC_hg19_v1_chr3_+_14693268 NM_016474 AK091158 AX746816 BC005199 BC033897 BC013999	142683	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	142708	+	NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AJ238095|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##CR457185|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2##NM_016474|C3orf19|51244|chromosome 3 open reading frame 19##AK091158|C3orf19|51244|chromosome 3 open reading frame 19##BC005199|C3orf19|51244|chromosome 3 open reading frame 19##BC033897|C3orf19|51244|chromosome 3 open reading frame 19##BC013999|C3orf19|51244|chromosome 3 open reading frame 19##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19	1.18482	CTCF.p2:12:1.000
chr4	81283885	81283993	reg1019771.p1	6.944	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-27042	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	-96080	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	-165285	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	668203	+	AB528214 D70899 NM_006259 X94612	842268	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	1109044	-	BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B	0.565626	CTCF.p2:-7:0.566
chr6	126497535	126497679	reg1023227.p1	6.944	+	TSC_hg19_v1_chr6_+_126307685 AK308651	-189944	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	-190005	+	TSC_hg19_v1_chr6_+_126277915 NM_138571 BX647228 AK309857 BC015732 AK057688 AJ420577 AY035387 AY035388 AY486460 AY486461 DQ892201 DQ895396	-219622	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	163663	+	TSC_hg19_v1_chr6_+_127439818 BC022367	942204	+	NM_032784 AF251057	942444	+	AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_138571|HINT3|135114|histidine triad nucleotide binding protein 3##BX647228|HINT3|135114|histidine triad nucleotide binding protein 3##AK309857|HINT3|135114|histidine triad nucleotide binding protein 3##BC015732|HINT3|135114|histidine triad nucleotide binding protein 3##AK057688|HINT3|135114|histidine triad nucleotide binding protein 3##AJ420577|HINT3|135114|histidine triad nucleotide binding protein 3##AY035387|HINT3|135114|histidine triad nucleotide binding protein 3##AY035388|HINT3|135114|histidine triad nucleotide binding protein 3##AY486460|HINT3|135114|histidine triad nucleotide binding protein 3##AY486461|HINT3|135114|histidine triad nucleotide binding protein 3##DQ892201|HINT3|135114|histidine triad nucleotide binding protein 3##DQ895396|HINT3|135114|histidine triad nucleotide binding protein 3##BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##BC022367|RSPO3|84870|R-spondin 3##NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3	0.738891	CTCF.p2:-2:0.739
chr12	66663694	66663819	reg1019831.p1	6.943	+	BC069388 AK298645 TSC_hg19_v1_chr12_+_66583064 AB590803 CU691242	-80703	+	TSC_hg19_v1_chr12_+_66583004 AF113136	-80746	+	TSC_hg19_v1_chr12_+_66582993 BC029493 NM_001142523 NM_007199 BC047399 AK314040 BC057800	-80798	+	TSC_hg19_v1_chr12_+_66696305 NM_033647 BC143409 BC143411 AK290894 AK024464 AB527324 AF319995	32573	+	BC115393 BC115394 TSC_hg19_v1_chr12_-_67072757 AK307576	409000	-	TSC_hg19_v1_chr12_-_67072881 AK095519 NM_001178074 NM_021150	409146	-	BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3##NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3##NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3##NM_033647|HELB|92797|helicase (DNA) B##BC143409|HELB|92797|helicase (DNA) B##BC143411|HELB|92797|helicase (DNA) B##AK290894|HELB|92797|helicase (DNA) B##AF319995|HELB|92797|helicase (DNA) B##BC115393|GRIP1|23426|glutamate receptor interacting protein 1##BC115394|GRIP1|23426|glutamate receptor interacting protein 1##AK307576|GRIP1|23426|glutamate receptor interacting protein 1##AK095519|GRIP1|23426|glutamate receptor interacting protein 1##NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1##NM_021150|GRIP1|23426|glutamate receptor interacting protein 1	0.351237	CTCF.p2:6:0.351
chr13	79450478	79450618	reg1019584.p2	6.942	+	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	-217255	-	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	-272825	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	-280266	+	BX648672 BC111697 BC111739 BC041655 NM_022118 TSC_hg19_v1_chr13_-_79979967 AK302871	529406	-	BC030806 TSC_hg19_v1_chr13_-_79980382	529835	-	TSC_hg19_v1_chr13_+_79980440 AK002196 BC034812	529903	+	AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##BX648672|RBM26|64062|RNA binding motif protein 26##BC111697|RBM26|64062|RNA binding motif protein 26##BC111739|RBM26|64062|RNA binding motif protein 26##BC041655|RBM26|64062|RNA binding motif protein 26##NM_022118|RBM26|64062|RNA binding motif protein 26##AK302871|RBM26|64062|RNA binding motif protein 26##BC030806|RBM26|64062|RNA binding motif protein 26##AK002196|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)##BC034812|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)	0.995506	CTCF.p2:3:0.996
chr22	44279086	44279225	reg1020672.p1	6.942	+	AK295399 AF115311 AL590119 AB587375 CR456588 CU013188 CU013476 DQ892373 DQ895583 CU688978 CU692628 BC022459 TSC_hg19_v1_chr22_-_44258315 AF176342 AF251263 AK313048 AK294622 AF188698 BC028171 NM_014351 BC030665	-20852	-	BC039315 TSC_hg19_v1_chr22_-_44208121 AK296679 AK292498 AK292411 AK058069 NM_022785 NM_198856	-71014	-	TSC_hg19_v1_chr22_+_43808109 AK289774	-471038	+	BC104839 BC104843 BC143696 BC031820 AK056648 AK127172 NM_001177675 NM_138814	8694	-	AK025665 AL138578 NM_025225 TSC_hg19_v1_chr22_+_44319651 AK308995	40489	+	TSC_hg19_v1_chr22_+_44319684 AK123806 AK315166	40524	+	AK295399|SULT4A1|25830|sulfotransferase family 4A, member 1##AF115311|SULT4A1|25830|sulfotransferase family 4A, member 1##AL590119|SULT4A1|25830|sulfotransferase family 4A, member 1##CR456588|SULT4A1|25830|sulfotransferase family 4A, member 1##CU013188|SULT4A1|25830|sulfotransferase family 4A, member 1##CU013476|SULT4A1|25830|sulfotransferase family 4A, member 1##DQ892373|SULT4A1|25830|sulfotransferase family 4A, member 1##DQ895583|SULT4A1|25830|sulfotransferase family 4A, member 1##BC022459|SULT4A1|25830|sulfotransferase family 4A, member 1##AF176342|SULT4A1|25830|sulfotransferase family 4A, member 1##AF251263|SULT4A1|25830|sulfotransferase family 4A, member 1##AK313048|SULT4A1|25830|sulfotransferase family 4A, member 1##AK294622|SULT4A1|25830|sulfotransferase family 4A, member 1##AF188698|SULT4A1|25830|sulfotransferase family 4A, member 1##BC028171|SULT4A1|25830|sulfotransferase family 4A, member 1##NM_014351|SULT4A1|25830|sulfotransferase family 4A, member 1##BC030665|SULT4A1|25830|sulfotransferase family 4A, member 1##BC039315|EFCAB6|64800|EF-hand calcium binding domain 6##AK296679|EFCAB6|64800|EF-hand calcium binding domain 6##AK292498|EFCAB6|64800|EF-hand calcium binding domain 6##AK292411|EFCAB6|64800|EF-hand calcium binding domain 6##AK058069|EFCAB6|64800|EF-hand calcium binding domain 6##NM_022785|EFCAB6|64800|EF-hand calcium binding domain 6##NM_198856|EFCAB6|64800|EF-hand calcium binding domain 6##AK289774|MPPED1|758|metallophosphoesterase domain containing 1##BC104839|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC104843|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC143696|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC031820|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK056648|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK127172|PNPLA5|150379|patatin-like phospholipase domain containing 5##NM_001177675|PNPLA5|150379|patatin-like phospholipase domain containing 5##NM_138814|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK025665|PNPLA3|80339|patatin-like phospholipase domain containing 3##AL138578|PNPLA3|80339|patatin-like phospholipase domain containing 3##NM_025225|PNPLA3|80339|patatin-like phospholipase domain containing 3##AK123806|PNPLA3|80339|patatin-like phospholipase domain containing 3##AK315166|PNPLA3|80339|patatin-like phospholipase domain containing 3	0.958241	CTCF.p2:-1:0.958
chr7	17048786	17048945	reg1020279.p1	6.942	+	AY359065 BC058284 NM_176813	-127261	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-204194	-	TSC_hg19_v1_chr7_+_16793401 AK093487 NM_014399 AK026587 AK075475 AK316595 AY358995 AF100759 BC033863 AF120265 DQ892059 DQ895252 CR542107	-255409	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	289404	+	TSC_hg19_v1_chr7_+_17382906 BC021696	334041	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	931184	-	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK093487|TSPAN13|27075|tetraspanin 13##NM_014399|TSPAN13|27075|tetraspanin 13##AK026587|TSPAN13|27075|tetraspanin 13##AK075475|TSPAN13|27075|tetraspanin 13##AK316595|TSPAN13|27075|tetraspanin 13##AY358995|TSPAN13|27075|tetraspanin 13##AF100759|TSPAN13|27075|tetraspanin 13##BC033863|TSPAN13|27075|tetraspanin 13##AF120265|TSPAN13|27075|tetraspanin 13##DQ892059|TSPAN13|27075|tetraspanin 13##DQ895252|TSPAN13|27075|tetraspanin 13##CR542107|TSPAN13|27075|tetraspanin 13##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13	0.077338	
chr8	96172399	96172547	reg1020605.p2	6.942	+	TSC_hg19_v1_chr8_+_96146116 AK023249	-26337	+	TSC_hg19_v1_chr8_+_96146012 AL834473 BC011806	-26465	+	TSC_hg19_v1_chr8_+_96145948 NM_024613	-26528	+	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	108578	+	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	108992	-	BC127948 BC127947 AJ537424 NM_001001557	1000508	-	AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##AL834473|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC011806|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6	0.868394	CTCF.p2:-12:0.220	CTCF.p2:59:0.648
chr1	143646178	143646280	reg1020593.p2	6.941	+	TSC_hg19_v1_chr1_-_143467618 BC070106	-178604	-	CR936796 TSC_hg19_v1_chr1_+_142618815 AK056396 AF277188	-1027383	+	AK291502 AK307244 AK311502 NM_001004340 NM_001017986 NM_001244910 TSC_hg19_v1_chr1_-_120935945	-22710277	-	BC071624 BC132962 AK097058 AK310056 TSC_hg19_v1_chr1_-_143744413 AK310186 AK309393	98176	-	HQ258079 BC130376 BC130378 NM_001123068	121635	-	AK307197 TSC_hg19_v1_chr1_-_143913122 AB096683 NM_207418	266901	-	AK291502|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK307244|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK311502|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001004340|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001017986|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001244910|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##BC071624|FLJ39739|388685|uncharacterized FLJ39739##BC132962|LOC100286793|100286793|uncharacterized LOC100286793##AK097058|FLJ39739|388685|uncharacterized FLJ39739##AK310056|FLJ39739|388685|uncharacterized FLJ39739##AK310186|FLJ39739|388685|uncharacterized FLJ39739##AK309393|FLJ39739|388685|uncharacterized FLJ39739##HQ258079|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##NM_001123068|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##AK307197|FAM72D|728833|family with sequence similarity 72, member D##AB096683|FAM72D|728833|family with sequence similarity 72, member D##NM_207418|FAM72D|728833|family with sequence similarity 72, member D	0.031854	
chr15	78195377	78195479	reg1019729.p1	6.941	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-270648	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-270729	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-482166	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	174525	-	NM_001101404	189498	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	228334	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.99941	CTCF.p2:-23:0.999
chr2	158449612	158449752	reg1021109.p1	6.941	+	L06633 AB528875 CU690346 AF068836 BC036449 TSC_hg19_v1_chr2_-_158300602 AK312753 NM_004288	-149118	-	NM_001009959 AK296477	-265526	-	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	-267398	-	TSC_hg19_v1_chr2_-_158454049 AF525679 NM_001111031	4393	-	AB590288 CU692676 DQ895570 EU176205 AF525680 AF525681 AY127050 TSC_hg19_v1_chr2_-_158485239	35516	-	BC022530 NM_001111032 NM_001111033 NM_145259 TSC_hg19_v1_chr2_-_158485400	35715	-	L06633|CYTIP|9595|cytohesin 1 interacting protein##AF068836|CYTIP|9595|cytohesin 1 interacting protein##BC036449|CYTIP|9595|cytohesin 1 interacting protein##AK312753|CYTIP|9595|cytohesin 1 interacting protein##NM_004288|CYTIP|9595|cytohesin 1 interacting protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##AF525679|ACVR1C|130399|activin A receptor, type IC##NM_001111031|ACVR1C|130399|activin A receptor, type IC##DQ895570|ACVR1C|130399|activin A receptor, type IC##EU176205|ACVR1C|130399|activin A receptor, type IC##AF525680|ACVR1C|130399|activin A receptor, type IC##AF525681|ACVR1C|130399|activin A receptor, type IC##AY127050|ACVR1C|130399|activin A receptor, type IC##BC022530|ACVR1C|130399|activin A receptor, type IC##NM_001111032|ACVR1C|130399|activin A receptor, type IC##NM_001111033|ACVR1C|130399|activin A receptor, type IC##NM_145259|ACVR1C|130399|activin A receptor, type IC	0.089648	
chr3	10240822	10240972	reg1018341.p2	6.941	+	NM_001570 BC125184 AK299033 AK312841 TSC_hg19_v1_chr3_+_10206602 AF026273 AB587544 AJ496794	-34297	+	TSC_hg19_v1_chr3_+_10183517 AB528056	-57359	+	AK304002 TSC_hg19_v1_chr3_+_10183487	-57399	+	TSC_hg19_v1_chr3_+_10290182 NM_014760	49278	+	TSC_hg19_v1_chr3_+_10290210 D86972	49365	+	TSC_hg19_v1_chr3_+_10290370 AK289794 BC090935 BC101776 BC101770	49625	+	NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2##BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK304002|VHL|7428|von Hippel-Lindau tumor suppressor##NM_014760|TATDN2|9797|TatD DNase domain containing 2##D86972|TATDN2|9797|TatD DNase domain containing 2##AK289794|TATDN2|9797|TatD DNase domain containing 2##BC090935|TATDN2|9797|TatD DNase domain containing 2##BC101776|TATDN2|9797|TatD DNase domain containing 2##BC101770|TATDN2|9797|TatD DNase domain containing 2	0.0	
chr10	24808053	24808174	reg1020754.p1	6.940	+	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	-52644	+	TSC_hg19_v1_chr10_+_24755441 AK300422	-52669	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	-310019	+	AK307604 TSC_hg19_v1_chr10_-_25012174	204060	-	AF480466 NM_020824 TSC_hg19_v1_chr10_-_25012632	204493	-	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	433419	-	BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217##AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21##AF480466|ARHGAP21|57584|Rho GTPase activating protein 21##NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21##AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1	1.028455	CTCF.p2:6:0.999
chr16	77203701	77203810	reg1020745.p2	6.940	+	NM_138994 AK057327 BC017266	-860000	+	AB051550 NM_033401 TSC_hg19_v1_chr16_+_76311298	-892515	+	AK307901 NM_018975 TSC_hg19_v1_chr16_+_75681715 AK000669 BC022428 BC004465 BC005841 BC016739 BC078171 AF289599 AF250393 AB464292 CU678732 AF262988	-1522048	+	TSC_hg19_v1_chr16_+_77224857 BC024277 NM_014940	21087	+	AK023374 TSC_hg19_v1_chr16_+_77224865	21130	+	TSC_hg19_v1_chr16_+_77225092 AK023896 AK296467	21319	+	NM_138994|CNTNAP4|85445|contactin associated protein-like 4##AK057327|CNTNAP4|85445|contactin associated protein-like 4##BC017266|CNTNAP4|85445|contactin associated protein-like 4##AB051550|CNTNAP4|85445|contactin associated protein-like 4##NM_033401|CNTNAP4|85445|contactin associated protein-like 4##AK307901|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##NM_018975|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AK000669|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC022428|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC004465|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC005841|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC016739|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC078171|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF289599|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF250393|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF262988|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC024277|MON1B|22879|MON1 homolog B (yeast)##NM_014940|MON1B|22879|MON1 homolog B (yeast)##AK023374|MON1B|22879|MON1 homolog B (yeast)##AK023896|MON1B|22879|MON1 homolog B (yeast)##AK296467|MON1B|22879|MON1 homolog B (yeast)	0.957033	CTCF.p2:-14:0.957
chr3	158635816	158635940	reg1018090.p1	6.940	+	TSC_hg19_v1_chr3_+_158519925 AK301680	-115944	+	AK024215 AK300497 TSC_hg19_v1_chr3_+_158519911	-115962	+	TSC_hg19_v1_chr3_+_158519899 AK297034 BC042197	-115983	+	NM_001042705 NM_001042706 NM_001197100 NM_001197113 NM_001197114 AK309049 DQ309553 DQ309554 TSC_hg19_v1_chr3_+_158787130 AK096479	151209	+	TSC_hg19_v1_chr3_+_158787146 BC137464 BC137469 BC144658	151273	+	BC036535 NM_001197107 NM_001197108 NM_014575 TSC_hg19_v1_chr3_+_158991047	355164	+	AK301680|MFSD1|64747|major facilitator superfamily domain containing 1##AK024215|MFSD1|64747|major facilitator superfamily domain containing 1##AK300497|MFSD1|64747|major facilitator superfamily domain containing 1##AK297034|MFSD1|64747|major facilitator superfamily domain containing 1##BC042197|MFSD1|64747|major facilitator superfamily domain containing 1##NM_001042705|IQCJ|654502|IQ motif containing J##NM_001042706|IQCJ|654502|IQ motif containing J##NM_001197100|IQCJ|654502|IQ motif containing J##NM_001197113|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##NM_001197114|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##AK309049|IQCJ|654502|IQ motif containing J##DQ309553|IQCJ|654502|IQ motif containing J##DQ309554|IQCJ|654502|IQ motif containing J##AK096479|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##BC137464|IQCJ|654502|IQ motif containing J##BC137469|IQCJ|654502|IQ motif containing J##BC144658|IQCJ|654502|IQ motif containing J##BC036535|SCHIP1|29970|schwannomin interacting protein 1##NM_001197107|SCHIP1|29970|schwannomin interacting protein 1##NM_001197108|SCHIP1|29970|schwannomin interacting protein 1##NM_014575|SCHIP1|29970|schwannomin interacting protein 1	0.990064	CTCF.p2:4:0.990
chr9	130705175	130705312	reg1004586.p2	6.940	+	BC015233 NM_003863	-4481	-	TSC_hg19_v1_chr9_-_130700134 AF061729 BC107863 AB013361 AK312121	-5100	-	TSC_hg19_v1_chr9_-_130700118 BC015374	-5136	-	BC137087 BC137088 BC047949 NM_203305 BC142952	7688	-	TSC_hg19_v1_chr9_-_130742813 AK058004 NM_001035254	37566	-	AK122729 NM_197956	124355	-	BC015233|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##NM_003863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AF061729|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##BC107863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AB013361|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK312121|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##BC015374|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##BC137087|FAM102A|399665|family with sequence similarity 102, member A##BC137088|FAM102A|399665|family with sequence similarity 102, member A##BC047949|FAM102A|399665|family with sequence similarity 102, member A##NM_203305|FAM102A|399665|family with sequence similarity 102, member A##BC142952|FAM102A|399665|family with sequence similarity 102, member A##AK058004|FAM102A|399665|family with sequence similarity 102, member A##NM_001035254|FAM102A|399665|family with sequence similarity 102, member A##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1	0.98008	CTCF.p2:-10:0.980
chr5	54703054	54703162	reg1022481.p1	6.939	+	AK291649 AK304788 TSC_hg19_v1_chr5_+_54603828 D29641 BC065258 AB527662	-99274	+	TSC_hg19_v1_chr5_+_54603816 BC104996 BC113509 BC028604	-99302	+	NM_015360 BC105291 BX640789	-99513	+	BC040295 CU691780 AB000888 BC117133 BC143281 BC168254 TSC_hg19_v1_chr5_-_54830793 AF017116 BC039847 AF014402 AF014403 BC008787 NM_003711 NM_176895	127560	-	TSC_hg19_v1_chr5_-_55008090 BC101361 BC101362 AK075190	304978	-	TSC_hg19_v1_chr5_-_55008148 AK122957 BC066891 NM_173514	305040	-	AK291649|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##AK304788|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##D29641|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC065258|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC104996|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC113509|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC028604|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##NM_015360|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC105291|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BX640789|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC040295|RNF138P1|379013|ring finger protein 138 pseudogene 1##AB000888|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC117133|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC143281|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC168254|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF017116|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC039847|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF014402|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF014403|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC008787|PPAP2A|8611|phosphatidic acid phosphatase type 2A##NM_003711|PPAP2A|8611|phosphatidic acid phosphatase type 2A##NM_176895|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC101361|SLC38A9|153129|solute carrier family 38, member 9##BC101362|SLC38A9|153129|solute carrier family 38, member 9##AK075190|SLC38A9|153129|solute carrier family 38, member 9##AK122957|SLC38A9|153129|solute carrier family 38, member 9##BC066891|SLC38A9|153129|solute carrier family 38, member 9##NM_173514|SLC38A9|153129|solute carrier family 38, member 9	0.874616	CTCF.p2:-14:0.875
chr7	33225456	33225570	reg1020039.p1	6.939	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-56432	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-76536	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-123191	-	AK289963 NM_133468 AK096150 BC060868	719629	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	1472406	+	DQ287932 NM_015283	1852139	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	0.980305	CTCF.p2:-5:0.980
chr10	25402211	25402318	reg1020790.p2	6.938	+	NM_024838 TSC_hg19_v1_chr10_+_25305540 AK125249 BC035132 BX647989	-96714	+	CU693144 DQ892076 DQ895269 BC064597 AK095021 NM_145010 AY454125 AK292495 BC026165	-97290	-	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	-160732	-	AY528411 NM_020752	62025	+	NM_017433	820737	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	820916	+	NM_024838|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AK125249|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BC035132|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BX647989|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##DQ892076|ENKUR|219670|enkurin, TRPC channel interacting protein##DQ895269|ENKUR|219670|enkurin, TRPC channel interacting protein##AK095021|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_145010|ENKUR|219670|enkurin, TRPC channel interacting protein##AY454125|ENKUR|219670|enkurin, TRPC channel interacting protein##AK292495|ENKUR|219670|enkurin, TRPC channel interacting protein##BC026165|ENKUR|219670|enkurin, TRPC channel interacting protein##AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AY528411|GPR158|57512|G protein-coupled receptor 158##NM_020752|GPR158|57512|G protein-coupled receptor 158##NM_017433|MYO3A|53904|myosin IIIA##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA	1.097053	CTCF.p2:-5:0.995
chr17	61775380	61775511	reg1019973.p2	6.938	+	TSC_hg19_v1_chr17_+_61699786 BC090859 NM_002401 NM_203351 AL834303	-75647	+	TSC_hg19_v1_chr17_+_61699785 AK225784	-75661	+	TSC_hg19_v1_chr17_+_61699772 AX775739 AX775741 AK315305	-75699	+	BC025738 TSC_hg19_v1_chr17_-_61777476	2026	-	TSC_hg19_v1_chr17_-_61777486 AK092301 AX747464 BC004400 NM_030576 AY037154	2073	-	BC043641 TSC_hg19_v1_chr17_-_61819160 AL832407 AK301331 AK075005	43696	-	BC090859|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##NM_002401|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##NM_203351|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AL834303|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AK225784|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AX775739|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AX775741|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AK315305|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##BC025738|LIMD2|80774|LIM domain containing 2##AK092301|LIMD2|80774|LIM domain containing 2##BC004400|LIMD2|80774|LIM domain containing 2##NM_030576|LIMD2|80774|LIM domain containing 2##AY037154|LIMD2|80774|LIM domain containing 2##BC043641|STRADA|92335|STE20-related kinase adaptor alpha##AL832407|STRADA|92335|STE20-related kinase adaptor alpha##AK301331|STRADA|92335|STE20-related kinase adaptor alpha##AK075005|STRADA|92335|STE20-related kinase adaptor alpha	0.970599	CTCF.p2:0:0.971
chr3	67160288	67160440	reg1025504.p1	6.938	+	NM_032505 AK096640 AK300397	-111636	+	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	-608900	-	AF381545 BC140907 NM_015541 AY730707	-609512	-	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	544698	-	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	544786	+	AY325114 NM_001252216	880369	+	NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AY325114|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##NM_001252216|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1	0.0	
chr3	70157349	70157461	reg1020206.p2	6.938	+	TSC_hg19_v1_chr3_+_70048883 BC015590	-108517	+	NM_000248 NM_001184968 NM_198158 NM_198178 Z29678 BC012503 BC065243 BC026961 GU355676	-171594	+	NM_198177 AB006989 AK297858	-242004	+	TSC_hg19_v1_chr3_-_71114076 AK074569 NM_001244813	956791	-	TSC_hg19_v1_chr3_-_71179732 AK027264	1022318	-	AK297649 TSC_hg19_v1_chr3_-_71179738 BX647682	1022335	-	NM_000248|MITF|4286|microphthalmia-associated transcription factor##NM_001184968|MITF|4286|microphthalmia-associated transcription factor##NM_198158|MITF|4286|microphthalmia-associated transcription factor##NM_198178|MITF|4286|microphthalmia-associated transcription factor##Z29678|MITF|4286|microphthalmia-associated transcription factor##BC012503|MITF|4286|microphthalmia-associated transcription factor##BC065243|MITF|4286|microphthalmia-associated transcription factor##BC026961|MITF|4286|microphthalmia-associated transcription factor##GU355676|MITF|4286|microphthalmia-associated transcription factor##NM_198177|MITF|4286|microphthalmia-associated transcription factor##AB006989|MITF|4286|microphthalmia-associated transcription factor##AK297858|MITF|4286|microphthalmia-associated transcription factor##AK074569|FOXP1|27086|forkhead box P1##NM_001244813|FOXP1|27086|forkhead box P1##AK027264|FOXP1|27086|forkhead box P1##AK297649|FOXP1|27086|forkhead box P1##BX647682|FOXP1|27086|forkhead box P1	0.0	
chr11	44155011	44155130	reg1019741.p1	6.937	+	NM_000401 BX648142	-37311	+	BC068545 TSC_hg19_v1_chr11_+_44117272 U72263 BC013050	-37799	+	NM_001178083 NM_207122 U62740 TSC_hg19_v1_chr11_+_44117224 AK312375 BC010058 AK296713	-37896	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	176606	-	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	432095	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	432157	+	NM_000401|EXT2|2132|exostosin 2##BX648142|EXT2|2132|exostosin 2##BC068545|EXT2|2132|exostosin 2##U72263|EXT2|2132|exostosin 2##BC013050|EXT2|2132|exostosin 2##NM_001178083|EXT2|2132|exostosin 2##NM_207122|EXT2|2132|exostosin 2##U62740|EXT2|2132|exostosin 2##AK312375|EXT2|2132|exostosin 2##BC010058|EXT2|2132|exostosin 2##AK296713|EXT2|2132|exostosin 2##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule	0.699531	CTCF.p2:16:0.700
chr12	103210740	103210844	reg1019362.p2	6.937	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-336410	-	M11568 TSC_hg19_v1_chr12_-_102874344	-336450	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-336470	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	100174	-	TSC_hg19_v1_chr12_-_103311062 BC026251	100271	-	L47726 NM_000277 U49897	100588	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.0	
chr7	71959202	71959320	reg1018955.p1	6.937	+	NM_031468	-81902	-	NM_001017440 TSC_hg19_v1_chr7_-_71802376	-156957	-	AK123862 TSC_hg19_v1_chr7_-_71801809	-157483	-	AK303225 AK309556 AK301471 BC068520 AK310913 NM_001145440 NM_001145441	339521	-	TSC_hg19_v1_chr7_+_72300065 BC010183	340838	+	TSC_hg19_v1_chr7_+_72349925 AB014518 NM_172020	390674	+	NM_031468|CALN1|83698|calneuron 1##NM_001017440|CALN1|83698|calneuron 1##AK123862|CALN1|83698|calneuron 1##AK303225|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK309556|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK301471|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##BC068520|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK310913|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145440|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145441|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1##AB014518|POM121|9883|POM121 membrane glycoprotein##NM_172020|POM121|9883|POM121 membrane glycoprotein	0.999638	CTCF.p2:0:1.000
chr12	106099701	106099787	reg1006065.p2	6.936	+	AJ311378 TSC_hg19_v1_chr12_+_105724640	-375105	+	TSC_hg19_v1_chr12_+_105724468 BC013920 NM_001145199 BC067897 BC045812 BC061920 AK056999 AJ311377	-375273	+	CU689714 AB527678 DQ892107 DQ895301 TSC_hg19_v1_chr12_-_105629989 AK001521 AK290562 AK297100 BC033731 BC028008 AY113704 NM_001251904 NM_018171	-469834	-	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	432938	-	AB011109 BC152462 NM_014840	434066	-	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	542103	-	AJ311378|C12orf75|387882|chromosome 12 open reading frame 75##BC013920|C12orf75|387882|chromosome 12 open reading frame 75##NM_001145199|C12orf75|387882|chromosome 12 open reading frame 75##BC067897|C12orf75|387882|chromosome 12 open reading frame 75##BC045812|C12orf75|387882|chromosome 12 open reading frame 75##BC061920|C12orf75|387882|chromosome 12 open reading frame 75##AK056999|C12orf75|387882|chromosome 12 open reading frame 75##AJ311377|C12orf75|387882|chromosome 12 open reading frame 75##DQ892107|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##DQ895301|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK001521|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK290562|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK297100|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC033731|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC028008|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AY113704|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251904|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_018171|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4	0.120072	
chr1	210621796	210621922	reg1017075.p1	6.936	+	NM_001170580 BC051191	-119218	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	-119594	+	NM_001122834 NM_001170564 AK297193	-120263	+	AF078741 AF078742 BC113709 BC143599 TSC_hg19_v1_chr1_-_211307437 AJ001366 NM_002238 NM_172362	685526	-	TSC_hg19_v1_chr1_+_211432710 NM_001136223 NM_001136224 NM_001136225	810849	+	TSC_hg19_v1_chr1_+_211432726 AK131312	810868	+	NM_001170580|HHAT|55733|hedgehog acyltransferase##BC051191|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase##NM_001122834|HHAT|55733|hedgehog acyltransferase##NM_001170564|HHAT|55733|hedgehog acyltransferase##AK297193|HHAT|55733|hedgehog acyltransferase##AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_001136223|RCOR3|55758|REST corepressor 3##NM_001136224|RCOR3|55758|REST corepressor 3##NM_001136225|RCOR3|55758|REST corepressor 3##AK131312|RCOR3|55758|REST corepressor 3	0.993382	CTCF.p2:-30:0.993
chr1	228401291	228401381	reg1019213.p1	6.936	+	TSC_hg19_v1_chr1_+_228395744 NM_001098623 NM_052843	-5536	+	TSC_hg19_v1_chr1_+_228353834 AK022796	-47475	+	NM_001010867 TSC_hg19_v1_chr1_+_228353504 BC028052	-47864	+	TSC_hg19_v1_chr1_-_228401360 BC027909 AK056556	23	-	TSC_hg19_v1_chr1_-_228463735 AK294019	62411	-	TSC_hg19_v1_chr1_-_228594537 AK314539 AK074866 BC069227 AF327056 NM_145214	193166	-	NM_001098623|OBSCN|84033|obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF##NM_052843|OBSCN|84033|obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF##AK022796|IBA57|200205|IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)##NM_001010867|IBA57|200205|IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)##BC028052|IBA57|200205|IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)##BC027909|C1orf145|574407|chromosome 1 open reading frame 145##AK056556|C1orf145|574407|chromosome 1 open reading frame 145##AK314539|TRIM11|81559|tripartite motif containing 11##AK074866|TRIM11|81559|tripartite motif containing 11##BC069227|TRIM11|81559|tripartite motif containing 11##AF327056|TRIM11|81559|tripartite motif containing 11##NM_145214|TRIM11|81559|tripartite motif containing 11	0.749005	CTCF.p2:38:0.749
chr18	65183269	65183403	reg1020692.p1	6.936	+	AK021849 TSC_hg19_v1_chr18_-_65182656	-753	-	AJ007607 NM_021153 AK304000 AK315257 BC015877	-912025	-	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-1765134	+	TSC_hg19_v1_chr18_-_65183956 NM_032160	610	-	AM393206 AM393295 CU689334 TSC_hg19_v1_chr18_-_66382307 AK307269 AK295551 BC032325 AL832341 AL832356 BC093792 BC093794 BC143400 AB058733	1198930	-	TSC_hg19_v1_chr18_-_66382346 AK122715 BC107422 NM_019022 BX647846 AK310389	1199100	-	AK021849|DSEL|92126|dermatan sulfate epimerase-like##AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##NM_032160|DSEL|92126|dermatan sulfate epimerase-like##AM393206|TMX3|54495|thioredoxin-related transmembrane protein 3##AM393295|TMX3|54495|thioredoxin-related transmembrane protein 3##AK307269|TMX3|54495|thioredoxin-related transmembrane protein 3##AK295551|TMX3|54495|thioredoxin-related transmembrane protein 3##BC032325|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832341|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832356|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093792|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093794|TMX3|54495|thioredoxin-related transmembrane protein 3##BC143400|TMX3|54495|thioredoxin-related transmembrane protein 3##AB058733|TMX3|54495|thioredoxin-related transmembrane protein 3##AK122715|TMX3|54495|thioredoxin-related transmembrane protein 3##BC107422|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_019022|TMX3|54495|thioredoxin-related transmembrane protein 3##BX647846|TMX3|54495|thioredoxin-related transmembrane protein 3##AK310389|TMX3|54495|thioredoxin-related transmembrane protein 3	0.807296	CTCF.p2:6:0.807
chr19	41324656	41324780	reg1018764.p2	6.936	+	NM_053046 BC036051 AK098182	-19327	+	TSC_hg19_v1_chr19_+_41305105 AK074408 BC001723	-19595	+	TSC_hg19_v1_chr19_+_41305091 NM_080732 AL832506	-19652	+	X13929 X13897 AF182275 M33318 X13930 BC096253 BC096254 BC096255 BC096256 AK309594 TSC_hg19_v1_chr19_-_41356353 AK307740 AK312964 NM_000762	31556	-	NM_000764 NM_030589	63938	-	AK307933 AK310944 TSC_hg19_v1_chr19_+_41430151 BC041174 M29873 DQ198366 DQ198367	105432	+	NM_053046|EGLN2|112398|egl nine homolog 2 (C. elegans)##BC036051|EGLN2|112398|egl nine homolog 2 (C. elegans)##AK098182|EGLN2|112398|egl nine homolog 2 (C. elegans)##AK074408|EGLN2|112398|egl nine homolog 2 (C. elegans)##BC001723|EGLN2|112398|egl nine homolog 2 (C. elegans)##NM_080732|EGLN2|112398|egl nine homolog 2 (C. elegans)##AL832506|EGLN2|112398|egl nine homolog 2 (C. elegans)##X13929|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##X13897|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AF182275|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##M33318|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096253|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096254|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096255|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##BC096256|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK309594|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK307740|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##AK312964|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##NM_000762|CYP2A6|1548|cytochrome P450, family 2, subfamily A, polypeptide 6##NM_000764|CYP2A7|1549|cytochrome P450, family 2, subfamily A, polypeptide 7##NM_030589|CYP2A7|1549|cytochrome P450, family 2, subfamily A, polypeptide 7##AK307933|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##AK310944|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##BC041174|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##M29873|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##DQ198366|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1##DQ198367|CYP2B7P1|1556|cytochrome P450, family 2, subfamily B, polypeptide 7 pseudogene 1	0.0	
chr19	49149882	49150014	reg1020361.p2	6.935	+	AF067662 AB018195 TSC_hg19_v1_chr19_-_49149299 AY358967 NM_001217	-597	-	AB208807 TSC_hg19_v1_chr19_-_49140623 BC011965 U79283 AK310025 NM_001352	-9344	-	BC010671 NM_001204160 EF107108 AK125560	-21702	+	BC018654 BC018697 BC033207 NM_145807 BC021210	26325	-	NM_000511 NM_001097638 AK290277 D87942 BC001899 BC121066	49313	+	AK093389 AX748093 NM_182574 BC106047	70297	-	AF067662|CA11|770|carbonic anhydrase XI##AB018195|CA11|770|carbonic anhydrase XI##AY358967|CA11|770|carbonic anhydrase XI##NM_001217|CA11|770|carbonic anhydrase XI##AB208807|DBP|1628|D site of albumin promoter (albumin D-box) binding protein##BC011965|DBP|1628|D site of albumin promoter (albumin D-box) binding protein##U79283|DBP|1628|D site of albumin promoter (albumin D-box) binding protein##AK310025|DBP|1628|D site of albumin promoter (albumin D-box) binding protein##NM_001352|DBP|1628|D site of albumin promoter (albumin D-box) binding protein##BC010671|SPHK2|56848|sphingosine kinase 2##NM_001204160|SPHK2|56848|sphingosine kinase 2##EF107108|SPHK2|56848|sphingosine kinase 2##AK125560|SPHK2|56848|sphingosine kinase 2##BC018654|NTN5|126147|netrin 5##BC018697|NTN5|126147|netrin 5##BC033207|NTN5|126147|netrin 5##NM_145807|NTN5|126147|netrin 5##BC021210|NTN5|126147|netrin 5##NM_000511|FUT2|2524|fucosyltransferase 2 (secretor status included)##NM_001097638|FUT2|2524|fucosyltransferase 2 (secretor status included)##AK290277|FUT2|2524|fucosyltransferase 2 (secretor status included)##D87942|FUT2|2524|fucosyltransferase 2 (secretor status included)##BC001899|FUT2|2524|fucosyltransferase 2 (secretor status included)##BC121066|FUT2|2524|fucosyltransferase 2 (secretor status included)##AK093389|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator##NM_182574|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator##BC106047|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator	0.52522	CTCF.p2:-6:0.525
chr2	156967477	156967617	reg1021390.p1	6.935	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-1412358	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-2239103	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-2632296	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	219143	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	221616	-	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	324411	+	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	0.0	
chr12	108731224	108731340	reg1020661.p1	6.934	+	NM_001142345	-16844	-	BC110330 AB018332 NM_014653	-207795	+	AY238895 NM_203436	-563121	+	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	1802	-	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	177800	+	AB385287 D63879 TSC_hg19_v1_chr12_-_108954936 BC103706 BC093784 BC111983 BC143253 BC004547 BC024279 AB020880 AF387506 BC032601	223652	-	NM_001142345|CMKLR1|1240|chemokine-like receptor 1##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing##D63879|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC103706|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC093784|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC111983|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC143253|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC004547|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC024279|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AB020880|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AF387506|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC032601|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3	0.045758	
chr19	19496142	19496272	reg1019912.p1	6.934	+	TSC_hg19_v1_chr19_+_19431662 AB385396	-64543	+	TSC_hg19_v1_chr19_+_19431637 NM_015329 AB020699	-64573	+	AK096152 AK292085 AK294618 AK301119 BC119728 BC119729 BC142988 TSC_hg19_v1_chr19_-_19431319 NM_172231	-64856	-	TSC_hg19_v1_chr19_+_19496634 NM_017660 AK303482	499	+	AB464723 DQ891603 DQ894797 AF329483 AK058166 AK313767 BC014611 NM_032037 AF348077	130158	-	TSC_hg19_v1_chr19_+_19626536 AF261134	130358	+	NM_015329|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AB020699|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AK096152|SUGP1|57794|SURP and G patch domain containing 1##AK292085|SUGP1|57794|SURP and G patch domain containing 1##AK294618|SUGP1|57794|SURP and G patch domain containing 1##AK301119|SUGP1|57794|SURP and G patch domain containing 1##BC119728|SUGP1|57794|SURP and G patch domain containing 1##BC119729|SUGP1|57794|SURP and G patch domain containing 1##BC142988|SUGP1|57794|SURP and G patch domain containing 1##NM_172231|SUGP1|57794|SURP and G patch domain containing 1##NM_017660|GATAD2A|54815|GATA zinc finger domain containing 2A##AK303482|GATAD2A|54815|GATA zinc finger domain containing 2A##DQ891603|TSSK6|83983|testis-specific serine kinase 6##DQ894797|TSSK6|83983|testis-specific serine kinase 6##AF329483|TSSK6|83983|testis-specific serine kinase 6##AK058166|TSSK6|83983|testis-specific serine kinase 6##AK313767|TSSK6|83983|testis-specific serine kinase 6##BC014611|TSSK6|83983|testis-specific serine kinase 6##NM_032037|TSSK6|83983|testis-specific serine kinase 6##AF348077|TSSK6|83983|testis-specific serine kinase 6##AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	0.012363	
chr5	72512003	72512133	reg1016833.p1	6.934	+	AK315460 NM_153217 AK055830	-43037	+	TSC_hg19_v1_chr5_+_72416401 NM_001161342 NM_173490 BC018083	-95632	+	TSC_hg19_v1_chr5_+_72251897 AK291782 BC006004 AK295141 BC014311 AL831971 AM393291 AM393840 CU676963	-260167	+	U13222 TSC_hg19_v1_chr5_-_72743884	231791	-	NM_004472 U59832 TSC_hg19_v1_chr5_-_72744463	232341	-	TSC_hg19_v1_chr5_+_72794266 NM_001037637 NM_001207 AK310919 AK225964 AK291125	282191	+	AK315460|TMEM174|134288|transmembrane protein 174##NM_153217|TMEM174|134288|transmembrane protein 174##AK055830|TMEM174|134288|transmembrane protein 174##NM_001161342|TMEM171|134285|transmembrane protein 171##NM_173490|TMEM171|134285|transmembrane protein 171##BC018083|TMEM171|134285|transmembrane protein 171##AK291782|FCHO2|115548|FCH domain only 2##BC006004|FCHO2|115548|FCH domain only 2##AK295141|FCHO2|115548|FCH domain only 2##BC014311|FCHO2|115548|FCH domain only 2##AL831971|FCHO2|115548|FCH domain only 2##AM393291|FCHO2|115548|FCH domain only 2##AM393840|FCHO2|115548|FCH domain only 2##U13222|FOXD1|2297|forkhead box D1##NM_004472|FOXD1|2297|forkhead box D1##U59832|FOXD1|2297|forkhead box D1##NM_001037637|BTF3|689|basic transcription factor 3##NM_001207|BTF3|689|basic transcription factor 3##AK310919|BTF3|689|basic transcription factor 3##AK225964|BTF3|689|basic transcription factor 3##AK291125|BTF3|689|basic transcription factor 3	0.612573	CTCF.p2:-18:0.613
chr9	22119676	22119808	reg1021702.p1	6.934	+	TSC_hg19_v1_chr9_+_22113543 BC038540	-6133	+	AF004819 U17075 L36844 BC014469 TSC_hg19_v1_chr9_-_22009305 NM_004936 NM_078487	-110452	-	TSC_hg19_v1_chr9_-_21994420 AB464504 S78535 NM_058195 U38945	-125291	-	TSC_hg19_v1_chr9_+_22446846 AK096011 NM_022160 BC130435 BC130437	327095	+	AB464510 TSC_hg19_v1_chr9_+_22447162	327371	+	AJ290954 TSC_hg19_v1_chr9_+_22447458 AK130018	327707	+	BC038540|CDKN2B-AS|100048912|CDKN2B antisense RNA (non-protein coding)##AF004819|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##U17075|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##L36844|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##BC014469|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##NM_004936|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##NM_078487|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##S78535|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_058195|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##U38945|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##AK096011|DMRTA1|63951|DMRT-like family A1##NM_022160|DMRTA1|63951|DMRT-like family A1##BC130435|DMRTA1|63951|DMRT-like family A1##BC130437|DMRTA1|63951|DMRT-like family A1##AJ290954|DMRTA1|63951|DMRT-like family A1##AK130018|DMRTA1|63951|DMRT-like family A1	0.305215	CTCF.p2:26:0.305
chr1	111764514	111764674	reg1002351.p2	6.933	+	TSC_hg19_v1_chr1_-_111747005 AK026110	-17619	-	TSC_hg19_v1_chr1_-_111743297 AK301583	-21284	-	TSC_hg19_v1_chr1_-_111743272 BC004557 NM_024901	-21324	-	NM_001025197 NM_004000 U58514 U49835 BC011460 BT006767 DQ893705 CU679936	5722	+	NM_001025199 U58515 AK298466 AK223316	7798	+	AK290702 AB025008 AB025009 AY825504 NM_021797 AF290004 AY789444 NM_201653	68911	+	AK026110|DENND2D|79961|DENN/MADD domain containing 2D##AK301583|DENND2D|79961|DENN/MADD domain containing 2D##BC004557|DENND2D|79961|DENN/MADD domain containing 2D##NM_024901|DENND2D|79961|DENN/MADD domain containing 2D##NM_001025197|CHI3L2|1117|chitinase 3-like 2##NM_004000|CHI3L2|1117|chitinase 3-like 2##U58514|CHI3L2|1117|chitinase 3-like 2##U49835|CHI3L2|1117|chitinase 3-like 2##BC011460|CHI3L2|1117|chitinase 3-like 2##BT006767|CHI3L2|1117|chitinase 3-like 2##DQ893705|CHI3L2|1117|chitinase 3-like 2##NM_001025199|CHI3L2|1117|chitinase 3-like 2##U58515|CHI3L2|1117|chitinase 3-like 2##AK298466|CHI3L2|1117|chitinase 3-like 2##AK223316|CHI3L2|1117|chitinase 3-like 2##AK290702|CHIA|27159|chitinase, acidic##AB025008|CHIA|27159|chitinase, acidic##AB025009|CHIA|27159|chitinase, acidic##AY825504|CHIA|27159|chitinase, acidic##NM_021797|CHIA|27159|chitinase, acidic##AF290004|CHIA|27159|chitinase, acidic##AY789444|CHIA|27159|chitinase, acidic##NM_201653|CHIA|27159|chitinase, acidic	0.0	
chr14	34145368	34145476	reg1018432.p2	6.933	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-736932	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1346886	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-1598916	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	274727	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	786065	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	863463	-	AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein	0.756322	CTCF.p2:-6:0.756
chr2	113339957	113340085	reg1021312.p2	6.933	+	BX647360 BC110833 BC150139 AK294027 TSC_hg19_v1_chr2_+_113300041 AK001678 AK301178 AK022533 BX647683	-40102	+	AK128044 NM_001137604 NM_019014 AK302814	-40470	+	TSC_hg19_v1_chr2_+_113279582 AK126378	-60367	+	TSC_hg19_v1_chr2_+_113342023 AK024631 BC004498 NM_032309 AK312219	2017	+	AK096990 TSC_hg19_v1_chr2_+_113342182	2168	+	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	63499	+	BX647360|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BC110833|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BC150139|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK294027|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK001678|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK301178|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK022533|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BX647683|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK128044|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##NM_001137604|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##NM_019014|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK302814|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK126378|TTL|150465|tubulin tyrosine ligase##BC004498|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_032309|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK312219|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1	0.0	
chr4	16291654	16291770	reg1020885.p2	6.933	+	TSC_hg19_v1_chr4_+_16228615 AK093550 AX748197 BC010030	-63076	+	TSC_hg19_v1_chr4_+_16228285 AK096972 BC132927	-63417	+	TSC_hg19_v1_chr4_-_16228103 BC066899 NM_153365	-63575	-	AK300119 AB463834 DQ891981 DQ895171 AK312881 TSC_hg19_v1_chr4_-_16900210 AF068651 AF047337 AF064492 AF064493 BC034019	608414	-	AK226029 TSC_hg19_v1_chr4_-_16900258	608547	-	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	608673	-	AK093550|FLJ39653|202020|uncharacterized FLJ39653##BC010030|FLJ39653|202020|uncharacterized FLJ39653##AK096972|FLJ39653|202020|uncharacterized FLJ39653##BC132927|FLJ39653|202020|uncharacterized FLJ39653##BC066899|TAPT1|202018|transmembrane anterior posterior transformation 1##NM_153365|TAPT1|202018|transmembrane anterior posterior transformation 1##AK300119|LDB2|9079|LIM domain binding 2##DQ891981|LDB2|9079|LIM domain binding 2##DQ895171|LDB2|9079|LIM domain binding 2##AK312881|LDB2|9079|LIM domain binding 2##AF068651|LDB2|9079|LIM domain binding 2##AF047337|LDB2|9079|LIM domain binding 2##AF064492|LDB2|9079|LIM domain binding 2##AF064493|LDB2|9079|LIM domain binding 2##BC034019|LDB2|9079|LIM domain binding 2##AK226029|LDB2|9079|LIM domain binding 2##AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2	0.988232	CTCF.p2:-4:0.988
chr5	69586500	69586629	reg1020638.p1	6.933	+	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	-241132	+	NM_021967 NM_022968 BC021174 NM_001178087 NM_022978 AF073519 AF073518 BC035932 BC093880 BC171749 BC101970 BC103687 BC104738 BC143260 BC093882 BC143255	-265399	+	TSC_hg19_v1_chr5_+_68856071 AF078847 AK292361 BC065021 NM_001042490 BC064557 U21911 BC157894 BC171919 BC171860	-730458	+	TSC_hg19_v1_chr5_+_69696959 AK097091	110355	+	TSC_hg19_v1_chr5_-_69882021 AK097091	295466	-	NM_021967 NM_022968 BC021174 NM_001178087 NM_022978 AF073519 AF073518 BC035932 BC093880 BC171749 BC101970 BC103687 BC104738 BC143260 BC093882 BC143255	610019	+	NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric##NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF078847|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AK292361|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC065021|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##NM_001042490|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##BC064557|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##U21911|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##BC157894|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC171919|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##BC171860|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##AK097091|SMA4|11039|glucuronidase, beta pseudogene##AK097091|SMA4|11039|glucuronidase, beta pseudogene##NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	0.98704	CTCF.p2:-16:0.987
chr1	148247571	148247737	reg1020767.p1	6.932	+	NM_001164261 NM_001164262	-45119	-	TSC_hg19_v1_chr1_-_148176396 BC110832	-71258	-	AL117237 NM_015383 BC094705	-221800	-	NM_001170755 AK097180	310573	+	NM_173638 BC023087	313263	+	NM_001102663 AK290302 AY894566	329762	+	NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##AL117237|NBPF14|25832|neuroblastoma breakpoint family, member 14##NM_015383|NBPF14|25832|neuroblastoma breakpoint family, member 14##BC094705|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15##AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_173638|NBPF15|284565|neuroblastoma breakpoint family, member 15##BC023087|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15	0.02351	
chr1	43203067	43203219	reg1020671.p1	6.932	+	BC020164 TSC_hg19_v1_chr1_+_43162416	-40742	+	TSC_hg19_v1_chr1_+_43148644 BC013838	-54559	+	TSC_hg19_v1_chr1_+_43148189 DQ891609 DQ894802 AB385072	-54933	+	AF497644 BC030524 AK298992 AK096063 AK291197 NM_001123395 NM_001185117 NM_148960	2685	-	AK027680 AK297980 TSC_hg19_v1_chr1_-_43232700 BC091513 BC143961 BC143962 AK075418 BC004160 AK027648 AF097431 AF097432 BC108311 AK027697 AK300210 BC068461	29545	-	TSC_hg19_v1_chr1_-_43232730 NM_001146289 NM_001243246 NM_022356	29599	-	BC020164|YBX1|4904|Y box binding protein 1##BC013838|YBX1|4904|Y box binding protein 1##DQ891609|YBX1|4904|Y box binding protein 1##DQ894802|YBX1|4904|Y box binding protein 1##AF497644|CLDN19|149461|claudin 19##BC030524|CLDN19|149461|claudin 19##AK298992|CLDN19|149461|claudin 19##AK096063|CLDN19|149461|claudin 19##AK291197|CLDN19|149461|claudin 19##NM_001123395|CLDN19|149461|claudin 19##NM_001185117|CLDN19|149461|claudin 19##NM_148960|CLDN19|149461|claudin 19##AK027680|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK297980|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC091513|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC143961|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC143962|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK075418|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC004160|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK027648|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AF097431|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AF097432|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC108311|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK027697|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK300210|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC068461|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_001146289|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_001243246|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_022356|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1	0.736899	CTCF.p2:-27:0.714
chr1	61444766	61444892	reg1021511.p1	6.932	+	BC027878 AK124828 NM_152377	-905396	-	BC032594 TSC_hg19_v1_chr1_-_60392478	-1052360	-	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	-1052444	-	AK092769 TSC_hg19_v1_chr1_+_61542908	98027	+	TSC_hg19_v1_chr1_+_61542928 AK299289 NM_001145511	98107	+	TSC_hg19_v1_chr1_+_61547427 AK299579 NM_001145512	102631	+	BC027878|C1orf87|127795|chromosome 1 open reading frame 87##AK124828|C1orf87|127795|chromosome 1 open reading frame 87##NM_152377|C1orf87|127795|chromosome 1 open reading frame 87##BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK299289|NFIA|4774|nuclear factor I/A##NM_001145511|NFIA|4774|nuclear factor I/A##AK299579|NFIA|4774|nuclear factor I/A##NM_001145512|NFIA|4774|nuclear factor I/A	0.443953	CTCF.p2:-6:0.444
chr17	9862835	9862947	reg1021084.p2	6.932	+	AJ224876 NM_003644 AK293834 AK315162	-120	-	AB001838 BT009838 AB528320 DQ892822 DQ896068 BC001720 S62028 S45545 AB593156 NM_002903 S43855	-54302	-	TSC_hg19_v1_chr17_+_9745847 BC041176 BC019818	-117032	+	AB385324 BT006891 DQ892802 DQ895910 CU674584 AB209030 AK294829 TSC_hg19_v1_chr17_-_9923322	60372	-	TSC_hg19_v1_chr17_-_9923331 AK309722	60501	-	TSC_hg19_v1_chr17_-_9929603 AB007854 AK225165 AK299574 NM_001130831	66730	-	AJ224876|GAS7|8522|growth arrest-specific 7##NM_003644|GAS7|8522|growth arrest-specific 7##AK293834|GAS7|8522|growth arrest-specific 7##AK315162|GAS7|8522|growth arrest-specific 7##AB001838|RCVRN|5957|recoverin##BT009838|RCVRN|5957|recoverin##DQ892822|RCVRN|5957|recoverin##DQ896068|RCVRN|5957|recoverin##BC001720|RCVRN|5957|recoverin##S62028|RCVRN|5957|recoverin##S45545|RCVRN|5957|recoverin##AB593156|RCVRN|5957|recoverin##NM_002903|RCVRN|5957|recoverin##S43855|RCVRN|5957|recoverin##BC041176|GLP2R|9340|glucagon-like peptide 2 receptor##BC019818|GLP2R|9340|glucagon-like peptide 2 receptor##BT006891|GAS7|8522|growth arrest-specific 7##DQ892802|GAS7|8522|growth arrest-specific 7##DQ895910|GAS7|8522|growth arrest-specific 7##AB209030|GAS7|8522|growth arrest-specific 7##AK294829|GAS7|8522|growth arrest-specific 7##AK309722|GAS7|8522|growth arrest-specific 7##AB007854|GAS7|8522|growth arrest-specific 7##AK225165|GAS7|8522|growth arrest-specific 7##AK299574|GAS7|8522|growth arrest-specific 7##NM_001130831|GAS7|8522|growth arrest-specific 7	1.663632	CTCF.p2:-8:1.000	CTCF.p2:70:0.664
chr2	26744206	26744317	reg1020516.p1	6.932	+	AF107403 AF183186 AF183187 NM_004802 NM_194322 NM_194323	-43352	-	TSC_hg19_v1_chr2_+_26624787 AK057222 NM_145038 AK289953 AK307094	-119464	+	AK122995 AY358172 NM_153835	-174614	-	AF183185 NM_194248	37304	-	TSC_hg19_v1_chr2_+_26785463 NM_001105519	41207	+	BC140923 NM_001029881 BC127685 BC127684	119961	-	AF107403|OTOF|9381|otoferlin##AF183186|OTOF|9381|otoferlin##AF183187|OTOF|9381|otoferlin##NM_004802|OTOF|9381|otoferlin##NM_194322|OTOF|9381|otoferlin##NM_194323|OTOF|9381|otoferlin##AK057222|CCDC164|92749|coiled-coil domain containing 164##NM_145038|CCDC164|92749|coiled-coil domain containing 164##AK289953|CCDC164|92749|coiled-coil domain containing 164##AK307094|CCDC164|92749|coiled-coil domain containing 164##AK122995|GPR113|165082|G protein-coupled receptor 113##AY358172|GPR113|165082|G protein-coupled receptor 113##NM_153835|GPR113|165082|G protein-coupled receptor 113##AF183185|OTOF|9381|otoferlin##NM_194248|OTOF|9381|otoferlin##NM_001105519|C2orf70|339778|chromosome 2 open reading frame 70##BC140923|CIB4|130106|calcium and integrin binding family member 4##NM_001029881|CIB4|130106|calcium and integrin binding family member 4##BC127685|CIB4|130106|calcium and integrin binding family member 4##BC127684|CIB4|130106|calcium and integrin binding family member 4	0.0	
chr2	54892650	54892794	reg1021920.p1	6.932	+	TSC_hg19_v1_chr2_+_54785519 AF327441 NM_178313 BC137282 BC137283	-107157	+	TSC_hg19_v1_chr2_+_54684338 BC032061	-208355	+	TSC_hg19_v1_chr2_+_54683463 NM_003128 AB371586 AB209748	-209110	+	NM_001039753	59426	+	TSC_hg19_v1_chr2_-_55199899 BC131571	307186	-	AJ251385 AM392753 AM393122 AM393280 AM393537 BC139928 DQ778739 AF087901 BC014366 TSC_hg19_v1_chr2_-_55237387 BC007109 AF177332 AF132048 BC001035 AF077050 AF125103 NM_007008 AY102276	344650	-	AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_001039753|EML6|400954|echinoderm microtubule associated protein like 6##AJ251385|RTN4|57142|reticulon 4##AM392753|RTN4|57142|reticulon 4##AM393122|RTN4|57142|reticulon 4##AM393280|RTN4|57142|reticulon 4##AM393537|RTN4|57142|reticulon 4##BC139928|RTN4|57142|reticulon 4##DQ778739|RTN4|57142|reticulon 4##AF087901|RTN4|57142|reticulon 4##BC014366|RTN4|57142|reticulon 4##BC007109|RTN4|57142|reticulon 4##AF177332|RTN4|57142|reticulon 4##AF132048|RTN4|57142|reticulon 4##BC001035|RTN4|57142|reticulon 4##AF077050|RTN4|57142|reticulon 4##AF125103|RTN4|57142|reticulon 4##NM_007008|RTN4|57142|reticulon 4##AY102276|RTN4|57142|reticulon 4	0.938127	CTCF.p2:1:0.938
chr5	79220913	79221009	reg1021093.p2	6.932	+	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-235289	+	AK095818 TSC_hg19_v1_chr5_+_78908395	-312540	+	TSC_hg19_v1_chr5_+_78908296 BC026061	-312646	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	65997	-	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	110203	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	330924	-	BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##AK095818|PAPD4|167153|PAP associated domain containing 4##BC026061|PAPD4|167153|PAP associated domain containing 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5	0.078898	
chr6	105131049	105131182	reg1021768.p1	6.932	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	-3284210	+	BC037954 TSC_hg19_v1_chr6_+_101846686	-3284438	+	HM149340 TSC_hg19_v1_chr6_+_101841583	-3289609	+	TSC_hg19_v1_chr6_-_105307736 AK291760	176610	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	176647	-	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	176673	-	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	0.999748	CTCF.p2:-6:1.000
chr6	56157491	56157632	reg1019747.p1	6.932	+	TSC_hg19_v1_chr6_-_56112350 BC045597 AF414088 AL136624 AK313398 NM_030820	-45200	-	TSC_hg19_v1_chr6_-_56112233 BC126108 BC143862 BC143863 BC143864 BC143865 AK126586	-45325	-	AK291559 TSC_hg19_v1_chr6_-_55740389	-417172	-	AF330693 TSC_hg19_v1_chr6_-_56258945	101363	-	BC038763 TSC_hg19_v1_chr6_-_56407722	250147	-	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	350078	-	BC045597|COL21A1|81578|collagen, type XXI, alpha 1##AF414088|COL21A1|81578|collagen, type XXI, alpha 1##AL136624|COL21A1|81578|collagen, type XXI, alpha 1##AK313398|COL21A1|81578|collagen, type XXI, alpha 1##NM_030820|COL21A1|81578|collagen, type XXI, alpha 1##BC126108|COL21A1|81578|collagen, type XXI, alpha 1##BC143862|COL21A1|81578|collagen, type XXI, alpha 1##BC143863|COL21A1|81578|collagen, type XXI, alpha 1##BC143864|COL21A1|81578|collagen, type XXI, alpha 1##BC143865|COL21A1|81578|collagen, type XXI, alpha 1##AK126586|COL21A1|81578|collagen, type XXI, alpha 1##AK291559|BMP5|653|bone morphogenetic protein 5##AF330693|COL21A1|81578|collagen, type XXI, alpha 1##AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin	0.838456	CTCF.p2:26:0.838
chr17	73841438	73841570	reg1020019.p2	6.931	+	TSC_hg19_v1_chr17_-_73840622 BC067084 NM_199242 AK300316	-720	-	TSC_hg19_v1_chr17_-_73840495 AK024474	-993	-	EU831417 EU831510 TSC_hg19_v1_chr17_-_73840455 AK301529 AJ578444	-1055	-	AB464357 CU679759 DQ891052 DQ894231 TSC_hg19_v1_chr17_-_73851417 AK293214 AF087866 BC007452 AK057881 BC010616 AK294082 AK294155 AK300875 NM_012478	9934	-	TSC_hg19_v1_chr17_-_73874063 BC017299	32559	-	TSC_hg19_v1_chr17_-_73874663 AY026763 NM_033452	33147	-	BC067084|UNC13D|201294|unc-13 homolog D (C. elegans)##NM_199242|UNC13D|201294|unc-13 homolog D (C. elegans)##AK300316|UNC13D|201294|unc-13 homolog D (C. elegans)##AK024474|UNC13D|201294|unc-13 homolog D (C. elegans)##EU831417|UNC13D|201294|unc-13 homolog D (C. elegans)##EU831510|UNC13D|201294|unc-13 homolog D (C. elegans)##AK301529|UNC13D|201294|unc-13 homolog D (C. elegans)##AJ578444|UNC13D|201294|unc-13 homolog D (C. elegans)##DQ891052|WBP2|23558|WW domain binding protein 2##DQ894231|WBP2|23558|WW domain binding protein 2##AK293214|WBP2|23558|WW domain binding protein 2##AF087866|WBP2|23558|WW domain binding protein 2##BC007452|WBP2|23558|WW domain binding protein 2##AK057881|WBP2|23558|WW domain binding protein 2##BC010616|WBP2|23558|WW domain binding protein 2##AK294082|WBP2|23558|WW domain binding protein 2##AK294155|WBP2|23558|WW domain binding protein 2##AK300875|WBP2|23558|WW domain binding protein 2##NM_012478|WBP2|23558|WW domain binding protein 2##BC017299|TRIM47|91107|tripartite motif containing 47##AY026763|TRIM47|91107|tripartite motif containing 47##NM_033452|TRIM47|91107|tripartite motif containing 47	0.047049	
chr9	15552203	15552306	reg1019075.p1	6.931	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-41294	-	AF098483 AF098482 NM_021144	-42007	-	TSC_hg19_v1_chr9_+_15422877 AB527501 EU446705 BC014985	-129342	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	767	+	TSC_hg19_v1_chr9_-_16727889 AY438376	1175643	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	1318413	-	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2	0.102414	
chr14	22552788	22552909	reg1018932.p1	6.930	+	AB463964 NM_001001912 AY726598	-419526	+	NM_001005466 AB529274 BC137371 BC137382	-449802	-	AB528817 NM_001005465	-513974	-	X58763 TSC_hg19_v1_chr14_+_22989364	436501	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	505238	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	505286	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.998528	CTCF.p2:32:0.999
chr17	33940090	33940212	reg1022053.p1	6.930	+	TSC_hg19_v1_chr17_+_33914357 BC006201 CR749392 AK292531	-25687	+	TSC_hg19_v1_chr17_+_33914353 AK301522 AY341427 AK289528	-25814	+	TSC_hg19_v1_chr17_+_33914281 NM_001030006 NM_001282 M34175 AK295667	-25861	+	AK122652 NM_033315 TSC_hg19_v1_chr17_+_34058691 BC041133	118566	+	AF508784 AF508785 NM_139285	139745	-	NM_145272 BC021727 AB528807 AY557347	147786	+	BC006201|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##CR749392|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AK292531|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AK301522|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AY341427|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AK289528|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##NM_001030006|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##NM_001282|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##M34175|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AK295667|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AK122652|RASL10B|91608|RAS-like, family 10, member B##NM_033315|RASL10B|91608|RAS-like, family 10, member B##BC041133|RASL10B|91608|RAS-like, family 10, member B##AF508784|GAS2L2|246176|growth arrest-specific 2 like 2##AF508785|GAS2L2|246176|growth arrest-specific 2 like 2##NM_139285|GAS2L2|246176|growth arrest-specific 2 like 2##NM_145272|C17orf50|146853|chromosome 17 open reading frame 50##BC021727|C17orf50|146853|chromosome 17 open reading frame 50##AY557347|C17orf50|146853|chromosome 17 open reading frame 50	0.702994	CTCF.p2:-5:0.703
chr3	85625382	85625484	reg1020133.p2	6.930	+	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	-617304	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-3590131	+	TSC_hg19_v1_chr3_-_81810971 NM_000158	-3814491	-	AF538973 NM_153184	150198	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	1414818	-	BC094780 TSC_hg19_v1_chr3_-_87040272	1414837	-	AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##NM_000158|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)	0.999397	CTCF.p2:-6:0.999
chr8	81402246	81402389	reg1018735.p1	6.929	+	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-3833	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-318547	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-409288	-	AK131274 NM_001033723	384698	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	621997	-	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	790456	+	AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	0.074715	
chr11	88218088	88218207	reg1020895.p1	6.928	+	TSC_hg19_v1_chr11_-_88070905 BX537913 NM_001114173 NM_001814 NM_148170	-147216	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	-147245	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	-147280	-	AY608336 D28538 D28539 NM_001143831	562992	-	AK291362 NM_000842	578668	-	NM_000372 BC027179 M74314 Y00819 U01873 J03581	692933	+	BX537913|CTSC|1075|cathepsin C##NM_001114173|CTSC|1075|cathepsin C##NM_001814|CTSC|1075|cathepsin C##NM_148170|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AY608336|GRM5|2915|glutamate receptor, metabotropic 5##D28538|GRM5|2915|glutamate receptor, metabotropic 5##D28539|GRM5|2915|glutamate receptor, metabotropic 5##NM_001143831|GRM5|2915|glutamate receptor, metabotropic 5##AK291362|GRM5|2915|glutamate receptor, metabotropic 5##NM_000842|GRM5|2915|glutamate receptor, metabotropic 5##NM_000372|TYR|7299|tyrosinase (oculocutaneous albinism IA)##BC027179|TYR|7299|tyrosinase (oculocutaneous albinism IA)##M74314|TYR|7299|tyrosinase (oculocutaneous albinism IA)##Y00819|TYR|7299|tyrosinase (oculocutaneous albinism IA)##U01873|TYR|7299|tyrosinase (oculocutaneous albinism IA)##J03581|TYR|7299|tyrosinase (oculocutaneous albinism IA)	0.966564	CTCF.p2:-7:0.967
chr16	54991399	54991486	reg1018992.p1	6.928	+	AY335945 BC131510 NM_001252197 NM_005853	-26332	+	AF275804 TSC_hg19_v1_chr16_-_54962719	-28727	-	TSC_hg19_v1_chr16_-_54320368 AY335943 NM_024336	-671049	-	AY335937 NM_024335	367028	+	TSC_hg19_v1_chr16_+_55513109 NM_004530 X58968 AK312711 BC002576 DQ891952 DQ895138 AB385158 CU678050 J03210	521678	+	AK310314 NM_001127891	524028	+	AY335945|IRX5|10265|iroquois homeobox 5##BC131510|IRX5|10265|iroquois homeobox 5##NM_001252197|IRX5|10265|iroquois homeobox 5##NM_005853|IRX5|10265|iroquois homeobox 5##AF275804|CRNDE|643911|colorectal neoplasia differentially expressed (non-protein coding)##AY335943|IRX3|79191|iroquois homeobox 3##NM_024336|IRX3|79191|iroquois homeobox 3##AY335937|IRX6|79190|iroquois homeobox 6##NM_024335|IRX6|79190|iroquois homeobox 6##NM_004530|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##X58968|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##AK312711|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##BC002576|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##DQ891952|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##DQ895138|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##J03210|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##AK310314|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##NM_001127891|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	0.990177	CTCF.p2:-1:0.990
chr19	7896504	7896635	reg1022059.p1	6.928	+	TSC_hg19_v1_chr19_+_7895113 NM_145245 BC014111	-1393	+	NM_001144904 NM_001144905 NM_001144906 NM_001144907 NM_001144908 NM_001144909 NM_001144910 NM_001144911 NM_014257 AK292278 BC038851 AF290887 AK304499 AK314704 AB015629 AF245219 AK298084 AK023750 BC110614 AY343913 DQ893779 AY042234 AY042235 AY042236 AY042237 AY042238 AY042239 AY042240	-68476	+	AY042221 AY042222 AY042223 AY042224 AY042225 AY042226 AY042227 AY042228 AY042229 AY042230 AY042231 AY042232 AY042233 AB527563 BC110615 AF290886 AK293089 TSC_hg19_v1_chr19_-_7812421 M98457 AK304190 AK313585 NM_001144893 NM_001144894 NM_001144895 NM_001144896 NM_001144897 NM_001144899 NM_021155	-84140	-	NM_001159944 AB449874	14837	+	AL442075 TSC_hg19_v1_chr19_-_7934829	38248	-	NM_001190467 TSC_hg19_v1_chr19_-_7939337	42771	-	NM_145245|EVI5L|115704|ecotropic viral integration site 5-like##BC014111|EVI5L|115704|ecotropic viral integration site 5-like##NM_001144904|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144905|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144906|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144907|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144908|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144909|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144910|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144911|CLEC4M|10332|C-type lectin domain family 4, member M##NM_014257|CLEC4M|10332|C-type lectin domain family 4, member M##AK292278|CLEC4M|10332|C-type lectin domain family 4, member M##BC038851|CLEC4M|10332|C-type lectin domain family 4, member M##AF290887|CLEC4M|10332|C-type lectin domain family 4, member M##AK304499|CLEC4M|10332|C-type lectin domain family 4, member M##AK314704|CLEC4M|10332|C-type lectin domain family 4, member M##AB015629|CLEC4M|10332|C-type lectin domain family 4, member M##AF245219|CLEC4M|10332|C-type lectin domain family 4, member M##AK298084|CLEC4M|10332|C-type lectin domain family 4, member M##AK023750|CLEC4M|10332|C-type lectin domain family 4, member M##BC110614|CLEC4M|10332|C-type lectin domain family 4, member M##AY343913|CLEC4M|10332|C-type lectin domain family 4, member M##DQ893779|CLEC4M|10332|C-type lectin domain family 4, member M##AY042234|CLEC4M|10332|C-type lectin domain family 4, member M##AY042235|CLEC4M|10332|C-type lectin domain family 4, member M##AY042236|CLEC4M|10332|C-type lectin domain family 4, member M##AY042237|CLEC4M|10332|C-type lectin domain family 4, member M##AY042238|CLEC4M|10332|C-type lectin domain family 4, member M##AY042239|CLEC4M|10332|C-type lectin domain family 4, member M##AY042240|CLEC4M|10332|C-type lectin domain family 4, member M##AY042221|CD209|30835|CD209 molecule##AY042222|CD209|30835|CD209 molecule##AY042223|CD209|30835|CD209 molecule##AY042224|CD209|30835|CD209 molecule##AY042225|CD209|30835|CD209 molecule##AY042226|CD209|30835|CD209 molecule##AY042227|CD209|30835|CD209 molecule##AY042228|CD209|30835|CD209 molecule##AY042229|CD209|30835|CD209 molecule##AY042230|CD209|30835|CD209 molecule##AY042231|CD209|30835|CD209 molecule##AY042232|CD209|30835|CD209 molecule##AY042233|CD209|30835|CD209 molecule##BC110615|CD209|30835|CD209 molecule##AF290886|CD209|30835|CD209 molecule##AK293089|CD209|30835|CD209 molecule##M98457|CD209|30835|CD209 molecule##AK304190|CD209|30835|CD209 molecule##AK313585|CD209|30835|CD209 molecule##NM_001144893|CD209|30835|CD209 molecule##NM_001144894|CD209|30835|CD209 molecule##NM_001144895|CD209|30835|CD209 molecule##NM_001144896|CD209|30835|CD209 molecule##NM_001144897|CD209|30835|CD209 molecule##NM_001144899|CD209|30835|CD209 molecule##NM_021155|CD209|30835|CD209 molecule##NM_001159944|EVI5L|115704|ecotropic viral integration site 5-like##AB449874|EVI5L|115704|ecotropic viral integration site 5-like##AL442075|FLJ22184|80164|putative uncharacterized protein FLJ22184##NM_001190467|FLJ22184|80164|putative uncharacterized protein FLJ22184	0.902985	CTCF.p2:17:0.903
chr2	167396016	167396121	reg1019083.p1	6.928	+	TSC_hg19_v1_chr2_-_167350721 BC062699	-45370	-	AK308450 TSC_hg19_v1_chr2_-_167350647	-45452	-	BC141864 M91556 NM_002976	-52590	-	EF119718 EF119719 EF119720 EF119721 EF119722 NM_001079810 NM_001199143 NM_152381 AK097519	348928	+	EF119711 EF119717 NM_001199144 NM_001199145	647724	+	NM_020981	1279113	+	BC062699|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##AK308450|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##BC141864|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##M91556|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##NM_002976|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##EF119718|XIRP2|129446|xin actin-binding repeat containing 2##EF119719|XIRP2|129446|xin actin-binding repeat containing 2##EF119720|XIRP2|129446|xin actin-binding repeat containing 2##EF119721|XIRP2|129446|xin actin-binding repeat containing 2##EF119722|XIRP2|129446|xin actin-binding repeat containing 2##NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199143|XIRP2|129446|xin actin-binding repeat containing 2##NM_152381|XIRP2|129446|xin actin-binding repeat containing 2##AK097519|XIRP2|129446|xin actin-binding repeat containing 2##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	0.987698	CTCF.p2:-6:0.988
chr3	49878712	49878814	reg1021296.p2	6.928	+	TSC_hg19_v1_chr3_-_49851387 NM_003335 L13852	-27374	-	CU675375 BT007026 DQ893307 DQ893707 TSC_hg19_v1_chr3_-_49851326 BC006378	-27492	-	BC012170 NM_203370 TSC_hg19_v1_chr3_+_49840695	-38063	+	AB451320 AB451449 AB590668 CU674148 EF036504 TSC_hg19_v1_chr3_-_49894001 AK225873 BC000310 BC019283 AK292172 NM_005879 U77845 AK295780	15182	-	TSC_hg19_v1_chr3_-_49907340 BC019256 BC000497 BC001921 BC005828 BC017363 AK297437 BX647074 AK299953 AL136697 AK074899 AK297258 AK295588 AK075294 AK074856 NM_024046 AK315525	28582	-	TSC_hg19_v1_chr3_-_49941304 NM_001244937 NM_002447	62539	-	NM_003335|UBA7|7318|ubiquitin-like modifier activating enzyme 7##L13852|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BT007026|UBA7|7318|ubiquitin-like modifier activating enzyme 7##DQ893307|UBA7|7318|ubiquitin-like modifier activating enzyme 7##DQ893707|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BC006378|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BC012170|FAM212A|389119|family with sequence similarity 212, member A##NM_203370|FAM212A|389119|family with sequence similarity 212, member A##AB451320|TRAIP|10293|TRAF interacting protein##AB451449|TRAIP|10293|TRAF interacting protein##EF036504|TRAIP|10293|TRAF interacting protein##AK225873|TRAIP|10293|TRAF interacting protein##BC000310|TRAIP|10293|TRAF interacting protein##BC019283|TRAIP|10293|TRAF interacting protein##AK292172|TRAIP|10293|TRAF interacting protein##NM_005879|TRAIP|10293|TRAF interacting protein##U77845|TRAIP|10293|TRAF interacting protein##AK295780|TRAIP|10293|TRAF interacting protein##BC019256|CAMKV|79012|CaM kinase-like vesicle-associated##BC000497|CAMKV|79012|CaM kinase-like vesicle-associated##BC001921|CAMKV|79012|CaM kinase-like vesicle-associated##BC005828|CAMKV|79012|CaM kinase-like vesicle-associated##BC017363|CAMKV|79012|CaM kinase-like vesicle-associated##AK297437|CAMKV|79012|CaM kinase-like vesicle-associated##BX647074|CAMKV|79012|CaM kinase-like vesicle-associated##AK299953|CAMKV|79012|CaM kinase-like vesicle-associated##AL136697|CAMKV|79012|CaM kinase-like vesicle-associated##AK074899|CAMKV|79012|CaM kinase-like vesicle-associated##AK297258|CAMKV|79012|CaM kinase-like vesicle-associated##AK295588|CAMKV|79012|CaM kinase-like vesicle-associated##AK075294|CAMKV|79012|CaM kinase-like vesicle-associated##AK074856|CAMKV|79012|CaM kinase-like vesicle-associated##NM_024046|CAMKV|79012|CaM kinase-like vesicle-associated##AK315525|CAMKV|79012|CaM kinase-like vesicle-associated##NM_001244937|MST1R|4486|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)##NM_002447|MST1R|4486|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)	0.085856	
chr5	114234443	114234582	reg1019668.p2	6.928	+	BC015371 NM_170775 BC040722	-465263	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	-536051	+	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	-536463	+	TSC_hg19_v1_chr5_-_114505606 AK316422 AK296389	271092	-	AB196558 AJ272269 BC130334 AK125426 BC045164 BC046096 NM_001017397 NM_001017398 NM_018700	281475	-	AY780790 AB590094 TSC_hg19_v1_chr5_-_114598563 NM_005023	364054	-	BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK316422|TRIM36|55521|tripartite motif containing 36##AK296389|TRIM36|55521|tripartite motif containing 36##AB196558|TRIM36|55521|tripartite motif containing 36##AJ272269|TRIM36|55521|tripartite motif containing 36##BC130334|TRIM36|55521|tripartite motif containing 36##AK125426|TRIM36|55521|tripartite motif containing 36##BC045164|TRIM36|55521|tripartite motif containing 36##BC046096|TRIM36|55521|tripartite motif containing 36##NM_001017397|TRIM36|55521|tripartite motif containing 36##NM_001017398|TRIM36|55521|tripartite motif containing 36##NM_018700|TRIM36|55521|tripartite motif containing 36##AY780790|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##NM_005023|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit	0.015808	
chr5	72466488	72466612	reg1021428.p1	6.928	+	TSC_hg19_v1_chr5_+_72416401 NM_001161342 NM_173490 BC018083	-50114	+	TSC_hg19_v1_chr5_+_72251897 AK291782 BC006004 AK295141 BC014311 AL831971 AM393291 AM393840 CU676963	-214649	+	TSC_hg19_v1_chr5_+_72251873 AK056770	-214679	+	AK315460 NM_153217 AK055830	2481	+	U13222 TSC_hg19_v1_chr5_-_72743884	277309	-	NM_004472 U59832 TSC_hg19_v1_chr5_-_72744463	277859	-	NM_001161342|TMEM171|134285|transmembrane protein 171##NM_173490|TMEM171|134285|transmembrane protein 171##BC018083|TMEM171|134285|transmembrane protein 171##AK291782|FCHO2|115548|FCH domain only 2##BC006004|FCHO2|115548|FCH domain only 2##AK295141|FCHO2|115548|FCH domain only 2##BC014311|FCHO2|115548|FCH domain only 2##AL831971|FCHO2|115548|FCH domain only 2##AM393291|FCHO2|115548|FCH domain only 2##AM393840|FCHO2|115548|FCH domain only 2##AK315460|TMEM174|134288|transmembrane protein 174##NM_153217|TMEM174|134288|transmembrane protein 174##AK055830|TMEM174|134288|transmembrane protein 174##U13222|FOXD1|2297|forkhead box D1##NM_004472|FOXD1|2297|forkhead box D1##U59832|FOXD1|2297|forkhead box D1	0.903169	CTCF.p2:10:0.903
chr7	64912141	64912257	reg1020809.p2	6.928	+	TSC_hg19_v1_chr7_+_64838793 AK091618 AX747097 BC036439 M61872	-73392	+	TSC_hg19_v1_chr7_+_64838761 BX647875 NM_007139 NM_152626 BC040594	-73449	+	TSC_hg19_v1_chr7_+_64601445 AK057766	-310679	+	TSC_hg19_v1_chr7_-_65215912 BX647963	303719	-	TSC_hg19_v1_chr7_+_65216060 BC052238 BC073761 BC122874 BC119782	303884	+	TSC_hg19_v1_chr7_-_65235746 BC066990	323546	-	AK091618|ZNF92|168374|zinc finger protein 92##BC036439|ZNF92|168374|zinc finger protein 92##M61872|ZNF92|168374|zinc finger protein 92##BX647875|ZNF92|168374|zinc finger protein 92##NM_007139|ZNF92|168374|zinc finger protein 92##NM_152626|ZNF92|168374|zinc finger protein 92##BC040594|ZNF92|168374|zinc finger protein 92##AK057766|INTS4L1|285905|integrator complex subunit 4-like 1##BC052238|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC073761|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC122874|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC119782|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC066990|LOC441242|441242|uncharacterized LOC441242	0.830069	CTCF.p2:21:0.830
chrX	130839045	130839197	reg1017655.p3	6.928	+	BC137050 AB529233 NM_001004486	-161123	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-415709	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-415859	-	TSC_hg19_v1_chrX_-_130964633 AK097911	125530	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	318200	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	318519	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.059839	
chr10	135121340	135121459	reg1019622.p1	6.927	+	BC115404 D26579 BC064500 AX810718 AK310662 TSC_hg19_v1_chr10_-_135090368 AK301147 AK312834 NM_001109 NM_001164489 NM_001164490	-31034	-	AF068006 BC108915 BC108916 NM_014468 AB464343 EU446701	-69988	+	AB011076 AY606112 NM_003577	-77623	+	BC005011 BC093770 BC111957 BC143247 AF042379 TSC_hg19_v1_chr10_-_135122377 BC052368 AK299564 AK297251 AK314520	960	-	TSC_hg19_v1_chr10_+_135122444 BC015139 BC019897 NM_145806 AK091711 AX747142 AK292380	1010	+	AK223586 NM_006659	1197	-	BC115404|ADAM8|101|ADAM metallopeptidase domain 8##D26579|ADAM8|101|ADAM metallopeptidase domain 8##BC064500|ADAM8|101|ADAM metallopeptidase domain 8##AK310662|ADAM8|101|ADAM metallopeptidase domain 8##AK301147|ADAM8|101|ADAM metallopeptidase domain 8##AK312834|ADAM8|101|ADAM metallopeptidase domain 8##NM_001109|ADAM8|101|ADAM metallopeptidase domain 8##NM_001164489|ADAM8|101|ADAM metallopeptidase domain 8##NM_001164490|ADAM8|101|ADAM metallopeptidase domain 8##AF068006|VENTX|27287|VENT homeobox##BC108915|VENTX|27287|VENT homeobox##BC108916|VENTX|27287|VENT homeobox##NM_014468|VENTX|27287|VENT homeobox##EU446701|VENTX|27287|VENT homeobox##AB011076|UTF1|8433|undifferentiated embryonic cell transcription factor 1##AY606112|UTF1|8433|undifferentiated embryonic cell transcription factor 1##NM_003577|UTF1|8433|undifferentiated embryonic cell transcription factor 1##BC005011|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC093770|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC111957|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC143247|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AF042379|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC052368|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AK299564|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AK297251|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AK314520|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC015139|ZNF511|118472|zinc finger protein 511##BC019897|ZNF511|118472|zinc finger protein 511##NM_145806|ZNF511|118472|zinc finger protein 511##AK091711|ZNF511|118472|zinc finger protein 511##AK292380|ZNF511|118472|zinc finger protein 511##AK223586|TUBGCP2|10844|tubulin, gamma complex associated protein 2##NM_006659|TUBGCP2|10844|tubulin, gamma complex associated protein 2	0.998789	CTCF.p2:-2:0.999
chr10	88444123	88444234	reg1021158.p2	6.927	+	AK304760 TSC_hg19_v1_chr10_+_88428267 AK300692 AK297871 NM_001080116 AJ133766 BC010929 NM_001080114 NM_001080115 NM_001171611 NM_007078 AB014513 AF276807 AF276808 AF276809 AJ133767 AJ133768	-15823	+	TSC_hg19_v1_chr10_+_88428170 NM_001171610	-15992	+	TSC_hg19_v1_chr10_+_88426539 AK294696	-17633	+	TSC_hg19_v1_chr10_+_88516526 NM_004329 BC028383 AK291764 Z22535	72309	+	TSC_hg19_v1_chr10_-_88717330 BC072456 AK304727 AK023527 AK293822 BC094744 BC064415 AK308401 NM_024756	273193	-	NM_003087 AK223367 AK311652 BC014098 AK312141 AF017256 AF411524 EU019993 AF010126 DQ892334 DQ892505 DQ895719 EU176715 AB464279 CR541788 CR541790	274192	+	AK304760|LDB3|11155|LIM domain binding 3##AK300692|LDB3|11155|LIM domain binding 3##AK297871|LDB3|11155|LIM domain binding 3##NM_001080116|LDB3|11155|LIM domain binding 3##AJ133766|LDB3|11155|LIM domain binding 3##BC010929|LDB3|11155|LIM domain binding 3##NM_001080114|LDB3|11155|LIM domain binding 3##NM_001080115|LDB3|11155|LIM domain binding 3##NM_001171611|LDB3|11155|LIM domain binding 3##NM_007078|LDB3|11155|LIM domain binding 3##AB014513|LDB3|11155|LIM domain binding 3##AF276807|LDB3|11155|LIM domain binding 3##AF276808|LDB3|11155|LIM domain binding 3##AF276809|LDB3|11155|LIM domain binding 3##AJ133767|LDB3|11155|LIM domain binding 3##AJ133768|LDB3|11155|LIM domain binding 3##NM_001171610|LDB3|11155|LIM domain binding 3##AK294696|LDB3|11155|LIM domain binding 3##NM_004329|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC028383|BMPR1A|657|bone morphogenetic protein receptor, type IA##AK291764|BMPR1A|657|bone morphogenetic protein receptor, type IA##Z22535|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC072456|MMRN2|79812|multimerin 2##AK304727|MMRN2|79812|multimerin 2##AK023527|MMRN2|79812|multimerin 2##AK293822|MMRN2|79812|multimerin 2##BC094744|MMRN2|79812|multimerin 2##BC064415|MMRN2|79812|multimerin 2##AK308401|MMRN2|79812|multimerin 2##NM_024756|MMRN2|79812|multimerin 2##NM_003087|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK223367|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##BC014098|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK312141|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF017256|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF411524|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU019993|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF010126|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892334|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892505|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ895719|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU176715|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541788|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541790|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)	0.987297	CTCF.p2:8:0.973
chr19	29958851	29958964	reg1022396.p1	6.927	+	TSC_hg19_v1_chr19_-_29704107 NM_006003	-254786	-	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	-254847	-	TSC_hg19_v1_chr19_+_28284946 AK095009	-1673979	+	NM_001146339	58583	+	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	138282	+	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	197442	+	NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B##NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1	0.920696	CTCF.p2:9:0.921
chr3	190854276	190854395	reg1020184.p1	6.927	+	NM_001146686	-273871	-	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	-622458	+	CU687168 BC071780 AY358607 NM_207316	-686705	-	AY398681 AY573933 BC128106 BC128107 NM_198184	75986	+	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	192831	+	AK090630 AX746546 NM_198152	193989	-	NM_001146686|GMNC|647309|geminin coiled-coil domain containing##NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207##AY398681|OSTN|344901|osteocrin##AY573933|OSTN|344901|osteocrin##BC128106|OSTN|344901|osteocrin##BC128107|OSTN|344901|osteocrin##NM_198184|OSTN|344901|osteocrin##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing	0.865189	CTCF.p2:-2:0.865
chr4	143946583	143946712	reg1021703.p1	6.927	+	NM_001101669 NM_003866	-179044	-	AK290619 NM_000585 NM_172175 BC018149 U14407	-1388881	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-1804561	+	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	159417	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	159478	+	NM_002039 NM_207123 AK289767 BC064848	311368	+	NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38##NM_002039|GAB1|2549|GRB2-associated binding protein 1##NM_207123|GAB1|2549|GRB2-associated binding protein 1##AK289767|GAB1|2549|GRB2-associated binding protein 1##BC064848|GAB1|2549|GRB2-associated binding protein 1	0.203848	CTCF.p2:21:0.204
chr12	82752514	82752694	reg1016474.p2	6.926	+	NM_032230 TSC_hg19_v1_chr12_+_82752307 AK310231 AK026442 BC029120 CU688600	-295	+	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	-428	-	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	-599495	-	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	328096	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	328313	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	328657	+	NM_032230|C12orf26|84190|chromosome 12 open reading frame 26##AK310231|C12orf26|84190|chromosome 12 open reading frame 26##AK026442|C12orf26|84190|chromosome 12 open reading frame 26##BC029120|C12orf26|84190|chromosome 12 open reading frame 26##BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59##AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2	1.723082	CTCF.p2:-23:0.911	CTCF.p2:70:0.812
chr11	118901700	118901824	reg1020860.p2	6.925	+	BC014663 AB209026 TSC_hg19_v1_chr11_-_118901588 AK294993 AK298395 AK300646 AK289642 AK312628 NM_001164277 NM_001164278 NM_001164279 NM_001467	-168	-	AF110819 AF110820 AF110821 AF110822 CR456733 CU677381 AY423732 TSC_hg19_v1_chr11_-_118900155 Y15409 BC064563 BC002400 BC003589 NM_001164280	-1585	-	TSC_hg19_v1_chr11_+_118889482 AF161520 AK025623 AK290520 AK293914 AK293977 AK297422 BC010866	-12308	+	TSC_hg19_v1_chr11_-_118927762 BC017726 AK297260	26007	-	TSC_hg19_v1_chr11_-_118927824 BC072436 U65785	26061	-	TSC_hg19_v1_chr11_-_118927846 AK222756 AK294905 DQ350134 DQ372932 AK301514 AK314178 AK304264	26079	-	BC014663|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AB209026|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AK294993|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AK298395|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AK300646|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AK289642|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AK312628|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##NM_001164277|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##NM_001164278|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##NM_001164279|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##NM_001467|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AF110819|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AF110820|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AF110821|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AF110822|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##CR456733|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AY423732|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##Y15409|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##BC064563|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##BC002400|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##BC003589|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##NM_001164280|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AF161520|TRAPPC4|51399|trafficking protein particle complex 4##AK025623|TRAPPC4|51399|trafficking protein particle complex 4##AK290520|TRAPPC4|51399|trafficking protein particle complex 4##AK293914|TRAPPC4|51399|trafficking protein particle complex 4##AK293977|TRAPPC4|51399|trafficking protein particle complex 4##AK297422|TRAPPC4|51399|trafficking protein particle complex 4##BC010866|TRAPPC4|51399|trafficking protein particle complex 4##BC017726|HYOU1|10525|hypoxia up-regulated 1##AK297260|HYOU1|10525|hypoxia up-regulated 1##BC072436|HYOU1|10525|hypoxia up-regulated 1##U65785|HYOU1|10525|hypoxia up-regulated 1##AK222756|HYOU1|10525|hypoxia up-regulated 1##AK294905|HYOU1|10525|hypoxia up-regulated 1##DQ350134|HYOU1|10525|hypoxia up-regulated 1##DQ372932|HYOU1|10525|hypoxia up-regulated 1##AK301514|HYOU1|10525|hypoxia up-regulated 1##AK314178|HYOU1|10525|hypoxia up-regulated 1##AK304264|HYOU1|10525|hypoxia up-regulated 1	0.028584	
chr14	24630314	24630435	reg1019180.p1	6.925	+	TSC_hg19_v1_chr14_+_24616708 AK000973 AK225832 BC012077	-13652	+	NM_017999 TSC_hg19_v1_chr14_+_24616706 AK291247	-13692	+	BX161498 TSC_hg19_v1_chr14_-_24616476	-13892	-	NM_006084 TSC_hg19_v1_chr14_+_24630473 AK308347 AK295467 M87503	102	+	TSC_hg19_v1_chr14_+_24641084 AK291191	10718	+	TSC_hg19_v1_chr14_+_24641288 AK001435 NM_001048205 NM_005132 BC010887 AL832973	10899	+	AK000973|RNF31|55072|ring finger protein 31##AK225832|RNF31|55072|ring finger protein 31##BC012077|RNF31|55072|ring finger protein 31##NM_017999|RNF31|55072|ring finger protein 31##AK291247|RNF31|55072|ring finger protein 31##BX161498|PSME2|5721|proteasome (prosome, macropain) activator subunit 2 (PA28 beta)##NM_006084|IRF9|10379|interferon regulatory factor 9##AK308347|IRF9|10379|interferon regulatory factor 9##AK295467|IRF9|10379|interferon regulatory factor 9##M87503|IRF9|10379|interferon regulatory factor 9##AK291191|REC8|9985|REC8 homolog (yeast)##AK001435|REC8|9985|REC8 homolog (yeast)##NM_001048205|REC8|9985|REC8 homolog (yeast)##NM_005132|REC8|9985|REC8 homolog (yeast)##BC010887|REC8|9985|REC8 homolog (yeast)##AL832973|REC8|9985|REC8 homolog (yeast)	0.999883	CTCF.p2:-1:1.000
chr14	60385585	60385738	reg1021803.p1	6.925	+	AB587373 TSC_hg19_v1_chr14_-_60337495 BC111694 L10333 BC090862 BC068510 NM_021136	-48208	-	AK290534 NM_206852 TSC_hg19_v1_chr14_-_60097533	-288128	-	TSC_hg19_v1_chr14_-_60097342 BC000314 BC003003 AK297492	-288317	-	NM_022495 TSC_hg19_v1_chr14_+_60558640 AK095489	173166	+	AY359031 TSC_hg19_v1_chr14_-_60632031 BC000637	246371	-	TSC_hg19_v1_chr14_-_60632103 BC007337 AF151844 AK313285 AL117420 NM_016029	246473	-	BC111694|RTN1|6252|reticulon 1##L10333|RTN1|6252|reticulon 1##BC090862|RTN1|6252|reticulon 1##BC068510|RTN1|6252|reticulon 1##NM_021136|RTN1|6252|reticulon 1##AK290534|RTN1|6252|reticulon 1##NM_206852|RTN1|6252|reticulon 1##BC000314|RTN1|6252|reticulon 1##BC003003|RTN1|6252|reticulon 1##AK297492|RTN1|6252|reticulon 1##NM_022495|C14orf135|64430|chromosome 14 open reading frame 135##AK095489|C14orf135|64430|chromosome 14 open reading frame 135##AY359031|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC000637|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC007337|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AF151844|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AK313285|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AL117420|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_016029|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7	0.093131	
chr2	105466107	105466251	reg1022224.p1	6.925	+	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	-2087597	+	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	-2112797	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	-2112846	-	TSC_hg19_v1_chr2_-_105467912 AK096498	1737	-	TSC_hg19_v1_chr2_+_105471877 NM_006236	5719	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	188335	+	CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182##AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##NM_006236|POU3F3|5455|POU class 3 homeobox 3##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9	0.971177	CTCF.p2:10:0.971
chr5	78428927	78429107	reg1008819.p1	6.925	+	NM_001713 AK298308 AK303780 AK315224 BC012616 U50929 AB590690	-21362	+	AF257473 TSC_hg19_v1_chr5_+_78365591 AK298298 AK315520 BC020665 DQ891370 DQ894550 AB590411 CU676622	-63424	+	NM_001178005 NM_017614 TSC_hg19_v1_chr5_+_78365558	-63463	+	TSC_hg19_v1_chr5_+_78531933 NM_152405	102874	+	TSC_hg19_v1_chr5_+_78532339 AB590691	103387	+	BC047438 NM_004272	380661	-	NM_001713|BHMT|635|betaine--homocysteine S-methyltransferase##AK298308|BHMT|635|betaine--homocysteine S-methyltransferase##AK303780|BHMT|635|betaine--homocysteine S-methyltransferase##AK315224|BHMT|635|betaine--homocysteine S-methyltransferase##BC012616|BHMT|635|betaine--homocysteine S-methyltransferase##U50929|BHMT|635|betaine--homocysteine S-methyltransferase##AF257473|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK298298|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK315520|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##BC020665|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ891370|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ894550|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_001178005|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_017614|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor##BC047438|HOMER1|9456|homer homolog 1 (Drosophila)##NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)	0.871509	CTCF.p2:31:0.872
chr8	39847436	39847545	reg1020883.p1	6.925	+	AK128691 NM_194294	-55017	+	NM_002164 AK313259 BC027882 X17668 AY221100 CU693308 JF772862	-76106	+	X99374 CU687896 CU689996 DQ891615 DQ894807 AJ133005 U52370 BC034957 BC064547 AK301734 U38805 NM_001464	-151750	-	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	163528	+	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	907847	-	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	1319540	-	AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1##AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1##X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1##AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1##JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1##X99374|ADAM2|2515|ADAM metallopeptidase domain 2##DQ891615|ADAM2|2515|ADAM metallopeptidase domain 2##DQ894807|ADAM2|2515|ADAM metallopeptidase domain 2##AJ133005|ADAM2|2515|ADAM metallopeptidase domain 2##U52370|ADAM2|2515|ADAM metallopeptidase domain 2##BC034957|ADAM2|2515|ADAM metallopeptidase domain 2##BC064547|ADAM2|2515|ADAM metallopeptidase domain 2##AK301734|ADAM2|2515|ADAM metallopeptidase domain 2##U38805|ADAM2|2515|ADAM metallopeptidase domain 2##NM_001464|ADAM2|2515|ADAM metallopeptidase domain 2##BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1	1.205319	CTCF.p2:-16:0.639	CTCF.p2:-42:0.566
chrX	56760015	56760126	reg1019509.p1	6.925	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-4379	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-170019	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-501160	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	261901	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	387858	-	BC071694 NM_019003	403987	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.996566	CTCF.p2:15:0.997
chr4	156731086	156731229	reg1018699.p1	6.924	+	TSC_hg19_v1_chr4_+_156680603 AK299916	-50551	+	NM_000857 TSC_hg19_v1_chr4_+_156680190 AK315944 AK300296 AK315199 AK296680 AK307838 BC026332 BC060835 BC047620 X66533 AF020340	-50953	+	TSC_hg19_v1_chr4_+_156588813 NM_001130684 BC028384	-142340	+	AB528059 AJ252011 NM_017419	56243	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	93720	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	143891	-	AK299916|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##NM_001130684|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC028384|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O	0.982852	CTCF.p2:-38:0.983
chr8	110654843	110655013	reg1020467.p1	6.924	+	AK297182 TSC_hg19_v1_chr8_-_110620232	-34702	-	NM_004215 BC005249 BC022506 AK308950 AB007619 AF006265 AY515724	-102518	+	TSC_hg19_v1_chr8_+_110551942 NM_198120 AK290651 BC017729	-102943	+	NM_001099756	490	-	AY705385 AB384607 TSC_hg19_v1_chr8_-_110656972	2001	-	BC012082 AK090559 AK096558 TSC_hg19_v1_chr8_-_110657047 NM_001099753 NM_001099754 NM_001099755	2109	-	AK297182|SYBU|55638|syntabulin (syntaxin-interacting)##NM_004215|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC005249|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC022506|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK308950|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AB007619|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AF006265|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AY515724|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##NM_198120|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK290651|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC017729|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##NM_001099756|SYBU|55638|syntabulin (syntaxin-interacting)##AY705385|SYBU|55638|syntabulin (syntaxin-interacting)##BC012082|SYBU|55638|syntabulin (syntaxin-interacting)##AK090559|SYBU|55638|syntabulin (syntaxin-interacting)##AK096558|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099753|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099754|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099755|SYBU|55638|syntabulin (syntaxin-interacting)	0.135496	
chr19	44270720	44270847	reg1019790.p1	6.923	+	TSC_hg19_v1_chr19_-_44259117 NM_019108	-11655	-	TSC_hg19_v1_chr19_-_44259074 AK022948	-11690	-	TSC_hg19_v1_chr19_-_44259063 AK309830 BC008869 AL136606	-11763	-	AB128983 AB128984 AB128985 AF000972 AF022150 BT007426 CU677271 DQ891493 DQ894684 BC015337 AF395661 TSC_hg19_v1_chr19_-_44285137 AF033021	14292	-	TSC_hg19_v1_chr19_-_44285437 AF022797 NM_002250	14657	-	CU691254 AY358719 BC057816 AK301693 NM_001031749	35785	-	NM_019108|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK022948|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK309830|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC008869|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL136606|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AB128983|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128984|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128985|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF000972|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF022150|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##BT007426|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##DQ891493|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##DQ894684|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##BC015337|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF395661|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF033021|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF022797|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##NM_002250|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AY358719|LYPD5|284348|LY6/PLAUR domain containing 5##BC057816|LYPD5|284348|LY6/PLAUR domain containing 5##AK301693|LYPD5|284348|LY6/PLAUR domain containing 5##NM_001031749|LYPD5|284348|LY6/PLAUR domain containing 5	0.99822	CTCF.p2:20:0.998
chr8	22419582	22419672	reg1000859.p2	6.923	+	TSC_hg19_v1_chr8_+_22409439 AK303950 AF037261 BC067260	-10174	+	TSC_hg19_v1_chr8_+_22409237 BC091514 NM_005775	-10389	+	TSC_hg19_v1_chr8_+_22298813 AY007249 AB385002 CU678778	-120783	+	TSC_hg19_v1_chr8_+_22423258 NM_001018003 AF064807 BC010146	3610	+	AK092968 AX747829 NM_021630	16626	+	TSC_hg19_v1_chr8_+_22436642 AK027800 BC071774 AF289563 BC021556	17079	+	AK303950|SORBS3|10174|sorbin and SH3 domain containing 3##AF037261|SORBS3|10174|sorbin and SH3 domain containing 3##BC067260|SORBS3|10174|sorbin and SH3 domain containing 3##BC091514|SORBS3|10174|sorbin and SH3 domain containing 3##NM_005775|SORBS3|10174|sorbin and SH3 domain containing 3##AY007249|PPP3CC|5533|protein phosphatase 3, catalytic subunit, gamma isozyme##NM_001018003|SORBS3|10174|sorbin and SH3 domain containing 3##AF064807|SORBS3|10174|sorbin and SH3 domain containing 3##BC010146|SORBS3|10174|sorbin and SH3 domain containing 3##AK092968|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_021630|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK027800|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##BC071774|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AF289563|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##BC021556|PDLIM2|64236|PDZ and LIM domain 2 (mystique)	0.075648	
chr8	59372342	59372440	reg1018451.p1	6.923	+	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	-48506	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-465234	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1465965	-	X56088 M93133 BC101777 BC112184 NM_000780	40316	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	93361	+	BC113674 BC113676 BC143915 BC143916 TSC_hg19_v1_chr8_+_59465795 AK300647	93398	+	BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)##BC113674|SDCBP|6386|syndecan binding protein (syntenin)##BC113676|SDCBP|6386|syndecan binding protein (syntenin)##BC143915|SDCBP|6386|syndecan binding protein (syntenin)##BC143916|SDCBP|6386|syndecan binding protein (syntenin)##AK300647|SDCBP|6386|syndecan binding protein (syntenin)	0.142515	
chrX	38993363	38993489	reg1017092.p2	6.923	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-329886	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-329966	+	BC008908 NM_021242	-330354	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	963266	-	BC114220 NM_001123383 NM_001123384	1043155	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	1446760	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.0	
chr13	52158995	52159175	reg1019767.p4	6.922	+	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-350	+	TSC_hg19_v1_chr13_+_52158639 BC014004	-444	+	AK309815 TSC_hg19_v1_chr13_+_52158630	-452	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	219190	-	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	277109	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	426465	-	AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##BC014004|WDFY2|115825|WD repeat and FYVE domain containing 2##AK309815|WDFY2|115825|WD repeat and FYVE domain containing 2##BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide	0.0	
chr19	14999741	14999867	reg1019582.p1	6.922	+	HQ258148 NM_030901 BC101587 BC117357	-7590	-	NM_001005190	-47116	-	NM_017506	-60529	-	AB463980 NM_012377 BC110063	52495	+	NM_005071 U18244	83925	-	TSC_hg19_v1_chr19_-_15090354 BC028721 BC040604	90622	-	HQ258148|OR7A17|26333|olfactory receptor, family 7, subfamily A, member 17##NM_030901|OR7A17|26333|olfactory receptor, family 7, subfamily A, member 17##BC101587|OR7A17|26333|olfactory receptor, family 7, subfamily A, member 17##BC117357|OR7A17|26333|olfactory receptor, family 7, subfamily A, member 17##NM_001005190|OR7A10|390892|olfactory receptor, family 7, subfamily A, member 10##NM_017506|OR7A5|26659|olfactory receptor, family 7, subfamily A, member 5##NM_012377|OR7C2|26658|olfactory receptor, family 7, subfamily C, member 2##BC110063|OR7C2|26658|olfactory receptor, family 7, subfamily C, member 2##NM_005071|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##U18244|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##BC028721|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##BC040604|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6	0.694143	CTCF.p2:24:0.694
chr1	180889998	180890108	reg1020776.p1	6.921	+	NM_020950 AB046834	-7735	+	AF099082 TSC_hg19_v1_chr1_+_180601194 AF115389 CU691970	-288776	+	TSC_hg19_v1_chr1_+_180601171 BC041142 AF089744	-288885	+	TSC_hg19_v1_chr1_+_180897572 BC000118	7528	+	BC009944 TSC_hg19_v1_chr1_-_180992009 AK299063 AK312440	101957	-	TSC_hg19_v1_chr1_-_180992052 NM_005819	101996	-	NM_020950|KIAA1614|57710|KIAA1614##AB046834|KIAA1614|57710|KIAA1614##AF099082|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF115389|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##BC041142|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF089744|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##BC009944|STX6|10228|syntaxin 6##AK299063|STX6|10228|syntaxin 6##AK312440|STX6|10228|syntaxin 6##NM_005819|STX6|10228|syntaxin 6	0.304264	CTCF.p2:-12:0.304
chr1	6457207	6457296	reg1021123.p2	6.921	+	BC017365 AK057168 NM_007274	-3452	-	BT006888 TSC_hg19_v1_chr1_-_6453439 AB074415 AB074416 D88894 AK289572 AK300831	-3840	-	AK290097 AB074417 NM_181864	-11442	-	AB463714 BC132698 BC136963 BC142687 TSC_hg19_v1_chr1_-_6479976 AK091122 NM_019089	22679	-	TSC_hg19_v1_chr1_+_6484835 AL136880 NM_031475	27580	+	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	68951	-	BC017365|ACOT7|11332|acyl-CoA thioesterase 7##AK057168|ACOT7|11332|acyl-CoA thioesterase 7##NM_007274|ACOT7|11332|acyl-CoA thioesterase 7##BT006888|ACOT7|11332|acyl-CoA thioesterase 7##AB074415|ACOT7|11332|acyl-CoA thioesterase 7##AB074416|ACOT7|11332|acyl-CoA thioesterase 7##D88894|ACOT7|11332|acyl-CoA thioesterase 7##AK289572|ACOT7|11332|acyl-CoA thioesterase 7##AK300831|ACOT7|11332|acyl-CoA thioesterase 7##AK290097|ACOT7|11332|acyl-CoA thioesterase 7##AB074417|ACOT7|11332|acyl-CoA thioesterase 7##NM_181864|ACOT7|11332|acyl-CoA thioesterase 7##BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)##NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AL136880|ESPN|83715|espin##NM_031475|ESPN|83715|espin##U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25	0.876919	CTCF.p2:9:0.877
chr3	49333022	49333153	reg1019224.p1	6.921	+	BC032616 CU687502 CU691014 AK125642 BC061697 BC053629 NM_198562	-18693	-	AK303033 NM_001135197 BC015057 AK058049	-96127	+	BC036202 NM_178173	-97227	+	TSC_hg19_v1_chr3_-_49377456 AF017306	44360	-	AF017305 U20657 TSC_hg19_v1_chr3_-_49377473 AK222725 AK223292 BC068017	44381	-	TSC_hg19_v1_chr3_-_49377482 AK291795	44393	-	BC032616|C3orf62|375341|chromosome 3 open reading frame 62##AK125642|C3orf62|375341|chromosome 3 open reading frame 62##BC061697|C3orf62|375341|chromosome 3 open reading frame 62##BC053629|C3orf62|375341|chromosome 3 open reading frame 62##NM_198562|C3orf62|375341|chromosome 3 open reading frame 62##AK303033|CCDC36|339834|coiled-coil domain containing 36##NM_001135197|CCDC36|339834|coiled-coil domain containing 36##BC015057|CCDC36|339834|coiled-coil domain containing 36##AK058049|CCDC36|339834|coiled-coil domain containing 36##BC036202|CCDC36|339834|coiled-coil domain containing 36##NM_178173|CCDC36|339834|coiled-coil domain containing 36##AF017306|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##AF017305|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##U20657|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##AK222725|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##AK223292|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##BC068017|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##AK291795|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)	0.015454	
chr3	55523312	55523428	reg1037763.p1	6.921	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-1752	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-2038	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-7962	-	BC111550 BC112391 AB002376 NM_015576	979007	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	1067832	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	1067876	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.0	
chr5	118745056	118745192	reg1022996.p1	6.921	+	TSC_hg19_v1_chr5_+_118691713 AF099935 AK001850 AF099936 CU675493	-53386	+	BC007014 NM_014350 BC005352 TSC_hg19_v1_chr5_+_118691687	-53506	+	AF070671 TSC_hg19_v1_chr5_+_118604523	-140607	+	TSC_hg19_v1_chr5_+_118788215 NM_000414 NM_001199292 AK301212 AK312449 NM_001199291 BC003098 AK293254 AB208932 X87176 AK299685 AK298075 CU678374 DQ891866 DQ895055	43072	+	AF427126 AY692447 NM_001163991 NM_182761 BC040622 BC128242 BC128243	220192	+	BC011941 TSC_hg19_v1_chr5_-_119740564	995426	-	AF099935|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001850|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099936|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC007014|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_014350|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC005352|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF070671|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_000414|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199292|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK301212|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK312449|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199291|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC003098|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK293254|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##X87176|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK299685|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK298075|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ891866|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ895055|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AF427126|FAM170A|340069|family with sequence similarity 170, member A##AY692447|FAM170A|340069|family with sequence similarity 170, member A##NM_001163991|FAM170A|340069|family with sequence similarity 170, member A##NM_182761|FAM170A|340069|family with sequence similarity 170, member A##BC040622|FAM170A|340069|family with sequence similarity 170, member A##BC128242|FAM170A|340069|family with sequence similarity 170, member A##BC128243|FAM170A|340069|family with sequence similarity 170, member A	0.014396	
chr1	224962244	224962382	reg1023522.p1	6.920	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-158134	+	AB209887 NM_001115113 NM_025160	-340313	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-340553	-	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	155052	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	653416	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	653488	-	AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor	0.0	
chr12	96209553	96209647	reg1018610.p2	6.920	+	BC136798 BC136799 AF278532 NM_021229 AF119916 TSC_hg19_v1_chr12_-_96184542	-25074	-	TSC_hg19_v1_chr12_-_96184346 AF297711 AK226070 AK315796	-25231	-	AL136825 NM_032147	-264356	-	TSC_hg19_v1_chr12_+_96252729 NM_003095 BC002505 X85372 AK311752 BC063397	43133	+	TSC_hg19_v1_chr12_+_96252771 BC128452 BC128453	43187	+	BC030712 BC095479 BC047659 AK097408 NM_182496	126800	-	BC136798|NTN4|59277|netrin 4##BC136799|NTN4|59277|netrin 4##AF278532|NTN4|59277|netrin 4##NM_021229|NTN4|59277|netrin 4##AF119916|NTN4|59277|netrin 4##AF297711|NTN4|59277|netrin 4##AK226070|NTN4|59277|netrin 4##AK315796|NTN4|59277|netrin 4##AL136825|USP44|84101|ubiquitin specific peptidase 44##NM_032147|USP44|84101|ubiquitin specific peptidase 44##NM_003095|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC002505|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##X85372|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##AK311752|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC063397|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC128452|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC128453|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC095479|CCDC38|120935|coiled-coil domain containing 38##BC047659|CCDC38|120935|coiled-coil domain containing 38##AK097408|CCDC38|120935|coiled-coil domain containing 38##NM_182496|CCDC38|120935|coiled-coil domain containing 38	0.069636	
chr10	85963979	85964108	reg1020599.p2	6.919	+	AB593154 TSC_hg19_v1_chr10_+_85954408 AB593155 BC038799 NM_001171971 NM_033100 AB463200 AB053448	-9590	+	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	-30484	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	-32251	-	BX648524 NM_001017924 BC140765 BC144475	21270	-	AB463829 AB031547 NM_015613 DQ426882 DQ426881	37224	-	BX641033 NM_001012720 NM_001012722 NM_002921 U14910 BC011349 BC008094 BC042536 CU675929 DQ892074 DQ895267	40784	+	AB593154|CDHR1|92211|cadherin-related family member 1##AB593155|CDHR1|92211|cadherin-related family member 1##BC038799|CDHR1|92211|cadherin-related family member 1##NM_001171971|CDHR1|92211|cadherin-related family member 1##NM_033100|CDHR1|92211|cadherin-related family member 1##AB053448|CDHR1|92211|cadherin-related family member 1##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##BX648524|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##NM_001017924|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC140765|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC144475|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##AB031547|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##NM_015613|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##BX641033|RGR|5995|retinal G protein coupled receptor##NM_001012720|RGR|5995|retinal G protein coupled receptor##NM_001012722|RGR|5995|retinal G protein coupled receptor##NM_002921|RGR|5995|retinal G protein coupled receptor##U14910|RGR|5995|retinal G protein coupled receptor##BC011349|RGR|5995|retinal G protein coupled receptor##BC008094|RGR|5995|retinal G protein coupled receptor##BC042536|RGR|5995|retinal G protein coupled receptor##DQ892074|RGR|5995|retinal G protein coupled receptor##DQ895267|RGR|5995|retinal G protein coupled receptor	0.973732	CTCF.p2:12:0.974
chr2	45179452	45179575	reg1022678.p1	6.919	+	AJ012611 NM_005413 AL162671	-10467	+	NM_024766 TSC_hg19_v1_chr2_+_44589085 BC029359 AK027104 BC053733	-590421	+	AK131463 NM_001171603 NM_001171617	-590542	-	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	57037	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	615615	-	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	658894	-	AJ012611|SIX3|6496|SIX homeobox 3##NM_005413|SIX3|6496|SIX homeobox 3##AL162671|SIX3|6496|SIX homeobox 3##NM_024766|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC029359|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK027104|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC053733|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK131463|PREPL|9581|prolyl endopeptidase-like##NM_001171603|PREPL|9581|prolyl endopeptidase-like##NM_001171617|PREPL|9581|prolyl endopeptidase-like##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1	0.017158	
chr6_qbl_hap6	2138610	2138728	reg1020777.p2	6.919	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.669371	CTCF.p2:-5:0.669
chr8	26558766	26558909	reg1023160.p1	6.919	+	NM_001244604 TSC_hg19_v1_chr8_+_26435921 AK299077	-122910	+	TSC_hg19_v1_chr8_+_26435604 U17279 AB370194 AB590733 BT006944 CU691152	-123157	+	TSC_hg19_v1_chr8_+_26435468 AK223557 BC056408 D78013 BC010880 AK291287	-123310	+	U02569 AY491775 AY491776 AY491777 AY491778 AY491779 AY491780 AY491781 D25235 D32201 D32202 NM_000680 NM_033302 NM_033303 NM_033304	164081	-	AK311558 TSC_hg19_v1_chr8_-_26724735	165897	-	TSC_hg19_v1_chr8_-_26724764 AK289548	165921	-	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2##AK299077|DPYSL2|1808|dihydropyrimidinase-like 2##U17279|DPYSL2|1808|dihydropyrimidinase-like 2##AB370194|DPYSL2|1808|dihydropyrimidinase-like 2##AK223557|DPYSL2|1808|dihydropyrimidinase-like 2##BC056408|DPYSL2|1808|dihydropyrimidinase-like 2##D78013|DPYSL2|1808|dihydropyrimidinase-like 2##AK291287|DPYSL2|1808|dihydropyrimidinase-like 2##U02569|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491775|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491776|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491777|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491778|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491780|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491781|ADRA1A|148|adrenergic, alpha-1A-, receptor##D25235|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32201|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32202|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_000680|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033302|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033303|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033304|ADRA1A|148|adrenergic, alpha-1A-, receptor##AK289548|ADRA1A|148|adrenergic, alpha-1A-, receptor	0.0	
chrX	106898474	106898591	reg1021686.p1	6.919	+	AK307748 AK312706 AK316467 TSC_hg19_v1_chrX_+_106871744 AK297968 BC001605 X15331 AK223169 DQ895833 EU176362 AB464022 CU674782	-26734	+	NM_001204402 NM_002764 TSC_hg19_v1_chrX_+_106871719 D00860	-26837	+	BC033510 NM_001169154 NM_173494	-448671	+	BC018148 Z50781 NM_001015881	61121	-	CR533450 EU831656 EU831739 TSC_hg19_v1_chrX_-_106960193 AK311834 AY007119 AK127938	61597	-	AF153603 AF228339 AB025432 AF183393 BC072446 TSC_hg19_v1_chrX_-_106960293 AL110191 NM_004089 CR933650	61749	-	AK307748|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK312706|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK316467|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK297968|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC001605|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##X15331|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK223169|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##DQ895833|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##EU176362|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##NM_001204402|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##NM_002764|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##D00860|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC033510|CXorf41|139212|chromosome X open reading frame 41##NM_001169154|CXorf41|139212|chromosome X open reading frame 41##NM_173494|CXorf41|139212|chromosome X open reading frame 41##BC018148|TSC22D3|1831|TSC22 domain family, member 3##Z50781|TSC22D3|1831|TSC22 domain family, member 3##NM_001015881|TSC22D3|1831|TSC22 domain family, member 3##CR533450|TSC22D3|1831|TSC22 domain family, member 3##EU831656|TSC22D3|1831|TSC22 domain family, member 3##EU831739|TSC22D3|1831|TSC22 domain family, member 3##AK311834|TSC22D3|1831|TSC22 domain family, member 3##AY007119|TSC22D3|1831|TSC22 domain family, member 3##AK127938|TSC22D3|1831|TSC22 domain family, member 3##AF153603|TSC22D3|1831|TSC22 domain family, member 3##AF228339|TSC22D3|1831|TSC22 domain family, member 3##AB025432|TSC22D3|1831|TSC22 domain family, member 3##AF183393|TSC22D3|1831|TSC22 domain family, member 3##BC072446|TSC22D3|1831|TSC22 domain family, member 3##AL110191|TSC22D3|1831|TSC22 domain family, member 3##NM_004089|TSC22D3|1831|TSC22 domain family, member 3##CR933650|TSC22D3|1831|TSC22 domain family, member 3	1.005528	CTCF.p2:17:0.996
chr11	68899188	68899284	reg1018134.p1	6.918	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-41710	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-82810	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-82886	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	162386	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	556620	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	556674	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.017351	
chr4	78042173	78042297	reg1020996.p1	6.918	+	TSC_hg19_v1_chr4_-_77997145 BC000420 BC004975 NM_006835 AB209766 AK301111 AK312632	-45083	-	AK124592 CR627457 TSC_hg19_v1_chr4_+_77954068	-88230	+	TSC_hg19_v1_chr4_+_77871005 AK001711 AL110300 AK302700 BC063615 GU727629 AB587498	-171235	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	36126	+	TSC_hg19_v1_chr4_+_78078398 U47414	36225	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	37258	+	BC000420|CCNI|10983|cyclin I##BC004975|CCNI|10983|cyclin I##NM_006835|CCNI|10983|cyclin I##AB209766|CCNI|10983|cyclin I##AK301111|CCNI|10983|cyclin I##AK312632|CCNI|10983|cyclin I##AK124592|SEPT11|55752|septin 11##AK001711|SEPT11|55752|septin 11##AL110300|SEPT11|55752|septin 11##AK302700|SEPT11|55752|septin 11##BC063615|SEPT11|55752|septin 11##GU727629|SEPT11|55752|septin 11##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2	0.06102	
chrX	152927765	152927909	reg1021865.p1	6.918	+	TSC_hg19_v1_chrX_+_152912656 BC060837	-15097	+	TSC_hg19_v1_chrX_+_152908821 BC034936 BC042166	-18962	+	TSC_hg19_v1_chrX_+_152907894 AK314250 NM_001395 Y08302	-19898	+	AK303746 NM_001135740	10905	-	BC033746 AK296067 TSC_hg19_v1_chrX_-_152939308 BC064422	11491	-	AK309148 AK296203 NM_001039582 TSC_hg19_v1_chrX_-_152939817	11957	-	BC060837|DUSP9|1852|dual specificity phosphatase 9##BC034936|DUSP9|1852|dual specificity phosphatase 9##BC042166|DUSP9|1852|dual specificity phosphatase 9##AK314250|DUSP9|1852|dual specificity phosphatase 9##NM_001395|DUSP9|1852|dual specificity phosphatase 9##Y08302|DUSP9|1852|dual specificity phosphatase 9##AK303746|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##NM_001135740|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##BC033746|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK296067|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##BC064422|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK309148|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK296203|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##NM_001039582|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase	0.43332	CTCF.p2:-2:0.433
chr10	74034596	74034730	reg1020402.p6	6.917	+	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-839	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-58552	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-58875	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	80015	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	80263	-	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	249056	-	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1	0.917095	CTCF.p2:13:0.917
chr11	78125405	78125548	reg1019700.p2	6.917	+	AB011143 BC152459 NM_012296	-72551	-	AK056231 NM_020798 AK301048 AK307875 TSC_hg19_v1_chr11_+_77899953	-225551	+	TSC_hg19_v1_chr11_-_77899673 AK300320 BC036058 NM_001029859 AK095233	-225820	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	3330	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	3400	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	160316	-	AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##AK056231|USP35|57558|ubiquitin specific peptidase 35##NM_020798|USP35|57558|ubiquitin specific peptidase 35##AK301048|USP35|57558|ubiquitin specific peptidase 35##AK307875|USP35|57558|ubiquitin specific peptidase 35##AK300320|KCTD21|283219|potassium channel tetramerisation domain containing 21##BC036058|KCTD21|283219|potassium channel tetramerisation domain containing 21##NM_001029859|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK095233|KCTD21|283219|potassium channel tetramerisation domain containing 21##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##NM_080491|GAB2|9846|GRB2-associated binding protein 2##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)	0.995971	CTCF.p2:-11:0.996
chr19	7917850	7918030	reg1004563.p1	6.917	+	NM_001159944 AB449874	-6534	+	TSC_hg19_v1_chr19_+_7895113 NM_145245 BC014111	-22764	+	NM_001144904 NM_001144905 NM_001144906 NM_001144907 NM_001144908 NM_001144909 NM_001144910 NM_001144911 NM_014257 AK292278 BC038851 AF290887 AK304499 AK314704 AB015629 AF245219 AK298084 AK023750 BC110614 AY343913 DQ893779 AY042234 AY042235 AY042236 AY042237 AY042238 AY042239 AY042240	-89847	+	AL442075 TSC_hg19_v1_chr19_-_7934829	16877	-	NM_001190467 TSC_hg19_v1_chr19_-_7939337	21400	-	TSC_hg19_v1_chr19_+_7953422 AK091134 AX746798 BC070089 NM_025061 BX538180	35480	+	NM_001159944|EVI5L|115704|ecotropic viral integration site 5-like##AB449874|EVI5L|115704|ecotropic viral integration site 5-like##NM_145245|EVI5L|115704|ecotropic viral integration site 5-like##BC014111|EVI5L|115704|ecotropic viral integration site 5-like##NM_001144904|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144905|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144906|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144907|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144908|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144909|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144910|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144911|CLEC4M|10332|C-type lectin domain family 4, member M##NM_014257|CLEC4M|10332|C-type lectin domain family 4, member M##AK292278|CLEC4M|10332|C-type lectin domain family 4, member M##BC038851|CLEC4M|10332|C-type lectin domain family 4, member M##AF290887|CLEC4M|10332|C-type lectin domain family 4, member M##AK304499|CLEC4M|10332|C-type lectin domain family 4, member M##AK314704|CLEC4M|10332|C-type lectin domain family 4, member M##AB015629|CLEC4M|10332|C-type lectin domain family 4, member M##AF245219|CLEC4M|10332|C-type lectin domain family 4, member M##AK298084|CLEC4M|10332|C-type lectin domain family 4, member M##AK023750|CLEC4M|10332|C-type lectin domain family 4, member M##BC110614|CLEC4M|10332|C-type lectin domain family 4, member M##AY343913|CLEC4M|10332|C-type lectin domain family 4, member M##DQ893779|CLEC4M|10332|C-type lectin domain family 4, member M##AY042234|CLEC4M|10332|C-type lectin domain family 4, member M##AY042235|CLEC4M|10332|C-type lectin domain family 4, member M##AY042236|CLEC4M|10332|C-type lectin domain family 4, member M##AY042237|CLEC4M|10332|C-type lectin domain family 4, member M##AY042238|CLEC4M|10332|C-type lectin domain family 4, member M##AY042239|CLEC4M|10332|C-type lectin domain family 4, member M##AY042240|CLEC4M|10332|C-type lectin domain family 4, member M##AL442075|FLJ22184|80164|putative uncharacterized protein FLJ22184##NM_001190467|FLJ22184|80164|putative uncharacterized protein FLJ22184##AK091134|LRRC8E|80131|leucine rich repeat containing 8 family, member E##BC070089|LRRC8E|80131|leucine rich repeat containing 8 family, member E##NM_025061|LRRC8E|80131|leucine rich repeat containing 8 family, member E##BX538180|LRRC8E|80131|leucine rich repeat containing 8 family, member E	0.373996	CTCF.p2:-20:0.374
chr2	169543987	169544117	reg1020192.p1	6.917	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	-231177	+	TSC_hg19_v1_chr2_+_169312764 AK172775	-231293	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	-439979	-	AK093444 AX748130 NM_001171631	98996	+	NM_001039724 NM_001171632 BC014189 NM_052946 AK002203 AK290254 BC093072 AJ532842 DQ402497	115075	+	TSC_hg19_v1_chr2_-_169746945 AF225416 BC022255 NM_020675 AK291093	202889	-	NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6##AK172775|CERS6|253782|ceramide synthase 6##BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##AK093444|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171631|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001039724|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171632|NOSTRIN|115677|nitric oxide synthase trafficker##BC014189|NOSTRIN|115677|nitric oxide synthase trafficker##NM_052946|NOSTRIN|115677|nitric oxide synthase trafficker##AK002203|NOSTRIN|115677|nitric oxide synthase trafficker##AK290254|NOSTRIN|115677|nitric oxide synthase trafficker##BC093072|NOSTRIN|115677|nitric oxide synthase trafficker##AJ532842|NOSTRIN|115677|nitric oxide synthase trafficker##DQ402497|NOSTRIN|115677|nitric oxide synthase trafficker##AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	0.960923	CTCF.p2:14:0.961
chr22	25453379	25453484	reg1020419.p2	6.917	+	BC171801 NM_001145206	-29491	+	BC130647 BC130649 CR456388 NM_001001663	-118119	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-251221	+	TSC_hg19_v1_chr22_+_25591072 AK025418	137698	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	142413	+	NM_000496	162180	+	BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AK025418|KIAA1671|85379|KIAA1671##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##NM_000496|CRYBB2|1415|crystallin, beta B2	0.157926	
chr3	160646228	160646355	reg1020270.p1	6.917	+	AY337264 NM_139245	-172296	+	TSC_hg19_v1_chr3_+_160473386 BC110801	-172951	+	AK026248 NM_025047 BC034354	-251336	+	AB050856 NM_033169 TSC_hg19_v1_chr3_-_160823138 AY359049 BC047618 AK223439 BC028571 AF154848 AK022491 AK095917 NM_001038628 NM_003781 NM_033167 NM_033168	176646	-	AK225664 TSC_hg19_v1_chr3_+_160939097	292805	+	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	292830	+	AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##BC110801|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AK026248|ARL14|80117|ADP-ribosylation factor-like 14##NM_025047|ARL14|80117|ADP-ribosylation factor-like 14##BC034354|ARL14|80117|ADP-ribosylation factor-like 14##AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK225664|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)	0.023371	
chr4	60027108	60027252	reg1023751.p1	6.917	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-2050612	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-2050648	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-2050781	-	TSC_hg19_v1_chr4_+_62066948 AK309793	2039795	+	NM_015236	2335658	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	5247916	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.909599	CTCF.p2:0:0.910
chr7	103908336	103908467	reg1021826.p1	6.917	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-59970	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-278405	-	TSC_hg19_v1_chr7_-_103086511 AF523354 AY256823 AY256824 AY256825 AK126898 NM_001167962 NM_198999 NM_206883 NM_206884 NM_206885	-821834	-	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	60817	+	TSC_hg19_v1_chr7_-_104567089 BC050337	658689	-	TSC_hg19_v1_chr7_-_104653491 AK124046	745081	-	DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##AF523354|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256823|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256824|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256825|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AK126898|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_001167962|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_198999|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206883|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206884|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206885|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC050337|LOC723809|723809|uncharacterized LOC723809##AK124046|LOC100216545|100216545|uncharacterized LOC100216545	0.984609	CTCF.p2:10:0.985
chr7	18650107	18650214	reg1020113.p2	6.917	+	TSC_hg19_v1_chr7_+_18548965 AK304343	-101191	+	NM_001204147 NM_001204148 TSC_hg19_v1_chr7_+_18548932 AK304410	-101237	+	CR749550 EU832154 EU832248 TSC_hg19_v1_chr7_+_18535882 NM_058176 NM_178425 AB385379 AY032737 AY032738 AY197371 EU832247 BC111735	-114289	+	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	507118	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	534853	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	1098486	-	AK304343|HDAC9|9734|histone deacetylase 9##NM_001204147|HDAC9|9734|histone deacetylase 9##NM_001204148|HDAC9|9734|histone deacetylase 9##AK304410|HDAC9|9734|histone deacetylase 9##CR749550|HDAC9|9734|histone deacetylase 9##EU832154|HDAC9|9734|histone deacetylase 9##EU832248|HDAC9|9734|histone deacetylase 9##NM_058176|HDAC9|9734|histone deacetylase 9##NM_178425|HDAC9|9734|histone deacetylase 9##AY032737|HDAC9|9734|histone deacetylase 9##AY032738|HDAC9|9734|histone deacetylase 9##AY197371|HDAC9|9734|histone deacetylase 9##EU832247|HDAC9|9734|histone deacetylase 9##BC111735|HDAC9|9734|histone deacetylase 9##BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor	0.011786	
chr1	32443459	32443568	reg1019093.p1	6.916	+	TSC_hg19_v1_chr1_-_32403992 NM_080391	-39516	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	-39582	-	NM_001195100 NM_001195101	-58255	-	TSC_hg19_v1_chr1_+_32479463 AK293369 AK091346 AX746925 AK312916 AK303218 BC000717 BC019109 M88108 NM_006559 BC010132 AB590354 DQ895323 U78971	35985	+	TSC_hg19_v1_chr1_+_32538502 AK023331 NM_018056	94991	+	AL136695 TSC_hg19_v1_chr1_+_32538539 AK001177 BC004364 AK296653 AK298766 AK300293	95061	+	NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK023331|TMEM39B|55116|transmembrane protein 39B##NM_018056|TMEM39B|55116|transmembrane protein 39B##AL136695|TMEM39B|55116|transmembrane protein 39B##AK001177|TMEM39B|55116|transmembrane protein 39B##BC004364|TMEM39B|55116|transmembrane protein 39B##AK296653|TMEM39B|55116|transmembrane protein 39B##AK298766|TMEM39B|55116|transmembrane protein 39B##AK300293|TMEM39B|55116|transmembrane protein 39B	0.586361	CTCF.p2:-5:0.586
chr20	15823657	15823771	reg1021246.p1	6.916	+	BC018687 NM_001033087	-646211	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-1505458	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-1847378	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	730299	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	886949	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	905307	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	0.959288	CTCF.p2:-19:0.959
chr5	149185449	149185629	reg1020238.p1	6.916	+	AK123614 NM_001172699	-34037	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	-75663	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	-75712	+	BC144044 BC035909 AB593141 M26061 NM_000440	138779	-	TSC_hg19_v1_chr5_+_149340320 NM_000112	154769	+	TSC_hg19_v1_chr5_+_149340352 AK312596	154812	+	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144044|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##BC035909|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##AB593141|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##M26061|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000440|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2	0.0	
chr8	60214711	60214871	reg1021280.p1	6.916	+	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	-183119	-	NM_003580 TSC_hg19_v1_chr8_-_59572413	-642380	-	BC041124 TSC_hg19_v1_chr8_-_59572386	-642405	-	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	979130	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	1214649	+	AK297576 TSC_hg19_v1_chr8_+_61429494	1214703	+	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC041124|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family##AK297576|RAB2A|5862|RAB2A, member RAS oncogene family	0.314756	CTCF.p2:23:0.296
chr1	68786895	68787051	reg1024172.p1	6.915	+	TSC_hg19_v1_chr1_-_68698207 BC137109 BC137113 BC110826 AB097018 AK074984 AK301613 BX648748 BX538320 NM_001002292 NM_001193334 AK074583 AK309779 DQ323735 AY359035 NM_024911	-88816	-	BC005362 U96750 NM_004675	-270588	-	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	-487863	-	AK289925 BC075035 BC075036 NM_000329 U18991	128663	-	CU688044 BC065304 BC011743 BC035506 BC041580 TSC_hg19_v1_chr1_-_68962723	175728	-	TSC_hg19_v1_chr1_-_68962766 AK225735 BC003511 AB281187 AB281274 AK000361 AK299324 NM_001114120 NM_017779	175808	-	BC137109|WLS|79971|wntless homolog (Drosophila)##BC137113|WLS|79971|wntless homolog (Drosophila)##BC110826|WLS|79971|wntless homolog (Drosophila)##AB097018|WLS|79971|wntless homolog (Drosophila)##AK074984|WLS|79971|wntless homolog (Drosophila)##AK301613|WLS|79971|wntless homolog (Drosophila)##BX648748|WLS|79971|wntless homolog (Drosophila)##BX538320|WLS|79971|wntless homolog (Drosophila)##NM_001002292|WLS|79971|wntless homolog (Drosophila)##NM_001193334|WLS|79971|wntless homolog (Drosophila)##AK074583|WLS|79971|wntless homolog (Drosophila)##AK309779|WLS|79971|wntless homolog (Drosophila)##DQ323735|WLS|79971|wntless homolog (Drosophila)##AY359035|WLS|79971|wntless homolog (Drosophila)##NM_024911|WLS|79971|wntless homolog (Drosophila)##BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC065304|DEPDC1|55635|DEP domain containing 1##BC011743|DEPDC1|55635|DEP domain containing 1##BC035506|DEPDC1|55635|DEP domain containing 1##BC041580|DEPDC1|55635|DEP domain containing 1##AK225735|DEPDC1|55635|DEP domain containing 1##BC003511|DEPDC1|55635|DEP domain containing 1##AB281187|DEPDC1|55635|DEP domain containing 1##AB281274|DEPDC1|55635|DEP domain containing 1##AK000361|DEPDC1|55635|DEP domain containing 1##AK299324|DEPDC1|55635|DEP domain containing 1##NM_001114120|DEPDC1|55635|DEP domain containing 1##NM_017779|DEPDC1|55635|DEP domain containing 1	0.964835	CTCF.p2:-7:0.965
chr11	117689928	117690051	reg1020573.p2	6.914	+	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	-22030	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	-22136	-	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-491158	+	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	5445	-	BT006721 BC005302 NM_021603	8777	-	AL136699 TSC_hg19_v1_chr11_-_117747374 AY358976 BC018652 BC093040 AK311736 AL832811 AK290757	57400	-	AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2##BT006721|FXYD2|486|FXYD domain containing ion transport regulator 2##BC005302|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_021603|FXYD2|486|FXYD domain containing ion transport regulator 2##AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6##AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6	0.315702	CTCF.p2:-3:0.316
chr2	96808103	96808217	reg1019730.p1	6.914	+	BC107126 AJ537600 BC107127 NM_001002036	-3987	-	NM_000682 AB527942 BC133021 BC136537	-26225	-	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	-107466	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	2794	-	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	2999	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	65895	-	BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.428176	CTCF.p2:3:0.428
chr5	141990768	141990870	reg1020413.p1	6.914	+	TSC_hg19_v1_chr5_-_141704587 AK096464 NM_001127496 NM_030964	-286185	-	BC125095 BC125096 TSC_hg19_v1_chr5_-_141704555 AF227516 AF227517	-286299	-	TSC_hg19_v1_chr5_+_141488389 AB097010 AB097037 BC004317	-502409	+	S67291 S67292 S67294 AB528663 X65778 X65779 M13361 NM_033137 X51943	2889	-	L01487 BC032697 NM_001144892	10083	-	M60516 NM_000800	74800	-	AK096464|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_001127496|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_030964|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125095|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125096|SPRY4|81848|sprouty homolog 4 (Drosophila)##AF227516|SPRY4|81848|sprouty homolog 4 (Drosophila)##AB097010|NDFIP1|80762|Nedd4 family interacting protein 1##AB097037|NDFIP1|80762|Nedd4 family interacting protein 1##BC004317|NDFIP1|80762|Nedd4 family interacting protein 1##S67291|FGF1|2246|fibroblast growth factor 1 (acidic)##S67292|FGF1|2246|fibroblast growth factor 1 (acidic)##S67294|FGF1|2246|fibroblast growth factor 1 (acidic)##X65778|FGF1|2246|fibroblast growth factor 1 (acidic)##X65779|FGF1|2246|fibroblast growth factor 1 (acidic)##M13361|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)##X51943|FGF1|2246|fibroblast growth factor 1 (acidic)##L01487|FGF1|2246|fibroblast growth factor 1 (acidic)##BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)##M60516|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)	0.655171	CTCF.p2:-1:0.655
chr14	104073523	104073655	reg1020033.p1	6.913	+	TSC_hg19_v1_chr14_+_104029325 AK299527 NM_032374 AK223092 AK223103 BC007412	-44278	+	TSC_hg19_v1_chr14_-_104028984 AB020680 NM_001015048	-44528	-	AK291312 AK225741 TSC_hg19_v1_chr14_-_104028604 BC044216 AF095195 AK225730 BC050551 NM_001015049 NM_004873	-44974	-	TSC_hg19_v1_chr14_+_104095547 NM_001130107 NM_005552 NM_182923 AK294508 BC008881 L04733 AF527736 AY180164	22062	+	AK124498 TSC_hg19_v1_chr14_-_104178577	104919	-	TSC_hg19_v1_chr14_-_104181759 AK022829 BC011725 BX161398 BC001036 AK023646 NM_001100118 NM_001100119 NM_005432	108194	-	NM_032374|APOPT1|84334|apoptogenic 1##AK223092|APOPT1|84334|apoptogenic 1##AK223103|APOPT1|84334|apoptogenic 1##BC007412|APOPT1|84334|apoptogenic 1##AB020680|BAG5|9529|BCL2-associated athanogene 5##NM_001015048|BAG5|9529|BCL2-associated athanogene 5##AK291312|BAG5|9529|BCL2-associated athanogene 5##AK225741|BAG5|9529|BCL2-associated athanogene 5##BC044216|BAG5|9529|BCL2-associated athanogene 5##AF095195|BAG5|9529|BCL2-associated athanogene 5##AK225730|BAG5|9529|BCL2-associated athanogene 5##BC050551|BAG5|9529|BCL2-associated athanogene 5##NM_001015049|BAG5|9529|BCL2-associated athanogene 5##NM_004873|BAG5|9529|BCL2-associated athanogene 5##NM_001130107|KLC1|3831|kinesin light chain 1##NM_005552|KLC1|3831|kinesin light chain 1##NM_182923|KLC1|3831|kinesin light chain 1##AK294508|KLC1|3831|kinesin light chain 1##BC008881|KLC1|3831|kinesin light chain 1##L04733|KLC1|3831|kinesin light chain 1##AF527736|KLC1|3831|kinesin light chain 1##AY180164|KLC1|3831|kinesin light chain 1##AK124498|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK022829|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC011725|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BX161398|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC001036|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK023646|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100118|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100119|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_005432|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3	0.0	
chr1	148739747	148739871	reg1020864.p1	6.912	+	NM_001102663 AK290302 AY894562 AY894566	-308	+	NM_001144032	-95799	+	NM_001102663 AK290302 AY894566	-162393	+	NM_001164261 NM_001164262	66205	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	659387	-	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	813214	+	NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001144032|PPIAL4E|730262|peptidylprolyl isomerase A (cyclophilin A)-like 4E##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	0.389166	CTCF.p2:4:0.389
chr15	79317729	79317829	reg1019048.p1	6.912	+	NM_153815 S62035	-19778	-	TSC_hg19_v1_chr15_-_79237389 AL110099 BC002479 BC018821 AK309491 AK314698 D28436 AK130158 NM_004390	-80380	-	TSC_hg19_v1_chr15_-_79237350 AF426247 AF426248 CR456881 CU677980 DQ890683 DQ893772 AK295583 X16832	-80444	-	L26584 CU691844 AB385192 TSC_hg19_v1_chr15_-_79382954	65120	-	AK290135 TSC_hg19_v1_chr15_-_79383114 BC040275 NM_001145648 NM_002891	65369	-	AK127037 NM_001146341	257366	+	NM_153815|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##S62035|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AL110099|CTSH|1512|cathepsin H##BC002479|CTSH|1512|cathepsin H##BC018821|CTSH|1512|cathepsin H##AK309491|CTSH|1512|cathepsin H##AK314698|CTSH|1512|cathepsin H##D28436|CTSH|1512|cathepsin H##AK130158|CTSH|1512|cathepsin H##NM_004390|CTSH|1512|cathepsin H##AF426247|CTSH|1512|cathepsin H##AF426248|CTSH|1512|cathepsin H##CR456881|CTSH|1512|cathepsin H##DQ890683|CTSH|1512|cathepsin H##DQ893772|CTSH|1512|cathepsin H##X16832|CTSH|1512|cathepsin H##L26584|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK290135|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##BC040275|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_001145648|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_002891|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK127037|ANKRD34C|390616|ankyrin repeat domain 34C##NM_001146341|ANKRD34C|390616|ankyrin repeat domain 34C	0.815424	CTCF.p2:-7:0.815
chr21	16236684	16236840	reg1008429.p1	6.912	+	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	-318113	-	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-481289	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-648265	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	200455	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	865563	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	865779	+	BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25	0.962473	CTCF.p2:-17:0.962
chr8	81492218	81492345	reg1018791.p2	6.912	+	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-93797	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-408511	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-499252	-	AK131274 NM_001033723	294734	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	532033	-	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	700492	+	AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)	0.062458	
chrX	134220613	134220730	reg1020813.p2	6.912	+	BC008096 TSC_hg19_v1_chrX_-_134186208 BC071991 AL117556 BC000393 BC019300 NM_001078172 NM_001134321	-34542	-	TSC_hg19_v1_chrX_+_134166384 NM_001078171 Y13374 AF038168 AF052096 BC106076 BC002385 BC002410	-54311	+	HQ258053 TSC_hg19_v1_chrX_-_134156520 BC063496 BC073159 BC113720 BC117393 BC086860 NM_001078173	-64128	-	AK123302 TSC_hg19_v1_chrX_-_134232743	12064	-	AF520814 AY352211 NM_001031705 NM_017863	85079	-	AK091687 AX747129 NM_001185063 NM_007131 AK290215	209301	-	BC008096|FAM127B|26071|family with sequence similarity 127, member B##BC071991|FAM127B|26071|family with sequence similarity 127, member B##AL117556|FAM127B|26071|family with sequence similarity 127, member B##BC000393|FAM127B|26071|family with sequence similarity 127, member B##BC019300|FAM127B|26071|family with sequence similarity 127, member B##NM_001078172|FAM127B|26071|family with sequence similarity 127, member B##NM_001134321|FAM127B|26071|family with sequence similarity 127, member B##NM_001078171|FAM127A|8933|family with sequence similarity 127, member A##Y13374|FAM127A|8933|family with sequence similarity 127, member A##AF038168|FAM127A|8933|family with sequence similarity 127, member A##AF052096|FAM127A|8933|family with sequence similarity 127, member A##BC106076|FAM127A|8933|family with sequence similarity 127, member A##BC002385|FAM127A|8933|family with sequence similarity 127, member A##BC002410|FAM127A|8933|family with sequence similarity 127, member A##HQ258053|FAM127C|441518|family with sequence similarity 127, member C##BC063496|FAM127C|441518|family with sequence similarity 127, member C##BC073159|FAM127C|441518|family with sequence similarity 127, member C##BC113720|FAM127C|441518|family with sequence similarity 127, member C##BC117393|FAM127C|441518|family with sequence similarity 127, member C##BC086860|FAM127C|441518|family with sequence similarity 127, member C##NM_001078173|FAM127C|441518|family with sequence similarity 127, member C##AK123302|LINC00087|644596|long intergenic non-protein coding RNA 87##AF520814|CXorf48|54967|chromosome X open reading frame 48##AY352211|CXorf48|54967|chromosome X open reading frame 48##NM_001031705|CXorf48|54967|chromosome X open reading frame 48##NM_017863|CXorf48|54967|chromosome X open reading frame 48##AK091687|ZNF75D|7626|zinc finger protein 75D##NM_001185063|ZNF75D|7626|zinc finger protein 75D##NM_007131|ZNF75D|7626|zinc finger protein 75D##AK290215|ZNF75D|7626|zinc finger protein 75D	0.997384	CTCF.p2:-3:0.997
chr1	231114865	231114979	reg1020451.p1	6.911	+	TSC_hg19_v1_chr1_+_231114847 CU677601	-58	+	AF321442 TSC_hg19_v1_chr1_+_231114837 AK293049 AF271780 AF290878 NM_022786 BC016309 AK026629	-107	+	NM_001122835 NM_024525 TSC_hg19_v1_chr1_-_231114629	-281	-	TSC_hg19_v1_chr1_-_231176001 BC009447 NM_198552	61069	-	AK126782 NM_001004342 AY253917	183772	+	CU691424 TSC_hg19_v1_chr1_-_231376913 BC053609 AK303359 BC036800 BC062353 NM_152379 AK055124	261974	-	AF321442|ARV1|64801|ARV1 homolog (S. cerevisiae)##AK293049|ARV1|64801|ARV1 homolog (S. cerevisiae)##AF271780|ARV1|64801|ARV1 homolog (S. cerevisiae)##AF290878|ARV1|64801|ARV1 homolog (S. cerevisiae)##NM_022786|ARV1|64801|ARV1 homolog (S. cerevisiae)##BC016309|ARV1|64801|ARV1 homolog (S. cerevisiae)##AK026629|ARV1|64801|ARV1 homolog (S. cerevisiae)##NM_001122835|TTC13|79573|tetratricopeptide repeat domain 13##NM_024525|TTC13|79573|tetratricopeptide repeat domain 13##BC009447|FAM89A|375061|family with sequence similarity 89, member A##NM_198552|FAM89A|375061|family with sequence similarity 89, member A##AK126782|TRIM67|440730|tripartite motif containing 67##NM_001004342|TRIM67|440730|tripartite motif containing 67##AY253917|TRIM67|440730|tripartite motif containing 67##BC053609|C1orf131|128061|chromosome 1 open reading frame 131##AK303359|C1orf131|128061|chromosome 1 open reading frame 131##BC036800|C1orf131|128061|chromosome 1 open reading frame 131##BC062353|C1orf131|128061|chromosome 1 open reading frame 131##NM_152379|C1orf131|128061|chromosome 1 open reading frame 131##AK055124|C1orf131|128061|chromosome 1 open reading frame 131	0.0	
chr1	247537320	247537442	reg1018617.p2	6.911	+	TSC_hg19_v1_chr1_-_247494994 BC007263 NM_032752	-42364	-	BC126341 BC126367 NM_173858	-118058	+	BC032514 BC096349 BC096350 BC096351 BC099661 BC013605 AK054647 NM_001243740 NM_003431	-202097	-	AK314998 NM_001079821 NM_001127461 TSC_hg19_v1_chr1_+_247579474 AB208891	42088	+	AF410477 AF427617 NM_001127462 NM_001243133 NM_004895 NM_183395	43969	+	NM_001004492 BC137181 BC137205	77914	-	BC007263|ZNF496|84838|zinc finger protein 496##NM_032752|ZNF496|84838|zinc finger protein 496##BC126341|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC126367|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##NM_173858|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC032514|ZNF124|7678|zinc finger protein 124##BC096349|ZNF124|7678|zinc finger protein 124##BC096350|ZNF124|7678|zinc finger protein 124##BC096351|ZNF124|7678|zinc finger protein 124##BC099661|ZNF124|7678|zinc finger protein 124##BC013605|ZNF124|7678|zinc finger protein 124##AK054647|ZNF124|7678|zinc finger protein 124##NM_001243740|ZNF124|7678|zinc finger protein 124##NM_003431|ZNF124|7678|zinc finger protein 124##AK314998|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001079821|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127461|NLRP3|114548|NLR family, pyrin domain containing 3##AB208891|NLRP3|114548|NLR family, pyrin domain containing 3##AF410477|NLRP3|114548|NLR family, pyrin domain containing 3##AF427617|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127462|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001243133|NLRP3|114548|NLR family, pyrin domain containing 3##NM_004895|NLRP3|114548|NLR family, pyrin domain containing 3##NM_183395|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001004492|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##BC137181|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##BC137205|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11	0.996802	CTCF.p2:-25:0.997
chr12	93491952	93492052	reg1018031.p1	6.911	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-168904	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-168959	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	-169064	-	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	279890	+	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	343684	-	TSC_hg19_v1_chr12_-_93835718 D83004	343716	-	NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.999199	CTCF.p2:-26:0.999
chr11	122925108	122925248	reg1019106.p1	6.910	+	AB231738 NM_001098169	-72822	-	AK097534 BC068507 NM_024806 NM_199124	-171747	+	BC070266 AK313578 AF001622 NM_019604	-215949	+	AB034951 BC016179 BC016660 BC019816 AF352832 TSC_hg19_v1_chr11_-_122932842 AK222628 AK222785 AK096100 AK129885 AK303935	7646	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	7701	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	140724	-	AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AB034951|HSPA8|3312|heat shock 70kDa protein 8##BC016179|HSPA8|3312|heat shock 70kDa protein 8##BC016660|HSPA8|3312|heat shock 70kDa protein 8##BC019816|HSPA8|3312|heat shock 70kDa protein 8##AF352832|HSPA8|3312|heat shock 70kDa protein 8##AK222628|HSPA8|3312|heat shock 70kDa protein 8##AK222785|HSPA8|3312|heat shock 70kDa protein 8##AK096100|HSPA8|3312|heat shock 70kDa protein 8##AK129885|HSPA8|3312|heat shock 70kDa protein 8##AK303935|HSPA8|3312|heat shock 70kDa protein 8##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein	0.999766	CTCF.p2:4:1.000
chr11	45274075	45274209	reg1022262.p1	6.910	+	AF275818 NM_020229	-158579	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	-301725	-	TSC_hg19_v1_chr11_-_44956087 AF010315	-318035	-	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	33608	-	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	413042	-	NM_001145265 NM_001145266	551480	+	AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1	0.541067	CTCF.p2:-8:0.541
chr13	19728369	19728506	reg1024001.p1	6.910	+	None	None	None	None	None	None	None	None	None	BC011721 NM_006001	27525	-	BC128146 BC128147 AJ421032 AY219890 NM_001141968 NM_130785 NM_199254	382456	-	TSC_hg19_v1_chr13_+_20207808 AK300258 NM_017520 BC017322 AK092556 AX747597 AL832864 BC003542	479398	+	BC011721|TUBA3C|7278|tubulin, alpha 3c##NM_006001|TUBA3C|7278|tubulin, alpha 3c##BC128146|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##BC128147|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AJ421032|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AY219890|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_001141968|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_130785|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_199254|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AK300258|MPHOSPH8|54737|M-phase phosphoprotein 8##NM_017520|MPHOSPH8|54737|M-phase phosphoprotein 8##BC017322|MPHOSPH8|54737|M-phase phosphoprotein 8##AK092556|MPHOSPH8|54737|M-phase phosphoprotein 8##AL832864|MPHOSPH8|54737|M-phase phosphoprotein 8##BC003542|MPHOSPH8|54737|M-phase phosphoprotein 8	0.813418	CTCF.p2:-17:0.813
chr15	55806199	55806299	reg1020295.p1	6.910	+	AF337549 NM_001033559 NM_001033560 NM_130810	-5818	-	NM_001198784 AK130862 BX648577	-105454	+	AK292795 BC039871 TSC_hg19_v1_chr15_-_55700478 BC027621 AB033080 AK022459 BC015203 NM_004748 NM_001204450 NM_001204451 NM_020739	-105668	-	EF625686 TSC_hg19_v1_chr15_-_55880544	74283	-	AF457207 NM_015617	74800	-	AY630258 NM_173814 TSC_hg19_v1_chr15_-_56035276	228977	-	AF337549|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001033559|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001033560|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_130810|DYX1C1|161582|dyslexia susceptibility 1 candidate 1##NM_001198784|FLJ27352|145788|uncharacterized LOC145788##AK130862|FLJ27352|145788|uncharacterized LOC145788##BX648577|FLJ27352|145788|uncharacterized LOC145788##AK292795|CCPG1|9236|cell cycle progression 1##BC039871|CCPG1|9236|cell cycle progression 1##BC027621|CCPG1|9236|cell cycle progression 1##AB033080|CCPG1|9236|cell cycle progression 1##AK022459|CCPG1|9236|cell cycle progression 1##BC015203|CCPG1|9236|cell cycle progression 1##NM_004748|CCPG1|9236|cell cycle progression 1##NM_001204450|CCPG1|9236|cell cycle progression 1##NM_001204451|CCPG1|9236|cell cycle progression 1##NM_020739|CCPG1|9236|cell cycle progression 1##EF625686|PYGO1|26108|pygopus homolog 1 (Drosophila)##AF457207|PYGO1|26108|pygopus homolog 1 (Drosophila)##NM_015617|PYGO1|26108|pygopus homolog 1 (Drosophila)##AY630258|PRTG|283659|protogenin##NM_173814|PRTG|283659|protogenin	0.0	
chr15	93579312	93579409	reg1018434.p2	6.910	+	AK295909 TSC_hg19_v1_chr15_+_93447798	-131600	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	-135780	+	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	-135874	+	AL390083 TSC_hg19_v1_chr15_-_93616347	36968	-	TSC_hg19_v1_chr15_-_93616364 AK074966 BC015886 NM_001166286	37013	-	AK309814 AK125204 NM_001166288 NM_001166289	37554	-	AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##AL390083|RGMA|56963|RGM domain family, member A##AK074966|RGMA|56963|RGM domain family, member A##BC015886|RGMA|56963|RGM domain family, member A##NM_001166286|RGMA|56963|RGM domain family, member A##AK309814|RGMA|56963|RGM domain family, member A##AK125204|RGMA|56963|RGM domain family, member A##NM_001166288|RGMA|56963|RGM domain family, member A##NM_001166289|RGMA|56963|RGM domain family, member A	0.959068	CTCF.p2:-2:0.959
chr18	18775310	18775430	reg1017975.p1	6.910	+	TSC_hg19_v1_chr18_-_18691765 AK057038 NM_005406	-83582	-	TSC_hg19_v1_chr18_-_18691640 AK307388	-83732	-	AF269088 NM_001145029 BC028407	-4027085	+	TSC_hg19_v1_chr18_+_18822192 AB051559 NM_001142966 BC125017	46873	+	TSC_hg19_v1_chr18_-_19180616 AB067498	405249	-	TSC_hg19_v1_chr18_-_19180666 NM_052911 AK096746	405308	-	AK057038|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##NM_005406|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AK307388|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AF269088|ANKRD30B|374860|ankyrin repeat domain 30B##NM_001145029|ANKRD30B|374860|ankyrin repeat domain 30B##BC028407|ANKRD30B|374860|ankyrin repeat domain 30B##AB051559|GREB1L|80000|growth regulation by estrogen in breast cancer-like##NM_001142966|GREB1L|80000|growth regulation by estrogen in breast cancer-like##BC125017|GREB1L|80000|growth regulation by estrogen in breast cancer-like##AB067498|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##NM_052911|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##AK096746|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)	0.994035	CTCF.p2:-49:0.994
chr2	73587558	73587692	reg1019569.p1	6.910	+	AB463596 BC136252 BC143379 X60104 BC034462 TSC_hg19_v1_chr2_-_73520677 NM_001965 AK314154	-66985	-	AB075820 TSC_hg19_v1_chr2_-_73496671 NM_001080410	-90949	-	BC169255 TSC_hg19_v1_chr2_-_73492731	-94904	-	TSC_hg19_v1_chr2_+_73613119 AJ417593 AX751581 NM_015120	25433	+	AB019551 BC012626 AF187813 NM_003960	281889	-	AF185571 BC069564 BC121101 BC121102 NM_016347	340841	-	BC136252|EGR4|1961|early growth response 4##BC143379|EGR4|1961|early growth response 4##X60104|EGR4|1961|early growth response 4##BC034462|EGR4|1961|early growth response 4##NM_001965|EGR4|1961|early growth response 4##AK314154|EGR4|1961|early growth response 4##AB075820|FBXO41|150726|F-box protein 41##NM_001080410|FBXO41|150726|F-box protein 41##BC169255|FBXO41|150726|F-box protein 41##AJ417593|ALMS1|7840|Alstrom syndrome 1##AX751581|ALMS1|7840|Alstrom syndrome 1##NM_015120|ALMS1|7840|Alstrom syndrome 1##AB019551|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##BC012626|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##AF187813|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##NM_003960|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##AF185571|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC069564|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC121101|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC121102|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##NM_016347|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)	0.185154	
chr3	98078999	98079129	reg1020865.p1	6.910	+	NM_001005517	-6367	+	NM_001005482	-77333	+	BC137523 BC137524 NM_001005479	-95957	+	NM_001005516	30445	+	BC136918 BC136919 NM_001004736	109307	+	BC136724 BC136725 NM_001004737	137421	+	NM_001005517|OR5K4|403278|olfactory receptor, family 5, subfamily K, member 4##NM_001005482|OR5H2|79310|olfactory receptor, family 5, subfamily H, member 2##BC137523|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##BC137524|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##NM_001005479|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##NM_001005516|OR5K3|403277|olfactory receptor, family 5, subfamily K, member 3##BC136918|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1##BC136919|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1##NM_001004736|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1##BC136724|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2##BC136725|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2##NM_001004737|OR5K2|402135|olfactory receptor, family 5, subfamily K, member 2	0.560354	CTCF.p2:-13:0.560
chr7	131544052	131544160	reg1017504.p1	6.910	+	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	-302743	-	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-531467	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	-531500	+	TSC_hg19_v1_chr7_-_131833385 AL834504	289289	-	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	648814	-	AK123428 TSC_hg19_v1_chr7_-_132261230	717124	-	BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AL834504|PLXNA4|91584|plexin A4##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4##AK123428|PLXNA4|91584|plexin A4	0.998198	CTCF.p2:4:0.987
chr10	94051938	94052085	reg1019482.p1	6.909	+	TSC_hg19_v1_chr10_+_94050959 AK000452 AK309175 NM_017824 AK294799 BC015480 AB191202 AB529108	-957	+	TSC_hg19_v1_chr10_-_94050827 BC036444 AK302576 NM_014912	-1175	-	AB023157 NM_001178137 TSC_hg19_v1_chr10_-_94003035	-48992	-	AK302578 AK093287 AK316407 AX748033 NM_001165946	205482	-	TSC_hg19_v1_chr10_-_94333800 AB527891 AK312810 BC096336 BC096337 BC096338 BC096339 BC036188	281763	-	TSC_hg19_v1_chr10_-_94333845 M21188	281826	-	AK000452|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK309175|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##NM_017824|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK294799|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##BC015480|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AB191202|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##BC036444|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK302576|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_014912|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK302578|IDE|3416|insulin-degrading enzyme##AK093287|IDE|3416|insulin-degrading enzyme##AK316407|IDE|3416|insulin-degrading enzyme##NM_001165946|IDE|3416|insulin-degrading enzyme##AK312810|IDE|3416|insulin-degrading enzyme##BC096336|IDE|3416|insulin-degrading enzyme##BC096337|IDE|3416|insulin-degrading enzyme##BC096338|IDE|3416|insulin-degrading enzyme##BC096339|IDE|3416|insulin-degrading enzyme##BC036188|IDE|3416|insulin-degrading enzyme##M21188|IDE|3416|insulin-degrading enzyme	0.990548	CTCF.p2:13:0.991
chr16	71033796	71033908	reg1021034.p1	6.909	+	TSC_hg19_v1_chr16_-_70835074 AK056433	-198762	-	TSC_hg19_v1_chr16_-_70835062 AK307766	-198790	-	NM_018052 TSC_hg19_v1_chr16_-_70835060	-198792	-	AK022933 NM_032821 TSC_hg19_v1_chr16_-_71264588 NM_017558	230722	-	TSC_hg19_v1_chr16_-_71264605 BC028351 AK299016 AK299348 NM_001198542 NM_001198543	230762	-	AK000289 TSC_hg19_v1_chr16_-_71318858	284958	-	AK056433|VAC14|55697|Vac14 homolog (S. cerevisiae)##AK307766|VAC14|55697|Vac14 homolog (S. cerevisiae)##NM_018052|VAC14|55697|Vac14 homolog (S. cerevisiae)##AK022933|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_032821|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_017558|HYDIN|54768|hydrocephalus inducing homolog (mouse)##BC028351|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK299016|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK299348|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001198542|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001198543|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK000289|FTSJD1|55783|FtsJ methyltransferase domain containing 1	0.0	
chr9	125226125	125226259	reg1021016.p1	6.909	+	AK304403 TSC_hg19_v1_chr9_+_125137614	-88585	+	TSC_hg19_v1_chr9_+_125133330 AK290022 M59979 AB590429 DQ180740 DQ180741 DQ180742 S36219 S36271 S78220	-92850	+	NM_000962 NM_080591 TSC_hg19_v1_chr9_+_125133302 BC029840	-92921	+	NM_001004451 AB529234 BC136933 BC136938	14027	-	AB528201 NM_054107	46888	+	AB529305 NM_001004452 BC131606	55227	+	AK304403|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##AK290022|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##M59979|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##DQ180740|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##DQ180741|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##DQ180742|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##S36219|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##S36271|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##S78220|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##NM_000962|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##NM_080591|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##BC029840|PTGS1|5742|prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase)##NM_001004451|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1##BC136933|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1##BC136938|OR1J1|347168|olfactory receptor, family 1, subfamily J, member 1##NM_054107|OR1J2|26740|olfactory receptor, family 1, subfamily J, member 2##NM_001004452|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4##BC131606|OR1J4|26219|olfactory receptor, family 1, subfamily J, member 4	0.807485	CTCF.p2:0:0.807
chr3	45634756	45634865	reg1018739.p1	6.908	+	AK308146 BC025989 TSC_hg19_v1_chr3_+_45430067 D21851 NM_015340	-204746	+	TSC_hg19_v1_chr3_-_45267804 NM_015444	-366985	-	AB078417 AF438313 TSC_hg19_v1_chr3_-_45267780 BC057390	-367102	-	TSC_hg19_v1_chr3_+_45635397 M80651	775	+	TSC_hg19_v1_chr3_+_45636176 BC117236 BC117238 NM_014240 AJ132408 HQ258355	1461	+	CR749564 TSC_hg19_v1_chr3_+_45730767 NM_014016	95923	+	AK308146|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##BC025989|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##D21851|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015340|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##M80651|LIMD1|8994|LIM domains containing 1##BC117236|LIMD1|8994|LIM domains containing 1##BC117238|LIMD1|8994|LIM domains containing 1##NM_014240|LIMD1|8994|LIM domains containing 1##AJ132408|LIMD1|8994|LIM domains containing 1##HQ258355|LIMD1|8994|LIM domains containing 1##CR749564|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##NM_014016|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	0.0	
chr6	159050457	159050558	reg1019614.p1	6.908	+	BC033450 TSC_hg19_v1_chr6_+_158957752	-92805	+	AB037844 NM_020823	-93040	+	TSC_hg19_v1_chr6_+_158734935 AF087973	-315588	+	AB590427 CR456931 DQ892606 DQ892607 DQ895846 DQ895847 EU862237 U56255 TSC_hg19_v1_chr6_-_159065772 D50663 BC105588 BC029412 AK315601 NM_006519	15267	-	TSC_hg19_v1_chr6_+_159071070 NM_001009991 NM_001242384 NM_001242394 NM_001242395 AK092729 AK298712 AX747692 BC085612	20547	+	J05021 X51521 TSC_hg19_v1_chr6_-_159239246	188715	-	BC033450|TMEM181|57583|transmembrane protein 181##AB037844|TMEM181|57583|transmembrane protein 181##NM_020823|TMEM181|57583|transmembrane protein 181##CR456931|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892606|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892607|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895846|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895847|DYNLT1|6993|dynein, light chain, Tctex-type 1##EU862237|DYNLT1|6993|dynein, light chain, Tctex-type 1##U56255|DYNLT1|6993|dynein, light chain, Tctex-type 1##D50663|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC105588|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC029412|DYNLT1|6993|dynein, light chain, Tctex-type 1##AK315601|DYNLT1|6993|dynein, light chain, Tctex-type 1##NM_006519|DYNLT1|6993|dynein, light chain, Tctex-type 1##NM_001009991|SYTL3|94120|synaptotagmin-like 3##NM_001242384|SYTL3|94120|synaptotagmin-like 3##NM_001242394|SYTL3|94120|synaptotagmin-like 3##NM_001242395|SYTL3|94120|synaptotagmin-like 3##AK092729|SYTL3|94120|synaptotagmin-like 3##AK298712|SYTL3|94120|synaptotagmin-like 3##BC085612|SYTL3|94120|synaptotagmin-like 3##J05021|EZR|7430|ezrin##X51521|EZR|7430|ezrin	0.825121	CTCF.p2:-5:0.812
chr8	124778592	124778686	reg1019356.p1	6.908	+	CR541838 BC125158 AJ306450 Z11502 NM_001003954 NM_004306 AK290281 AK223374	-29020	-	AB196636 BC127886 NM_001081675	-113462	-	TSC_hg19_v1_chr8_-_124553499 NM_001242463 NM_058229	-225158	-	TSC_hg19_v1_chr8_+_124780681 AK300603 BC030520	2051	+	TSC_hg19_v1_chr8_+_124780758 DQ228141 NM_144963 BC144630	2174	+	AB196633 NM_001039112	85587	+	CR541838|ANXA13|312|annexin A13##BC125158|ANXA13|312|annexin A13##AJ306450|ANXA13|312|annexin A13##Z11502|ANXA13|312|annexin A13##NM_001003954|ANXA13|312|annexin A13##NM_004306|ANXA13|312|annexin A13##AK290281|ANXA13|312|annexin A13##AK223374|ANXA13|312|annexin A13##AB196636|KLHL38|340359|kelch-like 38 (Drosophila)##BC127886|KLHL38|340359|kelch-like 38 (Drosophila)##NM_001081675|KLHL38|340359|kelch-like 38 (Drosophila)##NM_001242463|FBXO32|114907|F-box protein 32##NM_058229|FBXO32|114907|F-box protein 32##AK300603|FAM91A1|157769|family with sequence similarity 91, member A1##BC030520|FAM91A1|157769|family with sequence similarity 91, member A1##DQ228141|FAM91A1|157769|family with sequence similarity 91, member A1##NM_144963|FAM91A1|157769|family with sequence similarity 91, member A1##BC144630|FAM91A1|157769|family with sequence similarity 91, member A1##AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)	0.246503	CTCF.p2:3:0.247
chr15	34533703	34533817	reg1019258.p1	6.907	+	TSC_hg19_v1_chr15_+_34517216 AK290524 AK075227 AK296184 BC016348 BC002583 AF151018 NM_016454 AY336092	-16520	+	BC037234 TSC_hg19_v1_chr15_-_34502298 AL833631 AK293695 AK311338 NM_024713	-31459	-	BC026234 AL136908 TSC_hg19_v1_chr15_-_34502237 AK293021 BC111000 AK297904	-31535	-	BC126241 BC126243 AF108831 TSC_hg19_v1_chr15_-_34610989 AK315283 NM_005135	77218	-	AF105366 AF531258 NM_001042497 NM_133647	95284	-	TSC_hg19_v1_chr15_-_34629950 BC033894 AF477977 AF531259 BC051744 DQ138323 NM_001042494 NM_001042496 BX648195	96203	-	AK290524|TMEM85|51234|transmembrane protein 85##AK075227|TMEM85|51234|transmembrane protein 85##BC016348|TMEM85|51234|transmembrane protein 85##BC002583|TMEM85|51234|transmembrane protein 85##AF151018|TMEM85|51234|transmembrane protein 85##NM_016454|TMEM85|51234|transmembrane protein 85##AY336092|TMEM85|51234|transmembrane protein 85##BC037234|C15orf29|79768|chromosome 15 open reading frame 29##AL833631|C15orf29|79768|chromosome 15 open reading frame 29##AK293695|C15orf29|79768|chromosome 15 open reading frame 29##AK311338|C15orf29|79768|chromosome 15 open reading frame 29##NM_024713|C15orf29|79768|chromosome 15 open reading frame 29##BC026234|C15orf29|79768|chromosome 15 open reading frame 29##AL136908|C15orf29|79768|chromosome 15 open reading frame 29##AK293021|C15orf29|79768|chromosome 15 open reading frame 29##BC111000|C15orf29|79768|chromosome 15 open reading frame 29##AK297904|C15orf29|79768|chromosome 15 open reading frame 29##BC126241|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##BC126243|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AF108831|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AK315283|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##NM_005135|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AF105366|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AF531258|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##NM_001042497|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##NM_133647|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##BC033894|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AF477977|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##AF531259|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##BC051744|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##DQ138323|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##NM_001042494|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##NM_001042496|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6##BX648195|SLC12A6|9990|solute carrier family 12 (potassium/chloride transporters), member 6	0.220785	CTCF.p2:4:0.221
chr2	132250274	132250454	reg1017684.p2	6.907	+	TSC_hg19_v1_chr2_-_132250072 NM_001085365	-303	-	BC063024 TSC_hg19_v1_chr2_-_132249961 BC018206	-408	-	NM_080386 AK093116 AX747933 AK292253 BC057810	-16728	+	AK304811 TSC_hg19_v1_chr2_+_132250648 AK293811 AK300337 AK303293 AK308371 BC093080	221	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	35142	+	AF038169 NM_013310	229699	+	NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A##BC063024|MZT2A|653784|mitotic spindle organizing protein 2A##BC018206|MZT2A|653784|mitotic spindle organizing protein 2A##NM_080386|TUBA3D|113457|tubulin, alpha 3d##AK093116|TUBA3D|113457|tubulin, alpha 3d##AK292253|TUBA3D|113457|tubulin, alpha 3d##BC057810|TUBA3D|113457|tubulin, alpha 3d##AK304811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK293811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK300337|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK303293|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK308371|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC093080|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A	0.86437	CTCF.p2:-21:0.864
chr4	86965278	86965411	reg1020641.p1	6.907	+	AL136646 NM_031305	-113919	+	AK307423 TSC_hg19_v1_chr4_+_86749064	-216290	+	BC098580 TSC_hg19_v1_chr4_+_86699865 AK098193	-265446	+	AK057723 NM_138981	63461	-	BC022492 TSC_hg19_v1_chr4_-_87281197 BC035057	315852	-	NM_138980 NM_138982	316030	-	AL136646|ARHGAP24|83478|Rho GTPase activating protein 24##NM_031305|ARHGAP24|83478|Rho GTPase activating protein 24##AK307423|ARHGAP24|83478|Rho GTPase activating protein 24##BC098580|ARHGAP24|83478|Rho GTPase activating protein 24##AK098193|ARHGAP24|83478|Rho GTPase activating protein 24##AK057723|MAPK10|5602|mitogen-activated protein kinase 10##NM_138981|MAPK10|5602|mitogen-activated protein kinase 10##BC022492|MAPK10|5602|mitogen-activated protein kinase 10##BC035057|MAPK10|5602|mitogen-activated protein kinase 10##NM_138980|MAPK10|5602|mitogen-activated protein kinase 10##NM_138982|MAPK10|5602|mitogen-activated protein kinase 10	0.999604	CTCF.p2:3:1.000
chr6	132016125	132016240	reg1021391.p1	6.907	+	AK024899 AK296080 AK310691 AK315893 NM_005021 AK292903 EF560735 AF005632 AB587329 DQ234347	-57700	+	AB385438 AF135022 AM393572 EU832308 EU832392 EU392526 EU392528 EU392529 EU392530 EU392531 AK315030 AF105332 EU392520 EU392522 EU392527 EU392532 BC060759 TSC_hg19_v1_chr6_-_131949372 AF104255 AL136776 AB033042 BC007088 NM_004830 NM_015979	-66895	-	NM_000045 NM_001244438 AY074488 BC005321 TSC_hg19_v1_chr6_+_131894365 M14502 BC020653 CU676606 AB590280 DQ892039 DQ895230 BT006741	-121800	+	BC120953 BC120954 NM_030908	6358	-	NM_001145659	15974	-	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	112979	+	AK024899|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK296080|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK310691|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK315893|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##NM_005021|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK292903|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##EF560735|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##DQ234347|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AF135022|MED23|9439|mediator complex subunit 23##AM393572|MED23|9439|mediator complex subunit 23##EU832308|MED23|9439|mediator complex subunit 23##EU832392|MED23|9439|mediator complex subunit 23##EU392526|MED23|9439|mediator complex subunit 23##EU392528|MED23|9439|mediator complex subunit 23##EU392529|MED23|9439|mediator complex subunit 23##EU392530|MED23|9439|mediator complex subunit 23##EU392531|MED23|9439|mediator complex subunit 23##AK315030|MED23|9439|mediator complex subunit 23##AF105332|MED23|9439|mediator complex subunit 23##EU392520|MED23|9439|mediator complex subunit 23##EU392522|MED23|9439|mediator complex subunit 23##EU392527|MED23|9439|mediator complex subunit 23##EU392532|MED23|9439|mediator complex subunit 23##BC060759|MED23|9439|mediator complex subunit 23##AF104255|MED23|9439|mediator complex subunit 23##AL136776|MED23|9439|mediator complex subunit 23##AB033042|MED23|9439|mediator complex subunit 23##BC007088|MED23|9439|mediator complex subunit 23##NM_004830|MED23|9439|mediator complex subunit 23##NM_015979|MED23|9439|mediator complex subunit 23##NM_000045|ARG1|383|arginase, liver##NM_001244438|ARG1|383|arginase, liver##AY074488|ARG1|383|arginase, liver##BC005321|ARG1|383|arginase, liver##M14502|ARG1|383|arginase, liver##BC020653|ARG1|383|arginase, liver##DQ892039|ARG1|383|arginase, liver##DQ895230|ARG1|383|arginase, liver##BT006741|ARG1|383|arginase, liver##BC120953|OR2A4|79541|olfactory receptor, family 2, subfamily A, member 4##BC120954|OR2A4|79541|olfactory receptor, family 2, subfamily A, member 4##NM_030908|OR2A4|79541|olfactory receptor, family 2, subfamily A, member 4##NM_001145659|CTAGE9|643854|CTAGE family, member 9##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1	0.507271	CTCF.p2:-12:0.507
chr9	12723804	12723898	reg1018680.p1	6.907	+	NM_000550 X51420 BC052608	-30426	+	BC028038 NM_002839	-2111129	-	TSC_hg19_v1_chr9_+_8858136 AK094342	-3865718	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	51165	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	51930	+	AB384682 AF093419 BC140793 BC144564 NM_003829	526487	-	NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##HQ257895|C9orf150|286343|chromosome 9 open reading frame 150##AF093419|MPDZ|8777|multiple PDZ domain protein##BC140793|MPDZ|8777|multiple PDZ domain protein##BC144564|MPDZ|8777|multiple PDZ domain protein##NM_003829|MPDZ|8777|multiple PDZ domain protein	0.990033	CTCF.p2:2:0.990
chr9	6306204	6306337	reg1000225.p2	6.907	+	NM_001199640 NM_001199641 NM_033439 AK295908 AK313414 TSC_hg19_v1_chr9_+_6215806 AK303943 BC047085	-90474	+	AF039023 AK300408 BC098406 TSC_hg19_v1_chr9_-_6015616 AK307840 BX537405 NM_001243202 NM_001243203 NM_012416	-290639	-	TSC_hg19_v1_chr9_-_6007953 NM_001017969	-298306	-	NM_001001874 NM_001001875 NM_033516 AK057479 AY032877 BC017589 BC042113 BC033792	22105	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	106874	+	TSC_hg19_v1_chr9_+_6413200 AK308433	106927	+	NM_001199640|IL33|90865|interleukin 33##NM_001199641|IL33|90865|interleukin 33##NM_033439|IL33|90865|interleukin 33##AK295908|IL33|90865|interleukin 33##AK313414|IL33|90865|interleukin 33##AK303943|IL33|90865|interleukin 33##BC047085|IL33|90865|interleukin 33##AF039023|RANBP6|26953|RAN binding protein 6##AK300408|RANBP6|26953|RAN binding protein 6##BC098406|RANBP6|26953|RAN binding protein 6##BX537405|RANBP6|26953|RAN binding protein 6##NM_001243202|RANBP6|26953|RAN binding protein 6##NM_001243203|RANBP6|26953|RAN binding protein 6##NM_012416|RANBP6|26953|RAN binding protein 6##NM_001017969|KIAA2026|158358|KIAA2026##NM_001001874|TPD52L3|89882|tumor protein D52-like 3##NM_001001875|TPD52L3|89882|tumor protein D52-like 3##NM_033516|TPD52L3|89882|tumor protein D52-like 3##AK057479|TPD52L3|89882|tumor protein D52-like 3##AY032877|TPD52L3|89882|tumor protein D52-like 3##BC017589|TPD52L3|89882|tumor protein D52-like 3##BC042113|TPD52L3|89882|tumor protein D52-like 3##BC033792|TPD52L3|89882|tumor protein D52-like 3##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK308433|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	0.0	
chr14	30912723	30912867	reg1023318.p1	6.906	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	-515941	-	TSC_hg19_v1_chr14_+_29241992 BX248251	-1670800	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-1675882	+	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	115565	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	178729	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	178749	+	AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1	0.977629	CTCF.p2:16:0.978
chr11	14930223	14930312	reg1014784.p3	6.905	+	AK054728 TSC_hg19_v1_chr11_+_14926557	-3718	+	AY323817 NM_024514 BC104907 BC104909	-16494	-	BC052580 BC111070 TSC_hg19_v1_chr11_-_14913218 AK312019 BC084557	-17033	-	M26095 X03662 M64486 BC093753 BC101599 BC143562 BC069684 BC069704 BC069760 BC069778 NM_001033952 NM_001033953 NM_001741 X00356	63553	-	BC008428 AK291188 BC092468 NM_000728	164859	+	AB236159 NM_001031853	203702	+	AK054728|CALCB|797|calcitonin-related polypeptide beta##AY323817|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##NM_024514|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104907|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104909|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC052580|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC111070|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##M26095|CALCA|796|calcitonin-related polypeptide alpha##X03662|CALCA|796|calcitonin-related polypeptide alpha##M64486|CALCA|796|calcitonin-related polypeptide alpha##BC093753|CALCA|796|calcitonin-related polypeptide alpha##BC101599|CALCA|796|calcitonin-related polypeptide alpha##BC143562|CALCA|796|calcitonin-related polypeptide alpha##BC069684|CALCA|796|calcitonin-related polypeptide alpha##BC069704|CALCA|796|calcitonin-related polypeptide alpha##BC069760|CALCA|796|calcitonin-related polypeptide alpha##BC069778|CALCA|796|calcitonin-related polypeptide alpha##NM_001033952|CALCA|796|calcitonin-related polypeptide alpha##NM_001033953|CALCA|796|calcitonin-related polypeptide alpha##NM_001741|CALCA|796|calcitonin-related polypeptide alpha##X00356|CALCA|796|calcitonin-related polypeptide alpha##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)	0.998088	CTCF.p2:4:0.998
chr16	68401034	68401151	reg1019126.p1	6.905	+	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	-56133	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	-56266	-	TSC_hg19_v1_chr16_+_68298430 NM_001076785 NM_003983 CR749291 CR749475 AK310866 BC028216	-102642	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	81389	-	TSC_hg19_v1_chr16_+_68564035 BC040871	162941	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	172106	+	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_001076785|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##NM_003983|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749291|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749475|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK310866|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC028216|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)	0.396551	CTCF.p2:0:0.200
chr13	97865137	97865288	reg1022937.p1	6.904	+	TSC_hg19_v1_chr13_+_97794087 CR749802	-71130	+	AK122639 NM_080818 AK313684	-218600	-	AF539426 NM_153456	-1122120	+	TSC_hg19_v1_chr13_+_97874586 AK074610 NM_144778 NM_207304 AK291727 AF061261 AF491866 BC032426 BC104038 BC104039 BC104040 AK315844	9383	+	TSC_hg19_v1_chr13_+_97874708 BC020418	9502	+	BC020430 TSC_hg19_v1_chr13_+_97928308	63040	+	CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK122639|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##NM_080818|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AK313684|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_144778|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_207304|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK291727|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF061261|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF491866|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC032426|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104038|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104039|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104040|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK315844|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC020418|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC020430|MBNL2|10150|muscleblind-like 2 (Drosophila)	0.499005	CTCF.p2:-6:0.499
chr20	34111287	34111400	reg1019695.p1	6.904	+	TSC_hg19_v1_chr20_+_34042987 AK307861 AB621828 AF049105 NM_007186	-68269	+	AB593125 U13660 NM_000557	-85353	-	TSC_hg19_v1_chr20_-_33999791 AK225281 AK293149 BC119013 BC122862 AY050659 NM_001184977 NM_018244 NM_199487	-111481	-	AK058089 AK310337 NM_001145350	6120	-	NM_015966 NM_198398 TSC_hg19_v1_chr20_+_34129827 AF308298 AF077030 AF151812 EF206690 BC014014	18459	+	AK074550 BC009765 TSC_hg19_v1_chr20_+_34129829 AK096484 AK300916	18487	+	AK307861|CEP250|11190|centrosomal protein 250kDa##AF049105|CEP250|11190|centrosomal protein 250kDa##NM_007186|CEP250|11190|centrosomal protein 250kDa##AB593125|GDF5|8200|growth differentiation factor 5##U13660|GDF5|8200|growth differentiation factor 5##NM_000557|GDF5|8200|growth differentiation factor 5##AK225281|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293149|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC119013|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC122862|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AY050659|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_001184977|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_018244|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_199487|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK058089|C20orf173|140873|chromosome 20 open reading frame 173##AK310337|C20orf173|140873|chromosome 20 open reading frame 173##NM_001145350|C20orf173|140873|chromosome 20 open reading frame 173##NM_015966|ERGIC3|51614|ERGIC and golgi 3##NM_198398|ERGIC3|51614|ERGIC and golgi 3##AF308298|ERGIC3|51614|ERGIC and golgi 3##AF077030|ERGIC3|51614|ERGIC and golgi 3##AF151812|ERGIC3|51614|ERGIC and golgi 3##EF206690|ERGIC3|51614|ERGIC and golgi 3##BC014014|ERGIC3|51614|ERGIC and golgi 3##AK074550|ERGIC3|51614|ERGIC and golgi 3##BC009765|ERGIC3|51614|ERGIC and golgi 3##AK096484|ERGIC3|51614|ERGIC and golgi 3##AK300916|ERGIC3|51614|ERGIC and golgi 3	0.0	
chr13	23981168	23981284	reg1020218.p2	6.903	+	TSC_hg19_v1_chr13_-_23949652 AK125458	-31576	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	-226111	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-1736078	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	26614	-	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	163229	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	172306	+	AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19	0.09312	
chr5	132165736	132165838	reg1019576.p1	6.903	+	BC104914 BC104916 BC143494 AF314142 NM_133456	-3855	-	TSC_hg19_v1_chr5_+_132149022 NM_175873	-16760	+	AF440763 NM_001098813 TSC_hg19_v1_chr5_-_132113705	-52200	-	DQ655971 TSC_hg19_v1_chr5_-_132166340 BC040980	517	-	AB075840 NM_001172700	802	-	NM_005260	34689	-	BC104914|SHROOM1|134549|shroom family member 1##BC104916|SHROOM1|134549|shroom family member 1##BC143494|SHROOM1|134549|shroom family member 1##AF314142|SHROOM1|134549|shroom family member 1##NM_133456|SHROOM1|134549|shroom family member 1##NM_175873|ANKRD43|134548|ankyrin repeat domain 43##AF440763|SEPT8|23176|septin 8##NM_001098813|SEPT8|23176|septin 8##AB075840|SHROOM1|134549|shroom family member 1##NM_001172700|SHROOM1|134549|shroom family member 1##NM_005260|GDF9|2661|growth differentiation factor 9	0.546396	CTCF.p2:34:0.528
chr9	134242321	134242442	reg1020150.p2	6.903	+	TSC_hg19_v1_chr9_+_134165108 AK075207 NM_032728 BC006362 AK027568 AK315502 AB385550	-77153	+	BC049388 NM_033387 AK095423	-90462	-	TSC_hg19_v1_chr9_+_134001016 D14689 AB159230	-241331	+	TSC_hg19_v1_chr9_+_134269515 BC002872	27185	+	NM_013318 TSC_hg19_v1_chr9_+_134305488	63101	+	CU678266 TSC_hg19_v1_chr9_+_134305548	63159	+	AK075207|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##NM_032728|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC006362|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK027568|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK315502|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC049388|FAM78A|286336|family with sequence similarity 78, member A##NM_033387|FAM78A|286336|family with sequence similarity 78, member A##AK095423|FAM78A|286336|family with sequence similarity 78, member A##D14689|NUP214|8021|nucleoporin 214kDa##AB159230|NUP214|8021|nucleoporin 214kDa##BC002872|PRRC2B|84726|proline-rich coiled-coil 2B##NM_013318|PRRC2B|84726|proline-rich coiled-coil 2B	0.315754	CTCF.p2:-2:0.316
chr20	35420951	35421065	reg1021067.p1	6.902	+	AK057056 TSC_hg19_v1_chr20_-_35407842	-13232	-	TSC_hg19_v1_chr20_-_35402167 BC035821 AK093031 AX747868 AK290738 NM_001145316 NM_024918 AK301671 AK301840 BC058899 AK023408 BC026011 NM_001145315 NM_001145317 NM_001145318	-18823	-	TSC_hg19_v1_chr20_-_35374542 NM_022477 NM_032013	-46456	-	TSC_hg19_v1_chr20_-_35444558 AK131491	23612	-	AK126630 NM_199181	67267	-	TSC_hg19_v1_chr20_-_35492072 NM_080627	71126	-	AK057056|KIAA0889|140710|KIAA0889##BC035821|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK093031|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK290738|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145316|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_024918|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301671|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301840|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC058899|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK023408|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC026011|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145315|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145317|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145318|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_022477|NDRG3|57446|NDRG family member 3##NM_032013|NDRG3|57446|NDRG family member 3##AK131491|KIAA0889|140710|KIAA0889##AK126630|KIAA0889|140710|KIAA0889##NM_199181|KIAA0889|140710|KIAA0889##NM_080627|KIAA0889|140710|KIAA0889	0.542142	CTCF.p2:-5:0.542
chr21	43584768	43584949	reg1001098.p2	6.902	+	AB096965 AY771619 AY771620 NM_001004416 NM_173568	-93433	+	AB051810 AB051811 NM_001199527 NM_001199528	-101791	+	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	-154387	-	AF323660 NM_207627 AF323661 NM_207628	35001	+	AF323662 NM_207629	51328	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	54435	+	AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323662|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207629|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	0.0	
chr3	46249647	46249827	reg1008884.p1	6.902	+	AB189434 AB189435 NM_001024644 NM_005283	-180759	-	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	-212416	-	NM_006564 Y13248	-264765	+	BC064991 TSC_hg19_v1_chr3_-_46249804 L10918 BC051306 NM_001295	72	-	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	34179	+	AK292685 NM_001123041 NM_001123396	145492	+	AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##BC064991|CCR1|1230|chemokine (C-C motif) receptor 1##L10918|CCR1|1230|chemokine (C-C motif) receptor 1##BC051306|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001295|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2	0.019932	
chr4	132565906	132566051	reg1022619.p1	6.902	+	NM_001099783	-2548697	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-2551111	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-2551388	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	1504478	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	1507305	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	2556940	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.234572	CTCF.p2:-5:0.235
chr8	131530589	131530698	reg1020115.p2	6.902	+	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	-74612	-	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-501760	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-501949	-	NM_001115	522191	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1385714	+	TSC_hg19_v1_chr8_+_132916379 BC108667	1385734	+	NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC108667|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.981602	CTCF.p2:9:0.982
chr12	14518284	14518413	reg1021453.p1	6.901	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-385362	-	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-1168619	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-1168631	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	287	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	19924	+	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	202261	-	BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1	0.0	
chr2	101822126	101822238	reg1019941.p2	6.900	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	-54399	-	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	-203460	+	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	-385416	+	TSC_hg19_v1_chr2_+_101869347 NM_017546	47155	+	TSC_hg19_v1_chr2_+_101869378 AF103798 BC064421 BC018664	47210	+	AM392566 AB463234 TSC_hg19_v1_chr2_-_101925153 BC019355 BC032328 AK074985 AK075141 AY450390 BC045743 AK129799 NM_173647	102960	-	AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_017546|C2orf29|55571|chromosome 2 open reading frame 29##AF103798|C2orf29|55571|chromosome 2 open reading frame 29##BC064421|C2orf29|55571|chromosome 2 open reading frame 29##BC018664|C2orf29|55571|chromosome 2 open reading frame 29##AM392566|RNF149|284996|ring finger protein 149##BC019355|RNF149|284996|ring finger protein 149##BC032328|RNF149|284996|ring finger protein 149##AK074985|RNF149|284996|ring finger protein 149##AK075141|RNF149|284996|ring finger protein 149##AY450390|RNF149|284996|ring finger protein 149##BC045743|RNF149|284996|ring finger protein 149##AK129799|RNF149|284996|ring finger protein 149##NM_173647|RNF149|284996|ring finger protein 149	0.909303	CTCF.p2:12:0.909
chr3	23001970	23002107	reg1021031.p1	6.900	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-587904	-	AK026072 NM_024697	-1209223	-	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-2774364	-	TSC_hg19_v1_chr3_+_23244600 AK307075	242545	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	242717	+	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	845372	+	AK310298|ZNF385D|79750|zinc finger protein 385D##AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.302348	CTCF.p2:10:0.302
chr9	124138635	124138764	reg1021470.p1	6.900	+	BC010703 TSC_hg19_v1_chr9_-_124132529 AK307999 AK304449 AK304518 AK302977 NM_004099 NM_198194	-6157	-	CR542100 X60067 AB528375 DQ891058 DQ894236 CU679799 TSC_hg19_v1_chr9_-_124132480 M81635	-6224	-	BC017491 TSC_hg19_v1_chr9_+_124086860	-51827	+	AF378121 AF378122 AF378123 TSC_hg19_v1_chr9_-_124262101 BC045756	123390	-	NM_032552	190699	+	TSC_hg19_v1_chr9_+_124461442 AF367051	322807	+	BC010703|STOM|2040|stomatin##AK307999|STOM|2040|stomatin##AK304449|STOM|2040|stomatin##AK304518|STOM|2040|stomatin##AK302977|STOM|2040|stomatin##NM_004099|STOM|2040|stomatin##NM_198194|STOM|2040|stomatin##CR542100|STOM|2040|stomatin##X60067|STOM|2040|stomatin##DQ891058|STOM|2040|stomatin##DQ894236|STOM|2040|stomatin##M81635|STOM|2040|stomatin##BC017491|GSN|2934|gelsolin##AF378121|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378122|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378123|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC045756|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##NM_032552|DAB2IP|153090|DAB2 interacting protein##AF367051|DAB2IP|153090|DAB2 interacting protein	0.155476	
chr9	36008863	36009039	reg1020344.p1	6.900	+	HQ258184 BC104869 BC113651 NM_019897	-50829	-	AY358408 NM_001039792	-102763	+	AY726589 NM_001004487 BC136715 BC136716	-138563	-	TSC_hg19_v1_chr9_+_36036901 AK292653 NM_021111 AK315073 BC050306 BC032240 BC060806 BC137093 CU687432	27996	+	TSC_hg19_v1_chr9_+_36136731 AK074488 BC017918 AK075091 AK298741 AK307243 CR749781 AY039756 NM_022343	127781	+	AK313763 NM_005893 AF333334 BC019251 DQ890826 DQ893980 DQ893982 EU176505 Z46967	160495	+	HQ258184|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC104869|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC113651|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##NM_019897|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##AY358408|HRCT1|646962|histidine rich carboxyl terminus 1##NM_001039792|HRCT1|646962|histidine rich carboxyl terminus 1##AY726589|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##NM_001004487|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136715|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136716|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK074488|GLIPR2|152007|GLI pathogenesis-related 2##BC017918|GLIPR2|152007|GLI pathogenesis-related 2##AK075091|GLIPR2|152007|GLI pathogenesis-related 2##AK298741|GLIPR2|152007|GLI pathogenesis-related 2##AK307243|GLIPR2|152007|GLI pathogenesis-related 2##CR749781|GLIPR2|152007|GLI pathogenesis-related 2##AY039756|GLIPR2|152007|GLI pathogenesis-related 2##NM_022343|GLIPR2|152007|GLI pathogenesis-related 2##AK313763|CCIN|881|calicin##NM_005893|CCIN|881|calicin##AF333334|CCIN|881|calicin##BC019251|CCIN|881|calicin##DQ890826|CCIN|881|calicin##DQ893980|CCIN|881|calicin##DQ893982|CCIN|881|calicin##EU176505|CCIN|881|calicin##Z46967|CCIN|881|calicin	0.981692	CTCF.p2:-22:0.971
chrX	132306091	132306244	reg1019620.p1	6.900	+	BC101189 BC101190 BC101191 BC101192 BC069073 AF285593 NM_031907	-143869	-	AK056706 NM_001077188 NM_147175	-210745	-	AK075402 TSC_hg19_v1_chrX_-_132092281 BC094718	-213911	-	EU446842 BC074762 BC117336 BC126361 AB464736 AF219119 NM_016521	46073	-	AB528412 CU677845 DQ891809 DQ894992 AF064826 AY052833 AF030186 NM_001448 TSC_hg19_v1_chrX_-_132549316	243007	-	TSC_hg19_v1_chrX_-_132549514 AK312605 AY358507 BC017166	243301	-	BC101189|USP26|83844|ubiquitin specific peptidase 26##BC101190|USP26|83844|ubiquitin specific peptidase 26##BC101191|USP26|83844|ubiquitin specific peptidase 26##BC101192|USP26|83844|ubiquitin specific peptidase 26##BC069073|USP26|83844|ubiquitin specific peptidase 26##AF285593|USP26|83844|ubiquitin specific peptidase 26##NM_031907|USP26|83844|ubiquitin specific peptidase 26##AK056706|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_001077188|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_147175|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##EU446842|TFDP3|51270|transcription factor Dp family, member 3##BC074762|TFDP3|51270|transcription factor Dp family, member 3##BC117336|TFDP3|51270|transcription factor Dp family, member 3##BC126361|TFDP3|51270|transcription factor Dp family, member 3##AF219119|TFDP3|51270|transcription factor Dp family, member 3##NM_016521|TFDP3|51270|transcription factor Dp family, member 3##DQ891809|GPC4|2239|glypican 4##DQ894992|GPC4|2239|glypican 4##AF064826|GPC4|2239|glypican 4##AY052833|GPC4|2239|glypican 4##AF030186|GPC4|2239|glypican 4##NM_001448|GPC4|2239|glypican 4##AK312605|GPC4|2239|glypican 4##AY358507|GPC4|2239|glypican 4##BC017166|GPC4|2239|glypican 4	0.128061	
chr1	154506859	154506978	reg1020494.p2	6.899	+	BC044864 NM_001098475 NM_182499	-32224	+	BC143765 BC117210 NM_001010846	-32394	-	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	-128844	+	BC107057 AY112698 TSC_hg19_v1_chr1_-_154531132 AY948200 NM_017582	24191	-	TSC_hg19_v1_chr1_+_154540253 NM_000748 U62437	33335	+	TSC_hg19_v1_chr1_+_154540307 X53179 AK313470 BC075040 BC075041 Y08415	33492	+	BC044864|TDRD10|126668|tudor domain containing 10##NM_001098475|TDRD10|126668|tudor domain containing 10##NM_182499|TDRD10|126668|tudor domain containing 10##BC143765|SHE|126669|Src homology 2 domain containing E##BC117210|SHE|126669|Src homology 2 domain containing E##NM_001010846|SHE|126669|Src homology 2 domain containing E##AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor##BC107057|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY112698|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY948200|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##NM_017582|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##NM_000748|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##U62437|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##X53179|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##AK313470|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##BC075040|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##BC075041|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)##Y08415|CHRNB2|1141|cholinergic receptor, nicotinic, beta 2 (neuronal)	0.980077	CTCF.p2:-2:0.926
chr5	103165407	103165522	reg1021972.p1	6.899	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-266983	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-571007	+	BC024591 NM_015216 AB463068	-700190	+	AK308672 NM_001962 U26403	3841126	-	TSC_hg19_v1_chr5_-_107717106 AK126722	4551666	-	BC063316 NM_001163315	4552334	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.913482	CTCF.p2:9:0.913
chr6	116433215	116433344	reg1022448.p1	6.899	+	AK097758 TSC_hg19_v1_chr6_-_116422450	-10849	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	-11270	+	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	-51397	-	BC130621 BC130623 NM_000493	13981	-	AB385375 BC040453 TSC_hg19_v1_chr6_-_116575239 AB018264 NM_021648 AK302542 AK091559	141956	-	AK026849 TSC_hg19_v1_chr6_-_116600165	166871	-	NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##BC130621|COL10A1|1300|collagen, type X, alpha 1##BC130623|COL10A1|1300|collagen, type X, alpha 1##NM_000493|COL10A1|1300|collagen, type X, alpha 1##BC040453|TSPYL4|23270|TSPY-like 4##AB018264|TSPYL4|23270|TSPY-like 4##NM_021648|TSPYL4|23270|TSPY-like 4##AK302542|TSPYL4|23270|TSPY-like 4##AK091559|TSPYL4|23270|TSPY-like 4##AK026849|TSPYL1|7259|TSPY-like 1	0.638955	CTCF.p2:-5:0.579
chrX	150918375	150918532	reg1016891.p1	6.899	+	AK128186 NM_005140 BC126302 BC126304	-15171	+	BC022064 AF249872 NM_033085 AK057369 AB528542 AM393498 CU692478 DQ892418 DQ895632	-33905	+	NM_024082	-54724	+	NM_001011548	162907	+	NM_002362	166255	+	NM_001011549 AK300179	166949	+	AK128186|CNGA2|1260|cyclic nucleotide gated channel alpha 2##NM_005140|CNGA2|1260|cyclic nucleotide gated channel alpha 2##BC126302|CNGA2|1260|cyclic nucleotide gated channel alpha 2##BC126304|CNGA2|1260|cyclic nucleotide gated channel alpha 2##BC022064|FATE1|89885|fetal and adult testis expressed 1##AF249872|FATE1|89885|fetal and adult testis expressed 1##NM_033085|FATE1|89885|fetal and adult testis expressed 1##AM393498|FATE1|89885|fetal and adult testis expressed 1##DQ892418|FATE1|89885|fetal and adult testis expressed 1##DQ895632|FATE1|89885|fetal and adult testis expressed 1##NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)##NM_001011548|MAGEA4|4103|melanoma antigen family A, 4##NM_002362|MAGEA4|4103|melanoma antigen family A, 4##NM_001011549|MAGEA4|4103|melanoma antigen family A, 4##AK300179|MAGEA4|4103|melanoma antigen family A, 4	0.977226	CTCF.p2:-27:0.977
chr10	106166619	106166720	reg1019795.p2	6.898	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-53128	+	AB051541 TSC_hg19_v1_chr10_-_106098200 AK129877	-68480	-	BC070108 NM_033397	-73007	-	AB028982 NM_014978	234189	+	BC117417 TSC_hg19_v1_chr10_+_106401047	234376	+	TSC_hg19_v1_chr10_-_108459000 AK123752	2292390	-	BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AB051541|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##BC070108|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##NM_033397|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	0.739828	CTCF.p2:-4:0.644
chr13	103556117	103556297	reg1020301.p2	6.898	+	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-57721	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-57953	+	TSC_hg19_v1_chr13_+_103498240 NM_000123 BC031522 AF462447	-57998	+	NM_000452 U10417	162988	-	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	2562097	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	2562384	+	BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000123|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##BC031522|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AF462447|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator	0.0	
chr13	28534530	28534637	reg1022690.p1	6.898	+	TSC_hg19_v1_chr13_+_28494136 NM_000209 X99894 U30329 U35632 AB464648	-40379	+	AB044157 NM_145657 AB463700	-167782	+	AK000623 TSC_hg19_v1_chr13_+_28196032 AB464657 AB527907 CU677257	-338509	+	CU677005 AB463470 DQ893626 EU176674 U51096 TSC_hg19_v1_chr13_-_28543282	8629	-	TSC_hg19_v1_chr13_-_28543325 BC014461 NM_001265	8725	-	TSC_hg19_v1_chr13_-_28543453 Y13709	8880	-	NM_000209|PDX1|3651|pancreatic and duodenal homeobox 1##X99894|PDX1|3651|pancreatic and duodenal homeobox 1##U30329|PDX1|3651|pancreatic and duodenal homeobox 1##U35632|PDX1|3651|pancreatic and duodenal homeobox 1##AB044157|GSX1|219409|GS homeobox 1##NM_145657|GSX1|219409|GS homeobox 1##AK000623|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##DQ893626|CDX2|1045|caudal type homeobox 2##EU176674|CDX2|1045|caudal type homeobox 2##U51096|CDX2|1045|caudal type homeobox 2##BC014461|CDX2|1045|caudal type homeobox 2##NM_001265|CDX2|1045|caudal type homeobox 2##Y13709|CDX2|1045|caudal type homeobox 2	0.107388	
chr6_qbl_hap6	4545361	4545488	reg1024009.p1	6.898	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.028597	
chr8	101586341	101586452	reg1019147.p1	6.898	+	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	-14456	-	TSC_hg19_v1_chr8_-_101322306 NM_183419	-264111	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-264215	-	AK093906 AX748361 NM_152628	75496	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	147410	-	AK095194 AK298990 TSC_hg19_v1_chr8_-_101734267	147825	-	BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK095194|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK298990|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.041185	
chr9	135924058	135924170	reg1020976.p2	6.898	+	TSC_hg19_v1_chr9_+_135906386 AK000194 AK097295 AK293980 BC006409 AY007123 DQ892071 DQ895265 AJ420443 BC030157	-17726	+	NM_001122823 NM_012087 TSC_hg19_v1_chr9_+_135906094 AK225761 AK311481 AK055092 AF133124 BC011355 BC017337	-18015	+	TSC_hg19_v1_chr9_+_135894809 BC070500	-29307	+	NM_001807 S79774 M85201 BC042510 AK299965	13261	+	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	72385	-	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	100572	-	AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_001122823|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_012087|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK225761|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK311481|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK055092|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF133124|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC011355|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC017337|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator	0.915783	CTCF.p2:-11:0.916
chr12	96526749	96526841	reg1016719.p1	6.897	+	AK301308 TSC_hg19_v1_chr12_-_96429399 AK310522 AK293630	-97380	-	CR457068 AB590523 AB209740 J02959 TSC_hg19_v1_chr12_-_96429366 BC032528 J03459 NM_000895 AK308184	-97462	-	BC096096 BC096097 BC096098 BC096099 D16626 AK303544 NM_002108 AK298736 AK297004 TSC_hg19_v1_chr12_-_96390137	-136721	-	TSC_hg19_v1_chr12_+_96588154 NM_005230 Z36715 AK312694	61331	+	TSC_hg19_v1_chr12_+_96588254 BC017371	61472	+	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	267188	-	AK301308|LTA4H|4048|leukotriene A4 hydrolase##AK293630|LTA4H|4048|leukotriene A4 hydrolase##CR457068|LTA4H|4048|leukotriene A4 hydrolase##AB209740|LTA4H|4048|leukotriene A4 hydrolase##J02959|LTA4H|4048|leukotriene A4 hydrolase##BC032528|LTA4H|4048|leukotriene A4 hydrolase##J03459|LTA4H|4048|leukotriene A4 hydrolase##NM_000895|LTA4H|4048|leukotriene A4 hydrolase##AK308184|LTA4H|4048|leukotriene A4 hydrolase##BC096096|HAL|3034|histidine ammonia-lyase##BC096097|HAL|3034|histidine ammonia-lyase##BC096098|HAL|3034|histidine ammonia-lyase##BC096099|HAL|3034|histidine ammonia-lyase##D16626|HAL|3034|histidine ammonia-lyase##AK303544|HAL|3034|histidine ammonia-lyase##NM_002108|HAL|3034|histidine ammonia-lyase##AK298736|HAL|3034|histidine ammonia-lyase##AK297004|HAL|3034|histidine ammonia-lyase##NM_005230|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##Z36715|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK312694|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17	1.119981	CTCF.p2:1:0.562	CTCF.p2:-18:0.558
chr18	49936222	49936359	reg1022982.p1	6.897	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-69177	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-69749	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-1212250	-	TSC_hg19_v1_chr18_-_51690988 AL110266	1754702	-	AF072246 TSC_hg19_v1_chr18_-_51750614	1814247	-	TSC_hg19_v1_chr18_-_51750997 BC032638	1814675	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	0.97325	CTCF.p2:26:0.973
chr6	84221659	84221776	reg1022113.p1	6.897	+	TSC_hg19_v1_chr6_-_84140899 NM_002395	-80813	-	TSC_hg19_v1_chr6_-_84140767 AK223417 AK301875 AK289783 AK302777	-80926	-	TSC_hg19_v1_chr6_-_84140744 BC025246	-80969	-	NM_001170423 NM_153362 TSC_hg19_v1_chr6_+_84222226	493	+	TSC_hg19_v1_chr6_+_84222252 AY358661 BC037170 AK291928	563	+	TSC_hg19_v1_chr6_-_84418505 AK294898	196782	-	NM_002395|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK223417|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK301875|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK289783|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK302777|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##BC025246|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##NM_001170423|PRSS35|167681|protease, serine, 35##NM_153362|PRSS35|167681|protease, serine, 35##AY358661|PRSS35|167681|protease, serine, 35##BC037170|PRSS35|167681|protease, serine, 35##AK291928|PRSS35|167681|protease, serine, 35##AK294898|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)	0.796638	CTCF.p2:0:0.797
chr4	123499105	123499222	reg1020873.p2	6.896	+	AF532913 AY283686 AY523040 DQ231169 S77835 AB451325 AB451454 AB591003 CU688118 DQ861285 AF228636 BC066254 BC066255 BC066256 BC066257 BC070338 S77834 U25676 V00564 NM_000586 X01586	-121577	-	NM_001159285 NM_001159295 BC040229 AK093297 AX748040	-198531	+	NM_139243 AK057303	-199020	+	CU688120 CU688122 DQ645417 BC069124 BC066258 BC066259 BC066260 BC066261 BC066262 NM_001207006 NM_021803 AF254069	43025	-	AK123553 NM_001178007 NM_152618 BC055426 TSC_hg19_v1_chr4_+_123653916 BX538148	154742	+	TSC_hg19_v1_chr4_+_123747833 J04513 NM_002006 BC111737 BC118573 BC118654	248681	+	AF532913|IL2|3558|interleukin 2##AY283686|IL2|3558|interleukin 2##AY523040|IL2|3558|interleukin 2##DQ231169|IL2|3558|interleukin 2##S77835|IL2|3558|interleukin 2##AB451325|IL2|3558|interleukin 2##AB451454|IL2|3558|interleukin 2##DQ861285|IL2|3558|interleukin 2##AF228636|IL2|3558|interleukin 2##BC066254|IL2|3558|interleukin 2##BC066255|IL2|3558|interleukin 2##BC066256|IL2|3558|interleukin 2##BC066257|IL2|3558|interleukin 2##BC070338|IL2|3558|interleukin 2##S77834|IL2|3558|interleukin 2##U25676|IL2|3558|interleukin 2##V00564|IL2|3558|interleukin 2##NM_000586|IL2|3558|interleukin 2##X01586|IL2|3558|interleukin 2##NM_001159285|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##NM_001159295|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##BC040229|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK093297|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##NM_139243|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK057303|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##DQ645417|IL21|59067|interleukin 21##BC069124|IL21|59067|interleukin 21##BC066258|IL21|59067|interleukin 21##BC066259|IL21|59067|interleukin 21##BC066260|IL21|59067|interleukin 21##BC066261|IL21|59067|interleukin 21##BC066262|IL21|59067|interleukin 21##NM_001207006|IL21|59067|interleukin 21##NM_021803|IL21|59067|interleukin 21##AF254069|IL21|59067|interleukin 21##AK123553|BBS12|166379|Bardet-Biedl syndrome 12##NM_001178007|BBS12|166379|Bardet-Biedl syndrome 12##NM_152618|BBS12|166379|Bardet-Biedl syndrome 12##BC055426|BBS12|166379|Bardet-Biedl syndrome 12##BX538148|BBS12|166379|Bardet-Biedl syndrome 12##J04513|FGF2|2247|fibroblast growth factor 2 (basic)##NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)##BC111737|FGF2|2247|fibroblast growth factor 2 (basic)	0.018248	
chr13	42615953	42616133	reg1020549.p2	6.895	+	AK289546 NM_001204504	-1872	+	TSC_hg19_v1_chr13_-_42535247 AB590583 BC131802 BC053674 NM_001009814 NM_015058	-80854	-	TSC_hg19_v1_chr13_-_42535066 AK095155	-80963	-	NM_152910 NM_178009 AB078967 AB078968	6822	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	96167	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	230242	+	AK289546|DGKH|160851|diacylglycerol kinase, eta##NM_001204504|DGKH|160851|diacylglycerol kinase, eta##BC131802|KIAA0564|23078|KIAA0564##BC053674|KIAA0564|23078|KIAA0564##NM_001009814|KIAA0564|23078|KIAA0564##NM_015058|KIAA0564|23078|KIAA0564##AK095155|KIAA0564|23078|KIAA0564##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11	0.0	
chr6	9540892	9541036	reg1021362.p2	6.895	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-1105076	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-1105256	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-1438174	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	871652	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	874311	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	874504	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.996435	CTCF.p2:-19:0.966
chr8	28588340	28588462	reg1019652.p1	6.895	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	-29251	+	TSC_hg19_v1_chr8_+_28559032 AB011091	-29326	+	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	-236636	+	TSC_hg19_v1_chr8_-_28747454 BC016687 AK225072 AK304525 AK298468 NM_001172562 BC025267 AK300593 AK295977 AK001733 AK225530	159059	-	NM_001145159 NM_018250	159296	-	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	159516	+	AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3##AB011091|EXTL3|2137|exostoses (multiple)-like 3##NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##BC016687|INTS9|55756|integrator complex subunit 9##AK225072|INTS9|55756|integrator complex subunit 9##AK304525|INTS9|55756|integrator complex subunit 9##AK298468|INTS9|55756|integrator complex subunit 9##NM_001172562|INTS9|55756|integrator complex subunit 9##BC025267|INTS9|55756|integrator complex subunit 9##AK300593|INTS9|55756|integrator complex subunit 9##AK295977|INTS9|55756|integrator complex subunit 9##AK001733|INTS9|55756|integrator complex subunit 9##AK225530|INTS9|55756|integrator complex subunit 9##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1	0.793073	CTCF.p2:19:0.793
chr10	61860060	61860182	reg1019205.p2	6.894	+	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-193797	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	-193920	-	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-390397	-	AK292927 AK092527 NM_001149	40595	-	U13616 NM_020987	289439	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	472569	-	BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##S72869|CCDC6|8030|coiled-coil domain containing 6##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.986896	CTCF.p2:-17:0.987
chr15	40397101	40397231	reg1019750.p1	6.894	+	TSC_hg19_v1_chr15_+_40331506 AK127696	-65688	+	AB451391 CU690086 TSC_hg19_v1_chr15_-_40331370 X73459 BC071716 U07857 BC100031 BC035495 BC051006 AB061546 NM_003134	-65814	-	TSC_hg19_v1_chr15_+_40294764 AK074361	-102370	+	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	1120	-	BC104983 BC104985 BC069328 BC069505 NM_033503 AK024472	1444	-	TSC_hg19_v1_chr15_-_40401076 BC060783 BC070043 NM_001003940	3929	-	AK127696|LOC100131089|100131089|uncharacterized LOC100131089##AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AK074361|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor##BC104983|BMF|90427|Bcl2 modifying factor##BC104985|BMF|90427|Bcl2 modifying factor##BC069328|BMF|90427|Bcl2 modifying factor##BC069505|BMF|90427|Bcl2 modifying factor##NM_033503|BMF|90427|Bcl2 modifying factor##AK024472|BMF|90427|Bcl2 modifying factor##BC060783|BMF|90427|Bcl2 modifying factor##BC070043|BMF|90427|Bcl2 modifying factor##NM_001003940|BMF|90427|Bcl2 modifying factor	0.0	
chr18	44530155	44530322	reg1021458.p2	6.894	+	BC034999 NM_031303	-3452	+	TSC_hg19_v1_chr18_+_44497558 AK309134	-32681	+	AB527541 AF077953 AF077954 DQ896421 EU176432 TSC_hg19_v1_chr18_-_44497471 AK308143 BC111060 BC015190 AK294801 NM_004671 NM_173206	-32825	-	BC103912 AB464734 BC103913 EU446606 NM_001100817	14130	-	NM_001242907	14368	-	BC103912 AB076840 AB464734 BC103913 EU446606 NM_001100817	20057	-	BC034999|KATNAL2|83473|katanin p60 subunit A-like 2##NM_031303|KATNAL2|83473|katanin p60 subunit A-like 2##AK309134|KATNAL2|83473|katanin p60 subunit A-like 2##AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2##AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2##DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2##EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2##AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2##BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2##BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2##AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2##NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2##NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2##BC103912|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##BC103913|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##EU446606|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##NM_001100817|TCEB3CL|728929|transcription elongation factor B polypeptide 3C-like##NM_001242907|LOC100506888|100506888|transcription elongation factor B polypeptide 3C-like##BC103912|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##AB076840|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##BC103913|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##EU446606|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##NM_001100817|TCEB3CL|728929|transcription elongation factor B polypeptide 3C-like	0.338614	CTCF.p2:-25:0.339
chr5	76011441	76011615	reg1015182.p1	6.894	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	-92383	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	-312412	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-632257	+	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	428	+	NM_005242 BC018130 TSC_hg19_v1_chr5_+_76114854 U34038	103324	+	TSC_hg19_v1_chr5_+_76114883 BC012453 AY336105 BT009856 CU676194 CU680330 DQ890966 DQ894139	103416	+	BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor##NM_005242|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC018130|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##U34038|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC012453|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##AY336105|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BT009856|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ890966|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ894139|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1	0.0	
chr6	43971286	43971385	reg1019386.p3	6.894	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	-2961	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-232465	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-232801	+	CR627460 TSC_hg19_v1_chr6_+_44094741	123363	+	TSC_hg19_v1_chr6_-_44095161 AK312086	123825	-	TSC_hg19_v1_chr6_-_44095190 NM_032111	123863	-	BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14##NM_032111|MRPL14|64928|mitochondrial ribosomal protein L14	0.015133	
chr6_cox_hap2	4114042	4114146	reg1017235.p1	6.894	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.575388	CTCF.p2:24:0.575
chr1	14256799	14256909	reg1021531.p1	6.893	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-180913	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-180931	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-180969	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	668340	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	993865	+	AY505121 NM_001018001	999441	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.999098	CTCF.p2:1:0.999
chr13	81745328	81745472	reg1020203.p1	6.893	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-830336	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-832358	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-1689845	+	TSC_hg19_v1_chr13_-_84456424 BC051738	2711025	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	2711100	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	4628039	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.996621	CTCF.p2:-24:0.997
chr19	11811084	11811216	reg1019837.p1	6.893	+	NM_145295 BC098416 AK095639 BC006279 AK074846 BC069232	-102859	+	BC111014 TSC_hg19_v1_chr19_-_11689776 AK307164 NM_001111035 NM_001111036	-121368	-	AK225912 NM_001111034	-121559	-	X51760 BC052597 AK308189 NM_001080493 AK300579 AK303213	38608	-	NM_152355 TSC_hg19_v1_chr19_+_11877884 AK095956	66710	+	AK297479 NM_152356 AK096593	98229	+	NM_145295|ZNF627|199692|zinc finger protein 627##BC098416|ZNF627|199692|zinc finger protein 627##AK095639|ZNF627|199692|zinc finger protein 627##BC006279|ZNF627|199692|zinc finger protein 627##AK074846|ZNF627|199692|zinc finger protein 627##BC069232|ZNF627|199692|zinc finger protein 627##BC111014|ACP5|54|acid phosphatase 5, tartrate resistant##AK307164|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111035|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111036|ACP5|54|acid phosphatase 5, tartrate resistant##AK225912|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111034|ACP5|54|acid phosphatase 5, tartrate resistant##X51760|ZNF823|55552|zinc finger protein 823##BC052597|ZNF823|55552|zinc finger protein 823##AK308189|ZNF823|55552|zinc finger protein 823##NM_001080493|ZNF823|55552|zinc finger protein 823##AK300579|ZNF823|55552|zinc finger protein 823##AK303213|ZNF823|55552|zinc finger protein 823##NM_152355|ZNF441|126068|zinc finger protein 441##AK095956|ZNF441|126068|zinc finger protein 441##AK297479|ZNF491|126069|zinc finger protein 491##NM_152356|ZNF491|126069|zinc finger protein 491##AK096593|ZNF491|126069|zinc finger protein 491	0.808355	CTCF.p2:22:0.796
chr12	99349199	99349333	reg1023323.p1	6.892	+	AY356353 AK315954 AM980945 AK294994 TSC_hg19_v1_chr12_-_99288638 AK295988 NM_001204065 NM_001204079 NM_001204080 NM_001204081	-60679	-	AK307509 TSC_hg19_v1_chr12_+_99039067 AF013263 NM_001160 NM_013229 NM_181861 NM_181868 NM_181869	-310269	+	TSC_hg19_v1_chr12_-_99038755 AK123069	-310461	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	199291	-	AK294191 NM_001204067	199601	-	NM_153364 AK312767 BC031221	692264	+	AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK307509|APAF1|317|apoptotic peptidase activating factor 1##AF013263|APAF1|317|apoptotic peptidase activating factor 1##NM_001160|APAF1|317|apoptotic peptidase activating factor 1##NM_013229|APAF1|317|apoptotic peptidase activating factor 1##NM_181861|APAF1|317|apoptotic peptidase activating factor 1##NM_181868|APAF1|317|apoptotic peptidase activating factor 1##NM_181869|APAF1|317|apoptotic peptidase activating factor 1##AK123069|IKBIP|121457|IKBKB interacting protein##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_153364|FAM71C|196472|family with sequence similarity 71, member C##AK312767|FAM71C|196472|family with sequence similarity 71, member C##BC031221|FAM71C|196472|family with sequence similarity 71, member C	0.168328	
chr15	68075741	68075857	reg1021048.p1	6.892	+	AK293459 NM_001206804	-234458	+	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	-240777	+	TSC_hg19_v1_chr15_-_67814131 BC047537	-261643	-	NM_001031807	42141	+	AF167160 NM_016166 BC118587 BC121797 TSC_hg19_v1_chr15_+_68346652 AK314515 BC104646	270813	+	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	270862	+	AK293459|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_001206804|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5##BC047537|LOC100506686|100506686|uncharacterized LOC100506686##NM_001031807|SKOR1|390598|SKI family transcriptional corepressor 1##AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1##NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1##BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1##BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1##AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1##BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1##BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1	0.235248	CTCF.p2:-17:0.235
chr4	158900017	158900122	reg1018945.p1	6.892	+	NM_000826 NM_001083619 NM_001083620 BC028736 AL832605 TSC_hg19_v1_chr4_+_158141879 AB209567 BC010574 L20814	-758185	+	TSC_hg19_v1_chr4_+_157997314 NM_000824 NM_001166061 AF094754 BC032635 AK290617 BC022502 U33267 NM_001166060 AF094755	-902635	+	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	-1007510	-	AK096792 AK129723 TSC_hg19_v1_chr4_+_159091940	191864	+	AL834177 AB527363 AM392540 AM392704 TSC_hg19_v1_chr4_-_159092534	192452	-	TSC_hg19_v1_chr4_-_159093526 AL832589	193463	-	NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##NM_000824|GLRB|2743|glycine receptor, beta##NM_001166061|GLRB|2743|glycine receptor, beta##AF094754|GLRB|2743|glycine receptor, beta##BC032635|GLRB|2743|glycine receptor, beta##AK290617|GLRB|2743|glycine receptor, beta##BC022502|GLRB|2743|glycine receptor, beta##U33267|GLRB|2743|glycine receptor, beta##NM_001166060|GLRB|2743|glycine receptor, beta##AF094755|GLRB|2743|glycine receptor, beta##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C##AK096792|LOC285505|285505|uncharacterized LOC285505##AK129723|LOC285505|285505|uncharacterized LOC285505##AL834177|FAM198B|51313|family with sequence similarity 198, member B##AM392540|FAM198B|51313|family with sequence similarity 198, member B##AM392704|FAM198B|51313|family with sequence similarity 198, member B##AL832589|FAM198B|51313|family with sequence similarity 198, member B	0.996764	CTCF.p2:19:0.997
chr7	142447904	142448027	reg1021995.p1	6.892	+	NM_001190487	-73835	+	AY358487 BC035384 AK122940 NM_001001317	-490104	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-636426	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	9361	+	M12426 TSC_hg19_v1_chr7_+_142495248	47230	+	TSC_hg19_v1_chr7_+_142552837 NM_004445 D83492 BC015495 BC051028 BC056159	104760	+	NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)##NM_004445|EPHB6|2051|EPH receptor B6##D83492|EPHB6|2051|EPH receptor B6##BC015495|EPHB6|2051|EPH receptor B6##BC051028|EPHB6|2051|EPH receptor B6##BC056159|EPHB6|2051|EPH receptor B6	0.903567	CTCF.p2:1:0.904
chr22	25233613	25233731	reg1021401.p1	6.891	+	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-31462	+	AB079368 NM_001008496 AK302409 AK315806	-62988	-	TSC_hg19_v1_chr22_+_25003637 NM_001032365	-230049	+	BC130647 BC130649 CR456388 NM_001001663	101640	-	BC171801 NM_001145206	190268	+	TSC_hg19_v1_chr22_+_25591072 AK025418	357457	+	NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AB079368|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001008496|PIWIL3|440822|piwi-like 3 (Drosophila)##AK302409|PIWIL3|440822|piwi-like 3 (Drosophila)##AK315806|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001032365|GGT1|2678|gamma-glutamyltransferase 1##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##AK025418|KIAA1671|85379|KIAA1671	0.830069	CTCF.p2:9:0.830
chr9	135134676	135134801	reg1021192.p2	6.891	+	AB058760 NM_032536 TSC_hg19_v1_chr9_+_135037469	-97335	+	TSC_hg19_v1_chr9_+_135037083 AY358165	-97647	+	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	-179488	-	TSC_hg19_v1_chr9_-_135230312 AK125448	95492	-	TSC_hg19_v1_chr9_-_135230352 AK307608 BX537849	95610	-	TSC_hg19_v1_chr9_-_135230374 BX538166 NM_015046	95669	-	AB058760|NTNG2|84628|netrin G2##NM_032536|NTNG2|84628|netrin G2##AY358165|NTNG2|84628|netrin G2##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AK125448|SETX|23064|senataxin##AK307608|SETX|23064|senataxin##BX537849|SETX|23064|senataxin##BX538166|SETX|23064|senataxin##NM_015046|SETX|23064|senataxin	0.0	
chr12	118842873	118842984	reg1020945.p2	6.890	+	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	-28526	+	TSC_hg19_v1_chr12_-_118810713 NM_016281	-32198	-	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	-32300	-	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	576419	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	773751	+	BC040553 NM_178499	929588	+	BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_016281|TAOK3|51347|TAO kinase 3##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60	0.997274	CTCF.p2:-15:0.997
chr21	45687816	45687956	reg1008080.p2	6.890	+	AF194032 NM_013369 NM_175867	-5788	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	-27029	-	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	-27120	-	BC142608 AK309572 AB006682 NM_000383 Z97990	17858	+	AB006683 AB006685 BC137268 BC137270 NM_000658	22324	+	TSC_hg19_v1_chr21_+_45719932 NM_002626 X15573	32041	+	AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC142608|AIRE|326|autoimmune regulator##AK309572|AIRE|326|autoimmune regulator##AB006682|AIRE|326|autoimmune regulator##NM_000383|AIRE|326|autoimmune regulator##Z97990|AIRE|326|autoimmune regulator##AB006683|AIRE|326|autoimmune regulator##AB006685|AIRE|326|autoimmune regulator##BC137268|AIRE|326|autoimmune regulator##BC137270|AIRE|326|autoimmune regulator##NM_000658|AIRE|326|autoimmune regulator##NM_002626|PFKL|5211|phosphofructokinase, liver##X15573|PFKL|5211|phosphofructokinase, liver	0.120759	
chr3	10206405	10206578	reg1019857.p2	6.890	+	TSC_hg19_v1_chr3_+_10183517 AB528056	-22953	+	AK304002 TSC_hg19_v1_chr3_+_10183487	-22993	+	L15409 NM_000551 NM_198156 TSC_hg19_v1_chr3_+_10183474 AK315799 BC058831 BC027957	-23089	+	NM_001570 BC125184 AK299033 AK312841 TSC_hg19_v1_chr3_+_10206602 AF026273 AB587544 AJ496794	109	+	TSC_hg19_v1_chr3_+_10290182 NM_014760	83684	+	TSC_hg19_v1_chr3_+_10290210 D86972	83771	+	AK304002|VHL|7428|von Hippel-Lindau tumor suppressor##L15409|VHL|7428|von Hippel-Lindau tumor suppressor##NM_000551|VHL|7428|von Hippel-Lindau tumor suppressor##NM_198156|VHL|7428|von Hippel-Lindau tumor suppressor##AK315799|VHL|7428|von Hippel-Lindau tumor suppressor##BC058831|VHL|7428|von Hippel-Lindau tumor suppressor##BC027957|VHL|7428|von Hippel-Lindau tumor suppressor##NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2##BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2##NM_014760|TATDN2|9797|TatD DNase domain containing 2##D86972|TATDN2|9797|TatD DNase domain containing 2	0.0	
chr3	50384778	50384907	reg1021133.p1	6.890	+	AB464423 AM392817 AM393187 CU689716 BC033732 TSC_hg19_v1_chr3_-_50383103 AK223343 AL833828 AK058135 AK308086 U70824 U70880 BC022186 NM_015896 AK315123	-1750	-	AB528642 AK300994 AF102770 AF102771 AF102772 AF286217 AF291719 AF132675 TSC_hg19_v1_chr3_-_50378282 BC117153 BC143879 NM_001206957 NM_007182 NM_170714	-6540	-	AF132677 BC110412 NM_170712 AK310032	-9159	-	HQ257917 AF040707 AF040708 AK292196 TSC_hg19_v1_chr3_-_50388213 BC002791 BC056861 AK309658 AL833426 BC050412 BC063030 BC021984	3322	-	TSC_hg19_v1_chr3_+_50388322 BX641103 BC047691 NM_007022 AF040704 AK291167	3453	+	BC008802 NM_006545	3643	-	AM392817|ZMYND10|51364|zinc finger, MYND-type containing 10##AM393187|ZMYND10|51364|zinc finger, MYND-type containing 10##BC033732|ZMYND10|51364|zinc finger, MYND-type containing 10##AK223343|ZMYND10|51364|zinc finger, MYND-type containing 10##AL833828|ZMYND10|51364|zinc finger, MYND-type containing 10##AK058135|ZMYND10|51364|zinc finger, MYND-type containing 10##AK308086|ZMYND10|51364|zinc finger, MYND-type containing 10##U70824|ZMYND10|51364|zinc finger, MYND-type containing 10##U70880|ZMYND10|51364|zinc finger, MYND-type containing 10##BC022186|ZMYND10|51364|zinc finger, MYND-type containing 10##NM_015896|ZMYND10|51364|zinc finger, MYND-type containing 10##AK315123|ZMYND10|51364|zinc finger, MYND-type containing 10##AK300994|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##AF102770|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##AF102771|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##AF102772|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##AF286217|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##AF291719|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##AF132675|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##BC117153|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##BC143879|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##NM_001206957|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##NM_007182|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##NM_170714|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##AF132677|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##BC110412|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##NM_170712|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##AF040707|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##AF040708|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##AK292196|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##BC056861|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##AK309658|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##AL833426|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##BC050412|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##BC063030|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##BC021984|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##BX641103|CYB561D2|11068|cytochrome b-561 domain containing 2##BC047691|CYB561D2|11068|cytochrome b-561 domain containing 2##NM_007022|CYB561D2|11068|cytochrome b-561 domain containing 2##AF040704|CYB561D2|11068|cytochrome b-561 domain containing 2##AK291167|CYB561D2|11068|cytochrome b-561 domain containing 2##BC008802|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##NM_006545|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)	0.993524	CTCF.p2:-7:0.994
chr3	59795617	59795751	reg1022153.p1	6.890	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-759924	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-759943	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-759976	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	1441406	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	1751527	+	BC047734 TSC_hg19_v1_chr3_+_61547294	1751602	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.735605	CTCF.p2:5:0.736
chr3	7117724	7117844	reg1019594.p1	6.889	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	-214886	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	-214985	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-1888293	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	1425546	-	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	1425731	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	1425797	+	X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1	0.436715	CTCF.p2:0:0.437
chr9	91894028	91894168	reg1023841.p1	6.889	+	BC026314 NM_016848 TSC_hg19_v1_chr9_-_91793734	-100388	-	DQ896663 TSC_hg19_v1_chr9_-_91793449 D84361	-100634	-	TSC_hg19_v1_chr9_+_91606382 AK312798 BC060827 NM_005226	-287728	+	TSC_hg19_v1_chr9_+_91926112 NM_001827 X54942 BC006458 AB527990 BT006630 CR407630 CR542118	32060	+	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	39320	+	BC054500 NM_001142287 NM_006378	200512	-	BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##DQ896663|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##D84361|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##AK312798|S1PR3|1903|sphingosine-1-phosphate receptor 3##BC060827|S1PR3|1903|sphingosine-1-phosphate receptor 3##NM_005226|S1PR3|1903|sphingosine-1-phosphate receptor 3##NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2##X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2##AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	0.026205	
chr10	126749772	126749901	reg1022455.p1	6.888	+	AF222711 NM_022802	-33384	-	NM_017580	-119145	+	NM_032182 TSC_hg19_v1_chr10_+_126490387 AK296677 D63877 BC008999	-259464	+	TSC_hg19_v1_chr10_-_126849010 AF016507 BC072020	99190	-	BC052276 AL833398 BC002486 TSC_hg19_v1_chr10_-_126849101 NM_001329	99280	-	TSC_hg19_v1_chr10_-_126849600 BC047018 NM_001083914	99757	-	AF222711|CTBP2|1488|C-terminal binding protein 2##NM_022802|CTBP2|1488|C-terminal binding protein 2##NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1##NM_032182|FAM175B|23172|family with sequence similarity 175, member B##AK296677|FAM175B|23172|family with sequence similarity 175, member B##D63877|FAM175B|23172|family with sequence similarity 175, member B##BC008999|FAM175B|23172|family with sequence similarity 175, member B##AF016507|CTBP2|1488|C-terminal binding protein 2##BC072020|CTBP2|1488|C-terminal binding protein 2##BC052276|CTBP2|1488|C-terminal binding protein 2##AL833398|CTBP2|1488|C-terminal binding protein 2##BC002486|CTBP2|1488|C-terminal binding protein 2##NM_001329|CTBP2|1488|C-terminal binding protein 2##BC047018|CTBP2|1488|C-terminal binding protein 2##NM_001083914|CTBP2|1488|C-terminal binding protein 2	0.87547	CTCF.p2:23:0.875
chr5	154019927	154020030	reg1017503.p1	6.888	+	TSC_hg19_v1_chr5_-_153857823 AF061756 NM_004821	-162156	-	TSC_hg19_v1_chr5_-_153857790 BC021190	-162190	-	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	-194368	+	BC001460 NM_015315 CU674716	72495	+	TSC_hg19_v1_chr5_+_154134891 AB018274	114917	+	TSC_hg19_v1_chr5_+_154135038 AK091465 AX747001	115103	+	AF061756|HAND1|9421|heart and neural crest derivatives expressed 1##NM_004821|HAND1|9421|heart and neural crest derivatives expressed 1##BC021190|HAND1|9421|heart and neural crest derivatives expressed 1##AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like##BC001460|LARP1|23367|La ribonucleoprotein domain family, member 1##NM_015315|LARP1|23367|La ribonucleoprotein domain family, member 1##AB018274|LARP1|23367|La ribonucleoprotein domain family, member 1##AK091465|LARP1|23367|La ribonucleoprotein domain family, member 1	0.0	
chr8	19615404	19615508	reg1020705.p1	6.888	+	AK314625 TSC_hg19_v1_chr8_-_19615422	-39	-	AY358441 NM_018371	-75363	-	BX649103 NM_001130518	-155426	-	TSC_hg19_v1_chr8_+_19674936 NM_018142	59465	+	TSC_hg19_v1_chr8_+_19674972 AK001431 AB590485	59547	+	NM_000237 S78266 TSC_hg19_v1_chr8_+_19796721	181196	+	AK314625|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AY358441|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018371|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##BX649103|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_001130518|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018142|INTS10|55174|integrator complex subunit 10##AK001431|INTS10|55174|integrator complex subunit 10##NM_000237|LPL|4023|lipoprotein lipase##S78266|LPL|4023|lipoprotein lipase	0.030131	
chr1	19668049	19668170	reg1018470.p1	6.887	+	NM_001040125 NM_001040126 NM_017765 TSC_hg19_v1_chr1_+_19638819 AK000327 AK130175 AK125580 AK130171 AK172745 BC015324	-29314	+	BC007352 BC012171 TSC_hg19_v1_chr1_-_19638614 BC010852 NM_003689	-29475	-	TSC_hg19_v1_chr1_-_19638598 Y16675 AF026947 AK225267	-29504	-	TSC_hg19_v1_chr1_-_19811972 AK313113 BC107752	143858	-	TSC_hg19_v1_chr1_-_19812006 AK125085	143897	-	NM_001206540 NM_004930 TSC_hg19_v1_chr1_-_19812073	143980	-	NM_001040125|PQLC2|54896|PQ loop repeat containing 2##NM_001040126|PQLC2|54896|PQ loop repeat containing 2##NM_017765|PQLC2|54896|PQ loop repeat containing 2##AK000327|PQLC2|54896|PQ loop repeat containing 2##AK130175|PQLC2|54896|PQ loop repeat containing 2##AK125580|PQLC2|54896|PQ loop repeat containing 2##AK130171|PQLC2|54896|PQ loop repeat containing 2##AK172745|PQLC2|54896|PQ loop repeat containing 2##BC015324|PQLC2|54896|PQ loop repeat containing 2##BC007352|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC012171|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC010852|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##NM_003689|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##Y16675|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AF026947|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AK225267|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AK313113|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##BC107752|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##AK125085|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_001206540|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_004930|CAPZB|832|capping protein (actin filament) muscle Z-line, beta	0.0	
chr12	28325500	28325628	reg1019490.p1	6.887	+	NM_002820 NM_198965	-200649	-	M26958 J03802 NM_198964 NM_198966 AK313476 M26960 BC005961 M26959	-202599	-	TSC_hg19_v1_chr12_+_27933193 AK095405 NM_020782 BC137116 BC137117 BC108669 AB528162 AB587405 EU446834	-392353	+	TSC_hg19_v1_chr12_+_28343404 BC035168	17847	+	AY289196 NM_018318 AB587421	84576	+	AL136843 TSC_hg19_v1_chr12_+_29302210 AK001324 AK314670 BC018460	976628	+	NM_002820|PTHLH|5744|parathyroid hormone-like hormone##NM_198965|PTHLH|5744|parathyroid hormone-like hormone##M26958|PTHLH|5744|parathyroid hormone-like hormone##J03802|PTHLH|5744|parathyroid hormone-like hormone##NM_198964|PTHLH|5744|parathyroid hormone-like hormone##NM_198966|PTHLH|5744|parathyroid hormone-like hormone##AK313476|PTHLH|5744|parathyroid hormone-like hormone##M26960|PTHLH|5744|parathyroid hormone-like hormone##BC005961|PTHLH|5744|parathyroid hormone-like hormone##M26959|PTHLH|5744|parathyroid hormone-like hormone##AK095405|KLHDC5|57542|kelch domain containing 5##NM_020782|KLHDC5|57542|kelch domain containing 5##BC137116|KLHDC5|57542|kelch domain containing 5##BC137117|KLHDC5|57542|kelch domain containing 5##BC108669|KLHDC5|57542|kelch domain containing 5##EU446834|KLHDC5|57542|kelch domain containing 5##AY289196|CCDC91|55297|coiled-coil domain containing 91##NM_018318|CCDC91|55297|coiled-coil domain containing 91##AL136843|FAR2|55711|fatty acyl CoA reductase 2##AK001324|FAR2|55711|fatty acyl CoA reductase 2##AK314670|FAR2|55711|fatty acyl CoA reductase 2	0.956854	CTCF.p2:0:0.957
chr19	14259020	14259147	reg1021313.p1	6.887	+	TSC_hg19_v1_chr19_+_14247979 BX537706	-11092	+	AK302134 TSC_hg19_v1_chr19_-_14247402 BC036521 AK001466 NM_018154	-11661	-	AB104486 AB463417 CR457235 GQ129346 GQ129347 AF279307 BC007726 BC010014 BC002518 TSC_hg19_v1_chr19_-_14247395 AK223080 AK001288	-11751	-	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	1717	-	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	57965	-	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	232966	+	BX537706|LOC100507373|100507373|uncharacterized LOC100507373##AK302134|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC036521|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK001466|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##NM_018154|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AB104486|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##CR457235|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##GQ129346|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##GQ129347|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AF279307|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC007726|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC010014|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK223080|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK001288|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule	0.450796	CTCF.p2:-1:0.451
chr2	89989735	89989845	reg1018728.p1	6.887	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-369937	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-476557	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-547201	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	87964	+	TSC_hg19_v1_chr2_+_90211706 Z69013	221928	+	TSC_hg19_v1_chr2_-_91847997 BC030764	1858213	-	BC070334|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus	0.829182	CTCF.p2:-19:0.829
chr10	5132206	5132335	reg1022098.p1	6.886	+	BC063574 AK091194 NM_001354 NM_205845	-72072	-	M33376 TSC_hg19_v1_chr10_-_5046050 AB021654 AB031084 BT006653 CU675503 DQ890680 DQ893862 S68330 BC007024 U05598 AK296419 AK308385 AK296686 NM_001135241 AK290304 AB209017	-86240	-	D26124 TSC_hg19_v1_chr10_+_5005695	-126580	+	TSC_hg19_v1_chr10_+_5136567 NM_003739 BC001479 D17793	4300	+	TSC_hg19_v1_chr10_+_5136605 AB018580 AK296701 AK290365 AK315411 AK310940	4329	+	BC019230 TSC_hg19_v1_chr10_+_5136613 S68288 AF149416 AM392923 BT007286 CU674730 CU676394 DQ890679 DQ893860 GQ129450 GQ129451	4363	+	BC063574|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AK091194|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##NM_001354|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##NM_205845|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##M33376|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AB021654|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AB031084|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##BT006653|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##DQ890680|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##DQ893862|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##S68330|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##BC007024|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##U05598|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AK296419|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AK308385|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AK296686|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##NM_001135241|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AK290304|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AB209017|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##D26124|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##NM_003739|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##BC001479|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##D17793|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AB018580|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK290365|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK315411|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK310940|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##BC019230|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68288|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AF149416|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AM392923|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##BT007286|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##DQ890679|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##DQ893860|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##GQ129450|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##GQ129451|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)	0.835296	CTCF.p2:-25:0.835
chr2	242598850	242598947	reg1018838.p1	6.886	+	TSC_hg19_v1_chr2_+_242577107 AK027763 AK296818 AK298109 BX648007 AB023160 AK027462 BC000719 AJ504652	-21788	+	TSC_hg19_v1_chr2_+_242577084 AL080168 NM_013325 NM_178326	-21863	+	TSC_hg19_v1_chr2_-_242576723 NM_015963	-22139	-	CR541986 CR542015 TSC_hg19_v1_chr2_-_242626210 X54729 BC001827	27312	-	TSC_hg19_v1_chr2_-_242626231 AK223434 BC147006 BC147010 BC171894 BC171902 BC171903 NM_001165031 NM_012145	27405	-	AB593140 TSC_hg19_v1_chr2_+_242626482	27578	+	AK027763|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##AK296818|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##AK298109|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##BX648007|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##AB023160|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##AK027462|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##BC000719|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##AJ504652|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##AL080168|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##NM_013325|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##NM_178326|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##NM_015963|THAP4|51078|THAP domain containing 4##CR541986|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##CR542015|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##X54729|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC001827|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##AK223434|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC147006|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC147010|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171894|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171902|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171903|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##NM_001165031|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##NM_012145|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)	0.022098	
chr4	52751681	52751790	reg1022682.p1	6.886	+	AK124346 NM_001040402 NM_015115 TSC_hg19_v1_chr4_+_52709318 BC053897 AK294896 BX537944 AK027051 D87466 BC041702 AM392554 AM392637 AM392729 AM393240	-42449	+	AK025164 NM_025087 BC137387 BC137388	-3763463	+	TSC_hg19_v1_chr4_-_48908795 CR749310 BC032808 AK298305 NM_001014446 NM_152398	-3842956	-	CR749811 NM_001024611	132050	-	BT019433 CR456810 DQ893140 DQ896425 EU176433 U29586 TSC_hg19_v1_chr4_-_52904447 AK299765 BC020709 AK289892 U31116 NM_000232	152722	-	TSC_hg19_v1_chr4_+_52917480 AK304386 AK057468 BC025396 NM_145263 AK314799	165798	+	AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK025164|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##NM_025087|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137387|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137388|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##CR749310|OCIAD2|132299|OCIA domain containing 2##BC032808|OCIAD2|132299|OCIA domain containing 2##AK298305|OCIAD2|132299|OCIA domain containing 2##NM_001014446|OCIAD2|132299|OCIA domain containing 2##NM_152398|OCIAD2|132299|OCIA domain containing 2##CR749811|LRRC66|339977|leucine rich repeat containing 66##NM_001024611|LRRC66|339977|leucine rich repeat containing 66##BT019433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR456810|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ893140|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ896425|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##EU176433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U29586|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK299765|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##BC020709|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK289892|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U31116|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##NM_000232|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK304386|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK057468|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BC025396|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##NM_145263|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK314799|SPATA18|132671|spermatogenesis associated 18 homolog (rat)	0.048086	
chr11	96963958	96964082	reg1020953.p1	6.885	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-840846	+	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	-840978	-	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	-887617	-	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	1927729	+	AB013802 AB013803 NM_175566	2462853	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	3594108	+	AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42	0.287886	CTCF.p2:-6:0.288
chr1	24439160	24439285	reg1020426.p1	6.885	+	BX647453 BX647644 BX647455 NM_152372 BC067101	-573	-	TSC_hg19_v1_chr1_-_24434930 AK125972 BX537911	-4253	-	TSC_hg19_v1_chr1_-_24306850 AK222994 AK296175 BC001107 NM_001191005 NM_001191006 NM_001191007 NM_001191009 NM_006625 NM_054016	-132330	-	AB590595 CU688622 AF286095 TSC_hg19_v1_chr1_-_24469610 AK226001 BC029273 BC014096 AK308522 AK292204 AK313971 NM_021258	30450	-	AF439325 AY129151 AY129152 AY129153 AB590083 AK160364 AJ534330 AJ534331 BC101407 BC101408 BC101975 BC139722 NM_170743 NM_173064 NM_173065 TSC_hg19_v1_chr1_-_24513772 BC140872	74553	-	NM_198173 NM_198174 TSC_hg19_v1_chr1_+_24645846	206606	+	BX647453|MYOM3|127294|myomesin family, member 3##BX647644|MYOM3|127294|myomesin family, member 3##BX647455|MYOM3|127294|myomesin family, member 3##NM_152372|MYOM3|127294|myomesin family, member 3##BC067101|MYOM3|127294|myomesin family, member 3##AK125972|MYOM3|127294|myomesin family, member 3##BX537911|MYOM3|127294|myomesin family, member 3##AK222994|SRSF10|10772|serine/arginine-rich splicing factor 10##AK296175|SRSF10|10772|serine/arginine-rich splicing factor 10##BC001107|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_001191005|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_001191006|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_001191007|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_001191009|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_006625|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_054016|SRSF10|10772|serine/arginine-rich splicing factor 10##AF286095|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK226001|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC029273|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC014096|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK308522|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK292204|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK313971|IL22RA1|58985|interleukin 22 receptor, alpha 1##NM_021258|IL22RA1|58985|interleukin 22 receptor, alpha 1##AF439325|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129151|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129152|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129153|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AK160364|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AJ534330|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AJ534331|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101407|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101408|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101975|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC139722|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_170743|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_173064|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_173065|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC140872|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_198173|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_198174|GRHL3|57822|grainyhead-like 3 (Drosophila)	0.0	
chr3	52087008	52087125	reg1017694.p1	6.885	+	BC008926 NM_000992 TSC_hg19_v1_chr3_-_52029968	-57103	-	TSC_hg19_v1_chr3_-_52029912 BC070190 AK289538 AK311884 D28412	-57153	-	TSC_hg19_v1_chr3_-_52029890 BC071663 U49083 U10248 Z49148 BC071909 BC070481	-57185	-	X93921 TSC_hg19_v1_chr3_-_52090192 BC019107 AF508727 BC104880 BC104882 NM_001947	3209	-	TSC_hg19_v1_chr3_-_52188413 BC119692 AK075289 BC119693 AK315688	101364	-	BC110877 NM_001161580 NM_001161581 NM_015426	101639	-	BC008926|RPL29|6159|ribosomal protein L29##NM_000992|RPL29|6159|ribosomal protein L29##BC070190|RPL29|6159|ribosomal protein L29##AK289538|RPL29|6159|ribosomal protein L29##AK311884|RPL29|6159|ribosomal protein L29##D28412|RPL29|6159|ribosomal protein L29##BC071663|RPL29|6159|ribosomal protein L29##U49083|RPL29|6159|ribosomal protein L29##U10248|RPL29|6159|ribosomal protein L29##Z49148|RPL29|6159|ribosomal protein L29##BC071909|RPL29|6159|ribosomal protein L29##BC070481|RPL29|6159|ribosomal protein L29##X93921|DUSP7|1849|dual specificity phosphatase 7##BC019107|DUSP7|1849|dual specificity phosphatase 7##AF508727|DUSP7|1849|dual specificity phosphatase 7##BC104880|DUSP7|1849|dual specificity phosphatase 7##BC104882|DUSP7|1849|dual specificity phosphatase 7##NM_001947|DUSP7|1849|dual specificity phosphatase 7##BC119692|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK075289|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC119693|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK315688|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC110877|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161580|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161581|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_015426|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)	0.103077	
chr3	8811166	8811279	reg1019523.p2	6.885	+	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	-136	-	AK291892 NM_001234 NM_033337 BC069368 AF036365 BC102033 BC102036 BC102037 Y14747 CU686780 AF043101	-35697	+	TSC_hg19_v1_chr3_-_8693765 AB024705 NM_015931 BC052614	-117468	-	TSC_hg19_v1_chr3_-_8811300 NM_000916	62	-	AB528316 DQ891197 DQ894380 TSC_hg19_v1_chr3_-_9005128 AY004333 BC001302 AK222771 AF169796 AK023075 NM_020165	193908	-	AB007871 AB384477 AK094355 AF427144 TSC_hg19_v1_chr3_-_9290871 AF464189	479522	-	X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor##AK291892|CAV3|859|caveolin 3##NM_001234|CAV3|859|caveolin 3##NM_033337|CAV3|859|caveolin 3##BC069368|CAV3|859|caveolin 3##AF036365|CAV3|859|caveolin 3##BC102033|CAV3|859|caveolin 3##BC102036|CAV3|859|caveolin 3##BC102037|CAV3|859|caveolin 3##Y14747|CAV3|859|caveolin 3##AF043101|CAV3|859|caveolin 3##AB024705|C3orf32|51066|chromosome 3 open reading frame 32##NM_015931|C3orf32|51066|chromosome 3 open reading frame 32##BC052614|C3orf32|51066|chromosome 3 open reading frame 32##NM_000916|OXTR|5021|oxytocin receptor##DQ891197|RAD18|56852|RAD18 homolog (S. cerevisiae)##DQ894380|RAD18|56852|RAD18 homolog (S. cerevisiae)##AY004333|RAD18|56852|RAD18 homolog (S. cerevisiae)##BC001302|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK222771|RAD18|56852|RAD18 homolog (S. cerevisiae)##AF169796|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK023075|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_020165|RAD18|56852|RAD18 homolog (S. cerevisiae)##AB007871|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK094355|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF427144|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF464189|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3	0.808211	CTCF.p2:0:0.808
chr11	126744869	126744988	reg1023614.p1	6.884	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	-468930	+	NM_006278 X74570	-518833	+	TSC_hg19_v1_chr11_-_126225452 AK096370	-519465	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	125732	-	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	125797	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	128377	+	AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK096370|FLJ39051|399972|uncharacterized LOC399972##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)	0.144229	
chr4	175077519	175077640	reg1021198.p1	6.884	+	EF529495 EF529496 EF529497 EF529498 EF529499 EF529500 EF529501 EF529502 EF529503 EF529504 EF529505 EF529506 EF529507 EF529508 EF529509 EU000853 EU000854 EU000855 EU000856 TSC_hg19_v1_chr4_+_174451609 AB075501 AK300846 AK054605	-625969	+	TSC_hg19_v1_chr4_-_174451381 NM_021973 AK122739 FJ226608	-626210	-	BC101406 BC101974 BC109383 TSC_hg19_v1_chr4_-_174450570	-627029	-	AF174596 AF233224 TSC_hg19_v1_chr4_-_175204794 AF115514 AY358721 BC014679 AF201932 AK026319 BC040456 AK314483	127155	-	NM_001040157 TSC_hg19_v1_chr4_+_175204877	127281	+	TSC_hg19_v1_chr4_+_175205073 NM_001145314 BC038667 AB051499 AK094961 AK292484	127534	+	EF529495|NBLA00301|79804|Nbla00301##EF529496|NBLA00301|79804|Nbla00301##EF529497|NBLA00301|79804|Nbla00301##EF529498|NBLA00301|79804|Nbla00301##EF529499|NBLA00301|79804|Nbla00301##EF529500|NBLA00301|79804|Nbla00301##EF529501|NBLA00301|79804|Nbla00301##EF529502|NBLA00301|79804|Nbla00301##EF529503|NBLA00301|79804|Nbla00301##EF529504|NBLA00301|79804|Nbla00301##EF529505|NBLA00301|79804|Nbla00301##EF529506|NBLA00301|79804|Nbla00301##EF529507|NBLA00301|79804|Nbla00301##EF529508|NBLA00301|79804|Nbla00301##EF529509|NBLA00301|79804|Nbla00301##EU000853|NBLA00301|79804|Nbla00301##EU000854|NBLA00301|79804|Nbla00301##EU000855|NBLA00301|79804|Nbla00301##EU000856|NBLA00301|79804|Nbla00301##AB075501|NBLA00301|79804|Nbla00301##AK054605|NBLA00301|79804|Nbla00301##NM_021973|HAND2|9464|heart and neural crest derivatives expressed 2##AK122739|HAND2|9464|heart and neural crest derivatives expressed 2##FJ226608|HAND2|9464|heart and neural crest derivatives expressed 2##BC101406|HAND2|9464|heart and neural crest derivatives expressed 2##BC101974|HAND2|9464|heart and neural crest derivatives expressed 2##BC109383|HAND2|9464|heart and neural crest derivatives expressed 2##AF174596|FBXO8|26269|F-box protein 8##AF233224|FBXO8|26269|F-box protein 8##AF115514|FBXO8|26269|F-box protein 8##AY358721|FBXO8|26269|F-box protein 8##BC014679|FBXO8|26269|F-box protein 8##AF201932|FBXO8|26269|F-box protein 8##AK026319|FBXO8|26269|F-box protein 8##BC040456|FBXO8|26269|F-box protein 8##AK314483|FBXO8|26269|F-box protein 8##NM_001040157|CEP44|80817|centrosomal protein 44kDa##NM_001145314|CEP44|80817|centrosomal protein 44kDa##BC038667|CEP44|80817|centrosomal protein 44kDa##AB051499|CEP44|80817|centrosomal protein 44kDa##AK094961|CEP44|80817|centrosomal protein 44kDa##AK292484|CEP44|80817|centrosomal protein 44kDa	0.977716	CTCF.p2:0:0.978
chr1	116711113	116711216	reg1017269.p2	6.883	+	AK096035 NM_152367	-56789	+	TSC_hg19_v1_chr1_+_116519194 BC070033 AY358258 AY145501 CU693234 DQ892367 DQ895576	-191935	+	NM_018420 BC026358 TSC_hg19_v1_chr1_+_116519161	-192021	+	NM_000701 TSC_hg19_v1_chr1_+_116915824	204647	+	BC003077 TSC_hg19_v1_chr1_+_116915881 BC050359	204718	+	TSC_hg19_v1_chr1_+_116915952 AK314777	204784	+	AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)##BC070033|SLC22A15|55356|solute carrier family 22, member 15##AY358258|SLC22A15|55356|solute carrier family 22, member 15##AY145501|SLC22A15|55356|solute carrier family 22, member 15##DQ892367|SLC22A15|55356|solute carrier family 22, member 15##DQ895576|SLC22A15|55356|solute carrier family 22, member 15##NM_018420|SLC22A15|55356|solute carrier family 22, member 15##BC026358|SLC22A15|55356|solute carrier family 22, member 15##NM_000701|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC003077|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC050359|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK314777|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.837684	CTCF.p2:2:0.838
chr1	159977486	159977626	reg1018889.p1	6.883	+	BC074754 BC070213 AY358801 AF275725 AY034613 NM_001146172 NM_001146173 NM_033438	-53554	-	TSC_hg19_v1_chr1_-_159915401 AB037776 BC030141 NM_001135050 NM_020789 AY358128	-62162	-	TSC_hg19_v1_chr1_-_159895294 BC002616 D21261 GU727636 NM_003564 AK291562 AK298654	-82269	-	CU676470 TSC_hg19_v1_chr1_-_160001654 BC001803	24040	-	AB028127 TSC_hg19_v1_chr1_-_160001781 BC019865 AK074655 BC011395 NM_145167	24198	-	BC131627 BC034036 AK312383 TSC_hg19_v1_chr1_-_160040009 U52155 NM_002241	62442	-	BC074754|SLAMF9|89886|SLAM family member 9##BC070213|SLAMF9|89886|SLAM family member 9##AY358801|SLAMF9|89886|SLAM family member 9##AF275725|SLAMF9|89886|SLAM family member 9##AY034613|SLAMF9|89886|SLAM family member 9##NM_001146172|SLAMF9|89886|SLAM family member 9##NM_001146173|SLAMF9|89886|SLAM family member 9##NM_033438|SLAMF9|89886|SLAM family member 9##AB037776|IGSF9|57549|immunoglobulin superfamily, member 9##BC030141|IGSF9|57549|immunoglobulin superfamily, member 9##NM_001135050|IGSF9|57549|immunoglobulin superfamily, member 9##NM_020789|IGSF9|57549|immunoglobulin superfamily, member 9##AY358128|IGSF9|57549|immunoglobulin superfamily, member 9##BC002616|TAGLN2|8407|transgelin 2##D21261|TAGLN2|8407|transgelin 2##GU727636|TAGLN2|8407|transgelin 2##NM_003564|TAGLN2|8407|transgelin 2##AK291562|TAGLN2|8407|transgelin 2##AK298654|TAGLN2|8407|transgelin 2##BC001803|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AB028127|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC019865|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AK074655|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC011395|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##NM_145167|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC131627|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##BC034036|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##AK312383|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##U52155|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##NM_002241|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10	0.674392	CTCF.p2:23:0.674
chr19	14247720	14247839	reg1018591.p2	6.883	+	AK302134 TSC_hg19_v1_chr19_-_14247402 BC036521 AK001466 NM_018154	-357	-	AB104486 AB463417 CR457235 GQ129346 GQ129347 AF279307 BC007726 BC010014 BC002518 TSC_hg19_v1_chr19_-_14247395 AK223080 AK001288	-447	-	TSC_hg19_v1_chr19_-_14228563 AK290147	-19210	-	TSC_hg19_v1_chr19_+_14247979 BX537706	212	+	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	13021	-	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	69269	-	AK302134|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC036521|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK001466|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##NM_018154|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AB104486|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##CR457235|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##GQ129346|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##GQ129347|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AF279307|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC007726|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC010014|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK223080|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK001288|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK290147|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1	0.041862	
chr2	96278880	96278996	reg1020148.p2	6.883	+	BC015353 NM_138800	-21173	+	NM_001164464	-128460	-	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	-210459	+	TSC_hg19_v1_chr2_-_96482383 BC117383 BC126153 AK057596	203507	-	TSC_hg19_v1_chr2_-_96657677 AK302433	378684	-	TSC_hg19_v1_chr2_+_96676311 BC015216	397386	+	BC015353|TRIM43|129868|tripartite motif containing 43##NM_138800|TRIM43|129868|tripartite motif containing 43##NM_001164464|TRIM43B|653192|tripartite motif containing 43B##AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##AK057596|LINC00342|150759|long intergenic non-protein coding RNA 342##AK302433|ANKRD36C|400986|ankyrin repeat domain 36C	0.660271	CTCF.p2:-12:0.660
chr8	61385942	61386058	reg1019348.p2	6.883	+	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	-192079	-	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	-1354328	-	NM_003580 TSC_hg19_v1_chr8_-_59572413	-1813589	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	43440	+	AK297576 TSC_hg19_v1_chr8_+_61429494	43494	+	TSC_hg19_v1_chr8_+_61429545 AK312344	43546	+	BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family##AK297576|RAB2A|5862|RAB2A, member RAS oncogene family##AK312344|RAB2A|5862|RAB2A, member RAS oncogene family	0.748261	CTCF.p2:-4:0.748
chr12	31902311	31902491	reg1020581.p2	6.882	+	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	-20345	-	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	-20427	-	NM_001135863 TSC_hg19_v1_chr12_+_31812621 AL832339 BC039107	-89787	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	42803	-	TSC_hg19_v1_chr12_+_32112348 NM_018169	209930	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	209993	+	BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001135863|METTL20|254013|methyltransferase like 20##AL832339|METTL20|254013|methyltransferase like 20##BC039107|METTL20|254013|methyltransferase like 20##BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35	0.0	
chr2	176052272	176052417	reg1022573.p1	6.882	+	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	-6040	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	-19449	-	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	-182331	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	814631	-	NM_001080458	896345	-	TSC_hg19_v1_chr2_+_176957451 NM_000523 AB463753	905200	+	CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715##NM_001080458|EVX2|344191|even-skipped homeobox 2##NM_000523|HOXD13|3239|homeobox D13	0.262325	CTCF.p2:6:0.262
chr5	50254855	50254958	reg1020557.p1	6.882	+	TSC_hg19_v1_chr5_+_49962920 AB463183 AM393004	-291979	+	NM_001178056 NM_024615 AK289369 TSC_hg19_v1_chr5_+_49962800 AL834477 BC075801	-292115	+	AK298680 AK314466 BC105789 NM_001178055	-293174	+	BC031213 NM_002202	424051	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	424347	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	1829083	+	AM393004|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178056|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_024615|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK289369|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AL834477|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC075801|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC031213|ISL1|3670|ISL LIM homeobox 1##NM_002202|ISL1|3670|ISL LIM homeobox 1##AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1	0.99724	CTCF.p2:-15:0.997
chr6	169284833	169284938	reg1019960.p2	6.882	+	TSC_hg19_v1_chr6_+_168841879 AK056700 AL832303 AB014730 AB014737	-442934	+	TSC_hg19_v1_chr6_+_168841866 BC047583 AJ420521 AK314613	-443023	+	TSC_hg19_v1_chr6_+_168841832 BC028420 NM_001166412 NM_022138	-443050	+	TSC_hg19_v1_chr6_-_169650910 AB384955	366017	-	BC146676 BC150175 TSC_hg19_v1_chr6_-_169653942	369048	-	TSC_hg19_v1_chr6_-_169654117 L12350 NM_003247 AK292429	369229	-	AK056700|SMOC2|64094|SPARC related modular calcium binding 2##AL832303|SMOC2|64094|SPARC related modular calcium binding 2##AB014730|SMOC2|64094|SPARC related modular calcium binding 2##AB014737|SMOC2|64094|SPARC related modular calcium binding 2##BC047583|SMOC2|64094|SPARC related modular calcium binding 2##AJ420521|SMOC2|64094|SPARC related modular calcium binding 2##AK314613|SMOC2|64094|SPARC related modular calcium binding 2##BC028420|SMOC2|64094|SPARC related modular calcium binding 2##NM_001166412|SMOC2|64094|SPARC related modular calcium binding 2##NM_022138|SMOC2|64094|SPARC related modular calcium binding 2##BC146676|THBS2|7058|thrombospondin 2##BC150175|THBS2|7058|thrombospondin 2##L12350|THBS2|7058|thrombospondin 2##NM_003247|THBS2|7058|thrombospondin 2##AK292429|THBS2|7058|thrombospondin 2	0.960041	CTCF.p2:19:0.960
chr6	28101918	28102054	reg1021080.p1	6.882	+	AK025844 AK294017 AK309837 NM_025231 TSC_hg19_v1_chr6_+_28092406 BC004255	-9587	+	NM_003447	-53505	+	BC109251 BC110457 NM_012367	-176968	+	TSC_hg19_v1_chr6_-_28104623 AK309286 BC043177	2612	-	TSC_hg19_v1_chr6_+_28109660 AB208793 BC096282 BC096283 BC096284 BC130032 NM_006298 U57796	7705	+	AK292767 BC050562 BC015543 BC039027 TSC_hg19_v1_chr6_-_28186889	84790	-	AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16##NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16##BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16##NM_003447|ZNF165|7718|zinc finger protein 165##BC109251|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##BC110457|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##NM_012367|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##AK309286|LOC100129195|100129195|uncharacterized LOC100129195##BC043177|LOC100129195|100129195|uncharacterized LOC100129195##AB208793|ZNF192|7745|zinc finger protein 192##BC096282|ZNF192|7745|zinc finger protein 192##BC096283|ZNF192|7745|zinc finger protein 192##BC096284|ZNF192|7745|zinc finger protein 192##BC130032|ZNF192|7745|zinc finger protein 192##NM_006298|ZNF192|7745|zinc finger protein 192##U57796|ZNF192|7745|zinc finger protein 192##AK292767|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC050562|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC015543|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC039027|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1	0.915787	CTCF.p2:-13:0.916
chr20	32778531	32778651	reg1018845.p1	6.881	+	TSC_hg19_v1_chr20_-_32700082 NM_003908	-78506	-	AB451237 AB451362 BT009795 CR456734 CU674464 AB590122 TSC_hg19_v1_chr20_-_32700021 AB208966 M29536 BC107588 BC000934 AK313025 BC000461	-78595	-	AK291079 TSC_hg19_v1_chr20_+_32581883 AK291054	-196708	+	NM_001672 BC104238 BC104239	69583	+	BT006697 CU679982 DQ890569 DQ891701 DQ893730 DQ895397 TSC_hg19_v1_chr20_-_32891162 M61832 M61831 BC010018 BC011606 AK300014 AK316180 AK290422 AK309204 NM_000687	112553	-	AK097610 NM_001161766	121016	-	NM_003908|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB451237|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB451362|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BT009795|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##CR456734|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB208966|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##M29536|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC107588|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000934|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AK313025|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000461|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AK291079|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK291054|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##NM_001672|ASIP|434|agouti signaling protein##BC104238|ASIP|434|agouti signaling protein##BC104239|ASIP|434|agouti signaling protein##BT006697|AHCY|191|adenosylhomocysteinase##DQ890569|AHCY|191|adenosylhomocysteinase##DQ891701|AHCY|191|adenosylhomocysteinase##DQ893730|AHCY|191|adenosylhomocysteinase##DQ895397|AHCY|191|adenosylhomocysteinase##M61832|AHCY|191|adenosylhomocysteinase##M61831|AHCY|191|adenosylhomocysteinase##BC010018|AHCY|191|adenosylhomocysteinase##BC011606|AHCY|191|adenosylhomocysteinase##AK300014|AHCY|191|adenosylhomocysteinase##AK316180|AHCY|191|adenosylhomocysteinase##AK290422|AHCY|191|adenosylhomocysteinase##AK309204|AHCY|191|adenosylhomocysteinase##NM_000687|AHCY|191|adenosylhomocysteinase##AK097610|AHCY|191|adenosylhomocysteinase##NM_001161766|AHCY|191|adenosylhomocysteinase	0.827493	CTCF.p2:-8:0.827
chr7	77570082	77570239	reg1019185.p2	6.881	+	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-100651	+	BC067742 TSC_hg19_v1_chr7_+_77428204 AL136883	-141950	+	TSC_hg19_v1_chr7_+_77428194 NM_001127358 NM_001127360 AK225854 AK090643 AX746556 AK308289	-142019	+	AB014605 BC150277 AK297353 AF038563 NM_012301	1512719	-	TSC_hg19_v1_chr7_+_79083303 AK311103	1512997	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	2193979	+	BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##BC067742|PHTF2|57157|putative homeodomain transcription factor 2##AL136883|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2##AK225854|PHTF2|57157|putative homeodomain transcription factor 2##AK090643|PHTF2|57157|putative homeodomain transcription factor 2##AK308289|PHTF2|57157|putative homeodomain transcription factor 2##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1	0.954571	CTCF.p2:-16:0.955
chr22	39891576	39891662	reg1021137.p1	6.880	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	-8329	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	-38083	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	-38299	+	TSC_hg19_v1_chr22_+_39898257 NM_019008	6646	+	TSC_hg19_v1_chr22_+_39898332 AL834205	6691	+	TSC_hg19_v1_chr22_+_39898363 AL365515	6740	+	NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_019008|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL834205|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL365515|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like	0.999179	CTCF.p2:-5:0.999
chr8	106945404	106945555	reg1020582.p2	6.880	+	AF119334 BC109222 BC109223 NM_012082	-614333	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-1344232	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-1344304	-	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	336944	+	AK296561 NM_001198532	514672	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	724509	+	AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1	0.524011	CTCF.p2:-16:0.524
chr9	119409619	119409771	reg1021306.p1	6.880	+	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	-493625	+	AB022761 NM_017418	-1505599	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-1529222	-	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	39767	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	39911	+	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	767618	-	NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2	0.833692	CTCF.p2:-7:0.834
chr13	113683898	113684032	reg1017180.p1	6.879	+	TSC_hg19_v1_chr13_+_113656104 DQ892041 DQ895233	-27816	+	TSC_hg19_v1_chr13_+_113656052 BC011853 BC020208	-27907	+	NM_024979 TSC_hg19_v1_chr13_+_113656027 AK295047	-27931	+	TSC_hg19_v1_chr13_+_113698965 AK094768	14980	+	BC107066 TSC_hg19_v1_chr13_+_113741727	57732	+	AK310779 TSC_hg19_v1_chr13_+_113760101 AK298404 NM_000131 NM_019616 BC130468 M13232 AF272774 AK311682 AB527973 EU557239 HQ258414 AK311565	76178	+	DQ892041|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##DQ895233|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##BC011853|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##BC020208|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##NM_024979|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK295047|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK094768|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##BC107066|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK310779|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##AK298404|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##NM_000131|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##NM_019616|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##BC130468|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##M13232|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##AK311682|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##EU557239|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##HQ258414|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##AK311565|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)	1.322339	CTCF.p2:18:0.999	CTCF.p2:107:0.306
chr2	179885006	179885121	reg1019339.p1	6.879	+	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-212960	-	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	-225362	-	TSC_hg19_v1_chr2_+_179387947 AK093733	-497103	+	AL832777 NM_173648	29722	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	244342	-	AK057999 NM_001113398	542251	-	X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##X98114|TTN|7273|titin##X98115|TTN|7273|titin##AK093733|LOC100506866|100506866|uncharacterized LOC100506866##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B	0.0	
chr9	95527729	95527840	reg1019635.p1	6.879	+	AB014599 TSC_hg19_v1_chr9_-_95527124 AY052562 NM_001003800 NM_015250 BC073970	-701	-	TSC_hg19_v1_chr9_-_95432542 BC026154 NM_022755	-95227	-	AF520811 TSC_hg19_v1_chr9_-_95432355 AK023225 AF351202	-95471	-	AK299274 TSC_hg19_v1_chr9_-_95640325 AK091203 AX746846 NM_001007101 AL833202 NM_031486 AK292997 AK309617	112493	-	NM_001083536	181816	+	NM_033086 BX647829 BC111054 AY211386	208965	+	AB014599|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AY052562|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_001003800|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_015250|BICD2|23299|bicaudal D homolog 2 (Drosophila)##BC073970|BICD2|23299|bicaudal D homolog 2 (Drosophila)##BC026154|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##NM_022755|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF520811|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AK023225|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF351202|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AK299274|ZNF484|83744|zinc finger protein 484##AK091203|ZNF484|83744|zinc finger protein 484##NM_001007101|ZNF484|83744|zinc finger protein 484##AL833202|ZNF484|83744|zinc finger protein 484##NM_031486|ZNF484|83744|zinc finger protein 484##AK292997|ZNF484|83744|zinc finger protein 484##AK309617|ZNF484|83744|zinc finger protein 484##NM_001083536|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##NM_033086|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BX647829|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BC111054|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AY211386|FGD3|89846|FYVE, RhoGEF and PH domain containing 3	0.999222	CTCF.p2:5:0.999
chrX	106117428	106117603	reg1021075.p1	6.879	+	TSC_hg19_v1_chrX_+_106045925 AK123957 NM_017752 NM_198881 BC122564 BX648230 AB449890 AB449891	-71534	+	TSC_hg19_v1_chrX_+_105969932 AK074264 NM_194463 BC063404 AF394689 CU687692	-147507	+	BC036901 NM_024539 AK126553	-180440	+	AF177340 NM_001171092	25878	+	BC007652 BC101998 BC105691 BC105692 BC110436 BC127250 NM_001171706 NM_138382	29038	-	AK312515 NM_001171095	44074	+	AK123957|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_017752|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_198881|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BC122564|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BX648230|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449890|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449891|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AK074264|RNF128|79589|ring finger protein 128##NM_194463|RNF128|79589|ring finger protein 128##BC063404|RNF128|79589|ring finger protein 128##AF394689|RNF128|79589|ring finger protein 128##BC036901|RNF128|79589|ring finger protein 128##NM_024539|RNF128|79589|ring finger protein 128##AK126553|RNF128|79589|ring finger protein 128##AF177340|CLDN2|9075|claudin 2##NM_001171092|CLDN2|9075|claudin 2##BC007652|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC101998|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC105691|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC105692|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC110436|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC127250|RIPPLY1|92129|ripply1 homolog (zebrafish)##NM_001171706|RIPPLY1|92129|ripply1 homolog (zebrafish)##NM_138382|RIPPLY1|92129|ripply1 homolog (zebrafish)##AK312515|CLDN2|9075|claudin 2##NM_001171095|CLDN2|9075|claudin 2	0.999663	CTCF.p2:1:1.000
chr10	126320685	126320814	reg1021038.p1	6.878	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-170328	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-182172	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-213231	-	D50930 TSC_hg19_v1_chr10_-_126432660	111895	-	TSC_hg19_v1_chr10_-_126432823 BC031654	112067	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	112162	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.04762	
chr10	30316115	30316239	reg1017944.p1	6.878	+	TSC_hg19_v1_chr10_-_30025865 AK307640	-290271	-	TSC_hg19_v1_chr10_-_30024866 AF051850 NM_003174	-291413	-	AF109135 NM_021738 TSC_hg19_v1_chr10_-_29923901	-392270	-	TSC_hg19_v1_chr10_-_30316350 BC047548	254	-	TSC_hg19_v1_chr10_-_30348516 AK308850 NM_020848 BC071601	32317	-	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	322056	-	AK307640|SVIL|6840|supervillin##AF051850|SVIL|6840|supervillin##NM_003174|SVIL|6840|supervillin##AF109135|SVIL|6840|supervillin##NM_021738|SVIL|6840|supervillin##BC047548|KIAA1462|57608|KIAA1462##AK308850|KIAA1462|57608|KIAA1462##NM_020848|KIAA1462|57608|KIAA1462##BC071601|KIAA1462|57608|KIAA1462##AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase	0.786906	CTCF.p2:56:0.787
chr1	27728974	27729092	reg1013068.p1	6.877	+	BC032702 NM_005281 TSC_hg19_v1_chr1_+_27719158 AK291185 AK314868	-9867	+	BC137466 AY358761 NM_207397	-19241	-	AY358081 CR456808 DQ892028 DQ895220 AK309540 AK075140 AK309576 BC020731 NM_003665 NM_173452 AY358283	-27718	-	BC001524 BC001855 AK024540 TSC_hg19_v1_chr1_-_27732180 AY007122	3151	-	TSC_hg19_v1_chr1_-_27816621 AK303011 BC032724 BC050093 BC040943	87567	-	TSC_hg19_v1_chr1_-_27816670 BC012329	87638	-	BC032702|GPR3|2827|G protein-coupled receptor 3##NM_005281|GPR3|2827|G protein-coupled receptor 3##AK291185|GPR3|2827|G protein-coupled receptor 3##AK314868|GPR3|2827|G protein-coupled receptor 3##BC137466|CD164L2|388611|CD164 sialomucin-like 2##AY358761|CD164L2|388611|CD164 sialomucin-like 2##NM_207397|CD164L2|388611|CD164 sialomucin-like 2##AY358081|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##CR456808|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##DQ892028|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##DQ895220|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AK309540|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AK075140|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##BC020731|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_003665|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##NM_173452|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##AY358283|FCN3|8547|ficolin (collagen/fibrinogen domain containing) 3 (Hakata antigen)##BC001524|WASF2|10163|WAS protein family, member 2##BC001855|WASF2|10163|WAS protein family, member 2##AK024540|WASF2|10163|WAS protein family, member 2##AY007122|WASF2|10163|WAS protein family, member 2##AK303011|WASF2|10163|WAS protein family, member 2##BC032724|WASF2|10163|WAS protein family, member 2##BC040943|WASF2|10163|WAS protein family, member 2##BC012329|WASF2|10163|WAS protein family, member 2	0.990509	CTCF.p2:-20:0.991
chr14	103987542	103987627	reg1017414.p1	6.877	+	TSC_hg19_v1_chr14_+_103851775 AF465413 BC024773 U64205	-135698	+	TSC_hg19_v1_chr14_+_103851772 BX161395	-135814	+	TSC_hg19_v1_chr14_+_103851700 NM_001128918 NM_001128919 NM_001128920 NM_001128921 NM_002376	-135881	+	CR542268 CU676412 M16364 TSC_hg19_v1_chr14_-_103988931	1296	-	M16451 L47647 TSC_hg19_v1_chr14_-_103989168 BC004914 BC019259 BC008323 BC001190 BC019281 BC010002 AK290101 AK312282 AK298198	1559	-	NM_001823 TSC_hg19_v1_chr14_-_103989206	1618	-	AF465413|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##BC024773|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##U64205|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##BX161395|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128918|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128919|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128920|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128921|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_002376|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##CR542268|CKB|1152|creatine kinase, brain##M16364|CKB|1152|creatine kinase, brain##M16451|CKB|1152|creatine kinase, brain##L47647|CKB|1152|creatine kinase, brain##BC004914|CKB|1152|creatine kinase, brain##BC019259|CKB|1152|creatine kinase, brain##BC008323|CKB|1152|creatine kinase, brain##BC001190|CKB|1152|creatine kinase, brain##BC019281|CKB|1152|creatine kinase, brain##BC010002|CKB|1152|creatine kinase, brain##AK290101|CKB|1152|creatine kinase, brain##AK312282|CKB|1152|creatine kinase, brain##AK298198|CKB|1152|creatine kinase, brain##NM_001823|CKB|1152|creatine kinase, brain	0.418114	CTCF.p2:-6:0.418
chr16	32951308	32951424	reg1019981.p1	6.877	+	AK300387 TSC_hg19_v1_chr16_+_32752635	-198730	+	AL133588 NM_016212	-263314	-	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	-263933	-	AL133588 NM_016212	253613	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	254232	+	AL133588 NM_016212	310148	+	AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3	1.105722	CTCF.p2:2:0.979
chr19	51942304	51942436	reg1019657.p2	6.877	+	TSC_hg19_v1_chr19_-_51920897 AK289900 AF310233 AY358337 AK290542 AK294185 AK303514 AK303717 BC101725 BC143497 BC143500 AF301007 AK292025 AK308982 AY032685 AF311905 NM_001171156 NM_001171157 NM_001171158 NM_001171159 NM_001171160 NM_001171161 NM_033130	-21422	-	TSC_hg19_v1_chr19_-_51893838 BC085012 BC143997 BC043532 NM_001193623	-48545	-	BC074916 BC074917 BC126139 AF340019 BC069430 AF340020 NM_001161748 NM_030657	-51173	-	AF310234 AK290412 AF195092 AF223403 BC053319 AK290149 AK295589 NM_014442	19307	-	NM_001080405	37467	+	NM_033329	61276	-	AK289900|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF310233|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY358337|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK290542|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK294185|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303514|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303717|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC101725|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143497|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143500|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF301007|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK292025|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK308982|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY032685|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF311905|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171156|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171157|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171158|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171159|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171160|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171161|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_033130|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC085012|LOC147646|147646|uncharacterized LOC147646##BC043532|LOC147646|147646|uncharacterized LOC147646##NM_001193623|LOC147646|147646|uncharacterized LOC147646##BC074916|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC074917|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC126139|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340019|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC069430|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340020|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_001161748|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_030657|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF310234|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290412|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF195092|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF223403|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##BC053319|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290149|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK295589|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_014442|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_001080405|CEACAM18|729767|carcinoembryonic antigen-related cell adhesion molecule 18##NM_033329|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)	0.548445	CTCF.p2:18:0.548
chr3	153313130	153313252	reg1020913.p2	6.877	+	AF086445 NM_001101337	-110908	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-433143	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-433165	+	AK127282 NM_001251962	525600	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	526011	+	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	729069	-	AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36	0.740363	CTCF.p2:-1:0.740
chr5	158758467	158758585	reg1019520.p1	6.877	+	BC074723 M65272 NM_002187	-1052	-	TSC_hg19_v1_chr5_+_158690297 AY444562 AK057996 BC013425	-68240	+	NM_145049	-68438	+	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	585299	+	TSC_hg19_v1_chr5_+_159436145 AK315262	677621	+	AK222641 TSC_hg19_v1_chr5_+_159436161 AK222984 NM_003314 U46570	677641	+	BC074723|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##M65272|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_002187|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##AY444562|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK057996|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##BC013425|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_145049|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##AK315262|TTC1|7265|tetratricopeptide repeat domain 1##AK222641|TTC1|7265|tetratricopeptide repeat domain 1##AK222984|TTC1|7265|tetratricopeptide repeat domain 1##NM_003314|TTC1|7265|tetratricopeptide repeat domain 1##U46570|TTC1|7265|tetratricopeptide repeat domain 1	0.059501	
chr8	98182981	98183086	reg1019305.p1	6.876	+	TSC_hg19_v1_chr8_+_97657592 AF107834	-525431	+	TSC_hg19_v1_chr8_+_97657589 AK296013	-525447	+	TSC_hg19_v1_chr8_+_97657537 BC020689 NM_016134 AK075132 AK304008 AK315447	-525539	+	CU692280 AB384285 AB051537 TSC_hg19_v1_chr8_-_98290135	107075	-	TSC_hg19_v1_chr8_-_98290171 BC045630 NM_033512	107140	-	TSC_hg19_v1_chr8_-_98290193 AK091445 AX746987	107186	-	AF107834|PGCP|10404|plasma glutamate carboxypeptidase##AK296013|PGCP|10404|plasma glutamate carboxypeptidase##BC020689|PGCP|10404|plasma glutamate carboxypeptidase##NM_016134|PGCP|10404|plasma glutamate carboxypeptidase##AK075132|PGCP|10404|plasma glutamate carboxypeptidase##AK304008|PGCP|10404|plasma glutamate carboxypeptidase##AK315447|PGCP|10404|plasma glutamate carboxypeptidase##AB051537|TSPYL5|85453|TSPY-like 5##BC045630|TSPYL5|85453|TSPY-like 5##NM_033512|TSPYL5|85453|TSPY-like 5##AK091445|TSPYL5|85453|TSPY-like 5	0.997986	CTCF.p2:2:0.998
chr2	79219667	79219793	reg1020400.p1	6.875	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	-1470312	-	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-3281679	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-3282011	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	33108	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	95403	-	AK307292 NM_002909 TSC_hg19_v1_chr2_+_79347583	127806	+	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta##AK307292|REG1A|5967|regenerating islet-derived 1 alpha##NM_002909|REG1A|5967|regenerating islet-derived 1 alpha	0.733119	CTCF.p2:3:0.733
chr10	86189810	86189935	reg1022815.p1	6.874	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-5177	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-58254	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-101478	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	1936391	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	2091622	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	2091658	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.959909	CTCF.p2:-8:0.960
chr12	7798136	7798236	reg1019435.p2	6.874	+	DQ058615 TSC_hg19_v1_chr12_-_7656374 BC051281 AK226017 Z22968 Z22969 Z22970 Z22971 NM_004244 NM_203416	-141836	-	GQ397482 AY358856 AK303372 AF264014 NM_174941 BC104962 BC104964	-201449	-	NM_001080454	-341259	+	U72890 L25877 U72891 BC101405 BC101404 BC101972 BC096158 BC096159 BC096160 BC096161 BC101973 BC144708 NM_001644	20298	-	CU689052 DQ892661 DQ895901 AF110641 AF263538 NM_020634 BC030959 AY358875	50170	-	AY317075 NM_199286 BC125145	65887	+	DQ058615|CD163|9332|CD163 molecule##BC051281|CD163|9332|CD163 molecule##AK226017|CD163|9332|CD163 molecule##Z22968|CD163|9332|CD163 molecule##Z22969|CD163|9332|CD163 molecule##Z22970|CD163|9332|CD163 molecule##Z22971|CD163|9332|CD163 molecule##NM_004244|CD163|9332|CD163 molecule##NM_203416|CD163|9332|CD163 molecule##GQ397482|CD163L1|283316|CD163 molecule-like 1##AK303372|CD163L1|283316|CD163 molecule-like 1##AF264014|CD163L1|283316|CD163 molecule-like 1##NM_174941|CD163L1|283316|CD163 molecule-like 1##BC104962|CD163L1|283316|CD163 molecule-like 1##BC104964|CD163L1|283316|CD163 molecule-like 1##NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4##U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##DQ892661|GDF3|9573|growth differentiation factor 3##DQ895901|GDF3|9573|growth differentiation factor 3##AF110641|GDF3|9573|growth differentiation factor 3##AF263538|GDF3|9573|growth differentiation factor 3##NM_020634|GDF3|9573|growth differentiation factor 3##BC030959|GDF3|9573|growth differentiation factor 3##AY358875|GDF3|9573|growth differentiation factor 3##AY317075|DPPA3|359787|developmental pluripotency associated 3##NM_199286|DPPA3|359787|developmental pluripotency associated 3##BC125145|STELLAR|400206|developmental pluripotency associated 3 pseudogene	0.241622	CTCF.p2:-7:0.228
chr13	41959412	41959518	reg1019399.p1	6.874	+	NM_001110798 NM_018527 NM_024561 TSC_hg19_v1_chr13_+_41885376 BC064592 BC032318 AK291248 AK097224 BX640665 BC101719 BC101721 BC143506 CU689326	-73963	+	AK055086 AF072934 TSC_hg19_v1_chr13_-_41837713 BC027731 BC038427 BC042196 BC065496 NM_004294 AK294343	-121785	-	TSC_hg19_v1_chr13_-_41768706 AK299614 AL136782 AK315589 BC022033 FJ150424 NM_032138 AK091344 AX746923	-190840	-	TSC_hg19_v1_chr13_+_42031539 NM_014059	72086	+	TSC_hg19_v1_chr13_+_42031685 BC066334	72218	+	TSC_hg19_v1_chr13_+_42031690 BC038706 AF036549	72235	+	NM_001110798|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_018527|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_024561|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC064592|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC032318|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK291248|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK097224|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BX640665|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101719|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101721|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC143506|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK055086|MTRF1|9617|mitochondrial translational release factor 1##AF072934|MTRF1|9617|mitochondrial translational release factor 1##BC027731|MTRF1|9617|mitochondrial translational release factor 1##BC038427|MTRF1|9617|mitochondrial translational release factor 1##BC042196|MTRF1|9617|mitochondrial translational release factor 1##BC065496|MTRF1|9617|mitochondrial translational release factor 1##NM_004294|MTRF1|9617|mitochondrial translational release factor 1##AK294343|MTRF1|9617|mitochondrial translational release factor 1##AK299614|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AL136782|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK315589|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##BC022033|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##FJ150424|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_032138|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK091344|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15##BC066334|C13orf15|28984|chromosome 13 open reading frame 15##BC038706|C13orf15|28984|chromosome 13 open reading frame 15##AF036549|C13orf15|28984|chromosome 13 open reading frame 15	0.312256	CTCF.p2:0:0.312
chr14	100351810	100351950	reg1023295.p1	6.874	+	TSC_hg19_v1_chr14_+_100259749 AK126980 BX247979 NM_001008707 NM_004434 BC033043 U97018 BC032541 CU689414 DQ891556 DQ894743	-92176	+	AK299812 TSC_hg19_v1_chr14_+_100240040	-111889	+	TSC_hg19_v1_chr14_+_100204058 AK307925	-147830	+	TSC_hg19_v1_chr14_+_100438137 AK289720 BC023997	86274	+	AK295919 TSC_hg19_v1_chr14_+_100485800	133879	+	TSC_hg19_v1_chr14_+_100531758 NM_016337 AK301379	179872	+	AK126980|EML1|2009|echinoderm microtubule associated protein like 1##BX247979|EML1|2009|echinoderm microtubule associated protein like 1##NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1##NM_004434|EML1|2009|echinoderm microtubule associated protein like 1##BC033043|EML1|2009|echinoderm microtubule associated protein like 1##U97018|EML1|2009|echinoderm microtubule associated protein like 1##BC032541|EML1|2009|echinoderm microtubule associated protein like 1##DQ891556|EML1|2009|echinoderm microtubule associated protein like 1##DQ894743|EML1|2009|echinoderm microtubule associated protein like 1##AK299812|EML1|2009|echinoderm microtubule associated protein like 1##AK307925|EML1|2009|echinoderm microtubule associated protein like 1##AK289720|EVL|51466|Enah/Vasp-like##BC023997|EVL|51466|Enah/Vasp-like##AK295919|EVL|51466|Enah/Vasp-like##NM_016337|EVL|51466|Enah/Vasp-like##AK301379|EVL|51466|Enah/Vasp-like	0.0	
chr19	46282541	46282711	reg1020509.p2	6.874	+	NM_175875	-10130	-	AB464211 TSC_hg19_v1_chr19_-_46272110	-10511	-	TSC_hg19_v1_chr19_-_46234155 NM_001080469	-48479	-	TSC_hg19_v1_chr19_-_46283281 AB384925	672	-	AK304749 M87312 NM_001081563	1185	-	S72883 TSC_hg19_v1_chr19_-_46285728 BC062553 L19268	3066	-	NM_175875|SIX5|147912|SIX homeobox 5##NM_001080469|FBXO46|23403|F-box protein 46##AK304749|DMPK|1760|dystrophia myotonica-protein kinase##M87312|DMPK|1760|dystrophia myotonica-protein kinase##NM_001081563|DMPK|1760|dystrophia myotonica-protein kinase##S72883|DMPK|1760|dystrophia myotonica-protein kinase##BC062553|DMPK|1760|dystrophia myotonica-protein kinase##L19268|DMPK|1760|dystrophia myotonica-protein kinase	0.013337	
chr6	34605998	34606108	reg1021118.p1	6.874	+	AB031549 BC021299 AF071538 AK301543 NM_001252294 NM_012391	-81957	-	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	-123399	+	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	-172149	+	TSC_hg19_v1_chr6_-_34664565 AK313410 BC002328 BC010184 AK056964 BC075810	58493	-	TSC_hg19_v1_chr6_-_34664631 NM_022758 NM_024294	58573	-	NM_003093	118817	+	AB031549|SPDEF|25803|SAM pointed domain containing ets transcription factor##BC021299|SPDEF|25803|SAM pointed domain containing ets transcription factor##AF071538|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK301543|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_001252294|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_012391|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK313410|C6orf106|64771|chromosome 6 open reading frame 106##BC002328|C6orf106|64771|chromosome 6 open reading frame 106##BC010184|C6orf106|64771|chromosome 6 open reading frame 106##AK056964|C6orf106|64771|chromosome 6 open reading frame 106##BC075810|C6orf106|64771|chromosome 6 open reading frame 106##NM_022758|C6orf106|64771|chromosome 6 open reading frame 106##NM_024294|C6orf106|64771|chromosome 6 open reading frame 106##NM_003093|SNRPC|6631|small nuclear ribonucleoprotein polypeptide C	0.996966	CTCF.p2:-20:0.892
chr7	87193698	87193811	reg1020116.p1	6.874	+	M23234 NM_000443 NM_018849 NM_018850 BC042531	-88740	-	TSC_hg19_v1_chr7_+_86975006 NM_001143935 NM_001243745 NM_021151 AK127901 AK313487 BC051874 BC039004 BC012483 BC019226 AF073770 AF168793	-218760	+	BT009845 CR542141 BC061927 TSC_hg19_v1_chr7_-_86974833 BC103631 AB007457 AB007458 BC002709 AK292782 AB007455 AB007456 BC068535	-218982	-	TSC_hg19_v1_chr7_-_87230197 AF016535 BC130424	36525	-	TSC_hg19_v1_chr7_+_87257708 AK055233 NM_001134405 NM_001134406 NM_138290 BC022520 AK293607 AK294039	64063	+	AF345623 AF345624 AY425005 AY425006 M14758 AF345625 AK290159 NM_000927 AY425007 AY452673	148893	-	M23234|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_000443|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018849|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018850|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##BC042531|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_001143935|CROT|54677|carnitine O-octanoyltransferase##NM_001243745|CROT|54677|carnitine O-octanoyltransferase##NM_021151|CROT|54677|carnitine O-octanoyltransferase##AK127901|CROT|54677|carnitine O-octanoyltransferase##AK313487|CROT|54677|carnitine O-octanoyltransferase##BC051874|CROT|54677|carnitine O-octanoyltransferase##BC039004|CROT|54677|carnitine O-octanoyltransferase##BC012483|CROT|54677|carnitine O-octanoyltransferase##BC019226|CROT|54677|carnitine O-octanoyltransferase##AF073770|CROT|54677|carnitine O-octanoyltransferase##AF168793|CROT|54677|carnitine O-octanoyltransferase##BT009845|TP53TG1|11257|TP53 target 1 (non-protein coding)##CR542141|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC061927|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC103631|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007457|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007458|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC002709|TP53TG1|11257|TP53 target 1 (non-protein coding)##AK292782|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007455|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007456|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC068535|TP53TG1|11257|TP53 target 1 (non-protein coding)##AF016535|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##BC130424|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK055233|RUNDC3B|154661|RUN domain containing 3B##NM_001134405|RUNDC3B|154661|RUN domain containing 3B##NM_001134406|RUNDC3B|154661|RUN domain containing 3B##NM_138290|RUNDC3B|154661|RUN domain containing 3B##BC022520|RUNDC3B|154661|RUN domain containing 3B##AK293607|RUNDC3B|154661|RUN domain containing 3B##AK294039|RUNDC3B|154661|RUN domain containing 3B##AY425005|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AY425006|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##M14758|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AF345625|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK290159|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##NM_000927|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AY425007|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	0.990934	CTCF.p2:12:0.991
chrX	84799747	84799881	reg1020211.p1	6.874	+	TSC_hg19_v1_chrX_-_84634749 AF309774 NM_024921	-165065	-	TSC_hg19_v1_chrX_-_84634671 AK314295 AK025039 AK290360 BC017500	-165118	-	TSC_hg19_v1_chrX_-_84634396 DQ892227	-165387	-	AK299323 BC032237 BC130494 BC130496 AK291160 AK312443 NM_000390 NM_001145414 X78121	502737	-	TSC_hg19_v1_chrX_+_85403454 AK290596 NM_001139514 NM_053281	603638	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	603651	+	AF309774|POF1B|79983|premature ovarian failure, 1B##NM_024921|POF1B|79983|premature ovarian failure, 1B##AK314295|POF1B|79983|premature ovarian failure, 1B##AK025039|POF1B|79983|premature ovarian failure, 1B##AK290360|POF1B|79983|premature ovarian failure, 1B##BC017500|POF1B|79983|premature ovarian failure, 1B##DQ892227|POF1B|79983|premature ovarian failure, 1B##AK299323|CHM|1121|choroideremia (Rab escort protein 1)##BC032237|CHM|1121|choroideremia (Rab escort protein 1)##BC130494|CHM|1121|choroideremia (Rab escort protein 1)##BC130496|CHM|1121|choroideremia (Rab escort protein 1)##AK291160|CHM|1121|choroideremia (Rab escort protein 1)##AK312443|CHM|1121|choroideremia (Rab escort protein 1)##NM_000390|CHM|1121|choroideremia (Rab escort protein 1)##NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)##X78121|CHM|1121|choroideremia (Rab escort protein 1)##AK290596|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139514|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_053281|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)	0.524034	CTCF.p2:30:0.524
chr17	15456411	15456524	reg1020939.p1	6.873	+	BC029542 NM_001204477	-85543	-	AF334676 AK223534 BC031688 AK314327 AK057390 NM_031898	-211540	-	BC091499 D11428 NM_000304 TSC_hg19_v1_chr17_-_15168644	-287849	-	TSC_hg19_v1_chr17_-_15466802 BC011952 AK303475 AB074181 AK310363 NM_001135036 NM_001204478 NM_145301	10391	-	AK057407 NM_006382	66550	-	BC001564 CR457136 EU446937 HQ257965 AK002035 AK314557 TSC_hg19_v1_chr17_-_15554961 AB209899	98420	-	BC029542|CDRT4|284040|CMT1A duplicated region transcript 4##NM_001204477|CDRT4|284040|CMT1A duplicated region transcript 4##AF334676|TEKT3|64518|tektin 3##AK223534|TEKT3|64518|tektin 3##BC031688|TEKT3|64518|tektin 3##AK314327|TEKT3|64518|tektin 3##AK057390|TEKT3|64518|tektin 3##NM_031898|TEKT3|64518|tektin 3##BC091499|PMP22|5376|peripheral myelin protein 22##D11428|PMP22|5376|peripheral myelin protein 22##NM_000304|PMP22|5376|peripheral myelin protein 22##BC011952|FAM18B2|201158|family with sequence similarity 18, member B2##AK303475|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 readthrough##AB074181|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 readthrough##AK310363|FAM18B2|201158|family with sequence similarity 18, member B2##NM_001135036|FAM18B2|201158|family with sequence similarity 18, member B2##NM_001204478|FAM18B2-CDRT4|100533496|FAM18B2-CDRT4 readthrough##NM_145301|FAM18B2|201158|family with sequence similarity 18, member B2##AK057407|CDRT1|374286|CMT1A duplicated region transcript 1##NM_006382|CDRT1|374286|CMT1A duplicated region transcript 1##BC001564|TRIM16|10626|tripartite motif containing 16##CR457136|TRIM16|10626|tripartite motif containing 16##EU446937|TRIM16|10626|tripartite motif containing 16##HQ257965|TRIM16|10626|tripartite motif containing 16##AK002035|TRIM16|10626|tripartite motif containing 16##AK314557|TRIM16|10626|tripartite motif containing 16	0.912968	CTCF.p2:-25:0.913
chr6	27763714	27763867	reg1020506.p1	6.873	+	TSC_hg19_v1_chr6_-_27440879 BC022992 AK123011 AK312804 NM_007149	-323089	-	TSC_hg19_v1_chr6_+_27356537 NM_001076781 AK092633 AK294965 AX747641 BC132797	-407235	+	AF352327 AF336874 BC107050 NM_032030	-471232	+	EU446971 TSC_hg19_v1_chr6_-_27775708 NM_003519 AK312114 BC093759 BC093761	11933	-	BC112254 BC112256 TSC_hg19_v1_chr6_+_27775950 AK311766 BC062305 NM_003509 HQ258047	12151	+	BC007518 TSC_hg19_v1_chr6_+_27777828 AK311991 NM_003536 EU446975 BC096128 BC096129 BC096130 BC143046 BC148243 BC148250	13992	+	BC022992|ZNF184|7738|zinc finger protein 184##AK123011|ZNF184|7738|zinc finger protein 184##AK312804|ZNF184|7738|zinc finger protein 184##NM_007149|ZNF184|7738|zinc finger protein 184##NM_001076781|ZNF391|346157|zinc finger protein 391##AK092633|ZNF391|346157|zinc finger protein 391##AK294965|ZNF391|346157|zinc finger protein 391##BC132797|ZNF391|346157|zinc finger protein 391##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83##EU446971|HIST1H2BL|8340|histone cluster 1, H2bl##NM_003519|HIST1H2BL|8340|histone cluster 1, H2bl##AK312114|HIST1H2BL|8340|histone cluster 1, H2bl##BC093759|HIST1H2BL|8340|histone cluster 1, H2bl##BC093761|HIST1H2BL|8340|histone cluster 1, H2bl##BC112254|HIST1H2AI|8329|histone cluster 1, H2ai##BC112256|HIST1H2AI|8329|histone cluster 1, H2ai##AK311766|HIST1H2AI|8329|histone cluster 1, H2ai##BC062305|HIST1H3F|8968|histone cluster 1, H3f##NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai##HQ258047|HIST1H2AM|8336|histone cluster 1, H2am##BC007518|HIST1H3H|8357|histone cluster 1, H3h##AK311991|HIST1H3H|8357|histone cluster 1, H3h##NM_003536|HIST1H3H|8357|histone cluster 1, H3h##EU446975|HIST1H3H|8357|histone cluster 1, H3h##BC096128|HIST1H3H|8357|histone cluster 1, H3h##BC096129|HIST1H3H|8357|histone cluster 1, H3h##BC096130|HIST1H3H|8357|histone cluster 1, H3h##BC143046|HIST1H3H|8357|histone cluster 1, H3h##BC148243|HIST1H3H|8357|histone cluster 1, H3h##BC148250|HIST1H3H|8357|histone cluster 1, H3h	0.957346	CTCF.p2:35:0.957
chr7	94819932	94820036	reg1020570.p2	6.873	+	NM_001166161 NM_001166162 NM_001166163	-280775	+	TSC_hg19_v1_chr7_+_94536986 NM_001166160 NM_017650 AK096514 BC150636	-283018	+	TSC_hg19_v1_chr7_+_94297448 AF038197	-522532	+	M63013 AB528644 M63012 S64615 TSC_hg19_v1_chr7_-_94953802 AK314027 BC074719	133790	-	TSC_hg19_v1_chr7_-_94953845 D84371 U53784 Z70723 NM_000446	133871	-	L48516 AF320003 AF329433 CU687094 TSC_hg19_v1_chr7_-_95025687 AK301772 BC070374 AK304282 NM_000940	205672	-	NM_001166161|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166162|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166163|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166160|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_017650|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##AK096514|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##BC150636|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##AF038197|PEG10|23089|paternally expressed 10##M63013|PON1|5444|paraoxonase 1##M63012|PON1|5444|paraoxonase 1##S64615|PON1|5444|paraoxonase 1##AK314027|PON1|5444|paraoxonase 1##BC074719|PON1|5444|paraoxonase 1##D84371|PON1|5444|paraoxonase 1##U53784|PON1|5444|paraoxonase 1##Z70723|PON1|5444|paraoxonase 1##NM_000446|PON1|5444|paraoxonase 1##L48516|PON3|5446|paraoxonase 3##AF320003|PON3|5446|paraoxonase 3##AF329433|PON3|5446|paraoxonase 3##BC070374|PON3|5446|paraoxonase 3##AK304282|PON3|5446|paraoxonase 3##NM_000940|PON3|5446|paraoxonase 3	0.565256	CTCF.p2:-8:0.565
chr11	124616591	124616743	reg1020823.p1	6.872	+	TSC_hg19_v1_chr11_+_124609854 Y09689 BC002835 BT007325	-6757	+	TSC_hg19_v1_chr11_+_124609837 NM_001126181 NM_006176 U89165	-6860	+	AF300796 NM_001199922	-70469	-	EU176386 EU176732 TSC_hg19_v1_chr11_-_124622053	5376	-	TSC_hg19_v1_chr11_-_124622090 AK000460 BC007313 NM_014312	5429	-	AY358897 TSC_hg19_v1_chr11_-_124622152 BC012567	5484	-	Y09689|NRGN|4900|neurogranin (protein kinase C substrate, RC3)##BC002835|NRGN|4900|neurogranin (protein kinase C substrate, RC3)##BT007325|NRGN|4900|neurogranin (protein kinase C substrate, RC3)##NM_001126181|NRGN|4900|neurogranin (protein kinase C substrate, RC3)##NM_006176|NRGN|4900|neurogranin (protein kinase C substrate, RC3)##U89165|NRGN|4900|neurogranin (protein kinase C substrate, RC3)##AF300796|SIAE|54414|sialic acid acetylesterase##NM_001199922|SIAE|54414|sialic acid acetylesterase##EU176386|VSIG2|23584|V-set and immunoglobulin domain containing 2##EU176732|VSIG2|23584|V-set and immunoglobulin domain containing 2##AK000460|VSIG2|23584|V-set and immunoglobulin domain containing 2##BC007313|VSIG2|23584|V-set and immunoglobulin domain containing 2##NM_014312|VSIG2|23584|V-set and immunoglobulin domain containing 2##AY358897|VSIG2|23584|V-set and immunoglobulin domain containing 2##BC012567|VSIG2|23584|V-set and immunoglobulin domain containing 2	0.053019	
chr20	48150895	48151021	reg1020681.p2	6.872	+	BC110572 BC110573 NM_004975	-51779	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-255763	+	TSC_hg19_v1_chr20_+_47895176 BC042807 CR936805	-255786	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	33731	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	179272	-	AB004550 TSC_hg19_v1_chr20_-_48330359	179398	-	BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC042807|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##CR936805|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.76143	CTCF.p2:1:0.761
chr2	242089914	242090033	reg1019844.p2	6.872	+	AK294043 TSC_hg19_v1_chr2_+_242089896 BC013001 BC000910 NM_002712 Z50749 BC012397 AB385583 BT007296 BT020134	-82	+	CR749231 NM_001252120	-580	-	AK308015 BC051689 TSC_hg19_v1_chr2_+_242089094	-915	+	AY617079 AY617080 NM_001001666 NM_001001891	37950	+	TSC_hg19_v1_chr2_-_242212216 M64098	122247	-	TSC_hg19_v1_chr2_-_242212245 AK300312 NM_001243900 NM_203346	122271	-	AK294043|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC013001|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC000910|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##NM_002712|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##Z50749|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC012397|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT007296|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT020134|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##CR749231|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252120|PASK|23178|PAS domain containing serine/threonine kinase##AK308015|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC051689|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##AY617079|ANO7|50636|anoctamin 7##AY617080|ANO7|50636|anoctamin 7##NM_001001666|ANO7|50636|anoctamin 7##NM_001001891|ANO7|50636|anoctamin 7##M64098|HDLBP|3069|high density lipoprotein binding protein##AK300312|HDLBP|3069|high density lipoprotein binding protein##NM_001243900|HDLBP|3069|high density lipoprotein binding protein##NM_203346|HDLBP|3069|high density lipoprotein binding protein	0.038367	
chr8	11764672	11764785	reg1019653.p2	6.872	+	TSC_hg19_v1_chr8_-_11725628 NM_001908 NM_147780 NM_147781 NM_147782 NM_147783	-39030	-	TSC_hg19_v1_chr8_-_11725624 AK075393	-39104	-	AK092070 AK130184 AK290239 AK297687 BC095408 TSC_hg19_v1_chr8_-_11725597 AK296845 BX647952	-39131	-	AY621333 DQ012026 NM_001033018	67379	-	AY621332 DQ012025 NM_001033017	75101	+	AY621331 DQ012024 NM_001033019 BC130461 BC130463	89061	-	NM_001908|CTSB|1508|cathepsin B##NM_147780|CTSB|1508|cathepsin B##NM_147781|CTSB|1508|cathepsin B##NM_147782|CTSB|1508|cathepsin B##NM_147783|CTSB|1508|cathepsin B##AK075393|CTSB|1508|cathepsin B##AK092070|CTSB|1508|cathepsin B##AK130184|CTSB|1508|cathepsin B##AK290239|CTSB|1508|cathepsin B##AK297687|CTSB|1508|cathepsin B##BC095408|CTSB|1508|cathepsin B##AK296845|CTSB|1508|cathepsin B##BX647952|CTSB|1508|cathepsin B##AY621333|DEFB136|613210|defensin, beta 136##DQ012026|DEFB136|613210|defensin, beta 136##NM_001033018|DEFB136|613210|defensin, beta 136##AY621332|DEFB135|613209|defensin, beta 135##DQ012025|DEFB135|613209|defensin, beta 135##NM_001033017|DEFB135|613209|defensin, beta 135##AY621331|DEFB134|613211|defensin, beta 134##DQ012024|DEFB134|613211|defensin, beta 134##NM_001033019|DEFB134|613211|defensin, beta 134##BC130461|DEFB134|613211|defensin, beta 134##BC130463|DEFB134|613211|defensin, beta 134	0.740157	CTCF.p2:-1:0.740
chr10	128192784	128192897	reg1016870.p1	6.871	+	TSC_hg19_v1_chr10_-_128077075 NM_003474 NM_021641	-115741	-	TSC_hg19_v1_chr10_-_128077062 BC060804	-115776	-	AY358878 AF023476 AF023477 TSC_hg19_v1_chr10_-_128077049 AK127856	-115809	-	BC140898 BC146869 AK057500 NM_001004298	17162	-	TSC_hg19_v1_chr10_+_128594020 NM_001380 BC144632 BC146857 D50857	401191	+	AK127465 NM_001039762	801581	-	NM_003474|ADAM12|8038|ADAM metallopeptidase domain 12##NM_021641|ADAM12|8038|ADAM metallopeptidase domain 12##BC060804|ADAM12|8038|ADAM metallopeptidase domain 12##AY358878|ADAM12|8038|ADAM metallopeptidase domain 12##AF023476|ADAM12|8038|ADAM metallopeptidase domain 12##AF023477|ADAM12|8038|ADAM metallopeptidase domain 12##AK127856|ADAM12|8038|ADAM metallopeptidase domain 12##BC140898|C10orf90|118611|chromosome 10 open reading frame 90##BC146869|C10orf90|118611|chromosome 10 open reading frame 90##AK057500|C10orf90|118611|chromosome 10 open reading frame 90##NM_001004298|C10orf90|118611|chromosome 10 open reading frame 90##NM_001380|DOCK1|1793|dedicator of cytokinesis 1##BC144632|DOCK1|1793|dedicator of cytokinesis 1##BC146857|DOCK1|1793|dedicator of cytokinesis 1##D50857|DOCK1|1793|dedicator of cytokinesis 1##AK127465|FAM196A|642938|family with sequence similarity 196, member A##NM_001039762|FAM196A|642938|family with sequence similarity 196, member A	0.077949	
chr12	108306643	108306751	reg1017221.p2	6.871	+	AY238895 NM_203436	-138536	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-151696	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	-151787	-	BC110330 AB018332 NM_014653	216790	+	NM_001142345	407741	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	426387	-	AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1	0.943546	CTCF.p2:3:0.914
chr10	59825117	59825239	reg1022152.p1	6.870	+	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	-1704152	-	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	-1704164	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	-2466404	+	TSC_hg19_v1_chr10_-_60027655 BC016612 BC065709 NM_152230	202483	-	BC005962 TSC_hg19_v1_chr10_+_60028929 NM_018464 BC059168 AF220049 BC008474 BC007043 AY960578 AK312017	203768	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	269658	+	AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##BC016612|IPMK|253430|inositol polyphosphate multikinase##BC065709|IPMK|253430|inositol polyphosphate multikinase##NM_152230|IPMK|253430|inositol polyphosphate multikinase##BC005962|CISD1|55847|CDGSH iron sulfur domain 1##NM_018464|CISD1|55847|CDGSH iron sulfur domain 1##BC059168|CISD1|55847|CDGSH iron sulfur domain 1##AF220049|CISD1|55847|CDGSH iron sulfur domain 1##BC008474|CISD1|55847|CDGSH iron sulfur domain 1##BC007043|CISD1|55847|CDGSH iron sulfur domain 1##AY960578|CISD1|55847|CDGSH iron sulfur domain 1##AK312017|CISD1|55847|CDGSH iron sulfur domain 1##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	0.988545	CTCF.p2:15:0.989
chr4	171638158	171638280	reg1020606.p2	6.870	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-626805	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-627021	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-690714	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	1096425	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	2451733	+	BC043556 TSC_hg19_v1_chr4_-_174090314	2452091	-	BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.095557	
chr9	117152483	117152584	reg1021102.p1	6.870	+	AY703041 AY703042 AK131082 AK160382 TSC_hg19_v1_chr9_-_117150263 AB075848	-2243	-	BC042202 TSC_hg19_v1_chr9_-_117111294	-41244	-	NM_000608 AK312226 BC015964 BC056239 AK303760 CR456930 CU677539	-60407	+	AY703040 BC055285 NM_030767	4151	-	AY703039 AK126136 TSC_hg19_v1_chr9_-_117160753	8218	-	AL110228 NM_001083885	112940	-	AY703041|AKNA|80709|AT-hook transcription factor##AY703042|AKNA|80709|AT-hook transcription factor##AK131082|AKNA|80709|AT-hook transcription factor##AK160382|AKNA|80709|AT-hook transcription factor##AB075848|AKNA|80709|AT-hook transcription factor##BC042202|AKNA|80709|AT-hook transcription factor##NM_000608|ORM2|5005|orosomucoid 2##AK312226|ORM2|5005|orosomucoid 2##BC015964|ORM2|5005|orosomucoid 2##BC056239|ORM2|5005|orosomucoid 2##AK303760|ORM2|5005|orosomucoid 2##CR456930|ORM2|5005|orosomucoid 2##AY703040|AKNA|80709|AT-hook transcription factor##BC055285|AKNA|80709|AT-hook transcription factor##NM_030767|AKNA|80709|AT-hook transcription factor##AY703039|AKNA|80709|AT-hook transcription factor##AK126136|AKNA|80709|AT-hook transcription factor##AL110228|DFNB31|25861|deafness, autosomal recessive 31##NM_001083885|DFNB31|25861|deafness, autosomal recessive 31	0.222066	CTCF.p2:12:0.211
chr16	21828526	21828653	reg1020233.p1	6.869	+	AK093062 AX747895 NM_170664 BC040551 AK302733	-112272	+	AK125840 NM_001161683	-132840	+	BC129993 NM_144672 BC129992	-138754	+	BC009198 BC068999 TSC_hg19_v1_chr16_-_21831777 BC070157	3171	-	AK316459 AK296301 AK303500 AK301703 AK294452 TSC_hg19_v1_chr16_-_21854901	26239	-	NM_003366 AK307535 TSC_hg19_v1_chr16_+_21964618	136039	+	AK093062|OTOA|146183|otoancorin##NM_170664|OTOA|146183|otoancorin##BC040551|OTOA|146183|otoancorin##AK302733|OTOA|146183|otoancorin##AK125840|OTOA|146183|otoancorin##NM_001161683|OTOA|146183|otoancorin##BC129993|OTOA|146183|otoancorin##NM_144672|OTOA|146183|otoancorin##BC129992|OTOA|146183|otoancorin##BC009198|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC068999|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC070157|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##AK316459|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296301|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AK303500|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK301703|LOC613037|613037|nuclear pore complex interacting protein pseudogene##AK294452|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_003366|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##AK307535|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II	0.701118	CTCF.p2:-31:0.701
chr17	47653113	47653206	reg1019118.p1	6.869	+	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	-80471	+	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	-160911	-	BC095460 TSC_hg19_v1_chr17_-_47492215	-160944	-	TSC_hg19_v1_chr17_+_47653192 AL834282 NM_007225	77	+	TSC_hg19_v1_chr17_+_47653475 BC022541 AK308928 AY358526 AB385434	368	+	TSC_hg19_v1_chr17_-_47755471 BC003385 AK222589 AK312691 AJ000644 AK303268 AK316366 BC001269 AK293587 AK300616 NM_001007226 NM_001007227 NM_001007228 NM_001007229 NM_001007230 NM_003563	102273	-	AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##BC095460|PHB|5245|prohibitin##AL834282|NXPH3|11248|neurexophilin 3##NM_007225|NXPH3|11248|neurexophilin 3##BC022541|NXPH3|11248|neurexophilin 3##AK308928|NXPH3|11248|neurexophilin 3##AY358526|NXPH3|11248|neurexophilin 3##BC003385|SPOP|8405|speckle-type POZ protein##AK222589|SPOP|8405|speckle-type POZ protein##AK312691|SPOP|8405|speckle-type POZ protein##AJ000644|SPOP|8405|speckle-type POZ protein##AK303268|SPOP|8405|speckle-type POZ protein##AK316366|SPOP|8405|speckle-type POZ protein##BC001269|SPOP|8405|speckle-type POZ protein##AK293587|SPOP|8405|speckle-type POZ protein##AK300616|SPOP|8405|speckle-type POZ protein##NM_001007226|SPOP|8405|speckle-type POZ protein##NM_001007227|SPOP|8405|speckle-type POZ protein##NM_001007228|SPOP|8405|speckle-type POZ protein##NM_001007229|SPOP|8405|speckle-type POZ protein##NM_001007230|SPOP|8405|speckle-type POZ protein##NM_003563|SPOP|8405|speckle-type POZ protein	0.964835	CTCF.p2:-6:0.965
chr14	75271051	75271169	reg1023284.p1	6.868	+	TSC_hg19_v1_chr14_+_75230066 AK095760 NM_019589	-41078	+	TSC_hg19_v1_chr14_+_75179883 NM_015962 AK290666 BC022361 AK021636 BC080600 BX248271	-91235	+	TSC_hg19_v1_chr14_-_75179784 AB002315 AK304217 AK296912 BX248747 BC032944 NM_001039479	-91334	-	TSC_hg19_v1_chr14_+_75283667 BC023570	12590	+	BC105720 BC105721 BC105927 NM_001080408 NM_001243007	59425	-	TSC_hg19_v1_chr14_+_75348624 NM_001244883 NM_001933 AK289414 BX248276 AK299505 AK316463 AK300396 BC000302 BC001922 BC002735 BX248764 D16373 CR456727 CU674146 L37418 BX248774	77515	+	AK095760|YLPM1|56252|YLP motif containing 1##NM_019589|YLPM1|56252|YLP motif containing 1##NM_015962|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK290666|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC022361|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK021636|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC080600|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BX248271|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AB002315|KIAA0317|9870|KIAA0317##AK304217|KIAA0317|9870|KIAA0317##AK296912|KIAA0317|9870|KIAA0317##BX248747|KIAA0317|9870|KIAA0317##BC032944|KIAA0317|9870|KIAA0317##NM_001039479|KIAA0317|9870|KIAA0317##BC023570|YLPM1|56252|YLP motif containing 1##BC105720|PROX2|283571|prospero homeobox 2##BC105721|PROX2|283571|prospero homeobox 2##BC105927|PROX2|283571|prospero homeobox 2##NM_001080408|PROX2|283571|prospero homeobox 2##NM_001243007|PROX2|283571|prospero homeobox 2##NM_001244883|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##NM_001933|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK289414|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248276|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK299505|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK316463|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK300396|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC000302|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC001922|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC002735|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248764|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##D16373|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##CR456727|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##L37418|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248774|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)	0.502291	CTCF.p2:-1:0.502
chr2	128082375	128082501	reg1019833.p1	6.868	+	TSC_hg19_v1_chr2_-_128051744 M31899 NM_000122	-30685	-	TSC_hg19_v1_chr2_-_128051743 AK307338 AK222465 BC008820 AK300250	-30717	-	AK091500 CU679129 DQ893802 EU176179 AB384812 AK095557 AK290474 AK309405 TSC_hg19_v1_chr2_-_128051698	-30761	-	AF234262 AF239798 BC136293 AF111105 NM_006609	18300	-	TSC_hg19_v1_chr2_+_128176007 NM_000312 AK298449 AK303773 AK298280 AK298454 X02750	93564	+	TSC_hg19_v1_chr2_+_128176019 BC034377	93588	+	M31899|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##NM_000122|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK307338|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK222465|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##BC008820|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK300250|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK091500|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##DQ893802|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##EU176179|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK095557|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK290474|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK309405|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AF239798|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##BC136293|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##AF111105|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##NM_006609|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##NM_000312|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298449|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK303773|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298280|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298454|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##X02750|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##BC034377|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)	0.321193	CTCF.p2:-10:0.321
chr22	16201423	16201525	reg1021193.p1	6.868	+	None	None	None	None	None	None	None	None	None	BC127623 AY465171 AY465172 AY466021 NM_001136213	86452	-	NM_001005239	248329	-	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	872095	-	BC127623|POTEG|404785|POTE ankyrin domain family, member G##AY465171|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##AY466021|POTEH|23784|POTE ankyrin domain family, member H##NM_001136213|POTEH|23784|POTE ankyrin domain family, member H##NM_001005239|OR11H1|81061|olfactory receptor, family 11, subfamily H, member 1##BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	0.760895	CTCF.p2:-2:0.761
chr5	134241412	134241532	reg1018762.p2	6.868	+	TSC_hg19_v1_chr5_+_134240837 EU832290 EU832374 AK098495 AF499009	-612	+	TSC_hg19_v1_chr5_+_134240808 BC054021 AL136721 NM_032151	-687	+	TSC_hg19_v1_chr5_+_134210061 BC001615 AK026278 AK225454 AK225462 BC032568 AK307529 BX538131 EU832512 EU832593	-31420	+	BC110384 NM_178019 AK292427 AF432876 BC101692	62143	+	CU679351 AB463996 EU446647 TSC_hg19_v1_chr5_-_134369629 U70370	128153	-	TSC_hg19_v1_chr5_-_134369891 BC009412 AK290635 NM_002653	128437	-	EU832290|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##EU832374|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AK098495|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AF499009|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##BC054021|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AL136721|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##NM_032151|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##BC001615|TXNDC15|79770|thioredoxin domain containing 15##AK026278|TXNDC15|79770|thioredoxin domain containing 15##AK225454|TXNDC15|79770|thioredoxin domain containing 15##AK225462|TXNDC15|79770|thioredoxin domain containing 15##BC032568|TXNDC15|79770|thioredoxin domain containing 15##AK307529|TXNDC15|79770|thioredoxin domain containing 15##BX538131|TXNDC15|79770|thioredoxin domain containing 15##EU832512|TXNDC15|79770|thioredoxin domain containing 15##EU832593|TXNDC15|79770|thioredoxin domain containing 15##BC110384|CATSPER3|347732|cation channel, sperm associated 3##NM_178019|CATSPER3|347732|cation channel, sperm associated 3##AK292427|CATSPER3|347732|cation channel, sperm associated 3##AF432876|CATSPER3|347732|cation channel, sperm associated 3##BC101692|CATSPER3|347732|cation channel, sperm associated 3##EU446647|PITX1|5307|paired-like homeodomain 1##U70370|PITX1|5307|paired-like homeodomain 1##BC009412|PITX1|5307|paired-like homeodomain 1##AK290635|PITX1|5307|paired-like homeodomain 1##NM_002653|PITX1|5307|paired-like homeodomain 1	0.989046	CTCF.p2:11:0.989
chr1	51240579	51240694	reg1020354.p1	6.866	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	-351525	-	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-665098	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-665952	+	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	184941	-	TSC_hg19_v1_chr1_-_51425740 BC067100	185120	-	TSC_hg19_v1_chr1_-_51425796 AJ271408	185163	-	NM_032110|DMRTA2|63950|DMRT-like family A2##AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1##AJ271408|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.980232	CTCF.p2:-6:0.980
chr2	137631991	137632110	reg1020863.p1	6.866	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-108934	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-756374	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-758252	-	NM_001080427	116411	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1089884	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	1627343	+	AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like	0.551721	CTCF.p2:-8:0.552
chr5	134252890	134253007	reg1021555.p1	6.866	+	TSC_hg19_v1_chr5_+_134240837 EU832290 EU832374 AK098495 AF499009	-12088	+	TSC_hg19_v1_chr5_+_134240808 BC054021 AL136721 NM_032151	-12163	+	TSC_hg19_v1_chr5_+_134210061 BC001615 AK026278 AK225454 AK225462 BC032568 AK307529 BX538131 EU832512 EU832593	-42896	+	BC110384 NM_178019 AK292427 AF432876 BC101692	50667	+	CU679351 AB463996 EU446647 TSC_hg19_v1_chr5_-_134369629 U70370	116677	-	TSC_hg19_v1_chr5_-_134369891 BC009412 AK290635 NM_002653	116961	-	EU832290|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##EU832374|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AK098495|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AF499009|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##BC054021|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AL136721|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##NM_032151|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##BC001615|TXNDC15|79770|thioredoxin domain containing 15##AK026278|TXNDC15|79770|thioredoxin domain containing 15##AK225454|TXNDC15|79770|thioredoxin domain containing 15##AK225462|TXNDC15|79770|thioredoxin domain containing 15##BC032568|TXNDC15|79770|thioredoxin domain containing 15##AK307529|TXNDC15|79770|thioredoxin domain containing 15##BX538131|TXNDC15|79770|thioredoxin domain containing 15##EU832512|TXNDC15|79770|thioredoxin domain containing 15##EU832593|TXNDC15|79770|thioredoxin domain containing 15##BC110384|CATSPER3|347732|cation channel, sperm associated 3##NM_178019|CATSPER3|347732|cation channel, sperm associated 3##AK292427|CATSPER3|347732|cation channel, sperm associated 3##AF432876|CATSPER3|347732|cation channel, sperm associated 3##BC101692|CATSPER3|347732|cation channel, sperm associated 3##EU446647|PITX1|5307|paired-like homeodomain 1##U70370|PITX1|5307|paired-like homeodomain 1##BC009412|PITX1|5307|paired-like homeodomain 1##AK290635|PITX1|5307|paired-like homeodomain 1##NM_002653|PITX1|5307|paired-like homeodomain 1	0.977991	CTCF.p2:-3:0.978
chr6	116418297	116418407	reg1013660.p2	6.866	+	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	-36470	-	AF503292 NM_153612 BC093911 BC093913	-2034328	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-2126016	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	3657	+	AK097758 TSC_hg19_v1_chr6_-_116422450	4078	-	BC130621 BC130623 NM_000493	28908	-	BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1##BC130621|COL10A1|1300|collagen, type X, alpha 1##BC130623|COL10A1|1300|collagen, type X, alpha 1##NM_000493|COL10A1|1300|collagen, type X, alpha 1	0.480619	CTCF.p2:-10:0.481
chr19	30897559	30897669	reg1024218.p1	6.865	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	-34234	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	-464332	+	BC026184 NM_001252641	-483064	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	942733	-	FJ211597 NM_001205273	1185572	+	TSC_hg19_v1_chr19_+_32836524 NM_001136156 NM_014910 AK292526 AB029007 BX640881 BC136417 AL713775	1938948	+	BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5##NM_001136156|ZNF507|22847|zinc finger protein 507##NM_014910|ZNF507|22847|zinc finger protein 507##AK292526|ZNF507|22847|zinc finger protein 507##AB029007|ZNF507|22847|zinc finger protein 507##BX640881|ZNF507|22847|zinc finger protein 507##BC136417|ZNF507|22847|zinc finger protein 507##AL713775|ZNF507|22847|zinc finger protein 507	0.202597	CTCF.p2:3:0.203
chr19	38633158	38633322	reg1021504.p1	6.865	+	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	-235328	+	TSC_hg19_v1_chr19_+_38397847 NM_015073	-235383	+	AK302913 AY026504 AK128826 NM_031951	-235966	-	AB463560 GQ358728 BC125152 BC125153 U43843 AK308563 NM_001135155 NM_004647	81595	-	BC021191 TSC_hg19_v1_chr19_-_38720320 NM_001135156	87076	-	TSC_hg19_v1_chr19_-_38720336 AK297581	87094	-	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##AK302913|WDR87|83889|WD repeat domain 87##AY026504|WDR87|83889|WD repeat domain 87##AK128826|WDR87|83889|WD repeat domain 87##NM_031951|WDR87|83889|WD repeat domain 87##GQ358728|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125152|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125153|DPF1|8193|D4, zinc and double PHD fingers family 1##U43843|DPF1|8193|D4, zinc and double PHD fingers family 1##AK308563|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135155|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_004647|DPF1|8193|D4, zinc and double PHD fingers family 1##BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1##AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1	0.760899	CTCF.p2:16:0.761
chr5	81470556	81470684	reg1019561.p1	6.865	+	TSC_hg19_v1_chr5_+_81268100 AL136912	-202522	+	AF318326 TSC_hg19_v1_chr5_+_81267992	-202630	+	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	-202775	+	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	103551	-	TSC_hg19_v1_chr5_-_81574219 NM_001025	103599	-	BC093982 BC112191 NM_001017971	130545	+	AL136912|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AF318326|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##NM_001025|RPS23|6228|ribosomal protein S23##BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like	0.994269	CTCF.p2:20:0.994
chr7	38403136	38403268	reg1020677.p2	6.864	+	TSC_hg19_v1_chr7_-_38389583 BC035592	-13613	-	Y00482 TSC_hg19_v1_chr7_-_38389512	-13726	-	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	-27998	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	267760	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	267875	-	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	545591	-	BC035592|TRGV5|6978|T cell receptor gamma variable 5##BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)	0.998956	CTCF.p2:0:0.999
chrX	107827988	107828128	reg1020617.p1	6.864	+	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	-144974	+	BT007228 L22763 U04845 NM_001847 BC005305	-145395	-	BC140855 BC144669 BC000874 BC070203 NM_033641 D21337	-146451	-	NM_003604 AF007567	151564	-	NM_001522 L37378	897227	-	AK023289 NM_018698 BC120984 BC120985	950956	+	BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##BC140855|COL4A6|1288|collagen, type IV, alpha 6##BC144669|COL4A6|1288|collagen, type IV, alpha 6##BC000874|COL4A6|1288|collagen, type IV, alpha 6##BC070203|COL4A6|1288|collagen, type IV, alpha 6##NM_033641|COL4A6|1288|collagen, type IV, alpha 6##D21337|COL4A6|1288|collagen, type IV, alpha 6##NM_003604|IRS4|8471|insulin receptor substrate 4##AF007567|IRS4|8471|insulin receptor substrate 4##NM_001522|GUCY2F|2986|guanylate cyclase 2F, retinal##L37378|GUCY2F|2986|guanylate cyclase 2F, retinal##AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2	0.969731	CTCF.p2:-16:0.970
chr1_gl000192_random	243650	243776	reg1022065.p1	6.863	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr2	220142532	220142646	reg1019870.p1	6.863	+	BC009238 TSC_hg19_v1_chr2_-_220118641 AK054731 NM_006000	-23962	-	TSC_hg19_v1_chr2_+_220110219 AK292694 NM_001008910 AK310793 AK298471 AK225526 AF060798 BC002618 AF203910 AK225392 BC053998 AK096954 AK302182	-32382	+	TSC_hg19_v1_chr2_-_220110167 AY358639 NM_024506 BC028370	-32434	-	TSC_hg19_v1_chr2_+_220144087 AK312723 NM_001039550 NM_006736 AK293888 BC011609 BC040494 AK292761 AK289626	1558	+	TSC_hg19_v1_chr2_-_220173693 AK296335 NM_001199764	31121	-	AK314574 TSC_hg19_v1_chr2_-_220174093 AK294490 BC070053 L18983	31514	-	BC009238|TUBA4A|7277|tubulin, alpha 4a##AK054731|TUBA4A|7277|tubulin, alpha 4a##NM_006000|TUBA4A|7277|tubulin, alpha 4a##AK292694|STK16|8576|serine/threonine kinase 16##NM_001008910|STK16|8576|serine/threonine kinase 16##AK310793|STK16|8576|serine/threonine kinase 16##AK298471|STK16|8576|serine/threonine kinase 16##AK225526|STK16|8576|serine/threonine kinase 16##AF060798|STK16|8576|serine/threonine kinase 16##BC002618|STK16|8576|serine/threonine kinase 16##AF203910|STK16|8576|serine/threonine kinase 16##AK225392|STK16|8576|serine/threonine kinase 16##BC053998|STK16|8576|serine/threonine kinase 16##AK096954|STK16|8576|serine/threonine kinase 16##AK302182|STK16|8576|serine/threonine kinase 16##AY358639|GLB1L|79411|galactosidase, beta 1-like##NM_024506|GLB1L|79411|galactosidase, beta 1-like##BC028370|GLB1L|79411|galactosidase, beta 1-like##AK312723|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##NM_001039550|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##NM_006736|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK293888|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##BC011609|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##BC040494|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK292761|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK289626|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK296335|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##NM_001199764|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK314574|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK294490|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##BC070053|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##L18983|PTPRN|5798|protein tyrosine phosphatase, receptor type, N	0.23988	CTCF.p2:-13:0.240
chr12	53346047	53346149	reg1020181.p1	6.862	+	AK290938 AK315826 TSC_hg19_v1_chr12_-_53343647	-2469	-	AK313988 TSC_hg19_v1_chr12_+_53342904 AK223093 AK129587 BC020982 X12881 BC072017 BC000698 BC000180 BC073757 BC008636 BC004253 AY762101 AB528484 DQ890555 DQ893715 BT019412 X12883	-3161	+	NM_000224 TSC_hg19_v1_chr12_+_53342874	-3237	+	NM_001417 TSC_hg19_v1_chr12_+_53400220	54044	+	TSC_hg19_v1_chr12_+_53400239 AK222528 AK293731 AK299329 AK310244 AK299510 AK299526	54140	+	TSC_hg19_v1_chr12_+_53400249 BC073139 BC073154 BC098437 BC007745 CR627377	54159	+	AK290938|KRT8|3856|keratin 8##AK315826|KRT8|3856|keratin 8##AK313988|KRT18|3875|keratin 18##AK223093|KRT18|3875|keratin 18##AK129587|KRT18|3875|keratin 18##BC020982|KRT18|3875|keratin 18##X12881|KRT18|3875|keratin 18##BC072017|KRT18|3875|keratin 18##BC000698|KRT18|3875|keratin 18##BC000180|KRT18|3875|keratin 18##BC008636|KRT18|3875|keratin 18##BC004253|KRT18|3875|keratin 18##AY762101|KRT18|3875|keratin 18##DQ890555|KRT18|3875|keratin 18##DQ893715|KRT18|3875|keratin 18##BT019412|KRT18|3875|keratin 18##X12883|KRT18|3875|keratin 18##NM_000224|KRT18|3875|keratin 18##NM_001417|EIF4B|1975|eukaryotic translation initiation factor 4B##AK222528|EIF4B|1975|eukaryotic translation initiation factor 4B##AK293731|EIF4B|1975|eukaryotic translation initiation factor 4B##AK299329|EIF4B|1975|eukaryotic translation initiation factor 4B##AK310244|EIF4B|1975|eukaryotic translation initiation factor 4B##AK299510|EIF4B|1975|eukaryotic translation initiation factor 4B##AK299526|EIF4B|1975|eukaryotic translation initiation factor 4B##BC073139|EIF4B|1975|eukaryotic translation initiation factor 4B##BC073154|EIF4B|1975|eukaryotic translation initiation factor 4B##BC098437|EIF4B|1975|eukaryotic translation initiation factor 4B##BC007745|EIF4B|1975|eukaryotic translation initiation factor 4B##CR627377|EIF4B|1975|eukaryotic translation initiation factor 4B	0.890195	CTCF.p2:4:0.890
chr14	74219231	74219350	reg1018856.p2	6.862	+	CR457112 BC039577 AK290980 TSC_hg19_v1_chr14_-_74181085 AF320308 BC007712 NM_006029	-38529	-	NM_001201366 NM_031427 AF542071 BC005343 AL833654 AK315392	-107637	+	DQ082756 NM_001037162	-135743	+	BC015668 TSC_hg19_v1_chr14_-_74226640	7348	-	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	7675	-	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	34629	-	CR457112|PNMA1|9240|paraneoplastic antigen MA1##BC039577|PNMA1|9240|paraneoplastic antigen MA1##AK290980|PNMA1|9240|paraneoplastic antigen MA1##AF320308|PNMA1|9240|paraneoplastic antigen MA1##BC007712|PNMA1|9240|paraneoplastic antigen MA1##NM_006029|PNMA1|9240|paraneoplastic antigen MA1##NM_001201366|DNAL1|83544|dynein, axonemal, light chain 1##NM_031427|DNAL1|83544|dynein, axonemal, light chain 1##AF542071|DNAL1|83544|dynein, axonemal, light chain 1##BC005343|DNAL1|83544|dynein, axonemal, light chain 1##AL833654|DNAL1|83544|dynein, axonemal, light chain 1##AK315392|DNAL1|83544|dynein, axonemal, light chain 1##DQ082756|ACOT6|641372|acyl-CoA thioesterase 6##NM_001037162|ACOT6|641372|acyl-CoA thioesterase 6##BC015668|C14orf43|91748|chromosome 14 open reading frame 43##AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43	0.906732	CTCF.p2:3:0.907
chr3	153008972	153009086	reg1021007.p1	6.862	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-128981	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-129003	+	NM_002563 Z49205	-456294	+	AF086445 NM_001101337	193254	+	AK127282 NM_001251962	829762	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	830173	+	BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26	0.507134	CTCF.p2:4:0.507
chr5	173447534	173447641	reg1018471.p1	6.862	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	-31397	+	TSC_hg19_v1_chr5_+_173315343 NM_030627	-132209	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-403914	-	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	25124	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	25165	+	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	704025	+	NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2	0.197871	
chr8	111842849	111842984	reg1020691.p2	6.862	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-855950	-	NM_001099743 NM_001099744	-1138897	-	AK290469 NM_001099745 NM_001099746	-1149683	-	AB114605 NM_198124	2546465	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	2606213	-	TSC_hg19_v1_chr8_-_116680208 AK304046	4837304	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.94236	CTCF.p2:-20:0.942
chr3	128336421	128336552	reg1013032.p1	6.861	+	AF008192 NM_007354	-41558	-	BC051342 BC002557 NM_032638 BX647499 TSC_hg19_v1_chr3_-_128212044	-124450	-	TSC_hg19_v1_chr3_-_128207374 AK314826 NM_001145661	-129116	-	BC007995 TSC_hg19_v1_chr3_-_128369648 CR456742 AB527671 CU679817	33100	-	TSC_hg19_v1_chr3_-_128369662 AK297941 AK312369 AK296905 CR749284 BC010839 AK223595	33196	-	TSC_hg19_v1_chr3_-_128369724 NM_002950	33252	-	AF008192|C3orf27|23434|chromosome 3 open reading frame 27##NM_007354|C3orf27|23434|chromosome 3 open reading frame 27##BC051342|GATA2|2624|GATA binding protein 2##BC002557|GATA2|2624|GATA binding protein 2##NM_032638|GATA2|2624|GATA binding protein 2##BX647499|GATA2|2624|GATA binding protein 2##AK314826|GATA2|2624|GATA binding protein 2##NM_001145661|GATA2|2624|GATA binding protein 2##BC007995|RPN1|6184|ribophorin I##CR456742|RPN1|6184|ribophorin I##AK297941|RPN1|6184|ribophorin I##AK312369|RPN1|6184|ribophorin I##AK296905|RPN1|6184|ribophorin I##CR749284|RPN1|6184|ribophorin I##BC010839|RPN1|6184|ribophorin I##AK223595|RPN1|6184|ribophorin I##NM_002950|RPN1|6184|ribophorin I	0.39784	CTCF.p2:-17:0.398
chr6	128176833	128176973	reg1025014.p1	6.861	+	AK303850 BC062712 NM_001010905	-278585	+	NM_001012279	-336404	-	NM_014702	-396369	-	AK292046 AK097903 BC144034 BC130516 NM_001010923 NM_001164685	45297	-	AK124031 NM_001164687	62855	-	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	664753	-	AK303850|C6orf58|352999|chromosome 6 open reading frame 58##BC062712|C6orf58|352999|chromosome 6 open reading frame 58##NM_001010905|C6orf58|352999|chromosome 6 open reading frame 58##NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174##NM_014702|KIAA0408|9729|KIAA0408##AK292046|THEMIS|387357|thymocyte selection associated##AK097903|THEMIS|387357|thymocyte selection associated##BC144034|THEMIS|387357|thymocyte selection associated##BC130516|THEMIS|387357|thymocyte selection associated##NM_001010923|THEMIS|387357|thymocyte selection associated##NM_001164685|THEMIS|387357|thymocyte selection associated##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K	0.0	
chr11	45864821	45864931	reg1020376.p1	6.860	+	AK074929 NM_018389 AK027394 AK027747 AK130181 AF326199	-38185	+	TSC_hg19_v1_chr11_+_45825944 AK225428 AK002182 AK091245	-38962	+	NM_001145265 NM_001145266	-39254	+	NM_001127457 AK294904	3795	+	AK302865 NM_021117 TSC_hg19_v1_chr11_+_45869025 AK291260 BC041814 EU219622 CU692042 AB014558	4137	+	NM_005456 TSC_hg19_v1_chr11_+_45907138	42216	+	AK074929|SLC35C1|55343|solute carrier family 35, member C1##NM_018389|SLC35C1|55343|solute carrier family 35, member C1##AK027394|SLC35C1|55343|solute carrier family 35, member C1##AK027747|SLC35C1|55343|solute carrier family 35, member C1##AF326199|SLC35C1|55343|solute carrier family 35, member C1##AK225428|SLC35C1|55343|solute carrier family 35, member C1##AK002182|SLC35C1|55343|solute carrier family 35, member C1##AK091245|SLC35C1|55343|solute carrier family 35, member C1##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1##NM_001127457|CRY2|1408|cryptochrome 2 (photolyase-like)##AK294904|CRY2|1408|cryptochrome 2 (photolyase-like)##AK302865|CRY2|1408|cryptochrome 2 (photolyase-like)##NM_021117|CRY2|1408|cryptochrome 2 (photolyase-like)##AK291260|CRY2|1408|cryptochrome 2 (photolyase-like)##BC041814|CRY2|1408|cryptochrome 2 (photolyase-like)##EU219622|CRY2|1408|cryptochrome 2 (photolyase-like)##AB014558|CRY2|1408|cryptochrome 2 (photolyase-like)##NM_005456|MAPK8IP1|9479|mitogen-activated protein kinase 8 interacting protein 1	0.993158	CTCF.p2:-20:0.993
chr12	128872458	128872592	reg1021101.p1	6.860	+	NM_001136103	-120578	+	NM_052907	-3061364	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-3322457	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	435918	-	BC043528 TSC_hg19_v1_chr12_+_129337985	465459	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	465562	+	NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.998672	CTCF.p2:0:0.999
chr3	23930227	23930368	reg1020649.p1	6.860	+	AK295354 NM_001202476	-78364	+	AK314854 TSC_hg19_v1_chr3_+_23847474	-82823	+	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	-82887	+	NM_001253379 NM_001253384 NM_002948	27997	+	TSC_hg19_v1_chr3_-_23958419 BC012145 BC066940	28143	-	TSC_hg19_v1_chr3_-_23958512 NM_020345	28222	-	NM_001202476|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##AK314854|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_001253379|RPL15|6138|ribosomal protein L15##NM_001253384|RPL15|6138|ribosomal protein L15##NM_002948|RPL15|6138|ribosomal protein L15##BC012145|NKIRAS1|28512|NFKB inhibitor interacting Ras-like 1##BC066940|NKIRAS1|28512|NFKB inhibitor interacting Ras-like 1##NM_020345|NKIRAS1|28512|NFKB inhibitor interacting Ras-like 1	0.542881	CTCF.p2:5:0.543
chrX	23572541	23572701	reg1025688.p1	6.860	+	AK298796 NM_173495 AK054858 BC121061	-219561	+	AY039237 NM_182699 BC067878 BC051703	-554537	+	GQ355336 NM_152577 AK098601 BC074910 BC126190 BC126192 HQ258412 HQ258552	-1281553	+	TSC_hg19_v1_chrX_+_23685615 BC016770	113002	+	TSC_hg19_v1_chrX_+_23685640 BC007107 NM_006406 U25182	113025	+	TSC_hg19_v1_chrX_+_23685665 BC003609 AB590368 DQ893599 DQ895027 CR541668 CR541705	113051	+	AK298796|PTCHD1|139411|patched domain containing 1##NM_173495|PTCHD1|139411|patched domain containing 1##AK054858|PTCHD1|139411|patched domain containing 1##BC121061|PTCHD1|139411|patched domain containing 1##AY039237|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##NM_182699|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC067878|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC051703|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##GQ355336|ZNF645|158506|zinc finger protein 645##NM_152577|ZNF645|158506|zinc finger protein 645##AK098601|ZNF645|158506|zinc finger protein 645##BC074910|ZNF645|158506|zinc finger protein 645##BC126190|ZNF645|158506|zinc finger protein 645##BC126192|ZNF645|158506|zinc finger protein 645##HQ258412|ZNF645|158506|zinc finger protein 645##HQ258552|ZNF645|158506|zinc finger protein 645##BC016770|PRDX4|10549|peroxiredoxin 4##BC007107|PRDX4|10549|peroxiredoxin 4##NM_006406|PRDX4|10549|peroxiredoxin 4##U25182|PRDX4|10549|peroxiredoxin 4##BC003609|PRDX4|10549|peroxiredoxin 4##DQ893599|PRDX4|10549|peroxiredoxin 4##DQ895027|PRDX4|10549|peroxiredoxin 4##CR541668|PRDX4|10549|peroxiredoxin 4##CR541705|PRDX4|10549|peroxiredoxin 4	0.700259	CTCF.p2:-7:0.700
chr4	124581063	124581222	reg1023368.p1	6.859	+	AK026960 BC063856 NM_005841	-260469	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-263186	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-736890	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	1052672	-	NM_024582	1656424	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	3972997	+	AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	0.0	
chr8	144594992	144595105	reg1002583.p2	6.859	+	NM_201589	-82447	-	TSC_hg19_v1_chr8_+_144451016 NM_052924 BC012135 BC025767 AB528055 AY082588 CU693058 AB067516	-143958	+	AF349017 NM_052963 TSC_hg19_v1_chr8_-_144417051	-177993	-	D63484 TSC_hg19_v1_chr8_-_144623602 BC038670	28543	-	TSC_hg19_v1_chr8_-_144623640 NM_015117	28584	-	AK291817 NM_001166237	40508	+	NM_201589|MAFA|389692|v-maf musculoaponeurotic fibrosarcoma oncogene homolog A (avian)##NM_052924|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC012135|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC025767|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AY082588|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AB067516|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AF349017|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_052963|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##D63484|ZC3H3|23144|zinc finger CCCH-type containing 3##BC038670|ZC3H3|23144|zinc finger CCCH-type containing 3##NM_015117|ZC3H3|23144|zinc finger CCCH-type containing 3##AK291817|GSDMD|79792|gasdermin D##NM_001166237|GSDMD|79792|gasdermin D	0.988132	
chr11	11870889	11871020	reg1022862.p1	6.858	+	TSC_hg19_v1_chr11_+_11863521 BC071559 AK027362 AK092290 AX747455	-7386	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	-7463	+	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	-7938	+	AY587550 DQ892906 DQ896157 AK295441 AK225156 TSC_hg19_v1_chr11_-_12030174 AB033421 AF177396 AK092979 AK098756 NM_001018057	159202	-	TSC_hg19_v1_chr11_-_12030604 AB034203	159620	-	TSC_hg19_v1_chr11_-_12030622 BC007660 NM_015881	159671	-	BC071559|USP47|55031|ubiquitin specific peptidase 47##AK027362|USP47|55031|ubiquitin specific peptidase 47##AK092290|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AY587550|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##DQ892906|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##DQ896157|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK295441|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK225156|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AB033421|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AF177396|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK092979|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK098756|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_001018057|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AB034203|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##BC007660|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_015881|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)	0.908228	CTCF.p2:7:0.908
chr12	132638698	132638878	reg1001428.p2	6.858	+	TSC_hg19_v1_chr12_+_132629014 BC071958 CU687200 DQ892518 DQ895730 BC007893	-9732	+	TSC_hg19_v1_chr12_+_132629011 AK074489	-9778	+	TSC_hg19_v1_chr12_+_132629001 BC001191 NM_024078	-9795	+	AF458594 NM_021808	51784	-	BC069354 AB040672 NM_001122636 BC157845 BC171844	267069	-	NM_001142641	428368	+	BC071958|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ892518|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ895730|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC007893|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC001191|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##NM_024078|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001142641|FBRSL1|57666|fibrosin-like 1	0.0	
chr2	238832432	238832533	reg1020728.p2	6.858	+	NM_005855 TSC_hg19_v1_chr2_+_238768265 AJ001014 BC000548 DQ891905 DQ895091 AY265457 CR542032 CR542044	-64230	+	NM_001080504 TSC_hg19_v1_chr2_+_238707424 BX648107	-125062	+	TSC_hg19_v1_chr2_+_238601052 EU832771 EU832772 GQ129315 GQ129316	-231407	+	NM_080678 TSC_hg19_v1_chr2_+_238875655 AK002119 AK293334 AK297502 AK303094	43142	+	TSC_hg19_v1_chr2_+_238875673 AK290063	43198	+	TSC_hg19_v1_chr2_+_238875689 BC010549 AK294107	43221	+	NM_005855|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##AJ001014|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##BC000548|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##DQ891905|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##DQ895091|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##AY265457|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##CR542032|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##CR542044|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##NM_001080504|RBM44|375316|RNA binding motif protein 44##BX648107|RBM44|375316|RNA binding motif protein 44##EU832771|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##EU832772|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129315|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129316|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_080678|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK293334|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK297502|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK303094|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK290063|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##BC010549|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK294107|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)	0.0	
chr14	106877473	106877603	reg1020880.p2	6.857	+	AF460708 AF460709 AF460785 AY003807 AY003817 DQ454548 M33859 M33860 DQ454427 DQ454852 DQ454425 DQ454627 DQ454856 GU552743 DQ454416 DQ454458 GQ232904 GU552731 GU552736 AY003787 AF017463 GU552721 GU552724 GU552725 GU552726 GU552727 GU552728 GU552729 GU552730 AY003850 DQ454418 DQ454671 GQ232774 DQ454432 DQ454433 DQ454901 DQ454979 DQ454980 GQ232865 HM995239 JF810276 AY003855 DQ454422 DQ454434 DQ454622 DQ454870 DQ523887 HM116153 HM116169 HM116182 Z30552 Z30557 Z30561 Z30562 Z30573 Z30576 Z30578 Z30580 Z30581 Z30591 Z30599 Z30674 Z30675 Z30677 DQ454531 DQ454860 DQ454903 EU099089 AF004937 AY003796 AY003804 DQ454392 DQ454610 DQ454833 EU620002 FJ840008 FJ840011 FJ840012 FJ840020 FJ840055 FJ874002 FJ874054 FJ874065 FJ874072 FJ874075 FJ874095 HM116113 HM116114 HM116155 HM116159 HM116160 HM116168 HM116177 HM116195 HM116199 HM116226 AF017459 AF017460 EU619988 AJ487490 AY003825 AJ253061 EU350428 DQ454982 X75022 EF091922 EF175396 EF175402 EF407849 EF441754 GU358660 JF810277 GQ232847 GQ232867 GQ232891 GQ232893 GQ232895 GQ232896 GQ232900 GQ232901 GQ232902 DQ454645 EU099068 EU099071 AF103299 EU090244 EU099076 EU099098 HQ392881 HQ392885 HQ392917 AJ253080 EU099079 EU099096 EU099156 EU099191 EU099252 AJ253066 AM183974 AM183975 AM183976 AM183977 AM183978 AM183995 AF484411 AF103180 AJ253083 AF103278 EF624236 AJ240558 AJ253067 S79918 AJ253059 AJ253072 AJ253074 AJ253079 AJ253081 AJ253082 AJ253084 AJ253087 AJ253088 AJ253089 AJ253090 AJ253091 AJ253092 AJ253093 AJ253094 AJ253095 AJ253098 AJ253102 AJ253103 AJ253104 AJ253108 AJ253109 AJ253110 AJ253112 AJ240555 AJ240556 AJ240557 AJ240560 AJ240561 AJ240566 AJ240574 AJ240575 AJ240576 AJ240577 AJ240580 AJ240581 AJ240590 AJ240595 AJ240604 AJ253044 AJ253050 AJ253054 AJ253077 AJ253085 AY671386 HM996508 Y17927 Y17928 Y17930 Y17931 Y17932 Y17933 Y17934 Y17943 Y17944 Y17945 Y17947 Y17948 Y17949 AY998719 DQ100788 DQ100796 JN110760 JN110800 JN110847 FJ385331 FJ385337 FJ385351 FJ385378 HM774705 HM774878 AF103173 AY193818 EU146315 EU146358 EU146377 EU146394 U21257 U21267 U21268 HM774736 AJ222555 HM995235 X87438 AJ222547 AJ222548 AJ222549 AJ222550 AJ222552 AJ222556 AJ222557 AJ222558 AJ222559 AJ222560 AJ222561 AJ222562 AJ222563 AJ222564 AJ222565 AJ222566 AJ222567 AJ222568 AJ222569 AJ222570 AJ222571 AJ222573 AJ222574 AJ222575 AJ222576 AJ222577 AJ222578 Z46300 Z46301 Z46302 Z46315 Z46316 Z46317 Z46318 Z46319 Z46320 Z46321 Z46322 Z46323 Z46324 Z46325 Z46326 Z46327 Z46328 Z46329 Z46330 Z46331 Z46332 Z46333 Z46334 Z46335 Z46336 Z46337 Z46338 Z46339 Z49139 AJ244942 AJ579251 X64156 X64159 AB063716 AJ244940 AJ279524 AJ279537 AJ556751 AJ579178 AY268371 DQ523935 DQ523975 DQ523980 DQ523984 DQ523987 DQ523990 DQ524003 DQ524006 DQ524007 DQ524018 DQ524044 DQ524065 DQ524068 DQ524074 DQ524077 AB067135 AB067136 AJ244997 AM233792 AM233793 AM233795 AM233801 DQ926349 DQ926350 L34163 X64235 AJ300804 AY670741 AY670790 AY670791 AY670810 AY670816 HM994959 HM995182 HM995183 HM995184 HM995185 HM995187 HM995189 HM995203 HM995204 HM995205 HM995206 HM995207 HM995211 HM995216 HM995244 HM995246 HM995249 HM995308 HM995310 HM995472 HM995477 HM995479 HM995481 HM995550 HM995553 HM995554 HM995743 HM995982 HM996230 HM996238 HM996535 AB063661 AB063671 AB063674 AB066914 AB066915 AB066916 AB066917 AB066918 AB066919 AB066920 AB066921 AB066923 AB066924 AB067034 AB067035 AB067036 AB067037 AB067038 AB067039 AB067040 AB067041 AB067044 AB067046 AB067049 AB067052 AB067053 AB067054 AB067055 AB067056 AB067057 AB067058 AB067059 AB067060 AB067064 AB067066 AB067067 AB067068 AB067084 AB067085 AB067088 AB067089 AB067090 AB067091 AB067092 AB067093 AB067132 AB067133 AB067134 AB067137 AB067142 AB067143 AB067144 AB067145 AB067146 AB067148 AB067149 AB067151 AB110646 AB363152 AB363153 AB363154 AF021948 AF021957 AF021990 AF021991 AF021997 AF022004 AF022005 AF052527 AF062104 AF062113 AF062231 AF062234 AF107233 AF107239 AF107241 AF174041 AF174049 AF174054 AF174085 AF174086 AF174088 AF245309 AF262072 AF262097 AF262100 AF262125 AF262174 AF372845 AJ239335 AJ239362 AJ239377 AJ244929 AJ244931 AJ244935 AJ244937 AJ244938 AJ244939 AJ244941 AJ244943 AJ244944 AJ244951 AJ244959 AJ244960 AJ244962 AJ244966 AJ244967 AJ244968 AJ244969 AJ244972 AJ244973 AJ244975 AJ244978 AJ244982 AJ244984 AJ244985 AJ244987 AJ244988 AJ244990 AJ244991 AJ244992 AJ244994 AJ245008 AJ245009 AJ245011 AJ245013 AJ245017 AJ245028 AJ245035 AJ245036 AJ245039 AJ245040 AJ245041 AJ245042 AJ245043 AJ245044 AJ245046 AJ245049 AJ245051 AJ245052 AJ245054 AJ245057 AJ245065 AJ245236 AJ245238 AJ249631 AJ279513 AJ279519 AJ279521 AJ279526 AJ279531 AJ279535 AJ556773 AJ574778 AJ579118 AJ579121 AJ579122 AJ579124 AJ579129 AJ579135 AJ579164 AJ579165 AJ579167 AJ579175 AJ579176 AJ579201 AJ579206 AJ579208 AJ579211 AJ579213 AJ579240 AJ579241 AJ579242 AJ579243 AJ579246 AJ579248 AJ579249 AJ579250 AJ579253 AJ579255 AJ579256 AJ579257 AJ579258 AJ579259 AJ579260 AJ579286 AJ579287 AJ579289 AJ579290 AJ579302 AJ579304 AY033257 AY062304 AY553641 AY553646 AY670708 AY670709 AY670710 AY670711 AY670716 AY670717 AY670718 AY670720 AY670721 AY670722 AY670723 AY670724 AY670730 AY670736 AY670738 AY670739 AY670743 AY670749 AY670750 AY670755 AY670757 AY670760 AY670761 AY670763 AY670766 AY670767 AY670768 AY670772 AY670775 AY670777 AY670779 AY670781 AY670782 AY670785 AY670787 AY670789 AY670794 AY670795 AY670796 AY670798 AY670801 AY670803 AY670804 AY670811 AY670813 AY670814 AY670815 AY670824 AY670826 AY670827 AY670828 AY670833 AY670834 AY670835 AY670838 AY670839 AY670840 AY670841 AY670842 AY670843 AY670845 AY670846 AY670851 AY670853 AY670855 AY670856 AY670860 AY670863 AY670864 AY670867 AY670870 AY670871 AY670873 AY670875 AY670878 AY670879 AY670882 AY670883 AY670884 AY670885 AY670890 AY670892 AY670893 AY670898 AY670899 AY670900 AY670903 AY670904 AY670905 AY670907 AY670911 AY670913 AY670916 AY670918 AY670919 AY670924 AY670928 AY670929 AY670931 AY670932 AY670935 AY670940 AY670943 AY670944 AY670946 AY670949 AY670952 AY670953 AY670954 AY670962 AY670965 AY670973 AY670974 AY670975 AY670976 AY670977 AY670981 AY670990 AY671010 AY671015 AY671024 AY671047 AY671065 AY671073 AY671078 AY671079 AY671087 AY671093 AY671094 AY671095 AY671096 AY671097 AY671099 AY671100 AY671103 AY671104 AY671105 AY671106 AY671107 AY671108 AY671110 AY671113 AY671115 AY671117 AY671118 AY671120 AY671121 AY671122 AY671123 AY671125 AY671128 AY671129 AY671132 AY671134 AY671135 AY671139 AY671145 AY671153 AY671155 AY671161 AY671209 AY671240 AY671245 AY671257 AY671274 AY671277 AY671283 AY671313 AY671314 AY671315 AY671316 AY671317 AY671319 AY671321 AY671322 AY671323 AY671328 AY671330 AY671332 AY671341 AY671345 AY671347 AY671348 AY671349 AY671354 AY671364 AY671366 AY671370 AY671371 AY671380 AY671382 AY671383 AY671393 AY671409 AY671413 AY671416 AY671422 AY671424 AY671425 AY671427 AY671428 AY671429 AY671430 AY671434 AY671435 AY671436 AY671438 AY671441 AY671443 AY671444 AY671445 AY671446 AY671447 AY671449 AY671452 AY671453 AY671454 AY671455 AY671461 AY671462 AY671464 AY671468 AY671471 AY671478 AY671480 AY671481 AY671483 AY671486 AY671487 AY671491 AY671492 AY671503 AY671505 AY671507 AY671508 AY671510 AY671511 AY671515 AY671518 AY671519 AY671525 AY671527 AY671528 AY671530 AY671532 AY671535 AY671538 AY671539 AY671540 AY671541 AY671543 AY671544 AY671548 AY671555 AY671556 AY671561 AY671564 AY671565 AY671566 AY671568 AY671573 AY671574 AY671577 AY671579 AY671580 AY671581 AY671585 AY671587 AY671591 AY671593 AY671595 AY671612 AY671614 AY671617 AY671619 AY671620 AY671625 AY671629 AY671630 AY671632 AY671634 AY671637 AY671640 AY671642 AY671644 AY671648 AY671650 AY671651 AY671653 AY671658 AY671659 AY671660 AY671663 AY671668 AY671671 AY671676 AY671682 AY671684 AY671685 AY671688 AY671690 AY671691 AY671694 AY671697 AY671698 AY671699 AY671700 AY671702 AY671704 AY671706 AY671707 AY671708 AY671712 AY671716 AY671718 AY671724 AY671732 AY671733 AY671734 AY671735 AY671737 AY671739 AY671741 AY671746 AY671749 AY671750 AY671751 AY671753 AY671756 AY671763 AY671764 AY671765 AY671766 AY671767 AY671769 AY671771 AY671776 AY671781 AY671784 AY885181 AY941889 AY941914 AY941957 DQ005274 DQ005285 DQ100660 DQ100674 DQ100703 DQ100725 DQ100792 DQ100829 DQ100832 DQ100964 DQ926158 DQ926198 DQ926208 DQ926421 DQ926458 DQ926468 DQ926470 DQ926478 DQ926497 DQ926599 DQ926603 EF544907 EF544958 EF544959 EF544973 FJ208782 FJ492903 FJ492909 FJ492910 GU570373 HM152498 HM152511 HM152516 HQ392880 HQ689741 L12192 L23518 L23934 L25293 M26998 M74468 S64473 S66098 S67110 U00497 U00556 U22391 U71103 U89766 U97246 X56592 X87440 Z35492 Z46269 Z46271 Z46272 Z46273 Z46275 Z46277 Z46279 Z46282 Z46304 Z46305 Z46306 Z46307 Z46308 Z46340 Z46341 Z46342 Z49135 Z49140 Z49141 Z49143 Z70604 Z70605 Z70610 Z70616 Z70617 Z70625 Z70626 Z70627 Z70637 Z70638 Z70639 Z70640 Z70641 Z70642 Z70643 Z70644 Z70650 Z74665 Z74695 AY670806 AY670808 AY957532 AY686937 AY957534 DQ535279 DQ535294 DQ535296 DQ535314 DQ535320 DQ535326 DQ535459 EF178028 EF178136 HM996258 M84508 FJ039792 M84512 X54441 AY671298 AY670999 AY671028 AF283780 AF283781 M74018 M74021 AY670983 AY670985 AY670987 AY670989 AY670992 AY670993 AY670995 AY670997 AY670998 AY671018 AY671025 AY671033 AY671043 AY671307 AY671310 AY671046 AY671049 AY671205 AF283784 AY671151 AY671233 AJ579207 AY670982 AY671003 AY671029 AY671050 AY671156 AY671160 AY671171 AY671177 AY671190 AY671199 AY671201 AY671212 AY671226 AY671232 AY671235 AY671236 AY671250 AY671251 AY671261 AY671262 AY671270 AY671272 AY671278 AY671281 AY671287 AY671308 Z47229 AF062101 AF062146 AF062152 AF062158 AF062173 AF062181 AF062183 AF062187 AF062192 AF062196 AF062217 AF062218 AF062250 AJ579203 AY204755 AY204757 AY204759 AY204761 AY671006 AY671008 AY671061 AY671064 AY671168 AY671175 AY671183 AY671200 AY671207 AY671220 AY671238 AY671258 AY671268 AY671275 AY671289 AY671290 AY671303 AY671305 AY671696 AY671705 AY671713 AY671722 AY671727 AY671728 S59161 X64152 X64153 X65904 Z47228 Z47234 Z47241 Z75362 Z75374 Z75376 Z75379 Z75386 Z75389 Z75392 Z75394 Z75398 CU674902 CU678316 BC002963 BC073767 CU675962 BC017356 BC019235 BC001872 BC006180 BX538126 AK301454 TSC_hg19_v1_chr14_-_106830060 AK126280 AK128649 AK127921 CR933690	-47632	-	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 AF044420 AF044422 AF044425 AF044427 AF044442 AF090355 AF099201 AF174074 AF471431 AJ132850 AJ271549 AJ300787 AJ300793 AJ300798 AJ300803 AJ308463 AJ633622 AJ633623 AY028777 AY033265 AY033266 AY033267 AY530317 AY554176 AY640472 AY640475 AY640477 AY640483 AY640501 AY640511 AY640535 AY640539 AY640541 AY640544 AY640549 AY640550 AY640557 AY640558 AY640561 AY640568 AY640569 AY640573 AY640577 AY685306 AY781859 AY846266 AY846267 AY866744 AY941844 AY941856 AY941857 AY941860 AY941863 AY941865 AY941866 AY941868 AY941892 AY941896 AY941898 AY941901 AY941907 AY941913 AY941935 AY941942 AY941950 AY941953 AY941968 AY941970 AY941982 AY941983 AY941985 AY941986 AY941988 AY941989 AY944708 AY944716 AY971015 AY971027 AY971037 AY971078 AY971081 AY971115 AY971120 AY971130 AY971135 DQ065629 DQ065669 DQ065674 DQ065689 DQ065692 DQ065718 DQ065725 DQ431499 DQ431621 DQ431627 DQ840705 DQ840715 DQ840744 DQ926087 DQ926091 DQ926150 DQ926207 DQ926222 DQ926372 DQ926388 DQ926512 DQ926569 DQ926578 DQ926634 EF177978 EF178004 EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 AY866854 AY882579 AY927661 AY941847 AY941848 AY941861 AY941864 AY941867 AY941869 AY941871 AY941872 AY941874 AY941875 AY941893 AY941894 AY941895 AY941897 AY941904 AY941908 AY941922 AY941932 AY941933 AY941934 AY941944 AY941946 AY941951 AY941954 AY941956 AY941963 AY941964 AY941966 AY941967 AY941969 AY944690 AY971127 D83678 D83681 D83684 D83685 D83694 DQ005284 DQ065696 DQ100659 DQ100685 DQ100775 DQ100819 DQ100846 DQ100857 DQ100907 DQ100930 DQ212508 DQ212509 DQ431475 DQ431476 DQ431501 DQ431573 DQ431575 DQ431576 DQ431580 DQ431582 DQ431606 DQ431607 DQ431622 DQ431628 DQ431633 DQ431634 DQ431637 DQ431642 DQ431643 DQ431646 DQ431653 DQ431658 DQ535263 DQ535266 DQ535268 DQ535293 DQ535308 DQ535373 DQ535382 DQ535397 DQ535424 DQ535426 DQ535429 DQ535437 DQ535439 DQ535440 DQ535461 DQ535466 DQ840703 DQ840706 DQ840712 DQ840713 DQ840745 DQ840782 DQ840813 DQ923052 DQ926032 DQ926064 DQ926133 DQ926340 DQ926374 DQ926384 DQ926552 EF177969 EF177975 EF177991 EF178015 EF178075 EF178091 EF178098 EF178099 EF221755 EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	-86244	-	U32154 AF460767 DQ524080 DQ454738 Y08403 HM774396 AF103161 AJ245070 AY866645 AM233757 AY670731 DQ005273 AB063909 AB363132 AJ556745 AY670715 AY670719 AY670726 AY670727 AY670745 AY670770 AY670773 AY670784 AY670819 AY670831 AY670837 AY670857 AY671081 AY671102 AY671324 AY671379 AY671400 AY671500 AY671586 AY671639 AY671641 AY671703 AY671775 AY671785 AY781815 AY781827 AY866636 DQ065711 DQ926028 DQ926188 DQ926206 FJ492934 AJ430733 EF178114 FJ385294 HM152518 AY392953 L28053 AY671012 AY671034 AY671045 AY671152 AY671174 AY671714 AY671721 L03677 Z75396 Z75404 L23570 BC073765 AK130813 AK301332 AK130585 AK128579 AK128568 AK129620 TSC_hg19_v1_chr14_-_106781004	-96768	-	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 AJ245014 AJ245018 AJ245021 AJ245023 AJ245024 AJ245030 AJ245033 AJ245034 AJ245038 AJ245056 AJ245060 AJ245061 AJ245071 AJ249629 AJ279514 AJ279515 AJ279525 AJ279530 AJ308449 AJ389175 AJ389176 AJ414019 AJ416561 AJ555264 AJ556674 AJ556675 AJ556676 AJ556691 AJ556693 AJ574781 AJ579117 AJ579126 AJ579130 AJ579131 AJ579134 AJ579138 AJ579166 AJ579168 AJ579169 AJ579170 AJ579179 AJ579200 AJ579202 AJ579205 AJ579209 AJ579210 AJ579214 AJ579244 AJ579245 AJ579292 AJ579293 AJ579297 AJ617569 AY165854 AY268372 AY268373 AY300037 AY577300 AY640552 AY670713 AY670734 AY670740 AY670742 AY670747 AY670751 AY670754 AY670758 AY670762 AY670771 AY670774 AY670799 AY670802 AY670805 AY670817 AY670822 AY670823 AY670825 AY670849 AY670850 AY670858 AY670859 AY670865 AY670874 AY670881 AY670894 AY670896 AY670897 AY670902 AY670914 AY670920 AY670922 AY670947 AY670950 AY670955 AY670960 AY670961 AY670970 AY670972 AY670978 AY670980 AY670986 AY670991 AY671017 AY671060 AY671089 AY671090 AY671101 AY671109 AY671112 AY671114 AY671119 AY671124 AY671126 AY671136 AY671137 AY671140 AY671146 AY671264 AY671318 AY671368 AY671369 AY671384 AY671392 AY671418 AY671433 AY671439 AY671482 AY671489 AY671517 AY671524 AY671534 AY671536 AY671545 AY671552 AY671560 AY671562 AY671563 AY671567 AY671572 AY671576 AY671578 AY671582 AY671583 AY671588 AY671598 AY671599 AY671600 AY671602 AY671616 AY671624 AY671626 AY671635 AY671638 AY671661 AY671672 AY671677 AY671681 AY671730 AY671736 AY671744 AY671752 AY671773 AY671774 AY671778 AY671780 AY671786 AY781849 AY885184 AY941931 AY941962 AY941975 AY960198 AY960201 AY971014 AY971044 AY971045 AY971080 AY971086 AY998723 DQ005257 DQ065676 DQ100673 DQ100687 DQ100701 DQ100784 DQ100821 DQ100822 DQ100824 DQ100825 DQ100897 DQ100953 DQ205162 DQ205173 DQ212518 DQ212520 DQ328872 DQ431572 DQ431610 DQ926162 DQ926290 DQ926291 DQ926302 DQ926317 DQ926323 DQ926515 DQ926519 DQ926521 DQ926608 FJ039783 FJ039790 FJ039791 FJ385371 FJ385402 FR820867 FR820868 FR820869 FR820870 FR820871 FR820872 FR820873 FR820875 GU570374 HM152512 HM152521 HQ689769 JN201901 L12190 L43117 U00494 U00566 U00571 U00578 U00581 U64496 U96278 U96280 U96285 U96287 U97243 X84336 X84339 Y08428 Y09249 Y09390 Z18316 Z46285 Z70608 Z70621 Z70622 Z70623 Z70631 Z70632 Z70654 Z70655 Z70656 Z70657 DQ926182 DQ926347 DQ926348 AY944695 DQ535289 DQ535393 DQ535427 DQ535433 DQ535456 EF177973 EF178111 EF178132 FJ385279 AJ579303 X54447 AY392937 X17678 S63731 X54437 Z14197 AY671021 AY670994 AY671000 AY671001 AY671009 AY671012 AY671016 AY671023 AY671031 AY671036 AY671054 AY671142 AY671197 AY671335 AY671182 AF013622 AY671048 AY671052 AY671159 AY671179 AY671239 AY671263 AY671276 AY671279 AY671282 AF013619 AF062204 AF062240 AF247737 AY671165 AY671185 AY671217 AY671297 AY671693 AY671723 AY671725 CU677619 EU937522 L23556 L38425 M99607 U86523 U86524 X65903 X65911 Z14198 Z75364 Z75388 AY671162 X52895 TSC_hg19_v1_chr14_-_106878091 X56158 M97921 AF417843 AK057754 AK057775 AK130529 BC025985 BX640824 AK130609 Z14206 AK126352 AK129514 AK129592 AK129637 AK130589 AK130611 BC016369 BX538077 BX648082 BX648874 Z14195 AK095222 AK303185	369	-	GQ232933 AY003798 FJ840151 FJ873995 EF407840 AM279492 AM279629 HM774186 AY957513 EF633772 AY062305 DQ524058 AF174122 AY944701 DQ065664 DQ065670 DQ065719 DQ065726 DQ926522 EF178118 EF633803 FJ385316 GU570332 HM995173 HM995251 HM995315 HM995321 HM995523 AB021518 AB021527 AF035043 AF471473 AJ579183 DQ535349 DQ535444 GU570331 GU570333 X95661 Z47231 BC092518 TSC_hg19_v1_chr14_-_106926725 BX647160 AK123783 AK097306 AK097329	49021	-	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	60920	+	AF174049|SKAP2|8935|src kinase associated phosphoprotein 2##BC002963|IGHM|3507|immunoglobulin heavy constant mu##BC073767|IGHM|3507|immunoglobulin heavy constant mu##BC017356|IGHM|3507|immunoglobulin heavy constant mu##BC019235|IGHM|3507|immunoglobulin heavy constant mu##BC001872|IGHM|3507|immunoglobulin heavy constant mu##BC006180|IGHM|3507|immunoglobulin heavy constant mu##BX538126|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK126280|IGHD|3495|immunoglobulin heavy constant delta##AK128649|IGHD|3495|immunoglobulin heavy constant delta##AK127921|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073765|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK130813|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130585|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128568|IGHD|3495|immunoglobulin heavy constant delta##AK129620|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221	0.932643	CTCF.p2:-10:0.933
chr5	136022090	136022208	reg1022899.p1	6.857	+	NM_001167576 NM_001167577 NM_020389	-320986	-	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-553565	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-553620	+	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	812092	-	TSC_hg19_v1_chr5_-_136834420 AK094489	812278	-	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	812831	-	NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.948556	CTCF.p2:8:0.949
chrX	65948925	65949067	reg1020569.p2	6.857	+	AK314881 NM_001199687	-89873	-	BC034919 AK296264 AK299018 NM_021783	-90110	-	AX775690 AX775692 AF298812 AX775694 AY152724 CU689984 AB528008 AY358735 AY358736 NM_001242310	-113138	-	TSC_hg19_v1_chrX_+_66763874 NM_000044	814879	+	TSC_hg19_v1_chrX_+_66766350 M20260	817375	+	NM_001011645	839686	+	AK314881|EDA2R|60401|ectodysplasin A2 receptor##NM_001199687|EDA2R|60401|ectodysplasin A2 receptor##BC034919|EDA2R|60401|ectodysplasin A2 receptor##AK296264|EDA2R|60401|ectodysplasin A2 receptor##AK299018|EDA2R|60401|ectodysplasin A2 receptor##NM_021783|EDA2R|60401|ectodysplasin A2 receptor##AF298812|EDA2R|60401|ectodysplasin A2 receptor##AY152724|EDA2R|60401|ectodysplasin A2 receptor##AY358735|EDA2R|60401|ectodysplasin A2 receptor##AY358736|EDA2R|60401|ectodysplasin A2 receptor##NM_001242310|EDA2R|60401|ectodysplasin A2 receptor##NM_000044|AR|367|androgen receptor##M20260|AR|367|androgen receptor##NM_001011645|AR|367|androgen receptor	0.110121	
chr14	96523141	96523242	reg1018800.p1	6.856	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	-17545	+	AK023027 TSC_hg19_v1_chr14_+_96342762	-180446	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-342724	-	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	147886	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	148005	+	AK291970 AK309528 NM_000710 TSC_hg19_v1_chr14_+_96722546 U30271 AJ238044	199363	+	NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##AK023027|LOC100507043|100507043|uncharacterized LOC100507043##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2##AK291970|BDKRB1|623|bradykinin receptor B1##AK309528|BDKRB1|623|bradykinin receptor B1##NM_000710|BDKRB1|623|bradykinin receptor B1##U30271|BDKRB1|623|bradykinin receptor B1##AJ238044|BDKRB1|623|bradykinin receptor B1	0.87292	CTCF.p2:-14:0.873
chr4	55837664	55837788	reg1019403.p1	6.856	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	-313592	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-742262	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-742446	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	154028	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	374690	+	TSC_hg19_v1_chr4_+_56212475 CU677982 CR457312	374758	+	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3##CR457312|SRD5A3|79644|steroid 5 alpha-reductase 3	0.015231	
chr11	32906475	32906569	reg1019051.p1	6.855	+	TSC_hg19_v1_chr11_+_32851476 BC010052 NM_024081 BC063393 AF326351	-54972	+	BC146800 AK131470 NM_001008391 BC062749	-90345	-	TSC_hg19_v1_chr11_+_32605376 AK131064 AK292139 AK304378 AK001768 AK300002 AF064603 BC051292 BC011937 BC019103 NM_006360 AK222564 AK307121 CU676384 AY769947 CR450300 DQ185042	-301124	+	TSC_hg19_v1_chr11_+_32914677 BC112935 NM_001076786	8053	+	TSC_hg19_v1_chr11_+_33037423 BC030970 NM_001077242 AK294934 BC011446 AJ245600 AK295960 EU446553 CU689058	130926	+	AF447588 NM_139160	131205	+	BC010052|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##NM_024081|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC063393|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##AF326351|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC146800|CCDC73|493860|coiled-coil domain containing 73##AK131470|CCDC73|493860|coiled-coil domain containing 73##NM_001008391|CCDC73|493860|coiled-coil domain containing 73##BC062749|CCDC73|493860|coiled-coil domain containing 73##AK131064|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK292139|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK304378|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK001768|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK300002|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AF064603|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC051292|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC011937|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC019103|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##NM_006360|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK222564|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK307121|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AY769947|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##CR450300|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##DQ185042|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC112935|QSER1|79832|glutamine and serine rich 1##NM_001076786|QSER1|79832|glutamine and serine rich 1##BC030970|DEPDC7|91614|DEP domain containing 7##NM_001077242|DEPDC7|91614|DEP domain containing 7##AK294934|DEPDC7|91614|DEP domain containing 7##BC011446|DEPDC7|91614|DEP domain containing 7##AJ245600|DEPDC7|91614|DEP domain containing 7##AK295960|DEPDC7|91614|DEP domain containing 7##EU446553|DEPDC7|91614|DEP domain containing 7##AF447588|DEPDC7|91614|DEP domain containing 7##NM_139160|DEPDC7|91614|DEP domain containing 7	0.05783	
chr11	93381453	93381582	reg1021262.p1	6.855	+	AF197137 TSC_hg19_v1_chr11_-_93276558 BC031564 NM_020179	-104982	-	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	-317674	+	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	-450432	-	TSC_hg19_v1_chr11_+_93394847 NM_033395 BC015989 BC017394	13317	+	AB051518 TSC_hg19_v1_chr11_+_93394877	13372	+	AF275800 TSC_hg19_v1_chr11_-_93474661 BC001972 AF086435 AK027016 NM_024116	93089	-	AF197137|C11orf75|56935|chromosome 11 open reading frame 75##BC031564|C11orf75|56935|chromosome 11 open reading frame 75##NM_020179|C11orf75|56935|chromosome 11 open reading frame 75##NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_033395|KIAA1731|85459|KIAA1731##BC015989|KIAA1731|85459|KIAA1731##BC017394|KIAA1731|85459|KIAA1731##AB051518|KIAA1731|85459|KIAA1731##AF275800|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##BC001972|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AF086435|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AK027016|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##NM_024116|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa	0.186231	
chr14	50320656	50320787	reg1021044.p2	6.855	+	TSC_hg19_v1_chr14_-_50319530 AK295010 AK293236 BC006001 BC056687 NM_004713	-1188	-	TSC_hg19_v1_chr14_-_50319497 AK304695 AK308537	-1225	-	TSC_hg19_v1_chr14_-_50319495 AK000913	-1238	-	TSC_hg19_v1_chr14_-_50329567 X02067	8875	-	TSC_hg19_v1_chr14_+_50359731 NM_001663	39009	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	39097	+	AK295010|NEMF|9147|nuclear export mediator factor##AK293236|NEMF|9147|nuclear export mediator factor##BC006001|NEMF|9147|nuclear export mediator factor##BC056687|NEMF|9147|nuclear export mediator factor##NM_004713|NEMF|9147|nuclear export mediator factor##AK304695|NEMF|9147|nuclear export mediator factor##AK308537|NEMF|9147|nuclear export mediator factor##AK000913|NEMF|9147|nuclear export mediator factor##X02067|RN7SL2|378706|RNA, 7SL, cytoplasmic 2##NM_001663|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6	0.210967	CTCF.p2:-14:0.211
chr22	43506510	43506601	reg1019440.p2	6.855	+	TSC_hg19_v1_chr22_-_43485410 AF104927 AF173935 AK315658 BC009058 AK095996 BC014968 AL136687 NM_012263	-21168	-	TSC_hg19_v1_chr22_-_43411156 NM_001184970	-95378	-	TSC_hg19_v1_chr22_-_43411136 AF128536	-95416	-	NM_001197 TSC_hg19_v1_chr22_+_43506755 BC001599 U49730 U34584	217	+	TSC_hg19_v1_chr22_-_43539355 BC030985 AL359401 AL359403 AK314059	32797	-	TSC_hg19_v1_chr22_-_43539392 BC042195	32837	-	AF104927|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AF173935|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK315658|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC009058|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK095996|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC014968|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AL136687|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_012263|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_001184970|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001197|BIK|638|BCL2-interacting killer (apoptosis-inducing)##BC001599|BIK|638|BCL2-interacting killer (apoptosis-inducing)##U49730|BIK|638|BCL2-interacting killer (apoptosis-inducing)##U34584|BIK|638|BCL2-interacting killer (apoptosis-inducing)##BC030985|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AL359401|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AL359403|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##AK314059|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)##BC042195|MCAT|27349|malonyl CoA:ACP acyltransferase (mitochondrial)	0.919871	CTCF.p2:7:0.920
chr11	33857141	33857267	reg1021139.p2	6.854	+	AB209039 AF176702 TSC_hg19_v1_chr11_-_33796067 AF174595 CU692298 EU832324 EU832409 AL136625 BC046110 AK001943 AK128454 AK304866 BC039291 NM_012175 NM_033406	-61212	-	TSC_hg19_v1_chr11_-_33757970 M27909 AK311778 X16447 X17198 NM_000611 NM_203329 NM_203330 NM_203331	-99256	-	NM_001127227	-112707	-	AB463835 CU692080 DQ892333 DQ895538 BC073973 TSC_hg19_v1_chr11_-_33891132	33838	-	BC035607 TSC_hg19_v1_chr11_-_33891285	34068	-	BC042426 TSC_hg19_v1_chr11_-_33891402 BC034041 NM_001142316	34187	-	AB209039|FBXO3|26273|F-box protein 3##AF176702|FBXO3|26273|F-box protein 3##AF174595|FBXO3|26273|F-box protein 3##EU832324|FBXO3|26273|F-box protein 3##EU832409|FBXO3|26273|F-box protein 3##AL136625|FBXO3|26273|F-box protein 3##BC046110|FBXO3|26273|F-box protein 3##AK001943|FBXO3|26273|F-box protein 3##AK128454|FBXO3|26273|F-box protein 3##AK304866|FBXO3|26273|F-box protein 3##BC039291|FBXO3|26273|F-box protein 3##NM_012175|FBXO3|26273|F-box protein 3##NM_033406|FBXO3|26273|F-box protein 3##M27909|CD59|966|CD59 molecule, complement regulatory protein##AK311778|CD59|966|CD59 molecule, complement regulatory protein##X16447|CD59|966|CD59 molecule, complement regulatory protein##X17198|CD59|966|CD59 molecule, complement regulatory protein##NM_000611|CD59|966|CD59 molecule, complement regulatory protein##NM_203329|CD59|966|CD59 molecule, complement regulatory protein##NM_203330|CD59|966|CD59 molecule, complement regulatory protein##NM_203331|CD59|966|CD59 molecule, complement regulatory protein##NM_001127227|CD59|966|CD59 molecule, complement regulatory protein##DQ892333|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##DQ895538|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC073973|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC035607|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC042426|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC034041|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142316|LMO2|4005|LIM domain only 2 (rhombotin-like 1)	0.987521	CTCF.p2:-21:0.988
chr1	176866609	176866763	reg1017182.p1	6.854	+	AF342989 AF342990 BC062665 BC104644 NM_020318 NM_021936 BC152552	-434374	+	AF527539 TSC_hg19_v1_chr1_-_176176377	-690310	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	-690317	-	BC142697 AB006627 BC146795 TSC_hg19_v1_chr1_-_177133827	267139	-	AK307820 AK295126 BC032870 BC049377 TSC_hg19_v1_chr1_-_177134004 NM_004319 NM_207108	267300	-	TSC_hg19_v1_chr1_-_177134042 AK309094	267389	-	AF342989|PAPPA2|60676|pappalysin 2##AF342990|PAPPA2|60676|pappalysin 2##BC062665|PAPPA2|60676|pappalysin 2##BC104644|PAPPA2|60676|pappalysin 2##NM_020318|PAPPA2|60676|pappalysin 2##NM_021936|PAPPA2|60676|pappalysin 2##BC152552|PAPPA2|60676|pappalysin 2##AF527539|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2##BC142697|ASTN1|460|astrotactin 1##AB006627|ASTN1|460|astrotactin 1##BC146795|ASTN1|460|astrotactin 1##AK307820|ASTN1|460|astrotactin 1##AK295126|ASTN1|460|astrotactin 1##BC032870|ASTN1|460|astrotactin 1##BC049377|ASTN1|460|astrotactin 1##NM_004319|ASTN1|460|astrotactin 1##NM_207108|ASTN1|460|astrotactin 1##AK309094|ASTN1|460|astrotactin 1	0.813737	CTCF.p2:-20:0.814
chr1	91483687	91483836	reg1021973.p1	6.854	+	BC126439 BC126441 AY338397 NM_020063	-300976	-	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	-1023045	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-1196197	+	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	3277	-	TSC_hg19_v1_chr1_-_91487583 BC041138 AK291520	3802	-	TSC_hg19_v1_chr1_-_91487586 BC092462	3828	-	BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644##BC041138|ZNF644|84146|zinc finger protein 644##AK291520|ZNF644|84146|zinc finger protein 644##BC092462|ZNF644|84146|zinc finger protein 644	0.098455	
chr7	93180496	93180617	reg1020914.p1	6.854	+	BC017888 NM_017667 NM_024553 TSC_hg19_v1_chr7_+_92861678 AK126478 AL833112 AK055965 AK299582 AB100163 BC108708 BC132740 BC132742 AB058764 BC152424 CU676100 AB385511	-318830	+	TSC_hg19_v1_chr7_-_92855783 AK096002 AK298361 NM_001039372	-324773	-	BC136300 BC136301 BC046365 AY358345 NM_198151 BC139906	-331691	-	AB022178 NM_001164738	8565	-	AB022177 AK313996 NM_001164737 NM_001742	23482	-	CU675117 DQ892533 DQ895744 L27624 AY691946 D29992 AK075427 AK024817 AK075425 AK092499 AK129833 AK313260 BC005330 NM_006528 TSC_hg19_v1_chr7_-_93520066	339473	-	BC017888|CCDC132|55610|coiled-coil domain containing 132##NM_017667|CCDC132|55610|coiled-coil domain containing 132##NM_024553|CCDC132|55610|coiled-coil domain containing 132##AK126478|CCDC132|55610|coiled-coil domain containing 132##AL833112|CCDC132|55610|coiled-coil domain containing 132##AK055965|CCDC132|55610|coiled-coil domain containing 132##AK299582|CCDC132|55610|coiled-coil domain containing 132##AB100163|CCDC132|55610|coiled-coil domain containing 132##BC108708|CCDC132|55610|coiled-coil domain containing 132##BC132740|CCDC132|55610|coiled-coil domain containing 132##BC132742|CCDC132|55610|coiled-coil domain containing 132##AB058764|CCDC132|55610|coiled-coil domain containing 132##BC152424|CCDC132|55610|coiled-coil domain containing 132##AK096002|HEPACAM2|253012|HEPACAM family member 2##AK298361|HEPACAM2|253012|HEPACAM family member 2##NM_001039372|HEPACAM2|253012|HEPACAM family member 2##BC136300|HEPACAM2|253012|HEPACAM family member 2##BC136301|HEPACAM2|253012|HEPACAM family member 2##BC046365|HEPACAM2|253012|HEPACAM family member 2##AY358345|HEPACAM2|253012|HEPACAM family member 2##NM_198151|HEPACAM2|253012|HEPACAM family member 2##BC139906|HEPACAM2|253012|HEPACAM family member 2##AB022178|CALCR|799|calcitonin receptor##NM_001164738|CALCR|799|calcitonin receptor##AB022177|CALCR|799|calcitonin receptor##AK313996|CALCR|799|calcitonin receptor##NM_001164737|CALCR|799|calcitonin receptor##NM_001742|CALCR|799|calcitonin receptor##DQ892533|TFPI2|7980|tissue factor pathway inhibitor 2##DQ895744|TFPI2|7980|tissue factor pathway inhibitor 2##L27624|TFPI2|7980|tissue factor pathway inhibitor 2##AY691946|TFPI2|7980|tissue factor pathway inhibitor 2##D29992|TFPI2|7980|tissue factor pathway inhibitor 2##AK075427|TFPI2|7980|tissue factor pathway inhibitor 2##AK024817|TFPI2|7980|tissue factor pathway inhibitor 2##AK075425|TFPI2|7980|tissue factor pathway inhibitor 2##AK092499|TFPI2|7980|tissue factor pathway inhibitor 2##AK129833|TFPI2|7980|tissue factor pathway inhibitor 2##AK313260|TFPI2|7980|tissue factor pathway inhibitor 2##BC005330|TFPI2|7980|tissue factor pathway inhibitor 2##NM_006528|TFPI2|7980|tissue factor pathway inhibitor 2	0.293156	CTCF.p2:9:0.293
chr8	144896720	144896799	reg1020726.p1	6.854	+	TSC_hg19_v1_chr8_+_144824624 AK091211 AX746851	-72127	+	TSC_hg19_v1_chr8_+_144816308 AK124079	-80457	+	TSC_hg19_v1_chr8_-_144815943 NM_198488 HM481257	-80818	-	AF240677 D63481 AB383767 AY062238 NM_015356 NM_182706	785	-	TSC_hg19_v1_chr8_-_144911203 BC011265 NM_001136033 BC009734	14448	-	U51586 AF190744 CR457143 CU679161 TSC_hg19_v1_chr8_-_144911483 AF217197	14714	-	AK091211|LOC100128338|100128338|uncharacterized LOC100128338##AK124079|LOC100128338|100128338|uncharacterized LOC100128338##NM_198488|FAM83H|286077|family with sequence similarity 83, member H##AF240677|SCRIB|23513|scribbled homolog (Drosophila)##D63481|SCRIB|23513|scribbled homolog (Drosophila)##AY062238|SCRIB|23513|scribbled homolog (Drosophila)##NM_015356|SCRIB|23513|scribbled homolog (Drosophila)##NM_182706|SCRIB|23513|scribbled homolog (Drosophila)##BC011265|PUF60|22827|poly-U binding splicing factor 60KDa##NM_001136033|PUF60|22827|poly-U binding splicing factor 60KDa##BC009734|PUF60|22827|poly-U binding splicing factor 60KDa##U51586|PUF60|22827|poly-U binding splicing factor 60KDa##AF190744|PUF60|22827|poly-U binding splicing factor 60KDa##CR457143|PUF60|22827|poly-U binding splicing factor 60KDa##AF217197|PUF60|22827|poly-U binding splicing factor 60KDa	0.168768	
chr13	36969548	36969674	reg1018622.p1	6.853	+	AK057764 NM_001142294	-25309	-	TSC_hg19_v1_chr13_-_36920854 BX648004 NM_001142295	-48753	-	TSC_hg19_v1_chr13_-_36920622 BC026284 NM_001142296 NM_015087	-48987	-	NM_001111046 NM_001111047 TSC_hg19_v1_chr13_+_37006047 AK301897	36408	+	AK314261 NM_001111045 NM_003914	36797	+	TSC_hg19_v1_chr13_+_37006631 AK225146 U66838 BC035479 BC036346 AB462995 AM393372 BT019577 DQ891303 DQ894488	37082	+	AK057764|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_001142294|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##BX648004|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_001142295|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##BC026284|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_001142296|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_015087|SPG20|23111|spastic paraplegia 20 (Troyer syndrome)##NM_001111046|CCNA1|8900|cyclin A1##NM_001111047|CCNA1|8900|cyclin A1##AK301897|CCNA1|8900|cyclin A1##AK314261|CCNA1|8900|cyclin A1##NM_001111045|CCNA1|8900|cyclin A1##NM_003914|CCNA1|8900|cyclin A1##AK225146|CCNA1|8900|cyclin A1##U66838|CCNA1|8900|cyclin A1##BC035479|CCNA1|8900|cyclin A1##BC036346|CCNA1|8900|cyclin A1##AM393372|CCNA1|8900|cyclin A1##BT019577|CCNA1|8900|cyclin A1##DQ891303|CCNA1|8900|cyclin A1##DQ894488|CCNA1|8900|cyclin A1	0.966094	CTCF.p2:9:0.966
chr7	105297516	105297620	reg1018555.p1	6.853	+	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	-75633	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	-124922	+	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	-134907	-	AK300338 NM_138495	22040	-	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	219417	-	TSC_hg19_v1_chr7_+_105517250 AK125261	219696	+	BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##AK125261|CDHR3|222256|cadherin-related family member 3	0.999314	CTCF.p2:-2:0.999
chr1	48397221	48397353	reg1020250.p2	6.852	+	AF042832 NM_004474	-495599	+	AF275722 NM_012186	-515544	+	TSC_hg19_v1_chr1_+_47799646 AF259961	-597646	+	NM_001194986	65274	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	291105	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	540391	-	AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##NM_001194986|LOC388630|388630|UPF0632 protein A##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6	0.0	
chr5	176386213	176386341	reg1019893.p2	6.852	+	U51333 BC028129 NM_002115	-59954	-	TSC_hg19_v1_chr5_+_176237521 AK131380 NM_133369 BC157824	-148722	+	TSC_hg19_v1_chr5_+_176074497 AK024427 BC067105 BC010405 AF174603 CU679699 CU688248	-311725	+	AK304794 BX537376 NM_016290 AK023044 BC032561 BC006078 BC014069 AF349313 NM_001199297 NM_001199298 TSC_hg19_v1_chr5_-_176433806	47311	-	AK297448 AK297584 NM_012279 TSC_hg19_v1_chr5_+_176449708 AK295549 AF083340 AK026627 AK300065 BC007775 AL359576 CR749692 AK131469 AK300738 AB463365 AM392799 AM393768	63442	+	TSC_hg19_v1_chr5_+_176513910 BC011847 AK301169 AK225280 AK225909 NM_002011 NM_213647 L03840	127605	+	U51333|HK3|3101|hexokinase 3 (white cell)##BC028129|HK3|3101|hexokinase 3 (white cell)##NM_002115|HK3|3101|hexokinase 3 (white cell)##AK131380|UNC5A|90249|unc-5 homolog A (C. elegans)##NM_133369|UNC5A|90249|unc-5 homolog A (C. elegans)##BC157824|UNC5A|90249|unc-5 homolog A (C. elegans)##AK024427|TSPAN17|26262|tetraspanin 17##BC067105|TSPAN17|26262|tetraspanin 17##BC010405|TSPAN17|26262|tetraspanin 17##AF174603|TSPAN17|26262|tetraspanin 17##AK304794|UIMC1|51720|ubiquitin interaction motif containing 1##BX537376|UIMC1|51720|ubiquitin interaction motif containing 1##NM_016290|UIMC1|51720|ubiquitin interaction motif containing 1##AK023044|UIMC1|51720|ubiquitin interaction motif containing 1##BC032561|UIMC1|51720|ubiquitin interaction motif containing 1##BC006078|UIMC1|51720|ubiquitin interaction motif containing 1##AF349313|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199297|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199298|UIMC1|51720|ubiquitin interaction motif containing 1##AK297448|ZNF346|23567|zinc finger protein 346##NM_012279|ZNF346|23567|zinc finger protein 346##AK295549|ZNF346|23567|zinc finger protein 346##AF083340|ZNF346|23567|zinc finger protein 346##AK026627|ZNF346|23567|zinc finger protein 346##AK300065|ZNF346|23567|zinc finger protein 346##BC007775|ZNF346|23567|zinc finger protein 346##AL359576|ZNF346|23567|zinc finger protein 346##CR749692|ZNF346|23567|zinc finger protein 346##AK131469|ZNF346|23567|zinc finger protein 346##AK300738|ZNF346|23567|zinc finger protein 346##AM392799|ZNF346|23567|zinc finger protein 346##AM393768|ZNF346|23567|zinc finger protein 346##BC011847|FGFR4|2264|fibroblast growth factor receptor 4##AK301169|FGFR4|2264|fibroblast growth factor receptor 4##AK225280|FGFR4|2264|fibroblast growth factor receptor 4##AK225909|FGFR4|2264|fibroblast growth factor receptor 4##NM_002011|FGFR4|2264|fibroblast growth factor receptor 4##NM_213647|FGFR4|2264|fibroblast growth factor receptor 4##L03840|FGFR4|2264|fibroblast growth factor receptor 4	0.926104	CTCF.p2:8:0.926
chrX	41657442	41657587	reg1020215.p1	6.852	+	BC070180 NM_080817 AK122626 AK313702 AL832460	-74094	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	-109247	+	AJ278865 AF254868 NM_022567	-350815	+	AB208859 AB590064 HQ258518 AY705392 AF035582 BC117311 BC143454 BC143456 AF032119 NM_001126054 NM_001126055 NM_003688 AK313399	124811	-	BC044787 TSC_hg19_v1_chrX_+_43514289	1856709	+	TSC_hg19_v1_chrX_+_43515423 NM_000240 AK223499	1857900	+	BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##AJ278865|NYX|60506|nyctalopin##AF254868|NYX|60506|nyctalopin##NM_022567|NYX|60506|nyctalopin##AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC044787|MAOA|4128|monoamine oxidase A##NM_000240|MAOA|4128|monoamine oxidase A##AK223499|MAOA|4128|monoamine oxidase A	0.991867	CTCF.p2:-13:0.992
chr1	27895178	27895359	reg1019673.p2	6.851	+	TSC_hg19_v1_chr1_-_27816676 NM_001201404 NM_006990	-78592	-	TSC_hg19_v1_chr1_-_27816670 BC012329	-78597	-	TSC_hg19_v1_chr1_-_27816621 AK303011 BC032724 BC050093 BC040943	-78668	-	BC042058 NM_001029882	34853	-	BC064935 TSC_hg19_v1_chr1_-_27930394	35109	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	57402	-	NM_001201404|WASF2|10163|WAS protein family, member 2##NM_006990|WASF2|10163|WAS protein family, member 2##BC012329|WASF2|10163|WAS protein family, member 2##AK303011|WASF2|10163|WAS protein family, member 2##BC032724|WASF2|10163|WAS protein family, member 2##BC040943|WASF2|10163|WAS protein family, member 2##NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1##BC064935|AHDC1|27245|AT hook, DNA binding motif, containing 1##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	0.785821	CTCF.p2:-35:0.786
chr15	98985743	98985858	reg1019900.p1	6.851	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	-481849	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	-481881	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	-1659128	+	AK097062 AK097062 NM_182562	71810	-	TSC_hg19_v1_chr15_+_99191767 AB425196	206171	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	206956	+	BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor	0.499992	CTCF.p2:-1:0.500
chr17	55532475	55532656	reg1016069.p1	6.850	+	AK093888 AX748353 NM_170721	-198192	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-198592	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-369422	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	394839	-	AK000746 NM_017949	448184	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	500111	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.0	
chr20	59838274	59838386	reg1021130.p1	6.850	+	TSC_hg19_v1_chr20_+_59827453 BC101651 BC112150 NM_001794 AK315192 L34059	-10825	+	TSC_hg19_v1_chr20_+_58713521 AK309218 AK092805 AX747739	-1124796	+	TSC_hg19_v1_chr20_+_58630979 AK091179 AX746831 NM_173644	-1207335	+	AK308345 NM_001252338	236146	+	NM_001252339 AK124724	336494	+	U75308 NM_003185 Y11354 TSC_hg19_v1_chr20_-_60640882	802549	-	BC101651|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC112150|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001794|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK315192|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##L34059|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK092805|LOC284757|284757|uncharacterized LOC284757##AK091179|C20orf197|284756|chromosome 20 open reading frame 197##NM_173644|C20orf197|284756|chromosome 20 open reading frame 197##AK308345|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252338|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252339|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK124724|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##U75308|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##NM_003185|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##Y11354|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa	0.977167	CTCF.p2:11:0.977
chr11	123305073	123305242	reg1020185.p1	6.849	+	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	-239152	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	-239255	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	-372278	-	TSC_hg19_v1_chr11_+_123396366 AK127457	91198	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	91347	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	125816	+	AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AK127457|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B	0.141047	
chr6_dbb_hap3	2139695	2139824	reg1020815.p2	6.849	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.669371	CTCF.p2:2:0.669
chr12	52288874	52288996	reg1020897.p2	6.848	+	AK125517 BC121152 NM_001130015 NM_182608 BC121153 AF517108 AF517109 BX537908 BX640656 BX647684 BX649168	-7040	+	AK129980 NM_001013690	-63235	-	NM_001177984 AF225988 FJ611941	-232361	+	HM161905 TSC_hg19_v1_chr12_+_52300731 HM161906	11776	+	NM_000020 Z22533 TSC_hg19_v1_chr12_+_52301290 AK298493	12314	+	NM_001077401 AK303331 L17075 BC042637 CU692110	17249	+	AK125517|ANKRD33|341405|ankyrin repeat domain 33##BC121152|ANKRD33|341405|ankyrin repeat domain 33##NM_001130015|ANKRD33|341405|ankyrin repeat domain 33##NM_182608|ANKRD33|341405|ankyrin repeat domain 33##BC121153|ANKRD33|341405|ankyrin repeat domain 33##AF517108|ANKRD33|341405|ankyrin repeat domain 33##AF517109|ANKRD33|341405|ankyrin repeat domain 33##BX537908|ANKRD33|341405|ankyrin repeat domain 33##BX640656|ANKRD33|341405|ankyrin repeat domain 33##BX647684|ANKRD33|341405|ankyrin repeat domain 33##BX649168|ANKRD33|341405|ankyrin repeat domain 33##AK129980|FIGNL2|401720|fidgetin-like 2##NM_001013690|FIGNL2|401720|fidgetin-like 2##NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##HM161905|ACVRL1|94|activin A receptor type II-like 1##HM161906|ACVRL1|94|activin A receptor type II-like 1##NM_000020|ACVRL1|94|activin A receptor type II-like 1##Z22533|ACVRL1|94|activin A receptor type II-like 1##AK298493|ACVRL1|94|activin A receptor type II-like 1##NM_001077401|ACVRL1|94|activin A receptor type II-like 1##AK303331|ACVRL1|94|activin A receptor type II-like 1##L17075|ACVRL1|94|activin A receptor type II-like 1##BC042637|ACVRL1|94|activin A receptor type II-like 1	0.897734	CTCF.p2:-11:0.898
chr18	54719543	54719676	reg1019552.p2	6.848	+	TSC_hg19_v1_chr18_+_54424445 BC050352	-295161	+	TSC_hg19_v1_chr18_+_54318593 AK057141 NM_015285 NM_052834 AB011113 BC150282	-401003	+	TSC_hg19_v1_chr18_-_54305956 BC001156 AF003938 NM_004786	-413695	-	AK127964 TSC_hg19_v1_chr18_+_54814333 BC021740 BC035018 AK301799	94730	+	AB208996 NM_015879	300111	+	TSC_hg19_v1_chr18_+_55102810 NM_004852 Y18198 BC108925 BC108926	383256	+	BC050352|WDR7|23335|WD repeat domain 7##AK057141|WDR7|23335|WD repeat domain 7##NM_015285|WDR7|23335|WD repeat domain 7##NM_052834|WDR7|23335|WD repeat domain 7##AB011113|WDR7|23335|WD repeat domain 7##BC150282|WDR7|23335|WD repeat domain 7##BC001156|TXNL1|9352|thioredoxin-like 1##AF003938|TXNL1|9352|thioredoxin-like 1##NM_004786|TXNL1|9352|thioredoxin-like 1##AK127964|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC021740|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC035018|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK301799|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_004852|ONECUT2|9480|one cut homeobox 2##Y18198|ONECUT2|9480|one cut homeobox 2##BC108925|ONECUT2|9480|one cut homeobox 2##BC108926|ONECUT2|9480|one cut homeobox 2	0.740209	CTCF.p2:5:0.740
chr3	168582849	168582989	reg1022920.p1	6.848	+	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	-769488	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	-769804	-	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-1129430	+	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	281160	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	281443	-	BX640908 NM_001164000	282602	-	AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus	0.425825	CTCF.p2:1:0.426
chr5	69882028	69882167	reg1023378.p1	6.848	+	TSC_hg19_v1_chr5_-_69882021 AK097091	-67	-	TSC_hg19_v1_chr5_+_69696959 AK097091	-185178	+	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	-536665	+	NM_021967 NM_022968 BC021174 NM_001178087 NM_022978 AF073519 AF073518 BC035932 BC093880 BC171749 BC101970 BC103687 BC104738 BC143260 BC093882 BC143255	314486	+	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	338753	+	AB048534 NM_004536 NM_022892	438843	-	AK097091|SMA4|11039|glucuronidase, beta pseudogene##AK097091|SMA4|11039|glucuronidase, beta pseudogene##NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric##NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric##AB048534|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_004536|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_022892|NAIP|4671|NLR family, apoptosis inhibitory protein	0.98704	CTCF.p2:-13:0.987
chr11	120205664	120205754	reg1018787.p1	6.847	+	AK096207 AK304086 TSC_hg19_v1_chr11_+_120196007 AK289680 AK294713 BC015232	-9691	+	AK128040 NM_001198670 NM_001198671 NM_001198672 NM_001198673 NM_001198674 NM_001198675 NM_174926	-9872	+	AK291993 NM_014352 AF162278 BC101649 BC143593 BC143594 BC143595 AF133895 AJ012214 EU446698	-94732	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	1395	+	BC063117 NM_001198665 NM_015313	1908	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	176756	+	AK096207|TMEM136|219902|transmembrane protein 136##AK304086|TMEM136|219902|transmembrane protein 136##AK289680|TMEM136|219902|transmembrane protein 136##AK294713|TMEM136|219902|transmembrane protein 136##BC015232|TMEM136|219902|transmembrane protein 136##AK128040|TMEM136|219902|transmembrane protein 136##NM_001198670|TMEM136|219902|transmembrane protein 136##NM_001198671|TMEM136|219902|transmembrane protein 136##NM_001198672|TMEM136|219902|transmembrane protein 136##NM_001198673|TMEM136|219902|transmembrane protein 136##NM_001198674|TMEM136|219902|transmembrane protein 136##NM_001198675|TMEM136|219902|transmembrane protein 136##NM_174926|TMEM136|219902|transmembrane protein 136##AK291993|POU2F3|25833|POU class 2 homeobox 3##NM_014352|POU2F3|25833|POU class 2 homeobox 3##AF162278|POU2F3|25833|POU class 2 homeobox 3##BC101649|POU2F3|25833|POU class 2 homeobox 3##BC143593|POU2F3|25833|POU class 2 homeobox 3##BC143594|POU2F3|25833|POU class 2 homeobox 3##BC143595|POU2F3|25833|POU class 2 homeobox 3##AF133895|POU2F3|25833|POU class 2 homeobox 3##AJ012214|POU2F3|25833|POU class 2 homeobox 3##EU446698|POU2F3|25833|POU class 2 homeobox 3##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4	0.98462	CTCF.p2:-14:0.985
chr14	60155288	60155394	reg1018743.p1	6.847	+	AK290534 NM_206852 TSC_hg19_v1_chr14_-_60097533	-57808	-	TSC_hg19_v1_chr14_-_60097342 BC000314 BC003003 AK297492	-57997	-	CR457030 L10335 TSC_hg19_v1_chr14_-_60097308	-58076	-	AB587373 TSC_hg19_v1_chr14_-_60337495 BC111694 L10333 BC090862 BC068510 NM_021136	182112	-	NM_022495 TSC_hg19_v1_chr14_+_60558640 AK095489	403486	+	AY359031 TSC_hg19_v1_chr14_-_60632031 BC000637	476691	-	AK290534|RTN1|6252|reticulon 1##NM_206852|RTN1|6252|reticulon 1##BC000314|RTN1|6252|reticulon 1##BC003003|RTN1|6252|reticulon 1##AK297492|RTN1|6252|reticulon 1##CR457030|RTN1|6252|reticulon 1##L10335|RTN1|6252|reticulon 1##BC111694|RTN1|6252|reticulon 1##L10333|RTN1|6252|reticulon 1##BC090862|RTN1|6252|reticulon 1##BC068510|RTN1|6252|reticulon 1##NM_021136|RTN1|6252|reticulon 1##NM_022495|C14orf135|64430|chromosome 14 open reading frame 135##AK095489|C14orf135|64430|chromosome 14 open reading frame 135##AY359031|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC000637|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7	0.488378	CTCF.p2:5:0.488
chr2	165849460	165849603	reg1022200.p1	6.847	+	AK293998 AK097141 NM_001199148 NM_173512	-37517	-	AK225849 BC006264 TSC_hg19_v1_chr2_-_165698685 AK294937	-150909	-	TSC_hg19_v1_chr2_-_165698334 AK002054	-151204	-	AF225986 AF225987 AK299757 TSC_hg19_v1_chr2_-_166060561 NM_001081676 NM_001081677 NM_006922 DQ993536	211046	-	AK289656 NM_001040142 DQ993531 BC029489 BC047398 BC048417	246401	+	NM_021007	300809	+	AK293998|SLC38A11|151258|solute carrier family 38, member 11##AK097141|SLC38A11|151258|solute carrier family 38, member 11##NM_001199148|SLC38A11|151258|solute carrier family 38, member 11##NM_173512|SLC38A11|151258|solute carrier family 38, member 11##AK225849|COBLL1|22837|COBL-like 1##BC006264|COBLL1|22837|COBL-like 1##AK294937|COBLL1|22837|COBL-like 1##AK002054|COBLL1|22837|COBL-like 1##AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_021007|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	0.996822	CTCF.p2:2:0.997
chr11	122974038	122974178	reg1020427.p1	6.846	+	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	-41229	-	AB034951 BC016179 BC016660 BC019816 AF352832 TSC_hg19_v1_chr11_-_122932842 AK222628 AK222785 AK096100 AK129885 AK303935	-41284	-	AB231738 NM_001098169	-121752	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	91794	-	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	91897	-	TSC_hg19_v1_chr11_+_123396366 AK127457	422247	+	NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AB034951|HSPA8|3312|heat shock 70kDa protein 8##BC016179|HSPA8|3312|heat shock 70kDa protein 8##BC016660|HSPA8|3312|heat shock 70kDa protein 8##BC019816|HSPA8|3312|heat shock 70kDa protein 8##AF352832|HSPA8|3312|heat shock 70kDa protein 8##AK222628|HSPA8|3312|heat shock 70kDa protein 8##AK222785|HSPA8|3312|heat shock 70kDa protein 8##AK096100|HSPA8|3312|heat shock 70kDa protein 8##AK129885|HSPA8|3312|heat shock 70kDa protein 8##AK303935|HSPA8|3312|heat shock 70kDa protein 8##AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein##AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AK127457|GRAMD1B|57476|GRAM domain containing 1B	0.776035	CTCF.p2:11:0.776
chr7	149157674	149157848	reg1020266.p1	6.846	+	AK098351 AK310453 AK310396 TSC_hg19_v1_chr7_+_148982401 AK303492	-175375	+	TSC_hg19_v1_chr7_+_148959286 AK131504 NM_001195220 BC131569 AB528912	-198441	+	TSC_hg19_v1_chr7_+_148936741 AK074821 NM_012256 BC022785 EU446738 CU692712	-220967	+	TSC_hg19_v1_chr7_-_149157908 AB033111 NM_015694	198	-	TSC_hg19_v1_chr7_-_149194795 BC068505 BC035586	37024	-	TSC_hg19_v1_chr7_-_149194830 AK291814	37079	-	AK098351|LOC155060|155060|AI894139 pseudogene##AK310453|LOC155060|155060|AI894139 pseudogene##AK310396|LOC155060|155060|AI894139 pseudogene##AK303492|LOC155060|155060|AI894139 pseudogene##NM_001195220|ZNF783|100289678|zinc finger family member 783##AK074821|ZNF212|7988|zinc finger protein 212##NM_012256|ZNF212|7988|zinc finger protein 212##BC022785|ZNF212|7988|zinc finger protein 212##EU446738|ZNF212|7988|zinc finger protein 212##AB033111|ZNF777|27153|zinc finger protein 777##NM_015694|ZNF777|27153|zinc finger protein 777##BC068505|ZNF746|155061|zinc finger protein 746##BC035586|ZNF746|155061|zinc finger protein 746##AK291814|ZNF746|155061|zinc finger protein 746	0.015975	
chr13	89632189	89632307	reg1018661.p1	6.845	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-1307379	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-3258809	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-5175748	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	2418656	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	4247179	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	5499578	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.390362	CTCF.p2:35:0.374
chr2	74214729	74214841	reg1020452.p2	6.845	+	TSC_hg19_v1_chr2_+_74154019 X97386	-60739	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-60785	+	TSC_hg19_v1_chr2_+_74153968 NM_080916 NM_080918	-60835	+	NM_144993	58664	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	160233	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	160435	+	X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##NM_080916|DGUOK|1716|deoxyguanosine kinase##NM_080918|DGUOK|1716|deoxyguanosine kinase##NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.0	
chr3	128565105	128565270	reg1013885.p2	6.845	+	TSC_hg19_v1_chr3_+_128532268 AF119891	-32852	+	TSC_hg19_v1_chr3_+_128445036 AK298344	-120150	+	TSC_hg19_v1_chr3_+_128445035 AK000826 AK308934 BC008721	-120153	+	NM_014049 TSC_hg19_v1_chr3_+_128598429	33194	+	TSC_hg19_v1_chr3_+_128598453 BC007970	33261	+	AK130311 TSC_hg19_v1_chr3_+_128598469 AK297952 AK310644	33277	+	AK298344|RAB7A|7879|RAB7A, member RAS oncogene family##AK000826|RAB7A|7879|RAB7A, member RAS oncogene family##AK308934|RAB7A|7879|RAB7A, member RAS oncogene family##BC008721|RAB7A|7879|RAB7A, member RAS oncogene family##NM_014049|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##BC007970|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK130311|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK297952|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK310644|ACAD9|28976|acyl-CoA dehydrogenase family, member 9	0.150507	
chr16	73912662	73912759	reg1019309.p1	6.844	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-820124	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-830489	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-921005	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	417983	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	418061	+	TSC_hg19_v1_chr16_-_74401811 AK124154	489102	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.978233	CTCF.p2:14:0.978
chr3	30821344	30821449	reg1018467.p1	6.844	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-172993	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-173374	+	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	-1498432	+	AL832766 NM_207359	114756	-	TSC_hg19_v1_chr3_+_31574119 AK311488	752734	+	TSC_hg19_v1_chr3_+_31574468 AK074587	753053	+	D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.942348	CTCF.p2:-28:0.942
chr5	38922334	38922462	reg1020663.p1	6.844	+	TSC_hg19_v1_chr5_+_38846260 BC125209 BC125210	-76103	+	TSC_hg19_v1_chr5_+_38846113 NM_003999 BC010943 U60805 AK304016 BC063468	-76324	+	NM_001168355 TSC_hg19_v1_chr5_+_38845959	-76439	+	CU688716 DQ891672 DQ894858 TSC_hg19_v1_chr5_-_39074493 AK128358 CR749280	152087	-	TSC_hg19_v1_chr5_-_39074499 AY515854 BC029608 BC137163 BC137164 BC144509 NM_152756	152099	-	AF198052 U93049 AF001862 TSC_hg19_v1_chr5_-_39203164	280719	-	BC125209|OSMR|9180|oncostatin M receptor##BC125210|OSMR|9180|oncostatin M receptor##NM_003999|OSMR|9180|oncostatin M receptor##BC010943|OSMR|9180|oncostatin M receptor##U60805|OSMR|9180|oncostatin M receptor##AK304016|OSMR|9180|oncostatin M receptor##BC063468|OSMR|9180|oncostatin M receptor##NM_001168355|OSMR|9180|oncostatin M receptor##DQ891672|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##DQ894858|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AK128358|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##CR749280|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AY515854|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC029608|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137163|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137164|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC144509|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##NM_152756|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AF198052|FYB|2533|FYN binding protein##U93049|FYB|2533|FYN binding protein##AF001862|FYB|2533|FYN binding protein	0.993276	CTCF.p2:10:0.993
chr6	54934102	54934195	reg1018223.p1	6.844	+	AK055204 NM_001010872 BC101628 BC112275	-222560	+	BC070278 NM_014464 AK312918 BC056235 AB022277 AF195116 AF195117 CU687080 CU691132 EU832329 EU832414	-760873	+	NM_138569 BX647567 AK055530	-1050398	+	NM_001526 AK314279	104946	+	AY358198 NM_207410	258118	+	CU692876 AL137605 AK293856 BC024194 AK055075 AK297191 AK294210 AK127587 NM_001042406 NM_019036	509784	-	AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B##BC070278|TINAG|27283|tubulointerstitial nephritis antigen##NM_014464|TINAG|27283|tubulointerstitial nephritis antigen##AK312918|TINAG|27283|tubulointerstitial nephritis antigen##BC056235|TINAG|27283|tubulointerstitial nephritis antigen##AB022277|TINAG|27283|tubulointerstitial nephritis antigen##AF195116|TINAG|27283|tubulointerstitial nephritis antigen##AF195117|TINAG|27283|tubulointerstitial nephritis antigen##EU832329|TINAG|27283|tubulointerstitial nephritis antigen##EU832414|TINAG|27283|tubulointerstitial nephritis antigen##NM_138569|MLIP|90523|muscular LMNA-interacting protein##BX647567|MLIP|90523|muscular LMNA-interacting protein##AK055530|MLIP|90523|muscular LMNA-interacting protein##NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2##AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2##AY358198|GFRAL|389400|GDNF family receptor alpha like##NM_207410|GFRAL|389400|GDNF family receptor alpha like##AL137605|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK293856|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##BC024194|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK055075|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK297191|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK294210|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK127587|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_001042406|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_019036|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1	0.9997	CTCF.p2:13:1.000
chr9	15642452	15642589	reg1021187.p1	6.844	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-89499	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-131560	-	AF098483 AF098482 NM_021144	-132273	-	TSC_hg19_v1_chr9_-_16727889 AY438376	1085377	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	1228147	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	1228246	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.963832	CTCF.p2:22:0.964
chrX	115004816	115004916	reg1006736.p3	6.844	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-176998	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-207824	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-209260	+	BC003645 TSC_hg19_v1_chrX_-_115085443	80573	-	AK313927 NM_000686 X87723 U16957	297129	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	562901	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr3	17728227	17728375	reg1020802.p1	6.843	+	BC036392 NM_015184	-753720	+	AB029015 NM_001144382	-801850	+	U65918 U66726 U66078 BC027595 NM_001351	-1081335	-	AK310539 NM_001134381	13210	-	D86965 NM_014744	54097	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	55866	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.908227	CTCF.p2:16:0.908
chr5	69140013	69140158	reg1024546.p1	6.843	+	TSC_hg19_v1_chr5_+_68856071 AF078847 AK292361 BC065021 NM_001042490 BC064557 U21911 BC157894 BC171919 BC171860	-283979	+	BC105980 TSC_hg19_v1_chr5_+_68856047 BX537982 AK315282 NM_001098728 BX647445	-284044	+	NM_001205255 FJ786083 FJ786084 GQ225096 GQ225097 GQ225098 GQ402517 AB587564 DQ892423 DQ895637 AB451306 AB451437	-340048	+	NM_021967 NM_022968 BC021174 NM_001178087 NM_022978 AF073519 AF073518 BC035932 BC093880 BC171749 BC101970 BC103687 BC104738 BC143260 BC093882 BC143255	181080	+	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	205347	+	TSC_hg19_v1_chr5_+_69696959 AK097091	556834	+	AF078847|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AK292361|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC065021|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##NM_001042490|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##BC064557|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##U21911|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##BC157894|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC171919|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##BC171860|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC105980|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BX537982|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##AK315282|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##NM_001098728|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BX647445|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##NM_001205255|OCLN|100506658|occludin##FJ786083|OCLN|100506658|occludin##FJ786084|OCLN|100506658|occludin##GQ225096|OCLN|100506658|occludin##GQ225097|OCLN|100506658|occludin##GQ225098|OCLN|100506658|occludin##GQ402517|OCLN|100506658|occludin##DQ892423|OCLN|100506658|occludin##DQ895637|OCLN|100506658|occludin##AB451306|OCLN|100506658|occludin##AB451437|OCLN|100506658|occludin##NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric##AK097091|SMA4|11039|glucuronidase, beta pseudogene	0.98704	CTCF.p2:17:0.987
chr1	4838136	4838302	reg1022578.p1	6.842	+	AY282806 NM_001042478 NM_018836	-123115	+	TSC_hg19_v1_chr1_+_4714668 AF175409	-123490	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-1021374	-	NM_001199861	1214138	+	TSC_hg19_v1_chr1_-_6052456 AY118228	1214226	-	TSC_hg19_v1_chr1_-_6052507 AK124074 AK314326 AF537130 BC040520 NM_015102	1214290	-	AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##AF175409|AJAP1|55966|adherens junctions associated protein 1##BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AY118228|NPHP4|261734|nephronophthisis 4##AK124074|NPHP4|261734|nephronophthisis 4##AK314326|NPHP4|261734|nephronophthisis 4##AF537130|NPHP4|261734|nephronophthisis 4##BC040520|NPHP4|261734|nephronophthisis 4##NM_015102|NPHP4|261734|nephronophthisis 4	0.762676	CTCF.p2:5:0.763
chr21	39014922	39015068	reg1018377.p1	6.842	+	NM_130438 NM_001396 U52373 D85759 U58496	-222375	+	D86550 NM_130436	-223789	+	AF108830 NM_101395 AB015283 AB015284	-275125	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	273716	-	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	478406	-	BC013327 NM_002243	613668	+	NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.817095	CTCF.p2:34:0.817
chr5	69696741	69696901	reg1021509.p1	6.842	+	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	-351389	+	NM_021967 NM_022968 BC021174 NM_001178087 NM_022978 AF073519 AF073518 BC035932 BC093880 BC171749 BC101970 BC103687 BC104738 BC143260 BC093882 BC143255	-375656	+	TSC_hg19_v1_chr5_+_68856071 AF078847 AK292361 BC065021 NM_001042490 BC064557 U21911 BC157894 BC171919 BC171860	-840715	+	TSC_hg19_v1_chr5_+_69696959 AK097091	98	+	TSC_hg19_v1_chr5_-_69882021 AK097091	185209	-	NM_021967 NM_022968 BC021174 NM_001178087 NM_022978 AF073519 AF073518 BC035932 BC093880 BC171749 BC101970 BC103687 BC104738 BC143260 BC093882 BC143255	499762	+	NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric##NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF078847|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AK292361|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC065021|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##NM_001042490|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##BC064557|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##U21911|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##BC157894|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC171919|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##BC171860|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##AK097091|SMA4|11039|glucuronidase, beta pseudogene##AK097091|SMA4|11039|glucuronidase, beta pseudogene##NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)	0.98704	CTCF.p2:9:0.987
chr7	117993054	117993149	reg1020761.p1	6.842	+	NM_019644 AK302407	-128367	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-168930	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-479558	-	AK307139 AB028967 NM_012281	1920603	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	2504919	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	2505059	-	NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12	0.99498	CTCF.p2:-2:0.995
chr9	129452763	129452889	reg1020370.p1	6.842	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	-76065	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-363659	+	AK309713 NM_001134778	-942349	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	114484	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	170118	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	224278	+	NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	0.999744	CTCF.p2:4:1.000
chrX	25039094	25039260	reg1019480.p1	6.842	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-5104	-	BC169334 TSC_hg19_v1_chrX_-_25031209	-7984	-	NM_016937 X06745 TSC_hg19_v1_chrX_+_24712066	-327112	+	NM_173699 BC029525 AK057361	1117309	+	AK097561 BC067286 NM_173523	1171379	+	BC157859 NM_001136533	2725748	+	NM_139058|ARX|170302|aristaless related homeobox##BC169334|ARX|170302|aristaless related homeobox##NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2	0.70669	CTCF.p2:-8:0.707
chr10	112601668	112601848	reg1020940.p1	6.841	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-197629	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-257643	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-274266	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	29854	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	29956	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	76938	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.0	
chr1	203562896	203562992	reg1019696.p1	6.841	+	AJ133790 AY077681 NM_014359 AF161702	-99663	+	U29089 BC032498 TSC_hg19_v1_chr1_+_203444965	-117984	+	NM_002725 NM_201348 TSC_hg19_v1_chr1_+_203444937	-118035	+	TSC_hg19_v1_chr1_+_203595922 NM_001001396 NM_001684	32965	+	TSC_hg19_v1_chr1_+_203595959 CR936708 CR749393	33015	+	TSC_hg19_v1_chr1_+_203596243 BC140774	33288	+	AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin##U29089|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##BC032498|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_002725|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_201348|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_001001396|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_001684|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR936708|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR749393|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##BC140774|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4	0.468787	CTCF.p2:-2:0.382
chr19	19517876	19517987	reg1018778.p2	6.841	+	TSC_hg19_v1_chr19_+_19496634 NM_017660 AK303482	-21225	+	TSC_hg19_v1_chr19_+_19431662 AB385396	-86267	+	TSC_hg19_v1_chr19_+_19431637 NM_015329 AB020699	-86297	+	AB464723 DQ891603 DQ894797 AF329483 AK058166 AK313767 BC014611 NM_032037 AF348077	108434	-	TSC_hg19_v1_chr19_+_19626536 AF261134	108634	+	NM_015965 TSC_hg19_v1_chr19_+_19627033 BC009189 AK298891 AK293859 AK293965 BC000589 AF286697	109105	+	NM_017660|GATAD2A|54815|GATA zinc finger domain containing 2A##AK303482|GATAD2A|54815|GATA zinc finger domain containing 2A##NM_015329|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AB020699|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##DQ891603|TSSK6|83983|testis-specific serine kinase 6##DQ894797|TSSK6|83983|testis-specific serine kinase 6##AF329483|TSSK6|83983|testis-specific serine kinase 6##AK058166|TSSK6|83983|testis-specific serine kinase 6##AK313767|TSSK6|83983|testis-specific serine kinase 6##BC014611|TSSK6|83983|testis-specific serine kinase 6##NM_032037|TSSK6|83983|testis-specific serine kinase 6##AF348077|TSSK6|83983|testis-specific serine kinase 6##AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##NM_015965|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC009189|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AK293859|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC000589|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AF286697|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	0.62919	CTCF.p2:0:0.629
chr3	47323194	47323298	reg1020845.p1	6.841	+	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	-117807	-	TSC_hg19_v1_chr3_-_47098906 AK026837	-224303	-	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	-293776	+	BC015311 NM_001134878 NM_022342 NM_182902	1049	-	NM_025010 TSC_hg19_v1_chr3_+_47324433 AK023765 AK291477 AK295292 BX537953 BC015962 AB527175 AM393269 AM393767 BC032620	1182	+	AB040904 NM_015466 TSC_hg19_v1_chr3_+_47422510 AK055157 AK299906 AK295888 AK289502 AB025194 AF290614 AK295877 BC089042	99286	+	AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2##AK026837|SETD2|29072|SET domain containing 2##AK092871|NBEAL2|23218|neurobeachin-like 2##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9##NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)##AK023765|KLHL18|23276|kelch-like 18 (Drosophila)##AK291477|KLHL18|23276|kelch-like 18 (Drosophila)##AK295292|KLHL18|23276|kelch-like 18 (Drosophila)##BX537953|KLHL18|23276|kelch-like 18 (Drosophila)##BC015962|KLHL18|23276|kelch-like 18 (Drosophila)##AM393269|KLHL18|23276|kelch-like 18 (Drosophila)##AM393767|KLHL18|23276|kelch-like 18 (Drosophila)##BC032620|KLHL18|23276|kelch-like 18 (Drosophila)##AB040904|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_015466|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK055157|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK299906|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295888|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK289502|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AB025194|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AF290614|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295877|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##BC089042|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23	0.0	
chr8	76217613	76217723	reg1018989.p1	6.841	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-320759	+	CR749657 NM_015886	-480897	+	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	-954978	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	102520	+	BX571750 NM_004133 EU832451 HQ692842	234546	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	1375842	+	NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15##AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4	0.908055	CTCF.p2:2:0.908
chr4	159417321	159417434	reg1019905.p1	6.840	+	BC036551 BC048117 BC054487 TSC_hg19_v1_chr4_+_159131677 BC060875 BC035811 BC026318	-285703	+	NM_018342	-285977	+	AY358785 AK172805 BC043193 NM_001031700 NM_001128424	-323195	-	NM_001253727 NM_001253728 NM_001253729 NM_001253730 NM_001253732 NM_001253733 NM_021634 BX647985 BX647975 BX647980 AK307889 AK300379 AK312470 TSC_hg19_v1_chr4_+_159443033 AK295040 BC113617 BC143557 BC143558 BC143559 BC112142 BC143556 AK294694 AB208943 AF190500 AY899848 AY899849 AY899850 HQ258496	25619	+	TSC_hg19_v1_chr4_-_159593035 AK027539 BC065017 BC094775 NM_001008393	175713	-	TSC_hg19_v1_chr4_+_159593447 AK314803 NM_004453 BC011890 AK311435 BX538129 AK304838 S69232 EU093082 EU093083	176017	+	BC036551|TMEM144|55314|transmembrane protein 144##BC048117|TMEM144|55314|transmembrane protein 144##BC054487|TMEM144|55314|transmembrane protein 144##BC060875|TMEM144|55314|transmembrane protein 144##BC035811|TMEM144|55314|transmembrane protein 144##BC026318|TMEM144|55314|transmembrane protein 144##NM_018342|TMEM144|55314|transmembrane protein 144##AY358785|FAM198B|51313|family with sequence similarity 198, member B##AK172805|FAM198B|51313|family with sequence similarity 198, member B##BC043193|FAM198B|51313|family with sequence similarity 198, member B##NM_001031700|FAM198B|51313|family with sequence similarity 198, member B##NM_001128424|FAM198B|51313|family with sequence similarity 198, member B##NM_001253727|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253728|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253729|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253730|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253732|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253733|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_021634|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647985|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647975|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647980|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK307889|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK300379|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK312470|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK295040|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC113617|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143557|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143558|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143559|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC112142|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143556|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK294694|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AB208943|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AF190500|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899848|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899849|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899850|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##HQ258496|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK027539|C4orf46|201725|chromosome 4 open reading frame 46##BC065017|C4orf46|201725|chromosome 4 open reading frame 46##BC094775|C4orf46|201725|chromosome 4 open reading frame 46##NM_001008393|C4orf46|201725|chromosome 4 open reading frame 46##AK314803|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##NM_004453|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BC011890|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BX538129|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##AK304838|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##S69232|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093082|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093083|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase	0.576799	CTCF.p2:0:0.577
chr2	68822451	68822562	reg1020281.p1	6.839	+	TSC_hg19_v1_chr2_+_68694716 AK290841 NM_173545 AK308186 BC041144 CU691972	-127742	+	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	-128096	-	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	-230049	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	50447	+	NM_001007231 NM_001166277 AK297056 TSC_hg19_v1_chr2_+_68962066 AK310742 AK290396	139567	+	BC032222 NM_001166276 NM_014882 AK311669 TSC_hg19_v1_chr2_+_69002068 BC039591 AK297157 AK298669 D29642	179519	+	AK290841|APLF|200558|aprataxin and PNKP like factor##NM_173545|APLF|200558|aprataxin and PNKP like factor##AK308186|APLF|200558|aprataxin and PNKP like factor##BC041144|APLF|200558|aprataxin and PNKP like factor##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48##DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin##AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1##NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25##AK297056|ARHGAP25|9938|Rho GTPase activating protein 25##AK310742|ARHGAP25|9938|Rho GTPase activating protein 25##AK290396|ARHGAP25|9938|Rho GTPase activating protein 25##BC032222|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166276|ARHGAP25|9938|Rho GTPase activating protein 25##NM_014882|ARHGAP25|9938|Rho GTPase activating protein 25##AK311669|ARHGAP25|9938|Rho GTPase activating protein 25##BC039591|ARHGAP25|9938|Rho GTPase activating protein 25##AK297157|ARHGAP25|9938|Rho GTPase activating protein 25##AK298669|ARHGAP25|9938|Rho GTPase activating protein 25##D29642|ARHGAP25|9938|Rho GTPase activating protein 25	0.378562	CTCF.p2:3:0.379
chr9	18208269	18208395	reg1022792.p1	6.839	+	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	-629236	+	TSC_hg19_v1_chr9_+_17134988 AK303973 AK308837 BX647069 AK098502 NM_001114395 NM_017738	-1073315	+	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	-1337566	-	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	265756	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	265851	+	BC033489 AK292245 AK057474 NM_153707	824887	-	AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##AK303973|CNTLN|54875|centlein, centrosomal protein##AK308837|CNTLN|54875|centlein, centrosomal protein##BX647069|CNTLN|54875|centlein, centrosomal protein##AK098502|CNTLN|54875|centlein, centrosomal protein##NM_001114395|CNTLN|54875|centlein, centrosomal protein##NM_017738|CNTLN|54875|centlein, centrosomal protein##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1##BC033489|FAM154A|158297|family with sequence similarity 154, member A##AK292245|FAM154A|158297|family with sequence similarity 154, member A##AK057474|FAM154A|158297|family with sequence similarity 154, member A##NM_153707|FAM154A|158297|family with sequence similarity 154, member A	0.978945	CTCF.p2:18:0.979
chr12	77321074	77321197	reg1021043.p1	6.838	+	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-48352	-	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	-163109	+	TSC_hg19_v1_chr12_+_77157894 BC050324 AB023163	-163231	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	138154	-	NM_014903 AJ488201	903997	+	AK094616 NM_001135805	1936637	+	BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC050324|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB023163|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I	0.830446	CTCF.p2:23:0.830
chr15	99602301	99602402	reg1017993.p1	6.838	+	AK058162 NM_001167902	-51328	-	BC104743 BC104744 BC105686 NM_001102612	-53514	-	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-409595	+	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	42889	+	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	187355	-	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	189065	-	AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23	0.991164	CTCF.p2:-27:0.991
chr2	174749276	174749400	reg1020242.p1	6.838	+	TSC_hg19_v1_chr2_+_174219599 AY029179 NM_031942 NM_145810 AK027642 AK027628 BC027966 AK075134 AK297097 AK300949 AK297245 AL834186 CU693352 AB527763	-529725	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	-808690	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	-808792	+	AK023489 TSC_hg19_v1_chr2_-_174767427	18016	-	X68560 TSC_hg19_v1_chr2_-_174828559 M97191	79209	-	TSC_hg19_v1_chr2_-_174828899 AY070137 NM_001017371	79534	-	AY029179|CDCA7|83879|cell division cycle associated 7##NM_031942|CDCA7|83879|cell division cycle associated 7##NM_145810|CDCA7|83879|cell division cycle associated 7##AK027642|CDCA7|83879|cell division cycle associated 7##AK027628|CDCA7|83879|cell division cycle associated 7##BC027966|CDCA7|83879|cell division cycle associated 7##AK075134|CDCA7|83879|cell division cycle associated 7##AK297097|CDCA7|83879|cell division cycle associated 7##AK300949|CDCA7|83879|cell division cycle associated 7##AK297245|CDCA7|83879|cell division cycle associated 7##AL834186|CDCA7|83879|cell division cycle associated 7##AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##X68560|SP3|6670|Sp3 transcription factor##M97191|SP3|6670|Sp3 transcription factor##AY070137|SP3|6670|Sp3 transcription factor##NM_001017371|SP3|6670|Sp3 transcription factor	0.995374	CTCF.p2:-4:0.995
chr4	110348813	110348912	reg1019791.p1	6.838	+	AF293340 AF293341 NM_032518 NM_198721 TSC_hg19_v1_chr4_-_110223816	-125055	-	AK091888 AX747236 AK294072 AJ298293 AK294235 BC022526 NM_001146590 NM_001146627 NM_031279	-664719	-	AF068297 TSC_hg19_v1_chr4_+_109571786 AK312185 DQ893222 DQ896551 AF343342	-777067	+	TSC_hg19_v1_chr4_+_110354836 AJ131245	5985	+	TSC_hg19_v1_chr4_-_110354918 BC009800	6081	-	BC117135 BC143268 BC143269 BC143276 TSC_hg19_v1_chr4_+_110354970 NM_001042734 NM_006323	6086	+	AF293340|COL25A1|84570|collagen, type XXV, alpha 1##AF293341|COL25A1|84570|collagen, type XXV, alpha 1##NM_032518|COL25A1|84570|collagen, type XXV, alpha 1##NM_198721|COL25A1|84570|collagen, type XXV, alpha 1##AK091888|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294072|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AJ298293|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294235|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##BC022526|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146590|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146627|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_031279|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AF068297|OSTC|58505|oligosaccharyltransferase complex subunit##AK312185|OSTC|58505|oligosaccharyltransferase complex subunit##DQ893222|OSTC|58505|oligosaccharyltransferase complex subunit##DQ896551|OSTC|58505|oligosaccharyltransferase complex subunit##AF343342|OSTC|58505|oligosaccharyltransferase complex subunit##AJ131245|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC009800|1/2-SBSRNA4|100533182|lncRNA_BC009800##BC117135|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143268|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143269|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143276|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_001042734|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_006323|SEC24B|10427|SEC24 family, member B (S. cerevisiae)	0.998683	CTCF.p2:-2:0.999
chr4	110354686	110354814	reg1017883.p1	6.838	+	AF293340 AF293341 NM_032518 NM_198721 TSC_hg19_v1_chr4_-_110223816	-130943	-	AK091888 AX747236 AK294072 AJ298293 AK294235 BC022526 NM_001146590 NM_001146627 NM_031279	-670607	-	AF068297 TSC_hg19_v1_chr4_+_109571786 AK312185 DQ893222 DQ896551 AF343342	-782955	+	TSC_hg19_v1_chr4_+_110354836 AJ131245	97	+	TSC_hg19_v1_chr4_-_110354918 BC009800	193	-	BC117135 BC143268 BC143269 BC143276 TSC_hg19_v1_chr4_+_110354970 NM_001042734 NM_006323	198	+	AF293340|COL25A1|84570|collagen, type XXV, alpha 1##AF293341|COL25A1|84570|collagen, type XXV, alpha 1##NM_032518|COL25A1|84570|collagen, type XXV, alpha 1##NM_198721|COL25A1|84570|collagen, type XXV, alpha 1##AK091888|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294072|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AJ298293|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294235|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##BC022526|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146590|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146627|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_031279|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AF068297|OSTC|58505|oligosaccharyltransferase complex subunit##AK312185|OSTC|58505|oligosaccharyltransferase complex subunit##DQ893222|OSTC|58505|oligosaccharyltransferase complex subunit##DQ896551|OSTC|58505|oligosaccharyltransferase complex subunit##AF343342|OSTC|58505|oligosaccharyltransferase complex subunit##AJ131245|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC009800|1/2-SBSRNA4|100533182|lncRNA_BC009800##BC117135|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143268|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143269|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143276|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_001042734|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_006323|SEC24B|10427|SEC24 family, member B (S. cerevisiae)	1.036046	CTCF.p2:-25:0.998
chrX	103196291	103196429	reg1018509.p1	6.838	+	TSC_hg19_v1_chrX_-_103174133 AK026512	-22226	-	AK313425 TSC_hg19_v1_chrX_-_103087160 AB036693 BC041336 BC070069 BC018033 NM_016370	-109184	-	AK312340 TSC_hg19_v1_chrX_+_103031844 AK128782 AK295374 AK295388 M54927 M27110 BC095452	-164539	+	TSC_hg19_v1_chrX_+_103217225 BC093093 NM_194324 BC028039 BC054476 AK291479 BC029803 BC035660	20856	+	AY283370 BC118604 BC121816 BC038109 NM_001002916	71883	-	AK093522 AX748182 NM_001164416	98155	+	AK026512|LOC100128594|100128594|uncharacterized LOC100128594##AK313425|RAB9B|51209|RAB9B, member RAS oncogene family##AB036693|RAB9B|51209|RAB9B, member RAS oncogene family##BC041336|RAB9B|51209|RAB9B, member RAS oncogene family##BC070069|RAB9B|51209|RAB9B, member RAS oncogene family##NM_016370|RAB9B|51209|RAB9B, member RAS oncogene family##AK312340|PLP1|5354|proteolipid protein 1##AK128782|PLP1|5354|proteolipid protein 1##AK295374|PLP1|5354|proteolipid protein 1##AK295388|PLP1|5354|proteolipid protein 1##M54927|PLP1|5354|proteolipid protein 1##M27110|PLP1|5354|proteolipid protein 1##BC095452|PLP1|5354|proteolipid protein 1##BC093093|TMSB15B|286527|thymosin beta 15B##NM_194324|TMSB15B|286527|thymosin beta 15B##BC054476|TMSB15B|286527|thymosin beta 15B##AK291479|TMSB15B|286527|thymosin beta 15B##BC029803|TMSB15B|286527|thymosin beta 15B##BC035660|TMSB15B|286527|thymosin beta 15B##AY283370|H2BFWT|158983|H2B histone family, member W, testis-specific##BC118604|H2BFWT|158983|H2B histone family, member W, testis-specific##BC121816|H2BFWT|158983|H2B histone family, member W, testis-specific##BC038109|H2BFWT|158983|H2B histone family, member W, testis-specific##NM_001002916|H2BFWT|158983|H2B histone family, member W, testis-specific##AK093522|H2BFM|286436|H2B histone family, member M##NM_001164416|H2BFM|286436|H2B histone family, member M	0.972224	CTCF.p2:-7:0.972
chr10	81818705	81818822	reg1020839.p1	6.837	+	BC022318 NM_003019	-109903	-	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	-448059	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	-498612	-	TSC_hg19_v1_chr10_+_81838420 AK222536 AK023325 BC022252 NM_025125 CR457310	19673	+	BC066348 BC090922 NM_001012973	73494	+	BC117332 BC117334 TSC_hg19_v1_chr10_+_81892485	73694	+	BC022318|SFTPD|6441|surfactant protein D##NM_003019|SFTPD|6441|surfactant protein D##AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##AK222536|FAM213A|80195|family with sequence similarity 213, member A##AK023325|FAM213A|80195|family with sequence similarity 213, member A##BC022252|FAM213A|80195|family with sequence similarity 213, member A##NM_025125|FAM213A|80195|family with sequence similarity 213, member A##CR457310|FAM213A|80195|family with sequence similarity 213, member A##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9##BC117332|PLAC9|219348|placenta-specific 9##BC117334|PLAC9|219348|placenta-specific 9	0.323795	CTCF.p2:-1:0.324
chr12	127232185	127232340	reg1023389.p1	6.837	+	NM_052907	-1421101	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-1682194	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-1682321	+	NM_001136103	1519685	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	2076181	-	BC043528 TSC_hg19_v1_chr12_+_129337985	2105722	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.999887	CTCF.p2:12:1.000
chr1	214801608	214801716	reg1019322.p2	6.837	+	TSC_hg19_v1_chr1_+_214776585 U30872	-25044	+	TSC_hg19_v1_chr1_+_214776547 NM_016343 U19769 AK307690	-25141	+	TSC_hg19_v1_chr1_-_214724977 NM_005401	-76664	-	NM_001017424	377222	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	454948	+	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	939201	+	U30872|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##NM_016343|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##U19769|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##AK307690|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##NM_005401|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3	0.998906	CTCF.p2:20:0.999
chr16	89733570	89733687	reg1020474.p1	6.837	+	TSC_hg19_v1_chr16_+_89724475 AK125673	-9158	+	TSC_hg19_v1_chr16_+_89724243 AK056168 BC148299 NM_153025 AK128803 AK303024 BC045670	-9392	+	TSC_hg19_v1_chr16_-_89724128 NM_001083314 NM_002768 U58048	-9439	-	TSC_hg19_v1_chr16_+_89753087 AK298386 NM_001098533 NM_001160367 NM_052987 NM_052988 AK075036 L33264 AK295397	19451	+	TSC_hg19_v1_chr16_+_89753098 AB209829 BC017342 AK292351 BC093028 AK296631 AK290485 AF153430 AK312016 BC025301 BC032704	19481	+	TSC_hg19_v1_chr16_-_89768114 BC039608 BC053588 BC027606 NM_152339	34491	-	AK125673|C16orf55|124045|chromosome 16 open reading frame 55##AK056168|C16orf55|124045|chromosome 16 open reading frame 55##BC148299|C16orf55|124045|chromosome 16 open reading frame 55##NM_153025|C16orf55|124045|chromosome 16 open reading frame 55##AK128803|C16orf55|124045|chromosome 16 open reading frame 55##AK303024|C16orf55|124045|chromosome 16 open reading frame 55##BC045670|C16orf55|124045|chromosome 16 open reading frame 55##NM_001083314|CHMP1A|5119|charged multivesicular body protein 1A##NM_002768|CHMP1A|5119|charged multivesicular body protein 1A##U58048|CHMP1A|5119|charged multivesicular body protein 1A##AK298386|CDK10|8558|cyclin-dependent kinase 10##NM_001098533|CDK10|8558|cyclin-dependent kinase 10##NM_001160367|CDK10|8558|cyclin-dependent kinase 10##NM_052987|CDK10|8558|cyclin-dependent kinase 10##NM_052988|CDK10|8558|cyclin-dependent kinase 10##AK075036|CDK10|8558|cyclin-dependent kinase 10##L33264|CDK10|8558|cyclin-dependent kinase 10##AK295397|CDK10|8558|cyclin-dependent kinase 10##AB209829|CDK10|8558|cyclin-dependent kinase 10##BC017342|CDK10|8558|cyclin-dependent kinase 10##AK292351|CDK10|8558|cyclin-dependent kinase 10##BC093028|CDK10|8558|cyclin-dependent kinase 10##AK296631|CDK10|8558|cyclin-dependent kinase 10##AK290485|CDK10|8558|cyclin-dependent kinase 10##AF153430|CDK10|8558|cyclin-dependent kinase 10##AK312016|CDK10|8558|cyclin-dependent kinase 10##BC025301|CDK10|8558|cyclin-dependent kinase 10##BC032704|CDK10|8558|cyclin-dependent kinase 10##BC039608|SPATA2L|124044|spermatogenesis associated 2-like##BC053588|SPATA2L|124044|spermatogenesis associated 2-like##BC027606|SPATA2L|124044|spermatogenesis associated 2-like##NM_152339|SPATA2L|124044|spermatogenesis associated 2-like	0.830068	CTCF.p2:4:0.830
chr17	42750019	42750136	reg1020193.p1	6.837	+	TSC_hg19_v1_chr17_+_42733745 NM_001145080	-16325	+	TSC_hg19_v1_chr17_+_42634696 NM_001466 BC052266 L37882 BC113402 BC113404 AB017364 AB590852	-115251	+	TSC_hg19_v1_chr17_-_42580958 NM_001002909	-169105	-	TSC_hg19_v1_chr17_-_42767190 CU690504 BC023298 AL833590 AK056357 BC047776 BX648868 NM_001099225 NM_144609	17051	-	BC016158 NM_025104 NM_145663 AK303282 TSC_hg19_v1_chr17_+_42786023 AK023149 AF448801	35935	+	TSC_hg19_v1_chr17_+_42786060 BC033660	35985	+	NM_001145080|C17orf104|284071|chromosome 17 open reading frame 104##NM_001466|FZD2|2535|frizzled family receptor 2##BC052266|FZD2|2535|frizzled family receptor 2##L37882|FZD2|2535|frizzled family receptor 2##BC113402|FZD2|2535|frizzled family receptor 2##BC113404|FZD2|2535|frizzled family receptor 2##AB017364|FZD2|2535|frizzled family receptor 2##NM_001002909|GPATCH8|23131|G patch domain containing 8##BC023298|CCDC43|124808|coiled-coil domain containing 43##AL833590|CCDC43|124808|coiled-coil domain containing 43##AK056357|CCDC43|124808|coiled-coil domain containing 43##BC047776|CCDC43|124808|coiled-coil domain containing 43##BX648868|CCDC43|124808|coiled-coil domain containing 43##NM_001099225|CCDC43|124808|coiled-coil domain containing 43##NM_144609|CCDC43|124808|coiled-coil domain containing 43##BC016158|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##NM_025104|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##NM_145663|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##AK303282|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##AK023149|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##AF448801|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)	0.0	
chr5	93250891	93251033	reg1020986.p2	6.837	+	CU688688 EU446850 BC029532 AB527965 AK098546 NM_153216	-173710	-	AK309742 TSC_hg19_v1_chr5_-_92957232	-293751	-	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	-330294	+	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	196358	-	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	703295	-	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	703411	+	EU446850|POU5F2|134187|POU domain class 5, transcription factor 2##BC029532|POU5F2|134187|POU domain class 5, transcription factor 2##AK098546|POU5F2|134187|POU domain class 5, transcription factor 2##NM_153216|POU5F2|134187|POU domain class 5, transcription factor 2##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32	0.996689	CTCF.p2:28:0.997
chr9	18824213	18824332	reg1021514.p1	6.837	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	-350089	+	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	-350184	+	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	-1245176	+	BC033489 AK292245 AK057474 NM_153707	208947	-	TSC_hg19_v1_chr9_+_19049372 NM_006570	225091	+	TSC_hg19_v1_chr9_+_19049391 BC009990	225119	+	AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##BC033489|FAM154A|158297|family with sequence similarity 154, member A##AK292245|FAM154A|158297|family with sequence similarity 154, member A##AK057474|FAM154A|158297|family with sequence similarity 154, member A##NM_153707|FAM154A|158297|family with sequence similarity 154, member A##NM_006570|RRAGA|10670|Ras-related GTP binding A##BC009990|RRAGA|10670|Ras-related GTP binding A	0.013824	
chrX	48489869	48490036	reg1020546.p2	6.837	+	TSC_hg19_v1_chrX_+_48456558 DQ907254 DQ907255	-33371	+	TSC_hg19_v1_chrX_+_48456231 NM_001166426 AB529059 EU832660 EU832738	-33650	+	TSC_hg19_v1_chrX_+_48456189 BC080579 AF158978 BC067094	-33786	+	TSC_hg19_v1_chrX_+_48542182 NM_000377	52222	+	TSC_hg19_v1_chrX_+_48542206 BC002961 U12707 BC012738 U19927 EU176449 AB590224	52271	+	TSC_hg19_v1_chrX_+_48555124 AF019968 NM_003173 BC006238	65176	+	DQ907254|WDR13|64743|WD repeat domain 13##DQ907255|WDR13|64743|WD repeat domain 13##NM_001166426|WDR13|64743|WD repeat domain 13##EU832660|WDR13|64743|WD repeat domain 13##EU832738|WDR13|64743|WD repeat domain 13##BC080579|WDR13|64743|WD repeat domain 13##AF158978|WDR13|64743|WD repeat domain 13##BC067094|WDR13|64743|WD repeat domain 13##NM_000377|WAS|7454|Wiskott-Aldrich syndrome (eczema-thrombocytopenia)##BC002961|WAS|7454|Wiskott-Aldrich syndrome (eczema-thrombocytopenia)##U12707|WAS|7454|Wiskott-Aldrich syndrome (eczema-thrombocytopenia)##BC012738|WAS|7454|Wiskott-Aldrich syndrome (eczema-thrombocytopenia)##U19927|WAS|7454|Wiskott-Aldrich syndrome (eczema-thrombocytopenia)##EU176449|WAS|7454|Wiskott-Aldrich syndrome (eczema-thrombocytopenia)##AF019968|SUV39H1|6839|suppressor of variegation 3-9 homolog 1 (Drosophila)##NM_003173|SUV39H1|6839|suppressor of variegation 3-9 homolog 1 (Drosophila)##BC006238|SUV39H1|6839|suppressor of variegation 3-9 homolog 1 (Drosophila)	0.0	
chrX	15318184	15318364	reg1020101.p2	6.836	+	AK292270 NM_001168531	-29686	-	BC001244 AK000643 BC013172 NM_001031739 NM_001168530 NM_024087	-30042	-	AK093075 AX747905 NM_001177475	-414862	+	BX537853 NM_001012428	14406	-	AF425642 BC069340 BC103873 BC103874 BC103875 BX537857 NM_001201583 NM_080873	15461	-	AK290497 AK315063 TSC_hg19_v1_chrX_-_15353646 AK304144 D11466	35373	-	AK292270|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_001168531|ASB9|140462|ankyrin repeat and SOCS box containing 9##BC001244|ASB9|140462|ankyrin repeat and SOCS box containing 9##AK000643|ASB9|140462|ankyrin repeat and SOCS box containing 9##BC013172|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_001031739|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_001168530|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_024087|ASB9|140462|ankyrin repeat and SOCS box containing 9##AK093075|MOSPD2|158747|motile sperm domain containing 2##NM_001177475|MOSPD2|158747|motile sperm domain containing 2##BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11##NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11##AF425642|ASB11|140456|ankyrin repeat and SOCS box containing 11##BC069340|ASB11|140456|ankyrin repeat and SOCS box containing 11##BC103873|ASB11|140456|ankyrin repeat and SOCS box containing 11##BC103874|ASB11|140456|ankyrin repeat and SOCS box containing 11##BC103875|ASB11|140456|ankyrin repeat and SOCS box containing 11##BX537857|ASB11|140456|ankyrin repeat and SOCS box containing 11##NM_001201583|ASB11|140456|ankyrin repeat and SOCS box containing 11##NM_080873|ASB11|140456|ankyrin repeat and SOCS box containing 11##AK290497|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##AK315063|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##AK304144|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##D11466|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A	0.989023	CTCF.p2:-11:0.989
chr11	100553100	100553274	reg1018782.p1	6.835	+	AB013802 AB013803 NM_175566	-1126314	+	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	-1661438	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-4430013	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	4941	+	AK314174 AF247167 NM_032021	309577	+	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	446612	-	AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor	0.998632	CTCF.p2:1:0.999
chr14	57953637	57953757	reg1019692.p1	6.835	+	TSC_hg19_v1_chr14_+_57857318 BC118589 BC122557	-96365	+	AK296372 AK092674 AX747665 NM_001011713 TSC_hg19_v1_chr14_+_57857298 AK304257 AK307348	-96414	+	NM_018229 TSC_hg19_v1_chr14_+_57735754 AL136685 BC013174 AK225345 AK001675 AK303999	-217979	+	HQ258368 BC117405 BC143565 BC143566 BC143567 BC143568 AK307238 AK223127 AK001512 BC028060 NM_018168	6806	-	NM_001206920	378894	-	BC146861 BX161411 NM_001001872 AK292605 BX161448 TSC_hg19_v1_chr14_-_58618906	665159	-	BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK296372|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK092674|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##NM_001011713|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK304257|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK307348|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##NM_018229|MUDENG|55745|MU-2/AP1M2 domain containing, death-inducing##AL136685|MUDENG|55745|MU-2/AP1M2 domain containing, death-inducing##BC013174|MUDENG|55745|MU-2/AP1M2 domain containing, death-inducing##AK225345|MUDENG|55745|MU-2/AP1M2 domain containing, death-inducing##AK001675|MUDENG|55745|MU-2/AP1M2 domain containing, death-inducing##AK303999|MUDENG|55745|MU-2/AP1M2 domain containing, death-inducing##HQ258368|C14orf105|55195|chromosome 14 open reading frame 105##BC117405|C14orf105|55195|chromosome 14 open reading frame 105##BC143565|C14orf105|55195|chromosome 14 open reading frame 105##BC143566|C14orf105|55195|chromosome 14 open reading frame 105##BC143567|C14orf105|55195|chromosome 14 open reading frame 105##BC143568|C14orf105|55195|chromosome 14 open reading frame 105##AK307238|C14orf105|55195|chromosome 14 open reading frame 105##AK223127|C14orf105|55195|chromosome 14 open reading frame 105##AK001512|C14orf105|55195|chromosome 14 open reading frame 105##BC028060|C14orf105|55195|chromosome 14 open reading frame 105##NM_018168|C14orf105|55195|chromosome 14 open reading frame 105##NM_001206920|SLC35F4|341880|solute carrier family 35, member F4##BC146861|C14orf37|145407|chromosome 14 open reading frame 37##BX161411|C14orf37|145407|chromosome 14 open reading frame 37##NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37##AK292605|C14orf37|145407|chromosome 14 open reading frame 37##BX161448|C14orf37|145407|chromosome 14 open reading frame 37	0.99861	CTCF.p2:-26:0.999
chr17	49244548	49244677	reg1020392.p1	6.835	+	NM_001018138 TSC_hg19_v1_chr17_+_49244173 BT007045 CR541718	-476	+	TSC_hg19_v1_chr17_+_49243771 M36981 X58965 BC095458 NM_001018139 L16785 BC002476	-779	+	TSC_hg19_v1_chr17_+_49243768 D28391	-859	+	TSC_hg19_v1_chr17_-_49337405 BC034364 NM_017643 AK124061	92842	-	TSC_hg19_v1_chr17_+_49337888 AK026355	93274	+	TSC_hg19_v1_chr17_+_49337906 NM_016001	93287	+	NM_001018138|NME2|4831|non-metastatic cells 2, protein (NM23B) expressed in##BT007045|NME2|4831|non-metastatic cells 2, protein (NM23B) expressed in##CR541718|NME2|4831|non-metastatic cells 2, protein (NM23B) expressed in##M36981|NME2|4831|non-metastatic cells 2, protein (NM23B) expressed in##X58965|NME2|4831|non-metastatic cells 2, protein (NM23B) expressed in##BC095458|NME2|4831|non-metastatic cells 2, protein (NM23B) expressed in##NM_001018139|NME2|4831|non-metastatic cells 2, protein (NM23B) expressed in##L16785|NME2|4831|non-metastatic cells 2, protein (NM23B) expressed in##BC002476|NME2|4831|non-metastatic cells 2, protein (NM23B) expressed in##D28391|NME2|4831|non-metastatic cells 2, protein (NM23B) expressed in##BC034364|MBTD1|54799|mbt domain containing 1##NM_017643|MBTD1|54799|mbt domain containing 1##AK124061|MBTD1|54799|mbt domain containing 1##AK026355|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##NM_016001|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)	0.652033	CTCF.p2:-22:0.652
chr7	8458435	8458538	reg1020167.p1	6.835	+	TSC_hg19_v1_chr7_-_8302174 U38260 L01100 BC008640 BC005922 NM_004968	-156313	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	-156695	-	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	-156770	-	TSC_hg19_v1_chr7_+_8473238 AK095624	14752	+	AB047362 AB073665 NM_152745 TSC_hg19_v1_chr7_+_8473633	15124	+	AK315141 TSC_hg19_v1_chr7_+_8474016 AK091655 BC047505 AK296248	15634	+	U38260|ICA1|3382|islet cell autoantigen 1, 69kDa##L01100|ICA1|3382|islet cell autoantigen 1, 69kDa##BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa##BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##AK095624|NXPH1|30010|neurexophilin 1##AB047362|NXPH1|30010|neurexophilin 1##AB073665|NXPH1|30010|neurexophilin 1##NM_152745|NXPH1|30010|neurexophilin 1##AK315141|NXPH1|30010|neurexophilin 1##AK091655|NXPH1|30010|neurexophilin 1##BC047505|NXPH1|30010|neurexophilin 1##AK296248|NXPH1|30010|neurexophilin 1	0.97164	CTCF.p2:-8:0.972
chr1	32180077	32180193	reg1019036.p2	6.834	+	TSC_hg19_v1_chr1_-_32169619 NM_001856	-10442	-	M92642 TSC_hg19_v1_chr1_-_32169608	-10553	-	NM_012392	-69298	-	AB005298 NM_001703	49506	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	84105	-	TSC_hg19_v1_chr1_-_32264318 AK095829	84186	-	NM_001856|COL16A1|1307|collagen, type XVI, alpha 1##M92642|COL16A1|1307|collagen, type XVI, alpha 1##NM_012392|PEF1|553115|penta-EF-hand domain containing 1##AB005298|BAI2|576|brain-specific angiogenesis inhibitor 2##NM_001703|BAI2|576|brain-specific angiogenesis inhibitor 2##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1	0.092488	
chr20	13800957	13801061	reg1021696.p2	6.834	+	TSC_hg19_v1_chr20_+_13765698 NM_001039375 NM_024120 AK289781 AK091060 AX746757 BC073158 CU687252 BC005984	-35256	+	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	-35468	-	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	-181445	-	BC035741 AK302170 NM_025229	170249	-	AK131348 TSC_hg19_v1_chr20_+_13976161 NM_080676	175097	+	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	175327	+	NM_001039375|C20orf7|79133|chromosome 20 open reading frame 7##NM_024120|C20orf7|79133|chromosome 20 open reading frame 7##AK289781|C20orf7|79133|chromosome 20 open reading frame 7##AK091060|C20orf7|79133|chromosome 20 open reading frame 7##BC073158|C20orf7|79133|chromosome 20 open reading frame 7##BC005984|C20orf7|79133|chromosome 20 open reading frame 7##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AK131348|MACROD2|140733|MACRO domain containing 2##NM_080676|MACROD2|140733|MACRO domain containing 2##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2	0.982012	CTCF.p2:-1:0.982
chr6	154691802	154691925	reg1023829.p1	6.834	+	AK289917 AJ310566 NM_001130700 NM_015553 TSC_hg19_v1_chr6_-_154677938	-13948	-	BX647254 NM_001130699	-40649	-	EU360599 EU362990 NM_001145287	-284222	+	TSC_hg19_v1_chr6_-_154831690 BC060761	139808	-	TSC_hg19_v1_chr6_-_154831721 AY328891 AY328892 AY328893 NM_173515	139872	-	TSC_hg19_v1_chr6_-_154831788 AK055911	139939	-	AK289917|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##AJ310566|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130700|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_015553|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##BX647254|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130699|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##EU360599|OPRM1|4988|opioid receptor, mu 1##EU362990|OPRM1|4988|opioid receptor, mu 1##NM_001145287|OPRM1|4988|opioid receptor, mu 1##BC060761|CNKSR3|154043|CNKSR family member 3##AY328891|CNKSR3|154043|CNKSR family member 3##AY328892|CNKSR3|154043|CNKSR family member 3##AY328893|CNKSR3|154043|CNKSR family member 3##NM_173515|CNKSR3|154043|CNKSR family member 3##AK055911|CNKSR3|154043|CNKSR family member 3	0.987733	CTCF.p2:-3:0.988
chr8	156705	156875	reg1003175.p1	6.834	+	NM_001005504	-39767	-	None	None	None	None	None	None	AK127000 TSC_hg19_v1_chr8_-_182246 BC064938 BC052779	25482	-	NM_173539 AK093442 AX748129 TSC_hg19_v1_chr8_+_182396 AK313454 NM_001042415 NM_001042416 BC026190	25552	+	AF419858 NM_012173 NM_183420 NM_183421 TSC_hg19_v1_chr8_+_356923	200075	+	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21##AK127000|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC064938|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC052779|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##NM_173539|ZNF596|169270|zinc finger protein 596##AK313454|ZNF596|169270|zinc finger protein 596##NM_001042415|ZNF596|169270|zinc finger protein 596##NM_001042416|ZNF596|169270|zinc finger protein 596##BC026190|ZNF596|169270|zinc finger protein 596##AF419858|FBXO25|26260|F-box protein 25##NM_012173|FBXO25|26260|F-box protein 25##NM_183420|FBXO25|26260|F-box protein 25##NM_183421|FBXO25|26260|F-box protein 25	1.060995	CTCF.p2:-85:0.980
chr10	105093818	105093937	reg1021018.p1	6.833	+	TSC_hg19_v1_chr10_+_105037444 AB209785	-56423	+	TSC_hg19_v1_chr10_+_105036894 BC006359 NM_032727 S78296 DQ892733 DQ895980	-57004	+	BC157875 BC171885 NM_001143909 BC137242 BC137243 BC157829 BC171806	-88204	+	CU675723 AB587453 EU446621 EU447006 TSC_hg19_v1_chr10_-_105110840 BC007602 AB047006 AK027885	16955	-	AK290679 TSC_hg19_v1_chr10_-_105110844	16983	-	BC010235 NM_001011663 NM_032154 TSC_hg19_v1_chr10_-_105110895	17016	-	AB209785|INA|9118|internexin neuronal intermediate filament protein, alpha##BC006359|INA|9118|internexin neuronal intermediate filament protein, alpha##NM_032727|INA|9118|internexin neuronal intermediate filament protein, alpha##S78296|INA|9118|internexin neuronal intermediate filament protein, alpha##DQ892733|INA|9118|internexin neuronal intermediate filament protein, alpha##DQ895980|INA|9118|internexin neuronal intermediate filament protein, alpha##BC157875|LOC729020|729020|rcRPE##BC171885|LOC729020|729020|rcRPE##NM_001143909|LOC729020|729020|rcRPE##BC137242|LOC729020|729020|rcRPE##BC137243|LOC729020|729020|rcRPE##BC157829|LOC729020|729020|rcRPE##BC171806|LOC729020|729020|rcRPE##EU446621|PCGF6|84108|polycomb group ring finger 6##EU447006|PCGF6|84108|polycomb group ring finger 6##BC007602|PCGF6|84108|polycomb group ring finger 6##AB047006|PCGF6|84108|polycomb group ring finger 6##AK027885|PCGF6|84108|polycomb group ring finger 6##AK290679|PCGF6|84108|polycomb group ring finger 6##BC010235|PCGF6|84108|polycomb group ring finger 6##NM_001011663|PCGF6|84108|polycomb group ring finger 6##NM_032154|PCGF6|84108|polycomb group ring finger 6	0.998655	CTCF.p2:-1:0.999
chr11	62554682	62554850	reg1005212.p2	6.833	+	NM_006473 TSC_hg19_v1_chr11_+_62538867 AK289499 AK310054 AK301145 BC008785 AK314330	-15933	+	TSC_hg19_v1_chr11_+_62529051 AK312131 BC112162 BC112164 U20659 AB464043	-25682	+	NM_002696 TSC_hg19_v1_chr11_+_62529028	-25738	+	AK001998 TSC_hg19_v1_chr11_-_62554819	41	-	TSC_hg19_v1_chr11_+_62554875 NM_199337 BC051355	99	+	BC042801 TSC_hg19_v1_chr11_-_62559478 BC008643 BC094837 BC035565 BC020914 NM_001080501 BC127679	4691	-	NM_006473|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK289499|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK310054|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK301145|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##BC008785|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK314330|TAF6L|10629|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK312131|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##BC112162|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##BC112164|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##U20659|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##NM_002696|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##NM_199337|TMEM179B|374395|transmembrane protein 179B##BC051355|TMEM179B|374395|transmembrane protein 179B##BC042801|TMEM223|79064|transmembrane protein 223##BC008643|TMEM223|79064|transmembrane protein 223##BC094837|TMEM223|79064|transmembrane protein 223##BC035565|TMEM223|79064|transmembrane protein 223##BC020914|TMEM223|79064|transmembrane protein 223##NM_001080501|TMEM223|79064|transmembrane protein 223##BC127679|TMEM223|79064|transmembrane protein 223	0.0	
chr1	247739965	247740070	reg1020517.p1	6.833	+	AK311994 AK123798 BC024174 NM_145278 CU692858	-27573	+	BC030717 NM_198074	-42877	-	BC137203 BC137204 NM_001004698	-85648	+	NM_001001915	11644	+	BC136712 BC136713 NM_001001914	28854	+	AB529295 NM_001005487 BC136736 BC136738	96336	-	AK311994|C1orf150|148823|chromosome 1 open reading frame 150##AK123798|C1orf150|148823|chromosome 1 open reading frame 150##BC024174|C1orf150|148823|chromosome 1 open reading frame 150##NM_145278|C1orf150|148823|chromosome 1 open reading frame 150##BC030717|OR2C3|81472|olfactory receptor, family 2, subfamily C, member 3##NM_198074|OR2C3|81472|olfactory receptor, family 2, subfamily C, member 3##BC137203|OR2W5|441932|olfactory receptor, family 2, subfamily W, member 5##BC137204|OR2W5|441932|olfactory receptor, family 2, subfamily W, member 5##NM_001004698|OR2W5|441932|olfactory receptor, family 2, subfamily W, member 5##NM_001001915|OR2G2|81470|olfactory receptor, family 2, subfamily G, member 2##BC136712|OR2G3|81469|olfactory receptor, family 2, subfamily G, member 3##BC136713|OR2G3|81469|olfactory receptor, family 2, subfamily G, member 3##NM_001001914|OR2G3|81469|olfactory receptor, family 2, subfamily G, member 3##NM_001005487|OR13G1|441933|olfactory receptor, family 13, subfamily G, member 1##BC136736|OR13G1|441933|olfactory receptor, family 13, subfamily G, member 1##BC136738|OR13G1|441933|olfactory receptor, family 13, subfamily G, member 1	0.955771	CTCF.p2:0:0.956
chr4	48292492	48292632	reg1018958.p1	6.833	+	BC101711 BC101713 BC143487 NM_003215 TSC_hg19_v1_chr4_-_48271858	-20727	-	BC017829 L27071 NM_003328	-156304	-	TSC_hg19_v1_chr4_+_48018788 BC067881 CR749484 NM_207330 AK095299	-273759	+	BC040993 TSC_hg19_v1_chr4_+_48343485 AK291006	50849	+	TSC_hg19_v1_chr4_+_48343571 BC006139 BC007701 BC012067 NM_020846 AB040891	51051	+	TSC_hg19_v1_chr4_+_48485353 AK126542 NM_152679 BC019066 BC012048 DQ892628 EU176704 AY704414	192865	+	BC101711|TEC|7006|tec protein tyrosine kinase##BC101713|TEC|7006|tec protein tyrosine kinase##BC143487|TEC|7006|tec protein tyrosine kinase##NM_003215|TEC|7006|tec protein tyrosine kinase##BC017829|TXK|7294|TXK tyrosine kinase##L27071|TXK|7294|TXK tyrosine kinase##NM_003328|TXK|7294|TXK tyrosine kinase##BC067881|NIPAL1|152519|NIPA-like domain containing 1##CR749484|NIPAL1|152519|NIPA-like domain containing 1##NM_207330|NIPAL1|152519|NIPA-like domain containing 1##AK095299|NIPAL1|152519|NIPA-like domain containing 1##BC040993|SLAIN2|57606|SLAIN motif family, member 2##AK291006|SLAIN2|57606|SLAIN motif family, member 2##BC006139|SLAIN2|57606|SLAIN motif family, member 2##BC007701|SLAIN2|57606|SLAIN motif family, member 2##BC012067|SLAIN2|57606|SLAIN motif family, member 2##NM_020846|SLAIN2|57606|SLAIN motif family, member 2##AB040891|SLAIN2|57606|SLAIN motif family, member 2##AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4	0.694132	CTCF.p2:34:0.694
chr14	96146869	96146979	reg1019471.p2	6.832	+	TSC_hg19_v1_chr14_+_96001402 DQ083331	-145491	+	AB223038 TSC_hg19_v1_chr14_+_96001383	-145541	+	TSC_hg19_v1_chr14_+_96001362 BX248075 BC023528 BC047680	-145556	+	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	5854	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	33543	-	AK023027 TSC_hg19_v1_chr14_+_96342762	195821	+	DQ083331|GLRX5|51218|glutaredoxin 5##AB223038|GLRX5|51218|glutaredoxin 5##BX248075|GLRX5|51218|glutaredoxin 5##BC023528|GLRX5|51218|glutaredoxin 5##BC047680|GLRX5|51218|glutaredoxin 5##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##AK023027|LOC100507043|100507043|uncharacterized LOC100507043	0.448824	CTCF.p2:1:0.214	CTCF.p2:-65:0.235
chr5	124060733	124060914	reg1021100.p2	6.832	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1212941	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1301679	-	NM_001136239 AK297992 AF272898 AF272899	-1635979	+	BC131507 AB033107 BC151226 NM_020747	19965	-	NM_001146319 AK316288 AK300154	1634991	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1698020	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.073571	
chr6_ssto_hap7	1043721	1043839	reg1019059.p1	6.832	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.95313	CTCF.p2:-10:0.953
chr1	242011116	242011244	reg1023086.p1	6.831	+	AK122927 NM_144625	-195601	+	TSC_hg19_v1_chr1_-_241803669 BC051900 AF140242 BC073872 BC062622 AF303588 BC036773 BC026242 NM_014322	-207705	-	BC117360 NM_001821 X64728	-212014	-	TSC_hg19_v1_chr1_+_242011520 NM_130398 AK291291	324	+	BC007491 TSC_hg19_v1_chr1_+_242011556	370	+	NM_003686 NM_006027 AF042282 AF091740 AF060479 AF084974	905	+	AK122927|WDR64|128025|WD repeat domain 64##NM_144625|WDR64|128025|WD repeat domain 64##BC051900|OPN3|23596|opsin 3##AF140242|OPN3|23596|opsin 3##BC073872|OPN3|23596|opsin 3##BC062622|OPN3|23596|opsin 3##AF303588|OPN3|23596|opsin 3##BC036773|OPN3|23596|opsin 3##NM_014322|OPN3|23596|opsin 3##BC117360|CHML|1122|choroideremia-like (Rab escort protein 2)##NM_001821|CHML|1122|choroideremia-like (Rab escort protein 2)##X64728|CHML|1122|choroideremia-like (Rab escort protein 2)##NM_130398|EXO1|9156|exonuclease 1##AK291291|EXO1|9156|exonuclease 1##BC007491|EXO1|9156|exonuclease 1##NM_003686|EXO1|9156|exonuclease 1##NM_006027|EXO1|9156|exonuclease 1##AF042282|EXO1|9156|exonuclease 1##AF091740|EXO1|9156|exonuclease 1##AF060479|EXO1|9156|exonuclease 1##AF084974|EXO1|9156|exonuclease 1	0.0	
chr1	42220258	42220392	reg1020347.p1	6.831	+	BC034393 X55177 M65199 NM_001956	-270006	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-512489	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-512540	-	TSC_hg19_v1_chr1_-_42384357 BC040942	164017	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	164048	-	TSC_hg19_v1_chr1_-_42501606 BC046120	281304	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.488844	CTCF.p2:-15:0.489
chr2	156233791	156233904	reg1018902.p1	6.831	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-678658	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-1505403	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-1898596	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	952843	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	955316	-	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	1058111	+	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	0.683214	CTCF.p2:24:0.683
chr7	5526455	5526635	reg1000527.p1	6.831	+	NM_001080495	-63369	-	AY129022 TSC_hg19_v1_chr7_-_5461555	-65004	-	TSC_hg19_v1_chr7_-_5460842 BC140723	-65639	-	CU692902 TSC_hg19_v1_chr7_-_5553380 AK057042 BC006426 BC024256 NM_024963	26806	-	TSC_hg19_v1_chr7_-_5553435 AK130444 AK294949	26882	-	M28424 V00478 TSC_hg19_v1_chr7_-_5567980 HQ154074 DQ407611 EF036500	41467	-	NM_001080495|TNRC18|84629|trinucleotide repeat containing 18##AY129022|TNRC18|84629|trinucleotide repeat containing 18##AK057042|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC006426|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC024256|FBXL18|80028|F-box and leucine-rich repeat protein 18##NM_024963|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK130444|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK294949|FBXL18|80028|F-box and leucine-rich repeat protein 18##M28424|ACTB|60|actin, beta##V00478|ACTB|60|actin, beta##DQ407611|ACTB|60|actin, beta##EF036500|ACTB|60|actin, beta	0.0	
chr8	118627694	118627814	reg1021302.p1	6.830	+	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	-94712	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	-94796	+	NM_001172814 NM_173851	-480418	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	496207	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	1006371	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	1006453	-	BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##NM_080651|MED30|90390|mediator complex subunit 30##NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12	0.0	
chr11	107787428	107787536	reg1021258.p1	6.829	+	NM_017515	-57569	-	AK300582 TSC_hg19_v1_chr11_-_107729530 BC039195	-57894	-	CU691672 TSC_hg19_v1_chr11_-_107729514 AK023080 BC048302	-57977	-	TSC_hg19_v1_chr11_+_107799171 AK292969 BC028064 NM_017516 X99962	11753	+	NM_003478 AK125294	91950	+	TSC_hg19_v1_chr11_+_107879644 AK292575 BC063306	92145	+	NM_017515|SLC35F2|54733|solute carrier family 35, member F2##AK300582|SLC35F2|54733|solute carrier family 35, member F2##BC039195|SLC35F2|54733|solute carrier family 35, member F2##AK023080|SLC35F2|54733|solute carrier family 35, member F2##BC048302|SLC35F2|54733|solute carrier family 35, member F2##AK292969|RAB39A|54734|RAB39A, member RAS oncogene family##BC028064|RAB39A|54734|RAB39A, member RAS oncogene family##NM_017516|RAB39A|54734|RAB39A, member RAS oncogene family##X99962|RAB39A|54734|RAB39A, member RAS oncogene family##NM_003478|CUL5|8065|cullin 5##AK125294|CUL5|8065|cullin 5##AK292575|CUL5|8065|cullin 5##BC063306|CUL5|8065|cullin 5	0.969599	CTCF.p2:3:0.970
chr1	156931569	156931740	reg1020234.p1	6.829	+	AK292342 NM_144702 BC033790	-41222	+	NM_001080471	-68132	+	M23102 TSC_hg19_v1_chr1_+_156830655 BC136554 BC144239 NM_001012331 NM_002529 AK290759 AK312704 BC062580	-100988	+	BC057394 NM_014784 NM_198236	83507	-	AK131392 NM_001004341	137945	-	TSC_hg19_v1_chr1_-_157108158 L16464	176496	-	AK292342|LRRC71|149499|leucine rich repeat containing 71##NM_144702|LRRC71|149499|leucine rich repeat containing 71##BC033790|LRRC71|149499|leucine rich repeat containing 71##NM_001080471|PEAR1|375033|platelet endothelial aggregation receptor 1##M23102|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC136554|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC144239|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001012331|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_002529|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK290759|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK312704|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC062580|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC057394|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_014784|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_198236|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##L16464|ETV3|2117|ets variant 3	1.09047	CTCF.p2:-26:0.302	CTCF.p2:48:0.789
chr12	50482516	50482633	reg1022248.p1	6.829	+	TSC_hg19_v1_chr12_+_50479124 AK292700 AK293932 AK130517 AB527887 CU679327 EU447009 BC000063 AF109733	-3461	+	TSC_hg19_v1_chr12_+_50479018 NM_003076 NM_139071 U66617 BC009368	-3587	+	NM_001095 NM_020039 U78180 U78181 BC028722 AK290010	-31013	+	AK130162 TSC_hg19_v1_chr12_+_50497790 BC032234 NM_005276 AK295911 L34041 AK312516 DQ890626 DQ893793 CU689308	15237	+	TSC_hg19_v1_chr12_+_50506018 BC007849 NM_032901 AK312180	23342	+	AB527479 TSC_hg19_v1_chr12_-_50561095 AK294521 BC014637 AK300937 NM_147190 BC033558	78517	-	AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##NM_001095|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##NM_020039|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78180|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##U78181|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##BC028722|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##AK290010|ACCN2|41|amiloride-sensitive cation channel 2, neuronal##AK130162|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##BC032234|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##NM_005276|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##AK295911|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##L34041|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##AK312516|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##DQ890626|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##DQ893793|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##BC007849|C12orf62|84987|chromosome 12 open reading frame 62##NM_032901|C12orf62|84987|chromosome 12 open reading frame 62##AK312180|C12orf62|84987|chromosome 12 open reading frame 62##AK294521|CERS5|91012|ceramide synthase 5##BC014637|CERS5|91012|ceramide synthase 5##AK300937|CERS5|91012|ceramide synthase 5##NM_147190|CERS5|91012|ceramide synthase 5##BC033558|CERS5|91012|ceramide synthase 5	0.998836	CTCF.p2:0:0.999
chr14	52598542	52598672	reg1018049.p1	6.829	+	NM_007361 TSC_hg19_v1_chr14_-_52536023	-62622	-	BC035608 TSC_hg19_v1_chr14_-_52535777 AK291652	-62833	-	TSC_hg19_v1_chr14_-_52535737 AK300462	-62857	-	BC040968 NM_000953 AB464671 EF577397	135874	+	TSC_hg19_v1_chr14_+_52781029 NM_000956 U19487 BC093927 BC093929 AY275471 X83868	182528	+	TSC_hg19_v1_chr14_-_53019222 AK097748 BC137081 BC137082 BC144469 AB037765 BC152428 BC150205 BC142650 NM_001160047 NM_020784	420565	-	NM_007361|NID2|22795|nidogen 2 (osteonidogen)##BC035608|NID2|22795|nidogen 2 (osteonidogen)##AK291652|NID2|22795|nidogen 2 (osteonidogen)##AK300462|NID2|22795|nidogen 2 (osteonidogen)##BC040968|PTGDR|5729|prostaglandin D2 receptor (DP)##NM_000953|PTGDR|5729|prostaglandin D2 receptor (DP)##EF577397|PTGDR|5729|prostaglandin D2 receptor (DP)##NM_000956|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##U19487|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##BC093927|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##BC093929|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##AY275471|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##X83868|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##AK097748|TXNDC16|57544|thioredoxin domain containing 16##BC137081|TXNDC16|57544|thioredoxin domain containing 16##BC137082|TXNDC16|57544|thioredoxin domain containing 16##BC144469|TXNDC16|57544|thioredoxin domain containing 16##AB037765|TXNDC16|57544|thioredoxin domain containing 16##BC152428|TXNDC16|57544|thioredoxin domain containing 16##BC150205|TXNDC16|57544|thioredoxin domain containing 16##BC142650|TXNDC16|57544|thioredoxin domain containing 16##NM_001160047|TXNDC16|57544|thioredoxin domain containing 16##NM_020784|TXNDC16|57544|thioredoxin domain containing 16	0.967783	CTCF.p2:10:0.968
chr17	40270749	40270876	reg1020106.p1	6.829	+	BC014949 AK296840 AK300900 AK021416 AK225549 NM_024119	-6094	-	NM_001242704	-80769	-	TSC_hg19_v1_chr17_+_40172124 AK027265 AK297975 AK054571 BC007316 BC007450	-98666	+	TSC_hg19_v1_chr17_-_40273386 AB527835 AF029777 BC032743 BC105977 BC039907 NM_021078	2537	-	NM_033194 BC093991 BC093993 AK130947	3989	+	TSC_hg19_v1_chr17_-_40306986 U18420	36149	-	BC014949|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK296840|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK300900|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK021416|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK225549|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_024119|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_001242704|ZNF385C|201181|zinc finger protein 385C##AK027265|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK297975|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK054571|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007316|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007450|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AF029777|KAT2A|2648|K(lysine) acetyltransferase 2A##BC032743|KAT2A|2648|K(lysine) acetyltransferase 2A##BC105977|KAT2A|2648|K(lysine) acetyltransferase 2A##BC039907|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_021078|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_033194|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093991|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093993|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##AK130947|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##U18420|RAB5C|5878|RAB5C, member RAS oncogene family	0.75777	CTCF.p2:-23:0.743
chr15	64183532	64183691	reg1002693.p2	6.828	+	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-57471	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-57491	-	TSC_hg19_v1_chr15_-_64126081 U50078	-57527	-	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	154999	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	202486	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	204529	+	AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1	0.0	
chr10	1156163	1156299	reg1020657.p1	6.827	+	TSC_hg19_v1_chr10_+_1102822 AK292591	-53405	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-53462	+	BC057827 TSC_hg19_v1_chr10_-_1102645	-53579	-	AF034837 NM_018702	623438	-	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	1953516	+	AK092597 AX747622 NM_001242339	1954587	+	AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC057827|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet	0.945947	CTCF.p2:-26:0.946
chr15	45997961	45998115	reg1022718.p1	6.827	+	TSC_hg19_v1_chr15_+_45927245 AK222463 AF042284 NM_021199 AF151802 AK313111 BC016836	-70789	+	TSC_hg19_v1_chr15_+_45879759 AK128626	-118265	+	TSC_hg19_v1_chr15_+_45879576 AK057545 BC004819 AK315581 AB527698	-118431	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	1478349	+	TSC_hg19_v1_chr15_+_48009541 AK290032	2011550	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	2012647	+	AK222463|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF042284|SQRDL|58472|sulfide quinone reductase-like (yeast)##NM_021199|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF151802|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK313111|SQRDL|58472|sulfide quinone reductase-like (yeast)##BC016836|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK128626|PLDN|26258|pallidin homolog (mouse)##AK057545|PLDN|26258|pallidin homolog (mouse)##BC004819|PLDN|26258|pallidin homolog (mouse)##AK315581|PLDN|26258|pallidin homolog (mouse)##AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	0.995019	CTCF.p2:-3:0.995
chr4	112775785	112775886	reg1019331.p1	6.827	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1212557	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1217666	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-1231560	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	290779	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	377249	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	431166	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.500133	CTCF.p2:15:0.500
chr5	100926219	100926379	reg1020630.p1	6.827	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-687371	-	AF529367 TSC_hg19_v1_chr5_+_99871306	-1055029	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-1055226	+	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	705809	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	908334	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	1275231	+	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase	0.993982	CTCF.p2:6:0.994
chr5	35921137	35921252	reg1018196.p2	6.827	+	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	-64161	+	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	-303185	+	NM_000949	-690372	-	NM_001042625 BC017586 NM_144647	17614	-	CU686633 BC068446 AK308046 AK290809 AK057066 AK303770 AK315851 AK296136 NM_152404	70244	-	BC035012 NM_001171873	79933	-	BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##NM_000949|PRLR|5618|prolactin receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like##BC068446|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK308046|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK290809|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK057066|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK303770|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK315851|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK296136|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_152404|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	0.026426	
chrX	30522556	30522691	reg1019991.p2	6.827	+	HQ692832 AB464646 BC011564 NM_000475	-195137	-	NM_177404 BC013772	-257327	+	AK314977 NM_002363 NM_177415 X82539	-260776	+	TSC_hg19_v1_chrX_-_30595884 AK021639 BC020611 NM_025159	73334	-	TSC_hg19_v1_chrX_+_30671493 BC042421 BC071595 NM_000167 NM_001128127 NM_001205019 NM_203391	148871	+	TSC_hg19_v1_chrX_+_30671539 AK313215	148919	+	HQ692832|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##BC011564|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_000475|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_177404|MAGEB1|4112|melanoma antigen family B, 1##BC013772|MAGEB1|4112|melanoma antigen family B, 1##AK314977|MAGEB1|4112|melanoma antigen family B, 1##NM_002363|MAGEB1|4112|melanoma antigen family B, 1##NM_177415|MAGEB1|4112|melanoma antigen family B, 1##X82539|MAGEB1|4112|melanoma antigen family B, 1##AK021639|CXorf21|80231|chromosome X open reading frame 21##BC020611|CXorf21|80231|chromosome X open reading frame 21##NM_025159|CXorf21|80231|chromosome X open reading frame 21##BC042421|GK|2710|glycerol kinase##BC071595|GK|2710|glycerol kinase##NM_000167|GK|2710|glycerol kinase##NM_001128127|GK|2710|glycerol kinase##NM_001205019|GK|2710|glycerol kinase##NM_203391|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase	0.907175	CTCF.p2:13:0.907
chrX	56790281	56790409	reg1008883.p1	6.827	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-34654	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-200294	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-531435	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	231626	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	357583	-	BC071694 NM_019003	373712	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.740395	CTCF.p2:25:0.740
chr7	33147408	33147535	reg1015774.p2	6.826	+	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-45149	-	BC015856 NM_001166118 NM_016489	-66952	-	TSC_hg19_v1_chr7_+_32997051 NM_007270 AK075331 AK128597 AK300328 AK293954 AK294266 BC101723 BC112053 AF089745	-150319	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	1506	-	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	21610	+	AK289963 NM_133468 AK096150 BC060868	797671	+	AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##BC015856|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001166118|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_016489|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_007270|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK075331|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK128597|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK300328|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK293954|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK294266|FKBP9|11328|FK506 binding protein 9, 63 kDa##BC101723|FKBP9|11328|FK506 binding protein 9, 63 kDa##BC112053|FKBP9|11328|FK506 binding protein 9, 63 kDa##AF089745|FKBP9|11328|FK506 binding protein 9, 63 kDa##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator	0.994841	CTCF.p2:6:0.995
chrX	106137719	106137830	reg1020077.p2	6.826	+	TSC_hg19_v1_chrX_+_106045925 AK123957 NM_017752 NM_198881 BC122564 BX648230 AB449890 AB449891	-91793	+	TSC_hg19_v1_chrX_+_105969932 AK074264 NM_194463 BC063404 AF394689 CU687692	-167766	+	BC036901 NM_024539 AK126553	-200699	+	AF177340 NM_001171092	5619	+	BC007652 BC101998 BC105691 BC105692 BC110436 BC127250 NM_001171706 NM_138382	8779	-	AK312515 NM_001171095	23815	+	AK123957|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_017752|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_198881|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BC122564|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BX648230|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449890|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449891|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AK074264|RNF128|79589|ring finger protein 128##NM_194463|RNF128|79589|ring finger protein 128##BC063404|RNF128|79589|ring finger protein 128##AF394689|RNF128|79589|ring finger protein 128##BC036901|RNF128|79589|ring finger protein 128##NM_024539|RNF128|79589|ring finger protein 128##AK126553|RNF128|79589|ring finger protein 128##AF177340|CLDN2|9075|claudin 2##NM_001171092|CLDN2|9075|claudin 2##BC007652|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC101998|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC105691|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC105692|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC110436|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC127250|RIPPLY1|92129|ripply1 homolog (zebrafish)##NM_001171706|RIPPLY1|92129|ripply1 homolog (zebrafish)##NM_138382|RIPPLY1|92129|ripply1 homolog (zebrafish)##AK312515|CLDN2|9075|claudin 2##NM_001171095|CLDN2|9075|claudin 2	0.908004	CTCF.p2:-11:0.908
chr3	114081773	114081891	reg1018817.p2	6.825	+	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	-68979	+	NM_007136 X65233	-125408	-	AY228457 AY228458 NM_000796 NM_033663 AY228454	-183916	-	AF139460 NM_001164342	20656	-	BC029041 NM_001164347	261220	-	AK315307 NM_001164346 TSC_hg19_v1_chr3_-_114343793	261962	-	EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##AY228457|DRD3|1814|dopamine receptor D3##AY228458|DRD3|1814|dopamine receptor D3##NM_000796|DRD3|1814|dopamine receptor D3##NM_033663|DRD3|1814|dopamine receptor D3##AY228454|DRD3|1814|dopamine receptor D3##AF139460|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164342|ZBTB20|26137|zinc finger and BTB domain containing 20##BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20	0.0	
chrX	20545707	20545857	reg1020356.p1	6.825	+	TSC_hg19_v1_chrX_-_20285141 AK294373	-260618	-	TSC_hg19_v1_chrX_-_20285001 AB208933	-260825	-	AB102662 L07599 AB384785 BC096301 BC096302 BC096303 NM_004586 U08316 AK313932	-261052	-	TSC_hg19_v1_chrX_+_21392535 NM_001168647 NM_001168648 NM_001168649 NM_014927 AB020709 AK294728	846726	+	BC109031 AK092279 AX747450 NM_153270	1130649	-	BC005948 AF129505 AJ250584 NM_014332 AK312134	1230435	-	AK294373|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AB208933|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AB102662|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##L07599|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096301|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096302|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096303|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##NM_004586|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##U08316|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AK313932|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##NM_001168647|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168648|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168649|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_014927|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AB020709|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AK294728|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##BC109031|KLHL34|257240|kelch-like 34 (Drosophila)##AK092279|KLHL34|257240|kelch-like 34 (Drosophila)##NM_153270|KLHL34|257240|kelch-like 34 (Drosophila)##BC005948|SMPX|23676|small muscle protein, X-linked##AF129505|SMPX|23676|small muscle protein, X-linked##AJ250584|SMPX|23676|small muscle protein, X-linked##NM_014332|SMPX|23676|small muscle protein, X-linked##AK312134|SMPX|23676|small muscle protein, X-linked	0.98734	CTCF.p2:-15:0.987
chr11	117492079	117492218	reg1020346.p2	6.824	+	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-293317	+	TSC_hg19_v1_chr11_+_117198594 BX648682 NM_014956 BC054015	-293564	+	TSC_hg19_v1_chr11_-_117186973 AF324837 AB032975 AF201468 AF190725 BC036084 AK075049 BC065492 NM_012104 NM_138971 NM_138972 NM_138973	-305168	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	175705	-	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	175811	-	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	203286	-	AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##BX648682|CEP164|22897|centrosomal protein 164kDa##NM_014956|CEP164|22897|centrosomal protein 164kDa##BC054015|CEP164|22897|centrosomal protein 164kDa##AF324837|BACE1|23621|beta-site APP-cleaving enzyme 1##AB032975|BACE1|23621|beta-site APP-cleaving enzyme 1##AF201468|BACE1|23621|beta-site APP-cleaving enzyme 1##AF190725|BACE1|23621|beta-site APP-cleaving enzyme 1##BC036084|BACE1|23621|beta-site APP-cleaving enzyme 1##AK075049|BACE1|23621|beta-site APP-cleaving enzyme 1##BC065492|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_012104|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138971|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138972|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138973|BACE1|23621|beta-site APP-cleaving enzyme 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2	0.0	
chr2	74426256	74426366	reg1020842.p1	6.824	+	NM_006636 TSC_hg19_v1_chr2_+_74425741 AK300035 AK130664 AK222826 AK223041 AK302245 AK313138 BC015062 BC001548 BC017054 AB529041 X16396 DQ894679	-574	+	AK057260 TSC_hg19_v1_chr2_-_74425749	-596	-	AJ577474 CU678456 TSC_hg19_v1_chr2_-_74406014 AB016839 AK023321 AK001650 BC003398 NM_018221 AK021657	-20404	-	AF243499 AF293338 NM_021196	115839	-	NM_133478	144222	-	AK315014 BC071583 TSC_hg19_v1_chr2_-_74601817 NM_001135041 NM_023019	175446	-	NM_006636|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK300035|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK130664|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK222826|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK223041|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK302245|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK313138|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC015062|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC001548|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC017054|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##X16396|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##DQ894679|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AJ577474|MOB1A|55233|MOB kinase activator 1A##AB016839|MOB1A|55233|MOB kinase activator 1A##AK023321|MOB1A|55233|MOB kinase activator 1A##AK001650|MOB1A|55233|MOB kinase activator 1A##BC003398|MOB1A|55233|MOB kinase activator 1A##NM_018221|MOB1A|55233|MOB kinase activator 1A##AK021657|MOB1A|55233|MOB kinase activator 1A##AF243499|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##AF293338|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##NM_021196|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##NM_133478|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##AK315014|DCTN1|1639|dynactin 1##BC071583|DCTN1|1639|dynactin 1##NM_001135041|DCTN1|1639|dynactin 1##NM_023019|DCTN1|1639|dynactin 1	0.01694	
chr11	66156612	66156729	reg1021042.p2	6.823	+	AF029358 BC093634 BC143335 X86681 TSC_hg19_v1_chr11_-_66139222 AF034102 AF401235 NM_001532	-17493	-	CU692428 DQ892706 DQ895957 AK075354 AK098779 AK225182 TSC_hg19_v1_chr11_-_66115101 AK294604 BC021965 AK293715 AF029893 AK098389 NM_006876	-41579	-	BC009834 TSC_hg19_v1_chr11_-_66112576 AF159141 AK310991 NM_001024957 NM_015399	-44110	-	AK096253 NM_178864 TSC_hg19_v1_chr11_+_66188505 AB049469 BC105001 BC105003 BC143630 EU446888	31891	+	TSC_hg19_v1_chr11_-_66206308 BC108277 AB049638 AK290084 AK223112 BC005002 AF151871 NM_016050 NM_170738 NM_170739	49616	-	AK094060 AX748433 NM_001243135	77127	+	AF029358|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC093634|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC143335|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##X86681|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF034102|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF401235|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##NM_001532|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##BC009834|BRMS1|25855|breast cancer metastasis suppressor 1##AF159141|BRMS1|25855|breast cancer metastasis suppressor 1##AK310991|BRMS1|25855|breast cancer metastasis suppressor 1##NM_001024957|BRMS1|25855|breast cancer metastasis suppressor 1##NM_015399|BRMS1|25855|breast cancer metastasis suppressor 1##AK096253|NPAS4|266743|neuronal PAS domain protein 4##NM_178864|NPAS4|266743|neuronal PAS domain protein 4##AB049469|NPAS4|266743|neuronal PAS domain protein 4##BC105001|NPAS4|266743|neuronal PAS domain protein 4##BC105003|NPAS4|266743|neuronal PAS domain protein 4##BC143630|NPAS4|266743|neuronal PAS domain protein 4##EU446888|NPAS4|266743|neuronal PAS domain protein 4##BC108277|MRPL11|65003|mitochondrial ribosomal protein L11##AB049638|MRPL11|65003|mitochondrial ribosomal protein L11##AK290084|MRPL11|65003|mitochondrial ribosomal protein L11##AK223112|MRPL11|65003|mitochondrial ribosomal protein L11##BC005002|MRPL11|65003|mitochondrial ribosomal protein L11##AF151871|MRPL11|65003|mitochondrial ribosomal protein L11##NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11##NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11##NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11##AK094060|PELI3|246330|pellino homolog 3 (Drosophila)##NM_001243135|PELI3|246330|pellino homolog 3 (Drosophila)	0.350048	CTCF.p2:-1:0.350
chr13	53239621	53239735	reg1020151.p1	6.823	+	NM_001130912 NM_006704 TSC_hg19_v1_chr13_+_53227044 AJ344097 AK292128 AY321358 AK302363 AY271314 BC000911 AK291402 AB528309 AF132856 BT009798 DQ890945 DQ894108	-12736	+	TSC_hg19_v1_chr13_+_53216565 BC108266	-23113	+	TSC_hg19_v1_chr13_+_53191659 NM_001011724 NM_001011725 BC007108 AK123159 BC082242	-48041	+	AB006000 CR541910 TSC_hg19_v1_chr13_-_53313891	74186	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	74284	-	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	183097	-	NM_001130912|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##NM_006704|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AJ344097|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK292128|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY321358|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK302363|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY271314|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC000911|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK291402|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF132856|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BT009798|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ890945|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ894108|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001011724|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001011725|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##AK123159|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##BC082242|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##AB006000|LECT1|11061|leukocyte cell derived chemotaxin 1##CR541910|LECT1|11061|leukocyte cell derived chemotaxin 1##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8	0.407569	CTCF.p2:-2:0.408
chr14	59797279	59797440	reg1020316.p1	6.823	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	-141955	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-692613	+	AK302579 NM_001244193 AK310356 AK302718	-890933	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	134563	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	134697	-	TSC_hg19_v1_chr14_-_59951106 AK058165 NM_144581 BC012131	153721	-	BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135##AK058165|C14orf149|112849|chromosome 14 open reading frame 149##NM_144581|C14orf149|112849|chromosome 14 open reading frame 149##BC012131|C14orf149|112849|chromosome 14 open reading frame 149	0.413676	CTCF.p2:7:0.414
chr8	101450283	101450463	reg1019109.p1	6.823	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-128088	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-128192	-	AB271913 AB271914 AB029316 NM_015435	-134902	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	121567	-	AK093906 AX748361 NM_152628	211519	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	283433	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr9	117443914	117444044	reg1010213.p1	6.823	+	TSC_hg19_v1_chr9_+_117373735 NM_153045 AK289383 BC107133 BC107134 BX649023	-70210	+	TSC_hg19_v1_chr9_+_117350103 CU678965 CR456971 CR542237	-93872	+	NM_004888 TSC_hg19_v1_chr9_+_117350048 BC003564 AF038954 BC008452	-93941	+	NM_001199233	389	-	AY434464 NM_001204344	110830	-	AB590753 AK291642 BC074940 BC074941 BC069435 AK313721 BC104462 BC104463 NM_005118 AF520785	124372	-	NM_153045|C9orf91|203197|chromosome 9 open reading frame 91##AK289383|C9orf91|203197|chromosome 9 open reading frame 91##BC107133|C9orf91|203197|chromosome 9 open reading frame 91##BC107134|C9orf91|203197|chromosome 9 open reading frame 91##BX649023|C9orf91|203197|chromosome 9 open reading frame 91##CR456971|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##CR542237|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##NM_001199233|LOC100505478|100505478|uncharacterized LOC100505478##AY434464|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001204344|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK291642|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074940|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074941|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC069435|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313721|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104462|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104463|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_005118|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AF520785|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15	0.733078	CTCF.p2:-5:0.733
chr13	70672974	70673075	reg1020904.p1	6.822	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-2868520	-	AK289924 NM_022843	-8683370	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-8683771	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	9517	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	1767235	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	1767739	-	BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)	0.705285	CTCF.p2:-7:0.705
chr8	28945111	28945226	reg1018584.p1	6.822	+	TSC_hg19_v1_chr8_+_28748135 AY522342 DQ269478 BC069242 NM_024567	-197041	+	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	-197251	+	NM_001145159 NM_018250	-197471	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	175446	-	AL137704 NM_057158	261153	-	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	262902	-	AY522342|HMBOX1|79618|homeobox containing 1##DQ269478|HMBOX1|79618|homeobox containing 1##BC069242|HMBOX1|79618|homeobox containing 1##NM_024567|HMBOX1|79618|homeobox containing 1##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4	0.013457	
chr9	15417026	15417144	reg1019651.p2	6.822	+	TSC_hg19_v1_chr9_-_15307325 AK298998 BC142985 AK310482 NM_001168339 NM_001168340 NM_001168341 NM_152574	-109741	-	TSC_hg19_v1_chr9_-_15307215 BC070139 AK301185 AK298581 AK091187 AX746836	-109885	-	AK301427 NM_001168342	-166930	-	TSC_hg19_v1_chr9_+_15422741 BC036031 NM_001039697	5623	+	TSC_hg19_v1_chr9_+_15422873 BC121011 BC121012 U66413 BC108743 U71300 AK293310	5783	+	TSC_hg19_v1_chr9_+_15422877 AB527501 EU446705 BC014985	5827	+	AK298998|TTC39B|158219|tetratricopeptide repeat domain 39B##BC142985|TTC39B|158219|tetratricopeptide repeat domain 39B##AK310482|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168339|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168340|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168341|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_152574|TTC39B|158219|tetratricopeptide repeat domain 39B##BC070139|TTC39B|158219|tetratricopeptide repeat domain 39B##AK301185|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298581|TTC39B|158219|tetratricopeptide repeat domain 39B##AK091187|TTC39B|158219|tetratricopeptide repeat domain 39B##AK301427|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168342|TTC39B|158219|tetratricopeptide repeat domain 39B##BC036031|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##NM_001039697|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC121011|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC121012|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##U66413|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC108743|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##U71300|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##AK293310|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	0.341489	CTCF.p2:21:0.341
chrX	139655010	139655126	reg1021764.p1	6.822	+	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	-67816	-	BC137148 BC137149 NM_001013403	-607392	-	BC132728 BC132730 AJ580093 AJ580094 NM_001010986 NM_173694	-740653	-	TSC_hg19_v1_chrX_+_139791923 AK054978	136859	+	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	211584	-	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	429738	+	NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##BC132728|ATP11C|286410|ATPase, class VI, type 11C##BC132730|ATP11C|286410|ATPase, class VI, type 11C##AJ580093|ATP11C|286410|ATPase, class VI, type 11C##AJ580094|ATP11C|286410|ATPase, class VI, type 11C##NM_001010986|ATP11C|286410|ATPase, class VI, type 11C##NM_173694|ATP11C|286410|ATPase, class VI, type 11C##AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1	0.947294	CTCF.p2:-11:0.947
chr14	24196895	24196995	reg1020261.p1	6.821	+	AK222857 NM_005794 NM_182908 AK309945 BC002786 U31875	-91367	+	BC055429 TSC_hg19_v1_chr14_-_24048004 AB058734 NM_001146028 NM_032452	-148945	-	TSC_hg19_v1_chr14_-_24047779 AK091572 AX747068	-149147	-	TSC_hg19_v1_chr14_-_24422882 BX247982	225931	-	TSC_hg19_v1_chr14_+_24422978 AY616182 DQ344810 NM_021004 AY358638 AF064256 AF044127 AK001870 AK308436 DQ325464 AK314448 AY071856 BC003019 AK301201 DQ338571	226082	+	BC062348 BC080582 TSC_hg19_v1_chr14_-_24423358 BX647964	226406	-	AK222857|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##NM_005794|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##NM_182908|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##AK309945|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##BC002786|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##U31875|DHRS2|10202|dehydrogenase/reductase (SDR family) member 2##BC055429|JPH4|84502|junctophilin 4##AB058734|JPH4|84502|junctophilin 4##NM_001146028|JPH4|84502|junctophilin 4##NM_032452|JPH4|84502|junctophilin 4##AK091572|JPH4|84502|junctophilin 4##BX247982|C14orf167|55449|chromosome 14 open reading frame 167##AY616182|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ344810|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##NM_021004|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY358638|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF064256|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF044127|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK001870|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK308436|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ325464|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK314448|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY071856|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##BC003019|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ338571|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##BC062348|C14orf167|55449|chromosome 14 open reading frame 167##BC080582|C14orf167|55449|chromosome 14 open reading frame 167##BX647964|C14orf167|55449|chromosome 14 open reading frame 167	0.997445	CTCF.p2:-11:0.997
chr15	95835210	95835351	reg1019780.p1	6.821	+	NM_001159644 BC025708 BC111024 AK002037	-935971	+	NM_001159643 NM_018349 AY656717 BC131527	-993819	+	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	-1060422	+	TSC_hg19_v1_chr15_-_95870310 BC040875	35039	-	BC106083 NM_001145155 FM208183	1033881	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	1038697	+	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##BC040875|LOC400456|400456|uncharacterized LOC400456##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.998865	CTCF.p2:23:0.999
chr2	158310451	158310576	reg1020411.p2	6.821	+	L06633 AB528875 CU690346 AF068836 BC036449 TSC_hg19_v1_chr2_-_158300602 AK312753 NM_004288	-9949	-	NM_001009959 AK296477	-126357	-	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	-128229	-	TSC_hg19_v1_chr2_-_158454049 AF525679 NM_001111031	143562	-	AB590288 CU692676 DQ895570 EU176205 AF525680 AF525681 AY127050 TSC_hg19_v1_chr2_-_158485239	174685	-	BC022530 NM_001111032 NM_001111033 NM_145259 TSC_hg19_v1_chr2_-_158485400	174884	-	L06633|CYTIP|9595|cytohesin 1 interacting protein##AF068836|CYTIP|9595|cytohesin 1 interacting protein##BC036449|CYTIP|9595|cytohesin 1 interacting protein##AK312753|CYTIP|9595|cytohesin 1 interacting protein##NM_004288|CYTIP|9595|cytohesin 1 interacting protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##AF525679|ACVR1C|130399|activin A receptor, type IC##NM_001111031|ACVR1C|130399|activin A receptor, type IC##DQ895570|ACVR1C|130399|activin A receptor, type IC##EU176205|ACVR1C|130399|activin A receptor, type IC##AF525680|ACVR1C|130399|activin A receptor, type IC##AF525681|ACVR1C|130399|activin A receptor, type IC##AY127050|ACVR1C|130399|activin A receptor, type IC##BC022530|ACVR1C|130399|activin A receptor, type IC##NM_001111032|ACVR1C|130399|activin A receptor, type IC##NM_001111033|ACVR1C|130399|activin A receptor, type IC##NM_145259|ACVR1C|130399|activin A receptor, type IC	0.141905	
chr22	36235001	36235121	reg1021479.p1	6.821	+	AB528803 AY014878 NM_030642	-121144	+	TSC_hg19_v1_chr22_+_36044482 BC038950 AY358210	-190561	+	TSC_hg19_v1_chr22_+_36044432 AY014879 NM_030641 BC047864 AX775805 AL834420 AK095881	-190625	+	AB463238 AB649123 AY960684 CU013159 CU013447 CU692956 DQ891720 DQ894897 DQ894898 TSC_hg19_v1_chr22_-_36236318	1230	-	CR456559 TSC_hg19_v1_chr22_-_36236341	1279	-	TSC_hg19_v1_chr22_-_36236476 AF229058 AL009266 AK314632 BC013115 BC025281 AK291460 NM_001031695 NM_001082576 NM_001082577 NM_014309	1464	-	AY014878|APOL5|80831|apolipoprotein L, 5##NM_030642|APOL5|80831|apolipoprotein L, 5##BC038950|APOL6|80830|apolipoprotein L, 6##AY358210|APOL6|80830|apolipoprotein L, 6##AY014879|APOL6|80830|apolipoprotein L, 6##NM_030641|APOL6|80830|apolipoprotein L, 6##BC047864|APOL6|80830|apolipoprotein L, 6##AL834420|APOL6|80830|apolipoprotein L, 6##AK095881|APOL6|80830|apolipoprotein L, 6##AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	0.704841	CTCF.p2:-2:0.705
chr10	84137590	84137711	reg1019849.p1	6.820	+	DQ857894 NM_001165973	-500208	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-502568	+	AK123978 NM_001145719	-1837076	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	1761607	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	1794142	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	1795909	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.999751	CTCF.p2:4:1.000
chr12	123850348	123850480	reg1018482.p2	6.820	+	AK122703 TSC_hg19_v1_chr12_-_123849766	-649	-	BC030544 TSC_hg19_v1_chr12_-_123849386 AK001695 AK307488	-1021	-	AY364255 AB014772 BC129949 BC133704 NM_001167856 NM_018183	-15429	-	TSC_hg19_v1_chr12_+_123868678 AK292645 NM_020382	18241	+	TSC_hg19_v1_chr12_+_123868724 AY102937 AB464199	18309	+	AY064546 TSC_hg19_v1_chr12_+_123873657	23215	+	AK122703|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##BC030544|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AK001695|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AK307488|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AY364255|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AB014772|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##BC129949|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##BC133704|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##NM_001167856|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##NM_018183|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AK292645|SETD8|387893|SET domain containing (lysine methyltransferase) 8##NM_020382|SETD8|387893|SET domain containing (lysine methyltransferase) 8##AY102937|SETD8|387893|SET domain containing (lysine methyltransferase) 8##AY064546|SETD8|387893|SET domain containing (lysine methyltransferase) 8	0.982272	CTCF.p2:3:0.982
chr7	30102359	30102457	reg1010394.p3	6.820	+	TSC_hg19_v1_chr7_+_30068250 BC002838 AF308300 AF380162 DQ893498 DQ896458 CU678236	-34117	+	TSC_hg19_v1_chr7_+_30068010 NM_001197026 NM_001197027 NM_032639 AK294857 BC053990 AK023180	-34407	+	CU675039 DQ892525 DQ895737 TSC_hg19_v1_chr7_-_30066286 AK000738 NM_017946 AK309552 AY358643 BC005206	-36187	-	TSC_hg19_v1_chr7_+_30174621 NM_152793 AK096533 AL834391 AK098769 AB528783 AK294982	72174	+	AF513707 NM_147128	221514	+	TSC_hg19_v1_chr7_+_30324515 AF527533	222141	+	BC002838|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF308300|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF380162|PLEKHA8P1|51054|pleckstrin homology domain containing, family A member 8 pseudogene 1##DQ893498|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##DQ896458|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197026|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197027|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_032639|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK294857|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##BC053990|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK023180|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##DQ892525|FKBP14|55033|FK506 binding protein 14, 22 kDa##DQ895737|FKBP14|55033|FK506 binding protein 14, 22 kDa##AK000738|FKBP14|55033|FK506 binding protein 14, 22 kDa##NM_017946|FKBP14|55033|FK506 binding protein 14, 22 kDa##AK309552|FKBP14|55033|FK506 binding protein 14, 22 kDa##AY358643|FKBP14|55033|FK506 binding protein 14, 22 kDa##BC005206|FKBP14|55033|FK506 binding protein 14, 22 kDa##NM_152793|C7orf41|222166|chromosome 7 open reading frame 41##AK096533|C7orf41|222166|chromosome 7 open reading frame 41##AL834391|C7orf41|222166|chromosome 7 open reading frame 41##AK098769|C7orf41|222166|chromosome 7 open reading frame 41##AK294982|C7orf41|222166|chromosome 7 open reading frame 41##AF513707|ZNRF2|223082|zinc and ring finger 2##NM_147128|ZNRF2|223082|zinc and ring finger 2##AF527533|ZNRF2|223082|zinc and ring finger 2	0.036978	
chr8	117778491	117778633	reg1021112.p1	6.820	+	AK222520 TSC_hg19_v1_chr8_-_117768063 AK296162 NM_003756	-10491	-	TSC_hg19_v1_chr8_-_117768041 BC000386 BT019594 CR456906 CU674186 AK222620 U54559 BC090880	-10525	-	TSC_hg19_v1_chr8_-_116681365 AF183810	-1097227	-	BC005955 BC022441 NM_032334 TSC_hg19_v1_chr8_+_117778752	189	+	TSC_hg19_v1_chr8_+_117778793 AK055279 AK315770	232	+	AK289505 BC050381 TSC_hg19_v1_chr8_-_117887011 D38551	108385	-	AK222520|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK296162|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##NM_003756|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC000386|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BT019594|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##CR456906|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222620|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##U54559|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC090880|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I##BC005955|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC022441|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##NM_032334|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##AK055279|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##AK315770|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##AK289505|RAD21|5885|RAD21 homolog (S. pombe)##BC050381|RAD21|5885|RAD21 homolog (S. pombe)##D38551|RAD21|5885|RAD21 homolog (S. pombe)	0.0	
chr12	84217562	84217696	reg1017492.p1	6.819	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	-1136368	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	-1136712	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	-1136929	+	AK291207 AK022853 TSC_hg19_v1_chr12_-_85306547	1088914	-	TSC_hg19_v1_chr12_-_85306575 BC022253 BC070040	1088943	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	1088963	-	AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK291207|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK022853|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC022253|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC070040|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15	0.99918	CTCF.p2:40:0.999
chr16	14787193	14787340	reg1022814.p1	6.819	+	TSC_hg19_v1_chr16_+_14726837 BC003054 AK291114 AK297067	-60423	+	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	-60527	+	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	-63133	-	BC106731 BC106732 BC111804 NM_003561 U95301	1211	-	TSC_hg19_v1_chr16_+_14927651 NM_014287 BC065535	140377	+	TSC_hg19_v1_chr16_+_14927721 X57398	140494	+	BC003054|BFAR|51283|bifunctional apoptosis regulator##AK291114|BFAR|51283|bifunctional apoptosis regulator##AK297067|BFAR|51283|bifunctional apoptosis regulator##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##BC106731|PLA2G10|8399|phospholipase A2, group X##BC106732|PLA2G10|8399|phospholipase A2, group X##BC111804|PLA2G10|8399|phospholipase A2, group X##NM_003561|PLA2G10|8399|phospholipase A2, group X##U95301|PLA2G10|8399|phospholipase A2, group X##NM_014287|NOMO1|23420|NODAL modulator 1##BC065535|NOMO1|23420|NODAL modulator 1##X57398|NOMO1|23420|NODAL modulator 1	0.0	
chr1	185639600	185639710	reg1020469.p2	6.818	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-353185	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-353336	-	TSC_hg19_v1_chr1_+_185126418 AK291443	-513259	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	63921	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	625752	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	704602	-	NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)	0.324608	CTCF.p2:13:0.325
chr13	76248670	76248809	reg1021660.p1	6.818	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-38269	+	AF330045 NM_005358	-54170	+	TSC_hg19_v1_chr13_+_76123890 AK313665 BC018125 NM_006002 M30496 CU676190 BT019359 CR456855	-124815	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	86101	+	BC013764 TSC_hg19_v1_chr13_-_77460431	1211661	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	1211868	-	AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##AK313665|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BC018125|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_006002|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##M30496|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BT019359|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##CR456855|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12	0.061864	
chr15	43775647	43775759	reg1021563.p2	6.818	+	TSC_hg19_v1_chr15_+_43663381 AJ249677 CU680398 DQ896017 EU176400	-112252	+	TSC_hg19_v1_chr15_+_43663298 AK027703 BC012801 NM_014444 BC009870	-112400	+	AF525399 BC109270 BC109271 AB527871 AK122788 NM_152455 BC043612	-113520	-	TSC_hg19_v1_chr15_-_43785355 AK292915 BC017846 AB210025 BX537418 AK295764 AK307405 NM_001141979 NM_001141980	9607	-	BC063119 TSC_hg19_v1_chr15_-_43785370	9683	-	BC112161 NM_005657 AF078776 TSC_hg19_v1_chr15_-_43802798	27033	-	AJ249677|TUBGCP4|27229|tubulin, gamma complex associated protein 4##DQ896017|TUBGCP4|27229|tubulin, gamma complex associated protein 4##EU176400|TUBGCP4|27229|tubulin, gamma complex associated protein 4##AK027703|TUBGCP4|27229|tubulin, gamma complex associated protein 4##BC012801|TUBGCP4|27229|tubulin, gamma complex associated protein 4##NM_014444|TUBGCP4|27229|tubulin, gamma complex associated protein 4##BC009870|TUBGCP4|27229|tubulin, gamma complex associated protein 4##AF525399|ZSCAN29|146050|zinc finger and SCAN domain containing 29##BC109270|ZSCAN29|146050|zinc finger and SCAN domain containing 29##BC109271|ZSCAN29|146050|zinc finger and SCAN domain containing 29##AK122788|ZSCAN29|146050|zinc finger and SCAN domain containing 29##NM_152455|ZSCAN29|146050|zinc finger and SCAN domain containing 29##BC043612|ZSCAN29|146050|zinc finger and SCAN domain containing 29##AK292915|TP53BP1|7158|tumor protein p53 binding protein 1##BC017846|TP53BP1|7158|tumor protein p53 binding protein 1##AB210025|TP53BP1|7158|tumor protein p53 binding protein 1##BX537418|TP53BP1|7158|tumor protein p53 binding protein 1##AK295764|TP53BP1|7158|tumor protein p53 binding protein 1##AK307405|TP53BP1|7158|tumor protein p53 binding protein 1##NM_001141979|TP53BP1|7158|tumor protein p53 binding protein 1##NM_001141980|TP53BP1|7158|tumor protein p53 binding protein 1##BC063119|TP53BP1|7158|tumor protein p53 binding protein 1##BC112161|TP53BP1|7158|tumor protein p53 binding protein 1##NM_005657|TP53BP1|7158|tumor protein p53 binding protein 1##AF078776|TP53BP1|7158|tumor protein p53 binding protein 1	0.621847	CTCF.p2:-9:0.606
chr16	53241770	53241914	reg1020833.p1	6.818	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	-76782	+	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	-108743	+	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	-152961	+	NM_001207030	163198	-	TSC_hg19_v1_chr16_+_53468350 NM_005611	226510	+	TSC_hg19_v1_chr16_+_53468362 BC034490	226521	+	DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_001207030|LOC643802|643802|u3 small nucleolar ribonucleoprotein protein MPP10-like##NM_005611|RBL2|5934|retinoblastoma-like 2 (p130)##BC034490|RBL2|5934|retinoblastoma-like 2 (p130)	0.99499	CTCF.p2:7:0.995
chr4	1550706	1550827	reg1021695.p1	6.818	+	AK126919 NM_175918	-165427	+	TSC_hg19_v1_chr4_+_1341031 BC110331 AB040963 NM_020894 BC140901	-209498	+	TSC_hg19_v1_chr4_+_1283693 AK296174 AK022515 AY236486 AK308901 AF084928 BC006470 AY189687 BT006957	-267060	+	BC070112 NM_001013622 BC042071 NM_001174070	135086	-	BT007433 CU677395 DQ892370 DQ895579 Z71188 NM_006527 U75679 BC014908 BC015703 AK315635 TSC_hg19_v1_chr4_-_1714047 AK300826 AK091735 AX747152 AK093314	163226	-	TSC_hg19_v1_chr4_-_1722813 AK303880	172110	-	AK126919|CRIPAK|285464|cysteine-rich PAK1 inhibitor##NM_175918|CRIPAK|285464|cysteine-rich PAK1 inhibitor##BC110331|KIAA1530|57654|KIAA1530##AB040963|KIAA1530|57654|KIAA1530##NM_020894|KIAA1530|57654|KIAA1530##BC140901|KIAA1530|57654|KIAA1530##AK296174|MAEA|10296|macrophage erythroblast attacher##AK022515|MAEA|10296|macrophage erythroblast attacher##AY236486|MAEA|10296|macrophage erythroblast attacher##AK308901|MAEA|10296|macrophage erythroblast attacher##AF084928|MAEA|10296|macrophage erythroblast attacher##BC006470|MAEA|10296|macrophage erythroblast attacher##AY189687|MAEA|10296|macrophage erythroblast attacher##BT006957|MAEA|10296|macrophage erythroblast attacher##BC070112|FAM53A|152877|family with sequence similarity 53, member A##NM_001013622|FAM53A|152877|family with sequence similarity 53, member A##BC042071|FAM53A|152877|family with sequence similarity 53, member A##NM_001174070|FAM53A|152877|family with sequence similarity 53, member A##BT007433|SLBP|7884|stem-loop binding protein##DQ892370|SLBP|7884|stem-loop binding protein##DQ895579|SLBP|7884|stem-loop binding protein##Z71188|SLBP|7884|stem-loop binding protein##NM_006527|SLBP|7884|stem-loop binding protein##U75679|SLBP|7884|stem-loop binding protein##BC014908|SLBP|7884|stem-loop binding protein##BC015703|SLBP|7884|stem-loop binding protein##AK315635|SLBP|7884|stem-loop binding protein##AK300826|SLBP|7884|stem-loop binding protein##AK091735|SLBP|7884|stem-loop binding protein##AK093314|SLBP|7884|stem-loop binding protein##AK303880|TMEM129|92305|transmembrane protein 129	0.987468	CTCF.p2:-10:0.987
chr5	158307621	158307750	reg1021476.p1	6.818	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1021595	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-1123305	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-1136945	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	218772	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	219057	-	AK304228 NM_001199382	326963	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.861029	CTCF.p2:-13:0.861
chr6	69348335	69348438	reg1018810.p1	6.818	+	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	-2985	+	AL833240 TSC_hg19_v1_chr6_-_69345026	-3414	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	-749358	-	TSC_hg19_v1_chr6_-_70506472 AB074281	1158091	-	TSC_hg19_v1_chr6_-_70506524 AK290069	1158142	-	AF113224 TSC_hg19_v1_chr6_-_70506799 BC010360 AK225537 AK002102 AK225187	1158401	-	NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##AB074281|LMBRD1|55788|LMBR1 domain containing 1##AK290069|LMBRD1|55788|LMBR1 domain containing 1##AF113224|LMBRD1|55788|LMBR1 domain containing 1##BC010360|LMBRD1|55788|LMBR1 domain containing 1##AK225537|LMBRD1|55788|LMBR1 domain containing 1##AK002102|LMBRD1|55788|LMBR1 domain containing 1##AK225187|LMBRD1|55788|LMBR1 domain containing 1	0.982365	CTCF.p2:-19:0.982
chr21	28221889	28221998	reg1018815.p1	6.817	+	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	-4231	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	-4472	-	AY061853 AF401639 AK223576 AK313231 BC036761 AL833200 NM_052954 AK054581 AK304124	-276509	-	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	117496	-	TSC_hg19_v1_chr21_-_30257688 AB590951 BC011554 AK314100 AK225515 AF139682 NM_013240 NM_182749	2035720	-	BC007525 AB384515 TSC_hg19_v1_chr21_-_30365185 AF161350 AB018257 BC150284 AB621822 BC029371 BC140790 AK001915 BC031633 NM_015565	2143250	-	AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AY061853|CYYR1|116159|cysteine/tyrosine-rich 1##AF401639|CYYR1|116159|cysteine/tyrosine-rich 1##AK223576|CYYR1|116159|cysteine/tyrosine-rich 1##AK313231|CYYR1|116159|cysteine/tyrosine-rich 1##BC036761|CYYR1|116159|cysteine/tyrosine-rich 1##AL833200|CYYR1|116159|cysteine/tyrosine-rich 1##NM_052954|CYYR1|116159|cysteine/tyrosine-rich 1##AK054581|CYYR1|116159|cysteine/tyrosine-rich 1##AK304124|CYYR1|116159|cysteine/tyrosine-rich 1##AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##BC007525|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF161350|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AB018257|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC150284|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC029371|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC140790|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AK001915|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC031633|LTN1|26046|listerin E3 ubiquitin protein ligase 1##NM_015565|LTN1|26046|listerin E3 ubiquitin protein ligase 1	0.624889	CTCF.p2:1:0.625
chr1	25290126	25290274	reg1022608.p1	6.816	+	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-33414	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-33461	-	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	-33775	-	BC013362 AK310945 NM_001031680 AF022726	1342	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	268787	-	BC065040 TSC_hg19_v1_chr1_-_25573922	283723	-	AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr15	65378782	65378897	reg1022676.p1	6.816	+	NM_001101362	-9686	+	BC053734 TSC_hg19_v1_chr15_-_65360332 NM_016563	-18497	-	CU691030 AK314914 AK296261 TSC_hg19_v1_chr15_-_65360286 AF233588	-18608	-	BC127916 NM_001163692	19798	-	BT007395 BC016992 TSC_hg19_v1_chr15_-_65412291	33394	-	TSC_hg19_v1_chr15_-_65426147 AK225816 AK303203 BC131704 AK096970 BC092464 NM_005707	47091	-	NM_001101362|KBTBD13|390594|kelch repeat and BTB (POZ) domain containing 13##BC053734|RASL12|51285|RAS-like, family 12##NM_016563|RASL12|51285|RAS-like, family 12##AK314914|RASL12|51285|RAS-like, family 12##AK296261|RASL12|51285|RAS-like, family 12##AF233588|RASL12|51285|RAS-like, family 12##BC127916|UBAP1L|390595|ubiquitin associated protein 1-like##NM_001163692|UBAP1L|390595|ubiquitin associated protein 1-like##BT007395|PDCD7|10081|programmed cell death 7##BC016992|PDCD7|10081|programmed cell death 7##AK225816|PDCD7|10081|programmed cell death 7##AK303203|PDCD7|10081|programmed cell death 7##BC131704|PDCD7|10081|programmed cell death 7##AK096970|PDCD7|10081|programmed cell death 7##BC092464|PDCD7|10081|programmed cell death 7##NM_005707|PDCD7|10081|programmed cell death 7	0.504006	CTCF.p2:1:0.504
chr21	47035337	47035518	reg1017811.p1	6.816	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-73095	-	AK303168 NM_001205207	-80893	-	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	-160009	+	TSC_hg19_v1_chr21_+_47063638 AK310131	28202	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	234461	+	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	366258	+	U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1##AK310131|PCBP3|54039|poly(rC) binding protein 3##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1	0.196614	
chr3	134077466	134077583	reg1021387.p2	6.816	+	TSC_hg19_v1_chr3_-_133969650 NM_001005861 NM_002958 X69970 X96588	-107898	-	TSC_hg19_v1_chr3_-_133969397 AB527382	-108060	-	BC051347 TSC_hg19_v1_chr3_-_133748836 NM_005630	-328651	-	TSC_hg19_v1_chr3_-_134093290 AK223598 AK001343 AB023206 AK291616 NM_016201	15841	-	AK290761 TSC_hg19_v1_chr3_-_134204548	127006	-	TSC_hg19_v1_chr3_+_134204601 NM_001042383 NM_001042384 BC014050 AK023738	127070	+	NM_001005861|RYK|6259|RYK receptor-like tyrosine kinase##NM_002958|RYK|6259|RYK receptor-like tyrosine kinase##X69970|RYK|6259|RYK receptor-like tyrosine kinase##X96588|RYK|6259|RYK receptor-like tyrosine kinase##BC051347|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##NM_005630|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK223598|AMOTL2|51421|angiomotin like 2##AK001343|AMOTL2|51421|angiomotin like 2##AB023206|AMOTL2|51421|angiomotin like 2##AK291616|AMOTL2|51421|angiomotin like 2##NM_016201|AMOTL2|51421|angiomotin like 2##AK290761|ANAPC13|25847|anaphase promoting complex subunit 13##NM_001042383|CEP63|80254|centrosomal protein 63kDa##NM_001042384|CEP63|80254|centrosomal protein 63kDa##BC014050|CEP63|80254|centrosomal protein 63kDa##AK023738|CEP63|80254|centrosomal protein 63kDa	0.740902	CTCF.p2:-5:0.708
chr6	56886027	56886147	reg1020568.p1	6.816	+	BC036119 TSC_hg19_v1_chr6_+_56819931 AK054724	-66081	+	TSC_hg19_v1_chr6_+_56819725 NM_152731	-66348	+	AK299898 TSC_hg19_v1_chr6_-_56716715	-169373	-	TSC_hg19_v1_chr6_+_56911328 BC041125 NM_020931	25259	+	TSC_hg19_v1_chr6_+_56911464 BC012011 BC029372 AK295519 AK290988 AB587556 CU691960	25400	+	TSC_hg19_v1_chr6_+_56954826 AY055204 NM_001031623 NM_015555	68727	+	BC036119|BEND6|221336|BEN domain containing 6##AK054724|BEND6|221336|BEN domain containing 6##NM_152731|BEND6|221336|BEN domain containing 6##AK299898|DST|667|dystonin##BC041125|KIAA1586|57691|KIAA1586##NM_020931|KIAA1586|57691|KIAA1586##BC012011|KIAA1586|57691|KIAA1586##BC029372|KIAA1586|57691|KIAA1586##AK295519|KIAA1586|57691|KIAA1586##AK290988|KIAA1586|57691|KIAA1586##AY055204|ZNF451|26036|zinc finger protein 451##NM_001031623|ZNF451|26036|zinc finger protein 451##NM_015555|ZNF451|26036|zinc finger protein 451	0.963477	CTCF.p2:5:0.963
chr6	913238	913324	reg1021218.p1	6.816	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-220191	-	AF508547 BC101697 BC101699 NM_148959	-256328	-	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-521517	+	BC053850 NM_033260	399393	+	NM_001452 U13220 AB463646	476844	+	BC134421 NM_001453	697399	+	AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1	0.658237	CTCF.p2:18:0.658
chr7	123916179	123916299	reg1018636.p1	6.816	+	TSC_hg19_v1_chr7_-_123673486 NM_001136002	-242735	-	AK292229 NM_001174045 NM_001174046 AY920280 AY920281	-350319	+	NM_001174044 NM_003117 NM_153189 AY920278 AY920279 S67798 BC026163	-350913	+	AF502281 CU691802 AB464545 AF017262 TSC_hg19_v1_chr7_-_124405121	488836	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	489557	-	BC130600 BC130604 NM_001024603	514563	-	NM_001136002|TMEM229A|730130|transmembrane protein 229A##AK292229|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174045|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174046|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920280|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920281|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174044|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_003117|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_153189|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920278|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920279|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##S67798|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##BC026163|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AF502281|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##AF017262|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872	0.158321	
chr8	56991772	56991903	reg1023005.p1	6.816	+	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	-4751	-	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-199317	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	-199442	+	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	34703	-	TSC_hg19_v1_chr8_-_57123833 U65002	131998	-	AK296933 AK313663 NM_001114634 NM_001114635 NM_002655 TSC_hg19_v1_chr8_-_57123860	132024	-	BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1##AK296933|PLAG1|5324|pleiomorphic adenoma gene 1##AK313663|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001114634|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001114635|PLAG1|5324|pleiomorphic adenoma gene 1##NM_002655|PLAG1|5324|pleiomorphic adenoma gene 1	0.192728	
chr13	60903877	60903974	reg1020957.p2	6.815	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-165824	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	-165944	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	-316605	-	BX537910 NM_001146071 NM_030794	66665	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	67554	+	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	1085328	-	NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20	0.0	
chr2	120934954	120935090	reg1019756.p2	6.815	+	TSC_hg19_v1_chr2_+_120770652 AK023019 BC054508 AK290895 BC032822 NM_001184938	-164289	+	TSC_hg19_v1_chr2_+_120770604 NM_001184937 NM_001184939 NM_020909	-164419	+	M68941 NM_002830 TSC_hg19_v1_chr2_+_120517497 AK314836 BC010674	-417622	+	TSC_hg19_v1_chr2_-_120980957 BC016849 AK289880 BC080607 AK024632	45915	-	TSC_hg19_v1_chr2_-_120980977 AF530474 NM_024121	45976	-	NM_002881 TSC_hg19_v1_chr2_+_121010418	75398	+	AK023019|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC054508|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK290895|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC032822|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184938|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184937|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184939|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_020909|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC016849|TMEM185B|79134|transmembrane protein 185B##BC080607|TMEM185B|79134|transmembrane protein 185B##AK024632|TMEM185B|79134|transmembrane protein 185B##AF530474|TMEM185B|79134|transmembrane protein 185B##NM_024121|TMEM185B|79134|transmembrane protein 185B##NM_002881|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)	0.025988	
chr2	231807174	231807321	reg1021062.p1	6.815	+	BC032694 NM_005683	-17307	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-77525	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-77569	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	53645	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	94990	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	114330	+	BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.390912	CTCF.p2:-5:0.391
chr2	65396545	65396633	reg1018909.p1	6.815	+	TSC_hg19_v1_chr2_-_65357263 NM_004161 NM_015543	-39248	-	TSC_hg19_v1_chr2_-_65357236 BC000905 BX571747 AL050268 AK303678 AK055927 AK315495	-39370	-	AF498929 BT019528 BT019529 CR533479 CR536488 AB464118 AB590355 AM392684 CU674450 DQ894084 EU831590 EU831675 TSC_hg19_v1_chr2_-_65357083 M28209	-39514	-	TSC_hg19_v1_chr2_-_65454728 AK055581	58147	-	NM_001005386 NM_005722 TSC_hg19_v1_chr2_+_65454944 AK295157 AK301634 BC014546 BX649080 AF006082 AK315205 AB462954 EU831978 EU832071	58346	+	TSC_hg19_v1_chr2_-_65593766 AK299079	197184	-	NM_004161|RAB1A|5861|RAB1A, member RAS oncogene family##NM_015543|RAB1A|5861|RAB1A, member RAS oncogene family##BC000905|RAB1A|5861|RAB1A, member RAS oncogene family##BX571747|RAB1A|5861|RAB1A, member RAS oncogene family##AL050268|RAB1A|5861|RAB1A, member RAS oncogene family##AK303678|RAB1A|5861|RAB1A, member RAS oncogene family##AK055927|RAB1A|5861|RAB1A, member RAS oncogene family##AK315495|RAB1A|5861|RAB1A, member RAS oncogene family##AF498929|RAB1A|5861|RAB1A, member RAS oncogene family##BT019528|RAB1A|5861|RAB1A, member RAS oncogene family##BT019529|RAB1A|5861|RAB1A, member RAS oncogene family##CR533479|RAB1A|5861|RAB1A, member RAS oncogene family##CR536488|RAB1A|5861|RAB1A, member RAS oncogene family##AM392684|RAB1A|5861|RAB1A, member RAS oncogene family##DQ894084|RAB1A|5861|RAB1A, member RAS oncogene family##EU831590|RAB1A|5861|RAB1A, member RAS oncogene family##EU831675|RAB1A|5861|RAB1A, member RAS oncogene family##M28209|RAB1A|5861|RAB1A, member RAS oncogene family##AK055581|LOC729324|729324|hCG1986447##NM_001005386|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##NM_005722|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK295157|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK301634|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BC014546|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BX649080|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AF006082|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK315205|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU831978|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU832071|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK299079|SPRED2|200734|sprouty-related, EVH1 domain containing 2	0.76173	CTCF.p2:32:0.762
chr4	108104454	108104579	reg1020821.p1	6.815	+	NM_014421 AF177395	-147064	-	NM_001195138	-815925	-	AK074305 NM_001163436	-866689	-	BC011392 AF016496 CR457028 CU690750 BC040940 TSC_hg19_v1_chr4_-_108641372 BC050627 AF033026 AK292774 AK297981 Y10387 BC032513 AF105227 NM_005443	536848	-	AK290344 NM_001136258 AF452717	641251	+	NM_001136257 NM_152621 BC028705 AK314049 BC041369	709908	+	NM_014421|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##AF177395|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like##AK074305|TBCK|93627|TBC1 domain containing kinase##NM_001163436|TBCK|93627|TBC1 domain containing kinase##BC011392|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF016496|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##CR457028|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC040940|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC050627|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF033026|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK292774|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK297981|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##Y10387|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC032513|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF105227|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##NM_005443|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK290344|SGMS2|166929|sphingomyelin synthase 2##NM_001136258|SGMS2|166929|sphingomyelin synthase 2##AF452717|SGMS2|166929|sphingomyelin synthase 2##NM_001136257|SGMS2|166929|sphingomyelin synthase 2##NM_152621|SGMS2|166929|sphingomyelin synthase 2##BC028705|SGMS2|166929|sphingomyelin synthase 2##AK314049|SGMS2|166929|sphingomyelin synthase 2##BC041369|SGMS2|166929|sphingomyelin synthase 2	0.9867	CTCF.p2:-3:0.987
chr5	36079393	36079535	reg1022620.p1	6.815	+	AY358416 BC103924 BC103925 TSC_hg19_v1_chr5_-_36066985 AK075383 AK300751 AK303154 NM_001168316 NM_174914	-12475	-	BC035012 NM_001171873	-78337	-	CU686633 BC068446 AK308046 AK290809 AK057066 AK303770 AK315851 AK296136 NM_152404	-88026	-	BC110506 BC110507 AK091295 AX746900 AK307575 TSC_hg19_v1_chr5_-_36151990 BX647340 AK300433 CR749399 NM_001007527	72539	-	TSC_hg19_v1_chr5_+_36152212 NM_001243120 NM_005983 NM_032637 AK295152 U33761 AK291255	72716	+	BC007441 TSC_hg19_v1_chr5_+_36152241 BC001441 AK296223 AY029177	72803	+	AY358416|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##BC103924|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##BC103925|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##AK075383|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##AK300751|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##AK303154|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##NM_001168316|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##NM_174914|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##BC068446|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK308046|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK290809|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK057066|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK303770|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK315851|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK296136|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_152404|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##BC110506|LMBRD2|92255|LMBR1 domain containing 2##BC110507|LMBRD2|92255|LMBR1 domain containing 2##AK091295|LMBRD2|92255|LMBR1 domain containing 2##AK307575|LMBRD2|92255|LMBR1 domain containing 2##BX647340|LMBRD2|92255|LMBR1 domain containing 2##AK300433|LMBRD2|92255|LMBR1 domain containing 2##CR749399|LMBRD2|92255|LMBR1 domain containing 2##NM_001007527|LMBRD2|92255|LMBR1 domain containing 2##NM_001243120|SKP2|6502|S-phase kinase-associated protein 2 (p45)##NM_005983|SKP2|6502|S-phase kinase-associated protein 2 (p45)##NM_032637|SKP2|6502|S-phase kinase-associated protein 2 (p45)##AK295152|SKP2|6502|S-phase kinase-associated protein 2 (p45)##U33761|SKP2|6502|S-phase kinase-associated protein 2 (p45)##AK291255|SKP2|6502|S-phase kinase-associated protein 2 (p45)##BC007441|SKP2|6502|S-phase kinase-associated protein 2 (p45)##BC001441|SKP2|6502|S-phase kinase-associated protein 2 (p45)##AK296223|SKP2|6502|S-phase kinase-associated protein 2 (p45)##AY029177|SKP2|6502|S-phase kinase-associated protein 2 (p45)	0.958013	CTCF.p2:-8:0.958
chr1	17899282	17899381	reg1019628.p2	6.814	+	TSC_hg19_v1_chr1_+_17866365 AB046846 NM_018125 AK311076	-32971	+	TSC_hg19_v1_chr1_+_17846826 AK129959	-52508	+	TSC_hg19_v1_chr1_-_17766260 NM_018715	-133060	-	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	7684	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	45534	+	AK057339 NM_030812 BC028909 U20582	182515	+	AB046846|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_018125|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK311076|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK129959|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_018715|RCC2|55920|regulator of chromosome condensation 2##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8	0.461298	CTCF.p2:-5:0.440
chr11	119244993	119245110	reg1023524.p1	6.813	+	TSC_hg19_v1_chr11_-_119234904 AK309582 AF440755 NM_171997	-10169	-	AF079564 AK301805 AK292255 TSC_hg19_v1_chr11_-_119234855	-10309	-	AJ862823 BC036675 AB055505 AK295203 AK055132 NM_015645 NM_031433	-27678	-	TSC_hg19_v1_chr11_-_119252321 BC002854 BC002955	7260	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	7348	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	48858	-	AF440755|USP2|9099|ubiquitin specific peptidase 2##NM_171997|USP2|9099|ubiquitin specific peptidase 2##AF079564|USP2|9099|ubiquitin specific peptidase 2##AK301805|USP2|9099|ubiquitin specific peptidase 2##AK292255|USP2|9099|ubiquitin specific peptidase 2##AJ862823|MFRP|83552|membrane frizzled-related protein##BC036675|MFRP|83552|membrane frizzled-related protein##AB055505|MFRP|83552|membrane frizzled-related protein##AK295203|MFRP|83552|membrane frizzled-related protein##AK055132|MFRP|83552|membrane frizzled-related protein##NM_015645|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##NM_031433|MFRP|83552|membrane frizzled-related protein##BC002854|USP2|9099|ubiquitin specific peptidase 2##BC002955|USP2|9099|ubiquitin specific peptidase 2##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen	0.282584	CTCF.p2:24:0.258
chr1	157847973	157848144	reg1018940.p1	6.813	+	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	-36496	-	CU689698 AF329488 BC021274 AK315748 AK096690 BC033690 AF459634 AY043464 NM_001159397 NM_001159398 NM_052938	-58173	-	CU686705 AK301113 AY043465 AF459633 AY358130 AK303549 BC069185 NM_030764	-101166	-	AY302131 NM_018240	115004	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	115330	+	BC027926 NM_001766	301678	+	DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like##AF329488|FCRL1|115350|Fc receptor-like 1##BC021274|FCRL1|115350|Fc receptor-like 1##AK315748|FCRL1|115350|Fc receptor-like 1##AK096690|FCRL1|115350|Fc receptor-like 1##BC033690|FCRL1|115350|Fc receptor-like 1##AF459634|FCRL1|115350|Fc receptor-like 1##AY043464|FCRL1|115350|Fc receptor-like 1##NM_001159397|FCRL1|115350|Fc receptor-like 1##NM_001159398|FCRL1|115350|Fc receptor-like 1##NM_052938|FCRL1|115350|Fc receptor-like 1##AK301113|FCRL2|79368|Fc receptor-like 2##AY043465|FCRL2|79368|Fc receptor-like 2##AF459633|FCRL2|79368|Fc receptor-like 2##AY358130|FCRL2|79368|Fc receptor-like 2##AK303549|FCRL2|79368|Fc receptor-like 2##BC069185|FCRL2|79368|Fc receptor-like 2##NM_030764|FCRL2|79368|Fc receptor-like 2##AY302131|KIRREL|55243|kin of IRRE like (Drosophila)##NM_018240|KIRREL|55243|kin of IRRE like (Drosophila)##BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule	0.967754	CTCF.p2:-16:0.968
chr17	46088807	46088913	reg1020683.p1	6.813	+	AF343090 TSC_hg19_v1_chr17_+_46048487 AF110322 AK225274 BC072435 AB062433 BC009957	-40366	+	TSC_hg19_v1_chr17_+_46048471 AF217982 AK023722	-40391	+	AK223387 NM_176096 TSC_hg19_v1_chr17_+_46048452	-40428	+	TSC_hg19_v1_chr17_-_46115160 AB590254 DQ893053 DQ896301 AB047849 BC015924 AB037938 NM_016429	26290	-	TSC_hg19_v1_chr17_+_46125712 NM_003204 BC010623 AK090459	36839	+	AL833530 TSC_hg19_v1_chr17_+_46125724	36864	+	AF343090|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF110322|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK225274|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC072435|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AB062433|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC009957|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF217982|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK023722|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK223387|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##NM_176096|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##DQ893053|COPZ2|51226|coatomer protein complex, subunit zeta 2##DQ896301|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB047849|COPZ2|51226|coatomer protein complex, subunit zeta 2##BC015924|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB037938|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_016429|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	0.543925	CTCF.p2:-13:0.544
chr4	165859210	165859341	reg1020686.p2	6.813	+	AK289711 NM_001166373	-554869	-	NM_012403	-740413	-	AB463878 AK000675 AK301408 NM_017923	-1324560	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	18827	+	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	18876	+	BC089393 NM_001012414	39542	-	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61	0.09051	
chrX	74258913	74259041	reg1020394.p1	6.813	+	AK307471 NM_001008537 AB095942 BC152557	-113678	-	NM_016120 NM_183353 TSC_hg19_v1_chrX_-_73834460	-424513	-	TSC_hg19_v1_chrX_-_73834444 AK001334	-424538	-	TSC_hg19_v1_chrX_-_74376076 AF078777 AK307414 AF133659 BT009918 CU675349 DQ890692 EU176476 BC006323 AF038950 BX537833 AK294657 AK001418 NM_004299	117126	-	NM_145052 TSC_hg19_v1_chrX_+_74493908 AY643714 AK309951 AK056354 BC015116 CR749336 AK293024	234981	+	TSC_hg19_v1_chrX_+_74494057 CU677217	235092	+	AK307471|KIAA2022|340533|KIAA2022##NM_001008537|KIAA2022|340533|KIAA2022##AB095942|KIAA2022|340533|KIAA2022##BC152557|KIAA2022|340533|KIAA2022##NM_016120|RLIM|51132|ring finger protein, LIM domain interacting##NM_183353|RLIM|51132|ring finger protein, LIM domain interacting##AK001334|RLIM|51132|ring finger protein, LIM domain interacting##AF078777|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK307414|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AF133659|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BT009918|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##DQ890692|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##EU176476|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BC006323|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AF038950|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BX537833|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK294657|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK001418|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##NM_004299|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##NM_145052|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AY643714|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK309951|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK056354|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##BC015116|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##CR749336|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK293024|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)	0.823201	CTCF.p2:-29:0.823
chr11	130241212	130241330	reg1020938.p2	6.812	+	TSC_hg19_v1_chr11_-_130184509 AK314701 BC030580 BC049375 BC071729 NM_014155	-56739	-	TSC_hg19_v1_chr11_+_130184331 AK091840 AX747213	-56899	+	TSC_hg19_v1_chr11_-_130184330 AF161548	-56940	-	BC113874 TSC_hg19_v1_chr11_-_130298419 BC089435	57091	-	TSC_hg19_v1_chr11_-_130298505 NM_007037	57249	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	77391	+	AK314701|ZBTB44|29068|zinc finger and BTB domain containing 44##BC030580|ZBTB44|29068|zinc finger and BTB domain containing 44##BC049375|ZBTB44|29068|zinc finger and BTB domain containing 44##BC071729|ZBTB44|29068|zinc finger and BTB domain containing 44##NM_014155|ZBTB44|29068|zinc finger and BTB domain containing 44##AK091840|FLJ34521|646383|uncharacterized LOC646383##AF161548|ZBTB44|29068|zinc finger and BTB domain containing 44##BC113874|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC089435|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##NM_007037|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15	0.050848	
chr19	56592225	56592292	reg1001348.p2	6.812	+	AB527195 AY054986 AY154460 NM_153447	-81168	+	NM_176811 AB527377 AY154463	-133026	+	AB527194 AY154468 NM_176810	-148570	-	TSC_hg19_v1_chr19_-_56632629 BC037737	40356	-	TSC_hg19_v1_chr19_-_56632646 BC012495 BC077728 NM_001002836	40388	-	TSC_hg19_v1_chr19_+_56652664 NM_001253792 NM_018337 AL834130 AK223408	60347	+	AY054986|NLRP5|126206|NLR family, pyrin domain containing 5##AY154460|NLRP5|126206|NLR family, pyrin domain containing 5##NM_153447|NLRP5|126206|NLR family, pyrin domain containing 5##NM_176811|NLRP8|126205|NLR family, pyrin domain containing 8##AY154463|NLRP8|126205|NLR family, pyrin domain containing 8##AY154468|NLRP13|126204|NLR family, pyrin domain containing 13##NM_176810|NLRP13|126204|NLR family, pyrin domain containing 13##BC037737|ZNF787|126208|zinc finger protein 787##BC012495|ZNF787|126208|zinc finger protein 787##BC077728|ZNF787|126208|zinc finger protein 787##NM_001002836|ZNF787|126208|zinc finger protein 787##NM_001253792|ZNF444|55311|zinc finger protein 444##NM_018337|ZNF444|55311|zinc finger protein 444##AL834130|ZNF444|55311|zinc finger protein 444##AK223408|ZNF444|55311|zinc finger protein 444	0.0	
chr7	55118129	55118264	reg1021452.p2	6.812	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-31250	+	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	-31451	+	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	-291275	-	AK095857 NM_018697	314944	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	315376	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	521844	-	AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor##AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	0.085619	
chr1	12335559	12335682	reg1019000.p1	6.811	+	TSC_hg19_v1_chr1_+_12290088 NM_015378 NM_018156 AJ608774 AJ608775 AL162331	-45513	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	-108509	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	-108559	+	TSC_hg19_v1_chr1_+_12403045 AK057675	67450	+	DQ426869 DQ893006 DQ896252 CU678154 AF061741 AK222593 BC002730 TSC_hg19_v1_chr1_-_12677700 AK310202 AY358093 AK309282 AK312961 BX648476 NM_004753	341963	-	NM_001013630	368945	+	NM_015378|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_018156|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608774|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608775|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AL162331|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AK057675|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_001013630|AADACL4|343066|arylacetamide deacetylase-like 4	0.98205	CTCF.p2:7:0.982
chr14	106148026	106148147	reg1004345.p5	6.811	+	TSC_hg19_v1_chr14_-_106111114 AJ294731	-36970	-	BC040042 TSC_hg19_v1_chr14_-_106110945	-37163	-	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	-55750	-	TSC_hg19_v1_chr14_-_106174914 BC113815 AJ294729	26867	-	TSC_hg19_v1_chr14_-_106208542 AF487336	60463	-	AF150959 TSC_hg19_v1_chr14_-_106208714 S76144	60624	-	AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AJ294729|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.249663	CTCF.p2:-8:0.250
chr6	98153498	98153634	reg1024106.p1	6.811	+	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	-422476	-	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	-780943	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-807802	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	1129014	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	1129106	+	TSC_hg19_v1_chr6_-_99395800 BC091484 BC032641	1242223	-	AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2##BC091484|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC032641|FBXL4|26235|F-box and leucine-rich repeat protein 4	0.745373	CTCF.p2:-4:0.745
chr6	135760161	135760285	reg1020180.p1	6.810	+	TSC_hg19_v1_chr6_+_135517056 X17469	-243134	+	TSC_hg19_v1_chr6_+_135516916 AJ616799	-243317	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	-257637	+	AY133243 TSC_hg19_v1_chr6_-_135818858 DQ090887	58602	-	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	58662	-	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	58741	+	X17469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY133243|AHI1|54806|Abelson helper integration site 1##DQ090887|AHI1|54806|Abelson helper integration site 1##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271	0.995841	CTCF.p2:18:0.996
chr11	15027776	15027925	reg1020664.p1	6.809	+	M26095 X03662 M64486 BC093753 BC101599 BC143562 BC069684 BC069704 BC069760 BC069778 NM_001033952 NM_001033953 NM_001741 X00356	-34030	-	AK054728 TSC_hg19_v1_chr11_+_14926557	-101301	+	AY323817 NM_024514 BC104907 BC104909	-114077	-	BC008428 AK291188 BC092468 NM_000728	67276	+	AB236159 NM_001031853	106119	+	AB236158 NM_001042536	108633	+	M26095|CALCA|796|calcitonin-related polypeptide alpha##X03662|CALCA|796|calcitonin-related polypeptide alpha##M64486|CALCA|796|calcitonin-related polypeptide alpha##BC093753|CALCA|796|calcitonin-related polypeptide alpha##BC101599|CALCA|796|calcitonin-related polypeptide alpha##BC143562|CALCA|796|calcitonin-related polypeptide alpha##BC069684|CALCA|796|calcitonin-related polypeptide alpha##BC069704|CALCA|796|calcitonin-related polypeptide alpha##BC069760|CALCA|796|calcitonin-related polypeptide alpha##BC069778|CALCA|796|calcitonin-related polypeptide alpha##NM_001033952|CALCA|796|calcitonin-related polypeptide alpha##NM_001033953|CALCA|796|calcitonin-related polypeptide alpha##NM_001741|CALCA|796|calcitonin-related polypeptide alpha##X00356|CALCA|796|calcitonin-related polypeptide alpha##AK054728|CALCB|797|calcitonin-related polypeptide beta##AY323817|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##NM_024514|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104907|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104909|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)	0.99969	CTCF.p2:24:1.000
chr2	119129202	119129320	reg1019812.p1	6.809	+	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-283198	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-357528	-	TSC_hg19_v1_chr2_-_118771677 BC028609	-357577	-	NM_001426	476497	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	570559	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	787143	-	AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC028609|CCDC93|54520|coiled-coil domain containing 93##NM_001426|EN1|2019|engrailed homeobox 1##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2	0.705414	CTCF.p2:-27:0.705
chr22	44222404	44222536	reg1022365.p1	6.809	+	BC039315 TSC_hg19_v1_chr22_-_44208121 AK296679 AK292498 AK292411 AK058069 NM_022785 NM_198856	-14329	-	TSC_hg19_v1_chr22_+_43808109 AK289774	-414353	+	TSC_hg19_v1_chr22_+_43808019 AK290541 AK297276 AK299516 AK299531 NM_001044370	-414453	+	AK295399 AF115311 AL590119 AB587375 CR456588 CU013188 CU013476 DQ892373 DQ895583 CU688978 CU692628 BC022459 TSC_hg19_v1_chr22_-_44258315 AF176342 AF251263 AK313048 AK294622 AF188698 BC028171 NM_014351 BC030665	35833	-	BC104839 BC104843 BC143696 BC031820 AK056648 AK127172 NM_001177675 NM_138814	65379	-	AK025665 AL138578 NM_025225 TSC_hg19_v1_chr22_+_44319651 AK308995	97174	+	BC039315|EFCAB6|64800|EF-hand calcium binding domain 6##AK296679|EFCAB6|64800|EF-hand calcium binding domain 6##AK292498|EFCAB6|64800|EF-hand calcium binding domain 6##AK292411|EFCAB6|64800|EF-hand calcium binding domain 6##AK058069|EFCAB6|64800|EF-hand calcium binding domain 6##NM_022785|EFCAB6|64800|EF-hand calcium binding domain 6##NM_198856|EFCAB6|64800|EF-hand calcium binding domain 6##AK289774|MPPED1|758|metallophosphoesterase domain containing 1##AK290541|MPPED1|758|metallophosphoesterase domain containing 1##AK297276|MPPED1|758|metallophosphoesterase domain containing 1##AK299516|MPPED1|758|metallophosphoesterase domain containing 1##AK299531|MPPED1|758|metallophosphoesterase domain containing 1##NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1##AK295399|SULT4A1|25830|sulfotransferase family 4A, member 1##AF115311|SULT4A1|25830|sulfotransferase family 4A, member 1##AL590119|SULT4A1|25830|sulfotransferase family 4A, member 1##CR456588|SULT4A1|25830|sulfotransferase family 4A, member 1##CU013188|SULT4A1|25830|sulfotransferase family 4A, member 1##CU013476|SULT4A1|25830|sulfotransferase family 4A, member 1##DQ892373|SULT4A1|25830|sulfotransferase family 4A, member 1##DQ895583|SULT4A1|25830|sulfotransferase family 4A, member 1##BC022459|SULT4A1|25830|sulfotransferase family 4A, member 1##AF176342|SULT4A1|25830|sulfotransferase family 4A, member 1##AF251263|SULT4A1|25830|sulfotransferase family 4A, member 1##AK313048|SULT4A1|25830|sulfotransferase family 4A, member 1##AK294622|SULT4A1|25830|sulfotransferase family 4A, member 1##AF188698|SULT4A1|25830|sulfotransferase family 4A, member 1##BC028171|SULT4A1|25830|sulfotransferase family 4A, member 1##NM_014351|SULT4A1|25830|sulfotransferase family 4A, member 1##BC030665|SULT4A1|25830|sulfotransferase family 4A, member 1##BC104839|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC104843|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC143696|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC031820|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK056648|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK127172|PNPLA5|150379|patatin-like phospholipase domain containing 5##NM_001177675|PNPLA5|150379|patatin-like phospholipase domain containing 5##NM_138814|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK025665|PNPLA3|80339|patatin-like phospholipase domain containing 3##AL138578|PNPLA3|80339|patatin-like phospholipase domain containing 3##NM_025225|PNPLA3|80339|patatin-like phospholipase domain containing 3	0.0	
chr2	96829571	96829749	reg1017278.p1	6.809	+	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	-18501	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	-18706	-	BC107126 AJ537600 BC107127 NM_001002036	-25487	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	44395	-	TSC_hg19_v1_chr2_+_96874144 AK311432	44494	+	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	44874	-	BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.031408	
chr9	95217667	95217792	reg1023698.p1	6.809	+	AB000114 AK313055 AK225922 AY358872 BC046356 NM_005014	-31032	-	AF086912 AF100758 NM_014057 NM_033014 AK289628 AK295433	-50826	-	TSC_hg19_v1_chr9_+_95088234 BX537851 BC071726 AK307435 CU687146	-129501	+	AK027359 AK304501 TSC_hg19_v1_chr9_-_95244656 AK172737	26918	-	TSC_hg19_v1_chr9_-_95244789 AK308107 AY029191 AY358329 BC022059 BC063114 NM_001193335 NM_017680	27067	-	AB011792 AK303922 AK312820 AK296458 BX537976 NM_001197295 NM_001197296 NM_001393	80583	-	AB000114|OMD|4958|osteomodulin##AK313055|OMD|4958|osteomodulin##AK225922|OMD|4958|osteomodulin##AY358872|OMD|4958|osteomodulin##BC046356|OMD|4958|osteomodulin##NM_005014|OMD|4958|osteomodulin##AF086912|OGN|4969|osteoglycin##AF100758|OGN|4969|osteoglycin##NM_014057|OGN|4969|osteoglycin##NM_033014|OGN|4969|osteoglycin##AK289628|OGN|4969|osteoglycin##AK295433|OGN|4969|osteoglycin##BX537851|CENPP|401541|centromere protein P##BC071726|CENPP|401541|centromere protein P##AK307435|CENPP|401541|centromere protein P##AK027359|ASPN|54829|asporin##AK304501|ASPN|54829|asporin##AK172737|ASPN|54829|asporin##AK308107|ASPN|54829|asporin##AY029191|ASPN|54829|asporin##AY358329|ASPN|54829|asporin##BC022059|ASPN|54829|asporin##BC063114|ASPN|54829|asporin##NM_001193335|ASPN|54829|asporin##NM_017680|ASPN|54829|asporin##AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific	1.010922	CTCF.p2:5:0.962
chr5	105605075	105605235	reg1022308.p1	6.808	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-2706674	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-3010698	+	BC024591 NM_015216 AB463068	-3139881	+	AK308672 NM_001962 U26403	1401435	-	TSC_hg19_v1_chr5_-_107717106 AK126722	2111975	-	BC063316 NM_001163315	2112643	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.988033	CTCF.p2:-23:0.988
chr10	80697561	80697714	reg1023597.p1	6.807	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-904006	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-904081	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-908323	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	131151	+	TSC_hg19_v1_chr10_+_80899458 AK025812	201847	+	TSC_hg19_v1_chr10_+_81003207 AB033050	305493	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.808385	CTCF.p2:24:0.769
chr12	26804621	26804768	reg1020825.p2	6.807	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-456109	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-456403	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	-526773	-	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	181386	-	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	286215	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	286536	-	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)	0.514504	CTCF.p2:14:0.515
chr7	51434877	51434992	reg1020331.p1	6.807	+	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	-50448	-	AB385366 TSC_hg19_v1_chr7_-_51384416 BC136441 BC144099	-50554	-	TSC_hg19_v1_chr7_-_50861150 NM_001001555	-573780	-	NM_182595	1668414	+	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	3175148	+	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	3391945	-	BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##BC136441|COBL|23242|cordon-bleu homolog (mouse)##BC144099|COBL|23242|cordon-bleu homolog (mouse)##NM_001001555|GRB10|2887|growth factor receptor-bound protein 10##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12##NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit	0.992083	CTCF.p2:12:0.992
chr15	78287380	78287512	reg1021282.p2	6.806	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-362666	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-362747	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-574184	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	82507	-	NM_001101404	97480	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	136316	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.937043	CTCF.p2:-3:0.937
chrX	132469207	132469301	reg1020309.p1	6.806	+	EU446842 BC074762 BC117336 BC126361 AB464736 AF219119 NM_016521	-117014	-	BC101189 BC101190 BC101191 BC101192 BC069073 AF285593 NM_031907	-306956	-	AK056706 NM_001077188 NM_147175	-373832	-	AB528412 CU677845 DQ891809 DQ894992 AF064826 AY052833 AF030186 NM_001448 TSC_hg19_v1_chrX_-_132549316	79920	-	TSC_hg19_v1_chrX_-_132549514 AK312605 AY358507 BC017166	80214	-	AB527294 CU690242 DQ349136 DQ349137 DQ349138 DQ893658 DQ895822 TSC_hg19_v1_chrX_-_133119622 Z37987 L47176 AK222761 AK222766 AK310689 BC035972 U50410	650295	-	EU446842|TFDP3|51270|transcription factor Dp family, member 3##BC074762|TFDP3|51270|transcription factor Dp family, member 3##BC117336|TFDP3|51270|transcription factor Dp family, member 3##BC126361|TFDP3|51270|transcription factor Dp family, member 3##AF219119|TFDP3|51270|transcription factor Dp family, member 3##NM_016521|TFDP3|51270|transcription factor Dp family, member 3##BC101189|USP26|83844|ubiquitin specific peptidase 26##BC101190|USP26|83844|ubiquitin specific peptidase 26##BC101191|USP26|83844|ubiquitin specific peptidase 26##BC101192|USP26|83844|ubiquitin specific peptidase 26##BC069073|USP26|83844|ubiquitin specific peptidase 26##AF285593|USP26|83844|ubiquitin specific peptidase 26##NM_031907|USP26|83844|ubiquitin specific peptidase 26##AK056706|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_001077188|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_147175|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##DQ891809|GPC4|2239|glypican 4##DQ894992|GPC4|2239|glypican 4##AF064826|GPC4|2239|glypican 4##AY052833|GPC4|2239|glypican 4##AF030186|GPC4|2239|glypican 4##NM_001448|GPC4|2239|glypican 4##AK312605|GPC4|2239|glypican 4##AY358507|GPC4|2239|glypican 4##BC017166|GPC4|2239|glypican 4##DQ349136|GPC3|2719|glypican 3##DQ349137|GPC3|2719|glypican 3##DQ349138|GPC3|2719|glypican 3##DQ893658|GPC3|2719|glypican 3##DQ895822|GPC3|2719|glypican 3##Z37987|GPC3|2719|glypican 3##L47176|GPC3|2719|glypican 3##AK222761|GPC3|2719|glypican 3##AK222766|GPC3|2719|glypican 3##AK310689|GPC3|2719|glypican 3##BC035972|GPC3|2719|glypican 3##U50410|GPC3|2719|glypican 3	0.120385	
chr8	28742167	28742315	reg1021004.p1	6.805	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	-183091	+	TSC_hg19_v1_chr8_+_28559032 AB011091	-183166	+	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	-390476	+	TSC_hg19_v1_chr8_-_28747454 BC016687 AK225072 AK304525 AK298468 NM_001172562 BC025267 AK300593 AK295977 AK001733 AK225530	5219	-	NM_001145159 NM_018250	5456	-	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	5676	+	AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3##AB011091|EXTL3|2137|exostoses (multiple)-like 3##NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##BC016687|INTS9|55756|integrator complex subunit 9##AK225072|INTS9|55756|integrator complex subunit 9##AK304525|INTS9|55756|integrator complex subunit 9##AK298468|INTS9|55756|integrator complex subunit 9##NM_001172562|INTS9|55756|integrator complex subunit 9##BC025267|INTS9|55756|integrator complex subunit 9##AK300593|INTS9|55756|integrator complex subunit 9##AK295977|INTS9|55756|integrator complex subunit 9##AK001733|INTS9|55756|integrator complex subunit 9##AK225530|INTS9|55756|integrator complex subunit 9##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1	0.18214	
chr8	99570379	99570520	reg1019326.p1	6.805	+	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	-131103	+	BC132687 BC144055 TSC_hg19_v1_chr8_-_99306600 AK024017 NM_024759	-263850	-	BC011529 NM_015029	-440382	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	267398	-	NM_001142462 NM_053001 TSC_hg19_v1_chr8_+_99956669 AK074518 AK291491 AK310994 BC016936 AY038073	386208	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	455046	+	BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC132687|NIPAL2|79815|NIPA-like domain containing 2##BC144055|NIPAL2|79815|NIPA-like domain containing 2##AK024017|NIPAL2|79815|NIPA-like domain containing 2##NM_024759|NIPAL2|79815|NIPA-like domain containing 2##BC011529|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015029|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3##NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)##NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)##AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)##AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)##AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)##BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)##AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)	0.966403	CTCF.p2:0:0.966
chrX	44402378	44402531	reg1019249.p2	6.805	+	TSC_hg19_v1_chrX_-_44402101 BC035015 BC042813 NM_173794	-300	-	CU689086 AK292967 AK026496 AK297714 BC031039 NM_025184 AK291187	-199506	-	NM_000266	-569534	-	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	300859	+	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	329982	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	657659	-	BC035015|FUNDC1|139341|FUN14 domain containing 1##BC042813|FUNDC1|139341|FUN14 domain containing 1##NM_173794|FUNDC1|139341|FUN14 domain containing 1##AK292967|EFHC2|80258|EF-hand domain (C-terminal) containing 2##AK026496|EFHC2|80258|EF-hand domain (C-terminal) containing 2##AK297714|EFHC2|80258|EF-hand domain (C-terminal) containing 2##BC031039|EFHC2|80258|EF-hand domain (C-terminal) containing 2##NM_025184|EFHC2|80258|EF-hand domain (C-terminal) containing 2##AK291187|EFHC2|80258|EF-hand domain (C-terminal) containing 2##NM_000266|NDP|4693|Norrie disease (pseudoglioma)##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36	0.481063	CTCF.p2:0:0.385
chr1	1610441	1610607	reg1021233.p1	6.804	+	BC054019 TSC_hg19_v1_chr1_-_1590434 BC104661 BC009375	-20071	-	AK297700 AB010962 AJ005256 NM_006983 BC025719 AB010961 AF056200	-42954	+	TSC_hg19_v1_chr1_+_1551275 NM_001170689 AK128167 BC035109 AK098785	-59224	+	TSC_hg19_v1_chr1_-_1623947 CR936618 BC062371	13441	-	BC092507 TSC_hg19_v1_chr1_-_1624149 AK125619	13634	-	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	13693	-	BC054019|CDK11A|728642|cyclin-dependent kinase 11A##BC104661|CDK11A|728642|cyclin-dependent kinase 11A##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AK297700|MMP23B|8510|matrix metallopeptidase 23B##AB010962|MMP23B|8510|matrix metallopeptidase 23B##AJ005256|MMP23B|8510|matrix metallopeptidase 23B##NM_006983|MMP23B|8510|matrix metallopeptidase 23B##BC025719|MMP23B|8510|matrix metallopeptidase 23B##AB010961|MMP23B|8510|matrix metallopeptidase 23B##AF056200|MMP23B|8510|matrix metallopeptidase 23B##NM_001170689|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK128167|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC035109|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK098785|MIB2|142678|mindbomb homolog 2 (Drosophila)##CR936618|SLC35E2B|728661|solute carrier family 35, member E2B##BC062371|SLC35E2|9906|solute carrier family 35, member E2##BC092507|SLC35E2B|728661|solute carrier family 35, member E2B##AK125619|SLC35E2B|728661|solute carrier family 35, member E2B##AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B	0.042856	
chr12	58087534	58087638	reg1021227.p1	6.804	+	TSC_hg19_v1_chr12_-_58026955 AB209460 AK289690 BC029828 NM_001478 AK299845	-60642	-	M83651 TSC_hg19_v1_chr12_-_58026719	-60921	-	AK293432 TSC_hg19_v1_chr12_-_58026433 AK302503	-61141	-	NM_001017956 NM_001017957 NM_001017958 NM_006812 AK303291 AK291374 TSC_hg19_v1_chr12_+_58087929 AB002806 AK129781 AK293435 AK294870 AK130733 AK296770 AK298532 AK303858 AK304533 BC000532 BC007254 BC023513 AB590116 CR456791 CU674262 CU675585 DQ892759 DQ896004	254	+	TSC_hg19_v1_chr12_+_58120054 AK301303 BC069024 BC098453 BC039697 BC019026	32482	+	AY128689 NM_001122772	44442	-	AB209460|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK289690|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##BC029828|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##NM_001478|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK299845|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##M83651|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK293432|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK302503|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##NM_001017956|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##NM_001017957|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##NM_001017958|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##NM_006812|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK303291|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK291374|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AB002806|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK129781|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK293435|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK294870|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK130733|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK296770|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK298532|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK303858|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK304533|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##BC000532|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##BC007254|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##BC023513|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##CR456791|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##DQ892759|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##DQ896004|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK301303|LOC100130776|100130776|uncharacterized LOC100130776##BC069024|LOC100130776|100130776|uncharacterized LOC100130776##BC039697|LOC100130776|100130776|uncharacterized LOC100130776##BC019026|LOC100130776|100130776|uncharacterized LOC100130776##AY128689|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##NM_001122772|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	0.0	
chr7	101768621	101768789	reg1018331.p1	6.804	+	M74099 NM_181552	-307824	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-309496	+	BC002778 NM_138403	-496130	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	159692	+	TSC_hg19_v1_chr7_+_101928431 AB000520	159738	+	NM_001146210	228183	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.018586	
chr9	14846906	14847049	reg1020801.p1	6.804	+	BC031064 NM_001177704	-67447	-	AF400435 BC069371 BC069405 BC069491 BC069503 BC103976 BC103977 CU686794 CU686860 NM_005454	-124286	-	TSC_hg19_v1_chr9_-_14693475 BC042558 NM_178566	-153508	-	AB160987 TSC_hg19_v1_chr9_-_14869016	22022	-	BX537574 NM_144966	64015	-	AK301427 NM_001168342	403178	-	BC031064|FREM1|158326|FRAS1 related extracellular matrix 1##NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1##AF400435|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069371|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069405|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069491|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069503|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC103976|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC103977|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##NM_005454|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC042558|ZDHHC21|340481|zinc finger, DHHC-type containing 21##NM_178566|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AB160987|FREM1|158326|FRAS1 related extracellular matrix 1##BX537574|FREM1|158326|FRAS1 related extracellular matrix 1##NM_144966|FREM1|158326|FRAS1 related extracellular matrix 1##AK301427|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168342|TTC39B|158219|tetratricopeptide repeat domain 39B	0.999494	CTCF.p2:-19:0.999
chr1	240895729	240895845	reg1019194.p1	6.803	+	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	-120333	-	BC046632 TSC_hg19_v1_chr1_-_240775431	-120378	-	TSC_hg19_v1_chr1_+_240255182 NM_020066	-640610	+	AF090116 AK314862 TSC_hg19_v1_chr1_-_241520451	624631	-	TSC_hg19_v1_chr1_-_241520469 BC022009 NM_002924	624685	-	TSC_hg19_v1_chr1_-_241683023 BT009839 AB590519 EU176358 BC017444 BC003108 U48857 U59309	787245	-	AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2##BC046632|GREM2|64388|gremlin 2##NM_020066|FMN2|56776|formin 2##AF090116|RGS7|6000|regulator of G-protein signaling 7##AK314862|RGS7|6000|regulator of G-protein signaling 7##BC022009|RGS7|6000|regulator of G-protein signaling 7##NM_002924|RGS7|6000|regulator of G-protein signaling 7##BT009839|FH|2271|fumarate hydratase##EU176358|FH|2271|fumarate hydratase##BC017444|FH|2271|fumarate hydratase##BC003108|FH|2271|fumarate hydratase##U48857|FH|2271|fumarate hydratase##U59309|FH|2271|fumarate hydratase	0.940065	CTCF.p2:14:0.940
chr20	24083073	24083165	reg1015404.p1	6.803	+	BC040904 NM_178311	-113704	-	L20492 L20491 NM_178312	-115648	-	AB590893 CU686872 HQ447459 BC069514 X70377 BC062678 NM_001900	-222773	-	AK024282 NM_024893	366715	+	TSC_hg19_v1_chr20_+_24450295 BC030637	367183	+	TSC_hg19_v1_chr20_+_24929865 NM_003650	846744	+	BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20492|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20491|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178312|GGTLC1|92086|gamma-glutamyltransferase light chain 1##HQ447459|CST5|1473|cystatin D##BC069514|CST5|1473|cystatin D##X70377|CST5|1473|cystatin D##BC062678|CST5|1473|cystatin D##NM_001900|CST5|1473|cystatin D##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1##BC030637|SYNDIG1|79953|synapse differentiation inducing 1##NM_003650|CST7|8530|cystatin F (leukocystatin)	0.991701	CTCF.p2:6:0.992
chr2	26407678	26407788	reg1021837.p1	6.803	+	AK090454 NM_001191033	-4149	+	AB124552 NM_001168241	-11774	+	AF086917 AF106681 BC000896 AB529109 AF297660 AF498945 CR457303 EU831649 EU831733 TSC_hg19_v1_chr2_+_26257540 AF091032	-150266	+	CU679263 DQ892776 DQ896023 FJ626228 TSC_hg19_v1_chr2_-_26467495 AK302532 AK293398 AK299258 AK313027 D16480 BC009235 GU727642 U04627	59748	-	TSC_hg19_v1_chr2_-_26467501 NM_000182	59849	-	NM_000183 TSC_hg19_v1_chr2_+_26467773 BC066963 BC017564	59966	+	AK090454|FAM59B|150946|family with sequence similarity 59, member B##NM_001191033|FAM59B|150946|family with sequence similarity 59, member B##AB124552|FAM59B|150946|family with sequence similarity 59, member B##NM_001168241|FAM59B|150946|family with sequence similarity 59, member B##AF086917|RAB10|10890|RAB10, member RAS oncogene family##AF106681|RAB10|10890|RAB10, member RAS oncogene family##BC000896|RAB10|10890|RAB10, member RAS oncogene family##AF297660|RAB10|10890|RAB10, member RAS oncogene family##AF498945|RAB10|10890|RAB10, member RAS oncogene family##CR457303|RAB10|10890|RAB10, member RAS oncogene family##EU831649|RAB10|10890|RAB10, member RAS oncogene family##EU831733|RAB10|10890|RAB10, member RAS oncogene family##AF091032|RAB10|10890|RAB10, member RAS oncogene family##DQ892776|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##DQ896023|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##FJ626228|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK302532|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK293398|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK299258|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK313027|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##D16480|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##BC009235|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##GU727642|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##U04627|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##NM_000182|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##NM_000183|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##BC066963|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##BC017564|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit	0.013605	
chr6	11374568	11374732	reg1021614.p1	6.803	+	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-141740	-	L43821 TSC_hg19_v1_chr6_-_11232900	-141750	-	U64317 BC020686 TSC_hg19_v1_chr6_-_11232894 BC050740 BC040207	-141759	-	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	7890	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	163848	+	NM_001143948 NM_032744	404629	-	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105	0.0	
chr8	43553998	43554178	reg1021273.p1	6.803	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	-406483	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-558441	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-558455	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	4619407	+	TSC_hg19_v1_chr8_+_48173521 AK303579	4619431	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	4619444	+	AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146	0.0	
chr1	16912005	16912154	reg1024677.p1	6.802	+	BC028053 TSC_hg19_v1_chr1_-_16825680	-86428	-	TSC_hg19_v1_chr1_+_16767236 BC017014 AK001282 AB463921 AK024468 AM393342	-144834	+	AK223344 TSC_hg19_v1_chr1_+_16767218 AK300764 AK302227 AK023545 BC018914	-144854	+	TSC_hg19_v1_chr1_-_16940046 AK123260 AY894575 NM_017940 BC066930 BC010124 BC082236 BC110431 AK055895 BC093404	27817	-	TSC_hg19_v1_chr1_-_16971175 AK090414	59087	-	AK123337 TSC_hg19_v1_chr1_-_16971178	59098	-	BC017014|NECAP2|55707|NECAP endocytosis associated 2##AK001282|NECAP2|55707|NECAP endocytosis associated 2##AK024468|NECAP2|55707|NECAP endocytosis associated 2##AM393342|NECAP2|55707|NECAP endocytosis associated 2##AK223344|NECAP2|55707|NECAP endocytosis associated 2##AK300764|NECAP2|55707|NECAP endocytosis associated 2##AK302227|NECAP2|55707|NECAP endocytosis associated 2##AK023545|NECAP2|55707|NECAP endocytosis associated 2##BC018914|NECAP2|55707|NECAP endocytosis associated 2##AK123260|NBPF1|55672|neuroblastoma breakpoint family, member 1##AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_017940|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC066930|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC010124|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC110431|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK055895|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC093404|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK123337|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2	0.0	
chr16	33619134	33619282	reg1018161.p2	6.802	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-357075	+	AL133588 NM_016212	-357694	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-413610	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	13036064	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	13036098	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	13103854	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	2.767851	CTCF.p2:-3:0.987	CTCF.p2:55:0.775	CTCF.p2:-98:0.791
chr4	109604749	109604853	reg1017995.p1	6.802	+	AF068297 TSC_hg19_v1_chr4_+_109571786 AK312185 DQ893222 DQ896551 AF343342	-33006	+	TSC_hg19_v1_chr4_+_109571754 NM_021227 BC054857 BC016321 AF161425 AF201937	-33048	+	AY762981 TSC_hg19_v1_chr4_+_109543670	-61131	+	AK091888 AX747236 AK294072 AJ298293 AK294235 BC022526 NM_001146590 NM_001146627 NM_031279	79342	-	AF293340 AF293341 NM_032518 NM_198721 TSC_hg19_v1_chr4_-_110223816	619006	-	TSC_hg19_v1_chr4_+_110354836 AJ131245	750046	+	AF068297|OSTC|58505|oligosaccharyltransferase complex subunit##AK312185|OSTC|58505|oligosaccharyltransferase complex subunit##DQ893222|OSTC|58505|oligosaccharyltransferase complex subunit##DQ896551|OSTC|58505|oligosaccharyltransferase complex subunit##AF343342|OSTC|58505|oligosaccharyltransferase complex subunit##NM_021227|OSTC|58505|oligosaccharyltransferase complex subunit##BC054857|OSTC|58505|oligosaccharyltransferase complex subunit##BC016321|OSTC|58505|oligosaccharyltransferase complex subunit##AF161425|OSTC|58505|oligosaccharyltransferase complex subunit##AF201937|OSTC|58505|oligosaccharyltransferase complex subunit##AY762981|RPL34|6164|ribosomal protein L34##AK091888|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294072|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AJ298293|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294235|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##BC022526|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146590|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146627|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_031279|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AF293340|COL25A1|84570|collagen, type XXV, alpha 1##AF293341|COL25A1|84570|collagen, type XXV, alpha 1##NM_032518|COL25A1|84570|collagen, type XXV, alpha 1##NM_198721|COL25A1|84570|collagen, type XXV, alpha 1##AJ131245|SEC24B|10427|SEC24 family, member B (S. cerevisiae)	0.693276	CTCF.p2:-8:0.693
chr4	175685405	175685547	reg1023326.p1	6.802	+	AK300524 NM_000860 NM_001145816	-241685	-	U63296 X82460 BC007691 BC018986 J05594 L76465 AK058013 AK300940 AK314624 AK300125 TSC_hg19_v1_chr4_-_175443639	-241856	-	BC014903 NM_012180 AK123740	-480069	-	U93917 BC036086 NM_001042543 NM_006529	64944	-	NM_001130703 NM_001130704 NM_001130705 NM_014269 AK292410 BC036070	154057	+	CU692222 CU692662 DQ892372 DQ895581 TSC_hg19_v1_chr4_-_176733403	1047917	-	AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##U63296|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##X82460|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC007691|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC018986|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##J05594|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##L76465|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK058013|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300940|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK314624|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300125|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC014903|FBXO8|26269|F-box protein 8##NM_012180|FBXO8|26269|F-box protein 8##AK123740|FBXO8|26269|F-box protein 8##U93917|GLRA3|8001|glycine receptor, alpha 3##BC036086|GLRA3|8001|glycine receptor, alpha 3##NM_001042543|GLRA3|8001|glycine receptor, alpha 3##NM_006529|GLRA3|8001|glycine receptor, alpha 3##NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29##NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29##AK292410|ADAM29|11086|ADAM metallopeptidase domain 29##BC036070|ADAM29|11086|ADAM metallopeptidase domain 29##DQ892372|GPM6A|2823|glycoprotein M6A##DQ895581|GPM6A|2823|glycoprotein M6A	0.980276	CTCF.p2:-16:0.980
chr11	102485328	102485474	reg1021172.p2	6.801	+	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	-83942	-	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-161788	-	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-267373	+	AB527354 NM_004771 Y12779	10654	-	AB527320 AF195192 AY358752 NM_022122	91054	-	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	110252	-	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	0.036033	
chr14	21074587	21074691	reg1020373.p1	6.801	+	HQ258082 AY665807 BC130347 BC130349 NM_001024822	-15709	-	BX161458 NM_145250	-16237	-	AY907670 EF061296 EF061297 EF061298 EF061299 EF061300 EF061301 EF061302 EF061303 EF061304 NM_001001673 NM_001110356 NM_001110357 NM_001110358 NM_001110359 NM_001110360 NM_001110361	-45550	-	NM_001001968	35210	-	FJ236304 NM_001145 AK092422 NM_002937	77714	+	TSC_hg19_v1_chr14_+_21152776 AK313989 BC015520 BC054880 BX248010	78137	+	HQ258082|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##AY665807|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BC130347|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BC130349|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##NM_001024822|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BX161458|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##NM_145250|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##AY907670|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061296|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061297|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061298|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061299|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061300|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061301|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061302|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061303|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061304|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001001673|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110356|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110357|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110358|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110359|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110360|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110361|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001001968|OR6S1|341799|olfactory receptor, family 6, subfamily S, member 1##FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5##AK092422|RNASE4|6038|ribonuclease, RNase A family, 4##NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4##AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC015520|RNASE4|6038|ribonuclease, RNase A family, 4##BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BX248010|RNASE4|6038|ribonuclease, RNase A family, 4	0.011524	
chr17	76015594	76015717	reg1016926.p2	6.801	+	BC039479 NM_001142640 NM_018996	-15373	+	TSC_hg19_v1_chr17_+_75543021 AK096234	-472635	+	AK056495 NM_001113495	-544331	+	TSC_hg19_v1_chr17_-_76124768 AK074065	109117	-	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	109183	-	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	111211	+	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK074065|TMC6|11322|transmembrane channel-like 6##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8	0.972144	CTCF.p2:-8:0.972
chr2	61045662	61045792	reg1020998.p2	6.801	+	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	-62243	+	AF080216 TSC_hg19_v1_chr2_-_60780784	-264949	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	-265205	-	TSC_hg19_v1_chr2_+_61108702 AK303926	62978	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	63010	+	TSC_hg19_v1_chr2_+_61108776 BC143885 BC117191 X75042	63060	+	NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC143885|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC117191|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##X75042|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)	0.750956	CTCF.p2:-6:0.751
chr5	114405176	114405309	reg1024457.p1	6.801	+	BC015371 NM_170775 BC040722	-635993	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	-706781	+	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	-707193	+	TSC_hg19_v1_chr5_-_114505606 AK316422 AK296389	100362	-	AB196558 AJ272269 BC130334 AK125426 BC045164 BC046096 NM_001017397 NM_001017398 NM_018700	110745	-	AY780790 AB590094 TSC_hg19_v1_chr5_-_114598563 NM_005023	193324	-	BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK316422|TRIM36|55521|tripartite motif containing 36##AK296389|TRIM36|55521|tripartite motif containing 36##AB196558|TRIM36|55521|tripartite motif containing 36##AJ272269|TRIM36|55521|tripartite motif containing 36##BC130334|TRIM36|55521|tripartite motif containing 36##AK125426|TRIM36|55521|tripartite motif containing 36##BC045164|TRIM36|55521|tripartite motif containing 36##BC046096|TRIM36|55521|tripartite motif containing 36##NM_001017397|TRIM36|55521|tripartite motif containing 36##NM_001017398|TRIM36|55521|tripartite motif containing 36##NM_018700|TRIM36|55521|tripartite motif containing 36##AY780790|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##NM_005023|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit	0.975351	CTCF.p2:11:0.975
chr6	20127105	20127220	reg1019558.p2	6.801	+	TSC_hg19_v1_chr6_+_19838612 AF085889	-288479	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	-289527	+	AK096832 NM_182757 AB076367 BC063311 AL832329	-1739495	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	85510	-	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	274941	+	CR749285 NM_001243076	276871	+	BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3	0.999935	CTCF.p2:-11:1.000
chr7	102135388	102135505	reg1020936.p2	6.801	+	DQ893151 DQ896446 TSC_hg19_v1_chr7_-_102119367 X98433 BC040116 BC024165 BC141830 BC139902 BC065711 L37127 X82385 AK290515 NM_006234	-16103	-	TSC_hg19_v1_chr7_+_102105459 AB209379 CU688900	-29954	+	TSC_hg19_v1_chr7_+_102105430 AL133057 BC030547 NM_152892 AK290967 AK313771	-30038	+	AK302217 NM_001031618 NM_001166339	56232	+	AJ277739 AJ277740 AJ277741 AB384935 BC056864 BC071870 TSC_hg19_v1_chr7_-_102212997 BC044209 BC050598	77541	-	AF468111 BC110985 TSC_hg19_v1_chr7_-_102213031 AB209398 BC141857 AK309487 NM_001097615	77594	-	DQ893151|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##DQ896446|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X98433|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC040116|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC024165|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC141830|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC139902|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC065711|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##L37127|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X82385|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AK290515|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##NM_006234|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AB209379|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AL133057|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##BC030547|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##NM_152892|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK290967|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK313771|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##AJ277739|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AJ277740|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277741|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AF468111|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AB209398|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_001097615|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3	0.155716	
chr9	13088881	13089004	reg1022515.p1	6.801	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	-313161	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	-313926	+	NM_000550 X51420 BC052608	-395517	+	AB384682 AF093419 BC140793 BC144564 NM_003829	161396	-	AB210041 TSC_hg19_v1_chr9_-_13279602	190640	-	BX537698 TSC_hg19_v1_chr9_-_14087002	998010	-	HQ257895|C9orf150|286343|chromosome 9 open reading frame 150##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##AF093419|MPDZ|8777|multiple PDZ domain protein##BC140793|MPDZ|8777|multiple PDZ domain protein##BC144564|MPDZ|8777|multiple PDZ domain protein##NM_003829|MPDZ|8777|multiple PDZ domain protein##AB210041|MPDZ|8777|multiple PDZ domain protein##BX537698|NFIB|4781|nuclear factor I/B	0.986177	CTCF.p2:-8:0.986
chr1	48669108	48669251	reg1023306.p1	6.799	+	NM_001194986	-206618	-	AF042832 NM_004474	-767491	+	AF275722 NM_012186	-787436	+	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	19213	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	268499	-	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	268666	-	NM_001194986|LOC388630|388630|UPF0632 protein A##AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6	0.0	
chr2	213385197	213385317	reg1021129.p1	6.799	+	AK316425 NM_001122634 AK302778 AY317138	-1927172	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-1963868	+	NM_001122633 AB208800	-2042839	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	18058	-	AK301503 AF130863 NM_016260	629798	-	BC028936 NM_001079526	631075	-	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	0.0	
chr2	238877252	238877352	reg1016800.p1	6.799	+	TSC_hg19_v1_chr2_+_238875689 BC010549 AK294107	-1599	+	TSC_hg19_v1_chr2_+_238875673 AK290063	-1622	+	NM_080678 TSC_hg19_v1_chr2_+_238875655 AK002119 AK293334 AK297502 AK303094	-1678	+	AB209458 NM_016510 TSC_hg19_v1_chr2_+_238969639	92299	+	TSC_hg19_v1_chr2_+_238969669 AK301009 BC007891 AF175767 AK298409 DQ893234 DQ896564 CU675851	92378	+	TSC_hg19_v1_chr2_+_238969747 BC000586 AK293283	92465	+	BC010549|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK294107|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK290063|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##NM_080678|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK293334|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK297502|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK303094|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AB209458|SCLY|51540|selenocysteine lyase##NM_016510|SCLY|51540|selenocysteine lyase##AK301009|SCLY|51540|selenocysteine lyase##BC007891|SCLY|51540|selenocysteine lyase##AF175767|SCLY|51540|selenocysteine lyase##AK298409|SCLY|51540|selenocysteine lyase##DQ893234|SCLY|51540|selenocysteine lyase##DQ896564|SCLY|51540|selenocysteine lyase##BC000586|SCLY|51540|selenocysteine lyase##AK293283|SCLY|51540|selenocysteine lyase	0.820773	CTCF.p2:-6:0.317	CTCF.p2:-76:0.504
chrX	71079627	71079761	reg1021889.p1	6.799	+	NM_001145139 NM_001145140	-96555	+	NM_001145139 NM_001145140	-141560	-	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	-241362	-	TSC_hg19_v1_chrX_+_71130694 NM_001013627	51084	+	AB082532 BC151224 NM_001024455 TSC_hg19_v1_chrX_-_71351772	272097	-	AK126598 AY572224 NM_207422	284339	+	NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001013627|NHSL2|340527|NHS-like 2##AB082532|RGAG4|340526|retrotransposon gag domain containing 4##BC151224|RGAG4|340526|retrotransposon gag domain containing 4##NM_001024455|RGAG4|340526|retrotransposon gag domain containing 4##AK126598|FLJ44635|392490|TPT1-like protein##AY572224|FLJ44635|392490|TPT1-like protein##NM_207422|FLJ44635|392490|TPT1-like protein	0.82611	CTCF.p2:17:0.826
chr17	54397021	54397119	reg1016129.p1	6.798	+	NM_153228 AK095654	-166234	+	TSC_hg19_v1_chr17_+_53828441 AF114430 NM_001102402 AK058120 BC005112	-568470	+	AK024667 AK314509 TSC_hg19_v1_chr17_+_53828413 BC012084	-568649	+	AK314080 NM_005450 TSC_hg19_v1_chr17_+_54671080	273999	+	BC093905 BC093907 NM_001085430	496179	-	BC041467 TSC_hg19_v1_chr17_-_54911271	514203	-	NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AF114430|PCTP|58488|phosphatidylcholine transfer protein##NM_001102402|PCTP|58488|phosphatidylcholine transfer protein##AK058120|PCTP|58488|phosphatidylcholine transfer protein##BC005112|PCTP|58488|phosphatidylcholine transfer protein##AK024667|PCTP|58488|phosphatidylcholine transfer protein##AK314509|PCTP|58488|phosphatidylcholine transfer protein##BC012084|PCTP|58488|phosphatidylcholine transfer protein##AK314080|NOG|9241|noggin##NM_005450|NOG|9241|noggin##BC093905|C17orf67|339210|chromosome 17 open reading frame 67##BC093907|C17orf67|339210|chromosome 17 open reading frame 67##NM_001085430|C17orf67|339210|chromosome 17 open reading frame 67##BC041467|C17orf67|339210|chromosome 17 open reading frame 67	0.466426	CTCF.p2:24:0.466
chr2	18299025	18299136	reg1020405.p1	6.798	+	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	-239126	+	NM_001105569	-301295	+	TSC_hg19_v1_chr2_+_17935407 CR936783 NM_001130009 AK093631 AX748233	-363669	+	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	442836	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	471730	-	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	1259299	-	AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_001105569|MSGN1|343930|mesogenin 1##CR936783|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##NM_001130009|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK093631|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)	0.061893	
chr3	65718133	65718253	reg1021857.p1	6.798	+	TSC_hg19_v1_chr3_-_64673677 BC036770 AK310571	-1044507	-	TSC_hg19_v1_chr3_-_64673334 AF261918 BC130578 BC171764 AF488803 NM_182920	-1044846	-	AB037733 TSC_hg19_v1_chr3_-_64672299	-1045898	-	BC062367 NM_001033057 NM_004742 NM_015520 TSC_hg19_v1_chr3_-_66024518	306320	-	AK092495 AX747571 NM_173471	401091	+	NM_001164796	552974	+	BC036770|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AK310571|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##NM_001164796|SLC25A26|115286|solute carrier family 25, member 26	0.922994	CTCF.p2:5:0.923
chrX	134340497	134340621	reg1021128.p1	6.798	+	AF520814 AY352211 NM_001031705 NM_017863	-34809	-	AK123302 TSC_hg19_v1_chrX_-_134232743	-107824	-	BC008096 TSC_hg19_v1_chrX_-_134186208 BC071991 AL117556 BC000393 BC019300 NM_001078172 NM_001134321	-154430	-	AK091687 AX747129 NM_001185063 NM_007131 AK290215	89413	-	TSC_hg19_v1_chrX_-_134478038 AL831984 BC029787	137444	-	AY927530 NM_152695 TSC_hg19_v1_chrX_+_134478720 AK314344 AK074194 AL833407 AY280801 BC060768 BC065938 AL833109	138165	+	AF520814|CXorf48|54967|chromosome X open reading frame 48##AY352211|CXorf48|54967|chromosome X open reading frame 48##NM_001031705|CXorf48|54967|chromosome X open reading frame 48##NM_017863|CXorf48|54967|chromosome X open reading frame 48##AK123302|LINC00087|644596|long intergenic non-protein coding RNA 87##BC008096|FAM127B|26071|family with sequence similarity 127, member B##BC071991|FAM127B|26071|family with sequence similarity 127, member B##AL117556|FAM127B|26071|family with sequence similarity 127, member B##BC000393|FAM127B|26071|family with sequence similarity 127, member B##BC019300|FAM127B|26071|family with sequence similarity 127, member B##NM_001078172|FAM127B|26071|family with sequence similarity 127, member B##NM_001134321|FAM127B|26071|family with sequence similarity 127, member B##AK091687|ZNF75D|7626|zinc finger protein 75D##NM_001185063|ZNF75D|7626|zinc finger protein 75D##NM_007131|ZNF75D|7626|zinc finger protein 75D##AK290215|ZNF75D|7626|zinc finger protein 75D##AL831984|ZNF75D|7626|zinc finger protein 75D##BC029787|ZNF75D|7626|zinc finger protein 75D##AY927530|ZNF449|203523|zinc finger protein 449##NM_152695|ZNF449|203523|zinc finger protein 449##AK314344|ZNF449|203523|zinc finger protein 449##AK074194|ZNF449|203523|zinc finger protein 449##AL833407|ZNF449|203523|zinc finger protein 449##AY280801|ZNF449|203523|zinc finger protein 449##BC060768|ZNF449|203523|zinc finger protein 449##BC065938|ZNF449|203523|zinc finger protein 449##AL833109|ZNF449|203523|zinc finger protein 449	0.830068	CTCF.p2:-10:0.830
chr3	124269411	124269507	reg1019788.p2	6.796	+	TSC_hg19_v1_chr3_+_124103674 AK131379	-165836	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-455854	+	AF303889 NM_017578	-559261	-	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	34069	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	179780	+	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	179857	+	AK131379|KALRN|8997|kalirin, RhoGEF kinase##AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase##AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase	0.996976	CTCF.p2:11:0.997
chr9	91990359	91990530	reg1020119.p1	6.796	+	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-57026	+	TSC_hg19_v1_chr9_+_91926112 NM_001827 X54942 BC006458 AB527990 BT006630 CR407630 CR542118	-64286	+	BC026314 NM_016848 TSC_hg19_v1_chr9_-_91793734	-196734	-	BC054500 NM_001142287 NM_006378	104166	-	BX648216 TSC_hg19_v1_chr9_-_92113005	122563	-	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	229537	+	AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2##X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma	0.931781	CTCF.p2:-12:0.932
chr11	67976745	67976844	reg1019733.p1	6.795	+	NM_001277 NM_212469 TSC_hg19_v1_chr11_-_67888859	-87906	-	D10704 BC036471 TSC_hg19_v1_chr11_-_67888844	-88037	-	AF025374 NM_006053	-166348	+	TSC_hg19_v1_chr11_-_67981112 AF264782 BC002522 BC065287 BC087834 NM_016028 NM_017635 BC108304 AK314336 AK299201	4185	-	TSC_hg19_v1_chr11_-_68039418 AF264781	62592	-	TSC_hg19_v1_chr11_-_68039453 NM_022338	62664	-	NM_001277|CHKA|1119|choline kinase alpha##NM_212469|CHKA|1119|choline kinase alpha##D10704|CHKA|1119|choline kinase alpha##BC036471|CHKA|1119|choline kinase alpha##AF025374|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##NM_006053|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##AF264782|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC002522|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC065287|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC087834|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_016028|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_017635|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC108304|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK314336|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK299201|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AF264781|C11orf24|53838|chromosome 11 open reading frame 24##NM_022338|C11orf24|53838|chromosome 11 open reading frame 24	0.040029	
chr1	223254727	223254850	reg1001487.p1	6.794	+	TSC_hg19_v1_chr1_+_222988422 NM_032890	-266397	+	AK125494 NM_207468	-344231	+	TSC_hg19_v1_chr1_+_222886732 AK315930 AK293974	-368055	+	TSC_hg19_v1_chr1_-_223316591 NM_003268	61818	-	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	282683	-	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	311977	+	NM_032890|DISP1|84976|dispatched homolog 1 (Drosophila)##AK125494|FAM177B|400823|family with sequence similarity 177, member B##NM_207468|FAM177B|400823|family with sequence similarity 177, member B##AK315930|BROX|148362|BRO1 domain and CAAX motif containing##AK293974|BROX|148362|BRO1 domain and CAAX motif containing##NM_003268|TLR5|7100|toll-like receptor 5##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4##NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65	0.0	
chr1	51524552	51524653	reg1020749.p1	6.794	+	TSC_hg19_v1_chr1_+_51435925 U17074 CU674290 AB587581 CR450289 DQ891516 DQ894707	-88627	+	NM_078626	-88961	+	TSC_hg19_v1_chr1_+_51434477 AK021794 BC017036	-90124	+	AK130995 NM_001136508	43300	+	TSC_hg19_v1_chr1_+_51701939 AK293047	177325	+	TSC_hg19_v1_chr1_+_51701944 NM_014372	177347	+	U17074|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##CR450289|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##DQ891516|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##DQ894707|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##NM_078626|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##AK021794|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##BC017036|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##AK130995|C1orf185|284546|chromosome 1 open reading frame 185##NM_001136508|C1orf185|284546|chromosome 1 open reading frame 185##AK293047|RNF11|26994|ring finger protein 11##NM_014372|RNF11|26994|ring finger protein 11	0.062514	
chr19	6048058	6048201	reg1000877.p1	6.794	+	AK299856 TSC_hg19_v1_chr19_-_5978306 NM_003624 NM_007320 NM_007322	-69845	-	AK025300 AK299260 AK314343 TSC_hg19_v1_chr19_-_5978152	-69978	-	CU678680 DQ234346 AK308205 TSC_hg19_v1_chr19_-_5978122 BC004349 AL050149 AK222813 AK301942 Y08698 AK222990	-70017	-	TSC_hg19_v1_chr19_-_6110512 AK291196 BC071571 X76091	62394	-	TSC_hg19_v1_chr19_-_6110613 BC028579 AK303321 NM_000635 NM_134433	62483	-	AY009107 BC022027 AK093433 AX748123 AK302604 AJ577571 NM_030924 BC090046 AL136854	87624	+	AK299856|RANBP3|8498|RAN binding protein 3##NM_003624|RANBP3|8498|RAN binding protein 3##NM_007320|RANBP3|8498|RAN binding protein 3##NM_007322|RANBP3|8498|RAN binding protein 3##AK025300|RANBP3|8498|RAN binding protein 3##AK299260|RANBP3|8498|RAN binding protein 3##AK314343|RANBP3|8498|RAN binding protein 3##DQ234346|RANBP3|8498|RAN binding protein 3##AK308205|RANBP3|8498|RAN binding protein 3##BC004349|RANBP3|8498|RAN binding protein 3##AL050149|RANBP3|8498|RAN binding protein 3##AK222813|RANBP3|8498|RAN binding protein 3##AK301942|RANBP3|8498|RAN binding protein 3##Y08698|RANBP3|8498|RAN binding protein 3##AK222990|RANBP3|8498|RAN binding protein 3##AK291196|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC071571|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##X76091|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC028579|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK303321|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_000635|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_134433|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AY009107|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC022027|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK093433|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK302604|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AJ577571|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##NM_030924|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC090046|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AL136854|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2	1.349763	CTCF.p2:0:0.228	CTCF.p2:49:0.930
chr1	85410499	85410613	reg1003415.p1	6.793	+	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	-51670	-	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-254480	-	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-370450	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	52152	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	103589	-	TSC_hg19_v1_chr1_-_85514184 BX647497 AK314354 NM_001253693 NM_018298	103642	-	AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3##BX647497|MCOLN3|55283|mucolipin 3##AK314354|MCOLN3|55283|mucolipin 3##NM_001253693|MCOLN3|55283|mucolipin 3##NM_018298|MCOLN3|55283|mucolipin 3	0.76871	CTCF.p2:-16:0.769
chr10	100069443	100069578	reg1019572.p2	6.792	+	TSC_hg19_v1_chr10_-_100027952 AK172781 BC013153 BC035470 NM_032211	-41518	-	TSC_hg19_v1_chr10_+_99894427 AF525304 BC047908 BC098175 BC098268 BC098359 BC099848	-175075	+	NM_014472 AK292546 TSC_hg19_v1_chr10_+_99894414	-175113	+	CU675263 DQ893418 DQ896787 AK075265 TSC_hg19_v1_chr10_-_100174919 AK225637 AK074429 BC006131 AK295699 NM_032709	105424	-	BC002514 TSC_hg19_v1_chr10_-_100206650	137136	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	137165	-	AK172781|LOXL4|84171|lysyl oxidase-like 4##BC013153|LOXL4|84171|lysyl oxidase-like 4##BC035470|LOXL4|84171|lysyl oxidase-like 4##NM_032211|LOXL4|84171|lysyl oxidase-like 4##AF525304|C10orf28|27291|chromosome 10 open reading frame 28##BC047908|C10orf28|27291|chromosome 10 open reading frame 28##BC098175|C10orf28|27291|chromosome 10 open reading frame 28##BC098268|C10orf28|27291|chromosome 10 open reading frame 28##BC098359|C10orf28|27291|chromosome 10 open reading frame 28##BC099848|C10orf28|27291|chromosome 10 open reading frame 28##NM_014472|C10orf28|27291|chromosome 10 open reading frame 28##AK292546|C10orf28|27291|chromosome 10 open reading frame 28##DQ893418|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##DQ896787|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK075265|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK225637|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK074429|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##BC006131|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK295699|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##NM_032709|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1	0.860097	CTCF.p2:0:0.860
chr1	223418309	223418429	reg1019722.p2	6.792	+	TSC_hg19_v1_chr1_-_223316591 NM_003268	-101763	-	TSC_hg19_v1_chr1_+_222988422 NM_032890	-429978	+	AK125494 NM_207468	-507812	+	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	119102	-	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	148396	+	TSC_hg19_v1_chr1_-_223853364 BC157893	435001	-	NM_003268|TLR5|7100|toll-like receptor 5##NM_032890|DISP1|84976|dispatched homolog 1 (Drosophila)##AK125494|FAM177B|400823|family with sequence similarity 177, member B##NM_207468|FAM177B|400823|family with sequence similarity 177, member B##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4##NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65##BC157893|CAPN8|388743|calpain 8	0.374162	CTCF.p2:15:0.374
chr12	92385332	92385461	reg1022274.p1	6.792	+	NM_001920	-808591	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-808816	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-812085	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	154247	-	AJ845165 AJ845166 NM_001025233	432338	+	AJ845168 NM_001025232	436527	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.0	
chr16	73066471	73066621	reg1021106.p1	6.792	+	TSC_hg19_v1_chr16_-_72991733 BC029653	-74841	-	TSC_hg19_v1_chr16_+_72699031 AK021563	-367482	+	AK122925 NM_001160213	-860198	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	15675	-	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	26040	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	1264147	+	BC029653|ZFHX3|463|zinc finger homeobox 3##AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.0	
chr2	207424026	207424158	reg1020817.p1	6.792	+	AK129906 TSC_hg19_v1_chr2_+_207406857	-17256	+	TSC_hg19_v1_chr2_+_207308286 AB009672 NM_003812 BC132763 BC132765	-115759	+	TSC_hg19_v1_chr2_+_207139414 AK127271 NM_020923	-284625	+	NM_001102659	83049	+	DQ516347 NM_001093730	159027	-	AK292386 BC033509 BC088356 AK302250 AK309144 NM_001039845 AK308257	205938	-	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23##AB009672|ADAM23|8745|ADAM metallopeptidase domain 23##NM_003812|ADAM23|8745|ADAM metallopeptidase domain 23##BC132763|ADAM23|8745|ADAM metallopeptidase domain 23##BC132765|ADAM23|8745|ADAM metallopeptidase domain 23##AK127271|ZDBF2|57683|zinc finger, DBF-type containing 2##NM_020923|ZDBF2|57683|zinc finger, DBF-type containing 2##NM_001102659|LOC200726|200726|hCG1657980##DQ516347|DYTN|391475|dystrotelin##NM_001093730|DYTN|391475|dystrotelin##AK292386|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##BC033509|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##BC088356|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK302250|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK309144|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##NM_001039845|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK308257|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)	0.698263	CTCF.p2:20:0.698
chr3	172179447	172179604	reg1022927.p1	6.792	+	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	-13302	-	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-421188	+	TSC_hg19_v1_chr3_+_171757442 AY358367	-422067	+	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	61653	-	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	249365	-	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	288999	+	AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AY358367|FNDC3B|64778|fibronectin type III domain containing 3B##AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene	0.0	
chr4	75596435	75596538	reg1019911.p2	6.792	+	BC009799 M30704 NM_001657	-115858	+	BC009799 M30704 NM_001657	-285634	+	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	-365546	+	BC011618 S55606 AB109441 NM_001729	123297	-	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	261886	+	TSC_hg19_v1_chr4_-_76439504 AK309555 AK308754 AB528599 AF247041 CU689096 CU690404 GQ129342 GQ129343 GQ250944 GQ250945 GQ250946 JF691538 JF691539 AB209072 AF255666 AY888047 GU937000 AF305424	843030	-	BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK309555|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK308754|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF247041|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129342|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129343|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250944|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250945|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250946|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AB209072|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF255666|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AY888047|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GU937000|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF305424|RCHY1|25898|ring finger and CHY zinc finger domain containing 1	0.264431	CTCF.p2:10:0.264
chr5	133474112	133474275	reg1016563.p1	6.792	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	-22832	+	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	-23674	+	AK095989 NM_003374	-133370	-	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	38430	-	TSC_hg19_v1_chr5_-_133512642 Z47087 BC020798 NM_006930 NM_170679	38489	-	AB451240 AB451365 CR457417 AB385080 X12646 TSC_hg19_v1_chr5_-_133561733 J03804	87451	-	NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1##Z47087|SKP1|6500|S-phase kinase-associated protein 1##BC020798|SKP1|6500|S-phase kinase-associated protein 1##NM_006930|SKP1|6500|S-phase kinase-associated protein 1##NM_170679|SKP1|6500|S-phase kinase-associated protein 1##AB451240|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AB451365|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##CR457417|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##X12646|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##J03804|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme	0.0	
chr1	41414725	41414813	reg1021168.p1	6.791	+	BC035496 TSC_hg19_v1_chr1_-_41328020	-86749	-	TSC_hg19_v1_chr1_-_41328006 BC052559 NM_133467	-86760	-	TSC_hg19_v1_chr1_+_41284599 AK074957	-130152	+	TSC_hg19_v1_chr1_+_41444968 NM_001905	30218	+	TSC_hg19_v1_chr1_+_41445365 BC009408	30593	+	AK297386 TSC_hg19_v1_chr1_+_41445376	30611	+	BC035496|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##BC052559|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##NM_133467|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##AK074957|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_001905|CTPS|1503|CTP synthase##BC009408|CTPS|1503|CTP synthase##AK297386|CTPS|1503|CTP synthase	0.945238	CTCF.p2:9:0.945
chr14	31739522	31739645	reg1020002.p2	6.791	+	TSC_hg19_v1_chr14_-_31676920 BC016947	-62648	-	TSC_hg19_v1_chr14_-_31676690 NM_015382	-62898	-	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	-244013	-	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	150178	-	TSC_hg19_v1_chr14_-_31926633 BC010618 AK302829 AK055367 NM_080664	187092	-	GQ981321 GQ981322 NM_001197184	217567	-	NM_015382|HECTD1|25831|HECT domain containing 1##BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3##BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A##BC010618|C14orf126|112487|chromosome 14 open reading frame 126##AK055367|C14orf126|112487|chromosome 14 open reading frame 126##NM_080664|C14orf126|112487|chromosome 14 open reading frame 126##GQ981321|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##GQ981322|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##NM_001197184|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)	0.999182	CTCF.p2:-4:0.999
chr1	5953852	5953977	reg1021543.p2	6.791	+	AY282806 NM_001042478 NM_018836	-1238810	+	TSC_hg19_v1_chr1_+_4714668 AF175409	-1239185	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-2137069	-	NM_001199861	98443	+	TSC_hg19_v1_chr1_-_6052456 AY118228	98531	-	TSC_hg19_v1_chr1_-_6052507 AK124074 AK314326 AF537130 BC040520 NM_015102	98595	-	AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##AF175409|AJAP1|55966|adherens junctions associated protein 1##BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AY118228|NPHP4|261734|nephronophthisis 4##AK124074|NPHP4|261734|nephronophthisis 4##AK314326|NPHP4|261734|nephronophthisis 4##AF537130|NPHP4|261734|nephronophthisis 4##BC040520|NPHP4|261734|nephronophthisis 4##NM_015102|NPHP4|261734|nephronophthisis 4	0.830068	CTCF.p2:13:0.830
chr17	53719266	53719388	reg1022497.p1	6.791	+	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	-220072	-	TSC_hg19_v1_chr17_+_53344967 AK295726 AK074289	-374341	+	AK290043 TSC_hg19_v1_chr17_+_53343204	-376140	+	BC010128 AK001832 NM_018286	80822	-	AK095175 NM_001099640	90135	-	NM_021213 TSC_hg19_v1_chr17_+_53828339 AF087857 AF151638	109048	+	CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##AK295726|HLF|3131|hepatic leukemia factor##AK074289|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100##NM_021213|PCTP|58488|phosphatidylcholine transfer protein##AF087857|PCTP|58488|phosphatidylcholine transfer protein##AF151638|PCTP|58488|phosphatidylcholine transfer protein	0.921133	CTCF.p2:12:0.921
chr19	40333139	40333273	reg1020908.p1	6.791	+	BC019609 BC015218 TSC_hg19_v1_chr19_-_40331308 AB451384 BT006830 BT020144 CR457069	-1915	-	TSC_hg19_v1_chr19_-_40324779 AF205861 BC025291 AK074971 BC009688 AK302127 BC018751 NM_004714 NM_006483 NM_006484 Y17999	-8408	-	NM_001143832	-65973	+	AB463635 M59849 TSC_hg19_v1_chr19_-_40336992	3762	-	TSC_hg19_v1_chr19_-_40337007 BC019260 AK308649	3800	-	AK296950 TSC_hg19_v1_chr19_-_40337020 NM_001436	3829	-	BC019609|FBL|2091|fibrillarin##BC015218|FBL|2091|fibrillarin##AB451384|FBL|2091|fibrillarin##BT006830|FBL|2091|fibrillarin##BT020144|FBL|2091|fibrillarin##CR457069|FBL|2091|fibrillarin##AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_001143832|LEUTX|342900|leucine twenty homeobox##M59849|FBL|2091|fibrillarin##BC019260|FBL|2091|fibrillarin##AK308649|FBL|2091|fibrillarin##AK296950|FBL|2091|fibrillarin##NM_001436|FBL|2091|fibrillarin	0.015014	
chr20	21029600	21029696	reg1020622.p1	6.791	+	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	-336420	-	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	-680894	+	NM_001167816 AL117439	-992328	+	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	77016	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	77079	+	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	254327	+	DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1##BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2	0.996605	CTCF.p2:-6:0.997
chr6	142709492	142709610	reg1023258.p1	6.791	+	TSC_hg19_v1_chr6_+_142623443 BX640873	-86145	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-86482	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-198922	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	556777	-	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	672444	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	672485	+	BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1	0.854698	CTCF.p2:-2:0.855
chr9	23089249	23089340	reg1020267.p1	6.791	+	AJ290954 TSC_hg19_v1_chr9_+_22447458 AK130018	-641845	+	AB464510 TSC_hg19_v1_chr9_+_22447162	-642181	+	TSC_hg19_v1_chr9_+_22446846 AK096011 NM_022160 BC130435 BC130437	-642457	+	BC030692 NM_001171197	732183	-	TSC_hg19_v1_chr9_-_23821819 BC035004	732519	-	BC042393 NM_001171195 TSC_hg19_v1_chr9_-_23821847	732550	-	AJ290954|DMRTA1|63951|DMRT-like family A1##AK130018|DMRTA1|63951|DMRT-like family A1##AK096011|DMRTA1|63951|DMRT-like family A1##NM_022160|DMRTA1|63951|DMRT-like family A1##BC130435|DMRTA1|63951|DMRT-like family A1##BC130437|DMRTA1|63951|DMRT-like family A1##BC030692|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171197|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC035004|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##BC042393|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_001171195|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	0.917788	CTCF.p2:7:0.918
chr1	19596102	19596239	reg1021917.p2	6.790	+	TSC_hg19_v1_chr1_+_19578298 AK027569 AF173378 BC003013 BC006504 AK024227 AY303790 AK126387 AK295328	-17861	+	TSC_hg19_v1_chr1_+_19578084 NM_016183	-18106	+	BC034589 NM_015047 TSC_hg19_v1_chr1_-_19578046	-18124	-	CU693022 EU176235 EU176541 EU831806 EU831883 AJ271799 BC031562 BC042420 BC025709 AF040639 NM_012067	19071	-	BT007347 DQ891003 DQ894182 TSC_hg19_v1_chr1_-_19638564 BC004111 BC011586 BC013996 AK303131	42385	-	TSC_hg19_v1_chr1_-_19638596 AK310609	42420	-	AK027569|MRTO4|51154|mRNA turnover 4 homolog (S. cerevisiae)##AF173378|MRTO4|51154|mRNA turnover 4 homolog (S. cerevisiae)##BC003013|MRTO4|51154|mRNA turnover 4 homolog (S. cerevisiae)##BC006504|MRTO4|51154|mRNA turnover 4 homolog (S. cerevisiae)##AK024227|MRTO4|51154|mRNA turnover 4 homolog (S. cerevisiae)##AY303790|MRTO4|51154|mRNA turnover 4 homolog (S. cerevisiae)##AK295328|MRTO4|51154|mRNA turnover 4 homolog (S. cerevisiae)##NM_016183|MRTO4|51154|mRNA turnover 4 homolog (S. cerevisiae)##BC034589|KIAA0090|23065|KIAA0090##NM_015047|KIAA0090|23065|KIAA0090##EU176235|AKR7A3|22977|aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)##EU176541|AKR7A3|22977|aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)##EU831806|AKR7A3|22977|aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)##EU831883|AKR7A3|22977|aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)##AJ271799|AKR7A3|22977|aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)##BC031562|AKR7A3|22977|aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)##BC042420|AKR7A3|22977|aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)##BC025709|AKR7A3|22977|aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)##AF040639|AKR7A3|22977|aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)##NM_012067|AKR7A3|22977|aldo-keto reductase family 7, member A3 (aflatoxin aldehyde reductase)##BT007347|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##DQ891003|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##DQ894182|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC004111|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC011586|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC013996|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AK303131|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AK310609|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)	0.196307	
chr19	52140745	52140894	reg1023742.p1	6.790	+	DQ892433 AF170484 BC029896 AK225753 U71383 NM_003830	-7162	-	NM_007147 BC007778 AK292687 BC052997 D50419	-66272	+	U71382 BC140798 BC035359 AK300182 AK300170 AK308174 AK309903 D86358 D86359 NM_001177547 NM_001177548 NM_001177549 NM_001245 NM_198845 NM_198846	-105819	-	AY358369 AY854038 AK298284 NM_001098612	9250	-	NM_001523 U59269 BC035837 AM904814	86413	-	M60626 S49810 M60627 BC005315 NM_001193306 NM_002029 AK314935	114311	-	DQ892433|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AF170484|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##BC029896|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AK225753|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##U71383|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_003830|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_007147|ZNF175|7728|zinc finger protein 175##BC007778|ZNF175|7728|zinc finger protein 175##AK292687|ZNF175|7728|zinc finger protein 175##BC052997|ZNF175|7728|zinc finger protein 175##D50419|ZNF175|7728|zinc finger protein 175##U71382|SIGLEC6|946|sialic acid binding Ig-like lectin 6##BC140798|SIGLEC6|946|sialic acid binding Ig-like lectin 6##BC035359|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK300182|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK300170|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK308174|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK309903|SIGLEC6|946|sialic acid binding Ig-like lectin 6##D86358|SIGLEC6|946|sialic acid binding Ig-like lectin 6##D86359|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177547|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177548|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177549|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001245|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_198845|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_198846|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AY854038|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##AK298284|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##NM_001098612|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##NM_001523|HAS1|3036|hyaluronan synthase 1##U59269|HAS1|3036|hyaluronan synthase 1##BC035837|HAS1|3036|hyaluronan synthase 1##AM904814|HAS1|3036|hyaluronan synthase 1##M60626|FPR1|2357|formyl peptide receptor 1##S49810|FPR1|2357|formyl peptide receptor 1##M60627|FPR1|2357|formyl peptide receptor 1##BC005315|FPR1|2357|formyl peptide receptor 1##NM_001193306|FPR1|2357|formyl peptide receptor 1##NM_002029|FPR1|2357|formyl peptide receptor 1##AK314935|FPR1|2357|formyl peptide receptor 1	0.564254	CTCF.p2:0:0.564
chr7	104781691	104781835	reg1023672.p1	6.789	+	TSC_hg19_v1_chr7_+_104752313 AY222296 AY438698	-29385	+	TSC_hg19_v1_chr7_+_104681423 AY157990	-100349	+	TSC_hg19_v1_chr7_+_104654651 AY147037 NM_018682 NM_182931 BC053906 BC062583 BC009061 BC001296 BC142987 BC040004 AF519459 AK000940 BC040848	-126989	+	BC035214 TSC_hg19_v1_chr7_-_104909496 U88666 NM_182691	127720	-	TSC_hg19_v1_chr7_-_105029265 AB489157	247502	-	TSC_hg19_v1_chr7_-_105029346 NM_182692	247579	-	AY222296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY438698|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY157990|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY147037|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##NM_018682|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##NM_182931|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC053906|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC062583|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC009061|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC001296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC142987|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC040004|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AF519459|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AK000940|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC040848|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC035214|SRPK2|6733|SRSF protein kinase 2##U88666|SRPK2|6733|SRSF protein kinase 2##NM_182691|SRPK2|6733|SRSF protein kinase 2##NM_182692|SRPK2|6733|SRSF protein kinase 2	0.502868	CTCF.p2:-11:0.503
chr1	57269355	57269473	reg1021255.p1	6.788	+	TSC_hg19_v1_chr1_+_57110986 AK314011 NM_006252 U06454 BC069680 BC069740 BC069823 EF056019	-158512	+	TSC_hg19_v1_chr1_-_57045237 NM_003713	-224169	-	AK312439 TSC_hg19_v1_chr1_-_57045216	-224197	-	AK125198 NM_001004303 TSC_hg19_v1_chr1_-_57285379	15959	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	51094	+	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	162302	-	AK314011|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_006252|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##U06454|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069680|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069740|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069823|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##EF056019|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_003713|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK125198|C1orf168|199920|chromosome 1 open reading frame 168##NM_001004303|C1orf168|199920|chromosome 1 open reading frame 168##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide	0.354157	CTCF.p2:12:0.354
chr2	10168538	10168678	reg1021386.p1	6.788	+	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	-76758	+	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	-184988	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-397483	-	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	15184	+	NM_001177718 AK302880 TSC_hg19_v1_chr2_+_10184414	15801	+	AB463821 TSC_hg19_v1_chr2_+_10186406	17737	+	NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11##NM_001177718|KLF11|8462|Kruppel-like factor 11##AK302880|KLF11|8462|Kruppel-like factor 11	0.0	
chr2	135002323	135002453	reg1010786.p1	6.787	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-676350	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-823034	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-1462694	-	NM_002410 D17716 AF113921	9497	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	474168	-	AK125008 NM_138326 BC016018 BC107420 AB071418	593830	+	AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	0.517896	CTCF.p2:29:0.518
chr4	123573663	123573756	reg1020314.p1	6.787	+	CU688120 CU688122 DQ645417 BC069124 BC066258 BC066259 BC066260 BC066261 BC066262 NM_001207006 NM_021803 AF254069	-31521	-	AF532913 AY283686 AY523040 DQ231169 S77835 AB451325 AB451454 AB591003 CU688118 DQ861285 AF228636 BC066254 BC066255 BC066256 BC066257 BC070338 S77834 U25676 V00564 NM_000586 X01586	-196123	-	NM_001159285 NM_001159295 BC040229 AK093297 AX748040	-273077	+	AK123553 NM_001178007 NM_152618 BC055426 TSC_hg19_v1_chr4_+_123653916 BX538148	80196	+	TSC_hg19_v1_chr4_+_123747833 J04513 NM_002006 BC111737 BC118573 BC118654	174135	+	TSC_hg19_v1_chr4_+_123747985 M27968	174257	+	DQ645417|IL21|59067|interleukin 21##BC069124|IL21|59067|interleukin 21##BC066258|IL21|59067|interleukin 21##BC066259|IL21|59067|interleukin 21##BC066260|IL21|59067|interleukin 21##BC066261|IL21|59067|interleukin 21##BC066262|IL21|59067|interleukin 21##NM_001207006|IL21|59067|interleukin 21##NM_021803|IL21|59067|interleukin 21##AF254069|IL21|59067|interleukin 21##AF532913|IL2|3558|interleukin 2##AY283686|IL2|3558|interleukin 2##AY523040|IL2|3558|interleukin 2##DQ231169|IL2|3558|interleukin 2##S77835|IL2|3558|interleukin 2##AB451325|IL2|3558|interleukin 2##AB451454|IL2|3558|interleukin 2##DQ861285|IL2|3558|interleukin 2##AF228636|IL2|3558|interleukin 2##BC066254|IL2|3558|interleukin 2##BC066255|IL2|3558|interleukin 2##BC066256|IL2|3558|interleukin 2##BC066257|IL2|3558|interleukin 2##BC070338|IL2|3558|interleukin 2##S77834|IL2|3558|interleukin 2##U25676|IL2|3558|interleukin 2##V00564|IL2|3558|interleukin 2##NM_000586|IL2|3558|interleukin 2##X01586|IL2|3558|interleukin 2##NM_001159285|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##NM_001159295|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##BC040229|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK093297|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK123553|BBS12|166379|Bardet-Biedl syndrome 12##NM_001178007|BBS12|166379|Bardet-Biedl syndrome 12##NM_152618|BBS12|166379|Bardet-Biedl syndrome 12##BC055426|BBS12|166379|Bardet-Biedl syndrome 12##BX538148|BBS12|166379|Bardet-Biedl syndrome 12##J04513|FGF2|2247|fibroblast growth factor 2 (basic)##NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)##BC111737|FGF2|2247|fibroblast growth factor 2 (basic)##M27968|FGF2|2247|fibroblast growth factor 2 (basic)	0.977279	CTCF.p2:21:0.977
chr6	107136199	107136310	reg1021270.p1	6.787	+	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	-58757	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	-58974	-	TSC_hg19_v1_chr6_+_106960443 U83115	-175843	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	213218	+	BC131628 NM_001080450	299381	-	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	644476	-	NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##U83115|AIM1|202|absent in melanoma 1##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2	0.740428	CTCF.p2:1:0.740
chr9	33375051	33375165	reg1019085.p1	6.787	+	TSC_hg19_v1_chr9_+_33290543 AK225750 BC012151 AB385216 DQ893676 DQ895843	-84555	+	NM_002504 NM_147133 NM_147134 TSC_hg19_v1_chr9_+_33290509 AF332009 AK291643 AL832342	-84634	+	TSC_hg19_v1_chr9_+_33265046 BC006974 BC020796 AF132968 AF161525 AB528724 CU675479 DQ893179 DQ896479 DQ896480	-110049	+	AK310456 TSC_hg19_v1_chr9_-_33395273	20161	-	AK294028 TSC_hg19_v1_chr9_-_33402480 AK297885	27370	-	BC062701 BC119672 BC119673 AB006190 NM_001170 TSC_hg19_v1_chr9_-_33402526	27407	-	AK225750|NFX1|4799|nuclear transcription factor, X-box binding 1##BC012151|NFX1|4799|nuclear transcription factor, X-box binding 1##DQ893676|NFX1|4799|nuclear transcription factor, X-box binding 1##DQ895843|NFX1|4799|nuclear transcription factor, X-box binding 1##NM_002504|NFX1|4799|nuclear transcription factor, X-box binding 1##NM_147133|NFX1|4799|nuclear transcription factor, X-box binding 1##NM_147134|NFX1|4799|nuclear transcription factor, X-box binding 1##AF332009|NFX1|4799|nuclear transcription factor, X-box binding 1##AK291643|NFX1|4799|nuclear transcription factor, X-box binding 1##AL832342|NFX1|4799|nuclear transcription factor, X-box binding 1##BC006974|CHMP5|51510|charged multivesicular body protein 5##BC020796|CHMP5|51510|charged multivesicular body protein 5##AF132968|CHMP5|51510|charged multivesicular body protein 5##AF161525|CHMP5|51510|charged multivesicular body protein 5##DQ893179|CHMP5|51510|charged multivesicular body protein 5##DQ896479|CHMP5|51510|charged multivesicular body protein 5##DQ896480|CHMP5|51510|charged multivesicular body protein 5##AK310456|AQP7|364|aquaporin 7##AK294028|AQP7|364|aquaporin 7##AK297885|AQP7|364|aquaporin 7##BC062701|AQP7|364|aquaporin 7##BC119672|AQP7|364|aquaporin 7##BC119673|AQP7|364|aquaporin 7##AB006190|AQP7|364|aquaporin 7##NM_001170|AQP7|364|aquaporin 7	0.950391	CTCF.p2:-16:0.950
chr3	31286995	31287175	reg1021567.p2	6.786	+	AL832766 NM_207359	-350933	-	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-638682	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-639063	+	TSC_hg19_v1_chr3_+_31574119 AK311488	287045	+	TSC_hg19_v1_chr3_+_31574468 AK074587	287364	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	287397	+	AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.0	
chr8	97345499	97345616	reg1020559.p1	6.786	+	TSC_hg19_v1_chr8_+_97274158 BC004192 BC004390 D14694 NM_014754 DQ891825 DQ895012 CU678608	-71345	+	TSC_hg19_v1_chr8_+_97274141 BC002376	-71418	+	TSC_hg19_v1_chr8_+_97274125 AK293036	-71439	+	TSC_hg19_v1_chr8_+_97505878 NM_002998	160321	+	BC030133 TSC_hg19_v1_chr8_+_97505928 J04621	160355	+	TSC_hg19_v1_chr8_+_97506040 AK025488 AK097839 AK130131 AK298643 AK300067	160478	+	BC004192|PTDSS1|9791|phosphatidylserine synthase 1##BC004390|PTDSS1|9791|phosphatidylserine synthase 1##D14694|PTDSS1|9791|phosphatidylserine synthase 1##NM_014754|PTDSS1|9791|phosphatidylserine synthase 1##DQ891825|PTDSS1|9791|phosphatidylserine synthase 1##DQ895012|PTDSS1|9791|phosphatidylserine synthase 1##BC002376|PTDSS1|9791|phosphatidylserine synthase 1##AK293036|PTDSS1|9791|phosphatidylserine synthase 1##NM_002998|SDC2|6383|syndecan 2##BC030133|SDC2|6383|syndecan 2##J04621|SDC2|6383|syndecan 2##AK025488|SDC2|6383|syndecan 2##AK097839|SDC2|6383|syndecan 2##AK130131|SDC2|6383|syndecan 2##AK298643|SDC2|6383|syndecan 2##AK300067|SDC2|6383|syndecan 2	0.341275	CTCF.p2:8:0.341
chr7	142551760	142551871	reg1019721.p1	6.785	+	M12426 TSC_hg19_v1_chr7_+_142495248	-56620	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	-94489	+	NM_001190487	-177685	+	TSC_hg19_v1_chr7_+_142552837 NM_004445 D83492 BC015495 BC051028 BC056159	910	+	TSC_hg19_v1_chr7_+_142560518 BC110606 BC110607	8700	+	AF304463 AF365928 AJ243500 AJ243501 AF365927 AK291707 NM_018646 AJ487964	31568	-	NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_004445|EPHB6|2051|EPH receptor B6##D83492|EPHB6|2051|EPH receptor B6##BC015495|EPHB6|2051|EPH receptor B6##BC051028|EPHB6|2051|EPH receptor B6##BC056159|EPHB6|2051|EPH receptor B6##BC110606|EPHB6|2051|EPH receptor B6##BC110607|EPHB6|2051|EPH receptor B6##AF304463|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AF365928|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AJ243500|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AJ243501|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AF365927|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AK291707|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##NM_018646|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AJ487964|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6	0.978186	CTCF.p2:-6:0.978
chr17	72433943	72434070	reg1020612.p2	6.784	+	AJ276102 NM_018653	-4171	+	AK075397 AF207989 AK222909 TSC_hg19_v1_chr17_+_72428254 AK000249	-5751	+	BC110848 BC004925 BC069202 NM_022036 BC125080 BC125081	-6402	+	TSC_hg19_v1_chr17_+_72439191 AK126429	5199	+	NM_007261 AJ224864 BC032352	28532	+	AF020314 TSC_hg19_v1_chr17_+_72462772	28764	+	AJ276102|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_018653|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC110848|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC004925|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC069202|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_022036|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125080|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125081|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK126429|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_007261|CD300A|11314|CD300a molecule##AJ224864|CD300A|11314|CD300a molecule##BC032352|CD300A|11314|CD300a molecule##AF020314|CD300A|11314|CD300a molecule	0.060452	
chr18	54231008	54231118	reg1021656.p1	6.784	+	AB527692 BC031056 NM_001243226	-927905	-	AK315074 AK299169 NM_001243227 NM_001243228	-974025	-	FR748206 FR748216 TSC_hg19_v1_chr18_-_53255849 AK122765 NM_001083962 NM_001243230 NM_003199	-975266	-	AB209263 DQ891846 DQ895034 EU176640 TSC_hg19_v1_chr18_-_54305824 AF051896 AF052659 AK313653	74684	-	TSC_hg19_v1_chr18_-_54305956 BC001156 AF003938 NM_004786	74851	-	TSC_hg19_v1_chr18_+_54318593 AK057141 NM_015285 NM_052834 AB011113 BC150282	87543	+	BC031056|TCF4|6925|transcription factor 4##NM_001243226|TCF4|6925|transcription factor 4##AK315074|TCF4|6925|transcription factor 4##AK299169|TCF4|6925|transcription factor 4##NM_001243227|TCF4|6925|transcription factor 4##NM_001243228|TCF4|6925|transcription factor 4##FR748216|TCF4|6925|transcription factor 4##AK122765|TCF4|6925|transcription factor 4##NM_001083962|TCF4|6925|transcription factor 4##NM_001243230|TCF4|6925|transcription factor 4##NM_003199|TCF4|6925|transcription factor 4##AB209263|TXNL1|9352|thioredoxin-like 1##DQ891846|TXNL1|9352|thioredoxin-like 1##DQ895034|TXNL1|9352|thioredoxin-like 1##EU176640|TXNL1|9352|thioredoxin-like 1##AF051896|TXNL1|9352|thioredoxin-like 1##AF052659|TXNL1|9352|thioredoxin-like 1##AK313653|TXNL1|9352|thioredoxin-like 1##BC001156|TXNL1|9352|thioredoxin-like 1##AF003938|TXNL1|9352|thioredoxin-like 1##NM_004786|TXNL1|9352|thioredoxin-like 1##AK057141|WDR7|23335|WD repeat domain 7##NM_015285|WDR7|23335|WD repeat domain 7##NM_052834|WDR7|23335|WD repeat domain 7##AB011113|WDR7|23335|WD repeat domain 7##BC150282|WDR7|23335|WD repeat domain 7	0.938674	CTCF.p2:-7:0.928
chr7	149366400	149366544	reg1020163.p1	6.784	+	TSC_hg19_v1_chr7_-_149321856 BC047675	-44618	-	AB590454 AK295771 TSC_hg19_v1_chr7_-_149321793 AK022762	-44730	-	TSC_hg19_v1_chr7_-_149194899 NM_001163474 NM_152557 AK128244	-171574	-	TSC_hg19_v1_chr7_+_149412043 BC142722 BC146667 AB058765 BC150330 BC152409 NM_032534	45615	+	BC052625 NM_207336 BC038972	103828	-	NM_198455	106658	+	BC047675|ZNF767|79970|zinc finger family member 767##AK295771|ZNF767|79970|zinc finger family member 767##AK022762|ZNF767|79970|zinc finger family member 767##NM_001163474|ZNF746|155061|zinc finger protein 746##NM_152557|ZNF746|155061|zinc finger protein 746##AK128244|ZNF746|155061|zinc finger protein 746##BC142722|KRBA1|84626|KRAB-A domain containing 1##BC146667|KRBA1|84626|KRAB-A domain containing 1##AB058765|KRBA1|84626|KRAB-A domain containing 1##BC150330|KRBA1|84626|KRAB-A domain containing 1##BC152409|KRBA1|84626|KRAB-A domain containing 1##NM_032534|KRBA1|84626|KRAB-A domain containing 1##BC052625|ZNF467|168544|zinc finger protein 467##NM_207336|ZNF467|168544|zinc finger protein 467##BC038972|ZNF467|168544|zinc finger protein 467##NM_198455|SSPO|23145|SCO-spondin homolog (Bos taurus)	0.22341	CTCF.p2:-4:0.223
chr7	22335737	22335854	reg1018872.p2	6.784	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-350313	-	AJ320497 NM_003777	-752963	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-867471	+	AL833195 NM_012294	60726	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	204052	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	431028	+	AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)	0.039205	
chr13	63119210	63119330	reg1020371.p2	6.783	+	AK289924 NM_022843	-1129616	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-1130017	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-2147791	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	4685234	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	7563271	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	9320989	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.923049	CTCF.p2:-5:0.923
chr18	68159111	68159249	reg1020414.p1	6.783	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-202919	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-203013	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-286242	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	2051595	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	2052550	-	AF448839 NM_138999	2373753	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.999767	CTCF.p2:-10:1.000
chr16	87622491	87622596	reg1021747.p1	6.782	+	AB011151 AB384500 NM_015144 AB030243 BC101478	-97153	-	TSC_hg19_v1_chr16_+_87425998 AF303888 AM393561 DQ893152 DQ896448 AB528176 AL834298	-196529	+	TSC_hg19_v1_chr16_+_87425947 AK025556 BC067797 BC018634	-196580	+	AB593088 TSC_hg19_v1_chr16_+_87636492 NM_020655 BC036533	13958	+	TSC_hg19_v1_chr16_+_87636574 AB042636	14035	+	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	14167	+	AB011151|ZCCHC14|23174|zinc finger, CCHC domain containing 14##NM_015144|ZCCHC14|23174|zinc finger, CCHC domain containing 14##AB030243|ZCCHC14|23174|zinc finger, CCHC domain containing 14##BC101478|ZCCHC14|23174|zinc finger, CCHC domain containing 14##AF303888|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AM393561|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ893152|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ896448|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AL834298|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK025556|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC067797|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC018634|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##NM_020655|JPH3|57338|junctophilin 3##BC036533|JPH3|57338|junctophilin 3##AB042636|JPH3|57338|junctophilin 3##DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3	0.123307	
chr20	45381416	45381539	reg1022025.p1	6.782	+	AF248053 TSC_hg19_v1_chr20_+_45338287 AK055548 NM_030777 BC101657 BC113423 AK290961 AK315269 AF321240	-43240	+	TSC_hg19_v1_chr20_-_45318164 BC009727 AB017505 AB065434 NM_033550	-63256	-	TSC_hg19_v1_chr20_-_45318084 BC010637 BC035461 AB587589 AK096502 BC066309 BC019621 AK315182	-63510	-	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	141805	+	TSC_hg19_v1_chr20_+_45523505 BC008803	142031	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	142075	+	AF248053|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK055548|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##NM_030777|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC101657|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC113423|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK290961|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK315269|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AF321240|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC009727|TP53RK|112858|TP53 regulating kinase##AB017505|TP53RK|112858|TP53 regulating kinase##AB065434|TP53RK|112858|TP53 regulating kinase##NM_033550|TP53RK|112858|TP53 regulating kinase##BC010637|TP53RK|112858|TP53 regulating kinase##BC035461|TP53RK|112858|TP53 regulating kinase##AK096502|TP53RK|112858|TP53 regulating kinase##BC066309|TP53RK|112858|TP53 regulating kinase##BC019621|TP53RK|112858|TP53 regulating kinase##AK315182|TP53RK|112858|TP53 regulating kinase##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)	0.011065	
chr2	98774132	98774233	reg1021667.p1	6.782	+	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	-70536	+	TSC_hg19_v1_chr2_-_98612395 AK098792	-161779	-	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	-161996	-	DQ426863 NM_001079878 NM_001298 DQ067460	188451	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	188723	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	287176	+	NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B##AK098792|TMEM131|23505|transmembrane protein 131##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa	0.225679	CTCF.p2:16:0.226
chr12	98110249	98110396	reg1019920.p1	6.781	+	BC027605 NM_001135175	-809079	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-809291	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-1316005	-	TSC_hg19_v1_chr12_-_98897622 AK126817	787305	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	799045	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	799085	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.778247	CTCF.p2:6:0.778
chr7	63643632	63643724	reg1021061.p1	6.781	+	NM_001159522	-137858	+	AK131575 NM_001159279	-6133796	+	AF277624 NM_033273	-6436108	-	NM_001159524	23902	+	BC033523 NM_153363	45173	+	NM_001170905	129507	+	NM_001159522|ZNF727|442319|zinc finger protein 727##AK131575|ZNF716|441234|zinc finger protein 716##NM_001159279|ZNF716|441234|zinc finger protein 716##AF277624|ZNF479|90827|zinc finger protein 479##NM_033273|ZNF479|90827|zinc finger protein 479##NM_001159524|ZNF735|730291|zinc finger protein 735##BC033523|ZNF679|168417|zinc finger protein 679##NM_153363|ZNF679|168417|zinc finger protein 679##NM_001170905|ZNF736|728927|zinc finger protein 736	0.968409	CTCF.p2:-1:0.953
chr1	153201888	153202015	reg1020911.p2	6.780	+	NM_001195571	-11892	+	NM_001010857 BC130507 BC130511 BC087854	-26010	+	BC130455 BC133041 NM_001014291	-78525	-	BC108290 NM_000427	30227	+	BC128114 BC128115 BC069741 BC069798 BC069801 AY035376 NM_052891	81228	-	AY035377 NM_020393 AF242518	119081	-	NM_001195571|PRR9|574414|proline rich 9##NM_001010857|LELP1|149018|late cornified envelope-like proline-rich 1##BC130507|LELP1|149018|late cornified envelope-like proline-rich 1##BC130511|LELP1|149018|late cornified envelope-like proline-rich 1##BC087854|LELP1|149018|late cornified envelope-like proline-rich 1##BC130455|SPRR2G|6706|small proline-rich protein 2G##BC133041|SPRR2G|6706|small proline-rich protein 2G##NM_001014291|SPRR2G|6706|small proline-rich protein 2G##BC108290|LOR|4014|loricrin##NM_000427|LOR|4014|loricrin##BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3##BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3##NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035377|PGLYRP4|57115|peptidoglycan recognition protein 4##NM_020393|PGLYRP4|57115|peptidoglycan recognition protein 4##AF242518|PGLYRP4|57115|peptidoglycan recognition protein 4	0.99838	CTCF.p2:-14:0.998
chr18	27860954	27861100	reg1022954.p1	6.780	+	TSC_hg19_v1_chr18_-_25757363 NM_001792	-2103630	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	-2103990	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-3095794	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	761675	-	CR749226 TSC_hg19_v1_chr18_-_28681542	820461	-	TSC_hg19_v1_chr18_-_28682275 EF017811 EF017812 X56807 AK297029 AK290313 BX648425 BC063291 NM_004949 NM_024422	821164	-	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3##CR749226|DSC2|1824|desmocollin 2##EF017811|DSC2|1824|desmocollin 2##EF017812|DSC2|1824|desmocollin 2##X56807|DSC2|1824|desmocollin 2##AK297029|DSC2|1824|desmocollin 2##AK290313|DSC2|1824|desmocollin 2##BX648425|DSC2|1824|desmocollin 2##BC063291|DSC2|1824|desmocollin 2##NM_004949|DSC2|1824|desmocollin 2##NM_024422|DSC2|1824|desmocollin 2	0.986414	CTCF.p2:1:0.986
chr19	28733351	28733494	reg1022346.p1	6.780	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-448494	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-448589	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-449034	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	970638	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	970699	-	NM_001146339	1284068	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.364576	CTCF.p2:-2:0.365
chr20	30743571	30743687	reg1020471.p2	6.780	+	TSC_hg19_v1_chr20_+_30697532 AK126534 AK294980 AK296500 AK302439 BC021107 D87444	-46088	+	TSC_hg19_v1_chr20_+_30697308 NM_014742	-46260	+	TSC_hg19_v1_chr20_+_30640055 NM_001172129 NM_001172130 NM_001172131 NM_001172132 NM_001172133 NM_002110 AK289896 AK225819 AK290928 AK298726 AK026432 BC108930 BC108931 BC113854 BC114463 AK314335 BC073748 BC094847 BC014435	-103583	+	TSC_hg19_v1_chr20_-_30795547 AK292450 BC000197 D83784 AF006005 BC023655 NM_002657	51846	-	TSC_hg19_v1_chr20_+_30795686 AK291033 AF375884 AK300810 AK303068 BC000582 NM_015352 NM_172236	52006	+	D80002 TSC_hg19_v1_chr20_+_30795698	52069	+	AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4##BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4##D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4##NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4##NM_001172129|HCK|3055|hemopoietic cell kinase##NM_001172130|HCK|3055|hemopoietic cell kinase##NM_001172131|HCK|3055|hemopoietic cell kinase##NM_001172132|HCK|3055|hemopoietic cell kinase##NM_001172133|HCK|3055|hemopoietic cell kinase##NM_002110|HCK|3055|hemopoietic cell kinase##AK289896|HCK|3055|hemopoietic cell kinase##AK225819|HCK|3055|hemopoietic cell kinase##AK290928|HCK|3055|hemopoietic cell kinase##AK298726|HCK|3055|hemopoietic cell kinase##AK026432|HCK|3055|hemopoietic cell kinase##BC108930|HCK|3055|hemopoietic cell kinase##BC108931|HCK|3055|hemopoietic cell kinase##BC113854|HCK|3055|hemopoietic cell kinase##BC114463|HCK|3055|hemopoietic cell kinase##AK314335|HCK|3055|hemopoietic cell kinase##BC073748|HCK|3055|hemopoietic cell kinase##BC094847|HCK|3055|hemopoietic cell kinase##BC014435|HCK|3055|hemopoietic cell kinase##AK292450|PLAGL2|5326|pleiomorphic adenoma gene-like 2##D83784|PLAGL2|5326|pleiomorphic adenoma gene-like 2##AF006005|PLAGL2|5326|pleiomorphic adenoma gene-like 2##BC023655|PLAGL2|5326|pleiomorphic adenoma gene-like 2##NM_002657|PLAGL2|5326|pleiomorphic adenoma gene-like 2##AK291033|POFUT1|23509|protein O-fucosyltransferase 1##AF375884|POFUT1|23509|protein O-fucosyltransferase 1##AK300810|POFUT1|23509|protein O-fucosyltransferase 1##AK303068|POFUT1|23509|protein O-fucosyltransferase 1##BC000582|POFUT1|23509|protein O-fucosyltransferase 1##NM_015352|POFUT1|23509|protein O-fucosyltransferase 1##NM_172236|POFUT1|23509|protein O-fucosyltransferase 1##D80002|POFUT1|23509|protein O-fucosyltransferase 1	0.54335	CTCF.p2:-13:0.464
chr2	201983360	201983495	reg1018538.p2	6.780	+	AF015450 NM_001127183 AK308767 TSC_hg19_v1_chr2_+_201983395	-96	+	AF009616 TSC_hg19_v1_chr2_+_201981056 AF010127 U97074 AK315924 BC001602 AB209600	-2386	+	TSC_hg19_v1_chr2_+_201980874 AK296036 NM_001127184 NM_001202516 NM_001202517 NM_001202519 NM_003879 AK297387 AF005774	-2532	+	TSC_hg19_v1_chr2_+_201983419 AK289913 AK315208	45	+	NM_001202518 AK304585 AF041462	14295	+	AF041459 NM_001202515	21570	+	AF015450|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001127183|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK308767|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF009616|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF010127|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##U97074|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK315924|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##BC001602|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AB209600|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK296036|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001127184|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202516|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202517|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202519|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_003879|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK297387|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF005774|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK289913|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK315208|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202518|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK304585|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF041462|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF041459|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202515|CFLAR|8837|CASP8 and FADD-like apoptosis regulator	0.143995	
chr4	143641413	143641560	reg1024265.p1	6.780	+	AK290619 NM_000585 NM_172175 BC018149 U14407	-1083720	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-1499400	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-1499431	+	NM_001101669 NM_003866	126117	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	464578	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	464639	+	AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38	0.960656	CTCF.p2:18:0.961
chr7	129042236	129042374	reg1021291.p1	6.780	+	AK316073 NM_001130722	-26822	+	TSC_hg19_v1_chr7_+_129008062 AK025372	-34217	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	-34319	+	TSC_hg19_v1_chr7_+_129074283 NM_001134336 NM_020704 AK290165 BC019064 AB032996 CU676366 AB463039 AM392619 AM392944 AM392960 AM393447	31968	+	BC050400 NM_001195243 BC035417	100059	+	TSC_hg19_v1_chr7_-_129251474 AK123679	209173	-	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001134336|FAM40B|57464|family with sequence similarity 40, member B##NM_020704|FAM40B|57464|family with sequence similarity 40, member B##AK290165|FAM40B|57464|family with sequence similarity 40, member B##BC019064|FAM40B|57464|family with sequence similarity 40, member B##AB032996|FAM40B|57464|family with sequence similarity 40, member B##AM392619|FAM40B|57464|family with sequence similarity 40, member B##AM392944|FAM40B|57464|family with sequence similarity 40, member B##AM392960|FAM40B|57464|family with sequence similarity 40, member B##AM393447|FAM40B|57464|family with sequence similarity 40, member B##BC050400|LOC100287482|100287482|uncharacterized LOC100287482##NM_001195243|LOC100287482|100287482|uncharacterized LOC100287482##BC035417|LOC100287482|100287482|uncharacterized LOC100287482	0.78915	CTCF.p2:0:0.789
chr10	123646657	123646772	reg1021203.p1	6.779	+	X52832 U11814 M87770 M87772 AB030073 AB030074 AB030075 AB030076 AB030077 AB030078 M80634 M87771 TSC_hg19_v1_chr10_-_123357946 M35718 M97193 BC096749 AK026508 BC039243 NM_000141 NM_001144917 NM_001144918 NM_001144919 NM_022970	-288956	-	AK294026 NM_001144915	-290556	-	AK308621 NM_001144916	-292943	-	TSC_hg19_v1_chr10_-_123687547 AK296356 AF079098 AF079099 AK303604 AK313057 BC022026 NM_001001976 NM_007041	40811	-	TSC_hg19_v1_chr10_-_123687979 AK299101 AK308926	41286	-	TSC_hg19_v1_chr10_-_123734310 AK301658 AK056579	87600	-	X52832|FGFR2|2263|fibroblast growth factor receptor 2##U11814|FGFR2|2263|fibroblast growth factor receptor 2##M87770|FGFR2|2263|fibroblast growth factor receptor 2##M87772|FGFR2|2263|fibroblast growth factor receptor 2##AB030073|FGFR2|2263|fibroblast growth factor receptor 2##AB030074|FGFR2|2263|fibroblast growth factor receptor 2##AB030075|FGFR2|2263|fibroblast growth factor receptor 2##AB030076|FGFR2|2263|fibroblast growth factor receptor 2##AB030077|FGFR2|2263|fibroblast growth factor receptor 2##AB030078|FGFR2|2263|fibroblast growth factor receptor 2##M80634|FGFR2|2263|fibroblast growth factor receptor 2##M87771|FGFR2|2263|fibroblast growth factor receptor 2##M97193|FGFR2|2263|fibroblast growth factor receptor 2##BC096749|FGFR2|2263|fibroblast growth factor receptor 2##AK026508|FGFR2|2263|fibroblast growth factor receptor 2##BC039243|FGFR2|2263|fibroblast growth factor receptor 2##NM_000141|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144917|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144918|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144919|FGFR2|2263|fibroblast growth factor receptor 2##NM_022970|FGFR2|2263|fibroblast growth factor receptor 2##AK294026|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2##AK308621|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144916|FGFR2|2263|fibroblast growth factor receptor 2##AK296356|ATE1|11101|arginyltransferase 1##AF079098|ATE1|11101|arginyltransferase 1##AF079099|ATE1|11101|arginyltransferase 1##AK303604|ATE1|11101|arginyltransferase 1##AK313057|ATE1|11101|arginyltransferase 1##BC022026|ATE1|11101|arginyltransferase 1##NM_001001976|ATE1|11101|arginyltransferase 1##NM_007041|ATE1|11101|arginyltransferase 1##AK299101|ATE1|11101|arginyltransferase 1##AK308926|ATE1|11101|arginyltransferase 1##AK301658|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##AK056579|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	0.995693	CTCF.p2:-6:0.969
chr12	84897095	84897200	reg1019100.p2	6.779	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	-1815886	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	-1816230	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	-1816447	+	AK291207 AK022853 TSC_hg19_v1_chr12_-_85306547	409396	-	TSC_hg19_v1_chr12_-_85306575 BC022253 BC070040	409425	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	409445	-	AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK291207|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK022853|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC022253|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC070040|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15	1.097212	CTCF.p2:0:0.981
chr10	22875282	22875399	reg1019536.p2	6.778	+	TSC_hg19_v1_chr10_+_22726003 AK295718	-149341	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-240884	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-265175	+	AK294817 TSC_hg19_v1_chr10_-_23003038	127697	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	128150	-	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	341641	+	AK295718|LOC100289455|100289455|uncharacterized LOC100289455##NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3	0.0	
chr20	40326543	40326676	reg1024216.p1	6.778	+	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-79548	-	AB089149 NM_052846	-331112	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	-357094	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	1491901	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	1759883	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	1759994	+	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3##AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6	0.961402	CTCF.p2:6:0.961
chr3	144489780	144489875	reg1021576.p1	6.778	+	NM_001134470 AK294020	-797610	+	TSC_hg19_v1_chr3_+_143690915 BC037293	-798837	+	NM_173552 AK315082	-799175	+	AB527423 U84573 AK295084 TSC_hg19_v1_chr3_-_145878818	1388980	-	TSC_hg19_v1_chr3_-_145878972 BC037169 AB209879	1389129	-	TSC_hg19_v1_chr3_-_145879223 NM_000935 NM_182943	1389424	-	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58##AK294020|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##U84573|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AK295084|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##BC037169|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AB209879|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_000935|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_182943|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2	0.834729	CTCF.p2:20:0.835
chr3	9769038	9769139	reg1019276.p2	6.778	+	BC035735 NM_153635 TSC_hg19_v1_chr3_+_9745516 BC130375	-23515	+	TSC_hg19_v1_chr3_+_9691198 BC035690 BC001674 AB463135 AM393050 AM393309 EU832316 EU832401 CU690748 DQ630520	-77856	+	TSC_hg19_v1_chr3_+_9691188 AK295891 BC050626 AK298846 AL713695	-77899	+	TSC_hg19_v1_chr3_+_9773414 AK293865	4317	+	TSC_hg19_v1_chr3_+_9773428 BC068262 BC036374 NM_001003694 NM_004634	4342	+	BC053851 TSC_hg19_v1_chr3_+_9773449	4362	+	BC035735|CPNE9|151835|copine family member IX##NM_153635|CPNE9|151835|copine family member IX##BC130375|CPNE9|151835|copine family member IX##BC035690|MTMR14|64419|myotubularin related protein 14##BC001674|MTMR14|64419|myotubularin related protein 14##EU832316|MTMR14|64419|myotubularin related protein 14##EU832401|MTMR14|64419|myotubularin related protein 14##DQ630520|MTMR14|64419|myotubularin related protein 14##AK295891|MTMR14|64419|myotubularin related protein 14##BC050626|MTMR14|64419|myotubularin related protein 14##AK298846|MTMR14|64419|myotubularin related protein 14##AL713695|MTMR14|64419|myotubularin related protein 14##AK293865|BRPF1|7862|bromodomain and PHD finger containing, 1##BC068262|BRPF1|7862|bromodomain and PHD finger containing, 1##BC036374|BRPF1|7862|bromodomain and PHD finger containing, 1##NM_001003694|BRPF1|7862|bromodomain and PHD finger containing, 1##NM_004634|BRPF1|7862|bromodomain and PHD finger containing, 1##BC053851|BRPF1|7862|bromodomain and PHD finger containing, 1	0.993838	CTCF.p2:7:0.994
chr7	101915431	101915611	reg1000152.p1	6.778	+	M74099 NM_181552	-454640	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-456312	+	BC002778 NM_138403	-642946	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	12876	+	TSC_hg19_v1_chr7_+_101928431 AB000520	12922	+	NM_001146210	81367	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.084084	
chrX	118754148	118754263	reg1020898.p2	6.778	+	BC047878 BC068514 BC040379 AY208891 NM_001173487 NM_017544	-14377	-	EF165090 EF165091 EF165093 AJ011812 EF158333 EF216688 EF216689 NM_001173488	-27223	-	BC042021 NM_181777	-39908	+	D50918 AB384441 CU679289 CU680116 CU690318 TSC_hg19_v1_chrX_-_118827108 BC069231	72880	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	72927	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	72974	-	BC047878|NKRF|55922|NFKB repressing factor##BC068514|NKRF|55922|NFKB repressing factor##BC040379|NKRF|55922|NFKB repressing factor##AY208891|NKRF|55922|NFKB repressing factor##NM_001173487|NKRF|55922|NFKB repressing factor##NM_017544|NKRF|55922|NFKB repressing factor##EF165090|NKRF|55922|NFKB repressing factor##EF165091|NKRF|55922|NFKB repressing factor##EF165093|NKRF|55922|NFKB repressing factor##AJ011812|NKRF|55922|NFKB repressing factor##EF158333|NKRF|55922|NFKB repressing factor##EF216688|NKRF|55922|NFKB repressing factor##EF216689|NKRF|55922|NFKB repressing factor##NM_001173488|NKRF|55922|NFKB repressing factor##BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D50918|SEPT6|23157|septin 6##BC069231|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6	0.812848	CTCF.p2:7:0.813
chr10	21147381	21147508	reg1016899.p1	6.777	+	TSC_hg19_v1_chr10_+_20105360 AK304591 AY358486 NM_032812	-1042071	+	TSC_hg19_v1_chr10_+_18948359 NM_178815 BC024163 AK027275 AF494061 DQ893166 DQ896464	-2199023	+	BC033534 TSC_hg19_v1_chr10_-_18948215	-2199247	-	NM_006393 Y16241	39086	-	BC140744 BC144447 NM_001010896 NM_001177483	288043	-	AB209311 TSC_hg19_v1_chr10_-_21462987	315543	-	AK304591|PLXDC2|84898|plexin domain containing 2##AY358486|PLXDC2|84898|plexin domain containing 2##NM_032812|PLXDC2|84898|plexin domain containing 2##NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B##BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B##AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B##AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B##NM_006393|NEBL|10529|nebulette##Y16241|NEBL|10529|nebulette##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113##AB209311|NEBL|10529|nebulette	0.96861	CTCF.p2:-35:0.969
chr5	132652166	132652273	reg1021710.p1	6.777	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-219328	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-223816	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-246116	+	TSC_hg19_v1_chr5_-_132948202 AK055684	295980	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	296019	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	652156	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.342049	CTCF.p2:2:0.342
chr1	112879722	112879814	reg1019886.p1	6.776	+	AY863198 AF120491 NM_004980 NM_172198	-348046	-	TSC_hg19_v1_chr1_+_112298524 AK301697 AK001506 BC031062 BC011556 AF106019 AF155803 AK314312 DQ892249 DQ895449 CU679958	-581219	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	-581333	-	NM_018704 TSC_hg19_v1_chr1_+_112938844 AK023340	59058	+	TSC_hg19_v1_chr1_+_112938871 BC016029 AK022544 AK092791 AX747733	59100	+	AB045116 NM_004185	130271	+	AF120491|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_004980|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_172198|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##AK301697|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK001506|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC031062|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC011556|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF106019|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF155803|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK314312|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ892249|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ895449|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B##NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like##BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK092791|LOC100129406|100129406|uncharacterized LOC100129406##AB045116|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_004185|WNT2B|7482|wingless-type MMTV integration site family, member 2B	0.0	
chr19	19285792	19285972	reg1001496.p1	6.776	+	TSC_hg19_v1_chr19_-_19281094 NM_001145785	-4789	-	TSC_hg19_v1_chr19_-_19281067 AK057210	-4815	-	TSC_hg19_v1_chr19_-_19249268 BC005210 AK096964	-36607	-	TSC_hg19_v1_chr19_-_19302962 X68502 EU831418 EU831443 EU831511 EU831535 X63380 BC064537 BC000489 BC004449 BC010178 BC010931 AK301086 AK316328 BC157868 BC171869	17082	-	NM_003721 NM_134440 BC114558 BC114563 AF094760	17169	+	BC157837 BC171829 BC073957 NM_001145783 NM_001145784 NM_005919	17428	-	NM_001145785|MEF2B|100271849|myocyte enhancer factor 2B##AK057210|MEF2B|100271849|myocyte enhancer factor 2B##BC005210|TMEM161A|54929|transmembrane protein 161A##AK096964|TMEM161A|54929|transmembrane protein 161A##X68502|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##EU831418|MEF2BNB|729991|MEF2B neighbor##EU831443|MEF2BNB|729991|MEF2B neighbor##EU831511|MEF2BNB|729991|MEF2B neighbor##EU831535|MEF2BNB|729991|MEF2B neighbor##X63380|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##BC064537|MEF2BNB|729991|MEF2B neighbor##BC000489|MEF2BNB|729991|MEF2B neighbor##BC004449|MEF2BNB|729991|MEF2B neighbor##BC010178|MEF2BNB|729991|MEF2B neighbor##BC010931|MEF2BNB|729991|MEF2B neighbor##AK301086|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##AK316328|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##BC157868|MEF2BNB|729991|MEF2B neighbor##BC171869|MEF2BNB|729991|MEF2B neighbor##NM_003721|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##NM_134440|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##BC114558|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##BC114563|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##AF094760|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##BC157837|MEF2BNB|729991|MEF2B neighbor##BC171829|MEF2BNB|729991|MEF2B neighbor##BC073957|MEF2BNB|729991|MEF2B neighbor##NM_001145783|MEF2BNB|729991|MEF2B neighbor##NM_001145784|MEF2BNB|729991|MEF2B neighbor##NM_005919|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough	0.0	
chr2	85470927	85471031	reg1021216.p1	6.776	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	-110320	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	-272488	+	TSC_hg19_v1_chr2_+_85198299 NM_020122	-272695	+	TSC_hg19_v1_chr2_-_85555100 CU678967 EU176441 EU176775 X94333 BC028219	84093	-	AK223063 TSC_hg19_v1_chr2_-_85555113 AK126465 AK222829 BX640733 AK312479 BC008461 AF027515 AF027516 U62390	84151	-	TSC_hg19_v1_chr2_-_85555373 BX640868 NM_001206840 NM_001206841 NM_001206844 NM_006464	84409	-	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##EU176441|TGOLN2|10618|trans-golgi network protein 2##EU176775|TGOLN2|10618|trans-golgi network protein 2##X94333|TGOLN2|10618|trans-golgi network protein 2##BC028219|TGOLN2|10618|trans-golgi network protein 2##AK223063|TGOLN2|10618|trans-golgi network protein 2##AK126465|TGOLN2|10618|trans-golgi network protein 2##AK222829|TGOLN2|10618|trans-golgi network protein 2##BX640733|TGOLN2|10618|trans-golgi network protein 2##AK312479|TGOLN2|10618|trans-golgi network protein 2##BC008461|TGOLN2|10618|trans-golgi network protein 2##AF027515|TGOLN2|10618|trans-golgi network protein 2##AF027516|TGOLN2|10618|trans-golgi network protein 2##U62390|TGOLN2|10618|trans-golgi network protein 2##BX640868|TGOLN2|10618|trans-golgi network protein 2##NM_001206840|TGOLN2|10618|trans-golgi network protein 2##NM_001206841|TGOLN2|10618|trans-golgi network protein 2##NM_001206844|TGOLN2|10618|trans-golgi network protein 2##NM_006464|TGOLN2|10618|trans-golgi network protein 2	0.30208	CTCF.p2:26:0.302
chr1	113615568	113615681	reg1014233.p2	6.775	+	TSC_hg19_v1_chr1_+_113499054 BC023568 BC047723 BC062295 BX648855	-116591	+	TSC_hg19_v1_chr1_-_113498861 AK303603 AJ438943 NM_003051	-116723	-	BC045664 AK094064 NM_001166496 AF239919 AL162079 TSC_hg19_v1_chr1_-_113498818 AK296688 AK312500 BC026317	-116907	-	TSC_hg19_v1_chr1_+_113615809 AK291031 CR936669 AB018349 NM_014813 AL161998	191	+	TSC_hg19_v1_chr1_+_113615865 BC117368 BC117370 AB527394	322	+	BC130409 BC144144 NM_001142782 NM_152900	317850	+	BC062295|LOC100506392|100506392|uncharacterized LOC100506392##BX648855|LOC100506392|100506392|uncharacterized LOC100506392##AK303603|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AJ438943|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_003051|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC045664|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK094064|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_001166496|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AF239919|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AL162079|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK296688|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK312500|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC026317|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK291031|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##CR936669|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AB018349|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##NM_014813|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AL161998|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC117368|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC117370|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC130409|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##BC144144|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_001142782|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_152900|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3	0.216624	CTCF.p2:5:0.217
chr7	132394870	132394977	reg1017382.p1	6.775	+	BC028744 NM_181775	-61477	-	TSC_hg19_v1_chr7_-_132261268 NM_001105543 NM_020911	-133628	-	AK123428 TSC_hg19_v1_chr7_-_132261230	-133693	-	AB528286 TSC_hg19_v1_chr7_-_132766813 AK294071 AK000427 NM_017812 AK310236	371841	-	TSC_hg19_v1_chr7_-_132766851 BC011596 BC014839 AK129533	371923	-	TSC_hg19_v1_chr7_+_132937838 NM_001037126 NM_021807 AF380839 AK027688 AL831989 AK298191 BC067263 BC026174 CU693148 AB051486	542926	+	BC028744|PLXNA4|91584|plexin A4##NM_181775|PLXNA4|91584|plexin A4##NM_001105543|PLXNA4|91584|plexin A4##NM_020911|PLXNA4|91584|plexin A4##AK123428|PLXNA4|91584|plexin A4##AK294071|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK000427|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##NM_017812|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK310236|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC011596|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC014839|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK129533|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##NM_001037126|EXOC4|60412|exocyst complex component 4##NM_021807|EXOC4|60412|exocyst complex component 4##AF380839|EXOC4|60412|exocyst complex component 4##AK027688|EXOC4|60412|exocyst complex component 4##AL831989|EXOC4|60412|exocyst complex component 4##AK298191|EXOC4|60412|exocyst complex component 4##BC067263|EXOC4|60412|exocyst complex component 4##BC026174|EXOC4|60412|exocyst complex component 4##AB051486|EXOC4|60412|exocyst complex component 4	0.765338	CTCF.p2:-13:0.765
chr10	95573353	95573495	reg1024288.p1	6.774	+	NM_005097 BC022500 AF055636 AF473548 AK309416 AY358885 AK303956	-55778	+	TSC_hg19_v1_chr10_-_95462320 AJ431721 AJ431722 AJ431723 AJ431724 AJ431725 AK090955 AX746703 NM_145246	-111089	-	NM_006204 U31973 BC111377	-201017	+	TSC_hg19_v1_chr10_+_95653753 AK091309 AX746907 NM_001134658 NM_153226 BC036382 BC058549 BC143283 BC143284 BC104814 BC047102	80316	+	TSC_hg19_v1_chr10_+_95753696 AB040949 BC151854 NM_016341	180290	+	AK297779 AK289852 NM_001165979 AF170071	275407	+	NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1##BC022500|LGI1|9211|leucine-rich, glioma inactivated 1##AF055636|LGI1|9211|leucine-rich, glioma inactivated 1##AF473548|LGI1|9211|leucine-rich, glioma inactivated 1##AK309416|LGI1|9211|leucine-rich, glioma inactivated 1##AY358885|LGI1|9211|leucine-rich, glioma inactivated 1##AK303956|LGI1|9211|leucine-rich, glioma inactivated 1##AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_006204|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##U31973|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##BC111377|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##AK091309|SLC35G1|159371|solute carrier family 35, member G1##NM_001134658|SLC35G1|159371|solute carrier family 35, member G1##NM_153226|SLC35G1|159371|solute carrier family 35, member G1##BC036382|SLC35G1|159371|solute carrier family 35, member G1##BC143284|SLC35G1|159371|solute carrier family 35, member G1##BC104814|SLC35G1|159371|solute carrier family 35, member G1##BC047102|SLC35G1|159371|solute carrier family 35, member G1##AB040949|PLCE1|51196|phospholipase C, epsilon 1##BC151854|PLCE1|51196|phospholipase C, epsilon 1##NM_016341|PLCE1|51196|phospholipase C, epsilon 1##AK297779|PLCE1|51196|phospholipase C, epsilon 1##AK289852|PLCE1|51196|phospholipase C, epsilon 1##NM_001165979|PLCE1|51196|phospholipase C, epsilon 1##AF170071|PLCE1|51196|phospholipase C, epsilon 1	0.99761	CTCF.p2:6:0.998
chr22	36635651	36635755	reg1021795.p2	6.774	+	TSC_hg19_v1_chr22_-_36635666 AF324223 NM_030882	-26	-	AF305429 TSC_hg19_v1_chr22_-_36635617 BC004395 AF305225 AK303978 AB208990 AK056938	-112	-	AK290466 BC006276 AK313637 AK311506 AY014914 AY014915 NM_030643 NM_145660	-34885	-	AF324224 NM_145637	296	-	NM_001136540 NM_001136541 NM_003661 NM_145343 TSC_hg19_v1_chr22_+_36649135 AF019225 AF323540 AK309143 AF305428 AK300454 BC112943 BC141823 BC142720	13436	+	TSC_hg19_v1_chr22_+_36649178 AF305224 AK303919 AK313752 AK298053 BC113867 BC114475 BC127186 BC143038 BC143039 BC017331 AK296099	13486	+	AF324223|APOL2|23780|apolipoprotein L, 2##NM_030882|APOL2|23780|apolipoprotein L, 2##AF305429|APOL2|23780|apolipoprotein L, 2##BC004395|APOL2|23780|apolipoprotein L, 2##AF305225|APOL2|23780|apolipoprotein L, 2##AK303978|APOL2|23780|apolipoprotein L, 2##AB208990|APOL2|23780|apolipoprotein L, 2##AK056938|APOL2|23780|apolipoprotein L, 2##AK290466|APOL4|80832|apolipoprotein L, 4##BC006276|APOL4|80832|apolipoprotein L, 4##AK313637|APOL4|80832|apolipoprotein L, 4##AK311506|APOL4|80832|apolipoprotein L, 4##AY014914|APOL4|80832|apolipoprotein L, 4##AY014915|APOL4|80832|apolipoprotein L, 4##NM_030643|APOL4|80832|apolipoprotein L, 4##NM_145660|APOL4|80832|apolipoprotein L, 4##AF324224|APOL2|23780|apolipoprotein L, 2##NM_145637|APOL2|23780|apolipoprotein L, 2##NM_001136540|APOL1|8542|apolipoprotein L, 1##NM_001136541|APOL1|8542|apolipoprotein L, 1##NM_003661|APOL1|8542|apolipoprotein L, 1##NM_145343|APOL1|8542|apolipoprotein L, 1##AF019225|APOL1|8542|apolipoprotein L, 1##AF323540|APOL1|8542|apolipoprotein L, 1##AK309143|APOL1|8542|apolipoprotein L, 1##AF305428|APOL1|8542|apolipoprotein L, 1##AK300454|APOL1|8542|apolipoprotein L, 1##BC112943|APOL1|8542|apolipoprotein L, 1##BC141823|APOL1|8542|apolipoprotein L, 1##BC142720|APOL1|8542|apolipoprotein L, 1##AF305224|APOL1|8542|apolipoprotein L, 1##AK303919|APOL1|8542|apolipoprotein L, 1##AK313752|APOL1|8542|apolipoprotein L, 1##AK298053|APOL1|8542|apolipoprotein L, 1##BC113867|APOL1|8542|apolipoprotein L, 1##BC114475|APOL1|8542|apolipoprotein L, 1##BC127186|APOL1|8542|apolipoprotein L, 1##BC143038|APOL1|8542|apolipoprotein L, 1##BC143039|APOL1|8542|apolipoprotein L, 1##BC017331|APOL1|8542|apolipoprotein L, 1##AK296099|APOL1|8542|apolipoprotein L, 1	0.687822	CTCF.p2:-8:0.688
chr3	4796072	4796252	reg1020890.p1	6.774	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-260966	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-261034	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-261131	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	224954	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	225019	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	225192	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.021073	
chr5	134240337	134240451	reg1021235.p1	6.774	+	TSC_hg19_v1_chr5_+_134210061 BC001615 AK026278 AK225454 AK225462 BC032568 AK307529 BX538131 EU832512 EU832593	-30342	+	AK056512 NM_024715	-30952	+	TSC_hg19_v1_chr5_+_134181739 BX648529 AJ437658	-58637	+	TSC_hg19_v1_chr5_+_134240808 BC054021 AL136721 NM_032151	391	+	TSC_hg19_v1_chr5_+_134240837 EU832290 EU832374 AK098495 AF499009	466	+	BC110384 NM_178019 AK292427 AF432876 BC101692	63221	+	BC001615|TXNDC15|79770|thioredoxin domain containing 15##AK026278|TXNDC15|79770|thioredoxin domain containing 15##AK225454|TXNDC15|79770|thioredoxin domain containing 15##AK225462|TXNDC15|79770|thioredoxin domain containing 15##BC032568|TXNDC15|79770|thioredoxin domain containing 15##AK307529|TXNDC15|79770|thioredoxin domain containing 15##BX538131|TXNDC15|79770|thioredoxin domain containing 15##EU832512|TXNDC15|79770|thioredoxin domain containing 15##EU832593|TXNDC15|79770|thioredoxin domain containing 15##AK056512|TXNDC15|79770|thioredoxin domain containing 15##NM_024715|TXNDC15|79770|thioredoxin domain containing 15##BX648529|C5orf24|134553|chromosome 5 open reading frame 24##AJ437658|C5orf24|134553|chromosome 5 open reading frame 24##BC054021|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AL136721|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##NM_032151|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##EU832290|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##EU832374|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AK098495|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AF499009|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##BC110384|CATSPER3|347732|cation channel, sperm associated 3##NM_178019|CATSPER3|347732|cation channel, sperm associated 3##AK292427|CATSPER3|347732|cation channel, sperm associated 3##AF432876|CATSPER3|347732|cation channel, sperm associated 3##BC101692|CATSPER3|347732|cation channel, sperm associated 3	0.0	
chr9	140440197	140440318	reg1021171.p1	6.774	+	AY255128 AY255129 AY255130 AY255131 AY255132 NM_001130969 NM_001130970 NM_001130971 NM_001178064 NM_015537 TSC_hg19_v1_chr9_-_140353787	-86455	-	TSC_hg19_v1_chr9_-_140353758 AK074602 BC072412	-86497	-	TSC_hg19_v1_chr9_-_140353612 BC110498	-86625	-	AK125060 AK126267 TSC_hg19_v1_chr9_-_140444881 NM_001098537 NM_152286	4653	-	NM_032477 TSC_hg19_v1_chr9_+_140446353 BC040035 AY232291	6102	+	CU675946 TSC_hg19_v1_chr9_-_140473350 AK307180 BC003123 BC016349 BC017335	33033	-	AY255128|NELF|26012|nasal embryonic LHRH factor##AY255129|NELF|26012|nasal embryonic LHRH factor##AY255130|NELF|26012|nasal embryonic LHRH factor##AY255131|NELF|26012|nasal embryonic LHRH factor##AY255132|NELF|26012|nasal embryonic LHRH factor##NM_001130969|NELF|26012|nasal embryonic LHRH factor##NM_001130970|NELF|26012|nasal embryonic LHRH factor##NM_001130971|NELF|26012|nasal embryonic LHRH factor##NM_001178064|NELF|26012|nasal embryonic LHRH factor##NM_015537|NELF|26012|nasal embryonic LHRH factor##AK074602|NELF|26012|nasal embryonic LHRH factor##BC072412|NELF|26012|nasal embryonic LHRH factor##BC110498|NELF|26012|nasal embryonic LHRH factor##AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7##AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_032477|MRPL41|64975|mitochondrial ribosomal protein L41##BC040035|MRPL41|64975|mitochondrial ribosomal protein L41##AY232291|MRPL41|64975|mitochondrial ribosomal protein L41##AK307180|WDR85|92715|WD repeat domain 85##BC003123|WDR85|92715|WD repeat domain 85##BC016349|WDR85|92715|WD repeat domain 85##BC017335|WDR85|92715|WD repeat domain 85	0.830069	CTCF.p2:0:0.830
chr17	80725163	80725260	reg1017277.p1	6.773	+	TSC_hg19_v1_chr17_+_80710051 AJ006417 DQ891885 EU176650	-15163	+	TSC_hg19_v1_chr17_+_80710000 AK091959 AX747278	-15203	+	TSC_hg19_v1_chr17_+_80709949 BC003094 NM_005993 AB023205 AK293471 BC006364	-15257	+	BC109036 BC109037 AK301690 AK023903 NM_024702	72698	-	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	281259	-	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	284458	-	AJ006417|TBCD|6904|tubulin folding cofactor D##DQ891885|TBCD|6904|tubulin folding cofactor D##EU176650|TBCD|6904|tubulin folding cofactor D##AK091959|TBCD|6904|tubulin folding cofactor D##BC003094|TBCD|6904|tubulin folding cofactor D##NM_005993|TBCD|6904|tubulin folding cofactor D##AB023205|TBCD|6904|tubulin folding cofactor D##AK293471|TBCD|6904|tubulin folding cofactor D##BC006364|TBCD|6904|tubulin folding cofactor D##BC109036|ZNF750|79755|zinc finger protein 750##BC109037|ZNF750|79755|zinc finger protein 750##AK301690|ZNF750|79755|zinc finger protein 750##AK023903|ZNF750|79755|zinc finger protein 750##NM_024702|ZNF750|79755|zinc finger protein 750##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1	0.873752	CTCF.p2:9:0.874
chr3	163503601	163503728	reg1022693.p1	6.773	+	NM_001080440	-2289069	+	AF458592 BC037817 NM_001040100	-2413856	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-2564543	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	1292614	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	1410841	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	2051529	-	NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase	0.0	
chr9	22239092	22239226	reg1021525.p1	6.773	+	TSC_hg19_v1_chr9_+_22113543 BC038540	-125550	+	AF004819 U17075 L36844 BC014469 TSC_hg19_v1_chr9_-_22009305 NM_004936 NM_078487	-229869	-	TSC_hg19_v1_chr9_-_21994420 AB464504 S78535 NM_058195 U38945	-244708	-	TSC_hg19_v1_chr9_+_22446846 AK096011 NM_022160 BC130435 BC130437	207678	+	AB464510 TSC_hg19_v1_chr9_+_22447162	207954	+	AJ290954 TSC_hg19_v1_chr9_+_22447458 AK130018	208290	+	BC038540|CDKN2B-AS|100048912|CDKN2B antisense RNA (non-protein coding)##AF004819|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##U17075|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##L36844|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##BC014469|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##NM_004936|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##NM_078487|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##S78535|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_058195|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##U38945|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##AK096011|DMRTA1|63951|DMRT-like family A1##NM_022160|DMRTA1|63951|DMRT-like family A1##BC130435|DMRTA1|63951|DMRT-like family A1##BC130437|DMRTA1|63951|DMRT-like family A1##AJ290954|DMRTA1|63951|DMRT-like family A1##AK130018|DMRTA1|63951|DMRT-like family A1	0.0	
chr10	30648973	30649080	reg1012468.p2	6.772	+	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	-10793	-	TSC_hg19_v1_chr10_-_30348516 AK308850 NM_020848 BC071601	-300532	-	TSC_hg19_v1_chr10_-_30316350 BC047548	-332595	-	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	73913	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	74095	+	AF139543 BC066294 NM_183058	269609	-	AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##AK308850|KIAA1462|57608|KIAA1462##NM_020848|KIAA1462|57608|KIAA1462##BC071601|KIAA1462|57608|KIAA1462##BC047548|KIAA1462|57608|KIAA1462##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2	0.51523	CTCF.p2:21:0.515
chr1	207355298	207355403	reg1020459.p2	6.772	+	TSC_hg19_v1_chr1_+_207277658 BC022312 NM_000715 AK303798 AK313164 M31452 AK303793	-77701	+	BC005378 NM_000716 NM_001017364 L11245 NM_001017367 AK315137	-92729	+	NM_001017365 NM_001017366	-93139	+	NM_000574 NM_001114752 TSC_hg19_v1_chr1_+_207494999 AF052110 AX772832	139562	+	TSC_hg19_v1_chr1_+_207495024 AK312448 AK300621 AK298549 BC001288 M30142 M31516	139685	+	TSC_hg19_v1_chr1_+_207495084 AB240569 AB240570	139727	+	BC022312|C4BPA|722|complement component 4 binding protein, alpha##NM_000715|C4BPA|722|complement component 4 binding protein, alpha##AK303798|C4BPA|722|complement component 4 binding protein, alpha##AK313164|C4BPA|722|complement component 4 binding protein, alpha##M31452|C4BPA|722|complement component 4 binding protein, alpha##AK303793|C4BPA|722|complement component 4 binding protein, alpha##BC005378|C4BPB|725|complement component 4 binding protein, beta##NM_000716|C4BPB|725|complement component 4 binding protein, beta##NM_001017364|C4BPB|725|complement component 4 binding protein, beta##L11245|C4BPB|725|complement component 4 binding protein, beta##NM_001017367|C4BPB|725|complement component 4 binding protein, beta##AK315137|C4BPB|725|complement component 4 binding protein, beta##NM_001017365|C4BPB|725|complement component 4 binding protein, beta##NM_001017366|C4BPB|725|complement component 4 binding protein, beta##NM_000574|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_001114752|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AF052110|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK312448|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK300621|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK298549|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BC001288|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M30142|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M31516|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240569|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240570|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)	0.061801	
chr7	45703022	45703123	reg1020178.p1	6.772	+	AB209496 TSC_hg19_v1_chr7_+_45614187	-88873	+	TSC_hg19_v1_chr7_+_45614105 AF497515 NM_021116	-88970	+	NM_005856 TSC_hg19_v1_chr7_+_45197392 AJ001016 BC022304 BC053852 AK222469 DQ891371 CU691036 AK311871 AY265459	-505676	+	TSC_hg19_v1_chr7_-_45808577 AL832059 BC092503	105518	-	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	225033	+	AF042356 TSC_hg19_v1_chr7_+_45933167	230062	+	AB209496|ADCY1|107|adenylate cyclase 1 (brain)##AF497515|ADCY1|107|adenylate cyclase 1 (brain)##NM_021116|ADCY1|107|adenylate cyclase 1 (brain)##NM_005856|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AJ001016|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC022304|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC053852|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK222469|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##DQ891371|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK311871|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AY265459|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AL832059|SEPT7P2|641977|septin 7 pseudogene 2##BC092503|SEPT7P2|641977|septin 7 pseudogene 2##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1	0.997432	CTCF.p2:3:0.997
chrX	115330209	115330310	reg1020595.p1	6.772	+	AK313927 NM_000686 X87723 U16957	-28264	+	BC003645 TSC_hg19_v1_chrX_-_115085443	-244820	-	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-502391	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	237508	+	TSC_hg19_v1_chrX_+_115567832 BC093710 BC093712	237578	+	BC062223 NM_001017978 AK000618 AK026566	263890	-	AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##BC003645|LOC642776|642776|uncharacterized LOC642776##NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##BC093710|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##BC093712|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##BC062223|CXorf61|203413|chromosome X open reading frame 61##NM_001017978|CXorf61|203413|chromosome X open reading frame 61##AK000618|CXorf61|203413|chromosome X open reading frame 61##AK026566|CXorf61|203413|chromosome X open reading frame 61	0.0	
chr1	26140686	26140833	reg1021037.p2	6.771	+	TSC_hg19_v1_chr1_+_26126678 AJ306399 NM_020451 NM_206926	-14091	+	AB209275 TSC_hg19_v1_chr1_+_25944698	-196104	+	AF261655 NM_020379	-196801	+	TSC_hg19_v1_chr1_+_26146429 NM_001099625 NM_001099627 BX647921	5651	+	TSC_hg19_v1_chr1_+_26146468 AB075880 AK314297 AK299221 AF173891	5712	+	TSC_hg19_v1_chr1_+_26146696 AL512766 NM_019557	5906	+	AJ306399|SEPN1|57190|selenoprotein N, 1##NM_020451|SEPN1|57190|selenoprotein N, 1##NM_206926|SEPN1|57190|selenoprotein N, 1##AB209275|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_001099625|FAM54B|56181|family with sequence similarity 54, member B##NM_001099627|FAM54B|56181|family with sequence similarity 54, member B##BX647921|FAM54B|56181|family with sequence similarity 54, member B##AB075880|FAM54B|56181|family with sequence similarity 54, member B##AK314297|FAM54B|56181|family with sequence similarity 54, member B##AK299221|FAM54B|56181|family with sequence similarity 54, member B##AF173891|FAM54B|56181|family with sequence similarity 54, member B##AL512766|FAM54B|56181|family with sequence similarity 54, member B##NM_019557|FAM54B|56181|family with sequence similarity 54, member B	0.110087	
chr12	98818706	98818866	reg1021114.p1	6.771	+	BC027605 NM_001135175	-1517543	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-1517755	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-2024469	-	TSC_hg19_v1_chr12_-_98897622 AK126817	78841	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	90581	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	90621	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.813943	CTCF.p2:4:0.786
chr14	54805576	54805668	reg1021267.p1	6.771	+	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	-382089	-	NM_130851	-384353	-	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-1185572	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	58099	+	TSC_hg19_v1_chr14_-_54908095 BX248284 AY358635 AK074781 AK307074 AK311897 AF070654 AF104398 NM_005776 BC103741	102494	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	150063	-	BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##NM_130851|BMP4|652|bone morphogenetic protein 4##NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BX248284|CNIH|10175|cornichon homolog (Drosophila)##AY358635|CNIH|10175|cornichon homolog (Drosophila)##AK074781|CNIH|10175|cornichon homolog (Drosophila)##AK307074|CNIH|10175|cornichon homolog (Drosophila)##AK311897|CNIH|10175|cornichon homolog (Drosophila)##AF070654|CNIH|10175|cornichon homolog (Drosophila)##AF104398|CNIH|10175|cornichon homolog (Drosophila)##NM_005776|CNIH|10175|cornichon homolog (Drosophila)##BC103741|CNIH|10175|cornichon homolog (Drosophila)##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta	0.534979	CTCF.p2:7:0.535
chr19	10620997	10621138	reg1020102.p1	6.771	+	TSC_hg19_v1_chr19_-_10614085 AK056204	-6905	-	TSC_hg19_v1_chr19_-_10614033 NM_203500	-7153	-	TSC_hg19_v1_chr19_-_10613392 BC002930 AF361886 D50922 NM_012289	-7629	-	TSC_hg19_v1_chr19_-_10625679 AB385542 DQ891290 DQ893341 DQ894474 DQ896661 AF331840 AF331841 AF331842	4620	-	BC034703 AK094880 BC067781 NM_030760	7051	-	AK074661 NM_001166215	7569	-	AK056204|KEAP1|9817|kelch-like ECH-associated protein 1##NM_203500|KEAP1|9817|kelch-like ECH-associated protein 1##BC002930|KEAP1|9817|kelch-like ECH-associated protein 1##AF361886|KEAP1|9817|kelch-like ECH-associated protein 1##D50922|KEAP1|9817|kelch-like ECH-associated protein 1##NM_012289|KEAP1|9817|kelch-like ECH-associated protein 1##DQ891290|S1PR5|53637|sphingosine-1-phosphate receptor 5##DQ893341|S1PR5|53637|sphingosine-1-phosphate receptor 5##DQ894474|S1PR5|53637|sphingosine-1-phosphate receptor 5##DQ896661|S1PR5|53637|sphingosine-1-phosphate receptor 5##AF331840|S1PR5|53637|sphingosine-1-phosphate receptor 5##AF331841|S1PR5|53637|sphingosine-1-phosphate receptor 5##AF331842|S1PR5|53637|sphingosine-1-phosphate receptor 5##BC034703|S1PR5|53637|sphingosine-1-phosphate receptor 5##AK094880|S1PR5|53637|sphingosine-1-phosphate receptor 5##BC067781|S1PR5|53637|sphingosine-1-phosphate receptor 5##NM_030760|S1PR5|53637|sphingosine-1-phosphate receptor 5##AK074661|S1PR5|53637|sphingosine-1-phosphate receptor 5##NM_001166215|S1PR5|53637|sphingosine-1-phosphate receptor 5	0.079957	
chr4	185905330	185905419	reg1017756.p1	6.771	+	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	-158140	-	TSC_hg19_v1_chr4_-_185747123 L09229 AK292798	-158273	-	TSC_hg19_v1_chr4_-_185726866 AK296826	-178471	-	BC140795 BC144567 BC144568 BC144569 NM_001029887	34664	+	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	159096	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	219770	-	AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##L09229|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK292798|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##BC140795|HELT|391723|helt bHLH transcription factor##BC144567|HELT|391723|helt bHLH transcription factor##BC144569|HELT|391723|helt bHLH transcription factor##NM_001029887|HELT|391723|helt bHLH transcription factor##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430	0.0	
chr5	33470797	33470929	reg1024552.p1	6.771	+	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	-29724	+	AK292346 TSC_hg19_v1_chr5_+_33440874 NM_152295	-30007	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	-759058	+	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	421182	-	TSC_hg19_v1_chr5_-_33892294 AJ250725	421432	-	D88437 NM_016568	465627	+	AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##AK292346|TARS|6897|threonyl-tRNA synthetase##NM_152295|TARS|6897|threonyl-tRNA synthetase##BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##D88437|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##NM_016568|RXFP3|51289|relaxin/insulin-like family peptide receptor 3	0.852964	CTCF.p2:-6:0.853
chr1	169519642	169519769	reg1017290.p1	6.770	+	AF160812 TSC_hg19_v1_chr1_-_169455181 AF135488 BC018514 AK313779 NM_006996 AF153330	-64530	-	AK304021 TSC_hg19_v1_chr1_-_169454976 AF272359 AJ237724	-64723	-	AK098712 AK223354 AL049687 NM_021179 BC008388 BC008389 BC026073	-123023	-	AB385005 AK226079 M14335 TSC_hg19_v1_chr1_-_169555700 M16967	35959	-	TSC_hg19_v1_chr1_-_169555717 AK291613 AK300469 NM_000130	36034	-	M25322 AK312884 BC068533 NM_003005	79657	-	AF160812|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AF135488|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##BC018514|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AK313779|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##NM_006996|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AF153330|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AK304021|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AF272359|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AJ237724|SLC19A2|10560|solute carrier family 19 (thiamine transporter), member 2##AK098712|C1orf114|57821|chromosome 1 open reading frame 114##AK223354|C1orf114|57821|chromosome 1 open reading frame 114##AL049687|C1orf114|57821|chromosome 1 open reading frame 114##NM_021179|C1orf114|57821|chromosome 1 open reading frame 114##BC008388|C1orf114|57821|chromosome 1 open reading frame 114##BC008389|C1orf114|57821|chromosome 1 open reading frame 114##BC026073|C1orf114|57821|chromosome 1 open reading frame 114##AK226079|F5|2153|coagulation factor V (proaccelerin, labile factor)##M14335|F5|2153|coagulation factor V (proaccelerin, labile factor)##M16967|F5|2153|coagulation factor V (proaccelerin, labile factor)##AK291613|F5|2153|coagulation factor V (proaccelerin, labile factor)##AK300469|F5|2153|coagulation factor V (proaccelerin, labile factor)##NM_000130|F5|2153|coagulation factor V (proaccelerin, labile factor)##M25322|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##AK312884|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##BC068533|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##NM_003005|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)	0.740432	CTCF.p2:-44:0.740
chr8	80527783	80527946	reg1020521.p1	6.770	+	AK292737 TSC_hg19_v1_chr8_+_80523376 BC006302 S82024 AB528346 BT020034 CR456833 DQ892719 DQ895968 CU675343	-4461	+	TSC_hg19_v1_chr8_+_80523354 AK297594 AK308557 AK297485	-4505	+	AK299500 TSC_hg19_v1_chr8_+_80523339	-4525	+	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	152133	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	414638	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	465165	-	AK292737|STMN2|11075|stathmin-like 2##BC006302|STMN2|11075|stathmin-like 2##S82024|STMN2|11075|stathmin-like 2##BT020034|STMN2|11075|stathmin-like 2##CR456833|STMN2|11075|stathmin-like 2##DQ892719|STMN2|11075|stathmin-like 2##DQ895968|STMN2|11075|stathmin-like 2##AK297594|STMN2|11075|stathmin-like 2##AK308557|STMN2|11075|stathmin-like 2##AK297485|STMN2|11075|stathmin-like 2##AK299500|STMN2|11075|stathmin-like 2##AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52	0.304645	CTCF.p2:-17:0.305
chr10	94799626	94799727	reg1019050.p2	6.769	+	AK293857 NM_019053 AF220217 TSC_hg19_v1_chr10_+_94608276 AL832501 EF571007 AK315544 BC028395 CU688490 EU832839 GQ129240	-191419	+	NM_001013848	-205207	+	TSC_hg19_v1_chr10_+_94449711 NM_002729 AK309463 AK314891 BC014336 BC015110 L16499 X67235 AB528006 BC050638 EU446478	-349967	+	AY356349 NM_183374	21344	+	AK027560 NM_057157	33555	+	AK075374 NM_000783 AF005418	33980	+	AK293857|EXOC6|54536|exocyst complex component 6##NM_019053|EXOC6|54536|exocyst complex component 6##AF220217|EXOC6|54536|exocyst complex component 6##AL832501|EXOC6|54536|exocyst complex component 6##EF571007|EXOC6|54536|exocyst complex component 6##AK315544|EXOC6|54536|exocyst complex component 6##BC028395|EXOC6|54536|exocyst complex component 6##EU832839|EXOC6|54536|exocyst complex component 6##GQ129240|EXOC6|54536|exocyst complex component 6##NM_001013848|EXOC6|54536|exocyst complex component 6##NM_002729|HHEX|3087|hematopoietically expressed homeobox##AK314891|HHEX|3087|hematopoietically expressed homeobox##BC014336|HHEX|3087|hematopoietically expressed homeobox##BC015110|HHEX|3087|hematopoietically expressed homeobox##L16499|HHEX|3087|hematopoietically expressed homeobox##X67235|HHEX|3087|hematopoietically expressed homeobox##BC050638|HHEX|3087|hematopoietically expressed homeobox##EU446478|HHEX|3087|hematopoietically expressed homeobox##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1	0.131757	
chr11	64217145	64217241	reg1018130.p3	6.769	+	TSC_hg19_v1_chr11_+_64126642 AK223561 NM_001006944 NM_003942 AJ010119 AK292163 AK313567 BC047896 AK298507 BC028079 CU690526 AF074715	-90462	+	TSC_hg19_v1_chr11_+_64120348 AK126728	-96834	+	TSC_hg19_v1_chr11_+_64107692 BC151218 BC151222 NM_032251 AK090436 BC140822 BC140824 BC141866	-109491	+	AK290791 BC034384 NM_018484 AK129930	105932	+	AB050269 NM_144585 NM_153378	141088	+	BC043422 TSC_hg19_v1_chr11_-_64377473	160209	-	AK223561|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_001006944|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_003942|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AJ010119|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK292163|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK313567|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC047896|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK298507|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC028079|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AF074715|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK126728|CCDC88B|283234|coiled-coil domain containing 88B##BC151218|CCDC88B|283234|coiled-coil domain containing 88B##BC151222|CCDC88B|283234|coiled-coil domain containing 88B##NM_032251|CCDC88B|283234|coiled-coil domain containing 88B##AK090436|CCDC88B|283234|coiled-coil domain containing 88B##BC140822|CCDC88B|283234|coiled-coil domain containing 88B##BC140824|CCDC88B|283234|coiled-coil domain containing 88B##BC141866|CCDC88B|283234|coiled-coil domain containing 88B##AK290791|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##BC034384|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##NM_018484|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AK129930|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AB050269|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_144585|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_153378|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12	0.97107	CTCF.p2:0:0.971
chr16	717933	718061	reg1021493.p2	6.769	+	TSC_hg19_v1_chr16_+_699362 AB067511 BC121185 BC121186 AK091062 AX746759 NM_145294	-18618	+	TSC_hg19_v1_chr16_+_691949 BC007346 BC111391	-26062	+	TSC_hg19_v1_chr16_+_691832 BC001912 NM_138418	-26160	+	TSC_hg19_v1_chr16_+_718131 NM_138769 AY207375 AK308984 BC014942 AL834163	110	+	TSC_hg19_v1_chr16_+_718165 AK024450 AJ517413	181	+	TSC_hg19_v1_chr16_+_725686 AJ272344 AK294136	7703	+	AB067511|WDR90|197335|WD repeat domain 90##BC121185|WDR90|197335|WD repeat domain 90##BC121186|WDR90|197335|WD repeat domain 90##AK091062|WDR90|197335|WD repeat domain 90##NM_145294|WDR90|197335|WD repeat domain 90##BC007346|FAM195A|84331|family with sequence similarity 195, member A##BC111391|FAM195A|84331|family with sequence similarity 195, member A##BC001912|FAM195A|84331|family with sequence similarity 195, member A##NM_138418|FAM195A|84331|family with sequence similarity 195, member A##NM_138769|RHOT2|89941|ras homolog gene family, member T2##AY207375|RHOT2|89941|ras homolog gene family, member T2##AK308984|RHOT2|89941|ras homolog gene family, member T2##BC014942|RHOT2|89941|ras homolog gene family, member T2##AL834163|RHOT2|89941|ras homolog gene family, member T2##AK024450|RHOT2|89941|ras homolog gene family, member T2##AJ517413|RHOT2|89941|ras homolog gene family, member T2##AJ272344|RHBDL1|9028|rhomboid, veinlet-like 1 (Drosophila)##AK294136|RHBDL1|9028|rhomboid, veinlet-like 1 (Drosophila)	0.060833	
chr17	56354622	56354729	reg1020209.p1	6.769	+	NM_001160102 NM_006151 TSC_hg19_v1_chr17_+_56315910 BC107166 BC107167 BX648309 AK303903 U39573 AK310965 AK300653 AK308378 AK131496 EF579964	-38750	+	AK310815 NM_001165927	-57710	-	TSC_hg19_v1_chr17_-_56296608 AK301020 BC010061 DQ185029 NM_017777	-58049	-	HQ258645 S56200 TSC_hg19_v1_chr17_-_56358145	3457	-	TSC_hg19_v1_chr17_-_56358164 BC130476	3490	-	J02694 X04876 M19507 NM_000250 TSC_hg19_v1_chr17_-_56358297	3624	-	NM_001160102|LPO|4025|lactoperoxidase##NM_006151|LPO|4025|lactoperoxidase##BC107166|LPO|4025|lactoperoxidase##BC107167|LPO|4025|lactoperoxidase##BX648309|LPO|4025|lactoperoxidase##AK303903|LPO|4025|lactoperoxidase##U39573|LPO|4025|lactoperoxidase##AK310965|LPO|4025|lactoperoxidase##AK300653|LPO|4025|lactoperoxidase##AK308378|LPO|4025|lactoperoxidase##AK131496|LPO|4025|lactoperoxidase##EF579964|LPO|4025|lactoperoxidase##AK310815|MKS1|54903|Meckel syndrome, type 1##NM_001165927|MKS1|54903|Meckel syndrome, type 1##AK301020|MKS1|54903|Meckel syndrome, type 1##BC010061|MKS1|54903|Meckel syndrome, type 1##DQ185029|MKS1|54903|Meckel syndrome, type 1##NM_017777|MKS1|54903|Meckel syndrome, type 1##HQ258645|MPO|4353|myeloperoxidase##S56200|MPO|4353|myeloperoxidase##BC130476|MPO|4353|myeloperoxidase##J02694|MPO|4353|myeloperoxidase##X04876|MPO|4353|myeloperoxidase##M19507|MPO|4353|myeloperoxidase##NM_000250|MPO|4353|myeloperoxidase	0.197964	
chr2	233717940	233718069	reg1020699.p2	6.769	+	TSC_hg19_v1_chr2_+_233709119 BC008072	-8883	+	AF061118 AJ007557 AK314019 BC037290 NM_001172416 NM_001172417 NM_002242	-76755	-	TSC_hg19_v1_chr2_+_233562045 BX538172 AB014542 BC146775 BX538321 BC043402 BC093090 BC029456 BX537885	-155943	+	AY358535 NM_206895 BC130307 BC130309	16990	+	TSC_hg19_v1_chr2_+_233740495 BC049848 BC035093	22508	+	TSC_hg19_v1_chr2_-_233792866 AK297390 NM_001114090 BC073962	74855	-	BC008072|GIGYF2|26058|GRB10 interacting GYF protein 2##AF061118|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##AJ007557|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##AK314019|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##BC037290|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##NM_001172416|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##NM_001172417|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##NM_002242|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##BX538172|GIGYF2|26058|GRB10 interacting GYF protein 2##AB014542|GIGYF2|26058|GRB10 interacting GYF protein 2##BC146775|GIGYF2|26058|GRB10 interacting GYF protein 2##BX538321|GIGYF2|26058|GRB10 interacting GYF protein 2##BC043402|GIGYF2|26058|GRB10 interacting GYF protein 2##BC093090|GIGYF2|26058|GRB10 interacting GYF protein 2##BC029456|GIGYF2|26058|GRB10 interacting GYF protein 2##BX537885|GIGYF2|26058|GRB10 interacting GYF protein 2##AY358535|C2orf82|389084|chromosome 2 open reading frame 82##NM_206895|C2orf82|389084|chromosome 2 open reading frame 82##BC130307|C2orf82|389084|chromosome 2 open reading frame 82##BC130309|C2orf82|389084|chromosome 2 open reading frame 82##BC049848|C2orf82|389084|chromosome 2 open reading frame 82##BC035093|C2orf82|389084|chromosome 2 open reading frame 82##AK297390|NGEF|25791|neuronal guanine nucleotide exchange factor##NM_001114090|NGEF|25791|neuronal guanine nucleotide exchange factor##BC073962|NGEF|25791|neuronal guanine nucleotide exchange factor	0.724877	CTCF.p2:0:0.725
chr9	130548913	130549083	reg1018356.p1	6.769	+	TSC_hg19_v1_chr9_+_130548375 L25676 BC001968 AK313828 AB590139 DQ891182 DQ894364 DQ894365 AB451289 AB451421 BT019903	-606	+	TSC_hg19_v1_chr9_+_130548326 X80230	-663	+	NM_001261 TSC_hg19_v1_chr9_+_130548312	-690	+	TSC_hg19_v1_chr9_+_130565171 NM_004957 AK315523 AK295309 BC064393 BC009901 BT006639 BC007121 M98045	16238	+	TSC_hg19_v1_chr9_+_130565522 NM_001018078 AY007210	16491	+	TSC_hg19_v1_chr9_+_130565577 AK056920	16587	+	L25676|CDK9|1025|cyclin-dependent kinase 9##BC001968|CDK9|1025|cyclin-dependent kinase 9##AK313828|CDK9|1025|cyclin-dependent kinase 9##DQ891182|CDK9|1025|cyclin-dependent kinase 9##DQ894364|CDK9|1025|cyclin-dependent kinase 9##DQ894365|CDK9|1025|cyclin-dependent kinase 9##AB451289|CDK9|1025|cyclin-dependent kinase 9##AB451421|CDK9|1025|cyclin-dependent kinase 9##BT019903|CDK9|1025|cyclin-dependent kinase 9##X80230|CDK9|1025|cyclin-dependent kinase 9##NM_001261|CDK9|1025|cyclin-dependent kinase 9##NM_004957|FPGS|2356|folylpolyglutamate synthase##AK315523|FPGS|2356|folylpolyglutamate synthase##AK295309|FPGS|2356|folylpolyglutamate synthase##BC064393|FPGS|2356|folylpolyglutamate synthase##BC009901|FPGS|2356|folylpolyglutamate synthase##BT006639|FPGS|2356|folylpolyglutamate synthase##BC007121|FPGS|2356|folylpolyglutamate synthase##M98045|FPGS|2356|folylpolyglutamate synthase##NM_001018078|FPGS|2356|folylpolyglutamate synthase##AY007210|FPGS|2356|folylpolyglutamate synthase##AK056920|FPGS|2356|folylpolyglutamate synthase	0.936272	CTCF.p2:21:0.936
chr7	38081085	38081216	reg1020725.p2	6.768	+	NM_001242948 AK309180	-120223	+	BC000686 AK290885 TSC_hg19_v1_chr7_+_37960509 DQ914439 AJ250475	-120597	+	AY027862 NM_001242946 NM_017549 TSC_hg19_v1_chr7_+_37960259 BC018299	-120927	+	NM_032016 AK315404 TSC_hg19_v1_chr7_+_38217846	136678	+	TSC_hg19_v1_chr7_+_38217932 AK091579 AX747072 AJ492267 AY358645 BC005959	136808	+	BC062761 BC105589 AF151103 NM_001003799 NM_001003806	232089	-	NM_001242948|EPDR1|54749|ependymin related protein 1 (zebrafish)##AK309180|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC000686|EPDR1|54749|ependymin related protein 1 (zebrafish)##AK290885|EPDR1|54749|ependymin related protein 1 (zebrafish)##DQ914439|EPDR1|54749|ependymin related protein 1 (zebrafish)##AJ250475|EPDR1|54749|ependymin related protein 1 (zebrafish)##AY027862|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_001242946|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_017549|EPDR1|54749|ependymin related protein 1 (zebrafish)##BC018299|EPDR1|54749|ependymin related protein 1 (zebrafish)##NM_032016|STARD3NL|83930|STARD3 N-terminal like##AK315404|STARD3NL|83930|STARD3 N-terminal like##AK091579|STARD3NL|83930|STARD3 N-terminal like##AJ492267|STARD3NL|83930|STARD3 N-terminal like##AY358645|STARD3NL|83930|STARD3 N-terminal like##BC005959|STARD3NL|83930|STARD3 N-terminal like##BC062761|TRGV9|6983|T cell receptor gamma variable 9##BC105589|TARP|445347|TCR gamma alternate reading frame protein##AF151103|TARP|445347|TCR gamma alternate reading frame protein##NM_001003799|TARP|445347|TCR gamma alternate reading frame protein##NM_001003806|TARP|445347|TCR gamma alternate reading frame protein	0.025736	
chr1	109440847	109440962	reg1020731.p1	6.767	+	TSC_hg19_v1_chr1_+_109419783 AK295563 BC027732	-21117	+	TSC_hg19_v1_chr1_+_109419606 AB445462 NM_013296 AK314249	-21293	+	AK313772 BC030647 AL832216 NM_152763	-41194	-	TSC_hg19_v1_chr1_-_109506107 AK090563 AX746511 BC002939 AK293786 NM_001048210 NM_015127	65173	-	TSC_hg19_v1_chr1_-_109584725 AK225781 AB020700 AK289789 BC039254 BC034964 NM_001142550 NM_001142551 NM_014969	143815	-	AB587451 TSC_hg19_v1_chr1_-_109618626 X84003 BC017821 BC121180 BC121181 AK312158 NM_005645	177697	-	AK295563|GPSM2|29899|G-protein signaling modulator 2##BC027732|GPSM2|29899|G-protein signaling modulator 2##AB445462|GPSM2|29899|G-protein signaling modulator 2##NM_013296|GPSM2|29899|G-protein signaling modulator 2##AK314249|GPSM2|29899|G-protein signaling modulator 2##AK313772|AKNAD1|254268|AKNA domain containing 1##BC030647|AKNAD1|254268|AKNA domain containing 1##AL832216|AKNAD1|254268|AKNA domain containing 1##NM_152763|AKNAD1|254268|AKNA domain containing 1##AK090563|CLCC1|23155|chloride channel CLIC-like 1##BC002939|CLCC1|23155|chloride channel CLIC-like 1##AK293786|AKNAD1|254268|AKNA domain containing 1##NM_001048210|CLCC1|23155|chloride channel CLIC-like 1##NM_015127|CLCC1|23155|chloride channel CLIC-like 1##AK225781|WDR47|22911|WD repeat domain 47##AB020700|WDR47|22911|WD repeat domain 47##AK289789|WDR47|22911|WD repeat domain 47##BC039254|WDR47|22911|WD repeat domain 47##BC034964|WDR47|22911|WD repeat domain 47##NM_001142550|WDR47|22911|WD repeat domain 47##NM_001142551|WDR47|22911|WD repeat domain 47##NM_014969|WDR47|22911|WD repeat domain 47##X84003|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC121180|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC121181|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##AK312158|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##NM_005645|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa	0.861833	CTCF.p2:25:0.862
chr11	13271706	13271823	reg1020565.p1	6.767	+	TSC_hg19_v1_chr11_+_13030883 NM_001080521	-240840	+	TSC_hg19_v1_chr11_+_12960793 AK075236	-310953	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	-575801	+	TSC_hg19_v1_chr11_+_13299288 NM_001030272 NM_001030273 NM_001178	27528	+	TSC_hg19_v1_chr11_+_13299331 AK315174	27568	+	BC041129 TSC_hg19_v1_chr11_+_13299351 AK291510	27594	+	NM_001080521|RASSF10|644943|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_001030272|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001030273|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001178|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK315174|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##BC041129|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK291510|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like	0.886878	CTCF.p2:-11:0.887
chr15	55401199	55401320	reg1020608.p1	6.767	+	NM_001080534	-1096159	+	AK096055 BX537884 NM_182758	-1349412	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-2319065	-	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	87833	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	87920	-	AF125393 NM_183234 U57094 U38654 NM_004580	161278	-	NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family	0.578965	CTCF.p2:-6:0.579
chr15	90431539	90431679	reg1021335.p1	6.767	+	TSC_hg19_v1_chr15_-_90358085 AB209918 NM_001150 AK298242	-73537	-	AB462940 X13276 TSC_hg19_v1_chr15_-_90349860 BC058928 M22324	-81733	-	AK298339 TSC_hg19_v1_chr15_-_90347590	-84039	-	TSC_hg19_v1_chr15_-_90437227 DQ892982 DQ896230 BC002785 AL110108 BC007773 AK222698 AK294712 X99459 BC010020 AK312467	5608	-	NM_005829	6007	-	AK093274 AX748027 CU691000 TSC_hg19_v1_chr15_-_90456145 AK000495 BC053602 NM_001199058 NM_182616	24496	-	AB209918|ANPEP|290|alanyl (membrane) aminopeptidase##NM_001150|ANPEP|290|alanyl (membrane) aminopeptidase##AK298242|ANPEP|290|alanyl (membrane) aminopeptidase##X13276|ANPEP|290|alanyl (membrane) aminopeptidase##BC058928|ANPEP|290|alanyl (membrane) aminopeptidase##M22324|ANPEP|290|alanyl (membrane) aminopeptidase##AK298339|ANPEP|290|alanyl (membrane) aminopeptidase##DQ892982|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ896230|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC002785|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AL110108|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC007773|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK222698|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK294712|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##X99459|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC010020|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK312467|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##NM_005829|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK093274|C15orf38|348110|chromosome 15 open reading frame 38##AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##BC053602|C15orf38|348110|chromosome 15 open reading frame 38##NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##NM_182616|C15orf38|348110|chromosome 15 open reading frame 38	0.995642	CTCF.p2:16:0.996
chr22	31847842	31847976	reg1023377.p1	6.767	+	TSC_hg19_v1_chr22_+_31795589 AK315659 BC019285 AJ005940 BC020803 AF078103 AK098576 CR456488 DQ890690 DQ893872 CU013048 CU013336 CU676724 AB463011 BT007237 CR542059	-52284	+	NM_004147 TSC_hg19_v1_chr22_+_31795576	-52352	+	TSC_hg19_v1_chr22_+_31742744 BC004550 CR456348 AK000471 CU013058 CU013346	-105079	+	BC033028 NM_001164501 TSC_hg19_v1_chr22_-_31885678 AF240775	37698	-	TSC_hg19_v1_chr22_-_31885761 BC012734	37835	-	TSC_hg19_v1_chr22_-_31885787 BC032941 AK314636 NM_001164502 NM_019843 DQ655937	37938	-	AK315659|DRG1|4733|developmentally regulated GTP binding protein 1##BC019285|DRG1|4733|developmentally regulated GTP binding protein 1##AJ005940|DRG1|4733|developmentally regulated GTP binding protein 1##BC020803|DRG1|4733|developmentally regulated GTP binding protein 1##AF078103|DRG1|4733|developmentally regulated GTP binding protein 1##AK098576|DRG1|4733|developmentally regulated GTP binding protein 1##CR456488|DRG1|4733|developmentally regulated GTP binding protein 1##DQ890690|DRG1|4733|developmentally regulated GTP binding protein 1##DQ893872|DRG1|4733|developmentally regulated GTP binding protein 1##CU013048|DRG1|4733|developmentally regulated GTP binding protein 1##CU013336|DRG1|4733|developmentally regulated GTP binding protein 1##BT007237|DRG1|4733|developmentally regulated GTP binding protein 1##CR542059|DRG1|4733|developmentally regulated GTP binding protein 1##NM_004147|DRG1|4733|developmentally regulated GTP binding protein 1##BC004550|FLJ20464|54944|uncharacterized protein FLJ20464##CR456348|FLJ20464|54944|uncharacterized protein FLJ20464##AK000471|FLJ20464|54944|uncharacterized protein FLJ20464##BC033028|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##NM_001164501|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##AF240775|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##BC012734|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##BC032941|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##AK314636|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##NM_001164502|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##NM_019843|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##DQ655937|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1	0.961858	CTCF.p2:-17:0.962
chr9	122052186	122052284	reg1019510.p1	6.767	+	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-1585548	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	-1585621	+	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	-1585771	+	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	79423	-	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	1290118	-	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	1424482	-	U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4##BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9	0.968986	CTCF.p2:13:0.969
chrX	64943681	64943862	reg1021587.p2	6.767	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	-56123	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	-56224	+	NM_002444 TSC_hg19_v1_chrX_+_64887520	-56254	+	TSC_hg19_v1_chrX_+_65235302 DQ680071 DQ680072	291520	+	DQ891770 DQ894953 BC010525 AJ132502 AK293215 AK298389 AK075153 AK297050 AK301417 AK075171 NM_001100431 NM_001184830 NM_001184831 NM_007268	316131	-	NM_138737 TSC_hg19_v1_chrX_+_65382512	438704	+	AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##NM_002444|MSN|4478|moesin##DQ891770|VSIG4|11326|V-set and immunoglobulin domain containing 4##DQ894953|VSIG4|11326|V-set and immunoglobulin domain containing 4##BC010525|VSIG4|11326|V-set and immunoglobulin domain containing 4##AJ132502|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK293215|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK298389|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075153|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK297050|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK301417|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075171|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001100431|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184830|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184831|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_007268|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_138737|HEPH|9843|hephaestin	0.0	
chr10	49045837	49045949	reg1022361.p1	6.766	+	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-217951	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	-218284	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	-238970	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	161928	-	CR749241 NM_001018071	437033	-	TSC_hg19_v1_chr10_+_49514722 AK292523	468893	+	BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##AK292523|MAPK8|5599|mitogen-activated protein kinase 8	0.58499	CTCF.p2:2:0.585
chr11	73675659	73675760	reg1000606.p2	6.766	+	AY138810 NM_153614	-14346	+	BC028677 TSC_hg19_v1_chr11_+_73588043 AK021910 AK222501 NM_025155 AK316394 AK225520 BC045774 BC021541 BC028628 BC006142 CU675271 AF087895	-87664	+	TSC_hg19_v1_chr11_-_73587892 AL359618 AK000434 NM_016565 BC106036	-87813	-	U94592 BC011737 TSC_hg19_v1_chr11_-_73693862	18135	-	TSC_hg19_v1_chr11_-_73693886 AK222540 AK222557 NM_003355	18176	-	TSC_hg19_v1_chr11_-_73694300 AK025742	18634	-	AY138810|DNAJB13|374407|DnaJ (Hsp40) homolog, subfamily B, member 13##NM_153614|DNAJB13|374407|DnaJ (Hsp40) homolog, subfamily B, member 13##BC028677|PAAF1|80227|proteasomal ATPase-associated factor 1##AK021910|PAAF1|80227|proteasomal ATPase-associated factor 1##AK222501|PAAF1|80227|proteasomal ATPase-associated factor 1##NM_025155|PAAF1|80227|proteasomal ATPase-associated factor 1##AK316394|PAAF1|80227|proteasomal ATPase-associated factor 1##AK225520|PAAF1|80227|proteasomal ATPase-associated factor 1##BC045774|PAAF1|80227|proteasomal ATPase-associated factor 1##BC021541|PAAF1|80227|proteasomal ATPase-associated factor 1##BC028628|PAAF1|80227|proteasomal ATPase-associated factor 1##BC006142|PAAF1|80227|proteasomal ATPase-associated factor 1##AF087895|PAAF1|80227|proteasomal ATPase-associated factor 1##AL359618|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##AK000434|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##NM_016565|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##BC106036|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##BC011737|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK025742|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)	0.0	
chr12	110283250	110283347	reg1016215.p2	6.766	+	BC117426 BC143307 BC143315 TSC_hg19_v1_chr12_-_110271207 AJ296305 NM_021625	-12090	-	TSC_hg19_v1_chr12_-_110271182 AL834192	-12111	-	AB073669 AB100308 AF258465 AF263523 DQ059644 DQ059645 DQ059646 NM_001177431 AB590809 NM_001177428 NM_001177433 NM_147204 AB032427	-30651	-	AY372530 AY372531 CU679533 AK313457 AF209704 TSC_hg19_v1_chr12_-_110318304 AY372532 BC009932 NM_016433	34980	-	TSC_hg19_v1_chr12_+_110338090 AK092736 AX747696 NM_001143852 BC004285 AK301262	54804	+	AY007230 NM_032300 BC022838	55073	+	BC117426|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143307|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143315|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AJ296305|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_021625|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AL834192|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB073669|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB100308|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AF258465|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AF263523|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059644|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059645|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059646|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177431|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177428|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177433|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_147204|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB032427|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AY372530|GLTP|51228|glycolipid transfer protein##AY372531|GLTP|51228|glycolipid transfer protein##AK313457|GLTP|51228|glycolipid transfer protein##AF209704|GLTP|51228|glycolipid transfer protein##AY372532|GLTP|51228|glycolipid transfer protein##BC009932|GLTP|51228|glycolipid transfer protein##NM_016433|GLTP|51228|glycolipid transfer protein##AK092736|TCHP|84260|trichoplein, keratin filament binding##NM_001143852|TCHP|84260|trichoplein, keratin filament binding##BC004285|TCHP|84260|trichoplein, keratin filament binding##AK301262|TCHP|84260|trichoplein, keratin filament binding##AY007230|TCHP|84260|trichoplein, keratin filament binding##NM_032300|TCHP|84260|trichoplein, keratin filament binding##BC022838|TCHP|84260|trichoplein, keratin filament binding	0.892717	CTCF.p2:-12:0.893
chrX	23026657	23026790	reg1023261.p1	6.766	+	AY039237 NM_182699 BC067878 BC051703	-8639	+	GQ355336 NM_152577 AK098601 BC074910 BC126190 BC126192 HQ258412 HQ258552	-735655	+	NM_000444 U87284 AD000712 AK298030 BC105057 BC105059 U75645 U60475	-975698	+	AK298796 NM_173495 AK054858 BC121061	326337	+	TSC_hg19_v1_chrX_+_23685615 BC016770	658900	+	TSC_hg19_v1_chrX_+_23685640 BC007107 NM_006406 U25182	658923	+	AY039237|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##NM_182699|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC067878|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC051703|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##GQ355336|ZNF645|158506|zinc finger protein 645##NM_152577|ZNF645|158506|zinc finger protein 645##AK098601|ZNF645|158506|zinc finger protein 645##BC074910|ZNF645|158506|zinc finger protein 645##BC126190|ZNF645|158506|zinc finger protein 645##BC126192|ZNF645|158506|zinc finger protein 645##HQ258412|ZNF645|158506|zinc finger protein 645##HQ258552|ZNF645|158506|zinc finger protein 645##NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AK298796|PTCHD1|139411|patched domain containing 1##NM_173495|PTCHD1|139411|patched domain containing 1##AK054858|PTCHD1|139411|patched domain containing 1##BC121061|PTCHD1|139411|patched domain containing 1##BC016770|PRDX4|10549|peroxiredoxin 4##BC007107|PRDX4|10549|peroxiredoxin 4##NM_006406|PRDX4|10549|peroxiredoxin 4##U25182|PRDX4|10549|peroxiredoxin 4	1.35927	CTCF.p2:-10:0.719	CTCF.p2:13:0.641
chr12	49682239	49682389	reg1020080.p1	6.765	+	TSC_hg19_v1_chr12_+_49658867 BC011790 BC004949 BC033064 BC051297 BC019298 BC021088	-23430	+	TSC_hg19_v1_chr12_+_49658864 D28390 AK223024 BC005946 NM_032704	-23451	+	TSC_hg19_v1_chr12_-_49582864 BC006468 BC050637 AF141347 AK057842 AK297775 BC057823 NM_006009 AK298838	-99482	-	NM_006262 TSC_hg19_v1_chr12_+_49688929 BC032703 AB528454 CU689492 DQ893358 DQ896677	6631	+	NM_001100620 NM_005480 TSC_hg19_v1_chr12_+_49717037 AK315211 AK296811 AK309716 AK310709 AK299302 BC032583 BC018627 BC011597	34722	+	BC110812 AF466366 NM_001008223	48649	-	BC011790|TUBA1C|84790|tubulin, alpha 1c##BC004949|TUBA1C|84790|tubulin, alpha 1c##BC033064|TUBA1C|84790|tubulin, alpha 1c##BC051297|TUBA1C|84790|tubulin, alpha 1c##BC019298|TUBA1C|84790|tubulin, alpha 1c##BC021088|TUBA1C|84790|tubulin, alpha 1c##D28390|TUBA1C|84790|tubulin, alpha 1c##AK223024|TUBA1C|84790|tubulin, alpha 1c##BC005946|TUBA1C|84790|tubulin, alpha 1c##NM_032704|TUBA1C|84790|tubulin, alpha 1c##BC006468|TUBA1A|7846|tubulin, alpha 1a##BC050637|TUBA1A|7846|tubulin, alpha 1a##AF141347|TUBA1A|7846|tubulin, alpha 1a##AK057842|TUBA1A|7846|tubulin, alpha 1a##AK297775|TUBA1A|7846|tubulin, alpha 1a##BC057823|TUBA1A|7846|tubulin, alpha 1a##NM_006009|TUBA1A|7846|tubulin, alpha 1a##AK298838|TUBA1A|7846|tubulin, alpha 1a##NM_006262|PRPH|5630|peripherin##BC032703|PRPH|5630|peripherin##DQ893358|PRPH|5630|peripherin##DQ896677|PRPH|5630|peripherin##NM_001100620|TROAP|10024|trophinin associated protein (tastin)##NM_005480|TROAP|10024|trophinin associated protein (tastin)##AK315211|TROAP|10024|trophinin associated protein (tastin)##AK296811|TROAP|10024|trophinin associated protein (tastin)##AK309716|TROAP|10024|trophinin associated protein (tastin)##AK310709|TROAP|10024|trophinin associated protein (tastin)##AK299302|TROAP|10024|trophinin associated protein (tastin)##BC032583|TROAP|10024|trophinin associated protein (tastin)##BC018627|TROAP|10024|trophinin associated protein (tastin)##BC011597|TROAP|10024|trophinin associated protein (tastin)##BC110812|C1QL4|338761|complement component 1, q subcomponent-like 4##AF466366|C1QL4|338761|complement component 1, q subcomponent-like 4##NM_001008223|C1QL4|338761|complement component 1, q subcomponent-like 4	0.999334	CTCF.p2:-19:0.999
chr21	45358820	45359001	reg1001021.p3	6.765	+	AK300562 NM_001037553	-13632	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	-73787	+	TSC_hg19_v1_chr21_+_45285029 AY358704	-73850	+	TSC_hg19_v1_chr21_+_45432211 BC071569 NM_003274 U61500 BC046241 BC052247 BC094823 U19252 BC101728 AB385171 CU692332	73430	+	TSC_hg19_v1_chr21_+_45527202 AK314184	168292	+	TSC_hg19_v1_chr21_+_45527251 NM_005049	168318	+	AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC071569|TRAPPC10|7109|trafficking protein particle complex 10##NM_003274|TRAPPC10|7109|trafficking protein particle complex 10##U61500|TRAPPC10|7109|trafficking protein particle complex 10##BC046241|TRAPPC10|7109|trafficking protein particle complex 10##BC052247|TRAPPC10|7109|trafficking protein particle complex 10##BC094823|TRAPPC10|7109|trafficking protein particle complex 10##U19252|TRAPPC10|7109|trafficking protein particle complex 10##BC101728|TRAPPC10|7109|trafficking protein particle complex 10##AK314184|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##NM_005049|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)	0.0	
chr13	28633501	28633628	reg1020372.p2	6.764	+	NM_001105577	-70791	-	TSC_hg19_v1_chr13_-_28543453 Y13709	-90101	-	TSC_hg19_v1_chr13_-_28543325 BC014461 NM_001265	-90256	-	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	41123	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	79102	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	435680	-	NM_001105577|PRHOXNB|646625|parahox cluster neighbor##Y13709|CDX2|1045|caudal type homeobox 2##BC014461|CDX2|1045|caudal type homeobox 2##NM_001265|CDX2|1045|caudal type homeobox 2##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	0.994936	CTCF.p2:-2:0.995
chr15	65128085	65128199	reg1021259.p2	6.764	+	BC137503 BC137504 TSC_hg19_v1_chr15_-_65117814 BC018978 AK026345 EU084033 NM_025049 AB185926 AB185927	-10307	-	BC131612 BC148208 AY369207 NM_194272 TSC_hg19_v1_chr15_-_65067789 AK127873	-60396	-	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	-132673	-	AK311036 NM_001195059 NM_025201 TSC_hg19_v1_chr15_+_65134113 AK096203 BC008744 AF494534	5965	+	TSC_hg19_v1_chr15_+_65204100 AK098736 NM_182703 AK075298 BC110610 AK307698	75947	+	TSC_hg19_v1_chr15_-_65281780 AF212231 NM_001127889	153667	-	BC137503|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC137504|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC018978|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AK026345|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##EU084033|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_025049|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185926|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185927|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC131612|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC148208|RBPMS2|348093|RNA binding protein with multiple splicing 2##AY369207|RBPMS2|348093|RNA binding protein with multiple splicing 2##NM_194272|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK127873|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_001195059|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##NM_025201|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK096203|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC008744|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AF494534|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK098736|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##NM_182703|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK075298|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##BC110610|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK307698|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	0.0	
chr5	70015146	70015269	reg1020676.p2	6.764	+	TSC_hg19_v1_chr5_-_69882021 AK097091	-133177	-	TSC_hg19_v1_chr5_+_69696959 AK097091	-318288	+	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	-669775	+	NM_021967 NM_022968 BC021174 NM_001178087 NM_022978 AF073519 AF073518 BC035932 BC093880 BC171749 BC101970 BC103687 BC104738 BC143260 BC093882 BC143255	181376	+	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	205643	+	AB048534 NM_004536 NM_022892	305733	-	AK097091|SMA4|11039|glucuronidase, beta pseudogene##AK097091|SMA4|11039|glucuronidase, beta pseudogene##NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric##NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric##AB048534|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_004536|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_022892|NAIP|4671|NLR family, apoptosis inhibitory protein	0.98704	CTCF.p2:8:0.987
chr7	41085244	41085360	reg1018820.p1	6.764	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-910693	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-910771	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	-911171	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	657383	-	NM_000168	1191315	-	TSC_hg19_v1_chr7_-_42276797 AK308429	1191493	-	AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3	0.996998	CTCF.p2:8:0.997
chr10	11208151	11208272	reg1019624.p1	6.763	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-719	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-765	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-786	+	NM_001080491	366062	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	445425	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	576187	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.0	
chr12	50038613	50038784	reg1000024.p2	6.763	+	BC067364 NM_001031698	-14372	+	TSC_hg19_v1_chr12_+_50017344 AK123353 BC050398 AL834216 NM_012272	-21327	+	AM393365 AL136748 BC035621 AK302702 AK093242 AX748009 NM_032130	-39353	-	AB384661 TSC_hg19_v1_chr12_-_50101046	62312	-	TSC_hg19_v1_chr12_-_50101189 AK128195	62460	-	TSC_hg19_v1_chr12_-_50101206 AB095934 BC159100 NM_175736 NM_198900	62514	-	BC067364|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_001031698|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AK123353|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##BC050398|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AL834216|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_012272|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AM393365|FAM186B|84070|family with sequence similarity 186, member B##AL136748|FAM186B|84070|family with sequence similarity 186, member B##BC035621|FAM186B|84070|family with sequence similarity 186, member B##AK302702|FAM186B|84070|family with sequence similarity 186, member B##AK093242|FAM186B|84070|family with sequence similarity 186, member B##NM_032130|FAM186B|84070|family with sequence similarity 186, member B##AK128195|FMNL3|91010|formin-like 3##AB095934|FMNL3|91010|formin-like 3##BC159100|FMNL3|91010|formin-like 3##NM_175736|FMNL3|91010|formin-like 3##NM_198900|FMNL3|91010|formin-like 3	0.0	
chr12	56709910	56710044	reg1019163.p2	6.763	+	TSC_hg19_v1_chr12_-_56709793 BC001027 AK312921	-177	-	TSC_hg19_v1_chr12_-_56709750 AF186113 AB015631 BC065015	-263	-	NM_004077 TSC_hg19_v1_chr12_-_56694176	-15802	-	TSC_hg19_v1_chr12_-_56709831 AY032624 AY359102 NM_001190991 NM_014255	2	-	BX648106 BC094885 NM_001127460	17512	-	AK310822 AB014610 BC024043 NM_001166279 NM_014871	17801	-	BC001027|CNPY2|10330|canopy 2 homolog (zebrafish)##AK312921|CNPY2|10330|canopy 2 homolog (zebrafish)##AF186113|CNPY2|10330|canopy 2 homolog (zebrafish)##AB015631|CNPY2|10330|canopy 2 homolog (zebrafish)##BC065015|CNPY2|10330|canopy 2 homolog (zebrafish)##NM_004077|CS|1431|citrate synthase##AY032624|CNPY2|10330|canopy 2 homolog (zebrafish)##AY359102|CNPY2|10330|canopy 2 homolog (zebrafish)##NM_001190991|CNPY2|10330|canopy 2 homolog (zebrafish)##NM_014255|CNPY2|10330|canopy 2 homolog (zebrafish)##BX648106|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC094885|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_001127460|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##AK310822|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##AB014610|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC024043|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_001166279|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_014871|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)	0.994131	CTCF.p2:0:0.994
chr5	15014076	15014227	reg1023668.p1	6.763	+	DQ892588 DQ895806 AK222631 AK315012 BC014526 AF274753 AY358503 TSC_hg19_v1_chr5_-_14871888 AL833238 AB046801 BC009835 NM_054027	-142296	-	TSC_hg19_v1_chr5_+_14664826 BC015392	-349310	+	TSC_hg19_v1_chr5_+_14664772 NM_138348	-349375	+	TSC_hg19_v1_chr5_+_15500291 AB020647 NM_012304	486148	+	BC136424 TSC_hg19_v1_chr5_+_15500549	486393	+	BC075061 TSC_hg19_v1_chr5_+_15500760	486597	+	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)##DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)##AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)##AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)##BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)##AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)##AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)##AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)##BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)##NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)##BC015392|FAM105B|90268|family with sequence similarity 105, member B##NM_138348|FAM105B|90268|family with sequence similarity 105, member B##AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7	0.984683	CTCF.p2:16:0.985
chr4	98642377	98642463	reg1018633.p2	6.762	+	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	-1881162	+	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	-2172044	-	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	-2172241	-	CU691442 BC036870 NM_174952	421925	-	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	540174	+	TSC_hg19_v1_chr4_-_99579781 BC009704 AF065389 AK315723 NM_005723	937339	-	NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC009704|TSPAN5|10098|tetraspanin 5##AF065389|TSPAN5|10098|tetraspanin 5##AK315723|TSPAN5|10098|tetraspanin 5##NM_005723|TSPAN5|10098|tetraspanin 5	0.988599	CTCF.p2:8:0.989
chr6	87947695	87947811	reg1019387.p2	6.762	+	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	-82464	+	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	-142935	-	NM_000865	-300730	+	TSC_hg19_v1_chr6_+_87964930 AL832366	17227	+	BC016386 TSC_hg19_v1_chr6_+_87967437	19682	+	BC063594 AY684300 TSC_hg19_v1_chr6_+_87969709	21911	+	NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292##V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##AL832366|ZNF292|23036|zinc finger protein 292##BC016386|ZNF292|23036|zinc finger protein 292##BC063594|ZNF292|23036|zinc finger protein 292##AY684300|ZNF292|23036|zinc finger protein 292	0.981111	CTCF.p2:-16:0.981
chr11	94331213	94331321	reg1019414.p2	6.761	+	NM_152431 AB079366 AK093475 AX748151 BC031060 DQ891240 DQ894425 AB590313 CU689100	-30689	+	TSC_hg19_v1_chr11_+_94277605 M58596	-53668	+	AK293616 NM_002033 TSC_hg19_v1_chr11_+_94277086 M58597 BC136373 BC136374	-54188	+	TSC_hg19_v1_chr11_+_94501528 BX648729 NM_130847 AK093699 AX748266 AF453742 BC037539 AK074084 AM393663	170322	+	TSC_hg19_v1_chr11_-_94706721 AK309042 AF110775 AF161497 AK225956 AK314900 BC032629 AJ250393 BC040946 BC006975	375455	-	TSC_hg19_v1_chr11_-_94706742 NM_016403	375490	-	NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)##AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)##AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)##BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##AK293616|PIWIL4|143689|piwi-like 4 (Drosophila)##NM_002033|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58597|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136373|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136374|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BX648729|AMOTL1|154810|angiomotin like 1##NM_130847|AMOTL1|154810|angiomotin like 1##AK093699|AMOTL1|154810|angiomotin like 1##AF453742|AMOTL1|154810|angiomotin like 1##BC037539|AMOTL1|154810|angiomotin like 1##AK074084|AMOTL1|154810|angiomotin like 1##AM393663|AMOTL1|154810|angiomotin like 1##AK309042|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AF110775|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AF161497|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AK225956|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AK314900|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC032629|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AJ250393|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC040946|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC006975|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##NM_016403|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)	0.279978	CTCF.p2:7:0.280
chr14	21439197	21439298	reg1018801.p1	6.761	+	TSC_hg19_v1_chr14_+_21423628 NM_002934 X55988 BC093678 BC093680 M28129 M24157 BC096059 M30510	-15599	+	TSC_hg19_v1_chr14_+_21359543 NM_002935 X15161 M28128 BC096060 BC096061 BC096062	-79688	+	TSC_hg19_v1_chr14_-_21271004 AK312100 BC022882 BC005324 NM_002933 NM_198234 NM_198235	-168229	-	NM_001029991 NM_022734	18717	+	TSC_hg19_v1_chr14_+_21458138 AF321002 AK024512 AK303484 AK304180 AK315999 BC005053 AB590821 CU674975	18899	+	NM_014579 AK314974 AF186081 D83039 BC096723 BC098254 BC098274 BC110057 AB527985	28262	+	NM_002934|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##X55988|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093678|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093680|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M28129|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M24157|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC096059|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M30510|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##NM_002935|RNASE3|6037|ribonuclease, RNase A family, 3##X15161|RNASE3|6037|ribonuclease, RNase A family, 3##M28128|RNASE3|6037|ribonuclease, RNase A family, 3##BC096060|RNASE3|6037|ribonuclease, RNase A family, 3##BC096061|RNASE3|6037|ribonuclease, RNase A family, 3##BC096062|RNASE3|6037|ribonuclease, RNase A family, 3##AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_001029991|METTL17|64745|methyltransferase like 17##NM_022734|METTL17|64745|methyltransferase like 17##AF321002|METTL17|64745|methyltransferase like 17##AK024512|METTL17|64745|methyltransferase like 17##AK303484|METTL17|64745|methyltransferase like 17##AK304180|METTL17|64745|methyltransferase like 17##AK315999|METTL17|64745|methyltransferase like 17##BC005053|METTL17|64745|methyltransferase like 17##NM_014579|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##AK314974|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##AF186081|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##D83039|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##BC096723|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##BC098254|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##BC098274|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2##BC110057|SLC39A2|29986|solute carrier family 39 (zinc transporter), member 2	0.652175	CTCF.p2:2:0.626
chr11	128818639	128818734	reg1021303.p1	6.759	+	NM_001195195 NM_001251964 NM_022112	-5393	-	AB527772 AY302135 NM_001195194 BC069399 BC069426	-10936	-	AK125634 TSC_hg19_v1_chr11_-_128776110	-42572	-	AB018255 AY194287 TSC_hg19_v1_chr11_-_128894084 AB079856 NM_014715	75375	-	EF127492 NM_001142685	243406	-	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	427195	+	NM_001195195|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001251964|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_022112|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##AY302135|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001195194|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##BC069399|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##BC069426|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##AK125634|C11orf45|219833|chromosome 11 open reading frame 45##AB018255|ARHGAP32|9743|Rho GTPase activating protein 32##AY194287|ARHGAP32|9743|Rho GTPase activating protein 32##AB079856|ARHGAP32|9743|Rho GTPase activating protein 32##NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32##EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2	0.0	
chr11	69533041	69533159	reg1019200.p1	6.759	+	AF110400 AY358302 NM_005117	-13995	-	TSC_hg19_v1_chr11_-_69490116 BC065542 AK294004 AF503940 AK311918 NM_153451 AK026600	-42962	-	EF639695 BC006448 BC019024 AK054816 AK125280 TSC_hg19_v1_chr11_-_69490092	-43047	-	M17446 NM_002007	57070	-	NM_005247	101091	-	AY728143 NM_018043 TSC_hg19_v1_chr11_+_69924473	391340	+	AF110400|FGF19|9965|fibroblast growth factor 19##AY358302|FGF19|9965|fibroblast growth factor 19##NM_005117|FGF19|9965|fibroblast growth factor 19##BC065542|ORAOV1|220064|oral cancer overexpressed 1##AK294004|ORAOV1|220064|oral cancer overexpressed 1##AF503940|ORAOV1|220064|oral cancer overexpressed 1##AK311918|ORAOV1|220064|oral cancer overexpressed 1##NM_153451|ORAOV1|220064|oral cancer overexpressed 1##AK026600|ORAOV1|220064|oral cancer overexpressed 1##EF639695|ORAOV1|220064|oral cancer overexpressed 1##BC006448|ORAOV1|220064|oral cancer overexpressed 1##BC019024|ORAOV1|220064|oral cancer overexpressed 1##AK125280|ORAOV1|220064|oral cancer overexpressed 1##M17446|FGF4|2249|fibroblast growth factor 4##NM_002007|FGF4|2249|fibroblast growth factor 4##NM_005247|FGF3|2248|fibroblast growth factor 3##AY728143|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_018043|ANO1|55107|anoctamin 1, calcium activated chloride channel	0.343353	
chr22	17686469	17686592	reg1022543.p1	6.759	+	TSC_hg19_v1_chr22_-_17680487 AK027682 AK074702 NM_177405	-6016	-	AF273270 NM_017829	-40354	-	TSC_hg19_v1_chr22_+_17640246 AF307448	-46266	+	AF190746 NM_017424	4248	-	AK314321 TSC_hg19_v1_chr22_-_17700267 AK295174 AK292689	13833	-	TSC_hg19_v1_chr22_-_17747522 AF277398	61041	-	AK027682|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK074702|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_177405|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF273270|CECR5|27440|cat eye syndrome chromosome region, candidate 5##NM_017829|CECR5|27440|cat eye syndrome chromosome region, candidate 5##AF307448|CECR5-AS1|100130717|CECR5 antisense RNA 1 (non-protein coding)##AF190746|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_017424|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK314321|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK295174|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK292689|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF277398|CECR3|27442|cat eye syndrome chromosome region, candidate 3 (non-protein coding)	0.592109	CTCF.p2:-10:0.592
chr5	173213909	173214014	reg1019590.p2	6.759	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-170288	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-170333	-	BC003114 TSC_hg19_v1_chr5_-_173043602	-170364	-	TSC_hg19_v1_chr5_+_173315343 NM_030627	101417	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	202229	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	258750	+	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein	0.0	
chr1	112937183	112937364	reg1020637.p1	6.758	+	AY863198 AF120491 NM_004980 NM_172198	-405551	-	TSC_hg19_v1_chr1_+_112298524 AK301697 AK001506 BC031062 BC011556 AF106019 AF155803 AK314312 DQ892249 DQ895449 CU679958	-638724	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	-638838	-	NM_018704 TSC_hg19_v1_chr1_+_112938844 AK023340	1553	+	TSC_hg19_v1_chr1_+_112938871 BC016029 AK022544 AK092791 AX747733	1595	+	AB045116 NM_004185	72766	+	AF120491|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_004980|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_172198|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##AK301697|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK001506|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC031062|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC011556|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF106019|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF155803|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK314312|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ892249|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ895449|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B##NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like##BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK092791|LOC100129406|100129406|uncharacterized LOC100129406##AB045116|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_004185|WNT2B|7482|wingless-type MMTV integration site family, member 2B	0.024709	
chr15	72045152	72045293	reg1024118.p1	6.758	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	-205642	+	NM_024817 BC140868	-611412	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-637351	-	AF121129 NM_014249 NM_016346 AF148128	57690	+	AK097557 NM_001166340	361376	+	NM_001172109 NM_001172110	363996	+	AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172109|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172110|SENP8|123228|SUMO/sentrin specific peptidase family member 8	0.987598	CTCF.p2:-20:0.988
chr7	6641987	6642103	reg1020909.p1	6.758	+	TSC_hg19_v1_chr7_+_6629662 BC001076 BC005121 AK056149 NM_024067	-12259	+	TSC_hg19_v1_chr7_+_6617111 AK223532 NM_001134387 NM_001134388 NM_001134389 NM_018106 AK001341 AK308971 AL136674 BC001239 AY359090	-24927	+	NM_001145118	-50979	-	NM_017560	13481	+	TSC_hg19_v1_chr7_-_6746579 BC051892 BC154414 AB021643 NM_006956 NM_016265 AK293925	104535	-	AK092111 TSC_hg19_v1_chr7_+_6746715	104664	+	BC001076|C7orf26|79034|chromosome 7 open reading frame 26##BC005121|C7orf26|79034|chromosome 7 open reading frame 26##AK056149|C7orf26|79034|chromosome 7 open reading frame 26##NM_024067|C7orf26|79034|chromosome 7 open reading frame 26##AK223532|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134387|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134388|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134389|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_018106|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK001341|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK308971|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AL136674|ZDHHC4|55146|zinc finger, DHHC-type containing 4##BC001239|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AY359090|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001145118|GRID2IP|392862|glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein##NM_017560|ZNF853|54753|zinc finger protein 853##BC051892|ZNF12|7559|zinc finger protein 12##BC154414|ZNF12|7559|zinc finger protein 12##AB021643|ZNF12|7559|zinc finger protein 12##NM_006956|ZNF12|7559|zinc finger protein 12##NM_016265|ZNF12|7559|zinc finger protein 12##AK293925|ZNF12|7559|zinc finger protein 12	0.10529	
chr1	154792226	154792336	reg1021831.p1	6.757	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-191816	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-191867	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-211581	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	39981	-	BX649146 TSC_hg19_v1_chr1_-_154840541	48220	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	50465	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.075839	
chr16	1773687	1773801	reg1021314.p1	6.757	+	TSC_hg19_v1_chr16_+_1756229 AB621811 AB028989 BC150266 NM_001040439 NM_015133 AK024437 BC137123 BC137124 BC144486 CR749696	-17474	+	TSC_hg19_v1_chr16_+_1728290 BC014438 AK296888 AK303927 AY598330 AK309930	-45438	+	BC060853 TSC_hg19_v1_chr16_+_1728289	-45458	+	TSC_hg19_v1_chr16_-_1821542 AK308663 AB528303 DQ892515 EU176697 U29656	47795	-	BC000250 NM_002513 TSC_hg19_v1_chr16_-_1821728	47995	-	TSC_hg19_v1_chr16_-_1823132 EF036486 AB527721 BC001182 NM_023936	49391	-	AB028989|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC150266|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##NM_001040439|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##NM_015133|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##AK024437|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC137123|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC137124|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC144486|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##CR749696|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC014438|HN1L|90861|hematological and neurological expressed 1-like##AK296888|HN1L|90861|hematological and neurological expressed 1-like##AK303927|HN1L|90861|hematological and neurological expressed 1-like##AY598330|HN1L|90861|hematological and neurological expressed 1-like##AK309930|HN1L|90861|hematological and neurological expressed 1-like##BC060853|HN1L|90861|hematological and neurological expressed 1-like##AK308663|NME3|4832|non-metastatic cells 3, protein expressed in##DQ892515|NME3|4832|non-metastatic cells 3, protein expressed in##EU176697|NME3|4832|non-metastatic cells 3, protein expressed in##U29656|NME3|4832|non-metastatic cells 3, protein expressed in##BC000250|NME3|4832|non-metastatic cells 3, protein expressed in##NM_002513|NME3|4832|non-metastatic cells 3, protein expressed in##BC001182|MRPS34|65993|mitochondrial ribosomal protein S34##NM_023936|MRPS34|65993|mitochondrial ribosomal protein S34	0.0	
chr2	60788019	60788152	reg1023382.p1	6.757	+	AF080216 TSC_hg19_v1_chr2_-_60780784	-7307	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	-7563	-	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2319603	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	195399	+	TSC_hg19_v1_chr2_+_61108702 AK303926	320620	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	320652	+	AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)	0.999909	CTCF.p2:18:1.000
chr10	71503075	71503176	reg1021215.p1	6.756	+	NM_145306 BC013587	-113118	+	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	-170025	-	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	-291792	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	58532	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	58564	+	TSC_hg19_v1_chr10_+_71562275 M59217	59166	+	NM_145306|C10orf35|219738|chromosome 10 open reading frame 35##BC013587|C10orf35|219738|chromosome 10 open reading frame 35##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##M59217|COL13A1|1305|collagen, type XIII, alpha 1	0.917621	CTCF.p2:8:0.918
chr11	76521408	76521562	reg1021697.p1	6.756	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	-27208	+	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	-139676	-	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	-140517	-	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	50447	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	50508	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	223974	+	NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3##NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)	0.919771	CTCF.p2:-33:0.920
chr2	192623788	192623925	reg1022042.p1	6.756	+	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	-80994	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-513758	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-607549	-	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	87882	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	88115	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	435458	-	NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2	0.997488	CTCF.p2:-23:0.997
chr6	51215229	51215336	reg1021571.p1	6.755	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-428747	+	AY028376 NM_172238	-534026	+	DQ012016 NM_001037498	-1198919	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	737113	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	835924	+	AF384857 JF305974 AB590713 BC070124 NM_052872	893979	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.989692	CTCF.p2:20:0.990
chr11	117900161	117900322	reg1022634.p1	6.754	+	TSC_hg19_v1_chr11_+_117857155 U00672 BC028082 AB590303 CU688390 DQ891031 DQ893720 AK316146 AB209626	-42954	+	TSC_hg19_v1_chr11_+_117857108 AK291645 AK301484 NM_001558 AK301260 AK316342 AK313049 AK301492	-43151	+	BC018715 AK300283 AB048796 AB048797 BC114928 AY190317 AK027798 TSC_hg19_v1_chr11_-_117800150 NM_001077263 NM_001206789 NM_001206790 NM_001244995	-100124	-	NM_001083947 NM_001173551 NM_001173552 NM_019894 AK304113 AK311290 TSC_hg19_v1_chr11_+_117947754	47502	+	BC004855 TSC_hg19_v1_chr11_+_117947792 AK308434 AK296855 AK303173 AK290361 AK304215 AF179224 AY358530 AF216312 BC011703 AK172766	47586	+	TSC_hg19_v1_chr11_-_118016149 BC035017 NM_001142349	115917	-	U00672|IL10RA|3587|interleukin 10 receptor, alpha##BC028082|IL10RA|3587|interleukin 10 receptor, alpha##DQ891031|IL10RA|3587|interleukin 10 receptor, alpha##DQ893720|IL10RA|3587|interleukin 10 receptor, alpha##AK316146|IL10RA|3587|interleukin 10 receptor, alpha##AB209626|IL10RA|3587|interleukin 10 receptor, alpha##AK291645|IL10RA|3587|interleukin 10 receptor, alpha##AK301484|IL10RA|3587|interleukin 10 receptor, alpha##NM_001558|IL10RA|3587|interleukin 10 receptor, alpha##AK301260|IL10RA|3587|interleukin 10 receptor, alpha##AK316342|IL10RA|3587|interleukin 10 receptor, alpha##AK313049|IL10RA|3587|interleukin 10 receptor, alpha##AK301492|IL10RA|3587|interleukin 10 receptor, alpha##BC018715|TMPRSS13|84000|transmembrane protease, serine 13##AK300283|TMPRSS13|84000|transmembrane protease, serine 13##AB048796|TMPRSS13|84000|transmembrane protease, serine 13##AB048797|TMPRSS13|84000|transmembrane protease, serine 13##BC114928|TMPRSS13|84000|transmembrane protease, serine 13##AY190317|TMPRSS13|84000|transmembrane protease, serine 13##AK027798|TMPRSS13|84000|transmembrane protease, serine 13##NM_001077263|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206789|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206790|TMPRSS13|84000|transmembrane protease, serine 13##NM_001244995|TMPRSS13|84000|transmembrane protease, serine 13##NM_001083947|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173551|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173552|TMPRSS4|56649|transmembrane protease, serine 4##NM_019894|TMPRSS4|56649|transmembrane protease, serine 4##AK304113|TMPRSS4|56649|transmembrane protease, serine 4##BC004855|TMPRSS4|56649|transmembrane protease, serine 4##AK308434|TMPRSS4|56649|transmembrane protease, serine 4##AK296855|TMPRSS4|56649|transmembrane protease, serine 4##AK303173|TMPRSS4|56649|transmembrane protease, serine 4##AK290361|TMPRSS4|56649|transmembrane protease, serine 4##AK304215|TMPRSS4|56649|transmembrane protease, serine 4##AF179224|TMPRSS4|56649|transmembrane protease, serine 4##AY358530|TMPRSS4|56649|transmembrane protease, serine 4##AF216312|TMPRSS4|56649|transmembrane protease, serine 4##BC011703|TMPRSS4|56649|transmembrane protease, serine 4##AK172766|TMPRSS4|56649|transmembrane protease, serine 4##BC035017|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_001142349|SCN4B|6330|sodium channel, voltage-gated, type IV, beta	0.400816	CTCF.p2:-14:0.308
chr16	80403600	80403696	reg1019737.p1	6.754	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-769033	-	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-2270193	+	NM_001244755	-2340663	+	AF125108 NM_130897 BC054892 BC035232	171240	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	434399	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	636436	+	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N	0.450092	CTCF.p2:32:0.424
chr3	115705571	115705675	reg1021030.p1	6.754	+	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-363204	+	NM_001130064 NM_002045	-363473	+	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	-839509	-	AK315286 TSC_hg19_v1_chr3_-_116164338	458708	-	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	458750	-	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	3047910	-	AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43##BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315286|LSAMP|4045|limbic system-associated membrane protein##BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11	0.680779	CTCF.p2:-8:0.681
chr6	12045313	12045451	reg1023590.p1	6.754	+	NM_002114	-32659	+	NM_001143948 NM_032744	-266103	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-506884	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	245211	+	TSC_hg19_v1_chr6_+_12514301 D28417	468920	+	AK295263 TSC_hg19_v1_chr6_+_12716998	671561	+	NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1	0.91294	CTCF.p2:6:0.913
chr1	226175344	226175459	reg1020231.p2	6.753	+	U81523 BC116448 AF081513 BC035718 AK027520 AK075344 TSC_hg19_v1_chr1_-_226128921 AK304549 NM_001172425 NM_003240 BC065929	-46370	-	AK001508 AK298845 TSC_hg19_v1_chr1_-_226111979	-63422	-	BC014868 TSC_hg19_v1_chr1_-_226111970 AF087859 BC020553 NM_013328	-63450	-	BC016290 TSC_hg19_v1_chr1_-_226187017	11601	-	TSC_hg19_v1_chr1_-_226187023 AK092701 AX747679 BX648319	11621	-	TSC_hg19_v1_chr1_-_226187045 AK291008 AK127780 BC071563 AK308441	11635	-	U81523|LEFTY2|7044|left-right determination factor 2##AF081513|LEFTY2|7044|left-right determination factor 2##BC035718|LEFTY2|7044|left-right determination factor 2##AK027520|LEFTY2|7044|left-right determination factor 2##AK075344|LEFTY2|7044|left-right determination factor 2##AK304549|LEFTY2|7044|left-right determination factor 2##NM_001172425|LEFTY2|7044|left-right determination factor 2##NM_003240|LEFTY2|7044|left-right determination factor 2##BC065929|LEFTY2|7044|left-right determination factor 2##AK001508|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC014868|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##AF087859|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC020553|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##NM_013328|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC016290|C1orf55|163859|chromosome 1 open reading frame 55##AK092701|C1orf55|163859|chromosome 1 open reading frame 55##BX648319|C1orf55|163859|chromosome 1 open reading frame 55##AK291008|C1orf55|163859|chromosome 1 open reading frame 55##AK127780|C1orf55|163859|chromosome 1 open reading frame 55##BC071563|C1orf55|163859|chromosome 1 open reading frame 55##AK308441|C1orf55|163859|chromosome 1 open reading frame 55	0.910157	CTCF.p2:-2:0.910
chr12	4713920	4714068	reg1021263.p1	6.753	+	AK292322 BC031244 NM_003845 GU139746 AK311576	-14740	+	NM_001130862 NM_006479 TSC_hg19_v1_chr12_+_4648072 AK316367 AF006259 AK290428 AK291948 AK300773 BC006992 BC005973 BC016330 AK096930 AL832243 CU677609	-65968	+	TSC_hg19_v1_chr12_-_4647672 AK074479 BX641128	-66326	-	AF087003 U85715 BC047535 AF093408 NM_006422	40314	-	TSC_hg19_v1_chr12_-_4758185 AK292451	44202	-	TSC_hg19_v1_chr12_+_4758272 NM_005002 BC015837 AF050641 AK308588 BC009311 AK291067 BC111546 L04490	44284	+	AK292322|DYRK4|8798|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4##BC031244|DYRK4|8798|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4##NM_003845|DYRK4|8798|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4##NM_001130862|RAD51AP1|10635|RAD51 associated protein 1##NM_006479|RAD51AP1|10635|RAD51 associated protein 1##AK316367|RAD51AP1|10635|RAD51 associated protein 1##AF006259|RAD51AP1|10635|RAD51 associated protein 1##AK290428|RAD51AP1|10635|RAD51 associated protein 1##AK291948|RAD51AP1|10635|RAD51 associated protein 1##AK300773|RAD51AP1|10635|RAD51 associated protein 1##BC006992|RAD51AP1|10635|RAD51 associated protein 1##BC005973|RAD51AP1|10635|RAD51 associated protein 1##BC016330|RAD51AP1|10635|RAD51 associated protein 1##AK096930|RAD51AP1|10635|RAD51 associated protein 1##AL832243|RAD51AP1|10635|RAD51 associated protein 1##AK074479|C12orf4|57102|chromosome 12 open reading frame 4##BX641128|C12orf4|57102|chromosome 12 open reading frame 4##AF087003|AKAP3|10566|A kinase (PRKA) anchor protein 3##U85715|AKAP3|10566|A kinase (PRKA) anchor protein 3##BC047535|AKAP3|10566|A kinase (PRKA) anchor protein 3##AF093408|AKAP3|10566|A kinase (PRKA) anchor protein 3##NM_006422|AKAP3|10566|A kinase (PRKA) anchor protein 3##AK292451|AKAP3|10566|A kinase (PRKA) anchor protein 3##NM_005002|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC015837|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AF050641|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK308588|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC009311|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK291067|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC111546|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##L04490|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa	0.0	
chr14	63775571	63775672	reg1020555.p1	6.753	+	NM_020663 AF087862 AK027351 AK027278 BC062575 AB209218 AF309563	-104440	+	AK074484 NM_172376	-207038	-	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	-263692	-	NM_145171	9971	-	AB451233 AB451358 EU447000 TSC_hg19_v1_chr14_-_64006406	230785	-	BC093766 BC101479 BC143231 BC143234 TSC_hg19_v1_chr14_-_64009581	233952	-	NM_020663|RHOJ|57381|ras homolog gene family, member J##AF087862|RHOJ|57381|ras homolog gene family, member J##AK027351|RHOJ|57381|ras homolog gene family, member J##AK027278|RHOJ|57381|ras homolog gene family, member J##BC062575|RHOJ|57381|ras homolog gene family, member J##AB209218|RHOJ|57381|ras homolog gene family, member J##AF309563|RHOJ|57381|ras homolog gene family, member J##AK074484|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172376|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_145171|GPHB5|122876|glycoprotein hormone beta 5##AB451233|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AB451358|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##EU447000|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC093766|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC101479|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC143231|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC143234|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform	0.99672	CTCF.p2:7:0.997
chr7	72425299	72425479	reg1022427.p2	6.753	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-147	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-28515	+	TSC_hg19_v1_chr7_+_72395623 AK123814 AB289621	-29764	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	143642	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	297435	-	AK057366 AY081948 AY081949 NM_178125	316695	-	BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##AK123814|POM121|9883|POM121 membrane glycoprotein##AB289621|POM121|9883|POM121 membrane glycoprotein##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50	0.0	
chr3	943956	944117	reg1020974.p1	6.752	+	AK126307 TSC_hg19_v1_chr3_+_577916	-366121	+	NM_001253388 BC104918 BC143496 BC143498 AB384920	-582624	+	TSC_hg19_v1_chr3_+_239671 AK055236	-704365	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	190627	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	1196525	+	NM_001206955	1336476	+	NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK055236|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4	0.98594	CTCF.p2:18:0.986
chr12	111612443	111612571	reg1019898.p1	6.751	+	BC151245 NM_015267 AB006631 AF271236	-140635	+	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	-254129	-	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-327704	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	194339	-	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	194403	-	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	231242	+	BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3	0.997654	CTCF.p2:20:0.998
chr8	72129350	72129476	reg1021618.p2	6.751	+	AY534247 BC111381 NM_001011720 BC151845 BC137104 BC137105	-547773	+	TSC_hg19_v1_chr8_-_71581419 BC000878 BC008505 NM_016027	-547964	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	-548029	-	AF467247 BC121798 BC121799 AJ000097 NM_172058 NM_172059 NM_172060	139436	-	AK127798 AK295897 TSC_hg19_v1_chr8_-_72274006	144572	-	TSC_hg19_v1_chr8_-_72274302 AK307379	144880	-	AY534247|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC111381|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##NM_001011720|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC151845|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137104|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137105|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC000878|LACTB2|51110|lactamase, beta 2##BC008505|LACTB2|51110|lactamase, beta 2##NM_016027|LACTB2|51110|lactamase, beta 2##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2##AF467247|EYA1|2138|eyes absent homolog 1 (Drosophila)##BC121798|EYA1|2138|eyes absent homolog 1 (Drosophila)##BC121799|EYA1|2138|eyes absent homolog 1 (Drosophila)##AJ000097|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172058|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172059|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172060|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)	0.944566	CTCF.p2:-24:0.945
chr11	45354056	45354143	reg1018942.p1	6.750	+	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	-46349	-	AF275818 NM_020229	-238536	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	-381682	-	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	333085	-	NM_001145265 NM_001145266	471523	+	TSC_hg19_v1_chr11_+_45825944 AK225428 AK002182 AK091245	471815	+	AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1##AK225428|SLC35C1|55343|solute carrier family 35, member C1##AK002182|SLC35C1|55343|solute carrier family 35, member C1##AK091245|SLC35C1|55343|solute carrier family 35, member C1	0.998714	CTCF.p2:39:0.999
chr3	196190258	196190439	reg1014029.p3	6.750	+	TSC_hg19_v1_chr3_-_196159304 NM_015562	-31015	-	TSC_hg19_v1_chr3_-_196159299 AK026451 AK129880 AK303630 AK308699 AK307899	-31049	-	AB018337 TSC_hg19_v1_chr3_-_196159295 BC047420	-31065	-	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	40230	-	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	51865	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	105042	-	NM_015562|UBXN7|26043|UBX domain protein 7##AK026451|UBXN7|26043|UBX domain protein 7##AK129880|UBXN7|26043|UBX domain protein 7##AK303630|UBXN7|26043|UBX domain protein 7##AK308699|UBXN7|26043|UBX domain protein 7##AK307899|UBXN7|26043|UBX domain protein 7##AB018337|UBXN7|26043|UBX domain protein 7##BC047420|UBXN7|26043|UBX domain protein 7##BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53	0.0	
chr1	109251759	109251880	reg1023521.p1	6.749	+	TSC_hg19_v1_chr1_+_109242188 AY211915	-9624	+	TSC_hg19_v1_chr1_+_109234948 NM_018061 BC040127 BC053838 BC034581 BC007757 BC024275 BC009453 BC016296 AL833950 AK001192 BC130346 BC132963 BC144243 BC107801 CU691032	-16759	+	TSC_hg19_v1_chr1_-_109204071 AK311542 AK310152 AK055087 NM_144584	-47728	-	NM_001144937	3736	+	TSC_hg19_v1_chr1_+_109289278 NM_007269	37456	+	TSC_hg19_v1_chr1_+_109289295 AK290134 AK223170 AK291322 AK312910 D63506 BC047764 BC028028	37488	+	AY211915|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##NM_018061|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC040127|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC053838|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC034581|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC007757|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC024275|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC009453|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC016296|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##AL833950|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##AK001192|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC130346|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC132963|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC144243|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC107801|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##AK311542|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK310152|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK055087|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_144584|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_001144937|FNDC7|163479|fibronectin type III domain containing 7##NM_007269|STXBP3|6814|syntaxin binding protein 3##AK290134|STXBP3|6814|syntaxin binding protein 3##AK223170|STXBP3|6814|syntaxin binding protein 3##AK291322|STXBP3|6814|syntaxin binding protein 3##AK312910|STXBP3|6814|syntaxin binding protein 3##D63506|STXBP3|6814|syntaxin binding protein 3##BC047764|STXBP3|6814|syntaxin binding protein 3##BC028028|STXBP3|6814|syntaxin binding protein 3	0.994304	CTCF.p2:9:0.994
chr4	73152107	73152231	reg1019411.p2	6.749	+	AK290937 NM_001144756 NM_053036 AF236083	-247299	+	AF119815 NM_004885 AK308069 AJ311393	-254600	+	AK223458 NM_001204306	-480933	-	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	282322	-	BC101684 BC143642 TSC_hg19_v1_chr4_-_73935431 AK096310 AY957564 AY957565 BC071812 NM_173827	783274	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	936610	-	AK290937|NPFFR2|10886|neuropeptide FF receptor 2##NM_001144756|NPFFR2|10886|neuropeptide FF receptor 2##NM_053036|NPFFR2|10886|neuropeptide FF receptor 2##AF236083|NPFFR2|10886|neuropeptide FF receptor 2##AF119815|NPFFR2|10886|neuropeptide FF receptor 2##NM_004885|NPFFR2|10886|neuropeptide FF receptor 2##AK308069|NPFFR2|10886|neuropeptide FF receptor 2##AJ311393|NPFFR2|10886|neuropeptide FF receptor 2##AK223458|GC|2638|group-specific component (vitamin D binding protein)##NM_001204306|GC|2638|group-specific component (vitamin D binding protein)##AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC101684|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC143642|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK096310|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957564|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957565|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC071812|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_173827|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17	0.016453	
chr12	93381821	93382001	reg1007638.p3	6.748	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-58813	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-58868	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	-58973	-	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	389981	+	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	453775	-	TSC_hg19_v1_chr12_-_93835718 D83004	453807	-	NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.0	
chr18	961681	961812	reg1020702.p1	6.748	+	NM_001117 BC093837 BC101803 S83513	-56405	+	AK313050 NM_001099733	-56803	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-149443	-	AK290001 BC111020 NM_022840	1609709	-	NM_006101 BC005239 TSC_hg19_v1_chr18_+_2571579 AK289396 AK313184 BC035617 BC010171	1609799	+	TSC_hg19_v1_chr18_+_2571589 AF017790	1609849	+	NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4##NM_006101|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC005239|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK289396|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK313184|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC035617|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC010171|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AF017790|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)	0.895015	CTCF.p2:7:0.895
chr4	40926688	40926793	reg1018750.p2	6.748	+	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-67565	-	BC042401 NM_024677 BC036568 AK024063	-174794	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-294033	-	BC088372 TSC_hg19_v1_chr4_-_40936716	9938	-	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	289829	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	332156	+	AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK304206|RBM47|54502|RNA binding motif protein 47##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.526978	CTCF.p2:-18:0.527
chr9	112669193	112669326	reg1021445.p1	6.748	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	-126644	+	BC039306 NM_001037293 AK095003	-266190	+	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	-408670	-	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	141650	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	141704	+	NM_001136562 AK300427	218533	+	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2	0.0	
chr6	41703355	41703478	reg1020355.p1	6.747	+	M33782 TSC_hg19_v1_chr6_-_41703347	-70	-	TSC_hg19_v1_chr6_-_41702787 AJ608787 BC032448 NM_007162	-651	-	AJ608793 AJ608794 AJ608792 TSC_hg19_v1_chr6_-_41673723	-29715	-	TSC_hg19_v1_chr6_-_41703962 AK298390 AJ608786 NM_001167827	556	-	J04443 BC042578 BC073740 U75272 TSC_hg19_v1_chr6_-_41715136 AK223274 AK301298 AK301325 NM_001166424 NM_002630	11701	-	TSC_hg19_v1_chr6_-_41747644 NM_006653	44273	-	M33782|TFEB|7942|transcription factor EB##AJ608787|TFEB|7942|transcription factor EB##BC032448|TFEB|7942|transcription factor EB##NM_007162|TFEB|7942|transcription factor EB##AJ608793|TFEB|7942|transcription factor EB##AJ608794|TFEB|7942|transcription factor EB##AJ608792|TFEB|7942|transcription factor EB##AK298390|TFEB|7942|transcription factor EB##AJ608786|TFEB|7942|transcription factor EB##NM_001167827|TFEB|7942|transcription factor EB##J04443|PGC|5225|progastricsin (pepsinogen C)##BC042578|PGC|5225|progastricsin (pepsinogen C)##BC073740|PGC|5225|progastricsin (pepsinogen C)##U75272|PGC|5225|progastricsin (pepsinogen C)##AK223274|PGC|5225|progastricsin (pepsinogen C)##AK301298|PGC|5225|progastricsin (pepsinogen C)##AK301325|PGC|5225|progastricsin (pepsinogen C)##NM_001166424|PGC|5225|progastricsin (pepsinogen C)##NM_002630|PGC|5225|progastricsin (pepsinogen C)##NM_006653|FRS3|10817|fibroblast growth factor receptor substrate 3	0.991951	CTCF.p2:-45:0.992
chr8	128220396	128220576	reg1020424.p4	6.747	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-649762	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-649931	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1257073	-	DQ486513 NM_001159542	207370	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	527839	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	528004	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.25315	CTCF.p2:103:0.223
chr10	112262824	112262991	reg1018600.p2	6.746	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-5156	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-198207	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-198314	-	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	64585	+	AF067163 TSC_hg19_v1_chr10_+_112344155	81208	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	141222	+	NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20	0.0	
chr1	155699033	155699139	reg1018758.p2	6.746	+	TSC_hg19_v1_chr1_+_155658903 X83544	-40176	+	AK225869 AK302281 NM_001199849 NM_001199850 NM_001199851 TSC_hg19_v1_chr1_+_155658881 AK293117 BC107487 BC107488 NM_004632 NM_033657	-40200	+	AK298201 CR749790 U18321 TSC_hg19_v1_chr1_+_155658873	-40210	+	TSC_hg19_v1_chr1_-_155774769 AK315191 BC071650	75705	-	TSC_hg19_v1_chr1_-_155827003 AB232668 AY335492 BC114629 BC115703 BX537764 NM_001037533 NM_032292 AY335490 BX648043 AK098734 BX648802	127890	-	TSC_hg19_v1_chr1_-_155827021 AB195687 AB195688	127966	-	X83544|DAP3|7818|death associated protein 3##AK225869|DAP3|7818|death associated protein 3##AK302281|DAP3|7818|death associated protein 3##NM_001199849|DAP3|7818|death associated protein 3##NM_001199850|DAP3|7818|death associated protein 3##NM_001199851|DAP3|7818|death associated protein 3##AK293117|DAP3|7818|death associated protein 3##BC107487|DAP3|7818|death associated protein 3##BC107488|DAP3|7818|death associated protein 3##NM_004632|DAP3|7818|death associated protein 3##NM_033657|DAP3|7818|death associated protein 3##AK298201|DAP3|7818|death associated protein 3##CR749790|DAP3|7818|death associated protein 3##U18321|DAP3|7818|death associated protein 3##AK315191|GON4L|54856|gon-4-like (C. elegans)##BC071650|GON4L|54856|gon-4-like (C. elegans)##AB232668|GON4L|54856|gon-4-like (C. elegans)##AY335492|GON4L|54856|gon-4-like (C. elegans)##BC114629|GON4L|54856|gon-4-like (C. elegans)##BC115703|GON4L|54856|gon-4-like (C. elegans)##BX537764|GON4L|54856|gon-4-like (C. elegans)##NM_001037533|GON4L|54856|gon-4-like (C. elegans)##NM_032292|GON4L|54856|gon-4-like (C. elegans)##AY335490|GON4L|54856|gon-4-like (C. elegans)##BX648043|GON4L|54856|gon-4-like (C. elegans)##AK098734|GON4L|54856|gon-4-like (C. elegans)##BX648802|GON4L|54856|gon-4-like (C. elegans)##AB195687|GON4L|54856|gon-4-like (C. elegans)##AB195688|GON4L|54856|gon-4-like (C. elegans)	0.206772	CTCF.p2:3:0.207
chr6	133890119	133890241	reg1020118.p1	6.746	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	-327648	+	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	-327689	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	-754461	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	320074	+	TSC_hg19_v1_chr6_+_134210277 AF035718 AF047419 BC025697	320090	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	383184	+	BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)##AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21##AF035718|TCF21|6943|transcription factor 21##AF047419|TCF21|6943|transcription factor 21##BC025697|TCF21|6943|transcription factor 21##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1	0.038869	
chr9	111945943	111946084	reg1021451.p2	6.746	+	TSC_hg19_v1_chr9_-_111929489 AF155065 NM_014334	-16484	-	TSC_hg19_v1_chr9_-_111882212 BC142984 AF153415 NM_032012	-63793	-	TSC_hg19_v1_chr9_-_111882206 AK299952	-63808	-	TSC_hg19_v1_chr9_-_112083007 AF153416 AF153418 NM_018424 NM_019114	136999	-	TSC_hg19_v1_chr9_-_112083330 AB032179	137277	-	AK296265 AK296388 AK316118 NM_001145371 NM_001145372	245200	-	AF155065|C9orf4|23732|chromosome 9 open reading frame 4##NM_014334|C9orf4|23732|chromosome 9 open reading frame 4##AF153415|C9orf5|23731|chromosome 9 open reading frame 5##NM_032012|C9orf5|23731|chromosome 9 open reading frame 5##AK299952|C9orf5|23731|chromosome 9 open reading frame 5##AF153416|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF153418|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_018424|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_019114|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AB032179|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	0.981143	CTCF.p2:-6:0.981
chr9	118646150	118646295	reg1021997.p1	6.746	+	AB022761 NM_017418	-742126	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-765749	-	AK313619 NM_001244 NM_001252290	-953348	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	269848	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	803240	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	803384	+	AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32	0.970901	CTCF.p2:-19:0.971
chr19	29201329	29201466	reg1020877.p1	6.745	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-916469	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-916564	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-917009	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	502663	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	502724	-	NM_001146339	816093	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.982444	CTCF.p2:12:0.982
chr3	182627142	182627292	reg1020393.p2	6.745	+	TSC_hg19_v1_chr3_+_182511414 AB527450	-115738	+	TSC_hg19_v1_chr3_+_182511375 AF156548	-115828	+	AK296750 TSC_hg19_v1_chr3_+_182511291	-115922	+	AF456425 AF456426 TSC_hg19_v1_chr3_-_182698327 AF292100 AK314480 BC009478 AK056335 AK297328 NM_020640	71112	-	AB587379 CU678606 TSC_hg19_v1_chr3_-_182817309 CR749608 AK316428 AB209737 AL442091 AK294882	190064	-	AK295293 TSC_hg19_v1_chr3_-_182817343 AK023051 AB029826 AF310339 BC004187 BC004214 AF310972 NM_020166	190133	-	AF156548|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF456425|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##AF456426|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##AF292100|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##AK314480|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##BC009478|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##AK056335|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##AK297328|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##NM_020640|DCUN1D1|54165|DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)##CR749608|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK316428|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AB209737|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AL442091|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK294882|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK295293|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK023051|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AB029826|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AF310339|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##BC004187|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##BC004214|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AF310972|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##NM_020166|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)	0.0	
chr4	6676520	6676646	reg1019646.p1	6.745	+	TSC_hg19_v1_chr4_+_6675801 AK026375 AK314832 BC026970 BC006130 BC021542 BC073972	-726	+	TSC_hg19_v1_chr4_+_6675674 BC066911	-895	+	TSC_hg19_v1_chr4_+_6642416 AK057736 AK300242 AK074496 AK303974 AK129651 BC022797 NM_033296 CR457144 DQ892793 DQ896040	-34098	+	NM_005980 BC006819 TSC_hg19_v1_chr4_+_6695603 AY423724 X65614 DQ891088 DQ894270 AB590175 CU675465 BT007289	19029	+	TSC_hg19_v1_chr4_-_6711575 BC008087 AF258591	34974	-	TSC_hg19_v1_chr4_-_6711582 AK312676	35004	-	AK026375|LOC93622|93622|Morf4 family associated protein 1-like 1 pseudogene##AK314832|LOC93622|93622|Morf4 family associated protein 1-like 1 pseudogene##BC026970|LOC93622|93622|Morf4 family associated protein 1-like 1 pseudogene##BC006130|LOC93622|93622|Morf4 family associated protein 1-like 1 pseudogene##BC021542|LOC93622|93622|Morf4 family associated protein 1-like 1 pseudogene##BC073972|LOC93622|93622|Morf4 family associated protein 1-like 1 pseudogene##BC066911|LOC93622|93622|Morf4 family associated protein 1-like 1 pseudogene##AK057736|MRFAP1|93621|Morf4 family associated protein 1##AK300242|MRFAP1|93621|Morf4 family associated protein 1##AK074496|MRFAP1|93621|Morf4 family associated protein 1##AK303974|MRFAP1|93621|Morf4 family associated protein 1##AK129651|MRFAP1|93621|Morf4 family associated protein 1##BC022797|MRFAP1|93621|Morf4 family associated protein 1##NM_033296|MRFAP1|93621|Morf4 family associated protein 1##CR457144|MRFAP1|93621|Morf4 family associated protein 1##DQ892793|MRFAP1|93621|Morf4 family associated protein 1##DQ896040|MRFAP1|93621|Morf4 family associated protein 1##NM_005980|S100P|6286|S100 calcium binding protein P##BC006819|S100P|6286|S100 calcium binding protein P##AY423724|S100P|6286|S100 calcium binding protein P##X65614|S100P|6286|S100 calcium binding protein P##DQ891088|S100P|6286|S100 calcium binding protein P##DQ894270|S100P|6286|S100 calcium binding protein P##BT007289|S100P|6286|S100 calcium binding protein P##BC008087|MRFAP1L1|114932|Morf4 family associated protein 1-like 1##AF258591|MRFAP1L1|114932|Morf4 family associated protein 1-like 1##AK312676|MRFAP1L1|114932|Morf4 family associated protein 1-like 1	0.882175	CTCF.p2:29:0.882
chr12	54397928	54398040	reg1019742.p1	6.744	+	NM_006897 BC053894 AK315194 AK000445 AB464582 CU691056 BC032769	-4059	+	AK313759 NM_017409 BC001293 AB464578 AF255675 BT009921	-18998	+	NM_014212 AK291946 BC001543 AJ000041 CU674756	-31017	+	TSC_hg19_v1_chr12_+_54402796 BC053898 NM_022658 AK290959	4862	+	NM_014620 NM_153693 TSC_hg19_v1_chr12_+_54410671 X07495	12693	+	BC034922 BC044635 M16938 TSC_hg19_v1_chr12_+_54410917 AK314829	12940	+	NM_006897|HOXC9|3225|homeobox C9##BC053894|HOXC9|3225|homeobox C9##AK315194|HOXC9|3225|homeobox C9##AK000445|HOXC9|3225|homeobox C9##BC032769|HOXC9|3225|homeobox C9##AK313759|HOXC10|3226|homeobox C10##NM_017409|HOXC10|3226|homeobox C10##BC001293|HOXC10|3226|homeobox C10##AF255675|HOXC10|3226|homeobox C10##BT009921|HOXC10|3226|homeobox C10##NM_014212|HOXC11|3227|homeobox C11##AK291946|HOXC11|3227|homeobox C11##BC001543|HOXC11|3227|homeobox C11##AJ000041|HOXC11|3227|homeobox C11##BC053898|HOXC8|3224|homeobox C8##NM_022658|HOXC8|3224|homeobox C8##AK290959|HOXC8|3224|homeobox C8##NM_014620|HOXC4|3221|homeobox C4##NM_153693|HOXC6|3223|homeobox C6##X07495|HOXC4|3221|homeobox C4##BC034922|HOXC5|3222|homeobox C5##BC044635|HOXC5|3222|homeobox C5##M16938|HOXC6|3223|homeobox C6##AK314829|HOXC6|3223|homeobox C6	0.93415	CTCF.p2:18:0.934
chr13	46734727	46734860	reg1021613.p1	6.744	+	AB590176 BT006936 DQ890567 EU176478 TSC_hg19_v1_chr13_-_46679154 CU675521 AK290829 AB011969 M75106 BC007057 NM_001872 NM_016413	-55617	-	TSC_hg19_v1_chr13_+_46626953 AK095119 AK124928	-107822	+	BC019000 TSC_hg19_v1_chr13_-_46626864 AK056422 AY283618 NM_015070	-107910	-	TSC_hg19_v1_chr13_-_46742711 CR936795	7902	-	TSC_hg19_v1_chr13_-_46756291 J02923	21499	-	TSC_hg19_v1_chr13_-_46756297 BC007673 AB208984 AK312393	21515	-	BT006936|CPB2|1361|carboxypeptidase B2 (plasma)##DQ890567|CPB2|1361|carboxypeptidase B2 (plasma)##EU176478|CPB2|1361|carboxypeptidase B2 (plasma)##AK290829|CPB2|1361|carboxypeptidase B2 (plasma)##AB011969|CPB2|1361|carboxypeptidase B2 (plasma)##M75106|CPB2|1361|carboxypeptidase B2 (plasma)##BC007057|CPB2|1361|carboxypeptidase B2 (plasma)##NM_001872|CPB2|1361|carboxypeptidase B2 (plasma)##NM_016413|CPB2|1361|carboxypeptidase B2 (plasma)##AK095119|LOC100509894|100509894|uncharacterized LOC100509894##AK124928|LOC100509894|100509894|uncharacterized LOC100509894##BC019000|ZC3H13|23091|zinc finger CCCH-type containing 13##AK056422|ZC3H13|23091|zinc finger CCCH-type containing 13##AY283618|ZC3H13|23091|zinc finger CCCH-type containing 13##NM_015070|ZC3H13|23091|zinc finger CCCH-type containing 13##CR936795|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##BC007673|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AB208984|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##AK312393|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)	0.998018	CTCF.p2:13:0.998
chr20	43951738	43951848	reg1021605.p1	6.744	+	BC151219 AK074595 BC141811 AK074597 NM_003833 NM_030590 NM_030592	-14851	-	NM_014276 AB024964 AB026048 AB027710	-16267	+	AF114471 X04503 AB464192 DQ891365 DQ894545 AK312192 X04470 TSC_hg19_v1_chr20_-_43883206 AX772818 BC020708 NM_003064	-68598	-	CR542045 CR542074 DQ890718 DQ893898 AB464261 TSC_hg19_v1_chr20_-_43977065 X67016 AK222695 AK223243 AK303964 AK312507 BC030805 D13292 NM_002999	25262	-	NM_001197129	38783	+	NM_001099791 NM_033542 TSC_hg19_v1_chr20_+_43991822 AK075264 AK172738 AX775821 BC048286 BC023562 AL591714 AK309429	40024	+	BC151219|MATN4|8785|matrilin 4##AK074595|MATN4|8785|matrilin 4##BC141811|MATN4|8785|matrilin 4##AK074597|MATN4|8785|matrilin 4##NM_003833|MATN4|8785|matrilin 4##NM_030590|MATN4|8785|matrilin 4##NM_030592|MATN4|8785|matrilin 4##NM_014276|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB024964|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB026048|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB027710|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AF114471|SLPI|6590|secretory leukocyte peptidase inhibitor##X04503|SLPI|6590|secretory leukocyte peptidase inhibitor##DQ891365|SLPI|6590|secretory leukocyte peptidase inhibitor##DQ894545|SLPI|6590|secretory leukocyte peptidase inhibitor##AK312192|SLPI|6590|secretory leukocyte peptidase inhibitor##X04470|SLPI|6590|secretory leukocyte peptidase inhibitor##AX772818|SLPI|6590|secretory leukocyte peptidase inhibitor##BC020708|SLPI|6590|secretory leukocyte peptidase inhibitor##NM_003064|SLPI|6590|secretory leukocyte peptidase inhibitor##CR542045|SDC4|6385|syndecan 4##CR542074|SDC4|6385|syndecan 4##DQ890718|SDC4|6385|syndecan 4##DQ893898|SDC4|6385|syndecan 4##X67016|SDC4|6385|syndecan 4##AK222695|SDC4|6385|syndecan 4##AK223243|SDC4|6385|syndecan 4##AK303964|SDC4|6385|syndecan 4##AK312507|SDC4|6385|syndecan 4##BC030805|SDC4|6385|syndecan 4##D13292|SDC4|6385|syndecan 4##NM_002999|SDC4|6385|syndecan 4##NM_001197129|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_001099791|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_033542|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK075264|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK172738|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC048286|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC023562|SYS1-DBNDD2|767557|SYS1-DBNDD2 readthrough##AL591714|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK309429|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	0.150812	
chr6	14129894	14130035	reg1020715.p2	6.744	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-11942	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-12059	+	NM_001251901	-12478	+	TSC_hg19_v1_chr6_+_15245702 AK302624	1115753	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	1116448	+	BC033996 TSC_hg19_v1_chr6_-_15248900	1118937	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.619536	CTCF.p2:-12:0.620
chr7	44236079	44236215	reg1021847.p2	6.744	+	M88011 M90299 BC001890 NM_000162	-7197	-	M69051 AK122876 NM_033507 NM_033508	-37268	-	BC027915 NM_021223 TSC_hg19_v1_chr7_-_44180929 AK311869	-55226	-	TSC_hg19_v1_chr7_+_44240564 AK299158	4413	+	TSC_hg19_v1_chr7_+_44240576 NM_006555 AK312622	4431	+	TSC_hg19_v1_chr7_+_44240631 AK223488	4473	+	M88011|GCK|2645|glucokinase (hexokinase 4)##M90299|GCK|2645|glucokinase (hexokinase 4)##BC001890|GCK|2645|glucokinase (hexokinase 4)##NM_000162|GCK|2645|glucokinase (hexokinase 4)##M69051|GCK|2645|glucokinase (hexokinase 4)##AK122876|GCK|2645|glucokinase (hexokinase 4)##NM_033507|GCK|2645|glucokinase (hexokinase 4)##NM_033508|GCK|2645|glucokinase (hexokinase 4)##BC027915|MYL7|58498|myosin, light chain 7, regulatory##NM_021223|MYL7|58498|myosin, light chain 7, regulatory##AK311869|MYL7|58498|myosin, light chain 7, regulatory##AK299158|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##NM_006555|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK312622|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK223488|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)	0.0	
chr1	150227896	150228011	reg1012264.p1	6.743	+	TSC_hg19_v1_chr1_-_150208505 AL832674 NM_001136478 NM_030920	-19461	-	AY057381 TSC_hg19_v1_chr1_-_150208461 AK092672 AX747663	-19502	-	AB528764 AM393076 AL833660 TSC_hg19_v1_chr1_-_150208332 AK303333 BC003380 AL832664 AK303392 AK223469	-19686	-	AK074765 AK315469 AB025904 NM_012113 AK308964 AY358689 AK295341 BC034412 AK290609	2280	+	CU676022 AF508787 AY113698 AY113699 AF151835 AK075295 AX775955 BC017699 TSC_hg19_v1_chr1_-_150241368 BC008732 BC001230 BC015568 AK297680 AK298876 AK027879 AK314490 AX775957 BC020590 BC009501	13351	-	TSC_hg19_v1_chr1_-_150241417 AY358951 AK300640 AK075452 AK298832 AK307358 NM_001077628 NM_001243771 NM_001243772 NM_016022	13555	-	AL832674|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##NM_001136478|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##NM_030920|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AY057381|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK092672|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AM393076|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL833660|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303333|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##BC003380|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL832664|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303392|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK223469|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK074765|CA14|23632|carbonic anhydrase XIV##AK315469|CA14|23632|carbonic anhydrase XIV##AB025904|CA14|23632|carbonic anhydrase XIV##NM_012113|CA14|23632|carbonic anhydrase XIV##AY358689|CA14|23632|carbonic anhydrase XIV##AK295341|CA14|23632|carbonic anhydrase XIV##BC034412|CA14|23632|carbonic anhydrase XIV##AK290609|CA14|23632|carbonic anhydrase XIV##AF508787|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AY113698|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AY113699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AF151835|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK075295|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AX775955|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC017699|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC008732|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC001230|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC015568|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK297680|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK298876|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK027879|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK314490|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AX775957|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC020590|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##BC009501|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AY358951|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK300640|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK075452|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK298832|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##AK307358|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##NM_001077628|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##NM_001243771|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##NM_001243772|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)##NM_016022|APH1A|51107|anterior pharynx defective 1 homolog A (C. elegans)	0.807426	CTCF.p2:-19:0.807
chr6	40967375	40967517	reg1020415.p1	6.743	+	BC142616 AB033072 NM_020737 AK291474	-412302	-	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-1065232	-	AB527188 AJ224328 NM_005943	-1072061	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	39503	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	42900	+	AK223461 AK308197 AK310006 AK313288 NM_006789 BC047767 AF161698 BC069688 BC069764 AK300689	53553	+	BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2##AK223461|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK308197|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK310006|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK313288|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##NM_006789|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC047767|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AF161698|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069688|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069764|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK300689|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2	0.441135	CTCF.p2:14:0.441
chr6	90077934	90078083	reg1023245.p1	6.743	+	TSC_hg19_v1_chr6_-_90062622 NM_016021	-15221	-	TSC_hg19_v1_chr6_-_90062559 AK290574 BC013973	-15493	-	TSC_hg19_v1_chr6_-_90062439 AK223464 AK300629	-15568	-	BC003088 AF272036 AL137502 TSC_hg19_v1_chr6_-_90121800	43732	-	TSC_hg19_v1_chr6_-_90121945 AK289799	43920	-	TSC_hg19_v1_chr6_-_90121986 NM_021244	44116	-	NM_016021|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AK290574|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##BC013973|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AK223464|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AK300629|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##BC003088|RRAGD|58528|Ras-related GTP binding D##AF272036|RRAGD|58528|Ras-related GTP binding D##AL137502|RRAGD|58528|Ras-related GTP binding D##AK289799|RRAGD|58528|Ras-related GTP binding D##NM_021244|RRAGD|58528|Ras-related GTP binding D	0.998181	CTCF.p2:5:0.998
chr16	29193281	29193391	reg1019606.p1	6.741	+	TSC_hg19_v1_chr16_+_29086310 BC042920 AK225670 AK298442 AK301253	-107031	+	AK307342 NM_001014987 NM_001014988 NM_014387 TSC_hg19_v1_chr16_+_28996403 AJ223280	-196938	+	BC011563 NM_001014989	-197190	+	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	272515	+	BC022832 NM_001031827 NM_001039182	272948	-	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	277890	+	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK307342|LAT|27040|linker for activation of T cells##NM_001014987|LAT|27040|linker for activation of T cells##NM_001014988|LAT|27040|linker for activation of T cells##NM_014387|LAT|27040|linker for activation of T cells##AJ223280|LAT|27040|linker for activation of T cells##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3	0.998565	CTCF.p2:-1:0.999
chr4	77973566	77973666	reg1018446.p1	6.741	+	AK124592 CR627457 TSC_hg19_v1_chr4_+_77954068	-19611	+	TSC_hg19_v1_chr4_+_77871005 AK001711 AL110300 AK302700 BC063615 GU727629 AB587498	-102616	+	TSC_hg19_v1_chr4_+_77870908 BC064934	-102704	+	TSC_hg19_v1_chr4_-_77997145 BC000420 BC004975 NM_006835 AB209766 AK301111 AK312632	23536	-	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	104745	+	TSC_hg19_v1_chr4_+_78078398 U47414	104844	+	AK124592|SEPT11|55752|septin 11##AK001711|SEPT11|55752|septin 11##AL110300|SEPT11|55752|septin 11##AK302700|SEPT11|55752|septin 11##BC063615|SEPT11|55752|septin 11##GU727629|SEPT11|55752|septin 11##BC064934|SEPT11|55752|septin 11##BC000420|CCNI|10983|cyclin I##BC004975|CCNI|10983|cyclin I##NM_006835|CCNI|10983|cyclin I##AB209766|CCNI|10983|cyclin I##AK301111|CCNI|10983|cyclin I##AK312632|CCNI|10983|cyclin I##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2	0.976693	CTCF.p2:3:0.977
chr7	74460628	74460754	reg1021975.p1	6.741	+	BC147030 BC147031 NM_001145063	-81611	+	BC052588 TSC_hg19_v1_chr7_+_74306933 BC027480 D38436 D38502 AK309660	-153771	+	TSC_hg19_v1_chr7_-_74306725 BC095487	-153970	-	AB463349 AF410455 AM392683 DQ893169 TSC_hg19_v1_chr7_-_74489627 AL136804 AK309117 BC007823 BC019008	28911	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	28947	-	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	29001	-	BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##NM_001145063|GATSL1|389523|GATS protein-like 1##BC052588|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##BC027480|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##D38436|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##D38502|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##AK309660|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##AF410455|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AM392683|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##DQ893169|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AL136804|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK309117|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC007823|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC019008|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16	0.96233	CTCF.p2:-5:0.962
chr10	94725121	94725255	reg1020876.p2	6.740	+	AK293857 NM_019053 AF220217 TSC_hg19_v1_chr10_+_94608276 AL832501 EF571007 AK315544 BC028395 CU688490 EU832839 GQ129240	-116931	+	NM_001013848	-130719	+	TSC_hg19_v1_chr10_+_94449711 NM_002729 AK309463 AK314891 BC014336 BC015110 L16499 X67235 AB528006 BC050638 EU446478	-275479	+	AY356349 NM_183374	95832	+	AK027560 NM_057157	108043	+	AK075374 NM_000783 AF005418	108468	+	AK293857|EXOC6|54536|exocyst complex component 6##NM_019053|EXOC6|54536|exocyst complex component 6##AF220217|EXOC6|54536|exocyst complex component 6##AL832501|EXOC6|54536|exocyst complex component 6##EF571007|EXOC6|54536|exocyst complex component 6##AK315544|EXOC6|54536|exocyst complex component 6##BC028395|EXOC6|54536|exocyst complex component 6##EU832839|EXOC6|54536|exocyst complex component 6##GQ129240|EXOC6|54536|exocyst complex component 6##NM_001013848|EXOC6|54536|exocyst complex component 6##NM_002729|HHEX|3087|hematopoietically expressed homeobox##AK314891|HHEX|3087|hematopoietically expressed homeobox##BC014336|HHEX|3087|hematopoietically expressed homeobox##BC015110|HHEX|3087|hematopoietically expressed homeobox##L16499|HHEX|3087|hematopoietically expressed homeobox##X67235|HHEX|3087|hematopoietically expressed homeobox##BC050638|HHEX|3087|hematopoietically expressed homeobox##EU446478|HHEX|3087|hematopoietically expressed homeobox##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1	0.999234	CTCF.p2:-22:0.999
chr13	114105333	114105453	reg1019865.p1	6.740	+	TSC_hg19_v1_chr13_-_114103452 BC009755 NM_199162	-1939	-	AB449887 TSC_hg19_v1_chr13_-_114018427 AK300897 BC080640 AK309959 NM_024719	-86973	-	BC062461 TSC_hg19_v1_chr13_-_114018273	-87156	-	AJ313429 NM_138430	2445	-	TSC_hg19_v1_chr13_-_114145027 AK000099 AK001566 BC056669 NM_001014283	39627	-	NM_017905 BC068515 TSC_hg19_v1_chr13_+_114145348 BC012564	39950	+	BC009755|ADPRHL1|113622|ADP-ribosylhydrolase like 1##NM_199162|ADPRHL1|113622|ADP-ribosylhydrolase like 1##AB449887|GRTP1|79774|growth hormone regulated TBC protein 1##AK300897|GRTP1|79774|growth hormone regulated TBC protein 1##BC080640|GRTP1|79774|growth hormone regulated TBC protein 1##AK309959|GRTP1|79774|growth hormone regulated TBC protein 1##NM_024719|GRTP1|79774|growth hormone regulated TBC protein 1##BC062461|GRTP1|79774|growth hormone regulated TBC protein 1##AJ313429|ADPRHL1|113622|ADP-ribosylhydrolase like 1##NM_138430|ADPRHL1|113622|ADP-ribosylhydrolase like 1##AK000099|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##AK001566|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##BC056669|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##NM_001014283|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##NM_017905|TMCO3|55002|transmembrane and coiled-coil domains 3##BC068515|TMCO3|55002|transmembrane and coiled-coil domains 3##BC012564|TMCO3|55002|transmembrane and coiled-coil domains 3	0.788062	CTCF.p2:7:0.788
chr20	9893635	9893743	reg1021327.p2	6.740	+	TSC_hg19_v1_chr20_-_9819519 AB040812 BC024179 AK291401 AK307926 AK095674 AK315820 NM_020341 NM_177990 AB033090 AX776013	-74122	-	TSC_hg19_v1_chr20_+_9495437 CU690786	-398227	+	AL121740 BC050727 TSC_hg19_v1_chr20_+_9495326	-398377	+	NM_022096 NM_198798 AK097689 TSC_hg19_v1_chr20_+_10015744 BC022878 BC028189 BC011591	122043	+	TSC_hg19_v1_chr20_+_10199575 NM_003081 NM_130811 AK094560 AK098347 D21267 AK223617 AK314359 AK289647 BC010647 BX647443 AK098767 L19760 L19761	305838	+	TSC_hg19_v1_chr20_-_10200139 AK124961	306454	-	AB040812|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##BC024179|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK291401|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK307926|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK095674|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK315820|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_020341|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_177990|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AB033090|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AX776013|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AL121740|LAMP5|24141|lysosomal-associated membrane protein family, member 5##BC050727|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_022096|ANKRD5|63926|ankyrin repeat domain 5##NM_198798|ANKRD5|63926|ankyrin repeat domain 5##AK097689|ANKRD5|63926|ankyrin repeat domain 5##BC022878|ANKRD5|63926|ankyrin repeat domain 5##BC028189|ANKRD5|63926|ankyrin repeat domain 5##BC011591|ANKRD5|63926|ankyrin repeat domain 5##NM_003081|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_130811|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK094560|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098347|SNAP25|6616|synaptosomal-associated protein, 25kDa##D21267|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK223617|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK314359|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK289647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BC010647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BX647443|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098767|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19760|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19761|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK124961|LOC100131208|100131208|uncharacterized LOC100131208	0.178096	
chr7	128099502	128099602	reg1018112.p2	6.740	+	TSC_hg19_v1_chr7_+_128095931 NM_001098786 NM_013332 AF144755 AK024729 AK222583 BC008573 BC001863 BC093742 BC112183	-3586	+	TSC_hg19_v1_chr7_-_128050037 AK092452 BC033622 AK054667 AK122994 NM_000883 NM_001102605 NM_001142576 NM_183243	-49515	-	AK131294 TSC_hg19_v1_chr7_-_128049984 CR933672	-49572	-	NM_018396 TSC_hg19_v1_chr7_+_128116813 AK302775 BC107586 AK002212 BC064929 BC121115 BC121116 AK299960	17285	+	BC066973 NM_001012454 NM_001128926 BC105729 BC105730 BC105731 BC047310	212794	+	TSC_hg19_v1_chr7_+_128349114 AK093161 AK302221 AX747964 BC040906 AK310426	249575	+	NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated##AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK092452|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC033622|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054667|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK122994|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_000883|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001102605|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142576|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_183243|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK131294|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##CR933672|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_018396|METTL2B|55798|methyltransferase like 2B##AK302775|METTL2B|55798|methyltransferase like 2B##BC107586|METTL2B|55798|methyltransferase like 2B##AK002212|METTL2B|55798|methyltransferase like 2B##BC064929|METTL2B|55798|methyltransferase like 2B##BC121115|METTL2B|55798|methyltransferase like 2B##BC121116|METTL2B|55798|methyltransferase like 2B##AK299960|METTL2B|55798|methyltransferase like 2B##BC066973|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001012454|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001128926|FAM71F2|346653|family with sequence similarity 71, member F2##BC105729|FAM71F2|346653|family with sequence similarity 71, member F2##BC105730|FAM71F2|346653|family with sequence similarity 71, member F2##BC105731|FAM71F2|346653|family with sequence similarity 71, member F2##BC047310|FAM71F2|346653|family with sequence similarity 71, member F2##AK093161|FAM71F1|84691|family with sequence similarity 71, member F1##AK302221|FAM71F1|84691|family with sequence similarity 71, member F1##BC040906|FAM71F1|84691|family with sequence similarity 71, member F1##AK310426|FAM71F1|84691|family with sequence similarity 71, member F1	0.955079	CTCF.p2:3:0.955
chr11	11252780	11252931	reg1019469.p2	6.739	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-373069	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-373337	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-422058	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	390723	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	610161	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	610636	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.0	
chr12	96456953	96457068	reg1021449.p1	6.739	+	AK301308 TSC_hg19_v1_chr12_-_96429399 AK310522 AK293630	-27595	-	CR457068 AB590523 AB209740 J02959 TSC_hg19_v1_chr12_-_96429366 BC032528 J03459 NM_000895 AK308184	-27677	-	BC096096 BC096097 BC096098 BC096099 D16626 AK303544 NM_002108 AK298736 AK297004 TSC_hg19_v1_chr12_-_96390137	-66936	-	TSC_hg19_v1_chr12_+_96588154 NM_005230 Z36715 AK312694	131116	+	TSC_hg19_v1_chr12_+_96588254 BC017371	131257	+	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	336973	-	AK301308|LTA4H|4048|leukotriene A4 hydrolase##AK293630|LTA4H|4048|leukotriene A4 hydrolase##CR457068|LTA4H|4048|leukotriene A4 hydrolase##AB209740|LTA4H|4048|leukotriene A4 hydrolase##J02959|LTA4H|4048|leukotriene A4 hydrolase##BC032528|LTA4H|4048|leukotriene A4 hydrolase##J03459|LTA4H|4048|leukotriene A4 hydrolase##NM_000895|LTA4H|4048|leukotriene A4 hydrolase##AK308184|LTA4H|4048|leukotriene A4 hydrolase##BC096096|HAL|3034|histidine ammonia-lyase##BC096097|HAL|3034|histidine ammonia-lyase##BC096098|HAL|3034|histidine ammonia-lyase##BC096099|HAL|3034|histidine ammonia-lyase##D16626|HAL|3034|histidine ammonia-lyase##AK303544|HAL|3034|histidine ammonia-lyase##NM_002108|HAL|3034|histidine ammonia-lyase##AK298736|HAL|3034|histidine ammonia-lyase##AK297004|HAL|3034|histidine ammonia-lyase##NM_005230|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##Z36715|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK312694|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17	0.864335	CTCF.p2:5:0.864
chr14	52340030	52340210	reg1019782.p1	6.739	+	TSC_hg19_v1_chr14_+_52327416 BC020774	-12684	+	TSC_hg19_v1_chr14_+_52327387 AL832878	-12728	+	AK001024 AK311334 TSC_hg19_v1_chr14_+_52327363	-12756	+	AF087877 AF100755 AF151857 DQ525179 NM_016039 TSC_hg19_v1_chr14_+_52456231 AK312004 BC001722	116134	+	TSC_hg19_v1_chr14_+_52456323 EU446806 AB463506 AY817175	116219	+	AJ223500 D86425 AB385187 CU690132 TSC_hg19_v1_chr14_-_52535721	195602	-	BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AL832878|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AF087877|C14orf166|51637|chromosome 14 open reading frame 166##AF100755|C14orf166|51637|chromosome 14 open reading frame 166##AF151857|C14orf166|51637|chromosome 14 open reading frame 166##DQ525179|C14orf166|51637|chromosome 14 open reading frame 166##NM_016039|C14orf166|51637|chromosome 14 open reading frame 166##AK312004|C14orf166|51637|chromosome 14 open reading frame 166##BC001722|C14orf166|51637|chromosome 14 open reading frame 166##EU446806|C14orf166|51637|chromosome 14 open reading frame 166##AY817175|C14orf166|51637|chromosome 14 open reading frame 166##AJ223500|NID2|22795|nidogen 2 (osteonidogen)##D86425|NID2|22795|nidogen 2 (osteonidogen)	0.0	
chr16	29819035	29819154	reg1020522.p1	6.739	+	L01420 BC041629 AB209061 TSC_hg19_v1_chr16_+_29818849	-319	+	TSC_hg19_v1_chr16_+_29817813 D85131 NM_001042539 NM_002383 U33819 AF489858 M93339 M94046 AB590469 EF059746	-1178	+	FJ532357 TSC_hg19_v1_chr16_+_29817510	-1626	+	NM_145239 TSC_hg19_v1_chr16_+_29823510 AK292393 AK074572 AK225785 BC011405 AK098379	4379	+	TSC_hg19_v1_chr16_+_29823563 AK092265 AX747441 AL834185 BC053594	4490	+	TSC_hg19_v1_chr16_+_29827522 NM_024516	8422	+	L01420|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##BC041629|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##AB209061|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##D85131|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##NM_001042539|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##NM_002383|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##U33819|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##AF489858|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##M93339|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##M94046|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##EF059746|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##FJ532357|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##NM_145239|PRRT2|112476|proline-rich transmembrane protein 2##AK292393|PRRT2|112476|proline-rich transmembrane protein 2##AK074572|PRRT2|112476|proline-rich transmembrane protein 2##AK225785|PRRT2|112476|proline-rich transmembrane protein 2##BC011405|PRRT2|112476|proline-rich transmembrane protein 2##AK098379|PRRT2|112476|proline-rich transmembrane protein 2##AK092265|PRRT2|112476|proline-rich transmembrane protein 2##AL834185|PRRT2|112476|proline-rich transmembrane protein 2##BC053594|PRRT2|112476|proline-rich transmembrane protein 2##NM_024516|C16orf53|79447|chromosome 16 open reading frame 53	0.0	
chr1	203275820	203275970	reg1023190.p1	6.738	+	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	-1206	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-77080	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-119969	-	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	41489	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	44314	-	AK172740 TSC_hg19_v1_chr1_-_203320256	44366	-	NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.376015	CTCF.p2:-3:0.376
chr12	4146952	4147082	reg1022221.p1	6.738	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-164517	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-284635	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-284749	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	236027	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	283374	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	341783	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.963033	CTCF.p2:19:0.963
chr19	29228043	29228169	reg1019021.p1	6.738	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-943178	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-943273	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-943718	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	475954	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	476015	-	NM_001146339	789384	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.992529	CTCF.p2:17:0.993
chr8	101000	101104	reg1021138.p1	6.738	+	None	None	None	None	None	None	None	None	None	NM_001005504	15971	-	AK127000 TSC_hg19_v1_chr8_-_182246 BC064938 BC052779	81220	-	NM_173539 AK093442 AX748129 TSC_hg19_v1_chr8_+_182396 AK313454 NM_001042415 NM_001042416 BC026190	81290	+	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21##AK127000|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC064938|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC052779|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##NM_173539|ZNF596|169270|zinc finger protein 596##AK313454|ZNF596|169270|zinc finger protein 596##NM_001042415|ZNF596|169270|zinc finger protein 596##NM_001042416|ZNF596|169270|zinc finger protein 596##BC026190|ZNF596|169270|zinc finger protein 596	0.283133	CTCF.p2:14:0.283
chrX	16156287	16156405	reg1020515.p1	6.738	+	NM_005314	-14923	+	TSC_hg19_v1_chrX_-_15873104 NM_003916	-283243	-	AK130075 TSC_hg19_v1_chrX_-_15872938	-283408	-	L13220 NM_004057 X65869 BC112174	511951	+	AK125332 NM_001144002	573993	-	TSC_hg19_v1_chrX_-_16730802 NM_175859 BC034986 AK125348 AF226667 AK024070 AK023549 NM_019857	574517	-	NM_005314|GRPR|2925|gastrin-releasing peptide receptor##NM_003916|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##L13220|S100G|795|S100 calcium binding protein G##NM_004057|S100G|795|S100 calcium binding protein G##X65869|S100G|795|S100 calcium binding protein G##BC112174|S100G|795|S100 calcium binding protein G##AK125332|CTPS2|56474|CTP synthase II##NM_001144002|CTPS2|56474|CTP synthase II##NM_175859|CTPS2|56474|CTP synthase II##BC034986|CTPS2|56474|CTP synthase II##AK125348|CTPS2|56474|CTP synthase II##AF226667|CTPS2|56474|CTP synthase II##AK024070|CTPS2|56474|CTP synthase II##AK023549|CTPS2|56474|CTP synthase II##NM_019857|CTPS2|56474|CTP synthase II	0.338687	CTCF.p2:5:0.339
chrX	54852626	54852737	reg1023135.p1	6.738	+	NM_201222 BX647995 TSC_hg19_v1_chrX_+_54835530	-17168	+	TSC_hg19_v1_chrX_+_54834810 NM_014599 AK098645 BC000304 AK301599	-17874	+	TSC_hg19_v1_chrX_+_54834177 NM_177433 AK297910 AK092463 AX747558 AF126181 AF128527 AF128528 AK301821 U92544 BC091503	-18525	+	AK299568 AF349719 AF349720 AF349721 AF349722 NM_001039705 NM_016157 NM_177556 AK027489 AK296329 BC026914 AB029037 TSC_hg19_v1_chrX_+_54947283 AK225841	94576	+	BC096077 BC096078 BC096079 NM_002625 X52638	167829	-	TSC_hg19_v1_chrX_+_55026795 NM_014481 AF119046 AJ011311 AB021260 AK301555 AK316186 BC002959 BC007669 AB049211 AB463412 DQ893669 DQ895556	174136	+	NM_201222|MAGED2|10916|melanoma antigen family D, 2##BX647995|MAGED2|10916|melanoma antigen family D, 2##NM_014599|MAGED2|10916|melanoma antigen family D, 2##AK098645|MAGED2|10916|melanoma antigen family D, 2##BC000304|MAGED2|10916|melanoma antigen family D, 2##AK301599|MAGED2|10916|melanoma antigen family D, 2##NM_177433|MAGED2|10916|melanoma antigen family D, 2##AK297910|MAGED2|10916|melanoma antigen family D, 2##AK092463|MAGED2|10916|melanoma antigen family D, 2##AF126181|MAGED2|10916|melanoma antigen family D, 2##AF128527|MAGED2|10916|melanoma antigen family D, 2##AF128528|MAGED2|10916|melanoma antigen family D, 2##AK301821|MAGED2|10916|melanoma antigen family D, 2##U92544|MAGED2|10916|melanoma antigen family D, 2##BC091503|MAGED2|10916|melanoma antigen family D, 2##AK299568|TRO|7216|trophinin##AF349719|TRO|7216|trophinin##AF349720|TRO|7216|trophinin##AF349721|TRO|7216|trophinin##AF349722|TRO|7216|trophinin##NM_001039705|TRO|7216|trophinin##NM_016157|TRO|7216|trophinin##NM_177556|TRO|7216|trophinin##AK027489|TRO|7216|trophinin##AK296329|TRO|7216|trophinin##BC026914|TRO|7216|trophinin##AB029037|TRO|7216|trophinin##AK225841|TRO|7216|trophinin##BC096077|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##BC096078|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##BC096079|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##NM_002625|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##X52638|PFKFB1|5207|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1##NM_014481|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AF119046|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AJ011311|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AB021260|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AK301555|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AK316186|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##BC002959|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##AB049211|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##DQ893669|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2##DQ895556|APEX2|27301|APEX nuclease (apurinic/apyrimidinic endonuclease) 2	0.999867	CTCF.p2:-7:1.000
chr15	78774807	78774959	reg1025322.p1	6.737	+	TSC_hg19_v1_chr15_+_78730595 AB209403 BC017880 AK292992 BC117481 BC117483 BC143948 AB586699 HQ258663 M58511	-44260	+	TSC_hg19_v1_chr15_+_78730557 NM_004136	-44362	+	TSC_hg19_v1_chr15_+_78632694 NM_004378 AB593091 BC022069 S74445 DQ896830 EU176284 CR457017 AL110113	-142180	+	TSC_hg19_v1_chr15_+_78799930 NM_001013619 NM_001083612 AK126453 BC132753 BC144383	25044	+	NM_001102667 NM_001102668 NM_002789 TSC_hg19_v1_chr15_+_78832785 BC005361 AK055714 AK315526	57882	+	TSC_hg19_v1_chr15_+_78832790 D28362 BC030529 AL110100 BC022445 BC093069 BC047667 D00763	57933	+	AB209403|IREB2|3658|iron-responsive element binding protein 2##BC017880|IREB2|3658|iron-responsive element binding protein 2##AK292992|IREB2|3658|iron-responsive element binding protein 2##BC117481|IREB2|3658|iron-responsive element binding protein 2##BC117483|IREB2|3658|iron-responsive element binding protein 2##BC143948|IREB2|3658|iron-responsive element binding protein 2##HQ258663|IREB2|3658|iron-responsive element binding protein 2##M58511|IREB2|3658|iron-responsive element binding protein 2##NM_004136|IREB2|3658|iron-responsive element binding protein 2##NM_004378|CRABP1|1381|cellular retinoic acid binding protein 1##AB593091|CRABP1|1381|cellular retinoic acid binding protein 1##BC022069|CRABP1|1381|cellular retinoic acid binding protein 1##S74445|CRABP1|1381|cellular retinoic acid binding protein 1##DQ896830|CRABP1|1381|cellular retinoic acid binding protein 1##EU176284|CRABP1|1381|cellular retinoic acid binding protein 1##CR457017|CRABP1|1381|cellular retinoic acid binding protein 1##AL110113|CRABP1|1381|cellular retinoic acid binding protein 1##NM_001013619|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##NM_001083612|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##AK126453|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##BC132753|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##BC144383|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##NM_001102667|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##NM_001102668|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##NM_002789|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC005361|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##AK055714|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##AK315526|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##D28362|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC030529|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##AL110100|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC022445|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC093069|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC047667|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##D00763|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4	0.935904	CTCF.p2:0:0.936
chr15	89986035	89986182	reg1020269.p2	6.737	+	TSC_hg19_v1_chr15_-_89878042 AK291281	-108065	-	BC050559 BC042571 NM_001126131 NM_002693 X98093 TSC_hg19_v1_chr15_-_89878036	-108087	-	TSC_hg19_v1_chr15_+_89787255 AK055176 BC140769 BC144483 BC004277	-198858	+	CU689056 AY257182 AF193809 NM_016321 BC015461 AK298252 AK298641 AF081497 AK301640 AK313238 BC030965 AK290899 AK310222	53687	-	TSC_hg19_v1_chr15_+_90118742 GQ227787 NM_152259	132670	+	TSC_hg19_v1_chr15_-_90198681 BC042063 NM_198525	212512	-	AK291281|POLG|5428|polymerase (DNA directed), gamma##BC050559|POLG|5428|polymerase (DNA directed), gamma##BC042571|POLG|5428|polymerase (DNA directed), gamma##NM_001126131|POLG|5428|polymerase (DNA directed), gamma##NM_002693|POLG|5428|polymerase (DNA directed), gamma##X98093|POLG|5428|polymerase (DNA directed), gamma##AK055176|FANCI|55215|Fanconi anemia, complementation group I##BC140769|FANCI|55215|Fanconi anemia, complementation group I##BC144483|FANCI|55215|Fanconi anemia, complementation group I##BC004277|FANCI|55215|Fanconi anemia, complementation group I##AY257182|RHCG|51458|Rh family, C glycoprotein##AF193809|RHCG|51458|Rh family, C glycoprotein##NM_016321|RHCG|51458|Rh family, C glycoprotein##BC015461|RHCG|51458|Rh family, C glycoprotein##AK298252|RHCG|51458|Rh family, C glycoprotein##AK298641|RHCG|51458|Rh family, C glycoprotein##AF081497|RHCG|51458|Rh family, C glycoprotein##AK301640|RHCG|51458|Rh family, C glycoprotein##AK313238|RHCG|51458|Rh family, C glycoprotein##BC030965|RHCG|51458|Rh family, C glycoprotein##AK290899|RHCG|51458|Rh family, C glycoprotein##AK310222|RHCG|51458|Rh family, C glycoprotein##GQ227787|C15orf42|90381|chromosome 15 open reading frame 42##NM_152259|C15orf42|90381|chromosome 15 open reading frame 42##BC042063|KIF7|374654|kinesin family member 7##NM_198525|KIF7|374654|kinesin family member 7	0.776537	CTCF.p2:1:0.777
chr6	51379931	51380058	reg1021014.p2	6.737	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-593459	+	AY028376 NM_172238	-698738	+	DQ012016 NM_001037498	-1363631	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	572401	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	671212	+	AF384857 JF305974 AB590713 BC070124 NM_052872	729267	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.86763	CTCF.p2:6:0.868
chr8	11769446	11769546	reg1021478.p1	6.737	+	TSC_hg19_v1_chr8_-_11725628 NM_001908 NM_147780 NM_147781 NM_147782 NM_147783	-43798	-	TSC_hg19_v1_chr8_-_11725624 AK075393	-43872	-	AK092070 AK130184 AK290239 AK297687 BC095408 TSC_hg19_v1_chr8_-_11725597 AK296845 BX647952	-43899	-	AY621333 DQ012026 NM_001033018	62611	-	AY621332 DQ012025 NM_001033017	70333	+	AY621331 DQ012024 NM_001033019 BC130461 BC130463	84293	-	NM_001908|CTSB|1508|cathepsin B##NM_147780|CTSB|1508|cathepsin B##NM_147781|CTSB|1508|cathepsin B##NM_147782|CTSB|1508|cathepsin B##NM_147783|CTSB|1508|cathepsin B##AK075393|CTSB|1508|cathepsin B##AK092070|CTSB|1508|cathepsin B##AK130184|CTSB|1508|cathepsin B##AK290239|CTSB|1508|cathepsin B##AK297687|CTSB|1508|cathepsin B##BC095408|CTSB|1508|cathepsin B##AK296845|CTSB|1508|cathepsin B##BX647952|CTSB|1508|cathepsin B##AY621333|DEFB136|613210|defensin, beta 136##DQ012026|DEFB136|613210|defensin, beta 136##NM_001033018|DEFB136|613210|defensin, beta 136##AY621332|DEFB135|613209|defensin, beta 135##DQ012025|DEFB135|613209|defensin, beta 135##NM_001033017|DEFB135|613209|defensin, beta 135##AY621331|DEFB134|613211|defensin, beta 134##DQ012024|DEFB134|613211|defensin, beta 134##NM_001033019|DEFB134|613211|defensin, beta 134##BC130461|DEFB134|613211|defensin, beta 134##BC130463|DEFB134|613211|defensin, beta 134	0.991158	CTCF.p2:-16:0.991
chrX	154322874	154323018	reg1022589.p1	6.737	+	TSC_hg19_v1_chrX_+_154299784 AK310286 X64643 AK299194 AK313544 BC002999 BC006540 AB462964 AM392829 AY438030 CU678330 AK298886	-23156	+	TSC_hg19_v1_chrX_+_154299709 NM_001018055 NM_001242640 NM_024332	-23239	+	TSC_hg19_v1_chrX_-_154299405 BC002600 X64644 NM_001018024 NM_001018025	-23499	-	NM_003372 TSC_hg19_v1_chrX_+_154444736 BC009570 AK313420 BC046094 Y17394 BC040002 AB464347 BT019604 CU692296	121783	+	AL834460 TSC_hg19_v1_chrX_-_154493774 AY052478 NM_171998 BC009714	170858	-	AB463493 AM393055 AY191592 DQ892014 DQ895204 BC022305 BC005367 AK292785 Y12696 NM_001289	240914	-	AK310286|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##X64643|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK299194|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK313544|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC002999|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC006540|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AM392829|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AY438030|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK298886|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_001018055|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_001242640|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_024332|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##NM_001018025|MTCP1|4515|mature T-cell proliferation 1##NM_003372|VBP1|7411|von Hippel-Lindau binding protein 1##BC009570|VBP1|7411|von Hippel-Lindau binding protein 1##AK313420|VBP1|7411|von Hippel-Lindau binding protein 1##BC046094|VBP1|7411|von Hippel-Lindau binding protein 1##Y17394|VBP1|7411|von Hippel-Lindau binding protein 1##BC040002|VBP1|7411|von Hippel-Lindau binding protein 1##BT019604|VBP1|7411|von Hippel-Lindau binding protein 1##AL834460|RAB39B|116442|RAB39B, member RAS oncogene family##AY052478|RAB39B|116442|RAB39B, member RAS oncogene family##NM_171998|RAB39B|116442|RAB39B, member RAS oncogene family##BC009714|RAB39B|116442|RAB39B, member RAS oncogene family##AM393055|CLIC2|1193|chloride intracellular channel 2##AY191592|CLIC2|1193|chloride intracellular channel 2##DQ892014|CLIC2|1193|chloride intracellular channel 2##DQ895204|CLIC2|1193|chloride intracellular channel 2##BC022305|CLIC2|1193|chloride intracellular channel 2##BC005367|CLIC2|1193|chloride intracellular channel 2##AK292785|CLIC2|1193|chloride intracellular channel 2##Y12696|CLIC2|1193|chloride intracellular channel 2##NM_001289|CLIC2|1193|chloride intracellular channel 2	0.974846	CTCF.p2:0:0.975
chr14	101701697	101701841	reg1020704.p2	6.736	+	BC150617 NM_001134888	-350586	-	AK092707 TSC_hg19_v1_chr14_+_101300861	-400934	+	AF052114 TSC_hg19_v1_chr14_+_101295525	-406302	+	BX161470 NM_001362 S79854 TSC_hg19_v1_chr14_+_102027831 AK292310 BC017717	325994	+	NM_001161725 NM_001161726 TSC_hg19_v1_chr14_+_102228166 AL834350 BC051442 AK131391 AK302470	526417	+	TSC_hg19_v1_chr14_+_102276171 NM_002719 NM_178586 NM_178587 AK295449 AK315072 Z69030 U37352 BC016183	574414	+	BC150617|RTL1|388015|retrotransposon-like 1##NM_001134888|RTL1|388015|retrotransposon-like 1##AK092707|MEG3|55384|maternally expressed 3 (non-protein coding)##AF052114|MEG3|55384|maternally expressed 3 (non-protein coding)##BX161470|DIO3|1735|deiodinase, iodothyronine, type III##NM_001362|DIO3|1735|deiodinase, iodothyronine, type III##S79854|DIO3|1735|deiodinase, iodothyronine, type III##BC017717|DIO3|1735|deiodinase, iodothyronine, type III##NM_001161725|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_001161726|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AL834350|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC051442|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK131391|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK302470|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_002719|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178586|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178587|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK315072|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##Z69030|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##U37352|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC016183|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	0.994782	CTCF.p2:-15:0.995
chr1	49018243	49018340	reg1019464.p1	6.736	+	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	-80446	-	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	-80613	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	-329899	+	BC011804 AK021650 CU675869 NM_024603 BC007932	224206	-	TSC_hg19_v1_chr1_-_50489560 BC035739 AK094826 AK294394	1471256	-	TSC_hg19_v1_chr1_-_50489627 AK294633 AK296221 NM_032785	1471356	-	AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC011804|BEND5|79656|BEN domain containing 5##AK021650|BEND5|79656|BEN domain containing 5##NM_024603|BEND5|79656|BEN domain containing 5##BC007932|BEND5|79656|BEN domain containing 5##BC035739|AGBL4|84871|ATP/GTP binding protein-like 4##AK094826|AGBL4|84871|ATP/GTP binding protein-like 4##AK294394|AGBL4|84871|ATP/GTP binding protein-like 4##AK294633|AGBL4|84871|ATP/GTP binding protein-like 4##AK296221|AGBL4|84871|ATP/GTP binding protein-like 4##NM_032785|AGBL4|84871|ATP/GTP binding protein-like 4	0.921999	CTCF.p2:-6:0.922
chr2	118790093	118790207	reg1020403.p1	6.736	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-18417	-	TSC_hg19_v1_chr2_-_118771677 BC028609	-18466	-	AM393188 AM393503 AM393699 AB384355 AK057926 TSC_hg19_v1_chr2_-_118771647 BC093018 AK290722 AK309040 BC012052 AB209993	-18536	-	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	55913	+	NM_001426	815608	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	909670	+	NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC028609|CCDC93|54520|coiled-coil domain containing 93##AM393188|CCDC93|54520|coiled-coil domain containing 93##AM393503|CCDC93|54520|coiled-coil domain containing 93##AM393699|CCDC93|54520|coiled-coil domain containing 93##AK057926|CCDC93|54520|coiled-coil domain containing 93##BC093018|CCDC93|54520|coiled-coil domain containing 93##AK290722|CCDC93|54520|coiled-coil domain containing 93##AK309040|CCDC93|54520|coiled-coil domain containing 93##BC012052|CCDC93|54520|coiled-coil domain containing 93##AB209993|CCDC93|54520|coiled-coil domain containing 93##AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_001426|EN1|2019|engrailed homeobox 1##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure	0.993476	CTCF.p2:15:0.993
chr6	106783001	106783120	reg1020122.p1	6.736	+	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	-9397	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	-9528	-	BC002699 TSC_hg19_v1_chr6_-_106773313	-9752	-	AK056705 NM_001624	176669	+	TSC_hg19_v1_chr6_+_106960443 U83115	177351	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	294220	-	CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK056705|AIM1|202|absent in melanoma 1##NM_001624|AIM1|202|absent in melanoma 1##U83115|AIM1|202|absent in melanoma 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1	0.082184	
chr7	83143344	83143443	reg1021370.p1	6.736	+	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	-351157	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	-351524	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	-1070313	-	AK303925 NM_001178129	127353	-	NM_012431	135085	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	680929	-	NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	0.974074	CTCF.p2:6:0.974
chrX	133916963	133917093	reg1022901.p1	6.736	+	BC022335 AF234654 BC066327 AK075086 NM_021796	-124524	-	TSC_hg19_v1_chrX_+_133594303 BC000578 BT019350 CR407645 DQ895107 DQ895109 EU176316 EU176655 L29382 L29383	-322709	+	TSC_hg19_v1_chrX_+_133594225 M31642	-322772	+	AB541014 AB541015 AB528130 AM393279 CU676388 AK125991 TSC_hg19_v1_chrX_-_133930299 AK292517 AL832218 NM_001170756 NM_145284	13281	-	AK307219 NM_001170780	13414	+	TSC_hg19_v1_chrX_-_133931236 BC019221 NM_001166599 AK124650 AK297720 NM_001166600 NM_001170757	14175	-	BC022335|PLAC1|10761|placenta-specific 1##AF234654|PLAC1|10761|placenta-specific 1##BC066327|PLAC1|10761|placenta-specific 1##AK075086|PLAC1|10761|placenta-specific 1##NM_021796|PLAC1|10761|placenta-specific 1##BC000578|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##BT019350|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##CR407645|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895107|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895109|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176316|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176655|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29382|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29383|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##M31642|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##AB541015|FAM122B|159090|family with sequence similarity 122B##AM393279|FAM122B|159090|family with sequence similarity 122B##AK125991|FAM122B|159090|family with sequence similarity 122B##AK292517|FAM122B|159090|family with sequence similarity 122B##AL832218|FAM122B|159090|family with sequence similarity 122B##NM_001170756|FAM122B|159090|family with sequence similarity 122B##NM_145284|FAM122B|159090|family with sequence similarity 122B##AK307219|FAM122C|159091|family with sequence similarity 122C##NM_001170780|FAM122C|159091|family with sequence similarity 122C##BC019221|FAM122B|159090|family with sequence similarity 122B##NM_001166599|FAM122B|159090|family with sequence similarity 122B##AK124650|FAM122B|159090|family with sequence similarity 122B##AK297720|FAM122B|159090|family with sequence similarity 122B##NM_001166600|FAM122B|159090|family with sequence similarity 122B##NM_001170757|FAM122B|159090|family with sequence similarity 122B	0.883393	CTCF.p2:1:0.883
chr12	117674406	117674527	reg1019556.p2	6.735	+	AL136899 TSC_hg19_v1_chr12_-_117628277 BC091496 AF174601 AB020682 AK001699 AK314573 BC034045 BC042333 AK308141 NM_015002 NM_033624	-46241	-	DQ894644 TSC_hg19_v1_chr12_-_117537222 AF443207 BC015221 NM_001168325 NM_017899 AK000614	-137203	-	TSC_hg19_v1_chr12_+_117348781 BC037296 NM_012174 NM_153348 AK289621 AF176707 BC075823	-325680	+	NM_001204213	68390	-	NM_001204214	72748	-	AF446136 TSC_hg19_v1_chr12_-_117799037	124555	-	AL136899|FBXO21|23014|F-box protein 21##BC091496|FBXO21|23014|F-box protein 21##AF174601|FBXO21|23014|F-box protein 21##AB020682|FBXO21|23014|F-box protein 21##AK001699|FBXO21|23014|F-box protein 21##AK314573|FBXO21|23014|F-box protein 21##BC034045|FBXO21|23014|F-box protein 21##BC042333|FBXO21|23014|F-box protein 21##AK308141|FBXO21|23014|F-box protein 21##NM_015002|FBXO21|23014|F-box protein 21##NM_033624|FBXO21|23014|F-box protein 21##DQ894644|TESC|54997|tescalcin##AF443207|TESC|54997|tescalcin##BC015221|TESC|54997|tescalcin##NM_001168325|TESC|54997|tescalcin##NM_017899|TESC|54997|tescalcin##AK000614|TESC|54997|tescalcin##BC037296|FBXW8|26259|F-box and WD repeat domain containing 8##NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8##NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8##AK289621|FBXW8|26259|F-box and WD repeat domain containing 8##AF176707|FBXW8|26259|F-box and WD repeat domain containing 8##NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446136|NOS1|4842|nitric oxide synthase 1 (neuronal)	0.999545	CTCF.p2:2:1.000
chrX	47504248	47504346	reg1021297.p3	6.735	+	NM_002621	-14594	-	AB590250 CU677429 DQ893460 DQ896310 TSC_hg19_v1_chrX_-_47489295 AK122955 BC015756 X57748 M83652 AK310695 NM_001145252	-14992	-	TSC_hg19_v1_chrX_-_47479257 BC048799 NM_006950 NM_133499	-25027	-	BC048296 AB016193 TSC_hg19_v1_chrX_-_47509984 AK312984 AF000672 M25269	5630	-	TSC_hg19_v1_chrX_-_47510001 NM_001114123 NM_005229	5711	-	TSC_hg19_v1_chrX_-_47518534 AF083242 AK223320	14214	-	NM_002621|CFP|5199|complement factor properdin##DQ893460|CFP|5199|complement factor properdin##DQ896310|CFP|5199|complement factor properdin##AK122955|CFP|5199|complement factor properdin##BC015756|CFP|5199|complement factor properdin##X57748|CFP|5199|complement factor properdin##M83652|CFP|5199|complement factor properdin##AK310695|CFP|5199|complement factor properdin##NM_001145252|CFP|5199|complement factor properdin##BC048799|SYN1|6853|synapsin I##NM_006950|SYN1|6853|synapsin I##NM_133499|SYN1|6853|synapsin I##BC048296|ELK1|2002|ELK1, member of ETS oncogene family##AB016193|ELK1|2002|ELK1, member of ETS oncogene family##AK312984|ELK1|2002|ELK1, member of ETS oncogene family##AF000672|ELK1|2002|ELK1, member of ETS oncogene family##M25269|ELK1|2002|ELK1, member of ETS oncogene family##NM_001114123|ELK1|2002|ELK1, member of ETS oncogene family##NM_005229|ELK1|2002|ELK1, member of ETS oncogene family##AF083242|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AK223320|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone	0.261838	CTCF.p2:-47:0.249
chrX	51163628	51163743	reg1022819.p1	6.735	+	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	-87982	+	AF469196 NM_153183	-88603	+	BC117264 BC117266 NM_005448 BC069155 HQ258214	-509927	+	AB528198 AM392606 AK001490 TSC_hg19_v1_chrX_-_51239368	75647	-	BC009942 TSC_hg19_v1_chrX_-_51239444 NM_018159	75757	-	TSC_hg19_v1_chrX_+_51486493 NM_018094 AK225671 BC036077 AK298868 AK023155 AK001303	322826	+	AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AM392606|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK001490|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##BC009942|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018159|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018094|GSPT2|23708|G1 to S phase transition 2##BC036077|GSPT2|23708|G1 to S phase transition 2##AK298868|GSPT2|23708|G1 to S phase transition 2##AK023155|GSPT2|23708|G1 to S phase transition 2##AK001303|GSPT2|23708|G1 to S phase transition 2	0.999082	CTCF.p2:6:0.999
chr10	71167639	71167773	reg1018862.p1	6.734	+	TSC_hg19_v1_chr10_+_71078629 BC008730 DQ893281 DQ896762 CU679065 AB384968	-89041	+	AK309904 TSC_hg19_v1_chr10_+_71078627	-89079	+	TSC_hg19_v1_chr10_+_71078602 AK292012 NM_000188 AK294428 AB209526 M75126	-89107	+	AK300649 BC033742 AK291996 NM_001057	8914	-	TSC_hg19_v1_chr10_+_71211220 NM_012339 BC003157 BC004161 AF120266	43555	+	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	43627	+	BC008730|HK1|3098|hexokinase 1##DQ893281|HK1|3098|hexokinase 1##DQ896762|HK1|3098|hexokinase 1##AK309904|HK1|3098|hexokinase 1##AK292012|HK1|3098|hexokinase 1##NM_000188|HK1|3098|hexokinase 1##AK294428|HK1|3098|hexokinase 1##AB209526|HK1|3098|hexokinase 1##M75126|HK1|3098|hexokinase 1##AK300649|TACR2|6865|tachykinin receptor 2##BC033742|TACR2|6865|tachykinin receptor 2##AK291996|TACR2|6865|tachykinin receptor 2##NM_001057|TACR2|6865|tachykinin receptor 2##NM_012339|TSPAN15|23555|tetraspanin 15##BC003157|TSPAN15|23555|tetraspanin 15##BC004161|TSPAN15|23555|tetraspanin 15##AF120266|TSPAN15|23555|tetraspanin 15	0.874159	CTCF.p2:-3:0.874
chr17	67243049	67243179	reg1019843.p1	6.734	+	AY028900 NM_080282 AY247065	-2144	-	BC125231 BC125232 AY028898 NM_080284 TSC_hg19_v1_chr17_-_67138037 BC070125 AK308431 BC029852	-105039	-	BC062472 AK057068 AY028899 NM_080283	-186024	-	AK096664 NM_018672	68659	-	TSC_hg19_v1_chr17_-_67323275 BC029426 AJ512612 AJ275973 AK292592 NM_172232	80175	-	AK290747 NM_002758 U39065 AK225719 X96757 BC012009	167762	+	AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK096664|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_018672|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##BC029426|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ512612|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ275973|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AK292592|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_172232|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6##NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6##U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6##X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6	0.998562	CTCF.p2:8:0.999
chr2	60563690	60563791	reg1021244.p1	6.734	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2095258	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-2289752	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-2289986	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	216782	-	AF080216 TSC_hg19_v1_chr2_-_60780784	217038	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	419744	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.0	
chr2	73115061	73115190	reg1022173.p1	6.734	+	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	-595	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	-62021	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	-740183	-	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	29528	+	TSC_hg19_v1_chr2_-_73298414 AK024193	183311	-	TSC_hg19_v1_chr2_-_73298842 AL833454 AK314770 AK289731 AY044437 BC101311 BC101312 BC101313 NM_144579	183764	-	NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1##AK024193|SFXN5|94097|sideroflexin 5##AL833454|SFXN5|94097|sideroflexin 5##AK314770|SFXN5|94097|sideroflexin 5##AK289731|SFXN5|94097|sideroflexin 5##AY044437|SFXN5|94097|sideroflexin 5##BC101311|SFXN5|94097|sideroflexin 5##BC101312|SFXN5|94097|sideroflexin 5##BC101313|SFXN5|94097|sideroflexin 5##NM_144579|SFXN5|94097|sideroflexin 5	0.950051	CTCF.p2:9:0.950
chr12	32810608	32810772	reg1022070.p2	6.733	+	TSC_hg19_v1_chr12_+_32687260 AK303334	-123427	+	BC039708 BC063403 NM_139241 BC096746 AK057294 BC045552	-155651	+	AK313430 AK290188 NM_001003398 NM_001714 U90028 BC136372 TSC_hg19_v1_chr12_+_32260263	-550517	+	TSC_hg19_v1_chr12_+_32832187 AK302565 NM_005690 NM_012062 NM_012063 AK311606	21467	+	TSC_hg19_v1_chr12_+_32832234 AK299926 AF000430 AK291094 AK293290 AK294533 AK298568 BC107763 AB209070 AB006965 BC024590	21547	+	TSC_hg19_v1_chr12_+_32832277 AF061795 AF151685 AB384831 CU692924 DQ891544 DQ894732 BC000136	21633	+	AK303334|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)##U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK302565|DNM1L|10059|dynamin 1-like##NM_005690|DNM1L|10059|dynamin 1-like##NM_012062|DNM1L|10059|dynamin 1-like##NM_012063|DNM1L|10059|dynamin 1-like##AK311606|DNM1L|10059|dynamin 1-like##AK299926|DNM1L|10059|dynamin 1-like##AF000430|DNM1L|10059|dynamin 1-like##AK291094|DNM1L|10059|dynamin 1-like##AK293290|DNM1L|10059|dynamin 1-like##AK294533|DNM1L|10059|dynamin 1-like##AK298568|DNM1L|10059|dynamin 1-like##BC107763|DNM1L|10059|dynamin 1-like##AB209070|DNM1L|10059|dynamin 1-like##AB006965|DNM1L|10059|dynamin 1-like##BC024590|DNM1L|10059|dynamin 1-like##AF061795|DNM1L|10059|dynamin 1-like##AF151685|DNM1L|10059|dynamin 1-like##DQ891544|DNM1L|10059|dynamin 1-like##DQ894732|DNM1L|10059|dynamin 1-like	0.0	
chr17	58798223	58798380	reg1021811.p1	6.733	+	TSC_hg19_v1_chr17_+_58755255 NM_001099432 NM_017679 AK304791 AK225757 BC017390 AK314744 AF361219 BC117275 BC143386 BC143387 AK025510	-43088	+	TSC_hg19_v1_chr17_+_58677710 BC016480 BC042418 BC032826 BC033893 DQ891047 EU176552 BT009780	-120612	+	TSC_hg19_v1_chr17_+_58677553 BC060877 NM_003620 AK312902 AK299773 U78305	-120757	+	TSC_hg19_v1_chr17_+_59477203 BC052566 NM_005994 AK127429 BC070054	678935	+	TSC_hg19_v1_chr17_+_59477477 U28049	679195	+	TSC_hg19_v1_chr17_+_59477713 AL832900 AB209378	679416	+	NM_001099432|BCAS3|54828|breast carcinoma amplified sequence 3##NM_017679|BCAS3|54828|breast carcinoma amplified sequence 3##AK304791|BCAS3|54828|breast carcinoma amplified sequence 3##AK225757|BCAS3|54828|breast carcinoma amplified sequence 3##BC017390|BCAS3|54828|breast carcinoma amplified sequence 3##AK314744|BCAS3|54828|breast carcinoma amplified sequence 3##AF361219|BCAS3|54828|breast carcinoma amplified sequence 3##BC117275|BCAS3|54828|breast carcinoma amplified sequence 3##BC143386|BCAS3|54828|breast carcinoma amplified sequence 3##BC143387|BCAS3|54828|breast carcinoma amplified sequence 3##AK025510|BCAS3|54828|breast carcinoma amplified sequence 3##BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC052566|TBX2|6909|T-box 2##NM_005994|TBX2|6909|T-box 2##BC070054|TBX2|6909|T-box 2##U28049|TBX2|6909|T-box 2##AL832900|TBX2|6909|T-box 2##AB209378|TBX2|6909|T-box 2	0.603919	CTCF.p2:1:0.604
chr2	219552281	219552397	reg1018211.p1	6.733	+	TSC_hg19_v1_chr2_+_219536837 NM_001243313 NM_015690 AB033104 BC026158	-15548	+	AB527514 CU677361 TSC_hg19_v1_chr2_-_219536703 BC015612 AK023968 BC028167 AK222525 AK289501 NM_022453	-15603	-	TSC_hg19_v1_chr2_+_219524452 BC000416 BC007500 AF026849 AK096210	-27864	+	TSC_hg19_v1_chr2_+_219575602 AK302728 NM_014640 AK291770 BC021707 AL833511	23254	+	TSC_hg19_v1_chr2_+_219575684 D79995	23368	+	TSC_hg19_v1_chr2_+_219646471 AK226039 NM_000784 BC017044	94135	+	NM_001243313|STK36|27148|serine/threonine kinase 36##NM_015690|STK36|27148|serine/threonine kinase 36##AB033104|STK36|27148|serine/threonine kinase 36##BC026158|STK36|27148|serine/threonine kinase 36##BC015612|RNF25|64320|ring finger protein 25##AK023968|RNF25|64320|ring finger protein 25##BC028167|RNF25|64320|ring finger protein 25##AK222525|RNF25|64320|ring finger protein 25##AK289501|RNF25|64320|ring finger protein 25##NM_022453|RNF25|64320|ring finger protein 25##BC000416|BCS1L|617|BCS1-like (S. cerevisiae)##BC007500|BCS1L|617|BCS1-like (S. cerevisiae)##AF026849|BCS1L|617|BCS1-like (S. cerevisiae)##AK096210|BCS1L|617|BCS1-like (S. cerevisiae)##AK302728|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##NM_014640|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##AK291770|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##BC021707|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##AL833511|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##D79995|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	0.099511	
chr2	49998159	49998289	reg1021396.p1	6.733	+	AY429104 BC096831 X68044 JN003607 BC118548 BC125270 M65085 S59900 M95489 AK292562 AK310367 NM_000145 NM_181446	-616614	-	S57793 M63108 M73746 AK123498 NM_000233	-1015380	-	AK302220 NM_001193487 NM_006872 BC025991 AK223350 AF106857 CU693090 DQ891566 DQ894756 BC064585	-1153249	+	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	576698	-	TSC_hg19_v1_chr2_-_51259258 BC046631	1261034	-	EF539882 AK124726 NM_001135659 NM_004801	1261380	-	AY429104|FSHR|2492|follicle stimulating hormone receptor##BC096831|FSHR|2492|follicle stimulating hormone receptor##X68044|FSHR|2492|follicle stimulating hormone receptor##JN003607|FSHR|2492|follicle stimulating hormone receptor##BC118548|FSHR|2492|follicle stimulating hormone receptor##BC125270|FSHR|2492|follicle stimulating hormone receptor##M65085|FSHR|2492|follicle stimulating hormone receptor##S59900|FSHR|2492|follicle stimulating hormone receptor##M95489|FSHR|2492|follicle stimulating hormone receptor##AK292562|FSHR|2492|follicle stimulating hormone receptor##AK310367|FSHR|2492|follicle stimulating hormone receptor##NM_000145|FSHR|2492|follicle stimulating hormone receptor##NM_181446|FSHR|2492|follicle stimulating hormone receptor##S57793|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M63108|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M73746|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK123498|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##NM_000233|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like##BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like##AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like##AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like##BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like##AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##BC046631|NRXN1|9378|neurexin 1##EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1	0.0	
chr10	14931445	14931570	reg1021731.p1	6.732	+	NM_001193424 NM_001193426 BC029360 TSC_hg19_v1_chr10_+_14920864 NM_001193425 NM_001193427 AK222565 AK225369 AK027067 CU688630 BC007754 NM_024670	-10668	+	TSC_hg19_v1_chr10_+_14880343 AF143723 AK292323 AB528152 AB587406	-51136	+	TSC_hg19_v1_chr10_+_14880335 AF112210 BC119690 BC119691	-51169	+	CU692508 TSC_hg19_v1_chr10_-_14996096 BC108276 AK022922 BC022254 AF395747 AF395748 AF395749 AF395750 AF395751 AF395752 AJ296101 BC009185 BX648858 AK021422 AK290598 AK307912 NM_001033855 NM_001033857 NM_001033858 NM_022487	64547	-	NM_001080836	69930	+	NM_001039702 NM_018324 BC050372 AK001844 AK001968	154420	+	NM_001193424|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193426|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##BC029360|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193425|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193427|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK222565|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK225369|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK027067|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##BC007754|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_024670|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AF143723|HSPA14|51182|heat shock 70kDa protein 14##AK292323|HSPA14|51182|heat shock 70kDa protein 14##AF112210|HSPA14|51182|heat shock 70kDa protein 14##BC119690|HSPA14|51182|heat shock 70kDa protein 14##BC119691|HSPA14|51182|heat shock 70kDa protein 14##BC108276|DCLRE1C|64421|DNA cross-link repair 1C##AK022922|DCLRE1C|64421|DNA cross-link repair 1C##BC022254|DCLRE1C|64421|DNA cross-link repair 1C##AF395747|DCLRE1C|64421|DNA cross-link repair 1C##AF395748|DCLRE1C|64421|DNA cross-link repair 1C##AF395749|DCLRE1C|64421|DNA cross-link repair 1C##AF395750|DCLRE1C|64421|DNA cross-link repair 1C##AF395751|DCLRE1C|64421|DNA cross-link repair 1C##AF395752|DCLRE1C|64421|DNA cross-link repair 1C##AJ296101|DCLRE1C|64421|DNA cross-link repair 1C##BC009185|DCLRE1C|64421|DNA cross-link repair 1C##BX648858|DCLRE1C|64421|DNA cross-link repair 1C##AK021422|DCLRE1C|64421|DNA cross-link repair 1C##AK290598|DCLRE1C|64421|DNA cross-link repair 1C##AK307912|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033855|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033857|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033858|DCLRE1C|64421|DNA cross-link repair 1C##NM_022487|DCLRE1C|64421|DNA cross-link repair 1C##NM_001080836|MEIG1|644890|meiosis expressed gene 1 homolog (mouse)##NM_001039702|OLAH|55301|oleoyl-ACP hydrolase##NM_018324|OLAH|55301|oleoyl-ACP hydrolase##BC050372|OLAH|55301|oleoyl-ACP hydrolase##AK001844|OLAH|55301|oleoyl-ACP hydrolase##AK001968|OLAH|55301|oleoyl-ACP hydrolase	0.862949	CTCF.p2:-14:0.863
chr20	45191248	45191358	reg1019343.p2	6.732	+	NM_080721 TSC_hg19_v1_chr20_-_45179294	-12050	-	AK001331 AK095611 BC024177 NM_018102 NM_199441 BC026321 TSC_hg19_v1_chr20_-_45142199	-49108	-	AL831934 TSC_hg19_v1_chr20_-_45087948	-103372	-	DQ892655 DQ895894 AF154121 AY072810 AK293902 AK056713 AK295748 AK315131 BC035966 NM_001193339 NM_001193342 NM_022829 TSC_hg19_v1_chr20_-_45280099	88778	-	TSC_hg19_v1_chr20_-_45313125 AK096658 NM_001011554 NM_001193340	121821	-	TSC_hg19_v1_chr20_-_45318084 BC010637 BC035461 AB587589 AK096502 BC066309 BC019621 AK315182	126664	-	NM_080721|C20orf123|128506|chromosome 20 open reading frame 123##AK001331|ZNF334|55713|zinc finger protein 334##AK095611|ZNF334|55713|zinc finger protein 334##BC024177|ZNF334|55713|zinc finger protein 334##NM_018102|ZNF334|55713|zinc finger protein 334##NM_199441|ZNF334|55713|zinc finger protein 334##BC026321|ZNF334|55713|zinc finger protein 334##AL831934|ZNF663|100130934|zinc finger protein 663##DQ892655|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##DQ895894|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AF154121|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AY072810|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK293902|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK056713|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK295748|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK315131|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##BC035966|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193339|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193342|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_022829|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK096658|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001011554|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193340|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##BC010637|TP53RK|112858|TP53 regulating kinase##BC035461|TP53RK|112858|TP53 regulating kinase##AK096502|TP53RK|112858|TP53 regulating kinase##BC066309|TP53RK|112858|TP53 regulating kinase##BC019621|TP53RK|112858|TP53 regulating kinase##AK315182|TP53RK|112858|TP53 regulating kinase	0.0	
chr2	28030499	28030613	reg1020437.p1	6.731	+	TSC_hg19_v1_chr2_+_27994614 BC020834 AF047440 BC087846 BC009475 CR456888 CR542117	-35894	+	TSC_hg19_v1_chr2_+_27994585 BC090047 NM_004891 NM_145330	-35973	+	TSC_hg19_v1_chr2_+_27886755 AK300958	-143786	+	CU675980 AK300989 TSC_hg19_v1_chr2_-_28113253 AJ404857 NM_022128 BX648909 AY643715 BC017425	82694	-	NM_199193 NM_199194 NM_004899 NM_199191 NM_199192 TSC_hg19_v1_chr2_+_28113595 AK000097	82982	+	TSC_hg19_v1_chr2_+_28113605 AK291086	83045	+	BC020834|MRPL33|9553|mitochondrial ribosomal protein L33##AF047440|MRPL33|9553|mitochondrial ribosomal protein L33##BC087846|MRPL33|9553|mitochondrial ribosomal protein L33##BC009475|MRPL33|9553|mitochondrial ribosomal protein L33##CR456888|MRPL33|9553|mitochondrial ribosomal protein L33##CR542117|MRPL33|9553|mitochondrial ribosomal protein L33##BC090047|MRPL33|9553|mitochondrial ribosomal protein L33##NM_004891|MRPL33|9553|mitochondrial ribosomal protein L33##NM_145330|MRPL33|9553|mitochondrial ribosomal protein L33##AK300958|SLC4A1AP|22950|solute carrier family 4 (anion exchanger), member 1, adaptor protein##AK300989|RBKS|64080|ribokinase##AJ404857|RBKS|64080|ribokinase##NM_022128|RBKS|64080|ribokinase##BX648909|RBKS|64080|ribokinase##AY643715|RBKS|64080|ribokinase##BC017425|RBKS|64080|ribokinase##NM_199193|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##NM_199194|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##NM_004899|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##NM_199191|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##NM_199192|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AK000097|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AK291086|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)	0.0	
chr8	106794116	106794225	reg1020006.p1	6.731	+	AF119334 BC109222 BC109223 NM_012082	-463024	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-1192923	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-1192995	-	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	488253	+	AK296561 NM_001198532	665981	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	875818	+	AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1	0.998194	CTCF.p2:0:0.998
chr11	68811785	68811914	reg1019565.p1	6.730	+	BC016964 AK098317 TSC_hg19_v1_chr11_-_68780715 AK293469 AK075492 AK122669 AK131068 AK075450 NM_001098515 NM_145015	-31091	-	AB154410 AB463856 AY427820 NM_198923	-63395	-	TSC_hg19_v1_chr11_+_68671384 AB208802 BC105088 BC105090 BC015666 BC062312 BC000290	-140447	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	4501	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	4577	+	BC064339 TSC_hg19_v1_chr11_+_68857563	45677	+	BC016964|MRGPRF|116535|MAS-related GPR, member F##AK098317|MRGPRF|116535|MAS-related GPR, member F##AK293469|MRGPRF|116535|MAS-related GPR, member F##AK075492|MRGPRF|116535|MAS-related GPR, member F##AK122669|MRGPRF|116535|MAS-related GPR, member F##AK131068|MRGPRF|116535|MAS-related GPR, member F##AK075450|MRGPRF|116535|MAS-related GPR, member F##NM_001098515|MRGPRF|116535|MAS-related GPR, member F##NM_145015|MRGPRF|116535|MAS-related GPR, member F##AB154410|MRGPRD|116512|MAS-related GPR, member D##AY427820|MRGPRD|116512|MAS-related GPR, member D##NM_198923|MRGPRD|116512|MAS-related GPR, member D##AB208802|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC105088|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC105090|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC015666|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC062312|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC000290|IGHMBP2|3508|immunoglobulin mu binding protein 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2	0.890913	CTCF.p2:18:0.802
chr12	96214026	96214148	reg1018303.p2	6.730	+	BC136798 BC136799 AF278532 NM_021229 AF119916 TSC_hg19_v1_chr12_-_96184542	-29561	-	TSC_hg19_v1_chr12_-_96184346 AF297711 AK226070 AK315796	-29718	-	AL136825 NM_032147	-268843	-	TSC_hg19_v1_chr12_+_96252729 NM_003095 BC002505 X85372 AK311752 BC063397	38646	+	TSC_hg19_v1_chr12_+_96252771 BC128452 BC128453	38700	+	BC030712 BC095479 BC047659 AK097408 NM_182496	122313	-	BC136798|NTN4|59277|netrin 4##BC136799|NTN4|59277|netrin 4##AF278532|NTN4|59277|netrin 4##NM_021229|NTN4|59277|netrin 4##AF119916|NTN4|59277|netrin 4##AF297711|NTN4|59277|netrin 4##AK226070|NTN4|59277|netrin 4##AK315796|NTN4|59277|netrin 4##AL136825|USP44|84101|ubiquitin specific peptidase 44##NM_032147|USP44|84101|ubiquitin specific peptidase 44##NM_003095|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC002505|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##X85372|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##AK311752|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC063397|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC128452|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC128453|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC095479|CCDC38|120935|coiled-coil domain containing 38##BC047659|CCDC38|120935|coiled-coil domain containing 38##AK097408|CCDC38|120935|coiled-coil domain containing 38##NM_182496|CCDC38|120935|coiled-coil domain containing 38	0.993757	CTCF.p2:-7:0.994
chr1	102900165	102900292	reg1021928.p2	6.729	+	NM_058170 TSC_hg19_v1_chr1_-_102462791	-437438	-	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	-437741	-	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-1197658	+	AB208844 TSC_hg19_v1_chr1_-_103496798	596555	-	J04177 TSC_hg19_v1_chr1_-_103574032 BC117697	673743	-	NM_001190709 NM_001854 NM_080629 NM_080630 TSC_hg19_v1_chr1_-_103574051	673823	-	NM_058170|OLFM3|118427|olfactomedin 3##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##AB208844|COL11A1|1301|collagen, type XI, alpha 1##J04177|COL11A1|1301|collagen, type XI, alpha 1##BC117697|COL11A1|1301|collagen, type XI, alpha 1##NM_001190709|COL11A1|1301|collagen, type XI, alpha 1##NM_001854|COL11A1|1301|collagen, type XI, alpha 1##NM_080629|COL11A1|1301|collagen, type XI, alpha 1##NM_080630|COL11A1|1301|collagen, type XI, alpha 1	0.939688	CTCF.p2:9:0.940
chr15	41873393	41873494	reg1020871.p1	6.729	+	TSC_hg19_v1_chr15_+_41851415 NM_006293 D17517 BC051756 BC034960 BC049368 U05682 AB384948 CU690612 D50479	-22108	+	TSC_hg19_v1_chr15_-_41836465 AK022794 NM_015540 AK308884	-36979	-	AB037824 TSC_hg19_v1_chr15_-_41836456 AK290224 BC000246	-36994	-	TSC_hg19_v1_chr15_+_41952628 NM_001080541 NM_001164273	79162	+	TSC_hg19_v1_chr15_+_41952661 AK055203	79209	+	AB011090 TSC_hg19_v1_chr15_+_42052630	179160	+	NM_006293|TYRO3|7301|TYRO3 protein tyrosine kinase##D17517|TYRO3|7301|TYRO3 protein tyrosine kinase##BC051756|TYRO3|7301|TYRO3 protein tyrosine kinase##BC034960|TYRO3|7301|TYRO3 protein tyrosine kinase##BC049368|TYRO3|7301|TYRO3 protein tyrosine kinase##U05682|TYRO3|7301|TYRO3 protein tyrosine kinase##D50479|TYRO3|7301|TYRO3 protein tyrosine kinase##AK022794|RPAP1|26015|RNA polymerase II associated protein 1##NM_015540|RPAP1|26015|RNA polymerase II associated protein 1##AK308884|RPAP1|26015|RNA polymerase II associated protein 1##AB037824|RPAP1|26015|RNA polymerase II associated protein 1##AK290224|RPAP1|26015|RNA polymerase II associated protein 1##BC000246|RPAP1|26015|RNA polymerase II associated protein 1##NM_001080541|MGA|23269|MAX gene associated##NM_001164273|MGA|23269|MAX gene associated##AK055203|MGA|23269|MAX gene associated##AB011090|MGA|23269|MAX gene associated	0.0	
chr18	67839584	67839734	reg1022199.p1	6.729	+	GU935335 GU935336 U56102 NM_006566	-215464	-	AK313199 TSC_hg19_v1_chr18_-_67615110	-224560	-	TSC_hg19_v1_chr18_+_67068214 NM_152721 AY599248 BC096744	-771429	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	33279	-	NM_004232 TSC_hg19_v1_chr18_+_67956194	116508	+	TSC_hg19_v1_chr18_+_67956280 BC020082	116602	+	GU935335|CD226|10666|CD226 molecule##GU935336|CD226|10666|CD226 molecule##U56102|CD226|10666|CD226 molecule##NM_006566|CD226|10666|CD226 molecule##AK313199|CD226|10666|CD226 molecule##NM_152721|DOK6|220164|docking protein 6##AY599248|DOK6|220164|docking protein 6##BC096744|DOK6|220164|docking protein 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC020082|SOCS6|9306|suppressor of cytokine signaling 6	0.0	
chr8	30027880	30027989	reg1018994.p1	6.729	+	D84145 NM_006571 TSC_hg19_v1_chr8_+_30013882 AK314128 BC013175 CR456851	-14079	+	NM_001100916 EU518495	-25734	-	TSC_hg19_v1_chr8_+_29952989 AK075363 AF161461 DQ891897 DQ895083 CR541735 CR541760	-74935	+	Z36874 TSC_hg19_v1_chr8_+_30209759	181803	+	NM_001008710 NM_001008711 NM_001008712 NM_006867 AK304858 D84107 D84108 D84109 D84110 TSC_hg19_v1_chr8_+_30242056 BC003608	214075	+	NM_001206847	468182	+	D84145|DCTN6|10671|dynactin 6##NM_006571|DCTN6|10671|dynactin 6##AK314128|DCTN6|10671|dynactin 6##BC013175|DCTN6|10671|dynactin 6##CR456851|DCTN6|10671|dynactin 6##NM_001100916|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##EU518495|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing##NM_006867|RBPMS|11030|RNA binding protein with multiple splicing##AK304858|RBPMS|11030|RNA binding protein with multiple splicing##D84107|RBPMS|11030|RNA binding protein with multiple splicing##D84108|RBPMS|11030|RNA binding protein with multiple splicing##D84109|RBPMS|11030|RNA binding protein with multiple splicing##D84110|RBPMS|11030|RNA binding protein with multiple splicing##BC003608|RBPMS|11030|RNA binding protein with multiple splicing##NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341	0.992732	CTCF.p2:-7:0.993
chr10	92639985	92640091	reg1018753.p2	6.728	+	TSC_hg19_v1_chr10_+_92631730 NM_001104546 NM_006413 AL833628 AK296196 U77665 AK312900 AK225532 DQ893181 DQ896488	-8316	+	TSC_hg19_v1_chr10_+_92631241 BC006991	-8781	+	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	-22305	-	AB528537 DQ892852 DQ896099 AY903446 BC005191 AK290960 BC018667 TSC_hg19_v1_chr10_-_92680845	40778	-	X83703 NM_014391	40990	-	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	282724	+	NM_001104546|RPP30|10556|ribonuclease P/MRP 30kDa subunit##NM_006413|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AL833628|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK296196|RPP30|10556|ribonuclease P/MRP 30kDa subunit##U77665|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK312900|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK225532|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ893181|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ896488|RPP30|10556|ribonuclease P/MRP 30kDa subunit##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5	0.958114	CTCF.p2:-2:0.958
chr12	15733583	15733716	reg1021779.p2	6.728	+	TSC_hg19_v1_chr12_+_15699551 AK290982	-34072	+	NM_030668 NM_030669 NM_030670 NM_030671 AF152378 AF187042 AF187043 AF187044	-34368	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	-258098	+	TSC_hg19_v1_chr12_-_15815073 AK316134	81491	-	TSC_hg19_v1_chr12_-_15865848 AK292931	132215	-	TSC_hg19_v1_chr12_-_15942323 U12535 BC005836 AK291777 BC030010	208583	-	AK290982|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK316134|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK292931|EPS8|2059|epidermal growth factor receptor pathway substrate 8##U12535|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC005836|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK291777|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC030010|EPS8|2059|epidermal growth factor receptor pathway substrate 8	0.131075	
chr5	68338759	68338927	reg1020680.p1	6.728	+	AK094785 NM_001242466 AK294919	-750391	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-752297	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-754549	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	50960	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	51039	+	AK292925 TSC_hg19_v1_chr5_+_68389913	51070	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.931966	CTCF.p2:-9:0.932
chr10	101307862	101307964	reg1020137.p1	6.727	+	NM_145285 BC025788 AK313485 AK300856	-15200	+	AK301916 AB587385 AY513279 M37400 AF052153 BC000498 AK312684 TSC_hg19_v1_chr10_-_101190382 AK293483 AK309174 NM_002079	-117547	-	TSC_hg19_v1_chr10_+_101089114 AK308618	-218787	+	TSC_hg19_v1_chr10_-_101380086 AF327403 AJ303078 AF327402 AJ303077 BC058937	72194	-	BC076399 TSC_hg19_v1_chr10_-_101380197 BC047312	72267	-	TSC_hg19_v1_chr10_-_101380229 NM_031212	72310	-	NM_145285|NKX2-3|159296|NK2 homeobox 3##BC025788|NKX2-3|159296|NK2 homeobox 3##AK313485|NKX2-3|159296|NK2 homeobox 3##AK300856|NKX2-3|159296|NK2 homeobox 3##AK301916|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AY513279|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##M37400|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AF052153|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##BC000498|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK312684|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK293483|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK309174|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##NM_002079|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK308618|CNNM1|26507|cyclin M1##AF327403|SLC25A28|81894|solute carrier family 25, member 28##AJ303078|SLC25A28|81894|solute carrier family 25, member 28##AF327402|SLC25A28|81894|solute carrier family 25, member 28##AJ303077|SLC25A28|81894|solute carrier family 25, member 28##BC058937|SLC25A28|81894|solute carrier family 25, member 28##BC076399|SLC25A28|81894|solute carrier family 25, member 28##BC047312|SLC25A28|81894|solute carrier family 25, member 28##NM_031212|SLC25A28|81894|solute carrier family 25, member 28	0.942269	CTCF.p2:1:0.942
chr1	205638192	205638373	reg1021489.p1	6.727	+	NM_001973 NM_021795	-36283	-	BC063676 M85164 M85165 TSC_hg19_v1_chr1_-_205601025 BC040145	-37376	-	BC036549 AK091896 AX747240 TSC_hg19_v1_chr1_+_205538184 AK304120 AK090831 AX746641 AK295148	-100069	+	BC050416 AY033593 TSC_hg19_v1_chr1_-_205649588	11286	-	AK313479 TSC_hg19_v1_chr1_-_205649636 AK290364 FJ805258 FJ805259 FJ805260 FJ805261 NM_033102 EF632109	11399	-	TSC_hg19_v1_chr1_-_205719084 CR457339 AB528490 DQ891218 DQ894401	80807	-	NM_001973|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##NM_021795|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC063676|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85164|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85165|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC040145|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC036549|MFSD4|148808|major facilitator superfamily domain containing 4##AK091896|MFSD4|148808|major facilitator superfamily domain containing 4##AK304120|MFSD4|148808|major facilitator superfamily domain containing 4##AK090831|MFSD4|148808|major facilitator superfamily domain containing 4##AK295148|MFSD4|148808|major facilitator superfamily domain containing 4##BC050416|SLC45A3|85414|solute carrier family 45, member 3##AY033593|SLC45A3|85414|solute carrier family 45, member 3##AK313479|SLC45A3|85414|solute carrier family 45, member 3##AK290364|SLC45A3|85414|solute carrier family 45, member 3##NM_033102|SLC45A3|85414|solute carrier family 45, member 3##CR457339|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1##DQ891218|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1##DQ894401|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	0.089997	
chr12	13892665	13892796	reg1020965.p2	6.727	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-543001	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-543013	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-543092	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	240256	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	625905	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	645542	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.732836	CTCF.p2:-3:0.733
chr14	35684418	35684535	reg1020395.p1	6.726	+	TSC_hg19_v1_chr14_+_35591757 AK301931 BC050339 BC044580 BC001542 AK304066 BC032221 NM_014672 AB002389 BX161394 BX161487 AK303508	-92624	+	AK293717 BX248043 TSC_hg19_v1_chr14_-_35591728	-92786	-	AK000651 AK225512 AK225447 TSC_hg19_v1_chr14_-_35591505 BC063438 BC100021 AY157304 AY157305 NM_017917	-92998	-	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	77095	+	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	77167	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	189448	-	AK301931|KIAA0391|9692|KIAA0391##BC044580|KIAA0391|9692|KIAA0391##BC001542|KIAA0391|9692|KIAA0391##AK304066|KIAA0391|9692|KIAA0391##BC032221|KIAA0391|9692|KIAA0391##NM_014672|KIAA0391|9692|KIAA0391##AB002389|KIAA0391|9692|KIAA0391##BX161394|KIAA0391|9692|KIAA0391##BX161487|KIAA0391|9692|KIAA0391##AK303508|KIAA0391|9692|KIAA0391##AK293717|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BX248043|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK000651|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK225512|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK225447|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BC063438|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BC100021|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AY157304|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AY157305|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##NM_017917|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	0.259551	CTCF.p2:-12:0.260
chr15	75336009	75336132	reg1002775.p3	6.726	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-20089	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-20142	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-48163	+	AK128205 TSC_hg19_v1_chr15_+_75491259	155176	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	158142	+	BC110367 TSC_hg19_v1_chr15_+_75494233	158163	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.096109	
chr14	106585987	106586107	reg1021354.p1	6.725	+	DQ454787 U64487 AF460704 AF460740 AF460807 DQ454554 AL389978 FJ385400 DQ454728 DQ454993 DQ454902 GQ232943 GU552699 AY003824 AY003849 DQ454431 EF566904 AY003777 DQ454493 DQ454848 GU552714 GU552717 DQ454498 DQ454515 DQ454965 DQ523862 EF407823 DQ454754 DQ454849 DQ454990 FJ840311 FJ840313 FJ840317 FJ840329 FJ840349 FJ873842 FJ873857 FJ873909 FJ873912 FJ873925 FJ874051 FJ874081 FJ874083 FJ874089 HM116118 AY003786 EU433870 EF175391 EF175399 EF175431 EF175439 EF441746 EU433865 EU667604 EU099143 EU099237 EU099244 EU099063 EU099194 EU099113 EU099200 AM183985 AM183986 EU099292 HQ392870 AF103124 DQ100718 AF103028 AF103040 AF103322 HM774410 L07309 L07310 L07312 JN110741 L03824 L03825 L04325 HM774027 HM774097 HM774142 HM774318 HM774446 HM774453 HM774557 HM774576 HM774604 HM774628 HM774645 HM774671 HM774698 HM774809 HM774847 HM774858 HM775011 HM775058 AF165102 HM775038 HM775039 HM775042 AF082199 EU146392 EU146393 EU146395 AY376083 AY376084 AF103217 AY485363 DQ100667 DQ926397 DQ926487 AF062294 DQ187521 DQ187649 DQ523968 DQ523986 DQ524059 DQ926170 DQ926613 GU570296 GU570301 HM995316 HM995318 HM995367 HM995592 HM995658 HM995661 HM995663 HM995671 HM995696 HM995697 HM995699 HM995792 HM995793 HM995795 HM995911 HM995912 HM995913 HM995914 HM995915 HM995916 HM995917 HM995918 HM996161 HM996278 DQ187668 DQ322752 DQ322795 DQ322799 DQ322834 DQ322835 DQ322836 DQ322837 DQ322838 DQ322839 DQ322840 DQ322841 DQ322842 DQ322843 DQ322847 DQ322848 DQ322849 DQ322850 DQ322851 DQ322852 DQ322853 DQ322854 DQ322907 DQ322908 DQ322924 DQ322985 DQ322986 DQ322987 DQ840668 DQ840696 DQ840724 DQ840738 DQ840869 DQ840885 DQ840898 DQ840902 DQ926246 DQ926249 DQ926313 DQ926315 AB063717 AB063810 AB066882 AB066982 AB067264 AB067265 AB363130 AB363133 AB363178 AB363229 AB363239 AF234248 AJ306671 AY033239 AY033240 AY376073 AY376086 AY376088 AY422530 AY530313 AY640532 AY846271 AY971070 AY971132 AY986395 AY986402 DQ065641 DQ065715 DQ100950 DQ926227 DQ926469 DQ926491 DQ926596 EF178046 EU549734 FJ195526 GU570302 HQ378386 Z46761 AB021522 AB063668 AB363134 AB363177 AB363231 AF021996 AF035794 AF115122 AF119800 AF119801 AF119802 AF119803 AF119804 AF151704 AF174095 AF471243 AF471244 AF471245 AF471248 AF471251 AF471252 AF471253 AJ389186 AJ414018 AJ555260 AJ579155 AJ579190 AJ579223 AJ579232 AJ579237 AJ627246 AY530315 AY685254 AY971117 DQ065650 DQ100894 DQ100911 DQ205140 DQ205152 DQ212511 DQ431495 DQ535391 DQ535412 DQ535423 DQ535428 DQ840729 DQ840811 DQ926123 DQ926333 DQ926625 EF178050 EF633766 EF633767 EF633768 EF633798 FJ492898 GU570300 GU570349 S77136 U64493 U64507 U85230 U96395 X62972 X63081 X64241 X99352 X99366 Z96969 Z96970 Z97036 HM995655 HM995787 HM995788 HM995789 HM995870 L33033 X67907 AY392930 AY393153 AY393157 AY393162 L08089 AF062269 L06912 S72664 X65897 X81736 X81744 X81754 Z11959 BC090940 X61013 X61014 BC073758 AK097320 AK125582 AK130539 AK130586 AK130844 AK301403 TSC_hg19_v1_chr14_-_106573761	-12492	-	AF028100 AF460781 AF460830 DQ523918 DQ454686 DQ454784 AY003751 GQ232926 GQ232842 DQ454536 DQ454572 DQ454577 DQ523874 GU552698 DQ100996 AY003834 AY003866 DQ454881 DQ454918 GQ232935 GU552747 AY003780 DQ454841 DQ523891 FJ694882 FJ839966 FJ839976 FJ839978 FJ839985 FJ839992 FJ840024 FJ840027 FJ840030 FJ840039 FJ840068 FJ840074 FJ840076 FJ840077 FJ840081 FJ840084 FJ840087 FJ840121 FJ840122 FJ840152 FJ840211 FJ840345 FJ840372 FJ840374 FJ840382 FJ840393 FJ873873 FJ873898 FJ873903 FJ873918 FJ873976 FJ873981 FJ874020 FJ874039 FJ874070 AJ008190 AY003813 AY003814 EF175404 EF091903 EF091904 EF175384 EU350416 EU350417 AF035027 EU099275 EU099133 AM183981 AM183982 AM183983 HQ704031 HM774241 L04343 U63211 AF103184 FJ385385 HM774328 HM774349 HM774514 HM774642 HM774682 HM774840 HM774998 HQ704030 HQ704032 HQ704033 HQ704034 AF032360 HM774930 S56184 L03385 Y15773 AJ306670 AY376085 DQ926534 HM994910 HM995374 HM995381 AB063655 AB063669 AB063676 AB063796 AB063804 AB063927 AB066885 AB066886 AB066890 AB066980 AB066983 AB067006 AB067010 AB067016 AB067028 AB067069 AB067083 AB067103 AB067234 AB067266 AB363180 AF174058 AF174062 AJ306669 AJ309318 AM279602 AY376074 AY376080 AY944687 DQ100830 DQ100852 DQ100869 DQ100889 DQ100935 DQ926042 DQ926211 DQ926238 DQ926293 DQ926337 DQ926445 DQ926545 DQ926589 DQ926594 DQ926641 EF177963 EF177965 EU117415 FJ385303 FJ385304 FJ385360 FJ490203 GU570287 GU570291 GU570293 GU570294 HM994902 HM994970 HM994971 HM994973 HM994974 HM994975 HM994976 HM994999 HM995000 HM995001 HM995002 HM995003 HM995005 HM995006 HM995007 HM995008 HM995009 HM995010 HM995011 HM995229 HM995234 HM995240 HM995300 HM995301 HM995302 HM995303 HM995305 HM995350 HM995352 HM995354 HM995372 HM995378 HM995379 HM995382 HM995383 HM995384 HM995385 HM995386 HM995423 HM995430 HM995431 HM995449 HM995453 HM995454 HM995455 HM995458 HM995459 HM995507 HM995509 HM995510 HM995511 HM995575 HM995632 HM995835 HM995836 HM995838 HM995839 HM995840 HM995841 HM995954 HM996284 HM996494 HQ378378 U07985 Z18834 X98899 AB021529 AB021539 AF035796 AF471223 AF471224 AF471226 AF471227 AF471231 AF471235 AF471238 AF471239 AJ239353 AJ245321 AJ579149 AJ579153 AJ579156 AJ579215 AJ579229 AJ617571 AY379733 AY941939 D83676 D83677 DQ225095 DQ535264 DQ535301 DQ535363 DQ535409 DQ535438 DQ535483 EF633755 EF633756 EF633757 EF633758 EF633787 EF633789 EF633790 EF633816 EU835550 EU835551 GU570285 GU570286 HM152494 U00488 U00506 U00546 U00577 U00588 X62968 X62969 X63080 X64239 X73605 X79166 X99360 Z18318 Z33899 Z33901 Z14176 Z14171 AY994080 EU883655 DQ234395 DQ234396 DQ234397 DQ234398 DQ234399 DQ234401 EU883644 EU883645 EU883646 EU883647 EU883648 EU883649 EU883650 EU883651 EU883652 EU883653 EU883654 EU883656 EU883657 EU883658 EU883659 L23565 X53613 Z80840 CU675389 CU676902 BC021276 BC006402 TSC_hg19_v1_chr14_-_106552810 AK097367 AK123546 AK128565 AK128625 AK129508 BX640627	-33486	-	U49659 U32203 U32487 U32607 U32954 U33784 AF028116 AF267845 AJ437672 AJ437673 AJ437676 AJ437677 AY155561 AY155552 AY155553 AY155554 AY155555 AY155556 AY155558 AY155559 AY155560 DQ454893 DQ454501 DQ454556 AY003840 DQ454563 DQ454673 DQ454929 DQ454579 DQ454828 DQ523913 DQ454847 AF017458 FJ873972 FJ873986 HM995044 AJ487486 FJ694876 GQ232843 AF209886 AJ007327 AF209893 HQ392873 AF343406 AM279474 AM279478 AM279560 AM279563 AF308547 AF308555 HM773982 HM775023 AY515010 JN110874 L04323 HM774154 HM774400 HM774451 HM774458 HM774741 HM774744 HM774802 HM774806 HM775008 HM775009 HM775022 DQ097897 EU099249 AB067193 HM995129 AM183997 AY393237 AY393510 AY393524 AY193810 AY392846 AY392882 AY393110 AY393131 AY393136 AY393222 AY393234 AY393247 AY393248 AY393260 AY393499 AY393502 AY393529 AY393530 AY393534 AY393607 AY393631 AY393634 HM996282 HM996256 DQ100826 AF062290 DQ100689 DQ523985 EU620053 GU570225 HM995043 HM995045 HM995046 HM995047 HM995049 HM995050 HM995122 HM995127 HM995128 HM995148 HM995149 HM995150 HM995151 HM995152 HM995153 HM995154 HM995155 HM995208 HM995254 HM995311 HM995312 HM995363 HM995366 HM995694 HM995695 HM995698 HM995700 HM995703 HM995706 HM995708 HM995973 HM995974 HM995975 HM995976 HM995980 HM995983 HM995988 HM995989 HM995993 HM996202 HM996204 HM996241 HM996510 AB066887 AB067030 AB067098 AB067233 AF115112 AF115117 AF174060 AJ306682 AY376094 AY515000 DQ926131 DQ926568 DQ926621 EF178040 FJ195456 FJ195503 Z92895 Z92896 AB063690 AB063704 AB063736 AB066827 AB066831 AB066838 AB067161 AB067182 AB067304 AB067306 AB067324 AB289325 AB289327 AF021988 AF115130 AJ617574 AY640556 AY781858 AY971028 AY971058 AY971094 DQ005271 DQ100828 DQ100854 DQ205183 DQ535305 DQ768422 DQ926187 DQ926367 DQ926378 DQ926488 FJ385322 GU570224 HM152497 JN158499 M26435 U00547 U00560 U00561 Z18321 Z97032 DQ926181 DQ535306 DQ535339 EF178019 EF178022 FJ195500 FJ195523 L26892 HM995872 HM995895 HM995898 HM995899 AF062115 AF062177 AF062190 AF062211 AF062222 AF062223 AF062261 AF062263 AY392866 U43760 X65919 Z47216 Z47238 Z47240 BC067091 AF283666 BC075846 BC037361 Z14165 Z14166 Z14167 TSC_hg19_v1_chr14_-_106539571 AK097906 AK301334	-46708	-	GU552766 DQ454945 DQ454680 DQ454800 DQ100736 HQ392877 AY062313 JN110910 JN111168 L03821 L04324 FJ385334 FJ385335 HM774019 HM774079 HM774175 HM774429 HM774436 HM774460 HM774566 HM774691 HM774780 HM774984 AF165105 AY062308 DQ100831 AJ300807 AB063700 AY423173 AY062309 DQ100870 GU570344 HM994897 HM994907 HM994915 HM995019 HM995419 HM995424 HM995733 HM995761 HM995921 HM995935 HM995953 HM996087 HM996247 HM996409 DQ840731 DQ840896 AB374202 AM279603 AY866783 DQ431491 EF178033 FJ385392 GU570335 AB021538 AB063673 AB066975 AB067002 AB067017 AB067076 AB067261 AB363102 AB363150 AF062210 AF098364 AF174056 AF174100 AF174120 AF301484 AF455549 AF471257 AF471259 AF471261 AF471262 AF471264 AF471363 AF471478 AF471487 AF471497 AJ007956 AJ389180 AJ399809 AJ413989 AJ555276 AJ556639 AJ579273 AM040537 AY268370 AY466509 AY685302 AY685304 AY921574 AY921575 AY927662 AY941906 D83675 DQ065617 DQ065728 DQ535267 DQ535281 DQ535298 DQ535334 DQ535408 DQ535485 DQ926436 DQ926504 DQ926507 DQ926513 DQ926550 EF178020 GU570303 GU570338 GU570343 GU570348 L33984 S65535 Z33898 AY670714 HM995884 AF062141 L03683 L38431 X65894 X81740 M18515 BC053984 TSC_hg19_v1_chr14_-_106586668	454	-	AF028103 AF028108 Z11951 FJ840130 AF460713 AF460734 DQ454527 DQ454388 DQ454699 GQ232866 DQ454529 GQ232862 GQ232892 GU552777 EF407836 AY003841 DQ454714 GU552715 GU552744 DQ454664 DQ454668 DQ454679 DQ454889 DQ523850 AF209741 FJ385398 FJ873853 GU552716 GU552740 FJ840399 FJ840405 FJ873982 FJ840136 FJ840137 FJ840146 FJ873844 FJ873859 FJ873968 AJ008185 AJ008243 DQ454505 AY003713 AY003823 AY003842 EU433861 AF103214 EF441758 AF209733 AF209739 M18511 EU099088 EU099091 EU099108 EU099125 EU099214 DQ100874 AF103360 AF103031 AF103055 AF103172 AF103027 AY062317 HM773987 JN110484 JN110743 JN110870 JN110880 JN110904 JN111065 FJ385409 FJ385427 GQ504866 HM774017 HM774087 HM774308 HM774638 HM774746 HM774912 HM774921 AF032354 AF103227 AF103255 AF082194 EU146316 EU146375 EU146379 EU146381 EU146388 EU146390 EU146391 AJ271553 AJ300806 DQ926562 L38566 AB066857 HM995144 AF035789 AF035799 AF035798 L26034 AF062296 AF062303 AF471268 DQ454900 DQ524054 HM995097 HM995098 HM995245 HM995265 HM995270 HM995272 HM995274 HM995569 HM995686 HM995688 HM995689 HM995690 HM995691 HM995692 HM995930 HM995937 HM995946 HM996125 HM996208 HM996383 HM996458 DQ322777 DQ840774 DQ840820 DQ840842 DQ840897 AJ278771 AY686927 AY866567 AY998725 DQ100923 DQ100931 DQ926186 DQ926328 DQ926496 EF178079 FJ195531 FJ195532 FJ385300 FJ385301 FJ385374 FJ385399 HM995143 L39128 X79165 AB021509 AB021517 AB021528 AB021540 AB063657 AB063800 AB063845 AB066984 AB067025 AB067128 AB363162 AB363202 AB363206 AB373605 AB373606 AB373610 AB373616 AB373630 AB373634 AF021972 AF035026 AF174091 AF471269 AF471270 AF471271 AF471274 AF471276 AF471277 AF471278 AF471279 AJ249632 AJ401163 AJ401164 AJ556720 AJ579094 AJ579101 AJ579115 AJ579140 AJ579160 AJ579180 AJ579219 AJ579227 AJ579235 AJ579263 AJ579275 AJ579285 AJ627238 AY055479 AY376081 AY971142 D83688 D83689 DQ065634 DQ535287 DQ535290 DQ535292 DQ535322 DQ535337 DQ535365 DQ535372 DQ535396 DQ535403 DQ535404 DQ926160 DQ926428 DQ926446 DQ926474 DQ926484 DQ926537 DQ926556 EF028218 EF178024 FJ195520 FJ195538 FJ385323 GU570304 HM152485 HQ689757 U97245 X62954 X62960 X87453 X99364 Y12699 Z18319 Z18322 Z18323 Z75557 Z98737 Z98738 Z98739 Z98740 AJ401161 M34023 L14818 X56523 X56524 AF431053 AF431055 Z14169 AY505570 X81723 X81743 Z14216 Z80843 L29153 L29154 Z14960 M34032 BC065820 BC014667 TSC_hg19_v1_chr14_-_106610847 AK123981 AK301228 AK130434 AK289373	24548	-	U32483 U32956 AF028093 AF028101 AF028111 FN562934 FN562935 FN562936 FN562938 FN562940 FN562941 FN562942 FN562943 FN562969 FN562970 FN562971 FN562972 FN562973 FN562974 FN562976 FN562977 FN562978 FN562979 FN562980 FN562981 FN562982 FN562983 FN564030 AY393108 GU552686 DQ926435 GU552684 GU552688 GU552757 GU552781 GU552690 AY003829 DQ454593 DQ454964 GU552735 FJ839984 FJ873855 FJ873870 FJ873978 FJ874013 HM116198 HM116220 AY003773 AY466515 EF091911 EF175403 EU667600 GQ232801 GQ232810 GQ232870 GQ232884 GQ232937 GQ232940 GU358677 DQ454763 L33029 AB063742 AB063753 AF209885 AJ007326 AY998724 EU099272 AF343408 AM279479 AM279486 AM279587 AM279589 AF103137 AF103300 AF103139 AY640542 HM774290 HM774693 HQ704036 JN111131 JN111139 JN111144 JN111184 JN111186 JN111187 JN111191 JN111197 JN111211 GQ504857 GQ504898 HM774123 HM774196 HM774674 JN110995 AY515008 HM774096 HM774295 HM774432 HM774654 HM774929 JN110663 JN110917 JN110945 JN110948 JN111032 JN111172 L04345 EF177943 FJ385330 FJ385333 FJ385428 HM774077 HM774081 HM774160 HM774325 HM774354 HM774361 HM774528 HM774594 HM774651 HM774665 HM774673 HM774683 HM774694 HM774869 HM774922 HQ704035 AF103230 AF103158 AF103095 AF103101 AF103237 AF103326 DQ926493 DQ097894 DQ097898 EF624133 EF624134 EF624137 EF624139 EU099193 EU146334 EU146384 AF103118 FJ385354 AY393014 EU099058 EU099190 HM995112 AY393019 L12067 L12070 AY393221 AY393225 AY393230 AY393244 AY393245 AY393246 AY393253 AY393261 AY393265 AY393272 AY393339 AY393362 AY393364 AY393494 AY393498 AY393507 AY393512 AY393521 AY393526 AY393527 AY393537 AY393658 AY393663 AY393681 EF177942 EF178122 AY640486 AF022009 AF062293 AF062306 AY685298 AY866751 AY941910 AY941960 DQ100669 DQ100695 DQ100823 DQ101000 DQ523958 GU570214 GU570234 GU570240 GU570244 HM994961 HM995031 HM995113 HM995115 HM995117 HM995118 HM995409 HM995411 HM995412 HM995413 HM995414 HM995415 HM995428 HM995461 HM995728 HM996035 HM996132 HM996228 HM996503 HM996531 HM996549 HQ378367 U64480 AB066989 AB067026 AB363145 AB363159 AY033251 AY033263 AY033264 AY941851 AY941917 DQ065675 DQ065679 DQ065695 DQ926155 DQ926171 DQ926203 DQ926402 DQ926411 DQ926472 DQ926480 DQ926481 DQ926483 DQ926540 DQ926542 DQ926549 EF177954 EF178002 EF178074 EF178082 EU794408 EU794435 FJ195464 FJ195469 FJ195474 FJ385305 FJ385319 FJ385363 FJ385390 FM160411 HQ378352 Z92891 AB063681 AB063682 AB063683 AB063684 AB063688 AB063689 AB063692 AB063693 AB063694 AB063695 AB063696 AB063702 AB063710 AB063718 AB063722 AB063725 AB063737 AB063738 AB063739 AB063746 AB063748 AB063786 AB063788 AB063795 AB063814 AB063816 AB063817 AB063819 AB063820 AB063821 AB063823 AB063825 AB063870 AB063904 AB063923 AB066999 AB067155 AB067156 AB067160 AB067163 AB067165 AB067171 AB067179 AB067302 AB067303 AB067332 AB067397 AF021967 AF021968 AF062199 AF062246 AF115131 AF115132 AF115133 AF115134 AF174092 AF174102 AF174123 AJ239345 AJ293739 AJ293740 AJ413994 AJ414022 AY530314 AY530319 AY971114 DQ065688 DQ100806 DQ926283 DQ926285 DQ926517 GU570230 GU570235 GU570236 GU570237 GU570238 GU570242 HM995881 HQ689758 JN158093 U00500 U00503 U00542 U00589 U64484 U77375 X61647 X91804 Z18832 Z18851 Z46855 DQ535265 DQ535277 DQ535295 DQ535369 DQ535473 EF177949 EF178045 EF178047 EF178059 EF178069 HM995648 HM995649 HM995876 AF026930 AF062147 AF062150 AF062212 AF062265 AF174028 L38435 M28136 X15611 X60504 Z14963 BC073789 BC051319 BC051328 TSC_hg19_v1_chr14_-_106642052 AK301327 AK301389 BC005951 BX640625 BX640626	55773	-	AL389978|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BC090940|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073758|IGHM|3507|immunoglobulin heavy constant mu##AK097320|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125582|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130539|IGHM|3507|immunoglobulin heavy constant mu##AK130586|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130844|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301403|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC021276|IGHD|3495|immunoglobulin heavy constant delta##BC006402|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097367|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123546|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128565|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128625|IGHD|3495|immunoglobulin heavy constant delta##AK129508|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640627|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC067091|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF283666|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC075846|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC037361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097906|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC065820|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC014667|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130434|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073789|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC051328|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK301327|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301389|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC005951|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640625|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BX640626|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.141911	
chr19	3343877	3343972	reg1021957.p1	6.725	+	BC047522 DQ891648 DQ894837 TSC_hg19_v1_chr19_+_3224751 CU690430 AF329266	-119181	+	BC028101 NM_021938 AB209067 NM_001172673 TSC_hg19_v1_chr19_+_3224705	-119220	+	TSC_hg19_v1_chr19_+_3198814 BC008920	-145099	+	TSC_hg19_v1_chr19_+_3359531 NM_001245005 NM_205843 X12492 AK304816 AK289885	15532	+	TSC_hg19_v1_chr19_+_3366562 NM_001245002 NM_001245004 NM_005597 BC012120	22631	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	22656	+	BC047522|CELF5|60680|CUGBP, Elav-like family member 5##DQ891648|CELF5|60680|CUGBP, Elav-like family member 5##DQ894837|CELF5|60680|CUGBP, Elav-like family member 5##AF329266|CELF5|60680|CUGBP, Elav-like family member 5##BC028101|CELF5|60680|CUGBP, Elav-like family member 5##NM_021938|CELF5|60680|CUGBP, Elav-like family member 5##AB209067|CELF5|60680|CUGBP, Elav-like family member 5##NM_001172673|CELF5|60680|CUGBP, Elav-like family member 5##BC008920|NCLN|56926|nicalin##NM_001245005|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_205843|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X12492|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK304816|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK289885|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245002|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245004|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_005597|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC012120|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)	0.141411	
chr10	3917342	3917499	reg1014388.p1	6.724	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-89911	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-90109	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-702415	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	950998	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1088094	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1088203	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr16	31276651	31276832	reg1020456.p1	6.724	+	TSC_hg19_v1_chr16_+_31271330 AK127637 AB384734	-5387	+	TSC_hg19_v1_chr16_+_31271311 J03925 BC096346 BC096347 BC096348 BC099660	-5424	+	TSC_hg19_v1_chr16_+_31271295 AK057856 NM_000632 NM_001145808 M18044	-5448	+	TSC_hg19_v1_chr16_+_31366508 AK296666 AK309642 NM_000887	89751	+	TSC_hg19_v1_chr16_+_31366521 M81695	89781	+	TSC_hg19_v1_chr16_+_31366549 BC037577 BC038237 DQ892486 DQ895697	89810	+	AK127637|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##J03925|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096346|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096347|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096348|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC099660|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##AK057856|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##NM_000632|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##NM_001145808|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##M18044|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##AK296666|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##AK309642|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##NM_000887|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##M81695|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##BC037577|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##BC038237|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ892486|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ895697|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)	0.469167	CTCF.p2:-101:0.455
chr3	133916624	133916776	reg1023129.p1	6.724	+	BC051347 TSC_hg19_v1_chr3_-_133748836 NM_005630	-167827	-	U70867 BC041140 AK303550 AK309561 TSC_hg19_v1_chr3_-_133748770	-167950	-	AK025826 AK225383 BC051274 BC064502 BC082257 NM_025041	-268114	-	TSC_hg19_v1_chr3_-_133969397 AB527382	52764	-	TSC_hg19_v1_chr3_-_133969650 NM_001005861 NM_002958 X69970 X96588	52926	-	TSC_hg19_v1_chr3_-_134093290 AK223598 AK001343 AB023206 AK291616 NM_016201	176665	-	BC051347|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##NM_005630|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##U70867|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##BC041140|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK303550|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK309561|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK025826|C3orf36|80111|chromosome 3 open reading frame 36##AK225383|C3orf36|80111|chromosome 3 open reading frame 36##BC051274|C3orf36|80111|chromosome 3 open reading frame 36##BC064502|C3orf36|80111|chromosome 3 open reading frame 36##BC082257|C3orf36|80111|chromosome 3 open reading frame 36##NM_025041|C3orf36|80111|chromosome 3 open reading frame 36##NM_001005861|RYK|6259|RYK receptor-like tyrosine kinase##NM_002958|RYK|6259|RYK receptor-like tyrosine kinase##X69970|RYK|6259|RYK receptor-like tyrosine kinase##X96588|RYK|6259|RYK receptor-like tyrosine kinase##AK223598|AMOTL2|51421|angiomotin like 2##AK001343|AMOTL2|51421|angiomotin like 2##AB023206|AMOTL2|51421|angiomotin like 2##AK291616|AMOTL2|51421|angiomotin like 2##NM_016201|AMOTL2|51421|angiomotin like 2	0.980849	CTCF.p2:0:0.981
chr4	118369235	118369327	reg1020847.p1	6.724	+	AK074617 BC030831 NM_152402	-362548	-	BC113075 BC012326 AK289670 AB036429 NM_022569	-2334300	-	NM_003360 U30930	-2825759	+	TSC_hg19_v1_chr4_+_118954764 AY358852	585490	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	586294	+	TSC_hg19_v1_chr4_+_119199912 BC017993 BC039555	830636	+	AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC017993|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##BC039555|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)	0.990869	CTCF.p2:-4:0.991
chr4	47566456	47566632	reg1021437.p1	6.724	+	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	-79214	+	TSC_hg19_v1_chr4_-_47465720 BC008371	-100816	-	TSC_hg19_v1_chr4_-_47465683 AY542163 BC015145 NM_017845 AK000509 BC019826 AF182421	-100865	-	TSC_hg19_v1_chr4_+_47708352 D28417	141810	+	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	273546	-	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	350051	-	BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D##BC008371|COMMD8|54951|COMM domain containing 8##AY542163|COMMD8|54951|COMM domain containing 8##BC015145|COMMD8|54951|COMM domain containing 8##NM_017845|COMMD8|54951|COMM domain containing 8##AK000509|COMMD8|54951|COMM domain containing 8##BC019826|COMMD8|54951|COMM domain containing 8##AF182421|COMMD8|54951|COMM domain containing 8##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1	0.997396	CTCF.p2:18:0.997
chrX	7007134	7007255	reg1021622.p2	6.724	+	AF167078 AF167079 NM_016379	-554036	-	AK055471 BC034018 NM_181332	-860514	-	AB033086 AF376803 AX773938 NM_020742	-861307	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	58757	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	58998	-	NM_000351 M16505 J04964 AK314034	130307	+	AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S	0.829158	CTCF.p2:14:0.751
chrX	70218461	70218571	reg1021625.p1	6.724	+	AF320612 BC033816 AX721169 BC021242 AK074865 AK075014 NM_001048164 NM_032803	-67567	-	AK057523 AK292471 BC036016 NM_001003811 NM_031276	-89953	-	TSC_hg19_v1_chrX_+_69674948 AK303377 NM_001166278	-543582	+	BT007203 TSC_hg19_v1_chrX_-_70288224 BC080535 AF171229 BC103847 BC103848 BC020559 NM_013346 AK312977	69684	-	TSC_hg19_v1_chrX_+_70316026 NM_001170931 NM_005938 AK300142 X93996 BC106761 AB463650 AF384029	97491	+	NM_001025265	108121	-	AF320612|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##BC033816|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK074865|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK075014|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_001048164|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_032803|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK057523|TEX11|56159|testis expressed 11##AK292471|TEX11|56159|testis expressed 11##BC036016|TEX11|56159|testis expressed 11##NM_001003811|TEX11|56159|testis expressed 11##NM_031276|TEX11|56159|testis expressed 11##AK303377|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_001166278|DLG3|1741|discs, large homolog 3 (Drosophila)##BT007203|SNX12|29934|sorting nexin 12##BC080535|SNX12|29934|sorting nexin 12##AF171229|SNX12|29934|sorting nexin 12##BC103847|SNX12|29934|sorting nexin 12##BC103848|SNX12|29934|sorting nexin 12##BC020559|SNX12|29934|sorting nexin 12##NM_013346|SNX12|29934|sorting nexin 12##AK312977|SNX12|29934|sorting nexin 12##NM_001170931|FOXO4|4303|forkhead box O4##NM_005938|FOXO4|4303|forkhead box O4##X93996|FOXO4|4303|forkhead box O4##BC106761|FOXO4|4303|forkhead box O4##AF384029|FOXO4|4303|forkhead box O4##NM_001025265|CXorf65|158830|chromosome X open reading frame 65	0.016818	
chr13	20139057	20139214	reg1024572.p1	6.723	+	BC128146 BC128147 AJ421032 AY219890 NM_001141968 NM_130785 NM_199254	-28242	-	BC011721 NM_006001	-383173	-	None	None	None	TSC_hg19_v1_chr13_+_20207808 AK300258 NM_017520 BC017322 AK092556 AX747597 AL832864 BC003542	68700	+	TSC_hg19_v1_chr13_-_20346399 AL834505	207305	-	CR457272 DQ892679 DQ895922 AB528394 AF448795 AF449627 TSC_hg19_v1_chr13_-_20357042	217780	-	BC128146|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##BC128147|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AJ421032|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AY219890|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_001141968|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_130785|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_199254|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##BC011721|TUBA3C|7278|tubulin, alpha 3c##NM_006001|TUBA3C|7278|tubulin, alpha 3c##AK300258|MPHOSPH8|54737|M-phase phosphoprotein 8##NM_017520|MPHOSPH8|54737|M-phase phosphoprotein 8##BC017322|MPHOSPH8|54737|M-phase phosphoprotein 8##AK092556|MPHOSPH8|54737|M-phase phosphoprotein 8##AL832864|MPHOSPH8|54737|M-phase phosphoprotein 8##BC003542|MPHOSPH8|54737|M-phase phosphoprotein 8##AL834505|PSPC1|55269|paraspeckle component 1##CR457272|PSPC1|55269|paraspeckle component 1##DQ892679|PSPC1|55269|paraspeckle component 1##DQ895922|PSPC1|55269|paraspeckle component 1##AF448795|PSPC1|55269|paraspeckle component 1##AF449627|PSPC1|55269|paraspeckle component 1	0.758439	CTCF.p2:10:0.677
chr16	56237083	56237188	reg1021868.p1	6.723	+	AK056008 TSC_hg19_v1_chr16_+_56225314	-11825	+	NM_020988 NM_138736 TSC_hg19_v1_chr16_+_56225253	-11884	+	AK294334 NM_001190158	-247193	-	AF124145 TSC_hg19_v1_chr16_-_56459357	222194	-	TSC_hg19_v1_chr16_-_56459390 NM_001144 BC069197	222288	-	AJ001810 CR456919 AB590091 AM392991 AM393219 DQ892142 DQ895336 TSC_hg19_v1_chr16_-_56485242 BC001403 BX647665 NM_007006 AK312721 BX537360	248075	-	AK056008|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_020988|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_138736|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##AK294334|CES5A|221223|carboxylesterase 5A##NM_001190158|CES5A|221223|carboxylesterase 5A##AF124145|AMFR|267|autocrine motility factor receptor##NM_001144|AMFR|267|autocrine motility factor receptor##BC069197|AMFR|267|autocrine motility factor receptor##AJ001810|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##CR456919|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AM392991|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AM393219|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ892142|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ895336|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BC001403|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BX647665|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##NM_007006|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AK312721|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BX537360|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	0.860216	CTCF.p2:19:0.860
chr8	142085765	142085863	reg1019272.p2	6.723	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-74558	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-440190	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-564251	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	52923	+	AK128212 NM_001080431	152858	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	178376	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.999493	CTCF.p2:-32:0.999
chr1	45259480	45259582	reg1021178.p1	6.722	+	AF440757 AY515707 BC101823 NM_153274	-6131	-	AK311854 D28361 NM_001012 BC022070 BC070875	-18280	+	TSC_hg19_v1_chr1_+_45205568 AK290688 AB590244 BT006759 CR450302 CU677119 CU679091 DQ893800 EU176178	-53950	+	AJ293866 TSC_hg19_v1_chr1_+_45266017	6425	+	BC013899 NM_004073 TSC_hg19_v1_chr1_+_45266045	6510	+	TSC_hg19_v1_chr1_+_45266048 AB209875 EU832631 EU832706 BC004135 BC004198 BC013960 U56998	6601	+	AF440757|BEST4|266675|bestrophin 4##AY515707|BEST4|266675|bestrophin 4##BC101823|BEST4|266675|bestrophin 4##NM_153274|BEST4|266675|bestrophin 4##AK311854|RPS8|6202|ribosomal protein S8##NM_001012|RPS8|6202|ribosomal protein S8##BC022070|RPS8|6202|ribosomal protein S8##BC070875|RPS8|6202|ribosomal protein S8##AK290688|KIF2C|11004|kinesin family member 2C##BT006759|KIF2C|11004|kinesin family member 2C##CR450302|KIF2C|11004|kinesin family member 2C##DQ893800|KIF2C|11004|kinesin family member 2C##EU176178|KIF2C|11004|kinesin family member 2C##AJ293866|PLK3|1263|polo-like kinase 3##BC013899|PLK3|1263|polo-like kinase 3##NM_004073|PLK3|1263|polo-like kinase 3##AB209875|PLK3|1263|polo-like kinase 3##EU832631|PLK3|1263|polo-like kinase 3##EU832706|PLK3|1263|polo-like kinase 3##BC004135|PLK3|1263|polo-like kinase 3##BC004198|PLK3|1263|polo-like kinase 3##BC013960|PLK3|1263|polo-like kinase 3##U56998|PLK3|1263|polo-like kinase 3	0.0	
chr3	138051448	138051539	reg1020131.p1	6.722	+	AK094830 NM_178130	-2766	-	TSC_hg19_v1_chr3_+_137906372 NM_014154 NM_015396 NM_213654 BC032661 AK296757 AK299769 AF161541 AK304558 AK296837 BC013424 AF109184 AK289577 BC041699	-145150	+	AF180919 TSC_hg19_v1_chr3_-_137893764 NM_016216	-157724	-	NM_001252091 NM_012219 AK124954	15020	+	TSC_hg19_v1_chr3_+_138067476 NM_001085049 NM_001252093 BC047690 AF043938	16018	+	TSC_hg19_v1_chr3_+_138067711 AK295640 NM_001252092	16225	+	AK094830|NME9|347736|NME gene family member 9##NM_178130|NME9|347736|NME gene family member 9##NM_014154|ARMC8|25852|armadillo repeat containing 8##NM_015396|ARMC8|25852|armadillo repeat containing 8##NM_213654|ARMC8|25852|armadillo repeat containing 8##BC032661|ARMC8|25852|armadillo repeat containing 8##AK296757|ARMC8|25852|armadillo repeat containing 8##AK299769|ARMC8|25852|armadillo repeat containing 8##AF161541|ARMC8|25852|armadillo repeat containing 8##AK304558|ARMC8|25852|armadillo repeat containing 8##AK296837|ARMC8|25852|armadillo repeat containing 8##BC013424|ARMC8|25852|armadillo repeat containing 8##AF109184|ARMC8|25852|armadillo repeat containing 8##AK289577|ARMC8|25852|armadillo repeat containing 8##BC041699|ARMC8|25852|armadillo repeat containing 8##AF180919|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##NM_016216|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##NM_001252091|MRAS|22808|muscle RAS oncogene homolog##NM_012219|MRAS|22808|muscle RAS oncogene homolog##AK124954|MRAS|22808|muscle RAS oncogene homolog##NM_001085049|MRAS|22808|muscle RAS oncogene homolog##NM_001252093|MRAS|22808|muscle RAS oncogene homolog##BC047690|MRAS|22808|muscle RAS oncogene homolog##AF043938|MRAS|22808|muscle RAS oncogene homolog##AK295640|MRAS|22808|muscle RAS oncogene homolog##NM_001252092|MRAS|22808|muscle RAS oncogene homolog	0.900784	CTCF.p2:-4:0.901
chr8	115059297	115059375	reg1020348.p1	6.721	+	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	-610207	-	AB114605 NM_198124	-669955	-	BC028739 AK313469 AF167082 NM_014379 AK297393	-4072370	-	TSC_hg19_v1_chr8_-_116680208 AK304046	1620884	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	1621829	-	TSC_hg19_v1_chr8_-_116681365 AF183810	1621999	-	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I	0.997583	CTCF.p2:22:0.998
chr4	110254209	110254325	reg1022068.p1	6.720	+	AF293340 AF293341 NM_032518 NM_198721 TSC_hg19_v1_chr4_-_110223816	-30460	-	AK091888 AX747236 AK294072 AJ298293 AK294235 BC022526 NM_001146590 NM_001146627 NM_031279	-570124	-	AF068297 TSC_hg19_v1_chr4_+_109571786 AK312185 DQ893222 DQ896551 AF343342	-682472	+	TSC_hg19_v1_chr4_+_110354836 AJ131245	100580	+	TSC_hg19_v1_chr4_-_110354918 BC009800	100676	-	BC117135 BC143268 BC143269 BC143276 TSC_hg19_v1_chr4_+_110354970 NM_001042734 NM_006323	100681	+	AF293340|COL25A1|84570|collagen, type XXV, alpha 1##AF293341|COL25A1|84570|collagen, type XXV, alpha 1##NM_032518|COL25A1|84570|collagen, type XXV, alpha 1##NM_198721|COL25A1|84570|collagen, type XXV, alpha 1##AK091888|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294072|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AJ298293|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294235|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##BC022526|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146590|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146627|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_031279|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AF068297|OSTC|58505|oligosaccharyltransferase complex subunit##AK312185|OSTC|58505|oligosaccharyltransferase complex subunit##DQ893222|OSTC|58505|oligosaccharyltransferase complex subunit##DQ896551|OSTC|58505|oligosaccharyltransferase complex subunit##AF343342|OSTC|58505|oligosaccharyltransferase complex subunit##AJ131245|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC009800|1/2-SBSRNA4|100533182|lncRNA_BC009800##BC117135|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143268|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143269|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143276|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_001042734|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_006323|SEC24B|10427|SEC24 family, member B (S. cerevisiae)	0.196593	
chrX	11926618	11926762	reg1022705.p1	6.720	+	NM_006800 AK025642	-148943	+	NM_001193270 AK300814	-149973	+	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	-150347	+	AB002314 NM_014728 AK289694	229900	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	882807	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	882878	+	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2	0.975359	CTCF.p2:-9:0.975
chr5	76535095	76535239	reg1024426.p1	6.719	+	AF079529 AY129948 AY129949 NM_001029851 NM_001029852 NM_001029853 NM_001029854 NM_003719 AB085824 AB085825 AB085826 AB085827 AL831924	-28377	+	AK098256 TSC_hg19_v1_chr5_+_76435100	-100081	+	TSC_hg19_v1_chr5_-_76383029 BC007239 NM_032367 AK223624	-152124	-	TSC_hg19_v1_chr5_-_76788048 AK293316 AK295249 CU691838 AK304329 AK023977 AF115511 BC040241	252899	-	AK296423 AK300058 TSC_hg19_v1_chr5_-_76788142 AK021855	252978	-	TSC_hg19_v1_chr5_-_76788333 AK001766 BC001807 NM_018268	253148	-	AF079529|PDE8B|8622|phosphodiesterase 8B##AY129948|PDE8B|8622|phosphodiesterase 8B##AY129949|PDE8B|8622|phosphodiesterase 8B##NM_001029851|PDE8B|8622|phosphodiesterase 8B##NM_001029852|PDE8B|8622|phosphodiesterase 8B##NM_001029853|PDE8B|8622|phosphodiesterase 8B##NM_001029854|PDE8B|8622|phosphodiesterase 8B##NM_003719|PDE8B|8622|phosphodiesterase 8B##AB085824|PDE8B|8622|phosphodiesterase 8B##AB085825|PDE8B|8622|phosphodiesterase 8B##AB085826|PDE8B|8622|phosphodiesterase 8B##AB085827|PDE8B|8622|phosphodiesterase 8B##AL831924|PDE8B|8622|phosphodiesterase 8B##BC007239|ZBED3|84327|zinc finger, BED-type containing 3##NM_032367|ZBED3|84327|zinc finger, BED-type containing 3##AK223624|ZBED3|84327|zinc finger, BED-type containing 3##AK293316|WDR41|55255|WD repeat domain 41##AK295249|WDR41|55255|WD repeat domain 41##AK304329|WDR41|55255|WD repeat domain 41##AK023977|WDR41|55255|WD repeat domain 41##AF115511|WDR41|55255|WD repeat domain 41##BC040241|WDR41|55255|WD repeat domain 41##AK296423|WDR41|55255|WD repeat domain 41##AK300058|WDR41|55255|WD repeat domain 41##AK021855|WDR41|55255|WD repeat domain 41##AK001766|WDR41|55255|WD repeat domain 41##BC001807|WDR41|55255|WD repeat domain 41##NM_018268|WDR41|55255|WD repeat domain 41	0.554212	CTCF.p2:-11:0.554
chr6	50759753	50759860	reg1020298.p1	6.719	+	AY028376 NM_172238	-78550	+	DQ012016 NM_001037498	-743443	-	DQ012014 DQ012015 NM_001037497 NM_001037728	-770136	-	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	26729	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	1192589	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	1291400	+	AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##DQ012014|DEFB110|245913|defensin, beta 110 locus##DQ012015|DEFB110|245913|defensin, beta 110 locus##NM_001037497|DEFB110|245913|defensin, beta 110 locus##NM_001037728|DEFB110|245913|defensin, beta 110 locus##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A	0.999596	CTCF.p2:4:1.000
chr8	74961211	74961335	reg1021676.p1	6.719	+	NM_001195797 NM_015364 BC020690 AF168121 AB590737 AB446498	-57653	+	NM_001040613 NM_017866 TSC_hg19_v1_chr8_+_74888429 BC002748	-72856	+	TSC_hg19_v1_chr8_-_74884503 BC093065 AL832244 NM_001204857 NM_001204858 NM_001204859 NM_001204860 NM_001204863 NM_001204864 NM_005648	-76762	-	BX537756 BC139832 BC098299 BC098314 BC099736 BC113856 BC114464 NM_020647 BC140875 BC140876	272255	-	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	301417	+	CR749657 NM_015886	775498	+	NM_001195797|LY96|23643|lymphocyte antigen 96##NM_015364|LY96|23643|lymphocyte antigen 96##BC020690|LY96|23643|lymphocyte antigen 96##AF168121|LY96|23643|lymphocyte antigen 96##AB446498|LY96|23643|lymphocyte antigen 96##NM_001040613|TMEM70|54968|transmembrane protein 70##NM_017866|TMEM70|54968|transmembrane protein 70##BC002748|TMEM70|54968|transmembrane protein 70##BC093065|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##AL832244|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204857|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204858|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204859|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204860|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204863|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204864|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_005648|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##BX537756|JPH1|56704|junctophilin 1##BC139832|JPH1|56704|junctophilin 1##BC098299|JPH1|56704|junctophilin 1##BC098314|JPH1|56704|junctophilin 1##BC099736|JPH1|56704|junctophilin 1##BC113856|JPH1|56704|junctophilin 1##BC114464|JPH1|56704|junctophilin 1##NM_020647|JPH1|56704|junctophilin 1##BC140875|JPH1|56704|junctophilin 1##BC140876|JPH1|56704|junctophilin 1##AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15	0.0	
chr1	243174238	243174336	reg1021403.p1	6.718	+	AK098092 NM_152666	-486290	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	-561517	-	BC132986 BC132988 AF276659 BC127722 NM_001004343	-1011913	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	244069	-	TSC_hg19_v1_chr1_-_243418566 AK310003 BC050722	244285	-	TSC_hg19_v1_chr1_-_243418675 NM_001042404 NM_001042405 NM_014812	244404	-	AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa##AK310003|CEP170|9859|centrosomal protein 170kDa##BC050722|CEP170|9859|centrosomal protein 170kDa##NM_001042404|CEP170|9859|centrosomal protein 170kDa##NM_001042405|CEP170|9859|centrosomal protein 170kDa##NM_014812|CEP170|9859|centrosomal protein 170kDa	0.168637	
chr5	156319277	156319398	reg1019734.p1	6.718	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	-565164	+	BX537948 NM_000337 NM_001128209 NM_172244	-565577	+	NM_001099293 AK302388	-1926051	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	70898	-	BC013325 TSC_hg19_v1_chr5_-_156485247	165846	-	TSC_hg19_v1_chr5_-_156485459 NM_001099414 NM_012206	166128	-	BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC013325|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_001099414|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_012206|HAVCR1|26762|hepatitis A virus cellular receptor 1	0.177707	
chr7	73482430	73482553	reg1000036.p2	6.718	+	BX538199 BC065566 AB208942 BX537939 BC050379 TSC_hg19_v1_chr7_+_73442502 AK094138 AK095990 AK122731 AK225659 AK092232 AX747420 BC035570 AM393341	-39990	+	TSC_hg19_v1_chr7_+_73442469 M36860 X52896	-40022	+	TSC_hg19_v1_chr7_+_73442462 AK125511 AK130894	-40035	+	AK290162 NM_002314 TSC_hg19_v1_chr7_+_73498133	15635	+	TSC_hg19_v1_chr7_+_73498160 D26309	15664	+	TSC_hg19_v1_chr7_+_73498325 AB385563 AF134379	15843	+	BX538199|ELN|2006|elastin##BC065566|ELN|2006|elastin##AB208942|ELN|2006|elastin##BX537939|ELN|2006|elastin##BC050379|ELN|2006|elastin##AK094138|ELN|2006|elastin##AK095990|ELN|2006|elastin##AK122731|ELN|2006|elastin##AK225659|ELN|2006|elastin##AK092232|ELN|2006|elastin##BC035570|ELN|2006|elastin##AM393341|ELN|2006|elastin##M36860|ELN|2006|elastin##X52896|ELN|2006|elastin##AK125511|ELN|2006|elastin##AK130894|ELN|2006|elastin##AK290162|LIMK1|3984|LIM domain kinase 1##NM_002314|LIMK1|3984|LIM domain kinase 1##D26309|LIMK1|3984|LIM domain kinase 1##AF134379|LIMK1|3984|LIM domain kinase 1	0.724604	CTCF.p2:-15:0.479	CTCF.p2:49:0.245
chrX	284475	284656	reg1013236.p2	6.718	+	NM_018390 BC064136 BC005028 BC000888 BC032072	-86458	+	None	None	None	None	None	None	AK293506 NM_013239	63124	-	NM_000451 NM_006883 U89331	300513	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	1047019	-	NM_018390|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC064136|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC005028|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC000888|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC032072|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##AK293506|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_013239|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_000451|SHOX|6473|short stature homeobox##NM_006883|SHOX|6473|short stature homeobox##U89331|SHOX|6473|short stature homeobox##AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2	0.151322	
chr10	94640134	94640290	reg1023506.p1	6.717	+	AK293857 NM_019053 AF220217 TSC_hg19_v1_chr10_+_94608276 AL832501 EF571007 AK315544 BC028395 CU688490 EU832839 GQ129240	-31955	+	NM_001013848	-45743	+	TSC_hg19_v1_chr10_+_94449711 NM_002729 AK309463 AK314891 BC014336 BC015110 L16499 X67235 AB528006 BC050638 EU446478	-190503	+	AY356349 NM_183374	180808	+	AK027560 NM_057157	193019	+	AK075374 NM_000783 AF005418	193444	+	AK293857|EXOC6|54536|exocyst complex component 6##NM_019053|EXOC6|54536|exocyst complex component 6##AF220217|EXOC6|54536|exocyst complex component 6##AL832501|EXOC6|54536|exocyst complex component 6##EF571007|EXOC6|54536|exocyst complex component 6##AK315544|EXOC6|54536|exocyst complex component 6##BC028395|EXOC6|54536|exocyst complex component 6##EU832839|EXOC6|54536|exocyst complex component 6##GQ129240|EXOC6|54536|exocyst complex component 6##NM_001013848|EXOC6|54536|exocyst complex component 6##NM_002729|HHEX|3087|hematopoietically expressed homeobox##AK314891|HHEX|3087|hematopoietically expressed homeobox##BC014336|HHEX|3087|hematopoietically expressed homeobox##BC015110|HHEX|3087|hematopoietically expressed homeobox##L16499|HHEX|3087|hematopoietically expressed homeobox##X67235|HHEX|3087|hematopoietically expressed homeobox##BC050638|HHEX|3087|hematopoietically expressed homeobox##EU446478|HHEX|3087|hematopoietically expressed homeobox##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1	0.887059	CTCF.p2:17:0.887
chr14	52739199	52739316	reg1020647.p1	6.717	+	BC040968 NM_000953 AB464671 EF577397	-4776	+	NM_007361 TSC_hg19_v1_chr14_-_52536023	-203272	-	BC035608 TSC_hg19_v1_chr14_-_52535777 AK291652	-203483	-	TSC_hg19_v1_chr14_+_52781029 NM_000956 U19487 BC093927 BC093929 AY275471 X83868	41878	+	TSC_hg19_v1_chr14_-_53019222 AK097748 BC137081 BC137082 BC144469 AB037765 BC152428 BC150205 BC142650 NM_001160047 NM_020784	279915	-	NM_001099652 AY255590 AK123953 AL834372	280678	+	BC040968|PTGDR|5729|prostaglandin D2 receptor (DP)##NM_000953|PTGDR|5729|prostaglandin D2 receptor (DP)##EF577397|PTGDR|5729|prostaglandin D2 receptor (DP)##NM_007361|NID2|22795|nidogen 2 (osteonidogen)##BC035608|NID2|22795|nidogen 2 (osteonidogen)##AK291652|NID2|22795|nidogen 2 (osteonidogen)##NM_000956|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##U19487|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##BC093927|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##BC093929|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##AY275471|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##X83868|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##AK097748|TXNDC16|57544|thioredoxin domain containing 16##BC137081|TXNDC16|57544|thioredoxin domain containing 16##BC137082|TXNDC16|57544|thioredoxin domain containing 16##BC144469|TXNDC16|57544|thioredoxin domain containing 16##AB037765|TXNDC16|57544|thioredoxin domain containing 16##BC152428|TXNDC16|57544|thioredoxin domain containing 16##BC150205|TXNDC16|57544|thioredoxin domain containing 16##BC142650|TXNDC16|57544|thioredoxin domain containing 16##NM_001160047|TXNDC16|57544|thioredoxin domain containing 16##NM_020784|TXNDC16|57544|thioredoxin domain containing 16##NM_001099652|GPR137C|283554|G protein-coupled receptor 137C##AY255590|GPR137C|283554|G protein-coupled receptor 137C##AK123953|GPR137C|283554|G protein-coupled receptor 137C##AL834372|GPR137C|283554|G protein-coupled receptor 137C	1.051795	CTCF.p2:45:0.970
chr5	106035047	106035146	reg1020532.p1	6.717	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-3136615	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-3440639	+	BC024591 NM_015216 AB463068	-3569822	+	AK308672 NM_001962 U26403	971494	-	TSC_hg19_v1_chr5_-_107717106 AK126722	1682034	-	BC063316 NM_001163315	1682702	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.040771	
chr20	29901278	29901385	reg1021675.p1	6.716	+	DQ012020 NM_001037731	-4944	-	DQ012019 NM_001037730	-55865	+	TSC_hg19_v1_chr20_+_29611882 BC062724 BC062743 AK307061 BC095491 AK057099	-289406	+	BC035677 NM_054112 AF347073 BC117378 HQ258709 AF529415	55105	+	AF479698 AF479699 AY122473 AY501001 AY358860 BC062212 AY122472 NM_153289 NM_153323 NM_173460	77014	-	HQ258031 AY501000 BC130607 BC130609 NM_001011878	92680	-	DQ012020|DEFB116|245930|defensin, beta 116##NM_001037731|DEFB116|245930|defensin, beta 116##DQ012019|DEFB115|245929|defensin, beta 115##NM_001037730|DEFB115|245929|defensin, beta 115##BC062724|FRG1B|284802|FSHD region gene 1 family, member B##BC062743|FRG1B|284802|FSHD region gene 1 family, member B##BC095491|FRG1B|284802|FSHD region gene 1 family, member B##AK057099|LOC642236|642236|FSHD region gene 1 pseudogene##BC035677|DEFB118|117285|defensin, beta 118##NM_054112|DEFB118|117285|defensin, beta 118##AF347073|DEFB118|117285|defensin, beta 118##BC117378|DEFB118|117285|defensin, beta 118##HQ258709|DEFB118|117285|defensin, beta 118##AF529415|DEFB118|117285|defensin, beta 118##AF479698|DEFB119|245932|defensin, beta 119##AF479699|DEFB119|245932|defensin, beta 119##AY122473|DEFB119|245932|defensin, beta 119##AY501001|DEFB119|245932|defensin, beta 119##AY358860|DEFB119|245932|defensin, beta 119##BC062212|DEFB119|245932|defensin, beta 119##AY122472|DEFB119|245932|defensin, beta 119##NM_153289|DEFB119|245932|defensin, beta 119##NM_153323|DEFB119|245932|defensin, beta 119##NM_173460|DEFB119|245932|defensin, beta 119##HQ258031|DEFB121|245934|defensin, beta 121##AY501000|DEFB121|245934|defensin, beta 121##BC130607|DEFB121|245934|defensin, beta 121##BC130609|DEFB121|245934|defensin, beta 121##NM_001011878|DEFB121|245934|defensin, beta 121	0.530422	CTCF.p2:27:0.499
chr3	122111900	122112034	reg1018646.p1	6.716	+	NM_014367 AK026030 BC010896 BC015060 AF201944 AF107495 AF250321 TSC_hg19_v1_chr3_+_122103076 AK293994 AF191020	-8899	+	BC019231 BC109378 TSC_hg19_v1_chr3_-_122102079 BC054051 BC062725 NM_001017928	-9890	-	NM_005213 AK291308 BC010379 X05978 CR456914	-67893	+	BC025762 NM_019069 TSC_hg19_v1_chr3_-_122134925	22950	-	S75295 TSC_hg19_v1_chr3_-_122233757 BC090864	121733	-	TSC_hg19_v1_chr3_-_122233764 BC002374 BC003009 AK312713	121805	-	NM_014367|FAM162A|26355|family with sequence similarity 162, member A##AK026030|FAM162A|26355|family with sequence similarity 162, member A##BC010896|FAM162A|26355|family with sequence similarity 162, member A##BC015060|FAM162A|26355|family with sequence similarity 162, member A##AF201944|FAM162A|26355|family with sequence similarity 162, member A##AF107495|FAM162A|26355|family with sequence similarity 162, member A##AF250321|FAM162A|26355|family with sequence similarity 162, member A##AK293994|FAM162A|26355|family with sequence similarity 162, member A##AF191020|FAM162A|26355|family with sequence similarity 162, member A##BC109378|CCDC58|131076|coiled-coil domain containing 58##BC054051|CCDC58|131076|coiled-coil domain containing 58##BC062725|CCDC58|131076|coiled-coil domain containing 58##NM_001017928|CCDC58|131076|coiled-coil domain containing 58##NM_005213|CSTA|1475|cystatin A (stefin A)##AK291308|CSTA|1475|cystatin A (stefin A)##BC010379|CSTA|1475|cystatin A (stefin A)##X05978|CSTA|1475|cystatin A (stefin A)##CR456914|CSTA|1475|cystatin A (stefin A)##BC025762|WDR5B|54554|WD repeat domain 5B##NM_019069|WDR5B|54554|WD repeat domain 5B##S75295|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC090864|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC002374|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC003009|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##AK312713|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)	0.999097	CTCF.p2:-38:0.999
chr3	42271502	42271616	reg1018247.p2	6.716	+	TSC_hg19_v1_chr3_+_42201684 BX647199 NM_014965 BC015922 AK000754 AM392573 AM393596 CU677507 EU446989	-69804	+	AL713787 TSC_hg19_v1_chr3_+_42190865	-80712	+	TSC_hg19_v1_chr3_+_42190749 AK294221	-80811	+	BC008283 NM_001174138	33879	-	BC111026 NM_000729	36102	-	AF326749 BC016747 NM_144634	180484	-	BX647199|TRAK1|22906|trafficking protein, kinesin binding 1##NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1##BC015922|TRAK1|22906|trafficking protein, kinesin binding 1##AK000754|TRAK1|22906|trafficking protein, kinesin binding 1##AM392573|TRAK1|22906|trafficking protein, kinesin binding 1##AM393596|TRAK1|22906|trafficking protein, kinesin binding 1##EU446989|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##BC008283|CCK|885|cholecystokinin##NM_001174138|CCK|885|cholecystokinin##BC111026|CCK|885|cholecystokinin##NM_000729|CCK|885|cholecystokinin##AF326749|LYZL4|131375|lysozyme-like 4##BC016747|LYZL4|131375|lysozyme-like 4##NM_144634|LYZL4|131375|lysozyme-like 4	0.997479	CTCF.p2:-27:0.997
chr9	86211918	86212045	reg1019442.p1	6.716	+	AK094281 EF560742 TSC_hg19_v1_chr9_-_86153270 AK297722 AK223597 NM_001244959 NM_174938 BC041376	-58776	-	NM_001244960 AY137774	-129322	-	BC037253 NM_001244961	-265106	-	BC142991 BC036421 BC045782 TSC_hg19_v1_chr9_+_86238057 NM_001001551 NM_001190727 AY615889	25999	+	AF176069 AF293384 AB528730 TSC_hg19_v1_chr9_-_86322601	110619	-	TSC_hg19_v1_chr9_-_86322844 BC010066	110866	-	AK094281|FRMD3|257019|FERM domain containing 3##EF560742|FRMD3|257019|FERM domain containing 3##AK297722|FRMD3|257019|FERM domain containing 3##AK223597|FRMD3|257019|FERM domain containing 3##NM_001244959|FRMD3|257019|FERM domain containing 3##NM_174938|FRMD3|257019|FERM domain containing 3##BC041376|FRMD3|257019|FERM domain containing 3##NM_001244960|FRMD3|257019|FERM domain containing 3##AY137774|FRMD3|257019|FERM domain containing 3##BC037253|FRMD3|257019|FERM domain containing 3##NM_001244961|FRMD3|257019|FERM domain containing 3##BC142991|C9orf103|414328|chromosome 9 open reading frame 103##BC036421|C9orf103|414328|chromosome 9 open reading frame 103##BC045782|C9orf103|414328|chromosome 9 open reading frame 103##NM_001001551|C9orf103|414328|chromosome 9 open reading frame 103##NM_001190727|C9orf103|414328|chromosome 9 open reading frame 103##AY615889|C9orf103|414328|chromosome 9 open reading frame 103##AF176069|UBQLN1|29979|ubiquilin 1##AF293384|UBQLN1|29979|ubiquilin 1##BC010066|UBQLN1|29979|ubiquilin 1	0.996334	CTCF.p2:31:0.996
chr12	79801869	79801979	reg1016884.p2	6.715	+	CR627387 NM_001135806 AK308743	-362473	+	TSC_hg19_v1_chr12_+_79258794 BC058917	-543107	+	TSC_hg19_v1_chr12_+_79258597 BC041373	-543332	+	AB590922 CR536549 BC007018 TSC_hg19_v1_chr12_-_80084318	282291	-	U63809 TSC_hg19_v1_chr12_-_80084784 NM_002583	282841	-	AK302692 NM_001143886	505766	-	CR627387|SYT1|6857|synaptotagmin I##NM_001135806|SYT1|6857|synaptotagmin I##AK308743|SYT1|6857|synaptotagmin I##BC058917|SYT1|6857|synaptotagmin I##BC041373|SYT1|6857|synaptotagmin I##CR536549|PAWR|5074|PRKC, apoptosis, WT1, regulator##BC007018|PAWR|5074|PRKC, apoptosis, WT1, regulator##U63809|PAWR|5074|PRKC, apoptosis, WT1, regulator##NM_002583|PAWR|5074|PRKC, apoptosis, WT1, regulator##AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	0.931694	CTCF.p2:-16:0.932
chr20	14122916	14123026	reg1018837.p1	6.715	+	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-146635	+	AK131348 TSC_hg19_v1_chr20_+_13976161 NM_080676	-146865	+	BC035741 AK302170 NM_025229	-151713	-	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	195285	-	BC018687 NM_001033087	1054532	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	2431042	-	BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK131348|MACROD2|140733|MACRO domain containing 2##NM_080676|MACROD2|140733|MACRO domain containing 2##BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B	0.029625	
chr11	72300942	72301058	reg1021010.p1	6.713	+	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	-155350	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	-155424	-	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	-155545	-	TSC_hg19_v1_chr11_-_72353458 AY495089 AK131525 AK092278 AX747449 NM_001143839 NM_001243784	52479	-	AY495087 NM_001146209	79107	-	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	84453	-	AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK131525|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK092278|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001143839|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001243784|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	0.908221	CTCF.p2:-10:0.908
chr14	107287525	107287649	reg1020239.p1	6.713	+	DQ205161 AY392971 AF085654 X58399 X58398 BC002792 TSC_hg19_v1_chr14_-_107259820	-27867	-	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	-68589	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	-76286	-	None	None	None	None	None	None	None	None	None	X58399|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##X58398|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##BC002792|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	2.861007	CTCF.p2:-19:0.867	CTCF.p2:38:0.996	CTCF.p2:-39:0.999
chr11	77531791	77531943	reg1021520.p1	6.712	+	AF380176 AB527448 TSC_hg19_v1_chr11_-_77531769 BC015360 NM_016578 AK098130	-35	-	AB590787 AF026003 BT019907 AF005422 BC119634 BC119635 TSC_hg19_v1_chr11_-_77348840 U53454 AK315259 X91788 NM_001293	-183053	-	BC040443 NM_173039 TSC_hg19_v1_chr11_+_77300718 AB028147	-231167	+	TSC_hg19_v1_chr11_+_77532238 AF092136 AK024688 BC002752 NM_024684	336	+	AL834171 EU446555 TSC_hg19_v1_chr11_-_77705710 CU679559 AK000455 BC018672	173817	-	BC009995 TSC_hg19_v1_chr11_-_77705714 AK290866 BC015664 NM_033547	173848	-	AF380176|RSF1|51773|remodeling and spacing factor 1##BC015360|RSF1|51773|remodeling and spacing factor 1##NM_016578|RSF1|51773|remodeling and spacing factor 1##AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC040443|AQP11|282679|aquaporin 11##NM_173039|AQP11|282679|aquaporin 11##AB028147|AQP11|282679|aquaporin 11##AF092136|C11orf67|28971|chromosome 11 open reading frame 67##AK024688|C11orf67|28971|chromosome 11 open reading frame 67##BC002752|C11orf67|28971|chromosome 11 open reading frame 67##NM_024684|C11orf67|28971|chromosome 11 open reading frame 67##AL834171|INTS4|92105|integrator complex subunit 4##EU446555|INTS4|92105|integrator complex subunit 4##AK000455|INTS4|92105|integrator complex subunit 4##BC018672|INTS4|92105|integrator complex subunit 4##BC009995|INTS4|92105|integrator complex subunit 4##AK290866|INTS4|92105|integrator complex subunit 4##BC015664|INTS4|92105|integrator complex subunit 4##NM_033547|INTS4|92105|integrator complex subunit 4	0.0	
chr1	38506306	38506416	reg1021315.p1	6.712	+	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-27931	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-27976	+	TSC_hg19_v1_chr1_-_38471187 BC014501 BC001351 BC011697 AK309179 AK290641 NM_001243878 NM_004468	-35128	-	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	6088	-	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	819025	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	832655	-	AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC014501|FHL3|2275|four and a half LIM domains 3##BC001351|FHL3|2275|four and a half LIM domains 3##BC011697|FHL3|2275|four and a half LIM domains 3##AK309179|FHL3|2275|four and a half LIM domains 3##AK290641|FHL3|2275|four and a half LIM domains 3##NM_001243878|FHL3|2275|four and a half LIM domains 3##NM_004468|FHL3|2275|four and a half LIM domains 3##L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein	0.913324	CTCF.p2:-7:0.913
chr3	184187304	184187389	reg1020472.p1	6.712	+	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	-89306	+	BC130322 BC136338 BC143982 L33410 NM_000460 NM_001177597 NM_001177598 TSC_hg19_v1_chr3_-_184095936	-91408	-	TSC_hg19_v1_chr3_+_184081196 NM_006232 Z49199 BC000739 AB464044 EU446997	-106117	+	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	92236	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	242417	-	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	342577	+	AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##BC130322|THPO|7066|thrombopoietin##BC136338|THPO|7066|thrombopoietin##BC143982|THPO|7066|thrombopoietin##L33410|THPO|7066|thrombopoietin##NM_000460|THPO|7066|thrombopoietin##NM_001177597|THPO|7066|thrombopoietin##NM_001177598|THPO|7066|thrombopoietin##NM_006232|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##Z49199|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##BC000739|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##EU446997|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3##AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)	0.998433	CTCF.p2:-9:0.998
chr3	45706752	45706859	reg1020594.p2	6.712	+	TSC_hg19_v1_chr3_+_45636176 BC117236 BC117238 NM_014240 AJ132408 HQ258355	-70534	+	TSC_hg19_v1_chr3_+_45635397 M80651	-71220	+	AK308146 BC025989 TSC_hg19_v1_chr3_+_45430067 D21851 NM_015340	-276741	+	CR749564 TSC_hg19_v1_chr3_+_45730767 NM_014016	23928	+	TSC_hg19_v1_chr3_+_45730846 AK291142	24052	+	TSC_hg19_v1_chr3_+_45730887 AB020658 AK301248	24084	+	BC117236|LIMD1|8994|LIM domains containing 1##BC117238|LIMD1|8994|LIM domains containing 1##NM_014240|LIMD1|8994|LIM domains containing 1##AJ132408|LIMD1|8994|LIM domains containing 1##HQ258355|LIMD1|8994|LIM domains containing 1##M80651|LIMD1|8994|LIM domains containing 1##AK308146|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##BC025989|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##D21851|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015340|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##CR749564|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##NM_014016|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK291142|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AB020658|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK301248|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	0.293997	CTCF.p2:2:0.294
chr5	56594861	56595017	reg1013082.p3	6.712	+	NM_001127236 AL136844 AB463051 AM392551 AM393442	-85011	+	BC113004 NM_001127235	-123666	+	TSC_hg19_v1_chr5_+_56469911 AL161991 AY226828	-125042	+	BC137470 BC137473 BX648504 NM_001017992	183655	-	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	1160997	-	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	1192355	+	NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1##AL161991|GPBP1|65056|GC-rich promoter binding protein 1##AY226828|GPBP1|65056|GC-rich promoter binding protein 1##BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane	0.996213	CTCF.p2:-19:0.996
chr21	39877720	39877840	reg1021724.p1	6.711	+	AB489170 AM392572 CU691828 EU446470 AK304662 AK303518 BC040168 AK300395 NM_001136155 NM_182918	-7415	-	NM_170737	-233352	+	D87291 NM_170736 AK292812	-248851	+	M21535 NM_001243429	79065	-	TSC_hg19_v1_chr21_-_40032563 AK309469 NM_001243428	154796	-	AY204740 AY204741 AY204742 AY204743 NM_001243432 TSC_hg19_v1_chr21_-_40033677 AK297807 NM_001136154 NM_004449	155880	-	AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_170737|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##M21535|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243429|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK309469|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243428|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204740|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204741|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204742|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204743|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243432|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK297807|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136154|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_004449|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	0.95425	CTCF.p2:12:0.954
chr10	33444896	33445000	reg1021794.p1	6.710	+	TSC_hg19_v1_chr10_-_33247203 NM_002211	-197711	-	TSC_hg19_v1_chr10_-_33247146 BC020057 AK291697 BX537407	-197809	-	TSC_hg19_v1_chr10_-_33246826 NM_133376	-198114	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	178505	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	178866	-	TSC_hg19_v1_chr10_-_33623996 BX648025	179050	-	NM_002211|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BC020057|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##AK291697|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BX537407|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##NM_133376|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##BX648025|NRP1|8829|neuropilin 1	0.914832	CTCF.p2:-9:0.915
chr19	1445257	1445374	reg1021687.p1	6.710	+	TSC_hg19_v1_chr19_+_1438421 BC064908 BC141832	-6886	+	TSC_hg19_v1_chr19_+_1438400 AB055776 BC080543	-6913	+	TSC_hg19_v1_chr19_+_1438371 NM_001018 BC105810 J02984	-6950	+	TSC_hg19_v1_chr19_+_1446268 AF110334 AL078616	973	+	TSC_hg19_v1_chr19_+_1450119 BC032573 NM_005883	4834	+	TSC_hg19_v1_chr19_+_1450208 BC020381	4935	+	BC064908|RPS15|6209|ribosomal protein S15##BC141832|RPS15|6209|ribosomal protein S15##BC080543|RPS15|6209|ribosomal protein S15##NM_001018|RPS15|6209|ribosomal protein S15##BC105810|RPS15|6209|ribosomal protein S15##J02984|RPS15|6209|ribosomal protein S15##AF110334|APC2|10297|adenomatosis polyposis coli 2##AL078616|APC2|10297|adenomatosis polyposis coli 2##BC032573|APC2|10297|adenomatosis polyposis coli 2##NM_005883|APC2|10297|adenomatosis polyposis coli 2##BC020381|APC2|10297|adenomatosis polyposis coli 2	0.279742	CTCF.p2:27:0.280
chr7	116311907	116312058	reg1021211.p2	6.709	+	NM_001172896 TSC_hg19_v1_chr7_+_116166415 AF172085 NM_001172897 AK307501 EF649773 EF649774 AB209926	-145578	+	TSC_hg19_v1_chr7_+_116165089 Z18951 BC082246 DQ890647 DQ893827 EU176473 AB489179 AM393679 AB451284 AB451416 BT007143	-146880	+	BC009685 TSC_hg19_v1_chr7_+_116165054 BC006432 NM_001172895 AY762103	-146924	+	TSC_hg19_v1_chr7_+_116312490 EU176015 J02958 NM_000245 NM_001127500 X54559 DQ656040 BC130420 AK309532	490	+	AK296974 TSC_hg19_v1_chr7_+_116364175	52193	+	TSC_hg19_v1_chr7_+_116395441 BC127890	83469	+	NM_001172896|CAV1|857|caveolin 1, caveolae protein, 22kDa##AF172085|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172897|CAV1|857|caveolin 1, caveolae protein, 22kDa##AK307501|CAV1|857|caveolin 1, caveolae protein, 22kDa##EF649773|CAV1|857|caveolin 1, caveolae protein, 22kDa##EF649774|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB209926|CAV1|857|caveolin 1, caveolae protein, 22kDa##Z18951|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC082246|CAV1|857|caveolin 1, caveolae protein, 22kDa##DQ890647|CAV1|857|caveolin 1, caveolae protein, 22kDa##DQ893827|CAV1|857|caveolin 1, caveolae protein, 22kDa##EU176473|CAV1|857|caveolin 1, caveolae protein, 22kDa##AM393679|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB451284|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB451416|CAV1|857|caveolin 1, caveolae protein, 22kDa##BT007143|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC009685|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC006432|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172895|CAV1|857|caveolin 1, caveolae protein, 22kDa##AY762103|CAV1|857|caveolin 1, caveolae protein, 22kDa##EU176015|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK296974|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	0.021989	
chrX	50887801	50887902	reg1018796.p1	6.709	+	BC117264 BC117266 NM_005448 BC069155 HQ258214	-234093	+	TSC_hg19_v1_chrX_-_50557118 AB033028 BC151240 NM_020717	-330740	-	TSC_hg19_v1_chrX_-_50386679 AY044234	-501174	-	AF469196 NM_153183	187231	+	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	187852	+	AB528198 AM392606 AK001490 TSC_hg19_v1_chrX_-_51239368	351481	-	BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AB033028|SHROOM4|57477|shroom family member 4##BC151240|SHROOM4|57477|shroom family member 4##NM_020717|SHROOM4|57477|shroom family member 4##AY044234|SHROOM4|57477|shroom family member 4##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AM392606|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK001490|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11	0.974333	CTCF.p2:-14:0.974
chr13	52158000	52158181	reg1019767.p1	6.708	+	TSC_hg19_v1_chr13_+_52034640 D28359	-123450	+	TSC_hg19_v1_chr13_+_52027481 BC030118 BC045725	-130617	+	NM_001039937 NM_001039938 NM_012141 AL833524 TSC_hg19_v1_chr13_-_52027409	-130748	-	NM_052950 TSC_hg19_v1_chr13_+_52158579	447	+	TSC_hg19_v1_chr13_+_52158597 AK311177	504	+	AK309815 TSC_hg19_v1_chr13_+_52158630	543	+	NM_001039937|INTS6|26512|integrator complex subunit 6##NM_001039938|INTS6|26512|integrator complex subunit 6##NM_012141|INTS6|26512|integrator complex subunit 6##AL833524|INTS6|26512|integrator complex subunit 6##NM_052950|WDFY2|115825|WD repeat and FYVE domain containing 2##AK311177|WDFY2|115825|WD repeat and FYVE domain containing 2##AK309815|WDFY2|115825|WD repeat and FYVE domain containing 2	0.0	
chr19	10969052	10969179	reg1022816.p1	6.708	+	BC157863 NM_001136482	-10010	+	AB528501 DQ892640 DQ895878 BC002443 BC018831 TSC_hg19_v1_chr19_-_10946889 U41804 NM_006858	-22191	-	TSC_hg19_v1_chr19_+_10828827 BC039596 AK289831	-140256	+	TSC_hg19_v1_chr19_+_10982255 NM_199141	13135	+	TSC_hg19_v1_chr19_+_10982381 AL833242	13321	+	CU680474 AB463355 AM392632 TSC_hg19_v1_chr19_-_11039312 BC000056 BC013014 NM_024029	70124	-	BC157863|C19orf38|255809|chromosome 19 open reading frame 38##NM_001136482|C19orf38|255809|chromosome 19 open reading frame 38##DQ892640|TMED1|11018|transmembrane emp24 protein transport domain containing 1##DQ895878|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC002443|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC018831|TMED1|11018|transmembrane emp24 protein transport domain containing 1##U41804|TMED1|11018|transmembrane emp24 protein transport domain containing 1##NM_006858|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC039596|DNM2|1785|dynamin 2##AK289831|DNM2|1785|dynamin 2##NM_199141|CARM1|10498|coactivator-associated arginine methyltransferase 1##AL833242|CARM1|10498|coactivator-associated arginine methyltransferase 1##AM392632|YIPF2|78992|Yip1 domain family, member 2##BC000056|YIPF2|78992|Yip1 domain family, member 2##BC013014|YIPF2|78992|Yip1 domain family, member 2##NM_024029|YIPF2|78992|Yip1 domain family, member 2	0.966846	CTCF.p2:3:0.967
chr4	157396587	157396686	reg1015638.p1	6.708	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	-521588	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	-571759	+	AB528059 AJ252011 NM_017419	-609236	-	AB590688 BC051876 BC094746 AF260738 AK300480 AF244813 AK313817 BC041783 BC065490 TSC_hg19_v1_chr4_-_157892334 AM922296 AB033831	495581	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	495842	-	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	495923	-	BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##BC051876|PDGFC|56034|platelet derived growth factor C##BC094746|PDGFC|56034|platelet derived growth factor C##AF260738|PDGFC|56034|platelet derived growth factor C##AK300480|PDGFC|56034|platelet derived growth factor C##AF244813|PDGFC|56034|platelet derived growth factor C##AK313817|PDGFC|56034|platelet derived growth factor C##BC041783|PDGFC|56034|platelet derived growth factor C##AM922296|PDGFC|56034|platelet derived growth factor C##AB033831|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C	0.013203	
chr19	14682935	14683054	reg1019025.p2	6.707	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	-145	-	TSC_hg19_v1_chr19_+_14640435 AK001416 AK315412 BC007801 BC013881 BC005952 AF038958 BC002425 BC034484 AF222742 AX771269 AF038959 AB529027 DQ891949 DQ895135 EU832830 GQ129437	-42535	+	AK094087 TSC_hg19_v1_chr19_+_14640406	-42588	+	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	10920	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	102683	-	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	117770	+	CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AK001416|TECR|9524|trans-2,3-enoyl-CoA reductase##AK315412|TECR|9524|trans-2,3-enoyl-CoA reductase##BC007801|TECR|9524|trans-2,3-enoyl-CoA reductase##BC013881|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005952|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038958|TECR|9524|trans-2,3-enoyl-CoA reductase##BC002425|TECR|9524|trans-2,3-enoyl-CoA reductase##BC034484|TECR|9524|trans-2,3-enoyl-CoA reductase##AF222742|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038959|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ891949|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ895135|TECR|9524|trans-2,3-enoyl-CoA reductase##EU832830|TECR|9524|trans-2,3-enoyl-CoA reductase##GQ129437|TECR|9524|trans-2,3-enoyl-CoA reductase##AK094087|TECR|9524|trans-2,3-enoyl-CoA reductase##NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333	0.031326	
chr20	18885446	18885559	reg1021040.p1	6.707	+	NM_001242671	-74664	-	AF418568 AF418570 AX721297 NM_178483 AK130970 AY248902 BC105121 BC112024	-91104	+	TSC_hg19_v1_chr20_+_18568661 NM_080820 BC045167 AK074304 BC100923 BC100924 BC100925 BC100926 AK291440 AF332356 CU692252	-316852	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	307783	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	307951	+	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	981641	+	NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AF418568|C20orf79|140856|chromosome 20 open reading frame 79##AF418570|C20orf79|140856|chromosome 20 open reading frame 79##NM_178483|C20orf79|140856|chromosome 20 open reading frame 79##AK130970|C20orf79|140856|chromosome 20 open reading frame 79##AY248902|C20orf79|140856|chromosome 20 open reading frame 79##BC105121|C20orf79|140856|chromosome 20 open reading frame 79##BC112024|C20orf79|140856|chromosome 20 open reading frame 79##NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2	0.0	
chr8	35009876	35010001	reg1021921.p1	6.706	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-1552443	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	-1552479	-	TSC_hg19_v1_chr8_-_33457295 BC067804	-1552651	-	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	83049	+	NM_001031836 AK302391 BC028701	1631932	+	TSC_hg19_v1_chr8_-_37457377 AK025743	2447430	-	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC067804|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AK025743|LOC157860|157860|uncharacterized LOC157860	0.096866	
chr1	1978016	1978144	reg1023201.p1	6.705	+	TSC_hg19_v1_chr1_+_1950794 NM_000815 AK290861 BC033801 AB385062 DQ892050 AF016917	-27277	+	AK127388 NM_001080484	-42805	-	AB528804 GQ129259 GQ129260 TSC_hg19_v1_chr1_-_1850719 NM_178545	-127359	-	TSC_hg19_v1_chr1_+_1981920 BC014270 NM_002744 BC008058 AB464093 DQ892929 DQ893922 DQ896178 CU675909 AK290995 BT007082 L14283 Z15108	3914	+	AK294649 NM_001033581	27004	+	NM_001242874 AK294782	27387	+	NM_000815|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##AK290861|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##BC033801|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##DQ892050|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##AF016917|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##AK127388|KIAA1751|85452|KIAA1751##NM_001080484|KIAA1751|85452|KIAA1751##GQ129259|TMEM52|339456|transmembrane protein 52##GQ129260|TMEM52|339456|transmembrane protein 52##NM_178545|TMEM52|339456|transmembrane protein 52##BC014270|PRKCZ|5590|protein kinase C, zeta##NM_002744|PRKCZ|5590|protein kinase C, zeta##BC008058|PRKCZ|5590|protein kinase C, zeta##DQ892929|PRKCZ|5590|protein kinase C, zeta##DQ893922|PRKCZ|5590|protein kinase C, zeta##DQ896178|PRKCZ|5590|protein kinase C, zeta##AK290995|PRKCZ|5590|protein kinase C, zeta##BT007082|PRKCZ|5590|protein kinase C, zeta##L14283|PRKCZ|5590|protein kinase C, zeta##Z15108|PRKCZ|5590|protein kinase C, zeta##AK294649|PRKCZ|5590|protein kinase C, zeta##NM_001033581|PRKCZ|5590|protein kinase C, zeta##NM_001242874|PRKCZ|5590|protein kinase C, zeta##AK294782|PRKCZ|5590|protein kinase C, zeta	1.025951	CTCF.p2:5:0.997
chr13	37555412	37555543	reg1019123.p2	6.705	+	TSC_hg19_v1_chr13_-_37494376 BC067766 NM_001127217 NM_005905	-61088	-	TSC_hg19_v1_chr13_+_37393356 NM_000538 AK313912 BC026088 DQ891169 DQ893581 DQ894352	-162078	+	BC036540 NM_203451 AK294236	-307375	+	CU680348 TSC_hg19_v1_chr13_-_37573465 AF161498 BC012531 AF183413 AK299126	17976	-	TSC_hg19_v1_chr13_-_37573478 AK299085 NM_001142364 NM_013338	18012	-	NM_181503	19200	+	BC067766|SMAD9|4093|SMAD family member 9##NM_001127217|SMAD9|4093|SMAD family member 9##NM_005905|SMAD9|4093|SMAD family member 9##NM_000538|RFXAP|5994|regulatory factor X-associated protein##AK313912|RFXAP|5994|regulatory factor X-associated protein##BC026088|RFXAP|5994|regulatory factor X-associated protein##DQ891169|RFXAP|5994|regulatory factor X-associated protein##DQ893581|RFXAP|5994|regulatory factor X-associated protein##DQ894352|RFXAP|5994|regulatory factor X-associated protein##BC036540|SERTM1|400120|serine-rich and transmembrane domain containing 1##NM_203451|SERTM1|400120|serine-rich and transmembrane domain containing 1##AK294236|SERTM1|400120|serine-rich and transmembrane domain containing 1##AF161498|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##BC012531|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##AF183413|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##AK299126|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##AK299085|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##NM_001142364|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##NM_013338|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##NM_181503|EXOSC8|11340|exosome component 8	0.79064	CTCF.p2:8:0.791
chr1	68936191	68936301	reg1021092.p1	6.705	+	AK289925 BC075035 BC075036 NM_000329 U18991	-20610	-	TSC_hg19_v1_chr1_-_68698207 BC137109 BC137113 BC110826 AB097018 AK074984 AK301613 BX648748 BX538320 NM_001002292 NM_001193334 AK074583 AK309779 DQ323735 AY359035 NM_024911	-238089	-	BC005362 U96750 NM_004675	-419861	-	CU688044 BC065304 BC011743 BC035506 BC041580 TSC_hg19_v1_chr1_-_68962723	26455	-	TSC_hg19_v1_chr1_-_68962766 AK225735 BC003511 AB281187 AB281274 AK000361 AK299324 NM_001114120 NM_017779	26535	-	TSC_hg19_v1_chr1_+_70032819 BC080568	1096592	+	AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC137109|WLS|79971|wntless homolog (Drosophila)##BC137113|WLS|79971|wntless homolog (Drosophila)##BC110826|WLS|79971|wntless homolog (Drosophila)##AB097018|WLS|79971|wntless homolog (Drosophila)##AK074984|WLS|79971|wntless homolog (Drosophila)##AK301613|WLS|79971|wntless homolog (Drosophila)##BX648748|WLS|79971|wntless homolog (Drosophila)##BX538320|WLS|79971|wntless homolog (Drosophila)##NM_001002292|WLS|79971|wntless homolog (Drosophila)##NM_001193334|WLS|79971|wntless homolog (Drosophila)##AK074583|WLS|79971|wntless homolog (Drosophila)##AK309779|WLS|79971|wntless homolog (Drosophila)##DQ323735|WLS|79971|wntless homolog (Drosophila)##AY359035|WLS|79971|wntless homolog (Drosophila)##NM_024911|WLS|79971|wntless homolog (Drosophila)##BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##BC065304|DEPDC1|55635|DEP domain containing 1##BC011743|DEPDC1|55635|DEP domain containing 1##BC035506|DEPDC1|55635|DEP domain containing 1##BC041580|DEPDC1|55635|DEP domain containing 1##AK225735|DEPDC1|55635|DEP domain containing 1##BC003511|DEPDC1|55635|DEP domain containing 1##AB281187|DEPDC1|55635|DEP domain containing 1##AB281274|DEPDC1|55635|DEP domain containing 1##AK000361|DEPDC1|55635|DEP domain containing 1##AK299324|DEPDC1|55635|DEP domain containing 1##NM_001114120|DEPDC1|55635|DEP domain containing 1##NM_017779|DEPDC1|55635|DEP domain containing 1	0.993655	CTCF.p2:-6:0.994
chr14	107042218	107042352	reg1024680.p1	6.704	+	AF267786 AF460742 AF460743 DQ454547 DQ454549 DQ454453 DQ454546 DQ454587 DQ454772 DQ523855 DQ454644 GU552737 DQ454456 DQ454588 DQ454927 EU433863 DQ454420 DQ454430 DQ454879 DQ454417 DQ454704 DQ454916 DQ454924 DQ454969 GU552772 DQ454423 DQ455004 EU099273 GU552771 DQ454935 DQ523903 DQ454770 DQ454843 FJ840010 FJ840025 FJ840144 FJ840161 FJ840267 FJ840276 FJ840292 FJ840293 FJ840346 FJ840350 FJ840358 FJ840360 FJ840363 FJ873816 FJ873820 FJ873848 FJ873865 FJ873868 FJ873928 FJ873940 FJ873954 FJ873964 FJ873985 FJ874015 FJ874045 FJ874091 GQ232837 HM116178 HM116213 HM116223 AJ008166 EU433880 GQ232769 GQ232840 GQ232959 EF175426 FJ694889 EF441751 EF441753 AY998718 U44492 U44503 U44504 U44505 AF017462 AJ008170 AJ008172 AJ008178 AJ008203 AJ487495 AJ230634 AJ230635 AJ230636 AJ230637 AJ230638 AJ230640 AJ230641 AJ230642 AJ230643 AJ230644 AJ230646 AJ230649 AJ230652 AJ230655 AJ230656 AJ230657 M34028 AY577299 S73611 S73613 FJ385326 GQ232913 GQ232958 GU552732 GU552750 AM279543 AF085655 AF085656 EU099270 AM233802 AM233804 EU099059 EU099279 EU099288 GQ232907 AF209895 AF209899 AF211932 AF343357 AF343358 AF343374 AF343390 AF343395 AF343401 AF343405 AF343419 AF343420 U86784 AJ862553 AJ862555 AJ862556 AJ862558 AJ862559 AJ862560 AJ862561 AJ862562 AJ862563 AJ862564 AJ862566 AJ862569 AJ862573 AM233783 AM233785 AM233805 AM233806 AM233807 AM233841 AY062302 HM774009 HM996214 AF103038 EU099234 HM773977 HM774742 AY062301 HM773976 HM774100 HM774513 HM774833 HM775004 HQ704065 HQ704066 HQ704067 HQ704068 AF103039 HM774204 HM774915 JN110745 JN110851 JN111173 JN111174 JN111195 JN111203 JN111206 JN111213 L04327 L04331 FJ385346 FJ385432 HM774001 HM774101 HM774244 HM774256 HM774288 HM774294 HM774334 HM774417 HM774549 HM774581 HM774591 HM774745 HM774776 HM774778 HM774796 HM774808 HM774855 HM774958 HM774983 HQ704004 HQ704052 HM775063 Z46853 AF103177 DQ524149 EU146312 EU146344 EU146346 EU146382 AB067195 AF103056 AY393315 AY393569 AY393571 EU099233 AF306373 AJ580927 AY062322 AY376089 U70236 AY393249 AY393314 AY393316 AY393318 AY393319 AY393320 AY393321 AY393455 AY393456 AY393457 AY393458 AY393459 AY393463 AY393466 AY393471 AY393566 AY393567 AY393568 AY393570 AY393572 AY393573 EU099231 EU099232 M34022 U00574 AF110479 AY062303 DQ926264 DQ926266 DQ926273 AF129750 AM233827 AM233828 AM233830 AM233831 AM233832 AM233833 AM233836 AM233838 AY640515 AB066833 AY941987 DQ168569 HM996472 HQ378399 AF021959 AJ239373 AJ272398 AJ555263 AY685303 DQ100803 DQ490742 DQ523920 DQ523934 DQ523971 DQ524022 DQ524049 DQ524147 DQ524150 DQ524160 DQ926054 GU570396 GU570398 HM995095 HM995420 HM995456 HM995460 HM995529 HM995571 HM995573 HM995577 HM995607 HM995969 HM996171 HM996234 HM996245 HM996273 HM996421 HM996528 HM996547 HQ378338 U77555 X94019 X94043 Z46759 HM995213 AB063835 AB063897 AB063925 AB066826 AB066832 AB066935 AB067154 AB067157 AB067159 AB067175 AB067326 AB067330 AB067334 AB067392 AB245095 AF174110 AF394197 AM279622 AY640502 AY640546 AY941916 AY941923 AY941958 AY971039 AY971068 AY971072 AY971073 AY971085 AY971113 AY971118 AY971121 AY971122 DQ100861 DQ100955 DQ100988 DQ490743 DQ926034 DQ926082 DQ926086 DQ926177 DQ926233 DQ926269 DQ926292 DQ926295 DQ926339 DQ926351 DQ926360 DQ926597 DQ926609 DQ926637 DQ926643 DQ926654 EU794427 EU794430 EU794443 FJ385310 FJ385369 GU570400 GU570406 HQ378329 HQ378361 HQ378384 X61649 AB063926 AB066971 AB066985 AB067015 AB067070 AB067074 AB067100 AB067116 AB067125 AB067129 AB067241 AF062125 AF062157 AF078940 AF078941 AF099197 AF110480 AF110484 AF110486 AF110487 AF174068 AF442760 AJ002767 AJ002771 AJ002772 AJ002773 AJ002774 AJ002775 AJ006165 AJ249378 AJ249636 AJ276099 AJ399826 AJ414007 AJ491906 AJ491907 AJ491913 AJ491914 AJ555254 AY033242 AY033243 AY033250 AY033274 AY033275 AY033276 AY033281 AY033282 AY033286 AY033288 AY640520 AY781870 AY941877 AY941878 AY941879 AY941919 AY941920 AY941921 AY971098 DQ065619 DQ065621 DQ065625 DQ065655 DQ065657 DQ065658 DQ205181 DQ379476 DQ490737 DQ490744 DQ926149 DQ926201 DQ926390 DQ926391 DQ926462 DQ926465 DQ926503 DQ926525 DQ926533 DQ926560 HM152490 HQ378409 L12198 L26537 U22381 U44493 U77538 U77539 U77541 U77544 U77547 U77548 U77549 U77550 U77551 U77552 U77553 U77557 U77558 U77559 U77560 U77561 U77562 U77563 U77564 U77565 U77566 U77567 X87447 X94002 X94004 X94005 X94006 X94028 X94029 X94030 X94031 X94032 X94038 X94039 X94041 X94044 X94045 X94046 X94048 X94050 X94051 X94052 X94053 X94055 X94058 X94059 X94061 X94062 X94063 X94066 X94071 X94072 X94073 X94077 Z46760 Z97037 DQ535275 DQ535319 DQ535340 DQ535347 DQ535361 DQ535401 DQ535430 DQ535447 DQ535450 DQ535454 DQ535458 DQ926623 EF177983 EF177986 EF178042 EF178049 EF178067 EF178105 FJ195497 FJ195499 FJ195517 FJ195521 FJ195527 FJ195537 JN252502 Z26829 Z26830 Z26832 Z26833 Z26839 Z26842 Z26843 Z26844 HM995790 HM995656 HM995886 M27125 U77535 U77543 U77554 U77556 AY393198 AY393202 HM995637 HM995880 AY392957 AY392958 AY392962 AY392964 AY392965 AY392966 AY392968 AY392969 AY392970 AY392976 AY392978 AY392980 AY392984 AY393084 AY393086 AY393087 AY393088 AY393090 AY393092 AY393094 AY393096 AY393097 AY393185 AY393186 AY393187 AY393188 AY393189 AY393191 AY393192 AY393193 AY393194 AY393195 AY393196 AY393197 AY393199 AY393200 AY393201 AY393203 AY393204 AF085657 AF085658 AF085659 AM233808 AF052379 AF062154 AF062214 AF348829 AF348830 AF348831 AF348832 AF348833 AF348834 AJ131060 AM233779 AM233780 AM233803 AM233834 AM233839 AY190828 L03679 X65912 X65913 X65914 X65915 Z47219 Z47225 X58402 BC014258 X58401 X58400 X58397 BC089417 BC078670 TSC_hg19_v1_chr14_-_107035221	-7294	-	TSC_hg19_v1_chr14_-_107013478 AK093806 AK097303 AK125632 AK126320 AK129510 AX748317	-28809	-	DQ187707 GU552700 GU552764 AY003783 EF175429 FJ694883 EU099078 EU099213 AM183990 EU099124 HM774924 HM774242 JN110729 JN110849 AF103239 FJ385422 FJ385433 HM773968 HM773995 HM774338 HM774389 HM774601 HM774867 HM996424 HQ704020 FJ385411 EU146318 JN110975 AF062300 AF062305 DQ524053 HM994912 HM994914 HM994916 HM994920 HM995673 HM995674 HM995675 HM995676 HM995783 HM995910 HM995945 HM996441 HM996522 AF062299 AF471505 DQ187607 DQ322806 DQ840692 DQ840693 DQ840702 DQ840814 AM279609 DQ926615 EF178081 X99992 AB063924 AB066892 AB066969 AB067011 AB067080 AB067263 AF394199 AF455925 AF459632 AF471500 AF471503 AF471504 AJ300805 AJ579185 AY055477 AY055483 AY640482 AY941852 D83692 DQ005278 DQ005282 DQ100801 DQ926649 GU570351 GU570352 GU570354 L12185 L12186 X64240 Y11898 Z96974 HM995768 AJ519245 AJ519224 AJ519230 AJ519233 AJ519246 AJ519249 AJ519251 AJ519253 AJ519255 HM995877 AJ519222 AJ519299 AY393054 AY393058 AY393158 AY393161 AY190818 Z36887 AY623427 X52894 BC090938 TSC_hg19_v1_chr14_-_107013458	-28995	-	AF028099 AF460754 DQ454615 DQ523869 GQ232779 GQ232881 GU552765 FJ873979 FJ873984 FJ874049 FJ874062 FJ874084 DQ454628 AY003743 AY003830 DQ523889 DQ523867 DQ454655 DQ523892 DQ523925 FJ840112 FJ840322 FJ873963 DQ454805 DQ523873 FJ840063 FJ840064 FJ840091 FJ840093 FJ840096 FJ840098 FJ840147 FJ840240 FJ840275 FJ840277 FJ840278 FJ840279 FJ840280 FJ840281 FJ840282 FJ840283 FJ840285 FJ840286 FJ840288 FJ840289 FJ840290 FJ840291 FJ840294 FJ840296 FJ840298 FJ840299 FJ840300 FJ840301 FJ840303 FJ873817 FJ873838 FJ873840 FJ873886 FJ873926 FJ873934 FJ874029 FJ874031 FJ874050 FJ874058 AJ008233 DQ523926 AY003838 AY003851 EF175410 EF091918 EU667609 JF810270 EU099077 EU099148 AF103213 AJ010335 AM183984 DQ097899 HM774214 EF555586 AF062229 FJ385338 FJ385339 FJ385347 GQ504915 GQ504957 HM774086 HM774115 HM774155 HM774774 EU146321 S73143 U85229 AY062306 AF035787 AF035788 DQ100793 DQ100813 AY941912 DQ187711 DQ524134 DQ926275 HM995353 HM995355 HM995441 HM995442 HM995443 HM995444 HM995445 HM995446 HM995470 HM995471 HM995475 HM995476 HM996019 HM996347 DQ187673 DQ322745 DQ322877 DQ322968 DQ322969 DQ322970 DQ322971 DQ322972 U00540 AB373623 AY530312 AY530316 AY686913 AY941884 AY986398 DQ100978 DQ926080 DQ926111 DQ926299 DQ926303 DQ926575 DQ926577 DQ926583 DQ926598 AB066888 AB067000 AB363089 AB363160 AB373617 AB373626 AF006517 AF006525 AF035042 AF174059 AF471510 AF471512 AF471528 AF471529 AF471530 AJ389169 AJ488540 AJ556641 AJ579109 AJ579266 AY640512 AY686909 AY941887 AY941891 AY941915 DQ535286 DQ535377 DQ535410 DQ926146 DQ926152 DQ926467 EF177944 EF177957 EF178005 EF178011 EF178016 EF178078 EF178107 FJ195522 FJ773245 FJ773246 GU570355 HM152495 HM152503 HM152507 HM451460 S76131 U00490 U00498 U00567 X62958 X64243 X77472 X99353 Z33902 Z33904 Z96964 M18520 M18521 HM995907 AY393055 AF062122 AJ548507 AY190822 X81724 X81730 X81735 L08085 BC072419 X61011 AK092785 AX747729 TSC_hg19_v1_chr14_-_107049194	6660	-	AB063741 AY393018 AF062170 AY393124 Z47215 AK126281 TSC_hg19_v1_chr14_-_107066261	23879	-	DQ454429 DQ454922 HM116180 EF091913 EF175413 GQ232868 GQ232976 EF583666 EF407827 EF407822 AJ007320 AF308556 AF103132 HM774392 HQ703981 JN110710 JN111102 HM774550 AY393601 AY393649 AY393679 EU099114 EU099216 DQ100711 AB066834 AF174037 AY050706 DQ005304 FJ492918 HM994925 HQ689790 Z80842 DQ524125 DQ535395 HQ378413 DQ100675 HM996225 AB067078 AY866569 AY971062 DQ065681 DQ926239 EF028212 HM994895 HM994932 HM994933 HM994938 HM994946 HM994963 HM994965 HM995218 HM995258 HM995267 HM995314 HM996512 HM996546 AF021955 GU570262 AF062174 AF062225 AF062279 TSC_hg19_v1_chr14_-_107078867	36440	-	BC014258|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089417|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC078670|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC072419|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126281|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.99554	CTCF.p2:9:0.996
chr17	17889004	17889146	reg1020023.p2	6.704	+	NM_001130090 NM_001130091 NM_001130092 NM_031294 TSC_hg19_v1_chr17_+_17876186 BC047873 AL136926 AK293011 BC040276 BC050419 BC050665 AK093317 AX748051	-12875	+	TSC_hg19_v1_chr17_-_17875715 AK124331 AK295111 AK301944 AK303305 AK299872 AF467441 BC051650 AK294846 NM_001033551 NM_001082968	-13334	-	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	-148751	-	AM393241 CU678578 CU689282 AB528073 AF070584 BC032126 AF052185 AY203943 TSC_hg19_v1_chr17_-_17942481 BC004114 NM_145691 AK290257 AK294487 AK296382	53328	-	TSC_hg19_v1_chr17_+_17942750 BC041829 NM_024052 AK315083 AK074284 AK127580 BC000636	53732	+	TSC_hg19_v1_chr17_+_17991289 AK313362 BC062572 BC000493 NM_001388 AK297569 X80754 AK295575 DQ890768 DQ893929 BT006976	102193	+	NM_001130090|LRRC48|83450|leucine rich repeat containing 48##NM_001130091|LRRC48|83450|leucine rich repeat containing 48##NM_001130092|LRRC48|83450|leucine rich repeat containing 48##NM_031294|LRRC48|83450|leucine rich repeat containing 48##BC047873|LRRC48|83450|leucine rich repeat containing 48##AL136926|LRRC48|83450|leucine rich repeat containing 48##AK293011|LRRC48|83450|leucine rich repeat containing 48##BC040276|LRRC48|83450|leucine rich repeat containing 48##BC050419|LRRC48|83450|leucine rich repeat containing 48##BC050665|LRRC48|83450|leucine rich repeat containing 48##AK093317|LRRC48|83450|leucine rich repeat containing 48##AK124331|TOM1L2|146691|target of myb1-like 2 (chicken)##AK295111|TOM1L2|146691|target of myb1-like 2 (chicken)##AK301944|TOM1L2|146691|target of myb1-like 2 (chicken)##AK303305|TOM1L2|146691|target of myb1-like 2 (chicken)##AK299872|TOM1L2|146691|target of myb1-like 2 (chicken)##AF467441|TOM1L2|146691|target of myb1-like 2 (chicken)##BC051650|TOM1L2|146691|target of myb1-like 2 (chicken)##AK294846|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001033551|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001082968|TOM1L2|146691|target of myb1-like 2 (chicken)##BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1##AM393241|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF070584|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC032126|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF052185|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AY203943|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC004114|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_145691|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK290257|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK294487|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC041829|C17orf39|79018|chromosome 17 open reading frame 39##NM_024052|C17orf39|79018|chromosome 17 open reading frame 39##AK315083|C17orf39|79018|chromosome 17 open reading frame 39##AK074284|C17orf39|79018|chromosome 17 open reading frame 39##AK127580|C17orf39|79018|chromosome 17 open reading frame 39##BC000636|C17orf39|79018|chromosome 17 open reading frame 39##AK313362|DRG2|1819|developmentally regulated GTP binding protein 2##BC062572|DRG2|1819|developmentally regulated GTP binding protein 2##BC000493|DRG2|1819|developmentally regulated GTP binding protein 2##NM_001388|DRG2|1819|developmentally regulated GTP binding protein 2##AK297569|DRG2|1819|developmentally regulated GTP binding protein 2##X80754|DRG2|1819|developmentally regulated GTP binding protein 2##AK295575|DRG2|1819|developmentally regulated GTP binding protein 2##DQ890768|DRG2|1819|developmentally regulated GTP binding protein 2##DQ893929|DRG2|1819|developmentally regulated GTP binding protein 2##BT006976|DRG2|1819|developmentally regulated GTP binding protein 2	0.726561	CTCF.p2:8:0.727
chr4	158138994	158139104	reg1020746.p1	6.704	+	TSC_hg19_v1_chr4_+_157997314 NM_000824 NM_001166061 AF094754 BC032635 AK290617 BC022502 U33267 NM_001166060 AF094755	-141615	+	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	-246490	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	-246571	-	NM_000826 NM_001083619 NM_001083620 BC028736 AL832605 TSC_hg19_v1_chr4_+_158141879 AB209567 BC010574 L20814	2835	+	AK096792 AK129723 TSC_hg19_v1_chr4_+_159091940	952884	+	AL834177 AB527363 AM392540 AM392704 TSC_hg19_v1_chr4_-_159092534	953472	-	NM_000824|GLRB|2743|glycine receptor, beta##NM_001166061|GLRB|2743|glycine receptor, beta##AF094754|GLRB|2743|glycine receptor, beta##BC032635|GLRB|2743|glycine receptor, beta##AK290617|GLRB|2743|glycine receptor, beta##BC022502|GLRB|2743|glycine receptor, beta##U33267|GLRB|2743|glycine receptor, beta##NM_001166060|GLRB|2743|glycine receptor, beta##AF094755|GLRB|2743|glycine receptor, beta##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C##NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AK096792|LOC285505|285505|uncharacterized LOC285505##AK129723|LOC285505|285505|uncharacterized LOC285505##AL834177|FAM198B|51313|family with sequence similarity 198, member B##AM392540|FAM198B|51313|family with sequence similarity 198, member B##AM392704|FAM198B|51313|family with sequence similarity 198, member B	0.99389	CTCF.p2:12:0.994
chr5	112846678	112846792	reg1018205.p2	6.704	+	AK128596 NM_001085377	-22209	-	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	-76103	-	TSC_hg19_v1_chr5_-_112630624 BC009279 BC018919 NM_002387 AK300259	-216126	-	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	2661	+	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	851314	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	851726	+	AK128596|MCC|4163|mutated in colorectal cancers##NM_001085377|MCC|4163|mutated in colorectal cancers##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B##BC009279|MCC|4163|mutated in colorectal cancers##BC018919|MCC|4163|mutated in colorectal cancers##NM_002387|MCC|4163|mutated in colorectal cancers##AK300259|MCC|4163|mutated in colorectal cancers##AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	0.856751	CTCF.p2:1:0.857
chr13	82446800	82446921	reg1023797.p1	6.703	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-1531796	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-1533818	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-2391305	+	TSC_hg19_v1_chr13_-_84456424 BC051738	2009565	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	2009640	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	3926579	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.021538	
chr18	29652437	29652548	reg1020375.p2	6.703	+	TSC_hg19_v1_chr18_+_29598794 BC012021 CU680164	-53686	+	AK000463 AK225518 NM_017831	-54048	+	TSC_hg19_v1_chr18_-_29523092 NM_014939 AL136749	-129384	-	NM_016271 TSC_hg19_v1_chr18_+_29671843	19344	+	TSC_hg19_v1_chr18_+_29671959 AK315761 AF162680 BC018107	19558	+	NM_001191324 NM_198128 TSC_hg19_v1_chr18_+_29672650 AK023579 AB528421 DQ890744 DQ893914 CU676180 BT006878 CR457150	20161	+	BC012021|RNF125|54941|ring finger protein 125##AK000463|RNF125|54941|ring finger protein 125##AK225518|RNF125|54941|ring finger protein 125##NM_017831|RNF125|54941|ring finger protein 125##NM_014939|TRAPPC8|22878|trafficking protein particle complex 8##AL136749|TRAPPC8|22878|trafficking protein particle complex 8##NM_016271|RNF138|51444|ring finger protein 138##AK315761|RNF138|51444|ring finger protein 138##AF162680|RNF138|51444|ring finger protein 138##BC018107|RNF138|51444|ring finger protein 138##NM_001191324|RNF138|51444|ring finger protein 138##NM_198128|RNF138|51444|ring finger protein 138##AK023579|RNF138|51444|ring finger protein 138##DQ890744|RNF138|51444|ring finger protein 138##DQ893914|RNF138|51444|ring finger protein 138##BT006878|RNF138|51444|ring finger protein 138##CR457150|RNF138|51444|ring finger protein 138	0.878841	CTCF.p2:11:0.879
chr14	54833590	54833720	reg1022877.p1	6.702	+	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	-410122	-	NM_130851	-412386	-	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-1213605	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	30066	+	TSC_hg19_v1_chr14_-_54908095 BX248284 AY358635 AK074781 AK307074 AK311897 AF070654 AF104398 NM_005776 BC103741	74461	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	122030	-	BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##NM_130851|BMP4|652|bone morphogenetic protein 4##NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BX248284|CNIH|10175|cornichon homolog (Drosophila)##AY358635|CNIH|10175|cornichon homolog (Drosophila)##AK074781|CNIH|10175|cornichon homolog (Drosophila)##AK307074|CNIH|10175|cornichon homolog (Drosophila)##AK311897|CNIH|10175|cornichon homolog (Drosophila)##AF070654|CNIH|10175|cornichon homolog (Drosophila)##AF104398|CNIH|10175|cornichon homolog (Drosophila)##NM_005776|CNIH|10175|cornichon homolog (Drosophila)##BC103741|CNIH|10175|cornichon homolog (Drosophila)##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta	0.71065	CTCF.p2:-13:0.711
chr14	74005838	74005955	reg1020170.p1	6.702	+	BX161396 AK300886 DQ082754 NM_001037161 BC127747 BC127748 BC143042 BC132889 BC132891 BC144425 GU727640	-1925	+	TSC_hg19_v1_chr14_+_73957687 BC071954	-48204	+	TSC_hg19_v1_chr14_+_73957674 AY390535	-48223	+	AK093515 AX748177 BC047590 NM_001220484 NM_203309	19750	-	AK001939 DQ082755 AK223635 NM_006821 BC006335 TSC_hg19_v1_chr14_+_74035788	29879	+	TSC_hg19_v1_chr14_+_74035979 DQ893488 DQ896406 BC004436 BC006500 L40401 AY005822 CU678722	30101	+	BX161396|ACOT1|641371|acyl-CoA thioesterase 1##AK300886|ACOT1|641371|acyl-CoA thioesterase 1##DQ082754|ACOT1|641371|acyl-CoA thioesterase 1##NM_001037161|ACOT1|641371|acyl-CoA thioesterase 1##BC127747|ACOT1|641371|acyl-CoA thioesterase 1##BC127748|ACOT1|641371|acyl-CoA thioesterase 1##BC143042|ACOT1|641371|acyl-CoA thioesterase 1##BC132889|ACOT1|641371|acyl-CoA thioesterase 1##BC132891|ACOT1|641371|acyl-CoA thioesterase 1##GU727640|ACOT1|641371|acyl-CoA thioesterase 1##BC071954|C14orf169|79697|chromosome 14 open reading frame 169##AY390535|C14orf169|79697|chromosome 14 open reading frame 169##AK093515|HEATR4|399671|HEAT repeat containing 4##BC047590|HEATR4|399671|HEAT repeat containing 4##NM_001220484|HEATR4|399671|HEAT repeat containing 4##NM_203309|HEATR4|399671|HEAT repeat containing 4##AK001939|ACOT2|10965|acyl-CoA thioesterase 2##DQ082755|ACOT2|10965|acyl-CoA thioesterase 2##AK223635|ACOT2|10965|acyl-CoA thioesterase 2##NM_006821|ACOT2|10965|acyl-CoA thioesterase 2##BC006335|ACOT2|10965|acyl-CoA thioesterase 2##DQ893488|ACOT2|10965|acyl-CoA thioesterase 2##DQ896406|ACOT2|10965|acyl-CoA thioesterase 2##BC004436|ACOT2|10965|acyl-CoA thioesterase 2##BC006500|ACOT2|10965|acyl-CoA thioesterase 2##L40401|ACOT2|10965|acyl-CoA thioesterase 2##AY005822|ACOT2|10965|acyl-CoA thioesterase 2	0.984539	CTCF.p2:13:0.985
chr15	44885307	44885414	reg1017121.p1	6.702	+	TSC_hg19_v1_chr15_+_44829374 AK300659	-55978	+	BC002719 U97670 TSC_hg19_v1_chr15_+_44829352 AK002006	-56018	+	TSC_hg19_v1_chr15_+_44829313 AK023388	-56048	+	TSC_hg19_v1_chr15_-_44955849 AB385508 AB470308 AB470309 AB470310 AB058743 BC153879 BC047416	70484	-	TSC_hg19_v1_chr15_-_44955887 BC150640 NM_001160227 NM_025137	70520	-	BC036924 NM_001145112	83725	-	AK300659|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##BC002719|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##U97670|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##AK002006|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##AK023388|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC150640|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_001160227|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_025137|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC036924|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##NM_001145112|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)	0.948098	CTCF.p2:6:0.948
chr6	11618904	11619045	reg1023977.p1	6.702	+	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-80476	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-236434	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-386064	-	NM_001143948 NM_032744	160305	-	NM_002114	393749	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	671619	+	NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr15	90574833	90575014	reg1020804.p2	6.701	+	TSC_hg19_v1_chr15_+_90544707 BC020301 AK094712 NM_198526	-30234	+	AK093274 AX748027 CU691000 TSC_hg19_v1_chr15_-_90456145 AK000495 BC053602 NM_001199058 NM_182616	-118818	-	NM_005829	-137307	-	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	70739	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	70782	-	TSC_hg19_v1_chr15_-_90645713 AK312627	70804	-	BC020301|ZNF710|374655|zinc finger protein 710##AK094712|ZNF710|374655|zinc finger protein 710##NM_198526|ZNF710|374655|zinc finger protein 710##AK093274|C15orf38|348110|chromosome 15 open reading frame 38##AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##BC053602|C15orf38|348110|chromosome 15 open reading frame 38##NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##NM_182616|C15orf38|348110|chromosome 15 open reading frame 38##NM_005829|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial	0.0	
chr16	15644787	15644916	reg1021589.p1	6.701	+	BC023603 NM_001142469	-48729	+	AK057180 NM_033201 TSC_hg19_v1_chr16_+_15528363 AK293431 BC008967	-116451	+	TSC_hg19_v1_chr16_+_15489637 AK096918 AK293380 BC061514	-155201	+	BC137165 BC137170 BC144514 BC144515 TSC_hg19_v1_chr16_-_15737004 AK302667 AK095840 BC064914 NM_001184998 NM_001184999 NM_014647	92142	-	BC033900 NM_001143979	92272	+	NM_017668 BC001421 TSC_hg19_v1_chr16_+_15744101 AK000108 AK025815	99256	+	BC023603|C16orf45|89927|chromosome 16 open reading frame 45##NM_001142469|C16orf45|89927|chromosome 16 open reading frame 45##AK057180|C16orf45|89927|chromosome 16 open reading frame 45##NM_033201|C16orf45|89927|chromosome 16 open reading frame 45##AK293431|C16orf45|89927|chromosome 16 open reading frame 45##BC008967|C16orf45|89927|chromosome 16 open reading frame 45##AK096918|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK293380|MPV17L|255027|MPV17 mitochondrial membrane protein-like##BC061514|MPV17L|255027|MPV17 mitochondrial membrane protein-like##BC137165|KIAA0430|9665|KIAA0430##BC137170|KIAA0430|9665|KIAA0430##BC144514|KIAA0430|9665|KIAA0430##BC144515|KIAA0430|9665|KIAA0430##AK302667|KIAA0430|9665|KIAA0430##AK095840|KIAA0430|9665|KIAA0430##BC064914|KIAA0430|9665|KIAA0430##NM_001184998|KIAA0430|9665|KIAA0430##NM_001184999|KIAA0430|9665|KIAA0430##NM_014647|KIAA0430|9665|KIAA0430##BC033900|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##NM_001143979|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##NM_017668|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC001421|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK000108|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK025815|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)	0.0	
chr3	88162827	88162978	reg1021174.p2	6.701	+	BC052980 TSC_hg19_v1_chr3_-_88108150 AL117392 NM_001008390 NM_003663	-54759	-	NM_000866	-131177	+	AB587506 L18781 X72215 X62429 D10216 NM_000306 NM_001122757	-837229	-	AF543494 NM_018293	25359	+	NM_001195308 BC005222	36122	-	AL832398 NM_173824 TSC_hg19_v1_chr3_+_88199126 BC024188 AK297719 AK313547	36126	+	BC052980|CGGBP1|8545|CGG triplet repeat binding protein 1##AL117392|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_001008390|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_003663|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_000866|HTR1F|3355|5-hydroxytryptamine (serotonin) receptor 1F##L18781|POU1F1|5449|POU class 1 homeobox 1##X72215|POU1F1|5449|POU class 1 homeobox 1##X62429|POU1F1|5449|POU class 1 homeobox 1##D10216|POU1F1|5449|POU class 1 homeobox 1##NM_000306|POU1F1|5449|POU class 1 homeobox 1##NM_001122757|POU1F1|5449|POU class 1 homeobox 1##AF543494|ZNF654|55279|zinc finger protein 654##NM_018293|ZNF654|55279|zinc finger protein 654##NM_001195308|CGGBP1|8545|CGG triplet repeat binding protein 1##BC005222|CGGBP1|8545|CGG triplet repeat binding protein 1##AL832398|C3orf38|285237|chromosome 3 open reading frame 38##NM_173824|C3orf38|285237|chromosome 3 open reading frame 38##BC024188|C3orf38|285237|chromosome 3 open reading frame 38##AK297719|C3orf38|285237|chromosome 3 open reading frame 38##AK313547|C3orf38|285237|chromosome 3 open reading frame 38	0.252234	CTCF.p2:15:0.252
chr7	25431017	25431146	reg1021249.p1	6.701	+	AB040290 AF330057 AF440392 NM_022150	-163001	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-211210	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-266141	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	760852	+	TSC_hg19_v1_chr7_-_26232151 BX538099	801070	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	809260	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.937038	CTCF.p2:-4:0.937
chr8	68251889	68251988	reg1021498.p1	6.701	+	TSC_hg19_v1_chr8_+_67976626 AM156947 BX649147 NM_024790 BC029445 AK096205 AB527449 AK127108	-275302	+	TSC_hg19_v1_chr8_-_67974551 NM_006837 BX648542	-277379	-	TSC_hg19_v1_chr8_-_67974369 BC007272 BC001859 U70734 U65928 AK310434 AK311071 BC001187 AK056967	-277585	-	NM_006421 TSC_hg19_v1_chr8_-_68256017	4027	-	BC030256 TSC_hg19_v1_chr8_+_68256207	4217	+	AF221594 AY044833 BC033684 NM_020361	406660	-	AM156947|CSPP1|79848|centrosome and spindle pole associated protein 1##BX649147|CSPP1|79848|centrosome and spindle pole associated protein 1##NM_024790|CSPP1|79848|centrosome and spindle pole associated protein 1##BC029445|CSPP1|79848|centrosome and spindle pole associated protein 1##AK096205|CSPP1|79848|centrosome and spindle pole associated protein 1##AK127108|CSPP1|79848|centrosome and spindle pole associated protein 1##NM_006837|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##BX648542|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##BC007272|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##BC001859|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##U70734|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##U65928|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##AK310434|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##AK311071|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##BC001187|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##AK056967|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##NM_006421|ARFGEF1|10565|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)##AF221594|CPA6|57094|carboxypeptidase A6##AY044833|CPA6|57094|carboxypeptidase A6##BC033684|CPA6|57094|carboxypeptidase A6##NM_020361|CPA6|57094|carboxypeptidase A6	0.68219	CTCF.p2:22:0.280	CTCF.p2:-92:0.402
chrUn_gl000227	95071	95215	reg1018139.p2	6.701	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.870077	CTCF.p2:12:0.870
chr1	92083170	92083307	reg1022132.p2	6.700	+	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	-116557	+	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	-116819	+	TSC_hg19_v1_chr1_-_91870367 AB058637 AK294754 AK302582 AB058636 AB204867 NM_001017975	-212866	-	AK291345 BC126116 BC136295 BC143869 TSC_hg19_v1_chr1_-_92351559	268279	-	AK225799 TSC_hg19_v1_chr1_-_92351709 NM_001195683 NM_003243	268509	-	L07594 NM_001195684	288320	-	NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB058637|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK294754|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK302582|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB058636|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB204867|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001017975|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK291345|TGFBR3|7049|transforming growth factor, beta receptor III##BC126116|TGFBR3|7049|transforming growth factor, beta receptor III##BC136295|TGFBR3|7049|transforming growth factor, beta receptor III##BC143869|TGFBR3|7049|transforming growth factor, beta receptor III##AK225799|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195683|TGFBR3|7049|transforming growth factor, beta receptor III##NM_003243|TGFBR3|7049|transforming growth factor, beta receptor III##L07594|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195684|TGFBR3|7049|transforming growth factor, beta receptor III	0.68301	CTCF.p2:19:0.612
chr2	231789221	231789364	reg1022611.p1	6.700	+	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-59570	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-59614	+	TSC_hg19_v1_chr2_+_231729653 AK075361 AK090975 AK303199 AX746713	-59647	+	BC032694 NM_005683	648	-	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	71600	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	112945	+	AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##AK075361|ITM2C|81618|integral membrane protein 2C##AK090975|ITM2C|81618|integral membrane protein 2C##AK303199|ITM2C|81618|integral membrane protein 2C##BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72	0.0	
chr6_mcf_hap5	2227569	2227687	reg1020693.p1	6.699	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.669371	CTCF.p2:5:0.669
chr7	44471097	44471171	reg1015861.p1	6.699	+	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	-105843	-	TSC_hg19_v1_chr7_+_44240639 BC007319 AF091079 U95735 DQ890653 DQ893833 CU675611 AB451317 AB451447 BT007078 CR456989 CR542008	-230448	+	TSC_hg19_v1_chr7_+_44240631 AK223488	-230514	+	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	59147	-	AY437865 AY515256 FJ481111 TSC_hg19_v1_chr7_-_44580901 BC117178 BC143731 BC143756 AF192522 AF192523 NM_001101648 NM_013389	109751	-	TSC_hg19_v1_chr7_-_44613508 CR457213 DQ891215 DQ894398 AB385026 AL136700 AK022774 AK309276 BC001235 AK222662 AK315363 AF247666 AJ131712	142397	-	AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC007319|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AF091079|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##U95735|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ890653|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ893833|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451317|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451447|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BT007078|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR456989|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR542008|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK223488|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3##AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##CR457213|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##DQ891215|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##DQ894398|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AL136700|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK022774|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK309276|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##BC001235|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK222662|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK315363|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AF247666|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AJ131712|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56	0.650956	CTCF.p2:-8:0.597
chrUn_gl000222	148773	148924	reg1020588.p1	6.699	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.685867	CTCF.p2:44:0.946	CTCF.p2:-58:0.740
chrX	102118796	102118909	reg1020925.p2	6.699	+	TSC_hg19_v1_chrX_+_102024107 BC040959	-94770	+	NM_001142529 NM_001142530	-117946	+	NM_001142524 NM_001142525 NM_001142526 NM_001142527 NM_001142528 NM_030639 BC041409	-143205	+	BC101169 BC101170 BC101171 BC101172 NM_001031834	73347	+	AF220189 AY833561 TSC_hg19_v1_chrX_-_102319085	200230	-	TSC_hg19_v1_chrX_-_102319100 AF237783 AK290958 NM_018476	200279	-	BC040959|LOC100287765|100287765|uncharacterized LOC100287765##NM_001142529|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142530|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142524|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142525|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142526|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142527|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142528|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_030639|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##BC041409|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like##NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like##AF220189|BEX1|55859|brain expressed, X-linked 1##AY833561|BEX1|55859|brain expressed, X-linked 1##AF237783|BEX1|55859|brain expressed, X-linked 1##AK290958|BEX1|55859|brain expressed, X-linked 1##NM_018476|BEX1|55859|brain expressed, X-linked 1	0.925642	CTCF.p2:-3:0.926
chr11	116512358	116512496	reg1020982.p1	6.698	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-1137247	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-1423779	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1963179	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	131271	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	146288	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	146311	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.770074	CTCF.p2:13:0.770
chr1	196630162	196630280	reg1020477.p2	6.698	+	NM_000186 NM_001014975 TSC_hg19_v1_chr1_+_196621172 AK291395 AK225649 X07523 Y00716 BC037285 BC012610 BC110643 BC073982 BC142699 CU691466	-9094	+	TSC_hg19_v1_chr1_-_196577676 AK131498	-52539	-	EU251076 BC103947 BC103948 BC103949 BC103950 AY359444 NM_198503 BX647852 AK309729 TSC_hg19_v1_chr1_-_196577612	-52696	-	BC029390 NM_001166624 NM_021023 BC070259 AK298459 BC020680 BC020687 BC058009 X68679 CU676644 CU687072 CU691286	113751	+	NM_002113 BC107771 AK311681 AK290830 BC016755 M65292 M65293 X56210 AB590260 DQ892762 DQ896007 X56209	158700	+	AK292752 NM_001201550 NM_001201551 NM_006684 X98337 AJ640130 BC074957	226966	+	NM_000186|CFH|3075|complement factor H##NM_001014975|CFH|3075|complement factor H##AK291395|CFH|3075|complement factor H##AK225649|CFH|3075|complement factor H##X07523|CFH|3075|complement factor H##Y00716|CFH|3075|complement factor H##BC037285|CFH|3075|complement factor H##BC012610|CFH|3075|complement factor H##BC110643|CFH|3075|complement factor H##BC073982|CFH|3075|complement factor H##BC142699|CFH|3075|complement factor H##AK131498|KCNT2|343450|potassium channel, subfamily T, member 2##EU251076|KCNT2|343450|potassium channel, subfamily T, member 2##BC103947|KCNT2|343450|potassium channel, subfamily T, member 2##BC103948|KCNT2|343450|potassium channel, subfamily T, member 2##BC103949|KCNT2|343450|potassium channel, subfamily T, member 2##BC103950|KCNT2|343450|potassium channel, subfamily T, member 2##AY359444|KCNT2|343450|potassium channel, subfamily T, member 2##NM_198503|KCNT2|343450|potassium channel, subfamily T, member 2##BX647852|KCNT2|343450|potassium channel, subfamily T, member 2##AK309729|KCNT2|343450|potassium channel, subfamily T, member 2##NM_001166624|CFHR3|10878|complement factor H-related 3##NM_021023|CFHR3|10878|complement factor H-related 3##BC070259|CFHR3|10878|complement factor H-related 3##AK298459|CFHR3|10878|complement factor H-related 3##BC020680|CFHR3|10878|complement factor H-related 3##BC020687|CFHR3|10878|complement factor H-related 3##BC058009|CFHR3|10878|complement factor H-related 3##X68679|CFHR3|10878|complement factor H-related 3##NM_002113|CFHR1|3078|complement factor H-related 1##BC107771|CFHR1|3078|complement factor H-related 1##AK290830|CFHR1|3078|complement factor H-related 1##BC016755|CFHR1|3078|complement factor H-related 1##M65292|CFHR1|3078|complement factor H-related 1##M65293|CFHR1|3078|complement factor H-related 1##X56210|CFHR1|3078|complement factor H-related 1##DQ892762|CFHR1|3078|complement factor H-related 1##DQ896007|CFHR1|3078|complement factor H-related 1##X56209|CFHR1|3078|complement factor H-related 1##AK292752|CFHR4|10877|complement factor H-related 4##NM_001201550|CFHR4|10877|complement factor H-related 4##NM_001201551|CFHR4|10877|complement factor H-related 4##NM_006684|CFHR4|10877|complement factor H-related 4##X98337|CFHR4|10877|complement factor H-related 4##AJ640130|CFHR4|10877|complement factor H-related 4##BC074957|CFHR4|10877|complement factor H-related 4	0.948131	CTCF.p2:29:0.948
chr14	69568133	69568266	reg1019796.p2	6.698	+	TSC_hg19_v1_chr14_-_69446038 NM_001102 NM_001130004 NM_001130005	-122136	-	TSC_hg19_v1_chr14_-_69446010 BC003576	-122190	-	TSC_hg19_v1_chr14_-_69445990 BC004984	-122207	-	TSC_hg19_v1_chr14_-_69619315 AL831932	51143	-	TSC_hg19_v1_chr14_-_69619740 AB463347 CU692762 BC022967 BX648006 AB058727	51476	-	TSC_hg19_v1_chr14_-_69619843 BC136632	51645	-	NM_001102|ACTN1|87|actinin, alpha 1##NM_001130004|ACTN1|87|actinin, alpha 1##NM_001130005|ACTN1|87|actinin, alpha 1##BC003576|ACTN1|87|actinin, alpha 1##BC004984|ACTN1|87|actinin, alpha 1##AL831932|DCAF5|8816|DDB1 and CUL4 associated factor 5##BC022967|DCAF5|8816|DDB1 and CUL4 associated factor 5##BX648006|DCAF5|8816|DDB1 and CUL4 associated factor 5##AB058727|DCAF5|8816|DDB1 and CUL4 associated factor 5##BC136632|DCAF5|8816|DDB1 and CUL4 associated factor 5	0.953646	CTCF.p2:-7:0.954
chr16	81924109	81924228	reg1017353.p2	6.698	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-111238	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-111266	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	-111271	+	BC019670 AK315652 AK026740 NM_145168	120900	-	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	144693	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	144764	+	BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.958448	CTCF.p2:-18:0.958
chr18	29557364	29557472	reg1022032.p1	6.698	+	TSC_hg19_v1_chr18_-_29523092 NM_014939 AL136749	-34310	-	TSC_hg19_v1_chr18_-_29523064 BC059380 AK292537	-34351	-	BC127109 BC127110 TSC_hg19_v1_chr18_-_29523061	-34394	-	AK000463 AK225518 NM_017831	41026	+	TSC_hg19_v1_chr18_+_29598794 BC012021 CU680164	41388	+	NM_016271 TSC_hg19_v1_chr18_+_29671843	114418	+	NM_014939|TRAPPC8|22878|trafficking protein particle complex 8##AL136749|TRAPPC8|22878|trafficking protein particle complex 8##BC059380|TRAPPC8|22878|trafficking protein particle complex 8##AK292537|TRAPPC8|22878|trafficking protein particle complex 8##BC127109|TRAPPC8|22878|trafficking protein particle complex 8##BC127110|TRAPPC8|22878|trafficking protein particle complex 8##AK000463|RNF125|54941|ring finger protein 125##AK225518|RNF125|54941|ring finger protein 125##NM_017831|RNF125|54941|ring finger protein 125##BC012021|RNF125|54941|ring finger protein 125##NM_016271|RNF138|51444|ring finger protein 138	0.96619	CTCF.p2:15:0.966
chr5	74199365	74199494	reg1020591.p2	6.698	+	AB020695 NM_015566 AK290004	-36791	-	BC039003 TSC_hg19_v1_chr5_+_74161735	-37703	+	BC005288 AK313784 AF372458 AF077615 NM_014886 AJ012409	-136342	+	AF132035 NM_016591	127294	-	AK097510 NM_001164443	333273	-	NM_000859 NM_001130996 TSC_hg19_v1_chr5_+_74633004	433575	+	AB020695|FAM169A|26049|family with sequence similarity 169, member A##NM_015566|FAM169A|26049|family with sequence similarity 169, member A##AK290004|FAM169A|26049|family with sequence similarity 169, member A##BC039003|LOC441086|441086|uncharacterized LOC441086##BC005288|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AK313784|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF372458|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF077615|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##NM_014886|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AJ012409|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF132035|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##NM_016591|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##AK097510|ANKRD31|256006|ankyrin repeat domain 31##NM_001164443|ANKRD31|256006|ankyrin repeat domain 31##NM_000859|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##NM_001130996|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase	0.069089	
chrX	40781752	40781882	reg1021922.p1	6.698	+	TSC_hg19_v1_chrX_-_40595139 AK308871	-186688	-	TSC_hg19_v1_chrX_-_40594999 AK293070	-186837	-	TSC_hg19_v1_chrX_-_40594795 AB006651 AF304448 BC098377 NM_004229	-187029	-	TSC_hg19_v1_chrX_+_40944880 NM_001039590 NM_001039591	163055	+	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	410833	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	411640	+	AK308871|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14##AB006651|MED14|9282|mediator complex subunit 14##AF304448|MED14|9282|mediator complex subunit 14##BC098377|MED14|9282|mediator complex subunit 14##NM_004229|MED14|9282|mediator complex subunit 14##NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked##NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	0.0	
chr11	60851368	60851549	reg1020958.p1	6.697	+	NM_006725 TSC_hg19_v1_chr11_+_60739236 AK128419 AK312749 BC078669 BC033755 X60992 AK292704 DQ786329 DQ786330 U66142 U66145 U66146	-112233	+	BC037974 BC025710 AF135600 AB020598 NM_016582	-132272	-	TSC_hg19_v1_chr11_+_60691945 NM_017870 NM_178031 AK000546 BC114569 BC032059	-159523	+	NM_014207 AY541703 TSC_hg19_v1_chr11_+_60869960 AK292698 X04391 BC027901 DQ892077 DQ895270	18521	+	BC141827 BC142702 AK097326 TSC_hg19_v1_chr11_-_60928910 NM_017966 AL834261 AK302384	77472	-	NM_001079807 AK301286 AK301293 AK301305 AK312941 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	119550	+	NM_006725|CD6|923|CD6 molecule##AK128419|CD6|923|CD6 molecule##AK312749|CD6|923|CD6 molecule##BC078669|CD6|923|CD6 molecule##BC033755|CD6|923|CD6 molecule##X60992|CD6|923|CD6 molecule##AK292704|CD6|923|CD6 molecule##DQ786329|CD6|923|CD6 molecule##DQ786330|CD6|923|CD6 molecule##U66142|CD6|923|CD6 molecule##U66145|CD6|923|CD6 molecule##U66146|CD6|923|CD6 molecule##BC037974|SLC15A3|51296|solute carrier family 15, member 3##BC025710|SLC15A3|51296|solute carrier family 15, member 3##AF135600|SLC15A3|51296|solute carrier family 15, member 3##AB020598|SLC15A3|51296|solute carrier family 15, member 3##NM_016582|SLC15A3|51296|solute carrier family 15, member 3##NM_017870|TMEM132A|54972|transmembrane protein 132A##NM_178031|TMEM132A|54972|transmembrane protein 132A##AK000546|TMEM132A|54972|transmembrane protein 132A##BC114569|TMEM132A|54972|transmembrane protein 132A##BC032059|TMEM132A|54972|transmembrane protein 132A##NM_014207|CD5|921|CD5 molecule##AY541703|CD5|921|CD5 molecule##AK292698|CD5|921|CD5 molecule##X04391|CD5|921|CD5 molecule##BC027901|CD5|921|CD5 molecule##DQ892077|CD5|921|CD5 molecule##DQ895270|CD5|921|CD5 molecule##BC141827|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##BC142702|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK097326|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_017966|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AL834261|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK302384|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_001079807|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301286|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301293|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)	0.067735	
chr2	87775972	87776098	reg1024132.p1	6.697	+	TSC_hg19_v1_chr2_+_87755060 AK312010	-20975	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	-21018	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	-472703	-	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	271584	+	AK302429 NM_001078170	349250	-	CR749330 NM_001024457	509273	-	AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1##AK302429|RGPD2|729857|RANBP2-like and GRIP domain containing 2##NM_001078170|RGPD2|729857|RANBP2-like and GRIP domain containing 2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1	0.475811	CTCF.p2:-11:0.476
chr3	83572753	83572872	reg1022264.p1	6.697	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-1537510	+	TSC_hg19_v1_chr3_-_81810971 NM_000158	-1761870	-	TSC_hg19_v1_chr3_-_81810866 AB209731 BC012098	-1761964	-	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	1435317	+	AF538973 NM_153184	2202819	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	3467439	-	NM_000158|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB209731|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##BC012098|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)	0.0	
chrX	135110673	135110806	reg1022089.p2	6.697	+	TSC_hg19_v1_chrX_+_135067781 AK296444	-42888	+	TSC_hg19_v1_chrX_+_135067651 BC047375 CU690600 AB074255 AK289775 BC049169 D87743 AB385303	-43056	+	TSC_hg19_v1_chrX_+_135067627 NM_001177651 NM_001042537 NM_006359 AK300475 AK316255 AK314562 AF030409 BC035029	-43137	+	TSC_hg19_v1_chrX_+_135229691 NM_001159702 NM_001159703 NM_001449 BC010998 AK297124 AK091702 AK300966 AX747139 AK094024	118894	+	NM_001159700 AK304680	120033	+	AK122708 NM_001159704	140715	+	AK296444|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##BC047375|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##AB074255|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##AK289775|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##BC049169|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##D87743|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##NM_001177651|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##NM_001042537|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##NM_006359|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##AK300475|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##AK316255|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##AK314562|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##AF030409|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##BC035029|SLC9A6|10479|solute carrier family 9 (sodium/hydrogen exchanger), member 6##NM_001159702|FHL1|2273|four and a half LIM domains 1##NM_001159703|FHL1|2273|four and a half LIM domains 1##NM_001449|FHL1|2273|four and a half LIM domains 1##BC010998|FHL1|2273|four and a half LIM domains 1##AK297124|FHL1|2273|four and a half LIM domains 1##AK091702|FHL1|2273|four and a half LIM domains 1##AK300966|FHL1|2273|four and a half LIM domains 1##AK094024|FHL1|2273|four and a half LIM domains 1##NM_001159700|FHL1|2273|four and a half LIM domains 1##AK304680|FHL1|2273|four and a half LIM domains 1##AK122708|FHL1|2273|four and a half LIM domains 1##NM_001159704|FHL1|2273|four and a half LIM domains 1	0.930008	CTCF.p2:-6:0.930
chrX	69674358	69674468	reg1018717.p1	6.697	+	TSC_hg19_v1_chrX_+_69672415 AK304020 AK316518	-2007	+	TSC_hg19_v1_chrX_+_69672143 AB033058 NM_020730	-2238	+	AB209328 NM_021120 AK315041 U49089	-9652	+	TSC_hg19_v1_chrX_+_69674948 AK303377 NM_001166278	521	+	AK057523 AK292471 BC036016 NM_001003811 NM_031276	454150	-	AF320612 BC033816 AX721169 BC021242 AK074865 AK075014 NM_001048164 NM_032803	476536	-	AK304020|DLG3|1741|discs, large homolog 3 (Drosophila)##AK316518|DLG3|1741|discs, large homolog 3 (Drosophila)##AB033058|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_020730|DLG3|1741|discs, large homolog 3 (Drosophila)##AB209328|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_021120|DLG3|1741|discs, large homolog 3 (Drosophila)##AK315041|DLG3|1741|discs, large homolog 3 (Drosophila)##U49089|DLG3|1741|discs, large homolog 3 (Drosophila)##AK303377|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_001166278|DLG3|1741|discs, large homolog 3 (Drosophila)##AK057523|TEX11|56159|testis expressed 11##AK292471|TEX11|56159|testis expressed 11##BC036016|TEX11|56159|testis expressed 11##NM_001003811|TEX11|56159|testis expressed 11##NM_031276|TEX11|56159|testis expressed 11##AF320612|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##BC033816|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK074865|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK075014|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_001048164|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_032803|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3	0.781705	CTCF.p2:-8:0.782
chr6	33313114	33313242	reg1025090.p1	6.696	+	BC109073 BC109074 TSC_hg19_v1_chr6_-_33290737 AK309612 AB015051 AF050179 BC073776 AF039136 AK303767 AK313034 AK303854 AK223404 AK292187 NM_001141969 NM_001141970 NM_001350	-22443	-	AK315747 NM_001145338	-27460	-	BC018541 NM_005453 TSC_hg19_v1_chr6_-_33285522	-27663	-	NM_002263	46134	+	TSC_hg19_v1_chr6_+_33359599 AJ010479	46409	+	BC000712 TSC_hg19_v1_chr6_+_33359612 BC073878	46433	+	BC109073|DAXX|1616|death-domain associated protein##BC109074|DAXX|1616|death-domain associated protein##AK309612|DAXX|1616|death-domain associated protein##AF050179|DAXX|1616|death-domain associated protein##BC073776|DAXX|1616|death-domain associated protein##AF039136|DAXX|1616|death-domain associated protein##AK303767|DAXX|1616|death-domain associated protein##AK313034|DAXX|1616|death-domain associated protein##AK303854|DAXX|1616|death-domain associated protein##AK223404|DAXX|1616|death-domain associated protein##AK292187|DAXX|1616|death-domain associated protein##NM_001141969|DAXX|1616|death-domain associated protein##NM_001141970|DAXX|1616|death-domain associated protein##NM_001350|DAXX|1616|death-domain associated protein##AK315747|ZBTB22|9278|zinc finger and BTB domain containing 22##NM_001145338|ZBTB22|9278|zinc finger and BTB domain containing 22##BC018541|ZBTB22|9278|zinc finger and BTB domain containing 22##NM_005453|ZBTB22|9278|zinc finger and BTB domain containing 22##NM_002263|KIFC1|3833|kinesin family member C1##AJ010479|KIFC1|3833|kinesin family member C1##BC000712|KIFC1|3833|kinesin family member C1##BC073878|KIFC1|3833|kinesin family member C1	0.028597	
chr10	133956088	133956199	reg1018245.p1	6.695	+	NM_001105521	-37831	+	TSC_hg19_v1_chr10_-_133795461 BC067818	-160674	-	CU692440 AB528671 U15174 BC009342 BC080643 TSC_hg19_v1_chr10_-_133795428 AK222626 AK295136 BC021989 AF002697 NM_004052	-160767	-	TSC_hg19_v1_chr10_+_134000451 AB006713 NM_006426 BC142974 BC029280 Y10976 BC136329 BC136330	44296	+	TSC_hg19_v1_chr10_-_134121455 AY098866 NM_173575	165306	-	AK302102 TSC_hg19_v1_chr10_-_134145327	189185	-	NM_001105521|JAKMIP3|282973|Janus kinase and microtubule interacting protein 3##BC067818|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##U15174|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC009342|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC080643|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK222626|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK295136|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC021989|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AF002697|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_004052|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AB006713|DPYSL4|10570|dihydropyrimidinase-like 4##NM_006426|DPYSL4|10570|dihydropyrimidinase-like 4##BC142974|DPYSL4|10570|dihydropyrimidinase-like 4##BC029280|DPYSL4|10570|dihydropyrimidinase-like 4##Y10976|DPYSL4|10570|dihydropyrimidinase-like 4##BC136329|DPYSL4|10570|dihydropyrimidinase-like 4##BC136330|DPYSL4|10570|dihydropyrimidinase-like 4##AY098866|STK32C|282974|serine/threonine kinase 32C##NM_173575|STK32C|282974|serine/threonine kinase 32C##AK302102|STK32C|282974|serine/threonine kinase 32C	0.951687	CTCF.p2:-20:0.952
chr15	89200724	89200840	reg1022216.p1	6.695	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	-18596	+	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	-36212	+	BC109060 BC109061 BC073867 AK054603 BC064591 AB073887 NM_001144074 NM_017996	-110931	-	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	145904	+	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	238016	-	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	255778	-	BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein	0.998087	CTCF.p2:0:0.998
chr19	2951113	2951264	reg1018549.p2	6.695	+	TSC_hg19_v1_chr19_-_2944927 AK290979 BC043354 BC062561 NM_021217	-6245	-	EF534355 NM_173480 TSC_hg19_v1_chr19_+_2900954 BX537601 BC028974 AK314848	-50253	+	AK021699 AK225297 NM_024967 BC009374	-83846	+	TSC_hg19_v1_chr19_+_2977532 NM_001143986 NM_024760 AK024071 BC013986 BC020206 BC007329 BC068052	26378	+	CU675966 AK308608 M99436 AK312285 BC017364 AK303102 NM_003260 TSC_hg19_v1_chr19_-_3029294	77911	-	AK293407 NM_001144762	78423	-	AK290979|ZNF77|58492|zinc finger protein 77##BC043354|ZNF77|58492|zinc finger protein 77##BC062561|ZNF77|58492|zinc finger protein 77##NM_021217|ZNF77|58492|zinc finger protein 77##EF534355|ZNF57|126295|zinc finger protein 57##NM_173480|ZNF57|126295|zinc finger protein 57##BX537601|ZNF57|126295|zinc finger protein 57##BC028974|ZNF57|126295|zinc finger protein 57##AK314848|ZNF57|126295|zinc finger protein 57##AK021699|ZNF556|80032|zinc finger protein 556##AK225297|ZNF556|80032|zinc finger protein 556##NM_024967|ZNF556|80032|zinc finger protein 556##BC009374|ZNF556|80032|zinc finger protein 556##NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##AK308608|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##M99436|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##AK312285|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##BC017364|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##AK303102|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##NM_003260|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##AK293407|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##NM_001144762|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)	0.772612	CTCF.p2:2:0.773
chr1	20042233	20042336	reg1020487.p1	6.694	+	L41147 NM_000871	-50505	+	AK309257 NM_001204086	-70025	+	AK313265 NM_001204085	-70419	+	TSC_hg19_v1_chr1_-_20126374 BX640987 NM_181719	84126	-	CR457228 BC051880 BC030960 AK000232 AK222991 NM_019062	99397	-	TSC_hg19_v1_chr1_+_20208887 NM_015207	166580	+	L41147|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##NM_000871|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4##NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4##CR457228|RNF186|54546|ring finger protein 186##BC051880|RNF186|54546|ring finger protein 186##BC030960|RNF186|54546|ring finger protein 186##AK000232|RNF186|54546|ring finger protein 186##AK222991|RNF186|54546|ring finger protein 186##NM_019062|RNF186|54546|ring finger protein 186##NM_015207|OTUD3|23252|OTU domain containing 3	0.993934	CTCF.p2:-6:0.994
chr13	39625397	39625544	reg1023845.p1	6.694	+	TSC_hg19_v1_chr13_+_39612534 AL833329 NM_001012754 NM_001017370 BX648122 BC052492 BC140877 BC140878 CR749318 AK300260 AK299198 BX647872	-12935	+	TSC_hg19_v1_chr13_-_39612251 NM_025138 NM_170719	-13217	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	-13269	-	AF098807 BC017824 TSC_hg19_v1_chr13_-_40177268	551774	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	551857	-	NM_005780 TSC_hg19_v1_chr13_-_40177356	551892	-	AL833329|NHLRC3|387921|NHL repeat containing 3##NM_001012754|NHLRC3|387921|NHL repeat containing 3##NM_001017370|NHLRC3|387921|NHL repeat containing 3##BX648122|NHLRC3|387921|NHL repeat containing 3##BC052492|NHLRC3|387921|NHL repeat containing 3##BC140877|NHLRC3|387921|NHL repeat containing 3##BC140878|NHLRC3|387921|NHL repeat containing 3##CR749318|NHLRC3|387921|NHL repeat containing 3##AK300260|NHLRC3|387921|NHL repeat containing 3##AK299198|NHLRC3|387921|NHL repeat containing 3##BX647872|NHLRC3|387921|NHL repeat containing 3##NM_025138|PROSER1|80209|proline and serine rich 1##NM_170719|PROSER1|80209|proline and serine rich 1##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1##AF098807|LHFP|10186|lipoma HMGIC fusion partner##BC017824|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##NM_005780|LHFP|10186|lipoma HMGIC fusion partner	0.156792	
chr2	36198387	36198498	reg1020527.p1	6.694	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-2374097	-	AB020653 NM_015376	-2459501	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-2496746	+	TSC_hg19_v1_chr2_+_36582920 AY358371	384520	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	384960	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	626840	-	BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	0.029653	
chr4	55307139	55307255	reg1020650.p2	6.694	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-211733	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-211917	+	AB028838 EU596451 NM_133267	-340975	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	216937	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	684557	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	905219	+	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB028838|GSX2|170825|GS homeobox 2##EU596451|GSX2|170825|GS homeobox 2##NM_133267|GSX2|170825|GS homeobox 2##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3	0.257667	CTCF.p2:14:0.258
chr7	95319752	95319870	reg1013351.p1	6.694	+	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	-93948	-	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-204518	+	TSC_hg19_v1_chr7_-_95064341 AB102891 CU692318 AB591009 L48513 BC040010 AF001602 AF001601 BC073739 AK296029 BC093006 BC046160 AK291103 AK308065 AK315209 AK296636 BC009728 NM_000305 NM_001018161 AK301313	-255450	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	82097	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	631591	-	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	813016	-	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##AB102891|PON2|5445|paraoxonase 2##L48513|PON2|5445|paraoxonase 2##BC040010|PON2|5445|paraoxonase 2##AF001602|PON2|5445|paraoxonase 2##AF001601|PON2|5445|paraoxonase 2##AK296029|PON2|5445|paraoxonase 2##BC093006|PON2|5445|paraoxonase 2##BC046160|PON2|5445|paraoxonase 2##AK291103|PON2|5445|paraoxonase 2##AK308065|PON2|5445|paraoxonase 2##AK315209|PON2|5445|paraoxonase 2##AK296636|PON2|5445|paraoxonase 2##BC009728|PON2|5445|paraoxonase 2##NM_000305|PON2|5445|paraoxonase 2##NM_001018161|PON2|5445|paraoxonase 2##AK301313|PON2|5445|paraoxonase 2##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280	0.474236	CTCF.p2:0:0.474
chr9	129946624	129946798	reg1019030.p2	6.694	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-61681	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-61749	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-61803	-	NM_032293 AK293732 AK095679	80096	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	212735	+	TSC_hg19_v1_chr9_-_130186602 AK124330	239855	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.0	
chr20	8771257	8771356	reg1020553.p1	6.693	+	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	-658276	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-770834	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-770899	-	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	278377	+	AK307482 TSC_hg19_v1_chr20_+_9049806	278492	+	NM_182797 BC117458 BC143868	426752	+	AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4	0.309181	
chr4	122017908	122018046	reg1022836.p1	6.693	+	BC019351 AK289615 NM_024574 TSC_hg19_v1_chr4_-_121993690	-24347	-	TSC_hg19_v1_chr4_-_121843992 AB464059 BC121037 BC121038 AK314293 AK310958 AF272897 AK056352 NM_018699 BC066942	-173982	-	EU831987 EU832080 AB528692 AF394735 TSC_hg19_v1_chr4_-_120987954 U65410 BC070283 AJ000186 BC005945 BC000356 U31278 AK223433 AK313827 AK298228 NM_002358	-1030023	-	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	67507	-	AK301058 NM_001128843	119804	-	AK303192 NM_001244764	130643	-	BC019351|NDNF|79625|neuron-derived neurotrophic factor##AK289615|NDNF|79625|neuron-derived neurotrophic factor##NM_024574|NDNF|79625|neuron-derived neurotrophic factor##BC121037|PRDM5|11107|PR domain containing 5##BC121038|PRDM5|11107|PR domain containing 5##AK314293|PRDM5|11107|PR domain containing 5##AK310958|PRDM5|11107|PR domain containing 5##AF272897|PRDM5|11107|PR domain containing 5##AK056352|PRDM5|11107|PR domain containing 5##NM_018699|PRDM5|11107|PR domain containing 5##BC066942|PRDM5|11107|PR domain containing 5##EU831987|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##EU832080|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF394735|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC070283|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AJ000186|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC005945|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC000356|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK223433|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK313827|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK298228|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##NM_002358|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3##AK301058|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3##AK303192|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3	0.995736	CTCF.p2:23:0.996
chr4	138782946	138783078	reg1021591.p1	6.693	+	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-329370	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-329420	-	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-3660094	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	380352	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	1153981	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	1222391	-	AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.961381	CTCF.p2:20:0.961
chr4	9167879	9167984	reg1021068.p2	6.693	+	NM_001040071	-216455	+	AB593128 M99587 NM_018942	-294434	-	U83411 TSC_hg19_v1_chr4_+_8594521	-573408	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	49198	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	77672	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	91917	+	NM_001040071|LOC650293|650293|seven transmembrane helix receptor##M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	1.573724	CTCF.p2:-3:0.581	CTCF.p2:-41:0.993
chr9	111230772	111230872	reg1019824.p1	6.693	+	TSC_hg19_v1_chr9_-_110252048 NM_004235	-978776	-	AF105036 AF022184 TSC_hg19_v1_chr9_-_110251847 U70663	-978982	-	HM026463 CU688792 CU689020 DQ891793 DQ894975 AB385001 TSC_hg19_v1_chr9_-_110251402 BC030811 BC029923 AK313489	-979374	-	CU689742 TSC_hg19_v1_chr9_-_111618267 BC033789 AK313871 NM_006686	387419	-	BC014610 AK314981 NM_006687	393751	+	BC033094 TSC_hg19_v1_chr9_-_111696232 CR749385 AK304742	465419	-	NM_004235|KLF4|9314|Kruppel-like factor 4 (gut)##AF105036|KLF4|9314|Kruppel-like factor 4 (gut)##AF022184|KLF4|9314|Kruppel-like factor 4 (gut)##U70663|KLF4|9314|Kruppel-like factor 4 (gut)##HM026463|KLF4|9314|Kruppel-like factor 4 (gut)##DQ891793|KLF4|9314|Kruppel-like factor 4 (gut)##DQ894975|KLF4|9314|Kruppel-like factor 4 (gut)##BC030811|KLF4|9314|Kruppel-like factor 4 (gut)##BC029923|KLF4|9314|Kruppel-like factor 4 (gut)##AK313489|KLF4|9314|Kruppel-like factor 4 (gut)##BC033789|ACTL7B|10880|actin-like 7B##AK313871|ACTL7B|10880|actin-like 7B##NM_006686|ACTL7B|10880|actin-like 7B##BC014610|ACTL7A|10881|actin-like 7A##AK314981|ACTL7A|10881|actin-like 7A##NM_006687|ACTL7A|10881|actin-like 7A##BC033094|IKBKAP|8518|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein##CR749385|IKBKAP|8518|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein##AK304742|IKBKAP|8518|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase complex-associated protein	0.996997	CTCF.p2:-10:0.997
chr6	122354870	122354976	reg1020422.p1	6.692	+	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	-598098	+	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	-699280	-	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-2684002	-	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	365772	+	TSC_hg19_v1_chr6_+_122720796 AK225593 AK225594 BC112323 M65217 AK294624 BC005329 BC064622 BC121050 BC121051 BC128420 AK316377 AB463722 CU675115 EU446897	365893	+	CU688532 CU689596 AL137261 TSC_hg19_v1_chr6_-_122792947 AF164794 AB033079 BC014412 BC028607 BC033029 NM_020755 AK075339 AY358429 AK128781 AF087902	438030	-	NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2##AK225593|HSF2|3298|heat shock transcription factor 2##AK225594|HSF2|3298|heat shock transcription factor 2##BC112323|HSF2|3298|heat shock transcription factor 2##M65217|HSF2|3298|heat shock transcription factor 2##AK294624|HSF2|3298|heat shock transcription factor 2##BC005329|HSF2|3298|heat shock transcription factor 2##BC064622|HSF2|3298|heat shock transcription factor 2##BC121050|HSF2|3298|heat shock transcription factor 2##BC121051|HSF2|3298|heat shock transcription factor 2##BC128420|HSF2|3298|heat shock transcription factor 2##AK316377|HSF2|3298|heat shock transcription factor 2##EU446897|HSF2|3298|heat shock transcription factor 2##AL137261|SERINC1|57515|serine incorporator 1##AF164794|SERINC1|57515|serine incorporator 1##AB033079|SERINC1|57515|serine incorporator 1##BC014412|SERINC1|57515|serine incorporator 1##BC028607|SERINC1|57515|serine incorporator 1##BC033029|SERINC1|57515|serine incorporator 1##NM_020755|SERINC1|57515|serine incorporator 1##AK075339|SERINC1|57515|serine incorporator 1##AY358429|SERINC1|57515|serine incorporator 1##AF087902|SERINC1|57515|serine incorporator 1	0.984753	CTCF.p2:9:0.985
chr6	56457825	56457945	reg1017785.p2	6.692	+	BC038763 TSC_hg19_v1_chr6_-_56407722	-50177	-	AF330693 TSC_hg19_v1_chr6_-_56258945	-198961	-	TSC_hg19_v1_chr6_-_56112350 BC045597 AF414088 AL136624 AK313398 NM_030820	-345524	-	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	49754	-	TSC_hg19_v1_chr6_-_56708446 U31850	250587	-	AK294830 TSC_hg19_v1_chr6_-_56716493	258567	-	AF330693|COL21A1|81578|collagen, type XXI, alpha 1##BC045597|COL21A1|81578|collagen, type XXI, alpha 1##AF414088|COL21A1|81578|collagen, type XXI, alpha 1##AL136624|COL21A1|81578|collagen, type XXI, alpha 1##AK313398|COL21A1|81578|collagen, type XXI, alpha 1##NM_030820|COL21A1|81578|collagen, type XXI, alpha 1##AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin##U31850|DST|667|dystonin##AK294830|DST|667|dystonin	0.990304	CTCF.p2:8:0.990
chr10	114067745	114067865	reg1020478.p1	6.691	+	BC113497 BC113499 AF312827 HQ258194 NM_058222	-24353	+	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	-124300	-	AB046780 TSC_hg19_v1_chr10_-_113933602	-134244	-	AK000339 TSC_hg19_v1_chr10_+_114133781	65973	+	TSC_hg19_v1_chr10_+_114133873 NM_203379	66098	+	TSC_hg19_v1_chr10_+_114135025 NM_203380	67217	+	BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AK000339|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##NM_203379|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##NM_203380|ACSL5|51703|acyl-CoA synthetase long-chain family member 5	0.977861	CTCF.p2:5:0.959
chr11	61984778	61984884	reg1021564.p1	6.691	+	AF071219 NM_002407 BC062218 AJ224173	-8680	+	BC062693 AJ224171 BC069170 BC069289 NM_006552	-27133	+	TSC_hg19_v1_chr11_+_61891482 AK307633 BC098576 NM_001040694 NM_020238 AK056195 AK310714 BC032678	-93359	+	NM_006551 BC069290 BC104840 BC104838	24909	+	BC067220 NM_002411 U33147 BC128252 BC128402 AY217100	52827	+	HQ258026 AY236538 BC130639 BC130645 AY359052 NM_206998	81678	-	AF071219|SCGB2A1|4246|secretoglobin, family 2A, member 1##NM_002407|SCGB2A1|4246|secretoglobin, family 2A, member 1##BC062218|SCGB2A1|4246|secretoglobin, family 2A, member 1##AJ224173|SCGB2A1|4246|secretoglobin, family 2A, member 1##BC062693|SCGB1D1|10648|secretoglobin, family 1D, member 1##AJ224171|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069170|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069289|SCGB1D1|10648|secretoglobin, family 1D, member 1##NM_006552|SCGB1D1|10648|secretoglobin, family 1D, member 1##AK307633|INCENP|3619|inner centromere protein antigens 135/155kDa##BC098576|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_001040694|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_020238|INCENP|3619|inner centromere protein antigens 135/155kDa##AK056195|INCENP|3619|inner centromere protein antigens 135/155kDa##AK310714|INCENP|3619|inner centromere protein antigens 135/155kDa##BC032678|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_006551|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC069290|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104840|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104838|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC067220|SCGB2A2|4250|secretoglobin, family 2A, member 2##NM_002411|SCGB2A2|4250|secretoglobin, family 2A, member 2##U33147|SCGB2A2|4250|secretoglobin, family 2A, member 2##BC128252|SCGB2A2|4250|secretoglobin, family 2A, member 2##BC128402|SCGB2A2|4250|secretoglobin, family 2A, member 2##AY217100|SCGB2A2|4250|secretoglobin, family 2A, member 2##HQ258026|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY236538|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130639|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130645|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY359052|SCGB1D4|404552|secretoglobin, family 1D, member 4##NM_206998|SCGB1D4|404552|secretoglobin, family 1D, member 4	0.55398	CTCF.p2:-13:0.441
chr2	62639094	62639275	reg1003535.p1	6.690	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-215918	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-506355	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-523398	-	BC047439 AK091902 AX747245 NM_198276	94355	-	AK292545 NM_001142615	261801	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	293782	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr9	126959765	126959945	reg1017357.p1	6.690	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-185784	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-185972	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-267544	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	60155	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	60390	+	TSC_hg19_v1_chr9_+_127020255 AB026289	60409	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr10	79475004	79475109	reg1019233.p1	6.689	+	BC009695 AK098326 TSC_hg19_v1_chr10_-_79397567 BC062659 BC024965 NM_001014797 NM_001161352 NM_001161353 NM_002247	-77493	-	U13913 BC137115 BC137137 BC144496 CR627384 TSC_hg19_v1_chr10_-_79397499	-77570	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	-77650	-	TSC_hg19_v1_chr10_-_79628871 BC117695	153853	-	AB384502 NM_004747 AB011155 BC146794 TSC_hg19_v1_chr10_-_79686514	211346	-	AF021351 AY091459 AB384941 TSC_hg19_v1_chr10_-_79789272 BC041089 AK300329	314165	-	BC009695|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC062659|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC024965|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001014797|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161352|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161353|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_002247|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)##NM_004747|DLG5|9231|discs, large homolog 5 (Drosophila)##AB011155|DLG5|9231|discs, large homolog 5 (Drosophila)##BC146794|DLG5|9231|discs, large homolog 5 (Drosophila)##AF021351|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AY091459|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC041089|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AK300329|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa	0.891548	CTCF.p2:-15:0.848
chr12	96795093	96795271	reg1021940.p3	6.689	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-865	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	-1199	-	TSC_hg19_v1_chr12_+_96588254 BC017371	-206915	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	505849	+	BC027605 NM_001135175	506061	+	TSC_hg19_v1_chr12_-_98897622 AK126817	2102445	-	AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK126817|LOC643770|643770|uncharacterized LOC643770	0.01498	
chr16	53979953	53980092	reg1021575.p1	6.689	+	TSC_hg19_v1_chr16_+_53738067 AK096554 AB051539 AK295196	-241954	+	NM_001080432	-242148	+	TSC_hg19_v1_chr16_-_53737760 BC136433 AK096333 AK308390 BC017977 CR749645 AK307929 EF565106 NM_001127897 NM_015272 AK304790	-242265	-	BC034328 TSC_hg19_v1_chr16_-_54319025	338942	-	TSC_hg19_v1_chr16_+_54319531 AK309303	339499	+	DQ892008 EU176666 TSC_hg19_v1_chr16_-_54320043	339984	-	AK096554|FTO|79068|fat mass and obesity associated##AB051539|FTO|79068|fat mass and obesity associated##AK295196|FTO|79068|fat mass and obesity associated##NM_001080432|FTO|79068|fat mass and obesity associated##BC136433|RPGRIP1L|23322|RPGRIP1-like##AK096333|RPGRIP1L|23322|RPGRIP1-like##AK308390|RPGRIP1L|23322|RPGRIP1-like##BC017977|RPGRIP1L|23322|RPGRIP1-like##CR749645|RPGRIP1L|23322|RPGRIP1-like##AK307929|RPGRIP1L|23322|RPGRIP1-like##EF565106|RPGRIP1L|23322|RPGRIP1-like##NM_001127897|RPGRIP1L|23322|RPGRIP1-like##NM_015272|RPGRIP1L|23322|RPGRIP1-like##AK304790|RPGRIP1L|23322|RPGRIP1-like##BC034328|IRX3|79191|iroquois homeobox 3##DQ892008|IRX3|79191|iroquois homeobox 3##EU176666|IRX3|79191|iroquois homeobox 3	0.504893	CTCF.p2:4:0.505
chr18	48311225	48311349	reg1021195.p1	6.689	+	TSC_hg19_v1_chr18_+_48086463 BC050299 NM_002747 AK293818 BC040493 AK295058	-224790	+	TSC_hg19_v1_chr18_+_47901415 NM_001039535 NM_145060 BC015706 AK313968 AK303464	-409890	+	BX647189 NM_001101654 NM_014593	-496596	-	AB042647 AK054702 AK295666 NM_001127175 NM_001127176 NM_031939	35078	-	BC029860 NM_001127174	40455	-	TSC_hg19_v1_chr18_+_48405434 NM_001168335 NM_002396	94147	+	BC050299|MAPK4|5596|mitogen-activated protein kinase 4##NM_002747|MAPK4|5596|mitogen-activated protein kinase 4##AK293818|MAPK4|5596|mitogen-activated protein kinase 4##BC040493|MAPK4|5596|mitogen-activated protein kinase 4##AK295058|MAPK4|5596|mitogen-activated protein kinase 4##NM_001039535|SKA1|220134|spindle and kinetochore associated complex subunit 1##NM_145060|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC015706|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK313968|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK303464|SKA1|220134|spindle and kinetochore associated complex subunit 1##BX647189|CXXC1|30827|CXXC finger protein 1##NM_001101654|CXXC1|30827|CXXC finger protein 1##NM_014593|CXXC1|30827|CXXC finger protein 1##AB042647|MRO|83876|maestro##AK054702|MRO|83876|maestro##AK295666|MRO|83876|maestro##NM_001127175|MRO|83876|maestro##NM_001127176|MRO|83876|maestro##NM_031939|MRO|83876|maestro##BC029860|MRO|83876|maestro##NM_001127174|MRO|83876|maestro##NM_001168335|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##NM_002396|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial	0.839697	CTCF.p2:26:0.840
chr1	90598703	90598809	reg1018270.p1	6.689	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	-138040	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-311192	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-311298	+	BC126439 BC126441 AY338397 NM_020063	584029	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	888282	-	TSC_hg19_v1_chr1_-_91487583 BC041138 AK291520	888807	-	NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644##BC041138|ZNF644|84146|zinc finger protein 644##AK291520|ZNF644|84146|zinc finger protein 644	0.116888	
chr6	38971000	38971112	reg1020418.p1	6.689	+	AF527621 NM_001206927	-287940	+	TSC_hg19_v1_chr6_-_38670922 NM_006708	-300119	-	AK312662 TSC_hg19_v1_chr6_-_38670921	-300136	-	BC112126 BC113493 NM_002062 TSC_hg19_v1_chr6_+_39016556 U01104 L23503 AB463688 U01156 U01157	45530	+	AF086405 TSC_hg19_v1_chr6_-_39072506	101403	-	TSC_hg19_v1_chr6_-_39082938 CR627244 AK001963 NM_018322 EU832483 EU832563 BC022007	111790	-	AF527621|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_001206927|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_006708|GLO1|2739|glyoxalase I##AK312662|GLO1|2739|glyoxalase I##BC112126|GLP1R|2740|glucagon-like peptide 1 receptor##BC113493|GLP1R|2740|glucagon-like peptide 1 receptor##NM_002062|GLP1R|2740|glucagon-like peptide 1 receptor##U01104|GLP1R|2740|glucagon-like peptide 1 receptor##L23503|GLP1R|2740|glucagon-like peptide 1 receptor##U01156|GLP1R|2740|glucagon-like peptide 1 receptor##U01157|GLP1R|2740|glucagon-like peptide 1 receptor##AF086405|C6orf64|55776|chromosome 6 open reading frame 64##CR627244|C6orf64|55776|chromosome 6 open reading frame 64##AK001963|C6orf64|55776|chromosome 6 open reading frame 64##NM_018322|C6orf64|55776|chromosome 6 open reading frame 64##EU832483|C6orf64|55776|chromosome 6 open reading frame 64##EU832563|C6orf64|55776|chromosome 6 open reading frame 64##BC022007|C6orf64|55776|chromosome 6 open reading frame 64	0.04277	
chr2	202921495	202921597	reg1019426.p1	6.688	+	AB017365 NM_003507 AB010881 BC015915 CU677505	-22207	+	AB053308 AX772791 NM_139158 AK131512 BX647394 BC038807 EU831752 EU831828	-250254	+	NM_001135745 NM_020919	-275652	-	X99586 TSC_hg19_v1_chr2_-_203103288 U38784 U67122 BC053528 AK311840 BC005899 AB062294 BC066306 BC006462 U83117 U61397 NM_001005781 NM_001005782 NM_003352	181722	-	TSC_hg19_v1_chr2_+_203130458 AK300844 AK307396 AL117554 BC001707	208910	+	TSC_hg19_v1_chr2_+_203130493 BC018805 BC009306 BC032592 NM_015934 DQ890868 EU176490 AB528451 CU689436 AF123534 AF263608	209026	+	AB017365|FZD7|8324|frizzled family receptor 7##NM_003507|FZD7|8324|frizzled family receptor 7##AB010881|FZD7|8324|frizzled family receptor 7##BC015915|FZD7|8324|frizzled family receptor 7##AB053308|CDK15|65061|cyclin-dependent kinase 15##AX772791|CDK15|65061|cyclin-dependent kinase 15##NM_139158|CDK15|65061|cyclin-dependent kinase 15##AK131512|CDK15|65061|cyclin-dependent kinase 15##BX647394|CDK15|65061|cyclin-dependent kinase 15##BC038807|CDK15|65061|cyclin-dependent kinase 15##EU831752|CDK15|65061|cyclin-dependent kinase 15##EU831828|CDK15|65061|cyclin-dependent kinase 15##NM_001135745|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##NM_020919|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##X99586|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U38784|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U67122|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC053528|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK311840|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC005899|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AB062294|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC066306|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC006462|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U83117|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U61397|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005781|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005782|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_003352|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK300844|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK307396|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AL117554|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC001707|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC018805|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC009306|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC032592|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##NM_015934|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##DQ890868|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##EU176490|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AF123534|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AF263608|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)	0.88983	CTCF.p2:-11:0.879
chr8	103136078	103136184	reg1022844.p3	6.688	+	NM_032041	-332693	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-332931	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-332948	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	392	-	NM_001040630	1003	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	115042	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.244249	CTCF.p2:-12:0.244
chr11	4208217	4208377	reg1005017.p1	6.687	+	TSC_hg19_v1_chr11_+_4116085 AK297988 BC006498 CU675435 DQ893028 DQ896272	-92138	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	-92231	+	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	-92308	+	BC140928 NM_001005161	181318	-	TSC_hg19_v1_chr11_-_4414904 BC010861 M62800 AK225564 NM_003141	206609	-	BC137247 BC137248 NM_001005172	262227	+	AK297988|RRM1|6240|ribonucleotide reductase M1##BC006498|RRM1|6240|ribonucleotide reductase M1##DQ893028|RRM1|6240|ribonucleotide reductase M1##DQ896272|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##BC140928|OR52B4|143496|olfactory receptor, family 52, subfamily B, member 4##NM_001005161|OR52B4|143496|olfactory receptor, family 52, subfamily B, member 4##BC010861|TRIM21|6737|tripartite motif containing 21##M62800|TRIM21|6737|tripartite motif containing 21##AK225564|TRIM21|6737|tripartite motif containing 21##NM_003141|TRIM21|6737|tripartite motif containing 21##BC137247|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##BC137248|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##NM_001005172|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2	0.034107	
chr15	64946073	64946196	reg1018727.p1	6.687	+	AB056456 TSC_hg19_v1_chr15_+_64885153	-60981	+	NM_015042	-154516	+	TSC_hg19_v1_chr15_+_64752786 BC142647	-193275	+	BC119629 BC119630 BC148316 BC127630 TSC_hg19_v1_chr15_-_64995360 BC127631 AF242520 AF242521	49226	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	49268	-	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	49335	-	NM_015042|ZNF609|23060|zinc finger protein 609##BC142647|ZNF609|23060|zinc finger protein 609##BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2##BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2	0.838675	CTCF.p2:48:0.839
chr17	41957865	41957985	reg1021798.p2	6.687	+	AK298112 AK309938 NM_001168322 NM_001168323 NM_001168324 NM_145273 AF427619 AF427620 BC025395 AY358364 CU692992	-33376	+	TSC_hg19_v1_chr17_-_41910537 AK309045 AK299535 AK313045 AK311368 BC035833 BC025743 BC047017 NM_001932	-47299	-	BC056865 TSC_hg19_v1_chr17_-_41910234	-47714	-	TSC_hg19_v1_chr17_-_41977993 AK299321 CR936598	20055	-	AL136554 X82895 TSC_hg19_v1_chr17_-_41984895 AK299518 AK223560 AK294564 AK299286	26970	-	BC030287 CR936730 NM_005374 AK311166	27194	-	AK298112|CD300LG|146894|CD300 molecule-like family member g##AK309938|CD300LG|146894|CD300 molecule-like family member g##NM_001168322|CD300LG|146894|CD300 molecule-like family member g##NM_001168323|CD300LG|146894|CD300 molecule-like family member g##NM_001168324|CD300LG|146894|CD300 molecule-like family member g##NM_145273|CD300LG|146894|CD300 molecule-like family member g##AF427619|CD300LG|146894|CD300 molecule-like family member g##AF427620|CD300LG|146894|CD300 molecule-like family member g##BC025395|CD300LG|146894|CD300 molecule-like family member g##AY358364|CD300LG|146894|CD300 molecule-like family member g##AK309045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##AK299535|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##AK313045|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##AK311368|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC035833|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC025743|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC047017|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##NM_001932|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##BC056865|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)##AK299321|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##CR936598|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AL136554|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299518|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK223560|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK294564|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299286|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##BC030287|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##CR936730|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##NM_005374|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK311166|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)	0.0	
chr8	142106719	142106856	reg1016923.p2	6.687	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-95531	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-461163	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-585224	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	31950	+	AK128212 NM_001080431	131885	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	157403	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.990897	CTCF.p2:34:0.991
chr9	130300227	130300334	reg1021406.p1	6.687	+	BC009239 NM_001005374	-85747	+	NM_001005373 NM_001190723 TSC_hg19_v1_chr9_+_130213788 AK056203 NM_138361 AK226106 AY358830	-86496	+	BC059950 BC094831 BC050644 BC071921 L06505 AF037643 AB209471 AK026526 AK057602 BC105603 D28443 NM_000976	-86600	-	AB210016 BC067366 TSC_hg19_v1_chr9_-_130331266	30925	-	TSC_hg19_v1_chr9_-_130331353 BC110345 NM_022833 AF192911	31115	-	TSC_hg19_v1_chr9_-_130341311 AF151783 NM_001035534	41008	-	BC009239|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001005374|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001005373|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001190723|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AK056203|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_138361|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AK226106|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AY358830|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##BC059950|RPL12|6136|ribosomal protein L12##BC094831|RPL12|6136|ribosomal protein L12##BC050644|RPL12|6136|ribosomal protein L12##L06505|RPL12|6136|ribosomal protein L12##AB209471|RPL12|6136|ribosomal protein L12##AK026526|RPL12|6136|ribosomal protein L12##AK057602|RPL12|6136|ribosomal protein L12##BC105603|RPL12|6136|ribosomal protein L12##D28443|RPL12|6136|ribosomal protein L12##NM_000976|RPL12|6136|ribosomal protein L12##AB210016|FAM129B|64855|family with sequence similarity 129, member B##BC067366|FAM129B|64855|family with sequence similarity 129, member B##BC110345|FAM129B|64855|family with sequence similarity 129, member B##NM_022833|FAM129B|64855|family with sequence similarity 129, member B##AF192911|FAM129B|64855|family with sequence similarity 129, member B##AF151783|FAM129B|64855|family with sequence similarity 129, member B##NM_001035534|FAM129B|64855|family with sequence similarity 129, member B	0.439662	CTCF.p2:2:0.415
chr10	118145822	118145968	reg1023739.p1	6.686	+	BC044830 NM_198515	-61956	+	AF038421 NM_005264 TSC_hg19_v1_chr10_-_118033147	-112827	-	AK292886 NM_001145453	-113139	-	AL833418 BC117224 NM_001011709 HQ258260	41557	+	NM_000936 AK313941 J05125 BC007025 BC014309 CU676961 M93285	159620	+	BC005233 CR749596 CR749299 CR749524 M93283 NM_006229 AK307063 AK130236 BC025784 CU675059	204660	+	BC044830|C10orf96|374355|chromosome 10 open reading frame 96##NM_198515|C10orf96|374355|chromosome 10 open reading frame 96##AF038421|GFRA1|2674|GDNF family receptor alpha 1##NM_005264|GFRA1|2674|GDNF family receptor alpha 1##AK292886|GFRA1|2674|GDNF family receptor alpha 1##NM_001145453|GFRA1|2674|GDNF family receptor alpha 1##AL833418|PNLIPRP3|119548|pancreatic lipase-related protein 3##BC117224|PNLIPRP3|119548|pancreatic lipase-related protein 3##NM_001011709|PNLIPRP3|119548|pancreatic lipase-related protein 3##HQ258260|PNLIPRP3|119548|pancreatic lipase-related protein 3##NM_000936|PNLIP|5406|pancreatic lipase##AK313941|PNLIP|5406|pancreatic lipase##J05125|PNLIP|5406|pancreatic lipase##BC007025|PNLIP|5406|pancreatic lipase##BC014309|PNLIP|5406|pancreatic lipase##M93285|PNLIP|5406|pancreatic lipase##BC005233|PNLIPRP1|5407|pancreatic lipase-related protein 1##CR749596|PNLIPRP1|5407|pancreatic lipase-related protein 1##CR749299|PNLIPRP1|5407|pancreatic lipase-related protein 1##CR749524|PNLIPRP1|5407|pancreatic lipase-related protein 1##M93283|PNLIPRP1|5407|pancreatic lipase-related protein 1##NM_006229|PNLIPRP1|5407|pancreatic lipase-related protein 1##AK307063|PNLIPRP1|5407|pancreatic lipase-related protein 1##AK130236|PNLIPRP1|5407|pancreatic lipase-related protein 1##BC025784|PNLIPRP1|5407|pancreatic lipase-related protein 1	0.993732	CTCF.p2:20:0.994
chr15	68831502	68831631	reg1021236.p1	6.686	+	TSC_hg19_v1_chr15_-_68724505 AF109681 AF137378 NM_001004439 AK292445 AK304778 AK095863	-107068	-	TSC_hg19_v1_chr15_+_68570434 AK290167	-261142	+	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	-261473	+	TSC_hg19_v1_chr15_+_68871402 NM_006091	39777	+	NM_001190456	77312	+	AK289678 NM_001190457	92760	+	AF109681|ITGA11|22801|integrin, alpha 11##AF137378|ITGA11|22801|integrin, alpha 11##NM_001004439|ITGA11|22801|integrin, alpha 11##AK292445|ITGA11|22801|integrin, alpha 11##AK304778|ITGA11|22801|integrin, alpha 11##AK095863|ITGA11|22801|integrin, alpha 11##AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B##AK289678|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190457|CORO2B|10391|coronin, actin binding protein, 2B	0.99419	CTCF.p2:6:0.994
chr19	2261922	2262030	reg1021558.p1	6.686	+	AK056978 NM_144616	-5558	-	NM_000479	-12864	+	NM_007165 TSC_hg19_v1_chr19_+_2236834 AK314815 BC009903 BC041763 BC004434 BC015804	-25138	+	TSC_hg19_v1_chr19_+_2269523 AK307221 NM_004152 AK309122	7544	+	TSC_hg19_v1_chr19_+_2269526 BC042364	7550	+	TSC_hg19_v1_chr19_+_2269534 BC100291 BC013037 BC010063 BC081537 BC007247 BC053360 D87914 BC055397 U09202 BC093652 BC112133	7566	+	AK056978|JSRP1|126306|junctional sarcoplasmic reticulum protein 1##NM_144616|JSRP1|126306|junctional sarcoplasmic reticulum protein 1##NM_000479|AMH|268|anti-Mullerian hormone##NM_007165|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##AK314815|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##BC009903|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##BC004434|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##BC015804|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##AK307221|OAZ1|4946|ornithine decarboxylase antizyme 1##NM_004152|OAZ1|4946|ornithine decarboxylase antizyme 1##AK309122|SPPL2B|56928|signal peptide peptidase-like 2B##BC042364|OAZ1|4946|ornithine decarboxylase antizyme 1##BC100291|OAZ1|4946|ornithine decarboxylase antizyme 1##BC013037|OAZ1|4946|ornithine decarboxylase antizyme 1##BC010063|OAZ1|4946|ornithine decarboxylase antizyme 1##BC081537|OAZ1|4946|ornithine decarboxylase antizyme 1##BC007247|OAZ1|4946|ornithine decarboxylase antizyme 1##BC053360|OAZ1|4946|ornithine decarboxylase antizyme 1##D87914|OAZ1|4946|ornithine decarboxylase antizyme 1##BC055397|OAZ1|4946|ornithine decarboxylase antizyme 1##U09202|OAZ1|4946|ornithine decarboxylase antizyme 1##BC093652|OAZ1|4946|ornithine decarboxylase antizyme 1##BC112133|OAZ1|4946|ornithine decarboxylase antizyme 1	0.023558	
chr15	22509272	22509391	reg1020888.p1	6.685	+	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	-36109	-	BC136597 BC136598 NM_001005241 DQ786223	-126886	+	BC136985 NM_001004719	-140854	+	AK097517 NM_001001413	226914	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	324139	+	TSC_hg19_v1_chr15_+_22892666 AY763577	383268	+	BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AY763577|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	0.0	
chr2	30920205	30920311	reg1022259.p1	6.685	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	-250110	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-465756	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-550382	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	110035	-	AK122747 NM_001253827	432239	-	AY358758 AK225808 TSC_hg19_v1_chr2_-_31361308	441040	-	BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AY358758|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AK225808|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.830068	CTCF.p2:0:0.830
chr3	61922154	61922277	reg1020136.p2	6.685	+	AB055764 TSC_hg19_v1_chr3_-_61728812	-193404	-	L09247 AB385117 TSC_hg19_v1_chr3_+_61548071	-374239	+	BC047734 TSC_hg19_v1_chr3_+_61547294	-374929	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	382491	+	BC017772 NM_020685	383180	+	AK290464 NM_018008	436974	-	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2	0.971773	CTCF.p2:-3:0.972
chrX	47714036	47714139	reg1019139.p2	6.685	+	TSC_hg19_v1_chrX_+_47696322 BC039609	-17744	+	TSC_hg19_v1_chrX_+_47696313 AK126949 NM_007137	-17790	+	TSC_hg19_v1_chrX_-_47518553 AF083241 AK312072 AF092737 NM_004182 NM_153477	-195523	-	TSC_hg19_v1_chrX_-_47863389 BC114216 AK299325 AK122874 NM_001007088 NM_006962 NM_001178099	149266	-	AY358844 NM_205856	149646	+	NM_001079900 AF217622	153085	+	BC039609|ZNF81|347344|zinc finger protein 81##AK126949|ZNF81|347344|zinc finger protein 81##NM_007137|ZNF81|347344|zinc finger protein 81##AF083241|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AK312072|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AF092737|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##NM_004182|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##NM_153477|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##BC114216|ZNF182|7569|zinc finger protein 182##AK299325|ZNF182|7569|zinc finger protein 182##AK122874|ZNF182|7569|zinc finger protein 182##NM_001007088|ZNF182|7569|zinc finger protein 182##NM_006962|ZNF182|7569|zinc finger protein 182##NM_001178099|ZNF182|7569|zinc finger protein 182##AY358844|SPACA5|389852|sperm acrosome associated 5##NM_205856|SPACA5|389852|sperm acrosome associated 5##NM_001079900|SPACA5B|729201|sperm acrosome associated 5B##AF217622|SPACA5|389852|sperm acrosome associated 5	0.8969	CTCF.p2:-15:0.897
chr11	76391830	76391984	reg1003313.p1	6.684	+	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	-10098	-	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	-10939	-	TSC_hg19_v1_chr11_+_76156061 AK304043 BC033404 NM_020193 AK309621 BC021688 AK125114	-235804	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	102370	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	180025	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	180086	+	BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##AK304043|C11orf30|56946|chromosome 11 open reading frame 30##BC033404|C11orf30|56946|chromosome 11 open reading frame 30##NM_020193|C11orf30|56946|chromosome 11 open reading frame 30##AK309621|C11orf30|56946|chromosome 11 open reading frame 30##BC021688|C11orf30|56946|chromosome 11 open reading frame 30##AK125114|C11orf30|56946|chromosome 11 open reading frame 30##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3	0.025666	
chr1	383605	383700	reg1021323.p1	6.684	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-16004	+	NM_001005484	-314562	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-354247	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	238390	-	TSC_hg19_v1_chr1_-_714015 BC006361	330365	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	379243	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	0.26573	CTCF.p2:-30:0.266
chr5	133922980	133923140	reg1006749.p2	6.684	+	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	-61255	+	TSC_hg19_v1_chr5_+_133861359 AK056471 BC021962 AK292635 AK074123	-61697	+	TSC_hg19_v1_chr5_+_133842276 BC032795	-80770	+	BC002847 TSC_hg19_v1_chr5_-_133968519 AK223452 AF092130 BC093034 NM_001033503 NM_016103	45437	-	TSC_hg19_v1_chr5_+_133984493 AK304060 NM_001252231 NM_021982 BC019341	61371	+	TSC_hg19_v1_chr5_+_134074237 NM_001745 BC130325 AK313156 BC063532 U18242 AB590695 HQ258172 AF068179	151250	+	D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15##AK056471|PHF15|23338|PHD finger protein 15##BC021962|PHF15|23338|PHD finger protein 15##AK292635|PHF15|23338|PHD finger protein 15##AK074123|PHF15|23338|PHD finger protein 15##BC002847|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK223452|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AF092130|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##BC093034|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_001033503|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_016103|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001252231|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001745|CAMLG|819|calcium modulating ligand##BC130325|CAMLG|819|calcium modulating ligand##AK313156|CAMLG|819|calcium modulating ligand##BC063532|CAMLG|819|calcium modulating ligand##U18242|CAMLG|819|calcium modulating ligand##HQ258172|CAMLG|819|calcium modulating ligand##AF068179|CAMLG|819|calcium modulating ligand	0.0	
chr7	1457181	1457325	reg1021600.p1	6.684	+	TSC_hg19_v1_chr7_+_1272552 NM_001080461	-184651	+	TSC_hg19_v1_chr7_+_1200097 AK090593	-257140	+	TSC_hg19_v1_chr7_-_1199853 NM_182491	-257414	-	CU691530 EU832111 EU832205 AK074068 BC037988 TSC_hg19_v1_chr7_-_1499102	41780	-	TSC_hg19_v1_chr7_-_1499107 AK027124 NM_182924	41854	-	TSC_hg19_v1_chr7_-_1544019 AK093809 AX748318 NM_001080453	86780	-	NM_001080461|UNCX|340260|UNC homeobox##NM_182491|ZFAND2A|90637|zinc finger, AN1-type domain 2A##EU832111|MICALL2|79778|MICAL-like 2##EU832205|MICALL2|79778|MICAL-like 2##AK074068|MICALL2|79778|MICAL-like 2##BC037988|MICALL2|79778|MICAL-like 2##AK027124|MICALL2|79778|MICAL-like 2##NM_182924|MICALL2|79778|MICAL-like 2##NM_001080453|INTS1|26173|integrator complex subunit 1	0.042928	
chr15	45560474	45560579	reg1020275.p2	6.683	+	AK222709 NM_004212 U84392 AK291974	-16085	+	AK096267 NM_138356	-67154	-	TSC_hg19_v1_chr15_-_45480165 AK094391 AK303749	-80362	-	TSC_hg19_v1_chr15_-_45670743 CU678590 S68805 BC004141 AK098055 AK223585 AK294995 AK298350	110213	-	TSC_hg19_v1_chr15_-_45670958 NM_001482	110441	-	NM_024063 TSC_hg19_v1_chr15_+_45694551 AK291457 AK023232 AK225463 BC051861 BC000981 AK022348	134026	+	AK222709|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##NM_004212|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##U84392|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK291974|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK096267|SHF|90525|Src homology 2 domain containing F##NM_138356|SHF|90525|Src homology 2 domain containing F##AK094391|SHF|90525|Src homology 2 domain containing F##AK303749|SHF|90525|Src homology 2 domain containing F##S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##NM_024063|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK291457|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK023232|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK225463|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC051861|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC000981|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK022348|SPATA5L1|79029|spermatogenesis associated 5-like 1	0.991973	CTCF.p2:5:0.992
chr15	58369790	58369882	reg1020816.p2	6.683	+	NM_001206897 NM_003888 NM_170696	-11716	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	-11958	-	AB015228 AB015227 NM_170697	-63597	-	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	60650	+	NM_000236 X07228 AK293324 AK309448 TSC_hg19_v1_chr15_+_58724189 D83548 BC132825 BC136495 J03895 J03540 AB528021 HQ258274	354366	+	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	671953	-	NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9##NM_000236|LIPC|3990|lipase, hepatic##X07228|LIPC|3990|lipase, hepatic##AK293324|LIPC|3990|lipase, hepatic##AK309448|LIPC|3990|lipase, hepatic##D83548|LIPC|3990|lipase, hepatic##BC132825|LIPC|3990|lipase, hepatic##BC136495|LIPC|3990|lipase, hepatic##J03895|LIPC|3990|lipase, hepatic##J03540|LIPC|3990|lipase, hepatic##HQ258274|LIPC|3990|lipase, hepatic##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10	0.277915	CTCF.p2:0:0.278
chr18	45971975	45972101	reg1022384.p1	6.683	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-36329	-	AM988836 AK296709 NM_001039360 EF120357	-308339	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	-514549	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	93735	+	AK131394 NM_001190823	497109	-	AK301535 NM_001190822	503664	-	AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7	0.97155	CTCF.p2:-9:0.972
chr4	144829112	144829215	reg1020210.p2	6.683	+	EU176664 BC064396 BC017864 M29610 NM_002102 NM_198682	-2476	-	NM_001168235	-207336	-	TSC_hg19_v1_chr4_+_144480613 AX721285 AX721289 BC025996	-348547	+	AY509882 AY509883 AY950609 AY950610 AY950611 AY950612 U05255 J02982 BC121077 BC121078 EU338223 EU338224 EU338225 EU338226 EU338227 EU338228 EU338229 EU338230 EU338235 EU338236 EU338237 EU338238 BC069310 X08055 NM_002100	111304	-	AY950614 DQ893046 L07251 L07253 S77893 U00177 U00178 U00179 X57023 M12857 M36281 X51798 BC013328 EU338231 EU338232 EU338233 EU338234 L31860 X08054 BC005319 AK290561 NM_002099	232682	-	NM_022475 AY009951 TSC_hg19_v1_chr4_+_145567307 AY009317 BC025311 BC015636 BC009298	738085	+	EU176664|GYPE|2996|glycophorin E (MNS blood group)##BC064396|GYPE|2996|glycophorin E (MNS blood group)##BC017864|GYPE|2996|glycophorin E (MNS blood group)##M29610|GYPE|2996|glycophorin E (MNS blood group)##NM_002102|GYPE|2996|glycophorin E (MNS blood group)##NM_198682|GYPE|2996|glycophorin E (MNS blood group)##NM_001168235|FREM3|166752|FRAS1 related extracellular matrix 3##BC025996|GUSBP5|441046|glucuronidase, beta pseudogene 5##AY509882|GYPB|2994|glycophorin B (MNS blood group)##AY509883|GYPB|2994|glycophorin B (MNS blood group)##AY950609|GYPB|2994|glycophorin B (MNS blood group)##AY950610|GYPB|2994|glycophorin B (MNS blood group)##AY950611|GYPB|2994|glycophorin B (MNS blood group)##U05255|GYPB|2994|glycophorin B (MNS blood group)##J02982|GYPB|2994|glycophorin B (MNS blood group)##BC121077|GYPB|2994|glycophorin B (MNS blood group)##BC121078|GYPB|2994|glycophorin B (MNS blood group)##EU338223|GYPB|2994|glycophorin B (MNS blood group)##EU338224|GYPB|2994|glycophorin B (MNS blood group)##EU338225|GYPB|2994|glycophorin B (MNS blood group)##EU338226|GYPB|2994|glycophorin B (MNS blood group)##EU338227|GYPB|2994|glycophorin B (MNS blood group)##EU338228|GYPB|2994|glycophorin B (MNS blood group)##EU338229|GYPB|2994|glycophorin B (MNS blood group)##EU338230|GYPB|2994|glycophorin B (MNS blood group)##EU338235|GYPB|2994|glycophorin B (MNS blood group)##EU338236|GYPB|2994|glycophorin B (MNS blood group)##EU338237|GYPB|2994|glycophorin B (MNS blood group)##EU338238|GYPB|2994|glycophorin B (MNS blood group)##BC069310|GYPB|2994|glycophorin B (MNS blood group)##X08055|GYPB|2994|glycophorin B (MNS blood group)##NM_002100|GYPB|2994|glycophorin B (MNS blood group)##AY950614|GYPA|2993|glycophorin A (MNS blood group)##DQ893046|GYPA|2993|glycophorin A (MNS blood group)##L07251|GYPA|2993|glycophorin A (MNS blood group)##L07253|GYPA|2993|glycophorin A (MNS blood group)##U00177|GYPA|2993|glycophorin A (MNS blood group)##U00178|GYPA|2993|glycophorin A (MNS blood group)##U00179|GYPA|2993|glycophorin A (MNS blood group)##X57023|GYPA|2993|glycophorin A (MNS blood group)##M12857|GYPA|2993|glycophorin A (MNS blood group)##M36281|GYPA|2993|glycophorin A (MNS blood group)##X51798|GYPA|2993|glycophorin A (MNS blood group)##BC013328|GYPA|2993|glycophorin A (MNS blood group)##EU338231|GYPA|2993|glycophorin A (MNS blood group)##EU338232|GYPA|2993|glycophorin A (MNS blood group)##EU338233|GYPA|2993|glycophorin A (MNS blood group)##EU338234|GYPA|2993|glycophorin A (MNS blood group)##L31860|GYPA|2993|glycophorin A (MNS blood group)##X08054|GYPA|2993|glycophorin A (MNS blood group)##BC005319|GYPA|2993|glycophorin A (MNS blood group)##AK290561|GYPA|2993|glycophorin A (MNS blood group)##NM_002099|GYPA|2993|glycophorin A (MNS blood group)##NM_022475|HHIP|64399|hedgehog interacting protein##AY009951|HHIP|64399|hedgehog interacting protein##AY009317|HHIP|64399|hedgehog interacting protein##BC025311|HHIP|64399|hedgehog interacting protein##BC015636|HHIP|64399|hedgehog interacting protein##BC009298|HHIP|64399|hedgehog interacting protein	0.507182	CTCF.p2:2:0.507
chr4	150185432	150185562	reg1020874.p1	6.683	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-821913	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-822158	-	TSC_hg19_v1_chr4_-_149357955 AB587357	-827515	-	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	814028	+	NM_006439	1317579	+	TSC_hg19_v1_chr4_-_151770612 AB208838	1585152	-	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.999402	CTCF.p2:16:0.999
chr3	127266764	127266866	reg1019208.p1	6.682	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	-354821	+	AB385178 NM_032242 X87832	-559375	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-843738	+	AB037108 NM_016372	32464	-	TSC_hg19_v1_chr3_-_127309338 BC017058	42529	-	BC050711 NM_001136053 AF289568 TSC_hg19_v1_chr3_-_127309565 NM_001142646	42718	-	AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC017058|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC050711|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001136053|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##AF289568|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001142646|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	1.322851	CTCF.p2:-36:0.983	CTCF.p2:52:0.340
chr7	2144016	2144169	reg1021801.p1	6.682	+	TSC_hg19_v1_chr7_-_1980177 BC018870	-163929	-	NM_001128636	-395295	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-534271	+	AK310481 TSC_hg19_v1_chr7_-_2272542	128443	-	TSC_hg19_v1_chr7_-_2272559 AF083811	128468	-	TSC_hg19_v1_chr7_-_2272581 AK090959 AK310831 AK314227 AX746704 NM_001013836 NM_001013837 NM_003550	128488	-	BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AF083811|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK090959|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310831|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK314227|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013836|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013837|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_003550|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.146586	
chr9	117424516	117424639	reg1018946.p1	6.682	+	TSC_hg19_v1_chr9_+_117373735 NM_153045 AK289383 BC107133 BC107134 BX649023	-50808	+	TSC_hg19_v1_chr9_+_117350103 CU678965 CR456971 CR542237	-74470	+	NM_004888 TSC_hg19_v1_chr9_+_117350048 BC003564 AF038954 BC008452	-74539	+	NM_001199233	19791	-	AY434464 NM_001204344	130232	-	AB590753 AK291642 BC074940 BC074941 BC069435 AK313721 BC104462 BC104463 NM_005118 AF520785	143774	-	NM_153045|C9orf91|203197|chromosome 9 open reading frame 91##AK289383|C9orf91|203197|chromosome 9 open reading frame 91##BC107133|C9orf91|203197|chromosome 9 open reading frame 91##BC107134|C9orf91|203197|chromosome 9 open reading frame 91##BX649023|C9orf91|203197|chromosome 9 open reading frame 91##CR456971|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##CR542237|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##NM_004888|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC003564|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##AF038954|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##BC008452|ATP6V1G1|9550|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1##NM_001199233|LOC100505478|100505478|uncharacterized LOC100505478##AY434464|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001204344|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK291642|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074940|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074941|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC069435|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313721|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104462|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104463|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_005118|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AF520785|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15	0.954772	CTCF.p2:-7:0.955
chr1	32181340	32181462	reg1019933.p2	6.681	+	TSC_hg19_v1_chr1_-_32169619 NM_001856	-11708	-	M92642 TSC_hg19_v1_chr1_-_32169608	-11819	-	NM_012392	-70564	-	AB005298 NM_001703	48240	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	82839	-	TSC_hg19_v1_chr1_-_32264318 AK095829	82920	-	NM_001856|COL16A1|1307|collagen, type XVI, alpha 1##M92642|COL16A1|1307|collagen, type XVI, alpha 1##NM_012392|PEF1|553115|penta-EF-hand domain containing 1##AB005298|BAI2|576|brain-specific angiogenesis inhibitor 2##NM_001703|BAI2|576|brain-specific angiogenesis inhibitor 2##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1	0.163003	
chrX	43419048	43419172	reg1021503.p1	6.681	+	AB208859 AB590064 HQ258518 AY705392 AF035582 BC117311 BC143454 BC143456 AF032119 NM_001126054 NM_001126055 NM_003688 AK313399	-1636785	-	BC070180 NM_080817 AK122626 AK313702 AL832460	-1835690	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	-1870843	+	BC044787 TSC_hg19_v1_chrX_+_43514289	95113	+	TSC_hg19_v1_chrX_+_43515423 NM_000240 AK223499	96304	+	TSC_hg19_v1_chrX_+_43515457 M68840	96370	+	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##BC044787|MAOA|4128|monoamine oxidase A##NM_000240|MAOA|4128|monoamine oxidase A##AK223499|MAOA|4128|monoamine oxidase A##M68840|MAOA|4128|monoamine oxidase A	0.997215	CTCF.p2:-2:0.997
chr11	69616413	69616528	reg1019306.p1	6.680	+	M17446 NM_002007	-26300	-	AF110400 AY358302 NM_005117	-97365	-	TSC_hg19_v1_chr11_-_69490116 BC065542 AK294004 AF503940 AK311918 NM_153451 AK026600	-126332	-	NM_005247	17721	-	AY728143 NM_018043 TSC_hg19_v1_chr11_+_69924473	307970	+	NM_003824 TSC_hg19_v1_chr11_+_70049420 AK291005 AK293320 BC000334 X84709 U24231 BC025733 EU176185 AB587588 AY423721 BT006927 CR456738	432946	+	M17446|FGF4|2249|fibroblast growth factor 4##NM_002007|FGF4|2249|fibroblast growth factor 4##AF110400|FGF19|9965|fibroblast growth factor 19##AY358302|FGF19|9965|fibroblast growth factor 19##NM_005117|FGF19|9965|fibroblast growth factor 19##BC065542|ORAOV1|220064|oral cancer overexpressed 1##AK294004|ORAOV1|220064|oral cancer overexpressed 1##AF503940|ORAOV1|220064|oral cancer overexpressed 1##AK311918|ORAOV1|220064|oral cancer overexpressed 1##NM_153451|ORAOV1|220064|oral cancer overexpressed 1##AK026600|ORAOV1|220064|oral cancer overexpressed 1##NM_005247|FGF3|2248|fibroblast growth factor 3##AY728143|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_018043|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_003824|FADD|8772|Fas (TNFRSF6)-associated via death domain##AK291005|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC000334|FADD|8772|Fas (TNFRSF6)-associated via death domain##X84709|FADD|8772|Fas (TNFRSF6)-associated via death domain##U24231|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC025733|FADD|8772|Fas (TNFRSF6)-associated via death domain##EU176185|FADD|8772|Fas (TNFRSF6)-associated via death domain##AY423721|FADD|8772|Fas (TNFRSF6)-associated via death domain##BT006927|FADD|8772|Fas (TNFRSF6)-associated via death domain##CR456738|FADD|8772|Fas (TNFRSF6)-associated via death domain	1.871576	CTCF.p2:19:0.999	CTCF.p2:-70:0.872
chr3	72314615	72314787	reg1021807.p1	6.680	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-480430	-	AK313656 NM_173359	-510778	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-511179	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	582847	-	BC017274 TSC_hg19_v1_chr3_-_72897575	582874	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	582891	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.594926	CTCF.p2:0:0.595
chr6	137167324	137167420	reg1020600.p1	6.680	+	TSC_hg19_v1_chr6_+_137143749 U76560 BC006268 AB529018 CR542054 CR542076 CU675317 CU689196	-23597	+	TSC_hg19_v1_chr6_+_137143699 NM_000288 BC031606 U88871	-23670	+	TSC_hg19_v1_chr6_-_137113721 AB209093	-53630	-	AK316095 BC087842 NM_001008783 AK295424	76081	+	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	198466	-	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	198873	-	U76560|PEX7|5191|peroxisomal biogenesis factor 7##BC006268|PEX7|5191|peroxisomal biogenesis factor 7##CR542054|PEX7|5191|peroxisomal biogenesis factor 7##CR542076|PEX7|5191|peroxisomal biogenesis factor 7##NM_000288|PEX7|5191|peroxisomal biogenesis factor 7##BC031606|PEX7|5191|peroxisomal biogenesis factor 7##U88871|PEX7|5191|peroxisomal biogenesis factor 7##AB209093|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha	0.905946	CTCF.p2:13:0.906
chr11	68400432	68400535	reg1021344.p1	6.679	+	AK001920 TSC_hg19_v1_chr11_+_68367929	-32607	+	TSC_hg19_v1_chr11_+_68228219 NM_001164160 NM_001164161 NM_001164162 NM_001164163 NM_001164164 NM_018312 BC070121 AK298180 AK303315 AK315136 CR936718 CR749815 CR933658 AB046778	-172274	+	AF088027 TSC_hg19_v1_chr11_+_68115450	-285047	+	TSC_hg19_v1_chr11_+_68451978 NM_015973	51500	+	TSC_hg19_v1_chr11_+_68452011 BC030241	51537	+	TSC_hg19_v1_chr11_-_68518920 BC027593 AK292358 AK074817	118440	-	AK001920|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164160|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164161|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164162|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164163|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164164|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_018312|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##BC070121|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK298180|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK303315|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK315136|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR936718|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR749815|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR933658|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AB046778|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AF088027|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_015973|GAL|51083|galanin prepropeptide##BC030241|GAL|51083|galanin prepropeptide##BC027593|MTL5|9633|metallothionein-like 5, testis-specific (tesmin)##AK292358|MTL5|9633|metallothionein-like 5, testis-specific (tesmin)##AK074817|MTL5|9633|metallothionein-like 5, testis-specific (tesmin)	0.0	
chr1	27160207	27160333	reg1019158.p1	6.679	+	TSC_hg19_v1_chr1_+_27153178 BC066776 NM_032283	-7073	+	AK000484 AK225521 AK301626 NM_001202554 AK056539	-45589	+	TSC_hg19_v1_chr1_+_27114455 NM_017837 BC013568	-45814	+	BC023552 AF029082 NM_006142 TSC_hg19_v1_chr1_+_27189639 BC001550 BC000329 BC002995 BC000995 AB464718 M93010 DQ894162 CU674492 CR541905 CR541926	29395	+	CU675813 AY364261 TSC_hg19_v1_chr1_-_27216757 BC007815 BC008634 BC020272	56405	-	TSC_hg19_v1_chr1_-_27216775 AK022535 AY358864	56502	-	BC066776|ZDHHC18|84243|zinc finger, DHHC-type containing 18##NM_032283|ZDHHC18|84243|zinc finger, DHHC-type containing 18##AK000484|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK225521|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK301626|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_001202554|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK056539|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_017837|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##BC013568|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##BC023552|SFN|2810|stratifin##AF029082|SFN|2810|stratifin##NM_006142|SFN|2810|stratifin##BC001550|SFN|2810|stratifin##BC000329|SFN|2810|stratifin##BC002995|SFN|2810|stratifin##BC000995|SFN|2810|stratifin##M93010|SFN|2810|stratifin##DQ894162|SFN|2810|stratifin##CR541905|SFN|2810|stratifin##CR541926|SFN|2810|stratifin##AY364261|GPN2|54707|GPN-loop GTPase 2##BC007815|GPN2|54707|GPN-loop GTPase 2##BC008634|GPN2|54707|GPN-loop GTPase 2##BC020272|GPN2|54707|GPN-loop GTPase 2##AK022535|GPN2|54707|GPN-loop GTPase 2##AY358864|GPN2|54707|GPN-loop GTPase 2	0.023397	
chr4	119274142	119274254	reg1019980.p1	6.679	+	TSC_hg19_v1_chr4_-_119273910 AJ001531 BC007761 NM_003619	-273	-	TSC_hg19_v1_chr4_+_119199912 BC017993 BC039555	-74281	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	-318623	+	TSC_hg19_v1_chr4_+_119512929 AK024248	238736	+	TSC_hg19_v1_chr4_+_119606557 AK055555 AB046847 BC006565 BC007449 NM_020961 AB384254 CU675451	332413	+	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	483029	-	AJ001531|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC007761|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##NM_003619|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC017993|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##BC039555|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK024248|LOC729218|729218|uncharacterized LOC729218##AK055555|METTL14|57721|methyltransferase like 14##AB046847|METTL14|57721|methyltransferase like 14##BC006565|METTL14|57721|methyltransferase like 14##BC007449|METTL14|57721|methyltransferase like 14##NM_020961|METTL14|57721|methyltransferase like 14##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)	0.759129	CTCF.p2:23:0.749
chr7	128803878	128804020	reg1023549.p1	6.679	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-108744	-	TSC_hg19_v1_chr7_-_128695168 BC009923	-108801	-	AJ133769 AF145029 TSC_hg19_v1_chr7_-_128694965 AK312580 BC068530	-109054	-	BC009989 NM_005631	24763	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	60880	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	204037	+	AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3##AJ133769|TNPO3|23534|transportin 3##AF145029|TNPO3|23534|transportin 3##AK312580|TNPO3|23534|transportin 3##BC068530|TNPO3|23534|transportin 3##BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2	0.999628	CTCF.p2:3:1.000
chr19	42749014	42749126	reg1019124.p1	6.678	+	TSC_hg19_v1_chr19_-_42746755 BC027984	-2312	-	TSC_hg19_v1_chr19_-_42746729 BC051865 L40027 NM_019884	-2338	-	TSC_hg19_v1_chr19_-_42746704 D63424	-2379	-	AB463618 CU692500 DQ893568 DQ896817 TSC_hg19_v1_chr19_-_42759278 BC022231 U15655	10144	-	AK300627 TSC_hg19_v1_chr19_-_42759281 AK314278 NM_006494	10235	-	TSC_hg19_v1_chr19_+_42788616 AF363689 DQ388764 NM_015125 AB527445	39659	+	BC027984|GSK3A|2931|glycogen synthase kinase 3 alpha##BC051865|GSK3A|2931|glycogen synthase kinase 3 alpha##L40027|GSK3A|2931|glycogen synthase kinase 3 alpha##NM_019884|GSK3A|2931|glycogen synthase kinase 3 alpha##D63424|GSK3A|2931|glycogen synthase kinase 3 alpha##DQ893568|ERF|2077|Ets2 repressor factor##DQ896817|ERF|2077|Ets2 repressor factor##BC022231|ERF|2077|Ets2 repressor factor##U15655|ERF|2077|Ets2 repressor factor##AK300627|ERF|2077|Ets2 repressor factor##AK314278|ERF|2077|Ets2 repressor factor##NM_006494|ERF|2077|Ets2 repressor factor##AF363689|CIC|23152|capicua homolog (Drosophila)##NM_015125|CIC|23152|capicua homolog (Drosophila)	0.98002	CTCF.p2:16:0.980
chr4	11420357	11420484	reg1019465.p1	6.678	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-734019	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-961410	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-1301884	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	10112	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2065531	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2065555	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.993236	CTCF.p2:-13:0.993
chr11	56551009	56551151	reg1014432.p1	6.677	+	NM_001005284	-39794	-	AB463984 NM_001005213 NM_001013358	-83219	+	BC140745 NM_001004730	-119931	+	BC137198 NM_001005323	205287	+	AK127591 NM_001005210 BC136737 BC136739 BC150572	398219	+	AK075252 BC032688 AK315542 AK074514 X89271 NM_005161	453720	-	NM_001005284|OR9G4|283189|olfactory receptor, family 9, subfamily G, member 4##NM_001005213|OR9G1|390174|olfactory receptor, family 9, subfamily G, member 1##NM_001013358|OR9G9|504191|olfactory receptor, family 9, subfamily G, member 9##BC140745|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1##NM_001004730|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1##BC137198|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##NM_001005323|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##AK127591|LRRC55|219527|leucine rich repeat containing 55##NM_001005210|LRRC55|219527|leucine rich repeat containing 55##BC136737|LRRC55|219527|leucine rich repeat containing 55##BC136739|LRRC55|219527|leucine rich repeat containing 55##BC150572|LRRC55|219527|leucine rich repeat containing 55##AK075252|APLNR|187|apelin receptor##BC032688|APLNR|187|apelin receptor##AK315542|APLNR|187|apelin receptor##AK074514|APLNR|187|apelin receptor##X89271|APLNR|187|apelin receptor##NM_005161|APLNR|187|apelin receptor	0.999848	CTCF.p2:40:1.000
chr4	55185208	55185318	reg1020278.p1	6.677	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-89799	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-89983	+	AB028838 EU596451 NM_133267	-219041	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	338871	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	806491	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	1027153	+	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB028838|GSX2|170825|GS homeobox 2##EU596451|GSX2|170825|GS homeobox 2##NM_133267|GSX2|170825|GS homeobox 2##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3	0.157286	
chrX	128494332	128494446	reg1017730.p2	6.675	+	AY251532 BC014597 NM_138289	-1308029	-	NM_001122716	-2540643	+	TSC_hg19_v1_chrX_-_125686794 BC035674 NM_178470	-2807573	-	BC117447 BC143954 BC143955 AK026426 TSC_hg19_v1_chrX_-_128657421	163019	-	EU636009 TSC_hg19_v1_chrX_-_128657443	163055	-	TSC_hg19_v1_chrX_-_128657468 NM_003069 NM_139035	163073	-	AY251532|ACTRT1|139741|actin-related protein T1##BC014597|ACTRT1|139741|actin-related protein T1##NM_138289|ACTRT1|139741|actin-related protein T1##NM_001122716|CXorf64|100130613|chromosome X open reading frame 64##BC035674|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##NM_178470|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##BC117447|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC143954|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC143955|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##AK026426|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##EU636009|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_003069|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_139035|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	0.999449	CTCF.p2:-7:0.999
chrX	78142187	78142315	reg1018864.p2	6.675	+	NM_005296 AK314134	-139043	+	AK096184 NM_152694	-227427	-	BC035750 DQ131801 DQ131800 AK023929 DQ131802 NM_006639 AK313643 DQ131799	-559168	-	NM_014499 NM_198333 AK313218 AK292138 BC051875	58621	+	AF345567 BC104922 BC104924 NM_032553	284217	+	CR456875 CU691874 EU446983 AY359051 AB209310 BC040437 BC010511 TSC_hg19_v1_chrX_-_78622829 AK223327 AK303238 AF038953 BC034485	480532	-	NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##AK096184|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_152694|ZCCHC5|203430|zinc finger, CCHC domain containing 5##BC035750|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131801|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131800|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK023929|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131802|CYSLTR1|10800|cysteinyl leukotriene receptor 1##NM_006639|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK313643|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131799|CYSLTR1|10800|cysteinyl leukotriene receptor 1##NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AF345567|GPR174|84636|G protein-coupled receptor 174##BC104922|GPR174|84636|G protein-coupled receptor 174##BC104924|GPR174|84636|G protein-coupled receptor 174##NM_032553|GPR174|84636|G protein-coupled receptor 174##CR456875|ITM2A|9452|integral membrane protein 2A##EU446983|ITM2A|9452|integral membrane protein 2A##AY359051|ITM2A|9452|integral membrane protein 2A##AB209310|ITM2A|9452|integral membrane protein 2A##BC040437|ITM2A|9452|integral membrane protein 2A##BC010511|ITM2A|9452|integral membrane protein 2A##AK223327|ITM2A|9452|integral membrane protein 2A##AK303238|ITM2A|9452|integral membrane protein 2A##AF038953|ITM2A|9452|integral membrane protein 2A##BC034485|ITM2A|9452|integral membrane protein 2A	0.952012	CTCF.p2:-3:0.952
chr6	69678099	69678216	reg1019586.p1	6.674	+	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	-332756	+	AL833240 TSC_hg19_v1_chr6_-_69345026	-333185	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	-1079129	-	TSC_hg19_v1_chr6_-_70506472 AB074281	828320	-	TSC_hg19_v1_chr6_-_70506524 AK290069	828371	-	AF113224 TSC_hg19_v1_chr6_-_70506799 BC010360 AK225537 AK002102 AK225187	828630	-	NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##AB074281|LMBRD1|55788|LMBR1 domain containing 1##AK290069|LMBRD1|55788|LMBR1 domain containing 1##AF113224|LMBRD1|55788|LMBR1 domain containing 1##BC010360|LMBRD1|55788|LMBR1 domain containing 1##AK225537|LMBRD1|55788|LMBR1 domain containing 1##AK002102|LMBRD1|55788|LMBR1 domain containing 1##AK225187|LMBRD1|55788|LMBR1 domain containing 1	0.999818	CTCF.p2:-15:1.000
chr9	126964875	126965053	reg1020112.p2	6.674	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-190893	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-191081	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-272653	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	55046	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	55281	+	TSC_hg19_v1_chr9_+_127020255 AB026289	55300	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.813008	CTCF.p2:-8:0.813
chr14	79435610	79435738	reg1020550.p2	6.673	+	AB018286 BC152457 NM_004796	-565582	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-1169224	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-1208165	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	310030	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	1242230	-	AK292210 NM_000793	1261722	-	AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	0.998883	CTCF.p2:-15:0.999
chr1	171283079	171283178	reg1017109.p2	6.672	+	AK290113 AK315100 M64082 NM_002021 AK296198	-65467	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	-128706	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	-223087	+	BC002780 NM_002022 Z11737	300	+	TSC_hg19_v1_chr1_+_171454689 BC066968 NM_015172 BC058930 BC026108 BC045713 BC001260 BC006090	171566	+	AF253978 AL096857 TSC_hg19_v1_chr1_+_171481269 AF488829	198124	+	AK290113|FMO1|2326|flavin containing monooxygenase 1##AK315100|FMO1|2326|flavin containing monooxygenase 1##M64082|FMO1|2326|flavin containing monooxygenase 1##NM_002021|FMO1|2326|flavin containing monooxygenase 1##AK296198|FMO1|2326|flavin containing monooxygenase 1##NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##BC002780|FMO4|2329|flavin containing monooxygenase 4##NM_002022|FMO4|2329|flavin containing monooxygenase 4##Z11737|FMO4|2329|flavin containing monooxygenase 4##BC066968|PRRC2C|23215|proline-rich coiled-coil 2C##NM_015172|PRRC2C|23215|proline-rich coiled-coil 2C##BC058930|PRRC2C|23215|proline-rich coiled-coil 2C##BC026108|PRRC2C|23215|proline-rich coiled-coil 2C##BC045713|PRRC2C|23215|proline-rich coiled-coil 2C##BC001260|PRRC2C|23215|proline-rich coiled-coil 2C##BC006090|PRRC2C|23215|proline-rich coiled-coil 2C##AF253978|PRRC2C|23215|proline-rich coiled-coil 2C##AL096857|PRRC2C|23215|proline-rich coiled-coil 2C##AF488829|PRRC2C|23215|proline-rich coiled-coil 2C	0.901817	CTCF.p2:3:0.902
chr12	108386778	108386889	reg1021467.p1	6.672	+	AY238895 NM_203436	-218672	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-231832	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	-231923	-	BC110330 AB018332 NM_014653	136654	+	NM_001142345	327605	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	346251	-	AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1	0.0	
chr14	51009719	51009836	reg1020343.p1	6.672	+	NM_001127713	-9978	+	TSC_hg19_v1_chr14_-_50999306 BC036013 NM_006575 NM_198794 U77129	-10467	-	BC104977 NM_004196	-147161	-	NM_015915 NM_181598 AY032844 TSC_hg19_v1_chr14_+_51026833 AK223436 AK290185 BC010708	17013	+	AK312518 TSC_hg19_v1_chr14_+_51026862 AB385220 CU679803	17140	+	AJ292969 AK023071 TSC_hg19_v1_chr14_-_51135016 AK290883	125163	-	NM_001127713|ATL1|51062|atlastin GTPase 1##BC036013|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##NM_006575|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##NM_198794|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##U77129|MAP4K5|11183|mitogen-activated protein kinase kinase kinase kinase 5##BC104977|CDKL1|8814|cyclin-dependent kinase-like 1 (CDC2-related kinase)##NM_004196|CDKL1|8814|cyclin-dependent kinase-like 1 (CDC2-related kinase)##NM_015915|ATL1|51062|atlastin GTPase 1##NM_181598|ATL1|51062|atlastin GTPase 1##AY032844|ATL1|51062|atlastin GTPase 1##AK223436|ATL1|51062|atlastin GTPase 1##AK290185|ATL1|51062|atlastin GTPase 1##BC010708|ATL1|51062|atlastin GTPase 1##AK312518|ATL1|51062|atlastin GTPase 1##AJ292969|SAV1|60485|salvador homolog 1 (Drosophila)##AK023071|SAV1|60485|salvador homolog 1 (Drosophila)##AK290883|SAV1|60485|salvador homolog 1 (Drosophila)	1.012581	CTCF.p2:0:0.982
chr2	54334211	54334325	reg1021049.p1	6.672	+	TSC_hg19_v1_chr2_-_54198154 AB621805	-136136	-	D38521 TSC_hg19_v1_chr2_-_54197945 AY894756 AY894754 AY894755 NM_014614	-136387	-	AF072693 BC110915 TSC_hg19_v1_chr2_-_54087105 AK314885 NM_001164165 NM_006794	-247150	-	NM_138448 AK307096 BC012290 X84195 TSC_hg19_v1_chr2_+_54342769	8326	+	BC068576 AK097417 NM_001003937	149107	-	AK097617 NM_001100396 BC126244 BC126246 BC144191 BC144192 BC031669	223820	+	D38521|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894756|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894754|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894755|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##NM_014614|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AF072693|GPR75|10936|G protein-coupled receptor 75##BC110915|GPR75-ASB3|100302652|GPR75-ASB3 readthrough##AK314885|GPR75|10936|G protein-coupled receptor 75##NM_001164165|GPR75-ASB3|100302652|GPR75-ASB3 readthrough##NM_006794|GPR75|10936|G protein-coupled receptor 75##NM_138448|ACYP2|98|acylphosphatase 2, muscle type##AK307096|ACYP2|98|acylphosphatase 2, muscle type##BC012290|ACYP2|98|acylphosphatase 2, muscle type##X84195|ACYP2|98|acylphosphatase 2, muscle type##BC068576|TSPYL6|388951|TSPY-like 6##AK097417|TSPYL6|388951|TSPY-like 6##NM_001003937|TSPYL6|388951|TSPY-like 6##AK097617|C2orf73|129852|chromosome 2 open reading frame 73##NM_001100396|C2orf73|129852|chromosome 2 open reading frame 73##BC126244|C2orf73|129852|chromosome 2 open reading frame 73##BC126246|C2orf73|129852|chromosome 2 open reading frame 73##BC144191|C2orf73|129852|chromosome 2 open reading frame 73##BC144192|C2orf73|129852|chromosome 2 open reading frame 73##BC031669|C2orf73|129852|chromosome 2 open reading frame 73	0.026972	
chr2	54990921	54991051	reg1021494.p1	6.672	+	NM_001039753	-38838	+	TSC_hg19_v1_chr2_+_54785519 AF327441 NM_178313 BC137282 BC137283	-205421	+	TSC_hg19_v1_chr2_+_54684338 BC032061	-306619	+	TSC_hg19_v1_chr2_-_55199899 BC131571	208922	-	AJ251385 AM392753 AM393122 AM393280 AM393537 BC139928 DQ778739 AF087901 BC014366 TSC_hg19_v1_chr2_-_55237387 BC007109 AF177332 AF132048 BC001035 AF077050 AF125103 NM_007008 AY102276	246386	-	AK302741 AF333336 NM_207521 AY123248	285324	-	NM_001039753|EML6|400954|echinoderm microtubule associated protein like 6##AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AJ251385|RTN4|57142|reticulon 4##AM392753|RTN4|57142|reticulon 4##AM393122|RTN4|57142|reticulon 4##AM393280|RTN4|57142|reticulon 4##AM393537|RTN4|57142|reticulon 4##BC139928|RTN4|57142|reticulon 4##DQ778739|RTN4|57142|reticulon 4##AF087901|RTN4|57142|reticulon 4##BC014366|RTN4|57142|reticulon 4##BC007109|RTN4|57142|reticulon 4##AF177332|RTN4|57142|reticulon 4##AF132048|RTN4|57142|reticulon 4##BC001035|RTN4|57142|reticulon 4##AF077050|RTN4|57142|reticulon 4##AF125103|RTN4|57142|reticulon 4##NM_007008|RTN4|57142|reticulon 4##AY102276|RTN4|57142|reticulon 4##AK302741|RTN4|57142|reticulon 4##AF333336|RTN4|57142|reticulon 4##NM_207521|RTN4|57142|reticulon 4##AY123248|RTN4|57142|reticulon 4	0.811906	CTCF.p2:-18:0.792
chr3	141457033	141457153	reg1020781.p1	6.672	+	TSC_hg19_v1_chr3_+_141457045 NM_001201370 NM_014245 NM_183237	-24	+	TSC_hg19_v1_chr3_+_141205882 AK292016 AK301015 AF115573 D78155 D82880 NM_006506	-251222	+	AK311479 TSC_hg19_v1_chr3_+_141105293	-351805	+	TSC_hg19_v1_chr3_+_141457129 AK311982	27	+	TSC_hg19_v1_chr3_+_141457160 BC008627 BC005966 DQ891759 DQ894943 AB590187 AF092878 AF142060 AF312226 AK289894 BT007348	67	+	DQ426875 AF439409 AF282269 NM_139209 AB527155	39943	+	NM_001201370|RNF7|9616|ring finger protein 7##NM_014245|RNF7|9616|ring finger protein 7##NM_183237|RNF7|9616|ring finger protein 7##AK292016|RASA2|5922|RAS p21 protein activator 2##AK301015|RASA2|5922|RAS p21 protein activator 2##AF115573|RASA2|5922|RAS p21 protein activator 2##D78155|RASA2|5922|RAS p21 protein activator 2##D82880|RASA2|5922|RAS p21 protein activator 2##NM_006506|RASA2|5922|RAS p21 protein activator 2##AK311982|RNF7|9616|ring finger protein 7##BC008627|RNF7|9616|ring finger protein 7##BC005966|RNF7|9616|ring finger protein 7##DQ891759|RNF7|9616|ring finger protein 7##DQ894943|RNF7|9616|ring finger protein 7##AF092878|RNF7|9616|ring finger protein 7##AF142060|RNF7|9616|ring finger protein 7##AF312226|RNF7|9616|ring finger protein 7##BT007348|RNF7|9616|ring finger protein 7##AF439409|GRK7|131890|G protein-coupled receptor kinase 7##AF282269|GRK7|131890|G protein-coupled receptor kinase 7##NM_139209|GRK7|131890|G protein-coupled receptor kinase 7	0.042333	
chr6	36989594	36989718	reg1022463.p2	6.672	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-16155	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-35386	-	AK022783 TSC_hg19_v1_chr6_-_36953950 AF176006 AF192559 BC125055 BC153873 NM_014341 BC110914	-35679	-	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	148466	+	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	235730	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	235943	+	BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##AK022783|MTCH1|23787|mitochondrial carrier 1##AF176006|MTCH1|23787|mitochondrial carrier 1##AF192559|MTCH1|23787|mitochondrial carrier 1##BC125055|MTCH1|23787|mitochondrial carrier 1##BC153873|MTCH1|23787|mitochondrial carrier 1##NM_014341|MTCH1|23787|mitochondrial carrier 1##BC110914|MTCH1|23787|mitochondrial carrier 1##NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B	0.542198	CTCF.p2:-19:0.542
chr6	7722009	7722141	reg1021744.p1	6.672	+	TSC_hg19_v1_chr6_+_7590453 AL832462 NM_152551 AK292409 AK056796 BC054008 BC114631 BC114630 BC062458	-131616	+	TSC_hg19_v1_chr6_+_7579692 J05211	-142338	+	TSC_hg19_v1_chr6_+_7541904 AB621818 AK304182	-180145	+	TSC_hg19_v1_chr6_+_7726328 AK300628	4317	+	NM_001718 M60315 BC096084 BC096085 BC099624 BC099625 BC111763 BC112352 BC113018 BC113019 BC128031	4975	+	TSC_hg19_v1_chr6_-_7910300 AK315598 NM_001145549	188254	-	AL832462|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##NM_152551|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##AK292409|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##AK056796|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC054008|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC114631|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC114630|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC062458|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##J05211|DSP|1832|desmoplakin##AK304182|DSP|1832|desmoplakin##AK300628|BMP6|654|bone morphogenetic protein 6##NM_001718|BMP6|654|bone morphogenetic protein 6##M60315|BMP6|654|bone morphogenetic protein 6##BC096084|BMP6|654|bone morphogenetic protein 6##BC096085|BMP6|654|bone morphogenetic protein 6##BC099624|BMP6|654|bone morphogenetic protein 6##BC099625|BMP6|654|bone morphogenetic protein 6##BC111763|BMP6|654|bone morphogenetic protein 6##BC112352|BMP6|654|bone morphogenetic protein 6##BC113018|BMP6|654|bone morphogenetic protein 6##BC113019|BMP6|654|bone morphogenetic protein 6##BC128031|BMP6|654|bone morphogenetic protein 6##AK315598|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##NM_001145549|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)	0.036906	
chr18	66514644	66514756	reg1022323.p2	6.671	+	NM_024781 CR749520	-49358	+	NM_001093729 AK308114 AK091108	-132181	+	TSC_hg19_v1_chr18_-_66382346 AK122715 BC107422 NM_019022 BX647846 AK310389	-132264	-	TSC_hg19_v1_chr18_+_67068214 NM_152721 AY599248 BC096744	553530	+	AK313199 TSC_hg19_v1_chr18_-_67615110	1100399	-	GU935335 GU935336 U56102 NM_006566	1109495	-	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B##CR749520|CCDC102B|79839|coiled-coil domain containing 102B##NM_001093729|CCDC102B|79839|coiled-coil domain containing 102B##AK308114|CCDC102B|79839|coiled-coil domain containing 102B##AK091108|CCDC102B|79839|coiled-coil domain containing 102B##AK122715|TMX3|54495|thioredoxin-related transmembrane protein 3##BC107422|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_019022|TMX3|54495|thioredoxin-related transmembrane protein 3##BX647846|TMX3|54495|thioredoxin-related transmembrane protein 3##AK310389|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_152721|DOK6|220164|docking protein 6##AY599248|DOK6|220164|docking protein 6##BC096744|DOK6|220164|docking protein 6##AK313199|CD226|10666|CD226 molecule##GU935335|CD226|10666|CD226 molecule##GU935336|CD226|10666|CD226 molecule##U56102|CD226|10666|CD226 molecule##NM_006566|CD226|10666|CD226 molecule	0.01504	
chr19	2562100	2562217	reg1013480.p2	6.671	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-85920	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-105198	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-105222	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	140537	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	140584	-	AK124445 TSC_hg19_v1_chr19_-_2717420	155191	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr6	106181547	106181709	reg1019173.p1	6.671	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-330633	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-330670	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-330782	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	352568	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	352607	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	365176	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.994529	CTCF.p2:0:0.995
chr12	47473337	47473439	reg1017100.p2	6.670	+	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	-253632	-	TSC_hg19_v1_chr12_-_46766619 NM_018976	-706785	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-707099	-	TSC_hg19_v1_chr12_+_47473404 BC072670	9	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	195	-	BC008360 NM_138371	136663	+	AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC008360|FAM113B|91523|family with sequence similarity 113, member B##NM_138371|FAM113B|91523|family with sequence similarity 113, member B	0.0	
chr17	73102015	73102138	reg1019853.p2	6.670	+	TSC_hg19_v1_chr17_+_73084056 BC009684 NM_004695	-18021	+	TSC_hg19_v1_chr17_+_73043325 D79998	-58743	+	TSC_hg19_v1_chr17_+_73043288 BC033329 NM_015353	-58847	+	TSC_hg19_v1_chr17_+_73106069 AK300997 AK310697 BC011728 NM_024585	3978	+	TSC_hg19_v1_chr17_-_73127869 CU692564 BC002516 BC022334 BC008183 BC047763 BC017454 AF154829 AK000419 NM_001252377 NM_014595	25781	-	DQ891909 DQ895094 DQ896835 EU176653 CU674698 AF177862 BC001420 TSC_hg19_v1_chr17_-_73150608 AF266846 AK223321 AK312613	48476	-	BC009684|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##NM_004695|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##D79998|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC033329|KCTD2|23510|potassium channel tetramerisation domain containing 2##NM_015353|KCTD2|23510|potassium channel tetramerisation domain containing 2##AK300997|ARMC7|79637|armadillo repeat containing 7##BC011728|ARMC7|79637|armadillo repeat containing 7##NM_024585|ARMC7|79637|armadillo repeat containing 7##BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic##AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic##DQ891909|HN1|51155|hematological and neurological expressed 1##DQ895094|HN1|51155|hematological and neurological expressed 1##DQ896835|HN1|51155|hematological and neurological expressed 1##EU176653|HN1|51155|hematological and neurological expressed 1##AF177862|HN1|51155|hematological and neurological expressed 1##BC001420|HN1|51155|hematological and neurological expressed 1##AF266846|HN1|51155|hematological and neurological expressed 1##AK223321|HN1|51155|hematological and neurological expressed 1##AK312613|HN1|51155|hematological and neurological expressed 1	0.010867	
chr2	212869938	212870091	reg1020584.p2	6.670	+	AK316425 NM_001122634 AK302778 AY317138	-1411929	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-1448625	+	NM_001122633 AB208800	-1527596	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	533301	-	AK301503 AF130863 NM_016260	1145041	-	BC028936 NM_001079526	1146318	-	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	0.933671	CTCF.p2:-11:0.934
chr2	64978666	64978846	reg1021694.p2	6.670	+	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-97709	-	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-97907	-	TSC_hg19_v1_chr2_+_64751580 AL833962	-227154	+	TSC_hg19_v1_chr2_-_65090764 AK097952	111985	-	TSC_hg19_v1_chr2_-_65159574 BC037562	180821	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	236844	+	D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##AL833962|AFTPH|54812|aftiphilin##BC037562|LOC400958|400958|uncharacterized LOC400958##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.030477	
chr7	130125948	130126059	reg1016692.p1	6.669	+	BC056162 AK314676 TSC_hg19_v1_chr7_-_130080886 BC018789 AK026098 AJ278890 NM_018718 AK298618 AK311382 AF429308 AF429309	-45126	-	NM_001868 AK131054 AK291493 AK293366 BC005279 X67318 CU675077 DQ890565 DQ893728 BT007313	-105678	+	NM_001127441 NM_001127442 NM_080385 AK093288 AK315256 AX748034 BC039362 AY155230 BC053681 BC042996 AK131191 AY155229	-141339	+	TSC_hg19_v1_chr7_+_130126173 AK098397 NM_177524 CR627364 BC090049	113	+	NM_177525	5169	+	TSC_hg19_v1_chr7_+_130131926 D87367 BC011908 D78611 Y11534 BC002413 BC014564 BC018695 NM_002402 AK298984 AK312688	5963	+	BC056162|CEP41|95681|centrosomal protein 41kDa##AK314676|CEP41|95681|centrosomal protein 41kDa##BC018789|CEP41|95681|centrosomal protein 41kDa##AK026098|CEP41|95681|centrosomal protein 41kDa##AJ278890|CEP41|95681|centrosomal protein 41kDa##NM_018718|CEP41|95681|centrosomal protein 41kDa##AK298618|CEP41|95681|centrosomal protein 41kDa##AK311382|CEP41|95681|centrosomal protein 41kDa##AF429308|CEP41|95681|centrosomal protein 41kDa##AF429309|CEP41|95681|centrosomal protein 41kDa##NM_001868|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK131054|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK291493|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK293366|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC005279|CPA1|1357|carboxypeptidase A1 (pancreatic)##X67318|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ890565|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ893728|CPA1|1357|carboxypeptidase A1 (pancreatic)##BT007313|CPA1|1357|carboxypeptidase A1 (pancreatic)##NM_001127441|CPA5|93979|carboxypeptidase A5##NM_001127442|CPA5|93979|carboxypeptidase A5##NM_080385|CPA5|93979|carboxypeptidase A5##AK093288|CPA5|93979|carboxypeptidase A5##AK315256|CPA5|93979|carboxypeptidase A5##BC039362|CPA5|93979|carboxypeptidase A5##AY155230|CPA5|93979|carboxypeptidase A5##BC053681|CPA5|93979|carboxypeptidase A5##BC042996|CPA5|93979|carboxypeptidase A5##AK131191|CPA5|93979|carboxypeptidase A5##AY155229|CPA5|93979|carboxypeptidase A5##AK098397|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_177524|MEST|4232|mesoderm specific transcript homolog (mouse)##CR627364|MEST|4232|mesoderm specific transcript homolog (mouse)##BC090049|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_177525|MEST|4232|mesoderm specific transcript homolog (mouse)##D87367|MEST|4232|mesoderm specific transcript homolog (mouse)##BC011908|MEST|4232|mesoderm specific transcript homolog (mouse)##D78611|MEST|4232|mesoderm specific transcript homolog (mouse)##Y11534|MEST|4232|mesoderm specific transcript homolog (mouse)##BC002413|MEST|4232|mesoderm specific transcript homolog (mouse)##BC014564|MEST|4232|mesoderm specific transcript homolog (mouse)##BC018695|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_002402|MEST|4232|mesoderm specific transcript homolog (mouse)##AK298984|MEST|4232|mesoderm specific transcript homolog (mouse)##AK312688|MEST|4232|mesoderm specific transcript homolog (mouse)	0.038547	
chr12	75197189	75197329	reg1022328.p1	6.668	+	AK054742 TSC_hg19_v1_chr12_+_74933681	-263639	+	TSC_hg19_v1_chr12_+_74931622 BC009111 AL713650	-265620	+	NM_001136262 TSC_hg19_v1_chr12_+_74931614 AK056642	-265674	+	AK309245 AB209994 AK294269 TSC_hg19_v1_chr12_-_75603243	405969	-	AK094720 NM_139136 NM_139137 NM_153748	406251	-	BC033860 AK091839 AX747212 NM_032606	526560	-	BC009111|ATXN7L3B|552889|ataxin 7-like 3B##AL713650|ATXN7L3B|552889|ataxin 7-like 3B##NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B##AK056642|ATXN7L3B|552889|ataxin 7-like 3B##AK309245|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AB209994|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AK294269|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AK094720|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##NM_139136|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##NM_139137|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##NM_153748|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##BC033860|CAPS2|84698|calcyphosine 2##AK091839|CAPS2|84698|calcyphosine 2##NM_032606|CAPS2|84698|calcyphosine 2	0.0	
chr12	96455910	96456090	reg1000698.p2	6.668	+	AK301308 TSC_hg19_v1_chr12_-_96429399 AK310522 AK293630	-26585	-	CR457068 AB590523 AB209740 J02959 TSC_hg19_v1_chr12_-_96429366 BC032528 J03459 NM_000895 AK308184	-26667	-	BC096096 BC096097 BC096098 BC096099 D16626 AK303544 NM_002108 AK298736 AK297004 TSC_hg19_v1_chr12_-_96390137	-65926	-	TSC_hg19_v1_chr12_+_96588154 NM_005230 Z36715 AK312694	132126	+	TSC_hg19_v1_chr12_+_96588254 BC017371	132267	+	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	337983	-	AK301308|LTA4H|4048|leukotriene A4 hydrolase##AK293630|LTA4H|4048|leukotriene A4 hydrolase##CR457068|LTA4H|4048|leukotriene A4 hydrolase##AB209740|LTA4H|4048|leukotriene A4 hydrolase##J02959|LTA4H|4048|leukotriene A4 hydrolase##BC032528|LTA4H|4048|leukotriene A4 hydrolase##J03459|LTA4H|4048|leukotriene A4 hydrolase##NM_000895|LTA4H|4048|leukotriene A4 hydrolase##AK308184|LTA4H|4048|leukotriene A4 hydrolase##BC096096|HAL|3034|histidine ammonia-lyase##BC096097|HAL|3034|histidine ammonia-lyase##BC096098|HAL|3034|histidine ammonia-lyase##BC096099|HAL|3034|histidine ammonia-lyase##D16626|HAL|3034|histidine ammonia-lyase##AK303544|HAL|3034|histidine ammonia-lyase##NM_002108|HAL|3034|histidine ammonia-lyase##AK298736|HAL|3034|histidine ammonia-lyase##AK297004|HAL|3034|histidine ammonia-lyase##NM_005230|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##Z36715|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK312694|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17	0.0	
chr6	16184443	16184578	reg1023805.p1	6.668	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-41200	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-55073	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	-55208	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	54341	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	577187	-	NM_001190766	917978	+	AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236	0.98823	CTCF.p2:8:0.988
chr6	54857748	54857849	reg1020684.p1	6.668	+	AK055204 NM_001010872 BC101628 BC112275	-146210	+	BC070278 NM_014464 AK312918 BC056235 AB022277 AF195116 AF195117 CU687080 CU691132 EU832329 EU832414	-684523	+	NM_138569 BX647567 AK055530	-974048	+	NM_001526 AK314279	181296	+	AY358198 NM_207410	334468	+	CU692876 AL137605 AK293856 BC024194 AK055075 AK297191 AK294210 AK127587 NM_001042406 NM_019036	586134	-	AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B##BC070278|TINAG|27283|tubulointerstitial nephritis antigen##NM_014464|TINAG|27283|tubulointerstitial nephritis antigen##AK312918|TINAG|27283|tubulointerstitial nephritis antigen##BC056235|TINAG|27283|tubulointerstitial nephritis antigen##AB022277|TINAG|27283|tubulointerstitial nephritis antigen##AF195116|TINAG|27283|tubulointerstitial nephritis antigen##AF195117|TINAG|27283|tubulointerstitial nephritis antigen##EU832329|TINAG|27283|tubulointerstitial nephritis antigen##EU832414|TINAG|27283|tubulointerstitial nephritis antigen##NM_138569|MLIP|90523|muscular LMNA-interacting protein##BX647567|MLIP|90523|muscular LMNA-interacting protein##AK055530|MLIP|90523|muscular LMNA-interacting protein##NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2##AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2##AY358198|GFRAL|389400|GDNF family receptor alpha like##NM_207410|GFRAL|389400|GDNF family receptor alpha like##AL137605|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK293856|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##BC024194|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK055075|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK297191|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK294210|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK127587|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_001042406|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_019036|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1	0.982625	CTCF.p2:2:0.983
chr9	37329698	37329828	reg1021199.p1	6.668	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-209180	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-209255	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-209277	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	92943	+	BC010007 TSC_hg19_v1_chr9_-_37465267	135497	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	135632	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.15958	
chrX	153849428	153849531	reg1022082.p1	6.668	+	AJ275978 AJ003149 BC130362 BC130364 NM_001327 NM_139250 U87459	-2024	-	NM_001327 NM_139250 U87459 BC130362 BC130364 AJ003149 AJ275978	-35997	+	AF261086 NM_003639 AF091453	-73382	+	AJ012833 AM393026 AM393495 AM393696 AM393839 AB463462 BC002833 BC113998 BC114933 BC128045 AJ223041 AY679088 AY679089 AJ012834 AJ012835 AJ223040 NM_020994 NM_172377	32325	-	TSC_hg19_v1_chrX_-_153979326 AB463697 AK126283 AY057989 NM_001081573 NM_080612 AK307927	129818	-	TSC_hg19_v1_chrX_-_153979807 AL832051 DQ656063	130347	-	AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AF261086|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##NM_003639|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AF091453|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AJ012833|CTAG2|30848|cancer/testis antigen 2##AM393026|CTAG2|30848|cancer/testis antigen 2##AM393495|CTAG2|30848|cancer/testis antigen 2##AM393696|CTAG2|30848|cancer/testis antigen 2##AM393839|CTAG2|30848|cancer/testis antigen 2##BC002833|CTAG2|30848|cancer/testis antigen 2##BC113998|CTAG2|30848|cancer/testis antigen 2##BC114933|CTAG2|30848|cancer/testis antigen 2##BC128045|CTAG2|30848|cancer/testis antigen 2##AJ223041|CTAG2|30848|cancer/testis antigen 2##AY679088|CTAG2|30848|cancer/testis antigen 2##AY679089|CTAG2|30848|cancer/testis antigen 2##AJ012834|CTAG2|30848|cancer/testis antigen 2##AJ012835|CTAG2|30848|cancer/testis antigen 2##AJ223040|CTAG2|30848|cancer/testis antigen 2##NM_020994|CTAG2|30848|cancer/testis antigen 2##NM_172377|CTAG2|30848|cancer/testis antigen 2##AK126283|GAB3|139716|GRB2-associated binding protein 3##AY057989|GAB3|139716|GRB2-associated binding protein 3##NM_001081573|GAB3|139716|GRB2-associated binding protein 3##NM_080612|GAB3|139716|GRB2-associated binding protein 3##AK307927|GAB3|139716|GRB2-associated binding protein 3##AL832051|GAB3|139716|GRB2-associated binding protein 3	0.995652	CTCF.p2:-9:0.996
chr12	120087167	120087265	reg1019248.p1	6.667	+	NM_001136534 AK296289	-55916	+	BC040553 NM_178499	-314700	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	-470537	+	TSC_hg19_v1_chr12_+_120105769 AK312495 NM_006253 BC017671 AF022116 BC001007 BC001056 BC001823 BC018818 U83994 AK301165 Y12556 AB590811 AJ224515	18636	+	AK123136 TSC_hg19_v1_chr12_-_120241305	154081	-	TSC_hg19_v1_chr12_-_120315112 AY209000 AY257469 BC008127 AY681966 NM_001206999 NM_007174	227877	-	NM_001136534|TMEM233|387890|transmembrane protein 233##AK296289|TMEM233|387890|transmembrane protein 233##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##AK312495|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##NM_006253|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC017671|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AF022116|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001007|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001056|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001823|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC018818|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##U83994|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK301165|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##Y12556|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AJ224515|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK123136|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY209000|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY257469|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##BC008127|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY681966|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_001206999|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_007174|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)	0.987763	CTCF.p2:-6:0.988
chr2	64539593	64539749	reg1019420.p2	6.667	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-168147	-	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	-293166	-	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	-293409	-	TSC_hg19_v1_chr2_+_64681295 NM_014181	141629	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	141977	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	211813	+	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin	0.0	
chr1	16983190	16983309	reg1022715.p1	6.666	+	AK123337 TSC_hg19_v1_chr1_-_16971178	-12072	-	TSC_hg19_v1_chr1_-_16971175 AK090414	-12083	-	TSC_hg19_v1_chr1_-_16940046 AK123260 AY894575 NM_017940 BC066930 BC010124 BC082236 BC110431 AK055895 BC093404	-43353	-	TSC_hg19_v1_chr1_+_17248425 NM_014675	265185	+	TSC_hg19_v1_chr1_-_17307116 BC028033 AK222751 BC015039 NM_001135248 NM_002403	323900	-	AK301655 NM_001135247 NM_017459	324827	-	AK123337|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK123260|NBPF1|55672|neuroblastoma breakpoint family, member 1##AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_017940|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC066930|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC010124|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC110431|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK055895|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC093404|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_014675|CROCC|9696|ciliary rootlet coiled-coil, rootletin##BC028033|MFAP2|4237|microfibrillar-associated protein 2##AK222751|MFAP2|4237|microfibrillar-associated protein 2##BC015039|MFAP2|4237|microfibrillar-associated protein 2##NM_001135248|MFAP2|4237|microfibrillar-associated protein 2##NM_002403|MFAP2|4237|microfibrillar-associated protein 2##AK301655|MFAP2|4237|microfibrillar-associated protein 2##NM_001135247|MFAP2|4237|microfibrillar-associated protein 2##NM_017459|MFAP2|4237|microfibrillar-associated protein 2	0.861032	CTCF.p2:5:0.861
chr3	15093151	15093321	reg1021999.p2	6.666	+	TSC_hg19_v1_chr3_-_14989860 AK096279 BC033386	-103343	-	BC008609 TSC_hg19_v1_chr3_-_14989656	-103599	-	BC056913 TSC_hg19_v1_chr3_-_14989505	-103774	-	CU678518 AK024433 AK024702 AK294123 BC003590 TSC_hg19_v1_chr3_-_15106800	13515	-	TSC_hg19_v1_chr3_-_15106823 NM_022497 AK298791	13578	-	AB209673 TSC_hg19_v1_chr3_-_15140645	47398	-	AK096279|LOC100505641|100505641|uncharacterized LOC100505641##BC033386|LOC100505641|100505641|uncharacterized LOC100505641##BC008609|LOC100505641|100505641|uncharacterized LOC100505641##BC056913|LOC100505641|100505641|uncharacterized LOC100505641##AK024433|MRPS25|64432|mitochondrial ribosomal protein S25##AK024702|MRPS25|64432|mitochondrial ribosomal protein S25##AK294123|MRPS25|64432|mitochondrial ribosomal protein S25##BC003590|MRPS25|64432|mitochondrial ribosomal protein S25##NM_022497|MRPS25|64432|mitochondrial ribosomal protein S25##AK298791|MRPS25|64432|mitochondrial ribosomal protein S25##AB209673|ZFYVE20|64145|zinc finger, FYVE domain containing 20	0.181532	
chr17	58498930	58499110	reg1011862.p2	6.665	+	TSC_hg19_v1_chr17_-_58469580 NM_032582 AK057301	-29348	-	TSC_hg19_v1_chr17_-_58469447 AF533230	-29562	-	CU691084 TSC_hg19_v1_chr17_-_58469313 BC054344	-29702	-	TSC_hg19_v1_chr17_+_58499858 NM_181707 BC036356 BC048806	859	+	AB587349 TSC_hg19_v1_chr17_-_58603343 AK292227	104309	-	AK307666 TSC_hg19_v1_chr17_-_58603582 BC018121 AF017782 D86981 NM_006380	104517	-	NM_032582|USP32|84669|ubiquitin specific peptidase 32##AK057301|USP32|84669|ubiquitin specific peptidase 32##AF533230|USP32|84669|ubiquitin specific peptidase 32##BC054344|USP32|84669|ubiquitin specific peptidase 32##NM_181707|C17orf64|124773|chromosome 17 open reading frame 64##BC036356|C17orf64|124773|chromosome 17 open reading frame 64##BC048806|C17orf64|124773|chromosome 17 open reading frame 64##AK292227|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##AK307666|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##BC018121|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##AF017782|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##D86981|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##NM_006380|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2	0.332973	CTCF.p2:-10:0.333
chr20	10592137	10592248	reg1021737.p2	6.665	+	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-176216	+	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	-177353	-	AF221993 NM_018848	-179623	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	62012	-	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	62377	-	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1279257	+	BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3	0.978394	CTCF.p2:-9:0.978
chr2	51937581	51937690	reg1018577.p1	6.665	+	EF539882 AK124726 NM_001135659 NM_004801	-678031	-	TSC_hg19_v1_chr2_-_51259258 BC046631	-678377	-	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	-1362713	-	BC019239 BC025376 NM_001008708 BC053896 BC017941 AK097260	2057321	+	AK056069 NM_001201965 BC009569 AB209795 TSC_hg19_v1_chr2_-_54014091 AK000985 AK303133 AK001283 NM_016115 NM_145863	2076443	-	NM_001127397 NM_001127398 NM_015701 TSC_hg19_v1_chr2_+_54014180 AY358717 AK001913 AY453410 BC013129 BC022228 AK315477 DQ894762	2076572	+	EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1##BC046631|NRXN1|9378|neurexin 1##AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##BC019239|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC025376|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##NM_001008708|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC053896|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC017941|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##AK056069|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_001201965|ASB3|51130|ankyrin repeat and SOCS box containing 3##BC009569|ASB3|51130|ankyrin repeat and SOCS box containing 3##AB209795|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK000985|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK303133|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK001283|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_016115|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_145863|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_001127397|ERLEC1|27248|endoplasmic reticulum lectin 1##NM_001127398|ERLEC1|27248|endoplasmic reticulum lectin 1##NM_015701|ERLEC1|27248|endoplasmic reticulum lectin 1##AY358717|ERLEC1|27248|endoplasmic reticulum lectin 1##AK001913|ERLEC1|27248|endoplasmic reticulum lectin 1##AY453410|ERLEC1|27248|endoplasmic reticulum lectin 1##BC013129|ERLEC1|27248|endoplasmic reticulum lectin 1##BC022228|ERLEC1|27248|endoplasmic reticulum lectin 1##AK315477|ERLEC1|27248|endoplasmic reticulum lectin 1##DQ894762|ERLEC1|27248|endoplasmic reticulum lectin 1	0.484264	CTCF.p2:26:0.365
chr11	90192700	90192820	reg1021086.p2	6.664	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-208350	+	AK290231 NM_001144073 NM_012124	-236229	-	CU687242 BC002339 BC072461 TSC_hg19_v1_chr11_-_89956218 AF192466 AK226099 AK225565 AK312663 AF123249 AK225365	-236558	-	NM_001008781	1892501	+	BC069163 NM_005959 U25341 AY521019	2510079	+	TSC_hg19_v1_chr11_-_92930978 CU690400	2738227	-	AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC002339|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC072461|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF192466|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK226099|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225565|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK312663|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF123249|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225365|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B	0.094335	
chr22	22697339	22697449	reg1018128.p2	6.664	+	TSC_hg19_v1_chr22_+_22676817 X64134 BC072392 X01147 X14583 AF026921 M99594 X52109 Z34915 M23164 M25909 X57806 HM996126 HM996151 HM996396 AY686894 FJ385568 HM996502 AJ430768 AJ430769 S77011 AB063974 AB063975 AB063986 AB063989 AB064002 AB064006 AB064009 AB064015 AB064025 AB064029 AB064033 AB064034 AB064035 AB114462 AB363340 AB363378 AB363388 AB363391 AB363396 AB363397 AF107243 AF107248 AF115349 AF115350 AF115351 AF124169 AF212992 AF462682 AJ238329 AJ238331 AJ298040 AJ399840 AJ399841 AJ399842 AJ399844 AJ399846 AJ399850 AJ399851 AJ399853 AJ399854 AJ399858 AJ399859 AJ399860 AJ399861 AJ399864 AJ399865 AM181147 AY043113 AY043142 AY515013 AY626661 AY626662 AY942003 AY942034 AY942047 AY942062 AY942072 AY942089 AY942103 AY942110 AY942122 AY942123 DQ098732 DQ098756 DQ109965 DQ109969 DQ187592 DQ187611 DQ187713 DQ187716 DQ187726 DQ322770 DQ322811 DQ322812 DQ322941 DQ322976 DQ322977 DQ490727 DQ840921 DQ840926 DQ840927 DQ840929 DQ840934 DQ840936 DQ840964 DQ840965 DQ840966 DQ840967 DQ840968 DQ840974 DQ841004 DQ841007 DQ841066 DQ841091 DQ841096 EF589418 EF589522 EF589535 EF589539 EF589563 EF589567 EU599335 FJ385464 JF740070 JF806463 JF806464 JF806465 JF806466 JF806467 L14452 L25298 L33985 L43120 M28078 U36536 U36537 U36538 U36539 U36540 U36541 U38335 U38336 U38337 U38338 U38339 U38340 U38341 U38342 U38343 U38344 U38345 U38346 U38347 X61641 X77018 X77473 Y09391 Z35495 Z46618 Z74662 Z74673 Z74675 Z74676 Z74677 Z74678 Z74679 Z74680 Z74691 DQ098729 DQ098733 DQ098760 AY050701 AJ399862 AJ633627 AY950790 U09886 U09906 AY062363 DQ322978 AF044479 AF044480 AF165108 AF165110 AJ233720 AJ241352 AJ241358 AJ241364 AJ241370 AJ241372 AJ241373 AJ241374 AM259149 AY960869 X79782 AJ233725 AJ233731 AM259147 L19909 L38567 U27188 U27190 AF103609 AF103652 S79247 AF103678 AF103599 AF103672 AF103707 Y17942 AF103603 AF103607 AF103688 AF103627 AF103666 AY134496 AY145444 AF103699 DQ187717 AY998676	-20434	+	TSC_hg19_v1_chr22_+_22652513 BC033148 AK090629 AX746545 BX641141	-44875	+	BC017922 NM_007128 CR456609 CU013205 CU013493 AB590106	-98183	+	L22589 TSC_hg19_v1_chr22_+_22697538 BC022822	148	+	TSC_hg19_v1_chr22_+_22712096 BC030984 BC075843 X54438 DQ892642 DQ895879 M28137 X57822 X54446 L26896 AM184067 HM996235 HM996274 HM996539 AY686916 AJ430770 AJ430772 AB063980 AB063981 AB063982 AB064003 AB064007 AB064014 AB064038 AB064039 AB064040 AF233252 AF396471 AF396473 AF396475 AF396477 AF396479 AF533987 AJ001170 AJ278777 AY043091 AY193809 AY193811 AY193813 AY193815 AY193817 AY193819 AY530326 AY685379 AY685380 AY942030 DQ098730 DQ098789 DQ187504 DQ187523 DQ187610 DQ187635 DQ205148 DQ322743 DQ322815 DQ322903 DQ840922 DQ840928 DQ841053 DQ841056 DQ841057 DQ841071 DQ841072 DQ841093 EF589384 EF589428 EF589436 EF589440 EF589458 EF589479 EF589531 HQ890344 HQ890346 HQ890348 HQ890352 JF740069 JF806462 U96394 Z74670 AY847517 AF001790 AY099260 AY950796 AY950798 AY957533 DQ098791 AF044477 AF044478 AJ408273 AJ408278 AY686929 X98752 AY206991 DQ098790 EF638806 AJ241360 AF103691 AF103721 EF710815 EF710816 EF710817 EF710818 EF710819 EF710820 EF710821 EF710822 AF103654 AF103631 AF103670 Z46312 AF103604 Z46625 AY577301 AF103619	14846	+	TSC_hg19_v1_chr22_+_22723981 CR936629 U43772 L19893 AB363342 AB363367 AB363377 AB363400 AF442764 AM181374 AY942049 M80915 M80917 M80918 M80919 AM184008 AM184047 AM184048 AF047267 AF047268 AF047269	26683	+	BC033148|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##AK090629|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##BX641141|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##BC017922|VPREB1|7441|pre-B lymphocyte 1##NM_007128|VPREB1|7441|pre-B lymphocyte 1##CR456609|VPREB1|7441|pre-B lymphocyte 1##CU013205|VPREB1|7441|pre-B lymphocyte 1##CU013493|VPREB1|7441|pre-B lymphocyte 1##BC030984|IGLV1-44|28823|immunoglobulin lambda variable 1-44##DQ892642|IGL@|3535|immunoglobulin lambda locus##DQ895879|IGL@|3535|immunoglobulin lambda locus##U96394|IGLV1-44|28823|immunoglobulin lambda variable 1-44	0.99826	CTCF.p2:-18:0.998
chr3	79411064	79411161	reg1020126.p1	6.664	+	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-342525	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-744127	-	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-2321832	+	NM_002941	405946	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	2399585	-	TSC_hg19_v1_chr3_-_81810798 AK312245	2399686	-	NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.999885	CTCF.p2:1:1.000
chr5	52721979	52722092	reg1022174.p1	6.664	+	TSC_hg19_v1_chr5_-_52405588 BC029287 AF091871 AF117815 AK312887 NM_176806 BC095417	-316439	-	BC046097 AF155659 NM_004531	-316730	-	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	-436915	+	NM_006350 NM_013409 TSC_hg19_v1_chr5_+_52776278	54242	+	TSC_hg19_v1_chr5_+_52776409 BC004107	54377	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	54515	+	BC029287|MOCS2|4338|molybdenum cofactor synthesis 2##AF091871|MOCS2|4338|molybdenum cofactor synthesis 2##AF117815|MOCS2|4338|molybdenum cofactor synthesis 2##AK312887|MOCS2|4338|molybdenum cofactor synthesis 2##NM_176806|MOCS2|4338|molybdenum cofactor synthesis 2##BC095417|MOCS2|4338|molybdenum cofactor synthesis 2##BC046097|MOCS2|4338|molybdenum cofactor synthesis 2##AF155659|MOCS2|4338|molybdenum cofactor synthesis 2##NM_004531|MOCS2|4338|molybdenum cofactor synthesis 2##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##NM_006350|FST|10468|follistatin##NM_013409|FST|10468|follistatin##BC004107|FST|10468|follistatin##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin	0.994302	CTCF.p2:-3:0.994
chr7	30324525	30324700	reg1019506.p3	6.664	+	TSC_hg19_v1_chr7_+_30324515 AF527533	-63	+	AF513707 NM_147128	-690	+	TSC_hg19_v1_chr7_+_30174621 NM_152793 AK096533 AL834391 AK098769 AB528783 AK294982	-150030	+	TSC_hg19_v1_chr7_+_30324634 AY054122	44	+	AY128682 AY128683 AY128684 AY128685 AY128686 AF113925 BC040339 AK300367 AK023969 NM_006092	193709	-	CU674304 TSC_hg19_v1_chr7_-_30544445 BC013937 BC005356 AK315608 BC019243 BC000625 NM_001199815 NM_001199816 NM_001199817 NM_024051	219789	-	AF527533|ZNRF2|223082|zinc and ring finger 2##AF513707|ZNRF2|223082|zinc and ring finger 2##NM_147128|ZNRF2|223082|zinc and ring finger 2##NM_152793|C7orf41|222166|chromosome 7 open reading frame 41##AK096533|C7orf41|222166|chromosome 7 open reading frame 41##AL834391|C7orf41|222166|chromosome 7 open reading frame 41##AK098769|C7orf41|222166|chromosome 7 open reading frame 41##AK294982|C7orf41|222166|chromosome 7 open reading frame 41##AY054122|ZNRF2|223082|zinc and ring finger 2##AY128682|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128683|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128684|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128685|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128686|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AF113925|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC040339|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK300367|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK023969|NOD1|10392|nucleotide-binding oligomerization domain containing 1##NM_006092|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC013937|GGCT|79017|gamma-glutamylcyclotransferase##BC005356|GGCT|79017|gamma-glutamylcyclotransferase##AK315608|GGCT|79017|gamma-glutamylcyclotransferase##BC019243|GGCT|79017|gamma-glutamylcyclotransferase##BC000625|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199815|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199816|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199817|GGCT|79017|gamma-glutamylcyclotransferase##NM_024051|GGCT|79017|gamma-glutamylcyclotransferase	0.119916	
chr6	140317691	140317830	reg1022621.p1	6.663	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-621976	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-621999	-	NM_001168389 NM_001168388	-622337	-	BC095542 GU727635 M73482 NM_002511	2092104	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	2150630	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	2150646	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.583615	CTCF.p2:16:0.584
chr9	103364738	103364888	reg1023978.p1	6.663	+	NM_001018116 AK300099 TSC_hg19_v1_chr9_+_103340380 EU487253 BC090888	-24424	+	TSC_hg19_v1_chr9_+_103235637 BC035056 DQ891732 DQ894909	-129084	+	TSC_hg19_v1_chr9_+_103235495 NM_003692	-129309	+	NM_207299 AK303807 TSC_hg19_v1_chr9_+_103791087	426253	+	AK000307 AK225306 BC029380 NM_017753 TSC_hg19_v1_chr9_+_103947336	582513	+	NM_001127610 AK315347	781009	-	NM_001018116|MURC|347273|muscle-related coiled-coil protein##AK300099|MURC|347273|muscle-related coiled-coil protein##EU487253|MURC|347273|muscle-related coiled-coil protein##BC090888|MURC|347273|muscle-related coiled-coil protein##BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_207299|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK303807|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_001127610|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##AK315347|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)	0.995796	CTCF.p2:5:0.996
chr10	103600406	103600551	reg1000289.p2	6.662	+	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	-866	-	TSC_hg19_v1_chr10_-_103578213 NM_001142434 NM_012215	-22260	-	TSC_hg19_v1_chr10_-_103578192 BC032591	-22292	-	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	3129	-	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	215434	-	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	224664	+	DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##NM_001142434|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##NM_012215|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC032591|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6	0.0	
chr21	43801629	43801791	reg1021495.p2	6.662	+	M12075 BC032811 NM_003225 X00474 X52003	-15088	-	X51698 BC032820 NM_005423	-30572	-	NM_003226 AF432265	-65978	-	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	14451	-	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	22302	+	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	114670	-	M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2##NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)	1.784909	CTCF.p2:7:0.999	CTCF.p2:-38:0.786
chr1	22029900	22030064	reg1022036.p1	6.661	+	AB007943 M64788 TSC_hg19_v1_chr1_-_21995851 NM_001145657 NM_002885	-34149	-	BC054490 TSC_hg19_v1_chr1_-_21978334 NM_001145658	-51635	-	AB003930 TSC_hg19_v1_chr1_-_21949064	-80945	-	CU679968 AB384973 AK315005 BC104896 BC143343 BC143349 BC143354 TSC_hg19_v1_chr1_-_22109586 AK074247 AF502942 BC011576	79543	-	TSC_hg19_v1_chr1_-_22109643 BC103724 BC067261	79652	-	TSC_hg19_v1_chr1_-_22109701 AK026930 NM_001032730 NM_032236	79717	-	AB007943|RAP1GAP|5909|RAP1 GTPase activating protein##M64788|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145657|RAP1GAP|5909|RAP1 GTPase activating protein##NM_002885|RAP1GAP|5909|RAP1 GTPase activating protein##BC054490|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145658|RAP1GAP|5909|RAP1 GTPase activating protein##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein##AK315005|USP48|84196|ubiquitin specific peptidase 48##BC104896|USP48|84196|ubiquitin specific peptidase 48##BC143343|USP48|84196|ubiquitin specific peptidase 48##BC143349|USP48|84196|ubiquitin specific peptidase 48##BC143354|USP48|84196|ubiquitin specific peptidase 48##AK074247|USP48|84196|ubiquitin specific peptidase 48##AF502942|USP48|84196|ubiquitin specific peptidase 48##BC011576|USP48|84196|ubiquitin specific peptidase 48##BC103724|USP48|84196|ubiquitin specific peptidase 48##BC067261|USP48|84196|ubiquitin specific peptidase 48##NM_001032730|USP48|84196|ubiquitin specific peptidase 48##NM_032236|USP48|84196|ubiquitin specific peptidase 48	0.146259	
chr20	954470	954607	reg1021846.p1	6.661	+	AB527108 AF113708 BC111976 BC111978 AF074332 NM_015985 AK304756	-57622	-	NM_031424 BC022238 AB196290 DQ431181	-129173	+	BC004222 NM_207121	-137828	+	AB528812 AK122609 DQ355152 NM_001029871 NM_001040007 TSC_hg19_v1_chr20_-_983029	28379	-	AK302164 NM_178578 BC126127 BC126462	139422	+	TSC_hg19_v1_chr20_+_1099244 NM_006814 AK098612 AK294134 D88378 AB590890 HQ258165 AK300667	144815	+	AF113708|ANGPT4|51378|angiopoietin 4##BC111976|ANGPT4|51378|angiopoietin 4##BC111978|ANGPT4|51378|angiopoietin 4##AF074332|ANGPT4|51378|angiopoietin 4##NM_015985|ANGPT4|51378|angiopoietin 4##AK304756|ANGPT4|51378|angiopoietin 4##NM_031424|FAM110A|83541|family with sequence similarity 110, member A##BC022238|FAM110A|83541|family with sequence similarity 110, member A##AB196290|FAM110A|83541|family with sequence similarity 110, member A##DQ431181|FAM110A|83541|family with sequence similarity 110, member A##BC004222|FAM110A|83541|family with sequence similarity 110, member A##NM_207121|FAM110A|83541|family with sequence similarity 110, member A##AK122609|RSPO4|343637|R-spondin 4##DQ355152|RSPO4|343637|R-spondin 4##NM_001029871|RSPO4|343637|R-spondin 4##NM_001040007|RSPO4|343637|R-spondin 4##AK302164|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##NM_178578|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##BC126127|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##BC126462|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##NM_006814|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK098612|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK294134|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##D88378|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##HQ258165|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK300667|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)	0.044894	
chr19	46520222	46520321	reg1021063.p2	6.660	+	TSC_hg19_v1_chr19_+_46498724 GQ375050	-21544	+	NM_001080402	-21933	+	TSC_hg19_v1_chr19_-_46476556 U70477 AF083898 NM_002516	-43665	-	NM_005091	6284	-	AY672114 NM_001002923	24002	-	HQ258051 BC130593 BC130597 AY358434 AY672113 NM_207393	107650	-	GQ375050|CCDC61|729440|coiled-coil domain containing 61##NM_001080402|CCDC61|729440|coiled-coil domain containing 61##U70477|NOVA2|4858|neuro-oncological ventral antigen 2##AF083898|NOVA2|4858|neuro-oncological ventral antigen 2##NM_002516|NOVA2|4858|neuro-oncological ventral antigen 2##NM_005091|PGLYRP1|8993|peptidoglycan recognition protein 1##AY672114|IGFL4|444882|IGF-like family member 4##NM_001002923|IGFL4|444882|IGF-like family member 4##HQ258051|IGFL3|388555|IGF-like family member 3##BC130593|IGFL3|388555|IGF-like family member 3##BC130597|IGFL3|388555|IGF-like family member 3##AY358434|IGFL3|388555|IGF-like family member 3##AY672113|IGFL3|388555|IGF-like family member 3##NM_207393|IGFL3|388555|IGF-like family member 3	0.95896	CTCF.p2:-25:0.929
chr3	66988909	66989036	reg1021994.p1	6.660	+	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	-437508	-	AF381545 BC140907 NM_015541 AY730707	-438120	-	TSC_hg19_v1_chr3_+_66444897 AB075504	-544013	+	NM_032505 AK096640 AK300397	59756	+	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	716090	-	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	716178	+	AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit	0.996349	CTCF.p2:2:0.996
chr11	18874986	18875100	reg1021116.p1	6.659	+	AK294374 BC064807 AK316270 AK294673 BC039897 AK295604 AK090923 AX746685 AL832541 NM_001039970 NM_006906 NM_032781 TSC_hg19_v1_chr11_-_18813404	-61778	-	BC115396 BC115397 AK095113 NM_173588	-127296	-	TSC_hg19_v1_chr11_+_18720347 BC035692 NM_153347	-154695	+	BC096835 NM_147199	81503	-	BC063450 NM_054030	207184	-	TSC_hg19_v1_chr11_+_19138714 BC050690 BC056152 NM_001001483 NM_019028 AB097014 AB097027 AK001714 BX648156 BC036020 AK291348 AB024495 CU691124	263674	+	AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC115396|IGSF22|283284|immunoglobulin superfamily, member 22##BC115397|IGSF22|283284|immunoglobulin superfamily, member 22##AK095113|IGSF22|283284|immunoglobulin superfamily, member 22##NM_173588|IGSF22|283284|immunoglobulin superfamily, member 22##BC035692|TMEM86A|144110|transmembrane protein 86A##NM_153347|TMEM86A|144110|transmembrane protein 86A##BC096835|MRGPRX1|259249|MAS-related GPR, member X1##NM_147199|MRGPRX1|259249|MAS-related GPR, member X1##BC063450|MRGPRX2|117194|MAS-related GPR, member X2##NM_054030|MRGPRX2|117194|MAS-related GPR, member X2##BC050690|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BC056152|ZDHHC13|54503|zinc finger, DHHC-type containing 13##NM_001001483|ZDHHC13|54503|zinc finger, DHHC-type containing 13##NM_019028|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB097014|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB097027|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AK001714|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BX648156|ZDHHC13|54503|zinc finger, DHHC-type containing 13##BC036020|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AK291348|ZDHHC13|54503|zinc finger, DHHC-type containing 13##AB024495|ZDHHC13|54503|zinc finger, DHHC-type containing 13	0.948553	CTCF.p2:24:0.949
chr15	74676160	74676325	reg1019287.p1	6.659	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-16239	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-17707	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-65337	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	49787	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	50070	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	77205	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.360952	CTCF.p2:-20:0.361
chr22	37655705	37655836	reg1021763.p1	6.659	+	TSC_hg19_v1_chr22_-_37640315 AK096924 BC001485 NM_002872	-15469	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	-15549	-	BC042068 NM_001051 AK291165	-47387	-	AF125349 AF075458 NM_013385 TSC_hg19_v1_chr22_+_37678513	22698	+	TSC_hg19_v1_chr22_+_37678548 AK304453 BC017780	22767	+	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	22806	+	AK096924|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BC001485|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##NM_002872|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF125349|CYTH4|27128|cytohesin 4##AF075458|CYTH4|27128|cytohesin 4##NM_013385|CYTH4|27128|cytohesin 4##AK304453|CYTH4|27128|cytohesin 4##BC017780|CYTH4|27128|cytohesin 4##BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4	0.138355	
chr1	11771259	11771363	reg1018220.p1	6.658	+	BC111064 NM_198545 AK075558 TSC_hg19_v1_chr1_+_11751786 AY358750	-19508	+	NM_001127325 AK094316	-19620	-	TSC_hg19_v1_chr1_-_11741180 AK027327 AF139365 AF157482 NM_006341	-30089	-	TSC_hg19_v1_chr1_+_11796132 NM_001040194 NM_001040195 NM_001040196 NM_001040197 NM_020350	24834	+	TSC_hg19_v1_chr1_+_11796198 AK290042 BC017328	24879	+	AF312374 TSC_hg19_v1_chr1_+_11796222 BC011946 AB528670 AF165187 DQ892619 DQ895859	24927	+	BC111064|C1orf187|374946|chromosome 1 open reading frame 187##NM_198545|C1orf187|374946|chromosome 1 open reading frame 187##AK075558|C1orf187|374946|chromosome 1 open reading frame 187##AY358750|C1orf187|374946|chromosome 1 open reading frame 187##NM_001127325|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##AK094316|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##AK027327|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##AF139365|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##AF157482|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##NM_006341|MAD2L2|10459|MAD2 mitotic arrest deficient-like 2 (yeast)##NM_001040194|AGTRAP|57085|angiotensin II receptor-associated protein##NM_001040195|AGTRAP|57085|angiotensin II receptor-associated protein##NM_001040196|AGTRAP|57085|angiotensin II receptor-associated protein##NM_001040197|AGTRAP|57085|angiotensin II receptor-associated protein##NM_020350|AGTRAP|57085|angiotensin II receptor-associated protein##AK290042|AGTRAP|57085|angiotensin II receptor-associated protein##BC017328|AGTRAP|57085|angiotensin II receptor-associated protein##AF312374|AGTRAP|57085|angiotensin II receptor-associated protein##BC011946|AGTRAP|57085|angiotensin II receptor-associated protein##AF165187|AGTRAP|57085|angiotensin II receptor-associated protein##DQ892619|AGTRAP|57085|angiotensin II receptor-associated protein##DQ895859|AGTRAP|57085|angiotensin II receptor-associated protein	0.238991	
chr15	84662496	84662602	reg1019143.p1	6.658	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-339722	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-546321	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-546489	+	NM_001243531	178692	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	481732	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	534923	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.972709	CTCF.p2:20:0.973
chr2	217865255	217865388	reg1024517.p1	6.658	+	BC029516 NM_003284	-140540	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-305061	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-305755	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	943460	-	AK001785 TSC_hg19_v1_chr2_-_218843551	978225	-	TSC_hg19_v1_chr2_-_218867719 AK309785	1002402	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.0	
chr2	91757903	91758031	reg1019277.p1	6.658	+	TSC_hg19_v1_chr2_+_90211706 Z69013	-1546249	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-1680213	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-2138114	-	TSC_hg19_v1_chr2_-_91847997 BC030764	90036	-	AK097438 BC021716 NM_144705 AK296678 CU692394	3779283	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	3933515	+	BC070334|IGKC|3514|immunoglobulin kappa constant##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein	0.933043	CTCF.p2:-27:0.933
chr10	116310582	116310721	reg1018485.p2	6.657	+	TSC_hg19_v1_chr10_-_116286673 CR749819 NM_006720 AK098277	-23972	-	TSC_hg19_v1_chr10_-_116286631 AK298709 BC002448	-24049	-	CU677968 TSC_hg19_v1_chr10_-_116251632	-59044	-	AK297344 TSC_hg19_v1_chr10_-_116392101	81449	-	AF005654 NM_002313	107405	-	AB462929 TSC_hg19_v1_chr10_-_116444183 D31883	133512	-	CR749819|ABLIM1|3983|actin binding LIM protein 1##NM_006720|ABLIM1|3983|actin binding LIM protein 1##AK098277|ABLIM1|3983|actin binding LIM protein 1##AK298709|ABLIM1|3983|actin binding LIM protein 1##BC002448|ABLIM1|3983|actin binding LIM protein 1##AK297344|ABLIM1|3983|actin binding LIM protein 1##AF005654|ABLIM1|3983|actin binding LIM protein 1##NM_002313|ABLIM1|3983|actin binding LIM protein 1##D31883|ABLIM1|3983|actin binding LIM protein 1	0.999076	CTCF.p2:-36:0.999
chr1	179220983	179221106	reg1020666.p1	6.657	+	TSC_hg19_v1_chr1_-_179198815 AK311045 NM_001136001 NM_001168236 NM_001168237 NM_001168238 NM_007314	-22225	-	M35296 TSC_hg19_v1_chr1_-_179198813	-22270	-	FJ542283 BC065912 AK225255 TSC_hg19_v1_chr1_-_179112210 AK309549 NM_001136000 NM_001168239 NM_005158	-108844	-	NM_001252511 NM_001252512 NM_003101 TSC_hg19_v1_chr1_+_179262876	41822	+	TSC_hg19_v1_chr1_+_179262931 AK300551 AK290659 AK294047	41865	+	AK026611 TSC_hg19_v1_chr1_+_179262936 AL833625	41899	+	AK311045|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001136001|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168236|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168237|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168238|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_007314|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##M35296|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001252511|SOAT1|6646|sterol O-acyltransferase 1##NM_001252512|SOAT1|6646|sterol O-acyltransferase 1##NM_003101|SOAT1|6646|sterol O-acyltransferase 1##AK300551|SOAT1|6646|sterol O-acyltransferase 1##AK290659|SOAT1|6646|sterol O-acyltransferase 1##AK294047|SOAT1|6646|sterol O-acyltransferase 1##AK026611|SOAT1|6646|sterol O-acyltransferase 1##AL833625|SOAT1|6646|sterol O-acyltransferase 1	0.0	
chr13	52355521	52355659	reg1022577.p1	6.657	+	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-196855	+	TSC_hg19_v1_chr13_+_52158639 BC014004	-196949	+	AK309815 TSC_hg19_v1_chr13_+_52158630	-196957	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	22685	-	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	80604	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	229960	-	AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##BC014004|WDFY2|115825|WD repeat and FYVE domain containing 2##AK309815|WDFY2|115825|WD repeat and FYVE domain containing 2##BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide	0.046334	
chr22	38302151	38302288	reg1022202.p1	6.657	+	TSC_hg19_v1_chr22_+_38302165 NM_033386	-90	+	AL357455 CU674548 CU688616 TSC_hg19_v1_chr22_+_38245452 DQ891842 DQ893595 DQ895030 EU176311 AK093540 AX748192	-56751	+	AK298776 TSC_hg19_v1_chr22_+_38245447 AF077207	-56771	+	TSC_hg19_v1_chr22_+_38302345 AJ496196 CR456437 AB463117 BC142605 BC143050 CU013036 CU013324 AL834373	179	+	CR456440 BC031998 AK057349 NM_032561 NM_001207062	47385	-	TSC_hg19_v1_chr22_+_38349705 NM_021974 BC003582 AK094034 AK311128 AK311831 AX748424 CR456546 CU013146 CU013434 AB463187 CR457021	47513	+	NM_033386|MICALL1|85377|MICAL-like 1##AL357455|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ891842|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ893595|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ895030|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##EU176311|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##AK093540|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##AK298776|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##AF077207|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##AJ496196|MICALL1|85377|MICAL-like 1##CR456437|MICALL1|85377|MICAL-like 1##BC142605|MICALL1|85377|MICAL-like 1##BC143050|MICALL1|85377|MICAL-like 1##AL834373|MICALL1|85377|MICAL-like 1##CR456440|C22orf23|84645|chromosome 22 open reading frame 23##BC031998|C22orf23|84645|chromosome 22 open reading frame 23##AK057349|C22orf23|84645|chromosome 22 open reading frame 23##NM_032561|C22orf23|84645|chromosome 22 open reading frame 23##NM_001207062|C22orf23|84645|chromosome 22 open reading frame 23##NM_021974|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##BC003582|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK094034|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK311128|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK311831|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CR456546|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CU013146|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CU013434|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CR457021|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F	0.0	
chr6_mann_hap4	2755402	2755494	reg1020492.p1	6.657	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.778879	CTCF.p2:15:0.779
chr1	120018573	120018687	reg1018460.p1	6.656	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	-60869	+	NM_001166120	-61077	+	TSC_hg19_v1_chr1_+_119911431 AK298289 NM_001005783 NM_016527 BC020863 AF231917 AF203975 AY513277	-107186	+	NM_000862 S45679 AK291556 BC031999 M35493 X53321 M27137 DQ891161 DQ894342 CU689258 X55997	31332	+	NM_001080470	171759	-	NM_006623 AK315360 BC011262 TSC_hg19_v1_chr1_+_120254558 AK309662 AK310132 AF171237 BC000303 BC001349 BC023235 DQ892073 EU176546 AB528378 CR456795	235901	+	NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)##BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_000862|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##S45679|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##AK291556|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##BC031999|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M35493|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X53321|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M27137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ891161|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ894342|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X55997|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##NM_001080470|ZNF697|90874|zinc finger protein 697##NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase##AK315360|PHGDH|26227|phosphoglycerate dehydrogenase##BC011262|PHGDH|26227|phosphoglycerate dehydrogenase##AK309662|PHGDH|26227|phosphoglycerate dehydrogenase##AK310132|PHGDH|26227|phosphoglycerate dehydrogenase##AF171237|PHGDH|26227|phosphoglycerate dehydrogenase##BC000303|PHGDH|26227|phosphoglycerate dehydrogenase##BC001349|PHGDH|26227|phosphoglycerate dehydrogenase##BC023235|PHGDH|26227|phosphoglycerate dehydrogenase##DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase##EU176546|PHGDH|26227|phosphoglycerate dehydrogenase##CR456795|PHGDH|26227|phosphoglycerate dehydrogenase	0.0	
chr11	76631021	76631152	reg1016706.p2	6.656	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	-59093	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	-59154	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	-136809	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	114373	+	TSC_hg19_v1_chr11_+_76778017 BC018123 NM_004055 AK128124 AK313132 AK310978 AK094150 AB209087	146941	+	CU686775 BC069115 BC069365 NM_006189	182798	+	AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC018123|CAPN5|726|calpain 5##NM_004055|CAPN5|726|calpain 5##AK128124|CAPN5|726|calpain 5##AK313132|CAPN5|726|calpain 5##AK310978|CAPN5|726|calpain 5##AK094150|CAPN5|726|calpain 5##AB209087|CAPN5|726|calpain 5##BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein	0.780967	CTCF.p2:-3:0.781
chr3	134359887	134360001	reg1019906.p1	6.656	+	AK023448 BC068997 TSC_hg19_v1_chr3_+_134205041 NM_025180 AK056465	-154920	+	TSC_hg19_v1_chr3_+_134204899 NM_001042400	-155060	+	BX537696 TSC_hg19_v1_chr3_-_134204864 NM_015391 AK001285 NM_001242374	-155076	-	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	9901	-	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	154207	+	TSC_hg19_v1_chr3_+_134514301 BC111744	154357	+	AK023448|CEP63|80254|centrosomal protein 63kDa##BC068997|CEP63|80254|centrosomal protein 63kDa##NM_025180|CEP63|80254|centrosomal protein 63kDa##AK056465|CEP63|80254|centrosomal protein 63kDa##NM_001042400|CEP63|80254|centrosomal protein 63kDa##BX537696|ANAPC13|25847|anaphase promoting complex subunit 13##NM_015391|ANAPC13|25847|anaphase promoting complex subunit 13##AK001285|ANAPC13|25847|anaphase promoting complex subunit 13##NM_001242374|ANAPC13|25847|anaphase promoting complex subunit 13##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC111744|EPHB1|2047|EPH receptor B1	0.934128	CTCF.p2:10:0.934
chr3	94581684	94581794	reg1022238.p2	6.656	+	AK122674 NM_001195643	-799673	-	TSC_hg19_v1_chr3_+_93781863 AF169972 BC018432 BC020602 BC057238 NM_022072 AK026262	-799895	+	BC045541 TSC_hg19_v1_chr3_-_93781761 AL832912 BC063379 NM_176815	-799995	-	NM_001080448 TSC_hg19_v1_chr3_+_96533435 AK092565 AX747601	1951691	+	AK302040 AK310249 BC031881 BC067287 AK302080 AL133666 NM_173655	2576732	+	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	2901861	+	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1##AF169972|NSUN3|63899|NOP2/Sun domain family, member 3##BC018432|NSUN3|63899|NOP2/Sun domain family, member 3##BC020602|NSUN3|63899|NOP2/Sun domain family, member 3##BC057238|NSUN3|63899|NOP2/Sun domain family, member 3##NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3##AK026262|NSUN3|63899|NOP2/Sun domain family, member 3##BC045541|DHFRL1|200895|dihydrofolate reductase-like 1##AL832912|DHFRL1|200895|dihydrofolate reductase-like 1##BC063379|DHFRL1|200895|dihydrofolate reductase-like 1##NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001080448|EPHA6|285220|EPH receptor A6##AK092565|EPHA6|285220|EPH receptor A6##AK302040|EPHA6|285220|EPH receptor A6##AK310249|EPHA6|285220|EPH receptor A6##BC031881|EPHA6|285220|EPH receptor A6##BC067287|EPHA6|285220|EPH receptor A6##AK302080|EPHA6|285220|EPH receptor A6##AL133666|EPHA6|285220|EPH receptor A6##NM_173655|EPHA6|285220|EPH receptor A6##BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6	0.988056	CTCF.p2:-6:0.988
chr18	63791802	63791906	reg1019665.p1	6.655	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-373652	+	TSC_hg19_v1_chr18_+_63417845 BC036786	-373988	+	AJ007611 NM_033646	-374367	+	AJ007607 NM_021153 AK304000 AK315257 BC015877	479457	-	AK021849 TSC_hg19_v1_chr18_-_65182656	1390729	-	TSC_hg19_v1_chr18_-_65183956 NM_032160	1392092	-	AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AK021849|DSEL|92126|dermatan sulfate epimerase-like##NM_032160|DSEL|92126|dermatan sulfate epimerase-like	0.0	
chr19	50668851	50668960	reg1015955.p1	6.655	+	DQ890967 DQ894140 AK307321 BC029535 AY358196 AB590459 AK131024 NM_152358	-2497	-	TSC_hg19_v1_chr19_+_50529309 AK292452	-139582	+	TSC_hg19_v1_chr19_+_50529276 AK302293 BC018612 BX648093	-139621	+	TSC_hg19_v1_chr19_+_50691445 AK125082	22536	+	TSC_hg19_v1_chr19_+_50706878 AY165122 BC129803 NM_001077186 NM_001145809 NM_024729 AK307783 AB290169	37986	+	BC018933 TSC_hg19_v1_chr19_+_50713879	44946	+	DQ890967|IZUMO2|126123|IZUMO family member 2##DQ894140|IZUMO2|126123|IZUMO family member 2##AK307321|IZUMO2|126123|IZUMO family member 2##BC029535|IZUMO2|126123|IZUMO family member 2##AY358196|IZUMO2|126123|IZUMO family member 2##AK131024|IZUMO2|126123|IZUMO family member 2##NM_152358|IZUMO2|126123|IZUMO family member 2##AK292452|ZNF473|25888|zinc finger protein 473##AK302293|ZNF473|25888|zinc finger protein 473##BC018612|ZNF473|25888|zinc finger protein 473##BX648093|ZNF473|25888|zinc finger protein 473##AK125082|MYH14|79784|myosin, heavy chain 14, non-muscle##AY165122|MYH14|79784|myosin, heavy chain 14, non-muscle##BC129803|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_001077186|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_001145809|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_024729|MYH14|79784|myosin, heavy chain 14, non-muscle##AK307783|MYH14|79784|myosin, heavy chain 14, non-muscle##AB290169|MYH14|79784|myosin, heavy chain 14, non-muscle##BC018933|MYH14|79784|myosin, heavy chain 14, non-muscle	0.258354	CTCF.p2:-59:0.258
chr3	134964970	134965132	reg1021949.p1	6.655	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-450750	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-450900	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-595206	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	719480	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	719569	+	NM_181897 AK316258 L12146	776567	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.745511	CTCF.p2:13:0.746
chr6	74225465	74225595	reg1022048.p1	6.655	+	AL833823 TSC_hg19_v1_chr6_+_74171681	-53874	+	NM_001123226 NM_012123 NM_133645 TSC_hg19_v1_chr6_+_74171505 AK225828 AK074625 AF319422 AF469110 AF469111 AY078985 AY078986 BC005808 BC011051 AJ420530 AF132937	-54023	+	TSC_hg19_v1_chr6_-_74162038 NM_138441	-63472	-	AK222519 BC020477 DQ867534 AF328730 AF397403 TSC_hg19_v1_chr6_-_74229235	3639	-	TSC_hg19_v1_chr6_-_74230163 AY043301	4640	-	BC012891 BC010735 BC071619 BC082268 BC071741 BC008587 BC018150 BC018641 BC019669 BC029997 BC038339 BC072385 BC014224 BC018850 BC009875 BC035877 BC111051 X03558 AK315827 TSC_hg19_v1_chr6_-_74230757 AK223030 AK024888 AK222551 AK223046 AK297878 AK300922 BC021686 BC070131 AK026650 AK055058 AK058051 AK058082 AK098510 AK098518 AK098623 AK127384 AK222515 AK222523 AK222982 AK289374 AK289442 AK290691 AK304214 BC028674 BC066893 BC066894 BC070500 D28375 NM_001402	5216	-	AL833823|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##NM_001123226|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##NM_012123|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##NM_133645|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##AK225828|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##AK074625|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##AF319422|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##AF469110|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##AF469111|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##AY078985|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##AY078986|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##BC005808|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##BC011051|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##AJ420530|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##AF132937|MTO1|25821|mitochondrial translation optimization 1 homolog (S. cerevisiae)##NM_138441|MB21D1|115004|Mab-21 domain containing 1##AK222519|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC020477|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##DQ867534|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AF328730|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AF397403|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AY043301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC012891|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC010735|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC071619|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC082268|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC071741|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC008587|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018150|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018641|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC019669|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC029997|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC038339|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC072385|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC014224|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018850|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC009875|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC035877|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC111051|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##X03558|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK315827|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK223030|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK024888|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222551|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK223046|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK297878|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK300922|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC021686|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC070131|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK026650|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK055058|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK058051|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK058082|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098510|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098518|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098623|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK127384|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222515|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222523|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222982|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK289374|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK289442|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK290691|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK304214|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC028674|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC066893|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC066894|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##NM_001402|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1	0.965427	CTCF.p2:-3:0.965
chr10	11184885	11185065	reg1021372.p1	6.654	+	U69546 TSC_hg19_v1_chr10_+_11060121	-124859	+	AF090694 TSC_hg19_v1_chr10_+_11060072	-124904	+	TSC_hg19_v1_chr10_+_11059882 AK314087 NM_006561 BC036391	-125085	+	AK299983 NM_001025076 NM_001083591 TSC_hg19_v1_chr10_+_11207008	21994	+	AK297313 TSC_hg19_v1_chr10_+_11207057 AK299992 AF036956 AK293164 AF432906	22121	+	TSC_hg19_v1_chr10_+_11207244 AK316354	22270	+	U69546|CELF2|10659|CUGBP, Elav-like family member 2##AF090694|CELF2|10659|CUGBP, Elav-like family member 2##AK314087|CELF2|10659|CUGBP, Elav-like family member 2##NM_006561|CELF2|10659|CUGBP, Elav-like family member 2##BC036391|CELF2|10659|CUGBP, Elav-like family member 2##AK299983|CELF2|10659|CUGBP, Elav-like family member 2##NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2##NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2##AK297313|CELF2|10659|CUGBP, Elav-like family member 2##AK299992|CELF2|10659|CUGBP, Elav-like family member 2##AF036956|CELF2|10659|CUGBP, Elav-like family member 2##AK293164|CELF2|10659|CUGBP, Elav-like family member 2##AF432906|CELF2|10659|CUGBP, Elav-like family member 2##AK316354|CELF2|10659|CUGBP, Elav-like family member 2	0.141307	
chr2	74734394	74734498	reg1020340.p2	6.654	+	BC144442 TSC_hg19_v1_chr2_-_74730470 AY305861 NM_001009812	-4036	-	TSC_hg19_v1_chr2_+_74730272 BC009264 AK096725	-4163	+	TSC_hg19_v1_chr2_+_74729717 AK125271	-4697	+	AF087884 TSC_hg19_v1_chr2_-_74734518	62	-	BC004952 NM_032673	356	-	TSC_hg19_v1_chr2_+_74740585 AB593086 BC018611	6205	+	AY305861|LBX2|85474|ladybird homeobox 2##NM_001009812|LBX2|85474|ladybird homeobox 2##BC009264|LOC151534|151534|uncharacterized LOC151534##AK096725|LOC151534|151534|uncharacterized LOC151534##AK125271|LOC151534|151534|uncharacterized LOC151534##AF087884|PCGF1|84759|polycomb group ring finger 1##BC004952|PCGF1|84759|polycomb group ring finger 1##NM_032673|PCGF1|84759|polycomb group ring finger 1##BC018611|TLX2|3196|T-cell leukemia homeobox 2	1.063921	CTCF.p2:-4:0.917
chr8	103819836	103819966	reg1019976.p2	6.654	+	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	-151969	-	BC011538 NM_001032282 S81439	-153809	-	NM_024410 AK315276 BC104456 BC104457	-256040	+	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	56458	-	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	56494	-	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	213366	+	AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1##BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1	0.352277	CTCF.p2:8:0.352
chrY	13622591	13622704	reg1019672.p2	6.654	+	BC121113 BC121114 NM_001077697 U58096 BC075016 AY130858 M98525	-4257111	+	BC121113 NM_001197242 NM_003308 U58096 AK093413 AX748111 AY130858 M98525	-4318036	+	BC121113 BC121114 NM_001077697 U58096 BC075016 AK093413 AX748111 AY130858 NM_001164471 M94893 M98525	-4386570	+	TSC_hg19_v1_chrY_+_14774204 AL080135	1151602	+	AF000986 NM_004654	1190512	+	BC034942 NM_001122665	1393371	+	BC121113|TSPY1|7258|testis specific protein, Y-linked 1##BC121114|TSPY3|728137|testis specific protein, Y-linked 3##NM_001077697|TSPY3|728137|testis specific protein, Y-linked 3##U58096|TSPY1|7258|testis specific protein, Y-linked 1##BC075016|TSPY3|728137|testis specific protein, Y-linked 3##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##M98525|TSPY1|7258|testis specific protein, Y-linked 1##BC121113|TSPY1|7258|testis specific protein, Y-linked 1##NM_001197242|TSPY1|7258|testis specific protein, Y-linked 1##NM_003308|TSPY1|7258|testis specific protein, Y-linked 1##U58096|TSPY1|7258|testis specific protein, Y-linked 1##AK093413|TSPY4|728395|testis specific protein, Y-linked 4##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##M98525|TSPY1|7258|testis specific protein, Y-linked 1##BC121113|TSPY1|7258|testis specific protein, Y-linked 1##BC121114|TSPY3|728137|testis specific protein, Y-linked 3##NM_001077697|TSPY3|728137|testis specific protein, Y-linked 3##U58096|TSPY1|7258|testis specific protein, Y-linked 1##BC075016|TSPY3|728137|testis specific protein, Y-linked 3##AK093413|TSPY4|728395|testis specific protein, Y-linked 4##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##NM_001164471|TSPY4|728395|testis specific protein, Y-linked 4##M94893|TSPY1|7258|testis specific protein, Y-linked 1##M98525|TSPY1|7258|testis specific protein, Y-linked 1##AL080135|TTTY15|64595|testis-specific transcript, Y-linked 15 (non-protein coding)##AF000986|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked##NM_004654|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked##BC034942|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked##NM_001122665|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	0.802197	CTCF.p2:-8:0.802
chr1	151861580	151861700	reg1019801.p1	6.653	+	HQ258137 BC101610 BC112239 AK095283 NM_182578	-35533	-	AK293673 NM_001136003	-48608	-	AK298460 TSC_hg19_v1_chr1_-_151804275 AB307696 CR457436 DQ890805 DQ893960 BC031554 AK223137 AK315662 BC110571 U16997 NM_005060	-57354	-	TSC_hg19_v1_chr1_-_151881935 AK314852 AJ313515 BC017339	20287	-	TSC_hg19_v1_chr1_-_151881988 BC065277	20361	-	AK289494 NM_053055	20720	-	HQ258137|THEM5|284486|thioesterase superfamily member 5##BC101610|THEM5|284486|thioesterase superfamily member 5##BC112239|THEM5|284486|thioesterase superfamily member 5##AK095283|THEM5|284486|thioesterase superfamily member 5##NM_182578|THEM5|284486|thioesterase superfamily member 5##AK293673|C2CD4D|100191040|C2 calcium-dependent domain containing 4D##NM_001136003|C2CD4D|100191040|C2 calcium-dependent domain containing 4D##AK298460|RORC|6097|RAR-related orphan receptor C##AB307696|RORC|6097|RAR-related orphan receptor C##CR457436|RORC|6097|RAR-related orphan receptor C##DQ890805|RORC|6097|RAR-related orphan receptor C##DQ893960|RORC|6097|RAR-related orphan receptor C##BC031554|RORC|6097|RAR-related orphan receptor C##AK223137|RORC|6097|RAR-related orphan receptor C##AK315662|RORC|6097|RAR-related orphan receptor C##BC110571|RORC|6097|RAR-related orphan receptor C##U16997|RORC|6097|RAR-related orphan receptor C##NM_005060|RORC|6097|RAR-related orphan receptor C##AK314852|THEM4|117145|thioesterase superfamily member 4##AJ313515|THEM4|117145|thioesterase superfamily member 4##BC017339|THEM4|117145|thioesterase superfamily member 4##BC065277|THEM4|117145|thioesterase superfamily member 4##AK289494|THEM4|117145|thioesterase superfamily member 4##NM_053055|THEM4|117145|thioesterase superfamily member 4	0.336455	CTCF.p2:-7:0.336
chr1	153165327	153165408	reg1016639.p1	6.653	+	BC130455 BC133041 NM_001014291	-41941	-	BC096108 BC096109 BC096110 BC096111 NM_001014450	-79392	-	M20030 NM_001024209	-98367	-	NM_001010857 BC130507 BC130511 BC087854	10574	+	NM_001195571	24692	+	BC108290 NM_000427	66811	+	BC130455|SPRR2G|6706|small proline-rich protein 2G##BC133041|SPRR2G|6706|small proline-rich protein 2G##NM_001014291|SPRR2G|6706|small proline-rich protein 2G##BC096108|SPRR2A|6700|small proline-rich protein 2A##BC096109|SPRR2A|6700|small proline-rich protein 2A##BC096110|SPRR2A|6700|small proline-rich protein 2A##BC096111|SPRR2A|6700|small proline-rich protein 2A##NM_001014450|SPRR2F|6705|small proline-rich protein 2F##M20030|SPRR2E|6704|small proline-rich protein 2E##NM_001024209|SPRR2E|6704|small proline-rich protein 2E##NM_001010857|LELP1|149018|late cornified envelope-like proline-rich 1##BC130507|LELP1|149018|late cornified envelope-like proline-rich 1##BC130511|LELP1|149018|late cornified envelope-like proline-rich 1##BC087854|LELP1|149018|late cornified envelope-like proline-rich 1##NM_001195571|PRR9|574414|proline rich 9##BC108290|LOR|4014|loricrin##NM_000427|LOR|4014|loricrin	0.06256	
chr1	66748126	66748266	reg1021316.p2	6.653	+	AB209081 NM_001037340 AK290006	-289793	+	AK289969 NM_002600 L20966	-489337	+	NM_001037341 CR749667 BC071607 BC036108	-490001	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	49657	+	TSC_hg19_v1_chr1_+_66798096 AK294441	49899	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	251688	+	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK289969|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_002600|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L20966|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037341|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##CR749667|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC071607|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC036108|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	0.541937	CTCF.p2:0:0.542
chr6	121147524	121147636	reg1020587.p1	6.653	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-1476659	-	BX538186 AK091682 AX747126 NM_001100411	-1677234	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-1747672	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	508063	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	609245	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	1573115	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.938514	CTCF.p2:10:0.939
chr6	137982885	137983006	reg1021992.p1	6.653	+	BC051352 AK096362 NM_175747	-167420	-	TSC_hg19_v1_chr6_-_137540556 NM_000416	-442387	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-442400	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	205592	+	TSC_hg19_v1_chr6_-_138189314 AK124173	206405	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	445623	-	BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector	0.989279	CTCF.p2:6:0.989
chr11	57524496	57524591	reg1019189.p1	6.652	+	NM_001145101	-5291	-	TSC_hg19_v1_chr11_+_57508992 BC021122	-15543	+	NM_170746 BC111087 AF536829 AJ276250 TSC_hg19_v1_chr11_+_57508954 AJ276249 BC064570	-15691	+	NM_001085458 NM_001085459 NM_001085460 NM_001085461 NM_001085462 NM_001085463 NM_001085464 NM_001085465 NM_001085466 NM_001085467 NM_001085468 NM_001085469 NM_001206883 NM_001206884 NM_001206885 NM_001206886 NM_001206887 NM_001206888 NM_001206889 NM_001206890 NM_001206891 NM_001331 TSC_hg19_v1_chr11_+_57529331 AF062317 AF062318 AF062319 AF062320 AF062321 AF062322 AF062323 AF062324 AF062325 AF062326 AF062327 AF062328 AF062329 AF062330 AF062331 AF062332 AF062333 AF062334 AF062335 AF062336 AF062337 AF062338 AF062339 AF062340 AF062341 AF062342 AF062343 AF062344 BC075795	4796	+	BC110819 NM_001005212	266809	+	BC151146 BC151147 NM_001005186	273869	+	NM_001145101|BTBD18|643376|BTB (POZ) domain containing 18##BC021122|C11orf31|280636|chromosome 11 open reading frame 31##NM_170746|C11orf31|280636|chromosome 11 open reading frame 31##AF536829|C11orf31|280636|chromosome 11 open reading frame 31##AJ276250|C11orf31|280636|chromosome 11 open reading frame 31##AJ276249|C11orf31|280636|chromosome 11 open reading frame 31##BC064570|C11orf31|280636|chromosome 11 open reading frame 31##NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206883|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206884|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206885|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206886|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206887|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206888|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206889|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206890|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206891|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1##BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1##BC110819|OR9Q1|219956|olfactory receptor, family 9, subfamily Q, member 1##NM_001005212|OR9Q1|219956|olfactory receptor, family 9, subfamily Q, member 1##BC151146|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##BC151147|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##NM_001005186|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1	0.989648	CTCF.p2:-4:0.990
chr13	25571634	25571780	reg1021066.p2	6.652	+	TSC_hg19_v1_chr13_-_25497054 NM_018451	-74638	-	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	-74738	-	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	-233388	+	NM_030979 AL136900 AK313336 BC045608 BC027617 AF132026 DQ892103 DQ895297	98598	+	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	173953	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	174110	-	NM_018451|CENPJ|55835|centromere protein J##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##NM_030979|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AL136900|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK313336|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC045608|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC027617|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AF132026|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ892103|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ895297|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A	0.046822	
chr5	91854103	91854270	reg1020312.p1	6.652	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-1175054	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-1178024	+	AK091866 TSC_hg19_v1_chr5_-_90610220	-1243941	-	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	1062777	-	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	1064797	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	1066482	+	BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	0.0	
chrX	117735576	117735685	reg1019437.p1	6.652	+	AY692226 NM_144658 TSC_hg19_v1_chrX_+_117629874	-105758	+	TSC_hg19_v1_chrX_+_117526665 AL834210	-208943	+	TSC_hg19_v1_chrX_+_117480490 AM393332 AM393787 EU831942 EU832037 AK304432	-255168	+	TSC_hg19_v1_chrX_+_117861562 BC015768 NM_001560 Y10659 U81379 U81380 AK313467 Y09328 BC009960 AB528371 DQ893454 DQ896296 AB209849	125937	+	TSC_hg19_v1_chrX_+_117957786 AK122676 BC036572 BC031241 BC057841 NM_173798 BC018066	222192	+	TSC_hg19_v1_chrX_+_118108580 AK091777 AK290198 AX747177	372950	+	AY692226|DOCK11|139818|dedicator of cytokinesis 11##NM_144658|DOCK11|139818|dedicator of cytokinesis 11##AL834210|WDR44|54521|WD repeat domain 44##AM393332|WDR44|54521|WD repeat domain 44##AM393787|WDR44|54521|WD repeat domain 44##EU831942|WDR44|54521|WD repeat domain 44##EU832037|WDR44|54521|WD repeat domain 44##AK304432|WDR44|54521|WD repeat domain 44##BC015768|IL13RA1|3597|interleukin 13 receptor, alpha 1##NM_001560|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y10659|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81379|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81380|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK313467|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y09328|IL13RA1|3597|interleukin 13 receptor, alpha 1##BC009960|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ893454|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ896296|IL13RA1|3597|interleukin 13 receptor, alpha 1##AB209849|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK122676|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC036572|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC031241|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC057841|ZCCHC12|170261|zinc finger, CCHC domain containing 12##NM_173798|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC018066|ZCCHC12|170261|zinc finger, CCHC domain containing 12##AK091777|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK290198|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3	0.575144	CTCF.p2:19:0.575
chr10	7459151	7459277	reg1021179.p1	6.650	+	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	-5780	-	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	-7964	-	TSC_hg19_v1_chr10_+_6622460 AY007155	-836734	+	AK027849 TSC_hg19_v1_chr10_-_7659249	200003	-	BC004282 NM_032817	202410	-	AK027831 AB075833 TSC_hg19_v1_chr10_-_7682819	223566	-	BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##AY007155|LOC439949|439949|uncharacterized LOC439949##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC004282|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_032817|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK027831|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AB075833|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.998768	CTCF.p2:14:0.999
chr14	71570740	71570854	reg1021906.p1	6.650	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-196346	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-196664	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-294988	-	AF090989 AF090990 NM_015556	425244	+	AK294895 NM_001204423	828019	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	828356	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.399897	CTCF.p2:-15:0.400
chr5	139525487	139525602	reg1019834.p1	6.650	+	BC041380 NM_001007189	-20025	+	TSC_hg19_v1_chr5_+_139493703 M96684 NM_005859 BC110574 BC110594 BC036087 AB464679 BT019388	-31817	+	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	-102699	-	TSC_hg19_v1_chr5_+_139554672 NM_032412	29110	+	TSC_hg19_v1_chr5_+_139554722 BC023982 BC013643 AK225992 AK311640 AK312045 AJ245877	29227	+	AB464063 TSC_hg19_v1_chr5_-_139682672	157120	-	BC041380|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##NM_001007189|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##M96684|PURA|5813|purine-rich element binding protein A##NM_005859|PURA|5813|purine-rich element binding protein A##BC110574|PURA|5813|purine-rich element binding protein A##BC110594|PURA|5813|purine-rich element binding protein A##BC036087|PURA|5813|purine-rich element binding protein A##BT019388|PURA|5813|purine-rich element binding protein A##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2##NM_032412|C5orf32|84418|chromosome 5 open reading frame 32##BC023982|C5orf32|84418|chromosome 5 open reading frame 32##BC013643|C5orf32|84418|chromosome 5 open reading frame 32##AK225992|C5orf32|84418|chromosome 5 open reading frame 32##AK312045|C5orf32|84418|chromosome 5 open reading frame 32##AJ245877|C5orf32|84418|chromosome 5 open reading frame 32	0.229812	CTCF.p2:15:0.230
chr15	43496652	43496743	reg1020099.p1	6.648	+	TSC_hg19_v1_chr15_+_43477636 AF082569 BC009689 AK075146 AK225645 AK290665 AK295017 AF246144 AF132034 AK225143 AB590193 CR450331 CU679441 DQ894124	-19040	+	TSC_hg19_v1_chr15_+_43477603 AK290707 AF087852	-19090	+	AK308817 TSC_hg19_v1_chr15_+_43477589 NM_012142	-19242	+	AB527822 AK297146 BC096093 BC096094 BC099627 TSC_hg19_v1_chr15_-_43513189	16409	-	TSC_hg19_v1_chr15_-_43513214 AK297663 M29399	16509	-	TSC_hg19_v1_chr15_-_43513234 M30646 M30647 NM_000119 NM_001114134	16581	-	AF082569|CCNDBP1|23582|cyclin D-type binding-protein 1##BC009689|CCNDBP1|23582|cyclin D-type binding-protein 1##AK075146|CCNDBP1|23582|cyclin D-type binding-protein 1##AK225645|CCNDBP1|23582|cyclin D-type binding-protein 1##AK290665|CCNDBP1|23582|cyclin D-type binding-protein 1##AK295017|CCNDBP1|23582|cyclin D-type binding-protein 1##AF246144|CCNDBP1|23582|cyclin D-type binding-protein 1##AF132034|CCNDBP1|23582|cyclin D-type binding-protein 1##AK225143|CCNDBP1|23582|cyclin D-type binding-protein 1##CR450331|CCNDBP1|23582|cyclin D-type binding-protein 1##DQ894124|CCNDBP1|23582|cyclin D-type binding-protein 1##AK290707|CCNDBP1|23582|cyclin D-type binding-protein 1##AF087852|CCNDBP1|23582|cyclin D-type binding-protein 1##AK308817|CCNDBP1|23582|cyclin D-type binding-protein 1##NM_012142|CCNDBP1|23582|cyclin D-type binding-protein 1##AK297146|EPB42|2038|erythrocyte membrane protein band 4.2##BC096093|EPB42|2038|erythrocyte membrane protein band 4.2##BC096094|EPB42|2038|erythrocyte membrane protein band 4.2##BC099627|EPB42|2038|erythrocyte membrane protein band 4.2##AK297663|EPB42|2038|erythrocyte membrane protein band 4.2##M29399|EPB42|2038|erythrocyte membrane protein band 4.2##M30646|EPB42|2038|erythrocyte membrane protein band 4.2##M30647|EPB42|2038|erythrocyte membrane protein band 4.2##NM_000119|EPB42|2038|erythrocyte membrane protein band 4.2##NM_001114134|EPB42|2038|erythrocyte membrane protein band 4.2	0.999536	CTCF.p2:-1:1.000
chr22	19103332	19103418	reg1019341.p1	6.648	+	TSC_hg19_v1_chr22_+_18957980 AB051434	-145369	+	BC118597 BC121809 NM_001195226 NM_016335 U79754	-179361	-	AB209472 TSC_hg19_v1_chr22_-_18923807 BC068260 BC094736 BC036534	-179644	-	CU012993 CU013281 CU691894 DQ894160 FJ032369 CR456433 L77560 X83545 TSC_hg19_v1_chr22_-_19109911 BC032430 D79985	6439	-	TSC_hg19_v1_chr22_-_19109938 BC020339 BC035425 CR936871 AK291670 AK295697 AK296337 AK304382 AK303130 BC040500 NM_001173533 NM_001173534 NM_001184781 NM_005137	6565	-	L77564 NM_053006	14945	+	AB051434|DGCR5|26220|DiGeorge syndrome critical region gene 5 (non-protein coding)##BC118597|PRODH|5625|proline dehydrogenase (oxidase) 1##BC121809|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_001195226|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_016335|PRODH|5625|proline dehydrogenase (oxidase) 1##U79754|PRODH|5625|proline dehydrogenase (oxidase) 1##AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1##BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1##BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1##BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1##CU012993|DGCR2|9993|DiGeorge syndrome critical region gene 2##CU013281|DGCR2|9993|DiGeorge syndrome critical region gene 2##DQ894160|DGCR2|9993|DiGeorge syndrome critical region gene 2##FJ032369|DGCR2|9993|DiGeorge syndrome critical region gene 2##CR456433|DGCR2|9993|DiGeorge syndrome critical region gene 2##L77560|DGCR2|9993|DiGeorge syndrome critical region gene 2##X83545|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC032430|DGCR2|9993|DiGeorge syndrome critical region gene 2##D79985|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC020339|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC035425|DGCR2|9993|DiGeorge syndrome critical region gene 2##CR936871|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK291670|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK295697|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK296337|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK304382|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK303130|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC040500|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001173533|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001173534|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001184781|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_005137|DGCR2|9993|DiGeorge syndrome critical region gene 2##L77564|TSSK2|23617|testis-specific serine kinase 2##NM_053006|TSSK2|23617|testis-specific serine kinase 2	0.216588	
chr4	89377931	89378111	reg1021766.p1	6.648	+	TSC_hg19_v1_chr4_+_89300147 AK092403 AX747525 BX647121	-77855	+	AK295832 TSC_hg19_v1_chr4_+_89300006 BC042047	-78024	+	TSC_hg19_v1_chr4_+_89299890 AF336798 AY653201 AY653202 AY653203 NM_001165136 NM_017912	-78139	+	TSC_hg19_v1_chr4_+_89378269 AY337518 NM_016323 AB027289 BC140716	301	+	TSC_hg19_v1_chr4_-_89444916 AB206972 BC007876 AK312082	66900	-	TSC_hg19_v1_chr4_-_89444931 NM_001042616 NM_032906	66931	-	AK092403|HERC6|55008|hect domain and RLD 6##BX647121|HERC6|55008|hect domain and RLD 6##AK295832|HERC6|55008|hect domain and RLD 6##BC042047|HERC6|55008|hect domain and RLD 6##AF336798|HERC6|55008|hect domain and RLD 6##AY653201|HERC6|55008|hect domain and RLD 6##AY653202|HERC6|55008|hect domain and RLD 6##AY653203|HERC6|55008|hect domain and RLD 6##NM_001165136|HERC6|55008|hect domain and RLD 6##NM_017912|HERC6|55008|hect domain and RLD 6##AY337518|HERC5|51191|hect domain and RLD 5##NM_016323|HERC5|51191|hect domain and RLD 5##AB027289|HERC5|51191|hect domain and RLD 5##BC140716|HERC5|51191|hect domain and RLD 5##AB206972|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##BC007876|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AK312082|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_001042616|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_032906|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y	0.778703	CTCF.p2:-29:0.779
chr8	130738672	130738774	reg1021069.p1	6.648	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1931940	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1990233	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1990398	+	AB042405 NM_031415	60410	-	BC003599 TSC_hg19_v1_chr8_-_130951934	213192	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	213283	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.997472	CTCF.p2:22:0.997
chr8	63924418	63924518	reg1021371.p1	6.648	+	TSC_hg19_v1_chr8_+_63161499 AK096949 NM_173688 AX721226 AB463913	-762904	+	TSC_hg19_v1_chr8_+_63161185 AK299689	-763262	+	TSC_hg19_v1_chr8_-_62627167 NM_001164754 NM_001164755 NM_001164756 NM_004318 NM_032466	-1297279	-	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	26930	-	NM_003878	27141	-	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	74159	-	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_001164754|ASPH|444|aspartate beta-hydroxylase##NM_001164755|ASPH|444|aspartate beta-hydroxylase##NM_001164756|ASPH|444|aspartate beta-hydroxylase##NM_004318|ASPH|444|aspartate beta-hydroxylase##NM_032466|ASPH|444|aspartate beta-hydroxylase##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##NM_003878|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein	0.07015	
chr12	54185625	54185753	reg1019547.p1	6.647	+	AB040969 TSC_hg19_v1_chr12_-_54121231 AF370415 AY563137 BC003177 AY358397 AL136895 AK122773 AK222646 AK092788 AX747731 AK294424 AK296497 AK309199 AK027881 AK315578 NM_001143682 NM_020898	-64435	-	NM_001002031	-115178	-	NM_005176	-115581	-	AF255676 NM_017410 BC090850 AF263466 BC002754 BT009908	146943	+	TSC_hg19_v1_chr12_+_54348683 AB464579 NM_173860	163009	+	NM_014212 AK291946 BC001543 AJ000041 CU674756	181278	+	AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1##BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001002031|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##NM_005176|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##AF255676|HOXC13|3229|homeobox C13##NM_017410|HOXC13|3229|homeobox C13##BC090850|HOXC13|3229|homeobox C13##AF263466|HOXC13|3229|homeobox C13##BC002754|HOXC13|3229|homeobox C13##BT009908|HOXC13|3229|homeobox C13##NM_173860|HOXC12|3228|homeobox C12##NM_014212|HOXC11|3227|homeobox C11##AK291946|HOXC11|3227|homeobox C11##BC001543|HOXC11|3227|homeobox C11##AJ000041|HOXC11|3227|homeobox C11	0.982205	CTCF.p2:4:0.982
chr13	114992151	114992313	reg1000671.p1	6.647	+	TSC_hg19_v1_chr13_-_114898084 BC047242 BC038456 NM_007368	-94129	-	TSC_hg19_v1_chr13_-_114898058 AK128094	-94166	-	TSC_hg19_v1_chr13_-_114898028 AK295861 AK313795	-94207	-	TSC_hg19_v1_chr13_+_115000360 NM_001078645 NM_003903	8127	+	TSC_hg19_v1_chr13_+_115000402 AK296424 BC017244 BC010875 AK315302 U18291 AB590520 AF164598 CU677877	8230	+	TSC_hg19_v1_chr13_+_115047085 AY013250 NM_023011 NM_080687 BC023569 BC047735 AK294545 AK302003 AF318575	54882	+	BC047242|RASA3|22821|RAS p21 protein activator 3##BC038456|RASA3|22821|RAS p21 protein activator 3##NM_007368|RASA3|22821|RAS p21 protein activator 3##AK128094|RASA3|22821|RAS p21 protein activator 3##AK295861|RASA3|22821|RAS p21 protein activator 3##AK313795|RASA3|22821|RAS p21 protein activator 3##NM_001078645|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##NM_003903|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AK296424|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC017244|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC010875|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AK315302|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##U18291|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AF164598|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AY013250|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_023011|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_080687|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC023569|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC047735|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK294545|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK302003|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AF318575|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)	0.0	
chr17	21032461	21032638	reg1021156.p1	6.647	+	TSC_hg19_v1_chr17_+_21030251 NM_015510 AL117567 AF151851 BC004126 BC009679 AK124055 CR457124	-2273	+	TSC_hg19_v1_chr17_+_20978860 AB593144	-53668	+	TSC_hg19_v1_chr17_-_20946322 AB590105 AB028986 NM_015276	-86277	-	TSC_hg19_v1_chr17_-_21117475 BT006768 AK311965 BC020815	84905	-	TSC_hg19_v1_chr17_-_21117480 BC002819	84939	-	TSC_hg19_v1_chr17_-_21117651 X51804	85127	-	NM_015510|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AL117567|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AF151851|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC004126|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC009679|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AK124055|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##CR457124|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AB028986|USP22|23326|ubiquitin specific peptidase 22##NM_015276|USP22|23326|ubiquitin specific peptidase 22##BT006768|TMEM11|8834|transmembrane protein 11##AK311965|TMEM11|8834|transmembrane protein 11##BC020815|TMEM11|8834|transmembrane protein 11##BC002819|TMEM11|8834|transmembrane protein 11##X51804|TMEM11|8834|transmembrane protein 11	0.745388	CTCF.p2:-29:0.745
chr17	77948723	77948857	reg1021700.p1	6.647	+	BC044939 TSC_hg19_v1_chr17_+_77893233	-55591	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	-135648	-	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-177883	-	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	60812	-	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	61658	+	TSC_hg19_v1_chr17_+_78075349 NM_000152 NM_001079803 NM_001079804	126536	+	AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40##NM_000152|GAA|2548|glucosidase, alpha; acid##NM_001079803|GAA|2548|glucosidase, alpha; acid##NM_001079804|GAA|2548|glucosidase, alpha; acid	0.330787	CTCF.p2:18:0.331
chr3	147795234	147795379	reg1021646.p1	6.647	+	BC104848 BC104850 TSC_hg19_v1_chr3_+_147127864 AB464362	-667444	+	TSC_hg19_v1_chr3_+_147127156 NM_003412	-668135	+	NM_001243256 NM_032153	-670711	-	NM_000685 NM_004835 NM_009585 NM_031850 TSC_hg19_v1_chr3_+_148415688 AK291541 BC068494 BC022447 M87290 S77410 X65699	620381	+	NM_032049	652660	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	750292	+	BC104848|ZIC1|7545|Zic family member 1##BC104850|ZIC1|7545|Zic family member 1##NM_003412|ZIC1|7545|Zic family member 1##NM_001243256|ZIC4|84107|Zic family member 4##NM_032153|ZIC4|84107|Zic family member 4##NM_000685|AGTR1|185|angiotensin II receptor, type 1##NM_004835|AGTR1|185|angiotensin II receptor, type 1##NM_009585|AGTR1|185|angiotensin II receptor, type 1##NM_031850|AGTR1|185|angiotensin II receptor, type 1##AK291541|AGTR1|185|angiotensin II receptor, type 1##BC068494|AGTR1|185|angiotensin II receptor, type 1##BC022447|AGTR1|185|angiotensin II receptor, type 1##M87290|AGTR1|185|angiotensin II receptor, type 1##S77410|AGTR1|185|angiotensin II receptor, type 1##X65699|AGTR1|185|angiotensin II receptor, type 1##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)	0.984769	CTCF.p2:0:0.985
chr1	231720043	231720157	reg1019932.p1	6.645	+	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	-55669	+	AF229245 NM_022051	-159311	-	TSC_hg19_v1_chr1_+_231473794 BC015740	-246313	+	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	42455	+	BC006013 NM_020808 AY168879	931169	-	TSC_hg19_v1_chr1_-_232878472 AK093200	1158357	-	FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)##NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)##BC015740|C1orf124|83932|chromosome 1 open reading frame 124##AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1##BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2	0.874185	CTCF.p2:0:0.874
chr16	89985119	89985234	reg1021836.p2	6.645	+	AK024232 NM_002386	-890	+	TSC_hg19_v1_chr16_+_89940021 BC011884 AK024679 BC009349 BC000959 AB528245 AB587412 CU674474 CU679309 EU446609	-45130	+	TSC_hg19_v1_chr16_+_89940003 NM_014972 AK301053	-45173	+	TSC_hg19_v1_chr16_+_89985278 AK225902 AK054666 BC007856	101	+	AK292219 NM_001197181	3240	+	NM_006086 TSC_hg19_v1_chr16_+_89989752 AK314616 AK058140 AK223039 AK307201 BC000748 BC003021 BC064975 AB590840 AF427491 CU674384 U47634 S62643	4582	+	AK024232|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)##NM_002386|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)##BC011884|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##AK024679|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##BC009349|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##BC000959|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##EU446609|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##NM_014972|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##AK301053|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##AK225902|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)##AK054666|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)##BC007856|MC1R|4157|melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)##AK292219|TUBB3|10381|tubulin, beta 3 class III##NM_001197181|TUBB3|10381|tubulin, beta 3 class III##NM_006086|TUBB3|10381|tubulin, beta 3 class III##AK314616|TUBB3|10381|tubulin, beta 3 class III##AK058140|TUBB3|10381|tubulin, beta 3 class III##AK223039|TUBB3|10381|tubulin, beta 3 class III##AK307201|TUBB3|10381|tubulin, beta 3 class III##BC000748|TUBB3|10381|tubulin, beta 3 class III##BC003021|TUBB3|10381|tubulin, beta 3 class III##BC064975|TUBB3|10381|tubulin, beta 3 class III##AF427491|TUBB3|10381|tubulin, beta 3 class III##U47634|TUBB3|10381|tubulin, beta 3 class III##S62643|TUBB3|10381|tubulin, beta 3 class III	0.219688	
chr19	10230598	10230724	reg1019237.p2	6.645	+	AB528489 BT006889 CR457134 CU678971 DQ890616 DQ896801 AF020833 U96074 TSC_hg19_v1_chr19_-_10230579 AK293374 AF094850 AK309944 AK316040 AK291320 BC000733 BC008469 AK316335 AK315896 AK296377 AK311624 NM_003755	-95	-	NM_002566 BC073827	-8457	+	BC171852 NM_001040664 NM_001198690 NM_020230 BC033202 TSC_hg19_v1_chr19_+_10217035 BC009833 AJ292529 CU679511 AJ300588	-13672	+	AF290894 TSC_hg19_v1_chr19_-_10291113 AB384943	60423	-	AB209413 TSC_hg19_v1_chr19_-_10305579	74896	-	TSC_hg19_v1_chr19_-_10305600 BC092517	74944	-	BT006889|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##CR457134|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##DQ890616|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##DQ896801|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AF020833|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##U96074|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK293374|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AF094850|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK309944|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK316040|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK291320|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##BC000733|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##BC008469|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK316335|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK315896|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK296377|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##NM_003755|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##NM_002566|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BC073827|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BC171852|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001040664|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001198690|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_020230|PPAN|56342|peter pan homolog (Drosophila)##BC033202|PPAN|56342|peter pan homolog (Drosophila)##BC009833|PPAN|56342|peter pan homolog (Drosophila)##AJ292529|PPAN|56342|peter pan homolog (Drosophila)##AJ300588|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##AB209413|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC092517|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1	0.0	
chr20	36244373	36244505	reg1022008.p1	6.645	+	TSC_hg19_v1_chr20_-_36156284 AK074498 NM_001167820 NM_006698	-88127	-	TSC_hg19_v1_chr20_-_36156274 AK124822 AF053470 BC047692 AL049288	-88186	-	NM_001167822 TSC_hg19_v1_chr20_-_36156087 BC071704 NM_001167821	-88332	-	TSC_hg19_v1_chr20_+_36322440 NM_030877 BC121005 BC121006 AF239607	77991	+	AK074663 AK130301 TSC_hg19_v1_chr20_+_36322443	78005	+	TSC_hg19_v1_chr20_+_36322503 AF370431 AK293420	78044	+	AK074498|BLCAP|10904|bladder cancer associated protein##NM_001167820|BLCAP|10904|bladder cancer associated protein##NM_006698|BLCAP|10904|bladder cancer associated protein##AK124822|BLCAP|10904|bladder cancer associated protein##AF053470|BLCAP|10904|bladder cancer associated protein##BC047692|BLCAP|10904|bladder cancer associated protein##AL049288|BLCAP|10904|bladder cancer associated protein##NM_001167822|BLCAP|10904|bladder cancer associated protein##BC071704|BLCAP|10904|bladder cancer associated protein##NM_001167821|BLCAP|10904|bladder cancer associated protein##NM_030877|CTNNBL1|56259|catenin, beta like 1##BC121005|CTNNBL1|56259|catenin, beta like 1##BC121006|CTNNBL1|56259|catenin, beta like 1##AF239607|CTNNBL1|56259|catenin, beta like 1##AK074663|CTNNBL1|56259|catenin, beta like 1##AK130301|CTNNBL1|56259|catenin, beta like 1##AF370431|CTNNBL1|56259|catenin, beta like 1##AK293420|CTNNBL1|56259|catenin, beta like 1	0.0	
chr5	65038496	65038614	reg1020915.p1	6.645	+	TSC_hg19_v1_chr5_+_65018049 NM_020726 AK096416 AK292803 AJ300837 BC001644 BC004985 AB463138 CU674806 AB033052	-20459	+	TSC_hg19_v1_chr5_-_65017944 AK096321 BC012044 AF368281 NM_019072	-20633	-	BX641157 BC012006 TSC_hg19_v1_chr5_+_64920864 AK023673 BC142994	-117705	+	NM_001006600 NM_001253697 NM_001253698 NM_001253699 NM_001253701 NM_018695 AF263744 AK295708 TSC_hg19_v1_chr5_+_65222405 AK304693	183854	+	TSC_hg19_v1_chr5_+_65222508 AF276423 BC050692	183969	+	TSC_hg19_v1_chr5_+_65222567 BC126464 BC144075	184025	+	NM_020726|NLN|57486|neurolysin (metallopeptidase M3 family)##AK096416|NLN|57486|neurolysin (metallopeptidase M3 family)##AK292803|NLN|57486|neurolysin (metallopeptidase M3 family)##AJ300837|NLN|57486|neurolysin (metallopeptidase M3 family)##BC001644|NLN|57486|neurolysin (metallopeptidase M3 family)##BC004985|NLN|57486|neurolysin (metallopeptidase M3 family)##AB463138|NLN|57486|neurolysin (metallopeptidase M3 family)##AB033052|NLN|57486|neurolysin (metallopeptidase M3 family)##AK096321|SGTB|54557|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta##BC012044|SGTB|54557|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta##AF368281|SGTB|54557|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta##NM_019072|SGTB|54557|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta##BX641157|C5orf44|80006|chromosome 5 open reading frame 44##BC012006|C5orf44|80006|chromosome 5 open reading frame 44##AK023673|C5orf44|80006|chromosome 5 open reading frame 44##BC142994|C5orf44|80006|chromosome 5 open reading frame 44##NM_001006600|ERBB2IP|55914|erbb2 interacting protein##NM_001253697|ERBB2IP|55914|erbb2 interacting protein##NM_001253698|ERBB2IP|55914|erbb2 interacting protein##NM_001253699|ERBB2IP|55914|erbb2 interacting protein##NM_001253701|ERBB2IP|55914|erbb2 interacting protein##NM_018695|ERBB2IP|55914|erbb2 interacting protein##AF263744|ERBB2IP|55914|erbb2 interacting protein##AK295708|ERBB2IP|55914|erbb2 interacting protein##AK304693|ERBB2IP|55914|erbb2 interacting protein##AF276423|ERBB2IP|55914|erbb2 interacting protein##BC050692|ERBB2IP|55914|erbb2 interacting protein##BC126464|ERBB2IP|55914|erbb2 interacting protein##BC144075|ERBB2IP|55914|erbb2 interacting protein	0.978747	CTCF.p2:-10:0.979
chr5	69006763	69006887	reg1021088.p1	6.645	+	TSC_hg19_v1_chr5_+_68856071 AF078847 AK292361 BC065021 NM_001042490 BC064557 U21911 BC157894 BC171919 BC171860	-150719	+	BC105980 TSC_hg19_v1_chr5_+_68856047 BX537982 AK315282 NM_001098728 BX647445	-150784	+	NM_001205255 FJ786083 FJ786084 GQ225096 GQ225097 GQ225098 GQ402517 AB587564 DQ892423 DQ895637 AB451306 AB451437	-206788	+	NM_021967 NM_022968 BC021174 NM_001178087 NM_022978 AF073519 AF073518 BC035932 BC093880 BC171749 BC101970 BC103687 BC104738 BC143260 BC093882 BC143255	314340	+	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	338607	+	TSC_hg19_v1_chr5_+_69696959 AK097091	690094	+	AF078847|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AK292361|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC065021|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##NM_001042490|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##BC064557|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##U21911|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##BC157894|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC171919|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##BC171860|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC105980|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BX537982|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##AK315282|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##NM_001098728|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BX647445|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D##NM_001205255|OCLN|100506658|occludin##FJ786083|OCLN|100506658|occludin##FJ786084|OCLN|100506658|occludin##GQ225096|OCLN|100506658|occludin##GQ225097|OCLN|100506658|occludin##GQ225098|OCLN|100506658|occludin##GQ402517|OCLN|100506658|occludin##DQ892423|OCLN|100506658|occludin##DQ895637|OCLN|100506658|occludin##AB451306|OCLN|100506658|occludin##AB451437|OCLN|100506658|occludin##NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric##AK097091|SMA4|11039|glucuronidase, beta pseudogene	0.98704	CTCF.p2:-8:0.987
chr9	10268941	10269046	reg1019684.p2	6.645	+	TSC_hg19_v1_chr9_+_8858136 AK094342	-1410860	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-1535074	-	TSC_hg19_v1_chr9_+_8713275 AY779046	-1555701	+	BC028038 NM_002839	343729	-	NM_000550 X51420 BC052608	2424432	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	2506023	+	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##AY779046|RPL18A|6142|ribosomal protein L18a##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150	0.635369	CTCF.p2:-11:0.635
chrX	101471624	101471766	reg1026912.p1	6.645	+	NM_001159560 BC092450 AY833564 BC042818 BC106955 NM_001012978	-60822	-	BC071675 NM_001006938 TSC_hg19_v1_chrX_-_101397444	-74288	-	NM_080390 AK312138 AF325115	-91009	+	NM_001099686 NM_022053 AK308255 AJ277526 BC015020	30438	+	BC015020 AJ277526 AK308255 NM_001099686 NM_022053	223193	-	AF086495 BC000183 AK311771 D82345 NM_021992	299974	-	NM_001159560|BEX5|340542|brain expressed, X-linked 5##BC092450|BEX5|340542|brain expressed, X-linked 5##AY833564|BEX5|340542|brain expressed, X-linked 5##BC042818|BEX5|340542|brain expressed, X-linked 5##BC106955|BEX5|340542|brain expressed, X-linked 5##NM_001012978|BEX5|340542|brain expressed, X-linked 5##BC071675|TCEAL6|158931|transcription elongation factor A (SII)-like 6##NM_001006938|TCEAL6|158931|transcription elongation factor A (SII)-like 6##NM_080390|TCEAL2|140597|transcription elongation factor A (SII)-like 2##AK312138|TCEAL2|140597|transcription elongation factor A (SII)-like 2##AF325115|TCEAL2|140597|transcription elongation factor A (SII)-like 2##NM_001099686|NXF2B|728343|nuclear RNA export factor 2B##NM_022053|NXF2|56001|nuclear RNA export factor 2##AK308255|NXF2B|728343|nuclear RNA export factor 2B##AJ277526|NXF2|56001|nuclear RNA export factor 2##BC015020|NXF2|56001|nuclear RNA export factor 2##BC015020|NXF2|56001|nuclear RNA export factor 2##AJ277526|NXF2|56001|nuclear RNA export factor 2##AK308255|NXF2B|728343|nuclear RNA export factor 2B##NM_001099686|NXF2B|728343|nuclear RNA export factor 2B##NM_022053|NXF2|56001|nuclear RNA export factor 2##AF086495|TMSB15A|11013|thymosin beta 15a##BC000183|TMSB15A|11013|thymosin beta 15a##AK311771|TMSB15B|286527|thymosin beta 15B##D82345|TMSB15A|11013|thymosin beta 15a##NM_021992|TMSB15A|11013|thymosin beta 15a	0.783834	CTCF.p2:-6:0.784
chr1	186373707	186373845	reg1024183.p1	6.644	+	BC069096 NM_022375	-4073	+	NM_001164245 NM_001164246 NM_017847 TSC_hg19_v1_chr1_+_186344992 AK298107 AK000512 AY854248 BC003397	-28804	+	TSC_hg19_v1_chr1_-_186344848 AK309473	-28935	-	AF076464 NM_022576	44079	-	M33478 NM_002597	56451	-	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	275714	-	BC069096|OCLM|10896|oculomedin##NM_022375|OCLM|10896|oculomedin##NM_001164245|C1orf27|54953|chromosome 1 open reading frame 27##NM_001164246|C1orf27|54953|chromosome 1 open reading frame 27##NM_017847|C1orf27|54953|chromosome 1 open reading frame 27##AK298107|C1orf27|54953|chromosome 1 open reading frame 27##AK000512|C1orf27|54953|chromosome 1 open reading frame 27##AY854248|C1orf27|54953|chromosome 1 open reading frame 27##BC003397|C1orf27|54953|chromosome 1 open reading frame 27##AK309473|TPR|7175|translocated promoter region (to activated MET oncogene)##AF076464|PDC|5132|phosducin##NM_022576|PDC|5132|phosducin##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	0.0	
chr17	46114448	46114577	reg1022344.p1	6.644	+	AF343090 TSC_hg19_v1_chr17_+_46048487 AF110322 AK225274 BC072435 AB062433 BC009957	-66018	+	TSC_hg19_v1_chr17_+_46048471 AF217982 AK023722	-66043	+	AK223387 NM_176096 TSC_hg19_v1_chr17_+_46048452	-66080	+	TSC_hg19_v1_chr17_-_46115160 AB590254 DQ893053 DQ896301 AB047849 BC015924 AB037938 NM_016429	638	-	TSC_hg19_v1_chr17_+_46125712 NM_003204 BC010623 AK090459	11187	+	AL833530 TSC_hg19_v1_chr17_+_46125724	11212	+	AF343090|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF110322|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK225274|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC072435|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AB062433|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC009957|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF217982|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK023722|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK223387|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##NM_176096|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##DQ893053|COPZ2|51226|coatomer protein complex, subunit zeta 2##DQ896301|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB047849|COPZ2|51226|coatomer protein complex, subunit zeta 2##BC015924|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB037938|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_016429|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	0.0	
chr1	202630444	202630538	reg1019460.p2	6.643	+	AK094430 NM_001136504	-17911	-	AB588820 NM_001197131 TSC_hg19_v1_chr1_+_202509319	-121211	+	AB050641 AB050642 NM_032103 NM_032104	-198621	+	BC100814 BC100815 BC100816 BC100817 AK090672 NM_177402 TSC_hg19_v1_chr1_-_202679575	49008	-	TSC_hg19_v1_chr1_-_202776401 AK122752	145953	-	TSC_hg19_v1_chr1_-_202777541 AJ132440	147036	-	AK094430|SYT2|127833|synaptotagmin II##NM_001136504|SYT2|127833|synaptotagmin II##AB588820|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001197131|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050641|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050642|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032103|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032104|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC100814|SYT2|127833|synaptotagmin II##BC100815|SYT2|127833|synaptotagmin II##BC100816|SYT2|127833|synaptotagmin II##BC100817|SYT2|127833|synaptotagmin II##AK090672|SYT2|127833|synaptotagmin II##NM_177402|SYT2|127833|synaptotagmin II##AK122752|KDM5B|10765|lysine (K)-specific demethylase 5B##AJ132440|KDM5B|10765|lysine (K)-specific demethylase 5B	1.111158	CTCF.p2:-23:0.925
chr5	14947080	14947194	reg1018711.p2	6.643	+	DQ892588 DQ895806 AK222631 AK315012 BC014526 AF274753 AY358503 TSC_hg19_v1_chr5_-_14871888 AL833238 AB046801 BC009835 NM_054027	-75282	-	TSC_hg19_v1_chr5_+_14664826 BC015392	-282296	+	TSC_hg19_v1_chr5_+_14664772 NM_138348	-282361	+	TSC_hg19_v1_chr5_+_15500291 AB020647 NM_012304	553162	+	BC136424 TSC_hg19_v1_chr5_+_15500549	553407	+	BC075061 TSC_hg19_v1_chr5_+_15500760	553611	+	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)##DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)##AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)##AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)##BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)##AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)##AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)##AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)##BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)##NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)##BC015392|FAM105B|90268|family with sequence similarity 105, member B##NM_138348|FAM105B|90268|family with sequence similarity 105, member B##AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7	0.934963	CTCF.p2:-6:0.935
chr8	133067803	133067949	reg1021810.p1	6.643	+	BX648595 TSC_hg19_v1_chr8_+_132991247	-76667	+	TSC_hg19_v1_chr8_+_132916408 AB385283	-151398	+	AK307433 TSC_hg19_v1_chr8_+_132916394	-151486	+	AK297911 NM_001080399	3750	-	NM_001145095	49635	-	AK296293 NM_001204824	391632	-	BX648595|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##AK307433|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##AK297911|OC90|729330|otoconin 90##NM_001080399|OC90|729330|otoconin 90##NM_001145095|HHLA1|10086|HERV-H LTR-associating 1##AK296293|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##NM_001204824|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3	0.842471	CTCF.p2:-2:0.842
chr1	87491011	87491135	reg1021976.p1	6.642	+	AB007917 TSC_hg19_v1_chr1_+_87380462	-110616	+	TSC_hg19_v1_chr1_+_87380374 BC025384 BC025990 NM_001134492 NM_012262 AK023260 AB024568 BC108735	-110720	+	TSC_hg19_v1_chr1_-_87380011 NM_004261 NM_203341	-111016	-	TSC_hg19_v1_chr1_+_87595568 BC030523	104476	+	NM_006769 U24576 TSC_hg19_v1_chr1_+_87794164	303084	+	AK292578 TSC_hg19_v1_chr1_+_87794564	303486	+	AB007917|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025384|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025990|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_001134492|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_012262|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AK023260|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AB024568|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC108735|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_004261|SEP15|9403|15 kDa selenoprotein##NM_203341|SEP15|9403|15 kDa selenoprotein##BC030523|LOC339524|339524|uncharacterized LOC339524##NM_006769|LMO4|8543|LIM domain only 4##U24576|LMO4|8543|LIM domain only 4##AK292578|LMO4|8543|LIM domain only 4	0.025963	
chr10	125656817	125656932	reg1017094.p1	6.641	+	BC137492 BC146862 AY358565 NM_198148	-5378	-	AJ505757 NM_153442 BC112011 BC113462	-230997	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-742518	+	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	195025	-	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	196279	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	450599	-	BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase	0.0	
chr10	129362345	129362453	reg1020651.p1	6.641	+	NM_001030013	-14787	+	AK127465 NM_001039762	-367978	-	TSC_hg19_v1_chr10_+_128594020 NM_001380 BC144632 BC146857 D50857	-768368	+	NM_207426	173138	+	CU688662 TSC_hg19_v1_chr10_-_129691142	328695	-	TSC_hg19_v1_chr10_-_129691206 BC029478 NM_152311	328808	-	NM_001030013|NPS|594857|neuropeptide S##AK127465|FAM196A|642938|family with sequence similarity 196, member A##NM_001039762|FAM196A|642938|family with sequence similarity 196, member A##NM_001380|DOCK1|1793|dedicator of cytokinesis 1##BC144632|DOCK1|1793|dedicator of cytokinesis 1##BC146857|DOCK1|1793|dedicator of cytokinesis 1##D50857|DOCK1|1793|dedicator of cytokinesis 1##NM_207426|FOXI2|399823|forkhead box I2##BC029478|CLRN3|119467|clarin 3##NM_152311|CLRN3|119467|clarin 3	0.999092	CTCF.p2:-6:0.999
chr7	150451371	150451489	reg1021150.p1	6.641	+	NM_001162367	-4607	+	TSC_hg19_v1_chr7_+_150434679 BC033688 BC011732	-16740	+	NM_018384 TSC_hg19_v1_chr7_+_150434485 AK002158 AK297881	-16955	+	TSC_hg19_v1_chr7_-_150497453 AK315575 AK000841 BC091471 AK129525 NM_001101311 NM_001101312 NM_001101314	46079	-	BC008303 TSC_hg19_v1_chr7_+_150497852 NM_018487 AF258340	46442	+	BC004358 BC014586 NM_014020 AK097304	46975	-	NM_001162367|LOC100128542|100128542|uncharacterized LOC100128542##BC033688|GIMAP5|55340|GTPase, IMAP family member 5##BC011732|GIMAP5|55340|GTPase, IMAP family member 5##NM_018384|GIMAP5|55340|GTPase, IMAP family member 5##AK002158|GIMAP5|55340|GTPase, IMAP family member 5##AK297881|GIMAP5|55340|GTPase, IMAP family member 5##AK315575|TMEM176B|28959|transmembrane protein 176B##AK000841|TMEM176B|28959|transmembrane protein 176B##BC091471|TMEM176B|28959|transmembrane protein 176B##AK129525|TMEM176B|28959|transmembrane protein 176B##NM_001101311|TMEM176B|28959|transmembrane protein 176B##NM_001101312|TMEM176B|28959|transmembrane protein 176B##NM_001101314|TMEM176B|28959|transmembrane protein 176B##BC008303|TMEM176A|55365|transmembrane protein 176A##NM_018487|TMEM176A|55365|transmembrane protein 176A##AF258340|TMEM176A|55365|transmembrane protein 176A##BC004358|TMEM176B|28959|transmembrane protein 176B##BC014586|TMEM176B|28959|transmembrane protein 176B##NM_014020|TMEM176B|28959|transmembrane protein 176B##AK097304|TMEM176B|28959|transmembrane protein 176B	0.012712	
chr12	52615939	52616051	reg1019243.p1	6.640	+	BC117348 BC126393 BC038743 NM_001242696	-11432	-	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	-30251	-	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	-152197	+	NM_005556 TSC_hg19_v1_chr12_+_52626966	10967	+	TSC_hg19_v1_chr12_+_52627029 AK025881 AK128848 AF509887 AJ238246 X03212 AK128505 AK225498 BC002700 DQ892996 DQ896244 AB590146 CU678130	11048	+	AB527612 HQ258431 BC117465 BC117467 NM_002281	69278	-	BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80##BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##NM_005556|KRT7|3855|keratin 7##AK025881|KRT7|3855|keratin 7##AK128848|KRT7|3855|keratin 7##AF509887|KRT7|3855|keratin 7##AJ238246|KRT7|3855|keratin 7##X03212|KRT7|3855|keratin 7##AK128505|KRT7|3855|keratin 7##AK225498|KRT7|3855|keratin 7##BC002700|KRT7|3855|keratin 7##DQ892996|KRT7|3855|keratin 7##DQ896244|KRT7|3855|keratin 7##HQ258431|KRT81|3887|keratin 81##BC117465|KRT81|3887|keratin 81##BC117467|KRT81|3887|keratin 81##NM_002281|KRT81|3887|keratin 81	0.0	
chr2	73981135	73981267	reg1023415.p1	6.640	+	TSC_hg19_v1_chr2_-_73964473 AK291071 AF060921 AK097254 AY643713 BC029492 AK295239 AF151879 NM_016058	-16730	-	AF185571 BC069564 BC121101 BC121102 NM_016347	-52735	-	AB019551 BC012626 AF187813 NM_003960	-111687	-	CU674166 DQ891356 DQ894537 TSC_hg19_v1_chr2_-_74007231 BC000346 AF023917 AK315271 CR627368 NM_003584	25992	-	AK125975 NM_001080474	30114	+	NM_201647 TSC_hg19_v1_chr2_+_74056093	74867	+	AK291071|TPRKB|51002|TP53RK binding protein##AF060921|TPRKB|51002|TP53RK binding protein##AK097254|TPRKB|51002|TP53RK binding protein##AY643713|TPRKB|51002|TP53RK binding protein##BC029492|TPRKB|51002|TP53RK binding protein##AK295239|TPRKB|51002|TP53RK binding protein##AF151879|TPRKB|51002|TP53RK binding protein##NM_016058|TPRKB|51002|TP53RK binding protein##AF185571|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC069564|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC121101|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC121102|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##NM_016347|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##AB019551|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##BC012626|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##AF187813|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##NM_003960|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AK125975|C2orf78|388960|chromosome 2 open reading frame 78##NM_001080474|C2orf78|388960|chromosome 2 open reading frame 78##NM_201647|STAMBP|10617|STAM binding protein	0.830069	CTCF.p2:-15:0.830
chr9	757633	757772	reg1023257.p1	6.640	+	TSC_hg19_v1_chr9_+_706828 BC038116 NM_153186	-50872	+	AB205112 TSC_hg19_v1_chr9_+_686677	-71036	+	AK311119 AB205111 TSC_hg19_v1_chr9_+_684289	-73458	+	AF130728 AY442914 AY442915 NM_021951 AK313594 AJ276801 AL162131 BC040847 EU446468 AB463577 CU691924	84061	+	NM_021240 BC113584 BC117245	219263	+	AF193873 TSC_hg19_v1_chr9_+_977425	219703	+	BC038116|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_153186|KANK1|23189|KN motif and ankyrin repeat domains 1##AF130728|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442914|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442915|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021951|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AK313594|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AJ276801|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AL162131|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BC040847|DMRT1|1761|doublesex and mab-3 related transcription factor 1##EU446468|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021240|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC113584|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC117245|DMRT3|58524|doublesex and mab-3 related transcription factor 3##AF193873|DMRT3|58524|doublesex and mab-3 related transcription factor 3	0.340646	CTCF.p2:30:0.341
chr16	12630029	12630209	reg1019368.p2	6.639	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-559546	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-571035	+	NM_001130007	-619601	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	267532	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	267600	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	365349	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr18	60090469	60090585	reg1021840.p1	6.639	+	AB209762 AF018253 NM_003839 AB527346	-97977	+	TSC_hg19_v1_chr18_+_59855176 AB384606	-235317	+	TSC_hg19_v1_chr18_+_59854540 BX648481	-235939	+	NM_017742 TSC_hg19_v1_chr18_+_60190696 BC006340	100227	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	292137	+	TSC_hg19_v1_chr18_+_60383911 AB011178	293399	+	AB209762|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##AF018253|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_003839|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##BX648481|KIAA1468|57614|KIAA1468##NM_017742|ZCCHC2|54877|zinc finger, CCHC domain containing 2##BC006340|ZCCHC2|54877|zinc finger, CCHC domain containing 2##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1	0.983174	CTCF.p2:6:0.983
chr8	29732622	29732745	reg1021104.p1	6.639	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-524613	-	AL137704 NM_057158	-526362	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-612069	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	207791	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	207889	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	220260	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chr12	131490068	131490180	reg1018311.p1	6.638	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-51671	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-133413	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-133499	+	TSC_hg19_v1_chr12_+_132195623 BC142980	705489	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	705532	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	822842	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.313886	CTCF.p2:21:0.314
chr16	3011829	3011981	reg1022939.p1	6.638	+	TSC_hg19_v1_chr16_+_2961994 AB046772	-49908	+	TSC_hg19_v1_chr16_+_2961983 BC028572 NM_020912 NM_032296	-49941	+	NM_001142499 NM_001142500 NM_138439 TSC_hg19_v1_chr16_+_2933215 BC014089	-78649	+	BC009383 NM_001253725 NM_001253726 NM_024507 NM_172229 AK075033 AK301953 AK027669 BC003533 AK223422 AB086355 AB086356 AB086357 AB086405 DQ896447	2463	+	NM_152341 TSC_hg19_v1_chr16_+_3019348	7441	+	TSC_hg19_v1_chr16_+_3019556 AK291373 AK054564 AK092173 AX747391 BC033703 AL832527 EU831903 EU831998 AY424282	7665	+	AB046772|FLYWCH1|84256|FLYWCH-type zinc finger 1##BC028572|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_020912|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_032296|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_001142499|FLYWCH2|114984|FLYWCH family member 2##NM_001142500|FLYWCH2|114984|FLYWCH family member 2##NM_138439|FLYWCH2|114984|FLYWCH family member 2##BC014089|FLYWCH2|114984|FLYWCH family member 2##BC009383|KREMEN2|79412|kringle containing transmembrane protein 2##NM_001253725|KREMEN2|79412|kringle containing transmembrane protein 2##NM_001253726|KREMEN2|79412|kringle containing transmembrane protein 2##NM_024507|KREMEN2|79412|kringle containing transmembrane protein 2##NM_172229|KREMEN2|79412|kringle containing transmembrane protein 2##AK075033|KREMEN2|79412|kringle containing transmembrane protein 2##AK301953|KREMEN2|79412|kringle containing transmembrane protein 2##AK027669|KREMEN2|79412|kringle containing transmembrane protein 2##BC003533|KREMEN2|79412|kringle containing transmembrane protein 2##AK223422|KREMEN2|79412|kringle containing transmembrane protein 2##AB086355|KREMEN2|79412|kringle containing transmembrane protein 2##AB086356|KREMEN2|79412|kringle containing transmembrane protein 2##AB086357|KREMEN2|79412|kringle containing transmembrane protein 2##AB086405|KREMEN2|79412|kringle containing transmembrane protein 2##DQ896447|KREMEN2|79412|kringle containing transmembrane protein 2##NM_152341|PAQR4|124222|progestin and adipoQ receptor family member IV##AK291373|PAQR4|124222|progestin and adipoQ receptor family member IV##AK054564|PAQR4|124222|progestin and adipoQ receptor family member IV##AK092173|PAQR4|124222|progestin and adipoQ receptor family member IV##BC033703|PAQR4|124222|progestin and adipoQ receptor family member IV##AL832527|PAQR4|124222|progestin and adipoQ receptor family member IV##EU831903|PAQR4|124222|progestin and adipoQ receptor family member IV##EU831998|PAQR4|124222|progestin and adipoQ receptor family member IV##AY424282|PAQR4|124222|progestin and adipoQ receptor family member IV	0.99085	CTCF.p2:-4:0.991
chr20	3767542	3767641	reg1017829.p1	6.638	+	TSC_hg19_v1_chr20_-_3767358 X05299 AB464478 AF002713 BC053847 NM_001810	-456	-	BC012297 BC003649 TSC_hg19_v1_chr20_-_3765799 BC033658 BC040446	-1748	-	BC022476 AL080154 EF560745 NM_015417 AK313766	-5505	-	AK092713 FR695900 FR695901 NM_004358 NM_021872 NM_021873 TSC_hg19_v1_chr20_+_3776429 BX647988 BC051711	8842	+	TSC_hg19_v1_chr20_+_3776956 S78187 Z68092 BC006395 M81934	9414	+	TSC_hg19_v1_chr20_+_3801202 NM_001204446 NM_001204447 NM_018347 BC011985 AK002030 AK093332 BC043344	33607	+	X05299|CENPB|1059|centromere protein B, 80kDa##AF002713|CENPB|1059|centromere protein B, 80kDa##BC053847|CENPB|1059|centromere protein B, 80kDa##NM_001810|CENPB|1059|centromere protein B, 80kDa##BC012297|CENPB|1059|centromere protein B, 80kDa##BC003649|CENPB|1059|centromere protein B, 80kDa##BC033658|CENPB|1059|centromere protein B, 80kDa##BC040446|CENPB|1059|centromere protein B, 80kDa##BC022476|SPEF1|25876|sperm flagellar 1##AL080154|SPEF1|25876|sperm flagellar 1##EF560745|SPEF1|25876|sperm flagellar 1##NM_015417|SPEF1|25876|sperm flagellar 1##AK313766|SPEF1|25876|sperm flagellar 1##AK092713|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##FR695900|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##FR695901|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_004358|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_021872|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_021873|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BX647988|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BC051711|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##S78187|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##Z68092|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BC006395|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##M81934|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_001204446|C20orf29|55317|chromosome 20 open reading frame 29##NM_001204447|C20orf29|55317|chromosome 20 open reading frame 29##NM_018347|C20orf29|55317|chromosome 20 open reading frame 29##BC011985|C20orf29|55317|chromosome 20 open reading frame 29##AK002030|C20orf29|55317|chromosome 20 open reading frame 29##AK093332|C20orf29|55317|chromosome 20 open reading frame 29##BC043344|C20orf29|55317|chromosome 20 open reading frame 29	0.037473	
chr22	38749398	38749578	reg1000822.p2	6.638	+	AB024597 NM_001894	-35400	-	TSC_hg19_v1_chr22_-_38713439 NM_152221	-36074	-	BC006490 AB091043 TSC_hg19_v1_chr22_-_38713340 AK223498	-36197	-	TSC_hg19_v1_chr22_-_38794883 AK307225 AK310303	45380	-	NM_004981 S72503 U07364	90544	-	CR456507 BC039618 U24056 NM_152868 BC032562	101620	-	AB024597|CSNK1E|1454|casein kinase 1, epsilon##NM_001894|CSNK1E|1454|casein kinase 1, epsilon##NM_152221|CSNK1E|1454|casein kinase 1, epsilon##BC006490|CSNK1E|1454|casein kinase 1, epsilon##AB091043|CSNK1E|1454|casein kinase 1, epsilon##AK223498|CSNK1E|1454|casein kinase 1, epsilon##AK307225|LOC400927|400927|TPTE and PTEN homologous inositol lipid phosphatase pseudogene##NM_004981|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##S72503|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##U07364|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##CR456507|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##BC039618|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##U24056|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##NM_152868|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##BC032562|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4	0.019318	
chr3	123278043	123278158	reg1019207.p1	6.638	+	AB527359 NM_183357	-110709	-	AK303070 NM_001199642	-142912	-	NM_012430 TSC_hg19_v1_chr3_+_122920787 AK315771 AF100749	-357310	+	TSC_hg19_v1_chr3_-_123303927 CU687458 AK289983 NM_198402 AK125375 BC060839 AY191814 BC049369	25833	-	BC113458 BC113456 BC100761 BC100762 BC100763 AF096773 AF096774 AF096775 AK314412 TSC_hg19_v1_chr3_-_123339352 BC017811 BC107783 Y09530 BC064420 AK314443	61184	-	TSC_hg19_v1_chr3_-_123339426 NM_053031 NM_053032	61376	-	NM_183357|ADCY5|111|adenylate cyclase 5##AK303070|ADCY5|111|adenylate cyclase 5##NM_001199642|ADCY5|111|adenylate cyclase 5##NM_012430|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK315771|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AF100749|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK289983|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##NM_198402|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC060839|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AY191814|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC049369|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC113458|MYLK|4638|myosin light chain kinase##BC113456|MYLK|4638|myosin light chain kinase##BC100761|MYLK|4638|myosin light chain kinase##BC100762|MYLK|4638|myosin light chain kinase##BC100763|MYLK|4638|myosin light chain kinase##AF096773|MYLK|4638|myosin light chain kinase##AF096774|MYLK|4638|myosin light chain kinase##AF096775|MYLK|4638|myosin light chain kinase##AK314412|MYLK|4638|myosin light chain kinase##BC017811|MYLK|4638|myosin light chain kinase##BC107783|MYLK|4638|myosin light chain kinase##Y09530|MYLK|4638|myosin light chain kinase##BC064420|MYLK|4638|myosin light chain kinase##AK314443|MYLK|4638|myosin light chain kinase##NM_053031|MYLK|4638|myosin light chain kinase##NM_053032|MYLK|4638|myosin light chain kinase	0.999175	CTCF.p2:-4:0.999
chr3	131753850	131753973	reg1020511.p1	6.638	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	-71	-	TSC_hg19_v1_chr3_-_131221816 CR456720 CU678442 BC002345 X06323 BC003375 AK301377 AK296626 NM_007208	-532157	-	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	-653260	+	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	282327	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	282377	+	AB014578 BC151246 TSC_hg19_v1_chr3_+_132136540 AY779857 BC043583 NM_015268	382616	+	AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##CR456720|MRPL3|11222|mitochondrial ribosomal protein L3##X06323|MRPL3|11222|mitochondrial ribosomal protein L3##BC003375|MRPL3|11222|mitochondrial ribosomal protein L3##AK301377|MRPL3|11222|mitochondrial ribosomal protein L3##AK296626|MRPL3|11222|mitochondrial ribosomal protein L3##NM_007208|MRPL3|11222|mitochondrial ribosomal protein L3##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate##AB014578|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC151246|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AY779857|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC043583|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##NM_015268|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13	1.052534	CTCF.p2:10:0.850	CTCF.p2:-59:0.203
chr5	36944829	36944963	reg1018325.p1	6.638	+	TSC_hg19_v1_chr5_+_36876945 BC146821 BX640644 BC131490 AK290347 BX538178 BX538177	-67826	+	TSC_hg19_v1_chr5_+_36876875 NM_015384 NM_133433 AJ627032 AJ640137	-68032	+	TSC_hg19_v1_chr5_-_36876762 AK000901	-68133	-	AK055192 TSC_hg19_v1_chr5_-_37185009	240081	-	TSC_hg19_v1_chr5_-_37249466 NM_023073	304570	-	AB018334 NM_004298	425990	-	BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)##BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)##BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)##AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)##NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)##NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)##AK000901|LOC646719|646719|uncharacterized LOC646719##AK055192|C5orf42|65250|chromosome 5 open reading frame 42##NM_023073|C5orf42|65250|chromosome 5 open reading frame 42##AB018334|NUP155|9631|nucleoporin 155kDa##NM_004298|NUP155|9631|nucleoporin 155kDa	0.980898	CTCF.p2:11:0.981
chr9	37594607	37594703	reg1021017.p1	6.638	+	TSC_hg19_v1_chr9_-_37592575 BC029423 NM_001001790 NM_001134484 NM_001134485	-2050	-	CR627326 AB435233 TSC_hg19_v1_chr9_-_37592574 BC034247	-2136	-	AF174598 AF176705 NM_012166 TSC_hg19_v1_chr9_-_37576280	-18390	-	TSC_hg19_v1_chr9_+_37650996 AB023184 NM_014907 BC114965	56379	+	TSC_hg19_v1_chr9_+_37753801 AK056017 NM_144964	159130	+	AK294219 TSC_hg19_v1_chr9_+_37753812 AK304516 AK092718 AK295733 AK315922 AX747687 BC057774 BC012175	159171	+	BC029423|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001001790|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134484|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134485|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##AB435233|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC034247|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##AF174598|FBXO10|26267|F-box protein 10##AF176705|FBXO10|26267|F-box protein 10##NM_012166|FBXO10|26267|F-box protein 10##AB023184|FRMPD1|22844|FERM and PDZ domain containing 1##NM_014907|FRMPD1|22844|FERM and PDZ domain containing 1##BC114965|FRMPD1|22844|FERM and PDZ domain containing 1##AK056017|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##NM_144964|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##AK294219|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##AK304516|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##AK092718|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##AK295733|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##AK315922|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##BC057774|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3##BC012175|RG9MTD3|158234|RNA (guanine-9-) methyltransferase domain containing 3	0.420746	CTCF.p2:14:0.421
chr8	105698787	105698907	reg1018903.p1	6.637	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-97600	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-97672	-	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	-219632	-	AF119334 BC109222 BC109223 NM_012082	632299	+	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	1583576	+	AK296561 NM_001198532	1761304	+	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1	0.905887	CTCF.p2:15:0.906
chr9	109046704	109046833	reg1023931.p1	6.637	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-589850	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	-589915	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	-622011	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	578596	+	TSC_hg19_v1_chr9_+_109686439 CR749850	639701	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	998764	+	AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##CR749850|ZNF462|58499|zinc finger protein 462##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.022519	
chr11	90981498	90981607	reg1022030.p1	6.636	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-997142	+	AK290231 NM_001144073 NM_012124	-1025021	-	CU687242 BC002339 BC072461 TSC_hg19_v1_chr11_-_89956218 AF192466 AK226099 AK225565 AK312663 AF123249 AK225365	-1025350	-	NM_001008781	1103709	+	BC069163 NM_005959 U25341 AY521019	1721287	+	TSC_hg19_v1_chr11_-_92930978 CU690400	1949435	-	AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC002339|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC072461|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF192466|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK226099|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225565|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK312663|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF123249|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225365|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B	0.991448	CTCF.p2:9:0.991
chr3	34148431	34148541	reg1021627.p2	6.636	+	TSC_hg19_v1_chr3_+_33840125 AF250394 GQ131806 AB384596 CU676494 CU686637 BT007367	-308315	+	TSC_hg19_v1_chr3_+_33840120 AF151793 BC020066	-308379	+	TSC_hg19_v1_chr3_+_33840081 BC068454 AF349951	-308403	+	TSC_hg19_v1_chr3_+_35681016 BC041385 AK057559	1532615	+	BC051828 NM_016300	1535362	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	1572710	+	AF250394|PDCD6IP|10015|programmed cell death 6 interacting protein##GQ131806|PDCD6IP|10015|programmed cell death 6 interacting protein##BT007367|PDCD6IP|10015|programmed cell death 6 interacting protein##AF151793|PDCD6IP|10015|programmed cell death 6 interacting protein##BC020066|PDCD6IP|10015|programmed cell death 6 interacting protein##BC068454|PDCD6IP|10015|programmed cell death 6 interacting protein##AF349951|PDCD6IP|10015|programmed cell death 6 interacting protein##BC041385|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK057559|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	0.999433	CTCF.p2:-18:0.999
chr6	17702190	17702354	reg1023807.p1	6.636	+	TSC_hg19_v1_chr6_+_17600620 NM_016255 AK296393 AK312814 AF097027 BC047881	-101673	+	AK312362 NM_006366 TSC_hg19_v1_chr6_+_17393918 AL832154 AK295600 AK294215 AK293134 AK297538 AK308461 BC008481	-308490	+	AK055391 NM_153020 BC104808 BC104810 BC040928	-419268	+	Z25535 AB384675 AK295644 BC052965 NM_005124 TSC_hg19_v1_chr6_-_17707139 AB210024	4630	-	AJ291578 AJ291579 BC127115 BC127116 AY014403 AY014404 TSC_hg19_v1_chr6_-_17987786	285488	-	TSC_hg19_v1_chr6_-_17987867 BC062673 NM_001105566 NM_001105567 NM_001105568 NM_001243423 NM_022113	285594	-	NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1##AK296393|FAM8A1|51439|family with sequence similarity 8, member A1##AK312814|FAM8A1|51439|family with sequence similarity 8, member A1##AF097027|FAM8A1|51439|family with sequence similarity 8, member A1##BC047881|FAM8A1|51439|family with sequence similarity 8, member A1##AK312362|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##NM_006366|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AL832154|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK295600|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK294215|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK293134|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK297538|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK308461|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##BC008481|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK055391|RBM24|221662|RNA binding motif protein 24##NM_153020|RBM24|221662|RNA binding motif protein 24##BC104808|RBM24|221662|RNA binding motif protein 24##BC104810|RBM24|221662|RNA binding motif protein 24##BC040928|RBM24|221662|RNA binding motif protein 24##Z25535|NUP153|9972|nucleoporin 153kDa##AK295644|NUP153|9972|nucleoporin 153kDa##BC052965|NUP153|9972|nucleoporin 153kDa##NM_005124|NUP153|9972|nucleoporin 153kDa##AB210024|NUP153|9972|nucleoporin 153kDa##AJ291578|KIF13A|63971|kinesin family member 13A##AJ291579|KIF13A|63971|kinesin family member 13A##BC127115|KIF13A|63971|kinesin family member 13A##BC127116|KIF13A|63971|kinesin family member 13A##AY014403|KIF13A|63971|kinesin family member 13A##AY014404|KIF13A|63971|kinesin family member 13A##BC062673|KIF13A|63971|kinesin family member 13A##NM_001105566|KIF13A|63971|kinesin family member 13A##NM_001105567|KIF13A|63971|kinesin family member 13A##NM_001105568|KIF13A|63971|kinesin family member 13A##NM_001243423|KIF13A|63971|kinesin family member 13A##NM_022113|KIF13A|63971|kinesin family member 13A	0.991535	CTCF.p2:-17:0.992
chr6_cox_hap2	3247275	3247341	reg1020138.p1	6.636	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.994584	CTCF.p2:0:0.995
chr11	88620085	88620220	reg1021566.p1	6.635	+	TSC_hg19_v1_chr11_-_88070905 BX537913 NM_001114173 NM_001814 NM_148170	-549221	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	-549250	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	-549285	-	AY608336 D28538 D28539 NM_001143831	160987	-	AK291362 NM_000842	176663	-	NM_000372 BC027179 M74314 Y00819 U01873 J03581	290928	+	BX537913|CTSC|1075|cathepsin C##NM_001114173|CTSC|1075|cathepsin C##NM_001814|CTSC|1075|cathepsin C##NM_148170|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AY608336|GRM5|2915|glutamate receptor, metabotropic 5##D28538|GRM5|2915|glutamate receptor, metabotropic 5##D28539|GRM5|2915|glutamate receptor, metabotropic 5##NM_001143831|GRM5|2915|glutamate receptor, metabotropic 5##AK291362|GRM5|2915|glutamate receptor, metabotropic 5##NM_000842|GRM5|2915|glutamate receptor, metabotropic 5##NM_000372|TYR|7299|tyrosinase (oculocutaneous albinism IA)##BC027179|TYR|7299|tyrosinase (oculocutaneous albinism IA)##M74314|TYR|7299|tyrosinase (oculocutaneous albinism IA)##Y00819|TYR|7299|tyrosinase (oculocutaneous albinism IA)##U01873|TYR|7299|tyrosinase (oculocutaneous albinism IA)##J03581|TYR|7299|tyrosinase (oculocutaneous albinism IA)	0.555663	CTCF.p2:12:0.556
chr12	41340560	41340706	reg1025074.p1	6.635	+	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	-254351	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	-721774	+	TSC_hg19_v1_chr12_-_40499870 BC047507	-840761	-	TSC_hg19_v1_chr12_+_41582170 NM_001164595	241575	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	490954	+	TSC_hg19_v1_chr12_-_42538503 AK125141 NM_001099650 NM_173601 BC030023	1197946	-	AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4##AK125141|GXYLT1|283464|glucoside xylosyltransferase 1##NM_001099650|GXYLT1|283464|glucoside xylosyltransferase 1##NM_173601|GXYLT1|283464|glucoside xylosyltransferase 1##BC030023|GXYLT1|283464|glucoside xylosyltransferase 1	0.234121	CTCF.p2:-17:0.234
chr4	177071598	177071693	reg1020530.p1	6.634	+	TSC_hg19_v1_chr4_+_176987148 BC118549 BC118627 AK098748 DQ426895 DQ426896	-84476	+	BC146812 NM_170710 NM_181265 AF492460 TSC_hg19_v1_chr4_+_176987137	-84584	+	TSC_hg19_v1_chr4_-_176923575 NM_005277 NM_201592	-148036	-	CU692400 TSC_hg19_v1_chr4_-_177116722 BC021731 BC029428 AY040204 NM_144644	45122	-	AY057053 CU688084 AK096441 BC065710 BX647857 NM_080874	118670	-	TSC_hg19_v1_chr4_+_177241098 NM_021928	169408	+	BC118549|WDR17|116966|WD repeat domain 17##BC118627|WDR17|116966|WD repeat domain 17##AK098748|WDR17|116966|WD repeat domain 17##DQ426895|WDR17|116966|WD repeat domain 17##DQ426896|WDR17|116966|WD repeat domain 17##BC146812|WDR17|116966|WD repeat domain 17##NM_170710|WDR17|116966|WD repeat domain 17##NM_181265|WDR17|116966|WD repeat domain 17##AF492460|WDR17|116966|WD repeat domain 17##NM_005277|GPM6A|2823|glycoprotein M6A##NM_201592|GPM6A|2823|glycoprotein M6A##BC021731|SPATA4|132851|spermatogenesis associated 4##BC029428|SPATA4|132851|spermatogenesis associated 4##AY040204|SPATA4|132851|spermatogenesis associated 4##NM_144644|SPATA4|132851|spermatogenesis associated 4##AY057053|ASB5|140458|ankyrin repeat and SOCS box containing 5##AK096441|ASB5|140458|ankyrin repeat and SOCS box containing 5##BC065710|ASB5|140458|ankyrin repeat and SOCS box containing 5##BX647857|ASB5|140458|ankyrin repeat and SOCS box containing 5##NM_080874|ASB5|140458|ankyrin repeat and SOCS box containing 5##NM_021928|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)	0.998311	CTCF.p2:-20:0.998
chr4	97273523	97273660	reg1024531.p1	6.634	+	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	-512333	+	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	-803215	-	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	-803412	-	CU691442 BC036870 NM_174952	1790754	-	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	1909003	+	TSC_hg19_v1_chr4_-_99579781 BC009704 AF065389 AK315723 NM_005723	2306168	-	NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC009704|TSPAN5|10098|tetraspanin 5##AF065389|TSPAN5|10098|tetraspanin 5##AK315723|TSPAN5|10098|tetraspanin 5##NM_005723|TSPAN5|10098|tetraspanin 5	0.994503	CTCF.p2:10:0.995
chr6	31364827	31364933	reg1019633.p1	6.634	+	TSC_hg19_v1_chr6_-_31324990 AK124160 NM_005514 L42024	-39882	-	AK129796 AK130137 AK130166 AK130169 AK290570 AK292226 AK300685 AK301008 AK303541 AK309345 AK310586 AK313911 TSC_hg19_v1_chr6_-_31324957 BX647315	-39923	-	D14343 M28204 AF436095 AF436096 L20086 L20088 L20089 M86403 DQ336696 AF436090 AF436091 AF436092 AF436093 D87665 M12678 M15470 M28203 TSC_hg19_v1_chr6_-_31324946 BC007243 DQ336697 AF006634 AF022783 AF026218 AF170577 AF189017 AF418978 AF436098 AJ634528 AM711637 D25275 D31816 D49824 D50290 D50292 D50294 D50295 D50299 D50300 D83043 D85761 D85762 FM205711 L04695 L04696 L07743 L09736 L11603 L11604 L11666 L15005 L17005 L19923 L19937 L22027 L22028 L24373 L33922 L36318 L36591 L37880 L37881 L38504 L41214 L41925 L42345 M24033 M28205 M32317 M32319 M32320 M77774 M77775 M77776 M77777 M77778 M81798 M84380 M84381 M84382 M84383 M84384 M84385 M84694 U01848 U03027 U03698 U03859 U04243 U04244 U04245 U04787 U09864 U09912 U11262 U11264 U11265 U11266 U11268 U11269 U14943 U17107 U17572 U21052 U21053 U27608 U29057 U29083 U29480 U30904 U30936 U31971 U35431 U35734 U36492 U38800 U40498 U63653 U70528 U80945 U88407 X61706 X61708 X64454 X73578 X77658 X81363 X84725 X90390 X90391 X91749 Y08995 Y09058 Y09118 Y13029 Y13567 Z15143 Z22651 Z33453 AF389378 AF428252 AJ535113 BC091497 AY007140 BC013187 M16102 AK026595 AK130155 AK130654	-39956	-	TSC_hg19_v1_chr6_+_31368497 AK310028	3597	+	BC016929 AK225393 L14848 NM_000247 NM_001177519 AK299135 AB590509 CU677769 AB506764 AY204547 AY750850	6502	+	TSC_hg19_v1_chr6_+_31430961 BX640979 AK093953 AK290875 L06175 AJ437509 BC106759 BC113853 BC114462	66102	+	AK124160|HLA-B|3106|major histocompatibility complex, class I, B##NM_005514|HLA-B|3106|major histocompatibility complex, class I, B##AK292226|HLA-B|3106|major histocompatibility complex, class I, B##AK300685|HLA-B|3106|major histocompatibility complex, class I, B##AK310586|HLA-B|3106|major histocompatibility complex, class I, B##AK313911|HLA-B|3106|major histocompatibility complex, class I, B##BX647315|HLA-B|3106|major histocompatibility complex, class I, B##M28204|HLA-B|3106|major histocompatibility complex, class I, B##AF436095|HLA-B|3106|major histocompatibility complex, class I, B##AF436096|HLA-B|3106|major histocompatibility complex, class I, B##DQ336696|HLA-B|3106|major histocompatibility complex, class I, B##AF436090|HLA-B|3106|major histocompatibility complex, class I, B##AF436091|HLA-B|3106|major histocompatibility complex, class I, B##AF436092|HLA-B|3106|major histocompatibility complex, class I, B##AF436093|HLA-B|3106|major histocompatibility complex, class I, B##D87665|HLA-B|3106|major histocompatibility complex, class I, B##M12678|HLA-B|3106|major histocompatibility complex, class I, B##M15470|HLA-B|3106|major histocompatibility complex, class I, B##M28203|HLA-B|3106|major histocompatibility complex, class I, B##BC007243|HLA-B|3106|major histocompatibility complex, class I, B##DQ336697|HLA-B|3106|major histocompatibility complex, class I, B##AF022783|HLA-B|3106|major histocompatibility complex, class I, B##AF026218|HLA-B|3106|major histocompatibility complex, class I, B##AF170577|HLA-B|3106|major histocompatibility complex, class I, B##AF189017|HLA-B|3106|major histocompatibility complex, class I, B##AF436098|HLA-B|3106|major histocompatibility complex, class I, B##AJ634528|HLA-B|3106|major histocompatibility complex, class I, B##D25275|HLA-B|3106|major histocompatibility complex, class I, B##D31816|HLA-B|3106|major histocompatibility complex, class I, B##D50290|HLA-B|3106|major histocompatibility complex, class I, B##D50292|HLA-B|3106|major histocompatibility complex, class I, B##D50294|HLA-B|3106|major histocompatibility complex, class I, B##D50295|HLA-B|3106|major histocompatibility complex, class I, B##D50300|HLA-B|3106|major histocompatibility complex, class I, B##D83043|HLA-B|3106|major histocompatibility complex, class I, B##L07743|HLA-B|3106|major histocompatibility complex, class I, B##L09736|HLA-B|3106|major histocompatibility complex, class I, B##L11603|HLA-B|3106|major histocompatibility complex, class I, B##L11604|HLA-B|3106|major histocompatibility complex, class I, B##L11666|HLA-B|3106|major histocompatibility complex, class I, B##L15005|HLA-B|3106|major histocompatibility complex, class I, B##L17005|HLA-B|3106|major histocompatibility complex, class I, B##L19937|HLA-B|3106|major histocompatibility complex, class I, B##L22027|HLA-B|3106|major histocompatibility complex, class I, B##L24373|HLA-B|3106|major histocompatibility complex, class I, B##L33922|HLA-B|3106|major histocompatibility complex, class I, B##L36591|HLA-B|3106|major histocompatibility complex, class I, B##L37880|HLA-B|3106|major histocompatibility complex, class I, B##L37881|HLA-B|3106|major histocompatibility complex, class I, B##L41925|HLA-B|3106|major histocompatibility complex, class I, B##L42345|HLA-B|3106|major histocompatibility complex, class I, B##M24033|HLA-B|3106|major histocompatibility complex, class I, B##M28205|HLA-B|3106|major histocompatibility complex, class I, B##M32317|HLA-B|3106|major histocompatibility complex, class I, B##M32319|HLA-B|3106|major histocompatibility complex, class I, B##M32320|HLA-B|3106|major histocompatibility complex, class I, B##M77774|HLA-B|3106|major histocompatibility complex, class I, B##M77776|HLA-B|3106|major histocompatibility complex, class I, B##M77778|HLA-B|3106|major histocompatibility complex, class I, B##M84380|HLA-B|3106|major histocompatibility complex, class I, B##M84382|HLA-B|3106|major histocompatibility complex, class I, B##U01848|HLA-B|3106|major histocompatibility complex, class I, B##U03027|HLA-B|3106|major histocompatibility complex, class I, B##U03859|HLA-B|3106|major histocompatibility complex, class I, B##U04244|HLA-B|3106|major histocompatibility complex, class I, B##U04245|HLA-B|3106|major histocompatibility complex, class I, B##U04787|HLA-B|3106|major histocompatibility complex, class I, B##U09864|HLA-B|3106|major histocompatibility complex, class I, B##U09912|HLA-B|3106|major histocompatibility complex, class I, B##U11262|HLA-B|3106|major histocompatibility complex, class I, B##U11264|HLA-B|3106|major histocompatibility complex, class I, B##U11265|HLA-B|3106|major histocompatibility complex, class I, B##U11266|HLA-B|3106|major histocompatibility complex, class I, B##U11268|HLA-B|3106|major histocompatibility complex, class I, B##U11269|HLA-B|3106|major histocompatibility complex, class I, B##U17107|HLA-B|3106|major histocompatibility complex, class I, B##U17572|HLA-B|3106|major histocompatibility complex, class I, B##U21052|HLA-B|3106|major histocompatibility complex, class I, B##U21053|HLA-B|3106|major histocompatibility complex, class I, B##U29057|HLA-B|3106|major histocompatibility complex, class I, B##U30904|HLA-B|3106|major histocompatibility complex, class I, B##U30936|HLA-B|3106|major histocompatibility complex, class I, B##U31971|HLA-B|3106|major histocompatibility complex, class I, B##U35431|HLA-B|3106|major histocompatibility complex, class I, B##U40498|HLA-B|3106|major histocompatibility complex, class I, B##U70528|HLA-B|3106|major histocompatibility complex, class I, B##U80945|HLA-B|3106|major histocompatibility complex, class I, B##U88407|HLA-B|3106|major histocompatibility complex, class I, B##X61708|HLA-B|3106|major histocompatibility complex, class I, B##X64454|HLA-B|3106|major histocompatibility complex, class I, B##X77658|HLA-B|3106|major histocompatibility complex, class I, B##X90390|HLA-B|3106|major histocompatibility complex, class I, B##X90391|HLA-B|3106|major histocompatibility complex, class I, B##X91749|HLA-B|3106|major histocompatibility complex, class I, B##Y13029|HLA-B|3106|major histocompatibility complex, class I, B##Y13567|HLA-B|3106|major histocompatibility complex, class I, B##Z15143|HLA-B|3106|major histocompatibility complex, class I, B##AF389378|HLA-B|3106|major histocompatibility complex, class I, B##BC091497|HLA-B|3106|major histocompatibility complex, class I, B##AY007140|HLA-B|3106|major histocompatibility complex, class I, B##BC013187|HLA-B|3106|major histocompatibility complex, class I, B##M16102|HLA-B|3106|major histocompatibility complex, class I, B##BC016929|MICA|100507436|MHC class I polypeptide-related sequence A##AK225393|MICA|100507436|MHC class I polypeptide-related sequence A##L14848|MICA|100507436|MHC class I polypeptide-related sequence A##NM_000247|MICA|100507436|MHC class I polypeptide-related sequence A##NM_001177519|MICA|100507436|MHC class I polypeptide-related sequence A##AK299135|MICA|100507436|MHC class I polypeptide-related sequence A##AB506764|MICA|100507436|MHC class I polypeptide-related sequence A##AY204547|MICA|100507436|MHC class I polypeptide-related sequence A##AY750850|MICA|100507436|MHC class I polypeptide-related sequence A##BX640979|HCP5|10866|HLA complex P5 (non-protein coding)##AK093953|HCP5|10866|HLA complex P5 (non-protein coding)##AK290875|HCP5|10866|HLA complex P5 (non-protein coding)##L06175|HCP5|10866|HLA complex P5 (non-protein coding)##BC106759|HCP5|10866|HLA complex P5 (non-protein coding)##BC113853|HCP5|10866|HLA complex P5 (non-protein coding)##BC114462|HCP5|10866|HLA complex P5 (non-protein coding)	0.99593	CTCF.p2:1:0.996
chr7	158488885	158489002	reg1020797.p1	6.634	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	-108490	-	TSC_hg19_v1_chr7_+_157647233 BC034557	-841669	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	-1359232	+	BC028618 TSC_hg19_v1_chr7_-_158497496 AK092008 AX747307 BC043404 BX537845 NM_017760	8534	-	TSC_hg19_v1_chr7_-_158611303 AK126214	122427	-	TSC_hg19_v1_chr7_-_158622198 AB033054	133248	-	DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034557|LOC100506585|100506585|uncharacterized LOC100506585##AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC028618|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK092008|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BC043404|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BX537845|NCAPG2|54892|non-SMC condensin II complex, subunit G2##NM_017760|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK126214|ESYT2|57488|extended synaptotagmin-like protein 2##AB033054|ESYT2|57488|extended synaptotagmin-like protein 2	0.913526	CTCF.p2:3:0.890
chr9	75437416	75437567	reg1021462.p2	6.634	+	AF417578 NM_138691	-300775	+	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	-457391	-	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	-457766	-	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	130454	-	NM_000689	130741	-	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	329287	+	AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1	0.286593	CTCF.p2:26:0.287
chr12	77082561	77082670	reg1021860.p2	6.633	+	TSC_hg19_v1_chr12_-_76953586 AF323730 AF392452 NM_001003712 NM_020841	-129007	-	TSC_hg19_v1_chr12_-_76953526 BC082235	-129084	-	BC111728 TSC_hg19_v1_chr12_-_76953484	-129132	-	TSC_hg19_v1_chr12_+_77157882 NM_015336 BC030990	75247	+	TSC_hg19_v1_chr12_+_77157894 BC050324 AB023163	75289	+	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	75411	+	AF323730|OSBPL8|114882|oxysterol binding protein-like 8##AF392452|OSBPL8|114882|oxysterol binding protein-like 8##NM_001003712|OSBPL8|114882|oxysterol binding protein-like 8##NM_020841|OSBPL8|114882|oxysterol binding protein-like 8##BC082235|OSBPL8|114882|oxysterol binding protein-like 8##BC111728|OSBPL8|114882|oxysterol binding protein-like 8##NM_015336|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC030990|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC050324|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB023163|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17	0.026758	
chr14	74505056	74505218	reg1024575.p1	6.633	+	TSC_hg19_v1_chr14_+_74486065 NM_025057 BC044808	-19052	+	TSC_hg19_v1_chr14_-_74485992 BC107878 NM_001249	-19211	-	AK302982 NM_152445	-88021	-	AF038011 TSC_hg19_v1_chr14_-_74551122 AF159889 CU678802 DQ892921 DQ893680 EU176729 AK223244 AJ249994 BC004909 AK222687 AF148505 AK312389 AK294243 AK311478	45978	-	TSC_hg19_v1_chr14_-_74551167 BC032371 NM_005589	46052	-	NM_001024674 AK307062 TSC_hg19_v1_chr14_+_74551662 AK055422 AK023979 BC009539	46531	+	NM_025057|C14orf45|80127|chromosome 14 open reading frame 45##BC044808|C14orf45|80127|chromosome 14 open reading frame 45##NM_001249|ENTPD5|957|ectonucleoside triphosphate diphosphohydrolase 5##AK302982|FAM161B|145483|family with sequence similarity 161, member B##NM_152445|FAM161B|145483|family with sequence similarity 161, member B##AF038011|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AF159889|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##DQ892921|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##DQ893680|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##EU176729|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK223244|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AJ249994|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##BC004909|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK222687|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AF148505|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK312389|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK294243|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK311478|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##BC032371|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##NM_005589|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##NM_001024674|LIN52|91750|lin-52 homolog (C. elegans)##AK307062|LIN52|91750|lin-52 homolog (C. elegans)##AK055422|LIN52|91750|lin-52 homolog (C. elegans)##AK023979|LIN52|91750|lin-52 homolog (C. elegans)##BC009539|LIN52|91750|lin-52 homolog (C. elegans)	0.99633	CTCF.p2:0:0.996
chr20	45114609	45114720	reg1022508.p1	6.633	+	AL831934 TSC_hg19_v1_chr20_-_45087948	-26733	-	TSC_hg19_v1_chr20_-_45061554 AK293861	-53036	-	TSC_hg19_v1_chr20_-_45035255 AK299318 AL833406 BX648819 NM_133171 NM_182764	-79365	-	AK001331 AK095611 BC024177 NM_018102 NM_199441 BC026321 TSC_hg19_v1_chr20_-_45142199	27531	-	NM_080721 TSC_hg19_v1_chr20_-_45179294	64589	-	DQ892655 DQ895894 AF154121 AY072810 AK293902 AK056713 AK295748 AK315131 BC035966 NM_001193339 NM_001193342 NM_022829 TSC_hg19_v1_chr20_-_45280099	165417	-	AL831934|ZNF663|100130934|zinc finger protein 663##AK293861|ELMO2|63916|engulfment and cell motility 2##AK299318|ELMO2|63916|engulfment and cell motility 2##AL833406|ELMO2|63916|engulfment and cell motility 2##BX648819|ELMO2|63916|engulfment and cell motility 2##NM_133171|ELMO2|63916|engulfment and cell motility 2##NM_182764|ELMO2|63916|engulfment and cell motility 2##AK001331|ZNF334|55713|zinc finger protein 334##AK095611|ZNF334|55713|zinc finger protein 334##BC024177|ZNF334|55713|zinc finger protein 334##NM_018102|ZNF334|55713|zinc finger protein 334##NM_199441|ZNF334|55713|zinc finger protein 334##BC026321|ZNF334|55713|zinc finger protein 334##NM_080721|C20orf123|128506|chromosome 20 open reading frame 123##DQ892655|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##DQ895894|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AF154121|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AY072810|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK293902|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK056713|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK295748|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK315131|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##BC035966|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193339|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193342|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_022829|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3	0.522341	CTCF.p2:-5:0.522
chr4	57826540	57826649	reg1019690.p1	6.633	+	TSC_hg19_v1_chr4_+_57775158 BC017822	-51425	+	AB209750 TSC_hg19_v1_chr4_+_57775136	-51463	+	TSC_hg19_v1_chr4_+_57775107 NM_001193508	-51504	+	AK098215 TSC_hg19_v1_chr4_-_57843766 DQ891859 DQ895048 AK074953	17152	-	TSC_hg19_v1_chr4_-_57843792 BC004894 NM_032313	17213	-	TSC_hg19_v1_chr4_+_57845029 AK294901 AK299090 AK295132 BC023503	18442	+	BC017822|REST|5978|RE1-silencing transcription factor##AB209750|REST|5978|RE1-silencing transcription factor##NM_001193508|REST|5978|RE1-silencing transcription factor##AK098215|NOA1|84273|nitric oxide associated 1##DQ891859|NOA1|84273|nitric oxide associated 1##DQ895048|NOA1|84273|nitric oxide associated 1##AK074953|NOA1|84273|nitric oxide associated 1##BC004894|NOA1|84273|nitric oxide associated 1##NM_032313|NOA1|84273|nitric oxide associated 1##AK294901|POLR2B|5431|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa##AK299090|POLR2B|5431|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa##AK295132|POLR2B|5431|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa##BC023503|POLR2B|5431|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa	1.319696	CTCF.p2:-8:0.997	CTCF.p2:45:0.323
chr9	72534522	72534634	reg1020900.p1	6.633	+	NM_001010940 BC150564 BC136709 BC144373 BC144374 BC144375	-98842	+	TSC_hg19_v1_chr9_-_72374870 AL832683 BC053622 NM_001099666	-159682	-	TSC_hg19_v1_chr9_-_72287241 AF029106 AF047347 NM_001163	-247374	-	BC040299 BC045569 NM_153267 BC063634	123929	+	AK304040 TSC_hg19_v1_chr9_+_72658764 BC016383 AK304531	124243	+	TSC_hg19_v1_chr9_-_72873739 CR936772 AK124136 BC040840	339186	-	NM_001010940|C9orf135|138255|chromosome 9 open reading frame 135##BC150564|C9orf135|138255|chromosome 9 open reading frame 135##BC136709|C9orf135|138255|chromosome 9 open reading frame 135##BC144373|C9orf135|138255|chromosome 9 open reading frame 135##BC144374|C9orf135|138255|chromosome 9 open reading frame 135##BC144375|C9orf135|138255|chromosome 9 open reading frame 135##AL832683|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##BC053622|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##NM_001099666|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##BC040299|MAMDC2|256691|MAM domain containing 2##BC045569|MAMDC2|256691|MAM domain containing 2##NM_153267|MAMDC2|256691|MAM domain containing 2##BC063634|MAMDC2|256691|MAM domain containing 2##AK304040|MAMDC2|256691|MAM domain containing 2##BC016383|MAMDC2|256691|MAM domain containing 2##AK304531|MAMDC2|256691|MAM domain containing 2##CR936772|LOC100507299|100507299|uncharacterized LOC100507299##AK124136|LOC100507299|100507299|uncharacterized LOC100507299##BC040840|LOC100507299|100507299|uncharacterized LOC100507299	0.972893	CTCF.p2:0:0.973
chr11	14991515	14991613	reg1020626.p1	6.632	+	AK054728 TSC_hg19_v1_chr11_+_14926557	-65015	+	AY323817 NM_024514 BC104907 BC104909	-77791	-	BC052580 BC111070 TSC_hg19_v1_chr11_-_14913218 AK312019 BC084557	-78330	-	M26095 X03662 M64486 BC093753 BC101599 BC143562 BC069684 BC069704 BC069760 BC069778 NM_001033952 NM_001033953 NM_001741 X00356	2256	-	BC008428 AK291188 BC092468 NM_000728	103562	+	AB236159 NM_001031853	142405	+	AK054728|CALCB|797|calcitonin-related polypeptide beta##AY323817|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##NM_024514|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104907|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104909|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC052580|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC111070|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##M26095|CALCA|796|calcitonin-related polypeptide alpha##X03662|CALCA|796|calcitonin-related polypeptide alpha##M64486|CALCA|796|calcitonin-related polypeptide alpha##BC093753|CALCA|796|calcitonin-related polypeptide alpha##BC101599|CALCA|796|calcitonin-related polypeptide alpha##BC143562|CALCA|796|calcitonin-related polypeptide alpha##BC069684|CALCA|796|calcitonin-related polypeptide alpha##BC069704|CALCA|796|calcitonin-related polypeptide alpha##BC069760|CALCA|796|calcitonin-related polypeptide alpha##BC069778|CALCA|796|calcitonin-related polypeptide alpha##NM_001033952|CALCA|796|calcitonin-related polypeptide alpha##NM_001033953|CALCA|796|calcitonin-related polypeptide alpha##NM_001741|CALCA|796|calcitonin-related polypeptide alpha##X00356|CALCA|796|calcitonin-related polypeptide alpha##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)	0.763334	CTCF.p2:-4:0.763
chr1	38276852	38276991	reg1024367.p1	6.632	+	AY517499 TSC_hg19_v1_chr1_+_38273967 BC107856 BC057819 AK127381 BC102041 BC127187 BC127188 BC141938	-3011	+	TSC_hg19_v1_chr1_-_38273855 AY172561 NM_024640 BC080186	-3050	-	TSC_hg19_v1_chr1_-_38273849 BC067857	-3073	-	TSC_hg19_v1_chr1_-_38325265 X78710 AK225923 AK298751 AK309584 AK314233 BC014454 NM_005955	48337	-	TSC_hg19_v1_chr1_-_38397424 AK022846	120514	-	TSC_hg19_v1_chr1_-_38412689 AL833055 BC058932	135761	-	AY517499|C1orf122|127687|chromosome 1 open reading frame 122##BC107856|C1orf122|127687|chromosome 1 open reading frame 122##BC057819|C1orf122|127687|chromosome 1 open reading frame 122##AK127381|C1orf122|127687|chromosome 1 open reading frame 122##BC102041|C1orf122|127687|chromosome 1 open reading frame 122##BC127187|C1orf122|127687|chromosome 1 open reading frame 122##BC127188|C1orf122|127687|chromosome 1 open reading frame 122##AY172561|YRDC|79693|yrdC domain containing (E. coli)##NM_024640|YRDC|79693|yrdC domain containing (E. coli)##BC080186|YRDC|79693|yrdC domain containing (E. coli)##BC067857|YRDC|79693|yrdC domain containing (E. coli)##X78710|MTF1|4520|metal-regulatory transcription factor 1##AK225923|MTF1|4520|metal-regulatory transcription factor 1##AK298751|MTF1|4520|metal-regulatory transcription factor 1##AK309584|MTF1|4520|metal-regulatory transcription factor 1##AK314233|MTF1|4520|metal-regulatory transcription factor 1##BC014454|MTF1|4520|metal-regulatory transcription factor 1##NM_005955|MTF1|4520|metal-regulatory transcription factor 1##AK022846|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##AL833055|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa##BC058932|INPP5B|3633|inositol polyphosphate-5-phosphatase, 75kDa	0.0	
chr1	50798750	50798890	reg1022055.p1	6.632	+	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-223282	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-224136	+	TSC_hg19_v1_chr1_+_50574591 NM_001144774 NM_021952	-224229	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	90291	-	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	626757	-	TSC_hg19_v1_chr1_-_51425740 BC067100	626936	-	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_032110|DMRTA2|63950|DMRT-like family A2##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.951506	CTCF.p2:28:0.952
chr3	46896341	46896450	reg1021904.p2	6.632	+	AJ544583 NM_182702 AB587436	-20811	-	BC133695 NM_199183	-110151	-	AK097666 NM_001205271	-118476	-	AF174483 CU679491 X07373 M24122 AK312044 BC009790 NM_000258	8530	-	BC112221 BC112247 NM_000316 U17418 X68596	22854	+	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	27347	+	AJ544583|PRSS42|339906|protease, serine, 42##NM_182702|PRSS42|339906|protease, serine, 42##BC133695|PRSS45|377047|protease, serine, 45##NM_199183|PRSS45|377047|protease, serine, 45##NM_001205271|PRSS46|100287362|protease, serine, 46##AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC112221|PTH1R|5745|parathyroid hormone 1 receptor##BC112247|PTH1R|5745|parathyroid hormone 1 receptor##NM_000316|PTH1R|5745|parathyroid hormone 1 receptor##U17418|PTH1R|5745|parathyroid hormone 1 receptor##X68596|PTH1R|5745|parathyroid hormone 1 receptor##BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor	0.158698	
chr6	123065530	123065668	reg1023935.p1	6.632	+	BC093027 TSC_hg19_v1_chr6_+_122931549 BC036011 AF087873 AK315151	-134019	+	NM_032471 NM_181795	-134223	+	NM_181794 CR749456 AJ420562	-272528	+	NM_001446 TSC_hg19_v1_chr6_+_123100743 BC012299	35100	+	AK311867 TSC_hg19_v1_chr6_+_123100861 AK289836 AK307272 AJ002962 AB208815 U51338 D50373 D88648 AL512688 U81235 CR457057 DQ891437 DQ894613 EU176601	35300	+	NM_006714	44371	+	BC093027|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##BC036011|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AF087873|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AK315151|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_032471|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_181795|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_181794|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AJ420562|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_001446|FABP7|2173|fatty acid binding protein 7, brain##BC012299|FABP7|2173|fatty acid binding protein 7, brain##AK311867|FABP7|2173|fatty acid binding protein 7, brain##AK289836|FABP7|2173|fatty acid binding protein 7, brain##AJ002962|FABP7|2173|fatty acid binding protein 7, brain##U51338|FABP7|2173|fatty acid binding protein 7, brain##D50373|FABP7|2173|fatty acid binding protein 7, brain##D88648|FABP7|2173|fatty acid binding protein 7, brain##AL512688|FABP7|2173|fatty acid binding protein 7, brain##U81235|FABP7|2173|fatty acid binding protein 7, brain##CR457057|FABP7|2173|fatty acid binding protein 7, brain##DQ891437|FABP7|2173|fatty acid binding protein 7, brain##DQ894613|FABP7|2173|fatty acid binding protein 7, brain##EU176601|FABP7|2173|fatty acid binding protein 7, brain##NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A	0.0	
chr15	51425228	51425328	reg1021054.p1	6.630	+	AY517501 NM_207381	-27806	-	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	-38428	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	-224351	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	205486	-	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	208516	+	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	489695	-	AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2	0.763573	CTCF.p2:0:0.753
chr6	43972985	43973099	reg1022162.p1	6.630	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	-4668	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-234172	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-234508	+	CR627460 TSC_hg19_v1_chr6_+_44094741	121656	+	TSC_hg19_v1_chr6_-_44095161 AK312086	122118	-	TSC_hg19_v1_chr6_-_44095190 NM_032111	122156	-	BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14##NM_032111|MRPL14|64928|mitochondrial ribosomal protein L14	0.142522	
chr11	58910079	58910176	reg1020285.p1	6.629	+	TSC_hg19_v1_chr11_+_58874641 BC062456 NM_001142703 NM_001142704 NM_198947 BC005998 AK304258 AY457926 AK303520	-35465	+	AK091965 AX747281 DQ084381 NM_001220496 NM_080661 AK055818	-199375	+	NM_001220494 AK300479 BC008353	-214990	+	TSC_hg19_v1_chr11_-_58910222 AK124475 BC028022	116	-	TSC_hg19_v1_chr11_+_58910331 AK092237 AX747422 NM_001142519 NM_001142520 NM_001142521	183	+	NM_022074 NM_198847 AK291453 BC071759 AK092061 AX747338	2152	+	BC062456|FAM111B|374393|family with sequence similarity 111, member B##NM_001142703|FAM111B|374393|family with sequence similarity 111, member B##NM_001142704|FAM111B|374393|family with sequence similarity 111, member B##NM_198947|FAM111B|374393|family with sequence similarity 111, member B##BC005998|FAM111B|374393|family with sequence similarity 111, member B##AK304258|FAM111B|374393|family with sequence similarity 111, member B##AY457926|FAM111B|374393|family with sequence similarity 111, member B##AK303520|FAM111B|374393|family with sequence similarity 111, member B##AK091965|GLYATL1|92292|glycine-N-acyltransferase-like 1##DQ084381|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220496|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_080661|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK055818|GLYATL1|92292|glycine-N-acyltransferase-like 1##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK092237|FAM111A|63901|family with sequence similarity 111, member A##NM_001142519|FAM111A|63901|family with sequence similarity 111, member A##NM_001142520|FAM111A|63901|family with sequence similarity 111, member A##NM_001142521|FAM111A|63901|family with sequence similarity 111, member A##NM_022074|FAM111A|63901|family with sequence similarity 111, member A##NM_198847|FAM111A|63901|family with sequence similarity 111, member A##AK291453|FAM111A|63901|family with sequence similarity 111, member A##BC071759|FAM111A|63901|family with sequence similarity 111, member A##AK092061|FAM111A|63901|family with sequence similarity 111, member A	0.134061	
chr12	66746123	66746241	reg1018742.p2	6.629	+	TSC_hg19_v1_chr12_+_66696305 NM_033647 BC143409 BC143411 AK290894 AK024464 AB527324 AF319995	-49853	+	BC069388 AK298645 TSC_hg19_v1_chr12_+_66583064 AB590803 CU691242	-163129	+	TSC_hg19_v1_chr12_+_66583004 AF113136	-163172	+	BC115393 BC115394 TSC_hg19_v1_chr12_-_67072757 AK307576	326574	-	TSC_hg19_v1_chr12_-_67072881 AK095519 NM_001178074 NM_021150	326720	-	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	916920	+	NM_033647|HELB|92797|helicase (DNA) B##BC143409|HELB|92797|helicase (DNA) B##BC143411|HELB|92797|helicase (DNA) B##AK290894|HELB|92797|helicase (DNA) B##AF319995|HELB|92797|helicase (DNA) B##BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC115393|GRIP1|23426|glutamate receptor interacting protein 1##BC115394|GRIP1|23426|glutamate receptor interacting protein 1##AK307576|GRIP1|23426|glutamate receptor interacting protein 1##AK095519|GRIP1|23426|glutamate receptor interacting protein 1##NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1##NM_021150|GRIP1|23426|glutamate receptor interacting protein 1##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1	0.99136	CTCF.p2:-9:0.991
chr15	33967583	33967716	reg1021380.p2	6.629	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	-364480	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-607414	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-956483	-	TSC_hg19_v1_chr15_-_34212524 BC037796	244909	-	AK095198 NM_012125	293439	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	363663	-	AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor	0.655139	CTCF.p2:-3:0.655
chrX	57182974	57183087	reg1021774.p1	6.629	+	BC071694 NM_019003	-18973	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	-35102	-	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	-161059	-	NM_174912 AK055766 BC073922 TSC_hg19_v1_chrX_+_57313185 CU687272 EU285560 BC048279	130185	+	NM_007157	435238	+	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	435430	+	BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##NM_174912|FAAH2|158584|fatty acid amide hydrolase 2##AK055766|FAAH2|158584|fatty acid amide hydrolase 2##BC073922|FAAH2|158584|fatty acid amide hydrolase 2##EU285560|FAAH2|158584|fatty acid amide hydrolase 2##BC048279|FAAH2|158584|fatty acid amide hydrolase 2##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B	0.837192	CTCF.p2:4:0.837
chr20	2327929	2328061	reg1021358.p2	6.628	+	NM_003245 AK298637 AK299447 AK308249 AK290324 AK291351 AK315236 L10386 BC109075 BC109076	-51346	+	TSC_hg19_v1_chr20_-_2083527 BC034792	-244469	-	BC140883 BC140884 TSC_hg19_v1_chr20_+_2083583 AB527968 AF195026 BC111573 BC017340 AK302629	-244480	+	AF540969 AF540970 NM_198994	33558	+	TSC_hg19_v1_chr20_-_2451416 X17568 X17567 BC080516	123395	-	TSC_hg19_v1_chr20_-_2451436 AK301034 AK312620 AK301206 AK307093 AK307266	123437	-	NM_003245|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK298637|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK299447|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK308249|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK290324|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291351|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK315236|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##L10386|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109075|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109076|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC140883|STK35|140901|serine/threonine kinase 35##BC140884|STK35|140901|serine/threonine kinase 35##AF195026|STK35|140901|serine/threonine kinase 35##BC111573|STK35|140901|serine/threonine kinase 35##BC017340|STK35|140901|serine/threonine kinase 35##AK302629|STK35|140901|serine/threonine kinase 35##AF540969|TGM6|343641|transglutaminase 6##AF540970|TGM6|343641|transglutaminase 6##NM_198994|TGM6|343641|transglutaminase 6##X17568|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##X17567|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##BC080516|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK301034|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK312620|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK301206|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK307093|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1	0.372804	CTCF.p2:11:0.373
chr22	30123343	30123419	reg1017533.p1	6.628	+	TSC_hg19_v1_chr22_+_30116288 BC051805 NM_182527 HQ257899	-7031	+	BC020257 TSC_hg19_v1_chr22_+_29999653 BC003112 L11353 Z22664 CR456530 AF122827 AF122828 AF123570 AB587384 CU013130 CU013418 DQ891697 DQ894878 AF369661 AF369662 AF369663 AF369664 AF369665 AF369666 AF369667 AF369668 EF517524 S73853	-123517	+	TSC_hg19_v1_chr22_+_29999621 AF369701	-123767	+	BC009717 TSC_hg19_v1_chr22_-_30162985 AK292671 NM_001003692 NM_019103	39579	-	TSC_hg19_v1_chr22_-_30162997 AK123261	39614	-	AF161536 TSC_hg19_v1_chr22_+_30163357 AB028598 BC005402 NM_001003684 NM_013387 AF161500 BC015971 AK225973 AF112217 AF161468	39988	+	BC051805|CABP7|164633|calcium binding protein 7##NM_182527|CABP7|164633|calcium binding protein 7##HQ257899|CABP7|164633|calcium binding protein 7##BC020257|NF2|4771|neurofibromin 2 (merlin)##BC003112|NF2|4771|neurofibromin 2 (merlin)##L11353|NF2|4771|neurofibromin 2 (merlin)##Z22664|NF2|4771|neurofibromin 2 (merlin)##CR456530|NF2|4771|neurofibromin 2 (merlin)##AF122827|NF2|4771|neurofibromin 2 (merlin)##AF122828|NF2|4771|neurofibromin 2 (merlin)##AF123570|NF2|4771|neurofibromin 2 (merlin)##CU013130|NF2|4771|neurofibromin 2 (merlin)##CU013418|NF2|4771|neurofibromin 2 (merlin)##DQ891697|NF2|4771|neurofibromin 2 (merlin)##DQ894878|NF2|4771|neurofibromin 2 (merlin)##AF369661|NF2|4771|neurofibromin 2 (merlin)##AF369662|NF2|4771|neurofibromin 2 (merlin)##AF369663|NF2|4771|neurofibromin 2 (merlin)##AF369664|NF2|4771|neurofibromin 2 (merlin)##AF369665|NF2|4771|neurofibromin 2 (merlin)##AF369666|NF2|4771|neurofibromin 2 (merlin)##AF369667|NF2|4771|neurofibromin 2 (merlin)##AF369668|NF2|4771|neurofibromin 2 (merlin)##EF517524|NF2|4771|neurofibromin 2 (merlin)##S73853|NF2|4771|neurofibromin 2 (merlin)##AF369701|NF2|4771|neurofibromin 2 (merlin)##BC009717|ZMAT5|55954|zinc finger, matrin-type 5##AK292671|ZMAT5|55954|zinc finger, matrin-type 5##NM_001003692|ZMAT5|55954|zinc finger, matrin-type 5##NM_019103|ZMAT5|55954|zinc finger, matrin-type 5##AF161536|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AB028598|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##BC005402|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##NM_001003684|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##NM_013387|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AF161500|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##BC015971|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AK225973|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AF112217|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AF161468|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X	0.0	
chr10	5024392	5024527	reg1022834.p1	6.627	+	D26124 TSC_hg19_v1_chr10_+_5005695	-18769	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	-18836	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	-18945	+	M33376 TSC_hg19_v1_chr10_-_5046050 AB021654 AB031084 BT006653 CU675503 DQ890680 DQ893862 S68330 BC007024 U05598 AK296419 AK308385 AK296686 NM_001135241 AK290304 AB209017	21571	-	BC063574 AK091194 NM_001354 NM_205845	35739	-	TSC_hg19_v1_chr10_+_5136567 NM_003739 BC001479 D17793	112111	+	D26124|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M33376|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AB021654|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AB031084|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##BT006653|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##DQ890680|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##DQ893862|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##S68330|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##BC007024|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##U05598|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AK296419|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AK308385|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AK296686|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##NM_001135241|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AK290304|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AB209017|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##BC063574|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##AK091194|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##NM_001354|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##NM_205845|AKR1C2|1646|aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III)##NM_003739|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##BC001479|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##D17793|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)	0.396327	CTCF.p2:6:0.396
chr1	39595281	39595405	reg1021718.p1	6.627	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-48255	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	-103335	+	TSC_hg19_v1_chr1_+_39456956 NM_001136275 NM_024595 AK022728 AK092624 AX747634 AK124799 AK126262 AK223276 AK298890 AK303098 BC001498 BC119745 BC119746 AY326465	-138281	+	NM_015038	279832	+	TSC_hg19_v1_chr1_+_39922264 AK023821	326976	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	362002	+	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_001136275|AKIRIN1|79647|akirin 1##NM_024595|AKIRIN1|79647|akirin 1##AK022728|AKIRIN1|79647|akirin 1##AK092624|AKIRIN1|79647|akirin 1##AK124799|AKIRIN1|79647|akirin 1##AK126262|AKIRIN1|79647|akirin 1##AK223276|AKIRIN1|79647|akirin 1##AK298890|AKIRIN1|79647|akirin 1##AK303098|AKIRIN1|79647|akirin 1##BC001498|AKIRIN1|79647|akirin 1##BC119745|AKIRIN1|79647|akirin 1##BC119746|AKIRIN1|79647|akirin 1##AY326465|AKIRIN1|79647|akirin 1##NM_015038|KIAA0754|643314|KIAA0754##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a	0.887216	CTCF.p2:5:0.887
chr2	210072979	210073097	reg1021032.p1	6.627	+	BC036811 NM_005048 U25128 HQ257935 AY497546	-801377	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-848413	+	TSC_hg19_v1_chr2_+_209131083 AK127769	-941955	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	215716	+	BC110423 TSC_hg19_v1_chr2_+_210444185	371132	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	371356	+	BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##AK294181|PTH2R|5746|parathyroid hormone 2 receptor##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC110423|MAP2|4133|microtubule-associated protein 2##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2	0.0	
chr6	43970642	43970724	reg1019386.p1	6.627	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	-2309	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-231813	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-232149	+	CR627460 TSC_hg19_v1_chr6_+_44094741	124015	+	TSC_hg19_v1_chr6_-_44095161 AK312086	124477	-	TSC_hg19_v1_chr6_-_44095190 NM_032111	124515	-	BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14##NM_032111|MRPL14|64928|mitochondrial ribosomal protein L14	0.0	
chr3	196729715	196729820	reg1018422.p1	6.626	+	TSC_hg19_v1_chr3_-_196695705 BC018804 BC044640 AK022830 NM_025163	-34089	-	TSC_hg19_v1_chr3_+_196669559 AL832915 BC000257 BC007882	-60196	+	TSC_hg19_v1_chr3_+_196669529 BC062368 AK123020	-60257	+	BC032042 TSC_hg19_v1_chr3_+_196729798	43	+	BT007377 AB527337 M12154 BC093920 BC111947 BC143257 BC002623 BC001875 BC007550 BC053510 BC071910 TSC_hg19_v1_chr3_-_196756658 BC032752	26856	-	TSC_hg19_v1_chr3_-_196756689 NM_033316 NM_005929	26935	-	BC018804|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##BC044640|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##AK022830|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##NM_025163|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##AL832915|LOC152217|152217|uncharacterized LOC152217##BC000257|LOC152217|152217|uncharacterized LOC152217##BC007882|LOC152217|152217|uncharacterized LOC152217##BC062368|LOC152217|152217|uncharacterized LOC152217##AK123020|LOC152217|152217|uncharacterized LOC152217##BC032042|MFI2-AS1|100507057|MFI2 antisense RNA 1 (non-protein coding)##BT007377|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##M12154|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC093920|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC111947|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC143257|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC002623|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC001875|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC007550|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC053510|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC071910|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC032752|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_033316|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_005929|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5	0.923796	CTCF.p2:3:0.924
chr15	33314132	33314282	reg1021643.p2	6.625	+	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-303041	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-303950	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	-380293	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	46028	-	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	288962	+	TSC_hg19_v1_chr15_-_34212524 BC037796	898351	-	AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3	0.982092	CTCF.p2:-15:0.982
chr6	32590317	32590458	reg1019567.p1	6.625	+	AF010142 M16954 M16955 M16956 M16957 M16958 M16959 M17377 M17378 U31770 U17380 U17379 D86415 X99896 M28584 M30180 AF490771 AJ297582 AJ297583 AJ297584 AJ297585 AJ297587 AJ302075 AY626551 AY770514 AY935719 AY961062 AY961063 AY961064 AY961065 AY961066 AY961067 AY961069 AY961070 AY961071 AY961072 AY961073 AY961074 AY961076 AY961077 AY961078 DQ002917 DQ090958 EU375850 GQ891551 HM067843 HM067844 HM067847 HM067848 HM067849 HM067850 HM067852 HM067853 HM067854 HM067855 HM067856 HM067857 HM067858 HM067859 HM067860 HM067861 HM067862 HM067863 HM627215 M11161 M30179 AB528619 CU678949 CU689080 L02545 X99895 U84892 AJ697892 AJ697893 U95989 BC171883 M11867 M20504 M28583 L76133 U65585 BC033827 M20430 AB062112 M26038 BC007920 TSC_hg19_v1_chr6_-_32557583 M33600 BC108922 X12544 AK291499 X03069 AK225683 AK225690 AK289463 AK290388 BC008403 BC031023 AK291987 NM_001243965 NM_002124 AK293020	-32859	-	AF017439 TSC_hg19_v1_chr6_-_32552033 U56640 AF436097 U83583 U83584 U95818 M21008 AM056024	-38314	-	U17380 M30181 AB463852 M20429 NM_002125 BC009234 AK314834 TSC_hg19_v1_chr6_-_32498065 M57648 M32578 M20503	-92370	-	AK130811 AK313975 NM_002122 TSC_hg19_v1_chr6_+_32605182 BC073977 BC051832 AB209628 X00452 L46875 L46876 L46877 L46878 L46879 L46880 L46881 U77589 M34996 M20431 L34082 L34083 L34084 L34085 L34090 L34094 M59802	14856	+	L34097 L34098 L34101 L34102 L34103 L34105 L34106 L34107 L40180 L42626 M17207 M22550 M59800 M59801 U66400 M17565 X00369 M35982 M57649 AF000447 U83585 AF291674 AY656681 M16996 X96420 M17563 M17564 AF522251 AB209580 TSC_hg19_v1_chr6_-_32634435 AK295476 AK295695 M60028 M20432 AK296613 AK316333 M25327 X03068 NM_001243961 NM_002123 M16276	44053	-	NM_020056 TSC_hg19_v1_chr6_+_32709167 L34094	118838	+	AF010142|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M16954|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M16955|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M16956|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M16957|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M16958|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M16959|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M17377|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M17378|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##U31770|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##U17379|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##D86415|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M28584|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M30180|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AF490771|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AJ297582|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AJ297583|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AJ297585|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AJ297587|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY626551|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY770514|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY935719|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961062|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961063|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961064|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AY961065|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961066|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961067|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AY961070|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AY961072|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961073|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961076|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961077|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961078|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##DQ002917|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##DQ090958|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M11161|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M30179|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##L02545|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##X99895|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AJ697892|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AJ697893|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M11867|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M20504|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M28583|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##L76133|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##U65585|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC033827|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M20430|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AB062112|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M26038|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC007920|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M33600|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC108922|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AK291499|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##X03069|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AK225683|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AK225690|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AK289463|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC008403|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC031023|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AK291987|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##NM_001243965|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##NM_002124|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AK293020|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AF017439|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##U56640|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AF436097|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##U95818|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M21008|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M30181|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M20429|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##NM_002125|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##BC009234|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AK314834|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M57648|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M32578|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M20503|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AK130811|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##AK313975|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##NM_002122|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##BC073977|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##BC051832|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##AB209628|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##X00452|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L46875|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##U77589|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##M34996|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##M20431|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34082|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34083|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34084|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34085|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34090|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34094|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##M59802|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34097|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34098|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34101|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34102|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34103|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34105|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34106|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34107|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L40180|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L42626|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M17207|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M22550|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M59800|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M59801|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##U66400|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M17565|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##X00369|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M35982|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M57649|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AF000447|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##U83585|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AF291674|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AY656681|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M16996|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##X96420|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M17563|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M17564|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AB209580|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK295476|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK295695|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M60028|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M20432|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK296613|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK316333|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M25327|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##X03068|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##NM_001243961|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##NM_002123|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M16276|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##NM_020056|HLA-DQA2|3118|major histocompatibility complex, class II, DQ alpha 2##L34094|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1	0.559377	CTCF.p2:21:0.559
chr12	78575464	78575598	reg1023898.p1	6.624	+	NM_014903 AJ488201	-350399	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-1116242	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-1302748	-	AK094616 NM_001135805	682241	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	682944	+	TSC_hg19_v1_chr12_+_79258517 BX647240	683005	+	NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I##BX647240|SYT1|6857|synaptotagmin I	0.547329	CTCF.p2:-5:0.547
chr20	16222759	16222882	reg1022679.p1	6.624	+	BC018687 NM_001033087	-1045317	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-1904564	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-2246484	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	331193	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	487843	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	506201	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	0.0	
chr3	44571552	44571689	reg1024882.p1	6.624	+	TSC_hg19_v1_chr3_-_44552121 AK296954	-19497	-	TSC_hg19_v1_chr3_-_44552109 BC014381	-19524	-	TSC_hg19_v1_chr3_-_44519163 AY295873 NM_181489	-52461	-	TSC_hg19_v1_chr3_+_44596684 AK291285 AY280798 NM_018651 NM_025169 BC063020 AK022800 BC010555	25052	+	TSC_hg19_v1_chr3_+_44626458 AK094189 NM_173658	54836	+	TSC_hg19_v1_chr3_+_44666527 AY279353 NM_001024855 NM_006991 AK314196 AY074878 BC031209	94923	+	AK296954|ZNF852|285346|zinc finger protein 852##BC014381|ZNF852|285346|zinc finger protein 852##AY295873|ZNF445|353274|zinc finger protein 445##NM_181489|ZNF445|353274|zinc finger protein 445##AK291285|ZNF167|55888|zinc finger protein 167##AY280798|ZNF167|55888|zinc finger protein 167##NM_018651|ZNF167|55888|zinc finger protein 167##NM_025169|ZNF167|55888|zinc finger protein 167##BC063020|ZNF167|55888|zinc finger protein 167##AK022800|ZNF167|55888|zinc finger protein 167##BC010555|ZNF167|55888|zinc finger protein 167##AK094189|ZNF660|285349|zinc finger protein 660##NM_173658|ZNF660|285349|zinc finger protein 660##AY279353|ZNF197|10168|zinc finger protein 197##NM_001024855|ZNF197|10168|zinc finger protein 197##NM_006991|ZNF197|10168|zinc finger protein 197##AK314196|ZNF197|10168|zinc finger protein 197##AY074878|ZNF197|10168|zinc finger protein 197##BC031209|ZNF197|10168|zinc finger protein 197	0.998531	CTCF.p2:0:0.999
chrX	84339948	84340057	reg1020390.p1	6.624	+	AK130506 NM_198450 AY358193 BC107095 BC107096 CR749250	-81135	+	BC101720 BC101722 BC143522 BX538112 AK055240 AK290050 BX649166 NM_001177478 NM_001177479 NM_144657	-582560	-	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	-897030	-	NM_001012980	23971	-	TSC_hg19_v1_chrX_+_84498996 NM_021998	158995	+	BC006349 TSC_hg19_v1_chrX_+_84499121 AK308097	159084	+	AK130506|APOOL|139322|apolipoprotein O-like##NM_198450|APOOL|139322|apolipoprotein O-like##AY358193|APOOL|139322|apolipoprotein O-like##BC107095|APOOL|139322|apolipoprotein O-like##BC107096|APOOL|139322|apolipoprotein O-like##CR749250|APOOL|139322|apolipoprotein O-like##BC101720|HDX|139324|highly divergent homeobox##BC101722|HDX|139324|highly divergent homeobox##BC143522|HDX|139324|highly divergent homeobox##BX538112|HDX|139324|highly divergent homeobox##AK055240|HDX|139324|highly divergent homeobox##AK290050|HDX|139324|highly divergent homeobox##BX649166|HDX|139324|highly divergent homeobox##NM_001177478|HDX|139324|highly divergent homeobox##NM_001177479|HDX|139324|highly divergent homeobox##NM_144657|HDX|139324|highly divergent homeobox##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_001012980|SATL1|340562|spermidine/spermine N1-acetyl transferase-like 1##NM_021998|ZNF711|7552|zinc finger protein 711##BC006349|ZNF711|7552|zinc finger protein 711##AK308097|ZNF711|7552|zinc finger protein 711	0.999561	CTCF.p2:-12:1.000
chr14	68943347	68943527	reg1022538.p2	6.623	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-656917	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-660138	-	AK315462 NM_152443	-774835	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	316283	-	NM_001244698 NM_004926	317193	-	NM_001244701 AB528867	319547	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr18	56735227	56735339	reg1020186.p1	6.623	+	TSC_hg19_v1_chr18_+_56531281 BC036366	-203934	+	TSC_hg19_v1_chr18_+_56530714 AB046849	-204428	+	NM_018181 AF295077 BC130618 BC130620	-205164	+	TSC_hg19_v1_chr18_+_56807119 AK314107 AF212233 AK311213 NM_033280 AK295346 AK307127 BC009703 CU679449	71864	+	TSC_hg19_v1_chr18_+_56887389 AK307264 BC004488 NM_001012512 NM_001012513 NM_002091 K02054 DQ893451 DQ896223 AB528662 AB102889 BT006803	152160	+	BC051901 AF115392 NM_013435 AB593018	205371	-	BC036366|ZNF532|55205|zinc finger protein 532##AB046849|ZNF532|55205|zinc finger protein 532##NM_018181|ZNF532|55205|zinc finger protein 532##AF295077|ZNF532|55205|zinc finger protein 532##BC130618|ZNF532|55205|zinc finger protein 532##BC130620|ZNF532|55205|zinc finger protein 532##AK314107|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AF212233|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##NM_033280|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK295346|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307127|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##BC009703|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307264|GRP|2922|gastrin-releasing peptide##BC004488|GRP|2922|gastrin-releasing peptide##NM_001012512|GRP|2922|gastrin-releasing peptide##NM_001012513|GRP|2922|gastrin-releasing peptide##NM_002091|GRP|2922|gastrin-releasing peptide##K02054|GRP|2922|gastrin-releasing peptide##DQ893451|GRP|2922|gastrin-releasing peptide##DQ896223|GRP|2922|gastrin-releasing peptide##AB102889|GRP|2922|gastrin-releasing peptide##BT006803|GRP|2922|gastrin-releasing peptide##BC051901|RAX|30062|retina and anterior neural fold homeobox##AF115392|RAX|30062|retina and anterior neural fold homeobox##NM_013435|RAX|30062|retina and anterior neural fold homeobox##AB593018|RAX|30062|retina and anterior neural fold homeobox	0.421425	CTCF.p2:16:0.421
chr21	34807193	34807373	reg1020172.p1	6.623	+	TSC_hg19_v1_chr21_-_34787167 DQ655977	-20075	-	TSC_hg19_v1_chr21_+_34775780 AB463788 DQ892320 DQ895522	-31470	+	AK314005 TSC_hg19_v1_chr21_+_34775746 AK292246	-31535	+	TSC_hg19_v1_chr21_-_34852209 AK310701	44904	-	TSC_hg19_v1_chr21_-_34852239 AY358634 BC000569 AK309977 BX537378 AF045606	44966	-	TSC_hg19_v1_chr21_-_34852282 NM_006134 DQ656043	45016	-	DQ892320|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##DQ895522|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK314005|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK292246|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK310701|TMEM50B|757|transmembrane protein 50B##AY358634|TMEM50B|757|transmembrane protein 50B##BC000569|TMEM50B|757|transmembrane protein 50B##AK309977|TMEM50B|757|transmembrane protein 50B##AF045606|TMEM50B|757|transmembrane protein 50B##NM_006134|TMEM50B|757|transmembrane protein 50B##DQ656043|TMEM50B|757|transmembrane protein 50B	0.0	
chr3	140617310	140617411	reg1019974.p1	6.623	+	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	-220401	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-963108	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-963342	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	43407	+	TSC_hg19_v1_chr3_+_140770412 BC051354	153118	+	AF403029 BC008324 NM_080862 AK056367	153397	+	NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.95753	CTCF.p2:8:0.597	CTCF.p2:-74:0.361
chr6	48055342	48055473	reg1020792.p2	6.623	+	BC136779 AK123835 AK299301 NM_001013732 NM_207499	-19003	-	BC126194 BC126198 NM_181744 AY377391 AY288419 HQ258199	-305619	+	AK095395 NM_153838 DQ315370	-389113	+	TSC_hg19_v1_chr6_-_48078931 AK300335	23518	-	M65131 BC016282 TSC_hg19_v1_chr6_-_49430938 BX647789 AK312611 AK292568 NM_000255	1375538	-	AK293016 NM_018132 BC016279 TSC_hg19_v1_chr6_+_49431119	1375697	+	BC136779|C6orf138|442213|chromosome 6 open reading frame 138##AK123835|C6orf138|442213|chromosome 6 open reading frame 138##AK299301|C6orf138|442213|chromosome 6 open reading frame 138##NM_001013732|C6orf138|442213|chromosome 6 open reading frame 138##NM_207499|C6orf138|442213|chromosome 6 open reading frame 138##BC126194|OPN5|221391|opsin 5##BC126198|OPN5|221391|opsin 5##NM_181744|OPN5|221391|opsin 5##AY377391|OPN5|221391|opsin 5##AY288419|OPN5|221391|opsin 5##HQ258199|OPN5|221391|opsin 5##AK095395|GPR115|221393|G protein-coupled receptor 115##NM_153838|GPR115|221393|G protein-coupled receptor 115##DQ315370|GPR115|221393|G protein-coupled receptor 115##AK300335|C6orf138|442213|chromosome 6 open reading frame 138##M65131|MUT|4594|methylmalonyl CoA mutase##BC016282|MUT|4594|methylmalonyl CoA mutase##BX647789|MUT|4594|methylmalonyl CoA mutase##AK312611|MUT|4594|methylmalonyl CoA mutase##AK292568|MUT|4594|methylmalonyl CoA mutase##NM_000255|MUT|4594|methylmalonyl CoA mutase##AK293016|CENPQ|55166|centromere protein Q##NM_018132|CENPQ|55166|centromere protein Q##BC016279|CENPQ|55166|centromere protein Q	0.996871	CTCF.p2:-14:0.997
chr7	32805385	32805536	reg1023585.p1	6.623	+	TSC_hg19_v1_chr7_+_32767741 AK094370 BC126382 BC126384	-37722	+	TSC_hg19_v1_chr7_+_32535168 AK090619 AX746537 NM_015060 BC027724 CU693288	-270230	+	TSC_hg19_v1_chr7_+_32535132 AL833560	-270365	+	AK292802 BC047107 TSC_hg19_v1_chr7_-_32931241	125801	-	TSC_hg19_v1_chr7_-_32931372 BC037887	125909	-	TSC_hg19_v1_chr7_-_32931481 NM_015483	125991	-	AK094370|ZNRF2P1|441208|zinc and ring finger 2 pseudogene 1##BC126382|ZNRF2P1|441208|zinc and ring finger 2 pseudogene 1##BC126384|ZNRF2P1|441208|zinc and ring finger 2 pseudogene 1##AK090619|AVL9|23080|AVL9 homolog (S. cerevisiase)##NM_015060|AVL9|23080|AVL9 homolog (S. cerevisiase)##BC027724|AVL9|23080|AVL9 homolog (S. cerevisiase)##AL833560|AVL9|23080|AVL9 homolog (S. cerevisiase)##AK292802|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##BC047107|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##BC037887|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2##NM_015483|KBTBD2|25948|kelch repeat and BTB (POZ) domain containing 2	0.998255	CTCF.p2:-4:0.998
chr1	80683909	80684046	reg1023276.p1	6.622	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-1211550	-	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-1568479	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	-1597846	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	1087950	+	AF104266 AF104938 AF104939 NM_012302	1582104	+	AK097722 TSC_hg19_v1_chr1_-_84326308	3642291	-	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.744238	CTCF.p2:11:0.744
chr9	38672475	38672607	reg1021822.p1	6.622	+	TSC_hg19_v1_chr9_-_38620602 BC056266	-51918	-	AB385522 AB095935 BC152434 NM_147195	-52220	-	TSC_hg19_v1_chr9_-_38424452 AB463783 NM_001007563	-248076	-	AB385498 AK294281 AB051501 BC132737 BC144130 AK056833 NM_033655	615639	-	AK302569 NM_001040065 NM_001085452 BC146855	683144	+	AK302569 NM_001040065 NM_001085452 BC146855	1212420	+	BC056266|ANKRD18A|253650|ankyrin repeat domain 18A##AB095935|ANKRD18A|253650|ankyrin repeat domain 18A##BC152434|ANKRD18A|253650|ankyrin repeat domain 18A##NM_147195|ANKRD18A|253650|ankyrin repeat domain 18A##NM_001007563|IGFBPL1|347252|insulin-like growth factor binding protein-like 1##AK294281|CNTNAP3|79937|contactin associated protein-like 3##AB051501|CNTNAP3|79937|contactin associated protein-like 3##BC132737|CNTNAP3|79937|contactin associated protein-like 3##BC144130|CNTNAP3|79937|contactin associated protein-like 3##AK056833|CNTNAP3|79937|contactin associated protein-like 3##NM_033655|CNTNAP3|79937|contactin associated protein-like 3##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2	0.996004	CTCF.p2:-5:0.996
chr7	148892503	148892668	reg1019658.p2	6.621	+	TSC_hg19_v1_chr7_+_148844772 AY049744 AB527270 CU692152	-47826	+	TSC_hg19_v1_chr7_+_148844532 AK026380 NM_170686 BC043295 AK290499	-48056	+	TSC_hg19_v1_chr7_+_148823499 AY049743 NM_020781	-69083	+	D30612 TSC_hg19_v1_chr7_+_148892683 NM_003575 AK299280 BC073805 AK316282 AB587508 BC055287 BC041704	104	+	TSC_hg19_v1_chr7_+_148936741 AK074821 NM_012256 BC022785 EU446738 CU692712	44209	+	TSC_hg19_v1_chr7_+_148959286 AK131504 NM_001195220 BC131569 AB528912	66735	+	AY049744|ZNF398|57541|zinc finger protein 398##AK026380|ZNF398|57541|zinc finger protein 398##NM_170686|ZNF398|57541|zinc finger protein 398##BC043295|ZNF398|57541|zinc finger protein 398##AK290499|ZNF398|57541|zinc finger protein 398##AY049743|ZNF398|57541|zinc finger protein 398##NM_020781|ZNF398|57541|zinc finger protein 398##D30612|ZNF282|8427|zinc finger protein 282##NM_003575|ZNF282|8427|zinc finger protein 282##AK299280|ZNF282|8427|zinc finger protein 282##BC073805|ZNF282|8427|zinc finger protein 282##AK316282|ZNF282|8427|zinc finger protein 282##BC055287|ZNF282|8427|zinc finger protein 282##BC041704|ZNF282|8427|zinc finger protein 282##AK074821|ZNF212|7988|zinc finger protein 212##NM_012256|ZNF212|7988|zinc finger protein 212##BC022785|ZNF212|7988|zinc finger protein 212##EU446738|ZNF212|7988|zinc finger protein 212##NM_001195220|ZNF783|100289678|zinc finger family member 783	0.039064	
chr9	72728460	72728589	reg1022966.p1	6.621	+	AK304040 TSC_hg19_v1_chr9_+_72658764 BC016383 AK304531	-69703	+	BC040299 BC045569 NM_153267 BC063634	-70017	+	NM_001010940 BC150564 BC136709 BC144373 BC144374 BC144375	-292788	+	TSC_hg19_v1_chr9_-_72873739 CR936772 AK124136 BC040840	145240	-	TSC_hg19_v1_chr9_+_72873893 AK304133 NM_015110	145336	+	BC038225 TSC_hg19_v1_chr9_+_72873908 BC017666 AB011166 AK055825	145414	+	AK304040|MAMDC2|256691|MAM domain containing 2##BC016383|MAMDC2|256691|MAM domain containing 2##AK304531|MAMDC2|256691|MAM domain containing 2##BC040299|MAMDC2|256691|MAM domain containing 2##BC045569|MAMDC2|256691|MAM domain containing 2##NM_153267|MAMDC2|256691|MAM domain containing 2##BC063634|MAMDC2|256691|MAM domain containing 2##NM_001010940|C9orf135|138255|chromosome 9 open reading frame 135##BC150564|C9orf135|138255|chromosome 9 open reading frame 135##BC136709|C9orf135|138255|chromosome 9 open reading frame 135##BC144373|C9orf135|138255|chromosome 9 open reading frame 135##BC144374|C9orf135|138255|chromosome 9 open reading frame 135##BC144375|C9orf135|138255|chromosome 9 open reading frame 135##CR936772|LOC100507299|100507299|uncharacterized LOC100507299##AK124136|LOC100507299|100507299|uncharacterized LOC100507299##BC040840|LOC100507299|100507299|uncharacterized LOC100507299##AK304133|SMC5|23137|structural maintenance of chromosomes 5##NM_015110|SMC5|23137|structural maintenance of chromosomes 5##BC038225|SMC5|23137|structural maintenance of chromosomes 5##BC017666|SMC5|23137|structural maintenance of chromosomes 5##AB011166|SMC5|23137|structural maintenance of chromosomes 5##AK055825|SMC5|23137|structural maintenance of chromosomes 5	0.253537	CTCF.p2:1:0.254
chr10	73423871	73423961	reg1019444.p1	6.620	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	-267178	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-344870	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-344891	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	55676	-	AK074172 NM_001168390	73664	-	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	109390	-	BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54	0.993826	CTCF.p2:0:0.994
chr14	42579486	42579588	reg1018456.p1	6.620	+	NM_152447 AK096627	-502770	+	BC053537 BC068566 BC030611 NM_203301	-2677876	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-2678180	-	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	2396938	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	2786961	+	BC121009 BC121010 TSC_hg19_v1_chr14_-_45431102	2851559	-	NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28##BC121009|KLHL28|54813|kelch-like 28 (Drosophila)##BC121010|KLHL28|54813|kelch-like 28 (Drosophila)	0.911143	CTCF.p2:-6:0.911
chr6_mcf_hap5	4786861	4786988	reg1024923.p1	6.620	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.028597	
chr17	20847704	20847832	reg1021765.p1	6.619	+	CU686685 BC068597 NM_001004306	-48376	-	AK057473 TSC_hg19_v1_chr17_+_20771859 BC041488 EF565107	-75963	+	NM_001190790	-364732	+	TSC_hg19_v1_chr17_-_20946322 AB590105 AB028986 NM_015276	98504	-	TSC_hg19_v1_chr17_+_20978860 AB593144	131113	+	TSC_hg19_v1_chr17_+_21030251 NM_015510 AL117567 AF151851 BC004126 BC009679 AK124055 CR457124	182508	+	BC068597|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001004306|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2##AB028986|USP22|23326|ubiquitin specific peptidase 22##NM_015276|USP22|23326|ubiquitin specific peptidase 22##NM_015510|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AL117567|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AF151851|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC004126|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC009679|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AK124055|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##CR457124|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	0.025734	
chr17	43209325	43209420	reg1017296.p1	6.619	+	TSC_hg19_v1_chr17_+_43138687 BC006538 BC006569 NM_021079 AF043324 AK291936 AK303517 AB527516 BC008579 AF020500	-70680	+	TSC_hg19_v1_chr17_+_43138673 Y17208 Y17209	-70715	+	TSC_hg19_v1_chr17_-_43138397 BC006472 BC006546 NM_024819	-70960	-	AB075844 AL834392 AB384653 TSC_hg19_v1_chr17_-_43209885 BC072384 AK074240 NM_133373	443	-	NM_001135704 TSC_hg19_v1_chr17_+_43209980 BC041143	610	+	AK316359 NM_001135705 NM_001135706 NM_001135707 NM_024722 BC022000 AK296167 TSC_hg19_v1_chr17_+_43213056 AK023384 AK075104 BC029164 AB073387	3685	+	BC006538|NMT1|4836|N-myristoyltransferase 1##BC006569|NMT1|4836|N-myristoyltransferase 1##NM_021079|NMT1|4836|N-myristoyltransferase 1##AF043324|NMT1|4836|N-myristoyltransferase 1##AK291936|NMT1|4836|N-myristoyltransferase 1##AK303517|NMT1|4836|N-myristoyltransferase 1##BC008579|NMT1|4836|N-myristoyltransferase 1##AF020500|NMT1|4836|N-myristoyltransferase 1##Y17208|NMT1|4836|N-myristoyltransferase 1##Y17209|NMT1|4836|N-myristoyltransferase 1##BC006472|DCAKD|79877|dephospho-CoA kinase domain containing##BC006546|DCAKD|79877|dephospho-CoA kinase domain containing##NM_024819|DCAKD|79877|dephospho-CoA kinase domain containing##AB075844|PLCD3|113026|phospholipase C, delta 3##AL834392|PLCD3|113026|phospholipase C, delta 3##BC072384|PLCD3|113026|phospholipase C, delta 3##AK074240|PLCD3|113026|phospholipase C, delta 3##NM_133373|PLCD3|113026|phospholipase C, delta 3##NM_001135704|ACBD4|79777|acyl-CoA binding domain containing 4##BC041143|ACBD4|79777|acyl-CoA binding domain containing 4##AK316359|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135705|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135706|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135707|ACBD4|79777|acyl-CoA binding domain containing 4##NM_024722|ACBD4|79777|acyl-CoA binding domain containing 4##BC022000|ACBD4|79777|acyl-CoA binding domain containing 4##AK296167|ACBD4|79777|acyl-CoA binding domain containing 4##AK023384|ACBD4|79777|acyl-CoA binding domain containing 4##AK075104|ACBD4|79777|acyl-CoA binding domain containing 4##BC029164|ACBD4|79777|acyl-CoA binding domain containing 4##AB073387|ACBD4|79777|acyl-CoA binding domain containing 4	0.99891	CTCF.p2:21:0.999
chr19	29754481	29754601	reg1021056.p1	6.619	+	TSC_hg19_v1_chr19_-_29704107 NM_006003	-50420	-	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	-50481	-	TSC_hg19_v1_chr19_+_28284946 AK095009	-1469613	+	NM_001146339	262949	+	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	342648	+	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	401808	+	NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B##NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1	0.419352	CTCF.p2:3:0.419
chr7	129252703	129252841	reg1019397.p1	6.619	+	AK293351 TSC_hg19_v1_chr7_+_129251621 BC016925 AK290891	-1160	+	TSC_hg19_v1_chr7_+_129251531 NM_005011	-1231	+	TSC_hg19_v1_chr7_-_129251474 AK123679	-1294	-	L22454 NM_001040110	17145	+	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	339979	-	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	340037	-	AK293351|NRF1|4899|nuclear respiratory factor 1##BC016925|NRF1|4899|nuclear respiratory factor 1##AK290891|NRF1|4899|nuclear respiratory factor 1##NM_005011|NRF1|4899|nuclear respiratory factor 1##L22454|NRF1|4899|nuclear respiratory factor 1##NM_001040110|NRF1|4899|nuclear respiratory factor 1##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H	0.0	
chr9	75472099	75472223	reg1021251.p1	6.619	+	AF417578 NM_138691	-335445	+	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	-492061	-	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	-492436	-	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	95784	-	NM_000689	96071	-	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	294617	+	AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1	0.960619	CTCF.p2:-1:0.961
chr10	91369882	91370013	reg1020808.p1	6.617	+	CR936657 AK127303 NM_213606	-74636	-	U34605 TSC_hg19_v1_chr10_+_91174502 AK312358 AK293346	-195459	+	TSC_hg19_v1_chr10_+_91174324 NM_012420 BC025786	-195604	+	AF355198 AY027662 AY027663 NM_138316 NM_148978	33691	-	TSC_hg19_v1_chr10_-_91404973 AK125428	34996	-	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	35377	-	CR936657|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##AK127303|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##NM_213606|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##U34605|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK312358|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK293346|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##NM_012420|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##BC025786|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AF355198|PANK1|53354|pantothenate kinase 1##AY027662|PANK1|53354|pantothenate kinase 1##AY027663|PANK1|53354|pantothenate kinase 1##NM_138316|PANK1|53354|pantothenate kinase 1##NM_148978|PANK1|53354|pantothenate kinase 1##AK125428|PANK1|53354|pantothenate kinase 1##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1	0.343305	CTCF.p2:-28:0.343
chr13	29253870	29254015	reg1021948.p2	6.617	+	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	-20648	+	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	-20734	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	-184698	-	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	39113	-	BC150245 AB018317 NM_001033602 AB384524	344833	+	BC032481 NM_015233 AK293970 BC119654 BC119655 BC129985	748868	+	AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3##BC150245|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AB018317|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_001033602|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2	0.994739	CTCF.p2:4:0.995
chr13	67192985	67193071	reg1021594.p1	6.617	+	AK289924 NM_022843	-5203374	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-5203775	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-6221549	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	611476	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	3489513	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	5247231	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.019407	
chr3	15568597	15568733	reg1023961.p1	6.617	+	BC126363 BC144004 BC074828 BC074829 TSC_hg19_v1_chr3_-_15563197 AY150334 AY150335 AY150336 AY150337 AY150338 AY150339 AJ225895 AF057036 NM_005677 NM_080539 AK289688	-5447	-	AK128401 NM_080538	-28287	-	TSC_hg19_v1_chr3_+_15469073 NM_033083 AK312330 AK304697 BC041329 AF272973 CU691982	-99497	+	DQ895558 EU176367 AF161397 TSC_hg19_v1_chr3_-_15643040	74339	-	BC007440 TSC_hg19_v1_chr3_-_15643077 AJ131753 AK056977 AK299287 AK301546 AK302086 BC001627 AK301990 NM_012260	74431	-	AK297033 TSC_hg19_v1_chr3_+_15643251 NM_000060 AK313252 AK294301 U03274 BC012099 CU680214	74583	+	BC126363|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC144004|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC074828|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC074829|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150334|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150335|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150336|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150337|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150338|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150339|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AJ225895|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AF057036|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_005677|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080539|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AK289688|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_033083|EAF1|85403|ELL associated factor 1##AK312330|EAF1|85403|ELL associated factor 1##AK304697|EAF1|85403|ELL associated factor 1##BC041329|EAF1|85403|ELL associated factor 1##AF272973|EAF1|85403|ELL associated factor 1##DQ895558|HACL1|26061|2-hydroxyacyl-CoA lyase 1##EU176367|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AF161397|HACL1|26061|2-hydroxyacyl-CoA lyase 1##BC007440|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AJ131753|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK056977|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK301546|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK302086|HACL1|26061|2-hydroxyacyl-CoA lyase 1##BC001627|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK301990|HACL1|26061|2-hydroxyacyl-CoA lyase 1##NM_012260|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK297033|BTD|686|biotinidase##NM_000060|BTD|686|biotinidase##AK313252|BTD|686|biotinidase##AK294301|BTD|686|biotinidase##U03274|BTD|686|biotinidase##BC012099|BTD|686|biotinidase	0.0	
chr3	75220870	75221035	reg1020318.p1	6.617	+	AB384611 BC150608 NM_020872	-650650	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1546914	-	BC051316 BC064501 NM_018029	-2110143	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	263197	-	AK000525 NM_001124759	492531	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	500534	+	BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074	0.251465	CTCF.p2:17:0.251
chr8	133663798	133663943	reg1024662.p1	6.617	+	NM_004519 TSC_hg19_v1_chr8_-_133493146	-170793	-	TSC_hg19_v1_chr8_-_133492751 AB527350 BC128576	-171083	-	AB208890 AF033347 TSC_hg19_v1_chr8_-_133492689	-171247	-	TSC_hg19_v1_chr8_-_133687792 BC027589 BC047286 NM_012472 AK313107	23957	-	BC062592 AK057631 BC105783 NM_001145153 NM_144649	108990	-	TSC_hg19_v1_chr8_+_133787606 NM_016018 NM_032205 NM_198513	123713	+	NM_004519|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##BC027589|LRRC6|23639|leucine rich repeat containing 6##BC047286|LRRC6|23639|leucine rich repeat containing 6##NM_012472|LRRC6|23639|leucine rich repeat containing 6##AK313107|LRRC6|23639|leucine rich repeat containing 6##BC062592|TMEM71|137835|transmembrane protein 71##AK057631|TMEM71|137835|transmembrane protein 71##BC105783|TMEM71|137835|transmembrane protein 71##NM_001145153|TMEM71|137835|transmembrane protein 71##NM_144649|TMEM71|137835|transmembrane protein 71##NM_016018|PHF20L1|51105|PHD finger protein 20-like 1##NM_032205|PHF20L1|51105|PHD finger protein 20-like 1##NM_198513|PHF20L1|51105|PHD finger protein 20-like 1	0.999074	CTCF.p2:14:0.999
chrX	79834152	79834278	reg1021590.p2	6.617	+	BX537938 NM_152630 BC030784 AK313875 BC028710 BC034979	-158253	+	AK128147 NM_001170574	-243213	+	BC014194 NM_016954 AY035371 AB527983 CU680824	-556461	+	BC111490 AY497046 AY497048 AY497049 AY497050 AY497051 AY497052 AY497053 AY497054 AY497055 NM_153252	230992	-	NM_003022 AK024892 AK309350 BC103762 TSC_hg19_v1_chrX_+_80457495	623188	+	AK094058 AX748432 NM_030763	623225	-	BX537938|FAM46D|169966|family with sequence similarity 46, member D##NM_152630|FAM46D|169966|family with sequence similarity 46, member D##BC030784|FAM46D|169966|family with sequence similarity 46, member D##AK313875|FAM46D|169966|family with sequence similarity 46, member D##BC028710|FAM46D|169966|family with sequence similarity 46, member D##BC034979|FAM46D|169966|family with sequence similarity 46, member D##AK128147|FAM46D|169966|family with sequence similarity 46, member D##NM_001170574|FAM46D|169966|family with sequence similarity 46, member D##BC014194|TBX22|50945|T-box 22##NM_016954|TBX22|50945|T-box 22##AY035371|TBX22|50945|T-box 22##BC111490|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497046|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497048|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497049|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497050|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497051|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497052|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497053|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497054|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497055|BRWD3|254065|bromodomain and WD repeat domain containing 3##NM_153252|BRWD3|254065|bromodomain and WD repeat domain containing 3##NM_003022|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK024892|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309350|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##BC103762|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5	0.976943	CTCF.p2:-2:0.977
chr11	62462115	62462289	reg1002635.p1	6.616	+	NM_203422	-4832	-	AK291334 TSC_hg19_v1_chr11_-_62457003 AY358354 BC053902 AL834319	-5102	-	AK054832 AK300542 AK303471 TSC_hg19_v1_chr11_-_62446546 BC040129 AK297856	-15642	-	TSC_hg19_v1_chr11_-_62472904 CU678804 CU680238 CU692014	10740	-	TSC_hg19_v1_chr11_-_62473729 BC041640 BC012140 BC004911 AK075317 AK225029 AK027524 NM_001130702 NM_032667	11494	-	CU679517 DQ893483 EU176769 TSC_hg19_v1_chr11_-_62474716 BC093048	12494	-	NM_203422|LRRN4CL|221091|LRRN4 C-terminal like##AK291334|LRRN4CL|221091|LRRN4 C-terminal like##AY358354|LRRN4CL|221091|LRRN4 C-terminal like##BC053902|LRRN4CL|221091|LRRN4 C-terminal like##AL834319|LRRN4CL|221091|LRRN4 C-terminal like##AK054832|UBXN1|51035|UBX domain protein 1##AK300542|UBXN1|51035|UBX domain protein 1##AK303471|UBXN1|51035|UBX domain protein 1##BC040129|UBXN1|51035|UBX domain protein 1##AK297856|UBXN1|51035|UBX domain protein 1##BC041640|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##BC012140|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##BC004911|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK075317|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK225029|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK027524|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##NM_001130702|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##NM_032667|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##DQ893483|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##EU176769|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##BC093048|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	0.0	
chr1	65141549	65141640	reg1022315.p1	6.615	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	-205076	+	BC029895 NM_152489	-472105	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	-901935	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	69205	+	TSC_hg19_v1_chr1_-_65432181 BC062431 BC009079 NM_002227	290420	-	TSC_hg19_v1_chr1_-_65432203 BC111401	290634	-	NM_020925|CACHD1|57685|cache domain containing 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2##BC062431|JAK1|3716|Janus kinase 1##BC009079|JAK1|3716|Janus kinase 1##NM_002227|JAK1|3716|Janus kinase 1##BC111401|JAK1|3716|Janus kinase 1	0.996958	CTCF.p2:26:0.997
chr7	45930837	45930938	reg1019146.p1	6.615	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-2782	+	TSC_hg19_v1_chr7_-_45808577 AL832059 BC092503	-122297	-	AB209496 TSC_hg19_v1_chr7_+_45614187	-316688	+	AF042356 TSC_hg19_v1_chr7_+_45933167	2247	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	29919	-	TSC_hg19_v1_chr7_-_47579207 BC071791	1648322	-	NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##AL832059|SEPT7P2|641977|septin 7 pseudogene 2##BC092503|SEPT7P2|641977|septin 7 pseudogene 2##AB209496|ADCY1|107|adenylate cyclase 1 (brain)##DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##BC071791|TNS3|64759|tensin 3	0.857099	CTCF.p2:-2:0.857
chr1	13528297	13528416	reg1024017.p1	6.614	+	NM_001100114	-6394	+	NM_001099852	-12291	+	NM_001045480 BC144662 BC146858	-33101	+	NM_001012277 BC144565	82164	-	BC140755 NM_001012276	83184	-	AK124292 NM_001010890 NM_001098376 BC101343 BC137391 BC171794	113623	+	NM_001100114|PRAMEF21|391001|PRAME family member 21##NM_001099852|PRAMEF20|645425|PRAME family member 20##NM_001045480|PRAMEF16|654348|PRAME family member 16##BC144662|PRAMEF17|391004|PRAME family member 17##BC146858|PRAMEF17|391004|PRAME family member 17##NM_001012277|PRAMEF7|441871|PRAME family member 7##BC144565|PRAMEF7|441871|PRAME family member 7##BC140755|PRAMEF7|441871|PRAME family member 7##NM_001012276|PRAMEF8|391002|PRAME family member 8##AK124292|PRAMEF9|343070|PRAME family member 9##NM_001010890|PRAMEF9|343070|PRAME family member 9##NM_001098376|PRAMEF15|653619|PRAME family member 15##BC101343|PRAMEF9|343070|PRAME family member 9##BC137391|PRAMEF9|343070|PRAME family member 9##BC171794|PRAMEF9|343070|PRAME family member 9	1.163855	CTCF.p2:13:0.999
chr20	13439640	13439785	reg1022442.p1	6.614	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	-237289	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	-450071	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-1541155	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	179852	-	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	325829	-	TSC_hg19_v1_chr20_+_13765698 NM_001039375 NM_024120 AK289781 AK091060 AX746757 BC073158 CU687252 BC005984	326041	+	NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_001039375|C20orf7|79133|chromosome 20 open reading frame 7##NM_024120|C20orf7|79133|chromosome 20 open reading frame 7##AK289781|C20orf7|79133|chromosome 20 open reading frame 7##AK091060|C20orf7|79133|chromosome 20 open reading frame 7##BC073158|C20orf7|79133|chromosome 20 open reading frame 7##BC005984|C20orf7|79133|chromosome 20 open reading frame 7	0.906274	CTCF.p2:-13:0.895
chr4	42284140	42284279	reg1021929.p2	6.613	+	AB126828 AB126829 NM_001159547 NM_207406	-129315	-	TSC_hg19_v1_chr4_-_42154719 AK125953 AB463533	-129553	-	TSC_hg19_v1_chr4_-_42154134 BC128592 BC128593	-130049	-	NM_001080505	115646	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	374879	-	AB528853 NM_001080476	611072	+	AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##AK125953|BEND4|389206|BEN domain containing 4##BC128592|BEND4|389206|BEN domain containing 4##BC128593|BEND4|389206|BEN domain containing 4##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1	0.944155	CTCF.p2:-9:0.944
chr9	92904174	92904291	reg1022730.p1	6.613	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-684251	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-791225	-	BC054500 NM_001142287 NM_006378	-809622	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	500887	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	659804	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	659835	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.942432	CTCF.p2:-16:0.942
chrX	102431427	102431542	reg1021186.p1	6.613	+	CU689204 DQ891319 DQ894503 BC031616 AF346619 AJ277527 NM_022052 AK302447 TSC_hg19_v1_chrX_-_102348072 AK302586	-83431	-	TSC_hg19_v1_chrX_-_102319100 AF237783 AK290958 NM_018476	-112353	-	AF220189 AY833561 TSC_hg19_v1_chrX_-_102319085	-112402	-	TSC_hg19_v1_chrX_+_102470035 NM_001080425 NM_001127688 AK000959 AY833563 BC015794 BC068069	38565	+	TSC_hg19_v1_chrX_-_102510102 AK026349 AL833632 NM_001006684 NM_153333	78606	-	BC132922 BC132924 NM_001012979	100250	-	DQ891319|NXF3|56000|nuclear RNA export factor 3##DQ894503|NXF3|56000|nuclear RNA export factor 3##BC031616|NXF3|56000|nuclear RNA export factor 3##AF346619|NXF3|56000|nuclear RNA export factor 3##AJ277527|NXF3|56000|nuclear RNA export factor 3##NM_022052|NXF3|56000|nuclear RNA export factor 3##AK302447|NXF3|56000|nuclear RNA export factor 3##AK302586|NXF3|56000|nuclear RNA export factor 3##AF237783|BEX1|55859|brain expressed, X-linked 1##AK290958|BEX1|55859|brain expressed, X-linked 1##NM_018476|BEX1|55859|brain expressed, X-linked 1##AF220189|BEX1|55859|brain expressed, X-linked 1##AY833561|BEX1|55859|brain expressed, X-linked 1##NM_001080425|BEX4|56271|brain expressed, X-linked 4##NM_001127688|BEX4|56271|brain expressed, X-linked 4##AK000959|BEX4|56271|brain expressed, X-linked 4##AY833563|BEX4|56271|brain expressed, X-linked 4##BC015794|BEX4|56271|brain expressed, X-linked 4##BC068069|BEX4|56271|brain expressed, X-linked 4##AK026349|TCEAL8|90843|transcription elongation factor A (SII)-like 8##AL833632|TCEAL8|90843|transcription elongation factor A (SII)-like 8##NM_001006684|TCEAL8|90843|transcription elongation factor A (SII)-like 8##NM_153333|TCEAL8|90843|transcription elongation factor A (SII)-like 8##BC132922|TCEAL5|340543|transcription elongation factor A (SII)-like 5##BC132924|TCEAL5|340543|transcription elongation factor A (SII)-like 5##NM_001012979|TCEAL5|340543|transcription elongation factor A (SII)-like 5	0.856717	CTCF.p2:7:0.857
chr1	212933622	212933727	reg1018714.p2	6.612	+	TSC_hg19_v1_chr1_-_212873317 AF255346 NM_018664	-60354	-	TSC_hg19_v1_chr1_-_212873221 BC117489 BC117491	-60444	-	AB463432 HQ258061 TSC_hg19_v1_chr1_-_212873132	-60554	-	AB528354 CU675531 DQ892899 DQ896149 AK222996 AF201941 TSC_hg19_v1_chr1_-_212965111 BC007067 AK223260 AK303250 BC036048 AF255793 AK313730 NM_001042549 NM_015471	31447	-	AK293129 NM_001042552 NM_001042553 NM_001146169 NM_001146170 NM_001146171 AK304557 TSC_hg19_v1_chr1_+_212965255 BC113638 BC117485 BC143956 BC143957 AL832248 BC048115 HQ258161	31544	+	AY640234 BC035742 NM_001024601	87294	-	AF255346|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##NM_018664|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117489|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117491|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##HQ258061|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##DQ892899|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##DQ896149|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK222996|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF201941|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC007067|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK223260|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK303250|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC036048|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF255793|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK313730|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001042549|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_015471|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK293129|TATDN3|128387|TatD DNase domain containing 3##NM_001042552|TATDN3|128387|TatD DNase domain containing 3##NM_001042553|TATDN3|128387|TatD DNase domain containing 3##NM_001146169|TATDN3|128387|TatD DNase domain containing 3##NM_001146170|TATDN3|128387|TatD DNase domain containing 3##NM_001146171|TATDN3|128387|TatD DNase domain containing 3##AK304557|TATDN3|128387|TatD DNase domain containing 3##BC113638|TATDN3|128387|TatD DNase domain containing 3##BC117485|TATDN3|128387|TatD DNase domain containing 3##BC143956|TATDN3|128387|TatD DNase domain containing 3##BC143957|TATDN3|128387|TatD DNase domain containing 3##AL832248|TATDN3|128387|TatD DNase domain containing 3##BC048115|TATDN3|128387|TatD DNase domain containing 3##HQ258161|TATDN3|128387|TatD DNase domain containing 3##AY640234|C1orf227|149643|chromosome 1 open reading frame 227##BC035742|C1orf227|149643|chromosome 1 open reading frame 227##NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227	0.783536	CTCF.p2:6:0.784
chr14	53762809	53762920	reg1021944.p1	6.612	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-142814	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-142896	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-142991	-	NM_130851	658405	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	660669	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	1100857	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.998144	CTCF.p2:24:0.998
chr15	85142386	85142512	reg1022215.p2	6.611	+	NM_001243531	-301208	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-819622	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-1026221	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	1832	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	55023	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	55057	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	0.761725	CTCF.p2:-12:0.762
chr12	76866790	76866899	reg1020660.p2	6.610	+	TSC_hg19_v1_chr12_-_76742196 AK304178 BC026355 NM_024685	-124650	-	NM_004537 NM_139207	-388107	-	TSC_hg19_v1_chr12_-_76478466 BC002387 AL162068 AK122670 AK298936 D28430 AK297500 AK304787	-388356	-	AB040884 TSC_hg19_v1_chr12_-_76953317 AK289997 CR749542	86447	-	BC111728 TSC_hg19_v1_chr12_-_76953484	86639	-	TSC_hg19_v1_chr12_-_76953526 BC082235	86687	-	AK304178|BBS10|79738|Bardet-Biedl syndrome 10##BC026355|BBS10|79738|Bardet-Biedl syndrome 10##NM_024685|BBS10|79738|Bardet-Biedl syndrome 10##NM_004537|NAP1L1|4673|nucleosome assembly protein 1-like 1##NM_139207|NAP1L1|4673|nucleosome assembly protein 1-like 1##BC002387|NAP1L1|4673|nucleosome assembly protein 1-like 1##AL162068|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK122670|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK298936|NAP1L1|4673|nucleosome assembly protein 1-like 1##D28430|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK297500|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK304787|NAP1L1|4673|nucleosome assembly protein 1-like 1##AB040884|OSBPL8|114882|oxysterol binding protein-like 8##AK289997|OSBPL8|114882|oxysterol binding protein-like 8##CR749542|OSBPL8|114882|oxysterol binding protein-like 8##BC111728|OSBPL8|114882|oxysterol binding protein-like 8##BC082235|OSBPL8|114882|oxysterol binding protein-like 8	0.830069	CTCF.p2:5:0.830
chr6	24695854	24695985	reg1016901.p1	6.610	+	NM_001160094 NM_018473 TSC_hg19_v1_chr6_+_24667281 AF155649 AF220186 AK000508 AF274952 AK309738 BC000894	-28583	+	TSC_hg19_v1_chr6_-_24667128 AK298699	-28697	-	AJ420495 TSC_hg19_v1_chr6_-_24667106 AK296623 AB587417 AK002168 EU446614 BC110375 AF223469 AJ269473 AF201687 BC017553 NM_016614 AK308836	-28949	-	AK022681 AB075502 AL136632 NM_030939	23425	-	TSC_hg19_v1_chr6_+_24775164 AK021685 NM_001251989 NM_001251990 NM_015895 AK315743 BC005389 BC005185	79275	+	NM_001251991	79721	+	NM_001160094|ACOT13|55856|acyl-CoA thioesterase 13##NM_018473|ACOT13|55856|acyl-CoA thioesterase 13##AF155649|ACOT13|55856|acyl-CoA thioesterase 13##AF220186|ACOT13|55856|acyl-CoA thioesterase 13##AK000508|ACOT13|55856|acyl-CoA thioesterase 13##AF274952|ACOT13|55856|acyl-CoA thioesterase 13##AK309738|ACOT13|55856|acyl-CoA thioesterase 13##BC000894|ACOT13|55856|acyl-CoA thioesterase 13##AK298699|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AJ420495|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK296623|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK002168|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##EU446614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC110375|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF223469|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AJ269473|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF201687|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC017553|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##NM_016614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK308836|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK022681|C6orf62|81688|chromosome 6 open reading frame 62##AB075502|C6orf62|81688|chromosome 6 open reading frame 62##AL136632|C6orf62|81688|chromosome 6 open reading frame 62##NM_030939|C6orf62|81688|chromosome 6 open reading frame 62##AK021685|GMNN|51053|geminin, DNA replication inhibitor##NM_001251989|GMNN|51053|geminin, DNA replication inhibitor##NM_001251990|GMNN|51053|geminin, DNA replication inhibitor##NM_015895|GMNN|51053|geminin, DNA replication inhibitor##AK315743|GMNN|51053|geminin, DNA replication inhibitor##BC005389|GMNN|51053|geminin, DNA replication inhibitor##BC005185|GMNN|51053|geminin, DNA replication inhibitor##NM_001251991|GMNN|51053|geminin, DNA replication inhibitor	0.0	
chr11	71291222	71291386	reg1021882.p1	6.609	+	AB126079 BC137550 BC137566 NM_001012710	-14696	+	NM_005553 X63755 BC101744 AB126078 CU686892 BC069531	-31720	+	AB126077 NM_021046 AY360461	-42219	+	BC130498 BC130502 AB126080 NM_001005405	2610	-	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	207303	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	233602	-	AB126079|KRTAP5-10|387273|keratin associated protein 5-10##BC137550|KRTAP5-10|387273|keratin associated protein 5-10##BC137566|KRTAP5-10|387273|keratin associated protein 5-10##NM_001012710|KRTAP5-10|387273|keratin associated protein 5-10##NM_005553|KRTAP5-9|3846|keratin associated protein 5-9##X63755|KRTAP5-9|3846|keratin associated protein 5-9##BC101744|KRTAP5-9|3846|keratin associated protein 5-9##AB126078|KRTAP5-9|3846|keratin associated protein 5-9##BC069531|KRTAP5-9|3846|keratin associated protein 5-9##AB126077|KRTAP5-8|57830|keratin associated protein 5-8##NM_021046|KRTAP5-8|57830|keratin associated protein 5-8##AY360461|KRTAP5-8|57830|keratin associated protein 5-8##BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11##NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1##BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene	0.967405	CTCF.p2:2:0.967
chr5	123006916	123007058	reg1005070.p2	6.609	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-159105	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-247843	-	NM_001136239 AK297992 AF272898 AF272899	-582143	+	BC131507 AB033107 BC151226 NM_020747	1073801	-	NM_001146319 AK316288 AK300154	2688827	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	2751856	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.0	
chr6	126227641	126227802	reg1020952.p1	6.609	+	TSC_hg19_v1_chr6_+_126112105 BC036461 AK127512 AB074157 AK294558 BX537385 AL832621 AL832628 AB074156	-115613	+	TSC_hg19_v1_chr6_+_126111841 NM_001122842 NM_001199621 NM_181782	-115868	+	TSC_hg19_v1_chr6_+_126102306 AF493978 NM_001199619 NM_001199620 AK307395 BC137094 BC137095	-125387	+	NM_001199622 TSC_hg19_v1_chr6_+_126240392 AK094706	12702	+	TSC_hg19_v1_chr6_+_126277915 NM_138571 BX647228 AK309857 BC015732 AK057688 AJ420577 AY035387 AY035388 AY486460 AY486461 DQ892201 DQ895396	50264	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	79881	+	BC036461|NCOA7|135112|nuclear receptor coactivator 7##AK127512|NCOA7|135112|nuclear receptor coactivator 7##AB074157|NCOA7|135112|nuclear receptor coactivator 7##AK294558|NCOA7|135112|nuclear receptor coactivator 7##BX537385|NCOA7|135112|nuclear receptor coactivator 7##AL832621|NCOA7|135112|nuclear receptor coactivator 7##AL832628|NCOA7|135112|nuclear receptor coactivator 7##AB074156|NCOA7|135112|nuclear receptor coactivator 7##NM_001122842|NCOA7|135112|nuclear receptor coactivator 7##NM_001199621|NCOA7|135112|nuclear receptor coactivator 7##NM_181782|NCOA7|135112|nuclear receptor coactivator 7##AF493978|NCOA7|135112|nuclear receptor coactivator 7##NM_001199619|NCOA7|135112|nuclear receptor coactivator 7##NM_001199620|NCOA7|135112|nuclear receptor coactivator 7##AK307395|NCOA7|135112|nuclear receptor coactivator 7##BC137094|NCOA7|135112|nuclear receptor coactivator 7##BC137095|NCOA7|135112|nuclear receptor coactivator 7##NM_001199622|NCOA7|135112|nuclear receptor coactivator 7##AK094706|NCOA7|135112|nuclear receptor coactivator 7##NM_138571|HINT3|135114|histidine triad nucleotide binding protein 3##BX647228|HINT3|135114|histidine triad nucleotide binding protein 3##AK309857|HINT3|135114|histidine triad nucleotide binding protein 3##BC015732|HINT3|135114|histidine triad nucleotide binding protein 3##AK057688|HINT3|135114|histidine triad nucleotide binding protein 3##AJ420577|HINT3|135114|histidine triad nucleotide binding protein 3##AY035387|HINT3|135114|histidine triad nucleotide binding protein 3##AY035388|HINT3|135114|histidine triad nucleotide binding protein 3##AY486460|HINT3|135114|histidine triad nucleotide binding protein 3##AY486461|HINT3|135114|histidine triad nucleotide binding protein 3##DQ892201|HINT3|135114|histidine triad nucleotide binding protein 3##DQ895396|HINT3|135114|histidine triad nucleotide binding protein 3##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)	0.992642	CTCF.p2:22:0.993
chr8	64540513	64540636	reg1021015.p1	6.609	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-459374	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-459430	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-541947	-	NM_152414 AK293979	952284	+	TSC_hg19_v1_chr8_+_65493611 AK091333	953090	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	1170705	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.0	
chr9	130683753	130683933	reg1001134.p1	6.609	+	BC036705 TSC_hg19_v1_chr9_-_130679297 AK292049 AK000600 NM_175039 NM_175040	-4583	-	TSC_hg19_v1_chr9_-_130667604 AY358672 AK124217 AK310850	-16228	-	TSC_hg19_v1_chr9_-_130661892 BC036102	-21933	-	TSC_hg19_v1_chr9_-_130689700 BC042184 NM_173492	5890	-	NM_001135219	9232	-	TSC_hg19_v1_chr9_-_130700118 BC015374	16264	-	BC036705|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AK292049|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AK000600|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##NM_175039|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##NM_175040|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AY358672|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK124217|LOC100131355|100131355|uncharacterized LOC100131355##AK310850|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC036102|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC042184|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##NM_173492|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##NM_001135219|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##BC015374|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit	0.0	
chrX	38844703	38844873	reg1021530.p1	6.609	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-181248	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-181328	+	BC008908 NM_021242	-181716	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	1111904	-	BC114220 NM_001123383 NM_001123384	1191793	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	1595398	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.999351	CTCF.p2:28:0.999
chr2	215825541	215825697	reg1021110.p1	6.608	+	AB590656 JF790283 JF790285 JF790287 TSC_hg19_v1_chr2_-_215674408 BC126426 BC126428 AX794378 JF790280 JF790281 JF790282 JF790284 U76638 AK314260 AK301843 JF790286 AK223409 NM_000465	-151260	-	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	-549159	+	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	-1676462	+	AY033486 NM_015657	71190	-	BC144073 AY219711 NM_173076	177490	-	NM_004044 TSC_hg19_v1_chr2_+_216176781 AK313066 D82348 AK298142	351119	+	JF790283|BARD1|580|BRCA1 associated RING domain 1##JF790285|BARD1|580|BRCA1 associated RING domain 1##JF790287|BARD1|580|BRCA1 associated RING domain 1##BC126426|BARD1|580|BRCA1 associated RING domain 1##BC126428|BARD1|580|BRCA1 associated RING domain 1##AX794378|BARD1|580|BRCA1 associated RING domain 1##JF790280|BARD1|580|BRCA1 associated RING domain 1##JF790281|BARD1|580|BRCA1 associated RING domain 1##JF790282|BARD1|580|BRCA1 associated RING domain 1##JF790284|BARD1|580|BRCA1 associated RING domain 1##U76638|BARD1|580|BRCA1 associated RING domain 1##AK314260|BARD1|580|BRCA1 associated RING domain 1##AK301843|BARD1|580|BRCA1 associated RING domain 1##JF790286|BARD1|580|BRCA1 associated RING domain 1##AK223409|BARD1|580|BRCA1 associated RING domain 1##NM_000465|BARD1|580|BRCA1 associated RING domain 1##BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##AY033486|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_015657|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##BC144073|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##AY219711|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_173076|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_004044|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK313066|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##D82348|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK298142|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase	0.995432	CTCF.p2:-1:0.995
chr6	73232629	73232745	reg1022208.p2	6.608	+	NM_001168411 AK300853	-156230	+	AK308658 NM_001168410	-306225	+	AK309185 NM_001168409	-306543	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	98883	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	99202	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	99374	+	NM_001168411|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK300853|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK308658|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001168410|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK309185|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001168409|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5	0.751685	CTCF.p2:3:0.752
chr7	69359038	69359170	reg1020256.p2	6.608	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-294516	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-294775	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-295268	+	TSC_hg19_v1_chr7_+_70231164 AK296981	872101	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1238684	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2442674	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.0	
chr9	26326463	26326591	reg1001871.p1	6.608	+	AK131322 NM_001004352	-259855	+	NM_001004125	-647672	-	BC017510 TSC_hg19_v1_chr9_-_25678278 BC046919 AY168647 BC110824	-648194	-	AB590748 CU687198 BC071953 TSC_hg19_v1_chr9_-_26892779 AK023719 BC014658 NM_001167575 NM_024828	566242	-	EU176453 EU176795 AB385043 TSC_hg19_v1_chr9_-_26947158 BC032551 AK022761	620577	-	TSC_hg19_v1_chr9_-_26947165 AK001642	620641	-	AK131322|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004352|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004125|TUSC1|286319|tumor suppressor candidate 1##BC017510|TUSC1|286319|tumor suppressor candidate 1##BC046919|TUSC1|286319|tumor suppressor candidate 1##AY168647|TUSC1|286319|tumor suppressor candidate 1##BC110824|TUSC1|286319|tumor suppressor candidate 1##BC071953|C9orf82|79886|chromosome 9 open reading frame 82##AK023719|C9orf82|79886|chromosome 9 open reading frame 82##BC014658|C9orf82|79886|chromosome 9 open reading frame 82##NM_001167575|C9orf82|79886|chromosome 9 open reading frame 82##NM_024828|C9orf82|79886|chromosome 9 open reading frame 82##EU176453|PLAA|9373|phospholipase A2-activating protein##EU176795|PLAA|9373|phospholipase A2-activating protein##BC032551|PLAA|9373|phospholipase A2-activating protein##AK022761|PLAA|9373|phospholipase A2-activating protein##AK001642|PLAA|9373|phospholipase A2-activating protein	0.0	
chr11	26306525	26306675	reg1024655.p1	6.607	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-1787951	+	NM_001195637	-3424629	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-3455255	-	NM_031418 AK302659	47130	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	287140	-	BC049207 NM_178498	436959	-	AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	0.993825	CTCF.p2:5:0.994
chr1	165840752	165840885	reg1020300.p1	6.607	+	AF236637 AK294537 TSC_hg19_v1_chr1_+_165797063 AB062451	-43732	+	TSC_hg19_v1_chr1_+_165796794 NM_012474 BC002906	-44047	+	AK124964 BC009228 TSC_hg19_v1_chr1_+_165738255 BC071770	-102597	+	TSC_hg19_v1_chr1_-_166135951 NM_001017961	295136	-	TSC_hg19_v1_chr1_-_166135982 AB593134	295167	-	TSC_hg19_v1_chr1_-_166136076 BC114214	295322	-	AF236637|UCK2|7371|uridine-cytidine kinase 2##AK294537|UCK2|7371|uridine-cytidine kinase 2##AB062451|UCK2|7371|uridine-cytidine kinase 2##NM_012474|UCK2|7371|uridine-cytidine kinase 2##BC002906|UCK2|7371|uridine-cytidine kinase 2##AK124964|LOC100147773|100147773|uncharacterized LOC100147773##BC009228|LOC100147773|100147773|uncharacterized LOC100147773##BC071770|LOC100147773|100147773|uncharacterized LOC100147773##NM_001017961|FAM78B|149297|family with sequence similarity 78, member B##BC114214|FAM78B|149297|family with sequence similarity 78, member B	0.998133	CTCF.p2:34:0.998
chr1	174713241	174713344	reg1019726.p2	6.607	+	BC095532 NM_005684 CU688296 CU688298 BC067456 BC067457 BC067458 BC067459 BC067460 BC069460 HQ995526	-296062	+	AK095838 TSC_hg19_v1_chr1_+_174128676 AL157958	-584600	+	BC041888 NM_014857 TSC_hg19_v1_chr1_+_174128608	-584692	+	AB007940 NM_001243765	55742	+	NM_001243763 AL049701	130267	+	NM_001035230 BC012094	131377	+	BC095532|GPR52|9293|G protein-coupled receptor 52##NM_005684|GPR52|9293|G protein-coupled receptor 52##BC067456|GPR52|9293|G protein-coupled receptor 52##BC067457|GPR52|9293|G protein-coupled receptor 52##BC067458|GPR52|9293|G protein-coupled receptor 52##BC067459|GPR52|9293|G protein-coupled receptor 52##BC067460|GPR52|9293|G protein-coupled receptor 52##BC069460|GPR52|9293|G protein-coupled receptor 52##HQ995526|GPR52|9293|G protein-coupled receptor 52##AK095838|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL157958|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC041888|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_014857|RABGAP1L|9910|RAB GTPase activating protein 1-like##AB007940|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243765|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243763|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL049701|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001035230|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC012094|RABGAP1L|9910|RAB GTPase activating protein 1-like	0.936879	CTCF.p2:-3:0.937
chr1	179998149	179998259	reg1020005.p1	6.607	+	AK000704 TSC_hg19_v1_chr1_+_179965782	-32435	+	TSC_hg19_v1_chr1_+_179923939 AK095601 NM_014810	-74299	+	TSC_hg19_v1_chr1_+_179851986 AK291495	-146218	+	TSC_hg19_v1_chr1_+_180123961 NM_001004128 NM_002826 U97276	125734	+	TSC_hg19_v1_chr1_+_180124003 AK290887	125785	+	TSC_hg19_v1_chr1_+_180124018 AY358941 AK290842	125813	+	AK000704|CEP350|9857|centrosomal protein 350kDa##AK095601|CEP350|9857|centrosomal protein 350kDa##NM_014810|CEP350|9857|centrosomal protein 350kDa##AK291495|TOR1AIP1|26092|torsin A interacting protein 1##NM_001004128|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##NM_002826|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##U97276|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##AK290887|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##AY358941|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##AK290842|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1	0.823496	CTCF.p2:-7:0.823
chr1	20901858	20901997	reg1024744.p1	6.607	+	AK126900 NM_207334 TSC_hg19_v1_chr1_+_20879013 BC142686	-22941	+	TSC_hg19_v1_chr1_-_20834623 AB097015 AL833889 AK293430 AK303820 AK022937 NM_024544	-67286	-	EU935008 AB528298 AM393331 AM393690 TSC_hg19_v1_chr1_-_20834605 BC014010 BC010101	-67367	-	BC048284 NM_001785 AY634312 BC054036 TSC_hg19_v1_chr1_+_20915592 AJ000474 CU691080 S52873	13605	+	TSC_hg19_v1_chr1_+_20959970 AB053323 NM_032409 AF316873 BC028215 DQ891033 DQ893330 DQ894212 DQ896646 AB384405	58070	+	AK093117 AX747934 TSC_hg19_v1_chr1_+_20964439	62499	+	AK126900|FAM43B|163933|family with sequence similarity 43, member B##NM_207334|FAM43B|163933|family with sequence similarity 43, member B##BC142686|FAM43B|163933|family with sequence similarity 43, member B##AB097015|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AL833889|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK293430|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK303820|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK022937|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##NM_024544|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##EU935008|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AM393331|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AM393690|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC014010|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC010101|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC048284|CDA|978|cytidine deaminase##NM_001785|CDA|978|cytidine deaminase##AY634312|CDA|978|cytidine deaminase##BC054036|CDA|978|cytidine deaminase##AJ000474|CDA|978|cytidine deaminase##S52873|CDA|978|cytidine deaminase##AB053323|PINK1|65018|PTEN induced putative kinase 1##NM_032409|PINK1|65018|PTEN induced putative kinase 1##AF316873|PINK1|65018|PTEN induced putative kinase 1##BC028215|PINK1|65018|PTEN induced putative kinase 1##DQ891033|PINK1|65018|PTEN induced putative kinase 1##DQ893330|PINK1|65018|PTEN induced putative kinase 1##DQ894212|PINK1|65018|PTEN induced putative kinase 1##DQ896646|PINK1|65018|PTEN induced putative kinase 1	0.984676	CTCF.p2:-11:0.985
chr1	246859905	246859992	reg1018226.p1	6.607	+	TSC_hg19_v1_chr1_+_246729853 BX647629 AK074142	-130102	+	TSC_hg19_v1_chr1_+_246729803 AK056563 AL834246	-130143	+	TSC_hg19_v1_chr1_+_246729757 BC036200 BC010228	-130203	+	NM_016002	27429	+	TSC_hg19_v1_chr1_+_246887713 AK075178 BC026185 CU693152 AF151807	27709	+	TSC_hg19_v1_chr1_-_247054277 AL833491	194347	-	BX647629|CNST|163882|consortin, connexin sorting protein##AK074142|CNST|163882|consortin, connexin sorting protein##AK056563|CNST|163882|consortin, connexin sorting protein##AL834246|CNST|163882|consortin, connexin sorting protein##BC036200|CNST|163882|consortin, connexin sorting protein##BC010228|CNST|163882|consortin, connexin sorting protein##NM_016002|SCCPDH|51097|saccharopine dehydrogenase (putative)##AK075178|SCCPDH|51097|saccharopine dehydrogenase (putative)##BC026185|SCCPDH|51097|saccharopine dehydrogenase (putative)##AF151807|SCCPDH|51097|saccharopine dehydrogenase (putative)##AL833491|AHCTF1|25909|AT hook containing transcription factor 1	0.944881	CTCF.p2:6:0.945
chr2	75063703	75063837	reg1022092.p3	6.607	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-1519	-	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	-2510	+	AF086198 NM_000189	-3989	+	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	122015	+	AK289765 NM_001058 NM_015727	362858	-	BC016157 TSC_hg19_v1_chr2_-_75788066	724277	-	AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2##AF086198|HK2|3099|hexokinase 2##NM_000189|HK2|3099|hexokinase 2##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##BC016157|FAM176A|84141|family with sequence similarity 176, member A	0.0	
chr8	66618384	66618542	reg1024164.p1	6.607	+	NM_001145838 CU692168 BX537854 D13634	-36296	+	NM_001145839 NM_014637 TSC_hg19_v1_chr8_+_66556973 AK316202 BX647507 AK304716 BC036116 BC043498 AK298945	-61503	+	TSC_hg19_v1_chr8_-_66546413 BC011607 BC018846 NM_018120	-72031	-	HQ258418 AK290801 BC058025 BC126360 NM_002603 U67932	82788	-	NM_001242318	135505	-	TSC_hg19_v1_chr8_-_66754300 AK292680	135829	-	NM_001145838|MTFR1|9650|mitochondrial fission regulator 1##BX537854|MTFR1|9650|mitochondrial fission regulator 1##D13634|MTFR1|9650|mitochondrial fission regulator 1##NM_001145839|MTFR1|9650|mitochondrial fission regulator 1##NM_014637|MTFR1|9650|mitochondrial fission regulator 1##AK316202|MTFR1|9650|mitochondrial fission regulator 1##BX647507|MTFR1|9650|mitochondrial fission regulator 1##AK304716|MTFR1|9650|mitochondrial fission regulator 1##BC036116|MTFR1|9650|mitochondrial fission regulator 1##BC043498|MTFR1|9650|mitochondrial fission regulator 1##AK298945|MTFR1|9650|mitochondrial fission regulator 1##BC011607|ARMC1|55156|armadillo repeat containing 1##BC018846|ARMC1|55156|armadillo repeat containing 1##NM_018120|ARMC1|55156|armadillo repeat containing 1##HQ258418|PDE7A|5150|phosphodiesterase 7A##AK290801|PDE7A|5150|phosphodiesterase 7A##BC058025|PDE7A|5150|phosphodiesterase 7A##BC126360|PDE7A|5150|phosphodiesterase 7A##NM_002603|PDE7A|5150|phosphodiesterase 7A##U67932|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##AK292680|PDE7A|5150|phosphodiesterase 7A	0.979218	CTCF.p2:5:0.979
chr16	47907479	47907597	reg1023544.p1	6.606	+	TSC_hg19_v1_chr16_+_47495241 X84908 CR936710 BC033657 AK309226	-412299	+	TSC_hg19_v1_chr16_+_47495206 NM_000293 NM_001031835 AK298588	-412350	+	TSC_hg19_v1_chr16_-_47495158 AF212247 AK301908	-412381	-	AY196326 AY040220 NM_033226	273082	-	AY040219 NM_033151	358643	-	AF367202 AF411579 NM_032583 NM_145186	361549	-	X84908|PHKB|5257|phosphorylase kinase, beta##CR936710|PHKB|5257|phosphorylase kinase, beta##BC033657|PHKB|5257|phosphorylase kinase, beta##AK309226|PHKB|5257|phosphorylase kinase, beta##NM_000293|PHKB|5257|phosphorylase kinase, beta##NM_001031835|PHKB|5257|phosphorylase kinase, beta##AF212247|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK301908|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AY196326|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040220|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##NM_033226|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040219|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_033151|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF367202|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF411579|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_032583|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_145186|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11	0.022571	
chr19	14897241	14897342	reg1022190.p1	6.606	+	BC053933 BC127004 BC127005 BC034949 NM_013447 NM_152916 NM_152917 NM_152918 NM_152919 NM_152920 NM_152921	-7942	-	TSC_hg19_v1_chr19_-_14887656 AK291776	-9579	-	BC082991 AF114491 AK301458 AK222891 AK298700 TSC_hg19_v1_chr19_-_14887654	-9653	-	NM_198944 HQ258391 BC117212	13693	-	NM_017506	41984	-	NM_001005190	55397	-	BC053933|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##BC127004|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##BC127005|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##BC034949|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_013447|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152916|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152917|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152918|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152919|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152920|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152921|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK291776|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##BC082991|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AF114491|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK301458|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK222891|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK298700|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_198944|OR7C1|26664|olfactory receptor, family 7, subfamily C, member 1##HQ258391|OR7C1|26664|olfactory receptor, family 7, subfamily C, member 1##BC117212|OR7C1|26664|olfactory receptor, family 7, subfamily C, member 1##NM_017506|OR7A5|26659|olfactory receptor, family 7, subfamily A, member 5##NM_001005190|OR7A10|390892|olfactory receptor, family 7, subfamily A, member 10	0.242006	CTCF.p2:-8:0.228
chrX	139848317	139848439	reg1021743.p1	6.606	+	TSC_hg19_v1_chrX_+_139791923 AK054978	-56451	+	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	-261126	-	BC137148 BC137149 NM_001013403	-800702	-	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	18274	-	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	236428	+	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	248433	+	AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1	0.999786	CTCF.p2:2:1.000
chr21	15632144	15632296	reg1021320.p2	6.605	+	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-43723	+	AB463838 AY197607 NM_198996	-52972	-	TSC_hg19_v1_chr21_+_15399763 BC070147 BC024173 BC048201	-232456	+	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	123253	-	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	286429	-	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	804997	-	NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AY197607|LIPI|149998|lipase, member I##NM_198996|LIPI|149998|lipase, member I##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1	0.990582	CTCF.p2:-23:0.991
chr22	32366766	32366872	reg1021872.p2	6.605	+	AJ704765 AJ704766 AL050256 NM_015372 AK315264	-25498	-	TSC_hg19_v1_chr22_+_32340608 AK312650 CR456612 AB385077 L20422 CU013208 CU013496	-26164	+	TSC_hg19_v1_chr22_+_32340520 NM_003405 X78138 BC003047 S80794	-26331	+	DQ656053 NM_000343 TSC_hg19_v1_chr22_+_32439037	72210	+	TSC_hg19_v1_chr22_+_32439103 AK312948	72294	+	TSC_hg19_v1_chr22_+_32439229 CR456579	72404	+	AJ704765|C22orf24|25775|chromosome 22 open reading frame 24##AJ704766|C22orf24|25775|chromosome 22 open reading frame 24##AL050256|C22orf24|25775|chromosome 22 open reading frame 24##NM_015372|C22orf24|25775|chromosome 22 open reading frame 24##AK315264|C22orf24|25775|chromosome 22 open reading frame 24##AK312650|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CR456612|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##L20422|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CU013208|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CU013496|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##NM_003405|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##X78138|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##BC003047|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##S80794|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##DQ656053|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##NM_000343|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##AK312948|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CR456579|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1	0.905934	CTCF.p2:-6:0.906
chr20	57267737	57267822	reg1022017.p1	6.604	+	NM_001204872 NM_001204873 AK297667 AK307771	-3591	+	TSC_hg19_v1_chr20_+_57226873 BC019042 AF008935 AF008936 AF008937 BC073876 AF038897 AF428146 AK026970	-40788	+	TSC_hg19_v1_chr20_+_57226338 AK316547 NM_001001433 NM_001134772 NM_001134773 NM_001204868 NM_003763 AK304867 AB209296	-41391	+	TSC_hg19_v1_chr20_+_57267908 NM_024663 BC020507 AK223094 AK021645 AK315684	106	+	TSC_hg19_v1_chr20_+_57288781 AX721181	21064	+	TSC_hg19_v1_chr20_+_57414737 AK314549	146961	+	NM_001204872|NPEPL1|79716|aminopeptidase-like 1##NM_001204873|NPEPL1|79716|aminopeptidase-like 1##AK297667|NPEPL1|79716|aminopeptidase-like 1##AK307771|NPEPL1|79716|aminopeptidase-like 1##BC019042|STX16|8675|syntaxin 16##AF008935|STX16|8675|syntaxin 16##AF008936|STX16|8675|syntaxin 16##AF008937|STX16|8675|syntaxin 16##BC073876|STX16|8675|syntaxin 16##AF038897|STX16|8675|syntaxin 16##AF428146|STX16|8675|syntaxin 16##AK026970|STX16|8675|syntaxin 16##AK316547|STX16|8675|syntaxin 16##NM_001001433|STX16|8675|syntaxin 16##NM_001134772|STX16|8675|syntaxin 16##NM_001134773|STX16|8675|syntaxin 16##NM_001204868|STX16|8675|syntaxin 16##NM_003763|STX16|8675|syntaxin 16##AK304867|STX16|8675|syntaxin 16##AB209296|STX16-NPEPL1|100534593|STX16-NPEPL1 readthrough (non-protein coding)##NM_024663|NPEPL1|79716|aminopeptidase-like 1##BC020507|NPEPL1|79716|aminopeptidase-like 1##AK223094|NPEPL1|79716|aminopeptidase-like 1##AK021645|NPEPL1|79716|aminopeptidase-like 1##AK315684|NPEPL1|79716|aminopeptidase-like 1##AK314549|GNAS|2778|GNAS complex locus	0.025594	
chr3	21058783	21058963	reg1018251.p2	6.604	+	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-831199	-	BC070075 TSC_hg19_v1_chr3_+_20081907 BC060823 AB527402	-976963	+	NM_003884 U57317	-977350	+	AK026072 NM_024697	733942	-	AK310298 TSC_hg19_v1_chr3_-_22414124	1355261	-	TSC_hg19_v1_chr3_+_23244600 AK307075	2185710	+	AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC070075|KAT2B|8850|K(lysine) acetyltransferase 2B##BC060823|KAT2B|8850|K(lysine) acetyltransferase 2B##NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B##U57317|KAT2B|8850|K(lysine) acetyltransferase 2B##AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AK310298|ZNF385D|79750|zinc finger protein 385D##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2	0.807483	CTCF.p2:0:0.807
chr7	99013285	99013388	reg1019948.p1	6.604	+	TSC_hg19_v1_chr7_+_99006650 S77329 U11861	-6678	+	TSC_hg19_v1_chr7_+_99006591 AK297784 BC104670 NM_003910 AK316477 BC022821	-6759	+	TSC_hg19_v1_chr7_-_99006284 NM_014891	-7034	-	TSC_hg19_v1_chr7_-_99036421 AK291004 AB014532 AK001615 BC103495 BC103502 BC103661 BC080580 NM_015545	23075	-	TSC_hg19_v1_chr7_+_99036565 NM_001081559 NM_006693 BC050738	23221	+	BC003101 TSC_hg19_v1_chr7_+_99036685 AB529148 CU690790 CR542161	23340	+	S77329|BUD31|8896|BUD31 homolog (S. cerevisiae)##U11861|BUD31|8896|BUD31 homolog (S. cerevisiae)##AK297784|BUD31|8896|BUD31 homolog (S. cerevisiae)##BC104670|BUD31|8896|BUD31 homolog (S. cerevisiae)##NM_003910|BUD31|8896|BUD31 homolog (S. cerevisiae)##AK316477|BUD31|8896|BUD31 homolog (S. cerevisiae)##BC022821|BUD31|8896|BUD31 homolog (S. cerevisiae)##NM_014891|PDAP1|11333|PDGFA associated protein 1##AK291004|PTCD1|26024|pentatricopeptide repeat domain 1##AB014532|PTCD1|26024|pentatricopeptide repeat domain 1##AK001615|PTCD1|26024|pentatricopeptide repeat domain 1##BC103495|PTCD1|26024|pentatricopeptide repeat domain 1##BC103502|PTCD1|26024|pentatricopeptide repeat domain 1##BC103661|PTCD1|26024|pentatricopeptide repeat domain 1##BC080580|PTCD1|26024|pentatricopeptide repeat domain 1##NM_015545|PTCD1|26024|pentatricopeptide repeat domain 1##NM_001081559|CPSF4|10898|cleavage and polyadenylation specific factor 4, 30kDa##NM_006693|CPSF4|10898|cleavage and polyadenylation specific factor 4, 30kDa##BC050738|CPSF4|10898|cleavage and polyadenylation specific factor 4, 30kDa##BC003101|CPSF4|10898|cleavage and polyadenylation specific factor 4, 30kDa##CR542161|CPSF4|10898|cleavage and polyadenylation specific factor 4, 30kDa	0.830069	CTCF.p2:7:0.830
chr10	105352633	105352745	reg1019436.p2	6.603	+	AK299620 TSC_hg19_v1_chr10_+_105344798	-7922	+	NM_004210 U87864	-98955	+	BC043367 NM_001129742	-113693	-	AB385330 TSC_hg19_v1_chr10_-_105420936	68219	-	TSC_hg19_v1_chr10_-_105421464 AK294454	68760	-	TSC_hg19_v1_chr10_-_105437934 AK304828	85232	-	AK299620|NEURL|9148|neuralized homolog (Drosophila)##NM_004210|NEURL|9148|neuralized homolog (Drosophila)##U87864|NEURL|9148|neuralized homolog (Drosophila)##BC043367|CALHM3|119395|calcium homeostasis modulator 3##NM_001129742|CALHM3|119395|calcium homeostasis modulator 3##AK294454|SH3PXD2A|9644|SH3 and PX domains 2A##AK304828|SH3PXD2A|9644|SH3 and PX domains 2A	0.444238	CTCF.p2:-7:0.444
chr11	119600128	119600228	reg1016370.p2	6.603	+	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	-796	-	BC037832 NM_006288	-305935	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-306269	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	399368	-	AK299472 TSC_hg19_v1_chr11_-_120008323	408094	-	AB464321 CU675956 EU446943 TSC_hg19_v1_chr11_-_120008772	408577	-	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29##EU446943|TRIM29|23650|tripartite motif containing 29	0.867788	CTCF.p2:22:0.868
chr7	40174491	40174627	reg1017174.p2	6.603	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-28	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	-428	-	AJ297709 AJ297710 TSC_hg19_v1_chr7_+_39990171	-184418	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	50	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	1568126	-	NM_000168	2102058	-	AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AJ297709|CDK13|8621|cyclin-dependent kinase 13##AJ297710|CDK13|8621|cyclin-dependent kinase 13##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##NM_000168|GLI3|2737|GLI family zinc finger 3	0.964183	CTCF.p2:-9:0.964
chr9	5833058	5833214	reg1017706.p1	6.603	+	TSC_hg19_v1_chr9_-_5833082 NM_024896	-58	-	TSC_hg19_v1_chr9_-_5833067 AK127218	-69	-	AL834191 AB058718 TSC_hg19_v1_chr9_-_5833045 BC136771 BC136773 BC144404	-185	-	U06654 BC014423 AK312149 NM_005511 U06452	57718	+	BC108654 TSC_hg19_v1_chr9_-_5968443	135272	-	TSC_hg19_v1_chr9_-_6007953 NM_001017969	174828	-	NM_024896|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AK127218|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AL834191|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AB058718|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136771|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136773|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC144404|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##U06654|MLANA|2315|melan-A##BC014423|MLANA|2315|melan-A##AK312149|MLANA|2315|melan-A##NM_005511|MLANA|2315|melan-A##U06452|MLANA|2315|melan-A##NM_001017969|KIAA2026|158358|KIAA2026	0.185132	
chr1	69771446	69771570	reg1021818.p1	6.602	+	TSC_hg19_v1_chr1_-_68962766 AK225735 BC003511 AB281187 AB281274 AK000361 AK299324 NM_001114120 NM_017779	-808727	-	CU688044 BC065304 BC011743 BC035506 BC041580 TSC_hg19_v1_chr1_-_68962723	-808807	-	AK289925 BC075035 BC075036 NM_000329 U18991	-855872	-	TSC_hg19_v1_chr1_+_70032819 BC080568	261330	+	AK294206 TSC_hg19_v1_chr1_+_70033988	262463	+	TSC_hg19_v1_chr1_+_70034033 AF498274	262572	+	AK225735|DEPDC1|55635|DEP domain containing 1##BC003511|DEPDC1|55635|DEP domain containing 1##AB281187|DEPDC1|55635|DEP domain containing 1##AB281274|DEPDC1|55635|DEP domain containing 1##AK000361|DEPDC1|55635|DEP domain containing 1##AK299324|DEPDC1|55635|DEP domain containing 1##NM_001114120|DEPDC1|55635|DEP domain containing 1##NM_017779|DEPDC1|55635|DEP domain containing 1##BC065304|DEPDC1|55635|DEP domain containing 1##BC011743|DEPDC1|55635|DEP domain containing 1##BC035506|DEPDC1|55635|DEP domain containing 1##BC041580|DEPDC1|55635|DEP domain containing 1##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##AF498274|LRRC7|57554|leucine rich repeat containing 7	0.023293	
chr22	38658206	38658360	reg1021190.p1	6.602	+	NM_001161573	-59257	+	BC015037 TSC_hg19_v1_chr22_+_38598094 AB025247	-60197	+	NM_001161572 NM_001161574 NM_012323 TSC_hg19_v1_chr22_+_38597996 AK002001 BC067751 AK300932 AJ010857	-60306	+	NM_001195071	10386	-	TSC_hg19_v1_chr22_-_38668943 CR749859	10662	-	TSC_hg19_v1_chr22_-_38669012 BC015489 AB097053 AK309071 AK292652 NM_001195072 NM_012264	10725	-	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001195071|TMEM184B|25829|transmembrane protein 184B##CR749859|TMEM184B|25829|transmembrane protein 184B##BC015489|TMEM184B|25829|transmembrane protein 184B##AB097053|TMEM184B|25829|transmembrane protein 184B##AK309071|TMEM184B|25829|transmembrane protein 184B##AK292652|TMEM184B|25829|transmembrane protein 184B##NM_001195072|TMEM184B|25829|transmembrane protein 184B##NM_012264|TMEM184B|25829|transmembrane protein 184B	0.819534	CTCF.p2:-9:0.820
chr5	10576589	10576764	reg1022956.p1	6.602	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-12234	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-134524	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-134673	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	184583	-	TSC_hg19_v1_chr5_-_10761341 BC002726	184666	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	184723	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.0	
chr7	27784840	27784941	reg1018510.p2	6.602	+	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-5071	+	BC001764 TSC_hg19_v1_chr7_+_27779809	-5081	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	-5115	+	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	435311	-	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	435516	-	L05913 NM_182899	554049	+	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5	0.032927	
chrX	17553494	17553622	reg1021896.p1	6.602	+	TSC_hg19_v1_chrX_+_17393877 GQ988776	-159678	+	TSC_hg19_v1_chrX_+_17393806 BC136415 BC171763	-159747	+	TSC_hg19_v1_chrX_+_17393541 AY436752 NM_198270	-160016	+	AY456992 NM_001136024	99854	+	TSC_hg19_v1_chrX_+_17755572 BC026159 NM_001037535 NM_001037536 NM_001037540 NM_006746 AK313993 BC009193 AF160728	202037	+	AK056214 AK298873 AK314631 NM_001172732 NM_001172739 NM_001172743 NM_021785	325847	-	GQ988776|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC136415|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC171763|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AY436752|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_198270|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC026159|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037535|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037536|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037540|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_006746|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AK313993|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##BC009193|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AF160728|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AK056214|RAI2|10742|retinoic acid induced 2##AK298873|RAI2|10742|retinoic acid induced 2##AK314631|RAI2|10742|retinoic acid induced 2##NM_001172732|RAI2|10742|retinoic acid induced 2##NM_001172739|RAI2|10742|retinoic acid induced 2##NM_001172743|RAI2|10742|retinoic acid induced 2##NM_021785|RAI2|10742|retinoic acid induced 2	0.983157	CTCF.p2:-16:0.983
chr15	30218145	30218239	reg1018254.p1	6.601	+	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-103569	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-103850	-	NM_015307	-355266	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	467520	-	TSC_hg19_v1_chr15_+_30918372 BC071990	700194	+	BC105788 NM_001039841	700686	+	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B	0.919185	CTCF.p2:4:0.919
chr2	201990434	201990592	reg1022168.p2	6.601	+	TSC_hg19_v1_chr2_+_201983419 AK289913 AK315208	-7041	+	AF015450 NM_001127183 AK308767 TSC_hg19_v1_chr2_+_201983395	-7182	+	AF009616 TSC_hg19_v1_chr2_+_201981056 AF010127 U97074 AK315924 BC001602 AB209600	-9472	+	NM_001202518 AK304585 AF041462	7209	+	AF041459 NM_001202515	14484	+	NM_001206524 NM_001206542 NM_001230 NM_032974 NM_032976 NM_032977	57107	+	AK289913|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK315208|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF015450|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001127183|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK308767|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF009616|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF010127|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##U97074|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK315924|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##BC001602|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AB209600|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202518|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK304585|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF041462|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF041459|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202515|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	0.040466	
chr6	167764974	167765105	reg1021570.p1	6.601	+	AK093039 AK225984 AX747876 NM_031949 BC030650 AK301755 BC047411 AK314450 AY026506 CU688966 CU690408	-26422	+	AK091987 AX747293 NM_001143947 NM_018974 AJ422141 AJ508812 BC098248 BC099718 BC105635	-60163	+	NM_001145121	-180959	+	BC068592 U03399 BC063451 BC033909 BC034995 NM_004610	32918	-	AB016901 BC027853 TSC_hg19_v1_chr6_-_168197551	432501	-	TSC_hg19_v1_chr6_+_168227559 NM_001040000 NM_001207008 U02478 AB209420	462627	+	AK093039|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK225984|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##NM_031949|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC030650|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK301755|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC047411|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK314450|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AY026506|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK091987|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_001143947|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_018974|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ422141|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ508812|UNC93A|54346|unc-93 homolog A (C. elegans)##BC098248|UNC93A|54346|unc-93 homolog A (C. elegans)##BC099718|UNC93A|54346|unc-93 homolog A (C. elegans)##BC105635|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_001145121|TCP10L2|401285|t-complex 10-like 2 (mouse)##BC068592|TCP10|6953|t-complex 10 homolog (mouse)##U03399|TCP10|6953|t-complex 10 homolog (mouse)##BC063451|TCP10|6953|t-complex 10 homolog (mouse)##NM_004610|TCP10|6953|t-complex 10 homolog (mouse)##AB016901|C6orf123|26238|chromosome 6 open reading frame 123##BC027853|C6orf123|26238|chromosome 6 open reading frame 123##NM_001040000|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##NM_001207008|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##U02478|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##AB209420|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4	0.718788	CTCF.p2:7:0.719
chr9	90282280	90282414	reg1022443.p1	6.601	+	TSC_hg19_v1_chr9_+_90112781 NM_004938 X76104 BC003614 AK295119	-169479	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	-169761	+	AK127445 NM_001001709 BC132741 BC136791 HQ258059	-518746	+	NM_001912 NM_145918 TSC_hg19_v1_chr9_+_90341001	58646	+	AK075100 TSC_hg19_v1_chr9_+_90341022 BX648848	58675	+	AL832167 BX647102 BX647434 TSC_hg19_v1_chr9_+_90341033 BX537395 BX647101 BX647413 BX647435 BX648849 BX649140 X12451 AF304301 BC142983 AF217997	58693	+	NM_004938|DAPK1|1612|death-associated protein kinase 1##X76104|DAPK1|1612|death-associated protein kinase 1##AK295119|DAPK1|1612|death-associated protein kinase 1##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##NM_001912|CTSL1|1514|cathepsin L1##NM_145918|CTSL1|1514|cathepsin L1##AK075100|CTSL1|1514|cathepsin L1##BX648848|CTSL1|1514|cathepsin L1##AL832167|CTSL1|1514|cathepsin L1##BX647102|CTSL1|1514|cathepsin L1##BX647434|CTSL1|1514|cathepsin L1##BX537395|CTSL1|1514|cathepsin L1##BX647101|CTSL1|1514|cathepsin L1##BX647413|CTSL1|1514|cathepsin L1##BX647435|CTSL1|1514|cathepsin L1##BX648849|CTSL1|1514|cathepsin L1##BX649140|CTSL1|1514|cathepsin L1##X12451|CTSL1|1514|cathepsin L1##AF304301|CTSL1|1514|cathepsin L1##BC142983|CTSL1|1514|cathepsin L1##AF217997|CTSL1|1514|cathepsin L1	0.966287	CTCF.p2:11:0.966
chrX	77165955	77166076	reg1021624.p1	6.601	+	TSC_hg19_v1_chrX_+_77154964 NM_001866 Z14244 BC018386 AK311879 DQ890544 EU176472 BT009767 CR450332 CR542124	-11012	+	CU687464 CU687640 EU831642 EU831726 BC041014 TSC_hg19_v1_chrX_-_77150929 AY358691 BC060842 AK075394 AK223131 AK296743 AK314309 AL136636 DQ000004 BC050657 BC063037 AK172735 NM_032121 AK294943	-15017	-	TSC_hg19_v1_chrX_-_77041703 AB208928 AK308419 AK307791 U72936 U72937 U72938 NM_000489 NM_138270	-124289	-	TSC_hg19_v1_chrX_+_77166193 AK310748 NM_000052 L06133	178	+	AB117973 TSC_hg19_v1_chrX_+_77166237 AK096667 AB208828	227	+	NM_001029891 AB528771	59121	-	NM_001866|COX7B|1349|cytochrome c oxidase subunit VIIb##Z14244|COX7B|1349|cytochrome c oxidase subunit VIIb##BC018386|COX7B|1349|cytochrome c oxidase subunit VIIb##AK311879|COX7B|1349|cytochrome c oxidase subunit VIIb##DQ890544|COX7B|1349|cytochrome c oxidase subunit VIIb##EU176472|COX7B|1349|cytochrome c oxidase subunit VIIb##BT009767|COX7B|1349|cytochrome c oxidase subunit VIIb##CR450332|COX7B|1349|cytochrome c oxidase subunit VIIb##CR542124|COX7B|1349|cytochrome c oxidase subunit VIIb##EU831642|MAGT1|84061|magnesium transporter 1##EU831726|MAGT1|84061|magnesium transporter 1##BC041014|MAGT1|84061|magnesium transporter 1##AY358691|MAGT1|84061|magnesium transporter 1##BC060842|MAGT1|84061|magnesium transporter 1##AK075394|MAGT1|84061|magnesium transporter 1##AK223131|MAGT1|84061|magnesium transporter 1##AK296743|MAGT1|84061|magnesium transporter 1##AK314309|MAGT1|84061|magnesium transporter 1##AL136636|MAGT1|84061|magnesium transporter 1##DQ000004|MAGT1|84061|magnesium transporter 1##BC050657|MAGT1|84061|magnesium transporter 1##BC063037|MAGT1|84061|magnesium transporter 1##AK172735|MAGT1|84061|magnesium transporter 1##NM_032121|MAGT1|84061|magnesium transporter 1##AK294943|MAGT1|84061|magnesium transporter 1##AB208928|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##AK308419|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##AK307791|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##U72936|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##U72937|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##U72938|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##NM_000489|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##NM_138270|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##NM_001029891|PGAM4|441531|phosphoglycerate mutase family member 4	0.743535	CTCF.p2:-3:0.744
chr12	109531331	109531429	reg1019623.p1	6.600	+	BC070489 TSC_hg19_v1_chr12_-_109531278 AY754389 AK309062 NM_001001655 NM_001145374 NM_001145375 NM_001205179 NM_001205180	-99	-	TSC_hg19_v1_chr12_+_109490413 NM_032663 BC004868 AJ586136 CU678780 DQ893401 DQ896783	-40956	+	BC033587 NM_018711 TSC_hg19_v1_chr12_-_109458878	-72519	-	TSC_hg19_v1_chr12_+_109535398 NM_080911 AK313552 Y09008	4029	+	NM_003362 TSC_hg19_v1_chr12_+_109535998 CR749342 AK299416 AK291341 X15653 BC050634 BC015205 CR541673 GQ129388 GQ129389	4646	+	AY701053 TSC_hg19_v1_chr12_+_109551084	19682	+	BC070489|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##AY754389|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##AK309062|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001001655|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001145374|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001145375|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001205179|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001205180|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_032663|USP30|84749|ubiquitin specific peptidase 30##BC004868|USP30|84749|ubiquitin specific peptidase 30##AJ586136|USP30|84749|ubiquitin specific peptidase 30##DQ893401|USP30|84749|ubiquitin specific peptidase 30##DQ896783|USP30|84749|ubiquitin specific peptidase 30##BC033587|SVOP|55530|SV2 related protein homolog (rat)##NM_018711|SVOP|55530|SV2 related protein homolog (rat)##NM_080911|UNG|7374|uracil-DNA glycosylase##AK313552|UNG|7374|uracil-DNA glycosylase##Y09008|UNG|7374|uracil-DNA glycosylase##NM_003362|UNG|7374|uracil-DNA glycosylase##CR749342|UNG|7374|uracil-DNA glycosylase##AK299416|UNG|7374|uracil-DNA glycosylase##AK291341|UNG|7374|uracil-DNA glycosylase##X15653|UNG|7374|uracil-DNA glycosylase##BC050634|UNG|7374|uracil-DNA glycosylase##BC015205|UNG|7374|uracil-DNA glycosylase##CR541673|UNG|7374|uracil-DNA glycosylase##GQ129388|UNG|7374|uracil-DNA glycosylase##GQ129389|UNG|7374|uracil-DNA glycosylase	0.999683	CTCF.p2:-4:1.000
chr6	44189409	44189510	reg1021961.p2	6.600	+	NM_001078174 NM_004955 TSC_hg19_v1_chr6_+_44187322 BC095398 AK090491 AK304285 AX746476 AB490708 AX775997 U81375 AF079117	-2103	+	NM_007058 AK314054 BC033733	-62898	+	TSC_hg19_v1_chr6_+_44095393 AK093629 AX748232 NM_018426 AK309791	-94053	+	TSC_hg19_v1_chr6_+_44191331 NM_001078175 NM_001078176 BC001382 AK293558 BC008954 NM_001078177	1884	+	TSC_hg19_v1_chr6_+_44191517 AK090615 AB490709	2119	+	TSC_hg19_v1_chr6_+_44195011 DQ892133 DQ895327 CU679195	5569	+	NM_001078174|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_004955|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC095398|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK090491|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK304285|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AB490708|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AX775997|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##U81375|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AF079117|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_007058|CAPN11|11131|calpain 11##AK314054|CAPN11|11131|calpain 11##BC033733|CAPN11|11131|calpain 11##AK093629|TMEM63B|55362|transmembrane protein 63B##NM_018426|TMEM63B|55362|transmembrane protein 63B##AK309791|TMEM63B|55362|transmembrane protein 63B##NM_001078175|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078176|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC001382|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK293558|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##BC008954|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##NM_001078177|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK090615|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AB490709|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##DQ892133|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##DQ895327|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1	0.941314	CTCF.p2:-7:0.941
chrX	130862702	130862863	reg1017330.p1	6.600	+	BC137050 AB529233 NM_001004486	-184784	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-439370	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-439520	-	TSC_hg19_v1_chrX_-_130964633 AK097911	101869	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	294539	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	294858	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.101301	
chr1	14292439	14292562	reg1022342.p1	6.599	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-216559	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-216577	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-216615	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	632694	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	958219	+	AY505121 NM_001018001	963795	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.497202	CTCF.p2:-20:0.497
chr12	7126232	7126359	reg1020639.p1	6.599	+	AB527314 AM393271 TSC_hg19_v1_chr12_-_7125813 BC065194 AK296164 AK296171 AK311727 BX647983 AK296145 BX648009 NM_005768	-483	-	TSC_hg19_v1_chr12_+_7080081 AK298745 CU691116 BC009856 U72514 U56427	-46162	+	TSC_hg19_v1_chr12_+_7080078 AK291597 AK307177	-46218	+	NM_001734 NM_201442 TSC_hg19_v1_chr12_+_7168021 AK290295 M18767 BC056903 J04080 AM886411	41762	+	BC007010 TSC_hg19_v1_chr12_+_7169195	42903	+	TSC_hg19_v1_chr12_-_7245038 M14058 X04701 AK024951 AK222481 AK222491 AK303750 BC035220 NM_001733	118729	-	AM393271|LPCAT3|10162|lysophosphatidylcholine acyltransferase 3##BC065194|LPCAT3|10162|lysophosphatidylcholine acyltransferase 3##AK296164|LPCAT3|10162|lysophosphatidylcholine acyltransferase 3##AK296171|LPCAT3|10162|lysophosphatidylcholine acyltransferase 3##AK311727|LPCAT3|10162|lysophosphatidylcholine acyltransferase 3##BX647983|LPCAT3|10162|lysophosphatidylcholine acyltransferase 3##AK296145|LPCAT3|10162|lysophosphatidylcholine acyltransferase 3##BX648009|LPCAT3|10162|lysophosphatidylcholine acyltransferase 3##NM_005768|LPCAT3|10162|lysophosphatidylcholine acyltransferase 3##AK298745|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##U72514|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##U56427|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##AK291597|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##NM_001734|C1S|716|complement component 1, s subcomponent##NM_201442|C1S|716|complement component 1, s subcomponent##AK290295|C1S|716|complement component 1, s subcomponent##M18767|C1S|716|complement component 1, s subcomponent##BC056903|C1S|716|complement component 1, s subcomponent##J04080|C1S|716|complement component 1, s subcomponent##AM886411|C1S|716|complement component 1, s subcomponent##M14058|C1R|715|complement component 1, r subcomponent##X04701|C1R|715|complement component 1, r subcomponent##AK024951|C1R|715|complement component 1, r subcomponent##AK222481|C1R|715|complement component 1, r subcomponent##AK222491|C1R|715|complement component 1, r subcomponent##AK303750|C1R|715|complement component 1, r subcomponent##BC035220|C1R|715|complement component 1, r subcomponent##NM_001733|C1R|715|complement component 1, r subcomponent	0.0268	
chr1	87617660	87617840	reg1022072.p2	6.599	+	TSC_hg19_v1_chr1_+_87595568 BC030523	-22201	+	AB007917 TSC_hg19_v1_chr1_+_87380462	-237293	+	TSC_hg19_v1_chr1_+_87380374 BC025384 BC025990 NM_001134492 NM_012262 AK023260 AB024568 BC108735	-237397	+	NM_006769 U24576 TSC_hg19_v1_chr1_+_87794164	176407	+	AK292578 TSC_hg19_v1_chr1_+_87794564	176809	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	176931	+	BC030523|LOC339524|339524|uncharacterized LOC339524##AB007917|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025384|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025990|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_001134492|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_012262|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AK023260|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AB024568|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC108735|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_006769|LMO4|8543|LIM domain only 4##U24576|LMO4|8543|LIM domain only 4##AK292578|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4	0.025621	
chr22	20450820	20450950	reg1022977.p1	6.599	+	BC072398 TSC_hg19_v1_chr22_-_20427830	-23055	-	NM_001242313	-73217	+	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	-143316	-	NM_015672	10900	-	TSC_hg19_v1_chr22_+_20748463 BC056902 X92715 AK291358 AK299569 NM_003426 BC048295 BC013741	297560	+	AB052951 TSC_hg19_v1_chr22_-_20792077	341177	-	BC072398|PI4KAP1|728233|phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1##NM_001242313|TMEM191B|728229|transmembrane protein 191B##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_015672|RIMBP3|85376|RIMS binding protein 3##BC056902|ZNF74|7625|zinc finger protein 74##X92715|ZNF74|7625|zinc finger protein 74##AK291358|ZNF74|7625|zinc finger protein 74##AK299569|ZNF74|7625|zinc finger protein 74##NM_003426|ZNF74|7625|zinc finger protein 74##BC048295|ZNF74|7625|zinc finger protein 74##BC013741|ZNF74|7625|zinc finger protein 74##AB052951|SCARF2|91179|scavenger receptor class F, member 2	0.989232	CTCF.p2:-18:0.989
chr3	141845167	141845324	reg1022006.p2	6.599	+	BC002405 AK303634 U18422 BC007976 AK303181 TSC_hg19_v1_chr3_-_141747469 NM_001178141 NM_001178142 NM_006286	-97775	-	AL080206 NM_001178140	-126037	-	TSC_hg19_v1_chr3_+_141595539 U51478 CU680074	-249668	+	TSC_hg19_v1_chr3_-_141868338 AK314786 BC013993 U35117 NM_001178138 NM_001178139	23079	-	DQ891607 DQ894800 TSC_hg19_v1_chr3_-_141944428 AK313792 BX648681 BC032470 AK127641 BX648359 AK310761	99120	-	TSC_hg19_v1_chr3_-_141944444 NM_001039547	99209	-	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AL080206|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178140|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U51478|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK314786|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC013993|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U35117|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178138|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178139|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##DQ891607|GK5|256356|glycerol kinase 5 (putative)##DQ894800|GK5|256356|glycerol kinase 5 (putative)##AK313792|GK5|256356|glycerol kinase 5 (putative)##BX648681|GK5|256356|glycerol kinase 5 (putative)##BC032470|GK5|256356|glycerol kinase 5 (putative)##AK127641|GK5|256356|glycerol kinase 5 (putative)##BX648359|GK5|256356|glycerol kinase 5 (putative)##AK310761|GK5|256356|glycerol kinase 5 (putative)##NM_001039547|GK5|256356|glycerol kinase 5 (putative)	0.932274	CTCF.p2:-32:0.932
chr7	144552095	144552204	reg1020135.p1	6.599	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-19013	-	TSC_hg19_v1_chr7_-_144533086 AK091736	-19060	-	NM_001080413 AB528776	-444830	-	NM_014141	1261303	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	1261735	+	TSC_hg19_v1_chr7_+_148036552 CR933671	3484416	+	AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##AK091736|TPK1|27010|thiamin pyrophosphokinase 1##NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##CR933671|CNTNAP2|26047|contactin associated protein-like 2	0.973534	CTCF.p2:-27:0.974
chr14	97766140	97766274	reg1023324.p1	6.598	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-502492	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-797423	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-797461	+	AK098639 NM_182560	1411742	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	1971410	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	1971683	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.823029	CTCF.p2:-6:0.590	CTCF.p2:-9:0.233
chr2	224662964	224663088	reg1019902.p2	6.598	+	TSC_hg19_v1_chr2_-_224467145 NM_003469	-195847	-	TSC_hg19_v1_chr2_-_224467100 BC022509	-195919	-	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	-195960	-	AF393369 BC021898 TSC_hg19_v1_chr2_-_224702284 AK025338 AK299026	39223	-	TSC_hg19_v1_chr2_-_224702300 BC009606 NM_001039569	39284	-	TSC_hg19_v1_chr2_-_224810010 AF411977 AB527455 CU691898	146967	-	NM_003469|SCG2|7857|secretogranin II##BC022509|SCG2|7857|secretogranin II##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II##AF393369|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##BC021898|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK025338|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK299026|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##BC009606|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##NM_001039569|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AF411977|WDFY1|57590|WD repeat and FYVE domain containing 1	0.664408	CTCF.p2:9:0.664
chr6	6222522	6222627	reg1020110.p2	6.598	+	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-214877	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	-215433	-	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-960884	+	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	98311	-	TSC_hg19_v1_chr6_-_6320897 NM_000129	98336	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	366376	+	BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86	0.045015	
chr7	108446393	108446507	reg1019683.p2	6.598	+	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-236076	+	TSC_hg19_v1_chr7_+_108210292 AK092204	-236152	+	NM_012328 TSC_hg19_v1_chr7_+_108210266	-236216	+	NM_001024607	78186	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	2284673	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	2756034	-	AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AK092204|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_012328|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)	0.724456	CTCF.p2:-13:0.724
chr9	33517533	33517660	reg1021148.p1	6.598	+	TSC_hg19_v1_chr9_-_33473921 NM_022917 NM_139235	-43666	-	TSC_hg19_v1_chr9_-_33473890 BC020450 AK026258 AK293969	-43700	-	TSC_hg19_v1_chr9_-_33473861 BC030139	-43743	-	NM_001244752	6814	+	TSC_hg19_v1_chr9_+_33624216 M62898	106622	+	AB298285 NM_001197097 NM_007343 AB528734 X71345 X72781 TSC_hg19_v1_chr9_+_33750676 BC030238 AY052783 AB298286 NM_001197098	233044	+	NM_022917|NOL6|65083|nucleolar protein family 6 (RNA-associated)##NM_139235|NOL6|65083|nucleolar protein family 6 (RNA-associated)##BC020450|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AK026258|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AK293969|NOL6|65083|nucleolar protein family 6 (RNA-associated)##BC030139|NOL6|65083|nucleolar protein family 6 (RNA-associated)##NM_001244752|ANKRD18B|441459|ankyrin repeat domain 18B##M62898|ANXA2P2|304|annexin A2 pseudogene 2##AB298285|PRSS3|5646|protease, serine, 3##NM_001197097|PRSS3|5646|protease, serine, 3##NM_007343|PRSS3|5646|protease, serine, 3##X71345|PRSS3|5646|protease, serine, 3##X72781|PRSS3|5646|protease, serine, 3##BC030238|PRSS3|5646|protease, serine, 3##AY052783|PRSS3|5646|protease, serine, 3##AB298286|PRSS3|5646|protease, serine, 3##NM_001197098|PRSS3|5646|protease, serine, 3	0.870225	CTCF.p2:-14:0.870
chr10	7567309	7567490	reg1002226.p1	6.597	+	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	-113965	-	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	-116149	-	TSC_hg19_v1_chr10_+_6622460 AY007155	-944919	+	AK027849 TSC_hg19_v1_chr10_-_7659249	91818	-	BC004282 NM_032817	94225	-	AK027831 AB075833 TSC_hg19_v1_chr10_-_7682819	115381	-	BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##AY007155|LOC439949|439949|uncharacterized LOC439949##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC004282|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_032817|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK027831|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AB075833|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.0	
chr2	97523658	97523838	reg1001186.p1	6.597	+	TSC_hg19_v1_chr2_-_97523744 AB528054 CU689148 AF151034 BC031303 AB209367 AK312193 NM_016466	-6	-	AF492401 AY196212 BC107056 AK057011 AK092564 AX747600 NM_144994	-14003	-	TSC_hg19_v1_chr2_+_97482006 BC037272 AK126847 NM_017623 NM_199078 BC007199 AF216965 AK000025 CU675553	-41266	+	TSC_hg19_v1_chr2_-_97535634 BC109104 BC109103	11883	-	TSC_hg19_v1_chr2_-_97535818 AY358842 NM_017789	12013	-	AF151068 NM_001172667	37128	-	AF151034|ANKRD39|51239|ankyrin repeat domain 39##BC031303|ANKRD39|51239|ankyrin repeat domain 39##AK312193|ANKRD39|51239|ankyrin repeat domain 39##NM_016466|ANKRD39|51239|ankyrin repeat domain 39##AF492401|ANKRD23|200539|ankyrin repeat domain 23##AY196212|ANKRD23|200539|ankyrin repeat domain 23##BC107056|ANKRD23|200539|ankyrin repeat domain 23##AK057011|ANKRD23|200539|ankyrin repeat domain 23##AK092564|ANKRD23|200539|ankyrin repeat domain 23##NM_144994|ANKRD23|200539|ankyrin repeat domain 23##BC037272|CNNM3|26505|cyclin M3##AK126847|CNNM3|26505|cyclin M3##NM_017623|CNNM3|26505|cyclin M3##NM_199078|CNNM3|26505|cyclin M3##BC007199|CNNM3|26505|cyclin M3##AF216965|CNNM3|26505|cyclin M3##AK000025|CNNM3|26505|cyclin M3##BC109104|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##BC109103|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##AY358842|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##NM_017789|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##AF151068|FAM178B|51252|family with sequence similarity 178, member B##NM_001172667|FAM178B|51252|family with sequence similarity 178, member B	0.0	
chr3	153688643	153688794	reg1023357.p1	6.597	+	AF086445 NM_001101337	-486435	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-808670	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-808692	+	AK127282 NM_001251962	150073	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	150484	+	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	353542	-	AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36	0.0	
chr4	10405482	10405621	reg1021668.p1	6.597	+	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-287015	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-287073	-	AK222764 AK225276 TSC_hg19_v1_chr4_-_10118453	-287101	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	53459	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	280850	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	1024981	-	NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##AK222764|WDR1|9948|WD repeat domain 1##AK225276|WDR1|9948|WD repeat domain 1##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1	0.912672	CTCF.p2:19:0.889
chr6	56622570	56622712	reg1026007.p1	6.597	+	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	-115002	-	BC038763 TSC_hg19_v1_chr6_-_56407722	-214933	-	AF330693 TSC_hg19_v1_chr6_-_56258945	-363717	-	TSC_hg19_v1_chr6_-_56708446 U31850	85831	-	AK294830 TSC_hg19_v1_chr6_-_56716493	93811	-	AK299898 TSC_hg19_v1_chr6_-_56716715	94073	-	AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin##AF330693|COL21A1|81578|collagen, type XXI, alpha 1##U31850|DST|667|dystonin##AK294830|DST|667|dystonin##AK299898|DST|667|dystonin	0.87191	CTCF.p2:11:0.872
chr8	109278802	109278938	reg1024687.p1	6.597	+	TSC_hg19_v1_chr8_-_109260947 BC017887 AK313186 BC005944 BC016706 BC021679 U94175 U62962 BC008419 NM_001568 AK310902	-17885	-	AB527268 CR457029 CR542275 CU674376 CU677689 CU678957 DQ892278 DQ895478 BC000734 TSC_hg19_v1_chr8_-_109260938 U54562 U85947	-17936	-	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	-182996	-	TSC_hg19_v1_chr8_+_109455865 BC021667 NM_014673 AK222615 BC007027 BC020753	176982	+	TSC_hg19_v1_chr8_+_109455874 AK290974 D14659 AB384437 CR457402 CU676696 CU692380 HQ447150	177010	+	AK055230 NM_153015 BC033057 BC030710	520936	-	BC017887|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK313186|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC005944|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC016706|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC021679|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U94175|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U62962|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC008419|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##NM_001568|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK310902|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR457029|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR542275|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ892278|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ895478|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC000734|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U54562|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U85947|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2##BC021667|TTC35|9694|tetratricopeptide repeat domain 35##NM_014673|TTC35|9694|tetratricopeptide repeat domain 35##AK222615|TTC35|9694|tetratricopeptide repeat domain 35##BC007027|TTC35|9694|tetratricopeptide repeat domain 35##BC020753|TTC35|9694|tetratricopeptide repeat domain 35##AK290974|TTC35|9694|tetratricopeptide repeat domain 35##D14659|TTC35|9694|tetratricopeptide repeat domain 35##CR457402|TTC35|9694|tetratricopeptide repeat domain 35##HQ447150|TTC35|9694|tetratricopeptide repeat domain 35##AK055230|TMEM74|157753|transmembrane protein 74##NM_153015|TMEM74|157753|transmembrane protein 74##BC030710|TMEM74|157753|transmembrane protein 74	0.01535	
chr10	92631085	92631218	reg1022719.p1	6.596	+	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	-13418	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	-13705	-	TSC_hg19_v1_chr10_+_91498725 AK025628	-1132384	+	TSC_hg19_v1_chr10_+_92631241 BC006991	106	+	TSC_hg19_v1_chr10_+_92631730 NM_001104546 NM_006413 AL833628 AK296196 U77665 AK312900 AK225532 DQ893181 DQ896488	571	+	AB528537 DQ892852 DQ896099 AY903446 BC005191 AK290960 BC018667 TSC_hg19_v1_chr10_-_92680845	49665	-	BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK025628|KIF20B|9585|kinesin family member 20B##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit##NM_001104546|RPP30|10556|ribonuclease P/MRP 30kDa subunit##NM_006413|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AL833628|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK296196|RPP30|10556|ribonuclease P/MRP 30kDa subunit##U77665|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK312900|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK225532|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ893181|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ896488|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)	0.987347	CTCF.p2:7:0.987
chr13	91730448	91730589	reg1019968.p1	6.596	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3405649	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5357079	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7274018	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	320386	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	2148909	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3401308	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.961415	CTCF.p2:9:0.961
chr17	55191532	55191651	reg1020175.p2	6.596	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-28448	+	TSC_hg19_v1_chr17_+_55162639 NM_003488 BC000729 X97335	-28977	+	NM_021626 TSC_hg19_v1_chr17_+_55055513 AY358559 AF282618 AK027373 BC010078 AK298161 CU687218 BC072405 AF113214	-136087	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	142382	+	AK093888 AX748353 NM_170721	142782	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	735813	-	NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_003488|AKAP1|8165|A kinase (PRKA) anchor protein 1##BC000729|AKAP1|8165|A kinase (PRKA) anchor protein 1##X97335|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_021626|SCPEP1|59342|serine carboxypeptidase 1##AY358559|SCPEP1|59342|serine carboxypeptidase 1##AF282618|SCPEP1|59342|serine carboxypeptidase 1##AK027373|SCPEP1|59342|serine carboxypeptidase 1##BC010078|SCPEP1|59342|serine carboxypeptidase 1##AK298161|SCPEP1|59342|serine carboxypeptidase 1##BC072405|SCPEP1|59342|serine carboxypeptidase 1##AF113214|SCPEP1|59342|serine carboxypeptidase 1##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23	0.0	
chr20	49598102	49598250	reg1023891.p1	6.596	+	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-22808	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-23113	-	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	-50453	-	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	41481	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	560963	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	561099	-	BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.995552	CTCF.p2:6:0.996
chr7	30588530	30588621	reg1021308.p2	6.596	+	CU674304 TSC_hg19_v1_chr7_-_30544445 BC013937 BC005356 AK315608 BC019243 BC000625 NM_001199815 NM_001199816 NM_001199817 NM_024051	-44174	-	AY128682 AY128683 AY128684 AY128685 AY128686 AF113925 BC040339 AK300367 AK023969 NM_006092	-70254	-	TSC_hg19_v1_chr7_+_30324634 AY054122	-263919	+	NM_002047	45605	+	TSC_hg19_v1_chr7_-_30634379 AK096687	45797	-	TSC_hg19_v1_chr7_+_30634447 AK074524 AK295490 BC007722 AK310351 BC000065 D30658 BC007755 AB528358 DQ892773 DQ896021 U09587	45931	+	BC013937|GGCT|79017|gamma-glutamylcyclotransferase##BC005356|GGCT|79017|gamma-glutamylcyclotransferase##AK315608|GGCT|79017|gamma-glutamylcyclotransferase##BC019243|GGCT|79017|gamma-glutamylcyclotransferase##BC000625|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199815|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199816|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199817|GGCT|79017|gamma-glutamylcyclotransferase##NM_024051|GGCT|79017|gamma-glutamylcyclotransferase##AY128682|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128683|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128684|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128685|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128686|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AF113925|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC040339|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK300367|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK023969|NOD1|10392|nucleotide-binding oligomerization domain containing 1##NM_006092|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY054122|ZNRF2|223082|zinc and ring finger 2##NM_002047|GARS|2617|glycyl-tRNA synthetase##AK096687|LOC401320|401320|uncharacterized LOC401320##AK074524|GARS|2617|glycyl-tRNA synthetase##AK295490|GARS|2617|glycyl-tRNA synthetase##BC007722|GARS|2617|glycyl-tRNA synthetase##AK310351|GARS|2617|glycyl-tRNA synthetase##BC000065|GARS|2617|glycyl-tRNA synthetase##D30658|GARS|2617|glycyl-tRNA synthetase##BC007755|GARS|2617|glycyl-tRNA synthetase##DQ892773|GARS|2617|glycyl-tRNA synthetase##DQ896021|GARS|2617|glycyl-tRNA synthetase##U09587|GARS|2617|glycyl-tRNA synthetase	0.998994	CTCF.p2:-6:0.999
chrX	153755442	153755552	reg1021902.p1	6.595	+	X87193 AK057945 TSC_hg19_v1_chrX_-_153744557 BC002934 AK314682 AK024601 AK294116 NM_001171132 NM_001171133 NM_001171134 NM_021806	-11017	-	TSC_hg19_v1_chrX_-_153718996 NM_001142391 NM_001142392 NM_019848	-36495	-	TSC_hg19_v1_chrX_-_153718969 BC004966	-36542	-	AY114157 BC012114 NM_001099856 AF074382	14970	+	TSC_hg19_v1_chrX_-_153775062 BC000337 AK292304 AK302341	19535	-	TSC_hg19_v1_chrX_-_153775179 S58359 M27940 NM_000402	19651	-	X87193|FAM3A|60343|family with sequence similarity 3, member A##AK057945|FAM3A|60343|family with sequence similarity 3, member A##BC002934|FAM3A|60343|family with sequence similarity 3, member A##AK314682|FAM3A|60343|family with sequence similarity 3, member A##AK024601|FAM3A|60343|family with sequence similarity 3, member A##AK294116|FAM3A|60343|family with sequence similarity 3, member A##NM_001171132|FAM3A|60343|family with sequence similarity 3, member A##NM_001171133|FAM3A|60343|family with sequence similarity 3, member A##NM_001171134|FAM3A|60343|family with sequence similarity 3, member A##NM_021806|FAM3A|60343|family with sequence similarity 3, member A##NM_001142391|SLC10A3|8273|solute carrier family 10 (sodium/bile acid cotransporter family), member 3##NM_001142392|SLC10A3|8273|solute carrier family 10 (sodium/bile acid cotransporter family), member 3##NM_019848|SLC10A3|8273|solute carrier family 10 (sodium/bile acid cotransporter family), member 3##BC004966|SLC10A3|8273|solute carrier family 10 (sodium/bile acid cotransporter family), member 3##AY114157|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC012114|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##NM_001099856|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AF074382|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC000337|G6PD|2539|glucose-6-phosphate dehydrogenase##AK292304|G6PD|2539|glucose-6-phosphate dehydrogenase##AK302341|G6PD|2539|glucose-6-phosphate dehydrogenase##S58359|G6PD|2539|glucose-6-phosphate dehydrogenase##M27940|G6PD|2539|glucose-6-phosphate dehydrogenase##NM_000402|G6PD|2539|glucose-6-phosphate dehydrogenase	0.0	
chr11	83527743	83527871	reg1020723.p1	6.594	+	AK299778 CR933674 NM_001142702	-134356	-	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	-530402	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	-530774	-	AK294375 AK126776 AK295624 NM_001142700	456469	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	500574	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	1106425	-	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)	0.993481	CTCF.p2:18:0.993
chr5	122759143	122759311	reg1019868.p1	6.594	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-83	-	NM_001136239 AK297992 AF272898 AF272899	-334383	+	TSC_hg19_v1_chr5_-_122372418 AK304053 NM_000943	-386803	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	88655	+	BC131507 AB033107 BC151226 NM_020747	1321561	-	NM_001146319 AK316288 AK300154	2936587	+	BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##AK304053|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##NM_000943|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3	0.914718	CTCF.p2:-9:0.915
chr7	108025657	108025795	reg1021809.p2	6.594	+	AJ001057 AB385311 NM_001037132	-145174	-	BC142619 BC140804 BC144591 AF028816 AK300385 NM_007356	-254934	-	AB384752 TSC_hg19_v1_chr7_-_107643594 BC113455 M61916 BX648251 AK303501 AK309921 AK307611 BC044633 BC052598 NM_002291	-382121	-	TSC_hg19_v1_chr7_-_108096830 BC114570 BC115736 AB002341 BX538010 AK299870 BC098401 NM_001193582 NM_001193583 NM_001193584 NM_005010	71203	-	TSC_hg19_v1_chr7_-_108142934 BC005203 AK002115	117246	-	AL834147 TSC_hg19_v1_chr7_-_108166546	140807	-	AJ001057|NRCAM|4897|neuronal cell adhesion molecule##NM_001037132|NRCAM|4897|neuronal cell adhesion molecule##BC142619|LAMB4|22798|laminin, beta 4##BC140804|LAMB4|22798|laminin, beta 4##BC144591|LAMB4|22798|laminin, beta 4##AF028816|LAMB4|22798|laminin, beta 4##AK300385|LAMB4|22798|laminin, beta 4##NM_007356|LAMB4|22798|laminin, beta 4##BC113455|LAMB1|3912|laminin, beta 1##M61916|LAMB1|3912|laminin, beta 1##BX648251|LAMB1|3912|laminin, beta 1##AK303501|LAMB1|3912|laminin, beta 1##AK309921|LAMB1|3912|laminin, beta 1##AK307611|LAMB1|3912|laminin, beta 1##BC044633|LAMB1|3912|laminin, beta 1##BC052598|LAMB1|3912|laminin, beta 1##NM_002291|LAMB1|3912|laminin, beta 1##BC114570|NRCAM|4897|neuronal cell adhesion molecule##BC115736|NRCAM|4897|neuronal cell adhesion molecule##AB002341|NRCAM|4897|neuronal cell adhesion molecule##BX538010|NRCAM|4897|neuronal cell adhesion molecule##AK299870|NRCAM|4897|neuronal cell adhesion molecule##BC098401|NRCAM|4897|neuronal cell adhesion molecule##NM_001193582|NRCAM|4897|neuronal cell adhesion molecule##NM_001193583|NRCAM|4897|neuronal cell adhesion molecule##NM_001193584|NRCAM|4897|neuronal cell adhesion molecule##NM_005010|NRCAM|4897|neuronal cell adhesion molecule##BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8##AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8##AL834147|PNPLA8|50640|patatin-like phospholipase domain containing 8	0.0	
chr10	132119769	132119893	reg1022924.p1	6.593	+	TSC_hg19_v1_chr10_+_131934681 AJ010841 AB463691	-185116	+	TSC_hg19_v1_chr10_+_131934675 AF118649 AK225609	-185156	+	TSC_hg19_v1_chr10_+_131934662 NM_001199868 NM_006541 BC005289 AK022131 AF118652	-185176	+	TSC_hg19_v1_chr10_-_133109808 BC093639 BC101535	989989	-	BC042951 NM_174937 TSC_hg19_v1_chr10_-_133110013	990170	-	CU692440 AB528671 U15174 BC009342 BC080643 TSC_hg19_v1_chr10_-_133795428 AK222626 AK295136 BC021989 AF002697 NM_004052	1675545	-	AJ010841|GLRX3|10539|glutaredoxin 3##AF118649|GLRX3|10539|glutaredoxin 3##AK225609|GLRX3|10539|glutaredoxin 3##NM_001199868|GLRX3|10539|glutaredoxin 3##NM_006541|GLRX3|10539|glutaredoxin 3##BC005289|GLRX3|10539|glutaredoxin 3##AK022131|GLRX3|10539|glutaredoxin 3##AF118652|GLRX3|10539|glutaredoxin 3##BC093639|TCERG1L|256536|transcription elongation regulator 1-like##BC101535|TCERG1L|256536|transcription elongation regulator 1-like##BC042951|TCERG1L|256536|transcription elongation regulator 1-like##NM_174937|TCERG1L|256536|transcription elongation regulator 1-like##U15174|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC009342|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC080643|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK222626|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK295136|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC021989|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AF002697|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_004052|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3	0.0	
chr1	207701879	207702018	reg1022413.p1	6.593	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	-32370	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-74287	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-206843	+	NM_175710 BC109190 BC109191	116539	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	223445	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	223535	+	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein	0.997827	CTCF.p2:0:0.998
chr2	74307118	74307299	reg1016658.p1	6.593	+	NM_144993	-33759	+	TSC_hg19_v1_chr2_+_74154019 X97386	-153162	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-153208	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	67810	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	68012	+	AL122062 TSC_hg19_v1_chr2_-_74382411	75173	-	NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.0	
chrX	11774652	11774770	reg1021534.p1	6.593	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	-90891	-	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	-463169	+	AF177663 NM_013423 AK297713	-490603	-	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	1632	+	NM_001193270 AK300814	2006	+	NM_006800 AK025642	3036	+	AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6##AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	0.525452	CTCF.p2:3:0.525
chr5	179223226	179223332	reg1022235.p1	6.592	+	NM_145867 BC029498 U11552 AK312033 TSC_hg19_v1_chr5_+_179221016 U09353 DQ890962 DQ894134 AB590307	-2247	+	TSC_hg19_v1_chr5_+_179159831 D83785 NM_014757 AB209135 BC047937	-63427	+	TSC_hg19_v1_chr5_+_179132740 BC050534 AB527263 CU678492 DQ890627 DQ893794 S67659	-90527	+	AK023137 NM_054013	6595	-	TSC_hg19_v1_chr5_+_179233392 NM_001142298 BC001874	10096	+	AB000624 AY358984 TSC_hg19_v1_chr5_-_179233688	10378	-	NM_145867|LTC4S|4056|leukotriene C4 synthase##BC029498|LTC4S|4056|leukotriene C4 synthase##U11552|LTC4S|4056|leukotriene C4 synthase##AK312033|LTC4S|4056|leukotriene C4 synthase##U09353|LTC4S|4056|leukotriene C4 synthase##DQ890962|LTC4S|4056|leukotriene C4 synthase##DQ894134|LTC4S|4056|leukotriene C4 synthase##D83785|MAML1|9794|mastermind-like 1 (Drosophila)##NM_014757|MAML1|9794|mastermind-like 1 (Drosophila)##AB209135|MAML1|9794|mastermind-like 1 (Drosophila)##BC047937|MAML1|9794|mastermind-like 1 (Drosophila)##BC050534|CANX|821|calnexin##DQ890627|CANX|821|calnexin##DQ893794|CANX|821|calnexin##AK023137|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B##NM_054013|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B##NM_001142298|SQSTM1|8878|sequestosome 1##BC001874|SQSTM1|8878|sequestosome 1##AB000624|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B##AY358984|MGAT4B|11282|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B	0.039426	
chr5	71708194	71708304	reg1019680.p1	6.592	+	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-92027	+	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	-92047	+	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	-92169	-	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	94934	-	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	404241	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	435692	+	BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1	0.026624	
chr9	5073802	5073963	reg1026535.p1	6.592	+	TSC_hg19_v1_chr9_+_4985271 AF005216 NM_004972 AF058925	-88623	+	TSC_hg19_v1_chr9_+_4985085 AK292525	-88795	+	TSC_hg19_v1_chr9_+_4839769 EF553527	-234114	+	AF135824 HQ258002 AF156094 NM_007179 BC126473 BC126475	111731	-	BC026254 AK291543 L34838 NM_002195 CU693182	157580	+	HQ258745 NM_005059 NM_134441 X00948 BC126415 BC126419	230712	-	AF005216|JAK2|3717|Janus kinase 2##NM_004972|JAK2|3717|Janus kinase 2##AF058925|JAK2|3717|Janus kinase 2##AK292525|JAK2|3717|Janus kinase 2##EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF135824|INSL6|11172|insulin-like 6##HQ258002|INSL6|11172|insulin-like 6##AF156094|INSL6|11172|insulin-like 6##NM_007179|INSL6|11172|insulin-like 6##BC126473|INSL6|11172|insulin-like 6##BC126475|INSL6|11172|insulin-like 6##BC026254|INSL4|3641|insulin-like 4 (placenta)##AK291543|INSL4|3641|insulin-like 4 (placenta)##L34838|INSL4|3641|insulin-like 4 (placenta)##NM_002195|INSL4|3641|insulin-like 4 (placenta)##HQ258745|RLN2|6019|relaxin 2##NM_005059|RLN2|6019|relaxin 2##NM_134441|RLN2|6019|relaxin 2##X00948|RLN2|6019|relaxin 2##BC126415|RLN2|6019|relaxin 2##BC126419|RLN2|6019|relaxin 2	0.0	
chr11	107988634	107988773	reg1023578.p1	6.591	+	X81882 BC017838 TSC_hg19_v1_chr11_+_107880062 CU687672 AF017061 AF327710	-108674	+	TSC_hg19_v1_chr11_+_107879644 AK292575 BC063306	-109076	+	NM_003478 AK125294	-109271	+	TSC_hg19_v1_chr11_+_107992293 D90228 NM_000019 AK312574 BC010942 BC063853 AB590491	3588	+	U58852 AB527441 TSC_hg19_v1_chr11_-_108093291 BC136270 AK291687 X97186	104580	-	D83243 BC050561 TSC_hg19_v1_chr11_-_108093366 BC040356 BC094769 AK290020 NM_002519	104669	-	X81882|CUL5|8065|cullin 5##BC017838|CUL5|8065|cullin 5##AF017061|CUL5|8065|cullin 5##AF327710|CUL5|8065|cullin 5##AK292575|CUL5|8065|cullin 5##BC063306|CUL5|8065|cullin 5##NM_003478|CUL5|8065|cullin 5##AK125294|CUL5|8065|cullin 5##D90228|ACAT1|38|acetyl-CoA acetyltransferase 1##NM_000019|ACAT1|38|acetyl-CoA acetyltransferase 1##AK312574|ACAT1|38|acetyl-CoA acetyltransferase 1##BC010942|ACAT1|38|acetyl-CoA acetyltransferase 1##BC063853|ACAT1|38|acetyl-CoA acetyltransferase 1##U58852|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC136270|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AK291687|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##X97186|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##D83243|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC050561|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC040356|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC094769|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AK290020|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##NM_002519|NPAT|4863|nuclear protein, ataxia-telangiectasia locus	0.997193	CTCF.p2:-13:0.997
chr14	107281335	107281435	reg1017798.p2	6.591	+	DQ205161 AY392971 AF085654 X58399 X58398 BC002792 TSC_hg19_v1_chr14_-_107259820	-21665	-	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	-62387	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	-70084	-	None	None	None	None	None	None	None	None	None	X58399|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##X58398|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##BC002792|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.992904	CTCF.p2:-18:0.993
chr15	85181542	85181643	reg1020156.p1	6.591	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	-37311	+	NM_001243531	-340351	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-858765	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	15880	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	15914	-	TSC_hg19_v1_chr15_-_85197515 AK225068 NM_032856 BC050648 BC063392	15934	-	AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73##AK225068|WDR73|84942|WD repeat domain 73##NM_032856|WDR73|84942|WD repeat domain 73##BC050648|WDR73|84942|WD repeat domain 73##BC063392|WDR73|84942|WD repeat domain 73	0.416651	CTCF.p2:6:0.417
chr22	21748534	21748669	reg1023552.p1	6.591	+	NM_001128635	-10562	+	NM_001128633	-10939	+	BC062565 AJ000730 BC008814 NM_004173 TSC_hg19_v1_chr22_-_21386851	-361750	-	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	23075	+	NM_001207052	72857	+	NM_001128635	156771	-	NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##BC062565|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AJ000730|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC008814|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_004173|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2##NM_001207052|TMEM191C|645426|transmembrane protein 191C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B	0.989232	CTCF.p2:22:0.989
chr4	122383960	122384088	reg1020412.p2	6.591	+	TSC_hg19_v1_chr4_-_122302115 NM_198179 AK309337	-81862	-	AK303192 NM_001244764	-235404	-	AK301058 NM_001128843	-246243	-	BC012804 BC012822 TSC_hg19_v1_chr4_-_122618109 BC004993 X12454 D00172 M21731	234088	-	TSC_hg19_v1_chr4_-_122618136 AK297909 M19384 BC018671 BC032093	234109	-	TSC_hg19_v1_chr4_-_122618148 J03745 AK312644 NM_001154	234132	-	NM_198179|QRFPR|84109|pyroglutamylated RFamide peptide receptor##AK309337|QRFPR|84109|pyroglutamylated RFamide peptide receptor##AK303192|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3##AK301058|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3##BC012804|ANXA5|308|annexin A5##BC012822|ANXA5|308|annexin A5##BC004993|ANXA5|308|annexin A5##X12454|ANXA5|308|annexin A5##D00172|ANXA5|308|annexin A5##M21731|ANXA5|308|annexin A5##AK297909|ANXA5|308|annexin A5##M19384|ANXA5|308|annexin A5##BC018671|ANXA5|308|annexin A5##BC032093|ANXA5|308|annexin A5##J03745|ANXA5|308|annexin A5##AK312644|ANXA5|308|annexin A5##NM_001154|ANXA5|308|annexin A5	0.775466	CTCF.p2:-5:0.775
chr4	596551	596702	reg1023287.p1	6.591	+	NM_133474	-103185	-	TSC_hg19_v1_chr4_+_493055 BC050262	-103529	+	TSC_hg19_v1_chr4_+_493041 AY358538 BC110878	-103583	+	NM_000283 NM_001145291 BC000249 S41458 DQ895767 EU176360 X66142 CU674100 BT009794	22762	+	NM_001145292 AK295285 AK309252 AK316054	50360	+	AK311638 TSC_hg19_v1_chr4_-_657444	60809	-	NM_133474|ZNF721|170960|zinc finger protein 721##BC050262|PIGG|54872|phosphatidylinositol glycan anchor biosynthesis, class G##AY358538|PIGG|54872|phosphatidylinositol glycan anchor biosynthesis, class G##BC110878|PIGG|54872|phosphatidylinositol glycan anchor biosynthesis, class G##NM_000283|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta##NM_001145291|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta##BC000249|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta##S41458|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta##DQ895767|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta##EU176360|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta##X66142|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta##BT009794|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta##NM_001145292|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta##AK295285|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta##AK309252|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta##AK316054|PDE6B|5158|phosphodiesterase 6B, cGMP-specific, rod, beta	0.034935	
chr11	15180788	15180885	reg1021125.p1	6.590	+	AB236158 NM_001042536	-44353	+	AB236159 NM_001031853	-46867	+	BC008428 AK291188 BC092468 NM_000728	-85710	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	1243565	-	BC037866 NM_001145811	1249591	-	AF309034 NM_033326	1317089	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	0.0827	
chr18	45135892	45135985	reg1021410.p1	6.590	+	TSC_hg19_v1_chr18_-_44702736 NM_016097	-433188	-	TSC_hg19_v1_chr18_-_44702734 AK027108	-433205	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	-433249	-	BC014840 NM_005901	320987	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	321277	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	321551	-	NM_016097|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2	0.0	
chr3	32775239	32775372	reg1019080.p1	6.590	+	TSC_hg19_v1_chr3_+_32726700 AK023227 AK022952 NM_015442 AK309670 BC006382 BC002931 BC002928 AK297085 AK298693 CU678296 CU678298 DQ892895 DQ896143 EU831494 EU831581	-48500	+	BX649189 TSC_hg19_v1_chr3_-_32612288 AK222573 AK222653 BC131620 AF078849 AK074348 AK293253 NM_016141	-163031	-	BC002797 TSC_hg19_v1_chr3_-_32544365 NM_017801	-230925	-	DQ232881 NM_001039111	84204	+	BC071751 NM_005508 AK292674	217795	+	TSC_hg19_v1_chr3_-_33138279 AK300021 AK126979 AK128242 NM_001039770 NM_001136238	362965	-	AK023227|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK022952|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##NM_015442|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK309670|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC006382|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002931|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002928|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK297085|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK298693|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ892895|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ896143|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831494|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831581|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC002797|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##NM_017801|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##DQ232881|TRIM71|131405|tripartite motif containing 71##NM_001039111|TRIM71|131405|tripartite motif containing 71##BC071751|CCR4|1233|chemokine (C-C motif) receptor 4##NM_005508|CCR4|1233|chemokine (C-C motif) receptor 4##AK292674|CCR4|1233|chemokine (C-C motif) receptor 4##AK300021|GLB1|2720|galactosidase, beta 1##AK126979|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##AK128242|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001039770|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001136238|TMPPE|643853|transmembrane protein with metallophosphoesterase domain	0.764551	CTCF.p2:5:0.765
chr3	38780263	38780388	reg1022359.p1	6.590	+	M77235 NM_000335 NM_001099404 NM_001099405 NM_198056 BC051374 NM_001160160 NM_001160161	-89185	-	TSC_hg19_v1_chr3_+_38537982 AK315814	-242345	+	BC015820 TSC_hg19_v1_chr3_+_38537851 BC065368 AK023235 AK289602	-242475	+	AF117907 NM_006514	55175	-	AF109737 AF150882 NM_014139	211726	-	TSC_hg19_v1_chr3_+_39093498 AB040882 AK025513 AK297349 AK298810 AK302307 BC026353 NM_020839 BC037168 AB385469 AF468833 AL832926	313176	+	M77235|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_000335|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099404|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099405|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_198056|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##BC051374|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160160|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160161|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##AK315814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC015820|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC065368|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK023235|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK289602|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AF117907|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##NM_006514|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AB040882|WDR48|57599|WD repeat domain 48##AK025513|WDR48|57599|WD repeat domain 48##AK297349|WDR48|57599|WD repeat domain 48##AK298810|WDR48|57599|WD repeat domain 48##AK302307|WDR48|57599|WD repeat domain 48##BC026353|WDR48|57599|WD repeat domain 48##NM_020839|WDR48|57599|WD repeat domain 48##BC037168|WDR48|57599|WD repeat domain 48##AF468833|WDR48|57599|WD repeat domain 48##AL832926|WDR48|57599|WD repeat domain 48	0.683115	CTCF.p2:5:0.683
chr12	74809581	74809682	reg1021797.p2	6.589	+	TSC_hg19_v1_chr12_-_72667288 BC040230	-2142361	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	-2143127	+	AK095156 TSC_hg19_v1_chr12_-_72666355	-2143288	-	NM_001136262 TSC_hg19_v1_chr12_+_74931614 AK056642	121954	+	TSC_hg19_v1_chr12_+_74931622 BC009111 AL713650	122008	+	AK054742 TSC_hg19_v1_chr12_+_74933681	123989	+	BC040230|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AK095156|LOC283392|283392|uncharacterized LOC283392##NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B##AK056642|ATXN7L3B|552889|ataxin 7-like 3B##BC009111|ATXN7L3B|552889|ataxin 7-like 3B##AL713650|ATXN7L3B|552889|ataxin 7-like 3B	0.129961	
chr13	75946736	75946834	reg1019141.p1	6.589	+	CR749622 TSC_hg19_v1_chr13_-_75901948	-44863	-	TSC_hg19_v1_chr13_-_74708425 AK291397	-1238389	-	AF161471 AF113122 NM_007249	-1238796	-	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	109553	-	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	165193	-	TSC_hg19_v1_chr13_+_76123890 AK313665 BC018125 NM_006002 M30496 CU676190 BT019359 CR456855	177139	+	CR749622|TBC1D4|9882|TBC1 domain family, member 4##AK291397|KLF12|11278|Kruppel-like factor 12##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6##AK313665|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BC018125|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_006002|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##M30496|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BT019359|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##CR456855|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)	0.069544	
chr15	66129189	66129321	reg1024177.p1	6.589	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-44662	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	-44782	-	AF062922 NM_004727	-214986	+	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	32592	+	TSC_hg19_v1_chr15_-_66321664 AK054827	192438	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	416822	-	AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11	0.107504	
chr2	158159331	158159455	reg1001755.p2	6.589	+	BC142676 BC142703 AY277591 NM_014568 AK292154 BC144211	-45100	+	TSC_hg19_v1_chr2_+_157292921 U12424 BC019874	-866439	+	TSC_hg19_v1_chr2_+_157292894 NM_000408 AK292817	-866527	+	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	22891	-	NM_001009959 AK296477	24763	-	L06633 AB528875 CU690346 AF068836 BC036449 TSC_hg19_v1_chr2_-_158300602 AK312753 NM_004288	141171	-	BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##U12424|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC019874|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_000408|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK292817|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein##L06633|CYTIP|9595|cytohesin 1 interacting protein##AF068836|CYTIP|9595|cytohesin 1 interacting protein##BC036449|CYTIP|9595|cytohesin 1 interacting protein##AK312753|CYTIP|9595|cytohesin 1 interacting protein##NM_004288|CYTIP|9595|cytohesin 1 interacting protein	0.036179	
chr6_ssto_hap7	3068521	3068588	reg1020891.p1	6.589	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.994584	CTCF.p2:-7:0.995
chr9	136009217	136009397	reg1021874.p1	6.589	+	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	-12808	-	NM_001807 S79774 M85201 BC042510 AK299965	-71932	+	TSC_hg19_v1_chr9_+_135906386 AK000194 AK097295 AK293980 BC006409 AY007123 DQ892071 DQ895265 AJ420443 BC030157	-102919	+	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	15379	-	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	29990	-	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	75313	-	AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B	0.0	
chr12	113646421	113646602	reg1021225.p2	6.588	+	AK075358 AK123762 AK027741 TSC_hg19_v1_chr12_+_113623525 AY007158 AK027733 NM_032848 AK222908	-23038	+	BC005848 BC001132 BC001848 AY148094 TSC_hg19_v1_chr12_-_113623279 AF478457 NM_001111322 NM_024072	-23264	-	AK308987 NM_001144872	-58907	+	TSC_hg19_v1_chr12_-_113658844 BC013151 NM_138451 AK127152	12351	-	TSC_hg19_v1_chr12_+_113659268 AK093490 AX748162 NM_001143819 NM_017901 AY083666	12732	+	AB032995 BC152423 TSC_hg19_v1_chr12_+_113659278 BC136795 BC136796	12769	+	AK075358|C12orf52|84934|chromosome 12 open reading frame 52##AK123762|C12orf52|84934|chromosome 12 open reading frame 52##AK027741|C12orf52|84934|chromosome 12 open reading frame 52##AY007158|C12orf52|84934|chromosome 12 open reading frame 52##AK027733|C12orf52|84934|chromosome 12 open reading frame 52##NM_032848|C12orf52|84934|chromosome 12 open reading frame 52##AK222908|C12orf52|84934|chromosome 12 open reading frame 52##BC005848|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##BC001132|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##BC001848|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AY148094|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AF478457|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_001111322|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_024072|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_001144872|CCDC42B|387885|coiled-coil domain containing 42B##BC013151|IQCD|115811|IQ motif containing D##NM_138451|IQCD|115811|IQ motif containing D##AK127152|IQCD|115811|IQ motif containing D##AK093490|TPCN1|53373|two pore segment channel 1##NM_001143819|TPCN1|53373|two pore segment channel 1##NM_017901|TPCN1|53373|two pore segment channel 1##AY083666|TPCN1|53373|two pore segment channel 1##AB032995|TPCN1|53373|two pore segment channel 1##BC152423|TPCN1|53373|two pore segment channel 1##BC136795|TPCN1|53373|two pore segment channel 1##BC136796|TPCN1|53373|two pore segment channel 1	0.0	
chr15	34030046	34030188	reg1019452.p2	6.588	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	-426948	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-669882	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-1018951	-	TSC_hg19_v1_chr15_-_34212524 BC037796	182441	-	AK095198 NM_012125	230971	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	301195	-	AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor	0.998686	CTCF.p2:-28:0.999
chr2	239422131	239422268	reg1022293.p1	6.588	+	TSC_hg19_v1_chr2_+_239335693 AF156777	-86510	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	-86593	+	TSC_hg19_v1_chr2_+_239229215 AB590948 CU691344 AF230877	-192941	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	334564	+	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	900449	-	TSC_hg19_v1_chr2_-_240322695 BC039904	900499	-	AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AF230877|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4	0.273895	CTCF.p2:-5:0.274
chr7	129465687	129465775	reg1016889.p3	6.588	+	L22454 NM_001040110	-195814	+	AK293351 TSC_hg19_v1_chr7_+_129251621 BC016925 AK290891	-214119	+	TSC_hg19_v1_chr7_+_129251531 NM_005011	-214190	+	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	127020	-	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	127078	-	TSC_hg19_v1_chr7_-_129691215 BC000190 AB463378 AJ537494 AM393415 CU679956 BC011551 AF151050 AK001317 AK022373 NM_016478	225490	-	L22454|NRF1|4899|nuclear respiratory factor 1##NM_001040110|NRF1|4899|nuclear respiratory factor 1##AK293351|NRF1|4899|nuclear respiratory factor 1##BC016925|NRF1|4899|nuclear respiratory factor 1##AK290891|NRF1|4899|nuclear respiratory factor 1##NM_005011|NRF1|4899|nuclear respiratory factor 1##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC000190|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AJ537494|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AM393415|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC011551|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AF151050|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK001317|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK022373|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_016478|ZC3HC1|51530|zinc finger, C3HC-type containing 1	0.989975	CTCF.p2:30:0.990
chr14	21945232	21945369	reg1021867.p1	6.587	+	CU676744 DQ893243 DQ896572 AK027730 TSC_hg19_v1_chr14_-_21945094 AK296057 BX647601 BC066366 AK315354 AK307349 BC020839 AF468652 NM_032846	-211	-	TSC_hg19_v1_chr14_-_21944834 NM_001163380	-446	-	AF091029 TSC_hg19_v1_chr14_-_21944789 AK300599	-512	-	TSC_hg19_v1_chr14_+_21945341 NM_014828 BC035050	42	+	TSC_hg19_v1_chr14_+_21945364 AK295913	61	+	TSC_hg19_v1_chr14_+_21945382 AK299807 AK298555 BC020727 BC013689 BC020292 AB018280	105	+	DQ893243|RAB2B|84932|RAB2B, member RAS oncogene family##DQ896572|RAB2B|84932|RAB2B, member RAS oncogene family##AK027730|RAB2B|84932|RAB2B, member RAS oncogene family##AK296057|RAB2B|84932|RAB2B, member RAS oncogene family##BX647601|RAB2B|84932|RAB2B, member RAS oncogene family##BC066366|RAB2B|84932|RAB2B, member RAS oncogene family##AK315354|RAB2B|84932|RAB2B, member RAS oncogene family##AK307349|RAB2B|84932|RAB2B, member RAS oncogene family##BC020839|RAB2B|84932|RAB2B, member RAS oncogene family##AF468652|RAB2B|84932|RAB2B, member RAS oncogene family##NM_032846|RAB2B|84932|RAB2B, member RAS oncogene family##NM_001163380|RAB2B|84932|RAB2B, member RAS oncogene family##AF091029|RAB2B|84932|RAB2B, member RAS oncogene family##AK300599|RAB2B|84932|RAB2B, member RAS oncogene family##NM_014828|TOX4|9878|TOX high mobility group box family member 4##BC035050|TOX4|9878|TOX high mobility group box family member 4##AK295913|TOX4|9878|TOX high mobility group box family member 4##AK299807|TOX4|9878|TOX high mobility group box family member 4##AK298555|TOX4|9878|TOX high mobility group box family member 4##BC020727|TOX4|9878|TOX high mobility group box family member 4##BC013689|TOX4|9878|TOX high mobility group box family member 4##BC020292|TOX4|9878|TOX high mobility group box family member 4##AB018280|TOX4|9878|TOX high mobility group box family member 4	0.647704	CTCF.p2:-20:0.648
chr4	176813162	176813301	reg1023589.p1	6.587	+	BC032904 NM_201591	-79050	-	BC044612 BC053954 TSC_hg19_v1_chr4_-_176733905	-79325	-	BC010461 BC022508 TSC_hg19_v1_chr4_-_176733419 D49958	-79790	-	BC022528 TSC_hg19_v1_chr4_-_176923504	110263	-	AK226176 TSC_hg19_v1_chr4_-_176923545	110309	-	TSC_hg19_v1_chr4_-_176923575 NM_005277 NM_201592	110378	-	BC032904|GPM6A|2823|glycoprotein M6A##NM_201591|GPM6A|2823|glycoprotein M6A##BC044612|GPM6A|2823|glycoprotein M6A##BC053954|GPM6A|2823|glycoprotein M6A##BC010461|GPM6A|2823|glycoprotein M6A##BC022508|GPM6A|2823|glycoprotein M6A##D49958|GPM6A|2823|glycoprotein M6A##BC022528|GPM6A|2823|glycoprotein M6A##AK226176|GPM6A|2823|glycoprotein M6A##NM_005277|GPM6A|2823|glycoprotein M6A##NM_201592|GPM6A|2823|glycoprotein M6A	0.33744	CTCF.p2:19:0.337
chr1	31654406	31654534	reg1019716.p1	6.586	+	BX647437 TSC_hg19_v1_chr1_-_31538801	-115687	-	TSC_hg19_v1_chr1_-_31538565 GQ334687 GQ334688 NM_001020658 NM_014676 AK294477	-115878	-	TSC_hg19_v1_chr1_-_31538543 BC013398 D43951 AK291779 AK300457 AF315592 AK096476 AK222605	-115953	-	AK299507 TSC_hg19_v1_chr1_-_31712475	57970	-	NM_024522 TSC_hg19_v1_chr1_-_31712735	58265	-	DQ893627 DQ895442 TSC_hg19_v1_chr1_-_31769633 AK313800 AF090988 AK074516 EF011621 BC001494 NM_004814 AK298823	115160	-	BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)##NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)##NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)##AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)##BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)##D43951|PUM1|9698|pumilio homolog 1 (Drosophila)##AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)##AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)##AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)##AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)##AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)##AK299507|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1##NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1##DQ893627|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##DQ895442|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK313800|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AF090988|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK074516|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##EF011621|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##BC001494|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##NM_004814|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK298823|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)	0.118021	
chr3	75241340	75241452	reg1020576.p1	6.586	+	AB384611 BC150608 NM_020872	-671094	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1567358	-	BC051316 BC064501 NM_018029	-2130587	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	242753	-	AK000525 NM_001124759	472087	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	480090	+	BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074	0.991714	CTCF.p2:1:0.992
chr7	128434241	128434349	reg1021890.p1	6.586	+	NM_022742 BC150331 AB058696 BC152408	-2222	+	TSC_hg19_v1_chr7_+_128431491 NM_001201372 AK124447	-2773	+	DQ822478 NM_001708	-18452	-	AB371585 AF146692 NM_001127487 NM_001458	36177	+	NM_001198909 NM_004231 BC107854 TSC_hg19_v1_chr7_+_128502909 BC104230 BC104231 D49400 AK312214	68595	+	TSC_hg19_v1_chr7_+_128502927 CR456896	68647	+	NM_022742|CCDC136|64753|coiled-coil domain containing 136##BC150331|CCDC136|64753|coiled-coil domain containing 136##AB058696|CCDC136|64753|coiled-coil domain containing 136##BC152408|CCDC136|64753|coiled-coil domain containing 136##NM_001201372|CCDC136|64753|coiled-coil domain containing 136##AK124447|CCDC136|64753|coiled-coil domain containing 136##DQ822478|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive##NM_001708|OPN1SW|611|opsin 1 (cone pigments), short-wave-sensitive##AB371585|FLNC|2318|filamin C, gamma##AF146692|FLNC|2318|filamin C, gamma##NM_001127487|FLNC|2318|filamin C, gamma##NM_001458|FLNC|2318|filamin C, gamma##NM_001198909|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##NM_004231|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC107854|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC104230|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC104231|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##D49400|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##AK312214|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##CR456896|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F	0.997096	CTCF.p2:-3:0.997
chr11	27226234	27226350	reg1023430.p1	6.585	+	NM_003986	-163784	+	TSC_hg19_v1_chr11_+_27015837 BC026873	-210448	+	TSC_hg19_v1_chr11_+_27015673 AK310616	-210622	+	AF382034 TSC_hg19_v1_chr11_-_27384763 AY598334 CU678989 AK313358 BC008496 AK308494 NM_030771 NM_080654	158474	-	TSC_hg19_v1_chr11_-_27494323 AB209743 AF257182 BC033039 NM_018490	268012	-	AB385247 BC053907 TSC_hg19_v1_chr11_-_27528315 BC009774 AK223156 AL833601 AK002077 NM_018362	302020	-	NM_003986|BBOX1|8424|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1##BC026873|FIBIN|387758|fin bud initiation factor homolog (zebrafish)##AF382034|CCDC34|91057|coiled-coil domain containing 34##AY598334|CCDC34|91057|coiled-coil domain containing 34##AK313358|CCDC34|91057|coiled-coil domain containing 34##BC008496|CCDC34|91057|coiled-coil domain containing 34##AK308494|CCDC34|91057|coiled-coil domain containing 34##NM_030771|CCDC34|91057|coiled-coil domain containing 34##NM_080654|CCDC34|91057|coiled-coil domain containing 34##AB209743|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF257182|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC033039|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##NM_018490|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)##BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)##AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)##AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)##AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)##NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)	0.979587	CTCF.p2:2:0.980
chr16	27121085	27121184	reg1021379.p1	6.585	+	NM_001145545 BC031257 AK311574	-42887	+	AF105378 NM_006040	-1417788	+	TSC_hg19_v1_chr16_-_25269141 AK303472	-1851929	-	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	93693	+	AK297166 NM_001145348	94161	+	TSC_hg19_v1_chr16_-_27280055 AK315674	158918	-	NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5##AK315674|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)	0.90584	CTCF.p2:20:0.906
chrX	120456153	120456323	reg1022438.p2	6.585	+	TSC_hg19_v1_chrX_+_120181464 BC050732 NM_012084 AK313356	-274798	+	BC029540 NM_001080141 NM_001080146	-336601	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080141 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	-341461	-	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	1862002	+	TSC_hg19_v1_chrX_-_122866885 AK001758	2410645	-	TSC_hg19_v1_chrX_-_122866897 NM_001081550	2410659	-	BC050732|GLUD2|2747|glutamate dehydrogenase 2##NM_012084|GLUD2|2747|glutamate dehydrogenase 2##AK313356|GLUD2|2747|glutamate dehydrogenase 2##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##AK001758|THOC2|57187|THO complex 2##NM_001081550|THOC2|57187|THO complex 2	0.061097	
chrX	19906717	19906845	reg1020598.p2	6.585	+	TSC_hg19_v1_chrX_-_19905675 AK313308 AF230904 AY423734 NM_031892	-1077	-	TSC_hg19_v1_chrX_-_19905646 BC050663 BC015806	-1149	-	TSC_hg19_v1_chrX_-_19905450 AY542305	-1318	-	NM_198279	81600	-	AY092822 TSC_hg19_v1_chrX_-_20009180	102327	-	AK294788 NM_001168467	227971	-	AK313308|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF230904|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY423734|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_031892|SH3KBP1|30011|SH3-domain kinase binding protein 1##BC050663|SH3KBP1|30011|SH3-domain kinase binding protein 1##BC015806|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY542305|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_198279|CXorf23|256643|chromosome X open reading frame 23##AY092822|LOC729609|729609|uncharacterized LOC729609##AK294788|MAP7D2|256714|MAP7 domain containing 2##NM_001168467|MAP7D2|256714|MAP7 domain containing 2	0.980387	CTCF.p2:13:0.980
chr10	75973467	75973572	reg1020497.p1	6.584	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-36932	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-36989	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-37037	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	612835	+	AY686755 NM_001003892 BC137321 BC137322	844786	-	AB027004 AB103375 NM_016364	885728	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.335255	CTCF.p2:3:0.335
chr12	117037629	117037729	reg1019758.p1	6.584	+	NM_001085481	-40494	+	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	-66450	+	TSC_hg19_v1_chr12_-_116715263 AY338463	-322519	-	TSC_hg19_v1_chr12_-_117175822 AK309652 BC019843 AK025068 NM_024738	138059	-	TSC_hg19_v1_chr12_-_117175868 AK222983 AK298857	138190	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	138440	+	NM_001085481|MAP1LC3B2|643246|microtubule-associated protein 1 light chain 3 beta 2##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173##AY338463|MED13L|23389|mediator complex subunit 13-like##AK309652|C12orf49|79794|chromosome 12 open reading frame 49##BC019843|C12orf49|79794|chromosome 12 open reading frame 49##AK025068|C12orf49|79794|chromosome 12 open reading frame 49##NM_024738|C12orf49|79794|chromosome 12 open reading frame 49##AK222983|C12orf49|79794|chromosome 12 open reading frame 49##AK298857|C12orf49|79794|chromosome 12 open reading frame 49##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2	0.916659	CTCF.p2:-45:0.917
chr5	122232812	122232957	reg1025298.p1	6.584	+	NM_014035 BC010886 BC069012 TSC_hg19_v1_chr5_+_122181284 AF139461 AY358098 CU679837 CU686699 AY044655	-51637	+	TSC_hg19_v1_chr5_+_122110786 AY272044 AK002170 AB464236 BT009841 DQ890933 DQ894096 AF043453	-122072	+	AK023581 TSC_hg19_v1_chr5_+_122110776 BC003382 AF065482 AK222968	-122115	+	CU678110 TSC_hg19_v1_chr5_-_122372375 AK290321 BC002678	139480	-	TSC_hg19_v1_chr5_-_122372418 AK304053 NM_000943	139540	-	NM_001136239 AK297992 AF272898 AF272899	191960	+	NM_014035|SNX24|28966|sorting nexin 24##BC010886|SNX24|28966|sorting nexin 24##BC069012|SNX24|28966|sorting nexin 24##AF139461|SNX24|28966|sorting nexin 24##AY358098|SNX24|28966|sorting nexin 24##AY044655|SNX24|28966|sorting nexin 24##AY272044|SNX2|6643|sorting nexin 2##AK002170|SNX2|6643|sorting nexin 2##BT009841|SNX2|6643|sorting nexin 2##DQ890933|SNX2|6643|sorting nexin 2##DQ894096|SNX2|6643|sorting nexin 2##AF043453|SNX2|6643|sorting nexin 2##AK023581|SNX2|6643|sorting nexin 2##BC003382|SNX2|6643|sorting nexin 2##AF065482|SNX2|6643|sorting nexin 2##AK222968|SNX2|6643|sorting nexin 2##AK290321|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##BC002678|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##AK304053|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##NM_000943|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6	0.915305	CTCF.p2:-1:0.915
chr6	130603514	130603628	reg1021715.p1	6.584	+	AK091882 AX747235 NM_001017373	-59473	-	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	-67116	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	-263846	+	AB052099 NM_052913	154690	+	BC113027 NM_001195597 AK091900 AX747243 BC101422 BC101423 BC101424 BC101425 BC113026 TSC_hg19_v1_chr6_+_131148577	544991	+	TSC_hg19_v1_chr6_-_131291480 AK307764 NM_001199389	687980	-	AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A##BC113027|LOC100507203|100507203|uncharacterized LOC100507203##NM_001195597|LOC100507203|100507203|uncharacterized LOC100507203##AK091900|LOC100507203|100507203|uncharacterized LOC100507203##BC101422|LOC100507203|100507203|uncharacterized LOC100507203##BC101423|LOC100507203|100507203|uncharacterized LOC100507203##BC101424|LOC100507203|100507203|uncharacterized LOC100507203##BC101425|LOC100507203|100507203|uncharacterized LOC100507203##BC113026|LOC100507203|100507203|uncharacterized LOC100507203##AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	0.106463	
chrX	56791281	56791415	reg1008883.p4	6.584	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-35657	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-201297	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-532438	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	230623	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	356580	-	BC071694 NM_019003	372709	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.776009	CTCF.p2:28:0.776
chr13	37389330	37389460	reg1020103.p1	6.582	+	BC036540 NM_203451 AK294236	-141293	+	TSC_hg19_v1_chr13_+_37006631 AK225146 U66838 BC035479 BC036346 AB462995 AM393372 BT019577 DQ891303 DQ894488	-382702	+	AK314261 NM_001111045 NM_003914	-382987	+	TSC_hg19_v1_chr13_+_37393356 NM_000538 AK313912 BC026088 DQ891169 DQ893581 DQ894352	4004	+	TSC_hg19_v1_chr13_-_37494376 BC067766 NM_001127217 NM_005905	104994	-	CU680348 TSC_hg19_v1_chr13_-_37573465 AF161498 BC012531 AF183413 AK299126	184058	-	BC036540|SERTM1|400120|serine-rich and transmembrane domain containing 1##NM_203451|SERTM1|400120|serine-rich and transmembrane domain containing 1##AK294236|SERTM1|400120|serine-rich and transmembrane domain containing 1##AK225146|CCNA1|8900|cyclin A1##U66838|CCNA1|8900|cyclin A1##BC035479|CCNA1|8900|cyclin A1##BC036346|CCNA1|8900|cyclin A1##AM393372|CCNA1|8900|cyclin A1##BT019577|CCNA1|8900|cyclin A1##DQ891303|CCNA1|8900|cyclin A1##DQ894488|CCNA1|8900|cyclin A1##AK314261|CCNA1|8900|cyclin A1##NM_001111045|CCNA1|8900|cyclin A1##NM_003914|CCNA1|8900|cyclin A1##NM_000538|RFXAP|5994|regulatory factor X-associated protein##AK313912|RFXAP|5994|regulatory factor X-associated protein##BC026088|RFXAP|5994|regulatory factor X-associated protein##DQ891169|RFXAP|5994|regulatory factor X-associated protein##DQ893581|RFXAP|5994|regulatory factor X-associated protein##DQ894352|RFXAP|5994|regulatory factor X-associated protein##BC067766|SMAD9|4093|SMAD family member 9##NM_001127217|SMAD9|4093|SMAD family member 9##NM_005905|SMAD9|4093|SMAD family member 9##AF161498|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##BC012531|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##AF183413|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##AK299126|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)	0.012252	
chr15	52500683	52500792	reg1020017.p2	6.582	+	NM_016194	-17173	-	TSC_hg19_v1_chr15_+_52472257 AF007131	-28402	+	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	-28596	-	AF161352 TSC_hg19_v1_chr15_-_52529707	28969	-	AF272390 BC144611 BC064841 TSC_hg19_v1_chr15_-_52587968 AK301079 AK304136 NM_018728	87197	-	TSC_hg19_v1_chr15_-_52821078 AB290180 AK303660 AK307600 NM_000259 NM_001142495 U90942 Y07759	320519	-	NM_016194|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF161352|MYO5C|55930|myosin VC##AF272390|MYO5C|55930|myosin VC##BC144611|MYO5C|55930|myosin VC##BC064841|MYO5C|55930|myosin VC##AK301079|MYO5C|55930|myosin VC##AK304136|MYO5C|55930|myosin VC##NM_018728|MYO5C|55930|myosin VC##AB290180|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK303660|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK307600|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_000259|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_001142495|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##U90942|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##Y07759|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	0.028789	
chr16	17352791	17352914	reg1018715.p1	6.582	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-1026322	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1026364	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-1026370	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	211953	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1220539	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1445244	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.669497	CTCF.p2:-1:0.669
chr20	24141360	24141463	reg1021869.p1	6.582	+	BC040904 NM_178311	-171996	-	L20492 L20491 NM_178312	-173940	-	AB590893 CU686872 HQ447459 BC069514 X70377 BC062678 NM_001900	-281065	-	AK024282 NM_024893	308423	+	TSC_hg19_v1_chr20_+_24450295 BC030637	308891	+	TSC_hg19_v1_chr20_+_24929865 NM_003650	788452	+	BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20492|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20491|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178312|GGTLC1|92086|gamma-glutamyltransferase light chain 1##HQ447459|CST5|1473|cystatin D##BC069514|CST5|1473|cystatin D##X70377|CST5|1473|cystatin D##BC062678|CST5|1473|cystatin D##NM_001900|CST5|1473|cystatin D##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1##BC030637|SYNDIG1|79953|synapse differentiation inducing 1##NM_003650|CST7|8530|cystatin F (leukocystatin)	0.20629	CTCF.p2:-9:0.206
chr2	44787652	44787763	reg1019806.p1	6.582	+	NM_024766 TSC_hg19_v1_chr2_+_44589085 BC029359 AK027104 BC053733	-198615	+	AK131463 NM_001171603 NM_001171617	-198736	-	AB007896 TSC_hg19_v1_chr2_-_44588634 BC151236 AK025649 NM_001171606 NM_001171613	-199027	-	AJ012611 NM_005413 AL162671	381339	+	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	448843	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	1007421	-	NM_024766|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC029359|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK027104|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC053733|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK131463|PREPL|9581|prolyl endopeptidase-like##NM_001171603|PREPL|9581|prolyl endopeptidase-like##NM_001171617|PREPL|9581|prolyl endopeptidase-like##AB007896|PREPL|9581|prolyl endopeptidase-like##BC151236|PREPL|9581|prolyl endopeptidase-like##AK025649|PREPL|9581|prolyl endopeptidase-like##NM_001171606|PREPL|9581|prolyl endopeptidase-like##NM_001171613|PREPL|9581|prolyl endopeptidase-like##AJ012611|SIX3|6496|SIX homeobox 3##NM_005413|SIX3|6496|SIX homeobox 3##AL162671|SIX3|6496|SIX homeobox 3##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1	0.984024	CTCF.p2:3:0.984
chr7	17341244	17341356	reg1021465.p1	6.582	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	-3031	+	AY359065 BC058284 NM_176813	-419696	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-496629	-	TSC_hg19_v1_chr7_+_17382906 BC021696	41606	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	638749	-	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	638827	-	AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13##AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13	0.355879	CTCF.p2:3:0.356
chr8	104883691	104883813	reg1019156.p1	6.582	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	-52177	+	AK126939 NM_001100117	-370777	+	TSC_hg19_v1_chr8_+_104427659 AK001874	-456087	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	468300	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	595463	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	717423	-	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK001874|DCAF13|25879|DDB1 and CUL4 associated factor 13##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12	0.999769	CTCF.p2:-20:1.000
chr9	113214628	113214786	reg1018773.p1	6.582	+	HQ258720 AF305830 BC130549 BC130551 BC144461 BC035743 NM_001003936	-114607	-	TSC_hg19_v1_chr9_-_113018882 NM_001244938 NM_003329	-195808	-	TSC_hg19_v1_chr9_-_113018817 BX647247 D28376 AK289508	-195882	-	TSC_hg19_v1_chr9_-_113342011 AJ619977 AY243503 AK122605 BC030816 NM_153366	127357	-	NM_001166280 NM_001166281 NM_005592 AF006464 BC109098 BC109099 EU832778 EU832779 GQ129313	216409	+	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	585705	-	HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001244938|TXN|7295|thioredoxin##NM_003329|TXN|7295|thioredoxin##BX647247|TXN|7295|thioredoxin##D28376|TXN|7295|thioredoxin##AK289508|TXN|7295|thioredoxin##AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1	0.852219	CTCF.p2:-34:0.852
chr2	102622829	102622916	reg1020688.p1	6.581	+	BC027733 BC012346 NM_173343	-7415	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	-14509	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	-114340	+	TSC_hg19_v1_chr2_+_102759205 X16896	136360	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	147548	+	AF284434 NM_003854 U49065 BC107064	180576	+	BC027733|IL1R2|7850|interleukin 1 receptor, type II##BC012346|IL1R2|7850|interleukin 1 receptor, type II##NM_173343|IL1R2|7850|interleukin 1 receptor, type II##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##X16896|IL1R1|3554|interleukin 1 receptor, type I##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2	0.960555	CTCF.p2:16:0.961
chr4	38070898	38071072	reg1021844.p1	6.581	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-91968	+	AF095288 BC069114 BC069400 NM_006607	-108930	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-178196	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	594841	+	AF289565 TSC_hg19_v1_chr4_-_38666549	595504	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	713614	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.01569	
chr7	35229959	35230114	reg1022557.p1	6.581	+	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	-4244	-	DQ287932 NM_015283	-152384	-	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	-532117	+	TSC_hg19_v1_chr7_-_35293701 NM_001077653 NM_001166220 DQ986374	63694	-	TSC_hg19_v1_chr7_-_35734533 BC005091	504560	-	BC020264 TSC_hg19_v1_chr7_-_35734751 AK055708	504703	-	BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##NM_001077653|TBX20|57057|T-box 20##NM_001166220|TBX20|57057|T-box 20##DQ986374|TBX20|57057|T-box 20##BC005091|HERPUD2|64224|HERPUD family member 2##BC020264|HERPUD2|64224|HERPUD family member 2##AK055708|HERPUD2|64224|HERPUD family member 2	0.998077	CTCF.p2:-1:0.998
chr15	71867951	71868082	reg1020827.p1	6.580	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	-28436	+	NM_024817 BC140868	-434206	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-460145	-	AF121129 NM_014249 NM_016346 AF148128	234896	+	AK097557 NM_001166340	538582	+	NM_001172109 NM_001172110	541202	+	AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172109|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172110|SENP8|123228|SUMO/sentrin specific peptidase family member 8	0.0	
chr3	22929284	22929428	reg1020305.p1	6.580	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-515222	-	AK026072 NM_024697	-1136541	-	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-2701682	-	TSC_hg19_v1_chr3_+_23244600 AK307075	315227	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	315399	+	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	918054	+	AK310298|ZNF385D|79750|zinc finger protein 385D##AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.042044	
chr4	146075866	146075963	reg1020049.p1	6.580	+	TSC_hg19_v1_chr4_+_146031528 X74987	-44364	+	TSC_hg19_v1_chr4_+_146019486 X76388 BC016283	-56418	+	TSC_hg19_v1_chr4_+_146019465 AK315198 AB062293	-56488	+	BC118572 BC118653 NM_017493	19979	-	AK302581 NM_001102653	24898	-	TSC_hg19_v1_chr4_+_146403004 U59423 NM_005900 BC001878	326968	+	X74987|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##X76388|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##BC016283|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##AK315198|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##AB062293|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##BC118572|OTUD4|54726|OTU domain containing 4##BC118653|OTUD4|54726|OTU domain containing 4##NM_017493|OTUD4|54726|OTU domain containing 4##AK302581|OTUD4|54726|OTU domain containing 4##NM_001102653|OTUD4|54726|OTU domain containing 4##U59423|SMAD1|4086|SMAD family member 1##NM_005900|SMAD1|4086|SMAD family member 1##BC001878|SMAD1|4086|SMAD family member 1	0.908229	CTCF.p2:6:0.908
chrX	117593601	117593733	reg1019841.p1	6.579	+	TSC_hg19_v1_chrX_+_117526665 AL834210	-66980	+	TSC_hg19_v1_chrX_+_117480490 AM393332 AM393787 EU831942 EU832037 AK304432	-113205	+	TSC_hg19_v1_chrX_+_117480068 NM_001184965 NM_001184966 NM_019045 AK127556 BX537578 AL833605 BX538087 AK299711 BC028697 BX648150	-113502	+	AY692226 NM_144658 TSC_hg19_v1_chrX_+_117629874	36205	+	TSC_hg19_v1_chrX_+_117861562 BC015768 NM_001560 Y10659 U81379 U81380 AK313467 Y09328 BC009960 AB528371 DQ893454 DQ896296 AB209849	267900	+	TSC_hg19_v1_chrX_+_117957786 AK122676 BC036572 BC031241 BC057841 NM_173798 BC018066	364155	+	AL834210|WDR44|54521|WD repeat domain 44##AM393332|WDR44|54521|WD repeat domain 44##AM393787|WDR44|54521|WD repeat domain 44##EU831942|WDR44|54521|WD repeat domain 44##EU832037|WDR44|54521|WD repeat domain 44##AK304432|WDR44|54521|WD repeat domain 44##NM_001184965|WDR44|54521|WD repeat domain 44##NM_001184966|WDR44|54521|WD repeat domain 44##NM_019045|WDR44|54521|WD repeat domain 44##AK127556|WDR44|54521|WD repeat domain 44##BX537578|WDR44|54521|WD repeat domain 44##AL833605|WDR44|54521|WD repeat domain 44##BX538087|WDR44|54521|WD repeat domain 44##AK299711|WDR44|54521|WD repeat domain 44##BC028697|WDR44|54521|WD repeat domain 44##BX648150|WDR44|54521|WD repeat domain 44##AY692226|DOCK11|139818|dedicator of cytokinesis 11##NM_144658|DOCK11|139818|dedicator of cytokinesis 11##BC015768|IL13RA1|3597|interleukin 13 receptor, alpha 1##NM_001560|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y10659|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81379|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81380|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK313467|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y09328|IL13RA1|3597|interleukin 13 receptor, alpha 1##BC009960|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ893454|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ896296|IL13RA1|3597|interleukin 13 receptor, alpha 1##AB209849|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK122676|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC036572|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC031241|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC057841|ZCCHC12|170261|zinc finger, CCHC domain containing 12##NM_173798|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC018066|ZCCHC12|170261|zinc finger, CCHC domain containing 12	0.963545	CTCF.p2:-8:0.964
chr2	233470661	233470785	reg1011045.p1	6.578	+	TSC_hg19_v1_chr2_+_233415410 NM_004846 BC005874 AB209519 AK022518 AK303802 BC005392 BC021690 AF038957 AF047695 BC000360 AF068117 BC021226 CU676880	-55278	+	TSC_hg19_v1_chr2_-_233415301 BC035143	-55404	-	TSC_hg19_v1_chr2_-_233415265 AK056329 NM_145702 BC063500	-55488	-	AK310565 NM_001243252	43	+	TSC_hg19_v1_chr2_+_233497966 AK293581	27247	+	NM_025202 TSC_hg19_v1_chr2_+_233498314 AK315442 BC035476 AK023674 BC002449 AB209715 BC004128 AF218006 BC071886 AB385018	27585	+	NM_004846|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC005874|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AB209519|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AK022518|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AK303802|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC005392|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC021690|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AF038957|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AF047695|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC000360|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AF068117|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC021226|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC035143|TIGD1|200765|tigger transposable element derived 1##AK056329|TIGD1|200765|tigger transposable element derived 1##NM_145702|TIGD1|200765|tigger transposable element derived 1##BC063500|TIGD1|200765|tigger transposable element derived 1##AK310565|EFHD1|80303|EF-hand domain family, member D1##NM_001243252|EFHD1|80303|EF-hand domain family, member D1##AK293581|EFHD1|80303|EF-hand domain family, member D1##NM_025202|EFHD1|80303|EF-hand domain family, member D1##AK315442|EFHD1|80303|EF-hand domain family, member D1##BC035476|EFHD1|80303|EF-hand domain family, member D1##AK023674|EFHD1|80303|EF-hand domain family, member D1##BC002449|EFHD1|80303|EF-hand domain family, member D1##AB209715|EFHD1|80303|EF-hand domain family, member D1##BC004128|EFHD1|80303|EF-hand domain family, member D1##AF218006|EFHD1|80303|EF-hand domain family, member D1##BC071886|EFHD1|80303|EF-hand domain family, member D1	0.992615	CTCF.p2:-27:0.993
chr6	78175822	78175938	reg1020068.p1	6.578	+	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	-2731	-	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	-1393581	-	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-1716871	+	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	1401375	+	BC064611 TSC_hg19_v1_chr6_-_79675737 AK000712	1499872	-	TSC_hg19_v1_chr6_+_79787573 BC036479	1611680	+	BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC064611|PHIP|55023|pleckstrin homology domain interacting protein##AK000712|PHIP|55023|pleckstrin homology domain interacting protein##BC036479|PHIP|55023|pleckstrin homology domain interacting protein	0.137711	
chrX	134841696	134841803	reg1020190.p1	6.578	+	TSC_hg19_v1_chrX_+_134654737 BC140715 AK308423	-187018	+	TSC_hg19_v1_chrX_+_134654584 BX648113 NM_182540 AK096544 AL833319	-187180	+	BC030620 TSC_hg19_v1_chrX_+_134555878 BC051704	-285875	+	AY743709 NM_001017417 BC140735 BC140926 BC144437 BC140913	5485	+	AK098689 AY743710 AY743712 NM_001017436 NM_152582 BC028711 BC140735 BC140926 BC144437	24510	+	AY743711 NM_001017435 BC028711 BC140735 BC140926 BC144437	41784	+	BC140715|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK308423|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BX648113|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##NM_182540|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK096544|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AL833319|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BC030620|LINC00086|399668|long intergenic non-protein coding RNA 86##BC051704|LINC00086|399668|long intergenic non-protein coding RNA 86##AY743709|CT45A1|541466|cancer/testis antigen family 45, member A1##NM_001017417|CT45A1|541466|cancer/testis antigen family 45, member A1##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1##AK098689|CT45A4|441520|cancer/testis antigen family 45, member A4##AY743710|CT45A2|728911|cancer/testis antigen family 45, member A2##AY743712|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_001017436|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_152582|CT45A2|728911|cancer/testis antigen family 45, member A2##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##AY743711|CT45A3|441519|cancer/testis antigen family 45, member A3##NM_001017435|CT45A3|441519|cancer/testis antigen family 45, member A3##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3	0.890795	CTCF.p2:8:0.891
chr1	179163101	179163214	reg1020665.p1	6.577	+	FJ542283 BC065912 AK225255 TSC_hg19_v1_chr1_-_179112210 AK309549 NM_001136000 NM_001168239 NM_005158	-50957	-	TSC_hg19_v1_chr1_+_179051236 BC011746 AK316530 AK299966 CU675711 CU676228 CR457354	-111909	+	BC088368 BC001085 TSC_hg19_v1_chr1_+_179051232 BC018292 AJ299403 AJ299441 BC007571 AK025998	-111932	+	M35296 TSC_hg19_v1_chr1_-_179198813	35617	-	TSC_hg19_v1_chr1_-_179198815 AK311045 NM_001136001 NM_001168236 NM_001168237 NM_001168238 NM_007314	35662	-	NM_001252511 NM_001252512 NM_003101 TSC_hg19_v1_chr1_+_179262876	99709	+	FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##BC011746|TOR3A|64222|torsin family 3, member A##AK316530|TOR3A|64222|torsin family 3, member A##AK299966|TOR3A|64222|torsin family 3, member A##CR457354|TOR3A|64222|torsin family 3, member A##BC088368|TOR3A|64222|torsin family 3, member A##BC001085|TOR3A|64222|torsin family 3, member A##BC018292|TOR3A|64222|torsin family 3, member A##AJ299403|TOR3A|64222|torsin family 3, member A##AJ299441|TOR3A|64222|torsin family 3, member A##BC007571|TOR3A|64222|torsin family 3, member A##AK025998|TOR3A|64222|torsin family 3, member A##M35296|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK311045|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001136001|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168236|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168237|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168238|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_007314|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001252511|SOAT1|6646|sterol O-acyltransferase 1##NM_001252512|SOAT1|6646|sterol O-acyltransferase 1##NM_003101|SOAT1|6646|sterol O-acyltransferase 1	0.05639	
chr2	164467858	164467966	reg1022137.p2	6.577	+	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-772665	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-772788	-	TSC_hg19_v1_chr2_+_163200633 AK312349 M81637 BC005214 AB209768 AB529141 CU675051 AK295413	-1267151	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	124605	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	957092	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	1009981	-	BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK312349|GCA|25801|grancalcin, EF-hand calcium binding protein##M81637|GCA|25801|grancalcin, EF-hand calcium binding protein##BC005214|GCA|25801|grancalcin, EF-hand calcium binding protein##AB209768|GCA|25801|grancalcin, EF-hand calcium binding protein##AK295413|GCA|25801|grancalcin, EF-hand calcium binding protein##BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14	0.131468	
chr17	8476243	8476347	reg1017491.p1	6.576	+	BC008968 TSC_hg19_v1_chr17_-_8424250	-52059	-	TSC_hg19_v1_chr17_+_8339211 AK299559 AF217798 AK056014 NM_001025579 NM_030808 BC026101 AF182078 AY004871	-137105	+	NM_001146684	-175152	-	TSC_hg19_v1_chr17_-_8534040 M69181 AB210026 BC144668 BC150634 NM_005964 U34304 AB621820	57751	-	BC029224 AK057296 NM_001158261 NM_144681	171833	-	BC146949 BC146966 BC171861 NM_001128076	185581	-	BC008968|MYH10|4628|myosin, heavy chain 10, non-muscle##AK299559|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AF217798|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AK056014|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##NM_001025579|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##NM_030808|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##BC026101|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AF182078|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AY004871|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##NM_001146684|RNF222|643904|ring finger protein 222##M69181|MYH10|4628|myosin, heavy chain 10, non-muscle##AB210026|MYH10|4628|myosin, heavy chain 10, non-muscle##BC144668|MYH10|4628|myosin, heavy chain 10, non-muscle##BC150634|MYH10|4628|myosin, heavy chain 10, non-muscle##NM_005964|MYH10|4628|myosin, heavy chain 10, non-muscle##U34304|MYH10|4628|myosin, heavy chain 10, non-muscle##BC029224|CCDC42|146849|coiled-coil domain containing 42##AK057296|CCDC42|146849|coiled-coil domain containing 42##NM_001158261|CCDC42|146849|coiled-coil domain containing 42##NM_144681|CCDC42|146849|coiled-coil domain containing 42##BC146949|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC146966|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC171861|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##NM_001128076|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)	0.784302	CTCF.p2:-9:0.784
chr6	56820070	56820200	reg1020696.p1	6.576	+	BC036119 TSC_hg19_v1_chr6_+_56819931 AK054724	-129	+	TSC_hg19_v1_chr6_+_56819725 NM_152731	-396	+	AK299898 TSC_hg19_v1_chr6_-_56716715	-103421	-	TSC_hg19_v1_chr6_+_56911328 BC041125 NM_020931	91211	+	TSC_hg19_v1_chr6_+_56911464 BC012011 BC029372 AK295519 AK290988 AB587556 CU691960	91352	+	TSC_hg19_v1_chr6_+_56954826 AY055204 NM_001031623 NM_015555	134679	+	BC036119|BEND6|221336|BEN domain containing 6##AK054724|BEND6|221336|BEN domain containing 6##NM_152731|BEND6|221336|BEN domain containing 6##AK299898|DST|667|dystonin##BC041125|KIAA1586|57691|KIAA1586##NM_020931|KIAA1586|57691|KIAA1586##BC012011|KIAA1586|57691|KIAA1586##BC029372|KIAA1586|57691|KIAA1586##AK295519|KIAA1586|57691|KIAA1586##AK290988|KIAA1586|57691|KIAA1586##AY055204|ZNF451|26036|zinc finger protein 451##NM_001031623|ZNF451|26036|zinc finger protein 451##NM_015555|ZNF451|26036|zinc finger protein 451	0.057641	
chr19	28708025	28708133	reg1019097.p2	6.575	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-423151	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-423246	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-423691	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	995981	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	996042	-	NM_001146339	1309411	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.033187	
chr2	46828632	46828731	reg1020195.p2	6.575	+	TSC_hg19_v1_chr2_+_46769905 BC056154 BC070485 BC065291 BC093805 BC101806 AF498976 M31470 AB528045	-58643	+	TSC_hg19_v1_chr2_+_46769874 NM_012249 AK095329	-58832	+	BC034808 NM_080653	-81586	-	BC010864 D13435 TSC_hg19_v1_chr2_-_46844167 BC039303	15481	-	TSC_hg19_v1_chr2_-_46844187 BC021725 BC029408 AK291108 NM_002643 NM_173074	15536	-	TSC_hg19_v1_chr2_+_46844353 NM_014171 AK291298 AF161488 BC018653 BC006980 BC006979	15672	+	BC056154|RHOQ|23433|ras homolog gene family, member Q##BC070485|RHOQ|23433|ras homolog gene family, member Q##BC065291|RHOQ|23433|ras homolog gene family, member Q##BC093805|RHOQ|23433|ras homolog gene family, member Q##BC101806|RHOQ|23433|ras homolog gene family, member Q##AF498976|RHOQ|23433|ras homolog gene family, member Q##M31470|RHOQ|23433|ras homolog gene family, member Q##NM_012249|RHOQ|23433|ras homolog gene family, member Q##AK095329|RHOQ|23433|ras homolog gene family, member Q##BC034808|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_080653|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##D13435|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##BC021725|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##BC029408|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##AK291108|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##NM_002643|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##NM_173074|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##NM_014171|CRIPT|9419|cysteine-rich PDZ-binding protein##AK291298|CRIPT|9419|cysteine-rich PDZ-binding protein##AF161488|CRIPT|9419|cysteine-rich PDZ-binding protein##BC018653|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006980|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006979|CRIPT|9419|cysteine-rich PDZ-binding protein	0.10093	
chr11	67426880	67427001	reg1000931.p1	6.574	+	AY032593 AY040761 AY169233 BC008689 NM_080658	-8822	-	BC113485 BC113487 AY229977 NM_005995	-19913	-	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	-29537	-	AK299956 TSC_hg19_v1_chr11_-_67442068	15103	-	TSC_hg19_v1_chr11_-_67442086 AK309277 NM_000695 AK092464	15191	-	BC007685 NM_001031615	21744	-	AY032593|ACY3|91703|aspartoacylase (aminocyclase) 3##AY040761|ACY3|91703|aspartoacylase (aminocyclase) 3##AY169233|ACY3|91703|aspartoacylase (aminocyclase) 3##BC008689|ACY3|91703|aspartoacylase (aminocyclase) 3##NM_080658|ACY3|91703|aspartoacylase (aminocyclase) 3##BC113485|TBX10|347853|T-box 10##BC113487|TBX10|347853|T-box 10##AY229977|TBX10|347853|T-box 10##NM_005995|TBX10|347853|T-box 10##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##AK299956|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	0.981312	CTCF.p2:-73:0.981
chr3	121602490	121602632	reg1018445.p1	6.574	+	AF217516 NM_018456 TSC_hg19_v1_chr3_+_121554083 BC014589 AY049020 BC014209 AF517829 AK301560 AB528527 CU676923 DQ892648 DQ895887	-48481	+	TSC_hg19_v1_chr3_-_121553908 AB062481 AY714228 NM_001023570 NM_001023571	-48634	-	TSC_hg19_v1_chr3_-_121553886 AY964668 BC005806 D25278 AY964667	-48695	-	NM_001145998 NM_021082 AK289820 AK296895 AK302002 AK304189 BC020743 BC044572 BC038445 S78203	10671	+	AY672837 AY672839 BC044240 AY134857 TSC_hg19_v1_chr3_-_121741095 AK129974 NM_001199799 NM_001199800 NM_175924	138486	-	NM_001206924 NM_001206925 NM_175862 AK294663 AK301237 AK316203 BC040261 L25259 AK291497 AK313103	171693	+	AF217516|EAF2|55840|ELL associated factor 2##NM_018456|EAF2|55840|ELL associated factor 2##BC014589|EAF2|55840|ELL associated factor 2##AY049020|EAF2|55840|ELL associated factor 2##BC014209|EAF2|55840|ELL associated factor 2##AF517829|EAF2|55840|ELL associated factor 2##AK301560|EAF2|55840|ELL associated factor 2##DQ892648|EAF2|55840|ELL associated factor 2##DQ895887|EAF2|55840|ELL associated factor 2##AB062481|IQCB1|9657|IQ motif containing B1##AY714228|IQCB1|9657|IQ motif containing B1##NM_001023570|IQCB1|9657|IQ motif containing B1##NM_001023571|IQCB1|9657|IQ motif containing B1##AY964668|IQCB1|9657|IQ motif containing B1##BC005806|IQCB1|9657|IQ motif containing B1##D25278|IQCB1|9657|IQ motif containing B1##AY964667|IQCB1|9657|IQ motif containing B1##NM_001145998|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##NM_021082|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK289820|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK296895|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK302002|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK304189|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC020743|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC044572|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC038445|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##S78203|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1##BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199799|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199800|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001206924|CD86|942|CD86 molecule##NM_001206925|CD86|942|CD86 molecule##NM_175862|CD86|942|CD86 molecule##AK294663|CD86|942|CD86 molecule##AK301237|CD86|942|CD86 molecule##AK316203|CD86|942|CD86 molecule##BC040261|CD86|942|CD86 molecule##L25259|CD86|942|CD86 molecule##AK291497|CD86|942|CD86 molecule##AK313103|CD86|942|CD86 molecule	0.082647	
chr4	101014706	101014799	reg1019937.p1	6.574	+	TSC_hg19_v1_chr4_+_100871641 AK123926	-143106	+	TSC_hg19_v1_chr4_-_100871513 AK056803 NM_002106 BC103743	-143238	-	AY597416 BC018002 BC020936 D28450 TSC_hg19_v1_chr4_-_100871433	-143296	-	AL832277 BC013592 TSC_hg19_v1_chr4_-_101111626 AK312926 AK094236 NM_145244	96878	-	CU676062 AB590686 AB034695 AK222741 AK304568 AK291831 BC017781 AF205940 AK026875 AK313504 NM_001159694 NM_016242	424408	-	AB385587 AB451338 AB451487 AM393486 AM393713 CU693026 AY904364 BC025714 TSC_hg19_v1_chr4_-_102268080 L14778	1253274	-	AK123926|LOC256880|256880|uncharacterized LOC256880##AK056803|H2AFZ|3015|H2A histone family, member Z##NM_002106|H2AFZ|3015|H2A histone family, member Z##BC103743|H2AFZ|3015|H2A histone family, member Z##AY597416|H2AFZ|3015|H2A histone family, member Z##BC018002|H2AFZ|3015|H2A histone family, member Z##BC020936|H2AFZ|3015|H2A histone family, member Z##D28450|H2AFZ|3015|H2A histone family, member Z##AL832277|DDIT4L|115265|DNA-damage-inducible transcript 4-like##BC013592|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK312926|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK094236|DDIT4L|115265|DNA-damage-inducible transcript 4-like##NM_145244|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AB034695|EMCN|51705|endomucin##AK222741|EMCN|51705|endomucin##AK304568|EMCN|51705|endomucin##AK291831|EMCN|51705|endomucin##BC017781|EMCN|51705|endomucin##AF205940|EMCN|51705|endomucin##AK026875|EMCN|51705|endomucin##AK313504|EMCN|51705|endomucin##NM_001159694|EMCN|51705|endomucin##NM_016242|EMCN|51705|endomucin##AB451338|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AB451487|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393486|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393713|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AY904364|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##BC025714|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##L14778|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	0.629396	CTCF.p2:-14:0.629
chr7	44112023	44112131	reg1021682.p1	6.574	+	M18172 BC073741 BC001904 NM_000290	-6904	-	TSC_hg19_v1_chr7_+_44084324 AK300630 AF151364 BC031687 AB527593 CU680006 CU689228 AF197060 AF250287 CR457167	-27741	+	AK293340 TSC_hg19_v1_chr7_+_44084309 AK027367 BC011677	-27767	+	CU693204 TSC_hg19_v1_chr7_-_44122073 BC062590 BC035685 AF176097 AJ131891 AJ844643 AK307634 AK291638	9982	-	BC049202 TSC_hg19_v1_chr7_-_44122083 AK092903 AX747799	10008	-	TSC_hg19_v1_chr7_-_44122105 AK294449 BC026306 AK023002 NM_013284	10039	-	M18172|PGAM2|5224|phosphoglycerate mutase 2 (muscle)##BC073741|PGAM2|5224|phosphoglycerate mutase 2 (muscle)##BC001904|PGAM2|5224|phosphoglycerate mutase 2 (muscle)##NM_000290|PGAM2|5224|phosphoglycerate mutase 2 (muscle)##AK300630|DBNL|28988|drebrin-like##AF151364|DBNL|28988|drebrin-like##BC031687|DBNL|28988|drebrin-like##AF197060|DBNL|28988|drebrin-like##AF250287|DBNL|28988|drebrin-like##CR457167|DBNL|28988|drebrin-like##AK293340|DBNL|28988|drebrin-like##AK027367|DBNL|28988|drebrin-like##BC011677|DBNL|28988|drebrin-like##BC062590|POLM|27434|polymerase (DNA directed), mu##BC035685|POLM|27434|polymerase (DNA directed), mu##AF176097|POLM|27434|polymerase (DNA directed), mu##AJ131891|POLM|27434|polymerase (DNA directed), mu##AK307634|POLM|27434|polymerase (DNA directed), mu##AK291638|POLM|27434|polymerase (DNA directed), mu##BC049202|POLM|27434|polymerase (DNA directed), mu##AK092903|POLM|27434|polymerase (DNA directed), mu##AK294449|POLM|27434|polymerase (DNA directed), mu##BC026306|POLM|27434|polymerase (DNA directed), mu##AK023002|POLM|27434|polymerase (DNA directed), mu##NM_013284|POLM|27434|polymerase (DNA directed), mu	0.158748	
chr14	94821975	94822096	reg1021011.p1	6.573	+	BC017462 BC036818 BC056259 BC058021 AK225591 TSC_hg19_v1_chr14_-_94789671 AK290821 AK313760 NM_001756	-32371	-	BX248011 NM_001100607 TSC_hg19_v1_chr14_-_94759609 BC022261	-62431	-	TSC_hg19_v1_chr14_-_94759564 AY358597 AK314877	-62473	-	TSC_hg19_v1_chr14_-_94844881 M26123	22848	-	TSC_hg19_v1_chr14_-_94849553 AB527565 BT019455 CU680152 DQ682455 GU727620 M11465 BX248002	27532	-	K01396 X01683 BC015642 BX248257 TSC_hg19_v1_chr14_-_94854940 AK026174 BC070163	32912	-	BC017462|SERPINA6|866|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6##BC036818|SERPINA6|866|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6##BC056259|SERPINA6|866|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6##BC058021|SERPINA6|866|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6##AK225591|SERPINA6|866|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6##AK290821|SERPINA6|866|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6##AK313760|SERPINA6|866|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6##NM_001756|SERPINA6|866|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 6##BX248011|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##NM_001100607|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##BC022261|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##AY358597|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##AK314877|SERPINA10|51156|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10##M26123|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BT019455|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##DQ682455|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##GU727620|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##M11465|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BX248002|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##K01396|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X01683|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC015642|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BX248257|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##AK026174|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC070163|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1	0.026816	
chr4	119693368	119693487	reg1023717.p1	6.573	+	TSC_hg19_v1_chr4_+_119606557 AK055555 AB046847 BC006565 BC007449 NM_020961 AB384254 CU675451	-86816	+	TSC_hg19_v1_chr4_+_119512929 AK024248	-180493	+	TSC_hg19_v1_chr4_-_119273910 AJ001531 BC007761 NM_003619	-419502	-	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	63800	-	TSC_hg19_v1_chr4_-_119757290 NM_014822	63914	-	TSC_hg19_v1_chr4_+_119810008 AL833547 NM_001128933 NM_001128934 NM_133477 BC150629 AK307711 CR936673 AK304121 AL832031 AL833294 AL832363 BC136256 AM392848 AM393854 EU481975	116657	+	AK055555|METTL14|57721|methyltransferase like 14##AB046847|METTL14|57721|methyltransferase like 14##BC006565|METTL14|57721|methyltransferase like 14##BC007449|METTL14|57721|methyltransferase like 14##NM_020961|METTL14|57721|methyltransferase like 14##AK024248|LOC729218|729218|uncharacterized LOC729218##AJ001531|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC007761|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##NM_003619|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##NM_014822|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AL833547|SYNPO2|171024|synaptopodin 2##NM_001128933|SYNPO2|171024|synaptopodin 2##NM_001128934|SYNPO2|171024|synaptopodin 2##NM_133477|SYNPO2|171024|synaptopodin 2##BC150629|SYNPO2|171024|synaptopodin 2##AK307711|SYNPO2|171024|synaptopodin 2##CR936673|SYNPO2|171024|synaptopodin 2##AK304121|SYNPO2|171024|synaptopodin 2##AL832031|SYNPO2|171024|synaptopodin 2##AL833294|SYNPO2|171024|synaptopodin 2##AL832363|SYNPO2|171024|synaptopodin 2##BC136256|SYNPO2|171024|synaptopodin 2##AM392848|SYNPO2|171024|synaptopodin 2##AM393854|SYNPO2|171024|synaptopodin 2##EU481975|SYNPO2|171024|synaptopodin 2	0.821767	CTCF.p2:-8:0.822
chr11	61975593	61975719	reg1023390.p1	6.572	+	BC062693 AJ224171 BC069170 BC069289 NM_006552	-17958	+	TSC_hg19_v1_chr11_+_61891482 AK307633 BC098576 NM_001040694 NM_020238 AK056195 AK310714 BC032678	-84184	+	TSC_hg19_v1_chr11_+_61735277 AK093779 AX748301 BC132894 BC132896	-240322	+	AF071219 NM_002407 BC062218 AJ224173	495	+	NM_006551 BC069290 BC104840 BC104838	34084	+	BC067220 NM_002411 U33147 BC128252 BC128402 AY217100	62002	+	BC062693|SCGB1D1|10648|secretoglobin, family 1D, member 1##AJ224171|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069170|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069289|SCGB1D1|10648|secretoglobin, family 1D, member 1##NM_006552|SCGB1D1|10648|secretoglobin, family 1D, member 1##AK307633|INCENP|3619|inner centromere protein antigens 135/155kDa##BC098576|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_001040694|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_020238|INCENP|3619|inner centromere protein antigens 135/155kDa##AK056195|INCENP|3619|inner centromere protein antigens 135/155kDa##AK310714|INCENP|3619|inner centromere protein antigens 135/155kDa##BC032678|INCENP|3619|inner centromere protein antigens 135/155kDa##AK093779|LOC399900|399900|uncharacterized LOC399900##BC132894|LOC399900|399900|uncharacterized LOC399900##BC132896|LOC399900|399900|uncharacterized LOC399900##AF071219|SCGB2A1|4246|secretoglobin, family 2A, member 1##NM_002407|SCGB2A1|4246|secretoglobin, family 2A, member 1##BC062218|SCGB2A1|4246|secretoglobin, family 2A, member 1##AJ224173|SCGB2A1|4246|secretoglobin, family 2A, member 1##NM_006551|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC069290|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104840|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104838|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC067220|SCGB2A2|4250|secretoglobin, family 2A, member 2##NM_002411|SCGB2A2|4250|secretoglobin, family 2A, member 2##U33147|SCGB2A2|4250|secretoglobin, family 2A, member 2##BC128252|SCGB2A2|4250|secretoglobin, family 2A, member 2##BC128402|SCGB2A2|4250|secretoglobin, family 2A, member 2##AY217100|SCGB2A2|4250|secretoglobin, family 2A, member 2	0.0	
chr13	62528356	62528489	reg1022458.p1	6.572	+	AK289924 NM_022843	-538768	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-539169	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-1556943	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	5276082	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	8154119	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	9911837	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.973165	CTCF.p2:24:0.973
chr16	14826339	14826461	reg1021988.p2	6.572	+	BC106731 BC106732 BC111804 NM_003561 U95301	-37923	-	TSC_hg19_v1_chr16_+_14726837 BC003054 AK291114 AK297067	-99557	+	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	-99661	+	TSC_hg19_v1_chr16_+_14927651 NM_014287 BC065535	101243	+	TSC_hg19_v1_chr16_+_14927721 X57398	101360	+	AB528194 AF132984 NM_006985	204899	+	BC106731|PLA2G10|8399|phospholipase A2, group X##BC106732|PLA2G10|8399|phospholipase A2, group X##BC111804|PLA2G10|8399|phospholipase A2, group X##NM_003561|PLA2G10|8399|phospholipase A2, group X##U95301|PLA2G10|8399|phospholipase A2, group X##BC003054|BFAR|51283|bifunctional apoptosis regulator##AK291114|BFAR|51283|bifunctional apoptosis regulator##AK297067|BFAR|51283|bifunctional apoptosis regulator##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator##NM_014287|NOMO1|23420|NODAL modulator 1##BC065535|NOMO1|23420|NODAL modulator 1##X57398|NOMO1|23420|NODAL modulator 1##AF132984|NPIP|9284|nuclear pore complex interacting protein##NM_006985|NPIP|9284|nuclear pore complex interacting protein	0.0	
chr16	2171487	2171599	reg1021664.p1	6.572	+	AB209025 TSC_hg19_v1_chr16_-_2159898	-11665	-	TSC_hg19_v1_chr16_+_2128185 AK125096	-43331	+	TSC_hg19_v1_chr16_+_2097985 AB210000 NM_000548 NM_001077183 NM_001114382 AK294548 AK295672 AK299343 BC150300 BX647816	-73532	+	U24497 TSC_hg19_v1_chr16_-_2185898 L33243 NM_000296 NM_001009944	14356	-	TSC_hg19_v1_chr16_+_2198609 AY646153 BC066913 NM_014353	27085	+	TSC_hg19_v1_chr16_+_2198707 BC007681	27202	+	AB209025|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##AK125096|TSC2|7249|tuberous sclerosis 2##AB210000|TSC2|7249|tuberous sclerosis 2##NM_000548|TSC2|7249|tuberous sclerosis 2##NM_001077183|TSC2|7249|tuberous sclerosis 2##NM_001114382|TSC2|7249|tuberous sclerosis 2##AK295672|TSC2|7249|tuberous sclerosis 2##AK299343|TSC2|7249|tuberous sclerosis 2##BC150300|TSC2|7249|tuberous sclerosis 2##BX647816|TSC2|7249|tuberous sclerosis 2##U24497|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##L33243|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##NM_000296|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##NM_001009944|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##AY646153|RAB26|25837|RAB26, member RAS oncogene family##BC066913|RAB26|25837|RAB26, member RAS oncogene family##NM_014353|RAB26|25837|RAB26, member RAS oncogene family##BC007681|RAB26|25837|RAB26, member RAS oncogene family	0.019947	
chr3	39854168	39854303	reg1023458.p1	6.571	+	TSC_hg19_v1_chr3_+_39851138 BC092512 AK126013 AF396687 NM_015460 BC109311 BC109312	-3060	+	NM_182935 BC075796 AK127034 AK290187 BC022471	-345116	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	-405093	+	BC031275 AK057627 AK309874 AK309698 TSC_hg19_v1_chr3_-_40351022 BC045736 BC118565 BC106900	496833	-	NM_005875 TSC_hg19_v1_chr3_+_40351187 AK223448 BC006996 AF077052	496945	+	TSC_hg19_v1_chr3_+_40351197 AF263452	496971	+	BC092512|MYRIP|25924|myosin VIIA and Rab interacting protein##AK126013|MYRIP|25924|myosin VIIA and Rab interacting protein##AF396687|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_015460|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109311|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109312|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA##BC031275|FLJ33065|440952|uncharacterized LOC440952##AK057627|FLJ33065|440952|uncharacterized LOC440952##AK309874|FLJ33065|440952|uncharacterized LOC440952##BC045736|FLJ33065|440952|uncharacterized LOC440952##BC118565|FLJ33065|440952|uncharacterized LOC440952##BC106900|FLJ33065|440952|uncharacterized LOC440952##NM_005875|EIF1B|10289|eukaryotic translation initiation factor 1B##AK223448|EIF1B|10289|eukaryotic translation initiation factor 1B##BC006996|EIF1B|10289|eukaryotic translation initiation factor 1B##AF077052|EIF1B|10289|eukaryotic translation initiation factor 1B##AF263452|EIF1B|10289|eukaryotic translation initiation factor 1B	0.971908	CTCF.p2:-7:0.972
chr9	11343	11499	reg1021145.p1	6.571	+	None	None	None	None	None	None	None	None	None	AK289708 NM_182905	18317	-	BC089432 NM_207305	106995	-	AY295766 CU675219 HQ258394 AK315855 BC132759 AK297292 TSC_hg19_v1_chr9_-_179017 AY320414 BC009573 AF257330 AY343911 BC013432 AK290648 BC005996 NM_001145355 NM_001145356 NM_018491	167572	-	AK289708|WASH1|100287171|WAS protein family homolog 1##NM_182905|WASH1|100287171|WAS protein family homolog 1##BC089432|FOXD4|2298|forkhead box D4##NM_207305|FOXD4|2298|forkhead box D4##AY295766|CBWD1|55871|COBW domain containing 1##HQ258394|CBWD1|55871|COBW domain containing 1##AK315855|CBWD1|55871|COBW domain containing 1##BC132759|CBWD1|55871|COBW domain containing 1##AK297292|CBWD1|55871|COBW domain containing 1##AY320414|CBWD1|55871|COBW domain containing 1##BC009573|CBWD1|55871|COBW domain containing 1##AF257330|CBWD1|55871|COBW domain containing 1##AY343911|CBWD1|55871|COBW domain containing 1##BC013432|CBWD1|55871|COBW domain containing 1##AK290648|CBWD1|55871|COBW domain containing 1##BC005996|CBWD1|55871|COBW domain containing 1##NM_001145355|CBWD1|55871|COBW domain containing 1##NM_001145356|CBWD1|55871|COBW domain containing 1##NM_018491|CBWD1|55871|COBW domain containing 1	2.079193	CTCF.p2:-17:0.999	CTCF.p2:-75:1.000
chr9	764152	764256	reg1018919.p1	6.571	+	TSC_hg19_v1_chr9_+_706828 BC038116 NM_153186	-57374	+	AB205112 TSC_hg19_v1_chr9_+_686677	-77538	+	AK311119 AB205111 TSC_hg19_v1_chr9_+_684289	-79960	+	AF130728 AY442914 AY442915 NM_021951 AK313594 AJ276801 AL162131 BC040847 EU446468 AB463577 CU691924	77559	+	NM_021240 BC113584 BC117245	212761	+	AF193873 TSC_hg19_v1_chr9_+_977425	213201	+	BC038116|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_153186|KANK1|23189|KN motif and ankyrin repeat domains 1##AF130728|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442914|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442915|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021951|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AK313594|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AJ276801|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AL162131|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BC040847|DMRT1|1761|doublesex and mab-3 related transcription factor 1##EU446468|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021240|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC113584|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC117245|DMRT3|58524|doublesex and mab-3 related transcription factor 3##AF193873|DMRT3|58524|doublesex and mab-3 related transcription factor 3	0.042684	
chr1	14421651	14421785	reg1021550.p2	6.570	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-345777	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-345795	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-345833	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	503476	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	829001	+	AY505121 NM_001018001	834577	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.186021	
chr5	77458214	77458341	reg1023055.p1	6.570	+	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	-386145	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	-523763	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	-523848	-	BC113045 CU691576 DQ894915 EU176289 TSC_hg19_v1_chr5_-_77590458 AK225908 U91931	132148	-	TSC_hg19_v1_chr5_-_77590488 AY623424 AK303300	132200	-	TSC_hg19_v1_chr5_-_77590495 U81504	132215	-	BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##EU446696|OTP|23440|orthopedia homeobox##DQ894915|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##EU176289|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK225908|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U91931|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AY623424|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK303300|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U81504|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit	0.968348	CTCF.p2:13:0.968
chrX	110688863	110688995	reg1025269.p1	6.570	+	AF040254 AF040255 TSC_hg19_v1_chrX_-_110655421 BC027925 AK290455 AK299822 NM_178151 NM_001195553 NM_178152 NM_178153	-33508	-	AJ003112 NM_000555	-34556	-	AJ000388 TSC_hg19_v1_chrX_-_110513775 NM_014289	-175166	-	NM_001039210 NM_001099922 NM_001168385 NM_018466 TSC_hg19_v1_chrX_+_110924425 AK300394 AK302729 AK311608 AK312229 BC005336 AF220051 AK316306 AK316522 AK304712 AK302890	235490	+	NM_001195576 NM_001195578	430423	+	BC034811 NM_001195577	436195	+	AF040254|DCX|1641|doublecortin##AF040255|DCX|1641|doublecortin##BC027925|DCX|1641|doublecortin##AK290455|DCX|1641|doublecortin##AK299822|DCX|1641|doublecortin##NM_178151|DCX|1641|doublecortin##NM_001195553|DCX|1641|doublecortin##NM_178152|DCX|1641|doublecortin##NM_178153|DCX|1641|doublecortin##AJ003112|DCX|1641|doublecortin##NM_000555|DCX|1641|doublecortin##AJ000388|CAPN6|827|calpain 6##NM_014289|CAPN6|827|calpain 6##NM_001039210|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_001099922|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_001168385|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_018466|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK300394|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK302729|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK311608|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK312229|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##BC005336|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AF220051|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK316306|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK316522|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK304712|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK302890|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_001195576|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195578|LOC100329135|100329135|uncharacterized LOC100329135##BC034811|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195577|LOC100329135|100329135|uncharacterized LOC100329135	0.999705	CTCF.p2:15:1.000
chr2	11270178	11270317	reg1022052.p1	6.569	+	BC026110 NM_002236 TSC_hg19_v1_chr2_+_11052109	-218162	+	TSC_hg19_v1_chr2_-_10952912 AK294347 D49489 BC001312 NM_005742	-317327	-	TSC_hg19_v1_chr2_-_10952851 DQ891186 DQ894369 AK289428	-317419	-	AK057872 NM_182500 BC120930 AK292828	2969	+	BC027625 NM_152391 TSC_hg19_v1_chr2_+_11295562	25304	+	TSC_hg19_v1_chr2_+_11295592 AK001091	25334	+	BC026110|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##NM_002236|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6##D49489|PDIA6|10130|protein disulfide isomerase family A, member 6##BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6##NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6##AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6##AK057872|C2orf50|130813|chromosome 2 open reading frame 50##NM_182500|C2orf50|130813|chromosome 2 open reading frame 50##BC120930|C2orf50|130813|chromosome 2 open reading frame 50##AK292828|C2orf50|130813|chromosome 2 open reading frame 50##BC027625|PQLC3|130814|PQ loop repeat containing 3##NM_152391|PQLC3|130814|PQ loop repeat containing 3##AK001091|PQLC3|130814|PQ loop repeat containing 3	0.108694	
chr3	52312835	52312978	reg1022778.p3	6.569	+	TSC_hg19_v1_chr3_-_52312656 NM_025222	-250	-	TSC_hg19_v1_chr3_-_52312406 AB590669 AY358264 BX648628 AK291380	-516	-	BC018941 AK074290 TSC_hg19_v1_chr3_-_52294468	-18459	-	AF448855 AY172690 BC036862 NM_001144951 NM_145262 TSC_hg19_v1_chr3_+_52321852 AK074215	8937	+	TSC_hg19_v1_chr3_+_52321862 BC042151 BC021896	8968	+	AB037831 AB290163 NM_015512	37428	+	NM_025222|WDR82|80335|WD repeat domain 82##AY358264|WDR82|80335|WD repeat domain 82##BX648628|WDR82|80335|WD repeat domain 82##AK291380|WDR82|80335|WD repeat domain 82##BC018941|WDR82|80335|WD repeat domain 82##AK074290|WDR82|80335|WD repeat domain 82##AF448855|GLYCTK|132158|glycerate kinase##AY172690|GLYCTK|132158|glycerate kinase##BC036862|GLYCTK|132158|glycerate kinase##NM_001144951|GLYCTK|132158|glycerate kinase##NM_145262|GLYCTK|132158|glycerate kinase##AK074215|GLYCTK|132158|glycerate kinase##BC042151|GLYCTK|132158|glycerate kinase##BC021896|GLYCTK|132158|glycerate kinase##AB037831|DNAH1|25981|dynein, axonemal, heavy chain 1##AB290163|DNAH1|25981|dynein, axonemal, heavy chain 1##NM_015512|DNAH1|25981|dynein, axonemal, heavy chain 1	0.579715	CTCF.p2:3:0.580
chrX	23652422	23652602	reg1022127.p2	6.569	+	AK298796 NM_173495 AK054858 BC121061	-299452	+	AY039237 NM_182699 BC067878 BC051703	-634428	+	GQ355336 NM_152577 AK098601 BC074910 BC126190 BC126192 HQ258412 HQ258552	-1361444	+	TSC_hg19_v1_chrX_+_23685615 BC016770	33111	+	TSC_hg19_v1_chrX_+_23685640 BC007107 NM_006406 U25182	33134	+	TSC_hg19_v1_chrX_+_23685665 BC003609 AB590368 DQ893599 DQ895027 CR541668 CR541705	33160	+	AK298796|PTCHD1|139411|patched domain containing 1##NM_173495|PTCHD1|139411|patched domain containing 1##AK054858|PTCHD1|139411|patched domain containing 1##BC121061|PTCHD1|139411|patched domain containing 1##AY039237|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##NM_182699|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC067878|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC051703|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##GQ355336|ZNF645|158506|zinc finger protein 645##NM_152577|ZNF645|158506|zinc finger protein 645##AK098601|ZNF645|158506|zinc finger protein 645##BC074910|ZNF645|158506|zinc finger protein 645##BC126190|ZNF645|158506|zinc finger protein 645##BC126192|ZNF645|158506|zinc finger protein 645##HQ258412|ZNF645|158506|zinc finger protein 645##HQ258552|ZNF645|158506|zinc finger protein 645##BC016770|PRDX4|10549|peroxiredoxin 4##BC007107|PRDX4|10549|peroxiredoxin 4##NM_006406|PRDX4|10549|peroxiredoxin 4##U25182|PRDX4|10549|peroxiredoxin 4##BC003609|PRDX4|10549|peroxiredoxin 4##DQ893599|PRDX4|10549|peroxiredoxin 4##DQ895027|PRDX4|10549|peroxiredoxin 4##CR541668|PRDX4|10549|peroxiredoxin 4##CR541705|PRDX4|10549|peroxiredoxin 4	0.964144	CTCF.p2:-2:0.964
chr10	127318466	127318579	reg1021967.p1	6.568	+	TSC_hg19_v1_chr10_-_126849600 BC047018 NM_001083914	-468929	-	BC052276 AL833398 BC002486 TSC_hg19_v1_chr10_-_126849101 NM_001329	-469406	-	TSC_hg19_v1_chr10_-_126849010 AF016507 BC072020	-469496	-	BC127766 BC127767 AK131010 BC062717 NM_001128202	53130	-	TSC_hg19_v1_chr10_-_127408052 BC015213 AK094354	89512	-	BC026172 NM_001202438 NM_015608 BC028715 TSC_hg19_v1_chr10_+_127408115 BC105929 BC107479	89591	+	BC047018|CTBP2|1488|C-terminal binding protein 2##NM_001083914|CTBP2|1488|C-terminal binding protein 2##BC052276|CTBP2|1488|C-terminal binding protein 2##AL833398|CTBP2|1488|C-terminal binding protein 2##BC002486|CTBP2|1488|C-terminal binding protein 2##NM_001329|CTBP2|1488|C-terminal binding protein 2##AF016507|CTBP2|1488|C-terminal binding protein 2##BC072020|CTBP2|1488|C-terminal binding protein 2##BC127766|C10orf122|387718|chromosome 10 open reading frame 122##BC127767|C10orf122|387718|chromosome 10 open reading frame 122##AK131010|C10orf122|387718|chromosome 10 open reading frame 122##BC062717|C10orf122|387718|chromosome 10 open reading frame 122##NM_001128202|C10orf122|387718|chromosome 10 open reading frame 122##AK094354|FLJ37035|399821|uncharacterized LOC399821##BC026172|C10orf137|26098|chromosome 10 open reading frame 137##NM_001202438|C10orf137|26098|chromosome 10 open reading frame 137##NM_015608|C10orf137|26098|chromosome 10 open reading frame 137##BC028715|C10orf137|26098|chromosome 10 open reading frame 137##BC105929|C10orf137|26098|chromosome 10 open reading frame 137##BC107479|C10orf137|26098|chromosome 10 open reading frame 137	0.673211	CTCF.p2:5:0.673
chr11	15848547	15848663	reg1022898.p1	6.568	+	AB236158 NM_001042536	-712122	+	AB236159 NM_001031853	-714636	+	BC008428 AK291188 BC092468 NM_000728	-753479	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	575796	-	BC037866 NM_001145811	581822	-	AF309034 NM_033326	649320	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	0.744206	CTCF.p2:-5:0.744
chr1	545597	545777	reg1007779.p4	6.568	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-178039	+	NM_001005484	-476597	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-516282	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	76355	-	TSC_hg19_v1_chr1_-_714015 BC006361	168330	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	217208	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	3.694918	CTCF.p2:29:0.977	CTCF.p2:-38:0.977	CTCF.p2:97:0.764	CTCF.p2:-106:0.977
chr22	42674444	42674571	reg1022733.p2	6.568	+	AB527391 NM_005650 NM_181492	-63130	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	-147626	-	AB463001 CU013213 CU013501 M20403 X08006 BC066877 BC067432 TSC_hg19_v1_chr22_-_42526809 BC106757 BC106758 BC126858 CR456430 BC075023 BC075024	-147700	-	BC038245 TSC_hg19_v1_chr22_-_42765218	90695	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	153874	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	241260	-	NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013213|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013501|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##M20403|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##X08006|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC066877|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC067432|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106757|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106758|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC126858|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CR456430|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075023|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075024|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)	0.10351	
chr4	142079517	142079636	reg1020701.p1	6.568	+	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	-25045	-	NM_015130 TSC_hg19_v1_chr4_-_141677529	-402077	-	U28480 BC069556 BC096736 BC098168 BC098258 BC098352 NM_021833	-589656	-	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	62479	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	62510	+	AK290619 NM_000585 NM_172175 BC018149 U14407	478190	+	AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)##U28480|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC069556|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC096736|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098168|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098258|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098352|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##NM_021833|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15	0.883762	CTCF.p2:-2:0.884
chr1	54147905	54148004	reg1020523.p1	6.567	+	AK302085 TSC_hg19_v1_chr1_+_53925533 BC029566	-222424	+	AK057273 NM_033067 AJ291671	-222847	+	TSC_hg19_v1_chr1_-_53793743 NM_001018054 NM_004631 NM_017522 NM_033300	-354173	-	AK090634 AX746550 NM_147193	51922	-	DQ141696 AK302910 BX648031 TSC_hg19_v1_chr1_-_54304004 AK298909 AK295000	156020	-	AK001269 AL354612 AL354613 TSC_hg19_v1_chr1_-_54304168 BC003082 NM_001168551 NM_018087	156211	-	AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1##DQ141696|TMEM48|55706|transmembrane protein 48##AK302910|TMEM48|55706|transmembrane protein 48##BX648031|TMEM48|55706|transmembrane protein 48##AK298909|TMEM48|55706|transmembrane protein 48##AK295000|TMEM48|55706|transmembrane protein 48##AK001269|TMEM48|55706|transmembrane protein 48##AL354612|TMEM48|55706|transmembrane protein 48##AL354613|TMEM48|55706|transmembrane protein 48##BC003082|TMEM48|55706|transmembrane protein 48##NM_001168551|TMEM48|55706|transmembrane protein 48##NM_018087|TMEM48|55706|transmembrane protein 48	0.850375	CTCF.p2:9:0.850
chr17	73127559	73127660	reg1022086.p3	6.567	+	TSC_hg19_v1_chr17_+_73106069 AK300997 AK310697 BC011728 NM_024585	-21555	+	TSC_hg19_v1_chr17_+_73084056 BC009684 NM_004695	-43554	+	TSC_hg19_v1_chr17_+_73043325 D79998	-84276	+	TSC_hg19_v1_chr17_-_73127869 CU692564 BC002516 BC022334 BC008183 BC047763 BC017454 AF154829 AK000419 NM_001252377 NM_014595	248	-	DQ891909 DQ895094 DQ896835 EU176653 CU674698 AF177862 BC001420 TSC_hg19_v1_chr17_-_73150608 AF266846 AK223321 AK312613	22943	-	AY322169 AY322170 NM_001002032 NM_001002033 NM_016185 AF086910	23164	-	AK300997|ARMC7|79637|armadillo repeat containing 7##BC011728|ARMC7|79637|armadillo repeat containing 7##NM_024585|ARMC7|79637|armadillo repeat containing 7##BC009684|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##NM_004695|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##D79998|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic##AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic##DQ891909|HN1|51155|hematological and neurological expressed 1##DQ895094|HN1|51155|hematological and neurological expressed 1##DQ896835|HN1|51155|hematological and neurological expressed 1##EU176653|HN1|51155|hematological and neurological expressed 1##AF177862|HN1|51155|hematological and neurological expressed 1##BC001420|HN1|51155|hematological and neurological expressed 1##AF266846|HN1|51155|hematological and neurological expressed 1##AK223321|HN1|51155|hematological and neurological expressed 1##AK312613|HN1|51155|hematological and neurological expressed 1##AY322169|HN1|51155|hematological and neurological expressed 1##AY322170|HN1|51155|hematological and neurological expressed 1##NM_001002032|HN1|51155|hematological and neurological expressed 1##NM_001002033|HN1|51155|hematological and neurological expressed 1##NM_016185|HN1|51155|hematological and neurological expressed 1##AF086910|HN1|51155|hematological and neurological expressed 1	0.07665	
chr2	99218137	99218277	reg1021713.p2	6.567	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-156849	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-255302	+	DQ426863 NM_001079878 NM_001298 DQ067460	-255574	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	6735	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	6843	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	6863	+	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)	0.223017	CTCF.p2:2:0.223
chr4	40843122	40843265	reg1025037.p1	6.567	+	BC042401 NM_024677 BC036568 AK024063	-91247	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-210486	-	TSC_hg19_v1_chr4_-_40631882 BC034402 BC071585 NM_001098634	-211328	-	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	15982	-	BC088372 TSC_hg19_v1_chr4_-_40936716	93485	-	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	373376	-	BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK304206|RBM47|54502|RNA binding motif protein 47##BC034402|RBM47|54502|RNA binding motif protein 47##BC071585|RBM47|54502|RNA binding motif protein 47##NM_001098634|RBM47|54502|RNA binding motif protein 47##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	1.25787	CTCF.p2:-2:0.999	CTCF.p2:-89:0.259
chr8	84463099	84463229	reg1022558.p2	6.567	+	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	-1708691	-	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-1818405	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-1829638	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	632295	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	632379	+	TSC_hg19_v1_chr8_+_85095702 AK095026	632571	+	AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like	0.023364	
chr1	178743561	178743692	reg1024698.p1	6.566	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	-49253	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-261360	+	AF047711 NM_004841 AK290308	-432992	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	96520	-	TSC_hg19_v1_chr1_+_178995028 AB007944	251394	+	TSC_hg19_v1_chr1_+_178995055 AB480690 BC051794 NM_014864	251438	+	BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##AB007944|FAM20B|9917|family with sequence similarity 20, member B##AB480690|FAM20B|9917|family with sequence similarity 20, member B##BC051794|FAM20B|9917|family with sequence similarity 20, member B##NM_014864|FAM20B|9917|family with sequence similarity 20, member B	0.881152	CTCF.p2:-30:0.881
chr1	45173703	45173811	reg1019588.p2	6.566	+	BC026115 NM_001145636	-33364	+	AK296548 TSC_hg19_v1_chr1_-_45140143 BC007521	-33609	-	CR457348 AK026006 AK225405 TSC_hg19_v1_chr1_-_45140099 BC064520 NM_024587 AL832539	-33670	-	TSC_hg19_v1_chr1_+_45205518 AB264115 NM_006845	31741	+	AK124208 AK300756 AK312606 TSC_hg19_v1_chr1_+_45205533 BC008764 U63743 BC014924	31785	+	TSC_hg19_v1_chr1_+_45205568 AK290688 AB590244 BT006759 CR450302 CU677119 CU679091 DQ893800 EU176178	31824	+	BC026115|C1orf228|339541|chromosome 1 open reading frame 228##NM_001145636|C1orf228|339541|chromosome 1 open reading frame 228##AK296548|TMEM53|79639|transmembrane protein 53##BC007521|TMEM53|79639|transmembrane protein 53##CR457348|TMEM53|79639|transmembrane protein 53##AK026006|TMEM53|79639|transmembrane protein 53##AK225405|TMEM53|79639|transmembrane protein 53##BC064520|TMEM53|79639|transmembrane protein 53##NM_024587|TMEM53|79639|transmembrane protein 53##AL832539|TMEM53|79639|transmembrane protein 53##AB264115|KIF2C|11004|kinesin family member 2C##NM_006845|KIF2C|11004|kinesin family member 2C##AK300756|KIF2C|11004|kinesin family member 2C##AK312606|KIF2C|11004|kinesin family member 2C##BC008764|KIF2C|11004|kinesin family member 2C##U63743|KIF2C|11004|kinesin family member 2C##BC014924|KIF2C|11004|kinesin family member 2C##AK290688|KIF2C|11004|kinesin family member 2C##BT006759|KIF2C|11004|kinesin family member 2C##CR450302|KIF2C|11004|kinesin family member 2C##DQ893800|KIF2C|11004|kinesin family member 2C##EU176178|KIF2C|11004|kinesin family member 2C	0.585201	CTCF.p2:-13:0.585
chr15	51522141	51522288	reg1025233.p1	6.566	+	AY517501 NM_207381	-124742	-	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	-135364	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	-321287	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	108550	-	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	111580	+	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	392759	-	AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2	0.710604	CTCF.p2:-6:0.711
chr18	62759123	62759234	reg1022677.p1	6.566	+	NM_001031848 NM_002640 NM_198833 AK300391 L40377 TSC_hg19_v1_chr18_+_61637345 BC034528 U92984 BX571754 AK313782	-1121865	+	NM_001123366	-1142591	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	-1176434	+	AJ007611 NM_033646	658309	+	TSC_hg19_v1_chr18_+_63417845 BC036786	658688	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	659024	+	NM_001031848|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_002640|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_198833|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK300391|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##L40377|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BC034528|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##U92984|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BX571754|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK313782|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2	0.066045	
chr19	45996889	45996990	reg1020338.p2	6.566	+	AF004224 TSC_hg19_v1_chr19_-_45996506 NM_206901	-446	-	TSC_hg19_v1_chr19_+_45971253 EU178109 EU178110 EU178111 EU178112 EU178113 EU178114 EU178115 EU178116 L49169 NM_001114171 NM_006732 AK097324 AK225070 BC051767 BC036724 BC063042	-25670	+	TSC_hg19_v1_chr19_-_45927176 NM_001166049 NM_001983	-69764	-	TSC_hg19_v1_chr19_-_46000271 AF004222 BC014244 BC073874 AK291967 NM_005619 NM_206900	3308	-	NM_001080401 AK097444 TSC_hg19_v1_chr19_+_46001873 BC028228	4903	+	TSC_hg19_v1_chr19_+_46010688 NM_003370	13749	+	AF004224|RTN2|6253|reticulon 2##NM_206901|RTN2|6253|reticulon 2##EU178109|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178110|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178111|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178112|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178113|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178114|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178115|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178116|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##L49169|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_001114171|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_006732|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##AK225070|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##BC036724|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##BC063042|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_001166049|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##NM_001983|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AF004222|RTN2|6253|reticulon 2##BC014244|RTN2|6253|reticulon 2##BC073874|RTN2|6253|reticulon 2##AK291967|RTN2|6253|reticulon 2##NM_005619|RTN2|6253|reticulon 2##NM_206900|RTN2|6253|reticulon 2##NM_001080401|PPM1N|147699|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)##AK097444|PPM1N|147699|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)##BC028228|PPM1N|147699|protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)##NM_003370|VASP|7408|vasodilator-stimulated phosphoprotein	0.227619	
chr5	71314107	71314224	reg1020013.p1	6.566	+	NM_004291 BC029882 U16826 CR542216 CU688778 EU831800 EU831877	-299111	+	TSC_hg19_v1_chr5_+_70944968 AK025591	-369178	+	AF261884 TSC_hg19_v1_chr5_+_70883182 BC065027 CU688004	-430950	+	TSC_hg19_v1_chr5_+_71403301 BC017240 NM_005909 BC025240 BC139918 BC150196 BC046114 AK096273 AK308147 BX647077 BC039822 BC108733 BC032516 BC073993 BC056145 BC063669 BC094834 AB463119	89114	+	TSC_hg19_v1_chr5_+_71502701 AK125194	188598	+	CU687962 D87453 TSC_hg19_v1_chr5_-_71616067 BC064902 BC011818 AK299412 AK025417 AK309065	301893	-	NM_004291|CARTPT|9607|CART prepropeptide##BC029882|CARTPT|9607|CART prepropeptide##U16826|CARTPT|9607|CART prepropeptide##CR542216|CARTPT|9607|CART prepropeptide##EU831800|CARTPT|9607|CART prepropeptide##EU831877|CARTPT|9607|CART prepropeptide##AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AF261884|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##BC065027|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##BC017240|MAP1B|4131|microtubule-associated protein 1B##NM_005909|MAP1B|4131|microtubule-associated protein 1B##BC025240|MAP1B|4131|microtubule-associated protein 1B##BC139918|MAP1B|4131|microtubule-associated protein 1B##BC150196|MAP1B|4131|microtubule-associated protein 1B##BC046114|MAP1B|4131|microtubule-associated protein 1B##AK096273|MAP1B|4131|microtubule-associated protein 1B##AK308147|MAP1B|4131|microtubule-associated protein 1B##BX647077|MAP1B|4131|microtubule-associated protein 1B##BC039822|MAP1B|4131|microtubule-associated protein 1B##BC108733|MAP1B|4131|microtubule-associated protein 1B##BC032516|MAP1B|4131|microtubule-associated protein 1B##BC073993|MAP1B|4131|microtubule-associated protein 1B##BC056145|MAP1B|4131|microtubule-associated protein 1B##BC063669|MAP1B|4131|microtubule-associated protein 1B##BC094834|MAP1B|4131|microtubule-associated protein 1B##AK125194|MAP1B|4131|microtubule-associated protein 1B##D87453|MRPS27|23107|mitochondrial ribosomal protein S27##BC064902|MRPS27|23107|mitochondrial ribosomal protein S27##BC011818|MRPS27|23107|mitochondrial ribosomal protein S27##AK299412|MRPS27|23107|mitochondrial ribosomal protein S27##AK025417|MRPS27|23107|mitochondrial ribosomal protein S27##AK309065|MRPS27|23107|mitochondrial ribosomal protein S27	0.0	
chr10	120969117	120969242	reg1022587.p2	6.565	+	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-1918	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-30832	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-30876	-	NM_002925	326865	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	333011	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	386929	-	BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.060352	
chr10	54489392	54489544	reg1021586.p2	6.565	+	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-415353	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-1030121	-	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-1655177	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	41958	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2071530	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	2869306	+	NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5	0.593507	CTCF.p2:0:0.594
chr4	176481908	176482021	reg1021170.p1	6.565	+	NM_001130703 NM_001130704 NM_001130705 NM_014269 AK292410 BC036070	-642431	+	U93917 BC036086 NM_001042543 NM_006529	-731544	-	AK300524 NM_000860 NM_001145816	-1038173	-	CU692222 CU692662 DQ892372 DQ895581 TSC_hg19_v1_chr4_-_176733403	251429	-	BC010461 BC022508 TSC_hg19_v1_chr4_-_176733419 D49958	251477	-	BC044612 BC053954 TSC_hg19_v1_chr4_-_176733905	251942	-	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29##NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29##AK292410|ADAM29|11086|ADAM metallopeptidase domain 29##BC036070|ADAM29|11086|ADAM metallopeptidase domain 29##U93917|GLRA3|8001|glycine receptor, alpha 3##BC036086|GLRA3|8001|glycine receptor, alpha 3##NM_001042543|GLRA3|8001|glycine receptor, alpha 3##NM_006529|GLRA3|8001|glycine receptor, alpha 3##AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##DQ892372|GPM6A|2823|glycoprotein M6A##DQ895581|GPM6A|2823|glycoprotein M6A##BC010461|GPM6A|2823|glycoprotein M6A##BC022508|GPM6A|2823|glycoprotein M6A##D49958|GPM6A|2823|glycoprotein M6A##BC044612|GPM6A|2823|glycoprotein M6A##BC053954|GPM6A|2823|glycoprotein M6A	0.943627	CTCF.p2:-19:0.944
chr6	152589499	152589621	reg1021367.p1	6.565	+	X03635 AK304833 M69297 AF258449 AF258450 AF258451 NM_000125 TSC_hg19_v1_chr6_+_152128813 BC128573 BC128574 EU930361 AB587448 AB307713 AY750962 JF810888 U47678	-460694	+	NM_001122740 U68067	-461107	+	NM_001122741 AK293019 AK313644	-462737	+	TSC_hg19_v1_chr6_-_152623240 AK310977	33691	-	TSC_hg19_v1_chr6_-_152702331 BX537517	112781	-	AK056122 TSC_hg19_v1_chr6_-_152702456 BC039121	112914	-	X03635|ESR1|2099|estrogen receptor 1##AK304833|ESR1|2099|estrogen receptor 1##M69297|ESR1|2099|estrogen receptor 1##AF258449|ESR1|2099|estrogen receptor 1##AF258450|ESR1|2099|estrogen receptor 1##AF258451|ESR1|2099|estrogen receptor 1##NM_000125|ESR1|2099|estrogen receptor 1##BC128573|ESR1|2099|estrogen receptor 1##BC128574|ESR1|2099|estrogen receptor 1##AB307713|ESR1|2099|estrogen receptor 1##AY750962|ESR1|2099|estrogen receptor 1##JF810888|ESR1|2099|estrogen receptor 1##U47678|ESR1|2099|estrogen receptor 1##NM_001122740|ESR1|2099|estrogen receptor 1##U68067|ESR1|2099|estrogen receptor 1##NM_001122741|ESR1|2099|estrogen receptor 1##AK293019|ESR1|2099|estrogen receptor 1##AK313644|ESR1|2099|estrogen receptor 1##AK310977|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##BX537517|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AK056122|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##BC039121|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	0.957708	CTCF.p2:22:0.958
chr9	116725420	116725536	reg1020727.p2	6.564	+	TSC_hg19_v1_chr9_+_116638585 BC036039 NM_133374 BC136287 BC143826 AK126896 BC053892	-86879	+	TSC_hg19_v1_chr9_+_116356408 BC018072 BC019039 CU676160	-368997	+	AF490838 NM_144489 AK054584	-369268	+	TSC_hg19_v1_chr9_-_116840540 CU692002 AB463406 X04494	115022	-	TSC_hg19_v1_chr9_-_116840546 AY544123	115069	-	TSC_hg19_v1_chr9_-_116840581 X04225 AK290837	115091	-	BC036039|ZNF618|114991|zinc finger protein 618##NM_133374|ZNF618|114991|zinc finger protein 618##BC136287|ZNF618|114991|zinc finger protein 618##BC143826|ZNF618|114991|zinc finger protein 618##AK126896|ZNF618|114991|zinc finger protein 618##BC053892|ZNF618|114991|zinc finger protein 618##BC018072|RGS3|5998|regulator of G-protein signaling 3##BC019039|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3##X04494|AMBP|259|alpha-1-microglobulin/bikunin precursor##AY544123|AMBP|259|alpha-1-microglobulin/bikunin precursor##X04225|AMBP|259|alpha-1-microglobulin/bikunin precursor##AK290837|AMBP|259|alpha-1-microglobulin/bikunin precursor	0.995666	CTCF.p2:14:0.996
chr10	70657314	70657450	reg1022940.p1	6.563	+	NM_001130162 AK124681	-69802	+	BC140011 NM_001130159 NM_001130160 NM_001130161 NM_152709 AY842014 AY842015 AY842016 AY842017	-70046	+	TSC_hg19_v1_chr10_+_70502264 AK000741	-155104	+	TSC_hg19_v1_chr10_+_70661066 BC000272 NM_024045 AK223297 AF334103 AK301431 AK293577 BC014263	3642	+	TSC_hg19_v1_chr10_+_70661097 CU674120 DQ892547 DQ895758	3735	+	BC104671 NM_004728 TSC_hg19_v1_chr10_+_70715925 BC009432 U41387 AK315585 BC008071 BC004182 BC017228 AB527408 CU675917	58550	+	NM_001130162|STOX1|219736|storkhead box 1##AK124681|STOX1|219736|storkhead box 1##BC140011|STOX1|219736|storkhead box 1##NM_001130159|STOX1|219736|storkhead box 1##NM_001130160|STOX1|219736|storkhead box 1##NM_001130161|STOX1|219736|storkhead box 1##NM_152709|STOX1|219736|storkhead box 1##AY842014|STOX1|219736|storkhead box 1##AY842015|STOX1|219736|storkhead box 1##AY842016|STOX1|219736|storkhead box 1##AY842017|STOX1|219736|storkhead box 1##AK000741|CCAR1|55749|cell division cycle and apoptosis regulator 1##BC000272|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##NM_024045|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##AK223297|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##AF334103|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##AK301431|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##AK293577|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##BC014263|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##DQ892547|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##DQ895758|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##BC104671|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##NM_004728|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC009432|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##U41387|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##AK315585|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC008071|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC004182|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC017228|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	0.972878	CTCF.p2:20:0.973
chr11	67706608	67706706	reg1017226.p2	6.563	+	TSC_hg19_v1_chr11_-_67572800 BC063712 BC110365	-133905	-	TSC_hg19_v1_chr11_-_67450557 AB055770	-256111	-	BC007685 NM_001031615	-257973	-	TSC_hg19_v1_chr11_-_67771527 BC101568 BC105104 BC025669 AJ422142 AJ271326 BC092472 BC033623 NM_030930	64910	-	TSC_hg19_v1_chr11_+_67776039 EF411198 NM_001161473	69374	+	TSC_hg19_v1_chr11_+_67777790 NM_000694 NM_001030010 BC002553 AK291505	71133	+	BC063712|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC110365|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##AB055770|RPL37|6167|ribosomal protein L37##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC101568|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC105104|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC025669|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ422142|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ271326|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC092472|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC033623|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##NM_030930|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##EF411198|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001161473|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_000694|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001030010|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##BC002553|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##AK291505|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1	0.0	
chr3	184259022	184259145	reg1022194.p1	6.563	+	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	-161043	+	BC130322 BC136338 BC143982 L33410 NM_000460 NM_001177597 NM_001177598 TSC_hg19_v1_chr3_-_184095936	-163145	-	TSC_hg19_v1_chr3_+_184081196 NM_006232 Z49199 BC000739 AB464044 EU446997	-177854	+	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	20499	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	170680	-	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	270840	+	AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##BC130322|THPO|7066|thrombopoietin##BC136338|THPO|7066|thrombopoietin##BC143982|THPO|7066|thrombopoietin##L33410|THPO|7066|thrombopoietin##NM_000460|THPO|7066|thrombopoietin##NM_001177597|THPO|7066|thrombopoietin##NM_001177598|THPO|7066|thrombopoietin##NM_006232|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##Z49199|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##BC000739|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##EU446997|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3##AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)	1.042112	CTCF.p2:-17:1.000
chr4	76817008	76817151	reg1024625.p1	6.563	+	TSC_hg19_v1_chr4_+_76649846 D86326 NM_003715 BC032654 AB590104 AM392946 AM393489 CU689466 DQ894066 EU176195	-167165	+	TSC_hg19_v1_chr4_+_76649814 AK314289	-167264	+	TSC_hg19_v1_chr4_+_76649761 BC016672 AL832010 BC006398	-167315	+	BX648754 AF023456 NM_006239	6548	-	TSC_hg19_v1_chr4_-_76862135 AB161353 AK309271 BC006388 BC011854 NM_001042402 NM_014435	45050	-	TSC_hg19_v1_chr4_-_76878561 AF132198	61482	-	D86326|USO1|8615|USO1 vesicle docking protein homolog (yeast)##NM_003715|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC032654|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AM392946|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AM393489|USO1|8615|USO1 vesicle docking protein homolog (yeast)##DQ894066|USO1|8615|USO1 vesicle docking protein homolog (yeast)##EU176195|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BX648754|PPEF2|5470|protein phosphatase, EF-hand calcium binding domain 2##AF023456|PPEF2|5470|protein phosphatase, EF-hand calcium binding domain 2##NM_006239|PPEF2|5470|protein phosphatase, EF-hand calcium binding domain 2##AB161353|NAAA|27163|N-acylethanolamine acid amidase##AK309271|NAAA|27163|N-acylethanolamine acid amidase##BC006388|NAAA|27163|N-acylethanolamine acid amidase##BC011854|NAAA|27163|N-acylethanolamine acid amidase##NM_001042402|NAAA|27163|N-acylethanolamine acid amidase##NM_014435|NAAA|27163|N-acylethanolamine acid amidase##AF132198|SDAD1|55153|SDA1 domain containing 1	0.997458	CTCF.p2:-13:0.997
chr7	44574294	44574425	reg1019389.p1	6.563	+	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	-44078	-	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	-209068	-	TSC_hg19_v1_chr7_+_44240639 BC007319 AF091079 U95735 DQ890653 DQ893833 CU675611 AB451317 AB451447 BT007078 CR456989 CR542008	-333673	+	AY437865 AY515256 FJ481111 TSC_hg19_v1_chr7_-_44580901 BC117178 BC143731 BC143756 AF192522 AF192523 NM_001101648 NM_013389	6526	-	TSC_hg19_v1_chr7_-_44613508 CR457213 DQ891215 DQ894398 AB385026 AL136700 AK022774 AK309276 BC001235 AK222662 AK315363 AF247666 AJ131712	39172	-	NM_019082	39777	-	AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3##AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC007319|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AF091079|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##U95735|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ890653|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ893833|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451317|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451447|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BT007078|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR456989|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR542008|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##CR457213|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##DQ891215|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##DQ894398|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AL136700|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK022774|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK309276|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##BC001235|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK222662|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK315363|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AF247666|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AJ131712|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##NM_019082|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56	0.0	
chr15	78534550	78534675	reg1021028.p1	6.562	+	DQ896428 EU176436 CU679287 BC009289 AB014531 AK294202 AK295269 AF179481 AK054882 AK299597 AK314508 NM_001199377 NM_015162	-7668	-	TSC_hg19_v1_chr15_+_78441739 U07681 AB529210 CU692430 DQ892774 DQ893529 DQ896022	-92858	+	TSC_hg19_v1_chr15_+_78441734 AK222973	-92878	+	TSC_hg19_v1_chr15_+_78556511 BC021720 NM_018602 AK098079 BX648710	21932	+	TSC_hg19_v1_chr15_+_78556901 AK096616 NM_001130182	22332	+	BC031044 NM_001130183	23928	+	DQ896428|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##EU176436|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##BC009289|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK294202|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK295269|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AF179481|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK054882|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK299597|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##AK314508|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##NM_001199377|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##NM_015162|ACSBG1|23205|acyl-CoA synthetase bubblegum family member 1##U07681|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ892774|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ893529|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ896022|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK222973|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC021720|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_018602|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##AK098079|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##BX648710|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##AK096616|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_001130182|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##BC031044|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_001130183|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4	0.382038	CTCF.p2:20:0.382
chr4	107290760	107290867	reg1020820.p2	6.562	+	NM_001195138	-2222	-	AK074305 NM_001163436	-52986	-	TSC_hg19_v1_chr4_+_107237727 U10117	-53083	+	NM_014421 AF177395	666639	-	BC011392 AF016496 CR457028 CU690750 BC040940 TSC_hg19_v1_chr4_-_108641372 BC050627 AF033026 AK292774 AK297981 Y10387 BC032513 AF105227 NM_005443	1350551	-	AK290344 NM_001136258 AF452717	1454954	+	NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like##AK074305|TBCK|93627|TBC1 domain containing kinase##NM_001163436|TBCK|93627|TBC1 domain containing kinase##U10117|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_014421|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##AF177395|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##BC011392|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF016496|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##CR457028|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC040940|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC050627|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF033026|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK292774|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK297981|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##Y10387|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC032513|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF105227|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##NM_005443|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK290344|SGMS2|166929|sphingomyelin synthase 2##NM_001136258|SGMS2|166929|sphingomyelin synthase 2##AF452717|SGMS2|166929|sphingomyelin synthase 2	0.924621	CTCF.p2:-4:0.925
chr6	25054239	25054404	reg1021340.p1	6.562	+	TSC_hg19_v1_chr6_-_24936189 AK299047	-118138	-	AB002384 NM_014722	-143127	-	U49187 AK300138 BC001232 NM_015864	-176804	-	TSC_hg19_v1_chr6_+_25279316 BC040903	224997	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	225337	+	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	225573	+	AK299047|FAM65B|9750|family with sequence similarity 65, member B##AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A	0.111597	
chr7	93344672	93344812	reg1022905.p1	6.562	+	AB022177 AK313996 NM_001164737 NM_001742	-140704	-	AB022178 NM_001164738	-155621	-	BC017888 NM_017667 NM_024553 TSC_hg19_v1_chr7_+_92861678 AK126478 AL833112 AK055965 AK299582 AB100163 BC108708 BC132740 BC132742 AB058764 BC152424 CU676100 AB385511	-483016	+	CU675117 DQ892533 DQ895744 L27624 AY691946 D29992 AK075427 AK024817 AK075425 AK092499 AK129833 AK313260 BC005330 NM_006528 TSC_hg19_v1_chr7_-_93520066	175287	-	BC029367 NM_021955	191077	+	NM_004126 BC009709	206314	+	AB022177|CALCR|799|calcitonin receptor##AK313996|CALCR|799|calcitonin receptor##NM_001164737|CALCR|799|calcitonin receptor##NM_001742|CALCR|799|calcitonin receptor##AB022178|CALCR|799|calcitonin receptor##NM_001164738|CALCR|799|calcitonin receptor##BC017888|CCDC132|55610|coiled-coil domain containing 132##NM_017667|CCDC132|55610|coiled-coil domain containing 132##NM_024553|CCDC132|55610|coiled-coil domain containing 132##AK126478|CCDC132|55610|coiled-coil domain containing 132##AL833112|CCDC132|55610|coiled-coil domain containing 132##AK055965|CCDC132|55610|coiled-coil domain containing 132##AK299582|CCDC132|55610|coiled-coil domain containing 132##AB100163|CCDC132|55610|coiled-coil domain containing 132##BC108708|CCDC132|55610|coiled-coil domain containing 132##BC132740|CCDC132|55610|coiled-coil domain containing 132##BC132742|CCDC132|55610|coiled-coil domain containing 132##AB058764|CCDC132|55610|coiled-coil domain containing 132##BC152424|CCDC132|55610|coiled-coil domain containing 132##DQ892533|TFPI2|7980|tissue factor pathway inhibitor 2##DQ895744|TFPI2|7980|tissue factor pathway inhibitor 2##L27624|TFPI2|7980|tissue factor pathway inhibitor 2##AY691946|TFPI2|7980|tissue factor pathway inhibitor 2##D29992|TFPI2|7980|tissue factor pathway inhibitor 2##AK075427|TFPI2|7980|tissue factor pathway inhibitor 2##AK024817|TFPI2|7980|tissue factor pathway inhibitor 2##AK075425|TFPI2|7980|tissue factor pathway inhibitor 2##AK092499|TFPI2|7980|tissue factor pathway inhibitor 2##AK129833|TFPI2|7980|tissue factor pathway inhibitor 2##AK313260|TFPI2|7980|tissue factor pathway inhibitor 2##BC005330|TFPI2|7980|tissue factor pathway inhibitor 2##NM_006528|TFPI2|7980|tissue factor pathway inhibitor 2##BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	0.036079	
chrY	234482	234662	reg1013237.p2	6.562	+	NM_018390 BC064136 BC005028 BC000888 BC032072	-86465	+	None	None	None	None	None	None	AK293506 NM_013239	63117	-	NM_000451 NM_006883 U89331	300506	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	1047012	-	NM_018390|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC064136|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC005028|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC000888|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC032072|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##AK293506|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_013239|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_000451|SHOX|6473|short stature homeobox##NM_006883|SHOX|6473|short stature homeobox##U89331|SHOX|6473|short stature homeobox##AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2	0.151322	
chr1	154325708	154325826	reg1021532.p1	6.561	+	TSC_hg19_v1_chr1_+_154301249 AK054886	-24511	+	AY302537 NM_020452	-25492	+	TSC_hg19_v1_chr1_+_154298034 NM_001005855 X58235	-27704	+	NM_000565 NM_001206866 NM_181359 X12830 BC089410 TSC_hg19_v1_chr1_+_154377822	51983	+	AK223582 BC132684 BC132686 TSC_hg19_v1_chr1_+_154377856	52085	+	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	52307	+	AK054886|ATP8B2|57198|ATPase, class I, type 8B, member 2##AY302537|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_020452|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_001005855|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_000565|IL6R|3570|interleukin 6 receptor##NM_001206866|IL6R|3570|interleukin 6 receptor##NM_181359|IL6R|3570|interleukin 6 receptor##X12830|IL6R|3570|interleukin 6 receptor##BC089410|IL6R|3570|interleukin 6 receptor##AK223582|IL6R|3570|interleukin 6 receptor##BC132684|IL6R|3570|interleukin 6 receptor##BC132686|IL6R|3570|interleukin 6 receptor##AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor	0.39231	CTCF.p2:-19:0.392
chr12	101065939	101066078	reg1021735.p2	6.561	+	TSC_hg19_v1_chr12_+_100967484 BC043366 NM_174942	-98519	+	TSC_hg19_v1_chr12_+_100967438 AK315189	-98577	+	AF478445 AF478446 NM_001206992 NM_001206993 AK296612 BX571749 AB463943 BC071778 AK296647	-168839	+	NM_178826 TSC_hg19_v1_chr12_+_101188522 AK091591 AX747079 AK316105 AK293810	122546	+	AK313788 AF536216 AY081220 NM_145913	537991	-	TSC_hg19_v1_chr12_+_101673904 NM_014503 AK307934 AJ006778	607897	+	BC043366|GAS2L3|283431|growth arrest-specific 2 like 3##NM_174942|GAS2L3|283431|growth arrest-specific 2 like 3##AK315189|GAS2L3|283431|growth arrest-specific 2 like 3##AF478445|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AF478446|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206992|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206993|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AK296612|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BX571749|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC071778|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AK296647|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_178826|ANO4|121601|anoctamin 4##AK091591|ANO4|121601|anoctamin 4##AK316105|ANO4|121601|anoctamin 4##AK293810|ANO4|121601|anoctamin 4##AK313788|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AF536216|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AY081220|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_145913|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_014503|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK307934|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AJ006778|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)	0.999843	CTCF.p2:-11:1.000
chr12	109244655	109244835	reg1019955.p1	6.561	+	AK095421 NM_001161331	-23419	-	TSC_hg19_v1_chr12_-_109125295 AK023205 AK223073 AK304839 AK311315 AK316065 AB030656 NM_014325	-119453	-	TSC_hg19_v1_chr12_-_109125284 BC002342 AB209909	-119465	-	AB072355 AB072356 TSC_hg19_v1_chr12_-_109251307	6545	-	TSC_hg19_v1_chr12_-_109251360 BC062341 NM_001161330 NM_018984	6677	-	NM_001917 AX741655 AX741656 AX741658 AX776478 AX776479 AX786386 AK312995 BX538210 BC029057 BC074770	29175	+	AK095421|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161331|SSH1|54434|slingshot homolog 1 (Drosophila)##AK023205|CORO1C|23603|coronin, actin binding protein, 1C##AK223073|CORO1C|23603|coronin, actin binding protein, 1C##AK304839|CORO1C|23603|coronin, actin binding protein, 1C##AK311315|CORO1C|23603|coronin, actin binding protein, 1C##AK316065|CORO1C|23603|coronin, actin binding protein, 1C##AB030656|CORO1C|23603|coronin, actin binding protein, 1C##NM_014325|CORO1C|23603|coronin, actin binding protein, 1C##BC002342|CORO1C|23603|coronin, actin binding protein, 1C##AB209909|CORO1C|23603|coronin, actin binding protein, 1C##AB072355|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072356|SSH1|54434|slingshot homolog 1 (Drosophila)##BC062341|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161330|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_018984|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001917|DAO|1610|D-amino-acid oxidase##AX741655|DAO|1610|D-amino-acid oxidase##AX741656|DAO|1610|D-amino-acid oxidase##AX741658|DAO|1610|D-amino-acid oxidase##AX776478|DAO|1610|D-amino-acid oxidase##AX776479|DAO|1610|D-amino-acid oxidase##AX786386|DAO|1610|D-amino-acid oxidase##AK312995|DAO|1610|D-amino-acid oxidase##BX538210|DAO|1610|D-amino-acid oxidase##BC029057|DAO|1610|D-amino-acid oxidase##BC074770|DAO|1610|D-amino-acid oxidase	0.0	
chr13	67812546	67812659	reg1022737.p1	6.561	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-8098	-	AK289924 NM_022843	-5822948	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-5823349	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	2869939	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	4627657	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	4628161	-	BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)	0.970439	CTCF.p2:12:0.970
chr14	79400433	79400541	reg1021091.p1	6.561	+	AB018286 BC152457 NM_004796	-530395	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-1134037	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-1172978	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	345217	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	1277417	-	AK292210 NM_000793	1296909	-	AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	0.346104	CTCF.p2:-12:0.346
chr4	91236372	91236484	reg1021003.p1	6.561	+	BC051694 NM_207491	-80247	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-187710	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-420366	+	AB209318 NM_001510 AK308611	1989164	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	3513633	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	3892383	+	BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.998611	CTCF.p2:-14:0.999
chr5	81047183	81047333	reg1022482.p1	6.561	+	TSC_hg19_v1_chr5_-_81046990 NM_012446	-150	-	TSC_hg19_v1_chr5_-_81046929 AB528651 CU677799 DQ891620 DQ894812 EU176592 EU831646 EU831730 AK293544 AK074537 AK294864 AK297494 AF161465 AF077048 AK299858 AK312337 CR936787 AL080076 BC017020	-359	-	BC075011 BC075010 AK122960 AB078619 BC089437 NM_130767 TSC_hg19_v1_chr5_-_80690052	-357256	-	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	220587	+	AF318326 TSC_hg19_v1_chr5_+_81267992	220732	+	TSC_hg19_v1_chr5_+_81268100 AL136912	220840	+	NM_012446|SSBP2|23635|single-stranded DNA binding protein 2##DQ891620|SSBP2|23635|single-stranded DNA binding protein 2##DQ894812|SSBP2|23635|single-stranded DNA binding protein 2##EU176592|SSBP2|23635|single-stranded DNA binding protein 2##EU831646|SSBP2|23635|single-stranded DNA binding protein 2##EU831730|SSBP2|23635|single-stranded DNA binding protein 2##AK293544|SSBP2|23635|single-stranded DNA binding protein 2##AK074537|SSBP2|23635|single-stranded DNA binding protein 2##AK294864|SSBP2|23635|single-stranded DNA binding protein 2##AK297494|SSBP2|23635|single-stranded DNA binding protein 2##AF161465|SSBP2|23635|single-stranded DNA binding protein 2##AF077048|SSBP2|23635|single-stranded DNA binding protein 2##AK299858|SSBP2|23635|single-stranded DNA binding protein 2##AK312337|SSBP2|23635|single-stranded DNA binding protein 2##CR936787|SSBP2|23635|single-stranded DNA binding protein 2##AL080076|SSBP2|23635|single-stranded DNA binding protein 2##BC017020|SSBP2|23635|single-stranded DNA binding protein 2##BC075011|ACOT12|134526|acyl-CoA thioesterase 12##BC075010|ACOT12|134526|acyl-CoA thioesterase 12##AK122960|ACOT12|134526|acyl-CoA thioesterase 12##AB078619|ACOT12|134526|acyl-CoA thioesterase 12##BC089437|ACOT12|134526|acyl-CoA thioesterase 12##NM_130767|ACOT12|134526|acyl-CoA thioesterase 12##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AF318326|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AL136912|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)	0.0	
chr10	102278616	102278751	reg1024433.p1	6.560	+	Y11094 NM_003393 AB073637	-55878	+	AK023036 TSC_hg19_v1_chr10_+_102133657	-145055	+	TSC_hg19_v1_chr10_+_102123601 AF113690	-155171	+	AF274863 BX640914 BC044569 BC053949 BC034946 NM_015490 AK289975 BC071580 AK294551	967	-	CR533490 DQ893286 DQ896618 EU831639 EU831723 TSC_hg19_v1_chr10_-_102289622 AF044958 AK289579 BC000466 BC019276	10932	-	AF077028 AK293081 AK304277 TSC_hg19_v1_chr10_-_102289637 AF115968 AL080056 NM_005004 AK295867	10953	-	Y11094|WNT8B|7479|wingless-type MMTV integration site family, member 8B##NM_003393|WNT8B|7479|wingless-type MMTV integration site family, member 8B##AB073637|WNT8B|7479|wingless-type MMTV integration site family, member 8B##AK023036|LINC00263|90271|long intergenic non-protein coding RNA 263##AF274863|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BX640914|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC044569|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC053949|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC034946|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##NM_015490|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##AK289975|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC071580|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##AK294551|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##CR533490|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##DQ893286|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##DQ896618|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##EU831639|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##EU831723|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF044958|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AK289579|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##BC000466|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##BC019276|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF077028|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF115968|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AL080056|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##NM_005004|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa	0.999832	CTCF.p2:5:1.000
chr1	159893563	159893743	reg1020056.p2	6.560	+	BC089391 BC027874 NM_012337 BC064386 AF094758 AK308262 AK225566 AK225582 AK292249	-23728	-	HQ258612 BC132893 BC132895 NM_001013661	-61275	-	AK096506 NM_001134233	-68517	-	BC009357 TSC_hg19_v1_chr1_-_159895269	1612	-	TSC_hg19_v1_chr1_-_159895294 BC002616 D21261 GU727636 NM_003564 AK291562 AK298654	1634	-	TSC_hg19_v1_chr1_-_159915401 AB037776 BC030141 NM_001135050 NM_020789 AY358128	21741	-	BC089391|CCDC19|25790|coiled-coil domain containing 19##BC027874|CCDC19|25790|coiled-coil domain containing 19##NM_012337|CCDC19|25790|coiled-coil domain containing 19##BC064386|CCDC19|25790|coiled-coil domain containing 19##AF094758|CCDC19|25790|coiled-coil domain containing 19##AK308262|CCDC19|25790|coiled-coil domain containing 19##AK225566|CCDC19|25790|coiled-coil domain containing 19##AK225582|CCDC19|25790|coiled-coil domain containing 19##AK292249|CCDC19|25790|coiled-coil domain containing 19##HQ258612|VSIG8|391123|V-set and immunoglobulin domain containing 8##BC132893|VSIG8|391123|V-set and immunoglobulin domain containing 8##BC132895|VSIG8|391123|V-set and immunoglobulin domain containing 8##NM_001013661|VSIG8|391123|V-set and immunoglobulin domain containing 8##AK096506|C1orf204|284677|chromosome 1 open reading frame 204##NM_001134233|C1orf204|284677|chromosome 1 open reading frame 204##BC009357|TAGLN2|8407|transgelin 2##BC002616|TAGLN2|8407|transgelin 2##D21261|TAGLN2|8407|transgelin 2##GU727636|TAGLN2|8407|transgelin 2##NM_003564|TAGLN2|8407|transgelin 2##AK291562|TAGLN2|8407|transgelin 2##AK298654|TAGLN2|8407|transgelin 2##AB037776|IGSF9|57549|immunoglobulin superfamily, member 9##BC030141|IGSF9|57549|immunoglobulin superfamily, member 9##NM_001135050|IGSF9|57549|immunoglobulin superfamily, member 9##NM_020789|IGSF9|57549|immunoglobulin superfamily, member 9##AY358128|IGSF9|57549|immunoglobulin superfamily, member 9	0.0	
chr14	71340425	71340553	reg1022895.p1	6.560	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-64680	-	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	-231880	+	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	-273112	-	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	33644	+	TSC_hg19_v1_chr14_+_71374441 BC140784	33962	+	AF090989 AF090990 NM_015556	655552	+	AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9##AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	0.976579	CTCF.p2:-3:0.977
chr15	75280493	75280650	reg1022407.p1	6.560	+	AK000381 NM_017793	-30797	-	CU675593 AY034074 BC002497 BC007270 TSC_hg19_v1_chr15_-_75249114	-31547	-	TSC_hg19_v1_chr15_-_75230386 AK026623 BC024240 NM_004255	-50131	-	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	7336	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	35357	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	35410	+	AK000381|RPP25|54913|ribonuclease P/MRP 25kDa subunit##NM_017793|RPP25|54913|ribonuclease P/MRP 25kDa subunit##AY034074|RPP25|54913|ribonuclease P/MRP 25kDa subunit##BC002497|RPP25|54913|ribonuclease P/MRP 25kDa subunit##BC007270|RPP25|54913|ribonuclease P/MRP 25kDa subunit##AK026623|COX5A|9377|cytochrome c oxidase subunit Va##BC024240|COX5A|9377|cytochrome c oxidase subunit Va##NM_004255|COX5A|9377|cytochrome c oxidase subunit Va##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase	0.903008	CTCF.p2:3:0.903
chr5	111496401	111496546	reg1021081.p2	6.560	+	AK298779 NM_001142474 NM_001142475	-183899	-	NM_001142477 TSC_hg19_v1_chr5_-_111093886 NM_001142476	-402620	-	NM_001142479 NM_001142480 BC011050 TSC_hg19_v1_chr5_-_111093377 NM_001142478	-403115	-	TSC_hg19_v1_chr5_+_111496560 AB002437	96	+	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	258400	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	546738	+	AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13##BC011050|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13##AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli	0.0	
chr8	72723145	72723263	reg1020690.p2	6.560	+	BC035138 BC048982 TSC_hg19_v1_chr8_-_72459928	-263295	-	AJ000098 NM_000503 TSC_hg19_v1_chr8_-_72274481	-448729	-	TSC_hg19_v1_chr8_-_72274302 AK307379	-448911	-	TSC_hg19_v1_chr8_+_72756330 AK123315 BC094782	33070	+	TSC_hg19_v1_chr8_+_72756336 BX647470	33136	+	TSC_hg19_v1_chr8_-_72756449 AF087036 AB463900 BT007169	33235	-	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK123315|LOC100132891|100132891|uncharacterized LOC100132891##AF087036|MSC|9242|musculin##BT007169|MSC|9242|musculin	0.993894	CTCF.p2:-9:0.994
chr13	24450570	24450665	reg1021720.p1	6.559	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	-297085	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-306162	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-442777	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	12399	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	12897	-	NM_001135816 BC142999	12975	+	BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.0	
chr13	63201046	63201150	reg1022077.p1	6.559	+	AK289924 NM_022843	-1211444	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-1211845	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-2229619	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	4603406	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	7481443	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	9239161	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.813974	CTCF.p2:6:0.814
chr4	22358982	22359086	reg1021925.p1	6.559	+	NM_147182 TSC_hg19_v1_chr4_-_21950396	-408650	-	BX648990 DQ148490 NM_001035003	-659717	-	DQ148491 NM_001035004	-812756	-	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	158520	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	335558	+	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	1532619	-	NM_147182|KCNIP4|80333|Kv channel interacting protein 4##BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##DQ148491|KCNIP4|80333|Kv channel interacting protein 4##NM_001035004|KCNIP4|80333|Kv channel interacting protein 4##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	0.897105	CTCF.p2:14:0.897
chr1	6483635	6483757	reg1021963.p1	6.558	+	AB463714 BC132698 BC136963 BC142687 TSC_hg19_v1_chr1_-_6479976 AK091122 NM_019089	-3766	-	BC017365 AK057168 NM_007274	-29897	-	BT006888 TSC_hg19_v1_chr1_-_6453439 AB074415 AB074416 D88894 AK289572 AK300831	-30285	-	TSC_hg19_v1_chr1_+_6484835 AL136880 NM_031475	1135	+	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	42506	-	TSC_hg19_v1_chr1_-_6545530 AK299523	61829	-	BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)##NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC017365|ACOT7|11332|acyl-CoA thioesterase 7##AK057168|ACOT7|11332|acyl-CoA thioesterase 7##NM_007274|ACOT7|11332|acyl-CoA thioesterase 7##BT006888|ACOT7|11332|acyl-CoA thioesterase 7##AB074415|ACOT7|11332|acyl-CoA thioesterase 7##AB074416|ACOT7|11332|acyl-CoA thioesterase 7##D88894|ACOT7|11332|acyl-CoA thioesterase 7##AK289572|ACOT7|11332|acyl-CoA thioesterase 7##AK300831|ACOT7|11332|acyl-CoA thioesterase 7##AL136880|ESPN|83715|espin##NM_031475|ESPN|83715|espin##U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AK299523|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	0.997282	CTCF.p2:-9:0.997
chr17	73073876	73074057	reg1022151.p2	6.558	+	TSC_hg19_v1_chr17_+_73043325 D79998	-30633	+	TSC_hg19_v1_chr17_+_73043288 BC033329 NM_015353	-30737	+	BC032245 TSC_hg19_v1_chr17_-_73043079	-30887	-	TSC_hg19_v1_chr17_+_73084056 BC009684 NM_004695	10089	+	TSC_hg19_v1_chr17_+_73106069 AK300997 AK310697 BC011728 NM_024585	32088	+	TSC_hg19_v1_chr17_-_73127869 CU692564 BC002516 BC022334 BC008183 BC047763 BC017454 AF154829 AK000419 NM_001252377 NM_014595	53891	-	D79998|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC033329|KCTD2|23510|potassium channel tetramerisation domain containing 2##NM_015353|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC032245|ATP5H|10476|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d##BC009684|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##NM_004695|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##AK300997|ARMC7|79637|armadillo repeat containing 7##BC011728|ARMC7|79637|armadillo repeat containing 7##NM_024585|ARMC7|79637|armadillo repeat containing 7##BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic##AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic	0.328664	CTCF.p2:-12:0.329
chr4	145533149	145533262	reg1020580.p2	6.558	+	AY950614 DQ893046 L07251 L07253 S77893 U00177 U00178 U00179 X57023 M12857 M36281 X51798 BC013328 EU338231 EU338232 EU338233 EU338234 L31860 X08054 BC005319 AK290561 NM_002099	-471360	-	AY509882 AY509883 AY950609 AY950610 AY950611 AY950612 U05255 J02982 BC121077 BC121078 EU338223 EU338224 EU338225 EU338226 EU338227 EU338228 EU338229 EU338230 EU338235 EU338236 EU338237 EU338238 BC069310 X08055 NM_002100	-592738	-	EU176664 BC064396 BC017864 M29610 NM_002102 NM_198682	-706518	-	NM_022475 AY009951 TSC_hg19_v1_chr4_+_145567307 AY009317 BC025311 BC015636 BC009298	34043	+	NM_001040876 NM_002940	485950	+	TSC_hg19_v1_chr4_-_146019349 AF132794 AL080090 BC005217 AB012109 NM_014885	486132	-	AY950614|GYPA|2993|glycophorin A (MNS blood group)##DQ893046|GYPA|2993|glycophorin A (MNS blood group)##L07251|GYPA|2993|glycophorin A (MNS blood group)##L07253|GYPA|2993|glycophorin A (MNS blood group)##U00177|GYPA|2993|glycophorin A (MNS blood group)##U00178|GYPA|2993|glycophorin A (MNS blood group)##U00179|GYPA|2993|glycophorin A (MNS blood group)##X57023|GYPA|2993|glycophorin A (MNS blood group)##M12857|GYPA|2993|glycophorin A (MNS blood group)##M36281|GYPA|2993|glycophorin A (MNS blood group)##X51798|GYPA|2993|glycophorin A (MNS blood group)##BC013328|GYPA|2993|glycophorin A (MNS blood group)##EU338231|GYPA|2993|glycophorin A (MNS blood group)##EU338232|GYPA|2993|glycophorin A (MNS blood group)##EU338233|GYPA|2993|glycophorin A (MNS blood group)##EU338234|GYPA|2993|glycophorin A (MNS blood group)##L31860|GYPA|2993|glycophorin A (MNS blood group)##X08054|GYPA|2993|glycophorin A (MNS blood group)##BC005319|GYPA|2993|glycophorin A (MNS blood group)##AK290561|GYPA|2993|glycophorin A (MNS blood group)##NM_002099|GYPA|2993|glycophorin A (MNS blood group)##AY509882|GYPB|2994|glycophorin B (MNS blood group)##AY509883|GYPB|2994|glycophorin B (MNS blood group)##AY950609|GYPB|2994|glycophorin B (MNS blood group)##AY950610|GYPB|2994|glycophorin B (MNS blood group)##AY950611|GYPB|2994|glycophorin B (MNS blood group)##U05255|GYPB|2994|glycophorin B (MNS blood group)##J02982|GYPB|2994|glycophorin B (MNS blood group)##BC121077|GYPB|2994|glycophorin B (MNS blood group)##BC121078|GYPB|2994|glycophorin B (MNS blood group)##EU338223|GYPB|2994|glycophorin B (MNS blood group)##EU338224|GYPB|2994|glycophorin B (MNS blood group)##EU338225|GYPB|2994|glycophorin B (MNS blood group)##EU338226|GYPB|2994|glycophorin B (MNS blood group)##EU338227|GYPB|2994|glycophorin B (MNS blood group)##EU338228|GYPB|2994|glycophorin B (MNS blood group)##EU338229|GYPB|2994|glycophorin B (MNS blood group)##EU338230|GYPB|2994|glycophorin B (MNS blood group)##EU338235|GYPB|2994|glycophorin B (MNS blood group)##EU338236|GYPB|2994|glycophorin B (MNS blood group)##EU338237|GYPB|2994|glycophorin B (MNS blood group)##EU338238|GYPB|2994|glycophorin B (MNS blood group)##BC069310|GYPB|2994|glycophorin B (MNS blood group)##X08055|GYPB|2994|glycophorin B (MNS blood group)##NM_002100|GYPB|2994|glycophorin B (MNS blood group)##EU176664|GYPE|2996|glycophorin E (MNS blood group)##BC064396|GYPE|2996|glycophorin E (MNS blood group)##BC017864|GYPE|2996|glycophorin E (MNS blood group)##M29610|GYPE|2996|glycophorin E (MNS blood group)##NM_002102|GYPE|2996|glycophorin E (MNS blood group)##NM_198682|GYPE|2996|glycophorin E (MNS blood group)##NM_022475|HHIP|64399|hedgehog interacting protein##AY009951|HHIP|64399|hedgehog interacting protein##AY009317|HHIP|64399|hedgehog interacting protein##BC025311|HHIP|64399|hedgehog interacting protein##BC015636|HHIP|64399|hedgehog interacting protein##BC009298|HHIP|64399|hedgehog interacting protein##NM_001040876|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##NM_002940|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##AF132794|ANAPC10|10393|anaphase promoting complex subunit 10##AL080090|ANAPC10|10393|anaphase promoting complex subunit 10##BC005217|ANAPC10|10393|anaphase promoting complex subunit 10##AB012109|ANAPC10|10393|anaphase promoting complex subunit 10##NM_014885|ANAPC10|10393|anaphase promoting complex subunit 10	0.904658	CTCF.p2:-6:0.905
chr6	155026750	155026861	reg1021756.p1	6.558	+	D28359 TSC_hg19_v1_chr6_+_154897429	-129375	+	TSC_hg19_v1_chr6_-_154831788 AK055911	-195003	-	TSC_hg19_v1_chr6_-_154831721 AY328891 AY328892 AY328893 NM_173515	-195070	-	BC070071 NM_014892 TSC_hg19_v1_chr6_+_155054540 AK302969	27720	+	AK295651 AK303001 AK307815 TSC_hg19_v1_chr6_+_155054549 BC032728	27749	+	TSC_hg19_v1_chr6_+_155054812 AB029039	28020	+	AK055911|CNKSR3|154043|CNKSR family member 3##AY328891|CNKSR3|154043|CNKSR family member 3##AY328892|CNKSR3|154043|CNKSR family member 3##AY328893|CNKSR3|154043|CNKSR family member 3##NM_173515|CNKSR3|154043|CNKSR family member 3##BC070071|SCAF8|22828|SR-related CTD-associated factor 8##NM_014892|SCAF8|22828|SR-related CTD-associated factor 8##AK302969|SCAF8|22828|SR-related CTD-associated factor 8##AK295651|SCAF8|22828|SR-related CTD-associated factor 8##AK303001|SCAF8|22828|SR-related CTD-associated factor 8##AK307815|SCAF8|22828|SR-related CTD-associated factor 8##BC032728|SCAF8|22828|SR-related CTD-associated factor 8##AB029039|SCAF8|22828|SR-related CTD-associated factor 8	0.0	
chr15	38364790	38364897	reg1021000.p1	6.557	+	BC029221 NM_152453	-137387	+	TSC_hg19_v1_chr15_-_37393466 BC050431 NM_001220482 NM_002399 BC001516 BC001844 BC007202 AK300247	-971401	-	TSC_hg19_v1_chr15_-_37392751 AK056216 NM_170674 NM_170675 NM_170676 NM_170677	-972287	-	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	179552	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	180179	+	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	381502	+	BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##BC050431|MEIS2|4212|Meis homeobox 2##NM_001220482|MEIS2|4212|Meis homeobox 2##NM_002399|MEIS2|4212|Meis homeobox 2##BC001516|MEIS2|4212|Meis homeobox 2##BC001844|MEIS2|4212|Meis homeobox 2##BC007202|MEIS2|4212|Meis homeobox 2##AK300247|MEIS2|4212|Meis homeobox 2##AK056216|MEIS2|4212|Meis homeobox 2##NM_170674|MEIS2|4212|Meis homeobox 2##NM_170675|MEIS2|4212|Meis homeobox 2##NM_170676|MEIS2|4212|Meis homeobox 2##NM_170677|MEIS2|4212|Meis homeobox 2##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B	0.0	
chr6	111320964	111321111	reg1023301.p1	6.557	+	AK292165 TSC_hg19_v1_chr6_+_111303240 AK024740 AK301662 AL833613 BC005347 BC035314 NM_032194 CU690066	-17763	+	BC011593 TSC_hg19_v1_chr6_+_111279945 AK057977 EF137904	-41079	+	AF361492 AF361496 NM_138408 BC104655 TSC_hg19_v1_chr6_+_111279890	-41207	+	TSC_hg19_v1_chr6_+_111408673 AK126183 BC034031	87639	+	AB057445 NM_018593 BC066985 TSC_hg19_v1_chr6_+_111408810	87758	+	NM_153369 TSC_hg19_v1_chr6_+_111580541 AK093136 AX747946 AK292735 AK315016	259486	+	AK292165|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK024740|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK301662|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AL833613|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC005347|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC035314|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##NM_032194|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC011593|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AK057977|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##EF137904|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AK126183|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC034031|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##AB057445|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##NM_018593|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC066985|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##NM_153369|KIAA1919|91749|KIAA1919##AK093136|KIAA1919|91749|KIAA1919##AK292735|KIAA1919|91749|KIAA1919##AK315016|KIAA1919|91749|KIAA1919	1.028895	CTCF.p2:14:0.967
chr16	21012755	21012871	reg1021663.p1	6.556	+	TSC_hg19_v1_chr16_+_20912407 BC017039	-100405	+	AK311415 NM_001128301 NM_001128302 TSC_hg19_v1_chr16_+_20912121 AK311881	-100692	+	BX648998 NM_173475 TSC_hg19_v1_chr16_-_20911681 BC040442 BX648185	-101163	-	NM_020422 TSC_hg19_v1_chr16_+_21169994 AK074667 AK293557 BC015812	157169	+	AF494040 NM_017539	157948	-	BC096304 BC096305 BC096306 BC096307 M90366 NM_003460 AK313003 AK293805 AK308820	210067	-	BC017039|LYRM1|57149|LYR motif containing 1##AK311415|LYRM1|57149|LYR motif containing 1##NM_001128301|LYRM1|57149|LYR motif containing 1##NM_001128302|LYRM1|57149|LYR motif containing 1##AK311881|LYRM1|57149|LYR motif containing 1##BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_020422|TMEM159|57146|transmembrane protein 159##AK074667|TMEM159|57146|transmembrane protein 159##AK293557|TMEM159|57146|transmembrane protein 159##BC015812|TMEM159|57146|transmembrane protein 159##AF494040|DNAH3|55567|dynein, axonemal, heavy chain 3##NM_017539|DNAH3|55567|dynein, axonemal, heavy chain 3##BC096304|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096305|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096306|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096307|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##M90366|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##NM_003460|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK313003|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK293805|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK308820|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)	0.0	
chr6	331880	332060	reg1021915.p2	6.556	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-39473	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-39885	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	59794	+	AF508547 BC101697 BC101699 NM_148959	324983	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	361120	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chr10	125332883	125332972	reg1020716.p2	6.555	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-418571	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-418981	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-419029	+	AJ505757 NM_153442 BC112011 BC113462	92950	+	BC137492 BC146862 AY358565 NM_198148	318569	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	518972	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.999189	CTCF.p2:-5:0.999
chr1	212872708	212872822	reg1020130.p2	6.555	+	AK301981 NM_153606 BC035007	-74964	+	NM_001206486 AB066566 AB078026 AB078027 AB528347 AY313926 AY313927 BT006996 CR450334 DQ892723 DQ895972 AB209032	-84358	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	-90658	+	AB463432 HQ258061 TSC_hg19_v1_chr1_-_212873132	355	-	TSC_hg19_v1_chr1_-_212873221 BC117489 BC117491	465	-	TSC_hg19_v1_chr1_-_212873317 AF255346 NM_018664	555	-	AK301981|FAM71A|149647|family with sequence similarity 71, member A##NM_153606|FAM71A|149647|family with sequence similarity 71, member A##BC035007|FAM71A|149647|family with sequence similarity 71, member A##NM_001206486|ATF3|467|activating transcription factor 3##AB066566|ATF3|467|activating transcription factor 3##AB078026|ATF3|467|activating transcription factor 3##AB078027|ATF3|467|activating transcription factor 3##AY313926|ATF3|467|activating transcription factor 3##AY313927|ATF3|467|activating transcription factor 3##BT006996|ATF3|467|activating transcription factor 3##CR450334|ATF3|467|activating transcription factor 3##DQ892723|ATF3|467|activating transcription factor 3##DQ895972|ATF3|467|activating transcription factor 3##AB209032|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3##HQ258061|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117489|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117491|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##AF255346|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##NM_018664|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3	0.620768	CTCF.p2:5:0.594
chr16	1588902	1589021	reg1020252.p2	6.555	+	BC105785 AY358178 NM_024600	-4766	+	TSC_hg19_v1_chr16_+_1583666 BC020425	-5265	+	AK024551 AY676494 TSC_hg19_v1_chr16_+_1583663	-5301	+	TSC_hg19_v1_chr16_-_1660720 AB011162 AK299035 AK299115	71731	-	TSC_hg19_v1_chr16_-_1662054 NM_014714	73077	-	NM_020825	75679	+	BC105785|TMEM204|79652|transmembrane protein 204##AY358178|TMEM204|79652|transmembrane protein 204##NM_024600|TMEM204|79652|transmembrane protein 204##BC020425|TMEM204|79652|transmembrane protein 204##AK024551|TMEM204|79652|transmembrane protein 204##AY676494|TMEM204|79652|transmembrane protein 204##AB011162|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##AK299035|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##AK299115|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##NM_014714|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##NM_020825|CRAMP1L|57585|Crm, cramped-like (Drosophila)	0.014268	
chr8	104219670	104219801	reg1023722.p1	6.555	+	TSC_hg19_v1_chr8_+_104152984 NM_001024372 NM_024812 BC035038 AK022077 BC011517 AK093819 AF371319 AF371323 DQ893318 DQ896633	-66735	+	TSC_hg19_v1_chr8_+_104033310 AK308632 BC010960 X69151 AK000064	-186415	+	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	-186468	+	NM_001164615 BX640609 AK313789	90939	+	NM_001164616 NM_003506 TSC_hg19_v1_chr8_+_104311103 AK299341 AK296824 BC060836 BC036106 AB012911 AK304092 AK316544	91356	+	TSC_hg19_v1_chr8_+_104383774 AK130063 BC021025 AY358914 AK300273	164005	+	NM_001024372|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_024812|BAALC|79870|brain and acute leukemia, cytoplasmic##BC035038|BAALC|79870|brain and acute leukemia, cytoplasmic##AK022077|BAALC|79870|brain and acute leukemia, cytoplasmic##BC011517|BAALC|79870|brain and acute leukemia, cytoplasmic##AK093819|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371319|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371323|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ893318|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ896633|BAALC|79870|brain and acute leukemia, cytoplasmic##AK308632|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC010960|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##X69151|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK000064|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##NM_001164615|FZD6|8323|frizzled family receptor 6##BX640609|FZD6|8323|frizzled family receptor 6##AK313789|FZD6|8323|frizzled family receptor 6##NM_001164616|FZD6|8323|frizzled family receptor 6##NM_003506|FZD6|8323|frizzled family receptor 6##AK299341|FZD6|8323|frizzled family receptor 6##AK296824|FZD6|8323|frizzled family receptor 6##BC060836|FZD6|8323|frizzled family receptor 6##BC036106|FZD6|8323|frizzled family receptor 6##AB012911|FZD6|8323|frizzled family receptor 6##AK304092|FZD6|8323|frizzled family receptor 6##AK316544|FZD6|8323|frizzled family receptor 6##AK130063|CTHRC1|115908|collagen triple helix repeat containing 1##BC021025|CTHRC1|115908|collagen triple helix repeat containing 1##AY358914|CTHRC1|115908|collagen triple helix repeat containing 1##AK300273|CTHRC1|115908|collagen triple helix repeat containing 1	0.947962	CTCF.p2:11:0.948
chr2	180286923	180287008	reg1018242.p1	6.554	+	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	-157560	-	AL832777 NM_173648	-372180	-	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-614862	-	AK057999 NM_001113398	140349	-	AK096822 NM_001113397	323803	-	TSC_hg19_v1_chr2_-_180726048 AK131432 BC033042	439082	-	AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B##AK096822|ZNF385B|151126|zinc finger protein 385B##NM_001113397|ZNF385B|151126|zinc finger protein 385B##AK131432|ZNF385B|151126|zinc finger protein 385B##BC033042|ZNF385B|151126|zinc finger protein 385B	1.137082	CTCF.p2:-6:0.999
chr8	41833106	41833205	reg1021111.p1	6.554	+	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-78845	-	AK026601 TSC_hg19_v1_chr8_+_41685847	-147330	+	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	-178015	-	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	76344	-	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	177378	+	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	231933	-	AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic##U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue	0.213632	CTCF.p2:22:0.214
chr1	159791416	159791525	reg1019810.p2	6.553	+	NM_001004310 AY212514 AY654627 AY654628 AY513661	-19277	+	TSC_hg19_v1_chr1_+_159750758 AK000449 NM_017823 BC001140 AB164404 AF086553	-40596	+	M35163 BC125135 X56214 X56692 AK289443 AK313624 BC020766 BC070257 NM_000567	-107144	-	NM_020125 TSC_hg19_v1_chr1_+_159796486	5013	+	TSC_hg19_v1_chr1_+_159796539 AK074669 AF146761	5108	+	TSC_hg19_v1_chr1_+_159796662 BC109194	5199	+	NM_001004310|FCRL6|343413|Fc receptor-like 6##AY212514|FCRL6|343413|Fc receptor-like 6##AY654627|FCRL6|343413|Fc receptor-like 6##AY654628|FCRL6|343413|Fc receptor-like 6##AY513661|FCRL6|343413|Fc receptor-like 6##AK000449|DUSP23|54935|dual specificity phosphatase 23##NM_017823|DUSP23|54935|dual specificity phosphatase 23##BC001140|DUSP23|54935|dual specificity phosphatase 23##AB164404|DUSP23|54935|dual specificity phosphatase 23##AF086553|DUSP23|54935|dual specificity phosphatase 23##M35163|CRP|1401|C-reactive protein, pentraxin-related##BC125135|CRP|1401|C-reactive protein, pentraxin-related##X56214|CRP|1401|C-reactive protein, pentraxin-related##X56692|CRP|1401|C-reactive protein, pentraxin-related##AK289443|CRP|1401|C-reactive protein, pentraxin-related##AK313624|CRP|1401|C-reactive protein, pentraxin-related##BC020766|CRP|1401|C-reactive protein, pentraxin-related##BC070257|CRP|1401|C-reactive protein, pentraxin-related##NM_000567|CRP|1401|C-reactive protein, pentraxin-related##NM_020125|SLAMF8|56833|SLAM family member 8##AK074669|SLAMF8|56833|SLAM family member 8##AF146761|SLAMF8|56833|SLAM family member 8##BC109194|SLAMF8|56833|SLAM family member 8	0.821971	CTCF.p2:-3:0.822
chr17	18223293	18223407	reg1021989.p1	6.553	+	TSC_hg19_v1_chr17_+_18218610 BC142680 AF467440 BC001018 BC005067 BC014179 BC101115 BC101116 BC101117	-4687	+	TSC_hg19_v1_chr17_+_18218606 AK296847	-4744	+	TSC_hg19_v1_chr17_+_18218603 NM_144775	-4764	+	TSC_hg19_v1_chr17_-_18266810 BC007979 BC022874 BC038598 AK223552 AK298415 AK302834 AF017065 NM_004169 NM_148918	43434	-	BC036791 NM_001145127 AK298286 BC026998	57737	+	AK296659 NM_001040078 AK315818 BC073889 BC105943 TSC_hg19_v1_chr17_+_18380141 CU687266	156782	+	BC142680|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##AF467440|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC001018|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC005067|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC014179|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC101115|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC101116|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC101117|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##AK296847|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##NM_144775|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC007979|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC022874|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC038598|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK223552|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK298415|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK302834|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AF017065|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_004169|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_148918|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC036791|EVPLL|645027|envoplakin-like##NM_001145127|EVPLL|645027|envoplakin-like##AK298286|EVPLL|645027|envoplakin-like##BC026998|EVPLL|645027|envoplakin-like##AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001040078|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##AK315818|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC073889|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B	0.320433	CTCF.p2:-11:0.320
chr1	99214859	99214973	reg1020258.p2	6.553	+	TSC_hg19_v1_chr1_+_99127278 NM_015976 NM_152238 AK025031 AK223229 AL049989 AF121857 AK298211 BC018105 BC010349	-87608	+	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	-828310	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	-828357	-	BC040174 AK295688 BC140086 BC143086 AY634620 BC136350 BC144000 AY574039 FJ472844 NM_001010861 NM_001037317	255396	-	AF541281 NM_001166252 NM_014839 AB007924 AK056665 AY304518 AB384482 BC042963 TSC_hg19_v1_chr1_+_99730047 AK291369 AK297417	515034	+	TSC_hg19_v1_chr1_+_99730067 AF357013 AK300361	515169	+	NM_015976|SNX7|51375|sorting nexin 7##NM_152238|SNX7|51375|sorting nexin 7##AK025031|SNX7|51375|sorting nexin 7##AK223229|SNX7|51375|sorting nexin 7##AL049989|SNX7|51375|sorting nexin 7##AF121857|SNX7|51375|sorting nexin 7##AK298211|SNX7|51375|sorting nexin 7##BC018105|SNX7|51375|sorting nexin 7##BC010349|SNX7|51375|sorting nexin 7##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##BC040174|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AK295688|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC140086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC143086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY634620|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC136350|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC144000|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY574039|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##FJ472844|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001010861|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001037317|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AF357013|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK300361|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	0.56261	CTCF.p2:-21:0.563
chr6	94133446	94133560	reg1023173.p1	6.553	+	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	-4320	-	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-2836665	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-2836820	-	TSC_hg19_v1_chr6_-_96025325 BC047582	1891786	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	1891898	+	NM_006581 AK314966 TSC_hg19_v1_chr6_+_96463867 BC001879 BC036101 AB023021	2330364	+	BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha##NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	0.999428	CTCF.p2:3:0.999
chr10	53653163	53653302	reg1022526.p2	6.552	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-193885	-	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-818941	+	TSC_hg19_v1_chr10_+_52751129 D45864	-902111	+	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	420883	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	878194	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2907766	-	AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##D45864|PRKG1|5592|protein kinase, cGMP-dependent, type I##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15	0.0	
chr22	33606265	33606385	reg1019006.p1	6.552	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-151970	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-203599	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-408573	+	AJ007583 AB011181 NM_004737 NM_133642	710045	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1855824	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	2047151	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.80302	CTCF.p2:-12:0.803
chr9	131017621	131017762	reg1025062.p1	6.552	+	TSC_hg19_v1_chr9_-_130966499 AK023978 NM_001131015 NM_012127	-51117	-	TSC_hg19_v1_chr9_+_130965688 L07807 BC063850 AK225179	-51973	+	AK296326 TSC_hg19_v1_chr9_+_130965667	-52025	+	TSC_hg19_v1_chr9_-_131038221 BX647920 AF248953 CU686726 BC069268 NM_004486	20576	-	TSC_hg19_v1_chr9_+_131038421 DQ414820 NM_001040011	20731	+	BC029911 AK311408 TSC_hg19_v1_chr9_+_131038571	20844	+	AK023978|CIZ1|25792|CDKN1A interacting zinc finger protein 1##NM_001131015|CIZ1|25792|CDKN1A interacting zinc finger protein 1##NM_012127|CIZ1|25792|CDKN1A interacting zinc finger protein 1##L07807|DNM1|1759|dynamin 1##BC063850|DNM1|1759|dynamin 1##AK225179|DNM1|1759|dynamin 1##AK296326|DNM1|1759|dynamin 1##BX647920|GOLGA2|2801|golgin A2##AF248953|GOLGA2|2801|golgin A2##BC069268|GOLGA2|2801|golgin A2##NM_004486|GOLGA2|2801|golgin A2##DQ414820|SWI5|375757|SWI5 recombination repair homolog (yeast)##NM_001040011|SWI5|375757|SWI5 recombination repair homolog (yeast)##BC029911|SWI5|375757|SWI5 recombination repair homolog (yeast)##AK311408|SWI5|375757|SWI5 recombination repair homolog (yeast)	0.999101	CTCF.p2:7:0.999
chr11	2019692	2019785	reg1008643.p1	6.551	+	TSC_hg19_v1_chr11_-_2019073 AK056774 AK092486 AK309887 AK311497	-667	-	BC040073 TSC_hg19_v1_chr11_-_2019016	-727	-	BC002550 TSC_hg19_v1_chr11_-_2018986 BC040852	-798	-	TSC_hg19_v1_chr11_-_2152963 AF318382	133224	-	TSC_hg19_v1_chr11_-_2156727 AB528666 BT007013 CU674260 DQ892721 DQ895970	136998	-	S51971 TSC_hg19_v1_chr11_-_2158501	138766	-	AK056774|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AK092486|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC040073|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC002550|RPS12|6206|ribosomal protein S12##BC040852|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AF318382|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##BT007013|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ892721|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ895970|IGF2|3481|insulin-like growth factor 2 (somatomedin A)	0.052289	
chr13	41628478	41628628	reg1023331.p1	6.551	+	TSC_hg19_v1_chr13_-_41593499 NM_172373	-35054	-	TSC_hg19_v1_chr13_-_41593453 M82882	-35110	-	AK304289 BC010575 BC030507 NM_001145353	-72165	-	BX640798 TSC_hg19_v1_chr13_-_41635093	6532	-	TSC_hg19_v1_chr13_+_41635650 AK000979 AK314525 AK001557 AK297536 BC108310 NM_007187 BC104879	7134	+	AL833839 EU832523 EU832605 BC051349 TSC_hg19_v1_chr13_-_41706883 BC000560 AK056633 AK299627 AK096608 NM_152903	78242	-	NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##M82882|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##AK304289|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##BC010575|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##BC030507|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##NM_001145353|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##BX640798|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##AK000979|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##AK314525|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##AK001557|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##AK297536|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##BC108310|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##NM_007187|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##BC104879|WBP4|11193|WW domain binding protein 4 (formin binding protein 21)##AL833839|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##EU832523|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##EU832605|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##BC051349|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##BC000560|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##AK056633|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##AK299627|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##AK096608|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6##NM_152903|KBTBD6|89890|kelch repeat and BTB (POZ) domain containing 6	0.949112	CTCF.p2:-6:0.949
chr8	71859175	71859317	reg1024617.p1	6.551	+	AY534247 BC111381 NM_001011720 BC151845 BC137104 BC137105	-277606	+	TSC_hg19_v1_chr8_-_71581419 BC000878 BC008505 NM_016027	-277797	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	-277862	-	AF467247 BC121798 BC121799 AJ000097 NM_172058 NM_172059 NM_172060	409603	-	AK127798 AK295897 TSC_hg19_v1_chr8_-_72274006	414739	-	TSC_hg19_v1_chr8_-_72274302 AK307379	415047	-	AY534247|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC111381|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##NM_001011720|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC151845|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137104|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137105|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC000878|LACTB2|51110|lactamase, beta 2##BC008505|LACTB2|51110|lactamase, beta 2##NM_016027|LACTB2|51110|lactamase, beta 2##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2##AF467247|EYA1|2138|eyes absent homolog 1 (Drosophila)##BC121798|EYA1|2138|eyes absent homolog 1 (Drosophila)##BC121799|EYA1|2138|eyes absent homolog 1 (Drosophila)##AJ000097|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172058|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172059|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_172060|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK127798|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK295897|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)	0.976895	CTCF.p2:-14:0.977
chr11	61395754	61395860	reg1021159.p1	6.550	+	TSC_hg19_v1_chr11_-_61348549 BC125170 BC125171 NM_001252065 NM_004200	-47280	-	NM_001145077	-119536	+	NM_001170753 NM_145017 TSC_hg19_v1_chr11_+_61248591 AK057333 BC043246 JF442033	-147189	+	TSC_hg19_v1_chr11_+_61447896 BC150176 BC150195 NM_006133 AB014559 BC152453	52074	+	TSC_hg19_v1_chr11_+_61520107 AB023171 NM_001127392 AB385408	124300	+	AF086762 NM_013279	127053	+	BC125170|SYT7|9066|synaptotagmin VII##BC125171|SYT7|9066|synaptotagmin VII##NM_001252065|SYT7|9066|synaptotagmin VII##NM_004200|SYT7|9066|synaptotagmin VII##NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B##NM_001170753|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##NM_145017|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##AK057333|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##BC043246|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##JF442033|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##BC150176|DAGLA|747|diacylglycerol lipase, alpha##BC150195|DAGLA|747|diacylglycerol lipase, alpha##NM_006133|DAGLA|747|diacylglycerol lipase, alpha##AB014559|DAGLA|747|diacylglycerol lipase, alpha##BC152453|DAGLA|747|diacylglycerol lipase, alpha##AB023171|C11orf9|745|chromosome 11 open reading frame 9##NM_001127392|C11orf9|745|chromosome 11 open reading frame 9##AF086762|C11orf9|745|chromosome 11 open reading frame 9##NM_013279|C11orf9|745|chromosome 11 open reading frame 9	0.301247	CTCF.p2:-11:0.301
chr12	103096448	103096565	reg1021293.p1	6.550	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-222124	-	M11568 TSC_hg19_v1_chr12_-_102874344	-222164	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-222184	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	214460	-	TSC_hg19_v1_chr12_-_103311062 BC026251	214557	-	L47726 NM_000277 U49897	214874	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.978256	CTCF.p2:-3:0.978
chr20	49942887	49943038	reg1024795.p1	6.550	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	-303305	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-367594	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-367899	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	216177	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	216313	-	EU887574 EU887577 NM_001136021	236205	-	BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.997761	CTCF.p2:7:0.998
chr3	128336652	128336779	reg1013032.p2	6.550	+	AF008192 NM_007354	-41787	-	BC051342 BC002557 NM_032638 BX647499 TSC_hg19_v1_chr3_-_128212044	-124679	-	TSC_hg19_v1_chr3_-_128207374 AK314826 NM_001145661	-129345	-	BC007995 TSC_hg19_v1_chr3_-_128369648 CR456742 AB527671 CU679817	32871	-	TSC_hg19_v1_chr3_-_128369662 AK297941 AK312369 AK296905 CR749284 BC010839 AK223595	32967	-	TSC_hg19_v1_chr3_-_128369724 NM_002950	33023	-	AF008192|C3orf27|23434|chromosome 3 open reading frame 27##NM_007354|C3orf27|23434|chromosome 3 open reading frame 27##BC051342|GATA2|2624|GATA binding protein 2##BC002557|GATA2|2624|GATA binding protein 2##NM_032638|GATA2|2624|GATA binding protein 2##BX647499|GATA2|2624|GATA binding protein 2##AK314826|GATA2|2624|GATA binding protein 2##NM_001145661|GATA2|2624|GATA binding protein 2##BC007995|RPN1|6184|ribophorin I##CR456742|RPN1|6184|ribophorin I##AK297941|RPN1|6184|ribophorin I##AK312369|RPN1|6184|ribophorin I##AK296905|RPN1|6184|ribophorin I##CR749284|RPN1|6184|ribophorin I##BC010839|RPN1|6184|ribophorin I##AK223595|RPN1|6184|ribophorin I##NM_002950|RPN1|6184|ribophorin I	1.021772	CTCF.p2:-19:0.994
chr12	75784912	75785028	reg1021623.p1	6.549	+	TSC_hg19_v1_chr12_+_75784878 BX640916 BC029557 NM_152436 DQ891533 DQ894722	-85	+	BC016749 AK093175 AX747973 TSC_hg19_v1_chr12_+_75784869	-111	+	AY358731 BC014603 NM_152779 DQ894020 EU176187 CU677065	-56508	+	NM_006851 TSC_hg19_v1_chr12_+_75874534 AK304847 X91911 BC005227 U16307 BC012510 AF400440 AK313449 CU680346 AB529136 EF667354	89616	+	CU689792 DQ893552 DQ893553 DQ893554 DQ896515 EF010919 TSC_hg19_v1_chr12_-_75905381 AK297602 AK313687	120408	-	AK022133 TSC_hg19_v1_chr12_-_75905382 BC016778 U55766	120415	-	BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##NM_006851|GLIPR1|11010|GLI pathogenesis-related 1##AK304847|GLIPR1|11010|GLI pathogenesis-related 1##X91911|GLIPR1|11010|GLI pathogenesis-related 1##BC005227|GLIPR1|11010|GLI pathogenesis-related 1##U16307|GLIPR1|11010|GLI pathogenesis-related 1##BC012510|GLIPR1|11010|GLI pathogenesis-related 1##AF400440|GLIPR1|11010|GLI pathogenesis-related 1##AK313449|GLIPR1|11010|GLI pathogenesis-related 1##EF667354|GLIPR1|11010|GLI pathogenesis-related 1##DQ893552|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ893553|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ893554|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ896515|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##EF010919|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK297602|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK313687|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK022133|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC016778|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##U55766|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)	0.019599	
chr10	126336461	126336591	reg1022616.p1	6.548	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-186105	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-197949	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-229008	-	D50930 TSC_hg19_v1_chr10_-_126432660	96118	-	TSC_hg19_v1_chr10_-_126432823 BC031654	96290	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	96385	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.91332	CTCF.p2:-18:0.913
chr6	84937761	84937914	reg1020831.p2	6.548	+	AB023226 AK308190 BC063632 NM_014895 TSC_hg19_v1_chr6_-_84937334	-513	-	TSC_hg19_v1_chr6_+_84743459 AK090775 AX746611 NM_138409 BC010003 AK307078 AK292736 BC039855	-194431	+	TSC_hg19_v1_chr6_+_84569438 AB527313 AM393033	-368373	+	TSC_hg19_v1_chr6_-_85472330 AJ010278	534488	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	535333	-	HQ258462 NM_001080508 BC157841 BC132715	536088	-	AB023226|KIAA1009|22832|KIAA1009##AK308190|KIAA1009|22832|KIAA1009##BC063632|KIAA1009|22832|KIAA1009##NM_014895|KIAA1009|22832|KIAA1009##AK090775|MRAP2|112609|melanocortin 2 receptor accessory protein 2##NM_138409|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC010003|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK307078|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK292736|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC039855|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AM393033|CYB5R4|51167|cytochrome b5 reductase 4##AJ010278|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18##HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18	0.968773	CTCF.p2:35:0.969
chr13	74342009	74342120	reg1020461.p2	6.547	+	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-708860	+	TSC_hg19_v1_chr13_+_73356270 NM_006346 AK309828 BC006009 BC008432 BC041806 BC051911 AY370776 AY375528	-985754	+	BC056143 TSC_hg19_v1_chr13_-_73356083 AK314715 BC038101 NM_001128226 NM_014953	-985858	-	AF161471 AF113122 NM_007249	365925	-	TSC_hg19_v1_chr13_-_74708425 AK291397	366332	-	CR749622 TSC_hg19_v1_chr13_-_75901948	1559858	-	AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_006346|PIBF1|10464|progesterone immunomodulatory binding factor 1##AK309828|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC006009|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC008432|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC041806|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC051911|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY370776|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY375528|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC056143|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AK314715|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##BC038101|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_001128226|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_014953|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK291397|KLF12|11278|Kruppel-like factor 12##CR749622|TBC1D4|9882|TBC1 domain family, member 4	0.925907	CTCF.p2:-14:0.926
chr18	77723160	77723289	reg1020695.p1	6.547	+	AK301881 NM_001146343 NM_001146345 NM_025078 TSC_hg19_v1_chr18_-_77711653	-11572	-	TSC_hg19_v1_chr18_-_77711643 BC030140	-11598	-	TSC_hg19_v1_chr18_+_77659453 BC169279	-63763	+	TSC_hg19_v1_chr18_+_77724644 NM_001136180 BC040056 BC017654 BC157848	1399	+	AF146373 AB528659 AK309098 TSC_hg19_v1_chr18_-_77748548 AF023611 AF023612 BC001046 BC019272 NM_006701 AK314901	25246	-	AK308703 TSC_hg19_v1_chr18_-_77793959	70712	-	AK301881|PQLC1|80148|PQ loop repeat containing 1##NM_001146343|PQLC1|80148|PQ loop repeat containing 1##NM_001146345|PQLC1|80148|PQ loop repeat containing 1##NM_025078|PQLC1|80148|PQ loop repeat containing 1##BC030140|PQLC1|80148|PQ loop repeat containing 1##NM_001136180|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC040056|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC017654|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC157848|HSBP1L1|440498|heat shock factor binding protein 1-like 1##AF146373|TXNL4A|10907|thioredoxin-like 4A##AK309098|TXNL4A|10907|thioredoxin-like 4A##AF023611|TXNL4A|10907|thioredoxin-like 4A##AF023612|TXNL4A|10907|thioredoxin-like 4A##BC001046|TXNL4A|10907|thioredoxin-like 4A##BC019272|TXNL4A|10907|thioredoxin-like 4A##NM_006701|TXNL4A|10907|thioredoxin-like 4A##AK314901|TXNL4A|10907|thioredoxin-like 4A	0.0	
chr2	197978291	197978472	reg1005096.p2	6.547	+	AB128038 AB527353 TSC_hg19_v1_chr2_-_197791382 BX648642 AK022439 NM_024989 BC040517	-186937	-	BC137150 BC137151 AY358249 NM_213608	-303444	-	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	-313968	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	197001	-	TSC_hg19_v1_chr2_-_198175459 BC063622	197092	-	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	197138	-	AB128038|PGAP1|80055|post-GPI attachment to proteins 1##BX648642|PGAP1|80055|post-GPI attachment to proteins 1##AK022439|PGAP1|80055|post-GPI attachment to proteins 1##NM_024989|PGAP1|80055|post-GPI attachment to proteins 1##BC040517|PGAP1|80055|post-GPI attachment to proteins 1##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK124039|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44	0.0	
chr22	38968254	38968380	reg1018005.p1	6.547	+	D64108 CR456486 D63882 BC125163 BC125164 TSC_hg19_v1_chr22_-_38966189 BC035658 NM_007068 AK292617	-2163	-	NM_001098504 NM_006386 TSC_hg19_v1_chr22_-_38902346	-65867	-	BC029553 TSC_hg19_v1_chr22_-_38902315	-66002	-	TSC_hg19_v1_chr22_-_39052371 AK301819	84046	-	TSC_hg19_v1_chr22_-_39052579 NM_001013647	84289	-	TSC_hg19_v1_chr22_+_39052648 AK307265 AK311928 NM_001002880 NM_015373	84331	+	D64108|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##CR456486|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##D63882|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##BC125163|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##BC125164|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##BC035658|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##NM_007068|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##AK292617|DMC1|11144|DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)##NM_001098504|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##NM_006386|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##BC029553|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AK301819|LOC646851|646851|putative uncharacterized protein LOC388900##NM_001013647|LOC646851|646851|putative uncharacterized protein LOC388900##AK307265|CBY1|25776|chibby homolog 1 (Drosophila)##AK311928|CBY1|25776|chibby homolog 1 (Drosophila)##NM_001002880|CBY1|25776|chibby homolog 1 (Drosophila)##NM_015373|CBY1|25776|chibby homolog 1 (Drosophila)	0.0	
chr11	112985318	112985428	reg1021734.p1	6.546	+	TSC_hg19_v1_chr11_+_112832281 U63041 AK292453	-153067	+	X16841 TSC_hg19_v1_chr11_+_112832212	-153167	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	-153242	+	NM_017868 AK023921 TSC_hg19_v1_chr11_+_113185315 AK292331 AK091887 BC011546 BC019086 BC032355	199917	+	AJ541797 NM_178510 AF487542	273186	+	S69899 BC021195 NM_000795 NM_016574 M30625	360602	-	U63041|NCAM1|4684|neural cell adhesion molecule 1##AK292453|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##NM_017868|TTC12|54970|tetratricopeptide repeat domain 12##AK023921|TTC12|54970|tetratricopeptide repeat domain 12##AK292331|TTC12|54970|tetratricopeptide repeat domain 12##AK091887|TTC12|54970|tetratricopeptide repeat domain 12##BC011546|TTC12|54970|tetratricopeptide repeat domain 12##BC019086|TTC12|54970|tetratricopeptide repeat domain 12##BC032355|TTC12|54970|tetratricopeptide repeat domain 12##AJ541797|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_178510|ANKK1|255239|ankyrin repeat and kinase domain containing 1##AF487542|ANKK1|255239|ankyrin repeat and kinase domain containing 1##S69899|DRD2|1813|dopamine receptor D2##BC021195|DRD2|1813|dopamine receptor D2##NM_000795|DRD2|1813|dopamine receptor D2##NM_016574|DRD2|1813|dopamine receptor D2##M30625|DRD2|1813|dopamine receptor D2	0.945417	CTCF.p2:-5:0.945
chr11	14996430	14996551	reg1023970.p1	6.546	+	M26095 X03662 M64486 BC093753 BC101599 BC143562 BC069684 BC069704 BC069760 BC069778 NM_001033952 NM_001033953 NM_001741 X00356	-2670	-	AK054728 TSC_hg19_v1_chr11_+_14926557	-69941	+	AY323817 NM_024514 BC104907 BC104909	-82717	-	BC008428 AK291188 BC092468 NM_000728	98636	+	AB236159 NM_001031853	137479	+	AB236158 NM_001042536	139993	+	M26095|CALCA|796|calcitonin-related polypeptide alpha##X03662|CALCA|796|calcitonin-related polypeptide alpha##M64486|CALCA|796|calcitonin-related polypeptide alpha##BC093753|CALCA|796|calcitonin-related polypeptide alpha##BC101599|CALCA|796|calcitonin-related polypeptide alpha##BC143562|CALCA|796|calcitonin-related polypeptide alpha##BC069684|CALCA|796|calcitonin-related polypeptide alpha##BC069704|CALCA|796|calcitonin-related polypeptide alpha##BC069760|CALCA|796|calcitonin-related polypeptide alpha##BC069778|CALCA|796|calcitonin-related polypeptide alpha##NM_001033952|CALCA|796|calcitonin-related polypeptide alpha##NM_001033953|CALCA|796|calcitonin-related polypeptide alpha##NM_001741|CALCA|796|calcitonin-related polypeptide alpha##X00356|CALCA|796|calcitonin-related polypeptide alpha##AK054728|CALCB|797|calcitonin-related polypeptide beta##AY323817|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##NM_024514|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104907|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104909|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)	0.503064	CTCF.p2:-5:0.503
chr19	42905563	42905687	reg1021677.p1	6.546	+	TSC_hg19_v1_chr19_+_42901325 AK311181	-4313	+	BC101197 BC101198 AB049591 AK312080 NM_032488	-11194	-	AB011541 BC153880 NM_001410 TSC_hg19_v1_chr19_+_42829786	-75839	+	TSC_hg19_v1_chr19_-_42928157 BC029301	22588	-	AK309893 AK292482 BC029961 BC070041 NM_005357 U40002	25913	-	BC093946 BC112095 AK292985 AY358433 NM_198477 AY598464	41499	-	BC101197|CNFN|84518|cornifelin##BC101198|CNFN|84518|cornifelin##AB049591|CNFN|84518|cornifelin##AK312080|CNFN|84518|cornifelin##NM_032488|CNFN|84518|cornifelin##AB011541|MEGF8|1954|multiple EGF-like-domains 8##BC153880|MEGF8|1954|multiple EGF-like-domains 8##NM_001410|MEGF8|1954|multiple EGF-like-domains 8##BC029301|LIPE|3991|lipase, hormone-sensitive##AK292482|LIPE|3991|lipase, hormone-sensitive##BC029961|LIPE|3991|lipase, hormone-sensitive##BC070041|LIPE|3991|lipase, hormone-sensitive##NM_005357|LIPE|3991|lipase, hormone-sensitive##U40002|LIPE|3991|lipase, hormone-sensitive##BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17##BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17##NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17	0.999829	CTCF.p2:1:1.000
chr1	169078561	169078706	reg1016761.p2	6.545	+	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	-2664	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	-380204	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-532841	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	258459	-	NM_003666 AF288161 U79751 AK223533	258590	+	TSC_hg19_v1_chr1_+_169337450 AK307151 AK291725 BC020716	258816	+	AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_003666|BLZF1|8548|basic leucine zipper nuclear factor 1##AF288161|BLZF1|8548|basic leucine zipper nuclear factor 1##U79751|BLZF1|8548|basic leucine zipper nuclear factor 1##AK223533|BLZF1|8548|basic leucine zipper nuclear factor 1##AK307151|BLZF1|8548|basic leucine zipper nuclear factor 1##AK291725|BLZF1|8548|basic leucine zipper nuclear factor 1##BC020716|BLZF1|8548|basic leucine zipper nuclear factor 1	0.0	
chr14	55764725	55764859	reg1022590.p1	6.545	+	NM_152231	-25921	+	TSC_hg19_v1_chr14_+_55738114 BX248268 BC095482	-26634	+	NM_017943 AK092879 AX747787 TSC_hg19_v1_chr14_+_55738097 BC109120 BC109121	-26733	+	BC028015 AB587548 AK292810 TSC_hg19_v1_chr14_-_55878549 BC109089 BC109090 AK131251 NM_014924	113764	-	AY457923 HQ258397 NM_199047 DQ448593 BC117185 BC117159	142505	-	BX248296 TSC_hg19_v1_chr14_-_56046835 AK124927	282024	-	NM_152231|FBXO34|55030|F-box protein 34##BX248268|FBXO34|55030|F-box protein 34##BC095482|FBXO34|55030|F-box protein 34##NM_017943|FBXO34|55030|F-box protein 34##AK092879|FBXO34|55030|F-box protein 34##BC109120|FBXO34|55030|F-box protein 34##BC109121|FBXO34|55030|F-box protein 34##BC028015|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##AK292810|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##BC109089|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##BC109090|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##AK131251|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##NM_014924|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##AY457923|TBPL2|387332|TATA box binding protein like 2##HQ258397|TBPL2|387332|TATA box binding protein like 2##NM_199047|TBPL2|387332|TATA box binding protein like 2##DQ448593|TBPL2|387332|TATA box binding protein like 2##BC117185|TBPL2|387332|TATA box binding protein like 2##BC117159|TBPL2|387332|TATA box binding protein like 2##BX248296|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##AK124927|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)	0.071838	
chr19	49503152	49503265	reg1019504.p1	6.545	+	TSC_hg19_v1_chr19_+_49497154 AK301344 AK027762 AK074542 AB024301 BC004531 BC008355 NM_006666 AF124607 AF151804 AF155138 AM393635 BC000428 Y18417 AK057498 AL136743 AB464184 CU678752 CU678925 DQ891392 DQ894568	-6064	+	BC003182 TSC_hg19_v1_chr19_-_49496567 NM_001161587 NM_002103	-6599	-	TSC_hg19_v1_chr19_-_49496564 AK223579 AK291672 AK294349 AK300369 AK302738 AK303712	-6644	-	NM_000894	17138	-	K03181 BC022796 BC106059 AK291552 NM_000737	24317	-	NM_033378 BC107143 BC069367	31973	+	AK301344|RUVBL2|10856|RuvB-like 2 (E. coli)##AK027762|RUVBL2|10856|RuvB-like 2 (E. coli)##AK074542|RUVBL2|10856|RuvB-like 2 (E. coli)##AB024301|RUVBL2|10856|RuvB-like 2 (E. coli)##BC004531|RUVBL2|10856|RuvB-like 2 (E. coli)##BC008355|RUVBL2|10856|RuvB-like 2 (E. coli)##NM_006666|RUVBL2|10856|RuvB-like 2 (E. coli)##AF124607|RUVBL2|10856|RuvB-like 2 (E. coli)##AF151804|RUVBL2|10856|RuvB-like 2 (E. coli)##AF155138|RUVBL2|10856|RuvB-like 2 (E. coli)##AM393635|RUVBL2|10856|RuvB-like 2 (E. coli)##BC000428|RUVBL2|10856|RuvB-like 2 (E. coli)##Y18417|RUVBL2|10856|RuvB-like 2 (E. coli)##AK057498|RUVBL2|10856|RuvB-like 2 (E. coli)##AL136743|RUVBL2|10856|RuvB-like 2 (E. coli)##DQ891392|RUVBL2|10856|RuvB-like 2 (E. coli)##DQ894568|RUVBL2|10856|RuvB-like 2 (E. coli)##BC003182|GYS1|2997|glycogen synthase 1 (muscle)##NM_001161587|GYS1|2997|glycogen synthase 1 (muscle)##NM_002103|GYS1|2997|glycogen synthase 1 (muscle)##AK223579|GYS1|2997|glycogen synthase 1 (muscle)##AK291672|GYS1|2997|glycogen synthase 1 (muscle)##AK294349|GYS1|2997|glycogen synthase 1 (muscle)##AK300369|GYS1|2997|glycogen synthase 1 (muscle)##AK302738|GYS1|2997|glycogen synthase 1 (muscle)##AK303712|GYS1|2997|glycogen synthase 1 (muscle)##NM_000894|LHB|3972|luteinizing hormone beta polypeptide##K03181|CGB|1082|chorionic gonadotropin, beta polypeptide##BC022796|CGB|1082|chorionic gonadotropin, beta polypeptide##BC106059|CGB|1082|chorionic gonadotropin, beta polypeptide##AK291552|CGB|1082|chorionic gonadotropin, beta polypeptide##NM_000737|CGB|1082|chorionic gonadotropin, beta polypeptide##NM_033378|CGB2|114336|chorionic gonadotropin, beta polypeptide 2##BC107143|CGB2|114336|chorionic gonadotropin, beta polypeptide 2##BC069367|CGB2|114336|chorionic gonadotropin, beta polypeptide 2	0.615379	CTCF.p2:-14:0.615
chr2	160568809	160568928	reg1022289.p1	6.545	+	BX647250 AL834381 TSC_hg19_v1_chr2_-_160473021 NM_013450 AB040909	-95849	-	AK127551 BC107570 TSC_hg19_v1_chr2_-_160472070	-96854	-	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	-425720	-	TSC_hg19_v1_chr2_-_160568946 BX641037 BX537650	38	-	TSC_hg19_v1_chr2_+_160569016 AK292836 AK299051 AK022973 NM_022826 AK222880	127	+	TSC_hg19_v1_chr2_+_160569027 BC065014	172	+	BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BX641037|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7##AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7##AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7##NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7##AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7##BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	0.0	
chr4	156325156	156325317	reg1021800.p2	6.545	+	TSC_hg19_v1_chr4_-_156298108 AK024812 AY690636 NM_001039580	-27125	-	TSC_hg19_v1_chr4_-_156297990 AK301075 BC146864 BC128540 BC128541 BC056683	-27228	-	TSC_hg19_v1_chr4_-_156297959 BC022852	-27281	-	NM_000856 NM_001130682 NM_001130686 NM_001130687 X66534 Y15723 AK312952 BC095395 TSC_hg19_v1_chr4_+_156587999 AK309950 AK096588 NM_001130683 NM_001130685 BX649180 AK226125 BX647200 BC012627	262939	+	TSC_hg19_v1_chr4_+_156588813 NM_001130684 BC028384	263581	+	NM_000857 TSC_hg19_v1_chr4_+_156680190 AK315944 AK300296 AK315199 AK296680 AK307838 BC026332 BC060835 BC047620 X66533 AF020340	354968	+	AK024812|MAP9|79884|microtubule-associated protein 9##AY690636|MAP9|79884|microtubule-associated protein 9##NM_001039580|MAP9|79884|microtubule-associated protein 9##AK301075|MAP9|79884|microtubule-associated protein 9##BC146864|MAP9|79884|microtubule-associated protein 9##BC128540|MAP9|79884|microtubule-associated protein 9##BC128541|MAP9|79884|microtubule-associated protein 9##BC056683|MAP9|79884|microtubule-associated protein 9##BC022852|MAP9|79884|microtubule-associated protein 9##NM_000856|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130682|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130686|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130687|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##X66534|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##Y15723|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK312952|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC095395|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK309950|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK096588|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130683|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130685|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BX649180|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK226125|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BX647200|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC012627|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130684|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC028384|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	0.991665	CTCF.p2:-12:0.992
chr6	135772870	135773038	reg1020805.p1	6.545	+	TSC_hg19_v1_chr6_+_135517056 X17469	-255865	+	TSC_hg19_v1_chr6_+_135516916 AJ616799	-256048	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	-270368	+	AY133243 TSC_hg19_v1_chr6_-_135818858 DQ090887	45871	-	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	45931	-	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	46010	+	X17469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY133243|AHI1|54806|Abelson helper integration site 1##DQ090887|AHI1|54806|Abelson helper integration site 1##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271	0.107843	
chr6	162863881	162864004	reg1021430.p2	6.545	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	-1168882	-	AK094629 TSC_hg19_v1_chr6_-_161413451	-1450529	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-1451084	+	AK057286 NM_001080378 NM_152410 BC044227	284227	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	284785	-	TSC_hg19_v1_chr6_-_163148797 AB245403 AK292590 BC022014	284836	-	AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB245403|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AK292590|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##BC022014|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.742444	CTCF.p2:-24:0.742
chr6	70930825	70930955	reg1022752.p1	6.545	+	AK309023 TSC_hg19_v1_chr6_+_70577418	-353528	+	D38163 NM_001858 AK310621 BC070177 BC113362 BC113364	-354427	+	TSC_hg19_v1_chr6_-_70506885 BC047073 NM_018368	-423945	-	X54413 BC008620 BC063646 NM_078485	61942	-	X54412 BC015409 TSC_hg19_v1_chr6_-_71012827 NM_001851	81910	-	TSC_hg19_v1_chr6_+_71123122 NM_001105531 NM_020819	192223	+	D38163|COL19A1|1310|collagen, type XIX, alpha 1##NM_001858|COL19A1|1310|collagen, type XIX, alpha 1##AK310621|COL19A1|1310|collagen, type XIX, alpha 1##BC070177|COL19A1|1310|collagen, type XIX, alpha 1##BC113362|COL19A1|1310|collagen, type XIX, alpha 1##BC113364|COL19A1|1310|collagen, type XIX, alpha 1##BC047073|LMBRD1|55788|LMBR1 domain containing 1##NM_018368|LMBRD1|55788|LMBR1 domain containing 1##X54413|COL9A1|1297|collagen, type IX, alpha 1##BC008620|COL9A1|1297|collagen, type IX, alpha 1##BC063646|COL9A1|1297|collagen, type IX, alpha 1##NM_078485|COL9A1|1297|collagen, type IX, alpha 1##X54412|COL9A1|1297|collagen, type IX, alpha 1##BC015409|COL9A1|1297|collagen, type IX, alpha 1##NM_001851|COL9A1|1297|collagen, type IX, alpha 1##NM_001105531|FAM135A|57579|family with sequence similarity 135, member A##NM_020819|FAM135A|57579|family with sequence similarity 135, member A	0.949717	CTCF.p2:-38:0.950
chr10	31007354	31007446	reg1017626.p1	6.544	+	AF139543 BC066294 NM_183058	-88765	-	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-284279	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-284461	+	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	281052	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	313421	-	TSC_hg19_v1_chr10_+_31607451 BX647794	600036	+	AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1	0.0	
chr14	94003393	94003505	reg1020345.p1	6.544	+	AY161004 NM_182971 BC101125 BC101126	-189901	+	AK125327 NM_020818	-203885	+	TSC_hg19_v1_chr14_-_93799376 AK291422 BC141850 BX248762 NM_001002860 NM_018167 BC047071	-204045	-	AY225516 AY225517 NM_178013	251316	-	NM_001207071 NM_138344 AK093387 AX748092	381799	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	390259	+	AY161004|COX8C|341947|cytochrome c oxidase subunit VIIIC##NM_182971|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101125|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101126|COX8C|341947|cytochrome c oxidase subunit VIIIC##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)##AK291422|BTBD7|55727|BTB (POZ) domain containing 7##BC141850|BTBD7|55727|BTB (POZ) domain containing 7##BX248762|BTBD7|55727|BTB (POZ) domain containing 7##NM_001002860|BTBD7|55727|BTB (POZ) domain containing 7##NM_018167|BTBD7|55727|BTB (POZ) domain containing 7##BC047071|BTBD7|55727|BTB (POZ) domain containing 7##AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A	0.034983	
chr3	188990634	188990784	reg1021373.p1	6.544	+	AK125682 NM_198485 BC101550 BC101552	-100898	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-325739	+	NM_001167671 BC130584 BC144076	-1047475	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	358550	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	516809	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	847986	-	AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1	0.0	
chr5	107857666	107857781	reg1021609.p1	6.544	+	BC063316 NM_001163315	-139925	-	TSC_hg19_v1_chr5_-_107717106 AK126722	-140593	-	AK308672 NM_001962 U26403	-851133	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	206257	-	AK293376 J03358 NM_005246 AK296874	225839	+	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	226949	+	BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AB593118|HP07349|100652853|uncharacterized protein HP07349##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase	0.858624	CTCF.p2:11:0.859
chr1	146244568	146244658	reg1020232.p1	6.543	+	BC136292 NM_183372 AL832622	-161915	-	AF419617 NM_001101663	-176369	-	NM_001097616	-360746	+	AJ224538 HQ257946 TSC_hg19_v1_chr1_-_146643798	399152	-	AK316005 AK292820 AK304069 AK310982 BC053610 NM_005399 AK294863 AK316183	399479	-	AK295985 TSC_hg19_v1_chr1_+_146649617	404967	+	BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##AF419617|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_001101663|NBPF24|728912|neuroblastoma breakpoint family, member 24##NM_001097616|GPR89C|728932|G protein-coupled receptor 89C##AJ224538|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##HQ257946|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316005|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK292820|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK304069|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK310982|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##BC053610|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##NM_005399|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK294863|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316183|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	0.968636	CTCF.p2:-9:0.969
chr1	32053489	32053615	reg1022012.p1	6.543	+	AK027839 TSC_hg19_v1_chr1_+_32050592	-2998	+	NM_001204415 TSC_hg19_v1_chr1_+_32043786	-9785	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	-11410	+	BC035686 AK290521 NM_001525	29741	+	CR542139 CU678186 CU680360 BC002773 AK301226 TSC_hg19_v1_chr1_-_32110478 AB018357 AB026628 BC012561 AY359011 AK001420	56923	-	NM_012392	57285	-	AK027839|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_001204415|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC035686|HCRTR1|3061|hypocretin (orexin) receptor 1##AK290521|HCRTR1|3061|hypocretin (orexin) receptor 1##NM_001525|HCRTR1|3061|hypocretin (orexin) receptor 1##CR542139|PEF1|553115|penta-EF-hand domain containing 1##BC002773|PEF1|553115|penta-EF-hand domain containing 1##AK301226|PEF1|553115|penta-EF-hand domain containing 1##AB018357|PEF1|553115|penta-EF-hand domain containing 1##AB026628|PEF1|553115|penta-EF-hand domain containing 1##BC012561|PEF1|553115|penta-EF-hand domain containing 1##AY359011|PEF1|553115|penta-EF-hand domain containing 1##AK001420|PEF1|553115|penta-EF-hand domain containing 1##NM_012392|PEF1|553115|penta-EF-hand domain containing 1	0.697723	CTCF.p2:2:0.684
chr17	4316250	4316430	reg1000058.p1	6.543	+	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	-46432	-	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	-46629	-	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	-149189	-	AK172832 NM_182538 TSC_hg19_v1_chr17_+_4337247 BC023646	20902	+	NM_001124758 BC041772 TSC_hg19_v1_chr17_+_4402177 AB441165	85896	+	EU832503 BC050546 TSC_hg19_v1_chr17_-_4458680 AF147709 AK303150 AK301622 AK307948 NM_001105538 NM_014520	142334	-	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK172832|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_182538|SPNS3|201305|spinster homolog 3 (Drosophila)##BC023646|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_001124758|SPNS2|124976|spinster homolog 2 (Drosophila)##BC041772|SPNS2|124976|spinster homolog 2 (Drosophila)##AB441165|SPNS2|124976|spinster homolog 2 (Drosophila)##EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a##BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a##AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a##AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a##AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a##AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a	0.0	
chr2	233476472	233476569	reg1021022.p1	6.543	+	AK310565 NM_001243252	-5754	+	TSC_hg19_v1_chr2_+_233415410 NM_004846 BC005874 AB209519 AK022518 AK303802 BC005392 BC021690 AF038957 AF047695 BC000360 AF068117 BC021226 CU676880	-61075	+	TSC_hg19_v1_chr2_-_233415301 BC035143	-61201	-	TSC_hg19_v1_chr2_+_233497966 AK293581	21450	+	NM_025202 TSC_hg19_v1_chr2_+_233498314 AK315442 BC035476 AK023674 BC002449 AB209715 BC004128 AF218006 BC071886 AB385018	21788	+	TSC_hg19_v1_chr2_+_233562019 NM_001103146 NM_001103147 NM_001103148 NM_015575	85489	+	AK310565|EFHD1|80303|EF-hand domain family, member D1##NM_001243252|EFHD1|80303|EF-hand domain family, member D1##NM_004846|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC005874|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AB209519|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AK022518|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AK303802|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC005392|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC021690|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AF038957|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AF047695|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC000360|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##AF068117|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC021226|EIF4E2|9470|eukaryotic translation initiation factor 4E family member 2##BC035143|TIGD1|200765|tigger transposable element derived 1##AK293581|EFHD1|80303|EF-hand domain family, member D1##NM_025202|EFHD1|80303|EF-hand domain family, member D1##AK315442|EFHD1|80303|EF-hand domain family, member D1##BC035476|EFHD1|80303|EF-hand domain family, member D1##AK023674|EFHD1|80303|EF-hand domain family, member D1##BC002449|EFHD1|80303|EF-hand domain family, member D1##AB209715|EFHD1|80303|EF-hand domain family, member D1##BC004128|EFHD1|80303|EF-hand domain family, member D1##AF218006|EFHD1|80303|EF-hand domain family, member D1##BC071886|EFHD1|80303|EF-hand domain family, member D1##NM_001103146|GIGYF2|26058|GRB10 interacting GYF protein 2##NM_001103147|GIGYF2|26058|GRB10 interacting GYF protein 2##NM_001103148|GIGYF2|26058|GRB10 interacting GYF protein 2##NM_015575|GIGYF2|26058|GRB10 interacting GYF protein 2	0.999516	CTCF.p2:1:1.000
chrX	135793439	135793552	reg1022207.p1	6.543	+	AK129909 TSC_hg19_v1_chrX_-_135749484	-44029	-	BC071754 NM_000074 AK292637 X68550 X67878 L07414 BC074950 X96710 Z15017 FN298241 CU687160 AB590912 AF529195 AY197739	-63124	+	BC000045 NM_016267 AK309912 BC003362 AF137387	-179128	+	AK294929 TSC_hg19_v1_chrX_-_135849503 AK295709 AK299861	56012	-	D25304 TSC_hg19_v1_chrX_-_135863046 AK291742	69558	-	TSC_hg19_v1_chrX_-_135863105 BX537390	69614	-	AK129909|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##BC071754|CD40LG|959|CD40 ligand##NM_000074|CD40LG|959|CD40 ligand##AK292637|CD40LG|959|CD40 ligand##X68550|CD40LG|959|CD40 ligand##X67878|CD40LG|959|CD40 ligand##L07414|CD40LG|959|CD40 ligand##BC074950|CD40LG|959|CD40 ligand##Z15017|CD40LG|959|CD40 ligand##FN298241|CD40LG|959|CD40 ligand##AF529195|CD40LG|959|CD40 ligand##AY197739|CD40LG|959|CD40 ligand##BC000045|VGLL1|51442|vestigial like 1 (Drosophila)##NM_016267|VGLL1|51442|vestigial like 1 (Drosophila)##AK309912|VGLL1|51442|vestigial like 1 (Drosophila)##BC003362|VGLL1|51442|vestigial like 1 (Drosophila)##AF137387|VGLL1|51442|vestigial like 1 (Drosophila)##AK294929|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK295709|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK299861|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##D25304|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK291742|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##BX537390|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	0.853057	CTCF.p2:4:0.853
chr10	94602975	94603087	reg1022507.p1	6.542	+	NM_001013848	-8562	+	TSC_hg19_v1_chr10_+_94449711 NM_002729 AK309463 AK314891 BC014336 BC015110 L16499 X67235 AB528006 BC050638 EU446478	-153322	+	TSC_hg19_v1_chr10_+_94352960 BC126211 BC136474 U37426 X85137	-249988	+	AK293857 NM_019053 AF220217 TSC_hg19_v1_chr10_+_94608276 AL832501 EF571007 AK315544 BC028395 CU688490 EU832839 GQ129240	5226	+	AY356349 NM_183374	217989	+	AK027560 NM_057157	230200	+	NM_001013848|EXOC6|54536|exocyst complex component 6##NM_002729|HHEX|3087|hematopoietically expressed homeobox##AK314891|HHEX|3087|hematopoietically expressed homeobox##BC014336|HHEX|3087|hematopoietically expressed homeobox##BC015110|HHEX|3087|hematopoietically expressed homeobox##L16499|HHEX|3087|hematopoietically expressed homeobox##X67235|HHEX|3087|hematopoietically expressed homeobox##BC050638|HHEX|3087|hematopoietically expressed homeobox##EU446478|HHEX|3087|hematopoietically expressed homeobox##BC126211|KIF11|3832|kinesin family member 11##BC136474|KIF11|3832|kinesin family member 11##U37426|KIF11|3832|kinesin family member 11##X85137|KIF11|3832|kinesin family member 11##AK293857|EXOC6|54536|exocyst complex component 6##NM_019053|EXOC6|54536|exocyst complex component 6##AF220217|EXOC6|54536|exocyst complex component 6##AL832501|EXOC6|54536|exocyst complex component 6##EF571007|EXOC6|54536|exocyst complex component 6##AK315544|EXOC6|54536|exocyst complex component 6##BC028395|EXOC6|54536|exocyst complex component 6##EU832839|EXOC6|54536|exocyst complex component 6##GQ129240|EXOC6|54536|exocyst complex component 6##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1	0.862759	CTCF.p2:3:0.863
chr1	216740268	216740392	reg1021059.p1	6.542	+	AF055580 AY481573 NM_007123 NM_206933	-143593	-	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	-999467	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	-1483720	+	HQ692853 AF117255 BC008218 AY388456 AK291647 TSC_hg19_v1_chr1_-_216896791 AB020639 AK290945 BC064700 NM_001243515 NM_001243518 NM_001243519 NM_001438	156396	-	AY388461 NM_001243514	238378	-	AY388459 AY388458 NM_001243512 NM_001243513 AY388457 AY388460 NM_001243510 NM_001243511	372681	-	AF055580|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##AY481573|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_007123|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_206933|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##HQ692853|ESRRG|2104|estrogen-related receptor gamma##AF117255|ESRRG|2104|estrogen-related receptor gamma##BC008218|ESRRG|2104|estrogen-related receptor gamma##AY388456|ESRRG|2104|estrogen-related receptor gamma##AK291647|ESRRG|2104|estrogen-related receptor gamma##AB020639|ESRRG|2104|estrogen-related receptor gamma##AK290945|ESRRG|2104|estrogen-related receptor gamma##BC064700|ESRRG|2104|estrogen-related receptor gamma##NM_001243515|ESRRG|2104|estrogen-related receptor gamma##NM_001243518|ESRRG|2104|estrogen-related receptor gamma##NM_001243519|ESRRG|2104|estrogen-related receptor gamma##NM_001438|ESRRG|2104|estrogen-related receptor gamma##AY388461|ESRRG|2104|estrogen-related receptor gamma##NM_001243514|ESRRG|2104|estrogen-related receptor gamma##AY388459|ESRRG|2104|estrogen-related receptor gamma##AY388458|ESRRG|2104|estrogen-related receptor gamma##NM_001243512|ESRRG|2104|estrogen-related receptor gamma##NM_001243513|ESRRG|2104|estrogen-related receptor gamma##AY388457|ESRRG|2104|estrogen-related receptor gamma##AY388460|ESRRG|2104|estrogen-related receptor gamma##NM_001243510|ESRRG|2104|estrogen-related receptor gamma##NM_001243511|ESRRG|2104|estrogen-related receptor gamma	0.595	CTCF.p2:15:0.595
chr11	33764174	33764289	reg1019596.p2	6.541	+	TSC_hg19_v1_chr11_-_33757970 M27909 AK311778 X16447 X17198 NM_000611 NM_203329 NM_203330 NM_203331	-6283	-	NM_001127227	-19734	-	AK309894 NM_001127223 NM_001127225 NM_001127226	-19959	-	AB209039 AF176702 TSC_hg19_v1_chr11_-_33796067 AF174595 CU692298 EU832324 EU832409 AL136625 BC046110 AK001943 AK128454 AK304866 BC039291 NM_012175 NM_033406	31761	-	AB463835 CU692080 DQ892333 DQ895538 BC073973 TSC_hg19_v1_chr11_-_33891132	126811	-	BC035607 TSC_hg19_v1_chr11_-_33891285	127041	-	M27909|CD59|966|CD59 molecule, complement regulatory protein##AK311778|CD59|966|CD59 molecule, complement regulatory protein##X16447|CD59|966|CD59 molecule, complement regulatory protein##X17198|CD59|966|CD59 molecule, complement regulatory protein##NM_000611|CD59|966|CD59 molecule, complement regulatory protein##NM_203329|CD59|966|CD59 molecule, complement regulatory protein##NM_203330|CD59|966|CD59 molecule, complement regulatory protein##NM_203331|CD59|966|CD59 molecule, complement regulatory protein##NM_001127227|CD59|966|CD59 molecule, complement regulatory protein##AK309894|CD59|966|CD59 molecule, complement regulatory protein##NM_001127223|CD59|966|CD59 molecule, complement regulatory protein##NM_001127225|CD59|966|CD59 molecule, complement regulatory protein##NM_001127226|CD59|966|CD59 molecule, complement regulatory protein##AB209039|FBXO3|26273|F-box protein 3##AF176702|FBXO3|26273|F-box protein 3##AF174595|FBXO3|26273|F-box protein 3##EU832324|FBXO3|26273|F-box protein 3##EU832409|FBXO3|26273|F-box protein 3##AL136625|FBXO3|26273|F-box protein 3##BC046110|FBXO3|26273|F-box protein 3##AK001943|FBXO3|26273|F-box protein 3##AK128454|FBXO3|26273|F-box protein 3##AK304866|FBXO3|26273|F-box protein 3##BC039291|FBXO3|26273|F-box protein 3##NM_012175|FBXO3|26273|F-box protein 3##NM_033406|FBXO3|26273|F-box protein 3##DQ892333|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##DQ895538|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC073973|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC035607|LMO2|4005|LIM domain only 2 (rhombotin-like 1)	0.27102	CTCF.p2:-10:0.271
chr12	62517634	62517743	reg1021050.p1	6.541	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	-2434549	+	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	-2527771	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-3203386	-	BC050347 NM_178539	68895	-	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	136496	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	342891	+	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)	0.828684	CTCF.p2:-19:0.829
chr2	180942179	180942282	reg1021813.p2	6.541	+	BC031216 NM_020943 TSC_hg19_v1_chr2_-_180871834 AK025635 BC057826	-70416	-	TSC_hg19_v1_chr2_-_180726110 NM_152520	-216065	-	BC092423 TSC_hg19_v1_chr2_-_180726080	-216157	-	TSC_hg19_v1_chr2_+_181845341 NM_182678 NM_006357	902995	+	TSC_hg19_v1_chr2_+_181845369 BC092407	903140	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	903413	+	BC031216|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##NM_020943|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##AK025635|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##BC057826|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##NM_152520|ZNF385B|151126|zinc finger protein 385B##BC092423|ZNF385B|151126|zinc finger protein 385B##NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	0.056841	
chr2	211309977	211310100	reg1022714.p1	6.541	+	AB527940 CR456869 TSC_hg19_v1_chr2_-_211179896 NM_079420 AK311942	-130199	-	X05451 M20643 AK311892 BC005318 NM_079422	-141712	-	BC064549 BC039063 AK313498 AK296161 NM_001608	-219858	-	TSC_hg19_v1_chr2_-_211341454 AK294674 BC028685 NM_001136574 Y11395 AK309295 AK312381 NM_006055 NM_001136575	31415	-	NM_001122633 AB208800	32380	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	111351	+	CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##X05451|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##M20643|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##AK311892|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##BC005318|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##NM_079422|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##BC064549|ACADL|33|acyl-CoA dehydrogenase, long chain##BC039063|ACADL|33|acyl-CoA dehydrogenase, long chain##AK313498|ACADL|33|acyl-CoA dehydrogenase, long chain##AK296161|ACADL|33|acyl-CoA dehydrogenase, long chain##NM_001608|ACADL|33|acyl-CoA dehydrogenase, long chain##AK294674|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##BC028685|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_001136574|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##Y11395|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##AK309295|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##AK312381|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_006055|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_001136575|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial	0.998534	CTCF.p2:0:0.999
chr7	19531613	19531718	reg1022033.p1	6.541	+	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	-346652	-	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	-374387	-	TSC_hg19_v1_chr7_+_18548965 AK304343	-982696	+	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	216981	-	BX648384 NM_152774	280738	-	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	725315	-	BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##AK304343|HDAC9|9734|histone deacetylase 9##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1	0.0	
chr1	107739710	107739848	reg1022701.p1	6.540	+	AB023193 TSC_hg19_v1_chr1_+_107683657	-56175	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-57037	+	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	-140414	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	491345	-	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	767821	-	AJ619961 NM_213651 AK292567	995617	-	AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.637288	CTCF.p2:0:0.637
chr11	58974213	58974387	reg1022563.p1	6.540	+	TSC_hg19_v1_chr11_+_58940008 AB023154 AB385405	-34271	+	TSC_hg19_v1_chr11_+_58939648 NM_015177	-34615	+	NM_022074 NM_198847 AK291453 BC071759 AK092061 AX747338	-62021	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	6107	-	BC140917 NM_001004729	157607	+	NM_001001954 BC136991	216136	-	AB023154|DTX4|23220|deltex homolog 4 (Drosophila)##NM_015177|DTX4|23220|deltex homolog 4 (Drosophila)##NM_022074|FAM111A|63901|family with sequence similarity 111, member A##NM_198847|FAM111A|63901|family with sequence similarity 111, member A##AK291453|FAM111A|63901|family with sequence similarity 111, member A##BC071759|FAM111A|63901|family with sequence similarity 111, member A##AK092061|FAM111A|63901|family with sequence similarity 111, member A##BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1##BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001001954|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC136991|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2	0.95147	CTCF.p2:-10:0.951
chr1	2144245	2144371	reg1022552.p1	6.540	+	AK127994 NM_001146310	-5137	-	TSC_hg19_v1_chr1_-_2126212 BC041041 AF469129 BC066360 AK055593 BC103992 NM_182533	-18129	-	NM_001033582	-108154	+	NM_003036 X15218 TSC_hg19_v1_chr1_+_2160159	15861	+	TSC_hg19_v1_chr1_-_2322994 AK024003 NM_024848	178684	-	TSC_hg19_v1_chr1_-_2322997 AK299217 AK310323 BC021704	178762	-	AK127994|C1orf86|199990|chromosome 1 open reading frame 86##NM_001146310|C1orf86|199990|chromosome 1 open reading frame 86##BC041041|C1orf86|199990|chromosome 1 open reading frame 86##AF469129|C1orf86|199990|chromosome 1 open reading frame 86##BC066360|C1orf86|199990|chromosome 1 open reading frame 86##AK055593|C1orf86|199990|chromosome 1 open reading frame 86##BC103992|C1orf86|199990|chromosome 1 open reading frame 86##NM_182533|C1orf86|199990|chromosome 1 open reading frame 86##NM_001033582|PRKCZ|5590|protein kinase C, zeta##NM_003036|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##X15218|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##AK024003|MORN1|79906|MORN repeat containing 1##NM_024848|MORN1|79906|MORN repeat containing 1##AK299217|MORN1|79906|MORN repeat containing 1##AK310323|MORN1|79906|MORN repeat containing 1##BC021704|MORN1|79906|MORN repeat containing 1	0.022853	
chr1	225965296	225965423	reg1022368.p1	6.540	+	AF519769 TSC_hg19_v1_chr1_-_225840803 AY345143 AK290179 BC095481 NM_001008493 NM_018212	-124572	-	NM_194442	-348803	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	-349558	-	NM_001130440 NM_003133 TSC_hg19_v1_chr1_+_225965547 BC066957 BC008443 EF488978 AF070649 BC021995 BC106005 U20998 BC015094 AK289595 BC022415 BC045603	173	+	TSC_hg19_v1_chr1_+_225965556 BC064351 AL050363 BC067845	211	+	TSC_hg19_v1_chr1_+_225997796 AK313436 NM_001136018	32413	+	AF519769|ENAH|55740|enabled homolog (Drosophila)##AY345143|ENAH|55740|enabled homolog (Drosophila)##AK290179|ENAH|55740|enabled homolog (Drosophila)##BC095481|ENAH|55740|enabled homolog (Drosophila)##NM_001008493|ENAH|55740|enabled homolog (Drosophila)##NM_018212|ENAH|55740|enabled homolog (Drosophila)##NM_194442|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor##NM_001130440|SRP9|6726|signal recognition particle 9kDa##NM_003133|SRP9|6726|signal recognition particle 9kDa##BC066957|SRP9|6726|signal recognition particle 9kDa##BC008443|SRP9|6726|signal recognition particle 9kDa##EF488978|SRP9|6726|signal recognition particle 9kDa##AF070649|SRP9|6726|signal recognition particle 9kDa##BC021995|SRP9|6726|signal recognition particle 9kDa##BC106005|SRP9|6726|signal recognition particle 9kDa##U20998|SRP9|6726|signal recognition particle 9kDa##BC015094|SRP9|6726|signal recognition particle 9kDa##AK289595|SRP9|6726|signal recognition particle 9kDa##BC022415|SRP9|6726|signal recognition particle 9kDa##BC064351|SRP9|6726|signal recognition particle 9kDa##AL050363|SRP9|6726|signal recognition particle 9kDa##BC067845|SRP9|6726|signal recognition particle 9kDa##AK313436|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##NM_001136018|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)	0.0	
chr6	111963897	111964026	reg1020997.p2	6.540	+	NM_001164281 NM_147686	-36488	-	TSC_hg19_v1_chr6_-_111927082 AL050289 AK310141 AF136406 AF136407	-36789	-	BC002823 AF085921 AF136405 TSC_hg19_v1_chr6_-_111927072 AK310922 AK025351 AK314415	-36894	-	AB451293 AB451426 AB528738 CU689398 S74774 NM_153047	77297	-	BC032496 NM_153048	116347	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	230574	-	NM_001164281|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_147686|TRAF3IP2|10758|TRAF3 interacting protein 2##AL050289|TRAF3IP2|10758|TRAF3 interacting protein 2##AK310141|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136406|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136407|TRAF3IP2|10758|TRAF3 interacting protein 2##BC002823|TRAF3IP2|10758|TRAF3 interacting protein 2##AF085921|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136405|TRAF3IP2|10758|TRAF3 interacting protein 2##AK310922|TRAF3IP2|10758|TRAF3 interacting protein 2##AK025351|TRAF3IP2|10758|TRAF3 interacting protein 2##AK314415|TRAF3IP2|10758|TRAF3 interacting protein 2##AB451293|FYN|2534|FYN oncogene related to SRC, FGR, YES##AB451426|FYN|2534|FYN oncogene related to SRC, FGR, YES##S74774|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153047|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES	0.131714	
chr12	69782297	69782426	reg1020490.p1	6.539	+	TSC_hg19_v1_chr12_+_69753535 NM_006530 U61384 AJ245746 BC000994 AK001413 AB464359 EU446926	-28755	+	TSC_hg19_v1_chr12_+_69742163 AK310930 AK311779 J03801 FJ795023 BC004147 M21119 M19045 AB463851 DQ892271 DQ895472 U25677	-40152	+	TSC_hg19_v1_chr12_+_69742133 AK130149 NM_000239	-40230	+	TSC_hg19_v1_chr12_+_69864170 NM_001042555 NM_006654 BC021562 AK312477	81781	+	TSC_hg19_v1_chr12_+_69979238 NM_006431 AK290767 BC113514 BC113516 AK297685 AF026166	196863	+	AF026293 TSC_hg19_v1_chr12_+_69979275	196916	+	NM_006530|YEATS4|8089|YEATS domain containing 4##U61384|YEATS4|8089|YEATS domain containing 4##AJ245746|YEATS4|8089|YEATS domain containing 4##BC000994|YEATS4|8089|YEATS domain containing 4##AK001413|YEATS4|8089|YEATS domain containing 4##EU446926|YEATS4|8089|YEATS domain containing 4##AK311779|LYZ|4069|lysozyme##J03801|LYZ|4069|lysozyme##FJ795023|LYZ|4069|lysozyme##BC004147|LYZ|4069|lysozyme##M21119|LYZ|4069|lysozyme##M19045|LYZ|4069|lysozyme##DQ892271|LYZ|4069|lysozyme##DQ895472|LYZ|4069|lysozyme##U25677|LYZ|4069|lysozyme##AK130149|LYZ|4069|lysozyme##NM_000239|LYZ|4069|lysozyme##NM_001042555|FRS2|10818|fibroblast growth factor receptor substrate 2##NM_006654|FRS2|10818|fibroblast growth factor receptor substrate 2##BC021562|FRS2|10818|fibroblast growth factor receptor substrate 2##AK312477|FRS2|10818|fibroblast growth factor receptor substrate 2##NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)	0.896245	CTCF.p2:-13:0.896
chr16	85892061	85892201	reg1020659.p1	6.539	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-58796	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-58826	+	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	-58898	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	40655	+	TSC_hg19_v1_chr16_-_86542463 AK091834	650333	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	652025	+	BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1	0.0	
chr1	87207767	87207885	reg1021665.p1	6.539	+	TSC_hg19_v1_chr1_+_87170526 BC007455 AF151819 AF257318 AF263293 AB385341 DQ893029 DQ896273	-37272	+	TSC_hg19_v1_chr1_+_87170510 AF350371	-37327	+	TSC_hg19_v1_chr1_+_87170289 AK303710 AB007960 AK225864 AK001954	-37448	+	CU675093 AF051894 AF288991 TSC_hg19_v1_chr1_-_87379800 AK225252 AK225640 BC016359	171966	-	AL833575 TSC_hg19_v1_chr1_-_87379810 BC005294 BC021697	171995	-	TSC_hg19_v1_chr1_-_87380011 NM_004261 NM_203341	172231	-	BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF350371|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK303710|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AB007960|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK225864|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK001954|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF051894|SEP15|9403|15 kDa selenoprotein##AF288991|SEP15|9403|15 kDa selenoprotein##AK225252|SEP15|9403|15 kDa selenoprotein##AK225640|SEP15|9403|15 kDa selenoprotein##BC016359|SEP15|9403|15 kDa selenoprotein##AL833575|SEP15|9403|15 kDa selenoprotein##BC005294|SEP15|9403|15 kDa selenoprotein##BC021697|SEP15|9403|15 kDa selenoprotein##NM_004261|SEP15|9403|15 kDa selenoprotein##NM_203341|SEP15|9403|15 kDa selenoprotein	0.445741	CTCF.p2:0:0.446
chr8	76560525	76560655	reg1020196.p1	6.539	+	BX571750 NM_004133 EU832451 HQ692842	-108376	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	-240402	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-663681	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	1032920	+	AB083343 TSC_hg19_v1_chr8_+_77593533	1032938	+	AK131399 TSC_hg19_v1_chr8_+_77765961	1205299	+	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4##AB083343|ZFHX4|79776|zinc finger homeobox 4##AK131399|ZFHX4|79776|zinc finger homeobox 4	0.916314	CTCF.p2:19:0.916
chr9	99329176	99329279	reg1021773.p1	6.539	+	TSC_hg19_v1_chr9_-_99329110 AK126388 NM_001077181	-80	-	TSC_hg19_v1_chr9_+_99212450 NM_014282 BC018788 AF241831 AB463760	-116758	+	TSC_hg19_v1_chr9_-_99180672 AY554164 AY554165 NM_153695	-148543	-	TSC_hg19_v1_chr9_-_99382126 AF064104 AF064105 NM_003671 NM_033331	52893	-	TSC_hg19_v1_chr9_-_99417600 BC136501 BC136503 NM_153698	88383	-	AB023189 NM_014930 TSC_hg19_v1_chr9_-_99540352 BC036676 BC068587 BC058022 AK292600	211126	-	AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_014282|HABP4|22927|hyaluronan binding protein 4##BC018788|HABP4|22927|hyaluronan binding protein 4##AF241831|HABP4|22927|hyaluronan binding protein 4##AY554164|ZNF367|195828|zinc finger protein 367##AY554165|ZNF367|195828|zinc finger protein 367##NM_153695|ZNF367|195828|zinc finger protein 367##AF064104|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##AF064105|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_003671|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_033331|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##BC136501|C9orf21|195827|chromosome 9 open reading frame 21##BC136503|C9orf21|195827|chromosome 9 open reading frame 21##NM_153698|C9orf21|195827|chromosome 9 open reading frame 21##AB023189|ZNF510|22869|zinc finger protein 510##NM_014930|ZNF510|22869|zinc finger protein 510##BC036676|ZNF510|22869|zinc finger protein 510##BC068587|ZNF510|22869|zinc finger protein 510##BC058022|ZNF510|22869|zinc finger protein 510##AK292600|ZNF510|22869|zinc finger protein 510	0.0	
chr10	61640210	61640327	reg1023221.p1	6.538	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-170544	-	AK299924 NM_001143773	-517608	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-517983	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	25933	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	26056	-	AK292927 AK092527 NM_001149	260448	-	AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.981507	CTCF.p2:10:0.982
chr12	126257701	126257838	reg1022789.p1	6.538	+	NM_052907	-446608	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-707701	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-707828	+	NM_001136103	2494178	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	3050674	-	BC043528 TSC_hg19_v1_chr12_+_129337985	3080215	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.996361	CTCF.p2:13:0.996
chr12	7266016	7266115	reg1021287.p1	6.538	+	BC128428 AF178985 TSC_hg19_v1_chr12_-_7261802 AK222802 BC062428 AK314299 AK024084 NM_016546	-4237	-	TSC_hg19_v1_chr12_-_7245057 AK291313	-21006	-	TSC_hg19_v1_chr12_-_7245038 M14058 X04701 AK024951 AK222481 AK222491 AK303750 BC035220 NM_001733	-21041	-	DQ892613 DQ895853 AY007436 AF212239 NM_031491 AK311977 AK096947 AK223378 BC029355	15365	-	TSC_hg19_v1_chr12_+_7282990 AK316059 NM_014718 AJ277460 BC111491 AK299177 BC104767 BC112283 AB527393 BC148258	17059	+	AK292256 NM_001131026	75693	+	AF178985|C1RL|51279|complement component 1, r subcomponent-like##AK222802|C1RL|51279|complement component 1, r subcomponent-like##BC062428|C1RL|51279|complement component 1, r subcomponent-like##AK314299|C1RL|51279|complement component 1, r subcomponent-like##AK024084|C1RL|51279|complement component 1, r subcomponent-like##NM_016546|C1RL|51279|complement component 1, r subcomponent-like##AK291313|C1R|715|complement component 1, r subcomponent##M14058|C1R|715|complement component 1, r subcomponent##X04701|C1R|715|complement component 1, r subcomponent##AK024951|C1R|715|complement component 1, r subcomponent##AK222481|C1R|715|complement component 1, r subcomponent##AK222491|C1R|715|complement component 1, r subcomponent##AK303750|C1R|715|complement component 1, r subcomponent##BC035220|C1R|715|complement component 1, r subcomponent##NM_001733|C1R|715|complement component 1, r subcomponent##DQ892613|RBP5|83758|retinol binding protein 5, cellular##DQ895853|RBP5|83758|retinol binding protein 5, cellular##AY007436|RBP5|83758|retinol binding protein 5, cellular##AF212239|RBP5|83758|retinol binding protein 5, cellular##NM_031491|RBP5|83758|retinol binding protein 5, cellular##AK311977|RBP5|83758|retinol binding protein 5, cellular##AK096947|RBP5|83758|retinol binding protein 5, cellular##AK223378|RBP5|83758|retinol binding protein 5, cellular##BC029355|RBP5|83758|retinol binding protein 5, cellular##AK316059|CLSTN3|9746|calsyntenin 3##NM_014718|CLSTN3|9746|calsyntenin 3##AJ277460|CLSTN3|9746|calsyntenin 3##BC111491|CLSTN3|9746|calsyntenin 3##AK299177|CLSTN3|9746|calsyntenin 3##BC104767|CLSTN3|9746|calsyntenin 3##BC112283|CLSTN3|9746|calsyntenin 3##BC148258|CLSTN3|9746|calsyntenin 3##AK292256|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131026|PEX5|5830|peroxisomal biogenesis factor 5	0.969088	CTCF.p2:16:0.969
chr16	30538318	30538499	reg1020129.p1	6.538	+	TSC_hg19_v1_chr16_-_30538096 AK295274	-326	-	TSC_hg19_v1_chr16_-_30537922 BC013760 NM_024671	-517	-	AK027089 AK315449 TSC_hg19_v1_chr16_-_30537813 BC092403	-658	-	TSC_hg19_v1_chr16_-_30546003 AK292192	7592	-	TSC_hg19_v1_chr16_-_30546234 AB209546 AK299308 AK054567 BC001361 NM_023931 AK316254	7782	-	EU446557 BC008821 AK093992 AX748400 NM_001172679 NM_033410 TSC_hg19_v1_chr16_-_30569709	31200	-	AK295274|ZNF768|79724|zinc finger protein 768##BC013760|ZNF768|79724|zinc finger protein 768##NM_024671|ZNF768|79724|zinc finger protein 768##AK027089|ZNF768|79724|zinc finger protein 768##AK315449|ZNF768|79724|zinc finger protein 768##BC092403|ZNF768|79724|zinc finger protein 768##AK292192|ZNF747|65988|zinc finger protein 747##AB209546|ZNF747|65988|zinc finger protein 747##AK054567|ZNF747|65988|zinc finger protein 747##BC001361|ZNF747|65988|zinc finger protein 747##NM_023931|ZNF747|65988|zinc finger protein 747##EU446557|ZNF764|92595|zinc finger protein 764##BC008821|ZNF764|92595|zinc finger protein 764##AK093992|ZNF764|92595|zinc finger protein 764##NM_001172679|ZNF764|92595|zinc finger protein 764##NM_033410|ZNF764|92595|zinc finger protein 764	0.0	
chr19	4730824	4730975	reg1025275.p1	6.538	+	TSC_hg19_v1_chr19_-_4723831 AF542510 AK122654 NM_139159 AF452102	-7055	-	BC037948 TSC_hg19_v1_chr19_-_4723798	-7099	-	TSC_hg19_v1_chr19_-_4723770 AK131499	-7132	-	TSC_hg19_v1_chr19_+_4769144 AB058892 AB058893 BC090884 BC117294 BC117296 BC143983	38262	+	NM_018708 TSC_hg19_v1_chr19_+_4791745	60837	+	AK126532 AK315554 TSC_hg19_v1_chr19_+_4791756	60857	+	AF542510|DPP9|91039|dipeptidyl-peptidase 9##AK122654|DPP9|91039|dipeptidyl-peptidase 9##NM_139159|DPP9|91039|dipeptidyl-peptidase 9##AF452102|DPP9|91039|dipeptidyl-peptidase 9##BC037948|DPP9|91039|dipeptidyl-peptidase 9##AK131499|DPP9|91039|dipeptidyl-peptidase 9##AB058892|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##AB058893|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##BC090884|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##BC117294|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##BC117296|MIR7-3HG|284424|MIR7-3 host gene (non-protein coding)##NM_018708|FEM1A|55527|fem-1 homolog a (C. elegans)##AK126532|FEM1A|55527|fem-1 homolog a (C. elegans)##AK315554|FEM1A|55527|fem-1 homolog a (C. elegans)	0.953191	CTCF.p2:3:0.953
chr19	57610648	57610759	reg1021209.p1	6.538	+	AB003039 AF208967 AF208968 AF208969 AB006625 BC150272 AF166122 TSC_hg19_v1_chr19_-_57352095 AK295679 AK307476 NM_001146184 NM_001146185 NM_001146187 NM_006210 NM_001146326 NM_001146327 NM_015363	-258626	-	AF208970 NM_001146186	-274330	-	AK299565 NM_001005850 TSC_hg19_v1_chr19_-_57183124	-427578	-	AK308285 AF124433 NM_020903	20756	+	AF365931 NM_052882	45866	-	NM_001012729	68152	-	AB003039|PEG3|5178|paternally expressed 3##AF208967|PEG3|5178|paternally expressed 3##AF208968|PEG3|5178|paternally expressed 3##AF208969|PEG3|5178|paternally expressed 3##AB006625|PEG3|5178|paternally expressed 3##BC150272|PEG3|5178|paternally expressed 3##AF166122|ZIM2|23619|zinc finger, imprinted 2##AK295679|PEG3|5178|paternally expressed 3##AK307476|PEG3|5178|paternally expressed 3##NM_001146184|PEG3|5178|paternally expressed 3##NM_001146185|PEG3|5178|paternally expressed 3##NM_001146187|PEG3|5178|paternally expressed 3##NM_006210|PEG3|5178|paternally expressed 3##NM_001146326|ZIM2|23619|zinc finger, imprinted 2##NM_001146327|ZIM2|23619|zinc finger, imprinted 2##NM_015363|ZIM2|23619|zinc finger, imprinted 2##AF208970|PEG3|5178|paternally expressed 3##NM_001146186|PEG3|5178|paternally expressed 3##AK299565|ZNF835|90485|zinc finger protein 835##NM_001005850|ZNF835|90485|zinc finger protein 835##AK308285|USP29|57663|ubiquitin specific peptidase 29##AF124433|USP29|57663|ubiquitin specific peptidase 29##NM_020903|USP29|57663|ubiquitin specific peptidase 29##AF365931|ZIM3|114026|zinc finger, imprinted 3##NM_052882|ZIM3|114026|zinc finger, imprinted 3##NM_001012729|DUXA|503835|double homeobox A	0.999914	CTCF.p2:33:1.000
chr3	140824546	140824724	reg1000927.p1	6.538	+	AF403029 BC008324 NM_080862 AK056367	-53878	+	TSC_hg19_v1_chr3_+_140770412 BC051354	-54157	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	-163868	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	126051	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	218421	+	TSC_hg19_v1_chr3_+_141087345 AK311501	262722	+	AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38	0.0	
chr1	220454525	220454655	reg1024688.p1	6.537	+	TSC_hg19_v1_chr1_-_220445835 NM_012414	-8745	-	BC036513 TSC_hg19_v1_chr1_-_220445796	-8794	-	TSC_hg19_v1_chr1_-_220445786 AK291234	-8800	-	TSC_hg19_v1_chr1_+_220701527 BC068608	246935	+	TSC_hg19_v1_chr1_+_220701565 AB040910 NM_018650	246967	+	AK098103 AK314614 AF154845 BC113869 BC114478 TSC_hg19_v1_chr1_+_220702027 AK295506 AB385474	247392	+	NM_012414|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC036513|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AK291234|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC068608|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AB040910|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##NM_018650|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK098103|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK314614|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AF154845|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC113869|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##BC114478|MARK1|4139|MAP/microtubule affinity-regulating kinase 1##AK295506|MARK1|4139|MAP/microtubule affinity-regulating kinase 1	0.801583	CTCF.p2:-15:0.802
chr17	47472312	47472493	reg1000069.p1	6.537	+	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	-32822	-	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	-164259	-	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-184325	+	BC095460 TSC_hg19_v1_chr17_-_47492215	19813	-	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	19846	-	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	100286	+	CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##BC095460|PHB|5245|prohibitin##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor	0.0	
chr2	217004758	217004878	reg1022953.p1	6.537	+	TSC_hg19_v1_chr2_+_216986829 AK026166	-17951	+	TSC_hg19_v1_chr2_+_216974124 J04977 M30938 AK290740 BC095442 BC019027 AB489155 CU676354 DQ892660 DQ895925	-30679	+	TSC_hg19_v1_chr2_+_216974112 AK222603	-30709	+	TSC_hg19_v1_chr2_-_217236666 AB037820 NM_020814	231889	-	NM_014140 TSC_hg19_v1_chr2_+_217277188 AK023780	272380	+	TSC_hg19_v1_chr2_+_217277487 NM_001127207 AF432223 BC043341	272660	+	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##J04977|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##M30938|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK290740|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC095442|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC019027|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ892660|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ895925|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK222603|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AB037820|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_020814|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_014140|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AK023780|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##NM_001127207|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AF432223|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##BC043341|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	0.089896	
chr2	55796276	55796386	reg1022995.p1	6.537	+	TSC_hg19_v1_chr2_+_55746786 AY358097 NM_080667 AK309764 AK308776 BC010011 CU679569 DQ893082 DQ896343	-49505	+	TSC_hg19_v1_chr2_-_55646993 BC014905 BC041160 BC142646 BC142700 AK025723 NM_001135597 NM_018084	-149327	-	TSC_hg19_v1_chr2_-_55559749 BC056885	-236545	-	TSC_hg19_v1_chr2_-_55844739 AB037808 BC006215 BC060855 AK296481 AK056036 NM_001122964 NM_020463 BC032531	48463	-	TSC_hg19_v1_chr2_-_55844909 BC045714	48580	-	TSC_hg19_v1_chr2_-_55846016 AK056503	49687	-	AY358097|CCDC104|112942|coiled-coil domain containing 104##NM_080667|CCDC104|112942|coiled-coil domain containing 104##AK309764|CCDC104|112942|coiled-coil domain containing 104##AK308776|CCDC104|112942|coiled-coil domain containing 104##BC010011|CCDC104|112942|coiled-coil domain containing 104##DQ893082|CCDC104|112942|coiled-coil domain containing 104##DQ896343|CCDC104|112942|coiled-coil domain containing 104##BC014905|CCDC88A|55704|coiled-coil domain containing 88A##BC041160|CCDC88A|55704|coiled-coil domain containing 88A##BC142646|CCDC88A|55704|coiled-coil domain containing 88A##BC142700|CCDC88A|55704|coiled-coil domain containing 88A##AK025723|CCDC88A|55704|coiled-coil domain containing 88A##NM_001135597|CCDC88A|55704|coiled-coil domain containing 88A##NM_018084|CCDC88A|55704|coiled-coil domain containing 88A##BC056885|CCDC88A|55704|coiled-coil domain containing 88A##AB037808|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##BC006215|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##BC060855|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##AK296481|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##AK056036|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##NM_001122964|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##NM_020463|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##BC032531|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##BC045714|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)##AK056503|SMEK2|57223|SMEK homolog 2, suppressor of mek1 (Dictyostelium)	0.830069	CTCF.p2:-5:0.830
chr3	159881176	159881287	reg1020698.p1	6.537	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	-174499	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	-323372	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	-323538	+	TSC_hg19_v1_chr3_+_159943306 NM_001168214	62106	+	BC031660 TSC_hg19_v1_chr3_+_159943777	62472	+	AB037795 NM_001190242	220267	-	NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80##BC031660|C3orf80|401097|chromosome 3 open reading frame 80##AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	0.922237	CTCF.p2:5:0.922
chr9	80736559	80736681	reg1022751.p1	6.537	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-90436	-	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	-473389	-	AK027023 TSC_hg19_v1_chr9_+_79968352	-768272	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	114410	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	175438	+	TSC_hg19_v1_chr9_+_82186879 NM_007005	1450266	+	AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.744217	CTCF.p2:11:0.744
chr17	18694851	18694964	reg1020707.p2	6.536	+	TSC_hg19_v1_chr17_+_18684595 BC008430 NM_016078 AK290813 BX537929 BX648167	-10305	+	NM_031456 BC028364 AK310383 AL136822	-47551	+	AK301647 DQ232882 NM_001037330 AK316368 AK301639 AK298836 BC146902 BC146907	-69491	+	NM_001243936 NM_001243942 TSC_hg19_v1_chr17_+_18759671 BX648850 AK303911	64734	+	NM_001243941 NM_002767 TSC_hg19_v1_chr17_+_18761443 AK313087	66505	+	TSC_hg19_v1_chr17_+_18761445 BC106050 AK304544	66563	+	BC008430|FAM18B1|51030|family with sequence similarity 18, member B1##NM_016078|FAM18B1|51030|family with sequence similarity 18, member B1##AK290813|FAM18B1|51030|family with sequence similarity 18, member B1##BX537929|FAM18B1|51030|family with sequence similarity 18, member B1##BX648167|FAM18B1|51030|family with sequence similarity 18, member B1##NM_031456|FBXW10|10517|F-box and WD repeat domain containing 10##BC028364|FBXW10|10517|F-box and WD repeat domain containing 10##AK310383|FBXW10|10517|F-box and WD repeat domain containing 10##AL136822|FBXW10|10517|F-box and WD repeat domain containing 10##AK301647|TRIM16L|147166|tripartite motif containing 16-like##DQ232882|TRIM16L|147166|tripartite motif containing 16-like##NM_001037330|TRIM16L|147166|tripartite motif containing 16-like##AK316368|TRIM16L|147166|tripartite motif containing 16-like##AK301639|TRIM16L|147166|tripartite motif containing 16-like##AK298836|TRIM16L|147166|tripartite motif containing 16-like##BC146902|TRIM16L|147166|tripartite motif containing 16-like##BC146907|TRIM16L|147166|tripartite motif containing 16-like##NM_001243936|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##NM_001243942|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BX648850|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK303911|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##NM_001243941|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##NM_002767|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK313087|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC106050|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK304544|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	0.912968	CTCF.p2:13:0.913
chr9	135916420	135916522	reg1020326.p1	6.536	+	TSC_hg19_v1_chr9_+_135906386 AK000194 AK097295 AK293980 BC006409 AY007123 DQ892071 DQ895265 AJ420443 BC030157	-10083	+	NM_001122823 NM_012087 TSC_hg19_v1_chr9_+_135906094 AK225761 AK311481 AK055092 AF133124 BC011355 BC017337	-10372	+	TSC_hg19_v1_chr9_+_135894809 BC070500	-21664	+	NM_001807 S79774 M85201 BC042510 AK299965	20904	+	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	80028	-	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	108215	-	AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_001122823|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_012087|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK225761|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK311481|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK055092|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF133124|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC011355|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC017337|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator	0.84344	CTCF.p2:-3:0.843
chr1	198025516	198025621	reg1022541.p1	6.535	+	TSC_hg19_v1_chr1_+_197886502 AY273889 NM_020204	-139061	+	AJ296272 NM_001014434 AJ277915	-143929	+	BC130608 BC130634 NM_001024594 HQ258066 BC038214	-153837	+	TSC_hg19_v1_chr1_+_198126162 NM_133494 AK313411	100486	+	NM_133262 NM_133326	484506	-	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	582605	+	AY273889|LHX9|56956|LIM homeobox 9##NM_020204|LHX9|56956|LIM homeobox 9##AJ296272|LHX9|56956|LIM homeobox 9##NM_001014434|LHX9|56956|LIM homeobox 9##AJ277915|LHX9|56956|LIM homeobox 9##BC130608|C1orf53|388722|chromosome 1 open reading frame 53##BC130634|C1orf53|388722|chromosome 1 open reading frame 53##NM_001024594|C1orf53|388722|chromosome 1 open reading frame 53##HQ258066|C1orf53|388722|chromosome 1 open reading frame 53##BC038214|C1orf53|388722|chromosome 1 open reading frame 53##NM_133494|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##AK313411|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	0.0	
chr17	79071299	79071413	reg1023424.p1	6.535	+	BC032559 BC014020 AB015019 AB015020 AB017119 AB017120 U70669 TSC_hg19_v1_chr17_+_79008989 BC002495 DQ893456 DQ896329 AB528742 CU680744 CU689422	-62351	+	TSC_hg19_v1_chr17_+_79008950 NM_001144888 NM_006340 NM_017450 NM_017451 AK298629 AK023688 AK222670 AK225612 AK297644	-62407	+	AK124762 TSC_hg19_v1_chr17_-_79008489 AK056555	-62909	-	AB014541 NM_004920 TSC_hg19_v1_chr17_-_79105774	34406	-	AK131529 NM_001080395 TSC_hg19_v1_chr17_-_79139926	68549	-	TSC_hg19_v1_chr17_-_79196766 BC136578 BC136580 BC144263 BC012130 NM_001009811 NM_014984 AB029041	125410	-	BC032559|BAIAP2|10458|BAI1-associated protein 2##BC014020|BAIAP2|10458|BAI1-associated protein 2##AB015019|BAIAP2|10458|BAI1-associated protein 2##AB015020|BAIAP2|10458|BAI1-associated protein 2##AB017119|BAIAP2|10458|BAI1-associated protein 2##AB017120|BAIAP2|10458|BAI1-associated protein 2##U70669|BAIAP2|10458|BAI1-associated protein 2##BC002495|BAIAP2|10458|BAI1-associated protein 2##DQ893456|BAIAP2|10458|BAI1-associated protein 2##DQ896329|BAIAP2|10458|BAI1-associated protein 2##NM_001144888|BAIAP2|10458|BAI1-associated protein 2##NM_006340|BAIAP2|10458|BAI1-associated protein 2##NM_017450|BAIAP2|10458|BAI1-associated protein 2##NM_017451|BAIAP2|10458|BAI1-associated protein 2##AK298629|BAIAP2|10458|BAI1-associated protein 2##AK023688|BAIAP2|10458|BAI1-associated protein 2##AK222670|BAIAP2|10458|BAI1-associated protein 2##AK225612|BAIAP2|10458|BAI1-associated protein 2##AK297644|BAIAP2|10458|BAI1-associated protein 2##AK124762|FLJ90757|440465|uncharacterized LOC440465##AK056555|FLJ90757|440465|uncharacterized LOC440465##AB014541|AATK|9625|apoptosis-associated tyrosine kinase##NM_004920|AATK|9625|apoptosis-associated tyrosine kinase##AK131529|AATK|9625|apoptosis-associated tyrosine kinase##NM_001080395|AATK|9625|apoptosis-associated tyrosine kinase##BC136578|AZI1|22994|5-azacytidine induced 1##BC136580|AZI1|22994|5-azacytidine induced 1##BC144263|AZI1|22994|5-azacytidine induced 1##BC012130|AZI1|22994|5-azacytidine induced 1##NM_001009811|AZI1|22994|5-azacytidine induced 1##NM_014984|AZI1|22994|5-azacytidine induced 1##AB029041|AZI1|22994|5-azacytidine induced 1	0.927161	CTCF.p2:12:0.927
chr4	154570750	154570874	reg1022103.p1	6.535	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-183320	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-304937	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-305025	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	34586	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	34618	+	TSC_hg19_v1_chr4_+_154605441 BC033756	34652	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.984411	CTCF.p2:5:0.984
chr7	129010797	129010929	reg1023678.p1	6.535	+	TSC_hg19_v1_chr7_+_129008062 AK025372	-2775	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	-2877	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	-146034	+	AK316073 NM_001130722	4620	+	TSC_hg19_v1_chr7_+_129074283 NM_001134336 NM_020704 AK290165 BC019064 AB032996 CU676366 AB463039 AM392619 AM392944 AM392960 AM393447	63410	+	BC050400 NM_001195243 BC035417	131501	+	AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001134336|FAM40B|57464|family with sequence similarity 40, member B##NM_020704|FAM40B|57464|family with sequence similarity 40, member B##AK290165|FAM40B|57464|family with sequence similarity 40, member B##BC019064|FAM40B|57464|family with sequence similarity 40, member B##AB032996|FAM40B|57464|family with sequence similarity 40, member B##AM392619|FAM40B|57464|family with sequence similarity 40, member B##AM392944|FAM40B|57464|family with sequence similarity 40, member B##AM392960|FAM40B|57464|family with sequence similarity 40, member B##AM393447|FAM40B|57464|family with sequence similarity 40, member B##BC050400|LOC100287482|100287482|uncharacterized LOC100287482##NM_001195243|LOC100287482|100287482|uncharacterized LOC100287482##BC035417|LOC100287482|100287482|uncharacterized LOC100287482	0.251787	CTCF.p2:13:0.252
chr11	128424097	128424203	reg1020946.p1	6.534	+	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	-32016	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	-32187	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1550845	+	BX640634 NM_001143820	33302	-	TSC_hg19_v1_chr11_+_128563793 NM_001167681 NM_002017	139648	+	TSC_hg19_v1_chr11_+_128563966 AK313370	139811	+	BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001167681|FLI1|2313|Friend leukemia virus integration 1##NM_002017|FLI1|2313|Friend leukemia virus integration 1##AK313370|FLI1|2313|Friend leukemia virus integration 1	0.731112	CTCF.p2:6:0.731
chr2	19550002	19550153	reg1023598.p1	6.534	+	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	-779267	-	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	-808161	-	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	-1490123	+	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	8302	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	518558	+	TSC_hg19_v1_chr2_-_20101456 BC050088	551351	-	AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946	0.99989	CTCF.p2:-30:1.000
chr8	105524902	105525035	reg1022946.p1	6.534	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	-45753	-	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	-172916	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	-693393	+	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	76207	-	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	76279	-	AF119334 BC109222 BC109223 NM_012082	806178	+	BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2	0.0	
chr10	124984728	124984836	reg1021481.p1	6.533	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-70426	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-70836	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-70884	+	AJ505757 NM_153442 BC112011 BC113462	441095	+	BC137492 BC146862 AY358565 NM_198148	666714	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	867117	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.899685	CTCF.p2:0:0.900
chr1	85439357	85439513	reg1019448.p1	6.533	+	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	-80549	-	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-283359	-	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-399329	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	23273	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	74710	-	TSC_hg19_v1_chr1_-_85514184 BX647497 AK314354 NM_001253693 NM_018298	74763	-	AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3##BX647497|MCOLN3|55283|mucolipin 3##AK314354|MCOLN3|55283|mucolipin 3##NM_001253693|MCOLN3|55283|mucolipin 3##NM_018298|MCOLN3|55283|mucolipin 3	0.542742	CTCF.p2:-23:0.543
chr3	39194389	39194536	reg1022523.p1	6.533	+	NM_001105513 NM_145755 AJ487015 BC062621 BC129948 AK022483 BC039691 AK302408 AK302465 CU687576	-45223	+	TSC_hg19_v1_chr3_-_39149122 BC075854 AK001574 AK057043 AJ409349 NM_031899 AK303847	-45336	-	CU687304 AB527597 TSC_hg19_v1_chr3_-_39149103 BC064624 AK300271 BC103826 BC103827 BC008928	-45391	-	TSC_hg19_v1_chr3_-_39195053 BC038949 AB053121 BC028213	589	-	NM_033027 TSC_hg19_v1_chr3_-_39195146	662	-	BC127119 BC139782 AY375160 NM_194293 TSC_hg19_v1_chr3_-_39234085 AJ626899 AJ626900 NM_001198621 AK096421 BX648565 CR749430	39623	-	NM_001105513|TTC21A|199223|tetratricopeptide repeat domain 21A##NM_145755|TTC21A|199223|tetratricopeptide repeat domain 21A##AJ487015|TTC21A|199223|tetratricopeptide repeat domain 21A##BC062621|TTC21A|199223|tetratricopeptide repeat domain 21A##BC129948|TTC21A|199223|tetratricopeptide repeat domain 21A##AK022483|TTC21A|199223|tetratricopeptide repeat domain 21A##BC039691|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302408|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302465|TTC21A|199223|tetratricopeptide repeat domain 21A##BC075854|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK001574|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK057043|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AJ409349|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##NM_031899|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK303847|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC064624|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK300271|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103826|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103827|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC008928|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC038949|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##AB053121|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC028213|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##NM_033027|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC127119|XIRP1|165904|xin actin-binding repeat containing 1##BC139782|XIRP1|165904|xin actin-binding repeat containing 1##AY375160|XIRP1|165904|xin actin-binding repeat containing 1##NM_194293|XIRP1|165904|xin actin-binding repeat containing 1##AJ626899|XIRP1|165904|xin actin-binding repeat containing 1##AJ626900|XIRP1|165904|xin actin-binding repeat containing 1##NM_001198621|XIRP1|165904|xin actin-binding repeat containing 1##AK096421|XIRP1|165904|xin actin-binding repeat containing 1##BX648565|XIRP1|165904|xin actin-binding repeat containing 1##CR749430|XIRP1|165904|xin actin-binding repeat containing 1	0.118921	
chr8	47579945	47580056	reg1024428.p1	6.533	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	-4432395	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-4584353	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-4584367	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	593495	+	TSC_hg19_v1_chr8_+_48173521 AK303579	593519	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	593532	+	AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146	0.967852	CTCF.p2:6:0.968
chr8	73856356	73856500	reg1023628.p1	6.533	+	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	-406785	+	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	-868594	-	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-1099720	-	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	64684	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	149014	-	BC150551 BC150552 NM_001243237	315308	-	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84##BC150551|LOC100130301|100130301|uncharacterized LOC100130301##BC150552|LOC100130301|100130301|uncharacterized LOC100130301##NM_001243237|LOC100130301|100130301|uncharacterized LOC100130301	0.999518	CTCF.p2:8:1.000
chr9	2146767	2146896	reg1021754.p1	6.533	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-131535	+	AF130729 NM_181872	-1096222	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-1096461	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	474976	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	475243	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	475281	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.985685	CTCF.p2:1:0.986
chr1	11397712	11397806	reg1020439.p2	6.532	+	TSC_hg19_v1_chr1_+_11333566 BC004468 BT006832	-64214	+	TSC_hg19_v1_chr1_+_11333254 AK222808 NM_013319 AK074890 AF117064	-64443	+	TSC_hg19_v1_chr1_-_11322609 NM_004958	-75152	-	TSC_hg19_v1_chr1_+_11539211 AB593117 AK311332 AB037758 NM_020780	141476	+	AB463629 CR542110 CU692940 DQ892848 DQ892849 DQ896095 TSC_hg19_v1_chr1_-_11714417	316647	-	AK055344 NM_183412	316672	+	BC004468|UBIAD1|29914|UbiA prenyltransferase domain containing 1##BT006832|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK222808|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_013319|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK074890|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AF117064|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_004958|MTOR|2475|mechanistic target of rapamycin (serine/threonine kinase)##AB593117|PTCHD2|57540|patched domain containing 2##AB037758|PTCHD2|57540|patched domain containing 2##NM_020780|PTCHD2|57540|patched domain containing 2##CR542110|FBXO2|26232|F-box protein 2##DQ892848|FBXO2|26232|F-box protein 2##DQ892849|FBXO2|26232|F-box protein 2##DQ896095|FBXO2|26232|F-box protein 2##AK055344|FBXO44|93611|F-box protein 44##NM_183412|FBXO44|93611|F-box protein 44	0.616114	CTCF.p2:-4:0.616
chr6_dbb_hap3	860691	860803	reg1021127.p1	6.532	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.57731	CTCF.p2:16:0.577
chr16	57897614	57897716	reg1019864.p1	6.531	+	TSC_hg19_v1_chr16_-_57836404 AK307846 BC001211 AK304132 NM_001130100 NM_005550	-61256	-	TSC_hg19_v1_chr16_-_57836370 AB209290	-61294	-	BC041132 AK299431 AK291737 NM_001130099	-65864	-	U58837 NM_001135639 NM_001297 U18945	107350	-	AY363222 AY363223 NM_199046 NM_199456 BC104458 BC104459	112677	+	AB037809 NM_020807	136096	-	AK307846|KIFC3|3801|kinesin family member C3##BC001211|KIFC3|3801|kinesin family member C3##AK304132|KIFC3|3801|kinesin family member C3##NM_001130100|KIFC3|3801|kinesin family member C3##NM_005550|KIFC3|3801|kinesin family member C3##AB209290|KIFC3|3801|kinesin family member C3##BC041132|KIFC3|3801|kinesin family member C3##AK299431|KIFC3|3801|kinesin family member C3##AK291737|KIFC3|3801|kinesin family member C3##NM_001130099|KIFC3|3801|kinesin family member C3##U58837|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001135639|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001297|CNGB1|1258|cyclic nucleotide gated channel beta 1##U18945|CNGB1|1258|cyclic nucleotide gated channel beta 1##AY363222|TEPP|374739|testis, prostate and placenta expressed##AY363223|TEPP|374739|testis, prostate and placenta expressed##NM_199046|TEPP|374739|testis, prostate and placenta expressed##NM_199456|TEPP|374739|testis, prostate and placenta expressed##BC104458|TEPP|374739|testis, prostate and placenta expressed##BC104459|TEPP|374739|testis, prostate and placenta expressed##AB037809|ZNF319|57567|zinc finger protein 319##NM_020807|ZNF319|57567|zinc finger protein 319	0.905258	CTCF.p2:1:0.905
chr11	121250007	121250136	reg1020920.p1	6.530	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	-86517	+	TSC_hg19_v1_chr11_+_121163484 AK096847 AK223141 AK222686	-86589	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	-86666	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	72878	+	TSC_hg19_v1_chr11_+_121323112 AK309523	73104	+	TSC_hg19_v1_chr11_+_121461071 AK294404	211027	+	BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK096847|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK223141|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK222686|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing	0.695846	CTCF.p2:29:0.696
chr19	35707867	35708018	reg1023915.p1	6.530	+	BC009642 TSC_hg19_v1_chr19_+_35646116	-61859	+	TSC_hg19_v1_chr19_+_35645641 AB072911 BC013834 NM_144779 AY358991 BC018798 AF161462 NM_001164605	-62200	+	TSC_hg19_v1_chr19_+_35645637 NM_014164 AK304012	-62316	+	BC039080 HQ258231 AK098526 NM_152481 BC117457 BC117459	11662	-	TSC_hg19_v1_chr19_+_35739294 AK126834	31349	+	TSC_hg19_v1_chr19_+_35739638 NM_015925 NM_205834 NM_205835 BC047376	31672	+	BC009642|FXYD5|53827|FXYD domain containing ion transport regulator 5##AB072911|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC013834|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_144779|FXYD5|53827|FXYD domain containing ion transport regulator 5##AY358991|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC018798|FXYD5|53827|FXYD domain containing ion transport regulator 5##AF161462|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_001164605|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_014164|FXYD5|53827|FXYD domain containing ion transport regulator 5##AK304012|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC039080|FAM187B|148109|family with sequence similarity 187, member B##HQ258231|FAM187B|148109|family with sequence similarity 187, member B##AK098526|FAM187B|148109|family with sequence similarity 187, member B##NM_152481|FAM187B|148109|family with sequence similarity 187, member B##BC117457|FAM187B|148109|family with sequence similarity 187, member B##BC117459|FAM187B|148109|family with sequence similarity 187, member B##AK126834|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_015925|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_205834|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_205835|LSR|51599|lipolysis stimulated lipoprotein receptor##BC047376|LSR|51599|lipolysis stimulated lipoprotein receptor	0.990184	CTCF.p2:27:0.990
chr6	137523352	137523484	reg1019754.p2	6.530	+	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	-28667	-	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	-157173	-	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	-157580	-	TSC_hg19_v1_chr6_-_137540496 BT006814 AB527981 CU675119 AF056979 AK294252	17050	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	17094	-	TSC_hg19_v1_chr6_-_137540544 BC005333	17127	-	AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2##AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##BT006814|IFNGR1|3459|interferon gamma receptor 1##AF056979|IFNGR1|3459|interferon gamma receptor 1##AK294252|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1	0.165507	
chr8	19981338	19981461	reg1022818.p1	6.530	+	TSC_hg19_v1_chr8_+_19796933 AB384743 BT006726 CR457054 DQ893541 DQ893751	-184459	+	X14390 TSC_hg19_v1_chr8_+_19796864 BC011353	-184534	+	TSC_hg19_v1_chr8_+_19796763 AK092286 AK290290 AK222464 AK312311 M15856 X54516	-184630	+	AK313720 BC006317 BC009387 NM_001135691 NM_001142324 NM_001142325 NM_003053 U39905	59265	-	NM_001693 TSC_hg19_v1_chr8_+_20054882	73393	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	73494	+	BT006726|LPL|4023|lipoprotein lipase##CR457054|LPL|4023|lipoprotein lipase##DQ893541|LPL|4023|lipoprotein lipase##DQ893751|LPL|4023|lipoprotein lipase##X14390|LPL|4023|lipoprotein lipase##BC011353|LPL|4023|lipoprotein lipase##AK092286|LPL|4023|lipoprotein lipase##AK290290|LPL|4023|lipoprotein lipase##AK222464|LPL|4023|lipoprotein lipase##AK312311|LPL|4023|lipoprotein lipase##M15856|LPL|4023|lipoprotein lipase##X54516|LPL|4023|lipoprotein lipase##AK313720|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##BC006317|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##BC009387|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001135691|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001142324|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001142325|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_003053|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##U39905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001693|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2	0.175885	
chr17	1786219	1786329	reg1020778.p2	6.529	+	TSC_hg19_v1_chr17_+_1733335 M63488 AB209732 BC018126 AB385027 HQ258560	-52925	+	TSC_hg19_v1_chr17_+_1733284 NM_002945 AK289704	-52990	+	TSC_hg19_v1_chr17_-_1733157 BC035077 AK095369 NM_052928	-53136	-	BC128608 NM_178568	141903	-	TSC_hg19_v1_chr17_+_1933446 S81752 U34880 AF321876 NM_001383 AK314015 BC096086 BC096087 BC096088 BC096089 BC003099	147147	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	159034	+	M63488|RPA1|6117|replication protein A1, 70kDa##AB209732|RPA1|6117|replication protein A1, 70kDa##BC018126|RPA1|6117|replication protein A1, 70kDa##HQ258560|RPA1|6117|replication protein A1, 70kDa##NM_002945|RPA1|6117|replication protein A1, 70kDa##AK289704|RPA1|6117|replication protein A1, 70kDa##BC035077|SMYD4|114826|SET and MYND domain containing 4##AK095369|SMYD4|114826|SET and MYND domain containing 4##NM_052928|SMYD4|114826|SET and MYND domain containing 4##BC128608|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_178568|RTN4RL1|146760|reticulon 4 receptor-like 1##S81752|DPH1|1801|DPH1 homolog (S. cerevisiae)##U34880|DPH1|1801|DPH1 homolog (S. cerevisiae)##AF321876|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_001383|DPH1|1801|DPH1 homolog (S. cerevisiae)##AK314015|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096086|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096087|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096088|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096089|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC003099|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2	0.814405	CTCF.p2:-2:0.814
chr17	43094330	43094461	reg1024391.p1	6.529	+	TSC_hg19_v1_chr17_-_43045715 BC008798 NM_006688	-48697	-	TSC_hg19_v1_chr17_-_43025057 NM_001080443	-69333	-	BC062609 AB463686 J04569 BC013596 AF419299 BC041765 AK128790 TSC_hg19_v1_chr17_-_42992869 AK098380 AK098758 AK222683 AK295734 AK296259 AK303728 S40719 AK315398 NM_001131019 NM_001242376 NM_002055	-101510	-	TSC_hg19_v1_chr17_-_43128979 AK290755 NM_001128631 AK026608	34534	-	TSC_hg19_v1_chr17_-_43138397 BC006472 BC006546 NM_024819	44017	-	TSC_hg19_v1_chr17_+_43138673 Y17208 Y17209	44262	+	BC008798|C1QL1|10882|complement component 1, q subcomponent-like 1##NM_006688|C1QL1|10882|complement component 1, q subcomponent-like 1##NM_001080443|KIF18B|146909|kinesin family member 18B##BC062609|GFAP|2670|glial fibrillary acidic protein##J04569|GFAP|2670|glial fibrillary acidic protein##BC013596|GFAP|2670|glial fibrillary acidic protein##AF419299|GFAP|2670|glial fibrillary acidic protein##BC041765|GFAP|2670|glial fibrillary acidic protein##AK128790|GFAP|2670|glial fibrillary acidic protein##AK098380|GFAP|2670|glial fibrillary acidic protein##AK098758|GFAP|2670|glial fibrillary acidic protein##AK222683|GFAP|2670|glial fibrillary acidic protein##AK295734|GFAP|2670|glial fibrillary acidic protein##AK296259|GFAP|2670|glial fibrillary acidic protein##AK303728|GFAP|2670|glial fibrillary acidic protein##S40719|GFAP|2670|glial fibrillary acidic protein##AK315398|GFAP|2670|glial fibrillary acidic protein##NM_001131019|GFAP|2670|glial fibrillary acidic protein##NM_001242376|GFAP|2670|glial fibrillary acidic protein##NM_002055|GFAP|2670|glial fibrillary acidic protein##AK290755|DCAKD|79877|dephospho-CoA kinase domain containing##NM_001128631|DCAKD|79877|dephospho-CoA kinase domain containing##AK026608|DCAKD|79877|dephospho-CoA kinase domain containing##BC006472|DCAKD|79877|dephospho-CoA kinase domain containing##BC006546|DCAKD|79877|dephospho-CoA kinase domain containing##NM_024819|DCAKD|79877|dephospho-CoA kinase domain containing##Y17208|NMT1|4836|N-myristoyltransferase 1##Y17209|NMT1|4836|N-myristoyltransferase 1	0.742353	CTCF.p2:4:0.703
chr1	112901557	112901654	reg1018375.p1	6.528	+	AY863198 AF120491 NM_004980 NM_172198	-369883	-	TSC_hg19_v1_chr1_+_112298524 AK301697 AK001506 BC031062 BC011556 AF106019 AF155803 AK314312 DQ892249 DQ895449 CU679958	-603056	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	-603170	-	NM_018704 TSC_hg19_v1_chr1_+_112938844 AK023340	37221	+	TSC_hg19_v1_chr1_+_112938871 BC016029 AK022544 AK092791 AX747733	37263	+	AB045116 NM_004185	108434	+	AF120491|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_004980|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_172198|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##AK301697|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK001506|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC031062|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC011556|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF106019|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF155803|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK314312|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ892249|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ895449|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B##NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like##BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK092791|LOC100129406|100129406|uncharacterized LOC100129406##AB045116|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_004185|WNT2B|7482|wingless-type MMTV integration site family, member 2B	0.994225	CTCF.p2:-8:0.994
chr1	32327127	32327222	reg1019512.p1	6.528	+	BC114430 AK131447 NM_144569 AK091016 AX746730	-45575	-	TSC_hg19_v1_chr1_-_32264318 AK095829	-62853	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	-62934	-	NM_001195100 NM_001195101	58084	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	76757	-	TSC_hg19_v1_chr1_-_32403992 NM_080391	76823	-	BC114430|SPOCD1|90853|SPOC domain containing 1##AK131447|SPOCD1|90853|SPOC domain containing 1##NM_144569|SPOCD1|90853|SPOC domain containing 1##AK091016|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2	0.021461	
chr13	95313097	95313250	reg1021637.p2	6.528	+	TSC_hg19_v1_chr13_+_95254110 NM_180989 BC033906 BC052243 AK126794	-59071	+	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	-64677	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	-64744	-	X65666 X71136 AB464716 NM_007084	51145	-	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	640539	-	NM_001160100 NM_182848 AK055855	772681	+	NM_180989|GPR180|160897|G protein-coupled receptor 180##BC033906|GPR180|160897|G protein-coupled receptor 180##BC052243|GPR180|160897|G protein-coupled receptor 180##AK126794|GPR180|160897|G protein-coupled receptor 180##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase##X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10	0.283295	CTCF.p2:-42:0.283
chr19	51040999	51041101	reg1005685.p1	6.528	+	CU688154 TSC_hg19_v1_chr19_-_51017942 BC066359 NM_001024656	-23185	-	TSC_hg19_v1_chr19_-_51017156 NM_001114598	-23895	-	AF247787 NM_138334 TSC_hg19_v1_chr19_-_51014412 BC051380 BC062416 AK131052	-26640	-	BC131897 NM_001080457	30240	-	AL136594 NM_032298	100251	-	NM_001160328 NM_001160329 BC031067 BC028379 TSC_hg19_v1_chr19_-_51143094	102075	-	BC066359|ASPDH|554235|aspartate dehydrogenase domain containing##NM_001024656|ASPDH|554235|aspartate dehydrogenase domain containing##NM_001114598|ASPDH|554235|aspartate dehydrogenase domain containing##AF247787|JOSD2|126119|Josephin domain containing 2##NM_138334|JOSD2|126119|Josephin domain containing 2##BC051380|JOSD2|126119|Josephin domain containing 2##BC062416|JOSD2|126119|Josephin domain containing 2##AK131052|JOSD2|126119|Josephin domain containing 2##BC131897|LRRC4B|94030|leucine rich repeat containing 4B##NM_001080457|LRRC4B|94030|leucine rich repeat containing 4B##AL136594|SYT3|84258|synaptotagmin III##NM_032298|SYT3|84258|synaptotagmin III##NM_001160328|SYT3|84258|synaptotagmin III##NM_001160329|SYT3|84258|synaptotagmin III##BC031067|SYT3|84258|synaptotagmin III##BC028379|SYT3|84258|synaptotagmin III	0.265018	CTCF.p2:18:0.265
chr6	131164806	131164927	reg1021908.p1	6.528	+	BC113027 NM_001195597 AK091900 AX747243 BC101422 BC101423 BC101424 BC101425 BC113026 TSC_hg19_v1_chr6_+_131148577	-16304	+	AB052099 NM_052913	-406605	+	AK091882 AX747235 NM_001017373	-620768	-	TSC_hg19_v1_chr6_-_131291480 AK307764 NM_001199389	126685	-	CR749262 CR936793 NM_001252660	157021	-	AF027299 TSC_hg19_v1_chr6_-_131384381 BC034718 AB209522	219485	-	BC113027|LOC100507203|100507203|uncharacterized LOC100507203##NM_001195597|LOC100507203|100507203|uncharacterized LOC100507203##AK091900|LOC100507203|100507203|uncharacterized LOC100507203##BC101422|LOC100507203|100507203|uncharacterized LOC100507203##BC101423|LOC100507203|100507203|uncharacterized LOC100507203##BC101424|LOC100507203|100507203|uncharacterized LOC100507203##BC101425|LOC100507203|100507203|uncharacterized LOC100507203##BC113026|LOC100507203|100507203|uncharacterized LOC100507203##AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A##AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AF027299|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##BC034718|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AB209522|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	0.06353	
chr1	170640584	170640765	reg1021213.p2	6.527	+	BC074993 NM_006902 NM_022716 EU446648 AB527492 AB451463 TSC_hg19_v1_chr1_+_170633380 M95929	-7312	+	TSC_hg19_v1_chr1_+_170632302 AK225968	-8384	+	TSC_hg19_v1_chr1_+_170501309 AK308339 NM_001146039 NM_152281 AK021814 BC064945 CU687974 BC047476 AK057661	-139371	+	NM_001163629 NM_025063 AK027203 BC113390 BC113392	263973	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	419367	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	513748	+	BC074993|PRRX1|5396|paired related homeobox 1##NM_006902|PRRX1|5396|paired related homeobox 1##NM_022716|PRRX1|5396|paired related homeobox 1##EU446648|PRRX1|5396|paired related homeobox 1##AB451463|PRRX1|5396|paired related homeobox 1##AK225968|PRRX1|5396|paired related homeobox 1##AK308339|GORAB|92344|golgin, RAB6-interacting##NM_001146039|GORAB|92344|golgin, RAB6-interacting##NM_152281|GORAB|92344|golgin, RAB6-interacting##AK021814|GORAB|92344|golgin, RAB6-interacting##BC064945|GORAB|92344|golgin, RAB6-interacting##BC047476|GORAB|92344|golgin, RAB6-interacting##AK057661|GORAB|92344|golgin, RAB6-interacting##NM_001163629|C1orf129|80133|chromosome 1 open reading frame 129##NM_025063|C1orf129|80133|chromosome 1 open reading frame 129##AK027203|C1orf129|80133|chromosome 1 open reading frame 129##BC113390|C1orf129|80133|chromosome 1 open reading frame 129##BC113392|C1orf129|80133|chromosome 1 open reading frame 129##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	0.155734	
chr11	102405359	102405470	reg1021405.p2	6.526	+	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	-3955	-	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-81801	-	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-187386	+	AB527354 NM_004771 Y12779	90641	-	AB527320 AF195192 AY358752 NM_022122	171041	-	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	190239	-	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	0.553605	CTCF.p2:0:0.554
chr18	19069244	19069344	reg1021751.p1	6.526	+	TSC_hg19_v1_chr18_+_18822192 AB051559 NM_001142966 BC125017	-247051	+	TSC_hg19_v1_chr18_-_18691765 AK057038 NM_005406	-377506	-	TSC_hg19_v1_chr18_-_18691640 AK307388	-377656	-	TSC_hg19_v1_chr18_-_19180616 AB067498	111325	-	TSC_hg19_v1_chr18_-_19180666 NM_052911 AK096746	111384	-	TSC_hg19_v1_chr18_-_19180830 AL832041	111582	-	AB051559|GREB1L|80000|growth regulation by estrogen in breast cancer-like##NM_001142966|GREB1L|80000|growth regulation by estrogen in breast cancer-like##BC125017|GREB1L|80000|growth regulation by estrogen in breast cancer-like##AK057038|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##NM_005406|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AK307388|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AB067498|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##NM_052911|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##AK096746|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##AL832041|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)	0.704023	CTCF.p2:-16:0.704
chr11	62148357	62148457	reg1020333.p1	6.525	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	-43459	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	-43582	+	HQ258026 AY236538 BC130639 BC130645 AY359052 NM_206998	-81898	-	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	38129	+	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	165829	-	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	165907	-	AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##HQ258026|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY236538|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130639|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130645|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY359052|SCGB1D4|404552|secretoglobin, family 1D, member 4##NM_206998|SCGB1D4|404552|secretoglobin, family 1D, member 4##AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein	1.118596	CTCF.p2:-5:0.994
chr6	13454933	13455113	reg1022283.p2	6.525	+	AK027010 NM_001242630	-46655	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	-126323	-	AK091836 AX747210 NM_001242698	-159206	-	AK055131 AF264036 NM_001242628	31375	-	TSC_hg19_v1_chr6_-_13487051 BC148295 BC119005 BC124557	32074	-	TSC_hg19_v1_chr6_-_13487810 AK000337 NM_001242629 NM_018988	32835	-	AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AK055131|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF264036|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242628|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC148295|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC119005|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC124557|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AK000337|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242629|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_018988|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.889502	CTCF.p2:-17:0.890
chr4	26321269	26321427	reg1023475.p2	6.524	+	L07875 BC020780 NM_005349 NM_203283	-29	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-405484	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-456794	-	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	961	+	TSC_hg19_v1_chr4_+_26322635 AK302230	1288	+	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	1334	+	L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.013239	
chr11	11988502	11988627	reg1021833.p1	6.523	+	TSC_hg19_v1_chr11_+_11863521 BC071559 AK027362 AK092290 AX747455	-124996	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	-125073	+	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	-125548	+	AY587550 DQ892906 DQ896157 AK295441 AK225156 TSC_hg19_v1_chr11_-_12030174 AB033421 AF177396 AK092979 AK098756 NM_001018057	41592	-	TSC_hg19_v1_chr11_-_12030604 AB034203	42010	-	TSC_hg19_v1_chr11_-_12030622 BC007660 NM_015881	42061	-	BC071559|USP47|55031|ubiquitin specific peptidase 47##AK027362|USP47|55031|ubiquitin specific peptidase 47##AK092290|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AY587550|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##DQ892906|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##DQ896157|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK295441|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK225156|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AB033421|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AF177396|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK092979|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK098756|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_001018057|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AB034203|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##BC007660|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_015881|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)	0.725291	CTCF.p2:8:0.725
chr17	73400341	73400489	reg1022047.p1	6.523	+	AB385058 AF498925 CR450363 CR541942 DQ891830 DQ894923 CU674310 L29511 TSC_hg19_v1_chr17_-_73389844	-10638	-	TSC_hg19_v1_chr17_-_73285501 AK075239 NM_001126121 NM_001126122 NM_021734	-114886	-	BC001075 BC005120 TSC_hg19_v1_chr17_-_73285471 AL833387	-114943	-	AK091010 TSC_hg19_v1_chr17_-_73401721	1229	-	TSC_hg19_v1_chr17_-_73401738 BC000631	1319	-	TSC_hg19_v1_chr17_-_73401781 AK315565	1364	-	AF498925|GRB2|2885|growth factor receptor-bound protein 2##CR450363|GRB2|2885|growth factor receptor-bound protein 2##CR541942|GRB2|2885|growth factor receptor-bound protein 2##DQ891830|GRB2|2885|growth factor receptor-bound protein 2##DQ894923|GRB2|2885|growth factor receptor-bound protein 2##L29511|GRB2|2885|growth factor receptor-bound protein 2##AK075239|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126121|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126122|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_021734|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC001075|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC005120|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AL833387|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AK091010|GRB2|2885|growth factor receptor-bound protein 2##BC000631|GRB2|2885|growth factor receptor-bound protein 2##AK315565|GRB2|2885|growth factor receptor-bound protein 2	0.0	
chr3	51137807	51137932	reg1022258.p1	6.523	+	AY254099 NM_004947 AY145303	-425187	+	TSC_hg19_v1_chr3_+_50654932 AK313565 U43784 AB528893 EU832627 EU832702 CU675717 AB451303 AB451434	-482937	+	BC001662 BC010407 TSC_hg19_v1_chr3_+_50654611 BC007591 U09578	-483242	+	NM_006010 TSC_hg19_v1_chr3_+_51422691	284822	+	TSC_hg19_v1_chr3_+_51422721 BC113588 BC113590 AK292243 BC007282 BT007110 EU832655 EU832733 BC033055	284912	+	NM_013286 TSC_hg19_v1_chr3_+_51428706	290833	+	AY254099|DOCK3|1795|dedicator of cytokinesis 3##NM_004947|DOCK3|1795|dedicator of cytokinesis 3##AY145303|DOCK3|1795|dedicator of cytokinesis 3##AK313565|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U43784|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832627|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832702|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451303|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451434|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC001662|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC010407|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC007591|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U09578|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##NM_006010|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113588|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113590|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AK292243|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC007282|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BT007110|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832655|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832733|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC033055|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##NM_013286|RBM15B|29890|RNA binding motif protein 15B	0.974686	CTCF.p2:2:0.975
chr12	113591181	113591325	reg1024974.p1	6.522	+	AK308987 NM_001144872	-3649	+	AF086713 AB208935 AK294350 NM_001193520 NM_004658	-17222	-	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	-17841	-	BC005848 BC001132 BC001848 AY148094 TSC_hg19_v1_chr12_-_113623279 AF478457 NM_001111322 NM_024072	31994	-	AK075358 AK123762 AK027741 TSC_hg19_v1_chr12_+_113623525 AY007158 AK027733 NM_032848 AK222908	32220	+	TSC_hg19_v1_chr12_-_113658844 BC013151 NM_138451 AK127152	67609	-	NM_001144872|CCDC42B|387885|coiled-coil domain containing 42B##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC005848|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##BC001132|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##BC001848|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AY148094|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AF478457|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_001111322|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_024072|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AK075358|C12orf52|84934|chromosome 12 open reading frame 52##AK123762|C12orf52|84934|chromosome 12 open reading frame 52##AK027741|C12orf52|84934|chromosome 12 open reading frame 52##AY007158|C12orf52|84934|chromosome 12 open reading frame 52##AK027733|C12orf52|84934|chromosome 12 open reading frame 52##NM_032848|C12orf52|84934|chromosome 12 open reading frame 52##AK222908|C12orf52|84934|chromosome 12 open reading frame 52##BC013151|IQCD|115811|IQ motif containing D##NM_138451|IQCD|115811|IQ motif containing D##AK127152|IQCD|115811|IQ motif containing D	0.059184	
chr4	175635672	175635785	reg1021529.p1	6.522	+	AK300524 NM_000860 NM_001145816	-191937	-	U63296 X82460 BC007691 BC018986 J05594 L76465 AK058013 AK300940 AK314624 AK300125 TSC_hg19_v1_chr4_-_175443639	-192108	-	BC014903 NM_012180 AK123740	-430321	-	U93917 BC036086 NM_001042543 NM_006529	114692	-	NM_001130703 NM_001130704 NM_001130705 NM_014269 AK292410 BC036070	203805	+	CU692222 CU692662 DQ892372 DQ895581 TSC_hg19_v1_chr4_-_176733403	1097665	-	AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##U63296|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##X82460|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC007691|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC018986|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##J05594|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##L76465|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK058013|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300940|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK314624|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##AK300125|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##BC014903|FBXO8|26269|F-box protein 8##NM_012180|FBXO8|26269|F-box protein 8##AK123740|FBXO8|26269|F-box protein 8##U93917|GLRA3|8001|glycine receptor, alpha 3##BC036086|GLRA3|8001|glycine receptor, alpha 3##NM_001042543|GLRA3|8001|glycine receptor, alpha 3##NM_006529|GLRA3|8001|glycine receptor, alpha 3##NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29##NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29##AK292410|ADAM29|11086|ADAM metallopeptidase domain 29##BC036070|ADAM29|11086|ADAM metallopeptidase domain 29##DQ892372|GPM6A|2823|glycoprotein M6A##DQ895581|GPM6A|2823|glycoprotein M6A	0.965178	CTCF.p2:16:0.940
chr16	53095745	53095925	reg1021518.p1	6.521	+	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	-6954	+	AK299202 NM_001146188	-514122	-	NM_001080430	-515030	-	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	37264	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	69225	+	NM_001207030	309205	-	AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_001207030|LOC643802|643802|u3 small nucleolar ribonucleoprotein protein MPP10-like	0.0	
chr1	76308331	76308445	reg1020979.p1	6.521	+	NM_002440 BC033030 U89293 AF104243 AB528458 CU689598 DQ891259 DQ894445	-45776	+	AK293057 AK128861 BC020790 NM_004582 TSC_hg19_v1_chr1_+_76251940	-56475	+	AK312629 TSC_hg19_v1_chr1_+_76190445 AK296045 AK311022 M16827 AF251043 DQ892341 DQ895710 CU675151	-117932	+	AF403035 CU691378 BC022517 AF429968 BC036573 AK098606 NM_080868	89657	-	TSC_hg19_v1_chr1_+_76540430 NM_001160011 NM_152996 AK091215 AX746855 BC059363 AK297363 AY358540 AJ507291 CU691350	232074	+	TSC_hg19_v1_chr1_+_77165439 D28460	857052	+	NM_002440|MSH4|4438|mutS homolog 4 (E. coli)##BC033030|MSH4|4438|mutS homolog 4 (E. coli)##U89293|MSH4|4438|mutS homolog 4 (E. coli)##AF104243|MSH4|4438|mutS homolog 4 (E. coli)##DQ891259|MSH4|4438|mutS homolog 4 (E. coli)##DQ894445|MSH4|4438|mutS homolog 4 (E. coli)##AK293057|RABGGTB|5876|Rab geranylgeranyltransferase, beta subunit##AK128861|RABGGTB|5876|Rab geranylgeranyltransferase, beta subunit##BC020790|RABGGTB|5876|Rab geranylgeranyltransferase, beta subunit##NM_004582|RABGGTB|5876|Rab geranylgeranyltransferase, beta subunit##AK312629|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AK296045|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AK311022|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##M16827|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AF251043|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##DQ892341|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##DQ895710|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17##AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17##AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##D28460|TPI1|7167|triosephosphate isomerase 1	0.830069	CTCF.p2:-13:0.830
chr2	97748198	97748314	reg1020642.p2	6.521	+	NM_001122646	-95956	-	BC038583 BC051379 NM_016490	-184407	-	AF151068 NM_001172667	-187380	-	TSC_hg19_v1_chr2_-_97760578 AK295056 BC064511 NM_199336	12335	-	AY358571 NM_001164315 BX647769 TSC_hg19_v1_chr2_+_97779310 AK304740 AK316541 AK307629 BC046186 BC128262 BC128517 CU692324	31097	+	CU687166 TSC_hg19_v1_chr2_-_98206176	457906	-	NM_001122646|FAM178B|51252|family with sequence similarity 178, member B##BC038583|FAM178B|51252|family with sequence similarity 178, member B##BC051379|FAM178B|51252|family with sequence similarity 178, member B##NM_016490|FAM178B|51252|family with sequence similarity 178, member B##AF151068|FAM178B|51252|family with sequence similarity 178, member B##NM_001172667|FAM178B|51252|family with sequence similarity 178, member B##AK295056|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##BC064511|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##NM_199336|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##AY358571|ANKRD36|375248|ankyrin repeat domain 36##NM_001164315|ANKRD36|375248|ankyrin repeat domain 36##BX647769|ANKRD36|375248|ankyrin repeat domain 36##AK304740|ANKRD36|375248|ankyrin repeat domain 36##AK316541|ANKRD36|375248|ankyrin repeat domain 36##AK307629|ANKRD36|375248|ankyrin repeat domain 36##BC046186|ANKRD36|375248|ankyrin repeat domain 36##BC128262|ANKRD36|375248|ankyrin repeat domain 36##BC128517|ANKRD36|375248|ankyrin repeat domain 36	0.502888	CTCF.p2:11:0.503
chr8	110225873	110225999	reg1021599.p1	6.521	+	BC105045 BC113360 NM_003301 X72089 D16845 AY493373 HQ258206 X75071	-126240	+	AK055230 NM_153015 BC033057 BC030710	-426130	-	TSC_hg19_v1_chr8_+_109455874 AK290974 D14659 AB384437 CR457402 CU676696 CU692380 HQ447150	-770056	+	AF283302 AK311583 AF521133 NM_001128211 AK307663	116198	-	AK301278 TSC_hg19_v1_chr8_-_110346317 BC000967 AK027897 BC043406 AK315006 BC031258 NM_032869 AF283301	120435	-	TSC_hg19_v1_chr8_+_110346575 NM_001193557 NM_020189 AK095651 AK316560 AK000487 AK290752 BC051878 BC007870	120657	+	BC105045|TRHR|7201|thyrotropin-releasing hormone receptor##BC113360|TRHR|7201|thyrotropin-releasing hormone receptor##NM_003301|TRHR|7201|thyrotropin-releasing hormone receptor##X72089|TRHR|7201|thyrotropin-releasing hormone receptor##D16845|TRHR|7201|thyrotropin-releasing hormone receptor##AY493373|TRHR|7201|thyrotropin-releasing hormone receptor##HQ258206|TRHR|7201|thyrotropin-releasing hormone receptor##X75071|TRHR|7201|thyrotropin-releasing hormone receptor##AK055230|TMEM74|157753|transmembrane protein 74##NM_153015|TMEM74|157753|transmembrane protein 74##BC030710|TMEM74|157753|transmembrane protein 74##AK290974|TTC35|9694|tetratricopeptide repeat domain 35##D14659|TTC35|9694|tetratricopeptide repeat domain 35##CR457402|TTC35|9694|tetratricopeptide repeat domain 35##HQ447150|TTC35|9694|tetratricopeptide repeat domain 35##AF283302|NUDCD1|84955|NudC domain containing 1##AK311583|NUDCD1|84955|NudC domain containing 1##AF521133|NUDCD1|84955|NudC domain containing 1##NM_001128211|NUDCD1|84955|NudC domain containing 1##AK307663|NUDCD1|84955|NudC domain containing 1##AK301278|NUDCD1|84955|NudC domain containing 1##BC000967|NUDCD1|84955|NudC domain containing 1##AK027897|NUDCD1|84955|NudC domain containing 1##BC043406|NUDCD1|84955|NudC domain containing 1##AK315006|NUDCD1|84955|NudC domain containing 1##BC031258|NUDCD1|84955|NudC domain containing 1##NM_032869|NUDCD1|84955|NudC domain containing 1##AF283301|NUDCD1|84955|NudC domain containing 1##NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	0.830069	CTCF.p2:-4:0.830
chr11	69008314	69008423	reg1021206.p2	6.520	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-150842	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-191942	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-192018	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	53254	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	447488	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	447542	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.99569	CTCF.p2:-14:0.996
chr13	73383194	73383310	reg1022290.p1	6.520	+	TSC_hg19_v1_chr13_+_73356270 NM_006346 AK309828 BC006009 BC008432 BC041806 BC051911 AY370776 AY375528	-26942	+	BC056143 TSC_hg19_v1_chr13_-_73356083 AK314715 BC038101 NM_001128226 NM_014953	-27046	-	AL832266 TSC_hg19_v1_chr13_-_73356067 AB023225 BC012468	-27190	-	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	249952	+	AF161471 AF113122 NM_007249	1324737	-	TSC_hg19_v1_chr13_-_74708425 AK291397	1325144	-	NM_006346|PIBF1|10464|progesterone immunomodulatory binding factor 1##AK309828|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC006009|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC008432|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC041806|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC051911|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY370776|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY375528|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC056143|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AK314715|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##BC038101|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_001128226|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_014953|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AL832266|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AB023225|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##BC012468|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK291397|KLF12|11278|Kruppel-like factor 12	0.987204	CTCF.p2:0:0.987
chr3	51834052	51834159	reg1020780.p1	6.520	+	NM_001143833	-20903	-	NM_000839 NM_001130063 AK315816 AK289984 AK313056 BC041447	-93013	+	NM_001129884 NM_001243727 NM_015926 TSC_hg19_v1_chr3_+_51705247 AK023997 AK222938 AK222949 BC008742 NM_001243725 NM_001243726 AY358972 BC001592	-128839	+	BC146874 BC146889 BC171811 BC171818 NM_001085479 NM_001207023	26793	+	AK128883 NM_203424 BC040047 CU691808	61557	+	NM_001145059	75494	-	NM_001143833|IQCF6|440956|IQ motif containing F6##NM_000839|GRM2|2912|glutamate receptor, metabotropic 2##NM_001130063|GRM2|2912|glutamate receptor, metabotropic 2##AK315816|GRM2|2912|glutamate receptor, metabotropic 2##AK289984|GRM2|2912|glutamate receptor, metabotropic 2##AK313056|GRM2|2912|glutamate receptor, metabotropic 2##BC041447|GRM2|2912|glutamate receptor, metabotropic 2##NM_001129884|TEX264|51368|testis expressed 264##NM_001243727|TEX264|51368|testis expressed 264##NM_015926|TEX264|51368|testis expressed 264##AK023997|TEX264|51368|testis expressed 264##AK222938|TEX264|51368|testis expressed 264##AK222949|TEX264|51368|testis expressed 264##BC008742|TEX264|51368|testis expressed 264##NM_001243725|TEX264|51368|testis expressed 264##NM_001243726|TEX264|51368|testis expressed 264##AY358972|TEX264|51368|testis expressed 264##BC001592|TEX264|51368|testis expressed 264##BC146874|IQCF3|401067|IQ motif containing F3##BC146889|IQCF3|401067|IQ motif containing F3##BC171811|IQCF3|401067|IQ motif containing F3##BC171818|IQCF3|401067|IQ motif containing F3##NM_001085479|IQCF3|401067|IQ motif containing F3##NM_001207023|IQCF3|401067|IQ motif containing F3##AK128883|IQCF2|389123|IQ motif containing F2##NM_203424|IQCF2|389123|IQ motif containing F2##BC040047|IQCF2|389123|IQ motif containing F2##NM_001145059|IQCF5|389124|IQ motif containing F5	0.106124	
chr5	157167389	157167511	reg1021154.p2	6.520	+	AY463216 NM_017872 TSC_hg19_v1_chr5_+_157158427 AK000553 AK223119 AK304590 BC023521 AL136669 AK021663 AB528251 AM392629 CR533503 BC001523 BC001852 CU674750	-9022	+	NM_001145132	-68890	+	BC035142 AK055284 TSC_hg19_v1_chr5_-_157098473 AK302162	-68985	-	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	3290	+	AK055297 TSC_hg19_v1_chr5_+_157184422	16930	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	118640	-	AY463216|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##NM_017872|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK000553|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK223119|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK304590|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC023521|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AL136669|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK021663|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##CR533503|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001523|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001852|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##NM_001145132|C5orf52|100190949|chromosome 5 open reading frame 52##AK302162|SOX30|11063|SRY (sex determining region Y)-box 30##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1	0.938488	CTCF.p2:-7:0.938
chr16	50361104	50361216	reg1024119.p1	6.519	+	NM_001114 D25538	-39337	+	TSC_hg19_v1_chr16_+_50308041 BC039891	-53107	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	-60684	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	41670	-	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	221166	+	TSC_hg19_v1_chr16_-_50647562 AK124375	286418	-	NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##AK093706|ADCY7|113|adenylate cyclase 7##AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)	0.523606	CTCF.p2:-24:0.524
chr3	160204273	160204439	reg1021984.p2	6.519	+	TSC_hg19_v1_chr3_-_160167605 BC109259 BC109260 BC033011 BC068444 AY159379 NM_173084	-36733	-	TSC_hg19_v1_chr3_-_160167549 AK291284	-36819	-	NM_005496 AL136877	-85992	+	CU689904 AB002533 DQ890866 DQ894021 TSC_hg19_v1_chr3_-_160283092	78738	-	TSC_hg19_v1_chr3_-_160283202 U93240	78836	-	TSC_hg19_v1_chr3_-_160283329 BC028691 AK291041	78964	-	BC109259|TRIM59|286827|tripartite motif containing 59##BC109260|TRIM59|286827|tripartite motif containing 59##AY159379|TRIM59|286827|tripartite motif containing 59##NM_173084|TRIM59|286827|tripartite motif containing 59##AK291284|TRIM59|286827|tripartite motif containing 59##NM_005496|SMC4|10051|structural maintenance of chromosomes 4##AL136877|SMC4|10051|structural maintenance of chromosomes 4##AB002533|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##DQ890866|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##DQ894021|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##U93240|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)	0.998933	CTCF.p2:13:0.999
chr1	156783683	156783790	reg1021433.p1	6.518	+	TSC_hg19_v1_chr1_+_156737326 AK289872 BC010450 BC004913 X97124	-46389	+	NM_005973 TSC_hg19_v1_chr1_+_156737306	-46444	+	NM_001126051 AK096411 AK304468 NM_001126050	-61605	-	AK126428 NM_001007792	1769	+	AY763098 NM_001161443	2202	-	AB528908 EU832614 EU832686 AF097744 AK222737 AY763100 AF051325 AJ000553 AY763099 BC012107 AK313706 NM_001161441 NM_001161442 NM_001161444 NM_003975	2833	-	AK289872|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##BC010450|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##BC004913|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##X97124|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##NM_005973|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##NM_001126051|HDGF|3068|hepatoma-derived growth factor##AK096411|HDGF|3068|hepatoma-derived growth factor##AK304468|HDGF|3068|hepatoma-derived growth factor##NM_001126050|HDGF|3068|hepatoma-derived growth factor##AK126428|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001007792|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AY763098|SH2D2A|9047|SH2 domain containing 2A##NM_001161443|SH2D2A|9047|SH2 domain containing 2A##EU832614|SH2D2A|9047|SH2 domain containing 2A##EU832686|SH2D2A|9047|SH2 domain containing 2A##AF097744|SH2D2A|9047|SH2 domain containing 2A##AK222737|SH2D2A|9047|SH2 domain containing 2A##AY763100|SH2D2A|9047|SH2 domain containing 2A##AF051325|SH2D2A|9047|SH2 domain containing 2A##AJ000553|SH2D2A|9047|SH2 domain containing 2A##AY763099|SH2D2A|9047|SH2 domain containing 2A##BC012107|SH2D2A|9047|SH2 domain containing 2A##AK313706|SH2D2A|9047|SH2 domain containing 2A##NM_001161441|SH2D2A|9047|SH2 domain containing 2A##NM_001161442|SH2D2A|9047|SH2 domain containing 2A##NM_001161444|SH2D2A|9047|SH2 domain containing 2A##NM_003975|SH2D2A|9047|SH2 domain containing 2A	0.0	
chr18	1585997	1586148	reg1022790.p1	6.518	+	NM_001117 BC093837 BC101803 S83513	-680731	+	AK313050 NM_001099733	-681129	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-773769	-	AK290001 BC111020 NM_022840	985383	-	NM_006101 BC005239 TSC_hg19_v1_chr18_+_2571579 AK289396 AK313184 BC035617 BC010171	985473	+	TSC_hg19_v1_chr18_+_2571589 AF017790	985523	+	NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4##NM_006101|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC005239|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK289396|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK313184|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC035617|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC010171|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AF017790|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)	0.988013	CTCF.p2:11:0.988
chr6	55845544	55845661	reg1019121.p1	6.518	+	AK291559 TSC_hg19_v1_chr6_-_55740389	-105213	-	TSC_hg19_v1_chr6_-_55740358 M60314 BC027958 NM_021073	-105236	-	CU692876 AL137605 AK293856 BC024194 AK055075 AK297191 AK294210 AK127587 NM_001042406 NM_019036	-401670	-	TSC_hg19_v1_chr6_-_56112233 BC126108 BC143862 BC143863 BC143864 BC143865 AK126586	266634	-	TSC_hg19_v1_chr6_-_56112350 BC045597 AF414088 AL136624 AK313398 NM_030820	266759	-	AF330693 TSC_hg19_v1_chr6_-_56258945	413322	-	AK291559|BMP5|653|bone morphogenetic protein 5##M60314|BMP5|653|bone morphogenetic protein 5##BC027958|BMP5|653|bone morphogenetic protein 5##NM_021073|BMP5|653|bone morphogenetic protein 5##AL137605|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK293856|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##BC024194|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK055075|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK297191|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK294210|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK127587|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_001042406|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_019036|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##BC126108|COL21A1|81578|collagen, type XXI, alpha 1##BC143862|COL21A1|81578|collagen, type XXI, alpha 1##BC143863|COL21A1|81578|collagen, type XXI, alpha 1##BC143864|COL21A1|81578|collagen, type XXI, alpha 1##BC143865|COL21A1|81578|collagen, type XXI, alpha 1##AK126586|COL21A1|81578|collagen, type XXI, alpha 1##BC045597|COL21A1|81578|collagen, type XXI, alpha 1##AF414088|COL21A1|81578|collagen, type XXI, alpha 1##AL136624|COL21A1|81578|collagen, type XXI, alpha 1##AK313398|COL21A1|81578|collagen, type XXI, alpha 1##NM_030820|COL21A1|81578|collagen, type XXI, alpha 1##AF330693|COL21A1|81578|collagen, type XXI, alpha 1	0.997956	CTCF.p2:13:0.998
chr8	97022209	97022329	reg1025944.p1	6.518	+	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	-740804	-	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	-741218	+	TSC_hg19_v1_chr8_+_96146116 AK023249	-876133	+	BC127948 BC127947 AJ537424 NM_001001557	150712	-	CR542176 CR542196 TSC_hg19_v1_chr8_-_97247774 AK307085 NM_001199975 BC041005 AK295007 AK311756 M22348 X13585 M26700 BC005230 NM_006294	225540	-	BC012995 NM_015942 TSC_hg19_v1_chr8_-_97273837 AK309002	251548	-	BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6##CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_001199975|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC012995|MTERFD1|51001|MTERF domain containing 1##NM_015942|MTERFD1|51001|MTERF domain containing 1##AK309002|MTERFD1|51001|MTERF domain containing 1	0.889115	CTCF.p2:3:0.889
chr19	43246316	43246408	reg1021649.p1	6.517	+	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	-1761	-	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	-147332	-	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	-213770	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	23462	-	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	137463	-	CU676604 DQ893114 DQ896388 M31125 M33666 NM_002782 X17098 BC020652 NM_001031850	175631	-	M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##DQ893114|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##DQ896388|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M31125|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M33666|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_002782|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##X17098|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC020652|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_001031850|PSG6|5675|pregnancy specific beta-1-glycoprotein 6	0.8433	CTCF.p2:8:0.843
chr7	135243330	135243450	reg1019892.p1	6.517	+	TSC_hg19_v1_chr7_+_135242675 NM_015135 BC136624 AK297307 BC146784 D86978	-702	+	BC035590 U71267 U71268 AL389980 TSC_hg19_v1_chr7_-_135194851 AK314540 AK074493 AK300365 NM_001008225 NM_001190847 NM_001190848 NM_001190849 NM_001190850 NM_013316	-48530	-	AB464251 AF513502 NM_182489	-326660	+	TSC_hg19_v1_chr7_+_135347230 NM_001130929 BC063529 BC073942 BC021734 BC107765 BC047474 BC016741 BC040872	103871	+	AF169301 NM_012450 BC030689 TSC_hg19_v1_chr7_-_135412940 AB208809	169546	-	BC137311 BC137312 AK297754 AY358803 AK290250 AK310180 NM_205855	190089	-	NM_015135|NUP205|23165|nucleoporin 205kDa##BC136624|NUP205|23165|nucleoporin 205kDa##AK297307|NUP205|23165|nucleoporin 205kDa##BC146784|NUP205|23165|nucleoporin 205kDa##D86978|NUP205|23165|nucleoporin 205kDa##BC035590|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71267|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71268|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AL389980|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK314540|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK074493|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK300365|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001008225|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190847|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190848|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190849|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190850|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_013316|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AB464251|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AF513502|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##NM_182489|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##NM_001130929|C7orf73|647087|chromosome 7 open reading frame 73##BC063529|C7orf73|647087|chromosome 7 open reading frame 73##BC073942|C7orf73|647087|chromosome 7 open reading frame 73##BC021734|C7orf73|647087|chromosome 7 open reading frame 73##BC107765|C7orf73|647087|chromosome 7 open reading frame 73##BC047474|C7orf73|647087|chromosome 7 open reading frame 73##BC016741|C7orf73|647087|chromosome 7 open reading frame 73##BC040872|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##AF169301|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##NM_012450|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##BC030689|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##AB208809|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##BC137311|FAM180A|389558|family with sequence similarity 180, member A##BC137312|FAM180A|389558|family with sequence similarity 180, member A##AK297754|FAM180A|389558|family with sequence similarity 180, member A##AY358803|FAM180A|389558|family with sequence similarity 180, member A##AK290250|FAM180A|389558|family with sequence similarity 180, member A##AK310180|FAM180A|389558|family with sequence similarity 180, member A##NM_205855|FAM180A|389558|family with sequence similarity 180, member A	0.900036	CTCF.p2:7:0.900
chr12	54383020	54383148	reg1021400.p1	6.516	+	AK313759 NM_017409 BC001293 AB464578 AF255675 BT009921	-4098	+	NM_014212 AK291946 BC001543 AJ000041 CU674756	-16117	+	TSC_hg19_v1_chr12_+_54348683 AB464579 NM_173860	-34386	+	NM_006897 BC053894 AK315194 AK000445 AB464582 CU691056 BC032769	10841	+	TSC_hg19_v1_chr12_+_54402796 BC053898 NM_022658 AK290959	19762	+	NM_014620 NM_153693 TSC_hg19_v1_chr12_+_54410671 X07495	27593	+	AK313759|HOXC10|3226|homeobox C10##NM_017409|HOXC10|3226|homeobox C10##BC001293|HOXC10|3226|homeobox C10##AF255675|HOXC10|3226|homeobox C10##BT009921|HOXC10|3226|homeobox C10##NM_014212|HOXC11|3227|homeobox C11##AK291946|HOXC11|3227|homeobox C11##BC001543|HOXC11|3227|homeobox C11##AJ000041|HOXC11|3227|homeobox C11##NM_173860|HOXC12|3228|homeobox C12##NM_006897|HOXC9|3225|homeobox C9##BC053894|HOXC9|3225|homeobox C9##AK315194|HOXC9|3225|homeobox C9##AK000445|HOXC9|3225|homeobox C9##BC032769|HOXC9|3225|homeobox C9##BC053898|HOXC8|3224|homeobox C8##NM_022658|HOXC8|3224|homeobox C8##AK290959|HOXC8|3224|homeobox C8##NM_014620|HOXC4|3221|homeobox C4##NM_153693|HOXC6|3223|homeobox C6##X07495|HOXC4|3221|homeobox C4	0.027571	
chr16	14795879	14795987	reg1022023.p1	6.516	+	BC106731 BC106732 BC111804 NM_003561 U95301	-7456	-	TSC_hg19_v1_chr16_+_14726837 BC003054 AK291114 AK297067	-69090	+	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	-69194	+	TSC_hg19_v1_chr16_+_14927651 NM_014287 BC065535	131710	+	TSC_hg19_v1_chr16_+_14927721 X57398	131827	+	AB528194 AF132984 NM_006985	235366	+	BC106731|PLA2G10|8399|phospholipase A2, group X##BC106732|PLA2G10|8399|phospholipase A2, group X##BC111804|PLA2G10|8399|phospholipase A2, group X##NM_003561|PLA2G10|8399|phospholipase A2, group X##U95301|PLA2G10|8399|phospholipase A2, group X##BC003054|BFAR|51283|bifunctional apoptosis regulator##AK291114|BFAR|51283|bifunctional apoptosis regulator##AK297067|BFAR|51283|bifunctional apoptosis regulator##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator##NM_014287|NOMO1|23420|NODAL modulator 1##BC065535|NOMO1|23420|NODAL modulator 1##X57398|NOMO1|23420|NODAL modulator 1##AF132984|NPIP|9284|nuclear pore complex interacting protein##NM_006985|NPIP|9284|nuclear pore complex interacting protein	0.592787	CTCF.p2:4:0.593
chr19	10880905	10881005	reg1021958.p1	6.516	+	TSC_hg19_v1_chr19_+_10828827 BC039596 AK289831	-52096	+	TSC_hg19_v1_chr19_+_10828773 L36983	-52183	+	TSC_hg19_v1_chr19_+_10828765 BC054501	-52188	+	AB528501 DQ892640 DQ895878 BC002443 BC018831 TSC_hg19_v1_chr19_-_10946889 U41804 NM_006858	65969	-	BC157863 NM_001136482	78150	+	TSC_hg19_v1_chr19_+_10982255 NM_199141	101295	+	BC039596|DNM2|1785|dynamin 2##AK289831|DNM2|1785|dynamin 2##L36983|DNM2|1785|dynamin 2##BC054501|DNM2|1785|dynamin 2##DQ892640|TMED1|11018|transmembrane emp24 protein transport domain containing 1##DQ895878|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC002443|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC018831|TMED1|11018|transmembrane emp24 protein transport domain containing 1##U41804|TMED1|11018|transmembrane emp24 protein transport domain containing 1##NM_006858|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC157863|C19orf38|255809|chromosome 19 open reading frame 38##NM_001136482|C19orf38|255809|chromosome 19 open reading frame 38##NM_199141|CARM1|10498|coactivator-associated arginine methyltransferase 1	0.186325	
chr6	10031292	10031436	reg1021725.p1	6.516	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-1595476	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-1595656	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-1928574	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	381252	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	383911	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	384104	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.258777	CTCF.p2:-4:0.259
chr7	30391931	30392049	reg1021808.p1	6.516	+	TSC_hg19_v1_chr7_+_30324634 AY054122	-67334	+	TSC_hg19_v1_chr7_+_30324515 AF527533	-67441	+	AF513707 NM_147128	-68068	+	AY128682 AY128683 AY128684 AY128685 AY128686 AF113925 BC040339 AK300367 AK023969 NM_006092	126331	-	CU674304 TSC_hg19_v1_chr7_-_30544445 BC013937 BC005356 AK315608 BC019243 BC000625 NM_001199815 NM_001199816 NM_001199817 NM_024051	152411	-	NM_002047	242190	+	AY054122|ZNRF2|223082|zinc and ring finger 2##AF527533|ZNRF2|223082|zinc and ring finger 2##AF513707|ZNRF2|223082|zinc and ring finger 2##NM_147128|ZNRF2|223082|zinc and ring finger 2##AY128682|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128683|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128684|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128685|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128686|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AF113925|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC040339|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK300367|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK023969|NOD1|10392|nucleotide-binding oligomerization domain containing 1##NM_006092|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC013937|GGCT|79017|gamma-glutamylcyclotransferase##BC005356|GGCT|79017|gamma-glutamylcyclotransferase##AK315608|GGCT|79017|gamma-glutamylcyclotransferase##BC019243|GGCT|79017|gamma-glutamylcyclotransferase##BC000625|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199815|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199816|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199817|GGCT|79017|gamma-glutamylcyclotransferase##NM_024051|GGCT|79017|gamma-glutamylcyclotransferase##NM_002047|GARS|2617|glycyl-tRNA synthetase	0.710212	CTCF.p2:13:0.710
chr10	96389900	96390043	reg1023831.p1	6.515	+	TSC_hg19_v1_chr10_+_96305574 AK314485 BX538033 BC068440 AK308331 BC105606 AF155827 NM_018063 BC111789 AB527159 AB102716 AB102717 AB102718 AB102719 AB102720 AB102721 AB102722 AB102723 AB113248 AB113249	-84372	+	TSC_hg19_v1_chr10_+_96162276 AB011180 AB449898	-227650	+	NM_015188 TSC_hg19_v1_chr10_+_96162185	-227785	+	NM_000772 NM_001128925 M61856 BC069666 BC096257 BC096258 BC096259 BC096260 M61853 TSC_hg19_v1_chr10_+_96443551 AK223510 AK313403 CU686960	53442	+	M61854 AB463557 NM_000769	132488	+	TSC_hg19_v1_chr10_+_96698414 AK289420 AK298458 BC020754 NM_000771 BC070317 M61855 M61857 BC125054 D00173 M21939 M15331 S46963	308471	+	AK314485|HELLS|3070|helicase, lymphoid-specific##BX538033|HELLS|3070|helicase, lymphoid-specific##BC068440|HELLS|3070|helicase, lymphoid-specific##AK308331|HELLS|3070|helicase, lymphoid-specific##BC105606|HELLS|3070|helicase, lymphoid-specific##AF155827|HELLS|3070|helicase, lymphoid-specific##NM_018063|HELLS|3070|helicase, lymphoid-specific##BC111789|HELLS|3070|helicase, lymphoid-specific##AB102716|HELLS|3070|helicase, lymphoid-specific##AB102717|HELLS|3070|helicase, lymphoid-specific##AB102718|HELLS|3070|helicase, lymphoid-specific##AB102719|HELLS|3070|helicase, lymphoid-specific##AB102720|HELLS|3070|helicase, lymphoid-specific##AB102721|HELLS|3070|helicase, lymphoid-specific##AB102722|HELLS|3070|helicase, lymphoid-specific##AB102723|HELLS|3070|helicase, lymphoid-specific##AB113248|HELLS|3070|helicase, lymphoid-specific##AB113249|HELLS|3070|helicase, lymphoid-specific##AB011180|TBC1D12|23232|TBC1 domain family, member 12##AB449898|TBC1D12|23232|TBC1 domain family, member 12##NM_015188|TBC1D12|23232|TBC1 domain family, member 12##NM_000772|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##NM_001128925|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##M61856|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC069666|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096257|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096258|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096259|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096260|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##M61853|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##AK223510|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##AK313403|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##M61854|CYP2C19|1557|cytochrome P450, family 2, subfamily C, polypeptide 19##NM_000769|CYP2C19|1557|cytochrome P450, family 2, subfamily C, polypeptide 19##AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	0.830645	CTCF.p2:-12:0.831
chr21	47573298	47573391	reg1021427.p1	6.515	+	M34570 TSC_hg19_v1_chr21_+_47546455	-26903	+	AL360197 TSC_hg19_v1_chr21_+_47545943	-27424	+	TSC_hg19_v1_chr21_+_47545200 BT006913	-28148	+	BC136383 BC136395 BC052248 AF169017 AF289021 AF289022 AF289023 AF289024 NM_006657 NM_206965 TSC_hg19_v1_chr21_-_47575491	2139	-	AL136871 TSC_hg19_v1_chr21_-_47604330	30972	-	TSC_hg19_v1_chr21_-_47604340 BC084577	31002	-	M34570|COL6A2|1292|collagen, type VI, alpha 2##AL360197|COL6A2|1292|collagen, type VI, alpha 2##BT006913|COL6A2|1292|collagen, type VI, alpha 2##BC136383|FTCD|10841|formiminotransferase cyclodeaminase##BC136395|FTCD|10841|formiminotransferase cyclodeaminase##BC052248|FTCD|10841|formiminotransferase cyclodeaminase##AF169017|FTCD|10841|formiminotransferase cyclodeaminase##AF289021|FTCD|10841|formiminotransferase cyclodeaminase##AF289022|FTCD|10841|formiminotransferase cyclodeaminase##AF289023|FTCD|10841|formiminotransferase cyclodeaminase##AF289024|FTCD|10841|formiminotransferase cyclodeaminase##NM_006657|FTCD|10841|formiminotransferase cyclodeaminase##NM_206965|FTCD|10841|formiminotransferase cyclodeaminase##AL136871|C21orf56|84221|chromosome 21 open reading frame 56##BC084577|C21orf56|84221|chromosome 21 open reading frame 56	0.482399	CTCF.p2:-6:0.482
chr2	153411671	153411800	reg1022007.p2	6.515	+	BC113878 BC114438 TSC_hg19_v1_chr2_+_153191857 AB067489 BC167159 AB385514	-219762	+	TSC_hg19_v1_chr2_+_153191687 NM_052905	-220065	+	TSC_hg19_v1_chr2_-_153032266 AB463258 AM393419 CU688564 DQ892427 DQ895641 AK292265 AK292847 AK310863 AF042273 AF042274 AL133600 BC022277 BC028740 NM_005843	-379385	-	TSC_hg19_v1_chr2_-_153573924 U70667 AF049524 AF049528 BC000273 BC073138 BC011788 AF049523 AK298547 AK024810 BC029414 NM_017892	162185	-	TSC_hg19_v1_chr2_+_153574392 NM_152522 AK023109	162713	+	TSC_hg19_v1_chr2_+_153575123 AK315657	163380	+	BC113878|FMNL2|114793|formin-like 2##BC114438|FMNL2|114793|formin-like 2##AB067489|FMNL2|114793|formin-like 2##BC167159|FMNL2|114793|formin-like 2##NM_052905|FMNL2|114793|formin-like 2##AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_152522|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK023109|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK315657|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6	0.055368	
chr3	14317205	14317328	reg1022435.p2	6.515	+	TSC_hg19_v1_chr3_+_14220355 AJ238095 AB463841 CR457185	-96915	+	TSC_hg19_v1_chr3_+_14220336 AF182418 AF182289 BC007055 AK312189	-96932	+	NM_014463 TSC_hg19_v1_chr3_+_14220319	-96992	+	TSC_hg19_v1_chr3_+_14444072 AK303649	126803	+	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	126850	+	NM_001080423	266321	-	AJ238095|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##CR457185|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182418|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182289|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC007055|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312189|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_014463|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2	0.027993	
chr12	103889850	103890030	reg1000900.p1	6.514	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	-194	-	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-537848	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-538419	+	AY311388 AJ295695 NM_017564 AB052958	91121	+	AB032773 TSC_hg19_v1_chr12_-_104234857	344884	-	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	345039	-	AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3	0.0	
chr12	51745844	51745947	reg1019772.p2	6.514	+	AB463599 BC075091 AF120493 BC069454 NM_001971	-5453	-	TSC_hg19_v1_chr12_-_51717961 BC047686 AK314304	-27915	-	TSC_hg19_v1_chr12_-_51717911 AK093638 AB032698 AK000783 AK225911 NM_016293	-27974	-	AK295315 AB018282 TSC_hg19_v1_chr12_+_51785241 DQ975204 DQ996398 DQ996537	39295	+	BC035822 NM_007210	39300	-	TSC_hg19_v1_chr12_-_51785431 AK296852	39538	-	BC075091|CELA1|1990|chymotrypsin-like elastase family, member 1##AF120493|CELA1|1990|chymotrypsin-like elastase family, member 1##BC069454|CELA1|1990|chymotrypsin-like elastase family, member 1##NM_001971|CELA1|1990|chymotrypsin-like elastase family, member 1##BC047686|BIN2|51411|bridging integrator 2##AK314304|BIN2|51411|bridging integrator 2##AK093638|BIN2|51411|bridging integrator 2##AB032698|BIN2|51411|bridging integrator 2##AK000783|BIN2|51411|bridging integrator 2##AK225911|BIN2|51411|bridging integrator 2##NM_016293|BIN2|51411|bridging integrator 2##AK295315|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AB018282|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ975204|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ996398|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ996537|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##BC035822|GALNT6|11226|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)##NM_007210|GALNT6|11226|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)##AK296852|GALNT6|11226|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)	0.522259	CTCF.p2:-7:0.522
chr17	32846450	32846557	reg1023350.p1	6.514	+	AB528767 BC105073 BC105075 M57502 AK312183 NM_002981	-156288	-	NM_005408 U59808 AJ001634 BC008621 U46767 X98306 AB463483 CU679005 DQ891497 DQ894688 BT007385 CR450337 Z77650	-162972	+	Y16645 NM_005623	-200442	+	BC133004 BC136710 BC142651 AK126768 NM_207454	59849	-	NM_207313	61264	+	CU693272 AK301773 TSC_hg19_v1_chr17_-_33288425 AK225729 BC026125 AK225728 D78333	441932	-	BC105073|CCL1|6346|chemokine (C-C motif) ligand 1##BC105075|CCL1|6346|chemokine (C-C motif) ligand 1##M57502|CCL1|6346|chemokine (C-C motif) ligand 1##AK312183|CCL1|6346|chemokine (C-C motif) ligand 1##NM_002981|CCL1|6346|chemokine (C-C motif) ligand 1##NM_005408|CCL13|6357|chemokine (C-C motif) ligand 13##U59808|CCL13|6357|chemokine (C-C motif) ligand 13##AJ001634|CCL13|6357|chemokine (C-C motif) ligand 13##BC008621|CCL13|6357|chemokine (C-C motif) ligand 13##U46767|CCL13|6357|chemokine (C-C motif) ligand 13##X98306|CCL13|6357|chemokine (C-C motif) ligand 13##DQ891497|CCL13|6357|chemokine (C-C motif) ligand 13##DQ894688|CCL13|6357|chemokine (C-C motif) ligand 13##BT007385|CCL13|6357|chemokine (C-C motif) ligand 13##CR450337|CCL13|6357|chemokine (C-C motif) ligand 13##Z77650|CCL13|6357|chemokine (C-C motif) ligand 13##Y16645|CCL8|6355|chemokine (C-C motif) ligand 8##NM_005623|CCL8|6355|chemokine (C-C motif) ligand 8##BC133004|C17orf102|400591|chromosome 17 open reading frame 102##BC136710|C17orf102|400591|chromosome 17 open reading frame 102##BC142651|C17orf102|400591|chromosome 17 open reading frame 102##AK126768|C17orf102|400591|chromosome 17 open reading frame 102##NM_207454|C17orf102|400591|chromosome 17 open reading frame 102##NM_207313|TMEM132E|124842|transmembrane protein 132E##AK301773|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225729|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC026125|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225728|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##D78333|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)	1.255528	CTCF.p2:-2:0.926	CTCF.p2:-94:0.330
chr20	633991	634078	reg1023078.p2	6.514	+	TSC_hg19_v1_chr20_-_633845 AK127435 AL833944 NM_080725	-168	-	BC017001 TSC_hg19_v1_chr20_-_633843 AM393140 AM393844 BC047707 BC032604 AK312054	-209	-	NM_004609 U08336 TSC_hg19_v1_chr20_-_590953 BC067836	-43096	-	AK125343 TSC_hg19_v1_chr20_-_656445	22411	-	AY129025 NM_033129	22788	-	AK074650 BC009750 AK291706 NM_033409	115143	-	AK127435|SRXN1|140809|sulfiredoxin 1##AL833944|SRXN1|140809|sulfiredoxin 1##NM_080725|SRXN1|140809|sulfiredoxin 1##BC017001|SRXN1|140809|sulfiredoxin 1##AM393140|SRXN1|140809|sulfiredoxin 1##AM393844|SRXN1|140809|sulfiredoxin 1##BC047707|SRXN1|140809|sulfiredoxin 1##BC032604|SRXN1|140809|sulfiredoxin 1##AK312054|SRXN1|140809|sulfiredoxin 1##NM_004609|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##U08336|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##BC067836|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##AY129025|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)##NM_033129|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)##AK074650|C20orf54|113278|chromosome 20 open reading frame 54##BC009750|C20orf54|113278|chromosome 20 open reading frame 54##AK291706|C20orf54|113278|chromosome 20 open reading frame 54##NM_033409|C20orf54|113278|chromosome 20 open reading frame 54	0.731125	CTCF.p2:12:0.711
chr1	100500154	100500278	reg1020507.p1	6.513	+	BC005136 TSC_hg19_v1_chr1_+_100435576 AK290573	-64618	+	AB021981 NM_012243 TSC_hg19_v1_chr1_+_100435551	-64670	+	M85168 NM_000645	-173451	+	TSC_hg19_v1_chr1_+_100503650 AK057172	3435	+	TSC_hg19_v1_chr1_+_100503661 AF427492 NM_033055	3505	+	BX648406 BC101026 BX641109 AK302513 AY359522 BC054889 NM_194292 AK307824	98245	-	BC005136|SLC35A3|23443|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3##AK290573|SLC35A3|23443|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3##AB021981|SLC35A3|23443|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3##NM_012243|SLC35A3|23443|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3##M85168|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##NM_000645|AGL|178|amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase##AK057172|HIAT1|64645|hippocampus abundant transcript 1##AF427492|HIAT1|64645|hippocampus abundant transcript 1##NM_033055|HIAT1|64645|hippocampus abundant transcript 1##BX648406|SASS6|163786|spindle assembly 6 homolog (C. elegans)##BC101026|SASS6|163786|spindle assembly 6 homolog (C. elegans)##BX641109|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AK302513|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AY359522|SASS6|163786|spindle assembly 6 homolog (C. elegans)##BC054889|SASS6|163786|spindle assembly 6 homolog (C. elegans)##NM_194292|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AK307824|SASS6|163786|spindle assembly 6 homolog (C. elegans)	0.0	
chr16	71249021	71249147	reg1022125.p1	6.513	+	TSC_hg19_v1_chr16_-_70835074 AK056433	-413994	-	TSC_hg19_v1_chr16_-_70835062 AK307766	-414022	-	NM_018052 TSC_hg19_v1_chr16_-_70835060	-414024	-	AK022933 NM_032821 TSC_hg19_v1_chr16_-_71264588 NM_017558	15490	-	TSC_hg19_v1_chr16_-_71264605 BC028351 AK299016 AK299348 NM_001198542 NM_001198543	15530	-	AK000289 TSC_hg19_v1_chr16_-_71318858	69726	-	AK056433|VAC14|55697|Vac14 homolog (S. cerevisiae)##AK307766|VAC14|55697|Vac14 homolog (S. cerevisiae)##NM_018052|VAC14|55697|Vac14 homolog (S. cerevisiae)##AK022933|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_032821|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_017558|HYDIN|54768|hydrocephalus inducing homolog (mouse)##BC028351|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK299016|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK299348|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001198542|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001198543|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK000289|FTSJD1|55783|FtsJ methyltransferase domain containing 1	0.031733	
chr9	124623864	124624030	reg1020596.p1	6.513	+	AY032952 NM_138709	-118884	+	TSC_hg19_v1_chr9_+_124461442 AF367051	-162441	+	NM_032552	-294549	+	TSC_hg19_v1_chr9_-_124855560 AK125178	231641	-	AF521886 NM_001139442 NM_194252	231937	-	TSC_hg19_v1_chr9_-_124922039 BC001016 AF044953	298065	-	AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##AF367051|DAB2IP|153090|DAB2 interacting protein##NM_032552|DAB2IP|153090|DAB2 interacting protein##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AF521886|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_001139442|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_194252|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##BC001016|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AF044953|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa	0.906047	CTCF.p2:-2:0.880
chr2	225233858	225234005	reg1023600.p1	6.512	+	TSC_hg19_v1_chr2_-_224904004 BC015663 AK225823 AK297588 AK312499 NM_001136528 NM_006216	-329761	-	AK295564 NM_001136530	-330591	-	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	-367303	-	BC025754 NM_001122779 NM_024785 AK026399	32799	-	AF052147 BC031844 TSC_hg19_v1_chr2_-_225370764	136797	-	U58089 TSC_hg19_v1_chr2_-_225378353	144405	-	BC015663|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK225823|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK297588|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK312499|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136528|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_006216|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##BC025754|FAM124B|79843|family with sequence similarity 124B##NM_001122779|FAM124B|79843|family with sequence similarity 124B##NM_024785|FAM124B|79843|family with sequence similarity 124B##AK026399|FAM124B|79843|family with sequence similarity 124B##AF052147|CUL3|8452|cullin 3##BC031844|CUL3|8452|cullin 3##U58089|CUL3|8452|cullin 3	0.991902	CTCF.p2:1:0.992
chr3	48955764	48955945	reg1021147.p1	6.512	+	CU674836 DQ892599 DQ895828 TSC_hg19_v1_chr3_-_48936320 BC001689 AK312962 AK301744 NM_000387	-19523	-	TSC_hg19_v1_chr3_+_48885386 AK127190	-70465	+	TSC_hg19_v1_chr3_-_48885271 BC002763 NM_004157	-70566	-	TSC_hg19_v1_chr3_+_48956261 AK223550	402	+	TSC_hg19_v1_chr3_+_48956280 NM_006321 BC000422	429	+	AK097724 NM_001123040	963	-	DQ892599|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20##DQ895828|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20##BC001689|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20##AK312962|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20##AK301744|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20##NM_000387|SLC25A20|788|solute carrier family 25 (carnitine/acylcarnitine translocase), member 20##BC002763|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha##NM_004157|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha##AK223550|ARIH2|10425|ariadne homolog 2 (Drosophila)##NM_006321|ARIH2|10425|ariadne homolog 2 (Drosophila)##BC000422|ARIH2|10425|ariadne homolog 2 (Drosophila)##AK097724|C3orf71|646450|chromosome 3 open reading frame 71##NM_001123040|C3orf71|646450|chromosome 3 open reading frame 71	0.0	
chr9	131905342	131905458	reg1021611.p1	6.512	+	AK310328 TSC_hg19_v1_chr9_+_131902359	-3090	+	TSC_hg19_v1_chr9_+_131901694 AK293296	-3681	+	TSC_hg19_v1_chr9_+_131873871 AK297202 AB464103 BT020119 CU678032 DQ892154 DQ894879 DQ895349 AK307424 NM_001193397	-31541	+	TSC_hg19_v1_chr9_-_131940534 BC064028	35107	-	TSC_hg19_v1_chr9_-_131940541 NM_203434	35140	-	AK092588 AX747616 NM_001012715 BC132699 BC132701	177895	+	AK310328|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK297202|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##BT020119|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ892154|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ894879|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ895349|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK307424|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##NM_001193397|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##BC064028|IER5L|389792|immediate early response 5-like##NM_203434|IER5L|389792|immediate early response 5-like##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106	0.992594	CTCF.p2:8:0.993
chrX	119499305	119499424	reg1018605.p2	6.512	+	AK309999 NM_001142447 NM_012069 AF158383 AF158384 BC117227 BC143404 BC143406 BC143407 HQ258396	-3384	+	TSC_hg19_v1_chrX_-_119445320 AF450484 AK056403 NM_001104544 NM_001104545 NM_017938	-54011	-	TSC_hg19_v1_chrX_-_119445289 AK289684 BC047054	-54079	-	AK304405 TSC_hg19_v1_chrX_-_119602986	103560	-	TSC_hg19_v1_chrX_-_119603051 AY561849 AB528277 CU678318 DQ892095 DQ895288	103669	-	TSC_hg19_v1_chrX_-_119603122 J04183	103736	-	AK309999|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##NM_001142447|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##NM_012069|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF158383|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF158384|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC117227|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143404|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143406|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143407|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##HQ258396|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF450484|FAM70A|55026|family with sequence similarity 70, member A##AK056403|FAM70A|55026|family with sequence similarity 70, member A##NM_001104544|FAM70A|55026|family with sequence similarity 70, member A##NM_001104545|FAM70A|55026|family with sequence similarity 70, member A##NM_017938|FAM70A|55026|family with sequence similarity 70, member A##AK289684|FAM70A|55026|family with sequence similarity 70, member A##BC047054|FAM70A|55026|family with sequence similarity 70, member A##AK304405|LAMP2|3920|lysosomal-associated membrane protein 2##AY561849|LAMP2|3920|lysosomal-associated membrane protein 2##DQ892095|LAMP2|3920|lysosomal-associated membrane protein 2##DQ895288|LAMP2|3920|lysosomal-associated membrane protein 2##J04183|LAMP2|3920|lysosomal-associated membrane protein 2	0.893508	CTCF.p2:-30:0.894
chr15	76349907	76350023	reg1021330.p2	6.511	+	CR749519 AK311507 BC017568 NM_138573	-45192	-	TSC_hg19_v1_chr15_+_76196276 BC020204 NM_012170 NM_147188 AK307084 AK024048 BC041691 AK223500 BC039024 AK294311 BC008762 BC032540 CU692024 AY005144	-153716	+	AK296234 NM_001145335 TSC_hg19_v1_chr15_+_76136384	-213577	+	AK311204 TSC_hg19_v1_chr15_-_76352131	2137	-	TSC_hg19_v1_chr15_+_76352281 AK095509 NM_152335	2324	+	TSC_hg19_v1_chr15_+_76352323 AK056777 AK308676	2364	+	CR749519|NRG4|145957|neuregulin 4##AK311507|NRG4|145957|neuregulin 4##BC017568|NRG4|145957|neuregulin 4##NM_138573|NRG4|145957|neuregulin 4##BC020204|FBXO22|26263|F-box protein 22##NM_012170|FBXO22|26263|F-box protein 22##NM_147188|FBXO22|26263|F-box protein 22##AK307084|FBXO22|26263|F-box protein 22##AK024048|FBXO22|26263|F-box protein 22##BC041691|FBXO22|26263|F-box protein 22##AK223500|FBXO22|26263|F-box protein 22##BC039024|FBXO22|26263|F-box protein 22##AK294311|FBXO22|26263|F-box protein 22##BC032540|FBXO22|26263|F-box protein 22##AY005144|FBXO22|26263|F-box protein 22##AK296234|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##NM_001145335|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK311204|NRG4|145957|neuregulin 4##AK095509|C15orf27|123591|chromosome 15 open reading frame 27##NM_152335|C15orf27|123591|chromosome 15 open reading frame 27##AK308676|C15orf27|123591|chromosome 15 open reading frame 27	0.979717	CTCF.p2:2:0.980
chr20	2432918	2433037	reg1022126.p2	6.511	+	AF540969 AF540970 NM_198994	-71424	+	NM_003245 AK298637 AK299447 AK308249 AK290324 AK291351 AK315236 L10386 BC109075 BC109076	-156328	+	TSC_hg19_v1_chr20_-_2083527 BC034792	-349451	-	TSC_hg19_v1_chr20_-_2451416 X17568 X17567 BC080516	18413	-	TSC_hg19_v1_chr20_-_2451436 AK301034 AK312620 AK301206 AK307093 AK307266	18455	-	TSC_hg19_v1_chr20_-_2451439 BC003530 J04564 NM_003091 NM_198216	18496	-	AF540969|TGM6|343641|transglutaminase 6##AF540970|TGM6|343641|transglutaminase 6##NM_198994|TGM6|343641|transglutaminase 6##NM_003245|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK298637|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK299447|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK308249|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK290324|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291351|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK315236|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##L10386|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109075|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109076|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##X17568|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##X17567|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##BC080516|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK301034|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK312620|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK301206|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK307093|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##BC003530|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##J04564|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##NM_003091|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##NM_198216|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1	0.964364	CTCF.p2:-6:0.964
chr4	179499235	179499343	reg1023088.p1	6.511	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-1135646	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-1135696	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-1135748	-	TSC_hg19_v1_chr4_+_183065111 AK308489	3565836	+	NM_001080477 HE578284 HE578285	3745865	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	4339241	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.021438	
chr6	24495469	24495633	reg1022400.p2	6.511	+	TSC_hg19_v1_chr6_+_24495196 AK314357 BC034321 NM_001080 NM_170740 DQ891671 DQ894857 AJ427355 Y11192	-356	+	TSC_hg19_v1_chr6_+_24495080 AK290800 AK294699 AK315380	-473	+	L11702 CU676688 AY007546 BC093645 BC112001 L11701 AK310692 BC020748 NM_177483 AJ308108 NM_001503	-5758	-	AK310289 NM_001252328	87903	-	AK296310 AK295008 AK307503 AK296426 BC140821 BC144628 NM_001168375 NM_001168376 TSC_hg19_v1_chr6_-_24646374 AB002317 BC152460 NM_001168374 NM_001168377 NM_014809	150617	-	AJ420495 TSC_hg19_v1_chr6_-_24667106 AK296623 AB587417 AK002168 EU446614 BC110375 AF223469 AJ269473 AF201687 BC017553 NM_016614 AK308836	171419	-	AK314357|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##BC034321|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_001080|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_170740|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ891671|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ894857|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AJ427355|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##Y11192|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK290800|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK294699|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK315380|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##L11702|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AY007546|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC093645|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC112001|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##L11701|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310692|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC020748|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_177483|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AJ308108|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_001503|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310289|KIAA0319|9856|KIAA0319##NM_001252328|KIAA0319|9856|KIAA0319##AK296310|KIAA0319|9856|KIAA0319##AK295008|KIAA0319|9856|KIAA0319##AK307503|KIAA0319|9856|KIAA0319##AK296426|KIAA0319|9856|KIAA0319##BC140821|KIAA0319|9856|KIAA0319##BC144628|KIAA0319|9856|KIAA0319##NM_001168375|KIAA0319|9856|KIAA0319##NM_001168376|KIAA0319|9856|KIAA0319##AB002317|KIAA0319|9856|KIAA0319##BC152460|KIAA0319|9856|KIAA0319##NM_001168374|KIAA0319|9856|KIAA0319##NM_001168377|KIAA0319|9856|KIAA0319##NM_014809|KIAA0319|9856|KIAA0319##AJ420495|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK296623|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK002168|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##EU446614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC110375|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF223469|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AJ269473|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF201687|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC017553|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##NM_016614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK308836|TDP2|51567|tyrosyl-DNA phosphodiesterase 2	0.143915	
chr8	18537924	18538039	reg1022581.p2	6.511	+	D90042 NM_000015 BC067218 BC015878 D90040 AJ581144	-289193	+	AJ581141 NM_001160174	-458805	+	AJ581152 NM_000662 NM_001160170 NM_001160171 NM_001160172 NM_001160173 NM_001160175 NM_001160176 BC047666 BX647521 BC013732 AJ581135 TSC_hg19_v1_chr8_+_18067655	-470347	+	EU832144 EU832237 AK296546 BX647320 BX647406 TSC_hg19_v1_chr8_-_18541614	3551	-	AB463178 BC045112 AB023159 NM_206909	128368	-	GU727648 TSC_hg19_v1_chr8_-_18871128	333131	-	D90042|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##NM_000015|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC067218|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC015878|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##D90040|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##AJ581144|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##AJ581141|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160174|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##AJ581152|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_000662|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160170|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160171|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160172|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160173|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160175|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##NM_001160176|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BC047666|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BX647521|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##BC013732|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##AJ581135|NAT1|9|N-acetyltransferase 1 (arylamine N-acetyltransferase)##EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3##EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3##AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3##BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3##AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3##GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3	0.739716	CTCF.p2:-20:0.740
chr11	27861187	27861367	reg1022906.p2	6.510	+	EF689021 NM_170731	-117673	-	AB038671 AY054393 AY054394 AY054395 EF674517 EF674518 EF674519 NM_001143805 NM_001143806 NM_170732	-119003	-	AY054396 EF674520 NM_001143807	-120035	-	AB062483 TSC_hg19_v1_chr11_-_28129684 AY791349	268388	-	TSC_hg19_v1_chr11_-_28129692 AK312576 BC035917 AL136819	268415	-	TSC_hg19_v1_chr11_-_28129704 BC026090 NM_031217	268446	-	EF689021|BDNF|627|brain-derived neurotrophic factor##NM_170731|BDNF|627|brain-derived neurotrophic factor##AB038671|BDNF|627|brain-derived neurotrophic factor##AY054393|BDNF|627|brain-derived neurotrophic factor##AY054394|BDNF|627|brain-derived neurotrophic factor##AY054395|BDNF|627|brain-derived neurotrophic factor##EF674517|BDNF|627|brain-derived neurotrophic factor##EF674518|BDNF|627|brain-derived neurotrophic factor##EF674519|BDNF|627|brain-derived neurotrophic factor##NM_001143805|BDNF|627|brain-derived neurotrophic factor##NM_001143806|BDNF|627|brain-derived neurotrophic factor##NM_170732|BDNF|627|brain-derived neurotrophic factor##AY054396|BDNF|627|brain-derived neurotrophic factor##EF674520|BDNF|627|brain-derived neurotrophic factor##NM_001143807|BDNF|627|brain-derived neurotrophic factor##AB062483|KIF18A|81930|kinesin family member 18A##AY791349|KIF18A|81930|kinesin family member 18A##AK312576|KIF18A|81930|kinesin family member 18A##BC035917|KIF18A|81930|kinesin family member 18A##AL136819|KIF18A|81930|kinesin family member 18A##BC026090|KIF18A|81930|kinesin family member 18A##NM_031217|KIF18A|81930|kinesin family member 18A	0.999256	CTCF.p2:-30:0.999
chr19	46581951	46582059	reg1019013.p3	6.510	+	AY672114 NM_001002923	-37732	-	NM_005091	-55450	-	TSC_hg19_v1_chr19_+_46498724 GQ375050	-83278	+	HQ258051 BC130593 BC130597 AY358434 AY672113 NM_207393	45916	-	AY672112 NM_001002915	69033	+	AY358692 NM_001135113	69494	+	AY672114|IGFL4|444882|IGF-like family member 4##NM_001002923|IGFL4|444882|IGF-like family member 4##NM_005091|PGLYRP1|8993|peptidoglycan recognition protein 1##GQ375050|CCDC61|729440|coiled-coil domain containing 61##HQ258051|IGFL3|388555|IGF-like family member 3##BC130593|IGFL3|388555|IGF-like family member 3##BC130597|IGFL3|388555|IGF-like family member 3##AY358434|IGFL3|388555|IGF-like family member 3##AY672113|IGFL3|388555|IGF-like family member 3##NM_207393|IGFL3|388555|IGF-like family member 3##AY672112|IGFL2|147920|IGF-like family member 2##NM_001002915|IGFL2|147920|IGF-like family member 2##AY358692|IGFL2|147920|IGF-like family member 2##NM_001135113|IGFL2|147920|IGF-like family member 2	0.99277	CTCF.p2:6:0.993
chr8	55082002	55082125	reg1021978.p1	6.510	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-34252	+	TSC_hg19_v1_chr8_-_55014465 CR457103 CU679013 DQ891527 DQ894717 BC010397 AF077198 AF077199 AF291053 AK307277 AK313739 AF081281 AK298206 AK289400 BC008652 AF052112 NM_006330	-67565	-	TSC_hg19_v1_chr8_-_54934990 NM_006756 NM_201437	-147044	-	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	288453	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	446589	+	BC106028 AY534241 NM_052898	932951	+	BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##CR457103|LYPLA1|10434|lysophospholipase I##DQ891527|LYPLA1|10434|lysophospholipase I##DQ894717|LYPLA1|10434|lysophospholipase I##BC010397|LYPLA1|10434|lysophospholipase I##AF077198|LYPLA1|10434|lysophospholipase I##AF077199|LYPLA1|10434|lysophospholipase I##AF291053|LYPLA1|10434|lysophospholipase I##AK307277|LYPLA1|10434|lysophospholipase I##AK313739|LYPLA1|10434|lysophospholipase I##AF081281|LYPLA1|10434|lysophospholipase I##AK298206|LYPLA1|10434|lysophospholipase I##AK289400|LYPLA1|10434|lysophospholipase I##BC008652|LYPLA1|10434|lysophospholipase I##AF052112|LYPLA1|10434|lysophospholipase I##NM_006330|LYPLA1|10434|lysophospholipase I##NM_006756|TCEA1|6917|transcription elongation factor A (SII), 1##NM_201437|TCEA1|6917|transcription elongation factor A (SII), 1##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4	0.211477	CTCF.p2:0:0.211
chrX	31676634	31676743	reg1019535.p2	6.510	+	NM_004014 S62617	-150274	-	CU688550 M92650 TSC_hg19_v1_chrX_-_31285072 BC070078 NM_004015 NM_004016 NM_004017 NM_004018 NM_004019 S42206 BC094758 AK299936 BC028720 S38776	-391654	-	BC069538 BC100768 BC100769 BC100770 BC069069 AF285592 NM_031894	-586525	-	L35854 NM_004013 NM_004020 NM_004021 NM_004022 NM_004023	496897	-	NM_004011 NM_004012	753682	-	NM_004010 S81419 NM_004009 S64152	1469855	-	NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin##M92650|DMD|1756|dystrophin##BC070078|DMD|1756|dystrophin##NM_004015|DMD|1756|dystrophin##NM_004016|DMD|1756|dystrophin##NM_004017|DMD|1756|dystrophin##NM_004018|DMD|1756|dystrophin##NM_004019|DMD|1756|dystrophin##S42206|DMD|1756|dystrophin##BC094758|DMD|1756|dystrophin##AK299936|DMD|1756|dystrophin##BC028720|DMD|1756|dystrophin##S38776|DMD|1756|dystrophin##BC069538|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100768|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100769|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100770|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC069069|FTHL17|53940|ferritin, heavy polypeptide-like 17##AF285592|FTHL17|53940|ferritin, heavy polypeptide-like 17##NM_031894|FTHL17|53940|ferritin, heavy polypeptide-like 17##L35854|DMD|1756|dystrophin##NM_004013|DMD|1756|dystrophin##NM_004020|DMD|1756|dystrophin##NM_004021|DMD|1756|dystrophin##NM_004022|DMD|1756|dystrophin##NM_004023|DMD|1756|dystrophin##NM_004011|DMD|1756|dystrophin##NM_004012|DMD|1756|dystrophin##NM_004010|DMD|1756|dystrophin##S81419|DMD|1756|dystrophin##NM_004009|DMD|1756|dystrophin##S64152|DMD|1756|dystrophin	0.998312	CTCF.p2:-1:0.998
chr16	82065167	82065278	reg1022519.p2	6.509	+	BC019670 AK315652 AK026740 NM_145168	-20154	-	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-252292	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-252320	+	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	3639	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	3710	+	TSC_hg19_v1_chr16_+_82068989 DQ893100 DQ896372	3771	+	BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##DQ893100|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##DQ896372|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.047372	
chr11	93214997	93215093	reg1019215.p1	6.508	+	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	-151202	+	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	-283960	-	TSC_hg19_v1_chr11_-_92930978 CU690400	-284058	-	AF197137 TSC_hg19_v1_chr11_-_93276558 BC031564 NM_020179	61490	-	TSC_hg19_v1_chr11_+_93394847 NM_033395 BC015989 BC017394	179789	+	AB051518 TSC_hg19_v1_chr11_+_93394877	179844	+	NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##AF197137|C11orf75|56935|chromosome 11 open reading frame 75##BC031564|C11orf75|56935|chromosome 11 open reading frame 75##NM_020179|C11orf75|56935|chromosome 11 open reading frame 75##NM_033395|KIAA1731|85459|KIAA1731##BC015989|KIAA1731|85459|KIAA1731##BC017394|KIAA1731|85459|KIAA1731##AB051518|KIAA1731|85459|KIAA1731	0.151182	
chrX	136134673	136134782	reg1022294.p2	6.508	+	BC069439 NM_054021 CU686814	-20892	-	TSC_hg19_v1_chrX_+_135991587 AK055694	-143171	+	TSC_hg19_v1_chrX_-_135962939 NM_001164803 NM_002139	-171792	-	TSC_hg19_v1_chrX_+_136648313 AF028706 NM_003413	513602	+	EU532020 TSC_hg19_v1_chrX_+_136648691 BC113393 BC113395 AB464363 HQ258447	514040	+	AF100143 TSC_hg19_v1_chrX_-_137793504 AK289960 BC034340	1658727	-	BC069439|GPR101|83550|G protein-coupled receptor 101##NM_054021|GPR101|83550|G protein-coupled receptor 101##NM_001164803|RBMX|27316|RNA binding motif protein, X-linked##NM_002139|RBMX|27316|RNA binding motif protein, X-linked##AF028706|ZIC3|7547|Zic family member 3##NM_003413|ZIC3|7547|Zic family member 3##EU532020|ZIC3|7547|Zic family member 3##BC113393|ZIC3|7547|Zic family member 3##BC113395|ZIC3|7547|Zic family member 3##HQ258447|ZIC3|7547|Zic family member 3##AF100143|FGF13|2258|fibroblast growth factor 13##AK289960|FGF13|2258|fibroblast growth factor 13##BC034340|FGF13|2258|fibroblast growth factor 13	0.966303	CTCF.p2:3:0.949
chrX	99870062	99870199	reg1024695.p1	6.508	+	NM_022144 AF191770 BC034030 AF291656 AF234259 AY358706 AB055421 AB590911 CU689814	-30229	+	EF676096 NM_001105243 NM_001184880 NM_020766 TSC_hg19_v1_chrX_-_99665272	-204857	-	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	-3731160	+	BT006977 CR457115 AB527646 DQ890668 DQ893849 TSC_hg19_v1_chrX_-_99891804 AF053453 AK299176 AF133426 AK309581 AY358825 AB097016 AF043906 U84895 BC012389 NM_003270 AK075072 AB209876 AK315773 AK300852	21638	-	NM_014467 TSC_hg19_v1_chrX_+_99899195 AK075462 AF060567 AF393649	29102	+	BC020733 TSC_hg19_v1_chrX_+_99899388	29265	+	NM_022144|TNMD|64102|tenomodulin##AF191770|TNMD|64102|tenomodulin##BC034030|TNMD|64102|tenomodulin##AF291656|TNMD|64102|tenomodulin##AF234259|TNMD|64102|tenomodulin##AY358706|TNMD|64102|tenomodulin##AB055421|TNMD|64102|tenomodulin##EF676096|PCDH19|57526|protocadherin 19##NM_001105243|PCDH19|57526|protocadherin 19##NM_001184880|PCDH19|57526|protocadherin 19##NM_020766|PCDH19|57526|protocadherin 19##NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa##BT006977|TSPAN6|7105|tetraspanin 6##CR457115|TSPAN6|7105|tetraspanin 6##DQ890668|TSPAN6|7105|tetraspanin 6##DQ893849|TSPAN6|7105|tetraspanin 6##AF053453|TSPAN6|7105|tetraspanin 6##AK299176|TSPAN6|7105|tetraspanin 6##AF133426|TSPAN6|7105|tetraspanin 6##AK309581|TSPAN6|7105|tetraspanin 6##AY358825|TSPAN6|7105|tetraspanin 6##AB097016|TSPAN6|7105|tetraspanin 6##AF043906|TSPAN6|7105|tetraspanin 6##U84895|TSPAN6|7105|tetraspanin 6##BC012389|TSPAN6|7105|tetraspanin 6##NM_003270|TSPAN6|7105|tetraspanin 6##AK075072|TSPAN6|7105|tetraspanin 6##AB209876|TSPAN6|7105|tetraspanin 6##AK315773|TSPAN6|7105|tetraspanin 6##AK300852|TSPAN6|7105|tetraspanin 6##NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2##BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2	0.685029	CTCF.p2:6:0.685
chr10	112431933	112432098	reg1021461.p1	6.507	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-27886	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-87900	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-104523	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	199597	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	199699	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	246681	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.587625	CTCF.p2:-3:0.588
chr1	204910988	204911093	reg1019367.p1	6.507	+	TSC_hg19_v1_chr1_+_204839989 AK308686	-71057	+	TSC_hg19_v1_chr1_+_204797779 BC040674 NM_001005388 NM_001005389 NM_001160332 NM_001160333 NM_015090 AK295291 AK299262 AK090639 AX746553	-113228	+	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	-256449	-	NM_001160331 BC137013 BC144454 BC144455 AB384522	2358	+	TSC_hg19_v1_chr1_+_204938044 BC008124	27022	+	TSC_hg19_v1_chr1_+_205012339 NM_005076	101298	+	AK308686|NFASC|23114|neurofascin##BC040674|NFASC|23114|neurofascin##NM_001005388|NFASC|23114|neurofascin##NM_001005389|NFASC|23114|neurofascin##NM_001160332|NFASC|23114|neurofascin##NM_001160333|NFASC|23114|neurofascin##NM_015090|NFASC|23114|neurofascin##AK295291|NFASC|23114|neurofascin##AK299262|NFASC|23114|neurofascin##AK090639|NFASC|23114|neurofascin##AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2##NM_001160331|NFASC|23114|neurofascin##BC137013|NFASC|23114|neurofascin##BC144454|NFASC|23114|neurofascin##BC144455|NFASC|23114|neurofascin##BC008124|NFASC|23114|neurofascin##NM_005076|CNTN2|6900|contactin 2 (axonal)	0.361159	CTCF.p2:7:0.361
chr12	104851267	104851383	reg1021863.p3	6.507	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-238	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-517	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-554	+	TSC_hg19_v1_chr12_+_105153261 AF131762	301952	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	470938	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	528765	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.0	
chr17	40826029	40826138	reg1022530.p1	6.507	+	TSC_hg19_v1_chr17_+_40811298 NM_016437 BC108739 AK225134 BC051890 BC052283 AK022324 BC009670 CU679431 AB464326	-14692	+	TSC_hg19_v1_chr17_+_40761700 AK313339 BC000619 M61764 AK311637 BT019931 CR407642 DQ891925 DQ895110	-64377	+	TSC_hg19_v1_chr17_-_40761405 NM_178126	-64659	-	TSC_hg19_v1_chr17_-_40828093 AK096767	2009	-	TSC_hg19_v1_chr17_-_40829013 BC016062 AK024672 AB208939 BC052978 NM_024927	2730	-	AF208237 AY429103 EU832758 GQ129298 AF215981 BC098132 BC098157 BC098304 BC099840 NM_016602	7759	-	NM_016437|TUBG2|27175|tubulin, gamma 2##BC108739|TUBG2|27175|tubulin, gamma 2##AK225134|TUBG2|27175|tubulin, gamma 2##BC051890|TUBG2|27175|tubulin, gamma 2##BC052283|TUBG2|27175|tubulin, gamma 2##AK022324|TUBG2|27175|tubulin, gamma 2##BC009670|TUBG2|27175|tubulin, gamma 2##AK313339|TUBG1|7283|tubulin, gamma 1##BC000619|TUBG1|7283|tubulin, gamma 1##M61764|TUBG1|7283|tubulin, gamma 1##BT019931|TUBG1|7283|tubulin, gamma 1##CR407642|TUBG1|7283|tubulin, gamma 1##DQ891925|TUBG1|7283|tubulin, gamma 1##DQ895110|TUBG1|7283|tubulin, gamma 1##NM_178126|FAM134C|162427|family with sequence similarity 134, member C##AK096767|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##BC016062|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AK024672|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AB208939|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##BC052978|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##NM_024927|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AF208237|CCR10|2826|chemokine (C-C motif) receptor 10##AY429103|CCR10|2826|chemokine (C-C motif) receptor 10##EU832758|CCR10|2826|chemokine (C-C motif) receptor 10##GQ129298|CCR10|2826|chemokine (C-C motif) receptor 10##AF215981|CCR10|2826|chemokine (C-C motif) receptor 10##BC098132|CCR10|2826|chemokine (C-C motif) receptor 10##BC098157|CCR10|2826|chemokine (C-C motif) receptor 10##BC098304|CCR10|2826|chemokine (C-C motif) receptor 10##BC099840|CCR10|2826|chemokine (C-C motif) receptor 10##NM_016602|CCR10|2826|chemokine (C-C motif) receptor 10	0.291958	CTCF.p2:-7:0.292
chr18	57069694	57069793	reg1001450.p1	6.507	+	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	-43257	-	EU831768 EU831846 AY286502 BC065562 BX640655 AB593158 BX648518 BC106887 BC106888 AK123184 NM_181654	-83957	-	BC051901 AF115392 NM_013435 AB593018	-129089	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	294848	-	NM_133459 TSC_hg19_v1_chr18_-_57364656	294907	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	497486	+	DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1##EU831768|CPLX4|339302|complexin 4##EU831846|CPLX4|339302|complexin 4##AY286502|CPLX4|339302|complexin 4##BC065562|CPLX4|339302|complexin 4##BX640655|CPLX4|339302|complexin 4##AB593158|CPLX4|339302|complexin 4##BX648518|CPLX4|339302|complexin 4##BC106887|CPLX4|339302|complexin 4##BC106888|CPLX4|339302|complexin 4##AK123184|CPLX4|339302|complexin 4##NM_181654|CPLX4|339302|complexin 4##BC051901|RAX|30062|retina and anterior neural fold homeobox##AF115392|RAX|30062|retina and anterior neural fold homeobox##NM_013435|RAX|30062|retina and anterior neural fold homeobox##AB593018|RAX|30062|retina and anterior neural fold homeobox##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1	0.029016	
chr2	26394505	26394620	reg1021628.p1	6.507	+	AF086917 AF106681 BC000896 AB529109 AF297660 AF498945 CR457303 EU831649 EU831733 TSC_hg19_v1_chr2_+_26257540 AF091032	-137095	+	NM_016131 TSC_hg19_v1_chr2_+_26256952 AL136650 AK023223	-137708	+	TSC_hg19_v1_chr2_-_26205437 NM_002254	-189122	-	AB124552 NM_001168241	1397	+	AK090454 NM_001191033	9022	+	CU679263 DQ892776 DQ896023 FJ626228 TSC_hg19_v1_chr2_-_26467495 AK302532 AK293398 AK299258 AK313027 D16480 BC009235 GU727642 U04627	72919	-	AF086917|RAB10|10890|RAB10, member RAS oncogene family##AF106681|RAB10|10890|RAB10, member RAS oncogene family##BC000896|RAB10|10890|RAB10, member RAS oncogene family##AF297660|RAB10|10890|RAB10, member RAS oncogene family##AF498945|RAB10|10890|RAB10, member RAS oncogene family##CR457303|RAB10|10890|RAB10, member RAS oncogene family##EU831649|RAB10|10890|RAB10, member RAS oncogene family##EU831733|RAB10|10890|RAB10, member RAS oncogene family##AF091032|RAB10|10890|RAB10, member RAS oncogene family##NM_016131|RAB10|10890|RAB10, member RAS oncogene family##AL136650|RAB10|10890|RAB10, member RAS oncogene family##AK023223|RAB10|10890|RAB10, member RAS oncogene family##NM_002254|KIF3C|3797|kinesin family member 3C##AB124552|FAM59B|150946|family with sequence similarity 59, member B##NM_001168241|FAM59B|150946|family with sequence similarity 59, member B##AK090454|FAM59B|150946|family with sequence similarity 59, member B##NM_001191033|FAM59B|150946|family with sequence similarity 59, member B##DQ892776|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##DQ896023|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##FJ626228|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK302532|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK293398|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK299258|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK313027|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##D16480|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##BC009235|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##GU727642|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##U04627|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit	0.996087	CTCF.p2:-20:0.996
chrX	48506781	48506907	reg1023463.p1	6.507	+	TSC_hg19_v1_chrX_+_48456558 DQ907254 DQ907255	-50263	+	TSC_hg19_v1_chrX_+_48456231 NM_001166426 AB529059 EU832660 EU832738	-50542	+	TSC_hg19_v1_chrX_+_48456189 BC080579 AF158978 BC067094	-50678	+	TSC_hg19_v1_chrX_+_48542182 NM_000377	35330	+	TSC_hg19_v1_chrX_+_48542206 BC002961 U12707 BC012738 U19927 EU176449 AB590224	35379	+	TSC_hg19_v1_chrX_+_48555124 AF019968 NM_003173 BC006238	48284	+	DQ907254|WDR13|64743|WD repeat domain 13##DQ907255|WDR13|64743|WD repeat domain 13##NM_001166426|WDR13|64743|WD repeat domain 13##EU832660|WDR13|64743|WD repeat domain 13##EU832738|WDR13|64743|WD repeat domain 13##BC080579|WDR13|64743|WD repeat domain 13##AF158978|WDR13|64743|WD repeat domain 13##BC067094|WDR13|64743|WD repeat domain 13##NM_000377|WAS|7454|Wiskott-Aldrich syndrome (eczema-thrombocytopenia)##BC002961|WAS|7454|Wiskott-Aldrich syndrome (eczema-thrombocytopenia)##U12707|WAS|7454|Wiskott-Aldrich syndrome (eczema-thrombocytopenia)##BC012738|WAS|7454|Wiskott-Aldrich syndrome (eczema-thrombocytopenia)##U19927|WAS|7454|Wiskott-Aldrich syndrome (eczema-thrombocytopenia)##EU176449|WAS|7454|Wiskott-Aldrich syndrome (eczema-thrombocytopenia)##AF019968|SUV39H1|6839|suppressor of variegation 3-9 homolog 1 (Drosophila)##NM_003173|SUV39H1|6839|suppressor of variegation 3-9 homolog 1 (Drosophila)##BC006238|SUV39H1|6839|suppressor of variegation 3-9 homolog 1 (Drosophila)	0.278921	CTCF.p2:-15:0.279
chr10	100091785	100091897	reg1021384.p2	6.506	+	TSC_hg19_v1_chr10_-_100027952 AK172781 BC013153 BC035470 NM_032211	-63849	-	TSC_hg19_v1_chr10_+_99894427 AF525304 BC047908 BC098175 BC098268 BC098359 BC099848	-197406	+	NM_014472 AK292546 TSC_hg19_v1_chr10_+_99894414	-197444	+	CU675263 DQ893418 DQ896787 AK075265 TSC_hg19_v1_chr10_-_100174919 AK225637 AK074429 BC006131 AK295699 NM_032709	83093	-	BC002514 TSC_hg19_v1_chr10_-_100206650	114805	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	114834	-	AK172781|LOXL4|84171|lysyl oxidase-like 4##BC013153|LOXL4|84171|lysyl oxidase-like 4##BC035470|LOXL4|84171|lysyl oxidase-like 4##NM_032211|LOXL4|84171|lysyl oxidase-like 4##AF525304|C10orf28|27291|chromosome 10 open reading frame 28##BC047908|C10orf28|27291|chromosome 10 open reading frame 28##BC098175|C10orf28|27291|chromosome 10 open reading frame 28##BC098268|C10orf28|27291|chromosome 10 open reading frame 28##BC098359|C10orf28|27291|chromosome 10 open reading frame 28##BC099848|C10orf28|27291|chromosome 10 open reading frame 28##NM_014472|C10orf28|27291|chromosome 10 open reading frame 28##AK292546|C10orf28|27291|chromosome 10 open reading frame 28##DQ893418|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##DQ896787|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK075265|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK225637|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK074429|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##BC006131|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK295699|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##NM_032709|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1	0.976126	CTCF.p2:10:0.976
chr12	121078244	121078353	reg1019962.p2	6.506	+	AK223206 TSC_hg19_v1_chr12_-_121019185 AK303144 AF070660 AF117232 AJ306296 BC012505 NM_015918 NM_198202	-59110	-	AK094011 AK097807 TSC_hg19_v1_chr12_+_120972158 AK126274 AK301608 AB027196 BC016622 BC031596 BC101709 BC101715 BC143493 BT006974 CU677651 D87451 DQ890634 DQ893805	-105798	+	TSC_hg19_v1_chr12_+_120972153 NM_014868 AK315558	-106170	+	BC030201 NM_001033677	123	+	AF169148 AF169149 NM_004276 NM_031205	10072	+	TSC_hg19_v1_chr12_+_121124951 NM_014730	46640	+	AK223206|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK303144|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF070660|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF117232|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AJ306296|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##BC012505|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015918|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_198202|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK094011|RNF10|9921|ring finger protein 10##AK097807|RNF10|9921|ring finger protein 10##AK126274|RNF10|9921|ring finger protein 10##AK301608|RNF10|9921|ring finger protein 10##AB027196|RNF10|9921|ring finger protein 10##BC016622|RNF10|9921|ring finger protein 10##BC031596|RNF10|9921|ring finger protein 10##BC101709|RNF10|9921|ring finger protein 10##BC101715|RNF10|9921|ring finger protein 10##BC143493|RNF10|9921|ring finger protein 10##BT006974|RNF10|9921|ring finger protein 10##D87451|RNF10|9921|ring finger protein 10##DQ890634|RNF10|9921|ring finger protein 10##DQ893805|RNF10|9921|ring finger protein 10##NM_014868|RNF10|9921|ring finger protein 10##AK315558|RNF10|9921|ring finger protein 10##BC030201|CABP1|9478|calcium binding protein 1##NM_001033677|CABP1|9478|calcium binding protein 1##AF169148|CABP1|9478|calcium binding protein 1##AF169149|CABP1|9478|calcium binding protein 1##NM_004276|CABP1|9478|calcium binding protein 1##NM_031205|CABP1|9478|calcium binding protein 1##NM_014730|MLEC|9761|malectin	0.700646	CTCF.p2:11:0.701
chr14	75345181	75345309	reg1023210.p2	6.506	+	BC105720 BC105721 BC105927 NM_001080408 NM_001243007	-14710	-	TSC_hg19_v1_chr14_+_75283667 BC023570	-61545	+	TSC_hg19_v1_chr14_+_75230066 AK095760 NM_019589	-115213	+	TSC_hg19_v1_chr14_+_75348624 NM_001244883 NM_001933 AK289414 BX248276 AK299505 AK316463 AK300396 BC000302 BC001922 BC002735 BX248764 D16373 CR456727 CU674146 L37418 BX248774	3380	+	NM_031464	43899	-	TSC_hg19_v1_chr14_-_75389964 BC036574 AK226137 AK054800	44708	-	BC105720|PROX2|283571|prospero homeobox 2##BC105721|PROX2|283571|prospero homeobox 2##BC105927|PROX2|283571|prospero homeobox 2##NM_001080408|PROX2|283571|prospero homeobox 2##NM_001243007|PROX2|283571|prospero homeobox 2##BC023570|YLPM1|56252|YLP motif containing 1##AK095760|YLPM1|56252|YLP motif containing 1##NM_019589|YLPM1|56252|YLP motif containing 1##NM_001244883|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##NM_001933|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK289414|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248276|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK299505|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK316463|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK300396|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC000302|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC001922|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC002735|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248764|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##D16373|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##CR456727|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##L37418|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248774|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##NM_031464|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##BC036574|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK226137|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK054800|RPS6KL1|83694|ribosomal protein S6 kinase-like 1	0.773992	CTCF.p2:-24:0.774
chr17	55536632	55536770	reg1021336.p1	6.506	+	AK093888 AX748353 NM_170721	-202328	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-202728	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-373558	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	390703	-	AK000746 NM_017949	444048	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	495975	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.0	
chr20	52836478	52836633	reg1023799.p1	6.506	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	-11918	+	TSC_hg19_v1_chr20_+_52824396 NM_002623	-12108	+	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	-46035	-	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	255659	+	NM_080617	1743456	-	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	1987232	+	AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##NM_002623|PFDN4|5203|prefoldin subunit 4##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor	0.99925	CTCF.p2:0:0.999
chr13	110790151	110790282	reg1023009.p1	6.505	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	-351308	-	AB290159 AK127806 NM_001198950	-1508647	+	AB020672 BC146791 NM_015011 AL834447	-1541702	+	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	12519	-	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	169293	-	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	169405	+	NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2	0.948259	CTCF.p2:-13:0.948
chr16	88017111	88017213	reg1020992.p2	6.505	+	AK094158 NM_001173543	-13539	+	AK315535 NM_001173542	-23686	+	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	-31994	+	NM_001127464	476716	+	TSC_hg19_v1_chr16_+_88519687 AF488691	502543	+	TSC_hg19_v1_chr16_+_88519921 NM_153813	502803	+	AK094158|BANP|54971|BTG3 associated nuclear protein##NM_001173543|BANP|54971|BTG3 associated nuclear protein##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein##NM_001127464|ZNF469|84627|zinc finger protein 469##AF488691|ZFPM1|161882|zinc finger protein, multitype 1##NM_153813|ZFPM1|161882|zinc finger protein, multitype 1	0.925448	CTCF.p2:-12:0.925
chr7	84084001	84084104	reg1020748.p1	6.505	+	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-259730	-	NM_012431	-805574	-	AK303925 NM_001178129	-813306	-	NM_152754	667194	-	AK309116 TSC_hg19_v1_chr7_-_84816296	732183	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	2189173	+	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3	0.99943	CTCF.p2:24:0.999
chr9	103888938	103889088	reg1024808.p1	6.505	+	NM_207299 AK303807 TSC_hg19_v1_chr9_+_103791087	-97947	+	NM_001018116 AK300099 TSC_hg19_v1_chr9_+_103340380 EU487253 BC090888	-548624	+	TSC_hg19_v1_chr9_+_103235637 BC035056 DQ891732 DQ894909	-653284	+	AK000307 AK225306 BC029380 NM_017753 TSC_hg19_v1_chr9_+_103947336	58313	+	NM_001127610 AK315347	256809	-	L34081 BC039200 BC009567 NM_001701 BC107424	258262	-	NM_207299|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK303807|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_001018116|MURC|347273|muscle-related coiled-coil protein##AK300099|MURC|347273|muscle-related coiled-coil protein##EU487253|MURC|347273|muscle-related coiled-coil protein##BC090888|MURC|347273|muscle-related coiled-coil protein##BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_001127610|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##AK315347|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##L34081|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC039200|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC009567|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##NM_001701|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##BC107424|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)	0.270855	CTCF.p2:-24:0.271
chr1	27429418	27429506	reg1004475.p2	6.504	+	TSC_hg19_v1_chr1_-_27339448 AK122816	-90008	-	BC012790 BC014160 NM_052943 TSC_hg19_v1_chr1_-_27339338	-90128	-	TSC_hg19_v1_chr1_+_27320182 NM_001013642 BC069216	-109269	+	M96066 S68616 NM_003047 TSC_hg19_v1_chr1_-_27481521	51999	-	NM_015023 TSC_hg19_v1_chr1_+_27561056	131572	+	TSC_hg19_v1_chr1_+_27561124 AK315564	131665	+	AK122816|FAM46B|115572|family with sequence similarity 46, member B##BC012790|FAM46B|115572|family with sequence similarity 46, member B##BC014160|FAM46B|115572|family with sequence similarity 46, member B##NM_052943|FAM46B|115572|family with sequence similarity 46, member B##NM_001013642|TRNP1|388610|TMF1-regulated nuclear protein 1##BC069216|TRNP1|388610|TMF1-regulated nuclear protein 1##M96066|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##S68616|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_003047|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1	0.980221	
chr13	65777129	65777225	reg1020134.p1	6.504	+	AK289924 NM_022843	-3787523	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-3787924	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-4805698	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	2027327	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	4905364	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	6663082	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.928263	CTCF.p2:8:0.928
chr17	38571699	38571847	reg1022078.p1	6.504	+	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	-50827	-	NM_001024809	-73503	+	TSC_hg19_v1_chr17_+_38474548 AK130192	-97226	+	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	2351	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	28046	+	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	86073	-	AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_001024809|RARA|5914|retinoic acid receptor, alpha##AK130192|RARA|5914|retinoic acid receptor, alpha##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4	0.949024	CTCF.p2:6:0.949
chr17	73126878	73127023	reg1022086.p1	6.504	+	TSC_hg19_v1_chr17_+_73106069 AK300997 AK310697 BC011728 NM_024585	-20896	+	TSC_hg19_v1_chr17_+_73084056 BC009684 NM_004695	-42895	+	TSC_hg19_v1_chr17_+_73043325 D79998	-83617	+	TSC_hg19_v1_chr17_-_73127869 CU692564 BC002516 BC022334 BC008183 BC047763 BC017454 AF154829 AK000419 NM_001252377 NM_014595	907	-	DQ891909 DQ895094 DQ896835 EU176653 CU674698 AF177862 BC001420 TSC_hg19_v1_chr17_-_73150608 AF266846 AK223321 AK312613	23602	-	AY322169 AY322170 NM_001002032 NM_001002033 NM_016185 AF086910	23823	-	AK300997|ARMC7|79637|armadillo repeat containing 7##BC011728|ARMC7|79637|armadillo repeat containing 7##NM_024585|ARMC7|79637|armadillo repeat containing 7##BC009684|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##NM_004695|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##D79998|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic##AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic##DQ891909|HN1|51155|hematological and neurological expressed 1##DQ895094|HN1|51155|hematological and neurological expressed 1##DQ896835|HN1|51155|hematological and neurological expressed 1##EU176653|HN1|51155|hematological and neurological expressed 1##AF177862|HN1|51155|hematological and neurological expressed 1##BC001420|HN1|51155|hematological and neurological expressed 1##AF266846|HN1|51155|hematological and neurological expressed 1##AK223321|HN1|51155|hematological and neurological expressed 1##AK312613|HN1|51155|hematological and neurological expressed 1##AY322169|HN1|51155|hematological and neurological expressed 1##AY322170|HN1|51155|hematological and neurological expressed 1##NM_001002032|HN1|51155|hematological and neurological expressed 1##NM_001002033|HN1|51155|hematological and neurological expressed 1##NM_016185|HN1|51155|hematological and neurological expressed 1##AF086910|HN1|51155|hematological and neurological expressed 1	0.0	
chr2	229265861	229265959	reg1022348.p1	6.504	+	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-219548	-	AK097409 NM_178821 BC036377 AK098821 AK301861	-529558	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	-587319	+	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	870095	-	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	1313338	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	1520751	-	HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12	0.465918	CTCF.p2:-11:0.466
chr16	85752456	85752578	reg1021816.p1	6.503	+	BC003186 NM_016095 TSC_hg19_v1_chr16_-_85722590	-29918	-	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	-29975	-	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	-105564	+	TSC_hg19_v1_chr16_-_85784703 NM_206967	32171	-	BT007132 CU675661 AF005888 TSC_hg19_v1_chr16_-_85833151 BC007445 BC001472 BC005886 BC020250 AK313977 NM_001142288 NM_006067	80524	-	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	80716	+	BC003186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_016095|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##NM_206967|C16orf74|404550|chromosome 16 open reading frame 74##BT007132|COX4NB|10328|COX4 neighbor##AF005888|COX4NB|10328|COX4 neighbor##BC007445|COX4NB|10328|COX4 neighbor##BC001472|COX4NB|10328|COX4 neighbor##BC005886|COX4NB|10328|COX4 neighbor##BC020250|COX4NB|10328|COX4 neighbor##AK313977|COX4NB|10328|COX4 neighbor##NM_001142288|COX4NB|10328|COX4 neighbor##NM_006067|COX4NB|10328|COX4 neighbor##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1	1.003734	CTCF.p2:11:0.972
chr17	62733152	62733287	reg1021674.p2	6.503	+	TSC_hg19_v1_chr17_-_62658414 CR936721 NM_022739	-74854	-	TSC_hg19_v1_chr17_-_62658187 AY014180	-75037	-	AF310676 AB385561 AF301463 BC051283 BC093876 BC111945 TSC_hg19_v1_chr17_-_62658136	-75152	-	BC032382 TSC_hg19_v1_chr17_-_62777683 AK055342 BC120976 BC120977	44503	-	TSC_hg19_v1_chr17_-_62833238 AK301174 AK304173	100014	-	TSC_hg19_v1_chr17_-_62833261 BC034693 BC041324	100035	-	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC032382|LOC146880|146880|Rho GTPase activating protein 27 pseudogene##AK055342|LOC146880|146880|Rho GTPase activating protein 27 pseudogene##BC120976|LOC146880|146880|Rho GTPase activating protein 27 pseudogene##BC120977|LOC146880|146880|Rho GTPase activating protein 27 pseudogene##AK301174|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene##AK304173|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene##BC034693|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene	0.300652	CTCF.p2:-1:0.301
chr3	44277567	44277688	reg1020539.p1	6.503	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-545206	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-614114	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-614189	-	AK093476 AX748152 NM_001145030	5750	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	102003	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	102320	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.898103	CTCF.p2:2:0.898
chr5	134187173	134187271	reg1022183.p2	6.503	+	TSC_hg19_v1_chr5_+_134181739 BX648529 AJ437658	-5465	+	TSC_hg19_v1_chr5_+_134181685 NM_001135586 AK094881	-5596	+	BC053677 NM_152409	-5853	+	AK056512 NM_024715	22220	+	TSC_hg19_v1_chr5_+_134210061 BC001615 AK026278 AK225454 AK225462 BC032568 AK307529 BX538131 EU832512 EU832593	22830	+	TSC_hg19_v1_chr5_+_134240808 BC054021 AL136721 NM_032151	53563	+	BX648529|C5orf24|134553|chromosome 5 open reading frame 24##AJ437658|C5orf24|134553|chromosome 5 open reading frame 24##NM_001135586|C5orf24|134553|chromosome 5 open reading frame 24##AK094881|C5orf24|134553|chromosome 5 open reading frame 24##BC053677|C5orf24|134553|chromosome 5 open reading frame 24##NM_152409|C5orf24|134553|chromosome 5 open reading frame 24##AK056512|TXNDC15|79770|thioredoxin domain containing 15##NM_024715|TXNDC15|79770|thioredoxin domain containing 15##BC001615|TXNDC15|79770|thioredoxin domain containing 15##AK026278|TXNDC15|79770|thioredoxin domain containing 15##AK225454|TXNDC15|79770|thioredoxin domain containing 15##AK225462|TXNDC15|79770|thioredoxin domain containing 15##BC032568|TXNDC15|79770|thioredoxin domain containing 15##AK307529|TXNDC15|79770|thioredoxin domain containing 15##BX538131|TXNDC15|79770|thioredoxin domain containing 15##EU832512|TXNDC15|79770|thioredoxin domain containing 15##EU832593|TXNDC15|79770|thioredoxin domain containing 15##BC054021|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AL136721|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##NM_032151|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2	0.908229	CTCF.p2:-3:0.908
chr9	12719608	12719704	reg1020062.p1	6.503	+	NM_000550 X51420 BC052608	-26231	+	BC028038 NM_002839	-2106934	-	TSC_hg19_v1_chr9_+_8858136 AK094342	-3861523	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	55360	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	56125	+	AB384682 AF093419 BC140793 BC144564 NM_003829	530682	-	NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##HQ257895|C9orf150|286343|chromosome 9 open reading frame 150##AF093419|MPDZ|8777|multiple PDZ domain protein##BC140793|MPDZ|8777|multiple PDZ domain protein##BC144564|MPDZ|8777|multiple PDZ domain protein##NM_003829|MPDZ|8777|multiple PDZ domain protein	0.832467	CTCF.p2:-19:0.832
chr9	112905296	112905438	reg1025477.p1	6.502	+	NM_001136562 AK300427	-17575	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	-94404	+	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	-94458	+	NM_001012993	65045	-	AF065241 AF276919 CR407665 AF313911 AY004872 AF085844 BC003377 J04026 BC054866 TSC_hg19_v1_chr9_-_113018788 X77584	113385	-	TSC_hg19_v1_chr9_-_113018817 BX647247 D28376 AK289508	113458	-	NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001012993|C9orf152|401546|chromosome 9 open reading frame 152##AF065241|TXN|7295|thioredoxin##AF276919|TXN|7295|thioredoxin##CR407665|TXN|7295|thioredoxin##AF313911|TXN|7295|thioredoxin##AY004872|TXN|7295|thioredoxin##AF085844|TXN|7295|thioredoxin##BC003377|TXN|7295|thioredoxin##J04026|TXN|7295|thioredoxin##BC054866|TXN|7295|thioredoxin##X77584|TXN|7295|thioredoxin##BX647247|TXN|7295|thioredoxin##D28376|TXN|7295|thioredoxin##AK289508|TXN|7295|thioredoxin	0.919679	CTCF.p2:14:0.920
chr16	50388923	50389064	reg1021829.p2	6.501	+	NM_001114 D25538	-67170	+	TSC_hg19_v1_chr16_+_50308041 BC039891	-80940	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	-88517	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	13837	-	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	193333	+	TSC_hg19_v1_chr16_-_50647562 AK124375	258585	-	NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##AK093706|ADCY7|113|adenylate cyclase 7##AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)	0.999351	CTCF.p2:-20:0.999
chr2	157049157	157049293	reg1023864.p1	6.501	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-1494036	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-2320781	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-2713974	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	137465	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	139938	-	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	242733	+	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	0.439482	CTCF.p2:6:0.439
chr11	111169866	111169972	reg1018630.p2	6.500	+	BC039669 NM_198498	-43213	+	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	-586634	-	TSC_hg19_v1_chr11_-_110582887 AB037812	-586994	-	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	114	+	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	80033	-	NM_006235	80237	-	BC039669|C11orf53|341032|chromosome 11 open reading frame 53##NM_198498|C11orf53|341032|chromosome 11 open reading frame 53##AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20##AB037812|ARHGAP20|57569|Rho GTPase activating protein 20##AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##NM_006235|POU2AF1|5450|POU class 2 associating factor 1	0.0	
chr11	62648793	62648918	reg1021009.p3	6.500	+	TSC_hg19_v1_chr11_+_62648367 NM_001013251 AK304685 AK090758 AX746603 J03569 AK304497 AB018010 J02939 AK225304 J02769 EU832612 EU832683	-348	+	TSC_hg19_v1_chr11_+_62623580 NM_001012662 NM_001012664 NM_002394 BC001061 AK025584 BC003000	-25305	+	BC000839 BC027980 BC011809 BC017253 BC063571 TSC_hg19_v1_chr11_-_62623358 AK095849	-25570	-	TSC_hg19_v1_chr11_+_62649170 AK308797 AK311592 AF055031	337	+	BC007740 AK312374 TSC_hg19_v1_chr11_-_62688827	39928	-	BC022984 NM_000738 AJ006520 TSC_hg19_v1_chr11_-_62689135	40218	-	NM_001013251|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK304685|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK090758|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##J03569|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK304497|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AB018010|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##J02939|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK225304|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##J02769|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##EU832612|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##EU832683|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_001012662|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_001012664|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_002394|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC001061|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK025584|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC003000|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC000839|SNHG1|23642|small nucleolar RNA host gene 1 (non-protein coding)##BC027980|SNHG1|23642|small nucleolar RNA host gene 1 (non-protein coding)##BC011809|SNHG1|23642|small nucleolar RNA host gene 1 (non-protein coding)##BC017253|SNHG1|23642|small nucleolar RNA host gene 1 (non-protein coding)##BC063571|SNHG1|23642|small nucleolar RNA host gene 1 (non-protein coding)##AK095849|SNHG1|23642|small nucleolar RNA host gene 1 (non-protein coding)##AK308797|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK311592|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AF055031|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC007740|CHRM1|1128|cholinergic receptor, muscarinic 1##AK312374|CHRM1|1128|cholinergic receptor, muscarinic 1##BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1##NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1##AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1	0.01635	
chr11	85537281	85537374	reg1022229.p1	6.500	+	TSC_hg19_v1_chr11_-_85522185 AB046817 NM_032943 AK296224 AK296740	-15146	-	BC136450 BC144114 BC144115 NM_001162951 NM_001162953	-68284	-	BX647671 AK127504 NM_206927 NM_206928	-99844	-	AK124113 NM_173556	28816	+	AB451308 BC048259 U45976 BC073961 TSC_hg19_v1_chr11_-_85779975	242571	-	TSC_hg19_v1_chr11_-_85780088 BC064357	242768	-	AB046817|SYTL2|54843|synaptotagmin-like 2##NM_032943|SYTL2|54843|synaptotagmin-like 2##AK296224|SYTL2|54843|synaptotagmin-like 2##AK296740|SYTL2|54843|synaptotagmin-like 2##BC136450|SYTL2|54843|synaptotagmin-like 2##BC144114|SYTL2|54843|synaptotagmin-like 2##BC144115|SYTL2|54843|synaptotagmin-like 2##NM_001162951|SYTL2|54843|synaptotagmin-like 2##NM_001162953|SYTL2|54843|synaptotagmin-like 2##BX647671|SYTL2|54843|synaptotagmin-like 2##AK127504|SYTL2|54843|synaptotagmin-like 2##NM_206927|SYTL2|54843|synaptotagmin-like 2##NM_206928|SYTL2|54843|synaptotagmin-like 2##AK124113|CCDC83|220047|coiled-coil domain containing 83##NM_173556|CCDC83|220047|coiled-coil domain containing 83##AB451308|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC048259|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##U45976|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC073961|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC064357|PICALM|8301|phosphatidylinositol binding clathrin assembly protein	0.016312	
chr12	118873942	118874096	reg1026108.p1	6.500	+	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	-59617	+	TSC_hg19_v1_chr12_-_118810713 NM_016281	-63289	-	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	-63391	-	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	545328	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	742660	+	BC040553 NM_178499	898497	+	BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_016281|TAOK3|51347|TAO kinase 3##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60	0.861079	CTCF.p2:-5:0.861
chr1	64003751	64003871	reg1021893.p1	6.500	+	AK292220 NM_032437 AK092219 TSC_hg19_v1_chr1_+_63989242 AK315850 AB058702 BC015814	-14672	+	AK309622 AF175306 BC009929 TSC_hg19_v1_chr1_-_63988878 BC014385 AK312944 NM_001206739 NM_014288	-14930	-	AK022700 TSC_hg19_v1_chr1_+_63833329 BC001253 AF102851	-170481	+	TSC_hg19_v1_chr1_+_64059081 AK294186 BC019920 NM_002633 BC001756 BC067763 AK312254 M83088 BC090856 DQ890618 DQ893786 CU676478 BT006961	55214	+	AK293298 NM_001172819 AK298505	55703	+	NM_001172818 AK300100	85082	+	AK292220|EFCAB7|84455|EF-hand calcium binding domain 7##NM_032437|EFCAB7|84455|EF-hand calcium binding domain 7##AK092219|EFCAB7|84455|EF-hand calcium binding domain 7##AK315850|EFCAB7|84455|EF-hand calcium binding domain 7##AB058702|EFCAB7|84455|EF-hand calcium binding domain 7##BC015814|EFCAB7|84455|EF-hand calcium binding domain 7##AK309622|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AF175306|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##BC009929|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##BC014385|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AK312944|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##NM_001206739|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##NM_014288|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AK294186|PGM1|5236|phosphoglucomutase 1##BC019920|PGM1|5236|phosphoglucomutase 1##NM_002633|PGM1|5236|phosphoglucomutase 1##BC001756|PGM1|5236|phosphoglucomutase 1##BC067763|PGM1|5236|phosphoglucomutase 1##AK312254|PGM1|5236|phosphoglucomutase 1##M83088|PGM1|5236|phosphoglucomutase 1##BC090856|PGM1|5236|phosphoglucomutase 1##DQ890618|PGM1|5236|phosphoglucomutase 1##DQ893786|PGM1|5236|phosphoglucomutase 1##BT006961|PGM1|5236|phosphoglucomutase 1##AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1	0.0	
chr4	61330019	61330089	reg1027878.p1	6.500	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-3353486	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-3353522	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-3353655	-	TSC_hg19_v1_chr4_+_62066948 AK309793	736921	+	NM_015236	1032784	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	3945042	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.310291	CTCF.p2:-24:0.310
chr5	112027493	112027630	reg1023711.p1	6.500	+	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	-272688	-	TSC_hg19_v1_chr5_+_111496560 AB002437	-530992	+	AK298779 NM_001142474 NM_001142475	-714987	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	15650	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	46012	+	NM_001204193 NM_001204194 NM_001204196 NM_001204199 NM_003135 TSC_hg19_v1_chr5_+_112196975	169368	+	AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli##NM_001204193|SRP19|6728|signal recognition particle 19kDa##NM_001204194|SRP19|6728|signal recognition particle 19kDa##NM_001204196|SRP19|6728|signal recognition particle 19kDa##NM_001204199|SRP19|6728|signal recognition particle 19kDa##NM_003135|SRP19|6728|signal recognition particle 19kDa	0.420587	CTCF.p2:1:0.421
chr1	154439420	154439533	reg1019940.p1	6.499	+	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	-61402	+	AK223582 BC132684 BC132686 TSC_hg19_v1_chr1_+_154377856	-61624	+	NM_000565 NM_001206866 NM_181359 X12830 BC089410 TSC_hg19_v1_chr1_+_154377822	-61726	+	BC143765 BC117210 NM_001010846	35048	-	BC044864 NM_001098475 NM_182499	35218	+	BC107057 AY112698 TSC_hg19_v1_chr1_-_154531132 AY948200 NM_017582	91633	-	AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor##AK223582|IL6R|3570|interleukin 6 receptor##BC132684|IL6R|3570|interleukin 6 receptor##BC132686|IL6R|3570|interleukin 6 receptor##NM_000565|IL6R|3570|interleukin 6 receptor##NM_001206866|IL6R|3570|interleukin 6 receptor##NM_181359|IL6R|3570|interleukin 6 receptor##X12830|IL6R|3570|interleukin 6 receptor##BC089410|IL6R|3570|interleukin 6 receptor##BC143765|SHE|126669|Src homology 2 domain containing E##BC117210|SHE|126669|Src homology 2 domain containing E##NM_001010846|SHE|126669|Src homology 2 domain containing E##BC044864|TDRD10|126668|tudor domain containing 10##NM_001098475|TDRD10|126668|tudor domain containing 10##NM_182499|TDRD10|126668|tudor domain containing 10##BC107057|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY112698|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY948200|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##NM_017582|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1	0.041685	
chr3	73046921	73047070	reg1023519.p1	6.499	+	TSC_hg19_v1_chr3_+_73046081 AF327345 NM_174907 BC128136 BC128137	-875	+	TSC_hg19_v1_chr3_+_73045984 BC110889	-1004	+	TSC_hg19_v1_chr3_+_73045961 AK289901 BC100281	-1038	+	BC051316 BC064501 NM_018029	63814	+	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	627043	-	AB384611 BC150608 NM_020872	1523307	-	AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)	0.271448	CTCF.p2:27:0.271
chr9	117673619	117673741	reg1022143.p1	6.499	+	AB590753 AK291642 BC074940 BC074941 BC069435 AK313721 BC104462 BC104463 NM_005118 AF520785	-105329	-	AY434464 NM_001204344	-118871	-	NM_001199233	-229312	-	AK313619 NM_001244 NM_001252290	19194	-	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	206793	-	AB022761 NM_017418	230416	+	AK291642|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074940|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074941|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC069435|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313721|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104462|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104463|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_005118|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AF520785|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AY434464|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001204344|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001199233|LOC100505478|100505478|uncharacterized LOC100505478##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1	0.756155	CTCF.p2:-2:0.756
chr15	84241002	84241104	reg1020317.p1	6.498	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-124825	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-124993	+	L03427 NM_001717 TSC_hg19_v1_chr15_-_83953480	-287575	-	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	81774	+	NM_001243531	600188	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	903228	+	BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##L03427|BNC1|646|basonuclin 1##NM_001717|BNC1|646|basonuclin 1##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2	0.523092	CTCF.p2:-2:0.523
chr6	110187330	110187417	reg1018200.p1	6.498	+	TSC_hg19_v1_chr6_+_110012521 AK222732	-174849	+	TSC_hg19_v1_chr6_+_110012514 AK291671 AK293422 D87464	-174865	+	NM_014845 TSC_hg19_v1_chr6_+_110012488 BC041338	-174917	+	BC126301 BC117298 BC043414 NM_005284 HQ258210 HQ258216 HQ709190 HQ709191	112883	+	TSC_hg19_v1_chr6_-_110500864 BC019019 BC021022 BC044591 AK097838 BC068546	313470	-	TSC_hg19_v1_chr6_-_110501166 NM_001024934 NM_001024935 NM_001024936 NM_003931	313812	-	AK222732|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK291671|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK293422|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##D87464|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##NM_014845|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##BC041338|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##BC126301|GPR6|2830|G protein-coupled receptor 6##BC117298|GPR6|2830|G protein-coupled receptor 6##BC043414|GPR6|2830|G protein-coupled receptor 6##NM_005284|GPR6|2830|G protein-coupled receptor 6##HQ258210|GPR6|2830|G protein-coupled receptor 6##HQ258216|GPR6|2830|G protein-coupled receptor 6##HQ709190|GPR6|2830|G protein-coupled receptor 6##BC044591|WASF1|8936|WAS protein family, member 1##AK097838|WASF1|8936|WAS protein family, member 1##BC068546|WASF1|8936|WAS protein family, member 1##NM_001024934|WASF1|8936|WAS protein family, member 1##NM_001024935|WASF1|8936|WAS protein family, member 1##NM_001024936|WASF1|8936|WAS protein family, member 1##NM_003931|WASF1|8936|WAS protein family, member 1	0.0	
chr7	116652857	116652957	reg1021876.p1	6.498	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	-59334	+	TSC_hg19_v1_chr7_+_116593397 BC075855 NM_018412 NM_021908 AF234882 AF234883	-59522	+	TSC_hg19_v1_chr7_+_116502640 BC005338 AK293405 AK294409 AK315915 AK222989 AK223004 U03269 BC015963 BT006735 CU675123 U03851	-150275	+	TSC_hg19_v1_chr7_+_116660271 AK093212	7360	+	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	7458	+	BC078170 AK056742 NM_003391 X07876	310428	-	AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##BC075855|ST7|7982|suppression of tumorigenicity 7##NM_018412|ST7|7982|suppression of tumorigenicity 7##NM_021908|ST7|7982|suppression of tumorigenicity 7##AF234882|ST7|7982|suppression of tumorigenicity 7##AF234883|ST7|7982|suppression of tumorigenicity 7##BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK093212|ST7|7982|suppression of tumorigenicity 7##AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2	0.0	
chr14	92325041	92325180	reg1022777.p1	6.497	+	TSC_hg19_v1_chr14_-_92302762 BC040503 BX647828 AK126359 NM_001128595 NM_152332	-22318	-	BC126214 BC126216 AK126034 NM_024764	-126713	-	TSC_hg19_v1_chr14_-_91976823 AK000714 BC038932 BC022778	-348303	-	AK093876 AX748346 NM_001128596 TSC_hg19_v1_chr14_-_92333881	8758	-	AF112152 AF093118 BX248290 BC022280 TSC_hg19_v1_chr14_-_92413757 AK075147	88664	-	TSC_hg19_v1_chr14_-_92414010 AY358898 NM_006329	88914	-	BC040503|TC2N|123036|tandem C2 domains, nuclear##BX647828|TC2N|123036|tandem C2 domains, nuclear##AK126359|TC2N|123036|tandem C2 domains, nuclear##NM_001128595|TC2N|123036|tandem C2 domains, nuclear##NM_152332|TC2N|123036|tandem C2 domains, nuclear##BC126214|CATSPERB|79820|cation channel, sperm-associated, beta##BC126216|CATSPERB|79820|cation channel, sperm-associated, beta##AK126034|CATSPERB|79820|cation channel, sperm-associated, beta##NM_024764|CATSPERB|79820|cation channel, sperm-associated, beta##AK000714|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##BC038932|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##BC022778|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AK093876|TC2N|123036|tandem C2 domains, nuclear##NM_001128596|TC2N|123036|tandem C2 domains, nuclear##AF112152|FBLN5|10516|fibulin 5##AF093118|FBLN5|10516|fibulin 5##BX248290|FBLN5|10516|fibulin 5##BC022280|FBLN5|10516|fibulin 5##AK075147|FBLN5|10516|fibulin 5##AY358898|FBLN5|10516|fibulin 5##NM_006329|FBLN5|10516|fibulin 5	0.0	
chr10	31780167	31780294	reg1020732.p2	6.496	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-170141	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-172097	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-172273	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	437494	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	437555	-	TSC_hg19_v1_chr10_-_32344938 AB462413	564702	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.247521	CTCF.p2:15:0.248
chr20	35905137	35905317	reg1022009.p1	6.496	+	X00094 BC098109 BC098161 BC099727 NM_001184731 NM_021081	-19940	-	AB527120 AM392522 AM392819 TSC_hg19_v1_chr20_-_35807952 BC030006 BC057767 NM_152503 NM_213631 NM_213632 AK093432 AX748122	-97290	-	TSC_hg19_v1_chr20_+_35807749 AK308683 CR456899 DQ892347 DQ895552	-97474	+	TSC_hg19_v1_chr20_+_35918057 AK292971 NM_001003897 NM_022077	12808	+	TSC_hg19_v1_chr20_+_35918065 BC016822 BC014672	12858	+	TSC_hg19_v1_chr20_+_35973086 AF272982 NM_005417	67866	+	X00094|GHRH|2691|growth hormone releasing hormone##BC098109|GHRH|2691|growth hormone releasing hormone##BC098161|GHRH|2691|growth hormone releasing hormone##BC099727|GHRH|2691|growth hormone releasing hormone##NM_001184731|GHRH|2691|growth hormone releasing hormone##NM_021081|GHRH|2691|growth hormone releasing hormone##AM392522|C20orf132|140699|chromosome 20 open reading frame 132##AM392819|C20orf132|140699|chromosome 20 open reading frame 132##BC030006|C20orf132|140699|chromosome 20 open reading frame 132##BC057767|C20orf132|140699|chromosome 20 open reading frame 132##NM_152503|C20orf132|140699|chromosome 20 open reading frame 132##NM_213631|C20orf132|140699|chromosome 20 open reading frame 132##NM_213632|C20orf132|140699|chromosome 20 open reading frame 132##AK093432|C20orf132|140699|chromosome 20 open reading frame 132##AK308683|RPN2|6185|ribophorin II##CR456899|RPN2|6185|ribophorin II##DQ892347|RPN2|6185|ribophorin II##DQ895552|RPN2|6185|ribophorin II##AK292971|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_001003897|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_022077|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC016822|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC014672|MANBAL|63905|mannosidase, beta A, lysosomal-like##AF272982|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005417|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	0.0	
chr1	1891612	1891725	reg1023268.p1	6.495	+	AB528804 GQ129259 GQ129260 TSC_hg19_v1_chr1_-_1850719 NM_178545	-40947	-	AF490905 AY566229 NM_138705	-45403	+	TSC_hg19_v1_chr1_-_1822565 AK122949	-69100	-	AK127388 NM_001080484	43607	-	TSC_hg19_v1_chr1_+_1950794 NM_000815 AK290861 BC033801 AB385062 DQ892050 AF016917	59135	+	TSC_hg19_v1_chr1_+_1981920 BC014270 NM_002744 BC008058 AB464093 DQ892929 DQ893922 DQ896178 CU675909 AK290995 BT007082 L14283 Z15108	90326	+	GQ129259|TMEM52|339456|transmembrane protein 52##GQ129260|TMEM52|339456|transmembrane protein 52##NM_178545|TMEM52|339456|transmembrane protein 52##AF490905|CALML6|163688|calmodulin-like 6##AY566229|CALML6|163688|calmodulin-like 6##NM_138705|CALML6|163688|calmodulin-like 6##AK122949|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##AK127388|KIAA1751|85452|KIAA1751##NM_001080484|KIAA1751|85452|KIAA1751##NM_000815|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##AK290861|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##BC033801|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##DQ892050|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##AF016917|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##BC014270|PRKCZ|5590|protein kinase C, zeta##NM_002744|PRKCZ|5590|protein kinase C, zeta##BC008058|PRKCZ|5590|protein kinase C, zeta##DQ892929|PRKCZ|5590|protein kinase C, zeta##DQ893922|PRKCZ|5590|protein kinase C, zeta##DQ896178|PRKCZ|5590|protein kinase C, zeta##AK290995|PRKCZ|5590|protein kinase C, zeta##BT007082|PRKCZ|5590|protein kinase C, zeta##L14283|PRKCZ|5590|protein kinase C, zeta##Z15108|PRKCZ|5590|protein kinase C, zeta	0.34058	CTCF.p2:-4:0.341
chr16	58877711	58877880	reg1022494.p1	6.495	+	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-109598	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-159139	-	TSC_hg19_v1_chr16_-_58663742 BC040523 AL833549 NM_016284 NM_206999	-214050	-	AK124734 NM_001796	3192943	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	6278107	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	6278173	-	DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.336422	CTCF.p2:-4:0.336
chr17	66768117	66768215	reg1016061.p1	6.495	+	AK056789 BC136686 BC136689 AY358197 NM_001243746 NM_017565 TSC_hg19_v1_chr17_-_66597112	-171143	-	AK298071 TSC_hg19_v1_chr17_-_66596742	-171427	-	TSC_hg19_v1_chr17_+_66508570 BC036285 S54705 AK124586 AK312307 CR749311 M18468 M33336	-259567	+	BC130280 BC143971 BC143972 AK304286 BC010392 AB020629 BC047765 BC094689 AK304360 AK295876 BC037309 BC024003 NM_007168	183290	-	BC062472 AK057068 AY028899 NM_080283	288924	-	BC125231 BC125232 AY028898 NM_080284 TSC_hg19_v1_chr17_-_67138037 BC070125 AK308431 BC029852	369909	-	AK056789|FAM20A|54757|family with sequence similarity 20, member A##BC136686|FAM20A|54757|family with sequence similarity 20, member A##BC136689|FAM20A|54757|family with sequence similarity 20, member A##AY358197|FAM20A|54757|family with sequence similarity 20, member A##NM_001243746|FAM20A|54757|family with sequence similarity 20, member A##NM_017565|FAM20A|54757|family with sequence similarity 20, member A##AK298071|FAM20A|54757|family with sequence similarity 20, member A##BC036285|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##S54705|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK124586|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK312307|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##CR749311|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M18468|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M33336|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	0.867388	CTCF.p2:0:0.867
chr18	21589720	21589853	reg1022606.p1	6.495	+	AK091080 AX746769 NM_153211 BC121034 BC121035	-16992	+	TSC_hg19_v1_chr18_+_21452983 NM_000227 NM_001127718 X85107 X84392 AY327114 L34155	-136775	+	TSC_hg19_v1_chr18_+_21269563 BC093406 NM_001127717 NM_198129 AY327115 AY327116	-320199	+	TSC_hg19_v1_chr18_+_21594449 BC016833 NM_001135993 NM_001243425	4613	+	TSC_hg19_v1_chr18_+_21594754 AK074875	4970	+	AK296442 TSC_hg19_v1_chr18_+_21693341	103542	+	AK091080|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_153211|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121034|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121035|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_000227|LAMA3|3909|laminin, alpha 3##NM_001127718|LAMA3|3909|laminin, alpha 3##X85107|LAMA3|3909|laminin, alpha 3##X84392|LAMA3|3909|laminin, alpha 3##AY327114|LAMA3|3909|laminin, alpha 3##L34155|LAMA3|3909|laminin, alpha 3##BC093406|LAMA3|3909|laminin, alpha 3##NM_001127717|LAMA3|3909|laminin, alpha 3##NM_198129|LAMA3|3909|laminin, alpha 3##AY327115|LAMA3|3909|laminin, alpha 3##AY327116|LAMA3|3909|laminin, alpha 3##BC016833|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001135993|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001243425|TTC39C|125488|tetratricopeptide repeat domain 39C##AK074875|TTC39C|125488|tetratricopeptide repeat domain 39C##AK296442|TTC39C|125488|tetratricopeptide repeat domain 39C	0.109213	
chr9	113800347	113800453	reg1020857.p2	6.495	+	NM_001166280 NM_001166281 NM_005592 AF006464 BC109098 BC109099 EU832778 EU832779 GQ129313	-369284	+	TSC_hg19_v1_chr9_-_113342011 AJ619977 AY243503 AK122605 BC030816 NM_153366	-458336	-	HQ258720 AF305830 BC130549 BC130551 BC144461 BC035743 NM_001003936	-700300	-	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	12	-	AK298590 TSC_hg19_v1_chr9_-_113801086	633	-	TSC_hg19_v1_chr9_-_113801481 AK290287	1102	-	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1##AK298590|LPAR1|1902|lysophosphatidic acid receptor 1##AK290287|LPAR1|1902|lysophosphatidic acid receptor 1	0.024706	
chr1	163285674	163285812	reg1022389.p1	6.494	+	TSC_hg19_v1_chr1_-_163172866 NM_003617	-112831	-	AB528222 AF493929 AJ891044 AM393870 DQ892138 DQ895332 NM_001195303 CU688814 AF159570 BC030059 TSC_hg19_v1_chr1_-_163172703 AF030108 AB008109 AK315357 BX537427	-113078	-	AK026775 AF113212 AF176919 AF172821 TSC_hg19_v1_chr1_-_163114163	-171689	-	TSC_hg19_v1_chr1_-_163291574 BC032239	5818	-	NM_031423 NM_145697 TSC_hg19_v1_chr1_+_163291746 AK093348 AX748068 AF326731 BC008489 AB050577	6033	+	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	1242848	+	NM_003617|RGS5|8490|regulator of G-protein signaling 5##AF493929|RGS5|8490|regulator of G-protein signaling 5##AJ891044|RGS5|8490|regulator of G-protein signaling 5##AM393870|RGS5|8490|regulator of G-protein signaling 5##DQ892138|RGS5|8490|regulator of G-protein signaling 5##DQ895332|RGS5|8490|regulator of G-protein signaling 5##NM_001195303|RGS5|8490|regulator of G-protein signaling 5##AF159570|RGS5|8490|regulator of G-protein signaling 5##BC030059|RGS5|8490|regulator of G-protein signaling 5##AF030108|RGS5|8490|regulator of G-protein signaling 5##AB008109|RGS5|8490|regulator of G-protein signaling 5##AK315357|RGS5|8490|regulator of G-protein signaling 5##BX537427|RGS5|8490|regulator of G-protein signaling 5##AK026775|RGS5|8490|regulator of G-protein signaling 5##AF113212|RGS5|8490|regulator of G-protein signaling 5##AF176919|RGS5|8490|regulator of G-protein signaling 5##AF172821|RGS5|8490|regulator of G-protein signaling 5##NM_031423|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_145697|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK093348|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AF326731|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC008489|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AB050577|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1	0.321385	CTCF.p2:27:0.321
chr19	51227761	51227881	reg1022849.p1	6.494	+	TSC_hg19_v1_chr19_+_51226662 AY870345 AB009244 AB528595 BT019673 CU675163	-1099	+	TSC_hg19_v1_chr19_+_51226653 BC005810 D86586	-1173	+	TSC_hg19_v1_chr19_+_51226620 AF020044 NM_002975 AK314141	-1208	+	BC095544 BC067453 BC067454 NM_001506	45967	+	AB463389 NM_033068	65850	+	TSC_hg19_v1_chr19_-_51307892 NM_199250 NM_199249	80098	-	AY870345|CLEC11A|6320|C-type lectin domain family 11, member A##AB009244|CLEC11A|6320|C-type lectin domain family 11, member A##BT019673|CLEC11A|6320|C-type lectin domain family 11, member A##BC005810|CLEC11A|6320|C-type lectin domain family 11, member A##D86586|CLEC11A|6320|C-type lectin domain family 11, member A##AF020044|CLEC11A|6320|C-type lectin domain family 11, member A##NM_002975|CLEC11A|6320|C-type lectin domain family 11, member A##AK314141|CLEC11A|6320|C-type lectin domain family 11, member A##BC095544|GPR32|2854|G protein-coupled receptor 32##BC067453|GPR32|2854|G protein-coupled receptor 32##BC067454|GPR32|2854|G protein-coupled receptor 32##NM_001506|GPR32|2854|G protein-coupled receptor 32##NM_033068|ACPT|93650|acid phosphatase, testicular##NM_199250|C19orf48|84798|chromosome 19 open reading frame 48##NM_199249|C19orf48|84798|chromosome 19 open reading frame 48	0.066297	
chrX	10294798	10294916	reg1020700.p2	6.494	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	-169803	+	BC098455 NM_015691	-311064	+	NM_001195081	-359460	+	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	240702	-	AF035360 NM_001193277 AY112903	250047	-	AF230976 AF230977 Y13667 AK226104 AK315095 BC053626 AK291215 TSC_hg19_v1_chrX_-_10588583 AY112901 AK297205 NM_000381 NM_033289	293708	-	NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112903|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF230976|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF230977|MID1|4281|midline 1 (Opitz/BBB syndrome)##Y13667|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK226104|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK315095|MID1|4281|midline 1 (Opitz/BBB syndrome)##BC053626|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK291215|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112901|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK297205|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_000381|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_033289|MID1|4281|midline 1 (Opitz/BBB syndrome)	0.908228	CTCF.p2:5:0.908
chrX	38119657	38119783	reg1022270.p2	6.494	+	TSC_hg19_v1_chrX_-_38080117 AB527644 CU676640 U61374 U78093 AK298802 AK289430 BC020684 AK293127 AK125542 NM_001170750 NM_001170751 NM_001170752 NM_006307	-39595	-	NM_001163334	-226934	+	BX647688 NM_001163335 NM_138780 TSC_hg19_v1_chrX_+_37865853 AK125106	-253870	+	X97668 CU689206 AJ238395 U57629 TSC_hg19_v1_chrX_-_38186763 BC031624 AK223491 DQ980616	66975	-	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	67075	-	BC107153 BC107154 NM_000531 BC114496 AK292757 K02100 BC074745	92104	+	U61374|SRPX|8406|sushi-repeat containing protein, X-linked##U78093|SRPX|8406|sushi-repeat containing protein, X-linked##AK298802|SRPX|8406|sushi-repeat containing protein, X-linked##AK289430|SRPX|8406|sushi-repeat containing protein, X-linked##BC020684|SRPX|8406|sushi-repeat containing protein, X-linked##AK293127|SRPX|8406|sushi-repeat containing protein, X-linked##AK125542|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170750|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170751|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001170752|SRPX|8406|sushi-repeat containing protein, X-linked##NM_006307|SRPX|8406|sushi-repeat containing protein, X-linked##NM_001163334|SYTL5|94122|synaptotagmin-like 5##BX647688|SYTL5|94122|synaptotagmin-like 5##NM_001163335|SYTL5|94122|synaptotagmin-like 5##NM_138780|SYTL5|94122|synaptotagmin-like 5##AK125106|SYTL5|94122|synaptotagmin-like 5##X97668|RPGR|6103|retinitis pigmentosa GTPase regulator##AJ238395|RPGR|6103|retinitis pigmentosa GTPase regulator##U57629|RPGR|6103|retinitis pigmentosa GTPase regulator##BC031624|RPGR|6103|retinitis pigmentosa GTPase regulator##AK223491|RPGR|6103|retinitis pigmentosa GTPase regulator##DQ980616|RPGR|6103|retinitis pigmentosa GTPase regulator##DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator##BC107153|OTC|5009|ornithine carbamoyltransferase##BC107154|OTC|5009|ornithine carbamoyltransferase##NM_000531|OTC|5009|ornithine carbamoyltransferase##BC114496|OTC|5009|ornithine carbamoyltransferase##AK292757|OTC|5009|ornithine carbamoyltransferase##K02100|OTC|5009|ornithine carbamoyltransferase##BC074745|OTC|5009|ornithine carbamoyltransferase	0.0	
chr1	145524777	145524895	reg1022585.p1	6.493	+	NM_001184795 AK301983	-8257	+	TSC_hg19_v1_chr1_+_145516386 AB018080 BC011963 CU680134 AF093670 AK023991 CR542047	-8479	+	NM_003846	-8672	+	AF112345 NM_003637 BC140831 BC144637 TSC_hg19_v1_chr1_+_145525029 AK304155 AK304183	175	+	AK314255 TSC_hg19_v1_chr1_+_145525041 AF074015	209	+	NM_144698 AK294308 AK091120 AK296861 AX746788 BC101618 BC101620	24398	+	NM_001184795|PEX11B|8799|peroxisomal biogenesis factor 11 beta##AK301983|PEX11B|8799|peroxisomal biogenesis factor 11 beta##AB018080|PEX11B|8799|peroxisomal biogenesis factor 11 beta##BC011963|PEX11B|8799|peroxisomal biogenesis factor 11 beta##AF093670|PEX11B|8799|peroxisomal biogenesis factor 11 beta##AK023991|PEX11B|8799|peroxisomal biogenesis factor 11 beta##CR542047|PEX11B|8799|peroxisomal biogenesis factor 11 beta##NM_003846|PEX11B|8799|peroxisomal biogenesis factor 11 beta##AF112345|ITGA10|8515|integrin, alpha 10##NM_003637|ITGA10|8515|integrin, alpha 10##BC140831|ITGA10|8515|integrin, alpha 10##BC144637|ITGA10|8515|integrin, alpha 10##AK304155|ITGA10|8515|integrin, alpha 10##AK304183|ITGA10|8515|integrin, alpha 10##AK314255|ITGA10|8515|integrin, alpha 10##AF074015|ITGA10|8515|integrin, alpha 10##NM_144698|ANKRD35|148741|ankyrin repeat domain 35##AK294308|ANKRD35|148741|ankyrin repeat domain 35##AK091120|ANKRD35|148741|ankyrin repeat domain 35##AK296861|ANKRD35|148741|ankyrin repeat domain 35##BC101618|ANKRD35|148741|ankyrin repeat domain 35##BC101620|ANKRD35|148741|ankyrin repeat domain 35	0.998279	CTCF.p2:11:0.998
chr3	70408247	70408373	reg1023149.p1	6.493	+	TSC_hg19_v1_chr3_+_70048883 BC015590	-359422	+	NM_000248 NM_001184968 NM_198158 NM_198178 Z29678 BC012503 BC065243 BC026961 GU355676	-422499	+	NM_198177 AB006989 AK297858	-492909	+	TSC_hg19_v1_chr3_-_71114076 AK074569 NM_001244813	705886	-	TSC_hg19_v1_chr3_-_71179732 AK027264	771413	-	AK297649 TSC_hg19_v1_chr3_-_71179738 BX647682	771430	-	NM_000248|MITF|4286|microphthalmia-associated transcription factor##NM_001184968|MITF|4286|microphthalmia-associated transcription factor##NM_198158|MITF|4286|microphthalmia-associated transcription factor##NM_198178|MITF|4286|microphthalmia-associated transcription factor##Z29678|MITF|4286|microphthalmia-associated transcription factor##BC012503|MITF|4286|microphthalmia-associated transcription factor##BC065243|MITF|4286|microphthalmia-associated transcription factor##BC026961|MITF|4286|microphthalmia-associated transcription factor##GU355676|MITF|4286|microphthalmia-associated transcription factor##NM_198177|MITF|4286|microphthalmia-associated transcription factor##AB006989|MITF|4286|microphthalmia-associated transcription factor##AK297858|MITF|4286|microphthalmia-associated transcription factor##AK074569|FOXP1|27086|forkhead box P1##NM_001244813|FOXP1|27086|forkhead box P1##AK027264|FOXP1|27086|forkhead box P1##AK297649|FOXP1|27086|forkhead box P1##BX647682|FOXP1|27086|forkhead box P1	0.996681	CTCF.p2:7:0.997
chr3	71979904	71980016	reg1021864.p1	6.492	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-145689	-	AK313656 NM_173359	-176037	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-176438	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	917588	-	BC017274 TSC_hg19_v1_chr3_-_72897575	917615	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	917632	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.37378	CTCF.p2:-25:0.374
chr3	87553190	87553300	reg1022550.p1	6.492	+	AB587506 L18781 X72215 X62429 D10216 NM_000306 NM_001122757	-227572	-	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	-276710	+	BC094780 TSC_hg19_v1_chr3_-_87040272	-512975	-	NM_000866	478480	+	BC052980 TSC_hg19_v1_chr3_-_88108150 AL117392 NM_001008390 NM_003663	554898	-	AF543494 NM_018293	635016	+	L18781|POU1F1|5449|POU class 1 homeobox 1##X72215|POU1F1|5449|POU class 1 homeobox 1##X62429|POU1F1|5449|POU class 1 homeobox 1##D10216|POU1F1|5449|POU class 1 homeobox 1##NM_000306|POU1F1|5449|POU class 1 homeobox 1##NM_001122757|POU1F1|5449|POU class 1 homeobox 1##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_000866|HTR1F|3355|5-hydroxytryptamine (serotonin) receptor 1F##BC052980|CGGBP1|8545|CGG triplet repeat binding protein 1##AL117392|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_001008390|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_003663|CGGBP1|8545|CGG triplet repeat binding protein 1##AF543494|ZNF654|55279|zinc finger protein 654##NM_018293|ZNF654|55279|zinc finger protein 654	0.992839	CTCF.p2:-3:0.993
chr5	154352189	154352315	reg1023112.p1	6.492	+	TSC_hg19_v1_chr5_+_154320654 NM_001014990 NM_014180 AK000601 AK302784 CR933679 BC012565 AF161507 CU680362	-31603	+	TSC_hg19_v1_chr5_-_154317760 AB385260 AY063750 AK022748 BC113614 BC143724 BC036894 BC040931 AK074066 AK315101 NM_001252156 NM_015465	-34536	-	TSC_hg19_v1_chr5_+_154238213 AK297381 BC017366	-114010	+	NM_001099293 AK302388	41034	+	BX537948 NM_000337 NM_001128209 NM_172244	1401508	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	1401921	+	NM_001014990|MRPL22|29093|mitochondrial ribosomal protein L22##NM_014180|MRPL22|29093|mitochondrial ribosomal protein L22##AK000601|MRPL22|29093|mitochondrial ribosomal protein L22##AK302784|MRPL22|29093|mitochondrial ribosomal protein L22##CR933679|MRPL22|29093|mitochondrial ribosomal protein L22##BC012565|MRPL22|29093|mitochondrial ribosomal protein L22##AF161507|MRPL22|29093|mitochondrial ribosomal protein L22##AY063750|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK022748|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC113614|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC143724|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC036894|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC040931|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK074066|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK315101|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_001252156|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_015465|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK297381|CNOT8|9337|CCR4-NOT transcription complex, subunit 8##BC017366|CNOT8|9337|CCR4-NOT transcription complex, subunit 8##NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	0.992327	CTCF.p2:-17:0.992
chr5	139030083	139030187	reg1022061.p4	6.491	+	TSC_hg19_v1_chr5_+_139028524 AK001782	-1627	+	TSC_hg19_v1_chr5_+_139028290 AB097005 AB097032 NM_016463	-1968	+	BC024040 BC041013 TSC_hg19_v1_chr5_+_139027968 BC050046 BC017439	-2151	+	BC002490 TSC_hg19_v1_chr5_+_139060088 AB463548 GQ379202 AK314420	29949	+	AF151029 TSC_hg19_v1_chr5_+_139060229	30077	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	30257	+	AK001782|CXXC5|51523|CXXC finger protein 5##AB097005|CXXC5|51523|CXXC finger protein 5##AB097032|CXXC5|51523|CXXC finger protein 5##NM_016463|CXXC5|51523|CXXC finger protein 5##BC024040|CXXC5|51523|CXXC finger protein 5##BC041013|CXXC5|51523|CXXC finger protein 5##BC050046|CXXC5|51523|CXXC finger protein 5##BC017439|CXXC5|51523|CXXC finger protein 5##BC002490|CXXC5|51523|CXXC finger protein 5##GQ379202|CXXC5|51523|CXXC finger protein 5##AK314420|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5	0.0	
chr8	40809234	40809336	reg1022304.p1	6.491	+	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	-53948	-	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	-798267	+	AK128691 NM_194294	-1016812	+	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	357745	-	TSC_hg19_v1_chr8_+_41348077 NM_001174124 NM_016099	538788	+	TSC_hg19_v1_chr8_+_41348100 AK026613	538814	+	BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1##NM_001174124|GOLGA7|51125|golgin A7##NM_016099|GOLGA7|51125|golgin A7##AK026613|GOLGA7|51125|golgin A7	0.652675	CTCF.p2:7:0.493
chr11	89882164	89882268	reg1022731.p2	6.490	+	NM_005467 BC038840 AK075390 TSC_hg19_v1_chr11_+_89867862 BC027594 BC088727 AJ012370 BC067793 BC096316 BC096317 BC096318 BC099646 CU691606	-14345	+	NM_001143975	-63099	+	NM_001195234	-117943	+	CU687242 BC002339 BC072461 TSC_hg19_v1_chr11_-_89956218 AF192466 AK226099 AK225565 AK312663 AF123249 AK225365	73986	-	AK290231 NM_001144073 NM_012124	74315	-	TSC_hg19_v1_chr11_+_89984372 EU302123	102194	+	NM_005467|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC038840|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##AK075390|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC027594|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##AJ012370|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC067793|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC096316|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC096317|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC096318|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC099646|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##NM_001143975|UBTFL1|642623|upstream binding transcription factor, RNA polymerase I-like 1##NM_001195234|TRIM49L2|642612|tripartite motif containing 49-like 2##BC002339|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC072461|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF192466|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK226099|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225565|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK312663|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF123249|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225365|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1	0.802197	CTCF.p2:-8:0.802
chr7	73689742	73689859	reg1022425.p1	6.490	+	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	-21064	-	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	-21089	-	TSC_hg19_v1_chr7_+_73624361 AF252613	-65446	+	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	13987	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	178364	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	178508	+	NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AF252613|LAT2|7462|linker for activation of T cells family, member 2##AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1	0.41872	CTCF.p2:-3:0.419
chrX	46952777	46952908	reg1023423.p1	6.490	+	TSC_hg19_v1_chrX_+_46940238 AB028125 D31815	-12582	+	TSC_hg19_v1_chrX_+_46937889 BC073173 AB032064	-14912	+	TSC_hg19_v1_chrX_+_46937812 BC050371 BC058880 AK290136	-15005	+	TSC_hg19_v1_chrX_-_47004089 CR457239 BC107805 AK000501 AX810702	51235	-	TSC_hg19_v1_chrX_-_47004102 NM_001135998 NM_019056 AF044213	51268	-	BC010665 AF251063 TSC_hg19_v1_chrX_-_47004499 AY359056	51670	-	AB028125|RGN|9104|regucalcin (senescence marker protein-30)##D31815|RGN|9104|regucalcin (senescence marker protein-30)##BC073173|RGN|9104|regucalcin (senescence marker protein-30)##AB032064|RGN|9104|regucalcin (senescence marker protein-30)##BC050371|RGN|9104|regucalcin (senescence marker protein-30)##BC058880|RGN|9104|regucalcin (senescence marker protein-30)##AK290136|RGN|9104|regucalcin (senescence marker protein-30)##CR457239|NDUFB11|54539|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa##BC107805|NDUFB11|54539|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa##AK000501|NDUFB11|54539|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa##NM_001135998|NDUFB11|54539|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa##NM_019056|NDUFB11|54539|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa##AF044213|NDUFB11|54539|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa##BC010665|NDUFB11|54539|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa##AF251063|NDUFB11|54539|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa##AY359056|NDUFB11|54539|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa	0.958354	CTCF.p2:33:0.958
chr10	38770772	38770915	reg1025946.p1	6.489	+	TSC_hg19_v1_chr10_-_38691741 BC171738 BC042387 BC048143	-79087	-	AK295332 AY829267 AF165514 AF165517 BC071987 TSC_hg19_v1_chr10_+_38645320 AK293968 AK307174 CU687208	-125506	+	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	-387560	+	TSC_hg19_v1_chr10_-_42863441 AF519622 AK131313	4092620	-	AX721135 TSC_hg19_v1_chr10_-_43048257 AK308832 AK026980 BC045697 AX721116	4277359	-	TSC_hg19_v1_chr10_-_43134018 BC109232 BC160932 BC065181 BC107726 BC048313 AJ491697 NM_006955 AK096683 AK309564 AK304306 BC036398	4363155	-	BC171738|SEPT7L|285961|septin 7-like##BC042387|SEPT7L|285961|septin 7-like##BC048143|SEPT7L|285961|septin 7-like##AK295332|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AY829267|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165514|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165517|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC071987|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK293968|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK307174|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A##AF519622|LOC441666|441666|zinc finger protein 91 pseudogene##AK308832|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##AK026980|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC045697|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC109232|ZNF33B|7582|zinc finger protein 33B##BC160932|ZNF33B|7582|zinc finger protein 33B##BC065181|ZNF33B|7582|zinc finger protein 33B##BC107726|ZNF33B|7582|zinc finger protein 33B##BC048313|ZNF33B|7582|zinc finger protein 33B##AJ491697|ZNF33B|7582|zinc finger protein 33B##NM_006955|ZNF33B|7582|zinc finger protein 33B##AK096683|ZNF33B|7582|zinc finger protein 33B##AK309564|ZNF33B|7582|zinc finger protein 33B##AK304306|ZNF33B|7582|zinc finger protein 33B##BC036398|ZNF33B|7582|zinc finger protein 33B	0.973166	CTCF.p2:-32:0.973
chr22	33479368	33479507	reg1025040.p1	6.489	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-25082	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-76711	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-281685	+	AJ007583 AB011181 NM_004737 NM_133642	836933	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1982712	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	2174039	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.792279	CTCF.p2:-2:0.792
chr19	295271	295415	reg1021799.p1	6.488	+	BT007021 CU678210 AF035959 AF047760 AF056083 BC002806 TSC_hg19_v1_chr19_-_291402 NM_003712 NM_177526	-3959	-	NM_177543	-4175	-	AY972818 AY972819 BC136848 BC136867 BC136907 BC136908 NM_001005240	-184692	+	TSC_hg19_v1_chr19_-_344795 BC028203 NM_017550	49444	-	AB527590 CU688510 DQ890895 DQ894049 AF268610 BC028574 AB033129 NM_016585 NM_199202	80647	-	AB075837 NM_001136263 TSC_hg19_v1_chr19_-_409199	113841	-	BT007021|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF035959|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF047760|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF056083|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BC002806|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_003712|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_177526|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_177543|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AY972818|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AY972819|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136848|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136867|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136907|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136908|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##NM_001005240|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC028203|MIER2|54531|mesoderm induction early response 1, family member 2##NM_017550|MIER2|54531|mesoderm induction early response 1, family member 2##DQ890895|THEG|51298|Theg homolog (mouse)##DQ894049|THEG|51298|Theg homolog (mouse)##AF268610|THEG|51298|Theg homolog (mouse)##BC028574|THEG|51298|Theg homolog (mouse)##AB033129|THEG|51298|Theg homolog (mouse)##NM_016585|THEG|51298|Theg homolog (mouse)##NM_199202|THEG|51298|Theg homolog (mouse)##AB075837|C2CD4C|126567|C2 calcium-dependent domain containing 4C##NM_001136263|C2CD4C|126567|C2 calcium-dependent domain containing 4C	0.99951	CTCF.p2:-17:1.000
chr3	102460124	102460219	reg1021447.p1	6.488	+	AY090780 NM_175056 BC143817	-306304	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-891797	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-913211	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	2625409	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	2625651	+	CR749655 TSC_hg19_v1_chr3_-_105421064	2960883	-	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.957492	CTCF.p2:12:0.933
chr10	106034557	106034664	reg1022518.p1	6.487	+	TSC_hg19_v1_chr10_+_106028947 AY209189 AY350731 AK291886	-5669	+	BC056918 NM_001191013 NM_183239	-5980	+	NM_001191002 NM_004832 BX537431 TSC_hg19_v1_chr10_+_106014658 AK313680 BC000127 AF212303 U90313 AB590772	-20029	+	AK300508 AK296266 TSC_hg19_v1_chr10_+_106034669 CU691188 AY191318	52	+	BC046194 NM_001191014 NM_001191015 BC023583 AK297522	294	+	BC070108 NM_033397	59052	-	AY209189|GSTO2|119391|glutathione S-transferase omega 2##AY350731|GSTO2|119391|glutathione S-transferase omega 2##AK291886|GSTO2|119391|glutathione S-transferase omega 2##BC056918|GSTO2|119391|glutathione S-transferase omega 2##NM_001191013|GSTO2|119391|glutathione S-transferase omega 2##NM_183239|GSTO2|119391|glutathione S-transferase omega 2##NM_001191002|GSTO1|9446|glutathione S-transferase omega 1##NM_004832|GSTO1|9446|glutathione S-transferase omega 1##BX537431|GSTO1|9446|glutathione S-transferase omega 1##AK313680|GSTO1|9446|glutathione S-transferase omega 1##BC000127|GSTO1|9446|glutathione S-transferase omega 1##AF212303|GSTO1|9446|glutathione S-transferase omega 1##U90313|GSTO1|9446|glutathione S-transferase omega 1##AK300508|GSTO2|119391|glutathione S-transferase omega 2##AK296266|GSTO2|119391|glutathione S-transferase omega 2##AY191318|GSTO2|119391|glutathione S-transferase omega 2##BC046194|GSTO2|119391|glutathione S-transferase omega 2##NM_001191014|GSTO2|119391|glutathione S-transferase omega 2##NM_001191015|GSTO2|119391|glutathione S-transferase omega 2##BC023583|GSTO2|119391|glutathione S-transferase omega 2##AK297522|GSTO2|119391|glutathione S-transferase omega 2##BC070108|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##NM_033397|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein	0.0	
chr10	59339834	59339957	reg1024159.p1	6.487	+	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	-1218869	-	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	-1218881	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	-1981121	+	TSC_hg19_v1_chr10_-_60027655 BC016612 BC065709 NM_152230	687766	-	BC005962 TSC_hg19_v1_chr10_+_60028929 NM_018464 BC059168 AF220049 BC008474 BC007043 AY960578 AK312017	689051	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	754941	+	AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##BC016612|IPMK|253430|inositol polyphosphate multikinase##BC065709|IPMK|253430|inositol polyphosphate multikinase##NM_152230|IPMK|253430|inositol polyphosphate multikinase##BC005962|CISD1|55847|CDGSH iron sulfur domain 1##NM_018464|CISD1|55847|CDGSH iron sulfur domain 1##BC059168|CISD1|55847|CDGSH iron sulfur domain 1##AF220049|CISD1|55847|CDGSH iron sulfur domain 1##BC008474|CISD1|55847|CDGSH iron sulfur domain 1##BC007043|CISD1|55847|CDGSH iron sulfur domain 1##AY960578|CISD1|55847|CDGSH iron sulfur domain 1##AK312017|CISD1|55847|CDGSH iron sulfur domain 1##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	0.934118	CTCF.p2:-16:0.934
chr12	132093702	132093840	reg1024120.p1	6.487	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-655318	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-737060	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-737146	+	TSC_hg19_v1_chr12_+_132195623 BC142980	101842	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	101885	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	219195	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.537209	CTCF.p2:-12:0.537
chr12	98396835	98396940	reg1019191.p1	6.487	+	BC027605 NM_001135175	-1095644	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-1095856	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-1602570	-	TSC_hg19_v1_chr12_-_98897622 AK126817	500740	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	512480	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	512520	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.782953	CTCF.p2:-26:0.783
chr22	23144978	23145092	reg1022522.p1	6.487	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	-9929	+	TSC_hg19_v1_chr22_+_23063107 M18645 X53070 BC073786 X57805 X57813 AF026926 L35916 L35917 L35918 L35920 U43769 X64165 X64166 X54442	-81904	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	-90153	+	TSC_hg19_v1_chr22_+_23154240 L29158 L29159 L29160 L29161 L29164 BC032452 BC089414 AY190827 X57810 L26902	9240	+	X62125 TSC_hg19_v1_chr22_+_23165276 AK129603 BC071804 BC033102 CU689610 L03633 HM996064 HM996172 AF124174 AF194540 AF194541 AF194542 AF194543 AF194544 AF194545 AF194546 AF194547 AF194548 AF194549 AF194550 AF194551 AF194552 AF194553 AF194554 AF194555 AF194556 AF194557 AF194558 AF194559 AF194560 AF194561 AF194562 AF194563 AF194564 AF194565 AF194566 AF194567 AF194568 AF194569 AF194570 AF194571 AF194572 AF194573 AF194574 AF194575 AF194576 AF194577 AJ388658 AJ697911 AM181371 AM183998 AM184000 AM184018 AY685383 AY942038 DQ098709 DQ098711 DQ098766 DQ098772 DQ098775 DQ098778 DQ098782 DQ322816 DQ322984 DQ322992 EF589387 EF589498 EF589544 GU086862 L26532 Y09387 AM184068 DQ098712 DQ098779 AJ399866 AY050712 DQ322899 DQ322900 DQ322979 L21956 S67988 AY950800 U09888 U09892 Y08149 AF103683 AF044486 AY962389 AF092503 AJ408283 DQ098753 Z46858 DQ098738 DQ098739 DQ098762 L38428 DQ098710 AF103704 AF103701 AF103718 AF490954 AF490947 AF103709 AF103640 AF103644 AF103645 AF103647 AF103697 AF103698 AF103700 U87151	20360	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	68658	+	L35918|IGLJ3|28831|immunoglobulin lambda joining 3##BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3##BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3	0.894101	CTCF.p2:-10:0.894
chr2	71174112	71174209	reg1019883.p1	6.487	+	AK291121 NM_001692 BC063411 AK313194 AK301542 BC035978 M25809 AK223151 CU687698 CU690248	-11118	+	TSC_hg19_v1_chr2_+_71127738 BC006336 AB527952 BT007035	-46422	+	TSC_hg19_v1_chr2_+_71127724 NM_012476 Y17791	-46441	+	BC035234 NM_001115116 NM_024933	31414	+	BC010656 AK074840 TSC_hg19_v1_chr2_-_71219046	44871	-	AK315543 TSC_hg19_v1_chr2_-_71221930	47722	-	AK291121|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##NM_001692|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC063411|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK313194|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK301542|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC035978|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##M25809|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK223151|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC006336|VAX2|25806|ventral anterior homeobox 2##BT007035|VAX2|25806|ventral anterior homeobox 2##NM_012476|VAX2|25806|ventral anterior homeobox 2##Y17791|VAX2|25806|ventral anterior homeobox 2##BC035234|ANKRD53|79998|ankyrin repeat domain 53##NM_001115116|ANKRD53|79998|ankyrin repeat domain 53##NM_024933|ANKRD53|79998|ankyrin repeat domain 53##BC010656|TEX261|113419|testis expressed 261##AK074840|TEX261|113419|testis expressed 261##AK315543|TEX261|113419|testis expressed 261	0.865114	CTCF.p2:4:0.865
chrX	100542531	100542670	reg1021499.p1	6.487	+	NM_001171184 NM_001939 AB209305 BC036095 U43519 AK289825 AK295843 BC111695	-67587	+	TSC_hg19_v1_chrX_-_100446278 DQ145510	-96249	-	NM_006733 X97249	-187803	+	AF285595 NM_001168474	3723	-	BC043391 AK308261 NM_024885	5451	-	TSC_hg19_v1_chrX_-_100603719 U66035 BC070284 AK312117 BC005236 BC006994 BC015093 NM_001145951	61111	-	NM_001171184|DRP2|1821|dystrophin related protein 2##NM_001939|DRP2|1821|dystrophin related protein 2##AB209305|DRP2|1821|dystrophin related protein 2##BC036095|DRP2|1821|dystrophin related protein 2##U43519|DRP2|1821|dystrophin related protein 2##AK289825|DRP2|1821|dystrophin related protein 2##AK295843|DRP2|1821|dystrophin related protein 2##BC111695|DRP2|1821|dystrophin related protein 2##DQ145510|YWHAQP8|392510|YWHAQ pseudogene 8##NM_006733|CENPI|2491|centromere protein I##X97249|CENPI|2491|centromere protein I##AF285595|TAF7L|54457|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa##NM_001168474|TAF7L|54457|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa##BC043391|TAF7L|54457|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa##AK308261|TAF7L|54457|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa##NM_024885|TAF7L|54457|TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa##U66035|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)##BC070284|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)##AK312117|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)##BC005236|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)##BC006994|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)##BC015093|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)##NM_001145951|TIMM8A|1678|translocase of inner mitochondrial membrane 8 homolog A (yeast)	0.264647	CTCF.p2:-4:0.265
chr6	72794792	72794936	reg1019975.p2	6.486	+	TSC_hg19_v1_chr6_+_72596702 AY190519	-198152	+	BC151853 AB002338 BC152435 NM_014989 TSC_hg19_v1_chr6_+_72596658	-198211	+	AB045726 AB051866 TSC_hg19_v1_chr6_+_72596447	-198436	+	TSC_hg19_v1_chr6_+_72892371 AK295177	97548	+	AK294868 NM_001168407 NM_001168408 AK311105 AK295001	127690	+	AK309185 NM_001168409	131280	+	AY190519|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC151853|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB002338|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC152435|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_014989|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK295177|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK294868|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001168407|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001168408|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK311105|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK295001|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK309185|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001168409|RIMS1|22999|regulating synaptic membrane exocytosis 1	0.999825	CTCF.p2:-1:1.000
chr11	62500431	62500543	reg1021095.p2	6.485	+	TSC_hg19_v1_chr11_+_62495969 BC032123 NM_173810 AF451992 AF451993 BC053665	-4460	+	TSC_hg19_v1_chr11_-_62494930 BC029105	-5552	-	TSC_hg19_v1_chr11_-_62494900 DQ470474 AK122942 NM_001079559	-5640	-	DQ892842 EU176736 TSC_hg19_v1_chr11_-_62521626 BC025249 AK027045 NM_024784	21107	-	NM_002696 TSC_hg19_v1_chr11_+_62529028	28541	+	TSC_hg19_v1_chr11_+_62529051 AK312131 BC112162 BC112164 U20659 AB464043	28597	+	BC032123|TTC9C|283237|tetratricopeptide repeat domain 9C##NM_173810|TTC9C|283237|tetratricopeptide repeat domain 9C##AF451992|TTC9C|283237|tetratricopeptide repeat domain 9C##AF451993|TTC9C|283237|tetratricopeptide repeat domain 9C##BC053665|TTC9C|283237|tetratricopeptide repeat domain 9C##BC029105|HNRNPUL2|221092|heterogeneous nuclear ribonucleoprotein U-like 2##DQ470474|HNRNPUL2|221092|heterogeneous nuclear ribonucleoprotein U-like 2##AK122942|HNRNPUL2-BSCL2|100534595|HNRNPUL2-BSCL2 readthrough##NM_001079559|HNRNPUL2|221092|heterogeneous nuclear ribonucleoprotein U-like 2##DQ892842|ZBTB3|79842|zinc finger and BTB domain containing 3##EU176736|ZBTB3|79842|zinc finger and BTB domain containing 3##BC025249|ZBTB3|79842|zinc finger and BTB domain containing 3##AK027045|ZBTB3|79842|zinc finger and BTB domain containing 3##NM_024784|ZBTB3|79842|zinc finger and BTB domain containing 3##NM_002696|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##AK312131|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##BC112162|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##BC112164|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G##U20659|POLR2G|5436|polymerase (RNA) II (DNA directed) polypeptide G	0.051994	
chr1	38503464	38503600	reg1022476.p1	6.485	+	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-25102	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-25147	+	TSC_hg19_v1_chr1_-_38471187 BC014501 BC001351 BC011697 AK309179 AK290641 NM_001243878 NM_004468	-32299	-	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	8917	-	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	821854	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	835484	-	AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC014501|FHL3|2275|four and a half LIM domains 3##BC001351|FHL3|2275|four and a half LIM domains 3##BC011697|FHL3|2275|four and a half LIM domains 3##AK309179|FHL3|2275|four and a half LIM domains 3##AK290641|FHL3|2275|four and a half LIM domains 3##NM_001243878|FHL3|2275|four and a half LIM domains 3##NM_004468|FHL3|2275|four and a half LIM domains 3##L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein	0.949347	CTCF.p2:-10:0.949
chr6	167554322	167554479	reg1022236.p2	6.485	+	NM_031409 U68031 U68030	-18151	+	NM_004367	-29106	+	TSC_hg19_v1_chr6_+_167412884 NM_007045 NM_194429 Y18046 AK294950 AK289846 BX647686 AK312791 BC011902 AB590215 CU680104 DQ893037 DQ896278 AJ420472	-141547	+	BC095537 NM_005299	16916	-	NM_001145121	29680	+	AK091987 AX747293 NM_001143947 NM_018974 AJ422141 AJ508812 BC098248 BC099718 BC105635	150476	+	NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6##NM_007045|FGFR1OP|11116|FGFR1 oncogene partner##NM_194429|FGFR1OP|11116|FGFR1 oncogene partner##Y18046|FGFR1OP|11116|FGFR1 oncogene partner##AK294950|FGFR1OP|11116|FGFR1 oncogene partner##AK289846|FGFR1OP|11116|FGFR1 oncogene partner##AK312791|FGFR1OP|11116|FGFR1 oncogene partner##BC011902|FGFR1OP|11116|FGFR1 oncogene partner##DQ893037|FGFR1OP|11116|FGFR1 oncogene partner##DQ896278|FGFR1OP|11116|FGFR1 oncogene partner##AJ420472|FGFR1OP|11116|FGFR1 oncogene partner##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31##NM_001145121|TCP10L2|401285|t-complex 10-like 2 (mouse)##AK091987|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_001143947|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_018974|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ422141|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ508812|UNC93A|54346|unc-93 homolog A (C. elegans)##BC098248|UNC93A|54346|unc-93 homolog A (C. elegans)##BC099718|UNC93A|54346|unc-93 homolog A (C. elegans)##BC105635|UNC93A|54346|unc-93 homolog A (C. elegans)	0.0	
chr13	70884979	70885115	reg1019876.p2	6.484	+	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	-202506	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-3080543	-	AK289924 NM_022843	-8895393	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	1555212	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	1555716	-	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	1556387	-	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)	0.971813	CTCF.p2:3:0.972
chr22	32366163	32366305	reg1021872.p1	6.484	+	AJ704765 AJ704766 AL050256 NM_015372 AK315264	-24913	-	TSC_hg19_v1_chr22_+_32340608 AK312650 CR456612 AB385077 L20422 CU013208 CU013496	-25579	+	TSC_hg19_v1_chr22_+_32340520 NM_003405 X78138 BC003047 S80794	-25746	+	DQ656053 NM_000343 TSC_hg19_v1_chr22_+_32439037	72795	+	TSC_hg19_v1_chr22_+_32439103 AK312948	72879	+	TSC_hg19_v1_chr22_+_32439229 CR456579	72989	+	AJ704765|C22orf24|25775|chromosome 22 open reading frame 24##AJ704766|C22orf24|25775|chromosome 22 open reading frame 24##AL050256|C22orf24|25775|chromosome 22 open reading frame 24##NM_015372|C22orf24|25775|chromosome 22 open reading frame 24##AK315264|C22orf24|25775|chromosome 22 open reading frame 24##AK312650|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CR456612|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##L20422|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CU013208|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CU013496|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##NM_003405|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##X78138|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##BC003047|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##S80794|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##DQ656053|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##NM_000343|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##AK312948|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CR456579|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1	0.013027	
chr6	42198109	42198214	reg1019835.p1	6.484	+	TSC_hg19_v1_chr6_-_42185603 NM_018141	-12544	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-12561	-	TSC_hg19_v1_chr6_-_42185597 AK316599 BC012560	-12564	-	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	221662	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	333589	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	333616	+	NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##AK316599|MRPS10|55173|mitochondrial ribosomal protein S10##BC012560|MRPS10|55173|mitochondrial ribosomal protein S10##AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.818224	CTCF.p2:29:0.818
chrX	106141906	106142038	reg1021888.p2	6.484	+	TSC_hg19_v1_chrX_+_106045925 AK123957 NM_017752 NM_198881 BC122564 BX648230 AB449890 AB449891	-95991	+	TSC_hg19_v1_chrX_+_105969932 AK074264 NM_194463 BC063404 AF394689 CU687692	-171964	+	BC036901 NM_024539 AK126553	-204897	+	AF177340 NM_001171092	1421	+	BC007652 BC101998 BC105691 BC105692 BC110436 BC127250 NM_001171706 NM_138382	4581	-	AK312515 NM_001171095	19617	+	AK123957|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_017752|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_198881|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BC122564|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BX648230|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449890|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449891|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AK074264|RNF128|79589|ring finger protein 128##NM_194463|RNF128|79589|ring finger protein 128##BC063404|RNF128|79589|ring finger protein 128##AF394689|RNF128|79589|ring finger protein 128##BC036901|RNF128|79589|ring finger protein 128##NM_024539|RNF128|79589|ring finger protein 128##AK126553|RNF128|79589|ring finger protein 128##AF177340|CLDN2|9075|claudin 2##NM_001171092|CLDN2|9075|claudin 2##BC007652|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC101998|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC105691|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC105692|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC110436|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC127250|RIPPLY1|92129|ripply1 homolog (zebrafish)##NM_001171706|RIPPLY1|92129|ripply1 homolog (zebrafish)##NM_138382|RIPPLY1|92129|ripply1 homolog (zebrafish)##AK312515|CLDN2|9075|claudin 2##NM_001171095|CLDN2|9075|claudin 2	0.989861	CTCF.p2:-5:0.990
chr2	135415399	135415526	reg1022821.p2	6.483	+	NM_002410 D17716 AF113921	-403577	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-1089424	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-1236108	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	61094	-	AK125008 NM_138326 BC016018 BC107420 AB071418	180756	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	260935	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.900258	CTCF.p2:-39:0.900
chr19	47328782	47328895	reg1022245.p1	6.482	+	AF105230 TSC_hg19_v1_chr19_-_47291850 AB209738 AF105423 NM_005628 U53347 AK292690	-37116	-	AF334818 GQ919058 AB527629 CU674018 DQ892148 DQ895345 AF102826 TSC_hg19_v1_chr19_-_47291260 BC000062 AK125222	-37565	-	AK293433 AK301661 NM_001145144	-38296	-	BC006337 TSC_hg19_v1_chr19_-_47354069 AK312003 NM_004069 NM_021575	25293	-	AB051509 AF159851 BC131565 BC150257 NM_004491	93094	+	TSC_hg19_v1_chr19_+_47523068 BC039016	194238	+	AF105230|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AB209738|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF105423|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_005628|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##U53347|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK292690|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF334818|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##GQ919058|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ892148|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ895345|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF102826|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC000062|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK125222|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK293433|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK301661|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145144|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC006337|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##AK312003|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##NM_004069|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##NM_021575|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##AB051509|ARHGAP35|2909|Rho GTPase activating protein 35##AF159851|ARHGAP35|2909|Rho GTPase activating protein 35##BC131565|ARHGAP35|2909|Rho GTPase activating protein 35##BC150257|ARHGAP35|2909|Rho GTPase activating protein 35##NM_004491|ARHGAP35|2909|Rho GTPase activating protein 35##BC039016|NPAS1|4861|neuronal PAS domain protein 1	0.016739	
chr5	149778362	149778512	reg1024308.p1	6.482	+	TSC_hg19_v1_chr5_+_149737296 AY460334 BC027252	-41113	+	NM_000356 NM_001008657 NM_001135243 NM_001135244 NM_001135245 NM_001195141 U40847 TSC_hg19_v1_chr5_+_149737276 U76366 AK225284 AK296918 AK303611 AK307586 BC011764 BC014559 BC033093 BC016144	-41190	+	BC111002 AB448735 NM_001012301	-95952	-	TSC_hg19_v1_chr5_-_149792315 AB590276 BT019505 CU676294 DQ892005 DQ895194 AK292076 AK297889 AK300669 AK308929 M28588 X00497 BC018726 BC024272	13866	-	TSC_hg19_v1_chr5_-_149792349 M28589	13909	-	TSC_hg19_v1_chr5_-_149792474 NM_001025158 NM_001025159 NM_004355	14013	-	AY460334|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##BC027252|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##NM_000356|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##NM_001008657|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##NM_001135243|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##NM_001135244|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##NM_001135245|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##NM_001195141|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##U40847|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##U76366|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##AK225284|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##AK296918|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##AK303611|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##AK307586|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##BC011764|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##BC014559|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##BC033093|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##BC016144|TCOF1|6949|Treacher Collins-Franceschetti syndrome 1##BC111002|ARSI|340075|arylsulfatase family, member I##AB448735|ARSI|340075|arylsulfatase family, member I##NM_001012301|ARSI|340075|arylsulfatase family, member I##BT019505|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##DQ892005|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##DQ895194|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AK292076|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AK297889|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AK300669|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AK308929|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##M28588|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##X00497|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##BC018726|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##BC024272|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##NM_001025158|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##NM_001025159|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##NM_004355|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain	0.0	
chr1	27989437	27989617	reg1000372.p1	6.481	+	TSC_hg19_v1_chr1_-_27961656 BC064382 AK130188 NM_005248	-27841	-	M27454 AK301078 BC002836 AK304846 NM_001042729	-36452	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	-36857	-	TSC_hg19_v1_chr1_-_27998690 X02492 BC011601 BC015603	9150	-	TSC_hg19_v1_chr1_-_27998704 AK024814 AK314488	9182	-	TSC_hg19_v1_chr1_-_27998734 NM_002038 NM_022872 NM_022873	9212	-	BC064382|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK130188|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_005248|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##M27454|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK301078|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042729|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##X02492|IFI6|2537|interferon, alpha-inducible protein 6##BC011601|IFI6|2537|interferon, alpha-inducible protein 6##BC015603|IFI6|2537|interferon, alpha-inducible protein 6##AK024814|IFI6|2537|interferon, alpha-inducible protein 6##AK314488|IFI6|2537|interferon, alpha-inducible protein 6##NM_002038|IFI6|2537|interferon, alpha-inducible protein 6##NM_022872|IFI6|2537|interferon, alpha-inducible protein 6##NM_022873|IFI6|2537|interferon, alpha-inducible protein 6	0.02325	
chr3	158509212	158509349	reg1022299.p1	6.481	+	TSC_hg19_v1_chr3_-_158450277 NM_002888 NM_206963	-59000	-	U27185 AK130079 TSC_hg19_v1_chr3_-_158450247	-59039	-	DQ891333 DQ893367 DQ894516 DQ896684 BC029640 TSC_hg19_v1_chr3_-_158450211	-59072	-	AK297593 NM_001167903 NM_022736 TSC_hg19_v1_chr3_+_158519875 AK294628 AF351617 BC030542	10514	+	TSC_hg19_v1_chr3_+_158519882 AB014732 BC017661	10599	+	TSC_hg19_v1_chr3_+_158519899 AK297034 BC042197	10615	+	NM_002888|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##NM_206963|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##U27185|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##AK130079|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ891333|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ893367|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ894516|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ896684|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##BC029640|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##AK297593|MFSD1|64747|major facilitator superfamily domain containing 1##NM_001167903|MFSD1|64747|major facilitator superfamily domain containing 1##NM_022736|MFSD1|64747|major facilitator superfamily domain containing 1##AK294628|MFSD1|64747|major facilitator superfamily domain containing 1##AF351617|MFSD1|64747|major facilitator superfamily domain containing 1##BC030542|MFSD1|64747|major facilitator superfamily domain containing 1##AB014732|MFSD1|64747|major facilitator superfamily domain containing 1##BC017661|MFSD1|64747|major facilitator superfamily domain containing 1##AK297034|MFSD1|64747|major facilitator superfamily domain containing 1##BC042197|MFSD1|64747|major facilitator superfamily domain containing 1	0.868741	CTCF.p2:16:0.869
chr4	88770272	88770388	reg1021094.p2	6.481	+	AK307774 NM_001184695 NM_001184696 NM_001184697 NM_020203 AJ276396 BC128158 AF325916	-16201	+	AK075076 NM_001184694	-27775	+	NM_004967 TSC_hg19_v1_chr4_+_88720705 J05213	-49609	+	NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 TSC_hg19_v1_chr4_+_88896809 JF412667 BC093033	126480	+	TSC_hg19_v1_chr4_+_88896865 BX648003 J04765 AK057738 AK075463 AK290090 AK296035 BC007016 BC017387 BC022844 AK295491	126522	+	TSC_hg19_v1_chr4_+_88896868 AK290104 M83248 AK315461 AF052124	126549	+	AK307774|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184695|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184696|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184697|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_020203|MEPE|56955|matrix extracellular phosphoglycoprotein##AJ276396|MEPE|56955|matrix extracellular phosphoglycoprotein##BC128158|MEPE|56955|matrix extracellular phosphoglycoprotein##AF325916|MEPE|56955|matrix extracellular phosphoglycoprotein##AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_004967|IBSP|3381|integrin-binding sialoprotein##J05213|IBSP|3381|integrin-binding sialoprotein##NM_000582|SPP1|6696|secreted phosphoprotein 1##NM_001040058|SPP1|6696|secreted phosphoprotein 1##NM_001040060|SPP1|6696|secreted phosphoprotein 1##NM_001251829|SPP1|6696|secreted phosphoprotein 1##NM_001251830|SPP1|6696|secreted phosphoprotein 1##JF412667|SPP1|6696|secreted phosphoprotein 1##BC093033|SPP1|6696|secreted phosphoprotein 1##BX648003|SPP1|6696|secreted phosphoprotein 1##J04765|SPP1|6696|secreted phosphoprotein 1##AK057738|SPP1|6696|secreted phosphoprotein 1##AK075463|SPP1|6696|secreted phosphoprotein 1##AK290090|SPP1|6696|secreted phosphoprotein 1##AK296035|SPP1|6696|secreted phosphoprotein 1##BC007016|SPP1|6696|secreted phosphoprotein 1##BC017387|SPP1|6696|secreted phosphoprotein 1##BC022844|SPP1|6696|secreted phosphoprotein 1##AK295491|SPP1|6696|secreted phosphoprotein 1##AK290104|SPP1|6696|secreted phosphoprotein 1##M83248|SPP1|6696|secreted phosphoprotein 1##AK315461|SPP1|6696|secreted phosphoprotein 1##AF052124|SPP1|6696|secreted phosphoprotein 1	0.486988	CTCF.p2:6:0.487
chr4	10748913	10749094	reg1021001.p2	6.480	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-62602	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-289993	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-630467	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	681529	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2736948	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2736972	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr6_dbb_hap3	3023293	3023360	reg1019416.p1	6.480	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.994584	CTCF.p2:-9:0.995
chr1	111308686	111308772	reg1000514.p1	6.479	+	TSC_hg19_v1_chr1_-_111217626 BC035059 NM_002232	-91089	-	TSC_hg19_v1_chr1_-_111217553 AK314009	-91185	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	-91377	-	NM_001040033 BC035456	105100	+	NM_000560 TSC_hg19_v1_chr1_+_111415769 AK313582 AK298723	107026	+	BC040693 TSC_hg19_v1_chr1_+_111415791 M37033 M60871	107073	+	BC035059|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##NM_002232|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##NM_001040033|CD53|963|CD53 molecule##BC035456|CD53|963|CD53 molecule##NM_000560|CD53|963|CD53 molecule##AK313582|CD53|963|CD53 molecule##AK298723|CD53|963|CD53 molecule##BC040693|CD53|963|CD53 molecule##M37033|CD53|963|CD53 molecule##M60871|CD53|963|CD53 molecule	0.0	
chr22	44244720	44244836	reg1024869.p1	6.479	+	BC039315 TSC_hg19_v1_chr22_-_44208121 AK296679 AK292498 AK292411 AK058069 NM_022785 NM_198856	-36637	-	TSC_hg19_v1_chr22_+_43808109 AK289774	-436661	+	TSC_hg19_v1_chr22_+_43808019 AK290541 AK297276 AK299516 AK299531 NM_001044370	-436761	+	AK295399 AF115311 AL590119 AB587375 CR456588 CU013188 CU013476 DQ892373 DQ895583 CU688978 CU692628 BC022459 TSC_hg19_v1_chr22_-_44258315 AF176342 AF251263 AK313048 AK294622 AF188698 BC028171 NM_014351 BC030665	13525	-	BC104839 BC104843 BC143696 BC031820 AK056648 AK127172 NM_001177675 NM_138814	43071	-	AK025665 AL138578 NM_025225 TSC_hg19_v1_chr22_+_44319651 AK308995	74866	+	BC039315|EFCAB6|64800|EF-hand calcium binding domain 6##AK296679|EFCAB6|64800|EF-hand calcium binding domain 6##AK292498|EFCAB6|64800|EF-hand calcium binding domain 6##AK292411|EFCAB6|64800|EF-hand calcium binding domain 6##AK058069|EFCAB6|64800|EF-hand calcium binding domain 6##NM_022785|EFCAB6|64800|EF-hand calcium binding domain 6##NM_198856|EFCAB6|64800|EF-hand calcium binding domain 6##AK289774|MPPED1|758|metallophosphoesterase domain containing 1##AK290541|MPPED1|758|metallophosphoesterase domain containing 1##AK297276|MPPED1|758|metallophosphoesterase domain containing 1##AK299516|MPPED1|758|metallophosphoesterase domain containing 1##AK299531|MPPED1|758|metallophosphoesterase domain containing 1##NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1##AK295399|SULT4A1|25830|sulfotransferase family 4A, member 1##AF115311|SULT4A1|25830|sulfotransferase family 4A, member 1##AL590119|SULT4A1|25830|sulfotransferase family 4A, member 1##CR456588|SULT4A1|25830|sulfotransferase family 4A, member 1##CU013188|SULT4A1|25830|sulfotransferase family 4A, member 1##CU013476|SULT4A1|25830|sulfotransferase family 4A, member 1##DQ892373|SULT4A1|25830|sulfotransferase family 4A, member 1##DQ895583|SULT4A1|25830|sulfotransferase family 4A, member 1##BC022459|SULT4A1|25830|sulfotransferase family 4A, member 1##AF176342|SULT4A1|25830|sulfotransferase family 4A, member 1##AF251263|SULT4A1|25830|sulfotransferase family 4A, member 1##AK313048|SULT4A1|25830|sulfotransferase family 4A, member 1##AK294622|SULT4A1|25830|sulfotransferase family 4A, member 1##AF188698|SULT4A1|25830|sulfotransferase family 4A, member 1##BC028171|SULT4A1|25830|sulfotransferase family 4A, member 1##NM_014351|SULT4A1|25830|sulfotransferase family 4A, member 1##BC030665|SULT4A1|25830|sulfotransferase family 4A, member 1##BC104839|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC104843|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC143696|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC031820|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK056648|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK127172|PNPLA5|150379|patatin-like phospholipase domain containing 5##NM_001177675|PNPLA5|150379|patatin-like phospholipase domain containing 5##NM_138814|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK025665|PNPLA3|80339|patatin-like phospholipase domain containing 3##AL138578|PNPLA3|80339|patatin-like phospholipase domain containing 3##NM_025225|PNPLA3|80339|patatin-like phospholipase domain containing 3	0.991962	CTCF.p2:-4:0.992
chr5	102592033	102592131	reg1022234.p1	6.479	+	BC024591 NM_015216 AB463068	-126808	+	TSC_hg19_v1_chr5_+_102456089 AK294787	-136024	+	AK310544 AB007893 TSC_hg19_v1_chr5_+_102456004	-136101	+	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	2375	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	306399	-	AK308672 NM_001962 U26403	4414508	-	BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK294787|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AB007893|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5	0.330374	CTCF.p2:32:0.330
chr5	151098940	151099046	reg1021635.p1	6.479	+	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	-32485	-	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	-32532	-	AF231022 NM_001447	-150489	-	TSC_hg19_v1_chr5_-_151138170 AK091843 AX747215 NM_004045 AK293063 BC112248 BC112250	39222	-	TSC_hg19_v1_chr5_-_151150991 AB593120	51980	-	TSC_hg19_v1_chr5_+_151151479 BX648012 NM_005754 NM_198395	52479	+	AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##AK091843|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##NM_004045|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AK293063|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112248|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112250|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AB593120|LOC100652758|100652758|uncharacterized LOC100652758##BX648012|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_005754|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_198395|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1	0.989599	CTCF.p2:22:0.990
chr6	126354915	126355040	reg1022326.p2	6.479	+	TSC_hg19_v1_chr6_+_126307685 AK308651	-47314	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	-47375	+	TSC_hg19_v1_chr6_+_126277915 NM_138571 BX647228 AK309857 BC015732 AK057688 AJ420577 AY035387 AY035388 AY486460 AY486461 DQ892201 DQ895396	-76992	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	306293	+	TSC_hg19_v1_chr6_+_127439818 BC022367	1084834	+	NM_032784 AF251057	1085074	+	AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_138571|HINT3|135114|histidine triad nucleotide binding protein 3##BX647228|HINT3|135114|histidine triad nucleotide binding protein 3##AK309857|HINT3|135114|histidine triad nucleotide binding protein 3##BC015732|HINT3|135114|histidine triad nucleotide binding protein 3##AK057688|HINT3|135114|histidine triad nucleotide binding protein 3##AJ420577|HINT3|135114|histidine triad nucleotide binding protein 3##AY035387|HINT3|135114|histidine triad nucleotide binding protein 3##AY035388|HINT3|135114|histidine triad nucleotide binding protein 3##AY486460|HINT3|135114|histidine triad nucleotide binding protein 3##AY486461|HINT3|135114|histidine triad nucleotide binding protein 3##DQ892201|HINT3|135114|histidine triad nucleotide binding protein 3##DQ895396|HINT3|135114|histidine triad nucleotide binding protein 3##BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##BC022367|RSPO3|84870|R-spondin 3##NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3	0.992934	CTCF.p2:-12:0.993
chr7	115491449	115491595	reg1023593.p1	6.479	+	BC040713 TSC_hg19_v1_chr7_+_114562979 AY196485	-928566	+	TSC_hg19_v1_chr7_+_114562148 AF054589 NM_001166345 NM_001166346 NM_199072	-929348	+	AF467253 NM_001172767 NM_148899 U80741 AF467258 AF467259 TSC_hg19_v1_chr7_+_114066703	-1424892	+	AJ608795 NM_001244583	116844	-	TSC_hg19_v1_chr7_-_115670796 D43945 BC029891	179264	-	TSC_hg19_v1_chr7_-_115670820 AK313546	179296	-	BC040713|MDFIC|29969|MyoD family inhibitor domain containing##AY196485|MDFIC|29969|MyoD family inhibitor domain containing##AF054589|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166345|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166346|MDFIC|29969|MyoD family inhibitor domain containing##NM_199072|MDFIC|29969|MyoD family inhibitor domain containing##AF467253|FOXP2|93986|forkhead box P2##NM_001172767|FOXP2|93986|forkhead box P2##NM_148899|FOXP2|93986|forkhead box P2##AF467258|FOXP2|93986|forkhead box P2##AF467259|FOXP2|93986|forkhead box P2##AJ608795|TFEC|22797|transcription factor EC##NM_001244583|TFEC|22797|transcription factor EC##D43945|TFEC|22797|transcription factor EC##BC029891|TFEC|22797|transcription factor EC##AK313546|TFEC|22797|transcription factor EC	0.991722	CTCF.p2:28:0.992
chr5	43227961	43228129	reg1007022.p2	6.478	+	BC036422 NM_153361	-35719	+	AK057343 NM_003432 TSC_hg19_v1_chr5_+_43121669 AK310735 BC017923	-106361	+	TSC_hg19_v1_chr5_+_43121609 AK299315 AK307977	-106431	+	BC000297 BC082234 M15802 X66435 TSC_hg19_v1_chr5_-_43313515 AK095492 AK315593	85486	-	TSC_hg19_v1_chr5_-_43313581 NM_001098272 NM_002130	85551	-	TSC_hg19_v1_chr5_-_43397231 AK307307	169181	-	BC036422|NIM1|167359|serine/threonine-protein kinase NIM1##NM_153361|NIM1|167359|serine/threonine-protein kinase NIM1##AK057343|ZNF131|7690|zinc finger protein 131##NM_003432|ZNF131|7690|zinc finger protein 131##AK310735|ZNF131|7690|zinc finger protein 131##BC017923|ZNF131|7690|zinc finger protein 131##AK299315|ZNF131|7690|zinc finger protein 131##AK307977|ZNF131|7690|zinc finger protein 131##BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##M15802|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK307307|CCL28|56477|chemokine (C-C motif) ligand 28	0.0	
chr10	11454072	11454182	reg1022329.p2	6.477	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-246635	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-246681	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-246702	+	NM_001080491	120146	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	199509	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	330271	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.233842	CTCF.p2:-3:0.234
chr2	102870347	102870495	reg1024188.p1	6.477	+	AF284434 NM_003854 U49065 BC107064	-66973	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	-100001	+	TSC_hg19_v1_chr2_+_102759205 X16896	-111189	+	AB012701 NM_016232 AK313967 AK303389	57570	+	BC012580 BC030975 NM_003856 AK291578 AB029084	83310	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	108687	+	AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##X16896|IL1R1|3554|interleukin 1 receptor, type I##AB012701|IL1RL1|9173|interleukin 1 receptor-like 1##NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1##AK313967|IL18R1|8809|interleukin 18 receptor 1##AK303389|IL1RL1|9173|interleukin 1 receptor-like 1##BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1	0.89832	CTCF.p2:-15:0.898
chr2	74374991	74375145	reg1022263.p1	6.477	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	-50	-	NM_144993	-101619	+	TSC_hg19_v1_chr2_+_74154019 X97386	-221022	+	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	152	+	AL122062 TSC_hg19_v1_chr2_-_74382411	7313	-	AJ577474 CU678456 TSC_hg19_v1_chr2_-_74406014 AB016839 AK023321 AK001650 BC003398 NM_018221 AK021657	30839	-	BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##X97386|DGUOK|1716|deoxyguanosine kinase##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AJ577474|MOB1A|55233|MOB kinase activator 1A##AB016839|MOB1A|55233|MOB kinase activator 1A##AK023321|MOB1A|55233|MOB kinase activator 1A##AK001650|MOB1A|55233|MOB kinase activator 1A##BC003398|MOB1A|55233|MOB kinase activator 1A##NM_018221|MOB1A|55233|MOB kinase activator 1A##AK021657|MOB1A|55233|MOB kinase activator 1A	0.601899	CTCF.p2:28:0.467
chr4	8947422	8947526	reg1022188.p2	6.477	+	AB593128 M99587 NM_018942	-73977	-	U83411 TSC_hg19_v1_chr4_+_8594521	-352951	+	AK056317 NM_001014447 NM_001014448 NM_003652 BC080539 BC006393 BC018913 TSC_hg19_v1_chr4_+_8594489	-353035	+	NM_001040071	4002	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	269655	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	298129	+	M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##AK056317|CPZ|8532|carboxypeptidase Z##NM_001014447|CPZ|8532|carboxypeptidase Z##NM_001014448|CPZ|8532|carboxypeptidase Z##NM_003652|CPZ|8532|carboxypeptidase Z##BC080539|CPZ|8532|carboxypeptidase Z##BC006393|CPZ|8532|carboxypeptidase Z##BC018913|CPZ|8532|carboxypeptidase Z##NM_001040071|LOC650293|650293|seven transmembrane helix receptor##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	1.115574	CTCF.p2:11:0.375	CTCF.p2:-91:0.740
chr6	144537406	144537587	reg1017247.p1	6.477	+	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	-65775	+	NM_031287 TSC_hg19_v1_chr6_-_144416757	-120734	-	AB528231 AM393071 BC000198 TSC_hg19_v1_chr6_-_144416703 AK312079 AK074417	-120825	-	TSC_hg19_v1_chr6_+_144607461 AK292506	69984	+	NM_007124 X69086	75422	+	AK124757 TSC_hg19_v1_chr6_+_146056061	1518538	+	NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11##NM_031287|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AM393071|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##BC000198|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK312079|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK074417|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK292506|UTRN|7402|utrophin##NM_007124|UTRN|7402|utrophin##X69086|UTRN|7402|utrophin##AK124757|LOC100507557|100507557|uncharacterized LOC100507557	0.0	
chr7	149007438	149007542	reg1021584.p1	6.477	+	AK098351 AK310453 AK310396 TSC_hg19_v1_chr7_+_148982401 AK303492	-25104	+	TSC_hg19_v1_chr7_+_148959286 AK131504 NM_001195220 BC131569 AB528912	-48170	+	TSC_hg19_v1_chr7_+_148936741 AK074821 NM_012256 BC022785 EU446738 CU692712	-70696	+	TSC_hg19_v1_chr7_-_149157908 AB033111 NM_015694	150469	-	TSC_hg19_v1_chr7_-_149194795 BC068505 BC035586	187295	-	TSC_hg19_v1_chr7_-_149194830 AK291814	187350	-	AK098351|LOC155060|155060|AI894139 pseudogene##AK310453|LOC155060|155060|AI894139 pseudogene##AK310396|LOC155060|155060|AI894139 pseudogene##AK303492|LOC155060|155060|AI894139 pseudogene##NM_001195220|ZNF783|100289678|zinc finger family member 783##AK074821|ZNF212|7988|zinc finger protein 212##NM_012256|ZNF212|7988|zinc finger protein 212##BC022785|ZNF212|7988|zinc finger protein 212##EU446738|ZNF212|7988|zinc finger protein 212##AB033111|ZNF777|27153|zinc finger protein 777##NM_015694|ZNF777|27153|zinc finger protein 777##BC068505|ZNF746|155061|zinc finger protein 746##BC035586|ZNF746|155061|zinc finger protein 746##AK291814|ZNF746|155061|zinc finger protein 746	0.75612	CTCF.p2:0:0.756
chr10	3239684	3239797	reg1020786.p1	6.476	+	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-24735	-	CU678866 TSC_hg19_v1_chr10_-_3214975 AB384562 BC005025 AK225084 AK293788 AK315117 AK294865 AK299464 AK303406 BC095422 BX649017 AF061243	-24770	-	BC045577 TSC_hg19_v1_chr10_-_3214936	-24815	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	587571	-	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	587769	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1628678	+	BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC005025|PITRM1|10531|pitrilysin metallopeptidase 1##AK225084|PITRM1|10531|pitrilysin metallopeptidase 1##AK293788|PITRM1|10531|pitrilysin metallopeptidase 1##AK315117|PITRM1|10531|pitrilysin metallopeptidase 1##AK294865|PITRM1|10531|pitrilysin metallopeptidase 1##AK299464|PITRM1|10531|pitrilysin metallopeptidase 1##AK303406|PITRM1|10531|pitrilysin metallopeptidase 1##BC095422|PITRM1|10531|pitrilysin metallopeptidase 1##BX649017|PITRM1|10531|pitrilysin metallopeptidase 1##AF061243|PITRM1|10531|pitrilysin metallopeptidase 1##BC045577|PITRM1|10531|pitrilysin metallopeptidase 1##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2	1.009669	CTCF.p2:-12:0.991
chr10	71187014	71187129	reg1019685.p1	6.476	+	AK300649 BC033742 AK291996 NM_001057	-10451	-	TSC_hg19_v1_chr10_+_71078629 BC008730 DQ893281 DQ896762 CU679065 AB384968	-108406	+	AK309904 TSC_hg19_v1_chr10_+_71078627	-108444	+	TSC_hg19_v1_chr10_+_71211220 NM_012339 BC003157 BC004161 AF120266	24190	+	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	24262	+	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	146029	-	AK300649|TACR2|6865|tachykinin receptor 2##BC033742|TACR2|6865|tachykinin receptor 2##AK291996|TACR2|6865|tachykinin receptor 2##NM_001057|TACR2|6865|tachykinin receptor 2##BC008730|HK1|3098|hexokinase 1##DQ893281|HK1|3098|hexokinase 1##DQ896762|HK1|3098|hexokinase 1##AK309904|HK1|3098|hexokinase 1##NM_012339|TSPAN15|23555|tetraspanin 15##BC003157|TSPAN15|23555|tetraspanin 15##BC004161|TSPAN15|23555|tetraspanin 15##AF120266|TSPAN15|23555|tetraspanin 15##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3	0.958407	CTCF.p2:-17:0.958
chr19	47251893	47251990	reg1019827.p1	6.476	+	TSC_hg19_v1_chr19_-_47249708 NM_001039877 NM_013403	-2228	-	TSC_hg19_v1_chr19_-_47249688 AF212940 AB527410 BC034604	-2247	-	BC014278 AB209003 TSC_hg19_v1_chr19_-_47249674	-2286	-	TSC_hg19_v1_chr19_-_47288122 AK316546 AK299137 NM_001145145 AK055630	36159	-	AK293433 AK301661 NM_001145144	38601	-	AF334818 GQ919058 AB527629 CU674018 DQ892148 DQ895345 AF102826 TSC_hg19_v1_chr19_-_47291260 BC000062 AK125222	39332	-	NM_001039877|STRN4|29888|striatin, calmodulin binding protein 4##NM_013403|STRN4|29888|striatin, calmodulin binding protein 4##AF212940|STRN4|29888|striatin, calmodulin binding protein 4##BC034604|STRN4|29888|striatin, calmodulin binding protein 4##BC014278|STRN4|29888|striatin, calmodulin binding protein 4##AB209003|STRN4|29888|striatin, calmodulin binding protein 4##AK316546|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK299137|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145145|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK055630|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK293433|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK301661|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145144|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF334818|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##GQ919058|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ892148|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ895345|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF102826|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC000062|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK125222|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5	0.99406	CTCF.p2:12:0.994
chr3	155577802	155577921	reg1021076.p2	6.476	+	D88152 TSC_hg19_v1_chr3_-_155572196 BC014416 AK312268 NM_001190992 NM_004733	-5655	-	BC042198 AF115515 TSC_hg19_v1_chr3_-_155524068 BC064898 AK055701 NM_173657 AL832165 AK289890	-53800	-	BC113950 NM_014996	-155865	-	TSC_hg19_v1_chr3_+_155588290 NM_003875	10440	+	TSC_hg19_v1_chr3_+_155588438 AK302148 AK223399 AK300787	10573	+	TSC_hg19_v1_chr3_+_155588447 AK291504 BC012178	10594	+	D88152|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##BC014416|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##AK312268|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##NM_001190992|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##NM_004733|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##BC042198|C3orf33|285315|chromosome 3 open reading frame 33##AF115515|C3orf33|285315|chromosome 3 open reading frame 33##BC064898|C3orf33|285315|chromosome 3 open reading frame 33##AK055701|C3orf33|285315|chromosome 3 open reading frame 33##NM_173657|C3orf33|285315|chromosome 3 open reading frame 33##AL832165|C3orf33|285315|chromosome 3 open reading frame 33##AK289890|C3orf33|285315|chromosome 3 open reading frame 33##BC113950|PLCH1|23007|phospholipase C, eta 1##NM_014996|PLCH1|23007|phospholipase C, eta 1##NM_003875|GMPS|8833|guanine monphosphate synthetase##AK302148|GMPS|8833|guanine monphosphate synthetase##AK223399|GMPS|8833|guanine monphosphate synthetase##AK300787|GMPS|8833|guanine monphosphate synthetase##AK291504|GMPS|8833|guanine monphosphate synthetase##BC012178|GMPS|8833|guanine monphosphate synthetase	0.978395	CTCF.p2:4:0.978
chr4	148517601	148517712	reg1019220.p2	6.476	+	TSC_hg19_v1_chr4_+_148402244 AK312812 BC022511 AK304451 S45956	-115346	+	TSC_hg19_v1_chr4_+_148402117 D90348 S57498 X61950	-115533	+	NM_001166055 NM_001957 AK315931 TSC_hg19_v1_chr4_+_148402083	-115581	+	TSC_hg19_v1_chr4_+_148538547 BC046128 NM_018241	20877	+	TSC_hg19_v1_chr4_+_148538568 AK001708	20950	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	87608	-	AK312812|EDNRA|1909|endothelin receptor type A##BC022511|EDNRA|1909|endothelin receptor type A##AK304451|EDNRA|1909|endothelin receptor type A##S45956|EDNRA|1909|endothelin receptor type A##D90348|EDNRA|1909|endothelin receptor type A##S57498|EDNRA|1909|endothelin receptor type A##X61950|EDNRA|1909|endothelin receptor type A##NM_001166055|EDNRA|1909|endothelin receptor type A##NM_001957|EDNRA|1909|endothelin receptor type A##AK315931|EDNRA|1909|endothelin receptor type A##BC046128|TMEM184C|55751|transmembrane protein 184C##NM_018241|TMEM184C|55751|transmembrane protein 184C##AK001708|TMEM184C|55751|transmembrane protein 184C##BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)	0.593941	CTCF.p2:17:0.594
chr11	68611490	68611604	reg1021789.p1	6.475	+	TSC_hg19_v1_chr11_-_68609385 AK172798 NM_001031847 NM_001876	-2167	-	TSC_hg19_v1_chr11_-_68609329 AK314301	-2211	-	BC000185 L39211 TSC_hg19_v1_chr11_-_68609308	-2257	-	TSC_hg19_v1_chr11_-_68671301 BC055088 CU691112 AK301989 AK096756 NM_181514 NM_181515	59738	-	TSC_hg19_v1_chr11_+_68671318 NM_002180	59762	+	TSC_hg19_v1_chr11_+_68671350 BC041808	59788	+	AK172798|CPT1A|1374|carnitine palmitoyltransferase 1A (liver)##NM_001031847|CPT1A|1374|carnitine palmitoyltransferase 1A (liver)##NM_001876|CPT1A|1374|carnitine palmitoyltransferase 1A (liver)##AK314301|CPT1A|1374|carnitine palmitoyltransferase 1A (liver)##BC000185|CPT1A|1374|carnitine palmitoyltransferase 1A (liver)##L39211|CPT1A|1374|carnitine palmitoyltransferase 1A (liver)##BC055088|MRPL21|219927|mitochondrial ribosomal protein L21##AK301989|MRPL21|219927|mitochondrial ribosomal protein L21##AK096756|MRPL21|219927|mitochondrial ribosomal protein L21##NM_181514|MRPL21|219927|mitochondrial ribosomal protein L21##NM_181515|MRPL21|219927|mitochondrial ribosomal protein L21##NM_002180|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC041808|IGHMBP2|3508|immunoglobulin mu binding protein 2	0.971635	CTCF.p2:2:0.972
chr12	46525665	46525800	reg1025810.p1	6.475	+	TSC_hg19_v1_chr12_-_46385857 AK026473	-139857	-	TSC_hg19_v1_chr12_-_46384378 NM_004719	-141307	-	AK096682 TSC_hg19_v1_chr12_-_46384348 AF030234	-141385	-	AK074851 CU679761 DQ891017 EU176550 AK074949 AK313731 TSC_hg19_v1_chr12_-_46633674	107881	-	TSC_hg19_v1_chr12_-_46662567 AF247166	136834	-	TSC_hg19_v1_chr12_-_46662776 BC010620 BX648676	137011	-	AK026473|SCAF11|9169|SR-related CTD-associated factor 11##NM_004719|SCAF11|9169|SR-related CTD-associated factor 11##AK096682|SCAF11|9169|SR-related CTD-associated factor 11##AF030234|SCAF11|9169|SR-related CTD-associated factor 11##AK074851|SLC38A1|81539|solute carrier family 38, member 1##DQ891017|SLC38A1|81539|solute carrier family 38, member 1##EU176550|SLC38A1|81539|solute carrier family 38, member 1##AK074949|SLC38A1|81539|solute carrier family 38, member 1##AK313731|SLC38A1|81539|solute carrier family 38, member 1##AF247166|SLC38A1|81539|solute carrier family 38, member 1##BC010620|SLC38A1|81539|solute carrier family 38, member 1##BX648676|SLC38A1|81539|solute carrier family 38, member 1	0.183196	
chr5	151729354	151729460	reg1022001.p1	6.475	+	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	-425045	-	TSC_hg19_v1_chr5_+_151151662 X78262	-577743	+	TSC_hg19_v1_chr5_+_151151516 U32519 BC108278	-577878	+	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	55344	-	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	1140858	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	1689050	-	AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##X78262|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##U32519|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##BC108278|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2	0.629527	CTCF.p2:11:0.630
chr20	61641711	61641891	reg1000073.p4	6.474	+	BC137288 BC137308 NM_080606	-3415	-	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-57676	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-57771	+	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	205722	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	225540	+	TSC_hg19_v1_chr20_-_61884664 AK308958	242932	-	BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7##AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4	0.037049	
chr6	126295521	126295634	reg1021953.p1	6.474	+	TSC_hg19_v1_chr6_+_126277915 NM_138571 BX647228 AK309857 BC015732 AK057688 AJ420577 AY035387 AY035388 AY486460 AY486461 DQ892201 DQ895396	-17592	+	NM_001199622 TSC_hg19_v1_chr6_+_126240392 AK094706	-55154	+	TSC_hg19_v1_chr6_+_126112105 BC036461 AK127512 AB074157 AK294558 BX537385 AL832621 AL832628 AB074156	-183469	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	12025	+	TSC_hg19_v1_chr6_+_126307685 AK308651	12086	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	365693	+	NM_138571|HINT3|135114|histidine triad nucleotide binding protein 3##BX647228|HINT3|135114|histidine triad nucleotide binding protein 3##AK309857|HINT3|135114|histidine triad nucleotide binding protein 3##BC015732|HINT3|135114|histidine triad nucleotide binding protein 3##AK057688|HINT3|135114|histidine triad nucleotide binding protein 3##AJ420577|HINT3|135114|histidine triad nucleotide binding protein 3##AY035387|HINT3|135114|histidine triad nucleotide binding protein 3##AY035388|HINT3|135114|histidine triad nucleotide binding protein 3##AY486460|HINT3|135114|histidine triad nucleotide binding protein 3##AY486461|HINT3|135114|histidine triad nucleotide binding protein 3##DQ892201|HINT3|135114|histidine triad nucleotide binding protein 3##DQ895396|HINT3|135114|histidine triad nucleotide binding protein 3##NM_001199622|NCOA7|135112|nuclear receptor coactivator 7##AK094706|NCOA7|135112|nuclear receptor coactivator 7##BC036461|NCOA7|135112|nuclear receptor coactivator 7##AK127512|NCOA7|135112|nuclear receptor coactivator 7##AB074157|NCOA7|135112|nuclear receptor coactivator 7##AK294558|NCOA7|135112|nuclear receptor coactivator 7##BX537385|NCOA7|135112|nuclear receptor coactivator 7##AL832621|NCOA7|135112|nuclear receptor coactivator 7##AL832628|NCOA7|135112|nuclear receptor coactivator 7##AB074156|NCOA7|135112|nuclear receptor coactivator 7##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W	0.997021	CTCF.p2:8:0.997
chr6	126978810	126978951	reg1023865.p1	6.474	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	-317610	+	TSC_hg19_v1_chr6_+_126307685 AK308651	-671217	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	-671278	+	TSC_hg19_v1_chr6_+_127439818 BC022367	460931	+	NM_032784 AF251057	461171	+	NM_001242851 NM_001242844 NM_001242849 NM_001242852 TSC_hg19_v1_chr6_+_127587982 NM_001242845 NM_001242846 NM_001242850 NM_030963	609024	+	BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC022367|RSPO3|84870|R-spondin 3##NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3##NM_001242851|RNF146|81847|ring finger protein 146##NM_001242844|RNF146|81847|ring finger protein 146##NM_001242849|RNF146|81847|ring finger protein 146##NM_001242852|RNF146|81847|ring finger protein 146##NM_001242845|RNF146|81847|ring finger protein 146##NM_001242846|RNF146|81847|ring finger protein 146##NM_001242850|RNF146|81847|ring finger protein 146##NM_030963|RNF146|81847|ring finger protein 146	0.477475	CTCF.p2:19:0.477
chr7	142397385	142397546	reg1021612.p1	6.474	+	NM_001190487	-23335	+	AY358487 BC035384 AK122940 NM_001001317	-439604	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-585926	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	59861	+	M12426 TSC_hg19_v1_chr7_+_142495248	97730	+	TSC_hg19_v1_chr7_+_142552837 NM_004445 D83492 BC015495 BC051028 BC056159	155260	+	NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)##NM_004445|EPHB6|2051|EPH receptor B6##D83492|EPHB6|2051|EPH receptor B6##BC015495|EPHB6|2051|EPH receptor B6##BC051028|EPHB6|2051|EPH receptor B6##BC056159|EPHB6|2051|EPH receptor B6	0.540791	CTCF.p2:-16:0.541
chr3	17193409	17193589	reg1006029.p2	6.473	+	BC036392 NM_015184	-218918	+	AB029015 NM_001144382	-267048	+	U65918 U66726 U66078 BC027595 NM_001351	-546533	-	AK310539 NM_001134381	548012	-	D86965 NM_014744	588899	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	590668	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.150775	
chr9	103462989	103463114	reg1020484.p1	6.473	+	NM_001018116 AK300099 TSC_hg19_v1_chr9_+_103340380 EU487253 BC090888	-122662	+	TSC_hg19_v1_chr9_+_103235637 BC035056 DQ891732 DQ894909	-227322	+	TSC_hg19_v1_chr9_+_103235495 NM_003692	-227547	+	NM_207299 AK303807 TSC_hg19_v1_chr9_+_103791087	328015	+	AK000307 AK225306 BC029380 NM_017753 TSC_hg19_v1_chr9_+_103947336	484275	+	NM_001127610 AK315347	682771	-	NM_001018116|MURC|347273|muscle-related coiled-coil protein##AK300099|MURC|347273|muscle-related coiled-coil protein##EU487253|MURC|347273|muscle-related coiled-coil protein##BC090888|MURC|347273|muscle-related coiled-coil protein##BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_207299|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK303807|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_001127610|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##AK315347|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)	0.987687	CTCF.p2:-2:0.988
chr9	34332500	34332609	reg1021002.p1	6.473	+	NM_001161 NM_001244390 NM_147172 NM_147173 TSC_hg19_v1_chr9_+_34329566 AK310574 U30313	-3016	+	TSC_hg19_v1_chr9_-_34329214 NM_194313 AK310014	-3343	-	TSC_hg19_v1_chr9_+_34179058 AF222043 BC098141 BC098316 BC099726 BC100668	-153472	+	TSC_hg19_v1_chr9_-_34376864 BC070098 NM_020702	44379	-	AK225981 AF367474 TSC_hg19_v1_chr9_-_34381563 AK094751 NM_001252195 NM_147168 NM_147169	48993	-	AK058087 BC022084 BC029484 NM_032596	65263	-	NM_001161|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_001244390|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_147172|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_147173|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##U30313|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_194313|KIF24|347240|kinesin family member 24##AK310014|KIF24|347240|kinesin family member 24##AF222043|UBAP1|51271|ubiquitin associated protein 1##BC098141|UBAP1|51271|ubiquitin associated protein 1##BC098316|UBAP1|51271|ubiquitin associated protein 1##BC099726|UBAP1|51271|ubiquitin associated protein 1##BC100668|UBAP1|51271|ubiquitin associated protein 1##BC070098|KIAA1161|57462|KIAA1161##NM_020702|KIAA1161|57462|KIAA1161##AK225981|C9orf24|84688|chromosome 9 open reading frame 24##AF367474|C9orf24|84688|chromosome 9 open reading frame 24##AK094751|C9orf24|84688|chromosome 9 open reading frame 24##NM_001252195|C9orf24|84688|chromosome 9 open reading frame 24##NM_147168|C9orf24|84688|chromosome 9 open reading frame 24##NM_147169|C9orf24|84688|chromosome 9 open reading frame 24##AK058087|C9orf24|84688|chromosome 9 open reading frame 24##BC022084|C9orf24|84688|chromosome 9 open reading frame 24##BC029484|C9orf24|84688|chromosome 9 open reading frame 24##NM_032596|C9orf24|84688|chromosome 9 open reading frame 24	0.996867	CTCF.p2:2:0.997
chr11	8240959	8241087	reg1021621.p1	6.472	+	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	-50460	-	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-138224	+	NM_003320 U82467	-180844	+	BC069752 BC069793 M26682 NM_002315	44329	-	AK093251 AX748014 BC031231 NM_030906	374434	-	AK293193 TSC_hg19_v1_chr11_-_8615705	374680	-	AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##NM_003320|TUB|7275|tubby homolog (mouse)##U82467|TUB|7275|tubby homolog (mouse)##BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33##AK293193|STK33|65975|serine/threonine kinase 33	0.923377	CTCF.p2:-12:0.923
chr5	84345074	84345211	reg1021432.p2	6.472	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-664478	-	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	-664896	-	AK313713 NM_001884 X17405 X78076 X78075	-1328208	-	TSC_hg19_v1_chr5_+_85913757 AK026505	1568616	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	1568675	+	TSC_hg19_v1_chr5_+_86563706 CR749722	2218543	+	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.478429	CTCF.p2:14:0.478
chr16	48576216	48576309	reg1020297.p1	6.471	+	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	-157010	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	-176471	-	BC042550 TSC_hg19_v1_chr16_-_48399765	-176502	-	BC051897 TSC_hg19_v1_chr16_-_48644092 AB014515 BC152472 NM_153029	67854	-	AB527638 TSC_hg19_v1_chr16_-_49315397	739131	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	739238	-	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC042550|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC051897|N4BP1|9683|NEDD4 binding protein 1##AB014515|N4BP1|9683|NEDD4 binding protein 1##BC152472|N4BP1|9683|NEDD4 binding protein 1##NM_153029|N4BP1|9683|NEDD4 binding protein 1##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor	0.986563	CTCF.p2:-15:0.987
chr2	241519234	241519388	reg1022067.p1	6.471	+	BC082975 TSC_hg19_v1_chr2_+_241508114	-11203	+	TSC_hg19_v1_chr2_+_241507945 NM_018226	-11346	+	TSC_hg19_v1_chr2_-_241500482 AK056511 AK296714	-18817	-	TSC_hg19_v1_chr2_+_241526150 NM_023083 NM_023085 AK300279 AF089088 AK074807 BC004260 BC007553 AF089095 AB058748 AF089090 AF089091 AF089092 AF089093 AF089094 AF089096 AB590370 DQ893519 DQ896503	6918	+	TSC_hg19_v1_chr2_+_241544846 NM_001195381 NM_001195382 AK172786 AK290256	25529	+	AK314002 NM_005301	45350	+	BC082975|RNPEPL1|57140|arginyl aminopeptidase (aminopeptidase B)-like 1##NM_018226|RNPEPL1|57140|arginyl aminopeptidase (aminopeptidase B)-like 1##AK056511|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK296714|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_023083|CAPN10|11132|calpain 10##NM_023085|CAPN10|11132|calpain 10##AK300279|CAPN10|11132|calpain 10##AF089088|CAPN10|11132|calpain 10##AK074807|CAPN10|11132|calpain 10##BC004260|CAPN10|11132|calpain 10##BC007553|CAPN10|11132|calpain 10##AB058748|CAPN10|11132|calpain 10##AF089090|CAPN10|11132|calpain 10##AF089091|CAPN10|11132|calpain 10##AF089092|CAPN10|11132|calpain 10##AF089093|CAPN10|11132|calpain 10##AF089094|CAPN10|11132|calpain 10##AF089096|CAPN10|11132|calpain 10##DQ893519|CAPN10|11132|calpain 10##DQ896503|CAPN10|11132|calpain 10##NM_001195381|GPR35|2859|G protein-coupled receptor 35##NM_001195382|GPR35|2859|G protein-coupled receptor 35##AK172786|GPR35|2859|G protein-coupled receptor 35##AK290256|GPR35|2859|G protein-coupled receptor 35##AK314002|GPR35|2859|G protein-coupled receptor 35##NM_005301|GPR35|2859|G protein-coupled receptor 35	0.0	
chr4	45444619	45444741	reg1022551.p2	6.471	+	TSC_hg19_v1_chr4_-_44728574 AK296051 AB209904 AK055639 AY173948 AK129655 AK308920 AF247786 NM_138335	-716116	-	TSC_hg19_v1_chr4_+_44680469 NM_021927 BX647242 BC036768 BC012338 AK225314 AK023282 AK308667	-764220	+	AK096895 BC103995 BC103996 NM_182592	-791023	-	CU689108 DQ890976 DQ894150 CR933628 BC031087 AK289806 AK299884 BX648937 NM_173536 AK122845	681333	-	TSC_hg19_v1_chr4_-_46391400 AK125179 NM_001114175	946719	-	TSC_hg19_v1_chr4_-_46391484 AK307128	946833	-	AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_021927|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BX647242|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC036768|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC012338|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK225314|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK023282|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK308667|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7##DQ890976|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##DQ894150|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##CR933628|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BC031087|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK289806|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK299884|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BX648937|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##NM_173536|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK122845|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK125179|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_001114175|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK307128|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2	0.96	CTCF.p2:6:0.960
chr10	88726431	88726547	reg1022845.p2	6.470	+	NM_003087 AK223367 AK311652 BC014098 AK312141 AF017256 AF411524 EU019993 AF010126 DQ892334 DQ892505 DQ895719 EU176715 AB464279 CR541788 CR541790	-8119	+	TSC_hg19_v1_chr10_-_88717330 BC072456 AK304727 AK023527 AK293822 BC094744 BC064415 AK308401 NM_024756	-9118	-	TSC_hg19_v1_chr10_+_88516526 NM_004329 BC028383 AK291764 Z22535	-210002	+	NM_006829 TSC_hg19_v1_chr10_+_88728238 AK304688 AK312031 BC004471 D45370	1739	+	AK097165 NM_133447	4008	+	TSC_hg19_v1_chr10_-_88730968 AK128041	4508	-	NM_003087|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK223367|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##BC014098|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK312141|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF017256|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF411524|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU019993|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF010126|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892334|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892505|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ895719|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU176715|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541788|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541790|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##BC072456|MMRN2|79812|multimerin 2##AK304727|MMRN2|79812|multimerin 2##AK023527|MMRN2|79812|multimerin 2##AK293822|MMRN2|79812|multimerin 2##BC094744|MMRN2|79812|multimerin 2##BC064415|MMRN2|79812|multimerin 2##AK308401|MMRN2|79812|multimerin 2##NM_024756|MMRN2|79812|multimerin 2##NM_004329|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC028383|BMPR1A|657|bone morphogenetic protein receptor, type IA##AK291764|BMPR1A|657|bone morphogenetic protein receptor, type IA##Z22535|BMPR1A|657|bone morphogenetic protein receptor, type IA##NM_006829|C10orf116|10974|chromosome 10 open reading frame 116##AK312031|C10orf116|10974|chromosome 10 open reading frame 116##BC004471|C10orf116|10974|chromosome 10 open reading frame 116##D45370|C10orf116|10974|chromosome 10 open reading frame 116##AK097165|AGAP11|119385|ankyrin repeat and GTPase domain Arf GTPase activating protein 11##NM_133447|AGAP11|119385|ankyrin repeat and GTPase domain Arf GTPase activating protein 11##AK128041|LOC100133190|100133190|uncharacterized LOC100133190	0.969406	CTCF.p2:7:0.969
chr14	31919342	31919465	reg1019135.p1	6.470	+	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	-29642	-	TSC_hg19_v1_chr14_-_31676920 BC016947	-242468	-	TSC_hg19_v1_chr14_-_31676690 NM_015382	-242718	-	TSC_hg19_v1_chr14_-_31926633 BC010618 AK302829 AK055367 NM_080664	7272	-	GQ981321 GQ981322 NM_001197184	37747	-	TSC_hg19_v1_chr14_+_32030642 NM_025152 AK316445 BX248028 AK295326 BC024919 AK022722 CU692938	111254	+	BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A##NM_015382|HECTD1|25831|HECT domain containing 1##BC010618|C14orf126|112487|chromosome 14 open reading frame 126##AK055367|C14orf126|112487|chromosome 14 open reading frame 126##NM_080664|C14orf126|112487|chromosome 14 open reading frame 126##GQ981321|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##GQ981322|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##NM_001197184|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##NM_025152|NUBPL|80224|nucleotide binding protein-like##AK316445|NUBPL|80224|nucleotide binding protein-like##BX248028|NUBPL|80224|nucleotide binding protein-like##AK295326|NUBPL|80224|nucleotide binding protein-like##BC024919|NUBPL|80224|nucleotide binding protein-like##AK022722|NUBPL|80224|nucleotide binding protein-like	0.994038	CTCF.p2:1:0.994
chr17	7463812	7463938	reg1010837.p1	6.470	+	AK225556 AK314518 AK301221 AF046888 AF114011 AY081050 AF114013 AF114012 AF184972 AY358880 BC008042 TSC_hg19_v1_chr17_+_7462318 DQ149579 EF211088 EU831984 EU832077 AF136294 BT019561 BT019562 CR542040 CR542073	-1665	+	TSC_hg19_v1_chr17_+_7461620 NM_001198622 NM_001198623 NM_001198624 NM_003808 NM_172087 NM_172088	-2259	+	BC019047 NM_003809 NM_172089 BC071837 AF055872 AY358870 AY081051 BC104420 AF030099	-11462	+	TSC_hg19_v1_chr17_+_7465295 NM_015670	1421	+	TSC_hg19_v1_chr17_+_7465319 BC080658 AL834294 AF199459 AY008763	1554	+	NM_001204510 NM_001416 TSC_hg19_v1_chr17_+_7476143 AK130082 AK291971 AK296664 AK303599 AK312630 D13748 AK289453 AK297916 AK303222 AK309274 BC009585 BC006210 BC073752 AB385527 CU679411 DQ893044 DQ896288 BT019880 BT019881 BC032078	12217	+	AK225556|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK314518|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK301221|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF046888|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114011|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AY081050|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114013|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114012|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF184972|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AY358880|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BC008042|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##DQ149579|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EF211088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EU831984|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EU832077|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF136294|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BT019561|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BT019562|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##CR542040|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##CR542073|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198622|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198623|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198624|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_003808|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_172087|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_172088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BC019047|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_003809|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_172089|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough##BC071837|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AF055872|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AY358870|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AY081051|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough##BC104420|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AF030099|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_015670|SENP3|26168|SUMO1/sentrin/SMT3 specific peptidase 3##BC080658|SENP3|26168|SUMO1/sentrin/SMT3 specific peptidase 3##AL834294|SENP3|26168|SUMO1/sentrin/SMT3 specific peptidase 3##AF199459|SENP3|26168|SUMO1/sentrin/SMT3 specific peptidase 3##AY008763|SENP3|26168|SUMO1/sentrin/SMT3 specific peptidase 3##NM_001204510|EIF4A1|1973|eukaryotic translation initiation factor 4A1##NM_001416|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK130082|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK291971|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK296664|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK303599|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK312630|EIF4A1|1973|eukaryotic translation initiation factor 4A1##D13748|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK289453|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK297916|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK303222|EIF4A1|1973|eukaryotic translation initiation factor 4A1##AK309274|EIF4A1|1973|eukaryotic translation initiation factor 4A1##BC009585|EIF4A1|1973|eukaryotic translation initiation factor 4A1##BC006210|EIF4A1|1973|eukaryotic translation initiation factor 4A1##BC073752|EIF4A1|1973|eukaryotic translation initiation factor 4A1##DQ893044|EIF4A1|1973|eukaryotic translation initiation factor 4A1##DQ896288|EIF4A1|1973|eukaryotic translation initiation factor 4A1##BT019880|EIF4A1|1973|eukaryotic translation initiation factor 4A1##BT019881|EIF4A1|1973|eukaryotic translation initiation factor 4A1##BC032078|EIF4A1|1973|eukaryotic translation initiation factor 4A1	0.0	
chr3	58810070	58810209	reg1024760.p1	6.470	+	BC015359 TSC_hg19_v1_chr3_-_58652501 AK127546 NM_138805 AY358677	-157618	-	AF035283 NM_001076778 NM_007177	-246649	-	AB023811 TSC_hg19_v1_chr3_-_58563116 BC010561 AL050264 AK055443 AK128791 BC093012	-247030	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	225569	-	BC075863 TSC_hg19_v1_chr3_-_59035746	225602	-	BC050317 TSC_hg19_v1_chr3_-_59035759	225621	-	BC015359|FAM3D|131177|family with sequence similarity 3, member D##AK127546|FAM3D|131177|family with sequence similarity 3, member D##NM_138805|FAM3D|131177|family with sequence similarity 3, member D##AY358677|FAM3D|131177|family with sequence similarity 3, member D##AF035283|FAM107A|11170|family with sequence similarity 107, member A##NM_001076778|FAM107A|11170|family with sequence similarity 107, member A##NM_007177|FAM107A|11170|family with sequence similarity 107, member A##AB023811|FAM107A|11170|family with sequence similarity 107, member A##BC010561|FAM107A|11170|family with sequence similarity 107, member A##AL050264|FAM107A|11170|family with sequence similarity 107, member A##AK055443|FAM107A|11170|family with sequence similarity 107, member A##AK128791|FAM107A|11170|family with sequence similarity 107, member A##BC093012|FAM107A|11170|family with sequence similarity 107, member A##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##BC050317|C3orf67|200844|chromosome 3 open reading frame 67	0.027588	
chr9	116639123	116639292	reg1021802.p1	6.470	+	TSC_hg19_v1_chr9_+_116638585 BC036039 NM_133374 BC136287 BC143826 AK126896 BC053892	-608	+	TSC_hg19_v1_chr9_+_116356408 BC018072 BC019039 CU676160	-282726	+	AF490838 NM_144489 AK054584	-282997	+	TSC_hg19_v1_chr9_-_116840540 CU692002 AB463406 X04494	201293	-	TSC_hg19_v1_chr9_-_116840546 AY544123	201340	-	TSC_hg19_v1_chr9_-_116840581 X04225 AK290837	201362	-	BC036039|ZNF618|114991|zinc finger protein 618##NM_133374|ZNF618|114991|zinc finger protein 618##BC136287|ZNF618|114991|zinc finger protein 618##BC143826|ZNF618|114991|zinc finger protein 618##AK126896|ZNF618|114991|zinc finger protein 618##BC053892|ZNF618|114991|zinc finger protein 618##BC018072|RGS3|5998|regulator of G-protein signaling 3##BC019039|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3##X04494|AMBP|259|alpha-1-microglobulin/bikunin precursor##AY544123|AMBP|259|alpha-1-microglobulin/bikunin precursor##X04225|AMBP|259|alpha-1-microglobulin/bikunin precursor##AK290837|AMBP|259|alpha-1-microglobulin/bikunin precursor	0.743857	CTCF.p2:34:0.744
chr20	49631781	49631903	reg1024442.p1	6.469	+	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-56474	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-56779	-	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	-84119	-	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	7815	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	527297	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	527433	-	BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.0	
chr5	171797776	171797903	reg1022735.p1	6.469	+	NM_152277 TSC_hg19_v1_chr5_-_171710808	-87024	-	BC019910 TSC_hg19_v1_chr5_-_171710765 AK313274	-87135	-	NM_001171183	-176664	+	AB430862 DQ109556 BC038561 TSC_hg19_v1_chr5_-_171881387	83532	-	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	83664	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	270414	+	NM_152277|UBTD2|92181|ubiquitin domain containing 2##BC019910|UBTD2|92181|ubiquitin domain containing 2##AK313274|UBTD2|92181|ubiquitin domain containing 2##NM_001171183|EFCAB9|285588|EF-hand calcium binding domain 9##AB430862|SH3PXD2B|285590|SH3 and PX domains 2B##DQ109556|SH3PXD2B|285590|SH3 and PX domains 2B##BC038561|SH3PXD2B|285590|SH3 and PX domains 2B##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)	0.017113	
chr8	128227313	128227446	reg1020722.p2	6.469	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-656655	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-656824	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1263966	-	DQ486513 NM_001159542	200477	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	520946	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	521111	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.0	
chrX	20145697	20145831	reg1022360.p2	6.469	+	AK027409 TSC_hg19_v1_chrX_-_20135017 AK303019 AK316117 AK296319 BC136379 BC089400 NM_001168465 NM_001168466 NM_152780	-10700	-	AK294788 NM_001168467	-11012	-	AY092822 TSC_hg19_v1_chrX_-_20009180	-136656	-	BT007064 EU831819 EU831896 TSC_hg19_v1_chrX_-_20159957 BC000793 BC110421 AK312320 BC067851 L18960 NM_001412	14112	-	AB102662 L07599 AB384785 BC096301 BC096302 BC096303 NM_004586 U08316 AK313932	138966	-	TSC_hg19_v1_chrX_-_20285001 AB208933	139193	-	AK027409|MAP7D2|256714|MAP7 domain containing 2##AK303019|MAP7D2|256714|MAP7 domain containing 2##AK316117|MAP7D2|256714|MAP7 domain containing 2##AK296319|MAP7D2|256714|MAP7 domain containing 2##BC136379|MAP7D2|256714|MAP7 domain containing 2##BC089400|MAP7D2|256714|MAP7 domain containing 2##NM_001168465|MAP7D2|256714|MAP7 domain containing 2##NM_001168466|MAP7D2|256714|MAP7 domain containing 2##NM_152780|MAP7D2|256714|MAP7 domain containing 2##AK294788|MAP7D2|256714|MAP7 domain containing 2##NM_001168467|MAP7D2|256714|MAP7 domain containing 2##AY092822|LOC729609|729609|uncharacterized LOC729609##BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##AB102662|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##L07599|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096301|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096302|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096303|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##NM_004586|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##U08316|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AK313932|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AB208933|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3	0.995154	CTCF.p2:-6:0.995
chr12	54730388	54730478	reg1022031.p2	6.468	+	TSC_hg19_v1_chr12_+_54718927 AK223188 BC002849 AB463530 CU678240	-11496	+	TSC_hg19_v1_chr12_+_54718925 AB047848 AF086911	-11508	+	TSC_hg19_v1_chr12_+_54718922 AK293377 AK295325	-11513	+	AF237762 AF282693 TSC_hg19_v1_chr12_-_54758271 BC020614 NM_020370 AK290394	27817	-	AB528580 CR457327 TSC_hg19_v1_chr12_-_54778374	47903	-	AK296564 TSC_hg19_v1_chr12_-_54778485 AF304052 NM_015481	48041	-	AK223188|COPZ1|22818|coatomer protein complex, subunit zeta 1##BC002849|COPZ1|22818|coatomer protein complex, subunit zeta 1##AB047848|COPZ1|22818|coatomer protein complex, subunit zeta 1##AF086911|COPZ1|22818|coatomer protein complex, subunit zeta 1##AK293377|COPZ1|22818|coatomer protein complex, subunit zeta 1##AK295325|COPZ1|22818|coatomer protein complex, subunit zeta 1##AF237762|GPR84|53831|G protein-coupled receptor 84##AF282693|GPR84|53831|G protein-coupled receptor 84##BC020614|GPR84|53831|G protein-coupled receptor 84##NM_020370|GPR84|53831|G protein-coupled receptor 84##AK290394|GPR84|53831|G protein-coupled receptor 84##CR457327|ZNF385A|25946|zinc finger protein 385A##AK296564|ZNF385A|25946|zinc finger protein 385A##AF304052|ZNF385A|25946|zinc finger protein 385A##NM_015481|ZNF385A|25946|zinc finger protein 385A	0.221117	CTCF.p2:-14:0.221
chr7	108515343	108515464	reg1024781.p1	6.468	+	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-305029	+	TSC_hg19_v1_chr7_+_108210292 AK092204	-305105	+	NM_012328 TSC_hg19_v1_chr7_+_108210266	-305169	+	NM_001024607	9233	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	2215720	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	2687081	-	AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AK092204|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_012328|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)	0.975235	CTCF.p2:-4:0.975
chr8	131762017	131762159	reg1026099.p1	6.468	+	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	-306057	-	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-733205	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-733394	-	NM_001115	290746	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1154269	+	TSC_hg19_v1_chr8_+_132916379 BC108667	1154289	+	NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC108667|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.999255	CTCF.p2:-9:0.999
chr13	70153609	70153722	reg1021053.p1	6.467	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-2349161	-	AK289924 NM_022843	-8164011	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-8164412	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	528876	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	2286594	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	2287098	-	BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)	0.892285	CTCF.p2:0:0.892
chr10	119866086	119866189	reg1019874.p1	6.466	+	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	-59707	+	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	-60093	-	TSC_hg19_v1_chr10_+_119302713 AB463605	-563394	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	235687	-	AK313269 AK290461 NM_004248	489021	-	CU691560 TSC_hg19_v1_chr10_-_120514298	648150	-	BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A##AK313269|PRLHR|2834|prolactin releasing hormone receptor##AK290461|PRLHR|2834|prolactin releasing hormone receptor##NM_004248|PRLHR|2834|prolactin releasing hormone receptor	0.0	
chr11	71503817	71503954	reg1022159.p1	6.466	+	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	-5278	+	BC130498 BC130502 AB126080 NM_001005405	-209971	-	AB126079 BC137550 BC137566 NM_001012710	-227277	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	21021	-	AF529416 NM_001002035	40360	+	NM_001242853	85613	+	NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1##BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11##AB126079|KRTAP5-10|387273|keratin associated protein 5-10##BC137550|KRTAP5-10|387273|keratin associated protein 5-10##BC137566|KRTAP5-10|387273|keratin associated protein 5-10##NM_001012710|KRTAP5-10|387273|keratin associated protein 5-10##BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene##AF529416|DEFB108B|245911|defensin, beta 108B##NM_001002035|DEFB108B|245911|defensin, beta 108B##NM_001242853|LOC100129216|100129216|beta-defensin 131-like	0.989712	CTCF.p2:-2:0.990
chr17	46749135	46749244	reg1020179.p1	6.466	+	AK056123 AB464577 AK315480 BC015565 AK056414 NM_024017 TSC_hg19_v1_chr17_-_46703952	-45401	-	AK096222 NM_024016	-56889	-	TSC_hg19_v1_chr17_-_46688363 AK223249 M16937 NM_004502	-60817	-	BC030950 AF331165 NM_032391	50691	-	BT007410 AB464574 DQ893517 DQ896496 U57052 BC007092 BC070233 AK313266 AK225234 NM_006361 AY937237	56847	-	CU689652 BC033563 NM_173623 AK310321	122456	-	AK056123|HOXB9|3219|homeobox B9##AK315480|HOXB9|3219|homeobox B9##BC015565|HOXB9|3219|homeobox B9##AK056414|HOXB9|3219|homeobox B9##NM_024017|HOXB9|3219|homeobox B9##AK096222|HOXB8|3218|homeobox B8##NM_024016|HOXB8|3218|homeobox B8##AK223249|HOXB7|3217|homeobox B7##M16937|HOXB7|3217|homeobox B7##NM_004502|HOXB7|3217|homeobox B7##BC030950|PRAC|84366|prostate cancer susceptibility candidate##AF331165|PRAC|84366|prostate cancer susceptibility candidate##NM_032391|PRAC|84366|prostate cancer susceptibility candidate##BT007410|HOXB13|10481|homeobox B13##DQ893517|HOXB13|10481|homeobox B13##DQ896496|HOXB13|10481|homeobox B13##U57052|HOXB13|10481|homeobox B13##BC007092|HOXB13|10481|homeobox B13##BC070233|HOXB13|10481|homeobox B13##AK313266|HOXB13|10481|homeobox B13##AK225234|HOXB13|10481|homeobox B13##NM_006361|HOXB13|10481|homeobox B13##AY937237|HOXB13|10481|homeobox B13##BC033563|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_173623|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK310321|TTLL6|284076|tubulin tyrosine ligase-like family, member 6	0.82428	CTCF.p2:-14:0.824
chr22	19744163	19744315	reg1021738.p2	6.466	+	AF012130 AF012131 AF373867 NM_005992 NM_080646 NM_080647	-14	+	NM_000407 J03259	-33172	+	L20860 TSC_hg19_v1_chr22_+_19710169	-34096	+	TSC_hg19_v1_chr22_-_19842337 AK291262 BX640785 BX640969 BX640998	98102	-	TSC_hg19_v1_chr22_-_19842398 BC012060 NM_024627 BC008696 AB051432 AL832509 AF301895 AF238328 AY007378 NM_053004	98166	-	TSC_hg19_v1_chr22_-_19929293 AB209724	185039	-	AF012130|TBX1|6899|T-box 1##AF012131|TBX1|6899|T-box 1##AF373867|TBX1|6899|T-box 1##NM_005992|TBX1|6899|T-box 1##NM_080646|TBX1|6899|T-box 1##NM_080647|TBX1|6899|T-box 1##NM_000407|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide##J03259|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide##L20860|SEPT5-GP1BB|100526833|SEPT5-GP1BB readthrough##AK291262|C22orf29|79680|chromosome 22 open reading frame 29##BX640785|C22orf29|79680|chromosome 22 open reading frame 29##BX640969|C22orf29|79680|chromosome 22 open reading frame 29##BX640998|C22orf29|79680|chromosome 22 open reading frame 29##BC012060|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_024627|C22orf29|79680|chromosome 22 open reading frame 29##BC008696|C22orf29|79680|chromosome 22 open reading frame 29##AB051432|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AL832509|C22orf29|79680|chromosome 22 open reading frame 29##AF301895|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AF238328|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AY007378|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_053004|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AB209724|TXNRD2|10587|thioredoxin reductase 2	0.898696	CTCF.p2:-6:0.883
chr22	39472986	39473165	reg1021679.p1	6.466	+	AK294810 NM_001006666 NM_145298	-36435	+	NM_152426 TSC_hg19_v1_chr22_+_39417130	-55948	+	CR456394 TSC_hg19_v1_chr22_+_39410295 AB208979 AB590057 CU012952 CU013240	-62749	+	AK092614 NM_021822 AK315650 BC061914 AF182420 CR456472 BC009683 BC024268 AB266487 AB462950 CU013022 CU013310 CU692904 JF262036	112	+	NM_001166002 NM_001166003 NM_001166004 NM_181773 BC069023 CR456481	20195	+	TSC_hg19_v1_chr22_-_39529023 BC128418	55972	-	AK294810|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_001006666|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_145298|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_152426|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AK092614|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_021822|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK315650|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC061914|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AF182420|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CR456472|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC009683|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC024268|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AB266487|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013022|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013310|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##JF262036|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC128418|CBX7|23492|chromobox homolog 7	0.0	
chr1	146401714	146401825	reg1021485.p1	6.465	+	BC136292 NM_183372 AL832622	-319071	-	AF419617 NM_001101663	-333525	-	NM_001097616	-517902	+	AJ224538 HQ257946 TSC_hg19_v1_chr1_-_146643798	241996	-	AK316005 AK292820 AK304069 AK310982 BC053610 NM_005399 AK294863 AK316183	242323	-	AK295985 TSC_hg19_v1_chr1_+_146649617	247811	+	BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##AF419617|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_001101663|NBPF24|728912|neuroblastoma breakpoint family, member 24##NM_001097616|GPR89C|728932|G protein-coupled receptor 89C##AJ224538|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##HQ257946|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316005|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK292820|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK304069|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK310982|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##BC053610|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##NM_005399|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK294863|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316183|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	0.968636	CTCF.p2:15:0.969
chr17	5095259	5095391	reg1020760.p2	6.465	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-152	-	AY143550 NM_004505 X63546 X63547	-63639	+	NM_014519 AK316369 TSC_hg19_v1_chr17_-_5026412	-68921	-	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	55	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	42776	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	90341	+	AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##AY143550|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##NM_004505|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63546|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63547|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##NM_014519|ZNF232|7775|zinc finger protein 232##AK316369|ZNF232|7775|zinc finger protein 232##AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1	0.0	
chr10	15304179	15304294	reg1022713.p2	6.464	+	BT007024 CU675371 DQ890667 DQ893848 BC006376 AK315085 AK094904 AF043325 TSC_hg19_v1_chr10_-_15210693 NM_004808	-93575	-	BC157831 BC171823 TSC_hg19_v1_chr10_-_15197364	-106881	-	TSC_hg19_v1_chr10_+_15139363 AK057006 U77664 BC029494	-164873	+	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	108913	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	457557	-	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	598255	-	BT007024|NMT2|9397|N-myristoyltransferase 2##DQ890667|NMT2|9397|N-myristoyltransferase 2##DQ893848|NMT2|9397|N-myristoyltransferase 2##BC006376|NMT2|9397|N-myristoyltransferase 2##AK315085|NMT2|9397|N-myristoyltransferase 2##AK094904|NMT2|9397|N-myristoyltransferase 2##AF043325|NMT2|9397|N-myristoyltransferase 2##NM_004808|NMT2|9397|N-myristoyltransferase 2##BC157831|LOC100192204|100192204|peptidylprolyl isomerase A (cyclophilin A) pseudogene##AK057006|RPP38|10557|ribonuclease P/MRP 38kDa subunit##U77664|RPP38|10557|ribonuclease P/MRP 38kDa subunit##BC029494|RPP38|10557|ribonuclease P/MRP 38kDa subunit##AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A	0.0	
chr8	62526608	62526708	reg1021634.p1	6.464	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	-326108	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-935256	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-935370	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	75688	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	100360	-	TSC_hg19_v1_chr8_-_62627152 BC015518 BC025236 AK298577	100480	-	NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase##BC015518|ASPH|444|aspartate beta-hydroxylase##BC025236|ASPH|444|aspartate beta-hydroxylase##AK298577|ASPH|444|aspartate beta-hydroxylase	0.966538	CTCF.p2:2:0.967
chrX	105120776	105120912	reg1024785.p1	6.464	+	TSC_hg19_v1_chrX_+_105066559 AK131549	-54278	+	TSC_hg19_v1_chrX_+_105066535 BX538345 NM_198465 BC108702	-54306	+	BC108734 AF285597 BC042547 NM_031274	-655491	-	TSC_hg19_v1_chrX_-_105282719 AK310778 NM_000354	161885	-	BC031229 NM_001171020 NM_152423	291453	+	NM_001184782 NM_018015 TSC_hg19_v1_chrX_+_105855208 BC047503 AK001040 BC070110 AK291730 BC011483 BC033709 BC054032 CU687040 CU689708	734390	+	AK131549|NRK|203447|Nik related kinase##BX538345|NRK|203447|Nik related kinase##NM_198465|NRK|203447|Nik related kinase##BC108702|NRK|203447|Nik related kinase##BC108734|TEX13A|56157|testis expressed 13A##AF285597|TEX13A|56157|testis expressed 13A##BC042547|TEX13A|56157|testis expressed 13A##NM_031274|TEX13A|56157|testis expressed 13A##AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##BC031229|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_001171020|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_152423|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_001184782|CXorf57|55086|chromosome X open reading frame 57##NM_018015|CXorf57|55086|chromosome X open reading frame 57##BC047503|CXorf57|55086|chromosome X open reading frame 57##AK001040|CXorf57|55086|chromosome X open reading frame 57##BC070110|CXorf57|55086|chromosome X open reading frame 57##AK291730|CXorf57|55086|chromosome X open reading frame 57##BC011483|CXorf57|55086|chromosome X open reading frame 57##BC033709|CXorf57|55086|chromosome X open reading frame 57##BC054032|CXorf57|55086|chromosome X open reading frame 57	0.996113	CTCF.p2:9:0.996
chr14	98605054	98605184	reg1022091.p1	6.463	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-1341404	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-1636335	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-1636373	+	AK098639 NM_182560	572830	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	1132498	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	1132771	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.998053	CTCF.p2:0:0.998
chr22	20116873	20116976	reg1022501.p1	6.463	+	TSC_hg19_v1_chr22_+_20105145 AB587487 CU013156 CU013444	-11767	+	TSC_hg19_v1_chr22_+_20105095 CR456556	-11818	+	TSC_hg19_v1_chr22_+_20105076 AK293502 BC071998	-11840	+	TSC_hg19_v1_chr22_+_20119357 AY894890 BC053544 NM_001185024 NM_013373 AK131238	2509	+	NM_001243537	20506	-	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	138843	-	CU013156|RANBP1|5902|RAN binding protein 1##CU013444|RANBP1|5902|RAN binding protein 1##CR456556|RANBP1|5902|RAN binding protein 1##AK293502|RANBP1|5902|RAN binding protein 1##BC071998|RANBP1|5902|RAN binding protein 1##AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8##BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8##AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001243537|LOC388849|388849|uncharacterized LOC388849##AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor	0.858943	CTCF.p2:7:0.859
chr2	60379481	60379626	reg1023862.p1	6.463	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-1911071	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-2105565	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-2105799	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	400969	-	AF080216 TSC_hg19_v1_chr2_-_60780784	401225	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	603931	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.0	
chr6	145535742	145535897	reg1018692.p1	6.463	+	NM_007124 X69086	-922901	+	TSC_hg19_v1_chr6_+_144607461 AK292506	-928339	+	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	-1064098	+	AK124757 TSC_hg19_v1_chr6_+_146056061	520215	+	TSC_hg19_v1_chr6_-_146056437 AJ130763 AJ130764	520594	-	AF454494 TSC_hg19_v1_chr6_-_146056628 AF454493 BC005286 AF084535	520782	-	NM_007124|UTRN|7402|utrophin##X69086|UTRN|7402|utrophin##AK292506|UTRN|7402|utrophin##NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11##AK124757|LOC100507557|100507557|uncharacterized LOC100507557##AJ130763|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AJ130764|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454494|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454493|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##BC005286|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF084535|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	0.999016	CTCF.p2:4:0.999
chr9	132175962	132176119	reg1021760.p3	6.463	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-92745	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-235500	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-235533	-	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	75314	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	75401	+	BC112353 AK093122 AX747938 NM_199350	206997	-	AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50	0.0	
chr19	34711505	34711632	reg1021274.p1	6.462	+	TSC_hg19_v1_chr19_+_34710343 AL117499	-1188	+	TSC_hg19_v1_chr19_+_34663440 AL834398 AK027643 AB069974 AB069975	-48100	+	TSC_hg19_v1_chr19_+_34663429 AK300208	-48142	+	TSC_hg19_v1_chr19_+_34745535 NM_014686 AB002353 BX648432	33942	+	TSC_hg19_v1_chr19_+_34856083 NM_001184722 AK294396 NM_000175	144272	+	TSC_hg19_v1_chr19_+_34856150 AB209575 AK301103	144570	+	AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AL834398|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK027643|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069974|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069975|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK300208|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_014686|KIAA0355|9710|KIAA0355##AB002353|KIAA0355|9710|KIAA0355##NM_001184722|GPI|2821|glucose-6-phosphate isomerase##AK294396|GPI|2821|glucose-6-phosphate isomerase##NM_000175|GPI|2821|glucose-6-phosphate isomerase##AB209575|GPI|2821|glucose-6-phosphate isomerase##AK301103|GPI|2821|glucose-6-phosphate isomerase	0.999914	CTCF.p2:0:1.000
chr3	120137885	120137993	reg1021815.p2	6.462	+	TSC_hg19_v1_chr3_-_120068162 AB528173 AM393236 BC013757 NM_001099678	-69798	-	NM_001168271 NM_153002	-174798	-	TSC_hg19_v1_chr3_+_119813618 BC035247	-324269	+	TSC_hg19_v1_chr3_-_120169846 AB527652 D89937 BC000055 U06863 AK300356 AK289388 AK291138 AK311050 AK300436 BX647421 AK312261 NM_007085	31898	-	NM_001168331 NM_004547 BC000855 BC146885 BC146887 BC146927 BC146932 TSC_hg19_v1_chr3_+_120315168	177208	+	TSC_hg19_v1_chr3_+_120315182 BC070285 AF044957 DQ891096 DQ894273 DQ894278 BC034579	177253	+	AM393236|LRRC58|116064|leucine rich repeat containing 58##BC013757|LRRC58|116064|leucine rich repeat containing 58##NM_001099678|LRRC58|116064|leucine rich repeat containing 58##NM_001168271|GPR156|165829|G protein-coupled receptor 156##NM_153002|GPR156|165829|G protein-coupled receptor 156##BC000055|FSTL1|11167|follistatin-like 1##U06863|FSTL1|11167|follistatin-like 1##AK300356|FSTL1|11167|follistatin-like 1##AK289388|FSTL1|11167|follistatin-like 1##AK291138|FSTL1|11167|follistatin-like 1##AK311050|FSTL1|11167|follistatin-like 1##AK300436|FSTL1|11167|follistatin-like 1##BX647421|FSTL1|11167|follistatin-like 1##AK312261|FSTL1|11167|follistatin-like 1##NM_007085|FSTL1|11167|follistatin-like 1##NM_001168331|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##NM_004547|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC000855|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146885|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146887|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146927|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146932|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC070285|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##AF044957|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ891096|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ894273|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ894278|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC034579|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa	0.137019	
chr4	48035953	48036078	reg1021937.p1	6.462	+	TSC_hg19_v1_chr4_+_48018788 BC067881 CR749484 NM_207330 AK095299	-17212	+	X64802 TSC_hg19_v1_chr4_-_48018662	-17378	-	AK292021 NM_000087	-21055	-	BC017829 L27071 NM_003328	100243	-	BC101711 BC101713 BC143487 NM_003215 TSC_hg19_v1_chr4_-_48271858	235820	-	BC040993 TSC_hg19_v1_chr4_+_48343485 AK291006	307396	+	BC067881|NIPAL1|152519|NIPA-like domain containing 1##CR749484|NIPAL1|152519|NIPA-like domain containing 1##NM_207330|NIPAL1|152519|NIPA-like domain containing 1##AK095299|NIPAL1|152519|NIPA-like domain containing 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1##AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1##BC017829|TXK|7294|TXK tyrosine kinase##L27071|TXK|7294|TXK tyrosine kinase##NM_003328|TXK|7294|TXK tyrosine kinase##BC101711|TEC|7006|tec protein tyrosine kinase##BC101713|TEC|7006|tec protein tyrosine kinase##BC143487|TEC|7006|tec protein tyrosine kinase##NM_003215|TEC|7006|tec protein tyrosine kinase##BC040993|SLAIN2|57606|SLAIN motif family, member 2##AK291006|SLAIN2|57606|SLAIN motif family, member 2	0.452462	CTCF.p2:-1:0.452
chr1	12374528	12374668	reg1022936.p1	6.461	+	TSC_hg19_v1_chr1_+_12290088 NM_015378 NM_018156 AJ608774 AJ608775 AL162331	-84491	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	-147487	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	-147537	+	TSC_hg19_v1_chr1_+_12403045 AK057675	28472	+	DQ426869 DQ893006 DQ896252 CU678154 AF061741 AK222593 BC002730 TSC_hg19_v1_chr1_-_12677700 AK310202 AY358093 AK309282 AK312961 BX648476 NM_004753	302985	-	NM_001013630	329967	+	NM_015378|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_018156|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608774|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608775|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AL162331|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AK057675|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_001013630|AADACL4|343066|arylacetamide deacetylase-like 4	0.013199	
chr17	80452642	80452782	reg1020803.p2	6.461	+	TSC_hg19_v1_chr17_+_80416616 BC016440 CU674220 CU677625	-36070	+	TSC_hg19_v1_chr17_+_80416583 AK297875 NM_001083608 NM_012336 NM_031968 BC000438 AK000929 AK303155 AK307351 AF128406	-36149	+	TSC_hg19_v1_chr17_+_80416087 NM_001038618 AK056966	-36640	+	TSC_hg19_v1_chr17_+_80477607 NM_004514	24878	+	TSC_hg19_v1_chr17_-_80606321 AK297477 BC000974 AM182326 AB464355 BC007838 NM_019613	153571	-	TSC_hg19_v1_chr17_-_80656575 BC035814 U05227 AB209711 BC018039 NM_006822	203822	-	BC016440|NARF|26502|nuclear prelamin A recognition factor##AK297875|NARF|26502|nuclear prelamin A recognition factor##NM_001083608|NARF|26502|nuclear prelamin A recognition factor##NM_012336|NARF|26502|nuclear prelamin A recognition factor##NM_031968|NARF|26502|nuclear prelamin A recognition factor##BC000438|NARF|26502|nuclear prelamin A recognition factor##AK000929|NARF|26502|nuclear prelamin A recognition factor##AK303155|NARF|26502|nuclear prelamin A recognition factor##AF128406|NARF|26502|nuclear prelamin A recognition factor##NM_001038618|NARF|26502|nuclear prelamin A recognition factor##AK056966|NARF|26502|nuclear prelamin A recognition factor##NM_004514|FOXK2|3607|forkhead box K2##AK297477|WDR45L|56270|WDR45-like##BC000974|WDR45L|56270|WDR45-like##AM182326|WDR45L|56270|WDR45-like##BC007838|WDR45L|56270|WDR45-like##NM_019613|WDR45L|56270|WDR45-like##BC035814|RAB40B|10966|RAB40B, member RAS oncogene family##U05227|RAB40B|10966|RAB40B, member RAS oncogene family##AB209711|RAB40B|10966|RAB40B, member RAS oncogene family##BC018039|RAB40B|10966|RAB40B, member RAS oncogene family##NM_006822|RAB40B|10966|RAB40B, member RAS oncogene family	0.98944	CTCF.p2:23:0.989
chr22	36239142	36239269	reg1022618.p2	6.461	+	TSC_hg19_v1_chr22_-_36236476 AF229058 AL009266 AK314632 BC013115 BC025281 AK291460 NM_001031695 NM_001082576 NM_001082577 NM_014309	-2680	-	CR456559 TSC_hg19_v1_chr22_-_36236341	-2865	-	AB463238 AB649123 AY960684 CU013159 CU013447 CU692956 DQ891720 DQ894897 DQ894898 TSC_hg19_v1_chr22_-_36236318	-2914	-	AY072786 DQ778625 TSC_hg19_v1_chr22_-_36424553 AK055213 NM_001082578 NM_001082579	185334	-	BC042918 BC038352 AK025349 AF070675 BC070144 AF305227 BC050596 AY014902 AY014903 AY014904 AY014905 NM_145640	317673	-	AY014906 AY014907 NM_145641 NM_145642	323019	-	AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AY072786|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ778625|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK055213|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082578|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082579|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC042918|APOL3|80833|apolipoprotein L, 3##BC038352|APOL3|80833|apolipoprotein L, 3##AK025349|APOL3|80833|apolipoprotein L, 3##AF070675|APOL3|80833|apolipoprotein L, 3##AF305227|APOL3|80833|apolipoprotein L, 3##BC050596|APOL3|80833|apolipoprotein L, 3##AY014902|APOL3|80833|apolipoprotein L, 3##AY014903|APOL3|80833|apolipoprotein L, 3##AY014904|APOL3|80833|apolipoprotein L, 3##AY014905|APOL3|80833|apolipoprotein L, 3##NM_145640|APOL3|80833|apolipoprotein L, 3##AY014906|APOL3|80833|apolipoprotein L, 3##AY014907|APOL3|80833|apolipoprotein L, 3##NM_145641|APOL3|80833|apolipoprotein L, 3##NM_145642|APOL3|80833|apolipoprotein L, 3	0.22499	CTCF.p2:12:0.225
chr8	65608275	65608389	reg1021979.p2	6.461	+	TSC_hg19_v1_chr8_+_65493611 AK091333	-114668	+	NM_152414 AK293979	-115474	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-1527132	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	102947	-	TSC_hg19_v1_chr8_-_66546394 AK001373	938063	-	TSC_hg19_v1_chr8_-_66546404 AK304463	938074	-	AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AK001373|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1	0.500574	CTCF.p2:12:0.501
chrX	41301547	41301684	reg1021117.p1	6.461	+	AK304661 TSC_hg19_v1_chrX_+_41193866 AK127902	-107750	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	-108158	+	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	-108965	+	AJ278865 AF254868 NM_022567	5084	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	246652	+	BC070180 NM_080817 AK122626 AK313702 AL832460	281805	+	AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AJ278865|NYX|60506|nyctalopin##AF254868|NYX|60506|nyctalopin##NM_022567|NYX|60506|nyctalopin##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82	1.021401	CTCF.p2:-9:0.999
chr10	38946202	38946334	reg1024717.p1	6.460	+	TSC_hg19_v1_chr10_-_38691741 BC171738 BC042387 BC048143	-254512	-	AK295332 AY829267 AF165514 AF165517 BC071987 TSC_hg19_v1_chr10_+_38645320 AK293968 AK307174 CU687208	-300931	+	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	-562985	+	TSC_hg19_v1_chr10_-_42863441 AF519622 AK131313	3917195	-	AX721135 TSC_hg19_v1_chr10_-_43048257 AK308832 AK026980 BC045697 AX721116	4101934	-	TSC_hg19_v1_chr10_-_43134018 BC109232 BC160932 BC065181 BC107726 BC048313 AJ491697 NM_006955 AK096683 AK309564 AK304306 BC036398	4187730	-	BC171738|SEPT7L|285961|septin 7-like##BC042387|SEPT7L|285961|septin 7-like##BC048143|SEPT7L|285961|septin 7-like##AK295332|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AY829267|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165514|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165517|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC071987|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK293968|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK307174|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A##AF519622|LOC441666|441666|zinc finger protein 91 pseudogene##AK308832|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##AK026980|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC045697|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC109232|ZNF33B|7582|zinc finger protein 33B##BC160932|ZNF33B|7582|zinc finger protein 33B##BC065181|ZNF33B|7582|zinc finger protein 33B##BC107726|ZNF33B|7582|zinc finger protein 33B##BC048313|ZNF33B|7582|zinc finger protein 33B##AJ491697|ZNF33B|7582|zinc finger protein 33B##NM_006955|ZNF33B|7582|zinc finger protein 33B##AK096683|ZNF33B|7582|zinc finger protein 33B##AK309564|ZNF33B|7582|zinc finger protein 33B##AK304306|ZNF33B|7582|zinc finger protein 33B##BC036398|ZNF33B|7582|zinc finger protein 33B	0.015151	
chr15	61080075	61080180	reg1020367.p1	6.460	+	U04899 U04898 NM_002943 NM_134260	-160442	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	-195448	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-308853	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	441297	-	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	441370	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	1272487	-	U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	0.0	
chr17	28927512	28927692	reg1021938.p2	6.460	+	BC096718 BC098126 BC098273 NM_015594	-41019	+	TSC_hg19_v1_chr17_+_28804434 AK000606 AK291381 NM_001007024 NM_001007025 NM_004871 AK298714 AF047438 BC012620 AF073926 BC040471	-123169	+	AK316409 NM_001199775 AK302878	-220087	+	TSC_hg19_v1_chr17_+_29058664 BC047718	131086	+	TSC_hg19_v1_chr17_-_29151711 DQ298450 DQ892276 CU692798 AK296238 AF046059 BC023567	224073	-	TSC_hg19_v1_chr17_-_29151725 AK313315 NM_015986	224161	-	BC096718|TBC1D29|26083|TBC1 domain family, member 29##BC098126|TBC1D29|26083|TBC1 domain family, member 29##BC098273|TBC1D29|26083|TBC1 domain family, member 29##NM_015594|TBC1D29|26083|TBC1 domain family, member 29##AK000606|GOSR1|9527|golgi SNAP receptor complex member 1##AK291381|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1##NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1##AK298714|GOSR1|9527|golgi SNAP receptor complex member 1##AF047438|GOSR1|9527|golgi SNAP receptor complex member 1##BC012620|GOSR1|9527|golgi SNAP receptor complex member 1##AF073926|GOSR1|9527|golgi SNAP receptor complex member 1##BC040471|GOSR1|9527|golgi SNAP receptor complex member 1##AK316409|CPD|1362|carboxypeptidase D##NM_001199775|CPD|1362|carboxypeptidase D##AK302878|CPD|1362|carboxypeptidase D##BC047718|SUZ12P|440423|suppressor of zeste 12 homolog pseudogene##DQ298450|CRLF3|51379|cytokine receptor-like factor 3##DQ892276|CRLF3|51379|cytokine receptor-like factor 3##AK296238|CRLF3|51379|cytokine receptor-like factor 3##AF046059|CRLF3|51379|cytokine receptor-like factor 3##BC023567|CRLF3|51379|cytokine receptor-like factor 3##AK313315|CRLF3|51379|cytokine receptor-like factor 3##NM_015986|CRLF3|51379|cytokine receptor-like factor 3	0.0	
chrX	152110258	152110368	reg1022841.p1	6.460	+	NM_001178115 AK095258	-84	+	AK301530 NM_001178113	-23905	+	AK296967 NM_001178106 NM_001178107 NM_001178108 NM_001178109 NM_001178110 NM_007150 AY997296 DQ508022 DQ508023 DQ508024 DQ508025 DQ508026	-27304	+	BC101111 BC101112 BC101113 BC101114 AK295446 AK316104 AB067521 AY121806 NM_001103150 NM_001103151 NM_052926	50369	-	NM_001184924	52357	-	NM_013364 TSC_hg19_v1_chrX_+_152224838 AK312299	114491	+	NM_001178115|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK095258|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK301530|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178113|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK296967|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178106|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178107|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178108|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178109|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178110|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_007150|ZNF185|7739|zinc finger protein 185 (LIM domain)##AY997296|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508022|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508023|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508024|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508025|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508026|ZNF185|7739|zinc finger protein 185 (LIM domain)##BC101111|PNMA5|114824|paraneoplastic antigen like 5##BC101112|PNMA5|114824|paraneoplastic antigen like 5##BC101113|PNMA5|114824|paraneoplastic antigen like 5##AK295446|PNMA5|114824|paraneoplastic antigen like 5##AK316104|PNMA5|114824|paraneoplastic antigen like 5##AB067521|PNMA5|114824|paraneoplastic antigen like 5##AY121806|PNMA5|114824|paraneoplastic antigen like 5##NM_001103150|PNMA5|114824|paraneoplastic antigen like 5##NM_001103151|PNMA5|114824|paraneoplastic antigen like 5##NM_052926|PNMA5|114824|paraneoplastic antigen like 5##NM_001184924|PNMA5|114824|paraneoplastic antigen like 5##NM_013364|PNMA3|29944|paraneoplastic antigen MA3##AK312299|PNMA3|29944|paraneoplastic antigen MA3	0.877681	CTCF.p2:7:0.878
chr11	85841287	85841414	reg1021916.p2	6.459	+	AK300275 NM_001206947	-60440	-	TSC_hg19_v1_chr11_-_85780127 AB210017 NM_001008660 NM_001206946 NM_007166 AK291414	-61226	-	TSC_hg19_v1_chr11_-_85780088 BC064357	-61255	-	TSC_hg19_v1_chr11_+_85955830 NM_003797 NM_152991 AK292120 AF080227	114509	+	AF070418 TSC_hg19_v1_chr11_+_85956058	114699	+	AF099032 U90651 TSC_hg19_v1_chr11_+_85956254	114867	+	AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AB210017|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001008660|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206946|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_007166|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AK291414|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC064357|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_003797|EED|8726|embryonic ectoderm development##NM_152991|EED|8726|embryonic ectoderm development##AK292120|EED|8726|embryonic ectoderm development##AF080227|EED|8726|embryonic ectoderm development##AF070418|EED|8726|embryonic ectoderm development##AF099032|EED|8726|embryonic ectoderm development##U90651|EED|8726|embryonic ectoderm development	0.0	
chr1	27935446	27935584	reg1001235.p2	6.459	+	BC064935 TSC_hg19_v1_chr1_-_27930394	-5138	-	BC042058 NM_001029882	-5394	-	TSC_hg19_v1_chr1_-_27816676 NM_001201404 NM_006990	-118839	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	17155	-	M27454 AK301078 BC002836 AK304846 NM_001042729	17560	-	TSC_hg19_v1_chr1_-_27961656 BC064382 AK130188 NM_005248	26171	-	BC064935|AHDC1|27245|AT hook, DNA binding motif, containing 1##NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1##NM_001201404|WASF2|10163|WAS protein family, member 2##NM_006990|WASF2|10163|WAS protein family, member 2##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##M27454|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK301078|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042729|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##BC064382|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK130188|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_005248|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	0.0	
chr15	102432104	102432210	reg1024087.p1	6.459	+	AY792621 NM_001195021	-49836	+	BC137064 BC137065 NM_001001674	-73780	+	BC137002 BC137003 NM_001005326	-86246	+	NM_001004195 BC136848 BC136867 BC136907 BC136908 AY972818 AY972819	31132	-	AL137714 AK302089 TSC_hg19_v1_chr15_+_102501817 AK291582 BC047449 BC063470 AK292759 AK300161 AK308540 AK308566 AK309926 AK095183 BC027921 AK295256	69595	+	TSC_hg19_v1_chr15_+_102501827 AK024448 BC067227 DQ786211	69681	+	AY792621|GPCRLTM7|100272148|putative olfactory receptor GPCRLTM7##NM_001195021|GPCRLTM7|100272148|putative olfactory receptor GPCRLTM7##BC137064|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##BC137065|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##NM_001001674|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001004195|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136848|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136867|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136907|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136908|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##AY972818|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AY972819|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK292759|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK295256|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK024448|WASH1|100287171|WAS protein family homolog 1##BC067227|WASH3P|374666|WAS protein family homolog 3 pseudogene##DQ786211|LOC100134445|100134445|uncharacterized LOC100134445	0.26573	CTCF.p2:-29:0.266
chr1	58501305	58501444	reg1024821.p1	6.459	+	TSC_hg19_v1_chr1_-_57888785 AK313144	-612546	-	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	-1069658	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	-1180866	+	TSC_hg19_v1_chr1_-_58716179 CR933698 AB210012	214808	-	TSC_hg19_v1_chr1_-_58716210 AK095513 NM_021080	214835	-	TSC_hg19_v1_chr1_-_59012387 AF263547 NM_145243 AB048348 BC012915 AK308847	511049	-	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##CR933698|DAB1|1600|disabled homolog 1 (Drosophila)##AB210012|DAB1|1600|disabled homolog 1 (Drosophila)##AK095513|DAB1|1600|disabled homolog 1 (Drosophila)##NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)##NM_145243|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AB048348|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BC012915|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AK308847|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)	0.192772	
chr9	77815936	77816069	reg1021418.p1	6.459	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	-112492	+	TSC_hg19_v1_chr9_+_77703406 NM_012383	-112602	+	BC001366 TSC_hg19_v1_chr9_-_77703070 AK000566 AK097144 AK023413 BC036804 NM_001127603 NM_017881 BC026243	-112914	-	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	689633	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	1193389	-	AY196293 NM_001097634	1240579	+	AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1##NM_012383|OSTF1|26578|osteoclast stimulating factor 1##BC001366|C9orf95|54981|chromosome 9 open reading frame 95##AK000566|C9orf95|54981|chromosome 9 open reading frame 95##AK097144|C9orf95|54981|chromosome 9 open reading frame 95##AK023413|C9orf95|54981|chromosome 9 open reading frame 95##BC036804|C9orf95|54981|chromosome 9 open reading frame 95##NM_001127603|C9orf95|54981|chromosome 9 open reading frame 95##NM_017881|C9orf95|54981|chromosome 9 open reading frame 95##BC026243|C9orf95|54981|chromosome 9 open reading frame 95##NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.999311	CTCF.p2:-13:0.999
chr11	60401762	60401896	reg1023854.p1	6.458	+	AY324188 AY324189 AY324190 NM_001012417 NM_001100909 BC140799 BC171746	-118881	+	AK000224 AK309275 NM_001164470 NM_017716 BC029793	-141573	+	NM_021950 NM_152866 AK225630 AK292168 AK300025 AK310118 BC002807 X07203 X12530	-178516	+	AF237905 NM_031457 AK310969 AK310884 AK315901 BC022895 AK308413 AF350504 AK310872	65303	+	NM_001098835 NM_152717 AK300233 BC031610 AK091846 AX747218 AY584608 AY584609	122580	+	AK122633 NM_206893 BC137259 BC137263	151016	+	AY324188|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324189|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324190|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001012417|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001100909|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC140799|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC171746|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AK000224|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_001164470|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_017716|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##BC029793|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_021950|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##NM_152866|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK225630|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK292168|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK300025|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK310118|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##BC002807|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##X07203|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##X12530|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AF237905|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_031457|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310969|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310884|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK315901|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##BC022895|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK308413|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AF350504|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310872|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_001098835|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##NM_152717|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK300233|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##BC031610|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK091846|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584608|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584609|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK122633|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_206893|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137259|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137263|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10	0.631735	CTCF.p2:5:0.632
chr11	61152521	61152649	reg1002962.p1	6.458	+	TSC_hg19_v1_chr11_+_61129845 AK027724 AK307371 AF151030 AK303219 BC005201 AF151032	-22731	+	TSC_hg19_v1_chr11_-_61129735 BC014045 BC004391 AK056751 NM_001161454 NM_153611	-22935	-	TSC_hg19_v1_chr11_+_61129442 NM_016464	-23012	+	TSC_hg19_v1_chr11_+_61160064 AK303687 NM_001173990 NM_001173991 NM_016499 BC011010	7367	+	TSC_hg19_v1_chr11_+_61160103 AF151078	7524	+	BC018135 TSC_hg19_v1_chr11_-_61197448 NM_024811 AK096343 AK294578 AL833332 BX537888 AL832667	44778	-	AK027724|TMEM138|51524|transmembrane protein 138##AK307371|TMEM138|51524|transmembrane protein 138##AF151030|TMEM138|51524|transmembrane protein 138##AK303219|TMEM138|51524|transmembrane protein 138##BC005201|TMEM138|51524|transmembrane protein 138##AF151032|TMEM138|51524|transmembrane protein 138##BC014045|CYBASC3|220002|cytochrome b, ascorbate dependent 3##BC004391|CYBASC3|220002|cytochrome b, ascorbate dependent 3##AK056751|CYBASC3|220002|cytochrome b, ascorbate dependent 3##NM_001161454|CYBASC3|220002|cytochrome b, ascorbate dependent 3##NM_153611|CYBASC3|220002|cytochrome b, ascorbate dependent 3##NM_016464|TMEM138|51524|transmembrane protein 138##AK303687|TMEM216|51259|transmembrane protein 216##NM_001173990|TMEM216|51259|transmembrane protein 216##NM_001173991|TMEM216|51259|transmembrane protein 216##NM_016499|TMEM216|51259|transmembrane protein 216##BC011010|TMEM216|51259|transmembrane protein 216##AF151078|TMEM216|51259|transmembrane protein 216##BC018135|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##NM_024811|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK096343|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK294578|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AL833332|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##BX537888|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AL832667|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa	0.467202	CTCF.p2:-5:0.467
chr16	32909325	32909467	reg1017474.p2	6.458	+	AK300387 TSC_hg19_v1_chr16_+_32752635	-156760	+	AL133588 NM_016212	-221344	-	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	-221963	-	AL133588 NM_016212	295583	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	296202	+	AL133588 NM_016212	352118	+	AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3	2.948006	CTCF.p2:-17:0.973	CTCF.p2:20:0.978
chr19	19026613	19026728	reg1021185.p1	6.458	+	TSC_hg19_v1_chr19_-_19007395 BC084582 AK293463	-19205	-	BC032615 TSC_hg19_v1_chr19_-_19006935 M62302 BC022450 NM_001492 NM_021267 NM_198207	-19719	-	TSC_hg19_v1_chr19_+_18942822 U65533 AF074016 D86988 U59323	-83857	+	AB528108 AM393761 CR456886 DQ893417 DQ896735 TSC_hg19_v1_chr19_-_19030164 BC017285 BC003155 AJ249366 AL136928 BC007250	3495	-	TSC_hg19_v1_chr19_-_19030180 AJ131182	3512	-	AK222584 AK315281 TSC_hg19_v1_chr19_-_19030195	3525	-	BC084582|CERS1|10715|ceramide synthase 1##BC032615|CERS1|10715|ceramide synthase 1##M62302|GDF1|2657|growth differentiation factor 1##NM_001492|GDF1|2657|growth differentiation factor 1##NM_021267|CERS1|10715|ceramide synthase 1##NM_198207|CERS1|10715|ceramide synthase 1##U65533|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##AF074016|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##D86988|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##U59323|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##AM393761|COPE|11316|coatomer protein complex, subunit epsilon##CR456886|COPE|11316|coatomer protein complex, subunit epsilon##DQ893417|COPE|11316|coatomer protein complex, subunit epsilon##DQ896735|COPE|11316|coatomer protein complex, subunit epsilon##BC017285|COPE|11316|coatomer protein complex, subunit epsilon##BC003155|COPE|11316|coatomer protein complex, subunit epsilon##AJ249366|COPE|11316|coatomer protein complex, subunit epsilon##AL136928|COPE|11316|coatomer protein complex, subunit epsilon##BC007250|COPE|11316|coatomer protein complex, subunit epsilon##AJ131182|COPE|11316|coatomer protein complex, subunit epsilon##AK222584|COPE|11316|coatomer protein complex, subunit epsilon##AK315281|COPE|11316|coatomer protein complex, subunit epsilon	0.983683	CTCF.p2:-12:0.984
chr3	100515494	100515667	reg1023040.p1	6.458	+	TSC_hg19_v1_chr3_+_100428396 BC041600 BC023599	-87116	+	TSC_hg19_v1_chr3_+_100428385 BC001483 NM_001195478	-87207	+	NM_001007565 NM_001195479 NM_006070 TSC_hg19_v1_chr3_+_100428337 AK093456 BC009241	-87335	+	CU688850 EU832117 EU832211 AK025204 AL833204 BC030221 TSC_hg19_v1_chr3_-_100712327 NM_015429	196710	-	AF173155 AB593127 NM_016247 DQ980603 DQ980602	523842	-	AM392620 AM393440 TSC_hg19_v1_chr3_-_101232029 AK297356 BC129988 BC062674 BX537943 AL833577 AF199458 NM_001077203 NM_020654	716448	-	BC041600|TFG|10342|TRK-fused gene##BC023599|TFG|10342|TRK-fused gene##BC001483|TFG|10342|TRK-fused gene##NM_001195478|TFG|10342|TRK-fused gene##NM_001007565|TFG|10342|TRK-fused gene##NM_001195479|TFG|10342|TRK-fused gene##NM_006070|TFG|10342|TRK-fused gene##AK093456|TFG|10342|TRK-fused gene##BC009241|TFG|10342|TRK-fused gene##EU832117|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##EU832211|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AK025204|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AL833204|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##BC030221|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##NM_015429|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AB593127|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7##AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7##AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7##BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7##AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7##AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7	0.281037	CTCF.p2:28:0.281
chr3	184933806	184933904	reg1021180.p1	6.458	+	TSC_hg19_v1_chr3_-_184870849 AK091454 AX746993 NM_001025266	-63057	-	TSC_hg19_v1_chr3_-_184870632 BC137178 BC137179 BC150565	-63202	-	TSC_hg19_v1_chr3_+_184529983 BC140768	-403860	+	BC038948 BC110460 L07077 AK301521 TSC_hg19_v1_chr3_-_184971838 AK223460 AK291798 BC011030 BC030982 NM_001166415 NM_001966	37995	-	TSC_hg19_v1_chr3_+_185000783 NM_001242314 NM_001242317 AK297646 BC036593 AK312714 BC015996	66894	+	AK302951 TSC_hg19_v1_chr3_+_185046682 BC031677	112836	+	NM_001025266|C3orf70|285382|chromosome 3 open reading frame 70##BC137178|C3orf70|285382|chromosome 3 open reading frame 70##BC137179|C3orf70|285382|chromosome 3 open reading frame 70##BC150565|C3orf70|285382|chromosome 3 open reading frame 70##BC140768|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001242314|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_001242317|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK297646|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC036593|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK312714|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC015996|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK302951|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC031677|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	0.651263	CTCF.p2:1:0.651
chr2	37899460	37899580	reg1023381.p1	6.457	+	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	-131	-	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	-741	-	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-327707	+	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	252912	+	BC024243 NM_001170792	256381	+	NM_001170793 NM_144713 AK057516 AF435956	278080	+	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1##BC024243|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1	0.014363	
chr3	6246713	6246841	reg1023565.p1	6.457	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-1017286	+	TSC_hg19_v1_chr3_+_5229430 D86967	-1017344	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	-1017414	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	656022	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	656121	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	2296553	-	DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK124088|LOC100288428|100288428|uncharacterized LOC100288428	0.545008	CTCF.p2:0:0.545
chr6	130686578	130686677	reg1021321.p1	6.457	+	AK091882 AX747235 NM_001017373	-142529	-	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	-150172	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	-346902	+	AB052099 NM_052913	71634	+	BC113027 NM_001195597 AK091900 AX747243 BC101422 BC101423 BC101424 BC101425 BC113026 TSC_hg19_v1_chr6_+_131148577	461935	+	TSC_hg19_v1_chr6_-_131291480 AK307764 NM_001199389	604924	-	AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A##BC113027|LOC100507203|100507203|uncharacterized LOC100507203##NM_001195597|LOC100507203|100507203|uncharacterized LOC100507203##AK091900|LOC100507203|100507203|uncharacterized LOC100507203##BC101422|LOC100507203|100507203|uncharacterized LOC100507203##BC101423|LOC100507203|100507203|uncharacterized LOC100507203##BC101424|LOC100507203|100507203|uncharacterized LOC100507203##BC101425|LOC100507203|100507203|uncharacterized LOC100507203##BC113026|LOC100507203|100507203|uncharacterized LOC100507203##AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	0.0	
chr7	127775815	127775923	reg1020981.p1	6.457	+	BC111561 BC111745 AF196976 AJ297858 NM_022143 AK172751 TSC_hg19_v1_chr7_-_127671066 AK314047	-104833	-	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	-483533	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	-483633	+	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	105464	+	CU680694 TSC_hg19_v1_chr7_-_127983862	207985	-	TSC_hg19_v1_chr7_-_127983944 BC013889 AK222716 AK300500 AK295976 AK001239 NM_001166135 NM_018077	208067	-	BC111561|LRRC4|64101|leucine rich repeat containing 4##BC111745|LRRC4|64101|leucine rich repeat containing 4##AF196976|LRRC4|64101|leucine rich repeat containing 4##AJ297858|LRRC4|64101|leucine rich repeat containing 4##NM_022143|LRRC4|64101|leucine rich repeat containing 4##AK172751|LRRC4|64101|leucine rich repeat containing 4##AK314047|LRRC4|64101|leucine rich repeat containing 4##BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin##BC013889|RBM28|55131|RNA binding motif protein 28##AK222716|RBM28|55131|RNA binding motif protein 28##AK300500|RBM28|55131|RNA binding motif protein 28##AK001239|RBM28|55131|RNA binding motif protein 28##NM_001166135|RBM28|55131|RNA binding motif protein 28##NM_018077|RBM28|55131|RNA binding motif protein 28	0.873144	CTCF.p2:28:0.873
chr3	196190011	196190192	reg1014029.p2	6.456	+	TSC_hg19_v1_chr3_-_196159304 NM_015562	-30768	-	TSC_hg19_v1_chr3_-_196159299 AK026451 AK129880 AK303630 AK308699 AK307899	-30802	-	AB018337 TSC_hg19_v1_chr3_-_196159295 BC047420	-30818	-	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	40477	-	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	52112	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	105289	-	NM_015562|UBXN7|26043|UBX domain protein 7##AK026451|UBXN7|26043|UBX domain protein 7##AK129880|UBXN7|26043|UBX domain protein 7##AK303630|UBXN7|26043|UBX domain protein 7##AK308699|UBXN7|26043|UBX domain protein 7##AK307899|UBXN7|26043|UBX domain protein 7##AB018337|UBXN7|26043|UBX domain protein 7##BC047420|UBXN7|26043|UBX domain protein 7##BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53	0.0	
chr3	97438192	97438294	reg1021610.p2	6.456	+	AK302040 AK310249 BC031881 BC067287 AK302080 AL133666 NM_173655	-279772	+	NM_001080448 TSC_hg19_v1_chr3_+_96533435 AK092565 AX747601	-904813	+	AK122674 NM_001195643	-3656177	-	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	45357	+	TSC_hg19_v1_chr3_+_97540854 AK296966	102627	+	TSC_hg19_v1_chr3_-_97691261 NM_001042533 NM_032778 AK027299 DQ453796 AB083192 NM_153182	253034	-	AK302040|EPHA6|285220|EPH receptor A6##AK310249|EPHA6|285220|EPH receptor A6##BC031881|EPHA6|285220|EPH receptor A6##BC067287|EPHA6|285220|EPH receptor A6##AK302080|EPHA6|285220|EPH receptor A6##AL133666|EPHA6|285220|EPH receptor A6##NM_173655|EPHA6|285220|EPH receptor A6##NM_001080448|EPHA6|285220|EPH receptor A6##AK092565|EPHA6|285220|EPH receptor A6##AK122674|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1##BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6##AK296966|CRYBG3|131544|beta-gamma crystallin domain containing 3##NM_001042533|MINA|84864|MYC induced nuclear antigen##NM_032778|MINA|84864|MYC induced nuclear antigen##AK027299|MINA|84864|MYC induced nuclear antigen##DQ453796|MINA|84864|MYC induced nuclear antigen##AB083192|MINA|84864|MYC induced nuclear antigen##NM_153182|MINA|84864|MYC induced nuclear antigen	0.994652	CTCF.p2:-2:0.995
chr9	95491786	95491935	reg1020795.p2	6.456	+	TSC_hg19_v1_chr9_-_95432542 BC026154 NM_022755	-59303	-	AF520811 TSC_hg19_v1_chr9_-_95432355 AK023225 AF351202	-59547	-	AB011792 AK303922 AK312820 AK296458 BX537976 NM_001197295 NM_001197296 NM_001393	-193548	-	AB014599 TSC_hg19_v1_chr9_-_95527124 AY052562 NM_001003800 NM_015250 BC073970	35223	-	AK299274 TSC_hg19_v1_chr9_-_95640325 AK091203 AX746846 NM_001007101 AL833202 NM_031486 AK292997 AK309617	148417	-	NM_001083536	217740	+	BC026154|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##NM_022755|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF520811|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AK023225|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF351202|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AB014599|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AY052562|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_001003800|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_015250|BICD2|23299|bicaudal D homolog 2 (Drosophila)##BC073970|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AK299274|ZNF484|83744|zinc finger protein 484##AK091203|ZNF484|83744|zinc finger protein 484##NM_001007101|ZNF484|83744|zinc finger protein 484##AL833202|ZNF484|83744|zinc finger protein 484##NM_031486|ZNF484|83744|zinc finger protein 484##AK292997|ZNF484|83744|zinc finger protein 484##AK309617|ZNF484|83744|zinc finger protein 484##NM_001083536|FGD3|89846|FYVE, RhoGEF and PH domain containing 3	1.067607	CTCF.p2:-9:0.878
chr19	18581168	18581312	reg1019949.p2	6.455	+	AK296022 TSC_hg19_v1_chr19_-_18548975 AK092179 AX747394 NM_001170938 NM_016368	-32200	-	CU676344 DQ893465 DQ896336 AK001325 TSC_hg19_v1_chr19_-_18548942 AK093461 NM_001170939 AF207640 BC018952 AF086921 BC017189 BC066902 AF220530 AK021526	-32364	-	AL137749 NM_001253389	-33122	-	AB208794 TSC_hg19_v1_chr19_-_18632875 AK293105 AK225481 U16282	51626	-	TSC_hg19_v1_chr19_-_18632948 BC049195 NM_006532	51687	-	TSC_hg19_v1_chr19_-_18653874 AK300571	72537	-	AK296022|ISYNA1|51477|inositol-3-phosphate synthase 1##AK092179|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001170938|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_016368|ISYNA1|51477|inositol-3-phosphate synthase 1##DQ893465|ISYNA1|51477|inositol-3-phosphate synthase 1##DQ896336|ISYNA1|51477|inositol-3-phosphate synthase 1##AK001325|ISYNA1|51477|inositol-3-phosphate synthase 1##AK093461|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001170939|ISYNA1|51477|inositol-3-phosphate synthase 1##AF207640|ISYNA1|51477|inositol-3-phosphate synthase 1##BC018952|ISYNA1|51477|inositol-3-phosphate synthase 1##AF086921|ISYNA1|51477|inositol-3-phosphate synthase 1##BC066902|ISYNA1|51477|inositol-3-phosphate synthase 1##AF220530|ISYNA1|51477|inositol-3-phosphate synthase 1##AK021526|ISYNA1|51477|inositol-3-phosphate synthase 1##AL137749|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001253389|ISYNA1|51477|inositol-3-phosphate synthase 1##AB208794|ELL|8178|elongation factor RNA polymerase II##AK293105|ELL|8178|elongation factor RNA polymerase II##AK225481|ELL|8178|elongation factor RNA polymerase II##U16282|ELL|8178|elongation factor RNA polymerase II##BC049195|ELL|8178|elongation factor RNA polymerase II##NM_006532|ELL|8178|elongation factor RNA polymerase II##AK300571|FKBP8|23770|FK506 binding protein 8, 38kDa	0.994942	CTCF.p2:-2:0.995
chr20	44591739	44591844	reg1022179.p1	6.455	+	TSC_hg19_v1_chr20_-_44563695 AK097925	-28097	-	TSC_hg19_v1_chr20_-_44563589 BC133006 BC133008	-28190	-	TSC_hg19_v1_chr20_+_44563323 NM_022104 AK299435 AB050014 AK056553 BC010005 BC013365	-28445	+	TSC_hg19_v1_chr20_-_44600828 AF395833 BC041331 BC142981 NM_022095	9019	-	TSC_hg19_v1_chr20_-_44600992 AK296989	9202	-	TSC_hg19_v1_chr20_+_44637546 AK298246 AK301446 AK311648 AK313137 AK316145 J05070 NM_004994 AK303080 BC006093 DQ896791 EU176415 AB528343 CU675241	45761	+	AK097925|FLJ40606|643549|uncharacterized LOC643549##BC133006|FLJ40606|643549|uncharacterized LOC643549##BC133008|FLJ40606|643549|uncharacterized LOC643549##NM_022104|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AK299435|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AB050014|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AK056553|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##BC010005|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##BC013365|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AF395833|ZNF335|63925|zinc finger protein 335##BC041331|ZNF335|63925|zinc finger protein 335##BC142981|ZNF335|63925|zinc finger protein 335##NM_022095|ZNF335|63925|zinc finger protein 335##AK296989|ZNF335|63925|zinc finger protein 335##AK298246|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK301446|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK313137|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK316145|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##J05070|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##NM_004994|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK303080|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##BC006093|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##DQ896791|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##EU176415|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)	0.999246	CTCF.p2:-1:0.999
chr3	196172360	196172464	reg1019762.p1	6.455	+	TSC_hg19_v1_chr3_-_196159304 NM_015562	-13079	-	TSC_hg19_v1_chr3_-_196159299 AK026451 AK129880 AK303630 AK308699 AK307899	-13113	-	AB018337 TSC_hg19_v1_chr3_-_196159295 BC047420	-13129	-	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	58166	-	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	69801	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	122978	-	NM_015562|UBXN7|26043|UBX domain protein 7##AK026451|UBXN7|26043|UBX domain protein 7##AK129880|UBXN7|26043|UBX domain protein 7##AK303630|UBXN7|26043|UBX domain protein 7##AK308699|UBXN7|26043|UBX domain protein 7##AK307899|UBXN7|26043|UBX domain protein 7##AB018337|UBXN7|26043|UBX domain protein 7##BC047420|UBXN7|26043|UBX domain protein 7##BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53	0.587381	CTCF.p2:41:0.587
chr10	134650539	134650691	reg1021832.p1	6.454	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	-51109	-	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	-299303	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-391932	+	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	105423	-	NM_001083909 TSC_hg19_v1_chr10_+_134901429 AK124728	250842	+	TSC_hg19_v1_chr10_+_134973945 NM_152643 AK090457	323356	+	BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40##NM_001083909|GPR123|84435|G protein-coupled receptor 123##AK124728|GPR123|84435|G protein-coupled receptor 123##NM_152643|KNDC1|85442|kinase non-catalytic C-lobe domain (KIND) containing 1##AK090457|KNDC1|85442|kinase non-catalytic C-lobe domain (KIND) containing 1	0.999895	CTCF.p2:-14:1.000
chr13	61047844	61047943	reg1020773.p1	6.454	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-76414	+	BX537910 NM_001146071 NM_030794	-77303	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-309792	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	941360	-	AK289924 NM_022843	941761	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	6756611	-	EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9	1.906239	CTCF.p2:3:0.957	CTCF.p2:36:0.949
chr5	169128945	169129120	reg1022565.p1	6.454	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-64732	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-64788	+	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	-118311	+	AK055998 NM_001129891	278711	-	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	403939	+	BC030767 NM_001102609 BC092511	530964	+	D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58	0.844101	CTCF.p2:-20:0.844
chr17	30462704	30462831	reg1023033.p2	6.453	+	AY386261 AK302740 BC117373 BC143578 BC143581 AK310287 NM_052888 HQ258530 AJ314647	-114674	+	AB385289 TSC_hg19_v1_chr17_+_30264319	-198473	+	TSC_hg19_v1_chr17_+_30264164 BC015704	-198604	+	TSC_hg19_v1_chr17_+_30469463 BC060781 NM_001033566 NM_001033568 NM_018307 AJ496730	6661	+	TSC_hg19_v1_chr17_+_30469520 BC041114	6755	+	TSC_hg19_v1_chr17_+_30469544 BC110895	6778	+	AY386261|LRRC37B|114659|leucine rich repeat containing 37B##AK302740|LRRC37B|114659|leucine rich repeat containing 37B##BC117373|LRRC37B|114659|leucine rich repeat containing 37B##BC143578|LRRC37B|114659|leucine rich repeat containing 37B##BC143581|LRRC37B|114659|leucine rich repeat containing 37B##AK310287|LRRC37B|114659|leucine rich repeat containing 37B##NM_052888|LRRC37B|114659|leucine rich repeat containing 37B##HQ258530|LRRC37B|114659|leucine rich repeat containing 37B##AJ314647|LRRC37B|114659|leucine rich repeat containing 37B##BC015704|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)##BC060781|RHOT1|55288|ras homolog gene family, member T1##NM_001033566|RHOT1|55288|ras homolog gene family, member T1##NM_001033568|RHOT1|55288|ras homolog gene family, member T1##NM_018307|RHOT1|55288|ras homolog gene family, member T1##AJ496730|RHOT1|55288|ras homolog gene family, member T1##BC041114|RHOT1|55288|ras homolog gene family, member T1##BC110895|RHOT1|55288|ras homolog gene family, member T1	0.830068	CTCF.p2:9:0.830
chr9	22244784	22244922	reg1022591.p2	6.452	+	TSC_hg19_v1_chr9_+_22113543 BC038540	-131244	+	AF004819 U17075 L36844 BC014469 TSC_hg19_v1_chr9_-_22009305 NM_004936 NM_078487	-235563	-	TSC_hg19_v1_chr9_-_21994420 AB464504 S78535 NM_058195 U38945	-250402	-	TSC_hg19_v1_chr9_+_22446846 AK096011 NM_022160 BC130435 BC130437	201984	+	AB464510 TSC_hg19_v1_chr9_+_22447162	202260	+	AJ290954 TSC_hg19_v1_chr9_+_22447458 AK130018	202596	+	BC038540|CDKN2B-AS|100048912|CDKN2B antisense RNA (non-protein coding)##AF004819|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##U17075|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##L36844|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##BC014469|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##NM_004936|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##NM_078487|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##S78535|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_058195|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##U38945|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##AK096011|DMRTA1|63951|DMRT-like family A1##NM_022160|DMRTA1|63951|DMRT-like family A1##BC130435|DMRTA1|63951|DMRT-like family A1##BC130437|DMRTA1|63951|DMRT-like family A1##AJ290954|DMRTA1|63951|DMRT-like family A1##AK130018|DMRTA1|63951|DMRT-like family A1	0.952681	CTCF.p2:7:0.953
chr1	64041080	64041216	reg1020711.p1	6.451	+	AK292220 NM_032437 AK092219 TSC_hg19_v1_chr1_+_63989242 AK315850 AB058702 BC015814	-52009	+	AK309622 AF175306 BC009929 TSC_hg19_v1_chr1_-_63988878 BC014385 AK312944 NM_001206739 NM_014288	-52267	-	AK022700 TSC_hg19_v1_chr1_+_63833329 BC001253 AF102851	-207818	+	TSC_hg19_v1_chr1_+_64059081 AK294186 BC019920 NM_002633 BC001756 BC067763 AK312254 M83088 BC090856 DQ890618 DQ893786 CU676478 BT006961	17877	+	AK293298 NM_001172819 AK298505	18366	+	NM_001172818 AK300100	47745	+	AK292220|EFCAB7|84455|EF-hand calcium binding domain 7##NM_032437|EFCAB7|84455|EF-hand calcium binding domain 7##AK092219|EFCAB7|84455|EF-hand calcium binding domain 7##AK315850|EFCAB7|84455|EF-hand calcium binding domain 7##AB058702|EFCAB7|84455|EF-hand calcium binding domain 7##BC015814|EFCAB7|84455|EF-hand calcium binding domain 7##AK309622|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AF175306|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##BC009929|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##BC014385|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AK312944|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##NM_001206739|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##NM_014288|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AK294186|PGM1|5236|phosphoglucomutase 1##BC019920|PGM1|5236|phosphoglucomutase 1##NM_002633|PGM1|5236|phosphoglucomutase 1##BC001756|PGM1|5236|phosphoglucomutase 1##BC067763|PGM1|5236|phosphoglucomutase 1##AK312254|PGM1|5236|phosphoglucomutase 1##M83088|PGM1|5236|phosphoglucomutase 1##BC090856|PGM1|5236|phosphoglucomutase 1##DQ890618|PGM1|5236|phosphoglucomutase 1##DQ893786|PGM1|5236|phosphoglucomutase 1##BT006961|PGM1|5236|phosphoglucomutase 1##AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1	0.957757	CTCF.p2:-29:0.958
chr16	49034590	49034696	reg1022254.p2	6.451	+	BC051897 TSC_hg19_v1_chr16_-_48644092 AB014515 BC152472 NM_153029	-390527	-	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	-615391	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	-634852	-	AB527638 TSC_hg19_v1_chr16_-_49315397	280750	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	280857	-	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	281091	-	BC051897|N4BP1|9683|NEDD4 binding protein 1##AB014515|N4BP1|9683|NEDD4 binding protein 1##BC152472|N4BP1|9683|NEDD4 binding protein 1##NM_153029|N4BP1|9683|NEDD4 binding protein 1##BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor	0.984317	CTCF.p2:-6:0.984
chr10	17291898	17292006	reg1022280.p2	6.450	+	TSC_hg19_v1_chr10_-_17271978 BC078172	-19966	-	TSC_hg19_v1_chr10_+_17271962 AK093924	-19973	+	TSC_hg19_v1_chr10_+_17271887 M25246	-20064	+	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	204262	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	204413	-	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	367421	-	AK093924|VIM|7431|vimentin##M25246|VIM|7431|vimentin##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A	0.015124	
chr18	22180176	22180273	reg1020734.p1	6.450	+	AF312230 BC069136 NM_001143828 NM_001160166 NM_021624 AB045370 BC112348 AB044934 AF307973 AF325356 AF329449 AJ298292 AY008280 AY136745 DQ835186 DQ835187	-139582	+	TSC_hg19_v1_chr18_+_22006671 AK312727 BC034016 AB026264 AB587563 CU689806 DQ893141 EU176771 AF208694	-173559	+	TSC_hg19_v1_chr18_+_22006608 AK292533 NM_018439 BC036074	-173617	+	TSC_hg19_v1_chr18_-_22931121 AB385259	750924	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	751813	-	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	751939	-	AF312230|HRH4|59340|histamine receptor H4##BC069136|HRH4|59340|histamine receptor H4##NM_001143828|HRH4|59340|histamine receptor H4##NM_001160166|HRH4|59340|histamine receptor H4##NM_021624|HRH4|59340|histamine receptor H4##AB045370|HRH4|59340|histamine receptor H4##BC112348|HRH4|59340|histamine receptor H4##AB044934|HRH4|59340|histamine receptor H4##AF307973|HRH4|59340|histamine receptor H4##AF325356|HRH4|59340|histamine receptor H4##AF329449|HRH4|59340|histamine receptor H4##AJ298292|HRH4|59340|histamine receptor H4##AY008280|HRH4|59340|histamine receptor H4##AY136745|HRH4|59340|histamine receptor H4##DQ835186|HRH4|59340|histamine receptor H4##DQ835187|HRH4|59340|histamine receptor H4##AK312727|IMPACT|55364|Impact homolog (mouse)##BC034016|IMPACT|55364|Impact homolog (mouse)##AB026264|IMPACT|55364|Impact homolog (mouse)##DQ893141|IMPACT|55364|Impact homolog (mouse)##EU176771|IMPACT|55364|Impact homolog (mouse)##AF208694|IMPACT|55364|Impact homolog (mouse)##AK292533|IMPACT|55364|Impact homolog (mouse)##NM_018439|IMPACT|55364|Impact homolog (mouse)##BC036074|IMPACT|55364|Impact homolog (mouse)##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521	0.072101	
chr2	111966632	111966813	reg1017157.p1	6.450	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-88235	+	AK300513 NM_001142807 BC022268	-476543	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-530900	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	674904	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	675039	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	689463	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.0	
chr2	89542953	89543055	reg1023016.p2	6.450	+	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-29771	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-100415	-	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	-250591	-	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	76849	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	534750	+	TSC_hg19_v1_chr2_+_90211706 Z69013	668714	+	BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC070334|IGKC|3514|immunoglobulin kappa constant	0.990748	CTCF.p2:-23:0.991
chr3	33758390	33758494	reg1019599.p1	6.450	+	NM_001207044 AJ288058	-57441	-	AB385365 AB014527 TSC_hg19_v1_chr3_-_33700598	-57896	-	TSC_hg19_v1_chr3_-_33481898 AK293100 NM_001128161	-276542	-	BC140778 TSC_hg19_v1_chr3_-_33759667	1162	-	TSC_hg19_v1_chr3_-_33759706 NM_015097	1253	-	TSC_hg19_v1_chr3_-_33759747 AK091451 AX746992	1353	-	NM_001207044|CLASP2|23122|cytoplasmic linker associated protein 2##AB014527|CLASP2|23122|cytoplasmic linker associated protein 2##AK293100|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_001128161|UBP1|7342|upstream binding protein 1 (LBP-1a)##BC140778|CLASP2|23122|cytoplasmic linker associated protein 2##NM_015097|CLASP2|23122|cytoplasmic linker associated protein 2##AK091451|CLASP2|23122|cytoplasmic linker associated protein 2	0.0	
chr8	111844756	111844868	reg1021546.p1	6.450	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-857846	-	NM_001099743 NM_001099744	-1140793	-	AK290469 NM_001099745 NM_001099746	-1151579	-	AB114605 NM_198124	2544569	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	2604317	-	TSC_hg19_v1_chr8_-_116680208 AK304046	4835408	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.287596	CTCF.p2:5:0.288
chr10	83910021	83910114	reg1020703.p2	6.449	+	DQ857894 NM_001165973	-272625	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-274985	+	AK123978 NM_001145719	-1609493	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	1989190	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	2021725	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	2023492	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.038461	
chr14	94471801	94471948	reg1023779.p1	6.449	+	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	-28798	-	AK303686 TSC_hg19_v1_chr14_-_94442905	-28966	-	AB056723 NM_016150	-48108	-	TSC_hg19_v1_chr14_+_94492685 BC009615 BC068058 NM_023112	20829	+	AK025569 TSC_hg19_v1_chr14_+_94492747	20874	+	AB209382 AF161446 AK294613 TSC_hg19_v1_chr14_-_94547557 BC096826 AL136886 BC008847 BC009406 BX537533 AK296726 AK297232 AK304504 AK025162 AF214731 NM_020414	75652	-	AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##AK025569|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##AB209382|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AF161446|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK294613|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC096826|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AL136886|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC008847|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC009406|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BX537533|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK296726|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK297232|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK304504|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK025162|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AF214731|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##NM_020414|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24	0.039875	
chr2	88486760	88486836	reg1024048.p1	6.449	+	NM_018271 BC050699 BC035315 AK001778	-14042	+	NM_001244676 NM_001244678 AK289486 AK315831 BC064423	-16934	+	CR542090 AB527938 M10617 BC032801 M10050 TSC_hg19_v1_chr2_-_88427582 BC022287 NM_001443	-59206	-	NM_001135649	265254	-	AK058098 NM_152670 BC029522	337386	+	AF110146 BC126354 BC126356 AK128659 TSC_hg19_v1_chr2_-_88926983 AK315287 AF193339 NM_004836	440180	-	NM_018271|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC050699|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC035315|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK001778|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001244676|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001244678|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK289486|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK315831|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC064423|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##CR542090|FABP1|2168|fatty acid binding protein 1, liver##M10617|FABP1|2168|fatty acid binding protein 1, liver##BC032801|FABP1|2168|fatty acid binding protein 1, liver##M10050|FABP1|2168|fatty acid binding protein 1, liver##BC022287|FABP1|2168|fatty acid binding protein 1, liver##NM_001443|FABP1|2168|fatty acid binding protein 1, liver##NM_001135649|FOXI3|344167|forkhead box I3##AK058098|C2orf51|200523|chromosome 2 open reading frame 51##NM_152670|C2orf51|200523|chromosome 2 open reading frame 51##BC029522|C2orf51|200523|chromosome 2 open reading frame 51##AF110146|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126354|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126356|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK128659|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK315287|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AF193339|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##NM_004836|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3	0.959753	CTCF.p2:8:0.960
chr4	166277223	166277361	reg1022973.p1	6.449	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-28437	+	NM_001161521 NM_001161522 AK294103 BX647776	-146114	+	TSC_hg19_v1_chr4_+_166128825 BC036468 AF059569 AK315372 DQ893638 DQ895588 CU690356	-148367	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	22865	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	517162	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	1878319	-	NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BC036468|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AF059569|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AK315372|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##DQ893638|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##DQ895588|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.98197	CTCF.p2:-8:0.982
chr8	70025367	70025479	reg1020319.p2	6.448	+	BC041961 NM_001195639 NM_052958	-782467	+	AK294299 TSC_hg19_v1_chr8_+_68864738	-1160693	+	TSC_hg19_v1_chr8_+_68864614 AY570973	-1160790	+	AK095341 NM_001128204 NM_015170 TSC_hg19_v1_chr8_+_70378858 AF545571	353442	+	TSC_hg19_v1_chr8_+_70379077 AK307951	353657	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	379616	+	BC041961|C8orf34|116328|chromosome 8 open reading frame 34##NM_001195639|C8orf34|116328|chromosome 8 open reading frame 34##NM_052958|C8orf34|116328|chromosome 8 open reading frame 34##AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AK095341|SULF1|23213|sulfatase 1##NM_001128204|SULF1|23213|sulfatase 1##NM_015170|SULF1|23213|sulfatase 1##AF545571|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1	0.575438	CTCF.p2:-4:0.561
chrX	96025460	96025596	reg1024264.p1	6.448	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	-85574	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	-85777	+	NM_001171109 NM_001171110 NM_001171111 NM_173698	-3096517	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	113442	+	EF676096 NM_001105243 NM_001184880 NM_020766 TSC_hg19_v1_chrX_-_99665272	3639745	-	NM_022144 AF191770 BC034030 AF291656 AF234259 AY358706 AB055421 AB590911 CU689814	3814373	+	BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_001171109|FAM133A|286499|family with sequence similarity 133, member A##NM_001171110|FAM133A|286499|family with sequence similarity 133, member A##NM_001171111|FAM133A|286499|family with sequence similarity 133, member A##NM_173698|FAM133A|286499|family with sequence similarity 133, member A##NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa##EF676096|PCDH19|57526|protocadherin 19##NM_001105243|PCDH19|57526|protocadherin 19##NM_001184880|PCDH19|57526|protocadherin 19##NM_020766|PCDH19|57526|protocadherin 19##NM_022144|TNMD|64102|tenomodulin##AF191770|TNMD|64102|tenomodulin##BC034030|TNMD|64102|tenomodulin##AF291656|TNMD|64102|tenomodulin##AF234259|TNMD|64102|tenomodulin##AY358706|TNMD|64102|tenomodulin##AB055421|TNMD|64102|tenomodulin	0.659619	CTCF.p2:-13:0.660
chr14	36414206	36414307	reg1018873.p2	6.447	+	TSC_hg19_v1_chr14_+_36295599 NM_032352 AY827074 BC006250 AK297106 AK310359 AK315424	-118653	+	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	-135861	-	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	-136109	-	AB463855 CU677729 BX248287 TSC_hg19_v1_chr14_-_36789806 AF208857 BC016821 AK293473 BC005197 AB038523 AK315290 NM_001144891 NM_016586	375588	-	TSC_hg19_v1_chr14_-_36982983 BC042093 NM_001101341	568726	-	NM_003317 U33749	574646	-	NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BX248287|MBIP|51562|MAP3K12 binding inhibitory protein 1##AF208857|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC016821|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK293473|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC005197|MBIP|51562|MAP3K12 binding inhibitory protein 1##AB038523|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK315290|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_001144891|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_016586|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC042093|SFTA3|253970|surfactant associated 3##NM_001101341|SFTA3|253970|surfactant associated 3##NM_003317|NKX2-1|7080|NK2 homeobox 1##U33749|NKX2-1|7080|NK2 homeobox 1	0.377543	CTCF.p2:-1:0.378
chr15	40994396	40994554	reg1020892.p1	6.447	+	TSC_hg19_v1_chr15_+_40987387 D14134 D13804	-7059	+	EU362635 NM_001164270 NM_002875 NM_133487 TSC_hg19_v1_chr15_+_40987377 BC001459 AK291969 AK303089 AK313503 AK131299 NM_001164269	-7124	+	TSC_hg19_v1_chr15_-_40987295 AK125393	-7180	-	BC063844 TSC_hg19_v1_chr15_-_41047430 AK097286 AK092058	52958	-	TSC_hg19_v1_chr15_-_41047453 AK001441 NM_018145 AK123192	52989	-	TSC_hg19_v1_chr15_+_41056274 AK223430 AK311872 NM_005258 BC112262 BC112264 BC143904 HQ258032	61833	+	D14134|RAD51|5888|RAD51 homolog (S. cerevisiae)##D13804|RAD51|5888|RAD51 homolog (S. cerevisiae)##EU362635|RAD51|5888|RAD51 homolog (S. cerevisiae)##NM_001164270|RAD51|5888|RAD51 homolog (S. cerevisiae)##NM_002875|RAD51|5888|RAD51 homolog (S. cerevisiae)##NM_133487|RAD51|5888|RAD51 homolog (S. cerevisiae)##BC001459|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK291969|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK303089|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK313503|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK131299|RAD51|5888|RAD51 homolog (S. cerevisiae)##NM_001164269|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK125393|LOC100505648|100505648|uncharacterized LOC100505648##BC063844|FAM82A2|55177|family with sequence similarity 82, member A2##AK097286|FAM82A2|55177|family with sequence similarity 82, member A2##AK092058|FAM82A2|55177|family with sequence similarity 82, member A2##AK001441|FAM82A2|55177|family with sequence similarity 82, member A2##NM_018145|FAM82A2|55177|family with sequence similarity 82, member A2##AK123192|FAM82A2|55177|family with sequence similarity 82, member A2##AK223430|GCHFR|2644|GTP cyclohydrolase I feedback regulator##AK311872|GCHFR|2644|GTP cyclohydrolase I feedback regulator##NM_005258|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112262|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112264|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC143904|GCHFR|2644|GTP cyclohydrolase I feedback regulator##HQ258032|GCHFR|2644|GTP cyclohydrolase I feedback regulator	0.07417	
chr11	101327674	101327768	reg1018431.p1	6.446	+	AK304853 TSC_hg19_v1_chr11_-_101000531 NM_000926	-327218	-	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	-327922	-	AK314174 AF247167 NM_032021	-464957	+	AJ006276 NM_004621	126937	-	TSC_hg19_v1_chr11_+_101785752 NM_020802 AK057230 BC036525 BC146807	458066	+	TSC_hg19_v1_chr11_+_101785949 AK309479 BX647415	458271	+	AK304853|PGR|5241|progesterone receptor##NM_000926|PGR|5241|progesterone receptor##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##AJ006276|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6##NM_004621|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6##NM_020802|KIAA1377|57562|KIAA1377##AK057230|KIAA1377|57562|KIAA1377##BC036525|KIAA1377|57562|KIAA1377##BC146807|KIAA1377|57562|KIAA1377##BX647415|KIAA1377|57562|KIAA1377	0.941743	CTCF.p2:6:0.942
chr20	23330435	23330576	reg1022054.p1	6.446	+	AB527124 AM393282 AM393752 DQ891055 DQ894234 TSC_hg19_v1_chr20_-_23066962 AJ295142 AB209895 BC028075 AK299957 NM_012072 U94333	-263572	-	TSC_hg19_v1_chr20_-_23062805 AK056764	-267693	-	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	-300267	-	BC003410 NM_013248 TSC_hg19_v1_chr20_+_23331435 AK026360 BC000759 BC003029 AF156957 BC002687	939	+	AK295362 TSC_hg19_v1_chr20_+_23342818 AK056477 AK293942 AK314599	12308	+	TSC_hg19_v1_chr20_+_23342853 AK289814	12354	+	AM393282|CD93|22918|CD93 molecule##AM393752|CD93|22918|CD93 molecule##DQ891055|CD93|22918|CD93 molecule##DQ894234|CD93|22918|CD93 molecule##AJ295142|CD93|22918|CD93 molecule##AB209895|CD93|22918|CD93 molecule##BC028075|CD93|22918|CD93 molecule##AK299957|CD93|22918|CD93 molecule##NM_012072|CD93|22918|CD93 molecule##U94333|CD93|22918|CD93 molecule##AK056764|CD93|22918|CD93 molecule##BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##BC003410|NXT1|29107|NTF2-like export factor 1##NM_013248|NXT1|29107|NTF2-like export factor 1##AK026360|NXT1|29107|NTF2-like export factor 1##BC000759|NXT1|29107|NTF2-like export factor 1##BC003029|NXT1|29107|NTF2-like export factor 1##AF156957|NXT1|29107|NTF2-like export factor 1##BC002687|NXT1|29107|NTF2-like export factor 1##AK295362|GZF1|64412|GDNF-inducible zinc finger protein 1##AK056477|GZF1|64412|GDNF-inducible zinc finger protein 1##AK293942|GZF1|64412|GDNF-inducible zinc finger protein 1##AK314599|GZF1|64412|GDNF-inducible zinc finger protein 1##AK289814|GZF1|64412|GDNF-inducible zinc finger protein 1	0.969128	CTCF.p2:-20:0.969
chr3	53231257	53231368	reg1020837.p1	6.446	+	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	-36093	+	TSC_hg19_v1_chr3_-_53164452 AJ318099 BC043595 NM_052859	-66861	-	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	-151249	-	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	58699	-	TSC_hg19_v1_chr3_-_53290099 NM_001064 NM_001135055	58802	-	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	150281	-	BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##AJ318099|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043595|RFT1|91869|RFT1 homolog (S. cerevisiae)##NM_052859|RFT1|91869|RFT1 homolog (S. cerevisiae)##AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase##NM_001064|TKT|7086|transketolase##NM_001135055|TKT|7086|transketolase##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	0.257041	CTCF.p2:21:0.257
chr7	103797355	103797475	reg1022449.p1	6.446	+	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-167419	-	TSC_hg19_v1_chr7_-_103086511 AF523354 AY256823 AY256824 AY256825 AK126898 NM_001167962 NM_198999 NM_206883 NM_206884 NM_206885	-710848	-	NM_001204453 NM_002803 TSC_hg19_v1_chr7_+_102988118 D11094 AK298821 AB075520 AK312648 AK298529 BC002589 AB527557 CU678056 EU446703	-809351	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	51016	-	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	171803	+	TSC_hg19_v1_chr7_-_104567089 BC050337	769675	-	NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##AF523354|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256823|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256824|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256825|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AK126898|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_001167962|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_198999|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206883|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206884|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206885|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_001204453|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##NM_002803|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##D11094|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK298821|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AB075520|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK312648|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK298529|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##BC002589|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##EU446703|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC050337|LOC723809|723809|uncharacterized LOC723809	0.941467	CTCF.p2:6:0.941
chr5	96237244	96237352	reg1019008.p1	6.445	+	TSC_hg19_v1_chr5_+_96212203 AK312864 AB109031 AB163917 BC065240	-25110	+	NM_001130140 NM_022350 AK074281	-25632	+	AK310535 BC030775 NM_001198541	-87473	-	TSC_hg19_v1_chr5_+_96271097 AK096804	33795	+	NM_005575 D50810	34068	+	TSC_hg19_v1_chr5_+_96271783 U62768 AK314226 BC111718 BC113117 BC028692	34496	+	AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##NM_001130140|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##NM_022350|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AK074281|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AK310535|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##BC030775|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_001198541|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AK096804|LNPEP|4012|leucyl/cystinyl aminopeptidase##NM_005575|LNPEP|4012|leucyl/cystinyl aminopeptidase##D50810|LNPEP|4012|leucyl/cystinyl aminopeptidase##U62768|LNPEP|4012|leucyl/cystinyl aminopeptidase##AK314226|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC111718|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC113117|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC028692|LNPEP|4012|leucyl/cystinyl aminopeptidase	0.067701	
chr10	93403596	93403692	reg1022386.p2	6.444	+	BX537399 NM_005398 TSC_hg19_v1_chr10_-_93392859	-10786	-	AF087874 Y18207 TSC_hg19_v1_chr10_-_93392829 AK299398 AK313149	-10830	-	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	-10883	-	AF438201 TSC_hg19_v1_chr10_+_93558136	154459	+	TSC_hg19_v1_chr10_+_93558164 AF305081 NM_025235	154508	+	AK314612 TSC_hg19_v1_chr10_+_93558182 AF309033	154545	+	BX537399|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##NM_005398|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AF087874|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##Y18207|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK299398|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK313149|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AF438201|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF305081|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##NM_025235|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AK314612|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF309033|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	0.074357	
chr12	117669605	117669756	reg1022051.p2	6.444	+	AL136899 TSC_hg19_v1_chr12_-_117628277 BC091496 AF174601 AB020682 AK001699 AK314573 BC034045 BC042333 AK308141 NM_015002 NM_033624	-41455	-	DQ894644 TSC_hg19_v1_chr12_-_117537222 AF443207 BC015221 NM_001168325 NM_017899 AK000614	-132417	-	TSC_hg19_v1_chr12_+_117348781 BC037296 NM_012174 NM_153348 AK289621 AF176707 BC075823	-320894	+	NM_001204213	73176	-	NM_001204214	77534	-	AF446136 TSC_hg19_v1_chr12_-_117799037	129341	-	AL136899|FBXO21|23014|F-box protein 21##BC091496|FBXO21|23014|F-box protein 21##AF174601|FBXO21|23014|F-box protein 21##AB020682|FBXO21|23014|F-box protein 21##AK001699|FBXO21|23014|F-box protein 21##AK314573|FBXO21|23014|F-box protein 21##BC034045|FBXO21|23014|F-box protein 21##BC042333|FBXO21|23014|F-box protein 21##AK308141|FBXO21|23014|F-box protein 21##NM_015002|FBXO21|23014|F-box protein 21##NM_033624|FBXO21|23014|F-box protein 21##DQ894644|TESC|54997|tescalcin##AF443207|TESC|54997|tescalcin##BC015221|TESC|54997|tescalcin##NM_001168325|TESC|54997|tescalcin##NM_017899|TESC|54997|tescalcin##AK000614|TESC|54997|tescalcin##BC037296|FBXW8|26259|F-box and WD repeat domain containing 8##NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8##NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8##AK289621|FBXW8|26259|F-box and WD repeat domain containing 8##AF176707|FBXW8|26259|F-box and WD repeat domain containing 8##NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446136|NOS1|4842|nitric oxide synthase 1 (neuronal)	0.978503	CTCF.p2:-4:0.979
chr22	37957858	37957972	reg1022232.p2	6.444	+	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	-1442	+	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	-42608	-	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	-75570	-	M87842 BC059782 NM_006498 CR456512	18085	-	TSC_hg19_v1_chr22_+_38004480 NM_001001560 NM_001001561 NM_001172687 NM_013365 AK075256	46647	+	TSC_hg19_v1_chr22_+_38004843 CR456493 BC010917 AK290548 BC029388 AK225157 BC044629 AF190862 AF233521 AF218584	46855	+	NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10##CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##M87842|LGALS2|3957|lectin, galactoside-binding, soluble, 2##BC059782|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_006498|LGALS2|3957|lectin, galactoside-binding, soluble, 2##CR456512|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_001001560|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001001561|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001172687|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_013365|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK075256|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CR456493|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC010917|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK290548|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC029388|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK225157|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC044629|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF190862|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF233521|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF218584|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1	0.402243	CTCF.p2:-3:0.402
chr4	96956972	96957135	reg1022971.p1	6.444	+	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	-195795	+	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	-486677	-	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	-486874	-	CU691442 BC036870 NM_174952	2107292	-	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	2225541	+	TSC_hg19_v1_chr4_-_99579781 BC009704 AF065389 AK315723 NM_005723	2622706	-	NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC009704|TSPAN5|10098|tetraspanin 5##AF065389|TSPAN5|10098|tetraspanin 5##AK315723|TSPAN5|10098|tetraspanin 5##NM_005723|TSPAN5|10098|tetraspanin 5	0.079513	
chr1	26560361	26560483	reg1020092.p1	6.443	+	BC144663 BC128138 BC128139 NM_198137	-43338	+	TSC_hg19_v1_chr1_+_26504028 AB590388 DQ892241 DQ895441 CU679980 BT006900	-56391	+	TSC_hg19_v1_chr1_+_26503979 AK296814 NM_006314 AB209335 AK222904 BC011604 BC012797 AF100153 AK001900 AK222817 AK292646 AK302056	-56426	+	TSC_hg19_v1_chr1_+_26560690 AK024038 AK299312 BC064528 NM_022778	233	+	NM_031286	45790	+	BC030135 TSC_hg19_v1_chr1_+_26606522	46062	+	BC144663|CATSPER4|378807|cation channel, sperm associated 4##BC128138|CATSPER4|378807|cation channel, sperm associated 4##BC128139|CATSPER4|378807|cation channel, sperm associated 4##NM_198137|CATSPER4|378807|cation channel, sperm associated 4##DQ892241|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##DQ895441|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##BT006900|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK296814|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##NM_006314|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AB209335|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK222904|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##BC011604|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##BC012797|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AF100153|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK001900|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK222817|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK292646|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK302056|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK024038|CEP85|64793|centrosomal protein 85kDa##AK299312|CEP85|64793|centrosomal protein 85kDa##BC064528|CEP85|64793|centrosomal protein 85kDa##NM_022778|CEP85|64793|centrosomal protein 85kDa##NM_031286|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##BC030135|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3	0.859102	CTCF.p2:16:0.859
chr13	102594521	102594634	reg1022702.p1	6.443	+	NM_004115 U66200	-25583	-	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	-489582	+	TSC_hg19_v1_chr13_-_102068838 BC028390	-525737	-	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	459498	-	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	654759	+	HQ258371 NM_001010977 BC132748 BC132750	752281	-	NM_004115|FGF14|2259|fibroblast growth factor 14##U66200|FGF14|2259|fibroblast growth factor 14##AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC028390|NALCN|259232|sodium leak channel, non-selective##BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II##HQ258371|METTL21C|196541|methyltransferase like 21C##NM_001010977|METTL21C|196541|methyltransferase like 21C##BC132748|METTL21C|196541|methyltransferase like 21C##BC132750|METTL21C|196541|methyltransferase like 21C	0.037419	
chr1	41748497	41748623	reg1007783.p1	6.443	+	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-40724	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-40775	-	BC021252 NM_001172221	-119872	-	BC034393 X55177 M65199 NM_001956	201759	-	TSC_hg19_v1_chr1_-_42384357 BC040942	635782	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	635813	-	BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC021252|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172221|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.062826	
chrX	15367312	15367427	reg1022046.p2	6.443	+	NM_002641 NM_020473 TSC_hg19_v1_chrX_-_15353680	-13679	-	AK303538 TSC_hg19_v1_chrX_-_15353667	-13701	-	AK290497 AK315063 TSC_hg19_v1_chrX_-_15353646 AK304144 D11466	-13722	-	D89630 AJ000185 AX740237 BC027948 AK313173 AK223160 NM_004469	35132	-	BC002517 TSC_hg19_v1_chrX_-_15511423 AK309656 Y07868 Y07867	144051	-	NM_001018109 NM_003662	144341	-	NM_002641|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##NM_020473|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##AK303538|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##AK290497|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##AK315063|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##AK304144|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##D11466|PIGA|5277|phosphatidylinositol glycan anchor biosynthesis, class A##D89630|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##AJ000185|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##BC027948|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##AK313173|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##AK223160|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##NM_004469|FIGF|2277|c-fos induced growth factor (vascular endothelial growth factor D)##BC002517|PIR|8544|pirin (iron-binding nuclear protein)##AK309656|PIR|8544|pirin (iron-binding nuclear protein)##Y07868|PIR|8544|pirin (iron-binding nuclear protein)##Y07867|PIR|8544|pirin (iron-binding nuclear protein)##NM_001018109|PIR|8544|pirin (iron-binding nuclear protein)##NM_003662|PIR|8544|pirin (iron-binding nuclear protein)	0.995982	CTCF.p2:-25:0.996
chr2	165286810	165286937	reg1024828.p1	6.442	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	-694356	-	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-1591626	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-1591749	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	138131	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	191020	-	TSC_hg19_v1_chr2_-_165477987 AK307744 AK313153	191120	-	BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14##AK307744|GRB14|2888|growth factor receptor-bound protein 14##AK313153|GRB14|2888|growth factor receptor-bound protein 14	0.630237	CTCF.p2:8:0.630
chr5	74561600	74561729	reg1025071.p1	6.442	+	AK097510 NM_001164443	-28962	-	AF132035 NM_016591	-234941	-	AB020695 NM_015566 AK290004	-399026	-	NM_000859 NM_001130996 TSC_hg19_v1_chr5_+_74633004	71340	+	TSC_hg19_v1_chr5_+_74633022 BC024180	71365	+	TSC_hg19_v1_chr5_+_74633061 AK299655 BC033692 AK292892	71388	+	AK097510|ANKRD31|256006|ankyrin repeat domain 31##NM_001164443|ANKRD31|256006|ankyrin repeat domain 31##AF132035|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##NM_016591|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##AB020695|FAM169A|26049|family with sequence similarity 169, member A##NM_015566|FAM169A|26049|family with sequence similarity 169, member A##AK290004|FAM169A|26049|family with sequence similarity 169, member A##NM_000859|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##NM_001130996|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##BC024180|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##AK299655|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##BC033692|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##AK292892|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase	0.445837	CTCF.p2:7:0.446
chr11	75514529	75514705	reg1000826.p2	6.441	+	TSC_hg19_v1_chr11_+_75479822 AB048286 AY780646 AY358532 AL834287 AF384161 CU677247 AY780647	-34694	+	TSC_hg19_v1_chr11_+_75479774 NM_032564 BC015234	-34840	+	AK026297 AK291998 AY157608 BC103876 BC103877 BC103878 NM_025098	-85719	+	NM_003369 TSC_hg19_v1_chr11_+_75526233 AK291011	11605	+	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	11661	+	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	402895	-	AB048286|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY358532|DGAT2|84649|diacylglycerol O-acyltransferase 2##AL834287|DGAT2|84649|diacylglycerol O-acyltransferase 2##AF384161|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY780647|DGAT2|84649|diacylglycerol O-acyltransferase 2##NM_032564|DGAT2|84649|diacylglycerol O-acyltransferase 2##BC015234|DGAT2|84649|diacylglycerol O-acyltransferase 2##AK026297|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##AK291998|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##AY157608|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103876|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103877|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103878|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##NM_025098|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##NM_003369|UVRAG|7405|UV radiation resistance associated gene##AK291011|UVRAG|7405|UV radiation resistance associated gene##BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11	0.0	
chr18	72369708	72369816	reg1022038.p1	6.441	+	NM_001146189 NM_001146190 NM_017757	-26844	+	TSC_hg19_v1_chr18_+_72265126 AK056288	-104631	+	TSC_hg19_v1_chr18_-_72265072 BC036588	-104702	-	TSC_hg19_v1_chr18_-_72920993 CU687330 CU689738	551239	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	551350	-	BC018081 NM_175907 TSC_hg19_v1_chr18_-_72921324	551543	-	NM_001146189|ZNF407|55628|zinc finger protein 407##NM_001146190|ZNF407|55628|zinc finger protein 407##NM_017757|ZNF407|55628|zinc finger protein 407##AK056288|ZNF407|55628|zinc finger protein 407##BC036588|LOC400657|400657|uncharacterized LOC400657##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	0.653337	CTCF.p2:5:0.653
chr8	61523688	61523799	reg1022700.p2	6.441	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-93993	+	TSC_hg19_v1_chr8_+_61429570 X12953 BC008929	-94179	+	TSC_hg19_v1_chr8_+_61429545 AK312344	-94197	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	67545	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	67659	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	676807	+	M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##X12953|RAB2A|5862|RAB2A, member RAS oncogene family##BC008929|RAB2A|5862|RAB2A, member RAS oncogene family##AK312344|RAB2A|5862|RAB2A, member RAS oncogene family##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1	0.635365	CTCF.p2:16:0.605
chr9	15232147	15232276	reg1022622.p2	6.441	+	BX537574 NM_144966	-321219	-	AB160987 TSC_hg19_v1_chr9_-_14869016	-363212	-	BC031064 NM_001177704	-452681	-	AK301427 NM_001168342	17944	-	TSC_hg19_v1_chr9_-_15307215 BC070139 AK301185 AK298581 AK091187 AX746836	74989	-	TSC_hg19_v1_chr9_-_15307325 AK298998 BC142985 AK310482 NM_001168339 NM_001168340 NM_001168341 NM_152574	75133	-	BX537574|FREM1|158326|FRAS1 related extracellular matrix 1##NM_144966|FREM1|158326|FRAS1 related extracellular matrix 1##AB160987|FREM1|158326|FRAS1 related extracellular matrix 1##BC031064|FREM1|158326|FRAS1 related extracellular matrix 1##NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1##AK301427|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168342|TTC39B|158219|tetratricopeptide repeat domain 39B##BC070139|TTC39B|158219|tetratricopeptide repeat domain 39B##AK301185|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298581|TTC39B|158219|tetratricopeptide repeat domain 39B##AK091187|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298998|TTC39B|158219|tetratricopeptide repeat domain 39B##BC142985|TTC39B|158219|tetratricopeptide repeat domain 39B##AK310482|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168339|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168340|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168341|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_152574|TTC39B|158219|tetratricopeptide repeat domain 39B	0.64173	CTCF.p2:11:0.642
chr10	84571507	84571617	reg1020508.p1	6.440	+	DQ857894 NM_001165973	-934120	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-936480	+	AK123978 NM_001145719	-2270988	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	1327695	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	1360230	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	1361997	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.90844	CTCF.p2:9:0.908
chr16	71571710	71571837	reg1021191.p1	6.440	+	NM_005769 AF131235 NM_001166395 AK026635 AK074746	-11680	+	AK292260 BC030658 AK057330 BC047091 NM_006961	-48558	-	AK123826 TSC_hg19_v1_chr16_+_71496196	-75585	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	39199	-	BC005052 NM_001017967 NM_052858 AK307585 BC011893 BC013376 AK056842 AK292185 CU680584	88324	+	AB463166 AM393067 AM393542 BC129927 BC129983 NM_015020	176927	-	NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19##X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase##BC005052|MARVELD3|91862|MARVEL domain containing 3##NM_001017967|MARVELD3|91862|MARVEL domain containing 3##NM_052858|MARVELD3|91862|MARVEL domain containing 3##AK307585|MARVELD3|91862|MARVEL domain containing 3##BC011893|MARVELD3|91862|MARVEL domain containing 3##BC013376|MARVELD3|91862|MARVEL domain containing 3##AK056842|MARVELD3|91862|MARVEL domain containing 3##AK292185|MARVELD3|91862|MARVEL domain containing 3##AM393067|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AM393542|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129927|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129983|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##NM_015020|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2	0.994851	CTCF.p2:-4:0.995
chr16	81856823	81856934	reg1023172.p1	6.440	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-43948	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-43976	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	-43981	+	BC019670 AK315652 AK026740 NM_145168	188190	-	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	211983	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	212054	+	BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.0	
chr5	2038872	2038962	reg1013459.p2	6.440	+	AB527533 BC110912 BC144204 BC136505 BC136506 AF124733 NM_016358	-156096	-	TSC_hg19_v1_chr5_+_1801520 NM_004553 AK022503 BC038664 AF044959 BC046155 CR456880 HQ257915	-237405	+	TSC_hg19_v1_chr5_-_1799952 AK312001 BC104652 EF036487 NM_032479	-238945	-	AB188492 NM_001134222 NM_033267 BC065189	712854	-	AY249325 NM_178569 BC101608 BC101634 BC143638 BC143639 BC143640 BC171731	713384	+	AY335938 NM_024337	1557250	+	BC110912|IRX4|50805|iroquois homeobox 4##BC144204|IRX4|50805|iroquois homeobox 4##BC136505|IRX4|50805|iroquois homeobox 4##BC136506|IRX4|50805|iroquois homeobox 4##AF124733|IRX4|50805|iroquois homeobox 4##NM_016358|IRX4|50805|iroquois homeobox 4##NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK312001|MRPL36|64979|mitochondrial ribosomal protein L36##BC104652|MRPL36|64979|mitochondrial ribosomal protein L36##EF036487|MRPL36|64979|mitochondrial ribosomal protein L36##NM_032479|MRPL36|64979|mitochondrial ribosomal protein L36##AB188492|IRX2|153572|iroquois homeobox 2##NM_001134222|IRX2|153572|iroquois homeobox 2##NM_033267|IRX2|153572|iroquois homeobox 2##BC065189|IRX2|153572|iroquois homeobox 2##AY249325|C5orf38|153571|chromosome 5 open reading frame 38##NM_178569|C5orf38|153571|chromosome 5 open reading frame 38##BC101608|C5orf38|153571|chromosome 5 open reading frame 38##BC101634|C5orf38|153571|chromosome 5 open reading frame 38##BC143638|C5orf38|153571|chromosome 5 open reading frame 38##BC143639|C5orf38|153571|chromosome 5 open reading frame 38##BC143640|C5orf38|153571|chromosome 5 open reading frame 38##BC171731|C5orf38|153571|chromosome 5 open reading frame 38##AY335938|IRX1|79192|iroquois homeobox 1##NM_024337|IRX1|79192|iroquois homeobox 1	0.999482	CTCF.p2:12:0.999
chr12	131937266	131937381	reg1021457.p1	6.439	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-498870	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-580612	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-580698	+	TSC_hg19_v1_chr12_+_132195623 BC142980	258290	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	258333	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	375643	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.012873	
chr20	56197665	56197798	reg1022487.p1	6.439	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	-2193	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	-61574	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	-97530	-	TSC_hg19_v1_chr20_-_56285017 AF305616 AX775889 NM_020182	87258	-	TSC_hg19_v1_chr20_+_56285236 AK056098	87494	+	TSC_hg19_v1_chr20_-_56285634 BC080635 AF224278 AY128643 NM_199169 NM_199170 AX775887 AK296199	87891	-	BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##BC080635|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AF224278|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AY128643|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199169|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199170|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK296199|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	0.597825	CTCF.p2:-4:0.598
chr6	136904301	136904410	reg1021342.p1	6.439	+	NM_001198616 NM_001198617 NM_003980	-32399	-	TSC_hg19_v1_chr6_-_136871561 AJ242501 AJ242502 CU693064 AB384694 DQ890946 DQ896812 BC025777 AK312789 X73882	-32734	-	AK296483 AK311270 NM_001198614 NM_001198618 TSC_hg19_v1_chr6_-_136847745 AK311114 AK311236 AK316062 NM_001198619 AK311234	-56558	-	TSC_hg19_v1_chr6_-_137113169 AB384845	208875	-	TSC_hg19_v1_chr6_-_137113545 AK310942 D84476	209193	-	BC054503 TSC_hg19_v1_chr6_-_137113611	209255	-	NM_001198616|MAP7|9053|microtubule-associated protein 7##NM_001198617|MAP7|9053|microtubule-associated protein 7##NM_003980|MAP7|9053|microtubule-associated protein 7##AJ242501|MAP7|9053|microtubule-associated protein 7##AJ242502|MAP7|9053|microtubule-associated protein 7##DQ890946|MAP7|9053|microtubule-associated protein 7##DQ896812|MAP7|9053|microtubule-associated protein 7##BC025777|MAP7|9053|microtubule-associated protein 7##AK312789|MAP7|9053|microtubule-associated protein 7##X73882|MAP7|9053|microtubule-associated protein 7##AK296483|MAP7|9053|microtubule-associated protein 7##AK311270|MAP7|9053|microtubule-associated protein 7##NM_001198614|MAP7|9053|microtubule-associated protein 7##NM_001198618|MAP7|9053|microtubule-associated protein 7##AK311114|MAP7|9053|microtubule-associated protein 7##AK311236|MAP7|9053|microtubule-associated protein 7##AK316062|MAP7|9053|microtubule-associated protein 7##NM_001198619|MAP7|9053|microtubule-associated protein 7##AK311234|MAP7|9053|microtubule-associated protein 7##AK310942|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##D84476|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##BC054503|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5	0.968712	CTCF.p2:-23:0.969
chr8	52722941	52723062	reg1021898.p1	6.439	+	EU170240 AY877349 NM_144651	-1048	-	AJ003030 NM_018967	-1898405	+	NM_001007176 BC017981 AJ276240	-2738092	+	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	88601	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	88726	-	AK299452 TSC_hg19_v1_chr8_+_52812239	89222	+	EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.983743	CTCF.p2:26:0.984
chr10	46856083	46856185	reg1022112.p1	6.438	+	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-215113	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	-215446	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	-236138	-	BC139914 AK290186 TSC_hg19_v1_chr10_-_46970538	114376	-	TSC_hg19_v1_chr10_-_46970597 AK131036 AK293632 NM_031912 NM_181519	114466	-	BC011672 NM_014696	137411	+	BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##BC139914|SYT15|83849|synaptotagmin XV##AK290186|SYT15|83849|synaptotagmin XV##AK131036|SYT15|83849|synaptotagmin XV##AK293632|SYT15|83849|synaptotagmin XV##NM_031912|SYT15|83849|synaptotagmin XV##NM_181519|SYT15|83849|synaptotagmin XV##BC011672|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##NM_014696|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2	0.58499	CTCF.p2:4:0.585
chr7	137311360	137311470	reg1021341.p2	6.438	+	BC005916 TSC_hg19_v1_chr7_-_137028543 NM_002825 M57399	-282860	-	X52946 TSC_hg19_v1_chr7_-_137028443 AK313424	-282974	-	TSC_hg19_v1_chr7_-_137028371 AK290488	-283042	-	TSC_hg19_v1_chr7_-_137531587 NM_004717	220181	-	TSC_hg19_v1_chr7_+_137531690 BC047556	220317	+	TSC_hg19_v1_chr7_-_137620668 BC015585	309247	-	BC005916|PTN|5764|pleiotrophin##NM_002825|PTN|5764|pleiotrophin##M57399|PTN|5764|pleiotrophin##X52946|PTN|5764|pleiotrophin##AK313424|PTN|5764|pleiotrophin##AK290488|PTN|5764|pleiotrophin##NM_004717|DGKI|9162|diacylglycerol kinase, iota##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.950367	CTCF.p2:-2:0.950
chr16	5540692	5540821	reg1022230.p1	6.437	+	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	-392988	-	NM_019109 TSC_hg19_v1_chr16_+_5121825 AK075373 BC031095 AB019038 BC004402 AK311475 CU678708 DQ895010 EU176309	-418926	+	TSC_hg19_v1_chr16_-_5116030 BC033681 AY358483 NM_001098514 NM_152459	-424669	-	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	528469	+	TSC_hg19_v1_chr16_+_6533765 BC033885	993019	+	AK001027 NM_001142334	1283053	+	BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##NM_019109|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK075373|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC031095|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AB019038|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC004402|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK311475|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##DQ895010|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##EU176309|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC033681|C16orf89|146556|chromosome 16 open reading frame 89##AY358483|C16orf89|146556|chromosome 16 open reading frame 89##NM_001098514|C16orf89|146556|chromosome 16 open reading frame 89##NM_152459|C16orf89|146556|chromosome 16 open reading frame 89##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	0.988286	CTCF.p2:10:0.988
chr22	38361321	38361414	reg1019378.p1	6.436	+	TSC_hg19_v1_chr22_+_38349705 NM_021974 BC003582 AK094034 AK311128 AK311831 AX748424 CR456546 CU013146 CU013434 AB463187 CR457021	-11635	+	CR456440 BC031998 AK057349 NM_032561 NM_001207062	-11763	-	TSC_hg19_v1_chr22_+_38302345 AJ496196 CR456437 AB463117 BC142605 BC143050 CU013036 CU013324 AL834373	-58969	+	BT020029 CR536571 AB489148 CU013183 CU013471 CU678224 DQ893172 DQ896471 TSC_hg19_v1_chr22_-_38379842	18455	-	CR456584 TSC_hg19_v1_chr22_-_38379898 BC002824	18532	-	BC007595 NM_006941 TSC_hg19_v1_chr22_-_38380551 AK310896 AK300945	19186	-	NM_021974|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##BC003582|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK094034|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK311128|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK311831|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CR456546|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CU013146|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CU013434|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CR457021|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CR456440|C22orf23|84645|chromosome 22 open reading frame 23##BC031998|C22orf23|84645|chromosome 22 open reading frame 23##AK057349|C22orf23|84645|chromosome 22 open reading frame 23##NM_032561|C22orf23|84645|chromosome 22 open reading frame 23##NM_001207062|C22orf23|84645|chromosome 22 open reading frame 23##AJ496196|MICALL1|85377|MICAL-like 1##CR456437|MICALL1|85377|MICAL-like 1##BC142605|MICALL1|85377|MICAL-like 1##BC143050|MICALL1|85377|MICAL-like 1##AL834373|MICALL1|85377|MICAL-like 1##BT020029|SOX10|6663|SRY (sex determining region Y)-box 10##CR536571|SOX10|6663|SRY (sex determining region Y)-box 10##CU013183|SOX10|6663|SRY (sex determining region Y)-box 10##CU013471|SOX10|6663|SRY (sex determining region Y)-box 10##DQ893172|SOX10|6663|SRY (sex determining region Y)-box 10##DQ896471|SOX10|6663|SRY (sex determining region Y)-box 10##CR456584|SOX10|6663|SRY (sex determining region Y)-box 10##BC002824|SOX10|6663|SRY (sex determining region Y)-box 10##BC007595|SOX10|6663|SRY (sex determining region Y)-box 10##NM_006941|SOX10|6663|SRY (sex determining region Y)-box 10##AK300945|SOX10|6663|SRY (sex determining region Y)-box 10	0.997649	CTCF.p2:7:0.998
chr5	180810227	180810321	reg1022178.p1	6.436	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-15997	+	TSC_hg19_v1_chr5_+_180688213 BC016291	-122047	+	AK054802 TSC_hg19_v1_chr5_-_180688115 BC007372 NM_032765 AB209243	-122149	-	None	None	None	None	None	None	None	None	None	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##AK054802|TRIM52|84851|tripartite motif containing 52##BC007372|TRIM52|84851|tripartite motif containing 52##NM_032765|TRIM52|84851|tripartite motif containing 52##AB209243|TRIM52|84851|tripartite motif containing 52	0.26573	CTCF.p2:-23:0.266
chr9	126899762	126899943	reg1018156.p1	6.436	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-125781	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-125969	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-207541	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	120158	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	120393	+	TSC_hg19_v1_chr9_+_127020255 AB026289	120412	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.160182	
chr10	63493233	63493361	reg1021286.p1	6.435	+	BC041932 NM_173554	-70579	+	CR749606 NM_178505	-280090	-	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	-280338	-	NM_032199	167715	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	168134	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	315799	+	BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##CR749606|TMEM26|219623|transmembrane protein 26##NM_178505|TMEM26|219623|transmembrane protein 26##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)	0.918376	CTCF.p2:1:0.918
chr12	57618768	57618885	reg1023375.p1	6.435	+	AY358614 NM_007224 TSC_hg19_v1_chr12_+_57610601 BC036679 AK094231 AK290949 BC053581 CU690992	-8162	+	TSC_hg19_v1_chr12_+_57522452 BC045107	-96363	+	TSC_hg19_v1_chr12_+_57522265 BC052593 BC072015 NM_002332 X13916	-96544	+	NM_001166356 NM_005412 TSC_hg19_v1_chr12_+_57623504 AK055053 AK223555 AK298231 AK301339 AK303827 BC032584 BC044211 AK295941 BC008066 BC012833 BC011911 BC091501 CU680112 CU689432 AB527799 BT006866 DQ891309 DQ894430	4632	+	NM_001166358 BX647711 AK301443 TSC_hg19_v1_chr12_+_57623972 BX648847 NM_001166359 NM_001166357 BC004189 BC004215 BC008711 AK296183 AK297173 AK315916	5162	+	CR457176 AF164796 AK129629 TSC_hg19_v1_chr12_-_57630888	12053	-	AY358614|NXPH4|11247|neurexophilin 4##NM_007224|NXPH4|11247|neurexophilin 4##BC036679|NXPH4|11247|neurexophilin 4##AK094231|NXPH4|11247|neurexophilin 4##AK290949|NXPH4|11247|neurexophilin 4##BC053581|NXPH4|11247|neurexophilin 4##BC045107|LRP1|4035|low density lipoprotein receptor-related protein 1##BC052593|LRP1|4035|low density lipoprotein receptor-related protein 1##BC072015|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_002332|LRP1|4035|low density lipoprotein receptor-related protein 1##X13916|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_001166356|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_005412|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK055053|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK223555|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK298231|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301339|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK303827|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC032584|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC044211|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK295941|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008066|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC011911|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC091501|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BT006866|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ891309|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ894430|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166358|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX647711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301443|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX648847|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166359|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166357|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK296183|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK297173|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK315916|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##CR457176|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AF164796|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AK129629|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2	0.248983	CTCF.p2:-1:0.249
chr10	82203495	82203605	reg1021421.p1	6.434	+	NM_001243778 NM_001243782 TSC_hg19_v1_chr10_+_82173588 AK126292 AK225387 BC005871 BC071938	-29957	+	TSC_hg19_v1_chr10_+_82168316 NM_001243780 NM_001243781 NM_032333 AK075447 AK074643 AK315440 AY359059	-35247	+	NM_001243779	-35966	+	TSC_hg19_v1_chr10_+_82214037 BC093016 NM_001128309 NM_030927	10425	+	AK074558 AK295321 AL136638 TSC_hg19_v1_chr10_+_82214066	10518	+	TSC_hg19_v1_chr10_+_82214071 AF311903	10521	+	NM_001243778|C10orf58|84293|chromosome 10 open reading frame 58##NM_001243782|C10orf58|84293|chromosome 10 open reading frame 58##AK126292|C10orf58|84293|chromosome 10 open reading frame 58##AK225387|C10orf58|84293|chromosome 10 open reading frame 58##BC005871|C10orf58|84293|chromosome 10 open reading frame 58##BC071938|C10orf58|84293|chromosome 10 open reading frame 58##NM_001243780|C10orf58|84293|chromosome 10 open reading frame 58##NM_001243781|C10orf58|84293|chromosome 10 open reading frame 58##NM_032333|C10orf58|84293|chromosome 10 open reading frame 58##AK075447|C10orf58|84293|chromosome 10 open reading frame 58##AK074643|C10orf58|84293|chromosome 10 open reading frame 58##AK315440|C10orf58|84293|chromosome 10 open reading frame 58##AY359059|C10orf58|84293|chromosome 10 open reading frame 58##NM_001243779|C10orf58|84293|chromosome 10 open reading frame 58##BC093016|TSPAN14|81619|tetraspanin 14##NM_001128309|TSPAN14|81619|tetraspanin 14##NM_030927|TSPAN14|81619|tetraspanin 14##AK074558|TSPAN14|81619|tetraspanin 14##AK295321|TSPAN14|81619|tetraspanin 14##AL136638|TSPAN14|81619|tetraspanin 14##AF311903|TSPAN14|81619|tetraspanin 14	0.980074	CTCF.p2:11:0.980
chr12	108569261	108569370	reg1022600.p1	6.434	+	BC110330 AB018332 NM_014653	-45828	+	AY238895 NM_203436	-401154	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-414314	-	NM_001142345	145123	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	163769	-	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	339767	+	BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing	0.254599	CTCF.p2:-4:0.255
chr16	83480494	83480594	reg1019175.p1	6.434	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-819875	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	-819955	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	-820150	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	361056	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	361112	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	452225	+	AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase	0.972357	CTCF.p2:30:0.972
chr6	54132730	54132847	reg1022116.p1	6.433	+	NM_138569 BX647567 AK055530	-249038	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	-472857	+	TSC_hg19_v1_chr6_+_53659776 BC003193 NM_018214	-473029	+	BC070278 NM_014464 AK312918 BC056235 AB022277 AF195116 AF195117 CU687080 CU691132 EU832329 EU832414	40487	+	AK055204 NM_001010872 BC101628 BC112275	578800	+	NM_001526 AK314279	906306	+	NM_138569|MLIP|90523|muscular LMNA-interacting protein##BX647567|MLIP|90523|muscular LMNA-interacting protein##AK055530|MLIP|90523|muscular LMNA-interacting protein##AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1##BC003193|LRRC1|55227|leucine rich repeat containing 1##NM_018214|LRRC1|55227|leucine rich repeat containing 1##BC070278|TINAG|27283|tubulointerstitial nephritis antigen##NM_014464|TINAG|27283|tubulointerstitial nephritis antigen##AK312918|TINAG|27283|tubulointerstitial nephritis antigen##BC056235|TINAG|27283|tubulointerstitial nephritis antigen##AB022277|TINAG|27283|tubulointerstitial nephritis antigen##AF195116|TINAG|27283|tubulointerstitial nephritis antigen##AF195117|TINAG|27283|tubulointerstitial nephritis antigen##EU832329|TINAG|27283|tubulointerstitial nephritis antigen##EU832414|TINAG|27283|tubulointerstitial nephritis antigen##AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B##NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2##AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2	0.863652	CTCF.p2:5:0.864
chr1	108964029	108964127	reg1021597.p1	6.432	+	BC125161 BC125162 AK057395 AK316438 AK302318 NM_001143989	-177396	-	TSC_hg19_v1_chr1_+_108742987 AK130480	-221069	+	TSC_hg19_v1_chr1_-_108742975 AK304165 NM_013386	-221093	-	NM_001143987 NM_001143988 BC125161 BC125162	28844	+	BC127898 BC150530 NM_001010883 BC140863 BC140865	138964	+	BC088366 TSC_hg19_v1_chr1_-_109203698 NM_001102592 BC012198	239690	-	BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4##NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK304165|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_013386|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_001143987|NBPF6|653149|neuroblastoma breakpoint family, member 6##NM_001143988|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##BC127898|FAM102B|284611|family with sequence similarity 102, member B##BC150530|FAM102B|284611|family with sequence similarity 102, member B##NM_001010883|FAM102B|284611|family with sequence similarity 102, member B##BC140863|FAM102B|284611|family with sequence similarity 102, member B##BC140865|FAM102B|284611|family with sequence similarity 102, member B##BC088366|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_001102592|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##BC012198|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)	0.920076	CTCF.p2:-1:0.920
chr1	28967427	28967556	reg1026308.p1	6.432	+	NM_001193532 AK026009	-48475	+	BC033175 NM_152304 AK312176	-48749	+	BC064589 BC068048 AK092096 BC045792 TSC_hg19_v1_chr1_-_28908385	-59121	-	BC011986 TSC_hg19_v1_chr1_-_28969617 U57693 X84002 AK310097 NM_001135218 NM_005644	2089	-	TSC_hg19_v1_chr1_+_28995244 NM_006582 NM_024482 AK000892	27738	+	BC001473 AK315195 AK315436 AF173868 AF203694 AK023126 TSC_hg19_v1_chr1_+_28995361	27837	+	NM_001193532|RAB42|115273|RAB42, member RAS oncogene family##BC033175|RAB42|115273|RAB42, member RAS oncogene family##NM_152304|RAB42|115273|RAB42, member RAS oncogene family##AK312176|RAB42|115273|RAB42, member RAS oncogene family##BC064589|SNHG12|85028|small nucleolar RNA host gene 12 (non-protein coding)##BC068048|SNHG12|85028|small nucleolar RNA host gene 12 (non-protein coding)##AK092096|SNHG12|85028|small nucleolar RNA host gene 12 (non-protein coding)##BC045792|SNHG12|85028|small nucleolar RNA host gene 12 (non-protein coding)##BC011986|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##U57693|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##X84002|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##AK310097|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##NM_001135218|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##NM_005644|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##NM_006582|GMEB1|10691|glucocorticoid modulatory element binding protein 1##NM_024482|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK000892|GMEB1|10691|glucocorticoid modulatory element binding protein 1##BC001473|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK315195|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK315436|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AF173868|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AF203694|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK023126|GMEB1|10691|glucocorticoid modulatory element binding protein 1	0.0	
chr16	16689262	16689410	reg1019755.p1	6.432	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-362806	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-362848	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-362854	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	875469	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1884055	-	TSC_hg19_v1_chr16_-_18798077 AK127316	2108760	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.958463	CTCF.p2:16:0.958
chr16	89307326	89307424	reg1021019.p1	6.432	+	TSC_hg19_v1_chr16_+_89284112 NM_001201407 NM_182531 AK056437 AK295122	-23248	+	NM_001242757	-40847	-	TSC_hg19_v1_chr16_+_89238171 D83542 NM_004933 AK308596 AK308631 BC008951 DQ893277 DQ896608	-69176	+	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	42699	-	BC041585 TSC_hg19_v1_chr16_-_89351073	43581	-	AK293862 NM_001242885	80165	+	NM_001201407|ZNF778|197320|zinc finger protein 778##NM_182531|ZNF778|197320|zinc finger protein 778##AK056437|ZNF778|197320|zinc finger protein 778##NM_001242757|SLC22A31|146429|solute carrier family 22, member 31##D83542|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##NM_004933|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##AK308631|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##BC008951|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##DQ893277|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##DQ896608|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##BC041585|ANKRD11|29123|ankyrin repeat domain 11##AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036	0.999928	CTCF.p2:3:1.000
chr5	78182563	78182708	reg1023473.p1	6.432	+	TSC_hg19_v1_chr5_-_77944584 NM_005779	-238069	-	CR936660 TSC_hg19_v1_chr5_-_77845052	-337612	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-376439	-	J05225 TSC_hg19_v1_chr5_-_78281101	98453	-	AK290865 TSC_hg19_v1_chr5_-_78281134	98498	-	TSC_hg19_v1_chr5_-_78281142 AK314903	98511	-	NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B##AK314903|ARSB|411|arylsulfatase B	0.914693	CTCF.p2:-7:0.915
chr1	160399563	160399743	reg1002829.p4	6.431	+	NM_020335 TSC_hg19_v1_chr1_+_160370394	-29274	+	M96739 AK313700 NM_005598 BC013789	-62789	+	NM_001098398 NM_004371 U24105	-86250	-	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	93376	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	149594	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	149635	-	NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##NM_001098398|COPA|1314|coatomer protein complex, subunit alpha##NM_004371|COPA|1314|coatomer protein complex, subunit alpha##U24105|COPA|1314|coatomer protein complex, subunit alpha##AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule	0.0	
chr3	49943844	49943962	reg1022412.p1	6.431	+	TSC_hg19_v1_chr3_-_49941304 NM_001244937 NM_002447	-2601	-	TSC_hg19_v1_chr3_-_49907340 BC019256 BC000497 BC001921 BC005828 BC017363 AK297437 BX647074 AK299953 AL136697 AK074899 AK297258 AK295588 AK075294 AK074856 NM_024046 AK315525	-36558	-	AB451320 AB451449 AB590668 CU674148 EF036504 TSC_hg19_v1_chr3_-_49894001 AK225873 BC000310 BC019283 AK292172 NM_005879 U77845 AK295780	-49958	-	BC047022 BC009459 AK092018 AK307140 AX747314 AK074404 TSC_hg19_v1_chr3_-_49967263 BC006299 AK315630 NM_001142501 NM_032355	23416	-	AK291719 NM_001167582 NM_005777 AK298108 AF069517 AL832236 TSC_hg19_v1_chr3_+_49977575 BX648535	33623	+	AK308794 AK303371 TSC_hg19_v1_chr3_+_49977584 AF091264 AK093836 AY216800 BC030057 EF566883 EF566884 EF566885 BC046643 AF042857	33700	+	NM_001244937|MST1R|4486|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)##NM_002447|MST1R|4486|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)##BC019256|CAMKV|79012|CaM kinase-like vesicle-associated##BC000497|CAMKV|79012|CaM kinase-like vesicle-associated##BC001921|CAMKV|79012|CaM kinase-like vesicle-associated##BC005828|CAMKV|79012|CaM kinase-like vesicle-associated##BC017363|CAMKV|79012|CaM kinase-like vesicle-associated##AK297437|CAMKV|79012|CaM kinase-like vesicle-associated##BX647074|CAMKV|79012|CaM kinase-like vesicle-associated##AK299953|CAMKV|79012|CaM kinase-like vesicle-associated##AL136697|CAMKV|79012|CaM kinase-like vesicle-associated##AK074899|CAMKV|79012|CaM kinase-like vesicle-associated##AK297258|CAMKV|79012|CaM kinase-like vesicle-associated##AK295588|CAMKV|79012|CaM kinase-like vesicle-associated##AK075294|CAMKV|79012|CaM kinase-like vesicle-associated##AK074856|CAMKV|79012|CaM kinase-like vesicle-associated##NM_024046|CAMKV|79012|CaM kinase-like vesicle-associated##AK315525|CAMKV|79012|CaM kinase-like vesicle-associated##AB451320|TRAIP|10293|TRAF interacting protein##AB451449|TRAIP|10293|TRAF interacting protein##EF036504|TRAIP|10293|TRAF interacting protein##AK225873|TRAIP|10293|TRAF interacting protein##BC000310|TRAIP|10293|TRAF interacting protein##BC019283|TRAIP|10293|TRAF interacting protein##AK292172|TRAIP|10293|TRAF interacting protein##NM_005879|TRAIP|10293|TRAF interacting protein##U77845|TRAIP|10293|TRAF interacting protein##AK295780|TRAIP|10293|TRAF interacting protein##BC047022|MON1A|84315|MON1 homolog A (yeast)##BC009459|MON1A|84315|MON1 homolog A (yeast)##AK092018|MON1A|84315|MON1 homolog A (yeast)##AK307140|MON1A|84315|MON1 homolog A (yeast)##AK074404|MON1A|84315|MON1 homolog A (yeast)##BC006299|MON1A|84315|MON1 homolog A (yeast)##AK315630|MON1A|84315|MON1 homolog A (yeast)##NM_001142501|MON1A|84315|MON1 homolog A (yeast)##NM_032355|MON1A|84315|MON1 homolog A (yeast)##AK291719|RBM6|10180|RNA binding motif protein 6##NM_001167582|RBM6|10180|RNA binding motif protein 6##NM_005777|RBM6|10180|RNA binding motif protein 6##AK298108|RBM6|10180|RNA binding motif protein 6##AF069517|RBM6|10180|RNA binding motif protein 6##AL832236|RBM6|10180|RNA binding motif protein 6##BX648535|RBM6|10180|RNA binding motif protein 6##AK308794|RBM6|10180|RNA binding motif protein 6##AK303371|RBM6|10180|RNA binding motif protein 6##AF091264|RBM6|10180|RNA binding motif protein 6##AK093836|RBM6|10180|RNA binding motif protein 6##AY216800|RBM6|10180|RNA binding motif protein 6##BC030057|RBM6|10180|RNA binding motif protein 6##BC046643|RBM6|10180|RNA binding motif protein 6##AF042857|RBM6|10180|RNA binding motif protein 6	0.651974	CTCF.p2:13:0.652
chr8	130564820	130565000	reg1019786.p2	6.431	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1758127	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1816420	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1816585	+	AB042405 NM_031415	234223	-	BC003599 TSC_hg19_v1_chr8_-_130951934	387005	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	387096	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr1	97516148	97516258	reg1021383.p2	6.430	+	BC030757 TSC_hg19_v1_chr1_+_97260652	-255620	+	NM_021190 TSC_hg19_v1_chr1_+_97187343 AK092216 AB051232 AK299755 AK299922 AB209266 AF530580 AF530581 AF176085 AK299897 BC016582 AB051233	-328919	+	AB055763 TSC_hg19_v1_chr1_-_97145197	-371007	-	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	870286	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	870356	-	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	870403	-	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2##AK092216|PTBP2|58155|polypyrimidine tract binding protein 2##AB051232|PTBP2|58155|polypyrimidine tract binding protein 2##AK299755|PTBP2|58155|polypyrimidine tract binding protein 2##AK299922|PTBP2|58155|polypyrimidine tract binding protein 2##AB209266|PTBP2|58155|polypyrimidine tract binding protein 2##AF530580|PTBP2|58155|polypyrimidine tract binding protein 2##AF530581|PTBP2|58155|polypyrimidine tract binding protein 2##AF176085|PTBP2|58155|polypyrimidine tract binding protein 2##AK299897|PTBP2|58155|polypyrimidine tract binding protein 2##BC016582|PTBP2|58155|polypyrimidine tract binding protein 2##AB051233|PTBP2|58155|polypyrimidine tract binding protein 2##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase	0.516838	CTCF.p2:3:0.517
chr15	74604221	74604330	reg1022167.p1	6.429	+	NM_025055 AK057417	-75571	+	AK299191 NM_001199040	-102230	-	AF352729 AY358748 BC015881 AK056125 NM_001142617 NM_001142619 NM_001142620 TSC_hg19_v1_chr15_-_74501378	-102932	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	6630	+	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	54260	-	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	55728	-	NM_025055|CCDC33|80125|coiled-coil domain containing 33##AK057417|CCDC33|80125|coiled-coil domain containing 33##AK299191|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001199040|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AF352729|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AY358748|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##BC015881|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AK056125|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142617|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142619|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142620|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	0.868454	CTCF.p2:0:0.812
chr16	31117095	31117184	reg1018414.p1	6.429	+	TSC_hg19_v1_chr16_-_31106250 AK289790 AK312005 AF176924 AY466113 NM_024006 NM_206824	-10919	-	TSC_hg19_v1_chr16_-_31106093 AK129513	-11032	-	AY423044 AY521634 BC000828 TSC_hg19_v1_chr16_-_31106058 BC002911	-11069	-	NM_001122957 NM_005881 TSC_hg19_v1_chr16_+_31119706	2546	+	TSC_hg19_v1_chr16_+_31119738 BC007363 AK130145	2597	+	TSC_hg19_v1_chr16_+_31119750 BC009872	2610	+	AK289790|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##AK312005|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##AF176924|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##AY466113|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##NM_024006|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##NM_206824|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##AK129513|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##AY423044|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##AY521634|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##BC000828|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##BC002911|VKORC1|79001|vitamin K epoxide reductase complex, subunit 1##NM_001122957|BCKDK|10295|branched chain ketoacid dehydrogenase kinase##NM_005881|BCKDK|10295|branched chain ketoacid dehydrogenase kinase##BC007363|BCKDK|10295|branched chain ketoacid dehydrogenase kinase##AK130145|BCKDK|10295|branched chain ketoacid dehydrogenase kinase##BC009872|BCKDK|10295|branched chain ketoacid dehydrogenase kinase	0.0	
chr2	176147174	176147319	reg1023772.p1	6.429	+	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	-100942	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	-114351	-	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	-277233	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	719729	-	NM_001080458	801443	-	TSC_hg19_v1_chr2_+_176957451 NM_000523 AB463753	810298	+	CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715##NM_001080458|EVX2|344191|even-skipped homeobox 2##NM_000523|HOXD13|3239|homeobox D13	0.039889	
chr2	60792744	60792865	reg1022520.p1	6.429	+	AF080216 TSC_hg19_v1_chr2_-_60780784	-12026	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	-12282	-	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2324322	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	190680	+	TSC_hg19_v1_chr2_+_61108702 AK303926	315901	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	315933	+	AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)	1.29087	CTCF.p2:23:0.744	CTCF.p2:-107:0.547
chr3	13242598	13242699	reg1021683.p1	6.429	+	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	-128050	-	TSC_hg19_v1_chr3_-_13057189 BC071805	-185430	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	-233540	-	AB020713 TSC_hg19_v1_chr3_-_13384784	142117	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	219084	-	TSC_hg19_v1_chr3_-_13461832 BC020573 NM_024923	219169	-	AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##AB020713|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa##BC020573|NUP210|23225|nucleoporin 210kDa##NM_024923|NUP210|23225|nucleoporin 210kDa	0.230552	CTCF.p2:-13:0.231
chr10	30929011	30929094	reg1020216.p1	6.428	+	AF139543 BC066294 NM_183058	-10417	-	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-205931	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-206113	+	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	359400	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	391769	-	TSC_hg19_v1_chr10_+_31607451 BX647794	678384	+	AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1	0.987867	CTCF.p2:8:0.988
chr6	160054353	160054472	reg1023554.p1	6.428	+	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	-463982	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-588311	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-633191	-	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	59838	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	59950	-	TSC_hg19_v1_chr6_+_160148149 AK290854 AF374416 NM_004906 NM_152858 BC000383 BC004432 BC069192	93760	+	DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial##AK290854|WTAP|9589|Wilms tumor 1 associated protein##AF374416|WTAP|9589|Wilms tumor 1 associated protein##NM_004906|WTAP|9589|Wilms tumor 1 associated protein##NM_152858|WTAP|9589|Wilms tumor 1 associated protein##BC000383|WTAP|9589|Wilms tumor 1 associated protein##BC004432|WTAP|9589|Wilms tumor 1 associated protein##BC069192|WTAP|9589|Wilms tumor 1 associated protein	0.990367	CTCF.p2:11:0.990
chr7	26331348	26331470	reg1019060.p1	6.428	+	TSC_hg19_v1_chr7_+_26242052 AF086270	-89352	+	TSC_hg19_v1_chr7_+_26241400 BX647444 AF136630	-90019	+	TSC_hg19_v1_chr7_+_26241368 BX648807	-90060	+	TSC_hg19_v1_chr7_+_26331538 NM_001199835 NM_013322 AK316088 BC034992	112	+	TSC_hg19_v1_chr7_+_26331633 BC031050 AK312850 AK296142	238	+	NM_001199837 AK307905	69119	+	BX647444|CBX3|11335|chromobox homolog 3##AF136630|CBX3|11335|chromobox homolog 3##BX648807|CBX3|11335|chromobox homolog 3##NM_001199835|SNX10|29887|sorting nexin 10##NM_013322|SNX10|29887|sorting nexin 10##AK316088|SNX10|29887|sorting nexin 10##BC034992|SNX10|29887|sorting nexin 10##BC031050|SNX10|29887|sorting nexin 10##AK312850|SNX10|29887|sorting nexin 10##AK296142|SNX10|29887|sorting nexin 10##NM_001199837|SNX10|29887|sorting nexin 10##AK307905|SNX10|29887|sorting nexin 10	0.0	
chr10	55361170	55361287	reg1024148.p1	6.427	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-829802	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-1287113	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-1901881	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	1199770	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	1997546	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	2759786	-	AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor	0.603411	CTCF.p2:-3:0.603
chr1	24853787	24853918	reg1022854.p1	6.427	+	HQ317426 JN203053 NM_001251980 NM_001251982 NM_001251985 EF467309 EF431960 EF529733 AF176116 TSC_hg19_v1_chr1_+_24840858 AY906854 DQ892434 DQ895645 AF176117	-12993	+	HQ317423 HQ317445 HQ317446 NM_001251978	-19769	+	TSC_hg19_v1_chr1_+_24829420 BC035854 NM_001251977 NM_001251981 NM_001251983 NM_013441 HQ287726	-24401	+	TSC_hg19_v1_chr1_+_24882611 NM_001010980 AK124519	28747	+	AF419855 NM_005839 TSC_hg19_v1_chr1_+_24969669	115781	+	TSC_hg19_v1_chr1_+_24969763 BC011019 BC036187	115886	+	HQ317426|RCAN3|11123|RCAN family member 3##JN203053|RCAN3|11123|RCAN family member 3##NM_001251980|RCAN3|11123|RCAN family member 3##NM_001251982|RCAN3|11123|RCAN family member 3##NM_001251985|RCAN3|11123|RCAN family member 3##EF467309|RCAN3|11123|RCAN family member 3##EF431960|RCAN3|11123|RCAN family member 3##EF529733|RCAN3|11123|RCAN family member 3##AF176116|RCAN3|11123|RCAN family member 3##AY906854|RCAN3|11123|RCAN family member 3##DQ892434|RCAN3|11123|RCAN family member 3##DQ895645|RCAN3|11123|RCAN family member 3##AF176117|RCAN3|11123|RCAN family member 3##HQ317423|RCAN3|11123|RCAN family member 3##NM_001251978|RCAN3|11123|RCAN family member 3##BC035854|RCAN3|11123|RCAN family member 3##NM_001251977|RCAN3|11123|RCAN family member 3##NM_001251981|RCAN3|11123|RCAN family member 3##NM_001251983|RCAN3|11123|RCAN family member 3##NM_013441|RCAN3|11123|RCAN family member 3##HQ287726|RCAN3|11123|RCAN family member 3##NM_001010980|C1orf130|400746|chromosome 1 open reading frame 130##AK124519|C1orf130|400746|chromosome 1 open reading frame 130##AF419855|SRRM1|10250|serine/arginine repetitive matrix 1##NM_005839|SRRM1|10250|serine/arginine repetitive matrix 1##BC011019|SRRM1|10250|serine/arginine repetitive matrix 1##BC036187|SRRM1|10250|serine/arginine repetitive matrix 1	0.991193	CTCF.p2:9:0.991
chrX	45641404	45641542	reg1021711.p2	6.427	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	-581360	-	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-909037	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-938160	+	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	665238	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	763383	-	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	763471	+	BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588	0.914118	CTCF.p2:-15:0.914
chr11	92798635	92798742	reg1022354.p2	6.426	+	BC069163 NM_005959 U25341 AY521019	-95849	+	NM_001008781	-713427	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-2814278	+	TSC_hg19_v1_chr11_-_92930978 CU690400	132299	-	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	132397	-	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	265155	+	BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B##NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67	0.167646	
chr2	64553324	64553486	reg1019972.p1	6.425	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-181881	-	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	-306900	-	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	-307143	-	TSC_hg19_v1_chr2_+_64681295 NM_014181	127895	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	128243	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	198079	+	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin	0.0	
chr3	133382708	133382863	reg1022288.p1	6.425	+	BC126209 TSC_hg19_v1_chr3_-_133380768 AB019397 BC151237 D87448 AK302584 BC032633 NM_007027	-2087	-	TSC_hg19_v1_chr3_+_133293256 AK096865 NM_001134423	-89507	+	TSC_hg19_v1_chr3_+_133292835 BC007338	-89991	+	AJ252279 NM_001063 TSC_hg19_v1_chr3_+_133465083	82198	+	BC045772 TSC_hg19_v1_chr3_+_133465111	82326	+	TSC_hg19_v1_chr3_+_133465236 AK222755 AK293842 AK295334 AK295419 AK303753 BX648533 BC059367 DQ923758	82439	+	BC126209|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##AB019397|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##BC151237|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##D87448|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##AK302584|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##BC032633|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##NM_007027|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##AK096865|CDV3|55573|CDV3 homolog (mouse)##NM_001134423|CDV3|55573|CDV3 homolog (mouse)##BC007338|CDV3|55573|CDV3 homolog (mouse)##AJ252279|TF|7018|transferrin##NM_001063|TF|7018|transferrin##BC045772|TF|7018|transferrin##AK222755|TF|7018|transferrin##AK293842|TF|7018|transferrin##AK295334|TF|7018|transferrin##AK295419|TF|7018|transferrin##AK303753|TF|7018|transferrin##BX648533|TF|7018|transferrin##BC059367|TF|7018|transferrin##DQ923758|TF|7018|transferrin	0.817213	CTCF.p2:-2:0.817
chr5	156454161	156454324	reg1022662.p1	6.425	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	-64007	-	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	-700069	+	BX537948 NM_000337 NM_001128209 NM_172244	-700482	+	BC013325 TSC_hg19_v1_chr5_-_156485247	30941	-	TSC_hg19_v1_chr5_-_156485459 NM_001099414 NM_012206	31223	-	AF043724 NM_001173393	31727	-	AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BC013325|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_001099414|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_012206|HAVCR1|26762|hepatitis A virus cellular receptor 1##AF043724|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_001173393|HAVCR1|26762|hepatitis A virus cellular receptor 1	0.365434	CTCF.p2:14:0.365
chr6	10435392	10435535	reg1022130.p2	6.425	+	AK296737 NM_001042425	-15672	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	-19995	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	-20188	-	AK307373 NM_145649 AK291767 AK310216 AL832714	86145	+	NM_001491	120485	+	AK313426 BX647668 NM_145655 BX647576 AL832719 BC130524	150551	+	AK296737|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001042425|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##AK307373|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145649|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK291767|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK310216|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832714|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK313426|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647668|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145655|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647576|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832719|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BC130524|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)	0.914456	CTCF.p2:23:0.914
chrX	152973932	152974041	reg1020008.p1	6.425	+	AK295495 NM_001142806	-19021	+	BC081558 NM_001142805 NM_005629	-20235	+	AK309148 AK296203 NM_001039582 TSC_hg19_v1_chrX_-_152939817	-34192	-	AK223059 TSC_hg19_v1_chrX_-_152989354	15350	-	TSC_hg19_v1_chrX_-_152989522 AK125631 AK057613 NM_001139457 NM_001139441	15569	-	TSC_hg19_v1_chrX_-_152989810 X81817	15827	-	AK295495|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8##NM_001142806|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8##BC081558|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8##NM_001142805|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8##NM_005629|SLC6A8|6535|solute carrier family 6 (neurotransmitter transporter, creatine), member 8##AK309148|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK296203|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##NM_001039582|PNCK|139728|pregnancy up-regulated non-ubiquitously expressed CaM kinase##AK223059|BCAP31|10134|B-cell receptor-associated protein 31##AK125631|BCAP31|10134|B-cell receptor-associated protein 31##AK057613|BCAP31|10134|B-cell receptor-associated protein 31##NM_001139457|BCAP31|10134|B-cell receptor-associated protein 31##NM_001139441|BCAP31|10134|B-cell receptor-associated protein 31	0.968665	CTCF.p2:24:0.947
chr1	154642472	154642653	reg1000140.p2	6.424	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-42097	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-42148	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-61862	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	189700	-	BX649146 TSC_hg19_v1_chr1_-_154840541	197939	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	200184	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.0	
chr14	69255903	69256013	reg1001932.p3	6.424	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-969438	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-972659	-	AK315462 NM_152443	-1087356	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	3762	-	NM_001244698 NM_004926	4672	-	NM_001244701 AB528867	7026	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr17	29773739	29773868	reg1024349.p1	6.424	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-54939	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-55136	+	TSC_hg19_v1_chr17_-_29648631 BC035572 AK295311 AK312348 NM_001003927 NM_014210	-125105	-	TSC_hg19_v1_chr17_+_29815032 AK097424	41258	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	412468	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	454863	-	BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC035572|EVI2A|2123|ecotropic viral integration site 2A##AK295311|EVI2A|2123|ecotropic viral integration site 2A##AK312348|EVI2A|2123|ecotropic viral integration site 2A##NM_001003927|EVI2A|2123|ecotropic viral integration site 2A##NM_014210|EVI2A|2123|ecotropic viral integration site 2A##AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.50722	CTCF.p2:-6:0.507
chr2	211442396	211442501	reg1019476.p1	6.424	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-21059	+	NM_001122633 AB208800	-100030	+	TSC_hg19_v1_chr2_-_211341454 AK294674 BC028685 NM_001136574 Y11395 AK309295 AK312381 NM_006055 NM_001136575	-100995	-	AK316425 NM_001122634 AK302778 AY317138	15637	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	1960867	-	AK301503 AF130863 NM_016260	2572607	-	NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK294674|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##BC028685|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_001136574|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##Y11395|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##AK309295|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##AK312381|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_006055|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_001136575|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	0.998814	CTCF.p2:-5:0.999
chr3	150127873	150128037	reg1018507.p2	6.424	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	-1192	+	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	-1883	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-438875	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	136015	-	AB022427 TSC_hg19_v1_chr3_-_150264228	136226	-	BC112364 BC112365 TSC_hg19_v1_chr3_-_150264234 AL136807	136293	-	BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC012363|LOC646903|646903|uncharacterized LOC646903##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AB022427|SERP1|27230|stress-associated endoplasmic reticulum protein 1##BC112364|SERP1|27230|stress-associated endoplasmic reticulum protein 1##BC112365|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AL136807|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.02331	
chr6	149366662	149366806	reg1023500.p1	6.424	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-298525	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-702543	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-702744	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	272369	+	AK315038 NM_015093 AK307650	272707	+	AY340238 NM_001002255 BC130305 HQ258040	354774	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.229537	CTCF.p2:0:0.230
chr9	131103813	131103918	reg1019608.p1	6.424	+	BC009959 TSC_hg19_v1_chr9_+_131102955 AK314681	-898	+	TSC_hg19_v1_chr9_+_131102833 AK290222 NM_005094 BC065003	-1042	+	EU216421 TSC_hg19_v1_chr9_+_131085114 AK126646 EU216422 BC011895 AK301333 AB528109 AM392657 EU216423	-18701	+	NM_001135947 NM_030914 TSC_hg19_v1_chr9_+_131133630	29749	+	TSC_hg19_v1_chr9_+_131133650 BC003581 AK001880 AK097029 AK300877 BC011620	29791	+	TSC_hg19_v1_chr9_+_131182704 NM_016174	78859	+	BC009959|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##AK314681|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##AK290222|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##NM_005094|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##BC065003|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##EU216421|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##AK126646|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##EU216422|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##BC011895|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##AK301333|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##AM392657|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##EU216423|COQ4|51117|coenzyme Q4 homolog (S. cerevisiae)##NM_001135947|URM1|81605|ubiquitin related modifier 1##NM_030914|URM1|81605|ubiquitin related modifier 1##BC003581|URM1|81605|ubiquitin related modifier 1##AK001880|URM1|81605|ubiquitin related modifier 1##AK097029|URM1|81605|ubiquitin related modifier 1##AK300877|URM1|81605|ubiquitin related modifier 1##BC011620|URM1|81605|ubiquitin related modifier 1##NM_016174|CERCAM|51148|cerebral endothelial cell adhesion molecule	0.034654	
chr10	2981223	2981345	reg1024459.p1	6.423	+	AF034837 NM_018702	-1201615	-	TSC_hg19_v1_chr10_+_1102822 AK292591	-1878458	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-1878515	+	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	128463	+	AK092597 AX747622 NM_001242339	129534	+	BC021698 TSC_hg19_v1_chr10_+_3151628	170328	+	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet##BC021698|PFKP|5214|phosphofructokinase, platelet	0.703037	CTCF.p2:-11:0.703
chr19	14597347	14597441	reg1018805.p2	6.423	+	TSC_hg19_v1_chr19_-_14586167 BC051286 NM_000955	-11226	-	BC039034 TSC_hg19_v1_chr19_-_14586139 L22647 BC029768	-11252	-	TSC_hg19_v1_chr19_+_14551088 AK292130 AB527818	-46237	+	TSC_hg19_v1_chr19_-_14606928 AF089816 AK290252 AK290948 BC000410 BC012810 BC016169	9521	-	TSC_hg19_v1_chr19_-_14606940 NM_005716 NM_202467 NM_202468 NM_202469 NM_202470 NM_202494	9549	-	CR536485 CR541677 AB463573 CU676466 BC019827 BC002352 BC013157 D49547 NM_006145 TSC_hg19_v1_chr19_-_14629210 X62421	31799	-	BC051286|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##NM_000955|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##BC039034|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##L22647|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##BC029768|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##AK292130|PKN1|5585|protein kinase N1##AF089816|GIPC1|10755|GIPC PDZ domain containing family, member 1##AK290252|GIPC1|10755|GIPC PDZ domain containing family, member 1##AK290948|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC000410|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC012810|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC016169|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_005716|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202467|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202468|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202469|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202470|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202494|GIPC1|10755|GIPC PDZ domain containing family, member 1##CR536485|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##CR541677|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##BC019827|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##BC002352|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##BC013157|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##D49547|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##NM_006145|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##X62421|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	0.953322	CTCF.p2:0:0.953
chr1	165336760	165336884	reg1021098.p1	6.422	+	AK127724 NM_177398	-10871	-	AK122800 NM_001174069	-11347	-	TSC_hg19_v1_chr1_+_164818083 AK022520	-518699	+	AB593016 AK312922 NM_006917	77723	-	TSC_hg19_v1_chr1_+_165513441 NM_001005214 BC132981 BC132983	176650	+	NM_004528	263287	+	AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AB593016|RXRG|6258|retinoid X receptor, gamma##AK312922|RXRG|6258|retinoid X receptor, gamma##NM_006917|RXRG|6258|retinoid X receptor, gamma##NM_001005214|LRRC52|440699|leucine rich repeat containing 52##BC132981|LRRC52|440699|leucine rich repeat containing 52##BC132983|LRRC52|440699|leucine rich repeat containing 52##NM_004528|MGST3|4259|microsomal glutathione S-transferase 3	0.999604	CTCF.p2:-8:1.000
chr11	98886711	98886818	reg1021698.p1	6.422	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-2763590	+	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	-2763722	-	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	-2810361	-	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	4985	+	AB013802 AB013803 NM_175566	540109	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	1671364	+	AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42	0.999165	CTCF.p2:17:0.999
chr2	9473863	9473980	reg1022783.p1	6.422	+	TSC_hg19_v1_chr2_+_9346940 BC063308	-126962	+	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	-127029	+	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	-330100	-	TSC_hg19_v1_chr2_-_9563308 AK093179	89421	-	AK092115 AX747361 TSC_hg19_v1_chr2_-_9563586	89664	-	TSC_hg19_v1_chr2_-_9563587 BC012264 AK299017 AK289817 BX647099 AF012023 AF012024 NM_004763 NM_022334	89693	-	BC063308|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK093179|ITGB1BP1|9270|integrin beta 1 binding protein 1##AK092115|ITGB1BP1|9270|integrin beta 1 binding protein 1##BC012264|ITGB1BP1|9270|integrin beta 1 binding protein 1##AK299017|ITGB1BP1|9270|integrin beta 1 binding protein 1##AK289817|ITGB1BP1|9270|integrin beta 1 binding protein 1##BX647099|ITGB1BP1|9270|integrin beta 1 binding protein 1##AF012023|ITGB1BP1|9270|integrin beta 1 binding protein 1##AF012024|ITGB1BP1|9270|integrin beta 1 binding protein 1##NM_004763|ITGB1BP1|9270|integrin beta 1 binding protein 1##NM_022334|ITGB1BP1|9270|integrin beta 1 binding protein 1	0.243681	CTCF.p2:-9:0.244
chr12	122644644	122644760	reg1023445.p2	6.421	+	BC069272 TSC_hg19_v1_chr12_+_122614551	-30182	+	TSC_hg19_v1_chr12_+_122516682 AF312918	-127985	+	TSC_hg19_v1_chr12_+_122516655 BC151841 NM_014938	-128095	+	AK124107 NM_152759	7563	+	AB590927 BC132998 BC133000 AY499343 NM_001014336	14032	-	TSC_hg19_v1_chr12_+_122667676 NM_001098519	22972	+	BC069272|MLXIP|22877|MLX interacting protein##AF312918|MLXIP|22877|MLX interacting protein##BC151841|MLXIP|22877|MLX interacting protein##NM_014938|MLXIP|22877|MLX interacting protein##AK124107|LRRC43|254050|leucine rich repeat containing 43##NM_152759|LRRC43|254050|leucine rich repeat containing 43##BC132998|IL31|386653|interleukin 31##BC133000|IL31|386653|interleukin 31##AY499343|IL31|386653|interleukin 31##NM_001014336|IL31|386653|interleukin 31##NM_001098519|LRRC43|254050|leucine rich repeat containing 43	0.130096	
chr13	100266923	100267020	reg1021414.p2	6.421	+	TSC_hg19_v1_chr13_+_100258943 NM_206808 AK300510 BC034360 AK095506 AF428253 CU689862	-8051	+	BC041830 TSC_hg19_v1_chr13_+_100229390	-37594	+	TSC_hg19_v1_chr13_+_100153777 BC130293	-113189	+	AF378304 NM_033132	357198	-	TSC_hg19_v1_chr13_+_100633453 AK298232	366484	+	TSC_hg19_v1_chr13_+_100634037 NM_007129	367049	+	NM_206808|CLYBL|171425|citrate lyase beta like##AK300510|CLYBL|171425|citrate lyase beta like##BC034360|CLYBL|171425|citrate lyase beta like##AK095506|CLYBL|171425|citrate lyase beta like##AF428253|CLYBL|171425|citrate lyase beta like##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2##AF378304|ZIC5|85416|Zic family member 5##NM_033132|ZIC5|85416|Zic family member 5##NM_007129|ZIC2|7546|Zic family member 2	0.755912	CTCF.p2:3:0.756
chr1	48702656	48702783	reg1023840.p1	6.421	+	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	-14327	+	NM_001194986	-240158	-	AF042832 NM_004474	-801031	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	234959	-	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	235126	-	BC011804 AK021650 CU675869 NM_024603 BC007932	539778	-	BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001194986|LOC388630|388630|UPF0632 protein A##AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6##BC011804|BEND5|79656|BEN domain containing 5##AK021650|BEND5|79656|BEN domain containing 5##NM_024603|BEND5|79656|BEN domain containing 5##BC007932|BEND5|79656|BEN domain containing 5	0.030924	
chr4	136292422	136292529	reg1020636.p1	6.421	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-1169557	-	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	-2219192	+	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	-2222019	+	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	2161117	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	2161167	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	2870889	-	NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	0.99935	CTCF.p2:1:0.999
chr7	88030474	88030582	reg1021956.p1	6.421	+	BC020600 AF423422 AF423423 AK026806 AK307644 TSC_hg19_v1_chr7_-_87936207 NM_001205315 NM_001205316 NM_024636	-94314	-	TSC_hg19_v1_chr7_-_87856292 AK296601 NM_198901	-174234	-	TSC_hg19_v1_chr7_-_87849391 AK129770 AK310366 NM_003130	-181123	-	BC140826 BC140829 AK056672 AY295769 NM_181646	358188	+	BC028365 NM_152706	394502	-	NM_012449 TSC_hg19_v1_chr7_+_89783782 AK308452 BC011802	1753209	+	BC020600|STEAP4|79689|STEAP family member 4##AF423422|STEAP4|79689|STEAP family member 4##AF423423|STEAP4|79689|STEAP family member 4##AK026806|STEAP4|79689|STEAP family member 4##AK307644|STEAP4|79689|STEAP family member 4##NM_001205315|STEAP4|79689|STEAP family member 4##NM_001205316|STEAP4|79689|STEAP family member 4##NM_024636|STEAP4|79689|STEAP family member 4##AK296601|SRI|6717|sorcin##NM_198901|SRI|6717|sorcin##AK129770|SRI|6717|sorcin##AK310366|SRI|6717|sorcin##NM_003130|SRI|6717|sorcin##BC140826|ZNF804B|219578|zinc finger protein 804B##BC140829|ZNF804B|219578|zinc finger protein 804B##AK056672|ZNF804B|219578|zinc finger protein 804B##AY295769|ZNF804B|219578|zinc finger protein 804B##NM_181646|ZNF804B|219578|zinc finger protein 804B##BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62##NM_012449|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK308452|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC011802|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1	0.877544	CTCF.p2:-12:0.878
chr13	114275938	114276048	reg1023855.p1	6.420	+	AK310401 TSC_hg19_v1_chr13_+_114239742	-36266	+	AK298521 TSC_hg19_v1_chr13_+_114239635	-36374	+	BC036601 TSC_hg19_v1_chr13_+_114239067 BC011685 NM_007111	-36920	+	CU688596 DQ890817 DQ893973 M75110 BC029059 BC042846 AK310129 NM_000705	36492	-	AK289912 NM_002929 U63973 BC140945 L77503	45584	+	TSC_hg19_v1_chr13_+_114462179 BC018995 NM_182614 AK295653 EU831453 EU831540	186218	+	AK310401|TFDP1|7027|transcription factor Dp-1##AK298521|TFDP1|7027|transcription factor Dp-1##BC036601|TFDP1|7027|transcription factor Dp-1##BC011685|TFDP1|7027|transcription factor Dp-1##NM_007111|TFDP1|7027|transcription factor Dp-1##DQ890817|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##DQ893973|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##M75110|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##BC029059|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##BC042846|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##AK310129|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##NM_000705|ATP4B|496|ATPase, H+/K+ exchanging, beta polypeptide##AK289912|GRK1|6011|G protein-coupled receptor kinase 1##NM_002929|GRK1|6011|G protein-coupled receptor kinase 1##U63973|GRK1|6011|G protein-coupled receptor kinase 1##BC140945|GRK1|6011|G protein-coupled receptor kinase 1##L77503|GRK1|6011|G protein-coupled receptor kinase 1##BC018995|FAM70B|348013|family with sequence similarity 70, member B##NM_182614|FAM70B|348013|family with sequence similarity 70, member B##AK295653|FAM70B|348013|family with sequence similarity 70, member B##EU831453|FAM70B|348013|family with sequence similarity 70, member B##EU831540|FAM70B|348013|family with sequence similarity 70, member B	0.830069	CTCF.p2:-10:0.830
chr18	41905982	41906118	reg1025589.p1	6.420	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1048621	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-1210481	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-2370817	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	354064	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	354818	+	NM_001242692 AK292422	886902	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.929613	CTCF.p2:13:0.930
chrX	86201725	86201840	reg1021378.p1	6.420	+	AK055953 AK298787 NM_001139515	-683812	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	-798317	+	TSC_hg19_v1_chrX_+_85403454 AK290596 NM_001139514 NM_053281	-798330	+	NM_019117 NM_057162 AK056457 AB051474 BC161675 AL832514 AF284765 AF284766 BC140839 BC140840 BC142652 BC146677 AB385497	571023	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	1800458	+	BC117398 BC117400 NM_138960 BC101144 BC101145 AF497480 BC029920 AB464725 HQ258115	2975229	+	AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)##AK290596|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139514|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_053281|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)##NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)##AK056457|KLHL4|56062|kelch-like 4 (Drosophila)##AB051474|KLHL4|56062|kelch-like 4 (Drosophila)##BC161675|KLHL4|56062|kelch-like 4 (Drosophila)##AL832514|KLHL4|56062|kelch-like 4 (Drosophila)##AF284765|KLHL4|56062|kelch-like 4 (Drosophila)##AF284766|KLHL4|56062|kelch-like 4 (Drosophila)##BC140839|KLHL4|56062|kelch-like 4 (Drosophila)##BC140840|KLHL4|56062|kelch-like 4 (Drosophila)##BC142652|KLHL4|56062|kelch-like 4 (Drosophila)##BC146677|KLHL4|56062|kelch-like 4 (Drosophila)##NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1##BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	0.0	
chr19	54865667	54865759	reg1020396.p1	6.419	+	BC109198 BC109199 NM_012276	-15311	-	AF499917 EU915611 EU915612 AF499916 AF499919 AF499918 AF324830 NM_021250 NM_181879 NM_181985 NM_181986	-41338	-	AF014923 AF014924 AF041262 CU688428 DQ891075 DQ894258 AB590305 NM_001172654 U91926 BC028208 AF025527 NM_006865 TSC_hg19_v1_chr19_-_54804279	-61476	-	CR542051 CU693316 DQ892072 DQ895266 AF251509 AF251510 BC027899 AF109683 AF013249 AK309895 TSC_hg19_v1_chr19_-_54876492	10739	-	TSC_hg19_v1_chr19_-_54876541 AK290415 AK315419	10838	-	TSC_hg19_v1_chr19_-_54876672 NM_002287 NM_021706	10982	-	BC109198|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##BC109199|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##NM_012276|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##AF499917|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##EU915611|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##EU915612|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499916|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499919|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499918|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF324830|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_021250|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181879|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181985|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181986|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF014923|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF014924|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF041262|LILRA6|79168|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6##DQ891075|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##DQ894258|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##NM_001172654|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##U91926|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##BC028208|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF025527|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##NM_006865|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##CR542051|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##DQ892072|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##DQ895266|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF251509|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF251510|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##BC027899|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF109683|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF013249|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK309895|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK290415|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK315419|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##NM_002287|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##NM_021706|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1	0.912653	CTCF.p2:-14:0.913
chr4	103266695	103266808	reg1021652.p1	6.419	+	TSC_hg19_v1_chr4_-_103266640 AF193052 BC012125 NM_001135146	-117	-	TSC_hg19_v1_chr4_-_103266398 NM_001135147	-349	-	TSC_hg19_v1_chr4_-_103266365 AB040120 NM_022154 AK304274	-425	-	TSC_hg19_v1_chr4_-_103422436 BC033876	155704	-	TSC_hg19_v1_chr4_+_103422515 BC051765 NM_001165412 NM_003998	155747	+	TSC_hg19_v1_chr4_+_103422554 M58603	155804	+	AF193052|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##BC012125|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_001135146|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_001135147|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##BC051765|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##NM_001165412|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##NM_003998|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##M58603|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1	0.0	
chr12	7047261	7047388	reg1020144.p1	6.418	+	TSC_hg19_v1_chr12_+_7045476 AB209345	-1868	+	TSC_hg19_v1_chr12_+_7037385 NM_001940 D31840	-9891	+	BC051795 NM_001007026	-13699	+	TSC_hg19_v1_chr12_+_7053185 AK311912 BC009925 NM_138425	5873	+	TSC_hg19_v1_chr12_+_7055736 AK313379 NM_080548	8413	+	BC002523 BC007667 TSC_hg19_v1_chr12_+_7055771 AK300167 AB590143 BT007390 CU675749 DQ891946 DQ895133	8496	+	NM_001940|ATN1|1822|atrophin 1##D31840|ATN1|1822|atrophin 1##BC051795|ATN1|1822|atrophin 1##NM_001007026|ATN1|1822|atrophin 1##AK311912|C12orf57|113246|chromosome 12 open reading frame 57##BC009925|C12orf57|113246|chromosome 12 open reading frame 57##NM_138425|C12orf57|113246|chromosome 12 open reading frame 57##AK313379|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##NM_080548|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##BC002523|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##BC007667|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK300167|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##BT007390|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ891946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ895133|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	0.078315	
chr6	25718494	25718610	reg1021879.p1	6.418	+	AK289477 NM_006998 BC000336 BC003036 Y16752	-66129	+	TSC_hg19_v1_chr6_-_25571218 Y10205	-147294	-	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	-438658	+	CU687518 BC062211 NM_170745	8219	-	AK312055 AB590704 BC066238 BC066239 BC066240 BC066241 BC066242 BC066243 NM_170610	8518	+	AK024903 NM_005495 TSC_hg19_v1_chr6_+_25754969 AK293354	36397	+	AK289477|SCGN|10590|secretagogin, EF-hand calcium binding protein##NM_006998|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC000336|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC003036|SCGN|10590|secretagogin, EF-hand calcium binding protein##Y16752|SCGN|10590|secretagogin, EF-hand calcium binding protein##BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A##BC062211|HIST1H2AA|221613|histone cluster 1, H2aa##NM_170745|HIST1H2AA|221613|histone cluster 1, H2aa##AK312055|HIST1H2BA|255626|histone cluster 1, H2ba##BC066238|HIST1H2BA|255626|histone cluster 1, H2ba##BC066239|HIST1H2BA|255626|histone cluster 1, H2ba##BC066240|HIST1H2BA|255626|histone cluster 1, H2ba##BC066241|HIST1H2BA|255626|histone cluster 1, H2ba##BC066242|HIST1H2BA|255626|histone cluster 1, H2ba##BC066243|HIST1H2BA|255626|histone cluster 1, H2ba##NM_170610|HIST1H2BA|255626|histone cluster 1, H2ba##AK024903|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4##NM_005495|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4##AK293354|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4	0.876223	CTCF.p2:17:0.876
chr12	57425258	57425368	reg1022542.p1	6.417	+	AF216586 AF186112 AX810719 AF136174 AX810703 AF537113 AF537114 AF537115 AF537116 AF537117 AF537118 AF537119 AF537120 AF537121 AY358679 BC032145 NM_001178054 NM_013251	-15004	-	BC140890 BC146867 AB002350 BC152461 TSC_hg19_v1_chr12_-_57400241 AK292468 NM_014830	-25062	-	BC034761 NM_007264 Y13583	-37022	+	AF105424 AF127026 NM_005379 BC059387	18566	-	TSC_hg19_v1_chr12_-_57472533 HQ258223 AB383838 AB006624	47198	-	TSC_hg19_v1_chr12_-_57472537 BC071597 BC117436 BC126300 BC144029 CR749406 AK294566	47227	-	AF216586|TAC3|6866|tachykinin 3##AF186112|TAC3|6866|tachykinin 3##AF537113|TAC3|6866|tachykinin 3##AF537114|TAC3|6866|tachykinin 3##AF537115|TAC3|6866|tachykinin 3##AF537116|TAC3|6866|tachykinin 3##AF537117|TAC3|6866|tachykinin 3##AF537118|TAC3|6866|tachykinin 3##AF537119|TAC3|6866|tachykinin 3##AF537120|TAC3|6866|tachykinin 3##AF537121|TAC3|6866|tachykinin 3##AY358679|TAC3|6866|tachykinin 3##BC032145|TAC3|6866|tachykinin 3##NM_001178054|TAC3|6866|tachykinin 3##NM_013251|TAC3|6866|tachykinin 3##BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39##BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39##AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39##BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39##AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39##NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39##BC034761|GPR182|11318|G protein-coupled receptor 182##NM_007264|GPR182|11318|G protein-coupled receptor 182##Y13583|GPR182|11318|G protein-coupled receptor 182##AF105424|MYO1A|4640|myosin IA##AF127026|MYO1A|4640|myosin IA##NM_005379|MYO1A|4640|myosin IA##BC059387|MYO1A|4640|myosin IA##HQ258223|TMEM194A|23306|transmembrane protein 194A##AB006624|TMEM194A|23306|transmembrane protein 194A##BC071597|TMEM194A|23306|transmembrane protein 194A##BC117436|TMEM194A|23306|transmembrane protein 194A##BC126300|TMEM194A|23306|transmembrane protein 194A##BC144029|TMEM194A|23306|transmembrane protein 194A##CR749406|TMEM194A|23306|transmembrane protein 194A##AK294566|TMEM194A|23306|transmembrane protein 194A	0.893491	CTCF.p2:-6:0.893
chr1	38826636	38826757	reg1021704.p1	6.417	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-314247	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-348266	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-348311	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	498690	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	512320	-	AK312811 BC051675 AK123051 NM_030772	520581	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.81996	CTCF.p2:-12:0.820
chr1	166102620	166102740	reg1021413.p2	6.416	+	AF236637 AK294537 TSC_hg19_v1_chr1_+_165797063 AB062451	-305594	+	TSC_hg19_v1_chr1_+_165796794 NM_012474 BC002906	-305909	+	AK124964 BC009228 TSC_hg19_v1_chr1_+_165738255 BC071770	-364459	+	TSC_hg19_v1_chr1_-_166135951 NM_001017961	33274	-	TSC_hg19_v1_chr1_-_166135982 AB593134	33305	-	TSC_hg19_v1_chr1_-_166136076 BC114214	33460	-	AF236637|UCK2|7371|uridine-cytidine kinase 2##AK294537|UCK2|7371|uridine-cytidine kinase 2##AB062451|UCK2|7371|uridine-cytidine kinase 2##NM_012474|UCK2|7371|uridine-cytidine kinase 2##BC002906|UCK2|7371|uridine-cytidine kinase 2##AK124964|LOC100147773|100147773|uncharacterized LOC100147773##BC009228|LOC100147773|100147773|uncharacterized LOC100147773##BC071770|LOC100147773|100147773|uncharacterized LOC100147773##NM_001017961|FAM78B|149297|family with sequence similarity 78, member B##BC114214|FAM78B|149297|family with sequence similarity 78, member B	0.876405	CTCF.p2:6:0.876
chr11	71054754	71054854	reg1020648.p1	6.416	+	TSC_hg19_v1_chr11_-_70963627 AK096045	-91179	-	AB208025 NM_012309	-118997	-	TSC_hg19_v1_chr11_-_70858244 DQ152234	-196498	-	TSC_hg19_v1_chr11_-_71159417 AF034544 BC000054 AK312775 AK289497	104601	-	TSC_hg19_v1_chr11_-_71159471 AK303881 NM_001163817 NM_001360	104658	-	NM_018161 TSC_hg19_v1_chr11_+_71164256 AK022436 BC003638 BC003666	109432	+	AK096045|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AB208025|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##NM_012309|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##DQ152234|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AF034544|DHCR7|1717|7-dehydrocholesterol reductase##BC000054|DHCR7|1717|7-dehydrocholesterol reductase##AK312775|DHCR7|1717|7-dehydrocholesterol reductase##AK289497|DHCR7|1717|7-dehydrocholesterol reductase##AK303881|DHCR7|1717|7-dehydrocholesterol reductase##NM_001163817|DHCR7|1717|7-dehydrocholesterol reductase##NM_001360|DHCR7|1717|7-dehydrocholesterol reductase##NM_018161|NADSYN1|55191|NAD synthetase 1##AK022436|NADSYN1|55191|NAD synthetase 1##BC003638|NADSYN1|55191|NAD synthetase 1##BC003666|NADSYN1|55191|NAD synthetase 1	0.147923	
chr12	118558839	118558946	reg1021355.p2	6.416	+	TSC_hg19_v1_chr12_-_118541813 BC001437 BC028698 BC034471 NM_019086 AK000681	-17142	-	TSC_hg19_v1_chr12_-_118499892 AK295555	-58957	-	AK310892 TSC_hg19_v1_chr12_-_118498977 BC015887 AK298513 AF229181 NM_018639	-59957	-	TSC_hg19_v1_chr12_+_118573907 NM_002567 BC017396 X75252 AK226006	14983	+	TSC_hg19_v1_chr12_+_118573928 BC008714 AK311927 D16111 BC018799 AK308056 BC031102 AK299414 HM131449	15031	+	TSC_hg19_v1_chr12_+_118573963 AB528565 X85033	15086	+	BC001437|VSIG10|54621|V-set and immunoglobulin domain containing 10##BC028698|VSIG10|54621|V-set and immunoglobulin domain containing 10##BC034471|VSIG10|54621|V-set and immunoglobulin domain containing 10##NM_019086|VSIG10|54621|V-set and immunoglobulin domain containing 10##AK000681|VSIG10|54621|V-set and immunoglobulin domain containing 10##AK295555|WSB2|55884|WD repeat and SOCS box containing 2##AK310892|WSB2|55884|WD repeat and SOCS box containing 2##BC015887|WSB2|55884|WD repeat and SOCS box containing 2##AK298513|WSB2|55884|WD repeat and SOCS box containing 2##AF229181|WSB2|55884|WD repeat and SOCS box containing 2##NM_018639|WSB2|55884|WD repeat and SOCS box containing 2##NM_002567|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC017396|PEBP1|5037|phosphatidylethanolamine binding protein 1##X75252|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK226006|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC008714|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK311927|PEBP1|5037|phosphatidylethanolamine binding protein 1##D16111|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC018799|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK308056|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC031102|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK299414|PEBP1|5037|phosphatidylethanolamine binding protein 1##HM131449|PEBP1|5037|phosphatidylethanolamine binding protein 1##X85033|PEBP1|5037|phosphatidylethanolamine binding protein 1	0.940326	CTCF.p2:-39:0.940
chr6	41335554	41335667	reg1025481.p1	6.416	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-32044	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-81186	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-139542	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	178549	+	TSC_hg19_v1_chr6_+_41514342 BC052803	178727	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	270612	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	0.315699	CTCF.p2:-8:0.316
chrX	40398568	40398673	reg1022658.p1	6.416	+	BC114220 NM_001123383 NM_001123384	-362039	-	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	-441928	-	TSC_hg19_v1_chrX_+_38663536 AK001248	-1735080	+	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	41566	+	AF291814 TSC_hg19_v1_chrX_+_40440231 AK293510 BC084541 AK297007 AF109363	41622	+	TSC_hg19_v1_chrX_+_40440264 AK314633 AK315948	41652	+	BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF291814|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK293510|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##BC084541|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK297007|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF109363|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK314633|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK315948|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.941538	CTCF.p2:-10:0.942
chr1	10752578	10752677	reg1021285.p1	6.415	+	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-217616	+	TSC_hg19_v1_chr1_-_10532605 NM_004401 NM_213566	-220005	-	TSC_hg19_v1_chr1_-_10532555 AB590590 BT006980 CU675773 BC000037 AF103799 AF087573 BC007721 AK313317 AK222546 U91985 BC007112	-220072	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	1924	-	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	104078	-	NM_001170754	289466	-	AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_004401|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##NM_213566|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BT006980|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC000037|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF103799|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF087573|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007721|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK313317|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK222546|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##U91985|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007112|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127	0.919428	CTCF.p2:-14:0.919
chr5	150158811	150158971	reg1023558.p2	6.415	+	TSC_hg19_v1_chr5_+_150158318 AK027847 BC082259 AF313413 BC009719	-537	+	AK125286 NM_032947	-1384	+	CU693212 DQ892339 DQ895544 TSC_hg19_v1_chr5_-_150138580 AF195120 AK000299 AK296787 BC026323 AK025873 AK311693 AK307757 NM_001135643 NM_016221	-20286	-	EU742619 NM_001145805	67193	+	BC117248 BC032607 DQ908918 TSC_hg19_v1_chr5_-_150284372	125442	-	AF395541 TSC_hg19_v1_chr5_-_150284395	125507	-	AK027847|C5orf62|85027|chromosome 5 open reading frame 62##AF313413|C5orf62|85027|chromosome 5 open reading frame 62##BC009719|C5orf62|85027|chromosome 5 open reading frame 62##AK125286|C5orf62|85027|chromosome 5 open reading frame 62##NM_032947|C5orf62|85027|chromosome 5 open reading frame 62##DQ892339|DCTN4|51164|dynactin 4 (p62)##DQ895544|DCTN4|51164|dynactin 4 (p62)##AF195120|DCTN4|51164|dynactin 4 (p62)##AK000299|DCTN4|51164|dynactin 4 (p62)##AK296787|DCTN4|51164|dynactin 4 (p62)##BC026323|DCTN4|51164|dynactin 4 (p62)##AK311693|DCTN4|51164|dynactin 4 (p62)##AK307757|DCTN4|51164|dynactin 4 (p62)##NM_001135643|DCTN4|51164|dynactin 4 (p62)##NM_016221|DCTN4|51164|dynactin 4 (p62)##EU742619|IRGM|345611|immunity-related GTPase family, M##NM_001145805|IRGM|345611|immunity-related GTPase family, M##BC117248|ZNF300|91975|zinc finger protein 300##BC032607|ZNF300|91975|zinc finger protein 300##DQ908918|ZNF300|91975|zinc finger protein 300##AF395541|ZNF300|91975|zinc finger protein 300	0.960139	CTCF.p2:-3:0.960
chr7	61515227	61515328	reg1022503.p1	6.415	+	AK131575 NM_001159279	-4005395	+	AF277624 NM_033273	-4307707	-	Y10275 TSC_hg19_v1_chr7_-_56184079 BC043523 NM_001145712	-5331234	-	NM_001159522	1990543	+	NM_001159524	2152303	+	BC033523 NM_153363	2173574	+	AK131575|ZNF716|441234|zinc finger protein 716##NM_001159279|ZNF716|441234|zinc finger protein 716##AF277624|ZNF479|90827|zinc finger protein 479##NM_033273|ZNF479|90827|zinc finger protein 479##BC043523|LOC389493|389493|uncharacterized protein LOC389493##NM_001145712|LOC389493|389493|uncharacterized protein LOC389493##NM_001159522|ZNF727|442319|zinc finger protein 727##NM_001159524|ZNF735|730291|zinc finger protein 735##BC033523|ZNF679|168417|zinc finger protein 679##NM_153363|ZNF679|168417|zinc finger protein 679	0.0	
chr7	156762954	156763102	reg1023145.p1	6.414	+	TSC_hg19_v1_chr7_+_156742419 AY576779 NM_138400	-20613	+	TSC_hg19_v1_chr7_-_156685878 NM_022458	-77112	-	TSC_hg19_v1_chr7_-_156685868 AL834394 AB463099 AM392621 AM393143 AM393254 AM393828 CU676016 AF402318 BC017663 BC063649 AF107454 AK021727 AK291037 AK299753	-77281	-	TSC_hg19_v1_chr7_+_156798463 AY927456 AY927462 AY927463 AY927458	35472	+	AY927459 AY927461 TSC_hg19_v1_chr7_-_156802024 AY927460 AY927464 NM_001165255	39026	-	X56537 TSC_hg19_v1_chr7_-_156802679	39588	-	AY576779|NOM1|64434|nucleolar protein with MIF4G domain 1##NM_138400|NOM1|64434|nucleolar protein with MIF4G domain 1##NM_022458|LMBR1|64327|limb region 1 homolog (mouse)##AL834394|LMBR1|64327|limb region 1 homolog (mouse)##AM392621|LMBR1|64327|limb region 1 homolog (mouse)##AM393143|LMBR1|64327|limb region 1 homolog (mouse)##AM393254|LMBR1|64327|limb region 1 homolog (mouse)##AM393828|LMBR1|64327|limb region 1 homolog (mouse)##AF402318|LMBR1|64327|limb region 1 homolog (mouse)##BC017663|LMBR1|64327|limb region 1 homolog (mouse)##BC063649|LMBR1|64327|limb region 1 homolog (mouse)##AK021727|LMBR1|64327|limb region 1 homolog (mouse)##AK291037|LMBR1|64327|limb region 1 homolog (mouse)##AK299753|LMBR1|64327|limb region 1 homolog (mouse)##AY927462|MNX1|3110|motor neuron and pancreas homeobox 1##AY927459|MNX1|3110|motor neuron and pancreas homeobox 1##AY927461|MNX1|3110|motor neuron and pancreas homeobox 1##AY927460|MNX1|3110|motor neuron and pancreas homeobox 1##AY927464|MNX1|3110|motor neuron and pancreas homeobox 1##NM_001165255|MNX1|3110|motor neuron and pancreas homeobox 1##X56537|MNX1|3110|motor neuron and pancreas homeobox 1	0.945201	CTCF.p2:-3:0.945
chr8	38627665	38627846	reg1022704.p1	6.414	+	AY072874 AY072875 TSC_hg19_v1_chr8_+_38614814 AK308849	-12969	+	BX647696 NM_001146216	-42052	+	BC137511 BC137512 BC139744 AK125570 NM_207412	-241579	-	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	16967	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	17013	+	AK098787 NM_021623 TSC_hg19_v1_chr8_+_38758793 AK296068 AK291842 AF286164	131056	+	AY072874|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072875|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK308849|TACC1|6867|transforming, acidic coiled-coil containing protein 1##BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1##BC137511|C8orf86|389649|chromosome 8 open reading frame 86##BC137512|C8orf86|389649|chromosome 8 open reading frame 86##BC139744|C8orf86|389649|chromosome 8 open reading frame 86##AK125570|C8orf86|389649|chromosome 8 open reading frame 86##NM_207412|C8orf86|389649|chromosome 8 open reading frame 86##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	0.051229	
chr3	15374042	15374153	reg1020385.p2	6.413	+	TSC_hg19_v1_chr3_-_15374094 AL117422 AK313167 NM_004844	0	-	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	-156	-	TSC_hg19_v1_chr3_+_15247768 AB028639 BC056202 AK314253 CU691130	-126143	+	BC006169 NM_001018009	8790	-	TSC_hg19_v1_chr3_-_15469037 BC022400 AK057791 NM_152396 AK293370	94921	-	TSC_hg19_v1_chr3_+_15469073 NM_033083 AK312330 AK304697 BC041329 AF272973 CU691982	95071	+	AL117422|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AK313167|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_004844|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB028639|CAPN7|23473|calpain 7##BC056202|CAPN7|23473|calpain 7##AK314253|CAPN7|23473|calpain 7##BC006169|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_001018009|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC022400|METTL6|131965|methyltransferase like 6##AK057791|METTL6|131965|methyltransferase like 6##NM_152396|METTL6|131965|methyltransferase like 6##AK293370|METTL6|131965|methyltransferase like 6##NM_033083|EAF1|85403|ELL associated factor 1##AK312330|EAF1|85403|ELL associated factor 1##AK304697|EAF1|85403|ELL associated factor 1##BC041329|EAF1|85403|ELL associated factor 1##AF272973|EAF1|85403|ELL associated factor 1	0.0	
chr8	62565485	62565622	reg1022043.p1	6.413	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	-365003	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-974151	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-974265	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	36793	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	61465	-	TSC_hg19_v1_chr8_-_62627152 BC015518 BC025236 AK298577	61585	-	NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase##BC015518|ASPH|444|aspartate beta-hydroxylase##BC025236|ASPH|444|aspartate beta-hydroxylase##AK298577|ASPH|444|aspartate beta-hydroxylase	0.0	
chr13	25861618	25861755	reg1023243.p1	6.412	+	TSC_hg19_v1_chr13_-_25861621 AL832017 AK093237 AX748005 NM_004685	-31	-	AK314587 TSC_hg19_v1_chr13_-_25861584 BC040012	-111	-	AB384771 AF406619 AM392681 AM392837 CU691804 TSC_hg19_v1_chr13_-_25861510	-238	-	NM_001008564 NM_014089 TSC_hg19_v1_chr13_+_25875768 AK123955 AK303409 AB007870 AK302946 BC001104 CU674550	14101	+	TSC_hg19_v1_chr13_+_25946121 AK127263 NM_016529	84466	+	TSC_hg19_v1_chr13_+_26042926 AK126031	181243	+	AL832017|MTMR6|9107|myotubularin related protein 6##AK093237|MTMR6|9107|myotubularin related protein 6##NM_004685|MTMR6|9107|myotubularin related protein 6##AK314587|MTMR6|9107|myotubularin related protein 6##BC040012|MTMR6|9107|myotubularin related protein 6##AF406619|MTMR6|9107|myotubularin related protein 6##AM392681|MTMR6|9107|myotubularin related protein 6##AM392837|MTMR6|9107|myotubularin related protein 6##NM_001008564|NUPL1|9818|nucleoporin like 1##NM_014089|NUPL1|9818|nucleoporin like 1##AK123955|NUPL1|9818|nucleoporin like 1##AK303409|NUPL1|9818|nucleoporin like 1##AB007870|NUPL1|9818|nucleoporin like 1##AK302946|NUPL1|9818|nucleoporin like 1##BC001104|NUPL1|9818|nucleoporin like 1##AK127263|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##NM_016529|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK126031|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2	0.99879	CTCF.p2:-2:0.999
chr8	95370052	95370200	reg1003963.p3	6.412	+	TSC_hg19_v1_chr8_-_95274548 AK314017 BC022010 NM_005261 NM_181702	-95578	-	U10550 TSC_hg19_v1_chr8_-_95274525	-95604	-	AK312873 NM_001144663	-140596	-	AF007866 NM_001205263	79029	-	BC001965 AF112481 BC020668 AK290437 TSC_hg19_v1_chr8_-_95487344 NM_001205262 NM_012415	117193	-	AB037850 AF116724 HQ258534 TSC_hg19_v1_chr8_-_95565696 AL832487 BC112288 BC113380 NM_015496 NM_183009	195581	-	AK314017|GEM|2669|GTP binding protein overexpressed in skeletal muscle##BC022010|GEM|2669|GTP binding protein overexpressed in skeletal muscle##NM_005261|GEM|2669|GTP binding protein overexpressed in skeletal muscle##NM_181702|GEM|2669|GTP binding protein overexpressed in skeletal muscle##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205262|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AB037850|KIAA1429|25962|KIAA1429##AF116724|KIAA1429|25962|KIAA1429##AL832487|KIAA1429|25962|KIAA1429##BC112288|KIAA1429|25962|KIAA1429##BC113380|KIAA1429|25962|KIAA1429##NM_015496|KIAA1429|25962|KIAA1429##NM_183009|KIAA1429|25962|KIAA1429	0.965506	CTCF.p2:17:0.966
chr10	74094656	74094837	reg1020154.p1	6.411	+	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-60922	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-118635	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-118958	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	19932	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	20180	-	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	188973	-	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1	0.0	
chr12	110318311	110318398	reg1021673.p1	6.411	+	AY372530 AY372531 CU679533 AK313457 AF209704 TSC_hg19_v1_chr12_-_110318304 AY372532 BC009932 NM_016433	-76	-	BC117426 BC143307 BC143315 TSC_hg19_v1_chr12_-_110271207 AJ296305 NM_021625	-47146	-	TSC_hg19_v1_chr12_-_110271182 AL834192	-47167	-	TSC_hg19_v1_chr12_+_110338090 AK092736 AX747696 NM_001143852 BC004285 AK301262	19748	+	AY007230 NM_032300 BC022838	20017	+	AB451294 AB451428 AF124491 AK303198 BT007312 CR533568 AB385285 TSC_hg19_v1_chr12_-_110434050	115685	-	AY372530|GLTP|51228|glycolipid transfer protein##AY372531|GLTP|51228|glycolipid transfer protein##AK313457|GLTP|51228|glycolipid transfer protein##AF209704|GLTP|51228|glycolipid transfer protein##AY372532|GLTP|51228|glycolipid transfer protein##BC009932|GLTP|51228|glycolipid transfer protein##NM_016433|GLTP|51228|glycolipid transfer protein##BC117426|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143307|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143315|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AJ296305|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_021625|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AL834192|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AK092736|TCHP|84260|trichoplein, keratin filament binding##NM_001143852|TCHP|84260|trichoplein, keratin filament binding##BC004285|TCHP|84260|trichoplein, keratin filament binding##AK301262|TCHP|84260|trichoplein, keratin filament binding##AY007230|TCHP|84260|trichoplein, keratin filament binding##NM_032300|TCHP|84260|trichoplein, keratin filament binding##BC022838|TCHP|84260|trichoplein, keratin filament binding##AB451294|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AB451428|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AF124491|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AK303198|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##BT007312|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##CR533568|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2	0.036834	
chr1	236467021	236467149	reg1022278.p1	6.411	+	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	-21769	-	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	-21897	-	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	-161209	+	AK290862 AY028913 NM_145861 BC106873 BC106874 BC114557 BC114560 BC128082	90598	+	AK096339 NM_080738 AY028914 AK291930 BC006533 AY071862	91737	+	NM_201545 AK098613	214456	+	AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##AK290862|EDARADD|128178|EDAR-associated death domain##AY028913|EDARADD|128178|EDAR-associated death domain##NM_145861|EDARADD|128178|EDAR-associated death domain##BC114557|EDARADD|128178|EDAR-associated death domain##BC114560|EDARADD|128178|EDAR-associated death domain##BC128082|EDARADD|128178|EDAR-associated death domain##AK096339|EDARADD|128178|EDAR-associated death domain##NM_080738|EDARADD|128178|EDAR-associated death domain##AY028914|EDARADD|128178|EDAR-associated death domain##AK291930|EDARADD|128178|EDAR-associated death domain##BC006533|EDARADD|128178|EDAR-associated death domain##AY071862|EDARADD|128178|EDAR-associated death domain##NM_201545|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AK098613|LGALS8|3964|lectin, galactoside-binding, soluble, 8	0.221792	CTCF.p2:-10:0.222
chr2	184113747	184113890	reg1020107.p2	6.411	+	AF411516 NM_138285 AF514993 BC022333 BC061698 AK289601 BC111016 TSC_hg19_v1_chr2_+_183989170 BC035597 AK290760 AK298199 CU692362	-124685	+	TSC_hg19_v1_chr2_+_183943518 AF486808 BC093958 BC112005 BC143337 AB038770 AB590332 DQ891206 DQ894389 BX647818	-170169	+	TSC_hg19_v1_chr2_+_183943474 AK314078 BC035000	-170340	+	AY327407 NM_194250 TSC_hg19_v1_chr2_+_185463097 AK307596	1349304	+	BC150198 TSC_hg19_v1_chr2_+_185463252 AK131402	1349425	+	BC142612 TSC_hg19_v1_chr2_+_185463319	1349487	+	AF411516|NUP35|129401|nucleoporin 35kDa##NM_138285|NUP35|129401|nucleoporin 35kDa##AF514993|NUP35|129401|nucleoporin 35kDa##BC022333|NUP35|129401|nucleoporin 35kDa##BC061698|NUP35|129401|nucleoporin 35kDa##AK289601|NUP35|129401|nucleoporin 35kDa##BC111016|NUP35|129401|nucleoporin 35kDa##BC035597|NUP35|129401|nucleoporin 35kDa##AK290760|NUP35|129401|nucleoporin 35kDa##AK298199|NUP35|129401|nucleoporin 35kDa##AF486808|DUSP19|142679|dual specificity phosphatase 19##BC093958|DUSP19|142679|dual specificity phosphatase 19##BC112005|DUSP19|142679|dual specificity phosphatase 19##BC143337|DUSP19|142679|dual specificity phosphatase 19##AB038770|DUSP19|142679|dual specificity phosphatase 19##DQ891206|DUSP19|142679|dual specificity phosphatase 19##DQ894389|DUSP19|142679|dual specificity phosphatase 19##BX647818|DUSP19|142679|dual specificity phosphatase 19##AK314078|DUSP19|142679|dual specificity phosphatase 19##BC035000|DUSP19|142679|dual specificity phosphatase 19##AY327407|ZNF804A|91752|zinc finger protein 804A##NM_194250|ZNF804A|91752|zinc finger protein 804A##AK307596|ZNF804A|91752|zinc finger protein 804A##BC150198|ZNF804A|91752|zinc finger protein 804A##AK131402|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A	0.989273	CTCF.p2:-2:0.989
chr2	223180283	223180363	reg1021425.p2	6.411	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	-16798	-	AK057009 NM_153038 BC109388	-17411	+	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	-21303	-	TSC_hg19_v1_chr2_+_223289261 AK314322	108917	+	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	108984	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	340471	-	EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK314322|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit	0.0	
chr4	83123314	83123414	reg1019710.p1	6.411	+	TSC_hg19_v1_chr4_-_82393062 AK291459 BC036784 AK303625 AK056257 NM_152545	-730304	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	-730381	-	AB528214 D70899 NM_006259 X94612	-997157	-	D55671 TSC_hg19_v1_chr4_-_83294725	171311	-	AF039575 X03910 AB463729 DQ892240 DQ895440 BC002401 TSC_hg19_v1_chr4_-_83294907	171508	-	TSC_hg19_v1_chr4_-_83295122 D55674 AK057836 D55672 BC023977 BC026015	171716	-	AK291459|RASGEF1B|153020|RasGEF domain family, member 1B##BC036784|RASGEF1B|153020|RasGEF domain family, member 1B##AK303625|RASGEF1B|153020|RasGEF domain family, member 1B##AK056257|RASGEF1B|153020|RasGEF domain family, member 1B##NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##D55671|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##AF039575|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##X03910|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##DQ892240|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##DQ895440|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##BC002401|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##D55674|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##AK057836|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##D55672|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##BC023977|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##BC026015|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	0.717269	CTCF.p2:18:0.717
chr5	126083840	126084020	reg1022691.p2	6.411	+	BC130495 BC130497 AK131015 NM_207408 HQ258080	-116515	+	AK023255 NM_032177 TSC_hg19_v1_chr5_+_125936641 BC021161 AK024065 AK298497 AK225464 CR457305 DQ893213 DQ896542	-147298	+	TSC_hg19_v1_chr5_-_125930891 AB489160 EU831757 EU831835 S74728 BC073174 BC071712 AK295526 BC002515 AK312459 AK297365 NM_001182 NM_001201377 NM_001202404	-153074	-	NM_005573 BC052951	28385	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	28901	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	28952	+	BC130495|C5orf48|389320|chromosome 5 open reading frame 48##BC130497|C5orf48|389320|chromosome 5 open reading frame 48##AK131015|C5orf48|389320|chromosome 5 open reading frame 48##NM_207408|C5orf48|389320|chromosome 5 open reading frame 48##HQ258080|C5orf48|389320|chromosome 5 open reading frame 48##AK023255|PHAX|51808|phosphorylated adaptor for RNA export##NM_032177|PHAX|51808|phosphorylated adaptor for RNA export##BC021161|PHAX|51808|phosphorylated adaptor for RNA export##AK024065|PHAX|51808|phosphorylated adaptor for RNA export##AK298497|PHAX|51808|phosphorylated adaptor for RNA export##AK225464|PHAX|51808|phosphorylated adaptor for RNA export##CR457305|PHAX|51808|phosphorylated adaptor for RNA export##DQ893213|PHAX|51808|phosphorylated adaptor for RNA export##DQ896542|PHAX|51808|phosphorylated adaptor for RNA export##EU831757|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##EU831835|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##S74728|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC073174|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC071712|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK295526|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC002515|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK312459|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK297365|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001182|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001201377|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001202404|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_005573|LMNB1|4001|lamin B1##BC052951|LMNB1|4001|lamin B1##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1##AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1	0.616546	CTCF.p2:-32:0.617
chr18	33992856	33992981	reg1022486.p2	6.410	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	-115204	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-225442	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-283030	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	415845	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	415976	-	AB073382 TSC_hg19_v1_chr18_-_34408948	416034	-	AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.858085	CTCF.p2:16:0.858
chr22	29866483	29866628	reg1020602.p1	6.410	+	AJ010228 AJ010229 NM_021026	-31984	+	TSC_hg19_v1_chr22_-_29784570 BC046242 NM_001127 NM_001166019 NM_145730	-81963	-	L13939 TSC_hg19_v1_chr22_-_29784436	-82118	-	AK302660 NM_021076 TSC_hg19_v1_chr22_+_29876208 BC073969 AF203032	9660	+	NM_001002878 NM_001002879 BC003615 TSC_hg19_v1_chr22_-_29949699 AK025385 AB023200 AK225752 NM_001002877 NM_003678	83142	-	BC002371 BC006473 TSC_hg19_v1_chr22_-_29977083 AK290953 AK098367 AK298816 NM_001202502 AK314407	110540	-	AJ010228|RFPL1|5988|ret finger protein-like 1##AJ010229|RFPL1|5988|ret finger protein-like 1##NM_021026|RFPL1|5988|ret finger protein-like 1##BC046242|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_001127|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_001166019|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_145730|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##L13939|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##AK302660|NEFH|4744|neurofilament, heavy polypeptide##NM_021076|NEFH|4744|neurofilament, heavy polypeptide##BC073969|NEFH|4744|neurofilament, heavy polypeptide##AF203032|NEFH|4744|neurofilament, heavy polypeptide##NM_001002878|THOC5|8563|THO complex 5##NM_001002879|THOC5|8563|THO complex 5##BC003615|THOC5|8563|THO complex 5##AK025385|THOC5|8563|THO complex 5##AB023200|THOC5|8563|THO complex 5##AK225752|THOC5|8563|THO complex 5##NM_001002877|THOC5|8563|THO complex 5##NM_003678|THOC5|8563|THO complex 5##BC002371|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##BC006473|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AK290953|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AK098367|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AK298816|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##NM_001202502|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)##AK314407|NIPSNAP1|8508|nipsnap homolog 1 (C. elegans)	0.99747	CTCF.p2:24:0.997
chr9	71175095	71175199	reg1021742.p1	6.410	+	DQ890797 DQ893952 BC029780 NM_153237 TSC_hg19_v1_chr9_-_71155800	-19382	-	BC033073 NM_021965	-203333	+	AY344641 AY344642 NM_199135 BC137365 BC137366 EU446685 BC103887	-257323	+	TSC_hg19_v1_chr9_+_71320206 AK295587 AK292734 NM_003558	145229	+	TSC_hg19_v1_chr9_+_71394980 NM_138333 BC013062 AK126379 AK304099	219804	+	CU680482 TSC_hg19_v1_chr9_+_71395147	219969	+	DQ890797|C9orf71|169693|chromosome 9 open reading frame 71##DQ893952|C9orf71|169693|chromosome 9 open reading frame 71##BC029780|C9orf71|169693|chromosome 9 open reading frame 71##NM_153237|C9orf71|169693|chromosome 9 open reading frame 71##BC033073|PGM5|5239|phosphoglucomutase 5##NM_021965|PGM5|5239|phosphoglucomutase 5##AY344641|FOXD4L3|286380|forkhead box D4-like 3##AY344642|FOXD4L3|286380|forkhead box D4-like 3##NM_199135|FOXD4L3|286380|forkhead box D4-like 3##BC137365|FOXD4L6|653404|forkhead box D4-like 6##BC137366|FOXD4L6|653404|forkhead box D4-like 6##EU446685|FOXD4L6|653404|forkhead box D4-like 6##BC103887|FOXD4L6|653404|forkhead box D4-like 6##AK295587|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##AK292734|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_003558|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_138333|FAM122A|116224|family with sequence similarity 122A##BC013062|FAM122A|116224|family with sequence similarity 122A##AK126379|FAM122A|116224|family with sequence similarity 122A	0.994634	CTCF.p2:-8:0.995
chr17	69080494	69080618	reg1021278.p1	6.409	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-914860	+	BC033038 NM_170742	-979562	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-1009126	+	TSC_hg19_v1_chr17_-_70116937 AL833139	1036382	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	1036603	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	1036614	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.997182	CTCF.p2:8:0.997
chr5	52558334	52558438	reg1022684.p1	6.409	+	TSC_hg19_v1_chr5_-_52405588 BC029287 AF091871 AF117815 AK312887 NM_176806 BC095417	-152790	-	BC046097 AF155659 NM_004531	-153081	-	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	-273266	+	NM_006350 NM_013409 TSC_hg19_v1_chr5_+_52776278	217891	+	TSC_hg19_v1_chr5_+_52776409 BC004107	218026	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	218164	+	BC029287|MOCS2|4338|molybdenum cofactor synthesis 2##AF091871|MOCS2|4338|molybdenum cofactor synthesis 2##AF117815|MOCS2|4338|molybdenum cofactor synthesis 2##AK312887|MOCS2|4338|molybdenum cofactor synthesis 2##NM_176806|MOCS2|4338|molybdenum cofactor synthesis 2##BC095417|MOCS2|4338|molybdenum cofactor synthesis 2##BC046097|MOCS2|4338|molybdenum cofactor synthesis 2##AF155659|MOCS2|4338|molybdenum cofactor synthesis 2##NM_004531|MOCS2|4338|molybdenum cofactor synthesis 2##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##NM_006350|FST|10468|follistatin##NM_013409|FST|10468|follistatin##BC004107|FST|10468|follistatin##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin	0.051068	
chrX	129254792	129254922	reg1020029.p2	6.409	+	BC017194 AK314972 NM_001127197 TSC_hg19_v1_chrX_-_129244713	-10170	-	TSC_hg19_v1_chrX_-_129244474 NM_001421	-10379	-	TSC_hg19_v1_chrX_-_129244438 U32645	-10413	-	DQ016496 NM_001130846	17157	-	CR457379 DQ016498 DQ016500 AL049704 AK314446 TSC_hg19_v1_chrX_-_129299669 AF100928	44795	-	TSC_hg19_v1_chrX_-_129299743 AK000775 AL049703 BC139738	44865	-	BC017194|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##AK314972|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001127197|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001421|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##U32645|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##DQ016496|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_001130846|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##CR457379|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##DQ016498|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##DQ016500|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AL049704|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AK314446|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AF100928|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AK000775|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AL049703|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##BC139738|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1	0.164706	
chr13	66230971	66231119	reg1023924.p1	6.408	+	AK289924 NM_022843	-4241391	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-4241792	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-5259566	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	1573459	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	4451496	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	6209214	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.0	
chr12	115836239	115836377	reg1022739.p1	6.407	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-714168	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-990090	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-992384	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	878642	-	TSC_hg19_v1_chr12_-_116715263 AY338463	878852	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	1134921	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.140036	
chr12	48080550	48080689	reg1022746.p1	6.407	+	TSC_hg19_v1_chr12_+_47610379 BC016154 AK307166	-470288	+	BC008360 NM_138371	-470568	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	-607036	-	TSC_hg19_v1_chr12_-_48099790 BC056415 AK025561 AK299465	19148	-	TSC_hg19_v1_chr12_-_48099814 BC003680	19195	-	TSC_hg19_v1_chr12_-_48099819 NM_001146075 NM_001146076 NM_024604	19212	-	BC016154|FAM113B|91523|family with sequence similarity 113, member B##BC008360|FAM113B|91523|family with sequence similarity 113, member B##NM_138371|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC056415|RPAP3|79657|RNA polymerase II associated protein 3##AK025561|RPAP3|79657|RNA polymerase II associated protein 3##AK299465|RPAP3|79657|RNA polymerase II associated protein 3##BC003680|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146075|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146076|RPAP3|79657|RNA polymerase II associated protein 3##NM_024604|RPAP3|79657|RNA polymerase II associated protein 3	0.176735	
chr3	32440676	32440797	reg1023945.p1	6.407	+	TSC_hg19_v1_chr3_+_32433370 BC010116 AY174113 DQ132881 AK308878	-7333	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	-7567	+	TSC_hg19_v1_chr3_+_32280215 BC041390	-160517	+	CR457231 TSC_hg19_v1_chr3_-_32544290	103536	-	TSC_hg19_v1_chr3_-_32544335 AK000403	103597	-	BC002797 TSC_hg19_v1_chr3_-_32544365 NM_017801	103644	-	BC010116|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AY174113|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##DQ132881|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AK308878|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##CR457231|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##AK000403|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##BC002797|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##NM_017801|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6	0.904996	CTCF.p2:-14:0.905
chr11	46639422	46639536	reg1022247.p1	6.406	+	AK294110 TSC_hg19_v1_chr11_+_46639117 BC002378 AK293109 AB014552 AK223603 AK289641 BC001331	-225	+	TSC_hg19_v1_chr11_+_46639102 BC006191 AK023867	-396	+	TSC_hg19_v1_chr11_+_46638860 NM_001142673 NM_001205119 NM_001205120 NM_001205121 NM_001205122 NM_014741	-651	+	TSC_hg19_v1_chr11_+_46694516 AF052175	55110	+	CU676184 DQ894145 AB528423 TSC_hg19_v1_chr11_-_46717685	78192	-	TSC_hg19_v1_chr11_-_46722124 BC018118 NM_004308 U02570	82646	-	AK294110|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##BC002378|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##AK293109|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##AB014552|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##AK223603|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##AK289641|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##BC001331|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##BC006191|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##AK023867|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##NM_001142673|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##NM_001205119|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##NM_001205120|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##NM_001205121|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##NM_001205122|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##NM_014741|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##AF052175|ATG13|9776|ATG13 autophagy related 13 homolog (S. cerevisiae)##DQ894145|ARHGAP1|392|Rho GTPase activating protein 1##BC018118|ARHGAP1|392|Rho GTPase activating protein 1##NM_004308|ARHGAP1|392|Rho GTPase activating protein 1##U02570|ARHGAP1|392|Rho GTPase activating protein 1	0.403193	CTCF.p2:7:0.403
chr16	85337030	85337126	reg1020485.p1	6.406	+	BC093665 BC111944 AK126284 NM_198491	-191024	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-275708	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-291949	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	307943	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	309875	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	385464	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.999742	CTCF.p2:-10:1.000
chr1	98286138	98286250	reg1021657.p2	6.406	+	BC030757 TSC_hg19_v1_chr1_+_97260652	-1025611	+	NM_021190 TSC_hg19_v1_chr1_+_97187343 AK092216 AB051232 AK299755 AK299922 AB209266 AF530580 AF530581 AF176085 AK299897 BC016582 AB051233	-1098910	+	AB055763 TSC_hg19_v1_chr1_-_97145197	-1140998	-	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	100295	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	100365	-	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	100412	-	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2##AK092216|PTBP2|58155|polypyrimidine tract binding protein 2##AB051232|PTBP2|58155|polypyrimidine tract binding protein 2##AK299755|PTBP2|58155|polypyrimidine tract binding protein 2##AK299922|PTBP2|58155|polypyrimidine tract binding protein 2##AB209266|PTBP2|58155|polypyrimidine tract binding protein 2##AF530580|PTBP2|58155|polypyrimidine tract binding protein 2##AF530581|PTBP2|58155|polypyrimidine tract binding protein 2##AF176085|PTBP2|58155|polypyrimidine tract binding protein 2##AK299897|PTBP2|58155|polypyrimidine tract binding protein 2##BC016582|PTBP2|58155|polypyrimidine tract binding protein 2##AB051233|PTBP2|58155|polypyrimidine tract binding protein 2##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase	0.567077	CTCF.p2:9:0.567
chr20	47195037	47195189	reg1022991.p1	6.406	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-779795	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-780361	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1064429	+	AB037836 TSC_hg19_v1_chr20_-_47444291	249173	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	249326	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	343205	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.924519	CTCF.p2:18:0.925
chr8	121969042	121969137	reg1021169.p1	6.406	+	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-144583	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-144819	-	TSC_hg19_v1_chr8_-_121824090 AB590740	-145026	-	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	684537	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	1824822	+	BC042145 TSC_hg19_v1_chr8_+_123794000	1824905	+	NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2	0.982187	CTCF.p2:6:0.982
chrX	56829389	56829510	reg1004127.p2	6.406	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-73758	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-239398	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-570539	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	192522	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	318479	-	BC071694 NM_019003	334608	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.032302	
chr12	132990698	132990790	reg1001369.p1	6.405	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-84887	-	AF458594 NM_021808	-300172	-	TSC_hg19_v1_chr12_+_132629014 BC071958 CU687200 DQ892518 DQ895730 BC007893	-361688	+	NM_001142641	76412	+	NM_001195520	196292	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	204660	+	BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC071958|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ892518|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ895730|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC007893|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##NM_001142641|FBRSL1|57666|fibrosin-like 1##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2	1.013865	CTCF.p2:1:0.984
chr15	28368720	28368840	reg1021736.p2	6.405	+	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	-24347	-	NM_033223 BC029850 BC045709 S82769	-1152233	+	L08485 AK290453 TSC_hg19_v1_chr15_+_27112237 NM_001165037	-1256544	+	AF071172 BC015486 BC142951 BC045544 NM_004667	198491	-	TSC_hg19_v1_chr15_+_29033278 AK302529	664543	+	TSC_hg19_v1_chr15_+_29077475 BC018626	708702	+	M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##L08485|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AK290453|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_001165037|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene	0.968978	CTCF.p2:-4:0.969
chr15	28371328	28371477	reg1024196.p1	6.405	+	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	-26969	-	NM_033223 BC029850 BC045709 S82769	-1154855	+	L08485 AK290453 TSC_hg19_v1_chr15_+_27112237 NM_001165037	-1259166	+	AF071172 BC015486 BC142951 BC045544 NM_004667	195869	-	TSC_hg19_v1_chr15_+_29033278 AK302529	661921	+	TSC_hg19_v1_chr15_+_29077475 BC018626	706080	+	M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##L08485|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AK290453|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_001165037|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene	0.985844	CTCF.p2:-19:0.986
chr15	60621154	60621313	reg1022756.p2	6.405	+	TSC_hg19_v1_chr15_+_60296509 AK314075	-324684	+	EF565104 TSC_hg19_v1_chr15_+_60296453	-324784	+	AK290944 NM_012182 TSC_hg19_v1_chr15_+_60296425	-324805	+	AB587463 BC068065 BC009564 BC021114 BC052567 BC001388 BC013843 D00017 TSC_hg19_v1_chr15_-_60690186 AK222542 BX640598 AK297923 BC015834 BC023990 BC066955 BC093056 D28364 NM_001002857 NM_001002858 NM_001136015 NM_004039 AK309956 BC016774	68928	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	150041	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	263446	-	AK314075|FOXB1|27023|forkhead box B1##AK290944|FOXB1|27023|forkhead box B1##NM_012182|FOXB1|27023|forkhead box B1##BC068065|ANXA2|302|annexin A2##BC009564|ANXA2|302|annexin A2##BC021114|ANXA2|302|annexin A2##BC052567|ANXA2|302|annexin A2##BC001388|ANXA2|302|annexin A2##BC013843|ANXA2|302|annexin A2##D00017|ANXA2|302|annexin A2##AK222542|ANXA2|302|annexin A2##BX640598|ANXA2|302|annexin A2##AK297923|ANXA2|302|annexin A2##BC015834|ANXA2|302|annexin A2##BC023990|ANXA2|302|annexin A2##BC066955|ANXA2|302|annexin A2##BC093056|ANXA2|302|annexin A2##D28364|ANXA2|302|annexin A2##NM_001002857|ANXA2|302|annexin A2##NM_001002858|ANXA2|302|annexin A2##NM_001136015|ANXA2|302|annexin A2##NM_004039|ANXA2|302|annexin A2##BC016774|ANXA2|302|annexin A2##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A	0.991634	CTCF.p2:-3:0.992
chr15	61088192	61088365	reg1021047.p2	6.405	+	U04899 U04898 NM_002943 NM_134260	-168593	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	-203599	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-317004	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	433146	-	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	433219	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	1264336	-	U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	0.0	
chr4	9637549	9637675	reg1024455.p1	6.405	+	AF529414 NM_001040448	-191353	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-272759	+	AF544012 BC100991 NM_001105662	-277504	+	NM_000798	145645	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	385512	-	AK310895 BC018897 NM_001001290 AK096819	404310	-	AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF544012|USP17|391627|ubiquitin specific peptidase 17##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_000798|DRD5|1816|dopamine receptor D5##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.231673	CTCF.p2:1:0.232
chr13	22688859	22689039	reg1021444.p1	6.404	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-443801	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-510589	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-510640	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	1066166	+	TSC_hg19_v1_chr13_-_23949652 AK125458	1260701	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	1318891	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.0	
chr18	711764	711926	reg1023411.p1	6.404	+	AB464497 AK289986 BC028301 NM_001012716	-53553	-	BC002567 TSC_hg19_v1_chr18_+_657708 BC018858 AK292620 AB590362 DQ892149 AB077207 AB077208 BT006811	-54134	+	AB062290 TSC_hg19_v1_chr18_+_657656 AK314140 X02308	-54197	+	TSC_hg19_v1_chr18_-_712601 NM_202758 X67098 X89602 AK127818 BX648215 AK295850 AK292780 AK309035 BC001285 NM_001126123 NM_017512	737	-	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	100458	-	AK313050 NM_001099733	193098	+	AK289986|C18orf56|494514|chromosome 18 open reading frame 56##BC028301|C18orf56|494514|chromosome 18 open reading frame 56##NM_001012716|C18orf56|494514|chromosome 18 open reading frame 56##BC002567|TYMS|7298|thymidylate synthetase##BC018858|TYMS|7298|thymidylate synthetase##AK292620|TYMS|7298|thymidylate synthetase##DQ892149|TYMS|7298|thymidylate synthetase##AB077207|TYMS|7298|thymidylate synthetase##AB077208|TYMS|7298|thymidylate synthetase##BT006811|TYMS|7298|thymidylate synthetase##AB062290|TYMS|7298|thymidylate synthetase##AK314140|TYMS|7298|thymidylate synthetase##X02308|TYMS|7298|thymidylate synthetase##NM_202758|ENOSF1|55556|enolase superfamily member 1##X67098|ENOSF1|55556|enolase superfamily member 1##X89602|ENOSF1|55556|enolase superfamily member 1##AK127818|ENOSF1|55556|enolase superfamily member 1##BX648215|ENOSF1|55556|enolase superfamily member 1##AK295850|ENOSF1|55556|enolase superfamily member 1##AK292780|ENOSF1|55556|enolase superfamily member 1##AK309035|ENOSF1|55556|enolase superfamily member 1##BC001285|ENOSF1|55556|enolase superfamily member 1##NM_001126123|ENOSF1|55556|enolase superfamily member 1##NM_017512|ENOSF1|55556|enolase superfamily member 1##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)	0.0	
chr20	2435519	2435627	reg1020431.p1	6.404	+	AF540969 AF540970 NM_198994	-74020	+	NM_003245 AK298637 AK299447 AK308249 AK290324 AK291351 AK315236 L10386 BC109075 BC109076	-158924	+	TSC_hg19_v1_chr20_-_2083527 BC034792	-352047	-	TSC_hg19_v1_chr20_-_2451416 X17568 X17567 BC080516	15817	-	TSC_hg19_v1_chr20_-_2451436 AK301034 AK312620 AK301206 AK307093 AK307266	15859	-	TSC_hg19_v1_chr20_-_2451439 BC003530 J04564 NM_003091 NM_198216	15900	-	AF540969|TGM6|343641|transglutaminase 6##AF540970|TGM6|343641|transglutaminase 6##NM_198994|TGM6|343641|transglutaminase 6##NM_003245|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK298637|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK299447|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK308249|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK290324|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291351|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK315236|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##L10386|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109075|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109076|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##X17568|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##X17567|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##BC080516|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK301034|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK312620|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK301206|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK307093|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##BC003530|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##J04564|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##NM_003091|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##NM_198216|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1	0.137128	
chr19	30306347	30306489	reg1021559.p2	6.403	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	-3517	+	TSC_hg19_v1_chr19_-_30206402 NM_031448	-99996	-	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	-100326	-	BC026184 NM_001252641	108132	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	126864	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	556962	+	AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536	0.0	
chr2	176951063	176951184	reg1025048.p1	6.403	+	NM_001080458	-2434	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	-84148	-	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	-904819	-	TSC_hg19_v1_chr2_+_176957451 NM_000523 AB463753	6421	+	BC069088 BC121103 BC121104 NM_021193	13406	+	TSC_hg19_v1_chr2_+_176969236 AK309681	18118	+	NM_001080458|EVX2|344191|even-skipped homeobox 2##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715##CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_000523|HOXD13|3239|homeobox D13##BC069088|HOXD12|3238|homeobox D12##BC121103|HOXD12|3238|homeobox D12##BC121104|HOXD12|3238|homeobox D12##NM_021193|HOXD12|3238|homeobox D12	0.104246	
chr2	197615876	197616000	reg1023169.p1	6.403	+	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	-111581	+	BC117194 BC117198 AB037722 NM_020760	-158646	-	TSC_hg19_v1_chr2_-_197036310 NM_004226	-579620	-	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	48475	-	BC137150 BC137151 AY358249 NM_213608	58999	-	AB128038 AB527353 TSC_hg19_v1_chr2_-_197791382 BX648642 AK022439 NM_024989 BC040517	175506	-	AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_004226|STK17B|9262|serine/threonine kinase 17b##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66##AB128038|PGAP1|80055|post-GPI attachment to proteins 1##BX648642|PGAP1|80055|post-GPI attachment to proteins 1##AK022439|PGAP1|80055|post-GPI attachment to proteins 1##NM_024989|PGAP1|80055|post-GPI attachment to proteins 1##BC040517|PGAP1|80055|post-GPI attachment to proteins 1	0.999302	CTCF.p2:-13:0.999
chr7	94876304	94876424	reg1022755.p1	6.403	+	NM_001166161 NM_001166162 NM_001166163	-337155	+	TSC_hg19_v1_chr7_+_94536986 NM_001166160 NM_017650 AK096514 BC150636	-339398	+	TSC_hg19_v1_chr7_+_94297448 AF038197	-578912	+	M63013 AB528644 M63012 S64615 TSC_hg19_v1_chr7_-_94953802 AK314027 BC074719	77410	-	TSC_hg19_v1_chr7_-_94953845 D84371 U53784 Z70723 NM_000446	77491	-	L48516 AF320003 AF329433 CU687094 TSC_hg19_v1_chr7_-_95025687 AK301772 BC070374 AK304282 NM_000940	149292	-	NM_001166161|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166162|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166163|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166160|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_017650|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##AK096514|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##BC150636|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##AF038197|PEG10|23089|paternally expressed 10##M63013|PON1|5444|paraoxonase 1##M63012|PON1|5444|paraoxonase 1##S64615|PON1|5444|paraoxonase 1##AK314027|PON1|5444|paraoxonase 1##BC074719|PON1|5444|paraoxonase 1##D84371|PON1|5444|paraoxonase 1##U53784|PON1|5444|paraoxonase 1##Z70723|PON1|5444|paraoxonase 1##NM_000446|PON1|5444|paraoxonase 1##L48516|PON3|5446|paraoxonase 3##AF320003|PON3|5446|paraoxonase 3##AF329433|PON3|5446|paraoxonase 3##BC070374|PON3|5446|paraoxonase 3##AK304282|PON3|5446|paraoxonase 3##NM_000940|PON3|5446|paraoxonase 3	0.0	
chr1	25256906	25257066	reg1021965.p1	6.402	+	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-200	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-247	-	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	-561	-	BC013362 AK310945 NM_001031680 AF022726	34556	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	302001	-	BC065040 TSC_hg19_v1_chr1_-_25573922	316937	-	AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr3	134211471	134211606	reg1022429.p1	6.402	+	AK023448 BC068997 TSC_hg19_v1_chr3_+_134205041 NM_025180 AK056465	-6514	+	TSC_hg19_v1_chr3_+_134204899 NM_001042400	-6654	+	BX537696 TSC_hg19_v1_chr3_-_134204864 NM_015391 AK001285 NM_001242374	-6670	-	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	158307	-	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	302613	+	TSC_hg19_v1_chr3_+_134514301 BC111744	302763	+	AK023448|CEP63|80254|centrosomal protein 63kDa##BC068997|CEP63|80254|centrosomal protein 63kDa##NM_025180|CEP63|80254|centrosomal protein 63kDa##AK056465|CEP63|80254|centrosomal protein 63kDa##NM_001042400|CEP63|80254|centrosomal protein 63kDa##BX537696|ANAPC13|25847|anaphase promoting complex subunit 13##NM_015391|ANAPC13|25847|anaphase promoting complex subunit 13##AK001285|ANAPC13|25847|anaphase promoting complex subunit 13##NM_001242374|ANAPC13|25847|anaphase promoting complex subunit 13##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC111744|EPHB1|2047|EPH receptor B1	0.999959	CTCF.p2:-19:1.000
chr4	16445250	16445370	reg1020168.p1	6.402	+	TSC_hg19_v1_chr4_+_16228615 AK093550 AX748197 BC010030	-216674	+	TSC_hg19_v1_chr4_+_16228285 AK096972 BC132927	-217015	+	TSC_hg19_v1_chr4_-_16228103 BC066899 NM_153365	-217173	-	AK300119 AB463834 DQ891981 DQ895171 AK312881 TSC_hg19_v1_chr4_-_16900210 AF068651 AF047337 AF064492 AF064493 BC034019	454816	-	AK226029 TSC_hg19_v1_chr4_-_16900258	454949	-	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	455075	-	AK093550|FLJ39653|202020|uncharacterized FLJ39653##BC010030|FLJ39653|202020|uncharacterized FLJ39653##AK096972|FLJ39653|202020|uncharacterized FLJ39653##BC132927|FLJ39653|202020|uncharacterized FLJ39653##BC066899|TAPT1|202018|transmembrane anterior posterior transformation 1##NM_153365|TAPT1|202018|transmembrane anterior posterior transformation 1##AK300119|LDB2|9079|LIM domain binding 2##DQ891981|LDB2|9079|LIM domain binding 2##DQ895171|LDB2|9079|LIM domain binding 2##AK312881|LDB2|9079|LIM domain binding 2##AF068651|LDB2|9079|LIM domain binding 2##AF047337|LDB2|9079|LIM domain binding 2##AF064492|LDB2|9079|LIM domain binding 2##AF064493|LDB2|9079|LIM domain binding 2##BC034019|LDB2|9079|LIM domain binding 2##AK226029|LDB2|9079|LIM domain binding 2##AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2	0.994054	CTCF.p2:9:0.994
chr7	101950290	101950471	reg1022706.p1	6.402	+	TSC_hg19_v1_chr7_+_101928431 AB000520	-21937	+	TSC_hg19_v1_chr7_+_101928390 NM_020979	-21983	+	M74099 NM_181552	-489499	+	NM_001146210	46508	-	TSC_hg19_v1_chr7_+_102004329 NM_001242713 BC063572 AK098276	53931	+	TSC_hg19_v1_chr7_+_102004338 BC048257 BC066362	53972	+	AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_020979|SH2B2|10603|SH2B adaptor protein 2##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)##NM_001242713|LOC100289561|100289561|uncharacterized LOC100289561##BC063572|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough##AK098276|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough	0.0	
chr14	93644504	93644609	reg1021845.p1	6.401	+	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	-62342	-	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	-62965	-	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-254959	+	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	6644	-	TSC_hg19_v1_chr14_-_93651243 NM_022151	6689	-	AK315522 TSC_hg19_v1_chr14_-_93651261	6712	-	BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1##NM_022151|MOAP1|64112|modulator of apoptosis 1##AK315522|MOAP1|64112|modulator of apoptosis 1	0.945842	CTCF.p2:21:0.946
chr14	94010231	94010390	reg1022734.p1	6.401	+	AY161004 NM_182971 BC101125 BC101126	-196762	+	AK125327 NM_020818	-210746	+	TSC_hg19_v1_chr14_-_93799376 AK291422 BC141850 BX248762 NM_001002860 NM_018167 BC047071	-210906	-	AY225516 AY225517 NM_178013	244455	-	NM_001207071 NM_138344 AK093387 AX748092	374938	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	383398	+	AY161004|COX8C|341947|cytochrome c oxidase subunit VIIIC##NM_182971|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101125|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101126|COX8C|341947|cytochrome c oxidase subunit VIIIC##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)##AK291422|BTBD7|55727|BTB (POZ) domain containing 7##BC141850|BTBD7|55727|BTB (POZ) domain containing 7##BX248762|BTBD7|55727|BTB (POZ) domain containing 7##NM_001002860|BTBD7|55727|BTB (POZ) domain containing 7##NM_018167|BTBD7|55727|BTB (POZ) domain containing 7##BC047071|BTBD7|55727|BTB (POZ) domain containing 7##AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A	0.962782	CTCF.p2:8:0.963
chr15	90705351	90705488	reg1019003.p1	6.401	+	TSC_hg19_v1_chr15_-_90645713 AK312627	-59692	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	-59714	-	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	-59757	-	TSC_hg19_v1_chr15_+_90728151 NM_020210 AK289991 AY358392	22777	+	TSC_hg19_v1_chr15_+_90744561 AY445887 NM_198925 AB051532 BC126438 BC144141 BC110853 AB385501 HQ258520 AK026108	39271	+	TSC_hg19_v1_chr15_-_90777138 AB451276 AB451406 AB463454 CR456955 DQ891196 DQ894379	71709	-	AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_020210|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK289991|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY358392|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY445887|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_198925|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB051532|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC126438|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC144141|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC110853|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##HQ258520|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK026108|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB451276|CIB1|10519|calcium and integrin binding 1 (calmyrin)##AB451406|CIB1|10519|calcium and integrin binding 1 (calmyrin)##CR456955|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ891196|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ894379|CIB1|10519|calcium and integrin binding 1 (calmyrin)	0.515018	CTCF.p2:-63:0.515
chr17	10261214	10261324	reg1021164.p1	6.401	+	TSC_hg19_v1_chr17_-_10101924 AY327406 NM_201433	-159363	-	TSC_hg19_v1_chr17_-_9940004 AK057761 BC006454 NM_201432	-321236	-	TSC_hg19_v1_chr17_-_9939883 AK292987	-321391	-	AF111782 NM_003802	15052	-	AK303395 NM_002472	63997	-	AF111783 NM_017533	111606	-	AY327406|GAS7|8522|growth arrest-specific 7##NM_201433|GAS7|8522|growth arrest-specific 7##AK057761|GAS7|8522|growth arrest-specific 7##BC006454|GAS7|8522|growth arrest-specific 7##NM_201432|GAS7|8522|growth arrest-specific 7##AK292987|GAS7|8522|growth arrest-specific 7##AF111782|MYH13|8735|myosin, heavy chain 13, skeletal muscle##NM_003802|MYH13|8735|myosin, heavy chain 13, skeletal muscle##AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle	0.996935	CTCF.p2:-4:0.997
chr20	61371714	61371894	reg1019862.p3	6.401	+	TSC_hg19_v1_chr20_+_61340165 NM_002531 X70070	-31628	+	TSC_hg19_v1_chr20_+_61273854 BC015727 AK023410 AF205072 AF104334	-97957	+	TSC_hg19_v1_chr20_+_61273818 NM_016354	-98001	+	AK001776 NM_018270 TSC_hg19_v1_chr20_+_61427832 BC014235 BC009889 BC018841 AB085682 AB463516	56043	+	TSC_hg19_v1_chr20_+_61436186 NM_007346 AK314696 AK022234 AF109134 BC008768 BC014137 CU680798 DQ892943 EU176723 BC032666	64389	+	TSC_hg19_v1_chr20_+_61448401 BC011705 NM_001853 DQ892946 DQ896194 L41162	76599	+	NM_002531|NTSR1|4923|neurotensin receptor 1 (high affinity)##X70070|NTSR1|4923|neurotensin receptor 1 (high affinity)##BC015727|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AK023410|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AF205072|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AF104334|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##NM_016354|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AK001776|C20orf20|55257|chromosome 20 open reading frame 20##NM_018270|C20orf20|55257|chromosome 20 open reading frame 20##BC014235|C20orf20|55257|chromosome 20 open reading frame 20##BC009889|C20orf20|55257|chromosome 20 open reading frame 20##BC018841|C20orf20|55257|chromosome 20 open reading frame 20##AB085682|C20orf20|55257|chromosome 20 open reading frame 20##NM_007346|OGFR|11054|opioid growth factor receptor##AK314696|OGFR|11054|opioid growth factor receptor##AK022234|OGFR|11054|opioid growth factor receptor##AF109134|OGFR|11054|opioid growth factor receptor##BC008768|OGFR|11054|opioid growth factor receptor##BC014137|OGFR|11054|opioid growth factor receptor##DQ892943|OGFR|11054|opioid growth factor receptor##EU176723|OGFR|11054|opioid growth factor receptor##BC032666|OGFR|11054|opioid growth factor receptor##BC011705|COL9A3|1299|collagen, type IX, alpha 3##NM_001853|COL9A3|1299|collagen, type IX, alpha 3##DQ892946|COL9A3|1299|collagen, type IX, alpha 3##DQ896194|COL9A3|1299|collagen, type IX, alpha 3##L41162|COL9A3|1299|collagen, type IX, alpha 3	0.0	
chr2	211064012	211064132	reg1023391.p1	6.401	+	TSC_hg19_v1_chr2_-_211036099 BC126155 BC143914 BC032837 NM_152519 AK308432	-28022	-	AK124963 TSC_hg19_v1_chr2_-_211035462	-28652	-	TSC_hg19_v1_chr2_-_211018294 AK074441 BC070141	-45731	-	BC064549 BC039063 AK313498 AK296161 NM_001608	26108	-	X05451 M20643 AK311892 BC005318 NM_079422	104254	-	AB527940 CR456869 TSC_hg19_v1_chr2_-_211179896 NM_079420 AK311942	115767	-	BC126155|C2orf67|151050|chromosome 2 open reading frame 67##BC143914|C2orf67|151050|chromosome 2 open reading frame 67##BC032837|C2orf67|151050|chromosome 2 open reading frame 67##NM_152519|C2orf67|151050|chromosome 2 open reading frame 67##AK308432|C2orf67|151050|chromosome 2 open reading frame 67##AK124963|C2orf67|151050|chromosome 2 open reading frame 67##AK074441|C2orf67|151050|chromosome 2 open reading frame 67##BC070141|C2orf67|151050|chromosome 2 open reading frame 67##BC064549|ACADL|33|acyl-CoA dehydrogenase, long chain##BC039063|ACADL|33|acyl-CoA dehydrogenase, long chain##AK313498|ACADL|33|acyl-CoA dehydrogenase, long chain##AK296161|ACADL|33|acyl-CoA dehydrogenase, long chain##NM_001608|ACADL|33|acyl-CoA dehydrogenase, long chain##X05451|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##M20643|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##AK311892|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##BC005318|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##NM_079422|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast	0.969249	CTCF.p2:22:0.969
chr7	101457509	101457650	reg1022318.p1	6.401	+	BC002778 NM_138403	-185004	-	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	-451362	+	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	-492541	-	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	1630	+	M74099 NM_181552	3302	+	TSC_hg19_v1_chr7_+_101928390 NM_020979	470818	+	BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_020979|SH2B2|10603|SH2B adaptor protein 2	0.958507	CTCF.p2:5:0.959
chrX	19024175	19024291	reg1020769.p2	6.401	+	TSC_hg19_v1_chrX_-_19002476 NM_000292	-21771	-	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	-315189	+	AB464151 AF014459 DQ426892 NM_000330	-334029	-	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	116434	-	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	337849	+	NM_001001671	509145	-	NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001001671|MAP3K15|389840|mitogen-activated protein kinase kinase kinase 15	0.830408	CTCF.p2:-8:0.830
chr1	161612674	161612799	reg1022647.p2	6.400	+	NM_000570	-10984	-	NM_001244753	-11485	-	NM_201563 AK308168 AK307162 BC137397 BC137423 X17652 U90938 U90939 U90940 U90941 CU689254	-61559	+	NM_001002273 NM_001002274 NM_001002275 NM_001190828 NM_004001 AF543826 M31933 X17653 AK308150 AB209585 BC062629 X52473 X62573 BC146678 M28696 M31934 BC031992 BC141826 U90941 AB590317 BC148273 CR407635 CU689254 DQ891344 DQ894525 U87560 U87561 U87562 U87563 U87564 U87565 U87566 U87567 U87568 U87569 U87570 U87571 U87572 U87573 U87574 U87575 U87576 U87577 M31935	20256	+	AF531423 NM_001184866 NM_001184867 NM_001184870 NM_001184871 NM_001184872 NM_001184873 NM_032738	64025	+	AY670683 AY670684 AY670685 AY670686 AY670687 NM_001002901 AY786314	79719	+	NM_000570|FCGR3B|2215|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)##NM_001244753|FCGR3B|2215|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)##NM_201563|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##AK308168|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##AK307162|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC137397|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC137423|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##X17652|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90938|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90939|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90940|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90941|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##NM_001002273|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_001002274|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_001002275|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_001190828|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##NM_004001|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AF543826|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M31933|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##X17653|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AK308150|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AB209585|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##X52473|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##X62573|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC146678|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M28696|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M31934|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC031992|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##BC141826|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U90941|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC148273|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##CR407635|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##DQ891344|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##DQ894525|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87560|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87561|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87562|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87563|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87564|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87565|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87566|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87567|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87568|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87569|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87570|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87571|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87572|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87573|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87574|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87575|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87576|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##U87577|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##M31935|FCGR2B|2213|Fc fragment of IgG, low affinity IIb, receptor (CD32)##AF531423|FCRLA|84824|Fc receptor-like A##NM_001184866|FCRLA|84824|Fc receptor-like A##NM_001184867|FCRLA|84824|Fc receptor-like A##NM_001184870|FCRLA|84824|Fc receptor-like A##NM_001184871|FCRLA|84824|Fc receptor-like A##NM_001184872|FCRLA|84824|Fc receptor-like A##NM_001184873|FCRLA|84824|Fc receptor-like A##NM_032738|FCRLA|84824|Fc receptor-like A##AY670683|FCRLB|127943|Fc receptor-like B##AY670684|FCRLB|127943|Fc receptor-like B##AY670685|FCRLB|127943|Fc receptor-like B##AY670686|FCRLB|127943|Fc receptor-like B##AY670687|FCRLB|127943|Fc receptor-like B##NM_001002901|FCRLB|127943|Fc receptor-like B##AY786314|FCRLB|127943|Fc receptor-like B	0.087846	
chr12	54990375	54990459	reg1019765.p1	6.400	+	CR457003 AY063766 U48707 TSC_hg19_v1_chr12_-_54982398 BC022470 NM_006741 AK123969	-8053	-	TSC_hg19_v1_chr12_+_54955248 BX538092 NM_001165975 AK302931 AK126899 AJ401609	-35120	+	TSC_hg19_v1_chr12_+_54943386 BC032226 AB209200 AK302899 U86078	-47007	+	CU686745 CU687522 AF238867 BC069317 NM_033277 BC062217	38234	-	AY590150 AF144011 BC062682 BC069108 NM_053283 EF503687 EF503688 EF503689	51788	-	NM_058173 AF414087 AY359062 BC111421 AY651259	257915	+	CR457003|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AY063766|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##U48707|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##BC022470|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_006741|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AK123969|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##BX538092|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##NM_001165975|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AK302931|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AK126899|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AJ401609|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##BC032226|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AB209200|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AK302899|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##U86078|PDE1B|5153|phosphodiesterase 1B, calmodulin-dependent##AF238867|LACRT|90070|lacritin##BC069317|LACRT|90070|lacritin##NM_033277|LACRT|90070|lacritin##BC062217|LACRT|90070|lacritin##AY590150|DCD|117159|dermcidin##AF144011|DCD|117159|dermcidin##BC062682|DCD|117159|dermcidin##BC069108|DCD|117159|dermcidin##NM_053283|DCD|117159|dermcidin##EF503687|DCD|117159|dermcidin##EF503688|DCD|117159|dermcidin##EF503689|DCD|117159|dermcidin##NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1	0.999951	CTCF.p2:-2:1.000
chr17	57930685	57930797	reg1019774.p1	6.400	+	TSC_hg19_v1_chr17_+_57915291 AK310806	-15435	+	TSC_hg19_v1_chr17_+_57785080 AK293664	-145668	+	AK294854 TSC_hg19_v1_chr17_+_57785025 AF214006 AX775965	-145706	+	AK024096 AK298492 AK301312 BC000258 AK022771 AK315172 NM_001193609 NM_001193610 NM_001193611 NM_001193612 NM_001193613 NM_016261	39450	-	NM_003161 BC036033 TSC_hg19_v1_chr17_+_57970481 AK293247	39721	+	TSC_hg19_v1_chr17_+_57970492 AK300202 AK312875 BC053365 M60724 AB384946 CU690966 AK297147	39801	+	AK293664|VMP1|81671|vacuole membrane protein 1##AK294854|VMP1|81671|vacuole membrane protein 1##AF214006|VMP1|81671|vacuole membrane protein 1##AX775965|VMP1|81671|vacuole membrane protein 1##AK024096|TUBD1|51174|tubulin, delta 1##AK298492|TUBD1|51174|tubulin, delta 1##AK301312|TUBD1|51174|tubulin, delta 1##BC000258|TUBD1|51174|tubulin, delta 1##AK022771|TUBD1|51174|tubulin, delta 1##AK315172|TUBD1|51174|tubulin, delta 1##NM_001193609|TUBD1|51174|tubulin, delta 1##NM_001193610|TUBD1|51174|tubulin, delta 1##NM_001193611|TUBD1|51174|tubulin, delta 1##NM_001193612|TUBD1|51174|tubulin, delta 1##NM_001193613|TUBD1|51174|tubulin, delta 1##NM_016261|TUBD1|51174|tubulin, delta 1##NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK300202|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK312875|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC053365|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##M60724|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK297147|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	0.026984	
chr13	21872109	21872238	reg1007864.p3	6.399	+	TSC_hg19_v1_chr13_+_21750834 BC068492 BC023616 BC000002	-121373	+	CU690596 TSC_hg19_v1_chr13_-_21750699 AF361358 AK090584 AK314864 AX746521 BC013418 AK307976 BC048988 NM_001166017 NM_145061	-121485	-	NM_024026	-121802	+	TSC_hg19_v1_chr13_+_21872311 AK093279	110	+	CU686599 TSC_hg19_v1_chr13_-_22033417 BC110517 AK295804 BC050367 AK299354	161217	-	TSC_hg19_v1_chr13_-_22033486 AX721051	161309	-	BC068492|MRP63|78988|mitochondrial ribosomal protein 63##BC023616|MRP63|78988|mitochondrial ribosomal protein 63##BC000002|MRP63|78988|mitochondrial ribosomal protein 63##AF361358|SKA3|221150|spindle and kinetochore associated complex subunit 3##AK090584|SKA3|221150|spindle and kinetochore associated complex subunit 3##AK314864|SKA3|221150|spindle and kinetochore associated complex subunit 3##BC013418|SKA3|221150|spindle and kinetochore associated complex subunit 3##AK307976|SKA3|221150|spindle and kinetochore associated complex subunit 3##BC048988|SKA3|221150|spindle and kinetochore associated complex subunit 3##NM_001166017|SKA3|221150|spindle and kinetochore associated complex subunit 3##NM_145061|SKA3|221150|spindle and kinetochore associated complex subunit 3##NM_024026|MRP63|78988|mitochondrial ribosomal protein 63##AK093279|MIPEPP3|650794|mitochondrial intermediate peptidase pseudogene 3##BC110517|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK295804|ZDHHC20|253832|zinc finger, DHHC-type containing 20##BC050367|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK299354|ZDHHC20|253832|zinc finger, DHHC-type containing 20	0.0	
chr14	24809159	24809339	reg1026090.p1	6.399	+	AF156884 AY453693 AY494982 AY494983 CU692020 TSC_hg19_v1_chr14_-_24809197 BC062584 AK296309 BC041668 AK296140 AK075275 NM_006871	-110	-	BX248285 BC027943 AK122714 AK126468 NM_001198568 NM_001198592 NM_139247 TSC_hg19_v1_chr14_-_24804278	-4984	-	NM_181657	-26937	+	AK310445 EU887632 EU887633 EU887634 NM_001136022 NM_001198967	26895	+	NM_001198965 NM_004554 BC037735 AK293185 TSC_hg19_v1_chr14_+_24837389 AK311078 AK311425 L41066 BC053855 AB527875 EU446638 EU887641 EU887642 EU887643	28136	+	AK302271 NM_001198966 AK310433 EU887644 EU887645 EU887646 EU887647 EU887648 EU887649 AK300450	29126	+	AF156884|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY453693|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494982|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494983|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC062584|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296309|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC041668|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296140|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK075275|RIPK3|11035|receptor-interacting serine-threonine kinase 3##NM_006871|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BX248285|ADCY4|196883|adenylate cyclase 4##BC027943|ADCY4|196883|adenylate cyclase 4##AK122714|ADCY4|196883|adenylate cyclase 4##AK126468|ADCY4|196883|adenylate cyclase 4##NM_001198568|ADCY4|196883|adenylate cyclase 4##NM_001198592|ADCY4|196883|adenylate cyclase 4##NM_139247|ADCY4|196883|adenylate cyclase 4##NM_181657|LTB4R|1241|leukotriene B4 receptor##AK310445|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887632|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887633|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887634|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001136022|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198967|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198965|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_004554|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##BC037735|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK293185|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK311078|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK311425|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##L41066|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##BC053855|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU446638|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887641|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887642|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887643|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK302271|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198966|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK310433|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887644|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887645|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887646|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887647|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887648|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887649|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK300450|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4	0.0	
chr4	104855445	104855591	reg1020228.p1	6.399	+	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-214618	-	AB527246 AB209996 TSC_hg19_v1_chr4_-_104119535 AK290362 NM_001813 Z15005	-735998	-	AK128463 TSC_hg19_v1_chr4_-_104020987 AF164790 AK023323 AK290160 AK291335 AK300626 BC037277 BC095414 AY358841 BC001953 NM_020139	-834518	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	556964	-	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	560535	-	BX640738 NM_017628	1211513	+	BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##AB209996|CENPE|1062|centromere protein E, 312kDa##AK290362|CENPE|1062|centromere protein E, 312kDa##NM_001813|CENPE|1062|centromere protein E, 312kDa##Z15005|CENPE|1062|centromere protein E, 312kDa##AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##AK127778|CXXC4|80319|CXXC finger protein 4##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2	0.999682	CTCF.p2:26:1.000
chr6	157355730	157355848	reg1023358.p1	6.399	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-255914	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-256505	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-256564	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	388795	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	389428	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	446750	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	0.024351	
chr6	158447380	158447499	reg1019846.p1	6.399	+	NM_001178088 TSC_hg19_v1_chr6_+_158438191 BX648749 AB002346 AF039945	-9267	+	TSC_hg19_v1_chr6_+_158402928 AY152396 AB384465	-44430	+	TSC_hg19_v1_chr6_+_158402923 AF318616	-44520	+	BC048335 BC001705 BC028594 BX648104 TSC_hg19_v1_chr6_-_158589279	141801	-	TSC_hg19_v1_chr6_-_158589295 AK027823 BC060795 NM_032861	141861	-	NM_207118 TSC_hg19_v1_chr6_+_158589381 AK055106 BC056906 AJ634743	141952	+	NM_001178088|SYNJ2|8871|synaptojanin 2##BX648749|SYNJ2|8871|synaptojanin 2##AB002346|SYNJ2|8871|synaptojanin 2##AF039945|SYNJ2|8871|synaptojanin 2##AY152396|SYNJ2|8871|synaptojanin 2##AF318616|SYNJ2|8871|synaptojanin 2##BC048335|SERAC1|84947|serine active site containing 1##BC001705|SERAC1|84947|serine active site containing 1##BC028594|SERAC1|84947|serine active site containing 1##BX648104|SERAC1|84947|serine active site containing 1##AK027823|SERAC1|84947|serine active site containing 1##BC060795|SERAC1|84947|serine active site containing 1##NM_032861|SERAC1|84947|serine active site containing 1##NM_207118|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AK055106|GTF2H5|404672|general transcription factor IIH, polypeptide 5##BC056906|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AJ634743|GTF2H5|404672|general transcription factor IIH, polypeptide 5	0.0	
chr9	140616510	140616615	reg1022779.p1	6.399	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-103095	+	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	-103119	+	TSC_hg19_v1_chr9_-_140513273 BC011781 AF267857 NM_032937	-103269	-	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	21967	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	155672	+	TSC_hg19_v1_chr9_+_140918045 AB209467	301512	+	BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC011781|C9orf37|85026|chromosome 9 open reading frame 37##AF267857|C9orf37|85026|chromosome 9 open reading frame 37##NM_032937|C9orf37|85026|chromosome 9 open reading frame 37##AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit	0.749388	CTCF.p2:-20:0.749
chr10	34944631	34944772	reg1022495.p2	6.398	+	TSC_hg19_v1_chr10_-_33623996 BX648025	-1320703	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1320887	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	-1321248	-	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	159450	-	AK310225 AK300491 NM_001198778 NM_001198779	418511	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	434571	-	BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2	0.871942	CTCF.p2:-12:0.872
chr1	21596814	21596930	reg1018975.p1	6.398	+	TSC_hg19_v1_chr1_-_21503387 NM_001198801 NM_001198802	-93502	-	TSC_hg19_v1_chr1_-_21503344 BC072413 AB209119	-93548	-	BC030578 NM_001198803	-95633	-	D43698 TSC_hg19_v1_chr1_-_21606025 BX648351 NM_001113347	9211	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	19836	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	20062	-	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##D43698|ECE1|1889|endothelin converting enzyme 1##BX648351|ECE1|1889|endothelin converting enzyme 1##NM_001113347|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1	0.919638	CTCF.p2:-4:0.908
chr16	10275323	10275503	reg1001304.p3	6.398	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-1089810	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-1089873	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-1218118	-	BC143273 U09002 NM_001134408	420	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	775	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	1264	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.0	
chrX	39304726	39304871	reg1022511.p1	6.398	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-641258	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-641338	+	BC008908 NM_021242	-641726	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	651894	-	BC114220 NM_001123383 NM_001123384	731783	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	1135388	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.956975	CTCF.p2:-4:0.957
chr11	72158105	72158256	reg1025058.p1	6.397	+	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	-12530	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	-12604	-	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	-12725	-	TSC_hg19_v1_chr11_-_72353458 AY495089 AK131525 AK092278 AX747449 NM_001143839 NM_001243784	195299	-	AY495087 NM_001146209	221927	-	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	227273	-	AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK131525|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK092278|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001143839|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001243784|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	0.609704	CTCF.p2:5:0.594
chr2	204516149	204516312	reg1022653.p2	6.397	+	TSC_hg19_v1_chr2_-_204399987 BC032486 AK096270 AB053311 AJ584699 AY494951 AY523977 AY523978 NM_203365 NM_213589	-116084	-	TSC_hg19_v1_chr2_+_204193004 NM_005759 AK311427 AK302853 AK294429 AK299824 AK316000 BC001439 AB590360 AF260261 BT009920 CU674706 DQ890735 DQ893907	-323095	+	TSC_hg19_v1_chr2_+_204103740 AF183412 AK297082 BC093022 BC033752 BC020616 AL832998 AY359068 AK307931 DQ890918 DQ894068 DQ894069 CU676580	-412509	+	NM_001243077 NM_001243078 NM_006139 AJ517504 AK313313 J02988 TSC_hg19_v1_chr2_+_204571361 AK303421	55050	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	55169	+	BC070162 AF414120 NM_001037631 NM_005214 AK313732 BC069566 BC074893 BC074842 AB590653 AF486806 AY209009 AY792514 AY999702 DQ785106 L15006	216357	+	AK096270|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AB053311|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AJ584699|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY494951|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523977|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523978|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_203365|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_213589|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_005759|ABI2|10152|abl-interactor 2##AK302853|ABI2|10152|abl-interactor 2##AK294429|ABI2|10152|abl-interactor 2##AK299824|ABI2|10152|abl-interactor 2##AK316000|ABI2|10152|abl-interactor 2##BC001439|ABI2|10152|abl-interactor 2##AF260261|ABI2|10152|abl-interactor 2##BT009920|ABI2|10152|abl-interactor 2##DQ890735|ABI2|10152|abl-interactor 2##DQ893907|ABI2|10152|abl-interactor 2##AF183412|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK297082|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC093022|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC033752|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC020616|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AL832998|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AY359068|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK307931|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ890918|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ894068|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ894069|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##NM_001243077|CD28|940|CD28 molecule##NM_001243078|CD28|940|CD28 molecule##NM_006139|CD28|940|CD28 molecule##AJ517504|CD28|940|CD28 molecule##AK313313|CD28|940|CD28 molecule##J02988|CD28|940|CD28 molecule##AK303421|CD28|940|CD28 molecule##BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule##BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	0.018536	
chr2	220076392	220076482	reg1019338.p1	6.397	+	TSC_hg19_v1_chr2_+_220071949 AK074571	-4483	+	TSC_hg19_v1_chr2_+_220071528 AK091345 AX746924 AK292622 AK293714 BC018415 NM_138802	-4863	+	TSC_hg19_v1_chr2_+_220043005 BC002420	-33373	+	AF076775 DQ891876 DQ895063 CU674272 TSC_hg19_v1_chr2_-_220083433	6977	-	AK057026 BC000559 AJ289233 AK303230 TSC_hg19_v1_chr2_-_220083681	7237	-	TSC_hg19_v1_chr2_-_220083702 NM_005689	7268	-	AK074571|ZFAND2B|130617|zinc finger, AN1-type domain 2B##AK091345|ZFAND2B|130617|zinc finger, AN1-type domain 2B##AK292622|ZFAND2B|130617|zinc finger, AN1-type domain 2B##AK293714|ZFAND2B|130617|zinc finger, AN1-type domain 2B##BC018415|ZFAND2B|130617|zinc finger, AN1-type domain 2B##NM_138802|ZFAND2B|130617|zinc finger, AN1-type domain 2B##BC002420|FAM134A|79137|family with sequence similarity 134, member A##AF076775|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6##DQ891876|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6##DQ895063|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6##AK057026|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6##BC000559|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6##AJ289233|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6##AK303230|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6##NM_005689|ABCB6|10058|ATP-binding cassette, sub-family B (MDR/TAP), member 6	0.157894	
chrX	102966527	102966632	reg1017642.p1	6.397	+	AK130867 BC029575 NM_182541	-743	+	TSC_hg19_v1_chrX_-_102942976 AK302083 AK056012 NM_001142419 NM_001142420 NM_001142421 NM_001142422 NM_001142427 NM_001142428 NM_001142431 NM_001142432	-23553	-	BC056899 AF167174 AF100620 D14812 AB050778 TSC_hg19_v1_chrX_-_102941628 AK126115 AK223504 BC093013 NM_001142418 NM_001142423 NM_001142424 NM_001142425 NM_001142426 NM_001142429 NM_001142430 NM_012286	-24916	-	AK309010 NM_001024452 NM_001172285	16972	-	AK292728 NM_001128834	64856	+	NM_000533 NM_199478 TSC_hg19_v1_chrX_+_103031767 BC002665	65186	+	AK130867|TMEM31|203562|transmembrane protein 31##BC029575|TMEM31|203562|transmembrane protein 31##NM_182541|TMEM31|203562|transmembrane protein 31##AK302083|MORF4L2|9643|mortality factor 4 like 2##AK056012|MORF4L2|9643|mortality factor 4 like 2##NM_001142419|MORF4L2|9643|mortality factor 4 like 2##NM_001142420|MORF4L2|9643|mortality factor 4 like 2##NM_001142421|MORF4L2|9643|mortality factor 4 like 2##NM_001142422|MORF4L2|9643|mortality factor 4 like 2##NM_001142427|MORF4L2|9643|mortality factor 4 like 2##NM_001142428|MORF4L2|9643|mortality factor 4 like 2##NM_001142431|MORF4L2|9643|mortality factor 4 like 2##NM_001142432|MORF4L2|9643|mortality factor 4 like 2##BC056899|MORF4L2|9643|mortality factor 4 like 2##AF167174|MORF4L2|9643|mortality factor 4 like 2##AF100620|MORF4L2|9643|mortality factor 4 like 2##D14812|MORF4L2|9643|mortality factor 4 like 2##AB050778|MORF4L2|9643|mortality factor 4 like 2##AK126115|MORF4L2|9643|mortality factor 4 like 2##AK223504|MORF4L2|9643|mortality factor 4 like 2##BC093013|MORF4L2|9643|mortality factor 4 like 2##NM_001142418|MORF4L2|9643|mortality factor 4 like 2##NM_001142423|MORF4L2|9643|mortality factor 4 like 2##NM_001142424|MORF4L2|9643|mortality factor 4 like 2##NM_001142425|MORF4L2|9643|mortality factor 4 like 2##NM_001142426|MORF4L2|9643|mortality factor 4 like 2##NM_001142429|MORF4L2|9643|mortality factor 4 like 2##NM_001142430|MORF4L2|9643|mortality factor 4 like 2##NM_012286|MORF4L2|9643|mortality factor 4 like 2##AK309010|GLRA4|441509|glycine receptor, alpha 4##NM_001024452|GLRA4|441509|glycine receptor, alpha 4##NM_001172285|GLRA4|441509|glycine receptor, alpha 4##AK292728|PLP1|5354|proteolipid protein 1##NM_001128834|PLP1|5354|proteolipid protein 1##NM_000533|PLP1|5354|proteolipid protein 1##NM_199478|PLP1|5354|proteolipid protein 1##BC002665|PLP1|5354|proteolipid protein 1	0.809737	CTCF.p2:0:0.810
chr18	52942387	52942520	reg1021666.p2	6.396	+	AF273051 TSC_hg19_v1_chr18_-_52626693 BC029508 NM_025214	-315766	-	AK058097 NM_001143829	-317175	-	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	-446715	+	FR748222 NM_001243236	27329	-	M74718 FR748220 FR748221 AK300038 NM_001243234 NM_001243235	46549	-	FR748209 M74720 AB209741 TSC_hg19_v1_chr18_-_53068920 AK300636	126385	-	AF273051|CCDC68|80323|coiled-coil domain containing 68##BC029508|CCDC68|80323|coiled-coil domain containing 68##NM_025214|CCDC68|80323|coiled-coil domain containing 68##AK058097|CCDC68|80323|coiled-coil domain containing 68##NM_001143829|CCDC68|80323|coiled-coil domain containing 68##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family##FR748222|TCF4|6925|transcription factor 4##NM_001243236|TCF4|6925|transcription factor 4##M74718|TCF4|6925|transcription factor 4##FR748220|TCF4|6925|transcription factor 4##FR748221|TCF4|6925|transcription factor 4##AK300038|TCF4|6925|transcription factor 4##NM_001243234|TCF4|6925|transcription factor 4##NM_001243235|TCF4|6925|transcription factor 4##FR748209|TCF4|6925|transcription factor 4##AB209741|TCF4|6925|transcription factor 4##AK300636|TCF4|6925|transcription factor 4	0.804478	CTCF.p2:24:0.804
chr20	10450289	10450409	reg1020382.p1	6.396	+	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-34373	+	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	-35510	-	AF221993 NM_018848	-37780	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	203855	-	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	204220	-	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1421100	+	BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3	0.034047	
chr2	117267800	117267893	reg1017946.p1	6.396	+	NM_001178034 DQ857322 AK296490 NM_001004360 AY387785 AB040925 AB385475 DQ857323	-1348185	+	NM_001178037 DQ857321	-1445556	+	AK055256 BC038514 NM_001178036	-2048680	+	NM_006773 TSC_hg19_v1_chr2_+_118572276 BC024739	1304422	+	AK001467 TSC_hg19_v1_chr2_+_118572283	1304437	+	TSC_hg19_v1_chr2_+_118572298 BC003360 BC001238	1304471	+	NM_001178034|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857322|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK296490|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001004360|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AY387785|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AB040925|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857323|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178037|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857321|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_006773|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC024739|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##AK001467|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC003360|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC001238|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	0.316734	CTCF.p2:-3:0.317
chr2	139603938	139604037	reg1022087.p1	6.396	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-66181	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-344497	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-344594	+	TSC_hg19_v1_chr2_-_142888540 AK054663	3284569	-	AF176832 NM_018557	3285282	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	4031219	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.698493	CTCF.p2:0:0.698
chr22	39889469	39889579	reg1021460.p1	6.396	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	-6234	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	-35988	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	-36204	+	TSC_hg19_v1_chr22_+_39898257 NM_019008	8741	+	TSC_hg19_v1_chr22_+_39898332 AL834205	8786	+	TSC_hg19_v1_chr22_+_39898363 AL365515	8835	+	NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_019008|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL834205|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL365515|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like	0.986072	CTCF.p2:-5:0.986
chr16	84208973	84209083	reg1020846.p1	6.395	+	NM_178452 TSC_hg19_v1_chr16_+_84178912 BX648657 AL833327 AL833328 AL833336 AK057238 AK310961 BC024009	-30136	+	TSC_hg19_v1_chr16_-_84178781 AK074878 AK299798 BC018084 NM_001146051 NM_031463	-30268	-	TSC_hg19_v1_chr16_+_84150646 BC052334	-58377	+	TSC_hg19_v1_chr16_-_84220644 AK304739 L39059 AB209594 AK299060 AK097031 AK299347 BC028131 AK304261 AK315982 NM_001243156 NM_001243157 NM_001243158 NM_001243159 NM_001243160 NM_005679 NM_139353	11596	-	NM_001145400 NM_139174 AK093046 AX747882 AF447586 BC033491 AK315171 CU689630	15750	+	BC109203 BC008969 NM_172347	64301	-	NM_178452|DNAAF1|123872|dynein, axonemal, assembly factor 1##BX648657|DNAAF1|123872|dynein, axonemal, assembly factor 1##AL833327|DNAAF1|123872|dynein, axonemal, assembly factor 1##AL833328|DNAAF1|123872|dynein, axonemal, assembly factor 1##AL833336|DNAAF1|123872|dynein, axonemal, assembly factor 1##AK057238|DNAAF1|123872|dynein, axonemal, assembly factor 1##AK310961|DNAAF1|123872|dynein, axonemal, assembly factor 1##BC024009|DNAAF1|123872|dynein, axonemal, assembly factor 1##AK074878|HSDL1|83693|hydroxysteroid dehydrogenase like 1##AK299798|HSDL1|83693|hydroxysteroid dehydrogenase like 1##BC018084|HSDL1|83693|hydroxysteroid dehydrogenase like 1##NM_001146051|HSDL1|83693|hydroxysteroid dehydrogenase like 1##NM_031463|HSDL1|83693|hydroxysteroid dehydrogenase like 1##BC052334|LOC729887|729887|uncharacterized LOC729887##AK304739|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##L39059|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AB209594|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK299060|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK097031|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK299347|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##BC028131|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK304261|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##AK315982|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243156|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243157|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243158|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243159|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001243160|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_005679|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_139353|TAF1C|9013|TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa##NM_001145400|ADAD2|161931|adenosine deaminase domain containing 2##NM_139174|ADAD2|161931|adenosine deaminase domain containing 2##AK093046|ADAD2|161931|adenosine deaminase domain containing 2##AF447586|ADAD2|161931|adenosine deaminase domain containing 2##BC033491|ADAD2|161931|adenosine deaminase domain containing 2##AK315171|ADAD2|161931|adenosine deaminase domain containing 2##BC109203|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##BC008969|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##NM_172347|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4	0.0	
chr2	163010257	163010381	reg1024553.p1	6.395	+	NM_002054	-1406	-	BC065265 NM_001935 TSC_hg19_v1_chr2_-_162931062	-79263	-	TSC_hg19_v1_chr2_-_162930636 AK314798	-79687	-	BC026250 AF007822 U76833 AK315448 AK309260 AK297118 NM_004460 U09278	89641	-	CU692330 BC111750 AY017378 AF095844 NM_022168 BC078180 TSC_hg19_v1_chr2_-_163175195 BC046208 AK292941 AK314611	164764	-	NM_012198 TSC_hg19_v1_chr2_+_163200610	190279	+	NM_002054|GCG|2641|glucagon##BC065265|DPP4|1803|dipeptidyl-peptidase 4##NM_001935|DPP4|1803|dipeptidyl-peptidase 4##AK314798|DPP4|1803|dipeptidyl-peptidase 4##BC026250|FAP|2191|fibroblast activation protein, alpha##AF007822|FAP|2191|fibroblast activation protein, alpha##U76833|FAP|2191|fibroblast activation protein, alpha##AK315448|FAP|2191|fibroblast activation protein, alpha##AK309260|FAP|2191|fibroblast activation protein, alpha##AK297118|FAP|2191|fibroblast activation protein, alpha##NM_004460|FAP|2191|fibroblast activation protein, alpha##U09278|FAP|2191|fibroblast activation protein, alpha##BC111750|IFIH1|64135|interferon induced with helicase C domain 1##AY017378|IFIH1|64135|interferon induced with helicase C domain 1##AF095844|IFIH1|64135|interferon induced with helicase C domain 1##NM_022168|IFIH1|64135|interferon induced with helicase C domain 1##BC078180|IFIH1|64135|interferon induced with helicase C domain 1##BC046208|IFIH1|64135|interferon induced with helicase C domain 1##AK292941|IFIH1|64135|interferon induced with helicase C domain 1##AK314611|IFIH1|64135|interferon induced with helicase C domain 1##NM_012198|GCA|25801|grancalcin, EF-hand calcium binding protein	0.140852	
chr4	7337640	7337739	reg1021578.p2	6.395	+	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-143294	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-267888	-	AF298592 DQ891523 DQ894713 TSC_hg19_v1_chr4_-_7069792 AK098475 AK301695 AK312882 BC024242 NM_025196	-267912	-	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	98967	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	603699	-	TSC_hg19_v1_chr4_-_8073714 AK094798	736027	-	NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AF298592|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ891523|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ894713|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK098475|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK301695|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK312882|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##BC024242|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##NM_025196|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2	0.981565	CTCF.p2:0:0.982
chr8	145634711	145634853	reg1022732.p1	6.395	+	NM_013291 TSC_hg19_v1_chr8_-_145634757	-30	-	CU677871 DQ893479 DQ896356 AB590264 AK293601 TSC_hg19_v1_chr8_-_145634711 BC028197 BC017232 U37012	-153	-	TSC_hg19_v1_chr8_+_145597750 BC101659 BC143322 BC143326	-37022	+	TSC_hg19_v1_chr8_-_145638966 BC001688 AK056900 AK000489	4182	-	AK000695 TSC_hg19_v1_chr8_-_145641899 BC033807 AK000334 NM_017767	7094	-	AK290563 TSC_hg19_v1_chr8_-_145642229	7446	-	NM_013291|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa##DQ893479|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa##DQ896356|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa##AK293601|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa##BC028197|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa##BC017232|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa##U37012|CPSF1|29894|cleavage and polyadenylation specific factor 1, 160kDa##BC101659|ADCK5|203054|aarF domain containing kinase 5##BC143322|ADCK5|203054|aarF domain containing kinase 5##BC143326|ADCK5|203054|aarF domain containing kinase 5##BC001688|SLC39A4|55630|solute carrier family 39 (zinc transporter), member 4##AK056900|SLC39A4|55630|solute carrier family 39 (zinc transporter), member 4##AK000489|SLC39A4|55630|solute carrier family 39 (zinc transporter), member 4##AK000695|SLC39A4|55630|solute carrier family 39 (zinc transporter), member 4##BC033807|SLC39A4|55630|solute carrier family 39 (zinc transporter), member 4##AK000334|SLC39A4|55630|solute carrier family 39 (zinc transporter), member 4##NM_017767|SLC39A4|55630|solute carrier family 39 (zinc transporter), member 4##AK290563|SLC39A4|55630|solute carrier family 39 (zinc transporter), member 4	0.0	
chrX	6987149	6987259	reg1023975.p1	6.395	+	AF167078 AF167079 NM_016379	-534046	-	AK055471 BC034018 NM_181332	-840524	-	AB033086 AF376803 AX773938 NM_020742	-841317	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	78747	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	78988	-	NM_000351 M16505 J04964 AK314034	150297	+	AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S	0.939017	CTCF.p2:6:0.939
chr10	18199246	18199344	reg1021850.p1	6.394	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	-100902	+	NM_001098844 BC157856	-158074	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	-347892	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	41534	+	NM_201593 NM_201596 NM_201597 S60415 BC136409 AF137376 AF423191 AY393860 AY675091 AK296471 AK311694 AK307526 NM_001167945 NM_201571 NM_201572 AK293837	230412	+	NM_000724 AB208917 U95019	350345	+	J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	0.758397	CTCF.p2:-10:0.758
chr9	100880314	100880428	reg1018960.p1	6.394	+	TSC_hg19_v1_chr9_+_100819020 NM_018946 AK316608 BC000008 AK001659 BC019315 AF257466 CU676426 DQ892167 DQ895361	-61356	+	TSC_hg19_v1_chr9_+_100745672 Y07569	-134644	+	TSC_hg19_v1_chr9_+_100745652 BC019658 Y07570 BC013003	-134719	+	TSC_hg19_v1_chr9_-_100881503 AB529155 DQ893293 DQ896623 AF220130 AF220131 D50919 NM_014788 NM_033219 BC006333 NM_033220 AK292825	1114	-	TSC_hg19_v1_chr9_-_100881526 AK055833	1173	-	NM_003389	54802	-	NM_018946|NANS|54187|N-acetylneuraminic acid synthase##AK316608|NANS|54187|N-acetylneuraminic acid synthase##BC000008|NANS|54187|N-acetylneuraminic acid synthase##AK001659|NANS|54187|N-acetylneuraminic acid synthase##BC019315|NANS|54187|N-acetylneuraminic acid synthase##AF257466|NANS|54187|N-acetylneuraminic acid synthase##DQ892167|NANS|54187|N-acetylneuraminic acid synthase##DQ895361|NANS|54187|N-acetylneuraminic acid synthase##Y07569|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##BC019658|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##Y07570|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##BC013003|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##DQ893293|TRIM14|9830|tripartite motif containing 14##DQ896623|TRIM14|9830|tripartite motif containing 14##AF220130|TRIM14|9830|tripartite motif containing 14##AF220131|TRIM14|9830|tripartite motif containing 14##D50919|TRIM14|9830|tripartite motif containing 14##NM_014788|TRIM14|9830|tripartite motif containing 14##NM_033219|TRIM14|9830|tripartite motif containing 14##BC006333|TRIM14|9830|tripartite motif containing 14##NM_033220|TRIM14|9830|tripartite motif containing 14##AK292825|TRIM14|9830|tripartite motif containing 14##AK055833|TRIM14|9830|tripartite motif containing 14##NM_003389|CORO2A|7464|coronin, actin binding protein, 2A	0.0	
chr14	45896031	45896153	reg1020868.p1	6.393	+	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-173446	-	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	-173725	-	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-290903	+	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	1224891	-	BC028193 NM_182830	1916323	-	AK309211 NM_001113498	2248064	-	AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	0.999423	CTCF.p2:-15:0.999
chr17	73266517	73266654	reg1023479.p1	6.393	+	DQ890815 DQ893971 CU689726 BC033759 NM_001242500 NM_001242501	-285	-	AK301895 AK302278 NM_001172703 NM_001172704	-8143	-	BC050641 TSC_hg19_v1_chr17_+_73258009	-8585	+	TSC_hg19_v1_chr17_-_73267251 AK300711	579	-	TSC_hg19_v1_chr17_-_73267265 AF225422 NM_001242498 NM_020679	729	-	BC001075 BC005120 TSC_hg19_v1_chr17_-_73285471 AL833387	18887	-	DQ890815|MIF4GD|57409|MIF4G domain containing##DQ893971|MIF4GD|57409|MIF4G domain containing##BC033759|MIF4GD|57409|MIF4G domain containing##NM_001242500|MIF4GD|57409|MIF4G domain containing##NM_001242501|MIF4GD|57409|MIF4G domain containing##AK301895|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK302278|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##NM_001172703|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##NM_001172704|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##BC050641|MRPS7|51081|mitochondrial ribosomal protein S7##AK300711|MIF4GD|57409|MIF4G domain containing##AF225422|MIF4GD|57409|MIF4G domain containing##NM_001242498|MIF4GD|57409|MIF4G domain containing##NM_020679|MIF4GD|57409|MIF4G domain containing##BC001075|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC005120|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AL833387|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	0.430747	CTCF.p2:16:0.431
chr1	84326238	84326342	reg1020524.p2	6.393	+	AK097722 TSC_hg19_v1_chr1_-_84326308	-22	-	AF104266 AF104938 AF104939 NM_012302	-2060209	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	-2554363	+	TSC_hg19_v1_chr1_-_84326677 BC036594	386	-	AK126792 BC048970 BC032829 TSC_hg19_v1_chr1_-_84464848 BC060878 BC028350 NM_024686	138506	-	TSC_hg19_v1_chr1_+_84543744 AK074904 BC037304 BC035058 NM_002731 NM_207578 AK314550 BC016285 M34181 AB463197 AM392526 AM393233 AM393317 AM393497 CU677593 EU832783 GQ129404 AB451239 AB451364	217546	+	AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##AK074904|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BC035058|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_002731|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_207578|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK314550|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BC016285|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##M34181|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM392526|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM393233|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM393317|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM393497|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##EU832783|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##GQ129404|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AB451239|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AB451364|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	0.908317	CTCF.p2:3:0.908
chr18	51796814	51796916	reg1020322.p1	6.393	+	NM_007195 TSC_hg19_v1_chr18_+_51795943 AK301578 AF140501 BC032617 BC032662 AL136670 AF245438 AK093688 AB463184 AM392978 DQ890893 DQ896811 CU689468	-925	+	TSC_hg19_v1_chr18_-_51751035 AF072242 NM_003927 NM_015832	-45788	-	TSC_hg19_v1_chr18_-_51750997 BC032638	-45900	-	AB528241 AF480305 NM_139171	84077	-	BX640877 NM_173529	88305	+	AK096425 NM_173629	461524	+	NM_007195|POLI|11201|polymerase (DNA directed) iota##AK301578|POLI|11201|polymerase (DNA directed) iota##AF140501|POLI|11201|polymerase (DNA directed) iota##BC032617|POLI|11201|polymerase (DNA directed) iota##BC032662|POLI|11201|polymerase (DNA directed) iota##AL136670|POLI|11201|polymerase (DNA directed) iota##AF245438|POLI|11201|polymerase (DNA directed) iota##AK093688|POLI|11201|polymerase (DNA directed) iota##AM392978|POLI|11201|polymerase (DNA directed) iota##DQ890893|POLI|11201|polymerase (DNA directed) iota##DQ896811|POLI|11201|polymerase (DNA directed) iota##AF072242|MBD2|8932|methyl-CpG binding domain protein 2##NM_003927|MBD2|8932|methyl-CpG binding domain protein 2##NM_015832|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2##AF480305|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_139171|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##BX640877|C18orf54|162681|chromosome 18 open reading frame 54##NM_173529|C18orf54|162681|chromosome 18 open reading frame 54##AK096425|C18orf26|284254|chromosome 18 open reading frame 26##NM_173629|C18orf26|284254|chromosome 18 open reading frame 26	0.221939	CTCF.p2:20:0.222
chr5	73936380	73936548	reg1022226.p1	6.393	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	-1	-	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	-827114	+	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	-1014479	+	AK096578 NM_003633	784	-	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	44544	+	TSC_hg19_v1_chr5_+_73981057 AK130375 BC017378 CU675968 BT009919 M19735	44624	+	AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)##AK130375|HEXB|3074|hexosaminidase B (beta polypeptide)##BC017378|HEXB|3074|hexosaminidase B (beta polypeptide)##BT009919|HEXB|3074|hexosaminidase B (beta polypeptide)##M19735|HEXB|3074|hexosaminidase B (beta polypeptide)	0.0	
chrX	101725250	101725384	reg1027293.p1	6.393	+	BC015020 AJ277526 AK308255 NM_001099686 NM_022053	-30429	-	NM_001099686 NM_022053 AK308255 AJ277526 BC015020	-223184	+	NM_001159560 BC092450 AY833564 BC042818 BC106955 NM_001012978	-314444	-	AF086495 BC000183 AK311771 D82345 NM_021992	46352	-	AK096692 NM_001168479 NM_001168480 NM_001168485 TSC_hg19_v1_chrX_+_101854110 BC064983 NM_001199818	128868	+	NM_001168478 NM_001168482 NM_022838 TSC_hg19_v1_chrX_+_101854450 CR749476 BC022066 BC047679 BC050678	129129	+	BC015020|NXF2|56001|nuclear RNA export factor 2##AJ277526|NXF2|56001|nuclear RNA export factor 2##AK308255|NXF2B|728343|nuclear RNA export factor 2B##NM_001099686|NXF2B|728343|nuclear RNA export factor 2B##NM_022053|NXF2|56001|nuclear RNA export factor 2##NM_001099686|NXF2B|728343|nuclear RNA export factor 2B##NM_022053|NXF2|56001|nuclear RNA export factor 2##AK308255|NXF2B|728343|nuclear RNA export factor 2B##AJ277526|NXF2|56001|nuclear RNA export factor 2##BC015020|NXF2|56001|nuclear RNA export factor 2##NM_001159560|BEX5|340542|brain expressed, X-linked 5##BC092450|BEX5|340542|brain expressed, X-linked 5##AY833564|BEX5|340542|brain expressed, X-linked 5##BC042818|BEX5|340542|brain expressed, X-linked 5##BC106955|BEX5|340542|brain expressed, X-linked 5##NM_001012978|BEX5|340542|brain expressed, X-linked 5##AF086495|TMSB15A|11013|thymosin beta 15a##BC000183|TMSB15A|11013|thymosin beta 15a##AK311771|TMSB15B|286527|thymosin beta 15B##D82345|TMSB15A|11013|thymosin beta 15a##NM_021992|TMSB15A|11013|thymosin beta 15a##AK096692|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001168479|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001168480|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001168485|ARMCX5|64860|armadillo repeat containing, X-linked 5##BC064983|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001199818|ARMCX5-GPRASP2|100528062|ARMCX5-GPRASP2 readthrough##NM_001168478|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_001168482|ARMCX5|64860|armadillo repeat containing, X-linked 5##NM_022838|ARMCX5|64860|armadillo repeat containing, X-linked 5##CR749476|ARMCX5|64860|armadillo repeat containing, X-linked 5##BC022066|ARMCX5|64860|armadillo repeat containing, X-linked 5##BC047679|ARMCX5|64860|armadillo repeat containing, X-linked 5##BC050678|ARMCX5|64860|armadillo repeat containing, X-linked 5	0.783834	CTCF.p2:8:0.784
chr14	106714238	106714368	reg1020607.p1	6.392	+	AY392910 AY392920 AY392921 AY392925 AY392927 AJ309825 AF062121 AF062163 AF062202 Z14212 AY510104 X61023 X61235 AK098108 BC024289 TSC_hg19_v1_chr14_-_106692204 BX640874 AK027379 AK097359 AK127415 AK128635 AK129812 AK130453 BX640622 L29155	-22147	-	AY885219 X61021 Z14181 S55735 AY003795 DQ454455 DQ454409 AF460804 AF460662 AF460801 DQ454397 DQ100714 DQ523908 GQ232944 GQ232956 GQ232797 DQ840786 GQ232980 DQ454544 AY003853 DQ454479 DQ454535 DQ454792 DQ454854 DQ523849 DQ523895 GQ232770 GQ232955 DQ454396 DQ454585 DQ454631 DQ454654 DQ454956 DQ523905 GQ232836 AY003731 AY003716 AY003784 DQ454389 DQ454410 DQ454413 DQ454468 DQ454520 DQ454542 DQ454636 DQ454958 DQ454970 DQ523897 GQ232858 DQ454415 DQ454603 DQ454652 DQ454660 DQ454905 DQ454967 DQ454973 DQ523880 FJ694878 GQ232876 EF407825 EF407842 FJ840131 Z11947 FJ840333 FJ840335 FJ873821 FJ873823 FJ873828 FJ873833 FJ873836 FJ873860 FJ873862 FJ873874 FJ873877 FJ873883 FJ873914 FJ873942 FJ873962 FJ873970 FJ873987 FJ873990 FJ873992 FJ874005 FJ874027 FJ874036 FJ874038 FJ874063 FJ874086 AJ008226 DQ001066 AJ487489 EF091900 EF091901 EF091902 EF175385 EF407838 EF407845 EU814964 FJ694872 JF810262 JF810268 AY393066 AF209735 EU099104 EU099065 EU099101 EU099149 EU099151 EU099184 HM774293 EU099140 EU099070 EU099084 AF158380 EU099130 EU099206 EU099239 EU099243 EU099258 DQ118258 EU090051 DQ524167 EU099262 AF343414 DQ097900 EF555587 EU619977 AF103077 AF103170 AM279610 HM774182 U63212 HM995125 AF035793 AF103329 AF103330 AF103112 AF103182 AJ239379 EF555588 TSC_hg19_v1_chr14_-_106691939 HM774712 HM774761 JN110464 JN110738 JN110826 JN110827 JN110839 JN110903 JN110961 JN110967 JN111019 JN111020 JN111030 JN111035 JN111063 JN111100 JN111115 JN111156 L04329 GQ504855 GQ504939 GQ504944 GQ504967 HM774165 HM774369 HM774525 HM774602 HM774676 HM774690 HM774752 HM774770 HM774773 HM774906 HM775035 HM775044 HQ703986 HQ703987 HQ703995 HQ704026 L26905 L33025 AF103232 JN110697 AF032350 AF032352 AF103105 AJ239387 HM774240 Y14934 Y14935 Y14942 AF103145 EF624220 EU146314 EU146319 EU146378 AB266092 HM996466 DQ100899 AY423192 EF633794 EF633821 HM996470 HM996128 HM995111 AB027443 AF471507 DQ100917 DQ431609 U00572 DQ100693 DQ100840 DQ187606 DQ431612 DQ431613 DQ454842 DQ523995 DQ523997 DQ524047 DQ524062 EF633795 EF633796 HM995012 HM995014 HM995015 HM995084 HM995085 HM995086 HM995089 HM995091 HM995099 HM995100 HM995101 HM995102 HM995103 HM995104 HM995105 HM995106 HM995107 HM995108 HM995109 HM995110 HM995146 HM995147 HM995181 HM995188 HM995201 HM995278 HM995279 HM995280 HM995282 HM995284 HM995285 HM995292 HM995392 HM995530 HM995634 HM995888 HM995892 HM996033 HM996054 HM996072 HM996116 HM996119 HM996127 HM996149 HM996152 HM996173 HM996175 HM996181 HM996217 HM996257 HM996264 HM996267 HM996277 HM996341 HM996536 HM996544 DQ187628 DQ322746 DQ322747 DQ322768 DQ323029 DQ323030 DQ840720 DQ840783 DQ840784 DQ840785 DQ840787 DQ840788 DQ840789 DQ840790 DQ840792 DQ840793 DQ840794 DQ840795 DQ840796 DQ840797 DQ840817 DQ840822 DQ840837 AB453230 AJ245260 AY781807 AY866546 AY866968 AY941949 DQ005279 DQ100697 DQ100798 DQ100815 DQ100893 DQ100898 DQ100901 DQ100925 DQ100947 DQ926257 DQ926305 DQ926590 HQ378339 L19904 U21270 AB063691 AB063759 AB063908 AB066881 AB066972 AB066974 AB066976 AB066979 AB067033 AB363081 AB453231 AF044445 AF052523 AF062162 AF408719 AF455550 AF460967 AF471211 AJ001171 AJ243108 AJ271554 AJ389178 AJ389193 AJ519292 AJ555251 AJ555252 AY033254 AY033285 AY055481 AY466506 AY553643 AY553648 AY577302 AY685252 AY685253 AY846272 AY866763 AY866786 D83686 DQ005290 DQ065626 DQ065630 DQ065668 DQ065694 DQ065704 DQ212512 DQ431611 DQ535452 DQ840743 DQ840747 DQ840748 DQ840749 DQ840750 DQ840751 DQ840752 DQ840812 DQ926167 EF177948 EF177958 EF177959 EF633763 EF633764 EF633797 FJ039786 FJ039789 FJ385383 FJ481087 FJ492943 GU570307 HM152488 HM152500 HM152517 HM152520 HQ689728 S73912 U00508 U06787 U64497 U77372 X99354 Z18317 Z18324 L26898 AJ519295 HM995778 HM995962 AJ519313 HM995777 HM995779 HM995832 HM995882 HM995893 HM995902 HM995903 HM995904 HM995905	-22465	-	U32483 U32956 AF028093 AF028101 AF028111 FN562934 FN562935 FN562936 FN562938 FN562940 FN562941 FN562942 FN562943 FN562969 FN562970 FN562971 FN562972 FN562973 FN562974 FN562976 FN562977 FN562978 FN562979 FN562980 FN562981 FN562982 FN562983 FN564030 AY393108 GU552686 DQ926435 GU552684 GU552688 GU552757 GU552781 GU552690 AY003829 DQ454593 DQ454964 GU552735 FJ839984 FJ873855 FJ873870 FJ873978 FJ874013 HM116198 HM116220 AY003773 AY466515 EF091911 EF175403 EU667600 GQ232801 GQ232810 GQ232870 GQ232884 GQ232937 GQ232940 GU358677 DQ454763 L33029 AB063742 AB063753 AF209885 AJ007326 AY998724 EU099272 AF343408 AM279479 AM279486 AM279587 AM279589 AF103137 AF103300 AF103139 AY640542 HM774290 HM774693 HQ704036 JN111131 JN111139 JN111144 JN111184 JN111186 JN111187 JN111191 JN111197 JN111211 GQ504857 GQ504898 HM774123 HM774196 HM774674 JN110995 AY515008 HM774096 HM774295 HM774432 HM774654 HM774929 JN110663 JN110917 JN110945 JN110948 JN111032 JN111172 L04345 EF177943 FJ385330 FJ385333 FJ385428 HM774077 HM774081 HM774160 HM774325 HM774354 HM774361 HM774528 HM774594 HM774651 HM774665 HM774673 HM774683 HM774694 HM774869 HM774922 HQ704035 AF103230 AF103158 AF103095 AF103101 AF103237 AF103326 DQ926493 DQ097894 DQ097898 EF624133 EF624134 EF624137 EF624139 EU099193 EU146334 EU146384 AF103118 FJ385354 AY393014 EU099058 EU099190 HM995112 AY393019 L12067 L12070 AY393221 AY393225 AY393230 AY393244 AY393245 AY393246 AY393253 AY393261 AY393265 AY393272 AY393339 AY393362 AY393364 AY393494 AY393498 AY393507 AY393512 AY393521 AY393526 AY393527 AY393537 AY393658 AY393663 AY393681 EF177942 EF178122 AY640486 AF022009 AF062293 AF062306 AY685298 AY866751 AY941910 AY941960 DQ100669 DQ100695 DQ100823 DQ101000 DQ523958 GU570214 GU570234 GU570240 GU570244 HM994961 HM995031 HM995113 HM995115 HM995117 HM995118 HM995409 HM995411 HM995412 HM995413 HM995414 HM995415 HM995428 HM995461 HM995728 HM996035 HM996132 HM996228 HM996503 HM996531 HM996549 HQ378367 U64480 AB066989 AB067026 AB363145 AB363159 AY033251 AY033263 AY033264 AY941851 AY941917 DQ065675 DQ065679 DQ065695 DQ926155 DQ926171 DQ926203 DQ926402 DQ926411 DQ926472 DQ926480 DQ926481 DQ926483 DQ926540 DQ926542 DQ926549 EF177954 EF178002 EF178074 EF178082 EU794408 EU794435 FJ195464 FJ195469 FJ195474 FJ385305 FJ385319 FJ385363 FJ385390 FM160411 HQ378352 Z92891 AB063681 AB063682 AB063683 AB063684 AB063688 AB063689 AB063692 AB063693 AB063694 AB063695 AB063696 AB063702 AB063710 AB063718 AB063722 AB063725 AB063737 AB063738 AB063739 AB063746 AB063748 AB063786 AB063788 AB063795 AB063814 AB063816 AB063817 AB063819 AB063820 AB063821 AB063823 AB063825 AB063870 AB063904 AB063923 AB066999 AB067155 AB067156 AB067160 AB067163 AB067165 AB067171 AB067179 AB067302 AB067303 AB067332 AB067397 AF021967 AF021968 AF062199 AF062246 AF115131 AF115132 AF115133 AF115134 AF174092 AF174102 AF174123 AJ239345 AJ293739 AJ293740 AJ413994 AJ414022 AY530314 AY530319 AY971114 DQ065688 DQ100806 DQ926283 DQ926285 DQ926517 GU570230 GU570235 GU570236 GU570237 GU570238 GU570242 HM995881 HQ689758 JN158093 U00500 U00503 U00542 U00589 U64484 U77375 X61647 X91804 Z18832 Z18851 Z46855 DQ535265 DQ535277 DQ535295 DQ535369 DQ535473 EF177949 EF178045 EF178047 EF178059 EF178069 HM995648 HM995649 HM995876 AF026930 AF062147 AF062150 AF062212 AF062265 AF174028 L38435 M28136 X15611 X60504 Z14963 BC073789 BC051319 BC051328 TSC_hg19_v1_chr14_-_106642052 AK301327 AK301389 BC005951 BX640625 BX640626	-72483	-	HM773994 HM773969 HM774039 HM774286 HM774541 L26903 AF471552 AF165112 AF103256 AF103274 AF485481 AY422534 HM995226 AF485479 HM995136 DQ187519 AF471191 AY423174 AY423212 AY487925 AJ239389 FJ195534 AJ239350 EF633792 HM994991 HM994995 HM995120 HM995247 HM995734 HM995857 HM995861 HM995862 HM995956 HM995966 HM996020 HM996043 HM996120 AJ233704 DQ100731 DQ926104 DQ926196 DQ926591 AF021977 AF211206 AF398960 AF408726 AF471175 AF471198 AF471363 AF471489 AJ556667 AJ556739 DQ535353 DQ926403 DQ926454 EF177946 FN563816 GU570347 HQ689731 U64478 Z96957 AF283800 AJ519282 M86598 M86599 TSC_hg19_v1_chr14_-_106714902	445	-	X67943 TSC_hg19_v1_chr14_-_106721546	7195	-	AF267078 U64476 DQ523922 AF460679 AF460691 U64467 DQ454508 DQ523923 AY003727 DQ454426 DQ454615 GQ232878 GQ232903 GQ232925 GQ232927 GQ232947 EU814957 JF810265 AY003761 AF103273 GU552695 DQ454618 FJ874064 GQ232772 GQ232846 GU552694 GU552734 GU552752 AY003728 HM996533 AY003827 AY003856 GQ232877 GU552710 AY003715 AY003717 AY003738 AY003843 AY003847 AY003852 DQ454401 DQ454562 GQ232908 AY003766 GQ232777 GQ232859 GQ232872 GQ232923 GU552704 GU552708 GU552718 GU552741 GU552742 GU552746 GU552748 GU552758 GU552759 DQ454687 DQ454876 DQ523884 DQ454518 FJ840380 FJ840175 FJ840178 FJ840222 FJ873867 Z11945 AY003806 DQ454747 FJ839967 FJ839989 FJ840090 FJ840195 FJ840312 FJ840319 FJ840320 FJ840327 FJ840338 FJ840391 FJ873815 FJ873824 FJ873849 FJ873872 FJ873885 FJ873902 FJ873910 FJ873913 FJ873916 FJ873922 FJ873935 FJ873946 FJ873974 FJ873975 FJ874010 FJ874023 FJ874034 FJ874046 FJ874048 FJ874074 FJ874087 GQ504854 HM116131 HM116209 HM116214 AF103210 AJ008183 AJ008196 AJ008214 AJ008241 DQ454767 AY003815 AY003870 AY003737 AY003774 AY003778 AY003820 DQ454753 EU433871 EU433883 GQ504883 HM996150 AY003857 GQ504910 AF103115 EU099172 EU099195 EU099110 AJ132560 AJ132561 AJ132562 AJ132563 EU099182 EU099264 AJ010334 DQ454751 EU099225 EU099256 HM996312 AY206990 DQ523924 DQ524170 GQ504968 TSC_hg19_v1_chr14_-_106725449 AM183988 AM183989 AM183991 AM279574 GQ232938 HQ703990 AF103328 AF103356 AF103073 AF103150 AF103286 AF103290 AF103371 HM774572 GQ504879 GQ504884 GQ504947 JN111000 AF103035 EU146335 AF103352 AF103353 AF103049 GQ504964 JN110538 JN110631 JN110645 JN110650 JN110677 JN110696 JN110699 JN110787 L03816 L03817 L03818 L03819 L04342 AF103198 AY062298 FJ385357 FJ385358 GQ504851 GQ504868 GQ504870 GQ504875 GQ504878 GQ504881 GQ504888 GQ504889 GQ504890 GQ504895 GQ504903 GQ504923 GQ504924 GQ504933 GQ504937 GQ504946 GQ504950 GQ504972 GQ504974 GQ504976 GQ504978 GQ504983 GQ504985 GQ504987 GQ504988 HM773970 HM773998 HM774045 HM774098 HM774232 HM774297 HM774352 HM774364 HM774372 HM774385 HM774431 HM774434 HM774459 HM774503 HM774582 HM774648 HM774689 HM774750 HM774890 HM774978 HQ703998 HQ703999 HQ704017 HQ704042 L26906 L33031 AF103369 AF103154 AF103366 AF165104 U41571 AF103321 AF103335 AJ008250 AY099259 EU146323 EU146326 EU146327 EU146329 EU146332 EU146342 EU146374 EU146387 X93001 X93003 Y18120 DQ100810 DQ100879 AJ271551 AJ271557 AJ272334 AJ298607 AJ300784 AY423185 DQ100843 L02256 L02262 L02264 L02266 L02268 L02269 AF001424 AF471287 AF485441 AF485447 AJ241351 AY422534 AY423163 AY646422 HM995130 L19917 AF485437 AF485457 AF485473 AJ006648 AJ300780 AY423180 L19903 L19920 U21262 U21272 AF103148 AY062299 HM995230 HM996491 AF062191 DQ100915 HM995048 AY062297 FN563767 X81742 AF098362 AY640484 U00525 X79164 AF062289 AF062297 AF062298 AF062301 AF062304 AF062307 AY866624 AY941927 AY971138 DQ100817 DQ524115 DQ926052 DQ926056 DQ926057 DQ926276 DQ926278 EF633810 EF633827 HM994987 HM994988 HM995202 HM995232 HM995233 HM995238 HM995242 HM995243 HM995256 HM995257 HM995259 HM995260 HM995261 HM995262 HM995263 HM995264 HM995266 HM995390 HM995391 HM995393 HM995422 HM995434 HM995436 HM995437 HM995438 HM995451 HM995466 HM995568 HM995590 HM995620 HM995822 HM995931 HM995959 HM996082 HM996159 HM996219 HM996232 Z98720 Z98721 AJ245230 AJ555259 DQ005303 DQ840756 Z96968 Z98718 AB027439 AB067177 AB087877 AF004323 AF174111 AJ233694 AJ308450 AJ508767 AY686918 AY781826 AY781828 AY866718 AY944694 AY944710 AY944718 DQ005292 DQ065685 DQ100684 DQ100710 DQ100713 DQ100794 DQ100838 DQ100851 DQ100860 DQ100890 DQ100975 DQ431645 DQ926026 DQ926027 DQ926030 DQ926044 DQ926045 DQ926046 DQ926047 DQ926048 DQ926076 DQ926128 DQ926134 DQ926185 DQ926288 DQ926298 DQ926358 DQ926375 DQ926580 DQ926584 EF177967 EF178003 EF178031 EF178096 EF178104 EF178138 EF633826 FJ385282 FJ385309 FJ385317 FJ385389 GU570312 HM995971 HQ129860 HQ378370 L19915 L19916 L19919 L43083 L43085 L48237 U21259 U58144 Y09384 Y09386 Y09388 AB021519 AB021521 AB021523 AB021526 AB021530 AB021533 AB021534 AB021536 AB021541 AB063654 AB063664 AB063672 AB063675 AB063799 AB063807 AB063811 AB063824 AB063849 AB063887 AB063890 AB066894 AB066973 AB066977 AB067077 AB067081 AB067095 AB067102 AB067124 AB067240 AB067250 AB067252 AB067259 AB067260 AB288084 AB585999 AF004322 AF004324 AF015123 AF015125 AF015126 AF015128 AF015129 AF015130 AF015132 AF015133 AF015134 AF015135 AF021986 AF022011 AF052520 AF052522 AF052524 AF062167 AF062251 AF115107 AF115108 AF115109 AF115110 AF123351 AF123354 AF123355 AF123356 AF123357 AF123358 AF123359 AF123360 AF123361 AF123363 AF123364 AF123365 AF123366 AF123367 AF123368 AF123369 AF123370 AF123371 AF123372 AF123373 AF123374 AF123375 AF123376 AF123377 AF123378 AF123379 AF174038 AF174057 AF174067 AF174077 AF174083 AF174089 AF174098 AF174101 AF174103 AF174105 AF231394 AF231395 AF231396 AF231397 AF231398 AF231399 AF231400 AF231402 AF231403 AF302822 AF396474 AF396476 AF442756 AF455924 AF471288 AF471289 AF471294 AF471317 AF471318 AF471321 AF471325 AF471326 AF471330 AF471331 AF471339 AF471349 AF471350 AF471358 AF471359 AF471369 AF471370 AF471371 AF471372 AF471375 AF471376 AF471384 AF471387 AJ006111 AJ006114 AJ006115 AJ006116 AJ006117 AJ006118 AJ006119 AJ006120 AJ239348 AJ239354 AJ239367 AJ239378 AJ243110 AJ245229 AJ249630 AJ271555 AJ276097 AJ298606 AJ298608 AJ298609 AJ298610 AJ298611 AJ300789 AJ300794 AJ313386 AJ414026 AJ519289 AJ519297 AJ555256 AJ555270 AJ579095 AJ579100 AJ579106 AJ579108 AJ579113 AJ579142 AJ579157 AJ579159 AJ579181 AJ579184 AJ579188 AJ579195 AJ579196 AJ579221 AJ579225 AJ579226 AJ579228 AJ579236 AJ579238 AJ579261 AJ579264 AJ579267 AJ579270 AJ579271 AJ579272 AJ579274 AJ579277 AJ579278 AJ579280 AJ579283 AJ617570 AJ627233 AJ627234 AJ627240 AJ627250 AM259136 AM259140 AM279605 AY033252 AY033255 AY055484 AY263417 AY263418 AY345920 AY376120 AY506559 AY554180 AY577295 AY640513 AY640540 AY686868 AY686874 AY781824 AY781873 AY789123 AY789125 AY789442 AY846269 AY866781 AY866785 AY866788 AY880990 AY885173 AY927662 AY941888 AY941899 AY941902 AY941930 AY941947 AY944688 AY944707 AY971091 AY971124 D83687 D83693 DQ065632 DQ065707 DQ100700 DQ100717 DQ100842 DQ212496 DQ212498 DQ212500 DQ328862 DQ379475 DQ535280 DQ535283 DQ535297 DQ535299 DQ535303 DQ535312 DQ535317 DQ535318 DQ535343 DQ535368 DQ535376 DQ535380 DQ535400 DQ535446 DQ535463 DQ535471 DQ535477 DQ535481 DQ926151 DQ926157 DQ926210 DQ926214 DQ926215 DQ926279 DQ926353 DQ926370 DQ926380 DQ926441 DQ926551 DQ926579 EF178054 EF633771 EF633773 EF633774 EF633775 EF633776 EF633777 EF633778 EF633822 EF633828 FJ385277 FJ385291 FJ385311 FJ385361 FJ385380 FJ385384 FJ481090 FJ492915 FJ492944 FN562944 FN562945 FN562946 FN562947 FN562948 FN562949 FN562950 FN562951 FN562952 FN562953 FN562954 FN562955 FN562956 FN562957 FN562958 FN562959 FN562960 FN562961 FN562962 FN562963 FN562964 FN562965 FN562966 FN562967 FN562968 FN563753 FN563754 FN563755 FN563756 FN563757 FN563758 FN563759 FN563760 FN563761 FN563763 FN563764 FN563770 FN563773 FN563774 FN563775 FN563776 FN563777 FN563778 FN563779 FN563782 FN563783 FN563787 FN563788 FN563790 FN563791 FN563792 FN563793 FN563794 FN563796 FN563797 FN563799 FN563801 FN563804 FN563806 FN563808 FN563809 FN563810 FN563815 FN563816 FN563819 FN563820 FN563821 FN563822 FN563823 FN563824 FN563825 FN563826 FN563827 FN563828 GU570309 GU570311 GU570316 GU570317 GU570318 GU570319 GU570322 GU570340 HM152515 HM152523 HQ129862 HQ689770 L12188 L14822 L25292 L34164 M17746 M17747 M17748 M17749 M57940 M57941 M57942 M57943 M57944 M87268 S55094 S67717 U00491 U00495 U00509 U00510 U00521 U00536 U00537 U00541 U00549 U07986 U27187 U38588 U64486 U76685 U77373 U82257 U93176 U95236 U95237 U96286 U97242 X62955 X62956 X62957 X62962 X62963 X62964 X62971 X69692 X98751 X99363 X99365 Z33900 Z33903 Z46382 Z74668 Z96954 Z96955 Z96956 Z96958 Z96967 Z96975 Z98714 Z98715 Z98716 Z98717 Z98719 Z98723 Z98725 AJ519288 AJ519312 S73957 X81746 AJ519239 AJ519328 AJ519258 AJ519219 AJ519235 AJ519237 AJ519238 AJ519240 AJ519244 AJ519248 AJ519252 AJ519257 AJ519259 AJ519263 AJ519264 AJ519265 AJ519269 AJ519272 AJ519273 AJ519276 AJ519277 AJ519283 AJ519285 AJ519286 AJ519290 AJ519291 AJ519296 AJ519300 AJ519301 AJ519302 AJ519303 AJ519307 AJ519314 AJ519316 AJ519317 AJ519318 AJ519319 AJ519320 AJ519321 AJ519322 AJ519326 AJ519327 AJ519329 AJ519331 AJ519333 AJ519334 AJ519336 AJ519338 AJ519339 HM995767 HM995894 HM995896 HM995906	11066	-	AK098108|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK027379|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097359|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128635|IGHD|3495|immunoglobulin heavy constant delta##AK129812|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130453|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640622|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073789|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC051328|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK301327|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301389|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC005951|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640625|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BX640626|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF103353|IGK@|50802|immunoglobulin kappa locus##AB087877|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##AF231396|IGHV3-23|28442|immunoglobulin heavy variable 3-23##AJ006111|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006114|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006115|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006117|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006118|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006119|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006120|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ519334|IGHV3-23|28442|immunoglobulin heavy variable 3-23	0.0	
chr9	16039503	16039640	reg1022871.p1	6.392	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-486550	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-528611	-	AF098483 AF098482 NM_021144	-529324	-	TSC_hg19_v1_chr9_-_16727889 AY438376	688326	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	831096	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	831195	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.0	
chr11	130786393	130786553	reg1021943.p2	6.391	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-85	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-128	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-467811	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	453996	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	994151	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	994866	+	NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin	0.999624	CTCF.p2:-16:1.000
chr1	173224491	173224606	reg1017685.p1	6.391	+	CR542033 D90224 X79929 NM_003326	-48156	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	-49895	-	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	-204492	-	TSC_hg19_v1_chr1_-_173446300 AK127238	221760	-	TSC_hg19_v1_chr1_+_173446473 AK300680	221925	+	TSC_hg19_v1_chr1_+_173446484 BC035857 NM_004905 AK289352 BC025421 D14662 BC053550 CU690218 AJ844621	221979	+	CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK127238|LOC100506023|100506023|uncharacterized LOC100506023##AK300680|PRDX6|9588|peroxiredoxin 6##BC035857|PRDX6|9588|peroxiredoxin 6##NM_004905|PRDX6|9588|peroxiredoxin 6##AK289352|PRDX6|9588|peroxiredoxin 6##BC025421|PRDX6|9588|peroxiredoxin 6##D14662|PRDX6|9588|peroxiredoxin 6##BC053550|PRDX6|9588|peroxiredoxin 6##AJ844621|PRDX6|9588|peroxiredoxin 6	0.936158	CTCF.p2:-13:0.936
chr1	236300846	236301013	reg1020922.p1	6.391	+	TSC_hg19_v1_chr1_-_236228670 BC012501	-72189	-	TSC_hg19_v1_chr1_-_236228496 AK297234	-72431	-	TSC_hg19_v1_chr1_-_236228477 NM_002508	-72451	-	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	4947	+	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	144259	-	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	144387	-	BC012501|NID1|4811|nidogen 1##AK297234|NID1|4811|nidogen 1##NM_002508|NID1|4811|nidogen 1##BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)	0.331886	CTCF.p2:31:0.332
chr17	73521053	73521159	reg1020038.p1	6.391	+	TSC_hg19_v1_chr17_+_73512608 NM_207346 AK094466 BC045551 BC053643 BC047793 CU690512	-8492	+	BC066643 NM_020753 TSC_hg19_v1_chr17_-_73511632	-9467	-	TSC_hg19_v1_chr17_-_73511556 AF451976 BC032359	-9571	-	TSC_hg19_v1_chr17_+_73521798 NM_001015002 NM_001031803 NM_004524 BC010879 BC006503 X87342 BC067840 BC064994 BC080595	690	+	TSC_hg19_v1_chr17_+_73553885 AK126687	32779	+	AF418286 AF418287 AF418288 AF418289 AF418290 AF418291 TSC_hg19_v1_chr17_+_73584199	63069	+	NM_207346|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##AK094466|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC045551|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC053643|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC047793|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC066643|CASKIN2|57513|CASK interacting protein 2##NM_020753|CASKIN2|57513|CASK interacting protein 2##AF451976|CASKIN2|57513|CASK interacting protein 2##BC032359|CASKIN2|57513|CASK interacting protein 2##NM_001015002|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_001031803|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_004524|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC010879|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC006503|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##X87342|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC067840|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC064994|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##AK126687|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##AF418286|MYO15B|80022|myosin XVB pseudogene##AF418287|MYO15B|80022|myosin XVB pseudogene##AF418288|MYO15B|80022|myosin XVB pseudogene##AF418289|MYO15B|80022|myosin XVB pseudogene##AF418290|MYO15B|80022|myosin XVB pseudogene##AF418291|MYO15B|80022|myosin XVB pseudogene	0.020548	
chr19	36311000	36311116	reg1021072.p2	6.391	+	NM_021232 U80018	-6858	-	TSC_hg19_v1_chr19_-_36303772 BC038853	-7287	-	BC039710 TSC_hg19_v1_chr19_-_36303748	-7322	-	NM_004646	31836	-	BC007312 NM_032123 NM_199179 NM_199180 AY358742 AL136654 AB593116	36769	+	TSC_hg19_v1_chr19_+_36359436 NM_001024807 NM_005166 BC013850 AK092376 BC012889 AK312292 BC032983 U48437 AB527091 CU680434 DQ891341 DQ894523	48406	+	NM_021232|PRODH2|58510|proline dehydrogenase (oxidase) 2##U80018|PRODH2|58510|proline dehydrogenase (oxidase) 2##BC038853|PRODH2|58510|proline dehydrogenase (oxidase) 2##BC039710|PRODH2|58510|proline dehydrogenase (oxidase) 2##NM_004646|NPHS1|4868|nephrosis 1, congenital, Finnish type (nephrin)##BC007312|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##NM_032123|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##NM_199179|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##NM_199180|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##AY358742|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##AL136654|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##AB593116|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##NM_001024807|APLP1|333|amyloid beta (A4) precursor-like protein 1##NM_005166|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC013850|APLP1|333|amyloid beta (A4) precursor-like protein 1##AK092376|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC012889|APLP1|333|amyloid beta (A4) precursor-like protein 1##AK312292|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC032983|APLP1|333|amyloid beta (A4) precursor-like protein 1##U48437|APLP1|333|amyloid beta (A4) precursor-like protein 1##DQ891341|APLP1|333|amyloid beta (A4) precursor-like protein 1##DQ894523|APLP1|333|amyloid beta (A4) precursor-like protein 1	0.417565	CTCF.p2:12:0.394
chr22	17555951	17556048	reg1020274.p2	6.391	+	AB076978 NM_001037814	-66888	-	BC137521 BC137522 BC144679 AY989815 AK098608 AY534240 BC045548 NM_175878	-253430	-	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	-482430	-	TSC_hg19_v1_chr22_+_17565850 NM_014339	9852	+	TSC_hg19_v1_chr22_+_17565906 BC011624	9903	+	TSC_hg19_v1_chr22_+_17565921 CT841520 BC012071 U58917 AB527163 CU013105 CU013393 DQ891962 DQ895152 JF305973	9951	+	AB076978|GAB4|128954|GRB2-associated binding protein family, member 4##NM_001037814|GAB4|128954|GRB2-associated binding protein family, member 4##BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014339|IL17RA|23765|interleukin 17 receptor A##BC011624|IL17RA|23765|interleukin 17 receptor A##CT841520|IL17RA|23765|interleukin 17 receptor A##BC012071|IL17RA|23765|interleukin 17 receptor A##U58917|IL17RA|23765|interleukin 17 receptor A##DQ891962|IL17RA|23765|interleukin 17 receptor A##DQ895152|IL17RA|23765|interleukin 17 receptor A##JF305973|IL17RA|23765|interleukin 17 receptor A	0.95395	CTCF.p2:-3:0.954
chr2	85173456	85173620	reg1022771.p1	6.391	+	TSC_hg19_v1_chr2_+_85133055 M92381	-40476	+	NM_021103 AK130949 D28363 TSC_hg19_v1_chr2_+_85132779 AK311952 BC016731 BC107889 S54005 BC016025 M20259 AY453400	-40743	+	TSC_hg19_v1_chr2_-_85108241 NM_001080824 BC051789	-65235	-	TSC_hg19_v1_chr2_+_85198299 NM_020122	24746	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	24953	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	187121	+	M92381|TMSB10|9168|thymosin beta 10##NM_021103|TMSB10|9168|thymosin beta 10##AK130949|TMSB10|9168|thymosin beta 10##AK311952|TMSB10|9168|thymosin beta 10##BC016731|TMSB10|9168|thymosin beta 10##BC107889|TMSB10|9168|thymosin beta 10##S54005|TMSB10|9168|thymosin beta 10##BC016025|TMSB10|9168|thymosin beta 10##M20259|TMSB10|9168|thymosin beta 10##AY453400|TMSB10|9168|thymosin beta 10##NM_001080824|C2orf89|129293|chromosome 2 open reading frame 89##BC051789|C2orf89|129293|chromosome 2 open reading frame 89##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	0.984418	CTCF.p2:-8:0.984
chr7	42016836	42016945	reg1021057.p1	6.390	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-274205	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1842281	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1842359	+	NM_000168	259727	-	TSC_hg19_v1_chr7_-_42276797 AK308429	259905	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	934699	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.995771	CTCF.p2:2:0.996
chr12	108384217	108384332	reg1020363.p1	6.389	+	AY238895 NM_203436	-216113	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-229273	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	-229364	-	BC110330 AB018332 NM_014653	139213	+	NM_001142345	330164	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	348810	-	AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1	0.994547	CTCF.p2:4:0.995
chr6	120287774	120287908	reg1021785.p2	6.389	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-616920	-	BX538186 AK091682 AX747126 NM_001100411	-817495	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-887933	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	1367802	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	1468984	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	2432854	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.014811	
chr19	57791259	57791412	reg1022556.p1	6.388	+	TSC_hg19_v1_chr19_+_57752051 NM_001023563 NM_001145078	-39278	+	AK297977 TSC_hg19_v1_chr19_+_57751999	-39347	+	AY661554 NM_001015879 NM_003160 AK301886 NM_001015878 AF054621	-48932	+	TSC_hg19_v1_chr19_+_57791351 AK298106	21	+	TSC_hg19_v1_chr19_+_57791852 AK292144 NM_006635 AK074582 AY329492	552	+	TSC_hg19_v1_chr19_+_57831849 NM_213598 AK131547	40579	+	NM_001023563|ZNF805|390980|zinc finger protein 805##NM_001145078|ZNF805|390980|zinc finger protein 805##AK297977|ZNF805|390980|zinc finger protein 805##AY661554|AURKC|6795|aurora kinase C##NM_001015879|AURKC|6795|aurora kinase C##NM_003160|AURKC|6795|aurora kinase C##NM_001015878|AURKC|6795|aurora kinase C##AF054621|AURKC|6795|aurora kinase C##AK298106|ZNF460|10794|zinc finger protein 460##AK292144|ZNF460|10794|zinc finger protein 460##NM_006635|ZNF460|10794|zinc finger protein 460##AK074582|ZNF460|10794|zinc finger protein 460##AY329492|ZNF460|10794|zinc finger protein 460##NM_213598|ZNF543|125919|zinc finger protein 543##AK131547|ZNF543|125919|zinc finger protein 543	0.677531	CTCF.p2:3:0.678
chr6	37621788	37621939	reg1024435.p1	6.388	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-154167	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-154211	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-218426	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	43843	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	165427	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	165827	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.999255	CTCF.p2:13:0.999
chr6_dbb_hap3	4594430	4594558	reg1026559.p1	6.388	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.028597	
chr9	127048245	127048425	reg1022352.p1	6.388	+	TSC_hg19_v1_chr9_+_127020588 AL832574	-27745	+	TSC_hg19_v1_chr9_+_127020519 NM_001166168 AK313071	-27812	+	TSC_hg19_v1_chr9_+_127020255 AB026289	-28071	+	TSC_hg19_v1_chr9_+_127054267 NM_001166170 NM_001166171	5924	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	6297	+	TSC_hg19_v1_chr9_+_127119114 BC042968	70834	+	NM_001166168|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AK313071|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166170|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166171|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr18	58352219	58352316	reg1021853.p1	6.387	+	AK314130 NM_005912	-312267	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-785038	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-987617	-	AF217289 BC101047 BC101048 BC101049 NM_031891	805507	+	AK096495 NM_173557	1208036	-	AF109219 TSC_hg19_v1_chr18_-_59854208	1501927	-	AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.965677	CTCF.p2:-9:0.966
chr19	12827840	12827941	reg1019749.p1	6.387	+	AY736034 TSC_hg19_v1_chr19_-_12807434 BC004290 AK302744 AK123037 NM_032301	-20466	-	TSC_hg19_v1_chr19_-_12792699 AK300498 NM_001930 NM_013406	-35177	-	TSC_hg19_v1_chr19_-_12792697 AK291553 AK304780	-35204	-	TSC_hg19_v1_chr19_-_12833356 BC063679 BC072420 NM_013433 BC018314 AK299485	5258	-	NM_001136196 TSC_hg19_v1_chr19_-_12833473	5593	-	TSC_hg19_v1_chr19_-_12834747 AF007748 AK056183 NM_001136195	6844	-	AY736034|FBXW9|84261|F-box and WD repeat domain containing 9##BC004290|FBXW9|84261|F-box and WD repeat domain containing 9##AK302744|FBXW9|84261|F-box and WD repeat domain containing 9##AK123037|FBXW9|84261|F-box and WD repeat domain containing 9##NM_032301|FBXW9|84261|F-box and WD repeat domain containing 9##AK300498|DHPS|1725|deoxyhypusine synthase##NM_001930|DHPS|1725|deoxyhypusine synthase##NM_013406|DHPS|1725|deoxyhypusine synthase##AK291553|DHPS|1725|deoxyhypusine synthase##AK304780|DHPS|1725|deoxyhypusine synthase##BC063679|TNPO2|30000|transportin 2##BC072420|TNPO2|30000|transportin 2##NM_013433|TNPO2|30000|transportin 2##BC018314|TNPO2|30000|transportin 2##AK299485|TNPO2|30000|transportin 2##NM_001136196|TNPO2|30000|transportin 2##AF007748|TNPO2|30000|transportin 2##AK056183|TNPO2|30000|transportin 2##NM_001136195|TNPO2|30000|transportin 2	0.454257	CTCF.p2:0:0.454
chr9	123382159	123382268	reg1022451.p2	6.387	+	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	-39860	-	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	-1250555	-	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-2915526	+	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	94504	-	AF176698 TSC_hg19_v1_chr9_-_123555558	173332	-	TSC_hg19_v1_chr9_-_123555628 BC110334 AF145024 AF193594	173408	-	BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9##AF176698|FBXW2|26190|F-box and WD repeat domain containing 2##BC110334|FBXW2|26190|F-box and WD repeat domain containing 2##AF145024|FBXW2|26190|F-box and WD repeat domain containing 2##AF193594|FBXW2|26190|F-box and WD repeat domain containing 2	0.99955	CTCF.p2:-2:1.000
chr10	2881422	2881533	reg1020460.p1	6.386	+	AF034837 NM_018702	-1101808	-	TSC_hg19_v1_chr10_+_1102822 AK292591	-1778651	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-1778708	+	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	228270	+	AK092597 AX747622 NM_001242339	229341	+	BC021698 TSC_hg19_v1_chr10_+_3151628	270135	+	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet##BC021698|PFKP|5214|phosphofructokinase, platelet	0.999541	CTCF.p2:0:1.000
chr1	168115157	168115259	reg1023288.p2	6.386	+	AK298850 TSC_hg19_v1_chr1_-_168106822 AK122656	-8390	-	AK310019 TSC_hg19_v1_chr1_-_168106793	-8446	-	AK299634 TSC_hg19_v1_chr1_-_168106613	-8634	-	AK313520 TSC_hg19_v1_chr1_+_168148199 AL049670 NM_001031800 NM_152902 AB097034	32933	+	TSC_hg19_v1_chr1_+_168148230 BC009506	33045	+	AK091404 AX746960 AL035297 TSC_hg19_v1_chr1_+_168195245	80036	+	AK298850|GPR161|23432|G protein-coupled receptor 161##AK122656|GPR161|23432|G protein-coupled receptor 161##AK310019|GPR161|23432|G protein-coupled receptor 161##AK299634|GPR161|23432|G protein-coupled receptor 161##AK313520|TIPRL|261726|TIP41, TOR signaling pathway regulator-like (S. cerevisiae)##AL049670|TIPRL|261726|TIP41, TOR signaling pathway regulator-like (S. cerevisiae)##NM_001031800|TIPRL|261726|TIP41, TOR signaling pathway regulator-like (S. cerevisiae)##NM_152902|TIPRL|261726|TIP41, TOR signaling pathway regulator-like (S. cerevisiae)##AB097034|TIPRL|261726|TIP41, TOR signaling pathway regulator-like (S. cerevisiae)##BC009506|TIPRL|261726|TIP41, TOR signaling pathway regulator-like (S. cerevisiae)##AL035297|SFT2D2|375035|SFT2 domain containing 2	0.0	
chr16	20811001	20811120	reg1022617.p1	6.386	+	NM_005622 NM_202000 TSC_hg19_v1_chr16_+_20775331 AK223139 AK290322 X80062	-35716	+	BC000448 TSC_hg19_v1_chr16_-_20753141 AK000281 NM_017736	-57903	-	AB059429 BC125177 BC125178 NM_052956	-108483	-	AB590202 CU679731 DQ895001 DQ895002 TSC_hg19_v1_chr16_-_20817767	6699	-	AK292594 TSC_hg19_v1_chr16_-_20817795 AK304347 BC010503 NM_001142725 NM_080663 AK127391	6725	-	NM_001144924 NM_001199053 NM_030941 TSC_hg19_v1_chr16_+_20817848 BC007646 AF332193 AL136763	6756	+	NM_005622|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##NM_202000|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##AK223139|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##AK290322|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##X80062|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##BC000448|THUMPD1|55623|THUMP domain containing 1##AK000281|THUMPD1|55623|THUMP domain containing 1##NM_017736|THUMPD1|55623|THUMP domain containing 1##AB059429|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##BC125177|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##BC125178|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##NM_052956|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##DQ895001|ERI2|112479|ERI1 exoribonuclease family member 2##DQ895002|ERI2|112479|ERI1 exoribonuclease family member 2##AK292594|ERI2|112479|ERI1 exoribonuclease family member 2##AK304347|ERI2|112479|ERI1 exoribonuclease family member 2##BC010503|ERI2|112479|ERI1 exoribonuclease family member 2##NM_001142725|ERI2|112479|ERI1 exoribonuclease family member 2##NM_080663|ERI2|112479|ERI1 exoribonuclease family member 2##AK127391|ERI2|112479|ERI1 exoribonuclease family member 2##NM_001144924|LOC81691|81691|exonuclease NEF-sp##NM_001199053|LOC81691|81691|exonuclease NEF-sp##NM_030941|LOC81691|81691|exonuclease NEF-sp##BC007646|LOC81691|81691|exonuclease NEF-sp##AF332193|LOC81691|81691|exonuclease NEF-sp##AL136763|LOC81691|81691|exonuclease NEF-sp	0.997593	CTCF.p2:22:0.998
chr16	2482328	2482433	reg1024870.p1	6.386	+	TSC_hg19_v1_chr16_+_2479464 Z36714 AK313371 U17105 BC012349 AB208829 DQ890775	-2931	+	TSC_hg19_v1_chr16_+_2479392 NM_001761	-2989	+	TSC_hg19_v1_chr16_-_2390785 AB210044 NM_001089	-91614	-	AK128408 TSC_hg19_v1_chr16_+_2510099 NM_025108 AK093788 AK301929 AX748307 BC018719 AK023971	27732	+	NM_006181 U86759	39119	+	TSC_hg19_v1_chr16_+_2525149 BC112389 NM_001199107 NM_020705 AB032997	42751	+	Z36714|CCNF|899|cyclin F##AK313371|CCNF|899|cyclin F##U17105|CCNF|899|cyclin F##BC012349|CCNF|899|cyclin F##AB208829|CCNF|899|cyclin F##DQ890775|CCNF|899|cyclin F##NM_001761|CCNF|899|cyclin F##AB210044|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##NM_001089|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##AK128408|C16orf59|80178|chromosome 16 open reading frame 59##NM_025108|C16orf59|80178|chromosome 16 open reading frame 59##AK093788|C16orf59|80178|chromosome 16 open reading frame 59##AK301929|C16orf59|80178|chromosome 16 open reading frame 59##BC018719|C16orf59|80178|chromosome 16 open reading frame 59##AK023971|C16orf59|80178|chromosome 16 open reading frame 59##NM_006181|NTN3|4917|netrin 3##U86759|NTN3|4917|netrin 3##BC112389|TBC1D24|57465|TBC1 domain family, member 24##NM_001199107|TBC1D24|57465|TBC1 domain family, member 24##NM_020705|TBC1D24|57465|TBC1 domain family, member 24##AB032997|TBC1D24|57465|TBC1 domain family, member 24	0.187213	
chr16	68624513	68624643	reg1023341.p1	6.386	+	NM_133458	-50918	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	-51380	+	TSC_hg19_v1_chr16_+_68564035 BC040871	-60545	+	NM_001793	53572	+	TSC_hg19_v1_chr16_+_68679201 AK296968 AK312554 AK225396	54627	+	X63629 TSC_hg19_v1_chr16_+_68679239 AB527800 EU832319 EU832404	54676	+	NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##NM_001793|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK296968|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK312554|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK225396|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##X63629|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##EU832319|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##EU832404|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)	0.996727	CTCF.p2:-6:0.997
chr21	28089601	28089745	reg1022534.p2	6.386	+	AY061853 AF401639 AK223576 AK313231 BC036761 AL833200 NM_052954 AK054581 AK304124	-144239	-	AK296229 NM_001136131	-546228	-	TSC_hg19_v1_chr21_-_27543138 NM_000484 NM_001136129 NM_001136130 NM_001204301 NM_001204302 NM_001204303 NM_201413 NM_201414	-546537	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	127798	-	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	128039	-	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	249766	-	AY061853|CYYR1|116159|cysteine/tyrosine-rich 1##AF401639|CYYR1|116159|cysteine/tyrosine-rich 1##AK223576|CYYR1|116159|cysteine/tyrosine-rich 1##AK313231|CYYR1|116159|cysteine/tyrosine-rich 1##BC036761|CYYR1|116159|cysteine/tyrosine-rich 1##AL833200|CYYR1|116159|cysteine/tyrosine-rich 1##NM_052954|CYYR1|116159|cysteine/tyrosine-rich 1##AK054581|CYYR1|116159|cysteine/tyrosine-rich 1##AK304124|CYYR1|116159|cysteine/tyrosine-rich 1##AK296229|APP|351|amyloid beta (A4) precursor protein##NM_001136131|APP|351|amyloid beta (A4) precursor protein##NM_000484|APP|351|amyloid beta (A4) precursor protein##NM_001136129|APP|351|amyloid beta (A4) precursor protein##NM_001136130|APP|351|amyloid beta (A4) precursor protein##NM_001204301|APP|351|amyloid beta (A4) precursor protein##NM_001204302|APP|351|amyloid beta (A4) precursor protein##NM_001204303|APP|351|amyloid beta (A4) precursor protein##NM_201413|APP|351|amyloid beta (A4) precursor protein##NM_201414|APP|351|amyloid beta (A4) precursor protein##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5	0.295419	CTCF.p2:1:0.295
chr3	148445150	148445299	reg1022628.p2	6.386	+	NM_000685 NM_004835 NM_009585 NM_031850 TSC_hg19_v1_chr3_+_148415688 AK291541 BC068494 BC022447 M87290 S77410 X65699	-29537	+	BC104848 BC104850 TSC_hg19_v1_chr3_+_147127864 AB464362	-1317362	+	TSC_hg19_v1_chr3_+_147127156 NM_003412	-1318053	+	NM_032049	2742	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	100374	+	NM_001870 AK313628 BC012613 DQ892805 DQ896052 CU680374 M27717	137844	+	NM_000685|AGTR1|185|angiotensin II receptor, type 1##NM_004835|AGTR1|185|angiotensin II receptor, type 1##NM_009585|AGTR1|185|angiotensin II receptor, type 1##NM_031850|AGTR1|185|angiotensin II receptor, type 1##AK291541|AGTR1|185|angiotensin II receptor, type 1##BC068494|AGTR1|185|angiotensin II receptor, type 1##BC022447|AGTR1|185|angiotensin II receptor, type 1##M87290|AGTR1|185|angiotensin II receptor, type 1##S77410|AGTR1|185|angiotensin II receptor, type 1##X65699|AGTR1|185|angiotensin II receptor, type 1##BC104848|ZIC1|7545|Zic family member 1##BC104850|ZIC1|7545|Zic family member 1##NM_003412|ZIC1|7545|Zic family member 1##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)##NM_001870|CPA3|1359|carboxypeptidase A3 (mast cell)##AK313628|CPA3|1359|carboxypeptidase A3 (mast cell)##BC012613|CPA3|1359|carboxypeptidase A3 (mast cell)##DQ892805|CPA3|1359|carboxypeptidase A3 (mast cell)##DQ896052|CPA3|1359|carboxypeptidase A3 (mast cell)##M27717|CPA3|1359|carboxypeptidase A3 (mast cell)	0.969528	CTCF.p2:15:0.970
chr7	98470102	98470199	reg1021230.p1	6.386	+	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	-2474	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	-2523	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	-2620	-	TSC_hg19_v1_chr7_+_98476154 AF076974 NM_001244580 NM_003496 AF110377	6000	+	AF199364 AB385491 AF464850 TSC_hg19_v1_chr7_-_98741471	271273	-	TSC_hg19_v1_chr7_-_98741637 BC136804 BC144414	271480	-	NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AF076974|TRRAP|8295|transformation/transcription domain-associated protein##NM_001244580|TRRAP|8295|transformation/transcription domain-associated protein##NM_003496|TRRAP|8295|transformation/transcription domain-associated protein##AF110377|TRRAP|8295|transformation/transcription domain-associated protein##AF199364|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##AF464850|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##BC136804|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1##BC144414|SMURF1|57154|SMAD specific E3 ubiquitin protein ligase 1	0.936023	CTCF.p2:-13:0.936
chr9	128190395	128190512	reg1020987.p1	6.386	+	TSC_hg19_v1_chr9_+_128024122 AK056493 NM_015635 AB040954 BC114937 BC114962	-166304	+	TSC_hg19_v1_chr9_+_128024104 BC110990	-166349	+	TSC_hg19_v1_chr9_+_128024097 AK296381	-166355	+	TSC_hg19_v1_chr9_-_128469297 M37191	278857	-	TSC_hg19_v1_chr9_-_128469466 AK290060	279014	-	AL833042 TSC_hg19_v1_chr9_-_128469485 AY633624 AY633625 AY633626 BC002326 BC003044	279026	-	AK056493|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##NM_015635|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AB040954|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114937|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114962|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC110990|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AK296381|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##M37191|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AK290060|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AL833042|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633624|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633625|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633626|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC002326|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC003044|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1	0.932909	CTCF.p2:3:0.933
chr12	71127305	71127410	reg1022947.p1	6.385	+	AB587339 TSC_hg19_v1_chr12_-_71031179 AK128562 BC051329 BX647238 CR749546 BX648245 AK126121 NM_001109754	-96161	-	BC101679 BC113463 BC143356 BC143360 NM_001206971 NM_001206972 NM_002837 X54131	-123735	-	TSC_hg19_v1_chr12_+_70861858 BC031864	-265489	+	BC119777 BC122866 BC110900 TSC_hg19_v1_chr12_-_71148231	20792	-	X82635 TSC_hg19_v1_chr12_-_71148363 U77917 BC072386	20993	-	TSC_hg19_v1_chr12_-_71148389 BC092469 NM_130846 U77916 BX571751 AK304457 AK304672 NM_001207016	21103	-	AK128562|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC051329|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX647238|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##CR749546|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX648245|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##AK126121|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001109754|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206971|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206972|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC119777|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC122866|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC110900|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##NM_001207016|PTPRR|5801|protein tyrosine phosphatase, receptor type, R	0.993306	CTCF.p2:-6:0.993
chr17	9672070	9672189	reg1024595.p1	6.385	+	BC136368 BC144041 BC171759 AJ583817 NM_153210	-123228	+	NM_001080556 NM_145054 AK074435 AB065281 BC025392 AK094847 AK315679 CU692990	-192152	+	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	-192923	-	BC147024 BC147025 BC171909 NM_001105571 NM_001220493	22484	-	AF105367 BC096261 BC096262 BC096264 NM_004246 BC096263	57253	+	TSC_hg19_v1_chr17_+_9745847 BC041176 BC019818	73730	+	BC136368|USP43|124739|ubiquitin specific peptidase 43##BC144041|USP43|124739|ubiquitin specific peptidase 43##BC171759|USP43|124739|ubiquitin specific peptidase 43##AJ583817|USP43|124739|ubiquitin specific peptidase 43##NM_153210|USP43|124739|ubiquitin specific peptidase 43##NM_001080556|WDR16|146845|WD repeat domain 16##NM_145054|WDR16|146845|WD repeat domain 16##AK074435|WDR16|146845|WD repeat domain 16##AB065281|WDR16|146845|WD repeat domain 16##BC025392|WDR16|146845|WD repeat domain 16##AK094847|WDR16|146845|WD repeat domain 16##AK315679|WDR16|146845|WD repeat domain 16##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8##BC147024|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##BC147025|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##BC171909|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##NM_001105571|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##NM_001220493|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##AF105367|GLP2R|9340|glucagon-like peptide 2 receptor##BC096261|GLP2R|9340|glucagon-like peptide 2 receptor##BC096262|GLP2R|9340|glucagon-like peptide 2 receptor##BC096264|GLP2R|9340|glucagon-like peptide 2 receptor##NM_004246|GLP2R|9340|glucagon-like peptide 2 receptor##BC096263|GLP2R|9340|glucagon-like peptide 2 receptor##BC041176|GLP2R|9340|glucagon-like peptide 2 receptor##BC019818|GLP2R|9340|glucagon-like peptide 2 receptor	0.712285	CTCF.p2:9:0.712
chr6	100624676	100624787	reg1022149.p2	6.385	+	AK123634 NM_001040179 NM_032503 AF347063	-182621	-	AY004253 NM_021620	-570082	+	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	-608128	-	NM_005068 U70212	286819	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	704369	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	704485	-	AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.948429	CTCF.p2:14:0.948
chrX	74145106	74145197	reg1023981.p2	6.385	+	NM_016120 NM_183353 TSC_hg19_v1_chrX_-_73834460	-310687	-	TSC_hg19_v1_chrX_-_73834444 AK001334	-310712	-	BC002451 TSC_hg19_v1_chrX_-_73834428	-310723	-	AK307471 NM_001008537 AB095942 BC152557	148	-	TSC_hg19_v1_chrX_-_74376076 AF078777 AK307414 AF133659 BT009918 CU675349 DQ890692 EU176476 BC006323 AF038950 BX537833 AK294657 AK001418 NM_004299	230952	-	NM_145052 TSC_hg19_v1_chrX_+_74493908 AY643714 AK309951 AK056354 BC015116 CR749336 AK293024	348807	+	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting##NM_183353|RLIM|51132|ring finger protein, LIM domain interacting##AK001334|RLIM|51132|ring finger protein, LIM domain interacting##AK307471|KIAA2022|340533|KIAA2022##NM_001008537|KIAA2022|340533|KIAA2022##AB095942|KIAA2022|340533|KIAA2022##BC152557|KIAA2022|340533|KIAA2022##AF078777|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK307414|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AF133659|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BT009918|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##DQ890692|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##EU176476|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BC006323|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AF038950|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BX537833|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK294657|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK001418|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##NM_004299|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##NM_145052|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AY643714|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK309951|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK056354|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##BC015116|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##CR749336|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK293024|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)	0.013808	
chr10	124326769	124326835	reg1026315.p1	6.384	+	AF159456 AJ000342 AJ243212 AJ243224 NM_004406 NM_007329 NM_017579 BC153299 AJ297935 AK304149 TSC_hg19_v1_chr10_+_124320269 AK304128	-6576	+	TSC_hg19_v1_chr10_+_124221068 AK091944 AX747270 NM_002775 AK092476 AK290089 BC011352 D87258 BC031082 Y07921 AB590567	-105726	+	BC066349 NM_001099667 BC090924	-112623	+	BC140922 BC065903 NM_001010912	132531	-	AY260047 AY260048 AY260049 AY260050 NM_022034	278888	-	BC031343 AK300849 NM_001204364 NM_152644	312314	-	AF159456|DMBT1|1755|deleted in malignant brain tumors 1##AJ000342|DMBT1|1755|deleted in malignant brain tumors 1##AJ243212|DMBT1|1755|deleted in malignant brain tumors 1##AJ243224|DMBT1|1755|deleted in malignant brain tumors 1##NM_004406|DMBT1|1755|deleted in malignant brain tumors 1##NM_007329|DMBT1|1755|deleted in malignant brain tumors 1##NM_017579|DMBT1|1755|deleted in malignant brain tumors 1##BC153299|DMBT1|1755|deleted in malignant brain tumors 1##AJ297935|DMBT1|1755|deleted in malignant brain tumors 1##AK304149|DMBT1|1755|deleted in malignant brain tumors 1##AK304128|DMBT1|1755|deleted in malignant brain tumors 1##AK091944|HTRA1|5654|HtrA serine peptidase 1##NM_002775|HTRA1|5654|HtrA serine peptidase 1##AK092476|HTRA1|5654|HtrA serine peptidase 1##AK290089|HTRA1|5654|HtrA serine peptidase 1##BC011352|HTRA1|5654|HtrA serine peptidase 1##D87258|HTRA1|5654|HtrA serine peptidase 1##BC031082|HTRA1|5654|HtrA serine peptidase 1##Y07921|HTRA1|5654|HtrA serine peptidase 1##BC066349|ARMS2|387715|age-related maculopathy susceptibility 2##NM_001099667|ARMS2|387715|age-related maculopathy susceptibility 2##BC090924|ARMS2|387715|age-related maculopathy susceptibility 2##BC140922|C10orf120|399814|chromosome 10 open reading frame 120##BC065903|C10orf120|399814|chromosome 10 open reading frame 120##NM_001010912|C10orf120|399814|chromosome 10 open reading frame 120##AY260047|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260048|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260049|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260050|CUZD1|50624|CUB and zona pellucida-like domains 1##NM_022034|CUZD1|50624|CUB and zona pellucida-like domains 1##BC031343|FAM24B|196792|family with sequence similarity 24, member B##AK300849|FAM24B-CUZD1|100533195|FAM24B-CUZD1 readthrough##NM_001204364|FAM24B|196792|family with sequence similarity 24, member B##NM_152644|FAM24B|196792|family with sequence similarity 24, member B	0.822129	CTCF.p2:-24:0.822
chr1	230404759	230404877	reg1022473.p1	6.384	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-201822	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-201876	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-642804	+	BC150638 NM_024554	108572	-	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	373378	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	373415	+	AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2	0.0	
chr3	120226147	120226282	reg1025310.p1	6.384	+	TSC_hg19_v1_chr3_-_120169846 AB527652 D89937 BC000055 U06863 AK300356 AK289388 AK291138 AK311050 AK300436 BX647421 AK312261 NM_007085	-56377	-	TSC_hg19_v1_chr3_-_120068162 AB528173 AM393236 BC013757 NM_001099678	-158073	-	NM_001168271 NM_153002	-263073	-	NM_001168331 NM_004547 BC000855 BC146885 BC146887 BC146927 BC146932 TSC_hg19_v1_chr3_+_120315168	88933	+	TSC_hg19_v1_chr3_+_120315182 BC070285 AF044957 DQ891096 DQ894273 DQ894278 BC034579	88978	+	CU687162 EU831603 EU831690 TSC_hg19_v1_chr3_-_120401087 BC071757 Z75048 U63008 AK290782 BC020792 AF045167	174829	-	BC000055|FSTL1|11167|follistatin-like 1##U06863|FSTL1|11167|follistatin-like 1##AK300356|FSTL1|11167|follistatin-like 1##AK289388|FSTL1|11167|follistatin-like 1##AK291138|FSTL1|11167|follistatin-like 1##AK311050|FSTL1|11167|follistatin-like 1##AK300436|FSTL1|11167|follistatin-like 1##BX647421|FSTL1|11167|follistatin-like 1##AK312261|FSTL1|11167|follistatin-like 1##NM_007085|FSTL1|11167|follistatin-like 1##AM393236|LRRC58|116064|leucine rich repeat containing 58##BC013757|LRRC58|116064|leucine rich repeat containing 58##NM_001099678|LRRC58|116064|leucine rich repeat containing 58##NM_001168271|GPR156|165829|G protein-coupled receptor 156##NM_153002|GPR156|165829|G protein-coupled receptor 156##NM_001168331|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##NM_004547|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC000855|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146885|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146887|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146927|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146932|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC070285|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##AF044957|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ891096|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ894273|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ894278|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC034579|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##EU831603|HGD|3081|homogentisate 1,2-dioxygenase##EU831690|HGD|3081|homogentisate 1,2-dioxygenase##BC071757|HGD|3081|homogentisate 1,2-dioxygenase##Z75048|HGD|3081|homogentisate 1,2-dioxygenase##U63008|HGD|3081|homogentisate 1,2-dioxygenase##AK290782|HGD|3081|homogentisate 1,2-dioxygenase##BC020792|HGD|3081|homogentisate 1,2-dioxygenase##AF045167|HGD|3081|homogentisate 1,2-dioxygenase	0.483569	CTCF.p2:9:0.484
chr3	47292188	47292347	reg1022018.p1	6.384	+	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	-86828	-	TSC_hg19_v1_chr3_-_47098906 AK026837	-193324	-	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	-262797	+	BC015311 NM_001134878 NM_022342 NM_182902	32028	-	NM_025010 TSC_hg19_v1_chr3_+_47324433 AK023765 AK291477 AK295292 BX537953 BC015962 AB527175 AM393269 AM393767 BC032620	32161	+	AB040904 NM_015466 TSC_hg19_v1_chr3_+_47422510 AK055157 AK299906 AK295888 AK289502 AB025194 AF290614 AK295877 BC089042	130265	+	AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2##AK026837|SETD2|29072|SET domain containing 2##AK092871|NBEAL2|23218|neurobeachin-like 2##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9##NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)##AK023765|KLHL18|23276|kelch-like 18 (Drosophila)##AK291477|KLHL18|23276|kelch-like 18 (Drosophila)##AK295292|KLHL18|23276|kelch-like 18 (Drosophila)##BX537953|KLHL18|23276|kelch-like 18 (Drosophila)##BC015962|KLHL18|23276|kelch-like 18 (Drosophila)##AM393269|KLHL18|23276|kelch-like 18 (Drosophila)##AM393767|KLHL18|23276|kelch-like 18 (Drosophila)##BC032620|KLHL18|23276|kelch-like 18 (Drosophila)##AB040904|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_015466|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK055157|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK299906|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295888|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK289502|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AB025194|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AF290614|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295877|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##BC089042|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23	0.570125	CTCF.p2:5:0.570
chr3	55521692	55521810	reg1022868.p1	6.384	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-133	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-419	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-6343	-	BC111550 BC112391 AB002376 NM_015576	980626	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	1069451	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	1069495	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.015371	
chr4	9160256	9160372	reg1023314.p1	6.384	+	NM_001040071	-208838	+	AB593128 M99587 NM_018942	-286817	-	U83411 TSC_hg19_v1_chr4_+_8594521	-565791	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	56815	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	85289	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	99534	+	NM_001040071|LOC650293|650293|seven transmembrane helix receptor##M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.989712	CTCF.p2:-9:0.990
chr9	15143032	15143163	reg1022770.p1	6.384	+	BX537574 NM_144966	-232105	-	AB160987 TSC_hg19_v1_chr9_-_14869016	-274098	-	BC031064 NM_001177704	-363567	-	AK301427 NM_001168342	107058	-	TSC_hg19_v1_chr9_-_15307215 BC070139 AK301185 AK298581 AK091187 AX746836	164103	-	TSC_hg19_v1_chr9_-_15307325 AK298998 BC142985 AK310482 NM_001168339 NM_001168340 NM_001168341 NM_152574	164247	-	BX537574|FREM1|158326|FRAS1 related extracellular matrix 1##NM_144966|FREM1|158326|FRAS1 related extracellular matrix 1##AB160987|FREM1|158326|FRAS1 related extracellular matrix 1##BC031064|FREM1|158326|FRAS1 related extracellular matrix 1##NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1##AK301427|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168342|TTC39B|158219|tetratricopeptide repeat domain 39B##BC070139|TTC39B|158219|tetratricopeptide repeat domain 39B##AK301185|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298581|TTC39B|158219|tetratricopeptide repeat domain 39B##AK091187|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298998|TTC39B|158219|tetratricopeptide repeat domain 39B##BC142985|TTC39B|158219|tetratricopeptide repeat domain 39B##AK310482|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168339|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168340|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168341|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_152574|TTC39B|158219|tetratricopeptide repeat domain 39B	0.973023	CTCF.p2:13:0.973
chr1	240352809	240352905	reg1017955.p1	6.383	+	TSC_hg19_v1_chr1_+_240255182 NM_020066	-97680	+	AF279779 NM_000740	-560485	+	TSC_hg19_v1_chr1_+_239550016 AK056349	-802915	+	BC046632 TSC_hg19_v1_chr1_-_240775431	422552	-	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	422597	-	AF090116 AK314862 TSC_hg19_v1_chr1_-_241520451	1167561	-	NM_020066|FMN2|56776|formin 2##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##BC046632|GREM2|64388|gremlin 2##AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2##AF090116|RGS7|6000|regulator of G-protein signaling 7##AK314862|RGS7|6000|regulator of G-protein signaling 7	0.725119	CTCF.p2:4:0.725
chr19	17886294	17886394	reg1019904.p1	6.383	+	NM_001161359 NM_015122 TSC_hg19_v1_chr19_+_17862326 AK316458 BC041130	-24028	+	TSC_hg19_v1_chr19_+_17858564 NM_001161357 NM_001161358 AK291410 BC028021	-27793	+	DQ387861 NM_018174 AL834233 BC067115 TSC_hg19_v1_chr19_+_17830310 BC080547 AJ440784 AK027623 BC113952 AK308975	-56035	+	TSC_hg19_v1_chr19_+_17905918 NM_014256	19572	+	TSC_hg19_v1_chr19_+_17905971 AK075466 AK314323 AK075434 AB015630 AK225421 AB049585 AY358955 BC066876 BC067423 AK225478	19615	+	BC032810 BC040435 BC053345 BC061886 BC106721 BC071706 BC106722 NM_005543 S72482 AK302780 AY082014	46003	-	NM_001161359|FCHO1|23149|FCH domain only 1##NM_015122|FCHO1|23149|FCH domain only 1##AK316458|FCHO1|23149|FCH domain only 1##BC041130|FCHO1|23149|FCH domain only 1##NM_001161357|FCHO1|23149|FCH domain only 1##NM_001161358|FCHO1|23149|FCH domain only 1##AK291410|FCHO1|23149|FCH domain only 1##BC028021|FCHO1|23149|FCH domain only 1##DQ387861|MAP1S|55201|microtubule-associated protein 1S##NM_018174|MAP1S|55201|microtubule-associated protein 1S##AL834233|MAP1S|55201|microtubule-associated protein 1S##BC067115|MAP1S|55201|microtubule-associated protein 1S##BC080547|MAP1S|55201|microtubule-associated protein 1S##AJ440784|MAP1S|55201|microtubule-associated protein 1S##AK027623|MAP1S|55201|microtubule-associated protein 1S##BC113952|MAP1S|55201|microtubule-associated protein 1S##AK308975|MAP1S|55201|microtubule-associated protein 1S##NM_014256|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK075466|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK314323|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK075434|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AB015630|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK225421|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AB049585|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AY358955|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC066876|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC067423|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK225478|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC032810|INSL3|3640|insulin-like 3 (Leydig cell)##BC040435|INSL3|3640|insulin-like 3 (Leydig cell)##BC053345|INSL3|3640|insulin-like 3 (Leydig cell)##BC061886|INSL3|3640|insulin-like 3 (Leydig cell)##BC106721|INSL3|3640|insulin-like 3 (Leydig cell)##BC071706|INSL3|3640|insulin-like 3 (Leydig cell)##BC106722|INSL3|3640|insulin-like 3 (Leydig cell)##NM_005543|INSL3|3640|insulin-like 3 (Leydig cell)##S72482|INSL3|3640|insulin-like 3 (Leydig cell)##AK302780|INSL3|3640|insulin-like 3 (Leydig cell)##AY082014|INSL3|3640|insulin-like 3 (Leydig cell)	0.721142	CTCF.p2:-1:0.721
chr19	6049075	6049255	reg1000877.p4	6.383	+	AK299856 TSC_hg19_v1_chr19_-_5978306 NM_003624 NM_007320 NM_007322	-70881	-	AK025300 AK299260 AK314343 TSC_hg19_v1_chr19_-_5978152	-71014	-	CU678680 DQ234346 AK308205 TSC_hg19_v1_chr19_-_5978122 BC004349 AL050149 AK222813 AK301942 Y08698 AK222990	-71053	-	TSC_hg19_v1_chr19_-_6110512 AK291196 BC071571 X76091	61358	-	TSC_hg19_v1_chr19_-_6110613 BC028579 AK303321 NM_000635 NM_134433	61447	-	AY009107 BC022027 AK093433 AX748123 AK302604 AJ577571 NM_030924 BC090046 AL136854	86588	+	AK299856|RANBP3|8498|RAN binding protein 3##NM_003624|RANBP3|8498|RAN binding protein 3##NM_007320|RANBP3|8498|RAN binding protein 3##NM_007322|RANBP3|8498|RAN binding protein 3##AK025300|RANBP3|8498|RAN binding protein 3##AK299260|RANBP3|8498|RAN binding protein 3##AK314343|RANBP3|8498|RAN binding protein 3##DQ234346|RANBP3|8498|RAN binding protein 3##AK308205|RANBP3|8498|RAN binding protein 3##BC004349|RANBP3|8498|RAN binding protein 3##AL050149|RANBP3|8498|RAN binding protein 3##AK222813|RANBP3|8498|RAN binding protein 3##AK301942|RANBP3|8498|RAN binding protein 3##Y08698|RANBP3|8498|RAN binding protein 3##AK222990|RANBP3|8498|RAN binding protein 3##AK291196|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC071571|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##X76091|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##BC028579|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK303321|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_000635|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_134433|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AY009107|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC022027|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK093433|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK302604|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AJ577571|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##NM_030924|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC090046|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AL136854|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2	0.0	
chr2	169203408	169203589	reg1003074.p2	6.383	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	-99425	-	NM_020981	-528317	+	EF119711 EF119717 NM_001199144 NM_001199145	-1159706	+	TSC_hg19_v1_chr2_+_169312764 AK172775	109261	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	109377	+	AK093444 AX748130 NM_001171631	439550	+	BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##AK172775|CERS6|253782|ceramide synthase 6##NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6##AK093444|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171631|NOSTRIN|115677|nitric oxide synthase trafficker	0.0	
chr7	133675776	133675932	reg1023102.p1	6.383	+	TSC_hg19_v1_chr7_+_132937838 NM_001037126 NM_021807 AF380839 AK027688 AL831989 AK298191 BC067263 BC026174 CU693148 AB051486	-738005	+	TSC_hg19_v1_chr7_-_132766851 BC011596 BC014839 AK129533	-909008	-	AB528286 TSC_hg19_v1_chr7_-_132766813 AK294071 AK000427 NM_017812 AK310236	-909090	-	BC104897 BC104899 AK057348 NM_144648	136223	+	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	325769	-	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	325933	-	NM_001037126|EXOC4|60412|exocyst complex component 4##NM_021807|EXOC4|60412|exocyst complex component 4##AF380839|EXOC4|60412|exocyst complex component 4##AK027688|EXOC4|60412|exocyst complex component 4##AL831989|EXOC4|60412|exocyst complex component 4##AK298191|EXOC4|60412|exocyst complex component 4##BC067263|EXOC4|60412|exocyst complex component 4##BC026174|EXOC4|60412|exocyst complex component 4##AB051486|EXOC4|60412|exocyst complex component 4##BC011596|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC014839|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK129533|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK294071|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK000427|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##NM_017812|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK310236|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4	0.934644	CTCF.p2:33:0.935
chr7	137139079	137139202	reg1021507.p2	6.383	+	BC005916 TSC_hg19_v1_chr7_-_137028543 NM_002825 M57399	-110585	-	X52946 TSC_hg19_v1_chr7_-_137028443 AK313424	-110699	-	TSC_hg19_v1_chr7_-_137028371 AK290488	-110767	-	TSC_hg19_v1_chr7_-_137531587 NM_004717	392456	-	TSC_hg19_v1_chr7_+_137531690 BC047556	392592	+	TSC_hg19_v1_chr7_-_137620668 BC015585	481522	-	BC005916|PTN|5764|pleiotrophin##NM_002825|PTN|5764|pleiotrophin##M57399|PTN|5764|pleiotrophin##X52946|PTN|5764|pleiotrophin##AK313424|PTN|5764|pleiotrophin##AK290488|PTN|5764|pleiotrophin##NM_004717|DGKI|9162|diacylglycerol kinase, iota##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.992824	CTCF.p2:-3:0.993
chr11	43300298	43300426	reg1024135.p1	6.382	+	AB046800 NM_020929	-2984699	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-2985768	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-6680560	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	33156	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	33202	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	33278	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.679727	CTCF.p2:23:0.680
chr4	140656084	140656175	reg1022037.p1	6.382	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	-68995	+	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	-69139	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-178696	-	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	418209	-	NM_018717 TSC_hg19_v1_chr4_-_141075339	419203	-	AK027797 NM_032547	522310	+	AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)##NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)##AK027797|SCOC|60592|short coiled-coil protein##NM_032547|SCOC|60592|short coiled-coil protein	0.822837	CTCF.p2:1:0.823
chrX	113172387	113172500	reg1023568.p1	6.382	+	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	-1088381	-	AB384557 AY987378 NM_001113490	-1106090	-	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	-1249104	-	NM_000868 U49516 BC028688 AK295753 TSC_hg19_v1_chrX_+_113818558 M81778	646129	+	X95302 AK308523 GQ494004 U70981 AK291957 NM_000640 Y08768 AK309444	1079731	-	NM_001145346 AK301904	1251532	+	AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2##GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2##U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2##Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_001145346|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##AK301904|RBMXL3|139804|RNA binding motif protein, X-linked-like 3	0.30901	CTCF.p2:6:0.309
chr10	55893098	55893235	reg1020189.p1	6.381	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-1361740	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-1819051	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-2433819	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	667832	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	1465608	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	2227848	-	AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor	0.021945	
chr11	40743867	40743988	reg1022015.p2	6.381	+	AB046800 NM_020929	-428264	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-429333	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-4124125	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	2589591	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	2589637	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	2589713	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.041933	
chr21	37525472	37525564	reg1021322.p2	6.381	+	AB041012 NM_001236 AB124847 TSC_hg19_v1_chr21_+_37507383 AK223429 BC002812 AB004854 CR541709	-18169	+	TSC_hg19_v1_chr21_+_37442321 AK294142 J04056 AK308691 AK311219 BC015640 AK314879 BC002511 DQ892353 DQ895559 BT019843 CR541708	-83163	+	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	-83265	+	TSC_hg19_v1_chr21_-_37528616 AB004851 BC037580 BC047014	3113	-	AJ237839 NM_005128	11320	+	TSC_hg19_v1_chr21_+_37692548 BC058002 NM_015358 AK295133 BC007311 D50926 BC094779 BC132731 BC144116 AK292957 AB489143	167001	+	AB041012|CBR3|874|carbonyl reductase 3##NM_001236|CBR3|874|carbonyl reductase 3##AB124847|CBR3|874|carbonyl reductase 3##AK223429|CBR3|874|carbonyl reductase 3##BC002812|CBR3|874|carbonyl reductase 3##AB004854|CBR3|874|carbonyl reductase 3##CR541709|CBR3|874|carbonyl reductase 3##AK294142|CBR1|873|carbonyl reductase 1##J04056|CBR1|873|carbonyl reductase 1##AK308691|CBR1|873|carbonyl reductase 1##AK311219|CBR1|873|carbonyl reductase 1##BC015640|CBR1|873|carbonyl reductase 1##AK314879|CBR1|873|carbonyl reductase 1##BC002511|CBR1|873|carbonyl reductase 1##DQ892353|CBR1|873|carbonyl reductase 1##DQ895559|CBR1|873|carbonyl reductase 1##BT019843|CBR1|873|carbonyl reductase 1##CR541708|CBR1|873|carbonyl reductase 1##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1##AB004851|LOC100506428|100506428|uncharacterized LOC100506428##BC037580|LOC100506428|100506428|uncharacterized LOC100506428##BC047014|LOC100506428|100506428|uncharacterized LOC100506428##AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2##BC058002|MORC3|23515|MORC family CW-type zinc finger 3##NM_015358|MORC3|23515|MORC family CW-type zinc finger 3##AK295133|MORC3|23515|MORC family CW-type zinc finger 3##BC007311|MORC3|23515|MORC family CW-type zinc finger 3##D50926|MORC3|23515|MORC family CW-type zinc finger 3##BC094779|MORC3|23515|MORC family CW-type zinc finger 3##BC132731|MORC3|23515|MORC family CW-type zinc finger 3##BC144116|MORC3|23515|MORC family CW-type zinc finger 3##AK292957|MORC3|23515|MORC family CW-type zinc finger 3	0.969808	CTCF.p2:0:0.970
chr12	52608441	52608585	reg1025757.p1	6.380	+	BC117348 BC126393 BC038743 NM_001242696	-3950	-	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	-22769	-	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	-144715	+	NM_005556 TSC_hg19_v1_chr12_+_52626966	18449	+	TSC_hg19_v1_chr12_+_52627029 AK025881 AK128848 AF509887 AJ238246 X03212 AK128505 AK225498 BC002700 DQ892996 DQ896244 AB590146 CU678130	18530	+	AB527612 HQ258431 BC117465 BC117467 NM_002281	76760	-	BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80##BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##NM_005556|KRT7|3855|keratin 7##AK025881|KRT7|3855|keratin 7##AK128848|KRT7|3855|keratin 7##AF509887|KRT7|3855|keratin 7##AJ238246|KRT7|3855|keratin 7##X03212|KRT7|3855|keratin 7##AK128505|KRT7|3855|keratin 7##AK225498|KRT7|3855|keratin 7##BC002700|KRT7|3855|keratin 7##DQ892996|KRT7|3855|keratin 7##DQ896244|KRT7|3855|keratin 7##HQ258431|KRT81|3887|keratin 81##BC117465|KRT81|3887|keratin 81##BC117467|KRT81|3887|keratin 81##NM_002281|KRT81|3887|keratin 81	0.295947	CTCF.p2:-8:0.296
chr16	27702097	27702208	reg1023054.p2	6.380	+	TSC_hg19_v1_chr16_+_27561464 NM_015202 AB011128 BC150276 BC131508	-140688	+	TSC_hg19_v1_chr16_-_27561248 NM_001520 U02619	-140883	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	-140921	-	BC016460 NM_144675	197325	-	TSC_hg19_v1_chr16_-_28074776 AY358206 NM_001109763	372650	-	AY026388 BC130304 BC144189 TSC_hg19_v1_chr16_-_28222816 AK123846	520633	-	NM_015202|KIAA0556|23247|KIAA0556##AB011128|KIAA0556|23247|KIAA0556##BC150276|KIAA0556|23247|KIAA0556##BC131508|KIAA0556|23247|KIAA0556##NM_001520|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##U02619|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC016460|GSG1L|146395|GSG1-like##NM_144675|GSG1L|146395|GSG1-like##AY358206|GSG1L|146395|GSG1-like##NM_001109763|GSG1L|146395|GSG1-like##AY026388|XPO6|23214|exportin 6##BC130304|XPO6|23214|exportin 6##BC144189|XPO6|23214|exportin 6##AK123846|XPO6|23214|exportin 6	0.048983	
chr17	27175812	27175935	reg1021058.p1	6.380	+	BC021228 TSC_hg19_v1_chr17_-_27169811 BX647766 AK299477 AK001562 AK057665 NM_001077498 NM_018182	-6083	-	TSC_hg19_v1_chr17_-_27139467 AK095569	-36426	-	TSC_hg19_v1_chr17_+_27071025 NM_004295 BC001769 X80200 AK300804 AY937222 AY937223 AY937224 AY937225 AB529167 DQ892825 DQ896071 CU674876 AF082185	-104804	+	TSC_hg19_v1_chr17_+_27182033 AB049388 AK023342 AY007435 BX537542 BC019094 NM_005702 CU676380 DQ892626 DQ895866 AF082657 AF082658	6150	+	M60922 CU678570 AB528533 BC003683 TSC_hg19_v1_chr17_-_27224641	48735	-	TSC_hg19_v1_chr17_-_27224717 NM_004475	48839	-	BC021228|C17orf63|55731|chromosome 17 open reading frame 63##BX647766|C17orf63|55731|chromosome 17 open reading frame 63##AK299477|C17orf63|55731|chromosome 17 open reading frame 63##AK001562|C17orf63|55731|chromosome 17 open reading frame 63##AK057665|C17orf63|55731|chromosome 17 open reading frame 63##NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63##NM_018182|C17orf63|55731|chromosome 17 open reading frame 63##AK095569|C17orf63|55731|chromosome 17 open reading frame 63##NM_004295|TRAF4|9618|TNF receptor-associated factor 4##BC001769|TRAF4|9618|TNF receptor-associated factor 4##X80200|TRAF4|9618|TNF receptor-associated factor 4##AK300804|TRAF4|9618|TNF receptor-associated factor 4##AY937222|TRAF4|9618|TNF receptor-associated factor 4##AY937223|TRAF4|9618|TNF receptor-associated factor 4##AY937224|TRAF4|9618|TNF receptor-associated factor 4##DQ892825|TRAF4|9618|TNF receptor-associated factor 4##DQ896071|TRAF4|9618|TNF receptor-associated factor 4##AF082185|TRAF4|9618|TNF receptor-associated factor 4##AB049388|ERAL1|26284|Era G-protein-like 1 (E. coli)##AK023342|ERAL1|26284|Era G-protein-like 1 (E. coli)##AY007435|ERAL1|26284|Era G-protein-like 1 (E. coli)##BX537542|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC019094|ERAL1|26284|Era G-protein-like 1 (E. coli)##NM_005702|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ892626|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ895866|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082657|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082658|ERAL1|26284|Era G-protein-like 1 (E. coli)##M60922|FLOT2|2319|flotillin 2##BC003683|FLOT2|2319|flotillin 2##NM_004475|FLOT2|2319|flotillin 2	0.999562	CTCF.p2:-1:1.000
chr17	4270189	4270324	reg1023399.p1	6.380	+	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	-348	-	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	-545	-	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	-103105	-	AK172832 NM_182538 TSC_hg19_v1_chr17_+_4337247 BC023646	66986	+	NM_001124758 BC041772 TSC_hg19_v1_chr17_+_4402177 AB441165	131980	+	EU832503 BC050546 TSC_hg19_v1_chr17_-_4458680 AF147709 AK303150 AK301622 AK307948 NM_001105538 NM_014520	188418	-	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK172832|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_182538|SPNS3|201305|spinster homolog 3 (Drosophila)##BC023646|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_001124758|SPNS2|124976|spinster homolog 2 (Drosophila)##BC041772|SPNS2|124976|spinster homolog 2 (Drosophila)##AB441165|SPNS2|124976|spinster homolog 2 (Drosophila)##EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a##BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a##AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a##AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a##AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a##AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a	0.071514	
chr19	59031516	59031662	reg1015479.p4	6.380	+	TSC_hg19_v1_chr19_-_59031178 AK130056 AK027392	-401	-	BC024738 NM_032792 TSC_hg19_v1_chr19_-_59030968	-636	-	AB527212 TSC_hg19_v1_chr19_-_59023360 AK298446 AK123036 NM_012254	-8212	-	TSC_hg19_v1_chr19_+_59055826 AK225760 BC004978 NM_005762 BC052986	24243	+	TSC_hg19_v1_chr19_+_59055881 U95040	24299	+	U78773 TSC_hg19_v1_chr19_+_59056118 AK313478 AB385179	24481	+	AK027392|ZBTB45|84878|zinc finger and BTB domain containing 45##BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45##NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45##AK298446|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##AK123036|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##NM_012254|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##AK225760|TRIM28|10155|tripartite motif containing 28##BC004978|TRIM28|10155|tripartite motif containing 28##NM_005762|TRIM28|10155|tripartite motif containing 28##BC052986|TRIM28|10155|tripartite motif containing 28##U95040|TRIM28|10155|tripartite motif containing 28##U78773|TRIM28|10155|tripartite motif containing 28##AK313478|TRIM28|10155|tripartite motif containing 28	0.304968	CTCF.p2:-11:0.269
chr10	73675861	73675989	reg1022424.p1	6.379	+	TSC_hg19_v1_chr10_-_73611059 NM_001042465 NM_001042466 NM_002778	-64834	-	AK299184 TSC_hg19_v1_chr10_-_73611043	-64882	-	AK223290 AK293672 AK307721 TSC_hg19_v1_chr10_-_73611007 AK129790 J03077 AK057878 BC091483	-64908	-	TSC_hg19_v1_chr10_+_73723993 AB017915 NM_004273 AB012192	48132	+	AK292328 TSC_hg19_v1_chr10_-_73848270 AK294008 AK307091	172343	-	TSC_hg19_v1_chr10_-_73848286 AY358921	172357	-	NM_001042465|PSAP|5660|prosaposin##NM_001042466|PSAP|5660|prosaposin##NM_002778|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin##AK223290|PSAP|5660|prosaposin##AK293672|PSAP|5660|prosaposin##AK307721|PSAP|5660|prosaposin##AK129790|PSAP|5660|prosaposin##J03077|PSAP|5660|prosaposin##AK057878|PSAP|5660|prosaposin##BC091483|PSAP|5660|prosaposin##AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AY358921|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	0.0	
chr16	2346739	2346840	reg1020853.p1	6.379	+	U66675 TSC_hg19_v1_chr16_-_2336925	-9890	-	NM_080594 TSC_hg19_v1_chr16_-_2318415	-28369	-	TSC_hg19_v1_chr16_-_2318393 AK316132	-28397	-	AK310864 U78735 TSC_hg19_v1_chr16_-_2390699	43858	-	TSC_hg19_v1_chr16_-_2390730 BC151840	43933	-	TSC_hg19_v1_chr16_-_2390785 AB210044 NM_001089	43977	-	NM_080594|RNPS1|10921|RNA binding protein S1, serine-rich domain##AK316132|RNPS1|10921|RNA binding protein S1, serine-rich domain##AK310864|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##U78735|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##BC151840|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##AB210044|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3##NM_001089|ABCA3|21|ATP-binding cassette, sub-family A (ABC1), member 3	0.973068	CTCF.p2:-2:0.973
chr2	25500165	25500328	reg1023729.p1	6.379	+	TSC_hg19_v1_chr2_-_25475127 AF480163 NM_153759	-25040	-	TSC_hg19_v1_chr2_-_25468920 AK025230	-31268	-	TSC_hg19_v1_chr2_-_25467080 BC023612	-33111	-	TSC_hg19_v1_chr2_-_25536762 AB527956 EU446951	36561	-	AF067972 TSC_hg19_v1_chr2_-_25564801 BC043617 NM_022552	64553	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	65082	-	AF480163|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_153759|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##EU446951|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF067972|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC043617|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_022552|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	1.003722	CTCF.p2:24:0.975
chr2	28619740	28619890	reg1022594.p1	6.379	+	TSC_hg19_v1_chr2_+_28616369 AK315415 X16706 AB528427 CU692714 DQ893428 DQ896743 CR542262	-3342	+	TSC_hg19_v1_chr2_+_28616346 BC022791	-3465	+	TSC_hg19_v1_chr2_+_28615779 NM_005253	-4033	+	BC150633 NM_001170585 NM_153021 BC153864	99146	+	TSC_hg19_v1_chr2_+_28824770 BC042674	204968	+	TSC_hg19_v1_chr2_+_28974719 AK303682 AK295957 AK316532 NM_206876 NM_002709 BX647970 AK312329 BX647295 X80910	354859	+	AK315415|FOSL2|2355|FOS-like antigen 2##X16706|FOSL2|2355|FOS-like antigen 2##DQ893428|FOSL2|2355|FOS-like antigen 2##DQ896743|FOSL2|2355|FOS-like antigen 2##CR542262|FOSL2|2355|FOS-like antigen 2##BC022791|FOSL2|2355|FOS-like antigen 2##NM_005253|FOSL2|2355|FOS-like antigen 2##BC150633|PLB1|151056|phospholipase B1##NM_001170585|PLB1|151056|phospholipase B1##NM_153021|PLB1|151056|phospholipase B1##BC153864|PLB1|151056|phospholipase B1##BC042674|PLB1|151056|phospholipase B1##AK303682|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK295957|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK316532|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_206876|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_002709|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647970|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK312329|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647295|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##X80910|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	0.876639	CTCF.p2:13:0.877
chr3	15282977	15283105	reg1022707.p1	6.379	+	TSC_hg19_v1_chr3_+_15247768 AB028639 BC056202 AK314253 CU691130	-35087	+	TSC_hg19_v1_chr3_+_15247736 NM_014296	-35307	+	TSC_hg19_v1_chr3_-_15140655 AK291288 AK301735 AL833545 NM_022340	-142388	-	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	90900	-	TSC_hg19_v1_chr3_-_15374094 AL117422 AK313167 NM_004844	91056	-	BC006169 NM_001018009	99846	-	AB028639|CAPN7|23473|calpain 7##BC056202|CAPN7|23473|calpain 7##AK314253|CAPN7|23473|calpain 7##NM_014296|CAPN7|23473|calpain 7##AK291288|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AK301735|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AL833545|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_022340|ZFYVE20|64145|zinc finger, FYVE domain containing 20##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AL117422|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AK313167|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_004844|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC006169|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_001018009|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	0.622918	CTCF.p2:7:0.623
chr3	176148163	176148309	reg1023451.p1	6.379	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	-1571146	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	-1989516	+	BC032555 NM_014932	-3031993	+	TSC_hg19_v1_chr3_-_176914267 BX648935	766014	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	766715	-	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	766823	-	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.978003	CTCF.p2:11:0.978
chr7	114579895	114580005	reg1022921.p2	6.379	+	BC040713 TSC_hg19_v1_chr7_+_114562979 AY196485	-16994	+	TSC_hg19_v1_chr7_+_114562148 AF054589 NM_001166345 NM_001166346 NM_199072	-17776	+	AF467253 NM_001172767 NM_148899 U80741 AF467258 AF467259 TSC_hg19_v1_chr7_+_114066703	-513320	+	AJ608795 NM_001244583	1028416	-	TSC_hg19_v1_chr7_-_115670796 D43945 BC029891	1090836	-	TSC_hg19_v1_chr7_-_115670820 AK313546	1090868	-	BC040713|MDFIC|29969|MyoD family inhibitor domain containing##AY196485|MDFIC|29969|MyoD family inhibitor domain containing##AF054589|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166345|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166346|MDFIC|29969|MyoD family inhibitor domain containing##NM_199072|MDFIC|29969|MyoD family inhibitor domain containing##AF467253|FOXP2|93986|forkhead box P2##NM_001172767|FOXP2|93986|forkhead box P2##NM_148899|FOXP2|93986|forkhead box P2##AF467258|FOXP2|93986|forkhead box P2##AF467259|FOXP2|93986|forkhead box P2##AJ608795|TFEC|22797|transcription factor EC##NM_001244583|TFEC|22797|transcription factor EC##D43945|TFEC|22797|transcription factor EC##BC029891|TFEC|22797|transcription factor EC##AK313546|TFEC|22797|transcription factor EC	0.048467	
chrX	24260289	24260414	reg1023219.p1	6.379	+	X59739 X59740 TSC_hg19_v1_chrX_+_24167864	-92479	+	AB209892 NM_001178086 NM_001178095 X59738 TSC_hg19_v1_chrX_+_24167845 NM_001178084 NM_001178085 NM_003410	-92559	+	TSC_hg19_v1_chrX_+_24073072 AK222577 AK290397 AK312247 AB590041 CU676476 DQ891794 DQ894977 AB451230 AB451353 L19161	-187273	+	NM_001136233	71080	-	NM_001136234	120526	+	NM_001142386 NM_005391 AK301965 TSC_hg19_v1_chrX_+_24483405 BC015948 L42452 CU677533	223106	+	X59739|ZFX|7543|zinc finger protein, X-linked##X59740|ZFX|7543|zinc finger protein, X-linked##AB209892|ZFX|7543|zinc finger protein, X-linked##NM_001178086|ZFX|7543|zinc finger protein, X-linked##NM_001178095|ZFX|7543|zinc finger protein, X-linked##X59738|ZFX|7543|zinc finger protein, X-linked##NM_001178084|ZFX|7543|zinc finger protein, X-linked##NM_001178085|ZFX|7543|zinc finger protein, X-linked##NM_003410|ZFX|7543|zinc finger protein, X-linked##AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##NM_001136233|FAM48B2|170067|family with sequence similarity 48, member B2##NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1##NM_001142386|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_005391|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AK301965|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##BC015948|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##L42452|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3	0.997717	CTCF.p2:17:0.998
chr1	148598807	148598934	reg1021074.p2	6.378	+	NM_001102663 AK290302 AY894566	-21454	+	NM_173638 BC023087	-37953	+	NM_001170755 AK097180	-40643	+	NM_001144032	45140	+	NM_001102663 AK290302 AY894562 AY894566	140631	+	NM_001164261 NM_001164262	207144	+	NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_173638|NBPF15|284565|neuroblastoma breakpoint family, member 15##BC023087|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15##AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001144032|PPIAL4E|730262|peptidylprolyl isomerase A (cyclophilin A)-like 4E##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F	0.02351	
chr16	71401423	71401541	reg1024026.p2	6.378	+	TSC_hg19_v1_chr16_+_71392648 BC015484 X56667	-8838	+	NM_001740 NM_007088 AK222495 AK222648 AK291096 TSC_hg19_v1_chr16_+_71392625	-8861	+	BC034468 TSC_hg19_v1_chr16_-_71323306 AK226169 BX648660 AK315056 NM_001099642 AK123343 AF458590 NM_018348 BC035005	-78181	-	TSC_hg19_v1_chr16_-_71496127 AF507946 BC007256 NM_145911 BC048974 AK091039 AX746746 AK297130	94639	-	AK123826 TSC_hg19_v1_chr16_+_71496196	94706	+	AK292260 BC030658 AK057330 BC047091 NM_006961	121733	-	BC015484|CALB2|794|calbindin 2##X56667|CALB2|794|calbindin 2##NM_001740|CALB2|794|calbindin 2##NM_007088|CALB2|794|calbindin 2##AK222495|CALB2|794|calbindin 2##AK222648|CALB2|794|calbindin 2##AK291096|CALB2|794|calbindin 2##BC034468|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK226169|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BX648660|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK315056|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_001099642|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AF458590|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_018348|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BC035005|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AF507946|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC007256|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_145911|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC048974|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK091039|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK297130|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19	0.699007	CTCF.p2:1:0.664
chr18	21209484	21209607	reg1021974.p1	6.378	+	TSC_hg19_v1_chr18_-_21166458 AK295715 NM_000271	-43035	-	TSC_hg19_v1_chr18_-_21166428 BC063302 AF002020	-43137	-	TSC_hg19_v1_chr18_+_21083474 NM_013326 AK057192 AK295246 AK296230 AK294169 BC008305 BC002950	-126071	+	TSC_hg19_v1_chr18_-_21242592 CU688952 AK313667 AK057782 BC030622 NM_173505	33175	-	TSC_hg19_v1_chr18_+_21269416 AK096422	59869	+	TSC_hg19_v1_chr18_+_21269563 BC093406 NM_001127717 NM_198129 AY327115 AY327116	60042	+	AK295715|NPC1|4864|Niemann-Pick disease, type C1##NM_000271|NPC1|4864|Niemann-Pick disease, type C1##BC063302|NPC1|4864|Niemann-Pick disease, type C1##AF002020|NPC1|4864|Niemann-Pick disease, type C1##NM_013326|C18orf8|29919|chromosome 18 open reading frame 8##AK057192|C18orf8|29919|chromosome 18 open reading frame 8##AK295246|C18orf8|29919|chromosome 18 open reading frame 8##AK296230|C18orf8|29919|chromosome 18 open reading frame 8##AK294169|C18orf8|29919|chromosome 18 open reading frame 8##BC008305|C18orf8|29919|chromosome 18 open reading frame 8##BC002950|C18orf8|29919|chromosome 18 open reading frame 8##AK313667|ANKRD29|147463|ankyrin repeat domain 29##AK057782|ANKRD29|147463|ankyrin repeat domain 29##BC030622|ANKRD29|147463|ankyrin repeat domain 29##NM_173505|ANKRD29|147463|ankyrin repeat domain 29##AK096422|LAMA3|3909|laminin, alpha 3##BC093406|LAMA3|3909|laminin, alpha 3##NM_001127717|LAMA3|3909|laminin, alpha 3##NM_198129|LAMA3|3909|laminin, alpha 3##AY327115|LAMA3|3909|laminin, alpha 3##AY327116|LAMA3|3909|laminin, alpha 3	0.524612	CTCF.p2:-11:0.432
chr2	111873660	111873756	reg1004473.p1	6.378	+	AK300513 NM_001142807 BC022268	-383529	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-437886	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-438065	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	4779	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	767918	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	768053	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.0	
chr3	16570894	16571008	reg1022601.p1	6.378	+	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	-15727	-	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	-15933	-	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-264243	+	BX648638 AK303026 NM_001190811	75319	-	U65918 U66726 U66078 BC027595 NM_001351	76015	-	AB029015 NM_001144382	355500	+	D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2	0.928086	CTCF.p2:25:0.928
chr15	27136640	27136797	reg1020060.p1	6.377	+	L08485 AK290453 TSC_hg19_v1_chr15_+_27112237 NM_001165037	-24482	+	NM_000810	-24853	+	TSC_hg19_v1_chr15_-_27018924 AK315311 NM_021912	-117793	-	NM_033223 BC029850 BC045709 S82769	79829	+	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	1207715	-	AF071172 BC015486 BC142951 BC045544 NM_004667	1430553	-	L08485|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AK290453|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_001165037|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_000810|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AK315311|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_021912|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2	0.993013	CTCF.p2:-34:0.993
chr11	8340229	8340339	reg1020263.p2	6.376	+	BC069752 BC069793 M26682 NM_002315	-54932	-	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	-149721	-	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-237485	+	AK093251 AX748014 BC031231 NM_030906	275173	-	AK293193 TSC_hg19_v1_chr11_-_8615705	275419	-	TSC_hg19_v1_chr11_-_8615752 AK092720 AX747689 AK310754	275491	-	BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33##AK293193|STK33|65975|serine/threonine kinase 33##AK092720|STK33|65975|serine/threonine kinase 33##AK310754|STK33|65975|serine/threonine kinase 33	0.195067	
chr12	7294774	7294903	reg1024209.p1	6.376	+	TSC_hg19_v1_chr12_+_7282990 AK316059 NM_014718 AJ277460 BC111491 AK299177 BC104767 BC112283 AB527393 BC148258	-11714	+	DQ892613 DQ895853 AY007436 AF212239 NM_031491 AK311977 AK096947 AK223378 BC029355	-13408	-	BC128428 AF178985 TSC_hg19_v1_chr12_-_7261802 AK222802 BC062428 AK314299 AK024084 NM_016546	-33010	-	AK292256 NM_001131026	46920	+	TSC_hg19_v1_chr12_+_7342306 Z48054 AK299105 NM_001131023 NM_001131024 NM_001131025 AK302742 AK225126 AK312317 AK316250 AK303515	47516	+	BC010621 X84899 NM_000319 U19721 AB527550 DQ891142 DQ894321 CU679763	48126	+	AK316059|CLSTN3|9746|calsyntenin 3##NM_014718|CLSTN3|9746|calsyntenin 3##AJ277460|CLSTN3|9746|calsyntenin 3##BC111491|CLSTN3|9746|calsyntenin 3##AK299177|CLSTN3|9746|calsyntenin 3##BC104767|CLSTN3|9746|calsyntenin 3##BC112283|CLSTN3|9746|calsyntenin 3##BC148258|CLSTN3|9746|calsyntenin 3##DQ892613|RBP5|83758|retinol binding protein 5, cellular##DQ895853|RBP5|83758|retinol binding protein 5, cellular##AY007436|RBP5|83758|retinol binding protein 5, cellular##AF212239|RBP5|83758|retinol binding protein 5, cellular##NM_031491|RBP5|83758|retinol binding protein 5, cellular##AK311977|RBP5|83758|retinol binding protein 5, cellular##AK096947|RBP5|83758|retinol binding protein 5, cellular##AK223378|RBP5|83758|retinol binding protein 5, cellular##BC029355|RBP5|83758|retinol binding protein 5, cellular##AF178985|C1RL|51279|complement component 1, r subcomponent-like##AK222802|C1RL|51279|complement component 1, r subcomponent-like##BC062428|C1RL|51279|complement component 1, r subcomponent-like##AK314299|C1RL|51279|complement component 1, r subcomponent-like##AK024084|C1RL|51279|complement component 1, r subcomponent-like##NM_016546|C1RL|51279|complement component 1, r subcomponent-like##AK292256|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131026|PEX5|5830|peroxisomal biogenesis factor 5##Z48054|PEX5|5830|peroxisomal biogenesis factor 5##AK299105|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131023|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131024|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131025|PEX5|5830|peroxisomal biogenesis factor 5##AK302742|PEX5|5830|peroxisomal biogenesis factor 5##AK225126|PEX5|5830|peroxisomal biogenesis factor 5##AK312317|PEX5|5830|peroxisomal biogenesis factor 5##AK316250|PEX5|5830|peroxisomal biogenesis factor 5##AK303515|PEX5|5830|peroxisomal biogenesis factor 5##BC010621|PEX5|5830|peroxisomal biogenesis factor 5##X84899|PEX5|5830|peroxisomal biogenesis factor 5##NM_000319|PEX5|5830|peroxisomal biogenesis factor 5##U19721|PEX5|5830|peroxisomal biogenesis factor 5##DQ891142|PEX5|5830|peroxisomal biogenesis factor 5##DQ894321|PEX5|5830|peroxisomal biogenesis factor 5	0.998965	CTCF.p2:10:0.999
chr15	102417970	102418080	reg1020910.p1	6.376	+	AY792621 NM_001195021	-35704	+	BC137064 BC137065 NM_001001674	-59648	+	BC137002 BC137003 NM_001005326	-72114	+	NM_001004195 BC136848 BC136867 BC136907 BC136908 AY972818 AY972819	45264	-	AL137714 AK302089 TSC_hg19_v1_chr15_+_102501817 AK291582 BC047449 BC063470 AK292759 AK300161 AK308540 AK308566 AK309926 AK095183 BC027921 AK295256	83727	+	TSC_hg19_v1_chr15_+_102501827 AK024448 BC067227 DQ786211	83813	+	AY792621|GPCRLTM7|100272148|putative olfactory receptor GPCRLTM7##NM_001195021|GPCRLTM7|100272148|putative olfactory receptor GPCRLTM7##BC137064|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##BC137065|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##NM_001001674|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001004195|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136848|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136867|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136907|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136908|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##AY972818|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AY972819|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK292759|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK295256|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK024448|WASH1|100287171|WAS protein family homolog 1##BC067227|WASH3P|374666|WAS protein family homolog 3 pseudogene##DQ786211|LOC100134445|100134445|uncharacterized LOC100134445	0.996754	CTCF.p2:16:0.997
chr20	57427878	57427975	reg1018421.p2	6.376	+	AJ251759 TSC_hg19_v1_chr20_-_57425958	-1969	-	AF105253 NM_016592 TSC_hg19_v1_chr20_+_57414802	-13128	+	TSC_hg19_v1_chr20_+_57414770 BC036081	-13152	+	NM_001077490 NM_080425	109	+	TSC_hg19_v1_chr20_+_57464205 X56009	36268	+	TSC_hg19_v1_chr20_+_57466445 NM_000516 NM_001077488 NM_001077489 NM_080426 AK026564 AK225818 BC008855 BC089157	38431	+	AJ251759|GNAS-AS1|149775|GNAS antisense RNA 1 (non-protein coding)##AF105253|GNAS|2778|GNAS complex locus##NM_016592|GNAS|2778|GNAS complex locus##BC036081|GNAS|2778|GNAS complex locus##NM_001077490|GNAS|2778|GNAS complex locus##NM_080425|GNAS|2778|GNAS complex locus##X56009|GNAS|2778|GNAS complex locus##NM_000516|GNAS|2778|GNAS complex locus##NM_001077488|GNAS|2778|GNAS complex locus##NM_001077489|GNAS|2778|GNAS complex locus##NM_080426|GNAS|2778|GNAS complex locus##AK026564|GNAS|2778|GNAS complex locus##AK225818|GNAS|2778|GNAS complex locus##BC008855|GNAS|2778|GNAS complex locus##BC089157|GNAS|2778|GNAS complex locus	0.91597	CTCF.p2:-1:0.916
chr6	40518136	40518273	reg1024709.p1	6.376	+	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-615990	-	AB527188 AJ224328 NM_005943	-622819	-	NM_015345 AL833083 BC128388	-757386	+	BC142616 AB033072 NM_020737 AK291474	36940	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	488745	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	492142	+	AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2	0.947704	CTCF.p2:-5:0.948
chr10	97454044	97454219	reg1001667.p2	6.375	+	BC068449 DQ278872 NM_001143973 NM_015631	-232	-	BC061582 TSC_hg19_v1_chr10_-_97453684 CU686635 AY359022 AL050022 AK299141 AK075357 AK098295	-485	-	TSC_hg19_v1_chr10_-_97416598 NM_001017423 NM_002860	-37550	-	AJ133133 AJ133134 NM_001098175	17404	+	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	61409	+	AK294399 NM_001130446	213590	+	BC068449|TCTN3|26123|tectonic family member 3##DQ278872|TCTN3|26123|tectonic family member 3##NM_001143973|TCTN3|26123|tectonic family member 3##NM_015631|TCTN3|26123|tectonic family member 3##BC061582|TCTN3|26123|tectonic family member 3##AY359022|TCTN3|26123|tectonic family member 3##AL050022|TCTN3|26123|tectonic family member 3##AK299141|TCTN3|26123|tectonic family member 3##AK075357|TCTN3|26123|tectonic family member 3##AK098295|TCTN3|26123|tectonic family member 3##NM_001017423|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##NM_002860|ALDH18A1|5832|aldehyde dehydrogenase 18 family, member A1##AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131	0.0	
chr11	111475248	111475388	reg1023313.p1	6.375	+	TSC_hg19_v1_chr11_+_111473176 NM_015191 AK291233 AL136764 AB018324 AB096248 AK000396 BC113459 BC117183 AB084424	-2085	+	TSC_hg19_v1_chr11_-_111412453 AK096925	-62870	-	AY358554 TSC_hg19_v1_chr11_+_111411485 AK055654 AK296231 BC025407 AK298165	-63863	+	M65254 TSC_hg19_v1_chr11_-_111637059	161712	-	AB384965 DQ890606 DQ894107 EU176538 AK292275 AK293388 AK294716 TSC_hg19_v1_chr11_-_111637114 BC027596 AK296455 AK301705 AF087438 AF163473 NM_001177562 NM_001177563 NM_002716 NM_181699 NM_181700	161808	-	TSC_hg19_v1_chr11_-_111742001 NM_001077691 NM_001077692	266700	-	NM_015191|SIK2|23235|salt-inducible kinase 2##AK291233|SIK2|23235|salt-inducible kinase 2##AL136764|SIK2|23235|salt-inducible kinase 2##AB018324|SIK2|23235|salt-inducible kinase 2##AB096248|SIK2|23235|salt-inducible kinase 2##AK000396|SIK2|23235|salt-inducible kinase 2##BC113459|SIK2|23235|salt-inducible kinase 2##BC117183|SIK2|23235|salt-inducible kinase 2##AB084424|SIK2|23235|salt-inducible kinase 2##AY358554|LAYN|143903|layilin##AK055654|LAYN|143903|layilin##AK296231|LAYN|143903|layilin##BC025407|LAYN|143903|layilin##AK298165|LAYN|143903|layilin##M65254|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##DQ890606|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##DQ894107|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##EU176538|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK292275|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK293388|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK294716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##BC027596|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK296455|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK301705|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF087438|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF163473|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177562|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177563|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_002716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181699|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181700|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001077691|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_001077692|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)	0.0	
chr13	28345094	28345219	reg1024566.p1	6.375	+	AK000623 TSC_hg19_v1_chr13_+_28196032 AB464657 AB527907 CU677257	-149082	+	TSC_hg19_v1_chr13_+_28196028 AF077044 AK097973 AK311833	-149130	+	TSC_hg19_v1_chr13_+_28196018 BC054519	-149136	+	AB044157 NM_145657 AB463700	21645	+	TSC_hg19_v1_chr13_+_28494136 NM_000209 X99894 U30329 U35632 AB464648	149048	+	CU677005 AB463470 DQ893626 EU176674 U51096 TSC_hg19_v1_chr13_-_28543282	198056	-	AK000623|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AF077044|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK097973|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK311833|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##BC054519|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AB044157|GSX1|219409|GS homeobox 1##NM_145657|GSX1|219409|GS homeobox 1##NM_000209|PDX1|3651|pancreatic and duodenal homeobox 1##X99894|PDX1|3651|pancreatic and duodenal homeobox 1##U30329|PDX1|3651|pancreatic and duodenal homeobox 1##U35632|PDX1|3651|pancreatic and duodenal homeobox 1##DQ893626|CDX2|1045|caudal type homeobox 2##EU176674|CDX2|1045|caudal type homeobox 2##U51096|CDX2|1045|caudal type homeobox 2	0.995711	CTCF.p2:-10:0.996
chr13	92299771	92299880	reg1021894.p1	6.375	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-248921	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3974956	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5926386	-	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1579602	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	2832001	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	2948604	-	BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase	0.832938	CTCF.p2:-18:0.833
chr16	30825714	30825845	reg1021987.p1	6.375	+	TSC_hg19_v1_chr16_-_30798510 AB002324 NM_001080417	-27382	-	TSC_hg19_v1_chr16_-_30787317 AK057076	-38448	-	TSC_hg19_v1_chr16_+_30773642 AK297531 AK304521 AK027406 AK293710 BX640763 CR627431 AK291666 AK131310 AK294258 AF122819 AB014561 BC006133 BC011769 BC018647	-52137	+	BC010017 AJ223980 CU691314 TSC_hg19_v1_chr16_-_30905327	79522	-	TSC_hg19_v1_chr16_-_30905377 BC019071 NM_004765	79616	-	TSC_hg19_v1_chr16_-_30905474 BC058863	79757	-	AB002324|ZNF629|23361|zinc finger protein 629##NM_001080417|ZNF629|23361|zinc finger protein 629##AK297531|RNF40|9810|ring finger protein 40##AK304521|RNF40|9810|ring finger protein 40##AK027406|RNF40|9810|ring finger protein 40##AK293710|RNF40|9810|ring finger protein 40##BX640763|RNF40|9810|ring finger protein 40##CR627431|RNF40|9810|ring finger protein 40##AK291666|RNF40|9810|ring finger protein 40##AK131310|RNF40|9810|ring finger protein 40##AK294258|RNF40|9810|ring finger protein 40##AF122819|RNF40|9810|ring finger protein 40##AB014561|RNF40|9810|ring finger protein 40##BC006133|RNF40|9810|ring finger protein 40##BC011769|RNF40|9810|ring finger protein 40##BC018647|RNF40|9810|ring finger protein 40##AJ223980|BCL7C|9274|B-cell CLL/lymphoma 7C##BC019071|BCL7C|9274|B-cell CLL/lymphoma 7C##NM_004765|BCL7C|9274|B-cell CLL/lymphoma 7C##BC058863|BCL7C|9274|B-cell CLL/lymphoma 7C	0.998434	CTCF.p2:-8:0.998
chr9	21195278	21195384	reg1019451.p1	6.375	+	AB590745 HQ258102 HQ258746 BC074965 BC074966 BC113640 BC113642 NM_021068 M27318	-7732	-	CU686757 AB590744 BC101638 BC101640 BC069329 BC069372 BC069408 V00540 BC096699 M12350 M28586 NM_002175 X00145	-28698	-	NM_002177	-53188	-	BC074991 BC074992 BC113994 BC114000 M34913 NM_021057	6871	-	BC069409 BC103972 BC103973 NM_002171 V00551	11810	-	AB463792 M28585 NM_002173 X00140	21975	-	HQ258102|IFNA4|3441|interferon, alpha 4##HQ258746|IFNA4|3441|interferon, alpha 4##BC074965|IFNA4|3441|interferon, alpha 4##BC074966|IFNA4|3441|interferon, alpha 4##BC113640|IFNA4|3441|interferon, alpha 4##BC113642|IFNA4|3441|interferon, alpha 4##NM_021068|IFNA4|3441|interferon, alpha 4##M27318|IFNA4|3441|interferon, alpha 4##BC101638|IFNA21|3452|interferon, alpha 21##BC101640|IFNA21|3452|interferon, alpha 21##BC069329|IFNA21|3452|interferon, alpha 21##BC069372|IFNA21|3452|interferon, alpha 21##BC069408|IFNA21|3452|interferon, alpha 21##V00540|IFNA21|3452|interferon, alpha 21##BC096699|IFNA21|3452|interferon, alpha 21##M12350|IFNA21|3452|interferon, alpha 21##M28586|IFNA21|3452|interferon, alpha 21##NM_002175|IFNA21|3452|interferon, alpha 21##X00145|IFNA21|3452|interferon, alpha 21##NM_002177|IFNW1|3467|interferon, omega 1##BC074991|IFNA7|3444|interferon, alpha 7##BC074992|IFNA7|3444|interferon, alpha 7##BC113994|IFNA7|3444|interferon, alpha 7##BC114000|IFNA7|3444|interferon, alpha 7##M34913|IFNA7|3444|interferon, alpha 7##NM_021057|IFNA7|3444|interferon, alpha 7##BC069409|IFNA10|3446|interferon, alpha 10##BC103972|IFNA10|3446|interferon, alpha 10##BC103973|IFNA10|3446|interferon, alpha 10##NM_002171|IFNA10|3446|interferon, alpha 10##V00551|IFNA10|3446|interferon, alpha 10##M28585|IFNA16|3449|interferon, alpha 16##NM_002173|IFNA16|3449|interferon, alpha 16##X00140|IFNA16|3449|interferon, alpha 16	0.464497	CTCF.p2:-3:0.464
chr15	78608169	78608270	reg1021781.p1	6.373	+	TSC_hg19_v1_chr15_-_78591935 AF127799 AF100786 BC010080 AK311320 BC002565 AK024754 NM_025234 AK300838 AK304617 AK310477	-16246	-	BC031044 NM_001130183	-49679	+	TSC_hg19_v1_chr15_+_78556901 AK096616 NM_001130182	-51275	+	TSC_hg19_v1_chr15_+_78632694 NM_004378 AB593091 BC022069 S74445 DQ896830 EU176284 CR457017 AL110113	24484	+	TSC_hg19_v1_chr15_+_78730557 NM_004136	122302	+	TSC_hg19_v1_chr15_+_78730595 AB209403 BC017880 AK292992 BC117481 BC117483 BC143948 AB586699 HQ258663 M58511	122404	+	AF127799|WDR61|80349|WD repeat domain 61##AF100786|WDR61|80349|WD repeat domain 61##BC010080|WDR61|80349|WD repeat domain 61##AK311320|WDR61|80349|WD repeat domain 61##AK024754|WDR61|80349|WD repeat domain 61##NM_025234|WDR61|80349|WD repeat domain 61##AK300838|WDR61|80349|WD repeat domain 61##AK304617|WDR61|80349|WD repeat domain 61##BC031044|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_001130183|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##AK096616|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_001130182|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_004378|CRABP1|1381|cellular retinoic acid binding protein 1##AB593091|CRABP1|1381|cellular retinoic acid binding protein 1##BC022069|CRABP1|1381|cellular retinoic acid binding protein 1##S74445|CRABP1|1381|cellular retinoic acid binding protein 1##DQ896830|CRABP1|1381|cellular retinoic acid binding protein 1##EU176284|CRABP1|1381|cellular retinoic acid binding protein 1##CR457017|CRABP1|1381|cellular retinoic acid binding protein 1##AL110113|CRABP1|1381|cellular retinoic acid binding protein 1##NM_004136|IREB2|3658|iron-responsive element binding protein 2##AB209403|IREB2|3658|iron-responsive element binding protein 2##BC017880|IREB2|3658|iron-responsive element binding protein 2##AK292992|IREB2|3658|iron-responsive element binding protein 2##BC117481|IREB2|3658|iron-responsive element binding protein 2##BC117483|IREB2|3658|iron-responsive element binding protein 2##BC143948|IREB2|3658|iron-responsive element binding protein 2##HQ258663|IREB2|3658|iron-responsive element binding protein 2##M58511|IREB2|3658|iron-responsive element binding protein 2	0.982035	CTCF.p2:-18:0.982
chr20	46958763	46958890	reg1022512.p1	6.373	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-543508	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-544074	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-828142	+	AB037836 TSC_hg19_v1_chr20_-_47444291	485460	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	485613	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	579492	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.61172	CTCF.p2:8:0.612
chr20	62259720	62259888	reg1022273.p1	6.373	+	TSC_hg19_v1_chr20_-_62258426 AK298927	-1367	-	AB033095 TSC_hg19_v1_chr20_-_62258409 BC036305 NM_012384	-1429	-	TSC_hg19_v1_chr20_-_62205593 AB232667 BC035130 AK023724 NM_001037335	-54216	-	DQ893121 DQ896397 BC047671 BC021084 BC032527 AF069709 BC056873 TSC_hg19_v1_chr20_-_62284781 AK074860 NM_015894 AK310010 BC009381 BC025234	24956	-	AF217795 NM_016434 NM_032957	29358	+	TSC_hg19_v1_chr20_+_62289667 AK302508 AK304798 AK299332 BC000673	29877	+	AK298927|GMEB2|26205|glucocorticoid modulatory element binding protein 2##AB033095|GMEB2|26205|glucocorticoid modulatory element binding protein 2##BC036305|GMEB2|26205|glucocorticoid modulatory element binding protein 2##NM_012384|GMEB2|26205|glucocorticoid modulatory element binding protein 2##AB232667|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC035130|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##AK023724|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##NM_001037335|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##DQ893121|STMN3|50861|stathmin-like 3##DQ896397|STMN3|50861|stathmin-like 3##BC047671|STMN3|50861|stathmin-like 3##BC032527|STMN3|50861|stathmin-like 3##AF069709|STMN3|50861|stathmin-like 3##BC056873|STMN3|50861|stathmin-like 3##AK074860|STMN3|50861|stathmin-like 3##NM_015894|STMN3|50861|stathmin-like 3##AK310010|STMN3|50861|stathmin-like 3##BC009381|STMN3|50861|stathmin-like 3##BC025234|STMN3|50861|stathmin-like 3##AF217795|RTEL1|51750|regulator of telomere elongation helicase 1##NM_016434|RTEL1|51750|regulator of telomere elongation helicase 1##NM_032957|RTEL1|51750|regulator of telomere elongation helicase 1##AK302508|RTEL1|51750|regulator of telomere elongation helicase 1##AK304798|RTEL1|51750|regulator of telomere elongation helicase 1##AK299332|RTEL1|51750|regulator of telomere elongation helicase 1	0.0	
chr17	71307230	71307335	reg1021792.p1	6.372	+	BC157870 NM_001129885	-49264	-	BC005005 TSC_hg19_v1_chr17_+_71229423	-77892	+	TSC_hg19_v1_chr17_+_71228800 AY163812 NM_001100621 NM_001100622 NM_017941 AL136740 AK000728	-78476	+	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	858	-	NM_001144952	332944	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	892533	+	BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##BC005005|C17orf80|55028|chromosome 17 open reading frame 80##AY163812|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100621|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100622|C17orf80|55028|chromosome 17 open reading frame 80##NM_017941|C17orf80|55028|chromosome 17 open reading frame 80##AL136740|C17orf80|55028|chromosome 17 open reading frame 80##AK000728|C17orf80|55028|chromosome 17 open reading frame 80##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38	0.0	
chr9	38620605	38620767	reg1019166.p1	6.372	+	TSC_hg19_v1_chr9_-_38620602 BC056266	-63	-	AB385522 AB095935 BC152434 NM_147195	-365	-	TSC_hg19_v1_chr9_-_38424452 AB463783 NM_001007563	-196221	-	AB385498 AK294281 AB051501 BC132737 BC144130 AK056833 NM_033655	667494	-	AK302569 NM_001040065 NM_001085452 BC146855	734999	+	AK302569 NM_001040065 NM_001085452 BC146855	1264275	+	BC056266|ANKRD18A|253650|ankyrin repeat domain 18A##AB095935|ANKRD18A|253650|ankyrin repeat domain 18A##BC152434|ANKRD18A|253650|ankyrin repeat domain 18A##NM_147195|ANKRD18A|253650|ankyrin repeat domain 18A##NM_001007563|IGFBPL1|347252|insulin-like growth factor binding protein-like 1##AK294281|CNTNAP3|79937|contactin associated protein-like 3##AB051501|CNTNAP3|79937|contactin associated protein-like 3##BC132737|CNTNAP3|79937|contactin associated protein-like 3##BC144130|CNTNAP3|79937|contactin associated protein-like 3##AK056833|CNTNAP3|79937|contactin associated protein-like 3##NM_033655|CNTNAP3|79937|contactin associated protein-like 3##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2	0.987836	CTCF.p2:-4:0.988
chr12	22862398	22862511	reg1024073.p1	6.371	+	TSC_hg19_v1_chr12_+_22778130 CU688188 BC006111 AL137750 AK074425	-84307	+	AF207600 TSC_hg19_v1_chr12_+_22778077 BC066907 NM_001039481 NM_018638	-84411	+	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	-164988	-	NM_178010 AK098610 AK223536	875072	-	AK074317 TSC_hg19_v1_chr12_-_24102605 BC065532 AB081589 NM_006940	1240148	-	TSC_hg19_v1_chr12_-_24103855 AK299607 AK096569	1241400	-	BC006111|ETNK1|55500|ethanolamine kinase 1##AL137750|ETNK1|55500|ethanolamine kinase 1##AK074425|ETNK1|55500|ethanolamine kinase 1##AF207600|ETNK1|55500|ethanolamine kinase 1##BC066907|ETNK1|55500|ethanolamine kinase 1##NM_001039481|ETNK1|55500|ethanolamine kinase 1##NM_018638|ETNK1|55500|ethanolamine kinase 1##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528##NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5##AK098610|SOX5|6660|SRY (sex determining region Y)-box 5##AK223536|SOX5|6660|SRY (sex determining region Y)-box 5##AK074317|SOX5|6660|SRY (sex determining region Y)-box 5##BC065532|SOX5|6660|SRY (sex determining region Y)-box 5##AB081589|SOX5|6660|SRY (sex determining region Y)-box 5##NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5##AK299607|SOX5|6660|SRY (sex determining region Y)-box 5##AK096569|SOX5|6660|SRY (sex determining region Y)-box 5	0.787443	CTCF.p2:-17:0.787
chr1	48221240	48221335	reg1021705.p1	6.371	+	AF042832 NM_004474	-319599	+	AF275722 NM_012186	-339544	+	TSC_hg19_v1_chr1_+_47799646 AF259961	-421646	+	NM_001194986	241274	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	467105	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	716391	-	AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##NM_001194986|LOC388630|388630|UPF0632 protein A##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6	0.999849	CTCF.p2:-3:1.000
chr2	223348345	223348445	reg1021135.p2	6.371	+	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	-59088	+	TSC_hg19_v1_chr2_+_223289261 AK314322	-59155	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	-184870	-	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	172399	-	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	188014	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	377352	+	AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AK314322|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3	0.072486	
chr19	42461925	42462013	reg1003038.p1	6.370	+	NM_199002 TSC_hg19_v1_chr19_+_42388510 BC034013 BC067262	-73483	+	TSC_hg19_v1_chr19_+_42387309 U64105	-74651	+	BC064996 TSC_hg19_v1_chr19_+_42387266 NM_004706 NM_198977 BC011726	-74692	+	AF112996 BT019964 CR457214 CR542116 AB590878 AF112202 AJ133534 BC008950 TSC_hg19_v1_chr19_-_42463499	1499	-	TSC_hg19_v1_chr19_-_42463500 NM_006423	1551	-	AK295833 TSC_hg19_v1_chr19_-_42498254	36268	-	NM_199002|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC034013|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC067262|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##U64105|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC064996|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_004706|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_198977|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC011726|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)##BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)##CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)##CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)##AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)##AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)##BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)##NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)##AK295833|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide	0.0	
chr2	143440207	143440318	reg1021960.p1	6.370	+	AF176832 NM_018557	-550993	-	TSC_hg19_v1_chr2_-_142888540 AK054663	-551706	-	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-3902456	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	194944	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	194978	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	446668	+	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15	0.33705	CTCF.p2:-16:0.337
chr6_mann_hap4	2713890	2714014	reg1022022.p1	6.370	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr11	62380005	62380150	reg1021366.p3	6.369	+	TSC_hg19_v1_chr11_-_62369338 NM_004739	-10781	-	TSC_hg19_v1_chr11_-_62369236 AB016591	-10849	-	TSC_hg19_v1_chr11_-_62369137 BC023656 BC053650	-10940	-	TSC_hg19_v1_chr11_-_62380215 NM_153265	150	-	NM_000327 AK313674 DQ426890	197	+	TSC_hg19_v1_chr11_-_62389457 AJ005865 CU675855 BC071961 BC007906 AB009598 BC019832 AK297970 AK310200 AK316228	9340	-	NM_004739|MTA2|9219|metastasis associated 1 family, member 2##AB016591|MTA2|9219|metastasis associated 1 family, member 2##BC023656|MTA2|9219|metastasis associated 1 family, member 2##BC053650|MTA2|9219|metastasis associated 1 family, member 2##NM_153265|EML3|256364|echinoderm microtubule associated protein like 3##NM_000327|ROM1|6094|retinal outer segment membrane protein 1##AK313674|ROM1|6094|retinal outer segment membrane protein 1##DQ426890|ROM1|6094|retinal outer segment membrane protein 1##AJ005865|B3GAT3|26229|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)##BC071961|B3GAT3|26229|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)##BC007906|B3GAT3|26229|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)##AB009598|B3GAT3|26229|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)##BC019832|B3GAT3|26229|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)##AK297970|B3GAT3|26229|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)##AK310200|B3GAT3|26229|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)##AK316228|B3GAT3|26229|beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	1.11035	CTCF.p2:13:0.888	CTCF.p2:-20:0.223
chr12	124950831	124950989	reg1018586.p1	6.369	+	AK126577 NM_181709	-177201	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-493181	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-493711	-	TSC_hg19_v1_chr12_-_125002875 BC033087	51949	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	101165	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	397395	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr19	42104078	42104177	reg1022926.p2	6.369	+	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	-21550	+	NM_001130514	-155065	+	TSC_hg19_v1_chr19_-_41945831 AK298197 NM_001167869 NM_001167870 NM_001167871 NM_018035	-158294	-	D90276 AK298701 NM_001817	29307	-	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	88025	-	TSC_hg19_v1_chr19_+_42212531 NM_004363	108401	+	BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##AK298197|ATP5SL|55101|ATP5S-like##NM_001167869|ATP5SL|55101|ATP5S-like##NM_001167870|ATP5SL|55101|ATP5S-like##NM_001167871|ATP5SL|55101|ATP5S-like##NM_018035|ATP5SL|55101|ATP5S-like##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_004363|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5	0.976727	CTCF.p2:-15:0.977
chr2	233626172	233626301	reg1020973.p1	6.369	+	TSC_hg19_v1_chr2_+_233562045 BX538172 AB014542 BC146775 BX538321 BC043402 BC093090 BC029456 BX537885	-64175	+	TSC_hg19_v1_chr2_+_233562040 BX647505 AK001739 AK297162 AK299418 AY176045	-64201	+	TSC_hg19_v1_chr2_+_233562019 NM_001103146 NM_001103147 NM_001103148 NM_015575	-64227	+	AF061118 AJ007557 AK314019 BC037290 NM_001172416 NM_001172417 NM_002242	15013	-	TSC_hg19_v1_chr2_+_233709119 BC008072	82885	+	AY358535 NM_206895 BC130307 BC130309	108758	+	BX538172|GIGYF2|26058|GRB10 interacting GYF protein 2##AB014542|GIGYF2|26058|GRB10 interacting GYF protein 2##BC146775|GIGYF2|26058|GRB10 interacting GYF protein 2##BX538321|GIGYF2|26058|GRB10 interacting GYF protein 2##BC043402|GIGYF2|26058|GRB10 interacting GYF protein 2##BC093090|GIGYF2|26058|GRB10 interacting GYF protein 2##BC029456|GIGYF2|26058|GRB10 interacting GYF protein 2##BX537885|GIGYF2|26058|GRB10 interacting GYF protein 2##BX647505|GIGYF2|26058|GRB10 interacting GYF protein 2##AK001739|GIGYF2|26058|GRB10 interacting GYF protein 2##AK297162|GIGYF2|26058|GRB10 interacting GYF protein 2##AK299418|GIGYF2|26058|GRB10 interacting GYF protein 2##AY176045|GIGYF2|26058|GRB10 interacting GYF protein 2##NM_001103146|GIGYF2|26058|GRB10 interacting GYF protein 2##NM_001103147|GIGYF2|26058|GRB10 interacting GYF protein 2##NM_001103148|GIGYF2|26058|GRB10 interacting GYF protein 2##NM_015575|GIGYF2|26058|GRB10 interacting GYF protein 2##AF061118|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##AJ007557|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##AK314019|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##BC037290|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##NM_001172416|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##NM_001172417|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##NM_002242|KCNJ13|3769|potassium inwardly-rectifying channel, subfamily J, member 13##BC008072|GIGYF2|26058|GRB10 interacting GYF protein 2##AY358535|C2orf82|389084|chromosome 2 open reading frame 82##NM_206895|C2orf82|389084|chromosome 2 open reading frame 82##BC130307|C2orf82|389084|chromosome 2 open reading frame 82##BC130309|C2orf82|389084|chromosome 2 open reading frame 82	0.660425	CTCF.p2:-17:0.660
chr5	76733140	76733256	reg1016700.p1	6.369	+	AF079529 AY129948 AY129949 NM_001029851 NM_001029852 NM_001029853 NM_001029854 NM_003719 AB085824 AB085825 AB085826 AB085827 AL831924	-226408	+	AK098256 TSC_hg19_v1_chr5_+_76435100	-298112	+	TSC_hg19_v1_chr5_-_76383029 BC007239 NM_032367 AK223624	-350155	-	TSC_hg19_v1_chr5_-_76788048 AK293316 AK295249 CU691838 AK304329 AK023977 AF115511 BC040241	54868	-	AK296423 AK300058 TSC_hg19_v1_chr5_-_76788142 AK021855	54947	-	TSC_hg19_v1_chr5_-_76788333 AK001766 BC001807 NM_018268	55117	-	AF079529|PDE8B|8622|phosphodiesterase 8B##AY129948|PDE8B|8622|phosphodiesterase 8B##AY129949|PDE8B|8622|phosphodiesterase 8B##NM_001029851|PDE8B|8622|phosphodiesterase 8B##NM_001029852|PDE8B|8622|phosphodiesterase 8B##NM_001029853|PDE8B|8622|phosphodiesterase 8B##NM_001029854|PDE8B|8622|phosphodiesterase 8B##NM_003719|PDE8B|8622|phosphodiesterase 8B##AB085824|PDE8B|8622|phosphodiesterase 8B##AB085825|PDE8B|8622|phosphodiesterase 8B##AB085826|PDE8B|8622|phosphodiesterase 8B##AB085827|PDE8B|8622|phosphodiesterase 8B##AL831924|PDE8B|8622|phosphodiesterase 8B##BC007239|ZBED3|84327|zinc finger, BED-type containing 3##NM_032367|ZBED3|84327|zinc finger, BED-type containing 3##AK223624|ZBED3|84327|zinc finger, BED-type containing 3##AK293316|WDR41|55255|WD repeat domain 41##AK295249|WDR41|55255|WD repeat domain 41##AK304329|WDR41|55255|WD repeat domain 41##AK023977|WDR41|55255|WD repeat domain 41##AF115511|WDR41|55255|WD repeat domain 41##BC040241|WDR41|55255|WD repeat domain 41##AK296423|WDR41|55255|WD repeat domain 41##AK300058|WDR41|55255|WD repeat domain 41##AK021855|WDR41|55255|WD repeat domain 41##AK001766|WDR41|55255|WD repeat domain 41##BC001807|WDR41|55255|WD repeat domain 41##NM_018268|WDR41|55255|WD repeat domain 41	0.906334	CTCF.p2:29:0.906
chr7	144134812	144134952	reg1024335.p1	6.369	+	NM_001080413 AB528776	-27563	-	AK160365 TSC_hg19_v1_chr7_+_144052469 NM_005435 CR749203 BC136661	-82379	+	NM_001001802 NM_001005287	-119665	+	TSC_hg19_v1_chr7_-_144533086 AK091736	398207	-	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	398254	-	NM_014141	1678570	+	NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_001001802|OR2A42|402317|olfactory receptor, family 2, subfamily A, member 42##NM_001005287|OR2A1|346528|olfactory receptor, family 2, subfamily A, member 1##AK091736|TPK1|27010|thiamin pyrophosphokinase 1##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##NM_014141|CNTNAP2|26047|contactin associated protein-like 2	0.997567	CTCF.p2:5:0.998
chr15	70655387	70655522	reg1021036.p1	6.368	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-265211	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-265227	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-313545	-	TSC_hg19_v1_chr15_-_70878946 BC040579	223490	-	BC016881 AL834243 NM_001008224 AK055435	339173	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	400388	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.108106	
chr17	72280959	72281065	reg1017262.p1	6.368	+	BC039582 NM_001172810 NM_023036 BC033013 AF250288	-10606	+	BX647912 NM_052869	-36508	+	TSC_hg19_v1_chr17_+_72209709 NM_032646 BC107492 BC107602 AK315163 AF319952 BC005168	-71343	+	NM_153209 TSC_hg19_v1_chr17_+_72322355 BC067749 BC026362 BC110989 AK094619 BC143327 BC093631 BC104852	41395	+	NM_001080466	76945	-	BC143807 AB196530 AB528868 AY288421 NM_181790	82582	+	BC039582|DNAI2|64446|dynein, axonemal, intermediate chain 2##NM_001172810|DNAI2|64446|dynein, axonemal, intermediate chain 2##NM_023036|DNAI2|64446|dynein, axonemal, intermediate chain 2##BC033013|DNAI2|64446|dynein, axonemal, intermediate chain 2##AF250288|DNAI2|64446|dynein, axonemal, intermediate chain 2##BX647912|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_052869|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_032646|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107492|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107602|TTYH2|94015|tweety homolog 2 (Drosophila)##AK315163|TTYH2|94015|tweety homolog 2 (Drosophila)##AF319952|TTYH2|94015|tweety homolog 2 (Drosophila)##BC005168|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_153209|KIF19|124602|kinesin family member 19##BC067749|KIF19|124602|kinesin family member 19##BC026362|KIF19|124602|kinesin family member 19##BC110989|KIF19|124602|kinesin family member 19##AK094619|KIF19|124602|kinesin family member 19##BC143327|KIF19|124602|kinesin family member 19##BC093631|KIF19|124602|kinesin family member 19##BC104852|KIF19|124602|kinesin family member 19##NM_001080466|BTBD17|388419|BTB (POZ) domain containing 17##BC143807|GPR142|350383|G protein-coupled receptor 142##AB196530|GPR142|350383|G protein-coupled receptor 142##AY288421|GPR142|350383|G protein-coupled receptor 142##NM_181790|GPR142|350383|G protein-coupled receptor 142	0.0	
chr5	170323868	170323959	reg1021136.p1	6.368	+	TSC_hg19_v1_chr5_+_170289029 AJ271459 AJ288952 AJ288953 AJ288954 AJ288955 BC030953 AF222747 AB527205 AL832980	-34891	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	-34982	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	-113159	+	BC017291 NM_021025 DQ892654 DQ895893 DQ896085	412415	+	NM_001037738 NM_002520 NM_199185 TSC_hg19_v1_chr5_+_170814855 D28343 AK290652 BC008495 BC107754 BC012566 BC021668 DQ303464 BC016716 BC016768 BC016824 BC021983 BC014349 BC002398 M23613 M26697 BC020467 BC050628 M28699 AY740634 AY740635 AY740636 AY740637 AY740638 AY740639 AY740640 BC063542	490884	+	AB042278 AB451236 AB451361 AB463949 BT007011 CU676967 CU677717 CU680364 CU692436 DQ892032 DQ895223 EF429251 X16934 TSC_hg19_v1_chr5_+_170815031	491078	+	AJ271459|RANBP17|64901|RAN binding protein 17##AJ288952|RANBP17|64901|RAN binding protein 17##AJ288953|RANBP17|64901|RAN binding protein 17##AJ288954|RANBP17|64901|RAN binding protein 17##AJ288955|RANBP17|64901|RAN binding protein 17##BC030953|RANBP17|64901|RAN binding protein 17##AF222747|RANBP17|64901|RAN binding protein 17##AL832980|RANBP17|64901|RAN binding protein 17##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17##AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC017291|TLX3|30012|T-cell leukemia homeobox 3##NM_021025|TLX3|30012|T-cell leukemia homeobox 3##DQ892654|TLX3|30012|T-cell leukemia homeobox 3##DQ895893|TLX3|30012|T-cell leukemia homeobox 3##DQ896085|TLX3|30012|T-cell leukemia homeobox 3##NM_001037738|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##NM_002520|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##NM_199185|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##D28343|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AK290652|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC008495|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC107754|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC012566|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC021668|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ303464|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016716|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016768|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016824|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC021983|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC014349|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC002398|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M23613|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M26697|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC020467|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC050628|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M28699|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740634|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740635|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740636|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740637|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740638|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740639|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740640|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB042278|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451236|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451361|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BT007011|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ892032|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ895223|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##EF429251|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##X16934|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)	0.169238	
chr6_cox_hap2	4756922	4757050	reg1026332.p1	6.368	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.028597	
chr8	27621436	27621589	reg1023237.p1	6.368	+	TSC_hg19_v1_chr8_+_27491466 AB007829 AB007830 NM_016240 NM_182826 BC075067 BC075068	-129934	+	BC060811 TSC_hg19_v1_chr8_+_27491395	-130123	+	AB527877 TSC_hg19_v1_chr8_-_27472317 NM_001831	-149200	-	BC006239 TSC_hg19_v1_chr8_-_27630126 BC054039 BC065295 BC110391 AK027900 AK316015 BC049197 AK311437 BC032588 AK292875 AK294848 AK001715 NM_018246	8622	-	AF306677 AF306678 TSC_hg19_v1_chr8_+_27632070 AF306675 AY882862 NM_001017420 AK124215 AF306679 AL832666 BC017933 BC034641	10487	+	TSC_hg19_v1_chr8_-_27695325 AF189722 AB027250 AK027291 AF237709 BC015191 AB027249 NM_018492	73835	-	AB007829|SCARA3|51435|scavenger receptor class A, member 3##AB007830|SCARA3|51435|scavenger receptor class A, member 3##NM_016240|SCARA3|51435|scavenger receptor class A, member 3##NM_182826|SCARA3|51435|scavenger receptor class A, member 3##BC075067|SCARA3|51435|scavenger receptor class A, member 3##BC075068|SCARA3|51435|scavenger receptor class A, member 3##BC060811|SCARA3|51435|scavenger receptor class A, member 3##NM_001831|CLU|1191|clusterin##BC006239|CCDC25|55246|coiled-coil domain containing 25##BC054039|CCDC25|55246|coiled-coil domain containing 25##BC065295|CCDC25|55246|coiled-coil domain containing 25##BC110391|CCDC25|55246|coiled-coil domain containing 25##AK027900|CCDC25|55246|coiled-coil domain containing 25##AK316015|CCDC25|55246|coiled-coil domain containing 25##BC049197|CCDC25|55246|coiled-coil domain containing 25##AK311437|CCDC25|55246|coiled-coil domain containing 25##BC032588|CCDC25|55246|coiled-coil domain containing 25##AK292875|CCDC25|55246|coiled-coil domain containing 25##AK294848|CCDC25|55246|coiled-coil domain containing 25##AK001715|CCDC25|55246|coiled-coil domain containing 25##NM_018246|CCDC25|55246|coiled-coil domain containing 25##AF306677|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF306678|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF306675|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AY882862|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##NM_001017420|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AK124215|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF306679|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AL832666|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##BC017933|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##BC034641|ESCO2|157570|establishment of cohesion 1 homolog 2 (S. cerevisiae)##AF189722|PBK|55872|PDZ binding kinase##AB027250|PBK|55872|PDZ binding kinase##AK027291|PBK|55872|PDZ binding kinase##AF237709|PBK|55872|PDZ binding kinase##BC015191|PBK|55872|PDZ binding kinase##AB027249|PBK|55872|PDZ binding kinase##NM_018492|PBK|55872|PDZ binding kinase	0.808449	CTCF.p2:26:0.808
chr11	89846845	89846947	reg1019446.p1	6.367	+	NM_001143975	-27779	+	NM_001195234	-82623	+	NM_001136486	-145225	+	NM_005467 BC038840 AK075390 TSC_hg19_v1_chr11_+_89867862 BC027594 BC088727 AJ012370 BC067793 BC096316 BC096317 BC096318 BC099646 CU691606	20975	+	CU687242 BC002339 BC072461 TSC_hg19_v1_chr11_-_89956218 AF192466 AK226099 AK225565 AK312663 AF123249 AK225365	109306	-	AK290231 NM_001144073 NM_012124	109635	-	NM_001143975|UBTFL1|642623|upstream binding transcription factor, RNA polymerase I-like 1##NM_001195234|TRIM49L2|642612|tripartite motif containing 49-like 2##NM_001136486|TRIM64|120146|tripartite motif containing 64##NM_005467|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC038840|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##AK075390|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC027594|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##AJ012370|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC067793|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC096316|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC096317|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC096318|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC099646|NAALAD2|10003|N-acetylated alpha-linked acidic dipeptidase 2##BC002339|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC072461|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF192466|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK226099|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225565|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK312663|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF123249|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225365|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1	0.99859	CTCF.p2:24:0.999
chr12	94539539	94539679	reg1026634.p1	6.367	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-468426	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-574008	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-574789	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	2895	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	313922	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	314033	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.199536	
chr16	57005238	57005414	reg1022933.p2	6.367	+	M30185 AK297699 NM_000078 TSC_hg19_v1_chr16_+_56995861 AK291586 BC025739 EU176529 CU693046 BT020064 M83573	-9489	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	-39185	+	NM_001010989 NM_001010990 NM_014685	-39579	+	TSC_hg19_v1_chr16_+_57023474 AK097030	18134	+	AK074182 NM_032206	45659	+	AF389420 EF452236 TSC_hg19_v1_chr16_+_57054697	49334	+	M30185|CETP|1071|cholesteryl ester transfer protein, plasma##AK297699|CETP|1071|cholesteryl ester transfer protein, plasma##NM_000078|CETP|1071|cholesteryl ester transfer protein, plasma##AK291586|CETP|1071|cholesteryl ester transfer protein, plasma##BC025739|CETP|1071|cholesteryl ester transfer protein, plasma##EU176529|CETP|1071|cholesteryl ester transfer protein, plasma##BT020064|CETP|1071|cholesteryl ester transfer protein, plasma##M83573|CETP|1071|cholesteryl ester transfer protein, plasma##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK097030|NLRC5|84166|NLR family, CARD domain containing 5##AK074182|NLRC5|84166|NLR family, CARD domain containing 5##NM_032206|NLRC5|84166|NLR family, CARD domain containing 5##AF389420|NLRC5|84166|NLR family, CARD domain containing 5##EF452236|NLRC5|84166|NLR family, CARD domain containing 5	0.0	
chr2	206678387	206678519	reg1023832.p1	6.367	+	TSC_hg19_v1_chr2_+_206547371 AK290934	-131092	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	-131275	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-1267734	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	272458	-	AK295987 NM_001199984	345464	-	X61100 AK098395 BC018900 BC022368 TSC_hg19_v1_chr2_-_207024145 AK300585 BC030833 AK295705 AK295966 AK298320 BC004133 NM_001199981 NM_001199982 NM_001199983 NM_005006	345719	-	AK290934|NRP2|8828|neuropilin 2##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D##AK295987|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199984|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	0.982752	CTCF.p2:-14:0.983
chr3	44087519	44087674	reg1020510.p2	6.367	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-355175	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-424083	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-424158	-	AK093476 AX748152 NM_001145030	195781	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	292034	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	292351	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.0	
chr5	6821118	6821253	reg1021647.p1	6.367	+	AK308405 NM_001171806 AK303516	-75063	+	NM_001171805 NM_006999 AF089896 BC084567	-106435	+	M32313 TSC_hg19_v1_chr5_+_6633683 BT006834 CU679027 DQ891537 DQ894726	-187511	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	575083	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	1030074	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	1047947	-	AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##M32313|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##BT006834|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##DQ891537|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##DQ894726|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3	0.95737	CTCF.p2:-26:0.944
chr8	89302102	89302212	reg1021875.p1	6.367	+	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	-415898	-	AK093121 AX747937 BC117326 BC117328 NM_173538	-1423484	+	BC150601 AF272900 NM_019098 DQ426865	-1546245	-	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	37589	-	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	1467873	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	1468127	+	BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3##AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3##NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3##AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2	0.630847	CTCF.p2:15:0.631
chr9	4985161	4985341	reg1023353.p1	6.367	+	TSC_hg19_v1_chr9_+_4985085 AK292525	-164	+	TSC_hg19_v1_chr9_+_4839769 EF553527	-145483	+	TSC_hg19_v1_chr9_+_4792995 AJ276894 EU831474 EU831561 AF067172	-192208	+	TSC_hg19_v1_chr9_+_4985271 AF005216 NM_004972 AF058925	8	+	AF135824 HQ258002 AF156094 NM_007179 BC126473 BC126475	200362	-	BC026254 AK291543 L34838 NM_002195 CU693182	246211	+	AK292525|JAK2|3717|Janus kinase 2##EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1##AJ276894|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831474|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831561|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF067172|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF005216|JAK2|3717|Janus kinase 2##NM_004972|JAK2|3717|Janus kinase 2##AF058925|JAK2|3717|Janus kinase 2##AF135824|INSL6|11172|insulin-like 6##HQ258002|INSL6|11172|insulin-like 6##AF156094|INSL6|11172|insulin-like 6##NM_007179|INSL6|11172|insulin-like 6##BC126473|INSL6|11172|insulin-like 6##BC126475|INSL6|11172|insulin-like 6##BC026254|INSL4|3641|insulin-like 4 (placenta)##AK291543|INSL4|3641|insulin-like 4 (placenta)##L34838|INSL4|3641|insulin-like 4 (placenta)##NM_002195|INSL4|3641|insulin-like 4 (placenta)	0.668857	CTCF.p2:25:0.669
chrX	78668610	78668760	reg1019211.p1	6.367	+	AK313154 NM_001171581 NM_004867	-45658	-	CR456875 CU691874 EU446983 AY359051 AB209310 BC040437 BC010511 TSC_hg19_v1_chrX_-_78622829 AK223327 AK303238 AF038953 BC034485	-45902	-	AF345567 BC104922 BC104924 NM_032553	-242217	+	AK097514 NM_001109878 NM_001109879	601569	+	BC014194 NM_016954 AY035371 AB527983 CU680824	609069	+	AK128147 NM_001170574	922317	+	AK313154|ITM2A|9452|integral membrane protein 2A##NM_001171581|ITM2A|9452|integral membrane protein 2A##NM_004867|ITM2A|9452|integral membrane protein 2A##CR456875|ITM2A|9452|integral membrane protein 2A##EU446983|ITM2A|9452|integral membrane protein 2A##AY359051|ITM2A|9452|integral membrane protein 2A##AB209310|ITM2A|9452|integral membrane protein 2A##BC040437|ITM2A|9452|integral membrane protein 2A##BC010511|ITM2A|9452|integral membrane protein 2A##AK223327|ITM2A|9452|integral membrane protein 2A##AK303238|ITM2A|9452|integral membrane protein 2A##AF038953|ITM2A|9452|integral membrane protein 2A##BC034485|ITM2A|9452|integral membrane protein 2A##AF345567|GPR174|84636|G protein-coupled receptor 174##BC104922|GPR174|84636|G protein-coupled receptor 174##BC104924|GPR174|84636|G protein-coupled receptor 174##NM_032553|GPR174|84636|G protein-coupled receptor 174##AK097514|TBX22|50945|T-box 22##NM_001109878|TBX22|50945|T-box 22##NM_001109879|TBX22|50945|T-box 22##BC014194|TBX22|50945|T-box 22##NM_016954|TBX22|50945|T-box 22##AY035371|TBX22|50945|T-box 22##AK128147|FAM46D|169966|family with sequence similarity 46, member D##NM_001170574|FAM46D|169966|family with sequence similarity 46, member D	0.491233	CTCF.p2:25:0.491
chr15	54269136	54269285	reg1021491.p1	6.366	+	AK096055 BX537884 NM_182758	-217363	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-1187016	-	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	-1298329	-	NM_001080534	35890	+	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	1219882	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	1219969	-	AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1	0.04774	
chr6	43276023	43276141	reg1023607.p1	6.366	+	TSC_hg19_v1_chr6_+_43266009 AK290806 AK309570 AK314822 BC033805 AK290796 BC017963 DQ893614 DQ896844 AF210455 AY050498	-10030	+	TSC_hg19_v1_chr6_+_43265994 NM_006672 NM_153320 AF097518	-10085	+	NM_032538 TSC_hg19_v1_chr6_+_43211227	-64854	+	AB463553 AY555741 AY555742 AY555743 AY555744 NM_206922	447	-	TSC_hg19_v1_chr6_-_43337215 BC098434 AF090114 NM_014345 BC030687	61160	-	TSC_hg19_v1_chr6_+_43395310 AK000002 NM_001198934	119231	+	AK290806|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK309570|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK314822|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC033805|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290796|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC017963|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ893614|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ896844|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF210455|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AY050498|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_006672|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_153320|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF097518|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_032538|TTBK1|84630|tau tubulin kinase 1##AY555741|CRIP3|401262|cysteine-rich protein 3##AY555742|CRIP3|401262|cysteine-rich protein 3##AY555743|CRIP3|401262|cysteine-rich protein 3##AY555744|CRIP3|401262|cysteine-rich protein 3##NM_206922|CRIP3|401262|cysteine-rich protein 3##BC098434|ZNF318|24149|zinc finger protein 318##AF090114|ZNF318|24149|zinc finger protein 318##NM_014345|ZNF318|24149|zinc finger protein 318##BC030687|ZNF318|24149|zinc finger protein 318##AK000002|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_001198934|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10	0.120374	
chr7	35075388	35075490	reg1021008.p1	6.366	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	-377520	+	AK289963 NM_133468 AK096150 BC060868	-1130297	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-1906358	+	DQ287932 NM_015283	2213	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	150353	-	TSC_hg19_v1_chr7_-_35293701 NM_001077653 NM_001166220 DQ986374	218291	-	AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##NM_001077653|TBX20|57057|T-box 20##NM_001166220|TBX20|57057|T-box 20##DQ986374|TBX20|57057|T-box 20	0.0	
chr9	71642660	71642770	reg1021345.p2	6.366	+	DQ890764 DQ893927 AB463461 BC039888 NM_002732	-13692	-	TSC_hg19_v1_chr9_-_71590760 AK057188	-51957	-	CU680482 TSC_hg19_v1_chr9_+_71395147	-247599	+	NM_000144 NM_001161706 NM_181425	7763	+	TSC_hg19_v1_chr9_+_71650693 BC048097 BC023633 CU690546	7972	+	NM_001170414 TSC_hg19_v1_chr9_+_71736198 AK295016	93486	+	DQ890764|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##DQ893927|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##BC039888|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_002732|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_000144|FXN|2395|frataxin##NM_001161706|FXN|2395|frataxin##NM_181425|FXN|2395|frataxin##BC048097|FXN|2395|frataxin##BC023633|FXN|2395|frataxin##NM_001170414|TJP2|9414|tight junction protein 2 (zona occludens 2)##AK295016|TJP2|9414|tight junction protein 2 (zona occludens 2)	0.996562	CTCF.p2:3:0.997
chr12	6793925	6794073	reg1023690.p1	6.365	+	BC013038 TSC_hg19_v1_chr12_-_6772286 AB197695 AB197696 AB197697 AB463779 EF152349 EF152350 EF152351 EF152352 BC007781 BC095434 AK313621 AF110645 AF156552 AF063594 AK293169 AK303354 NM_001127582 NM_001127583 NM_001127584 NM_001127585 NM_001127586 NM_016162	-21693	-	AK312782 TSC_hg19_v1_chr12_-_6756599	-37389	-	DQ890872 DQ894028 TSC_hg19_v1_chr12_-_6756578 AK302290 AK311572 BC033010 AB051833 NM_032489	-37435	-	TSC_hg19_v1_chr12_-_6798471 AK095734	4468	-	TSC_hg19_v1_chr12_-_6798532 NM_133476	4543	-	BC053361 AK298962 TSC_hg19_v1_chr12_-_6798677 NM_001039920 NM_001135734	4679	-	BC013038|ING4|51147|inhibitor of growth family, member 4##AB197695|ING4|51147|inhibitor of growth family, member 4##AB197696|ING4|51147|inhibitor of growth family, member 4##AB197697|ING4|51147|inhibitor of growth family, member 4##EF152349|ING4|51147|inhibitor of growth family, member 4##EF152350|ING4|51147|inhibitor of growth family, member 4##EF152351|ING4|51147|inhibitor of growth family, member 4##EF152352|ING4|51147|inhibitor of growth family, member 4##BC007781|ING4|51147|inhibitor of growth family, member 4##BC095434|ING4|51147|inhibitor of growth family, member 4##AK313621|ING4|51147|inhibitor of growth family, member 4##AF110645|ING4|51147|inhibitor of growth family, member 4##AF156552|ING4|51147|inhibitor of growth family, member 4##AF063594|ING4|51147|inhibitor of growth family, member 4##AK293169|ING4|51147|inhibitor of growth family, member 4##AK303354|ING4|51147|inhibitor of growth family, member 4##NM_001127582|ING4|51147|inhibitor of growth family, member 4##NM_001127583|ING4|51147|inhibitor of growth family, member 4##NM_001127584|ING4|51147|inhibitor of growth family, member 4##NM_001127585|ING4|51147|inhibitor of growth family, member 4##NM_001127586|ING4|51147|inhibitor of growth family, member 4##NM_016162|ING4|51147|inhibitor of growth family, member 4##AK312782|ACRBP|84519|acrosin binding protein##DQ890872|ACRBP|84519|acrosin binding protein##DQ894028|ACRBP|84519|acrosin binding protein##AK302290|ACRBP|84519|acrosin binding protein##AK311572|ACRBP|84519|acrosin binding protein##BC033010|ACRBP|84519|acrosin binding protein##AB051833|ACRBP|84519|acrosin binding protein##NM_032489|ACRBP|84519|acrosin binding protein##AK095734|ZNF384|171017|zinc finger protein 384##NM_133476|ZNF384|171017|zinc finger protein 384##BC053361|ZNF384|171017|zinc finger protein 384##AK298962|ZNF384|171017|zinc finger protein 384##NM_001039920|ZNF384|171017|zinc finger protein 384##NM_001135734|ZNF384|171017|zinc finger protein 384	0.647986	CTCF.p2:8:0.648
chr14	107175252	107175395	reg1024905.p1	6.365	+	M87789 L29121 BC069016 L08086 AK123800 BC025314 BC026038 AK131045 AK126133 AK130642 TSC_hg19_v1_chr14_-_107170426 AK097360 AK097364 AK128394 AK307688 BC016381 AK096985 AK097305 AK097356 AK123070 AK129512 AK129622 AK129777 AK130786 AK131065 BC070333 AK097361 AK097363 AK058027 AK129809	-4908	-	AY179836 AY179838 AY179841 AY179844 AY179846 AY179847 AY179848 AY179850 AY179854 AY179855 AY179856 AY179858 AY179860 AY003797 DQ454801 EF583677 EU099154 EU099192 AY003810 DQ454853 AY003779 DQ454620 DQ523910 GU552683 AY003802 AY003865 DQ454802 DQ454808 DQ454937 GU552691 GU552774 HM773974 FJ873961 EF441761 DQ454821 AY996332 FJ840044 FJ840053 FJ840143 FJ840193 FJ840194 FJ840196 FJ840204 FJ840239 FJ873866 FJ873869 FJ873895 FJ873936 FJ874043 GQ232929 HM116184 EF583683 EF175392 EU099153 GQ232967 GU358675 EF583681 EU099116 GU358674 JF810254 EF091907 EF175405 EU667599 EF091906 EF091908 EF091909 EF091910 EF175388 EF175390 EF175395 EF175406 EF175412 EF175417 EF175418 EF175420 EF175428 EF407848 EF441755 EU099106 EU350411 EU350412 EU433866 EU433872 EU433873 EU433879 EU667594 EU667595 EU667596 EU667597 EU667598 EU814958 EU814959 EU814960 EU814963 EU814966 FJ694873 FJ694874 GQ232838 GQ232965 GU358670 GU358676 GU358678 GU358682 JF810255 JF810274 AF103216 EF175425 EF583662 EF583663 EF583664 EF583665 EF583667 EF583673 EF583674 EF583675 EF583682 EU350410 M35478 EF407834 EF566907 EF407828 EF407830 EF583660 DQ100847 AY998726 AF209884 AJ007325 EF473862 EU099204 U86786 U86795 U86797 AF308545 AF308549 AF308553 AF308554 AF308559 AF308560 AF308561 EU090245 GQ903485 GQ903489 GQ903492 EU099120 GQ903503 AJ239384 EU099100 EU099208 Z80841 AF103052 AF103307 EU099086 EU099105 EU099142 EU099250 EU099176 EU099293 HM774304 AY515008 EU099141 EU099212 JN110763 JN110845 JN110914 JN111163 L04334 L04335 L04344 FJ385405 FJ385410 FJ385424 FJ385430 FJ385431 HM774065 HM774083 HM774091 HM774102 HM774365 HM774646 HM774653 HM774656 HM774681 HM774757 HM774769 HM774771 HM774786 HM774863 HM774965 HM775047 AF103339 AY515006 DQ523992 EU099090 EU099092 EU099115 EU099162 EU099179 EU099210 EU099218 EU099282 DQ097895 EF624069 EF624074 EF624075 EF624077 EF624128 EF624129 EF624130 EF624131 EF624138 EF624140 EF624141 EF624143 EF624174 EF624175 EF624176 EF624177 EF624179 EF624180 EF624182 EF624183 EF624184 EF624185 EF624186 EF624187 EF624188 EF624189 EF624190 EF624191 EF624192 EF624193 EU099060 EU099066 EU099128 EU099129 EU099145 EU099158 EU099160 EU099161 EU099165 EU099177 EU099178 EU099180 EU099247 EU146320 EU146330 EU146331 EU146336 EU146348 EU146349 EU146350 EU146351 EU146352 EU146353 EU146354 EU146355 EU146356 EU146357 EU146359 EU146383 EU146385 EU146386 M98324 AY393263 AY393515 DQ524120 EU090241 EU099081 EU099095 EU099099 EU099103 EU099111 EU099121 EU099135 EU099136 EU099164 EU099170 EU099174 EU099189 EU099205 EU099207 EU099209 EU099220 AF306353 AJ132852 AM259138 L12098 AF035025 AY392856 AY392858 AY393000 AY393010 AY393106 AY393123 AY393128 AY393133 AY393135 AY393137 AY393138 AY393233 AY393338 AY393342 AY393350 AY393373 AY393495 AY393496 AY393501 AY393503 AY393504 AY393508 AY393513 AY393514 AY393516 AY393517 AY393518 AY393519 AY393520 AY393522 AY393523 AY393525 AY393528 AY393532 AY393535 AY393538 AY393539 AY393540 AY393541 AY393542 AY393543 AY393544 AY393545 AY393546 AY393604 AY393611 AY393682 DQ100913 EU099069 EU099072 EU099083 EU099117 EU099138 EU099167 EU099168 EU099171 EU099175 EU099188 EU099198 EU099201 EU099202 EU099211 EU099219 EU099236 HM994945 AY574947 AY093586 AY093587 DQ100805 DQ100924 JN158773 AY093585 AF035785 AF098366 AY781822 DQ100688 DQ523989 HM995306 U00502 DQ100709 DQ100908 DQ523957 DQ524013 DQ524031 DQ524041 DQ524127 HM994992 HM994994 HM994997 HM994998 HM995013 HM995114 HM995174 HM995178 HM995180 HM995227 HM995241 HM995248 HM995283 HM995304 HM995307 HM995375 HM995447 HM995450 HM995512 HM995517 HM995520 HM995558 HM995678 HM995679 HM995680 HM995681 HM995682 HM995683 HM995684 HM995685 HM995744 HM996065 HM996269 HM996387 AF004321 AB063837 AB063906 AB063914 AB067012 AB067013 AB067018 AB067022 AB067235 AB363092 AF099200 AF174076 AY781868 AY866799 AY941859 DQ065663 DQ065677 DQ065701 DQ840709 DQ926327 EF178030 FJ195540 FJ385306 FJ385381 GQ856069 GQ903493 GQ903497 GQ903502 GQ903514 Z92894 AB027437 AB063666 AB063701 AB063715 AB063720 AB063763 AB063768 AB063778 AB063780 AB063785 AB063831 AB063902 AB063903 AB063921 AB066830 AB066835 AB066837 AB066840 AB066841 AB066842 AB066843 AB066928 AB066936 AB066939 AB066942 AB066944 AB066948 AB066949 AB066953 AB067158 AB067170 AB067305 AB067309 AB067333 AB067383 AB363078 AB363086 AB363094 AB363097 AB373608 AF021950 AF021951 AF021952 AF021970 AF021992 AF035784 AF062098 AF062127 AF062189 AF062216 AF062283 AF115114 AF115115 AF115116 AF115118 AF115119 AF174042 AF174065 AF174069 AF174073 AF174096 AF174109 AF174126 AF193848 AF217789 AF408721 AF460964 AF460965 AJ239346 AJ239357 AJ239365 AJ239372 AJ239376 AJ389170 AJ389172 AJ389179 AJ389181 AJ413995 AJ414000 AJ414001 AJ414002 AJ414004 AJ414008 AJ414009 AJ414010 AJ414015 AJ414017 AJ414020 AJ414021 AJ414023 AJ414027 AJ416562 AJ555258 AJ555262 AJ555275 AM040567 AY033246 AY055485 AY059634 AY281328 AY281329 AY466503 AY485361 AY553640 AY557623 AY557624 AY557625 AY557626 AY557627 AY561708 AY577304 AY781812 AY927666 AY941846 AY941940 D16837 DQ100681 DQ100723 DQ100733 DQ100777 DQ100808 DQ100811 DQ100820 DQ100839 DQ100902 DQ100906 DQ100912 DQ100952 DQ212523 DQ490739 DQ926531 EF555585 EF624068 EF624070 EF624071 EF624072 EF624073 EF624078 EF624079 EF624132 EF624136 EF624178 EF624181 EF624194 EF624195 EU202446 EU202448 EU835547 EU835554 FJ039781 FJ039784 FJ385379 GQ903484 GQ903486 GQ903487 GQ903490 GQ903491 GQ903495 GQ903496 GQ903498 GQ903500 GQ903501 GQ903504 GQ903507 GQ903509 GQ903511 GU570264 GU570271 GU570274 HM152493 HM152496 HM152502 HM152504 HM152527 HQ378401 HQ392874 HQ689778 HQ689781 JN158782 JN159449 JN159454 L14454 L23519 S73955 U00518 U00550 U00583 U71105 U85240 U89903 X64237 X67903 Z18841 Z34906 Z34908 Z34957 Z34959 Z34960 Z34961 Z34962 Z34963 AY927663 JN158517 DQ535261 DQ535284 DQ535416 DQ535445 DQ535451 DQ535460 EF177997 EF178006 EF178014 GU570268 Z35123 M18516 AF062105 AF062117 AF062156 AF062161 AF062175 AF062193 AF062198 AF062208 AF174026 AY172957 L06923 M62723 X65889 Z14214 Z47222 Z47224 Z47227 Z47233 Z47244 Z47245 Z47246 Z47247 Z47248 Z47249 Z47250 Z47251 Z47252 Z47253 Z47254 Z47255 Z47256 Z47257 Z47258 Z47259 Z47260 Z47261 Z47262 Z47263 Z47264 Z47265 Z47266 Z47267 Z47268 Z47269 Z47270 Z47271 Z47272 Z47273 Z80837 Z80853 CU688244 L23561 M24669 M24670 TSC_hg19_v1_chr14_-_107170387 BC062336	-5088	-	GQ232991 EU814957 AY003867 GQ233006 AY003724 AY003757 FJ840009 GU552709 AY003791 FJ840366 JF810271 FJ840139 FJ874031 AF017464 HM774748 HM775002 HQ704029 DQ524134 DQ840815 DQ840856 AY530312 AY941926 AY986399 DQ100849 AB067106 AB363089 DQ535377 U00563 U64502 AY392909 AY393069 AY393070 AF062111 AF062168 X81739 X81750 Z14221 TSC_hg19_v1_chr14_-_107131555 AK097017 AK128476 AK130433	-43934	-	FJ840101 FJ840103 FJ840105 FJ840106 FJ840110 FJ840116 FJ840119 FJ840153 FJ840184 FJ840185 FJ840188 FJ840189 FJ840190 FJ840192 FJ840197 FJ840199 FJ840203 FJ840206 FJ840207 FJ840208 FJ840209 FJ873863 FJ873875 FJ873894 FJ873921 FJ873929 FJ873938 FJ873947 FJ873950 FJ873952 FJ873965 FJ873977 FJ873996 FJ873997 FJ873999 FJ874008 FJ874014 FJ874026 FJ874040 FJ874044 FJ874061 FJ874068 FJ874078 FJ874079 FJ874080 HM116116 HM116121 HM116146 HM116172 HM116181 HM116193 HM116196 HM116197 HM116201 HM116225 GQ232804 GQ232899 AY003747 AY392896 AY393031 AY393032 AY393052 AY393293 AY393389 AY393434 AY393562 AF103042 AF459629 HM774620 HM774632 AM183987 AM279526 AY312400 EF177989 DQ926546 AJ389183 DQ100956 DQ926096 U00507 AB066845 AB066846 AB066847 AB066848 AB066849 AB066853 AB066854 AB066855 AB066856 AB066860 AB066863 AB066867 AB066872 AB066875 AB066876 AB067169 AB067183 AB067187 AB067188 AB067191 AB067197 AB067198 AB067200 AB067201 AB067203 AB067204 AB067205 AB067206 AB067207 AB067208 AB067209 AB067210 AB067211 AB067212 AB067213 AB067215 AB067216 AB067217 AB067219 AB067220 AB067227 AB067230 AF062247 AF174045 AF174063 AF174117 AF442758 AJ239338 AJ239347 AJ389184 AY781820 AY941845 DQ926224 DQ926451 FJ385297 GU570281 GU570282 HQ378332 U00575 U77371 X79160 Z80836 DQ535270 DQ535432 L28050 M34027 AF062153 AJ131058 AY190826 L21960 TSC_hg19_v1_chr14_-_107179280 AK097955	3867	-	JF810265 DQ454799 FJ840007 FJ840015 DQ454561 DQ454955 DQ454612 DQ454663 DQ454685 FJ840092 FJ840295 FJ873837 AJ008218 JF810272 JF810273 AY003862 AJ132562 Y08732 AF103327 EU099062 EU620029 GQ504979 HQ392897 AF103116 AF103087 AF103100 HM774925 JN110942 HM774229 FJ385350 GQ504960 HM774112 HM774402 HM774448 HM774462 HM774524 HM774766 HM775010 AF103135 HM774927 HM774932 HM774189 U00529 Y14940 AF103057 AF103351 EU146338 L03141 L03153 AF029328 AF485459 DQ431489 L03143 L03173 L03177 AF035801 AY423195 AY423198 AY423206 DQ431488 DQ431492 HM995020 DQ431490 GU570297 HM152513 HM994969 HM994972 HM994977 HM994978 HM994981 HM994982 HM994989 HM995522 HM995532 HM996141 HM996526 DQ187603 DQ187629 DQ322887 DQ322888 DQ322889 DQ322890 DQ322960 DQ840663 DQ840674 DQ840675 DQ840677 DQ840678 DQ840680 DQ840681 DQ840682 DQ840683 DQ840687 DQ840758 DQ840769 DQ840770 DQ840771 DQ840773 DQ840781 DQ840844 DQ840857 DQ840859 DQ840860 DQ840863 DQ840910 DQ840917 DQ840918 AF021973 AF048774 AF115122 AF151702 AF174111 AJ238039 AJ579199 AJ579279 AY866726 AY866767 DQ100754 DQ100773 DQ100787 DQ100849 DQ100977 DQ840729 DQ926055 DQ926218 DQ926255 DQ926308 EF177956 EF178021 GQ267831 U96395 X99352 Y17142 AB063699 AB063849 AB063916 AB067258 AB363156 AF021945 AF129753 AF471200 AF471528 AF471540 AF471541 AF471542 AF471546 AJ300788 AJ389185 AJ556647 AJ556667 AJ579161 AY554174 AY554177 AY554178 AY573190 AY640527 AY640562 AY846273 AY971106 D83679 DQ065693 DQ535269 DQ535318 DQ535335 DQ535453 DQ535464 DQ535482 DQ926153 DQ926492 EF178117 EF178127 EF178131 EU835555 FJ195515 FJ492899 FN563769 GU570345 GU570350 HQ378386 JF806284 U97244 X99353 L33033 Z11950 BC033178 TSC_hg19_v1_chr14_-_107199472	23977	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	35978	-	M87789|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC069016|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123800|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC025314|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC026038|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126133|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK130642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097360|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097364|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128394|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016381|IGHM|3507|immunoglobulin heavy constant mu##AK096985|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097305|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097356|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123070|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129512|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129622|IGHM|3507|immunoglobulin heavy constant mu##AK129777|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK131065|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC070333|IGHV1-69|28461|immunoglobulin heavy variable 1-69##AK097361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097363|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058027|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129809|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF035025|IGHV1-69|28461|immunoglobulin heavy variable 1-69##BC062336|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097017|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130433|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097955|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC033178|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.96535	CTCF.p2:28:0.965
chr19	5773866	5773962	reg1021407.p1	6.365	+	AK128088 NM_152784 BC043005	-53218	+	TSC_hg19_v1_chr19_-_5720158 AK096626 NM_004793	-53747	-	TSC_hg19_v1_chr19_-_5720155 AK096433 AK127867 AK298531 AK309720	-53758	-	NM_001134316	10861	-	TSC_hg19_v1_chr19_-_5791173 AL365411 CU678764 EU832641 EU832718 AK023958 AK225840	17129	-	TSC_hg19_v1_chr19_-_5791185 BC009973	17271	-	AK128088|TMEM146|257062|transmembrane protein 146##NM_152784|TMEM146|257062|transmembrane protein 146##BC043005|TMEM146|257062|transmembrane protein 146##AK096626|LONP1|9361|lon peptidase 1, mitochondrial##NM_004793|LONP1|9361|lon peptidase 1, mitochondrial##AK096433|LONP1|9361|lon peptidase 1, mitochondrial##AK127867|LONP1|9361|lon peptidase 1, mitochondrial##AK298531|LONP1|9361|lon peptidase 1, mitochondrial##AK309720|LONP1|9361|lon peptidase 1, mitochondrial##NM_001134316|PRR22|163154|proline rich 22##AL365411|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##EU832641|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##EU832718|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK023958|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK225840|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##BC009973|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)	0.724856	CTCF.p2:34:0.725
chr1	120092395	120092495	reg1022780.p2	6.364	+	NM_000862 S45679 AK291556 BC031999 M35493 X53321 M27137 DQ891161 DQ894342 CU689258 X55997	-42483	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	-134684	+	NM_001166120	-134892	+	NM_001080470	97944	-	NM_006623 AK315360 BC011262 TSC_hg19_v1_chr1_+_120254558 AK309662 AK310132 AF171237 BC000303 BC001349 BC023235 DQ892073 EU176546 AB528378 CR456795	162086	+	CR456850 BC044217 X83618 AK301594 AK313590 TSC_hg19_v1_chr1_-_120311529 AK302276 AK303777 NM_001166107 NM_005518	219065	-	NM_000862|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##S45679|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##AK291556|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##BC031999|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M35493|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X53321|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M27137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ891161|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ894342|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X55997|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_001080470|ZNF697|90874|zinc finger protein 697##NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase##AK315360|PHGDH|26227|phosphoglycerate dehydrogenase##BC011262|PHGDH|26227|phosphoglycerate dehydrogenase##AK309662|PHGDH|26227|phosphoglycerate dehydrogenase##AK310132|PHGDH|26227|phosphoglycerate dehydrogenase##AF171237|PHGDH|26227|phosphoglycerate dehydrogenase##BC000303|PHGDH|26227|phosphoglycerate dehydrogenase##BC001349|PHGDH|26227|phosphoglycerate dehydrogenase##BC023235|PHGDH|26227|phosphoglycerate dehydrogenase##DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase##EU176546|PHGDH|26227|phosphoglycerate dehydrogenase##CR456795|PHGDH|26227|phosphoglycerate dehydrogenase##CR456850|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##BC044217|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##X83618|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK301594|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK313590|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK302276|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##AK303777|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_001166107|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)##NM_005518|HMGCS2|3158|3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)	0.288377	CTCF.p2:-3:0.288
chr6	132778122	132778238	reg1021277.p2	6.364	+	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	-55564	-	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	-505766	-	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-648919	+	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	56070	-	BC069083 NM_175057 AY183469	81247	+	AB529265 AY183468 BC069166 NM_053278	95650	+	DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7##BC069083|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##NM_175057|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183469|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183468|TAAR8|83551|trace amine associated receptor 8##BC069166|TAAR8|83551|trace amine associated receptor 8##NM_053278|TAAR8|83551|trace amine associated receptor 8	0.0	
chr12	101135033	101135138	reg1020644.p2	6.363	+	TSC_hg19_v1_chr12_+_100967484 BC043366 NM_174942	-167596	+	TSC_hg19_v1_chr12_+_100967438 AK315189	-167654	+	AF478445 AF478446 NM_001206992 NM_001206993 AK296612 BX571749 AB463943 BC071778 AK296647	-237916	+	NM_178826 TSC_hg19_v1_chr12_+_101188522 AK091591 AX747079 AK316105 AK293810	53469	+	AK313788 AF536216 AY081220 NM_145913	468914	-	TSC_hg19_v1_chr12_+_101673904 NM_014503 AK307934 AJ006778	538820	+	BC043366|GAS2L3|283431|growth arrest-specific 2 like 3##NM_174942|GAS2L3|283431|growth arrest-specific 2 like 3##AK315189|GAS2L3|283431|growth arrest-specific 2 like 3##AF478445|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AF478446|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206992|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206993|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AK296612|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BX571749|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC071778|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##AK296647|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_178826|ANO4|121601|anoctamin 4##AK091591|ANO4|121601|anoctamin 4##AK316105|ANO4|121601|anoctamin 4##AK293810|ANO4|121601|anoctamin 4##AK313788|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AF536216|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AY081220|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_145913|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_014503|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK307934|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AJ006778|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)	0.99651	CTCF.p2:0:0.997
chr1	68315878	68316008	reg1021719.p1	6.363	+	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	-16833	-	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	-17955	+	TSC_hg19_v1_chr1_+_68151094 AB463698 AM393439 DQ893229 DQ896558	-164809	+	BC005362 U96750 NM_004675	200442	-	TSC_hg19_v1_chr1_-_68698207 BC137109 BC137113 BC110826 AB097018 AK074984 AK301613 BX648748 BX538320 NM_001002292 NM_001193334 AK074583 AK309779 DQ323735 AY359035 NM_024911	382214	-	AK289925 BC075035 BC075036 NM_000329 U18991	599693	-	AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK124028|LOC100289178|100289178|uncharacterized LOC100289178##AM393439|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ893229|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ896558|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##BC137109|WLS|79971|wntless homolog (Drosophila)##BC137113|WLS|79971|wntless homolog (Drosophila)##BC110826|WLS|79971|wntless homolog (Drosophila)##AB097018|WLS|79971|wntless homolog (Drosophila)##AK074984|WLS|79971|wntless homolog (Drosophila)##AK301613|WLS|79971|wntless homolog (Drosophila)##BX648748|WLS|79971|wntless homolog (Drosophila)##BX538320|WLS|79971|wntless homolog (Drosophila)##NM_001002292|WLS|79971|wntless homolog (Drosophila)##NM_001193334|WLS|79971|wntless homolog (Drosophila)##AK074583|WLS|79971|wntless homolog (Drosophila)##AK309779|WLS|79971|wntless homolog (Drosophila)##DQ323735|WLS|79971|wntless homolog (Drosophila)##AY359035|WLS|79971|wntless homolog (Drosophila)##NM_024911|WLS|79971|wntless homolog (Drosophila)##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	0.999244	CTCF.p2:-22:0.999
chr6	46823834	46823975	reg1027173.p1	6.363	+	NM_005588 AK225212 TSC_hg19_v1_chr6_+_46761125 AK315246 AK315840 BC131714 AF478685 AK290282 M82962 BC143649 BC143650 BC143651	-62793	+	NM_001162435 AK304342	-109229	+	BC038452 NM_001168357	-120475	-	TSC_hg19_v1_chr6_-_46825943 BC036002	2044	-	AL832125 AB018301 AK289503 AK092043 AX747330 NM_001098518	65762	-	AY498875 AL050295 NM_015234	98699	-	NM_005588|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AK225212|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AK315246|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AK315840|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC131714|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AF478685|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##AK290282|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##M82962|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC143649|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC143650|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##BC143651|MEP1A|4224|meprin A, alpha (PABA peptide hydrolase)##NM_001162435|LOC100287718|100287718|uncharacterized LOC100287718##AK304342|LOC100287718|100287718|uncharacterized LOC100287718##BC038452|PLA2G7|7941|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)##NM_001168357|PLA2G7|7941|phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)##BC036002|GPR116|221395|G protein-coupled receptor 116##AL832125|GPR116|221395|G protein-coupled receptor 116##AB018301|GPR116|221395|G protein-coupled receptor 116##AK289503|GPR116|221395|G protein-coupled receptor 116##AK092043|GPR116|221395|G protein-coupled receptor 116##NM_001098518|GPR116|221395|G protein-coupled receptor 116##AY498875|GPR116|221395|G protein-coupled receptor 116##AL050295|GPR116|221395|G protein-coupled receptor 116##NM_015234|GPR116|221395|G protein-coupled receptor 116	0.991931	CTCF.p2:-19:0.992
chr17	36010578	36010668	reg1021941.p1	6.362	+	TSC_hg19_v1_chr17_-_36003470 AF077033 AK001652 AK093661 AX748248 BC041785 NM_007010	-7146	-	TSC_hg19_v1_chr17_-_36003446 BC006489 AB208938 CU692030	-7182	-	TSC_hg19_v1_chr17_-_35969418 AB462949 BC117313 BC143452 BC143476 BC143478 BC084536 BC090930 AF169548 AK302821 NM_001163544 NM_001163545 NM_001163546 NM_001163547 NM_007247 NM_080550 NM_198882	-41173	-	AB528419 BT007126 CR536572 DQ891528 EU176615 TSC_hg19_v1_chr17_-_36104898	94263	-	TSC_hg19_v1_chr17_-_36105051 HM116553 HM116554 HM116555 HM116556 AK290131 AK296633 AK298393 BC017714 X58840 NM_000458 NM_001165923	94428	-	NM_001123391 NM_032258 AK313329 AK302064 BC078140 BC071680 AK301823 AL136860 BC047739	273370	+	AF077033|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK001652|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK093661|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC041785|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_007010|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC006489|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AB208938|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC117313|SYNRG|11276|synergin, gamma##BC143452|SYNRG|11276|synergin, gamma##BC143476|SYNRG|11276|synergin, gamma##BC143478|SYNRG|11276|synergin, gamma##BC084536|SYNRG|11276|synergin, gamma##BC090930|SYNRG|11276|synergin, gamma##AF169548|SYNRG|11276|synergin, gamma##AK302821|SYNRG|11276|synergin, gamma##NM_001163544|SYNRG|11276|synergin, gamma##NM_001163545|SYNRG|11276|synergin, gamma##NM_001163546|SYNRG|11276|synergin, gamma##NM_001163547|SYNRG|11276|synergin, gamma##NM_007247|SYNRG|11276|synergin, gamma##NM_080550|SYNRG|11276|synergin, gamma##NM_198882|SYNRG|11276|synergin, gamma##BT007126|HNF1B|6928|HNF1 homeobox B##CR536572|HNF1B|6928|HNF1 homeobox B##DQ891528|HNF1B|6928|HNF1 homeobox B##EU176615|HNF1B|6928|HNF1 homeobox B##HM116553|HNF1B|6928|HNF1 homeobox B##HM116554|HNF1B|6928|HNF1 homeobox B##HM116555|HNF1B|6928|HNF1 homeobox B##HM116556|HNF1B|6928|HNF1 homeobox B##AK290131|HNF1B|6928|HNF1 homeobox B##AK296633|HNF1B|6928|HNF1 homeobox B##AK298393|HNF1B|6928|HNF1 homeobox B##BC017714|HNF1B|6928|HNF1 homeobox B##X58840|HNF1B|6928|HNF1 homeobox B##NM_000458|HNF1B|6928|HNF1 homeobox B##NM_001165923|HNF1B|6928|HNF1 homeobox B##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##AK313329|TBC1D3|729873|TBC1 domain family, member 3##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3	0.113096	
chr19	8181423	8181552	reg1024467.p1	6.362	+	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	-63540	+	AK292662 NM_001201359 NM_005624	-63842	+	TSC_hg19_v1_chr19_-_8070526 U38175 BC003376 NM_001419	-110962	-	AB384635 AB053450 BC153882 NM_032447	30888	-	TSC_hg19_v1_chr19_+_8274253 NM_024552 AK222621 AK225394 AK022151 BC063621	92761	+	TSC_hg19_v1_chr19_-_8373195 CR457174 EU831651 BC036814 BC007083 AY358420 AL365455 BC000668 AK222623 AK315656 AL136652 AK058014 AF161254 NM_001165895 NM_016579	191722	-	BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25##AK292662|CCL25|6370|chemokine (C-C motif) ligand 25##NM_001201359|CCL25|6370|chemokine (C-C motif) ligand 25##NM_005624|CCL25|6370|chemokine (C-C motif) ligand 25##U38175|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##BC003376|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##NM_001419|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##AB053450|FBN3|84467|fibrillin 3##BC153882|FBN3|84467|fibrillin 3##NM_032447|FBN3|84467|fibrillin 3##NM_024552|CERS4|79603|ceramide synthase 4##AK222621|CERS4|79603|ceramide synthase 4##AK225394|CERS4|79603|ceramide synthase 4##AK022151|CERS4|79603|ceramide synthase 4##BC063621|CERS4|79603|ceramide synthase 4##CR457174|CD320|51293|CD320 molecule##EU831651|CD320|51293|CD320 molecule##BC036814|CD320|51293|CD320 molecule##BC007083|CD320|51293|CD320 molecule##AY358420|CD320|51293|CD320 molecule##AL365455|CD320|51293|CD320 molecule##BC000668|CD320|51293|CD320 molecule##AK222623|CD320|51293|CD320 molecule##AK315656|CD320|51293|CD320 molecule##AL136652|CD320|51293|CD320 molecule##AK058014|CD320|51293|CD320 molecule##AF161254|CD320|51293|CD320 molecule##NM_001165895|CD320|51293|CD320 molecule##NM_016579|CD320|51293|CD320 molecule	0.894063	CTCF.p2:-3:0.894
chr20	22955118	22955231	reg1021619.p1	6.362	+	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	-389072	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	-390099	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	-390258	-	TSC_hg19_v1_chr20_+_23015949 BC117270 BC117272 NM_001052 BC069063	60860	+	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	75064	-	TSC_hg19_v1_chr20_-_23062805 AK056764	107638	-	AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##BC117270|SSTR4|6754|somatostatin receptor 4##BC117272|SSTR4|6754|somatostatin receptor 4##NM_001052|SSTR4|6754|somatostatin receptor 4##BC069063|SSTR4|6754|somatostatin receptor 4##BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##AK056764|CD93|22918|CD93 molecule	1.167011	CTCF.p2:5:0.260	CTCF.p2:100:0.907
chr2	187368937	187369117	reg1021487.p2	6.362	+	TSC_hg19_v1_chr2_+_187351051 BC021102 EU176353 AB587394 CU676824	-17957	+	TSC_hg19_v1_chr2_+_187351010 BC012336 AF161421 AF109366	-18017	+	TSC_hg19_v1_chr2_+_187350986 AF220184 NM_018471 AK298615 AK001901 AK297658 AF289586	-18097	+	TSC_hg19_v1_chr2_+_187454760 AK302550 AK309711 NM_001145000 NM_002210 AB209894 BC126231 BC136442 BC144100	85803	+	TSC_hg19_v1_chr2_+_187455042 EF560727 M14648 AB527165	86000	+	AK302990 NM_001144999	95904	+	BC021102|ZC3H15|55854|zinc finger CCCH-type containing 15##EU176353|ZC3H15|55854|zinc finger CCCH-type containing 15##BC012336|ZC3H15|55854|zinc finger CCCH-type containing 15##AF161421|ZC3H15|55854|zinc finger CCCH-type containing 15##AF109366|ZC3H15|55854|zinc finger CCCH-type containing 15##AF220184|ZC3H15|55854|zinc finger CCCH-type containing 15##NM_018471|ZC3H15|55854|zinc finger CCCH-type containing 15##AK298615|ZC3H15|55854|zinc finger CCCH-type containing 15##AK001901|ZC3H15|55854|zinc finger CCCH-type containing 15##AK297658|ZC3H15|55854|zinc finger CCCH-type containing 15##AF289586|ZC3H15|55854|zinc finger CCCH-type containing 15##AK302550|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##AK309711|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##NM_001145000|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##NM_002210|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##AB209894|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##BC126231|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##BC136442|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##BC144100|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##EF560727|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##M14648|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##AK302990|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##NM_001144999|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)	0.0	
chr22	39712545	39712654	reg1019238.p2	6.362	+	NM_002608 X02811 TSC_hg19_v1_chr22_-_39640988 M12783	-71592	-	CR541807 CU013138 CU013426 AB590092 TSC_hg19_v1_chr22_-_39639984 CR456538 X02744	-72574	-	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	-75690	-	BC014017 BC013674 BC013861 BC015032 BC015767 BC088373 BC063662 BC071666 CR456566 BC006483 BC012146 BC012786 TSC_hg19_v1_chr22_-_39715629 AK092695 AK297711 AK315693 AX747675 BC008492 BC107711 D28415 NM_000967 NM_001033853	3040	-	TSC_hg19_v1_chr22_+_39745981 NM_004711 NM_145731 BC000731 AK295863 CR456590 AK289507 AB209372 CU013190 CU013478 AB587338 AJ002304 AJ002305 BT007135 CU674372	33306	+	AJ002303 NM_145738	47575	+	NM_002608|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02811|PDGFB|5155|platelet-derived growth factor beta polypeptide##M12783|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR541807|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013138|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013426|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR456538|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02744|PDGFB|5155|platelet-derived growth factor beta polypeptide##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide##BC014017|RPL3|6122|ribosomal protein L3##BC013674|RPL3|6122|ribosomal protein L3##BC013861|RPL3|6122|ribosomal protein L3##BC015032|RPL3|6122|ribosomal protein L3##BC015767|RPL3|6122|ribosomal protein L3##BC088373|RPL3|6122|ribosomal protein L3##BC063662|RPL3|6122|ribosomal protein L3##BC071666|RPL3|6122|ribosomal protein L3##CR456566|RPL3|6122|ribosomal protein L3##BC006483|RPL3|6122|ribosomal protein L3##BC012146|RPL3|6122|ribosomal protein L3##BC012786|RPL3|6122|ribosomal protein L3##AK092695|RPL3|6122|ribosomal protein L3##AK297711|RPL3|6122|ribosomal protein L3##AK315693|RPL3|6122|ribosomal protein L3##BC008492|RPL3|6122|ribosomal protein L3##BC107711|RPL3|6122|ribosomal protein L3##NM_000967|RPL3|6122|ribosomal protein L3##NM_001033853|RPL3|6122|ribosomal protein L3##NM_004711|SYNGR1|9145|synaptogyrin 1##NM_145731|SYNGR1|9145|synaptogyrin 1##BC000731|SYNGR1|9145|synaptogyrin 1##AK295863|SYNGR1|9145|synaptogyrin 1##CR456590|SYNGR1|9145|synaptogyrin 1##AK289507|SYNGR1|9145|synaptogyrin 1##CU013190|SYNGR1|9145|synaptogyrin 1##CU013478|SYNGR1|9145|synaptogyrin 1##AJ002304|SYNGR1|9145|synaptogyrin 1##AJ002305|SYNGR1|9145|synaptogyrin 1##BT007135|SYNGR1|9145|synaptogyrin 1##AJ002303|SYNGR1|9145|synaptogyrin 1##NM_145738|SYNGR1|9145|synaptogyrin 1	0.999823	CTCF.p2:0:1.000
chr3	128564861	128564967	reg1013885.p1	6.362	+	TSC_hg19_v1_chr3_+_128532268 AF119891	-32579	+	TSC_hg19_v1_chr3_+_128445036 AK298344	-119877	+	TSC_hg19_v1_chr3_+_128445035 AK000826 AK308934 BC008721	-119880	+	NM_014049 TSC_hg19_v1_chr3_+_128598429	33467	+	TSC_hg19_v1_chr3_+_128598453 BC007970	33534	+	AK130311 TSC_hg19_v1_chr3_+_128598469 AK297952 AK310644	33550	+	AK298344|RAB7A|7879|RAB7A, member RAS oncogene family##AK000826|RAB7A|7879|RAB7A, member RAS oncogene family##AK308934|RAB7A|7879|RAB7A, member RAS oncogene family##BC008721|RAB7A|7879|RAB7A, member RAS oncogene family##NM_014049|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##BC007970|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK130311|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK297952|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK310644|ACAD9|28976|acyl-CoA dehydrogenase family, member 9	0.994248	CTCF.p2:-6:0.994
chr7	104976548	104976670	reg1024248.p1	6.362	+	BC035214 TSC_hg19_v1_chr7_-_104909496 U88666 NM_182691	-67126	-	TSC_hg19_v1_chr7_+_104752313 AY222296 AY438698	-224231	+	TSC_hg19_v1_chr7_+_104681423 AY157990	-295195	+	TSC_hg19_v1_chr7_-_105029265 AB489157	52656	-	TSC_hg19_v1_chr7_-_105029346 NM_182692	52733	-	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	186052	-	BC035214|SRPK2|6733|SRSF protein kinase 2##U88666|SRPK2|6733|SRSF protein kinase 2##NM_182691|SRPK2|6733|SRSF protein kinase 2##AY222296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY438698|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY157990|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##NM_182692|SRPK2|6733|SRSF protein kinase 2##BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	0.996338	CTCF.p2:-12:0.996
chr8	64078339	64078468	reg1025466.p1	6.362	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-79776	-	NM_003878	-126794	-	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	-127005	-	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	2741	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	2797	+	NM_152414 AK293979	1414455	+	U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_003878|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22	0.0	
chr9	122724209	122724299	reg1021856.p1	6.362	+	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	-592596	-	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-2257567	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	-2257640	+	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	618099	-	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	752463	-	AF176698 TSC_hg19_v1_chr9_-_123555558	831291	-	BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9##AF176698|FBXW2|26190|F-box and WD repeat domain containing 2	0.95565	CTCF.p2:2:0.956
chr13	42033149	42033268	reg1022276.p2	6.361	+	TSC_hg19_v1_chr13_+_42031690 BC038706 AF036549	-1508	+	TSC_hg19_v1_chr13_+_42031685 BC066334	-1525	+	TSC_hg19_v1_chr13_+_42031539 NM_014059	-1657	+	TSC_hg19_v1_chr13_-_42535066 AK095155	501872	-	TSC_hg19_v1_chr13_-_42535247 AB590583 BC131802 BC053674 NM_001009814 NM_015058	501981	-	AK289546 NM_001204504	580963	+	BC038706|C13orf15|28984|chromosome 13 open reading frame 15##AF036549|C13orf15|28984|chromosome 13 open reading frame 15##BC066334|C13orf15|28984|chromosome 13 open reading frame 15##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15##AK095155|KIAA0564|23078|KIAA0564##BC131802|KIAA0564|23078|KIAA0564##BC053674|KIAA0564|23078|KIAA0564##NM_001009814|KIAA0564|23078|KIAA0564##NM_015058|KIAA0564|23078|KIAA0564##AK289546|DGKH|160851|diacylglycerol kinase, eta##NM_001204504|DGKH|160851|diacylglycerol kinase, eta	0.0	
chr15	99911850	99911951	reg1022887.p2	6.361	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-120258	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-120484	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-122194	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	194253	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	194294	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	194335	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.037797	
chr3	455893	456032	reg1021103.p1	6.361	+	NM_001253388 BC104918 BC143496 BC143498 AB384920	-94550	+	TSC_hg19_v1_chr3_+_239671 AK055236	-216291	+	TSC_hg19_v1_chr3_+_238541 AF002246	-217370	+	AK126307 TSC_hg19_v1_chr3_+_577916	121953	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	678701	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	1684599	+	NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK055236|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AF002246|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4	0.980246	CTCF.p2:-23:0.980
chr3	98424705	98424806	reg1021602.p1	6.361	+	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	-112336	-	AK313375 BC101779 BC101781 BC069437 CU686810 NM_005290	-173946	+	TSC_hg19_v1_chr3_-_98241835 NM_001040181 NM_001040182 NM_001040183 NM_001040199 NM_001040200 NM_019895	-182889	-	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	26490	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	26832	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	195737	-	AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AK313375|GPR15|2838|G protein-coupled receptor 15##BC101779|GPR15|2838|G protein-coupled receptor 15##BC101781|GPR15|2838|G protein-coupled receptor 15##BC069437|GPR15|2838|G protein-coupled receptor 15##NM_005290|GPR15|2838|G protein-coupled receptor 15##NM_001040181|CLDND1|56650|claudin domain containing 1##NM_001040182|CLDND1|56650|claudin domain containing 1##NM_001040183|CLDND1|56650|claudin domain containing 1##NM_001040199|CLDND1|56650|claudin domain containing 1##NM_001040200|CLDND1|56650|claudin domain containing 1##NM_019895|CLDND1|56650|claudin domain containing 1##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2	0.460016	CTCF.p2:-14:0.460
chr5	140739448	140739574	reg1025219.p1	6.361	+	AB527386 AF152324 AF152511 NM_018917 NM_032053	-4744	+	TSC_hg19_v1_chr5_+_140729723 AF152330 AF152517 BC103926 BC103927 BC103928 NM_018922 NM_032095	-9736	+	AF152323 AF152509 AF152510 BC115408 BC115409 NM_018916 NM_032011 BC133708	-15910	+	TSC_hg19_v1_chr5_+_140739589 BC101805 AF152331 AF152518 NM_018923 NM_032096	134	+	TSC_hg19_v1_chr5_+_140743759 BC104926 BC113460 AF152325 AF152512 NM_018918 NM_032054	4315	+	BC150172 AF152332 AF152519 NM_018924 NM_032097	10384	+	AF152324|PCDHGA4|56111|protocadherin gamma subfamily A, 4##AF152511|PCDHGA4|56111|protocadherin gamma subfamily A, 4##NM_018917|PCDHGA4|56111|protocadherin gamma subfamily A, 4##NM_032053|PCDHGA4|56111|protocadherin gamma subfamily A, 4##AF152330|PCDHGB1|56104|protocadherin gamma subfamily B, 1##AF152517|PCDHGB1|56104|protocadherin gamma subfamily B, 1##BC103926|PCDHGB1|56104|protocadherin gamma subfamily B, 1##BC103927|PCDHGB1|56104|protocadherin gamma subfamily B, 1##BC103928|PCDHGB1|56104|protocadherin gamma subfamily B, 1##NM_018922|PCDHGB1|56104|protocadherin gamma subfamily B, 1##NM_032095|PCDHGB1|56104|protocadherin gamma subfamily B, 1##AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3##AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3##AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3##BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3##BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3##NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3##NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3##BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3##BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2##AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2##AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2##NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2##NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2##BC104926|PCDHGA5|56110|protocadherin gamma subfamily A, 5##BC113460|PCDHGA5|56110|protocadherin gamma subfamily A, 5##AF152325|PCDHGA5|56110|protocadherin gamma subfamily A, 5##AF152512|PCDHGA5|56110|protocadherin gamma subfamily A, 5##NM_018918|PCDHGA5|56110|protocadherin gamma subfamily A, 5##NM_032054|PCDHGA5|56110|protocadherin gamma subfamily A, 5##BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3##AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3##AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3##NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3##NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3	0.0	
chr6_qbl_hap6	2176393	2176525	reg1025924.p1	6.361	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.51578	CTCF.p2:-12:0.516
chr11	397301	397447	reg1026540.p1	6.360	+	AF053719 TSC_hg19_v1_chr11_+_394242 DQ891692 DQ894875 CU674026	-3110	+	TSC_hg19_v1_chr11_+_394208 BC000081 NM_007183 AK025067 AK223511 Z98265	-3162	+	TSC_hg19_v1_chr11_+_369724 NM_178537 AB089939 BC131528	-27609	+	BC106007 NM_001135054 TSC_hg19_v1_chr11_-_415025	17630	-	BC025953 AK025099 AK172830 NM_001135053 NM_021805 AK093427	20015	-	BC144415 AK026923 TSC_hg19_v1_chr11_-_441974 AK303642 BC128557	44597	-	AF053719|PKP3|11187|plakophilin 3##DQ891692|PKP3|11187|plakophilin 3##DQ894875|PKP3|11187|plakophilin 3##BC000081|PKP3|11187|plakophilin 3##NM_007183|PKP3|11187|plakophilin 3##AK025067|PKP3|11187|plakophilin 3##AK223511|PKP3|11187|plakophilin 3##Z98265|PKP3|11187|plakophilin 3##NM_178537|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##AB089939|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC131528|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC106007|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_001135054|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##BC025953|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK025099|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK172830|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_001135053|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_021805|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK093427|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##BC144415|ANO9|338440|anoctamin 9##AK026923|ANO9|338440|anoctamin 9##AK303642|ANO9|338440|anoctamin 9##BC128557|ANO9|338440|anoctamin 9	0.158673	
chr16	1463754	1463907	reg1020070.p1	6.360	+	TSC_hg19_v1_chr16_-_1429645 BC000150 AK027013 NM_001193389 NM_023076	-34165	-	TSC_hg19_v1_chr16_+_1401951 BC014592 DQ890827 DQ893981 AF302786 CU677055 AY203933 BC131525	-61810	+	NM_032520 TSC_hg19_v1_chr16_+_1401931 AK312067	-61914	+	TSC_hg19_v1_chr16_-_1464697 AM944365 BC011924 AK124977 NM_001037125 NM_001193388	848	-	TSC_hg19_v1_chr16_-_1470746 BC073941 BC063715 BC023590 BC092497	6905	-	NM_001010878 AB463766	15514	-	BC000150|UNKL|64718|unkempt homolog (Drosophila)-like##AK027013|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001193389|UNKL|64718|unkempt homolog (Drosophila)-like##NM_023076|UNKL|64718|unkempt homolog (Drosophila)-like##BC014592|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##DQ890827|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##DQ893981|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AF302786|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AY203933|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##BC131525|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##NM_032520|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AK312067|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AM944365|UNKL|64718|unkempt homolog (Drosophila)-like##BC011924|UNKL|64718|unkempt homolog (Drosophila)-like##AK124977|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001037125|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001193388|UNKL|64718|unkempt homolog (Drosophila)-like##BC023590|C16orf91|283951|chromosome 16 open reading frame 91##BC092497|C16orf91|283951|chromosome 16 open reading frame 91##NM_001010878|C16orf91|283951|chromosome 16 open reading frame 91	0.990431	CTCF.p2:2:0.962
chr16	49475317	49475428	reg1021954.p1	6.360	+	BC021181 BC021718 NM_144602 CU676858	-67544	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-159638	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	-159872	-	NM_015069	385545	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	583768	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	624521	+	BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##NM_015069|ZNF423|23090|zinc finger protein 423##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3	0.859411	CTCF.p2:-9:0.859
chr1	65507250	65507377	reg1021536.p2	6.360	+	TSC_hg19_v1_chr1_-_65432203 BC111401	-75085	-	TSC_hg19_v1_chr1_-_65432181 BC062431 BC009079 NM_002227	-75299	-	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	-296514	+	TSC_hg19_v1_chr1_+_65613263 NM_203464 BC146653 BC016180 AK309057 BC066944 NM_001005353	106048	+	TSC_hg19_v1_chr1_+_65613835 NM_013410 AK025926 AK313611 X60673	106535	+	TSC_hg19_v1_chr1_+_65613971 BC040224 BC136886 BC136887 BC148270 CR456830 CU688216 DQ892294 DQ895494	106717	+	BC111401|JAK1|3716|Janus kinase 1##BC062431|JAK1|3716|Janus kinase 1##BC009079|JAK1|3716|Janus kinase 1##NM_002227|JAK1|3716|Janus kinase 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_203464|AK4|205|adenylate kinase 4##BC146653|AK4|205|adenylate kinase 4##BC016180|AK4|205|adenylate kinase 4##AK309057|AK4|205|adenylate kinase 4##BC066944|AK4|205|adenylate kinase 4##NM_001005353|AK4|205|adenylate kinase 4##NM_013410|AK4|205|adenylate kinase 4##AK025926|AK4|205|adenylate kinase 4##AK313611|AK4|205|adenylate kinase 4##X60673|AK4|205|adenylate kinase 4##BC040224|AK4|205|adenylate kinase 4##BC136886|AK4|205|adenylate kinase 4##BC136887|AK4|205|adenylate kinase 4##BC148270|AK4|205|adenylate kinase 4##CR456830|AK4|205|adenylate kinase 4##DQ892294|AK4|205|adenylate kinase 4##DQ895494|AK4|205|adenylate kinase 4	0.0	
chr11	120903302	120903410	reg1021268.p1	6.359	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	-8546	+	AB384776 NM_014619 S67803	-372329	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-520891	+	NM_005422	70018	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	260049	+	TSC_hg19_v1_chr11_+_121163484 AK096847 AK223141 AK222686	260126	+	AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##NM_005422|TECTA|7007|tectorin alpha##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK096847|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK223141|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK222686|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.060161	
chr16	29740673	29740826	reg1023606.p1	6.359	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-50267	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-50355	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-65735	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	16552	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	48837	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	61302	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.850277	CTCF.p2:-10:0.850
chr4	145708676	145708776	reg1021914.p1	6.359	+	NM_022475 AY009951 TSC_hg19_v1_chr4_+_145567307 AY009317 BC025311 BC015636 BC009298	-141478	+	AY950614 DQ893046 L07251 L07253 S77893 U00177 U00178 U00179 X57023 M12857 M36281 X51798 BC013328 EU338231 EU338232 EU338233 EU338234 L31860 X08054 BC005319 AK290561 NM_002099	-646881	-	AY509882 AY509883 AY950609 AY950610 AY950611 AY950612 U05255 J02982 BC121077 BC121078 EU338223 EU338224 EU338225 EU338226 EU338227 EU338228 EU338229 EU338230 EU338235 EU338236 EU338237 EU338238 BC069310 X08055 NM_002100	-768259	-	NM_001040876 NM_002940	310429	+	TSC_hg19_v1_chr4_-_146019349 AF132794 AL080090 BC005217 AB012109 NM_014885	310611	-	TSC_hg19_v1_chr4_+_146019465 AK315198 AB062293	310700	+	NM_022475|HHIP|64399|hedgehog interacting protein##AY009951|HHIP|64399|hedgehog interacting protein##AY009317|HHIP|64399|hedgehog interacting protein##BC025311|HHIP|64399|hedgehog interacting protein##BC015636|HHIP|64399|hedgehog interacting protein##BC009298|HHIP|64399|hedgehog interacting protein##AY950614|GYPA|2993|glycophorin A (MNS blood group)##DQ893046|GYPA|2993|glycophorin A (MNS blood group)##L07251|GYPA|2993|glycophorin A (MNS blood group)##L07253|GYPA|2993|glycophorin A (MNS blood group)##U00177|GYPA|2993|glycophorin A (MNS blood group)##U00178|GYPA|2993|glycophorin A (MNS blood group)##U00179|GYPA|2993|glycophorin A (MNS blood group)##X57023|GYPA|2993|glycophorin A (MNS blood group)##M12857|GYPA|2993|glycophorin A (MNS blood group)##M36281|GYPA|2993|glycophorin A (MNS blood group)##X51798|GYPA|2993|glycophorin A (MNS blood group)##BC013328|GYPA|2993|glycophorin A (MNS blood group)##EU338231|GYPA|2993|glycophorin A (MNS blood group)##EU338232|GYPA|2993|glycophorin A (MNS blood group)##EU338233|GYPA|2993|glycophorin A (MNS blood group)##EU338234|GYPA|2993|glycophorin A (MNS blood group)##L31860|GYPA|2993|glycophorin A (MNS blood group)##X08054|GYPA|2993|glycophorin A (MNS blood group)##BC005319|GYPA|2993|glycophorin A (MNS blood group)##AK290561|GYPA|2993|glycophorin A (MNS blood group)##NM_002099|GYPA|2993|glycophorin A (MNS blood group)##AY509882|GYPB|2994|glycophorin B (MNS blood group)##AY509883|GYPB|2994|glycophorin B (MNS blood group)##AY950609|GYPB|2994|glycophorin B (MNS blood group)##AY950610|GYPB|2994|glycophorin B (MNS blood group)##AY950611|GYPB|2994|glycophorin B (MNS blood group)##U05255|GYPB|2994|glycophorin B (MNS blood group)##J02982|GYPB|2994|glycophorin B (MNS blood group)##BC121077|GYPB|2994|glycophorin B (MNS blood group)##BC121078|GYPB|2994|glycophorin B (MNS blood group)##EU338223|GYPB|2994|glycophorin B (MNS blood group)##EU338224|GYPB|2994|glycophorin B (MNS blood group)##EU338225|GYPB|2994|glycophorin B (MNS blood group)##EU338226|GYPB|2994|glycophorin B (MNS blood group)##EU338227|GYPB|2994|glycophorin B (MNS blood group)##EU338228|GYPB|2994|glycophorin B (MNS blood group)##EU338229|GYPB|2994|glycophorin B (MNS blood group)##EU338230|GYPB|2994|glycophorin B (MNS blood group)##EU338235|GYPB|2994|glycophorin B (MNS blood group)##EU338236|GYPB|2994|glycophorin B (MNS blood group)##EU338237|GYPB|2994|glycophorin B (MNS blood group)##EU338238|GYPB|2994|glycophorin B (MNS blood group)##BC069310|GYPB|2994|glycophorin B (MNS blood group)##X08055|GYPB|2994|glycophorin B (MNS blood group)##NM_002100|GYPB|2994|glycophorin B (MNS blood group)##NM_001040876|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##NM_002940|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##AF132794|ANAPC10|10393|anaphase promoting complex subunit 10##AL080090|ANAPC10|10393|anaphase promoting complex subunit 10##BC005217|ANAPC10|10393|anaphase promoting complex subunit 10##AB012109|ANAPC10|10393|anaphase promoting complex subunit 10##NM_014885|ANAPC10|10393|anaphase promoting complex subunit 10##AK315198|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##AB062293|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1	0.995756	CTCF.p2:1:0.996
chr6	166926192	166926294	reg1022213.p1	6.359	+	TSC_hg19_v1_chr6_-_166796469 AF125101 AF151887 NM_016098	-129733	-	CU674406 TSC_hg19_v1_chr6_-_166796429 BC000810 AK312201 AK310934	-129834	-	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	-170209	-	DQ891864 DQ895053 L07598 TSC_hg19_v1_chr6_-_167040629	114334	-	TSC_hg19_v1_chr6_-_167040662 X85106	114426	-	TSC_hg19_v1_chr6_-_167040713 BC002363 NM_021135	114475	-	AF125101|BRP44L|51660|brain protein 44-like##AF151887|BRP44L|51660|brain protein 44-like##NM_016098|BRP44L|51660|brain protein 44-like##BC000810|BRP44L|51660|brain protein 44-like##AK312201|BRP44L|51660|brain protein 44-like##AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1##DQ891864|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##DQ895053|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##L07598|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##X85106|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	0.341992	CTCF.p2:0:0.342
chr2	112655341	112655458	reg1039253.p2	6.358	+	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	-13638	-	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	-13773	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-776912	+	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	786	+	TSC_hg19_v1_chr2_+_112656224 BC114917 BC114918	821	+	NM_032824 AK027587 TSC_hg19_v1_chr2_+_112812871	157442	+	AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase##BC114917|MERTK|10461|c-mer proto-oncogene tyrosine kinase##BC114918|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_032824|TMEM87B|84910|transmembrane protein 87B##AK027587|TMEM87B|84910|transmembrane protein 87B	0.0	
chr2	177518710	177518838	reg1022041.p1	6.358	+	BC013438 TSC_hg19_v1_chr2_-_177502718	-16086	-	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-384535	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-465358	+	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	558700	+	AK311688 NM_001145412 NM_001145413	609797	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	610602	-	BC013438|LOC375295|375295|uncharacterized LOC375295##NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.608766	CTCF.p2:12:0.609
chr22	26173942	26174098	reg1023919.p1	6.358	+	TSC_hg19_v1_chr22_+_26138168 AY077700	-35836	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	-35900	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-213074	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	391417	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	391477	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	391643	+	AY077700|MYO18B|84700|myosin XVIIIB##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.998557	CTCF.p2:5:0.999
chr4	106636951	106637084	reg1021087.p1	6.358	+	AK292355 BC032942 NM_001031720	-5050	+	TSC_hg19_v1_chr4_+_106629965 AK303547 BX648355 NM_024751 AK023335 AK225563	-7044	+	TSC_hg19_v1_chr4_-_106629819 BC014442 AK314939 NM_001142471 NM_020395	-7176	-	TSC_hg19_v1_chr4_+_106816593 AK295772 NM_001033047 NM_001184690 NM_001184691 NM_001184692 NM_001184693 AK302477 AK304279 AY358336	179584	+	TSC_hg19_v1_chr4_+_106816634 AK290029 AK304721 AL832465 BC131587	179673	+	NM_001142415 AK297950 AK095951 NM_004757	599792	+	AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BC014442|INTS12|57117|integrator complex subunit 12##AK314939|INTS12|57117|integrator complex subunit 12##NM_001142471|INTS12|57117|integrator complex subunit 12##NM_020395|INTS12|57117|integrator complex subunit 12##AK295772|NPNT|255743|nephronectin##NM_001033047|NPNT|255743|nephronectin##NM_001184690|NPNT|255743|nephronectin##NM_001184691|NPNT|255743|nephronectin##NM_001184692|NPNT|255743|nephronectin##NM_001184693|NPNT|255743|nephronectin##AK302477|NPNT|255743|nephronectin##AK304279|NPNT|255743|nephronectin##AY358336|NPNT|255743|nephronectin##AK290029|NPNT|255743|nephronectin##AK304721|NPNT|255743|nephronectin##AL832465|NPNT|255743|nephronectin##BC131587|NPNT|255743|nephronectin##NM_001142415|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##AK297950|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##AK095951|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_004757|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	0.990121	CTCF.p2:18:0.990
chr10	124027703	124027835	reg1021537.p1	6.357	+	NM_006997 NM_206860 TSC_hg19_v1_chr10_+_123923144 BC141837 BC142673 AF095791	-104538	+	BC039311 TSC_hg19_v1_chr10_+_123923007	-104794	+	TSC_hg19_v1_chr10_+_123872541 BC015736	-155248	+	AK058088 NM_144587 BC109261 BC109262	3060	+	NM_001001974 TSC_hg19_v1_chr10_+_124134144	106350	+	AK314660 TSC_hg19_v1_chr10_+_124134274 BC001136	106476	+	NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC015736|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AK058088|BTBD16|118663|BTB (POZ) domain containing 16##NM_144587|BTBD16|118663|BTB (POZ) domain containing 16##BC109261|BTBD16|118663|BTB (POZ) domain containing 16##BC109262|BTBD16|118663|BTB (POZ) domain containing 16##NM_001001974|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##AK314660|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##BC001136|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1	0.970636	CTCF.p2:-2:0.971
chr17	1532412	1532534	reg1005283.p1	6.357	+	TSC_hg19_v1_chr17_-_1532115 BC027923 NM_152346 BC071859	-329	-	AF289592 TSC_hg19_v1_chr17_-_1531711 AB120364	-833	-	BC082976 TSC_hg19_v1_chr17_-_1466077 BC027177 D30036 M73704 BC045108 BC068538 NM_006224	-66391	-	D63483 AK310174 AB052950 AB052949 AB052947 D86864 TSC_hg19_v1_chr17_-_1549050 AK291810 AB052948 BC039735 NM_003693 NM_145350 NM_145352 AK298737	16564	-	DQ892467 DQ895680 TSC_hg19_v1_chr17_-_1553162 BC031621 AF370391 AJ404317 AK055755 AK314767 AJ278711 NM_031430	20772	-	TSC_hg19_v1_chr17_-_1588115 AB007510 AF092565	55635	-	BC027923|SLC43A2|124935|solute carrier family 43, member 2##NM_152346|SLC43A2|124935|solute carrier family 43, member 2##BC071859|SLC43A2|124935|solute carrier family 43, member 2##AF289592|SLC43A2|124935|solute carrier family 43, member 2##AB120364|SLC43A2|124935|solute carrier family 43, member 2##BC082976|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC027177|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D30036|PITPNA|5306|phosphatidylinositol transfer protein, alpha##M73704|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC045108|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC068538|PITPNA|5306|phosphatidylinositol transfer protein, alpha##NM_006224|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D63483|SCARF1|8578|scavenger receptor class F, member 1##AK310174|SCARF1|8578|scavenger receptor class F, member 1##AB052950|SCARF1|8578|scavenger receptor class F, member 1##AB052949|SCARF1|8578|scavenger receptor class F, member 1##AB052947|SCARF1|8578|scavenger receptor class F, member 1##D86864|SCARF1|8578|scavenger receptor class F, member 1##AK291810|SCARF1|8578|scavenger receptor class F, member 1##AB052948|SCARF1|8578|scavenger receptor class F, member 1##BC039735|SCARF1|8578|scavenger receptor class F, member 1##NM_003693|SCARF1|8578|scavenger receptor class F, member 1##NM_145350|SCARF1|8578|scavenger receptor class F, member 1##NM_145352|SCARF1|8578|scavenger receptor class F, member 1##AK298737|SCARF1|8578|scavenger receptor class F, member 1##DQ892467|RILP|83547|Rab interacting lysosomal protein##DQ895680|RILP|83547|Rab interacting lysosomal protein##BC031621|RILP|83547|Rab interacting lysosomal protein##AF370391|RILP|83547|Rab interacting lysosomal protein##AJ404317|RILP|83547|Rab interacting lysosomal protein##AK055755|RILP|83547|Rab interacting lysosomal protein##AK314767|RILP|83547|Rab interacting lysosomal protein##AJ278711|RILP|83547|Rab interacting lysosomal protein##NM_031430|RILP|83547|Rab interacting lysosomal protein##AB007510|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##AF092565|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)	0.255697	CTCF.p2:32:0.256
chrX	153550068	153550242	reg1023462.p2	6.357	+	NM_001145934	-16747	+	NM_001145933 NM_012253 AK301724 TSC_hg19_v1_chrX_+_153524147 AK292261 AK302044 BC025382 AK302261 AK292224 AB527362 AM392578 AM393533 CU692986	-26036	+	DQ655913 TSC_hg19_v1_chrX_-_153523933	-26290	-	TSC_hg19_v1_chrX_-_153599586 AB191259 AB371575 AB371577 AB371578 AB371579 AB191260 AB371574 AB371576 AB463042 AK090427	49460	-	TSC_hg19_v1_chrX_-_153599726 AB593010	49567	-	X53416 TSC_hg19_v1_chrX_-_153602972	52795	-	NM_001145934|TKTL1|8277|transketolase-like 1##NM_001145933|TKTL1|8277|transketolase-like 1##NM_012253|TKTL1|8277|transketolase-like 1##AK301724|TKTL1|8277|transketolase-like 1##AK292261|TKTL1|8277|transketolase-like 1##AK302044|TKTL1|8277|transketolase-like 1##BC025382|TKTL1|8277|transketolase-like 1##AK302261|TKTL1|8277|transketolase-like 1##AK292224|TKTL1|8277|transketolase-like 1##AM392578|TKTL1|8277|transketolase-like 1##AM393533|TKTL1|8277|transketolase-like 1##DQ655913|TEX28|1527|testis expressed 28##AB191259|FLNA|2316|filamin A, alpha##AB371575|FLNA|2316|filamin A, alpha##AB371577|FLNA|2316|filamin A, alpha##AB371578|FLNA|2316|filamin A, alpha##AB371579|FLNA|2316|filamin A, alpha##AB191260|FLNA|2316|filamin A, alpha##AB371574|FLNA|2316|filamin A, alpha##AB371576|FLNA|2316|filamin A, alpha##AK090427|FLNA|2316|filamin A, alpha##AB593010|FLNA|2316|filamin A, alpha##X53416|FLNA|2316|filamin A, alpha	0.021052	
chr10	7450597	7450699	reg1020071.p2	6.356	+	TSC_hg19_v1_chr10_+_6622460 AY007155	-828168	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	-828387	-	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-1205772	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	602	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	2786	-	AK027849 TSC_hg19_v1_chr10_-_7659249	208569	-	AY007155|LOC439949|439949|uncharacterized LOC439949##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.01971	
chr2	114344919	114345025	reg1021842.p1	6.356	+	BC027921 TSC_hg19_v1_chr2_+_114341690	-3273	+	AK292759 AK309926 TSC_hg19_v1_chr2_+_114341689	-3283	+	AL137714 AK302089 AK308574 TSC_hg19_v1_chr2_+_114341674	-3355	+	TSC_hg19_v1_chr2_-_114384648 BC000596 BC105600	39676	-	TSC_hg19_v1_chr2_+_114384811 BC111008 NM_007082 NM_013412	39842	+	TSC_hg19_v1_chr2_+_114384849 AK289496 AF095350 AF095351 BC126129 BC144050 BC144052	39934	+	BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK292759|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##BC000596|RPL23AP7|118433|ribosomal protein L23a pseudogene 7##BC105600|RPL23AP7|118433|ribosomal protein L23a pseudogene 7##BC111008|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##NM_007082|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##NM_013412|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AK289496|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095350|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095351|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC126129|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144050|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144052|RABL2A|11159|RAB, member of RAS oncogene family-like 2A	1.55885	CTCF.p2:-17:0.949	CTCF.p2:-49:0.610
chr6_apd_hap1	4599907	4600034	reg1026331.p1	6.356	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.028597	
chr8	22553315	22553495	reg1023408.p6	6.356	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-2621	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-2900	-	AK294968 AK295834 NM_001199881	-3331	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	231919	-	AK092617 BC034917 NM_001160036	291518	+	NM_001160037	299955	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.0	
chr16	9127446	9127535	reg1018982.p2	6.355	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-70195	-	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	-164630	-	NM_001042476 BC001333	-165238	-	TSC_hg19_v1_chr16_+_9185545 NM_014117	58050	+	TSC_hg19_v1_chr16_+_9185577 BC113570	58113	+	BC143273 U09002 NM_001134408	1148343	-	NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##BC113570|C16orf72|29035|chromosome 16 open reading frame 72##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.998697	CTCF.p2:0:0.999
chr2	187121400	187121531	reg1022181.p1	6.355	+	NM_173651	-518111	+	BC136602 TSC_hg19_v1_chr2_+_185463544	-1657973	+	BC142612 TSC_hg19_v1_chr2_+_185463319	-1658160	+	TSC_hg19_v1_chr2_+_187350986 AF220184 NM_018471 AK298615 AK001901 AK297658 AF289586	229465	+	TSC_hg19_v1_chr2_+_187351010 BC012336 AF161421 AF109366	229545	+	TSC_hg19_v1_chr2_+_187351051 BC021102 EU176353 AB587394 CU676824	229605	+	NM_173651|FSIP2|401024|fibrous sheath interacting protein 2##BC136602|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A##AF220184|ZC3H15|55854|zinc finger CCCH-type containing 15##NM_018471|ZC3H15|55854|zinc finger CCCH-type containing 15##AK298615|ZC3H15|55854|zinc finger CCCH-type containing 15##AK001901|ZC3H15|55854|zinc finger CCCH-type containing 15##AK297658|ZC3H15|55854|zinc finger CCCH-type containing 15##AF289586|ZC3H15|55854|zinc finger CCCH-type containing 15##BC012336|ZC3H15|55854|zinc finger CCCH-type containing 15##AF161421|ZC3H15|55854|zinc finger CCCH-type containing 15##AF109366|ZC3H15|55854|zinc finger CCCH-type containing 15##BC021102|ZC3H15|55854|zinc finger CCCH-type containing 15##EU176353|ZC3H15|55854|zinc finger CCCH-type containing 15	0.903428	CTCF.p2:10:0.903
chr6_mann_hap4	860373	860469	reg1021284.p1	6.355	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.57731	CTCF.p2:12:0.577
chr11	58292170	58292313	reg1022826.p2	6.354	+	NM_001005218	-16664	-	BC136947 BC136948 NM_001004733	-84596	-	BC136923 BC136922 NM_001005566	-101458	-	BC007490 BC019035 TSC_hg19_v1_chr11_-_58343330 AK313306 AK223165 AK301093 AF062075 NM_004811	51107	-	BC034230 TSC_hg19_v1_chr11_-_58345666 AK300955 NM_001143995 AK299264	53420	-	TSC_hg19_v1_chr11_+_58346591 BC051743 NM_001197051 NM_053023	54342	+	NM_001005218|OR5B21|219968|olfactory receptor, family 5, subfamily B, member 21##BC136947|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12##BC136948|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12##NM_001004733|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12##BC136923|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2##BC136922|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2##NM_001005566|OR5B2|390190|olfactory receptor, family 5, subfamily B, member 2##BC007490|LPXN|9404|leupaxin##BC019035|LPXN|9404|leupaxin##AK313306|LPXN|9404|leupaxin##AK223165|LPXN|9404|leupaxin##AK301093|LPXN|9404|leupaxin##AF062075|LPXN|9404|leupaxin##NM_004811|LPXN|9404|leupaxin##BC034230|LPXN|9404|leupaxin##AK300955|LPXN|9404|leupaxin##NM_001143995|LPXN|9404|leupaxin##AK299264|LPXN|9404|leupaxin##BC051743|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_001197051|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_053023|ZFP91|80829|zinc finger protein 91 homolog (mouse)	0.964473	CTCF.p2:-1:0.964
chr1	216394638	216394767	reg1022984.p2	6.354	+	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	-653839	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	-1138092	+	NM_001017424	-1215818	+	AF055580 AY481573 NM_007123 NM_206933	202035	-	HQ692853 AF117255 BC008218 AY388456 AK291647 TSC_hg19_v1_chr1_-_216896791 AB020639 AK290945 BC064700 NM_001243515 NM_001243518 NM_001243519 NM_001438	502024	-	AY388461 NM_001243514	584006	-	BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2##AF055580|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##AY481573|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_007123|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_206933|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##HQ692853|ESRRG|2104|estrogen-related receptor gamma##AF117255|ESRRG|2104|estrogen-related receptor gamma##BC008218|ESRRG|2104|estrogen-related receptor gamma##AY388456|ESRRG|2104|estrogen-related receptor gamma##AK291647|ESRRG|2104|estrogen-related receptor gamma##AB020639|ESRRG|2104|estrogen-related receptor gamma##AK290945|ESRRG|2104|estrogen-related receptor gamma##BC064700|ESRRG|2104|estrogen-related receptor gamma##NM_001243515|ESRRG|2104|estrogen-related receptor gamma##NM_001243518|ESRRG|2104|estrogen-related receptor gamma##NM_001243519|ESRRG|2104|estrogen-related receptor gamma##NM_001438|ESRRG|2104|estrogen-related receptor gamma##AY388461|ESRRG|2104|estrogen-related receptor gamma##NM_001243514|ESRRG|2104|estrogen-related receptor gamma	0.949787	CTCF.p2:-12:0.950
chr5	12023872	12024053	reg1022349.p2	6.354	+	TSC_hg19_v1_chr5_-_11904184 AK296232	-119778	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	-119926	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	-1262563	-	AX800026 AY045575 NM_001369	1920626	-	AY050643 TSC_hg19_v1_chr5_-_14011873	1987908	-	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	2119710	+	AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_004394|DAP|1611|death-associated protein##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)	0.998861	CTCF.p2:-16:0.999
chr8	94995377	94995499	reg1020597.p1	6.354	+	NM_001161778 AB590483 TSC_hg19_v1_chr8_+_94930074 AK302651	-65403	+	NM_018444 TSC_hg19_v1_chr8_+_94929171 BC047619 NM_001161780 AK057079 NM_001161779 BC064978 AF155661 NM_001161781	-66258	+	AK308071 NM_001142301 NM_153704 AK092244 AX747428 TSC_hg19_v1_chr8_+_94767121 AK308735 BX648768 BC031220 BC017974 BC054338 AK094935 BC032835	-228324	+	U07969 BC112013 BC113464 TSC_hg19_v1_chr8_-_95220784 X83228 AK301001 NM_004063	225356	-	AK312873 NM_001144663	234092	-	U10550 TSC_hg19_v1_chr8_-_95274525	279084	-	NM_001161778|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK302651|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_018444|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC047619|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161780|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK057079|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161779|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC064978|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AF155661|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161781|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK308071|TMEM67|91147|transmembrane protein 67##NM_001142301|TMEM67|91147|transmembrane protein 67##NM_153704|TMEM67|91147|transmembrane protein 67##AK092244|TMEM67|91147|transmembrane protein 67##AK308735|TMEM67|91147|transmembrane protein 67##BX648768|TMEM67|91147|transmembrane protein 67##BC031220|TMEM67|91147|transmembrane protein 67##BC017974|TMEM67|91147|transmembrane protein 67##BC054338|TMEM67|91147|transmembrane protein 67##AK094935|TMEM67|91147|transmembrane protein 67##BC032835|TMEM67|91147|transmembrane protein 67##U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle	0.965079	CTCF.p2:-6:0.965
chr9	101998277	101998416	reg1023823.p1	6.354	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-13759	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-14103	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-14129	-	TSC_hg19_v1_chr9_-_102582187 AK057451	583819	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	585811	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	670581	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.075639	
chr13	103568657	103568794	reg1000751.p2	6.353	+	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-70239	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-70471	+	TSC_hg19_v1_chr13_+_103498240 NM_000123 BC031522 AF462447	-70516	+	NM_000452 U10417	150470	-	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	2549579	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	2549866	+	BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000123|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##BC031522|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AF462447|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator	0.0	
chrX	46763426	46763607	reg1007959.p2	6.353	+	TSC_hg19_v1_chrX_+_46696479 AK312555 CU692158	-67012	+	BC043348 BC053530 TSC_hg19_v1_chrX_+_46696426	-67090	+	NM_006915 AJ007590 TSC_hg19_v1_chrX_+_46696391 BC027851	-67139	+	TSC_hg19_v1_chrX_+_46771855 AK291220 NM_001077445 D86969 NM_014735 BC113880 BC114487 AF127774	8419	+	TSC_hg19_v1_chrX_+_46937753 AK223360 NM_004683 NM_152869	174243	+	TSC_hg19_v1_chrX_+_46937812 BC050371 BC058880 AK290136	174321	+	AK312555|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC043348|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC053530|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AK291220|PHF16|9767|PHD finger protein 16##NM_001077445|PHF16|9767|PHD finger protein 16##D86969|PHF16|9767|PHD finger protein 16##NM_014735|PHF16|9767|PHD finger protein 16##BC113880|PHF16|9767|PHD finger protein 16##BC114487|PHF16|9767|PHD finger protein 16##AF127774|PHF16|9767|PHD finger protein 16##AK223360|RGN|9104|regucalcin (senescence marker protein-30)##NM_004683|RGN|9104|regucalcin (senescence marker protein-30)##NM_152869|RGN|9104|regucalcin (senescence marker protein-30)##BC050371|RGN|9104|regucalcin (senescence marker protein-30)##BC058880|RGN|9104|regucalcin (senescence marker protein-30)##AK290136|RGN|9104|regucalcin (senescence marker protein-30)	0.107619	
chr1	111984322	111984443	reg1020687.p2	6.352	+	U09550 AK298757 AK314074 BC126177 BC136406 AY189737 NM_002557	-14006	-	BC093891 BC101501 HM237139 NM_181643 AK303897 BC050319 AK310801 AK074433 BC068603 HM237140	-95148	+	AK290702 AB025008 AB025009 AY825504 NM_021797 AF290004 AY789444 NM_201653	-150877	+	NM_001688	7360	+	AB529135 AF478464 CU679349 AF052183 AY225316 TSC_hg19_v1_chr1_-_111991843 BC016946 NM_024102 BC001679 BC006477	7438	-	AK022860 AK223189 BC009411 TSC_hg19_v1_chr1_-_111991879 BC011778 AK296163 AK298179 AB073603	7487	-	U09550|OVGP1|5016|oviductal glycoprotein 1, 120kDa##AK298757|OVGP1|5016|oviductal glycoprotein 1, 120kDa##AK314074|OVGP1|5016|oviductal glycoprotein 1, 120kDa##BC126177|OVGP1|5016|oviductal glycoprotein 1, 120kDa##BC136406|OVGP1|5016|oviductal glycoprotein 1, 120kDa##AY189737|OVGP1|5016|oviductal glycoprotein 1, 120kDa##NM_002557|OVGP1|5016|oviductal glycoprotein 1, 120kDa##BC093891|C1orf88|128344|chromosome 1 open reading frame 88##BC101501|C1orf88|128344|chromosome 1 open reading frame 88##HM237139|C1orf88|128344|chromosome 1 open reading frame 88##NM_181643|C1orf88|128344|chromosome 1 open reading frame 88##AK303897|C1orf88|128344|chromosome 1 open reading frame 88##BC050319|C1orf88|128344|chromosome 1 open reading frame 88##AK310801|C1orf88|128344|chromosome 1 open reading frame 88##AK074433|C1orf88|128344|chromosome 1 open reading frame 88##BC068603|C1orf88|128344|chromosome 1 open reading frame 88##HM237140|C1orf88|128344|chromosome 1 open reading frame 88##AK290702|CHIA|27159|chitinase, acidic##AB025008|CHIA|27159|chitinase, acidic##AB025009|CHIA|27159|chitinase, acidic##AY825504|CHIA|27159|chitinase, acidic##NM_021797|CHIA|27159|chitinase, acidic##AF290004|CHIA|27159|chitinase, acidic##AY789444|CHIA|27159|chitinase, acidic##NM_201653|CHIA|27159|chitinase, acidic##NM_001688|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1##AF478464|WDR77|79084|WD repeat domain 77##AF052183|WDR77|79084|WD repeat domain 77##AY225316|WDR77|79084|WD repeat domain 77##BC016946|WDR77|79084|WD repeat domain 77##NM_024102|WDR77|79084|WD repeat domain 77##BC001679|WDR77|79084|WD repeat domain 77##BC006477|WDR77|79084|WD repeat domain 77##AK022860|WDR77|79084|WD repeat domain 77##AK223189|WDR77|79084|WD repeat domain 77##BC009411|WDR77|79084|WD repeat domain 77##BC011778|WDR77|79084|WD repeat domain 77##AK296163|WDR77|79084|WD repeat domain 77##AK298179|WDR77|79084|WD repeat domain 77##AB073603|WDR77|79084|WD repeat domain 77	0.996653	CTCF.p2:0:0.997
chr2	235459442	235459622	reg1001349.p2	6.352	+	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	-53813	-	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-500145	+	AY090109 NM_024080 BC126342 BC143819	-633487	+	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	401126	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	943271	+	TSC_hg19_v1_chr2_+_236402950 BC140856	943445	+	NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.0	
chr5	56634034	56634186	reg1022607.p1	6.351	+	NM_001127236 AL136844 AB463051 AM392551 AM393442	-124182	+	BC113004 NM_001127235	-162837	+	TSC_hg19_v1_chr5_+_56469911 AL161991 AY226828	-164213	+	BC137470 BC137473 BX648504 NM_001017992	144484	-	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	1121826	-	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	1153184	+	NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1##AL161991|GPBP1|65056|GC-rich promoter binding protein 1##AY226828|GPBP1|65056|GC-rich promoter binding protein 1##BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane	0.985864	CTCF.p2:-4:0.986
chrX	16844450	16844555	reg1019132.p1	6.351	+	TSC_hg19_v1_chrX_+_16804588 NM_001168683 NM_018360 AK002071 BC101572 BC101576 AY739713	-39894	+	TSC_hg19_v1_chrX_+_16737761 AK314675 AK303783 AF168955 AF338728 AK295322 AK027401 AK222856 BC001468 BC014657 AB528559 CU677083 EU831445	-106713	+	TSC_hg19_v1_chrX_+_16737703 NM_032796 CR749849	-106811	+	AK091911 AX747249 NM_001198719 TSC_hg19_v1_chrX_-_16888008	43491	-	AB463219 CR541701 AK291567 TSC_hg19_v1_chrX_-_16888381 BC114500 BC114501 U35143	43803	-	TSC_hg19_v1_chrX_-_16888456 X72841	43949	-	NM_001168683|TXLNG|55787|taxilin gamma##NM_018360|TXLNG|55787|taxilin gamma##AK002071|TXLNG|55787|taxilin gamma##BC101572|TXLNG|55787|taxilin gamma##BC101576|TXLNG|55787|taxilin gamma##AY739713|TXLNG|55787|taxilin gamma##AK314675|SYAP1|94056|synapse associated protein 1##AK303783|SYAP1|94056|synapse associated protein 1##AF168955|SYAP1|94056|synapse associated protein 1##AF338728|SYAP1|94056|synapse associated protein 1##AK295322|SYAP1|94056|synapse associated protein 1##AK027401|SYAP1|94056|synapse associated protein 1##AK222856|SYAP1|94056|synapse associated protein 1##BC001468|SYAP1|94056|synapse associated protein 1##BC014657|SYAP1|94056|synapse associated protein 1##EU831445|SYAP1|94056|synapse associated protein 1##NM_032796|SYAP1|94056|synapse associated protein 1##CR749849|SYAP1|94056|synapse associated protein 1##AK091911|RBBP7|5931|retinoblastoma binding protein 7##NM_001198719|RBBP7|5931|retinoblastoma binding protein 7##CR541701|RBBP7|5931|retinoblastoma binding protein 7##AK291567|RBBP7|5931|retinoblastoma binding protein 7##BC114500|RBBP7|5931|retinoblastoma binding protein 7##BC114501|RBBP7|5931|retinoblastoma binding protein 7##U35143|RBBP7|5931|retinoblastoma binding protein 7##X72841|RBBP7|5931|retinoblastoma binding protein 7	0.909833	CTCF.p2:-11:0.910
chr11	27727564	27727694	reg1023034.p2	6.350	+	AB038672 AY054397 BC029795 EF674521 NM_170733	-4509	-	EF689011 EF689012 EF689019 EF689020 NM_001143808 NM_001143809 NM_001143810 NM_001143811	-5030	-	EF689013 NM_001143812	-5183	-	AY054396 EF674520 NM_001143807	13613	-	AB038671 AY054393 AY054394 AY054395 EF674517 EF674518 EF674519 NM_001143805 NM_001143806 NM_170732	14645	-	EF689021 NM_170731	15975	-	AB038672|BDNF|627|brain-derived neurotrophic factor##AY054397|BDNF|627|brain-derived neurotrophic factor##BC029795|BDNF|627|brain-derived neurotrophic factor##EF674521|BDNF|627|brain-derived neurotrophic factor##NM_170733|BDNF|627|brain-derived neurotrophic factor##EF689011|BDNF|627|brain-derived neurotrophic factor##EF689012|BDNF|627|brain-derived neurotrophic factor##EF689019|BDNF|627|brain-derived neurotrophic factor##EF689020|BDNF|627|brain-derived neurotrophic factor##NM_001143808|BDNF|627|brain-derived neurotrophic factor##NM_001143809|BDNF|627|brain-derived neurotrophic factor##NM_001143810|BDNF|627|brain-derived neurotrophic factor##NM_001143811|BDNF|627|brain-derived neurotrophic factor##EF689013|BDNF|627|brain-derived neurotrophic factor##NM_001143812|BDNF|627|brain-derived neurotrophic factor##AY054396|BDNF|627|brain-derived neurotrophic factor##EF674520|BDNF|627|brain-derived neurotrophic factor##NM_001143807|BDNF|627|brain-derived neurotrophic factor##AB038671|BDNF|627|brain-derived neurotrophic factor##AY054393|BDNF|627|brain-derived neurotrophic factor##AY054394|BDNF|627|brain-derived neurotrophic factor##AY054395|BDNF|627|brain-derived neurotrophic factor##EF674517|BDNF|627|brain-derived neurotrophic factor##EF674518|BDNF|627|brain-derived neurotrophic factor##EF674519|BDNF|627|brain-derived neurotrophic factor##NM_001143805|BDNF|627|brain-derived neurotrophic factor##NM_001143806|BDNF|627|brain-derived neurotrophic factor##NM_170732|BDNF|627|brain-derived neurotrophic factor##EF689021|BDNF|627|brain-derived neurotrophic factor##NM_170731|BDNF|627|brain-derived neurotrophic factor	0.364015	CTCF.p2:-18:0.364
chr2	62126080	62126187	reg1024871.p1	6.350	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-10347	-	TSC_hg19_v1_chr2_-_62115733 BC106933 BC106934 AF026291	-10399	-	AK129860 TSC_hg19_v1_chr2_-_62115719 AK295330	-10415	-	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	6696	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	297133	+	BC047439 AK091902 AX747245 NM_198276	607406	-	AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106933|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106934|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AF026291|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK129860|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK295330|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17	0.643399	CTCF.p2:5:0.643
chr11	34587115	34587240	reg1025164.p1	6.349	+	AK075197 AK290808 TSC_hg19_v1_chr11_-_34535310 AK074633 AF115403 AF049703 BC029743 AK312537 NM_001243080 NM_001422 DQ123839	-51851	-	AB528439 AK290817 AF115402 NM_001243081 NM_198381	-53946	-	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	-126628	+	NM_001206615 NM_012153 TSC_hg19_v1_chr11_+_34642639	55436	+	TSC_hg19_v1_chr11_+_34642661 AF212848 AF203977 AF170583 AF124438 AF124439	55489	+	AK310867 NM_001206616	66833	+	AK075197|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK290808|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK074633|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115403|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF049703|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##BC029743|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK312537|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243080|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001422|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##DQ123839|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AK290817|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AF115402|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_001243081|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##NM_198381|ELF5|2001|E74-like factor 5 (ets domain transcription factor)##AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase##NM_001206615|EHF|26298|ets homologous factor##NM_012153|EHF|26298|ets homologous factor##AF212848|EHF|26298|ets homologous factor##AF203977|EHF|26298|ets homologous factor##AF170583|EHF|26298|ets homologous factor##AF124438|EHF|26298|ets homologous factor##AF124439|EHF|26298|ets homologous factor##AK310867|EHF|26298|ets homologous factor##NM_001206616|EHF|26298|ets homologous factor	0.099876	
chr14	74958698	74958806	reg1022562.p1	6.349	+	NM_001105579	-65948	-	BC053325 AK023213 TSC_hg19_v1_chr14_+_74815209 AK001673	-143550	+	NM_018228 TSC_hg19_v1_chr14_+_74815173	-143583	+	CU678022 DQ891907 DQ895093 X67698 AK298975 TSC_hg19_v1_chr14_-_74959988	1234	-	AK222474 TSC_hg19_v1_chr14_-_74960013 AK300879	1262	-	TSC_hg19_v1_chr14_-_74960037 AK311931 BC002532 NM_006432	1307	-	NM_001105579|SYNDIG1L|646658|synapse differentiation inducing 1-like##BC053325|VRTN|55237|vertebrae development homolog (pig)##AK023213|VRTN|55237|vertebrae development homolog (pig)##AK001673|VRTN|55237|vertebrae development homolog (pig)##NM_018228|VRTN|55237|vertebrae development homolog (pig)##DQ891907|NPC2|10577|Niemann-Pick disease, type C2##DQ895093|NPC2|10577|Niemann-Pick disease, type C2##X67698|NPC2|10577|Niemann-Pick disease, type C2##AK298975|NPC2|10577|Niemann-Pick disease, type C2##AK222474|NPC2|10577|Niemann-Pick disease, type C2##AK300879|NPC2|10577|Niemann-Pick disease, type C2##AK311931|NPC2|10577|Niemann-Pick disease, type C2##BC002532|NPC2|10577|Niemann-Pick disease, type C2##NM_006432|NPC2|10577|Niemann-Pick disease, type C2	0.029516	
chr17	48772588	48772713	reg1024252.p1	6.349	+	TSC_hg19_v1_chr17_+_48712188 BC046126 NM_001144070 NM_003786 AF009670 Y17151 BC058907 AF085690 AF085691 AF085692 BC104952 BC137347 BC137348 AB208954 AF083552 AB010887 BC050370 AF104943 AB384796	-60441	+	TSC_hg19_v1_chr17_+_48638339 BC110995 AF124351 NM_018896 NM_198376 NM_198377 NM_198378 NM_198379 NM_198380 NM_198382 NM_198383 NM_198384 NM_198385 NM_198386 NM_198387 NM_198388 NM_198396 NM_198397	-134257	+	AK092731 TSC_hg19_v1_chr17_+_48624553 BC111029 AK025000 AK225189 AK291805 BC025255 NM_022827 BC065526 AK308616	-148092	+	AK314010 CR627413 TSC_hg19_v1_chr17_-_48785180 BC012978 EU164539 NM_052855	12493	-	TSC_hg19_v1_chr17_+_48796963 NM_006107 NM_016424 AK290540 AK225980 AK023672 BC047043 BC056409 BC002925 AK295983 DQ013876 AK001925	24343	+	AF147357 TSC_hg19_v1_chr17_+_48821111	48460	+	BC046126|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_001144070|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_003786|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF009670|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##Y17151|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC058907|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085690|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085691|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085692|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC104952|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137347|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137348|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB208954|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF083552|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB010887|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC050370|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF104943|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##AK092731|SPATA20|64847|spermatogenesis associated 20##BC111029|SPATA20|64847|spermatogenesis associated 20##AK025000|SPATA20|64847|spermatogenesis associated 20##AK225189|SPATA20|64847|spermatogenesis associated 20##AK291805|SPATA20|64847|spermatogenesis associated 20##BC025255|SPATA20|64847|spermatogenesis associated 20##NM_022827|SPATA20|64847|spermatogenesis associated 20##BC065526|SPATA20|64847|spermatogenesis associated 20##AK308616|SPATA20|64847|spermatogenesis associated 20##AK314010|ANKRD40|91369|ankyrin repeat domain 40##CR627413|ANKRD40|91369|ankyrin repeat domain 40##BC012978|ANKRD40|91369|ankyrin repeat domain 40##EU164539|ANKRD40|91369|ankyrin repeat domain 40##NM_052855|ANKRD40|91369|ankyrin repeat domain 40##NM_006107|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_016424|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK290540|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK225980|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK023672|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC047043|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC056409|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC002925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK295983|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##DQ013876|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK001925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)	0.806864	CTCF.p2:-14:0.807
chr4	21471211	21471314	reg1023021.p1	6.349	+	AY118170 DQ148489 NM_147183 AK290998	-165693	-	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	-485633	-	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	-769195	+	DQ148491 NM_001035004	75016	-	BX648990 DQ148490 NM_001035003	228055	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	479122	-	AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148491|KCNIP4|80333|Kv channel interacting protein 4##NM_001035004|KCNIP4|80333|Kv channel interacting protein 4##BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##NM_147182|KCNIP4|80333|Kv channel interacting protein 4	0.163559	
chr5	131470224	131470327	reg1021120.p1	6.349	+	M11220 NM_000758 BC113924 BC113999 BC108724 M11734 M10663 AY720441 AB591004 AF510855	-60750	+	M20137 NM_000588 BC069472 BC066272 BC066273 BC066274 BC066275 BC066276 M17115 M14743 CU686832 HQ448457	-73903	+	AK314452 BC047453 NM_001205248 NM_001205251 BC026161 NM_001205250 DQ655980	-122582	-	NM_001017973 NM_004199 BC017062	92668	-	TSC_hg19_v1_chr5_-_131563545 AY358970 BC025960 BC035813 BX647924 NM_001017974 NM_001142598 NM_001142599	93243	-	TSC_hg19_v1_chr5_+_131593340 BC016765 NM_001131027 NM_003687 AF154335	123078	+	M11220|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_000758|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113924|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113999|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC108724|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M11734|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M10663|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AY720441|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AF510855|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M20137|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##NM_000588|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC069472|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066272|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066273|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066274|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066275|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066276|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M17115|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M14743|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##HQ448457|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##AK314452|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC047453|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205248|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205251|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC026161|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205250|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##DQ655980|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001017973|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_004199|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC017062|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##AY358970|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC025960|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC035813|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BX647924|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001017974|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142598|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142599|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC016765|PDLIM4|8572|PDZ and LIM domain 4##NM_001131027|PDLIM4|8572|PDZ and LIM domain 4##NM_003687|PDLIM4|8572|PDZ and LIM domain 4##AF154335|PDLIM4|8572|PDZ and LIM domain 4	0.964638	CTCF.p2:-4:0.965
chr7	79648593	79648720	reg1022356.p1	6.349	+	TSC_hg19_v1_chr7_+_79083303 AK311103	-565499	+	AB014605 BC150277 AK297353 AF038563 NM_012301	-565777	-	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-2179147	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	115483	+	NM_001102386 BC147016 BC147017	492626	-	NM_001001547 AK129899 AK300101 AK312920	582865	+	AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##NM_001102386|GNAT3|346562|guanine nucleotide binding protein, alpha transducing 3##BC147016|GNAT3|346562|guanine nucleotide binding protein, alpha transducing 3##BC147017|GNAT3|346562|guanine nucleotide binding protein, alpha transducing 3##NM_001001547|CD36|948|CD36 molecule (thrombospondin receptor)##AK129899|CD36|948|CD36 molecule (thrombospondin receptor)##AK300101|CD36|948|CD36 molecule (thrombospondin receptor)##AK312920|CD36|948|CD36 molecule (thrombospondin receptor)	0.999599	CTCF.p2:21:1.000
chr8	101571989	101572106	reg1020082.p1	6.348	+	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	-107	-	TSC_hg19_v1_chr8_-_101322306 NM_183419	-249762	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-249866	-	AK093906 AX748361 NM_152628	89845	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	161759	-	AK095194 AK298990 TSC_hg19_v1_chr8_-_101734267	162174	-	BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK095194|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK298990|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.921409	CTCF.p2:28:0.921
chrX	11399699	11399826	reg1021223.p1	6.348	+	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	-88220	+	AF177663 NM_013423 AK297713	-115654	-	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	-270293	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	284058	-	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	376581	+	NM_001193270 AK300814	376955	+	AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase##AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	0.948798	CTCF.p2:9:0.949
chr21	26686318	26686424	reg1022314.p1	6.347	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-885303	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-4315598	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-4315681	+	TSC_hg19_v1_chr21_+_26934442 AF402776	248101	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	293444	-	NM_021219 TSC_hg19_v1_chr21_+_27011719	325282	+	AK124194|FLJ42200|400860|FLJ42200 protein##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##NM_021219|JAM2|58494|junctional adhesion molecule 2	0.990873	CTCF.p2:19:0.991
chr7	12498300	12498395	reg1021631.p1	6.347	+	NM_001135924	-54496	-	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	-54815	-	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	-247422	+	AB067492 NM_001112706 AK290363 AK075123 TSC_hg19_v1_chr7_+_12610346 BC021090 AB590413 DQ892033 DQ895224 AF276507	111960	+	AK027778 NM_033128	130800	+	TSC_hg19_v1_chr7_+_12726499 NM_001037164 NM_212460 BC039123 BC001111 BC003027	228139	+	NM_001135924|VWDE|221806|von Willebrand factor D and EGF domains##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains##NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AB067492|SCIN|85477|scinderin##NM_001112706|SCIN|85477|scinderin##AK290363|SCIN|85477|scinderin##AK075123|SCIN|85477|scinderin##BC021090|SCIN|85477|scinderin##DQ892033|SCIN|85477|scinderin##DQ895224|SCIN|85477|scinderin##AF276507|SCIN|85477|scinderin##AK027778|SCIN|85477|scinderin##NM_033128|SCIN|85477|scinderin##NM_001037164|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_212460|ARL4A|10124|ADP-ribosylation factor-like 4A##BC039123|ARL4A|10124|ADP-ribosylation factor-like 4A##BC001111|ARL4A|10124|ADP-ribosylation factor-like 4A##BC003027|ARL4A|10124|ADP-ribosylation factor-like 4A	0.0	
chr8	94577772	94577887	reg1021580.p1	6.347	+	BC089453 NM_001242668	-398751	-	NM_001191035 TSC_hg19_v1_chr8_-_93978373 BC031029 AK097956 BC110326 DQ351291 NM_001171795 NM_001171796 NM_001171797 NM_001171798 NM_001171799	-599507	-	AK096398 NM_001191036	-600064	-	BC037909 TSC_hg19_v1_chr8_-_94712710	134857	-	BC014598 TSC_hg19_v1_chr8_+_94712788 BC108707 NM_145269 CR627475 DQ327715 DQ327716 AK096298 CU677061	134975	+	BC039260 TSC_hg19_v1_chr8_-_94753192	175362	-	BC089453|LOC389676|389676|uncharacterized LOC389676##NM_001242668|LOC389676|389676|uncharacterized LOC389676##NM_001191035|C8orf83|286144|chromosome 8 open reading frame 83##BC031029|C8orf83|286144|chromosome 8 open reading frame 83##AK097956|C8orf83|286144|chromosome 8 open reading frame 83##BC110326|C8orf83|286144|chromosome 8 open reading frame 83##DQ351291|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171795|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171796|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171797|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171798|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171799|C8orf83|286144|chromosome 8 open reading frame 83##AK096398|C8orf83|286144|chromosome 8 open reading frame 83##NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83##BC037909|LOC642924|642924|uncharacterized LOC642924##BC014598|FAM92A1|137392|family with sequence similarity 92, member A1##BC108707|FAM92A1|137392|family with sequence similarity 92, member A1##NM_145269|FAM92A1|137392|family with sequence similarity 92, member A1##CR627475|FAM92A1|137392|family with sequence similarity 92, member A1##DQ327715|FAM92A1|137392|family with sequence similarity 92, member A1##DQ327716|FAM92A1|137392|family with sequence similarity 92, member A1##AK096298|FAM92A1|137392|family with sequence similarity 92, member A1##BC039260|RBM12B|389677|RNA binding motif protein 12B	0.841632	CTCF.p2:22:0.842
chr1	185207726	185207827	reg1022945.p1	6.346	+	TSC_hg19_v1_chr1_+_185126418 AK291443	-81380	+	NM_001105518 AK127980 TSC_hg19_v1_chr1_+_185126298 BC030781 NM_017673 AK315802	-81506	+	AK302166 TSC_hg19_v1_chr1_-_185126203 NM_001202423	-81585	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	78543	-	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	78694	-	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	495800	+	AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##NM_001105518|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK127980|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##BC030781|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##NM_017673|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK315802|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK302166|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##NM_001202423|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1	0.078498	
chr19	43434392	43434490	reg1018721.p1	6.346	+	CU676604 DQ893114 DQ896388 M31125 M33666 NM_002782 X17098 BC020652 NM_001031850	-12448	-	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	-50616	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	-164617	-	BC136401 U18467 BC030979 AK309898 NM_001206650 NM_002783	6848	-	CU676656 M69245 U25988 BC020711 NM_001113410 NM_002785 NM_203287	96145	-	DQ891359 EU832659 EU832736 M20882 AK002132 BC022316 NM_031246	152366	-	DQ893114|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##DQ896388|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M31125|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M33666|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_002782|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##X17098|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC020652|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_001031850|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC136401|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##U18467|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##BC030979|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_001206650|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_002783|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##M69245|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##U25988|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##BC020711|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_001113410|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_002785|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_203287|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##DQ891359|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832659|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832736|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M20882|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##BC022316|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##NM_031246|PSG2|5670|pregnancy specific beta-1-glycoprotein 2	0.992713	CTCF.p2:13:0.993
chr2	207421211	207421352	reg1023271.p1	6.346	+	AK129906 TSC_hg19_v1_chr2_+_207406857	-14445	+	TSC_hg19_v1_chr2_+_207308286 AB009672 NM_003812 BC132763 BC132765	-112948	+	TSC_hg19_v1_chr2_+_207139414 AK127271 NM_020923	-281814	+	NM_001102659	85860	+	DQ516347 NM_001093730	161838	-	AK292386 BC033509 BC088356 AK302250 AK309144 NM_001039845 AK308257	208749	-	AK129906|ADAM23|8745|ADAM metallopeptidase domain 23##AB009672|ADAM23|8745|ADAM metallopeptidase domain 23##NM_003812|ADAM23|8745|ADAM metallopeptidase domain 23##BC132763|ADAM23|8745|ADAM metallopeptidase domain 23##BC132765|ADAM23|8745|ADAM metallopeptidase domain 23##AK127271|ZDBF2|57683|zinc finger, DBF-type containing 2##NM_020923|ZDBF2|57683|zinc finger, DBF-type containing 2##NM_001102659|LOC200726|200726|hCG1657980##DQ516347|DYTN|391475|dystrotelin##NM_001093730|DYTN|391475|dystrotelin##AK292386|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##BC033509|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##BC088356|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK302250|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK309144|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##NM_001039845|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)##AK308257|MDH1B|130752|malate dehydrogenase 1B, NAD (soluble)	0.951775	CTCF.p2:-9:0.914
chr9	79018326	79018483	reg1021849.p1	6.346	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	-9013	-	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	-512769	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	-1314894	+	AY196293 NM_001097634	38177	+	NM_001097633 NM_001490 TSC_hg19_v1_chr9_+_79074142 AY196294 AY196295 AL832647	55712	+	AY196296 NM_001097635	74852	+	BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1##AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097633|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001490|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196294|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196295|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AL832647|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.178628	
chr1	235012762	235012864	reg1021934.p2	6.345	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-117039	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-267567	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-268955	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	279276	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	279418	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	311750	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr14	91821414	91821511	reg1022275.p1	6.345	+	BC098567 NM_003485	-101268	-	BC128536 NM_001177676	-110611	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-240435	+	TSC_hg19_v1_chr14_-_91884159 AF070587	62686	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	62713	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	155038	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.754446	CTCF.p2:6:0.754
chr4	74174076	74174194	reg1022156.p2	6.345	+	TSC_hg19_v1_chr4_-_74124513 BC043394 BC004173 AF308285 NM_032217 NM_198889 AK307581	-49650	-	TSC_hg19_v1_chr4_-_74124365 AB527094	-49776	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	-85356	-	NM_000477 TSC_hg19_v1_chr4_+_74270005 AK292755 AK298461 AK308044 AK314794 BC034023 BC035969 BC036003 BC041789 AK298437 BC034026 BC039235 CR749331 V00494 AF542069 AY960291 AY358313 DQ986150 AY544124 AY550967 DQ891414 DQ894588 AF190168 AY728024 CU690238	95872	+	HQ537426 TSC_hg19_v1_chr4_+_74270841	96702	+	TSC_hg19_v1_chr4_+_74281884 BC014308	107810	+	BC043394|ANKRD17|26057|ankyrin repeat domain 17##BC004173|ANKRD17|26057|ankyrin repeat domain 17##AF308285|ANKRD17|26057|ankyrin repeat domain 17##NM_032217|ANKRD17|26057|ankyrin repeat domain 17##NM_198889|ANKRD17|26057|ankyrin repeat domain 17##AK307581|ANKRD17|26057|ankyrin repeat domain 17##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17##NM_000477|ALB|213|albumin##AK292755|ALB|213|albumin##AK298461|ALB|213|albumin##AK308044|ALB|213|albumin##AK314794|ALB|213|albumin##BC034023|ALB|213|albumin##BC035969|ALB|213|albumin##BC036003|ALB|213|albumin##BC041789|ALB|213|albumin##AK298437|ALB|213|albumin##BC034026|ALB|213|albumin##BC039235|ALB|213|albumin##CR749331|ALB|213|albumin##V00494|ALB|213|albumin##AF542069|ALB|213|albumin##AY960291|ALB|213|albumin##AY358313|ALB|213|albumin##DQ986150|ALB|213|albumin##AY544124|ALB|213|albumin##AY550967|ALB|213|albumin##DQ891414|ALB|213|albumin##DQ894588|ALB|213|albumin##AF190168|ALB|213|albumin##AY728024|ALB|213|albumin##HQ537426|ALB|213|albumin##BC014308|ALB|213|albumin	0.11388	
chr16	76673972	76674080	reg1019811.p1	6.344	+	NM_138994 AK057327 BC017266	-330271	+	AB051550 NM_033401 TSC_hg19_v1_chr16_+_76311298	-362786	+	AK307901 NM_018975 TSC_hg19_v1_chr16_+_75681715 AK000669 BC022428 BC004465 BC005841 BC016739 BC078171 AF289599 AF250393 AB464292 CU678732 AF262988	-992319	+	TSC_hg19_v1_chr16_+_77224857 BC024277 NM_014940	550816	+	AK023374 TSC_hg19_v1_chr16_+_77224865	550859	+	TSC_hg19_v1_chr16_+_77225092 AK023896 AK296467	551048	+	NM_138994|CNTNAP4|85445|contactin associated protein-like 4##AK057327|CNTNAP4|85445|contactin associated protein-like 4##BC017266|CNTNAP4|85445|contactin associated protein-like 4##AB051550|CNTNAP4|85445|contactin associated protein-like 4##NM_033401|CNTNAP4|85445|contactin associated protein-like 4##AK307901|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##NM_018975|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AK000669|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC022428|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC004465|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC005841|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC016739|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC078171|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF289599|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF250393|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF262988|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC024277|MON1B|22879|MON1 homolog B (yeast)##NM_014940|MON1B|22879|MON1 homolog B (yeast)##AK023374|MON1B|22879|MON1 homolog B (yeast)##AK023896|MON1B|22879|MON1 homolog B (yeast)##AK296467|MON1B|22879|MON1 homolog B (yeast)	0.976786	CTCF.p2:13:0.977
chr17	45439694	45439785	reg1022014.p1	6.344	+	TSC_hg19_v1_chr17_+_45401357 NM_001195192 NM_152347 BC036407 BC037876	-38407	+	BC044604 TSC_hg19_v1_chr17_+_45401141	-38598	+	TSC_hg19_v1_chr17_+_45331260 AK300424	-108481	+	TSC_hg19_v1_chr17_-_45569837 BC090855 BC067758	130105	-	NM_006310 TSC_hg19_v1_chr17_+_45608460	168714	+	TSC_hg19_v1_chr17_+_45608556 AK096709	168833	+	NM_001195192|C17orf57|124989|chromosome 17 open reading frame 57##NM_152347|C17orf57|124989|chromosome 17 open reading frame 57##BC036407|C17orf57|124989|chromosome 17 open reading frame 57##BC037876|C17orf57|124989|chromosome 17 open reading frame 57##BC044604|C17orf57|124989|chromosome 17 open reading frame 57##BC090855|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2##BC067758|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2##NM_006310|NPEPPS|9520|aminopeptidase puromycin sensitive##AK096709|NPEPPS|9520|aminopeptidase puromycin sensitive	0.830069	CTCF.p2:-2:0.830
chr19	51308000	51308180	reg1019944.p2	6.344	+	TSC_hg19_v1_chr19_-_51307892 NM_199250 NM_199249	-171	-	AB463389 NM_033068	-14419	+	BC095544 BC067453 BC067454 NM_001506	-34302	+	BT007253 S77952 DQ893072 DQ896328 AY703451 BC005313 M25629 X13561 AK293363 AY429508 NM_002257	18932	-	AY373373 AY373374 CU686842 CU686864 HQ258133 BC126137 BC144045 BC144046 BC144047 AF303046 BC069480 BC069507 BC069518 NM_017509 NM_138563 NM_138564	26672	-	AF335477 AF335478 AX772834 AX772836 BC005307 NM_001030047 NM_001030048 NM_001030050 NM_001648 S75755 U17040 X05332 BC056665 AJ310937 AJ459784 AJ310938 AK311887 AK312933 AJ459782 AJ459783 AJ512346 M26663 DQ890670 DQ893851 AB463810 CU690730 BT019862 M21895 M21896 M21897	50106	+	NM_199250|C19orf48|84798|chromosome 19 open reading frame 48##NM_199249|C19orf48|84798|chromosome 19 open reading frame 48##NM_033068|ACPT|93650|acid phosphatase, testicular##BC095544|GPR32|2854|G protein-coupled receptor 32##BC067453|GPR32|2854|G protein-coupled receptor 32##BC067454|GPR32|2854|G protein-coupled receptor 32##NM_001506|GPR32|2854|G protein-coupled receptor 32##BT007253|KLK1|3816|kallikrein 1##S77952|KLK1|3816|kallikrein 1##DQ893072|KLK1|3816|kallikrein 1##DQ896328|KLK1|3816|kallikrein 1##AY703451|KLK1|3816|kallikrein 1##BC005313|KLK1|3816|kallikrein 1##M25629|KLK1|3816|kallikrein 1##X13561|KLK1|3816|kallikrein 1##AY429508|KLK1|3816|kallikrein 1##NM_002257|KLK1|3816|kallikrein 1##AY373373|KLK15|55554|kallikrein-related peptidase 15##AY373374|KLK15|55554|kallikrein-related peptidase 15##HQ258133|KLK15|55554|kallikrein-related peptidase 15##BC126137|KLK15|55554|kallikrein-related peptidase 15##BC144045|KLK15|55554|kallikrein-related peptidase 15##BC144046|KLK15|55554|kallikrein-related peptidase 15##BC144047|KLK15|55554|kallikrein-related peptidase 15##AF303046|KLK15|55554|kallikrein-related peptidase 15##BC069480|KLK15|55554|kallikrein-related peptidase 15##BC069507|KLK15|55554|kallikrein-related peptidase 15##BC069518|KLK15|55554|kallikrein-related peptidase 15##NM_017509|KLK15|55554|kallikrein-related peptidase 15##NM_138563|KLK15|55554|kallikrein-related peptidase 15##NM_138564|KLK15|55554|kallikrein-related peptidase 15##AF335477|KLK3|354|kallikrein-related peptidase 3##AF335478|KLK3|354|kallikrein-related peptidase 3##AX772834|KLK3|354|kallikrein-related peptidase 3##BC005307|KLK3|354|kallikrein-related peptidase 3##NM_001030047|KLK3|354|kallikrein-related peptidase 3##NM_001030048|KLK3|354|kallikrein-related peptidase 3##NM_001030050|KLK3|354|kallikrein-related peptidase 3##NM_001648|KLK3|354|kallikrein-related peptidase 3##S75755|KLK3|354|kallikrein-related peptidase 3##U17040|KLK3|354|kallikrein-related peptidase 3##X05332|KLK3|354|kallikrein-related peptidase 3##BC056665|KLK3|354|kallikrein-related peptidase 3##AJ310937|KLK3|354|kallikrein-related peptidase 3##AJ459784|KLK3|354|kallikrein-related peptidase 3##AJ310938|KLK3|354|kallikrein-related peptidase 3##AK312933|KLK3|354|kallikrein-related peptidase 3##AJ459782|KLK3|354|kallikrein-related peptidase 3##AJ459783|KLK3|354|kallikrein-related peptidase 3##AJ512346|KLK3|354|kallikrein-related peptidase 3##M26663|KLK3|354|kallikrein-related peptidase 3##DQ890670|KLK3|354|kallikrein-related peptidase 3##DQ893851|KLK3|354|kallikrein-related peptidase 3##BT019862|KLK3|354|kallikrein-related peptidase 3##M21895|KLK3|354|kallikrein-related peptidase 3##M21896|KLK3|354|kallikrein-related peptidase 3##M21897|KLK3|354|kallikrein-related peptidase 3	0.0	
chr1	98933823	98933921	reg1021966.p1	6.344	+	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	-547266	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	-547313	-	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	-547383	-	TSC_hg19_v1_chr1_+_99127278 NM_015976 NM_152238 AK025031 AK223229 AL049989 AF121857 AK298211 BC018105 BC010349	193436	+	BC040174 AK295688 BC140086 BC143086 AY634620 BC136350 BC144000 AY574039 FJ472844 NM_001010861 NM_001037317	536440	-	AF541281 NM_001166252 NM_014839 AB007924 AK056665 AY304518 AB384482 BC042963 TSC_hg19_v1_chr1_+_99730047 AK291369 AK297417	796078	+	NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##NM_015976|SNX7|51375|sorting nexin 7##NM_152238|SNX7|51375|sorting nexin 7##AK025031|SNX7|51375|sorting nexin 7##AK223229|SNX7|51375|sorting nexin 7##AL049989|SNX7|51375|sorting nexin 7##AF121857|SNX7|51375|sorting nexin 7##AK298211|SNX7|51375|sorting nexin 7##BC018105|SNX7|51375|sorting nexin 7##BC010349|SNX7|51375|sorting nexin 7##BC040174|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AK295688|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC140086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC143086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY634620|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC136350|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC144000|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY574039|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##FJ472844|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001010861|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001037317|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	0.829442	CTCF.p2:0:0.829
chr9	85814303	85814409	reg1021488.p1	6.344	+	BC023566 NM_152573 TSC_hg19_v1_chr9_-_85678058 AK056176	-136290	-	AK290986 TSC_hg19_v1_chr9_-_85677861	-136531	-	AK128831 NM_001001670	-1210670	+	GQ129452 BC023560 NM_001244962	67791	-	BC037253 NM_001244961	132519	-	NM_001244960 AY137774	268303	-	BC023566|RASEF|158158|RAS and EF-hand domain containing##NM_152573|RASEF|158158|RAS and EF-hand domain containing##AK056176|RASEF|158158|RAS and EF-hand domain containing##AK290986|RASEF|158158|RAS and EF-hand domain containing##AK128831|FAM75D1|389763|family with sequence similarity 75, member D1##NM_001001670|FAM75D1|389763|family with sequence similarity 75, member D1##GQ129452|FRMD3|257019|FERM domain containing 3##BC023560|FRMD3|257019|FERM domain containing 3##NM_001244962|FRMD3|257019|FERM domain containing 3##BC037253|FRMD3|257019|FERM domain containing 3##NM_001244961|FRMD3|257019|FERM domain containing 3##NM_001244960|FRMD3|257019|FERM domain containing 3##AY137774|FRMD3|257019|FERM domain containing 3	0.612684	CTCF.p2:10:0.613
chrX	12969104	12969233	reg1020625.p1	6.344	+	AK314240 NM_138636 AF246971 AY358296 BC101074 BC101075 BC101076 BC101077 AF245703	-44411	+	AK313858 BC033651 NM_016562 AF240467 AF245702	-83970	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	-159600	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	24072	+	TSC_hg19_v1_chrX_+_12994293 BC104464 BC104465 BT007090 X02493	25175	+	BX647580 AK313776 AF494345 BX648111 BX648919 NM_174901	93650	-	AK314240|TLR8|51311|toll-like receptor 8##NM_138636|TLR8|51311|toll-like receptor 8##AF246971|TLR8|51311|toll-like receptor 8##AY358296|TLR8|51311|toll-like receptor 8##BC101074|TLR8|51311|toll-like receptor 8##BC101075|TLR8|51311|toll-like receptor 8##BC101076|TLR8|51311|toll-like receptor 8##BC101077|TLR8|51311|toll-like receptor 8##AF245703|TLR8|51311|toll-like receptor 8##AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked##BC104464|TMSB4X|7114|thymosin beta 4, X-linked##BC104465|TMSB4X|7114|thymosin beta 4, X-linked##BT007090|TMSB4X|7114|thymosin beta 4, X-linked##X02493|TMSB4X|7114|thymosin beta 4, X-linked##BX647580|FAM9C|171484|family with sequence similarity 9, member C##AK313776|FAM9C|171484|family with sequence similarity 9, member C##AF494345|FAM9C|171484|family with sequence similarity 9, member C##BX648111|FAM9C|171484|family with sequence similarity 9, member C##BX648919|FAM9C|171484|family with sequence similarity 9, member C##NM_174901|FAM9C|171484|family with sequence similarity 9, member C	0.403622	CTCF.p2:1:0.404
chr1	1711919	1712075	reg1019607.p1	6.342	+	TSC_hg19_v1_chr1_-_1711471 AF250320 NM_001198994	-517	-	BC001709 TSC_hg19_v1_chr1_-_1710295 AK291599 NM_001198993	-1728	-	TSC_hg19_v1_chr1_-_1709864 AK291728 AK290161 AK023114 NM_023018	-2111	-	TSC_hg19_v1_chr1_-_1822437 BC004186 X04526 AK295607 BC140714 BC171773	110455	-	TSC_hg19_v1_chr1_-_1822496 BC008991	110498	-	AK312614 TSC_hg19_v1_chr1_-_1822502	110505	-	AF250320|NADK|65220|NAD kinase##NM_001198994|NADK|65220|NAD kinase##BC001709|NADK|65220|NAD kinase##AK291599|NADK|65220|NAD kinase##NM_001198993|NADK|65220|NAD kinase##AK291728|NADK|65220|NAD kinase##AK290161|NADK|65220|NAD kinase##AK023114|NADK|65220|NAD kinase##NM_023018|NADK|65220|NAD kinase##BC004186|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##X04526|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##BC140714|CDK11B|984|cyclin-dependent kinase 11B##BC171773|CDK11B|984|cyclin-dependent kinase 11B##BC008991|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##AK312614|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1	0.0	
chr1	24018101	24018257	reg1020566.p1	6.342	+	NM_002167 X69111	-131895	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	-132195	-	L22846 NM_004091	-160468	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	101	+	TSC_hg19_v1_chr1_+_24018295 BC018970	120	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	51725	+	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11##BC018970|RPL11|6135|ribosomal protein L11##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)	0.011506	
chr7	102152333	102152458	reg1025606.p1	6.342	+	DQ893151 DQ896446 TSC_hg19_v1_chr7_-_102119367 X98433 BC040116 BC024165 BC141830 BC139902 BC065711 L37127 X82385 AK290515 NM_006234	-33052	-	TSC_hg19_v1_chr7_+_102105459 AB209379 CU688900	-46903	+	TSC_hg19_v1_chr7_+_102105430 AL133057 BC030547 NM_152892 AK290967 AK313771	-46987	+	AK302217 NM_001031618 NM_001166339	39283	+	AJ277739 AJ277740 AJ277741 AB384935 BC056864 BC071870 TSC_hg19_v1_chr7_-_102212997 BC044209 BC050598	60592	-	AF468111 BC110985 TSC_hg19_v1_chr7_-_102213031 AB209398 BC141857 AK309487 NM_001097615	60645	-	DQ893151|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##DQ896446|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X98433|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC040116|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC024165|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC141830|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC139902|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC065711|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##L37127|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X82385|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AK290515|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##NM_006234|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AB209379|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AL133057|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##BC030547|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##NM_152892|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK290967|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK313771|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##AJ277739|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AJ277740|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277741|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AF468111|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AB209398|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_001097615|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3	0.0	
chr13	44817502	44817682	reg1023542.p1	6.341	+	AK096044 NM_153218 TSC_hg19_v1_chr13_+_44453986 BC035749	-363586	+	NM_144974 AK056408	-363767	-	NM_001128303	-364173	+	BC029067 NM_001010897 TSC_hg19_v1_chr13_+_44947983	130390	+	U35048 TSC_hg19_v1_chr13_-_45010962 AJ222700 BC105277 BC069207	193360	-	BC146664 BC146679 TSC_hg19_v1_chr13_-_45010983 BC000456 BC016867	193387	-	AK096044|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_153218|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC035749|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC029067|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##NM_001010897|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##U35048|TSC22D1|8848|TSC22 domain family, member 1##AJ222700|TSC22D1|8848|TSC22 domain family, member 1##BC105277|TSC22D1|8848|TSC22 domain family, member 1##BC069207|TSC22D1|8848|TSC22 domain family, member 1##BC146664|TSC22D1|8848|TSC22 domain family, member 1##BC146679|TSC22D1|8848|TSC22 domain family, member 1##BC000456|TSC22D1|8848|TSC22 domain family, member 1##BC016867|TSC22D1|8848|TSC22 domain family, member 1	0.024711	
chr3	45957416	45957596	reg1018503.p2	6.341	+	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	-29451	+	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	-73911	-	TSC_hg19_v1_chr3_-_45838112 AF125107	-119358	-	NM_006564 Y13248	27466	+	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	79815	-	AB189434 AB189435 NM_001024644 NM_005283	111472	-	NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1	0.0	
chr10	37189128	37189230	reg1022694.p1	6.340	+	AB587328 AB043703 NM_031866	-1258820	-	AK074504 NM_153368	-1294842	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	-1563385	+	AF269087 NM_052997	225605	+	NM_001190489	702679	-	BC132915 BC132917 BC110869 BC021819 AJ491695 AJ492196 NM_021045 TSC_hg19_v1_chr10_-_38146539	957239	-	AB043703|FZD8|8325|frizzled family receptor 8##NM_031866|FZD8|8325|frizzled family receptor 8##AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AF269087|ANKRD30A|91074|ankyrin repeat domain 30A##NM_052997|ANKRD30A|91074|ankyrin repeat domain 30A##NM_001190489|MTRNR2L7|100288485|MT-RNR2-like 7##BC132915|ZNF248|57209|zinc finger protein 248##BC132917|ZNF248|57209|zinc finger protein 248##BC110869|ZNF248|57209|zinc finger protein 248##BC021819|ZNF248|57209|zinc finger protein 248##AJ491695|ZNF248|57209|zinc finger protein 248##AJ492196|ZNF248|57209|zinc finger protein 248##NM_021045|ZNF248|57209|zinc finger protein 248	0.997648	CTCF.p2:-2:0.998
chr12	6672749	6672859	reg1019004.p1	6.340	+	TSC_hg19_v1_chr12_-_6665250 BC001790 BC010431 BC023664 BC110387 NM_001039670 NM_001193457 NM_080730	-7546	-	M36164 TSC_hg19_v1_chr12_+_6647482	-25387	+	TSC_hg19_v1_chr12_+_6643982 M17851 AY633612 BC023632 DQ891557 DQ894744 AB463693 CU679249 J02642 BT006893 CR407671	-28822	+	TSC_hg19_v1_chr12_-_6677453 BC000656 BC065257 AK129852 BC106072 BC082985 BC128183 BC128184 AK056208 AK307582 NM_001033714 NM_006170	4662	-	CR936680 EU446505 TSC_hg19_v1_chr12_-_6715604	42764	-	X86691 TSC_hg19_v1_chr12_-_6716523 BC014964 BC025962 BC038596	43697	-	BC001790|IFFO1|25900|intermediate filament family orphan 1##BC010431|IFFO1|25900|intermediate filament family orphan 1##BC023664|IFFO1|25900|intermediate filament family orphan 1##BC110387|IFFO1|25900|intermediate filament family orphan 1##NM_001039670|IFFO1|25900|intermediate filament family orphan 1##NM_001193457|IFFO1|25900|intermediate filament family orphan 1##NM_080730|IFFO1|25900|intermediate filament family orphan 1##M36164|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##M17851|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AY633612|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC023632|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##DQ891557|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##DQ894744|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##J02642|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BT006893|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##CR407671|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC000656|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC065257|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK129852|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC106072|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC082985|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC128183|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC128184|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK056208|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK307582|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##NM_001033714|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##NM_006170|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##CR936680|CHD4|1108|chromodomain helicase DNA binding protein 4##EU446505|CHD4|1108|chromodomain helicase DNA binding protein 4##X86691|CHD4|1108|chromodomain helicase DNA binding protein 4##BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4##BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4##BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4	0.999012	CTCF.p2:-3:0.999
chr2	20595911	20596009	reg1020717.p1	6.340	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-45541	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-68827	-	AF272350 TSC_hg19_v1_chr2_-_20512079	-83911	-	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	50872	+	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	254888	-	AF522369 NM_182828	270463	+	AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)##AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7	0.877529	CTCF.p2:-9:0.790
chrX	12516113	12516235	reg1022379.p1	6.340	+	AB002314 NM_014728 AK289694	-359584	+	NM_006800 AK025642	-738427	+	NM_001193270 AK300814	-739457	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	293323	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	293394	+	AK313858 BC033651 NM_016562 AF240467 AF245702	369024	+	AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7	0.578261	CTCF.p2:-33:0.578
chr19	6482042	6482173	reg1019760.p2	6.339	+	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-324	-	NM_139161 NM_174881 AK292956 AF503290 AY358684 BC018409 AK000653	-17823	+	AJ619962 AJ512835 AJ619988 AY750170 TSC_hg19_v1_chr19_-_6459804 BC001656 NM_024103	-22302	-	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	20210	-	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	48919	+	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	108925	-	AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##NM_139161|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_174881|CRB3|92359|crumbs homolog 3 (Drosophila)##AK292956|CRB3|92359|crumbs homolog 3 (Drosophila)##AF503290|CRB3|92359|crumbs homolog 3 (Drosophila)##AY358684|CRB3|92359|crumbs homolog 3 (Drosophila)##BC018409|CRB3|92359|crumbs homolog 3 (Drosophila)##AK000653|CRB3|92359|crumbs homolog 3 (Drosophila)##AJ619962|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##AJ512835|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##AJ619988|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##AY750170|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##BC001656|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##NM_024103|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BT007211|CD70|970|CD70 molecule	0.994972	CTCF.p2:5:0.995
chr5	89025942	89026065	reg1020609.p1	6.339	+	AL833268 AL833274 NM_001131005 NM_001193347	-826109	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-840739	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-840883	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	679536	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	744179	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	744575	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.884457	CTCF.p2:42:0.884
chr7	26726128	26726280	reg1019081.p1	6.339	+	AK093321 AX748054 NM_001145531	-48715	+	TSC_hg19_v1_chr7_+_26438248 AK056484	-287942	+	AK309162 NM_001199838	-322260	+	AF072166 AJ004886 AB528968 DQ892896 DQ896144 AB014486 TSC_hg19_v1_chr7_-_26904210 BC002893 AK222885 AK313209 BC036044 AF051323 NM_003930	177989	-	S79869 S79871 S79910 U37431 AB464569 CU689416 DQ890884 DQ894038 U10421 AK308067 BC032547 AK313514 NM_005522 NM_153620	409370	-	TSC_hg19_v1_chr7_+_27135786 BC031342	409581	+	AK093321|C7orf71|285941|chromosome 7 open reading frame 71##NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71##AK056484|LOC441204|441204|uncharacterized LOC441204##AK309162|SNX10|29887|sorting nexin 10##NM_001199838|SNX10|29887|sorting nexin 10##AF072166|SKAP2|8935|src kinase associated phosphoprotein 2##AJ004886|SKAP2|8935|src kinase associated phosphoprotein 2##DQ892896|SKAP2|8935|src kinase associated phosphoprotein 2##DQ896144|SKAP2|8935|src kinase associated phosphoprotein 2##AB014486|SKAP2|8935|src kinase associated phosphoprotein 2##BC002893|SKAP2|8935|src kinase associated phosphoprotein 2##AK222885|SKAP2|8935|src kinase associated phosphoprotein 2##AK313209|SKAP2|8935|src kinase associated phosphoprotein 2##BC036044|SKAP2|8935|src kinase associated phosphoprotein 2##AF051323|SKAP2|8935|src kinase associated phosphoprotein 2##NM_003930|SKAP2|8935|src kinase associated phosphoprotein 2##S79869|HOXA1|3198|homeobox A1##S79871|HOXA1|3198|homeobox A1##S79910|HOXA1|3198|homeobox A1##U37431|HOXA1|3198|homeobox A1##DQ890884|HOXA1|3198|homeobox A1##DQ894038|HOXA1|3198|homeobox A1##U10421|HOXA1|3198|homeobox A1##AK308067|HOXA1|3198|homeobox A1##BC032547|HOXA1|3198|homeobox A1##AK313514|HOXA1|3198|homeobox A1##NM_005522|HOXA1|3198|homeobox A1##NM_153620|HOXA1|3198|homeobox A1##BC031342|HOTAIRM1|100506311|HOXA transcript antisense RNA, myeloid-specific 1 (non-protein coding)	0.997922	CTCF.p2:-34:0.998
chr18	20426184	20426318	reg1026569.p1	6.338	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	-428426	-	X95701 BC027891 NM_005257 TSC_hg19_v1_chr18_+_19749549	-676775	+	AK123079 TSC_hg19_v1_chr18_-_19749029	-677265	-	TSC_hg19_v1_chr18_+_20513319 NM_002894 U72066 AK292481	87097	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	87564	+	EF028204 NM_001100619	289475	+	HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##X95701|GATA6|2627|GATA binding protein 6##BC027891|GATA6|2627|GATA binding protein 6##NM_005257|GATA6|2627|GATA binding protein 6##AK123079|LOC100128893|100128893|uncharacterized LOC100128893##NM_002894|RBBP8|5932|retinoblastoma binding protein 8##U72066|RBBP8|5932|retinoblastoma binding protein 8##AK292481|RBBP8|5932|retinoblastoma binding protein 8##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1	0.80451	CTCF.p2:0:0.805
chr2	165456613	165456723	reg1021554.p2	6.338	+	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	-31664	-	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	-864151	-	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-1761421	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	21225	-	TSC_hg19_v1_chr2_-_165477987 AK307744 AK313153	21325	-	L76687 NM_004490	21690	-	AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14##AK307744|GRB14|2888|growth factor receptor-bound protein 14##AK313153|GRB14|2888|growth factor receptor-bound protein 14##L76687|GRB14|2888|growth factor receptor-bound protein 14##NM_004490|GRB14|2888|growth factor receptor-bound protein 14	0.084486	
chr2	42329533	42329673	reg1019428.p2	6.338	+	AB528999 TSC_hg19_v1_chr2_+_42275979	-53642	+	TSC_hg19_v1_chr2_+_42275160 NM_138370	-54471	+	AK124893 NM_001242815	-148661	-	TSC_hg19_v1_chr2_+_42396514 AB275889 NM_001145076 NM_019063 AK314702 BC146799 AF177377 BC067777 BC104647 BC140845 AB374363 AB462412 AB384933	66972	+	AF127788 BT007371 CR542208 CU675543 DQ890566 DQ893729 TSC_hg19_v1_chr2_-_42588354 AB007618 BC005251 BC007095 NM_004718	258730	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	390955	-	NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_001145076|EML4|27436|echinoderm microtubule associated protein like 4##NM_019063|EML4|27436|echinoderm microtubule associated protein like 4##AK314702|EML4|27436|echinoderm microtubule associated protein like 4##BC146799|EML4|27436|echinoderm microtubule associated protein like 4##AF177377|EML4|27436|echinoderm microtubule associated protein like 4##BC067777|EML4|27436|echinoderm microtubule associated protein like 4##BC104647|EML4|27436|echinoderm microtubule associated protein like 4##BC140845|EML4|27436|echinoderm microtubule associated protein like 4##AF127788|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BT007371|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##CR542208|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ890566|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ893729|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB007618|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC005251|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC007095|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##NM_004718|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3	0.0	
chr3	10459626	10459771	reg1024679.p1	6.338	+	TSC_hg19_v1_chr3_-_10362861 NM_183352	-96845	-	AK294662 TSC_hg19_v1_chr3_-_10362797 BC091506 AK301999	-96900	-	AF052155 NM_001136232 TSC_hg19_v1_chr3_-_10362765 L09260 BC002634 AK223019 EF036494	-96951	-	TSC_hg19_v1_chr3_-_10547221 M97260	87535	-	AK308898 NM_001001331 NM_001683 TSC_hg19_v1_chr3_-_10547271	87571	-	AB210008 TSC_hg19_v1_chr3_-_10547352	87648	-	NM_183352|SEC13|6396|SEC13 homolog (S. cerevisiae)##AK294662|SEC13|6396|SEC13 homolog (S. cerevisiae)##BC091506|SEC13|6396|SEC13 homolog (S. cerevisiae)##AK301999|SEC13|6396|SEC13 homolog (S. cerevisiae)##AF052155|SEC13|6396|SEC13 homolog (S. cerevisiae)##NM_001136232|SEC13|6396|SEC13 homolog (S. cerevisiae)##L09260|SEC13|6396|SEC13 homolog (S. cerevisiae)##BC002634|SEC13|6396|SEC13 homolog (S. cerevisiae)##AK223019|SEC13|6396|SEC13 homolog (S. cerevisiae)##EF036494|SEC13|6396|SEC13 homolog (S. cerevisiae)##M97260|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2	0.013934	
chr7	93906264	93906378	reg1024633.p1	6.338	+	BT009853 DQ894078 BC000899 TSC_hg19_v1_chr7_-_93633668 CR749267 AF007551 AK313984 BC012595 NM_005868	-272707	-	NM_004126 BC009709	-355265	+	BC029367 NM_021955	-370502	+	J03464 NM_000089 X02488	117551	+	TSC_hg19_v1_chr7_+_94024206 AK297786 AK223175 AK300194 Z74616 AK226074 BC042586 BC054498 Y00724 CU691094 AB384984	117950	+	TSC_hg19_v1_chr7_+_94139172 BC029543 NM_022900 BC063284 AF397424	232801	+	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##J03464|COL1A2|1278|collagen, type I, alpha 2##NM_000089|COL1A2|1278|collagen, type I, alpha 2##X02488|COL1A2|1278|collagen, type I, alpha 2##AK297786|COL1A2|1278|collagen, type I, alpha 2##AK223175|COL1A2|1278|collagen, type I, alpha 2##AK300194|COL1A2|1278|collagen, type I, alpha 2##Z74616|COL1A2|1278|collagen, type I, alpha 2##AK226074|COL1A2|1278|collagen, type I, alpha 2##BC042586|COL1A2|1278|collagen, type I, alpha 2##BC054498|COL1A2|1278|collagen, type I, alpha 2##Y00724|COL1A2|1278|collagen, type I, alpha 2##BC029543|CASD1|64921|CAS1 domain containing 1##NM_022900|CASD1|64921|CAS1 domain containing 1##BC063284|CASD1|64921|CAS1 domain containing 1##AF397424|CASD1|64921|CAS1 domain containing 1	0.917483	CTCF.p2:5:0.917
chr10	18505569	18505666	reg1022904.p1	6.337	+	NM_201593 NM_201596 NM_201597 S60415 BC136409 AF137376 AF423191 AY393860 AY675091 AK296471 AK311694 AK307526 NM_001167945 NM_201571 NM_201572 AK293837	-75910	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	-264788	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	-407224	+	NM_000724 AB208917 U95019	44023	+	AK310943 NM_201590	123996	+	NM_201570 AK299873 AK295113	183946	+	NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK310943|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201590|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	0.998372	CTCF.p2:5:0.998
chr16	83960390	83960497	reg1021712.p2	6.337	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	-27674	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	-118787	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	-118843	+	NM_182981 TSC_hg19_v1_chr16_+_83986844 AK290383 AY258068 AY037158 BC020434 BC032476 BC093687 BC113417	26441	+	TSC_hg19_v1_chr16_+_84002230 AY299331 NM_019065 BC131615 AK127376	41769	+	NM_001080442	115318	-	BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##NM_182981|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK290383|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY258068|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY037158|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC020434|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC032476|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC093687|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC113417|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY299331|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_019065|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##BC131615|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##AK127376|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_001080442|SLC38A8|146167|solute carrier family 38, member 8	0.922329	CTCF.p2:-1:0.922
chr5	85975385	85975515	reg1020432.p1	6.337	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	-61633	+	TSC_hg19_v1_chr5_+_85913757 AK026505	-61692	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-2294786	-	TSC_hg19_v1_chr5_+_86563706 CR749722	588235	+	TSC_hg19_v1_chr5_+_86563831 BC131816	588376	+	TSC_hg19_v1_chr5_+_86564085 AB209106 NM_002890 BC033015	588616	+	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.671922	CTCF.p2:22:0.672
chr8	10874025	10874154	reg1020513.p2	6.337	+	TSC_hg19_v1_chr8_-_10697386 AF205718 AF418553 AJ344104	-176680	-	AY238941 AY523566 BC093762 BC143382 NM_017884 TSC_hg19_v1_chr8_-_10697379 AY029161 AK313715 BC015479 AK296724	-176755	-	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	-286105	-	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	184776	-	TSC_hg19_v1_chr8_+_11141999 BC034990 NM_015458	267923	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	268266	+	AF205718|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF418553|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ344104|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY238941|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY523566|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC093762|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC143382|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##NM_017884|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AK313715|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC015479|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7##AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##BC034990|MTMR9|66036|myotubularin related protein 9##NM_015458|MTMR9|66036|myotubularin related protein 9##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9	0.017593	
chr19	50427679	50427828	reg1022034.p2	6.336	+	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	-14651	-	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	-27600	-	TSC_hg19_v1_chr19_+_50381392 AK090606 AX746531	-46295	+	NM_012068 AK290592	4235	+	NM_001193646 AK091985 AB021663 AK024402 TSC_hg19_v1_chr19_+_50432461 AB073613 BC005174	4681	+	AJ880387 TSC_hg19_v1_chr19_-_50432664 AJ880386	4904	-	CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##AK090606|TBC1D17|79735|TBC1 domain family, member 17##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5##NM_001193646|ATF5|22809|activating transcription factor 5##AK091985|ATF5|22809|activating transcription factor 5##AB021663|ATF5|22809|activating transcription factor 5##AK024402|ATF5|22809|activating transcription factor 5##AB073613|ATF5|22809|activating transcription factor 5##BC005174|ATF5|22809|activating transcription factor 5##AJ880387|IL4I1|259307|interleukin 4 induced 1##AJ880386|IL4I1|259307|interleukin 4 induced 1	0.0	
chr3	57021705	57021814	reg1023842.p2	6.336	+	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	-185848	-	AK293864 AB209661 NM_001128616	-212090	-	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-304552	-	AY221117 NM_181727 BC126274 BC136498	72744	+	AF433662 AK302493 NM_001128615	91554	-	AF458067 TSC_hg19_v1_chr3_-_57199347	177574	-	AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12##AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF458067|IL17RD|54756|interleukin 17 receptor D	0.0	
chr5	36729199	36729305	reg1022084.p2	6.336	+	NM_001166695 U03504 AB529121 AY954110 TSC_hg19_v1_chr5_+_36608562	-120756	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	-122524	+	NM_001166696 NM_004172	-122796	+	TSC_hg19_v1_chr5_-_36876762 AK000901	147511	-	TSC_hg19_v1_chr5_+_36876875 NM_015384 NM_133433 AJ627032 AJ640137	147612	+	TSC_hg19_v1_chr5_+_36876945 BC146821 BX640644 BC131490 AK290347 BX538178 BX538177	147818	+	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK000901|LOC646719|646719|uncharacterized LOC646719##NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)##NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)##BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)##BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)##BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)##AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)	0.999926	CTCF.p2:-7:1.000
chr1	207627972	207628083	reg1020104.p1	6.335	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-366	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-132922	+	TSC_hg19_v1_chr1_+_207495084 AB240569 AB240570	-132950	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	41551	+	NM_175710 BC109190 BC109191	190460	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	297366	+	NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240569|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240570|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein	0.0	
chr12	132486195	132486294	reg1019415.p1	6.335	+	TSC_hg19_v1_chr12_+_132434504 AK096311 BC064554 BC037208	-51712	+	TSC_hg19_v1_chr12_+_132434464 NM_015409	-51790	+	TSC_hg19_v1_chr12_+_132414244 AB528502	-71991	+	TSC_hg19_v1_chr12_+_132568827 AK126212 AK097720 AK289710	82570	+	TSC_hg19_v1_chr12_+_132568851 BC015414 BC066974	82611	+	CU691832 TSC_hg19_v1_chr12_-_132628865 BC040185 BC029279 AK097078 NM_175066 AB593157	142626	-	AK096311|EP400|57634|E1A binding protein p400##BC064554|EP400|57634|E1A binding protein p400##BC037208|EP400|57634|E1A binding protein p400##NM_015409|EP400|57634|E1A binding protein p400##AK126212|EP400NL|347918|EP400 N-terminal like##AK097720|EP400NL|347918|EP400 N-terminal like##AK289710|EP400NL|347918|EP400 N-terminal like##BC015414|EP400NL|347918|EP400 N-terminal like##BC066974|EP400NL|347918|EP400 N-terminal like##BC040185|DDX51|317781|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51##BC029279|DDX51|317781|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51##AK097078|DDX51|317781|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51##NM_175066|DDX51|317781|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51##AB593157|DDX51|317781|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	0.830069	CTCF.p2:19:0.830
chr2	173671265	173671400	reg1023272.p1	6.335	+	TSC_hg19_v1_chr2_+_173600637 AB027471 AK313084 BC024004 AB590290 DQ890549 DQ894011	-70660	+	AB209681 TSC_hg19_v1_chr2_+_173600599 U78516	-70732	+	TSC_hg19_v1_chr2_+_173600519 NM_007023	-70811	+	BC040183 NM_001100397 AK311500 AK311697	14994	+	AB208974 TSC_hg19_v1_chr2_+_173940455	269116	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	269214	+	AB027471|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK313084|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##BC024004|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ890549|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ894011|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB209681|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##U78516|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##NM_007023|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##BC040183|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##NM_001100397|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311500|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311697|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB208974|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK	0.979622	CTCF.p2:-2:0.980
chr4	109076679	109076805	reg1022629.p2	6.335	+	TSC_hg19_v1_chr4_+_108911045 BC000306 AM392952 AM393255 DQ891419 DQ894593 AB528829 AF001902	-165669	+	AK314444 TSC_hg19_v1_chr4_+_108911011	-165730	+	AF001903 NM_001184705 NM_005327 TSC_hg19_v1_chr4_+_108910984 X96752	-165806	+	AK303272 NM_001166119	11172	-	TSC_hg19_v1_chr4_+_109088684 BC020624	11942	+	TSC_hg19_v1_chr4_-_109090113 AF288571 AK225772 NM_001130713 NM_001130714 NM_016269	13057	-	BC000306|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ891419|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ894593|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001902|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK314444|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001903|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_001184705|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_005327|HADH|3033|hydroxyacyl-CoA dehydrogenase##X96752|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK303272|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1##BC020624|LOC641518|641518|uncharacterized LOC641518##AF288571|LEF1|51176|lymphoid enhancer-binding factor 1##AK225772|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1##NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1	0.469062	CTCF.p2:4:0.469
chr5	64372302	64372423	reg1024771.p1	6.335	+	BX647971 TSC_hg19_v1_chr5_+_64064766 NM_005869 AK225161 AK225105 AK308223 AK312954 AY358569 AF039692 BC012117	-307578	+	TSC_hg19_v1_chr5_-_64064491 AK094073 AX748442 NM_173829	-307858	-	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	-307916	-	AY692424 NM_197941 AY692422	405362	-	TSC_hg19_v1_chr5_-_64858996 AF315941 BC005400 BC008504 NM_022145	486602	-	TSC_hg19_v1_chr5_+_64859122 AK025679 AK093675 AK300022 AK298175 AK301654 NM_015342 BC015385 AB384434 CU677289 GQ129262 GQ129263 D38552	486756	+	BX647971|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##NM_005869|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225161|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225105|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK308223|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK312954|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AY358569|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AF039692|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##BC012117|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK094073|SREK1IP1|285672|SREK1-interacting protein 1##NM_173829|SREK1IP1|285672|SREK1-interacting protein 1##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1##AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AF315941|CENPK|64105|centromere protein K##BC005400|CENPK|64105|centromere protein K##BC008504|CENPK|64105|centromere protein K##NM_022145|CENPK|64105|centromere protein K##AK025679|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK300022|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK298175|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK301654|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##NM_015342|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##BC015385|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129262|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129263|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##D38552|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1	0.993286	CTCF.p2:-12:0.993
chr9	124506740	124506842	reg1021728.p1	6.335	+	AY032952 NM_138709	-1728	+	TSC_hg19_v1_chr9_+_124461442 AF367051	-45285	+	NM_032552	-177393	+	TSC_hg19_v1_chr9_-_124855560 AK125178	348797	-	AF521886 NM_001139442 NM_194252	349093	-	TSC_hg19_v1_chr9_-_124922039 BC001016 AF044953	415221	-	AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##AF367051|DAB2IP|153090|DAB2 interacting protein##NM_032552|DAB2IP|153090|DAB2 interacting protein##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AF521886|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_001139442|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_194252|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##BC001016|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AF044953|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa	0.010079	
chr3	71760231	71760330	reg1021951.p2	6.334	+	TSC_hg19_v1_chr3_-_71632874 AK122710 NM_001244808 BC005055 BC054815 BC071893 BC080521 BC068481 NM_001012505 NM_001244810 NM_032682	-127302	-	AF250920 NM_001244816	-167573	-	TSC_hg19_v1_chr3_-_71542628 AF146696 BC054505	-217613	-	AK126999 TSC_hg19_v1_chr3_-_71774554 NM_001134651	14224	-	NM_001134650	17988	-	AB040799 HQ709187 NM_018971	42920	+	AK122710|FOXP1|27086|forkhead box P1##NM_001244808|FOXP1|27086|forkhead box P1##BC005055|FOXP1|27086|forkhead box P1##BC054815|FOXP1|27086|forkhead box P1##BC071893|FOXP1|27086|forkhead box P1##BC080521|FOXP1|27086|forkhead box P1##BC068481|FOXP1|27086|forkhead box P1##NM_001012505|FOXP1|27086|forkhead box P1##NM_001244810|FOXP1|27086|forkhead box P1##NM_032682|FOXP1|27086|forkhead box P1##AF250920|FOXP1|27086|forkhead box P1##NM_001244816|FOXP1|27086|forkhead box P1##AF146696|FOXP1|27086|forkhead box P1##BC054505|FOXP1|27086|forkhead box P1##AK126999|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134651|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134650|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##AB040799|GPR27|2850|G protein-coupled receptor 27##HQ709187|GPR27|2850|G protein-coupled receptor 27##NM_018971|GPR27|2850|G protein-coupled receptor 27	0.986406	CTCF.p2:-13:0.986
chr5	162733532	162733659	reg1021389.p1	6.334	+	NM_000816 NM_198903 NM_198904 BC052926 BC036030 X15376 BC059389 BC069348 BC074795 AK315200 AK299640	-1238750	+	NM_001127648 AB590312 DQ890915	-1455836	+	NM_001127647	-1456204	+	TSC_hg19_v1_chr5_+_162864606 AK316234 NM_004060 NM_199246 AK297190 AK312913 BC007093 BX538035 D78341 L49504 BC000196	131026	+	AB528197 AM392736 AM393438 FJ215684 AK094647 TSC_hg19_v1_chr5_-_162887097	153483	-	AK311957 TSC_hg19_v1_chr5_-_162887119 BC017934 BX538290 NM_145266	153538	-	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127647|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK316234|CCNG1|900|cyclin G1##NM_004060|CCNG1|900|cyclin G1##NM_199246|CCNG1|900|cyclin G1##AK297190|CCNG1|900|cyclin G1##AK312913|CCNG1|900|cyclin G1##BC007093|CCNG1|900|cyclin G1##BX538035|CCNG1|900|cyclin G1##D78341|CCNG1|900|cyclin G1##L49504|CCNG1|900|cyclin G1##BC000196|CCNG1|900|cyclin G1##AM392736|NUDCD2|134492|NudC domain containing 2##AM393438|NUDCD2|134492|NudC domain containing 2##FJ215684|NUDCD2|134492|NudC domain containing 2##AK311957|NUDCD2|134492|NudC domain containing 2##BC017934|NUDCD2|134492|NudC domain containing 2##BX538290|NUDCD2|134492|NudC domain containing 2##NM_145266|NUDCD2|134492|NudC domain containing 2	0.995896	CTCF.p2:25:0.996
chr6	32383360	32383454	reg1020442.p1	6.334	+	BC119668 BC127641 BC127642 NM_019602 AY684332 AY684333	-8505	-	AK302176 BC034774 NM_006781 AK310230 AK225742	-43744	-	U95299 BC140782 BC144540 BC144541 BC063815 AK290785 NM_004557	-191596	-	NM_019111 TSC_hg19_v1_chr6_+_32407663 AK301134 AK297032 AK301354 AK301190 AK304429 AK313123 BC071659 BC032350 AK310161 J00197 J00194 M60333 M60334 J00195 K01171 M35979 AB528984 CR457013 CU687128 DQ891595 DQ894789	24265	+	U17380 M30181 AB463852 M20429 NM_002125 BC009234 AK314834 TSC_hg19_v1_chr6_-_32498065 M57648 M32578 M20503	114610	-	AF017439 TSC_hg19_v1_chr6_-_32552033 U56640 AF436097 U83583 U83584 U95818 M21008 AM056024	168666	-	BC119668|BTNL2|56244|butyrophilin-like 2 (MHC class II associated)##BC127641|BTNL2|56244|butyrophilin-like 2 (MHC class II associated)##BC127642|BTNL2|56244|butyrophilin-like 2 (MHC class II associated)##NM_019602|BTNL2|56244|butyrophilin-like 2 (MHC class II associated)##AY684332|BTNL2|56244|butyrophilin-like 2 (MHC class II associated)##AY684333|BTNL2|56244|butyrophilin-like 2 (MHC class II associated)##AK302176|C6orf10|10665|chromosome 6 open reading frame 10##BC034774|C6orf10|10665|chromosome 6 open reading frame 10##NM_006781|C6orf10|10665|chromosome 6 open reading frame 10##AK310230|C6orf10|10665|chromosome 6 open reading frame 10##AK225742|C6orf10|10665|chromosome 6 open reading frame 10##U95299|NOTCH4|4855|notch 4##BC140782|NOTCH4|4855|notch 4##BC144540|NOTCH4|4855|notch 4##BC144541|NOTCH4|4855|notch 4##BC063815|NOTCH4|4855|notch 4##AK290785|NOTCH4|4855|notch 4##NM_004557|NOTCH4|4855|notch 4##NM_019111|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##AK301134|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##AK297032|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##AK301354|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##AK301190|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##AK313123|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##BC071659|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##BC032350|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##AK310161|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##J00194|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##M60333|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##M60334|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##K01171|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##M35979|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##CR457013|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##DQ891595|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##DQ894789|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##M30181|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M20429|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##NM_002125|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##BC009234|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AK314834|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M57648|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M32578|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M20503|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AF017439|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##U56640|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AF436097|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##U95818|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M21008|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1	0.101968	
chr11	66935862	66935944	reg1017823.p1	6.333	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	-49164	+	TSC_hg19_v1_chr11_+_66824317 BC001338 AF498973 CU674656 DQ891124 DQ894303	-111563	+	TSC_hg19_v1_chr11_+_66824285 NM_014578	-111617	+	AK096194 TSC_hg19_v1_chr11_+_67007484	71581	+	TSC_hg19_v1_chr11_+_67007558 AB490246 AK299725	71680	+	TSC_hg19_v1_chr11_+_67033926 NM_001619	98005	+	BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A##BC001338|RHOD|29984|ras homolog gene family, member D##AF498973|RHOD|29984|ras homolog gene family, member D##DQ891124|RHOD|29984|ras homolog gene family, member D##DQ894303|RHOD|29984|ras homolog gene family, member D##NM_014578|RHOD|29984|ras homolog gene family, member D##AK096194|LOC100131150|100131150|uncharacterized LOC100131150##AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A##AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_001619|ADRBK1|156|adrenergic, beta, receptor kinase 1	0.999499	CTCF.p2:7:0.999
chr12	62586580	62586700	reg1023109.p2	6.333	+	BC050347 NM_178539	-57	-	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	-2503501	+	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	-2596723	+	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	67544	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	273939	+	BC042679 AB017814 AB384555 TSC_hg19_v1_chr12_+_62861012	274275	+	BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)##AB017814|MON2|23041|MON2 homolog (S. cerevisiae)	0.105625	
chr19	267490	267617	reg1022062.p2	6.332	+	AY972818 AY972819 BC136848 BC136867 BC136907 BC136908 NM_001005240	-156902	+	TSC_hg19_v1_chr19_-_70955 AK308635	-196594	-	None	None	None	NM_177543	23615	-	BT007021 CU678210 AF035959 AF047760 AF056083 BC002806 TSC_hg19_v1_chr19_-_291402 NM_003712 NM_177526	23831	-	TSC_hg19_v1_chr19_-_344795 BC028203 NM_017550	77234	-	AY972818|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AY972819|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136848|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136867|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##BC136907|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##BC136908|OR4F4|26682|olfactory receptor, family 4, subfamily F, member 4##NM_001005240|OR4F17|81099|olfactory receptor, family 4, subfamily F, member 17##AK308635|WASH5P|375690|WAS protein family homolog 5 pseudogene##NM_177543|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BT007021|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF035959|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF047760|PPAP2C|8612|phosphatidic acid phosphatase type 2C##AF056083|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BC002806|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_003712|PPAP2C|8612|phosphatidic acid phosphatase type 2C##NM_177526|PPAP2C|8612|phosphatidic acid phosphatase type 2C##BC028203|MIER2|54531|mesoderm induction early response 1, family member 2##NM_017550|MIER2|54531|mesoderm induction early response 1, family member 2	0.923246	CTCF.p2:-3:0.923
chr6	126109096	126109192	reg1020433.p2	6.332	+	TSC_hg19_v1_chr6_+_126102306 AF493978 NM_001199619 NM_001199620 AK307395 BC137094 BC137095	-6810	+	TSC_hg19_v1_chr6_+_126070895 AB463717 AF311884 BT020067 BT020068 CU675765	-38236	+	AK289943 AF232238 AB044755 BC007707 TSC_hg19_v1_chr6_+_126070853 AF237949 AJ249545	-38302	+	TSC_hg19_v1_chr6_+_126111841 NM_001122842 NM_001199621 NM_181782	2709	+	TSC_hg19_v1_chr6_+_126112105 BC036461 AK127512 AB074157 AK294558 BX537385 AL832621 AL832628 AB074156	2964	+	NM_001199622 TSC_hg19_v1_chr6_+_126240392 AK094706	131279	+	AF493978|NCOA7|135112|nuclear receptor coactivator 7##NM_001199619|NCOA7|135112|nuclear receptor coactivator 7##NM_001199620|NCOA7|135112|nuclear receptor coactivator 7##AK307395|NCOA7|135112|nuclear receptor coactivator 7##BC137094|NCOA7|135112|nuclear receptor coactivator 7##BC137095|NCOA7|135112|nuclear receptor coactivator 7##AF311884|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##BT020067|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##BT020068|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AK289943|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF232238|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AB044755|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##BC007707|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF237949|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AJ249545|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##NM_001122842|NCOA7|135112|nuclear receptor coactivator 7##NM_001199621|NCOA7|135112|nuclear receptor coactivator 7##NM_181782|NCOA7|135112|nuclear receptor coactivator 7##BC036461|NCOA7|135112|nuclear receptor coactivator 7##AK127512|NCOA7|135112|nuclear receptor coactivator 7##AB074157|NCOA7|135112|nuclear receptor coactivator 7##AK294558|NCOA7|135112|nuclear receptor coactivator 7##BX537385|NCOA7|135112|nuclear receptor coactivator 7##AL832621|NCOA7|135112|nuclear receptor coactivator 7##AL832628|NCOA7|135112|nuclear receptor coactivator 7##AB074156|NCOA7|135112|nuclear receptor coactivator 7##NM_001199622|NCOA7|135112|nuclear receptor coactivator 7##AK094706|NCOA7|135112|nuclear receptor coactivator 7	0.0	
chr8	114384700	114384805	reg1023887.p2	6.332	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-3397786	-	NM_001099743 NM_001099744	-3680733	-	AK290469 NM_001099745 NM_001099746	-3691519	-	AB114605 NM_198124	4629	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	64377	-	TSC_hg19_v1_chr8_-_116680208 AK304046	2295468	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.703383	CTCF.p2:10:0.703
chr15	70489184	70489354	reg1020462.p1	6.331	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-99026	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-99042	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-147360	-	TSC_hg19_v1_chr15_-_70878946 BC040579	389675	-	BC016881 AL834243 NM_001008224 AK055435	505358	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	566573	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.0	
chr2	112483481	112483583	reg1023465.p1	6.331	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-605045	+	AK300513 NM_001142807 BC022268	-993353	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-1047710	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	158094	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	158229	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	172653	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.719412	CTCF.p2:6:0.442	CTCF.p2:-103:0.278
chr5	140749689	140749798	reg1020766.p1	6.331	+	TSC_hg19_v1_chr5_+_140743759 BC104926 BC113460 AF152325 AF152512 NM_018918 NM_032054	-5917	+	TSC_hg19_v1_chr5_+_140739589 BC101805 AF152331 AF152518 NM_018923 NM_032096	-10098	+	AB527386 AF152324 AF152511 NM_018917 NM_032053	-14976	+	BC150172 AF152332 AF152519 NM_018924 NM_032097	152	+	AB209178 BC146651 BC136702 BC136703 AF152326 AF152513 NM_018919 NM_032086	3822	+	BC136747 BC136748 AF152327 AF152514 NM_018920 NM_032087 AB208958	12745	+	BC104926|PCDHGA5|56110|protocadherin gamma subfamily A, 5##BC113460|PCDHGA5|56110|protocadherin gamma subfamily A, 5##AF152325|PCDHGA5|56110|protocadherin gamma subfamily A, 5##AF152512|PCDHGA5|56110|protocadherin gamma subfamily A, 5##NM_018918|PCDHGA5|56110|protocadherin gamma subfamily A, 5##NM_032054|PCDHGA5|56110|protocadherin gamma subfamily A, 5##BC101805|PCDHGB2|56103|protocadherin gamma subfamily B, 2##AF152331|PCDHGB2|56103|protocadherin gamma subfamily B, 2##AF152518|PCDHGB2|56103|protocadherin gamma subfamily B, 2##NM_018923|PCDHGB2|56103|protocadherin gamma subfamily B, 2##NM_032096|PCDHGB2|56103|protocadherin gamma subfamily B, 2##AF152324|PCDHGA4|56111|protocadherin gamma subfamily A, 4##AF152511|PCDHGA4|56111|protocadherin gamma subfamily A, 4##NM_018917|PCDHGA4|56111|protocadherin gamma subfamily A, 4##NM_032053|PCDHGA4|56111|protocadherin gamma subfamily A, 4##BC150172|PCDHGB3|56102|protocadherin gamma subfamily B, 3##AF152332|PCDHGB3|56102|protocadherin gamma subfamily B, 3##AF152519|PCDHGB3|56102|protocadherin gamma subfamily B, 3##NM_018924|PCDHGB3|56102|protocadherin gamma subfamily B, 3##NM_032097|PCDHGB3|56102|protocadherin gamma subfamily B, 3##AB209178|PCDHGA6|56109|protocadherin gamma subfamily A, 6##BC146651|PCDHGA6|56109|protocadherin gamma subfamily A, 6##BC136702|PCDHGA6|56109|protocadherin gamma subfamily A, 6##BC136703|PCDHGA6|56109|protocadherin gamma subfamily A, 6##AF152326|PCDHGA6|56109|protocadherin gamma subfamily A, 6##AF152513|PCDHGA6|56109|protocadherin gamma subfamily A, 6##NM_018919|PCDHGA6|56109|protocadherin gamma subfamily A, 6##NM_032086|PCDHGA6|56109|protocadherin gamma subfamily A, 6##BC136747|PCDHGA7|56108|protocadherin gamma subfamily A, 7##BC136748|PCDHGA7|56108|protocadherin gamma subfamily A, 7##AF152327|PCDHGA7|56108|protocadherin gamma subfamily A, 7##AF152514|PCDHGA7|56108|protocadherin gamma subfamily A, 7##NM_018920|PCDHGA7|56108|protocadherin gamma subfamily A, 7##NM_032087|PCDHGA7|56108|protocadherin gamma subfamily A, 7##AB208958|PCDHGA7|56108|protocadherin gamma subfamily A, 7	0.0	
chr7	97475054	97475162	reg1021821.p1	6.331	+	NM_003182 NM_013996 NM_013997 NM_013998 U37529 AK222957 BC018047 X54469	-113756	+	TSC_hg19_v1_chr7_+_96747012 BC022858 AF201933 BC020621	-728078	+	BC028409 NM_020186	-729204	+	AK302242 AK000379 NM_001178077 NM_133436	26342	-	BC008723 TSC_hg19_v1_chr7_-_97501721 BC014621	26596	-	TSC_hg19_v1_chr7_-_97501785 AK302189 M27396 AK316224 NM_001178075 NM_001178076 NM_001673 NM_183356	26687	-	NM_003182|TAC1|6863|tachykinin, precursor 1##NM_013996|TAC1|6863|tachykinin, precursor 1##NM_013997|TAC1|6863|tachykinin, precursor 1##NM_013998|TAC1|6863|tachykinin, precursor 1##U37529|TAC1|6863|tachykinin, precursor 1##AK222957|TAC1|6863|tachykinin, precursor 1##BC018047|TAC1|6863|tachykinin, precursor 1##X54469|TAC1|6863|tachykinin, precursor 1##BC022858|ACN9|57001|ACN9 homolog (S. cerevisiae)##AF201933|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC020621|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)##AK302242|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK000379|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178077|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_133436|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC008723|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC014621|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK302189|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##M27396|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK316224|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178075|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178076|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001673|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_183356|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)	0.794986	CTCF.p2:7:0.795
chr13	105224131	105224276	reg1021473.p1	6.330	+	NM_000452 U10417	-1505008	-	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-1725717	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-1725949	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	894101	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	894388	+	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	1963146	-	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2	0.187978	
chr14	57341230	57341375	reg1023167.p1	6.330	+	AK314271 BC032579 NM_021728 AB593058	-64158	-	NM_172337 AB593056	-68939	-	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	-294757	+	CU691962 TSC_hg19_v1_chr14_-_57735388	394091	-	TSC_hg19_v1_chr14_-_57735546 U85946 AK295085 AK303531	394238	-	TSC_hg19_v1_chr14_-_57735559 BC041126 BC031298	394278	-	AK314271|OTX2|5015|orthodenticle homeobox 2##BC032579|OTX2|5015|orthodenticle homeobox 2##NM_021728|OTX2|5015|orthodenticle homeobox 2##AB593058|OTX2|5015|orthodenticle homeobox 2##NM_172337|OTX2|5015|orthodenticle homeobox 2##AB593056|OTX2|5015|orthodenticle homeobox 2##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101##U85946|EXOC5|10640|exocyst complex component 5##AK295085|EXOC5|10640|exocyst complex component 5##AK303531|EXOC5|10640|exocyst complex component 5##BC041126|EXOC5|10640|exocyst complex component 5##BC031298|EXOC5|10640|exocyst complex component 5	0.0	
chr16	24845914	24846043	reg1023241.p2	6.330	+	TSC_hg19_v1_chr16_+_24802422 AL833757	-43497	+	AY035864 TSC_hg19_v1_chr16_+_24788680	-57354	+	TSC_hg19_v1_chr16_+_24741000 NM_014494	-104980	+	AY044906 NM_052944 AK298373 AK125267	11615	+	TSC_hg19_v1_chr16_-_24942663 AK001170	96713	-	AK125358 TSC_hg19_v1_chr16_-_24968918	122914	-	AL833757|TNRC6A|27327|trinucleotide repeat containing 6A##AY035864|TNRC6A|27327|trinucleotide repeat containing 6A##NM_014494|TNRC6A|27327|trinucleotide repeat containing 6A##AY044906|SLC5A11|115584|solute carrier family 5 (sodium/glucose cotransporter), member 11##NM_052944|SLC5A11|115584|solute carrier family 5 (sodium/glucose cotransporter), member 11##AK298373|SLC5A11|115584|solute carrier family 5 (sodium/glucose cotransporter), member 11##AK125267|SLC5A11|115584|solute carrier family 5 (sodium/glucose cotransporter), member 11##AK001170|ARHGAP17|55114|Rho GTPase activating protein 17##AK125358|ARHGAP17|55114|Rho GTPase activating protein 17	0.0	
chr19	33467252	33467346	reg1018921.p1	6.330	+	AK309396 NM_152266 AK128668 BC020247 BC010170 BC003535	-4129	+	BC029978 TSC_hg19_v1_chr19_-_33462855 AK001375 BC136328 AL832158 BC032307 NM_032816	-4456	-	BC029802 AF141289 AB033548 AK026446 AK223147 AK313708 BC017962 NM_001126335 NM_001243036 NM_014270	-106638	-	AF423421 AJ347750 DQ892111 DQ895305 TSC_hg19_v1_chr19_-_33555795 AF268032 AK098246 AK300775 AK315105 BC036447 NM_033103	88491	-	BC006108 NM_018025	104486	+	BC031227 NM_173479 AB527326	155737	+	NM_152266|C19orf40|91442|chromosome 19 open reading frame 40##AK128668|C19orf40|91442|chromosome 19 open reading frame 40##BC020247|C19orf40|91442|chromosome 19 open reading frame 40##BC010170|C19orf40|91442|chromosome 19 open reading frame 40##BC003535|C19orf40|91442|chromosome 19 open reading frame 40##BC029978|CEP89|84902|centrosomal protein 89kDa##BC136328|CEP89|84902|centrosomal protein 89kDa##AL832158|CEP89|84902|centrosomal protein 89kDa##BC032307|CEP89|84902|centrosomal protein 89kDa##NM_032816|CEP89|84902|centrosomal protein 89kDa##BC029802|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AF141289|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AB033548|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AK026446|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AK223147|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AK313708|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##BC017962|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##NM_001126335|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##NM_001243036|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##NM_014270|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AF423421|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AJ347750|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ892111|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ895305|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AF268032|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK098246|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK300775|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK315105|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##BC036447|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##NM_033103|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##BC006108|GPATCH1|55094|G patch domain containing 1##NM_018025|GPATCH1|55094|G patch domain containing 1##BC031227|WDR88|126248|WD repeat domain 88##NM_173479|WDR88|126248|WD repeat domain 88	0.979682	CTCF.p2:0:0.980
chr3	195906516	195906696	reg1010701.p1	6.330	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-97590	-	TSC_hg19_v1_chr3_-_195808984 M11507	-97623	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-97645	-	BC034801 BC022078 NM_001039617 AK122907	31675	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	36788	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	107929	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr7	144424070	144424182	reg1024173.p1	6.330	+	NM_001080413 AB528776	-316807	-	AK160365 TSC_hg19_v1_chr7_+_144052469 NM_005435 CR749203 BC136661	-371623	+	NM_001001802 NM_001005287	-408909	+	TSC_hg19_v1_chr7_-_144533086 AK091736	108963	-	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	109010	-	NM_014141	1389326	+	NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_001001802|OR2A42|402317|olfactory receptor, family 2, subfamily A, member 42##NM_001005287|OR2A1|346528|olfactory receptor, family 2, subfamily A, member 1##AK091736|TPK1|27010|thiamin pyrophosphokinase 1##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##NM_014141|CNTNAP2|26047|contactin associated protein-like 2	0.830069	CTCF.p2:-10:0.830
chr15	75405079	75405260	reg1019807.p1	6.329	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-89188	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-89241	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-117262	+	AK128205 TSC_hg19_v1_chr15_+_75491259	86077	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	89043	+	BC110367 TSC_hg19_v1_chr15_+_75494233	89064	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chrX	144486687	144486779	reg1021346.p1	6.329	+	DQ336118 DQ336119 DQ336120 DQ336121 NM_001009614	-157627	+	GU727624 NM_001012989	-1519561	+	NM_001009615	-1682218	-	TSC_hg19_v1_chrX_+_144899439 NM_001144003 NM_001144004 NM_001144005 NM_032539 AK096278 CR627412 AK289732	412680	+	NM_001144006 NM_001144008 NM_001144009 NM_001144010 BC113011 BC113012 TSC_hg19_v1_chrX_+_144903056	416231	+	NM_004709 Y08902 BC113600 BC113604 HQ258719	422328	+	DQ336118|SPANXN1|494118|SPANX family, member N1##DQ336119|SPANXN1|494118|SPANX family, member N1##DQ336120|SPANXN1|494118|SPANX family, member N1##DQ336121|SPANXN1|494118|SPANX family, member N1##NM_001009614|SPANXN1|494118|SPANX family, member N1##GU727624|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like##NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like##NM_001009615|SPANXN2|494119|SPANX family, member N2##NM_001144003|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144004|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144005|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_032539|SLITRK2|84631|SLIT and NTRK-like family, member 2##AK096278|SLITRK2|84631|SLIT and NTRK-like family, member 2##CR627412|SLITRK2|84631|SLIT and NTRK-like family, member 2##AK289732|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144006|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144008|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144009|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144010|SLITRK2|84631|SLIT and NTRK-like family, member 2##BC113011|SLITRK2|84631|SLIT and NTRK-like family, member 2##BC113012|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_004709|CXorf1|9142|chromosome X open reading frame 1##Y08902|CXorf1|9142|chromosome X open reading frame 1##BC113600|CXorf1|9142|chromosome X open reading frame 1##BC113604|CXorf1|9142|chromosome X open reading frame 1##HQ258719|CXorf1|9142|chromosome X open reading frame 1	0.992202	CTCF.p2:0:0.992
chr10	120480656	120480790	reg1022763.p2	6.328	+	AK313269 AK290461 NM_004248	-125565	-	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	-378899	-	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	-674293	+	CU691560 TSC_hg19_v1_chr10_-_120514298	33564	-	TSC_hg19_v1_chr10_-_120514483 AJ544771 AK097728	33788	-	TSC_hg19_v1_chr10_-_120514701 AY743663 BC038294 NM_153810	33994	-	AK313269|PRLHR|2834|prolactin releasing hormone receptor##AK290461|PRLHR|2834|prolactin releasing hormone receptor##NM_004248|PRLHR|2834|prolactin releasing hormone receptor##AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A##BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ544771|C10orf46|143384|chromosome 10 open reading frame 46##AK097728|C10orf46|143384|chromosome 10 open reading frame 46##AY743663|C10orf46|143384|chromosome 10 open reading frame 46##BC038294|C10orf46|143384|chromosome 10 open reading frame 46##NM_153810|C10orf46|143384|chromosome 10 open reading frame 46	0.981742	CTCF.p2:0:0.982
chr12	115813273	115813453	reg1022504.p2	6.328	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-691223	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-967145	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-969439	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	901587	-	TSC_hg19_v1_chr12_-_116715263 AY338463	901797	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	1157866	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.0	
chr1	43823835	43823941	reg1020894.p1	6.328	+	NM_005373 AB463906 DQ234353 M90102 M90103	-20392	+	NM_001253357 NM_005424 AK307639 BC038239 AK300399 AK225560 AF217976 AK300623 X60957 AB385197 CU691552 EU826586 EU826587 EU826588 EU826589 EU826590	-57235	+	BC041633 NM_182517 NM_001164829	-72626	-	AK303844 TSC_hg19_v1_chr1_+_43824652 BC001088 BC012827 NM_001255 AK302539 U05340 BC010044 BC009425 BC009426 BC012803 BC013303 BC024257 BC031294 AK225504 AK312780 BC015998 BC110321 BC000624 BC006272 AF099644 AB590358 DQ892290 DQ895489 EU831627 EU831712 CU674302 CU675321 CU679585 BT007388	854	+	TSC_hg19_v1_chr1_-_43833649 AK130174 BC000618	9747	-	TSC_hg19_v1_chr1_-_43833683 AF336793 AK001653 BC095456 AK298163	9789	-	NM_005373|MPL|4352|myeloproliferative leukemia virus oncogene##DQ234353|MPL|4352|myeloproliferative leukemia virus oncogene##M90102|MPL|4352|myeloproliferative leukemia virus oncogene##M90103|MPL|4352|myeloproliferative leukemia virus oncogene##NM_001253357|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##NM_005424|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##AK307639|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##BC038239|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##AK300399|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##AK225560|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##AF217976|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##AK300623|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##X60957|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##EU826586|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##EU826587|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##EU826588|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##EU826589|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##EU826590|TIE1|7075|tyrosine kinase with immunoglobulin-like and EGF-like domains 1##BC041633|C1orf210|149466|chromosome 1 open reading frame 210##NM_182517|C1orf210|149466|chromosome 1 open reading frame 210##NM_001164829|C1orf210|149466|chromosome 1 open reading frame 210##AK303844|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC001088|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC012827|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##NM_001255|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##AK302539|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##U05340|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC010044|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC009425|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC009426|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC012803|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC013303|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC024257|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC031294|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##AK225504|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##AK312780|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC015998|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC110321|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC000624|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BC006272|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##AF099644|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##DQ892290|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##DQ895489|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##EU831627|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##EU831712|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##BT007388|CDC20|991|cell division cycle 20 homolog (S. cerevisiae)##AK130174|ELOVL1|64834|ELOVL fatty acid elongase 1##BC000618|ELOVL1|64834|ELOVL fatty acid elongase 1##AF336793|ELOVL1|64834|ELOVL fatty acid elongase 1##AK001653|ELOVL1|64834|ELOVL fatty acid elongase 1##BC095456|ELOVL1|64834|ELOVL fatty acid elongase 1##AK298163|ELOVL1|64834|ELOVL fatty acid elongase 1	0.03471	
chr8	28213212	28213329	reg1023071.p1	6.328	+	NM_006228 U48263 TSC_hg19_v1_chr8_+_28174784 AK289633 AY335948 BC034758	-38545	+	NM_018091 TSC_hg19_v1_chr8_+_27950679 AK302140 AK296475 AK022626 AK295574 AK001284 AK293424 AK315985 AK316053 AK298265 BC001240 AL834273 AB463602 AM392633	-262613	+	AB075870 NM_001010906	-271883	-	BC001237 TSC_hg19_v1_chr8_-_28243694	30372	-	AK002050 AK023418 NM_018660 AB057659 AB073627	30691	-	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	134509	-	NM_006228|PNOC|5368|prepronociceptin##U48263|PNOC|5368|prepronociceptin##AK289633|PNOC|5368|prepronociceptin##AY335948|PNOC|5368|prepronociceptin##BC034758|PNOC|5368|prepronociceptin##NM_018091|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK302140|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK296475|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK022626|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK295574|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK001284|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK293424|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK315985|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK316053|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK298265|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##BC001240|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AL834273|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AM392633|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AB075870|C8orf80|389643|chromosome 8 open reading frame 80##NM_001010906|C8orf80|389643|chromosome 8 open reading frame 80##BC001237|ZNF395|55893|zinc finger protein 395##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16	0.0	
chr9	117777450	117777548	reg1000468.p3	6.328	+	AK313619 NM_001244 NM_001252290	-84625	-	AB590753 AK291642 BC074940 BC074941 BC069435 AK313721 BC104462 BC104463 NM_005118 AF520785	-209148	-	AY434464 NM_001204344	-222690	-	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	102974	-	AB022761 NM_017418	126597	+	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	1138571	+	AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##AK291642|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074940|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074941|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC069435|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313721|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104462|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104463|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_005118|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AF520785|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AY434464|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001204344|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1	0.813324	CTCF.p2:3:0.813
chr1	215249810	215249921	reg1024888.p1	6.327	+	NM_001017424	-70981	+	TSC_hg19_v1_chr1_+_214776585 U30872	-473247	+	TSC_hg19_v1_chr1_+_214776547 NM_016343 U19769 AK307690	-473344	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	6745	+	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	490998	+	AF055580 AY481573 NM_007123 NM_206933	1346872	-	NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2##U30872|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##NM_016343|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##U19769|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##AK307690|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3##AF055580|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##AY481573|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_007123|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_206933|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)	0.723606	CTCF.p2:-6:0.724
chr18	51436224	51436347	reg1021234.p2	6.327	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-1569172	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-1569744	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-2712245	-	TSC_hg19_v1_chr18_-_51690988 AL110266	254707	-	AF072246 TSC_hg19_v1_chr18_-_51750614	314252	-	TSC_hg19_v1_chr18_-_51750997 BC032638	314680	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	0.964155	CTCF.p2:-21:0.964
chr8	109085473	109085615	reg1023289.p1	6.327	+	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	-575356	-	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	-1303100	-	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	-1347189	+	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	10330	-	AB527268 CR457029 CR542275 CU674376 CU677689 CU678957 DQ892278 DQ895478 BC000734 TSC_hg19_v1_chr8_-_109260938 U54562 U85947	175390	-	TSC_hg19_v1_chr8_-_109260947 BC017887 AK313186 BC005944 BC016706 BC021679 U94175 U62962 BC008419 NM_001568 AK310902	175441	-	U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1##AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2##CR457029|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR542275|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ892278|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ895478|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC000734|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U54562|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U85947|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC017887|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK313186|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC005944|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC016706|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC021679|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U94175|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U62962|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC008419|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##NM_001568|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK310902|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E	0.756302	CTCF.p2:28:0.756
chr1	224192385	224192484	reg1020601.p2	6.326	+	NM_001031685 NM_005426 TSC_hg19_v1_chr1_-_224033682	-158740	-	TSC_hg19_v1_chr1_-_224033620 BC046150 AJ318888 U58334 BC058918	-158811	-	AB384887 TSC_hg19_v1_chr1_-_224033497 AK294432	-158971	-	NM_001136115 NM_015176 TSC_hg19_v1_chr1_+_224301812 AK001628 AK307892 BC031576 AK303381 CU689186	109376	+	TSC_hg19_v1_chr1_+_224370925 BC000961 NM_003676	178488	+	TSC_hg19_v1_chr1_+_224370941 AK308232 AF466375 AY423730 AF002668 CU674476	178553	+	NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2##BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2##AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2##U58334|TP53BP2|7159|tumor protein p53 binding protein, 2##BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2##AK294432|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_001136115|FBXO28|23219|F-box protein 28##NM_015176|FBXO28|23219|F-box protein 28##AK001628|FBXO28|23219|F-box protein 28##AK307892|FBXO28|23219|F-box protein 28##BC031576|FBXO28|23219|F-box protein 28##AK303381|FBXO28|23219|F-box protein 28##BC000961|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_003676|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AK308232|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF466375|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AY423730|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF002668|DEGS1|8560|delta(4)-desaturase, sphingolipid 1	0.197891	
chr18	49866300	49866426	reg1022322.p1	6.326	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-1142323	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-1142651	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-1143137	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	178	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	750	+	TSC_hg19_v1_chr18_-_51690988 AL110266	1824629	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.022316	
chr19	14169927	14170063	reg1023068.p1	6.325	+	NM_001145028	-25	-	TSC_hg19_v1_chr19_+_14142622 BC028003 DQ891051 DQ894230 CU688366	-27348	+	AF265242 AY358876 TSC_hg19_v1_chr19_+_14142572	-27410	+	TSC_hg19_v1_chr19_-_14201272 AY453840 NM_138352	31281	-	TSC_hg19_v1_chr19_-_14224999 AF208004 AF224718 NM_207518 AK292284 AF239744	55059	-	AB528630 X07767 TSC_hg19_v1_chr19_-_14228549 BC039846 BC108259 NM_002730	58465	-	NM_001145028|PALM3|342979|paralemmin 3##BC028003|IL27RA|9466|interleukin 27 receptor, alpha##DQ891051|IL27RA|9466|interleukin 27 receptor, alpha##DQ894230|IL27RA|9466|interleukin 27 receptor, alpha##AF265242|IL27RA|9466|interleukin 27 receptor, alpha##AY358876|IL27RA|9466|interleukin 27 receptor, alpha##AY453840|SAMD1|90378|sterile alpha motif domain containing 1##NM_138352|SAMD1|90378|sterile alpha motif domain containing 1##AF208004|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF224718|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##NM_207518|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AK292284|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF239744|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##X07767|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##BC039846|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##BC108259|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##NM_002730|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha	0.841863	CTCF.p2:-40:0.842
chr2	133106782	133106907	reg1025987.p1	6.325	+	BC043584 NM_214461	-547611	-	AF038169 NM_013310	-626781	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-821338	+	AK122643 NM_001508	67302	+	AY358628 BC017318 AK309849 AK075487 TSC_hg19_v1_chr2_-_133427783 AK130005 AK094501 AK123029	320859	-	NM_144586	321636	-	BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39##AY358628|LYPD1|116372|LY6/PLAUR domain containing 1##BC017318|LYPD1|116372|LY6/PLAUR domain containing 1##AK309849|LYPD1|116372|LY6/PLAUR domain containing 1##AK075487|LYPD1|116372|LY6/PLAUR domain containing 1##AK130005|LYPD1|116372|LY6/PLAUR domain containing 1##AK094501|LYPD1|116372|LY6/PLAUR domain containing 1##AK123029|LYPD1|116372|LY6/PLAUR domain containing 1##NM_144586|LYPD1|116372|LY6/PLAUR domain containing 1	0.0	
chr4	11625446	11625557	reg1023471.p1	6.325	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-194969	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-939100	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-1166491	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	1860450	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	1860474	-	AB463932 AF009801 EU446467 BC111966 NM_001189	1920574	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.020637	
chr4	85180510	85180641	reg1022645.p1	6.325	+	TSC_hg19_v1_chr4_+_84457420 DQ345298 BC090956 AY358100 NM_032717 DQ324782	-722994	+	TSC_hg19_v1_chr4_+_84457260 AK055749 AK223543	-723303	+	BC016905 TSC_hg19_v1_chr4_-_84406254 EF531340 BC039573 AY358576 AK022704 AK023676 NM_139076	-774301	-	NM_006168	238811	-	NM_001263 U65887	323518	+	NM_014991	706968	-	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK055749|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK223543|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC016905|FAM175A|84142|family with sequence similarity 175, member A##EF531340|FAM175A|84142|family with sequence similarity 175, member A##BC039573|FAM175A|84142|family with sequence similarity 175, member A##AY358576|FAM175A|84142|family with sequence similarity 175, member A##AK022704|FAM175A|84142|family with sequence similarity 175, member A##AK023676|FAM175A|84142|family with sequence similarity 175, member A##NM_139076|FAM175A|84142|family with sequence similarity 175, member A##NM_006168|NKX6-1|4825|NK6 homeobox 1##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3	0.761855	CTCF.p2:9:0.762
chr2	152861371	152861457	reg1019179.p2	6.324	+	AY054985 AK290049 NM_001005747	-30948	-	TSC_hg19_v1_chr2_-_152684998 NM_001037174 NM_012097 NM_177985	-176418	-	TSC_hg19_v1_chr2_-_152684936 AF087889 AK298937	-176468	-	AK294398 AK316045 TSC_hg19_v1_chr2_-_152955250 NM_001005746	93816	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	94133	-	TSC_hg19_v1_chr2_-_152955813 AK291378	94397	-	AY054985|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK290049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005747|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001037174|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_012097|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_177985|ARL5A|26225|ADP-ribosylation factor-like 5A##AF087889|ARL5A|26225|ADP-ribosylation factor-like 5A##AK298937|ARL5A|26225|ADP-ribosylation factor-like 5A##AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK291378|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	0.967889	CTCF.p2:20:0.968
chr5	38994556	38994696	reg1026008.p1	6.324	+	TSC_hg19_v1_chr5_+_38846260 BC125209 BC125210	-148331	+	TSC_hg19_v1_chr5_+_38846113 NM_003999 BC010943 U60805 AK304016 BC063468	-148552	+	NM_001168355 TSC_hg19_v1_chr5_+_38845959	-148667	+	CU688716 DQ891672 DQ894858 TSC_hg19_v1_chr5_-_39074493 AK128358 CR749280	79859	-	TSC_hg19_v1_chr5_-_39074499 AY515854 BC029608 BC137163 BC137164 BC144509 NM_152756	79871	-	AF198052 U93049 AF001862 TSC_hg19_v1_chr5_-_39203164	208491	-	BC125209|OSMR|9180|oncostatin M receptor##BC125210|OSMR|9180|oncostatin M receptor##NM_003999|OSMR|9180|oncostatin M receptor##BC010943|OSMR|9180|oncostatin M receptor##U60805|OSMR|9180|oncostatin M receptor##AK304016|OSMR|9180|oncostatin M receptor##BC063468|OSMR|9180|oncostatin M receptor##NM_001168355|OSMR|9180|oncostatin M receptor##DQ891672|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##DQ894858|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AK128358|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##CR749280|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AY515854|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC029608|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137163|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137164|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC144509|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##NM_152756|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AF198052|FYB|2533|FYN binding protein##U93049|FYB|2533|FYN binding protein##AF001862|FYB|2533|FYN binding protein	0.036922	
chr9	80828751	80828864	reg1021727.p2	6.324	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-182623	-	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	-565576	-	AK027023 TSC_hg19_v1_chr9_+_79968352	-860459	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	22223	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	83251	+	TSC_hg19_v1_chr9_+_82186879 NM_007005	1358079	+	AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.03685	
chr17	48758787	48758875	reg1023163.p1	6.323	+	TSC_hg19_v1_chr17_+_48712188 BC046126 NM_001144070 NM_003786 AF009670 Y17151 BC058907 AF085690 AF085691 AF085692 BC104952 BC137347 BC137348 AB208954 AF083552 AB010887 BC050370 AF104943 AB384796	-46622	+	TSC_hg19_v1_chr17_+_48638339 BC110995 AF124351 NM_018896 NM_198376 NM_198377 NM_198378 NM_198379 NM_198380 NM_198382 NM_198383 NM_198384 NM_198385 NM_198386 NM_198387 NM_198388 NM_198396 NM_198397	-120438	+	AK092731 TSC_hg19_v1_chr17_+_48624553 BC111029 AK025000 AK225189 AK291805 BC025255 NM_022827 BC065526 AK308616	-134273	+	AK314010 CR627413 TSC_hg19_v1_chr17_-_48785180 BC012978 EU164539 NM_052855	26312	-	TSC_hg19_v1_chr17_+_48796963 NM_006107 NM_016424 AK290540 AK225980 AK023672 BC047043 BC056409 BC002925 AK295983 DQ013876 AK001925	38162	+	AF147357 TSC_hg19_v1_chr17_+_48821111	62279	+	BC046126|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_001144070|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_003786|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF009670|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##Y17151|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC058907|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085690|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085691|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085692|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC104952|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137347|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137348|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB208954|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF083552|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB010887|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC050370|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF104943|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##AK092731|SPATA20|64847|spermatogenesis associated 20##BC111029|SPATA20|64847|spermatogenesis associated 20##AK025000|SPATA20|64847|spermatogenesis associated 20##AK225189|SPATA20|64847|spermatogenesis associated 20##AK291805|SPATA20|64847|spermatogenesis associated 20##BC025255|SPATA20|64847|spermatogenesis associated 20##NM_022827|SPATA20|64847|spermatogenesis associated 20##BC065526|SPATA20|64847|spermatogenesis associated 20##AK308616|SPATA20|64847|spermatogenesis associated 20##AK314010|ANKRD40|91369|ankyrin repeat domain 40##CR627413|ANKRD40|91369|ankyrin repeat domain 40##BC012978|ANKRD40|91369|ankyrin repeat domain 40##EU164539|ANKRD40|91369|ankyrin repeat domain 40##NM_052855|ANKRD40|91369|ankyrin repeat domain 40##NM_006107|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_016424|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK290540|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK225980|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK023672|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC047043|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC056409|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC002925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK295983|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##DQ013876|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK001925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)	0.489857	CTCF.p2:15:0.490
chr18	13630056	13630236	reg1000188.p1	6.323	+	AF009426 AF009427 NM_004338 NM_181483	-9280	+	NM_001003674 NM_001003675	-18482	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-411361	+	TSC_hg19_v1_chr18_-_13726549 AK055618	96360	-	TSC_hg19_v1_chr18_-_13726582 AK309506 NM_001098801 NM_152352	96440	-	TSC_hg19_v1_chr18_+_13726671 AK296370 BC017816 BX647977 AK303842 BC005290 AK292561 AB007858 AF067791 NM_003799 AB020966 BC036798	96544	+	AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A##AK309506|FAM210A|125228|family with sequence similarity 210, member A##NM_001098801|FAM210A|125228|family with sequence similarity 210, member A##NM_152352|FAM210A|125228|family with sequence similarity 210, member A##AK296370|RNMT|8731|RNA (guanine-7-) methyltransferase##BC017816|RNMT|8731|RNA (guanine-7-) methyltransferase##BX647977|RNMT|8731|RNA (guanine-7-) methyltransferase##AK303842|RNMT|8731|RNA (guanine-7-) methyltransferase##BC005290|RNMT|8731|RNA (guanine-7-) methyltransferase##AK292561|RNMT|8731|RNA (guanine-7-) methyltransferase##AB007858|RNMT|8731|RNA (guanine-7-) methyltransferase##AF067791|RNMT|8731|RNA (guanine-7-) methyltransferase##NM_003799|RNMT|8731|RNA (guanine-7-) methyltransferase##AB020966|RNMT|8731|RNA (guanine-7-) methyltransferase##BC036798|RNMT|8731|RNA (guanine-7-) methyltransferase	0.0	
chr11	102926045	102926152	reg1021064.p2	6.322	+	AY256443 AY256444 HQ258010 X75308 BC067522 BC067523 BC074807 BC074808 AK315341 X81334 AK222748 AK292211 NM_002427	-99651	-	AB590529 HQ258263 L23808 AK313959 BC112301 BC143773 NM_002426	-180384	-	DQ399598 CU686970 J03209 X05232 BC074815 BC074869 BC105954 BC107490 BC107491 AK313310 AK223283 AK223291 TSC_hg19_v1_chr11_-_102714339 BC069676 BC069716 NM_002422	-211802	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	36643	-	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	36825	-	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	54101	+	AY256443|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AY256444|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##HQ258010|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##X75308|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC067522|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC067523|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC074807|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC074808|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK315341|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##X81334|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK222748|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK292211|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##NM_002427|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##HQ258263|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##L23808|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##AK313959|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##BC112301|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##BC143773|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##NM_002426|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##DQ399598|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##J03209|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##X05232|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074815|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074869|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC105954|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107490|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107491|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK313310|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223283|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223291|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069676|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069716|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##NM_002422|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1	0.588256	CTCF.p2:-9:0.588
chr1	111764301	111764468	reg1002351.p1	6.322	+	TSC_hg19_v1_chr1_-_111747005 AK026110	-17409	-	TSC_hg19_v1_chr1_-_111743297 AK301583	-21074	-	TSC_hg19_v1_chr1_-_111743272 BC004557 NM_024901	-21114	-	NM_001025197 NM_004000 U58514 U49835 BC011460 BT006767 DQ893705 CU679936	5932	+	NM_001025199 U58515 AK298466 AK223316	8008	+	AK290702 AB025008 AB025009 AY825504 NM_021797 AF290004 AY789444 NM_201653	69121	+	AK026110|DENND2D|79961|DENN/MADD domain containing 2D##AK301583|DENND2D|79961|DENN/MADD domain containing 2D##BC004557|DENND2D|79961|DENN/MADD domain containing 2D##NM_024901|DENND2D|79961|DENN/MADD domain containing 2D##NM_001025197|CHI3L2|1117|chitinase 3-like 2##NM_004000|CHI3L2|1117|chitinase 3-like 2##U58514|CHI3L2|1117|chitinase 3-like 2##U49835|CHI3L2|1117|chitinase 3-like 2##BC011460|CHI3L2|1117|chitinase 3-like 2##BT006767|CHI3L2|1117|chitinase 3-like 2##DQ893705|CHI3L2|1117|chitinase 3-like 2##NM_001025199|CHI3L2|1117|chitinase 3-like 2##U58515|CHI3L2|1117|chitinase 3-like 2##AK298466|CHI3L2|1117|chitinase 3-like 2##AK223316|CHI3L2|1117|chitinase 3-like 2##AK290702|CHIA|27159|chitinase, acidic##AB025008|CHIA|27159|chitinase, acidic##AB025009|CHIA|27159|chitinase, acidic##AY825504|CHIA|27159|chitinase, acidic##NM_021797|CHIA|27159|chitinase, acidic##AF290004|CHIA|27159|chitinase, acidic##AY789444|CHIA|27159|chitinase, acidic##NM_201653|CHIA|27159|chitinase, acidic	0.0	
chr8	54654809	54654911	reg1020794.p2	6.321	+	BC099912 AK310407 AY168006 NM_000912 AY466378	-490648	-	BC069117 BC107101 NM_005285	-802393	+	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	-1027847	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	100819	-	AK022345 TSC_hg19_v1_chr8_-_54755834	100967	-	AF113222 TSC_hg19_v1_chr8_-_54755840 NM_015941 NM_213619 AK303229	100992	-	BC099912|OPRK1|4986|opioid receptor, kappa 1##AK310407|OPRK1|4986|opioid receptor, kappa 1##AY168006|OPRK1|4986|opioid receptor, kappa 1##NM_000912|OPRK1|4986|opioid receptor, kappa 1##AY466378|OPRK1|4986|opioid receptor, kappa 1##BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF113222|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_015941|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213619|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK303229|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H	0.870717	CTCF.p2:-4:0.871
chrX	40433162	40433271	reg1022218.p1	6.321	+	BC114220 NM_001123383 NM_001123384	-396635	-	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	-476524	-	TSC_hg19_v1_chrX_+_38663536 AK001248	-1769676	+	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	6970	+	AF291814 TSC_hg19_v1_chrX_+_40440231 AK293510 BC084541 AK297007 AF109363	7026	+	TSC_hg19_v1_chrX_+_40440264 AK314633 AK315948	7056	+	BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF291814|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK293510|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##BC084541|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK297007|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF109363|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK314633|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK315948|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.680477	CTCF.p2:28:0.680
chr8	118050211	118050341	reg1020861.p1	6.320	+	AK298294 NM_001172813 NM_001172815 AL713790	-87073	+	EF560713 NM_001172811	-87765	+	BC140924 BC142621 NM_001025357 AB463771 AB181519	-99817	+	NM_001172814 NM_173851	97060	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	482682	+	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	482766	+	AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##EF560713|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172811|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##BC140924|C8orf85|441376|chromosome 8 open reading frame 85##BC142621|C8orf85|441376|chromosome 8 open reading frame 85##NM_001025357|C8orf85|441376|chromosome 8 open reading frame 85##AB181519|C8orf85|441376|chromosome 8 open reading frame 85##NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_080651|MED30|90390|mediator complex subunit 30##BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30	0.740172	CTCF.p2:32:0.740
chr8	95397385	95397485	reg1022411.p1	6.320	+	TSC_hg19_v1_chr8_-_95274548 AK314017 BC022010 NM_005261 NM_181702	-122887	-	U10550 TSC_hg19_v1_chr8_-_95274525	-122913	-	AK312873 NM_001144663	-167905	-	AF007866 NM_001205263	51720	-	BC001965 AF112481 BC020668 AK290437 TSC_hg19_v1_chr8_-_95487344 NM_001205262 NM_012415	89884	-	AB037850 AF116724 HQ258534 TSC_hg19_v1_chr8_-_95565696 AL832487 BC112288 BC113380 NM_015496 NM_183009	168272	-	AK314017|GEM|2669|GTP binding protein overexpressed in skeletal muscle##BC022010|GEM|2669|GTP binding protein overexpressed in skeletal muscle##NM_005261|GEM|2669|GTP binding protein overexpressed in skeletal muscle##NM_181702|GEM|2669|GTP binding protein overexpressed in skeletal muscle##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205262|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AB037850|KIAA1429|25962|KIAA1429##AF116724|KIAA1429|25962|KIAA1429##AL832487|KIAA1429|25962|KIAA1429##BC112288|KIAA1429|25962|KIAA1429##BC113380|KIAA1429|25962|KIAA1429##NM_015496|KIAA1429|25962|KIAA1429##NM_183009|KIAA1429|25962|KIAA1429	0.555903	CTCF.p2:-1:0.556
chr1	108325083	108325242	reg1006204.p2	6.319	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	-94038	-	AB023193 TSC_hg19_v1_chr1_+_107683657	-641558	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-642420	+	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	182438	-	AJ619961 NM_213651 AK292567	410234	-	AF123303 EU832524 EU832606 AJ619987 TSC_hg19_v1_chr1_-_108742797 AK316506	417608	-	AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.0	
chr1	206899043	206899183	reg1006548.p1	6.319	+	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-40642	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-90003	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	-90269	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	46766	-	AY040367 NM_153758 AB463800	73113	+	AF453946 NM_013371	103108	+	BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19	0.876898	CTCF.p2:-9:0.877
chr14	64477237	64477386	reg1024363.p1	6.319	+	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	-157616	+	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	-282562	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	-368749	-	NM_182913 AY061758 AK297874	203566	+	NM_182910	205360	+	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	272352	-	NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)	0.454569	CTCF.p2:8:0.455
chr21	32515050	32515133	reg1021065.p1	6.319	+	AB096964 NM_001099219	-104297	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	-261233	-	AJ457063 AB096962 NM_181606	-313103	-	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	416267	-	TSC_hg19_v1_chr21_+_33032005 NM_000454 AK312116 BC001034 X02317 EF151142 AB464254 AY049787 AY450286 BT006676 CR450355 CR541742 CU674512 EF143990	516916	+	AB032998 AK025748 AL117417 TSC_hg19_v1_chr21_-_33074136	559027	-	AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##NM_000454|SOD1|6647|superoxide dismutase 1, soluble##AK312116|SOD1|6647|superoxide dismutase 1, soluble##BC001034|SOD1|6647|superoxide dismutase 1, soluble##X02317|SOD1|6647|superoxide dismutase 1, soluble##EF151142|SOD1|6647|superoxide dismutase 1, soluble##AY049787|SOD1|6647|superoxide dismutase 1, soluble##AY450286|SOD1|6647|superoxide dismutase 1, soluble##BT006676|SOD1|6647|superoxide dismutase 1, soluble##CR450355|SOD1|6647|superoxide dismutase 1, soluble##CR541742|SOD1|6647|superoxide dismutase 1, soluble##EF143990|SOD1|6647|superoxide dismutase 1, soluble##AB032998|SCAF4|57466|SR-related CTD-associated factor 4##AK025748|SCAF4|57466|SR-related CTD-associated factor 4##AL117417|SCAF4|57466|SR-related CTD-associated factor 4	0.0	
chr22	39164951	39165049	reg1022104.p1	6.319	+	TSC_hg19_v1_chr22_-_39152008 NM_001199579 NM_015374	-12979	-	TSC_hg19_v1_chr22_-_39151986 BC094797	-13008	-	BX537962 NM_001199580 TSC_hg19_v1_chr22_-_39151472	-13536	-	TSC_hg19_v1_chr22_-_39190131 AK290566 BC002968	25123	-	TSC_hg19_v1_chr22_-_39190149 AK223349 AK289744 AL035366 NM_005740	25175	-	TSC_hg19_v1_chr22_-_39239733 AB527378	74781	-	NM_001199579|SUN2|25777|Sad1 and UNC84 domain containing 2##NM_015374|SUN2|25777|Sad1 and UNC84 domain containing 2##BC094797|SUN2|25777|Sad1 and UNC84 domain containing 2##BX537962|SUN2|25777|Sad1 and UNC84 domain containing 2##NM_001199580|SUN2|25777|Sad1 and UNC84 domain containing 2##AK290566|DNAL4|10126|dynein, axonemal, light chain 4##BC002968|DNAL4|10126|dynein, axonemal, light chain 4##AK223349|DNAL4|10126|dynein, axonemal, light chain 4##AL035366|DNAL4|10126|dynein, axonemal, light chain 4##NM_005740|DNAL4|10126|dynein, axonemal, light chain 4	0.038684	
chr2	30915358	30915507	reg1023996.p1	6.319	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	-245284	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-460930	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-545556	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	114861	-	AK122747 NM_001253827	437065	-	AY358758 AK225808 TSC_hg19_v1_chr2_-_31361308	445866	-	BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AY358758|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AK225808|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.047241	
chr8	125049345	125049438	reg1004741.p1	6.319	+	AB196633 NM_001039112	-185165	+	TSC_hg19_v1_chr8_+_124780758 DQ228141 NM_144963 BC144630	-268578	+	TSC_hg19_v1_chr8_+_124780681 AK300603 BC030520	-268701	+	BC101502 BC101506 AK057332 TSC_hg19_v1_chr8_-_125183771	134347	-	TSC_hg19_v1_chr8_-_125384925 BC041379 NM_194291	335561	-	TSC_hg19_v1_chr8_+_125463060 NM_017956 AK225083 AK000779 AK222727 BC011713 BC003057	413681	+	AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)##DQ228141|FAM91A1|157769|family with sequence similarity 91, member A1##NM_144963|FAM91A1|157769|family with sequence similarity 91, member A1##BC144630|FAM91A1|157769|family with sequence similarity 91, member A1##AK300603|FAM91A1|157769|family with sequence similarity 91, member A1##BC030520|FAM91A1|157769|family with sequence similarity 91, member A1##BC101502|C8orf78|157376|chromosome 8 open reading frame 78##BC101506|C8orf78|157376|chromosome 8 open reading frame 78##AK057332|C8orf78|157376|chromosome 8 open reading frame 78##BC041379|TMEM65|157378|transmembrane protein 65##NM_194291|TMEM65|157378|transmembrane protein 65##NM_017956|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK225083|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK000779|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK222727|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC011713|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC003057|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)	0.07551	
chrX	81213477	81213593	reg1022651.p1	6.319	+	TSC_hg19_v1_chrX_+_80457600 BC016709 AL136718 AK129610 AF042081 AK310011 AB590910 CR533478	-755887	+	TSC_hg19_v1_chrX_+_80457572 AK309351	-755959	+	AK094058 AX748432 NM_030763	-756095	-	AK314967 NM_000307 TSC_hg19_v1_chrX_+_82763302 X82324 AB464667	1549764	+	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	1902636	+	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	2229437	-	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5##AK314967|POU3F4|5456|POU class 3 homeobox 4##NM_000307|POU3F4|5456|POU class 3 homeobox 4##X82324|POU3F4|5456|POU class 3 homeobox 4##BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	0.99518	CTCF.p2:5:0.995
chr12	106543020	106543128	reg1020025.p1	6.318	+	AB011109 BC152462 NM_014840	-9264	-	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	-10392	-	AJ311378 TSC_hg19_v1_chr12_+_105724640	-818435	+	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	98773	-	TSC_hg19_v1_chr12_+_106696595 BC033617 NM_152772 BC017872 AF306671 AF306858 AK314055	153498	+	NM_018082 TSC_hg19_v1_chr12_+_106751498 BX537447	208396	+	AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AJ311378|C12orf75|387882|chromosome 12 open reading frame 75##BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4##BC033617|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_152772|TCP11L2|255394|t-complex 11 (mouse)-like 2##BC017872|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306671|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306858|TCP11L2|255394|t-complex 11 (mouse)-like 2##AK314055|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	0.500732	CTCF.p2:4:0.501
chr4	181370653	181370774	reg1022897.p2	6.318	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-3007070	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-3007120	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-3007172	-	TSC_hg19_v1_chr4_+_183065111 AK308489	1694412	+	NM_001080477 HE578284 HE578285	1874441	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	2467817	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.116457	
chr11	131564839	131564949	reg1022675.p2	6.317	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-324425	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-778506	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-778549	-	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	215730	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	216445	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	1248120	-	NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.999836	CTCF.p2:5:1.000
chr13	31773997	31774105	reg1022604.p1	6.317	+	AB003333 TSC_hg19_v1_chr13_-_31736042 BC037553 AB003334 D86956 BC018124 AK314576 AK293955 NM_006644 AK302294 AK303029 AK311464 AK307597	-37948	-	CU691504 DQ891727 DQ894904 AF039695 TSC_hg19_v1_chr13_-_31735849	-38257	-	TSC_hg19_v1_chr13_+_31506809 BC030277 NM_152325 CU688876	-267221	+	TSC_hg19_v1_chr13_+_31774111 NM_194318	52	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	159	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	539662	+	AB003333|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC037553|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AB003334|HSPH1|10808|heat shock 105kDa/110kDa protein 1##D86956|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC018124|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK314576|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK293955|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_006644|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK302294|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK303029|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK311464|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK307597|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ891727|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ894904|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AF039695|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC030277|C13orf26|122046|chromosome 13 open reading frame 26##NM_152325|C13orf26|122046|chromosome 13 open reading frame 26##NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2	0.986376	CTCF.p2:7:0.986
chr16	50299222	50299364	reg1023277.p1	6.317	+	TSC_hg19_v1_chr16_+_50186838 AK300918 NM_001040284 NM_001040285	-112458	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	-199333	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	-199400	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	1183	+	TSC_hg19_v1_chr16_+_50308041 BC039891	8760	+	NM_001114 D25538	22530	+	AK300918|PAPD5|64282|PAP associated domain containing 5##NM_001040284|PAPD5|64282|PAP associated domain containing 5##NM_001040285|PAPD5|64282|PAP associated domain containing 5##AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK093706|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7	0.997194	CTCF.p2:14:0.997
chr17	27579347	27579456	reg1023755.p2	6.317	+	NM_005208 BC113693 BC069537 CU686900 HQ258110	-5524	+	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	-72051	-	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	-111990	-	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	41709	-	TSC_hg19_v1_chr17_-_27621167 AK293075 NM_020772	41764	-	NM_020791 NM_025142 BC133039 BC144067	138544	+	NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1##CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020791|TAOK1|57551|TAO kinase 1##NM_025142|TAOK1|57551|TAO kinase 1##BC133039|TAOK1|57551|TAO kinase 1##BC144067|TAOK1|57551|TAO kinase 1	0.935721	CTCF.p2:2:0.936
chr11	117350215	117350356	reg1023136.p1	6.316	+	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-151454	+	TSC_hg19_v1_chr11_+_117198594 BX648682 NM_014956 BC054015	-151701	+	TSC_hg19_v1_chr11_-_117186973 AF324837 AB032975 AF201468 AF190725 BC036084 AK075049 BC065492 NM_012104 NM_138971 NM_138972 NM_138973	-163305	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	317568	-	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	317674	-	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	345149	-	AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##BX648682|CEP164|22897|centrosomal protein 164kDa##NM_014956|CEP164|22897|centrosomal protein 164kDa##BC054015|CEP164|22897|centrosomal protein 164kDa##AF324837|BACE1|23621|beta-site APP-cleaving enzyme 1##AB032975|BACE1|23621|beta-site APP-cleaving enzyme 1##AF201468|BACE1|23621|beta-site APP-cleaving enzyme 1##AF190725|BACE1|23621|beta-site APP-cleaving enzyme 1##BC036084|BACE1|23621|beta-site APP-cleaving enzyme 1##AK075049|BACE1|23621|beta-site APP-cleaving enzyme 1##BC065492|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_012104|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138971|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138972|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138973|BACE1|23621|beta-site APP-cleaving enzyme 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2	0.0	
chr11	12310250	12310413	reg1021201.p1	6.316	+	AK123671 NM_032867	-1885	+	TSC_hg19_v1_chr11_+_12132122 BC044577 NM_014632 BC015755 AB018293	-178201	+	TSC_hg19_v1_chr11_-_12030884 AB057591 NM_013253	-279429	-	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	88778	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	385632	+	TSC_hg19_v1_chr11_+_12960793 AK075236	650480	+	AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##BC044577|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_014632|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##BC015755|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB018293|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB057591|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_013253|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)	0.825757	CTCF.p2:-7:0.826
chr1	146057320	146057466	reg1023164.p1	6.315	+	NM_001097616	-173526	+	BT006679 DQ890650 DQ893830 AB528816 TSC_hg19_v1_chr1_-_145827047 BC003187 AK316371 BC146880 AF132947 U78723 BC067816 AB097024 AB097025 AK223223 AK299995 AK302266 AY358966 AK021758 AK297145 NM_001097612 NM_001097613	-230377	-	TSC_hg19_v1_chr1_+_145727712 AK313100 AK298269 BC006496 BC006518 AF012281	-329674	+	AF419617 NM_001101663	10851	-	BC136292 NM_183372 AL832622	25305	-	AJ224538 HQ257946 TSC_hg19_v1_chr1_-_146643798	586372	-	NM_001097616|GPR89C|728932|G protein-coupled receptor 89C##BT006679|GPR89A|653519|G protein-coupled receptor 89A##DQ890650|GPR89B|51463|G protein-coupled receptor 89B##DQ893830|GPR89A|653519|G protein-coupled receptor 89A##BC003187|GPR89A|653519|G protein-coupled receptor 89A##AK316371|GPR89A|653519|G protein-coupled receptor 89A##BC146880|GPR89A|653519|G protein-coupled receptor 89A##AF132947|GPR89A|653519|G protein-coupled receptor 89A##U78723|GPR89B|51463|G protein-coupled receptor 89B##BC067816|GPR89A|653519|G protein-coupled receptor 89A##AB097024|GPR89A|653519|G protein-coupled receptor 89A##AB097025|GPR89A|653519|G protein-coupled receptor 89A##AK223223|GPR89A|653519|G protein-coupled receptor 89A##AK299995|GPR89A|653519|G protein-coupled receptor 89A##AK302266|GPR89B|51463|G protein-coupled receptor 89B##AY358966|GPR89A|653519|G protein-coupled receptor 89A##AK021758|GPR89A|653519|G protein-coupled receptor 89A##AK297145|GPR89A|653519|G protein-coupled receptor 89A##NM_001097612|GPR89A|653519|G protein-coupled receptor 89A##NM_001097613|GPR89A|653519|G protein-coupled receptor 89A##AK313100|PDZK1|5174|PDZ domain containing 1##AK298269|PDZK1|5174|PDZ domain containing 1##BC006496|PDZK1|5174|PDZ domain containing 1##BC006518|PDZK1|5174|PDZ domain containing 1##AF012281|PDZK1|5174|PDZ domain containing 1##AF419617|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_001101663|NBPF24|728912|neuroblastoma breakpoint family, member 24##BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##AJ224538|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##HQ257946|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	0.389166	CTCF.p2:-22:0.389
chr4	124582419	124582544	reg1023127.p1	6.315	+	AK026960 BC063856 NM_005841	-261808	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-264525	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-738229	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	1051333	-	NM_024582	1655085	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	3971658	+	AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	0.749837	CTCF.p2:-5:0.750
chr5	143562986	143563098	reg1021166.p1	6.315	+	AK292477 CR749266 NM_020768	-12627	+	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	-12796	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	-12866	-	TSC_hg19_v1_chr5_-_145214906 BC028175 AK095695 AK125215 NM_182960 NM_205846 BC012033 NM_138492	1651846	-	NM_001080516	1689488	-	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	1753129	+	AK292477|KCTD16|57528|potassium channel tetramerisation domain containing 16##CR749266|KCTD16|57528|potassium channel tetramerisation domain containing 16##NM_020768|KCTD16|57528|potassium channel tetramerisation domain containing 16##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC028175|PRELID2|153768|PRELI domain containing 2##AK095695|PRELID2|153768|PRELI domain containing 2##AK125215|PRELID2|153768|PRELI domain containing 2##NM_182960|PRELID2|153768|PRELI domain containing 2##NM_205846|PRELID2|153768|PRELI domain containing 2##BC012033|PRELID2|153768|PRELI domain containing 2##NM_138492|PRELID2|153768|PRELI domain containing 2##NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2	0.977518	CTCF.p2:4:0.978
chr13	33017373	33017491	reg1022467.p2	6.314	+	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	-15074	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	-127815	+	BC146956 BC146965 NM_001136571	-131343	-	Z36834 TSC_hg19_v1_chr13_-_33112933 BC010643 U50532 AL049783 AK298546 AK312924 NM_014887 NM_033111	95493	-	TSC_hg19_v1_chr13_+_33160588 NM_015032	143131	+	TSC_hg19_v1_chr13_+_33160610 AL137201	143186	+	BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##Z36834|N4BP2L2|10443|NEDD4 binding protein 2-like 2##BC010643|N4BP2L2|10443|NEDD4 binding protein 2-like 2##U50532|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AL049783|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK298546|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK312924|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_014887|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_033111|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_015032|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.962405	CTCF.p2:-1:0.962
chr14	63506644	63506772	reg1024129.p2	6.314	+	TSC_hg19_v1_chr14_+_62584125 BX248751	-922550	+	AJ617628 NM_031914 BC117363 BC143598 HQ258344 AB102949	-1044070	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	-1277589	+	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	5221	-	AK074484 NM_172376	61875	-	NM_020663 AF087862 AK027351 AK027278 BC062575 AB209218 AF309563	164473	+	BX248751|FLJ43390|646113|uncharacterized LOC646113##AJ617628|SYT16|83851|synaptotagmin XVI##NM_031914|SYT16|83851|synaptotagmin XVI##BC117363|SYT16|83851|synaptotagmin XVI##BC143598|SYT16|83851|synaptotagmin XVI##HQ258344|SYT16|83851|synaptotagmin XVI##AB102949|SYT16|83851|synaptotagmin XVI##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AK074484|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172376|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_020663|RHOJ|57381|ras homolog gene family, member J##AF087862|RHOJ|57381|ras homolog gene family, member J##AK027351|RHOJ|57381|ras homolog gene family, member J##AK027278|RHOJ|57381|ras homolog gene family, member J##BC062575|RHOJ|57381|ras homolog gene family, member J##AB209218|RHOJ|57381|ras homolog gene family, member J##AF309563|RHOJ|57381|ras homolog gene family, member J	0.960235	CTCF.p2:-10:0.960
chr2	30698526	30698671	reg1024501.p1	6.314	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	-28450	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-244096	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-328722	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	331695	-	AK122747 NM_001253827	653899	-	AY358758 AK225808 TSC_hg19_v1_chr2_-_31361308	662700	-	BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AY358758|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AK225808|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.364663	CTCF.p2:17:0.365
chr14	64760991	64761098	reg1000436.p1	6.313	+	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	-11381	-	NM_182910	-78373	+	NM_182913 AY061758 AK297874	-80167	+	AF051427 AF051428 AF060555 NM_001040275 NM_001437	58	-	NM_001040276 BX247957 TSC_hg19_v1_chr14_-_64805347	44314	-	AK302747 NM_005956	93709	+	AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF051427|ESR2|2100|estrogen receptor 2 (ER beta)##AF051428|ESR2|2100|estrogen receptor 2 (ER beta)##AF060555|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001040275|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001437|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001040276|ESR2|2100|estrogen receptor 2 (ER beta)##BX247957|ESR2|2100|estrogen receptor 2 (ER beta)##AK302747|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_005956|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase	0.052582	
chr20	39574695	39574814	reg1021300.p1	6.313	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-256877	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-1983765	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-2019686	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	82740	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	82910	+	TSC_hg19_v1_chr20_+_39765861 AB210028	191108	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.918729	CTCF.p2:26:0.919
chr5	76373507	76373607	reg1020531.p1	6.313	+	TSC_hg19_v1_chr5_+_76326341 BC002828 U84971 AY500994 BC073864 CU689558	-47023	+	TSC_hg19_v1_chr5_+_76326231 NM_018046 BC032844	-47331	+	NM_001882 AK223457 AK307729 BC018038 AK311052 X58022 CU676144 CR541666	-124738	+	TSC_hg19_v1_chr5_+_76382539 AK311179	8967	+	TSC_hg19_v1_chr5_-_76383029 BC007239 NM_032367 AK223624	9486	-	AK098256 TSC_hg19_v1_chr5_+_76435100	61529	+	BC002828|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##U84971|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##AY500994|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##BC073864|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##NM_018046|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##BC032844|AGGF1|55109|angiogenic factor with G patch and FHA domains 1##NM_001882|CRHBP|1393|corticotropin releasing hormone binding protein##AK223457|CRHBP|1393|corticotropin releasing hormone binding protein##AK307729|CRHBP|1393|corticotropin releasing hormone binding protein##BC018038|CRHBP|1393|corticotropin releasing hormone binding protein##AK311052|CRHBP|1393|corticotropin releasing hormone binding protein##X58022|CRHBP|1393|corticotropin releasing hormone binding protein##CR541666|CRHBP|1393|corticotropin releasing hormone binding protein##AK311179|LOC728723|728723|uncharacterized LOC728723##BC007239|ZBED3|84327|zinc finger, BED-type containing 3##NM_032367|ZBED3|84327|zinc finger, BED-type containing 3##AK223624|ZBED3|84327|zinc finger, BED-type containing 3	1.022295	CTCF.p2:25:0.942
chrX	144272444	144272580	reg1022886.p1	6.313	+	GU727624 NM_001012989	-1305340	+	NM_001009615	-1467997	-	TSC_hg19_v1_chrX_-_142723922 NM_001184749	-1548589	-	DQ336118 DQ336119 DQ336120 DQ336121 NM_001009614	56594	+	TSC_hg19_v1_chrX_+_144899439 NM_001144003 NM_001144004 NM_001144005 NM_032539 AK096278 CR627412 AK289732	626901	+	NM_001144006 NM_001144008 NM_001144009 NM_001144010 BC113011 BC113012 TSC_hg19_v1_chrX_+_144903056	630452	+	GU727624|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like##NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like##NM_001009615|SPANXN2|494119|SPANX family, member N2##NM_001184749|SLITRK4|139065|SLIT and NTRK-like family, member 4##DQ336118|SPANXN1|494118|SPANX family, member N1##DQ336119|SPANXN1|494118|SPANX family, member N1##DQ336120|SPANXN1|494118|SPANX family, member N1##DQ336121|SPANXN1|494118|SPANX family, member N1##NM_001009614|SPANXN1|494118|SPANX family, member N1##NM_001144003|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144004|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144005|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_032539|SLITRK2|84631|SLIT and NTRK-like family, member 2##AK096278|SLITRK2|84631|SLIT and NTRK-like family, member 2##CR627412|SLITRK2|84631|SLIT and NTRK-like family, member 2##AK289732|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144006|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144008|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144009|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144010|SLITRK2|84631|SLIT and NTRK-like family, member 2##BC113011|SLITRK2|84631|SLIT and NTRK-like family, member 2##BC113012|SLITRK2|84631|SLIT and NTRK-like family, member 2	0.991555	CTCF.p2:27:0.992
chr15	81549452	81549591	reg1025775.p1	6.312	+	NM_172217 AY324389	-31832	+	AK124725 NM_001172128 AK124565 AK131530	-60303	+	AK302120 BC062471 NM_173528 AK307565	-122894	+	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	39783	+	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	66973	-	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	116964	-	NM_172217|IL16|3603|interleukin 16##AY324389|IL16|3603|interleukin 16##AK124725|IL16|3603|interleukin 16##NM_001172128|IL16|3603|interleukin 16##AK124565|IL16|3603|interleukin 16##AK131530|IL16|3603|interleukin 16##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3	0.487236	CTCF.p2:-6:0.487
chr12	111332429	111332609	reg1001961.p2	6.311	+	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-47716	+	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	-151763	-	TSC_hg19_v1_chr12_-_111180641 X74008 BC014073	-151863	-	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	25859	-	BC151245 NM_015267 AB006631 AF271236	139353	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	474327	-	AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##X74008|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC014073|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A	0.0	
chr18	47883054	47883208	reg1002971.p2	6.311	+	BX647189 NM_001101654 NM_014593	-68440	-	AB031069 AF149758 AK314886 TSC_hg19_v1_chr18_-_47814205 AK294645	-68924	-	TSC_hg19_v1_chr18_-_47814047 BC002504 BC014940	-69095	-	TSC_hg19_v1_chr18_+_47901415 NM_001039535 NM_145060 BC015706 AK313968 AK303464	18266	+	TSC_hg19_v1_chr18_+_48086463 BC050299 NM_002747 AK293818 BC040493 AK295058	203366	+	AB042647 AK054702 AK295666 NM_001127175 NM_001127176 NM_031939	463234	-	BX647189|CXXC1|30827|CXXC finger protein 1##NM_001101654|CXXC1|30827|CXXC finger protein 1##NM_014593|CXXC1|30827|CXXC finger protein 1##AB031069|CXXC1|30827|CXXC finger protein 1##AF149758|CXXC1|30827|CXXC finger protein 1##AK314886|CXXC1|30827|CXXC finger protein 1##AK294645|CXXC1|30827|CXXC finger protein 1##BC002504|CXXC1|30827|CXXC finger protein 1##BC014940|CXXC1|30827|CXXC finger protein 1##NM_001039535|SKA1|220134|spindle and kinetochore associated complex subunit 1##NM_145060|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC015706|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK313968|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK303464|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC050299|MAPK4|5596|mitogen-activated protein kinase 4##NM_002747|MAPK4|5596|mitogen-activated protein kinase 4##AK293818|MAPK4|5596|mitogen-activated protein kinase 4##BC040493|MAPK4|5596|mitogen-activated protein kinase 4##AK295058|MAPK4|5596|mitogen-activated protein kinase 4##AB042647|MRO|83876|maestro##AK054702|MRO|83876|maestro##AK295666|MRO|83876|maestro##NM_001127175|MRO|83876|maestro##NM_001127176|MRO|83876|maestro##NM_031939|MRO|83876|maestro	0.0	
chr20	39707108	39707212	reg1021887.p1	6.311	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	-49496	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	-49666	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-389283	-	TSC_hg19_v1_chr20_+_39765861 AB210028	58702	+	TSC_hg19_v1_chr20_+_39766146 NM_002660 NM_182811 BC136466 BC144136 M34667	59028	+	TSC_hg19_v1_chr20_-_39766625 BC035080	59448	-	BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##AB210028|PLCG1|5335|phospholipase C, gamma 1##NM_002660|PLCG1|5335|phospholipase C, gamma 1##NM_182811|PLCG1|5335|phospholipase C, gamma 1##BC136466|PLCG1|5335|phospholipase C, gamma 1##BC144136|PLCG1|5335|phospholipase C, gamma 1##M34667|PLCG1|5335|phospholipase C, gamma 1	0.595146	CTCF.p2:11:0.595
chr2	171226534	171226699	reg1021182.p1	6.311	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	-191931	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-542658	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-545231	-	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	345242	+	TSC_hg19_v1_chr2_+_171571942 AB464708	345361	+	TSC_hg19_v1_chr2_+_171572707 BC069026	346094	+	AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##BC069026|SP5|389058|Sp5 transcription factor	0.816241	CTCF.p2:-14:0.816
chr2	37515242	37515383	reg1026370.p1	6.311	+	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-56466	+	NM_001083946 NM_144736 TSC_hg19_v1_chr2_+_37458800 AK303555 AK299015 BC065206 BC004548	-56522	+	TSC_hg19_v1_chr2_-_37458740 M37197 AK312322 NM_005760 BC034475	-56584	-	BC030706 BC012820 AB015982 NM_005813	28881	-	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	56501	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	383467	-	BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##NM_001083946|C2orf56|55471|chromosome 2 open reading frame 56##NM_144736|C2orf56|55471|chromosome 2 open reading frame 56##AK303555|C2orf56|55471|chromosome 2 open reading frame 56##AK299015|C2orf56|55471|chromosome 2 open reading frame 56##BC065206|C2orf56|55471|chromosome 2 open reading frame 56##BC004548|C2orf56|55471|chromosome 2 open reading frame 56##M37197|CEBPZ|10153|CCAAT/enhancer binding protein (C/EBP), zeta##AK312322|CEBPZ|10153|CCAAT/enhancer binding protein (C/EBP), zeta##NM_005760|CEBPZ|10153|CCAAT/enhancer binding protein (C/EBP), zeta##BC034475|CEBPZ|10153|CCAAT/enhancer binding protein (C/EBP), zeta##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	0.0	
chr3	94055335	94055459	reg1023454.p2	6.311	+	AK122674 NM_001195643	-273331	-	TSC_hg19_v1_chr3_+_93781863 AF169972 BC018432 BC020602 BC057238 NM_022072 AK026262	-273553	+	BC045541 TSC_hg19_v1_chr3_-_93781761 AL832912 BC063379 NM_176815	-273653	-	NM_001080448 TSC_hg19_v1_chr3_+_96533435 AK092565 AX747601	2478033	+	AK302040 AK310249 BC031881 BC067287 AK302080 AL133666 NM_173655	3103074	+	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	3428203	+	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1##AF169972|NSUN3|63899|NOP2/Sun domain family, member 3##BC018432|NSUN3|63899|NOP2/Sun domain family, member 3##BC020602|NSUN3|63899|NOP2/Sun domain family, member 3##BC057238|NSUN3|63899|NOP2/Sun domain family, member 3##NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3##AK026262|NSUN3|63899|NOP2/Sun domain family, member 3##BC045541|DHFRL1|200895|dihydrofolate reductase-like 1##AL832912|DHFRL1|200895|dihydrofolate reductase-like 1##BC063379|DHFRL1|200895|dihydrofolate reductase-like 1##NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001080448|EPHA6|285220|EPH receptor A6##AK092565|EPHA6|285220|EPH receptor A6##AK302040|EPHA6|285220|EPH receptor A6##AK310249|EPHA6|285220|EPH receptor A6##BC031881|EPHA6|285220|EPH receptor A6##BC067287|EPHA6|285220|EPH receptor A6##AK302080|EPHA6|285220|EPH receptor A6##AL133666|EPHA6|285220|EPH receptor A6##NM_173655|EPHA6|285220|EPH receptor A6##BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6	0.0	
chr1	32098866	32099046	reg1021986.p2	6.310	+	BC035686 AK290521 NM_001525	-15663	+	AK027839 TSC_hg19_v1_chr1_+_32050592	-48402	+	NM_001204415 TSC_hg19_v1_chr1_+_32043786	-55189	+	CR542139 CU678186 CU680360 BC002773 AK301226 TSC_hg19_v1_chr1_-_32110478 AB018357 AB026628 BC012561 AY359011 AK001420	11519	-	NM_012392	11881	-	M92642 TSC_hg19_v1_chr1_-_32169608	70626	-	BC035686|HCRTR1|3061|hypocretin (orexin) receptor 1##AK290521|HCRTR1|3061|hypocretin (orexin) receptor 1##NM_001525|HCRTR1|3061|hypocretin (orexin) receptor 1##AK027839|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_001204415|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##CR542139|PEF1|553115|penta-EF-hand domain containing 1##BC002773|PEF1|553115|penta-EF-hand domain containing 1##AK301226|PEF1|553115|penta-EF-hand domain containing 1##AB018357|PEF1|553115|penta-EF-hand domain containing 1##AB026628|PEF1|553115|penta-EF-hand domain containing 1##BC012561|PEF1|553115|penta-EF-hand domain containing 1##AY359011|PEF1|553115|penta-EF-hand domain containing 1##AK001420|PEF1|553115|penta-EF-hand domain containing 1##NM_012392|PEF1|553115|penta-EF-hand domain containing 1##M92642|COL16A1|1307|collagen, type XVI, alpha 1	0.986164	CTCF.p2:-39:0.986
chr14	103161164	103161344	reg1005024.p2	6.310	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-102093	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	-102256	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-185140	-	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	82565	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	82646	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	227744	+	AF155595|RCOR1|23186|REST corepressor 1##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)	0.02996	
chr8	145550394	145550521	reg1021469.p1	6.310	+	DQ892286 DQ895486 TSC_hg19_v1_chr8_-_145550350 AB057815	-109	-	TSC_hg19_v1_chr8_+_145515472 AB463721 BT007351 DQ893859	-35003	+	TSC_hg19_v1_chr8_+_145515289 AK290975 BC014638	-35146	+	TSC_hg19_v1_chr8_-_145550516 BC150649	64	-	TSC_hg19_v1_chr8_-_145550553 AF059202 BC015762 BC023565 NM_012079	117	-	AB384867 AY014996 NM_031309	9429	-	DQ892286|DGAT1|8694|diacylglycerol O-acyltransferase 1##DQ895486|DGAT1|8694|diacylglycerol O-acyltransferase 1##AB057815|DGAT1|8694|diacylglycerol O-acyltransferase 1##BT007351|HSF1|3297|heat shock transcription factor 1##DQ893859|HSF1|3297|heat shock transcription factor 1##AK290975|HSF1|3297|heat shock transcription factor 1##BC014638|HSF1|3297|heat shock transcription factor 1##BC150649|DGAT1|8694|diacylglycerol O-acyltransferase 1##AF059202|DGAT1|8694|diacylglycerol O-acyltransferase 1##BC015762|DGAT1|8694|diacylglycerol O-acyltransferase 1##BC023565|DGAT1|8694|diacylglycerol O-acyltransferase 1##NM_012079|DGAT1|8694|diacylglycerol O-acyltransferase 1##AY014996|SCRT1|83482|scratch homolog 1, zinc finger protein (Drosophila)##NM_031309|SCRT1|83482|scratch homolog 1, zinc finger protein (Drosophila)	0.998157	CTCF.p2:-49:0.998
chr9	73540001	73540121	reg1023196.p1	6.310	+	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	-56101	-	D31716 S72504 NM_001206	-510506	-	AB451404 CU686806 AB464604 EU446889 TSC_hg19_v1_chr9_-_73028875 BC074879 BC074880 AK313631 BC069431	-511386	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	196475	-	AL136545 TSC_hg19_v1_chr9_-_74061901	521822	-	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	843517	-	BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##D31716|KLF9|687|Kruppel-like factor 9##S72504|KLF9|687|Kruppel-like factor 9##NM_001206|KLF9|687|Kruppel-like factor 9##AB451404|KLF9|687|Kruppel-like factor 9##EU446889|KLF9|687|Kruppel-like factor 9##BC074879|KLF9|687|Kruppel-like factor 9##BC074880|KLF9|687|Kruppel-like factor 9##AK313631|KLF9|687|Kruppel-like factor 9##BC069431|KLF9|687|Kruppel-like factor 9##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2	0.986887	CTCF.p2:-8:0.987
chr13	82054926	82055046	reg1023615.p1	6.309	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-1139922	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-1141944	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-1999431	+	TSC_hg19_v1_chr13_-_84456424 BC051738	2401439	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	2401514	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	4318453	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.0	
chr19	5794252	5794348	reg1019485.p1	6.309	+	TSC_hg19_v1_chr19_-_5791224 BC004549 AK315691 AK297037 NM_001161619 NM_020175	-3070	-	TSC_hg19_v1_chr19_-_5791185 BC009973	-3115	-	TSC_hg19_v1_chr19_-_5791173 AL365411 CU678764 EU832641 EU832718 AK023958 AK225840	-3257	-	AL161995 NM_004558	29517	+	TSC_hg19_v1_chr19_-_5838802 AF131211 AK098073 AK313130	44475	-	U27333 U27335 U27337 BC061700 BC040472 NM_000150 NM_001040701 TSC_hg19_v1_chr19_-_5839765	45434	-	BC004549|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK315691|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK297037|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##NM_001161619|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##NM_020175|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##BC009973|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AL365411|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##EU832641|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##EU832718|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK023958|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK225840|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AL161995|NRTN|4902|neurturin##NM_004558|NRTN|4902|neurturin##AF131211|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##AK098073|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##AK313130|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##U27333|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##U27335|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##U27337|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##BC061700|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##NM_000150|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##NM_001040701|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)	0.853973	CTCF.p2:9:0.854
chr3	50311852	50311949	reg1021814.p1	6.309	+	TSC_hg19_v1_chr3_+_50306602 BC013975 BC024220 AF217991 AB083186 EU832609 EU832680	-5274	+	AB209322 TSC_hg19_v1_chr3_+_50306434 U28369	-5528	+	AK308875 NM_001005914 NM_004636 TSC_hg19_v1_chr3_+_50305047	-6881	+	BC028000 NM_153215 AK095927 EU832119 EU832213	4630	+	U09585 BT019999 EU832626 EU832699 CU675591 TSC_hg19_v1_chr3_-_50329861 AK309114 BC001676 AK074763 BC001327 BC007265 BC007437 NM_006764	17963	-	TSC_hg19_v1_chr3_-_50336292 AF040706 NM_001200029 NM_001200018	24391	-	BC013975|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##BC024220|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##AF217991|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##AB083186|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##EU832609|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##EU832680|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##AB209322|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##U28369|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##AK308875|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##NM_001005914|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##NM_004636|SEMA3B|7869|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B##BC028000|C3orf45|132228|chromosome 3 open reading frame 45##NM_153215|C3orf45|132228|chromosome 3 open reading frame 45##AK095927|C3orf45|132228|chromosome 3 open reading frame 45##EU832119|C3orf45|132228|chromosome 3 open reading frame 45##EU832213|C3orf45|132228|chromosome 3 open reading frame 45##U09585|IFRD2|7866|interferon-related developmental regulator 2##BT019999|IFRD2|7866|interferon-related developmental regulator 2##EU832626|IFRD2|7866|interferon-related developmental regulator 2##EU832699|IFRD2|7866|interferon-related developmental regulator 2##AK309114|IFRD2|7866|interferon-related developmental regulator 2##BC001676|IFRD2|7866|interferon-related developmental regulator 2##AK074763|IFRD2|7866|interferon-related developmental regulator 2##BC001327|IFRD2|7866|interferon-related developmental regulator 2##BC007265|IFRD2|7866|interferon-related developmental regulator 2##BC007437|IFRD2|7866|interferon-related developmental regulator 2##NM_006764|IFRD2|7866|interferon-related developmental regulator 2##AF040706|NAT6|24142|N-acetyltransferase 6 (GCN5-related)##NM_001200029|HYAL3|8372|hyaluronoglucosaminidase 3##NM_001200018|NAT6|24142|N-acetyltransferase 6 (GCN5-related)	0.929935	CTCF.p2:2:0.930
chr10	71276167	71276255	reg1002892.p2	6.308	+	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	-64878	+	TSC_hg19_v1_chr10_+_71211220 NM_012339 BC003157 BC004161 AF120266	-64950	+	AK300649 BC033742 AK291996 NM_001057	-99591	-	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	56889	-	NM_145306 BC013587	113796	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	285446	+	NM_012339|TSPAN15|23555|tetraspanin 15##BC003157|TSPAN15|23555|tetraspanin 15##BC004161|TSPAN15|23555|tetraspanin 15##AF120266|TSPAN15|23555|tetraspanin 15##AK300649|TACR2|6865|tachykinin receptor 2##BC033742|TACR2|6865|tachykinin receptor 2##AK291996|TACR2|6865|tachykinin receptor 2##NM_001057|TACR2|6865|tachykinin receptor 2##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3##NM_145306|C10orf35|219738|chromosome 10 open reading frame 35##BC013587|C10orf35|219738|chromosome 10 open reading frame 35##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1	1.014787	CTCF.p2:-4:0.998
chr22	23053335	23053437	reg1021219.p1	6.308	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	-12868	+	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	-24183	+	TSC_hg19_v1_chr22_+_23010757 L29162	-42626	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	1496	+	TSC_hg19_v1_chr22_+_23063107 M18645 X53070 BC073786 X57805 X57813 AF026926 L35916 L35917 L35918 L35920 U43769 X64165 X64166 X54442	9745	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	81720	+	DQ896079|IGL@|3535|immunoglobulin lambda locus##BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3##L35918|IGLJ3|28831|immunoglobulin lambda joining 3	0.999972	CTCF.p2:3:1.000
chr3	181420001	181420113	reg1023065.p1	6.308	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-2665	+	NM_001190233 TSC_hg19_v1_chr3_-_180707525 AK311765 BC073989 BC009702 AK309019 AK307097 NM_145261	-712624	-	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	-789579	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	9656	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	10081	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	1091230	+	BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##NM_001190233|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK311765|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC073989|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC009702|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK307097|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##NM_145261|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B	0.985503	CTCF.p2:3:0.986
chr10	65875832	65875916	reg1021505.p1	6.307	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-594633	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-594712	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-594759	+	NM_178011 BX640611 AY358315 BC111492	2809941	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	3549522	-	AF091606 AK313882 NM_013266	3580063	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.169057	
chr13	113260601	113260782	reg1003062.p1	6.307	+	TSC_hg19_v1_chr13_-_113242484 AK314785	-18200	-	TSC_hg19_v1_chr13_-_113242468 BC046634 NM_006322	-18218	-	AJ003061 AJ003062 BT009772 CU680680 DQ891072 DQ894255 AF042378 TSC_hg19_v1_chr13_-_113242450 BC013781 AK302537 BC007763	-18319	-	TSC_hg19_v1_chr13_-_113260770 AK125472	76	-	AK129953 NM_207440	40666	+	TSC_hg19_v1_chr13_-_113344130 AK057085	83415	-	AK314785|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC046634|TUBGCP3|10426|tubulin, gamma complex associated protein 3##NM_006322|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AJ003061|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AJ003062|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BT009772|TUBGCP3|10426|tubulin, gamma complex associated protein 3##DQ891072|TUBGCP3|10426|tubulin, gamma complex associated protein 3##DQ894255|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AF042378|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC013781|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK302537|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC007763|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK129953|C13orf35|400165|chromosome 13 open reading frame 35##NM_207440|C13orf35|400165|chromosome 13 open reading frame 35##AK057085|LOC440149|440149|uncharacterized LOC440149	0.0	
chr14	77526023	77526115	reg1031040.p2	6.307	+	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-31009	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	-31385	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-233274	+	AK124327 TSC_hg19_v1_chr14_-_77542533	16464	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	38576	+	BC117676 TSC_hg19_v1_chr14_-_77608072	81946	-	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22	0.864621	CTCF.p2:-4:0.865
chr2	118906526	118906663	reg1026353.p1	6.307	+	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-60531	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-134861	-	TSC_hg19_v1_chr2_-_118771677 BC028609	-134910	-	NM_001426	699164	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	793226	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	1009810	-	AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC028609|CCDC93|54520|coiled-coil domain containing 93##NM_001426|EN1|2019|engrailed homeobox 1##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2	0.257492	CTCF.p2:11:0.257
chr4	107971821	107971949	reg1025632.p1	6.307	+	NM_014421 AF177395	-14433	-	NM_001195138	-683294	-	AK074305 NM_001163436	-734058	-	BC011392 AF016496 CR457028 CU690750 BC040940 TSC_hg19_v1_chr4_-_108641372 BC050627 AF033026 AK292774 AK297981 Y10387 BC032513 AF105227 NM_005443	669479	-	AK290344 NM_001136258 AF452717	773882	+	NM_001136257 NM_152621 BC028705 AK314049 BC041369	842539	+	NM_014421|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##AF177395|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like##AK074305|TBCK|93627|TBC1 domain containing kinase##NM_001163436|TBCK|93627|TBC1 domain containing kinase##BC011392|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF016496|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##CR457028|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC040940|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC050627|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF033026|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK292774|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK297981|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##Y10387|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC032513|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF105227|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##NM_005443|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK290344|SGMS2|166929|sphingomyelin synthase 2##NM_001136258|SGMS2|166929|sphingomyelin synthase 2##AF452717|SGMS2|166929|sphingomyelin synthase 2##NM_001136257|SGMS2|166929|sphingomyelin synthase 2##NM_152621|SGMS2|166929|sphingomyelin synthase 2##BC028705|SGMS2|166929|sphingomyelin synthase 2##AK314049|SGMS2|166929|sphingomyelin synthase 2##BC041369|SGMS2|166929|sphingomyelin synthase 2	0.020309	
chr16	53089067	53089199	reg1002515.p2	6.306	+	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	-252	+	AK299202 NM_001146188	-507420	-	NM_001080430	-508328	-	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	43966	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	75927	+	NM_001207030	315907	-	AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_001207030|LOC643802|643802|u3 small nucleolar ribonucleoprotein protein MPP10-like	0.0	
chr16	67450382	67450488	reg1022825.p2	6.306	+	TSC_hg19_v1_chr16_-_67450360 NM_013304 U90653 BC021908	-138	-	TSC_hg19_v1_chr16_-_67427402 AF132972 AF078846 BC000691 NM_015964 NM_016140	-23056	-	AK311487 NM_001161575 AK297329 AK309897 AK001866 AK292311 AY313780 AK301766	-69157	+	TSC_hg19_v1_chr16_+_67465023 U26726 BC036780 BC064536 NM_000196 U14631	14595	+	CU679153 DQ893270 DQ896601 X71490 TSC_hg19_v1_chr16_-_67515051 AK300570 AK313035 AK125522 BC008861 NM_004691	64609	-	NM_001138 U88063	67280	-	NM_013304|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U90653|ZDHHC1|29800|zinc finger, DHHC-type containing 1##BC021908|ZDHHC1|29800|zinc finger, DHHC-type containing 1##AF132972|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AF078846|TPPP3|51673|tubulin polymerization-promoting protein family member 3##BC000691|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_015964|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_016140|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AK311487|LRRC36|55282|leucine rich repeat containing 36##NM_001161575|LRRC36|55282|leucine rich repeat containing 36##AK297329|LRRC36|55282|leucine rich repeat containing 36##AK309897|LRRC36|55282|leucine rich repeat containing 36##AK001866|LRRC36|55282|leucine rich repeat containing 36##AK292311|LRRC36|55282|leucine rich repeat containing 36##AY313780|LRRC36|55282|leucine rich repeat containing 36##AK301766|LRRC36|55282|leucine rich repeat containing 36##U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##DQ893270|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##DQ896601|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##X71490|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK300570|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK313035|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK125522|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##BC008861|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_004691|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_001138|AGRP|181|agouti related protein homolog (mouse)##U88063|AGRP|181|agouti related protein homolog (mouse)	0.011817	
chr20	49120825	49120945	reg1017816.p1	6.306	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	-313255	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	-313504	+	NM_005194 TSC_hg19_v1_chr20_+_48807197	-313692	+	TSC_hg19_v1_chr20_+_49126895 AK290638 NM_002827	5991	+	TSC_hg19_v1_chr20_+_49126916 AK316563	6028	+	AK299830 TSC_hg19_v1_chr20_+_49126919	6034	+	EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK290638|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##NM_002827|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK316563|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1	0.568213	CTCF.p2:-4:0.568
chr10	34955357	34955494	reg1022499.p2	6.305	+	TSC_hg19_v1_chr10_-_33623996 BX648025	-1331427	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1331611	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	-1331972	-	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	148726	-	AK310225 AK300491 NM_001198778 NM_001198779	407787	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	423847	-	BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2	0.897987	CTCF.p2:-28:0.898
chr12	104806053	104806156	reg1028543.p1	6.305	+	TSC_hg19_v1_chr12_+_104697516 NM_001008394 AK098698 BC027612	-108576	+	AK128515 TSC_hg19_v1_chr12_+_104682642 AY344670 AY344671 AY344672 AY344680 AY344094 AY344096 AY344095 AY344678 AF077367 AY344679	-123492	+	D88687 TSC_hg19_v1_chr12_+_104681047 AK295067	-125018	+	TSC_hg19_v1_chr12_+_104850745 NM_001173982 NM_018413 AK313217	44590	+	AK290923 TSC_hg19_v1_chr12_+_104850752	44647	+	TSC_hg19_v1_chr12_+_104850778 BC013315	44667	+	NM_001008394|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK098698|EID3|493861|EP300 interacting inhibitor of differentiation 3##BC027612|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK128515|TXNRD1|7296|thioredoxin reductase 1##AY344670|TXNRD1|7296|thioredoxin reductase 1##AY344096|TXNRD1|7296|thioredoxin reductase 1##AY344095|TXNRD1|7296|thioredoxin reductase 1##AF077367|TXNRD1|7296|thioredoxin reductase 1##AY344679|TXNRD1|7296|thioredoxin reductase 1##D88687|TXNRD1|7296|thioredoxin reductase 1##AK295067|TXNRD1|7296|thioredoxin reductase 1##NM_001173982|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##NM_018413|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK313217|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK290923|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	0.0	
chr15	41222834	41222943	reg1020124.p1	6.305	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	-1190	+	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	-36188	+	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	-56441	-	NM_001142776 NM_024111 TSC_hg19_v1_chr15_+_41245671 BC019625 BC001683 BC001847 AY702027	22816	+	TSC_hg19_v1_chr15_-_41364176 AK057582	141316	-	BC144681 AB033085 NM_017553 BC146785 TSC_hg19_v1_chr15_-_41408344	185449	-	NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)##AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##NM_001142776|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##NM_024111|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC019625|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001683|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001847|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AY702027|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AK057582|INO80|54617|INO80 homolog (S. cerevisiae)##BC144681|INO80|54617|INO80 homolog (S. cerevisiae)##AB033085|INO80|54617|INO80 homolog (S. cerevisiae)##NM_017553|INO80|54617|INO80 homolog (S. cerevisiae)##BC146785|INO80|54617|INO80 homolog (S. cerevisiae)	0.676107	CTCF.p2:18:0.676
chr3	119529123	119529261	reg1025163.p1	6.305	+	AF084644 NM_022002 AB528010 HQ692837 HQ709177	-27612	+	BC017304 TSC_hg19_v1_chr3_+_119500947	-28247	+	AF061056 AK310789 AK223456 TSC_hg19_v1_chr3_+_119500896	-28310	+	AY123976 TSC_hg19_v1_chr3_-_119582426	53232	-	BC000251 AK290897 TSC_hg19_v1_chr3_-_119812684	283429	-	TSC_hg19_v1_chr3_-_119813270 BC012760 NM_001146156 NM_002093	283959	-	AF084644|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##NM_022002|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##HQ692837|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##HQ709177|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##BC017304|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AF061056|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AK310789|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AK223456|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AY123976|GSK3B|2932|glycogen synthase kinase 3 beta##BC000251|GSK3B|2932|glycogen synthase kinase 3 beta##AK290897|GSK3B|2932|glycogen synthase kinase 3 beta##BC012760|GSK3B|2932|glycogen synthase kinase 3 beta##NM_001146156|GSK3B|2932|glycogen synthase kinase 3 beta##NM_002093|GSK3B|2932|glycogen synthase kinase 3 beta	0.315156	CTCF.p2:9:0.315
chr5	64267500	64267615	reg1024301.p1	6.305	+	BX647971 TSC_hg19_v1_chr5_+_64064766 NM_005869 AK225161 AK225105 AK308223 AK312954 AY358569 AF039692 BC012117	-202773	+	TSC_hg19_v1_chr5_-_64064491 AK094073 AX748442 NM_173829	-203053	-	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	-203111	-	AY692424 NM_197941 AY692422	510167	-	TSC_hg19_v1_chr5_-_64858996 AF315941 BC005400 BC008504 NM_022145	591407	-	TSC_hg19_v1_chr5_+_64859122 AK025679 AK093675 AK300022 AK298175 AK301654 NM_015342 BC015385 AB384434 CU677289 GQ129262 GQ129263 D38552	591561	+	BX647971|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##NM_005869|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225161|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225105|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK308223|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK312954|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AY358569|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AF039692|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##BC012117|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK094073|SREK1IP1|285672|SREK1-interacting protein 1##NM_173829|SREK1IP1|285672|SREK1-interacting protein 1##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1##AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AF315941|CENPK|64105|centromere protein K##BC005400|CENPK|64105|centromere protein K##BC008504|CENPK|64105|centromere protein K##NM_022145|CENPK|64105|centromere protein K##AK025679|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK300022|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK298175|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK301654|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##NM_015342|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##BC015385|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129262|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129263|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##D38552|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1	0.498361	CTCF.p2:-10:0.498
chr8	78310617	78310764	reg1025290.p1	6.305	+	NM_001172086 NM_001172087	-397411	-	BC000661 BC093043 TSC_hg19_v1_chr8_-_77912318 BC005375 M85038 AK312997 M86852 NM_000318 NM_001079867	-398281	-	AK131399 TSC_hg19_v1_chr8_+_77765961	-544801	+	NM_006823 NM_181839 S76965	1117645	+	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	1267630	+	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	1406958	-	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2##NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2##BC000661|PEX2|5828|peroxisomal biogenesis factor 2##BC093043|PEX2|5828|peroxisomal biogenesis factor 2##BC005375|PEX2|5828|peroxisomal biogenesis factor 2##M85038|PEX2|5828|peroxisomal biogenesis factor 2##AK312997|PEX2|5828|peroxisomal biogenesis factor 2##M86852|PEX2|5828|peroxisomal biogenesis factor 2##NM_000318|PEX2|5828|peroxisomal biogenesis factor 2##NM_001079867|PEX2|5828|peroxisomal biogenesis factor 2##AK131399|ZFHX4|79776|zinc finger homeobox 4##NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7	0.846884	CTCF.p2:10:0.847
chr14	52510535	52510638	reg1022643.p1	6.304	+	TSC_hg19_v1_chr14_+_52456323 EU446806 AB463506 AY817175	-54247	+	AF087877 AF100755 AF151857 DQ525179 NM_016039 TSC_hg19_v1_chr14_+_52456231 AK312004 BC001722	-54332	+	TSC_hg19_v1_chr14_+_52327416 BC020774	-183150	+	AJ223500 D86425 AB385187 CU690132 TSC_hg19_v1_chr14_-_52535721	25136	-	TSC_hg19_v1_chr14_-_52535737 AK300462	25164	-	BC035608 TSC_hg19_v1_chr14_-_52535777 AK291652	25188	-	EU446806|C14orf166|51637|chromosome 14 open reading frame 166##AY817175|C14orf166|51637|chromosome 14 open reading frame 166##AF087877|C14orf166|51637|chromosome 14 open reading frame 166##AF100755|C14orf166|51637|chromosome 14 open reading frame 166##AF151857|C14orf166|51637|chromosome 14 open reading frame 166##DQ525179|C14orf166|51637|chromosome 14 open reading frame 166##NM_016039|C14orf166|51637|chromosome 14 open reading frame 166##AK312004|C14orf166|51637|chromosome 14 open reading frame 166##BC001722|C14orf166|51637|chromosome 14 open reading frame 166##BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AJ223500|NID2|22795|nidogen 2 (osteonidogen)##D86425|NID2|22795|nidogen 2 (osteonidogen)##AK300462|NID2|22795|nidogen 2 (osteonidogen)##BC035608|NID2|22795|nidogen 2 (osteonidogen)##AK291652|NID2|22795|nidogen 2 (osteonidogen)	0.113254	
chr19	5968094	5968181	reg1022602.p1	6.304	+	AK226026 NM_004058 NM_080590 BC080599 BC019065 BC101513 BC104766 X97966 BC011961	-53796	+	TSC_hg19_v1_chr19_+_5904884 NM_001017921 AK124162 BC110802	-63268	+	TSC_hg19_v1_chr19_-_5903991 NM_001193375 NM_175614	-64130	-	CU678680 DQ234346 AK308205 TSC_hg19_v1_chr19_-_5978122 BC004349 AL050149 AK222813 AK301942 Y08698 AK222990	9975	-	AK025300 AK299260 AK314343 TSC_hg19_v1_chr19_-_5978152	10014	-	AK299856 TSC_hg19_v1_chr19_-_5978306 NM_003624 NM_007320 NM_007322	10147	-	AK226026|CAPS|828|calcyphosine##NM_004058|CAPS|828|calcyphosine##NM_080590|CAPS|828|calcyphosine##BC080599|CAPS|828|calcyphosine##BC019065|CAPS|828|calcyphosine##BC101513|CAPS|828|calcyphosine##BC104766|CAPS|828|calcyphosine##X97966|CAPS|828|calcyphosine##BC011961|CAPS|828|calcyphosine##NM_001017921|VMAC|400673|vimentin-type intermediate filament associated coiled-coil protein##AK124162|VMAC|400673|vimentin-type intermediate filament associated coiled-coil protein##BC110802|VMAC|400673|vimentin-type intermediate filament associated coiled-coil protein##NM_001193375|NDUFA11|126328|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa##NM_175614|NDUFA11|126328|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa##DQ234346|RANBP3|8498|RAN binding protein 3##AK308205|RANBP3|8498|RAN binding protein 3##BC004349|RANBP3|8498|RAN binding protein 3##AL050149|RANBP3|8498|RAN binding protein 3##AK222813|RANBP3|8498|RAN binding protein 3##AK301942|RANBP3|8498|RAN binding protein 3##Y08698|RANBP3|8498|RAN binding protein 3##AK222990|RANBP3|8498|RAN binding protein 3##AK025300|RANBP3|8498|RAN binding protein 3##AK299260|RANBP3|8498|RAN binding protein 3##AK314343|RANBP3|8498|RAN binding protein 3##AK299856|RANBP3|8498|RAN binding protein 3##NM_003624|RANBP3|8498|RAN binding protein 3##NM_007320|RANBP3|8498|RAN binding protein 3##NM_007322|RANBP3|8498|RAN binding protein 3	0.620584	CTCF.p2:-21:0.621
chr2	165594251	165594390	reg1020473.p1	6.304	+	TSC_hg19_v1_chr2_-_165551183 AK001813 AK002057	-43057	-	L76687 NM_004490	-115962	-	TSC_hg19_v1_chr2_-_165477987 AK307744 AK313153	-116327	-	TSC_hg19_v1_chr2_-_165697908 AB023194	103566	-	BC071588 NM_014900 TSC_hg19_v1_chr2_-_165697936	103617	-	TSC_hg19_v1_chr2_-_165698334 AK002054	104007	-	AK001813|COBLL1|22837|COBL-like 1##AK002057|COBLL1|22837|COBL-like 1##L76687|GRB14|2888|growth factor receptor-bound protein 14##NM_004490|GRB14|2888|growth factor receptor-bound protein 14##AK307744|GRB14|2888|growth factor receptor-bound protein 14##AK313153|GRB14|2888|growth factor receptor-bound protein 14##AB023194|COBLL1|22837|COBL-like 1##BC071588|COBLL1|22837|COBL-like 1##NM_014900|COBLL1|22837|COBL-like 1##AK002054|COBLL1|22837|COBL-like 1	0.878526	CTCF.p2:-19:0.879
chr4	26180953	26181083	reg1020999.p2	6.304	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-265154	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-316464	-	NM_001177999 AK314514	-522928	+	L07875 BC020780 NM_005349 NM_203283	140301	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	141291	+	TSC_hg19_v1_chr4_+_26322635 AK302230	141618	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.0	
chr10	126377563	126377731	reg1022917.p2	6.303	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-227226	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-239070	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-270129	-	D50930 TSC_hg19_v1_chr10_-_126432660	54997	-	TSC_hg19_v1_chr10_-_126432823 BC031654	55169	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	55264	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.0	
chr1	95507264	95507374	reg1021338.p1	6.303	+	TSC_hg19_v1_chr1_-_95392690 S80562 BC025372 AK312370 AK298145 NM_001839	-114679	-	CR541848 CU692978 DQ893013 DQ896258 TSC_hg19_v1_chr1_-_95392498	-114846	-	TSC_hg19_v1_chr1_+_95286194 AK300193	-221120	+	TSC_hg19_v1_chr1_-_95538474 BC011706 AK289395 NM_144988	31167	-	BC108263 NM_001199679	50753	+	TSC_hg19_v1_chr1_+_95582939 NM_152487 AK056404 BC137457 BC137458 BC139737	75641	+	S80562|CNN3|1266|calponin 3, acidic##BC025372|CNN3|1266|calponin 3, acidic##AK312370|CNN3|1266|calponin 3, acidic##AK298145|CNN3|1266|calponin 3, acidic##NM_001839|CNN3|1266|calponin 3, acidic##CR541848|CNN3|1266|calponin 3, acidic##DQ893013|CNN3|1266|calponin 3, acidic##DQ896258|CNN3|1266|calponin 3, acidic##AK300193|SLC44A3|126969|solute carrier family 44, member 3##BC011706|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##AK289395|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##NM_144988|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##BC108263|TMEM56|148534|transmembrane protein 56##NM_001199679|TMEM56|148534|transmembrane protein 56##NM_152487|TMEM56|148534|transmembrane protein 56##AK056404|TMEM56|148534|transmembrane protein 56##BC137457|TMEM56|148534|transmembrane protein 56##BC137458|TMEM56|148534|transmembrane protein 56##BC139737|TMEM56|148534|transmembrane protein 56	0.039665	
chr2	170734053	170734142	reg1022548.p1	6.303	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-50139	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-52712	-	TSC_hg19_v1_chr2_+_170662051 M20328 M35261	-71953	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	300588	+	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	837761	+	TSC_hg19_v1_chr2_+_171571942 AB464708	837880	+	NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##M20328|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##M35261|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor	0.422347	CTCF.p2:21:0.422
chr3	29322306	29322436	reg1022225.p1	6.303	+	NM_001040432	-890385	+	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	-931810	-	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	-931989	-	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	593	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	1325651	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	1326032	+	NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2##NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	0.928286	CTCF.p2:11:0.928
chr7	117836046	117836209	reg1024409.p2	6.303	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-11956	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-322584	-	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	-322646	-	NM_019644 AK302407	28607	+	AK307139 AB028967 NM_012281	2077577	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	2661893	-	NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2##NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12	0.994935	CTCF.p2:-6:0.995
chr1	152371679	152371778	reg1021257.p1	6.302	+	AY827490 NM_001014342	-39247	-	L01090 NM_002016	-74050	-	AB180729 NM_001009931 AY396741	-175059	-	AF077831 AK291301 AK298640 AK316568 BC030807 NM_016190	15010	-	NM_178438	111591	+	AJ243662 NM_019060	115249	+	AY827490|FLG2|388698|filaggrin family member 2##NM_001014342|FLG2|388698|filaggrin family member 2##L01090|FLG|2312|filaggrin##NM_002016|FLG|2312|filaggrin##AB180729|HRNR|388697|hornerin##NM_001009931|HRNR|388697|hornerin##AY396741|HRNR|388697|hornerin##AF077831|CRNN|49860|cornulin##AK291301|CRNN|49860|cornulin##AK298640|CRNN|49860|cornulin##AK316568|CRNN|49860|cornulin##BC030807|CRNN|49860|cornulin##NM_016190|CRNN|49860|cornulin##NM_178438|LCE5A|254910|late cornified envelope 5A##AJ243662|CRCT1|54544|cysteine-rich C-terminal 1##NM_019060|CRCT1|54544|cysteine-rich C-terminal 1	0.962415	CTCF.p2:2:0.962
chr11	62676724	62676832	reg1022433.p1	6.302	+	TSC_hg19_v1_chr11_+_62649170 AK308797 AK311592 AF055031	-27586	+	TSC_hg19_v1_chr11_+_62648367 NM_001013251 AK304685 AK090758 AX746603 J03569 AK304497 AB018010 J02939 AK225304 J02769 EU832612 EU832683	-28271	+	TSC_hg19_v1_chr11_+_62623580 NM_001012662 NM_001012664 NM_002394 BC001061 AK025584 BC003000	-53228	+	BC007740 AK312374 TSC_hg19_v1_chr11_-_62688827	12005	-	BC022984 NM_000738 AJ006520 TSC_hg19_v1_chr11_-_62689135	12295	-	AK298374 AF057039 AF104038 AF124373 AB009698 AB009697 AK091879 BC033682 AK055764 NM_004790 NM_153276 NM_153277 NM_153278	75654	-	AK308797|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK311592|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AF055031|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_001013251|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK304685|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK090758|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##J03569|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK304497|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AB018010|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##J02939|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK225304|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##J02769|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##EU832612|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##EU832683|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_001012662|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_001012664|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##NM_002394|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC001061|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK025584|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC003000|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##BC007740|CHRM1|1128|cholinergic receptor, muscarinic 1##AK312374|CHRM1|1128|cholinergic receptor, muscarinic 1##BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1##NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1##AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1##AK298374|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF057039|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF104038|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF124373|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009698|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009697|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK091879|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##BC033682|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK055764|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_004790|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153276|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153277|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153278|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6	0.952509	CTCF.p2:6:0.953
chr18	42855612	42855750	reg1022795.p2	6.302	+	NM_001242692 AK292422	-62729	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-594813	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-595567	+	AF349446 NM_007163	339084	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	448423	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	448476	+	NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.994017	CTCF.p2:-3:0.994
chr3	125965067	125965156	reg1021510.p1	6.302	+	AF052732 BC027241 AK222535 AK222694 TSC_hg19_v1_chr3_-_125899430 AK294392 AK294530 AB209299 NM_012190	-65668	-	TSC_hg19_v1_chr3_-_125899364 AK307699 AK308112	-65739	-	NM_001164475 AK298070	-144717	-	TSC_hg19_v1_chr3_-_126076252 NM_014079 BC036733	111104	-	AK097402 NM_182628 TSC_hg19_v1_chr3_+_126113866	148712	+	TSC_hg19_v1_chr3_-_126194735 AY936556	229614	-	AF052732|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##BC027241|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222535|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222694|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294392|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294530|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AB209299|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##NM_012190|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK307699|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK308112|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##NM_001164475|SLC41A3|54946|solute carrier family 41, member 3##AK298070|SLC41A3|54946|solute carrier family 41, member 3##NM_014079|KLF15|28999|Kruppel-like factor 15##BC036733|KLF15|28999|Kruppel-like factor 15##AK097402|CCDC37|348807|coiled-coil domain containing 37##NM_182628|CCDC37|348807|coiled-coil domain containing 37##AY936556|ZXDC|79364|ZXD family zinc finger C	0.800036	CTCF.p2:8:0.800
chr5	92174132	92174231	reg1021926.p1	6.302	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-1495049	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-1498019	+	AK091866 TSC_hg19_v1_chr5_-_90610220	-1563936	-	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	742782	-	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	744802	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	746487	+	BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	0.281061	CTCF.p2:-19:0.281
chr6	134242533	134242631	reg1020971.p1	6.302	+	TSC_hg19_v1_chr6_+_134210277 AF035718 AF047419 BC025697	-32312	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	-32328	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	-680050	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	30782	+	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	31763	+	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	131121	-	AF035718|TCF21|6943|transcription factor 21##AF047419|TCF21|6943|transcription factor 21##BC025697|TCF21|6943|transcription factor 21##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21##BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1##NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12	0.981953	CTCF.p2:-5:0.982
chr8	48079111	48079218	reg1021585.p2	6.302	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	-4931559	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-5083517	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-5083531	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	94331	+	TSC_hg19_v1_chr8_+_48173521 AK303579	94355	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	94368	+	AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146	0.150782	
chr14	91830487	91830668	reg1017702.p1	6.301	+	BC098567 NM_003485	-110383	-	BC128536 NM_001177676	-119726	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-249550	+	TSC_hg19_v1_chr14_-_91884159 AF070587	53571	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	53598	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	145923	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.0	
chr4	5462015	5462124	reg1021854.p1	6.301	+	TSC_hg19_v1_chr4_+_5053464 AJ250839 NM_018401 BC038238 AB528925 DQ890554 DQ893714	-408542	+	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	-408789	+	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	-440923	-	D82070 NM_005750 BC117444 BC117446 HQ258562	64900	+	AY185210 NM_147127 TSC_hg19_v1_chr4_-_5710299	248231	-	AY152402 AY152403 NM_001166136	249205	-	AJ250839|STK32B|55351|serine/threonine kinase 32B##NM_018401|STK32B|55351|serine/threonine kinase 32B##BC038238|STK32B|55351|serine/threonine kinase 32B##DQ890554|STK32B|55351|serine/threonine kinase 32B##DQ893714|STK32B|55351|serine/threonine kinase 32B##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##D82070|C4orf6|10141|chromosome 4 open reading frame 6##NM_005750|C4orf6|10141|chromosome 4 open reading frame 6##BC117444|C4orf6|10141|chromosome 4 open reading frame 6##BC117446|C4orf6|10141|chromosome 4 open reading frame 6##HQ258562|C4orf6|10141|chromosome 4 open reading frame 6##AY185210|EVC2|132884|Ellis van Creveld syndrome 2##NM_147127|EVC2|132884|Ellis van Creveld syndrome 2##AY152402|EVC2|132884|Ellis van Creveld syndrome 2##AY152403|EVC2|132884|Ellis van Creveld syndrome 2##NM_001166136|EVC2|132884|Ellis van Creveld syndrome 2	0.974722	CTCF.p2:-19:0.975
chr7	26101194	26101339	reg1000345.p1	6.301	+	AB040290 AF330057 AF440392 NM_022150	-833186	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-881395	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-936326	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	90667	+	TSC_hg19_v1_chr7_-_26232151 BX538099	130885	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	139075	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.0	
chr7	37666025	37666125	reg1016056.p1	6.301	+	NM_001206480	-177181	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	-177520	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	-177607	-	BC043356 TSC_hg19_v1_chr7_+_37723380	57307	+	AB529245 AY288420 BC120951 BC120952 NM_181791	113920	+	BC036816 NM_016616	222123	+	NM_001206480|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##AY288420|GPR141|353345|G protein-coupled receptor 141##BC120951|GPR141|353345|G protein-coupled receptor 141##BC120952|GPR141|353345|G protein-coupled receptor 141##NM_181791|GPR141|353345|G protein-coupled receptor 141##BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)	0.082223	
chr7	69626723	69626856	reg1022554.p1	6.301	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-562201	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-562460	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-562953	+	TSC_hg19_v1_chr7_+_70231164 AK296981	604416	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	970999	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2174989	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.323975	CTCF.p2:15:0.324
chrX	134133633	134133749	reg1020176.p2	6.301	+	BC008642 NM_001163438	-8724	+	AK316570 AF086333 TSC_hg19_v1_chrX_-_134049288 AK307196 BC005700 AK299074 AL137163 NM_019556	-84419	-	NM_001170782 NM_001170784 BC016784 NM_001170779 NM_001170781 NM_001170783 NM_138819 BC017868 AK090611 AK295485 AK310079 BC063491 BC065225	-192440	+	HQ258053 TSC_hg19_v1_chrX_-_134156520 BC063496 BC073159 BC113720 BC117393 BC086860 NM_001078173	22852	-	TSC_hg19_v1_chrX_+_134166384 NM_001078171 Y13374 AF038168 AF052096 BC106076 BC002385 BC002410	32669	+	BC008096 TSC_hg19_v1_chrX_-_134186208 BC071991 AL117556 BC000393 BC019300 NM_001078172 NM_001134321	52438	-	BC008642|CXorf69|644538|chromosome X open reading frame 69##NM_001163438|CXorf69|644538|chromosome X open reading frame 69##AK316570|MOSPD1|56180|motile sperm domain containing 1##AF086333|MOSPD1|56180|motile sperm domain containing 1##AK307196|MOSPD1|56180|motile sperm domain containing 1##BC005700|MOSPD1|56180|motile sperm domain containing 1##AK299074|MOSPD1|56180|motile sperm domain containing 1##AL137163|MOSPD1|56180|motile sperm domain containing 1##NM_019556|MOSPD1|56180|motile sperm domain containing 1##NM_001170782|FAM122C|159091|family with sequence similarity 122C##NM_001170784|FAM122C|159091|family with sequence similarity 122C##BC016784|FAM122C|159091|family with sequence similarity 122C##NM_001170779|FAM122C|159091|family with sequence similarity 122C##NM_001170781|FAM122C|159091|family with sequence similarity 122C##NM_001170783|FAM122C|159091|family with sequence similarity 122C##NM_138819|FAM122C|159091|family with sequence similarity 122C##BC017868|FAM122C|159091|family with sequence similarity 122C##AK090611|FAM122C|159091|family with sequence similarity 122C##AK295485|FAM122C|159091|family with sequence similarity 122C##AK310079|FAM122C|159091|family with sequence similarity 122C##BC063491|FAM122C|159091|family with sequence similarity 122C##BC065225|FAM122C|159091|family with sequence similarity 122C##HQ258053|FAM127C|441518|family with sequence similarity 127, member C##BC063496|FAM127C|441518|family with sequence similarity 127, member C##BC073159|FAM127C|441518|family with sequence similarity 127, member C##BC113720|FAM127C|441518|family with sequence similarity 127, member C##BC117393|FAM127C|441518|family with sequence similarity 127, member C##BC086860|FAM127C|441518|family with sequence similarity 127, member C##NM_001078173|FAM127C|441518|family with sequence similarity 127, member C##NM_001078171|FAM127A|8933|family with sequence similarity 127, member A##Y13374|FAM127A|8933|family with sequence similarity 127, member A##AF038168|FAM127A|8933|family with sequence similarity 127, member A##AF052096|FAM127A|8933|family with sequence similarity 127, member A##BC106076|FAM127A|8933|family with sequence similarity 127, member A##BC002385|FAM127A|8933|family with sequence similarity 127, member A##BC002410|FAM127A|8933|family with sequence similarity 127, member A##BC008096|FAM127B|26071|family with sequence similarity 127, member B##BC071991|FAM127B|26071|family with sequence similarity 127, member B##AL117556|FAM127B|26071|family with sequence similarity 127, member B##BC000393|FAM127B|26071|family with sequence similarity 127, member B##BC019300|FAM127B|26071|family with sequence similarity 127, member B##NM_001078172|FAM127B|26071|family with sequence similarity 127, member B##NM_001134321|FAM127B|26071|family with sequence similarity 127, member B	0.936317	CTCF.p2:5:0.936
chr10	67118461	67118588	reg1023844.p1	6.300	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-1837283	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-1837362	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-1837409	+	NM_178011 BX640611 AY358315 BC111492	1567291	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	2306872	-	AF091606 AK313882 NM_013266	2337413	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.02606	
chr7	28663610	28663749	reg1023260.p2	6.300	+	AK292916 TSC_hg19_v1_chr7_+_28530784	-132914	+	L05911 NM_004904	-188446	+	L05515 NM_182898	-211536	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	62004	+	CU690330 TSC_hg19_v1_chr7_-_28997732	334018	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	334250	-	AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##L05515|CREB5|9586|cAMP responsive element binding protein 5##NM_182898|CREB5|9586|cAMP responsive element binding protein 5##L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats	0.979327	CTCF.p2:7:0.979
chr4	58030278	58030409	reg1021348.p2	6.299	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-53775	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-53811	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-53944	-	TSC_hg19_v1_chr4_+_62066948 AK309793	4036632	+	NM_015236	4332495	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	7244753	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.997086	CTCF.p2:9:0.997
chr6	90085324	90085453	reg1025696.p1	6.299	+	TSC_hg19_v1_chr6_-_90062622 NM_016021	-22601	-	TSC_hg19_v1_chr6_-_90062559 AK290574 BC013973	-22873	-	TSC_hg19_v1_chr6_-_90062439 AK223464 AK300629	-22948	-	BC003088 AF272036 AL137502 TSC_hg19_v1_chr6_-_90121800	36352	-	TSC_hg19_v1_chr6_-_90121945 AK289799	36540	-	TSC_hg19_v1_chr6_-_90121986 NM_021244	36736	-	NM_016021|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AK290574|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##BC013973|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AK223464|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AK300629|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##BC003088|RRAGD|58528|Ras-related GTP binding D##AF272036|RRAGD|58528|Ras-related GTP binding D##AL137502|RRAGD|58528|Ras-related GTP binding D##AK289799|RRAGD|58528|Ras-related GTP binding D##NM_021244|RRAGD|58528|Ras-related GTP binding D	0.833518	CTCF.p2:12:0.834
chr10	130010303	130010418	reg1021299.p2	6.298	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-85832	-	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	-164506	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-304905	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	1255111	+	TSC_hg19_v1_chr10_+_131265507 BC000824	1255154	+	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	1751693	-	NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3	0.984689	CTCF.p2:-9:0.966
chr1	25286816	25286964	reg1024629.p1	6.298	+	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-30104	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-30151	-	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	-30465	-	BC013362 AK310945 NM_001031680 AF022726	4652	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	272097	-	BC065040 TSC_hg19_v1_chr1_-_25573922	287033	-	AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63	0.554021	CTCF.p2:-7:0.554
chr21	27268197	27268301	reg1023782.p1	6.298	+	S41242 S41243 TSC_hg19_v1_chr21_-_27253245	-15026	-	TSC_hg19_v1_chr21_-_27107965 NM_001003696 NM_001003697 NM_001003701 NM_001003703 NM_001685 BC001178	-160278	-	U13044 TSC_hg19_v1_chr21_+_27107734	-160483	+	TSC_hg19_v1_chr21_-_27372469 X06981 X06982	104230	-	TSC_hg19_v1_chr21_-_27423435 BC018937	155194	-	AK295621 NM_001136016 AK311717	244473	-	S41243|APP|351|amyloid beta (A4) precursor protein##NM_001003696|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001003697|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001003701|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001003703|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_001685|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##BC001178|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##U13044|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa##X06981|APP|351|amyloid beta (A4) precursor protein##X06982|APP|351|amyloid beta (A4) precursor protein##AK295621|APP|351|amyloid beta (A4) precursor protein##NM_001136016|APP|351|amyloid beta (A4) precursor protein##AK311717|APP|351|amyloid beta (A4) precursor protein	0.94016	CTCF.p2:-5:0.940
chr3	119917306	119917409	reg1022233.p1	6.298	+	TSC_hg19_v1_chr3_+_119813618 BC035247	-103687	+	TSC_hg19_v1_chr3_-_119813270 BC012760 NM_001146156 NM_002093	-104206	-	BC000251 AK290897 TSC_hg19_v1_chr3_-_119812684	-104736	-	NM_001168271 NM_153002	45784	-	TSC_hg19_v1_chr3_-_120068162 AB528173 AM393236 BC013757 NM_001099678	150784	-	TSC_hg19_v1_chr3_-_120169846 AB527652 D89937 BC000055 U06863 AK300356 AK289388 AK291138 AK311050 AK300436 BX647421 AK312261 NM_007085	252480	-	BC012760|GSK3B|2932|glycogen synthase kinase 3 beta##NM_001146156|GSK3B|2932|glycogen synthase kinase 3 beta##NM_002093|GSK3B|2932|glycogen synthase kinase 3 beta##BC000251|GSK3B|2932|glycogen synthase kinase 3 beta##AK290897|GSK3B|2932|glycogen synthase kinase 3 beta##NM_001168271|GPR156|165829|G protein-coupled receptor 156##NM_153002|GPR156|165829|G protein-coupled receptor 156##AM393236|LRRC58|116064|leucine rich repeat containing 58##BC013757|LRRC58|116064|leucine rich repeat containing 58##NM_001099678|LRRC58|116064|leucine rich repeat containing 58##BC000055|FSTL1|11167|follistatin-like 1##U06863|FSTL1|11167|follistatin-like 1##AK300356|FSTL1|11167|follistatin-like 1##AK289388|FSTL1|11167|follistatin-like 1##AK291138|FSTL1|11167|follistatin-like 1##AK311050|FSTL1|11167|follistatin-like 1##AK300436|FSTL1|11167|follistatin-like 1##BX647421|FSTL1|11167|follistatin-like 1##AK312261|FSTL1|11167|follistatin-like 1##NM_007085|FSTL1|11167|follistatin-like 1	0.199226	
chr3	171421950	171422070	reg1025068.p1	6.298	+	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-243939	-	NM_000340	-677243	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-677477	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	106245	-	NM_001164436 AK026825	139138	+	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	335405	+	AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B	0.997071	CTCF.p2:-5:0.997
chr5	140420896	140421022	reg1023406.p1	6.298	+	BC104776 BC105111 AF152304 AF152474 NM_031883	-74639	+	TSC_hg19_v1_chr5_+_140346116 BC063288	-74865	+	NM_018899 AK123867	-75177	+	BC112096 BC112098 NM_013340 AF152488	10048	+	TSC_hg19_v1_chr5_+_140474206 AK027526 BC098575 NM_018936 BC011717 BC023636 AK314642 BC098138 BC098347 BC103505 AF152495 AF217756 AB209745	53347	+	AK313451 TSC_hg19_v1_chr5_+_140480056 BC104817 AF152496 AF217755 NM_018937	59185	+	BC104776|PCDHAC2|56134|protocadherin alpha subfamily C, 2##BC105111|PCDHAC2|56134|protocadherin alpha subfamily C, 2##AF152304|PCDHAC2|56134|protocadherin alpha subfamily C, 2##AF152474|PCDHAC2|56134|protocadherin alpha subfamily C, 2##NM_031883|PCDHAC2|56134|protocadherin alpha subfamily C, 2##BC063288|PCDHAC2|56134|protocadherin alpha subfamily C, 2##NM_018899|PCDHAC2|56134|protocadherin alpha subfamily C, 2##AK123867|PCDHAC2|56134|protocadherin alpha subfamily C, 2##BC112096|PCDHB1|29930|protocadherin beta 1##BC112098|PCDHB1|29930|protocadherin beta 1##NM_013340|PCDHB1|29930|protocadherin beta 1##AF152488|PCDHB1|29930|protocadherin beta 1##AK027526|PCDHB2|56133|protocadherin beta 2##BC098575|PCDHB2|56133|protocadherin beta 2##NM_018936|PCDHB2|56133|protocadherin beta 2##AK314642|PCDHB2|56133|protocadherin beta 2##BC098347|PCDHB2|56133|protocadherin beta 2##AF152495|PCDHB2|56133|protocadherin beta 2##AF217756|PCDHB2|56133|protocadherin beta 2##AB209745|PCDHB2|56133|protocadherin beta 2##AK313451|PCDHB3|56132|protocadherin beta 3##BC104817|PCDHB3|56132|protocadherin beta 3##AF152496|PCDHB3|56132|protocadherin beta 3##AF217755|PCDHB3|56132|protocadherin beta 3##NM_018937|PCDHB3|56132|protocadherin beta 3	0.986782	CTCF.p2:4:0.968
chr5	26483028	26483145	reg1021620.p1	6.298	+	NM_006727	-1838002	-	DQ388610 NM_020227 AK301776	-2975343	+	L33477 NM_004061	-3629356	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	555585	-	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	989317	+	NM_004932 TSC_hg19_v1_chr5_+_31193792 AK291290	4710710	+	NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401##NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)	0.15121	
chr11	1567964	1568091	reg1023066.p1	6.297	+	AB066564 NM_001172223 AK296658	-60135	-	TSC_hg19_v1_chr11_+_1463679 AK074411 AK297306	-104311	+	TSC_hg19_v1_chr11_+_1411225 AY166857 NM_003957 AF533876 AF533877 AF533878 AF533879 AF533880	-156832	+	NM_004420 U27193 TSC_hg19_v1_chr11_-_1593332	25214	-	AB528866 AB126070 NM_001005922	38469	-	AB528163 BC132882 BC132908 AJ628245 NM_001004325 AB126071	51479	-	AB066564|MOB2|81532|MOB kinase activator 2##NM_001172223|MOB2|81532|MOB kinase activator 2##AK296658|MOB2|81532|MOB kinase activator 2##AK074411|BRSK2|9024|BR serine/threonine kinase 2##AK297306|BRSK2|9024|BR serine/threonine kinase 2##AY166857|BRSK2|9024|BR serine/threonine kinase 2##NM_003957|BRSK2|9024|BR serine/threonine kinase 2##AF533876|BRSK2|9024|BR serine/threonine kinase 2##AF533877|BRSK2|9024|BR serine/threonine kinase 2##AF533878|BRSK2|9024|BR serine/threonine kinase 2##AF533879|BRSK2|9024|BR serine/threonine kinase 2##AF533880|BRSK2|9024|BR serine/threonine kinase 2##NM_004420|DUSP8|1850|dual specificity phosphatase 8##U27193|DUSP8|1850|dual specificity phosphatase 8##AB126070|KRTAP5-1|387264|keratin associated protein 5-1##NM_001005922|KRTAP5-1|387264|keratin associated protein 5-1##BC132882|KRTAP5-2|440021|keratin associated protein 5-2##BC132908|KRTAP5-2|440021|keratin associated protein 5-2##AJ628245|KRTAP5-2|440021|keratin associated protein 5-2##NM_001004325|KRTAP5-2|440021|keratin associated protein 5-2##AB126071|KRTAP5-2|440021|keratin associated protein 5-2	0.939878	CTCF.p2:-16:0.940
chr13	80936174	80936312	reg1023365.p1	6.297	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-21179	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-23201	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-880688	+	TSC_hg19_v1_chr13_-_84456424 BC051738	3520182	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	3520257	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	5437196	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.2717	CTCF.p2:25:0.272
chr3	138198320	138198440	reg1020984.p1	6.297	+	TSC_hg19_v1_chr3_+_138153427 BC037292 AK125080 AK289530	-44941	+	NM_031913 TSC_hg19_v1_chr3_+_138153418	-44964	+	NM_001252090	-130411	+	TSC_hg19_v1_chr3_-_138313097 AF202146 AF289495 AK225440 AK299003 AK295866 AK294587 AK301913 BC030598 NM_024491 AK314314	114730	-	AK125477 TSC_hg19_v1_chr3_+_138327450	129068	+	NM_001033030 NM_001033031 NM_001033032 TSC_hg19_v1_chr3_+_138327638 BC012478	129236	+	BC037292|ESYT3|83850|extended synaptotagmin-like protein 3##AK125080|ESYT3|83850|extended synaptotagmin-like protein 3##AK289530|ESYT3|83850|extended synaptotagmin-like protein 3##NM_031913|ESYT3|83850|extended synaptotagmin-like protein 3##NM_001252090|MRAS|22808|muscle RAS oncogene homolog##AF202146|CEP70|80321|centrosomal protein 70kDa##AF289495|CEP70|80321|centrosomal protein 70kDa##AK225440|CEP70|80321|centrosomal protein 70kDa##AK299003|CEP70|80321|centrosomal protein 70kDa##AK295866|CEP70|80321|centrosomal protein 70kDa##AK294587|CEP70|80321|centrosomal protein 70kDa##AK301913|CEP70|80321|centrosomal protein 70kDa##BC030598|CEP70|80321|centrosomal protein 70kDa##NM_024491|CEP70|80321|centrosomal protein 70kDa##AK314314|CEP70|80321|centrosomal protein 70kDa##AK125477|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033030|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033031|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033032|FAIM|55179|Fas apoptotic inhibitory molecule##BC012478|FAIM|55179|Fas apoptotic inhibitory molecule	0.901583	CTCF.p2:-5:0.902
chr4	38762572	38762752	reg1022624.p1	6.297	+	AF289565 TSC_hg19_v1_chr4_-_38666549	-96173	-	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	-96836	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-783645	+	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	21937	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	43757	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	95766	-	AF289565|FLJ13197|79667|uncharacterized FLJ13197##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6	0.0	
chr1	160028034	160028117	reg1027597.p1	6.296	+	AB028127 TSC_hg19_v1_chr1_-_160001781 BC019865 AK074655 BC011395 NM_145167	-26321	-	CU676470 TSC_hg19_v1_chr1_-_160001654 BC001803	-26479	-	BC074754 BC070213 AY358801 AF275725 AY034613 NM_001146172 NM_001146173 NM_033438	-104073	-	BC131627 BC034036 AK312383 TSC_hg19_v1_chr1_-_160040009 U52155 NM_002241	11923	-	TSC_hg19_v1_chr1_+_160051343 NM_004983 U52152 BC117516 BC117517 BC117518 BC117519	23287	+	AB590475 TSC_hg19_v1_chr1_-_160068277 AY157579 AF311906 AY044845	40222	-	AB028127|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC019865|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AK074655|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC011395|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##NM_145167|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC001803|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC074754|SLAMF9|89886|SLAM family member 9##BC070213|SLAMF9|89886|SLAM family member 9##AY358801|SLAMF9|89886|SLAM family member 9##AF275725|SLAMF9|89886|SLAM family member 9##AY034613|SLAMF9|89886|SLAM family member 9##NM_001146172|SLAMF9|89886|SLAM family member 9##NM_001146173|SLAMF9|89886|SLAM family member 9##NM_033438|SLAMF9|89886|SLAM family member 9##BC131627|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##BC034036|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##AK312383|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##U52155|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##NM_002241|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##NM_004983|KCNJ9|3765|potassium inwardly-rectifying channel, subfamily J, member 9##U52152|KCNJ9|3765|potassium inwardly-rectifying channel, subfamily J, member 9##AY157579|IGSF8|93185|immunoglobulin superfamily, member 8##AF311906|IGSF8|93185|immunoglobulin superfamily, member 8##AY044845|IGSF8|93185|immunoglobulin superfamily, member 8	0.911985	CTCF.p2:-23:0.912
chr1	238415768	238415865	reg1021640.p1	6.296	+	AK314151 NM_021186	-361595	-	NM_001035 X98330 Y08218	-1210043	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-1456981	+	TSC_hg19_v1_chr1_+_239550016 AK056349	1134126	+	AF279779 NM_000740	1376556	+	TSC_hg19_v1_chr1_+_240255182 NM_020066	1839361	+	AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_020066|FMN2|56776|formin 2	0.998499	CTCF.p2:-8:0.998
chr4	26789830	26789946	reg1018367.p2	6.296	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-204208	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-297903	-	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	-467206	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	72652	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3932111	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3932306	+	NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7	0.0	
chr8	74361497	74361588	reg1022942.p1	6.296	+	TSC_hg19_v1_chr8_+_74207135 AF456765 BC067131 AY358270	-154273	+	TSC_hg19_v1_chr8_+_74206836 NM_172037	-154733	+	CR456773 L16558 AB529035 BC071671 BC071895 BC087837 BC071894 BC001476 BC006095 X57959 AB055763 AK225246 AK225254 AK291119 AK313365 X52967 BC009599 NM_000971	-155685	-	Y19062 TSC_hg19_v1_chr8_-_74659076 AB210014 AL079285 AK002152 AK126149 AK293496 AK303104 AK314617 BC008369 BC008370	297525	-	TSC_hg19_v1_chr8_-_74659103 AK294466 CR627442 NM_001164380 NM_001164381 NM_001164382 NM_001164383 NM_001164385 NM_014393	297616	-	TSC_hg19_v1_chr8_-_74659707 AK307841 AK293729	298154	-	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)##BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)##AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)##NM_172037|RDH10|157506|retinol dehydrogenase 10 (all-trans)##CR456773|RPL7|6129|ribosomal protein L7##L16558|RPL7|6129|ribosomal protein L7##BC071671|RPL7|6129|ribosomal protein L7##BC071895|RPL7|6129|ribosomal protein L7##BC087837|RPL7|6129|ribosomal protein L7##BC071894|RPL7|6129|ribosomal protein L7##BC006095|RPL7|6129|ribosomal protein L7##X57959|RPL7|6129|ribosomal protein L7##AK225246|RPL7|6129|ribosomal protein L7##AK225254|RPL7|6129|ribosomal protein L7##AK291119|RPL7|6129|ribosomal protein L7##AK313365|RPL7|6129|ribosomal protein L7##X52967|RPL7|6129|ribosomal protein L7##BC009599|RPL7|6129|ribosomal protein L7##NM_000971|RPL7|6129|ribosomal protein L7##Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK126149|LOC729696|729696|uncharacterized LOC729696##AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	0.998271	CTCF.p2:0:0.998
chrX	49049292	49049449	reg1019910.p1	6.296	+	TSC_hg19_v1_chrX_+_49047887 CU687901	-1480	+	TSC_hg19_v1_chrX_-_49042854 AK299407	-6516	-	TSC_hg19_v1_chrX_-_49042840 BT007423 CR457211 DQ891474 DQ894662 AB464065 AJ011654 NM_006150 AK300866 AK314788 BC002468 BC016856	-6580	-	TSC_hg19_v1_chrX_-_49056653 AB464258 CU687900 AK313030 AK094376 AK295524 AK315953 BC064550 NM_003179	7312	-	AF067227 JF701915 AF201304 AJ224874 NM_005183	40431	-	NM_014008 TSC_hg19_v1_chrX_+_49091929	42557	+	AK299407|PRICKLE3|4007|prickle homolog 3 (Drosophila)##BT007423|PRICKLE3|4007|prickle homolog 3 (Drosophila)##CR457211|PRICKLE3|4007|prickle homolog 3 (Drosophila)##DQ891474|PRICKLE3|4007|prickle homolog 3 (Drosophila)##DQ894662|PRICKLE3|4007|prickle homolog 3 (Drosophila)##AJ011654|PRICKLE3|4007|prickle homolog 3 (Drosophila)##NM_006150|PRICKLE3|4007|prickle homolog 3 (Drosophila)##AK300866|PRICKLE3|4007|prickle homolog 3 (Drosophila)##AK314788|PRICKLE3|4007|prickle homolog 3 (Drosophila)##BC002468|PRICKLE3|4007|prickle homolog 3 (Drosophila)##BC016856|PRICKLE3|4007|prickle homolog 3 (Drosophila)##AK313030|SYP|6855|synaptophysin##AK094376|SYP|6855|synaptophysin##AK295524|SYP|6855|synaptophysin##AK315953|SYP|6855|synaptophysin##BC064550|SYP|6855|synaptophysin##NM_003179|SYP|6855|synaptophysin##AF067227|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##JF701915|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##AF201304|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##AJ224874|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##NM_005183|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##NM_014008|CCDC22|28952|coiled-coil domain containing 22	0.975893	CTCF.p2:18:0.976
chr10	104438642	104438782	reg1023140.p2	6.295	+	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	-34428	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	-174893	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	-174993	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	35385	-	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	35633	+	TSC_hg19_v1_chr10_+_104503704 AK300871	64958	+	NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2##AK300871|C10orf26|54838|chromosome 10 open reading frame 26	0.908906	CTCF.p2:-18:0.909
chr1	172350193	172350374	reg1017435.p2	6.295	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-539580	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-599445	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-599469	+	AL035295 NM_139240 BC038410	39545	+	TSC_hg19_v1_chr1_-_172413202 BC006539	62905	-	TSC_hg19_v1_chr1_-_172413207 AK308201	62924	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.154833	
chr11	114645528	114645594	reg1021023.p1	6.294	+	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-96313	+	AK000134 AK225236 TSC_hg19_v1_chr11_-_114466485 NM_001077639 NM_017678	-179083	-	AY358805 TSC_hg19_v1_chr11_-_114466403	-179156	-	AY309502 TSC_hg19_v1_chr11_-_115088658	443087	-	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	729619	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	1998137	-	NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##AK000134|FAM55D|54827|family with sequence similarity 55, member D##AK225236|FAM55D|54827|family with sequence similarity 55, member D##NM_001077639|FAM55D|54827|family with sequence similarity 55, member D##NM_017678|FAM55D|54827|family with sequence similarity 55, member D##AY358805|FAM55D|54827|family with sequence similarity 55, member D##AY309502|CADM1|23705|cell adhesion molecule 1##AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)	0.0	
chr11	17752226	17752338	reg1004460.p1	6.294	+	NM_002478 AK314968 TSC_hg19_v1_chr11_+_17741117 BC000353 X56677 BC064493 AB463907 BT007157	-11063	+	CU677569 TSC_hg19_v1_chr11_-_17565964 AK290788 AK300936 AB018687 BC016057 AF039699 AF039700 AK225614 NM_005709 NM_153676	-186365	-	TSC_hg19_v1_chr11_-_17498427 NM_000352	-253846	-	NM_001112741 NM_004976 AB529092	5237	+	TSC_hg19_v1_chr11_-_18034463 AK294022	282168	-	TSC_hg19_v1_chr11_-_18034595 AJ243950 AJ243951 BC000707 NM_012139	282281	-	NM_002478|MYOD1|4654|myogenic differentiation 1##AK314968|MYOD1|4654|myogenic differentiation 1##X56677|MYOD1|4654|myogenic differentiation 1##BC064493|MYOD1|4654|myogenic differentiation 1##BT007157|MYOD1|4654|myogenic differentiation 1##AK290788|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK300936|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AB018687|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##BC016057|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039699|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039700|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK225614|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_005709|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_153676|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_000352|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##AK294022|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243950|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243951|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC000707|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##NM_012139|SERGEF|26297|secretion regulating guanine nucleotide exchange factor	0.979453	CTCF.p2:-3:0.979
chr1	204463775	204463902	reg1023244.p1	6.294	+	TSC_hg19_v1_chr1_-_204463934 BC094741	-73	-	BC132876 BC136645 BC144342 NM_002646 AK308153	-4340	-	TSC_hg19_v1_chr1_-_204380946 BC065280 AK222877 NM_032833 AK027650 AK303535 AK316092	-82898	-	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	21664	+	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	21772	+	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	190753	-	BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC132876|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC136645|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC144342|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_002646|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AK308153|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC065280|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK222877|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_032833|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK027650|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK303535|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2	0.0	
chr12	7297073	7297253	reg1021991.p1	6.294	+	TSC_hg19_v1_chr12_+_7282990 AK316059 NM_014718 AJ277460 BC111491 AK299177 BC104767 BC112283 AB527393 BC148258	-14039	+	DQ892613 DQ895853 AY007436 AF212239 NM_031491 AK311977 AK096947 AK223378 BC029355	-15733	-	BC128428 AF178985 TSC_hg19_v1_chr12_-_7261802 AK222802 BC062428 AK314299 AK024084 NM_016546	-35335	-	AK292256 NM_001131026	44595	+	TSC_hg19_v1_chr12_+_7342306 Z48054 AK299105 NM_001131023 NM_001131024 NM_001131025 AK302742 AK225126 AK312317 AK316250 AK303515	45191	+	BC010621 X84899 NM_000319 U19721 AB527550 DQ891142 DQ894321 CU679763	45801	+	AK316059|CLSTN3|9746|calsyntenin 3##NM_014718|CLSTN3|9746|calsyntenin 3##AJ277460|CLSTN3|9746|calsyntenin 3##BC111491|CLSTN3|9746|calsyntenin 3##AK299177|CLSTN3|9746|calsyntenin 3##BC104767|CLSTN3|9746|calsyntenin 3##BC112283|CLSTN3|9746|calsyntenin 3##BC148258|CLSTN3|9746|calsyntenin 3##DQ892613|RBP5|83758|retinol binding protein 5, cellular##DQ895853|RBP5|83758|retinol binding protein 5, cellular##AY007436|RBP5|83758|retinol binding protein 5, cellular##AF212239|RBP5|83758|retinol binding protein 5, cellular##NM_031491|RBP5|83758|retinol binding protein 5, cellular##AK311977|RBP5|83758|retinol binding protein 5, cellular##AK096947|RBP5|83758|retinol binding protein 5, cellular##AK223378|RBP5|83758|retinol binding protein 5, cellular##BC029355|RBP5|83758|retinol binding protein 5, cellular##AF178985|C1RL|51279|complement component 1, r subcomponent-like##AK222802|C1RL|51279|complement component 1, r subcomponent-like##BC062428|C1RL|51279|complement component 1, r subcomponent-like##AK314299|C1RL|51279|complement component 1, r subcomponent-like##AK024084|C1RL|51279|complement component 1, r subcomponent-like##NM_016546|C1RL|51279|complement component 1, r subcomponent-like##AK292256|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131026|PEX5|5830|peroxisomal biogenesis factor 5##Z48054|PEX5|5830|peroxisomal biogenesis factor 5##AK299105|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131023|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131024|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131025|PEX5|5830|peroxisomal biogenesis factor 5##AK302742|PEX5|5830|peroxisomal biogenesis factor 5##AK225126|PEX5|5830|peroxisomal biogenesis factor 5##AK312317|PEX5|5830|peroxisomal biogenesis factor 5##AK316250|PEX5|5830|peroxisomal biogenesis factor 5##AK303515|PEX5|5830|peroxisomal biogenesis factor 5##BC010621|PEX5|5830|peroxisomal biogenesis factor 5##X84899|PEX5|5830|peroxisomal biogenesis factor 5##NM_000319|PEX5|5830|peroxisomal biogenesis factor 5##U19721|PEX5|5830|peroxisomal biogenesis factor 5##DQ891142|PEX5|5830|peroxisomal biogenesis factor 5##DQ894321|PEX5|5830|peroxisomal biogenesis factor 5	0.997617	CTCF.p2:49:0.998
chr15	99447835	99447951	reg1021990.p2	6.293	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-255137	+	TSC_hg19_v1_chr15_+_99191767 AB425196	-255922	+	AK097062 AK097062 NM_182562	-390283	-	BC104743 BC104744 BC105686 NM_001102612	100944	-	AK058162 NM_001167902	103130	-	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	197347	+	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein	0.501325	CTCF.p2:6:0.501
chr2	214354941	214355068	reg1022695.p2	6.293	+	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	-205847	+	AK124960 NM_001242575	-206076	-	BC028936 NM_001079526	-338672	-	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	921456	+	AB590656 JF790283 JF790285 JF790287 TSC_hg19_v1_chr2_-_215674408 BC126426 BC126428 AX794378 JF790280 JF790281 JF790282 JF790284 U76638 AK314260 AK301843 JF790286 AK223409 NM_000465	1319355	-	AY033486 NM_015657	1541805	-	BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##JF790283|BARD1|580|BRCA1 associated RING domain 1##JF790285|BARD1|580|BRCA1 associated RING domain 1##JF790287|BARD1|580|BRCA1 associated RING domain 1##BC126426|BARD1|580|BRCA1 associated RING domain 1##BC126428|BARD1|580|BRCA1 associated RING domain 1##AX794378|BARD1|580|BRCA1 associated RING domain 1##JF790280|BARD1|580|BRCA1 associated RING domain 1##JF790281|BARD1|580|BRCA1 associated RING domain 1##JF790282|BARD1|580|BRCA1 associated RING domain 1##JF790284|BARD1|580|BRCA1 associated RING domain 1##U76638|BARD1|580|BRCA1 associated RING domain 1##AK314260|BARD1|580|BRCA1 associated RING domain 1##AK301843|BARD1|580|BRCA1 associated RING domain 1##JF790286|BARD1|580|BRCA1 associated RING domain 1##AK223409|BARD1|580|BRCA1 associated RING domain 1##NM_000465|BARD1|580|BRCA1 associated RING domain 1##AY033486|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_015657|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12	0.168536	
chr4	95542792	95542903	reg1022806.p1	6.293	+	BC026029 AM393306 AM393394 AM393485 AM393621 AM393813 DQ890686 DQ893868 AB587372 CU676108 CU679071 AY598328 BT007328 TSC_hg19_v1_chr4_+_95376500	-166397	+	TSC_hg19_v1_chr4_+_95373092 BC017902 BC008741 AK291898 AK291624 AK304125 AK296980 AL832157 AL832686 AF061258 AL833151 AL833438	-169751	+	TSC_hg19_v1_chr4_+_95373030 AY345240 NM_001011513 NM_001011515 NM_001011516 NM_006457	-169825	+	TSC_hg19_v1_chr4_+_95679109 NM_001203 U89326	136259	+	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	927332	-	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	927529	-	BC026029|PDLIM5|10611|PDZ and LIM domain 5##AM393306|PDLIM5|10611|PDZ and LIM domain 5##AM393394|PDLIM5|10611|PDZ and LIM domain 5##AM393485|PDLIM5|10611|PDZ and LIM domain 5##AM393621|PDLIM5|10611|PDZ and LIM domain 5##AM393813|PDLIM5|10611|PDZ and LIM domain 5##DQ890686|PDLIM5|10611|PDZ and LIM domain 5##DQ893868|PDLIM5|10611|PDZ and LIM domain 5##AY598328|PDLIM5|10611|PDZ and LIM domain 5##BT007328|PDLIM5|10611|PDZ and LIM domain 5##BC017902|PDLIM5|10611|PDZ and LIM domain 5##BC008741|PDLIM5|10611|PDZ and LIM domain 5##AK291898|PDLIM5|10611|PDZ and LIM domain 5##AK291624|PDLIM5|10611|PDZ and LIM domain 5##AK304125|PDLIM5|10611|PDZ and LIM domain 5##AK296980|PDLIM5|10611|PDZ and LIM domain 5##AL832157|PDLIM5|10611|PDZ and LIM domain 5##AL832686|PDLIM5|10611|PDZ and LIM domain 5##AF061258|PDLIM5|10611|PDZ and LIM domain 5##AL833151|PDLIM5|10611|PDZ and LIM domain 5##AL833438|PDLIM5|10611|PDZ and LIM domain 5##AY345240|PDLIM5|10611|PDZ and LIM domain 5##NM_001011513|PDLIM5|10611|PDZ and LIM domain 5##NM_001011515|PDLIM5|10611|PDZ and LIM domain 5##NM_001011516|PDLIM5|10611|PDZ and LIM domain 5##NM_006457|PDLIM5|10611|PDZ and LIM domain 5##NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB##U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)	0.992988	CTCF.p2:0:0.993
chr14	50470148	50470326	reg1021438.p1	6.292	+	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-109831	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-110404	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	-110419	+	AK091232 AX746864 NM_001012706	4000	-	AF390030 NM_001014830	89123	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	113033	-	AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6##AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D	0.014887	
chr19	40661707	40661828	reg1024201.p1	6.292	+	TSC_hg19_v1_chr19_-_40596843 AK091274 AX746890 NM_001010880 AK131328 BC021982 NM_001142577 NM_001142578 NM_001142579	-64955	-	TSC_hg19_v1_chr19_-_40562138 AK127063 NM_001005851	-99641	-	NM_178544 AK122968 AK292528 BC045649	-158782	+	TSC_hg19_v1_chr19_+_40697520 NM_002446 X90846 Z48615	35879	+	TSC_hg19_v1_chr19_-_40724275 AK054935 AK289550 BC029539 NM_152479	62521	-	AK023327 AK301833 NM_024877	70812	-	AK091274|ZNF780A|284323|zinc finger protein 780A##NM_001010880|ZNF780A|284323|zinc finger protein 780A##AK131328|ZNF780A|284323|zinc finger protein 780A##BC021982|ZNF780A|284323|zinc finger protein 780A##NM_001142577|ZNF780A|284323|zinc finger protein 780A##NM_001142578|ZNF780A|284323|zinc finger protein 780A##NM_001142579|ZNF780A|284323|zinc finger protein 780A##AK127063|ZNF780B|163131|zinc finger protein 780B##NM_001005851|ZNF780B|163131|zinc finger protein 780B##NM_178544|ZNF546|339327|zinc finger protein 546##AK122968|ZNF546|339327|zinc finger protein 546##AK292528|ZNF546|339327|zinc finger protein 546##BC045649|ZNF546|339327|zinc finger protein 546##NM_002446|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##X90846|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##Z48615|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##AK054935|TTC9B|148014|tetratricopeptide repeat domain 9B##AK289550|TTC9B|148014|tetratricopeptide repeat domain 9B##BC029539|TTC9B|148014|tetratricopeptide repeat domain 9B##NM_152479|TTC9B|148014|tetratricopeptide repeat domain 9B##AK023327|CNTD2|79935|cyclin N-terminal domain containing 2##AK301833|CNTD2|79935|cyclin N-terminal domain containing 2##NM_024877|CNTD2|79935|cyclin N-terminal domain containing 2	0.01759	
chr2	178977023	178977159	reg1019987.p1	6.292	+	AB038041 NM_001077197	-4026	-	BC112393 BC114431 AB036704 NM_016953 TSC_hg19_v1_chr2_-_178937505 AK309155	-39583	-	AF281865 NM_001077358	-189549	-	AF526533 BC037837 BC066549 NM_152945 TSC_hg19_v1_chr2_+_178977198 AK126575 AB036991 CU688160	120	+	TSC_hg19_v1_chr2_+_179059238 AB208898 NM_001201480 NM_001201481 NM_001201482 NM_032523 BC052259 AK300389 AF323728 AF392448	82133	+	AK093902 AX748360 NM_145739	207879	+	AB038041|PDE11A|50940|phosphodiesterase 11A##NM_001077197|PDE11A|50940|phosphodiesterase 11A##BC112393|PDE11A|50940|phosphodiesterase 11A##BC114431|PDE11A|50940|phosphodiesterase 11A##AB036704|PDE11A|50940|phosphodiesterase 11A##NM_016953|PDE11A|50940|phosphodiesterase 11A##AF281865|PDE11A|50940|phosphodiesterase 11A##NM_001077358|PDE11A|50940|phosphodiesterase 11A##AF526533|RBM45|129831|RNA binding motif protein 45##BC037837|RBM45|129831|RNA binding motif protein 45##BC066549|RBM45|129831|RNA binding motif protein 45##NM_152945|RBM45|129831|RNA binding motif protein 45##AK126575|RBM45|129831|RNA binding motif protein 45##AB036991|RBM45|129831|RNA binding motif protein 45##AB208898|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201480|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201481|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201482|OSBPL6|114880|oxysterol binding protein-like 6##NM_032523|OSBPL6|114880|oxysterol binding protein-like 6##BC052259|OSBPL6|114880|oxysterol binding protein-like 6##AK300389|OSBPL6|114880|oxysterol binding protein-like 6##AF323728|OSBPL6|114880|oxysterol binding protein-like 6##AF392448|OSBPL6|114880|oxysterol binding protein-like 6##AK093902|OSBPL6|114880|oxysterol binding protein-like 6##NM_145739|OSBPL6|114880|oxysterol binding protein-like 6	0.735171	CTCF.p2:-1:0.735
chr4	4262014	4262154	reg1019630.p1	6.292	+	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	-12136	-	BC130430 BC130432 NM_177998	-33467	-	BC044637 TSC_hg19_v1_chr4_-_3957162	-304929	-	TSC_hg19_v1_chr4_-_4291782 AL136750 NM_001145725	29683	-	TSC_hg19_v1_chr4_-_4291848 AK000432 BC015796 AK290750	29766	-	TSC_hg19_v1_chr4_-_4291900 NM_017816	29828	-	BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##AL136750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_001145725|LYAR|55646|Ly1 antibody reactive homolog (mouse)##AK000432|LYAR|55646|Ly1 antibody reactive homolog (mouse)##BC015796|LYAR|55646|Ly1 antibody reactive homolog (mouse)##AK290750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_017816|LYAR|55646|Ly1 antibody reactive homolog (mouse)	0.130411	
chr12	66481165	66481283	reg1003815.p1	6.291	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	-262211	+	TSC_hg19_v1_chr12_+_66218605 AK311399	-262617	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	-263017	+	TSC_hg19_v1_chr12_-_66524536 BC070232 BC006002 BC107780 AK091568 AX747065 NM_032338	43301	-	AB464309 TSC_hg19_v1_chr12_-_66563773 AF182414 AF161526 BC020613 AF113127 AK301359 AF182041 AK075069 AK225158 BC070366 BC052273 BC094852	82530	-	TSC_hg19_v1_chr12_-_66563806 BC004401 NM_016056	82578	-	AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##BC070232|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC006002|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC107780|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AK091568|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##NM_032338|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AF182414|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF161526|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC020613|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF113127|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF182041|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK075069|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK225158|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC070366|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC052273|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC094852|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC004401|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##NM_016056|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4	0.0	
chr7	22893729	22893859	reg1020721.p1	6.291	+	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	-31351	-	TSC_hg19_v1_chr7_+_22767104 X04403	-126676	+	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	-126971	+	AB030241 AK056319 AK297399 TSC_hg19_v1_chr7_-_23053708 AL833296	159901	-	TSC_hg19_v1_chr7_-_23053750 BC018710 NM_032581	159956	-	TSC_hg19_v1_chr7_+_23145396 NM_001031710 NM_001172428 AK297421 AK056390	251578	+	CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##AB030241|FAM126A|84668|family with sequence similarity 126, member A##AK056319|FAM126A|84668|family with sequence similarity 126, member A##AK297399|FAM126A|84668|family with sequence similarity 126, member A##AL833296|FAM126A|84668|family with sequence similarity 126, member A##BC018710|FAM126A|84668|family with sequence similarity 126, member A##NM_032581|FAM126A|84668|family with sequence similarity 126, member A##NM_001031710|KLHL7|55975|kelch-like 7 (Drosophila)##NM_001172428|KLHL7|55975|kelch-like 7 (Drosophila)##AK297421|KLHL7|55975|kelch-like 7 (Drosophila)##AK056390|KLHL7|55975|kelch-like 7 (Drosophila)	0.313071	CTCF.p2:-49:0.313
chr13	97670418	97670522	reg1022444.p1	6.290	+	AK122639 NM_080818 AK313684	-23858	-	AF539426 NM_153456	-927378	+	CU688350 TSC_hg19_v1_chr13_-_96705666 BC125233 BC125234 AF227906 BC017759 BC067807 BC111021 AK001735 BC032302 NM_020121	-964820	-	TSC_hg19_v1_chr13_+_97794087 CR749802	123612	+	TSC_hg19_v1_chr13_+_97874586 AK074610 NM_144778 NM_207304 AK291727 AF061261 AF491866 BC032426 BC104038 BC104039 BC104040 AK315844	204125	+	TSC_hg19_v1_chr13_+_97874708 BC020418	204244	+	AK122639|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##NM_080818|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AK313684|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##BC125233|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC125234|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF227906|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC017759|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC067807|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC111021|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AK001735|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC032302|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##NM_020121|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_144778|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_207304|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK291727|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF061261|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF491866|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC032426|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104038|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104039|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104040|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK315844|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC020418|MBNL2|10150|muscleblind-like 2 (Drosophila)	0.962916	CTCF.p2:-5:0.963
chr3	133183539	133183633	reg1021232.p1	6.290	+	NM_003571 BC113518 BC113520 HQ258421 U48224	-64728	+	TSC_hg19_v1_chr3_+_132757234 AY358381 BC000568	-426352	+	NM_001136469 NM_023943 TSC_hg19_v1_chr3_+_132757202	-426399	+	TSC_hg19_v1_chr3_+_133292443 NM_001134422 NM_017548	108890	+	TSC_hg19_v1_chr3_+_133292588 AF103803	108986	+	TSC_hg19_v1_chr3_+_133292835 BC007338	109208	+	NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin##HQ258421|BFSP2|8419|beaded filament structural protein 2, phakinin##U48224|BFSP2|8419|beaded filament structural protein 2, phakinin##AY358381|TMEM108|66000|transmembrane protein 108##BC000568|TMEM108|66000|transmembrane protein 108##NM_001136469|TMEM108|66000|transmembrane protein 108##NM_023943|TMEM108|66000|transmembrane protein 108##NM_001134422|CDV3|55573|CDV3 homolog (mouse)##NM_017548|CDV3|55573|CDV3 homolog (mouse)##AF103803|CDV3|55573|CDV3 homolog (mouse)##BC007338|CDV3|55573|CDV3 homolog (mouse)	0.152184	
chr6	103297891	103297993	reg1022146.p1	6.290	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	-1451037	+	BC037954 TSC_hg19_v1_chr6_+_101846686	-1451265	+	HM149340 TSC_hg19_v1_chr6_+_101841583	-1456436	+	TSC_hg19_v1_chr6_-_105307736 AK291760	2009783	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	2009820	-	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	2009846	-	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	0.949024	CTCF.p2:15:0.949
chr10	18527947	18528063	reg1022744.p1	6.289	+	NM_201593 NM_201596 NM_201597 S60415 BC136409 AF137376 AF423191 AY393860 AY675091 AK296471 AK311694 AK307526 NM_001167945 NM_201571 NM_201572 AK293837	-98298	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	-287176	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	-429612	+	NM_000724 AB208917 U95019	21635	+	AK310943 NM_201590	101608	+	NM_201570 AK299873 AK295113	161558	+	NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK310943|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201590|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	0.995229	CTCF.p2:10:0.995
chr1	168054079	168054239	reg1021866.p1	6.289	+	AL035304 NM_001143674 NM_015415	-147868	-	AF116725 AY766164 TSC_hg19_v1_chr1_+_167906117 DQ768089 AB385156	-148059	+	TSC_hg19_v1_chr1_+_167905933 AK297847 AK226181	-148206	+	AK056040 BC028163 NM_153832	51462	-	AK298797 TSC_hg19_v1_chr1_-_168105936	51761	-	AK299634 TSC_hg19_v1_chr1_-_168106613	52415	-	AL035304|BRP44|25874|brain protein 44##NM_001143674|BRP44|25874|brain protein 44##NM_015415|BRP44|25874|brain protein 44##AF116725|DCAF6|55827|DDB1 and CUL4 associated factor 6##AY766164|DCAF6|55827|DDB1 and CUL4 associated factor 6##DQ768089|DCAF6|55827|DDB1 and CUL4 associated factor 6##AK297847|DCAF6|55827|DDB1 and CUL4 associated factor 6##AK226181|DCAF6|55827|DDB1 and CUL4 associated factor 6##AK056040|GPR161|23432|G protein-coupled receptor 161##BC028163|GPR161|23432|G protein-coupled receptor 161##NM_153832|GPR161|23432|G protein-coupled receptor 161##AK298797|GPR161|23432|G protein-coupled receptor 161##AK299634|GPR161|23432|G protein-coupled receptor 161	0.998412	CTCF.p2:9:0.998
chr1	201450974	201451084	reg1008802.p1	6.288	+	BC014390 TSC_hg19_v1_chr1_-_201438317 AF151100 AK075179 AK222644 BC068273 NM_012396	-12764	-	AJ315823 BC012601 TSC_hg19_v1_chr1_-_201390859 AK223588 J04760 AK311896 AL831820 AL831975 BC012600 BX510903 NM_003281	-60170	-	TSC_hg19_v1_chr1_-_201368726 BC071890	-82288	-	AK293053 NM_001193572	14671	-	AK290133 NM_001193571	24937	-	TSC_hg19_v1_chr1_-_201476239 BC007492 M33146 BC032493	25200	-	BC014390|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AF151100|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK075179|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AK222644|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##BC068273|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##NM_012396|PHLDA3|23612|pleckstrin homology-like domain, family A, member 3##AJ315823|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC012601|TNNI1|7135|troponin I type 1 (skeletal, slow)##AK223588|TNNI1|7135|troponin I type 1 (skeletal, slow)##J04760|TNNI1|7135|troponin I type 1 (skeletal, slow)##AK311896|TNNI1|7135|troponin I type 1 (skeletal, slow)##AL831820|TNNI1|7135|troponin I type 1 (skeletal, slow)##AL831975|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC012600|TNNI1|7135|troponin I type 1 (skeletal, slow)##BX510903|TNNI1|7135|troponin I type 1 (skeletal, slow)##NM_003281|TNNI1|7135|troponin I type 1 (skeletal, slow)##BC071890|LAD1|3898|ladinin 1##AK293053|CSRP1|1465|cysteine and glycine-rich protein 1##NM_001193572|CSRP1|1465|cysteine and glycine-rich protein 1##AK290133|CSRP1|1465|cysteine and glycine-rich protein 1##NM_001193571|CSRP1|1465|cysteine and glycine-rich protein 1##BC007492|CSRP1|1465|cysteine and glycine-rich protein 1##M33146|CSRP1|1465|cysteine and glycine-rich protein 1##BC032493|CSRP1|1465|cysteine and glycine-rich protein 1	0.788473	CTCF.p2:13:0.788
chr19	11564767	11564874	reg1022298.p2	6.288	+	BC080533 BC011875 TSC_hg19_v1_chr19_-_11564576	-248	-	AB385574 AF144075 TSC_hg19_v1_chr19_+_11546995 BC013586	-17851	+	TSC_hg19_v1_chr19_+_11546486 AK290433	-18278	+	TSC_hg19_v1_chr19_-_11565617 BC068222	808	-	AY036909 L26405 D26158 BC014144 NM_001420 NM_032281 TSC_hg19_v1_chr19_-_11591862	26833	-	TSC_hg19_v1_chr19_-_11616637 HQ258023 AY072704 BC014187 AK314986 BC016816	51707	-	BC080533|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC011875|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##AF144075|PRKCSH|5589|protein kinase C substrate 80K-H##BC013586|PRKCSH|5589|protein kinase C substrate 80K-H##AK290433|PRKCSH|5589|protein kinase C substrate 80K-H##AY036909|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##L26405|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##D26158|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC014144|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_001420|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_032281|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##HQ258023|ZNF653|115950|zinc finger protein 653##AY072704|ZNF653|115950|zinc finger protein 653##BC014187|ZNF653|115950|zinc finger protein 653##AK314986|ZNF653|115950|zinc finger protein 653##BC016816|ZNF653|115950|zinc finger protein 653	0.99815	CTCF.p2:11:0.998
chr5	106211605	106211741	reg1023459.p1	6.287	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-3313192	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-3617216	+	BC024591 NM_015216 AB463068	-3746399	+	AK308672 NM_001962 U26403	794917	-	TSC_hg19_v1_chr5_-_107717106 AK126722	1505457	-	BC063316 NM_001163315	1506125	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.975707	CTCF.p2:6:0.976
chr5	825845	825941	reg1022295.p2	6.287	+	TSC_hg19_v1_chr5_-_693430 AB017016 BC040496 AK098392 NM_007030	-132432	-	TSC_hg19_v1_chr5_+_612458 AK001427 BC000132 AB040952 AB384228 AK299072 CU674056 BC001750	-213427	+	NM_018140 TSC_hg19_v1_chr5_+_612451	-213465	+	AK023215 NM_024786	25207	-	TSC_hg19_v1_chr5_-_892666 BX648703 AK297573 AK301987 NM_001009877	66756	-	TSC_hg19_v1_chr5_-_892898 AY211916	66997	-	AB017016|TPPP|11076|tubulin polymerization promoting protein##BC040496|TPPP|11076|tubulin polymerization promoting protein##AK098392|TPPP|11076|tubulin polymerization promoting protein##NM_007030|TPPP|11076|tubulin polymerization promoting protein##AK001427|CEP72|55722|centrosomal protein 72kDa##BC000132|CEP72|55722|centrosomal protein 72kDa##AB040952|CEP72|55722|centrosomal protein 72kDa##AK299072|CEP72|55722|centrosomal protein 72kDa##BC001750|CEP72|55722|centrosomal protein 72kDa##NM_018140|CEP72|55722|centrosomal protein 72kDa##AK023215|ZDHHC11|79844|zinc finger, DHHC-type containing 11##NM_024786|ZDHHC11|79844|zinc finger, DHHC-type containing 11##BX648703|BRD9|65980|bromodomain containing 9##AK297573|BRD9|65980|bromodomain containing 9##AK301987|BRD9|65980|bromodomain containing 9##NM_001009877|BRD9|65980|bromodomain containing 9##AY211916|BRD9|65980|bromodomain containing 9	0.849723	CTCF.p2:-9:0.850
chr14	68779778	68779959	reg1018192.p2	6.286	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-493348	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-496569	-	AK315462 NM_152443	-611266	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	479852	-	NM_001244698 NM_004926	480762	-	NM_001244701 AB528867	483116	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr5	135700140	135700239	reg1022850.p1	6.286	+	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-231605	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-231660	+	TSC_hg19_v1_chr5_+_135364731 AB590111 DQ892178 EU176690 CU678832 BT009820	-335455	+	NM_001167576 NM_001167577 NM_020389	974	-	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	1134052	-	TSC_hg19_v1_chr5_-_136834420 AK094489	1134238	-	AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ892178|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##EU176690|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##BT009820|TGFBI|7045|transforming growth factor, beta-induced, 68kDa##NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.977465	CTCF.p2:-6:0.977
chr6	84994257	84994388	reg1023495.p1	6.286	+	AB023226 AK308190 BC063632 NM_014895 TSC_hg19_v1_chr6_-_84937334	-56998	-	TSC_hg19_v1_chr6_+_84743459 AK090775 AX746611 NM_138409 BC010003 AK307078 AK292736 BC039855	-250916	+	TSC_hg19_v1_chr6_+_84569438 AB527313 AM393033	-424858	+	TSC_hg19_v1_chr6_-_85472330 AJ010278	478003	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	478848	-	HQ258462 NM_001080508 BC157841 BC132715	479603	-	AB023226|KIAA1009|22832|KIAA1009##AK308190|KIAA1009|22832|KIAA1009##BC063632|KIAA1009|22832|KIAA1009##NM_014895|KIAA1009|22832|KIAA1009##AK090775|MRAP2|112609|melanocortin 2 receptor accessory protein 2##NM_138409|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC010003|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK307078|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AK292736|MRAP2|112609|melanocortin 2 receptor accessory protein 2##BC039855|MRAP2|112609|melanocortin 2 receptor accessory protein 2##AM393033|CYB5R4|51167|cytochrome b5 reductase 4##AJ010278|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18##HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18	0.917714	CTCF.p2:-17:0.918
chr1	6706661	6706785	reg1023231.p2	6.285	+	NM_001195752 NM_138350 AK096217 BC022081 DQ891670 DQ894856	-21480	+	BC092427 NM_001195753	-21799	+	BC038516 NM_153812 TSC_hg19_v1_chr1_+_6673814 AK097715 AK315110	-32937	+	AL833841 BC008772 TSC_hg19_v1_chr1_-_6761875 CU675235 CU680804 BC006086 AK294539 AF306694 AK001599 BC014145 AY336749	55134	-	AF306695 TSC_hg19_v1_chr1_-_6761883	55159	-	TSC_hg19_v1_chr1_-_6761903 NM_018198	55208	-	NM_001195752|THAP3|90326|THAP domain containing, apoptosis associated protein 3##NM_138350|THAP3|90326|THAP domain containing, apoptosis associated protein 3##AK096217|THAP3|90326|THAP domain containing, apoptosis associated protein 3##BC022081|THAP3|90326|THAP domain containing, apoptosis associated protein 3##DQ891670|THAP3|90326|THAP domain containing, apoptosis associated protein 3##DQ894856|THAP3|90326|THAP domain containing, apoptosis associated protein 3##BC092427|THAP3|90326|THAP domain containing, apoptosis associated protein 3##NM_001195753|THAP3|90326|THAP domain containing, apoptosis associated protein 3##BC038516|PHF13|148479|PHD finger protein 13##NM_153812|PHF13|148479|PHD finger protein 13##AK097715|PHF13|148479|PHD finger protein 13##AK315110|PHF13|148479|PHD finger protein 13##AL833841|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC008772|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC006086|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AK294539|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306694|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AK001599|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC014145|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AY336749|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11	0.535652	CTCF.p2:36:0.536
chr17	66053743	66053863	reg1021456.p1	6.285	+	TSC_hg19_v1_chr17_+_66031889 BC034443	-21915	+	TSC_hg19_v1_chr17_+_66031850 NM_002266 U09559 U28386 AK024833 AK058111 AK291954 BC005978 BC013257 BC053343 BC146905	-21963	+	BC105124 BC112073 BC036760 TSC_hg19_v1_chr17_-_65989703 AK026583 NM_181655 NM_181656	-64130	-	TSC_hg19_v1_chr17_+_66097706 BC045718	43895	+	NM_001033569 NM_001033570 NM_001033571 NM_001033572 NM_001033574 NM_016627 TSC_hg19_v1_chr17_+_66244216 BC056271 BC050709	190377	+	TSC_hg19_v1_chr17_+_66244233 AF208856	190440	+	BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC105124|C17orf58|284018|chromosome 17 open reading frame 58##BC112073|C17orf58|284018|chromosome 17 open reading frame 58##BC036760|C17orf58|284018|chromosome 17 open reading frame 58##AK026583|C17orf58|284018|chromosome 17 open reading frame 58##NM_181655|C17orf58|284018|chromosome 17 open reading frame 58##NM_181656|C17orf58|284018|chromosome 17 open reading frame 58##BC045718|LOC100499466|100499466|uncharacterized LOC100499466##NM_001033569|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033570|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033571|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033572|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033574|AMZ2|51321|archaelysin family metallopeptidase 2##NM_016627|AMZ2|51321|archaelysin family metallopeptidase 2##BC056271|AMZ2|51321|archaelysin family metallopeptidase 2##BC050709|AMZ2|51321|archaelysin family metallopeptidase 2	0.300652	CTCF.p2:5:0.301
chr7	73280604	73280725	reg1022269.p1	6.285	+	AY372053 BC030643 NM_182504 GQ129394 GQ129395 AY372054	-5140	+	TSC_hg19_v1_chr7_-_73256847 AK301597 AF534110 NM_152559 AY354928	-23802	-	NM_001305 TSC_hg19_v1_chr7_+_73245327 AK026651 AK124076 BC000671 AB000712	-35393	+	NM_000501 NM_001081752 NM_001081753 NM_001081754 NM_001081755 AK075554 TSC_hg19_v1_chr7_+_73442441 AK075494	161769	+	TSC_hg19_v1_chr7_+_73442462 AK125511 AK130894	161792	+	TSC_hg19_v1_chr7_+_73442469 M36860 X52896	161805	+	AY372053|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##BC030643|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##NM_182504|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129394|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129395|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##AY372054|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_001305|CLDN4|1364|claudin 4##AK026651|CLDN4|1364|claudin 4##AK124076|CLDN4|1364|claudin 4##BC000671|CLDN4|1364|claudin 4##AB000712|CLDN4|1364|claudin 4##NM_000501|ELN|2006|elastin##NM_001081752|ELN|2006|elastin##NM_001081753|ELN|2006|elastin##NM_001081754|ELN|2006|elastin##NM_001081755|ELN|2006|elastin##AK075554|ELN|2006|elastin##AK075494|ELN|2006|elastin##AK125511|ELN|2006|elastin##AK130894|ELN|2006|elastin##M36860|ELN|2006|elastin##X52896|ELN|2006|elastin	0.677535	CTCF.p2:-10:0.678
chr8	143897846	143897965	reg1022525.p2	6.285	+	CU689150 BC022806 X82693 AK298639 AK312164 BC031330 NM_003695	-29936	-	NM_023946 NM_177457	-38267	-	TSC_hg19_v1_chr8_-_143859244 AF321824 BC032306	-38658	-	D84290 NM_002066 BC126336 BC126338	18316	+	X55764 AF478474 BC096285 BC096286 BC096287 NM_000497 NM_001026213	63328	-	AB463555 NM_000498 X54741	101351	-	BC022806|LY6D|8581|lymphocyte antigen 6 complex, locus D##X82693|LY6D|8581|lymphocyte antigen 6 complex, locus D##AK312164|LY6D|8581|lymphocyte antigen 6 complex, locus D##BC031330|LY6D|8581|lymphocyte antigen 6 complex, locus D##NM_003695|LY6D|8581|lymphocyte antigen 6 complex, locus D##NM_023946|LYNX1|66004|Ly6/neurotoxin 1##NM_177457|LYNX1|66004|Ly6/neurotoxin 1##AF321824|LYNX1|66004|Ly6/neurotoxin 1##D84290|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##NM_002066|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126336|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126338|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##X55764|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##AF478474|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096285|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096286|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096287|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_000497|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_001026213|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_000498|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##X54741|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2	0.56979	CTCF.p2:-58:0.570
chr12	56435377	56435475	reg1020518.p2	6.284	+	NM_022465 AK122880	-20667	+	TSC_hg19_v1_chr12_+_56391069 NM_000456 NM_001032386 NM_001032387 AK312763 AK309669	-44357	+	AK292597 AK296517 TSC_hg19_v1_chr12_+_56367884 BC065298 BC056422	-67518	+	NM_001029 BC002604	277	+	NM_001982 M34309 NM_001005915 TSC_hg19_v1_chr12_+_56473925	38441	+	TSC_hg19_v1_chr12_+_56473948 AK300909 AK294719 AK291681 BC082992 M29366 S61953 BC002706 CU678138 BT007226	38588	+	NM_022465|IKZF4|64375|IKAROS family zinc finger 4 (Eos)##AK122880|IKZF4|64375|IKAROS family zinc finger 4 (Eos)##NM_000456|SUOX|6821|sulfite oxidase##NM_001032386|SUOX|6821|sulfite oxidase##NM_001032387|SUOX|6821|sulfite oxidase##AK312763|SUOX|6821|sulfite oxidase##AK292597|RAB5B|5869|RAB5B, member RAS oncogene family##AK296517|RAB5B|5869|RAB5B, member RAS oncogene family##BC065298|RAB5B|5869|RAB5B, member RAS oncogene family##BC056422|RAB5B|5869|RAB5B, member RAS oncogene family##NM_001029|RPS26|6231|ribosomal protein S26##BC002604|RPS26|6231|ribosomal protein S26##NM_001982|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##M34309|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##NM_001005915|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##AK300909|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##AK294719|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##AK291681|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##BC082992|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##M29366|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##S61953|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##BC002706|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##BT007226|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	0.047894	
chr18	74693565	74693709	reg1023624.p2	6.284	+	BC130034 TSC_hg19_v1_chr18_-_74692098	-1607	-	AF085243 AF085244 NM_007345	-157522	+	TSC_hg19_v1_chr18_+_74534512 BX648028	-159127	+	AK074315 TSC_hg19_v1_chr18_-_74728814	35119	-	CR536534 CR541919 TSC_hg19_v1_chr18_-_74729012 AK296492 M30515 M30516 BC008749 BC101771 BC101773 BC143348 BC143350 M30047 BC080654 M13577 AK289893 AK098402 AK128788 CR627018 AK128770 BC068550	35358	-	TSC_hg19_v1_chr18_-_74729052 AK314553 NM_001025081 NM_001025090 NM_001025092 NM_002385 AK293922	35430	-	BC130034|MBP|4155|myelin basic protein##AF085243|ZNF236|7776|zinc finger protein 236##AF085244|ZNF236|7776|zinc finger protein 236##NM_007345|ZNF236|7776|zinc finger protein 236##BX648028|ZNF236|7776|zinc finger protein 236##AK074315|MBP|4155|myelin basic protein##CR536534|MBP|4155|myelin basic protein##CR541919|MBP|4155|myelin basic protein##M30515|MBP|4155|myelin basic protein##M30516|MBP|4155|myelin basic protein##BC008749|MBP|4155|myelin basic protein##BC101771|MBP|4155|myelin basic protein##BC101773|MBP|4155|myelin basic protein##BC143348|MBP|4155|myelin basic protein##BC143350|MBP|4155|myelin basic protein##M30047|MBP|4155|myelin basic protein##BC080654|MBP|4155|myelin basic protein##M13577|MBP|4155|myelin basic protein##AK289893|MBP|4155|myelin basic protein##AK098402|MBP|4155|myelin basic protein##AK128788|MBP|4155|myelin basic protein##CR627018|MBP|4155|myelin basic protein##AK128770|MBP|4155|myelin basic protein##BC068550|MBP|4155|myelin basic protein##AK314553|MBP|4155|myelin basic protein##NM_001025081|MBP|4155|myelin basic protein##NM_001025090|MBP|4155|myelin basic protein##NM_001025092|MBP|4155|myelin basic protein##NM_002385|MBP|4155|myelin basic protein##AK293922|MBP|4155|myelin basic protein	0.0	
chr4	1731582	1731708	reg1020678.p2	6.284	+	TSC_hg19_v1_chr4_+_1723248 AK302463 AK225631 BC106071 AF093543 AF479620 AJ243997 BC111771	-8377	+	TSC_hg19_v1_chr4_+_1723215 NM_006342	-8428	+	TSC_hg19_v1_chr4_-_1722981 BC126370 BC009331 BC018921 NM_001127266 NM_138385	-8614	-	TSC_hg19_v1_chr4_+_1795019 AB209441 NM_000142 NM_001163213 NM_022965	63381	+	DQ893606 AK293572 TSC_hg19_v1_chr4_-_1857827 BC014500 BC021208 AF061025 NM_012318	126186	-	AK289697 TSC_hg19_v1_chr4_+_1873132 NM_001042424	141439	+	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3##NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC126370|TMEM129|92305|transmembrane protein 129##BC009331|TMEM129|92305|transmembrane protein 129##BC018921|TMEM129|92305|transmembrane protein 129##NM_001127266|TMEM129|92305|transmembrane protein 129##NM_138385|TMEM129|92305|transmembrane protein 129##AB209441|FGFR3|2261|fibroblast growth factor receptor 3##NM_000142|FGFR3|2261|fibroblast growth factor receptor 3##NM_001163213|FGFR3|2261|fibroblast growth factor receptor 3##NM_022965|FGFR3|2261|fibroblast growth factor receptor 3##DQ893606|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK293572|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC014500|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC021208|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AF061025|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##NM_012318|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK289697|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_001042424|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	0.305277	CTCF.p2:7:0.305
chr10	12824588	12824704	reg1020972.p1	6.283	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-432869	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-432929	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	-433071	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	219053	-	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	317499	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	378922	+	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10	0.112535	
chr1	25349423	25349603	reg1021105.p2	6.283	+	BC013362 AK310945 NM_001031680 AF022726	-57971	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-92727	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-92774	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	209474	-	BC065040 TSC_hg19_v1_chr1_-_25573922	224410	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	224460	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr21	31416906	31417077	reg1022364.p1	6.283	+	L19058 NM_000830 NM_175611 AK296404 BC028238	-104702	-	AF026199 NM_206866	-745255	+	TSC_hg19_v1_chr21_+_30671242 AK313791 BC063307	-745750	+	BC101503 BC101505 NM_012131 AY358094	122015	-	AB590283 CU676754 DQ892002 DQ895192 BC058004 AY358707 BC020866 AK223512 AK022269 NM_199328	171364	-	AM238513 AB096935 NM_001085455	238271	-	L19058|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_000830|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_175611|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##AK296404|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC028238|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AK313791|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC063307|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC101503|CLDN17|26285|claudin 17##BC101505|CLDN17|26285|claudin 17##NM_012131|CLDN17|26285|claudin 17##AY358094|CLDN17|26285|claudin 17##DQ892002|CLDN8|9073|claudin 8##DQ895192|CLDN8|9073|claudin 8##BC058004|CLDN8|9073|claudin 8##AY358707|CLDN8|9073|claudin 8##BC020866|CLDN8|9073|claudin 8##AK223512|CLDN8|9073|claudin 8##AK022269|CLDN8|9073|claudin 8##NM_199328|CLDN8|9073|claudin 8##AM238513|KRTAP24-1|643803|keratin associated protein 24-1##AB096935|KRTAP24-1|643803|keratin associated protein 24-1##NM_001085455|KRTAP24-1|643803|keratin associated protein 24-1	0.991854	CTCF.p2:-11:0.992
chr4	5792121	5792221	reg1019491.p2	6.283	+	TSC_hg19_v1_chr4_+_5712929 AF216184 AF216185 NM_153717 BC085608 AF239742	-79174	+	AY152402 AY152403 NM_001166136	-80897	-	AY185210 NM_147127 TSC_hg19_v1_chr4_-_5710299	-81871	-	AK091696 TSC_hg19_v1_chr4_-_5828628	36437	-	BT006806 CU674102 DQ892528 DQ895740 TSC_hg19_v1_chr4_-_5889997	97825	-	D78012 TSC_hg19_v1_chr4_-_5890210 AK127754 BC000252 BC007613 AK309379	98018	-	AF216184|EVC|2121|Ellis van Creveld syndrome##AF216185|EVC|2121|Ellis van Creveld syndrome##NM_153717|EVC|2121|Ellis van Creveld syndrome##BC085608|EVC|2121|Ellis van Creveld syndrome##AF239742|EVC|2121|Ellis van Creveld syndrome##AY152402|EVC2|132884|Ellis van Creveld syndrome 2##AY152403|EVC2|132884|Ellis van Creveld syndrome 2##NM_001166136|EVC2|132884|Ellis van Creveld syndrome 2##AY185210|EVC2|132884|Ellis van Creveld syndrome 2##NM_147127|EVC2|132884|Ellis van Creveld syndrome 2##AK091696|CRMP1|1400|collapsin response mediator protein 1##BT006806|CRMP1|1400|collapsin response mediator protein 1##DQ892528|CRMP1|1400|collapsin response mediator protein 1##DQ895740|CRMP1|1400|collapsin response mediator protein 1##D78012|CRMP1|1400|collapsin response mediator protein 1##AK127754|CRMP1|1400|collapsin response mediator protein 1##BC000252|CRMP1|1400|collapsin response mediator protein 1##BC007613|CRMP1|1400|collapsin response mediator protein 1##AK309379|CRMP1|1400|collapsin response mediator protein 1	0.253092	CTCF.p2:6:0.253
chr5	6480411	6480511	reg1022535.p1	6.282	+	TSC_hg19_v1_chr5_+_6449114 AK057805	-31272	+	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	-31608	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	-101811	-	TSC_hg19_v1_chr5_-_6633158 AK291144 BC137083 AK298980	152693	-	TSC_hg19_v1_chr5_-_6633411 AK055456 AB255451 NM_001193455 NM_017755	152948	-	NM_001047 TSC_hg19_v1_chr5_+_6633508	153049	+	AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##AK291144|NSUN2|54888|NOP2/Sun domain family, member 2##BC137083|NSUN2|54888|NOP2/Sun domain family, member 2##AK298980|NSUN2|54888|NOP2/Sun domain family, member 2##AK055456|NSUN2|54888|NOP2/Sun domain family, member 2##AB255451|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001193455|NSUN2|54888|NOP2/Sun domain family, member 2##NM_017755|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001047|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)	0.0	
chr11	30149999	30150125	reg1022875.p1	6.281	+	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	-111531	-	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-2018209	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-2020184	+	NM_000510 NM_001018080	102500	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	194590	+	CU689190 NM_001584 U57911	451917	-	M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46##NM_001584|MPPED2|744|metallophosphoesterase domain containing 2##U57911|MPPED2|744|metallophosphoesterase domain containing 2	0.942246	CTCF.p2:4:0.942
chr17	4890662	4890842	reg1023122.p1	6.281	+	AL831849 NM_001171167 NM_001171168 TSC_hg19_v1_chr17_-_4890732	-52	-	BC007819 BC011934 TSC_hg19_v1_chr17_-_4871113 AF047437 AK312174 NM_004890	-19641	-	NM_001193503 NM_001976 NM_053013 TSC_hg19_v1_chr17_+_4854406 AK300662 AK300673 AK300709 AK309864 BC017249	-36348	+	AB020716 BC167148 BC167149 BC167151 BC167160 EU832136 EU832229 TSC_hg19_v1_chr17_-_4890947 AK302528 AL833974 BC142695 NM_001171166 NM_015099	200	-	AY601906 AY601907 NM_001167985 NM_001167986 NM_001167987 NM_213726	10152	-	TSC_hg19_v1_chr17_+_4901226 NM_006612 AB014606 BC034993 AK307401	10558	+	AL831849|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171167|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171168|CAMTA2|23125|calmodulin binding transcription activator 2##BC007819|SPAG7|9552|sperm associated antigen 7##BC011934|SPAG7|9552|sperm associated antigen 7##AF047437|SPAG7|9552|sperm associated antigen 7##AK312174|SPAG7|9552|sperm associated antigen 7##NM_004890|SPAG7|9552|sperm associated antigen 7##NM_001193503|ENO3|2027|enolase 3 (beta, muscle)##NM_001976|ENO3|2027|enolase 3 (beta, muscle)##NM_053013|ENO3|2027|enolase 3 (beta, muscle)##AK300662|ENO3|2027|enolase 3 (beta, muscle)##AK300673|ENO3|2027|enolase 3 (beta, muscle)##AK300709|ENO3|2027|enolase 3 (beta, muscle)##AK309864|ENO3|2027|enolase 3 (beta, muscle)##BC017249|ENO3|2027|enolase 3 (beta, muscle)##AB020716|CAMTA2|23125|calmodulin binding transcription activator 2##BC167148|CAMTA2|23125|calmodulin binding transcription activator 2##BC167149|CAMTA2|23125|calmodulin binding transcription activator 2##BC167151|CAMTA2|23125|calmodulin binding transcription activator 2##BC167160|CAMTA2|23125|calmodulin binding transcription activator 2##EU832136|CAMTA2|23125|calmodulin binding transcription activator 2##EU832229|CAMTA2|23125|calmodulin binding transcription activator 2##AK302528|CAMTA2|23125|calmodulin binding transcription activator 2##AL833974|CAMTA2|23125|calmodulin binding transcription activator 2##BC142695|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171166|CAMTA2|23125|calmodulin binding transcription activator 2##NM_015099|CAMTA2|23125|calmodulin binding transcription activator 2##AY601906|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##AY601907|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167985|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167986|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167987|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_213726|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_006612|KIF1C|10749|kinesin family member 1C##AB014606|KIF1C|10749|kinesin family member 1C##BC034993|KIF1C|10749|kinesin family member 1C##AK307401|KIF1C|10749|kinesin family member 1C	0.124177	
chr7	3240269	3240376	reg1023131.p1	6.281	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	-156860	-	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-356514	-	AK289723 AB075830 BC146753 NM_133463	-521164	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	100677	+	TSC_hg19_v1_chr7_+_4721925 NM_001037165	1481516	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	1481929	+	AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##NM_001037165|FOXK1|221937|forkhead box K1##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1	0.9583	CTCF.p2:10:0.958
chr8	105342199	105342376	reg1023143.p1	6.281	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	-510712	+	AK126939 NM_001100117	-829312	+	TSC_hg19_v1_chr8_+_104427659 AK001874	-914622	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	9765	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	136928	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	258888	-	NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK001874|DCAF13|25879|DDB1 and CUL4 associated factor 13##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12	0.0	
chrX	134597991	134598132	reg1024269.p1	6.281	+	BC030620 TSC_hg19_v1_chrX_+_134555878 BC051704	-42187	+	AY927530 NM_152695 TSC_hg19_v1_chrX_+_134478720 AK314344 AK074194 AL833407 AY280801 BC060768 BC065938 AL833109	-119337	+	TSC_hg19_v1_chrX_-_134478038 AL831984 BC029787	-120058	-	TSC_hg19_v1_chrX_+_134654584 BX648113 NM_182540 AK096544 AL833319	56508	+	TSC_hg19_v1_chrX_+_134654737 BC140715 AK308423	56670	+	AY743709 NM_001017417 BC140735 BC140926 BC144437 BC140913	249173	+	BC030620|LINC00086|399668|long intergenic non-protein coding RNA 86##BC051704|LINC00086|399668|long intergenic non-protein coding RNA 86##AY927530|ZNF449|203523|zinc finger protein 449##NM_152695|ZNF449|203523|zinc finger protein 449##AK314344|ZNF449|203523|zinc finger protein 449##AK074194|ZNF449|203523|zinc finger protein 449##AL833407|ZNF449|203523|zinc finger protein 449##AY280801|ZNF449|203523|zinc finger protein 449##BC060768|ZNF449|203523|zinc finger protein 449##BC065938|ZNF449|203523|zinc finger protein 449##AL833109|ZNF449|203523|zinc finger protein 449##AL831984|ZNF75D|7626|zinc finger protein 75D##BC029787|ZNF75D|7626|zinc finger protein 75D##BX648113|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##NM_182540|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK096544|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AL833319|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BC140715|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK308423|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AY743709|CT45A1|541466|cancer/testis antigen family 45, member A1##NM_001017417|CT45A1|541466|cancer/testis antigen family 45, member A1##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1	0.989093	CTCF.p2:-18:0.989
chr15	31780114	31780251	reg1004634.p1	6.280	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-160844	+	NM_001243538	-257133	-	GQ502181 HM135791 NM_001252020	-326754	-	AJ430383 NM_130901	167359	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	382647	-	TSC_hg19_v1_chr15_-_32162898 AK126002	382761	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.826874	CTCF.p2:25:0.827
chr4	114830111	114830254	reg1025600.p1	6.280	+	TSC_hg19_v1_chr4_-_114682923 NM_001221 NM_172114 NM_172115 NM_172127 NM_172128 NM_172129	-147212	-	TSC_hg19_v1_chr4_-_114682619 AK055642 AB209288	-147526	-	BC022558 TSC_hg19_v1_chr4_-_114682567	-147616	-	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	70657	-	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	689401	+	NM_003360 U30930	713340	+	NM_001221|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172114|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172115|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172127|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172128|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172129|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK055642|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AB209288|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC022558|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8	0.992796	CTCF.p2:17:0.993
chrX	117778492	117778606	reg1022266.p1	6.280	+	AY692226 NM_144658 TSC_hg19_v1_chrX_+_117629874	-148677	+	TSC_hg19_v1_chrX_+_117526665 AL834210	-251862	+	TSC_hg19_v1_chrX_+_117480490 AM393332 AM393787 EU831942 EU832037 AK304432	-298087	+	TSC_hg19_v1_chrX_+_117861562 BC015768 NM_001560 Y10659 U81379 U81380 AK313467 Y09328 BC009960 AB528371 DQ893454 DQ896296 AB209849	83018	+	TSC_hg19_v1_chrX_+_117957786 AK122676 BC036572 BC031241 BC057841 NM_173798 BC018066	179273	+	TSC_hg19_v1_chrX_+_118108580 AK091777 AK290198 AX747177	330031	+	AY692226|DOCK11|139818|dedicator of cytokinesis 11##NM_144658|DOCK11|139818|dedicator of cytokinesis 11##AL834210|WDR44|54521|WD repeat domain 44##AM393332|WDR44|54521|WD repeat domain 44##AM393787|WDR44|54521|WD repeat domain 44##EU831942|WDR44|54521|WD repeat domain 44##EU832037|WDR44|54521|WD repeat domain 44##AK304432|WDR44|54521|WD repeat domain 44##BC015768|IL13RA1|3597|interleukin 13 receptor, alpha 1##NM_001560|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y10659|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81379|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81380|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK313467|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y09328|IL13RA1|3597|interleukin 13 receptor, alpha 1##BC009960|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ893454|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ896296|IL13RA1|3597|interleukin 13 receptor, alpha 1##AB209849|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK122676|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC036572|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC031241|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC057841|ZCCHC12|170261|zinc finger, CCHC domain containing 12##NM_173798|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC018066|ZCCHC12|170261|zinc finger, CCHC domain containing 12##AK091777|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK290198|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3	0.993086	CTCF.p2:-17:0.993
chr1	196797121	196797230	reg1022874.p2	6.279	+	NM_002113 BC107771 AK311681 AK290830 BC016755 M65292 M65293 X56210 AB590260 DQ892762 DQ896007 X56209	-8254	+	BC029390 NM_001166624 NM_021023 BC070259 AK298459 BC020680 BC020687 BC058009 X68679 CU676644 CU687072 CU691286	-53203	+	NM_000186 NM_001014975 TSC_hg19_v1_chr1_+_196621172 AK291395 AK225649 X07523 Y00716 BC037285 BC012610 BC110643 BC073982 BC142699 CU691466	-176048	+	AK292752 NM_001201550 NM_001201551 NM_006684 X98337 AJ640130 BC074957	60012	+	BC022283 NM_005666 X64877 AX772812 CU692532 DQ891405 DQ894582	115784	+	AK314026 NM_030787 BC026282 AF295327 BC111773 AB590626	149554	+	NM_002113|CFHR1|3078|complement factor H-related 1##BC107771|CFHR1|3078|complement factor H-related 1##AK290830|CFHR1|3078|complement factor H-related 1##BC016755|CFHR1|3078|complement factor H-related 1##M65292|CFHR1|3078|complement factor H-related 1##M65293|CFHR1|3078|complement factor H-related 1##X56210|CFHR1|3078|complement factor H-related 1##DQ892762|CFHR1|3078|complement factor H-related 1##DQ896007|CFHR1|3078|complement factor H-related 1##X56209|CFHR1|3078|complement factor H-related 1##NM_001166624|CFHR3|10878|complement factor H-related 3##NM_021023|CFHR3|10878|complement factor H-related 3##BC070259|CFHR3|10878|complement factor H-related 3##AK298459|CFHR3|10878|complement factor H-related 3##BC020680|CFHR3|10878|complement factor H-related 3##BC020687|CFHR3|10878|complement factor H-related 3##BC058009|CFHR3|10878|complement factor H-related 3##X68679|CFHR3|10878|complement factor H-related 3##NM_000186|CFH|3075|complement factor H##NM_001014975|CFH|3075|complement factor H##AK291395|CFH|3075|complement factor H##AK225649|CFH|3075|complement factor H##X07523|CFH|3075|complement factor H##Y00716|CFH|3075|complement factor H##BC037285|CFH|3075|complement factor H##BC012610|CFH|3075|complement factor H##BC110643|CFH|3075|complement factor H##BC073982|CFH|3075|complement factor H##BC142699|CFH|3075|complement factor H##AK292752|CFHR4|10877|complement factor H-related 4##NM_001201550|CFHR4|10877|complement factor H-related 4##NM_001201551|CFHR4|10877|complement factor H-related 4##NM_006684|CFHR4|10877|complement factor H-related 4##X98337|CFHR4|10877|complement factor H-related 4##AJ640130|CFHR4|10877|complement factor H-related 4##BC074957|CFHR4|10877|complement factor H-related 4##BC022283|CFHR2|3080|complement factor H-related 2##NM_005666|CFHR2|3080|complement factor H-related 2##X64877|CFHR2|3080|complement factor H-related 2##DQ891405|CFHR2|3080|complement factor H-related 2##DQ894582|CFHR2|3080|complement factor H-related 2##AK314026|CFHR5|81494|complement factor H-related 5##NM_030787|CFHR5|81494|complement factor H-related 5##BC026282|CFHR5|81494|complement factor H-related 5##AF295327|CFHR5|81494|complement factor H-related 5##BC111773|CFHR5|81494|complement factor H-related 5	0.958849	CTCF.p2:-5:0.959
chrX	52603804	52603924	reg1019351.p1	6.279	+	AJ318878 AJ290447 AJ318879 NM_001097593 NM_001097596 NM_001097598 NM_001097605 NM_133430 AF251237 NM_001097592 NM_001097594 NM_001097597 NM_001097604 NM_020411	-57773	-	AJ318878 AJ290447 AJ318879 NM_001097593 NM_001097596 NM_001097598 NM_001097605 NM_133430 AF251237 NM_001097592 NM_001097594 NM_001097597 NM_001097604 NM_020411	-70667	-	NM_001097592 NM_001097594 NM_001097597 NM_001097604 NM_020411 AF251237 NM_001097593 NM_001097596 NM_001097598 NM_001097605 NM_133430 AJ290447 AJ318879 AJ318878	-92000	+	NM_173358	80085	-	BC002818 BC007343 BC016957 BC071827 X86175 Z49105 NM_001164417 NM_003147 NM_175698 BC103863	132379	-	BC103863 NM_001164417 NM_003147 NM_175698 Z49105 X86175 BC002818 BC007343 BC016957 BC071827	176448	+	AJ318878|XAGE1D|9503|X antigen family, member 1D##AJ290447|XAGE1D|9503|X antigen family, member 1D##AJ318879|XAGE1D|9503|X antigen family, member 1D##NM_001097593|XAGE1A|653219|X antigen family, member 1A##NM_001097596|XAGE1B|653220|X antigen family, member 1B##NM_001097598|XAGE1C|653048|X antigen family, member 1C##NM_001097605|XAGE1E|653067|X antigen family, member 1E##NM_133430|XAGE1D|9503|X antigen family, member 1D##AF251237|XAGE1D|9503|X antigen family, member 1D##NM_001097592|XAGE1A|653219|X antigen family, member 1A##NM_001097594|XAGE1B|653220|X antigen family, member 1B##NM_001097597|XAGE1C|653048|X antigen family, member 1C##NM_001097604|XAGE1E|653067|X antigen family, member 1E##NM_020411|XAGE1D|9503|X antigen family, member 1D##AJ318878|XAGE1D|9503|X antigen family, member 1D##AJ290447|XAGE1D|9503|X antigen family, member 1D##AJ318879|XAGE1D|9503|X antigen family, member 1D##NM_001097593|XAGE1A|653219|X antigen family, member 1A##NM_001097596|XAGE1B|653220|X antigen family, member 1B##NM_001097598|XAGE1C|653048|X antigen family, member 1C##NM_001097605|XAGE1E|653067|X antigen family, member 1E##NM_133430|XAGE1D|9503|X antigen family, member 1D##AF251237|XAGE1D|9503|X antigen family, member 1D##NM_001097592|XAGE1A|653219|X antigen family, member 1A##NM_001097594|XAGE1B|653220|X antigen family, member 1B##NM_001097597|XAGE1C|653048|X antigen family, member 1C##NM_001097604|XAGE1E|653067|X antigen family, member 1E##NM_020411|XAGE1D|9503|X antigen family, member 1D##NM_001097592|XAGE1A|653219|X antigen family, member 1A##NM_001097594|XAGE1B|653220|X antigen family, member 1B##NM_001097597|XAGE1C|653048|X antigen family, member 1C##NM_001097604|XAGE1E|653067|X antigen family, member 1E##NM_020411|XAGE1D|9503|X antigen family, member 1D##AF251237|XAGE1D|9503|X antigen family, member 1D##NM_001097593|XAGE1A|653219|X antigen family, member 1A##NM_001097596|XAGE1B|653220|X antigen family, member 1B##NM_001097598|XAGE1C|653048|X antigen family, member 1C##NM_001097605|XAGE1E|653067|X antigen family, member 1E##NM_133430|XAGE1D|9503|X antigen family, member 1D##AJ290447|XAGE1D|9503|X antigen family, member 1D##AJ318879|XAGE1D|9503|X antigen family, member 1D##AJ318878|XAGE1D|9503|X antigen family, member 1D##NM_173358|SSX7|280658|synovial sarcoma, X breakpoint 7##BC002818|SSX2|6757|synovial sarcoma, X breakpoint 2##BC007343|SSX2|6757|synovial sarcoma, X breakpoint 2##BC016957|SSX2|6757|synovial sarcoma, X breakpoint 2##BC071827|SSX2|6757|synovial sarcoma, X breakpoint 2##X86175|SSX2|6757|synovial sarcoma, X breakpoint 2##Z49105|SSX2|6757|synovial sarcoma, X breakpoint 2##NM_001164417|SSX2B|727837|synovial sarcoma, X breakpoint 2B##NM_003147|SSX2|6757|synovial sarcoma, X breakpoint 2##NM_175698|SSX2|6757|synovial sarcoma, X breakpoint 2##BC103863|SSX2|6757|synovial sarcoma, X breakpoint 2##BC103863|SSX2|6757|synovial sarcoma, X breakpoint 2##NM_001164417|SSX2B|727837|synovial sarcoma, X breakpoint 2B##NM_003147|SSX2|6757|synovial sarcoma, X breakpoint 2##NM_175698|SSX2|6757|synovial sarcoma, X breakpoint 2##Z49105|SSX2|6757|synovial sarcoma, X breakpoint 2##X86175|SSX2|6757|synovial sarcoma, X breakpoint 2##BC002818|SSX2|6757|synovial sarcoma, X breakpoint 2##BC007343|SSX2|6757|synovial sarcoma, X breakpoint 2##BC016957|SSX2|6757|synovial sarcoma, X breakpoint 2##BC071827|SSX2|6757|synovial sarcoma, X breakpoint 2	0.570145	CTCF.p2:6:0.570
chr11	84269272	84269398	reg1022466.p2	6.278	+	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	-240954	-	AK294375 AK126776 AK295624 NM_001142700	-285059	-	AK299778 CR933674 NM_001142702	-875884	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	364897	-	U32376 AB209252 AK295094 NM_001364	365115	-	CR749820 NM_001142699	1068978	-	AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)##U32376|DLG2|1740|discs, large homolog 2 (Drosophila)##AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)##CR749820|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142699|DLG2|1740|discs, large homolog 2 (Drosophila)	0.936621	CTCF.p2:-10:0.937
chr16	88850703	88850814	reg1020791.p1	6.278	+	TSC_hg19_v1_chr16_+_88772910 BC121805 BC125269 NM_001012759 NM_001012762 BC157881 AK299521 BC108659 BC021056 BC063512 BC080540	-77835	+	TSC_hg19_v1_chr16_-_88772809 NM_178841	-77936	-	CU680704 HQ258016 TSC_hg19_v1_chr16_-_88772797 BC013948 AK290920 BC017226 NM_001171815	-77990	-	NM_001142864 AB384448 TSC_hg19_v1_chr16_-_88851456	660	-	AB053172 NM_030928 TSC_hg19_v1_chr16_+_88870207	19439	+	TSC_hg19_v1_chr16_+_88870215 AF321125 BC000137 BC009410 BC008860 BC008676	19522	+	BC121805|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC125269|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_001012759|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_001012762|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC157881|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##AK299521|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC108659|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC021056|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC063512|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC080540|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_178841|RNF166|115992|ring finger protein 166##HQ258016|RNF166|115992|ring finger protein 166##BC013948|RNF166|115992|ring finger protein 166##AK290920|RNF166|115992|ring finger protein 166##BC017226|RNF166|115992|ring finger protein 166##NM_001171815|RNF166|115992|ring finger protein 166##NM_001142864|PIEZO1|9780|piezo-type mechanosensitive ion channel component 1##AB384448|PIEZO1|9780|piezo-type mechanosensitive ion channel component 1##AB053172|CDT1|81620|chromatin licensing and DNA replication factor 1##NM_030928|CDT1|81620|chromatin licensing and DNA replication factor 1##AF321125|CDT1|81620|chromatin licensing and DNA replication factor 1##BC000137|CDT1|81620|chromatin licensing and DNA replication factor 1##BC009410|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008860|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008676|CDT1|81620|chromatin licensing and DNA replication factor 1	0.136039	
chr4	16207316	16207455	reg1025657.p1	6.278	+	TSC_hg19_v1_chr4_-_16085669 AK027422 AK314529	-121715	-	NM_001145847 AK075411 BC012089 NM_001145848 TSC_hg19_v1_chr4_-_16085647 AK027420 AK226033	-121761	-	TSC_hg19_v1_chr4_-_16085325 AF117225	-122054	-	AF189251 TSC_hg19_v1_chr4_-_16228095 AK074494 AK296104	20698	-	TSC_hg19_v1_chr4_-_16228103 BC066899 NM_153365	20752	-	TSC_hg19_v1_chr4_+_16228285 AK096972 BC132927	20910	+	AK027422|PROM1|8842|prominin 1##AK314529|PROM1|8842|prominin 1##NM_001145847|PROM1|8842|prominin 1##AK075411|PROM1|8842|prominin 1##BC012089|PROM1|8842|prominin 1##NM_001145848|PROM1|8842|prominin 1##AK027420|PROM1|8842|prominin 1##AK226033|PROM1|8842|prominin 1##AF117225|PROM1|8842|prominin 1##AF189251|TAPT1|202018|transmembrane anterior posterior transformation 1##AK074494|TAPT1|202018|transmembrane anterior posterior transformation 1##AK296104|TAPT1|202018|transmembrane anterior posterior transformation 1##BC066899|TAPT1|202018|transmembrane anterior posterior transformation 1##NM_153365|TAPT1|202018|transmembrane anterior posterior transformation 1##AK096972|FLJ39653|202020|uncharacterized FLJ39653##BC132927|FLJ39653|202020|uncharacterized FLJ39653	0.0	
chr8	98656436	98656534	reg1021333.p1	6.278	+	TSC_hg19_v1_chr8_+_98656437 BC014977 AF501310	-26	+	TSC_hg19_v1_chr8_+_98656416 BC045642 NM_178812 BC001815	-108	+	TSC_hg19_v1_chr8_-_98290193 AK091445 AX746987	-366266	-	BC022825 TSC_hg19_v1_chr8_+_98656510 BC009324 AF411226 AY082966 AY974040	128	+	AK308030 TSC_hg19_v1_chr8_+_98703378	46893	+	AY057051 AY261384 NM_018407 AF527412 TSC_hg19_v1_chr8_+_98787993	131416	+	BC014977|MTDH|92140|metadherin##AF501310|MTDH|92140|metadherin##BC045642|MTDH|92140|metadherin##NM_178812|MTDH|92140|metadherin##BC001815|MTDH|92140|metadherin##AK091445|TSPYL5|85453|TSPY-like 5##BC022825|MTDH|92140|metadherin##BC009324|MTDH|92140|metadherin##AF411226|MTDH|92140|metadherin##AY082966|MTDH|92140|metadherin##AY974040|MTDH|92140|metadherin##AK308030|MTDH|92140|metadherin##AY057051|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AY261384|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##NM_018407|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF527412|LAPTM4B|55353|lysosomal protein transmembrane 4 beta	0.0	
chr11	75236900	75237059	reg1023535.p2	6.277	+	AF318377 TSC_hg19_v1_chr11_-_75236890	-101	-	BC090053 AF318351 NM_030792	-471	-	TSC_hg19_v1_chr11_-_75141540 NM_001039548	-95384	-	NM_001207014 NM_001235 TSC_hg19_v1_chr11_+_75273168 AK290124	36156	+	TSC_hg19_v1_chr11_+_75273296 AK297811 AK130870 AK309905 BC070087 BC014623 D83174 AY264853 BC036298 AK122936	36350	+	TSC_hg19_v1_chr11_-_75379154 BC063860 BC041411	142176	-	AF318377|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##NM_001039548|KLHL35|283212|kelch-like 35 (Drosophila)##NM_001207014|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##NM_001235|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK290124|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK297811|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK130870|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK309905|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC070087|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC014623|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##D83174|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AY264853|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC036298|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK122936|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##BC063860|MAP6|4135|microtubule-associated protein 6##BC041411|MAP6|4135|microtubule-associated protein 6	0.023099	
chr16	89682118	89682220	reg1020026.p1	6.277	+	AK309577 TSC_hg19_v1_chr16_+_89680058	-2161	+	NM_001128141	-2454	+	TSC_hg19_v1_chr16_+_89642221 AJ133798 NM_014427 NM_153636 BC064577 BC035334 CU690070 AB463543	-39962	+	J05257 NM_004413	4830	+	TSC_hg19_v1_chr16_+_89696677 BC017023	14516	+	D13138 DQ890714 EU832130 EU832223 AB590480 BT006664 CR457404 TSC_hg19_v1_chr16_+_89696823	14630	+	AK309577|DPEP1|1800|dipeptidase 1 (renal)##NM_001128141|DPEP1|1800|dipeptidase 1 (renal)##AJ133798|CPNE7|27132|copine VII##NM_014427|CPNE7|27132|copine VII##NM_153636|CPNE7|27132|copine VII##BC064577|CPNE7|27132|copine VII##BC035334|CPNE7|27132|copine VII##J05257|DPEP1|1800|dipeptidase 1 (renal)##NM_004413|DPEP1|1800|dipeptidase 1 (renal)##BC017023|DPEP1|1800|dipeptidase 1 (renal)##D13138|DPEP1|1800|dipeptidase 1 (renal)##DQ890714|DPEP1|1800|dipeptidase 1 (renal)##EU832130|DPEP1|1800|dipeptidase 1 (renal)##EU832223|DPEP1|1800|dipeptidase 1 (renal)##BT006664|DPEP1|1800|dipeptidase 1 (renal)##CR457404|DPEP1|1800|dipeptidase 1 (renal)	0.999829	CTCF.p2:-8:1.000
chr5	78496531	78496640	reg1023343.p1	6.277	+	NM_001713 AK298308 AK303780 AK315224 BC012616 U50929 AB590690	-88930	+	AF257473 TSC_hg19_v1_chr5_+_78365591 AK298298 AK315520 BC020665 DQ891370 DQ894550 AB590411 CU676622	-130992	+	NM_001178005 NM_017614 TSC_hg19_v1_chr5_+_78365558	-131031	+	TSC_hg19_v1_chr5_+_78531933 NM_152405	35306	+	TSC_hg19_v1_chr5_+_78532339 AB590691	35819	+	BC047438 NM_004272	313093	-	NM_001713|BHMT|635|betaine--homocysteine S-methyltransferase##AK298308|BHMT|635|betaine--homocysteine S-methyltransferase##AK303780|BHMT|635|betaine--homocysteine S-methyltransferase##AK315224|BHMT|635|betaine--homocysteine S-methyltransferase##BC012616|BHMT|635|betaine--homocysteine S-methyltransferase##U50929|BHMT|635|betaine--homocysteine S-methyltransferase##AF257473|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK298298|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK315520|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##BC020665|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ891370|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ894550|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_001178005|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_017614|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor##BC047438|HOMER1|9456|homer homolog 1 (Drosophila)##NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)	0.682741	CTCF.p2:2:0.683
chr1	110659190	110659301	reg1024078.p1	6.276	+	AK098556 NM_203412 BC058929	-4170	+	AF008203 BC112007 BC113428 NM_006492	-45968	-	AK291059 TSC_hg19_v1_chr1_+_110577249 AL834196 AB051548 AB463038	-81992	+	NM_001010898 AK289982 TSC_hg19_v1_chr1_+_110693135	33889	+	TSC_hg19_v1_chr1_+_110753347 NM_001039574 NM_004978	94099	+	AK310193 M64676 TSC_hg19_v1_chr1_+_110754079 BC101769	94752	+	AK098556|UBL4B|164153|ubiquitin-like 4B##NM_203412|UBL4B|164153|ubiquitin-like 4B##BC058929|UBL4B|164153|ubiquitin-like 4B##AF008203|ALX3|257|ALX homeobox 3##BC112007|ALX3|257|ALX homeobox 3##BC113428|ALX3|257|ALX homeobox 3##NM_006492|ALX3|257|ALX homeobox 3##AK291059|FAM40A|85369|family with sequence similarity 40, member A##AL834196|FAM40A|85369|family with sequence similarity 40, member A##AB051548|FAM40A|85369|family with sequence similarity 40, member A##NM_001010898|SLC6A17|388662|solute carrier family 6, member 17##AK289982|SLC6A17|388662|solute carrier family 6, member 17##NM_001039574|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_004978|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##AK310193|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##M64676|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##BC101769|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4	0.957386	CTCF.p2:4:0.957
chr2	134537820	134537951	reg1025951.p1	6.276	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-211847	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-358531	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-998191	-	NM_002410 D17716 AF113921	474000	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	938671	-	AK125008 NM_138326 BC016018 BC107420 AB071418	1058333	+	AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	0.070881	
chr4	92034408	92034566	reg1022378.p1	6.276	+	BC051694 NM_207491	-878306	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-985769	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-1218425	+	AB209318 NM_001510 AK308611	1191105	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	2715574	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	3094324	+	BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.988229	CTCF.p2:-23:0.988
chr8	118342485	118342602	reg1022916.p1	6.276	+	NM_001172814 NM_173851	-195207	+	AK298294 NM_001172813 NM_001172815 AL713790	-379340	+	EF560713 NM_001172811	-380032	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	190415	+	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	190499	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	781418	-	NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##EF560713|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172811|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_080651|MED30|90390|mediator complex subunit 30##BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1	0.312502	CTCF.p2:9:0.313
chr1	15058525	15058645	reg1023290.p1	6.275	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	-133391	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-982644	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-982662	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	192134	+	AY505121 NM_001018001	197710	+	AY505122 NM_001017999	213829	+	AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein	0.014949	
chr16	32050356	32050537	reg1023070.p1	6.275	+	TSC_hg19_v1_chr16_+_31885159 BC036367 BC127088 BC127089 AK292573	-165242	+	AF220492 TSC_hg19_v1_chr16_+_31885131	-165314	+	TSC_hg19_v1_chr16_+_31885114 AK096390	-165330	+	TSC_hg19_v1_chr16_-_32199418 AK300387	148973	-	AB023508 AB023509 BC096700 BC099842 NM_001243722 AK312220 CR541650	214212	+	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	636987	-	BC036367|ZNF267|10308|zinc finger protein 267##BC127088|ZNF267|10308|zinc finger protein 267##BC127089|ZNF267|10308|zinc finger protein 267##AK292573|ZNF267|10308|zinc finger protein 267##AF220492|ZNF267|10308|zinc finger protein 267##AK096390|ZNF267|10308|zinc finger protein 267##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AB023508|TP53TG3|24150|TP53 target 3##AB023509|TP53TG3|24150|TP53 target 3##BC096700|TP53TG3|24150|TP53 target 3##BC099842|TP53TG3|24150|TP53 target 3##NM_001243722|LOC729264|729264|TP53-target gene 3 protein-like##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3	4.583972	CTCF.p2:-40:0.496	CTCF.p2:43:0.999	CTCF.p2:-60:0.971	CTCF.p2:87:0.999	CTCF.p2:-99:0.969
chr17	17897728	17897829	reg1020253.p1	6.275	+	NM_001130090 NM_001130091 NM_001130092 NM_031294 TSC_hg19_v1_chr17_+_17876186 BC047873 AL136926 AK293011 BC040276 BC050419 BC050665 AK093317 AX748051	-21578	+	TSC_hg19_v1_chr17_-_17875715 AK124331 AK295111 AK301944 AK303305 AK299872 AF467441 BC051650 AK294846 NM_001033551 NM_001082968	-22037	-	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	-157454	-	AM393241 CU678578 CU689282 AB528073 AF070584 BC032126 AF052185 AY203943 TSC_hg19_v1_chr17_-_17942481 BC004114 NM_145691 AK290257 AK294487 AK296382	44625	-	TSC_hg19_v1_chr17_+_17942750 BC041829 NM_024052 AK315083 AK074284 AK127580 BC000636	45029	+	TSC_hg19_v1_chr17_+_17991289 AK313362 BC062572 BC000493 NM_001388 AK297569 X80754 AK295575 DQ890768 DQ893929 BT006976	93490	+	NM_001130090|LRRC48|83450|leucine rich repeat containing 48##NM_001130091|LRRC48|83450|leucine rich repeat containing 48##NM_001130092|LRRC48|83450|leucine rich repeat containing 48##NM_031294|LRRC48|83450|leucine rich repeat containing 48##BC047873|LRRC48|83450|leucine rich repeat containing 48##AL136926|LRRC48|83450|leucine rich repeat containing 48##AK293011|LRRC48|83450|leucine rich repeat containing 48##BC040276|LRRC48|83450|leucine rich repeat containing 48##BC050419|LRRC48|83450|leucine rich repeat containing 48##BC050665|LRRC48|83450|leucine rich repeat containing 48##AK093317|LRRC48|83450|leucine rich repeat containing 48##AK124331|TOM1L2|146691|target of myb1-like 2 (chicken)##AK295111|TOM1L2|146691|target of myb1-like 2 (chicken)##AK301944|TOM1L2|146691|target of myb1-like 2 (chicken)##AK303305|TOM1L2|146691|target of myb1-like 2 (chicken)##AK299872|TOM1L2|146691|target of myb1-like 2 (chicken)##AF467441|TOM1L2|146691|target of myb1-like 2 (chicken)##BC051650|TOM1L2|146691|target of myb1-like 2 (chicken)##AK294846|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001033551|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001082968|TOM1L2|146691|target of myb1-like 2 (chicken)##BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1##AM393241|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF070584|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC032126|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF052185|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AY203943|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC004114|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_145691|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK290257|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK294487|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC041829|C17orf39|79018|chromosome 17 open reading frame 39##NM_024052|C17orf39|79018|chromosome 17 open reading frame 39##AK315083|C17orf39|79018|chromosome 17 open reading frame 39##AK074284|C17orf39|79018|chromosome 17 open reading frame 39##AK127580|C17orf39|79018|chromosome 17 open reading frame 39##BC000636|C17orf39|79018|chromosome 17 open reading frame 39##AK313362|DRG2|1819|developmentally regulated GTP binding protein 2##BC062572|DRG2|1819|developmentally regulated GTP binding protein 2##BC000493|DRG2|1819|developmentally regulated GTP binding protein 2##NM_001388|DRG2|1819|developmentally regulated GTP binding protein 2##AK297569|DRG2|1819|developmentally regulated GTP binding protein 2##X80754|DRG2|1819|developmentally regulated GTP binding protein 2##AK295575|DRG2|1819|developmentally regulated GTP binding protein 2##DQ890768|DRG2|1819|developmentally regulated GTP binding protein 2##DQ893929|DRG2|1819|developmentally regulated GTP binding protein 2##BT006976|DRG2|1819|developmentally regulated GTP binding protein 2	0.998413	CTCF.p2:3:0.998
chr2	113482269	113482402	reg1004628.p1	6.275	+	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	-78815	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-140146	+	TSC_hg19_v1_chr2_+_113342023 AK024631 BC004498 NM_032309 AK312219	-140297	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	39887	-	NM_000575 BC035169	60637	-	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	112009	-	NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BC004498|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_032309|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK312219|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta	0.027561	
chr5	11182939	11183052	reg1020313.p2	6.275	+	TSC_hg19_v1_chr5_-_10761361 NM_004394	-421596	-	TSC_hg19_v1_chr5_-_10761341 BC002726	-421653	-	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	-421736	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	721041	-	TSC_hg19_v1_chr5_-_11904184 AK296232	721189	-	AX800026 AY045575 NM_001369	2761593	-	NM_004394|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5	0.893271	CTCF.p2:19:0.893
chr6	37282772	37282915	reg1027990.p1	6.275	+	TSC_hg19_v1_chr6_+_37252169 BC063523	-30653	+	TSC_hg19_v1_chr6_-_37225916 BC009625 NM_001162900	-56916	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	-57244	+	TSC_hg19_v1_chr6_+_37321758 NM_003958 NM_183078	38915	+	TSC_hg19_v1_chr6_+_37321801 BC007517	38965	+	TSC_hg19_v1_chr6_+_37321829 AB014546 AK222765 AK298319 AK022075 AK308840 AF334675 BT007446 CU675685 DQ890737 DQ893909	39038	+	BC063523|TBC1D22B|55633|TBC1 domain family, member 22B##BC009625|TMEM217|221468|transmembrane protein 217##NM_001162900|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B##NM_003958|RNF8|9025|ring finger protein 8##NM_183078|RNF8|9025|ring finger protein 8##BC007517|RNF8|9025|ring finger protein 8##AB014546|RNF8|9025|ring finger protein 8##AK222765|RNF8|9025|ring finger protein 8##AK298319|RNF8|9025|ring finger protein 8##AK022075|RNF8|9025|ring finger protein 8##AK308840|RNF8|9025|ring finger protein 8##AF334675|RNF8|9025|ring finger protein 8##BT007446|RNF8|9025|ring finger protein 8##DQ890737|RNF8|9025|ring finger protein 8##DQ893909|RNF8|9025|ring finger protein 8	0.993613	CTCF.p2:-5:0.994
chr8	145002752	145002932	reg1019349.p2	6.275	+	AB051895 NM_031308	-55409	-	TSC_hg19_v1_chr8_-_144923180 BC071605 AK293943 NM_178564	-79683	-	TSC_hg19_v1_chr8_-_144911540 AF114818 AK292373 NM_014281 NM_078480	-91292	-	AF330791 TSC_hg19_v1_chr8_-_145013766 AY480051 NM_201384	10861	-	AY480050 NM_201383 TSC_hg19_v1_chr8_-_145016793	13919	-	AF330792 AY480049 TSC_hg19_v1_chr8_-_145018117 NM_201382	15262	-	AB051895|EPPK1|83481|epiplakin 1##NM_031308|EPPK1|83481|epiplakin 1##BC071605|NRBP2|340371|nuclear receptor binding protein 2##AK293943|NRBP2|340371|nuclear receptor binding protein 2##NM_178564|NRBP2|340371|nuclear receptor binding protein 2##AF114818|PUF60|22827|poly-U binding splicing factor 60KDa##AK292373|PUF60|22827|poly-U binding splicing factor 60KDa##NM_014281|PUF60|22827|poly-U binding splicing factor 60KDa##NM_078480|PUF60|22827|poly-U binding splicing factor 60KDa##AY480051|PLEC|5339|plectin##NM_201384|PLEC|5339|plectin##AY480050|PLEC|5339|plectin##NM_201383|PLEC|5339|plectin##AF330792|PLEC|5339|plectin##AY480049|PLEC|5339|plectin##NM_201382|PLEC|5339|plectin	0.0	
chr8	42928800	42928904	reg1019970.p1	6.275	+	TSC_hg19_v1_chr8_+_42911465 NM_002027 BC037295 AK292121 L00634 BC084566 L10413 AB590505 BT009854 BC017029	-17384	+	TSC_hg19_v1_chr8_+_42752142 BC056146	-176706	+	TSC_hg19_v1_chr8_+_42752090 AK309224	-176764	+	TSC_hg19_v1_chr8_+_42948657 NM_032237	19801	+	AK027009 TSC_hg19_v1_chr8_+_42948660	19815	+	TSC_hg19_v1_chr8_+_42995606 NM_152419	66728	+	NM_002027|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC037295|FNTA|2339|farnesyltransferase, CAAX box, alpha##AK292121|FNTA|2339|farnesyltransferase, CAAX box, alpha##L00634|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC084566|FNTA|2339|farnesyltransferase, CAAX box, alpha##L10413|FNTA|2339|farnesyltransferase, CAAX box, alpha##BT009854|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC017029|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC056146|HOOK3|84376|hook homolog 3 (Drosophila)##AK309224|HOOK3|84376|hook homolog 3 (Drosophila)##NM_032237|SGK196|84197|protein kinase-like protein SgK196##NM_152419|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase	0.842717	CTCF.p2:10:0.843
chrX	105414460	105414570	reg1022793.p2	6.275	+	BC031229 NM_001171020 NM_152423	-2218	+	TSC_hg19_v1_chrX_-_105282719 AK310778 NM_000354	-131786	-	TSC_hg19_v1_chrX_+_105066559 AK131549	-347949	+	NM_001184782 NM_018015 TSC_hg19_v1_chrX_+_105855208 BC047503 AK001040 BC070110 AK291730 BC011483 BC033709 BC054032 CU687040 CU689708	440719	+	BC036901 NM_024539 AK126553	522560	+	TSC_hg19_v1_chrX_+_105969932 AK074264 NM_194463 BC063404 AF394689 CU687692	555493	+	BC031229|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_001171020|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_152423|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##AK131549|NRK|203447|Nik related kinase##NM_001184782|CXorf57|55086|chromosome X open reading frame 57##NM_018015|CXorf57|55086|chromosome X open reading frame 57##BC047503|CXorf57|55086|chromosome X open reading frame 57##AK001040|CXorf57|55086|chromosome X open reading frame 57##BC070110|CXorf57|55086|chromosome X open reading frame 57##AK291730|CXorf57|55086|chromosome X open reading frame 57##BC011483|CXorf57|55086|chromosome X open reading frame 57##BC033709|CXorf57|55086|chromosome X open reading frame 57##BC054032|CXorf57|55086|chromosome X open reading frame 57##BC036901|RNF128|79589|ring finger protein 128##NM_024539|RNF128|79589|ring finger protein 128##AK126553|RNF128|79589|ring finger protein 128##AK074264|RNF128|79589|ring finger protein 128##NM_194463|RNF128|79589|ring finger protein 128##BC063404|RNF128|79589|ring finger protein 128##AF394689|RNF128|79589|ring finger protein 128	0.298006	CTCF.p2:-3:0.298
chr1	1875558	1875678	reg1021325.p1	6.274	+	AB528804 GQ129259 GQ129260 TSC_hg19_v1_chr1_-_1850719 NM_178545	-24897	-	AF490905 AY566229 NM_138705	-29353	+	TSC_hg19_v1_chr1_-_1822565 AK122949	-53050	-	AK127388 NM_001080484	59657	-	TSC_hg19_v1_chr1_+_1950794 NM_000815 AK290861 BC033801 AB385062 DQ892050 AF016917	75185	+	TSC_hg19_v1_chr1_+_1981920 BC014270 NM_002744 BC008058 AB464093 DQ892929 DQ893922 DQ896178 CU675909 AK290995 BT007082 L14283 Z15108	106376	+	GQ129259|TMEM52|339456|transmembrane protein 52##GQ129260|TMEM52|339456|transmembrane protein 52##NM_178545|TMEM52|339456|transmembrane protein 52##AF490905|CALML6|163688|calmodulin-like 6##AY566229|CALML6|163688|calmodulin-like 6##NM_138705|CALML6|163688|calmodulin-like 6##AK122949|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##AK127388|KIAA1751|85452|KIAA1751##NM_001080484|KIAA1751|85452|KIAA1751##NM_000815|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##AK290861|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##BC033801|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##DQ892050|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##AF016917|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##BC014270|PRKCZ|5590|protein kinase C, zeta##NM_002744|PRKCZ|5590|protein kinase C, zeta##BC008058|PRKCZ|5590|protein kinase C, zeta##DQ892929|PRKCZ|5590|protein kinase C, zeta##DQ893922|PRKCZ|5590|protein kinase C, zeta##DQ896178|PRKCZ|5590|protein kinase C, zeta##AK290995|PRKCZ|5590|protein kinase C, zeta##BT007082|PRKCZ|5590|protein kinase C, zeta##L14283|PRKCZ|5590|protein kinase C, zeta##Z15108|PRKCZ|5590|protein kinase C, zeta	0.402158	CTCF.p2:-9:0.325
chr16	82772442	82772555	reg1023094.p2	6.274	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-111829	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	-111909	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	-112104	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	1069102	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	1069158	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	1160271	+	AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase	0.19025	
chr5	167913344	167913458	reg1020963.p1	6.274	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	-194580	+	HE578282 HE578283 NM_001122679	-1201559	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-4980758	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	73	+	TSC_hg19_v1_chr5_+_167956546 AX721195	43216	+	TSC_hg19_v1_chr5_-_168006352 AK223285 AK022961	92950	-	NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase##AK223285|PANK3|79646|pantothenate kinase 3##AK022961|PANK3|79646|pantothenate kinase 3	0.310306	CTCF.p2:-19:0.310
chrX	24770639	24770811	reg1022387.p1	6.274	+	NM_016937 X06745 TSC_hg19_v1_chrX_+_24712066	-58660	+	TSC_hg19_v1_chrX_+_24712045 BX648513	-58675	+	TSC_hg19_v1_chrX_-_24690740 BC045634 AK296333 AK226121 NM_001163264	-79866	-	BC169334 TSC_hg19_v1_chrX_-_25031209	260468	-	NM_139058 TSC_hg19_v1_chrX_-_25034074	263348	-	NM_173699 BC029525 AK057361	1385761	+	NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##BX648513|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##BC169334|ARX|170302|aristaless related homeobox##NM_139058|ARX|170302|aristaless related homeobox##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18	0.945941	CTCF.p2:-1:0.946
chr11	74581634	74581806	reg1020197.p2	6.273	+	TSC_hg19_v1_chr11_+_74459915 AB082522 NM_001098638	-121812	+	BC142623 TSC_hg19_v1_chr11_-_74442472	-139267	-	NM_015424 AK304519 AY358522 AY279090 AY279091	-139515	-	TSC_hg19_v1_chr11_-_74660137 AK056364	78404	-	TSC_hg19_v1_chr11_-_74660150 BC064584 BC037294 BC040541	78436	-	TSC_hg19_v1_chr11_-_74660177 NM_182969 CR749605	78484	-	AB082522|RNF169|254225|ring finger protein 169##NM_001098638|RNF169|254225|ring finger protein 169##BC142623|CHRDL2|25884|chordin-like 2##NM_015424|CHRDL2|25884|chordin-like 2##AK304519|CHRDL2|25884|chordin-like 2##AY358522|CHRDL2|25884|chordin-like 2##AY279090|CHRDL2|25884|chordin-like 2##AY279091|CHRDL2|25884|chordin-like 2##AK056364|XRRA1|143570|X-ray radiation resistance associated 1##BC064584|XRRA1|143570|X-ray radiation resistance associated 1##BC037294|XRRA1|143570|X-ray radiation resistance associated 1##BC040541|XRRA1|143570|X-ray radiation resistance associated 1##NM_182969|XRRA1|143570|X-ray radiation resistance associated 1##CR749605|XRRA1|143570|X-ray radiation resistance associated 1	0.939688	CTCF.p2:3:0.940
chr12	13251081	13251211	reg1022406.p1	6.273	+	AK075311 AY358513 BC112896 AK075288 AK075322 AB593019 AB593020 BC001796 AK027894 NM_001206843 NM_001206845 NM_031289 NM_153823	-2486	-	TSC_hg19_v1_chr12_+_13197325 AK125278 NM_020853 BC039267 CR936647 HQ258331 HQ258475	-53818	+	TSC_hg19_v1_chr12_+_13197145 BC132772 BC132774	-53965	+	BC033854 AK058045 NM_001080554 NM_001080555 NM_001206842	5454	-	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	98492	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	98571	+	AK075311|GSG1|83445|germ cell associated 1##AY358513|GSG1|83445|germ cell associated 1##BC112896|GSG1|83445|germ cell associated 1##AK075288|GSG1|83445|germ cell associated 1##AK075322|GSG1|83445|germ cell associated 1##AB593019|GSG1|83445|germ cell associated 1##AB593020|GSG1|83445|germ cell associated 1##BC001796|GSG1|83445|germ cell associated 1##AK027894|GSG1|83445|germ cell associated 1##NM_001206843|GSG1|83445|germ cell associated 1##NM_001206845|GSG1|83445|germ cell associated 1##NM_031289|GSG1|83445|germ cell associated 1##NM_153823|GSG1|83445|germ cell associated 1##AK125278|KIAA1467|57613|KIAA1467##NM_020853|KIAA1467|57613|KIAA1467##BC039267|KIAA1467|57613|KIAA1467##CR936647|KIAA1467|57613|KIAA1467##BC132772|KIAA1467|57613|KIAA1467##BC132774|KIAA1467|57613|KIAA1467##BC033854|GSG1|83445|germ cell associated 1##AK058045|GSG1|83445|germ cell associated 1##NM_001080554|GSG1|83445|germ cell associated 1##NM_001080555|GSG1|83445|germ cell associated 1##NM_001206842|GSG1|83445|germ cell associated 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1	0.023071	
chr16	85286914	85287013	reg1022154.p1	6.273	+	BC093665 BC111944 AK126284 NM_198491	-140909	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-225593	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-241834	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	358058	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	359990	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	435579	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.674972	CTCF.p2:0:0.489
chr11	6689171	6689313	reg1022907.p2	6.272	+	TSC_hg19_v1_chr11_-_6676982 AB053446 NM_003737	-12279	-	TSC_hg19_v1_chr11_-_6643809 BC038382	-45381	-	TSC_hg19_v1_chr11_-_6640661 AK295801 NM_000391	-48566	-	TSC_hg19_v1_chr11_-_6704541 CR457177 DQ891581 DQ894774 DQ895036 AB463889 BC012306 AK026857 AF164797 AF141338 NM_022061	15332	-	NM_001004490 BC140734	100994	-	BC151143 NM_001004489	117005	+	AB053446|DCHS1|8642|dachsous 1 (Drosophila)##NM_003737|DCHS1|8642|dachsous 1 (Drosophila)##BC038382|DCHS1|8642|dachsous 1 (Drosophila)##AK295801|TPP1|1200|tripeptidyl peptidase I##NM_000391|TPP1|1200|tripeptidyl peptidase I##CR457177|MRPL17|63875|mitochondrial ribosomal protein L17##DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17##DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17##DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17##BC012306|MRPL17|63875|mitochondrial ribosomal protein L17##AK026857|MRPL17|63875|mitochondrial ribosomal protein L17##AF164797|MRPL17|63875|mitochondrial ribosomal protein L17##AF141338|MRPL17|63875|mitochondrial ribosomal protein L17##NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17##NM_001004490|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC140734|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC151143|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##NM_001004489|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1	0.01043	
chr15	76440408	76440534	reg1020563.p1	6.272	+	TSC_hg19_v1_chr15_+_76352323 AK056777 AK308676	-88142	+	TSC_hg19_v1_chr15_+_76352281 AK095509 NM_152335	-88182	+	AK311204 TSC_hg19_v1_chr15_-_76352131	-88369	-	BT009796 J04058 TSC_hg19_v1_chr15_-_76603737 AB529049 BC095457	163261	-	TSC_hg19_v1_chr15_-_76603771 AK300044 BC015526 D28380	163294	-	TSC_hg19_v1_chr15_-_76603791 BC029995	163326	-	AK308676|C15orf27|123591|chromosome 15 open reading frame 27##AK095509|C15orf27|123591|chromosome 15 open reading frame 27##NM_152335|C15orf27|123591|chromosome 15 open reading frame 27##AK311204|NRG4|145957|neuregulin 4##BT009796|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##J04058|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC095457|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##AK300044|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC015526|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC029995|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide	0.994436	CTCF.p2:-35:0.994
chr6_qbl_hap6	860667	860776	reg1021237.p1	6.272	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.57731	CTCF.p2:16:0.577
chr7	101500268	101500448	reg1019982.p2	6.272	+	M74099 NM_181552	-39477	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-41149	+	BC002778 NM_138403	-227783	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	428039	+	TSC_hg19_v1_chr7_+_101928431 AB000520	428085	+	NM_001146210	496530	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.0	
chr9	2469719	2469870	reg1023312.p1	6.272	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-454498	+	AF130729 NM_181872	-1419185	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-1419424	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	152013	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	152280	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	152318	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.062452	
chr16	21962474	21962597	reg1021329.p1	6.271	+	AK316459 AK296301 AK303500 AK301703 AK294452 TSC_hg19_v1_chr16_-_21854901	-107707	-	BC009198 BC068999 TSC_hg19_v1_chr16_-_21831777 BC070157	-130775	-	AK093062 AX747895 NM_170664 BC040551 AK302733	-246218	+	NM_003366 AK307535 TSC_hg19_v1_chr16_+_21964618	2093	+	TSC_hg19_v1_chr16_+_21964679 J04973 BC003136	2150	+	TSC_hg19_v1_chr16_+_21964701 AB587386 DQ891390 DQ894565	2186	+	AK316459|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296301|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AK303500|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK301703|LOC613037|613037|nuclear pore complex interacting protein pseudogene##AK294452|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BC009198|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC068999|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC070157|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##AK093062|OTOA|146183|otoancorin##NM_170664|OTOA|146183|otoancorin##BC040551|OTOA|146183|otoancorin##AK302733|OTOA|146183|otoancorin##NM_003366|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##AK307535|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##J04973|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##BC003136|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##DQ891390|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##DQ894565|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II	0.998819	CTCF.p2:-11:0.999
chr1	64023203	64023334	reg1023052.p1	6.270	+	AK292220 NM_032437 AK092219 TSC_hg19_v1_chr1_+_63989242 AK315850 AB058702 BC015814	-34129	+	AK309622 AF175306 BC009929 TSC_hg19_v1_chr1_-_63988878 BC014385 AK312944 NM_001206739 NM_014288	-34387	-	AK022700 TSC_hg19_v1_chr1_+_63833329 BC001253 AF102851	-189938	+	TSC_hg19_v1_chr1_+_64059081 AK294186 BC019920 NM_002633 BC001756 BC067763 AK312254 M83088 BC090856 DQ890618 DQ893786 CU676478 BT006961	35757	+	AK293298 NM_001172819 AK298505	36246	+	NM_001172818 AK300100	65625	+	AK292220|EFCAB7|84455|EF-hand calcium binding domain 7##NM_032437|EFCAB7|84455|EF-hand calcium binding domain 7##AK092219|EFCAB7|84455|EF-hand calcium binding domain 7##AK315850|EFCAB7|84455|EF-hand calcium binding domain 7##AB058702|EFCAB7|84455|EF-hand calcium binding domain 7##BC015814|EFCAB7|84455|EF-hand calcium binding domain 7##AK309622|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AF175306|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##BC009929|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##BC014385|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AK312944|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##NM_001206739|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##NM_014288|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AK294186|PGM1|5236|phosphoglucomutase 1##BC019920|PGM1|5236|phosphoglucomutase 1##NM_002633|PGM1|5236|phosphoglucomutase 1##BC001756|PGM1|5236|phosphoglucomutase 1##BC067763|PGM1|5236|phosphoglucomutase 1##AK312254|PGM1|5236|phosphoglucomutase 1##M83088|PGM1|5236|phosphoglucomutase 1##BC090856|PGM1|5236|phosphoglucomutase 1##DQ890618|PGM1|5236|phosphoglucomutase 1##DQ893786|PGM1|5236|phosphoglucomutase 1##BT006961|PGM1|5236|phosphoglucomutase 1##AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1	0.997662	CTCF.p2:-13:0.998
chr1	178279919	178280020	reg1021932.p1	6.269	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-216328	+	TSC_hg19_v1_chr1_+_178063306 BC063442	-216665	+	TSC_hg19_v1_chr1_+_178063275 BC030292	-216694	+	AF047711 NM_004841 AK290308	30665	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	202297	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	414404	+	BC110611|RASAL2|9462|RAS protein activator like 2##BC063442|RASAL2|9462|RAS protein activator like 2##BC030292|RASAL2|9462|RAS protein activator like 2##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	0.999284	CTCF.p2:-5:0.999
chr1	211491665	211491731	reg1040024.p2	6.269	+	TSC_hg19_v1_chr1_+_211433306 NM_018254 AK001738 AB037764 AB463216	-58327	+	BC031608 TSC_hg19_v1_chr1_+_211432894 CU689198	-58820	+	TSC_hg19_v1_chr1_+_211432740 AK300942 AK302664	-58945	+	BC032830 NM_004619	8258	+	NM_001033910 TSC_hg19_v1_chr1_+_211500158	8455	+	TSC_hg19_v1_chr1_+_211500174 AK295766 AK303286 AB000509	8489	+	NM_018254|RCOR3|55758|REST corepressor 3##AK001738|RCOR3|55758|REST corepressor 3##AB037764|RCOR3|55758|REST corepressor 3##BC031608|RCOR3|55758|REST corepressor 3##AK300942|RCOR3|55758|REST corepressor 3##AK302664|RCOR3|55758|REST corepressor 3##BC032830|TRAF5|7188|TNF receptor-associated factor 5##NM_004619|TRAF5|7188|TNF receptor-associated factor 5##NM_001033910|TRAF5|7188|TNF receptor-associated factor 5##AK295766|TRAF5|7188|TNF receptor-associated factor 5##AK303286|TRAF5|7188|TNF receptor-associated factor 5##AB000509|TRAF5|7188|TNF receptor-associated factor 5	0.0	
chr13	29379512	29379623	reg1023011.p1	6.269	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	-86512	-	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	-146273	+	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	-146359	+	BC150245 AB018317 NM_001033602 AB384524	219208	+	BC032481 NM_015233 AK293970 BC119654 BC119655 BC129985	623243	+	AK301633 TSC_hg19_v1_chr13_+_30070532	690940	+	BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##BC150245|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AB018317|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_001033602|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK301633|MTUS2|23281|microtubule associated tumor suppressor candidate 2	0.999921	CTCF.p2:-26:1.000
chr2	197202176	197202268	reg1020613.p2	6.268	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-165904	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-165943	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-268727	-	BC117194 BC117198 AB037722 NM_020760	255070	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	302135	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	462191	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.939933	CTCF.p2:42:0.940
chr2	199884761	199884861	reg1022929.p1	6.268	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	-1215441	+	NM_197970 AK302817	-1233825	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-1234771	-	TSC_hg19_v1_chr2_-_200213802 AK025127	329039	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	435991	-	TSC_hg19_v1_chr2_-_200322238 AJ438951	437439	-	AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2##AJ438951|SATB2|23314|SATB homeobox 2	0.165774	
chr3	8343770	8343918	reg1024115.p1	6.268	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	-1440946	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	-1441045	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-3114353	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	199486	-	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	199671	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	199737	+	X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1	0.981358	CTCF.p2:23:0.981
chr7	155008636	155008745	reg1019913.p1	6.268	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	-146113	+	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	-213479	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	-214020	-	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	80832	+	AK291675 TSC_hg19_v1_chr7_+_155089667	80954	+	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	242074	+	BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##AK291675|INSIG1|3638|insulin induced gene 1##BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2	0.0	
chr7	99869885	99870059	reg1023576.p2	6.268	+	BC065200 AK290510 TSC_hg19_v1_chr7_-_99869856 BC044886 BC090867 BC033723 BC053367 NM_178831	-142	-	NM_024070	-53102	+	TSC_hg19_v1_chr7_+_99775540 NM_012447 AK292394 BC146806 AK302693 BC047490 BC028684 AL833816 BC140932	-94409	+	BC056606 NM_001004351	35352	+	AB103084 TSC_hg19_v1_chr7_-_99933502 BC038996 D38435 D38499 BC110395 BC044214 BC067809	63569	-	TSC_hg19_v1_chr7_+_99933747 AK056412 AK310352	63783	+	BC065200|GATS|352954|GATS, stromal antigen 3 opposite strand##AK290510|GATS|352954|GATS, stromal antigen 3 opposite strand##BC044886|GATS|352954|GATS, stromal antigen 3 opposite strand##BC090867|GATS|352954|GATS, stromal antigen 3 opposite strand##BC033723|GATS|352954|GATS, stromal antigen 3 opposite strand##BC053367|GATS|352954|GATS, stromal antigen 3 opposite strand##NM_178831|GATS|352954|GATS, stromal antigen 3 opposite strand##NM_024070|PVRIG|79037|poliovirus receptor related immunoglobulin domain containing##NM_012447|STAG3|10734|stromal antigen 3##AK292394|STAG3|10734|stromal antigen 3##BC146806|STAG3|10734|stromal antigen 3##AK302693|STAG3|10734|stromal antigen 3##BC047490|STAG3|10734|stromal antigen 3##BC028684|STAG3|10734|stromal antigen 3##AL833816|STAG3|10734|stromal antigen 3##BC140932|STAG3|10734|stromal antigen 3##BC056606|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)##NM_001004351|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)##BC038996|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38435|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38499|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC110395|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC044214|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC067809|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##AK056412|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AK310352|PILRB|29990|paired immunoglobin-like type 2 receptor beta	0.0	
chr9	5263727	5263821	reg1020174.p1	6.268	+	BC026254 AK291543 L34838 NM_002195 CU693182	-32312	+	AF135824 HQ258002 AF156094 NM_007179 BC126473 BC126475	-78161	-	TSC_hg19_v1_chr9_+_4985271 AF005216 NM_004972 AF058925	-278515	+	HQ258745 NM_005059 NM_134441 X00948 BC126415 BC126419	40820	-	X00949 DQ893302 DQ896468 BC005956 NM_006911	76034	-	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	174106	-	BC026254|INSL4|3641|insulin-like 4 (placenta)##AK291543|INSL4|3641|insulin-like 4 (placenta)##L34838|INSL4|3641|insulin-like 4 (placenta)##NM_002195|INSL4|3641|insulin-like 4 (placenta)##AF135824|INSL6|11172|insulin-like 6##HQ258002|INSL6|11172|insulin-like 6##AF156094|INSL6|11172|insulin-like 6##NM_007179|INSL6|11172|insulin-like 6##BC126473|INSL6|11172|insulin-like 6##BC126475|INSL6|11172|insulin-like 6##AF005216|JAK2|3717|Janus kinase 2##NM_004972|JAK2|3717|Janus kinase 2##AF058925|JAK2|3717|Janus kinase 2##HQ258745|RLN2|6019|relaxin 2##NM_005059|RLN2|6019|relaxin 2##NM_134441|RLN2|6019|relaxin 2##X00948|RLN2|6019|relaxin 2##BC126415|RLN2|6019|relaxin 2##BC126419|RLN2|6019|relaxin 2##X00949|RLN1|6013|relaxin 1##DQ893302|RLN1|6013|relaxin 1##DQ896468|RLN1|6013|relaxin 1##BC005956|RLN1|6013|relaxin 1##NM_006911|RLN1|6013|relaxin 1##BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46	0.865511	CTCF.p2:4:0.866
chr15	67378215	67378396	reg1022272.p3	6.267	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	-19904	+	TSC_hg19_v1_chr15_+_67358179 AK290881	-20130	+	NM_001142861 U59914	-377376	+	NM_001145102 AK316017	39818	+	AK298139 NM_001145103	52053	+	NM_001145104 AK300614 AK301348	80191	+	NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##AK290881|SMAD3|4088|SMAD family member 3##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3##AK298139|SMAD3|4088|SMAD family member 3##NM_001145103|SMAD3|4088|SMAD family member 3##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3	0.0	
chr18	54456975	54457084	reg1023351.p1	6.267	+	TSC_hg19_v1_chr18_+_54424445 BC050352	-32581	+	TSC_hg19_v1_chr18_+_54318593 AK057141 NM_015285 NM_052834 AB011113 BC150282	-138423	+	TSC_hg19_v1_chr18_-_54305956 BC001156 AF003938 NM_004786	-151115	-	AK127964 TSC_hg19_v1_chr18_+_54814333 BC021740 BC035018 AK301799	357310	+	AB208996 NM_015879	562691	+	TSC_hg19_v1_chr18_+_55102810 NM_004852 Y18198 BC108925 BC108926	645836	+	BC050352|WDR7|23335|WD repeat domain 7##AK057141|WDR7|23335|WD repeat domain 7##NM_015285|WDR7|23335|WD repeat domain 7##NM_052834|WDR7|23335|WD repeat domain 7##AB011113|WDR7|23335|WD repeat domain 7##BC150282|WDR7|23335|WD repeat domain 7##BC001156|TXNL1|9352|thioredoxin-like 1##AF003938|TXNL1|9352|thioredoxin-like 1##NM_004786|TXNL1|9352|thioredoxin-like 1##AK127964|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC021740|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC035018|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK301799|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_004852|ONECUT2|9480|one cut homeobox 2##Y18198|ONECUT2|9480|one cut homeobox 2##BC108925|ONECUT2|9480|one cut homeobox 2##BC108926|ONECUT2|9480|one cut homeobox 2	0.0	
chr19	56587903	56588068	reg1025512.p1	6.266	+	AB527195 AY054986 AY154460 NM_153447	-76895	+	NM_176811 AB527377 AY154463	-128753	+	AB527194 AY154468 NM_176810	-144297	-	TSC_hg19_v1_chr19_-_56632629 BC037737	44629	-	TSC_hg19_v1_chr19_-_56632646 BC012495 BC077728 NM_001002836	44661	-	TSC_hg19_v1_chr19_+_56652664 NM_001253792 NM_018337 AL834130 AK223408	64620	+	AY054986|NLRP5|126206|NLR family, pyrin domain containing 5##AY154460|NLRP5|126206|NLR family, pyrin domain containing 5##NM_153447|NLRP5|126206|NLR family, pyrin domain containing 5##NM_176811|NLRP8|126205|NLR family, pyrin domain containing 8##AY154463|NLRP8|126205|NLR family, pyrin domain containing 8##AY154468|NLRP13|126204|NLR family, pyrin domain containing 13##NM_176810|NLRP13|126204|NLR family, pyrin domain containing 13##BC037737|ZNF787|126208|zinc finger protein 787##BC012495|ZNF787|126208|zinc finger protein 787##BC077728|ZNF787|126208|zinc finger protein 787##NM_001002836|ZNF787|126208|zinc finger protein 787##NM_001253792|ZNF444|55311|zinc finger protein 444##NM_018337|ZNF444|55311|zinc finger protein 444##AL834130|ZNF444|55311|zinc finger protein 444##AK223408|ZNF444|55311|zinc finger protein 444	0.184675	
chr5	76070329	76070479	reg1000903.p1	6.266	+	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	-58448	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	-151259	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	-371288	+	NM_005242 BC018130 TSC_hg19_v1_chr5_+_76114854 U34038	44448	+	TSC_hg19_v1_chr5_+_76114883 BC012453 AY336105 BT009856 CU676194 CU680330 DQ890966 DQ894139	44540	+	BC022320 NM_130772	75421	+	AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_005242|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC018130|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##U34038|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC012453|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##AY336105|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BT009856|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ890966|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ894139|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC022320|S100Z|170591|S100 calcium binding protein Z##NM_130772|S100Z|170591|S100 calcium binding protein Z	0.0	
chr6	6561253	6561359	reg1021714.p1	6.266	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-240396	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-240421	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-553609	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	27644	+	BC039678 TSC_hg19_v1_chr6_+_6725205	163855	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	546520	+	NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1	0.863137	CTCF.p2:-2:0.863
chrX	128906948	128907099	reg1021474.p2	6.266	+	AK300954 U90724 NM_003399 BC126174 BC143901	-34047	+	BC021104 NM_017413	-118101	-	TSC_hg19_v1_chrX_+_128674247 AK226116 BC094726 NM_000276 NM_001587 U57627 AK293107 BC130612 BC144106 BC025253 AB384825	-232725	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	6864	+	TSC_hg19_v1_chrX_+_128913898 AK314869 AK292023 BC051881 AL049683 AB528892	6961	+	AK001524 BC000035 AB209807 TSC_hg19_v1_chrX_-_128977481 NM_001008222	70402	-	AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC021104|APLN|8862|apelin##NM_017413|APLN|8862|apelin##AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe##U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe##AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3##AK314869|SASH3|54440|SAM and SH3 domain containing 3##AK292023|SASH3|54440|SAM and SH3 domain containing 3##BC051881|SASH3|54440|SAM and SH3 domain containing 3##AL049683|SASH3|54440|SAM and SH3 domain containing 3##AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9	0.823434	CTCF.p2:-26:0.823
chr13	46645879	46645995	reg1022776.p1	6.265	+	TSC_hg19_v1_chr13_+_46626953 AK095119 AK124928	-18966	+	BC019000 TSC_hg19_v1_chr13_-_46626864 AK056422 AY283618 NM_015070	-19054	-	AK096522 AB463764 BC041372 NM_198849	-220137	-	AB590176 BT006936 DQ890567 EU176478 TSC_hg19_v1_chr13_-_46679154 CU675521 AK290829 AB011969 M75106 BC007057 NM_001872 NM_016413	33239	-	TSC_hg19_v1_chr13_-_46742711 CR936795	96758	-	TSC_hg19_v1_chr13_-_46756291 J02923	110355	-	AK095119|LOC100509894|100509894|uncharacterized LOC100509894##AK124928|LOC100509894|100509894|uncharacterized LOC100509894##BC019000|ZC3H13|23091|zinc finger CCCH-type containing 13##AK056422|ZC3H13|23091|zinc finger CCCH-type containing 13##AY283618|ZC3H13|23091|zinc finger CCCH-type containing 13##NM_015070|ZC3H13|23091|zinc finger CCCH-type containing 13##BC041372|SIAH3|283514|seven in absentia homolog 3 (Drosophila)##NM_198849|SIAH3|283514|seven in absentia homolog 3 (Drosophila)##BT006936|CPB2|1361|carboxypeptidase B2 (plasma)##DQ890567|CPB2|1361|carboxypeptidase B2 (plasma)##EU176478|CPB2|1361|carboxypeptidase B2 (plasma)##AK290829|CPB2|1361|carboxypeptidase B2 (plasma)##AB011969|CPB2|1361|carboxypeptidase B2 (plasma)##M75106|CPB2|1361|carboxypeptidase B2 (plasma)##BC007057|CPB2|1361|carboxypeptidase B2 (plasma)##NM_001872|CPB2|1361|carboxypeptidase B2 (plasma)##NM_016413|CPB2|1361|carboxypeptidase B2 (plasma)##CR936795|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)##J02923|LCP1|3936|lymphocyte cytosolic protein 1 (L-plastin)	0.690356	CTCF.p2:-5:0.690
chr16	25138234	25138333	reg1020545.p1	6.265	+	TSC_hg19_v1_chr16_+_25123102 AK025884 AK225271 AK291885 AK314409 BC014217 AF037601 CU674610 AL137283 CU676933	-15086	+	TSC_hg19_v1_chr16_+_25123062 NM_001032391 NM_016309 AK223364 AF151826 BC001214	-15222	+	TSC_hg19_v1_chr16_+_25078227 BC023651 AK093382	-59994	+	AB013456 AF067797 NM_001169 AK222975 AK222964	90017	+	BX648785 AK131342 NM_001012981 AK302399	130576	-	TSC_hg19_v1_chr16_-_25269141 AK303472	130922	-	AK025884|LCMT1|51451|leucine carboxyl methyltransferase 1##AK225271|LCMT1|51451|leucine carboxyl methyltransferase 1##AK291885|LCMT1|51451|leucine carboxyl methyltransferase 1##AK314409|LCMT1|51451|leucine carboxyl methyltransferase 1##BC014217|LCMT1|51451|leucine carboxyl methyltransferase 1##AF037601|LCMT1|51451|leucine carboxyl methyltransferase 1##AL137283|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_001032391|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_016309|LCMT1|51451|leucine carboxyl methyltransferase 1##AK223364|LCMT1|51451|leucine carboxyl methyltransferase 1##AF151826|LCMT1|51451|leucine carboxyl methyltransferase 1##BC001214|LCMT1|51451|leucine carboxyl methyltransferase 1##BC023651|LOC283887|283887|uncharacterized LOC283887##AK093382|LOC283887|283887|uncharacterized LOC283887##AB013456|AQP8|343|aquaporin 8##AF067797|AQP8|343|aquaporin 8##NM_001169|AQP8|343|aquaporin 8##AK222975|AQP8|343|aquaporin 8##AK222964|AQP8|343|aquaporin 8##BX648785|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK131342|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001012981|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK302399|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2	0.911348	CTCF.p2:7:0.911
chr7	51135485	51135619	reg1026281.p1	6.265	+	TSC_hg19_v1_chr7_-_50861150 NM_001001555	-274398	-	D86962 TSC_hg19_v1_chr7_-_50860699	-274863	-	AF000017 AB000731 AF001534 NM_001001549 NM_005311 U34355	-335519	-	AB385366 TSC_hg19_v1_chr7_-_51384416 BC136441 BC144099	248828	-	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	248934	-	NM_182595	1967796	+	NM_001001555|GRB10|2887|growth factor receptor-bound protein 10##D86962|GRB10|2887|growth factor receptor-bound protein 10##AF000017|GRB10|2887|growth factor receptor-bound protein 10##AB000731|GRB10|2887|growth factor receptor-bound protein 10##AF001534|GRB10|2887|growth factor receptor-bound protein 10##NM_001001549|GRB10|2887|growth factor receptor-bound protein 10##NM_005311|GRB10|2887|growth factor receptor-bound protein 10##U34355|GRB10|2887|growth factor receptor-bound protein 10##BC136441|COBL|23242|cordon-bleu homolog (mouse)##BC144099|COBL|23242|cordon-bleu homolog (mouse)##BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12	0.995873	CTCF.p2:4:0.996
chrX	124265131	124265250	reg1022852.p2	6.265	+	HE578281 BC140783 BC144542 BC144543 AF100772 NM_001163278 NM_001163279 NM_014253	-167557	-	NM_001114937 NM_002351 AL023657 AK311645	-785015	+	AK026678 TSC_hg19_v1_chrX_+_123234596	-1030660	+	NM_001195272	188778	+	BC136673 BC136674 NM_001013628	1034889	-	TSC_hg19_v1_chrX_-_125686794 BC035674 NM_178470	1421626	-	BC140783|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144542|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144543|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##AF100772|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163278|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163279|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_014253|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001114937|SH2D1A|4068|SH2 domain containing 1A##NM_002351|SH2D1A|4068|SH2 domain containing 1A##AL023657|SH2D1A|4068|SH2 domain containing 1A##AK311645|SH2D1A|4068|SH2 domain containing 1A##AK026678|STAG2|10735|stromal antigen 2##NM_001195272|LOC100129520|100129520|testis expressed sequence 13-like##BC136673|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##BC136674|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##NM_001013628|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##BC035674|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##NM_178470|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1	0.902453	CTCF.p2:5:0.902
chr16	56637642	56637751	reg1020977.p1	6.264	+	NM_005954	-14430	+	BC113442 BC113444 NM_032935	-38736	+	TSC_hg19_v1_chr16_-_56553962 AB208905 NM_031885	-83711	-	NM_005953 TSC_hg19_v1_chr16_+_56642498 BC007034 BC062435 D28442 BC070289 V00594 AY077636 M26637 AB463881 BT007315 S52379 X97260	4826	+	NM_175617 TSC_hg19_v1_chr16_+_56659593	21892	+	BC131609 BC062734 TSC_hg19_v1_chr16_+_56659697 AF495759 AF348996 S68949	22025	+	NM_005954|MT3|4504|metallothionein 3##BC113442|MT4|84560|metallothionein 4##BC113444|MT4|84560|metallothionein 4##NM_032935|MT4|84560|metallothionein 4##AB208905|BBS2|583|Bardet-Biedl syndrome 2##NM_031885|BBS2|583|Bardet-Biedl syndrome 2##NM_005953|MT2A|4502|metallothionein 2A##BC007034|MT2A|4502|metallothionein 2A##D28442|MT2A|4502|metallothionein 2A##BC070289|MT2A|4502|metallothionein 2A##V00594|MT2A|4502|metallothionein 2A##M26637|MT2A|4502|metallothionein 2A##BT007315|MT2A|4502|metallothionein 2A##S52379|MT2A|4502|metallothionein 2A##X97260|MT2A|4502|metallothionein 2A##NM_175617|MT1E|4493|metallothionein 1E##BC131609|MT1E|4493|metallothionein 1E##BC062734|MT1E|4493|metallothionein 1E##AF495759|MT1E|4493|metallothionein 1E##S68949|MT1E|4493|metallothionein 1E	0.031179	
chr9	139944401	139944504	reg1019203.p1	6.264	+	TSC_hg19_v1_chr9_-_139940630 AF327349 AK074793 AF285836 NM_015392	-3813	-	TSC_hg19_v1_chr9_-_139940559 BC004217	-3890	-	TSC_hg19_v1_chr9_-_139940543 AK225091 AF272357	-3943	-	AF144748 EF495152 CU690182 DQ892410 DQ895623 U91510 BC035738 NM_001246 NM_203468	4023	-	TSC_hg19_v1_chr9_-_139965024 BC048267 NM_178448 DQ150361	20581	-	TSC_hg19_v1_chr9_+_139971968 NM_207309	27501	+	AF327349|NPDC1|56654|neural proliferation, differentiation and control, 1##AK074793|NPDC1|56654|neural proliferation, differentiation and control, 1##AF285836|NPDC1|56654|neural proliferation, differentiation and control, 1##NM_015392|NPDC1|56654|neural proliferation, differentiation and control, 1##BC004217|NPDC1|56654|neural proliferation, differentiation and control, 1##AK225091|NPDC1|56654|neural proliferation, differentiation and control, 1##AF272357|NPDC1|56654|neural proliferation, differentiation and control, 1##AF144748|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##EF495152|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##DQ892410|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##DQ895623|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##U91510|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##BC035738|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##NM_001246|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##NM_203468|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##BC048267|C9orf140|89958|chromosome 9 open reading frame 140##NM_178448|C9orf140|89958|chromosome 9 open reading frame 140##DQ150361|C9orf140|89958|chromosome 9 open reading frame 140##NM_207309|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	0.950579	CTCF.p2:-5:0.951
chr17	79827354	79827487	reg1021005.p1	6.263	+	TSC_hg19_v1_chr17_-_79818514 NM_000918	-8883	-	AK298005 TSC_hg19_v1_chr17_-_79818446	-8975	-	TSC_hg19_v1_chr17_-_79818439 AK297081 AK095938 AK300561	-8990	-	TSC_hg19_v1_chr17_-_79828694 NM_001185077	1320	-	TSC_hg19_v1_chr17_-_79829214 BC016185 BC024258 BC075827 X69550 BC027730 BC028333 BC013846 BC009759 AK312347 AK293147	1784	-	BC005851 BC005875 TSC_hg19_v1_chr17_-_79829249 BC106044 AK300816	1828	-	NM_000918|P4HB|5034|prolyl 4-hydroxylase, beta polypeptide##AK298005|P4HB|5034|prolyl 4-hydroxylase, beta polypeptide##AK297081|P4HB|5034|prolyl 4-hydroxylase, beta polypeptide##AK095938|P4HB|5034|prolyl 4-hydroxylase, beta polypeptide##AK300561|P4HB|5034|prolyl 4-hydroxylase, beta polypeptide##NM_001185077|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##BC016185|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##BC024258|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##BC075827|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##X69550|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##BC027730|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##BC028333|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##BC013846|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##BC009759|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##AK312347|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##AK293147|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##BC005851|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##BC005875|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##BC106044|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha##AK300816|ARHGDIA|396|Rho GDP dissociation inhibitor (GDI) alpha	0.810236	CTCF.p2:-39:0.810
chr19	45943069	45943190	reg1003270.p2	6.263	+	TSC_hg19_v1_chr19_-_45927176 NM_001166049 NM_001983	-15954	-	TSC_hg19_v1_chr19_-_45927167 AF433652 AF001925 M13194 M28650	-15972	-	TSC_hg19_v1_chr19_-_45927109 BC008930 AB069681 AK314884	-16019	-	TSC_hg19_v1_chr19_+_45971253 EU178109 EU178110 EU178111 EU178112 EU178113 EU178114 EU178115 EU178116 L49169 NM_001114171 NM_006732 AK097324 AK225070 BC051767 BC036724 BC063042	28140	+	AF004224 TSC_hg19_v1_chr19_-_45996506 NM_206901	53364	-	TSC_hg19_v1_chr19_-_46000271 AF004222 BC014244 BC073874 AK291967 NM_005619 NM_206900	57118	-	NM_001166049|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##NM_001983|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AF433652|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AF001925|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##M13194|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##M28650|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##BC008930|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AB069681|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##AK314884|ERCC1|2067|excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)##EU178109|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178110|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178111|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178112|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178113|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178114|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178115|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##EU178116|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##L49169|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_001114171|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##NM_006732|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##AK225070|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##BC036724|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##BC063042|FOSB|2354|FBJ murine osteosarcoma viral oncogene homolog B##AF004224|RTN2|6253|reticulon 2##NM_206901|RTN2|6253|reticulon 2##AF004222|RTN2|6253|reticulon 2##BC014244|RTN2|6253|reticulon 2##BC073874|RTN2|6253|reticulon 2##AK291967|RTN2|6253|reticulon 2##NM_005619|RTN2|6253|reticulon 2##NM_206900|RTN2|6253|reticulon 2	0.175803	
chr2	113642415	113642595	reg1002549.p1	6.263	+	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	-48161	-	NM_000575 BC035169	-99533	-	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	-120283	-	AF167368 AF200496 NM_014439 NM_173202 NM_173203 NM_173204 BC020637 AB451333 AB451478 AB590279 AF251119 AF251120 AY071840 AY071841 CU676594 DQ891388	28063	+	AF201832 NM_173205	30264	+	AY359111 AF200492 NM_019618 AF206696	93096	+	X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##AF167368|IL37|27178|interleukin 37##AF200496|IL37|27178|interleukin 37##NM_014439|IL37|27178|interleukin 37##NM_173202|IL37|27178|interleukin 37##NM_173203|IL37|27178|interleukin 37##NM_173204|IL37|27178|interleukin 37##BC020637|IL37|27178|interleukin 37##AB451333|IL37|27178|interleukin 37##AB451478|IL37|27178|interleukin 37##AF251119|IL37|27178|interleukin 37##AF251120|IL37|27178|interleukin 37##AY071840|IL37|27178|interleukin 37##AY071841|IL37|27178|interleukin 37##DQ891388|IL37|27178|interleukin 37##AF201832|IL37|27178|interleukin 37##NM_173205|IL37|27178|interleukin 37##AY359111|IL36G|56300|interleukin 36, gamma##AF200492|IL36G|56300|interleukin 36, gamma##NM_019618|IL36G|56300|interleukin 36, gamma##AF206696|IL36G|56300|interleukin 36, gamma	0.0	
chr7	29788053	29788162	reg1022537.p2	6.263	+	TSC_hg19_v1_chr7_+_29603500 BC018144	-184576	+	TSC_hg19_v1_chr7_+_29603450 BC029131 NM_175887	-184688	+	NM_001039936	-268622	+	TSC_hg19_v1_chr7_+_29846126 NM_001080529	58033	+	TSC_hg19_v1_chr7_-_30029417 AB071705 AK295713 D83777 AK293462 BC040492 NM_001145515 NM_014766 NM_001145513	241401	-	AK295172 NM_001145514	241797	-	BC018144|PRR15|222171|proline rich 15##BC029131|PRR15|222171|proline rich 15##NM_175887|PRR15|222171|proline rich 15##NM_001039936|CHN2|1124|chimerin (chimaerin) 2##NM_001080529|WIPF3|644150|WAS/WASL interacting protein family, member 3##AB071705|SCRN1|9805|secernin 1##AK295713|SCRN1|9805|secernin 1##D83777|SCRN1|9805|secernin 1##AK293462|SCRN1|9805|secernin 1##BC040492|SCRN1|9805|secernin 1##NM_001145515|SCRN1|9805|secernin 1##NM_014766|SCRN1|9805|secernin 1##NM_001145513|SCRN1|9805|secernin 1##AK295172|SCRN1|9805|secernin 1##NM_001145514|SCRN1|9805|secernin 1	0.72508	CTCF.p2:-3:0.725
chr7	74202958	74203076	reg1023644.p1	6.263	+	BC002816 NM_000265 BC065731 AK127905 AK223217 AK292094 AK316341 AK316552 AB590366 CU678218 DQ893150 DQ896445 U25793	-14665	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	-130895	+	TSC_hg19_v1_chr7_+_74072046 BC070484	-130973	+	AY260739 AY312853 AY336980 BC047706 BC061590 AK225845 AY336979 BC136849 BC067859 AK291431 AY336981 BC038098 NM_173537 AK098269	64822	-	TSC_hg19_v1_chr7_-_74306679 BC002581	103658	-	TSC_hg19_v1_chr7_-_74306685 AK303473 AK307228 AK309007	103666	-	BC002816|NCF1|653361|neutrophil cytosolic factor 1##NM_000265|NCF1|653361|neutrophil cytosolic factor 1##BC065731|NCF1|653361|neutrophil cytosolic factor 1##AK127905|NCF1|653361|neutrophil cytosolic factor 1##AK223217|NCF1|653361|neutrophil cytosolic factor 1##AK292094|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316341|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316552|NCF1|653361|neutrophil cytosolic factor 1##DQ893150|NCF1|653361|neutrophil cytosolic factor 1##DQ896445|NCF1|653361|neutrophil cytosolic factor 1##U25793|NCF1|653361|neutrophil cytosolic factor 1##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##AY260739|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336980|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC047706|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC061590|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336979|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AY336981|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC038098|GTF2IRD2|84163|GTF2I repeat domain containing 2##NM_173537|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC002581|STAG3L2|442582|stromal antigen 3-like 2##AK303473|STAG3L2|442582|stromal antigen 3-like 2##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2	0.0	
chrX	70447357	70447464	reg1021684.p1	6.263	+	TSC_hg19_v1_chrX_+_70443460 AB590364 BT019329 DQ893515 DQ896494	-3902	+	NM_000166 BC022426 AK313474 BC002805	-4310	+	TSC_hg19_v1_chrX_+_70435092 BC039198 X04325	-12315	+	TSC_hg19_v1_chrX_-_70473964 AB002383	26546	-	TSC_hg19_v1_chrX_-_70474032 NM_201599	26598	-	BC069057 BC013009 AK290762 NM_001171163 NM_005096 TSC_hg19_v1_chrX_-_70474540	27076	-	BT019329|GJB1|2705|gap junction protein, beta 1, 32kDa##DQ893515|GJB1|2705|gap junction protein, beta 1, 32kDa##DQ896494|GJB1|2705|gap junction protein, beta 1, 32kDa##NM_000166|GJB1|2705|gap junction protein, beta 1, 32kDa##BC022426|GJB1|2705|gap junction protein, beta 1, 32kDa##AK313474|GJB1|2705|gap junction protein, beta 1, 32kDa##BC002805|GJB1|2705|gap junction protein, beta 1, 32kDa##BC039198|GJB1|2705|gap junction protein, beta 1, 32kDa##X04325|GJB1|2705|gap junction protein, beta 1, 32kDa##AB002383|ZMYM3|9203|zinc finger, MYM-type 3##NM_201599|ZMYM3|9203|zinc finger, MYM-type 3##BC069057|ZMYM3|9203|zinc finger, MYM-type 3##BC013009|ZMYM3|9203|zinc finger, MYM-type 3##AK290762|ZMYM3|9203|zinc finger, MYM-type 3##NM_001171163|ZMYM3|9203|zinc finger, MYM-type 3##NM_005096|ZMYM3|9203|zinc finger, MYM-type 3	0.81634	CTCF.p2:16:0.816
chr20	38027442	38027575	reg1024754.p1	6.262	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-436519	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-472440	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-472519	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1290369	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1629986	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1630156	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.0	
chr2	107199101	107199248	reg1023468.p2	6.262	+	NM_001144013	-114374	-	TSC_hg19_v1_chr2_-_106810781 NM_025076	-388369	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	-388416	-	FJ433885 TSC_hg19_v1_chr2_-_107502508	303311	-	AB058780 NM_001142351 TSC_hg19_v1_chr2_-_107502624	303445	-	TSC_hg19_v1_chr2_-_107503063 FJ433884	303888	-	NM_001144013|RGPD3|653489|RANBP2-like and GRIP domain containing 3##NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	1.352847	CTCF.p2:1:0.422	CTCF.p2:27:0.931
chr8	64236474	64236611	reg1024191.p1	6.262	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-155342	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-155398	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-237915	-	NM_152414 AK293979	1256316	+	TSC_hg19_v1_chr8_+_65493611 AK091333	1257122	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	1474737	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.981512	CTCF.p2:0:0.982
chr9	128018378	128018515	reg1027862.p1	6.262	+	TSC_hg19_v1_chr9_-_128003635 NM_005347	-14732	-	TSC_hg19_v1_chr9_-_128003623 AK293604 X87949	-14823	-	AF188611 AB527282 AF216292 DQ892173 DQ895368 AJ271729 TSC_hg19_v1_chr9_-_128003594 BC020235	-14966	-	TSC_hg19_v1_chr9_+_128024074 AK294542	5631	+	TSC_hg19_v1_chr9_+_128024097 AK296381	5652	+	TSC_hg19_v1_chr9_+_128024104 BC110990	5658	+	NM_005347|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)##AK293604|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)##X87949|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)##AF188611|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)##AF216292|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)##DQ892173|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)##DQ895368|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)##AJ271729|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)##BC020235|HSPA5|3309|heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa)##AK294542|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AK296381|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC110990|GAPVD1|26130|GTPase activating protein and VPS9 domains 1	0.143328	
chr10	60144923	60145049	reg1021398.p1	6.261	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	-50150	+	BC005962 TSC_hg19_v1_chr10_+_60028929 NM_018464 BC059168 AF220049 BC008474 BC007043 AY960578 AK312017	-116040	+	TSC_hg19_v1_chr10_-_60027655 BC016612 BC065709 NM_152230	-117325	-	BC029815 TSC_hg19_v1_chr10_+_60145169 AK312558 M62810 NM_003201 BC018628 BC104482 BC126366 EU279428 HQ258758 AB451241 AB451366 AB464302 BT019658 BT019659 CR407653	219	+	TSC_hg19_v1_chr10_+_60272869 NM_001080512 AY726586	127926	+	TSC_hg19_v1_chr10_-_60936189 AK055418	791220	-	NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005962|CISD1|55847|CDGSH iron sulfur domain 1##NM_018464|CISD1|55847|CDGSH iron sulfur domain 1##BC059168|CISD1|55847|CDGSH iron sulfur domain 1##AF220049|CISD1|55847|CDGSH iron sulfur domain 1##BC008474|CISD1|55847|CDGSH iron sulfur domain 1##BC007043|CISD1|55847|CDGSH iron sulfur domain 1##AY960578|CISD1|55847|CDGSH iron sulfur domain 1##AK312017|CISD1|55847|CDGSH iron sulfur domain 1##BC016612|IPMK|253430|inositol polyphosphate multikinase##BC065709|IPMK|253430|inositol polyphosphate multikinase##NM_152230|IPMK|253430|inositol polyphosphate multikinase##BC029815|TFAM|7019|transcription factor A, mitochondrial##AK312558|TFAM|7019|transcription factor A, mitochondrial##M62810|TFAM|7019|transcription factor A, mitochondrial##NM_003201|TFAM|7019|transcription factor A, mitochondrial##BC018628|TFAM|7019|transcription factor A, mitochondrial##BC104482|TFAM|7019|transcription factor A, mitochondrial##BC126366|TFAM|7019|transcription factor A, mitochondrial##EU279428|TFAM|7019|transcription factor A, mitochondrial##HQ258758|TFAM|7019|transcription factor A, mitochondrial##AB451241|TFAM|7019|transcription factor A, mitochondrial##AB451366|TFAM|7019|transcription factor A, mitochondrial##BT019658|TFAM|7019|transcription factor A, mitochondrial##BT019659|TFAM|7019|transcription factor A, mitochondrial##CR407653|TFAM|7019|transcription factor A, mitochondrial##NM_001080512|BICC1|80114|bicaudal C homolog 1 (Drosophila)##AY726586|BICC1|80114|bicaudal C homolog 1 (Drosophila)	0.087858	
chr10	94766331	94766470	reg1027057.p1	6.261	+	AK293857 NM_019053 AF220217 TSC_hg19_v1_chr10_+_94608276 AL832501 EF571007 AK315544 BC028395 CU688490 EU832839 GQ129240	-158143	+	NM_001013848	-171931	+	TSC_hg19_v1_chr10_+_94449711 NM_002729 AK309463 AK314891 BC014336 BC015110 L16499 X67235 AB528006 BC050638 EU446478	-316691	+	AY356349 NM_183374	54620	+	AK027560 NM_057157	66831	+	AK075374 NM_000783 AF005418	67256	+	AK293857|EXOC6|54536|exocyst complex component 6##NM_019053|EXOC6|54536|exocyst complex component 6##AF220217|EXOC6|54536|exocyst complex component 6##AL832501|EXOC6|54536|exocyst complex component 6##EF571007|EXOC6|54536|exocyst complex component 6##AK315544|EXOC6|54536|exocyst complex component 6##BC028395|EXOC6|54536|exocyst complex component 6##EU832839|EXOC6|54536|exocyst complex component 6##GQ129240|EXOC6|54536|exocyst complex component 6##NM_001013848|EXOC6|54536|exocyst complex component 6##NM_002729|HHEX|3087|hematopoietically expressed homeobox##AK314891|HHEX|3087|hematopoietically expressed homeobox##BC014336|HHEX|3087|hematopoietically expressed homeobox##BC015110|HHEX|3087|hematopoietically expressed homeobox##L16499|HHEX|3087|hematopoietically expressed homeobox##X67235|HHEX|3087|hematopoietically expressed homeobox##BC050638|HHEX|3087|hematopoietically expressed homeobox##EU446478|HHEX|3087|hematopoietically expressed homeobox##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1	0.921411	CTCF.p2:-1:0.921
chr12	115106042	115106152	reg1021834.p1	6.261	+	AB051068 AF221714 NM_000192 NM_080717 Y09445	-259879	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-262173	-	NM_080718 U80987 U89353 AB527531 EU446658	-264393	-	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	16043	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	1608853	-	TSC_hg19_v1_chr12_-_116715263 AY338463	1609063	-	AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5##AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like	0.0	
chr14	77428424	77428605	reg1020960.p2	6.261	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-135719	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-149252	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-149304	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	66170	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	66546	-	AK124327 TSC_hg19_v1_chr14_-_77542533	114019	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.0	
chr14	83176730	83176837	reg1022935.p1	6.261	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-1176556	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-1176635	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-1311957	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	2819690	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	2819758	+	TSC_hg19_v1_chr14_+_85999692 AK297248	2822802	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.998516	CTCF.p2:-3:0.999
chr19	1513986	1514079	reg1022163.p1	6.261	+	BC040620 NM_213604	-845	-	TSC_hg19_v1_chr19_-_1513019 AK302020 AK131571	-1018	-	TSC_hg19_v1_chr19_+_1491191 AX775999 BC008201 NM_138393 AK058112 AK315744 AK293919 CU678889 AY562244	-22898	+	AK054808 NM_001243079	10040	+	DQ225272 DQ225273 TSC_hg19_v1_chr19_-_1567994 AY950680 NM_001174118 NM_203304	53933	-	AB528617 AF072247 NM_003926 TSC_hg19_v1_chr19_-_1592683	78626	-	BC040620|ADAMTSL5|339366|ADAMTS-like 5##NM_213604|ADAMTSL5|339366|ADAMTS-like 5##AK302020|ADAMTSL5|339366|ADAMTS-like 5##AK131571|ADAMTSL5|339366|ADAMTS-like 5##AX775999|REEP6|92840|receptor accessory protein 6##BC008201|REEP6|92840|receptor accessory protein 6##NM_138393|REEP6|92840|receptor accessory protein 6##AK058112|REEP6|92840|receptor accessory protein 6##AK315744|REEP6|92840|receptor accessory protein 6##AK293919|REEP6|92840|receptor accessory protein 6##AY562244|REEP6|92840|receptor accessory protein 6##AK054808|PLK5|126520|polo-like kinase 5##NM_001243079|PLK5|126520|polo-like kinase 5##DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)##DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)##AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)##NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)##NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)##AF072247|MBD3|53615|methyl-CpG binding domain protein 3##NM_003926|MBD3|53615|methyl-CpG binding domain protein 3	0.986388	CTCF.p2:-6:0.986
chr3	88054344	88054490	reg1023126.p2	6.261	+	NM_000866	-22692	+	AB587506 L18781 X72215 X62429 D10216 NM_000306 NM_001122757	-728744	-	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	-777882	+	BC052980 TSC_hg19_v1_chr3_-_88108150 AL117392 NM_001008390 NM_003663	53726	-	AF543494 NM_018293	133844	+	NM_001195308 BC005222	144607	-	NM_000866|HTR1F|3355|5-hydroxytryptamine (serotonin) receptor 1F##L18781|POU1F1|5449|POU class 1 homeobox 1##X72215|POU1F1|5449|POU class 1 homeobox 1##X62429|POU1F1|5449|POU class 1 homeobox 1##D10216|POU1F1|5449|POU class 1 homeobox 1##NM_000306|POU1F1|5449|POU class 1 homeobox 1##NM_001122757|POU1F1|5449|POU class 1 homeobox 1##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B##BC052980|CGGBP1|8545|CGG triplet repeat binding protein 1##AL117392|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_001008390|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_003663|CGGBP1|8545|CGG triplet repeat binding protein 1##AF543494|ZNF654|55279|zinc finger protein 654##NM_018293|ZNF654|55279|zinc finger protein 654##NM_001195308|CGGBP1|8545|CGG triplet repeat binding protein 1##BC005222|CGGBP1|8545|CGG triplet repeat binding protein 1	0.75339	CTCF.p2:-5:0.753
chr4	40310197	40310377	reg1022934.p2	6.261	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-111646	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-251755	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-330694	-	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	27158	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	206297	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	207671	-	NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47	0.0	
chr13	109261860	109261974	reg1021025.p1	6.260	+	AB020672 BC146791 NM_015011 AL834447	-13403	+	DQ857728 TSC_hg19_v1_chr13_+_108955871	-306100	+	TSC_hg19_v1_chr13_+_108922564 AY129227 AY129228	-339273	+	AB290159 AK127806 NM_001198950	19652	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	1176991	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	1540818	-	AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##AY129227|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AY129228|TNFSF13B|10673|tumor necrosis factor (ligand) superfamily, member 13b##AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1	0.137335	
chr13	39104743	39104881	reg1025161.p1	6.260	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	-180763	+	NM_016617 TSC_hg19_v1_chr13_+_38923946	-180861	+	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	-660914	-	NM_207361	156360	+	DQ891676 EU176604 AK313632 BC025760 AK304159 NM_001144033 NM_145286	460114	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	507389	-	AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2##DQ891676|STOML3|161003|stomatin (EPB72)-like 3##EU176604|STOML3|161003|stomatin (EPB72)-like 3##AK313632|STOML3|161003|stomatin (EPB72)-like 3##BC025760|STOML3|161003|stomatin (EPB72)-like 3##AK304159|STOML3|161003|stomatin (EPB72)-like 3##NM_001144033|STOML3|161003|stomatin (EPB72)-like 3##NM_145286|STOML3|161003|stomatin (EPB72)-like 3##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1	0.0	
chr11	117680149	117680248	reg1023098.p1	6.259	+	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	-12239	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	-12345	-	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-481367	+	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	15236	-	BT006721 BC005302 NM_021603	18568	-	AL136699 TSC_hg19_v1_chr11_-_117747374 AY358976 BC018652 BC093040 AK311736 AL832811 AK290757	67191	-	AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2##BT006721|FXYD2|486|FXYD domain containing ion transport regulator 2##BC005302|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_021603|FXYD2|486|FXYD domain containing ion transport regulator 2##AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6##AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6	0.272201	CTCF.p2:3:0.272
chr12	18312262	18312384	reg1022527.p1	6.259	+	AK026308 BC042888 NM_024730	-69241	-	AF258348 BC017777 AB044746 AK095595 AK308826 NM_001001395 NM_001243609	-1551282	-	AK308594 AK294909 NM_001243613	-1552312	-	NM_004570	102150	+	AF532185 NM_033123 AK314516 AY035866 AK292279	578630	-	BC016745 NM_033328 AB053259 AK058174 CU677705	578797	+	AK026308|RERGL|79785|RERG/RAS-like##BC042888|RERGL|79785|RERG/RAS-like##NM_024730|RERGL|79785|RERG/RAS-like##AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1##BC016745|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##NM_033328|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AB053259|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AK058174|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	0.997875	CTCF.p2:-2:0.998
chr12	92864378	92864559	reg1019882.p1	6.259	+	AJ845168 NM_001025232	-42545	-	AJ845165 AJ845166 NM_001025233	-46734	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-324825	-	NM_001037671 NM_001178097	232150	+	NM_001004330 AK128530	265819	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	458470	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr14	103966629	103966746	reg1020534.p1	6.259	+	TSC_hg19_v1_chr14_+_103851775 AF465413 BC024773 U64205	-114801	+	TSC_hg19_v1_chr14_+_103851772 BX161395	-114917	+	TSC_hg19_v1_chr14_+_103851700 NM_001128918 NM_001128919 NM_001128920 NM_001128921 NM_002376	-114984	+	CR542268 CU676412 M16364 TSC_hg19_v1_chr14_-_103988931	22193	-	M16451 L47647 TSC_hg19_v1_chr14_-_103989168 BC004914 BC019259 BC008323 BC001190 BC019281 BC010002 AK290101 AK312282 AK298198	22456	-	NM_001823 TSC_hg19_v1_chr14_-_103989206	22515	-	AF465413|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##BC024773|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##U64205|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##BX161395|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128918|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128919|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128920|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128921|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_002376|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##CR542268|CKB|1152|creatine kinase, brain##M16364|CKB|1152|creatine kinase, brain##M16451|CKB|1152|creatine kinase, brain##L47647|CKB|1152|creatine kinase, brain##BC004914|CKB|1152|creatine kinase, brain##BC019259|CKB|1152|creatine kinase, brain##BC008323|CKB|1152|creatine kinase, brain##BC001190|CKB|1152|creatine kinase, brain##BC019281|CKB|1152|creatine kinase, brain##BC010002|CKB|1152|creatine kinase, brain##AK290101|CKB|1152|creatine kinase, brain##AK312282|CKB|1152|creatine kinase, brain##AK298198|CKB|1152|creatine kinase, brain##NM_001823|CKB|1152|creatine kinase, brain	0.999838	CTCF.p2:-13:1.000
chr3	58182358	58182539	reg1021935.p1	6.259	+	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	-188301	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-439246	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-503709	-	NM_004944	17949	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	40835	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	41082	+	AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6	0.0	
chr4	37782569	37782695	reg1022410.p1	6.259	+	TSC_hg19_v1_chr4_-_37687999 BC039540 AK075468 NM_001085399 NM_001085400	-94659	-	AK001879 NM_018302 AK225192	-196763	+	NM_001104629 BC037906	-327057	+	TSC_hg19_v1_chr4_+_37828307 NM_018290 AL136705 AK310927	45668	+	TSC_hg19_v1_chr4_+_37828339 AK223237 AK303374 AF109360 BC010087 AK001845 AK297752 CR457274 CU679607	45711	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	110157	+	BC039540|RELL1|768211|RELT-like 1##AK075468|RELL1|768211|RELT-like 1##NM_001085399|RELL1|768211|RELT-like 1##NM_001085400|RELL1|768211|RELT-like 1##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##NM_018290|PGM2|55276|phosphoglucomutase 2##AL136705|PGM2|55276|phosphoglucomutase 2##AK310927|PGM2|55276|phosphoglucomutase 2##AK223237|PGM2|55276|phosphoglucomutase 2##AK303374|PGM2|55276|phosphoglucomutase 2##AF109360|PGM2|55276|phosphoglucomutase 2##BC010087|PGM2|55276|phosphoglucomutase 2##AK001845|PGM2|55276|phosphoglucomutase 2##AK297752|PGM2|55276|phosphoglucomutase 2##CR457274|PGM2|55276|phosphoglucomutase 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1	0.0	
chr7	86849053	86849180	reg1019422.p1	6.259	+	BT006973 TSC_hg19_v1_chr7_-_86849049 BC002837 NM_024315 AK313794	-175	-	NM_021145 TSC_hg19_v1_chr7_+_86781946 BC070064	-67179	+	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	-67403	+	BT009845 CR542141 BC061927 TSC_hg19_v1_chr7_-_86974833 BC103631 AB007457 AB007458 BC002709 AK292782 AB007455 AB007456 BC068535	125656	-	TSC_hg19_v1_chr7_+_86975006 NM_001143935 NM_001243745 NM_021151 AK127901 AK313487 BC051874 BC039004 BC012483 BC019226 AF073770 AF168793	125878	+	M23234 NM_000443 NM_018849 NM_018850 BC042531	255898	-	BT006973|C7orf23|79161|chromosome 7 open reading frame 23##BC002837|C7orf23|79161|chromosome 7 open reading frame 23##NM_024315|C7orf23|79161|chromosome 7 open reading frame 23##AK313794|C7orf23|79161|chromosome 7 open reading frame 23##NM_021145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BC070064|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BT009845|TP53TG1|11257|TP53 target 1 (non-protein coding)##CR542141|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC061927|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC103631|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007457|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007458|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC002709|TP53TG1|11257|TP53 target 1 (non-protein coding)##AK292782|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007455|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007456|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC068535|TP53TG1|11257|TP53 target 1 (non-protein coding)##NM_001143935|CROT|54677|carnitine O-octanoyltransferase##NM_001243745|CROT|54677|carnitine O-octanoyltransferase##NM_021151|CROT|54677|carnitine O-octanoyltransferase##AK127901|CROT|54677|carnitine O-octanoyltransferase##AK313487|CROT|54677|carnitine O-octanoyltransferase##BC051874|CROT|54677|carnitine O-octanoyltransferase##BC039004|CROT|54677|carnitine O-octanoyltransferase##BC012483|CROT|54677|carnitine O-octanoyltransferase##BC019226|CROT|54677|carnitine O-octanoyltransferase##AF073770|CROT|54677|carnitine O-octanoyltransferase##AF168793|CROT|54677|carnitine O-octanoyltransferase##M23234|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_000443|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018849|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018850|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##BC042531|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4	0.0	
chr11	36078025	36078130	reg1022302.p1	6.258	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	-112466	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-393404	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-393627	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	232876	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	232909	-	NM_001160167 AK055042	239703	+	BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9##NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like	0.283207	CTCF.p2:11:0.283
chr17	30789457	30789605	reg1016792.p3	6.257	+	TSC_hg19_v1_chr17_+_30771536 BC000437 BC004430 AB590847	-17986	+	TSC_hg19_v1_chr17_+_30771527 AK223196 AB003102	-18005	+	TSC_hg19_v1_chr17_+_30771521 AK300342	-18011	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	24540	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	25066	+	TSC_hg19_v1_chr17_+_30814712 AK307275	25229	+	BC000437|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##BC004430|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##AK223196|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##AB003102|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##AK300342|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)	0.995351	CTCF.p2:-2:0.995
chr17	43099444	43099566	reg1021261.p1	6.257	+	TSC_hg19_v1_chr17_-_43045715 BC008798 NM_006688	-53807	-	TSC_hg19_v1_chr17_-_43025057 NM_001080443	-74443	-	BC062609 AB463686 J04569 BC013596 AF419299 BC041765 AK128790 TSC_hg19_v1_chr17_-_42992869 AK098380 AK098758 AK222683 AK295734 AK296259 AK303728 S40719 AK315398 NM_001131019 NM_001242376 NM_002055	-106620	-	TSC_hg19_v1_chr17_-_43128979 AK290755 NM_001128631 AK026608	29424	-	TSC_hg19_v1_chr17_-_43138397 BC006472 BC006546 NM_024819	38907	-	TSC_hg19_v1_chr17_+_43138673 Y17208 Y17209	39152	+	BC008798|C1QL1|10882|complement component 1, q subcomponent-like 1##NM_006688|C1QL1|10882|complement component 1, q subcomponent-like 1##NM_001080443|KIF18B|146909|kinesin family member 18B##BC062609|GFAP|2670|glial fibrillary acidic protein##J04569|GFAP|2670|glial fibrillary acidic protein##BC013596|GFAP|2670|glial fibrillary acidic protein##AF419299|GFAP|2670|glial fibrillary acidic protein##BC041765|GFAP|2670|glial fibrillary acidic protein##AK128790|GFAP|2670|glial fibrillary acidic protein##AK098380|GFAP|2670|glial fibrillary acidic protein##AK098758|GFAP|2670|glial fibrillary acidic protein##AK222683|GFAP|2670|glial fibrillary acidic protein##AK295734|GFAP|2670|glial fibrillary acidic protein##AK296259|GFAP|2670|glial fibrillary acidic protein##AK303728|GFAP|2670|glial fibrillary acidic protein##S40719|GFAP|2670|glial fibrillary acidic protein##AK315398|GFAP|2670|glial fibrillary acidic protein##NM_001131019|GFAP|2670|glial fibrillary acidic protein##NM_001242376|GFAP|2670|glial fibrillary acidic protein##NM_002055|GFAP|2670|glial fibrillary acidic protein##AK290755|DCAKD|79877|dephospho-CoA kinase domain containing##NM_001128631|DCAKD|79877|dephospho-CoA kinase domain containing##AK026608|DCAKD|79877|dephospho-CoA kinase domain containing##BC006472|DCAKD|79877|dephospho-CoA kinase domain containing##BC006546|DCAKD|79877|dephospho-CoA kinase domain containing##NM_024819|DCAKD|79877|dephospho-CoA kinase domain containing##Y17208|NMT1|4836|N-myristoyltransferase 1##Y17209|NMT1|4836|N-myristoyltransferase 1	0.998733	CTCF.p2:7:0.999
chr22	39567112	39567292	reg1000697.p2	6.257	+	DQ064603 AB528611 EU446785 CU690844 BC051773 TSC_hg19_v1_chr22_-_39548584 NM_175709 AK124408	-18635	-	TSC_hg19_v1_chr22_-_39529023 BC128418	-38155	-	NM_001166002 NM_001166003 NM_001166004 NM_181773 BC069023 CR456481	-73932	+	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	69707	-	CR541807 CU013138 CU013426 AB590092 TSC_hg19_v1_chr22_-_39639984 CR456538 X02744	72823	-	NM_002608 X02811 TSC_hg19_v1_chr22_-_39640988 M12783	73805	-	DQ064603|CBX7|23492|chromobox homolog 7##EU446785|CBX7|23492|chromobox homolog 7##BC051773|CBX7|23492|chromobox homolog 7##NM_175709|CBX7|23492|chromobox homolog 7##BC128418|CBX7|23492|chromobox homolog 7##NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR541807|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013138|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013426|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR456538|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02744|PDGFB|5155|platelet-derived growth factor beta polypeptide##NM_002608|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02811|PDGFB|5155|platelet-derived growth factor beta polypeptide##M12783|PDGFB|5155|platelet-derived growth factor beta polypeptide	0.0	
chr3	134513993	134514149	reg1001144.p2	6.257	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-144226	-	AK023448 BC068997 TSC_hg19_v1_chr3_+_134205041 NM_025180 AK056465	-309047	+	TSC_hg19_v1_chr3_+_134204899 NM_001042400	-309187	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	80	+	TSC_hg19_v1_chr3_+_134514301 BC111744	230	+	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	1170460	+	BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##AK023448|CEP63|80254|centrosomal protein 63kDa##BC068997|CEP63|80254|centrosomal protein 63kDa##NM_025180|CEP63|80254|centrosomal protein 63kDa##AK056465|CEP63|80254|centrosomal protein 63kDa##NM_001042400|CEP63|80254|centrosomal protein 63kDa##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC111744|EPHB1|2047|EPH receptor B1##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.0	
chr7	73808110	73808264	reg1020852.p2	6.257	+	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	-104400	+	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	-139451	-	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	-139476	-	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	59977	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	60121	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	60248	+	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1	0.656663	CTCF.p2:0:0.657
chr19	4140481	4140601	reg1005886.p3	6.256	+	TSC_hg19_v1_chr19_-_4124145 BC000471 NM_030662	-16408	-	AB463893 DQ893601 DQ895060 L11285 BC018645 TSC_hg19_v1_chr19_-_4124114 BX538081	-16549	-	TSC_hg19_v1_chr19_-_4103205 AK093125	-37329	-	TSC_hg19_v1_chr19_+_4153636 AK313099 AB050902 AK172839 NM_032607 AB073612 BC101504 BC143609 BC143610 BC101508 EU446882	13126	+	TSC_hg19_v1_chr19_-_4182561 DQ896358 EU176413 AB528632 CR457200 CU678868 BC005026 BC000090 BC004218 AK299420 BC028220 AK293348 AK315048 AK301247 AK074810 AK225567 AF233396 NM_001193285 NM_016539	42004	-	NM_133475	42809	+	BC000471|MAP2K2|5605|mitogen-activated protein kinase kinase 2##NM_030662|MAP2K2|5605|mitogen-activated protein kinase kinase 2##DQ893601|MAP2K2|5605|mitogen-activated protein kinase kinase 2##DQ895060|MAP2K2|5605|mitogen-activated protein kinase kinase 2##L11285|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BC018645|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BX538081|MAP2K2|5605|mitogen-activated protein kinase kinase 2##AK093125|MAP2K2|5605|mitogen-activated protein kinase kinase 2##AK313099|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB050902|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AK172839|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##NM_032607|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB073612|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101504|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143609|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143610|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101508|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##EU446882|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##DQ896358|SIRT6|51548|sirtuin 6##EU176413|SIRT6|51548|sirtuin 6##CR457200|SIRT6|51548|sirtuin 6##BC005026|SIRT6|51548|sirtuin 6##BC004218|SIRT6|51548|sirtuin 6##AK299420|SIRT6|51548|sirtuin 6##BC028220|SIRT6|51548|sirtuin 6##AK293348|SIRT6|51548|sirtuin 6##AK315048|SIRT6|51548|sirtuin 6##AK301247|SIRT6|51548|sirtuin 6##AK074810|SIRT6|51548|sirtuin 6##AK225567|SIRT6|51548|sirtuin 6##AF233396|SIRT6|51548|sirtuin 6##NM_001193285|SIRT6|51548|sirtuin 6##NM_016539|SIRT6|51548|sirtuin 6##NM_133475|ANKRD24|170961|ankyrin repeat domain 24	0.45817	CTCF.p2:-12:0.458
chr19	45905694	45905796	reg1023046.p2	6.256	+	TSC_hg19_v1_chr19_-_45873851 NM_000400 NM_001130867	-31900	-	BC008346 TSC_hg19_v1_chr19_-_45873816 BC108255 AK303358 BC110522 BC110523	-32007	-	BC025318 NM_177417 BC062998 BC073841	-61738	+	BC032298 AY869712 BC014499 BC020259 NM_006663 TSC_hg19_v1_chr19_-_45908318	2568	-	NM_012099 U86751 BC054044 BC046141 BC108889	3838	+	AK130326 BC064913 TSC_hg19_v1_chr19_-_45909620 NM_001142502	3850	-	NM_000400|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##NM_001130867|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC008346|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC108255|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##AK303358|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC110522|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC110523|ERCC2|2068|excision repair cross-complementing rodent repair deficiency, complementation group 2##BC025318|KLC3|147700|kinesin light chain 3##NM_177417|KLC3|147700|kinesin light chain 3##BC062998|KLC3|147700|kinesin light chain 3##BC073841|KLC3|147700|kinesin light chain 3##BC032298|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##AY869712|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##BC014499|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##BC020259|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##NM_006663|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##NM_012099|CD3EAP|10849|CD3e molecule, epsilon associated protein##U86751|CD3EAP|10849|CD3e molecule, epsilon associated protein##BC054044|CD3EAP|10849|CD3e molecule, epsilon associated protein##BC046141|CD3EAP|10849|CD3e molecule, epsilon associated protein##BC108889|CD3EAP|10849|CD3e molecule, epsilon associated protein##AK130326|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##BC064913|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like##NM_001142502|PPP1R13L|10848|protein phosphatase 1, regulatory subunit 13 like	0.998969	CTCF.p2:11:0.999
chr10	30291475	30291582	reg1021942.p1	6.255	+	TSC_hg19_v1_chr10_-_30025865 AK307640	-265622	-	TSC_hg19_v1_chr10_-_30024866 AF051850 NM_003174	-266764	-	AF109135 NM_021738 TSC_hg19_v1_chr10_-_29923901	-367621	-	TSC_hg19_v1_chr10_-_30316350 BC047548	24903	-	TSC_hg19_v1_chr10_-_30348516 AK308850 NM_020848 BC071601	56966	-	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	346705	-	AK307640|SVIL|6840|supervillin##AF051850|SVIL|6840|supervillin##NM_003174|SVIL|6840|supervillin##AF109135|SVIL|6840|supervillin##NM_021738|SVIL|6840|supervillin##BC047548|KIAA1462|57608|KIAA1462##AK308850|KIAA1462|57608|KIAA1462##NM_020848|KIAA1462|57608|KIAA1462##BC071601|KIAA1462|57608|KIAA1462##AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase	0.89618	CTCF.p2:17:0.874
chr12	58377055	58377153	reg1020675.p2	6.255	+	BC012776 NM_033276 BC115381 BC115382 TSC_hg19_v1_chr12_+_58335454	-41644	+	TSC_hg19_v1_chr12_+_58335326 BC033881 AF078164	-41768	+	NM_005730	-136358	-	AK301162 AY358295 NM_001136051	936211	-	AY505340 BC126169 BC126171 BC143960 AY358288 NM_153377 TSC_hg19_v1_chr12_-_59314272	937073	-	AK292857 TSC_hg19_v1_chr12_-_59314301	937198	-	BC012776|XRCC6BP1|91419|XRCC6 binding protein 1##NM_033276|XRCC6BP1|91419|XRCC6 binding protein 1##BC115381|XRCC6BP1|91419|XRCC6 binding protein 1##BC115382|XRCC6BP1|91419|XRCC6 binding protein 1##BC033881|XRCC6BP1|91419|XRCC6 binding protein 1##AF078164|XRCC6BP1|91419|XRCC6 binding protein 1##NM_005730|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	0.919407	CTCF.p2:0:0.919
chr12	5854576	5854688	reg1020824.p1	6.255	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	-251294	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	-313356	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	-701513	+	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	199842	-	AJ272204 NM_020373	200765	-	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	379127	-	BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor	0.736585	CTCF.p2:-13:0.737
chr1	64370775	64370842	reg1039187.p1	6.255	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	-131149	+	NM_001172818 AK300100	-281915	+	AK293298 NM_001172819 AK298505	-311294	+	BC029895 NM_152489	298681	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	565710	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	839991	+	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_020925|CACHD1|57685|cache domain containing 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2	0.0	
chr21	45065518	45065644	reg1021749.p1	6.255	+	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	-218586	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	-219592	-	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-476407	+	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	13781	-	TSC_hg19_v1_chr21_+_45079444 BC028386 NM_015056 BC014005 AK056263 D80001 AB385292	13877	+	TSC_hg19_v1_chr21_+_45138985 BC005825 NM_003681	73398	+	AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein##BC028386|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##NM_015056|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##BC014005|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##AK056263|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##D80001|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##BC005825|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase##NM_003681|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase	0.0	
chr5	16552974	16553106	reg1023529.p1	6.255	+	NM_019000	-43934	-	TSC_hg19_v1_chr5_-_16465884 BC010545 BC008752 NM_033414 AY046059	-87164	-	NM_001102562	-373144	-	TSC_hg19_v1_chr5_-_16617097 BC053326 AK025808 NM_001034850	64085	-	TSC_hg19_v1_chr5_-_16738346 AK295736	185380	-	AK316138 TSC_hg19_v1_chr5_-_16742338	189297	-	NM_019000|FAM134B|54463|family with sequence similarity 134, member B##BC010545|ZNF622|90441|zinc finger protein 622##BC008752|ZNF622|90441|zinc finger protein 622##NM_033414|ZNF622|90441|zinc finger protein 622##AY046059|ZNF622|90441|zinc finger protein 622##NM_001102562|MARCH11|441061|membrane-associated ring finger (C3HC4) 11##BC053326|FAM134B|54463|family with sequence similarity 134, member B##AK025808|FAM134B|54463|family with sequence similarity 134, member B##NM_001034850|FAM134B|54463|family with sequence similarity 134, member B##AK295736|MYO10|4651|myosin X##AK316138|MYO10|4651|myosin X	0.0	
chr5	175433183	175433304	reg1026878.p1	6.255	+	NM_032361	-37699	-	TSC_hg19_v1_chr5_-_175395273 BC068499 BC066325 BC006849	-38091	-	TSC_hg19_v1_chr5_+_175308843 AL512758 AK126590	-124318	+	BC028606 NM_001079529	78635	+	TSC_hg19_v1_chr5_+_175665384 BC037298 BC066980 NM_198567 AK299336	232147	+	TSC_hg19_v1_chr5_-_175788768 BC006316 BC010448 BC012848 AK024675 AK225073 AK315428 BC017097 AL390217 BX648859 NM_001079684 NM_001079685 NM_020444	355520	-	NM_032361|THOC3|84321|THO complex 3##BC068499|THOC3|84321|THO complex 3##BC066325|THOC3|84321|THO complex 3##BC006849|THOC3|84321|THO complex 3##AL512758|CPLX2|10814|complexin 2##AK126590|CPLX2|10814|complexin 2##BC028606|FAM153B|202134|family with sequence similarity 153, member B##NM_001079529|FAM153B|202134|family with sequence similarity 153, member B##BC037298|C5orf25|375484|chromosome 5 open reading frame 25##BC066980|C5orf25|375484|chromosome 5 open reading frame 25##NM_198567|C5orf25|375484|chromosome 5 open reading frame 25##AK299336|C5orf25|375484|chromosome 5 open reading frame 25##BC006316|KIAA1191|57179|KIAA1191##BC010448|KIAA1191|57179|KIAA1191##BC012848|KIAA1191|57179|KIAA1191##AK315428|KIAA1191|57179|KIAA1191##BC017097|KIAA1191|57179|KIAA1191##AL390217|KIAA1191|57179|KIAA1191##BX648859|KIAA1191|57179|KIAA1191##NM_001079684|KIAA1191|57179|KIAA1191##NM_001079685|KIAA1191|57179|KIAA1191##NM_020444|KIAA1191|57179|KIAA1191	0.0	
chr1	156675825	156675954	reg1021272.p1	6.254	+	BT019827 CR450357 DQ892265 DQ896851 M68867 BC001109 AB593017 AK312007 TSC_hg19_v1_chr1_-_156675376 NM_001878 NM_001199723	-467	-	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	-28744	-	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	-63935	+	AY391837 AK022733 NM_030980	21779	-	TSC_hg19_v1_chr1_-_156698238 BC000575 AK095697	22338	-	TSC_hg19_v1_chr1_+_156698260 NM_001142560 NM_015997	22367	+	BT019827|CRABP2|1382|cellular retinoic acid binding protein 2##CR450357|CRABP2|1382|cellular retinoic acid binding protein 2##DQ892265|CRABP2|1382|cellular retinoic acid binding protein 2##DQ896851|CRABP2|1382|cellular retinoic acid binding protein 2##M68867|CRABP2|1382|cellular retinoic acid binding protein 2##BC001109|CRABP2|1382|cellular retinoic acid binding protein 2##AB593017|CRABP2|1382|cellular retinoic acid binding protein 2##AK312007|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001878|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001199723|CRABP2|1382|cellular retinoic acid binding protein 2##BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##AY391837|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK022733|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_030980|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##BC000575|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK095697|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_001142560|RRNAD1|51093|ribosomal RNA adenine dimethylase domain containing 1##NM_015997|RRNAD1|51093|ribosomal RNA adenine dimethylase domain containing 1	0.997485	CTCF.p2:34:0.997
chr16	27417080	27417247	reg1022952.p1	6.254	+	AK292663 NM_181078 NM_181079 AK312825	-3676	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-75819	+	TSC_hg19_v1_chr16_+_27325301 BC110343 AK223591 X52425	-91845	+	NM_021798 AY358826 AF254067	21441	+	TSC_hg19_v1_chr16_-_27561218 BX648143	144055	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	144068	-	AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BC110343|IL4R|3566|interleukin 4 receptor##AK223591|IL4R|3566|interleukin 4 receptor##X52425|IL4R|3566|interleukin 4 receptor##NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.0	
chr19	10602906	10603021	reg1023142.p2	6.254	+	TSC_hg19_v1_chr19_+_10563605 BC038234 NM_006202 BC019864	-39295	+	AF073745 NM_001111309	-59853	+	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	-61536	+	TSC_hg19_v1_chr19_-_10613392 BC002930 AF361886 D50922 NM_012289	10475	-	TSC_hg19_v1_chr19_-_10614033 NM_203500	10951	-	TSC_hg19_v1_chr19_-_10614085 AK056204	11199	-	BC038234|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_006202|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC019864|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AF073745|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111309|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC002930|KEAP1|9817|kelch-like ECH-associated protein 1##AF361886|KEAP1|9817|kelch-like ECH-associated protein 1##D50922|KEAP1|9817|kelch-like ECH-associated protein 1##NM_012289|KEAP1|9817|kelch-like ECH-associated protein 1##NM_203500|KEAP1|9817|kelch-like ECH-associated protein 1##AK056204|KEAP1|9817|kelch-like ECH-associated protein 1	1.151528	CTCF.p2:-19:0.964
chr3	124860842	124860992	reg1023901.p2	6.254	+	BC063528 TSC_hg19_v1_chr3_-_124842461	-18462	-	AB384586 NM_020733 TSC_hg19_v1_chr3_-_124774842	-86117	-	BC067235 TSC_hg19_v1_chr3_-_124732404	-128525	-	AF345197 HQ258349 BC126158 BC126160 AF390442 NM_001195483	69300	-	AK123001 TSC_hg19_v1_chr3_-_124931591 AX721165 AK131070 NM_024628	70668	-	AF039019 AL833616 AF432210 AJ236885 L04282 BC035591 BC018971 AK314203 TSC_hg19_v1_chr3_-_125094153 BC050260 NM_021964	233183	-	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)##BC067235|HEG1|57493|HEG homolog 1 (zebrafish)##AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AK123001|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_024628|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF039019|ZNF148|7707|zinc finger protein 148##AL833616|ZNF148|7707|zinc finger protein 148##AF432210|ZNF148|7707|zinc finger protein 148##AJ236885|ZNF148|7707|zinc finger protein 148##L04282|ZNF148|7707|zinc finger protein 148##BC035591|ZNF148|7707|zinc finger protein 148##BC018971|ZNF148|7707|zinc finger protein 148##AK314203|ZNF148|7707|zinc finger protein 148##BC050260|ZNF148|7707|zinc finger protein 148##NM_021964|ZNF148|7707|zinc finger protein 148	0.0	
chr6	150740286	150740416	reg1010047.p3	6.254	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	-50193	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-276110	+	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	-350138	-	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	180669	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	446481	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	446570	+	AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3##NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.453469	CTCF.p2:-3:0.453
chr11	585426	585600	reg1017958.p2	6.253	+	NM_020901 TSC_hg19_v1_chr11_+_576482 AB040975 BC146771 AK308541 BC136615 BC144293 BC144294 BC144295 BC112931	-9008	+	TSC_hg19_v1_chr11_-_575850 AK057794 AK123970	-9647	-	AK123483 TSC_hg19_v1_chr11_-_568468	-17069	-	AF076494 NM_004031	30175	-	U53830 U53831 U53832 U73036 TSC_hg19_v1_chr11_-_615951 AK303752	30423	-	NM_001572 NM_004029 TSC_hg19_v1_chr11_-_616001	30488	-	NM_020901|PHRF1|57661|PHD and ring finger domains 1##AB040975|PHRF1|57661|PHD and ring finger domains 1##BC146771|PHRF1|57661|PHD and ring finger domains 1##AK308541|PHRF1|57661|PHD and ring finger domains 1##BC136615|PHRF1|57661|PHD and ring finger domains 1##BC144293|PHRF1|57661|PHD and ring finger domains 1##BC144294|PHRF1|57661|PHD and ring finger domains 1##BC144295|PHRF1|57661|PHD and ring finger domains 1##BC112931|PHRF1|57661|PHD and ring finger domains 1##AK057794|LOC143666|143666|uncharacterized LOC143666##AK123970|LOC143666|143666|uncharacterized LOC143666##AK123483|MIR210HG|100506211|MIR210 host gene (non-protein coding)##AF076494|IRF7|3665|interferon regulatory factor 7##NM_004031|IRF7|3665|interferon regulatory factor 7##U53830|IRF7|3665|interferon regulatory factor 7##U53831|IRF7|3665|interferon regulatory factor 7##U53832|IRF7|3665|interferon regulatory factor 7##U73036|IRF7|3665|interferon regulatory factor 7##AK303752|IRF7|3665|interferon regulatory factor 7##NM_001572|IRF7|3665|interferon regulatory factor 7##NM_004029|IRF7|3665|interferon regulatory factor 7	0.0	
chr12	109247901	109248081	reg1023732.p1	6.253	+	AK095421 NM_001161331	-26665	-	TSC_hg19_v1_chr12_-_109125295 AK023205 AK223073 AK304839 AK311315 AK316065 AB030656 NM_014325	-122699	-	TSC_hg19_v1_chr12_-_109125284 BC002342 AB209909	-122711	-	AB072355 AB072356 TSC_hg19_v1_chr12_-_109251307	3299	-	TSC_hg19_v1_chr12_-_109251360 BC062341 NM_001161330 NM_018984	3431	-	NM_001917 AX741655 AX741656 AX741658 AX776478 AX776479 AX786386 AK312995 BX538210 BC029057 BC074770	25929	+	AK095421|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161331|SSH1|54434|slingshot homolog 1 (Drosophila)##AK023205|CORO1C|23603|coronin, actin binding protein, 1C##AK223073|CORO1C|23603|coronin, actin binding protein, 1C##AK304839|CORO1C|23603|coronin, actin binding protein, 1C##AK311315|CORO1C|23603|coronin, actin binding protein, 1C##AK316065|CORO1C|23603|coronin, actin binding protein, 1C##AB030656|CORO1C|23603|coronin, actin binding protein, 1C##NM_014325|CORO1C|23603|coronin, actin binding protein, 1C##BC002342|CORO1C|23603|coronin, actin binding protein, 1C##AB209909|CORO1C|23603|coronin, actin binding protein, 1C##AB072355|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072356|SSH1|54434|slingshot homolog 1 (Drosophila)##BC062341|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161330|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_018984|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001917|DAO|1610|D-amino-acid oxidase##AX741655|DAO|1610|D-amino-acid oxidase##AX741656|DAO|1610|D-amino-acid oxidase##AX741658|DAO|1610|D-amino-acid oxidase##AX776478|DAO|1610|D-amino-acid oxidase##AX776479|DAO|1610|D-amino-acid oxidase##AX786386|DAO|1610|D-amino-acid oxidase##AK312995|DAO|1610|D-amino-acid oxidase##BX538210|DAO|1610|D-amino-acid oxidase##BC029057|DAO|1610|D-amino-acid oxidase##BC074770|DAO|1610|D-amino-acid oxidase	0.761179	CTCF.p2:-11:0.761
chr19	59030939	59031119	reg1015479.p2	6.253	+	BC024738 NM_032792 TSC_hg19_v1_chr19_-_59030968	-76	-	AB527212 TSC_hg19_v1_chr19_-_59023360 AK298446 AK123036 NM_012254	-7652	-	AY280800 TSC_hg19_v1_chr19_+_58987792 AK000633 AY279351 NM_017908 BC017206 AK026153	-43246	+	TSC_hg19_v1_chr19_-_59031178 AK130056 AK027392	159	-	TSC_hg19_v1_chr19_+_59055826 AK225760 BC004978 NM_005762 BC052986	24803	+	TSC_hg19_v1_chr19_+_59055881 U95040	24859	+	BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45##NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45##AK298446|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##AK123036|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##NM_012254|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##AY280800|ZNF446|55663|zinc finger protein 446##AK000633|ZNF446|55663|zinc finger protein 446##AY279351|ZNF446|55663|zinc finger protein 446##NM_017908|ZNF446|55663|zinc finger protein 446##BC017206|ZNF446|55663|zinc finger protein 446##AK026153|ZNF446|55663|zinc finger protein 446##AK027392|ZBTB45|84878|zinc finger and BTB domain containing 45##AK225760|TRIM28|10155|tripartite motif containing 28##BC004978|TRIM28|10155|tripartite motif containing 28##NM_005762|TRIM28|10155|tripartite motif containing 28##BC052986|TRIM28|10155|tripartite motif containing 28##U95040|TRIM28|10155|tripartite motif containing 28	0.185286	
chr3	189229953	189230092	reg1022307.p1	6.253	+	AK125682 NM_198485 BC101550 BC101552	-340211	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-565052	+	NM_001167671 BC130584 BC144076	-1286788	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	119237	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	277496	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	608673	-	AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1	0.0	
chr9	140317762	140317867	reg1020171.p2	6.253	+	NM_017820 TSC_hg19_v1_chr9_-_140317724	-96	-	TSC_hg19_v1_chr9_-_140317652 BC033079 BC069205	-138	-	BC065002 TSC_hg19_v1_chr9_-_140317615 BC110879 AK000440 AK094438 BC039252 BC037355	-204	-	TSC_hg19_v1_chr9_+_140317844 BC041594 NM_006647 BC110840 AB095031 AY927790 AY927791 CU692004 AY255769 AK098341	88	+	TSC_hg19_v1_chr9_-_140335810 BC141810 AY359088 NM_001033113 NM_198585	18031	-	TSC_hg19_v1_chr9_-_140353612 BC110498	35818	-	NM_017820|EXD3|54932|exonuclease 3'-5' domain containing 3##BC033079|EXD3|54932|exonuclease 3'-5' domain containing 3##BC069205|EXD3|54932|exonuclease 3'-5' domain containing 3##BC065002|EXD3|54932|exonuclease 3'-5' domain containing 3##BC110879|EXD3|54932|exonuclease 3'-5' domain containing 3##AK000440|EXD3|54932|exonuclease 3'-5' domain containing 3##AK094438|EXD3|54932|exonuclease 3'-5' domain containing 3##BC039252|EXD3|54932|exonuclease 3'-5' domain containing 3##BC037355|EXD3|54932|exonuclease 3'-5' domain containing 3##BC041594|NOXA1|10811|NADPH oxidase activator 1##NM_006647|NOXA1|10811|NADPH oxidase activator 1##BC110840|NOXA1|10811|NADPH oxidase activator 1##AB095031|NOXA1|10811|NADPH oxidase activator 1##AY927790|NOXA1|10811|NADPH oxidase activator 1##AY927791|NOXA1|10811|NADPH oxidase activator 1##AY255769|NOXA1|10811|NADPH oxidase activator 1##AK098341|NOXA1|10811|NADPH oxidase activator 1##BC141810|ENTPD8|377841|ectonucleoside triphosphate diphosphohydrolase 8##AY359088|ENTPD8|377841|ectonucleoside triphosphate diphosphohydrolase 8##NM_001033113|ENTPD8|377841|ectonucleoside triphosphate diphosphohydrolase 8##NM_198585|ENTPD8|377841|ectonucleoside triphosphate diphosphohydrolase 8##BC110498|NELF|26012|nasal embryonic LHRH factor	0.9965	CTCF.p2:14:0.997
chr14	107094977	107095108	reg1022915.p1	6.252	+	AF460776 EF583680 DQ454729 DQ454436 HM995491 DQ454495 DQ454638 DQ454782 DQ523857 DQ454730 DQ454735 DQ454736 DQ454850 DQ454463 DQ454626 DQ454634 DQ454779 AY003758 DQ454909 AY003782 DQ454387 DQ454439 DQ454443 DQ454491 DQ454630 DQ454640 DQ454657 DQ454658 DQ454693 DQ454996 DQ523865 DQ523866 DQ523904 DQ523907 GU552723 GU552763 DQ454683 DQ454954 AY003756 AY003861 DQ454803 DQ454883 DQ454908 DQ454931 DQ454981 Z30558 Z30559 Z30575 Z30577 Z30579 Z30673 DQ454894 HM995480 DQ454567 DQ454586 DQ454595 DQ454611 DQ454623 DQ454649 DQ454661 DQ454790 DQ454858 DQ454930 DQ454940 DQ523860 M18514 AY003863 AY003854 DQ454390 DQ454444 DQ454650 DQ454684 DQ454709 DQ454717 DQ454721 DQ454733 DQ454737 DQ454855 DQ454887 DQ454933 DQ454936 DQ454963 DQ454984 DQ454994 DQ523863 DQ454447 DQ454504 DQ454539 DQ454596 DQ454609 DQ454613 DQ454619 DQ454633 DQ454656 DQ454672 DQ454720 DQ454886 DQ454942 DQ454972 DQ454977 HM116187 DQ454605 DQ454646 DQ454702 DQ454703 DQ454851 HM116123 HM116135 HM116139 HM116144 HM116147 HM116154 HM116217 AY003860 DQ454602 DQ454880 DQ454822 DQ454825 EF091925 EF175400 EF175422 EF175440 EF583671 EU667610 EU814956 GQ232848 GQ232850 GQ232880 DQ454435 EU099241 EU099155 EU099196 AY577297 AY393172 DQ523932 DQ524057 EU099215 EU099224 AM183980 AY393168 AY393171 AY393176 AY393177 AY393178 AM279541 AF103075 AF103349 AF103054 AY180386 AF103162 FJ385403 JN110682 JN110887 AF103140 FJ385332 FJ385336 FJ385376 FJ385404 FJ385416 FJ385417 FJ385421 GQ504863 L26904 AF103343 AF103091 EU620035 AF103271 EU146313 U00585 EU620063 DQ926547 AY062314 U00553 U00557 AF103164 AF103228 DQ005270 HM995488 AY671631 HM996467 AJ245067 DQ523945 DQ523951 DQ523954 DQ523969 DQ523970 DQ523977 DQ523979 DQ524002 DQ524011 DQ524015 DQ524019 DQ524040 DQ524042 DQ524043 DQ524052 DQ524055 DQ524072 DQ524087 DQ524090 DQ524092 DQ524099 DQ524100 DQ524104 DQ524108 DQ524110 DQ524124 DQ524133 AM233755 DQ926051 DQ926252 AB067262 AJ300799 AY671719 AY941873 AY944692 AY944703 AY944704 AY944722 DQ005289 DQ005293 DQ005305 EF178085 FJ385391 HM995323 HM995324 HM995327 HM995330 HM995345 HM995347 HM995388 HM995403 HM995478 HM995483 HM995484 HM995485 HM995486 HM995487 HM995498 HM995499 HM995500 HM995502 HM995534 HM995551 HM995556 HM995557 HM995559 HM995560 HM995932 HM995933 HM995957 HM995994 HM996010 HM996122 HM996155 HM996464 HM996496 AB063721 AB063723 AB063729 AB063744 AB063787 AB063920 AB066903 AB066912 AB066913 AB067270 AB067272 AB067275 AB067296 AF021963 AF035041 AF062230 AF174018 AF174072 AF174080 AF174097 AF174119 AJ006351 AJ239343 AJ244983 AJ245027 AJ413991 AJ413998 AJ413999 AJ574780 AM279612 AY345917 AY640510 AY670733 AY670744 AY670820 AY670910 AY670915 AY670930 AY670942 AY670967 AY670984 AY671004 AY671056 AY671062 AY671072 AY671075 AY671076 AY671082 AY671085 AY671088 AY671194 AY671221 AY671255 AY671326 AY671337 AY671343 AY671346 AY671353 AY671356 AY671359 AY671373 AY671376 AY671378 AY671394 AY671456 AY671457 AY671458 AY671459 AY671460 AY671463 AY671467 AY671470 AY671472 AY671473 AY671476 AY671485 AY671488 AY671493 AY671494 AY671575 AY671588 AY671589 AY671601 AY671606 AY671628 AY671645 AY671666 AY671667 AY671674 AY671692 AY671710 AY671715 AY671717 AY671759 AY866865 AY986386 AY986387 AY986388 AY986389 AY986390 DQ005263 DQ005287 DQ005288 DQ100795 DQ328873 DQ431484 DQ431485 DQ926085 DQ926130 DQ926178 DQ926219 DQ926256 DQ926258 DQ926290 DQ926310 DQ926368 DQ926395 DQ926514 DQ926572 DQ926640 DQ926644 EU794431 FJ385318 FJ456850 GU570380 GU570382 HQ378396 HQ689744 JF806450 L12189 L12197 L23516 L23517 L23563 S73508 U00486 U00493 U31937 U43927 U51549 U95241 U96283 X98749 Z70613 Z70615 Z70628 Z70629 Z70651 Z70652 Z70653 Z70658 Z74672 Z74674 Z74681 Z74682 Z74683 Z74684 Z74685 Z74686 Z74687 Z74688 Z74689 Z74690 DQ926105 AY686879 AY944715 DQ535399 DQ535425 DQ535434 DQ535441 DQ535468 DQ535469 DQ535474 EF177985 EF178038 EF178125 HM996104 HM996425 HM996431 HM996435 Z14199 Z75403 AY392942 AY393076 AY393081 AY393082 Z47242 AY671167 AF062106 AF062108 AF062109 AF062126 AF062129 AF062132 AF062144 AF062166 AF062185 AF062209 AF062228 AF062252 AF062266 AY671032 AY671186 AY671196 AY671241 AY671258 AY671290 AY671296 M88500 S46247 U44791 U86525 X52111 Z11958 Z47349 Z75395 M18518 BC066594 S50735 TSC_hg19_v1_chr14_-_107083721 AK097365 X67906 X69860 X69866 AK097362 BX248300 AK125079	-11465	-	DQ454429 DQ454922 HM116180 EF091913 EF175413 GQ232868 GQ232976 EF583666 EF407827 EF407822 AJ007320 AF308556 AF103132 HM774392 HQ703981 JN110710 JN111102 HM774550 AY393601 AY393649 AY393679 EU099114 EU099216 DQ100711 AB066834 AF174037 AY050706 DQ005304 FJ492918 HM994925 HQ689790 Z80842 DQ524125 DQ535395 HQ378413 DQ100675 HM996225 AB067078 AY866569 AY971062 DQ065681 DQ926239 EF028212 HM994895 HM994932 HM994933 HM994938 HM994946 HM994963 HM994965 HM995218 HM995258 HM995267 HM995314 HM996512 HM996546 AF021955 GU570262 AF062174 AF062225 AF062279 TSC_hg19_v1_chr14_-_107078867	-16317	-	AB063741 AY393018 AF062170 AY393124 Z47215 AK126281 TSC_hg19_v1_chr14_-_107066261	-28878	-	S76904 AM279575 EU619960 JN110911 JN111008 HM774600 HM774602 AF103144 AF103285 AY866748 AY866803 DQ187673 DQ187733 DQ322974 DQ840851 DQ840858 DQ840864 AF006522 AF233250 AF471440 EF177980 EU835549 AB063812 AJ399808 AJ579268 DQ205169 DQ535364 DQ535448 DQ926460 Z98683 Z98702 AJ519260 AJ519262 AJ519304 AY392915 AF062171 TSC_hg19_v1_chr14_-_107099662 AK097355 AK097366 AK093636 AK097572 AX748235	4481	-	DQ454926 GU552751 DQ523845 DQ454743 DQ454741 FJ873884 FJ873949 FJ874082 DQ454745 AY003790 EU350425 EU667608 EF407835 DQ454756 DQ454758 DQ322814 AF343367 AF343413 AF103266 AJ007443 AF103288 FJ385341 AF103034 AF103338 AF062236 JN110970 L03820 HM774324 HM774398 HM774726 HM774904 HM774928 L33041 HM775043 AF408742 AF485449 AF078936 AF485451 AF485453 AF485455 EF633815 DQ524036 DQ524153 DQ926062 HM995709 HM995710 HM995711 HM995712 HM995713 HM995863 HM995864 HM995866 DQ322813 HM996268 AJ245306 AY044149 DQ100802 DQ100910 DQ926129 AB063797 AB063898 AB063899 AF022008 AF099199 AF398961 AF471517 AF471518 AF471519 AF471520 AJ224899 AJ399811 AY554175 AY640527 DQ065678 DQ535356 DQ779565 DQ779566 FJ385288 FN563805 FN563806 FN563810 FN563812 FN563827 FN563828 HQ689733 JF806286 X77017 L48239 AY392926 AY393064 AY452138 X65898 X81752 X81753 BC073782 AF067420 TSC_hg19_v1_chr14_-_107114275 AK097071	19067	-	AF103081 JN110643 JN110687 GQ504895 GQ504960 HM774028 HM774358 HM774582 HM774889 X98961 AF165107 AY423163 AF485471 AF485473 AJ306675 AY423172 FN563800 EF633801 HM994977 HM994995 HM995120 HM995247 HM995290 HM995392 HM995519 HM995754 HM995991 HM996039 HM996369 AY866776 DQ322973 DQ926438 AF471404 AJ245345 AJ401162 AM279604 AY866777 DQ100932 DQ100975 DQ926053 DQ926476 GU570357 L19914 Z96976 AB067024 AB067127 AB363182 AB373619 AF231404 AF471217 AF471316 AF471319 AF471331 AF471353 AJ519231 AJ556646 AJ556650 AY640562 AY866705 AY866733 AY971141 DQ065617 DQ065721 DQ100842 DQ535272 DQ535332 DQ926279 EF633803 EF633809 EF633824 EF633825 FJ385293 FJ492933 FN563769 FN563801 FN563814 FN563817 FN563830 FN563831 L38018 Y08405 Y08406 Z96975 Z98724 AJ519258 AJ519228 AJ519314 AJ519323 AJ519243 AJ519280 AJ519310 AJ519335 AJ519268 AJ519313 X62126 TSC_hg19_v1_chr14_-_107122620	27447	-	BC066594|IGH@|3492|immunoglobulin heavy locus##AK097365|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097362|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125079|IGH@|3492|immunoglobulin heavy locus##AK126281|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK097366|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC073782|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF067420|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.991338	CTCF.p2:-8:0.991
chr15	75335579	75335760	reg1002775.p2	6.252	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-19688	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-19741	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-47762	+	AK128205 TSC_hg19_v1_chr15_+_75491259	155577	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	158543	+	BC110367 TSC_hg19_v1_chr15_+_75494233	158564	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chr16	32435245	32435369	reg1027175.p1	6.252	+	AB023508 AB023509 BC096700 BC099842 NM_001243722 AK312220 CR541650	-170649	+	TSC_hg19_v1_chr16_-_32199418 AK300387	-235888	-	TSC_hg19_v1_chr16_+_31885159 BC036367 BC127088 BC127089 AK292573	-550103	+	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	252126	-	AL133588 NM_016212	252745	-	AK300387 TSC_hg19_v1_chr16_+_32752635	317329	+	AB023508|TP53TG3|24150|TP53 target 3##AB023509|TP53TG3|24150|TP53 target 3##BC096700|TP53TG3|24150|TP53 target 3##BC099842|TP53TG3|24150|TP53 target 3##NM_001243722|LOC729264|729264|TP53-target gene 3 protein-like##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##BC036367|ZNF267|10308|zinc finger protein 267##BC127088|ZNF267|10308|zinc finger protein 267##BC127089|ZNF267|10308|zinc finger protein 267##AK292573|ZNF267|10308|zinc finger protein 267##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene	0.0	
chr2	128615817	128615946	reg1023466.p2	6.252	+	TSC_hg19_v1_chr2_-_128615717 BC093795 NM_004805 BC093797	-156	-	TSC_hg19_v1_chr2_-_128615699 U85510 BC017205	-184	-	AB464041 TSC_hg19_v1_chr2_-_128615689	-200	-	BC016181 NM_031445	26552	-	BC078174 AK304145 NM_001199140 TSC_hg19_v1_chr2_-_128643522	27636	-	TSC_hg19_v1_chr2_+_128643535 AK025716	27671	+	BC093795|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D##NM_004805|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D##BC093797|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D##U85510|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D##BC017205|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D##BC016181|AMMECR1L|83607|AMME chromosomal region gene 1-like##NM_031445|AMMECR1L|83607|AMME chromosomal region gene 1-like##BC078174|AMMECR1L|83607|AMME chromosomal region gene 1-like##AK304145|AMMECR1L|83607|AMME chromosomal region gene 1-like##NM_001199140|AMMECR1L|83607|AMME chromosomal region gene 1-like	0.051071	
chr6	99782540	99782653	reg1022754.p1	6.252	+	TSC_hg19_v1_chr6_-_99395817 AK313076 BC055010 BC039819 NM_012160	-386769	-	TSC_hg19_v1_chr6_-_99395800 BC091484 BC032641	-386807	-	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	-499924	+	BC004869 BC011583 NM_032511	14934	-	AF193016 BC015634 BC001534 BC063463 CU687730 AB590714 AF351615 AK056955 AL136726 NM_017421	59457	-	AF314185 TSC_hg19_v1_chr6_-_99849313 AL080186	66695	-	AK313076|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC055010|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC039819|FBXL4|26235|F-box and leucine-rich repeat protein 4##NM_012160|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC091484|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC032641|FBXL4|26235|F-box and leucine-rich repeat protein 4##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2##BC004869|C6orf168|84553|chromosome 6 open reading frame 168##BC011583|C6orf168|84553|chromosome 6 open reading frame 168##NM_032511|C6orf168|84553|chromosome 6 open reading frame 168##AF193016|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC015634|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC001534|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC063463|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AF351615|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AK056955|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AL136726|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##NM_017421|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AF314185|PNISR|25957|PNN-interacting serine/arginine-rich protein##AL080186|PNISR|25957|PNN-interacting serine/arginine-rich protein	0.997541	CTCF.p2:-1:0.998
chr8	11754866	11755047	reg1020475.p2	6.252	+	TSC_hg19_v1_chr8_-_11725628 NM_001908 NM_147780 NM_147781 NM_147782 NM_147783	-29258	-	TSC_hg19_v1_chr8_-_11725624 AK075393	-29332	-	AK092070 AK130184 AK290239 AK297687 BC095408 TSC_hg19_v1_chr8_-_11725597 AK296845 BX647952	-29359	-	AY621333 DQ012026 NM_001033018	77151	-	AY621332 DQ012025 NM_001033017	84873	+	AY621331 DQ012024 NM_001033019 BC130461 BC130463	98833	-	NM_001908|CTSB|1508|cathepsin B##NM_147780|CTSB|1508|cathepsin B##NM_147781|CTSB|1508|cathepsin B##NM_147782|CTSB|1508|cathepsin B##NM_147783|CTSB|1508|cathepsin B##AK075393|CTSB|1508|cathepsin B##AK092070|CTSB|1508|cathepsin B##AK130184|CTSB|1508|cathepsin B##AK290239|CTSB|1508|cathepsin B##AK297687|CTSB|1508|cathepsin B##BC095408|CTSB|1508|cathepsin B##AK296845|CTSB|1508|cathepsin B##BX647952|CTSB|1508|cathepsin B##AY621333|DEFB136|613210|defensin, beta 136##DQ012026|DEFB136|613210|defensin, beta 136##NM_001033018|DEFB136|613210|defensin, beta 136##AY621332|DEFB135|613209|defensin, beta 135##DQ012025|DEFB135|613209|defensin, beta 135##NM_001033017|DEFB135|613209|defensin, beta 135##AY621331|DEFB134|613211|defensin, beta 134##DQ012024|DEFB134|613211|defensin, beta 134##NM_001033019|DEFB134|613211|defensin, beta 134##BC130461|DEFB134|613211|defensin, beta 134##BC130463|DEFB134|613211|defensin, beta 134	0.0	
chr9	87612528	87612636	reg1022465.p1	6.252	+	U12140 TSC_hg19_v1_chr9_+_87285349	-327250	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-327830	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-327886	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	744289	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	943492	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	943596	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.998735	CTCF.p2:-5:0.999
chr10	71456004	71456100	reg1019136.p1	6.251	+	NM_145306 BC013587	-66045	+	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	-122952	-	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	-244719	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	105605	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	105637	+	TSC_hg19_v1_chr10_+_71562275 M59217	106239	+	NM_145306|C10orf35|219738|chromosome 10 open reading frame 35##BC013587|C10orf35|219738|chromosome 10 open reading frame 35##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##M59217|COL13A1|1305|collagen, type XIII, alpha 1	0.498238	CTCF.p2:19:0.498
chr12	49690458	49690549	reg1020943.p1	6.251	+	NM_006262 TSC_hg19_v1_chr12_+_49688929 BC032703 AB528454 CU689492 DQ893358 DQ896677	-1558	+	TSC_hg19_v1_chr12_+_49658867 BC011790 BC004949 BC033064 BC051297 BC019298 BC021088	-31619	+	TSC_hg19_v1_chr12_+_49658864 D28390 AK223024 BC005946 NM_032704	-31640	+	NM_001100620 NM_005480 TSC_hg19_v1_chr12_+_49717037 AK315211 AK296811 AK309716 AK310709 AK299302 BC032583 BC018627 BC011597	26533	+	BC110812 AF466366 NM_001008223	40460	-	TSC_hg19_v1_chr12_+_49740718 AK055747	50200	+	NM_006262|PRPH|5630|peripherin##BC032703|PRPH|5630|peripherin##DQ893358|PRPH|5630|peripherin##DQ896677|PRPH|5630|peripherin##BC011790|TUBA1C|84790|tubulin, alpha 1c##BC004949|TUBA1C|84790|tubulin, alpha 1c##BC033064|TUBA1C|84790|tubulin, alpha 1c##BC051297|TUBA1C|84790|tubulin, alpha 1c##BC019298|TUBA1C|84790|tubulin, alpha 1c##BC021088|TUBA1C|84790|tubulin, alpha 1c##D28390|TUBA1C|84790|tubulin, alpha 1c##AK223024|TUBA1C|84790|tubulin, alpha 1c##BC005946|TUBA1C|84790|tubulin, alpha 1c##NM_032704|TUBA1C|84790|tubulin, alpha 1c##NM_001100620|TROAP|10024|trophinin associated protein (tastin)##NM_005480|TROAP|10024|trophinin associated protein (tastin)##AK315211|TROAP|10024|trophinin associated protein (tastin)##AK296811|TROAP|10024|trophinin associated protein (tastin)##AK309716|TROAP|10024|trophinin associated protein (tastin)##AK310709|TROAP|10024|trophinin associated protein (tastin)##AK299302|TROAP|10024|trophinin associated protein (tastin)##BC032583|TROAP|10024|trophinin associated protein (tastin)##BC018627|TROAP|10024|trophinin associated protein (tastin)##BC011597|TROAP|10024|trophinin associated protein (tastin)##BC110812|C1QL4|338761|complement component 1, q subcomponent-like 4##AF466366|C1QL4|338761|complement component 1, q subcomponent-like 4##NM_001008223|C1QL4|338761|complement component 1, q subcomponent-like 4##AK055747|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22	1.09324	CTCF.p2:-28:0.987
chr19	48697692	48697808	reg1022171.p2	6.251	+	TSC_hg19_v1_chr19_+_48673949 BC043386	-23797	+	M36067 NM_000234 TSC_hg19_v1_chr19_-_48673602 AK314210 AK297296 AK303644 AB208791 AK225863 AK300370	-24169	-	AF058921 BC017956 AK022440 TSC_hg19_v1_chr19_-_48614075 AF065214 BC063416 AK314524 AK295400 NM_001159322 NM_001159323 NM_003706	-83690	-	CU691176 EU118120 EU118121 NM_001184900	46547	-	AB023172 AF322184 AF511652 TSC_hg19_v1_chr19_-_48753084 BC041697 BC045539 AK302327 AK311079 AK297045 BX648568 AK297069 NM_001184901 NM_001184903 NM_014959	55274	-	AK125548 TSC_hg19_v1_chr19_+_48758936 BC060888 BC008448 BC033836	61199	+	BC043386|C19orf68|374920|chromosome 19 open reading frame 68##M36067|LIG1|3978|ligase I, DNA, ATP-dependent##NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent##AK314210|LIG1|3978|ligase I, DNA, ATP-dependent##AK297296|LIG1|3978|ligase I, DNA, ATP-dependent##AK303644|LIG1|3978|ligase I, DNA, ATP-dependent##AB208791|LIG1|3978|ligase I, DNA, ATP-dependent##AK225863|LIG1|3978|ligase I, DNA, ATP-dependent##AK300370|LIG1|3978|ligase I, DNA, ATP-dependent##AF058921|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC017956|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK022440|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AF065214|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC063416|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK314524|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK295400|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159322|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159323|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_003706|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##EU118120|CARD8|22900|caspase recruitment domain family, member 8##EU118121|CARD8|22900|caspase recruitment domain family, member 8##NM_001184900|CARD8|22900|caspase recruitment domain family, member 8##AB023172|CARD8|22900|caspase recruitment domain family, member 8##AF322184|CARD8|22900|caspase recruitment domain family, member 8##AF511652|CARD8|22900|caspase recruitment domain family, member 8##BC041697|CARD8|22900|caspase recruitment domain family, member 8##BC045539|CARD8|22900|caspase recruitment domain family, member 8##AK302327|CARD8|22900|caspase recruitment domain family, member 8##AK311079|CARD8|22900|caspase recruitment domain family, member 8##AK297045|CARD8|22900|caspase recruitment domain family, member 8##BX648568|CARD8|22900|caspase recruitment domain family, member 8##AK297069|CARD8|22900|caspase recruitment domain family, member 8##NM_001184901|CARD8|22900|caspase recruitment domain family, member 8##NM_001184903|CARD8|22900|caspase recruitment domain family, member 8##NM_014959|CARD8|22900|caspase recruitment domain family, member 8##AK125548|LOC100505812|100505812|uncharacterized LOC100505812##BC060888|LOC100505812|100505812|uncharacterized LOC100505812	0.86993	CTCF.p2:13:0.870
chr20	61071633	61071713	reg1020724.p1	6.251	+	BC047790 NM_080473 TSC_hg19_v1_chr20_-_61051052	-20635	-	AK074919 TSC_hg19_v1_chr20_-_61002592 AK290299 NM_080833	-69065	-	TSC_hg19_v1_chr20_-_60982342 NM_031215	-89329	-	AK056985 NM_178463	75986	+	TSC_hg19_v1_chr20_+_61147924 BC110595	76281	+	TSC_hg19_v1_chr20_+_61273818 NM_016354	202130	+	BC047790|GATA5|140628|GATA binding protein 5##NM_080473|GATA5|140628|GATA binding protein 5##AK074919|C20orf151|140893|chromosome 20 open reading frame 151##AK290299|C20orf151|140893|chromosome 20 open reading frame 151##NM_080833|C20orf151|140893|chromosome 20 open reading frame 151##NM_031215|CABLES2|81928|Cdk5 and Abl enzyme substrate 2##AK056985|C20orf166|128826|chromosome 20 open reading frame 166##NM_178463|C20orf166|128826|chromosome 20 open reading frame 166##BC110595|C20orf166|128826|chromosome 20 open reading frame 166##NM_016354|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1	0.110503	
chr3	111410283	111410398	reg1018401.p1	6.251	+	AK056141 NM_001185106 NM_153268 TSC_hg19_v1_chr3_+_111393527	-16815	+	NM_024508	-96159	-	AK290719 AK315237 TSC_hg19_v1_chr3_+_111261063 AL833681 CU676690	-149273	+	AK296841 NM_001134437 TSC_hg19_v1_chr3_+_111451348 CR749654 AK307491	41005	+	NM_001134438 NM_145753 AK096151 TSC_hg19_v1_chr3_+_111578114 AK315050	167731	+	TSC_hg19_v1_chr3_+_111578136 BC069194	167797	+	AK056141|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_001185106|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_153268|PLCXD2|257068|phosphatidylinositol-specific phospholipase C, X domain containing 2##NM_024508|ZBED2|79413|zinc finger, BED-type containing 2##AK290719|CD96|10225|CD96 molecule##AK315237|CD96|10225|CD96 molecule##AL833681|CD96|10225|CD96 molecule##AK296841|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001134437|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##CR749654|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK307491|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001134438|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_145753|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK096151|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK315050|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##BC069194|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2	0.423306	CTCF.p2:7:0.423
chr7	21547363	21547516	reg1022998.p2	6.251	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-79115	+	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	-79620	+	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	-720905	-	AJ320497 NM_003777	35393	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	438043	-	AL833195 NM_012294	849082	-	AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5	0.963644	CTCF.p2:-7:0.964
chr15	88993495	88993632	reg1015276.p1	6.250	+	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	-193597	-	NM_152336	-2308322	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-2655368	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	17065	-	AB049944 NM_022839 NM_176805	17120	+	TSC_hg19_v1_chr15_+_89010935 BC032378 BC012489 AK027059 AK026165 AK222933 AK315407 AK223152 BC000200 CU680342 CU689362 DQ891586 DQ894780 BC009451	17363	+	NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11##BC032378|MRPS11|64963|mitochondrial ribosomal protein S11##BC012489|MRPS11|64963|mitochondrial ribosomal protein S11##AK027059|MRPS11|64963|mitochondrial ribosomal protein S11##AK026165|MRPS11|64963|mitochondrial ribosomal protein S11##AK222933|MRPS11|64963|mitochondrial ribosomal protein S11##AK315407|MRPS11|64963|mitochondrial ribosomal protein S11##AK223152|MRPS11|64963|mitochondrial ribosomal protein S11##BC000200|MRPS11|64963|mitochondrial ribosomal protein S11##DQ891586|MRPS11|64963|mitochondrial ribosomal protein S11##DQ894780|MRPS11|64963|mitochondrial ribosomal protein S11##BC009451|MRPS11|64963|mitochondrial ribosomal protein S11	0.305349	CTCF.p2:44:0.305
chr3	55519472	55519652	reg1000857.p2	6.250	+	AK290869 TSC_hg19_v1_chr3_-_55515412	-4154	-	TSC_hg19_v1_chr3_-_55515377 L20861	-4187	-	TSC_hg19_v1_chr3_-_55514935 CU687936 AB590996 BC074783	-4618	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	1770	-	TSC_hg19_v1_chr3_-_55521567 AK090582	2056	-	BC111550 BC112391 AB002376 NM_015576	982815	-	AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##L20861|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2	0.0	
chrX	38513665	38513776	reg1019218.p2	6.250	+	TSC_hg19_v1_chrX_+_38420794 NM_004615 AB062057 L10373 BC018036 AK293534 AK293178 AK293552 AK312343 D10653 CU676142 DQ892093 DQ895571 D29808 AB102665	-92968	+	BC107153 BC107154 NM_000531 BC114496 AK292757 K02100 BC074745	-301896	+	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	-326925	-	TSC_hg19_v1_chrX_+_38660678 NM_001098790 NM_001098791	146948	+	TSC_hg19_v1_chrX_+_38660711 BC019332	146986	+	BC008908 NM_021242	149352	+	NM_004615|TSPAN7|7102|tetraspanin 7##AB062057|TSPAN7|7102|tetraspanin 7##L10373|TSPAN7|7102|tetraspanin 7##BC018036|TSPAN7|7102|tetraspanin 7##AK293534|TSPAN7|7102|tetraspanin 7##AK293178|TSPAN7|7102|tetraspanin 7##AK293552|TSPAN7|7102|tetraspanin 7##AK312343|TSPAN7|7102|tetraspanin 7##D10653|TSPAN7|7102|tetraspanin 7##DQ892093|TSPAN7|7102|tetraspanin 7##DQ895571|TSPAN7|7102|tetraspanin 7##D29808|TSPAN7|7102|tetraspanin 7##AB102665|TSPAN7|7102|tetraspanin 7##BC107153|OTC|5009|ornithine carbamoyltransferase##BC107154|OTC|5009|ornithine carbamoyltransferase##NM_000531|OTC|5009|ornithine carbamoyltransferase##BC114496|OTC|5009|ornithine carbamoyltransferase##AK292757|OTC|5009|ornithine carbamoyltransferase##K02100|OTC|5009|ornithine carbamoyltransferase##BC074745|OTC|5009|ornithine carbamoyltransferase##DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001098790|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_001098791|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC019332|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))	0.033668	
chr8	120886764	120886922	reg1024035.p1	6.249	+	NM_022783 TSC_hg19_v1_chr8_+_120885965 AK315175 AK225168 AK297822 AL136678 AK225675 BC024746 AK022490 BC012040 AM392576 AM393333 AB527130 AK023916	-839	+	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	-18729	-	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	-41766	-	TSC_hg19_v1_chr8_+_121137341 NM_021110 Y11709 AK293080 AK307716 AK311498	250512	+	CU692406 DQ893117 DQ893487 DQ896395 AK307322 TSC_hg19_v1_chr8_-_121457370 AB049640 AF112214 BC009190	570512	-	TSC_hg19_v1_chr8_-_121457391 AK311924	570550	-	NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_021110|COL14A1|7373|collagen, type XIV, alpha 1##Y11709|COL14A1|7373|collagen, type XIV, alpha 1##AK293080|COL14A1|7373|collagen, type XIV, alpha 1##AK307716|COL14A1|7373|collagen, type XIV, alpha 1##AK311498|COL14A1|7373|collagen, type XIV, alpha 1##DQ893117|MRPL13|28998|mitochondrial ribosomal protein L13##DQ893487|MRPL13|28998|mitochondrial ribosomal protein L13##DQ896395|MRPL13|28998|mitochondrial ribosomal protein L13##AK307322|MRPL13|28998|mitochondrial ribosomal protein L13##AB049640|MRPL13|28998|mitochondrial ribosomal protein L13##AF112214|MRPL13|28998|mitochondrial ribosomal protein L13##BC009190|MRPL13|28998|mitochondrial ribosomal protein L13##AK311924|MRPL13|28998|mitochondrial ribosomal protein L13	0.111492	
chr10	37178070	37178162	reg1017456.p1	6.248	+	AB587328 AB043703 NM_031866	-1247757	-	AK074504 NM_153368	-1283779	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	-1552322	+	AF269087 NM_052997	236668	+	NM_001190489	713742	-	BC132915 BC132917 BC110869 BC021819 AJ491695 AJ492196 NM_021045 TSC_hg19_v1_chr10_-_38146539	968302	-	AB043703|FZD8|8325|frizzled family receptor 8##NM_031866|FZD8|8325|frizzled family receptor 8##AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AF269087|ANKRD30A|91074|ankyrin repeat domain 30A##NM_052997|ANKRD30A|91074|ankyrin repeat domain 30A##NM_001190489|MTRNR2L7|100288485|MT-RNR2-like 7##BC132915|ZNF248|57209|zinc finger protein 248##BC132917|ZNF248|57209|zinc finger protein 248##BC110869|ZNF248|57209|zinc finger protein 248##BC021819|ZNF248|57209|zinc finger protein 248##AJ491695|ZNF248|57209|zinc finger protein 248##AJ492196|ZNF248|57209|zinc finger protein 248##NM_021045|ZNF248|57209|zinc finger protein 248	0.998356	CTCF.p2:-16:0.998
chr16	67213734	67213846	reg1021144.p2	6.248	+	NM_003946 NM_001185057 AF043244 TSC_hg19_v1_chr16_+_67207847 AK314899 BC012798 AF064600 AF064599	-5961	+	NM_001185058 AK294145 AK092623 AX747633	-9363	+	TSC_hg19_v1_chr16_+_67198690 AK225152 AK296210 AB463724 AB029348 D87673	-15094	+	TSC_hg19_v1_chr16_-_67217476 AK094787 AK096855 BC080183	3651	-	TSC_hg19_v1_chr16_-_67217867 AL834156 NM_001040715	4072	-	AK092858 AX747772 BC034287 AK292004 AK092906 AX747800 AK300915 AY255669 NM_178516	10262	-	NM_003946|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##NM_001185057|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AF043244|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AK314899|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##BC012798|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AF064600|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AF064599|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##NM_001185058|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AK294145|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AK092623|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AK225152|HSF4|3299|heat shock transcription factor 4##AK296210|HSF4|3299|heat shock transcription factor 4##AB029348|HSF4|3299|heat shock transcription factor 4##D87673|HSF4|3299|heat shock transcription factor 4##AK094787|KIAA0895L|653319|KIAA0895-like##AK096855|KIAA0895L|653319|KIAA0895-like##BC080183|KIAA0895L|653319|KIAA0895-like##AL834156|KIAA0895L|653319|KIAA0895-like##NM_001040715|KIAA0895L|653319|KIAA0895-like##AK092858|EXOC3L1|283849|exocyst complex component 3-like 1##BC034287|EXOC3L1|283849|exocyst complex component 3-like 1##AK292004|EXOC3L1|283849|exocyst complex component 3-like 1##AK092906|EXOC3L1|283849|exocyst complex component 3-like 1##AK300915|EXOC3L1|283849|exocyst complex component 3-like 1##NM_178516|EXOC3L1|283849|exocyst complex component 3-like 1	0.829518	CTCF.p2:4:0.830
chr19	14982569	14982708	reg1022614.p1	6.248	+	NM_001005190	-29950	-	NM_017506	-43363	-	NM_198944 HQ258391 BC117212	-71654	-	HQ258148 NM_030901 BC101587 BC117357	9576	-	AB463980 NM_012377 BC110063	69661	+	NM_005071 U18244	101091	-	NM_001005190|OR7A10|390892|olfactory receptor, family 7, subfamily A, member 10##NM_017506|OR7A5|26659|olfactory receptor, family 7, subfamily A, member 5##NM_198944|OR7C1|26664|olfactory receptor, family 7, subfamily C, member 1##HQ258391|OR7C1|26664|olfactory receptor, family 7, subfamily C, member 1##BC117212|OR7C1|26664|olfactory receptor, family 7, subfamily C, member 1##HQ258148|OR7A17|26333|olfactory receptor, family 7, subfamily A, member 17##NM_030901|OR7A17|26333|olfactory receptor, family 7, subfamily A, member 17##BC101587|OR7A17|26333|olfactory receptor, family 7, subfamily A, member 17##BC117357|OR7A17|26333|olfactory receptor, family 7, subfamily A, member 17##NM_012377|OR7C2|26658|olfactory receptor, family 7, subfamily C, member 2##BC110063|OR7C2|26658|olfactory receptor, family 7, subfamily C, member 2##NM_005071|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##U18244|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6	0.998418	CTCF.p2:-5:0.998
chr4	185231573	185231706	reg1022750.p1	6.248	+	BC035035 AY358676 AK057370 NM_153343	-92574	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-403728	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-403819	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	164042	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	338962	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	339194	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.928531	CTCF.p2:-13:0.929
chr1	13460229	13460339	reg1023187.p1	6.247	+	NM_001024661 NM_001099854	-7629	-	AK124292 NM_001010890 NM_001098376 BC101343 BC137391 BC171794	-39102	+	BC140755 NM_001012276	-69529	-	NM_001099790 NM_001099850	17284	-	NM_001045480 BC144662 BC146858	34971	+	NM_001099852	55781	+	NM_001024661|PRAMEF13|400736|PRAME family member 13##NM_001099854|PRAMEF14|729528|PRAME family member 14##AK124292|PRAMEF9|343070|PRAME family member 9##NM_001010890|PRAMEF9|343070|PRAME family member 9##NM_001098376|PRAMEF15|653619|PRAME family member 15##BC101343|PRAMEF9|343070|PRAME family member 9##BC137391|PRAMEF9|343070|PRAME family member 9##BC171794|PRAMEF9|343070|PRAME family member 9##BC140755|PRAMEF7|441871|PRAME family member 7##NM_001012276|PRAMEF8|391002|PRAME family member 8##NM_001099790|PRAMEF19|645414|PRAME family member 19##NM_001099850|PRAMEF18|391003|PRAME family member 18##NM_001045480|PRAMEF16|654348|PRAME family member 16##BC144662|PRAMEF17|391004|PRAME family member 17##BC146858|PRAMEF17|391004|PRAME family member 17##NM_001099852|PRAMEF20|645425|PRAME family member 20	0.956843	CTCF.p2:4:0.957
chr19	4233460	4233604	reg1021276.p1	6.247	+	BC015364 L08187 NM_005755 BC046112 AB528398 DQ891589 EU176581 CU677281	-4012	+	NM_133475	-50182	+	TSC_hg19_v1_chr19_-_4182561 DQ896358 EU176413 AB528632 CR457200 CU678868 BC005026 BC000090 BC004218 AK299420 BC028220 AK293348 AK315048 AK301247 AK074810 AK225567 AF233396 NM_001193285 NM_016539	-50987	-	TSC_hg19_v1_chr19_+_4247086 AK001236 BC000561 AK023988 NM_018074 AF091080	13558	+	AK056268 NM_020209	45065	+	HQ452865 HQ452866 AY358964 BC015655 NM_001169126 NM_144615	68872	-	BC015364|EBI3|10148|Epstein-Barr virus induced 3##L08187|EBI3|10148|Epstein-Barr virus induced 3##NM_005755|EBI3|10148|Epstein-Barr virus induced 3##BC046112|EBI3|10148|Epstein-Barr virus induced 3##DQ891589|EBI3|10148|Epstein-Barr virus induced 3##EU176581|EBI3|10148|Epstein-Barr virus induced 3##NM_133475|ANKRD24|170961|ankyrin repeat domain 24##DQ896358|SIRT6|51548|sirtuin 6##EU176413|SIRT6|51548|sirtuin 6##CR457200|SIRT6|51548|sirtuin 6##BC005026|SIRT6|51548|sirtuin 6##BC004218|SIRT6|51548|sirtuin 6##AK299420|SIRT6|51548|sirtuin 6##BC028220|SIRT6|51548|sirtuin 6##AK293348|SIRT6|51548|sirtuin 6##AK315048|SIRT6|51548|sirtuin 6##AK301247|SIRT6|51548|sirtuin 6##AK074810|SIRT6|51548|sirtuin 6##AK225567|SIRT6|51548|sirtuin 6##AF233396|SIRT6|51548|sirtuin 6##NM_001193285|SIRT6|51548|sirtuin 6##NM_016539|SIRT6|51548|sirtuin 6##AK001236|CCDC94|55702|coiled-coil domain containing 94##BC000561|CCDC94|55702|coiled-coil domain containing 94##AK023988|CCDC94|55702|coiled-coil domain containing 94##NM_018074|CCDC94|55702|coiled-coil domain containing 94##AF091080|CCDC94|55702|coiled-coil domain containing 94##AK056268|SHD|56961|Src homology 2 domain containing transforming protein D##NM_020209|SHD|56961|Src homology 2 domain containing transforming protein D##HQ452865|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##HQ452866|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##AY358964|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##BC015655|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##NM_001169126|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##NM_144615|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2	0.995935	CTCF.p2:7:0.996
chr2	88754452	88754576	reg1019072.p2	6.247	+	NM_001135649	-2462	-	NM_018271 BC050699 BC035315 AK001778	-281758	+	NM_001244676 NM_001244678 AK289486 AK315831 BC064423	-284650	+	AK058098 NM_152670 BC029522	69670	+	AF110146 BC126354 BC126356 AK128659 TSC_hg19_v1_chr2_-_88926983 AK315287 AF193339 NM_004836	172464	-	TSC_hg19_v1_chr2_+_88991190 NM_144563 AY050633 BC015529	236701	+	NM_001135649|FOXI3|344167|forkhead box I3##NM_018271|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC050699|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC035315|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK001778|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001244676|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001244678|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK289486|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK315831|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC064423|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK058098|C2orf51|200523|chromosome 2 open reading frame 51##NM_152670|C2orf51|200523|chromosome 2 open reading frame 51##BC029522|C2orf51|200523|chromosome 2 open reading frame 51##AF110146|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126354|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126356|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK128659|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK315287|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AF193339|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##NM_004836|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##NM_144563|RPIA|22934|ribose 5-phosphate isomerase A##AY050633|RPIA|22934|ribose 5-phosphate isomerase A##BC015529|RPIA|22934|ribose 5-phosphate isomerase A	0.022855	
chrX	45608906	45609027	reg1021252.p2	6.247	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	-548853	-	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-876530	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-905653	+	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	697745	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	795890	-	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	795978	+	BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588	0.895609	CTCF.p2:-10:0.896
chr10	99629317	99629418	reg1021617.p1	6.246	+	BC110810 NM_001010917	-19373	+	BC050435 AF117758 NM_003015	-97634	-	NM_001002261 AL834235	-131101	+	AK292084 AJ276171 TSC_hg19_v1_chr10_-_99790379	160995	-	AK057190 NM_001206528 NM_018058	161217	-	NM_014472 AK292546 TSC_hg19_v1_chr10_+_99894414	265030	+	BC110810|GOLGA7B|401647|golgin A7 family, member B##NM_001010917|GOLGA7B|401647|golgin A7 family, member B##BC050435|SFRP5|6425|secreted frizzled-related protein 5##AF117758|SFRP5|6425|secreted frizzled-related protein 5##NM_003015|SFRP5|6425|secreted frizzled-related protein 5##NM_001002261|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AL834235|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK292084|CRTAC1|55118|cartilage acidic protein 1##AJ276171|CRTAC1|55118|cartilage acidic protein 1##AK057190|CRTAC1|55118|cartilage acidic protein 1##NM_001206528|CRTAC1|55118|cartilage acidic protein 1##NM_018058|CRTAC1|55118|cartilage acidic protein 1##NM_014472|C10orf28|27291|chromosome 10 open reading frame 28##AK292546|C10orf28|27291|chromosome 10 open reading frame 28	0.0	
chr11	72264898	72265040	reg1026165.p1	6.246	+	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	-119319	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	-119393	-	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	-119514	-	TSC_hg19_v1_chr11_-_72353458 AY495089 AK131525 AK092278 AX747449 NM_001143839 NM_001243784	88510	-	AY495087 NM_001146209	115138	-	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	120484	-	AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK131525|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK092278|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001143839|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001243784|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	0.771048	CTCF.p2:22:0.771
chr11	74450940	74451044	reg1023651.p1	6.246	+	BC142623 TSC_hg19_v1_chr11_-_74442472	-8539	-	NM_015424 AK304519 AY358522 AY279090 AY279091	-8787	-	AK302677 AK316370 D26018 NM_006591 TSC_hg19_v1_chr11_+_74303654 BC092454 AK316301 BC108908 BC108909 BC032636 BC058840 BC041703 AB383722	-147329	+	TSC_hg19_v1_chr11_+_74459915 AB082522 NM_001098638	8916	+	TSC_hg19_v1_chr11_-_74660137 AK056364	209132	-	TSC_hg19_v1_chr11_-_74660150 BC064584 BC037294 BC040541	209164	-	BC142623|CHRDL2|25884|chordin-like 2##NM_015424|CHRDL2|25884|chordin-like 2##AK304519|CHRDL2|25884|chordin-like 2##AY358522|CHRDL2|25884|chordin-like 2##AY279090|CHRDL2|25884|chordin-like 2##AY279091|CHRDL2|25884|chordin-like 2##AK302677|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316370|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##D26018|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_006591|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC092454|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316301|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108908|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108909|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC032636|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC058840|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC041703|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AB082522|RNF169|254225|ring finger protein 169##NM_001098638|RNF169|254225|ring finger protein 169##AK056364|XRRA1|143570|X-ray radiation resistance associated 1##BC064584|XRRA1|143570|X-ray radiation resistance associated 1##BC037294|XRRA1|143570|X-ray radiation resistance associated 1##BC040541|XRRA1|143570|X-ray radiation resistance associated 1	0.997482	CTCF.p2:8:0.997
chr8	33282279	33282384	reg1020429.p2	6.246	+	TSC_hg19_v1_chr8_+_32785485 BC034319	-496842	+	NM_001159996 AK293270 AK293240	-702939	+	AK289927 NM_013959	-778081	+	TSC_hg19_v1_chr8_-_33330616 BC004884	48282	-	AK098505 AK297132 TSC_hg19_v1_chr8_-_33330636 AK303231 AJ512465 AJ535838 AJ535839 AK292993 AJ582015 NM_032664	48315	-	NM_032509 TSC_hg19_v1_chr8_+_33342703 AK314491 AK225476 AK027469 BC015965 AF251062 BC039740 BC028230 BC050528 CU690708	60373	+	NM_001159996|NRG1|3084|neuregulin 1##AK293270|NRG1|3084|neuregulin 1##AK293240|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1##BC004884|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK098505|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK297132|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK303231|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ512465|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535838|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535839|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK292993|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ582015|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032664|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032509|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK314491|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK225476|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK027469|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC015965|MAK16|84549|MAK16 homolog (S. cerevisiae)##AF251062|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC039740|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC028230|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC050528|MAK16|84549|MAK16 homolog (S. cerevisiae)	0.069395	
chrX	152094895	152095024	reg1025213.p1	6.246	+	AK301530 NM_001178113	-8551	+	AK296967 NM_001178106 NM_001178107 NM_001178108 NM_001178109 NM_001178110 NM_007150 AY997296 DQ508022 DQ508023 DQ508024 DQ508025 DQ508026	-11950	+	TSC_hg19_v1_chrX_+_151999606 AK026549	-95347	+	NM_001178115 AK095258	15270	+	BC101111 BC101112 BC101113 BC101114 AK295446 AK316104 AB067521 AY121806 NM_001103150 NM_001103151 NM_052926	65723	-	NM_001184924	67711	-	AK301530|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178113|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK296967|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178106|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178107|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178108|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178109|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178110|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_007150|ZNF185|7739|zinc finger protein 185 (LIM domain)##AY997296|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508022|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508023|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508024|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508025|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508026|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK026549|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##NM_001178115|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK095258|ZNF185|7739|zinc finger protein 185 (LIM domain)##BC101111|PNMA5|114824|paraneoplastic antigen like 5##BC101112|PNMA5|114824|paraneoplastic antigen like 5##BC101113|PNMA5|114824|paraneoplastic antigen like 5##AK295446|PNMA5|114824|paraneoplastic antigen like 5##AK316104|PNMA5|114824|paraneoplastic antigen like 5##AB067521|PNMA5|114824|paraneoplastic antigen like 5##AY121806|PNMA5|114824|paraneoplastic antigen like 5##NM_001103150|PNMA5|114824|paraneoplastic antigen like 5##NM_001103151|PNMA5|114824|paraneoplastic antigen like 5##NM_052926|PNMA5|114824|paraneoplastic antigen like 5##NM_001184924|PNMA5|114824|paraneoplastic antigen like 5	0.92848	CTCF.p2:11:0.928
chr14	29243719	29243834	reg1023035.p1	6.245	+	TSC_hg19_v1_chr14_+_29241992 BX248251	-1781	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-6863	+	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	-7548	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	1153078	-	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	1784584	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	1847748	+	BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1	0.0	
chr16	87428164	87428292	reg1023848.p1	6.245	+	TSC_hg19_v1_chr16_+_87425998 AF303888 AM393561 DQ893152 DQ896448 AB528176 AL834298	-2214	+	TSC_hg19_v1_chr16_+_87425947 AK025556 BC067797 BC018634	-2265	+	TSC_hg19_v1_chr16_+_87425938 AK290956 BC048009 AK310224 AK310335 AF087871 AF183417	-2319	+	AB011151 AB384500 NM_015144 AB030243 BC101478	97162	-	AB593088 TSC_hg19_v1_chr16_+_87636492 NM_020655 BC036533	208273	+	TSC_hg19_v1_chr16_+_87636574 AB042636	208350	+	AF303888|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AM393561|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ893152|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ896448|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AL834298|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK025556|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC067797|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC018634|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK290956|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC048009|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK310224|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK310335|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AF087871|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AF183417|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AB011151|ZCCHC14|23174|zinc finger, CCHC domain containing 14##NM_015144|ZCCHC14|23174|zinc finger, CCHC domain containing 14##AB030243|ZCCHC14|23174|zinc finger, CCHC domain containing 14##BC101478|ZCCHC14|23174|zinc finger, CCHC domain containing 14##NM_020655|JPH3|57338|junctophilin 3##BC036533|JPH3|57338|junctophilin 3##AB042636|JPH3|57338|junctophilin 3	0.01687	
chr8	117728014	117728151	reg1025494.p1	6.245	+	TSC_hg19_v1_chr8_-_116681365 AF183810	-1046747	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	-1046917	-	TSC_hg19_v1_chr8_-_116680208 AK304046	-1047862	-	TSC_hg19_v1_chr8_-_117768041 BC000386 BT019594 CR456906 CU674186 AK222620 U54559 BC090880	39955	-	AK222520 TSC_hg19_v1_chr8_-_117768063 AK296162 NM_003756	39989	-	BC005955 BC022441 NM_032334 TSC_hg19_v1_chr8_+_117778752	50669	+	AF183810|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC000386|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BT019594|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##CR456906|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222620|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##U54559|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC090880|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222520|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK296162|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##NM_003756|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC005955|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC022441|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##NM_032334|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)	0.806072	CTCF.p2:20:0.806
chr14	55240047	55240182	reg1002347.p1	6.244	+	NM_001161577 BC021726	-18587	+	TSC_hg19_v1_chr14_+_55168831 AB028976	-71225	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	-205478	+	AY137463 AY137464 AY137465 Z16418 S44049 CR536551 DQ892998 DQ896245 S43856 S44053 TSC_hg19_v1_chr14_-_55369545 Z29433 Z29434 U66095 BC025415 U19523 U66097 NM_000161 NM_001024024 NM_001024070 NM_001024071	129300	-	TSC_hg19_v1_chr14_-_55493780 BC000622 BC005040 AK293005 BC063041	253671	-	TSC_hg19_v1_chr14_-_55493818 BC043349 NM_001008396 NM_007086	253697	-	NM_001161577|SAMD4A|23034|sterile alpha motif domain containing 4A##BC021726|SAMD4A|23034|sterile alpha motif domain containing 4A##AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A##AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##AY137463|GCH1|2643|GTP cyclohydrolase 1##AY137464|GCH1|2643|GTP cyclohydrolase 1##AY137465|GCH1|2643|GTP cyclohydrolase 1##Z16418|GCH1|2643|GTP cyclohydrolase 1##S44049|GCH1|2643|GTP cyclohydrolase 1##CR536551|GCH1|2643|GTP cyclohydrolase 1##DQ892998|GCH1|2643|GTP cyclohydrolase 1##DQ896245|GCH1|2643|GTP cyclohydrolase 1##S43856|GCH1|2643|GTP cyclohydrolase 1##S44053|GCH1|2643|GTP cyclohydrolase 1##Z29433|GCH1|2643|GTP cyclohydrolase 1##Z29434|GCH1|2643|GTP cyclohydrolase 1##U66095|GCH1|2643|GTP cyclohydrolase 1##BC025415|GCH1|2643|GTP cyclohydrolase 1##U19523|GCH1|2643|GTP cyclohydrolase 1##U66097|GCH1|2643|GTP cyclohydrolase 1##NM_000161|GCH1|2643|GTP cyclohydrolase 1##NM_001024024|GCH1|2643|GTP cyclohydrolase 1##NM_001024070|GCH1|2643|GTP cyclohydrolase 1##NM_001024071|GCH1|2643|GTP cyclohydrolase 1##BC000622|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC005040|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##AK293005|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC063041|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC043349|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_001008396|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_007086|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1	1.233959	CTCF.p2:10:0.977	CTCF.p2:-85:0.257
chr17	42856815	42856930	reg1005258.p2	6.244	+	BC144550 AB462930 AB009675 NM_002390 TSC_hg19_v1_chr17_+_42836567 AK296512	-20253	+	CU677579 AK295296 BC026999 TSC_hg19_v1_chr17_+_42786269	-70635	+	TSC_hg19_v1_chr17_+_42786060 BC033660	-70810	+	NM_005497 TSC_hg19_v1_chr17_-_42907633	50768	-	NM_001080383	51306	-	BC020667 NM_016438	68406	+	BC144550|ADAM11|4185|ADAM metallopeptidase domain 11##AB009675|ADAM11|4185|ADAM metallopeptidase domain 11##NM_002390|ADAM11|4185|ADAM metallopeptidase domain 11##AK296512|ADAM11|4185|ADAM metallopeptidase domain 11##AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##NM_005497|GJC1|10052|gap junction protein, gamma 1, 45kDa##NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa##BC020667|HIGD1B|51751|HIG1 hypoxia inducible domain family, member 1B##NM_016438|HIGD1B|51751|HIG1 hypoxia inducible domain family, member 1B	0.990451	CTCF.p2:-2:0.990
chr18	45282891	45282999	reg1022769.p1	6.244	+	TSC_hg19_v1_chr18_-_44702736 NM_016097	-580195	-	TSC_hg19_v1_chr18_-_44702734 AK027108	-580212	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	-580256	-	BC014840 NM_005901	173980	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	174270	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	174544	-	NM_016097|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2	0.996459	CTCF.p2:6:0.996
chr6	109917260	109917343	reg1020993.p1	6.244	+	TSC_hg19_v1_chr6_-_109804443 AB007901 NM_001164313 NM_014797	-112842	-	TSC_hg19_v1_chr6_-_109804420 AK309697 BC036731	-112929	-	TSC_hg19_v1_chr6_-_109777182 AB048948 NM_001159291 NM_022765	-140121	-	TSC_hg19_v1_chr6_-_110012389 AK092103 AX747355 AK315561 AK055538 AL832162 NM_001145128 NM_145025 BC022031	95082	-	NM_014845 TSC_hg19_v1_chr6_+_110012488 BC041338	95155	+	TSC_hg19_v1_chr6_+_110012514 AK291671 AK293422 D87464	95207	+	AB007901|ZBTB24|9841|zinc finger and BTB domain containing 24##NM_001164313|ZBTB24|9841|zinc finger and BTB domain containing 24##NM_014797|ZBTB24|9841|zinc finger and BTB domain containing 24##AK309697|ZBTB24|9841|zinc finger and BTB domain containing 24##BC036731|ZBTB24|9841|zinc finger and BTB domain containing 24##AB048948|MICAL1|64780|microtubule associated monoxygenase, calponin and LIM domain containing 1##NM_001159291|MICAL1|64780|microtubule associated monoxygenase, calponin and LIM domain containing 1##NM_022765|MICAL1|64780|microtubule associated monoxygenase, calponin and LIM domain containing 1##AK315561|AKD1|221264|adenylate kinase domain containing 1##AK055538|AKD1|221264|adenylate kinase domain containing 1##AL832162|AKD1|221264|adenylate kinase domain containing 1##NM_001145128|AKD1|221264|adenylate kinase domain containing 1##NM_145025|AKD1|221264|adenylate kinase domain containing 1##BC022031|AKD1|221264|adenylate kinase domain containing 1##NM_014845|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##BC041338|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK291671|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK293422|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##D87464|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)	0.612806	CTCF.p2:-7:0.613
chr7	28101899	28102021	reg1024320.p1	6.244	+	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-322141	+	BC001764 TSC_hg19_v1_chr7_+_27779809	-322151	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	-322185	+	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	118241	-	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	118446	-	L05913 NM_182899	236979	+	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5	0.98444	CTCF.p2:-22:0.984
chr9	139524692	139524791	reg1000791.p1	6.244	+	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	-84491	-	TSC_hg19_v1_chr9_-_139378220 AB593115	-146499	-	BC036221 NM_152571 AK055336	-146771	+	NM_016215 AL512735 AY358903 BC088371 AY358902	32660	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	35474	+	BC012377 TSC_hg19_v1_chr9_+_139560248	35530	+	AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7##BC012377|EGFL7|51162|EGF-like-domain, multiple 7	0.766573	CTCF.p2:-5:0.767
chr11	17376172	17376273	reg1023255.p2	6.243	+	TSC_hg19_v1_chr11_+_17373346 CR749521 NM_001202439 BX537685 BC136797 BC136800	-2881	+	TSC_hg19_v1_chr11_+_17332454 BC172867	-43739	+	TSC_hg19_v1_chr11_+_17298285 EU039832 EU039833 NM_005013 X76732 BC111556 AF450266	-77909	+	BC064497 NM_000525	33983	-	BC040617 AK301550 NM_001166290 TSC_hg19_v1_chr11_-_17410958	34688	-	U63421 HM635782 TSC_hg19_v1_chr11_-_17498355 AK297560 AF087138 L78207 AB209084	122121	-	CR749521|B7H6|374383|B7 homolog 6##NM_001202439|B7H6|374383|B7 homolog 6##BX537685|B7H6|374383|B7 homolog 6##BC136797|B7H6|374383|B7 homolog 6##BC136800|B7H6|374383|B7 homolog 6##EU039832|NUCB2|4925|nucleobindin 2##EU039833|NUCB2|4925|nucleobindin 2##NM_005013|NUCB2|4925|nucleobindin 2##X76732|NUCB2|4925|nucleobindin 2##BC111556|NUCB2|4925|nucleobindin 2##AF450266|NUCB2|4925|nucleobindin 2##BC064497|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##NM_000525|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##BC040617|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##AK301550|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##NM_001166290|KCNJ11|3767|potassium inwardly-rectifying channel, subfamily J, member 11##U63421|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##HM635782|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AK297560|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AF087138|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##L78207|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8##AB209084|ABCC8|6833|ATP-binding cassette, sub-family C (CFTR/MRP), member 8	0.999584	CTCF.p2:-9:1.000
chr17	42988584	42988709	reg1026044.p1	6.243	+	AK023156 AK091530 AX747040 AK289760 BC041060 NM_213607	-11499	+	TSC_hg19_v1_chr17_-_42976845 NM_001142605 NM_004247	-11729	-	TSC_hg19_v1_chr17_-_42976842 AK126464	-11813	-	M26638 TSC_hg19_v1_chr17_-_42988747	70	-	BC127871 TSC_hg19_v1_chr17_-_42988807	156	-	BC062609 AB463686 J04569 BC013596 AF419299 BC041765 AK128790 TSC_hg19_v1_chr17_-_42992869 AK098380 AK098758 AK222683 AK295734 AK296259 AK303728 S40719 AK315398 NM_001131019 NM_001242376 NM_002055	4239	-	AK023156|CCDC103|388389|coiled-coil domain containing 103##AK091530|CCDC103|388389|coiled-coil domain containing 103##AK289760|CCDC103|388389|coiled-coil domain containing 103##BC041060|CCDC103|388389|coiled-coil domain containing 103##NM_213607|CCDC103|388389|coiled-coil domain containing 103##NM_001142605|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##NM_004247|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK126464|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##M26638|GFAP|2670|glial fibrillary acidic protein##BC127871|GFAP|2670|glial fibrillary acidic protein##BC062609|GFAP|2670|glial fibrillary acidic protein##J04569|GFAP|2670|glial fibrillary acidic protein##BC013596|GFAP|2670|glial fibrillary acidic protein##AF419299|GFAP|2670|glial fibrillary acidic protein##BC041765|GFAP|2670|glial fibrillary acidic protein##AK128790|GFAP|2670|glial fibrillary acidic protein##AK098380|GFAP|2670|glial fibrillary acidic protein##AK098758|GFAP|2670|glial fibrillary acidic protein##AK222683|GFAP|2670|glial fibrillary acidic protein##AK295734|GFAP|2670|glial fibrillary acidic protein##AK296259|GFAP|2670|glial fibrillary acidic protein##AK303728|GFAP|2670|glial fibrillary acidic protein##S40719|GFAP|2670|glial fibrillary acidic protein##AK315398|GFAP|2670|glial fibrillary acidic protein##NM_001131019|GFAP|2670|glial fibrillary acidic protein##NM_001242376|GFAP|2670|glial fibrillary acidic protein##NM_002055|GFAP|2670|glial fibrillary acidic protein	0.807457	CTCF.p2:-10:0.807
chr10	134260362	134260490	reg1024380.p1	6.242	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-1743	+	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	-49717	+	TSC_hg19_v1_chr10_+_134145696 AK098652 BC050097 AK295953 AB051461 BC029902 NM_001143757 AK097418	-114716	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	90886	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	339080	-	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	495612	-	BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##AK098652|LRRC27|80313|leucine rich repeat containing 27##BC050097|LRRC27|80313|leucine rich repeat containing 27##AK295953|LRRC27|80313|leucine rich repeat containing 27##AB051461|LRRC27|80313|leucine rich repeat containing 27##BC029902|LRRC27|80313|leucine rich repeat containing 27##NM_001143757|LRRC27|80313|leucine rich repeat containing 27##AK097418|LRRC27|80313|leucine rich repeat containing 27##BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40	0.653143	CTCF.p2:2:0.653
chr10	61340113	61340239	reg1022064.p1	6.242	+	AK299924 NM_001143773	-217516	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-217891	-	AL365474 NM_001143774 AM393181	-402888	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	129548	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	326025	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	326148	-	AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6	0.188926	
chr11	134077458	134077623	reg1022024.p1	6.242	+	AK075309 AK125071 AK225666 TSC_hg19_v1_chr11_+_133938965 BC057284 AJ344431 AF356518 BC012147 BC010690	-138568	+	AJ416101 NM_001205329 NM_032801 AY358335 TSC_hg19_v1_chr11_+_133938938 AK074769 AF448478	-138659	+	NM_014987 TSC_hg19_v1_chr11_-_133826886	-250658	-	TSC_hg19_v1_chr11_-_134093862 D29954	16306	-	TSC_hg19_v1_chr11_-_134093881 BC098398	16341	-	TSC_hg19_v1_chr11_-_134094442 AK124878 NM_015261	16902	-	AK075309|JAM3|83700|junctional adhesion molecule 3##AK125071|JAM3|83700|junctional adhesion molecule 3##AK225666|JAM3|83700|junctional adhesion molecule 3##BC057284|JAM3|83700|junctional adhesion molecule 3##AJ344431|JAM3|83700|junctional adhesion molecule 3##AF356518|JAM3|83700|junctional adhesion molecule 3##BC012147|JAM3|83700|junctional adhesion molecule 3##BC010690|JAM3|83700|junctional adhesion molecule 3##AJ416101|JAM3|83700|junctional adhesion molecule 3##NM_001205329|JAM3|83700|junctional adhesion molecule 3##NM_032801|JAM3|83700|junctional adhesion molecule 3##AY358335|JAM3|83700|junctional adhesion molecule 3##AK074769|JAM3|83700|junctional adhesion molecule 3##AF448478|JAM3|83700|junctional adhesion molecule 3##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B##D29954|NCAPD3|23310|non-SMC condensin II complex, subunit D3##BC098398|NCAPD3|23310|non-SMC condensin II complex, subunit D3##AK124878|NCAPD3|23310|non-SMC condensin II complex, subunit D3##NM_015261|NCAPD3|23310|non-SMC condensin II complex, subunit D3	0.989599	CTCF.p2:-10:0.990
chr12	75831485	75831588	reg1024194.p1	6.242	+	TSC_hg19_v1_chr12_+_75784878 BX640916 BC029557 NM_152436 DQ891533 DQ894722	-46651	+	BC016749 AK093175 AX747973 TSC_hg19_v1_chr12_+_75784869	-46677	+	AY358731 BC014603 NM_152779 DQ894020 EU176187 CU677065	-103074	+	NM_006851 TSC_hg19_v1_chr12_+_75874534 AK304847 X91911 BC005227 U16307 BC012510 AF400440 AK313449 CU680346 AB529136 EF667354	43050	+	CU689792 DQ893552 DQ893553 DQ893554 DQ896515 EF010919 TSC_hg19_v1_chr12_-_75905381 AK297602 AK313687	73842	-	AK022133 TSC_hg19_v1_chr12_-_75905382 BC016778 U55766	73849	-	BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##NM_006851|GLIPR1|11010|GLI pathogenesis-related 1##AK304847|GLIPR1|11010|GLI pathogenesis-related 1##X91911|GLIPR1|11010|GLI pathogenesis-related 1##BC005227|GLIPR1|11010|GLI pathogenesis-related 1##U16307|GLIPR1|11010|GLI pathogenesis-related 1##BC012510|GLIPR1|11010|GLI pathogenesis-related 1##AF400440|GLIPR1|11010|GLI pathogenesis-related 1##AK313449|GLIPR1|11010|GLI pathogenesis-related 1##EF667354|GLIPR1|11010|GLI pathogenesis-related 1##DQ893552|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ893553|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ893554|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ896515|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##EF010919|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK297602|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK313687|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK022133|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC016778|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##U55766|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)	0.498079	CTCF.p2:0:0.498
chr14	34793693	34793814	reg1022994.p1	6.242	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	-373604	-	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1385263	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1995217	+	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	137734	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	215132	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	305602	-	BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6	0.8233	CTCF.p2:-2:0.823
chr17	72456555	72456639	reg1019707.p1	6.242	+	TSC_hg19_v1_chr17_+_72439191 AK126429	-17392	+	AJ276102 NM_018653	-26762	+	AK075397 AF207989 AK222909 TSC_hg19_v1_chr17_+_72428254 AK000249	-28342	+	NM_007261 AJ224864 BC032352	5941	+	AF020314 TSC_hg19_v1_chr17_+_72462772	6173	+	TSC_hg19_v1_chr17_+_72462821 AF161346 AJ010101 AJ010102 AJ010103 AJ238323 AK309636 BC020681 AB590938 CU689350	6213	+	AK126429|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AJ276102|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_018653|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_007261|CD300A|11314|CD300a molecule##AJ224864|CD300A|11314|CD300a molecule##BC032352|CD300A|11314|CD300a molecule##AF020314|CD300A|11314|CD300a molecule##AF161346|CD300A|11314|CD300a molecule##AJ010101|CD300A|11314|CD300a molecule##AJ010102|CD300A|11314|CD300a molecule##AJ010103|CD300A|11314|CD300a molecule##AJ238323|CD300A|11314|CD300a molecule##AK309636|CD300A|11314|CD300a molecule##BC020681|CD300A|11314|CD300a molecule	0.146696	
chr2	242755102	242755276	reg1018566.p2	6.242	+	AK091038 AX746745 NM_001167599 NM_001167602 NM_080741 BC012899	-3139	+	TSC_hg19_v1_chr2_+_242750289 AK289421 AK300969 AK025617 AK096992 AK298403 AY203952	-4895	+	NM_001167600 NM_001167601 TSC_hg19_v1_chr2_+_242750226	-4993	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	45835	-	AK090909 AX746675 BC113517 BC113519 NM_173821	56693	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	275670	+	AK091038|NEU4|129807|sialidase 4##NM_001167599|NEU4|129807|sialidase 4##NM_001167602|NEU4|129807|sialidase 4##NM_080741|NEU4|129807|sialidase 4##BC012899|NEU4|129807|sialidase 4##AK289421|NEU4|129807|sialidase 4##AK300969|NEU4|129807|sialidase 4##AK025617|NEU4|129807|sialidase 4##AK096992|NEU4|129807|sialidase 4##AK298403|NEU4|129807|sialidase 4##AY203952|NEU4|129807|sialidase 4##NM_001167600|NEU4|129807|sialidase 4##NM_001167601|NEU4|129807|sialidase 4##AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1##AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AK298283|LOC728323|728323|uncharacterized LOC728323	0.0	
chr10	9344238	9344338	reg1020043.p1	6.241	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-1246805	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-1247513	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-1247639	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	1702969	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	1702997	+	AK299548 TSC_hg19_v1_chr10_+_11047339	1703052	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.818025	CTCF.p2:34:0.818
chr14	66427852	66427987	reg1024674.p1	6.241	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-548194	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-548431	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-548593	-	AB037806 AF272663 NM_001024218 NM_020806	546205	+	TSC_hg19_v1_chr14_+_66974859 AK025169	546934	+	TSC_hg19_v1_chr14_+_66974870 AK315569	546950	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.98966	CTCF.p2:0:0.990
chr18	19180926	19181073	reg1022596.p2	6.241	+	TSC_hg19_v1_chr18_-_19180830 AL832041	-123	-	TSC_hg19_v1_chr18_-_19180666 NM_052911 AK096746	-321	-	TSC_hg19_v1_chr18_-_19180616 AB067498	-380	-	TSC_hg19_v1_chr18_+_19192269 J03798 NM_006938 BC001721	11252	+	TSC_hg19_v1_chr18_+_19192302 AJ577268 BC072427	11317	+	CU676866 AK024880 TSC_hg19_v1_chr18_-_19284733 AF007152 BC021196 AK298728	103680	-	AL832041|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##NM_052911|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##AK096746|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##AB067498|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##J03798|SNRPD1|6632|small nuclear ribonucleoprotein D1 polypeptide 16kDa##NM_006938|SNRPD1|6632|small nuclear ribonucleoprotein D1 polypeptide 16kDa##BC001721|SNRPD1|6632|small nuclear ribonucleoprotein D1 polypeptide 16kDa##AJ577268|SNRPD1|6632|small nuclear ribonucleoprotein D1 polypeptide 16kDa##BC072427|SNRPD1|6632|small nuclear ribonucleoprotein D1 polypeptide 16kDa##AK024880|ABHD3|171586|abhydrolase domain containing 3##AF007152|ABHD3|171586|abhydrolase domain containing 3##BC021196|ABHD3|171586|abhydrolase domain containing 3##AK298728|ABHD3|171586|abhydrolase domain containing 3	0.991741	CTCF.p2:-6:0.992
chr6	12370083	12370215	reg1021331.p1	6.241	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	-79556	+	NM_002114	-357426	+	NM_001143948 NM_032744	-590870	-	TSC_hg19_v1_chr6_+_12514301 D28417	144153	+	AK295263 TSC_hg19_v1_chr6_+_12716998	346794	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	346894	+	NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1	0.0	
chr6	163975811	163975956	reg1025793.p1	6.241	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	-139651	+	TSC_hg19_v1_chr6_+_163835795 AF272349	-140093	+	TSC_hg19_v1_chr6_+_163835675 AB067798 AB067799 AB067800 AB067801 NM_006775 NM_206853 NM_206854 NM_206855	-140211	+	AL050218 TSC_hg19_v1_chr6_+_163984651	8730	+	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	1747209	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	2099813	-	BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##AB067798|QKI|9444|QKI, KH domain containing, RNA binding##AB067799|QKI|9444|QKI, KH domain containing, RNA binding##AB067800|QKI|9444|QKI, KH domain containing, RNA binding##AB067801|QKI|9444|QKI, KH domain containing, RNA binding##NM_006775|QKI|9444|QKI, KH domain containing, RNA binding##NM_206853|QKI|9444|QKI, KH domain containing, RNA binding##NM_206854|QKI|9444|QKI, KH domain containing, RNA binding##NM_206855|QKI|9444|QKI, KH domain containing, RNA binding##AL050218|QKI|9444|QKI, KH domain containing, RNA binding##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A	0.601481	CTCF.p2:29:0.601
chr7	1183872	1183995	reg1020078.p1	6.241	+	TSC_hg19_v1_chr7_-_1177884 AF495721 BC006224 NM_001134395 NM_001134396 NM_032350	-6071	-	NM_001098201 AK289588 U63917 BC067849	-56180	+	NM_001039966 NM_001505 AF015257	-57457	+	BC016963 TSC_hg19_v1_chr7_-_1199799 AK027118 BC029558	15865	-	AK290170 TSC_hg19_v1_chr7_-_1199815	15881	-	TSC_hg19_v1_chr7_-_1199853 NM_182491	15906	-	AF495721|C7orf50|84310|chromosome 7 open reading frame 50##BC006224|C7orf50|84310|chromosome 7 open reading frame 50##NM_001134395|C7orf50|84310|chromosome 7 open reading frame 50##NM_001134396|C7orf50|84310|chromosome 7 open reading frame 50##NM_032350|C7orf50|84310|chromosome 7 open reading frame 50##NM_001098201|GPER|2852|G protein-coupled estrogen receptor 1##AK289588|GPER|2852|G protein-coupled estrogen receptor 1##U63917|GPER|2852|G protein-coupled estrogen receptor 1##BC067849|GPER|2852|G protein-coupled estrogen receptor 1##NM_001039966|GPER|2852|G protein-coupled estrogen receptor 1##NM_001505|GPER|2852|G protein-coupled estrogen receptor 1##AF015257|GPER|2852|G protein-coupled estrogen receptor 1##BC016963|ZFAND2A|90637|zinc finger, AN1-type domain 2A##AK027118|ZFAND2A|90637|zinc finger, AN1-type domain 2A##BC029558|ZFAND2A|90637|zinc finger, AN1-type domain 2A##AK290170|ZFAND2A|90637|zinc finger, AN1-type domain 2A##NM_182491|ZFAND2A|90637|zinc finger, AN1-type domain 2A	0.0	
chr2	130915807	130915947	reg1021755.p1	6.240	+	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	-13266	-	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	-29019	-	NM_032144 AL136727	-178642	+	TSC_hg19_v1_chr2_-_130929945 BC040941	14124	-	TSC_hg19_v1_chr2_-_130939163 BC064947 AK000304 AK303519 AK303427 AK301576 AK056501 AK298609 EU367941 AK299185 AK297257 NM_001171083 NM_017751 NM_017951	23360	-	NM_025029	23623	+	AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##BC040941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##BC064947|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK000304|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK303519|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK303427|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK301576|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK056501|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK298609|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##EU367941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK299185|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK297257|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_001171083|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_017751|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_017951|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_025029|MZT2B|80097|mitotic spindle organizing protein 2B	0.0	
chr2	7259286	7259425	reg1025656.p1	6.240	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-201768	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-241492	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-252652	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1562848	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1718364	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1884466	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.640069	CTCF.p2:-13:0.640
chr2	8442231	8442395	reg1020483.p1	6.239	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1384726	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1424450	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1435610	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	379890	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	535406	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	701508	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr4	55706711	55706892	reg1023502.p1	6.239	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	-182667	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-611337	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-611521	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	284953	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	505615	+	TSC_hg19_v1_chr4_+_56212475 CU677982 CR457312	505683	+	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3##CR457312|SRD5A3|79644|steroid 5 alpha-reductase 3	0.777556	CTCF.p2:18:0.778
chr11	119870105	119870211	reg1020040.p2	6.238	+	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	-270776	-	BC037832 NM_006288	-575915	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-576249	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	129388	-	AK299472 TSC_hg19_v1_chr11_-_120008323	138114	-	AB464321 CU675956 EU446943 TSC_hg19_v1_chr11_-_120008772	138597	-	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29##EU446943|TRIM29|23650|tripartite motif containing 29	0.032707	
chr12	125235468	125235570	reg1023175.p2	6.238	+	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	-183444	-	TSC_hg19_v1_chr12_-_125002875 BC033087	-232660	-	AK126577 NM_181709	-461810	+	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	112786	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	112858	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	112954	-	AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr1	58621156	58621296	reg1021569.p1	6.238	+	TSC_hg19_v1_chr1_-_57888785 AK313144	-732398	-	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	-1189510	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	-1300718	+	TSC_hg19_v1_chr1_-_58716179 CR933698 AB210012	94956	-	TSC_hg19_v1_chr1_-_58716210 AK095513 NM_021080	94983	-	TSC_hg19_v1_chr1_-_59012387 AF263547 NM_145243 AB048348 BC012915 AK308847	391197	-	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##CR933698|DAB1|1600|disabled homolog 1 (Drosophila)##AB210012|DAB1|1600|disabled homolog 1 (Drosophila)##AK095513|DAB1|1600|disabled homolog 1 (Drosophila)##NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)##NM_145243|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AB048348|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BC012915|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AK308847|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)	0.841555	CTCF.p2:-9:0.842
chr6	64284322	64284447	reg1021477.p1	6.238	+	TSC_hg19_v1_chr6_+_64282463 BC023975	-1841	+	TSC_hg19_v1_chr6_+_64282432 AK312526	-1949	+	TSC_hg19_v1_chr6_+_64281913 BC045571 NM_003463	-2468	+	TSC_hg19_v1_chr6_+_64286554 U48296 AB385532 CU692824 DQ890715 DQ893895 EU831599 EU831686 AB451314 AB451444	2226	+	TSC_hg19_v1_chr6_+_64345706 AK055678	61306	+	TSC_hg19_v1_chr6_+_64345719 AK307869	61332	+	BC023975|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AK312526|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##U48296|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##DQ890715|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##DQ893895|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##EU831599|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##EU831686|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AB451314|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AB451444|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AK055678|PHF3|23469|PHD finger protein 3##AK307869|PHF3|23469|PHD finger protein 3	0.910787	CTCF.p2:16:0.911
chr9	37904309	37904438	reg1020458.p1	6.238	+	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	-7	-	AK091407 AX746962 TSC_hg19_v1_chr9_-_37904125 BC008500 BC063563	-244	-	TSC_hg19_v1_chr9_+_37800815 BC108686	-103565	+	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	164768	-	X75342 NM_003028 TSC_hg19_v1_chr9_-_38069225 BC094765	164868	-	TSC_hg19_v1_chr9_+_38392669 NM_000692	488300	+	AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##AK091407|MCART1|92014|mitochondrial carrier triple repeat 1##BC008500|MCART1|92014|mitochondrial carrier triple repeat 1##BC063563|MCART1|92014|mitochondrial carrier triple repeat 1##BC108686|DCAF10|79269|DDB1 and CUL4 associated factor 10##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B##X75342|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_003028|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1	0.558824	CTCF.p2:38:0.559
chr9	72492891	72493013	reg1021356.p1	6.238	+	NM_001010940 BC150564 BC136709 BC144373 BC144374 BC144375	-57216	+	TSC_hg19_v1_chr9_-_72374870 AL832683 BC053622 NM_001099666	-118056	-	TSC_hg19_v1_chr9_-_72287241 AF029106 AF047347 NM_001163	-205748	-	BC040299 BC045569 NM_153267 BC063634	165555	+	AK304040 TSC_hg19_v1_chr9_+_72658764 BC016383 AK304531	165869	+	TSC_hg19_v1_chr9_-_72873739 CR936772 AK124136 BC040840	380812	-	NM_001010940|C9orf135|138255|chromosome 9 open reading frame 135##BC150564|C9orf135|138255|chromosome 9 open reading frame 135##BC136709|C9orf135|138255|chromosome 9 open reading frame 135##BC144373|C9orf135|138255|chromosome 9 open reading frame 135##BC144374|C9orf135|138255|chromosome 9 open reading frame 135##BC144375|C9orf135|138255|chromosome 9 open reading frame 135##AL832683|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##BC053622|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##NM_001099666|PTAR1|375743|protein prenyltransferase alpha subunit repeat containing 1##AF029106|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##AF047347|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##NM_001163|APBA1|320|amyloid beta (A4) precursor protein-binding, family A, member 1##BC040299|MAMDC2|256691|MAM domain containing 2##BC045569|MAMDC2|256691|MAM domain containing 2##NM_153267|MAMDC2|256691|MAM domain containing 2##BC063634|MAMDC2|256691|MAM domain containing 2##AK304040|MAMDC2|256691|MAM domain containing 2##BC016383|MAMDC2|256691|MAM domain containing 2##AK304531|MAMDC2|256691|MAM domain containing 2##CR936772|LOC100507299|100507299|uncharacterized LOC100507299##AK124136|LOC100507299|100507299|uncharacterized LOC100507299##BC040840|LOC100507299|100507299|uncharacterized LOC100507299	0.521057	CTCF.p2:32:0.521
chr6	144121963	144122030	reg1022872.p1	6.237	+	TSC_hg19_v1_chr6_+_143999112 AK298263 NM_001100164 NM_001100165 CR749345 AK297799	-122819	+	NM_001100166 NM_014721 AK300221 AB014580 BC152416 BC150630	-192634	+	CU678350 AK296485 BC003060 AK075458 TSC_hg19_v1_chr6_-_143832841 AY358551 BC051268 AK315475 NM_032020	-289102	-	TSC_hg19_v1_chr6_+_144164476 AK095269 BC009855 NM_032860	42493	+	TSC_hg19_v1_chr6_+_144164521 AK300360	42540	+	BC146950 BC146969 BC171862 NM_001013623	63576	+	AK298263|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100164|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100165|PHACTR2|9749|phosphatase and actin regulator 2##CR749345|PHACTR2|9749|phosphatase and actin regulator 2##AK297799|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100166|PHACTR2|9749|phosphatase and actin regulator 2##NM_014721|PHACTR2|9749|phosphatase and actin regulator 2##AK300221|PHACTR2|9749|phosphatase and actin regulator 2##AB014580|PHACTR2|9749|phosphatase and actin regulator 2##BC152416|PHACTR2|9749|phosphatase and actin regulator 2##BC150630|PHACTR2|9749|phosphatase and actin regulator 2##AK296485|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC003060|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK075458|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AY358551|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC051268|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK315475|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_032020|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)##NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)##AK300360|LTV1|84946|LTV1 homolog (S. cerevisiae)##BC146950|C6orf94|153918|chromosome 6 open reading frame 94##BC146969|C6orf94|153918|chromosome 6 open reading frame 94##BC171862|C6orf94|153918|chromosome 6 open reading frame 94##NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94	0.0	
chrX	150674426	150674571	reg1025797.p1	6.237	+	TSC_hg19_v1_chrX_+_150565705 BC103701 BC103702 BC105693 BC105694 AL833596 BC110800 AM392666 AB528749	-108763	+	TSC_hg19_v1_chrX_+_150565686 AK096835	-108818	+	TSC_hg19_v1_chrX_+_150565667 NM_001017980	-108836	+	NM_173493 AK097552 BC040301 AY270020	57605	+	NM_024082	189231	+	BC022064 AF249872 NM_033085 AK057369 AB528542 AM393498 CU692478 DQ892418 DQ895632	210050	+	BC103701|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC103702|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC105693|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC105694|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AL833596|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC110800|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AM392666|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AK096835|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##NM_001017980|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##NM_173493|PASD1|139135|PAS domain containing 1##AK097552|PASD1|139135|PAS domain containing 1##BC040301|PASD1|139135|PAS domain containing 1##AY270020|PASD1|139135|PAS domain containing 1##NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)##BC022064|FATE1|89885|fetal and adult testis expressed 1##AF249872|FATE1|89885|fetal and adult testis expressed 1##NM_033085|FATE1|89885|fetal and adult testis expressed 1##AM393498|FATE1|89885|fetal and adult testis expressed 1##DQ892418|FATE1|89885|fetal and adult testis expressed 1##DQ895632|FATE1|89885|fetal and adult testis expressed 1	0.872024	CTCF.p2:-15:0.872
chr12	123722741	123722889	reg1024787.p1	6.236	+	NM_001143905	-4525	+	NM_152269 TSC_hg19_v1_chr12_+_123717982 BC020885 BC062329 AF061733 AK025908 NM_001194995 BC018145	-4865	+	TSC_hg19_v1_chr12_-_123717684 AK096541	-5151	-	DQ891281 DQ894468 BC034717 TSC_hg19_v1_chr12_-_123756363 AB006077 AF006484 NM_004642	33678	-	AY364255 AB014772 BC129949 BC133704 NM_001167856 NM_018183	112170	-	BC030544 TSC_hg19_v1_chr12_-_123849386 AK001695 AK307488	126578	-	NM_001143905|C12orf65|91574|chromosome 12 open reading frame 65##NM_152269|C12orf65|91574|chromosome 12 open reading frame 65##BC020885|C12orf65|91574|chromosome 12 open reading frame 65##BC062329|C12orf65|91574|chromosome 12 open reading frame 65##AF061733|C12orf65|91574|chromosome 12 open reading frame 65##AK025908|C12orf65|91574|chromosome 12 open reading frame 65##NM_001194995|C12orf65|91574|chromosome 12 open reading frame 65##BC018145|C12orf65|91574|chromosome 12 open reading frame 65##AK096541|MPHOSPH9|10198|M-phase phosphoprotein 9##DQ891281|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##DQ894468|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##BC034717|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##AB006077|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##AF006484|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##NM_004642|CDK2AP1|8099|cyclin-dependent kinase 2 associated protein 1##AY364255|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AB014772|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##BC129949|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##BC133704|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##NM_001167856|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##NM_018183|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##BC030544|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AK001695|SBNO1|55206|strawberry notch homolog 1 (Drosophila)##AK307488|SBNO1|55206|strawberry notch homolog 1 (Drosophila)	0.998359	CTCF.p2:10:0.998
chr21	22376170	22376301	reg1023379.p1	6.236	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-5462	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-5545	+	TSC_hg19_v1_chr21_+_22370656 BC052946 NM_004540	-5593	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	3424833	+	TSC_hg19_v1_chr21_+_26934442 AF402776	4558237	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	4603580	-	BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##BC052946|NCAM2|4685|neural cell adhesion molecule 2##NM_004540|NCAM2|4685|neural cell adhesion molecule 2##AK124194|FLJ42200|400860|FLJ42200 protein##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39	1.20678	CTCF.p2:11:1.000	CTCF.p2:-48:0.207
chr2	170785079	170785208	reg1020248.p1	6.236	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-101185	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-103758	-	TSC_hg19_v1_chr2_+_170662051 M20328 M35261	-122999	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	249542	+	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	786715	+	TSC_hg19_v1_chr2_+_171571942 AB464708	786834	+	NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##M20328|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##M35261|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor	0.928529	CTCF.p2:-38:0.929
chr7	37238585	37238705	reg1022843.p2	6.236	+	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	-212925	-	BC064635 NM_001039459	-213955	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-474569	-	AK291784 NM_001206482	154626	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	249823	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	249910	-	D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1	0.985916	CTCF.p2:5:0.986
chr9	92025729	92025883	reg1021762.p2	6.236	+	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-92388	+	TSC_hg19_v1_chr9_+_91926112 NM_001827 X54942 BC006458 AB527990 BT006630 CR407630 CR542118	-99648	+	BC026314 NM_016848 TSC_hg19_v1_chr9_-_91793734	-232096	-	BC054500 NM_001142287 NM_006378	68804	-	BX648216 TSC_hg19_v1_chr9_-_92113005	87201	-	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	194175	+	AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2##X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma	0.0	
chr11	66821465	66821588	reg1021078.p1	6.235	+	NM_177963 AK289672 AK289727 BC037406	-30674	+	AK315810 NM_001177880	-31337	+	AK026328 NM_001136485	-78776	+	TSC_hg19_v1_chr11_+_66824285 NM_014578	2760	+	TSC_hg19_v1_chr11_+_66824317 BC001338 AF498973 CU674656 DQ891124 DQ894303	2814	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	65213	+	NM_177963|SYT12|91683|synaptotagmin XII##AK289672|SYT12|91683|synaptotagmin XII##AK289727|SYT12|91683|synaptotagmin XII##BC037406|SYT12|91683|synaptotagmin XII##AK315810|SYT12|91683|synaptotagmin XII##NM_001177880|SYT12|91683|synaptotagmin XII##AK026328|C11orf86|254439|chromosome 11 open reading frame 86##NM_001136485|C11orf86|254439|chromosome 11 open reading frame 86##NM_014578|RHOD|29984|ras homolog gene family, member D##BC001338|RHOD|29984|ras homolog gene family, member D##AF498973|RHOD|29984|ras homolog gene family, member D##DQ891124|RHOD|29984|ras homolog gene family, member D##DQ894303|RHOD|29984|ras homolog gene family, member D##BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A	0.955054	CTCF.p2:-26:0.955
chr13	74296419	74296579	reg1023634.p1	6.235	+	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-663295	+	TSC_hg19_v1_chr13_+_73356270 NM_006346 AK309828 BC006009 BC008432 BC041806 BC051911 AY370776 AY375528	-940189	+	BC056143 TSC_hg19_v1_chr13_-_73356083 AK314715 BC038101 NM_001128226 NM_014953	-940293	-	AF161471 AF113122 NM_007249	411490	-	TSC_hg19_v1_chr13_-_74708425 AK291397	411897	-	CR749622 TSC_hg19_v1_chr13_-_75901948	1605423	-	AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_006346|PIBF1|10464|progesterone immunomodulatory binding factor 1##AK309828|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC006009|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC008432|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC041806|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC051911|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY370776|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY375528|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC056143|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AK314715|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##BC038101|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_001128226|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_014953|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK291397|KLF12|11278|Kruppel-like factor 12##CR749622|TBC1D4|9882|TBC1 domain family, member 4	0.963539	CTCF.p2:2:0.964
chr13	92033774	92033884	reg1023349.p1	6.235	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3708960	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5660390	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7577329	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	17075	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1845598	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3097997	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.064638	
chr3	158250027	158250152	reg1021577.p1	6.235	+	TSC_hg19_v1_chr3_+_157827937 AK300388	-422149	+	TSC_hg19_v1_chr3_+_157827910 AK290334 BC006982 NM_016625 AF208853 BC010357	-422198	+	HQ258019 AJ002367 TSC_hg19_v1_chr3_-_157823847 BC008829 NM_001163678 NM_003030 NM_006884	-426206	-	NM_001130156 NM_001130157 NM_001195432 NM_001195433 NM_001195434 NM_022443 AK056948 AK315402 BC095437 BX647666 AY848700 AY848701 AY848702 BC007045 L49054 AK297488 AK096889	38908	+	TSC_hg19_v1_chr3_+_158362361 AF309777 AF367998 AK000780 NM_024996 BC049210	112240	+	TSC_hg19_v1_chr3_+_158362373 AK315031	112292	+	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1##AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1##NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1##AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1##HQ258019|SHOX2|6474|short stature homeobox 2##AJ002367|SHOX2|6474|short stature homeobox 2##BC008829|SHOX2|6474|short stature homeobox 2##NM_001163678|SHOX2|6474|short stature homeobox 2##NM_003030|SHOX2|6474|short stature homeobox 2##NM_006884|SHOX2|6474|short stature homeobox 2##NM_001130156|MLF1|4291|myeloid leukemia factor 1##NM_001130157|MLF1|4291|myeloid leukemia factor 1##NM_001195432|MLF1|4291|myeloid leukemia factor 1##NM_001195433|MLF1|4291|myeloid leukemia factor 1##NM_001195434|MLF1|4291|myeloid leukemia factor 1##NM_022443|MLF1|4291|myeloid leukemia factor 1##AK056948|MLF1|4291|myeloid leukemia factor 1##AK315402|MLF1|4291|myeloid leukemia factor 1##BC095437|MLF1|4291|myeloid leukemia factor 1##BX647666|MLF1|4291|myeloid leukemia factor 1##AY848700|MLF1|4291|myeloid leukemia factor 1##AY848701|MLF1|4291|myeloid leukemia factor 1##AY848702|MLF1|4291|myeloid leukemia factor 1##BC007045|MLF1|4291|myeloid leukemia factor 1##L49054|MLF1|4291|myeloid leukemia factor 1##AK297488|MLF1|4291|myeloid leukemia factor 1##AK096889|MLF1|4291|myeloid leukemia factor 1##AF309777|GFM1|85476|G elongation factor, mitochondrial 1##AF367998|GFM1|85476|G elongation factor, mitochondrial 1##AK000780|GFM1|85476|G elongation factor, mitochondrial 1##NM_024996|GFM1|85476|G elongation factor, mitochondrial 1##BC049210|GFM1|85476|G elongation factor, mitochondrial 1##AK315031|GFM1|85476|G elongation factor, mitochondrial 1	0.630059	CTCF.p2:8:0.630
chr6	34217122	34217303	reg1005559.p3	6.234	+	TSC_hg19_v1_chr6_-_34216832 BC009526 NM_001008703 NM_001008704 NM_178508	-349	-	BC047919 TSC_hg19_v1_chr6_-_34216784 BC023627 AK290164	-419	-	AK311680 TSC_hg19_v1_chr6_+_34216344	-862	+	TSC_hg19_v1_chr6_-_34360182 AB463951 BT019984 BT019985 DQ893118 DQ896391 AF062529 AF062530	142989	-	TSC_hg19_v1_chr6_-_34360360 AK313440	143123	-	TSC_hg19_v1_chr6_-_34360425 BC007727	143208	-	BC009526|C6orf1|221491|chromosome 6 open reading frame 1##NM_001008703|C6orf1|221491|chromosome 6 open reading frame 1##NM_001008704|C6orf1|221491|chromosome 6 open reading frame 1##NM_178508|C6orf1|221491|chromosome 6 open reading frame 1##BC047919|C6orf1|221491|chromosome 6 open reading frame 1##BC023627|C6orf1|221491|chromosome 6 open reading frame 1##AK290164|C6orf1|221491|chromosome 6 open reading frame 1##BT019984|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##BT019985|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##DQ893118|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##DQ896391|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AF062529|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AF062530|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AK313440|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##BC007727|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3	0.0	
chr2	88607461	88607578	reg1022588.p1	6.233	+	NM_018271 BC050699 BC035315 AK001778	-134763	+	NM_001244676 NM_001244678 AK289486 AK315831 BC064423	-137655	+	CR542090 AB527938 M10617 BC032801 M10050 TSC_hg19_v1_chr2_-_88427582 BC022287 NM_001443	-179927	-	NM_001135649	144533	-	AK058098 NM_152670 BC029522	216665	+	AF110146 BC126354 BC126356 AK128659 TSC_hg19_v1_chr2_-_88926983 AK315287 AF193339 NM_004836	319459	-	NM_018271|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC050699|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC035315|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK001778|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001244676|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001244678|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK289486|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK315831|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC064423|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##CR542090|FABP1|2168|fatty acid binding protein 1, liver##M10617|FABP1|2168|fatty acid binding protein 1, liver##BC032801|FABP1|2168|fatty acid binding protein 1, liver##M10050|FABP1|2168|fatty acid binding protein 1, liver##BC022287|FABP1|2168|fatty acid binding protein 1, liver##NM_001443|FABP1|2168|fatty acid binding protein 1, liver##NM_001135649|FOXI3|344167|forkhead box I3##AK058098|C2orf51|200523|chromosome 2 open reading frame 51##NM_152670|C2orf51|200523|chromosome 2 open reading frame 51##BC029522|C2orf51|200523|chromosome 2 open reading frame 51##AF110146|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126354|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126356|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK128659|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK315287|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AF193339|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##NM_004836|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3	0.999473	CTCF.p2:28:0.999
chr3	4626264	4626421	reg1022967.p1	6.233	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-91146	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-91214	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-91311	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	394774	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	394839	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	395012	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.0	
chr13	100088993	100089171	reg1000265.p1	6.232	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-129384	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-178468	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-235963	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	64618	+	TSC_hg19_v1_chr13_+_100153777 BC130293	64700	+	BC041830 TSC_hg19_v1_chr13_+_100229390	140295	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.0	
chr3	161126944	161127066	reg1022652.p2	6.232	+	AF458592 BC037817 NM_001040100	-37197	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-187884	+	AK225664 TSC_hg19_v1_chr3_+_160939097	-187909	+	NM_001080440	87590	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	3669273	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	3787500	-	AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK225664|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_001080440|OTOL1|131149|otolin 1##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3	0.167021	
chr3	167458912	167459016	reg1021423.p1	6.232	+	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-5475	+	BC002506 NM_007217 AF022385 NM_145860 TSC_hg19_v1_chr3_-_167452681 BC016353 NM_145859 AK291130	-6313	-	TSC_hg19_v1_chr3_-_167371732 AK097556	-87241	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	354151	-	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	354467	-	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	1405115	-	NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC002506|PDCD10|11235|programmed cell death 10##NM_007217|PDCD10|11235|programmed cell death 10##AF022385|PDCD10|11235|programmed cell death 10##NM_145860|PDCD10|11235|programmed cell death 10##BC016353|PDCD10|11235|programmed cell death 10##NM_145859|PDCD10|11235|programmed cell death 10##AK291130|PDCD10|11235|programmed cell death 10##AK097556|WDR49|151790|WD repeat domain 49##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus	0.04822	
chr1	13681068	13681170	reg1023022.p1	6.231	+	NM_001099854	-7609	-	AK124292 NM_001010890 NM_001098376 BC101343 BC137391 BC171794	-39140	+	BC140755 NM_001012276	-69579	-	NM_001099790 NM_001099850	17285	-	NM_001099851 BC144662 BC146858	34970	+	NM_001099852	55787	+	NM_001099854|PRAMEF14|729528|PRAME family member 14##AK124292|PRAMEF9|343070|PRAME family member 9##NM_001010890|PRAMEF9|343070|PRAME family member 9##NM_001098376|PRAMEF15|653619|PRAME family member 15##BC101343|PRAMEF9|343070|PRAME family member 9##BC137391|PRAMEF9|343070|PRAME family member 9##BC171794|PRAMEF9|343070|PRAME family member 9##BC140755|PRAMEF7|441871|PRAME family member 7##NM_001012276|PRAMEF8|391002|PRAME family member 8##NM_001099790|PRAMEF19|645414|PRAME family member 19##NM_001099850|PRAMEF18|391003|PRAME family member 18##NM_001099851|PRAMEF17|391004|PRAME family member 17##BC144662|PRAMEF17|391004|PRAME family member 17##BC146858|PRAMEF17|391004|PRAME family member 17##NM_001099852|PRAMEF20|645425|PRAME family member 20	0.956843	CTCF.p2:5:0.957
chr21	45533994	45534146	reg1023139.p1	6.231	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-6771	+	TSC_hg19_v1_chr21_+_45527253 U56085	-6813	+	TSC_hg19_v1_chr21_+_45527251 NM_005049	-6842	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	19435	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	19491	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	126696	-	U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##U56085|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##NM_005049|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand	0.961547	CTCF.p2:-11:0.949
chr8	33403363	33403476	reg1024681.p1	6.231	+	AK026916 TSC_hg19_v1_chr8_-_33370644 BX648410 BC007387 BC066935 NM_025115 NM_001102401	-32792	-	NM_032509 TSC_hg19_v1_chr8_+_33342703 AK314491 AK225476 AK027469 BC015965 AF251062 BC039740 BC028230 BC050528 CU690708	-60715	+	AK098505 AK297132 TSC_hg19_v1_chr8_-_33330636 AK303231 AJ512465 AJ535838 AJ535839 AK292993 AJ582015 NM_032664	-72773	-	AK022588 NM_024787 TSC_hg19_v1_chr8_-_33424647	21244	-	TSC_hg19_v1_chr8_-_33457295 BC067804	53868	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	54040	-	AK026916|TTI2|80185|TELO2 interacting protein 2##BX648410|TTI2|80185|TELO2 interacting protein 2##BC007387|TTI2|80185|TELO2 interacting protein 2##BC066935|TTI2|80185|TELO2 interacting protein 2##NM_025115|TTI2|80185|TELO2 interacting protein 2##NM_001102401|TTI2|80185|TELO2 interacting protein 2##NM_032509|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK314491|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK225476|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK027469|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC015965|MAK16|84549|MAK16 homolog (S. cerevisiae)##AF251062|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC039740|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC028230|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC050528|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK098505|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK297132|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK303231|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ512465|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535838|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535839|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK292993|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ582015|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032664|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK022588|RNF122|79845|ring finger protein 122##NM_024787|RNF122|79845|ring finger protein 122##BC067804|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)	0.0	
chr12	109831674	109831785	reg1023032.p2	6.230	+	NM_001101421	-5206	+	AK131519 BC113073 BC146825 NM_213596 TSC_hg19_v1_chr12_-_109747027	-84696	-	TSC_hg19_v1_chr12_+_109665176 U34591	-166511	+	AF113208 BC040062 TSC_hg19_v1_chr12_-_109915106 AK056912 AK222548	83378	-	TSC_hg19_v1_chr12_-_109915133 AK092170 AX747390 AK027543 AY205299 NM_031954	83413	-	TSC_hg19_v1_chr12_+_109915438 BX537403 NM_130466 NM_183415 AK307385	83707	+	NM_001101421|MYO1H|283446|myosin IH##AK131519|FOXN4|121643|forkhead box N4##BC113073|FOXN4|121643|forkhead box N4##BC146825|FOXN4|121643|forkhead box N4##NM_213596|FOXN4|121643|forkhead box N4##U34591|ACACB|32|acetyl-CoA carboxylase beta##AF113208|KCTD10|83892|potassium channel tetramerisation domain containing 10##BC040062|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK056912|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK222548|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK092170|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK027543|KCTD10|83892|potassium channel tetramerisation domain containing 10##AY205299|KCTD10|83892|potassium channel tetramerisation domain containing 10##NM_031954|KCTD10|83892|potassium channel tetramerisation domain containing 10##BX537403|UBE3B|89910|ubiquitin protein ligase E3B##NM_130466|UBE3B|89910|ubiquitin protein ligase E3B##NM_183415|UBE3B|89910|ubiquitin protein ligase E3B##AK307385|UBE3B|89910|ubiquitin protein ligase E3B	0.997422	CTCF.p2:6:0.997
chr12	53552985	53553140	reg1002026.p1	6.230	+	TSC_hg19_v1_chr12_+_53497289 AF059203 BC096090 BC096091 BC096092 BC099626 AF099031	-55738	+	NM_003578 TSC_hg19_v1_chr12_+_53497278	-55787	+	M62402 TSC_hg19_v1_chr12_+_53491450 AK313158 BC003507 BC011708 BC005007 DQ892995 DQ896243 AB528507 CR541791 M69054	-61585	+	AB044561 NM_001244706	5214	-	AF116545 AF116546 AF116547 AF116548 BC018042 AK315265 BC047466 NM_015989	21342	-	TSC_hg19_v1_chr12_+_53574505 AK292744	21429	+	AF059203|SOAT2|8435|sterol O-acyltransferase 2##BC096090|SOAT2|8435|sterol O-acyltransferase 2##BC096091|SOAT2|8435|sterol O-acyltransferase 2##BC096092|SOAT2|8435|sterol O-acyltransferase 2##BC099626|SOAT2|8435|sterol O-acyltransferase 2##AF099031|SOAT2|8435|sterol O-acyltransferase 2##NM_003578|SOAT2|8435|sterol O-acyltransferase 2##M62402|IGFBP6|3489|insulin-like growth factor binding protein 6##AK313158|IGFBP6|3489|insulin-like growth factor binding protein 6##BC003507|IGFBP6|3489|insulin-like growth factor binding protein 6##BC011708|IGFBP6|3489|insulin-like growth factor binding protein 6##BC005007|IGFBP6|3489|insulin-like growth factor binding protein 6##DQ892995|IGFBP6|3489|insulin-like growth factor binding protein 6##DQ896243|IGFBP6|3489|insulin-like growth factor binding protein 6##CR541791|IGFBP6|3489|insulin-like growth factor binding protein 6##M69054|IGFBP6|3489|insulin-like growth factor binding protein 6##AB044561|CSAD|51380|cysteine sulfinic acid decarboxylase##NM_001244706|CSAD|51380|cysteine sulfinic acid decarboxylase##AF116545|CSAD|51380|cysteine sulfinic acid decarboxylase##AF116546|CSAD|51380|cysteine sulfinic acid decarboxylase##AF116547|CSAD|51380|cysteine sulfinic acid decarboxylase##AF116548|CSAD|51380|cysteine sulfinic acid decarboxylase##BC018042|CSAD|51380|cysteine sulfinic acid decarboxylase##AK315265|CSAD|51380|cysteine sulfinic acid decarboxylase##BC047466|CSAD|51380|cysteine sulfinic acid decarboxylase##NM_015989|CSAD|51380|cysteine sulfinic acid decarboxylase##AK292744|ZNF740|283337|zinc finger protein 740	0.974059	CTCF.p2:-22:0.974
chr2	224557201	224557321	reg1023019.p2	6.230	+	TSC_hg19_v1_chr2_-_224467145 NM_003469	-90082	-	TSC_hg19_v1_chr2_-_224467100 BC022509	-90154	-	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	-90195	-	AF393369 BC021898 TSC_hg19_v1_chr2_-_224702284 AK025338 AK299026	144988	-	TSC_hg19_v1_chr2_-_224702300 BC009606 NM_001039569	145049	-	TSC_hg19_v1_chr2_-_224810010 AF411977 AB527455 CU691898	252732	-	NM_003469|SCG2|7857|secretogranin II##BC022509|SCG2|7857|secretogranin II##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II##AF393369|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##BC021898|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK025338|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK299026|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##BC009606|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##NM_001039569|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AF411977|WDFY1|57590|WD repeat and FYVE domain containing 1	0.699892	CTCF.p2:3:0.700
chr12	16838156	16838274	reg1020744.p1	6.229	+	AF258348 BC017777 AB044746 AK095595 AK308826 NM_001001395 NM_001243609	-77174	-	AK308594 AK294909 NM_001243613	-78204	-	BC050085 NM_001243610	-78482	-	AK026308 BC042888 NM_024730	1404867	-	NM_004570	1576258	+	AF532185 NM_033123 AK314516 AY035866 AK292279	2052738	-	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC050085|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243610|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK026308|RERGL|79785|RERG/RAS-like##BC042888|RERGL|79785|RERG/RAS-like##NM_024730|RERGL|79785|RERG/RAS-like##NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1	0.0	
chr13	60051274	60051428	reg1024901.p1	6.229	+	TSC_hg19_v1_chr13_+_58207858 AK307545	-1843455	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	-1845404	+	NM_001040429	-1845563	+	BC041395 TSC_hg19_v1_chr13_-_60325215	273793	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	535969	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	686630	-	AK307545|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##NM_001040429|PCDH17|27253|protocadherin 17##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	0.0	
chr15	37426937	37427074	reg1023493.p2	6.229	+	TSC_hg19_v1_chr15_-_37393466 BC050431 NM_001220482 NM_002399 BC001516 BC001844 BC007202 AK300247	-33563	-	TSC_hg19_v1_chr15_-_37392751 AK056216 NM_170674 NM_170675 NM_170676 NM_170677	-34449	-	TSC_hg19_v1_chr15_-_37392322 AK226072	-34674	-	BC029221 NM_152453	800451	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	1117390	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	1118017	+	BC050431|MEIS2|4212|Meis homeobox 2##NM_001220482|MEIS2|4212|Meis homeobox 2##NM_002399|MEIS2|4212|Meis homeobox 2##BC001516|MEIS2|4212|Meis homeobox 2##BC001844|MEIS2|4212|Meis homeobox 2##BC007202|MEIS2|4212|Meis homeobox 2##AK300247|MEIS2|4212|Meis homeobox 2##AK056216|MEIS2|4212|Meis homeobox 2##NM_170674|MEIS2|4212|Meis homeobox 2##NM_170675|MEIS2|4212|Meis homeobox 2##NM_170676|MEIS2|4212|Meis homeobox 2##NM_170677|MEIS2|4212|Meis homeobox 2##AK226072|MEIS2|4212|Meis homeobox 2##BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1	0.585439	CTCF.p2:-2:0.585
chr17	48350636	48350757	reg1017133.p2	6.229	+	AY358204 NM_001168215	-1930	+	TSC_hg19_v1_chr17_-_48278993 BC036531 Z74615 NM_000088	-71703	-	AB384988 DQ893571 EU176569 CU691368 M36546 X07884 AB209597 TSC_hg19_v1_chr17_-_48278986	-71766	-	NM_153229 AK090637 AX746552 BC064507	1127	+	TSC_hg19_v1_chr17_+_48423495 AJ277442 NM_022167 BC052262 AK299999 BC036069 AY358090	72770	+	BC001066 AB049647 TSC_hg19_v1_chr17_-_48450546 AK023576 BC021986 AF151084 AK315758 NM_016504	99850	-	AY358204|TMEM92|162461|transmembrane protein 92##NM_001168215|TMEM92|162461|transmembrane protein 92##BC036531|COL1A1|1277|collagen, type I, alpha 1##Z74615|COL1A1|1277|collagen, type I, alpha 1##NM_000088|COL1A1|1277|collagen, type I, alpha 1##DQ893571|COL1A1|1277|collagen, type I, alpha 1##EU176569|COL1A1|1277|collagen, type I, alpha 1##M36546|COL1A1|1277|collagen, type I, alpha 1##X07884|COL1A1|1277|collagen, type I, alpha 1##AB209597|COL1A1|1277|collagen, type I, alpha 1##NM_153229|TMEM92|162461|transmembrane protein 92##AK090637|TMEM92|162461|transmembrane protein 92##BC064507|TMEM92|162461|transmembrane protein 92##AJ277442|XYLT2|64132|xylosyltransferase II##NM_022167|XYLT2|64132|xylosyltransferase II##BC052262|XYLT2|64132|xylosyltransferase II##AK299999|XYLT2|64132|xylosyltransferase II##BC036069|XYLT2|64132|xylosyltransferase II##AY358090|XYLT2|64132|xylosyltransferase II##BC001066|MRPL27|51264|mitochondrial ribosomal protein L27##AB049647|MRPL27|51264|mitochondrial ribosomal protein L27##AK023576|MRPL27|51264|mitochondrial ribosomal protein L27##BC021986|MRPL27|51264|mitochondrial ribosomal protein L27##AF151084|MRPL27|51264|mitochondrial ribosomal protein L27##AK315758|MRPL27|51264|mitochondrial ribosomal protein L27##NM_016504|MRPL27|51264|mitochondrial ribosomal protein L27	0.997361	CTCF.p2:-7:0.997
chr19	39048023	39048177	reg1017954.p2	6.229	+	TSC_hg19_v1_chr19_+_38924330 NM_000540 NM_001042723 J05200	-123756	+	AF448437 BC146669 BC150202 BC142721 BC151216 TSC_hg19_v1_chr19_-_38916860 AX721071 AY048119 AY048120 AY048121 FJ768677 FJ768678 FJ768679 FJ768680 FJ768681 FJ768682 NM_001146202 NM_001146203 NM_001146204 NM_001146205 NM_001146206 NM_001146207 NM_170604	-131228	-	TSC_hg19_v1_chr19_+_38893839 BC080606 AK128745	-154199	+	AB527182 TSC_hg19_v1_chr19_-_39108593 NM_001042600 NM_007181	60488	-	TSC_hg19_v1_chr19_+_39109725 NM_013234 AF077051 AF085358 AB019392 AY245432	61613	+	TSC_hg19_v1_chr19_+_39109825 BC007559 AK298635	61716	+	NM_000540|RYR1|6261|ryanodine receptor 1 (skeletal)##NM_001042723|RYR1|6261|ryanodine receptor 1 (skeletal)##J05200|RYR1|6261|ryanodine receptor 1 (skeletal)##AF448437|RASGRP4|115727|RAS guanyl releasing protein 4##BC146669|RASGRP4|115727|RAS guanyl releasing protein 4##BC150202|RASGRP4|115727|RAS guanyl releasing protein 4##BC142721|RASGRP4|115727|RAS guanyl releasing protein 4##BC151216|RASGRP4|115727|RAS guanyl releasing protein 4##AY048119|RASGRP4|115727|RAS guanyl releasing protein 4##AY048120|RASGRP4|115727|RAS guanyl releasing protein 4##AY048121|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768677|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768678|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768679|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768680|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768681|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768682|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146202|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146203|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146204|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146205|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146206|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146207|RASGRP4|115727|RAS guanyl releasing protein 4##NM_170604|RASGRP4|115727|RAS guanyl releasing protein 4##BC080606|FAM98C|147965|family with sequence similarity 98, member C##AK128745|FAM98C|147965|family with sequence similarity 98, member C##NM_001042600|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_007181|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_013234|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF077051|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF085358|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AB019392|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AY245432|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##BC007559|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK298635|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K	0.140304	
chr9	33778864	33779011	reg1027355.p1	6.229	+	AB298285 NM_001197097 NM_007343 AB528734 X71345 X72781 TSC_hg19_v1_chr9_+_33750676 BC030238 AY052783 AB298286 NM_001197098	-28297	+	TSC_hg19_v1_chr9_+_33624216 M62898	-154719	+	NM_001244752	-254527	+	BC069476 BC069494 NM_002771 X15505 D45417	16627	+	TSC_hg19_v1_chr9_+_33817170 NM_017811	38247	+	TSC_hg19_v1_chr9_+_33817325 BC047584 AK000426 BC004862 AK225880	38457	+	AB298285|PRSS3|5646|protease, serine, 3##NM_001197097|PRSS3|5646|protease, serine, 3##NM_007343|PRSS3|5646|protease, serine, 3##X71345|PRSS3|5646|protease, serine, 3##X72781|PRSS3|5646|protease, serine, 3##BC030238|PRSS3|5646|protease, serine, 3##AY052783|PRSS3|5646|protease, serine, 3##AB298286|PRSS3|5646|protease, serine, 3##NM_001197098|PRSS3|5646|protease, serine, 3##M62898|ANXA2P2|304|annexin A2 pseudogene 2##NM_001244752|ANKRD18B|441459|ankyrin repeat domain 18B##BC069476|PRSS3|5646|protease, serine, 3##BC069494|PRSS3|5646|protease, serine, 3##NM_002771|PRSS3|5646|protease, serine, 3##X15505|PRSS3|5646|protease, serine, 3##D45417|PRSS3|5646|protease, serine, 3##NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC047584|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK000426|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC004862|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK225880|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2	0.880067	CTCF.p2:1:0.880
chr11	66360310	66360451	reg1022090.p1	6.228	+	DQ893245 AJ007331 TSC_hg19_v1_chr11_-_66336078 AK313657 BC036451 AF136279 BC011682 BC013359 AF088886 NM_003793	-24355	-	AK313556 BC096323 BC099647 BC099648 BC099649 M86407 NM_001104	-45999	+	TSC_hg19_v1_chr11_-_66313539 AY358448 NM_207340 AK301787 AK310561	-46773	-	CU689898 TSC_hg19_v1_chr11_-_66360516 AK001648 BC034469 NM_018219	141	-	TSC_hg19_v1_chr11_+_66360672 AY113179 AF002210 NM_005125 BC105016 BC112055 CR541928	318	+	NM_001198836 NM_001198837 NM_001198845 NM_001198846 NM_006328 TSC_hg19_v1_chr11_+_66384100 AF315632 AF315633 EU287938 AK222830 AK297907 AK307254 AK021768 AK292805 AF080561 BC000488 BC023619 DQ294957 EU287939 EU446504	23741	+	DQ893245|CTSF|8722|cathepsin F##AJ007331|CTSF|8722|cathepsin F##AK313657|CTSF|8722|cathepsin F##BC036451|CTSF|8722|cathepsin F##AF136279|CTSF|8722|cathepsin F##BC011682|CTSF|8722|cathepsin F##BC013359|CTSF|8722|cathepsin F##AF088886|CTSF|8722|cathepsin F##NM_003793|CTSF|8722|cathepsin F##AK313556|ACTN3|89|actinin, alpha 3##BC096323|ACTN3|89|actinin, alpha 3##BC099647|ACTN3|89|actinin, alpha 3##BC099648|ACTN3|89|actinin, alpha 3##BC099649|ACTN3|89|actinin, alpha 3##M86407|ACTN3|89|actinin, alpha 3##NM_001104|ACTN3|89|actinin, alpha 3##AY358448|ZDHHC24|254359|zinc finger, DHHC-type containing 24##NM_207340|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AK301787|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AK310561|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AK001648|CCDC87|55231|coiled-coil domain containing 87##BC034469|CCDC87|55231|coiled-coil domain containing 87##NM_018219|CCDC87|55231|coiled-coil domain containing 87##AY113179|CCS|9973|copper chaperone for superoxide dismutase##AF002210|CCS|9973|copper chaperone for superoxide dismutase##NM_005125|CCS|9973|copper chaperone for superoxide dismutase##BC105016|CCS|9973|copper chaperone for superoxide dismutase##BC112055|CCS|9973|copper chaperone for superoxide dismutase##CR541928|CCS|9973|copper chaperone for superoxide dismutase##NM_001198836|RBM14|10432|RNA binding motif protein 14##NM_001198837|RBM14|10432|RNA binding motif protein 14##NM_001198845|RBM14-RBM4|100526737|RBM14-RBM4 readthrough##NM_001198846|RBM14-RBM4|100526737|RBM14-RBM4 readthrough##NM_006328|RBM14|10432|RNA binding motif protein 14##AF315632|RBM14|10432|RNA binding motif protein 14##AF315633|RBM14|10432|RNA binding motif protein 14##AK222830|RBM14|10432|RNA binding motif protein 14##AK021768|RBM14|10432|RNA binding motif protein 14##AF080561|RBM14|10432|RNA binding motif protein 14##BC000488|RBM14|10432|RNA binding motif protein 14##BC023619|RBM14|10432|RNA binding motif protein 14##DQ294957|RBM14|10432|RNA binding motif protein 14##EU446504|RBM14|10432|RNA binding motif protein 14	0.10217	
chr16	83389937	83390060	reg1023246.p2	6.227	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-729329	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	-729409	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	-729604	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	451602	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	451658	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	542771	+	AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase	0.017819	
chr6	87739607	87739712	reg1021301.p1	6.227	+	NM_000865	-92636	+	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	-1351222	-	TSC_hg19_v1_chr6_-_86353055 AF037448 NM_001159677 NM_006372	-1386634	-	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	65159	-	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	125630	+	TSC_hg19_v1_chr6_+_87964930 AL832366	225321	+	NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##AF037448|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159677|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_006372|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292##AL832366|ZNF292|23036|zinc finger protein 292	0.998279	CTCF.p2:-18:0.998
chr9	19946597	19946708	reg1021607.p1	6.227	+	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-159701	-	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-537649	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-566425	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	675796	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	675844	-	AK056522 AY139834 NM_017794	711655	+	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797	0.837797	CTCF.p2:7:0.838
chr10	29666437	29666558	reg1023817.p1	6.226	+	NM_032517 BC021730 AY358694	-88481	+	TSC_hg19_v1_chr10_+_28966451 NM_012342 AK290639 BC019252 AK223065 U23070	-700050	+	TSC_hg19_v1_chr10_+_28878692 BC010356	-787791	+	TSC_hg19_v1_chr10_+_29698475 BC066966 BC050354	31972	+	BC107795 AK056080 TSC_hg19_v1_chr10_+_29698485	31988	+	TSC_hg19_v1_chr10_+_29698496 BC073888	32001	+	NM_032517|LYZL1|84569|lysozyme-like 1##BC021730|LYZL1|84569|lysozyme-like 1##AY358694|LYZL1|84569|lysozyme-like 1##NM_012342|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK290639|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC019252|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK223065|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##U23070|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC010356|WAC|51322|WW domain containing adaptor with coiled-coil##BC066966|LOC387647|387647|patched domain containing 3 pseudogene##BC050354|LOC387647|387647|patched domain containing 3 pseudogene##BC107795|LOC387647|387647|patched domain containing 3 pseudogene##AK056080|LOC387647|387647|patched domain containing 3 pseudogene##BC073888|LOC387647|387647|patched domain containing 3 pseudogene	0.98987	CTCF.p2:-17:0.990
chr11	76750599	76750692	reg1023655.p2	6.226	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	-5186	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	-178652	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	-178713	+	TSC_hg19_v1_chr11_+_76778017 BC018123 NM_004055 AK128124 AK313132 AK310978 AK094150 AB209087	27382	+	CU686775 BC069115 BC069365 NM_006189	63239	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	88683	+	NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##BC018123|CAPN5|726|calpain 5##NM_004055|CAPN5|726|calpain 5##AK128124|CAPN5|726|calpain 5##AK313132|CAPN5|726|calpain 5##AK310978|CAPN5|726|calpain 5##AK094150|CAPN5|726|calpain 5##AB209087|CAPN5|726|calpain 5##BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA	0.718554	CTCF.p2:2:0.719
chr14	89897159	89897328	reg1021670.p1	6.226	+	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	-13833	-	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-18467	-	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-606250	+	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	188352	-	BC001787 BX247991 AK298930 AK094740 NM_145231	523817	-	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	525003	+	BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1	0.015124	
chr17	80308248	80308350	reg1019035.p1	6.226	+	TSC_hg19_v1_chr17_-_80291903 NM_003004	-16388	-	TSC_hg19_v1_chr17_-_80291859 AK290708	-16453	-	AK312980 U77643 TSC_hg19_v1_chr17_-_80291643 AK223104	-16653	-	BC036191 NM_207459 AK093086 AX747912 BC057820 BC050391	8834	+	BC136490 NM_018949 TSC_hg19_v1_chr17_+_80332304	23931	+	TSC_hg19_v1_chr17_+_80376228 NM_173620	67943	+	NM_003004|SECTM1|6398|secreted and transmembrane 1##AK290708|SECTM1|6398|secreted and transmembrane 1##AK312980|SECTM1|6398|secreted and transmembrane 1##U77643|SECTM1|6398|secreted and transmembrane 1##AK223104|SECTM1|6398|secreted and transmembrane 1##BC036191|TEX19|400629|testis expressed 19##NM_207459|TEX19|400629|testis expressed 19##AK093086|TEX19|400629|testis expressed 19##BC057820|TEX19|400629|testis expressed 19##BC050391|TEX19|400629|testis expressed 19##BC136490|UTS2R|2837|urotensin 2 receptor##NM_018949|UTS2R|2837|urotensin 2 receptor##NM_173620|HEXDC|284004|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing	0.631616	CTCF.p2:-4:0.480
chr3	122024827	122024955	reg1023380.p1	6.226	+	NM_001178065 U20760	-121711	+	NM_000388 U20759	-122362	+	NM_006889 NM_176892 U04343	-228169	+	NM_005213 AK291308 BC010379 X05978 CR456914	19183	+	BC019231 BC109378 TSC_hg19_v1_chr3_-_122102079 BC054051 BC062725 NM_001017928	77186	-	NM_014367 AK026030 BC010896 BC015060 AF201944 AF107495 AF250321 TSC_hg19_v1_chr3_+_122103076 AK293994 AF191020	78177	+	NM_001178065|CASR|846|calcium-sensing receptor##U20760|CASR|846|calcium-sensing receptor##NM_000388|CASR|846|calcium-sensing receptor##U20759|CASR|846|calcium-sensing receptor##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule##NM_005213|CSTA|1475|cystatin A (stefin A)##AK291308|CSTA|1475|cystatin A (stefin A)##BC010379|CSTA|1475|cystatin A (stefin A)##X05978|CSTA|1475|cystatin A (stefin A)##CR456914|CSTA|1475|cystatin A (stefin A)##BC109378|CCDC58|131076|coiled-coil domain containing 58##BC054051|CCDC58|131076|coiled-coil domain containing 58##BC062725|CCDC58|131076|coiled-coil domain containing 58##NM_001017928|CCDC58|131076|coiled-coil domain containing 58##NM_014367|FAM162A|26355|family with sequence similarity 162, member A##AK026030|FAM162A|26355|family with sequence similarity 162, member A##BC010896|FAM162A|26355|family with sequence similarity 162, member A##BC015060|FAM162A|26355|family with sequence similarity 162, member A##AF201944|FAM162A|26355|family with sequence similarity 162, member A##AF107495|FAM162A|26355|family with sequence similarity 162, member A##AF250321|FAM162A|26355|family with sequence similarity 162, member A##AK293994|FAM162A|26355|family with sequence similarity 162, member A##AF191020|FAM162A|26355|family with sequence similarity 162, member A	0.976702	CTCF.p2:-30:0.977
chr12	131577677	131577811	reg1020277.p2	6.225	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-139291	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-221033	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-221119	+	TSC_hg19_v1_chr12_+_132195623 BC142980	617869	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	617912	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	735222	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.954866	CTCF.p2:4:0.955
chr12	56627488	56627581	reg1022227.p2	6.225	+	NM_001135195 AK172768 TSC_hg19_v1_chr12_+_56624545 BC027884	-2971	+	NM_173596 TSC_hg19_v1_chr12_+_56623836 AK298331 AK313188	-3697	+	BC006171 TSC_hg19_v1_chr12_+_56618157 AY203942	-9325	+	TSC_hg19_v1_chr12_-_56652169 NM_173595 AK098479 AB190990 AK125379	24615	-	TSC_hg19_v1_chr12_+_56660663 NM_144576	33097	+	TSC_hg19_v1_chr12_+_56660725 AK057003 BC073923	33212	+	NM_001135195|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##AK172768|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##BC027884|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##NM_173596|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##AK298331|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##AK313188|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##BC006171|OBFC2B|79035|oligonucleotide/oligosaccharide-binding fold containing 2B##AY203942|OBFC2B|79035|oligonucleotide/oligosaccharide-binding fold containing 2B##NM_173595|ANKRD52|283373|ankyrin repeat domain 52##AB190990|ANKRD52|283373|ankyrin repeat domain 52##AK125379|ANKRD52|283373|ankyrin repeat domain 52##NM_144576|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)##AK057003|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)##BC073923|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)	0.95103	CTCF.p2:-22:0.951
chr17	45924862	45924942	reg1020264.p1	6.225	+	TSC_hg19_v1_chr17_-_45918640 BC002980 AK303835 NM_001145023 NM_138355	-6233	-	TSC_hg19_v1_chr17_-_45918622 AK290646 BC017317 BC010408 AK308989	-6307	-	AK315665 NM_033413 AK292765 AK027206 BC010412	-15857	+	TSC_hg19_v1_chr17_-_45928530 AK127707	3642	-	BC103951 BC103952 BC103953 BC103954 AK127850 NM_199262	8286	-	TSC_hg19_v1_chr17_-_45973143 AK127217	48248	-	BC002980|SCRN2|90507|secernin 2##AK303835|SCRN2|90507|secernin 2##NM_001145023|SCRN2|90507|secernin 2##NM_138355|SCRN2|90507|secernin 2##AK290646|SCRN2|90507|secernin 2##BC017317|SCRN2|90507|secernin 2##BC010408|SCRN2|90507|secernin 2##AK308989|SCRN2|90507|secernin 2##AK315665|LRRC46|90506|leucine rich repeat containing 46##NM_033413|LRRC46|90506|leucine rich repeat containing 46##AK292765|LRRC46|90506|leucine rich repeat containing 46##AK027206|LRRC46|90506|leucine rich repeat containing 46##BC010412|LRRC46|90506|leucine rich repeat containing 46##AK127707|SP6|80320|Sp6 transcription factor##BC103951|SP6|80320|Sp6 transcription factor##BC103952|SP6|80320|Sp6 transcription factor##BC103953|SP6|80320|Sp6 transcription factor##BC103954|SP6|80320|Sp6 transcription factor##AK127850|SP6|80320|Sp6 transcription factor##NM_199262|SP6|80320|Sp6 transcription factor	0.190445	
chr4	105452677	105452829	reg1022139.p1	6.225	+	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	-36700	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	-40271	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-811853	-	BX640738 NM_017628	614278	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	615058	+	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	615291	+	AK127778|CXXC4|80319|CXXC finger protein 4##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2	0.419712	CTCF.p2:-5:0.420
chr10	33482388	33482524	reg1024955.p1	6.224	+	TSC_hg19_v1_chr10_-_33247203 NM_002211	-235219	-	TSC_hg19_v1_chr10_-_33247146 BC020057 AK291697 BX537407	-235317	-	TSC_hg19_v1_chr10_-_33246826 NM_133376	-235622	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	140997	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	141358	-	TSC_hg19_v1_chr10_-_33623996 BX648025	141542	-	NM_002211|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BC020057|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##AK291697|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BX537407|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##NM_133376|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##BX648025|NRP1|8829|neuropilin 1	0.977515	CTCF.p2:0:0.978
chr16	441948	442059	reg1020710.p1	6.224	+	DQ892035 DQ895226 BC021557 AB045292 TSC_hg19_v1_chr16_-_431979 NM_021259 AK091823	-10082	-	BX647501 BC013829 TSC_hg19_v1_chr16_-_420539 AK226042 AK096844 BC000507 AK315180 NM_006428	-21465	-	TSC_hg19_v1_chr16_-_402657 NM_003502 NM_181050	-39357	-	TSC_hg19_v1_chr16_+_447198 BC017067 NM_005009 BC004880 Y07604 AB528678 BT019438	5208	+	TSC_hg19_v1_chr16_+_451884 AK055839 NM_020664 BC010740 AK128012 AK225961 BC030226	9881	+	TSC_hg19_v1_chr16_+_451944 AJ293009 CU679809	9944	+	DQ892035|TMEM8A|58986|transmembrane protein 8A##DQ895226|TMEM8A|58986|transmembrane protein 8A##BC021557|TMEM8A|58986|transmembrane protein 8A##AB045292|TMEM8A|58986|transmembrane protein 8A##NM_021259|TMEM8A|58986|transmembrane protein 8A##AK091823|TMEM8A|58986|transmembrane protein 8A##BX647501|MRPL28|10573|mitochondrial ribosomal protein L28##BC013829|MRPL28|10573|mitochondrial ribosomal protein L28##AK226042|MRPL28|10573|mitochondrial ribosomal protein L28##AK096844|MRPL28|10573|mitochondrial ribosomal protein L28##BC000507|MRPL28|10573|mitochondrial ribosomal protein L28##AK315180|MRPL28|10573|mitochondrial ribosomal protein L28##NM_006428|MRPL28|10573|mitochondrial ribosomal protein L28##NM_003502|AXIN1|8312|axin 1##NM_181050|AXIN1|8312|axin 1##BC017067|NME4|4833|non-metastatic cells 4, protein expressed in##NM_005009|NME4|4833|non-metastatic cells 4, protein expressed in##BC004880|NME4|4833|non-metastatic cells 4, protein expressed in##Y07604|NME4|4833|non-metastatic cells 4, protein expressed in##BT019438|NME4|4833|non-metastatic cells 4, protein expressed in##AK055839|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##NM_020664|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##BC010740|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##AK128012|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##AK225961|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##BC030226|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##AJ293009|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal	0.0	
chr21	37885858	37885984	reg1018190.p2	6.224	+	AF314090 AY355348 NM_001146079 NM_144492	-33534	-	BC012126 NM_012130 AY355349	-47190	-	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	-128231	+	AJ566765 NM_001146078	28976	-	AJ566766 NM_001146077	62945	-	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	185519	+	AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AJ566765|CLDN14|23562|claudin 14##NM_001146078|CLDN14|23562|claudin 14##AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14	0.0	
chr2	72833117	72833229	reg1023298.p1	6.224	+	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	-458231	-	AK295683 TSC_hg19_v1_chr2_-_72371202	-461974	-	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-1139280	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	219931	-	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	281357	+	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	311480	+	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1	0.981353	CTCF.p2:0:0.981
chr3	178865079	178865199	reg1022893.p2	6.224	+	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	-75513	-	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	-75574	-	AF209747 NM_005832	-588587	+	TSC_hg19_v1_chr3_+_178866144 NM_006218 AK292940	1099	+	AF160968 NM_014407 BC113851	104270	-	NM_171830	104505	-	NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AF160968|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_014407|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##BC113851|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_171830|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3	0.645794	CTCF.p2:-24:0.646
chr3	87347385	87347520	reg1025226.p1	6.224	+	AB587506 L18781 X72215 X62429 D10216 NM_000306 NM_001122757	-21779	-	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	-70917	+	BC094780 TSC_hg19_v1_chr3_-_87040272	-307182	-	NM_000866	684273	+	BC052980 TSC_hg19_v1_chr3_-_88108150 AL117392 NM_001008390 NM_003663	760691	-	AF543494 NM_018293	840809	+	L18781|POU1F1|5449|POU class 1 homeobox 1##X72215|POU1F1|5449|POU class 1 homeobox 1##X62429|POU1F1|5449|POU class 1 homeobox 1##D10216|POU1F1|5449|POU class 1 homeobox 1##NM_000306|POU1F1|5449|POU class 1 homeobox 1##NM_001122757|POU1F1|5449|POU class 1 homeobox 1##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_000866|HTR1F|3355|5-hydroxytryptamine (serotonin) receptor 1F##BC052980|CGGBP1|8545|CGG triplet repeat binding protein 1##AL117392|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_001008390|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_003663|CGGBP1|8545|CGG triplet repeat binding protein 1##AF543494|ZNF654|55279|zinc finger protein 654##NM_018293|ZNF654|55279|zinc finger protein 654	0.998832	CTCF.p2:3:0.999
chr9	139258238	139258375	reg1023354.p1	6.224	+	NM_001080849 BC146915 BC146924 BC171835	-55	-	NM_001200003	-9055	+	NM_001145639	-10798	+	AF311287 AK292081 TSC_hg19_v1_chr9_-_139268093 AK295647 BC070091 AK309043	9785	-	BC035805 TSC_hg19_v1_chr9_-_139268130 BC008877 AK024001 NM_052813 NM_052814	9821	-	NM_003086	34582	-	NM_001080849|DNLZ|728489|DNL-type zinc finger##BC146915|DNLZ|728489|DNL-type zinc finger##BC146924|DNLZ|728489|DNL-type zinc finger##BC171835|DNLZ|728489|DNL-type zinc finger##NM_001200003|GPSM1|26086|G-protein signaling modulator 1##NM_001145639|GPSM1|26086|G-protein signaling modulator 1##AF311287|CARD9|64170|caspase recruitment domain family, member 9##AK292081|CARD9|64170|caspase recruitment domain family, member 9##AK295647|CARD9|64170|caspase recruitment domain family, member 9##AK309043|CARD9|64170|caspase recruitment domain family, member 9##BC035805|CARD9|64170|caspase recruitment domain family, member 9##BC008877|CARD9|64170|caspase recruitment domain family, member 9##AK024001|CARD9|64170|caspase recruitment domain family, member 9##NM_052813|CARD9|64170|caspase recruitment domain family, member 9##NM_052814|CARD9|64170|caspase recruitment domain family, member 9##NM_003086|SNAPC4|6621|small nuclear RNA activating complex, polypeptide 4, 190kDa	0.996134	CTCF.p2:-8:0.996
chr9	6827477	6827606	reg1020225.p1	6.224	+	TSC_hg19_v1_chr9_+_6757984 AB018323 AK304095 AK314355 AB037901 BC008296 AK303651 AK304032 BC104859 BC104861 BC143571	-69502	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	-69874	+	AK310439 NM_001146696	-106679	+	AL137489 TSC_hg19_v1_chr9_-_7799779 BC009510 AK308643 AK128876 AK292632 NM_033428	972174	-	TSC_hg19_v1_chr9_+_8713275 AY779046	1885751	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	1906378	-	AB018323|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304095|KDM4C|23081|lysine (K)-specific demethylase 4C##AK314355|KDM4C|23081|lysine (K)-specific demethylase 4C##AB037901|KDM4C|23081|lysine (K)-specific demethylase 4C##BC008296|KDM4C|23081|lysine (K)-specific demethylase 4C##AK303651|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304032|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104859|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104861|KDM4C|23081|lysine (K)-specific demethylase 4C##BC143571|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##AL137489|C9orf123|90871|chromosome 9 open reading frame 123##BC009510|C9orf123|90871|chromosome 9 open reading frame 123##AK292632|C9orf123|90871|chromosome 9 open reading frame 123##NM_033428|C9orf123|90871|chromosome 9 open reading frame 123##AY779046|RPL18A|6142|ribosomal protein L18a##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	0.97024	CTCF.p2:1:0.970
chr1	44412149	44412266	reg1021205.p1	6.223	+	AF120274 NM_001136215 NM_057090 NM_057091	-13216	+	AK301829 AY051143 NM_006279 NM_174963 NM_174964 NM_174965 NM_174966 NM_174967 NM_174968 NM_174969 NM_174970 NM_174971 TSC_hg19_v1_chr1_+_44173217 BC050380	-238989	+	TSC_hg19_v1_chr1_-_44173037 BC094867	-239184	-	TSC_hg19_v1_chr1_+_44412483 NM_014652	254	+	TSC_hg19_v1_chr1_+_44412625 AB018267	403	+	TSC_hg19_v1_chr1_+_44412640 BC008194	455	+	AF120274|ARTN|9048|artemin##NM_001136215|ARTN|9048|artemin##NM_057090|ARTN|9048|artemin##NM_057091|ARTN|9048|artemin##AK301829|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##AY051143|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_006279|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174963|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174964|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174965|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174966|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174967|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174968|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174969|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174970|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174971|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC050380|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC094867|LOC100132774|100132774|uncharacterized LOC100132774##NM_014652|IPO13|9670|importin 13##AB018267|IPO13|9670|importin 13##BC008194|IPO13|9670|importin 13	0.0	
chr4	120548475	120548585	reg1021969.p2	6.223	+	AM392687 AM392735 AM392945 AM393171 AM393311 AM393426 AM393432 AM393814 AY264918 AB015656 NM_033430 AF155193 TSC_hg19_v1_chr4_-_120548474	-125	-	TSC_hg19_v1_chr4_-_120375778 BC070391	-172752	-	CU686944 AK025079 BC069617 BC069466 BC069625 BC069637 BC111791 NM_000134	-305244	-	TSC_hg19_v1_chr4_-_120549121 AF155194 NM_033437	646	-	AB527373 AM393036 AM393270 AM393448 AK290189 BC126233 AJ004865 AF155192 TSC_hg19_v1_chr4_-_120549960 AF043731 NM_001083	1373	-	D89094 TSC_hg19_v1_chr4_-_120550167	1632	-	AM392687|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM392735|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM392945|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393171|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393311|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393426|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393432|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393814|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AY264918|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AB015656|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033430|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155193|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AK025079|FABP2|2169|fatty acid binding protein 2, intestinal##BC069617|FABP2|2169|fatty acid binding protein 2, intestinal##BC069466|FABP2|2169|fatty acid binding protein 2, intestinal##BC069625|FABP2|2169|fatty acid binding protein 2, intestinal##BC069637|FABP2|2169|fatty acid binding protein 2, intestinal##BC111791|FABP2|2169|fatty acid binding protein 2, intestinal##NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal##AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	0.978808	CTCF.p2:-16:0.979
chr22	40988934	40989115	reg1021828.p2	6.222	+	TSC_hg19_v1_chr22_-_40859427 AJ297257	-129594	-	TSC_hg19_v1_chr22_+_40766652 AK301042	-222369	+	TSC_hg19_v1_chr22_+_40766636 AY308849 BC008078	-222383	+	TSC_hg19_v1_chr22_-_41032681 AF368061	43629	-	TSC_hg19_v1_chr22_-_41032716 BC115039 NM_020831 AF448806 AB037859 BC064620 AJ297258	43680	-	AK314857 AF490537 NM_005297 BC001736 BC021146 AY745811 AY747629 CR456497 AB063174 CU013094 CU013382 AB463112 AY562945 BT006725 DQ893603 DQ895065	86197	+	AJ297257|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AK301042|SGSM3|27352|small G protein signaling modulator 3##AY308849|SGSM3|27352|small G protein signaling modulator 3##BC008078|SGSM3|27352|small G protein signaling modulator 3##AF368061|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC115039|MKL1|57591|megakaryoblastic leukemia (translocation) 1##NM_020831|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF448806|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AB037859|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC064620|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AJ297258|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AK314857|MCHR1|2847|melanin-concentrating hormone receptor 1##AF490537|MCHR1|2847|melanin-concentrating hormone receptor 1##NM_005297|MCHR1|2847|melanin-concentrating hormone receptor 1##BC001736|MCHR1|2847|melanin-concentrating hormone receptor 1##BC021146|MCHR1|2847|melanin-concentrating hormone receptor 1##AY745811|MCHR1|2847|melanin-concentrating hormone receptor 1##AY747629|MCHR1|2847|melanin-concentrating hormone receptor 1##CR456497|MCHR1|2847|melanin-concentrating hormone receptor 1##AB063174|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013094|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013382|MCHR1|2847|melanin-concentrating hormone receptor 1##AY562945|MCHR1|2847|melanin-concentrating hormone receptor 1##BT006725|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ893603|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ895065|MCHR1|2847|melanin-concentrating hormone receptor 1	0.0	
chr3	101292537	101292640	reg1020574.p1	6.222	+	TSC_hg19_v1_chr3_+_101280711 BC035967 AF226052 NM_017819 AK000439 AF086243 AF155111	-11871	+	AM392620 AM393440 TSC_hg19_v1_chr3_-_101232029 AK297356 BC129988 BC062674 BX537943 AL833577 AF199458 NM_001077203 NM_020654	-60560	-	AF173155 AB593127 NM_016247 DQ980603 DQ980602	-253166	-	AK098760 TSC_hg19_v1_chr3_+_101293023	417	+	TSC_hg19_v1_chr3_+_101293044 BC013916 CR627371 BC022001 AB037675 NM_020357 AK025551 AK222978 BC107796 AK314629 AB590038 DQ890799 DQ893953	467	+	TSC_hg19_v1_chr3_+_101395273 BC003066 AK022880	102695	+	BC035967|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF226052|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##NM_017819|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AK000439|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF086243|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF155111|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7##AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7##AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7##BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7##AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7##AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7##AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AB593127|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AK098760|PCNP|57092|PEST proteolytic signal containing nuclear protein##BC013916|PCNP|57092|PEST proteolytic signal containing nuclear protein##CR627371|PCNP|57092|PEST proteolytic signal containing nuclear protein##BC022001|PCNP|57092|PEST proteolytic signal containing nuclear protein##AB037675|PCNP|57092|PEST proteolytic signal containing nuclear protein##NM_020357|PCNP|57092|PEST proteolytic signal containing nuclear protein##AK025551|PCNP|57092|PEST proteolytic signal containing nuclear protein##AK222978|PCNP|57092|PEST proteolytic signal containing nuclear protein##BC107796|PCNP|57092|PEST proteolytic signal containing nuclear protein##AK314629|PCNP|57092|PEST proteolytic signal containing nuclear protein##DQ890799|PCNP|57092|PEST proteolytic signal containing nuclear protein##DQ893953|PCNP|57092|PEST proteolytic signal containing nuclear protein##BC003066|LOC100009676|100009676|uncharacterized LOC100009676##AK022880|LOC100009676|100009676|uncharacterized LOC100009676	0.020361	
chr5	34188495	34188623	reg1023144.p1	6.222	+	EU399231 EU399232 BC112925 AF329837 BC120990 AF326976 AY358388 AK075533 BX640995 AK315921 AK295968 NM_030945 NM_181435	-145257	-	TSC_hg19_v1_chr5_-_34008240 AK225749	-180315	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	-180396	-	TSC_hg19_v1_chr5_+_34656432 NM_001145522 NM_015577	467854	+	TSC_hg19_v1_chr5_+_34656506 BC052988 AF155135 AK314379	467953	+	AB037755 NM_001145520 TSC_hg19_v1_chr5_+_34656599	468038	+	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK225749|AMACR|23600|alpha-methylacyl-CoA racemase##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001145522|RAI14|26064|retinoic acid induced 14##NM_015577|RAI14|26064|retinoic acid induced 14##BC052988|RAI14|26064|retinoic acid induced 14##AF155135|RAI14|26064|retinoic acid induced 14##AK314379|RAI14|26064|retinoic acid induced 14##AB037755|RAI14|26064|retinoic acid induced 14##NM_001145520|RAI14|26064|retinoic acid induced 14	0.720518	CTCF.p2:-11:0.721
chr5	75698933	75699113	reg1021502.p2	6.222	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-319752	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-685763	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	-690761	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	93	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	220122	-	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	312933	+	AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor	0.0	
chr1	64383698	64383807	reg1024206.p2	6.221	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	-144093	+	NM_001172818 AK300100	-294859	+	AK293298 NM_001172819 AK298505	-324238	+	BC029895 NM_152489	285737	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	552766	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	827047	+	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_020925|CACHD1|57685|cache domain containing 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2	0.998814	CTCF.p2:-8:0.999
chr3	72900565	72900699	reg1021083.p1	6.221	+	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	-3040	-	BC017274 TSC_hg19_v1_chr3_-_72897575	-3057	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	-3084	-	TSC_hg19_v1_chr3_+_72937356 NM_001080393	36644	+	TSC_hg19_v1_chr3_+_73045961 AK289901 BC100281	145325	+	TSC_hg19_v1_chr3_+_73045984 BC110889	145359	+	BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_001080393|GXYLT2|727936|glucoside xylosyltransferase 2##AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	0.719827	CTCF.p2:6:0.720
chr10	52381807	52381979	reg1023355.p1	6.220	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-373553	-	NM_018232	-544008	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-554171	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	1810	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	117817	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	263500	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.873934	CTCF.p2:21:0.874
chr3	49603832	49603940	reg1023053.p1	6.220	+	TSC_hg19_v1_chr3_+_49591913 AF052224 NM_003458	-11970	+	AK297802 TSC_hg19_v1_chr3_+_49568448	-35477	+	TSC_hg19_v1_chr3_+_49547870 DQ893491 DQ896435	-55969	+	BC000362 BC001499 BC001826 NM_001640	107548	+	TSC_hg19_v1_chr3_+_49711791 AK314962	107889	+	D38441 TSC_hg19_v1_chr3_+_49711819 AF141383 J03068 S90797	107998	+	AF052224|BSN|8927|bassoon (presynaptic cytomatrix protein)##NM_003458|BSN|8927|bassoon (presynaptic cytomatrix protein)##AK297802|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##DQ893491|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##DQ896435|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##BC000362|APEH|327|N-acylaminoacyl-peptide hydrolase##BC001499|APEH|327|N-acylaminoacyl-peptide hydrolase##BC001826|APEH|327|N-acylaminoacyl-peptide hydrolase##NM_001640|APEH|327|N-acylaminoacyl-peptide hydrolase##AK314962|APEH|327|N-acylaminoacyl-peptide hydrolase##D38441|APEH|327|N-acylaminoacyl-peptide hydrolase##AF141383|APEH|327|N-acylaminoacyl-peptide hydrolase	0.492397	CTCF.p2:-4:0.492
chr6	107453704	107453806	reg1023264.p2	6.220	+	BC131628 NM_001080450	-18120	-	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	-104283	+	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	-376258	+	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	326975	-	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	357673	+	AK303562 AK074125 TSC_hg19_v1_chr6_-_108145518 AK093571 AX748208 NM_198081	691761	-	BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203##NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)##AK303562|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK074125|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK093571|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_198081|SCML4|256380|sex comb on midleg-like 4 (Drosophila)	0.986584	CTCF.p2:8:0.987
chr9	2067005	2067140	reg1023883.p1	6.220	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-51776	+	AF130729 NM_181872	-1016463	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-1016702	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	554735	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	555002	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	555040	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.018194	
chr15	100889957	100890047	reg1012309.p1	6.219	+	AB527357 AJ315735 NM_139057	-7859	-	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-616368	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-616398	-	BC034500 BC034970 NM_178842	194895	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	252407	-	NM_024708 NM_198243 TSC_hg19_v1_chr15_+_101142810 AK289860 BC063581 AF451994 AK026204 AK222958 AK222974 BC025252	252793	+	AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)##NM_024708|ASB7|140460|ankyrin repeat and SOCS box containing 7##NM_198243|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK289860|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC063581|ASB7|140460|ankyrin repeat and SOCS box containing 7##AF451994|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK026204|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222958|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222974|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC025252|ASB7|140460|ankyrin repeat and SOCS box containing 7	0.997495	CTCF.p2:10:0.997
chr15	22472772	22472864	reg1021753.p1	6.218	+	BC136597 BC136598 NM_001005241 DQ786223	-90373	+	BC136985 NM_001004719	-104341	+	NM_207355 BC066981	-389680	-	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	404	-	AK097517 NM_001001413	263427	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	360652	+	BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5	0.994474	CTCF.p2:10:0.994
chr3	193383305	193383468	reg1027302.p1	6.218	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-72221	+	TSC_hg19_v1_chr3_+_193311006 BC043443 BC075805 AB011139	-72319	+	TSC_hg19_v1_chr3_+_193310928 NM_015560 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837	-72431	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	470547	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	470569	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	688688	-	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)##BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)##AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2	0.899667	CTCF.p2:-29:0.900
chr5	18772700	18772836	reg1023186.p1	6.218	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-1554928	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-1555156	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-1836383	-	AK295087 BC031051 NM_001167667 NM_004934	1215554	-	TSC_hg19_v1_chr5_+_21459621 AK290693	2686841	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	2686880	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.0	
chr5	78216552	78216664	reg1024849.p1	6.218	+	TSC_hg19_v1_chr5_-_77944584 NM_005779	-272042	-	CR936660 TSC_hg19_v1_chr5_-_77845052	-371585	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-410412	-	J05225 TSC_hg19_v1_chr5_-_78281101	64480	-	AK290865 TSC_hg19_v1_chr5_-_78281134	64525	-	TSC_hg19_v1_chr5_-_78281142 AK314903	64538	-	NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B##AK314903|ARSB|411|arylsulfatase B	0.0	
chr1	108293120	108293275	reg1023725.p2	6.216	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	-62073	-	AB023193 TSC_hg19_v1_chr1_+_107683657	-609593	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-610455	+	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	214403	-	AJ619961 NM_213651 AK292567	442199	-	AF123303 EU832524 EU832606 AJ619987 TSC_hg19_v1_chr1_-_108742797 AK316506	449573	-	AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.998484	CTCF.p2:-1:0.998
chr2	172562780	172562877	reg1021522.p1	6.216	+	TSC_hg19_v1_chr2_+_172544264 AK096579 AK075323 AF250307 BC109375 AF134477 AK316119 BC015038	-18537	+	TSC_hg19_v1_chr2_+_172543981 BX537412 AK055491 NM_001378 AK225759 BC091498 AY037160 AK308008 AK298561	-18804	+	TSC_hg19_v1_chr2_+_172379020 NM_001127383 NM_024843 AK128495 AK316588 AL136693 BC016900 AK291731 AK027115 AK225459 BC065290 HQ257890	-183873	+	AB527259 DQ891540 EU176607 TSC_hg19_v1_chr2_-_172750755 AK091071 BC016932 AJ496568 Y14494 AK022828 AK294638 NM_003705	187955	-	TSC_hg19_v1_chr2_+_172778944 NM_003642 AK313699 BC063003	216104	+	TSC_hg19_v1_chr2_+_172778970 AK309001	216138	+	AK096579|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK075323|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF250307|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC109375|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF134477|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK316119|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC015038|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BX537412|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK055491|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##NM_001378|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK225759|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC091498|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AY037160|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK308008|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK298561|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##NM_001127383|CYBRD1|79901|cytochrome b reductase 1##NM_024843|CYBRD1|79901|cytochrome b reductase 1##AK128495|CYBRD1|79901|cytochrome b reductase 1##AK316588|CYBRD1|79901|cytochrome b reductase 1##AL136693|CYBRD1|79901|cytochrome b reductase 1##BC016900|CYBRD1|79901|cytochrome b reductase 1##AK291731|CYBRD1|79901|cytochrome b reductase 1##AK027115|CYBRD1|79901|cytochrome b reductase 1##AK225459|CYBRD1|79901|cytochrome b reductase 1##BC065290|CYBRD1|79901|cytochrome b reductase 1##HQ257890|CYBRD1|79901|cytochrome b reductase 1##DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##NM_003642|HAT1|8520|histone acetyltransferase 1##AK313699|HAT1|8520|histone acetyltransferase 1##BC063003|HAT1|8520|histone acetyltransferase 1##AK309001|HAT1|8520|histone acetyltransferase 1	0.997546	CTCF.p2:1:0.998
chr3	18430713	18430831	reg1021806.p1	6.216	+	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-646605	-	D86965 NM_014744	-648374	-	AK310539 NM_001134381	-689261	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	36025	-	BC001744 NM_001131010	49461	-	AK295633 AY053503 NM_144633 AB209053 AK309034	759232	+	NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	0.999707	CTCF.p2:33:1.000
chr20	719763	719875	reg1021777.p1	6.215	+	AY129025 NM_033129	-62997	-	AK125343 TSC_hg19_v1_chr20_-_656445	-63374	-	TSC_hg19_v1_chr20_-_633845 AK127435 AL833944 NM_080725	-85953	-	AK074650 BC009750 AK291706 NM_033409	29358	-	AK314165 NM_001042353 TSC_hg19_v1_chr20_+_814388	94565	+	BC004222 NM_207121	96891	+	AY129025|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)##NM_033129|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)##AK127435|SRXN1|140809|sulfiredoxin 1##AL833944|SRXN1|140809|sulfiredoxin 1##NM_080725|SRXN1|140809|sulfiredoxin 1##AK074650|C20orf54|113278|chromosome 20 open reading frame 54##BC009750|C20orf54|113278|chromosome 20 open reading frame 54##AK291706|C20orf54|113278|chromosome 20 open reading frame 54##NM_033409|C20orf54|113278|chromosome 20 open reading frame 54##AK314165|FAM110A|83541|family with sequence similarity 110, member A##NM_001042353|FAM110A|83541|family with sequence similarity 110, member A##BC004222|FAM110A|83541|family with sequence similarity 110, member A##NM_207121|FAM110A|83541|family with sequence similarity 110, member A	0.980236	CTCF.p2:26:0.980
chr4	78880858	78880986	reg1022211.p1	6.215	+	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	-97008	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	-140378	-	AF044197 NM_006419	-448017	+	NM_001166133 NM_025074 TSC_hg19_v1_chr4_+_78978757 AK096838	97818	+	BC006366 TSC_hg19_v1_chr4_-_79103287	222363	-	NM_005139 TSC_hg19_v1_chr4_+_79472790	591848	+	NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_001166133|FRAS1|80144|Fraser syndrome 1##NM_025074|FRAS1|80144|Fraser syndrome 1##AK096838|FRAS1|80144|Fraser syndrome 1##NM_005139|ANXA3|306|annexin A3	0.981775	CTCF.p2:-16:0.982
chr5	89561014	89561194	reg1000862.p1	6.215	+	AL833268 AL833274 NM_001131005 NM_001193347	-1361210	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1375840	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-1375984	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	144435	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	209078	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	209474	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr1	147599172	147599318	reg1025629.p1	6.214	+	NM_001097616	-173679	+	TSC_hg19_v1_chr1_+_147400563 BC146880 AK316371 BC003187 AB528816 DQ890650 DQ893830 BT006679	-198644	+	TSC_hg19_v1_chr1_+_147400532 AK021758 NM_016334 AL133020 AY358966 AB097024 AB097025 AK223223 AK299995 AK302266 BC067816 AF132947 U78723	-198723	+	AF419617 NM_001101663	10835	-	BX648497 TSC_hg19_v1_chr1_-_147624379	25100	-	TSC_hg19_v1_chr1_-_147624593 BC136292 NM_183372	25271	-	NM_001097616|GPR89C|728932|G protein-coupled receptor 89C##BC146880|GPR89A|653519|G protein-coupled receptor 89A##AK316371|GPR89A|653519|G protein-coupled receptor 89A##BC003187|GPR89A|653519|G protein-coupled receptor 89A##DQ890650|GPR89B|51463|G protein-coupled receptor 89B##DQ893830|GPR89A|653519|G protein-coupled receptor 89A##BT006679|GPR89A|653519|G protein-coupled receptor 89A##AK021758|GPR89A|653519|G protein-coupled receptor 89A##NM_016334|GPR89B|51463|G protein-coupled receptor 89B##AL133020|GPR89B|51463|G protein-coupled receptor 89B##AY358966|GPR89A|653519|G protein-coupled receptor 89A##AB097024|GPR89A|653519|G protein-coupled receptor 89A##AB097025|GPR89A|653519|G protein-coupled receptor 89A##AK223223|GPR89A|653519|G protein-coupled receptor 89A##AK299995|GPR89A|653519|G protein-coupled receptor 89A##AK302266|GPR89B|51463|G protein-coupled receptor 89B##BC067816|GPR89A|653519|G protein-coupled receptor 89A##AF132947|GPR89A|653519|G protein-coupled receptor 89A##U78723|GPR89B|51463|G protein-coupled receptor 89B##AF419617|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_001101663|NBPF24|728912|neuroblastoma breakpoint family, member 24##BX648497|NBPF11|200030|neuroblastoma breakpoint family, member 11##BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11	0.389166	CTCF.p2:-37:0.389
chr12	57157024	57157125	reg1022760.p1	6.214	+	AB528338 CU675073 EU176421 EU176762 TSC_hg19_v1_chr12_-_57146108 AK223391 AK314866 X74330 BC005266 NM_000946	-10948	-	TSC_hg19_v1_chr12_-_57119316 NM_001113202 NM_001113203	-37756	-	BC105120 BC105122 TSC_hg19_v1_chr12_-_57119084 BC106041 AF054187 AY605660 AY911673 X80909 AK311904 AK096699 AK223085 AK293209	-38032	-	AK313423 BC020710 NM_003725 TSC_hg19_v1_chr12_+_57157107 U89281 AF223225	37	+	AY044434 BC101551 BC101553 AK122782 NM_148897	171042	-	AF057034 NM_003708	194325	-	EU176421|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##EU176762|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##AK223391|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##AK314866|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##X74330|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##BC005266|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##NM_000946|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit##NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC105120|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC105122|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC106041|NACA|4666|nascent polypeptide-associated complex alpha subunit##AF054187|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY605660|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY911673|NACA|4666|nascent polypeptide-associated complex alpha subunit##X80909|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK311904|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK096699|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK223085|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK293209|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK313423|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##BC020710|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##NM_003725|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##U89281|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##AF223225|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##AY044434|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC101551|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC101553|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##AK122782|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##NM_148897|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##AF057034|RDH16|8608|retinol dehydrogenase 16 (all-trans)##NM_003708|RDH16|8608|retinol dehydrogenase 16 (all-trans)	0.976701	CTCF.p2:-7:0.977
chr14	21335234	21335337	reg1023151.p1	6.214	+	TSC_hg19_v1_chr14_-_21271004 AK312100 BC022882 BC005324 NM_002933 NM_198234 NM_198235	-64267	-	AK098375 NM_198232	-64738	-	BC020848 NM_005615 AK313580	-86067	+	TSC_hg19_v1_chr14_+_21359543 NM_002935 X15161 M28128 BC096060 BC096061 BC096062	24274	+	TSC_hg19_v1_chr14_+_21423628 NM_002934 X55988 BC093678 BC093680 M28129 M24157 BC096059 M30510	88363	+	NM_001029991 NM_022734	122679	+	AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##AK098375|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198232|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC020848|RNASE6|6039|ribonuclease, RNase A family, k6##NM_005615|RNASE6|6039|ribonuclease, RNase A family, k6##AK313580|RNASE6|6039|ribonuclease, RNase A family, k6##NM_002935|RNASE3|6037|ribonuclease, RNase A family, 3##X15161|RNASE3|6037|ribonuclease, RNase A family, 3##M28128|RNASE3|6037|ribonuclease, RNase A family, 3##BC096060|RNASE3|6037|ribonuclease, RNase A family, 3##BC096061|RNASE3|6037|ribonuclease, RNase A family, 3##BC096062|RNASE3|6037|ribonuclease, RNase A family, 3##NM_002934|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##X55988|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093678|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093680|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M28129|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M24157|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC096059|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M30510|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##NM_001029991|METTL17|64745|methyltransferase like 17##NM_022734|METTL17|64745|methyltransferase like 17	0.898921	CTCF.p2:15:0.899
chr2	20850878	20850987	reg1023118.p1	6.214	+	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	-84	-	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-204100	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-300513	-	AF522369 NM_182828	15491	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	171921	-	M36676 TSC_hg19_v1_chr2_-_21225654 M31030	374761	-	BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43##M36676|APOB|338|apolipoprotein B (including Ag(x) antigen)##M31030|APOB|338|apolipoprotein B (including Ag(x) antigen)	0.998575	CTCF.p2:-7:0.999
chr22	23933431	23933545	reg1021783.p2	6.214	+	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	-11053	-	TSC_hg19_v1_chr22_-_23744738 AK056130 AK092581 AX747609 AK092530 AX747585	-188745	-	TSC_hg19_v1_chr22_+_23540316 X14677 X14675	-393083	+	BC056888 AL080197 BC063390 AK310349 NM_016449	41008	-	AY101396 NM_153615	99559	+	TSC_hg19_v1_chr22_-_24059494 BC033757	125977	-	DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##AK056130|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092581|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092530|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43##AY101396|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4##NM_153615|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4	0.995349	CTCF.p2:-6:0.995
chr4	65873664	65873810	reg1022500.p1	6.214	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	-598641	-	NM_015236	-3510899	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-3806762	+	AK307826 NM_004439 NM_182472	661915	-	TSC_hg19_v1_chr4_-_66536182 AB209375	662460	-	CU688992 TSC_hg19_v1_chr4_-_68411171	2537386	-	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.98188	CTCF.p2:26:0.982
chr5	17216680	17216819	reg1000999.p2	6.214	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-280364	-	BC050682 BC041694 TSC_hg19_v1_chr5_-_16936357 BC108736 BC032669	-280421	-	AK316138 TSC_hg19_v1_chr5_-_16742338	-474412	-	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	863	+	TSC_hg19_v1_chr5_+_17217804 AF039656	1091	+	AK295087 BC031051 NM_001167667 NM_004934	2771573	-	AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##BC050682|MYO10|4651|myosin X##BC041694|MYO10|4651|myosin X##BC108736|MYO10|4651|myosin X##BC032669|MYO10|4651|myosin X##AK316138|MYO10|4651|myosin X##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2	0.015521	
chr9	140156776	140156876	reg1023498.p1	6.214	+	TSC_hg19_v1_chr9_+_140149888 AF464935 AB384577 AM393289	-6903	+	TSC_hg19_v1_chr9_+_140149768 BC019029	-7027	+	TSC_hg19_v1_chr9_+_140149758 AK091056 AX746754 NM_015456	-7067	+	TSC_hg19_v1_chr9_+_140172277 AK000252 NM_017723	15459	+	BC053618 NM_001004354 TSC_hg19_v1_chr9_-_140196724	39894	-	BC065002 TSC_hg19_v1_chr9_-_140317615 BC110879 AK000440 AK094438 BC039252 BC037355	160784	-	AF464935|COBRA1|25920|cofactor of BRCA1##AM393289|COBRA1|25920|cofactor of BRCA1##BC019029|COBRA1|25920|cofactor of BRCA1##AK091056|COBRA1|25920|cofactor of BRCA1##NM_015456|COBRA1|25920|cofactor of BRCA1##AK000252|C9orf167|54863|chromosome 9 open reading frame 167##NM_017723|C9orf167|54863|chromosome 9 open reading frame 167##BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein##NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein##BC065002|EXD3|54932|exonuclease 3'-5' domain containing 3##BC110879|EXD3|54932|exonuclease 3'-5' domain containing 3##AK000440|EXD3|54932|exonuclease 3'-5' domain containing 3##AK094438|EXD3|54932|exonuclease 3'-5' domain containing 3##BC039252|EXD3|54932|exonuclease 3'-5' domain containing 3##BC037355|EXD3|54932|exonuclease 3'-5' domain containing 3	0.830069	CTCF.p2:14:0.830
chr10	75646145	75646325	reg1000353.p2	6.213	+	AB590440 L07044 DQ892365 DQ895574 DQ896692 TSC_hg19_v1_chr10_-_75634275 U66064 AK131199 AK095576 BC034044 AK225771 AK291704 AK301180 NM_001204492 NM_001222 NM_172169 NM_172170 NM_172171 NM_172173	-11916	-	TSC_hg19_v1_chr10_-_75571579 BC018681 AK303648 NM_003635	-74670	-	BC035711 TSC_hg19_v1_chr10_-_75571357 BC052780	-74861	-	NM_001145031 NM_002658 TSC_hg19_v1_chr10_+_75670889 AK297940 AK298560 AK312960	24642	+	BC013575 K03226 M15476 D00244 TSC_hg19_v1_chr10_+_75670948 X02760	24706	+	AB208961 TSC_hg19_v1_chr10_+_75673428	27152	+	L07044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ892365|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ895574|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ896692|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##U66064|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK131199|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK095576|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##BC034044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK225771|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK291704|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK301180|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001204492|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001222|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172169|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172170|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172171|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172173|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##BC018681|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##AK303648|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##NM_003635|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##BC035711|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##NM_001145031|PLAU|5328|plasminogen activator, urokinase##NM_002658|PLAU|5328|plasminogen activator, urokinase##AK297940|PLAU|5328|plasminogen activator, urokinase##AK298560|PLAU|5328|plasminogen activator, urokinase##AK312960|PLAU|5328|plasminogen activator, urokinase##BC013575|PLAU|5328|plasminogen activator, urokinase##K03226|PLAU|5328|plasminogen activator, urokinase##M15476|PLAU|5328|plasminogen activator, urokinase##D00244|PLAU|5328|plasminogen activator, urokinase##X02760|PLAU|5328|plasminogen activator, urokinase##AB208961|PLAU|5328|plasminogen activator, urokinase	0.0	
chr1	208171277	208171382	reg1023701.p1	6.213	+	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-86772	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-86946	-	BX640941 TSC_hg19_v1_chr1_-_208059392	-112006	-	TSC_hg19_v1_chr1_-_208417635 NM_025179	246320	-	AK091113 AX746785 NM_001104548	1430836	+	NM_020439 AK095713 AK289675 AF428261 BC032787	1585731	+	BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_025179|PLXNA2|5362|plexin A2##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	0.963227	CTCF.p2:-7:0.963
chr15	100273947	100274127	reg1024381.p3	6.213	+	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-403	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-433	-	TSC_hg19_v1_chr15_-_100273591 BC084545 AK124852	-471	-	AB527357 AJ315735 NM_139057	608106	-	BC034500 BC034970 NM_178842	810860	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	868372	-	BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC084545|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK124852|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)	0.0	
chr19	43271510	43271664	reg1027341.p1	6.213	+	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	-1763	-	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	-26986	-	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	-172557	-	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	112238	-	CU676604 DQ893114 DQ896388 M31125 M33666 NM_002782 X17098 BC020652 NM_001031850	150406	-	BC136401 U18467 BC030979 AK309898 NM_001206650 NM_002783	169702	-	BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##DQ893114|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##DQ896388|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M31125|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M33666|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_002782|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##X17098|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC020652|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_001031850|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC136401|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##U18467|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##BC030979|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_001206650|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_002783|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)	0.8433	CTCF.p2:9:0.843
chr9	114791020	114791200	reg1019775.p2	6.213	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-131643	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-131996	+	AL833535 NM_173521	-245335	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	146410	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	304177	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	304739	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chrX	19035545	19035645	reg1021436.p1	6.213	+	TSC_hg19_v1_chrX_-_19002476 NM_000292	-33133	-	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	-326551	+	AB464151 AF014459 DQ426892 NM_000330	-345391	-	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	105072	-	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	326487	+	NM_001001671	497783	-	NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001001671|MAP3K15|389840|mitogen-activated protein kinase kinase kinase 15	0.975636	CTCF.p2:0:0.951
chrX	27354763	27354883	reg1022623.p1	6.213	+	AK097561 BC067286 NM_173523	-1144267	+	NM_173699 BC029525 AK057361	-1198337	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-2320750	-	BC157859 NM_001136533	410102	+	AK057527 NM_182506 BC101307 BC101309 BC101310	471292	+	AK128123 NM_001017930	644742	-	AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##NM_139058|ARX|170302|aristaless related homeobox##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	0.999662	CTCF.p2:-10:1.000
chr11	73189904	73190060	reg1023031.p2	6.211	+	TSC_hg19_v1_chr11_+_73087683 AF319553 NM_032871	-102291	+	TSC_hg19_v1_chr11_+_73087471 AK027899 NM_152222 BC051810 BC017279	-102545	+	TSC_hg19_v1_chr11_-_73020422 AK300095	-169559	-	D87470 TSC_hg19_v1_chr11_-_73309158 AK292054 EF197985 BC052341 EF363480 NM_015159	119216	-	AF101054 NM_001130033 NM_021200 U89715	167240	+	NM_001130034 NM_001130035 BC008075 AB209716 AK289620 TSC_hg19_v1_chr11_+_73358695 AK296033 AK301299 AF093249 AF100612 AK289909 AK311158	168681	+	AF319553|RELT|84957|RELT tumor necrosis factor receptor##NM_032871|RELT|84957|RELT tumor necrosis factor receptor##AK027899|RELT|84957|RELT tumor necrosis factor receptor##NM_152222|RELT|84957|RELT tumor necrosis factor receptor##BC051810|RELT|84957|RELT tumor necrosis factor receptor##BC017279|RELT|84957|RELT tumor necrosis factor receptor##AK300095|LOC100287837|100287837|uncharacterized LOC100287837##D87470|FAM168A|23201|family with sequence similarity 168, member A##AK292054|FAM168A|23201|family with sequence similarity 168, member A##EF197985|FAM168A|23201|family with sequence similarity 168, member A##BC052341|FAM168A|23201|family with sequence similarity 168, member A##EF363480|FAM168A|23201|family with sequence similarity 168, member A##NM_015159|FAM168A|23201|family with sequence similarity 168, member A##AF101054|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_021200|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##U89715|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130034|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130035|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##BC008075|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AB209716|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289620|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK296033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK301299|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF093249|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF100612|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289909|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK311158|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1	0.998291	CTCF.p2:-3:0.998
chr16	14694098	14694238	reg1025621.p1	6.211	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-399970	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-413650	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-529082	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	29860	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	29965	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	32571	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.817196	CTCF.p2:-14:0.817
chr2	48828647	48828762	reg1020528.p2	6.211	+	NM_001198594 BC101772 BC101774 BC143520 AF255310 BC121063 BC121064 AY026319	-20956	+	AF026169 NM_172311	-32546	+	TSC_hg19_v1_chr2_+_48757357 AK314464 NM_001198595 NM_006873 CR936807	-71379	+	AK302220 NM_001193487 NM_006872 BC025991 AK223350 AF106857 CU693090 DQ891566 DQ894756 BC064585	16271	+	S57793 M63108 M73746 AK123498 NM_000233	154140	-	AY429104 BC096831 X68044 JN003607 BC118548 BC125270 M65085 S59900 M95489 AK292562 AK310367 NM_000145 NM_181446	552906	-	NM_001198594|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##BC101772|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##BC101774|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##BC143520|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##AF255310|STON1|11037|stonin 1##BC121063|STON1|11037|stonin 1##BC121064|STON1|11037|stonin 1##AY026319|STON1|11037|stonin 1##AF026169|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##NM_172311|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##AK314464|STON1|11037|stonin 1##NM_001198595|STON1|11037|stonin 1##NM_006873|STON1|11037|stonin 1##CR936807|STON1|11037|stonin 1##AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like##BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like##AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like##AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like##BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like##S57793|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M63108|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M73746|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK123498|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##NM_000233|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AY429104|FSHR|2492|follicle stimulating hormone receptor##BC096831|FSHR|2492|follicle stimulating hormone receptor##X68044|FSHR|2492|follicle stimulating hormone receptor##JN003607|FSHR|2492|follicle stimulating hormone receptor##BC118548|FSHR|2492|follicle stimulating hormone receptor##BC125270|FSHR|2492|follicle stimulating hormone receptor##M65085|FSHR|2492|follicle stimulating hormone receptor##S59900|FSHR|2492|follicle stimulating hormone receptor##M95489|FSHR|2492|follicle stimulating hormone receptor##AK292562|FSHR|2492|follicle stimulating hormone receptor##AK310367|FSHR|2492|follicle stimulating hormone receptor##NM_000145|FSHR|2492|follicle stimulating hormone receptor##NM_181446|FSHR|2492|follicle stimulating hormone receptor	0.983306	CTCF.p2:-4:0.983
chr15	30891331	30891470	reg1022312.p1	6.210	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-205688	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-776777	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-777058	-	TSC_hg19_v1_chr15_+_30918372 BC071990	26986	+	BC105788 NM_001039841	27478	+	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	304674	+	BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1	0.369177	CTCF.p2:-25:0.369
chr2	123495416	123495539	reg1020807.p2	6.210	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-982240	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-1001012	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-1087832	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	1287387	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	3918230	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	3918315	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.0	
chrX	147966853	147967012	reg1021535.p1	6.210	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-166320	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-384744	+	BC034320 NM_152578 AY211917 AK098602	-904077	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	619842	-	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	655498	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	655662	+	AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A	0.821519	CTCF.p2:-4:0.822
chr10	105883280	105883424	reg1026767.p1	6.209	+	NM_145247 BC140835 NM_001002759 BC043256 AK291184	-1443	+	BC004478 D63465 TSC_hg19_v1_chr10_-_105845639 NM_000494	-37723	-	AK300117 TSC_hg19_v1_chr10_-_105845560 M91669 AK300226 AK309940	-37783	-	AL136901 TSC_hg19_v1_chr10_-_105992103 AK026597 AK295018 BC071565 BC036647 NM_025145	108742	-	NM_001191003	130599	+	NM_001191002 NM_004832 BX537431 TSC_hg19_v1_chr10_+_106014658 AK313680 BC000127 AF212303 U90313 AB590772	131229	+	NM_145247|SFR1|119392|SWI5-dependent recombination repair 1##BC140835|SFR1|119392|SWI5-dependent recombination repair 1##NM_001002759|SFR1|119392|SWI5-dependent recombination repair 1##BC043256|SFR1|119392|SWI5-dependent recombination repair 1##AK291184|SFR1|119392|SWI5-dependent recombination repair 1##BC004478|COL17A1|1308|collagen, type XVII, alpha 1##D63465|COL17A1|1308|collagen, type XVII, alpha 1##NM_000494|COL17A1|1308|collagen, type XVII, alpha 1##M91669|COL17A1|1308|collagen, type XVII, alpha 1##AK309940|COL17A1|1308|collagen, type XVII, alpha 1##AL136901|WDR96|80217|WD repeat domain 96##AK026597|WDR96|80217|WD repeat domain 96##AK295018|WDR96|80217|WD repeat domain 96##BC071565|WDR96|80217|WD repeat domain 96##BC036647|WDR96|80217|WD repeat domain 96##NM_025145|WDR96|80217|WD repeat domain 96##NM_001191003|GSTO1|9446|glutathione S-transferase omega 1##NM_001191002|GSTO1|9446|glutathione S-transferase omega 1##NM_004832|GSTO1|9446|glutathione S-transferase omega 1##BX537431|GSTO1|9446|glutathione S-transferase omega 1##AK313680|GSTO1|9446|glutathione S-transferase omega 1##BC000127|GSTO1|9446|glutathione S-transferase omega 1##AF212303|GSTO1|9446|glutathione S-transferase omega 1##U90313|GSTO1|9446|glutathione S-transferase omega 1	0.145199	
chr11	128193414	128193535	reg1022644.p2	6.209	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1320169	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1322749	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1322814	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	198489	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	198660	-	BX640634 NM_001143820	263978	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.063471	
chr12	124978490	124978670	reg1022135.p2	6.209	+	AK126577 NM_181709	-204871	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-520851	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-521381	-	TSC_hg19_v1_chr12_-_125002875 BC033087	24279	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	73495	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	369725	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr16	68150267	68150379	reg1023477.p1	6.209	+	TSC_hg19_v1_chr16_+_68119350 L41067	-30954	+	TSC_hg19_v1_chr16_+_68119335 AB209824	-30985	+	TSC_hg19_v1_chr16_+_68119279 NM_004555 NM_173163 NM_173165	-31069	+	CU688826 BC030146 BC052309 TSC_hg19_v1_chr16_-_68270026 AK025571 NM_024939	119718	-	AK300596 AK074828 NM_012320 TSC_hg19_v1_chr16_+_68279275 AK296263 AK298494 AL110209 BC062605 AK001705 AK222790	128927	+	AB017494 TSC_hg19_v1_chr16_+_68279299 AY358425 EU832326	128988	+	L41067|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##AB209824|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_004555|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173163|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173165|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##BC030146|ESRP2|80004|epithelial splicing regulatory protein 2##BC052309|ESRP2|80004|epithelial splicing regulatory protein 2##AK025571|ESRP2|80004|epithelial splicing regulatory protein 2##NM_024939|ESRP2|80004|epithelial splicing regulatory protein 2##AK300596|PLA2G15|23659|phospholipase A2, group XV##AK074828|PLA2G15|23659|phospholipase A2, group XV##NM_012320|PLA2G15|23659|phospholipase A2, group XV##AK296263|PLA2G15|23659|phospholipase A2, group XV##AK298494|PLA2G15|23659|phospholipase A2, group XV##AL110209|PLA2G15|23659|phospholipase A2, group XV##BC062605|PLA2G15|23659|phospholipase A2, group XV##AK001705|PLA2G15|23659|phospholipase A2, group XV##AK222790|PLA2G15|23659|phospholipase A2, group XV##AB017494|PLA2G15|23659|phospholipase A2, group XV##AY358425|PLA2G15|23659|phospholipase A2, group XV##EU832326|PLA2G15|23659|phospholipase A2, group XV	0.05973	
chr3	116778034	116778170	reg1022636.p1	6.209	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-613729	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-613771	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-1435683	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	1975431	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	1975581	-	AK097667 NM_152538 AK292387	2086795	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.953405	CTCF.p2:-22:0.917
chr4	1912492	1912639	reg1027842.p1	6.209	+	AF071593 AF071594 NM_133334 AY694128 AB384560	-10199	+	AF083386 AF083387 AF083388 AF083389 AF083390 AF083391 NM_007331 NM_133330 NM_133331 NM_133335	-18057	+	TSC_hg19_v1_chr4_+_1873169 BC052254 BC020545 BC032731	-39367	+	AB029013 TSC_hg19_v1_chr4_+_1953907	41305	+	AB044549 CU678178 EU831413 EU831506 AF101434 AK094040 TSC_hg19_v1_chr4_-_2010700 AK222853 BC002764	98128	-	TSC_hg19_v1_chr4_-_2010702 AK001304	98160	-	AF071593|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF071594|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133334|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AY694128|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083386|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083387|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083388|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083389|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083390|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083391|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_007331|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133330|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133331|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133335|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AB029013|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AB044549|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##EU831413|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##EU831506|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AF101434|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AK094040|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AK222853|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##BC002764|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AK001304|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2	0.196646	
chr5	28766794	28766910	reg1022968.p1	6.209	+	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	-1294449	+	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	-1728181	-	NM_006727	-4121768	-	NM_004932 TSC_hg19_v1_chr5_+_31193792 AK291290	2426944	+	TSC_hg19_v1_chr5_+_31193875 BC000019 AK024238	2427025	+	TSC_hg19_v1_chr5_-_31532201 AK308093 AF189011 BC054003 BX647724 NM_001100412 NM_013235	2765370	-	BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK308093|DROSHA|29102|drosha, ribonuclease type III##AF189011|DROSHA|29102|drosha, ribonuclease type III##BC054003|DROSHA|29102|drosha, ribonuclease type III##BX647724|DROSHA|29102|drosha, ribonuclease type III##NM_001100412|DROSHA|29102|drosha, ribonuclease type III##NM_013235|DROSHA|29102|drosha, ribonuclease type III	0.999486	CTCF.p2:4:0.999
chr20	57056693	57056803	reg1021838.p1	6.208	+	AK124571 TSC_hg19_v1_chr20_+_57022525	-34256	+	TSC_hg19_v1_chr20_+_56964291 BC001712 AF086628 AF086629 AK298036 AK127252 AB529043 CU674842 BT009811	-92294	+	TSC_hg19_v1_chr20_+_56964286 NM_001195677 NM_004738 AK023241 AY358464	-92524	+	BC101758 BC101760 AK074647 NM_153360 AK293299	33150	-	TSC_hg19_v1_chr20_+_57226338 AK316547 NM_001001433 NM_001134772 NM_001134773 NM_001204868 NM_003763 AK304867 AB209296	169640	+	TSC_hg19_v1_chr20_+_57226873 BC019042 AF008935 AF008936 AF008937 BC073876 AF038897 AF428146 AK026970	170243	+	AK124571|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BC001712|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086628|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086629|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK298036|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK127252|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BT009811|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##NM_001195677|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##NM_004738|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK023241|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AY358464|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BC101758|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##BC101760|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK074647|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##NM_153360|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK293299|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK316547|STX16|8675|syntaxin 16##NM_001001433|STX16|8675|syntaxin 16##NM_001134772|STX16|8675|syntaxin 16##NM_001134773|STX16|8675|syntaxin 16##NM_001204868|STX16|8675|syntaxin 16##NM_003763|STX16|8675|syntaxin 16##AK304867|STX16|8675|syntaxin 16##AB209296|STX16-NPEPL1|100534593|STX16-NPEPL1 readthrough (non-protein coding)##BC019042|STX16|8675|syntaxin 16##AF008935|STX16|8675|syntaxin 16##AF008936|STX16|8675|syntaxin 16##AF008937|STX16|8675|syntaxin 16##BC073876|STX16|8675|syntaxin 16##AF038897|STX16|8675|syntaxin 16##AF428146|STX16|8675|syntaxin 16##AK026970|STX16|8675|syntaxin 16	0.658289	CTCF.p2:-20:0.658
chrX	150921996	150922102	reg1022353.p1	6.208	+	AK128186 NM_005140 BC126302 BC126304	-18767	+	BC022064 AF249872 NM_033085 AK057369 AB528542 AM393498 CU692478 DQ892418 DQ895632	-37501	+	NM_024082	-58320	+	NM_001011548	159311	+	NM_002362	162659	+	NM_001011549 AK300179	163353	+	AK128186|CNGA2|1260|cyclic nucleotide gated channel alpha 2##NM_005140|CNGA2|1260|cyclic nucleotide gated channel alpha 2##BC126302|CNGA2|1260|cyclic nucleotide gated channel alpha 2##BC126304|CNGA2|1260|cyclic nucleotide gated channel alpha 2##BC022064|FATE1|89885|fetal and adult testis expressed 1##AF249872|FATE1|89885|fetal and adult testis expressed 1##NM_033085|FATE1|89885|fetal and adult testis expressed 1##AM393498|FATE1|89885|fetal and adult testis expressed 1##DQ892418|FATE1|89885|fetal and adult testis expressed 1##DQ895632|FATE1|89885|fetal and adult testis expressed 1##NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)##NM_001011548|MAGEA4|4103|melanoma antigen family A, 4##NM_002362|MAGEA4|4103|melanoma antigen family A, 4##NM_001011549|MAGEA4|4103|melanoma antigen family A, 4##AK300179|MAGEA4|4103|melanoma antigen family A, 4	0.0	
chr3	45637894	45638072	reg1023133.p2	6.207	+	TSC_hg19_v1_chr3_+_45636176 BC117236 BC117238 NM_014240 AJ132408 HQ258355	-1712	+	TSC_hg19_v1_chr3_+_45635397 M80651	-2398	+	AK308146 BC025989 TSC_hg19_v1_chr3_+_45430067 D21851 NM_015340	-207919	+	CR749564 TSC_hg19_v1_chr3_+_45730767 NM_014016	92750	+	TSC_hg19_v1_chr3_+_45730846 AK291142	92874	+	TSC_hg19_v1_chr3_+_45730887 AB020658 AK301248	92906	+	BC117236|LIMD1|8994|LIM domains containing 1##BC117238|LIMD1|8994|LIM domains containing 1##NM_014240|LIMD1|8994|LIM domains containing 1##AJ132408|LIMD1|8994|LIM domains containing 1##HQ258355|LIMD1|8994|LIM domains containing 1##M80651|LIMD1|8994|LIM domains containing 1##AK308146|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##BC025989|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##D21851|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015340|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##CR749564|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##NM_014016|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK291142|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AB020658|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK301248|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	0.0	
chr5	89900415	89900546	reg1020428.p1	6.207	+	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	-45866	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-75114	-	NM_006467 AK295434 U93868	-129778	+	AK091866 TSC_hg19_v1_chr5_-_90610220	709765	-	TSC_hg19_v1_chr5_+_90676181 BC043415	775682	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	778652	-	AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3	0.760848	CTCF.p2:23:0.761
chr10	114231757	114231863	reg1023374.p1	6.206	+	TSC_hg19_v1_chr10_-_114207307 AK308026	-24505	-	TSC_hg19_v1_chr10_+_114206991 BC017052 AK303646	-24799	+	TSC_hg19_v1_chr10_+_114206756 AK095476 NM_145206 BC064614	-25046	+	TSC_hg19_v1_chr10_+_114710005 AK225809 NM_001146274 NM_001146283 NM_001146284 NM_001146285 NM_001146286 NM_001198525 NM_001198526 NM_001198527 NM_001198528 NM_001198529 NM_001198530 NM_001198531 NM_030756 FJ010174 Y11306 AK315243 FJ010168 FJ010169 FJ010172 FJ010166 FJ010167 FJ010170 BC032656 FJ010171 AK299295 AB440195 AB451266 CR536574 HM352838 HM352839 HM352840 HM352841 HM352842 HM352843 HM352844 HM352845 HM352846 HM352847 HM352848 HM352849 HM352850 HM352851 BX648364	478492	+	TSC_hg19_v1_chr10_+_114710785 FJ010164 FJ010165 FJ010173	479023	+	AK303948 NM_001177660	1078779	+	AK308026|ZDHHC6|64429|zinc finger, DHHC-type containing 6##BC017052|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##AK303646|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##NM_145206|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010164|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010165|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010173|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK303948|HABP2|3026|hyaluronan binding protein 2##NM_001177660|HABP2|3026|hyaluronan binding protein 2	0.977532	CTCF.p2:15:0.978
chr16	14797122	14797275	reg1021596.p1	6.206	+	BC106731 BC106732 BC111804 NM_003561 U95301	-8721	-	TSC_hg19_v1_chr16_+_14726837 BC003054 AK291114 AK297067	-70355	+	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	-70459	+	TSC_hg19_v1_chr16_+_14927651 NM_014287 BC065535	130445	+	TSC_hg19_v1_chr16_+_14927721 X57398	130562	+	AB528194 AF132984 NM_006985	234101	+	BC106731|PLA2G10|8399|phospholipase A2, group X##BC106732|PLA2G10|8399|phospholipase A2, group X##BC111804|PLA2G10|8399|phospholipase A2, group X##NM_003561|PLA2G10|8399|phospholipase A2, group X##U95301|PLA2G10|8399|phospholipase A2, group X##BC003054|BFAR|51283|bifunctional apoptosis regulator##AK291114|BFAR|51283|bifunctional apoptosis regulator##AK297067|BFAR|51283|bifunctional apoptosis regulator##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator##NM_014287|NOMO1|23420|NODAL modulator 1##BC065535|NOMO1|23420|NODAL modulator 1##X57398|NOMO1|23420|NODAL modulator 1##AF132984|NPIP|9284|nuclear pore complex interacting protein##NM_006985|NPIP|9284|nuclear pore complex interacting protein	0.069875	
chr2	86600123	86600266	reg1026227.p1	6.206	+	AK297287 NM_001164730	-34989	-	AY562239 CR457301 CU687956 AK297201 TSC_hg19_v1_chr2_-_86564750 BC064846 AK294300 AK297359 AK297373 AK299334 AK023172 NM_001164731 NM_001164732 NM_022912	-35461	-	NM_016622 NM_145644 TSC_hg19_v1_chr2_+_86426604 BC020651 AK074352 AK314555 AK314577 AF208849 AL832982 CU676602	-173610	+	NM_018433	68076	+	TSC_hg19_v1_chr2_+_86668482 BX647752 BX640698	68261	+	TSC_hg19_v1_chr2_+_86668501 BC038297 BX647271 BX649109 CR749581 AB018285 BX648841 NM_001146688	68341	+	AK297287|REEP1|65055|receptor accessory protein 1##NM_001164730|REEP1|65055|receptor accessory protein 1##AY562239|REEP1|65055|receptor accessory protein 1##CR457301|REEP1|65055|receptor accessory protein 1##AK297201|REEP1|65055|receptor accessory protein 1##BC064846|REEP1|65055|receptor accessory protein 1##AK294300|REEP1|65055|receptor accessory protein 1##AK297359|REEP1|65055|receptor accessory protein 1##AK297373|REEP1|65055|receptor accessory protein 1##AK299334|REEP1|65055|receptor accessory protein 1##AK023172|REEP1|65055|receptor accessory protein 1##NM_001164731|REEP1|65055|receptor accessory protein 1##NM_001164732|REEP1|65055|receptor accessory protein 1##NM_022912|REEP1|65055|receptor accessory protein 1##NM_016622|MRPL35|51318|mitochondrial ribosomal protein L35##NM_145644|MRPL35|51318|mitochondrial ribosomal protein L35##BC020651|MRPL35|51318|mitochondrial ribosomal protein L35##AK074352|MRPL35|51318|mitochondrial ribosomal protein L35##AK314555|MRPL35|51318|mitochondrial ribosomal protein L35##AK314577|MRPL35|51318|mitochondrial ribosomal protein L35##AF208849|MRPL35|51318|mitochondrial ribosomal protein L35##AL832982|MRPL35|51318|mitochondrial ribosomal protein L35##NM_018433|KDM3A|55818|lysine (K)-specific demethylase 3A##BX647752|KDM3A|55818|lysine (K)-specific demethylase 3A##BX640698|KDM3A|55818|lysine (K)-specific demethylase 3A##BC038297|KDM3A|55818|lysine (K)-specific demethylase 3A##BX647271|KDM3A|55818|lysine (K)-specific demethylase 3A##BX649109|KDM3A|55818|lysine (K)-specific demethylase 3A##CR749581|KDM3A|55818|lysine (K)-specific demethylase 3A##AB018285|KDM3A|55818|lysine (K)-specific demethylase 3A##BX648841|KDM3A|55818|lysine (K)-specific demethylase 3A##NM_001146688|KDM3A|55818|lysine (K)-specific demethylase 3A	0.0	
chr4	132013190	132013321	reg1022374.p1	6.206	+	NM_001099783	-1995974	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-1998388	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-1998665	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	2057201	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	2060028	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	3109663	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.751293	CTCF.p2:-1:0.751
chr12	8437790	8437922	reg1025738.p1	6.205	+	BC042608 AK001270 NM_018088	-57653	-	TSC_hg19_v1_chr12_+_8332811 AK096301 BC048994 AK311411 BC034777	-105030	+	NM_001004328	-112707	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	170746	+	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	228375	+	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	255618	-	BC042608|FAM90A1|55138|family with sequence similarity 90, member A1##AK001270|FAM90A1|55138|family with sequence similarity 90, member A1##NM_018088|FAM90A1|55138|family with sequence similarity 90, member A1##AK096301|FAM66C|440078|family with sequence similarity 66, member C##BC048994|FAM66C|440078|family with sequence similarity 66, member C##BC034777|FAM66C|440078|family with sequence similarity 66, member C##NM_001004328|ZNF705A|440077|zinc finger protein 705A##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E	0.0	
chr13	100072609	100072789	reg1021873.p1	6.205	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-113001	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-162085	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-219580	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	81001	+	TSC_hg19_v1_chr13_+_100153777 BC130293	81083	+	BC041830 TSC_hg19_v1_chr13_+_100229390	156678	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.0	
chr20	5984100	5984258	reg1024137.p1	6.205	+	AJ439063 NM_032485 NM_182802 AK297806 BC101054 BC101055 BC101056 BC101057 BC080656 AY158211 BC005170 AK314654	-52696	+	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	-53056	-	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	-92053	+	TSC_hg19_v1_chr20_+_5986738 NM_019095	2481	+	TSC_hg19_v1_chr20_+_5986768 BC069010 AB463464 DQ386730	2647	+	TSC_hg19_v1_chr20_+_5986970 AL832419	2790	+	AJ439063|MCM8|84515|minichromosome maintenance complex component 8##NM_032485|MCM8|84515|minichromosome maintenance complex component 8##NM_182802|MCM8|84515|minichromosome maintenance complex component 8##AK297806|MCM8|84515|minichromosome maintenance complex component 8##BC101054|MCM8|84515|minichromosome maintenance complex component 8##BC101055|MCM8|84515|minichromosome maintenance complex component 8##BC101056|MCM8|84515|minichromosome maintenance complex component 8##BC101057|MCM8|84515|minichromosome maintenance complex component 8##BC080656|MCM8|84515|minichromosome maintenance complex component 8##AY158211|MCM8|84515|minichromosome maintenance complex component 8##BC005170|MCM8|84515|minichromosome maintenance complex component 8##AK314654|MCM8|84515|minichromosome maintenance complex component 8##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##NM_019095|CRLS1|54675|cardiolipin synthase 1##BC069010|CRLS1|54675|cardiolipin synthase 1##DQ386730|CRLS1|54675|cardiolipin synthase 1##AL832419|CRLS1|54675|cardiolipin synthase 1	0.829434	CTCF.p2:-12:0.829
chr3	28359060	28359178	reg1023148.p1	6.205	+	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	-76021	+	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	-594918	-	AB031038 BC131712 NM_005442 AB463608 BC037568	-595326	-	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	31263	-	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	31442	-	NM_001040432	72867	+	CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2	0.066263	
chr3	68927603	68927747	reg1025554.p1	6.205	+	NM_213609 AK289668 AK290446 BC025746	-874270	+	AY325114 NM_001252216	-886942	+	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	-1222525	+	BC031566 TSC_hg19_v1_chr3_-_68981699 AY325117 NM_001005527 NM_182522	54042	-	TSC_hg19_v1_chr3_-_69037499 AK123213	109831	-	TSC_hg19_v1_chr3_-_69062806 BC060887 NM_173654 AK304102 BX648818	135126	-	NM_213609|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AK289668|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AK290446|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##BC025746|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AY325114|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##NM_001252216|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##BC031566|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##AY325117|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##NM_001005527|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##NM_182522|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##AK123213|C3orf64|285203|chromosome 3 open reading frame 64##BC060887|C3orf64|285203|chromosome 3 open reading frame 64##NM_173654|C3orf64|285203|chromosome 3 open reading frame 64##AK304102|C3orf64|285203|chromosome 3 open reading frame 64##BX648818|C3orf64|285203|chromosome 3 open reading frame 64	0.970845	CTCF.p2:-2:0.971
chr5	61229963	61230095	reg1022446.p2	6.205	+	AK094862 NM_173667	-296394	+	TSC_hg19_v1_chr5_+_60628085 NM_020928	-601931	+	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	-771762	-	TSC_hg19_v1_chr5_+_61601970 NM_001098511 NM_001243952 NM_001243953 NM_004520	371944	+	TSC_hg19_v1_chr5_+_61602066 BC047544	372053	+	TSC_hg19_v1_chr5_+_61602278 AK297347 AK307880 EF560716 EF560728 EU832810 GQ129246 AK315866	372241	+	AK094862|C5orf64|285668|chromosome 5 open reading frame 64##NM_173667|C5orf64|285668|chromosome 5 open reading frame 64##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6##BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##NM_001098511|KIF2A|3796|kinesin heavy chain member 2A##NM_001243952|KIF2A|3796|kinesin heavy chain member 2A##NM_001243953|KIF2A|3796|kinesin heavy chain member 2A##NM_004520|KIF2A|3796|kinesin heavy chain member 2A##BC047544|KIF2A|3796|kinesin heavy chain member 2A##AK297347|KIF2A|3796|kinesin heavy chain member 2A##AK307880|KIF2A|3796|kinesin heavy chain member 2A##EF560716|KIF2A|3796|kinesin heavy chain member 2A##EF560728|KIF2A|3796|kinesin heavy chain member 2A##EU832810|KIF2A|3796|kinesin heavy chain member 2A##GQ129246|KIF2A|3796|kinesin heavy chain member 2A##AK315866|KIF2A|3796|kinesin heavy chain member 2A	0.922127	CTCF.p2:15:0.922
chrX	99767615	99767724	reg1022144.p1	6.205	+	EF676096 NM_001105243 NM_001184880 NM_020766 TSC_hg19_v1_chrX_-_99665272	-102396	-	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	-3628699	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	-3827715	+	NM_022144 AF191770 BC034030 AF291656 AF234259 AY358706 AB055421 AB590911 CU689814	72232	+	BT006977 CR457115 AB527646 DQ890668 DQ893849 TSC_hg19_v1_chrX_-_99891804 AF053453 AK299176 AF133426 AK309581 AY358825 AB097016 AF043906 U84895 BC012389 NM_003270 AK075072 AB209876 AK315773 AK300852	124099	-	NM_014467 TSC_hg19_v1_chrX_+_99899195 AK075462 AF060567 AF393649	131563	+	EF676096|PCDH19|57526|protocadherin 19##NM_001105243|PCDH19|57526|protocadherin 19##NM_001184880|PCDH19|57526|protocadherin 19##NM_020766|PCDH19|57526|protocadherin 19##NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_022144|TNMD|64102|tenomodulin##AF191770|TNMD|64102|tenomodulin##BC034030|TNMD|64102|tenomodulin##AF291656|TNMD|64102|tenomodulin##AF234259|TNMD|64102|tenomodulin##AY358706|TNMD|64102|tenomodulin##AB055421|TNMD|64102|tenomodulin##BT006977|TSPAN6|7105|tetraspanin 6##CR457115|TSPAN6|7105|tetraspanin 6##DQ890668|TSPAN6|7105|tetraspanin 6##DQ893849|TSPAN6|7105|tetraspanin 6##AF053453|TSPAN6|7105|tetraspanin 6##AK299176|TSPAN6|7105|tetraspanin 6##AF133426|TSPAN6|7105|tetraspanin 6##AK309581|TSPAN6|7105|tetraspanin 6##AY358825|TSPAN6|7105|tetraspanin 6##AB097016|TSPAN6|7105|tetraspanin 6##AF043906|TSPAN6|7105|tetraspanin 6##U84895|TSPAN6|7105|tetraspanin 6##BC012389|TSPAN6|7105|tetraspanin 6##NM_003270|TSPAN6|7105|tetraspanin 6##AK075072|TSPAN6|7105|tetraspanin 6##AB209876|TSPAN6|7105|tetraspanin 6##AK315773|TSPAN6|7105|tetraspanin 6##AK300852|TSPAN6|7105|tetraspanin 6##NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2	0.073606	
chr10	12172401	12172581	reg1023478.p2	6.204	+	TSC_hg19_v1_chr10_+_12171686 NM_001142627 NM_001142628 NM_018144 AK301841 AK292295 BC026179 AF346603 AK057532 AK022640	-838	+	TSC_hg19_v1_chr10_+_12110968 BC002477 BC007955 AB046850 AK309810 CU675875	-61484	+	TSC_hg19_v1_chr10_+_12110952 NM_018706	-61555	+	TSC_hg19_v1_chr10_-_12237861 AF218818 AK291131 AF155832 AF161464	65375	-	TSC_hg19_v1_chr10_+_12237965 NM_006023 D14878 AK225634	65470	+	BC000025 TSC_hg19_v1_chr10_-_12238092 AK314144 NM_014142	65617	-	NM_001142627|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##NM_001142628|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##NM_018144|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AK301841|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AK292295|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##BC026179|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AF346603|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AK057532|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AK022640|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##BC002477|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1##BC007955|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1##AK309810|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1##NM_018706|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1##AF218818|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5##AK291131|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5##AF155832|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5##AF161464|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5##NM_006023|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##D14878|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK225634|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##BC000025|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5##AK314144|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5##NM_014142|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5	0.0	
chr3	76619722	76619860	reg1025402.p1	6.204	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-785089	-	NM_001128223	-785537	-	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	-898305	+	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	469489	+	TSC_hg19_v1_chr3_-_78666943 AK025535	2047194	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	2448796	-	AK123776|ZNF717|100131827|zinc finger protein 717##NM_001128223|ZNF717|100131827|zinc finger protein 717##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)	0.870851	CTCF.p2:8:0.871
chr6	38002246	38002348	reg1024913.p1	6.204	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	-214607	+	TSC_hg19_v1_chr6_+_37787274 NM_021943	-215007	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	-336591	-	BC101354 BC101355 BC101356 BC101357 AK057507 NM_001172418 NM_152733	561505	-	AB067467 TSC_hg19_v1_chr6_-_38607611	605308	-	TSC_hg19_v1_chr6_-_38607697 BX537534	605369	-	AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##BC101354|BTBD9|114781|BTB (POZ) domain containing 9##BC101355|BTBD9|114781|BTB (POZ) domain containing 9##BC101356|BTBD9|114781|BTB (POZ) domain containing 9##BC101357|BTBD9|114781|BTB (POZ) domain containing 9##AK057507|BTBD9|114781|BTB (POZ) domain containing 9##NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9##NM_152733|BTBD9|114781|BTB (POZ) domain containing 9##AB067467|BTBD9|114781|BTB (POZ) domain containing 9##BX537534|BTBD9|114781|BTB (POZ) domain containing 9	0.879492	CTCF.p2:-15:0.879
chr7	147244538	147244628	reg1021654.p2	6.204	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-1430699	+	NM_014141	-1431131	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-2711447	-	TSC_hg19_v1_chr7_+_148036552 CR933671	791982	+	BC021251 NM_145304	1043073	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	1151357	+	AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##CR933671|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1	0.262505	CTCF.p2:-11:0.263
chrX	122584221	122584353	reg1018948.p1	6.204	+	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	-266047	+	TSC_hg19_v1_chrX_+_120181464 BC050732 NM_012084 AK313356	-2402847	+	BC029540 NM_001080141 NM_001080146	-2464650	-	TSC_hg19_v1_chrX_-_122866885 AK001758	282596	-	TSC_hg19_v1_chrX_-_122866897 NM_001081550	282610	-	TSC_hg19_v1_chrX_+_122993844 AK313883 NM_001204401 NM_001167 AK309704 U32974 BC032729	409655	+	NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC050732|GLUD2|2747|glutamate dehydrogenase 2##NM_012084|GLUD2|2747|glutamate dehydrogenase 2##AK313356|GLUD2|2747|glutamate dehydrogenase 2##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##AK001758|THOC2|57187|THO complex 2##NM_001081550|THOC2|57187|THO complex 2##AK313883|XIAP|331|X-linked inhibitor of apoptosis##NM_001204401|XIAP|331|X-linked inhibitor of apoptosis##NM_001167|XIAP|331|X-linked inhibitor of apoptosis##AK309704|XIAP|331|X-linked inhibitor of apoptosis##U32974|XIAP|331|X-linked inhibitor of apoptosis##BC032729|XIAP|331|X-linked inhibitor of apoptosis	0.23321	CTCF.p2:-32:0.233
chr13	50571572	50571671	reg1020819.p2	6.203	+	TSC_hg19_v1_chr13_+_50571212 NM_001007278 NM_005798 NM_052811 NM_213590 AY455758 AY764035 AK314496 AF241850 BC029514 AY191002 BC003579 BC063407 AF220127 AL360196	-441	+	TSC_hg19_v1_chr13_-_50510444 AF052154 AF055016 BC022519 AK316576 BC007076 AK308818 AF334405 AK290576 NM_001127482 NM_020456	-61104	-	TSC_hg19_v1_chr13_-_50367200 BC035090 NM_002267	-204498	-	AY169387 AY169388 NM_173605 NM_199464 AK313401 AY129654 AY129653 BC020887 BC032343 AY190921 AY190922 AL832695 CU689344 DQ891601 DQ894796	17888	+	TSC_hg19_v1_chr13_-_50656128 BC038090 AF264787 Y15228 BC022349 BC006995 BC026275 BC030971 BC070292 BC055417 BC017819 BC022282	84528	-	AJ412023 AJ412024 AJ412025 AJ412026 AJ412038 AJ412039 AJ412054 AJ412055 AJ412056 AJ412057 AJ412058 AJ412059 AJ412060 AJ412061 AJ412062 Y15227 TSC_hg19_v1_chr13_+_50656364 BC004131 AK312167 BC020692 AK095311	84724	+	NM_001007278|TRIM13|10206|tripartite motif containing 13##NM_005798|TRIM13|10206|tripartite motif containing 13##NM_052811|TRIM13|10206|tripartite motif containing 13##NM_213590|TRIM13|10206|tripartite motif containing 13##AY455758|TRIM13|10206|tripartite motif containing 13##AY764035|TRIM13|10206|tripartite motif containing 13##AK314496|TRIM13|10206|tripartite motif containing 13##AF241850|TRIM13|10206|tripartite motif containing 13##BC029514|TRIM13|10206|tripartite motif containing 13##AY191002|TRIM13|10206|tripartite motif containing 13##BC003579|TRIM13|10206|tripartite motif containing 13##BC063407|TRIM13|10206|tripartite motif containing 13##AF220127|TRIM13|10206|tripartite motif containing 13##AL360196|TRIM13|10206|tripartite motif containing 13##AF052154|SPRYD7|57213|SPRY domain containing 7##AF055016|SPRYD7|57213|SPRY domain containing 7##BC022519|SPRYD7|57213|SPRY domain containing 7##AK316576|SPRYD7|57213|SPRY domain containing 7##BC007076|SPRYD7|57213|SPRY domain containing 7##AK308818|SPRYD7|57213|SPRY domain containing 7##AF334405|SPRYD7|57213|SPRY domain containing 7##AK290576|SPRYD7|57213|SPRY domain containing 7##NM_001127482|SPRYD7|57213|SPRY domain containing 7##NM_020456|SPRYD7|57213|SPRY domain containing 7##BC035090|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##NM_002267|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AY169387|KCNRG|283518|potassium channel regulator##AY169388|KCNRG|283518|potassium channel regulator##NM_173605|KCNRG|283518|potassium channel regulator##NM_199464|KCNRG|283518|potassium channel regulator##AK313401|KCNRG|283518|potassium channel regulator##AY129654|KCNRG|283518|potassium channel regulator##AY129653|KCNRG|283518|potassium channel regulator##BC020887|KCNRG|283518|potassium channel regulator##BC032343|KCNRG|283518|potassium channel regulator##AY190921|KCNRG|283518|potassium channel regulator##AY190922|KCNRG|283518|potassium channel regulator##AL832695|TRIM13|10206|tripartite motif containing 13##DQ891601|KCNRG|283518|potassium channel regulator##DQ894796|KCNRG|283518|potassium channel regulator##BC038090|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AF264787|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##Y15228|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##BC070292|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##BC055417|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AJ412023|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412024|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412061|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412062|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##Y15227|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC020692|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AK095311|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)	0.032245	
chr16	22330182	22330317	reg1023852.p2	6.203	+	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	-21501	+	TSC_hg19_v1_chr16_+_22217630 NM_013302 AK308757 BC032665	-112576	+	AK098260 AK128606 AK307544 NM_173615	-226388	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	55546	-	NM_001135865 BC036263 AK296338 CU690320	194733	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	495253	+	AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase##BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK098260|VWA3A|146177|von Willebrand factor A domain containing 3A##AK128606|VWA3A|146177|von Willebrand factor A domain containing 3A##AK307544|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_173615|VWA3A|146177|von Willebrand factor A domain containing 3A##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001135865|LOC100132247|100132247|nuclear pore complex interacting protein related gene##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296338|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2	0.938925	CTCF.p2:-20:0.939
chr1	185650320	185650415	reg1022369.p1	6.202	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-363897	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-364048	-	TSC_hg19_v1_chr1_+_185126418 AK291443	-523971	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	53209	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	615040	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	693890	-	NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)	0.974006	CTCF.p2:-1:0.974
chr14	105999275	105999375	reg1022866.p1	6.202	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-6384	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-41689	+	BX248038 NM_001134877	-42806	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	93011	-	BC040042 TSC_hg19_v1_chr14_-_106110945	111598	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	111791	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.621149	CTCF.p2:-3:0.621
chr15	85369683	85369803	reg1023543.p2	6.202	+	AY044449 NM_020778	-9833	+	TSC_hg19_v1_chr15_+_85291875 BC094688	-77881	+	TSC_hg19_v1_chr15_+_85291820 NM_014630	-77918	+	AK291997 AK296075 AK298369 AK296074 AK296119 AK309571 AK311387 AK309578 AF309632 NM_004213 NM_201651 BC029788	58168	+	TSC_hg19_v1_chr15_+_85523735 BC060762 AK074280 NM_001243137	153959	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	155494	+	AY044449|ALPK3|57538|alpha-kinase 3##NM_020778|ALPK3|57538|alpha-kinase 3##BC094688|ZNF592|9640|zinc finger protein 592##NM_014630|ZNF592|9640|zinc finger protein 592##AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC060762|PDE8A|5151|phosphodiesterase 8A##AK074280|PDE8A|5151|phosphodiesterase 8A##NM_001243137|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A	0.105221	
chr16	53807185	53807310	reg1022663.p1	6.201	+	TSC_hg19_v1_chr16_+_53738067 AK096554 AB051539 AK295196	-69179	+	NM_001080432	-69373	+	TSC_hg19_v1_chr16_-_53737760 BC136433 AK096333 AK308390 BC017977 CR749645 AK307929 EF565106 NM_001127897 NM_015272 AK304790	-69490	-	BC034328 TSC_hg19_v1_chr16_-_54319025	511717	-	TSC_hg19_v1_chr16_+_54319531 AK309303	512274	+	DQ892008 EU176666 TSC_hg19_v1_chr16_-_54320043	512759	-	AK096554|FTO|79068|fat mass and obesity associated##AB051539|FTO|79068|fat mass and obesity associated##AK295196|FTO|79068|fat mass and obesity associated##NM_001080432|FTO|79068|fat mass and obesity associated##BC136433|RPGRIP1L|23322|RPGRIP1-like##AK096333|RPGRIP1L|23322|RPGRIP1-like##AK308390|RPGRIP1L|23322|RPGRIP1-like##BC017977|RPGRIP1L|23322|RPGRIP1-like##CR749645|RPGRIP1L|23322|RPGRIP1-like##AK307929|RPGRIP1L|23322|RPGRIP1-like##EF565106|RPGRIP1L|23322|RPGRIP1-like##NM_001127897|RPGRIP1L|23322|RPGRIP1-like##NM_015272|RPGRIP1L|23322|RPGRIP1-like##AK304790|RPGRIP1L|23322|RPGRIP1-like##BC034328|IRX3|79191|iroquois homeobox 3##DQ892008|IRX3|79191|iroquois homeobox 3##EU176666|IRX3|79191|iroquois homeobox 3	0.932426	CTCF.p2:-4:0.932
chr18	14395653	14395788	reg1021260.p2	6.201	+	TSC_hg19_v1_chr18_+_14179298 BC127726	-216411	+	BC010705 AK096748 BC024227 BC037787 NM_145287	-263263	-	AK315319 BC094710 NM_000529 AK289381	-480184	-	BC140940 BX649118 AK307658 NM_001137671	147824	-	AF269088 NM_001145029 BC028407	352565	+	TSC_hg19_v1_chr18_-_18691640 AK307388	4295918	-	BC127726|ANKRD20A5P|440482|ankyrin repeat domain 20 family, member A5, pseudogene##BC010705|ZNF519|162655|zinc finger protein 519##AK096748|ZNF519|162655|zinc finger protein 519##BC024227|ZNF519|162655|zinc finger protein 519##BC037787|ZNF519|162655|zinc finger protein 519##NM_145287|ZNF519|162655|zinc finger protein 519##AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC140940|POTEC|388468|POTE ankyrin domain family, member C##BX649118|POTEC|388468|POTE ankyrin domain family, member C##AK307658|POTEC|388468|POTE ankyrin domain family, member C##NM_001137671|POTEC|388468|POTE ankyrin domain family, member C##AF269088|ANKRD30B|374860|ankyrin repeat domain 30B##NM_001145029|ANKRD30B|374860|ankyrin repeat domain 30B##BC028407|ANKRD30B|374860|ankyrin repeat domain 30B##AK307388|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1	0.67052	CTCF.p2:2:0.671
chr8	40795079	40795203	reg1027119.p1	6.201	+	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	-39804	-	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	-784123	+	AK128691 NM_194294	-1002668	+	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	371889	-	TSC_hg19_v1_chr8_+_41348077 NM_001174124 NM_016099	552932	+	TSC_hg19_v1_chr8_+_41348100 AK026613	552958	+	BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1##NM_001174124|GOLGA7|51125|golgin A7##NM_016099|GOLGA7|51125|golgin A7##AK026613|GOLGA7|51125|golgin A7	0.986498	CTCF.p2:-12:0.986
chr2	24836035	24836164	reg1023731.p1	6.200	+	NM_003743 NM_147223 NM_147233 AJ000881 AJ000882 U59302	-28722	+	TSC_hg19_v1_chr2_-_24583385 AB033082 BC146779 AF182198 AF182199 BC038963 NM_006277 NM_019595 NM_147152	-252619	-	BC050462 NM_001040710	-438128	+	TSC_hg19_v1_chr2_-_25016225 CU687260 BC073803 NM_001013663	180139	-	NM_001199803 AK027859 TSC_hg19_v1_chr2_+_25016332 NM_024322 BC002870 AK315483	180172	+	HQ258684 AK027857 BC126235 BC144119 AF033861 NM_004036 AK122926	305858	-	NM_003743|NCOA1|8648|nuclear receptor coactivator 1##NM_147223|NCOA1|8648|nuclear receptor coactivator 1##NM_147233|NCOA1|8648|nuclear receptor coactivator 1##AJ000881|NCOA1|8648|nuclear receptor coactivator 1##AJ000882|NCOA1|8648|nuclear receptor coactivator 1##U59302|NCOA1|8648|nuclear receptor coactivator 1##AB033082|ITSN2|50618|intersectin 2##BC146779|ITSN2|50618|intersectin 2##AF182198|ITSN2|50618|intersectin 2##AF182199|ITSN2|50618|intersectin 2##BC038963|ITSN2|50618|intersectin 2##NM_006277|ITSN2|50618|intersectin 2##NM_019595|ITSN2|50618|intersectin 2##NM_147152|ITSN2|50618|intersectin 2##BC050462|C2orf84|653140|chromosome 2 open reading frame 84##NM_001040710|C2orf84|653140|chromosome 2 open reading frame 84##BC073803|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001013663|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001199803|CENPO|79172|centromere protein O##AK027859|CENPO|79172|centromere protein O##NM_024322|CENPO|79172|centromere protein O##BC002870|CENPO|79172|centromere protein O##AK315483|CENPO|79172|centromere protein O##HQ258684|ADCY3|109|adenylate cyclase 3##AK027857|ADCY3|109|adenylate cyclase 3##BC126235|ADCY3|109|adenylate cyclase 3##BC144119|ADCY3|109|adenylate cyclase 3##AF033861|ADCY3|109|adenylate cyclase 3##NM_004036|ADCY3|109|adenylate cyclase 3##AK122926|ADCY3|109|adenylate cyclase 3	0.931865	CTCF.p2:5:0.932
chr3	123047933	123048040	reg1002082.p2	6.200	+	NM_012430 TSC_hg19_v1_chr3_+_122920787 AK315771 AF100749	-127196	+	NM_006810 TSC_hg19_v1_chr3_+_122785922 BC001625 D49490	-262068	+	TSC_hg19_v1_chr3_-_122746605 AK309848	-301378	-	AK303070 NM_001199642	87202	-	AB527359 NM_183357	119405	-	TSC_hg19_v1_chr3_-_123303927 CU687458 AK289983 NM_198402 AK125375 BC060839 AY191814 BC049369	255947	-	NM_012430|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK315771|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AF100749|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##NM_006810|PDIA5|10954|protein disulfide isomerase family A, member 5##BC001625|PDIA5|10954|protein disulfide isomerase family A, member 5##D49490|PDIA5|10954|protein disulfide isomerase family A, member 5##AK309848|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK303070|ADCY5|111|adenylate cyclase 5##NM_001199642|ADCY5|111|adenylate cyclase 5##NM_183357|ADCY5|111|adenylate cyclase 5##AK289983|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##NM_198402|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC060839|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AY191814|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC049369|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	0.0	
chr3	48595723	48595833	reg1021304.p2	6.200	+	DQ891635 DQ894825 BC010269 NM_004567 AF108765 D49818 TSC_hg19_v1_chr3_-_48594237 AK299097 AK312623 AY707863 AY714243 AY756062 AY756063 AY756064	-1513	-	AK124652 TSC_hg19_v1_chr3_-_48541588 AB527510 AK075441 AF520698 NM_016479	-54204	-	TSC_hg19_v1_chr3_-_48514495 AB097007 BC020279 AL117413 AK310083 AL832568 AF151051 BC001463 AK027728 AK298799	-81247	-	TSC_hg19_v1_chr3_-_48598563 AK298732	2779	-	BC002647 BC022096 NM_033199 TSC_hg19_v1_chr3_-_48601218	5432	-	NM_000094 L02870 TSC_hg19_v1_chr3_-_48632733	36916	-	DQ891635|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##DQ894825|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##BC010269|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##NM_004567|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AF108765|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##D49818|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK299097|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK312623|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY707863|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY714243|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756062|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756063|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756064|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK124652|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK075441|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF520698|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##NM_016479|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AB097007|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC020279|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL117413|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL832568|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF151051|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC001463|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK298799|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK298732|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##BC002647|UCN2|90226|urocortin 2##BC022096|UCN2|90226|urocortin 2##NM_033199|UCN2|90226|urocortin 2##NM_000094|COL7A1|1294|collagen, type VII, alpha 1##L02870|COL7A1|1294|collagen, type VII, alpha 1	0.457964	CTCF.p2:-3:0.458
chr6	133282894	133283021	reg1025220.p1	6.200	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	-147238	+	TSC_hg19_v1_chr6_+_133135707 AK096147 NM_001016 D28378 X53505	-147250	+	AK124442 BC069570 AK293853 TSC_hg19_v1_chr6_-_133119740 NM_052831 AK289918	-163256	-	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	279534	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	279575	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	927297	+	AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##AK096147|SNORA33|594839|small nucleolar RNA, H/ACA box 33##NM_001016|RPS12|6206|ribosomal protein S12##D28378|RPS12|6206|ribosomal protein S12##X53505|RPS12|6206|ribosomal protein S12##AK124442|C6orf192|116843|chromosome 6 open reading frame 192##BC069570|C6orf192|116843|chromosome 6 open reading frame 192##AK293853|C6orf192|116843|chromosome 6 open reading frame 192##NM_052831|C6orf192|116843|chromosome 6 open reading frame 192##AK289918|C6orf192|116843|chromosome 6 open reading frame 192##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21	0.536025	CTCF.p2:0:0.536
chr22	37894485	37894583	reg1022479.p1	6.199	+	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	-12189	-	TSC_hg19_v1_chr22_-_37823515 NM_052906	-71006	-	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	-215958	+	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	20773	-	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	61939	+	M87842 BC059782 NM_006498 CR456512	81466	-	CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2##BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10##NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M87842|LGALS2|3957|lectin, galactoside-binding, soluble, 2##BC059782|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_006498|LGALS2|3957|lectin, galactoside-binding, soluble, 2##CR456512|LGALS2|3957|lectin, galactoside-binding, soluble, 2	0.941043	CTCF.p2:11:0.941
chr5	121828519	121828631	reg1025562.p1	6.199	+	BC029465 TSC_hg19_v1_chr5_-_121814783	-13792	-	TSC_hg19_v1_chr5_+_121647890 DQ227317 NM_001242935 NM_005460 BC094759 BC040552 AK304646 AK310835 AF076929 BC033743	-180717	+	AK299687 TSC_hg19_v1_chr5_+_121647434	-181163	+	TSC_hg19_v1_chr5_+_122110737 AK023716 NM_003100	282169	+	AK023581 TSC_hg19_v1_chr5_+_122110776 BC003382 AF065482 AK222968	282194	+	TSC_hg19_v1_chr5_+_122110786 AY272044 AK002170 AB464236 BT009841 DQ890933 DQ894096 AF043453	282237	+	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein##NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein##NM_005460|SNCAIP|9627|synuclein, alpha interacting protein##BC094759|SNCAIP|9627|synuclein, alpha interacting protein##BC040552|SNCAIP|9627|synuclein, alpha interacting protein##AK304646|SNCAIP|9627|synuclein, alpha interacting protein##AK310835|SNCAIP|9627|synuclein, alpha interacting protein##AF076929|SNCAIP|9627|synuclein, alpha interacting protein##BC033743|SNCAIP|9627|synuclein, alpha interacting protein##AK299687|SNCAIP|9627|synuclein, alpha interacting protein##AK023716|SNX2|6643|sorting nexin 2##NM_003100|SNX2|6643|sorting nexin 2##AK023581|SNX2|6643|sorting nexin 2##BC003382|SNX2|6643|sorting nexin 2##AF065482|SNX2|6643|sorting nexin 2##AK222968|SNX2|6643|sorting nexin 2##AY272044|SNX2|6643|sorting nexin 2##AK002170|SNX2|6643|sorting nexin 2##BT009841|SNX2|6643|sorting nexin 2##DQ890933|SNX2|6643|sorting nexin 2##DQ894096|SNX2|6643|sorting nexin 2##AF043453|SNX2|6643|sorting nexin 2	0.431254	CTCF.p2:-2:0.431
chr10	23805557	23805707	reg1027910.p1	6.198	+	AB188491 NM_001145373 TSC_hg19_v1_chr10_+_23728216	-77422	+	BC035732 NM_153714	-171861	-	AB463998 NM_178161	-324174	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	178045	+	AK091142 AX746804 NM_001098501 NM_019590 TSC_hg19_v1_chr10_+_24497850	692156	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	692462	+	AB188491|OTUD1|220213|OTU domain containing 1##NM_001145373|OTUD1|220213|OTU domain containing 1##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67##NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a##AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217##AK091142|KIAA1217|56243|KIAA1217##NM_001098501|KIAA1217|56243|KIAA1217##NM_019590|KIAA1217|56243|KIAA1217##AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217	0.032925	
chr1	3593664	3593845	reg1022150.p2	6.198	+	TSC_hg19_v1_chr1_+_3569108 BC117251 BC117253 NM_001204184 NM_001204185 NM_001204186 NM_001204187 NM_001204188 NM_005427 Y11416	-24628	+	CU678066 AB034912 AK000437 AK225525 BC002611 BC086311 TSC_hg19_v1_chr1_-_3566668 AK302397 NM_017818	-27138	-	AK298343 TSC_hg19_v1_chr1_+_3541608 AK289919 BC019034	-52145	+	TSC_hg19_v1_chr1_+_3607235 AB055065 AB055066 AY040827 AY040828 AY040829 NM_001126240 NM_001126241 NM_001126242 NM_001204189 NM_001204190 NM_001204191 AK304177 AK304784	13504	+	AK310432 NM_001204192 AK302118	20861	+	TSC_hg19_v1_chr1_-_3663940 AB007964 BC035073 BC062467 BC089039	70163	-	BC117251|TP73|7161|tumor protein p73##BC117253|TP73|7161|tumor protein p73##NM_001204184|TP73|7161|tumor protein p73##NM_001204185|TP73|7161|tumor protein p73##NM_001204186|TP73|7161|tumor protein p73##NM_001204187|TP73|7161|tumor protein p73##NM_001204188|TP73|7161|tumor protein p73##NM_005427|TP73|7161|tumor protein p73##Y11416|TP73|7161|tumor protein p73##AB034912|WRAP73|49856|WD repeat containing, antisense to TP73##AK000437|WRAP73|49856|WD repeat containing, antisense to TP73##AK225525|WRAP73|49856|WD repeat containing, antisense to TP73##BC002611|WRAP73|49856|WD repeat containing, antisense to TP73##BC086311|WRAP73|49856|WD repeat containing, antisense to TP73##AK302397|WRAP73|49856|WD repeat containing, antisense to TP73##NM_017818|WRAP73|49856|WD repeat containing, antisense to TP73##AK298343|TPRG1L|127262|tumor protein p63 regulated 1-like##AK289919|TPRG1L|127262|tumor protein p63 regulated 1-like##BC019034|TPRG1L|127262|tumor protein p63 regulated 1-like##AB055065|TP73|7161|tumor protein p73##AB055066|TP73|7161|tumor protein p73##AY040827|TP73|7161|tumor protein p73##AY040828|TP73|7161|tumor protein p73##AY040829|TP73|7161|tumor protein p73##NM_001126240|TP73|7161|tumor protein p73##NM_001126241|TP73|7161|tumor protein p73##NM_001126242|TP73|7161|tumor protein p73##NM_001204189|TP73|7161|tumor protein p73##NM_001204190|TP73|7161|tumor protein p73##NM_001204191|TP73|7161|tumor protein p73##AK304177|TP73|7161|tumor protein p73##AK304784|TP73|7161|tumor protein p73##AK310432|TP73|7161|tumor protein p73##NM_001204192|TP73|7161|tumor protein p73##AK302118|TP73|7161|tumor protein p73##AB007964|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC035073|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC089039|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)	0.069088	
chr15	84720059	84720174	reg1022764.p1	6.198	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-397289	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-603888	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-604056	+	NM_001243531	121125	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	424165	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	477356	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.800468	CTCF.p2:-6:0.800
chr15	92821123	92821272	reg1024157.p1	6.198	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-423630	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	-424100	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	-424254	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	116002	+	AK057393 NM_153040	193709	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	377682	-	AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B	0.991435	CTCF.p2:-21:0.991
chr19	4400756	4400854	reg1007019.p2	6.198	+	BC001270 TSC_hg19_v1_chr19_-_4400513 AK315450 BC098565 AK299166 NM_001199943 NM_003025	-252	-	TSC_hg19_v1_chr19_-_4400419 AY364240 CR542087 AB527297 DQ891258 DQ894444 U65999 X99656 AK097616 NM_001199944	-412	-	NM_001159846 NM_032868 AK027887 AK308468 TSC_hg19_v1_chr19_+_4343562 BC032652	-57246	+	BC067093 NM_005483 BC052620 TSC_hg19_v1_chr19_+_4402664 BC041606 AB527824 U20979 BC005813 BC011560	1911	+	AF272894 BC008288 NM_001171091	54484	-	AF272893 NM_025241	56984	-	BC001270|SH3GL1|6455|SH3-domain GRB2-like 1##AK315450|SH3GL1|6455|SH3-domain GRB2-like 1##BC098565|SH3GL1|6455|SH3-domain GRB2-like 1##AK299166|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199943|SH3GL1|6455|SH3-domain GRB2-like 1##NM_003025|SH3GL1|6455|SH3-domain GRB2-like 1##AY364240|SH3GL1|6455|SH3-domain GRB2-like 1##CR542087|SH3GL1|6455|SH3-domain GRB2-like 1##DQ891258|SH3GL1|6455|SH3-domain GRB2-like 1##DQ894444|SH3GL1|6455|SH3-domain GRB2-like 1##U65999|SH3GL1|6455|SH3-domain GRB2-like 1##X99656|SH3GL1|6455|SH3-domain GRB2-like 1##AK097616|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199944|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001159846|MPND|84954|MPN domain containing##NM_032868|MPND|84954|MPN domain containing##AK027887|MPND|84954|MPN domain containing##AK308468|MPND|84954|MPN domain containing##BC032652|MPND|84954|MPN domain containing##BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##AF272894|UBXN6|80700|UBX domain protein 6##BC008288|UBXN6|80700|UBX domain protein 6##NM_001171091|UBXN6|80700|UBX domain protein 6##AF272893|UBXN6|80700|UBX domain protein 6##NM_025241|UBXN6|80700|UBX domain protein 6	0.807263	CTCF.p2:-60:0.807
chr10	13141696	13141842	reg1021188.p2	6.197	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	-98070	-	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-749992	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-750052	+	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	376	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	61799	+	BC018068 NM_145314	134558	-	AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10##BC018068|UCMA|221044|upper zone of growth plate and cartilage matrix associated##NM_145314|UCMA|221044|upper zone of growth plate and cartilage matrix associated	0.0	
chr12	14392530	14392670	reg1020783.p2	6.197	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-259614	-	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-1042871	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-1042883	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	126035	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	145672	+	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	328009	-	BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1	0.0	
chr1	27022116	27022239	reg1020619.p2	6.197	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	-149819	+	TSC_hg19_v1_chr1_+_26872335 AK092955	-149854	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-165842	+	NM_006015 NM_139135 AF231056	345	+	AB210022 AF219114 AB051293 AF265208 TSC_hg19_v1_chr1_+_27024003	1792	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	79111	+	AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.0	
chr17	37683629	37683754	reg1023503.p2	6.197	+	TSC_hg19_v1_chr17_+_37618267 AF227198 BC140854 AB462974	-65405	+	TSC_hg19_v1_chr17_+_37617760 NM_015083 NM_016507 AK302645	-65939	+	CU687400 BC131783 AF055994 BC006517 Y13467 BC060758 TSC_hg19_v1_chr17_-_37607519 AK299789 AK314185 NM_004774	-76270	-	TSC_hg19_v1_chr17_-_37764168 BC022481 NM_006160	80482	-	NM_032192 AF464196 TSC_hg19_v1_chr17_+_37783188	99493	+	TSC_hg19_v1_chr17_+_37783204 AK123112 AK127542 AK129537 AF435972	99518	+	AF227198|CDK12|51755|cyclin-dependent kinase 12##BC140854|CDK12|51755|cyclin-dependent kinase 12##NM_015083|CDK12|51755|cyclin-dependent kinase 12##NM_016507|CDK12|51755|cyclin-dependent kinase 12##AK302645|CDK12|51755|cyclin-dependent kinase 12##BC131783|MED1|5469|mediator complex subunit 1##AF055994|MED1|5469|mediator complex subunit 1##BC006517|MED1|5469|mediator complex subunit 1##Y13467|MED1|5469|mediator complex subunit 1##BC060758|MED1|5469|mediator complex subunit 1##AK299789|MED1|5469|mediator complex subunit 1##AK314185|MED1|5469|mediator complex subunit 1##NM_004774|MED1|5469|mediator complex subunit 1##BC022481|NEUROD2|4761|neurogenic differentiation 2##NM_006160|NEUROD2|4761|neurogenic differentiation 2##NM_032192|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF464196|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK123112|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK127542|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK129537|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435972|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B	0.997412	CTCF.p2:-15:0.997
chr18	45757005	45757099	reg1021404.p1	6.197	+	AM988836 AK296709 NM_001039360 EF120357	-93353	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	-299563	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	-299837	-	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	178657	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	308721	+	AK131394 NM_001190823	712095	-	AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7	0.129269	
chr20	13305732	13305870	reg1022879.p1	6.197	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	-103378	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	-316160	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-1407244	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	313763	-	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	459740	-	TSC_hg19_v1_chr20_+_13765698 NM_001039375 NM_024120 AK289781 AK091060 AX746757 BC073158 CU687252 BC005984	459952	+	NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_001039375|C20orf7|79133|chromosome 20 open reading frame 7##NM_024120|C20orf7|79133|chromosome 20 open reading frame 7##AK289781|C20orf7|79133|chromosome 20 open reading frame 7##AK091060|C20orf7|79133|chromosome 20 open reading frame 7##BC073158|C20orf7|79133|chromosome 20 open reading frame 7##BC005984|C20orf7|79133|chromosome 20 open reading frame 7	0.997939	CTCF.p2:-20:0.998
chr12	92539490	92539648	reg1025257.p1	6.196	+	NM_001920	-962764	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-962989	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-966258	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	74	-	AJ845165 AJ845166 NM_001025233	278165	+	AJ845168 NM_001025232	282354	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.0	
chr19	47987137	47987252	reg1021871.p1	6.196	+	TSC_hg19_v1_chr19_-_47975247 AK302552 NM_015063	-11919	-	TSC_hg19_v1_chr19_-_47975151 AK293836 AB029010 AK293860 AK293457	-12047	-	TSC_hg19_v1_chr19_-_47922785 NM_001009813 NM_020160	-64431	-	TSC_hg19_v1_chr19_-_47987466 AK298672 BC009249 AF105369 AK225419 AK023996	248	-	TSC_hg19_v1_chr19_-_47987477 NM_007059	304	-	TSC_hg19_v1_chr19_-_48018275 BT019568 U39412 AK308633 AK310185	31025	-	AK302552|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##NM_015063|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AK293836|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AB029010|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AK293860|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##AK293457|SLC8A2|6543|solute carrier family 8 (sodium/calcium exchanger), member 2##NM_001009813|MEIS3|56917|Meis homeobox 3##NM_020160|MEIS3|56917|Meis homeobox 3##AK298672|KPTN|11133|kaptin (actin binding protein)##BC009249|KPTN|11133|kaptin (actin binding protein)##AF105369|KPTN|11133|kaptin (actin binding protein)##AK225419|KPTN|11133|kaptin (actin binding protein)##AK023996|KPTN|11133|kaptin (actin binding protein)##NM_007059|KPTN|11133|kaptin (actin binding protein)##BT019568|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##U39412|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##AK308633|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##AK310185|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha	0.463076	CTCF.p2:-5:0.463
chr2	176231620	176231740	reg1023110.p2	6.196	+	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	-185376	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	-198785	-	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	-361667	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	635295	-	NM_001080458	717009	-	TSC_hg19_v1_chr2_+_176957451 NM_000523 AB463753	725864	+	CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715##NM_001080458|EVX2|344191|even-skipped homeobox 2##NM_000523|HOXD13|3239|homeobox D13	0.011278	
chr17	33219993	33220131	reg1026513.p1	6.195	+	NM_207313	-312295	+	BC133004 BC136710 BC142651 AK126768 NM_207454	-313710	-	AB528767 BC105073 BC105075 M57502 AK312183 NM_002981	-529847	-	CU693272 AK301773 TSC_hg19_v1_chr17_-_33288425 AK225729 BC026125 AK225728 D78333	68373	-	TSC_hg19_v1_chr17_-_33288480 AK302344 BC027591 NM_001193529 NM_001193530 NM_006584	68440	-	TSC_hg19_v1_chr17_+_33288558 AK315671 NM_052857 AK055707 AB590460 BC002913 BC011584 DQ892326 DQ895528	68527	+	NM_207313|TMEM132E|124842|transmembrane protein 132E##BC133004|C17orf102|400591|chromosome 17 open reading frame 102##BC136710|C17orf102|400591|chromosome 17 open reading frame 102##BC142651|C17orf102|400591|chromosome 17 open reading frame 102##AK126768|C17orf102|400591|chromosome 17 open reading frame 102##NM_207454|C17orf102|400591|chromosome 17 open reading frame 102##BC105073|CCL1|6346|chemokine (C-C motif) ligand 1##BC105075|CCL1|6346|chemokine (C-C motif) ligand 1##M57502|CCL1|6346|chemokine (C-C motif) ligand 1##AK312183|CCL1|6346|chemokine (C-C motif) ligand 1##NM_002981|CCL1|6346|chemokine (C-C motif) ligand 1##AK301773|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225729|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC026125|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225728|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##D78333|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK302344|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC027591|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193529|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193530|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_006584|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK315671|ZNF830|91603|zinc finger protein 830##NM_052857|ZNF830|91603|zinc finger protein 830##AK055707|ZNF830|91603|zinc finger protein 830##BC002913|ZNF830|91603|zinc finger protein 830##BC011584|ZNF830|91603|zinc finger protein 830##DQ892326|ZNF830|91603|zinc finger protein 830##DQ895528|ZNF830|91603|zinc finger protein 830	0.712223	CTCF.p2:23:0.712
chr21	47300465	47300572	reg1023637.p1	6.195	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	-30630	+	TSC_hg19_v1_chr21_+_47063638 AK310131	-236889	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-338186	-	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	101167	+	TSC_hg19_v1_chr21_+_47518062 NM_001849 NM_058174 NM_058175 BC065509	217532	+	AY029208 EU832113 EU832207 TSC_hg19_v1_chr21_+_47531438	230885	+	AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##AK310131|PCBP3|54039|poly(rC) binding protein 3##U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1##NM_001849|COL6A2|1292|collagen, type VI, alpha 2##NM_058174|COL6A2|1292|collagen, type VI, alpha 2##NM_058175|COL6A2|1292|collagen, type VI, alpha 2##BC065509|COL6A2|1292|collagen, type VI, alpha 2##AY029208|COL6A2|1292|collagen, type VI, alpha 2##EU832113|COL6A2|1292|collagen, type VI, alpha 2##EU832207|COL6A2|1292|collagen, type VI, alpha 2	0.979053	CTCF.p2:-7:0.967
chr12	3422913	3423020	reg1023180.p1	6.194	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-236404	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-353905	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-354372	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	177475	+	AK125333 TSC_hg19_v1_chr12_-_3601984	179019	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	439302	-	NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B	0.2379	CTCF.p2:-5:0.238
chr14	30991227	30991355	reg1023384.p1	6.194	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	-594437	-	TSC_hg19_v1_chr14_+_29241992 BX248251	-1749296	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-1754378	+	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	37069	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	100233	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	100253	+	AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1	0.967335	CTCF.p2:18:0.967
chr7	92617499	92617650	reg1023838.p1	6.194	+	TSC_hg19_v1_chr7_-_92465935 NM_001145306	-151640	-	AK313491 TSC_hg19_v1_chr7_-_92465884	-151676	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	-154354	-	AB095925 BC150249 AK122951 TSC_hg19_v1_chr7_-_92747292 BX647072 AF453311	129709	-	TSC_hg19_v1_chr7_-_92747328 BC065769 AF445355 NM_001193307 NM_017654	129752	-	AF474973 AY195582 AY195583 AY195584 AY195585 AY195586 AY195587 DQ068177 TSC_hg19_v1_chr7_-_92777683 AB095926 NM_152703	160096	-	NM_001145306|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AB095925|SAMD9|54809|sterile alpha motif domain containing 9##BC150249|SAMD9|54809|sterile alpha motif domain containing 9##AK122951|SAMD9|54809|sterile alpha motif domain containing 9##BX647072|SAMD9|54809|sterile alpha motif domain containing 9##AF453311|SAMD9|54809|sterile alpha motif domain containing 9##BC065769|SAMD9|54809|sterile alpha motif domain containing 9##AF445355|SAMD9|54809|sterile alpha motif domain containing 9##NM_001193307|SAMD9|54809|sterile alpha motif domain containing 9##NM_017654|SAMD9|54809|sterile alpha motif domain containing 9##AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like##DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like##AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like##NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like	0.23762	CTCF.p2:19:0.238
chrX	12720701	12720844	reg1005374.p3	6.194	+	AB002314 NM_014728 AK289694	-564182	+	NM_006800 AK025642	-943025	+	NM_001193270 AK300814	-944055	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	88725	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	88796	+	AK313858 BC033651 NM_016562 AF240467 AF245702	164426	+	AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7	0.980377	CTCF.p2:7:0.980
chr5	145671163	145671297	reg1023501.p1	6.193	+	TSC_hg19_v1_chr5_+_145583167 BC009537 BX647384 NM_018989 BC029648	-88064	+	AK128738 TSC_hg19_v1_chr5_+_145583122	-88113	+	TSC_hg19_v1_chr5_-_145562236 NM_020117	-108966	-	BC104923 BC112207 NM_002700 AB464668 EU446649 HQ258176	47400	+	TSC_hg19_v1_chr5_+_145826895 NM_001040006 NM_006706 AK304319 BC006109 BC014151 BC062351 AK126455 BC111727 AB209910 AB464301 AF017789	155664	+	AB463658 AY351676 NM_194251 AK122627	224483	-	BC009537|RBM27|54439|RNA binding motif protein 27##BX647384|RBM27|54439|RNA binding motif protein 27##NM_018989|RBM27|54439|RNA binding motif protein 27##BC029648|RBM27|54439|RNA binding motif protein 27##AK128738|RBM27|54439|RNA binding motif protein 27##NM_020117|LARS|51520|leucyl-tRNA synthetase##BC104923|POU4F3|5459|POU class 4 homeobox 3##BC112207|POU4F3|5459|POU class 4 homeobox 3##NM_002700|POU4F3|5459|POU class 4 homeobox 3##EU446649|POU4F3|5459|POU class 4 homeobox 3##HQ258176|POU4F3|5459|POU class 4 homeobox 3##NM_001040006|TCERG1|10915|transcription elongation regulator 1##NM_006706|TCERG1|10915|transcription elongation regulator 1##AK304319|TCERG1|10915|transcription elongation regulator 1##BC006109|TCERG1|10915|transcription elongation regulator 1##BC014151|TCERG1|10915|transcription elongation regulator 1##BC062351|TCERG1|10915|transcription elongation regulator 1##AK126455|TCERG1|10915|transcription elongation regulator 1##BC111727|TCERG1|10915|transcription elongation regulator 1##AB209910|TCERG1|10915|transcription elongation regulator 1##AF017789|TCERG1|10915|transcription elongation regulator 1##AY351676|GPR151|134391|G protein-coupled receptor 151##NM_194251|GPR151|134391|G protein-coupled receptor 151	0.544145	CTCF.p2:-8:0.544
chrX	151810592	151810684	reg1019007.p1	6.193	+	AF189259 BC109210 BC109211 NM_018558 AF144648	-3985	+	S62908 TSC_hg19_v1_chrX_-_151619798 BC028629 NM_000808	-190889	-	AY522506 BC004105 AK314161 NM_001011543 NM_001204811 NM_001251828 NM_021048	-503634	-	NM_005363 NM_175868 AK289437 BC067731 BC041599 BC109188 BX640600	56633	+	NM_001129826 BC119734 BC119735 AF080246 AF136715 NM_001080848 NM_001129828 NM_004909	67069	-	AK290443 BC108720 NM_005361 NM_175742 NM_175743	72458	+	AF189259|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##BC109210|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##BC109211|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##NM_018558|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##AF144648|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##S62908|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3##BC028629|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3##NM_000808|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3##BC004105|MAGEA10|4109|melanoma antigen family A, 10##AK314161|MAGEA10|4109|melanoma antigen family A, 10##NM_001011543|MAGEA10|4109|melanoma antigen family A, 10##NM_001204811|MAGEA10-MAGEA5|100533997|MAGEA10-MAGEA5 readthrough##NM_001251828|MAGEA10|4109|melanoma antigen family A, 10##NM_021048|MAGEA10|4109|melanoma antigen family A, 10##NM_005363|MAGEA6|4105|melanoma antigen family A, 6##NM_175868|MAGEA6|4105|melanoma antigen family A, 6##AK289437|MAGEA6|4105|melanoma antigen family A, 6##BC067731|MAGEA6|4105|melanoma antigen family A, 6##BC041599|MAGEA6|4105|melanoma antigen family A, 6##BC109188|MAGEA2|4101|melanoma antigen family A, 2##BX640600|MAGEA6|4105|melanoma antigen family A, 6##NM_001129826|CSAG3|389903|CSAG family, member 3##BC119734|CSAG3|389903|CSAG family, member 3##BC119735|CSAG3|389903|CSAG family, member 3##AF080246|CSAG3|389903|CSAG family, member 3##AF136715|CSAG3|389903|CSAG family, member 3##NM_001080848|CSAG2|728461|CSAG family, member 2##NM_001129828|CSAG3|389903|CSAG family, member 3##NM_004909|CSAG2|728461|CSAG family, member 2##AK290443|MAGEA2|4101|melanoma antigen family A, 2##BC108720|MAGEA2|4101|melanoma antigen family A, 2##NM_005361|MAGEA2|4101|melanoma antigen family A, 2##NM_175742|MAGEA2|4101|melanoma antigen family A, 2##NM_175743|MAGEA2|4101|melanoma antigen family A, 2	0.98283	CTCF.p2:-18:0.983
chr6	52704528	52704627	reg1020901.p1	6.192	+	BC053578 BC110891 M15872 TSC_hg19_v1_chr6_-_52668615 AK293371 M14777 M21758 M25627 NM_145740 AK310324	-35896	-	AK292602 AK313601 M16594 BC002895 NM_000846	-76261	-	TSC_hg19_v1_chr6_+_52535913 NM_014051 AF239771 AK312063 BC015097 BC019328	-168654	+	NM_153699	6315	-	AF020919 BC020619 NM_000847	69900	-	AK315369 TSC_hg19_v1_chr6_-_52860078 AF020918 AF025887 BC096817 NM_001512	155550	-	BC053578|GSTA1|2938|glutathione S-transferase alpha 1##BC110891|GSTA1|2938|glutathione S-transferase alpha 1##M15872|GSTA1|2938|glutathione S-transferase alpha 1##AK293371|GSTA1|2938|glutathione S-transferase alpha 1##M14777|GSTA1|2938|glutathione S-transferase alpha 1##M21758|GSTA1|2938|glutathione S-transferase alpha 1##M25627|GSTA1|2938|glutathione S-transferase alpha 1##NM_145740|GSTA1|2938|glutathione S-transferase alpha 1##AK310324|GSTA1|2938|glutathione S-transferase alpha 1##AK292602|GSTA2|2939|glutathione S-transferase alpha 2##AK313601|GSTA2|2939|glutathione S-transferase alpha 2##M16594|GSTA2|2939|glutathione S-transferase alpha 2##BC002895|GSTA2|2939|glutathione S-transferase alpha 2##NM_000846|GSTA2|2939|glutathione S-transferase alpha 2##NM_014051|TMEM14A|28978|transmembrane protein 14A##AF239771|TMEM14A|28978|transmembrane protein 14A##AK312063|TMEM14A|28978|transmembrane protein 14A##BC015097|TMEM14A|28978|transmembrane protein 14A##BC019328|TMEM14A|28978|transmembrane protein 14A##NM_153699|GSTA5|221357|glutathione S-transferase alpha 5##AF020919|GSTA3|2940|glutathione S-transferase alpha 3##BC020619|GSTA3|2940|glutathione S-transferase alpha 3##NM_000847|GSTA3|2940|glutathione S-transferase alpha 3##AK315369|GSTA4|2941|glutathione S-transferase alpha 4##AF020918|GSTA4|2941|glutathione S-transferase alpha 4##AF025887|GSTA4|2941|glutathione S-transferase alpha 4##BC096817|GSTA4|2941|glutathione S-transferase alpha 4##NM_001512|GSTA4|2941|glutathione S-transferase alpha 4	0.981327	CTCF.p2:-20:0.981
chr1	183559603	183559783	reg1025124.p1	6.191	+	BT007439 AB590135 DQ893650 DQ895812 CU674784 AF527950 TSC_hg19_v1_chr1_-_183559595 AK296672 AK312666 AK298713	-135	-	TSC_hg19_v1_chr1_+_183441650 D87437 AB085674	-118023	+	AK297207 TSC_hg19_v1_chr1_+_183441641 AK299178 AK056035 AK091477 AX747010 BC036381 AK307394 AK074297	-118063	+	TSC_hg19_v1_chr1_-_183559669 BC001606 NM_000433 NM_001190789 NM_001190794	20	-	M32011 TSC_hg19_v1_chr1_-_183560049 NM_001127651	339	-	AB528796 TSC_hg19_v1_chr1_-_183604811 AF017807 CU691198 AF006088	45115	-	BT007439|NCF2|4688|neutrophil cytosolic factor 2##DQ893650|NCF2|4688|neutrophil cytosolic factor 2##DQ895812|NCF2|4688|neutrophil cytosolic factor 2##AF527950|NCF2|4688|neutrophil cytosolic factor 2##AK296672|NCF2|4688|neutrophil cytosolic factor 2##AK312666|NCF2|4688|neutrophil cytosolic factor 2##AK298713|NCF2|4688|neutrophil cytosolic factor 2##D87437|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AB085674|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK297207|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK299178|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK056035|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK091477|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC036381|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK307394|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK074297|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC001606|NCF2|4688|neutrophil cytosolic factor 2##NM_000433|NCF2|4688|neutrophil cytosolic factor 2##NM_001190789|NCF2|4688|neutrophil cytosolic factor 2##NM_001190794|NCF2|4688|neutrophil cytosolic factor 2##M32011|NCF2|4688|neutrophil cytosolic factor 2##NM_001127651|NCF2|4688|neutrophil cytosolic factor 2##AF017807|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##AF006088|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa	0.0293	
chr1	25161570	25161674	reg1019719.p1	6.191	+	TSC_hg19_v1_chr1_+_25071976 AF109196 AB463494 AM393644 CU680328 CR533501	-89617	+	TSC_hg19_v1_chr1_+_25071937 AK315051 AK301466 AK307142	-89689	+	NM_013943 TSC_hg19_v1_chr1_+_25071875 AL117424 AK001624 AK095959 BC012444 AF097330	-89791	+	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	94803	-	TSC_hg19_v1_chr1_-_25256761 AK301044	95117	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	95164	-	AF109196|CLIC4|25932|chloride intracellular channel 4##AM393644|CLIC4|25932|chloride intracellular channel 4##CR533501|CLIC4|25932|chloride intracellular channel 4##AK315051|CLIC4|25932|chloride intracellular channel 4##AK301466|CLIC4|25932|chloride intracellular channel 4##AK307142|CLIC4|25932|chloride intracellular channel 4##NM_013943|CLIC4|25932|chloride intracellular channel 4##AL117424|CLIC4|25932|chloride intracellular channel 4##AK001624|CLIC4|25932|chloride intracellular channel 4##AK095959|CLIC4|25932|chloride intracellular channel 4##BC012444|CLIC4|25932|chloride intracellular channel 4##AF097330|CLIC4|25932|chloride intracellular channel 4##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3	0.999607	CTCF.p2:-15:1.000
chr15	33601816	33601911	reg1018657.p1	6.191	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-241628	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-590697	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-591606	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	1306	+	TSC_hg19_v1_chr15_-_34212524 BC037796	610695	-	AK095198 NM_012125	659225	+	NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5	0.933028	CTCF.p2:1:0.933
chr19	19296863	19296974	reg1025280.p1	6.191	+	TSC_hg19_v1_chr19_-_19281094 NM_001145785	-15825	-	TSC_hg19_v1_chr19_-_19281067 AK057210	-15851	-	TSC_hg19_v1_chr19_-_19249268 BC005210 AK096964	-47643	-	TSC_hg19_v1_chr19_-_19302962 X68502 EU831418 EU831443 EU831511 EU831535 X63380 BC064537 BC000489 BC004449 BC010178 BC010931 AK301086 AK316328 BC157868 BC171869	6046	-	NM_003721 NM_134440 BC114558 BC114563 AF094760	6133	+	BC157837 BC171829 BC073957 NM_001145783 NM_001145784 NM_005919	6392	-	NM_001145785|MEF2B|100271849|myocyte enhancer factor 2B##AK057210|MEF2B|100271849|myocyte enhancer factor 2B##BC005210|TMEM161A|54929|transmembrane protein 161A##AK096964|TMEM161A|54929|transmembrane protein 161A##X68502|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##EU831418|MEF2BNB|729991|MEF2B neighbor##EU831443|MEF2BNB|729991|MEF2B neighbor##EU831511|MEF2BNB|729991|MEF2B neighbor##EU831535|MEF2BNB|729991|MEF2B neighbor##X63380|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##BC064537|MEF2BNB|729991|MEF2B neighbor##BC000489|MEF2BNB|729991|MEF2B neighbor##BC004449|MEF2BNB|729991|MEF2B neighbor##BC010178|MEF2BNB|729991|MEF2B neighbor##BC010931|MEF2BNB|729991|MEF2B neighbor##AK301086|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##AK316328|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##BC157868|MEF2BNB|729991|MEF2B neighbor##BC171869|MEF2BNB|729991|MEF2B neighbor##NM_003721|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##NM_134440|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##BC114558|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##BC114563|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##AF094760|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##BC157837|MEF2BNB|729991|MEF2B neighbor##BC171829|MEF2BNB|729991|MEF2B neighbor##BC073957|MEF2BNB|729991|MEF2B neighbor##NM_001145783|MEF2BNB|729991|MEF2B neighbor##NM_001145784|MEF2BNB|729991|MEF2B neighbor##NM_005919|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough	1.091343	CTCF.p2:-5:0.976
chr1	151986248	151986368	reg1023688.p1	6.190	+	NM_002966	-19595	-	BC015973 AK291073 TSC_hg19_v1_chr1_-_151966307 D28387	-19990	-	M81457 TSC_hg19_v1_chr1_-_151966289 BC105786 M38591	-20021	-	D50374 TSC_hg19_v1_chr1_-_152009438	23114	-	TSC_hg19_v1_chr1_-_152009451 AK312184 BC014354	23142	-	X80201 TSC_hg19_v1_chr1_-_152009481 BC001410 D49355	23166	-	NM_002966|S100A10|6281|S100 calcium binding protein A10##BC015973|S100A10|6281|S100 calcium binding protein A10##AK291073|S100A10|6281|S100 calcium binding protein A10##D28387|S100A10|6281|S100 calcium binding protein A10##M81457|S100A10|6281|S100 calcium binding protein A10##BC105786|S100A10|6281|S100 calcium binding protein A10##M38591|S100A10|6281|S100 calcium binding protein A10##D50374|S100A11|6282|S100 calcium binding protein A11##AK312184|S100A11|6282|S100 calcium binding protein A11##BC014354|S100A11|6282|S100 calcium binding protein A11##X80201|S100A11|6282|S100 calcium binding protein A11##BC001410|S100A11|6282|S100 calcium binding protein A11##D49355|S100A11|6282|S100 calcium binding protein A11	0.943333	CTCF.p2:0:0.943
chr1	35686738	35686865	reg1023138.p1	6.190	+	NM_005066 TSC_hg19_v1_chr1_-_35658747 BC051192	-28056	-	BC027717 TSC_hg19_v1_chr1_-_35658734 BC000546 BC027708 X70944 AK307985	-28065	-	BC004534 TSC_hg19_v1_chr1_-_35658589	-28256	-	TSC_hg19_v1_chr1_+_35734567 AK308320 NM_005095	47761	+	TSC_hg19_v1_chr1_+_35734624 BC127113 BC127114 AB587559	47827	+	BX648067 TSC_hg19_v1_chr1_+_35851133	164316	+	NM_005066|SFPQ|6421|splicing factor proline/glutamine-rich##BC051192|SFPQ|6421|splicing factor proline/glutamine-rich##BC027717|SFPQ|6421|splicing factor proline/glutamine-rich##BC000546|SFPQ|6421|splicing factor proline/glutamine-rich##BC027708|SFPQ|6421|splicing factor proline/glutamine-rich##X70944|SFPQ|6421|splicing factor proline/glutamine-rich##AK307985|SFPQ|6421|splicing factor proline/glutamine-rich##BC004534|SFPQ|6421|splicing factor proline/glutamine-rich##AK308320|ZMYM4|9202|zinc finger, MYM-type 4##NM_005095|ZMYM4|9202|zinc finger, MYM-type 4##BC127113|ZMYM4|9202|zinc finger, MYM-type 4##BC127114|ZMYM4|9202|zinc finger, MYM-type 4##BX648067|ZMYM4|9202|zinc finger, MYM-type 4	0.0	
chr4	84430358	84430481	reg1022838.p2	6.190	+	BC016905 TSC_hg19_v1_chr4_-_84406254 EF531340 BC039573 AY358576 AK022704 AK023676 NM_139076	-24145	-	AK026620 NM_016067 AF151892 BC005186 TSC_hg19_v1_chr4_+_84377213 AK002008 CU675033	-53246	+	BC095473 BC011863 BC065814 BC111502 TSC_hg19_v1_chr4_-_84376999 AK308395 AF436845 AK312725 AK128665 BC015428 NM_133636	-53436	-	TSC_hg19_v1_chr4_+_84457260 AK055749 AK223543	26853	+	TSC_hg19_v1_chr4_+_84457420 DQ345298 BC090956 AY358100 NM_032717 DQ324782	27162	+	NM_006168	988967	-	BC016905|FAM175A|84142|family with sequence similarity 175, member A##EF531340|FAM175A|84142|family with sequence similarity 175, member A##BC039573|FAM175A|84142|family with sequence similarity 175, member A##AY358576|FAM175A|84142|family with sequence similarity 175, member A##AK022704|FAM175A|84142|family with sequence similarity 175, member A##AK023676|FAM175A|84142|family with sequence similarity 175, member A##NM_139076|FAM175A|84142|family with sequence similarity 175, member A##AK026620|MRPS18C|51023|mitochondrial ribosomal protein S18C##NM_016067|MRPS18C|51023|mitochondrial ribosomal protein S18C##AF151892|MRPS18C|51023|mitochondrial ribosomal protein S18C##BC005186|MRPS18C|51023|mitochondrial ribosomal protein S18C##AK002008|MRPS18C|51023|mitochondrial ribosomal protein S18C##BC095473|HELQ|113510|helicase, POLQ-like##BC011863|HELQ|113510|helicase, POLQ-like##BC065814|HELQ|113510|helicase, POLQ-like##BC111502|HELQ|113510|helicase, POLQ-like##AK308395|HELQ|113510|helicase, POLQ-like##AF436845|HELQ|113510|helicase, POLQ-like##AK312725|HELQ|113510|helicase, POLQ-like##AK128665|HELQ|113510|helicase, POLQ-like##BC015428|HELQ|113510|helicase, POLQ-like##NM_133636|HELQ|113510|helicase, POLQ-like##AK055749|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK223543|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_006168|NKX6-1|4825|NK6 homeobox 1	0.959405	CTCF.p2:-18:0.959
chr7	95319950	95320101	reg1013351.p2	6.190	+	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	-94162	-	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-204732	+	TSC_hg19_v1_chr7_-_95064341 AB102891 CU692318 AB591009 L48513 BC040010 AF001602 AF001601 BC073739 AK296029 BC093006 BC046160 AK291103 AK308065 AK315209 AK296636 BC009728 NM_000305 NM_001018161 AK301313	-255664	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	81883	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	631377	-	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	812802	-	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##AB102891|PON2|5445|paraoxonase 2##L48513|PON2|5445|paraoxonase 2##BC040010|PON2|5445|paraoxonase 2##AF001602|PON2|5445|paraoxonase 2##AF001601|PON2|5445|paraoxonase 2##AK296029|PON2|5445|paraoxonase 2##BC093006|PON2|5445|paraoxonase 2##BC046160|PON2|5445|paraoxonase 2##AK291103|PON2|5445|paraoxonase 2##AK308065|PON2|5445|paraoxonase 2##AK315209|PON2|5445|paraoxonase 2##AK296636|PON2|5445|paraoxonase 2##BC009728|PON2|5445|paraoxonase 2##NM_000305|PON2|5445|paraoxonase 2##NM_001018161|PON2|5445|paraoxonase 2##AK301313|PON2|5445|paraoxonase 2##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280	0.597617	CTCF.p2:26:0.598
chr1	102639912	102640067	reg1026010.p1	6.189	+	NM_058170 TSC_hg19_v1_chr1_-_102462791	-177199	-	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	-177502	-	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-937419	+	AB208844 TSC_hg19_v1_chr1_-_103496798	856794	-	J04177 TSC_hg19_v1_chr1_-_103574032 BC117697	933982	-	NM_001190709 NM_001854 NM_080629 NM_080630 TSC_hg19_v1_chr1_-_103574051	934062	-	NM_058170|OLFM3|118427|olfactomedin 3##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##AB208844|COL11A1|1301|collagen, type XI, alpha 1##J04177|COL11A1|1301|collagen, type XI, alpha 1##BC117697|COL11A1|1301|collagen, type XI, alpha 1##NM_001190709|COL11A1|1301|collagen, type XI, alpha 1##NM_001854|COL11A1|1301|collagen, type XI, alpha 1##NM_080629|COL11A1|1301|collagen, type XI, alpha 1##NM_080630|COL11A1|1301|collagen, type XI, alpha 1	0.0	
chr16	82095603	82095719	reg1020988.p1	6.189	+	TSC_hg19_v1_chr16_+_82068989 DQ893100 DQ896372	-26668	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	-26729	+	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	-26800	+	CU689076 AB463897 TSC_hg19_v1_chr16_-_82203821 BC005242 BC031017 BC011020 BC029395 X98263 AK222667 AK314163 NM_005792	108149	-	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	564733	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	564928	+	DQ893100|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##DQ896372|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC005242|MPHOSPH6|10200|M-phase phosphoprotein 6##BC031017|MPHOSPH6|10200|M-phase phosphoprotein 6##BC011020|MPHOSPH6|10200|M-phase phosphoprotein 6##BC029395|MPHOSPH6|10200|M-phase phosphoprotein 6##X98263|MPHOSPH6|10200|M-phase phosphoprotein 6##AK222667|MPHOSPH6|10200|M-phase phosphoprotein 6##AK314163|MPHOSPH6|10200|M-phase phosphoprotein 6##NM_005792|MPHOSPH6|10200|M-phase phosphoprotein 6##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)	0.979215	CTCF.p2:22:0.979
chr1	201088502	201088596	reg1022336.p1	6.188	+	L33798 NM_000069	-6856	-	TSC_hg19_v1_chr1_+_200993085 AK022893 BC037533 BC016656	-95462	+	TSC_hg19_v1_chr1_-_200992826 AB007918 NM_001252100 NM_001252102 NM_001252103 NM_017596	-95718	-	TSC_hg19_v1_chr1_-_201123569 AK091726	35022	-	AK075335 AY138587 AK296307 TSC_hg19_v1_chr1_-_201123603 BC001106 AL136600 AK054883 AK303843 NM_016456	35063	-	BC033185 NM_001164586	71403	+	L33798|CACNA1S|779|calcium channel, voltage-dependent, L type, alpha 1S subunit##NM_000069|CACNA1S|779|calcium channel, voltage-dependent, L type, alpha 1S subunit##AB007918|KIF21B|23046|kinesin family member 21B##NM_001252100|KIF21B|23046|kinesin family member 21B##NM_001252102|KIF21B|23046|kinesin family member 21B##NM_001252103|KIF21B|23046|kinesin family member 21B##NM_017596|KIF21B|23046|kinesin family member 21B##AK091726|TMEM9|252839|transmembrane protein 9##AK075335|TMEM9|252839|transmembrane protein 9##AY138587|TMEM9|252839|transmembrane protein 9##AK296307|TMEM9|252839|transmembrane protein 9##BC001106|TMEM9|252839|transmembrane protein 9##AL136600|TMEM9|252839|transmembrane protein 9##AK054883|TMEM9|252839|transmembrane protein 9##AK303843|TMEM9|252839|transmembrane protein 9##NM_016456|TMEM9|252839|transmembrane protein 9##BC033185|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##NM_001164586|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1	0.0	
chr5	180217107	180217222	reg1018965.p1	6.188	+	NM_001001657 BC140756	-50087	-	TSC_hg19_v1_chr5_-_180076616 NM_002020 NM_182925	-140540	-	AK291679 AK309910 TSC_hg19_v1_chr5_-_180076601	-140562	-	M55621 TSC_hg19_v1_chr5_-_180229805 AK075429 AK090523	12600	-	NM_002406	12883	-	TSC_hg19_v1_chr5_-_180230897 NM_001114619 NM_001114620 AK290769	13748	-	NM_001001657|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1##BC140756|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1##NM_002020|FLT4|2324|fms-related tyrosine kinase 4##NM_182925|FLT4|2324|fms-related tyrosine kinase 4##AK291679|FLT4|2324|fms-related tyrosine kinase 4##AK309910|FLT4|2324|fms-related tyrosine kinase 4##M55621|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK075429|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK090523|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_002406|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_001114619|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_001114620|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK290769|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	1.916853	CTCF.p2:0:1.000	CTCF.p2:86:0.917
chr6	46459623	46459773	reg1025581.p1	6.188	+	TSC_hg19_v1_chr6_-_46459031 AY034086 AK090990 AX746721 NM_001251974	-664	-	NM_005822	-166070	-	D83407 TSC_hg19_v1_chr6_-_46293410 BC038509	-166291	-	AY034085 NM_001251973	58	-	AK307986 CU679677 DQ892889 EU176719 AF237982 AK301604 BC034323 BC012548 AK292263 BC010358 NM_016593	160677	-	TSC_hg19_v1_chr6_+_46620711 NM_001204051 NM_001204052 NM_004277 AK295233 BC033091 AK302906 AK291427 AK315940 AY358711 AF110532 CU689606	161082	+	AY034086|RCAN2|10231|regulator of calcineurin 2##AK090990|RCAN2|10231|regulator of calcineurin 2##NM_001251974|RCAN2|10231|regulator of calcineurin 2##NM_005822|RCAN2|10231|regulator of calcineurin 2##D83407|RCAN2|10231|regulator of calcineurin 2##BC038509|RCAN2|10231|regulator of calcineurin 2##AY034085|RCAN2|10231|regulator of calcineurin 2##NM_001251973|RCAN2|10231|regulator of calcineurin 2##AK307986|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##DQ892889|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##EU176719|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##AF237982|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##AK301604|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##BC034323|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##BC012548|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##AK292263|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##BC010358|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##NM_016593|CYP39A1|51302|cytochrome P450, family 39, subfamily A, polypeptide 1##NM_001204051|SLC25A27|9481|solute carrier family 25, member 27##NM_001204052|SLC25A27|9481|solute carrier family 25, member 27##NM_004277|SLC25A27|9481|solute carrier family 25, member 27##AK295233|SLC25A27|9481|solute carrier family 25, member 27##BC033091|SLC25A27|9481|solute carrier family 25, member 27##AK302906|SLC25A27|9481|solute carrier family 25, member 27##AK291427|SLC25A27|9481|solute carrier family 25, member 27##AK315940|SLC25A27|9481|solute carrier family 25, member 27##AY358711|SLC25A27|9481|solute carrier family 25, member 27##AF110532|SLC25A27|9481|solute carrier family 25, member 27	0.088313	
chrX	40331728	40331860	reg1024751.p2	6.188	+	BC114220 NM_001123383 NM_001123384	-295213	-	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	-375102	-	TSC_hg19_v1_chrX_+_38663536 AK001248	-1668254	+	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	108392	+	AF291814 TSC_hg19_v1_chrX_+_40440231 AK293510 BC084541 AK297007 AF109363	108448	+	TSC_hg19_v1_chrX_+_40440264 AK314633 AK315948	108478	+	BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF291814|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK293510|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##BC084541|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK297007|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF109363|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK314633|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK315948|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.868851	CTCF.p2:33:0.723
chr11	94234850	94234957	reg1023305.p2	6.187	+	TSC_hg19_v1_chr11_+_94227168 NM_017704 AF025354 AK000196 BC017798 AK000448 AL833977	-7745	+	U37359 TSC_hg19_v1_chr11_-_94227011 BC017823 BC005241 AK095388 AF022778 AK308318 NM_005590 NM_005591	-7930	-	TSC_hg19_v1_chr11_-_94134589 AK315161 NM_016540	-100321	-	NM_001190462	10791	+	AK293616 NM_002033 TSC_hg19_v1_chr11_+_94277086 M58597 BC136373 BC136374	42176	+	TSC_hg19_v1_chr11_+_94277605 M58596	42696	+	NM_017704|ANKRD49|54851|ankyrin repeat domain 49##AF025354|ANKRD49|54851|ankyrin repeat domain 49##AK000196|ANKRD49|54851|ankyrin repeat domain 49##BC017798|ANKRD49|54851|ankyrin repeat domain 49##AK000448|ANKRD49|54851|ankyrin repeat domain 49##AL833977|ANKRD49|54851|ankyrin repeat domain 49##U37359|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC017823|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC005241|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK095388|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AF022778|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK308318|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005590|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005591|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK315161|GPR83|10888|G protein-coupled receptor 83##NM_016540|GPR83|10888|G protein-coupled receptor 83##NM_001190462|LOC643037|643037|uncharacterized LOC643037##AK293616|PIWIL4|143689|piwi-like 4 (Drosophila)##NM_002033|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58597|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136373|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136374|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)	0.30252	CTCF.p2:5:0.303
chr12	54788145	54788272	reg1025903.p1	6.187	+	TSC_hg19_v1_chr12_-_54785083 AK024404 BC029752 AK315613 NM_001130967 NM_001130968	-3120	-	AB593085 TSC_hg19_v1_chr12_-_54779552 AK092724 AY461717	-8674	-	AK296564 TSC_hg19_v1_chr12_-_54778485 AF304052 NM_015481	-9734	-	M13918 TSC_hg19_v1_chr12_-_54813000 CU679109 DQ892690 EU176722 AB385038 AK291570 AK311051	24760	-	TSC_hg19_v1_chr12_-_54813005 AK304696 X06256	24796	-	TSC_hg19_v1_chr12_-_54813025 BC008786 AK312414 NM_002205	24827	-	AK024404|ZNF385A|25946|zinc finger protein 385A##BC029752|ZNF385A|25946|zinc finger protein 385A##AK315613|ZNF385A|25946|zinc finger protein 385A##NM_001130967|ZNF385A|25946|zinc finger protein 385A##NM_001130968|ZNF385A|25946|zinc finger protein 385A##AB593085|ZNF385A|25946|zinc finger protein 385A##AK092724|ZNF385A|25946|zinc finger protein 385A##AY461717|ZNF385A|25946|zinc finger protein 385A##AK296564|ZNF385A|25946|zinc finger protein 385A##AF304052|ZNF385A|25946|zinc finger protein 385A##NM_015481|ZNF385A|25946|zinc finger protein 385A##M13918|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##DQ892690|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##EU176722|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK291570|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK311051|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK304696|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##X06256|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##BC008786|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK312414|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##NM_002205|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)	0.999865	CTCF.p2:5:1.000
chr1	146395332	146395490	reg1023303.p1	6.186	+	BC136292 NM_183372 AL832622	-312713	-	AF419617 NM_001101663	-327167	-	NM_001097616	-511544	+	AJ224538 HQ257946 TSC_hg19_v1_chr1_-_146643798	248354	-	AK316005 AK292820 AK304069 AK310982 BC053610 NM_005399 AK294863 AK316183	248681	-	AK295985 TSC_hg19_v1_chr1_+_146649617	254169	+	BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##AF419617|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_001101663|NBPF24|728912|neuroblastoma breakpoint family, member 24##NM_001097616|GPR89C|728932|G protein-coupled receptor 89C##AJ224538|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##HQ257946|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316005|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK292820|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK304069|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK310982|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##BC053610|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##NM_005399|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK294863|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316183|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	0.389166	CTCF.p2:10:0.389
chr3	184445383	184445496	reg1020942.p2	6.186	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	-15676	-	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	-165857	+	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	-347399	+	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	84484	+	TSC_hg19_v1_chr3_+_184529983 BC140768	84556	+	TSC_hg19_v1_chr3_-_184870632 BC137178 BC137179 BC150565	425214	-	AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3##AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BC140768|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BC137178|C3orf70|285382|chromosome 3 open reading frame 70##BC137179|C3orf70|285382|chromosome 3 open reading frame 70##BC150565|C3orf70|285382|chromosome 3 open reading frame 70	0.994653	CTCF.p2:-1:0.995
chr1	212631233	212631369	reg1021733.p1	6.185	+	TSC_hg19_v1_chr1_+_212606264 AF173937 NM_013349 AK074431 AK223135 AY762102 BC008823 AB126219 AF049672	-24989	+	TSC_hg19_v1_chr1_-_212588248 AK297200 NM_001198862 AK024066 NM_018252	-43049	-	TSC_hg19_v1_chr1_-_212588235 AK001736	-43066	-	NM_001030287	107374	+	NM_001040619 NM_001206484 NM_001206488 NM_001674 TSC_hg19_v1_chr1_+_212782102 AK294296	150734	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	150806	+	AF173937|NENF|29937|neudesin neurotrophic factor##NM_013349|NENF|29937|neudesin neurotrophic factor##AK074431|NENF|29937|neudesin neurotrophic factor##AK223135|NENF|29937|neudesin neurotrophic factor##AY762102|NENF|29937|neudesin neurotrophic factor##BC008823|NENF|29937|neudesin neurotrophic factor##AB126219|NENF|29937|neudesin neurotrophic factor##AF049672|NENF|29937|neudesin neurotrophic factor##AK297200|TMEM206|55248|transmembrane protein 206##NM_001198862|TMEM206|55248|transmembrane protein 206##AK024066|TMEM206|55248|transmembrane protein 206##NM_018252|TMEM206|55248|transmembrane protein 206##AK001736|TMEM206|55248|transmembrane protein 206##NM_001030287|ATF3|467|activating transcription factor 3##NM_001040619|ATF3|467|activating transcription factor 3##NM_001206484|ATF3|467|activating transcription factor 3##NM_001206488|ATF3|467|activating transcription factor 3##NM_001674|ATF3|467|activating transcription factor 3##AK294296|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3	0.993881	CTCF.p2:-12:0.994
chr3	47206252	47206388	reg1022408.p1	6.184	+	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	-881	-	TSC_hg19_v1_chr3_-_47098906 AK026837	-107377	-	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	-176850	+	BC015311 NM_001134878 NM_022342 NM_182902	117975	-	NM_025010 TSC_hg19_v1_chr3_+_47324433 AK023765 AK291477 AK295292 BX537953 BC015962 AB527175 AM393269 AM393767 BC032620	118108	+	AB040904 NM_015466 TSC_hg19_v1_chr3_+_47422510 AK055157 AK299906 AK295888 AK289502 AB025194 AF290614 AK295877 BC089042	216212	+	AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2##AK026837|SETD2|29072|SET domain containing 2##AK092871|NBEAL2|23218|neurobeachin-like 2##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9##NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)##AK023765|KLHL18|23276|kelch-like 18 (Drosophila)##AK291477|KLHL18|23276|kelch-like 18 (Drosophila)##AK295292|KLHL18|23276|kelch-like 18 (Drosophila)##BX537953|KLHL18|23276|kelch-like 18 (Drosophila)##BC015962|KLHL18|23276|kelch-like 18 (Drosophila)##AM393269|KLHL18|23276|kelch-like 18 (Drosophila)##AM393767|KLHL18|23276|kelch-like 18 (Drosophila)##BC032620|KLHL18|23276|kelch-like 18 (Drosophila)##AB040904|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_015466|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK055157|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK299906|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295888|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK289502|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AB025194|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AF290614|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295877|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##BC089042|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23	0.0	
chr7	149504401	149504490	reg1023679.p2	6.184	+	NM_198455	-31315	+	BC052625 NM_207336 BC038972	-34145	-	TSC_hg19_v1_chr7_+_149412043 BC142722 BC146667 AB058765 BC150330 BC152409 NM_032534	-92358	+	BC092506 TSC_hg19_v1_chr7_+_149535500 AK054924	31045	+	BC045757 NM_001099220 TSC_hg19_v1_chr7_+_149535531	31076	+	TSC_hg19_v1_chr7_+_149570049 AF452639 AK057700 NM_001100592 NM_145230	65597	+	NM_198455|SSPO|23145|SCO-spondin homolog (Bos taurus)##BC052625|ZNF467|168544|zinc finger protein 467##NM_207336|ZNF467|168544|zinc finger protein 467##BC038972|ZNF467|168544|zinc finger protein 467##BC142722|KRBA1|84626|KRAB-A domain containing 1##BC146667|KRBA1|84626|KRAB-A domain containing 1##AB058765|KRBA1|84626|KRAB-A domain containing 1##BC150330|KRBA1|84626|KRAB-A domain containing 1##BC152409|KRBA1|84626|KRAB-A domain containing 1##NM_032534|KRBA1|84626|KRAB-A domain containing 1##BC092506|ZNF862|643641|zinc finger protein 862##AK054924|ZNF862|643641|zinc finger protein 862##BC045757|ZNF862|643641|zinc finger protein 862##NM_001099220|ZNF862|643641|zinc finger protein 862##AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2	0.995452	CTCF.p2:10:0.995
chr14	104259736	104259824	reg1022261.p1	6.183	+	TSC_hg19_v1_chr14_+_104182144 NM_001198953 NM_024071 BC005999 AK057816 BC001130 AY395756 AK290519 BX248261	-77664	+	TSC_hg19_v1_chr14_-_104181759 AK022829 BC011725 BX161398 BC001036 AK023646 NM_001100118 NM_001100119 NM_005432	-77997	-	AK124498 TSC_hg19_v1_chr14_-_104178577	-81272	-	BC136527 AJ318887 TSC_hg19_v1_chr14_-_104313913 BC035446 NM_015316	54072	-	BX161388 TSC_hg19_v1_chr14_-_104387847 BC047289 BC063419 BC000429 BC001944	128065	-	AK310120 TSC_hg19_v1_chr14_-_104387867 AK309355 AK312099 AF054175 AK309499 DQ426862 NM_001127393 NM_004894	128099	-	NM_001198953|ZFYVE21|79038|zinc finger, FYVE domain containing 21##NM_024071|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BC005999|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK057816|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BC001130|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AY395756|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK290519|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BX248261|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK022829|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC011725|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BX161398|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC001036|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK023646|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100118|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100119|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_005432|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK124498|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC136527|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##AJ318887|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##BC035446|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##NM_015316|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##BX161388|C14orf2|9556|chromosome 14 open reading frame 2##BC047289|C14orf2|9556|chromosome 14 open reading frame 2##BC063419|C14orf2|9556|chromosome 14 open reading frame 2##BC000429|C14orf2|9556|chromosome 14 open reading frame 2##BC001944|C14orf2|9556|chromosome 14 open reading frame 2##AK310120|C14orf2|9556|chromosome 14 open reading frame 2##AK309355|C14orf2|9556|chromosome 14 open reading frame 2##AK312099|C14orf2|9556|chromosome 14 open reading frame 2##AF054175|C14orf2|9556|chromosome 14 open reading frame 2##AK309499|C14orf2|9556|chromosome 14 open reading frame 2##DQ426862|C14orf2|9556|chromosome 14 open reading frame 2##NM_001127393|C14orf2|9556|chromosome 14 open reading frame 2##NM_004894|C14orf2|9556|chromosome 14 open reading frame 2	0.986537	CTCF.p2:0:0.987
chr2	233230385	233230495	reg1022493.p2	6.183	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-404080	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	-439407	-	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-579324	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	12943	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	41136	+	AK313163 NM_001631 BC132678 M31008 M15694	90430	+	AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal	0.216386	CTCF.p2:20:0.216
chr2	95897518	95897639	reg1023900.p1	6.183	+	AK295739 TSC_hg19_v1_chr2_+_95831557 AK315762 AK290798 AK315829 AK299058 X60154	-66026	+	X60152 AK055072 NM_001017396 NM_021088 BC005068 CR749650	-66385	+	BC068498 TSC_hg19_v1_chr2_-_95825526	-72062	-	TSC_hg19_v1_chr2_+_95940195 AF245303 AF245304 NM_001165977 NM_001165978 NM_144707	42619	+	BC113877 BC114525 AK091175 AX746828 TSC_hg19_v1_chr2_+_95940239 AK290366 AK313267 AY358377 BC025736	42656	+	TSC_hg19_v1_chr2_+_95963054 NM_013434 AB209076 AJ131730 AK095539 AK315437 BC012850 AF120102 AB528387 AF199599 AF367022 BT020075 CU680412 DQ148485 DQ892078 DQ895271 DQ895316	65528	+	AK295739|ZNF2|7549|zinc finger protein 2##AK315762|ZNF2|7549|zinc finger protein 2##AK290798|ZNF2|7549|zinc finger protein 2##AK315829|ZNF2|7549|zinc finger protein 2##AK299058|ZNF2|7549|zinc finger protein 2##X60154|ZNF2|7549|zinc finger protein 2##X60152|ZNF2|7549|zinc finger protein 2##AK055072|ZNF2|7549|zinc finger protein 2##NM_001017396|ZNF2|7549|zinc finger protein 2##NM_021088|ZNF2|7549|zinc finger protein 2##BC005068|ZNF2|7549|zinc finger protein 2##CR749650|ZNF2|7549|zinc finger protein 2##BC068498|ZNF514|84874|zinc finger protein 514##AF245303|PROM2|150696|prominin 2##AF245304|PROM2|150696|prominin 2##NM_001165977|PROM2|150696|prominin 2##NM_001165978|PROM2|150696|prominin 2##NM_144707|PROM2|150696|prominin 2##BC113877|PROM2|150696|prominin 2##BC114525|PROM2|150696|prominin 2##AK091175|PROM2|150696|prominin 2##AK290366|PROM2|150696|prominin 2##AK313267|PROM2|150696|prominin 2##AY358377|PROM2|150696|prominin 2##BC025736|PROM2|150696|prominin 2##NM_013434|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AJ131730|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK095539|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK315437|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC012850|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF120102|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF199599|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF367022|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BT020075|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ148485|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ892078|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895271|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895316|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	0.872234	CTCF.p2:-11:0.872
chr7	123220993	123221142	reg1021041.p1	6.183	+	CR933664 BT006695 TSC_hg19_v1_chr7_-_123197862 AK022209 BC020821 BC070236 BC070237 U64028 AK315458 U53468 BC000813 NM_005000	-23177	-	BC091520 BC128181 BC128182 AK093153 AX747958 BC032838 BC068607 NM_178827	-46423	-	AB528233 AK026413 AK314537 AF260824 BC111775 NM_022444	-381056	-	AF428257 BC100874 BC100875 BC100876 BC100877 NM_080928	28026	+	NM_207163 AK299434 AK299389 AK300698 AK309449 BC017911 BC062765 AK309496 AB591033	74870	+	TSC_hg19_v1_chr7_-_123389069 AM295156 CU690940 AB587496 BC013776 AK289795 D88460 CR749438 BC028602 BC052955 NM_003941	167907	-	CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC091520|IQUB|154865|IQ motif and ubiquitin domain containing##BC128181|IQUB|154865|IQ motif and ubiquitin domain containing##BC128182|IQUB|154865|IQ motif and ubiquitin domain containing##AK093153|IQUB|154865|IQ motif and ubiquitin domain containing##BC032838|IQUB|154865|IQ motif and ubiquitin domain containing##BC068607|IQUB|154865|IQ motif and ubiquitin domain containing##NM_178827|IQUB|154865|IQ motif and ubiquitin domain containing##AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15##NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15##NM_207163|LMOD2|442721|leiomodin 2 (cardiac)##AK299434|LMOD2|442721|leiomodin 2 (cardiac)##AK299389|LMOD2|442721|leiomodin 2 (cardiac)##AK300698|LMOD2|442721|leiomodin 2 (cardiac)##BC017911|LMOD2|442721|leiomodin 2 (cardiac)##BC062765|LMOD2|442721|leiomodin 2 (cardiac)##AM295156|WASL|8976|Wiskott-Aldrich syndrome-like##BC013776|WASL|8976|Wiskott-Aldrich syndrome-like##AK289795|WASL|8976|Wiskott-Aldrich syndrome-like##D88460|WASL|8976|Wiskott-Aldrich syndrome-like##CR749438|WASL|8976|Wiskott-Aldrich syndrome-like##BC028602|WASL|8976|Wiskott-Aldrich syndrome-like##BC052955|WASL|8976|Wiskott-Aldrich syndrome-like##NM_003941|WASL|8976|Wiskott-Aldrich syndrome-like	0.969573	CTCF.p2:11:0.970
chr8	19637160	19637289	reg1022861.p2	6.183	+	AK314625 TSC_hg19_v1_chr8_-_19615422	-21807	-	AY358441 NM_018371	-97131	-	BX649103 NM_001130518	-177194	-	TSC_hg19_v1_chr8_+_19674936 NM_018142	37697	+	TSC_hg19_v1_chr8_+_19674972 AK001431 AB590485	37779	+	NM_000237 S78266 TSC_hg19_v1_chr8_+_19796721	159428	+	AK314625|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AY358441|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018371|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##BX649103|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_001130518|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018142|INTS10|55174|integrator complex subunit 10##AK001431|INTS10|55174|integrator complex subunit 10##NM_000237|LPL|4023|lipoprotein lipase##S78266|LPL|4023|lipoprotein lipase	0.973359	CTCF.p2:-3:0.973
chrX	117896214	117896356	reg1026529.p1	6.183	+	TSC_hg19_v1_chrX_+_117861562 BC015768 NM_001560 Y10659 U81379 U81380 AK313467 Y09328 BC009960 AB528371 DQ893454 DQ896296 AB209849	-34718	+	AY692226 NM_144658 TSC_hg19_v1_chrX_+_117629874	-266413	+	TSC_hg19_v1_chrX_+_117526665 AL834210	-369598	+	TSC_hg19_v1_chrX_+_117957786 AK122676 BC036572 BC031241 BC057841 NM_173798 BC018066	61537	+	TSC_hg19_v1_chrX_+_118108580 AK091777 AK290198 AX747177	212295	+	TSC_hg19_v1_chrX_+_118108607 BC098283 BC099847 BC100671 BC103491 NM_001031855 NM_024778	212368	+	BC015768|IL13RA1|3597|interleukin 13 receptor, alpha 1##NM_001560|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y10659|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81379|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81380|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK313467|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y09328|IL13RA1|3597|interleukin 13 receptor, alpha 1##BC009960|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ893454|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ896296|IL13RA1|3597|interleukin 13 receptor, alpha 1##AB209849|IL13RA1|3597|interleukin 13 receptor, alpha 1##AY692226|DOCK11|139818|dedicator of cytokinesis 11##NM_144658|DOCK11|139818|dedicator of cytokinesis 11##AL834210|WDR44|54521|WD repeat domain 44##AK122676|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC036572|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC031241|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC057841|ZCCHC12|170261|zinc finger, CCHC domain containing 12##NM_173798|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC018066|ZCCHC12|170261|zinc finger, CCHC domain containing 12##AK091777|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK290198|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC098283|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC099847|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC100671|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC103491|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_001031855|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_024778|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3	0.212394	CTCF.p2:-1:0.212
chr10	1188657	1188798	reg1024128.p1	6.182	+	TSC_hg19_v1_chr10_+_1102822 AK292591	-85901	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-85958	+	BC057827 TSC_hg19_v1_chr10_-_1102645	-86075	-	AF034837 NM_018702	590942	-	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	1921020	+	AK092597 AX747622 NM_001242339	1922091	+	AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC057827|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet	0.896414	CTCF.p2:8:0.896
chr2	62266583	62266721	reg1022071.p1	6.182	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-133823	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-150866	-	TSC_hg19_v1_chr2_-_62115733 BC106933 BC106934 AF026291	-150918	-	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	156614	+	BC047439 AK091902 AX747245 NM_198276	466887	-	AK292545 NM_001142615	634333	+	AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106933|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106934|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AF026291|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1	0.0	
chr1	62610036	62610181	reg1026852.p1	6.181	+	TSC_hg19_v1_chr1_+_62208151 AJ001306 AJ224747 AJ224748 NM_176877 AK307713 AK308428 BC142661 BC142723	-401958	+	AF353990 NM_032027	-419014	-	TSC_hg19_v1_chr1_-_62190806 BC048995 BC029486	-419289	-	NM_001164835 NM_019079 BC012555 BC060808 AB211065 AL834314 AK001973 BC111559	50408	+	AK091941 AX747268 TSC_hg19_v1_chr1_-_62785028	174891	-	TSC_hg19_v1_chr1_-_62785084 AB284127 BC060866 NM_181712	174971	-	AJ001306|INADL|10207|InaD-like (Drosophila)##AJ224747|INADL|10207|InaD-like (Drosophila)##AJ224748|INADL|10207|InaD-like (Drosophila)##NM_176877|INADL|10207|InaD-like (Drosophila)##AK307713|INADL|10207|InaD-like (Drosophila)##AK308428|INADL|10207|InaD-like (Drosophila)##BC142661|INADL|10207|InaD-like (Drosophila)##BC142723|INADL|10207|InaD-like (Drosophila)##AF353990|TM2D1|83941|TM2 domain containing 1##NM_032027|TM2D1|83941|TM2 domain containing 1##BC048995|TM2D1|83941|TM2 domain containing 1##BC029486|TM2D1|83941|TM2 domain containing 1##NM_001164835|L1TD1|54596|LINE-1 type transposase domain containing 1##NM_019079|L1TD1|54596|LINE-1 type transposase domain containing 1##BC012555|L1TD1|54596|LINE-1 type transposase domain containing 1##BC060808|L1TD1|54596|LINE-1 type transposase domain containing 1##AB211065|L1TD1|54596|LINE-1 type transposase domain containing 1##AL834314|L1TD1|54596|LINE-1 type transposase domain containing 1##AK001973|L1TD1|54596|LINE-1 type transposase domain containing 1##BC111559|L1TD1|54596|LINE-1 type transposase domain containing 1##AK091941|KANK4|163782|KN motif and ankyrin repeat domains 4##AB284127|KANK4|163782|KN motif and ankyrin repeat domains 4##BC060866|KANK4|163782|KN motif and ankyrin repeat domains 4##NM_181712|KANK4|163782|KN motif and ankyrin repeat domains 4	0.917294	CTCF.p2:-7:0.917
chr6	116418071	116418251	reg1013660.p1	6.181	+	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	-36279	-	AF503292 NM_153612 BC093911 BC093913	-2034137	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-2125825	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	3848	+	AK097758 TSC_hg19_v1_chr6_-_116422450	4269	-	BC130621 BC130623 NM_000493	29099	-	BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1##BC130621|COL10A1|1300|collagen, type X, alpha 1##BC130623|COL10A1|1300|collagen, type X, alpha 1##NM_000493|COL10A1|1300|collagen, type X, alpha 1	0.0	
chr1	233654198	233654361	reg1022740.p1	6.180	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	-190696	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	-222796	-	TSC_hg19_v1_chr1_+_233086381 AF416713	-567890	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	95544	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	95640	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	386333	+	AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3	0.997979	CTCF.p2:-12:0.998
chr2	155309574	155309708	reg1022267.p1	6.180	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-581197	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-974390	-	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-1734497	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	245548	+	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	1877049	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	1879522	-	NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	0.971115	CTCF.p2:-22:0.971
chr7	95317190	95317287	reg1022161.p1	6.180	+	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	-91375	-	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-201945	+	TSC_hg19_v1_chr7_-_95064341 AB102891 CU692318 AB591009 L48513 BC040010 AF001602 AF001601 BC073739 AK296029 BC093006 BC046160 AK291103 AK308065 AK315209 AK296636 BC009728 NM_000305 NM_001018161 AK301313	-252877	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	84670	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	634164	-	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	815589	-	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##AB102891|PON2|5445|paraoxonase 2##L48513|PON2|5445|paraoxonase 2##BC040010|PON2|5445|paraoxonase 2##AF001602|PON2|5445|paraoxonase 2##AF001601|PON2|5445|paraoxonase 2##AK296029|PON2|5445|paraoxonase 2##BC093006|PON2|5445|paraoxonase 2##BC046160|PON2|5445|paraoxonase 2##AK291103|PON2|5445|paraoxonase 2##AK308065|PON2|5445|paraoxonase 2##AK315209|PON2|5445|paraoxonase 2##AK296636|PON2|5445|paraoxonase 2##BC009728|PON2|5445|paraoxonase 2##NM_000305|PON2|5445|paraoxonase 2##NM_001018161|PON2|5445|paraoxonase 2##AK301313|PON2|5445|paraoxonase 2##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280	0.474236	CTCF.p2:11:0.474
chr9	75058978	75059123	reg1023232.p1	6.180	+	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	-78950	-	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	-79325	-	TSC_hg19_v1_chr9_+_74920350 AK095210	-138699	+	AF417578 NM_138691	77666	+	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	508895	-	NM_000689	509182	-	AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	0.964124	CTCF.p2:6:0.964
chr1	1677988	1678101	reg1021693.p2	6.179	+	AL049665 NM_001199787 NM_182838 TSC_hg19_v1_chr1_-_1677454 BC110653	-583	-	TSC_hg19_v1_chr1_-_1655767 AK303446 AF067518 AF067519 AF067520 AF067521 AF067522 AF067523 AK301495 AK304679 BC009375 AF067512 AF067513 AF067514 AF067515 AF067516 AF067517 AK303451 NM_033486 NM_033487 NM_033488 NM_033489 NM_033492 NM_033493 U04816 U04817 U04818 U04824 U07704 U07705 NM_024011 NM_033529	-22268	-	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	-53827	-	AK296722 NM_001198995	12036	-	TSC_hg19_v1_chr1_-_1709864 AK291728 AK290161 AK023114 NM_023018	31842	-	BC001709 TSC_hg19_v1_chr1_-_1710295 AK291599 NM_001198993	32225	-	AL049665|SLC35E2|9906|solute carrier family 35, member E2##NM_001199787|SLC35E2|9906|solute carrier family 35, member E2##NM_182838|SLC35E2|9906|solute carrier family 35, member E2##BC110653|SLC35E2B|728661|solute carrier family 35, member E2B##AK303446|CDK11B|984|cyclin-dependent kinase 11B##AF067518|CDK11A|728642|cyclin-dependent kinase 11A##AF067519|CDK11A|728642|cyclin-dependent kinase 11A##AF067520|CDK11A|728642|cyclin-dependent kinase 11A##AF067521|CDK11A|728642|cyclin-dependent kinase 11A##AF067522|CDK11A|728642|cyclin-dependent kinase 11A##AF067523|CDK11A|728642|cyclin-dependent kinase 11A##AK301495|CDK11B|984|cyclin-dependent kinase 11B##AK304679|CDK11B|984|cyclin-dependent kinase 11B##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AF067512|CDK11B|984|cyclin-dependent kinase 11B##AF067513|CDK11B|984|cyclin-dependent kinase 11B##AF067514|CDK11B|984|cyclin-dependent kinase 11B##AF067515|CDK11B|984|cyclin-dependent kinase 11B##AF067516|CDK11B|984|cyclin-dependent kinase 11B##AF067517|CDK11B|984|cyclin-dependent kinase 11B##AK303451|CDK11B|984|cyclin-dependent kinase 11B##NM_033486|CDK11B|984|cyclin-dependent kinase 11B##NM_033487|CDK11B|984|cyclin-dependent kinase 11B##NM_033488|CDK11B|984|cyclin-dependent kinase 11B##NM_033489|CDK11B|984|cyclin-dependent kinase 11B##NM_033492|CDK11B|984|cyclin-dependent kinase 11B##NM_033493|CDK11B|984|cyclin-dependent kinase 11B##U04816|CDK11B|984|cyclin-dependent kinase 11B##U04817|CDK11B|984|cyclin-dependent kinase 11B##U04818|CDK11B|984|cyclin-dependent kinase 11B##U04824|CDK11B|984|cyclin-dependent kinase 11B##U07704|CDK11A|728642|cyclin-dependent kinase 11A##U07705|CDK11A|728642|cyclin-dependent kinase 11A##NM_024011|CDK11A|728642|cyclin-dependent kinase 11A##NM_033529|CDK11A|728642|cyclin-dependent kinase 11A##AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B##AK296722|NADK|65220|NAD kinase##NM_001198995|NADK|65220|NAD kinase##AK291728|NADK|65220|NAD kinase##AK290161|NADK|65220|NAD kinase##AK023114|NADK|65220|NAD kinase##NM_023018|NADK|65220|NAD kinase##BC001709|NADK|65220|NAD kinase##AK291599|NADK|65220|NAD kinase##NM_001198993|NADK|65220|NAD kinase	0.102769	
chr1	207720425	207720552	reg1022393.p1	6.179	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	-50910	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-92827	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-225383	+	NM_175710 BC109190 BC109191	97999	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	204905	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	204995	+	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein	0.997827	CTCF.p2:15:0.998
chr14	103558027	103558127	reg1021012.p1	6.179	+	BC047871 BC048261 TSC_hg19_v1_chr14_-_103523736 AB032950 BC155541 NM_006035 BC078666 AF128625	-34340	-	AB384568 TSC_hg19_v1_chr14_-_103523568	-34536	-	TSC_hg19_v1_chr14_-_103430941 BX248752	-127119	-	BC113655 BC117375 NM_001077594 HQ258590	8441	+	TSC_hg19_v1_chr14_+_103589771 BC017818	31668	+	M92357 NM_006291 BC128449 BC128450 TSC_hg19_v1_chr14_+_103592873	34691	+	BC047871|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC048261|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AB032950|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC155541|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##NM_006035|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AF128625|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BX248752|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC113655|EXOC3L4|91828|exocyst complex component 3-like 4##BC117375|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001077594|EXOC3L4|91828|exocyst complex component 3-like 4##HQ258590|EXOC3L4|91828|exocyst complex component 3-like 4##BC017818|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2	0.439701	CTCF.p2:-20:0.440
chr7	34715499	34715621	reg1021450.p1	6.179	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	-17641	+	AK289963 NM_133468 AK096150 BC060868	-770418	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-1546479	+	DQ287932 NM_015283	362092	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	510232	-	TSC_hg19_v1_chr7_-_35293701 NM_001077653 NM_001166220 DQ986374	578170	-	AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##NM_001077653|TBX20|57057|T-box 20##NM_001166220|TBX20|57057|T-box 20##DQ986374|TBX20|57057|T-box 20	0.908245	CTCF.p2:1:0.908
chrX	132973229	132973369	reg1023025.p1	6.179	+	TSC_hg19_v1_chrX_-_132549514 AK312605 AY358507 BC017166	-423831	-	AB528412 CU677845 DQ891809 DQ894992 AF064826 AY052833 AF030186 NM_001448 TSC_hg19_v1_chrX_-_132549316	-424125	-	EU446842 BC074762 BC117336 BC126361 AB464736 AF219119 NM_016521	-621059	-	AB527294 CU690242 DQ349136 DQ349137 DQ349138 DQ893658 DQ895822 TSC_hg19_v1_chrX_-_133119622 Z37987 L47176 AK222761 AK222766 AK310689 BC035972 U50410	146250	-	TSC_hg19_v1_chrX_-_133119645 L47125 AK300168 NM_001164617 NM_001164618 NM_001164619 NM_004484	146352	-	NM_001101357	397777	+	AK312605|GPC4|2239|glypican 4##AY358507|GPC4|2239|glypican 4##BC017166|GPC4|2239|glypican 4##DQ891809|GPC4|2239|glypican 4##DQ894992|GPC4|2239|glypican 4##AF064826|GPC4|2239|glypican 4##AY052833|GPC4|2239|glypican 4##AF030186|GPC4|2239|glypican 4##NM_001448|GPC4|2239|glypican 4##EU446842|TFDP3|51270|transcription factor Dp family, member 3##BC074762|TFDP3|51270|transcription factor Dp family, member 3##BC117336|TFDP3|51270|transcription factor Dp family, member 3##BC126361|TFDP3|51270|transcription factor Dp family, member 3##AF219119|TFDP3|51270|transcription factor Dp family, member 3##NM_016521|TFDP3|51270|transcription factor Dp family, member 3##DQ349136|GPC3|2719|glypican 3##DQ349137|GPC3|2719|glypican 3##DQ349138|GPC3|2719|glypican 3##DQ893658|GPC3|2719|glypican 3##DQ895822|GPC3|2719|glypican 3##Z37987|GPC3|2719|glypican 3##L47176|GPC3|2719|glypican 3##AK222761|GPC3|2719|glypican 3##AK222766|GPC3|2719|glypican 3##AK310689|GPC3|2719|glypican 3##BC035972|GPC3|2719|glypican 3##U50410|GPC3|2719|glypican 3##L47125|GPC3|2719|glypican 3##AK300168|GPC3|2719|glypican 3##NM_001164617|GPC3|2719|glypican 3##NM_001164618|GPC3|2719|glypican 3##NM_001164619|GPC3|2719|glypican 3##NM_004484|GPC3|2719|glypican 3##NM_001101357|CCDC160|347475|coiled-coil domain containing 160	0.959974	CTCF.p2:1:0.960
chr11	66206560	66206665	reg1019650.p2	6.178	+	TSC_hg19_v1_chr11_-_66206308 BC108277 AB049638 AK290084 AK223112 BC005002 AF151871 NM_016050 NM_170738 NM_170739	-326	-	AK096253 NM_178864 TSC_hg19_v1_chr11_+_66188505 AB049469 BC105001 BC105003 BC143630 EU446888	-18051	+	AF029358 BC093634 BC143335 X86681 TSC_hg19_v1_chr11_-_66139222 AF034102 AF401235 NM_001532	-67435	-	AK094060 AX748433 NM_001243135	27185	+	TSC_hg19_v1_chr11_-_66234176 AK127603	27580	-	TSC_hg19_v1_chr11_+_66234371 NM_001098510 NM_001243136 NM_145065 AL834395 BC021256 AK074201 BC025723	27741	+	BC108277|MRPL11|65003|mitochondrial ribosomal protein L11##AB049638|MRPL11|65003|mitochondrial ribosomal protein L11##AK290084|MRPL11|65003|mitochondrial ribosomal protein L11##AK223112|MRPL11|65003|mitochondrial ribosomal protein L11##BC005002|MRPL11|65003|mitochondrial ribosomal protein L11##AF151871|MRPL11|65003|mitochondrial ribosomal protein L11##NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11##NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11##NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11##AK096253|NPAS4|266743|neuronal PAS domain protein 4##NM_178864|NPAS4|266743|neuronal PAS domain protein 4##AB049469|NPAS4|266743|neuronal PAS domain protein 4##BC105001|NPAS4|266743|neuronal PAS domain protein 4##BC105003|NPAS4|266743|neuronal PAS domain protein 4##BC143630|NPAS4|266743|neuronal PAS domain protein 4##EU446888|NPAS4|266743|neuronal PAS domain protein 4##AF029358|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC093634|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC143335|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##X86681|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF034102|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF401235|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##NM_001532|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AK094060|PELI3|246330|pellino homolog 3 (Drosophila)##NM_001243135|PELI3|246330|pellino homolog 3 (Drosophila)##AK127603|MRPL11|65003|mitochondrial ribosomal protein L11##NM_001098510|PELI3|246330|pellino homolog 3 (Drosophila)##NM_001243136|PELI3|246330|pellino homolog 3 (Drosophila)##NM_145065|PELI3|246330|pellino homolog 3 (Drosophila)##AL834395|PELI3|246330|pellino homolog 3 (Drosophila)##BC021256|PELI3|246330|pellino homolog 3 (Drosophila)##AK074201|PELI3|246330|pellino homolog 3 (Drosophila)##BC025723|PELI3|246330|pellino homolog 3 (Drosophila)	0.866857	CTCF.p2:1:0.867
chr13	60909824	60909935	reg1023010.p2	6.178	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-171778	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	-171898	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	-322559	-	BX537910 NM_001146071 NM_030794	60711	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	61600	+	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	1079374	-	NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20	0.977392	CTCF.p2:-13:0.977
chr1	92970380	92970448	reg1035258.p2	6.178	+	U67369 NM_005263 TSC_hg19_v1_chr1_-_92952458	-17964	-	BC032751 TSC_hg19_v1_chr1_-_92951630 NM_001127216	-18799	-	TSC_hg19_v1_chr1_-_92949508 AK123009	-20882	-	AB449875 AB587441 AF008915 AF042345 NM_005665	287541	-	TSC_hg19_v1_chr1_+_93297596 NM_000969 AK092963 AK095815 AK314720 AB055762	327150	+	TSC_hg19_v1_chr1_+_93297612 BC109370	327191	+	U67369|GFI1|2672|growth factor independent 1 transcription repressor##NM_005263|GFI1|2672|growth factor independent 1 transcription repressor##BC032751|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127216|GFI1|2672|growth factor independent 1 transcription repressor##AK123009|GFI1|2672|growth factor independent 1 transcription repressor##AB449875|EVI5|7813|ecotropic viral integration site 5##AF008915|EVI5|7813|ecotropic viral integration site 5##NM_005665|EVI5|7813|ecotropic viral integration site 5##NM_000969|RPL5|6125|ribosomal protein L5##AK092963|RPL5|6125|ribosomal protein L5##AK095815|RPL5|6125|ribosomal protein L5##AK314720|RPL5|6125|ribosomal protein L5##AB055762|RPL5|6125|ribosomal protein L5##BC109370|RPL5|6125|ribosomal protein L5	0.0	
chr8	84829243	84829369	reg1024044.p1	6.178	+	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	-2074833	-	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-2184547	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-2195780	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	266153	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	266237	+	TSC_hg19_v1_chr8_+_85095702 AK095026	266429	+	AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like	0.518882	CTCF.p2:0:0.519
chr9	140175414	140175529	reg1023548.p2	6.178	+	TSC_hg19_v1_chr9_+_140172277 AK000252 NM_017723	-3186	+	TSC_hg19_v1_chr9_+_140149888 AF464935 AB384577 AM393289	-25548	+	TSC_hg19_v1_chr9_+_140149768 BC019029	-25672	+	BC053618 NM_001004354 TSC_hg19_v1_chr9_-_140196724	21249	-	BC065002 TSC_hg19_v1_chr9_-_140317615 BC110879 AK000440 AK094438 BC039252 BC037355	142139	-	TSC_hg19_v1_chr9_-_140317652 BC033079 BC069205	142205	-	AK000252|C9orf167|54863|chromosome 9 open reading frame 167##NM_017723|C9orf167|54863|chromosome 9 open reading frame 167##AF464935|COBRA1|25920|cofactor of BRCA1##AM393289|COBRA1|25920|cofactor of BRCA1##BC019029|COBRA1|25920|cofactor of BRCA1##BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein##NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein##BC065002|EXD3|54932|exonuclease 3'-5' domain containing 3##BC110879|EXD3|54932|exonuclease 3'-5' domain containing 3##AK000440|EXD3|54932|exonuclease 3'-5' domain containing 3##AK094438|EXD3|54932|exonuclease 3'-5' domain containing 3##BC039252|EXD3|54932|exonuclease 3'-5' domain containing 3##BC037355|EXD3|54932|exonuclease 3'-5' domain containing 3##BC033079|EXD3|54932|exonuclease 3'-5' domain containing 3##BC069205|EXD3|54932|exonuclease 3'-5' domain containing 3	0.655666	CTCF.p2:3:0.656
chr11	125225227	125225342	reg1023192.p1	6.177	+	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	-190658	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	-190706	+	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	-243815	-	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	140857	-	TSC_hg19_v1_chr11_+_125439294 NM_001007277 NM_004879	214011	+	TSC_hg19_v1_chr11_+_125439332 AB209820	214041	+	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_001007277|EI24|9538|etoposide induced 2.4 mRNA##NM_004879|EI24|9538|etoposide induced 2.4 mRNA##AB209820|EI24|9538|etoposide induced 2.4 mRNA	0.939043	CTCF.p2:11:0.939
chr5	66283932	66284031	reg1022175.p1	6.177	+	AY830839 BC018692 NM_015183	-159378	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-391773	+	BC067770 NM_139168	-843319	+	BC109069 BC109070 D83597 NM_005582 AK313177	208619	-	TSC_hg19_v1_chr5_+_67511583 NM_181523	1227599	+	TSC_hg19_v1_chr5_+_67511602 BC094795	1227626	+	AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC067770|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_139168|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.966689	CTCF.p2:3:0.967
chr11	123940185	123940343	reg1023505.p1	6.176	+	AB529276 NM_001004463	-30557	-	BC136917 BC136920 NM_001004464	-39952	+	NM_001001953	-46545	+	TSC_hg19_v1_chr11_+_123986156 AY366503 AY366504 AY366505 AY366506 AY366507 AY366508 NM_001130142 NM_014622 NM_198315 BC001234 AK291698 AK295247	45870	+	BC136638 BC136639 NM_001007249	155106	+	AB463982 NM_001002905	180158	+	NM_001004463|OR10G7|390265|olfactory receptor, family 10, subfamily G, member 7##BC136917|OR10G8|219869|olfactory receptor, family 10, subfamily G, member 8##BC136920|OR10G8|219869|olfactory receptor, family 10, subfamily G, member 8##NM_001004464|OR10G8|219869|olfactory receptor, family 10, subfamily G, member 8##NM_001001953|OR10G9|219870|olfactory receptor, family 10, subfamily G, member 9##AY366503|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366504|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366505|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366506|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366507|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366508|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_001130142|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_014622|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_198315|VWA5A|4013|von Willebrand factor A domain containing 5A##BC001234|VWA5A|4013|von Willebrand factor A domain containing 5A##AK291698|VWA5A|4013|von Willebrand factor A domain containing 5A##AK295247|VWA5A|4013|von Willebrand factor A domain containing 5A##BC136638|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2##BC136639|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2##NM_001007249|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2##NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1	0.089352	
chr14	96362201	96362316	reg1022220.p1	6.176	+	AK023027 TSC_hg19_v1_chr14_+_96342762	-19513	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-181791	-	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	-209480	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	143388	+	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	308819	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	308938	+	AK023027|LOC100507043|100507043|uncharacterized LOC100507043##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2	0.094289	
chr1	92463312	92463410	reg1022970.p1	6.175	+	NM_001726 AF019085	-45632	+	AY338951 NM_001242805 NM_001242806 NM_001242807 NM_001242808 NM_001242810 NM_207189 AK316442	-48434	+	L07594 NM_001195684	-91803	-	TSC_hg19_v1_chr1_+_92495532 NM_173567 BC041475 AK074822 CU691994	32199	+	AY346333 NM_183242 BC013922	82515	+	NM_015237	169247	+	NM_001726|BRDT|676|bromodomain, testis-specific##AF019085|BRDT|676|bromodomain, testis-specific##AY338951|BRDT|676|bromodomain, testis-specific##NM_001242805|BRDT|676|bromodomain, testis-specific##NM_001242806|BRDT|676|bromodomain, testis-specific##NM_001242807|BRDT|676|bromodomain, testis-specific##NM_001242808|BRDT|676|bromodomain, testis-specific##NM_001242810|BRDT|676|bromodomain, testis-specific##NM_207189|BRDT|676|bromodomain, testis-specific##AK316442|BRDT|676|bromodomain, testis-specific##L07594|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195684|TGFBR3|7049|transforming growth factor, beta receptor III##NM_173567|EPHX4|253152|epoxide hydrolase 4##BC041475|EPHX4|253152|epoxide hydrolase 4##AK074822|EPHX4|253152|epoxide hydrolase 4##AY346333|BTBD8|284697|BTB (POZ) domain containing 8##NM_183242|BTBD8|284697|BTB (POZ) domain containing 8##BC013922|BTBD8|284697|BTB (POZ) domain containing 8##NM_015237|KIAA1107|23285|KIAA1107	0.847858	CTCF.p2:2:0.848
chr3	42613922	42614045	reg1024364.p1	6.175	+	TSC_hg19_v1_chr3_+_42544134 AK298115 AK314334 L13288 BC064424 X75299 AB590664 EF577396	-69804	+	TSC_hg19_v1_chr3_+_42544108 AK294609 NM_001251883 NM_001251884 NM_001251885 NM_004624 AK293548	-69876	+	AK056819 NM_001251882	-83193	+	TSC_hg19_v1_chr3_-_42623460 BC006178 BC018437 AY359041 AK292856 AK293133 AK074576 NM_001201584 NM_004206 NM_032970	9478	-	NM_016305 AF201950 TSC_hg19_v1_chr3_+_42632337	18334	+	TSC_hg19_v1_chr3_+_42632351 BC017804 AK312225 DQ891965 EU176663 BC020444	18396	+	AK298115|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK314334|VIPR1|7433|vasoactive intestinal peptide receptor 1##L13288|VIPR1|7433|vasoactive intestinal peptide receptor 1##BC064424|VIPR1|7433|vasoactive intestinal peptide receptor 1##X75299|VIPR1|7433|vasoactive intestinal peptide receptor 1##EF577396|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK294609|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251883|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251884|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251885|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_004624|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK293548|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK056819|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251882|VIPR1|7433|vasoactive intestinal peptide receptor 1##BC006178|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##BC018437|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AY359041|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK292856|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK293133|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK074576|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_001201584|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_004206|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_032970|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_016305|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##AF201950|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##BC017804|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##AK312225|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##DQ891965|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##EU176663|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##BC020444|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2	0.0	
chr5	173056836	173056981	reg1027056.p1	6.175	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-13235	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-13280	-	BC003114 TSC_hg19_v1_chr5_-_173043602	-13311	-	TSC_hg19_v1_chr5_+_173315343 NM_030627	258470	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	359282	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	415803	+	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein	0.902435	CTCF.p2:-10:0.902
chr1	172327656	172327793	reg1022321.p1	6.174	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-517021	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-576886	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-576910	+	AL035295 NM_139240 BC038410	62104	+	TSC_hg19_v1_chr1_-_172413202 BC006539	85464	-	TSC_hg19_v1_chr1_-_172413207 AK308201	85483	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.0	
chr12	109870713	109870797	reg1023100.p1	6.174	+	NM_001101421	-44232	+	AK131519 BC113073 BC146825 NM_213596 TSC_hg19_v1_chr12_-_109747027	-123722	-	TSC_hg19_v1_chr12_+_109665176 U34591	-205537	+	AF113208 BC040062 TSC_hg19_v1_chr12_-_109915106 AK056912 AK222548	44352	-	TSC_hg19_v1_chr12_-_109915133 AK092170 AX747390 AK027543 AY205299 NM_031954	44387	-	TSC_hg19_v1_chr12_+_109915438 BX537403 NM_130466 NM_183415 AK307385	44681	+	NM_001101421|MYO1H|283446|myosin IH##AK131519|FOXN4|121643|forkhead box N4##BC113073|FOXN4|121643|forkhead box N4##BC146825|FOXN4|121643|forkhead box N4##NM_213596|FOXN4|121643|forkhead box N4##U34591|ACACB|32|acetyl-CoA carboxylase beta##AF113208|KCTD10|83892|potassium channel tetramerisation domain containing 10##BC040062|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK056912|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK222548|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK092170|KCTD10|83892|potassium channel tetramerisation domain containing 10##AK027543|KCTD10|83892|potassium channel tetramerisation domain containing 10##AY205299|KCTD10|83892|potassium channel tetramerisation domain containing 10##NM_031954|KCTD10|83892|potassium channel tetramerisation domain containing 10##BX537403|UBE3B|89910|ubiquitin protein ligase E3B##NM_130466|UBE3B|89910|ubiquitin protein ligase E3B##NM_183415|UBE3B|89910|ubiquitin protein ligase E3B##AK307385|UBE3B|89910|ubiquitin protein ligase E3B	0.835044	CTCF.p2:0:0.835
chr12	94541728	94541909	reg1020366.p2	6.174	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-470635	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-576217	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-576998	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	686	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	311713	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	311824	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.0	
chr14	54468281	54468386	reg1021939.p1	6.174	+	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	-44800	-	NM_130851	-47064	-	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-848283	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	395388	+	TSC_hg19_v1_chr14_-_54908095 BX248284 AY358635 AK074781 AK307074 AK311897 AF070654 AF104398 NM_005776 BC103741	439783	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	487352	-	BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##NM_130851|BMP4|652|bone morphogenetic protein 4##NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BX248284|CNIH|10175|cornichon homolog (Drosophila)##AY358635|CNIH|10175|cornichon homolog (Drosophila)##AK074781|CNIH|10175|cornichon homolog (Drosophila)##AK307074|CNIH|10175|cornichon homolog (Drosophila)##AK311897|CNIH|10175|cornichon homolog (Drosophila)##AF070654|CNIH|10175|cornichon homolog (Drosophila)##AF104398|CNIH|10175|cornichon homolog (Drosophila)##NM_005776|CNIH|10175|cornichon homolog (Drosophila)##BC103741|CNIH|10175|cornichon homolog (Drosophila)##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta	0.0	
chr2	216974951	216975118	reg1023414.p1	6.174	+	TSC_hg19_v1_chr2_+_216974124 J04977 M30938 AK290740 BC095442 BC019027 AB489155 CU676354 DQ892660 DQ895925	-895	+	TSC_hg19_v1_chr2_+_216974112 AK222603	-925	+	TSC_hg19_v1_chr2_+_216974084 NM_021141	-982	+	TSC_hg19_v1_chr2_+_216986829 AK026166	11833	+	TSC_hg19_v1_chr2_-_217236666 AB037820 NM_020814	261673	-	NM_014140 TSC_hg19_v1_chr2_+_217277188 AK023780	302164	+	J04977|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##M30938|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK290740|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC095442|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC019027|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ892660|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ895925|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK222603|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##NM_021141|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AB037820|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_020814|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_014140|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AK023780|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	0.306914	CTCF.p2:-13:0.307
chr4	104125447	104125544	reg1022894.p2	6.174	+	AB527246 AB209996 TSC_hg19_v1_chr4_-_104119535 AK290362 NM_001813 Z15005	-5975	-	AK128463 TSC_hg19_v1_chr4_-_104020987 AF164790 AK023323 AK290160 AK291335 AK300626 BC037277 BC095414 AY358841 BC001953 NM_020139	-104495	-	NM_178833	-127326	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	515405	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	1286987	-	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	1290558	-	AB209996|CENPE|1062|centromere protein E, 312kDa##AK290362|CENPE|1062|centromere protein E, 312kDa##NM_001813|CENPE|1062|centromere protein E, 312kDa##Z15005|CENPE|1062|centromere protein E, 312kDa##AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_178833|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##AK127778|CXXC4|80319|CXXC finger protein 4	0.169565	
chr22	29598744	29598852	reg1021275.p1	6.173	+	TSC_hg19_v1_chr22_+_29469035 BC063787 NM_001039570 NM_032045 AK056425 AB059618	-129776	+	CR456405 BC074758 BC126262 BC126264 AL035364 NM_015370	-140949	-	TSC_hg19_v1_chr22_+_29449893 BC042614	-148873	+	TSC_hg19_v1_chr22_+_29601914 BC046358 NM_133455 CR456407 CU012965 CU013253 AB463024 AJ416090	3094	+	TSC_hg19_v1_chr22_-_29663824 AL050346 NM_012265	65070	-	NM_001163285 NM_001163286 NM_001163287 NM_005243 NM_013986 TSC_hg19_v1_chr22_+_29664088	65249	+	BC063787|KREMEN1|83999|kringle containing transmembrane protein 1##NM_001039570|KREMEN1|83999|kringle containing transmembrane protein 1##NM_032045|KREMEN1|83999|kringle containing transmembrane protein 1##AK056425|KREMEN1|83999|kringle containing transmembrane protein 1##AB059618|KREMEN1|83999|kringle containing transmembrane protein 1##CR456405|C22orf31|25770|chromosome 22 open reading frame 31##BC074758|C22orf31|25770|chromosome 22 open reading frame 31##BC126262|C22orf31|25770|chromosome 22 open reading frame 31##BC126264|C22orf31|25770|chromosome 22 open reading frame 31##AL035364|C22orf31|25770|chromosome 22 open reading frame 31##NM_015370|C22orf31|25770|chromosome 22 open reading frame 31##BC042614|ZNRF3|84133|zinc and ring finger 3##BC046358|EMID1|129080|EMI domain containing 1##NM_133455|EMID1|129080|EMI domain containing 1##CR456407|EMID1|129080|EMI domain containing 1##CU012965|EMID1|129080|EMI domain containing 1##CU013253|EMID1|129080|EMI domain containing 1##AJ416090|EMID1|129080|EMI domain containing 1##AL050346|RHBDD3|25807|rhomboid domain containing 3##NM_012265|RHBDD3|25807|rhomboid domain containing 3##NM_001163285|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163286|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163287|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_005243|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_013986|EWSR1|2130|Ewing sarcoma breakpoint region 1	0.967221	CTCF.p2:-33:0.954
chr10	49487183	49487364	reg1023586.p1	6.172	+	CR749241 NM_001018071	-4347	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	-279452	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-659331	-	TSC_hg19_v1_chr10_+_49514722 AK292523	27513	+	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	122399	+	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	325814	-	CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AK292523|MAPK8|5599|mitogen-activated protein kinase 8##BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22	0.0	
chr16	3174729	3174910	reg1023699.p4	6.172	+	TSC_hg19_v1_chr16_+_3162586 NM_001042428 NM_003456 AK313009 AF060865 BC002810	-12224	+	TSC_hg19_v1_chr16_-_3149286 AK074736	-25537	-	BC114452 AK027455 NM_032805	-31970	-	TSC_hg19_v1_chr16_-_3184862 AF098968	10052	-	AF017433 TSC_hg19_v1_chr16_+_3184980	10133	+	TSC_hg19_v1_chr16_+_3185058 NM_004220	10233	+	NM_001042428|ZNF205|7755|zinc finger protein 205##NM_003456|ZNF205|7755|zinc finger protein 205##AK313009|ZNF205|7755|zinc finger protein 205##AF060865|ZNF205|7755|zinc finger protein 205##BC002810|ZNF205|7755|zinc finger protein 205##AK074736|ZSCAN10|84891|zinc finger and SCAN domain containing 10##BC114452|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AK027455|ZSCAN10|84891|zinc finger and SCAN domain containing 10##NM_032805|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AF017433|ZNF213|7760|zinc finger protein 213##NM_004220|ZNF213|7760|zinc finger protein 213	0.799945	CTCF.p2:-8:0.281	CTCF.p2:21:0.519
chr17	10519908	10520078	reg1022337.p1	6.172	+	NM_001100112 BC093082 AK299440 AK300702 AK308102 BX510904 NM_017534	-67016	-	AK310004 NM_005963	-98135	-	AF111783 NM_017533	-147118	-	NM_002470 TSC_hg19_v1_chr17_-_10560627	40634	-	TSC_hg19_v1_chr17_-_10600869 DQ891605 DQ894798 AF026852 AF183424 BC015504 AK098826 AK315595 AK074588 NM_004589	80860	-	NM_020233 BC070155 AB073393 AK292629 BC001294	80955	+	NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult##NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult##AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_002470|MYH3|4621|myosin, heavy chain 3, skeletal muscle, embryonic##DQ891605|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##DQ894798|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF026852|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF183424|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##BC015504|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK098826|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK315595|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK074588|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_004589|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_020233|C17orf48|56985|chromosome 17 open reading frame 48##BC070155|C17orf48|56985|chromosome 17 open reading frame 48##AB073393|C17orf48|56985|chromosome 17 open reading frame 48##AK292629|C17orf48|56985|chromosome 17 open reading frame 48##BC001294|C17orf48|56985|chromosome 17 open reading frame 48	0.992449	CTCF.p2:25:0.992
chr19	50490466	50490632	reg1022555.p1	6.172	+	AK301031 BC030222 TSC_hg19_v1_chr19_+_50472920 BC039008 EU330985	-17648	+	AY358135 AB072038 TSC_hg19_v1_chr19_-_50464341 AF337818 NM_001135163 NM_052884	-26182	-	TSC_hg19_v1_chr19_-_50433002 NM_016553	-57546	-	AB031052 BC023556 TSC_hg19_v1_chr19_-_50528626 AK292918 AK294802 AK311220 AK303529	38052	-	TSC_hg19_v1_chr19_-_50528630 AK225154 AF514788 BC095449 BC003546 AK303010	38093	-	TSC_hg19_v1_chr19_-_50528683 NM_001025778 NM_016440	38194	-	BC030222|SIGLEC16|400709|sialic acid binding Ig-like lectin 16 (gene/pseudogene)##BC039008|SIGLEC16|400709|sialic acid binding Ig-like lectin 16 (gene/pseudogene)##AY358135|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##AB072038|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##AF337818|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##NM_001135163|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##NM_052884|SIGLEC11|114132|sialic acid binding Ig-like lectin 11##NM_016553|NUP62|23636|nucleoporin 62kDa##AB031052|VRK3|51231|vaccinia related kinase 3##BC023556|VRK3|51231|vaccinia related kinase 3##AK292918|VRK3|51231|vaccinia related kinase 3##AK294802|VRK3|51231|vaccinia related kinase 3##AK311220|VRK3|51231|vaccinia related kinase 3##AK303529|VRK3|51231|vaccinia related kinase 3##AK225154|VRK3|51231|vaccinia related kinase 3##AF514788|VRK3|51231|vaccinia related kinase 3##BC095449|VRK3|51231|vaccinia related kinase 3##BC003546|VRK3|51231|vaccinia related kinase 3##AK303010|VRK3|51231|vaccinia related kinase 3##NM_001025778|VRK3|51231|vaccinia related kinase 3##NM_016440|VRK3|51231|vaccinia related kinase 3	0.0	
chr3	186739584	186739765	reg1022019.p1	6.172	+	AK292879 BC040009 NM_003032 X62822 BC031476 L11720 X54363	-2	+	U67847 TSC_hg19_v1_chr3_+_186714361	-25326	+	X17247 TSC_hg19_v1_chr3_+_186648632	-91097	+	TSC_hg19_v1_chr3_-_186857285 L05096 AB063610 BC012328 NM_052969	117582	-	BC065202 NM_153708 BC034744 DQ890807 DQ893962 AY562235	175668	+	BC106945 BC106946 TSC_hg19_v1_chr3_-_187009489 AK291686 AK129893 AK304334 AK300663 BX647237 AK291157 CR749615 BC039724 NM_001031849 NM_001879 NM_139125	269965	-	AK292879|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC040009|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_003032|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X62822|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC031476|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##L11720|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X54363|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##L05096|RPL39L|116832|ribosomal protein L39-like##AB063610|RPL39L|116832|ribosomal protein L39-like##BC012328|RPL39L|116832|ribosomal protein L39-like##NM_052969|RPL39L|116832|ribosomal protein L39-like##BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1##NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1##BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1##AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1##BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)	0.0	
chr5	146749439	146749560	reg1023128.p1	6.172	+	AK094580 NM_001112724 NM_145001 TSC_hg19_v1_chr5_+_146614587 AK315942 BC021666 AK299099	-134893	+	AK294659 NM_181677 NM_181678 AK295347	-288477	-	BC031790 NM_181674 NM_181676	-313855	-	CU691634 AB384367 EU832180 EU832273 TSC_hg19_v1_chr5_-_146833229 BC039006 D78014 AK297223 NM_001387 Y07818	83766	-	EU007906 CU687310 EU832163 EU832257 TSC_hg19_v1_chr5_-_146889506	139967	-	BC077077 NM_001197294 TSC_hg19_v1_chr5_-_146889632	140127	-	AK094580|STK32A|202374|serine/threonine kinase 32A##NM_001112724|STK32A|202374|serine/threonine kinase 32A##NM_145001|STK32A|202374|serine/threonine kinase 32A##AK315942|STK32A|202374|serine/threonine kinase 32A##BC021666|STK32A|202374|serine/threonine kinase 32A##AK299099|STK32A|202374|serine/threonine kinase 32A##AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##EU832180|DPYSL3|1809|dihydropyrimidinase-like 3##EU832273|DPYSL3|1809|dihydropyrimidinase-like 3##BC039006|DPYSL3|1809|dihydropyrimidinase-like 3##D78014|DPYSL3|1809|dihydropyrimidinase-like 3##AK297223|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3##Y07818|DPYSL3|1809|dihydropyrimidinase-like 3##EU007906|DPYSL3|1809|dihydropyrimidinase-like 3##EU832163|DPYSL3|1809|dihydropyrimidinase-like 3##EU832257|DPYSL3|1809|dihydropyrimidinase-like 3##BC077077|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3	0.089705	
chr8	101504463	101504608	reg1024242.p1	6.172	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-182250	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-182354	-	AB271913 AB271914 AB029316 NM_015435	-189064	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	67405	-	AK093906 AX748361 NM_152628	157357	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	229271	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.499267	CTCF.p2:-72:0.389
chr8	4919988	4920116	reg1025401.p1	6.171	+	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	-67758	-	AY017307 TSC_hg19_v1_chr8_-_4852228	-67827	-	AK128880 TSC_hg19_v1_chr8_-_2585966	-2334070	-	TSC_hg19_v1_chr8_-_6264053 BC036625	1344005	-	TSC_hg19_v1_chr8_-_6264070 AK025595 BC024246	1344022	-	NM_001172574 NM_001172575 NM_024596 BC056195 BC030702 AK308387 TSC_hg19_v1_chr8_+_6264158	1344083	+	AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AK025595|LOC100287015|100287015|uncharacterized LOC100287015##NM_001172574|MCPH1|79648|microcephalin 1##NM_001172575|MCPH1|79648|microcephalin 1##NM_024596|MCPH1|79648|microcephalin 1##BC056195|MCPH1|79648|microcephalin 1##BC030702|MCPH1|79648|microcephalin 1##AK308387|MCPH1|79648|microcephalin 1	0.57871	CTCF.p2:-3:0.579
chr13	111269236	111269338	reg1023121.p2	6.170	+	TSC_hg19_v1_chr13_-_111268694 AK095260	-589	-	TSC_hg19_v1_chr13_+_111267898 AK093771 AK298917 AX748297 AK302117 AK057767 AK296758 NM_001242881 NM_018210 AK296227 AK024260 BC041028 AK001631 AK225129	-1245	+	TSC_hg19_v1_chr13_+_111267870 NM_001242882 NM_001242883	-1457	+	TSC_hg19_v1_chr13_-_111358444 AB062436	89151	-	TSC_hg19_v1_chr13_-_111358447 BC007220	89161	-	TSC_hg19_v1_chr13_-_111358460 AK022180 NM_024537	89180	-	AK093771|CARKD|55739|carbohydrate kinase domain containing##AK298917|CARKD|55739|carbohydrate kinase domain containing##AK302117|CARKD|55739|carbohydrate kinase domain containing##AK057767|CARKD|55739|carbohydrate kinase domain containing##AK296758|CARKD|55739|carbohydrate kinase domain containing##NM_001242881|CARKD|55739|carbohydrate kinase domain containing##NM_018210|CARKD|55739|carbohydrate kinase domain containing##AK296227|CARKD|55739|carbohydrate kinase domain containing##AK024260|CARKD|55739|carbohydrate kinase domain containing##BC041028|CARKD|55739|carbohydrate kinase domain containing##AK001631|CARKD|55739|carbohydrate kinase domain containing##AK225129|CARKD|55739|carbohydrate kinase domain containing##NM_001242882|CARKD|55739|carbohydrate kinase domain containing##NM_001242883|CARKD|55739|carbohydrate kinase domain containing##AB062436|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##BC007220|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##AK022180|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##NM_024537|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)	0.0	
chr15	91474999	91475143	reg1022085.p1	6.170	+	AK125721 BC045635 NM_001039675	-1662	+	BC136448 BC144111 NM_006122	-27652	+	AK289863 TSC_hg19_v1_chr15_+_91446685	-28446	+	TSC_hg19_v1_chr15_-_91475772 CU689746 NM_198527 BC033794 AK057584	665	-	NM_018671	3143	+	AK302979 TSC_hg19_v1_chr15_+_91478514 AK296964 AK291622	3435	+	AK125721|UNC45A|55898|unc-45 homolog A (C. elegans)##BC045635|UNC45A|55898|unc-45 homolog A (C. elegans)##NM_001039675|UNC45A|55898|unc-45 homolog A (C. elegans)##BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##AK289863|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##NM_198527|HDDC3|374659|HD domain containing 3##BC033794|HDDC3|374659|HD domain containing 3##AK057584|HDDC3|374659|HD domain containing 3##NM_018671|UNC45A|55898|unc-45 homolog A (C. elegans)##AK302979|UNC45A|55898|unc-45 homolog A (C. elegans)##AK296964|UNC45A|55898|unc-45 homolog A (C. elegans)##AK291622|UNC45A|55898|unc-45 homolog A (C. elegans)	0.0	
chr19	7198086	7198196	reg1019783.p3	6.170	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-98590	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-128426	+	AK315405 NM_001044387 NM_001044388 NM_024341	-128679	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	95819	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	261866	+	TSC_hg19_v1_chr19_+_7460061 AB011093	261936	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.012667	
chr2	80163005	80163110	reg1023123.p1	6.170	+	TSC_hg19_v1_chr2_+_79740175 AK295181	-422842	+	NM_001164883 NM_004389 BC052996 TSC_hg19_v1_chr2_+_79740147 BC040458	-422949	+	AK291973 AK311523 AK311523 AK311526 NM_138938 NM_002580 NM_138937	-776179	-	AB587576 AY182024 HQ257885 TSC_hg19_v1_chr2_-_80530981	367906	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	368468	-	TSC_hg19_v1_chr2_-_80531719 AK290512	368668	-	AK295181|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_001164883|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_004389|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC052996|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC040458|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##AK291973|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311526|REG3A|5068|regenerating islet-derived 3 alpha##NM_138938|REG3A|5068|regenerating islet-derived 3 alpha##NM_002580|REG3A|5068|regenerating islet-derived 3 alpha##NM_138937|REG3A|5068|regenerating islet-derived 3 alpha##AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##HQ257885|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	0.996312	CTCF.p2:8:0.996
chr5	107681370	107681521	reg1022255.p2	6.170	+	AK308672 NM_001962 U26403	-674855	-	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-4782964	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-5086988	+	TSC_hg19_v1_chr5_-_107717106 AK126722	35685	-	BC063316 NM_001163315	36353	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	382535	-	AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AB593118|HP07349|100652853|uncharacterized protein HP07349	0.844148	CTCF.p2:22:0.844
chr8	70468634	70468728	reg1023024.p2	6.170	+	AY101175 TSC_hg19_v1_chr8_+_70405081 AK055607 BX571746	-63592	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	-63642	+	TSC_hg19_v1_chr8_+_70379077 AK307951	-89601	+	BC137424 BC144618 NM_001146009	276722	-	AK022760 NM_001146008	276943	-	AK308488 AF205075 AK096879 NM_030958	278568	-	AY101175|SULF1|23213|sulfatase 1##AK055607|SULF1|23213|sulfatase 1##BX571746|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	0.0	
chrX	15665821	15665942	reg1023007.p1	6.170	+	AK315144 NM_021804 AB193259	-45647	-	NM_001721	-140451	+	NM_203281 AK291824 AK313568 X83107	-146912	+	BC014317 NM_020665	17272	-	AB021660 AK291050 NM_007220	90520	+	BC113454 BC113480 NM_005089 TSC_hg19_v1_chrX_+_15808594 D49677 BC050451 BC065719 AK309673 HQ258575	142718	+	AK315144|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##NM_021804|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##AB193259|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##NM_001721|BMX|660|BMX non-receptor tyrosine kinase##NM_203281|BMX|660|BMX non-receptor tyrosine kinase##AK291824|BMX|660|BMX non-receptor tyrosine kinase##AK313568|BMX|660|BMX non-receptor tyrosine kinase##X83107|BMX|660|BMX non-receptor tyrosine kinase##BC014317|TMEM27|57393|transmembrane protein 27##NM_020665|TMEM27|57393|transmembrane protein 27##AB021660|CA5B|11238|carbonic anhydrase VB, mitochondrial##AK291050|CA5B|11238|carbonic anhydrase VB, mitochondrial##NM_007220|CA5B|11238|carbonic anhydrase VB, mitochondrial##BC113454|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC113480|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##NM_005089|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##D49677|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC050451|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC065719|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AK309673|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##HQ258575|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2	0.976696	CTCF.p2:-11:0.977
chr17	26560410	26560546	reg1023281.p1	6.169	+	AB384832 AK024686 TSC_hg19_v1_chr17_+_26370066	-190477	+	TSC_hg19_v1_chr17_+_26369661 AK315315 AF197898 NM_016231 AF180819	-190825	+	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	-340087	-	NM_014573 TSC_hg19_v1_chr17_+_26646214 L19183 AK299511 AK307678 BC017362 BC091504 AK293331	85715	+	TSC_hg19_v1_chr17_-_26662482 AY224601 BC038094 AK297769 BC002640 NM_174887 AK309232	102008	-	NM_021137 TSC_hg19_v1_chr17_+_26662786 BC003694 AK300584 AK312387 BC001643 BC001949 BC006208 M80783	102225	+	AK024686|NLK|51701|nemo-like kinase##AK315315|NLK|51701|nemo-like kinase##AF197898|NLK|51701|nemo-like kinase##NM_016231|NLK|51701|nemo-like kinase##AF180819|NLK|51701|nemo-like kinase##AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108##NM_014573|TMEM97|27346|transmembrane protein 97##L19183|TMEM97|27346|transmembrane protein 97##AK299511|TMEM97|27346|transmembrane protein 97##AK307678|TMEM97|27346|transmembrane protein 97##BC017362|TMEM97|27346|transmembrane protein 97##BC091504|TMEM97|27346|transmembrane protein 97##AK293331|TMEM97|27346|transmembrane protein 97##AY224601|IFT20|90410|intraflagellar transport 20 homolog (Chlamydomonas)##BC038094|IFT20|90410|intraflagellar transport 20 homolog (Chlamydomonas)##BC002640|IFT20|90410|intraflagellar transport 20 homolog (Chlamydomonas)##NM_174887|IFT20|90410|intraflagellar transport 20 homolog (Chlamydomonas)##NM_021137|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##BC003694|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##AK300584|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##AK312387|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##BC001643|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##BC001949|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##M80783|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	0.0	
chr19	8386201	8386301	reg1023735.p1	6.169	+	TSC_hg19_v1_chr19_-_8373195 CR457174 EU831651 BC036814 BC007083 AY358420 AL365455 BC000668 AK222623 AK315656 AL136652 AK058014 AF161254 NM_001165895 NM_016579	-13042	-	TSC_hg19_v1_chr19_+_8274253 NM_024552 AK222621 AK225394 AK022151 BC063621	-112003	+	AB384635 AB053450 BC153882 NM_032447	-173876	-	TSC_hg19_v1_chr19_-_8386260 AF050637 CR456915 CR542266 BC107892 AF054178	6	-	TSC_hg19_v1_chr19_-_8386300 BC003102 NM_005001	35	-	TSC_hg19_v1_chr19_+_8386383 AB055779 AK293636 AK301638 AK311925 BC070217 NM_001031 BC070218 BC000354 BC018810 L05091 U58682 BC021239 DQ891357 DQ894538 CR457055	143	+	CR457174|CD320|51293|CD320 molecule##EU831651|CD320|51293|CD320 molecule##BC036814|CD320|51293|CD320 molecule##BC007083|CD320|51293|CD320 molecule##AY358420|CD320|51293|CD320 molecule##AL365455|CD320|51293|CD320 molecule##BC000668|CD320|51293|CD320 molecule##AK222623|CD320|51293|CD320 molecule##AK315656|CD320|51293|CD320 molecule##AL136652|CD320|51293|CD320 molecule##AK058014|CD320|51293|CD320 molecule##AF161254|CD320|51293|CD320 molecule##NM_001165895|CD320|51293|CD320 molecule##NM_016579|CD320|51293|CD320 molecule##NM_024552|CERS4|79603|ceramide synthase 4##AK222621|CERS4|79603|ceramide synthase 4##AK225394|CERS4|79603|ceramide synthase 4##AK022151|CERS4|79603|ceramide synthase 4##BC063621|CERS4|79603|ceramide synthase 4##AB053450|FBN3|84467|fibrillin 3##BC153882|FBN3|84467|fibrillin 3##NM_032447|FBN3|84467|fibrillin 3##AF050637|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR456915|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR542266|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##BC107892|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##AF054178|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##BC003102|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##NM_005001|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##AK293636|RPS28|6234|ribosomal protein S28##AK301638|RPS28|6234|ribosomal protein S28##AK311925|RPS28|6234|ribosomal protein S28##BC070217|RPS28|6234|ribosomal protein S28##NM_001031|RPS28|6234|ribosomal protein S28##BC070218|RPS28|6234|ribosomal protein S28##BC000354|RPS28|6234|ribosomal protein S28##BC018810|RPS28|6234|ribosomal protein S28##L05091|RPS28|6234|ribosomal protein S28##U58682|RPS28|6234|ribosomal protein S28##BC021239|RPS28|6234|ribosomal protein S28##DQ891357|RPS28|6234|ribosomal protein S28##DQ894538|RPS28|6234|ribosomal protein S28##CR457055|RPS28|6234|ribosomal protein S28	0.108659	
chr7	109730308	109730428	reg1025041.p1	6.169	+	NM_001024607	-1205732	-	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-1519994	+	TSC_hg19_v1_chr7_+_108210292 AK092204	-1520070	+	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	1000755	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	1472116	-	TSC_hg19_v1_chr7_-_111428948 AK294820	1698643	-	NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AK092204|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK294820|DOCK4|9732|dedicator of cytokinesis 4	0.674268	CTCF.p2:4:0.674
chr8	16637422	16637541	reg1023804.p1	6.169	+	TSC_hg19_v1_chr8_-_16050222 NM_002445 NM_138715 NM_138716	-587222	-	D90187 TSC_hg19_v1_chr8_-_16050161 AK293409 D90188	-587301	-	TSC_hg19_v1_chr8_+_15397771 U42349 BT020002 DQ892936 DQ896185	-1239631	+	AB030648 AB590732 BC096720 BC098128 BC098153 BC098339 BC127125 BC141979 BC141980 BC137446 BC137447 AB044277 NM_019851	222125	-	TSC_hg19_v1_chr8_+_16884746 NM_181723 BC045553 EU832320 EU832405 BC032868	247290	+	TSC_hg19_v1_chr8_+_17013493 BC050272	376030	+	NM_002445|MSR1|4481|macrophage scavenger receptor 1##NM_138715|MSR1|4481|macrophage scavenger receptor 1##NM_138716|MSR1|4481|macrophage scavenger receptor 1##D90187|MSR1|4481|macrophage scavenger receptor 1##AK293409|MSR1|4481|macrophage scavenger receptor 1##D90188|MSR1|4481|macrophage scavenger receptor 1##U42349|TUSC3|7991|tumor suppressor candidate 3##BT020002|TUSC3|7991|tumor suppressor candidate 3##DQ892936|TUSC3|7991|tumor suppressor candidate 3##DQ896185|TUSC3|7991|tumor suppressor candidate 3##AB030648|FGF20|26281|fibroblast growth factor 20##BC096720|FGF20|26281|fibroblast growth factor 20##BC098128|FGF20|26281|fibroblast growth factor 20##BC098153|FGF20|26281|fibroblast growth factor 20##BC098339|FGF20|26281|fibroblast growth factor 20##BC127125|FGF20|26281|fibroblast growth factor 20##BC141979|FGF20|26281|fibroblast growth factor 20##BC141980|FGF20|26281|fibroblast growth factor 20##BC137446|FGF20|26281|fibroblast growth factor 20##BC137447|FGF20|26281|fibroblast growth factor 20##AB044277|FGF20|26281|fibroblast growth factor 20##NM_019851|FGF20|26281|fibroblast growth factor 20##NM_181723|EFHA2|286097|EF-hand domain family, member A2##BC045553|EFHA2|286097|EF-hand domain family, member A2##EU832320|EFHA2|286097|EF-hand domain family, member A2##EU832405|EFHA2|286097|EF-hand domain family, member A2##BC032868|EFHA2|286097|EF-hand domain family, member A2##BC050272|ZDHHC2|51201|zinc finger, DHHC-type containing 2	0.373017	CTCF.p2:-15:0.373
chrX	117459535	117459640	reg1021189.p1	6.169	+	AK302713 NM_001168301	-208285	-	AL591986 TSC_hg19_v1_chrX_-_117250764 AK316509 NM_001168302 NM_001168303	-208862	-	AK296324 NM_001168299	-340259	-	TSC_hg19_v1_chrX_+_117480068 NM_001184965 NM_001184966 NM_019045 AK127556 BX537578 AL833605 BX538087 AK299711 BC028697 BX648150	20578	+	TSC_hg19_v1_chrX_+_117480490 AM393332 AM393787 EU831942 EU832037 AK304432	20875	+	TSC_hg19_v1_chrX_+_117526665 AL834210	67100	+	AK302713|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168301|KLHL13|90293|kelch-like 13 (Drosophila)##AL591986|KLHL13|90293|kelch-like 13 (Drosophila)##AK316509|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)##AK296324|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001184965|WDR44|54521|WD repeat domain 44##NM_001184966|WDR44|54521|WD repeat domain 44##NM_019045|WDR44|54521|WD repeat domain 44##AK127556|WDR44|54521|WD repeat domain 44##BX537578|WDR44|54521|WD repeat domain 44##AL833605|WDR44|54521|WD repeat domain 44##BX538087|WDR44|54521|WD repeat domain 44##AK299711|WDR44|54521|WD repeat domain 44##BC028697|WDR44|54521|WD repeat domain 44##BX648150|WDR44|54521|WD repeat domain 44##AM393332|WDR44|54521|WD repeat domain 44##AM393787|WDR44|54521|WD repeat domain 44##EU831942|WDR44|54521|WD repeat domain 44##EU832037|WDR44|54521|WD repeat domain 44##AK304432|WDR44|54521|WD repeat domain 44##AL834210|WDR44|54521|WD repeat domain 44	0.687179	CTCF.p2:5:0.687
chr7	129222746	129222837	reg1020299.p1	6.168	+	BC050400 NM_001195243 BC035417	-80427	+	TSC_hg19_v1_chr7_+_129074283 NM_001134336 NM_020704 AK290165 BC019064 AB032996 CU676366 AB463039 AM392619 AM392944 AM392960 AM393447	-148518	+	AK316073 NM_001130722	-207308	+	TSC_hg19_v1_chr7_-_129251474 AK123679	28687	-	TSC_hg19_v1_chr7_+_129251531 NM_005011	28750	+	AK293351 TSC_hg19_v1_chr7_+_129251621 BC016925 AK290891	28821	+	BC050400|LOC100287482|100287482|uncharacterized LOC100287482##NM_001195243|LOC100287482|100287482|uncharacterized LOC100287482##BC035417|LOC100287482|100287482|uncharacterized LOC100287482##NM_001134336|FAM40B|57464|family with sequence similarity 40, member B##NM_020704|FAM40B|57464|family with sequence similarity 40, member B##AK290165|FAM40B|57464|family with sequence similarity 40, member B##BC019064|FAM40B|57464|family with sequence similarity 40, member B##AB032996|FAM40B|57464|family with sequence similarity 40, member B##AM392619|FAM40B|57464|family with sequence similarity 40, member B##AM392944|FAM40B|57464|family with sequence similarity 40, member B##AM392960|FAM40B|57464|family with sequence similarity 40, member B##AM393447|FAM40B|57464|family with sequence similarity 40, member B##AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_005011|NRF1|4899|nuclear respiratory factor 1##AK293351|NRF1|4899|nuclear respiratory factor 1##BC016925|NRF1|4899|nuclear respiratory factor 1##AK290891|NRF1|4899|nuclear respiratory factor 1	0.473876	CTCF.p2:-21:0.302
chr7	116952797	116952898	reg1019826.p1	6.167	+	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	-292482	+	TSC_hg19_v1_chr7_+_116660271 AK093212	-292580	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	-359274	+	BC078170 AK056742 NM_003391 X07876	10488	-	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	114698	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	167191	+	AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##AK093212|ST7|7982|suppression of tumorigenicity 7##AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	0.013245	
chr10	65389279	65389352	reg1020916.p1	6.165	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-108074	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-108153	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-108200	+	NM_178011 BX640611 AY358315 BC111492	3296500	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	4036081	-	AF091606 AK313882 NM_013266	4066622	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.0	
chr17	28663707	28663887	reg1015672.p2	6.165	+	AK290266 BC137201 BC137202 AY358153 NM_206832 AK172838	-2735	-	NM_000386 TSC_hg19_v1_chr17_-_28619220	-44594	-	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	-44838	-	TSC_hg19_v1_chr17_+_28705953 NM_001304 BC051702 BC045549 BC054116	42142	+	TSC_hg19_v1_chr17_+_28705963 D85390 BC045624	42169	+	TSC_hg19_v1_chr17_+_28705984 U65090 AB385118	42192	+	AK290266|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##BC137201|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##BC137202|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##AY358153|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##NM_206832|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##AK172838|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##NM_000386|BLMH|642|bleomycin hydrolase##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase##NM_001304|CPD|1362|carboxypeptidase D##BC051702|CPD|1362|carboxypeptidase D##BC045549|CPD|1362|carboxypeptidase D##BC054116|CPD|1362|carboxypeptidase D##D85390|CPD|1362|carboxypeptidase D##BC045624|CPD|1362|carboxypeptidase D##U65090|CPD|1362|carboxypeptidase D	0.0	
chr20	39620117	39620269	reg1007655.p2	6.165	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-302316	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-2029204	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-2065125	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	37301	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	37471	+	TSC_hg19_v1_chr20_+_39765861 AB210028	145669	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.0	
chr9	5899424	5899569	reg1025177.p1	6.165	+	U06654 BC014423 AK312149 NM_005511 U06452	-8642	+	TSC_hg19_v1_chr9_-_5833082 NM_024896	-66418	-	TSC_hg19_v1_chr9_-_5833067 AK127218	-66429	-	BC108654 TSC_hg19_v1_chr9_-_5968443	68912	-	TSC_hg19_v1_chr9_-_6007953 NM_001017969	108468	-	AF039023 AK300408 BC098406 TSC_hg19_v1_chr9_-_6015616 AK307840 BX537405 NM_001243202 NM_001243203 NM_012416	116135	-	U06654|MLANA|2315|melan-A##BC014423|MLANA|2315|melan-A##AK312149|MLANA|2315|melan-A##NM_005511|MLANA|2315|melan-A##U06452|MLANA|2315|melan-A##NM_024896|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AK127218|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##NM_001017969|KIAA2026|158358|KIAA2026##AF039023|RANBP6|26953|RAN binding protein 6##AK300408|RANBP6|26953|RAN binding protein 6##BC098406|RANBP6|26953|RAN binding protein 6##BX537405|RANBP6|26953|RAN binding protein 6##NM_001243202|RANBP6|26953|RAN binding protein 6##NM_001243203|RANBP6|26953|RAN binding protein 6##NM_012416|RANBP6|26953|RAN binding protein 6	0.933772	CTCF.p2:4:0.934
chr10	73808562	73808731	reg1000282.p2	6.164	+	TSC_hg19_v1_chr10_+_73723993 AB017915 NM_004273 AB012192	-84589	+	TSC_hg19_v1_chr10_-_73611059 NM_001042465 NM_001042466 NM_002778	-197555	-	AK299184 TSC_hg19_v1_chr10_-_73611043	-197603	-	AK292328 TSC_hg19_v1_chr10_-_73848270 AK294008 AK307091	39622	-	TSC_hg19_v1_chr10_-_73848286 AY358921	39636	-	TSC_hg19_v1_chr10_-_73848310 AJ001453	39694	-	AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_001042465|PSAP|5660|prosaposin##NM_001042466|PSAP|5660|prosaposin##NM_002778|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin##AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AY358921|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AJ001453|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	0.0	
chr11	26544576	26544701	reg1022830.p2	6.164	+	NM_031418 AK302659	-190908	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-2025989	+	NM_001195637	-3662667	-	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	49102	-	BC049207 NM_178498	198921	-	NM_203371 TSC_hg19_v1_chr11_+_27015658	471004	+	NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)	0.999193	CTCF.p2:6:0.999
chr14	75608862	75608955	reg1024255.p2	6.164	+	AK023615 TSC_hg19_v1_chr14_-_75600130	-8788	-	TSC_hg19_v1_chr14_-_75593752 AB082526 AK128693 NM_033116	-15156	-	AY048580 AB463142 AY080896 TSC_hg19_v1_chr14_-_75593718 BC093881 BC112101	-15238	-	TSC_hg19_v1_chr14_-_75643301 AL832012 AJ004913 X97442 L40397 AK222972 AK310371 BX248754	34386	-	TSC_hg19_v1_chr14_-_75643322 AK296800 AK312384	34412	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	34425	-	AK023615|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AB082526|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##AK128693|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##NM_033116|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##AY048580|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##AY080896|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##BC093881|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##BC112101|NEK9|91754|NIMA (never in mitosis gene a)- related kinase 9##AL832012|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AJ004913|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##X97442|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##L40397|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK222972|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK310371|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BX248754|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK296800|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK312384|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)	0.220899	CTCF.p2:-7:0.221
chr19	28047777	28047846	reg1015123.p1	6.164	+	TSC_hg19_v1_chr19_+_24269988 AF054180 NM_203282 BC056243 AK291286 BC043147 BC139749	-3777842	+	TSC_hg19_v1_chr19_+_24216256 AK092150 AK092080 AK303431	-3831555	+	TSC_hg19_v1_chr19_+_24097711 NM_001244038 AX721133 BC046415 AB593087	-3950117	+	TSC_hg19_v1_chr19_+_28284377 BC024732	236577	+	TSC_hg19_v1_chr19_-_28284831 AK311452	237022	-	TSC_hg19_v1_chr19_+_28284946 AK095009	237117	+	AF054180|ZNF254|9534|zinc finger protein 254##NM_203282|ZNF254|9534|zinc finger protein 254##BC056243|ZNF254|9534|zinc finger protein 254##AK291286|ZNF254|9534|zinc finger protein 254##BC043147|ZNF254|9534|zinc finger protein 254##BC139749|ZNF254|9534|zinc finger protein 254##AK303431|ZNF254|9534|zinc finger protein 254##NM_001244038|ZNF726|730087|zinc finger protein 726##BC046415|ZNF726|730087|zinc finger protein 726##AK311452|LOC148189|148189|uncharacterized LOC148189	0.0	
chr2	219271347	219271453	reg1020849.p1	6.164	+	TSC_hg19_v1_chr2_+_219264739 BC012977 AB463546 EU446878 CU680458 AY279529	-6619	+	AF229162 NM_021198 NM_182642 TSC_hg19_v1_chr2_+_219264577	-6860	+	NM_001206878	-8340	+	TSC_hg19_v1_chr2_+_219283845 NM_007127 AK223398 AK300965 AK313709	12440	+	TSC_hg19_v1_chr2_-_219433075 BC133007 BC133009 BC144249 BC144252 AK095577 AK128583 BX538024 BC050461 BC112901 AL832645 NM_020935	161653	-	AK293281 TSC_hg19_v1_chr2_+_219433334 AB500892	161966	+	BC012977|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##EU446878|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##AY279529|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##AF229162|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##NM_021198|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##NM_182642|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##NM_001206878|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##NM_007127|VIL1|7429|villin 1##AK223398|VIL1|7429|villin 1##AK300965|VIL1|7429|villin 1##AK313709|VIL1|7429|villin 1##BC133007|USP37|57695|ubiquitin specific peptidase 37##BC133009|USP37|57695|ubiquitin specific peptidase 37##BC144249|USP37|57695|ubiquitin specific peptidase 37##BC144252|USP37|57695|ubiquitin specific peptidase 37##AK095577|USP37|57695|ubiquitin specific peptidase 37##AK128583|USP37|57695|ubiquitin specific peptidase 37##BX538024|USP37|57695|ubiquitin specific peptidase 37##BC050461|USP37|57695|ubiquitin specific peptidase 37##BC112901|USP37|57695|ubiquitin specific peptidase 37##AL832645|USP37|57695|ubiquitin specific peptidase 37##NM_020935|USP37|57695|ubiquitin specific peptidase 37##AK293281|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##AB500892|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	0.0	
chr7	28966762	28966873	reg1022856.p1	6.164	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	-241134	+	AK292916 TSC_hg19_v1_chr7_+_28530784	-436052	+	L05911 NM_004904	-491584	+	CU690330 TSC_hg19_v1_chr7_-_28997732	30880	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	31112	-	AK293803 NM_014817 TSC_hg19_v1_chr7_-_28998036	31215	-	L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5##AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats##NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats	0.990247	CTCF.p2:7:0.990
chr8	140035458	140035612	reg1023642.p1	6.164	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	-109291	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-526429	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-3565334	+	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	679747	-	AB067469 TSC_hg19_v1_chr8_-_141467841	1432290	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	1432323	-	AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9	0.999598	CTCF.p2:3:1.000
chr1	156658900	156659070	reg1004588.p1	6.163	+	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	-11840	-	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	-47031	+	TSC_hg19_v1_chr1_+_156611723 AY358372 NM_021948 NM_198427	-47256	+	BT019827 CR450357 DQ892265 DQ896851 M68867 BC001109 AB593017 AK312007 TSC_hg19_v1_chr1_-_156675376 NM_001878 NM_001199723	16437	-	AY391837 AK022733 NM_030980	38683	-	TSC_hg19_v1_chr1_-_156698238 BC000575 AK095697	39242	-	BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##AY358372|BCAN|63827|brevican##NM_021948|BCAN|63827|brevican##NM_198427|BCAN|63827|brevican##BT019827|CRABP2|1382|cellular retinoic acid binding protein 2##CR450357|CRABP2|1382|cellular retinoic acid binding protein 2##DQ892265|CRABP2|1382|cellular retinoic acid binding protein 2##DQ896851|CRABP2|1382|cellular retinoic acid binding protein 2##M68867|CRABP2|1382|cellular retinoic acid binding protein 2##BC001109|CRABP2|1382|cellular retinoic acid binding protein 2##AB593017|CRABP2|1382|cellular retinoic acid binding protein 2##AK312007|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001878|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001199723|CRABP2|1382|cellular retinoic acid binding protein 2##AY391837|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK022733|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_030980|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##BC000575|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK095697|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2	0.811249	CTCF.p2:-21:0.811
chr12	22682333	22682459	reg1022390.p1	6.163	+	BC117285 BC126162 BC031081 BC046158 AK315340 EU041716 NM_003034 X77922 TSC_hg19_v1_chr12_-_22487789	-194716	-	AF271388 TSC_hg19_v1_chr12_+_22199226 AF397212	-483167	+	TSC_hg19_v1_chr12_+_22199207 BC016609 NM_018686 AL832975 AK022927 AK222981	-483224	+	AB385344 AB011100 BC042498 TSC_hg19_v1_chr12_-_22697128 AK299353	14743	-	BC117143 BC143859 BC143860 BC143878 TSC_hg19_v1_chr12_-_22697430 AK295862	14993	-	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	15070	-	BC117285|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC126162|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC031081|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC046158|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AK315340|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##EU041716|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##NM_003034|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##X77922|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##BC016609|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##NM_018686|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AL832975|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK022927|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK222981|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AB011100|KIAA0528|9847|KIAA0528##BC042498|KIAA0528|9847|KIAA0528##AK299353|KIAA0528|9847|KIAA0528##BC117143|KIAA0528|9847|KIAA0528##BC143859|KIAA0528|9847|KIAA0528##BC143860|KIAA0528|9847|KIAA0528##BC143878|KIAA0528|9847|KIAA0528##AK295862|KIAA0528|9847|KIAA0528##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528	0.062231	
chr7	116426909	116427039	reg1023752.p2	6.163	+	TSC_hg19_v1_chr7_+_116395441 BC127890	-31523	+	AK296974 TSC_hg19_v1_chr7_+_116364175	-62799	+	TSC_hg19_v1_chr7_+_116312490 EU176015 J02958 NM_000245 NM_001127500 X54559 DQ656040 BC130420 AK309532	-114502	+	TSC_hg19_v1_chr7_+_116451073 DQ655955 DQ655956	24124	+	TSC_hg19_v1_chr7_+_116502581 NM_006136	75583	+	AK314808 TSC_hg19_v1_chr7_+_116502591	75617	+	AK296974|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##EU176015|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##DQ655955|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##DQ655956|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	0.1925	
chr18	55861453	55861575	reg1024187.p2	6.162	+	TSC_hg19_v1_chr18_+_55816551 AY112983 AY112984 DQ181796 NM_001144965 NM_001144968 NM_001144969 NM_001144971 AY112985	-44957	+	AF385931 NM_001144964	-147057	+	TSC_hg19_v1_chr18_+_55712924 AY243322	-148607	+	TSC_hg19_v1_chr18_+_55862636 NM_001144970 AK294963 AY243318 AB007899	1216	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	27248	+	TSC_hg19_v1_chr18_+_55888802 AK300444	27289	+	AY112983|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112984|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ181796|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144965|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144968|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144969|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144971|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112985|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AF385931|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144964|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243322|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.90647	CTCF.p2:-13:0.906
chr21	46221067	46221220	reg1026328.p1	6.162	+	BC115414 BC115415 AJ487962 NM_144991	-89666	-	AB076364 BC137339 BC137341 NM_198699	-104057	+	AB076363 BC127648 BC119713 BC120942 AJ566388 NM_181686	-119076	-	BT006914 AB590900 TSC_hg19_v1_chr21_-_46221720 AF032456 BC008351 BC054341 BC001738 AL355686 BC011569 AK290629 NM_001202489 NM_003343 NM_182688	573	-	BT007008 CR542173 CR542188 CU674002 AB528029 TSC_hg19_v1_chr21_-_46237965	16780	-	TSC_hg19_v1_chr21_-_46237967 BC000036 X99584	16825	-	BC115414|TSPEAR|54084|thrombospondin-type laminin G domain and EAR repeats##BC115415|TSPEAR|54084|thrombospondin-type laminin G domain and EAR repeats##AJ487962|TSPEAR|54084|thrombospondin-type laminin G domain and EAR repeats##NM_144991|TSPEAR|54084|thrombospondin-type laminin G domain and EAR repeats##AB076364|KRTAP10-12|386685|keratin associated protein 10-12##BC137339|KRTAP10-12|386685|keratin associated protein 10-12##BC137341|KRTAP10-12|386685|keratin associated protein 10-12##NM_198699|KRTAP10-12|386685|keratin associated protein 10-12##AB076363|KRTAP12-1|353332|keratin associated protein 12-1##BC127648|KRTAP12-1|353332|keratin associated protein 12-1##BC119713|KRTAP12-1|353332|keratin associated protein 12-1##BC120942|KRTAP12-1|353332|keratin associated protein 12-1##AJ566388|KRTAP12-1|353332|keratin associated protein 12-1##NM_181686|KRTAP12-1|353332|keratin associated protein 12-1##BT006914|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##AF032456|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BC008351|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BC054341|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BC001738|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BC011569|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##AK290629|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##NM_001202489|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##NM_003343|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##NM_182688|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BT007008|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##CR542173|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##CR542188|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##BC000036|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##X99584|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)	0.0	
chr3	136936721	136936853	reg1022574.p2	6.162	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-259957	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-287450	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	-355695	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	546360	+	AK098474 NM_001002026 AF349452	780892	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	792216	+	AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18	0.239349	
chr3	55522585	55522672	reg1022868.p3	6.162	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-1010	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-1296	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-7220	-	BC111550 BC112391 AB002376 NM_015576	979749	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	1068574	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	1068618	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.023691	
chr16	57509870	57509993	reg1019956.p2	6.161	+	TSC_hg19_v1_chr16_+_57496590 BC003159 AK300124 AK293112 BC028157 AJ224143 AJ224144 J05448 BC000409 AB464040 AF008443 CR542041 DQ891411 DQ894586 EU176305	-13326	+	TSC_hg19_v1_chr16_+_57496570 AK295582	-13360	+	TSC_hg19_v1_chr16_+_57496563 NM_032940	-13373	+	BC003541 TSC_hg19_v1_chr16_-_57520403 NM_018110 AK001350	10454	-	BC008285 BC009941 NM_033212	60534	-	TSC_hg19_v1_chr16_+_57576554 AK303661 AK292783 AK160368 AY358447 AK301357	66623	+	BC003159|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AK300124|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AK293112|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##BC028157|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AJ224143|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AJ224144|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##J05448|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##BC000409|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AF008443|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##CR542041|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##DQ891411|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##DQ894586|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##EU176305|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##BC003541|DOK4|55715|docking protein 4##NM_018110|DOK4|55715|docking protein 4##AK001350|DOK4|55715|docking protein 4##BC008285|CCDC102A|92922|coiled-coil domain containing 102A##BC009941|CCDC102A|92922|coiled-coil domain containing 102A##NM_033212|CCDC102A|92922|coiled-coil domain containing 102A##AK303661|GPR114|221188|G protein-coupled receptor 114##AK292783|GPR114|221188|G protein-coupled receptor 114##AK160368|GPR114|221188|G protein-coupled receptor 114##AY358447|GPR114|221188|G protein-coupled receptor 114##AK301357|GPR114|221188|G protein-coupled receptor 114	0.010941	
chr9	82570368	82570465	reg1021748.p1	6.161	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	-382731	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	-382892	+	TSC_hg19_v1_chr9_+_82186879 NM_007005	-383530	+	BC010100 NM_005077	1733179	-	TSC_hg19_v1_chr9_-_84304463 AB209854	1734011	-	NM_001145197 AK125847 AK308327	1972955	+	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC010100|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_005077|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##AB209854|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4##AK125847|FAM75D4|389761|family with sequence similarity 75, member D4##AK308327|FAM75D4|389761|family with sequence similarity 75, member D4	0.977476	CTCF.p2:-6:0.977
chr10	31607218	31607398	reg1022505.p1	6.160	+	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	-286487	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	-318856	-	AF139543 BC066294 NM_183058	-688673	-	TSC_hg19_v1_chr10_+_31607451 BX647794	128	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	649	-	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	825	+	BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1	0.0	
chr1	108815473	108815598	reg1022539.p1	6.160	+	BC125161 BC125162 AK057395 AK316438 AK302318 NM_001143989	-28853	-	TSC_hg19_v1_chr1_+_108742987 AK130480	-72526	+	TSC_hg19_v1_chr1_-_108742975 AK304165 NM_013386	-72550	-	NM_001143987 NM_001143988 BC125161 BC125162	177387	+	BC127898 BC150530 NM_001010883 BC140863 BC140865	287507	+	BC088366 TSC_hg19_v1_chr1_-_109203698 NM_001102592 BC012198	388233	-	BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4##NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK304165|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_013386|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_001143987|NBPF6|653149|neuroblastoma breakpoint family, member 6##NM_001143988|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##BC127898|FAM102B|284611|family with sequence similarity 102, member B##BC150530|FAM102B|284611|family with sequence similarity 102, member B##NM_001010883|FAM102B|284611|family with sequence similarity 102, member B##BC140863|FAM102B|284611|family with sequence similarity 102, member B##BC140865|FAM102B|284611|family with sequence similarity 102, member B##BC088366|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_001102592|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##BC012198|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)	0.920076	CTCF.p2:10:0.920
chr12	109125424	109125536	reg1023181.p1	6.160	+	TSC_hg19_v1_chr12_-_109125295 AK023205 AK223073 AK304839 AK311315 AK316065 AB030656 NM_014325	-188	-	TSC_hg19_v1_chr12_-_109125284 BC002342 AB209909	-200	-	TSC_hg19_v1_chr12_-_109125268 AL162070 AK297463	-217	-	AK095421 NM_001161331	95846	-	AB072355 AB072356 TSC_hg19_v1_chr12_-_109251307	125810	-	TSC_hg19_v1_chr12_-_109251360 BC062341 NM_001161330 NM_018984	125942	-	AK023205|CORO1C|23603|coronin, actin binding protein, 1C##AK223073|CORO1C|23603|coronin, actin binding protein, 1C##AK304839|CORO1C|23603|coronin, actin binding protein, 1C##AK311315|CORO1C|23603|coronin, actin binding protein, 1C##AK316065|CORO1C|23603|coronin, actin binding protein, 1C##AB030656|CORO1C|23603|coronin, actin binding protein, 1C##NM_014325|CORO1C|23603|coronin, actin binding protein, 1C##BC002342|CORO1C|23603|coronin, actin binding protein, 1C##AB209909|CORO1C|23603|coronin, actin binding protein, 1C##AL162070|CORO1C|23603|coronin, actin binding protein, 1C##AK297463|CORO1C|23603|coronin, actin binding protein, 1C##AK095421|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161331|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072355|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072356|SSH1|54434|slingshot homolog 1 (Drosophila)##BC062341|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161330|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_018984|SSH1|54434|slingshot homolog 1 (Drosophila)	0.0	
chr3	186327404	186327491	reg1023050.p2	6.160	+	TSC_hg19_v1_chr3_+_186288498 AF277317 AK075300 BC001144 AB028859 AY359043 AF228505 AJ250137 DQ890601 DQ893869 AB463574 BT007063 CR457096	-38855	+	AK301292 TSC_hg19_v1_chr3_+_186288479 NM_016306 AK075430	-38977	+	NM_001134415	-39116	-	AK303754 TSC_hg19_v1_chr3_+_186330817	3321	+	TSC_hg19_v1_chr3_+_186330850 NM_001622 AK298447 AK312969 AK292751	3402	+	TSC_hg19_v1_chr3_+_186330872 BC048198 BC052590 M16961 AB527879 CU690918 D67012	3497	+	AF277317|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##AK075300|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##BC001144|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##AB028859|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##AY359043|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##AF228505|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##AJ250137|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##DQ890601|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##DQ893869|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##BT007063|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##CR457096|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##AK301292|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##NM_016306|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##AK075430|DNAJB11|51726|DnaJ (Hsp40) homolog, subfamily B, member 11##NM_001134415|TBCCD1|55171|TBCC domain containing 1##AK303754|AHSG|197|alpha-2-HS-glycoprotein##NM_001622|AHSG|197|alpha-2-HS-glycoprotein##AK298447|AHSG|197|alpha-2-HS-glycoprotein##AK312969|AHSG|197|alpha-2-HS-glycoprotein##AK292751|AHSG|197|alpha-2-HS-glycoprotein##BC048198|AHSG|197|alpha-2-HS-glycoprotein##BC052590|AHSG|197|alpha-2-HS-glycoprotein##M16961|AHSG|197|alpha-2-HS-glycoprotein##D67012|AHSG|197|alpha-2-HS-glycoprotein	1.012055	CTCF.p2:0:0.987
chr9	5715231	5715378	reg1026453.p1	6.160	+	BC036853 TSC_hg19_v1_chr9_-_5630098	-85214	-	TSC_hg19_v1_chr9_+_5629121 NM_001135920 NM_001206557 NM_020829	-86177	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	-204641	+	AL834191 AB058718 TSC_hg19_v1_chr9_-_5833045 BC136771 BC136773 BC144404	117647	-	TSC_hg19_v1_chr9_-_5833067 AK127218	117763	-	TSC_hg19_v1_chr9_-_5833082 NM_024896	117774	-	BC036853|C9orf46|55848|chromosome 9 open reading frame 46##NM_001135920|KIAA1432|57589|KIAA1432##NM_001206557|KIAA1432|57589|KIAA1432##NM_020829|KIAA1432|57589|KIAA1432##AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2##AL834191|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AB058718|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136771|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136773|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC144404|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AK127218|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##NM_024896|ERMP1|79956|endoplasmic reticulum metallopeptidase 1	0.99205	CTCF.p2:-7:0.992
chrUn_gl000222	110382	110488	reg1020586.p1	6.160	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.996146	CTCF.p2:-8:0.996
chr2	241535199	241535335	reg1023366.p1	6.159	+	TSC_hg19_v1_chr2_+_241526150 NM_023083 NM_023085 AK300279 AF089088 AK074807 BC004260 BC007553 AF089095 AB058748 AF089090 AF089091 AF089092 AF089093 AF089094 AF089096 AB590370 DQ893519 DQ896503	-9038	+	BC082975 TSC_hg19_v1_chr2_+_241508114	-27159	+	TSC_hg19_v1_chr2_+_241507945 NM_018226	-27302	+	TSC_hg19_v1_chr2_+_241544846 NM_001195381 NM_001195382 AK172786 AK290256	9573	+	AK314002 NM_005301	29394	+	BC157895 BC171912 BC139748 NM_001102467 BC041460	87048	-	NM_023083|CAPN10|11132|calpain 10##NM_023085|CAPN10|11132|calpain 10##AK300279|CAPN10|11132|calpain 10##AF089088|CAPN10|11132|calpain 10##AK074807|CAPN10|11132|calpain 10##BC004260|CAPN10|11132|calpain 10##BC007553|CAPN10|11132|calpain 10##AB058748|CAPN10|11132|calpain 10##AF089090|CAPN10|11132|calpain 10##AF089091|CAPN10|11132|calpain 10##AF089092|CAPN10|11132|calpain 10##AF089093|CAPN10|11132|calpain 10##AF089094|CAPN10|11132|calpain 10##AF089096|CAPN10|11132|calpain 10##DQ893519|CAPN10|11132|calpain 10##DQ896503|CAPN10|11132|calpain 10##BC082975|RNPEPL1|57140|arginyl aminopeptidase (aminopeptidase B)-like 1##NM_018226|RNPEPL1|57140|arginyl aminopeptidase (aminopeptidase B)-like 1##NM_001195381|GPR35|2859|G protein-coupled receptor 35##NM_001195382|GPR35|2859|G protein-coupled receptor 35##AK172786|GPR35|2859|G protein-coupled receptor 35##AK290256|GPR35|2859|G protein-coupled receptor 35##AK314002|GPR35|2859|G protein-coupled receptor 35##NM_005301|GPR35|2859|G protein-coupled receptor 35##BC157895|AQP12B|653437|aquaporin 12B##BC171912|AQP12B|653437|aquaporin 12B##BC139748|AQP12B|653437|aquaporin 12B##NM_001102467|AQP12B|653437|aquaporin 12B##BC041460|AQP12B|653437|aquaporin 12B	0.014131	
chr9	119257436	119257590	reg1023217.p2	6.159	+	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	-341443	+	AB022761 NM_017418	-1353417	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-1377040	-	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	191949	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	192093	+	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	919800	-	NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2	0.997043	CTCF.p2:-8:0.997
chr17	42432030	42432167	reg1027027.p1	6.158	+	TSC_hg19_v1_chr17_+_42422669 AK000607 AK222522 AK296090 X62320 AK303830	-9422	+	TSC_hg19_v1_chr17_+_42422640 AF055008	-9461	+	BC000324 NM_002087 TSC_hg19_v1_chr17_+_42422623	-9542	+	TSC_hg19_v1_chr17_-_42441222 BC030200 NM_198475	9124	-	AB528003 J02764 BC117443 BC126442 AK297155 AK315335 M34480 NM_000419	34758	-	TSC_hg19_v1_chr17_-_42580760 BC136629 BC144323 AK025600 BC140010	148666	-	AK000607|GRN|2896|granulin##AK222522|GRN|2896|granulin##AK296090|GRN|2896|granulin##X62320|GRN|2896|granulin##AK303830|GRN|2896|granulin##AF055008|GRN|2896|granulin##BC000324|GRN|2896|granulin##NM_002087|GRN|2896|granulin##BC030200|FAM171A2|284069|family with sequence similarity 171, member A2##NM_198475|FAM171A2|284069|family with sequence similarity 171, member A2##J02764|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC117443|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC126442|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK297155|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK315335|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##M34480|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##NM_000419|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC136629|GPATCH8|23131|G patch domain containing 8##BC144323|GPATCH8|23131|G patch domain containing 8##AK025600|GPATCH8|23131|G patch domain containing 8##BC140010|GPATCH8|23131|G patch domain containing 8	0.998232	CTCF.p2:20:0.998
chr10	107935636	107935752	reg1020964.p1	6.157	+	BC117417 TSC_hg19_v1_chr10_+_106401047	-1534649	+	AB028982 NM_014978	-1534836	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-1822153	+	TSC_hg19_v1_chr10_-_108459000 AK123752	523365	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	988682	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	3747515	-	BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.994453	CTCF.p2:37:0.994
chr17	50460980	50461114	reg1023438.p1	6.157	+	BC029865 TSC_hg19_v1_chr17_-_50237384 AF288385 NM_001082534	-223684	-	NM_001082533	-223887	-	AB036836 TSC_hg19_v1_chr17_-_50236965	-224083	-	NM_001243552	601832	+	NM_032559 AK057272 AF333335 BC033802 AK302262 AK308265 CU689754	1439268	+	TSC_hg19_v1_chr17_+_52978217 NM_005486 AK001893 AK309164 AK225351 AJ010071 AK303912 AK300823 AK303913 AK315039 AK315907 AK223125 BC029396 AB590855	2517109	+	BC029865|CA10|56934|carbonic anhydrase X##AF288385|CA10|56934|carbonic anhydrase X##NM_001082534|CA10|56934|carbonic anhydrase X##NM_001082533|CA10|56934|carbonic anhydrase X##AB036836|CA10|56934|carbonic anhydrase X##NM_001243552|LOC100506650|100506650|uncharacterized LOC100506650##NM_032559|KIF2B|84643|kinesin family member 2B##AK057272|KIF2B|84643|kinesin family member 2B##AF333335|KIF2B|84643|kinesin family member 2B##BC033802|KIF2B|84643|kinesin family member 2B##AK302262|KIF2B|84643|kinesin family member 2B##NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1##AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1##AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1##AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1##AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1##AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1##AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1##BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1	0.999904	CTCF.p2:15:1.000
chr2	233965433	233965613	reg1021933.p2	6.157	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-40407	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-40464	+	BC069151 BC107053 NM_005383	-68142	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	194743	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	194800	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	194834	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.026564	
chr3	93953180	93953288	reg1021632.p2	6.157	+	AK122674 NM_001195643	-171168	-	TSC_hg19_v1_chr3_+_93781863 AF169972 BC018432 BC020602 BC057238 NM_022072 AK026262	-171390	+	BC045541 TSC_hg19_v1_chr3_-_93781761 AL832912 BC063379 NM_176815	-171490	-	NM_001080448 TSC_hg19_v1_chr3_+_96533435 AK092565 AX747601	2580196	+	AK302040 AK310249 BC031881 BC067287 AK302080 AL133666 NM_173655	3205237	+	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	3530366	+	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1##AF169972|NSUN3|63899|NOP2/Sun domain family, member 3##BC018432|NSUN3|63899|NOP2/Sun domain family, member 3##BC020602|NSUN3|63899|NOP2/Sun domain family, member 3##BC057238|NSUN3|63899|NOP2/Sun domain family, member 3##NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3##AK026262|NSUN3|63899|NOP2/Sun domain family, member 3##BC045541|DHFRL1|200895|dihydrofolate reductase-like 1##AL832912|DHFRL1|200895|dihydrofolate reductase-like 1##BC063379|DHFRL1|200895|dihydrofolate reductase-like 1##NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001080448|EPHA6|285220|EPH receptor A6##AK092565|EPHA6|285220|EPH receptor A6##AK302040|EPHA6|285220|EPH receptor A6##AK310249|EPHA6|285220|EPH receptor A6##BC031881|EPHA6|285220|EPH receptor A6##BC067287|EPHA6|285220|EPH receptor A6##AK302080|EPHA6|285220|EPH receptor A6##AL133666|EPHA6|285220|EPH receptor A6##NM_173655|EPHA6|285220|EPH receptor A6##BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6	0.942764	CTCF.p2:-8:0.943
chr8	29265936	29266098	reg1020075.p1	6.157	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-57947	-	AL137704 NM_057158	-59696	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-145403	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	674457	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	674555	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	686926	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chrX	38523683	38523818	reg1025923.p1	6.157	+	TSC_hg19_v1_chrX_+_38420794 NM_004615 AB062057 L10373 BC018036 AK293534 AK293178 AK293552 AK312343 D10653 CU676142 DQ892093 DQ895571 D29808 AB102665	-102998	+	BC107153 BC107154 NM_000531 BC114496 AK292757 K02100 BC074745	-311926	+	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	-336955	-	TSC_hg19_v1_chrX_+_38660678 NM_001098790 NM_001098791	136918	+	TSC_hg19_v1_chrX_+_38660711 BC019332	136956	+	BC008908 NM_021242	139322	+	NM_004615|TSPAN7|7102|tetraspanin 7##AB062057|TSPAN7|7102|tetraspanin 7##L10373|TSPAN7|7102|tetraspanin 7##BC018036|TSPAN7|7102|tetraspanin 7##AK293534|TSPAN7|7102|tetraspanin 7##AK293178|TSPAN7|7102|tetraspanin 7##AK293552|TSPAN7|7102|tetraspanin 7##AK312343|TSPAN7|7102|tetraspanin 7##D10653|TSPAN7|7102|tetraspanin 7##DQ892093|TSPAN7|7102|tetraspanin 7##DQ895571|TSPAN7|7102|tetraspanin 7##D29808|TSPAN7|7102|tetraspanin 7##AB102665|TSPAN7|7102|tetraspanin 7##BC107153|OTC|5009|ornithine carbamoyltransferase##BC107154|OTC|5009|ornithine carbamoyltransferase##NM_000531|OTC|5009|ornithine carbamoyltransferase##BC114496|OTC|5009|ornithine carbamoyltransferase##AK292757|OTC|5009|ornithine carbamoyltransferase##K02100|OTC|5009|ornithine carbamoyltransferase##BC074745|OTC|5009|ornithine carbamoyltransferase##DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001098790|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_001098791|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC019332|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))	0.543311	CTCF.p2:-7:0.543
chr11	86630744	86630875	reg1021490.p1	6.156	+	NM_007173 TSC_hg19_v1_chr11_+_86511583 AK316508 AK075362 AK315562 AK304301 AK304054 BC063022 AL136914 BC001278 AF015287 AF193611 AY359033	-119257	+	TSC_hg19_v1_chr11_-_86383659 AK300974 NM_001161586	-247144	-	X79440 TSC_hg19_v1_chr11_-_86383470 NM_006680 AK313695	-247367	-	TSC_hg19_v1_chr11_-_86666094 AY462097	35298	-	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	35579	-	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	118169	+	NM_007173|PRSS23|11098|protease, serine, 23##AK075362|PRSS23|11098|protease, serine, 23##AK315562|PRSS23|11098|protease, serine, 23##AK304301|PRSS23|11098|protease, serine, 23##AK304054|PRSS23|11098|protease, serine, 23##AL136914|PRSS23|11098|protease, serine, 23##BC001278|PRSS23|11098|protease, serine, 23##AF015287|PRSS23|11098|protease, serine, 23##AF193611|PRSS23|11098|protease, serine, 23##AY359033|PRSS23|11098|protease, serine, 23##AK300974|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001161586|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##X79440|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_006680|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK313695|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AY462097|FZD4|8322|frizzled family receptor 4##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135	0.744337	CTCF.p2:9:0.744
chr11_gl000202_random	12887	12984	reg1020251.p1	6.156	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.99719	CTCF.p2:10:0.997
chr12	22837612	22837758	reg1023307.p1	6.156	+	TSC_hg19_v1_chr12_+_22778130 CU688188 BC006111 AL137750 AK074425	-59538	+	AF207600 TSC_hg19_v1_chr12_+_22778077 BC066907 NM_001039481 NM_018638	-59642	+	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	-140219	-	NM_178010 AK098610 AK223536	899841	-	AK074317 TSC_hg19_v1_chr12_-_24102605 BC065532 AB081589 NM_006940	1264917	-	TSC_hg19_v1_chr12_-_24103855 AK299607 AK096569	1266169	-	BC006111|ETNK1|55500|ethanolamine kinase 1##AL137750|ETNK1|55500|ethanolamine kinase 1##AK074425|ETNK1|55500|ethanolamine kinase 1##AF207600|ETNK1|55500|ethanolamine kinase 1##BC066907|ETNK1|55500|ethanolamine kinase 1##NM_001039481|ETNK1|55500|ethanolamine kinase 1##NM_018638|ETNK1|55500|ethanolamine kinase 1##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528##NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5##AK098610|SOX5|6660|SRY (sex determining region Y)-box 5##AK223536|SOX5|6660|SRY (sex determining region Y)-box 5##AK074317|SOX5|6660|SRY (sex determining region Y)-box 5##BC065532|SOX5|6660|SRY (sex determining region Y)-box 5##AB081589|SOX5|6660|SRY (sex determining region Y)-box 5##NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5##AK299607|SOX5|6660|SRY (sex determining region Y)-box 5##AK096569|SOX5|6660|SRY (sex determining region Y)-box 5	0.976099	CTCF.p2:-8:0.976
chr13	91837685	91837781	reg1022219.p2	6.156	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3512864	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5464294	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7381233	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	213171	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	2041694	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3294093	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.194241	
chr16	11296615	11296795	reg1021824.p2	6.156	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-258262	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-260470	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-260539	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	53345	-	X63758 BC096135 BC096136 BC096137 NM_005425	66433	-	NM_021247	70746	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr12	123921109	123921259	reg1022394.p2	6.155	+	CU680478 DQ892579 DQ895796 TSC_hg19_v1_chr12_-_123921017 AB085763 BC013042	-172	-	AY064546 TSC_hg19_v1_chr12_+_123873657	-47555	+	TSC_hg19_v1_chr12_+_123868724 AY102937 AB464199	-52461	+	TSC_hg19_v1_chr12_-_123921232 AK056934 NM_145058	57	-	NM_022717 AK290127 TSC_hg19_v1_chr12_+_123942685 BC047678 BC020829 U44799 BC054034	21519	+	BC093671 BC111955 NM_180699	23201	+	DQ892579|RILPL2|196383|Rab interacting lysosomal protein-like 2##DQ895796|RILPL2|196383|Rab interacting lysosomal protein-like 2##AB085763|RILPL2|196383|Rab interacting lysosomal protein-like 2##BC013042|RILPL2|196383|Rab interacting lysosomal protein-like 2##AY064546|SETD8|387893|SET domain containing (lysine methyltransferase) 8##AY102937|SETD8|387893|SET domain containing (lysine methyltransferase) 8##AK056934|RILPL2|196383|Rab interacting lysosomal protein-like 2##NM_145058|RILPL2|196383|Rab interacting lysosomal protein-like 2##NM_022717|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##AK290127|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC047678|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##U44799|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC054034|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC093671|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC111955|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##NM_180699|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)	0.0	
chr22	23632801	23632905	reg1021402.p2	6.155	+	TSC_hg19_v1_chr22_+_23540316 X14677 X14675	-92448	+	TSC_hg19_v1_chr22_+_23523013 X06418 EU216058 EU216059 EU216061 EU216062 EU216063 EU216064 EU216065 EU216067 EU216068 EU216069 EU216070 EU216072	-109804	+	TSC_hg19_v1_chr22_+_23522745 AB209991	-110053	+	TSC_hg19_v1_chr22_-_23744738 AK056130 AK092581 AX747609 AK092530 AX747585	111890	-	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	289582	-	BC056888 AL080197 BC063390 AK310349 NM_016449	341643	-	X06418|BCR|613|breakpoint cluster region##EU216058|BCR|613|breakpoint cluster region##EU216059|BCR|613|breakpoint cluster region##EU216061|BCR|613|breakpoint cluster region##EU216062|BCR|613|breakpoint cluster region##EU216063|BCR|613|breakpoint cluster region##EU216064|BCR|613|breakpoint cluster region##EU216067|BCR|613|breakpoint cluster region##EU216069|BCR|613|breakpoint cluster region##EU216070|BCR|613|breakpoint cluster region##AB209991|BCR|613|breakpoint cluster region##AK056130|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092581|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092530|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43	0.927393	CTCF.p2:-5:0.927
chr8	133491006	133491124	reg1020934.p1	6.155	+	AK296293 NM_001204824	-31557	-	NM_001145095	-373554	-	AK297911 NM_001080399	-419439	-	AB208890 AF033347 TSC_hg19_v1_chr8_-_133492689	1558	-	TSC_hg19_v1_chr8_-_133492751 AB527350 BC128576	1722	-	NM_004519 TSC_hg19_v1_chr8_-_133493146	2012	-	AK296293|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##NM_001204824|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##NM_001145095|HHLA1|10086|HERV-H LTR-associating 1##AK297911|OC90|729330|otoconin 90##NM_001080399|OC90|729330|otoconin 90##AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##NM_004519|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3	0.975194	CTCF.p2:2:0.975
chrX	68313945	68314067	reg1022237.p1	6.155	+	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	-265151	+	TSC_hg19_v1_chrX_+_67913490 D80011	-400515	+	TSC_hg19_v1_chrX_+_67913480 AK291747 NM_001142504	-400526	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	71300	-	AF087142 NM_015686 BC136518 BC136519	411077	+	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	521929	+	BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK291747|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142504|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B##AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A	0.995855	CTCF.p2:-11:0.996
chr18	71863476	71863631	reg1002194.p1	6.154	+	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	-47759	+	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	-48526	-	AF448838 BC050329 NM_001201465 NM_138966	-1328744	-	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	95626	-	CR749350 NM_001174123	119556	+	TSC_hg19_v1_chr18_-_72124545 NM_001044369	260976	-	NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15##AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)##CR749350|C18orf63|644041|chromosome 18 open reading frame 63##NM_001174123|C18orf63|644041|chromosome 18 open reading frame 63##NM_001044369|FAM69C|125704|family with sequence similarity 69, member C	0.015884	
chr21	33942202	33942327	reg1023802.p2	6.154	+	AY358787 NM_058187	-157513	+	TSC_hg19_v1_chr21_+_33765423 BC007928 AK026376	-176827	+	AF231919 TSC_hg19_v1_chr21_-_33765328 NM_014825	-177008	-	AK223529 AF115967 BC022024 BC033855 AK058078 NM_144659	15531	-	DQ655907 DQ655908 TSC_hg19_v1_chr21_-_33984495 CU674350 DQ656039	42258	-	TSC_hg19_v1_chr21_-_33984683 AF282851 BC000709	42414	-	AY358787|C21orf63|59271|chromosome 21 open reading frame 63##NM_058187|C21orf63|59271|chromosome 21 open reading frame 63##BC007928|C21orf119|84996|chromosome 21 open reading frame 119##AK026376|C21orf119|84996|chromosome 21 open reading frame 119##AF231919|URB1|9875|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)##NM_014825|URB1|9875|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)##AK223529|TCP10L|140290|t-complex 10 (mouse)-like##AF115967|TCP10L|140290|t-complex 10 (mouse)-like##BC022024|TCP10L|140290|t-complex 10 (mouse)-like##BC033855|TCP10L|140290|t-complex 10 (mouse)-like##AK058078|TCP10L|140290|t-complex 10 (mouse)-like##NM_144659|TCP10L|140290|t-complex 10 (mouse)-like##DQ655907|C21orf59|56683|chromosome 21 open reading frame 59##DQ655908|C21orf59|56683|chromosome 21 open reading frame 59##DQ656039|C21orf59|56683|chromosome 21 open reading frame 59##AF282851|C21orf59|56683|chromosome 21 open reading frame 59##BC000709|C21orf59|56683|chromosome 21 open reading frame 59	0.050088	
chr2	38487654	38487834	reg1023733.p2	6.153	+	TSC_hg19_v1_chr2_-_38303315 AK312686 NM_000104	-184424	-	U03688 BC012049 TSC_hg19_v1_chr2_-_38303294 AK297039 AK303862	-184462	-	NM_001170793 NM_144713 AK057516 AF435956	-310144	+	AK316179 TSC_hg19_v1_chr2_-_38525609	37825	-	TSC_hg19_v1_chr2_-_38604411 BC053508 AK026946 AK225190 AK303985 AK308894	116660	-	TSC_hg19_v1_chr2_-_38604430 NM_001135673 NM_022374	116687	-	AK312686|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_000104|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##U03688|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##BC012049|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK303862|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1##AK316179|ATL2|64225|atlastin GTPase 2##BC053508|ATL2|64225|atlastin GTPase 2##AK026946|ATL2|64225|atlastin GTPase 2##AK225190|ATL2|64225|atlastin GTPase 2##AK303985|ATL2|64225|atlastin GTPase 2##AK308894|ATL2|64225|atlastin GTPase 2##NM_001135673|ATL2|64225|atlastin GTPase 2##NM_022374|ATL2|64225|atlastin GTPase 2	0.168518	
chrX	69672008	69672135	reg1024058.p1	6.153	+	AB209328 NM_021120 AK315041 U49089	-7310	+	NM_001171191 NM_001171192 NM_001171193 NM_017711 AB048363 AK299255 AK310090 AK301025 AK316035 AK000214 AK307778 BC032009 AY358986	-29039	+	NM_012310 AK313133 BC003664 BC038459 AF071592 BC049218 AB208797 BC050548 BC011801	-162140	+	TSC_hg19_v1_chrX_+_69672143 AB033058 NM_020730	104	+	TSC_hg19_v1_chrX_+_69672415 AK304020 AK316518	335	+	TSC_hg19_v1_chrX_+_69674948 AK303377 NM_001166278	2863	+	AB209328|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_021120|DLG3|1741|discs, large homolog 3 (Drosophila)##AK315041|DLG3|1741|discs, large homolog 3 (Drosophila)##U49089|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_001171191|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##NM_001171192|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##NM_001171193|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##NM_017711|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AB048363|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AK299255|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AK310090|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AK301025|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AK316035|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AK000214|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AK307778|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##BC032009|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##AY358986|GDPD2|54857|glycerophosphodiester phosphodiesterase domain containing 2##NM_012310|KIF4A|24137|kinesin family member 4A##AK313133|KIF4A|24137|kinesin family member 4A##BC003664|KIF4A|24137|kinesin family member 4A##BC038459|KIF4A|24137|kinesin family member 4A##AF071592|KIF4A|24137|kinesin family member 4A##BC049218|KIF4A|24137|kinesin family member 4A##AB208797|KIF4A|24137|kinesin family member 4A##BC050548|KIF4A|24137|kinesin family member 4A##BC011801|KIF4A|24137|kinesin family member 4A##AB033058|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_020730|DLG3|1741|discs, large homolog 3 (Drosophila)##AK304020|DLG3|1741|discs, large homolog 3 (Drosophila)##AK316518|DLG3|1741|discs, large homolog 3 (Drosophila)##AK303377|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_001166278|DLG3|1741|discs, large homolog 3 (Drosophila)	0.0	
chr12	53661812	53661983	reg1020762.p1	6.152	+	TSC_hg19_v1_chr12_+_53646007 AK225998	-15901	+	TSC_hg19_v1_chr12_+_53645948 AY358604 BC067795 BX640649	-15954	+	TSC_hg19_v1_chr12_+_53645885 NM_032889 AK074684	-16017	+	TSC_hg19_v1_chr12_+_53662054 NM_012291 D79987	182	+	NM_002624 NM_145897 TSC_hg19_v1_chr12_+_53689331 BC003373 AB055803 AB055804 AB055805 AK024094 AK292623 BC062671	27391	+	AB527693 CU687580 BT007195 TSC_hg19_v1_chr12_+_53689361	27459	+	AK225998|MFSD5|84975|major facilitator superfamily domain containing 5##AY358604|MFSD5|84975|major facilitator superfamily domain containing 5##BC067795|MFSD5|84975|major facilitator superfamily domain containing 5##BX640649|MFSD5|84975|major facilitator superfamily domain containing 5##NM_032889|MFSD5|84975|major facilitator superfamily domain containing 5##AK074684|MFSD5|84975|major facilitator superfamily domain containing 5##NM_012291|ESPL1|9700|extra spindle pole bodies homolog 1 (S. cerevisiae)##D79987|ESPL1|9700|extra spindle pole bodies homolog 1 (S. cerevisiae)##NM_002624|PFDN5|5204|prefoldin subunit 5##NM_145897|PFDN5|5204|prefoldin subunit 5##BC003373|PFDN5|5204|prefoldin subunit 5##AB055803|PFDN5|5204|prefoldin subunit 5##AB055804|PFDN5|5204|prefoldin subunit 5##AB055805|PFDN5|5204|prefoldin subunit 5##AK024094|PFDN5|5204|prefoldin subunit 5##AK292623|PFDN5|5204|prefoldin subunit 5##BC062671|PFDN5|5204|prefoldin subunit 5##BT007195|PFDN5|5204|prefoldin subunit 5	0.029485	
chr6	37533509	37533665	reg1001168.p1	6.152	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-65891	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-65935	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-130150	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	132119	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	253703	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	254103	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.012701	
chr3	160992621	160992754	reg1024347.p2	6.151	+	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-53566	+	AK225664 TSC_hg19_v1_chr3_+_160939097	-53591	+	AB050856 NM_033169 TSC_hg19_v1_chr3_-_160823138 AY359049 BC047618 AK223439 BC028571 AF154848 AK022491 AK095917 NM_001038628 NM_003781 NM_033167 NM_033168	-169750	-	AF458592 BC037817 NM_001040100	97121	-	NM_001080440	221908	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	3803591	-	AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK225664|NMD3|51068|NMD3 homolog (S. cerevisiae)##AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001080440|OTOL1|131149|otolin 1##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)	0.937036	CTCF.p2:-9:0.937
chr7	2243568	2243730	reg1022632.p2	6.151	+	TSC_hg19_v1_chr7_-_1980177 BC018870	-263486	-	NM_001128636	-494852	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-633828	+	AK310481 TSC_hg19_v1_chr7_-_2272542	28886	-	TSC_hg19_v1_chr7_-_2272559 AF083811	28911	-	TSC_hg19_v1_chr7_-_2272581 AK090959 AK310831 AK314227 AX746704 NM_001013836 NM_001013837 NM_003550	28931	-	BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AF083811|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK090959|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310831|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK314227|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013836|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013837|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_003550|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.0	
chr14	93017881	93018049	reg1022832.p2	6.150	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-38006	+	NM_153646 AF520704 AF520705 BC069653	-227789	+	AK295059 NM_153647	-228429	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	100671	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	100858	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	196994	-	AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain	0.0	
chr5	122040070	122040195	reg1023310.p1	6.150	+	BC029465 TSC_hg19_v1_chr5_-_121814783	-225349	-	TSC_hg19_v1_chr5_+_121647890 DQ227317 NM_001242935 NM_005460 BC094759 BC040552 AK304646 AK310835 AF076929 BC033743	-392274	+	AK299687 TSC_hg19_v1_chr5_+_121647434	-392720	+	TSC_hg19_v1_chr5_+_122110737 AK023716 NM_003100	70612	+	AK023581 TSC_hg19_v1_chr5_+_122110776 BC003382 AF065482 AK222968	70637	+	TSC_hg19_v1_chr5_+_122110786 AY272044 AK002170 AB464236 BT009841 DQ890933 DQ894096 AF043453	70680	+	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein##NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein##NM_005460|SNCAIP|9627|synuclein, alpha interacting protein##BC094759|SNCAIP|9627|synuclein, alpha interacting protein##BC040552|SNCAIP|9627|synuclein, alpha interacting protein##AK304646|SNCAIP|9627|synuclein, alpha interacting protein##AK310835|SNCAIP|9627|synuclein, alpha interacting protein##AF076929|SNCAIP|9627|synuclein, alpha interacting protein##BC033743|SNCAIP|9627|synuclein, alpha interacting protein##AK299687|SNCAIP|9627|synuclein, alpha interacting protein##AK023716|SNX2|6643|sorting nexin 2##NM_003100|SNX2|6643|sorting nexin 2##AK023581|SNX2|6643|sorting nexin 2##BC003382|SNX2|6643|sorting nexin 2##AF065482|SNX2|6643|sorting nexin 2##AK222968|SNX2|6643|sorting nexin 2##AY272044|SNX2|6643|sorting nexin 2##AK002170|SNX2|6643|sorting nexin 2##BT009841|SNX2|6643|sorting nexin 2##DQ890933|SNX2|6643|sorting nexin 2##DQ894096|SNX2|6643|sorting nexin 2##AF043453|SNX2|6643|sorting nexin 2	0.022127	
chrX	117981697	117981878	reg1023985.p1	6.150	+	TSC_hg19_v1_chrX_+_117957786 AK122676 BC036572 BC031241 BC057841 NM_173798 BC018066	-23965	+	TSC_hg19_v1_chrX_+_117861562 BC015768 NM_001560 Y10659 U81379 U81380 AK313467 Y09328 BC009960 AB528371 DQ893454 DQ896296 AB209849	-120220	+	AY692226 NM_144658 TSC_hg19_v1_chrX_+_117629874	-351915	+	TSC_hg19_v1_chrX_+_118108580 AK091777 AK290198 AX747177	126793	+	TSC_hg19_v1_chrX_+_118108607 BC098283 BC099847 BC100671 BC103491 NM_001031855 NM_024778	126866	+	TSC_hg19_v1_chrX_+_118109314 AK026265	127551	+	AK122676|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC036572|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC031241|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC057841|ZCCHC12|170261|zinc finger, CCHC domain containing 12##NM_173798|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC018066|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC015768|IL13RA1|3597|interleukin 13 receptor, alpha 1##NM_001560|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y10659|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81379|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81380|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK313467|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y09328|IL13RA1|3597|interleukin 13 receptor, alpha 1##BC009960|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ893454|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ896296|IL13RA1|3597|interleukin 13 receptor, alpha 1##AB209849|IL13RA1|3597|interleukin 13 receptor, alpha 1##AY692226|DOCK11|139818|dedicator of cytokinesis 11##NM_144658|DOCK11|139818|dedicator of cytokinesis 11##AK091777|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK290198|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC098283|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC099847|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC100671|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC103491|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_001031855|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_024778|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK026265|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3	0.975873	CTCF.p2:-14:0.976
chr12	8231105	8231210	reg1023238.p2	6.149	+	TSC_hg19_v1_chr12_-_8219032 U62027	-12141	-	TSC_hg19_v1_chr12_-_8218956 U28488 AK290242 AK312458 BC020742 NM_004054 AK223388	-12204	-	TSC_hg19_v1_chr12_+_8185313 BC032608 NM_018416	-45667	+	TSC_hg19_v1_chr12_+_8234872 NM_015509 AK074880 AK074858 AK074923 AK303675 AK314424 BC110876 AL050272 AK290537 BC002888	3694	+	AF067800 NM_016184 NM_194447 NM_194448 NM_194450 AJ133532 AF328684 BC117439 BC117441 AF109146 BC074822 BC074874 AF200738 HQ258754 EU196761	45210	+	NM_001004328	93992	+	U62027|C3AR1|719|complement component 3a receptor 1##U28488|C3AR1|719|complement component 3a receptor 1##AK290242|C3AR1|719|complement component 3a receptor 1##AK312458|C3AR1|719|complement component 3a receptor 1##BC020742|C3AR1|719|complement component 3a receptor 1##NM_004054|C3AR1|719|complement component 3a receptor 1##AK223388|C3AR1|719|complement component 3a receptor 1##NM_018416|FOXJ2|55810|forkhead box J2##NM_015509|NECAP1|25977|NECAP endocytosis associated 1##AK074880|NECAP1|25977|NECAP endocytosis associated 1##AK074858|NECAP1|25977|NECAP endocytosis associated 1##AK074923|NECAP1|25977|NECAP endocytosis associated 1##AK303675|NECAP1|25977|NECAP endocytosis associated 1##AK314424|NECAP1|25977|NECAP endocytosis associated 1##BC110876|NECAP1|25977|NECAP endocytosis associated 1##AL050272|NECAP1|25977|NECAP endocytosis associated 1##AK290537|NECAP1|25977|NECAP endocytosis associated 1##BC002888|NECAP1|25977|NECAP endocytosis associated 1##AF067800|CLEC4A|50856|C-type lectin domain family 4, member A##NM_016184|CLEC4A|50856|C-type lectin domain family 4, member A##NM_194447|CLEC4A|50856|C-type lectin domain family 4, member A##NM_194448|CLEC4A|50856|C-type lectin domain family 4, member A##NM_194450|CLEC4A|50856|C-type lectin domain family 4, member A##AJ133532|CLEC4A|50856|C-type lectin domain family 4, member A##AF328684|CLEC4A|50856|C-type lectin domain family 4, member A##BC117439|CLEC4A|50856|C-type lectin domain family 4, member A##BC117441|CLEC4A|50856|C-type lectin domain family 4, member A##AF109146|CLEC4A|50856|C-type lectin domain family 4, member A##BC074822|CLEC4A|50856|C-type lectin domain family 4, member A##BC074874|CLEC4A|50856|C-type lectin domain family 4, member A##AF200738|CLEC4A|50856|C-type lectin domain family 4, member A##HQ258754|CLEC4A|50856|C-type lectin domain family 4, member A##NM_001004328|ZNF705A|440077|zinc finger protein 705A	0.848534	CTCF.p2:11:0.849
chr16	14834999	14835113	reg1023263.p1	6.149	+	BC106731 BC106732 BC111804 NM_003561 U95301	-46579	-	TSC_hg19_v1_chr16_+_14726837 BC003054 AK291114 AK297067	-108213	+	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	-108317	+	TSC_hg19_v1_chr16_+_14927651 NM_014287 BC065535	92587	+	TSC_hg19_v1_chr16_+_14927721 X57398	92704	+	AB528194 AF132984 NM_006985	196243	+	BC106731|PLA2G10|8399|phospholipase A2, group X##BC106732|PLA2G10|8399|phospholipase A2, group X##BC111804|PLA2G10|8399|phospholipase A2, group X##NM_003561|PLA2G10|8399|phospholipase A2, group X##U95301|PLA2G10|8399|phospholipase A2, group X##BC003054|BFAR|51283|bifunctional apoptosis regulator##AK291114|BFAR|51283|bifunctional apoptosis regulator##AK297067|BFAR|51283|bifunctional apoptosis regulator##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator##NM_014287|NOMO1|23420|NODAL modulator 1##BC065535|NOMO1|23420|NODAL modulator 1##X57398|NOMO1|23420|NODAL modulator 1##AF132984|NPIP|9284|nuclear pore complex interacting protein##NM_006985|NPIP|9284|nuclear pore complex interacting protein	0.592787	CTCF.p2:3:0.593
chr9	29692146	29692305	reg1023930.p2	6.149	+	AK056372 NM_152570	-972923	-	AK057806 JN681271 NM_145005	-2118384	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-2118754	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	2692365	+	TSC_hg19_v1_chr9_+_32384622 AK057904	2692402	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	2692424	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.0	
chr2	173037310	173037421	reg1023770.p1	6.148	+	AK291367 AK316129 TSC_hg19_v1_chr2_-_172967629	-69736	-	TSC_hg19_v1_chr2_-_172967234 HQ258018 AB208823 AK297503 BC032558 NM_004405	-70010	-	L07919 TSC_hg19_v1_chr2_-_172967055	-70331	-	AK311695 AK296496 TSC_hg19_v1_chr2_+_173292147	254762	+	TSC_hg19_v1_chr2_+_173292316 NM_000210 NM_001079818 BC007002	254955	+	TSC_hg19_v1_chr2_+_173292395 X53586 BC136455 BC136456 X59512 AB208842	255114	+	AK291367|DLX2|1746|distal-less homeobox 2##AK316129|DLX2|1746|distal-less homeobox 2##HQ258018|DLX2|1746|distal-less homeobox 2##AB208823|DLX2|1746|distal-less homeobox 2##AK297503|DLX2|1746|distal-less homeobox 2##BC032558|DLX2|1746|distal-less homeobox 2##NM_004405|DLX2|1746|distal-less homeobox 2##L07919|DLX2|1746|distal-less homeobox 2##AK311695|ITGA6|3655|integrin, alpha 6##AK296496|ITGA6|3655|integrin, alpha 6##NM_000210|ITGA6|3655|integrin, alpha 6##NM_001079818|ITGA6|3655|integrin, alpha 6##BC007002|ITGA6|3655|integrin, alpha 6##X53586|ITGA6|3655|integrin, alpha 6##BC136455|ITGA6|3655|integrin, alpha 6##BC136456|ITGA6|3655|integrin, alpha 6##X59512|ITGA6|3655|integrin, alpha 6##AB208842|ITGA6|3655|integrin, alpha 6	0.0	
chr5	142609605	142609783	reg1016182.p2	6.148	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-459386	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-459722	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-532123	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	173129	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	173412	-	BC015610 TSC_hg19_v1_chr5_-_142783214	173517	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr12	121022432	121022560	reg1024723.p1	6.147	+	AK223206 TSC_hg19_v1_chr12_-_121019185 AK303144 AF070660 AF117232 AJ306296 BC012505 NM_015918 NM_198202	-3308	-	AK094011 AK097807 TSC_hg19_v1_chr12_+_120972158 AK126274 AK301608 AB027196 BC016622 BC031596 BC101709 BC101715 BC143493 BT006974 CU677651 D87451 DQ890634 DQ893805	-49996	+	TSC_hg19_v1_chr12_+_120972153 NM_014868 AK315558	-50368	+	BC030201 NM_001033677	55925	+	AF169148 AF169149 NM_004276 NM_031205	65874	+	TSC_hg19_v1_chr12_+_121124951 NM_014730	102442	+	AK223206|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK303144|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF070660|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF117232|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AJ306296|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##BC012505|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015918|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_198202|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK094011|RNF10|9921|ring finger protein 10##AK097807|RNF10|9921|ring finger protein 10##AK126274|RNF10|9921|ring finger protein 10##AK301608|RNF10|9921|ring finger protein 10##AB027196|RNF10|9921|ring finger protein 10##BC016622|RNF10|9921|ring finger protein 10##BC031596|RNF10|9921|ring finger protein 10##BC101709|RNF10|9921|ring finger protein 10##BC101715|RNF10|9921|ring finger protein 10##BC143493|RNF10|9921|ring finger protein 10##BT006974|RNF10|9921|ring finger protein 10##D87451|RNF10|9921|ring finger protein 10##DQ890634|RNF10|9921|ring finger protein 10##DQ893805|RNF10|9921|ring finger protein 10##NM_014868|RNF10|9921|ring finger protein 10##AK315558|RNF10|9921|ring finger protein 10##BC030201|CABP1|9478|calcium binding protein 1##NM_001033677|CABP1|9478|calcium binding protein 1##AF169148|CABP1|9478|calcium binding protein 1##AF169149|CABP1|9478|calcium binding protein 1##NM_004276|CABP1|9478|calcium binding protein 1##NM_031205|CABP1|9478|calcium binding protein 1##NM_014730|MLEC|9761|malectin	0.0	
chr2	33620874	33620972	reg1024733.p1	6.147	+	TSC_hg19_v1_chr2_+_33359657 NM_000627 NM_001166264 NM_001166265 NM_001166266 AB208801 BC130289 BC144127 BC144128 M34057 AB384737 AF489528	-261218	+	NM_206943	-448555	+	NM_001193509 NM_017735 AK299196 BC063791 TSC_hg19_v1_chr2_+_32853177 AK027570	-767789	+	AK125551 TSC_hg19_v1_chr2_+_33661417 BC027849 NM_170672 AK292983	40525	+	NM_001139488	80397	+	TSC_hg19_v1_chr2_+_33701715 BX647990	80773	+	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1##AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1##M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1##AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_206943|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001193509|TTC27|55622|tetratricopeptide repeat domain 27##NM_017735|TTC27|55622|tetratricopeptide repeat domain 27##AK299196|TTC27|55622|tetratricopeptide repeat domain 27##BC063791|TTC27|55622|tetratricopeptide repeat domain 27##AK027570|TTC27|55622|tetratricopeptide repeat domain 27##AK125551|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC027849|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_170672|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK292983|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_001139488|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)	0.929397	CTCF.p2:-2:0.929
chr6_dbb_hap3	3678035	3678160	reg1023401.p1	6.147	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.943967	CTCF.p2:-15:0.944
chr1	113157197	113157314	reg1020540.p1	6.146	+	BC141825 NM_024494	-105886	+	AB045116 NM_004185	-147216	+	TSC_hg19_v1_chr1_+_112938871 BC016029 AK022544 AK092791 AX747733	-218387	+	TSC_hg19_v1_chr1_+_113161808 BX648738	4538	+	BC027898 TSC_hg19_v1_chr1_-_113161750 AK021719 CU688054 EU831659 EU831742 AK295507 AK295955 AK291042 AK308727 AK304004 BC047392 BX640667 AB081317 AB081318 AB081319 AB081320 BC065501 NM_017744 NM_138727 NM_138728 NM_138729	4626	-	NM_006135 TSC_hg19_v1_chr1_+_113162092	4828	+	BC141825|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_024494|WNT2B|7482|wingless-type MMTV integration site family, member 2B##AB045116|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_004185|WNT2B|7482|wingless-type MMTV integration site family, member 2B##BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK092791|LOC100129406|100129406|uncharacterized LOC100129406##BX648738|CAPZA1|829|capping protein (actin filament) muscle Z-line, alpha 1##BC027898|ST7L|54879|suppression of tumorigenicity 7 like##AK021719|ST7L|54879|suppression of tumorigenicity 7 like##EU831659|ST7L|54879|suppression of tumorigenicity 7 like##EU831742|ST7L|54879|suppression of tumorigenicity 7 like##AK295507|ST7L|54879|suppression of tumorigenicity 7 like##AK295955|ST7L|54879|suppression of tumorigenicity 7 like##AK291042|ST7L|54879|suppression of tumorigenicity 7 like##AK308727|ST7L|54879|suppression of tumorigenicity 7 like##AK304004|ST7L|54879|suppression of tumorigenicity 7 like##BC047392|ST7L|54879|suppression of tumorigenicity 7 like##BX640667|ST7L|54879|suppression of tumorigenicity 7 like##AB081317|ST7L|54879|suppression of tumorigenicity 7 like##AB081318|ST7L|54879|suppression of tumorigenicity 7 like##AB081319|ST7L|54879|suppression of tumorigenicity 7 like##AB081320|ST7L|54879|suppression of tumorigenicity 7 like##BC065501|ST7L|54879|suppression of tumorigenicity 7 like##NM_017744|ST7L|54879|suppression of tumorigenicity 7 like##NM_138727|ST7L|54879|suppression of tumorigenicity 7 like##NM_138728|ST7L|54879|suppression of tumorigenicity 7 like##NM_138729|ST7L|54879|suppression of tumorigenicity 7 like##NM_006135|CAPZA1|829|capping protein (actin filament) muscle Z-line, alpha 1	0.304464	CTCF.p2:11:0.304
chr15	70390309	70390454	reg1022453.p2	6.146	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-138	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-154	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-48472	-	TSC_hg19_v1_chr15_-_70878946 BC040579	488563	-	BC016881 AL834243 NM_001008224 AK055435	604246	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	665461	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.813352	CTCF.p2:1:0.813
chr15	59453538	59453661	reg1021126.p1	6.145	+	TSC_hg19_v1_chr15_+_59397344 NM_004701 AK001404 AL080146 BC105086 BC105112 AF087910 AK222611 AB020981 AF002822 AB587333 AM393577 BT019458 CR533527	-56228	+	TSC_hg19_v1_chr15_+_59359061 AK095327	-94521	+	BX647259 TSC_hg19_v1_chr15_+_59280332 AK131304	-173320	+	AY642121 BC022034 AY009108 NM_033195 AK312777 AK058192	45453	+	AB290177 TSC_hg19_v1_chr15_-_59665055	211455	-	TSC_hg19_v1_chr15_-_59665065 AK291688	211467	-	NM_004701|CCNB2|9133|cyclin B2##AK001404|CCNB2|9133|cyclin B2##AL080146|CCNB2|9133|cyclin B2##BC105086|CCNB2|9133|cyclin B2##BC105112|CCNB2|9133|cyclin B2##AF087910|CCNB2|9133|cyclin B2##AK222611|CCNB2|9133|cyclin B2##AB020981|CCNB2|9133|cyclin B2##AF002822|CCNB2|9133|cyclin B2##AM393577|CCNB2|9133|cyclin B2##BT019458|CCNB2|9133|cyclin B2##CR533527|CCNB2|9133|cyclin B2##AK095327|RNF111|54778|ring finger protein 111##BX647259|RNF111|54778|ring finger protein 111##AK131304|RNF111|54778|ring finger protein 111##AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B##BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AB290177|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE	0.080282	
chr16	88878795	88878958	reg1022572.p2	6.145	+	TSC_hg19_v1_chr16_-_88878337 BC107151 CR749423 NM_000485 NM_001030018	-541	-	TSC_hg19_v1_chr16_+_88870215 AF321125 BC000137 BC009410 BC008860 BC008676	-8596	+	AB053172 NM_030928 TSC_hg19_v1_chr16_+_88870207	-8679	+	AK308269 BX649181 AK310392 TSC_hg19_v1_chr16_-_88923340	44412	-	AK294390 TSC_hg19_v1_chr16_-_88923352 AK312655 BC056151 BC050684 NM_000512 BC018027	44494	-	TSC_hg19_v1_chr16_+_88923536 NM_016209 AF089106 AX771012 AK311885 BC105809 AK126779 AF161524 AK310805 AX771013 BC018024 AX771014 BC011369	44647	+	BC107151|APRT|353|adenine phosphoribosyltransferase##CR749423|APRT|353|adenine phosphoribosyltransferase##NM_000485|APRT|353|adenine phosphoribosyltransferase##NM_001030018|APRT|353|adenine phosphoribosyltransferase##AF321125|CDT1|81620|chromatin licensing and DNA replication factor 1##BC000137|CDT1|81620|chromatin licensing and DNA replication factor 1##BC009410|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008860|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008676|CDT1|81620|chromatin licensing and DNA replication factor 1##AB053172|CDT1|81620|chromatin licensing and DNA replication factor 1##NM_030928|CDT1|81620|chromatin licensing and DNA replication factor 1##AK308269|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BX649181|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK310392|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK294390|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK312655|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC056151|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC050684|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##NM_000512|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC018027|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##NM_016209|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF089106|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771012|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK311885|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC105809|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK126779|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF161524|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK310805|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771013|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC018024|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771014|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC011369|TRAPPC2L|51693|trafficking protein particle complex 2-like	0.124125	
chr19	1848799	1848914	reg1022169.p1	6.145	+	TSC_hg19_v1_chr19_-_1848471 BC032244 NM_020695	-395	-	AB384122 TSC_hg19_v1_chr19_-_1848439 AB032964 BC016923	-455	-	AY302538 NM_001178002 TSC_hg19_v1_chr19_-_1812276 BC035162 NM_138813 AK125225 AK125969	-36619	-	TSC_hg19_v1_chr19_-_1863441 AF327440	14604	-	TSC_hg19_v1_chr19_-_1863556 NM_031918	14700	-	TSC_hg19_v1_chr19_-_1876169 BC067908	27310	-	BC032244|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##NM_020695|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##AB032964|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC016923|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##AY302538|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001178002|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##BC035162|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_138813|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125225|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125969|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AF327440|KLF16|83855|Kruppel-like factor 16##NM_031918|KLF16|83855|Kruppel-like factor 16	0.993098	CTCF.p2:-22:0.993
chr1	19506154	19506297	reg1023400.p2	6.144	+	TSC_hg19_v1_chr1_-_19282773 NM_001136265	-223426	-	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-277071	-	AK294552 NM_001161504	-288841	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	30521	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	71767	-	AK075563 AK291618 TSC_hg19_v1_chr1_-_19578019	71792	-	NM_001136265|IFFO2|126917|intermediate filament family orphan 2##DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090##AK075563|KIAA0090|23065|KIAA0090##AK291618|KIAA0090|23065|KIAA0090	0.264281	CTCF.p2:4:0.264
chr15	59272676	59272817	reg1023815.p4	6.144	+	TSC_hg19_v1_chr15_-_59225851 BC140851 NM_001013843 NM_024755	-46915	-	AK000867 TSC_hg19_v1_chr15_-_59225776 AK055195 BC108656 AK291423 AK131242	-46964	-	BC060514 TSC_hg19_v1_chr15_+_59063500 AK297291 AK075319 AB075509 BC140811 BC144616	-209224	+	TSC_hg19_v1_chr15_+_59279864 BC060862 BX538130 NM_017610	7111	+	BX647259 TSC_hg19_v1_chr15_+_59280332 AK131304	7533	+	TSC_hg19_v1_chr15_+_59359061 AK095327	86332	+	BC140851|SLTM|79811|SAFB-like, transcription modulator##NM_001013843|SLTM|79811|SAFB-like, transcription modulator##NM_024755|SLTM|79811|SAFB-like, transcription modulator##AK000867|SLTM|79811|SAFB-like, transcription modulator##AK055195|SLTM|79811|SAFB-like, transcription modulator##BC108656|SLTM|79811|SAFB-like, transcription modulator##AK291423|SLTM|79811|SAFB-like, transcription modulator##AK131242|SLTM|79811|SAFB-like, transcription modulator##BC060514|FAM63B|54629|family with sequence similarity 63, member B##AK297291|FAM63B|54629|family with sequence similarity 63, member B##AK075319|FAM63B|54629|family with sequence similarity 63, member B##AB075509|FAM63B|54629|family with sequence similarity 63, member B##BC140811|FAM63B|54629|family with sequence similarity 63, member B##BC144616|FAM63B|54629|family with sequence similarity 63, member B##BC060862|RNF111|54778|ring finger protein 111##BX538130|RNF111|54778|ring finger protein 111##NM_017610|RNF111|54778|ring finger protein 111##BX647259|RNF111|54778|ring finger protein 111##AK131304|RNF111|54778|ring finger protein 111##AK095327|RNF111|54778|ring finger protein 111	0.79435	CTCF.p2:-8:0.794
chr15	98835780	98835950	reg1025018.p1	6.144	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	-331914	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	-331946	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	-1509193	+	AK097062 AK097062 NM_182562	221745	-	TSC_hg19_v1_chr15_+_99191767 AB425196	356106	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	356891	+	BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor	0.942216	CTCF.p2:-8:0.783
chr16	18813089	18813198	reg1022185.p2	6.144	+	AK301636 CU679669 TSC_hg19_v1_chr16_-_18812870 BC010281 D31885 NM_015161 AK291137 AK308092 BX648446 AK300825 AK300869 AK307315	-361	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	-11488	-	TSC_hg19_v1_chr16_-_18798077 AK127316	-15047	-	TSC_hg19_v1_chr16_-_18937724 NM_015092 AB061371	124588	-	AK094664 NM_024847 TSC_hg19_v1_chr16_+_18995296 AY236498 BC047719 AY263165 BC036205 AK293874 CU690480	182176	+	TSC_hg19_v1_chr16_+_18995511 CR933669 NM_001160364	182415	+	AK301636|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BC010281|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##D31885|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##NM_015161|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK291137|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK308092|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BX648446|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK300825|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK300869|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK307315|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a##NM_015092|SMG1|23049|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)##AB061371|SMG1|23049|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)##AK094664|TMC7|79905|transmembrane channel-like 7##NM_024847|TMC7|79905|transmembrane channel-like 7##AY236498|TMC7|79905|transmembrane channel-like 7##BC047719|TMC7|79905|transmembrane channel-like 7##AY263165|TMC7|79905|transmembrane channel-like 7##BC036205|TMC7|79905|transmembrane channel-like 7##AK293874|TMC7|79905|transmembrane channel-like 7##CR933669|TMC7|79905|transmembrane channel-like 7##NM_001160364|TMC7|79905|transmembrane channel-like 7	0.244843	CTCF.p2:-7:0.245
chr6	36547516	36547626	reg1019195.p1	6.144	+	TSC_hg19_v1_chr6_-_36515255 BC012085 NM_007271 BC095413	-32314	-	TSC_hg19_v1_chr6_-_36515239 AK312559	-32419	-	TSC_hg19_v1_chr6_+_36410807 BC023525 AK302861 AK304377	-136739	+	NM_003017 TSC_hg19_v1_chr6_+_36562093	14520	+	TSC_hg19_v1_chr6_+_36562138 AK312553	14565	+	TSC_hg19_v1_chr6_+_36562140 AK304097 D28423 BC000914 BC069018 AF107405	14609	+	BC012085|STK38|11329|serine/threonine kinase 38##NM_007271|STK38|11329|serine/threonine kinase 38##BC095413|STK38|11329|serine/threonine kinase 38##AK312559|STK38|11329|serine/threonine kinase 38##BC023525|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK302861|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK304377|KCTD20|222658|potassium channel tetramerisation domain containing 20##NM_003017|SRSF3|6428|serine/arginine-rich splicing factor 3##AK312553|SRSF3|6428|serine/arginine-rich splicing factor 3##AK304097|SRSF3|6428|serine/arginine-rich splicing factor 3##BC000914|SRSF3|6428|serine/arginine-rich splicing factor 3##BC069018|SRSF3|6428|serine/arginine-rich splicing factor 3##AF107405|SRSF3|6428|serine/arginine-rich splicing factor 3	0.111169	
chr7	42054367	42054476	reg1023069.p1	6.144	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-311736	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1879812	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1879890	+	NM_000168	222196	-	TSC_hg19_v1_chr7_-_42276797 AK308429	222374	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	897168	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.992217	CTCF.p2:2:0.992
chr8	66860862	66861016	reg1020514.p1	6.144	+	TSC_hg19_v1_chr8_-_66754300 AK292680	-106647	-	NM_001242318	-106971	-	HQ258418 AK290801 BC058025 BC126360 NM_002603 U67932	-159688	-	NM_033105 BC016742 AF368276 AL133660	72880	+	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	178401	+	BC002599 BC011031 AK075431 NM_000756	229828	-	AK292680|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##HQ258418|PDE7A|5150|phosphodiesterase 7A##AK290801|PDE7A|5150|phosphodiesterase 7A##BC058025|PDE7A|5150|phosphodiesterase 7A##BC126360|PDE7A|5150|phosphodiesterase 7A##NM_002603|PDE7A|5150|phosphodiesterase 7A##U67932|PDE7A|5150|phosphodiesterase 7A##NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone	0.0	
chr7	143077375	143077514	reg1023446.p2	6.143	+	CU692276 AB384523 TSC_hg19_v1_chr7_-_143059807 AK124557 NM_001031690 BC045611	-17669	-	AK291470 BC050543 NM_014690	-18286	-	TSC_hg19_v1_chr7_+_143058809 AK316227	-18643	+	TSC_hg19_v1_chr7_+_143078362 BC017183 NM_001010972 NM_003461	920	+	BC008743 TSC_hg19_v1_chr7_+_143078395	951	+	BC002323 TSC_hg19_v1_chr7_+_143078404	958	+	AK124557|FAM131B|9715|family with sequence similarity 131, member B##NM_001031690|FAM131B|9715|family with sequence similarity 131, member B##BC045611|FAM131B|9715|family with sequence similarity 131, member B##AK291470|FAM131B|9715|family with sequence similarity 131, member B##BC050543|FAM131B|9715|family with sequence similarity 131, member B##NM_014690|FAM131B|9715|family with sequence similarity 131, member B##AK316227|ZYX|7791|zyxin##BC017183|ZYX|7791|zyxin##NM_001010972|ZYX|7791|zyxin##NM_003461|ZYX|7791|zyxin##BC008743|ZYX|7791|zyxin##BC002323|ZYX|7791|zyxin	0.992396	CTCF.p2:-18:0.992
chrX	108293282	108293387	reg1021782.p1	6.142	+	NM_003604 AF007567	-313712	-	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	-610250	+	BT007228 L22763 U04845 NM_001847 BC005305	-610671	-	NM_001522 L37378	431951	-	AK023289 NM_018698 BC120984 BC120985	485680	+	NM_001242617 TSC_hg19_v1_chrX_+_108780077 AF201942 BC014888 AF212223	486749	+	NM_003604|IRS4|8471|insulin receptor substrate 4##AF007567|IRS4|8471|insulin receptor substrate 4##BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##NM_001522|GUCY2F|2986|guanylate cyclase 2F, retinal##L37378|GUCY2F|2986|guanylate cyclase 2F, retinal##AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2##AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2##BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2##AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2	0.050279	
chr12	78308123	78308262	reg1027106.p1	6.141	+	NM_014903 AJ488201	-83060	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-848903	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-1035409	-	AK094616 NM_001135805	949580	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	950283	+	TSC_hg19_v1_chr12_+_79258517 BX647240	950344	+	NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I##BX647240|SYT1|6857|synaptotagmin I	0.0	
chr19	22072990	22073070	reg1020162.p1	6.141	+	X59244 AK291353 CR933640 TSC_hg19_v1_chr19_-_22034868	-38199	-	TSC_hg19_v1_chr19_-_22018985 M61869 NM_003423 BC006528	-54049	-	BC035579 TSC_hg19_v1_chr19_-_21950382 AK308798 AK126551 NM_173531	-122655	-	BC038199 AK096236 NM_007153 AX721110	120705	-	BC036446 TSC_hg19_v1_chr19_+_22235260 AK056694 NM_033468	162229	+	TSC_hg19_v1_chr19_+_22235290 AF070651	162283	+	X59244|ZNF43|7594|zinc finger protein 43##AK291353|ZNF43|7594|zinc finger protein 43##CR933640|ZNF43|7594|zinc finger protein 43##M61869|ZNF43|7594|zinc finger protein 43##NM_003423|ZNF43|7594|zinc finger protein 43##BC006528|ZNF43|7594|zinc finger protein 43##BC035579|ZNF100|163227|zinc finger protein 100##AK308798|ZNF100|163227|zinc finger protein 100##AK126551|ZNF100|163227|zinc finger protein 100##NM_173531|ZNF100|163227|zinc finger protein 100##BC038199|ZNF208|7757|zinc finger protein 208##AK096236|ZNF208|7757|zinc finger protein 208##NM_007153|ZNF208|7757|zinc finger protein 208##BC036446|ZNF257|113835|zinc finger protein 257##AK056694|ZNF257|113835|zinc finger protein 257##NM_033468|ZNF257|113835|zinc finger protein 257##AF070651|ZNF257|113835|zinc finger protein 257	0.848543	CTCF.p2:12:0.830
chr20	36020956	36021050	reg1023814.p1	6.141	+	TSC_hg19_v1_chr20_+_36011960 BC011566	-9000	+	TSC_hg19_v1_chr20_+_35974513 NM_198291 Z18364	-46496	+	TSC_hg19_v1_chr20_+_35973086 AF272982 NM_005417	-47910	+	TSC_hg19_v1_chr20_-_36073959 D28405	52952	-	NM_005386 NM_181689 TSC_hg19_v1_chr20_+_36149651 AK312069 U25034 BC001768 U25033 AB002392 BT019426	128666	+	NM_001167823	131949	-	BC011566|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##AF272982|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005417|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005386|NNAT|4826|neuronatin##NM_181689|NNAT|4826|neuronatin##AK312069|NNAT|4826|neuronatin##U25034|NNAT|4826|neuronatin##BC001768|NNAT|4826|neuronatin##U25033|NNAT|4826|neuronatin##AB002392|NNAT|4826|neuronatin##BT019426|NNAT|4826|neuronatin##NM_001167823|BLCAP|10904|bladder cancer associated protein	0.870497	CTCF.p2:4:0.870
chr2	231577083	231577263	reg1007822.p1	6.141	+	AK091898 NM_001206704	-295703	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-296217	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-296254	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	373	+	TSC_hg19_v1_chr2_+_231577633 BC020570	471	+	AK292382 NM_001130849 NM_001130850 AK315692	1105	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.0	
chr9	34403922	34404040	reg1022170.p2	6.141	+	AK058087 BC022084 BC029484 NM_032596	-6164	-	AK225981 AF367474 TSC_hg19_v1_chr9_-_34381563 AK094751 NM_001252195 NM_147168 NM_147169	-22434	-	TSC_hg19_v1_chr9_-_34376864 BC070098 NM_020702	-27048	-	TSC_hg19_v1_chr9_-_34458569 AK299882 AK096350 AK123887 AK294054 BC041009 NM_001184940 NM_001184941 NM_001184942 NM_001184943 NM_001184945 NM_147202	54546	-	NM_012144 BC030583 AK290696 AF091619 AK314639 AK303937 AK302186 AK302499 DQ890609 EU176231	54925	+	TSC_hg19_v1_chr9_-_34522975 BC022101 NM_198573	119023	-	AK058087|C9orf24|84688|chromosome 9 open reading frame 24##BC022084|C9orf24|84688|chromosome 9 open reading frame 24##BC029484|C9orf24|84688|chromosome 9 open reading frame 24##NM_032596|C9orf24|84688|chromosome 9 open reading frame 24##AK225981|C9orf24|84688|chromosome 9 open reading frame 24##AF367474|C9orf24|84688|chromosome 9 open reading frame 24##AK094751|C9orf24|84688|chromosome 9 open reading frame 24##NM_001252195|C9orf24|84688|chromosome 9 open reading frame 24##NM_147168|C9orf24|84688|chromosome 9 open reading frame 24##NM_147169|C9orf24|84688|chromosome 9 open reading frame 24##BC070098|KIAA1161|57462|KIAA1161##NM_020702|KIAA1161|57462|KIAA1161##AK299882|C9orf25|203259|chromosome 9 open reading frame 25##AK096350|C9orf25|203259|chromosome 9 open reading frame 25##AK123887|C9orf25|203259|chromosome 9 open reading frame 25##AK294054|C9orf25|203259|chromosome 9 open reading frame 25##BC041009|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184940|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184941|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184942|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184943|C9orf25|203259|chromosome 9 open reading frame 25##NM_001184945|C9orf25|203259|chromosome 9 open reading frame 25##NM_147202|C9orf25|203259|chromosome 9 open reading frame 25##NM_012144|DNAI1|27019|dynein, axonemal, intermediate chain 1##BC030583|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK290696|DNAI1|27019|dynein, axonemal, intermediate chain 1##AF091619|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK314639|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK303937|DNAI1|27019|dynein, axonemal, intermediate chain 1##AK302186|DNAI1|27019|dynein, axonemal, intermediate chain 1##DQ890609|DNAI1|27019|dynein, axonemal, intermediate chain 1##EU176231|DNAI1|27019|dynein, axonemal, intermediate chain 1##BC022101|ENHO|375704|energy homeostasis associated##NM_198573|ENHO|375704|energy homeostasis associated	1.762638	CTCF.p2:-2:0.772	CTCF.p2:-35:0.991
chrX	19611929	19612101	reg1023629.p2	6.141	+	NM_001001671	-78637	-	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	-249933	+	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	-471348	-	TSC_hg19_v1_chrX_-_19689029 AK293237 NM_001184960	77041	-	AK293234 AF542051 TSC_hg19_v1_chrX_-_19817892	205860	-	TSC_hg19_v1_chrX_-_19817907 NM_001024666	205897	-	NM_001001671|MAP3K15|389840|mitogen-activated protein kinase kinase kinase 15##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001024666|SH3KBP1|30011|SH3-domain kinase binding protein 1	0.95585	CTCF.p2:-11:0.956
chr12	68395413	68395534	reg1022710.p2	6.140	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	-352850	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-732043	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-732301	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	157949	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	224079	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	251831	-	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22	0.993958	CTCF.p2:-10:0.994
chr19	34732486	34732617	reg1021266.p1	6.140	+	TSC_hg19_v1_chr19_+_34710343 AL117499	-22171	+	TSC_hg19_v1_chr19_+_34663440 AL834398 AK027643 AB069974 AB069975	-69083	+	TSC_hg19_v1_chr19_+_34663429 AK300208	-69125	+	TSC_hg19_v1_chr19_+_34745535 NM_014686 AB002353 BX648432	12959	+	TSC_hg19_v1_chr19_+_34856083 NM_001184722 AK294396 NM_000175	123289	+	TSC_hg19_v1_chr19_+_34856150 AB209575 AK301103	123587	+	AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AL834398|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK027643|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069974|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069975|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK300208|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_014686|KIAA0355|9710|KIAA0355##AB002353|KIAA0355|9710|KIAA0355##NM_001184722|GPI|2821|glucose-6-phosphate isomerase##AK294396|GPI|2821|glucose-6-phosphate isomerase##NM_000175|GPI|2821|glucose-6-phosphate isomerase##AB209575|GPI|2821|glucose-6-phosphate isomerase##AK301103|GPI|2821|glucose-6-phosphate isomerase	0.0	
chr5	175662257	175662390	reg1024067.p1	6.140	+	BC028606 NM_001079529	-150445	+	NM_032361	-266779	-	TSC_hg19_v1_chr5_-_175395273 BC068499 BC066325 BC006849	-267171	-	TSC_hg19_v1_chr5_+_175665384 BC037298 BC066980 NM_198567 AK299336	3067	+	TSC_hg19_v1_chr5_-_175788768 BC006316 BC010448 BC012848 AK024675 AK225073 AK315428 BC017097 AL390217 BX648859 NM_001079684 NM_001079685 NM_020444	126440	-	TSC_hg19_v1_chr5_+_175792493 BC059361 NM_173664 AK096568	130166	+	BC028606|FAM153B|202134|family with sequence similarity 153, member B##NM_001079529|FAM153B|202134|family with sequence similarity 153, member B##NM_032361|THOC3|84321|THO complex 3##BC068499|THOC3|84321|THO complex 3##BC066325|THOC3|84321|THO complex 3##BC006849|THOC3|84321|THO complex 3##BC037298|C5orf25|375484|chromosome 5 open reading frame 25##BC066980|C5orf25|375484|chromosome 5 open reading frame 25##NM_198567|C5orf25|375484|chromosome 5 open reading frame 25##AK299336|C5orf25|375484|chromosome 5 open reading frame 25##BC006316|KIAA1191|57179|KIAA1191##BC010448|KIAA1191|57179|KIAA1191##BC012848|KIAA1191|57179|KIAA1191##AK315428|KIAA1191|57179|KIAA1191##BC017097|KIAA1191|57179|KIAA1191##AL390217|KIAA1191|57179|KIAA1191##BX648859|KIAA1191|57179|KIAA1191##NM_001079684|KIAA1191|57179|KIAA1191##NM_001079685|KIAA1191|57179|KIAA1191##NM_020444|KIAA1191|57179|KIAA1191##BC059361|ARL10|285598|ADP-ribosylation factor-like 10##NM_173664|ARL10|285598|ADP-ribosylation factor-like 10	0.0	
chr8	38269372	38269477	reg1007400.p4	6.140	+	BC024250 NM_001199660	-24777	+	NM_001199659 NM_144652 TSC_hg19_v1_chr8_+_38244011 AK289944 AK058138 AK302317 BC069830 AL832241 AY173945 AK302474	-25414	+	TSC_hg19_v1_chr8_-_38239790 AF332468 AF332469 NM_017778 NM_023034 BC000030	-29628	-	AK291754 AK309947 AK292470 NM_001174065 NM_001174066 NM_001174067	55877	-	X51803 X57119 X57120 X57121 X57122 M37722 M34185 TSC_hg19_v1_chr8_-_38325674	56183	-	M34187 M34188 M34186 TSC_hg19_v1_chr8_-_38326072	56524	-	BC024250|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##NM_001199660|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##NM_001199659|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##NM_144652|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK289944|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK058138|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK302317|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##BC069830|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AL832241|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AY173945|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AK302474|LETM2|137994|leucine zipper-EF-hand containing transmembrane protein 2##AF332468|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##AF332469|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##NM_017778|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##NM_023034|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##BC000030|WHSC1L1|54904|Wolf-Hirschhorn syndrome candidate 1-like 1##AK291754|FGFR1|2260|fibroblast growth factor receptor 1##AK309947|FGFR1|2260|fibroblast growth factor receptor 1##AK292470|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174065|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174066|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174067|FGFR1|2260|fibroblast growth factor receptor 1##X51803|FGFR1|2260|fibroblast growth factor receptor 1##X57119|FGFR1|2260|fibroblast growth factor receptor 1##X57120|FGFR1|2260|fibroblast growth factor receptor 1##X57121|FGFR1|2260|fibroblast growth factor receptor 1##X57122|FGFR1|2260|fibroblast growth factor receptor 1##M37722|FGFR1|2260|fibroblast growth factor receptor 1##M34185|FGFR1|2260|fibroblast growth factor receptor 1##M34187|FGFR1|2260|fibroblast growth factor receptor 1##M34188|FGFR1|2260|fibroblast growth factor receptor 1##M34186|FGFR1|2260|fibroblast growth factor receptor 1	0.0	
chrX	56308357	56308472	reg1020455.p1	6.140	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-49504	+	TSC_hg19_v1_chrX_+_55744181 NM_006064 NM_016656 AL831926 AK289407 BC034726 X90530	-564226	+	BC012934 NM_198451	-658582	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	281637	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	447277	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	713557	-	NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##NM_006064|RRAGB|10325|Ras-related GTP binding B##NM_016656|RRAGB|10325|Ras-related GTP binding B##AL831926|RRAGB|10325|Ras-related GTP binding B##AK289407|RRAGB|10325|Ras-related GTP binding B##BC034726|RRAGB|10325|Ras-related GTP binding B##X90530|RRAGB|10325|Ras-related GTP binding B##BC012934|FOXR2|139628|forkhead box R2##NM_198451|FOXR2|139628|forkhead box R2##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3	0.232937	CTCF.p2:-8:0.233
chr12	91749285	91749422	reg1027113.p1	6.139	+	NM_001920	-172548	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-172773	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-176042	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	790290	-	AJ845165 AJ845166 NM_001025233	1068381	+	AJ845168 NM_001025232	1072570	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.963522	CTCF.p2:12:0.964
chr16	69830651	69830762	reg1003549.p2	6.139	+	TSC_hg19_v1_chr16_+_69796265 BC064531 AJ001982 NM_007014 NM_199423 U96114	-34450	+	TSC_hg19_v1_chr16_+_69796208 AK312792	-34518	+	AF190161 TSC_hg19_v1_chr16_-_69788828 BC064630 CU687926 AK314307 AK001028 AB026125 NM_014062 AY487344	-41883	-	AK126332 NM_199424 TSC_hg19_v1_chr16_+_69958904	128196	+	BC078143 NM_001136214	153919	+	AF521893 NM_182619 BC141808 AF428259 AF448856 AL833339 AK289884 AK298310 AK074773 EU831776 EU831854 CU687316 AK096051	154386	+	BC064531|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AJ001982|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_007014|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_199423|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##U96114|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AK312792|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AF190161|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##BC064630|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AK314307|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AK001028|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AB026125|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##NM_014062|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AY487344|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AK126332|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_199424|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##BC078143|CLEC18A|348174|C-type lectin domain family 18, member A##NM_001136214|CLEC18A|348174|C-type lectin domain family 18, member A##AF521893|CLEC18A|348174|C-type lectin domain family 18, member A##NM_182619|CLEC18A|348174|C-type lectin domain family 18, member A##BC141808|CLEC18A|348174|C-type lectin domain family 18, member A##AF428259|CLEC18A|348174|C-type lectin domain family 18, member A##AF448856|CLEC18C|283971|C-type lectin domain family 18, member C##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AK289884|CLEC18A|348174|C-type lectin domain family 18, member A##AK298310|CLEC18A|348174|C-type lectin domain family 18, member A##AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##EU831776|CLEC18A|348174|C-type lectin domain family 18, member A##EU831854|CLEC18A|348174|C-type lectin domain family 18, member A##AK096051|CLEC18A|348174|C-type lectin domain family 18, member A	0.0	
chr17	49399901	49400026	reg1026623.p1	6.139	+	AF151806 TSC_hg19_v1_chr17_+_49337913 AK314399 BC025276 BC001535	-62038	+	TSC_hg19_v1_chr17_+_49337906 NM_016001	-62064	+	TSC_hg19_v1_chr17_+_49337888 AK026355	-62077	+	TSC_hg19_v1_chr17_-_50235676 AK294652 AK313001	835725	-	TSC_hg19_v1_chr17_-_50236075 BC047456 BC068462	836077	-	CR936674 TSC_hg19_v1_chr17_-_50236127 NM_020178	836175	-	AF151806|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK314399|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC025276|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC001535|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##NM_016001|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK026355|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK294652|CA10|56934|carbonic anhydrase X##AK313001|CA10|56934|carbonic anhydrase X##BC047456|CA10|56934|carbonic anhydrase X##BC068462|CA10|56934|carbonic anhydrase X##NM_020178|CA10|56934|carbonic anhydrase X	0.914104	CTCF.p2:-36:0.891
chr20	12951084	12951189	reg1018718.p1	6.139	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-1052579	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	-1079687	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-2296567	-	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	38505	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	251287	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	668428	-	AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1	0.785717	CTCF.p2:-23:0.786
chr6	117638524	117638658	reg1024107.p1	6.139	+	AY056583 NM_153453 TSC_hg19_v1_chr6_+_117586720 AJ578053 NM_182645 BC100798 BC100799 BC118545 BC118622 BC069316 AK096878	-51780	+	BC039248 NM_173560	-440216	+	AF502962 NM_148963 AY435125 AY435126 AY435127	-488384	-	M34353 NM_002944 TSC_hg19_v1_chr6_-_117747031	108440	-	TSC_hg19_v1_chr6_+_117803805 BC035671 NM_173674 AK095973	165246	+	CU679397 TSC_hg19_v1_chr6_-_117923611 AF287894	284940	-	AY056583|VGLL2|245806|vestigial like 2 (Drosophila)##NM_153453|VGLL2|245806|vestigial like 2 (Drosophila)##AJ578053|VGLL2|245806|vestigial like 2 (Drosophila)##NM_182645|VGLL2|245806|vestigial like 2 (Drosophila)##BC100798|VGLL2|245806|vestigial like 2 (Drosophila)##BC100799|VGLL2|245806|vestigial like 2 (Drosophila)##BC118545|VGLL2|245806|vestigial like 2 (Drosophila)##BC118622|VGLL2|245806|vestigial like 2 (Drosophila)##BC069316|VGLL2|245806|vestigial like 2 (Drosophila)##AK096878|VGLL2|245806|vestigial like 2 (Drosophila)##BC039248|RFX6|222546|regulatory factor X, 6##NM_173560|RFX6|222546|regulatory factor X, 6##AF502962|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##NM_148963|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435125|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435126|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435127|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##BC035671|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##NM_173674|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AK095973|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AF287894|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing	0.952997	CTCF.p2:30:0.953
chr6	71230432	71230540	reg1023584.p2	6.139	+	NM_001162529 AB037832	-94329	+	TSC_hg19_v1_chr6_+_71123224 CR749254 BC131782	-107272	+	TSC_hg19_v1_chr6_+_71123122 NM_001105531 NM_020819	-107373	+	TSC_hg19_v1_chr6_+_71276632 BC018085 NM_145267 BC104649 GQ129294 GQ129295	46139	+	TSC_hg19_v1_chr6_+_71377511 NM_001044305 NM_021940 AF442495	147037	+	TSC_hg19_v1_chr6_+_71377620 AK315579 BC028074 BC008672 AK303387 BC036123 AK023221 AY055003 AY055004 AK222711 AK290448 CU688386	147169	+	NM_001162529|FAM135A|57579|family with sequence similarity 135, member A##AB037832|FAM135A|57579|family with sequence similarity 135, member A##CR749254|FAM135A|57579|family with sequence similarity 135, member A##BC131782|FAM135A|57579|family with sequence similarity 135, member A##NM_001105531|FAM135A|57579|family with sequence similarity 135, member A##NM_020819|FAM135A|57579|family with sequence similarity 135, member A##BC018085|C6orf57|135154|chromosome 6 open reading frame 57##NM_145267|C6orf57|135154|chromosome 6 open reading frame 57##BC104649|C6orf57|135154|chromosome 6 open reading frame 57##GQ129294|C6orf57|135154|chromosome 6 open reading frame 57##GQ129295|C6orf57|135154|chromosome 6 open reading frame 57##NM_001044305|SMAP1|60682|small ArfGAP 1##NM_021940|SMAP1|60682|small ArfGAP 1##AF442495|SMAP1|60682|small ArfGAP 1##AK315579|SMAP1|60682|small ArfGAP 1##BC028074|SMAP1|60682|small ArfGAP 1##BC008672|SMAP1|60682|small ArfGAP 1##AK303387|SMAP1|60682|small ArfGAP 1##BC036123|SMAP1|60682|small ArfGAP 1##AK023221|SMAP1|60682|small ArfGAP 1##AY055003|SMAP1|60682|small ArfGAP 1##AY055004|SMAP1|60682|small ArfGAP 1##AK222711|SMAP1|60682|small ArfGAP 1##AK290448|SMAP1|60682|small ArfGAP 1	0.983423	CTCF.p2:-11:0.585	CTCF.p2:-12:0.398
chr7	73632056	73632236	reg1022115.p2	6.139	+	TSC_hg19_v1_chr7_+_73624361 AF252613	-7792	+	TSC_hg19_v1_chr7_+_73624338 AF161531 AF252611 AF252612 AF252614 AK225150 AK290074 AK290916	-7810	+	TSC_hg19_v1_chr7_+_73624283 BC001609 AK002099 BC006080	-7864	+	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	36565	-	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	36590	-	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	71641	+	AF252613|LAT2|7462|linker for activation of T cells family, member 2##AF161531|LAT2|7462|linker for activation of T cells family, member 2##AF252611|LAT2|7462|linker for activation of T cells family, member 2##AF252612|LAT2|7462|linker for activation of T cells family, member 2##AF252614|LAT2|7462|linker for activation of T cells family, member 2##AK225150|LAT2|7462|linker for activation of T cells family, member 2##AK290074|LAT2|7462|linker for activation of T cells family, member 2##AK290916|LAT2|7462|linker for activation of T cells family, member 2##BC001609|LAT2|7462|linker for activation of T cells family, member 2##AK002099|LAT2|7462|linker for activation of T cells family, member 2##BC006080|LAT2|7462|linker for activation of T cells family, member 2##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2	0.0	
chr10	98956404	98956559	reg1026145.p1	6.138	+	AB017167 TSC_hg19_v1_chr10_-_98945702 BC028105 AB011537 BC146761 NM_003061 BC139909	-10796	-	TSC_hg19_v1_chr10_-_98945606 BC146851	-10886	-	AY029183 AB383997 TSC_hg19_v1_chr10_-_98945570	-11007	-	TSC_hg19_v1_chr10_-_99052389 AK090447 AK303055	95893	-	TSC_hg19_v1_chr10_-_99052395 AY336750 DQ338460 BX648189 BC113888 BC114490 CR749412	95928	-	BX648194 NM_001204300 NM_032900 TSC_hg19_v1_chr10_-_99052429	95958	-	AB017167|SLIT1|6585|slit homolog 1 (Drosophila)##BC028105|SLIT1|6585|slit homolog 1 (Drosophila)##AB011537|SLIT1|6585|slit homolog 1 (Drosophila)##BC146761|SLIT1|6585|slit homolog 1 (Drosophila)##NM_003061|SLIT1|6585|slit homolog 1 (Drosophila)##BC139909|SLIT1|6585|slit homolog 1 (Drosophila)##BC146851|SLIT1|6585|slit homolog 1 (Drosophila)##AY029183|SLIT1|6585|slit homolog 1 (Drosophila)##AK090447|ARHGAP19|84986|Rho GTPase activating protein 19##AK303055|ARHGAP19|84986|Rho GTPase activating protein 19##AY336750|ARHGAP19-SLIT1|100533184|ARHGAP19-SLIT1 readthrough##DQ338460|ARHGAP19|84986|Rho GTPase activating protein 19##BX648189|ARHGAP19|84986|Rho GTPase activating protein 19##BC113888|ARHGAP19|84986|Rho GTPase activating protein 19##BC114490|ARHGAP19|84986|Rho GTPase activating protein 19##CR749412|ARHGAP19|84986|Rho GTPase activating protein 19##BX648194|ARHGAP19|84986|Rho GTPase activating protein 19##NM_001204300|ARHGAP19|84986|Rho GTPase activating protein 19##NM_032900|ARHGAP19|84986|Rho GTPase activating protein 19	0.01833	
chr11	8108912	8109008	reg1023203.p1	6.138	+	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-6161	+	NM_003320 U82467	-48781	+	AK293528 TSC_hg19_v1_chr11_+_8040820	-68155	+	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	81603	-	BC069752 BC069793 M26682 NM_002315	176392	-	AK093251 AX748014 BC031231 NM_030906	506497	-	NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##NM_003320|TUB|7275|tubby homolog (mouse)##U82467|TUB|7275|tubby homolog (mouse)##AK293528|TUB|7275|tubby homolog (mouse)##AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33	0.147471	
chr20	7075198	7075308	reg1023787.p1	6.138	+	BC069214 NM_001200	-326509	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-971090	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-971376	-	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	845849	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	925047	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	925154	-	BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4	0.952939	CTCF.p2:1:0.953
chr4	124319519	124319585	reg1016178.p2	6.138	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-1596	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-475300	+	AF019632 AK294450 NM_198041	-475412	-	AK026960 BC063856 NM_005841	1121	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	1314262	-	NM_024582	1918014	+	AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AF019632|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK294450|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_198041|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)	0.151206	
chr7	78236480	78236613	reg1023662.p1	6.138	+	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-767037	+	BC067742 TSC_hg19_v1_chr7_+_77428204 AL136883	-808336	+	TSC_hg19_v1_chr7_+_77428194 NM_001127358 NM_001127360 AK225854 AK090643 AX746556 AK308289	-808405	+	AB014605 BC150277 AK297353 AF038563 NM_012301	846333	-	TSC_hg19_v1_chr7_+_79083303 AK311103	846611	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	1527593	+	BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##BC067742|PHTF2|57157|putative homeodomain transcription factor 2##AL136883|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2##AK225854|PHTF2|57157|putative homeodomain transcription factor 2##AK090643|PHTF2|57157|putative homeodomain transcription factor 2##AK308289|PHTF2|57157|putative homeodomain transcription factor 2##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1	0.538906	CTCF.p2:15:0.539
chrX	114913946	114914045	reg1024151.p1	6.138	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-86127	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-116953	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-118389	+	BC003645 TSC_hg19_v1_chrX_-_115085443	171444	-	AK313927 NM_000686 X87723 U16957	388000	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	653772	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.194323	
chr18	45302496	45302588	reg1023363.p1	6.136	+	TSC_hg19_v1_chr18_-_44702736 NM_016097	-599792	-	TSC_hg19_v1_chr18_-_44702734 AK027108	-599809	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	-599853	-	BC014840 NM_005901	154383	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	154673	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	154947	-	NM_016097|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2	0.422905	CTCF.p2:-8:0.423
chr4	177297307	177297432	reg1022316.p1	6.136	+	TSC_hg19_v1_chr4_-_177241652 AK096223	-55738	-	TSC_hg19_v1_chr4_+_177241122 AK026302 AL136660 AY359044 BC043490 BC053883 BC047290 CU690386 EU831652 EU831735	-56201	+	TSC_hg19_v1_chr4_+_177241098 NM_021928	-56316	+	AK313879 BC035212 U58111 X94216 U43142 BC063685 NM_005429 TSC_hg19_v1_chr4_-_177713956	416441	-	TSC_hg19_v1_chr4_+_178231006 NM_018248	933624	+	TSC_hg19_v1_chr4_+_178231027 AK001720 BC025954 AK307692 AB079071	933691	+	AK026302|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AL136660|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AY359044|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC043490|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC053883|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC047290|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831652|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831735|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##NM_021928|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AK313879|VEGFC|7424|vascular endothelial growth factor C##BC035212|VEGFC|7424|vascular endothelial growth factor C##U58111|VEGFC|7424|vascular endothelial growth factor C##X94216|VEGFC|7424|vascular endothelial growth factor C##U43142|VEGFC|7424|vascular endothelial growth factor C##BC063685|VEGFC|7424|vascular endothelial growth factor C##NM_005429|VEGFC|7424|vascular endothelial growth factor C##NM_018248|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK001720|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##BC025954|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AK307692|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)##AB079071|NEIL3|55247|nei endonuclease VIII-like 3 (E. coli)	0.994154	CTCF.p2:-7:0.994
chr11	20265683	20265776	reg1021177.p1	6.135	+	NM_001029865	-83860	-	AK290458 TSC_hg19_v1_chr11_+_20070637	-195106	+	TSC_hg19_v1_chr11_+_20049136 AK307574	-216597	+	NM_006410 TSC_hg19_v1_chr11_+_20385245 NM_001098521	119513	+	TSC_hg19_v1_chr11_+_20385268 AK292092 NM_001098520	119552	+	TSC_hg19_v1_chr11_+_20385346 BC002439 NM_001098522	119634	+	NM_001029865|DBX1|120237|developing brain homeobox 1##AK290458|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##NM_006410|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098521|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##AK292092|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098520|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##BC002439|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa##NM_001098522|HTATIP2|10553|HIV-1 Tat interactive protein 2, 30kDa	0.960498	CTCF.p2:-15:0.960
chr13	77576868	77576972	reg1024079.p2	6.135	+	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	-10751	+	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	-116313	-	BC013764 TSC_hg19_v1_chr13_-_77460431	-116520	-	TSC_hg19_v1_chr13_-_77601295 AL833187 BC063796 BC072448	24362	-	TSC_hg19_v1_chr13_-_77601303 AK314442 NM_012158	24411	-	NM_015057 TSC_hg19_v1_chr13_-_77901230	324283	-	NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AL833187|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC063796|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC072448|FBXL3|26224|F-box and leucine-rich repeat protein 3##AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_015057|MYCBP2|23077|MYC binding protein 2	0.977794	CTCF.p2:-1:0.978
chr14	69813561	69813691	reg1023085.p1	6.135	+	AK299588 TSC_hg19_v1_chr14_+_69726876 AB032956 BC122545 BC098578 AK315848 AK289745 BC036812 AB384119 AB078143 AJ505951	-86689	+	NM_001168368 NM_020692	-86946	+	AK292563 NM_001193362 NM_001193363 AK295601 BX161412	-155110	+	BC071709 TSC_hg19_v1_chr14_-_69865012 BC014301 AK130850 AK312186 D85758 NM_004450 U66871	51377	-	NM_001252151 NM_001252152 AK293222 AK316381 TSC_hg19_v1_chr14_+_69865137	51492	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	51769	+	AK299588|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AB032956|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC122545|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC098578|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK315848|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK289745|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC036812|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AB078143|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AJ505951|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##NM_001168368|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##NM_020692|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2##AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2##BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2##BC071709|ERH|2079|enhancer of rudimentary homolog (Drosophila)##BC014301|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK130850|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK312186|ERH|2079|enhancer of rudimentary homolog (Drosophila)##D85758|ERH|2079|enhancer of rudimentary homolog (Drosophila)##NM_004450|ERH|2079|enhancer of rudimentary homolog (Drosophila)##U66871|ERH|2079|enhancer of rudimentary homolog (Drosophila)##NM_001252151|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252152|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK293222|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK316381|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9	0.997758	CTCF.p2:-7:0.998
chr15	99496333	99496495	reg1023356.p3	6.135	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-303658	+	TSC_hg19_v1_chr15_+_99191767 AB425196	-304443	+	AK097062 AK097062 NM_182562	-438804	-	BC104743 BC104744 BC105686 NM_001102612	52423	-	AK058162 NM_001167902	54609	-	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	148826	+	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein	0.224829	CTCF.p2:-23:0.225
chr18	11655431	11655548	reg1023592.p2	6.135	+	NM_022068	-506729	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-1129392	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-1129433	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	33723	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	96026	+	L10665 TSC_hg19_v1_chr18_+_11752245	96726	+	NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.999283	CTCF.p2:0:0.999
chr20	52353451	52353585	reg1024312.p1	6.135	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-142719	-	AF041259 NM_006526	-153883	-	AK302570 NM_001193421	-551697	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	333544	-	AK315220 NM_003657	333785	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	437002	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr10	64024654	64024769	reg1023897.p2	6.134	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	-215615	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-363280	+	NM_032199	-363699	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	3828	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	109332	+	AJ505150 NM_199452	255495	+	BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365	0.619282	CTCF.p2:6:0.619
chr13	96189057	96189200	reg1023157.p2	6.133	+	NM_001160100 NM_182848 AK055855	-103274	+	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	-235416	-	X65666 X71136 AB464716 NM_007084	-824810	-	TSC_hg19_v1_chr13_+_96204946 NM_006984 BC010920 U89916 AK315737 DQ892831 DQ896077 CR456845	15846	+	AB385415 AF272347 AF272348 TSC_hg19_v1_chr13_-_96294398	105215	-	BC011450 AB023213 TSC_hg19_v1_chr13_-_96296961 BC041804 NM_014934 NM_198968	107812	-	NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##NM_006984|CLDN10|9071|claudin 10##BC010920|CLDN10|9071|claudin 10##U89916|CLDN10|9071|claudin 10##AK315737|CLDN10|9071|claudin 10##DQ892831|CLDN10|9071|claudin 10##DQ896077|CLDN10|9071|claudin 10##CR456845|CLDN10|9071|claudin 10##AF272347|DZIP1|22873|DAZ interacting protein 1##AF272348|DZIP1|22873|DAZ interacting protein 1##BC011450|DZIP1|22873|DAZ interacting protein 1##AB023213|DZIP1|22873|DAZ interacting protein 1##BC041804|DZIP1|22873|DAZ interacting protein 1##NM_014934|DZIP1|22873|DAZ interacting protein 1##NM_198968|DZIP1|22873|DAZ interacting protein 1	0.700993	CTCF.p2:-27:0.701
chr9	7234244	7234384	reg1022801.p1	6.133	+	TSC_hg19_v1_chr9_+_6757984 AB018323 AK304095 AK314355 AB037901 BC008296 AK303651 AK304032 BC104859 BC104861 BC143571	-476275	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	-476647	+	AK310439 NM_001146696	-513452	+	AL137489 TSC_hg19_v1_chr9_-_7799779 BC009510 AK308643 AK128876 AK292632 NM_033428	565401	-	TSC_hg19_v1_chr9_+_8713275 AY779046	1478978	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	1499605	-	AB018323|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304095|KDM4C|23081|lysine (K)-specific demethylase 4C##AK314355|KDM4C|23081|lysine (K)-specific demethylase 4C##AB037901|KDM4C|23081|lysine (K)-specific demethylase 4C##BC008296|KDM4C|23081|lysine (K)-specific demethylase 4C##AK303651|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304032|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104859|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104861|KDM4C|23081|lysine (K)-specific demethylase 4C##BC143571|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##AL137489|C9orf123|90871|chromosome 9 open reading frame 123##BC009510|C9orf123|90871|chromosome 9 open reading frame 123##AK292632|C9orf123|90871|chromosome 9 open reading frame 123##NM_033428|C9orf123|90871|chromosome 9 open reading frame 123##AY779046|RPL18A|6142|ribosomal protein L18a##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	0.572401	CTCF.p2:-1:0.562
chr1	182993132	182993274	reg1021347.p2	6.132	+	TSC_hg19_v1_chr1_+_182992694 AB385108	-431	+	TSC_hg19_v1_chr1_+_182992572 BC067813 NM_002293 J03202	-699	+	BC050305 BC132764 BC144326 AF288398 NM_030933 BC026084	-70622	-	BC035429 TSC_hg19_v1_chr1_+_183114284	121048	+	NM_005562 NM_018891 TSC_hg19_v1_chr1_+_183155211	161989	+	AK307945 Z15008 Z15009 TSC_hg19_v1_chr1_+_183155386	162170	+	BC067813|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##NM_002293|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##J03202|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##BC050305|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC132764|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC144326|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##AF288398|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##NM_030933|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC026084|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC035429|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##NM_005562|LAMC2|3918|laminin, gamma 2##NM_018891|LAMC2|3918|laminin, gamma 2##AK307945|LAMC2|3918|laminin, gamma 2##Z15008|LAMC2|3918|laminin, gamma 2##Z15009|LAMC2|3918|laminin, gamma 2	0.966677	CTCF.p2:-2:0.954
chr14	106598463	106598643	reg1021113.p1	6.132	+	GU552766 DQ454945 DQ454680 DQ454800 DQ100736 HQ392877 AY062313 JN110910 JN111168 L03821 L04324 FJ385334 FJ385335 HM774019 HM774079 HM774175 HM774429 HM774436 HM774460 HM774566 HM774691 HM774780 HM774984 AF165105 AY062308 DQ100831 AJ300807 AB063700 AY423173 AY062309 DQ100870 GU570344 HM994897 HM994907 HM994915 HM995019 HM995419 HM995424 HM995733 HM995761 HM995921 HM995935 HM995953 HM996087 HM996247 HM996409 DQ840731 DQ840896 AB374202 AM279603 AY866783 DQ431491 EF178033 FJ385392 GU570335 AB021538 AB063673 AB066975 AB067002 AB067017 AB067076 AB067261 AB363102 AB363150 AF062210 AF098364 AF174056 AF174100 AF174120 AF301484 AF455549 AF471257 AF471259 AF471261 AF471262 AF471264 AF471363 AF471478 AF471487 AF471497 AJ007956 AJ389180 AJ399809 AJ413989 AJ555276 AJ556639 AJ579273 AM040537 AY268370 AY466509 AY685302 AY685304 AY921574 AY921575 AY927662 AY941906 D83675 DQ065617 DQ065728 DQ535267 DQ535281 DQ535298 DQ535334 DQ535408 DQ535485 DQ926436 DQ926504 DQ926507 DQ926513 DQ926550 EF178020 GU570303 GU570338 GU570343 GU570348 L33984 S65535 Z33898 AY670714 HM995884 AF062141 L03683 L38431 X65894 X81740 M18515 BC053984 TSC_hg19_v1_chr14_-_106586668	-12052	-	DQ454787 U64487 AF460704 AF460740 AF460807 DQ454554 AL389978 FJ385400 DQ454728 DQ454993 DQ454902 GQ232943 GU552699 AY003824 AY003849 DQ454431 EF566904 AY003777 DQ454493 DQ454848 GU552714 GU552717 DQ454498 DQ454515 DQ454965 DQ523862 EF407823 DQ454754 DQ454849 DQ454990 FJ840311 FJ840313 FJ840317 FJ840329 FJ840349 FJ873842 FJ873857 FJ873909 FJ873912 FJ873925 FJ874051 FJ874081 FJ874083 FJ874089 HM116118 AY003786 EU433870 EF175391 EF175399 EF175431 EF175439 EF441746 EU433865 EU667604 EU099143 EU099237 EU099244 EU099063 EU099194 EU099113 EU099200 AM183985 AM183986 EU099292 HQ392870 AF103124 DQ100718 AF103028 AF103040 AF103322 HM774410 L07309 L07310 L07312 JN110741 L03824 L03825 L04325 HM774027 HM774097 HM774142 HM774318 HM774446 HM774453 HM774557 HM774576 HM774604 HM774628 HM774645 HM774671 HM774698 HM774809 HM774847 HM774858 HM775011 HM775058 AF165102 HM775038 HM775039 HM775042 AF082199 EU146392 EU146393 EU146395 AY376083 AY376084 AF103217 AY485363 DQ100667 DQ926397 DQ926487 AF062294 DQ187521 DQ187649 DQ523968 DQ523986 DQ524059 DQ926170 DQ926613 GU570296 GU570301 HM995316 HM995318 HM995367 HM995592 HM995658 HM995661 HM995663 HM995671 HM995696 HM995697 HM995699 HM995792 HM995793 HM995795 HM995911 HM995912 HM995913 HM995914 HM995915 HM995916 HM995917 HM995918 HM996161 HM996278 DQ187668 DQ322752 DQ322795 DQ322799 DQ322834 DQ322835 DQ322836 DQ322837 DQ322838 DQ322839 DQ322840 DQ322841 DQ322842 DQ322843 DQ322847 DQ322848 DQ322849 DQ322850 DQ322851 DQ322852 DQ322853 DQ322854 DQ322907 DQ322908 DQ322924 DQ322985 DQ322986 DQ322987 DQ840668 DQ840696 DQ840724 DQ840738 DQ840869 DQ840885 DQ840898 DQ840902 DQ926246 DQ926249 DQ926313 DQ926315 AB063717 AB063810 AB066882 AB066982 AB067264 AB067265 AB363130 AB363133 AB363178 AB363229 AB363239 AF234248 AJ306671 AY033239 AY033240 AY376073 AY376086 AY376088 AY422530 AY530313 AY640532 AY846271 AY971070 AY971132 AY986395 AY986402 DQ065641 DQ065715 DQ100950 DQ926227 DQ926469 DQ926491 DQ926596 EF178046 EU549734 FJ195526 GU570302 HQ378386 Z46761 AB021522 AB063668 AB363134 AB363177 AB363231 AF021996 AF035794 AF115122 AF119800 AF119801 AF119802 AF119803 AF119804 AF151704 AF174095 AF471243 AF471244 AF471245 AF471248 AF471251 AF471252 AF471253 AJ389186 AJ414018 AJ555260 AJ579155 AJ579190 AJ579223 AJ579232 AJ579237 AJ627246 AY530315 AY685254 AY971117 DQ065650 DQ100894 DQ100911 DQ205140 DQ205152 DQ212511 DQ431495 DQ535391 DQ535412 DQ535423 DQ535428 DQ840729 DQ840811 DQ926123 DQ926333 DQ926625 EF178050 EF633766 EF633767 EF633768 EF633798 FJ492898 GU570300 GU570349 S77136 U64493 U64507 U85230 U96395 X62972 X63081 X64241 X99352 X99366 Z96969 Z96970 Z97036 HM995655 HM995787 HM995788 HM995789 HM995870 L33033 X67907 AY392930 AY393153 AY393157 AY393162 L08089 AF062269 L06912 S72664 X65897 X81736 X81744 X81754 Z11959 BC090940 X61013 X61014 BC073758 AK097320 AK125582 AK130539 AK130586 AK130844 AK301403 TSC_hg19_v1_chr14_-_106573761	-24998	-	AF028100 AF460781 AF460830 DQ523918 DQ454686 DQ454784 AY003751 GQ232926 GQ232842 DQ454536 DQ454572 DQ454577 DQ523874 GU552698 DQ100996 AY003834 AY003866 DQ454881 DQ454918 GQ232935 GU552747 AY003780 DQ454841 DQ523891 FJ694882 FJ839966 FJ839976 FJ839978 FJ839985 FJ839992 FJ840024 FJ840027 FJ840030 FJ840039 FJ840068 FJ840074 FJ840076 FJ840077 FJ840081 FJ840084 FJ840087 FJ840121 FJ840122 FJ840152 FJ840211 FJ840345 FJ840372 FJ840374 FJ840382 FJ840393 FJ873873 FJ873898 FJ873903 FJ873918 FJ873976 FJ873981 FJ874020 FJ874039 FJ874070 AJ008190 AY003813 AY003814 EF175404 EF091903 EF091904 EF175384 EU350416 EU350417 AF035027 EU099275 EU099133 AM183981 AM183982 AM183983 HQ704031 HM774241 L04343 U63211 AF103184 FJ385385 HM774328 HM774349 HM774514 HM774642 HM774682 HM774840 HM774998 HQ704030 HQ704032 HQ704033 HQ704034 AF032360 HM774930 S56184 L03385 Y15773 AJ306670 AY376085 DQ926534 HM994910 HM995374 HM995381 AB063655 AB063669 AB063676 AB063796 AB063804 AB063927 AB066885 AB066886 AB066890 AB066980 AB066983 AB067006 AB067010 AB067016 AB067028 AB067069 AB067083 AB067103 AB067234 AB067266 AB363180 AF174058 AF174062 AJ306669 AJ309318 AM279602 AY376074 AY376080 AY944687 DQ100830 DQ100852 DQ100869 DQ100889 DQ100935 DQ926042 DQ926211 DQ926238 DQ926293 DQ926337 DQ926445 DQ926545 DQ926589 DQ926594 DQ926641 EF177963 EF177965 EU117415 FJ385303 FJ385304 FJ385360 FJ490203 GU570287 GU570291 GU570293 GU570294 HM994902 HM994970 HM994971 HM994973 HM994974 HM994975 HM994976 HM994999 HM995000 HM995001 HM995002 HM995003 HM995005 HM995006 HM995007 HM995008 HM995009 HM995010 HM995011 HM995229 HM995234 HM995240 HM995300 HM995301 HM995302 HM995303 HM995305 HM995350 HM995352 HM995354 HM995372 HM995378 HM995379 HM995382 HM995383 HM995384 HM995385 HM995386 HM995423 HM995430 HM995431 HM995449 HM995453 HM995454 HM995455 HM995458 HM995459 HM995507 HM995509 HM995510 HM995511 HM995575 HM995632 HM995835 HM995836 HM995838 HM995839 HM995840 HM995841 HM995954 HM996284 HM996494 HQ378378 U07985 Z18834 X98899 AB021529 AB021539 AF035796 AF471223 AF471224 AF471226 AF471227 AF471231 AF471235 AF471238 AF471239 AJ239353 AJ245321 AJ579149 AJ579153 AJ579156 AJ579215 AJ579229 AJ617571 AY379733 AY941939 D83676 D83677 DQ225095 DQ535264 DQ535301 DQ535363 DQ535409 DQ535438 DQ535483 EF633755 EF633756 EF633757 EF633758 EF633787 EF633789 EF633790 EF633816 EU835550 EU835551 GU570285 GU570286 HM152494 U00488 U00506 U00546 U00577 U00588 X62968 X62969 X63080 X64239 X73605 X79166 X99360 Z18318 Z33899 Z33901 Z14176 Z14171 AY994080 EU883655 DQ234395 DQ234396 DQ234397 DQ234398 DQ234399 DQ234401 EU883644 EU883645 EU883646 EU883647 EU883648 EU883649 EU883650 EU883651 EU883652 EU883653 EU883654 EU883656 EU883657 EU883658 EU883659 L23565 X53613 Z80840 CU675389 CU676902 BC021276 BC006402 TSC_hg19_v1_chr14_-_106552810 AK097367 AK123546 AK128565 AK128625 AK129508 BX640627	-45992	-	AF028103 AF028108 Z11951 FJ840130 AF460713 AF460734 DQ454527 DQ454388 DQ454699 GQ232866 DQ454529 GQ232862 GQ232892 GU552777 EF407836 AY003841 DQ454714 GU552715 GU552744 DQ454664 DQ454668 DQ454679 DQ454889 DQ523850 AF209741 FJ385398 FJ873853 GU552716 GU552740 FJ840399 FJ840405 FJ873982 FJ840136 FJ840137 FJ840146 FJ873844 FJ873859 FJ873968 AJ008185 AJ008243 DQ454505 AY003713 AY003823 AY003842 EU433861 AF103214 EF441758 AF209733 AF209739 M18511 EU099088 EU099091 EU099108 EU099125 EU099214 DQ100874 AF103360 AF103031 AF103055 AF103172 AF103027 AY062317 HM773987 JN110484 JN110743 JN110870 JN110880 JN110904 JN111065 FJ385409 FJ385427 GQ504866 HM774017 HM774087 HM774308 HM774638 HM774746 HM774912 HM774921 AF032354 AF103227 AF103255 AF082194 EU146316 EU146375 EU146379 EU146381 EU146388 EU146390 EU146391 AJ271553 AJ300806 DQ926562 L38566 AB066857 HM995144 AF035789 AF035799 AF035798 L26034 AF062296 AF062303 AF471268 DQ454900 DQ524054 HM995097 HM995098 HM995245 HM995265 HM995270 HM995272 HM995274 HM995569 HM995686 HM995688 HM995689 HM995690 HM995691 HM995692 HM995930 HM995937 HM995946 HM996125 HM996208 HM996383 HM996458 DQ322777 DQ840774 DQ840820 DQ840842 DQ840897 AJ278771 AY686927 AY866567 AY998725 DQ100923 DQ100931 DQ926186 DQ926328 DQ926496 EF178079 FJ195531 FJ195532 FJ385300 FJ385301 FJ385374 FJ385399 HM995143 L39128 X79165 AB021509 AB021517 AB021528 AB021540 AB063657 AB063800 AB063845 AB066984 AB067025 AB067128 AB363162 AB363202 AB363206 AB373605 AB373606 AB373610 AB373616 AB373630 AB373634 AF021972 AF035026 AF174091 AF471269 AF471270 AF471271 AF471274 AF471276 AF471277 AF471278 AF471279 AJ249632 AJ401163 AJ401164 AJ556720 AJ579094 AJ579101 AJ579115 AJ579140 AJ579160 AJ579180 AJ579219 AJ579227 AJ579235 AJ579263 AJ579275 AJ579285 AJ627238 AY055479 AY376081 AY971142 D83688 D83689 DQ065634 DQ535287 DQ535290 DQ535292 DQ535322 DQ535337 DQ535365 DQ535372 DQ535396 DQ535403 DQ535404 DQ926160 DQ926428 DQ926446 DQ926474 DQ926484 DQ926537 DQ926556 EF028218 EF178024 FJ195520 FJ195538 FJ385323 GU570304 HM152485 HQ689757 U97245 X62954 X62960 X87453 X99364 Y12699 Z18319 Z18322 Z18323 Z75557 Z98737 Z98738 Z98739 Z98740 AJ401161 M34023 L14818 X56523 X56524 AF431053 AF431055 Z14169 AY505570 X81723 X81743 Z14216 Z80843 L29153 L29154 Z14960 M34032 BC065820 BC014667 TSC_hg19_v1_chr14_-_106610847 AK123981 AK301228 AK130434 AK289373	12042	-	U32483 U32956 AF028093 AF028101 AF028111 FN562934 FN562935 FN562936 FN562938 FN562940 FN562941 FN562942 FN562943 FN562969 FN562970 FN562971 FN562972 FN562973 FN562974 FN562976 FN562977 FN562978 FN562979 FN562980 FN562981 FN562982 FN562983 FN564030 AY393108 GU552686 DQ926435 GU552684 GU552688 GU552757 GU552781 GU552690 AY003829 DQ454593 DQ454964 GU552735 FJ839984 FJ873855 FJ873870 FJ873978 FJ874013 HM116198 HM116220 AY003773 AY466515 EF091911 EF175403 EU667600 GQ232801 GQ232810 GQ232870 GQ232884 GQ232937 GQ232940 GU358677 DQ454763 L33029 AB063742 AB063753 AF209885 AJ007326 AY998724 EU099272 AF343408 AM279479 AM279486 AM279587 AM279589 AF103137 AF103300 AF103139 AY640542 HM774290 HM774693 HQ704036 JN111131 JN111139 JN111144 JN111184 JN111186 JN111187 JN111191 JN111197 JN111211 GQ504857 GQ504898 HM774123 HM774196 HM774674 JN110995 AY515008 HM774096 HM774295 HM774432 HM774654 HM774929 JN110663 JN110917 JN110945 JN110948 JN111032 JN111172 L04345 EF177943 FJ385330 FJ385333 FJ385428 HM774077 HM774081 HM774160 HM774325 HM774354 HM774361 HM774528 HM774594 HM774651 HM774665 HM774673 HM774683 HM774694 HM774869 HM774922 HQ704035 AF103230 AF103158 AF103095 AF103101 AF103237 AF103326 DQ926493 DQ097894 DQ097898 EF624133 EF624134 EF624137 EF624139 EU099193 EU146334 EU146384 AF103118 FJ385354 AY393014 EU099058 EU099190 HM995112 AY393019 L12067 L12070 AY393221 AY393225 AY393230 AY393244 AY393245 AY393246 AY393253 AY393261 AY393265 AY393272 AY393339 AY393362 AY393364 AY393494 AY393498 AY393507 AY393512 AY393521 AY393526 AY393527 AY393537 AY393658 AY393663 AY393681 EF177942 EF178122 AY640486 AF022009 AF062293 AF062306 AY685298 AY866751 AY941910 AY941960 DQ100669 DQ100695 DQ100823 DQ101000 DQ523958 GU570214 GU570234 GU570240 GU570244 HM994961 HM995031 HM995113 HM995115 HM995117 HM995118 HM995409 HM995411 HM995412 HM995413 HM995414 HM995415 HM995428 HM995461 HM995728 HM996035 HM996132 HM996228 HM996503 HM996531 HM996549 HQ378367 U64480 AB066989 AB067026 AB363145 AB363159 AY033251 AY033263 AY033264 AY941851 AY941917 DQ065675 DQ065679 DQ065695 DQ926155 DQ926171 DQ926203 DQ926402 DQ926411 DQ926472 DQ926480 DQ926481 DQ926483 DQ926540 DQ926542 DQ926549 EF177954 EF178002 EF178074 EF178082 EU794408 EU794435 FJ195464 FJ195469 FJ195474 FJ385305 FJ385319 FJ385363 FJ385390 FM160411 HQ378352 Z92891 AB063681 AB063682 AB063683 AB063684 AB063688 AB063689 AB063692 AB063693 AB063694 AB063695 AB063696 AB063702 AB063710 AB063718 AB063722 AB063725 AB063737 AB063738 AB063739 AB063746 AB063748 AB063786 AB063788 AB063795 AB063814 AB063816 AB063817 AB063819 AB063820 AB063821 AB063823 AB063825 AB063870 AB063904 AB063923 AB066999 AB067155 AB067156 AB067160 AB067163 AB067165 AB067171 AB067179 AB067302 AB067303 AB067332 AB067397 AF021967 AF021968 AF062199 AF062246 AF115131 AF115132 AF115133 AF115134 AF174092 AF174102 AF174123 AJ239345 AJ293739 AJ293740 AJ413994 AJ414022 AY530314 AY530319 AY971114 DQ065688 DQ100806 DQ926283 DQ926285 DQ926517 GU570230 GU570235 GU570236 GU570237 GU570238 GU570242 HM995881 HQ689758 JN158093 U00500 U00503 U00542 U00589 U64484 U77375 X61647 X91804 Z18832 Z18851 Z46855 DQ535265 DQ535277 DQ535295 DQ535369 DQ535473 EF177949 EF178045 EF178047 EF178059 EF178069 HM995648 HM995649 HM995876 AF026930 AF062147 AF062150 AF062212 AF062265 AF174028 L38435 M28136 X15611 X60504 Z14963 BC073789 BC051319 BC051328 TSC_hg19_v1_chr14_-_106642052 AK301327 AK301389 BC005951 BX640625 BX640626	43267	-	AY885219 X61021 Z14181 S55735 AY003795 DQ454455 DQ454409 AF460804 AF460662 AF460801 DQ454397 DQ100714 DQ523908 GQ232944 GQ232956 GQ232797 DQ840786 GQ232980 DQ454544 AY003853 DQ454479 DQ454535 DQ454792 DQ454854 DQ523849 DQ523895 GQ232770 GQ232955 DQ454396 DQ454585 DQ454631 DQ454654 DQ454956 DQ523905 GQ232836 AY003731 AY003716 AY003784 DQ454389 DQ454410 DQ454413 DQ454468 DQ454520 DQ454542 DQ454636 DQ454958 DQ454970 DQ523897 GQ232858 DQ454415 DQ454603 DQ454652 DQ454660 DQ454905 DQ454967 DQ454973 DQ523880 FJ694878 GQ232876 EF407825 EF407842 FJ840131 Z11947 FJ840333 FJ840335 FJ873821 FJ873823 FJ873828 FJ873833 FJ873836 FJ873860 FJ873862 FJ873874 FJ873877 FJ873883 FJ873914 FJ873942 FJ873962 FJ873970 FJ873987 FJ873990 FJ873992 FJ874005 FJ874027 FJ874036 FJ874038 FJ874063 FJ874086 AJ008226 DQ001066 AJ487489 EF091900 EF091901 EF091902 EF175385 EF407838 EF407845 EU814964 FJ694872 JF810262 JF810268 AY393066 AF209735 EU099104 EU099065 EU099101 EU099149 EU099151 EU099184 HM774293 EU099140 EU099070 EU099084 AF158380 EU099130 EU099206 EU099239 EU099243 EU099258 DQ118258 EU090051 DQ524167 EU099262 AF343414 DQ097900 EF555587 EU619977 AF103077 AF103170 AM279610 HM774182 U63212 HM995125 AF035793 AF103329 AF103330 AF103112 AF103182 AJ239379 EF555588 TSC_hg19_v1_chr14_-_106691939 HM774712 HM774761 JN110464 JN110738 JN110826 JN110827 JN110839 JN110903 JN110961 JN110967 JN111019 JN111020 JN111030 JN111035 JN111063 JN111100 JN111115 JN111156 L04329 GQ504855 GQ504939 GQ504944 GQ504967 HM774165 HM774369 HM774525 HM774602 HM774676 HM774690 HM774752 HM774770 HM774773 HM774906 HM775035 HM775044 HQ703986 HQ703987 HQ703995 HQ704026 L26905 L33025 AF103232 JN110697 AF032350 AF032352 AF103105 AJ239387 HM774240 Y14934 Y14935 Y14942 AF103145 EF624220 EU146314 EU146319 EU146378 AB266092 HM996466 DQ100899 AY423192 EF633794 EF633821 HM996470 HM996128 HM995111 AB027443 AF471507 DQ100917 DQ431609 U00572 DQ100693 DQ100840 DQ187606 DQ431612 DQ431613 DQ454842 DQ523995 DQ523997 DQ524047 DQ524062 EF633795 EF633796 HM995012 HM995014 HM995015 HM995084 HM995085 HM995086 HM995089 HM995091 HM995099 HM995100 HM995101 HM995102 HM995103 HM995104 HM995105 HM995106 HM995107 HM995108 HM995109 HM995110 HM995146 HM995147 HM995181 HM995188 HM995201 HM995278 HM995279 HM995280 HM995282 HM995284 HM995285 HM995292 HM995392 HM995530 HM995634 HM995888 HM995892 HM996033 HM996054 HM996072 HM996116 HM996119 HM996127 HM996149 HM996152 HM996173 HM996175 HM996181 HM996217 HM996257 HM996264 HM996267 HM996277 HM996341 HM996536 HM996544 DQ187628 DQ322746 DQ322747 DQ322768 DQ323029 DQ323030 DQ840720 DQ840783 DQ840784 DQ840785 DQ840787 DQ840788 DQ840789 DQ840790 DQ840792 DQ840793 DQ840794 DQ840795 DQ840796 DQ840797 DQ840817 DQ840822 DQ840837 AB453230 AJ245260 AY781807 AY866546 AY866968 AY941949 DQ005279 DQ100697 DQ100798 DQ100815 DQ100893 DQ100898 DQ100901 DQ100925 DQ100947 DQ926257 DQ926305 DQ926590 HQ378339 L19904 U21270 AB063691 AB063759 AB063908 AB066881 AB066972 AB066974 AB066976 AB066979 AB067033 AB363081 AB453231 AF044445 AF052523 AF062162 AF408719 AF455550 AF460967 AF471211 AJ001171 AJ243108 AJ271554 AJ389178 AJ389193 AJ519292 AJ555251 AJ555252 AY033254 AY033285 AY055481 AY466506 AY553643 AY553648 AY577302 AY685252 AY685253 AY846272 AY866763 AY866786 D83686 DQ005290 DQ065626 DQ065630 DQ065668 DQ065694 DQ065704 DQ212512 DQ431611 DQ535452 DQ840743 DQ840747 DQ840748 DQ840749 DQ840750 DQ840751 DQ840752 DQ840812 DQ926167 EF177948 EF177958 EF177959 EF633763 EF633764 EF633797 FJ039786 FJ039789 FJ385383 FJ481087 FJ492943 GU570307 HM152488 HM152500 HM152517 HM152520 HQ689728 S73912 U00508 U06787 U64497 U77372 X99354 Z18317 Z18324 L26898 AJ519295 HM995778 HM995962 AJ519313 HM995777 HM995779 HM995832 HM995882 HM995893 HM995902 HM995903 HM995904 HM995905	93285	-	BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AL389978|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BC090940|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073758|IGHM|3507|immunoglobulin heavy constant mu##AK097320|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125582|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130539|IGHM|3507|immunoglobulin heavy constant mu##AK130586|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130844|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301403|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC021276|IGHD|3495|immunoglobulin heavy constant delta##BC006402|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097367|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123546|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128565|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128625|IGHD|3495|immunoglobulin heavy constant delta##AK129508|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640627|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC065820|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC014667|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130434|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073789|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC051328|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK301327|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301389|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC005951|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640625|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BX640626|IGHA1|3493|immunoglobulin heavy constant alpha 1	4.349325	CTCF.p2:-11:0.629	CTCF.p2:34:0.998	CTCF.p2:-68:0.999	CTCF.p2:97:0.998	CTCF.p2:-106:0.725
chr3	196669278	196669398	reg1021464.p1	6.132	+	AK093216 AK297506 TSC_hg19_v1_chr3_-_196669320	-47	-	TSC_hg19_v1_chr3_+_196594770 BC030705	-74568	+	TSC_hg19_v1_chr3_+_196594754 AK302305 NM_152699 AK313764	-74606	+	AB528874 BT006842 CU674628 TSC_hg19_v1_chr3_-_196669398 DQ890703 DQ893887 AY644767 BX647994 D59253 BC001255 X84157 AK296144 AK316601 BX537372 NM_001042540 NM_007362 AK308192	82	-	TSC_hg19_v1_chr3_+_196669529 BC062368 AK123020	172	+	TSC_hg19_v1_chr3_+_196669559 AL832915 BC000257 BC007882	233	+	AK093216|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AK297506|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##BC030705|SENP5|205564|SUMO1/sentrin specific peptidase 5##AK302305|SENP5|205564|SUMO1/sentrin specific peptidase 5##NM_152699|SENP5|205564|SUMO1/sentrin specific peptidase 5##AK313764|SENP5|205564|SUMO1/sentrin specific peptidase 5##BT006842|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##DQ890703|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##DQ893887|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AY644767|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##BX647994|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##D59253|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##BC001255|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##X84157|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AK296144|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AK316601|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##BX537372|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##NM_001042540|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##NM_007362|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AK308192|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##BC062368|LOC152217|152217|uncharacterized LOC152217##AK123020|LOC152217|152217|uncharacterized LOC152217##AL832915|LOC152217|152217|uncharacterized LOC152217##BC000257|LOC152217|152217|uncharacterized LOC152217##BC007882|LOC152217|152217|uncharacterized LOC152217	0.224538	CTCF.p2:20:0.225
chr5	44774530	44774644	reg1023771.p1	6.132	+	AF508782 AB002097 AF411527 BC069561 CR541665 CR541688 GQ351295 HQ258011 NM_004465 U67918 BC105023 BC105021 BC143772	-385822	-	Z50101 AB385177 AM392664 AM393615 TSC_hg19_v1_chr5_+_43609371	-1165271	+	TSC_hg19_v1_chr5_+_43603313 BC110543 BC110544	-1171233	+	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	34440	+	AF064876 TSC_hg19_v1_chr5_-_45695947	921304	-	AF488549 NM_021072	921632	-	AF508782|FGF10|2255|fibroblast growth factor 10##AB002097|FGF10|2255|fibroblast growth factor 10##AF411527|FGF10|2255|fibroblast growth factor 10##BC069561|FGF10|2255|fibroblast growth factor 10##CR541665|FGF10|2255|fibroblast growth factor 10##CR541688|FGF10|2255|fibroblast growth factor 10##GQ351295|FGF10|2255|fibroblast growth factor 10##HQ258011|FGF10|2255|fibroblast growth factor 10##NM_004465|FGF10|2255|fibroblast growth factor 10##U67918|FGF10|2255|fibroblast growth factor 10##BC105023|FGF10|2255|fibroblast growth factor 10##BC105021|FGF10|2255|fibroblast growth factor 10##Z50101|NNT|23530|nicotinamide nucleotide transhydrogenase##AM392664|NNT|23530|nicotinamide nucleotide transhydrogenase##AM393615|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110543|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110544|NNT|23530|nicotinamide nucleotide transhydrogenase##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1	0.963589	CTCF.p2:5:0.964
chr6	53851116	53851237	reg1023958.p2	6.132	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	-191245	+	TSC_hg19_v1_chr6_+_53659776 BC003193 NM_018214	-191417	+	TSC_hg19_v1_chr6_+_53659294 AK021896	-191876	+	NM_138569 BX647567 AK055530	32574	+	BC070278 NM_014464 AK312918 BC056235 AB022277 AF195116 AF195117 CU687080 CU691132 EU832329 EU832414	322099	+	AK055204 NM_001010872 BC101628 BC112275	860412	+	AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1##BC003193|LRRC1|55227|leucine rich repeat containing 1##NM_018214|LRRC1|55227|leucine rich repeat containing 1##AK021896|LRRC1|55227|leucine rich repeat containing 1##NM_138569|MLIP|90523|muscular LMNA-interacting protein##BX647567|MLIP|90523|muscular LMNA-interacting protein##AK055530|MLIP|90523|muscular LMNA-interacting protein##BC070278|TINAG|27283|tubulointerstitial nephritis antigen##NM_014464|TINAG|27283|tubulointerstitial nephritis antigen##AK312918|TINAG|27283|tubulointerstitial nephritis antigen##BC056235|TINAG|27283|tubulointerstitial nephritis antigen##AB022277|TINAG|27283|tubulointerstitial nephritis antigen##AF195116|TINAG|27283|tubulointerstitial nephritis antigen##AF195117|TINAG|27283|tubulointerstitial nephritis antigen##EU832329|TINAG|27283|tubulointerstitial nephritis antigen##EU832414|TINAG|27283|tubulointerstitial nephritis antigen##AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B	0.965269	CTCF.p2:-28:0.965
chr8	62704725	62704847	reg1024069.p1	6.132	+	TSC_hg19_v1_chr8_-_62627167 NM_001164754 NM_001164755 NM_001164756 NM_004318 NM_032466	-77597	-	TSC_hg19_v1_chr8_-_62627152 BC015518 BC025236 AK298577	-77648	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	-77768	-	TSC_hg19_v1_chr8_+_63161185 AK299689	456420	+	TSC_hg19_v1_chr8_+_63161499 AK096949 NM_173688 AX721226 AB463913	456778	+	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	1246612	-	NM_001164754|ASPH|444|aspartate beta-hydroxylase##NM_001164755|ASPH|444|aspartate beta-hydroxylase##NM_001164756|ASPH|444|aspartate beta-hydroxylase##NM_004318|ASPH|444|aspartate beta-hydroxylase##NM_032466|ASPH|444|aspartate beta-hydroxylase##BC015518|ASPH|444|aspartate beta-hydroxylase##BC025236|ASPH|444|aspartate beta-hydroxylase##AK298577|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase##AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)	0.166531	
chrX	45703110	45703216	reg1023946.p2	6.132	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	-643050	-	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-970727	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-999850	+	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	603548	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	701693	-	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	701781	+	BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588	0.702484	CTCF.p2:-1:0.702
chr1	40283139	40283320	reg1002397.p4	6.131	+	TSC_hg19_v1_chr1_-_40254528 AY303955 NM_001720	-28703	-	TSC_hg19_v1_chr1_-_40254516 BC108678	-28714	-	BC023526 TSC_hg19_v1_chr1_-_40254233	-29040	-	AY702933 AY702934 AY702935 AY702936 AY702937 AY702938 AY702939 AY702940 AY702941 AY702942 AY702943 AY702944 AY702945 AY702946 AY702947 TSC_hg19_v1_chr1_-_40349138 AY052768 BC010741	65895	-	AK296453 AK307910 TSC_hg19_v1_chr1_-_40349167	65938	-	TSC_hg19_v1_chr1_-_40349179 AK223478 AK304759 AY303390 BC128155 BC128156 NM_017646 BC107569	65945	-	AY303955|BMP8B|656|bone morphogenetic protein 8b##NM_001720|BMP8B|656|bone morphogenetic protein 8b##BC108678|BMP8B|656|bone morphogenetic protein 8b##BC023526|BMP8B|656|bone morphogenetic protein 8b##AY702933|TRIT1|54802|tRNA isopentenyltransferase 1##AY702934|TRIT1|54802|tRNA isopentenyltransferase 1##AY702935|TRIT1|54802|tRNA isopentenyltransferase 1##AY702936|TRIT1|54802|tRNA isopentenyltransferase 1##AY702937|TRIT1|54802|tRNA isopentenyltransferase 1##AY702938|TRIT1|54802|tRNA isopentenyltransferase 1##AY702939|TRIT1|54802|tRNA isopentenyltransferase 1##AY702940|TRIT1|54802|tRNA isopentenyltransferase 1##AY702941|TRIT1|54802|tRNA isopentenyltransferase 1##AY702942|TRIT1|54802|tRNA isopentenyltransferase 1##AY702943|TRIT1|54802|tRNA isopentenyltransferase 1##AY702944|TRIT1|54802|tRNA isopentenyltransferase 1##AY702945|TRIT1|54802|tRNA isopentenyltransferase 1##AY702946|TRIT1|54802|tRNA isopentenyltransferase 1##AY702947|TRIT1|54802|tRNA isopentenyltransferase 1##AY052768|TRIT1|54802|tRNA isopentenyltransferase 1##BC010741|TRIT1|54802|tRNA isopentenyltransferase 1##AK296453|TRIT1|54802|tRNA isopentenyltransferase 1##AK307910|TRIT1|54802|tRNA isopentenyltransferase 1##AK223478|TRIT1|54802|tRNA isopentenyltransferase 1##AK304759|TRIT1|54802|tRNA isopentenyltransferase 1##AY303390|TRIT1|54802|tRNA isopentenyltransferase 1##BC128155|TRIT1|54802|tRNA isopentenyltransferase 1##BC128156|TRIT1|54802|tRNA isopentenyltransferase 1##NM_017646|TRIT1|54802|tRNA isopentenyltransferase 1##BC107569|TRIT1|54802|tRNA isopentenyltransferase 1	0.0	
chr17	66432199	66432379	reg1006335.p1	6.131	+	AX750577 AX750581 U79745 AK313121 AK290417 BC064832 NM_001174166 NM_004694	-144959	-	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	-176955	+	TSC_hg19_v1_chr17_+_66244233 AF208856	-188046	+	AY691424 CU691786 TSC_hg19_v1_chr17_-_66453638 BC039867 AK301830 AK000917 NM_017983	21322	-	TSC_hg19_v1_chr17_+_66508140 NM_212471 Y07642	75834	+	TSC_hg19_v1_chr17_+_66508161 BC093042	75877	+	AX750581|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G##AY691424|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##BC039867|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK301830|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK000917|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_017983|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_212471|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##Y07642|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC093042|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	0.083622	
chr4	181072121	181072225	reg1020290.p1	6.131	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-2708530	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-2708580	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-2708632	-	TSC_hg19_v1_chr4_+_183065111 AK308489	1992952	+	NM_001080477 HE578284 HE578285	2172981	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	2766357	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.070471	
chr3	82546450	82546567	reg1023869.p2	6.130	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-511206	+	TSC_hg19_v1_chr3_-_81810971 NM_000158	-735566	-	TSC_hg19_v1_chr3_-_81810866 AB209731 BC012098	-735660	-	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	2461621	+	AF538973 NM_153184	3229123	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	4493743	-	NM_000158|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB209731|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##BC012098|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)	0.904319	CTCF.p2:-2:0.904
chr10	62528686	62528797	reg1022787.p1	6.129	+	TSC_hg19_v1_chr10_-_62493282 NM_001204403	-35457	-	EU832293 EU832377 AK172736 BX537917 TSC_hg19_v1_chr10_-_62493273 BX648574	-35564	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	-196051	-	NM_001170406 AK295741 NM_001170407 NM_001786 NM_033379 X05360 Y00272 TSC_hg19_v1_chr10_+_62538235	9422	+	TSC_hg19_v1_chr10_+_62538253 BC107750 AK291939	9530	+	BC041791 AB018283 BC032848 TSC_hg19_v1_chr10_-_62704033 NM_001242359 NM_014836 AK307630	175211	-	NM_001204403|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832293|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832377|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX537917|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX648574|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001170406|CDK1|983|cyclin-dependent kinase 1##AK295741|CDK1|983|cyclin-dependent kinase 1##NM_001170407|CDK1|983|cyclin-dependent kinase 1##NM_001786|CDK1|983|cyclin-dependent kinase 1##NM_033379|CDK1|983|cyclin-dependent kinase 1##X05360|CDK1|983|cyclin-dependent kinase 1##Y00272|CDK1|983|cyclin-dependent kinase 1##BC107750|CDK1|983|cyclin-dependent kinase 1##AK291939|CDK1|983|cyclin-dependent kinase 1##BC041791|RHOBTB1|9886|Rho-related BTB domain containing 1##AB018283|RHOBTB1|9886|Rho-related BTB domain containing 1##BC032848|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_001242359|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_014836|RHOBTB1|9886|Rho-related BTB domain containing 1##AK307630|RHOBTB1|9886|Rho-related BTB domain containing 1	0.974718	CTCF.p2:23:0.975
chr11	64535304	64535451	reg1024184.p1	6.129	+	NM_001164716 NM_005609	-7191	-	AF066859 HQ258678 AK314474 BC029305 AK056607 AK299376 AK299461 TSC_hg19_v1_chr11_-_64527447	-7969	-	BC117151 AF043722 AF043723 NM_153819 Y12336	-22451	-	AK293753 NM_001178031	9854	-	CU675923 EU832634 EU832710 AB489174 TSC_hg19_v1_chr11_-_64545887 Y08765	10507	-	TSC_hg19_v1_chr11_-_64545954 BC038446 NM_001178030	10567	-	NM_001164716|PYGM|5837|phosphorylase, glycogen, muscle##NM_005609|PYGM|5837|phosphorylase, glycogen, muscle##AF066859|PYGM|5837|phosphorylase, glycogen, muscle##HQ258678|PYGM|5837|phosphorylase, glycogen, muscle##AK314474|PYGM|5837|phosphorylase, glycogen, muscle##BC029305|PYGM|5837|phosphorylase, glycogen, muscle##AK056607|PYGM|5837|phosphorylase, glycogen, muscle##AK299376|PYGM|5837|phosphorylase, glycogen, muscle##AK299461|PYGM|5837|phosphorylase, glycogen, muscle##BC117151|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AF043722|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AF043723|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##NM_153819|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##Y12336|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AK293753|SF1|7536|splicing factor 1##NM_001178031|SF1|7536|splicing factor 1##EU832634|SF1|7536|splicing factor 1##EU832710|SF1|7536|splicing factor 1##Y08765|SF1|7536|splicing factor 1##BC038446|SF1|7536|splicing factor 1##NM_001178030|SF1|7536|splicing factor 1	0.928243	CTCF.p2:-17:0.928
chr12	91755692	91755814	reg1019639.p1	6.129	+	NM_001920	-178948	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-179173	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-182442	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	783890	-	AJ845165 AJ845166 NM_001025233	1061981	+	AJ845168 NM_001025232	1066170	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.747929	CTCF.p2:-12:0.748
chr19	46580980	46581106	reg1019013.p1	6.129	+	AY672114 NM_001002923	-36770	-	NM_005091	-54488	-	TSC_hg19_v1_chr19_+_46498724 GQ375050	-82316	+	HQ258051 BC130593 BC130597 AY358434 AY672113 NM_207393	46878	-	AY672112 NM_001002915	69995	+	AY358692 NM_001135113	70456	+	AY672114|IGFL4|444882|IGF-like family member 4##NM_001002923|IGFL4|444882|IGF-like family member 4##NM_005091|PGLYRP1|8993|peptidoglycan recognition protein 1##GQ375050|CCDC61|729440|coiled-coil domain containing 61##HQ258051|IGFL3|388555|IGF-like family member 3##BC130593|IGFL3|388555|IGF-like family member 3##BC130597|IGFL3|388555|IGF-like family member 3##AY358434|IGFL3|388555|IGF-like family member 3##AY672113|IGFL3|388555|IGF-like family member 3##NM_207393|IGFL3|388555|IGF-like family member 3##AY672112|IGFL2|147920|IGF-like family member 2##NM_001002915|IGFL2|147920|IGF-like family member 2##AY358692|IGFL2|147920|IGF-like family member 2##NM_001135113|IGFL2|147920|IGF-like family member 2	0.764327	CTCF.p2:16:0.672
chr3	30054552	30054699	reg1023997.p1	6.129	+	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	-731661	+	NM_001040432	-1622639	+	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	-1664064	-	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	593397	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	593778	+	AL832766 NM_207359	881527	-	NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1	0.99783	CTCF.p2:-6:0.998
chr19	43389172	43389277	reg1023216.p2	6.128	+	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	-5399	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	-119400	-	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	-144623	-	CU676604 DQ893114 DQ896388 M31125 M33666 NM_002782 X17098 BC020652 NM_001031850	32769	-	BC136401 U18467 BC030979 AK309898 NM_001206650 NM_002783	52065	-	CU676656 M69245 U25988 BC020711 NM_001113410 NM_002785 NM_203287	141362	-	CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ893114|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##DQ896388|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M31125|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M33666|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_002782|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##X17098|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC020652|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_001031850|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC136401|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##U18467|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##BC030979|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_001206650|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_002783|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##M69245|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##U25988|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##BC020711|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_001113410|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_002785|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_203287|PSG11|5680|pregnancy specific beta-1-glycoprotein 11	0.654396	CTCF.p2:16:0.654
chr7	73684369	73684504	reg1023643.p2	6.128	+	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	-15700	-	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	-15725	-	TSC_hg19_v1_chr7_+_73624361 AF252613	-60082	+	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	19351	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	183728	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	183872	+	NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AF252613|LAT2|7462|linker for activation of T cells family, member 2##AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1	0.14835	
chr10	18762023	18762171	reg1022239.p2	6.127	+	NM_201570 AK299873 AK295113	-72534	+	AK310943 NM_201590	-132484	+	NM_000724 AB208917 U95019	-212457	+	AK074323 BC035778 NM_182543	178435	-	BC033534 TSC_hg19_v1_chr10_-_18948215	186100	-	TSC_hg19_v1_chr10_+_18948359 NM_178815 BC024163 AK027275 AF494061 DQ893166 DQ896464	186324	+	NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK310943|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201590|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK074323|NSUN6|221078|NOP2/Sun domain family, member 6##BC035778|NSUN6|221078|NOP2/Sun domain family, member 6##NM_182543|NSUN6|221078|NOP2/Sun domain family, member 6##NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B##BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B##AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B##AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B	0.829359	CTCF.p2:-5:0.829
chr4	154707080	154707214	reg1023240.p2	6.127	+	BC034385 NM_173662	-25761	-	TSC_hg19_v1_chr4_-_154681150 AK091509 AX747029	-25991	-	CU689874 TSC_hg19_v1_chr4_-_154681121	-26076	-	BC008666 AK075372 AK093922 TSC_hg19_v1_chr4_-_154710236 AF311912 NM_003013	3077	-	AY354497 NM_017639	605301	-	TSC_hg19_v1_chr4_-_155412411 AY354498 BC140919	705335	-	BC034385|RNF175|285533|ring finger protein 175##NM_173662|RNF175|285533|ring finger protein 175##AK091509|RNF175|285533|ring finger protein 175##BC008666|SFRP2|6423|secreted frizzled-related protein 2##AK075372|SFRP2|6423|secreted frizzled-related protein 2##AK093922|SFRP2|6423|secreted frizzled-related protein 2##AF311912|SFRP2|6423|secreted frizzled-related protein 2##NM_003013|SFRP2|6423|secreted frizzled-related protein 2##AY354497|DCHS2|54798|dachsous 2 (Drosophila)##NM_017639|DCHS2|54798|dachsous 2 (Drosophila)##AY354498|DCHS2|54798|dachsous 2 (Drosophila)##BC140919|DCHS2|54798|dachsous 2 (Drosophila)	0.07074	
chr6	101105691	101105832	reg1022075.p1	6.127	+	NM_005068 U70212	-194211	-	AK123634 NM_001040179 NM_032503 AF347063	-663651	-	AY004253 NM_021620	-1051112	+	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	223339	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	223455	-	TSC_hg19_v1_chr6_-_101329241 BC026066 AK299117	223482	-	NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC026066|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK299117|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	1.794389	CTCF.p2:-15:0.885	CTCF.p2:29:0.910
chr17	35577599	35577713	reg1021722.p1	6.126	+	AK057229 NM_012138 TSC_hg19_v1_chr17_+_35306253 AF083208 BC000591 AJ249940 AB385572 CU674286 DQ892097 DQ895290	-271357	+	BC020470 NM_005568	-282885	+	BC084573 TSC_hg19_v1_chr17_-_35293961	-283716	-	AY315619 AY315620 NM_198837 NM_198838	79035	-	TSC_hg19_v1_chr17_-_35716040 AB371587 AK309084 AY315621 AY315622 NM_198836	138396	-	AK096966 BC034672 NM_173625 CU689930	155324	+	AK057229|AATF|26574|apoptosis antagonizing transcription factor##NM_012138|AATF|26574|apoptosis antagonizing transcription factor##AF083208|AATF|26574|apoptosis antagonizing transcription factor##BC000591|AATF|26574|apoptosis antagonizing transcription factor##AJ249940|AATF|26574|apoptosis antagonizing transcription factor##DQ892097|AATF|26574|apoptosis antagonizing transcription factor##DQ895290|AATF|26574|apoptosis antagonizing transcription factor##BC020470|LHX1|3975|LIM homeobox 1##NM_005568|LHX1|3975|LIM homeobox 1##AY315619|ACACA|31|acetyl-CoA carboxylase alpha##AY315620|ACACA|31|acetyl-CoA carboxylase alpha##NM_198837|ACACA|31|acetyl-CoA carboxylase alpha##NM_198838|ACACA|31|acetyl-CoA carboxylase alpha##AB371587|ACACA|31|acetyl-CoA carboxylase alpha##AK309084|ACACA|31|acetyl-CoA carboxylase alpha##AY315621|ACACA|31|acetyl-CoA carboxylase alpha##AY315622|ACACA|31|acetyl-CoA carboxylase alpha##NM_198836|ACACA|31|acetyl-CoA carboxylase alpha##AK096966|C17orf78|284099|chromosome 17 open reading frame 78##BC034672|C17orf78|284099|chromosome 17 open reading frame 78##NM_173625|C17orf78|284099|chromosome 17 open reading frame 78	1.351058	CTCF.p2:-6:0.882	CTCF.p2:14:0.469
chr18	46764956	46765051	reg1023965.p1	6.126	+	AF010193 NM_001190821 NM_005904	-287923	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	-288236	-	AK301535 NM_001190822	-289301	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	222048	-	TSC_hg19_v1_chr18_-_47013575 AB097012	248562	-	TSC_hg19_v1_chr18_-_47013599 BC093004	248596	-	AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin##AB097012|C18orf32|497661|chromosome 18 open reading frame 32##BC093004|C18orf32|497661|chromosome 18 open reading frame 32	0.0	
chr4	184642566	184642708	reg1025643.p1	6.126	+	TSC_hg19_v1_chr4_+_184580539 BC139745	-62126	+	NM_021942 NM_199053 TSC_hg19_v1_chr4_+_184580445 AL833571 AK096345 BX648499 BX647127 BX538044 BC040530 BC051724	-62188	+	CU688324 BC107432 TSC_hg19_v1_chr4_-_184580305 AK021702 AK293274 AK315515 BC017472 BC067752 NM_152682	-62395	-	TSC_hg19_v1_chr4_+_184826513 AB037813 BC146754 NM_020225	183869	+	TSC_hg19_v1_chr4_+_184827807 AK289840	185183	+	TSC_hg19_v1_chr4_+_184827885 AB384196	185274	+	BC139745|C4orf41|60684|chromosome 4 open reading frame 41##NM_021942|C4orf41|60684|chromosome 4 open reading frame 41##NM_199053|C4orf41|60684|chromosome 4 open reading frame 41##AL833571|C4orf41|60684|chromosome 4 open reading frame 41##AK096345|C4orf41|60684|chromosome 4 open reading frame 41##BX648499|C4orf41|60684|chromosome 4 open reading frame 41##BX647127|C4orf41|60684|chromosome 4 open reading frame 41##BX538044|C4orf41|60684|chromosome 4 open reading frame 41##BC040530|C4orf41|60684|chromosome 4 open reading frame 41##BC051724|C4orf41|60684|chromosome 4 open reading frame 41##BC107432|RWDD4|201965|RWD domain containing 4##AK021702|RWDD4|201965|RWD domain containing 4##AK293274|RWDD4|201965|RWD domain containing 4##AK315515|RWDD4|201965|RWD domain containing 4##BC017472|RWDD4|201965|RWD domain containing 4##BC067752|RWDD4|201965|RWD domain containing 4##NM_152682|RWDD4|201965|RWD domain containing 4##AB037813|STOX2|56977|storkhead box 2##BC146754|STOX2|56977|storkhead box 2##NM_020225|STOX2|56977|storkhead box 2##AK289840|STOX2|56977|storkhead box 2	0.036953	
chrX	105863178	105863304	reg1023777.p1	6.126	+	NM_001184782 NM_018015 TSC_hg19_v1_chrX_+_105855208 BC047503 AK001040 BC070110 AK291730 BC011483 BC033709 BC054032 CU687040 CU689708	-8007	+	BC031229 NM_001171020 NM_152423	-450944	+	TSC_hg19_v1_chrX_-_105282719 AK310778 NM_000354	-580512	-	BC036901 NM_024539 AK126553	73834	+	TSC_hg19_v1_chrX_+_105969932 AK074264 NM_194463 BC063404 AF394689 CU687692	106767	+	TSC_hg19_v1_chrX_+_106045925 AK123957 NM_017752 NM_198881 BC122564 BX648230 AB449890 AB449891	182740	+	NM_001184782|CXorf57|55086|chromosome X open reading frame 57##NM_018015|CXorf57|55086|chromosome X open reading frame 57##BC047503|CXorf57|55086|chromosome X open reading frame 57##AK001040|CXorf57|55086|chromosome X open reading frame 57##BC070110|CXorf57|55086|chromosome X open reading frame 57##AK291730|CXorf57|55086|chromosome X open reading frame 57##BC011483|CXorf57|55086|chromosome X open reading frame 57##BC033709|CXorf57|55086|chromosome X open reading frame 57##BC054032|CXorf57|55086|chromosome X open reading frame 57##BC031229|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_001171020|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_152423|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##BC036901|RNF128|79589|ring finger protein 128##NM_024539|RNF128|79589|ring finger protein 128##AK126553|RNF128|79589|ring finger protein 128##AK074264|RNF128|79589|ring finger protein 128##NM_194463|RNF128|79589|ring finger protein 128##BC063404|RNF128|79589|ring finger protein 128##AF394689|RNF128|79589|ring finger protein 128##AK123957|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_017752|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_198881|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BC122564|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BX648230|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449890|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449891|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)	0.038019	
chr1	60368983	60369097	reg1023443.p1	6.125	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	-88388	+	NM_001244714 AK054842	-593287	+	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	-606428	+	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	23345	-	BC032594 TSC_hg19_v1_chr1_-_60392478	23429	-	BC027878 AK124828 NM_152377	170393	-	AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##BC027878|C1orf87|127795|chromosome 1 open reading frame 87##AK124828|C1orf87|127795|chromosome 1 open reading frame 87##NM_152377|C1orf87|127795|chromosome 1 open reading frame 87	0.60238	CTCF.p2:-20:0.602
chr19	46513112	46513234	reg1023650.p2	6.125	+	TSC_hg19_v1_chr19_+_46498724 GQ375050	-14446	+	NM_001080402	-14835	+	TSC_hg19_v1_chr19_-_46476556 U70477 AF083898 NM_002516	-36567	-	NM_005091	13382	-	AY672114 NM_001002923	31100	-	HQ258051 BC130593 BC130597 AY358434 AY672113 NM_207393	114748	-	GQ375050|CCDC61|729440|coiled-coil domain containing 61##NM_001080402|CCDC61|729440|coiled-coil domain containing 61##U70477|NOVA2|4858|neuro-oncological ventral antigen 2##AF083898|NOVA2|4858|neuro-oncological ventral antigen 2##NM_002516|NOVA2|4858|neuro-oncological ventral antigen 2##NM_005091|PGLYRP1|8993|peptidoglycan recognition protein 1##AY672114|IGFL4|444882|IGF-like family member 4##NM_001002923|IGFL4|444882|IGF-like family member 4##HQ258051|IGFL3|388555|IGF-like family member 3##BC130593|IGFL3|388555|IGF-like family member 3##BC130597|IGFL3|388555|IGF-like family member 3##AY358434|IGFL3|388555|IGF-like family member 3##AY672113|IGFL3|388555|IGF-like family member 3##NM_207393|IGFL3|388555|IGF-like family member 3	0.999632	CTCF.p2:8:1.000
chr5	132825425	132825559	reg1023530.p1	6.125	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-392601	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-397089	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-419389	+	TSC_hg19_v1_chr5_-_132948202 AK055684	122707	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	122746	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	478883	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.0	
chr5	23994784	23994886	reg1024290.p1	6.125	+	DQ388610 NM_020227 AK301776	-487092	+	L33477 NM_004061	-1141105	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-1141389	-	NM_006727	650249	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	3043836	-	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	3477568	+	DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401	0.950538	CTCF.p2:4:0.951
chr7	21565781	21565893	reg1022648.p1	6.125	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-97513	+	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	-98018	+	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	-739303	-	AJ320497 NM_003777	16995	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	419645	-	AL833195 NM_012294	830684	-	AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5	0.302041	CTCF.p2:-5:0.302
chr7	6992918	6993036	reg1025142.p1	6.125	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-127079	-	AK296026 CU679629 AK000993 TSC_hg19_v1_chr7_-_6865849	-127139	-	AK314983 BC034495 NM_001099697 NM_173565	-199238	+	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	229270	+	BC136892 BC144431 AJ890451 NM_001037763	582477	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	613611	+	BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK296026|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK000993|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)	0.0	
chrX	49020147	49020254	reg1022401.p1	6.125	+	BC067800 NM_001099681 NM_001099682 NM_024859 BC027995	-1005	+	AB209806 CU674194 BC000397 BC003148 NM_015698 TSC_hg19_v1_chrX_-_48980086 AK310728 U66359	-40100	-	TSC_hg19_v1_chrX_-_48958083 BC069206 NM_007075	-62108	-	TSC_hg19_v1_chrX_+_49020239 AK025340 AK094251 NM_001099680	54	+	NM_002668 TSC_hg19_v1_chrX_+_49028254 L09604 BC109066 AB591027	8063	+	TSC_hg19_v1_chrX_-_49042840 BT007423 CR457211 DQ891474 DQ894662 AB464065 AJ011654 NM_006150 AK300866 AK314788 BC002468 BC016856	22590	-	BC067800|MAGIX|79917|MAGI family member, X-linked##NM_001099681|MAGIX|79917|MAGI family member, X-linked##NM_001099682|MAGIX|79917|MAGI family member, X-linked##NM_024859|MAGIX|79917|MAGI family member, X-linked##BC027995|MAGIX|79917|MAGI family member, X-linked##AB209806|GPKOW|27238|G patch domain and KOW motifs##BC000397|GPKOW|27238|G patch domain and KOW motifs##BC003148|GPKOW|27238|G patch domain and KOW motifs##NM_015698|GPKOW|27238|G patch domain and KOW motifs##U66359|GPKOW|27238|G patch domain and KOW motifs##BC069206|WDR45|11152|WD repeat domain 45##NM_007075|WDR45|11152|WD repeat domain 45##AK025340|MAGIX|79917|MAGI family member, X-linked##AK094251|MAGIX|79917|MAGI family member, X-linked##NM_001099680|MAGIX|79917|MAGI family member, X-linked##NM_002668|PLP2|5355|proteolipid protein 2 (colonic epithelium-enriched)##L09604|PLP2|5355|proteolipid protein 2 (colonic epithelium-enriched)##BC109066|PLP2|5355|proteolipid protein 2 (colonic epithelium-enriched)##BT007423|PRICKLE3|4007|prickle homolog 3 (Drosophila)##CR457211|PRICKLE3|4007|prickle homolog 3 (Drosophila)##DQ891474|PRICKLE3|4007|prickle homolog 3 (Drosophila)##DQ894662|PRICKLE3|4007|prickle homolog 3 (Drosophila)##AJ011654|PRICKLE3|4007|prickle homolog 3 (Drosophila)##NM_006150|PRICKLE3|4007|prickle homolog 3 (Drosophila)##AK300866|PRICKLE3|4007|prickle homolog 3 (Drosophila)##AK314788|PRICKLE3|4007|prickle homolog 3 (Drosophila)##BC002468|PRICKLE3|4007|prickle homolog 3 (Drosophila)##BC016856|PRICKLE3|4007|prickle homolog 3 (Drosophila)	0.907398	CTCF.p2:-10:0.907
chr15	65693227	65693339	reg1016599.p1	6.124	+	BC042054 TSC_hg19_v1_chr15_-_65670341 BC067107 NM_004884	-22932	-	BC006389 NM_017851 TSC_hg19_v1_chr15_-_65579223 AK000516	-114123	-	BC035776 AF035408 AY358904 AK225652 AK225926 AK313352 TSC_hg19_v1_chr15_-_65503811 NM_003613	-189471	-	TSC_hg19_v1_chr15_-_65715258 AB529157	21962	-	TSC_hg19_v1_chr15_-_65715412 AB052622 NM_020962	22118	-	AY354202 BC040203 NM_197960 AK302638	116324	-	BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC006389|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##NM_017851|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##AK000516|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##BC035776|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AF035408|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AY358904|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225652|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225926|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK313352|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##NM_003613|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AB052622|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##NM_020962|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##AY354202|DPP8|54878|dipeptidyl-peptidase 8##BC040203|DPP8|54878|dipeptidyl-peptidase 8##NM_197960|DPP8|54878|dipeptidyl-peptidase 8##AK302638|DPP8|54878|dipeptidyl-peptidase 8	0.999045	CTCF.p2:-16:0.999
chr16	67596650	67596756	reg1023635.p3	6.124	+	AK314804 NM_001191022 NM_006565 TSC_hg19_v1_chr16_+_67596455 U25435 AB209793 BC014267	-309	+	BC041086 AK023787 TSC_hg19_v1_chr16_+_67573861 BC098587	-22839	+	AK097087 TSC_hg19_v1_chr16_+_67572105	-24659	+	TSC_hg19_v1_chr16_+_67679038 AB113647 NM_001013838	82323	+	TSC_hg19_v1_chr16_+_67679059 FJ026014 AL832446	82414	+	TSC_hg19_v1_chr16_+_67686881 BC043154	90185	+	AK314804|CTCF|10664|CCCTC-binding factor (zinc finger protein)##NM_001191022|CTCF|10664|CCCTC-binding factor (zinc finger protein)##NM_006565|CTCF|10664|CCCTC-binding factor (zinc finger protein)##U25435|CTCF|10664|CCCTC-binding factor (zinc finger protein)##AB209793|CTCF|10664|CCCTC-binding factor (zinc finger protein)##BC014267|CTCF|10664|CCCTC-binding factor (zinc finger protein)##BC041086|FAM65A|79567|family with sequence similarity 65, member A##AK023787|FAM65A|79567|family with sequence similarity 65, member A##BC098587|FAM65A|79567|family with sequence similarity 65, member A##AK097087|FAM65A|79567|family with sequence similarity 65, member A##AB113647|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##NM_001013838|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##FJ026014|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##AL832446|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##BC043154|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing	0.533449	CTCF.p2:-32:0.486
chr2	163651955	163652058	reg1023926.p1	6.124	+	TSC_hg19_v1_chr2_+_163200633 AK312349 M81637 BC005214 AB209768 AB529141 CU675051 AK295413	-451245	+	NM_012198 TSC_hg19_v1_chr2_+_163200610	-451408	+	CU692330 BC111750 AY017378 AF095844 NM_022168 BC078180 TSC_hg19_v1_chr2_-_163175195 BC046208 AK292941 AK314611	-476923	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	43118	-	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	43241	-	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	940511	-	AK312349|GCA|25801|grancalcin, EF-hand calcium binding protein##M81637|GCA|25801|grancalcin, EF-hand calcium binding protein##BC005214|GCA|25801|grancalcin, EF-hand calcium binding protein##AB209768|GCA|25801|grancalcin, EF-hand calcium binding protein##AK295413|GCA|25801|grancalcin, EF-hand calcium binding protein##NM_012198|GCA|25801|grancalcin, EF-hand calcium binding protein##BC111750|IFIH1|64135|interferon induced with helicase C domain 1##AY017378|IFIH1|64135|interferon induced with helicase C domain 1##AF095844|IFIH1|64135|interferon induced with helicase C domain 1##NM_022168|IFIH1|64135|interferon induced with helicase C domain 1##BC078180|IFIH1|64135|interferon induced with helicase C domain 1##BC046208|IFIH1|64135|interferon induced with helicase C domain 1##AK292941|IFIH1|64135|interferon induced with helicase C domain 1##AK314611|IFIH1|64135|interferon induced with helicase C domain 1##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin	0.016471	
chr22	23045147	23045249	reg1022860.p1	6.124	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	-4680	+	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	-15995	+	TSC_hg19_v1_chr22_+_23010757 L29162	-34438	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	9684	+	TSC_hg19_v1_chr22_+_23063107 M18645 X53070 BC073786 X57805 X57813 AF026926 L35916 L35917 L35918 L35920 U43769 X64165 X64166 X54442	17933	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	89908	+	DQ896079|IGL@|3535|immunoglobulin lambda locus##BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3##L35918|IGLJ3|28831|immunoglobulin lambda joining 3	0.961017	CTCF.p2:4:0.961
chr14	82176734	82176845	reg1023623.p1	6.123	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-176562	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-176641	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-311963	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	3819684	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	3819752	+	TSC_hg19_v1_chr14_+_85999692 AK297248	3822796	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.954289	CTCF.p2:-7:0.954
chr17	72453692	72453802	reg1000636.p1	6.123	+	TSC_hg19_v1_chr17_+_72439191 AK126429	-14542	+	AJ276102 NM_018653	-23912	+	AK075397 AF207989 AK222909 TSC_hg19_v1_chr17_+_72428254 AK000249	-25492	+	NM_007261 AJ224864 BC032352	8791	+	AF020314 TSC_hg19_v1_chr17_+_72462772	9023	+	TSC_hg19_v1_chr17_+_72462821 AF161346 AJ010101 AJ010102 AJ010103 AJ238323 AK309636 BC020681 AB590938 CU689350	9063	+	AK126429|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AJ276102|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_018653|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_007261|CD300A|11314|CD300a molecule##AJ224864|CD300A|11314|CD300a molecule##BC032352|CD300A|11314|CD300a molecule##AF020314|CD300A|11314|CD300a molecule##AF161346|CD300A|11314|CD300a molecule##AJ010101|CD300A|11314|CD300a molecule##AJ010102|CD300A|11314|CD300a molecule##AJ010103|CD300A|11314|CD300a molecule##AJ238323|CD300A|11314|CD300a molecule##AK309636|CD300A|11314|CD300a molecule##BC020681|CD300A|11314|CD300a molecule	0.0	
chr19	16173682	16173803	reg1021955.p1	6.123	+	BC031284 TSC_hg19_v1_chr19_+_16145007	-28774	+	NM_001004465	-113925	+	TSC_hg19_v1_chr19_-_16045678 BC016853 NM_001128932 NM_021187	-128069	-	TSC_hg19_v1_chr19_+_16178347 NM_001145160 AK023385	4518	+	TSC_hg19_v1_chr19_+_16187132 NM_003290	13358	+	TSC_hg19_v1_chr19_+_16187304 BC037576 AK300136 AK307538 AK301285	13543	+	BC031284|FLJ25328|148231|uncharacterized LOC148231##NM_001004465|OR10H4|126541|olfactory receptor, family 10, subfamily H, member 4##BC016853|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_001128932|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_021187|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_001145160|TPM4|7171|tropomyosin 4##AK023385|TPM4|7171|tropomyosin 4##NM_003290|TPM4|7171|tropomyosin 4##BC037576|TPM4|7171|tropomyosin 4##AK300136|TPM4|7171|tropomyosin 4##AK307538|TPM4|7171|tropomyosin 4##AK301285|TPM4|7171|tropomyosin 4	0.0	
chr19	51945027	51945200	reg1021750.p2	6.123	+	TSC_hg19_v1_chr19_-_51920897 AK289900 AF310233 AY358337 AK290542 AK294185 AK303514 AK303717 BC101725 BC143497 BC143500 AF301007 AK292025 AK308982 AY032685 AF311905 NM_001171156 NM_001171157 NM_001171158 NM_001171159 NM_001171160 NM_001171161 NM_033130	-24165	-	TSC_hg19_v1_chr19_-_51893838 BC085012 BC143997 BC043532 NM_001193623	-51288	-	BC074916 BC074917 BC126139 AF340019 BC069430 AF340020 NM_001161748 NM_030657	-53916	-	AF310234 AK290412 AF195092 AF223403 BC053319 AK290149 AK295589 NM_014442	16564	-	NM_001080405	34724	+	NM_033329	58533	-	AK289900|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF310233|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY358337|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK290542|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK294185|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303514|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303717|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC101725|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143497|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143500|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF301007|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK292025|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK308982|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY032685|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF311905|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171156|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171157|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171158|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171159|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171160|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171161|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_033130|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC085012|LOC147646|147646|uncharacterized LOC147646##BC043532|LOC147646|147646|uncharacterized LOC147646##NM_001193623|LOC147646|147646|uncharacterized LOC147646##BC074916|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC074917|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC126139|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340019|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC069430|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340020|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_001161748|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_030657|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF310234|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290412|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF195092|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF223403|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##BC053319|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290149|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK295589|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_014442|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_001080405|CEACAM18|729767|carcinoembryonic antigen-related cell adhesion molecule 18##NM_033329|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)	0.0	
chr2	74148436	74148560	reg1024551.p2	6.123	+	AK311286 TSC_hg19_v1_chr2_+_74120134 AK124338 AK304523 AK310215 AK311011 AK312955 BC012617 X16940	-28361	+	NM_001199893 NM_001615 TSC_hg19_v1_chr2_+_74120106	-28397	+	BC007682 U73522 CU675757 CU688078 DQ892616 DQ895856 EU927390 TSC_hg19_v1_chr2_+_74058055	-90486	+	TSC_hg19_v1_chr2_+_74153968 NM_080916 NM_080918	5452	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	5502	+	TSC_hg19_v1_chr2_+_74154019 X97386	5548	+	AK124338|ACTG2|72|actin, gamma 2, smooth muscle, enteric##AK304523|ACTG2|72|actin, gamma 2, smooth muscle, enteric##AK310215|ACTG2|72|actin, gamma 2, smooth muscle, enteric##AK312955|ACTG2|72|actin, gamma 2, smooth muscle, enteric##BC012617|ACTG2|72|actin, gamma 2, smooth muscle, enteric##X16940|ACTG2|72|actin, gamma 2, smooth muscle, enteric##NM_001199893|ACTG2|72|actin, gamma 2, smooth muscle, enteric##NM_001615|ACTG2|72|actin, gamma 2, smooth muscle, enteric##BC007682|STAMBP|10617|STAM binding protein##U73522|STAMBP|10617|STAM binding protein##DQ892616|STAMBP|10617|STAM binding protein##DQ895856|STAMBP|10617|STAM binding protein##EU927390|STAMBP|10617|STAM binding protein##NM_080916|DGUOK|1716|deoxyguanosine kinase##NM_080918|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##X97386|DGUOK|1716|deoxyguanosine kinase	0.502286	CTCF.p2:2:0.502
chr6	51263757	51263867	reg1023114.p1	6.123	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-477277	+	AY028376 NM_172238	-582556	+	DQ012016 NM_001037498	-1247449	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	688583	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	787394	+	AF384857 JF305974 AB590713 BC070124 NM_052872	845449	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.086144	
chr7	64085582	64085738	reg1022597.p1	6.123	+	TSC_hg19_v1_chr7_-_64023456 AK122937 BC030700 NM_001130022 NM_178558	-62181	-	TSC_hg19_v1_chr7_-_64023450 AK094476	-62213	-	AB529206 EU832109 EU832203 TSC_hg19_v1_chr7_-_64023424 AK131240	-62282	-	TSC_hg19_v1_chr7_+_64126510 AK303931 BC017809 NM_001013746 NM_016220 BC047243	40867	+	TSC_hg19_v1_chr7_+_64254799 NM_001160183 NM_006524 AK294302 AK298230 AK055644 BC141847 BC037426	169155	+	AK090648 AX746558 TSC_hg19_v1_chr7_+_64342925	257242	+	AK122937|ZNF680|340252|zinc finger protein 680##BC030700|ZNF680|340252|zinc finger protein 680##NM_001130022|ZNF680|340252|zinc finger protein 680##NM_178558|ZNF680|340252|zinc finger protein 680##EU832109|ZNF680|340252|zinc finger protein 680##EU832203|ZNF680|340252|zinc finger protein 680##AK131240|ZNF680|340252|zinc finger protein 680##AK303931|ZNF107|51427|zinc finger protein 107##BC017809|ZNF107|51427|zinc finger protein 107##NM_001013746|ZNF107|51427|zinc finger protein 107##NM_016220|ZNF107|51427|zinc finger protein 107##BC047243|ZNF107|51427|zinc finger protein 107##NM_001160183|ZNF138|7697|zinc finger protein 138##NM_006524|ZNF138|7697|zinc finger protein 138##AK294302|ZNF138|7697|zinc finger protein 138##AK298230|ZNF138|7697|zinc finger protein 138##AK055644|ZNF138|7697|zinc finger protein 138##BC141847|ZNF138|7697|zinc finger protein 138##BC037426|ZNF138|7697|zinc finger protein 138##AK090648|ZNF273|10793|zinc finger protein 273	0.970103	CTCF.p2:11:0.970
chr1	156589259	156589366	reg1023453.p1	6.122	+	AB049054 NM_021817 AK294131 AK310758 AK308805 AK090712 AK308980 AK293797 BC029864	-126	+	AB528795 BC032436 TSC_hg19_v1_chr1_-_156571275 BC040147 AK125763 BC056904 AK000256 AK293026 AK301232 NM_015590 NM_182679	-18055	-	TSC_hg19_v1_chr1_+_156561594 AK316083	-27710	+	TSC_hg19_v1_chr1_+_156611723 AY358372 NM_021948 NM_198427	22417	+	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	22642	+	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	57833	-	AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC032436|GPATCH4|54865|G patch domain containing 4##BC040147|GPATCH4|54865|G patch domain containing 4##AK125763|GPATCH4|54865|G patch domain containing 4##BC056904|GPATCH4|54865|G patch domain containing 4##AK000256|GPATCH4|54865|G patch domain containing 4##AK293026|GPATCH4|54865|G patch domain containing 4##AK301232|GPATCH4|54865|G patch domain containing 4##NM_015590|GPATCH4|54865|G patch domain containing 4##NM_182679|GPATCH4|54865|G patch domain containing 4##AY358372|BCAN|63827|brevican##NM_021948|BCAN|63827|brevican##NM_198427|BCAN|63827|brevican##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin	0.796983	CTCF.p2:5:0.797
chr14	107130904	107131018	reg1023253.p2	6.122	+	AF103081 JN110643 JN110687 GQ504895 GQ504960 HM774028 HM774358 HM774582 HM774889 X98961 AF165107 AY423163 AF485471 AF485473 AJ306675 AY423172 FN563800 EF633801 HM994977 HM994995 HM995120 HM995247 HM995290 HM995392 HM995519 HM995754 HM995991 HM996039 HM996369 AY866776 DQ322973 DQ926438 AF471404 AJ245345 AJ401162 AM279604 AY866777 DQ100932 DQ100975 DQ926053 DQ926476 GU570357 L19914 Z96976 AB067024 AB067127 AB363182 AB373619 AF231404 AF471217 AF471316 AF471319 AF471331 AF471353 AJ519231 AJ556646 AJ556650 AY640562 AY866705 AY866733 AY971141 DQ065617 DQ065721 DQ100842 DQ535272 DQ535332 DQ926279 EF633803 EF633809 EF633824 EF633825 FJ385293 FJ492933 FN563769 FN563801 FN563814 FN563817 FN563830 FN563831 L38018 Y08405 Y08406 Z96975 Z98724 AJ519258 AJ519228 AJ519314 AJ519323 AJ519243 AJ519280 AJ519310 AJ519335 AJ519268 AJ519313 X62126 TSC_hg19_v1_chr14_-_107122620	-8472	-	DQ454926 GU552751 DQ523845 DQ454743 DQ454741 FJ873884 FJ873949 FJ874082 DQ454745 AY003790 EU350425 EU667608 EF407835 DQ454756 DQ454758 DQ322814 AF343367 AF343413 AF103266 AJ007443 AF103288 FJ385341 AF103034 AF103338 AF062236 JN110970 L03820 HM774324 HM774398 HM774726 HM774904 HM774928 L33041 HM775043 AF408742 AF485449 AF078936 AF485451 AF485453 AF485455 EF633815 DQ524036 DQ524153 DQ926062 HM995709 HM995710 HM995711 HM995712 HM995713 HM995863 HM995864 HM995866 DQ322813 HM996268 AJ245306 AY044149 DQ100802 DQ100910 DQ926129 AB063797 AB063898 AB063899 AF022008 AF099199 AF398961 AF471517 AF471518 AF471519 AF471520 AJ224899 AJ399811 AY554175 AY640527 DQ065678 DQ535356 DQ779565 DQ779566 FJ385288 FN563805 FN563806 FN563810 FN563812 FN563827 FN563828 HQ689733 JF806286 X77017 L48239 AY392926 AY393064 AY452138 X65898 X81752 X81753 BC073782 AF067420 TSC_hg19_v1_chr14_-_107114275 AK097071	-16852	-	S76904 AM279575 EU619960 JN110911 JN111008 HM774600 HM774602 AF103144 AF103285 AY866748 AY866803 DQ187673 DQ187733 DQ322974 DQ840851 DQ840858 DQ840864 AF006522 AF233250 AF471440 EF177980 EU835549 AB063812 AJ399808 AJ579268 DQ205169 DQ535364 DQ535448 DQ926460 Z98683 Z98702 AJ519260 AJ519262 AJ519304 AY392915 AF062171 TSC_hg19_v1_chr14_-_107099662 AK097355 AK097366 AK093636 AK097572 AX748235	-31438	-	GQ232991 EU814957 AY003867 GQ233006 AY003724 AY003757 FJ840009 GU552709 AY003791 FJ840366 JF810271 FJ840139 FJ874031 AF017464 HM774748 HM775002 HQ704029 DQ524134 DQ840815 DQ840856 AY530312 AY941926 AY986399 DQ100849 AB067106 AB363089 DQ535377 U00563 U64502 AY392909 AY393069 AY393070 AF062111 AF062168 X81739 X81750 Z14221 TSC_hg19_v1_chr14_-_107131555 AK097017 AK128476 AK130433	428	-	AY179836 AY179838 AY179841 AY179844 AY179846 AY179847 AY179848 AY179850 AY179854 AY179855 AY179856 AY179858 AY179860 AY003797 DQ454801 EF583677 EU099154 EU099192 AY003810 DQ454853 AY003779 DQ454620 DQ523910 GU552683 AY003802 AY003865 DQ454802 DQ454808 DQ454937 GU552691 GU552774 HM773974 FJ873961 EF441761 DQ454821 AY996332 FJ840044 FJ840053 FJ840143 FJ840193 FJ840194 FJ840196 FJ840204 FJ840239 FJ873866 FJ873869 FJ873895 FJ873936 FJ874043 GQ232929 HM116184 EF583683 EF175392 EU099153 GQ232967 GU358675 EF583681 EU099116 GU358674 JF810254 EF091907 EF175405 EU667599 EF091906 EF091908 EF091909 EF091910 EF175388 EF175390 EF175395 EF175406 EF175412 EF175417 EF175418 EF175420 EF175428 EF407848 EF441755 EU099106 EU350411 EU350412 EU433866 EU433872 EU433873 EU433879 EU667594 EU667595 EU667596 EU667597 EU667598 EU814958 EU814959 EU814960 EU814963 EU814966 FJ694873 FJ694874 GQ232838 GQ232965 GU358670 GU358676 GU358678 GU358682 JF810255 JF810274 AF103216 EF175425 EF583662 EF583663 EF583664 EF583665 EF583667 EF583673 EF583674 EF583675 EF583682 EU350410 M35478 EF407834 EF566907 EF407828 EF407830 EF583660 DQ100847 AY998726 AF209884 AJ007325 EF473862 EU099204 U86786 U86795 U86797 AF308545 AF308549 AF308553 AF308554 AF308559 AF308560 AF308561 EU090245 GQ903485 GQ903489 GQ903492 EU099120 GQ903503 AJ239384 EU099100 EU099208 Z80841 AF103052 AF103307 EU099086 EU099105 EU099142 EU099250 EU099176 EU099293 HM774304 AY515008 EU099141 EU099212 JN110763 JN110845 JN110914 JN111163 L04334 L04335 L04344 FJ385405 FJ385410 FJ385424 FJ385430 FJ385431 HM774065 HM774083 HM774091 HM774102 HM774365 HM774646 HM774653 HM774656 HM774681 HM774757 HM774769 HM774771 HM774786 HM774863 HM774965 HM775047 AF103339 AY515006 DQ523992 EU099090 EU099092 EU099115 EU099162 EU099179 EU099210 EU099218 EU099282 DQ097895 EF624069 EF624074 EF624075 EF624077 EF624128 EF624129 EF624130 EF624131 EF624138 EF624140 EF624141 EF624143 EF624174 EF624175 EF624176 EF624177 EF624179 EF624180 EF624182 EF624183 EF624184 EF624185 EF624186 EF624187 EF624188 EF624189 EF624190 EF624191 EF624192 EF624193 EU099060 EU099066 EU099128 EU099129 EU099145 EU099158 EU099160 EU099161 EU099165 EU099177 EU099178 EU099180 EU099247 EU146320 EU146330 EU146331 EU146336 EU146348 EU146349 EU146350 EU146351 EU146352 EU146353 EU146354 EU146355 EU146356 EU146357 EU146359 EU146383 EU146385 EU146386 M98324 AY393263 AY393515 DQ524120 EU090241 EU099081 EU099095 EU099099 EU099103 EU099111 EU099121 EU099135 EU099136 EU099164 EU099170 EU099174 EU099189 EU099205 EU099207 EU099209 EU099220 AF306353 AJ132852 AM259138 L12098 AF035025 AY392856 AY392858 AY393000 AY393010 AY393106 AY393123 AY393128 AY393133 AY393135 AY393137 AY393138 AY393233 AY393338 AY393342 AY393350 AY393373 AY393495 AY393496 AY393501 AY393503 AY393504 AY393508 AY393513 AY393514 AY393516 AY393517 AY393518 AY393519 AY393520 AY393522 AY393523 AY393525 AY393528 AY393532 AY393535 AY393538 AY393539 AY393540 AY393541 AY393542 AY393543 AY393544 AY393545 AY393546 AY393604 AY393611 AY393682 DQ100913 EU099069 EU099072 EU099083 EU099117 EU099138 EU099167 EU099168 EU099171 EU099175 EU099188 EU099198 EU099201 EU099202 EU099211 EU099219 EU099236 HM994945 AY574947 AY093586 AY093587 DQ100805 DQ100924 JN158773 AY093585 AF035785 AF098366 AY781822 DQ100688 DQ523989 HM995306 U00502 DQ100709 DQ100908 DQ523957 DQ524013 DQ524031 DQ524041 DQ524127 HM994992 HM994994 HM994997 HM994998 HM995013 HM995114 HM995174 HM995178 HM995180 HM995227 HM995241 HM995248 HM995283 HM995304 HM995307 HM995375 HM995447 HM995450 HM995512 HM995517 HM995520 HM995558 HM995678 HM995679 HM995680 HM995681 HM995682 HM995683 HM995684 HM995685 HM995744 HM996065 HM996269 HM996387 AF004321 AB063837 AB063906 AB063914 AB067012 AB067013 AB067018 AB067022 AB067235 AB363092 AF099200 AF174076 AY781868 AY866799 AY941859 DQ065663 DQ065677 DQ065701 DQ840709 DQ926327 EF178030 FJ195540 FJ385306 FJ385381 GQ856069 GQ903493 GQ903497 GQ903502 GQ903514 Z92894 AB027437 AB063666 AB063701 AB063715 AB063720 AB063763 AB063768 AB063778 AB063780 AB063785 AB063831 AB063902 AB063903 AB063921 AB066830 AB066835 AB066837 AB066840 AB066841 AB066842 AB066843 AB066928 AB066936 AB066939 AB066942 AB066944 AB066948 AB066949 AB066953 AB067158 AB067170 AB067305 AB067309 AB067333 AB067383 AB363078 AB363086 AB363094 AB363097 AB373608 AF021950 AF021951 AF021952 AF021970 AF021992 AF035784 AF062098 AF062127 AF062189 AF062216 AF062283 AF115114 AF115115 AF115116 AF115118 AF115119 AF174042 AF174065 AF174069 AF174073 AF174096 AF174109 AF174126 AF193848 AF217789 AF408721 AF460964 AF460965 AJ239346 AJ239357 AJ239365 AJ239372 AJ239376 AJ389170 AJ389172 AJ389179 AJ389181 AJ413995 AJ414000 AJ414001 AJ414002 AJ414004 AJ414008 AJ414009 AJ414010 AJ414015 AJ414017 AJ414020 AJ414021 AJ414023 AJ414027 AJ416562 AJ555258 AJ555262 AJ555275 AM040567 AY033246 AY055485 AY059634 AY281328 AY281329 AY466503 AY485361 AY553640 AY557623 AY557624 AY557625 AY557626 AY557627 AY561708 AY577304 AY781812 AY927666 AY941846 AY941940 D16837 DQ100681 DQ100723 DQ100733 DQ100777 DQ100808 DQ100811 DQ100820 DQ100839 DQ100902 DQ100906 DQ100912 DQ100952 DQ212523 DQ490739 DQ926531 EF555585 EF624068 EF624070 EF624071 EF624072 EF624073 EF624078 EF624079 EF624132 EF624136 EF624178 EF624181 EF624194 EF624195 EU202446 EU202448 EU835547 EU835554 FJ039781 FJ039784 FJ385379 GQ903484 GQ903486 GQ903487 GQ903490 GQ903491 GQ903495 GQ903496 GQ903498 GQ903500 GQ903501 GQ903504 GQ903507 GQ903509 GQ903511 GU570264 GU570271 GU570274 HM152493 HM152496 HM152502 HM152504 HM152527 HQ378401 HQ392874 HQ689778 HQ689781 JN158782 JN159449 JN159454 L14454 L23519 S73955 U00518 U00550 U00583 U71105 U85240 U89903 X64237 X67903 Z18841 Z34906 Z34908 Z34957 Z34959 Z34960 Z34961 Z34962 Z34963 AY927663 JN158517 DQ535261 DQ535284 DQ535416 DQ535445 DQ535451 DQ535460 EF177997 EF178006 EF178014 GU570268 Z35123 M18516 AF062105 AF062117 AF062156 AF062161 AF062175 AF062193 AF062198 AF062208 AF174026 AY172957 L06923 M62723 X65889 Z14214 Z47222 Z47224 Z47227 Z47233 Z47244 Z47245 Z47246 Z47247 Z47248 Z47249 Z47250 Z47251 Z47252 Z47253 Z47254 Z47255 Z47256 Z47257 Z47258 Z47259 Z47260 Z47261 Z47262 Z47263 Z47264 Z47265 Z47266 Z47267 Z47268 Z47269 Z47270 Z47271 Z47272 Z47273 Z80837 Z80853 CU688244 L23561 M24669 M24670 TSC_hg19_v1_chr14_-_107170387 BC062336	39274	-	M87789 L29121 BC069016 L08086 AK123800 BC025314 BC026038 AK131045 AK126133 AK130642 TSC_hg19_v1_chr14_-_107170426 AK097360 AK097364 AK128394 AK307688 BC016381 AK096985 AK097305 AK097356 AK123070 AK129512 AK129622 AK129777 AK130786 AK131065 BC070333 AK097361 AK097363 AK058027 AK129809	39454	-	BC073782|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF067420|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK097366|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK097017|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130433|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF035025|IGHV1-69|28461|immunoglobulin heavy variable 1-69##BC062336|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##M87789|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC069016|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123800|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC025314|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC026038|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126133|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK130642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097360|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097364|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128394|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016381|IGHM|3507|immunoglobulin heavy constant mu##AK096985|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097305|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097356|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123070|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129512|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129622|IGHM|3507|immunoglobulin heavy constant mu##AK129777|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK131065|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC070333|IGHV1-69|28461|immunoglobulin heavy variable 1-69##AK097361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097363|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058027|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129809|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.348126	CTCF.p2:-1:0.348
chr18	71749818	71749972	reg1021060.p1	6.122	+	AF448838 BC050329 NM_001201465 NM_138966	-1215086	-	AF448839 NM_138999	-1216962	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	-1538165	-	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	65132	-	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	65899	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	209284	-	AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_182511|CBLN2|147381|cerebellin 2 precursor##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15##NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)	0.075111	
chr18	9673588	9673733	reg1021228.p2	6.122	+	AK027064 TSC_hg19_v1_chr18_-_9614566 BC060829 AK315106 AF111106 NM_001042388 NM_005134	-59083	-	TSC_hg19_v1_chr18_-_9614547 AF200478 AK293869 AK292538	-59156	-	TSC_hg19_v1_chr18_+_9475545 NM_006788 BC013126	-198063	+	TSC_hg19_v1_chr18_+_9708217 AF234995 NM_006868	34549	+	AK314809 TSC_hg19_v1_chr18_+_9708269	34610	+	TSC_hg19_v1_chr18_+_9708299 BC001148	34642	+	AK027064|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##BC060829|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK315106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF111106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_001042388|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_005134|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF200478|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK293869|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK292538|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_006788|RALBP1|10928|ralA binding protein 1##BC013126|RALBP1|10928|ralA binding protein 1##AF234995|RAB31|11031|RAB31, member RAS oncogene family##NM_006868|RAB31|11031|RAB31, member RAS oncogene family##AK314809|RAB31|11031|RAB31, member RAS oncogene family##BC001148|RAB31|11031|RAB31, member RAS oncogene family	0.284957	CTCF.p2:27:0.285
chr2	89512777	89512883	reg1023348.p2	6.122	+	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-70241	-	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	-220417	-	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	-327740	+	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	403	-	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	107023	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	564924	+	BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC070334|IGKC|3514|immunoglobulin kappa constant	0.994293	CTCF.p2:-12:0.994
chr9	107922223	107922313	reg1005771.p2	6.121	+	NM_005502 TSC_hg19_v1_chr9_-_107690527	-231739	-	AK024328 TSC_hg19_v1_chr9_-_107690437 AF258627	-231788	-	BC146856 TSC_hg19_v1_chr9_-_107690419 AF285167 BC034824 BC141816 BC142693 AK022254	-231884	-	TSC_hg19_v1_chr9_+_108006931 NM_080546	84645	+	TSC_hg19_v1_chr9_+_108006937 AJ272365	84683	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	84799	+	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##NM_080546|SLC44A1|23446|solute carrier family 44, member 1##AJ272365|SLC44A1|23446|solute carrier family 44, member 1##AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1	0.0	
chr15	68230549	68230729	reg1020536.p1	6.120	+	NM_001031807	-112699	+	AK293459 NM_001206804	-389298	+	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	-395617	+	AF167160 NM_016166 BC118587 BC121797 TSC_hg19_v1_chr15_+_68346652 AK314515 BC104646	115973	+	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	116022	+	TSC_hg19_v1_chr15_-_68497633 BX640702 BC009516 AK092628 AK296804 AX747637	266998	-	NM_001031807|SKOR1|390598|SKI family transcriptional corepressor 1##AK293459|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_001206804|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5##AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1##NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1##BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1##BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1##AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1##BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1##BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1##BX640702|CALML4|91860|calmodulin-like 4##BC009516|CALML4|91860|calmodulin-like 4##AK092628|CALML4|91860|calmodulin-like 4##AK296804|CALML4|91860|calmodulin-like 4	0.0	
chr17	78873253	78873367	reg1024585.p1	6.120	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-354492	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-354661	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-422983	-	TSC_hg19_v1_chr17_+_78935064 BC073898	61822	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	92331	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	92384	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.054753	
chr4	15807919	15808053	reg1012209.p3	6.120	+	TSC_hg19_v1_chr4_+_15779950 AK303169 NM_001775 D84276 AK313268 M34461 BC007964 D84277 DQ893184 EU176777 AK297592	-28015	+	TSC_hg19_v1_chr4_+_15704753 AB175627 AB590680 BT019502	-103227	+	TSC_hg19_v1_chr4_+_15704695 AK312497 BC012095	-103291	+	BC003628 M60047 BC008910 BC018852 AK291307 TSC_hg19_v1_chr4_-_15939972	131974	-	NM_005130	132376	-	AF361936 CU693032 DQ892062 DQ895256 AB529223 BC025720 AB021123 AY358978 NM_031950	156818	-	AK303169|CD38|952|CD38 molecule##NM_001775|CD38|952|CD38 molecule##D84276|CD38|952|CD38 molecule##AK313268|CD38|952|CD38 molecule##M34461|CD38|952|CD38 molecule##BC007964|CD38|952|CD38 molecule##D84277|CD38|952|CD38 molecule##DQ893184|CD38|952|CD38 molecule##EU176777|CD38|952|CD38 molecule##AK297592|CD38|952|CD38 molecule##AB175627|BST1|683|bone marrow stromal cell antigen 1##BT019502|BST1|683|bone marrow stromal cell antigen 1##AK312497|BST1|683|bone marrow stromal cell antigen 1##BC012095|BST1|683|bone marrow stromal cell antigen 1##BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1##M60047|FGFBP1|9982|fibroblast growth factor binding protein 1##BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1##BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1##AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1##NM_005130|FGFBP1|9982|fibroblast growth factor binding protein 1##AF361936|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ892062|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ895256|FGFBP2|83888|fibroblast growth factor binding protein 2##BC025720|FGFBP2|83888|fibroblast growth factor binding protein 2##AB021123|FGFBP2|83888|fibroblast growth factor binding protein 2##AY358978|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_031950|FGFBP2|83888|fibroblast growth factor binding protein 2	0.038532	
chrX	40028872	40028980	reg1020848.p2	6.120	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	-72234	-	TSC_hg19_v1_chrX_+_38663536 AK001248	-1365386	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-1365466	+	BC114220 NM_001123383 NM_001123384	7655	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	411260	+	AF291814 TSC_hg19_v1_chrX_+_40440231 AK293510 BC084541 AK297007 AF109363	411316	+	AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF291814|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK293510|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##BC084541|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK297007|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF109363|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.153116	
chr1	172368488	172368668	reg1007110.p1	6.119	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-557875	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-617740	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-617764	+	AL035295 NM_139240 BC038410	21250	+	TSC_hg19_v1_chr1_-_172413202 BC006539	44610	-	TSC_hg19_v1_chr1_-_172413207 AK308201	44629	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.0	
chr17	64896336	64896455	reg1023680.p1	6.119	+	BC101633 NM_145811 BC101607 AF361351 AF458898	-22975	+	AK290171 TSC_hg19_v1_chr17_+_64831234	-65160	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	-597468	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	64494	+	NM_000727 L07738 AK313852 BC113486 BC113492 BC069493 HQ258641	144316	+	D29677 AK310217 TSC_hg19_v1_chr17_-_65241302 BC130582 BC144083	344894	-	BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##NM_000727|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##L07738|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##AK313852|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113486|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113492|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC069493|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##HQ258641|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##D29677|HELZ|9931|helicase with zinc finger##AK310217|HELZ|9931|helicase with zinc finger##BC130582|HELZ|9931|helicase with zinc finger##BC144083|HELZ|9931|helicase with zinc finger	0.901361	CTCF.p2:21:0.901
chr4	164029036	164029137	reg1020882.p1	6.119	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	-943935	-	AK294459 NM_014247	-3840089	+	AK058100 NM_152543	-4072754	-	TSC_hg19_v1_chr4_-_164088002 AK097352	58906	-	TSC_hg19_v1_chr4_-_164088043 AK308601	58951	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	58992	-	AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.015989	
chr1	190405849	190405987	reg1027042.p1	6.118	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-3607830	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-3756428	-	M33478 NM_002597	-3975691	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	40817	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	1721685	+	AY643711 NM_001039152	1880203	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.999178	CTCF.p2:23:0.999
chr16	79295523	79295656	reg1025423.p1	6.117	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-1162134	+	NM_001244755	-1232604	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	-1239139	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	339026	-	AF125108 NM_130897 BC054892 BC035232	1279299	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	1542458	-	NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2	0.981331	CTCF.p2:-2:0.981
chr8	102658768	102658949	reg1003327.p2	6.117	+	TSC_hg19_v1_chr8_+_102504840 AK023844 AK292853 BC069618 BC069633 BC069638 BC129822 BC129823	-153948	+	TSC_hg19_v1_chr8_+_102504667 NM_024915 AK296817 AK310221	-154193	+	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	-440904	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	144325	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	144342	-	NM_032041	144580	-	AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##NM_032041|NCALD|83988|neurocalcin delta	0.0	
chr1	156435685	156435770	reg1035261.p1	6.116	+	NM_006365 U49857 BC059943 BC107686 BC050448 TSC_hg19_v1_chr1_-_156399219 AK095626 BC054045	-36451	-	AF193807 AK290840 AK294641 AK303799 AK303814 AY139092 AY139093 NM_020407 AK308556 TSC_hg19_v1_chr1_+_156339022 AK054780 BC065218	-96706	+	TSC_hg19_v1_chr1_-_156308103 NM_001008800 NM_005998	-127575	-	BC040949 TSC_hg19_v1_chr1_-_156460409	24676	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	34791	-	TSC_hg19_v1_chr1_-_156470563 BC018985 BC032479 AB210005 BC064988	34823	-	NM_006365|C1orf61|10485|chromosome 1 open reading frame 61##U49857|C1orf61|10485|chromosome 1 open reading frame 61##BC059943|C1orf61|10485|chromosome 1 open reading frame 61##BC107686|C1orf61|10485|chromosome 1 open reading frame 61##BC050448|C1orf61|10485|chromosome 1 open reading frame 61##AK095626|C1orf61|10485|chromosome 1 open reading frame 61##BC054045|C1orf61|10485|chromosome 1 open reading frame 61##AF193807|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK290840|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK294641|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303799|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303814|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139092|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139093|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_020407|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK308556|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK054780|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##BC065218|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_001008800|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_005998|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##BC040949|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D##BC018985|MEF2D|4209|myocyte enhancer factor 2D##BC032479|MEF2D|4209|myocyte enhancer factor 2D##AB210005|MEF2D|4209|myocyte enhancer factor 2D	0.282594	CTCF.p2:-12:0.283
chr2	160414113	160414233	reg1023062.p2	6.116	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	-271025	-	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	-589026	+	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	-762338	+	AK127551 BC107570 TSC_hg19_v1_chr2_-_160472070	57841	-	BX647250 AL834381 TSC_hg19_v1_chr2_-_160473021 NM_013450 AB040909	58846	-	TSC_hg19_v1_chr2_-_160568946 BX641037 BX537650	154733	-	AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BX641037|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	0.692545	CTCF.p2:-12:0.693
chr5	11720115	11720247	reg1027385.p1	6.116	+	TSC_hg19_v1_chr5_-_10761361 NM_004394	-958782	-	TSC_hg19_v1_chr5_-_10761341 BC002726	-958839	-	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	-958922	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	183855	-	TSC_hg19_v1_chr5_-_11904184 AK296232	184003	-	AX800026 AY045575 NM_001369	2224407	-	NM_004394|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5	0.989545	CTCF.p2:12:0.990
chr5	172337979	172338115	reg1023188.p1	6.116	+	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	-76729	+	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	-139836	-	AF275799 TSC_hg19_v1_chr5_-_172083715	-254404	-	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	48401	+	NM_003945 TSC_hg19_v1_chr5_+_172410801 BC119715 BC119714 AK312068 Y15286	72735	+	TSC_hg19_v1_chr5_+_172410833 CR456856 CR542131	72797	+	NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1##NM_003945|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119715|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119714|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##AK312068|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##Y15286|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR456856|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR542131|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1	0.919903	CTCF.p2:4:0.920
chr8	135918467	135918597	reg1012546.p3	6.116	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-193258	-	TSC_hg19_v1_chr8_-_135725053 AB463359	-193453	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	-209738	-	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	551126	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	551669	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	3590574	-	BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B	0.042583	
chr8	79144691	79144793	reg1024389.p2	6.116	+	NM_001172086 NM_001172087	-1231463	-	BC000661 BC093043 TSC_hg19_v1_chr8_-_77912318 BC005375 M85038 AK312997 M86852 NM_000318 NM_001079867	-1232333	-	AK131399 TSC_hg19_v1_chr8_+_77765961	-1378853	+	NM_006823 NM_181839 S76965	283593	+	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	433578	+	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	572906	-	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2##NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2##BC000661|PEX2|5828|peroxisomal biogenesis factor 2##BC093043|PEX2|5828|peroxisomal biogenesis factor 2##BC005375|PEX2|5828|peroxisomal biogenesis factor 2##M85038|PEX2|5828|peroxisomal biogenesis factor 2##AK312997|PEX2|5828|peroxisomal biogenesis factor 2##M86852|PEX2|5828|peroxisomal biogenesis factor 2##NM_000318|PEX2|5828|peroxisomal biogenesis factor 2##NM_001079867|PEX2|5828|peroxisomal biogenesis factor 2##AK131399|ZFHX4|79776|zinc finger homeobox 4##NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7	0.944906	CTCF.p2:3:0.945
chr19	19226931	19227064	reg1023001.p2	6.115	+	TSC_hg19_v1_chr19_+_19174802 NM_178526 BC045598 FN356975	-52188	+	BC067125 TSC_hg19_v1_chr19_+_19144690	-82337	+	TSC_hg19_v1_chr19_+_19144524 BC056161	-82450	+	TSC_hg19_v1_chr19_-_19249264 AK225424 AK000429 NM_017814	22257	-	TSC_hg19_v1_chr19_-_19249268 BC005210 AK096964	22278	-	TSC_hg19_v1_chr19_-_19281067 AK057210	54070	-	NM_178526|SLC25A42|284439|solute carrier family 25, member 42##BC045598|SLC25A42|284439|solute carrier family 25, member 42##FN356975|SLC25A42|284439|solute carrier family 25, member 42##BC067125|ARMC6|93436|armadillo repeat containing 6##BC056161|ARMC6|93436|armadillo repeat containing 6##AK225424|TMEM161A|54929|transmembrane protein 161A##AK000429|TMEM161A|54929|transmembrane protein 161A##NM_017814|TMEM161A|54929|transmembrane protein 161A##BC005210|TMEM161A|54929|transmembrane protein 161A##AK096964|TMEM161A|54929|transmembrane protein 161A##AK057210|MEF2B|100271849|myocyte enhancer factor 2B	0.997053	CTCF.p2:-2:0.997
chr6	157983051	157983229	reg1022993.p2	6.115	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-180601	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-237923	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-238556	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	261149	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	261234	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	419747	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.0	
chr1	180447437	180447527	reg1019627.p1	6.114	+	NM_033343 AF179849	-248046	+	TSC_hg19_v1_chr1_+_180124047 AB384905	-323426	+	AF361868 TSC_hg19_v1_chr1_+_180124032 L42379	-323450	+	TSC_hg19_v1_chr1_-_180471976 AK314112 NM_032360	24482	-	TSC_hg19_v1_chr1_+_180601151 BC028576 NM_001135669 NM_004736	153655	+	AK309750 TSC_hg19_v1_chr1_+_180601157	153677	+	NM_033343|LHX4|89884|LIM homeobox 4##AF179849|LHX4|89884|LIM homeobox 4##AF361868|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##L42379|QSOX1|5768|quiescin Q6 sulfhydryl oxidase 1##AK314112|ACBD6|84320|acyl-CoA binding domain containing 6##NM_032360|ACBD6|84320|acyl-CoA binding domain containing 6##BC028576|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_001135669|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_004736|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AK309750|XPR1|9213|xenotropic and polytropic retrovirus receptor 1	0.34372	CTCF.p2:22:0.344
chr1	32421738	32421918	reg1024204.p1	6.114	+	TSC_hg19_v1_chr1_-_32403992 NM_080391	-17831	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	-17897	-	NM_001195100 NM_001195101	-36570	-	TSC_hg19_v1_chr1_+_32479463 AK293369 AK091346 AX746925 AK312916 AK303218 BC000717 BC019109 M88108 NM_006559 BC010132 AB590354 DQ895323 U78971	57670	+	TSC_hg19_v1_chr1_+_32538502 AK023331 NM_018056	116676	+	AL136695 TSC_hg19_v1_chr1_+_32538539 AK001177 BC004364 AK296653 AK298766 AK300293	116746	+	NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK023331|TMEM39B|55116|transmembrane protein 39B##NM_018056|TMEM39B|55116|transmembrane protein 39B##AL136695|TMEM39B|55116|transmembrane protein 39B##AK001177|TMEM39B|55116|transmembrane protein 39B##BC004364|TMEM39B|55116|transmembrane protein 39B##AK296653|TMEM39B|55116|transmembrane protein 39B##AK298766|TMEM39B|55116|transmembrane protein 39B##AK300293|TMEM39B|55116|transmembrane protein 39B	0.993784	CTCF.p2:14:0.994
chr20	35346212	35346335	reg1024088.p1	6.114	+	BC042041 AK291513 NM_032214 NM_175077	-71686	-	TSC_hg19_v1_chr20_+_35234211 BC004446 BC001871 AF274936 S83364	-111969	+	TSC_hg19_v1_chr20_+_35234167 AF112213	-112110	+	TSC_hg19_v1_chr20_-_35374488 AK027665 AK295466 AB044943 AF251054 AK023618 AK295420	28206	-	TSC_hg19_v1_chr20_-_35374542 NM_022477 NM_032013	28279	-	TSC_hg19_v1_chr20_-_35402167 BC035821 AK093031 AX747868 AK290738 NM_001145316 NM_024918 AK301671 AK301840 BC058899 AK023408 BC026011 NM_001145315 NM_001145317 NM_001145318	55912	-	BC042041|SLA2|84174|Src-like-adaptor 2##AK291513|SLA2|84174|Src-like-adaptor 2##NM_032214|SLA2|84174|Src-like-adaptor 2##NM_175077|SLA2|84174|Src-like-adaptor 2##BC004446|C20orf24|55969|chromosome 20 open reading frame 24##BC001871|C20orf24|55969|chromosome 20 open reading frame 24##AF274936|C20orf24|55969|chromosome 20 open reading frame 24##S83364|C20orf24|55969|chromosome 20 open reading frame 24##AF112213|C20orf24|55969|chromosome 20 open reading frame 24##AK027665|NDRG3|57446|NDRG family member 3##AK295466|NDRG3|57446|NDRG family member 3##AB044943|NDRG3|57446|NDRG family member 3##AK023618|NDRG3|57446|NDRG family member 3##AK295420|NDRG3|57446|NDRG family member 3##NM_022477|NDRG3|57446|NDRG family member 3##NM_032013|NDRG3|57446|NDRG family member 3##BC035821|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK093031|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK290738|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145316|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_024918|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301671|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301840|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC058899|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK023408|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC026011|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145315|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145317|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145318|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	0.032464	
chr11	133915775	133915865	reg1023783.p1	6.113	+	NM_014987 TSC_hg19_v1_chr11_-_133826886	-88938	-	AF521713 AK098717 NM_174927 BC058039	-200439	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	-513506	-	AJ416101 NM_001205329 NM_032801 AY358335 TSC_hg19_v1_chr11_+_133938938 AK074769 AF448478	23061	+	AK075309 AK125071 AK225666 TSC_hg19_v1_chr11_+_133938965 BC057284 AJ344431 AF356518 BC012147 BC010690	23152	+	TSC_hg19_v1_chr11_-_134093862 D29954	178026	-	NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AJ416101|JAM3|83700|junctional adhesion molecule 3##NM_001205329|JAM3|83700|junctional adhesion molecule 3##NM_032801|JAM3|83700|junctional adhesion molecule 3##AY358335|JAM3|83700|junctional adhesion molecule 3##AK074769|JAM3|83700|junctional adhesion molecule 3##AF448478|JAM3|83700|junctional adhesion molecule 3##AK075309|JAM3|83700|junctional adhesion molecule 3##AK125071|JAM3|83700|junctional adhesion molecule 3##AK225666|JAM3|83700|junctional adhesion molecule 3##BC057284|JAM3|83700|junctional adhesion molecule 3##AJ344431|JAM3|83700|junctional adhesion molecule 3##AF356518|JAM3|83700|junctional adhesion molecule 3##BC012147|JAM3|83700|junctional adhesion molecule 3##BC010690|JAM3|83700|junctional adhesion molecule 3##D29954|NCAPD3|23310|non-SMC condensin II complex, subunit D3	0.277033	CTCF.p2:4:0.277
chr6	80280608	80280729	reg1023259.p2	6.113	+	TSC_hg19_v1_chr6_-_80247114 AK299314 BX648161 BC050327 NM_001122769 NM_181714	-33539	-	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	-336243	-	L40357 TSC_hg19_v1_chr6_-_79944391 AF401520 AF274949 BC009529	-336310	-	TSC_hg19_v1_chr6_+_80341019 AF340151 NM_031469 BC109043 BC109044 AK311757 BC040489 AK074506 BC052987 BC060799 BC070059 AJ297972	60406	+	NM_001243308	299468	-	TSC_hg19_v1_chr6_-_80656870 CU691582 DQ891229 AF277094 BC038506 AY037298 AK310625 AK312511 AK055277 DQ426871 NM_022726	376424	-	AK299314|LCA5|167691|Leber congenital amaurosis 5##BX648161|LCA5|167691|Leber congenital amaurosis 5##BC050327|LCA5|167691|Leber congenital amaurosis 5##NM_001122769|LCA5|167691|Leber congenital amaurosis 5##NM_181714|LCA5|167691|Leber congenital amaurosis 5##AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3##L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3##BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF340151|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_031469|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109043|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109044|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK311757|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC040489|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK074506|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC052987|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC060799|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC070059|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AJ297972|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7##DQ891229|ELOVL4|6785|ELOVL fatty acid elongase 4##AF277094|ELOVL4|6785|ELOVL fatty acid elongase 4##BC038506|ELOVL4|6785|ELOVL fatty acid elongase 4##AY037298|ELOVL4|6785|ELOVL fatty acid elongase 4##AK310625|ELOVL4|6785|ELOVL fatty acid elongase 4##AK312511|ELOVL4|6785|ELOVL fatty acid elongase 4##AK055277|ELOVL4|6785|ELOVL fatty acid elongase 4##DQ426871|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_022726|ELOVL4|6785|ELOVL fatty acid elongase 4	0.0	
chrX	146920096	146920235	reg1020907.p1	6.113	+	NM_001144064 NM_001244892	-1023917	-	NM_001144064 NM_001244892	-1028864	+	NM_004709 Y08902 BC113600 BC113604 HQ258719	-2011104	+	TSC_hg19_v1_chrX_+_146993468 BC086957 NM_001185075 NM_001185076 NM_001185081 NM_001185082 NM_002024 S65791 X69962 M67468	73328	+	BC038998 TSC_hg19_v1_chrX_+_146993559	73386	+	TSC_hg19_v1_chrX_+_146993685 CU691632	73528	+	NM_001144064|CXorf51A|100129239|chromosome X open reading frame 51A##NM_001244892|CXorf51B|100133053|chromosome X open reading frame 51B##NM_001144064|CXorf51A|100129239|chromosome X open reading frame 51A##NM_001244892|CXorf51B|100133053|chromosome X open reading frame 51B##NM_004709|CXorf1|9142|chromosome X open reading frame 1##Y08902|CXorf1|9142|chromosome X open reading frame 1##BC113600|CXorf1|9142|chromosome X open reading frame 1##BC113604|CXorf1|9142|chromosome X open reading frame 1##HQ258719|CXorf1|9142|chromosome X open reading frame 1##BC086957|FMR1|2332|fragile X mental retardation 1##NM_001185075|FMR1|2332|fragile X mental retardation 1##NM_001185076|FMR1|2332|fragile X mental retardation 1##NM_001185081|FMR1|2332|fragile X mental retardation 1##NM_001185082|FMR1|2332|fragile X mental retardation 1##NM_002024|FMR1|2332|fragile X mental retardation 1##S65791|FMR1|2332|fragile X mental retardation 1##X69962|FMR1|2332|fragile X mental retardation 1##M67468|FMR1|2332|fragile X mental retardation 1##BC038998|FMR1|2332|fragile X mental retardation 1	0.0	
chr17	7801216	7801323	reg1021393.p1	6.112	+	TSC_hg19_v1_chr17_+_7792039 AF006515 NM_001005273 NM_005852 U91543	-9168	+	TSC_hg19_v1_chr17_+_7788113 NM_001005271	-13158	+	TSC_hg19_v1_chr17_+_7761320 BC060779 AK289520	-39924	+	TSC_hg19_v1_chr17_+_7812703 AK096555	11491	+	AF016411 BC096232 BC096233 BC096234 BC099634 NM_004732	31483	-	AB528455 DQ890860 DQ894015 BC025413 TSC_hg19_v1_chr17_-_7835265 BC032717 AK314038 NM_021210 NM_001166621	33991	-	NM_001005273|CHD3|1107|chromodomain helicase DNA binding protein 3##NM_005852|CHD3|1107|chromodomain helicase DNA binding protein 3##U91543|CHD3|1107|chromodomain helicase DNA binding protein 3##NM_001005271|CHD3|1107|chromodomain helicase DNA binding protein 3##BC060779|CYB5D1|124637|cytochrome b5 domain containing 1##AK289520|CYB5D1|124637|cytochrome b5 domain containing 1##AK096555|CHD3|1107|chromodomain helicase DNA binding protein 3##AF016411|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096232|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096233|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096234|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC099634|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_004732|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##DQ890860|TRAPPC1|58485|trafficking protein particle complex 1##DQ894015|TRAPPC1|58485|trafficking protein particle complex 1##BC025413|TRAPPC1|58485|trafficking protein particle complex 1##BC032717|TRAPPC1|58485|trafficking protein particle complex 1##AK314038|TRAPPC1|58485|trafficking protein particle complex 1##NM_021210|TRAPPC1|58485|trafficking protein particle complex 1##NM_001166621|TRAPPC1|58485|trafficking protein particle complex 1	0.0	
chr1	94511218	94511344	reg1018108.p1	6.112	+	TSC_hg19_v1_chr1_-_94375075 AK290449	-136191	-	TSC_hg19_v1_chr1_-_94374987 NM_002061	-136277	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	-136319	-	AF001945 U88667 AK295818 AF000148 AB210040 DQ426859 NM_000350	75410	-	TSC_hg19_v1_chr1_-_94703141 BC093767 U90920 AK307733 BC022483	191783	-	TSC_hg19_v1_chr1_-_94703252 BC067839 NM_004815	191998	-	AK290449|GCLM|2730|glutamate-cysteine ligase, modifier subunit##NM_002061|GCLM|2730|glutamate-cysteine ligase, modifier subunit##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit##AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##BC093767|ARHGAP29|9411|Rho GTPase activating protein 29##U90920|ARHGAP29|9411|Rho GTPase activating protein 29##AK307733|ARHGAP29|9411|Rho GTPase activating protein 29##BC022483|ARHGAP29|9411|Rho GTPase activating protein 29##BC067839|ARHGAP29|9411|Rho GTPase activating protein 29##NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29	0.946126	CTCF.p2:-20:0.946
chr3	149376265	149376397	reg1023948.p2	6.112	+	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	-596	-	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-183842	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-183929	+	AK022036 NM_001168278	44728	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	93908	-	TSC_hg19_v1_chr3_-_149470277 AF059618 BC001228 BC022206 AF125096 BC093077 NM_016094	93939	-	AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2##AF059618|COMMD2|51122|COMM domain containing 2##BC001228|COMMD2|51122|COMM domain containing 2##BC022206|COMMD2|51122|COMM domain containing 2##AF125096|COMMD2|51122|COMM domain containing 2##BC093077|COMMD2|51122|COMM domain containing 2##NM_016094|COMMD2|51122|COMM domain containing 2	0.0	
chr8	61841813	61841993	reg1021254.p1	6.112	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-250501	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-250615	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-412153	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	358647	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	760443	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	785115	-	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase	0.0	
chr9	132552717	132552837	reg1022986.p1	6.112	+	AB590756 AF027740 AF217965 AF010316 TSC_hg19_v1_chr9_-_132515313 AK311947 BC008280 NM_004878	-37461	-	TSC_hg19_v1_chr9_+_132428029 AF061970	-124711	+	BC014645 NM_016307 TSC_hg19_v1_chr9_+_132427927	-124854	+	TSC_hg19_v1_chr9_+_132565426 AF317129 NM_014506	12643	+	TSC_hg19_v1_chr9_+_132565465 BC015578 DQ893204 DQ893205 DQ893696 DQ896532 DQ896533 DQ896867	12696	+	BT006931 AB590352 DQ892657 DQ895897 TSC_hg19_v1_chr9_-_132586385 BC014484 AK314505 AK075343	33603	-	AF027740|PTGES|9536|prostaglandin E synthase##AF217965|PTGES|9536|prostaglandin E synthase##AF010316|PTGES|9536|prostaglandin E synthase##AK311947|PTGES|9536|prostaglandin E synthase##BC008280|PTGES|9536|prostaglandin E synthase##NM_004878|PTGES|9536|prostaglandin E synthase##AF061970|PRRX2|51450|paired related homeobox 2##BC014645|PRRX2|51450|paired related homeobox 2##NM_016307|PRRX2|51450|paired related homeobox 2##AF317129|TOR1B|27348|torsin family 1, member B (torsin B)##NM_014506|TOR1B|27348|torsin family 1, member B (torsin B)##BC015578|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893204|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893205|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893696|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896532|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896533|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896867|TOR1B|27348|torsin family 1, member B (torsin B)##BT006931|TOR1A|1861|torsin family 1, member A (torsin A)##DQ892657|TOR1A|1861|torsin family 1, member A (torsin A)##DQ895897|TOR1A|1861|torsin family 1, member A (torsin A)##BC014484|TOR1A|1861|torsin family 1, member A (torsin A)##AK314505|TOR1A|1861|torsin family 1, member A (torsin A)##AK075343|TOR1A|1861|torsin family 1, member A (torsin A)	0.113534	
chr1	154317841	154317977	reg1027411.p1	6.111	+	TSC_hg19_v1_chr1_+_154301249 AK054886	-16653	+	AY302537 NM_020452	-17634	+	TSC_hg19_v1_chr1_+_154298034 NM_001005855 X58235	-19846	+	NM_000565 NM_001206866 NM_181359 X12830 BC089410 TSC_hg19_v1_chr1_+_154377822	59841	+	AK223582 BC132684 BC132686 TSC_hg19_v1_chr1_+_154377856	59943	+	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	60165	+	AK054886|ATP8B2|57198|ATPase, class I, type 8B, member 2##AY302537|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_020452|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_001005855|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_000565|IL6R|3570|interleukin 6 receptor##NM_001206866|IL6R|3570|interleukin 6 receptor##NM_181359|IL6R|3570|interleukin 6 receptor##X12830|IL6R|3570|interleukin 6 receptor##BC089410|IL6R|3570|interleukin 6 receptor##AK223582|IL6R|3570|interleukin 6 receptor##BC132684|IL6R|3570|interleukin 6 receptor##BC132686|IL6R|3570|interleukin 6 receptor##AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor	0.860618	CTCF.p2:-12:0.861
chr12	131355506	131355656	reg1020378.p2	6.111	+	TSC_hg19_v1_chr12_-_131323796 D14582 BC047496 NM_001980 NM_194356	-31828	-	TSC_hg19_v1_chr12_-_131200818 BC007632	-154756	-	AB002316 NM_015347	-353172	-	TSC_hg19_v1_chr12_+_131356615 AF054183 AK311223 AK316193 AK312466 BC000852 NM_006325	1005	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	1044	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	1130	+	D14582|STX2|2054|syntaxin 2##BC047496|STX2|2054|syntaxin 2##NM_001980|STX2|2054|syntaxin 2##NM_194356|STX2|2054|syntaxin 2##BC007632|RIMBP2|23504|RIMS binding protein 2##AB002316|RIMBP2|23504|RIMS binding protein 2##NM_015347|RIMBP2|23504|RIMS binding protein 2##AF054183|RAN|5901|RAN, member RAS oncogene family##AK316193|RAN|5901|RAN, member RAS oncogene family##AK312466|RAN|5901|RAN, member RAS oncogene family##BC000852|RAN|5901|RAN, member RAS oncogene family##NM_006325|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family	0.07304	
chr16	56366714	56366811	reg1023866.p1	6.111	+	AK056008 TSC_hg19_v1_chr16_+_56225314	-141452	+	NM_020988 NM_138736 TSC_hg19_v1_chr16_+_56225253	-141511	+	AK294334 NM_001190158	-376820	-	AF124145 TSC_hg19_v1_chr16_-_56459357	92567	-	TSC_hg19_v1_chr16_-_56459390 NM_001144 BC069197	92661	-	AJ001810 CR456919 AB590091 AM392991 AM393219 DQ892142 DQ895336 TSC_hg19_v1_chr16_-_56485242 BC001403 BX647665 NM_007006 AK312721 BX537360	118448	-	AK056008|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_020988|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_138736|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##AK294334|CES5A|221223|carboxylesterase 5A##NM_001190158|CES5A|221223|carboxylesterase 5A##AF124145|AMFR|267|autocrine motility factor receptor##NM_001144|AMFR|267|autocrine motility factor receptor##BC069197|AMFR|267|autocrine motility factor receptor##AJ001810|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##CR456919|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AM392991|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AM393219|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ892142|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ895336|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BC001403|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BX647665|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##NM_007006|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AK312721|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BX537360|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	0.646773	CTCF.p2:1:0.647
chr7	11381061	11381204	reg1024862.p1	6.111	+	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	-367622	+	AK130950 TSC_hg19_v1_chr7_-_10979760 AK024837 U94586 BC105295 NM_002489	-401348	-	CR407618 CR541716 TSC_hg19_v1_chr7_-_10979730 AF201077 BC101794 BC101796	-401423	-	TSC_hg19_v1_chr7_-_11871825 AK092252 AX747433 NM_015204	490657	-	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	869793	+	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	1062400	-	AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14##AK130950|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK024837|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##U94586|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC105295|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_002489|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR407618|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR541716|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AF201077|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101794|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101796|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains	0.632004	CTCF.p2:12:0.632
chr17	20704989	20705138	reg1024812.p1	6.110	+	NM_001190790	-222027	+	BC105943 AK290263 NM_001042685 AK296659	-334228	-	TSC_hg19_v1_chr17_+_20224469 BC036241	-480597	+	AK057473 TSC_hg19_v1_chr17_+_20771859 BC041488 EF565107	66742	+	CU686685 BC068597 NM_001004306	94329	-	TSC_hg19_v1_chr17_-_20946322 AB590105 AB028986 NM_015276	241209	-	NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK290263|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001042685|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##BC036241|CCDC144C|348254|coiled-coil domain containing 144C##BC068597|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001004306|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##AB028986|USP22|23326|ubiquitin specific peptidase 22##NM_015276|USP22|23326|ubiquitin specific peptidase 22	0.25584	CTCF.p2:-7:0.256
chr5	1495001	1495125	reg1024375.p2	6.110	+	CU676500 BC020166 AK090444 TSC_hg19_v1_chr5_-_1494996	-129	-	S46955 EF174603 M95167 NM_001044	-49537	-	AB045223 DQ892147 DQ895343 AK027306 BC025305 NM_030782 TSC_hg19_v1_chr5_-_1345095	-150041	-	TSC_hg19_v1_chr5_-_1523908 AB244719 AB463849	28871	-	TSC_hg19_v1_chr5_-_1524086 NM_024830	28999	-	TSC_hg19_v1_chr5_-_1594617 BC150558	99568	-	BC020166|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AK090444|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##S46955|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##EF174603|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##M95167|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##NM_001044|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##AB045223|CLPTM1L|81037|CLPTM1-like##DQ892147|CLPTM1L|81037|CLPTM1-like##DQ895343|CLPTM1L|81037|CLPTM1-like##AK027306|CLPTM1L|81037|CLPTM1-like##BC025305|CLPTM1L|81037|CLPTM1-like##NM_030782|CLPTM1L|81037|CLPTM1-like##AB244719|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##NM_024830|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##BC150558|SDHAP3|728609|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3	0.416473	CTCF.p2:-95:0.281
chr6	32668406	32668529	reg1020887.p2	6.110	+	L34097 L34098 L34101 L34102 L34103 L34105 L34106 L34107 L40180 L42626 M17207 M22550 M59800 M59801 U66400 M17565 X00369 M35982 M57649 AF000447 U83585 AF291674 AY656681 M16996 X96420 M17563 M17564 AF522251 AB209580 TSC_hg19_v1_chr6_-_32634435 AK295476 AK295695 M60028 M20432 AK296613 AK316333 M25327 X03068 NM_001243961 NM_002123 M16276	-34027	-	AK130811 AK313975 NM_002122 TSC_hg19_v1_chr6_+_32605182 BC073977 BC051832 AB209628 X00452 L46875 L46876 L46877 L46878 L46879 L46880 L46881 U77589 M34996 M20431 L34082 L34083 L34084 L34085 L34090 L34094 M59802	-63224	+	AF010142 M16954 M16955 M16956 M16957 M16958 M16959 M17377 M17378 U31770 U17380 U17379 D86415 X99896 M28584 M30180 AF490771 AJ297582 AJ297583 AJ297584 AJ297585 AJ297587 AJ302075 AY626551 AY770514 AY935719 AY961062 AY961063 AY961064 AY961065 AY961066 AY961067 AY961069 AY961070 AY961071 AY961072 AY961073 AY961074 AY961076 AY961077 AY961078 DQ002917 DQ090958 EU375850 GQ891551 HM067843 HM067844 HM067847 HM067848 HM067849 HM067850 HM067852 HM067853 HM067854 HM067855 HM067856 HM067857 HM067858 HM067859 HM067860 HM067861 HM067862 HM067863 HM627215 M11161 M30179 AB528619 CU678949 CU689080 L02545 X99895 U84892 AJ697892 AJ697893 U95989 BC171883 M11867 M20504 M28583 L76133 U65585 BC033827 M20430 AB062112 M26038 BC007920 TSC_hg19_v1_chr6_-_32557583 M33600 BC108922 X12544 AK291499 X03069 AK225683 AK225690 AK289463 AK290388 BC008403 BC031023 AK291987 NM_001243965 NM_002124 AK293020	-110939	-	NM_020056 TSC_hg19_v1_chr6_+_32709167 L34094	40758	+	BC031995 AK098007 NM_001198858	62830	-	CR541811 CR541832 M26040 BC020226 AY645723 X03066 BC006097 AK301415 AK316197 NM_002120	116308	-	L34097|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34098|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34101|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34102|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34103|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34105|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34106|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L34107|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L40180|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##L42626|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M17207|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M22550|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M59800|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M59801|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##U66400|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M17565|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##X00369|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M35982|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M57649|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AF000447|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##U83585|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AF291674|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AY656681|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M16996|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##X96420|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M17563|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M17564|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AB209580|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK295476|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK295695|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M60028|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M20432|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK296613|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK316333|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M25327|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##X03068|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##NM_001243961|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##NM_002123|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##M16276|HLA-DQB1|3119|major histocompatibility complex, class II, DQ beta 1##AK130811|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##AK313975|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##NM_002122|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##BC073977|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##BC051832|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##AB209628|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##X00452|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L46875|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##U77589|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##M34996|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##M20431|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34082|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34083|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34084|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34085|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34090|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##L34094|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##M59802|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##AF010142|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M16954|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M16955|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M16956|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M16957|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M16958|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M16959|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M17377|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M17378|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##U31770|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##U17379|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##D86415|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M28584|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M30180|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AF490771|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AJ297582|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AJ297583|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AJ297585|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AJ297587|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY626551|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY770514|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY935719|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961062|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961063|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961064|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AY961065|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961066|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961067|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AY961070|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AY961072|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961073|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961076|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961077|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AY961078|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##DQ002917|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##DQ090958|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M11161|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M30179|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##L02545|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##X99895|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AJ697892|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AJ697893|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M11867|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M20504|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M28583|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##L76133|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##U65585|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC033827|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M20430|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AB062112|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M26038|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC007920|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##M33600|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC108922|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AK291499|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##X03069|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AK225683|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AK225690|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##AK289463|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC008403|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##BC031023|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AK291987|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##NM_001243965|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##NM_002124|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AK293020|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##NM_020056|HLA-DQA2|3118|major histocompatibility complex, class II, DQ alpha 2##L34094|HLA-DQA1|3117|major histocompatibility complex, class II, DQ alpha 1##BC031995|HLA-DQB2|3120|major histocompatibility complex, class II, DQ beta 2##AK098007|HLA-DQB2|3120|major histocompatibility complex, class II, DQ beta 2##NM_001198858|HLA-DQB2|3120|major histocompatibility complex, class II, DQ beta 2##CR541811|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##CR541832|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##M26040|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##BC020226|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##AY645723|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##X03066|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##BC006097|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##AK301415|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##AK316197|HLA-DOB|3112|major histocompatibility complex, class II, DO beta##NM_002120|HLA-DOB|3112|major histocompatibility complex, class II, DO beta	0.575388	CTCF.p2:3:0.575
chr17	38348000	38348135	reg1023146.p1	6.109	+	NM_016339	-13826	+	TSC_hg19_v1_chr17_+_38296796 CU690706	-51271	+	TSC_hg19_v1_chr17_+_38296779 BC030008	-51290	+	TSC_hg19_v1_chr17_+_38375614 AK289779 AK311544 AL834239 NM_133264 BC025965 AK315836 AK055057 AK290301 BC065551 AF370396	27547	+	AK313620 TSC_hg19_v1_chr17_+_38444130	96063	+	TSC_hg19_v1_chr17_+_38444134 NM_001254 U77949	96073	+	NM_016339|RAPGEFL1|51195|Rap guanine nucleotide exchange factor (GEF)-like 1##BC030008|CASC3|22794|cancer susceptibility candidate 3##AK289779|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK311544|WIPF2|147179|WAS/WASL interacting protein family, member 2##AL834239|WIPF2|147179|WAS/WASL interacting protein family, member 2##NM_133264|WIPF2|147179|WAS/WASL interacting protein family, member 2##BC025965|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK315836|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK055057|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK290301|WIPF2|147179|WAS/WASL interacting protein family, member 2##BC065551|WIPF2|147179|WAS/WASL interacting protein family, member 2##AF370396|WIPF2|147179|WAS/WASL interacting protein family, member 2##AK313620|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##NM_001254|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##U77949|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)	0.944283	CTCF.p2:-19:0.944
chr2	180989122	180989250	reg1022613.p2	6.109	+	BC031216 NM_020943 TSC_hg19_v1_chr2_-_180871834 AK025635 BC057826	-117372	-	TSC_hg19_v1_chr2_-_180726110 NM_152520	-263021	-	BC092423 TSC_hg19_v1_chr2_-_180726080	-263113	-	TSC_hg19_v1_chr2_+_181845341 NM_182678 NM_006357	856039	+	TSC_hg19_v1_chr2_+_181845369 BC092407	856184	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	856457	+	BC031216|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##NM_020943|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##AK025635|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##BC057826|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##NM_152520|ZNF385B|151126|zinc finger protein 385B##BC092423|ZNF385B|151126|zinc finger protein 385B##NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	0.992837	CTCF.p2:-16:0.993
chr5	49808993	49809152	reg1022641.p1	6.109	+	TSC_hg19_v1_chr5_-_49737229 NM_198449	-71829	-	AK300860 TSC_hg19_v1_chr5_-_49737200 BC059398	-71873	-	AF488549 NM_021072	-4112853	-	AK298680 AK314466 BC105789 NM_001178055	152660	+	NM_001178056 NM_024615 AK289369 TSC_hg19_v1_chr5_+_49962800 AL834477 BC075801	153719	+	TSC_hg19_v1_chr5_+_49962920 AB463183 AM393004	153855	+	NM_198449|EMB|133418|embigin##AK300860|EMB|133418|embigin##BC059398|EMB|133418|embigin##AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178056|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_024615|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK289369|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AL834477|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC075801|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AM393004|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	0.999203	CTCF.p2:-8:0.999
chr7	303580	303761	reg1008735.p3	6.109	+	BC040074 TSC_hg19_v1_chr7_+_193137	-110525	+	AF533706 NM_020223 TSC_hg19_v1_chr7_+_193043	-110653	+	None	None	None	NM_001195127	26465	+	TSC_hg19_v1_chr7_-_558849 AK292217	255164	-	X03795 X06374 TSC_hg19_v1_chr7_-_559093	255394	-	BC040074|FAM20C|56975|family with sequence similarity 20, member C##AF533706|FAM20C|56975|family with sequence similarity 20, member C##NM_020223|FAM20C|56975|family with sequence similarity 20, member C##NM_001195127|LOC100288524|100288524|forkhead box L1-like##AK292217|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X03795|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X06374|PDGFA|5154|platelet-derived growth factor alpha polypeptide	3.616593	CTCF.p2:-21:0.999	CTCF.p2:31:0.999	CTCF.p2:-74:0.999	CTCF.p2:84:0.620
chr11	18785942	18786071	reg1023061.p2	6.108	+	BC115396 BC115397 AK095113 NM_173588	-38259	-	TSC_hg19_v1_chr11_+_18720347 BC035692 NM_153347	-65658	+	TSC_hg19_v1_chr11_+_18720321 AK074600	-65703	+	AK294374 BC064807 AK316270 AK294673 BC039897 AK295604 AK090923 AX746685 AL832541 NM_001039970 NM_006906 NM_032781 TSC_hg19_v1_chr11_-_18813404	27259	-	BC096835 NM_147199	170540	-	BC063450 NM_054030	296221	-	BC115396|IGSF22|283284|immunoglobulin superfamily, member 22##BC115397|IGSF22|283284|immunoglobulin superfamily, member 22##AK095113|IGSF22|283284|immunoglobulin superfamily, member 22##NM_173588|IGSF22|283284|immunoglobulin superfamily, member 22##BC035692|TMEM86A|144110|transmembrane protein 86A##NM_153347|TMEM86A|144110|transmembrane protein 86A##AK074600|TMEM86A|144110|transmembrane protein 86A##AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC096835|MRGPRX1|259249|MAS-related GPR, member X1##NM_147199|MRGPRX1|259249|MAS-related GPR, member X1##BC063450|MRGPRX2|117194|MAS-related GPR, member X2##NM_054030|MRGPRX2|117194|MAS-related GPR, member X2	0.993038	CTCF.p2:0:0.993
chr13	109547691	109547824	reg1023957.p2	6.108	+	AB290159 AK127806 NM_001198950	-266188	+	AB020672 BC146791 NM_015011 AL834447	-299243	+	DQ857728 TSC_hg19_v1_chr13_+_108955871	-591940	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	891151	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	1254978	-	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	1411752	-	AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1	0.940851	CTCF.p2:-1:0.941
chr19	5338845	5338971	reg1023546.p1	6.108	+	TSC_hg19_v1_chr19_+_5032899 CU687848	-306009	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-369735	+	NM_015015 TSC_hg19_v1_chr19_+_4969124	-369784	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	1886	-	AK098722 NM_181710 AK292251 BC017592	116518	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	283850	-	AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##NM_015015|KDM4B|23030|lysine (K)-specific demethylase 4B##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2	0.0	
chr2	9511638	9511784	reg1026369.p1	6.108	+	TSC_hg19_v1_chr2_+_9346940 BC063308	-164752	+	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	-164819	+	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	-367890	-	TSC_hg19_v1_chr2_-_9563308 AK093179	51631	-	AK092115 AX747361 TSC_hg19_v1_chr2_-_9563586	51874	-	TSC_hg19_v1_chr2_-_9563587 BC012264 AK299017 AK289817 BX647099 AF012023 AF012024 NM_004763 NM_022334	51903	-	BC063308|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK093179|ITGB1BP1|9270|integrin beta 1 binding protein 1##AK092115|ITGB1BP1|9270|integrin beta 1 binding protein 1##BC012264|ITGB1BP1|9270|integrin beta 1 binding protein 1##AK299017|ITGB1BP1|9270|integrin beta 1 binding protein 1##AK289817|ITGB1BP1|9270|integrin beta 1 binding protein 1##BX647099|ITGB1BP1|9270|integrin beta 1 binding protein 1##AF012023|ITGB1BP1|9270|integrin beta 1 binding protein 1##AF012024|ITGB1BP1|9270|integrin beta 1 binding protein 1##NM_004763|ITGB1BP1|9270|integrin beta 1 binding protein 1##NM_022334|ITGB1BP1|9270|integrin beta 1 binding protein 1	0.731892	CTCF.p2:8:0.732
chr4	153375707	153375856	reg1019454.p1	6.108	+	NM_001013415 AY008274	-72117	-	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	-101885	-	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	-693640	-	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	80513	-	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	81652	+	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	225419	-	NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154	0.726586	CTCF.p2:-24:0.727
chr9	94741176	94741286	reg1022559.p2	6.108	+	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	-28842	-	TSC_hg19_v1_chr9_-_94711095 BC033697	-30103	-	TSC_hg19_v1_chr9_-_94186159 NM_005384	-555049	-	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	136433	-	TSC_hg19_v1_chr9_-_95055945 AB209234 D28473 AK293014	314707	-	U04953 TSC_hg19_v1_chr9_-_95055976 BX647236 AK308202 BX647430 NM_013417 BX537417 BX537429 BX538109 BX647071 BX648567	314744	-	BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_005384|NFIL3|4783|nuclear factor, interleukin 3 regulated##AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AB209234|IARS|3376|isoleucyl-tRNA synthetase##D28473|IARS|3376|isoleucyl-tRNA synthetase##AK293014|IARS|3376|isoleucyl-tRNA synthetase##U04953|IARS|3376|isoleucyl-tRNA synthetase##BX647236|IARS|3376|isoleucyl-tRNA synthetase##AK308202|IARS|3376|isoleucyl-tRNA synthetase##BX647430|IARS|3376|isoleucyl-tRNA synthetase##NM_013417|IARS|3376|isoleucyl-tRNA synthetase##BX537417|IARS|3376|isoleucyl-tRNA synthetase##BX537429|IARS|3376|isoleucyl-tRNA synthetase##BX538109|IARS|3376|isoleucyl-tRNA synthetase##BX647071|IARS|3376|isoleucyl-tRNA synthetase##BX648567|IARS|3376|isoleucyl-tRNA synthetase	0.860069	CTCF.p2:-4:0.836
chr10	43574507	43574612	reg1023613.p1	6.107	+	TSC_hg19_v1_chr10_+_43572516 NM_020630 NM_020975 BC003072 BC004257 X15262 AK291807 AB384817 CU678360 CU678648 Y12528	-1956	+	TSC_hg19_v1_chr10_+_43278248 AK308420 BC043345	-296309	+	NM_014753	-296606	+	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	59383	+	BC022548 NM_145313	187807	-	BC054876 AY358584 NM_001184963 NM_173160	292531	+	NM_020630|RET|5979|ret proto-oncogene##NM_020975|RET|5979|ret proto-oncogene##BC003072|RET|5979|ret proto-oncogene##BC004257|RET|5979|ret proto-oncogene##X15262|RET|5979|ret proto-oncogene##AK291807|RET|5979|ret proto-oncogene##Y12528|RET|5979|ret proto-oncogene##AK308420|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC043345|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##NM_014753|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC022548|RASGEF1A|221002|RasGEF domain family, member 1A##NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A##BC054876|FXYD4|53828|FXYD domain containing ion transport regulator 4##AY358584|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001184963|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_173160|FXYD4|53828|FXYD domain containing ion transport regulator 4	0.776291	CTCF.p2:-14:0.776
chr16	68881318	68881454	reg1019246.p1	6.107	+	TSC_hg19_v1_chr16_+_68877504 BC092500 AB051533 NM_024562 AB463318	-3881	+	TSC_hg19_v1_chr16_+_68771304 Z18923	-110075	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	-110141	+	AK291400 NM_001199280	258080	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	258754	+	AF234839 NM_005329	260056	+	BC092500|TMCO7|79613|transmembrane and coiled-coil domains 7##AB051533|TMCO7|79613|transmembrane and coiled-coil domains 7##NM_024562|TMCO7|79613|transmembrane and coiled-coil domains 7##Z18923|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3##AF234839|HAS3|3038|hyaluronan synthase 3##NM_005329|HAS3|3038|hyaluronan synthase 3	0.996529	CTCF.p2:-38:0.997
chr18	72366740	72366860	reg1022345.p1	6.107	+	NM_001146189 NM_001146190 NM_017757	-23882	+	TSC_hg19_v1_chr18_+_72265126 AK056288	-101669	+	TSC_hg19_v1_chr18_-_72265072 BC036588	-101740	-	TSC_hg19_v1_chr18_-_72920993 CU687330 CU689738	554201	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	554312	-	BC018081 NM_175907 TSC_hg19_v1_chr18_-_72921324	554505	-	NM_001146189|ZNF407|55628|zinc finger protein 407##NM_001146190|ZNF407|55628|zinc finger protein 407##NM_017757|ZNF407|55628|zinc finger protein 407##AK056288|ZNF407|55628|zinc finger protein 407##BC036588|LOC400657|400657|uncharacterized LOC400657##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	0.762713	CTCF.p2:-13:0.763
chr3	112691131	112691251	reg1022681.p2	6.107	+	BC144504 BC144507 AY284976 AY552790 NM_001008784 NM_001199215	-126399	-	AY548106 AY548107 TSC_hg19_v1_chr3_-_112359991 BC110842 AY526612 NM_199511 NM_199512 AK304561	-331214	-	BX647117 TSC_hg19_v1_chr3_-_112359888 BC116178 BC116179 AY333429 AF506819	-331308	-	AF283760 BC069661 BC069721 BC069743 AF495380 AF497548 AF497549 AF497550 BC093890 BC143393 AK304426 AK293071 AY284975 AK126349 NM_138806 NM_138939 NM_138940 NM_170780 AY358910	2644	-	TSC_hg19_v1_chr3_+_112709777 AK292651	18587	+	NM_014170 NM_138485 BC037163 TSC_hg19_v1_chr3_+_112709842 BC000003 AF161484 BC010137 AK289611 CU691454 DQ892307 DQ895506	18631	+	BC144504|CD200R1L|344807|CD200 receptor 1-like##BC144507|CD200R1L|344807|CD200 receptor 1-like##AY284976|CD200R1L|344807|CD200 receptor 1-like##AY552790|CD200R1L|344807|CD200 receptor 1-like##NM_001008784|CD200R1L|344807|CD200 receptor 1-like##NM_001199215|CD200R1L|344807|CD200 receptor 1-like##AY548106|CCDC80|151887|coiled-coil domain containing 80##AY548107|CCDC80|151887|coiled-coil domain containing 80##BC110842|CCDC80|151887|coiled-coil domain containing 80##AY526612|CCDC80|151887|coiled-coil domain containing 80##NM_199511|CCDC80|151887|coiled-coil domain containing 80##NM_199512|CCDC80|151887|coiled-coil domain containing 80##AK304561|CCDC80|151887|coiled-coil domain containing 80##BX647117|CCDC80|151887|coiled-coil domain containing 80##BC116178|CCDC80|151887|coiled-coil domain containing 80##BC116179|CCDC80|151887|coiled-coil domain containing 80##AY333429|CCDC80|151887|coiled-coil domain containing 80##AF506819|CCDC80|151887|coiled-coil domain containing 80##AF283760|CD200R1|131450|CD200 receptor 1##BC069661|CD200R1|131450|CD200 receptor 1##BC069721|CD200R1|131450|CD200 receptor 1##BC069743|CD200R1|131450|CD200 receptor 1##AF495380|CD200R1|131450|CD200 receptor 1##AF497548|CD200R1|131450|CD200 receptor 1##AF497549|CD200R1|131450|CD200 receptor 1##AF497550|CD200R1|131450|CD200 receptor 1##BC093890|CD200R1|131450|CD200 receptor 1##BC143393|CD200R1|131450|CD200 receptor 1##AK304426|CD200R1|131450|CD200 receptor 1##AK293071|CD200R1|131450|CD200 receptor 1##AY284975|CD200R1|131450|CD200 receptor 1##AK126349|CD200R1|131450|CD200 receptor 1##NM_138806|CD200R1|131450|CD200 receptor 1##NM_138939|CD200R1|131450|CD200 receptor 1##NM_138940|CD200R1|131450|CD200 receptor 1##NM_170780|CD200R1|131450|CD200 receptor 1##AY358910|CD200R1|131450|CD200 receptor 1##AK292651|GTPBP8|29083|GTP-binding protein 8 (putative)##NM_014170|GTPBP8|29083|GTP-binding protein 8 (putative)##NM_138485|GTPBP8|29083|GTP-binding protein 8 (putative)##BC037163|GTPBP8|29083|GTP-binding protein 8 (putative)##BC000003|GTPBP8|29083|GTP-binding protein 8 (putative)##AF161484|GTPBP8|29083|GTP-binding protein 8 (putative)##BC010137|GTPBP8|29083|GTP-binding protein 8 (putative)##AK289611|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ892307|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ895506|GTPBP8|29083|GTP-binding protein 8 (putative)	0.208535	CTCF.p2:22:0.209
chr4	42282500	42282629	reg1024038.p1	6.107	+	AB126828 AB126829 NM_001159547 NM_207406	-127670	-	TSC_hg19_v1_chr4_-_42154719 AK125953 AB463533	-127908	-	TSC_hg19_v1_chr4_-_42154134 BC128592 BC128593	-128404	-	NM_001080505	117291	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	376524	-	AB528853 NM_001080476	612717	+	AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##AK125953|BEND4|389206|BEN domain containing 4##BC128592|BEND4|389206|BEN domain containing 4##BC128593|BEND4|389206|BEN domain containing 4##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1	0.990559	CTCF.p2:-6:0.991
chr10	78063621	78063727	reg1024394.p2	6.106	+	AF267860 NM_032024	-521156	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-902109	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-902193	-	AF118141 TSC_hg19_v1_chr10_-_79397246	1333551	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	1333662	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	1333732	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.203863	CTCF.p2:12:0.204
chr11	65307719	65307864	reg1006992.p1	6.106	+	TSC_hg19_v1_chr11_+_65292576 AF297709 BC069233 AK314945 AK302198 AB047077 AB051427 AB051428	-15191	+	TSC_hg19_v1_chr11_+_65292533 NM_001048218 NM_020680	-15254	+	TSC_hg19_v1_chr11_+_65271764 AF001540	-36281	+	TSC_hg19_v1_chr11_-_65314049 AK090750	6318	-	TSC_hg19_v1_chr11_-_65325391 AF135960 BC136277	17658	-	TSC_hg19_v1_chr11_-_65325673 AK024477 NM_001130144 NM_001164266 NM_021070	18077	-	AF297709|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##BC069233|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK314945|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK302198|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB047077|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB051427|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB051428|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##NM_001048218|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##NM_020680|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK090750|LTBP3|4054|latent transforming growth factor beta binding protein 3##AF135960|LTBP3|4054|latent transforming growth factor beta binding protein 3##BC136277|LTBP3|4054|latent transforming growth factor beta binding protein 3##AK024477|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_001130144|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_001164266|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_021070|LTBP3|4054|latent transforming growth factor beta binding protein 3	0.0	
chr16	30538985	30539091	reg1020129.p2	6.106	+	TSC_hg19_v1_chr16_-_30538096 AK295274	-956	-	TSC_hg19_v1_chr16_-_30537922 BC013760 NM_024671	-1147	-	AK027089 AK315449 TSC_hg19_v1_chr16_-_30537813 BC092403	-1288	-	TSC_hg19_v1_chr16_-_30546003 AK292192	6962	-	TSC_hg19_v1_chr16_-_30546234 AB209546 AK299308 AK054567 BC001361 NM_023931 AK316254	7152	-	EU446557 BC008821 AK093992 AX748400 NM_001172679 NM_033410 TSC_hg19_v1_chr16_-_30569709	30570	-	AK295274|ZNF768|79724|zinc finger protein 768##BC013760|ZNF768|79724|zinc finger protein 768##NM_024671|ZNF768|79724|zinc finger protein 768##AK027089|ZNF768|79724|zinc finger protein 768##AK315449|ZNF768|79724|zinc finger protein 768##BC092403|ZNF768|79724|zinc finger protein 768##AK292192|ZNF747|65988|zinc finger protein 747##AB209546|ZNF747|65988|zinc finger protein 747##AK054567|ZNF747|65988|zinc finger protein 747##BC001361|ZNF747|65988|zinc finger protein 747##NM_023931|ZNF747|65988|zinc finger protein 747##EU446557|ZNF764|92595|zinc finger protein 764##BC008821|ZNF764|92595|zinc finger protein 764##AK093992|ZNF764|92595|zinc finger protein 764##NM_001172679|ZNF764|92595|zinc finger protein 764##NM_033410|ZNF764|92595|zinc finger protein 764	0.0	
chr5	21919685	21919800	reg1024114.p1	6.106	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	-460094	+	TSC_hg19_v1_chr5_+_21459621 AK290693	-460133	+	AK295087 BC031051 NM_001167667 NM_004934	-1931420	-	TSC_hg19_v1_chr5_-_22212879 AK314800	293139	-	BC047608 TSC_hg19_v1_chr5_-_22853454	933704	-	L33477 NM_004061	933988	-	BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	0.319998	CTCF.p2:-12:0.320
chr4	94120885	94120990	reg1023744.p2	6.105	+	AB209318 NM_001510 AK308611	-895345	+	BC051694 NM_207491	-2964756	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-3072219	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	629124	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	1007874	+	TSC_hg19_v1_chr4_+_95129015 NM_001128429 NM_020159 BC045534 AY008271 BC041800	1008177	+	AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.990537	CTCF.p2:-6:0.991
chr6_mcf_hap5	3762145	3762235	reg1021024.p1	6.105	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.101968	
chr11	106004408	106004520	reg1024527.p1	6.104	+	NM_152433 NM_198439	-56000	-	AF136978 AF151057 AF151838 AF302110 NM_015423 TSC_hg19_v1_chr11_+_105948388 BC016728 AK312529 BC015470 AK293362 AB463408 CU677695 DQ891342 DQ894524	-56099	+	TSC_hg19_v1_chr11_-_105892952 AL834523 BC041118 AB058729 NM_032424	-111505	-	BC085622 TSC_hg19_v1_chr11_-_106889260 BC130484 BC130488 BC144033 NM_000855 X63282 Z50053	884624	-	AK293001 TSC_hg19_v1_chr11_-_107328552 BX649022 BX647832 BC107418 BC070142 BX648704 AK126881 NM_152434	1324075	-	AK293603 TSC_hg19_v1_chr11_-_107436464 BC015183 AK304413 AB218768 AK095523 NM_138775	1431980	-	NM_152433|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##NM_198439|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##AF136978|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151057|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151838|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF302110|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##NM_015423|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC016728|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK312529|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC015470|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK293362|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ891342|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ894524|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AL834523|KIAA1826|84437|KIAA1826##BC041118|KIAA1826|84437|KIAA1826##AB058729|KIAA1826|84437|KIAA1826##NM_032424|KIAA1826|84437|KIAA1826##BC130484|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC130488|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC144033|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_000855|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##X63282|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##Z50053|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##AK293001|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX649022|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX647832|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC107418|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC070142|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX648704|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK126881|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##NM_152434|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK293603|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##BC015183|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK304413|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AB218768|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK095523|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##NM_138775|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)	0.110006	
chr11	19348132	19348274	reg1026548.p1	6.104	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-85002	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-85728	-	U20324 U72899 U49837 BC057221 NM_001127656 TSC_hg19_v1_chr11_-_19223531 AK313289 NM_003476 AF121260	-124645	-	AB063115 NM_001111018 AJ488205	24112	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	386663	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	696185	+	AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##U20324|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U72899|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U49837|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##BC057221|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_001127656|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AK313289|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_003476|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AF121260|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2	0.044416	
chr1	178511990	178512103	reg1006827.p3	6.104	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-29780	+	AF047711 NM_004841 AK290308	-201412	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-448405	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	182327	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	328100	-	TSC_hg19_v1_chr1_+_178995028 AB007944	482974	+	AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##BC110611|RASAL2|9462|RAS protein activator like 2##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##AB007944|FAM20B|9917|family with sequence similarity 20, member B	0.0	
chr5	175331730	175331835	reg1023579.p2	6.104	+	TSC_hg19_v1_chr5_+_175308843 AL512758 AK126590	-22857	+	TSC_hg19_v1_chr5_+_175298607 AK293819	-33172	+	TSC_hg19_v1_chr5_+_175298551 AK314177	-33237	+	TSC_hg19_v1_chr5_-_175395273 BC068499 BC066325 BC006849	63370	-	NM_032361	63762	-	BC028606 NM_001079529	180096	+	AL512758|CPLX2|10814|complexin 2##AK126590|CPLX2|10814|complexin 2##AK293819|CPLX2|10814|complexin 2##AK314177|CPLX2|10814|complexin 2##BC068499|THOC3|84321|THO complex 3##BC066325|THOC3|84321|THO complex 3##BC006849|THOC3|84321|THO complex 3##NM_032361|THOC3|84321|THO complex 3##BC028606|FAM153B|202134|family with sequence similarity 153, member B##NM_001079529|FAM153B|202134|family with sequence similarity 153, member B	0.386464	CTCF.p2:5:0.386
chr6	29557351	29557441	reg1021368.p1	6.104	+	BC101683 BC112176 NM_007160 EU446925 BC069146	-1695	+	AF123050 NM_006398	-29695	-	CU680336 DQ894624 Y12653 BC012472 TSC_hg19_v1_chr6_-_29527510 AK311914	-29903	-	AJ225029 TSC_hg19_v1_chr6_-_29595787 BC050532 BC042598 AK312308 AK223619 AK290191 BC041332 BC051463	38384	-	TSC_hg19_v1_chr6_-_29595936 NM_021903	38573	-	AJ012288 TSC_hg19_v1_chr6_-_29600682 AB208790 AF099148	43299	-	BC101683|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2##BC112176|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2##NM_007160|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2##EU446925|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2##BC069146|OR2H2|7932|olfactory receptor, family 2, subfamily H, member 2##AF123050|UBD|10537|ubiquitin D##NM_006398|UBD|10537|ubiquitin D##DQ894624|UBD|10537|ubiquitin D##Y12653|UBD|10537|ubiquitin D##BC012472|UBD|10537|ubiquitin D##AK311914|UBD|10537|ubiquitin D##AJ225029|GABBR1|2550|gamma-aminobutyric acid (GABA) B receptor, 1##BC050532|GABBR1|2550|gamma-aminobutyric acid (GABA) B receptor, 1##BC042598|GABBR1|2550|gamma-aminobutyric acid (GABA) B receptor, 1##AK312308|GABBR1|2550|gamma-aminobutyric acid (GABA) B receptor, 1##AK223619|GABBR1|2550|gamma-aminobutyric acid (GABA) B receptor, 1##AK290191|GABBR1|2550|gamma-aminobutyric acid (GABA) B receptor, 1##BC041332|GABBR1|2550|gamma-aminobutyric acid (GABA) B receptor, 1##NM_021903|GABBR1|2550|gamma-aminobutyric acid (GABA) B receptor, 1##AJ012288|GABBR1|2550|gamma-aminobutyric acid (GABA) B receptor, 1##AB208790|GABBR1|2550|gamma-aminobutyric acid (GABA) B receptor, 1##AF099148|GABBR1|2550|gamma-aminobutyric acid (GABA) B receptor, 1	0.57731	CTCF.p2:11:0.577
chr6_cox_hap2	1076152	1076250	reg1021317.p1	6.104	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.57731	CTCF.p2:15:0.577
chr8	27221304	27221429	reg1023728.p1	6.104	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-38289	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-38314	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-38349	+	AK314787 U62431 NM_000742	115405	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	127292	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	250839	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	0.0	
chr9	31800127	31800250	reg1022803.p1	6.104	+	AK056372 NM_152570	-3080886	-	AK057806 JN681271 NM_145005	-4226347	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-4226717	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	584402	+	TSC_hg19_v1_chr9_+_32384622 AK057904	584439	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	584461	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.447271	CTCF.p2:17:0.447
chr13	77459355	77459464	reg1021706.p3	6.103	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-1124569	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-1248939	+	AF330045 NM_005358	-1264840	+	BC013764 TSC_hg19_v1_chr13_-_77460431	991	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	1198	-	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	106760	+	NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5	0.066009	
chr15	23712280	23712419	reg1023987.p1	6.103	+	TSC_hg19_v1_chr15_-_23378229 AF041081 AF041080	-334105	-	TSC_hg19_v1_chr15_-_23378205 AK308640	-334159	-	DQ309040 BC048987 TSC_hg19_v1_chr15_-_23208467	-503938	-	NM_005664	98104	+	AK309383 TSC_hg19_v1_chr15_+_23810820 BC044639 BC013970 BC070293 EU446987 CU692226	98519	+	NM_019066 TSC_hg19_v1_chr15_-_23893004	180655	-	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041080|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AK308640|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##DQ309040|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC048987|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##NM_005664|MKRN3|7681|makorin ring finger protein 3##BC044639|MKRN3|7681|makorin ring finger protein 3##BC070293|MKRN3|7681|makorin ring finger protein 3##EU446987|MKRN3|7681|makorin ring finger protein 3##NM_019066|MAGEL2|54551|MAGE-like 2	0.03265	
chr17	16825825	16825927	reg1018654.p1	6.103	+	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-232272	+	AK131401 NM_020787	-268715	-	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-353380	-	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	49528	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	120088	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	283737	-	EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6	0.260241	CTCF.p2:-34:0.260
chr4	81257054	81257180	reg1024868.p1	6.103	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-220	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	-69258	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	-138463	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	695025	+	AB528214 D70899 NM_006259 X94612	869090	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	1135866	-	BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B	0.084079	
chr5	38383076	38383182	reg1022094.p1	6.103	+	CU687828 TSC_hg19_v1_chr5_+_38258922	-124240	+	BX647551 TSC_hg19_v1_chr5_+_38258660 BC063822 AK291602	-124463	+	NM_001205301 NM_152403 AK096474 TSC_hg19_v1_chr5_+_38258532	-124606	+	NM_182798 AK097549 BC031251	20512	+	NM_182801 BC033177 AK092994 AX747843 BC033188	62495	+	TSC_hg19_v1_chr5_-_38556749 AK290059 NM_001127671	173599	-	BX647551|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC063822|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK291602|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_001205301|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_152403|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK096474|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_182801|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033177|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK092994|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033188|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha	0.99916	CTCF.p2:-13:0.999
chr8	137763944	137764103	reg1022069.p1	6.103	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-1293822	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-1294365	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-2038749	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	1745083	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2162221	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	2951259	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.975076	CTCF.p2:10:0.975
chr15	82576811	82576932	reg1024563.p1	6.102	+	TSC_hg19_v1_chr15_+_82555158 AL833762 NM_001008226 BC144647 AK304339	-21718	+	TSC_hg19_v1_chr15_-_82555076 NM_001040610 NM_024580	-21782	-	BC014628 TSC_hg19_v1_chr15_-_82555043 AK300348 AK056656 BX538332	-21840	-	NM_001164465	64834	-	TSC_hg19_v1_chr15_+_82647308 BC066934	70460	+	NM_198181 CR936812	145345	+	AL833762|FAM154B|283726|family with sequence similarity 154, member B##NM_001008226|FAM154B|283726|family with sequence similarity 154, member B##AK304339|FAM154B|283726|family with sequence similarity 154, member B##NM_001040610|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_024580|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BC014628|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK300348|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK056656|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BX538332|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9	0.800468	CTCF.p2:6:0.800
chr16	67383202	67383327	reg1023647.p1	6.102	+	AK311487 NM_001161575 AK297329 AK309897 AK001866 AK292311 AY313780 AK301766	-1986	+	TSC_hg19_v1_chr16_+_67360728 AY963267 BC026156 NM_018296 BC018031	-22512	+	BC070103 BC094790 AK302748 AK302567 BC117335 NM_001100915 AK097481	-22620	-	TSC_hg19_v1_chr16_-_67427402 AF132972 AF078846 BC000691 NM_015964 NM_016140	44115	-	TSC_hg19_v1_chr16_-_67450360 NM_013304 U90653 BC021908	67033	-	TSC_hg19_v1_chr16_+_67465023 U26726 BC036780 BC064536 NM_000196 U14631	81766	+	AK311487|LRRC36|55282|leucine rich repeat containing 36##NM_001161575|LRRC36|55282|leucine rich repeat containing 36##AK297329|LRRC36|55282|leucine rich repeat containing 36##AK309897|LRRC36|55282|leucine rich repeat containing 36##AK001866|LRRC36|55282|leucine rich repeat containing 36##AK292311|LRRC36|55282|leucine rich repeat containing 36##AY313780|LRRC36|55282|leucine rich repeat containing 36##AK301766|LRRC36|55282|leucine rich repeat containing 36##AY963267|LRRC36|55282|leucine rich repeat containing 36##BC026156|LRRC36|55282|leucine rich repeat containing 36##NM_018296|LRRC36|55282|leucine rich repeat containing 36##BC018031|LRRC36|55282|leucine rich repeat containing 36##BC070103|KCTD19|146212|potassium channel tetramerisation domain containing 19##BC094790|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK302748|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK302567|KCTD19|146212|potassium channel tetramerisation domain containing 19##BC117335|KCTD19|146212|potassium channel tetramerisation domain containing 19##NM_001100915|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK097481|KCTD19|146212|potassium channel tetramerisation domain containing 19##AF132972|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AF078846|TPPP3|51673|tubulin polymerization-promoting protein family member 3##BC000691|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_015964|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_016140|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_013304|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U90653|ZDHHC1|29800|zinc finger, DHHC-type containing 1##BC021908|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2	0.068267	
chr19	16696867	16697047	reg1020146.p2	6.102	+	TSC_hg19_v1_chr19_+_16683381 AK094229	-13560	+	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	-13761	-	TSC_hg19_v1_chr19_-_16653256 NM_006387	-43694	-	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	42043	-	TSC_hg19_v1_chr19_-_16770944 AK025602 BC069279 BX648276	73972	-	TSC_hg19_v1_chr19_-_16770956 NM_024104	74005	-	BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##NM_006387|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26##AK025602|C19orf42|79086|chromosome 19 open reading frame 42##BC069279|C19orf42|79086|chromosome 19 open reading frame 42##BX648276|C19orf42|79086|chromosome 19 open reading frame 42##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42	0.0	
chr22	32536852	32536955	reg1023012.p2	6.102	+	TSC_hg19_v1_chr22_+_32439250 M24847 BC139838 BC139839 CU013176 CU013464 AB463272	-97645	+	TSC_hg19_v1_chr22_+_32439229 CR456579	-97680	+	TSC_hg19_v1_chr22_+_32439103 AK312948	-97790	+	BC139845 CU012997 CU013285 AB527618 CR456485 NM_001010859 BC040263	18351	-	BC069827 BC069737 AJ010231 NM_006605	52522	-	CR456563 NM_001159546	61613	-	M24847|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139838|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139839|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CU013176|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CU013464|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CR456579|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##AK312948|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139845|C22orf42|150297|chromosome 22 open reading frame 42##CR456485|C22orf42|150297|chromosome 22 open reading frame 42##NM_001010859|C22orf42|150297|chromosome 22 open reading frame 42##BC040263|C22orf42|150297|chromosome 22 open reading frame 42##BC069827|RFPL2|10739|ret finger protein-like 2##BC069737|RFPL2|10739|ret finger protein-like 2##AJ010231|RFPL2|10739|ret finger protein-like 2##NM_006605|RFPL2|10739|ret finger protein-like 2##CR456563|RFPL2|10739|ret finger protein-like 2##NM_001159546|RFPL2|10739|ret finger protein-like 2	0.996354	CTCF.p2:-13:0.996
chrX	127915644	127915747	reg1021730.p1	6.102	+	AY251532 BC014597 NM_138289	-729335	-	NM_001122716	-1961949	+	TSC_hg19_v1_chrX_-_125686794 BC035674 NM_178470	-2228879	-	BC117447 BC143954 BC143955 AK026426 TSC_hg19_v1_chrX_-_128657421	741713	-	EU636009 TSC_hg19_v1_chrX_-_128657443	741749	-	TSC_hg19_v1_chrX_-_128657468 NM_003069 NM_139035	741767	-	AY251532|ACTRT1|139741|actin-related protein T1##BC014597|ACTRT1|139741|actin-related protein T1##NM_138289|ACTRT1|139741|actin-related protein T1##NM_001122716|CXorf64|100130613|chromosome X open reading frame 64##BC035674|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##NM_178470|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##BC117447|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC143954|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC143955|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##AK026426|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##EU636009|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_003069|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_139035|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	0.998824	CTCF.p2:-12:0.999
chr10	73030200	73030295	reg1022858.p1	6.101	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-57867	+	NM_000281	-381707	-	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	-381945	-	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	48778	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	48799	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	126491	+	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_000281|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23	0.981819	CTCF.p2:-1:0.982
chr11	27205793	27205973	reg1000447.p2	6.101	+	NM_003986	-143375	+	TSC_hg19_v1_chr11_+_27015837 BC026873	-190039	+	TSC_hg19_v1_chr11_+_27015673 AK310616	-190213	+	AF382034 TSC_hg19_v1_chr11_-_27384763 AY598334 CU678989 AK313358 BC008496 AK308494 NM_030771 NM_080654	178883	-	TSC_hg19_v1_chr11_-_27494323 AB209743 AF257182 BC033039 NM_018490	288421	-	AB385247 BC053907 TSC_hg19_v1_chr11_-_27528315 BC009774 AK223156 AL833601 AK002077 NM_018362	322429	-	NM_003986|BBOX1|8424|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1##BC026873|FIBIN|387758|fin bud initiation factor homolog (zebrafish)##AF382034|CCDC34|91057|coiled-coil domain containing 34##AY598334|CCDC34|91057|coiled-coil domain containing 34##AK313358|CCDC34|91057|coiled-coil domain containing 34##BC008496|CCDC34|91057|coiled-coil domain containing 34##AK308494|CCDC34|91057|coiled-coil domain containing 34##NM_030771|CCDC34|91057|coiled-coil domain containing 34##NM_080654|CCDC34|91057|coiled-coil domain containing 34##AB209743|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF257182|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC033039|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##NM_018490|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)##BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)##AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)##AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)##AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)##NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)	0.0	
chr11	43526224	43526326	reg1022855.p1	6.101	+	TSC_hg19_v1_chr11_+_43380492 AK001752 BC017238 BC033000	-145783	+	TSC_hg19_v1_chr11_+_43380403 NM_018259	-145857	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	-192635	+	TSC_hg19_v1_chr11_+_43665785 AK095484	139509	+	NM_016142 TSC_hg19_v1_chr11_+_43702287 AK027882 AK075011 AK292625 AK075216 AK074952 AF078850 BC012043 AK222881 AK301663 BC012536 EU176708	175983	+	TSC_hg19_v1_chr11_+_43902380 NM_139178 AK315266 AB042029 BC067257	376118	+	AK001752|TTC17|55761|tetratricopeptide repeat domain 17##BC017238|TTC17|55761|tetratricopeptide repeat domain 17##BC033000|TTC17|55761|tetratricopeptide repeat domain 17##NM_018259|TTC17|55761|tetratricopeptide repeat domain 17##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5##NM_016142|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK027882|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075011|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK292625|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075216|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK074952|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AF078850|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012043|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK222881|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK301663|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012536|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##EU176708|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##NM_139178|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AK315266|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AB042029|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##BC067257|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)	0.606088	CTCF.p2:0:0.582
chr17	8843317	8843478	reg1022958.p2	6.101	+	AY725853 AF128881 NM_014308	-27581	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-72413	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-140845	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	25584	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	81570	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	635734	-	AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8	0.0	
chr5	1511936	1512025	reg1022100.p2	6.101	+	CU676500 BC020166 AK090444 TSC_hg19_v1_chr5_-_1494996	-17046	-	S46955 EF174603 M95167 NM_001044	-66454	-	AB045223 DQ892147 DQ895343 AK027306 BC025305 NM_030782 TSC_hg19_v1_chr5_-_1345095	-166958	-	TSC_hg19_v1_chr5_-_1523908 AB244719 AB463849	11954	-	TSC_hg19_v1_chr5_-_1524086 NM_024830	12082	-	TSC_hg19_v1_chr5_-_1594617 BC150558	82651	-	BC020166|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AK090444|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##S46955|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##EF174603|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##M95167|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##NM_001044|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##AB045223|CLPTM1L|81037|CLPTM1-like##DQ892147|CLPTM1L|81037|CLPTM1-like##DQ895343|CLPTM1L|81037|CLPTM1-like##AK027306|CLPTM1L|81037|CLPTM1-like##BC025305|CLPTM1L|81037|CLPTM1-like##NM_030782|CLPTM1L|81037|CLPTM1-like##AB244719|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##NM_024830|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##BC150558|SDHAP3|728609|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3	0.609615	CTCF.p2:-10:0.594
chr11	100558632	100558746	reg1024817.p1	6.100	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	-561	+	AB013802 AB013803 NM_175566	-1131816	+	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	-1666940	+	AK314174 AF247167 NM_032021	304075	+	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	441110	-	AK304853 TSC_hg19_v1_chr11_-_101000531 NM_000926	441814	-	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor##AK304853|PGR|5241|progesterone receptor##NM_000926|PGR|5241|progesterone receptor	0.0	
chr11	76322169	76322290	reg1023412.p2	6.100	+	TSC_hg19_v1_chr11_+_76156061 AK304043 BC033404 NM_020193 AK309621 BC021688 AK125114	-166126	+	TSC_hg19_v1_chr11_-_76155721 AK054718	-166504	-	TSC_hg19_v1_chr11_+_76092383 AK125821 BC040665 AK095089	-229806	+	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	58739	-	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	59580	-	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	172048	+	AK304043|C11orf30|56946|chromosome 11 open reading frame 30##BC033404|C11orf30|56946|chromosome 11 open reading frame 30##NM_020193|C11orf30|56946|chromosome 11 open reading frame 30##AK309621|C11orf30|56946|chromosome 11 open reading frame 30##BC021688|C11orf30|56946|chromosome 11 open reading frame 30##AK125114|C11orf30|56946|chromosome 11 open reading frame 30##AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)	0.162825	
chr17	37886654	37886756	reg1008923.p1	6.100	+	AK313683 TSC_hg19_v1_chr17_+_37856310 BC080193 AF177761 BC167147	-30323	+	NM_004448 TSC_hg19_v1_chr17_+_37856270	-30443	+	TSC_hg19_v1_chr17_+_37856228 AK300321	-30478	+	TSC_hg19_v1_chr17_-_37886762 BC063395 AF490253 BC006006 BC106016	49	-	TSC_hg19_v1_chr17_-_37886786 NM_032339 AY508814	94	-	NM_005310 TSC_hg19_v1_chr17_+_37894190 AK314368	7473	+	AK313683|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##BC080193|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##AF177761|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##BC167147|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##NM_004448|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##AK300321|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##AF490253|MIEN1|84299|migration and invasion enhancer 1##BC006006|MIEN1|84299|migration and invasion enhancer 1##BC106016|MIEN1|84299|migration and invasion enhancer 1##NM_032339|MIEN1|84299|migration and invasion enhancer 1##AY508814|MIEN1|84299|migration and invasion enhancer 1##NM_005310|GRB7|2886|growth factor receptor-bound protein 7##AK314368|GRB7|2886|growth factor receptor-bound protein 7	0.082536	
chr22	33322766	33322879	reg1023693.p1	6.100	+	BC014277 TSC_hg19_v1_chr22_+_33197759	-125070	+	TSC_hg19_v1_chr22_+_33197690 AK311702 AK314871 AK298126 BC013086 U14394 AX801509 U02571 S78453 U67195	-125128	+	NM_000362	-126021	+	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	79904	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	131533	-	AJ007583 AB011181 NM_004737 NM_133642	993548	-	BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK314871|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK298126|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC013086|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U14394|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U02571|TIMP3|7078|TIMP metallopeptidase inhibitor 3##S78453|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U67195|TIMP3|7078|TIMP metallopeptidase inhibitor 3##NM_000362|TIMP3|7078|TIMP metallopeptidase inhibitor 3##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase	0.0	
chr2	99453782	99453962	reg1002050.p2	6.100	+	NM_012214 TSC_hg19_v1_chr2_-_99347596	-106259	-	TSC_hg19_v1_chr2_-_99347557 AK314024	-106376	-	AK304393 AK309852 NM_001160154	-173937	-	BC068277 NM_207362	98808	-	BC028366 NM_182911	304163	-	AK126402 AK314133 BC021264 NM_144706	304193	+	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK304393|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK309852|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##NM_001160154|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##BC068277|C2orf55|343990|chromosome 2 open reading frame 55##NM_207362|C2orf55|343990|chromosome 2 open reading frame 55##BC028366|TSGA10|80705|testis specific, 10##NM_182911|TSGA10|80705|testis specific, 10##AK314133|C2orf15|150590|chromosome 2 open reading frame 15##BC021264|C2orf15|150590|chromosome 2 open reading frame 15##NM_144706|C2orf15|150590|chromosome 2 open reading frame 15	0.0	
chr3	131757208	131757359	reg1024211.p1	6.100	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	-3443	-	TSC_hg19_v1_chr3_-_131221816 CR456720 CU678442 BC002345 X06323 BC003375 AK301377 AK296626 NM_007208	-535529	-	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	-656632	+	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	278955	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	279005	+	AB014578 BC151246 TSC_hg19_v1_chr3_+_132136540 AY779857 BC043583 NM_015268	379244	+	AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##CR456720|MRPL3|11222|mitochondrial ribosomal protein L3##X06323|MRPL3|11222|mitochondrial ribosomal protein L3##BC003375|MRPL3|11222|mitochondrial ribosomal protein L3##AK301377|MRPL3|11222|mitochondrial ribosomal protein L3##AK296626|MRPL3|11222|mitochondrial ribosomal protein L3##NM_007208|MRPL3|11222|mitochondrial ribosomal protein L3##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate##AB014578|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC151246|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AY779857|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC043583|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##NM_015268|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13	0.642852	CTCF.p2:-4:0.643
chr17	75084792	75084927	reg1021678.p2	6.099	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	-62	+	AB114297 NM_198955 BC144361	-216099	+	TSC_hg19_v1_chr17_+_74864556 AK057861 AB235153 BC041577 NM_001199172 NM_144677 BC062354	-220193	+	NM_001204410 FM995496 AF130050	409	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	52175	+	TSC_hg19_v1_chr17_+_75137104 AK290913 BC142979 BC136523 BC136525	52276	+	NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338##AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001204410|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995496|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AF130050|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AK290913|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC142979|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136523|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136525|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)	0.712519	CTCF.p2:-40:0.713
chr21	47188620	47188774	reg1024051.p2	6.099	+	TSC_hg19_v1_chr21_+_47063638 AK310131	-125068	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-226365	-	AK303168 NM_001205207	-234163	-	AF176329 NM_001130141 NM_020528 BC012061 AK310672	81191	+	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	212988	+	TSC_hg19_v1_chr21_+_47518062 NM_001849 NM_058174 NM_058175 BC065509	329353	+	AK310131|PCBP3|54039|poly(rC) binding protein 3##U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1##NM_001849|COL6A2|1292|collagen, type VI, alpha 2##NM_058174|COL6A2|1292|collagen, type VI, alpha 2##NM_058175|COL6A2|1292|collagen, type VI, alpha 2##BC065509|COL6A2|1292|collagen, type VI, alpha 2	0.836087	CTCF.p2:-2:0.780
chr3	50587659	50587759	reg1019879.p2	6.099	+	AJ251367 AJ251368 AB011130 BC152438 AB383908 NM_001005505 NM_001174051 NM_006030 AF040709 AF042792 AK310138 TSC_hg19_v1_chr3_-_50541066	-46749	-	TSC_hg19_v1_chr3_-_50396943 NM_007024 AK314166	-190771	-	BC017367 TSC_hg19_v1_chr3_-_50396920 BC011948	-190799	-	AK124438 AK311093 TSC_hg19_v1_chr3_-_50605192 BC034766 AK313128 AK308074 AK309486 AL833938 AK130227 NM_001171740 NM_001171743 NM_016210	17434	-	TSC_hg19_v1_chr3_+_50606919 BX537562 NM_016173 AK314023 AF172244 AK124369	19239	+	AF188706 NM_001171741	20730	-	AJ251367|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AJ251368|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AB011130|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##BC152438|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_001005505|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_001174051|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_006030|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AF040709|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AF042792|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AK310138|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_007024|TMEM115|11070|transmembrane protein 115##AK314166|TMEM115|11070|transmembrane protein 115##BC017367|TMEM115|11070|transmembrane protein 115##BC011948|TMEM115|11070|transmembrane protein 115##AK124438|C3orf18|51161|chromosome 3 open reading frame 18##AK311093|C3orf18|51161|chromosome 3 open reading frame 18##BC034766|C3orf18|51161|chromosome 3 open reading frame 18##AK313128|C3orf18|51161|chromosome 3 open reading frame 18##AK308074|C3orf18|51161|chromosome 3 open reading frame 18##AK309486|C3orf18|51161|chromosome 3 open reading frame 18##AL833938|C3orf18|51161|chromosome 3 open reading frame 18##AK130227|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171740|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171743|C3orf18|51161|chromosome 3 open reading frame 18##NM_016210|C3orf18|51161|chromosome 3 open reading frame 18##BX537562|HEMK1|51409|HemK methyltransferase family member 1##NM_016173|HEMK1|51409|HemK methyltransferase family member 1##AK314023|HEMK1|51409|HemK methyltransferase family member 1##AF172244|HEMK1|51409|HemK methyltransferase family member 1##AK124369|HEMK1|51409|HemK methyltransferase family member 1##AF188706|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171741|C3orf18|51161|chromosome 3 open reading frame 18	0.996924	CTCF.p2:11:0.997
chr1	24397452	24397585	reg1023596.p1	6.098	+	TSC_hg19_v1_chr1_-_24306850 AK222994 AK296175 BC001107 NM_001191005 NM_001191006 NM_001191007 NM_001191009 NM_006625 NM_054016	-90626	-	TSC_hg19_v1_chr1_-_24306818 AF449427 CU674556 AB528881 AY150180 AY150181 AF047448 AF067730 AY007101 BC010074 BC005039 AK001286 AK001656 BC071575 AF419331	-90735	-	TSC_hg19_v1_chr1_+_24286317 AF151042 AK300522 BC068475 AK311305 BC001959 BC085018 BC078177 AF374386	-111172	+	TSC_hg19_v1_chr1_-_24434930 AK125972 BX537911	37451	-	BX647453 BX647644 BX647455 NM_152372 BC067101	41131	-	AB590595 CU688622 AF286095 TSC_hg19_v1_chr1_-_24469610 AK226001 BC029273 BC014096 AK308522 AK292204 AK313971 NM_021258	72154	-	AK222994|SRSF10|10772|serine/arginine-rich splicing factor 10##AK296175|SRSF10|10772|serine/arginine-rich splicing factor 10##BC001107|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_001191005|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_001191006|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_001191007|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_001191009|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_006625|SRSF10|10772|serine/arginine-rich splicing factor 10##NM_054016|SRSF10|10772|serine/arginine-rich splicing factor 10##AF449427|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150180|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150181|SRSF10|10772|serine/arginine-rich splicing factor 10##AF047448|SRSF10|10772|serine/arginine-rich splicing factor 10##AF067730|SRSF10|10772|serine/arginine-rich splicing factor 10##AY007101|SRSF10|10772|serine/arginine-rich splicing factor 10##BC010074|SRSF10|10772|serine/arginine-rich splicing factor 10##BC005039|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001286|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001656|SRSF10|10772|serine/arginine-rich splicing factor 10##BC071575|SRSF10|10772|serine/arginine-rich splicing factor 10##AF419331|SRSF10|10772|serine/arginine-rich splicing factor 10##AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AK125972|MYOM3|127294|myomesin family, member 3##BX537911|MYOM3|127294|myomesin family, member 3##BX647453|MYOM3|127294|myomesin family, member 3##BX647644|MYOM3|127294|myomesin family, member 3##BX647455|MYOM3|127294|myomesin family, member 3##NM_152372|MYOM3|127294|myomesin family, member 3##BC067101|MYOM3|127294|myomesin family, member 3##AF286095|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK226001|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC029273|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC014096|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK308522|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK292204|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK313971|IL22RA1|58985|interleukin 22 receptor, alpha 1##NM_021258|IL22RA1|58985|interleukin 22 receptor, alpha 1	0.999096	CTCF.p2:-4:0.999
chr14	64761342	64761523	reg1000436.p2	6.098	+	AF051427 AF051428 AF060555 NM_001040275 NM_001437	-330	-	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	-11769	-	NM_182910	-78761	+	NM_001040276 BX247957 TSC_hg19_v1_chr14_-_64805347	43926	-	AK302747 NM_005956	93321	+	TSC_hg19_v1_chr14_+_64855070 AK095514 AK312361 BC050420 AK309266 BC009806 J04031 AB384767 DQ893634 DQ896853	93664	+	AF051427|ESR2|2100|estrogen receptor 2 (ER beta)##AF051428|ESR2|2100|estrogen receptor 2 (ER beta)##AF060555|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001040275|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001437|ESR2|2100|estrogen receptor 2 (ER beta)##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_001040276|ESR2|2100|estrogen receptor 2 (ER beta)##BX247957|ESR2|2100|estrogen receptor 2 (ER beta)##AK302747|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_005956|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK312361|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC050420|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK309266|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC009806|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##J04031|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ893634|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ896853|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase	0.0	
chr8	22774949	22775066	reg1023409.p1	6.098	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-224223	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-224502	-	AK294968 AK295834 NM_001199881	-224933	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	10317	-	AK092617 BC034917 NM_001160036	69916	+	NM_001160037	78353	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.984721	CTCF.p2:-2:0.985
chr12	108457091	108457236	reg1026397.p1	6.097	+	AY238895 NM_203436	-289002	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-302162	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	-302253	-	BC110330 AB018332 NM_014653	66324	+	NM_001142345	257275	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	275921	-	AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1	0.030683	
chr1	237288301	237288434	reg1023051.p1	6.097	+	NM_001035 X98330 Y08218	-82594	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-329532	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	-329790	+	AK314151 NM_021186	765854	-	TSC_hg19_v1_chr1_+_239550016 AK056349	2261575	+	AF279779 NM_000740	2504005	+	NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3	0.931199	CTCF.p2:-5:0.931
chr4	165870745	165870860	reg1019281.p1	6.097	+	AK289711 NM_001166373	-566396	-	NM_012403	-751940	-	AB463878 AK000675 AK301408 NM_017923	-1336087	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	7300	+	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	7349	+	BC089393 NM_001012414	28015	-	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61	0.106558	
chr2	894148	894285	reg1022217.p1	6.096	+	TSC_hg19_v1_chr2_-_677406 BC016010 AL137269 NM_152834	-216805	-	BC033490 NM_001002919	-605972	-	TSC_hg19_v1_chr2_+_264946 NM_001040649 NM_004300 NM_007099 AK289934 M83653 BC020699 AK291861 BC007422 AB209838 BC106011 AB385551 BT007136 Y16846 M83654 M87546 S62885	-629304	+	TSC_hg19_v1_chr2_+_946534 BC035783 NM_018968 AJ003029 BC125251	52363	+	BC063107 NM_000547 NM_001206744 NM_001206745 NM_175719 BC095448 M17755 J02969 J02970 X17358 Y00406	523039	+	NM_175721 NM_175722 AF439430 CU687644	523963	+	BC016010|TMEM18|129787|transmembrane protein 18##AL137269|TMEM18|129787|transmembrane protein 18##NM_152834|TMEM18|129787|transmembrane protein 18##BC033490|FAM150B|285016|family with sequence similarity 150, member B##NM_001002919|FAM150B|285016|family with sequence similarity 150, member B##NM_001040649|ACP1|52|acid phosphatase 1, soluble##NM_004300|ACP1|52|acid phosphatase 1, soluble##NM_007099|ACP1|52|acid phosphatase 1, soluble##AK289934|ACP1|52|acid phosphatase 1, soluble##M83653|ACP1|52|acid phosphatase 1, soluble##BC020699|ACP1|52|acid phosphatase 1, soluble##AK291861|ACP1|52|acid phosphatase 1, soluble##BC007422|ACP1|52|acid phosphatase 1, soluble##AB209838|ACP1|52|acid phosphatase 1, soluble##BC106011|ACP1|52|acid phosphatase 1, soluble##BT007136|ACP1|52|acid phosphatase 1, soluble##Y16846|ACP1|52|acid phosphatase 1, soluble##M83654|ACP1|52|acid phosphatase 1, soluble##M87546|ACP1|52|acid phosphatase 1, soluble##S62885|ACP1|52|acid phosphatase 1, soluble##BC035783|SNTG2|54221|syntrophin, gamma 2##NM_018968|SNTG2|54221|syntrophin, gamma 2##AJ003029|SNTG2|54221|syntrophin, gamma 2##BC125251|SNTG2|54221|syntrophin, gamma 2##BC063107|TPO|7173|thyroid peroxidase##NM_000547|TPO|7173|thyroid peroxidase##NM_001206744|TPO|7173|thyroid peroxidase##NM_001206745|TPO|7173|thyroid peroxidase##NM_175719|TPO|7173|thyroid peroxidase##BC095448|TPO|7173|thyroid peroxidase##M17755|TPO|7173|thyroid peroxidase##J02969|TPO|7173|thyroid peroxidase##J02970|TPO|7173|thyroid peroxidase##X17358|TPO|7173|thyroid peroxidase##Y00406|TPO|7173|thyroid peroxidase##NM_175721|TPO|7173|thyroid peroxidase##NM_175722|TPO|7173|thyroid peroxidase##AF439430|TPO|7173|thyroid peroxidase	0.767845	CTCF.p2:29:0.768
chr4	167245627	167245736	reg1023627.p2	6.096	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-451227	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-945524	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-996826	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	909930	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	910023	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	910059	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.836849	CTCF.p2:1:0.837
chr5	58303405	58303543	reg1025660.p1	6.096	+	BC036319 NM_001197223	-7716	-	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	-424555	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	-516180	+	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	31904	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	268456	-	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	349269	-	BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.994572	CTCF.p2:11:0.995
chr6	10759726	10759852	reg1023103.p1	6.096	+	AK311340 TSC_hg19_v1_chr6_+_10748043 NM_001127711 NM_030969 AK294018 BC013913 AK291883 AK294152 BC007080 BC001033 BC071660	-11749	+	NM_001165258 NM_016462 TSC_hg19_v1_chr6_+_10723398 AF151028 BC010086 AK310191 AK309591 AF164962 BC002496 AK223462	-36491	+	TSC_hg19_v1_chr6_+_10695204 BC010907 NM_017906 AB527917 DQ892798 DQ896045	-64603	+	AK314408 AB593146 AK097831 AK310329 TSC_hg19_v1_chr6_-_10838761 BC033002 NM_001242385 NM_001242957 NM_005906	78960	-	AF091149 BC069603 AF079550 BC117316 BC117318 NM_004752	122290	-	AK128130 NM_001040274	127274	+	AK311340|TMEM14B|81853|transmembrane protein 14B##NM_001127711|TMEM14B|81853|transmembrane protein 14B##NM_030969|TMEM14B|81853|transmembrane protein 14B##BC013913|TMEM14B|81853|transmembrane protein 14B##AK291883|TMEM14B|81853|transmembrane protein 14B##AK294152|TMEM14B|81853|transmembrane protein 14B##BC007080|TMEM14B|81853|transmembrane protein 14B##BC001033|TMEM14B|81853|transmembrane protein 14B##BC071660|TMEM14B|81853|transmembrane protein 14B##NM_001165258|TMEM14C|51522|transmembrane protein 14C##NM_016462|TMEM14C|51522|transmembrane protein 14C##AF151028|TMEM14C|51522|transmembrane protein 14C##BC010086|TMEM14C|51522|transmembrane protein 14C##AK310191|TMEM14C|51522|transmembrane protein 14C##AK309591|TMEM14C|51522|transmembrane protein 14C##AF164962|TMEM14C|51522|transmembrane protein 14C##BC002496|TMEM14C|51522|transmembrane protein 14C##AK223462|TMEM14C|51522|transmembrane protein 14C##BC010907|PAK1IP1|55003|PAK1 interacting protein 1##NM_017906|PAK1IP1|55003|PAK1 interacting protein 1##DQ892798|PAK1IP1|55003|PAK1 interacting protein 1##DQ896045|PAK1IP1|55003|PAK1 interacting protein 1##AK314408|MAK|4117|male germ cell-associated kinase##AB593146|MAK|4117|male germ cell-associated kinase##AK097831|MAK|4117|male germ cell-associated kinase##AK310329|MAK|4117|male germ cell-associated kinase##BC033002|MAK|4117|male germ cell-associated kinase##NM_001242385|MAK|4117|male germ cell-associated kinase##NM_001242957|MAK|4117|male germ cell-associated kinase##NM_005906|MAK|4117|male germ cell-associated kinase##AF091149|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC069603|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AF079550|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117316|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117318|GCM2|9247|glial cells missing homolog 2 (Drosophila)##NM_004752|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AK128130|SYCP2L|221711|synaptonemal complex protein 2-like##NM_001040274|SYCP2L|221711|synaptonemal complex protein 2-like	0.0	
chr8	57470535	57470694	reg1025085.p1	6.096	+	BC107706 TSC_hg19_v1_chr8_-_57359201 AK309758 AK314908 NM_001135690	-111385	-	CR541808 CR541828 DQ890865 DQ890871 DQ894027 BC032505 NM_006211	-112063	-	TSC_hg19_v1_chr8_+_57358383 AK091563 AX747062	-112242	+	AY032885 TSC_hg19_v1_chr8_-_57906227	435642	-	TSC_hg19_v1_chr8_-_57906381 BC017797	435764	-	BC067814 TSC_hg19_v1_chr8_-_57906402	435788	-	BC107706|PENK|5179|proenkephalin##AK314908|PENK|5179|proenkephalin##NM_001135690|PENK|5179|proenkephalin##CR541808|PENK|5179|proenkephalin##CR541828|PENK|5179|proenkephalin##DQ890865|PENK|5179|proenkephalin##DQ890871|PENK|5179|proenkephalin##DQ894027|PENK|5179|proenkephalin##BC032505|PENK|5179|proenkephalin##NM_006211|PENK|5179|proenkephalin##AY032885|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1	0.98506	CTCF.p2:6:0.985
chr1	102459393	102459475	reg1025414.p2	6.095	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-756864	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-757053	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-968001	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	3053	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	3356	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1037349	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.418366	CTCF.p2:16:0.418
chr16	2203656	2203749	reg1021582.p2	6.095	+	TSC_hg19_v1_chr16_+_2198707 BC007681	-4957	+	TSC_hg19_v1_chr16_+_2198609 AY646153 BC066913 NM_014353	-5074	+	U24497 TSC_hg19_v1_chr16_-_2185898 L33243 NM_000296 NM_001009944	-17803	-	TSC_hg19_v1_chr16_+_2205783 AK090624 AX746540 NM_032271	2079	+	TSC_hg19_v1_chr16_+_2205810 AY569455	2125	+	NM_020764 AF451977	42791	-	BC007681|RAB26|25837|RAB26, member RAS oncogene family##AY646153|RAB26|25837|RAB26, member RAS oncogene family##BC066913|RAB26|25837|RAB26, member RAS oncogene family##NM_014353|RAB26|25837|RAB26, member RAS oncogene family##U24497|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##L33243|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##NM_000296|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##NM_001009944|PKD1|5310|polycystic kidney disease 1 (autosomal dominant)##AK090624|TRAF7|84231|TNF receptor-associated factor 7##NM_032271|TRAF7|84231|TNF receptor-associated factor 7##AY569455|TRAF7|84231|TNF receptor-associated factor 7##NM_020764|CASKIN1|57524|CASK interacting protein 1##AF451977|CASKIN1|57524|CASK interacting protein 1	0.992198	CTCF.p2:3:0.992
chr5	169233081	169233241	reg1011085.p4	6.095	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-168861	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-168917	+	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	-222440	+	AK055998 NM_001129891	174582	-	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	299810	+	BC030767 NM_001102609 BC092511	426835	+	D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58	0.0	
chr1	160963483	160963625	reg1023269.p1	6.094	+	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	-38995	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	-108596	-	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	-130976	-	BT020103 CR533512 DQ892228 DQ895428 EU831648 EU831732 AB528601 AF207907 AK304412 TSC_hg19_v1_chr1_-_160990931 BC001533 AY358896 AK026665 AF154005 AK075152 AL136649	27344	-	TSC_hg19_v1_chr1_-_160990981 NM_016946	27497	-	AF191495 TSC_hg19_v1_chr1_-_161008713 BC001699 BC038219	45160	-	HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BT020103|F11R|50848|F11 receptor##CR533512|F11R|50848|F11 receptor##DQ892228|F11R|50848|F11 receptor##DQ895428|F11R|50848|F11 receptor##EU831648|F11R|50848|F11 receptor##EU831732|F11R|50848|F11 receptor##AF207907|F11R|50848|F11 receptor##AK304412|F11R|50848|F11 receptor##BC001533|F11R|50848|F11 receptor##AY358896|F11R|50848|F11 receptor##AK026665|F11R|50848|F11 receptor##AF154005|F11R|50848|F11 receptor##AK075152|F11R|50848|F11 receptor##AL136649|F11R|50848|F11 receptor##NM_016946|F11R|50848|F11 receptor##BC001699|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##BC038219|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1	0.977907	CTCF.p2:-1:0.978
chr12	132703660	132703764	reg1022579.p1	6.094	+	AF458594 NM_021808	-13140	-	TSC_hg19_v1_chr12_+_132629014 BC071958 CU687200 DQ892518 DQ895730 BC007893	-74656	+	TSC_hg19_v1_chr12_+_132629011 AK074489	-74702	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	202145	-	NM_001142641	363444	+	NM_001195520	483324	-	AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC071958|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ892518|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ895730|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC007893|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001142641|FBRSL1|57666|fibrosin-like 1##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055	0.398671	CTCF.p2:-5:0.399
chr17	16440289	16440414	reg1021787.p1	6.094	+	NM_001113567 NM_207387 TSC_hg19_v1_chr17_-_16395510	-44844	-	TSC_hg19_v1_chr17_-_16395091 AK093015 AX747857 BC144381	-45198	-	TSC_hg19_v1_chr17_+_16342350 AK098643 AK307982 AK308482 AK309961 BX538291 AK311247 BC027986 BC040159	-97991	+	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	32145	-	AK131401 NM_020787	116810	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	153253	+	NM_001113567|FAM211A|388341|family with sequence similarity 211, member A##NM_207387|FAM211A|388341|family with sequence similarity 211, member A##AK093015|FAM211A|388341|family with sequence similarity 211, member A##BC144381|FAM211A|388341|family with sequence similarity 211, member A##AK098643|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK307982|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK308482|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK309961|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##BX538291|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AK311247|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##BC027986|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##BC040159|C17orf76-AS1|125144|C17orf76 antisense RNA 1 (non-protein coding)##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A	0.0	
chr17	66770494	66770645	reg1020980.p1	6.094	+	AK056789 BC136686 BC136689 AY358197 NM_001243746 NM_017565 TSC_hg19_v1_chr17_-_66597112	-173546	-	AK298071 TSC_hg19_v1_chr17_-_66596742	-173830	-	TSC_hg19_v1_chr17_+_66508570 BC036285 S54705 AK124586 AK312307 CR749311 M18468 M33336	-261970	+	BC130280 BC143971 BC143972 AK304286 BC010392 AB020629 BC047765 BC094689 AK304360 AK295876 BC037309 BC024003 NM_007168	180887	-	BC062472 AK057068 AY028899 NM_080283	286521	-	BC125231 BC125232 AY028898 NM_080284 TSC_hg19_v1_chr17_-_67138037 BC070125 AK308431 BC029852	367506	-	AK056789|FAM20A|54757|family with sequence similarity 20, member A##BC136686|FAM20A|54757|family with sequence similarity 20, member A##BC136689|FAM20A|54757|family with sequence similarity 20, member A##AY358197|FAM20A|54757|family with sequence similarity 20, member A##NM_001243746|FAM20A|54757|family with sequence similarity 20, member A##NM_017565|FAM20A|54757|family with sequence similarity 20, member A##AK298071|FAM20A|54757|family with sequence similarity 20, member A##BC036285|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##S54705|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK124586|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK312307|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##CR749311|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M18468|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M33336|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	0.979625	CTCF.p2:-3:0.980
chr17	6797631	6797724	reg1023204.p2	6.094	+	AF357879 AK292818 AK304345 BC014599 NM_053285	-62644	-	NM_153230 BC034782	-118116	+	BC073156 TSC_hg19_v1_chr17_+_6659364 AK292710 AK292848 BC032776 BC058017 EF028165 EF028166 X99699	-138299	+	M62982 NM_000697 M35418 M58704 BC069557 AB590844	101730	+	NM_001004333	118058	+	AK289930 TSC_hg19_v1_chr17_+_6915955 BC036317 BC051802 BC062705 BC095436 AM746459	118283	+	AF357879|TEKT1|83659|tektin 1##AK292818|TEKT1|83659|tektin 1##AK304345|TEKT1|83659|tektin 1##BC014599|TEKT1|83659|tektin 1##NM_053285|TEKT1|83659|tektin 1##NM_153230|FBXO39|162517|F-box protein 39##BC034782|FBXO39|162517|F-box protein 39##BC073156|XAF1|54739|XIAP associated factor 1##AK292710|XAF1|54739|XIAP associated factor 1##AK292848|XAF1|54739|XIAP associated factor 1##BC032776|XAF1|54739|XIAP associated factor 1##BC058017|XAF1|54739|XIAP associated factor 1##EF028165|XAF1|54739|XIAP associated factor 1##EF028166|XAF1|54739|XIAP associated factor 1##X99699|XAF1|54739|XIAP associated factor 1##M62982|ALOX12|239|arachidonate 12-lipoxygenase##NM_000697|ALOX12|239|arachidonate 12-lipoxygenase##M35418|ALOX12|239|arachidonate 12-lipoxygenase##M58704|ALOX12|239|arachidonate 12-lipoxygenase##BC069557|ALOX12|239|arachidonate 12-lipoxygenase##NM_001004333|RNASEK|440400|ribonuclease, RNase K##AK289930|RNASEK|440400|ribonuclease, RNase K##BC036317|RNASEK|440400|ribonuclease, RNase K##BC051802|RNASEK|440400|ribonuclease, RNase K##BC062705|RNASEK|440400|ribonuclease, RNase K##BC095436|RNASEK|440400|ribonuclease, RNase K##AM746459|RNASEK|440400|ribonuclease, RNase K	0.143875	
chr2	39351611	39351759	reg1025954.p1	6.094	+	TSC_hg19_v1_chr2_-_39348166 AK290228	-3526	-	L13857 AB463274 NM_005633	-4103	-	TSC_hg19_v1_chr2_-_39187477 BC030087	-164205	-	AY845084 AY847283 NM_001009565 BC144460	105019	-	EU832785 GQ129258 AB384884 NM_003618 TSC_hg19_v1_chr2_-_39664286 AK314487	312524	-	TSC_hg19_v1_chr2_-_39664294 BC060880	312616	-	AK290228|SOS1|6654|son of sevenless homolog 1 (Drosophila)##L13857|SOS1|6654|son of sevenless homolog 1 (Drosophila)##NM_005633|SOS1|6654|son of sevenless homolog 1 (Drosophila)##BC030087|LOC375196|375196|uncharacterized LOC375196##AY845084|CDKL4|344387|cyclin-dependent kinase-like 4##AY847283|CDKL4|344387|cyclin-dependent kinase-like 4##NM_001009565|CDKL4|344387|cyclin-dependent kinase-like 4##BC144460|CDKL4|344387|cyclin-dependent kinase-like 4##EU832785|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##GQ129258|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##NM_003618|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##AK314487|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3##BC060880|MAP4K3|8491|mitogen-activated protein kinase kinase kinase kinase 3	0.92999	CTCF.p2:-5:0.930
chr8	89911135	89911253	reg1024794.p2	6.094	+	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	-571448	-	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	-1024935	-	AK093121 AX747937 BC117326 BC117328 NM_173538	-2032521	+	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	858836	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	859090	+	AF061326 NM_004337	1002901	+	AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF061326|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_004337|OSGIN2|734|oxidative stress induced growth inhibitor family member 2	0.046831	
chr10	126429735	126429915	reg1002111.p1	6.093	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-279404	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-291248	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-322307	-	D50930 TSC_hg19_v1_chr10_-_126432660	2819	-	TSC_hg19_v1_chr10_-_126432823 BC031654	2991	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	3086	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.0	
chr11	94884269	94884429	reg1002072.p1	6.093	+	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-61337	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-83941	+	TSC_hg19_v1_chr11_+_94800329 BC057783 BC006181	-84005	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	79955	-	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	638302	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	638384	-	AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8##BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B	0.645657	CTCF.p2:-9:0.646
chr13	42928601	42928742	reg1024341.p1	6.093	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	-82386	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	-216461	+	NM_152910 NM_178009 AB078967 AB078968	-305806	+	BC040889 NM_033012	208200	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	219663	+	NM_182508 AK310859 AK098238 BC093659 BC112237	427053	+	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30	0.0	
chr4	7846115	7846212	reg1020090.p2	6.093	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	-409507	-	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-651768	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-776362	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	95225	-	TSC_hg19_v1_chr4_-_8073714 AK094798	227553	-	TSC_hg19_v1_chr4_-_8129388 AK301060	283222	-	BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2	0.014605	
chr5	125570412	125570510	reg1024330.p1	6.093	+	BC131507 AB033107 BC151226 NM_020747	-1489673	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-2722579	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-2811317	-	NM_001146319 AK316288 AK300154	125353	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	188382	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	188726	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.0	
chr5	40879614	40879762	reg1020866.p2	6.093	+	AF356193 AY196783 NM_032587 TSC_hg19_v1_chr5_+_40841464 BC093825 AK304349 AB209844	-38246	+	TSC_hg19_v1_chr5_-_40835325 AK311827 NM_000997	-44333	-	TSC_hg19_v1_chr5_-_40835315 BC079477 D23661 AB055770 AK124098 BC067790 BX647123	-44385	-	TSC_hg19_v1_chr5_+_40909520 BC025402	29817	+	TSC_hg19_v1_chr5_+_40909599 AK290349 Y11720 NM_000587 BC065305 BC041807	29894	+	BC063851 TSC_hg19_v1_chr5_+_40909639 AK304848 AK312737	29957	+	AF356193|CARD6|84674|caspase recruitment domain family, member 6##AY196783|CARD6|84674|caspase recruitment domain family, member 6##NM_032587|CARD6|84674|caspase recruitment domain family, member 6##BC093825|CARD6|84674|caspase recruitment domain family, member 6##AK304349|CARD6|84674|caspase recruitment domain family, member 6##AB209844|CARD6|84674|caspase recruitment domain family, member 6##AK311827|RPL37|6167|ribosomal protein L37##NM_000997|RPL37|6167|ribosomal protein L37##BC079477|RPL37|6167|ribosomal protein L37##D23661|RPL37|6167|ribosomal protein L37##AB055770|RPL37|6167|ribosomal protein L37##AK124098|SNORD72|619564|small nucleolar RNA, C/D box 72##BC067790|RPL37|6167|ribosomal protein L37##BX647123|RPL37|6167|ribosomal protein L37##BC025402|C7|730|complement component 7##AK290349|C7|730|complement component 7##Y11720|C7|730|complement component 7##NM_000587|C7|730|complement component 7##BC065305|C7|730|complement component 7##BC041807|C7|730|complement component 7##BC063851|C7|730|complement component 7##AK304848|C7|730|complement component 7##AK312737|C7|730|complement component 7	0.989193	CTCF.p2:1:0.989
chr6	46010253	46010397	reg1021085.p1	6.093	+	DQ892643 DQ895881 CU690236 AF176920 AK314416 AK075163 TSC_hg19_v1_chr6_-_45983598 AK075144 AF216941 AK222544 BC035968 DQ679794 AK223130 NM_016929	-26848	-	TSC_hg19_v1_chr6_+_45390379 L40992	-619913	+	TSC_hg19_v1_chr6_+_45390325 BC108919 BC108920	-620020	+	AY032602 AK097048 NM_001114086	37706	-	NM_014936 TSC_hg19_v1_chr6_+_46097726 BC018054	87389	+	TSC_hg19_v1_chr6_+_46097818 AK291276 AB020686	87539	+	DQ892643|CLIC5|53405|chloride intracellular channel 5##DQ895881|CLIC5|53405|chloride intracellular channel 5##AF176920|CLIC5|53405|chloride intracellular channel 5##AK314416|CLIC5|53405|chloride intracellular channel 5##AK075163|CLIC5|53405|chloride intracellular channel 5##AK075144|CLIC5|53405|chloride intracellular channel 5##AF216941|CLIC5|53405|chloride intracellular channel 5##AK222544|CLIC5|53405|chloride intracellular channel 5##BC035968|CLIC5|53405|chloride intracellular channel 5##DQ679794|CLIC5|53405|chloride intracellular channel 5##AK223130|CLIC5|53405|chloride intracellular channel 5##NM_016929|CLIC5|53405|chloride intracellular channel 5##L40992|RUNX2|860|runt-related transcription factor 2##BC108919|RUNX2|860|runt-related transcription factor 2##BC108920|RUNX2|860|runt-related transcription factor 2##AY032602|CLIC5|53405|chloride intracellular channel 5##AK097048|CLIC5|53405|chloride intracellular channel 5##NM_001114086|CLIC5|53405|chloride intracellular channel 5##NM_014936|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##BC018054|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##AK291276|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##AB020686|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)	0.0	
chr10	50727168	50727287	reg1021861.p2	6.092	+	NM_001080520	-127321	-	AK127811 NM_001135196 NM_199459 TSC_hg19_v1_chr10_+_50507214 AL833265	-220016	+	DQ884399 TSC_hg19_v1_chr10_-_50396437 BC047724 BC104438 BC104439 NM_001010863 BC037922 BC042857 AK303891	-330801	-	BC028954 AK074682 BC063690 NM_170753	5023	-	TSC_hg19_v1_chr10_-_50747072 BC127104 L04791	19830	-	TSC_hg19_v1_chr10_-_50747117 AK291018 NM_000124	19898	-	NM_001080520|DRGX|644168|dorsal root ganglia homeobox##AK127811|C10orf71|118461|chromosome 10 open reading frame 71##NM_001135196|C10orf71|118461|chromosome 10 open reading frame 71##NM_199459|C10orf71|118461|chromosome 10 open reading frame 71##AL833265|C10orf71|118461|chromosome 10 open reading frame 71##DQ884399|C10orf128|170371|chromosome 10 open reading frame 128##BC047724|C10orf128|170371|chromosome 10 open reading frame 128##BC104438|C10orf128|170371|chromosome 10 open reading frame 128##BC104439|C10orf128|170371|chromosome 10 open reading frame 128##NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128##BC037922|C10orf128|170371|chromosome 10 open reading frame 128##BC042857|C10orf128|170371|chromosome 10 open reading frame 128##BC028954|PGBD3|267004|piggyBac transposable element derived 3##AK074682|PGBD3|267004|piggyBac transposable element derived 3##BC063690|PGBD3|267004|piggyBac transposable element derived 3##NM_170753|PGBD3|267004|piggyBac transposable element derived 3##BC127104|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6##L04791|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6##AK291018|PGBD3|267004|piggyBac transposable element derived 3##NM_000124|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6	0.793254	CTCF.p2:3:0.793
chr11	45124520	45124691	reg1001947.p1	6.091	+	AF275818 NM_020229	-9042	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	-152188	-	TSC_hg19_v1_chr11_-_44956087 AF010315	-168498	-	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	183145	-	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	562579	-	NM_001145265 NM_001145266	701017	+	AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1	0.020376	
chr12	53259269	53259353	reg1021793.p2	6.091	+	AB463817 AX721217 AK298636 AK096419 AK290901 NM_173352	-16565	-	AJ564105 BC063648 NM_175834 BC039148	-31242	-	CU692074 EU832356 EU832441 BC042174 X67683 BC012867 AK098110 AK296582 AK299394 AK299400 AK299451 AK307941 NM_002272	-51440	-	CU687300 AB528612 AM392826 AM392892 DQ892637 DQ895875 U76549 M34225 M26512 BC075839 BC073760 X74929 BC000654 Z36777 BC063513 TSC_hg19_v1_chr12_-_53298839 AK222941 D28446 NM_002273	39505	-	NM_199187 AK308506	83350	+	NM_000224 TSC_hg19_v1_chr12_+_53342874	83550	+	AK298636|KRT78|196374|keratin 78##AK096419|KRT78|196374|keratin 78##AK290901|KRT78|196374|keratin 78##NM_173352|KRT78|196374|keratin 78##AJ564105|KRT79|338785|keratin 79##BC063648|KRT79|338785|keratin 79##NM_175834|KRT79|338785|keratin 79##BC039148|KRT79|338785|keratin 79##EU832356|KRT4|3851|keratin 4##EU832441|KRT4|3851|keratin 4##BC042174|KRT4|3851|keratin 4##X67683|KRT4|3851|keratin 4##BC012867|KRT4|3851|keratin 4##AK098110|KRT4|3851|keratin 4##AK296582|KRT4|3851|keratin 4##AK299394|KRT4|3851|keratin 4##AK299400|KRT4|3851|keratin 4##AK299451|KRT4|3851|keratin 4##AK307941|KRT4|3851|keratin 4##NM_002272|KRT4|3851|keratin 4##AM392826|KRT8|3856|keratin 8##AM392892|KRT8|3856|keratin 8##DQ892637|KRT8|3856|keratin 8##DQ895875|KRT8|3856|keratin 8##U76549|KRT8|3856|keratin 8##M34225|KRT8|3856|keratin 8##M26512|KRT8|3856|keratin 8##BC075839|KRT8|3856|keratin 8##BC073760|KRT8|3856|keratin 8##X74929|KRT8|3856|keratin 8##BC000654|KRT8|3856|keratin 8##Z36777|KRT8|3856|keratin 8##BC063513|KRT8|3856|keratin 8##AK222941|KRT8|3856|keratin 8##NM_002273|KRT8|3856|keratin 8##NM_199187|KRT18|3875|keratin 18##AK308506|KRT18|3875|keratin 18##NM_000224|KRT18|3875|keratin 18	0.390779	CTCF.p2:-10:0.391
chr12	9531295	9531400	reg1022457.p2	6.091	+	TSC_hg19_v1_chr12_+_9436619 AK123583 AK309820	-94722	+	BC111756 AK313639 NM_002864 X54380	-170385	-	TSC_hg19_v1_chr12_-_9268536 NM_000014	-262789	-	TSC_hg19_v1_chr12_-_9600810 BC035635 BC128040 BC111733	69451	-	BC027885 BC113997 BC114516 U11276 NM_002258 AK292022	229149	-	TSC_hg19_v1_chr12_+_9800760 AK096274	269549	+	AK309820|LOC642846|642846|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like##BC111756|PZP|5858|pregnancy-zone protein##AK313639|PZP|5858|pregnancy-zone protein##NM_002864|PZP|5858|pregnancy-zone protein##X54380|PZP|5858|pregnancy-zone protein##NM_000014|A2M|2|alpha-2-macroglobulin##BC035635|DDX12P|440081|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12, pseudogene##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK096274|LOC374443|374443|CLR pseudogene	0.912606	CTCF.p2:-5:0.913
chr17	59426833	59426960	reg1023573.p1	6.091	+	TSC_hg19_v1_chr17_+_58755255 NM_001099432 NM_017679 AK304791 AK225757 BC017390 AK314744 AF361219 BC117275 BC143386 BC143387 AK025510	-671683	+	TSC_hg19_v1_chr17_+_58677710 BC016480 BC042418 BC032826 BC033893 DQ891047 EU176552 BT009780	-749207	+	TSC_hg19_v1_chr17_+_58677553 BC060877 NM_003620 AK312902 AK299773 U78305	-749352	+	TSC_hg19_v1_chr17_+_59477203 BC052566 NM_005994 AK127429 BC070054	50340	+	TSC_hg19_v1_chr17_+_59477477 U28049	50600	+	TSC_hg19_v1_chr17_+_59477713 AL832900 AB209378	50821	+	NM_001099432|BCAS3|54828|breast carcinoma amplified sequence 3##NM_017679|BCAS3|54828|breast carcinoma amplified sequence 3##AK304791|BCAS3|54828|breast carcinoma amplified sequence 3##AK225757|BCAS3|54828|breast carcinoma amplified sequence 3##BC017390|BCAS3|54828|breast carcinoma amplified sequence 3##AK314744|BCAS3|54828|breast carcinoma amplified sequence 3##AF361219|BCAS3|54828|breast carcinoma amplified sequence 3##BC117275|BCAS3|54828|breast carcinoma amplified sequence 3##BC143386|BCAS3|54828|breast carcinoma amplified sequence 3##BC143387|BCAS3|54828|breast carcinoma amplified sequence 3##AK025510|BCAS3|54828|breast carcinoma amplified sequence 3##BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC052566|TBX2|6909|T-box 2##NM_005994|TBX2|6909|T-box 2##BC070054|TBX2|6909|T-box 2##U28049|TBX2|6909|T-box 2##AL832900|TBX2|6909|T-box 2##AB209378|TBX2|6909|T-box 2	0.992377	CTCF.p2:16:0.992
chr2	111336149	111336262	reg1024013.p1	6.091	+	NM_005054 U64675	-1528	-	BC094740 NM_001205288 NM_033514	-105554	-	TSC_hg19_v1_chr2_-_110970123 BC031315	-366084	-	AL136868 NM_001037866 NM_001123363 NM_032260	103	-	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	99438	-	TSC_hg19_v1_chr2_+_111435820 BC040607	99617	+	NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##BC031315|LINC00116|205251|long intergenic non-protein coding RNA 116##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)	0.58281	CTCF.p2:-10:0.583
chr1	183439316	183439484	reg1024125.p1	6.090	+	AB007948 TSC_hg19_v1_chr1_-_183387507 AK291390 NM_015039 AF288395	-51782	-	AB383893 TSC_hg19_v1_chr1_-_183387486	-51951	-	BC020998 NM_170706	-165392	-	AL050020 TSC_hg19_v1_chr1_-_183441513	2058	-	TSC_hg19_v1_chr1_+_183441464 NM_001174061 NM_173156 NM_201568 NM_201569	2090	+	AK297207 TSC_hg19_v1_chr1_+_183441641 AK299178 AK056035 AK091477 AX747010 BC036381 AK307394 AK074297	2230	+	AB007948|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AK291390|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##NM_015039|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AF288395|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##BC020998|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##NM_170706|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AL050020|DKFZP564C196|284649|uncharacterized LOC284649##NM_001174061|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_173156|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_201568|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_201569|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK297207|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK299178|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK056035|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK091477|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC036381|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK307394|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK074297|SMG7|9887|smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.115868	
chr20	39597675	39597807	reg1000214.p2	6.090	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-279864	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-2006752	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-2042673	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	59753	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	59923	+	TSC_hg19_v1_chr20_+_39765861 AB210028	168121	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.0	
chr4	176174754	176174894	reg1026557.p1	6.090	+	NM_001130703 NM_001130704 NM_001130705 NM_014269 AK292410 BC036070	-335291	+	U93917 BC036086 NM_001042543 NM_006529	-424404	-	AK300524 NM_000860 NM_001145816	-731033	-	CU692222 CU692662 DQ892372 DQ895581 TSC_hg19_v1_chr4_-_176733403	558569	-	BC010461 BC022508 TSC_hg19_v1_chr4_-_176733419 D49958	558617	-	BC044612 BC053954 TSC_hg19_v1_chr4_-_176733905	559082	-	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29##NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29##AK292410|ADAM29|11086|ADAM metallopeptidase domain 29##BC036070|ADAM29|11086|ADAM metallopeptidase domain 29##U93917|GLRA3|8001|glycine receptor, alpha 3##BC036086|GLRA3|8001|glycine receptor, alpha 3##NM_001042543|GLRA3|8001|glycine receptor, alpha 3##NM_006529|GLRA3|8001|glycine receptor, alpha 3##AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##DQ892372|GPM6A|2823|glycoprotein M6A##DQ895581|GPM6A|2823|glycoprotein M6A##BC010461|GPM6A|2823|glycoprotein M6A##BC022508|GPM6A|2823|glycoprotein M6A##D49958|GPM6A|2823|glycoprotein M6A##BC044612|GPM6A|2823|glycoprotein M6A##BC053954|GPM6A|2823|glycoprotein M6A	0.639266	CTCF.p2:11:0.639
chr9	37000080	37000210	reg1023566.p2	6.090	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-427221	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-598970	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-599248	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	34271	-	TSC_hg19_v1_chr9_+_37079908 AK091718	79761	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	79863	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.253273	CTCF.p2:32:0.253
chr17	79490355	79490462	reg1023182.p2	6.089	+	TSC_hg19_v1_chr17_-_79479865 NM_001199954 NM_001614	-10543	-	BC001920 BC015779 BC053572 BC015005 BC009848 BC010999 BC007442 BC012050 BC018774 BC015695 BC000292 AK304637 TSC_hg19_v1_chr17_-_79479829 AK291937 AK301175 X04098	-10603	-	BC023548 TSC_hg19_v1_chr17_-_79478994 BC039144	-11430	-	NM_001077182 NM_012418 AF030165 BC126295 BC130330 HQ258429	5078	+	AL834374 TSC_hg19_v1_chr17_-_79514725	24286	-	TSC_hg19_v1_chr17_-_79519415 AK024644 BC008883 DQ989324 NM_025161	28991	-	NM_001199954|ACTG1|71|actin, gamma 1##NM_001614|ACTG1|71|actin, gamma 1##BC001920|ACTG1|71|actin, gamma 1##BC015779|ACTG1|71|actin, gamma 1##BC053572|ACTG1|71|actin, gamma 1##BC015005|ACTG1|71|actin, gamma 1##BC009848|ACTG1|71|actin, gamma 1##BC010999|ACTG1|71|actin, gamma 1##BC007442|ACTG1|71|actin, gamma 1##BC012050|ACTG1|71|actin, gamma 1##BC018774|ACTG1|71|actin, gamma 1##BC015695|ACTG1|71|actin, gamma 1##BC000292|ACTG1|71|actin, gamma 1##AK304637|ACTG1|71|actin, gamma 1##AK291937|ACTG1|71|actin, gamma 1##AK301175|ACTG1|71|actin, gamma 1##X04098|ACTG1|71|actin, gamma 1##BC023548|ACTG1|71|actin, gamma 1##BC039144|ACTG1|71|actin, gamma 1##NM_001077182|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##NM_012418|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##AF030165|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC126295|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC130330|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##HQ258429|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##AL834374|C17orf70|80233|chromosome 17 open reading frame 70##AK024644|C17orf70|80233|chromosome 17 open reading frame 70##BC008883|C17orf70|80233|chromosome 17 open reading frame 70##DQ989324|C17orf70|80233|chromosome 17 open reading frame 70##NM_025161|C17orf70|80233|chromosome 17 open reading frame 70	0.0	
chr20	3994733	3994829	reg1020542.p1	6.089	+	NM_153640 BC107724 BC065019	-124292	+	TSC_hg19_v1_chr20_+_3870042 AK310190 AK097796 BC142976 BC009421	-124725	+	TSC_hg19_v1_chr20_-_3869721 BC005095 BC012193	-125063	-	AL096778 NM_007219 BC039584 TSC_hg19_v1_chr20_-_3996221 BC000213 BC003141 NM_001134337 NM_001134338 BC032738	1384	-	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	134654	+	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	134742	+	NM_153640|PANK2|80025|pantothenate kinase 2##BC107724|PANK2|80025|pantothenate kinase 2##BC065019|PANK2|80025|pantothenate kinase 2##AK310190|PANK2|80025|pantothenate kinase 2##AK097796|PANK2|80025|pantothenate kinase 2##BC142976|PANK2|80025|pantothenate kinase 2##BC009421|PANK2|80025|pantothenate kinase 2##AL096778|RNF24|11237|ring finger protein 24##NM_007219|RNF24|11237|ring finger protein 24##BC039584|RNF24|11237|ring finger protein 24##BC000213|RNF24|11237|ring finger protein 24##NM_001134337|RNF24|11237|ring finger protein 24##NM_001134338|RNF24|11237|ring finger protein 24##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase	0.0	
chr10	28721193	28721334	reg1026203.p1	6.088	+	TSC_hg19_v1_chr10_-_28591994 AK315046 AK301592	-129331	-	BC038105 AK057360 NM_173496	-150223	-	AK292521 TSC_hg19_v1_chr10_-_28287879 AK001679 NM_018076 BC085611	-433379	-	BC043365 TSC_hg19_v1_chr10_-_28821677	100332	-	AK055852 TSC_hg19_v1_chr10_+_28821707 AK225846	100443	+	BC001026 TSC_hg19_v1_chr10_+_28821734	100466	+	AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK292521|ARMC4|55130|armadillo repeat containing 4##AK001679|ARMC4|55130|armadillo repeat containing 4##NM_018076|ARMC4|55130|armadillo repeat containing 4##BC085611|ARMC4|55130|armadillo repeat containing 4##BC043365|LOC220906|220906|uncharacterized LOC220906##AK055852|WAC|51322|WW domain containing adaptor with coiled-coil##AK225846|WAC|51322|WW domain containing adaptor with coiled-coil	0.826735	CTCF.p2:-5:0.827
chr14	106933735	106933874	reg1025849.p1	6.088	+	GQ232933 AY003798 FJ840151 FJ873995 EF407840 AM279492 AM279629 HM774186 AY957513 EF633772 AY062305 DQ524058 AF174122 AY944701 DQ065664 DQ065670 DQ065719 DQ065726 DQ926522 EF178118 EF633803 FJ385316 GU570332 HM995173 HM995251 HM995315 HM995321 HM995523 AB021518 AB021527 AF035043 AF471473 AJ579183 DQ535349 DQ535444 GU570331 GU570333 X95661 Z47231 BC092518 TSC_hg19_v1_chr14_-_106926725 BX647160 AK123783 AK097306 AK097329	-7245	-	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 AJ245014 AJ245018 AJ245021 AJ245023 AJ245024 AJ245030 AJ245033 AJ245034 AJ245038 AJ245056 AJ245060 AJ245061 AJ245071 AJ249629 AJ279514 AJ279515 AJ279525 AJ279530 AJ308449 AJ389175 AJ389176 AJ414019 AJ416561 AJ555264 AJ556674 AJ556675 AJ556676 AJ556691 AJ556693 AJ574781 AJ579117 AJ579126 AJ579130 AJ579131 AJ579134 AJ579138 AJ579166 AJ579168 AJ579169 AJ579170 AJ579179 AJ579200 AJ579202 AJ579205 AJ579209 AJ579210 AJ579214 AJ579244 AJ579245 AJ579292 AJ579293 AJ579297 AJ617569 AY165854 AY268372 AY268373 AY300037 AY577300 AY640552 AY670713 AY670734 AY670740 AY670742 AY670747 AY670751 AY670754 AY670758 AY670762 AY670771 AY670774 AY670799 AY670802 AY670805 AY670817 AY670822 AY670823 AY670825 AY670849 AY670850 AY670858 AY670859 AY670865 AY670874 AY670881 AY670894 AY670896 AY670897 AY670902 AY670914 AY670920 AY670922 AY670947 AY670950 AY670955 AY670960 AY670961 AY670970 AY670972 AY670978 AY670980 AY670986 AY670991 AY671017 AY671060 AY671089 AY671090 AY671101 AY671109 AY671112 AY671114 AY671119 AY671124 AY671126 AY671136 AY671137 AY671140 AY671146 AY671264 AY671318 AY671368 AY671369 AY671384 AY671392 AY671418 AY671433 AY671439 AY671482 AY671489 AY671517 AY671524 AY671534 AY671536 AY671545 AY671552 AY671560 AY671562 AY671563 AY671567 AY671572 AY671576 AY671578 AY671582 AY671583 AY671588 AY671598 AY671599 AY671600 AY671602 AY671616 AY671624 AY671626 AY671635 AY671638 AY671661 AY671672 AY671677 AY671681 AY671730 AY671736 AY671744 AY671752 AY671773 AY671774 AY671778 AY671780 AY671786 AY781849 AY885184 AY941931 AY941962 AY941975 AY960198 AY960201 AY971014 AY971044 AY971045 AY971080 AY971086 AY998723 DQ005257 DQ065676 DQ100673 DQ100687 DQ100701 DQ100784 DQ100821 DQ100822 DQ100824 DQ100825 DQ100897 DQ100953 DQ205162 DQ205173 DQ212518 DQ212520 DQ328872 DQ431572 DQ431610 DQ926162 DQ926290 DQ926291 DQ926302 DQ926317 DQ926323 DQ926515 DQ926519 DQ926521 DQ926608 FJ039783 FJ039790 FJ039791 FJ385371 FJ385402 FR820867 FR820868 FR820869 FR820870 FR820871 FR820872 FR820873 FR820875 GU570374 HM152512 HM152521 HQ689769 JN201901 L12190 L43117 U00494 U00566 U00571 U00578 U00581 U64496 U96278 U96280 U96285 U96287 U97243 X84336 X84339 Y08428 Y09249 Y09390 Z18316 Z46285 Z70608 Z70621 Z70622 Z70623 Z70631 Z70632 Z70654 Z70655 Z70656 Z70657 DQ926182 DQ926347 DQ926348 AY944695 DQ535289 DQ535393 DQ535427 DQ535433 DQ535456 EF177973 EF178111 EF178132 FJ385279 AJ579303 X54447 AY392937 X17678 S63731 X54437 Z14197 AY671021 AY670994 AY671000 AY671001 AY671009 AY671012 AY671016 AY671023 AY671031 AY671036 AY671054 AY671142 AY671197 AY671335 AY671182 AF013622 AY671048 AY671052 AY671159 AY671179 AY671239 AY671263 AY671276 AY671279 AY671282 AF013619 AF062204 AF062240 AF247737 AY671165 AY671185 AY671217 AY671297 AY671693 AY671723 AY671725 CU677619 EU937522 L23556 L38425 M99607 U86523 U86524 X65903 X65911 Z14198 Z75364 Z75388 AY671162 X52895 TSC_hg19_v1_chr14_-_106878091 X56158 M97921 AF417843 AK057754 AK057775 AK130529 BC025985 BX640824 AK130609 Z14206 AK126352 AK129514 AK129592 AK129637 AK130589 AK130611 BC016369 BX538077 BX648082 BX648874 Z14195 AK095222 AK303185	-55897	-	AF460708 AF460709 AF460785 AY003807 AY003817 DQ454548 M33859 M33860 DQ454427 DQ454852 DQ454425 DQ454627 DQ454856 GU552743 DQ454416 DQ454458 GQ232904 GU552731 GU552736 AY003787 AF017463 GU552721 GU552724 GU552725 GU552726 GU552727 GU552728 GU552729 GU552730 AY003850 DQ454418 DQ454671 GQ232774 DQ454432 DQ454433 DQ454901 DQ454979 DQ454980 GQ232865 HM995239 JF810276 AY003855 DQ454422 DQ454434 DQ454622 DQ454870 DQ523887 HM116153 HM116169 HM116182 Z30552 Z30557 Z30561 Z30562 Z30573 Z30576 Z30578 Z30580 Z30581 Z30591 Z30599 Z30674 Z30675 Z30677 DQ454531 DQ454860 DQ454903 EU099089 AF004937 AY003796 AY003804 DQ454392 DQ454610 DQ454833 EU620002 FJ840008 FJ840011 FJ840012 FJ840020 FJ840055 FJ874002 FJ874054 FJ874065 FJ874072 FJ874075 FJ874095 HM116113 HM116114 HM116155 HM116159 HM116160 HM116168 HM116177 HM116195 HM116199 HM116226 AF017459 AF017460 EU619988 AJ487490 AY003825 AJ253061 EU350428 DQ454982 X75022 EF091922 EF175396 EF175402 EF407849 EF441754 GU358660 JF810277 GQ232847 GQ232867 GQ232891 GQ232893 GQ232895 GQ232896 GQ232900 GQ232901 GQ232902 DQ454645 EU099068 EU099071 AF103299 EU090244 EU099076 EU099098 HQ392881 HQ392885 HQ392917 AJ253080 EU099079 EU099096 EU099156 EU099191 EU099252 AJ253066 AM183974 AM183975 AM183976 AM183977 AM183978 AM183995 AF484411 AF103180 AJ253083 AF103278 EF624236 AJ240558 AJ253067 S79918 AJ253059 AJ253072 AJ253074 AJ253079 AJ253081 AJ253082 AJ253084 AJ253087 AJ253088 AJ253089 AJ253090 AJ253091 AJ253092 AJ253093 AJ253094 AJ253095 AJ253098 AJ253102 AJ253103 AJ253104 AJ253108 AJ253109 AJ253110 AJ253112 AJ240555 AJ240556 AJ240557 AJ240560 AJ240561 AJ240566 AJ240574 AJ240575 AJ240576 AJ240577 AJ240580 AJ240581 AJ240590 AJ240595 AJ240604 AJ253044 AJ253050 AJ253054 AJ253077 AJ253085 AY671386 HM996508 Y17927 Y17928 Y17930 Y17931 Y17932 Y17933 Y17934 Y17943 Y17944 Y17945 Y17947 Y17948 Y17949 AY998719 DQ100788 DQ100796 JN110760 JN110800 JN110847 FJ385331 FJ385337 FJ385351 FJ385378 HM774705 HM774878 AF103173 AY193818 EU146315 EU146358 EU146377 EU146394 U21257 U21267 U21268 HM774736 AJ222555 HM995235 X87438 AJ222547 AJ222548 AJ222549 AJ222550 AJ222552 AJ222556 AJ222557 AJ222558 AJ222559 AJ222560 AJ222561 AJ222562 AJ222563 AJ222564 AJ222565 AJ222566 AJ222567 AJ222568 AJ222569 AJ222570 AJ222571 AJ222573 AJ222574 AJ222575 AJ222576 AJ222577 AJ222578 Z46300 Z46301 Z46302 Z46315 Z46316 Z46317 Z46318 Z46319 Z46320 Z46321 Z46322 Z46323 Z46324 Z46325 Z46326 Z46327 Z46328 Z46329 Z46330 Z46331 Z46332 Z46333 Z46334 Z46335 Z46336 Z46337 Z46338 Z46339 Z49139 AJ244942 AJ579251 X64156 X64159 AB063716 AJ244940 AJ279524 AJ279537 AJ556751 AJ579178 AY268371 DQ523935 DQ523975 DQ523980 DQ523984 DQ523987 DQ523990 DQ524003 DQ524006 DQ524007 DQ524018 DQ524044 DQ524065 DQ524068 DQ524074 DQ524077 AB067135 AB067136 AJ244997 AM233792 AM233793 AM233795 AM233801 DQ926349 DQ926350 L34163 X64235 AJ300804 AY670741 AY670790 AY670791 AY670810 AY670816 HM994959 HM995182 HM995183 HM995184 HM995185 HM995187 HM995189 HM995203 HM995204 HM995205 HM995206 HM995207 HM995211 HM995216 HM995244 HM995246 HM995249 HM995308 HM995310 HM995472 HM995477 HM995479 HM995481 HM995550 HM995553 HM995554 HM995743 HM995982 HM996230 HM996238 HM996535 AB063661 AB063671 AB063674 AB066914 AB066915 AB066916 AB066917 AB066918 AB066919 AB066920 AB066921 AB066923 AB066924 AB067034 AB067035 AB067036 AB067037 AB067038 AB067039 AB067040 AB067041 AB067044 AB067046 AB067049 AB067052 AB067053 AB067054 AB067055 AB067056 AB067057 AB067058 AB067059 AB067060 AB067064 AB067066 AB067067 AB067068 AB067084 AB067085 AB067088 AB067089 AB067090 AB067091 AB067092 AB067093 AB067132 AB067133 AB067134 AB067137 AB067142 AB067143 AB067144 AB067145 AB067146 AB067148 AB067149 AB067151 AB110646 AB363152 AB363153 AB363154 AF021948 AF021957 AF021990 AF021991 AF021997 AF022004 AF022005 AF052527 AF062104 AF062113 AF062231 AF062234 AF107233 AF107239 AF107241 AF174041 AF174049 AF174054 AF174085 AF174086 AF174088 AF245309 AF262072 AF262097 AF262100 AF262125 AF262174 AF372845 AJ239335 AJ239362 AJ239377 AJ244929 AJ244931 AJ244935 AJ244937 AJ244938 AJ244939 AJ244941 AJ244943 AJ244944 AJ244951 AJ244959 AJ244960 AJ244962 AJ244966 AJ244967 AJ244968 AJ244969 AJ244972 AJ244973 AJ244975 AJ244978 AJ244982 AJ244984 AJ244985 AJ244987 AJ244988 AJ244990 AJ244991 AJ244992 AJ244994 AJ245008 AJ245009 AJ245011 AJ245013 AJ245017 AJ245028 AJ245035 AJ245036 AJ245039 AJ245040 AJ245041 AJ245042 AJ245043 AJ245044 AJ245046 AJ245049 AJ245051 AJ245052 AJ245054 AJ245057 AJ245065 AJ245236 AJ245238 AJ249631 AJ279513 AJ279519 AJ279521 AJ279526 AJ279531 AJ279535 AJ556773 AJ574778 AJ579118 AJ579121 AJ579122 AJ579124 AJ579129 AJ579135 AJ579164 AJ579165 AJ579167 AJ579175 AJ579176 AJ579201 AJ579206 AJ579208 AJ579211 AJ579213 AJ579240 AJ579241 AJ579242 AJ579243 AJ579246 AJ579248 AJ579249 AJ579250 AJ579253 AJ579255 AJ579256 AJ579257 AJ579258 AJ579259 AJ579260 AJ579286 AJ579287 AJ579289 AJ579290 AJ579302 AJ579304 AY033257 AY062304 AY553641 AY553646 AY670708 AY670709 AY670710 AY670711 AY670716 AY670717 AY670718 AY670720 AY670721 AY670722 AY670723 AY670724 AY670730 AY670736 AY670738 AY670739 AY670743 AY670749 AY670750 AY670755 AY670757 AY670760 AY670761 AY670763 AY670766 AY670767 AY670768 AY670772 AY670775 AY670777 AY670779 AY670781 AY670782 AY670785 AY670787 AY670789 AY670794 AY670795 AY670796 AY670798 AY670801 AY670803 AY670804 AY670811 AY670813 AY670814 AY670815 AY670824 AY670826 AY670827 AY670828 AY670833 AY670834 AY670835 AY670838 AY670839 AY670840 AY670841 AY670842 AY670843 AY670845 AY670846 AY670851 AY670853 AY670855 AY670856 AY670860 AY670863 AY670864 AY670867 AY670870 AY670871 AY670873 AY670875 AY670878 AY670879 AY670882 AY670883 AY670884 AY670885 AY670890 AY670892 AY670893 AY670898 AY670899 AY670900 AY670903 AY670904 AY670905 AY670907 AY670911 AY670913 AY670916 AY670918 AY670919 AY670924 AY670928 AY670929 AY670931 AY670932 AY670935 AY670940 AY670943 AY670944 AY670946 AY670949 AY670952 AY670953 AY670954 AY670962 AY670965 AY670973 AY670974 AY670975 AY670976 AY670977 AY670981 AY670990 AY671010 AY671015 AY671024 AY671047 AY671065 AY671073 AY671078 AY671079 AY671087 AY671093 AY671094 AY671095 AY671096 AY671097 AY671099 AY671100 AY671103 AY671104 AY671105 AY671106 AY671107 AY671108 AY671110 AY671113 AY671115 AY671117 AY671118 AY671120 AY671121 AY671122 AY671123 AY671125 AY671128 AY671129 AY671132 AY671134 AY671135 AY671139 AY671145 AY671153 AY671155 AY671161 AY671209 AY671240 AY671245 AY671257 AY671274 AY671277 AY671283 AY671313 AY671314 AY671315 AY671316 AY671317 AY671319 AY671321 AY671322 AY671323 AY671328 AY671330 AY671332 AY671341 AY671345 AY671347 AY671348 AY671349 AY671354 AY671364 AY671366 AY671370 AY671371 AY671380 AY671382 AY671383 AY671393 AY671409 AY671413 AY671416 AY671422 AY671424 AY671425 AY671427 AY671428 AY671429 AY671430 AY671434 AY671435 AY671436 AY671438 AY671441 AY671443 AY671444 AY671445 AY671446 AY671447 AY671449 AY671452 AY671453 AY671454 AY671455 AY671461 AY671462 AY671464 AY671468 AY671471 AY671478 AY671480 AY671481 AY671483 AY671486 AY671487 AY671491 AY671492 AY671503 AY671505 AY671507 AY671508 AY671510 AY671511 AY671515 AY671518 AY671519 AY671525 AY671527 AY671528 AY671530 AY671532 AY671535 AY671538 AY671539 AY671540 AY671541 AY671543 AY671544 AY671548 AY671555 AY671556 AY671561 AY671564 AY671565 AY671566 AY671568 AY671573 AY671574 AY671577 AY671579 AY671580 AY671581 AY671585 AY671587 AY671591 AY671593 AY671595 AY671612 AY671614 AY671617 AY671619 AY671620 AY671625 AY671629 AY671630 AY671632 AY671634 AY671637 AY671640 AY671642 AY671644 AY671648 AY671650 AY671651 AY671653 AY671658 AY671659 AY671660 AY671663 AY671668 AY671671 AY671676 AY671682 AY671684 AY671685 AY671688 AY671690 AY671691 AY671694 AY671697 AY671698 AY671699 AY671700 AY671702 AY671704 AY671706 AY671707 AY671708 AY671712 AY671716 AY671718 AY671724 AY671732 AY671733 AY671734 AY671735 AY671737 AY671739 AY671741 AY671746 AY671749 AY671750 AY671751 AY671753 AY671756 AY671763 AY671764 AY671765 AY671766 AY671767 AY671769 AY671771 AY671776 AY671781 AY671784 AY885181 AY941889 AY941914 AY941957 DQ005274 DQ005285 DQ100660 DQ100674 DQ100703 DQ100725 DQ100792 DQ100829 DQ100832 DQ100964 DQ926158 DQ926198 DQ926208 DQ926421 DQ926458 DQ926468 DQ926470 DQ926478 DQ926497 DQ926599 DQ926603 EF544907 EF544958 EF544959 EF544973 FJ208782 FJ492903 FJ492909 FJ492910 GU570373 HM152498 HM152511 HM152516 HQ392880 HQ689741 L12192 L23518 L23934 L25293 M26998 M74468 S64473 S66098 S67110 U00497 U00556 U22391 U71103 U89766 U97246 X56592 X87440 Z35492 Z46269 Z46271 Z46272 Z46273 Z46275 Z46277 Z46279 Z46282 Z46304 Z46305 Z46306 Z46307 Z46308 Z46340 Z46341 Z46342 Z49135 Z49140 Z49141 Z49143 Z70604 Z70605 Z70610 Z70616 Z70617 Z70625 Z70626 Z70627 Z70637 Z70638 Z70639 Z70640 Z70641 Z70642 Z70643 Z70644 Z70650 Z74665 Z74695 AY670806 AY670808 AY957532 AY686937 AY957534 DQ535279 DQ535294 DQ535296 DQ535314 DQ535320 DQ535326 DQ535459 EF178028 EF178136 HM996258 M84508 FJ039792 M84512 X54441 AY671298 AY670999 AY671028 AF283780 AF283781 M74018 M74021 AY670983 AY670985 AY670987 AY670989 AY670992 AY670993 AY670995 AY670997 AY670998 AY671018 AY671025 AY671033 AY671043 AY671307 AY671310 AY671046 AY671049 AY671205 AF283784 AY671151 AY671233 AJ579207 AY670982 AY671003 AY671029 AY671050 AY671156 AY671160 AY671171 AY671177 AY671190 AY671199 AY671201 AY671212 AY671226 AY671232 AY671235 AY671236 AY671250 AY671251 AY671261 AY671262 AY671270 AY671272 AY671278 AY671281 AY671287 AY671308 Z47229 AF062101 AF062146 AF062152 AF062158 AF062173 AF062181 AF062183 AF062187 AF062192 AF062196 AF062217 AF062218 AF062250 AJ579203 AY204755 AY204757 AY204759 AY204761 AY671006 AY671008 AY671061 AY671064 AY671168 AY671175 AY671183 AY671200 AY671207 AY671220 AY671238 AY671258 AY671268 AY671275 AY671289 AY671290 AY671303 AY671305 AY671696 AY671705 AY671713 AY671722 AY671727 AY671728 S59161 X64152 X64153 X65904 Z47228 Z47234 Z47241 Z75362 Z75374 Z75376 Z75379 Z75386 Z75389 Z75392 Z75394 Z75398 CU674902 CU678316 BC002963 BC073767 CU675962 BC017356 BC019235 BC001872 BC006180 BX538126 AK301454 TSC_hg19_v1_chr14_-_106830060 AK126280 AK128649 AK127921 CR933690	-103898	-	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	4654	+	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	33496	-	BX640710 TSC_hg19_v1_chr14_-_106967543 AK097354 AK097357 L22586 AK092384 AK125238 AX747511 AK125703 AK092976 AX747834 AK097028 L06610	33763	-	BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF174049|SKAP2|8935|src kinase associated phosphoprotein 2##BC002963|IGHM|3507|immunoglobulin heavy constant mu##BC073767|IGHM|3507|immunoglobulin heavy constant mu##BC017356|IGHM|3507|immunoglobulin heavy constant mu##BC019235|IGHM|3507|immunoglobulin heavy constant mu##BC001872|IGHM|3507|immunoglobulin heavy constant mu##BC006180|IGHM|3507|immunoglobulin heavy constant mu##BX538126|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK126280|IGHD|3495|immunoglobulin heavy constant delta##AK128649|IGHD|3495|immunoglobulin heavy constant delta##AK127921|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640710|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK097354|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097357|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK092384|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125238|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092976|IGHM|3507|immunoglobulin heavy constant mu##AK097028|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.968059	CTCF.p2:13:0.968
chrX	102413071	102413197	reg1021556.p1	6.088	+	CU689204 DQ891319 DQ894503 BC031616 AF346619 AJ277527 NM_022052 AK302447 TSC_hg19_v1_chrX_-_102348072 AK302586	-65081	-	TSC_hg19_v1_chrX_-_102319100 AF237783 AK290958 NM_018476	-94003	-	AF220189 AY833561 TSC_hg19_v1_chrX_-_102319085	-94052	-	TSC_hg19_v1_chrX_+_102470035 NM_001080425 NM_001127688 AK000959 AY833563 BC015794 BC068069	56915	+	TSC_hg19_v1_chrX_-_102510102 AK026349 AL833632 NM_001006684 NM_153333	96956	-	BC132922 BC132924 NM_001012979	118600	-	DQ891319|NXF3|56000|nuclear RNA export factor 3##DQ894503|NXF3|56000|nuclear RNA export factor 3##BC031616|NXF3|56000|nuclear RNA export factor 3##AF346619|NXF3|56000|nuclear RNA export factor 3##AJ277527|NXF3|56000|nuclear RNA export factor 3##NM_022052|NXF3|56000|nuclear RNA export factor 3##AK302447|NXF3|56000|nuclear RNA export factor 3##AK302586|NXF3|56000|nuclear RNA export factor 3##AF237783|BEX1|55859|brain expressed, X-linked 1##AK290958|BEX1|55859|brain expressed, X-linked 1##NM_018476|BEX1|55859|brain expressed, X-linked 1##AF220189|BEX1|55859|brain expressed, X-linked 1##AY833561|BEX1|55859|brain expressed, X-linked 1##NM_001080425|BEX4|56271|brain expressed, X-linked 4##NM_001127688|BEX4|56271|brain expressed, X-linked 4##AK000959|BEX4|56271|brain expressed, X-linked 4##AY833563|BEX4|56271|brain expressed, X-linked 4##BC015794|BEX4|56271|brain expressed, X-linked 4##BC068069|BEX4|56271|brain expressed, X-linked 4##AK026349|TCEAL8|90843|transcription elongation factor A (SII)-like 8##AL833632|TCEAL8|90843|transcription elongation factor A (SII)-like 8##NM_001006684|TCEAL8|90843|transcription elongation factor A (SII)-like 8##NM_153333|TCEAL8|90843|transcription elongation factor A (SII)-like 8##BC132922|TCEAL5|340543|transcription elongation factor A (SII)-like 5##BC132924|TCEAL5|340543|transcription elongation factor A (SII)-like 5##NM_001012979|TCEAL5|340543|transcription elongation factor A (SII)-like 5	0.224661	CTCF.p2:3:0.225
chr10	127031868	127031981	reg1020679.p1	6.087	+	TSC_hg19_v1_chr10_-_126849600 BC047018 NM_001083914	-182331	-	BC052276 AL833398 BC002486 TSC_hg19_v1_chr10_-_126849101 NM_001329	-182808	-	TSC_hg19_v1_chr10_-_126849010 AF016507 BC072020	-182898	-	BC127766 BC127767 AK131010 BC062717 NM_001128202	339728	-	TSC_hg19_v1_chr10_-_127408052 BC015213 AK094354	376110	-	BC026172 NM_001202438 NM_015608 BC028715 TSC_hg19_v1_chr10_+_127408115 BC105929 BC107479	376189	+	BC047018|CTBP2|1488|C-terminal binding protein 2##NM_001083914|CTBP2|1488|C-terminal binding protein 2##BC052276|CTBP2|1488|C-terminal binding protein 2##AL833398|CTBP2|1488|C-terminal binding protein 2##BC002486|CTBP2|1488|C-terminal binding protein 2##NM_001329|CTBP2|1488|C-terminal binding protein 2##AF016507|CTBP2|1488|C-terminal binding protein 2##BC072020|CTBP2|1488|C-terminal binding protein 2##BC127766|C10orf122|387718|chromosome 10 open reading frame 122##BC127767|C10orf122|387718|chromosome 10 open reading frame 122##AK131010|C10orf122|387718|chromosome 10 open reading frame 122##BC062717|C10orf122|387718|chromosome 10 open reading frame 122##NM_001128202|C10orf122|387718|chromosome 10 open reading frame 122##AK094354|FLJ37035|399821|uncharacterized LOC399821##BC026172|C10orf137|26098|chromosome 10 open reading frame 137##NM_001202438|C10orf137|26098|chromosome 10 open reading frame 137##NM_015608|C10orf137|26098|chromosome 10 open reading frame 137##BC028715|C10orf137|26098|chromosome 10 open reading frame 137##BC105929|C10orf137|26098|chromosome 10 open reading frame 137##BC107479|C10orf137|26098|chromosome 10 open reading frame 137	0.987478	CTCF.p2:-23:0.987
chr16	49891676	49891822	reg1023652.p2	6.087	+	NM_015069	-30832	-	BC021181 BC021718 NM_144602 CU676858	-483921	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-576015	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	167391	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	208144	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	208211	+	NM_015069|ZNF423|23090|zinc finger protein 423##BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3	0.994463	CTCF.p2:-5:0.994
chr2	127955498	127955613	reg1019088.p1	6.087	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	-90814	-	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-541763	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-541848	+	BC039307 NM_001001665	7787	-	AK131190 TSC_hg19_v1_chr2_-_127977781	22162	-	AK091500 CU679129 DQ893802 EU176179 AB384812 AK095557 AK290474 AK309405 TSC_hg19_v1_chr2_-_128051698	96122	-	AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK091500|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##DQ893802|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##EU176179|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK095557|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK290474|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK309405|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)	0.849427	CTCF.p2:8:0.849
chr10	119620477	119620607	reg1024190.p1	6.086	+	TSC_hg19_v1_chr10_+_119302713 AB463605	-317799	+	AF301598 NM_001165924 NM_004098	-318587	+	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	-318626	-	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	185502	-	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	185888	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	481282	-	AF301598|EMX2|2018|empty spiracles homeobox 2##NM_001165924|EMX2|2018|empty spiracles homeobox 2##NM_004098|EMX2|2018|empty spiracles homeobox 2##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A	0.658055	CTCF.p2:3:0.658
chr15	85956779	85956943	reg1021593.p1	6.086	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	-32970	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-290543	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-431535	+	AF127481 NM_144767	263406	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	381236	-	TSC_hg19_v1_chr15_-_86338178 NM_022480	381334	-	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)	0.0	
chr19	24000452	24000578	reg1024245.p1	6.086	+	TSC_hg19_v1_chr19_+_23945812 BC071971	-54702	+	BC136346 AK056088 BC062216 TSC_hg19_v1_chr19_-_23941693 AK122869 NM_138286	-58880	-	AY044432 AK307845 BC032394 AK093669 AX748253 NM_138330	-130538	-	TSC_hg19_v1_chr19_+_24097711 NM_001244038 AX721133 BC046415 AB593087	97179	+	TSC_hg19_v1_chr19_+_24216256 AK092150 AK092080 AK303431	215741	+	TSC_hg19_v1_chr19_+_24269988 AF054180 NM_203282 BC056243 AK291286 BC043147 BC139749	269454	+	BC071971|RPSAP58|388524|ribosomal protein SA pseudogene 58##BC136346|ZNF681|148213|zinc finger protein 681##AK056088|ZNF681|148213|zinc finger protein 681##BC062216|ZNF681|148213|zinc finger protein 681##AK122869|ZNF681|148213|zinc finger protein 681##NM_138286|ZNF681|148213|zinc finger protein 681##AY044432|ZNF675|171392|zinc finger protein 675##AK307845|ZNF675|171392|zinc finger protein 675##AK093669|ZNF675|171392|zinc finger protein 675##NM_138330|ZNF675|171392|zinc finger protein 675##NM_001244038|ZNF726|730087|zinc finger protein 726##BC046415|ZNF726|730087|zinc finger protein 726##AK303431|ZNF254|9534|zinc finger protein 254##AF054180|ZNF254|9534|zinc finger protein 254##NM_203282|ZNF254|9534|zinc finger protein 254##BC056243|ZNF254|9534|zinc finger protein 254##AK291286|ZNF254|9534|zinc finger protein 254##BC043147|ZNF254|9534|zinc finger protein 254##BC139749|ZNF254|9534|zinc finger protein 254	0.06057	
chr4	81540396	81540535	reg1026195.p1	6.086	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-283568	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	-352606	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	-421811	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	411677	+	AB528214 D70899 NM_006259 X94612	585742	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	852518	-	BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B	0.996981	CTCF.p2:-28:0.997
chr7	129572723	129572832	reg1022375.p1	6.086	+	L22454 NM_001040110	-302860	+	AK293351 TSC_hg19_v1_chr7_+_129251621 BC016925 AK290891	-321165	+	TSC_hg19_v1_chr7_+_129251531 NM_005011	-321236	+	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	19974	-	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	20032	-	TSC_hg19_v1_chr7_-_129691215 BC000190 AB463378 AJ537494 AM393415 CU679956 BC011551 AF151050 AK001317 AK022373 NM_016478	118444	-	L22454|NRF1|4899|nuclear respiratory factor 1##NM_001040110|NRF1|4899|nuclear respiratory factor 1##AK293351|NRF1|4899|nuclear respiratory factor 1##BC016925|NRF1|4899|nuclear respiratory factor 1##AK290891|NRF1|4899|nuclear respiratory factor 1##NM_005011|NRF1|4899|nuclear respiratory factor 1##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC000190|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AJ537494|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AM393415|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC011551|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AF151050|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK001317|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK022373|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_016478|ZC3HC1|51530|zinc finger, C3HC-type containing 1	0.0	
chr9	109625105	109625240	reg1022766.p2	6.086	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-1168254	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	-1168319	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	-1200415	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	192	+	TSC_hg19_v1_chr9_+_109686439 CR749850	61297	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	420360	+	AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##CR749850|ZNF462|58499|zinc finger protein 462##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.050328	
chrX	45661121	45661244	reg1022027.p1	6.086	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	-601069	-	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-928746	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-957869	+	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	645529	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	743674	-	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	743762	+	BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588	0.999078	CTCF.p2:-28:0.999
chr14	53792050	53792179	reg1023156.p1	6.085	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-172064	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-172146	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-172241	-	NM_130851	629155	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	631419	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	1071607	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.01543	
chr2	2702439	2702555	reg1024070.p1	6.085	+	TSC_hg19_v1_chr2_-_2335085 AK307797	-367413	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	-367532	-	BC031690 TSC_hg19_v1_chr2_-_1946938	-755591	-	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	679059	-	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	681008	+	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	820801	-	AK307797|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1	0.792793	CTCF.p2:2:0.793
chr5	51652260	51652385	reg1022158.p1	6.085	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	-973069	+	BC031213 NM_002202	-973365	+	TSC_hg19_v1_chr5_+_49962920 AB463183 AM393004	-1689395	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	431667	+	AK025729 BC007650 TSC_hg19_v1_chr5_+_52095991 BC005889 BC007249 AF132951 AK312633 AF139828 BC022789	443664	+	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	632798	+	AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##BC031213|ISL1|3670|ISL LIM homeobox 1##NM_002202|ISL1|3670|ISL LIM homeobox 1##AM393004|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1##AK025729|PELO|53918|pelota homolog (Drosophila)##BC007650|PELO|53918|pelota homolog (Drosophila)##BC005889|PELO|53918|pelota homolog (Drosophila)##BC007249|PELO|53918|pelota homolog (Drosophila)##AF132951|PELO|53918|pelota homolog (Drosophila)##AK312633|PELO|53918|pelota homolog (Drosophila)##AF139828|PELO|53918|pelota homolog (Drosophila)##BC022789|PELO|53918|pelota homolog (Drosophila)##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	0.136917	
chr6	100270738	100270840	reg1023504.p1	6.085	+	AY004253 NM_021620	-216140	+	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	-254186	-	CU679631 CU691126 AB528579 AB125137 BC050726 TSC_hg19_v1_chr6_-_100016505 AK223247 M74091 AK291914 AK222768 BC026272 BC030159 BC056153	-254332	-	AK123634 NM_001040179 NM_032503 AF347063	171321	-	NM_005068 U70212	640761	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	1058311	-	AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##AB125137|CCNC|892|cyclin C##BC050726|CCNC|892|cyclin C##AK223247|CCNC|892|cyclin C##M74091|CCNC|892|cyclin C##AK291914|CCNC|892|cyclin C##AK222768|CCNC|892|cyclin C##BC026272|CCNC|892|cyclin C##BC030159|CCNC|892|cyclin C##BC056153|CCNC|892|cyclin C##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.595379	CTCF.p2:8:0.595
chr2	224724894	224725005	reg1024322.p2	6.084	+	TSC_hg19_v1_chr2_-_224702300 BC009606 NM_001039569	-22639	-	AF393369 BC021898 TSC_hg19_v1_chr2_-_224702284 AK025338 AK299026	-22700	-	TSC_hg19_v1_chr2_-_224467145 NM_003469	-257770	-	TSC_hg19_v1_chr2_-_224810010 AF411977 AB527455 CU691898	85044	-	BC040525 AB037856 TSC_hg19_v1_chr2_-_224810016	85066	-	TSC_hg19_v1_chr2_-_224810020 AK023415 AK022888	85075	-	BC009606|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##NM_001039569|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AF393369|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##BC021898|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK025338|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK299026|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##NM_003469|SCG2|7857|secretogranin II##AF411977|WDFY1|57590|WD repeat and FYVE domain containing 1##BC040525|WDFY1|57590|WD repeat and FYVE domain containing 1##AB037856|WDFY1|57590|WD repeat and FYVE domain containing 1##AK023415|WDFY1|57590|WD repeat and FYVE domain containing 1##AK022888|WDFY1|57590|WD repeat and FYVE domain containing 1	0.0	
chr2	8443754	8443934	reg1024658.p2	6.084	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1386257	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1425981	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1437141	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	378359	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	533875	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	699977	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr10	134385535	134385663	reg1023666.p1	6.083	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	-34287	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-126916	+	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	-174890	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	213907	-	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	370439	-	NM_001083909 TSC_hg19_v1_chr10_+_134901429 AK124728	515858	+	BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40##NM_001083909|GPR123|84435|G protein-coupled receptor 123##AK124728|GPR123|84435|G protein-coupled receptor 123	0.0	
chr12	100161732	100161838	reg1025406.p1	6.083	+	NM_153364 AK312767 BC031221	-120255	+	AK294191 NM_001204067	-612918	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	-613228	-	NM_152788	216646	-	BC127017 AK125813 TSC_hg19_v1_chr12_-_100536637 BC014891	374764	-	TSC_hg19_v1_chr12_-_100536644 NM_001006947 NM_015054	374863	-	NM_153364|FAM71C|196472|family with sequence similarity 71, member C##AK312767|FAM71C|196472|family with sequence similarity 71, member C##BC031221|FAM71C|196472|family with sequence similarity 71, member C##AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_152788|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC127017|UHRF1BP1L|23074|UHRF1 binding protein 1-like##AK125813|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC014891|UHRF1BP1L|23074|UHRF1 binding protein 1-like##NM_001006947|UHRF1BP1L|23074|UHRF1 binding protein 1-like##NM_015054|UHRF1BP1L|23074|UHRF1 binding protein 1-like	0.920072	CTCF.p2:3:0.920
chr14	35731113	35731246	reg1024917.p1	6.083	+	TSC_hg19_v1_chr14_+_35591757 AK301931 BC050339 BC044580 BC001542 AK304066 BC032221 NM_014672 AB002389 BX161394 BX161487 AK303508	-139327	+	AK293717 BX248043 TSC_hg19_v1_chr14_-_35591728	-139489	-	AK000651 AK225512 AK225447 TSC_hg19_v1_chr14_-_35591505 BC063438 BC100021 AY157304 AY157305 NM_017917	-139701	-	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	30392	+	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	30464	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	142745	-	AK301931|KIAA0391|9692|KIAA0391##BC044580|KIAA0391|9692|KIAA0391##BC001542|KIAA0391|9692|KIAA0391##AK304066|KIAA0391|9692|KIAA0391##BC032221|KIAA0391|9692|KIAA0391##NM_014672|KIAA0391|9692|KIAA0391##AB002389|KIAA0391|9692|KIAA0391##BX161394|KIAA0391|9692|KIAA0391##BX161487|KIAA0391|9692|KIAA0391##AK303508|KIAA0391|9692|KIAA0391##AK293717|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BX248043|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK000651|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK225512|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK225447|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BC063438|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BC100021|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AY157304|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AY157305|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##NM_017917|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	0.96992	CTCF.p2:-12:0.970
chr21	33775590	33775720	reg1022284.p1	6.083	+	TSC_hg19_v1_chr21_+_33765423 BC007928 AK026376	-10218	+	AF231919 TSC_hg19_v1_chr21_-_33765328 NM_014825	-10399	-	AF454915 AF454916 NM_178817 NM_206898	-111532	+	AY358787 NM_058187	9096	+	AK223529 AF115967 BC022024 BC033855 AK058078 NM_144659	182140	-	DQ655907 DQ655908 TSC_hg19_v1_chr21_-_33984495 CU674350 DQ656039	208867	-	BC007928|C21orf119|84996|chromosome 21 open reading frame 119##AK026376|C21orf119|84996|chromosome 21 open reading frame 119##AF231919|URB1|9875|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)##NM_014825|URB1|9875|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)##AF454915|MRAP|56246|melanocortin 2 receptor accessory protein##AF454916|MRAP|56246|melanocortin 2 receptor accessory protein##NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein##NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein##AY358787|C21orf63|59271|chromosome 21 open reading frame 63##NM_058187|C21orf63|59271|chromosome 21 open reading frame 63##AK223529|TCP10L|140290|t-complex 10 (mouse)-like##AF115967|TCP10L|140290|t-complex 10 (mouse)-like##BC022024|TCP10L|140290|t-complex 10 (mouse)-like##BC033855|TCP10L|140290|t-complex 10 (mouse)-like##AK058078|TCP10L|140290|t-complex 10 (mouse)-like##NM_144659|TCP10L|140290|t-complex 10 (mouse)-like##DQ655907|C21orf59|56683|chromosome 21 open reading frame 59##DQ655908|C21orf59|56683|chromosome 21 open reading frame 59##DQ656039|C21orf59|56683|chromosome 21 open reading frame 59	0.749535	CTCF.p2:-27:0.750
chr19	2199357	2199524	reg1024742.p2	6.082	+	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	-35302	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-47887	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	-47898	-	BC021037 TSC_hg19_v1_chr19_+_2222534	23034	+	BC032803 TSC_hg19_v1_chr19_+_2232168	32681	+	CR457253 CU679203 TSC_hg19_v1_chr19_-_2236329 AK092742 AX747701 BC003084 BC008966 AK001159 NM_018049	36849	-	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##CR457253|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK092742|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC003084|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC008966|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK001159|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##NM_018049|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1	0.0	
chr3	48507566	48507722	reg1007284.p3	6.082	+	BC019863 TSC_hg19_v1_chr3_+_48507228 NM_016381 NM_033629 AF151105 AJ243797	-365	+	TSC_hg19_v1_chr3_+_48488182 AK291829 BC014153 BC020563 AF451323 NM_032166 NM_130384 CU676562 EU832638 EU832715 AF319566	-19430	+	TSC_hg19_v1_chr3_+_48488138 AK300548 AK315075	-19501	+	TSC_hg19_v1_chr3_+_48507641 AK315196 BC023630	2	+	TSC_hg19_v1_chr3_-_48514495 AB097007 BC020279 AL117413 AK310083 AL832568 AF151051 BC001463 AK027728 AK298799	6887	-	AK124652 TSC_hg19_v1_chr3_-_48541588 AB527510 AK075441 AF520698 NM_016479	33930	-	BC019863|TREX1|11277|three prime repair exonuclease 1##NM_016381|TREX1|11277|three prime repair exonuclease 1##NM_033629|TREX1|11277|three prime repair exonuclease 1##AF151105|TREX1|11277|three prime repair exonuclease 1##AJ243797|TREX1|11277|three prime repair exonuclease 1##AK291829|ATRIP|84126|ATR interacting protein##BC014153|ATRIP|84126|ATR interacting protein##BC020563|ATRIP|84126|ATR interacting protein##AF451323|ATRIP|84126|ATR interacting protein##NM_032166|ATRIP|84126|ATR interacting protein##NM_130384|ATRIP|84126|ATR interacting protein##EU832638|TREX1|11277|three prime repair exonuclease 1##EU832715|TREX1|11277|three prime repair exonuclease 1##AK300548|ATRIP|84126|ATR interacting protein##AK315075|ATRIP|84126|ATR interacting protein##AK315196|TREX1|11277|three prime repair exonuclease 1##BC023630|TREX1|11277|three prime repair exonuclease 1##AB097007|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC020279|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL117413|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL832568|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF151051|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC001463|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK298799|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK124652|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK075441|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF520698|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##NM_016479|SHISA5|51246|shisa homolog 5 (Xenopus laevis)	0.0	
chr7_gl000195_random	95212	95304	reg1021557.p2	6.082	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr16	53777108	53777238	reg1024512.p1	6.081	+	TSC_hg19_v1_chr16_+_53738067 AK096554 AB051539 AK295196	-39105	+	NM_001080432	-39299	+	TSC_hg19_v1_chr16_-_53737760 BC136433 AK096333 AK308390 BC017977 CR749645 AK307929 EF565106 NM_001127897 NM_015272 AK304790	-39416	-	BC034328 TSC_hg19_v1_chr16_-_54319025	541791	-	TSC_hg19_v1_chr16_+_54319531 AK309303	542348	+	DQ892008 EU176666 TSC_hg19_v1_chr16_-_54320043	542833	-	AK096554|FTO|79068|fat mass and obesity associated##AB051539|FTO|79068|fat mass and obesity associated##AK295196|FTO|79068|fat mass and obesity associated##NM_001080432|FTO|79068|fat mass and obesity associated##BC136433|RPGRIP1L|23322|RPGRIP1-like##AK096333|RPGRIP1L|23322|RPGRIP1-like##AK308390|RPGRIP1L|23322|RPGRIP1-like##BC017977|RPGRIP1L|23322|RPGRIP1-like##CR749645|RPGRIP1L|23322|RPGRIP1-like##AK307929|RPGRIP1L|23322|RPGRIP1-like##EF565106|RPGRIP1L|23322|RPGRIP1-like##NM_001127897|RPGRIP1L|23322|RPGRIP1-like##NM_015272|RPGRIP1L|23322|RPGRIP1-like##AK304790|RPGRIP1L|23322|RPGRIP1-like##BC034328|IRX3|79191|iroquois homeobox 3##DQ892008|IRX3|79191|iroquois homeobox 3##EU176666|IRX3|79191|iroquois homeobox 3	0.911504	CTCF.p2:10:0.912
chr5	177409265	177409331	reg1022630.p1	6.081	+	AB018295 NM_173663	-201814	-	TSC_hg19_v1_chr5_-_177099217 AK297457	-310069	-	TSC_hg19_v1_chr5_+_177027143 BC007317 NM_007255 BC072403 AY358578 BC062983 AB028600 AK023506 AF142675 DQ893010 DQ896256 AB527637 AJ005382	-382144	+	AF076215 NM_006261	13944	-	TSC_hg19_v1_chr5_+_177482580 AB055766	73280	+	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	131330	+	AB018295|FAM153A|285596|family with sequence similarity 153, member A##NM_173663|FAM153A|285596|family with sequence similarity 153, member A##AK297457|LOC202181|202181|chromosome 5 open reading frame 25 pseudogene##BC007317|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##NM_007255|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC072403|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AY358578|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC062983|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AB028600|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AK023506|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF142675|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ893010|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ896256|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AJ005382|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF076215|PROP1|5626|PROP paired-like homeobox 1##NM_006261|PROP1|5626|PROP paired-like homeobox 1##AB055766|RPL19|6143|ribosomal protein L19##BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3	0.0	
chr1	47341872	47341996	reg1022840.p1	6.080	+	AK300921 NM_000779 NM_001099772 AK225576 AK225578 AK313170 BC017758 AK307715 J02871 DQ892010 DQ895199 CU676044 AF491285 AY064484 AY064485 AY064486 AY151048 AY151049 X16699	-77223	+	TSC_hg19_v1_chr1_-_47184796 AK296777	-157118	-	TSC_hg19_v1_chr1_-_47184742 AB007963 NM_014774	-157198	-	TSC_hg19_v1_chr1_-_47407139 AK298267 AK298413 CU692736 D26481 D13705 L04751 BC041158 S67580 S67581	65183	-	TSC_hg19_v1_chr1_-_47407149 BC022851 NM_000778	65214	-	BC028102 NM_178033 AK098065 AY358537 AM040940 DQ891655 DQ891656 DQ894843 EU176287 CU688398	147429	+	AK300921|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##NM_000779|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##NM_001099772|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK225576|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK225578|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK313170|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##BC017758|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK307715|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##J02871|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##DQ892010|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##DQ895199|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AF491285|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY064484|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY064485|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY064486|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY151048|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY151049|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##X16699|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AB007963|KIAA0494|9813|KIAA0494##NM_014774|KIAA0494|9813|KIAA0494##AK298267|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##AK298413|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##D26481|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##D13705|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##L04751|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC041158|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##S67580|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##S67581|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC022851|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##NM_000778|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC028102|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##NM_178033|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AK098065|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AY358537|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AM040940|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891655|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891656|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ894843|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##EU176287|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1	0.845303	CTCF.p2:-19:0.845
chr10	92980428	92980521	reg1024302.p1	6.079	+	TSC_hg19_v1_chr10_+_92980445 NM_032373	-66	+	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	-57712	+	X83703 NM_014391	-299446	-	TSC_hg19_v1_chr10_+_92980539 AL832496	60	+	BC071762 TSC_hg19_v1_chr10_+_93170064	189584	+	TSC_hg19_v1_chr10_+_93170100 NM_173497 NM_182765 AK295723 AK094625 BC040187 EU832472 EU832551 BX537856	189707	+	NM_032373|PCGF5|84333|polycomb group ring finger 5##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5##X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AL832496|PCGF5|84333|polycomb group ring finger 5##NM_173497|HECTD2|143279|HECT domain containing 2##NM_182765|HECTD2|143279|HECT domain containing 2##AK295723|HECTD2|143279|HECT domain containing 2##AK094625|HECTD2|143279|HECT domain containing 2##BC040187|HECTD2|143279|HECT domain containing 2##EU832472|HECTD2|143279|HECT domain containing 2##EU832551|HECTD2|143279|HECT domain containing 2##BX537856|HECTD2|143279|HECT domain containing 2	0.15476	
chr11	118691562	118691743	reg1018858.p1	6.079	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-29718	-	TSC_hg19_v1_chr11_-_118661865 Z11685	-29773	-	TSC_hg19_v1_chr11_-_118661860 BC026228	-29793	-	AK291512 NM_001716 BC110352 X68149 AB464488	62908	+	NM_032966 X68829	72448	+	AB094091 NM_182557	89960	-	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like	0.0	
chr13	41985875	41985963	reg1019669.p1	6.079	+	NM_001110798 NM_018527 NM_024561 TSC_hg19_v1_chr13_+_41885376 BC064592 BC032318 AK291248 AK097224 BX640665 BC101719 BC101721 BC143506 CU689326	-100417	+	AK055086 AF072934 TSC_hg19_v1_chr13_-_41837713 BC027731 BC038427 BC042196 BC065496 NM_004294 AK294343	-148239	-	TSC_hg19_v1_chr13_-_41768706 AK299614 AL136782 AK315589 BC022033 FJ150424 NM_032138 AK091344 AX746923	-217294	-	TSC_hg19_v1_chr13_+_42031539 NM_014059	45632	+	TSC_hg19_v1_chr13_+_42031685 BC066334	45764	+	TSC_hg19_v1_chr13_+_42031690 BC038706 AF036549	45781	+	NM_001110798|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_018527|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_024561|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC064592|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC032318|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK291248|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK097224|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BX640665|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101719|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101721|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC143506|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK055086|MTRF1|9617|mitochondrial translational release factor 1##AF072934|MTRF1|9617|mitochondrial translational release factor 1##BC027731|MTRF1|9617|mitochondrial translational release factor 1##BC038427|MTRF1|9617|mitochondrial translational release factor 1##BC042196|MTRF1|9617|mitochondrial translational release factor 1##BC065496|MTRF1|9617|mitochondrial translational release factor 1##NM_004294|MTRF1|9617|mitochondrial translational release factor 1##AK294343|MTRF1|9617|mitochondrial translational release factor 1##AK299614|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AL136782|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK315589|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##BC022033|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##FJ150424|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_032138|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK091344|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15##BC066334|C13orf15|28984|chromosome 13 open reading frame 15##BC038706|C13orf15|28984|chromosome 13 open reading frame 15##AF036549|C13orf15|28984|chromosome 13 open reading frame 15	0.841895	CTCF.p2:-25:0.842
chr20	57226178	57226303	reg1019128.p3	6.079	+	BC101758 BC101760 AK074647 NM_153360 AK293299	-136342	-	AK124571 TSC_hg19_v1_chr20_+_57022525	-203748	+	TSC_hg19_v1_chr20_+_56964291 BC001712 AF086628 AF086629 AK298036 AK127252 AB529043 CU674842 BT009811	-261786	+	TSC_hg19_v1_chr20_+_57226338 AK316547 NM_001001433 NM_001134772 NM_001134773 NM_001204868 NM_003763 AK304867 AB209296	148	+	TSC_hg19_v1_chr20_+_57226873 BC019042 AF008935 AF008936 AF008937 BC073876 AF038897 AF428146 AK026970	751	+	NM_001204872 NM_001204873 AK297667 AK307771	37948	+	BC101758|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##BC101760|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK074647|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##NM_153360|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK293299|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK124571|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BC001712|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086628|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086629|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK298036|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK127252|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BT009811|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK316547|STX16|8675|syntaxin 16##NM_001001433|STX16|8675|syntaxin 16##NM_001134772|STX16|8675|syntaxin 16##NM_001134773|STX16|8675|syntaxin 16##NM_001204868|STX16|8675|syntaxin 16##NM_003763|STX16|8675|syntaxin 16##AK304867|STX16|8675|syntaxin 16##AB209296|STX16-NPEPL1|100534593|STX16-NPEPL1 readthrough (non-protein coding)##BC019042|STX16|8675|syntaxin 16##AF008935|STX16|8675|syntaxin 16##AF008936|STX16|8675|syntaxin 16##AF008937|STX16|8675|syntaxin 16##BC073876|STX16|8675|syntaxin 16##AF038897|STX16|8675|syntaxin 16##AF428146|STX16|8675|syntaxin 16##AK026970|STX16|8675|syntaxin 16##NM_001204872|NPEPL1|79716|aminopeptidase-like 1##NM_001204873|NPEPL1|79716|aminopeptidase-like 1##AK297667|NPEPL1|79716|aminopeptidase-like 1##AK307771|NPEPL1|79716|aminopeptidase-like 1	0.060304	
chr17	2740643	2740739	reg1019439.p1	6.078	+	AJ628446 AJ628447 NM_001100398 NM_015085 TSC_hg19_v1_chr17_+_2699761 CR627427 BC140870 BC140871	-40938	+	AK124640 TSC_hg19_v1_chr17_+_2680496	-60268	+	NM_015229 TSC_hg19_v1_chr17_-_2615039	-125704	-	BC106876 NM_014566 AB529301	226236	-	AB529300 BC069552 BC106735 BC106736 NM_002548	255598	-	BC069379 NM_003555 BC095520 AB529303	290210	-	AJ628446|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AJ628447|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_001100398|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015085|RAP1GAP2|23108|RAP1 GTPase activating protein 2##CR627427|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140870|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140871|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AK124640|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015229|KIAA0664|23277|KIAA0664##BC106876|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##NM_014566|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1##NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1##BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	0.0	
chr19	17494980	17495125	reg1025087.p1	6.078	+	CU691156 TSC_hg19_v1_chr19_-_17488155 AF348827 BC050365 BC056414 NM_031310 AF326591 AL834363 AK096030 AK313837	-6920	-	NM_001128855 NM_032620 NM_133644 AF360742 AF360743 AY078987 AY078988 AK298485 AK027606 AK291929 BC019261 TSC_hg19_v1_chr19_+_17448396 BC017207 AK311442 AF360744 DQ892217 DQ895413 CU676414 CU677863	-46680	+	NM_001195422 AK297953	-49253	+	CU689786 D28137 NM_004335 AK223124 AK291099 AK303593 TSC_hg19_v1_chr19_-_17516428 BC033873	21367	-	AK311380 AK055623 TSC_hg19_v1_chr19_+_17516630	21514	+	TSC_hg19_v1_chr19_+_17530855 AK057057 AK289487	35796	+	AF348827|PLVAP|83483|plasmalemma vesicle associated protein##BC050365|PLVAP|83483|plasmalemma vesicle associated protein##BC056414|PLVAP|83483|plasmalemma vesicle associated protein##NM_031310|PLVAP|83483|plasmalemma vesicle associated protein##AF326591|PLVAP|83483|plasmalemma vesicle associated protein##AL834363|PLVAP|83483|plasmalemma vesicle associated protein##AK096030|PLVAP|83483|plasmalemma vesicle associated protein##AK313837|PLVAP|83483|plasmalemma vesicle associated protein##NM_001128855|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_032620|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_133644|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360742|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360743|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AY078987|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AY078988|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK298485|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK027606|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK291929|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC019261|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC017207|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK311442|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360744|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##DQ892217|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##DQ895413|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_001195422|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK297953|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##D28137|BST2|684|bone marrow stromal cell antigen 2##NM_004335|BST2|684|bone marrow stromal cell antigen 2##AK223124|BST2|684|bone marrow stromal cell antigen 2##AK291099|BST2|684|bone marrow stromal cell antigen 2##AK303593|BST2|684|bone marrow stromal cell antigen 2##BC033873|BST2|684|bone marrow stromal cell antigen 2##AK311380|LOC100507535|100507535|uncharacterized LOC100507535##AK055623|LOC100507535|100507535|uncharacterized LOC100507535##AK057057|FAM125A|93343|family with sequence similarity 125, member A##AK289487|FAM125A|93343|family with sequence similarity 125, member A	0.983642	CTCF.p2:-10:0.984
chr2	23622512	23622693	reg1021930.p1	6.078	+	NM_052920	-14305	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2355673	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-2355703	-	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	527344	-	TSC_hg19_v1_chr2_+_24150144 BC037901	527555	+	TSC_hg19_v1_chr2_+_24163332 BC092484 AL832079 NM_181713 BC111997 BC093681 BC143298	540769	+	NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A##BC092484|UBXN2A|165324|UBX domain protein 2A##AL832079|UBXN2A|165324|UBX domain protein 2A##NM_181713|UBXN2A|165324|UBX domain protein 2A##BC111997|UBXN2A|165324|UBX domain protein 2A##BC093681|UBXN2A|165324|UBX domain protein 2A##BC143298|UBXN2A|165324|UBX domain protein 2A	0.997607	CTCF.p2:-4:0.998
chr8	130573464	130573619	reg1023747.p1	6.078	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1766758	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1825051	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1825216	+	AB042405 NM_031415	225592	-	BC003599 TSC_hg19_v1_chr8_-_130951934	378374	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	378465	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.164637	
chr8	26394387	26394511	reg1023763.p1	6.078	+	TSC_hg19_v1_chr8_+_26371546 AK092377 NM_001197293 AB370195	-22821	+	BC047515 TSC_hg19_v1_chr8_-_26371389 BC036489 AK055325 NM_007257	-23015	-	NM_004331 TSC_hg19_v1_chr8_+_26240583 AF452712 AK300286 AL132665 BC009603 AF067396 AF079221 AF060922 AK307195 AK300727 AF536326 AB004788 AK290213 BC001559 AB527613 BT019500 BT019501 CR456701 EU831983 EU832076	-153865	+	NM_001386 TSC_hg19_v1_chr8_+_26435441 BX647115 BC067109	40952	+	TSC_hg19_v1_chr8_+_26435468 AK223557 BC056408 D78013 BC010880 AK291287	41078	+	TSC_hg19_v1_chr8_+_26435604 U17279 AB370194 AB590733 BT006944 CU691152	41231	+	AK092377|DPYSL2|1808|dihydropyrimidinase-like 2##NM_001197293|DPYSL2|1808|dihydropyrimidinase-like 2##AB370195|DPYSL2|1808|dihydropyrimidinase-like 2##BC047515|PNMA2|10687|paraneoplastic antigen MA2##BC036489|PNMA2|10687|paraneoplastic antigen MA2##AK055325|PNMA2|10687|paraneoplastic antigen MA2##NM_007257|PNMA2|10687|paraneoplastic antigen MA2##NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##NM_001386|DPYSL2|1808|dihydropyrimidinase-like 2##BX647115|DPYSL2|1808|dihydropyrimidinase-like 2##BC067109|DPYSL2|1808|dihydropyrimidinase-like 2##AK223557|DPYSL2|1808|dihydropyrimidinase-like 2##BC056408|DPYSL2|1808|dihydropyrimidinase-like 2##D78013|DPYSL2|1808|dihydropyrimidinase-like 2##AK291287|DPYSL2|1808|dihydropyrimidinase-like 2##U17279|DPYSL2|1808|dihydropyrimidinase-like 2##AB370194|DPYSL2|1808|dihydropyrimidinase-like 2	0.014153	
chr9	100652374	100652486	reg1023461.p2	6.078	+	AB464529 TSC_hg19_v1_chr9_+_100616210	-36228	+	TSC_hg19_v1_chr9_+_100615409 NM_004473	-36959	+	TSC_hg19_v1_chr9_-_100459623 BC014965 NM_000380	-192764	-	TSC_hg19_v1_chr9_-_100684783 CU678254 DQ892983 DQ896231 AY189280 AF151053 AK309270 BC002863 AK000213 AK302701 NM_016481	32380	-	AF306683 AF306682 AL833094 AY255672 NM_197978 AY244805	48091	-	AF228713 AF322875 BC048324 AK292441 NM_018437	54687	-	NM_004473|FOXE1|2304|forkhead box E1 (thyroid transcription factor 2)##BC014965|XPA|7507|xeroderma pigmentosum, complementation group A##NM_000380|XPA|7507|xeroderma pigmentosum, complementation group A##DQ892983|C9orf156|51531|chromosome 9 open reading frame 156##DQ896231|C9orf156|51531|chromosome 9 open reading frame 156##AY189280|C9orf156|51531|chromosome 9 open reading frame 156##AF151053|C9orf156|51531|chromosome 9 open reading frame 156##AK309270|C9orf156|51531|chromosome 9 open reading frame 156##BC002863|C9orf156|51531|chromosome 9 open reading frame 156##AK000213|C9orf156|51531|chromosome 9 open reading frame 156##AK302701|C9orf156|51531|chromosome 9 open reading frame 156##NM_016481|C9orf156|51531|chromosome 9 open reading frame 156##AF306683|HEMGN|55363|hemogen##AF306682|HEMGN|55363|hemogen##AL833094|HEMGN|55363|hemogen##AY255672|HEMGN|55363|hemogen##NM_197978|HEMGN|55363|hemogen##AY244805|HEMGN|55363|hemogen##AF228713|HEMGN|55363|hemogen##AF322875|HEMGN|55363|hemogen##BC048324|HEMGN|55363|hemogen##AK292441|HEMGN|55363|hemogen##NM_018437|HEMGN|55363|hemogen	0.994487	CTCF.p2:-8:0.994
chr6	43969124	43969246	reg1023369.p2	6.077	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	-811	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-230315	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-230651	+	CR627460 TSC_hg19_v1_chr6_+_44094741	125513	+	TSC_hg19_v1_chr6_-_44095161 AK312086	125975	-	TSC_hg19_v1_chr6_-_44095190 NM_032111	126013	-	BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14##NM_032111|MRPL14|64928|mitochondrial ribosomal protein L14	0.012817	
chr6_apd_hap1	860860	860951	reg1021309.p1	6.077	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.57731	CTCF.p2:11:0.577
chr7	2606676	2606857	reg1017797.p1	6.077	+	AK092404 AX747526 TSC_hg19_v1_chr7_+_2598712 BC061518 AL136792 AK293372	-8019	+	TSC_hg19_v1_chr7_+_2598682 AK309646 BC043150	-8077	+	TSC_hg19_v1_chr7_+_2598649 AK302053	-8111	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	64837	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	64937	+	AK289723 AB075830 BC146753 NM_133463	112392	+	AK092404|IQCE|23288|IQ motif containing E##BC061518|IQCE|23288|IQ motif containing E##AL136792|IQCE|23288|IQ motif containing E##AK293372|IQCE|23288|IQ motif containing E##AK309646|IQCE|23288|IQ motif containing E##BC043150|IQCE|23288|IQ motif containing E##AK302053|IQCE|23288|IQ motif containing E##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1	0.06864	
chr11	69796275	69796418	reg1022056.p1	6.076	+	NM_005247	-162155	-	M17446 NM_002007	-206176	-	AF110400 AY358302 NM_005117	-277241	-	AY728143 NM_018043 TSC_hg19_v1_chr11_+_69924473	128094	+	NM_003824 TSC_hg19_v1_chr11_+_70049420 AK291005 AK293320 BC000334 X84709 U24231 BC025733 EU176185 AB587588 AY423721 BT006927 CR456738	253070	+	TSC_hg19_v1_chr11_+_70116795 NM_003626 NM_177423	320458	+	NM_005247|FGF3|2248|fibroblast growth factor 3##M17446|FGF4|2249|fibroblast growth factor 4##NM_002007|FGF4|2249|fibroblast growth factor 4##AF110400|FGF19|9965|fibroblast growth factor 19##AY358302|FGF19|9965|fibroblast growth factor 19##NM_005117|FGF19|9965|fibroblast growth factor 19##AY728143|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_018043|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_003824|FADD|8772|Fas (TNFRSF6)-associated via death domain##AK291005|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC000334|FADD|8772|Fas (TNFRSF6)-associated via death domain##X84709|FADD|8772|Fas (TNFRSF6)-associated via death domain##U24231|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC025733|FADD|8772|Fas (TNFRSF6)-associated via death domain##EU176185|FADD|8772|Fas (TNFRSF6)-associated via death domain##AY423721|FADD|8772|Fas (TNFRSF6)-associated via death domain##BT006927|FADD|8772|Fas (TNFRSF6)-associated via death domain##CR456738|FADD|8772|Fas (TNFRSF6)-associated via death domain##NM_003626|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##NM_177423|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1	0.138452	
chr15	32267161	32267272	reg1020556.p2	6.076	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-104273	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-104387	-	AJ430383 NM_130901	-319675	-	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	55527	+	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	640546	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	666698	+	AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)	0.584663	CTCF.p2:5:0.585
chr5	106695686	106695804	reg1020697.p2	6.076	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-3797264	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4101288	+	BC024591 NM_015216 AB463068	-4230471	+	AK308672 NM_001962 U26403	310845	-	TSC_hg19_v1_chr5_-_107717106 AK126722	1021385	-	BC063316 NM_001163315	1022053	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.047966	
chr6	57396794	57396934	reg1026762.p1	6.076	+	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	-214449	+	TSC_hg19_v1_chr6_-_57087081 AF161486 BC015021 NM_016277 CR749371 AK311123	-309793	-	AB034244 AK313796 NM_183227	-310634	-	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	890815	-	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	5599137	-	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	6633000	-	BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AF161486|RAB23|51715|RAB23, member RAS oncogene family##BC015021|RAB23|51715|RAB23, member RAS oncogene family##NM_016277|RAB23|51715|RAB23, member RAS oncogene family##CR749371|RAB23|51715|RAB23, member RAS oncogene family##AK311123|RAB23|51715|RAB23, member RAS oncogene family##AB034244|RAB23|51715|RAB23, member RAS oncogene family##AK313796|RAB23|51715|RAB23, member RAS oncogene family##NM_183227|RAB23|51715|RAB23, member RAS oncogene family##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	0.832153	CTCF.p2:-9:0.832
chr7	22021259	22021403	reg1027849.p1	6.076	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-35849	-	AJ320497 NM_003777	-438499	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-553007	+	AL833195 NM_012294	375190	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	518516	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	745492	+	AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)	0.016889	
chr8	112265514	112265629	reg1026440.p1	6.076	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-1278605	-	NM_001099743 NM_001099744	-1561552	-	AK290469 NM_001099745 NM_001099746	-1572338	-	AB114605 NM_198124	2123810	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	2183558	-	TSC_hg19_v1_chr8_-_116680208 AK304046	4414649	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.996555	CTCF.p2:-5:0.997
chr11	109870837	109870985	reg1020286.p1	6.075	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-578012	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-578068	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-1335097	+	AK095101 TSC_hg19_v1_chr11_+_109963524	92617	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	93219	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	296402	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.0	
chr1	55750590	55750687	reg1019112.p1	6.075	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-69554	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-69602	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-245414	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	1294381	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	1294492	-	AK312439 TSC_hg19_v1_chr1_-_57045216	1294579	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.019355	
chr6	15254331	15254438	reg1019579.p1	6.075	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-5271	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-5483	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-7972	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	408793	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	408906	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	874918	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.235476	CTCF.p2:-17:0.235
chr1	45075251	45075350	reg1020750.p1	6.074	+	AK056424 TSC_hg19_v1_chr1_+_44870926 BC034221 NM_018150	-204358	+	TSC_hg19_v1_chr1_-_44820942 AK026596	-254339	-	TSC_hg19_v1_chr1_-_44820938 AK290567 NM_024066	-254364	-	TSC_hg19_v1_chr1_+_45097700 AK296038 AK225180	22462	+	CR457348 AK026006 AK225405 TSC_hg19_v1_chr1_-_45140099 BC064520 NM_024587 AL832539	64787	-	AK296548 TSC_hg19_v1_chr1_-_45140143 BC007521	64848	-	AK056424|RNF220|55182|ring finger protein 220##BC034221|RNF220|55182|ring finger protein 220##NM_018150|RNF220|55182|ring finger protein 220##AK026596|ERI3|79033|ERI1 exoribonuclease family member 3##AK290567|ERI3|79033|ERI1 exoribonuclease family member 3##NM_024066|ERI3|79033|ERI1 exoribonuclease family member 3##AK296038|RNF220|55182|ring finger protein 220##AK225180|RNF220|55182|ring finger protein 220##CR457348|TMEM53|79639|transmembrane protein 53##AK026006|TMEM53|79639|transmembrane protein 53##AK225405|TMEM53|79639|transmembrane protein 53##BC064520|TMEM53|79639|transmembrane protein 53##NM_024587|TMEM53|79639|transmembrane protein 53##AL832539|TMEM53|79639|transmembrane protein 53##AK296548|TMEM53|79639|transmembrane protein 53##BC007521|TMEM53|79639|transmembrane protein 53	0.375795	CTCF.p2:0:0.276
chr19	18755297	18755396	reg1022775.p1	6.074	+	TSC_hg19_v1_chr19_+_18747837 AK001940 AK222656 AK294074 NM_018316 BC026319	-7512	+	TSC_hg19_v1_chr19_+_18723679 NM_012109 AK309384 AF186264 BC010446 EU831798 EU831875	-31630	+	TSC_hg19_v1_chr19_-_18717634 AF073515 NM_004750	-37700	-	TSC_hg19_v1_chr19_+_18794453 AK024089 AY040323 NM_001098482 NM_015321	39078	+	AY360171 TSC_hg19_v1_chr19_+_18794489 BC028050 AB527764 CU688378 DQ893310 DQ894228 AB014516	39177	+	U75488 TSC_hg19_v1_chr19_-_18888853	133444	-	AK001940|KLHL26|55295|kelch-like 26 (Drosophila)##AK222656|KLHL26|55295|kelch-like 26 (Drosophila)##AK294074|KLHL26|55295|kelch-like 26 (Drosophila)##NM_018316|KLHL26|55295|kelch-like 26 (Drosophila)##BC026319|KLHL26|55295|kelch-like 26 (Drosophila)##NM_012109|TMEM59L|25789|transmembrane protein 59-like##AK309384|TMEM59L|25789|transmembrane protein 59-like##AF186264|TMEM59L|25789|transmembrane protein 59-like##BC010446|TMEM59L|25789|transmembrane protein 59-like##EU831798|TMEM59L|25789|transmembrane protein 59-like##EU831875|TMEM59L|25789|transmembrane protein 59-like##AF073515|CRLF1|9244|cytokine receptor-like factor 1##NM_004750|CRLF1|9244|cytokine receptor-like factor 1##AK024089|CRTC1|23373|CREB regulated transcription coactivator 1##AY040323|CRTC1|23373|CREB regulated transcription coactivator 1##NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1##NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1##AY360171|CRTC1|23373|CREB regulated transcription coactivator 1##BC028050|CRTC1|23373|CREB regulated transcription coactivator 1##DQ893310|CRTC1|23373|CREB regulated transcription coactivator 1##DQ894228|CRTC1|23373|CREB regulated transcription coactivator 1##AB014516|CRTC1|23373|CREB regulated transcription coactivator 1	0.750911	CTCF.p2:6:0.751
chr20	38458046	38458165	reg1024829.p1	6.074	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-867116	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-903037	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-903116	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	859772	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1199389	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1199559	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.755248	CTCF.p2:-12:0.755
chr12	105184402	105184583	reg1023986.p2	6.073	+	TSC_hg19_v1_chr12_+_105153261 AF131762	-31215	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-333405	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-333684	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	137771	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	195598	+	TSC_hg19_v1_chr12_+_105380115 BC032326 CU689336 DQ891649 DQ894838	195629	+	AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45##BC032326|C12orf45|121053|chromosome 12 open reading frame 45##DQ891649|C12orf45|121053|chromosome 12 open reading frame 45##DQ894838|C12orf45|121053|chromosome 12 open reading frame 45	0.0	
chr7	28961509	28961625	reg1012149.p1	6.073	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	-235884	+	AK292916 TSC_hg19_v1_chr7_+_28530784	-430802	+	L05911 NM_004904	-486334	+	CU690330 TSC_hg19_v1_chr7_-_28997732	36130	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	36362	-	AK293803 NM_014817 TSC_hg19_v1_chr7_-_28998036	36465	-	L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5##AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats##NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats	0.990806	CTCF.p2:9:0.991
chr10	31996748	31996909	reg1018518.p2	6.072	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-386739	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-388695	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-388871	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	220896	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	220957	-	TSC_hg19_v1_chr10_-_32344938 AB462413	348104	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.0	
chr12	76210793	76210908	reg1021045.p1	6.072	+	BC005225 TSC_hg19_v1_chr12_-_75905414 NM_007043	-305431	-	BC033887 TSC_hg19_v1_chr12_-_75905393 BC014034 BC026107	-305455	-	AK022133 TSC_hg19_v1_chr12_-_75905382 BC016778 U55766	-305465	-	AF220656 TSC_hg19_v1_chr12_-_76424608	213697	-	TSC_hg19_v1_chr12_-_76425369 BC126425 BC130427 BC110820 U92983 BC018929	214440	-	TSC_hg19_v1_chr12_-_76425376 AK304224 AB587598 NM_007350 Z50194	214677	-	BC005225|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##NM_007043|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC033887|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC014034|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC026107|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK022133|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC016778|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##U55766|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AF220656|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC126425|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC130427|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC110820|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##U92983|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC018929|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##AK304224|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##NM_007350|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##Z50194|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1	0.599649	CTCF.p2:-18:0.600
chr15	31093479	31093576	reg1026378.p1	6.072	+	BC105788 NM_001039841	-174649	+	TSC_hg19_v1_chr15_+_30918372 BC071990	-175141	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-407815	-	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	102547	+	CR936734 CR936727 TSC_hg19_v1_chr15_+_31196114 AB023235	102590	+	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	190240	-	BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936734|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936727|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AB023235|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10	0.066658	
chr8	110732578	110732720	reg1024536.p1	6.072	+	NM_001099743 NM_001099744	-28630	-	AK290469 NM_001099745 NM_001099746	-39416	-	AL713645 AB195676 AB195677 AB195678 NM_001099747 NM_001099748 NM_001099749 NM_001099750 NM_017786	-71580	-	BC028739 AK313469 AF167082 NM_014379 AK297393	254317	-	AB114605 NM_198124	3656732	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	3716480	-	NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AL713645|SYBU|55638|syntabulin (syntaxin-interacting)##AB195676|SYBU|55638|syntabulin (syntaxin-interacting)##AB195677|SYBU|55638|syntabulin (syntaxin-interacting)##AB195678|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)##NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3	0.780631	CTCF.p2:8:0.781
chr15	66339239	66339352	reg1022431.p1	6.071	+	TSC_hg19_v1_chr15_-_66321664 AK054827	-17602	-	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	-177448	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-254702	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	206782	-	NM_133375 AK295392 BC022089	246350	+	TSC_hg19_v1_chr15_+_66585931 NM_001143688 AK095407	246604	+	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	0.572194	CTCF.p2:-8:0.572
chr2	9695773	9695931	reg1022397.p1	6.071	+	TSC_hg19_v1_chr2_-_9695874 U69611 U69612	-2	-	AY422721 TSC_hg19_v1_chr2_-_9695771 BC136783	-77	-	TSC_hg19_v1_chr2_+_9614657 BC019061 BC067865 BC111025 NM_001039613 BC059410 AK291984 BC039709 AK092982 AK297648	-81183	+	TSC_hg19_v1_chr2_-_9695883 AK289829	31	-	TSC_hg19_v1_chr2_-_9695885 U86755 U92649 BC062687 GQ402545 NM_003183 BC146658	67	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	74761	-	U69611|ADAM17|6868|ADAM metallopeptidase domain 17##U69612|ADAM17|6868|ADAM metallopeptidase domain 17##AY422721|ADAM17|6868|ADAM metallopeptidase domain 17##BC136783|ADAM17|6868|ADAM metallopeptidase domain 17##BC019061|IAH1|285148|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)##BC067865|IAH1|285148|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)##BC111025|IAH1|285148|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)##NM_001039613|IAH1|285148|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)##BC059410|IAH1|285148|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)##AK291984|IAH1|285148|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)##BC039709|IAH1|285148|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)##AK092982|IAH1|285148|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)##AK297648|IAH1|285148|isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae)##AK289829|ADAM17|6868|ADAM metallopeptidase domain 17##U86755|ADAM17|6868|ADAM metallopeptidase domain 17##U92649|ADAM17|6868|ADAM metallopeptidase domain 17##BC062687|ADAM17|6868|ADAM metallopeptidase domain 17##GQ402545|ADAM17|6868|ADAM metallopeptidase domain 17##NM_003183|ADAM17|6868|ADAM metallopeptidase domain 17##BC146658|ADAM17|6868|ADAM metallopeptidase domain 17##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	0.160517	
chr3	50923033	50923175	reg1026772.p1	6.071	+	AY254099 NM_004947 AY145303	-210422	+	TSC_hg19_v1_chr3_+_50654932 AK313565 U43784 AB528893 EU832627 EU832702 CU675717 AB451303 AB451434	-268172	+	BC001662 BC010407 TSC_hg19_v1_chr3_+_50654611 BC007591 U09578	-268477	+	NM_006010 TSC_hg19_v1_chr3_+_51422691	499587	+	TSC_hg19_v1_chr3_+_51422721 BC113588 BC113590 AK292243 BC007282 BT007110 EU832655 EU832733 BC033055	499677	+	NM_013286 TSC_hg19_v1_chr3_+_51428706	505598	+	AY254099|DOCK3|1795|dedicator of cytokinesis 3##NM_004947|DOCK3|1795|dedicator of cytokinesis 3##AY145303|DOCK3|1795|dedicator of cytokinesis 3##AK313565|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U43784|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832627|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832702|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451303|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451434|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC001662|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC010407|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC007591|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U09578|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##NM_006010|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113588|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113590|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AK292243|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC007282|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BT007110|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832655|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832733|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC033055|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##NM_013286|RBM15B|29890|RNA binding motif protein 15B	0.0	
chr8	28627293	28627412	reg1019413.p1	6.071	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	-68202	+	TSC_hg19_v1_chr8_+_28559032 AB011091	-68277	+	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	-275587	+	TSC_hg19_v1_chr8_-_28747454 BC016687 AK225072 AK304525 AK298468 NM_001172562 BC025267 AK300593 AK295977 AK001733 AK225530	120108	-	NM_001145159 NM_018250	120345	-	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	120565	+	AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3##AB011091|EXTL3|2137|exostoses (multiple)-like 3##NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##BC016687|INTS9|55756|integrator complex subunit 9##AK225072|INTS9|55756|integrator complex subunit 9##AK304525|INTS9|55756|integrator complex subunit 9##AK298468|INTS9|55756|integrator complex subunit 9##NM_001172562|INTS9|55756|integrator complex subunit 9##BC025267|INTS9|55756|integrator complex subunit 9##AK300593|INTS9|55756|integrator complex subunit 9##AK295977|INTS9|55756|integrator complex subunit 9##AK001733|INTS9|55756|integrator complex subunit 9##AK225530|INTS9|55756|integrator complex subunit 9##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1	0.0	
chr12	25272101	25272227	reg1021439.p2	6.070	+	TSC_hg19_v1_chr12_+_25205520 BC029391 AK303103 AK303256 BC126417 BC144164 BC144165 BC144170	-66584	+	NM_001204126 NM_001204127 NM_006152	-66984	+	BC035880 NM_001101339 BC046192 BC062789	-121752	-	BC028415 AK297998 AK302235 AK301763 AK093102 AX747924 BC031047 BC047415 BC057795 NM_001082972 NM_001082973 NM_001204101 NM_001204102 NM_018272 AK304602	75899	-	TSC_hg19_v1_chr12_+_25348156 AK057730 NM_001001660	75987	+	AK094491 TSC_hg19_v1_chr12_+_25348215 BC100276 BC071769	76042	+	BC029391|LRMP|4033|lymphoid-restricted membrane protein##AK303103|LRMP|4033|lymphoid-restricted membrane protein##AK303256|LRMP|4033|lymphoid-restricted membrane protein##BC126417|LRMP|4033|lymphoid-restricted membrane protein##BC144164|LRMP|4033|lymphoid-restricted membrane protein##BC144165|LRMP|4033|lymphoid-restricted membrane protein##BC144170|LRMP|4033|lymphoid-restricted membrane protein##NM_001204126|LRMP|4033|lymphoid-restricted membrane protein##NM_001204127|LRMP|4033|lymphoid-restricted membrane protein##NM_006152|LRMP|4033|lymphoid-restricted membrane protein##BC035880|C12orf77|196415|chromosome 12 open reading frame 77##NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77##BC046192|C12orf77|196415|chromosome 12 open reading frame 77##BC062789|C12orf77|196415|chromosome 12 open reading frame 77##BC028415|CASC1|55259|cancer susceptibility candidate 1##AK297998|CASC1|55259|cancer susceptibility candidate 1##AK302235|CASC1|55259|cancer susceptibility candidate 1##AK301763|CASC1|55259|cancer susceptibility candidate 1##AK093102|CASC1|55259|cancer susceptibility candidate 1##BC031047|CASC1|55259|cancer susceptibility candidate 1##BC047415|CASC1|55259|cancer susceptibility candidate 1##BC057795|CASC1|55259|cancer susceptibility candidate 1##NM_001082972|CASC1|55259|cancer susceptibility candidate 1##NM_001082973|CASC1|55259|cancer susceptibility candidate 1##NM_001204101|CASC1|55259|cancer susceptibility candidate 1##NM_001204102|CASC1|55259|cancer susceptibility candidate 1##NM_018272|CASC1|55259|cancer susceptibility candidate 1##AK304602|CASC1|55259|cancer susceptibility candidate 1##AK057730|LYRM5|144363|LYR motif containing 5##NM_001001660|LYRM5|144363|LYR motif containing 5##BC100276|LYRM5|144363|LYR motif containing 5##BC071769|LYRM5|144363|LYR motif containing 5	0.0	
chr16	73561188	73561324	reg1023880.p1	6.070	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-468670	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-479035	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-569551	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	769437	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	769515	+	TSC_hg19_v1_chr16_-_74401811 AK124154	840556	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.760794	CTCF.p2:30:0.761
chr22	33219140	33219270	reg1023330.p1	6.070	+	BC014277 TSC_hg19_v1_chr22_+_33197759	-21453	+	TSC_hg19_v1_chr22_+_33197690 AK311702 AK314871 AK298126 BC013086 U14394 AX801509 U02571 S78453 U67195	-21511	+	NM_000362	-22404	+	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	183521	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	235150	-	AJ007583 AB011181 NM_004737 NM_133642	1097165	-	BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK314871|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK298126|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC013086|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U14394|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U02571|TIMP3|7078|TIMP metallopeptidase inhibitor 3##S78453|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U67195|TIMP3|7078|TIMP metallopeptidase inhibitor 3##NM_000362|TIMP3|7078|TIMP metallopeptidase inhibitor 3##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase	0.907291	CTCF.p2:0:0.907
chr2	63771297	63771405	reg1020529.p2	6.070	+	NM_014562 TSC_hg19_v1_chr2_+_63277964 AK095680 AK297308 BC007621	-493386	+	NM_001199770	-494160	+	BC029477 NM_001142614	-837321	+	TSC_hg19_v1_chr2_-_63815560 AK310290	44189	-	TSC_hg19_v1_chr2_-_63815583 BX538331 AK055030 AL833623	44266	-	NM_005917	44391	+	NM_014562|OTX1|5013|orthodenticle homeobox 1##AK095680|OTX1|5013|orthodenticle homeobox 1##AK297308|OTX1|5013|orthodenticle homeobox 1##BC007621|OTX1|5013|orthodenticle homeobox 1##NM_001199770|OTX1|5013|orthodenticle homeobox 1##BC029477|EHBP1|23301|EH domain binding protein 1##NM_001142614|EHBP1|23301|EH domain binding protein 1##AK310290|WDPCP|51057|WD repeat containing planar cell polarity effector##BX538331|WDPCP|51057|WD repeat containing planar cell polarity effector##AK055030|WDPCP|51057|WD repeat containing planar cell polarity effector##AL833623|WDPCP|51057|WD repeat containing planar cell polarity effector##NM_005917|MDH1|4190|malate dehydrogenase 1, NAD (soluble)	0.526996	CTCF.p2:1:0.527
chr5	53607747	53607873	reg1028639.p1	6.070	+	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	-1408	-	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	-1485	-	TSC_hg19_v1_chr5_+_52856474 AF020351 AK307973 CU675075	-751324	+	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	143714	+	TSC_hg19_v1_chr5_+_53813588 AK304195 NM_001145427 BC060791 BC067860 NM_001102575 NM_052870	205735	+	TSC_hg19_v1_chr5_+_53813656 BC117218 BC117220	205863	+	AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AF020351|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK307973|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3##AK304195|SNX18|112574|sorting nexin 18##NM_001145427|SNX18|112574|sorting nexin 18##BC060791|SNX18|112574|sorting nexin 18##BC067860|SNX18|112574|sorting nexin 18##NM_001102575|SNX18|112574|sorting nexin 18##NM_052870|SNX18|112574|sorting nexin 18##BC117218|SNX18|112574|sorting nexin 18##BC117220|SNX18|112574|sorting nexin 18	0.342393	CTCF.p2:14:0.323
chr5	89140547	89140642	reg1023550.p1	6.069	+	AL833268 AL833274 NM_001131005 NM_001193347	-940700	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-955330	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-955474	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	564945	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	629588	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	629984	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr7	50682606	50682711	reg1023311.p1	6.069	+	M88700 TSC_hg19_v1_chr7_-_50633103 AK298392 NM_001082971	-49561	-	AJ310724 BC000485 BC008366 M76180 AK298321 NM_000790 NM_001242886 NM_001242887 NM_001242888 NM_001242889 NM_001242890 TSC_hg19_v1_chr7_-_50628769	-53899	-	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	-164604	-	NM_001001550 U66065 U69276	90339	-	AF000017 AB000731 AF001534 NM_001001549 NM_005311 U34355	117375	-	D86962 TSC_hg19_v1_chr7_-_50860699	178031	-	M88700|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298392|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001082971|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AJ310724|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC000485|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC008366|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##M76180|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298321|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_000790|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242886|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242887|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242888|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242889|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242890|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1##NM_001001550|GRB10|2887|growth factor receptor-bound protein 10##U66065|GRB10|2887|growth factor receptor-bound protein 10##U69276|GRB10|2887|growth factor receptor-bound protein 10##AF000017|GRB10|2887|growth factor receptor-bound protein 10##AB000731|GRB10|2887|growth factor receptor-bound protein 10##AF001534|GRB10|2887|growth factor receptor-bound protein 10##NM_001001549|GRB10|2887|growth factor receptor-bound protein 10##NM_005311|GRB10|2887|growth factor receptor-bound protein 10##U34355|GRB10|2887|growth factor receptor-bound protein 10##D86962|GRB10|2887|growth factor receptor-bound protein 10	0.0	
chr9	123111249	123111365	reg1023218.p1	6.069	+	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	-979649	-	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-2644620	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	-2644693	+	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	231046	-	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	365410	-	AF176698 TSC_hg19_v1_chr9_-_123555558	444238	-	BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9##AF176698|FBXW2|26190|F-box and WD repeat domain containing 2	0.145055	
chr16	70301541	70301673	reg1025312.p1	6.068	+	TSC_hg19_v1_chr16_-_70285844 BC052252 NM_058219 BC039194	-15774	-	AF448856 BC039068 NM_173619 AL833339 AK074773 CU687316 BC062573	-93503	+	TSC_hg19_v1_chr16_+_70148247 AK292502 AK302987	-153360	+	BC011451 TSC_hg19_v1_chr16_-_70323364 AK299098	21760	-	TSC_hg19_v1_chr16_-_70323413 AK222824 AK225116 AK307782 D32050 NM_001605	21804	-	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	31469	+	BC052252|EXOSC6|118460|exosome component 6##NM_058219|EXOSC6|118460|exosome component 6##AF448856|CLEC18C|283971|C-type lectin domain family 18, member C##BC039068|CLEC18C|283971|C-type lectin domain family 18, member C##NM_173619|CLEC18C|283971|C-type lectin domain family 18, member C##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##BC062573|CLEC18C|283971|C-type lectin domain family 18, member C##AK292502|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##AK302987|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##BC011451|AARS|16|alanyl-tRNA synthetase##AK299098|AARS|16|alanyl-tRNA synthetase##AK222824|AARS|16|alanyl-tRNA synthetase##AK225116|AARS|16|alanyl-tRNA synthetase##AK307782|AARS|16|alanyl-tRNA synthetase##D32050|AARS|16|alanyl-tRNA synthetase##NM_001605|AARS|16|alanyl-tRNA synthetase##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	0.428198	CTCF.p2:15:0.428
chr16	70517484	70517664	reg1024466.p1	6.068	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	-14734	+	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	-29075	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	-44593	-	BC027726 AB088369 BC128144 BC128145 AK022874 BC072438 TSC_hg19_v1_chr16_-_70557452 BX648010 AK293235 AK297557 AK096557 NM_001195139 NM_015386	39870	-	TSC_hg19_v1_chr16_+_70557713 NM_012426 AK291768	40126	+	BC009780 TSC_hg19_v1_chr16_+_70557724	40150	+	AK096727|FUK|197258|fucokinase##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##BC027726|COG4|25839|component of oligomeric golgi complex 4##AB088369|COG4|25839|component of oligomeric golgi complex 4##BC128144|COG4|25839|component of oligomeric golgi complex 4##BC128145|COG4|25839|component of oligomeric golgi complex 4##AK022874|COG4|25839|component of oligomeric golgi complex 4##BC072438|COG4|25839|component of oligomeric golgi complex 4##BX648010|COG4|25839|component of oligomeric golgi complex 4##AK293235|COG4|25839|component of oligomeric golgi complex 4##AK297557|COG4|25839|component of oligomeric golgi complex 4##AK096557|COG4|25839|component of oligomeric golgi complex 4##NM_001195139|COG4|25839|component of oligomeric golgi complex 4##NM_015386|COG4|25839|component of oligomeric golgi complex 4##NM_012426|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##AK291768|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##BC009780|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa	0.0	
chr9	71122489	71122635	reg1022965.p1	6.068	+	BC033073 NM_021965	-150748	+	AY344641 AY344642 NM_199135 BC137365 BC137366 EU446685 BC103887	-204738	+	NM_201453 AK293173 AY344633 AK297912 BC069006 BC082271 AF265442 CU688346	-265670	+	DQ890797 DQ893952 BC029780 NM_153237 TSC_hg19_v1_chr9_-_71155800	33203	-	TSC_hg19_v1_chr9_+_71320206 AK295587 AK292734 NM_003558	197814	+	TSC_hg19_v1_chr9_+_71394980 NM_138333 BC013062 AK126379 AK304099	272389	+	BC033073|PGM5|5239|phosphoglucomutase 5##NM_021965|PGM5|5239|phosphoglucomutase 5##AY344641|FOXD4L3|286380|forkhead box D4-like 3##AY344642|FOXD4L3|286380|forkhead box D4-like 3##NM_199135|FOXD4L3|286380|forkhead box D4-like 3##BC137365|FOXD4L6|653404|forkhead box D4-like 6##BC137366|FOXD4L6|653404|forkhead box D4-like 6##EU446685|FOXD4L6|653404|forkhead box D4-like 6##BC103887|FOXD4L6|653404|forkhead box D4-like 6##NM_201453|CBWD3|445571|COBW domain containing 3##AK293173|CBWD6|644019|COBW domain containing 6##AY344633|CBWD3|445571|COBW domain containing 3##AK297912|CBWD3|445571|COBW domain containing 3##BC069006|CBWD6|644019|COBW domain containing 6##BC082271|CBWD5|220869|COBW domain containing 5##AF265442|CBWD5|220869|COBW domain containing 5##DQ890797|C9orf71|169693|chromosome 9 open reading frame 71##DQ893952|C9orf71|169693|chromosome 9 open reading frame 71##BC029780|C9orf71|169693|chromosome 9 open reading frame 71##NM_153237|C9orf71|169693|chromosome 9 open reading frame 71##AK295587|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##AK292734|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_003558|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_138333|FAM122A|116224|family with sequence similarity 122A##BC013062|FAM122A|116224|family with sequence similarity 122A##AK126379|FAM122A|116224|family with sequence similarity 122A	0.718533	CTCF.p2:3:0.719
chr19	56907668	56907762	reg1024963.p2	6.067	+	TSC_hg19_v1_chr19_-_56904904 AK055489 NM_144690 AK299036 BC056238 AK316028	-2823	-	BX647919 AK097128 TSC_hg19_v1_chr19_+_56879704 AL833621 BC064603 BC089419	-27999	+	BC002636 NM_024303 AK098700	-168047	-	NM_001159860	7667	+	NM_152478 TSC_hg19_v1_chr19_+_56915703 AK055592 NM_001159861	7990	+	AK096513 AK056508 CR936605 BX647401 NM_022103	81018	-	AK055489|ZNF582|147948|zinc finger protein 582##NM_144690|ZNF582|147948|zinc finger protein 582##AK299036|ZNF582|147948|zinc finger protein 582##BC056238|ZNF582|147948|zinc finger protein 582##AK316028|ZNF582|147948|zinc finger protein 582##BX647919|ZNF542|147947|zinc finger protein 542##AK097128|ZNF542|147947|zinc finger protein 542##AL833621|ZNF542|147947|zinc finger protein 542##BC064603|ZNF542|147947|zinc finger protein 542##BC089419|ZNF542|147947|zinc finger protein 542##BC002636|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_024303|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##AK098700|ZSCAN5A|79149|zinc finger and SCAN domain containing 5A##NM_001159860|ZNF583|147949|zinc finger protein 583##NM_152478|ZNF583|147949|zinc finger protein 583##AK055592|ZNF583|147949|zinc finger protein 583##NM_001159861|ZNF583|147949|zinc finger protein 583##AK096513|ZNF667|63934|zinc finger protein 667##AK056508|ZNF667|63934|zinc finger protein 667##CR936605|ZNF667|63934|zinc finger protein 667##BX647401|ZNF667|63934|zinc finger protein 667##NM_022103|ZNF667|63934|zinc finger protein 667	0.830068	CTCF.p2:-1:0.830
chr1	160575201	160575314	reg1025244.p1	6.066	+	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	-25969	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	-26010	-	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	-82228	-	AK314244 NM_003037 BC012602	41806	-	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	106329	-	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	133807	+	AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7	0.236368	CTCF.p2:-8:0.236
chr17	30830716	30830888	reg1021746.p2	6.066	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-16042	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-16205	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-16731	+	CU688936 AB385376 AB018270 BC146763 NM_015194	373093	-	TSC_hg19_v1_chr17_-_31204141 AK127942	373321	-	TSC_hg19_v1_chr17_-_31204196 BC030602	373411	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.0	
chr16	2721331	2721460	reg1022635.p1	6.065	+	AK096394 TSC_hg19_v1_chr16_+_2653445 BC093998 BC111952 AK291606 BC062576 BC036664 BC056242 BC105289 BC080650	-67978	+	BC033494 TSC_hg19_v1_chr16_+_2588066 AB463382 DQ892297 DQ895496 EU832784 GQ129441 CU689632 CR536517 BC040324	-133288	+	AK131060 AK222581 AK293900 TSC_hg19_v1_chr16_+_2588021 AF017995 Y15056	-133360	+	BC063714 TSC_hg19_v1_chr16_-_2723400 AK091794 AX747190 BC043252	2010	-	TSC_hg19_v1_chr16_+_2732524 NM_018992 AK000047	11104	+	TSC_hg19_v1_chr16_+_2732528 BC007314	11196	+	AK096394|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC093998|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC111952|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##AK291606|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC062576|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC036664|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC056242|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC105289|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC080650|LOC652276|652276|potassium channel tetramerisation domain containing 5 pseudogene##BC033494|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##DQ892297|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##DQ895496|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##EU832784|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##GQ129441|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##CR536517|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##BC040324|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK131060|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK222581|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK293900|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AF017995|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##Y15056|PDPK1|5170|3-phosphoinositide dependent protein kinase-1##AK091794|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##AX747190|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##BC043252|ERVK13-1|100507321|endogenous retrovirus group K13, member 1##NM_018992|KCTD5|54442|potassium channel tetramerisation domain containing 5##AK000047|KCTD5|54442|potassium channel tetramerisation domain containing 5##BC007314|KCTD5|54442|potassium channel tetramerisation domain containing 5	0.399352	CTCF.p2:1:0.399
chr9	92904999	92905117	reg1023396.p1	6.065	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-685077	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-792051	-	BC054500 NM_001142287 NM_006378	-810448	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	500061	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	658978	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	659009	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.999836	CTCF.p2:-2:1.000
chrX	8291526	8291635	reg1025904.p1	6.065	+	AF167079 NM_016378	-152273	-	AK304586 TSC_hg19_v1_chrX_-_7895766 NM_001142389 NM_001172672	-395809	-	AK289888 U03886 NM_004650 BC020746	-396130	-	AF167078 AF167080 NM_001001888	141290	+	X60299 TSC_hg19_v1_chrX_-_8700155	408563	-	TSC_hg19_v1_chrX_-_8700193 BC137426 BC137427 M97252 NM_000216 S60085	408627	-	AF167079|VCX2|51480|variable charge, X-linked 2##NM_016378|VCX2|51480|variable charge, X-linked 2##AK304586|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001142389|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001172672|PNPLA4|8228|patatin-like phospholipase domain containing 4##AK289888|PNPLA4|8228|patatin-like phospholipase domain containing 4##U03886|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_004650|PNPLA4|8228|patatin-like phospholipase domain containing 4##BC020746|PNPLA4|8228|patatin-like phospholipase domain containing 4##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167080|VCX3B|425054|variable charge, X-linked 3B##NM_001001888|VCX3B|425054|variable charge, X-linked 3B##X60299|KAL1|3730|Kallmann syndrome 1 sequence##BC137426|KAL1|3730|Kallmann syndrome 1 sequence##BC137427|KAL1|3730|Kallmann syndrome 1 sequence##M97252|KAL1|3730|Kallmann syndrome 1 sequence##NM_000216|KAL1|3730|Kallmann syndrome 1 sequence##S60085|KAL1|3730|Kallmann syndrome 1 sequence	0.99973	CTCF.p2:13:1.000
chr1	153211163	153211315	reg1023920.p1	6.064	+	NM_001195571	-21180	+	NM_001010857 BC130507 BC130511 BC087854	-35298	+	BC130455 BC133041 NM_001014291	-87813	-	BC108290 NM_000427	20939	+	BC128114 BC128115 BC069741 BC069798 BC069801 AY035376 NM_052891	71940	-	AY035377 NM_020393 AF242518	109793	-	NM_001195571|PRR9|574414|proline rich 9##NM_001010857|LELP1|149018|late cornified envelope-like proline-rich 1##BC130507|LELP1|149018|late cornified envelope-like proline-rich 1##BC130511|LELP1|149018|late cornified envelope-like proline-rich 1##BC087854|LELP1|149018|late cornified envelope-like proline-rich 1##BC130455|SPRR2G|6706|small proline-rich protein 2G##BC133041|SPRR2G|6706|small proline-rich protein 2G##NM_001014291|SPRR2G|6706|small proline-rich protein 2G##BC108290|LOR|4014|loricrin##NM_000427|LOR|4014|loricrin##BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3##BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3##NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035377|PGLYRP4|57115|peptidoglycan recognition protein 4##NM_020393|PGLYRP4|57115|peptidoglycan recognition protein 4##AF242518|PGLYRP4|57115|peptidoglycan recognition protein 4	0.0	
chr17	77890078	77890190	reg1021210.p1	6.064	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	-76992	-	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-119227	-	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	-138153	+	BC044939 TSC_hg19_v1_chr17_+_77893233	3065	+	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	119468	-	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	120314	+	AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40	0.043547	
chr7	101335301	101335482	reg1021548.p1	6.064	+	BC002778 NM_138403	-62816	-	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	-329174	+	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	-370353	-	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	123818	+	M74099 NM_181552	125490	+	TSC_hg19_v1_chr7_+_101928390 NM_020979	593006	+	BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_020979|SH2B2|10603|SH2B adaptor protein 2	0.0	
chrX	119384631	119384747	reg1022470.p1	6.064	+	TSC_hg19_v1_chrX_+_119384666 BC042753 NM_006777 NM_001184742 BX538016 AL833604 AK312321 BX538101	-103	+	BC113730 BC113732 TSC_hg19_v1_chrX_-_119379092 BC022359 AK093895 AX748357	-5611	-	AL590526 NM_001099685 NM_032498 AF317219 AL590524 AK058125 BC021719 AB464156 DQ890992 DQ894169	-92128	+	TSC_hg19_v1_chrX_+_119384690 AX721150	1	+	TSC_hg19_v1_chrX_-_119445289 AK289684 BC047054	60596	-	TSC_hg19_v1_chrX_-_119445320 AF450484 AK056403 NM_001104544 NM_001104545 NM_017938	60664	-	BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33##NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33##NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33##BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33##AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33##AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33##BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33##BC113730|NKAPP1|158801|NFKB activating protein pseudogene 1##BC113732|NKAPP1|158801|NFKB activating protein pseudogene 1##BC022359|NKAPP1|158801|NFKB activating protein pseudogene 1##AK093895|NKAPP1|158801|NFKB activating protein pseudogene 1##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##AK289684|FAM70A|55026|family with sequence similarity 70, member A##BC047054|FAM70A|55026|family with sequence similarity 70, member A##AF450484|FAM70A|55026|family with sequence similarity 70, member A##AK056403|FAM70A|55026|family with sequence similarity 70, member A##NM_001104544|FAM70A|55026|family with sequence similarity 70, member A##NM_001104545|FAM70A|55026|family with sequence similarity 70, member A##NM_017938|FAM70A|55026|family with sequence similarity 70, member A	0.532288	CTCF.p2:-43:0.516
chr16	28874676	28874844	reg1023113.p1	6.063	+	AK055104 TSC_hg19_v1_chr16_+_28858064	-16724	+	TSC_hg19_v1_chr16_-_28857657 BC010041 S75463 NM_003321	-17078	-	L38995 X84694 CU674798 TSC_hg19_v1_chr16_-_28857620 BC001633	-17149	-	TSC_hg19_v1_chr16_+_28874866 AK298569	107	+	NM_001145795 NM_001145796 NM_001145797 TSC_hg19_v1_chr16_+_28875160 AK297080	359	+	TSC_hg19_v1_chr16_+_28875181 AF227967 AF227968 AF227969 AK290332 NM_001145812 AL713760 NM_015503	487	+	AK055104|SH2B1|25970|SH2B adaptor protein 1##BC010041|TUFM|7284|Tu translation elongation factor, mitochondrial##S75463|TUFM|7284|Tu translation elongation factor, mitochondrial##NM_003321|TUFM|7284|Tu translation elongation factor, mitochondrial##L38995|TUFM|7284|Tu translation elongation factor, mitochondrial##X84694|TUFM|7284|Tu translation elongation factor, mitochondrial##BC001633|TUFM|7284|Tu translation elongation factor, mitochondrial##AK298569|SH2B1|25970|SH2B adaptor protein 1##NM_001145795|SH2B1|25970|SH2B adaptor protein 1##NM_001145796|SH2B1|25970|SH2B adaptor protein 1##NM_001145797|SH2B1|25970|SH2B adaptor protein 1##AK297080|SH2B1|25970|SH2B adaptor protein 1##AF227967|SH2B1|25970|SH2B adaptor protein 1##AF227968|SH2B1|25970|SH2B adaptor protein 1##AF227969|SH2B1|25970|SH2B adaptor protein 1##AK290332|SH2B1|25970|SH2B adaptor protein 1##NM_001145812|SH2B1|25970|SH2B adaptor protein 1##AL713760|SH2B1|25970|SH2B adaptor protein 1##NM_015503|SH2B1|25970|SH2B adaptor protein 1	0.0	
chr2	48816439	48816558	reg1026304.p1	6.063	+	NM_001198594 BC101772 BC101774 BC143520 AF255310 BC121063 BC121064 AY026319	-8750	+	AF026169 NM_172311	-20340	+	TSC_hg19_v1_chr2_+_48757357 AK314464 NM_001198595 NM_006873 CR936807	-59173	+	AK302220 NM_001193487 NM_006872 BC025991 AK223350 AF106857 CU693090 DQ891566 DQ894756 BC064585	28477	+	S57793 M63108 M73746 AK123498 NM_000233	166346	-	AY429104 BC096831 X68044 JN003607 BC118548 BC125270 M65085 S59900 M95489 AK292562 AK310367 NM_000145 NM_181446	565112	-	NM_001198594|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##BC101772|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##BC101774|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##BC143520|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##AF255310|STON1|11037|stonin 1##BC121063|STON1|11037|stonin 1##BC121064|STON1|11037|stonin 1##AY026319|STON1|11037|stonin 1##AF026169|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##NM_172311|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##AK314464|STON1|11037|stonin 1##NM_001198595|STON1|11037|stonin 1##NM_006873|STON1|11037|stonin 1##CR936807|STON1|11037|stonin 1##AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like##BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like##AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like##AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like##BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like##S57793|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M63108|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M73746|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK123498|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##NM_000233|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AY429104|FSHR|2492|follicle stimulating hormone receptor##BC096831|FSHR|2492|follicle stimulating hormone receptor##X68044|FSHR|2492|follicle stimulating hormone receptor##JN003607|FSHR|2492|follicle stimulating hormone receptor##BC118548|FSHR|2492|follicle stimulating hormone receptor##BC125270|FSHR|2492|follicle stimulating hormone receptor##M65085|FSHR|2492|follicle stimulating hormone receptor##S59900|FSHR|2492|follicle stimulating hormone receptor##M95489|FSHR|2492|follicle stimulating hormone receptor##AK292562|FSHR|2492|follicle stimulating hormone receptor##AK310367|FSHR|2492|follicle stimulating hormone receptor##NM_000145|FSHR|2492|follicle stimulating hormone receptor##NM_181446|FSHR|2492|follicle stimulating hormone receptor	0.998266	CTCF.p2:7:0.998
chr2	33700859	33700986	reg1023907.p1	6.062	+	AK125551 TSC_hg19_v1_chr2_+_33661417 BC027849 NM_170672 AK292983	-39474	+	TSC_hg19_v1_chr2_+_33359657 NM_000627 NM_001166264 NM_001166265 NM_001166266 AB208801 BC130289 BC144127 BC144128 M34057 AB384737 AF489528	-341217	+	NM_206943	-528554	+	NM_001139488	398	+	TSC_hg19_v1_chr2_+_33701715 BX647990	774	+	AB020653 NM_015376	38019	+	AK125551|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC027849|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_170672|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK292983|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1##AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1##M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1##AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_206943|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001139488|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)	0.0	
chr6	137635333	137635514	reg1000911.p1	6.062	+	TSC_hg19_v1_chr6_-_137540556 NM_000416	-94865	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-94878	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	-94911	-	BC051352 AK096362 NM_175747	180102	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	553114	+	TSC_hg19_v1_chr6_-_138189314 AK124173	553927	-	NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3	0.0	
chr6_cox_hap2	3074491	3074601	reg1024587.p1	6.062	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.586768	CTCF.p2:13:0.587
chr4	76988767	76988876	reg1000435.p1	6.061	+	BT006787 AB590165 CU675091 DQ895703 EU176355 Y15220 U59286 U66096 BC005292 AF002985 AF030514 BC110986 AF352781 BC012532 NM_005409	-31577	-	AB529178 DQ892786 DQ896033 BC010954 X02530 NM_001565	-44185	-	NM_001130017 AK225860 AY543657 AY543658 AY543659 AY543656 U47054	-56427	+	AY543660 BC008397 BC017913 NM_001130016 NM_001179 AK295305 AK308810 AY543655	7048	+	TSC_hg19_v1_chr4_-_77069551 AB527805 DQ895978 EU176395 AK315160 AK001517 AK299442 AK300036 AK223352 AF157322 AK222752 AK307571 BC012559 BX538002 BC034226 NM_017426	80771	-	TSC_hg19_v1_chr4_-_77134713 AB384843 BT006939 CU692412 DQ893535 DQ893757 BC021892	145887	-	BT006787|CXCL11|6373|chemokine (C-X-C motif) ligand 11##DQ895703|CXCL11|6373|chemokine (C-X-C motif) ligand 11##EU176355|CXCL11|6373|chemokine (C-X-C motif) ligand 11##Y15220|CXCL11|6373|chemokine (C-X-C motif) ligand 11##U59286|CXCL11|6373|chemokine (C-X-C motif) ligand 11##U66096|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BC005292|CXCL11|6373|chemokine (C-X-C motif) ligand 11##AF002985|CXCL11|6373|chemokine (C-X-C motif) ligand 11##AF030514|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BC110986|CXCL11|6373|chemokine (C-X-C motif) ligand 11##AF352781|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BC012532|CXCL11|6373|chemokine (C-X-C motif) ligand 11##NM_005409|CXCL11|6373|chemokine (C-X-C motif) ligand 11##DQ892786|CXCL10|3627|chemokine (C-X-C motif) ligand 10##DQ896033|CXCL10|3627|chemokine (C-X-C motif) ligand 10##BC010954|CXCL10|3627|chemokine (C-X-C motif) ligand 10##X02530|CXCL10|3627|chemokine (C-X-C motif) ligand 10##NM_001565|CXCL10|3627|chemokine (C-X-C motif) ligand 10##NM_001130017|ART3|419|ADP-ribosyltransferase 3##AK225860|ART3|419|ADP-ribosyltransferase 3##AY543657|ART3|419|ADP-ribosyltransferase 3##AY543658|ART3|419|ADP-ribosyltransferase 3##AY543659|ART3|419|ADP-ribosyltransferase 3##AY543656|ART3|419|ADP-ribosyltransferase 3##U47054|ART3|419|ADP-ribosyltransferase 3##AY543660|ART3|419|ADP-ribosyltransferase 3##BC008397|ART3|419|ADP-ribosyltransferase 3##BC017913|ART3|419|ADP-ribosyltransferase 3##NM_001130016|ART3|419|ADP-ribosyltransferase 3##NM_001179|ART3|419|ADP-ribosyltransferase 3##AK295305|ART3|419|ADP-ribosyltransferase 3##AK308810|ART3|419|ADP-ribosyltransferase 3##AY543655|ART3|419|ADP-ribosyltransferase 3##DQ895978|NUP54|53371|nucleoporin 54kDa##EU176395|NUP54|53371|nucleoporin 54kDa##AK315160|NUP54|53371|nucleoporin 54kDa##AK001517|NUP54|53371|nucleoporin 54kDa##AK299442|NUP54|53371|nucleoporin 54kDa##AK300036|NUP54|53371|nucleoporin 54kDa##AK223352|NUP54|53371|nucleoporin 54kDa##AF157322|NUP54|53371|nucleoporin 54kDa##AK222752|NUP54|53371|nucleoporin 54kDa##AK307571|NUP54|53371|nucleoporin 54kDa##BC012559|NUP54|53371|nucleoporin 54kDa##BX538002|NUP54|53371|nucleoporin 54kDa##BC034226|NUP54|53371|nucleoporin 54kDa##NM_017426|NUP54|53371|nucleoporin 54kDa##BT006939|SCARB2|950|scavenger receptor class B, member 2##DQ893535|SCARB2|950|scavenger receptor class B, member 2##DQ893757|SCARB2|950|scavenger receptor class B, member 2##BC021892|SCARB2|950|scavenger receptor class B, member 2	0.0	
chr4	81142439	81142566	reg1023882.p1	6.061	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	-23848	+	AF275815 NM_020226	-36079	+	TSC_hg19_v1_chr4_-_80994394 NM_001145794 NM_058172 BC107876	-148035	-	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	45357	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	114395	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	809640	+	NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##AF275815|PRDM8|56978|PR domain containing 8##NM_020226|PRDM8|56978|PR domain containing 8##NM_001145794|ANTXR2|118429|anthrax toxin receptor 2##NM_058172|ANTXR2|118429|anthrax toxin receptor 2##BC107876|ANTXR2|118429|anthrax toxin receptor 2##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3	0.284465	CTCF.p2:2:0.284
chr11	102535214	102535363	reg1024034.p1	6.060	+	AB527354 NM_004771 Y12779	-39233	-	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	-133829	-	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-211675	-	AB527320 AF195192 AY358752 NM_022122	41167	-	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	60365	-	BT007442 DQ891931 DQ895118 X07820 BC002591 AK222601 AK313960 NM_002425	116051	-	NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BT007442|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ891931|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ895118|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##X07820|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##BC002591|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##AK222601|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##AK313960|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##NM_002425|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)	0.041873	
chr11	6460349	6460473	reg1024203.p2	6.060	+	AK297544 BC010854 NM_145689 TSC_hg19_v1_chr11_-_6440647	-19771	-	TSC_hg19_v1_chr11_-_6440299 AK293452 AF394214 L77864 NM_001164 AK293613 AK294495 AK311725	-20088	-	TSC_hg19_v1_chr11_+_6411681 NM_000543 NM_001007593 AB209775 AK292388 X59960 BC041164 M59916 AY649987 HQ132745 HQ132746 HQ132747 HQ132748	-48679	+	X02537 J03048 AK303758 AK313648 TSC_hg19_v1_chr11_-_6462218 BC005395 NM_000613	1780	-	AK299586 AK311127 TSC_hg19_v1_chr11_-_6495154 AK298843 AK126685 BC096827 NM_001248007 NM_006458 NM_033278	34720	-	AK291396 NM_001248006	35277	-	AK297544|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##BC010854|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_145689|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK293452|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AF394214|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##L77864|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_001164|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK293613|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK294495|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK311725|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_000543|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##NM_001007593|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AB209775|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK292388|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##X59960|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##BC041164|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##M59916|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AY649987|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132745|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132746|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132747|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132748|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##X02537|HPX|3263|hemopexin##J03048|HPX|3263|hemopexin##AK303758|HPX|3263|hemopexin##AK313648|HPX|3263|hemopexin##BC005395|HPX|3263|hemopexin##NM_000613|HPX|3263|hemopexin##AK299586|TRIM3|10612|tripartite motif containing 3##AK311127|TRIM3|10612|tripartite motif containing 3##AK298843|TRIM3|10612|tripartite motif containing 3##AK126685|TRIM3|10612|tripartite motif containing 3##BC096827|TRIM3|10612|tripartite motif containing 3##NM_001248007|TRIM3|10612|tripartite motif containing 3##NM_006458|TRIM3|10612|tripartite motif containing 3##NM_033278|TRIM3|10612|tripartite motif containing 3##AK291396|TRIM3|10612|tripartite motif containing 3##NM_001248006|TRIM3|10612|tripartite motif containing 3	0.977698	CTCF.p2:-8:0.978
chr2	46884238	46884383	reg1023155.p1	6.060	+	TSC_hg19_v1_chr2_+_46844353 NM_014171 AK291298 AF161488 BC018653 BC006980 BC006979	-39957	+	TSC_hg19_v1_chr2_-_46844187 BC021725 BC029408 AK291108 NM_002643 NM_173074	-40093	-	BC010864 D13435 TSC_hg19_v1_chr2_-_46844167 BC039303	-40148	-	TSC_hg19_v1_chr2_+_46926049 AK290194 AK296796 AB014571 AL136896 NM_014011	41763	+	TSC_hg19_v1_chr2_+_46926340 BC032862 AF073958 NM_144949	42091	+	TSC_hg19_v1_chr2_-_47134945 M23161	250701	-	NM_014171|CRIPT|9419|cysteine-rich PDZ-binding protein##AK291298|CRIPT|9419|cysteine-rich PDZ-binding protein##AF161488|CRIPT|9419|cysteine-rich PDZ-binding protein##BC018653|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006980|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006979|CRIPT|9419|cysteine-rich PDZ-binding protein##BC021725|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##BC029408|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##AK291108|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##NM_002643|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##NM_173074|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##D13435|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##AK290194|SOCS5|9655|suppressor of cytokine signaling 5##AB014571|SOCS5|9655|suppressor of cytokine signaling 5##AL136896|SOCS5|9655|suppressor of cytokine signaling 5##NM_014011|SOCS5|9655|suppressor of cytokine signaling 5##BC032862|SOCS5|9655|suppressor of cytokine signaling 5##AF073958|SOCS5|9655|suppressor of cytokine signaling 5##NM_144949|SOCS5|9655|suppressor of cytokine signaling 5##M23161|MCFD2|90411|multiple coagulation factor deficiency 2	0.0	
chr9	127703382	127703546	reg1023582.p1	6.060	+	TSC_hg19_v1_chr9_-_127703357 BC032853 U51587 NM_002077	-125	-	TSC_hg19_v1_chr9_-_127703273 AK302445	-203	-	TSC_hg19_v1_chr9_+_127631514 AF087842 BC000018 BC002418 HQ448697	-71932	+	AB590983 TSC_hg19_v1_chr9_-_127905808 BC104030 BC104031 BC104032 AK098024 AK093983 AX748393 NM_001144877 NM_173690	202327	-	AB385530 AF035158 BT019708 X92972 TSC_hg19_v1_chr9_-_127952023	248545	-	AK295752 TSC_hg19_v1_chr9_-_127952069 AK312332 BC006990 AK316527 AK295190 AK299087 NM_001123355 NM_001123369 NM_002721	248663	-	BC032853|GOLGA1|2800|golgin A1##U51587|GOLGA1|2800|golgin A1##NM_002077|GOLGA1|2800|golgin A1##AK302445|GOLGA1|2800|golgin A1##AF087842|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##BC000018|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##BC002418|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##HQ448697|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##BC104030|SCAI|286205|suppressor of cancer cell invasion##BC104031|SCAI|286205|suppressor of cancer cell invasion##BC104032|SCAI|286205|suppressor of cancer cell invasion##AK098024|SCAI|286205|suppressor of cancer cell invasion##AK093983|SCAI|286205|suppressor of cancer cell invasion##NM_001144877|SCAI|286205|suppressor of cancer cell invasion##NM_173690|SCAI|286205|suppressor of cancer cell invasion##AF035158|PPP6C|5537|protein phosphatase 6, catalytic subunit##BT019708|PPP6C|5537|protein phosphatase 6, catalytic subunit##X92972|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK295752|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK312332|PPP6C|5537|protein phosphatase 6, catalytic subunit##BC006990|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK316527|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK295190|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK299087|PPP6C|5537|protein phosphatase 6, catalytic subunit##NM_001123355|PPP6C|5537|protein phosphatase 6, catalytic subunit##NM_001123369|PPP6C|5537|protein phosphatase 6, catalytic subunit##NM_002721|PPP6C|5537|protein phosphatase 6, catalytic subunit	0.0	
chr10	121249197	121249307	reg1005257.p1	6.059	+	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-281991	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-310905	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-310949	-	NM_002925	46792	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	52938	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	106856	-	BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.0	
chr18	33091936	33092062	reg1021547.p2	6.059	+	AK095502 AK300660 BC039404 NM_001098817 NM_194281	-14074	-	BC130288 BC136314 AF492004 AF533251 AK055775 NM_145756	-134706	-	TSC_hg19_v1_chr18_-_32924421 AK291246 NM_006965	-167578	-	NM_020474 BC047746 U41514 AB529022 X85018	142580	+	NM_001201474 NM_001201475 NM_001201476 NM_031446 BC108730 TSC_hg19_v1_chr18_+_33552656 BC119765 BC119766 AK311536 AF277182 AF277189 BC025950	460668	+	TSC_hg19_v1_chr18_-_33647515 DQ892910 EU176720 AF419845 NM_018170 BC000225 AK314569	555428	-	AK095502|INO80C|125476|INO80 complex subunit C##AK300660|INO80C|125476|INO80 complex subunit C##BC039404|INO80C|125476|INO80 complex subunit C##NM_001098817|INO80C|125476|INO80 complex subunit C##NM_194281|INO80C|125476|INO80 complex subunit C##BC130288|ZNF396|252884|zinc finger protein 396##BC136314|ZNF396|252884|zinc finger protein 396##AF492004|ZNF396|252884|zinc finger protein 396##AF533251|ZNF396|252884|zinc finger protein 396##AK055775|ZNF396|252884|zinc finger protein 396##NM_145756|ZNF396|252884|zinc finger protein 396##AK291246|ZNF24|7572|zinc finger protein 24##NM_006965|ZNF24|7572|zinc finger protein 24##NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21##NM_031446|C18orf21|83608|chromosome 18 open reading frame 21##BC108730|C18orf21|83608|chromosome 18 open reading frame 21##BC119765|C18orf21|83608|chromosome 18 open reading frame 21##BC119766|C18orf21|83608|chromosome 18 open reading frame 21##AF277182|C18orf21|83608|chromosome 18 open reading frame 21##AF277189|C18orf21|83608|chromosome 18 open reading frame 21##BC025950|C18orf21|83608|chromosome 18 open reading frame 21##DQ892910|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##EU176720|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AF419845|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##NM_018170|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC000225|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK314569|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A	0.935733	CTCF.p2:1:0.936
chr18	47294514	47294611	reg1023525.p1	6.059	+	AK315252 TSC_hg19_v1_chr18_+_47088426 AF118767 AK291799 NM_006033 AK300333 BC060825 AY358928	-206134	+	TSC_hg19_v1_chr18_+_47087059 AK125344	-207500	+	TSC_hg19_v1_chr18_-_47018852 AK304659 AK311828 BC066323 BC017831 BC066324 NM_000985 NM_001035006 NM_001199340 NM_001199345 NM_001199356	-275674	-	CU674934 DQ893376 DQ896697 AB529169 BC001918 TSC_hg19_v1_chr18_-_47339904 AK225457 D16294	45352	-	TSC_hg19_v1_chr18_-_47340253 AK054673 NM_006111 AK314462	45708	-	TSC_hg19_v1_chr18_+_47340396 AK123464	45829	+	AK315252|LIPG|9388|lipase, endothelial##AF118767|LIPG|9388|lipase, endothelial##AK291799|LIPG|9388|lipase, endothelial##NM_006033|LIPG|9388|lipase, endothelial##AK300333|LIPG|9388|lipase, endothelial##BC060825|LIPG|9388|lipase, endothelial##AY358928|LIPG|9388|lipase, endothelial##AK125344|LIPG|9388|lipase, endothelial##AK304659|RPL17|6139|ribosomal protein L17##AK311828|RPL17|6139|ribosomal protein L17##BC066323|RPL17|6139|ribosomal protein L17##BC017831|RPL17|6139|ribosomal protein L17##BC066324|RPL17|6139|ribosomal protein L17##NM_000985|RPL17|6139|ribosomal protein L17##NM_001035006|RPL17|6139|ribosomal protein L17##NM_001199340|RPL17|6139|ribosomal protein L17##NM_001199345|RPL17|6139|ribosomal protein L17##NM_001199356|RPL17-C18ORF32|100526842|RPL17-C18orf32 readthrough##DQ893376|ACAA2|10449|acetyl-CoA acyltransferase 2##DQ896697|ACAA2|10449|acetyl-CoA acyltransferase 2##BC001918|ACAA2|10449|acetyl-CoA acyltransferase 2##AK225457|ACAA2|10449|acetyl-CoA acyltransferase 2##D16294|ACAA2|10449|acetyl-CoA acyltransferase 2##AK054673|ACAA2|10449|acetyl-CoA acyltransferase 2##NM_006111|ACAA2|10449|acetyl-CoA acyltransferase 2##AK314462|ACAA2|10449|acetyl-CoA acyltransferase 2	0.02765	
chr4	115338492	115338630	reg1026182.p1	6.059	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-437722	-	TSC_hg19_v1_chr4_-_114682923 NM_001221 NM_172114 NM_172115 NM_172127 NM_172128 NM_172129	-655591	-	TSC_hg19_v1_chr4_-_114682619 AK055642 AB209288	-655905	-	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	181022	+	NM_003360 U30930	204961	+	BC113075 BC012326 AK289670 AB036429 NM_022569	696420	-	AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##NM_001221|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172114|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172115|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172127|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172128|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172129|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK055642|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AB209288|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	0.569174	CTCF.p2:0:0.569
chr5	148747157	148747283	reg1023769.p2	6.059	+	TSC_hg19_v1_chr5_+_148737613 AF451985 BC000014	-9597	+	NM_024028 TSC_hg19_v1_chr5_+_148737608 AK075414	-9630	+	TSC_hg19_v1_chr5_+_148731227 AK091237 AX746868	-15939	+	AB590699 CR457192 BC113925 BC113946 AF152098 AF184969 AF218727 AY358931 AF110385 AF212311 NM_014443 TSC_hg19_v1_chr5_-_148758856	11602	-	TSC_hg19_v1_chr5_+_148786440 AK126481 CR933654 BX640700	39262	+	AF218004 TSC_hg19_v1_chr5_-_148930935 AK303794 BC021971 BC025371 BC007246	183704	-	AF451985|PCYOX1L|78991|prenylcysteine oxidase 1 like##BC000014|PCYOX1L|78991|prenylcysteine oxidase 1 like##NM_024028|PCYOX1L|78991|prenylcysteine oxidase 1 like##AK075414|PCYOX1L|78991|prenylcysteine oxidase 1 like##AK091237|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##CR457192|IL17B|27190|interleukin 17B##BC113925|IL17B|27190|interleukin 17B##BC113946|IL17B|27190|interleukin 17B##AF152098|IL17B|27190|interleukin 17B##AF184969|IL17B|27190|interleukin 17B##AF218727|IL17B|27190|interleukin 17B##AY358931|IL17B|27190|interleukin 17B##AF110385|IL17B|27190|interleukin 17B##AF212311|IL17B|27190|interleukin 17B##NM_014443|IL17B|27190|interleukin 17B##AK126481|MIR143HG|728264|MIR143 host gene (non-protein coding)##CR933654|MIR143HG|728264|MIR143 host gene (non-protein coding)##AF218004|CSNK1A1|1452|casein kinase 1, alpha 1##AK303794|CSNK1A1|1452|casein kinase 1, alpha 1##BC021971|CSNK1A1|1452|casein kinase 1, alpha 1##BC025371|CSNK1A1|1452|casein kinase 1, alpha 1##BC007246|CSNK1A1|1452|casein kinase 1, alpha 1	0.763894	CTCF.p2:-3:0.764
chr9	133559501	133559672	reg1023251.p1	6.059	+	AY004252 NM_021619	-19606	+	TSC_hg19_v1_chr9_+_133455030 BC007874	-104561	+	TSC_hg19_v1_chr9_+_133454991 U69127	-104590	+	TSC_hg19_v1_chr9_+_133569166 AK001916 AK296605 NM_014285 AK022460 AK090512 AK303163 BC000747 DQ892753 EU176744 AB463621	9578	+	NM_007313 AB209642 M14753	29733	+	TSC_hg19_v1_chr9_+_133710665 M30833 X16416	151081	+	AY004252|PRDM12|59335|PR domain containing 12##NM_021619|PRDM12|59335|PR domain containing 12##BC007874|FUBP3|8939|far upstream element (FUSE) binding protein 3##U69127|FUBP3|8939|far upstream element (FUSE) binding protein 3##AK001916|EXOSC2|23404|exosome component 2##AK296605|EXOSC2|23404|exosome component 2##NM_014285|EXOSC2|23404|exosome component 2##AK022460|EXOSC2|23404|exosome component 2##AK090512|EXOSC2|23404|exosome component 2##AK303163|EXOSC2|23404|exosome component 2##BC000747|EXOSC2|23404|exosome component 2##DQ892753|EXOSC2|23404|exosome component 2##EU176744|EXOSC2|23404|exosome component 2##NM_007313|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AB209642|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M14753|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	0.014922	
chr9	6686553	6686674	reg1020928.p1	6.059	+	BC111993 BC111995 M63635 D90239 M64590 AK314156 NM_000170	-40986	-	TSC_hg19_v1_chr9_+_6413338 AF274049 AB071698 EU176286 EU176602 AB385208	-273208	+	TSC_hg19_v1_chr9_+_6413200 AK308433	-273416	+	AK310439 NM_001146696	34249	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	71054	+	TSC_hg19_v1_chr9_+_6757984 AB018323 AK304095 AK314355 AB037901 BC008296 AK303651 AK304032 BC104859 BC104861 BC143571	71426	+	BC111993|GLDC|2731|glycine dehydrogenase (decarboxylating)##BC111995|GLDC|2731|glycine dehydrogenase (decarboxylating)##M63635|GLDC|2731|glycine dehydrogenase (decarboxylating)##D90239|GLDC|2731|glycine dehydrogenase (decarboxylating)##M64590|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK314156|GLDC|2731|glycine dehydrogenase (decarboxylating)##NM_000170|GLDC|2731|glycine dehydrogenase (decarboxylating)##AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK308433|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C##AB018323|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304095|KDM4C|23081|lysine (K)-specific demethylase 4C##AK314355|KDM4C|23081|lysine (K)-specific demethylase 4C##AB037901|KDM4C|23081|lysine (K)-specific demethylase 4C##BC008296|KDM4C|23081|lysine (K)-specific demethylase 4C##AK303651|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304032|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104859|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104861|KDM4C|23081|lysine (K)-specific demethylase 4C##BC143571|KDM4C|23081|lysine (K)-specific demethylase 4C	0.215354	CTCF.p2:10:0.215
chr10	61666728	61666859	reg1018406.p2	6.058	+	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-469	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	-592	-	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-197069	-	AK292927 AK092527 NM_001149	233923	-	U13616 NM_020987	482767	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	665897	-	BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##S72869|CCDC6|8030|coiled-coil domain containing 6##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.0	
chr14	106993663	106993786	reg1023911.p2	6.058	+	BX640710 TSC_hg19_v1_chr14_-_106967543 AK097354 AK097357 L22586 AK092384 AK125238 AX747511 AK125703 AK092976 AX747834 AK097028 L06610	-26157	-	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	-26424	-	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	-55266	+	GQ232968 DQ454715 DQ454740 DQ454804 FJ840179 GU552701 FJ840340 GQ232950 GQ232981 GU552754 DQ454538 DQ454540 DQ454585 DQ523858 GU552713 AY003858 DQ454386 DQ454541 DQ454621 DQ454676 GU552719 GU552720 GU552767 AY003800 EF566901 DQ454598 DQ454606 DQ454788 DQ455001 DQ454592 Z11947 FJ873823 FJ873826 FJ873839 FJ873846 FJ873864 FJ873876 FJ873933 FJ873992 HM116214 EF175393 AY003851 EF175424 EU350424 GU358679 JF810268 EU099085 EU099261 AY206990 AF103064 AM279530 HM996031 GQ903512 AF103334 AF062095 AF103183 AF103113 L07311 AF165109 AY062321 HM774774 JN110645 JN110658 JN110671 JN110688 JN110706 JN110718 FJ385349 HM774039 HM774378 HM774566 HM774910 HQ704000 HQ704008 HQ704009 AY062300 HM774238 HM775050 AF103319 AF194121 HM775049 DQ100804 EU146317 EU146347 EU146389 DQ100818 DQ100905 AJ006652 AF485463 AF485473 AY423189 AY423190 AY423196 AY423198 AY423199 AY423207 HM996483 AF103257 AY941883 DQ100909 AF006520 AJ249628 AY866746 DQ187712 DQ524024 GU570284 HM995016 HM995139 HM995190 HM995191 HM995236 HM995887 HM995889 HM995890 HM995891 HM995919 HM996054 HM996304 HM996511 AJ245323 AJ245324 DQ322799 DQ840839 DQ840841 DQ926120 DQ926247 DQ926326 AB374202 AF115123 AF174048 AJ245353 AJ245354 AJ245355 AJ278773 AY640567 AY866807 AY941926 AY944711 DQ100900 DQ100918 DQ926040 DQ926081 DQ926084 DQ926450 DQ926565 DQ926602 DQ926604 EU794403 Z18824 AB021525 AB063673 AB363090 AB363101 AB363126 AB363166 AF021949 AF021979 AF035023 AF052525 AF062215 AF062235 AF129457 AF174081 AF398962 AF408730 AF455546 AF455553 AF471175 AF471178 AF471201 AF471216 AF471265 AF471373 AF471475 AF471476 AF471477 AF471486 AF471490 AF471494 AF471528 AJ239363 AJ239370 AJ389190 AJ413993 AJ627249 AM040520 AM040566 AM259133 AM259134 AY466507 AY866733 AY866738 AY866759 AY866795 AY941854 AY941870 AY941906 AY941952 AY941974 AY941976 AY941980 AY962566 D83682 DQ065617 DQ205182 DQ212502 DQ212503 DQ535300 DQ535366 DQ535419 DQ535472 DQ926167 DQ926385 DQ926389 DQ926413 DQ926426 DQ926459 DQ926557 DQ926616 EF177950 EU549721 FJ492926 GQ903506 GU570336 GU570338 GU570341 HM152510 U00501 U77374 X59703 X87449 Z33898 Z96965 Z98722 AF283800 AJ519241 HM995874 AJ519332 L28051 AJ519250 AJ519294 AY392920 AY393056 L08082 AF062182 AF062206 AF062253 AF062285 AY190818 X81729 Z47218 TSC_hg19_v1_chr14_-_106994347 AK097076 AK097206 AK097859 AK126358 AK128664 AK130501 AK301358 BX640853 BX640854	450	-	DQ187707 GU552700 GU552764 AY003783 EF175429 FJ694883 EU099078 EU099213 AM183990 EU099124 HM774924 HM774242 JN110729 JN110849 AF103239 FJ385422 FJ385433 HM773968 HM773995 HM774338 HM774389 HM774601 HM774867 HM996424 HQ704020 FJ385411 EU146318 JN110975 AF062300 AF062305 DQ524053 HM994912 HM994914 HM994916 HM994920 HM995673 HM995674 HM995675 HM995676 HM995783 HM995910 HM995945 HM996441 HM996522 AF062299 AF471505 DQ187607 DQ322806 DQ840692 DQ840693 DQ840702 DQ840814 AM279609 DQ926615 EF178081 X99992 AB063924 AB066892 AB066969 AB067011 AB067080 AB067263 AF394199 AF455925 AF459632 AF471500 AF471503 AF471504 AJ300805 AJ579185 AY055477 AY055483 AY640482 AY941852 D83692 DQ005278 DQ005282 DQ100801 DQ926649 GU570351 GU570352 GU570354 L12185 L12186 X64240 Y11898 Z96974 HM995768 AJ519245 AJ519224 AJ519230 AJ519233 AJ519246 AJ519249 AJ519251 AJ519253 AJ519255 HM995877 AJ519222 AJ519299 AY393054 AY393058 AY393158 AY393161 AY190818 Z36887 AY623427 X52894 BC090938 TSC_hg19_v1_chr14_-_107013458	19566	-	TSC_hg19_v1_chr14_-_107013478 AK093806 AK097303 AK125632 AK126320 AK129510 AX748317	19752	-	BX640710|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK097354|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097357|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK092384|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125238|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092976|IGHM|3507|immunoglobulin heavy constant mu##AK097028|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221##AF035023|IGHV3-48|28424|immunoglobulin heavy variable 3-48##AK097076|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097859|IGHM|3507|immunoglobulin heavy constant mu##AK128664|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130501|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640854|IGH@|3492|immunoglobulin heavy locus##AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.997864	CTCF.p2:21:0.998
chr22	47194618	47194710	reg1022560.p2	6.058	+	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	-36064	+	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	-60509	-	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	-60585	-	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	832839	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	1690616	+	AK125256 NM_015381 AK123443 AY358847	1777497	+	NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##AK093107|LOC284930|284930|uncharacterized LOC284930##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	0.383284	CTCF.p2:12:0.383
chr7	86227762	86227903	reg1023152.p2	6.058	+	AK309116 TSC_hg19_v1_chr7_-_84816296	-1411597	-	NM_152754	-1476586	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-2403510	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	45393	+	AK291406 TSC_hg19_v1_chr7_+_86273870	46039	+	AK294701 TSC_hg19_v1_chr7_+_86274004 BC022496	46159	+	AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3##AK291406|GRM3|2913|glutamate receptor, metabotropic 3##AK294701|GRM3|2913|glutamate receptor, metabotropic 3##BC022496|GRM3|2913|glutamate receptor, metabotropic 3	0.975838	CTCF.p2:-8:0.976
chr9	80876491	80876600	reg1022296.p1	6.058	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	-25515	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-230361	-	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	-613314	-	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	35513	+	TSC_hg19_v1_chr9_+_82186879 NM_007005	1310341	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	1310979	+	NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.683143	CTCF.p2:-16:0.683
chr11	311175	311295	reg1023150.p1	6.057	+	NM_006435 TSC_hg19_v1_chr11_+_308199 BC009696 DQ891667 DQ894615 BT009859 CR456894 CR541874 X02490	-3065	+	BC150562 BC150563 NM_001025295	-11714	-	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	-22093	+	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	2776	+	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	9609	-	TSC_hg19_v1_chr11_-_320925 X57352	9752	-	NM_006435|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC009696|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ891667|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ894615|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BT009859|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR456894|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR541874|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##X02490|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3##X57352|IFITM3|10410|interferon induced transmembrane protein 3	0.0	
chr1	220363221	220363350	reg1023230.p1	6.057	+	TSC_hg19_v1_chr1_+_220267495 AY952883 D28500 AK291432 BC040376	-95679	+	TSC_hg19_v1_chr1_+_220267461 AY267462 NM_018060 BC137438	-95833	+	AJ249339 TSC_hg19_v1_chr1_-_220263167 AK315962 NM_006085	-100111	-	AB020646 BC146760 TSC_hg19_v1_chr1_-_220445745 BC050630 AF004828 BC131573	82427	-	TSC_hg19_v1_chr1_-_220445773 AF255648 AK021928 BC098383	82480	-	TSC_hg19_v1_chr1_-_220445786 AK291234	82505	-	AY952883|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##D28500|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##AK291432|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##BC040376|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##AJ249339|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AK315962|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##NM_006085|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AB020646|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC146760|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC050630|AURKAPS1|6791|aurora kinase A pseudogene 1##AF004828|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC131573|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AF255648|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AK021928|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC098383|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AK291234|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)	0.80597	CTCF.p2:-17:0.806
chr17	37824787	37824934	reg1024063.p1	6.057	+	BC037246 NM_002686	-354	+	NM_003673 BC012628 BC013330 AJ000491 DQ892812 DQ896058	-3256	+	NM_001165937 NM_001165938 NM_006804 TSC_hg19_v1_chr17_+_37793404 BC008356 AK301524 AK303114 AK300176 AK225069 BC025679 BC008747 D38255 BC019286 X80198 AK300842	-31473	+	CU679785 AY358437 TSC_hg19_v1_chr17_-_37844279 AB088396 AK314469 BC010652 AK057911 AK075474 AK289612 AK294639 AK301106 NM_033419	19427	-	TSC_hg19_v1_chr17_+_37844346 AK295195 AB025286 BC110392 NM_001005862	19498	+	TSC_hg19_v1_chr17_+_37856197 AB587321	31336	+	BC037246|PNMT|5409|phenylethanolamine N-methyltransferase##NM_002686|PNMT|5409|phenylethanolamine N-methyltransferase##NM_003673|TCAP|8557|titin-cap (telethonin)##BC012628|TCAP|8557|titin-cap (telethonin)##BC013330|TCAP|8557|titin-cap (telethonin)##AJ000491|TCAP|8557|titin-cap (telethonin)##DQ892812|TCAP|8557|titin-cap (telethonin)##DQ896058|TCAP|8557|titin-cap (telethonin)##NM_001165937|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##NM_001165938|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##NM_006804|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC008356|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK301524|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK303114|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK300176|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK225069|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC025679|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC008747|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##D38255|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC019286|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##X80198|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK300842|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AY358437|PGAP3|93210|post-GPI attachment to proteins 3##AB088396|PGAP3|93210|post-GPI attachment to proteins 3##AK314469|PGAP3|93210|post-GPI attachment to proteins 3##BC010652|PGAP3|93210|post-GPI attachment to proteins 3##AK057911|PGAP3|93210|post-GPI attachment to proteins 3##AK075474|PGAP3|93210|post-GPI attachment to proteins 3##AK289612|PGAP3|93210|post-GPI attachment to proteins 3##AK294639|PGAP3|93210|post-GPI attachment to proteins 3##AK301106|PGAP3|93210|post-GPI attachment to proteins 3##NM_033419|PGAP3|93210|post-GPI attachment to proteins 3##AK295195|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##AB025286|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##BC110392|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##NM_001005862|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	0.034524	
chr21	40041251	40041367	reg1020061.p1	6.057	+	AY204740 AY204741 AY204742 AY204743 NM_001243432 TSC_hg19_v1_chr21_-_40033677 AK297807 NM_001136154 NM_004449	-7649	-	TSC_hg19_v1_chr21_-_40032563 AK309469 NM_001243428	-8733	-	M21535 NM_001243429	-84464	-	J04102 TSC_hg19_v1_chr21_+_40177830	136488	+	TSC_hg19_v1_chr21_+_40177852 NM_005239 BC042954 AK315563 BC017040	136568	+	CU678538 AB451468 AF417108 AY463963 CR541821 CR541852 DQ892311 DQ895511 TSC_hg19_v1_chr21_-_40555337	514013	-	AY204740|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204741|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204742|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204743|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243432|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK297807|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136154|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_004449|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK309469|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243428|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##M21535|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243429|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##J04102|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AB451468|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AF417108|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AY463963|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541821|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541852|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ892311|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ895511|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1	0.603363	CTCF.p2:8:0.603
chr4	128508241	128508380	reg1026599.p1	6.057	+	NM_024582	-2270744	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	-2874496	-	AK026960 BC063856 NM_005841	-4187637	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	45829	+	TSC_hg19_v1_chr4_+_128651573 NM_031291 AL136857 AY550240 BC022032 AB528294 AM393262 CU692468 AJ863129	143299	+	TSC_hg19_v1_chr4_+_128703445 BC040560 NM_014278	195123	+	NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##NM_031291|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AL136857|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AY550240|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC022032|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AM393262|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AJ863129|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC040560|HSPA4L|22824|heat shock 70kDa protein 4-like##NM_014278|HSPA4L|22824|heat shock 70kDa protein 4-like	0.736956	CTCF.p2:-2:0.737
chr5	90098652	90098797	reg1024579.p2	6.057	+	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	-244110	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-273358	-	NM_006467 AK295434 U93868	-328022	+	AK091866 TSC_hg19_v1_chr5_-_90610220	511521	-	TSC_hg19_v1_chr5_+_90676181 BC043415	577438	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	580408	-	AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3	0.709547	CTCF.p2:14:0.710
chr6_qbl_hap6	2858524	2858640	reg1025029.p1	6.057	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.586768	CTCF.p2:7:0.587
chrX	46501666	46501824	reg1024627.p1	6.057	+	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	-68467	+	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	-96801	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	-96889	-	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	116784	-	TSC_hg19_v1_chrX_-_46618608 BC094742	116885	-	NM_006915 AJ007590 TSC_hg19_v1_chrX_+_46696391 BC027851	194632	+	NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##BC094742|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	1.00303	CTCF.p2:2:0.970
chr17	7537770	7537921	reg1028565.p1	6.056	+	EU352660 NM_001040 NM_001146279 NM_001146280 NM_001146281 TSC_hg19_v1_chr17_+_7533452 BC101785 BC112186 BC069597 X05403 EU352661 EU352662 EU352663 EU352664	-4334	+	TSC_hg19_v1_chr17_+_7533444 EU352659	-4420	+	TSC_hg19_v1_chr17_+_7531286 AK302603 EU352657 EU352658 X16351 EU352665 EU352666 EU352667 EU352668 EU352669	-6499	+	TSC_hg19_v1_chr17_+_7554243 NM_001678	16401	+	TSC_hg19_v1_chr17_+_7554417 M81181 AK290143 BC126175	16612	+	TSC_hg19_v1_chr17_+_7554712 U45945 HQ258155 AY946017	16968	+	EU352660|SHBG|6462|sex hormone-binding globulin##NM_001040|SHBG|6462|sex hormone-binding globulin##NM_001146279|SHBG|6462|sex hormone-binding globulin##NM_001146280|SHBG|6462|sex hormone-binding globulin##NM_001146281|SHBG|6462|sex hormone-binding globulin##BC101785|SHBG|6462|sex hormone-binding globulin##BC112186|SHBG|6462|sex hormone-binding globulin##BC069597|SHBG|6462|sex hormone-binding globulin##X05403|SHBG|6462|sex hormone-binding globulin##EU352661|SHBG|6462|sex hormone-binding globulin##EU352662|SHBG|6462|sex hormone-binding globulin##EU352663|SHBG|6462|sex hormone-binding globulin##EU352664|SHBG|6462|sex hormone-binding globulin##EU352659|SHBG|6462|sex hormone-binding globulin##AK302603|SHBG|6462|sex hormone-binding globulin##EU352657|SHBG|6462|sex hormone-binding globulin##EU352658|SHBG|6462|sex hormone-binding globulin##X16351|SHBG|6462|sex hormone-binding globulin##EU352665|SHBG|6462|sex hormone-binding globulin##EU352666|SHBG|6462|sex hormone-binding globulin##EU352667|SHBG|6462|sex hormone-binding globulin##EU352668|SHBG|6462|sex hormone-binding globulin##EU352669|SHBG|6462|sex hormone-binding globulin##NM_001678|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide##M81181|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide##AK290143|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide##BC126175|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide##U45945|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide##HQ258155|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide##AY946017|ATP1B2|482|ATPase, Na+/K+ transporting, beta 2 polypeptide	0.02304	
chr6	26572951	26573094	reg1018962.p1	6.056	+	TSC_hg19_v1_chr6_+_26538630 NM_006353 AK311841 BC001282	-34392	+	U39576 BC096312 BC096313 BC096314 BC096315 NM_001732	-71551	+	NM_001197234 NM_007049 NM_078476 TSC_hg19_v1_chr6_+_26458182 AK297098 NM_001197233 BC016661 AB209777 U90543	-114832	+	TSC_hg19_v1_chr6_+_26597203 NM_013375 BC066313 BC048812 AB027258 AB463399 CU688138 CU690582 EU446795	24185	+	TSC_hg19_v1_chr6_-_26659967 NM_001242797 NM_001242798 NM_001242799 NM_024639	86930	-	AB591038 BC014312 TSC_hg19_v1_chr6_-_27100575 NM_021058 AK311849	527543	-	NM_006353|HMGN4|10473|high mobility group nucleosomal binding domain 4##AK311841|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC001282|HMGN4|10473|high mobility group nucleosomal binding domain 4##U39576|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096312|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096313|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096314|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096315|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001732|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001197234|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_007049|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_078476|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AK297098|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_001197233|BTN2A1|11120|butyrophilin, subfamily 2, member A1##BC016661|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AB209777|BTN2A1|11120|butyrophilin, subfamily 2, member A1##U90543|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_013375|ABT1|29777|activator of basal transcription 1##BC066313|ABT1|29777|activator of basal transcription 1##BC048812|ABT1|29777|activator of basal transcription 1##AB027258|ABT1|29777|activator of basal transcription 1##EU446795|ABT1|29777|activator of basal transcription 1##NM_001242797|ZNF322|79692|zinc finger protein 322##NM_001242798|ZNF322|79692|zinc finger protein 322##NM_001242799|ZNF322|79692|zinc finger protein 322##NM_024639|ZNF322|79692|zinc finger protein 322##BC014312|HIST1H2BJ|8970|histone cluster 1, H2bj##NM_021058|HIST1H2BJ|8970|histone cluster 1, H2bj##AK311849|HIST1H2BJ|8970|histone cluster 1, H2bj	0.957292	CTCF.p2:-5:0.957
chr9	9912595	9912690	reg1021163.p1	6.056	+	TSC_hg19_v1_chr9_+_8858136 AK094342	-1054509	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-1178723	-	TSC_hg19_v1_chr9_+_8713275 AY779046	-1199350	+	BC028038 NM_002839	700080	-	NM_000550 X51420 BC052608	2780783	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	2862374	+	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##AY779046|RPL18A|6142|ribosomal protein L18a##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150	0.979157	CTCF.p2:3:0.979
chr10	95581293	95581403	reg1024085.p1	6.055	+	NM_005097 BC022500 AF055636 AF473548 AK309416 AY358885 AK303956	-63702	+	TSC_hg19_v1_chr10_-_95462320 AJ431721 AJ431722 AJ431723 AJ431724 AJ431725 AK090955 AX746703 NM_145246	-119013	-	NM_006204 U31973 BC111377	-208941	+	TSC_hg19_v1_chr10_+_95653753 AK091309 AX746907 NM_001134658 NM_153226 BC036382 BC058549 BC143283 BC143284 BC104814 BC047102	72392	+	TSC_hg19_v1_chr10_+_95753696 AB040949 BC151854 NM_016341	172366	+	AK297779 AK289852 NM_001165979 AF170071	267483	+	NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1##BC022500|LGI1|9211|leucine-rich, glioma inactivated 1##AF055636|LGI1|9211|leucine-rich, glioma inactivated 1##AF473548|LGI1|9211|leucine-rich, glioma inactivated 1##AK309416|LGI1|9211|leucine-rich, glioma inactivated 1##AY358885|LGI1|9211|leucine-rich, glioma inactivated 1##AK303956|LGI1|9211|leucine-rich, glioma inactivated 1##AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_006204|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##U31973|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##BC111377|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##AK091309|SLC35G1|159371|solute carrier family 35, member G1##NM_001134658|SLC35G1|159371|solute carrier family 35, member G1##NM_153226|SLC35G1|159371|solute carrier family 35, member G1##BC036382|SLC35G1|159371|solute carrier family 35, member G1##BC143284|SLC35G1|159371|solute carrier family 35, member G1##BC104814|SLC35G1|159371|solute carrier family 35, member G1##BC047102|SLC35G1|159371|solute carrier family 35, member G1##AB040949|PLCE1|51196|phospholipase C, epsilon 1##BC151854|PLCE1|51196|phospholipase C, epsilon 1##NM_016341|PLCE1|51196|phospholipase C, epsilon 1##AK297779|PLCE1|51196|phospholipase C, epsilon 1##AK289852|PLCE1|51196|phospholipase C, epsilon 1##NM_001165979|PLCE1|51196|phospholipase C, epsilon 1##AF170071|PLCE1|51196|phospholipase C, epsilon 1	0.228341	CTCF.p2:-17:0.228
chr1	209609190	209609288	reg1024508.p1	6.055	+	AK091113 AX746785 NM_001104548	-7074	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-1191590	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-1524682	-	NM_020439 AK095713 AK289675 AF428261 BC032787	147821	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	215440	-	L25541 NM_001127641 D37766 TSC_hg19_v1_chr1_-_209825771 AK296851 AK309524	216485	-	NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3##L25541|LAMB3|3914|laminin, beta 3##NM_001127641|LAMB3|3914|laminin, beta 3##D37766|LAMB3|3914|laminin, beta 3##AK296851|LAMB3|3914|laminin, beta 3##AK309524|LAMB3|3914|laminin, beta 3	0.03521	
chr12	117593129	117593281	reg1023895.p2	6.055	+	DQ894644 TSC_hg19_v1_chr12_-_117537222 AF443207 BC015221 NM_001168325 NM_017899 AK000614	-55942	-	TSC_hg19_v1_chr12_+_117348781 BC037296 NM_012174 NM_153348 AK289621 AF176707 BC075823	-244419	+	NM_003806 U76376	-273974	-	AL136899 TSC_hg19_v1_chr12_-_117628277 BC091496 AF174601 AB020682 AK001699 AK314573 BC034045 BC042333 AK308141 NM_015002 NM_033624	35020	-	NM_001204213	149651	-	NM_001204214	154009	-	DQ894644|TESC|54997|tescalcin##AF443207|TESC|54997|tescalcin##BC015221|TESC|54997|tescalcin##NM_001168325|TESC|54997|tescalcin##NM_017899|TESC|54997|tescalcin##AK000614|TESC|54997|tescalcin##BC037296|FBXW8|26259|F-box and WD repeat domain containing 8##NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8##NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8##AK289621|FBXW8|26259|F-box and WD repeat domain containing 8##AF176707|FBXW8|26259|F-box and WD repeat domain containing 8##NM_003806|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##U76376|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##AL136899|FBXO21|23014|F-box protein 21##BC091496|FBXO21|23014|F-box protein 21##AF174601|FBXO21|23014|F-box protein 21##AB020682|FBXO21|23014|F-box protein 21##AK001699|FBXO21|23014|F-box protein 21##AK314573|FBXO21|23014|F-box protein 21##BC034045|FBXO21|23014|F-box protein 21##BC042333|FBXO21|23014|F-box protein 21##AK308141|FBXO21|23014|F-box protein 21##NM_015002|FBXO21|23014|F-box protein 21##NM_033624|FBXO21|23014|F-box protein 21##NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)	0.115287	
chr1	37562309	37562394	reg1016902.p1	6.055	+	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	-62576	-	NM_000760 NM_156039 NM_172313	-613437	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-613867	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	377746	+	TSC_hg19_v1_chr1_+_37940140 AK026884	377799	+	FJ695517 TSC_hg19_v1_chr1_+_37940180 AK093343 AX748065 BC005001	377836	+	AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A##FJ695517|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK093343|ZC3H12A|80149|zinc finger CCCH-type containing 12A##BC005001|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.072861	
chr20	40833062	40833160	reg1020758.p1	6.055	+	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-586050	-	AB089149 NM_052846	-837614	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	-863596	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	985399	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	1253381	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	1253492	+	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3##AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6	0.998801	CTCF.p2:-4:0.999
chr8	105789116	105789244	reg1018473.p1	6.055	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-187933	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-188005	-	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	-309965	-	AF119334 BC109222 BC109223 NM_012082	541966	+	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	1493243	+	AK296561 NM_001198532	1670971	+	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1	0.456335	CTCF.p2:18:0.456
chr9	111716398	111716501	reg1024179.p2	6.055	+	TSC_hg19_v1_chr9_+_111696741 BC051827 AF153417 CU677447	-19703	+	TSC_hg19_v1_chr9_+_111696715 AK310297	-19735	+	NM_017832 TSC_hg19_v1_chr9_+_111696705 AK000464	-19760	+	AB451283 AB451415 HQ258655 TSC_hg19_v1_chr9_-_111775780 BC117208 BC117234 AF080071 AF006070 AF135021 NM_003798 U97067 AF030233 AK314677 AK022926 AK223230 AK022834	59319	-	TSC_hg19_v1_chr9_-_111882206 AK299952	165756	-	TSC_hg19_v1_chr9_-_111882212 BC142984 AF153415 NM_032012	165771	-	BC051827|FAM206A|54942|family with sequence similarity 206, member A##AF153417|FAM206A|54942|family with sequence similarity 206, member A##AK310297|FAM206A|54942|family with sequence similarity 206, member A##NM_017832|FAM206A|54942|family with sequence similarity 206, member A##AK000464|FAM206A|54942|family with sequence similarity 206, member A##AB451283|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AB451415|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##HQ258655|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##BC117208|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##BC117234|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AF080071|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AF006070|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AF135021|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##NM_003798|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##U97067|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AF030233|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AK314677|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AK022926|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AK223230|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AK022834|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AK299952|C9orf5|23731|chromosome 9 open reading frame 5##AF153415|C9orf5|23731|chromosome 9 open reading frame 5##NM_032012|C9orf5|23731|chromosome 9 open reading frame 5	0.975571	CTCF.p2:3:0.976
chr17	47368201	47368344	reg1026005.p1	6.054	+	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	-60129	-	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-80195	+	NM_001198754	-80337	-	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	71308	-	BC095460 TSC_hg19_v1_chr17_-_47492215	123943	-	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	123976	-	BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC095460|PHB|5245|prohibitin##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin	0.383926	CTCF.p2:2:0.384
chr6	100353524	100353655	reg1018972.p1	6.054	+	AY004253 NM_021620	-298940	+	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	-336986	-	CU679631 CU691126 AB528579 AB125137 BC050726 TSC_hg19_v1_chr6_-_100016505 AK223247 M74091 AK291914 AK222768 BC026272 BC030159 BC056153	-337132	-	AK123634 NM_001040179 NM_032503 AF347063	88521	-	NM_005068 U70212	557961	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	975511	-	AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##AB125137|CCNC|892|cyclin C##BC050726|CCNC|892|cyclin C##AK223247|CCNC|892|cyclin C##M74091|CCNC|892|cyclin C##AK291914|CCNC|892|cyclin C##AK222768|CCNC|892|cyclin C##BC026272|CCNC|892|cyclin C##BC030159|CCNC|892|cyclin C##BC056153|CCNC|892|cyclin C##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.056102	
chr1	146408004	146408108	reg1023335.p1	6.053	+	BC136292 NM_183372 AL832622	-325358	-	AF419617 NM_001101663	-339812	-	NM_001097616	-524189	+	AJ224538 HQ257946 TSC_hg19_v1_chr1_-_146643798	235709	-	AK316005 AK292820 AK304069 AK310982 BC053610 NM_005399 AK294863 AK316183	236036	-	AK295985 TSC_hg19_v1_chr1_+_146649617	241524	+	BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##AF419617|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_001101663|NBPF24|728912|neuroblastoma breakpoint family, member 24##NM_001097616|GPR89C|728932|G protein-coupled receptor 89C##AJ224538|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##HQ257946|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316005|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK292820|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK304069|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK310982|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##BC053610|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##NM_005399|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK294863|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##AK316183|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	0.968636	CTCF.p2:15:0.969
chr19	45414575	45414713	reg1024291.p2	6.053	+	TSC_hg19_v1_chr19_+_45409052 NM_000041 AK308546 AK314898 M12529 K00396 BC003557 Z70760	-5592	+	TSC_hg19_v1_chr19_+_45394661 AF316402 DQ892938 DQ896187 CU674884 AF316401	-19918	+	TSC_hg19_v1_chr19_+_45394570 BC017224	-20073	+	AF308154 AF308155 BC055093 AK225971 TSC_hg19_v1_chr19_+_45417581	2934	+	NM_001645 TSC_hg19_v1_chr19_+_45417961 AK312036	3300	+	TSC_hg19_v1_chr19_+_45418068 BC009698 AB528369 AM392727 GQ129384 GQ129385 BT007142 CR456907	3461	+	NM_000041|APOE|348|apolipoprotein E##AK314898|APOE|348|apolipoprotein E##M12529|APOE|348|apolipoprotein E##K00396|APOE|348|apolipoprotein E##BC003557|APOE|348|apolipoprotein E##Z70760|APOE|348|apolipoprotein E##AF316402|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##DQ892938|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##DQ896187|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##AF316401|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##BC017224|TOMM40|10452|translocase of outer mitochondrial membrane 40 homolog (yeast)##BC055093|APOC1|341|apolipoprotein C-I##AK225971|APOC1|341|apolipoprotein C-I##NM_001645|APOC1|341|apolipoprotein C-I##AK312036|APOC1|341|apolipoprotein C-I##BC009698|APOC1|341|apolipoprotein C-I##AM392727|APOC1|341|apolipoprotein C-I##GQ129384|APOC1|341|apolipoprotein C-I##GQ129385|APOC1|341|apolipoprotein C-I##BT007142|APOC1|341|apolipoprotein C-I##CR456907|APOC1|341|apolipoprotein C-I	0.0	
chr6	153275735	153275838	reg1023716.p1	6.053	+	AK313950 BC009794 NM_003381 NM_194435 AK291959 M36634	-203800	+	NM_025107 AF527367 AK024922 BC128463 BC128464 GU997693 AK021612 BC022556 AL834500 CU692694	-256681	+	AF495910 NM_182961	-317253	-	AY079515 DQ891922 DQ895106 BC018905 AF129535 TSC_hg19_v1_chr6_-_153304175 AK026197 AK314456 NM_012177	28361	-	AJ420499 TSC_hg19_v1_chr6_-_153304715 AK055221 NM_001142522	28878	-	TSC_hg19_v1_chr6_-_153323825 AK027684 CU676987 CU680090 AK001037 AK225321 AK225970 AK290662 BC014428	48026	-	AK313950|VIP|7432|vasoactive intestinal peptide##BC009794|VIP|7432|vasoactive intestinal peptide##NM_003381|VIP|7432|vasoactive intestinal peptide##NM_194435|VIP|7432|vasoactive intestinal peptide##AK291959|VIP|7432|vasoactive intestinal peptide##M36634|VIP|7432|vasoactive intestinal peptide##NM_025107|MYCT1|80177|myc target 1##AF527367|MYCT1|80177|myc target 1##AK024922|MYCT1|80177|myc target 1##BC128463|MYCT1|80177|myc target 1##BC128464|MYCT1|80177|myc target 1##GU997693|MYCT1|80177|myc target 1##AK021612|MYCT1|80177|myc target 1##BC022556|MYCT1|80177|myc target 1##AL834500|MYCT1|80177|myc target 1##AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AY079515|FBXO5|26271|F-box protein 5##DQ891922|FBXO5|26271|F-box protein 5##DQ895106|FBXO5|26271|F-box protein 5##BC018905|FBXO5|26271|F-box protein 5##AF129535|FBXO5|26271|F-box protein 5##AK026197|FBXO5|26271|F-box protein 5##AK314456|FBXO5|26271|F-box protein 5##NM_012177|FBXO5|26271|F-box protein 5##AJ420499|FBXO5|26271|F-box protein 5##AK055221|FBXO5|26271|F-box protein 5##NM_001142522|FBXO5|26271|F-box protein 5##AK027684|MTRF1L|54516|mitochondrial translational release factor 1-like##AK225321|MTRF1L|54516|mitochondrial translational release factor 1-like##AK225970|MTRF1L|54516|mitochondrial translational release factor 1-like##AK290662|MTRF1L|54516|mitochondrial translational release factor 1-like##BC014428|MTRF1L|54516|mitochondrial translational release factor 1-like	0.894657	CTCF.p2:-12:0.895
chrX	69482940	69483056	reg1021681.p1	6.053	+	BC096067 BC096068 BC096069 BC096070 BC095503 NM_002565	-3414	-	NM_001013579 AB528120 AY947638	-28474	+	AK129500 NM_198512	-85663	+	BC012096 NM_004312 AF033105	5179	+	BC117239 BC143888 NM_001032726	19023	+	TSC_hg19_v1_chrX_-_69509768 BC012996 AY358829 AK024746 AK311539 AF151061 NM_016484 BX537725	26794	-	BC096067|P2RY4|5030|pyrimidinergic receptor P2Y, G-protein coupled, 4##BC096068|P2RY4|5030|pyrimidinergic receptor P2Y, G-protein coupled, 4##BC096069|P2RY4|5030|pyrimidinergic receptor P2Y, G-protein coupled, 4##BC096070|P2RY4|5030|pyrimidinergic receptor P2Y, G-protein coupled, 4##BC095503|P2RY4|5030|pyrimidinergic receptor P2Y, G-protein coupled, 4##NM_002565|P2RY4|5030|pyrimidinergic receptor P2Y, G-protein coupled, 4##NM_001013579|AWAT1|158833|acyl-CoA wax alcohol acyltransferase 1##AY947638|AWAT1|158833|acyl-CoA wax alcohol acyltransferase 1##AK129500|DGAT2L6|347516|diacylglycerol O-acyltransferase 2-like 6##NM_198512|DGAT2L6|347516|diacylglycerol O-acyltransferase 2-like 6##BC012096|ARR3|407|arrestin 3, retinal (X-arrestin)##NM_004312|ARR3|407|arrestin 3, retinal (X-arrestin)##AF033105|ARR3|407|arrestin 3, retinal (X-arrestin)##BC117239|RAB41|347517|RAB41, member RAS oncogene family##BC143888|RAB41|347517|RAB41, member RAS oncogene family##NM_001032726|RAB41|347517|RAB41, member RAS oncogene family##BC012996|PDZD11|51248|PDZ domain containing 11##AY358829|PDZD11|51248|PDZ domain containing 11##AK024746|PDZD11|51248|PDZ domain containing 11##AK311539|PDZD11|51248|PDZ domain containing 11##AF151061|PDZD11|51248|PDZ domain containing 11##NM_016484|PDZD11|51248|PDZ domain containing 11##BX537725|PDZD11|51248|PDZ domain containing 11	0.21692	CTCF.p2:25:0.217
chr15	54774123	54774268	reg1021835.p1	6.052	+	NM_001080534	-469095	+	AK096055 BX537884 NM_182758	-722348	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-1692001	-	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	714897	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	714984	-	AF125393 NM_183234 U57094 U38654 NM_004580	788342	-	NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family	0.0	
chr16	11421278	11421459	reg1024405.p2	6.052	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-46226	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	-51048	-	NM_021247	-53917	-	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	17926	+	TSC_hg19_v1_chr16_+_11439315 BC013040	17950	+	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	258819	-	BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2##NM_021247|PRM3|58531|protamine 3##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor	0.0	
chr17	30228782	30228906	reg1024693.p1	6.052	+	TSC_hg19_v1_chr17_-_30228769 AK299806	-80	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	-113	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	-178	-	TSC_hg19_v1_chr17_+_30264046 NM_015355	35199	+	TSC_hg19_v1_chr17_+_30264057 AK290014	35213	+	TSC_hg19_v1_chr17_+_30264067 D63881 BC018583	35231	+	AK299806|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_015355|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)##AK290014|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)##D63881|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)##BC018583|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)	0.0	
chr17	43930188	43930312	reg1027883.p1	6.052	+	BC025401 NM_175882 BC022041	-7994	+	BC037967 HM852949 TSC_hg19_v1_chr17_+_43861685 X72304	-68572	+	TSC_hg19_v1_chr17_+_43861628 NM_001145146 NM_001145147 NM_001145148 NM_004382	-68614	+	TSC_hg19_v1_chr17_+_43971655 NM_001123066 NM_001123067 NM_001203251 NM_001203252 NM_005910 NM_016834 NM_016835 NM_016841	41451	+	TSC_hg19_v1_chr17_+_43971919 AK095802 AK299658 AK299704	41676	+	BC000558 TSC_hg19_v1_chr17_+_43972002	41752	+	BC025401|IMP5|162540|intramembrane protease 5##NM_175882|IMP5|162540|intramembrane protease 5##BC022041|IMP5|162540|intramembrane protease 5##BC037967|CRHR1|1394|corticotropin releasing hormone receptor 1##X72304|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145146|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145147|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145148|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_004382|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001123066|MAPT|4137|microtubule-associated protein tau##NM_001123067|MAPT|4137|microtubule-associated protein tau##NM_001203251|MAPT|4137|microtubule-associated protein tau##NM_001203252|MAPT|4137|microtubule-associated protein tau##NM_005910|MAPT|4137|microtubule-associated protein tau##NM_016834|MAPT|4137|microtubule-associated protein tau##NM_016835|MAPT|4137|microtubule-associated protein tau##NM_016841|MAPT|4137|microtubule-associated protein tau##AK095802|MAPT|4137|microtubule-associated protein tau##AK299658|MAPT|4137|microtubule-associated protein tau##AK299704|MAPT|4137|microtubule-associated protein tau##BC000558|MAPT|4137|microtubule-associated protein tau	0.999836	CTCF.p2:1:1.000
chr13	30733029	30733145	reg1023083.p1	6.051	+	TSC_hg19_v1_chr13_-_30424811 NM_007106	-308246	-	TSC_hg19_v1_chr13_-_30424719 AK056580	-308385	-	BC059385 BC044582 TSC_hg19_v1_chr13_-_30424481	-308681	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	148064	-	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	148482	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	306906	-	NM_007106|UBL3|5412|ubiquitin-like 3##AK056580|UBL3|5412|ubiquitin-like 3##BC059385|UBL3|5412|ubiquitin-like 3##BC044582|UBL3|5412|ubiquitin-like 3##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1	0.528507	CTCF.p2:4:0.529
chr2	161209842	161209955	reg1021709.p1	6.051	+	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	-79709	-	AK304203 AL831998 TSC_hg19_v1_chr2_-_161056784 AK290300 AK313944	-153103	-	AB463075 AM393800 M35198 NM_000888 BC121178 BC143656	-153311	-	CU676342 D28482 X77494 AK225887 L11289 TSC_hg19_v1_chr2_-_161350025 AK309949 BC012992 BC012993 AK297812	140061	-	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	140419	-	NM_004180 NM_133484 U59863 U63830	783567	+	BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK304203|ITGB6|3694|integrin, beta 6##AL831998|ITGB6|3694|integrin, beta 6##AK290300|ITGB6|3694|integrin, beta 6##AK313944|ITGB6|3694|integrin, beta 6##AM393800|ITGB6|3694|integrin, beta 6##M35198|ITGB6|3694|integrin, beta 6##NM_000888|ITGB6|3694|integrin, beta 6##BC121178|ITGB6|3694|integrin, beta 6##BC143656|ITGB6|3694|integrin, beta 6##D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_004180|TANK|10010|TRAF family member-associated NFKB activator##NM_133484|TANK|10010|TRAF family member-associated NFKB activator##U59863|TANK|10010|TRAF family member-associated NFKB activator##U63830|TANK|10010|TRAF family member-associated NFKB activator	0.0	
chr11	19367965	19368068	reg1020057.p2	6.050	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-104815	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-105541	-	U20324 U72899 U49837 BC057221 NM_001127656 TSC_hg19_v1_chr11_-_19223531 AK313289 NM_003476 AF121260	-144458	-	AB063115 NM_001111018 AJ488205	4299	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	366850	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	676372	+	AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##U20324|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U72899|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U49837|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##BC057221|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_001127656|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AK313289|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_003476|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AF121260|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2	0.0	
chr15	40180112	40180248	reg1023775.p2	6.050	+	AK091251 TSC_hg19_v1_chr15_+_40075106	-105074	+	AK093308 AX748045 BC045191 NM_152597	-105152	-	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	-306851	+	CU688250 TSC_hg19_v1_chr15_-_40212342	32105	-	BC067106 TSC_hg19_v1_chr15_-_40212465	32308	-	TSC_hg19_v1_chr15_-_40213138 D38449 NM_007223	32947	-	AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##BC067106|GPR176|11245|G protein-coupled receptor 176##D38449|GPR176|11245|G protein-coupled receptor 176##NM_007223|GPR176|11245|G protein-coupled receptor 176	0.926551	CTCF.p2:-13:0.927
chr2	103136610	103136715	reg1022231.p2	6.050	+	CR627411 NM_001011552	-46901	+	AK300026 AF077346 NM_003853	-101462	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	-157554	+	BC136377 BC136378 BC035787 NM_003048 AF073299	99521	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	216671	-	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	216720	+	CR627411|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##NM_001011552|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein##AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein##NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1##BC136377|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC136378|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC035787|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##NM_003048|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AF073299|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182	0.476755	CTCF.p2:-13:0.477
chr4	83976251	83976357	reg1021752.p1	6.050	+	NM_016129 AK001148 TSC_hg19_v1_chr4_+_83956368 AK024005 BC093007 AK223178 BC004302 BC009292 AB587420 AF100757 AK001210	-19980	+	TSC_hg19_v1_chr4_-_83934095 AK292769 NM_001115007	-42276	-	AB111889 BX640657 TSC_hg19_v1_chr4_-_83931982 BX640966 NM_001115008 NM_194282	-44310	-	BC012205 NM_001130716	54699	-	AF208846 EU570985 EU570986 TSC_hg19_v1_chr4_-_84035890 AJ422147	59587	-	TSC_hg19_v1_chr4_-_84035912 AK000140 NM_001130715 NM_016619	59623	-	NM_016129|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK001148|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK024005|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC093007|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK223178|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC004302|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC009292|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AF100757|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK001210|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK292769|LIN54|132660|lin-54 homolog (C. elegans)##NM_001115007|LIN54|132660|lin-54 homolog (C. elegans)##AB111889|LIN54|132660|lin-54 homolog (C. elegans)##BX640657|LIN54|132660|lin-54 homolog (C. elegans)##BX640966|LIN54|132660|lin-54 homolog (C. elegans)##NM_001115008|LIN54|132660|lin-54 homolog (C. elegans)##NM_194282|LIN54|132660|lin-54 homolog (C. elegans)##BC012205|PLAC8|51316|placenta-specific 8##NM_001130716|PLAC8|51316|placenta-specific 8##AF208846|PLAC8|51316|placenta-specific 8##EU570985|PLAC8|51316|placenta-specific 8##EU570986|PLAC8|51316|placenta-specific 8##AJ422147|PLAC8|51316|placenta-specific 8##AK000140|PLAC8|51316|placenta-specific 8##NM_001130715|PLAC8|51316|placenta-specific 8##NM_016619|PLAC8|51316|placenta-specific 8	0.978185	CTCF.p2:-3:0.978
chr4	85892617	85892760	reg1028694.p1	6.050	+	NM_014991	-5145	-	NM_001263 U65887	-388595	+	NM_006168	-473302	-	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	503655	+	TSC_hg19_v1_chr4_+_86699850 NM_001042669	807160	+	BC098580 TSC_hg19_v1_chr4_+_86699865 AK098193	807210	+	NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_006168|NKX6-1|4825|NK6 homeobox 1##NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24##NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24##BC098580|ARHGAP24|83478|Rho GTPase activating protein 24##AK098193|ARHGAP24|83478|Rho GTPase activating protein 24	0.988713	CTCF.p2:-3:0.989
chr11	110318809	110318910	reg1022709.p1	6.049	+	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	-18143	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	-151546	-	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	-354729	+	AY496266 TSC_hg19_v1_chr11_-_110582834	263944	-	TSC_hg19_v1_chr11_-_110582887 AB037812	264066	-	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	264426	-	NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20##AB037812|ARHGAP20|57569|Rho GTPase activating protein 20##AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20	0.913536	CTCF.p2:-19:0.914
chr16	13833955	13834061	reg1025326.p1	6.049	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-838540	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-936289	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-936357	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	180023	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	331078	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	446510	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.830069	CTCF.p2:-2:0.830
chr18	25769479	25769598	reg1019125.p1	6.049	+	TSC_hg19_v1_chr18_-_25757363 NM_001792	-12141	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	-12501	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-1004305	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	2853164	-	CR749226 TSC_hg19_v1_chr18_-_28681542	2911950	-	TSC_hg19_v1_chr18_-_28682275 EF017811 EF017812 X56807 AK297029 AK290313 BX648425 BC063291 NM_004949 NM_024422	2912653	-	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3##CR749226|DSC2|1824|desmocollin 2##EF017811|DSC2|1824|desmocollin 2##EF017812|DSC2|1824|desmocollin 2##X56807|DSC2|1824|desmocollin 2##AK297029|DSC2|1824|desmocollin 2##AK290313|DSC2|1824|desmocollin 2##BX648425|DSC2|1824|desmocollin 2##BC063291|DSC2|1824|desmocollin 2##NM_004949|DSC2|1824|desmocollin 2##NM_024422|DSC2|1824|desmocollin 2	0.682779	CTCF.p2:28:0.683
chr12	133138543	133138646	reg1014762.p3	6.048	+	NM_001142641	-71438	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-232737	-	AF458594 NM_021808	-448022	-	NM_001195520	48442	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	56810	+	BC021559 TSC_hg19_v1_chr12_-_133215909	77248	-	NM_001142641|FBRSL1|57666|fibrosin-like 1##BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC021559|POLE|5426|polymerase (DNA directed), epsilon	0.997945	CTCF.p2:3:0.998
chr3	190040213	190040361	reg1023639.p1	6.048	+	BC012471 AF114837 AY358652 AF101051 AF134160 AK312866 AK225963 AK296934 TSC_hg19_v1_chr3_-_190040231 NM_021101	-73	-	NM_001134418	-200062	-	NM_018192	-201380	-	AK314955 NM_006580	65373	+	CU687168 BC071780 AY358607 NM_207316	127343	-	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	191590	+	BC012471|CLDN1|9076|claudin 1##AF114837|CLDN1|9076|claudin 1##AY358652|CLDN1|9076|claudin 1##AF101051|CLDN1|9076|claudin 1##AF134160|CLDN1|9076|claudin 1##AK312866|CLDN1|9076|claudin 1##AK296934|CLDN1|9076|claudin 1##NM_021101|CLDN1|9076|claudin 1##NM_001134418|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##AK314955|CLDN16|10686|claudin 16##NM_006580|CLDN16|10686|claudin 16##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207##NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein	0.972571	CTCF.p2:20:0.973
chr16	3144715	3144861	reg1024612.p1	6.047	+	BC114452 AK027455 NM_032805	-1939	-	BC105602 TSC_hg19_v1_chr16_+_3115641 BC018782 NM_001012632 M59807 NM_001012636 AB590933 EU339107 JN546102	-29062	+	AK296143 AK310053 TSC_hg19_v1_chr16_+_3115639	-29149	+	TSC_hg19_v1_chr16_-_3149286 AK074736	4494	-	TSC_hg19_v1_chr16_+_3162586 NM_001042428 NM_003456 AK313009 AF060865 BC002810	17807	+	TSC_hg19_v1_chr16_-_3184862 AF098968	40083	-	BC114452|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AK027455|ZSCAN10|84891|zinc finger and SCAN domain containing 10##NM_032805|ZSCAN10|84891|zinc finger and SCAN domain containing 10##BC105602|IL32|9235|interleukin 32##BC018782|IL32|9235|interleukin 32##NM_001012632|IL32|9235|interleukin 32##M59807|IL32|9235|interleukin 32##NM_001012636|IL32|9235|interleukin 32##EU339107|IL32|9235|interleukin 32##AK296143|IL32|9235|interleukin 32##AK310053|IL32|9235|interleukin 32##AK074736|ZSCAN10|84891|zinc finger and SCAN domain containing 10##NM_001042428|ZNF205|7755|zinc finger protein 205##NM_003456|ZNF205|7755|zinc finger protein 205##AK313009|ZNF205|7755|zinc finger protein 205##AF060865|ZNF205|7755|zinc finger protein 205##BC002810|ZNF205|7755|zinc finger protein 205	0.389916	CTCF.p2:-17:0.390
chr20	388005	388131	reg1012575.p1	6.047	+	AJ697940 TSC_hg19_v1_chr20_+_361938 AK297546 AJ697937 AJ697938 AJ697939	-26106	+	TSC_hg19_v1_chr20_+_361708 BC019363	-26360	+	AY247738 NM_021158 TSC_hg19_v1_chr20_+_361483 AJ697936 AK026945 AK222837 BC027484	-26655	+	BC014116 TSC_hg19_v1_chr20_+_388711 NM_006462 NM_031229	635	+	TSC_hg19_v1_chr20_+_388727 BC016301 U67322	697	+	TSC_hg19_v1_chr20_+_388942 AK297524 AK309414	882	+	AK297546|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC019363|TRIB3|57761|tribbles homolog 3 (Drosophila)##AY247738|TRIB3|57761|tribbles homolog 3 (Drosophila)##NM_021158|TRIB3|57761|tribbles homolog 3 (Drosophila)##AJ697936|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK026945|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK222837|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC027484|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC014116|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##NM_006462|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##NM_031229|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##BC016301|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##U67322|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##AK297524|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1##AK309414|RBCK1|10616|RanBP-type and C3HC4-type zinc finger containing 1	0.6135	CTCF.p2:-17:0.614
chr2	156922580	156922700	reg1024328.p1	6.047	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-1367451	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-2194196	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-2587389	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	264050	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	266523	-	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	369318	+	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	0.101514	
chr2	201600536	201600667	reg1022241.p1	6.047	+	AK297930 AK307738 TSC_hg19_v1_chr2_+_201474048	-126604	+	AB046692 NM_001159 TSC_hg19_v1_chr2_+_201450748 BC117179 BC117181	-149817	+	TSC_hg19_v1_chr2_+_201450590 AK301052	-150014	+	TSC_hg19_v1_chr2_+_201676291 NM_001207067 NM_014670 AL833518	75685	+	TSC_hg19_v1_chr2_+_201676632 Z70221 AK096489	76013	+	D13630 TSC_hg19_v1_chr2_+_201676645 BC001804	76045	+	AK297930|AOX1|316|aldehyde oxidase 1##AK307738|AOX1|316|aldehyde oxidase 1##AB046692|AOX1|316|aldehyde oxidase 1##NM_001159|AOX1|316|aldehyde oxidase 1##BC117179|AOX1|316|aldehyde oxidase 1##BC117181|AOX1|316|aldehyde oxidase 1##AK301052|AOX1|316|aldehyde oxidase 1##NM_001207067|BZW1|9689|basic leucine zipper and W2 domains 1##NM_014670|BZW1|9689|basic leucine zipper and W2 domains 1##AL833518|BZW1|9689|basic leucine zipper and W2 domains 1##Z70221|BZW1|9689|basic leucine zipper and W2 domains 1##AK096489|BZW1|9689|basic leucine zipper and W2 domains 1##D13630|BZW1|9689|basic leucine zipper and W2 domains 1##BC001804|BZW1|9689|basic leucine zipper and W2 domains 1	0.966717	CTCF.p2:10:0.967
chr2	75660196	75660376	reg1020859.p2	6.047	+	AK289765 NM_001058 NM_015727	-233658	-	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-474501	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-598035	-	BC016157 TSC_hg19_v1_chr2_-_75788066	127761	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	127804	-	AK023453 NM_032181	136561	-	AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A	0.0	
chr6	146250334	146250434	reg1023727.p1	6.047	+	TSC_hg19_v1_chr6_+_146136030 AK311235	-114346	+	TSC_hg19_v1_chr6_-_146135919 NM_032145	-114462	-	TSC_hg19_v1_chr6_-_146135899 BC024326	-114524	-	TSC_hg19_v1_chr6_-_146285189 AY161136	34807	-	TSC_hg19_v1_chr6_-_146285235 AK075318 AY163808 NM_001042683 NM_173082	34866	-	TSC_hg19_v1_chr6_-_146285558 CR749290	35178	-	AK311235|LOC100507557|100507557|uncharacterized LOC100507557##NM_032145|FBXO30|84085|F-box protein 30##BC024326|FBXO30|84085|F-box protein 30##AY161136|SHPRH|257218|SNF2 histone linker PHD RING helicase##AK075318|SHPRH|257218|SNF2 histone linker PHD RING helicase##AY163808|SHPRH|257218|SNF2 histone linker PHD RING helicase##NM_001042683|SHPRH|257218|SNF2 histone linker PHD RING helicase##NM_173082|SHPRH|257218|SNF2 histone linker PHD RING helicase##CR749290|SHPRH|257218|SNF2 histone linker PHD RING helicase	0.976034	CTCF.p2:-10:0.976
chr6	85677217	85677352	reg1023431.p1	6.047	+	HQ258462 NM_001080508 BC157841 BC132715	-203359	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	-204114	-	TSC_hg19_v1_chr6_-_85472330 AJ010278	-204959	-	NM_001204813 NM_002526 TSC_hg19_v1_chr6_+_86159433	482088	+	TSC_hg19_v1_chr6_+_86159827 AK314661 AX772810 X55740 BC015940 AK075008 BC065937 DQ186653	482531	+	BC046520 AY044865 CU686683 TSC_hg19_v1_chr6_-_86303440 BC095419	626109	-	HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18##AJ010278|TBX18|9096|T-box 18##NM_001204813|NT5E|4907|5'-nucleotidase, ecto (CD73)##NM_002526|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK314661|NT5E|4907|5'-nucleotidase, ecto (CD73)##X55740|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC015940|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK075008|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC065937|NT5E|4907|5'-nucleotidase, ecto (CD73)##DQ186653|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC046520|SNX14|57231|sorting nexin 14##AY044865|SNX14|57231|sorting nexin 14##BC095419|SNX14|57231|sorting nexin 14	0.951741	CTCF.p2:18:0.952
chr13	107857797	107857912	reg1021484.p1	6.046	+	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	-637369	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	-670505	-	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-1739263	+	NM_001080396	661605	-	NM_002312 X83441	1009275	-	AK292419 AK314844 BC037491 NM_206937	1010021	-	BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A##NM_002312|LIG4|3981|ligase IV, DNA, ATP-dependent##X83441|LIG4|3981|ligase IV, DNA, ATP-dependent##AK292419|LIG4|3981|ligase IV, DNA, ATP-dependent##AK314844|LIG4|3981|ligase IV, DNA, ATP-dependent##BC037491|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_206937|LIG4|3981|ligase IV, DNA, ATP-dependent	0.999807	CTCF.p2:-7:1.000
chr17	80202313	80202416	reg1023587.p1	6.046	+	NM_001206952	-8715	+	NM_001206951	-9590	+	NM_001042423	-12257	+	TSC_hg19_v1_chr17_-_80231267 AB209463 CU677441 CU678502 EU832350 EU832435 AB527595	28889	-	TSC_hg19_v1_chr17_-_80231315 AB091044 AK296969	28929	-	TSC_hg19_v1_chr17_-_80231580 BC003558 BC015775 AK291758 AK295638 AK303365 NM_001893 NM_139062	29216	-	NM_001206952|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_001206951|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_001042423|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##AB209463|CSNK1D|1453|casein kinase 1, delta##EU832350|CSNK1D|1453|casein kinase 1, delta##EU832435|CSNK1D|1453|casein kinase 1, delta##AB091044|CSNK1D|1453|casein kinase 1, delta##AK296969|CSNK1D|1453|casein kinase 1, delta##BC003558|CSNK1D|1453|casein kinase 1, delta##BC015775|CSNK1D|1453|casein kinase 1, delta##AK291758|CSNK1D|1453|casein kinase 1, delta##AK295638|CSNK1D|1453|casein kinase 1, delta##AK303365|CSNK1D|1453|casein kinase 1, delta##NM_001893|CSNK1D|1453|casein kinase 1, delta##NM_139062|CSNK1D|1453|casein kinase 1, delta	0.509992	CTCF.p2:-7:0.510
chr3	172393524	172393677	reg1024150.p1	6.046	+	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	-152422	-	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	-227377	-	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-635263	+	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	35290	-	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	74924	+	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	78702	+	AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene	0.395148	CTCF.p2:-27:0.395
chr5	90937724	90937814	reg1021388.p2	6.046	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-258637	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-261607	+	AK091866 TSC_hg19_v1_chr5_-_90610220	-327524	-	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	1979194	-	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	1981214	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	1982899	+	BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	0.99677	CTCF.p2:-4:0.997
chr9	132647427	132647555	reg1017615.p3	6.046	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-49726	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-49769	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-49807	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	157863	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	157997	-	BC039728 NM_001136557 NM_001136558 NM_020960	168493	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.597656	CTCF.p2:13:0.598
chr9	44500338	44500454	reg1026818.p1	6.046	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-815553	+	NM_001145196	-869667	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-1366909	-	TSC_hg19_v1_chr9_+_45441926 BC006438	941530	+	BC040528 NM_001113541 NM_015667	21009213	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	21956905	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.415484	CTCF.p2:11:0.415
chr10	74057170	74057351	reg1017193.p2	6.045	+	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-23436	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-81149	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-81472	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	57418	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	57666	-	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	226459	-	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1	0.029453	
chr21	19667638	19667777	reg1023570.p2	6.045	+	AK296009 NM_001204174	-49516	+	TSC_hg19_v1_chr21_+_19617149 AF257472 NM_024944 AY358608 BC009418	-50545	+	AF523314 AF523315 NM_001204175 NM_001204176 NM_001204177 NM_001204178 AF523313	-378051	+	BC111749 NM_002772 U09860	108258	-	TSC_hg19_v1_chr21_+_22370656 BC052946 NM_004540	2702935	+	TSC_hg19_v1_chr21_+_22370694 AK299054	2702983	+	AK296009|CHODL|140578|chondrolectin##NM_001204174|CHODL|140578|chondrolectin##AF257472|CHODL|140578|chondrolectin##NM_024944|CHODL|140578|chondrolectin##AY358608|CHODL|140578|chondrolectin##BC009418|CHODL|140578|chondrolectin##AF523314|CHODL|140578|chondrolectin##AF523315|CHODL|140578|chondrolectin##NM_001204175|CHODL|140578|chondrolectin##NM_001204176|CHODL|140578|chondrolectin##NM_001204177|CHODL|140578|chondrolectin##NM_001204178|CHODL|140578|chondrolectin##AF523313|CHODL|140578|chondrolectin##BC111749|TMPRSS15|5651|transmembrane protease, serine 15##NM_002772|TMPRSS15|5651|transmembrane protease, serine 15##U09860|TMPRSS15|5651|transmembrane protease, serine 15##BC052946|NCAM2|4685|neural cell adhesion molecule 2##NM_004540|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2	0.093785	
chr8	122273223	122273370	reg1022327.p1	6.045	+	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-448790	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-449026	-	TSC_hg19_v1_chr8_-_121824090 AB590740	-449233	-	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	380330	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	1520615	+	BC042145 TSC_hg19_v1_chr8_+_123794000	1520698	+	NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2	0.020645	
chr8	87056458	87056578	reg1022909.p1	6.045	+	NM_172239	-267213	-	NM_172239	-480793	-	NM_000067 AF015039 TSC_hg19_v1_chr8_+_86376232 AK312978 BC011949 J03037 Y00339 M36532 DQ891320 DQ894504 AB591010 CU680124 CR536526 CR541875	-680298	+	AY037806 HQ258398 NM_033126 BC126180 BC126182 BC144195	25369	-	BC065207 TSC_hg19_v1_chr8_+_87111138 AK096027 NM_152565 AY079172	54626	+	AJ417661 BC125165 BC125166 AK055815 NM_138817 BC029436	186040	-	NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1##NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1##NM_000067|CA2|760|carbonic anhydrase II##AF015039|CA2|760|carbonic anhydrase II##AK312978|CA2|760|carbonic anhydrase II##BC011949|CA2|760|carbonic anhydrase II##J03037|CA2|760|carbonic anhydrase II##Y00339|CA2|760|carbonic anhydrase II##M36532|CA2|760|carbonic anhydrase II##DQ891320|CA2|760|carbonic anhydrase II##DQ894504|CA2|760|carbonic anhydrase II##CR536526|CA2|760|carbonic anhydrase II##CR541875|CA2|760|carbonic anhydrase II##AY037806|PSKH2|85481|protein serine kinase H2##HQ258398|PSKH2|85481|protein serine kinase H2##NM_033126|PSKH2|85481|protein serine kinase H2##BC126180|PSKH2|85481|protein serine kinase H2##BC126182|PSKH2|85481|protein serine kinase H2##BC144195|PSKH2|85481|protein serine kinase H2##BC065207|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AK096027|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##NM_152565|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AY079172|ATP6V0D2|245972|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d2##AJ417661|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC125165|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC125166|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##AK055815|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##NM_138817|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13##BC029436|SLC7A13|157724|solute carrier family 7 (anionic amino acid transporter), member 13	0.234393	CTCF.p2:-16:0.234
chr13	79380738	79380848	reg1024046.p1	6.044	+	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	-147500	-	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	-203070	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	-210511	+	BX648672 BC111697 BC111739 BC041655 NM_022118 TSC_hg19_v1_chr13_-_79979967 AK302871	599161	-	BC030806 TSC_hg19_v1_chr13_-_79980382	599590	-	TSC_hg19_v1_chr13_+_79980440 AK002196 BC034812	599658	+	AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##BX648672|RBM26|64062|RNA binding motif protein 26##BC111697|RBM26|64062|RNA binding motif protein 26##BC111739|RBM26|64062|RNA binding motif protein 26##BC041655|RBM26|64062|RNA binding motif protein 26##NM_022118|RBM26|64062|RNA binding motif protein 26##AK302871|RBM26|64062|RNA binding motif protein 26##BC030806|RBM26|64062|RNA binding motif protein 26##AK002196|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)##BC034812|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)	0.0	
chr19	6280281	6280403	reg1017217.p1	6.044	+	TSC_hg19_v1_chr19_-_6279967 D14539 NM_005934	-377	-	AB463904 TSC_hg19_v1_chr19_-_6279803	-539	-	TSC_hg19_v1_chr19_-_6199558 AK056073	-80795	-	AF347024 BC112122 BC112124 NM_133492	53258	-	BC002956 NM_006012 TSC_hg19_v1_chr19_+_6361541	81159	+	TSC_hg19_v1_chr19_+_6361559 AK311973 Z50853 EF036491 DQ895823 EU176368	81271	+	D14539|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1##NM_005934|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1##AF347024|ACER1|125981|alkaline ceramidase 1##BC112122|ACER1|125981|alkaline ceramidase 1##BC112124|ACER1|125981|alkaline ceramidase 1##NM_133492|ACER1|125981|alkaline ceramidase 1##BC002956|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##NM_006012|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##AK311973|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##Z50853|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##EF036491|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##DQ895823|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##EU176368|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)	0.955276	CTCF.p2:-55:0.955
chr4	187071215	187071396	reg1023949.p2	6.044	+	NM_001006655 AF173894	-947	+	NM_015398 TSC_hg19_v1_chr4_+_187065998 BC142992 BC110816	-5260	+	BC017954 NM_003265 AK314208 BC068487 BC094737 TSC_hg19_v1_chr4_+_186990309 BC059372 BC096333 BC096334 BC096335 DQ445682 U88879	-80976	+	TSC_hg19_v1_chr4_+_187112641 AY422002 NM_207352	41355	+	TSC_hg19_v1_chr4_+_187112832 BC035933 BC060857	41497	+	TSC_hg19_v1_chr4_+_187112938 AK122600 AK126473 BC048253 AY358619 CU687474	41665	+	NM_001006655|FAM149A|25854|family with sequence similarity 149, member A##AF173894|FAM149A|25854|family with sequence similarity 149, member A##NM_015398|FAM149A|25854|family with sequence similarity 149, member A##BC142992|FAM149A|25854|family with sequence similarity 149, member A##BC110816|FAM149A|25854|family with sequence similarity 149, member A##BC017954|TLR3|7098|toll-like receptor 3##NM_003265|TLR3|7098|toll-like receptor 3##AK314208|TLR3|7098|toll-like receptor 3##BC068487|TLR3|7098|toll-like receptor 3##BC094737|TLR3|7098|toll-like receptor 3##BC059372|TLR3|7098|toll-like receptor 3##BC096333|TLR3|7098|toll-like receptor 3##BC096334|TLR3|7098|toll-like receptor 3##BC096335|TLR3|7098|toll-like receptor 3##DQ445682|TLR3|7098|toll-like receptor 3##U88879|TLR3|7098|toll-like receptor 3##AY422002|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##NM_207352|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##BC035933|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##BC060857|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##AK122600|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##AK126473|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##BC048253|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##AY358619|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2	0.0	
chr9	21253117	21253242	reg1021149.p1	6.044	+	BC104159 BC104160 BC074956 NM_002172 V00542	-13197	-	M71246 BC096732 BC098355 M11026 NM_021268 M38289	-24957	-	AB463792 M28585 NM_002173 X00140	-35873	-	BC093755 BC093757 NM_002169	52132	-	BX538121 BC064958 TSC_hg19_v1_chr9_-_21335388 AB037775 AL713669 BC039133 AK091715 AY172949 NM_018847	82154	-	AB590746 BC069471 BC096697 BC096710 BC096730 BC098357 NM_021002	97706	-	BC104159|IFNA14|3448|interferon, alpha 14##BC104160|IFNA14|3448|interferon, alpha 14##BC074956|IFNA14|3448|interferon, alpha 14##NM_002172|IFNA14|3448|interferon, alpha 14##V00542|IFNA14|3448|interferon, alpha 14##M71246|IFNA17|3451|interferon, alpha 17##BC096732|IFNA17|3451|interferon, alpha 17##BC098355|IFNA17|3451|interferon, alpha 17##M11026|IFNA17|3451|interferon, alpha 17##NM_021268|IFNA17|3451|interferon, alpha 17##M38289|IFNA17|3451|interferon, alpha 17##M28585|IFNA16|3449|interferon, alpha 16##NM_002173|IFNA16|3449|interferon, alpha 16##X00140|IFNA16|3449|interferon, alpha 16##BC093755|IFNA5|3442|interferon, alpha 5##BC093757|IFNA5|3442|interferon, alpha 5##NM_002169|IFNA5|3442|interferon, alpha 5##BX538121|KLHL9|55958|kelch-like 9 (Drosophila)##BC064958|KLHL9|55958|kelch-like 9 (Drosophila)##AB037775|KLHL9|55958|kelch-like 9 (Drosophila)##AL713669|KLHL9|55958|kelch-like 9 (Drosophila)##BC039133|KLHL9|55958|kelch-like 9 (Drosophila)##AK091715|KLHL9|55958|kelch-like 9 (Drosophila)##AY172949|KLHL9|55958|kelch-like 9 (Drosophila)##NM_018847|KLHL9|55958|kelch-like 9 (Drosophila)##BC069471|IFNA6|3443|interferon, alpha 6##BC096697|IFNA6|3443|interferon, alpha 6##BC096710|IFNA6|3443|interferon, alpha 6##BC096730|IFNA6|3443|interferon, alpha 6##BC098357|IFNA6|3443|interferon, alpha 6##NM_021002|IFNA6|3443|interferon, alpha 6	0.982766	CTCF.p2:3:0.983
chr11	108518895	108519075	reg1000362.p1	6.043	+	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	-54581	-	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	-149790	-	BC059411 BC029536 AK303096 NM_152587	-180743	-	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	16829	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	773858	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	773914	+	BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5##AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC029536|C11orf65|160140|chromosome 11 open reading frame 65##AK303096|C11orf65|160140|chromosome 11 open reading frame 65##NM_152587|C11orf65|160140|chromosome 11 open reading frame 65##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87	0.0	
chr11	8350442	8350565	reg1023119.p1	6.043	+	BC069752 BC069793 M26682 NM_002315	-65151	-	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	-159940	-	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-247704	+	AK093251 AX748014 BC031231 NM_030906	264954	-	AK293193 TSC_hg19_v1_chr11_-_8615705	265200	-	TSC_hg19_v1_chr11_-_8615752 AK092720 AX747689 AK310754	265272	-	BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33##AK293193|STK33|65975|serine/threonine kinase 33##AK092720|STK33|65975|serine/threonine kinase 33##AK310754|STK33|65975|serine/threonine kinase 33	0.986705	CTCF.p2:-8:0.987
chr1	205557934	205558067	reg1021901.p1	6.043	+	BC036549 AK091896 AX747240 TSC_hg19_v1_chr1_+_205538184 AK304120 AK090831 AX746641 AK295148	-19787	+	AK293816 NM_181644 TSC_hg19_v1_chr1_+_205538141	-19873	+	AY353237 AY353240 TSC_hg19_v1_chr1_+_205473802 AY353238 BC011526 AY353239	-84178	+	BC063676 M85164 M85165 TSC_hg19_v1_chr1_-_205601025 BC040145	42906	-	NM_001973 NM_021795	43999	-	BC050416 AY033593 TSC_hg19_v1_chr1_-_205649588	91568	-	BC036549|MFSD4|148808|major facilitator superfamily domain containing 4##AK091896|MFSD4|148808|major facilitator superfamily domain containing 4##AK304120|MFSD4|148808|major facilitator superfamily domain containing 4##AK090831|MFSD4|148808|major facilitator superfamily domain containing 4##AK295148|MFSD4|148808|major facilitator superfamily domain containing 4##AK293816|MFSD4|148808|major facilitator superfamily domain containing 4##NM_181644|MFSD4|148808|major facilitator superfamily domain containing 4##AY353237|CDK18|5129|cyclin-dependent kinase 18##AY353240|CDK18|5129|cyclin-dependent kinase 18##AY353238|CDK18|5129|cyclin-dependent kinase 18##BC011526|CDK18|5129|cyclin-dependent kinase 18##AY353239|CDK18|5129|cyclin-dependent kinase 18##BC063676|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85164|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85165|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC040145|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##NM_001973|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##NM_021795|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC050416|SLC45A3|85414|solute carrier family 45, member 3##AY033593|SLC45A3|85414|solute carrier family 45, member 3	0.954268	CTCF.p2:2:0.954
chr17	4278408	4278588	reg1020446.p1	6.043	+	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	-8590	-	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	-8787	-	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	-111347	-	AK172832 NM_182538 TSC_hg19_v1_chr17_+_4337247 BC023646	58744	+	NM_001124758 BC041772 TSC_hg19_v1_chr17_+_4402177 AB441165	123738	+	EU832503 BC050546 TSC_hg19_v1_chr17_-_4458680 AF147709 AK303150 AK301622 AK307948 NM_001105538 NM_014520	180176	-	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK172832|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_182538|SPNS3|201305|spinster homolog 3 (Drosophila)##BC023646|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_001124758|SPNS2|124976|spinster homolog 2 (Drosophila)##BC041772|SPNS2|124976|spinster homolog 2 (Drosophila)##AB441165|SPNS2|124976|spinster homolog 2 (Drosophila)##EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a##BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a##AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a##AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a##AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a##AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a	0.0	
chr6	68936474	68936615	reg1022310.p1	6.043	+	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	-337516	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	-2519451	-	AY358133 NM_198283 AK310478	-2646839	-	AL833240 TSC_hg19_v1_chr6_-_69345026	408428	-	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	408857	+	TSC_hg19_v1_chr6_-_70506472 AB074281	1569933	-	AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3##AB074281|LMBRD1|55788|LMBR1 domain containing 1	0.257744	CTCF.p2:26:0.258
chrX	107780402	107780490	reg1019105.p1	6.043	+	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	-97362	+	BT007228 L22763 U04845 NM_001847 BC005305	-97783	-	BC140855 BC144669 BC000874 BC070203 NM_033641 D21337	-98839	-	NM_003604 AF007567	199176	-	NM_001522 L37378	944839	-	AK023289 NM_018698 BC120984 BC120985	998568	+	BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##BC140855|COL4A6|1288|collagen, type IV, alpha 6##BC144669|COL4A6|1288|collagen, type IV, alpha 6##BC000874|COL4A6|1288|collagen, type IV, alpha 6##BC070203|COL4A6|1288|collagen, type IV, alpha 6##NM_033641|COL4A6|1288|collagen, type IV, alpha 6##D21337|COL4A6|1288|collagen, type IV, alpha 6##NM_003604|IRS4|8471|insulin receptor substrate 4##AF007567|IRS4|8471|insulin receptor substrate 4##NM_001522|GUCY2F|2986|guanylate cyclase 2F, retinal##L37378|GUCY2F|2986|guanylate cyclase 2F, retinal##AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2	0.229414	CTCF.p2:7:0.229
chr13	61821789	61821912	reg1017022.p1	6.042	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-850371	+	BX537910 NM_001146071 NM_030794	-851260	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-1083749	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	167403	-	AK289924 NM_022843	167804	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	5982654	-	EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9	0.0	
chr15	30465684	30465794	reg1023676.p2	6.042	+	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-351116	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-351397	-	NM_015307	-602813	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	219973	-	TSC_hg19_v1_chr15_+_30918372 BC071990	452647	+	BC105788 NM_001039841	453139	+	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B	0.998598	CTCF.p2:7:0.999
chr2	101857247	101857390	reg1026681.p1	6.042	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	-89535	-	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	-238596	+	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	-420552	+	TSC_hg19_v1_chr2_+_101869347 NM_017546	12019	+	TSC_hg19_v1_chr2_+_101869378 AF103798 BC064421 BC018664	12074	+	AM392566 AB463234 TSC_hg19_v1_chr2_-_101925153 BC019355 BC032328 AK074985 AK075141 AY450390 BC045743 AK129799 NM_173647	67824	-	AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_017546|C2orf29|55571|chromosome 2 open reading frame 29##AF103798|C2orf29|55571|chromosome 2 open reading frame 29##BC064421|C2orf29|55571|chromosome 2 open reading frame 29##BC018664|C2orf29|55571|chromosome 2 open reading frame 29##AM392566|RNF149|284996|ring finger protein 149##BC019355|RNF149|284996|ring finger protein 149##BC032328|RNF149|284996|ring finger protein 149##AK074985|RNF149|284996|ring finger protein 149##AK075141|RNF149|284996|ring finger protein 149##AY450390|RNF149|284996|ring finger protein 149##BC045743|RNF149|284996|ring finger protein 149##AK129799|RNF149|284996|ring finger protein 149##NM_173647|RNF149|284996|ring finger protein 149	0.342266	CTCF.p2:6:0.342
chr2	174913080	174913190	reg1022521.p1	6.042	+	AY441957 NM_001172712 NM_003111	-82706	-	BC126414 BC143928 AK304199 TSC_hg19_v1_chr2_-_174830067	-83126	-	TSC_hg19_v1_chr2_-_174829232 AJ310752 AJ430844 AY441958 AB528284	-83941	-	BC068447 TSC_hg19_v1_chr2_-_175113235 BC013925 BC091522 DQ250006	200082	-	TSC_hg19_v1_chr2_-_175113245 AK296339 BC029376 AF134478	200110	-	TSC_hg19_v1_chr2_-_175113261 AK225112 AF078868	200135	-	AY441957|SP3|6670|Sp3 transcription factor##NM_001172712|SP3|6670|Sp3 transcription factor##NM_003111|SP3|6670|Sp3 transcription factor##BC126414|SP3|6670|Sp3 transcription factor##BC143928|SP3|6670|Sp3 transcription factor##AK304199|SP3|6670|Sp3 transcription factor##AJ310752|SP3|6670|Sp3 transcription factor##AY441958|SP3|6670|Sp3 transcription factor##BC068447|OLA1|29789|Obg-like ATPase 1##BC013925|OLA1|29789|Obg-like ATPase 1##BC091522|OLA1|29789|Obg-like ATPase 1##DQ250006|OLA1|29789|Obg-like ATPase 1##AK296339|OLA1|29789|Obg-like ATPase 1##BC029376|OLA1|29789|Obg-like ATPase 1##AF134478|OLA1|29789|Obg-like ATPase 1##AK225112|OLA1|29789|Obg-like ATPase 1##AF078868|OLA1|29789|Obg-like ATPase 1	0.894167	CTCF.p2:15:0.894
chr10	12256813	12256943	reg1023008.p1	6.041	+	TSC_hg19_v1_chr10_+_12238212 BC001600 AK289362 CR456966	-18652	+	TSC_hg19_v1_chr10_+_12238194 BC009598	-18679	+	TSC_hg19_v1_chr10_+_12238186 U27112 AK308790	-18696	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	134697	+	TSC_hg19_v1_chr10_+_12391709 BC035745	134839	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	134899	+	BC001600|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289362|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##CR456966|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##BC009598|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##U27112|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK308790|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID	0.7187	CTCF.p2:-20:0.719
chr10	91129225	91129405	reg1005791.p1	6.041	+	BC040833 AK091558 TSC_hg19_v1_chr10_-_91102477	-26860	-	NM_001031683 AK297137 AF026939 BC001383 BC004977	-37032	+	NM_001549 AK290427 AF083470 AK312675 U52513 TSC_hg19_v1_chr10_+_91087771	-41629	+	BX647300 NM_001010987 BC150189 BC137368 BC137369	8512	+	NM_001548 BC007091 AK314588 AK308688 X03557	23048	+	TSC_hg19_v1_chr10_+_91174324 NM_012420 BC025786	45028	+	AK091558|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##NM_001549|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK290427|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AF083470|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK312675|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##U52513|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BX647300|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##NM_001010987|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC150189|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC137368|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC137369|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##NM_001548|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##BC007091|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK314588|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK308688|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##X03557|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##NM_012420|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##BC025786|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	0.0	
chr15	79030611	79030741	reg1020578.p2	6.041	+	TSC_hg19_v1_chr15_-_78933573 U62439 Y08416 BC096080 BC096081 BC096082 BC096083 NM_000750 U48861	-97103	-	TSC_hg19_v1_chr15_-_78913532 BC098443 BC006114 NM_000743 NM_001166694	-117104	-	AF385584 Y08418 BT006646 BT006897 CU674246 CU675253 M86383 M37981 TSC_hg19_v1_chr15_-_78913298 BC000513 BC001642 BC002996 U62432	-117443	-	TSC_hg19_v1_chr15_+_79102818 AK095823	72151	+	AY327122 AF140675 TSC_hg19_v1_chr15_-_79103698 BC061631 NM_014272 AK299844	73074	-	TSC_hg19_v1_chr15_+_79165157 NM_006791 NM_206839	134498	+	U62439|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##Y08416|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096080|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096081|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096082|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096083|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##NM_000750|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##U48861|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC098443|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC006114|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_000743|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_001166694|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AF385584|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##Y08418|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006646|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006897|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##M37981|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC000513|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC001642|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC002996|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##U62432|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AK095823|MORF4L1|10933|mortality factor 4 like 1##AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_006791|MORF4L1|10933|mortality factor 4 like 1##NM_206839|MORF4L1|10933|mortality factor 4 like 1	0.999524	CTCF.p2:-16:1.000
chr19	2227595	2227702	reg1021561.p1	6.041	+	BC021037 TSC_hg19_v1_chr19_+_2222534	-5174	+	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	-63510	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-76095	-	BC032803 TSC_hg19_v1_chr19_+_2232168	4473	+	CR457253 CU679203 TSC_hg19_v1_chr19_-_2236329 AK092742 AX747701 BC003084 BC008966 AK001159 NM_018049	8641	-	TSC_hg19_v1_chr19_-_2236650 AK098725	9007	-	BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##CR457253|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK092742|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC003084|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC008966|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK001159|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##NM_018049|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK098725|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1	0.0	
chr22	28200825	28200921	reg1020235.p1	6.041	+	TSC_hg19_v1_chr22_-_28197481 NM_002430 X82209	-3396	-	TSC_hg19_v1_chr22_+_27068725 AK026502	-1132133	+	TSC_hg19_v1_chr22_+_27053392 AB263414 AB263415 AB263416 AB263417 AK098833	-1147401	+	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	114301	-	TSC_hg19_v1_chr22_-_28315203 BC031427	114334	-	TSC_hg19_v1_chr22_-_28315245 BC018704 D30037 AK313064 CR456541 NM_012399	114391	-	NM_002430|MN1|4330|meningioma (disrupted in balanced translocation) 1##X82209|MN1|4330|meningioma (disrupted in balanced translocation) 1##AK026502|LOC100507637|100507637|uncharacterized LOC100507637##AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta##D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta##CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta	0.147852	
chr2	232110540	232110659	reg1019997.p1	6.041	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-47205	+	AY219922 TSC_hg19_v1_chr2_+_232063378	-47221	+	TSC_hg19_v1_chr2_+_232063340 NM_025139 BX537956 AK309395	-47244	+	TSC_hg19_v1_chr2_+_232120778 AB055779	10179	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	149823	+	AK001314 TSC_hg19_v1_chr2_-_232326464	215830	-	AY929062|ARMC9|80210|armadillo repeat containing 9##AY219922|ARMC9|80210|armadillo repeat containing 9##NM_025139|ARMC9|80210|armadillo repeat containing 9##BX537956|ARMC9|80210|armadillo repeat containing 9##AK309395|ARMC9|80210|armadillo repeat containing 9##AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK001314|NCL|4691|nucleolin	0.282797	CTCF.p2:0:0.283
chr5	81403240	81403351	reg1022729.p1	6.041	+	TSC_hg19_v1_chr5_+_81268100 AL136912	-135197	+	AF318326 TSC_hg19_v1_chr5_+_81267992	-135305	+	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	-135450	+	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	170876	-	TSC_hg19_v1_chr5_-_81574219 NM_001025	170924	-	BC093982 BC112191 NM_001017971	197870	+	AL136912|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AF318326|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##NM_001025|RPS23|6228|ribosomal protein S23##BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like	0.879492	CTCF.p2:4:0.879
chr6_cox_hap2	2395482	2395616	reg1026375.p1	6.041	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.51578	CTCF.p2:-12:0.516
chrX	96281548	96281688	reg1022911.p2	6.041	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	-142648	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	-341664	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	-341867	+	EF676096 NM_001105243 NM_001184880 NM_020766 TSC_hg19_v1_chrX_-_99665272	3383655	-	NM_022144 AF191770 BC034030 AF291656 AF234259 AY358706 AB055421 AB590911 CU689814	3558283	+	BT006977 CR457115 AB527646 DQ890668 DQ893849 TSC_hg19_v1_chrX_-_99891804 AF053453 AK299176 AF133426 AK309581 AY358825 AB097016 AF043906 U84895 BC012389 NM_003270 AK075072 AB209876 AK315773 AK300852	3610150	-	NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##EF676096|PCDH19|57526|protocadherin 19##NM_001105243|PCDH19|57526|protocadherin 19##NM_001184880|PCDH19|57526|protocadherin 19##NM_020766|PCDH19|57526|protocadherin 19##NM_022144|TNMD|64102|tenomodulin##AF191770|TNMD|64102|tenomodulin##BC034030|TNMD|64102|tenomodulin##AF291656|TNMD|64102|tenomodulin##AF234259|TNMD|64102|tenomodulin##AY358706|TNMD|64102|tenomodulin##AB055421|TNMD|64102|tenomodulin##BT006977|TSPAN6|7105|tetraspanin 6##CR457115|TSPAN6|7105|tetraspanin 6##DQ890668|TSPAN6|7105|tetraspanin 6##DQ893849|TSPAN6|7105|tetraspanin 6##AF053453|TSPAN6|7105|tetraspanin 6##AK299176|TSPAN6|7105|tetraspanin 6##AF133426|TSPAN6|7105|tetraspanin 6##AK309581|TSPAN6|7105|tetraspanin 6##AY358825|TSPAN6|7105|tetraspanin 6##AB097016|TSPAN6|7105|tetraspanin 6##AF043906|TSPAN6|7105|tetraspanin 6##U84895|TSPAN6|7105|tetraspanin 6##BC012389|TSPAN6|7105|tetraspanin 6##NM_003270|TSPAN6|7105|tetraspanin 6##AK075072|TSPAN6|7105|tetraspanin 6##AB209876|TSPAN6|7105|tetraspanin 6##AK315773|TSPAN6|7105|tetraspanin 6##AK300852|TSPAN6|7105|tetraspanin 6	0.072963	
chr16	81865412	81865589	reg1022480.p1	6.040	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-52570	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-52598	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	-52603	+	BC019670 AK315652 AK026740 NM_145168	179568	-	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	203361	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	203432	+	BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.040871	
chr5	39570658	39570775	reg1024189.p2	6.040	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-145399	-	TSC_hg19_v1_chr5_-_39425082 AK314381	-145652	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	-145765	-	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	1109311	+	TSC_hg19_v1_chr5_+_40680042 L25124	1109328	+	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	1185324	-	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33	0.191808	
chr5	43387154	43387254	reg1022912.p1	6.040	+	TSC_hg19_v1_chr5_-_43313581 NM_001098272 NM_002130	-73608	-	BC000297 BC082234 M15802 X66435 TSC_hg19_v1_chr5_-_43313515 AK095492 AK315593	-73673	-	BC036422 NM_153361	-194878	+	TSC_hg19_v1_chr5_-_43397231 AK307307	10022	-	AB590493 AF220210 CU686894 HM067700 BC062668 BC069532 AF266504 AF110384 AK312120 NM_148672	25248	-	BC013351 BC063832 AK094078 TSC_hg19_v1_chr5_-_43483947 AK025310 AK225220 NM_022483 AK315466	96760	-	NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##M15802|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##BC036422|NIM1|167359|serine/threonine-protein kinase NIM1##NM_153361|NIM1|167359|serine/threonine-protein kinase NIM1##AK307307|CCL28|56477|chemokine (C-C motif) ligand 28##AF220210|CCL28|56477|chemokine (C-C motif) ligand 28##HM067700|CCL28|56477|chemokine (C-C motif) ligand 28##BC062668|CCL28|56477|chemokine (C-C motif) ligand 28##BC069532|CCL28|56477|chemokine (C-C motif) ligand 28##AF266504|CCL28|56477|chemokine (C-C motif) ligand 28##AF110384|CCL28|56477|chemokine (C-C motif) ligand 28##AK312120|CCL28|56477|chemokine (C-C motif) ligand 28##NM_148672|CCL28|56477|chemokine (C-C motif) ligand 28##BC013351|C5orf28|64417|chromosome 5 open reading frame 28##BC063832|C5orf28|64417|chromosome 5 open reading frame 28##AK025310|C5orf28|64417|chromosome 5 open reading frame 28##AK225220|C5orf28|64417|chromosome 5 open reading frame 28##NM_022483|C5orf28|64417|chromosome 5 open reading frame 28##AK315466|C5orf28|64417|chromosome 5 open reading frame 28	0.0	
chr9	133745513	133745605	reg1020410.p1	6.040	+	TSC_hg19_v1_chr9_+_133710748 M14754 NM_005157	-34771	+	TSC_hg19_v1_chr9_+_133710665 M30833 X16416	-34892	+	NM_007313 AB209642 M14753	-156240	+	AB109625 BC101127 BC101128 EU832764 GQ129307 NM_198180	23665	-	BC112892 AY358311 AK292489 TSC_hg19_v1_chr9_-_133814106	68492	-	BC032953 NM_032843 TSC_hg19_v1_chr9_-_133814253	68685	-	M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##NM_007313|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AB209642|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M14753|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AB109625|QRFP|347148|pyroglutamylated RFamide peptide##BC101127|QRFP|347148|pyroglutamylated RFamide peptide##BC101128|QRFP|347148|pyroglutamylated RFamide peptide##EU832764|QRFP|347148|pyroglutamylated RFamide peptide##GQ129307|QRFP|347148|pyroglutamylated RFamide peptide##NM_198180|QRFP|347148|pyroglutamylated RFamide peptide##BC112892|FIBCD1|84929|fibrinogen C domain containing 1##AY358311|FIBCD1|84929|fibrinogen C domain containing 1##AK292489|FIBCD1|84929|fibrinogen C domain containing 1##BC032953|FIBCD1|84929|fibrinogen C domain containing 1##NM_032843|FIBCD1|84929|fibrinogen C domain containing 1	0.828943	CTCF.p2:-8:0.829
chr11	110045020	110045114	reg1020302.p2	6.039	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	-80937	+	AK095101 TSC_hg19_v1_chr11_+_109963524	-81539	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-752168	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	122246	-	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	255649	+	AY496266 TSC_hg19_v1_chr11_-_110582834	537736	-	NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20	0.755581	CTCF.p2:-21:0.756
chr21	44689486	44689587	reg1026291.p2	6.039	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-100362	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-161852	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-161911	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	156453	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	157459	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	389826	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	1.216508	CTCF.p2:4:0.997
chr3	68942906	68943057	reg1024477.p2	6.039	+	NM_213609 AK289668 AK290446 BC025746	-889576	+	AY325114 NM_001252216	-902248	+	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	-1237831	+	BC031566 TSC_hg19_v1_chr3_-_68981699 AY325117 NM_001005527 NM_182522	38736	-	TSC_hg19_v1_chr3_-_69037499 AK123213	94525	-	TSC_hg19_v1_chr3_-_69062806 BC060887 NM_173654 AK304102 BX648818	119820	-	NM_213609|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AK289668|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AK290446|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##BC025746|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AY325114|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##NM_001252216|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##BC031566|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##AY325117|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##NM_001005527|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##NM_182522|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##AK123213|C3orf64|285203|chromosome 3 open reading frame 64##BC060887|C3orf64|285203|chromosome 3 open reading frame 64##NM_173654|C3orf64|285203|chromosome 3 open reading frame 64##AK304102|C3orf64|285203|chromosome 3 open reading frame 64##BX648818|C3orf64|285203|chromosome 3 open reading frame 64	0.980392	CTCF.p2:5:0.980
chr17	55532674	55532855	reg1016069.p2	6.038	+	AK093888 AX748353 NM_170721	-198391	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-198791	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-369621	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	394640	-	AK000746 NM_017949	447985	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	499912	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.0	
chr10	121028631	121028811	reg1022399.p2	6.037	+	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-61460	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-90374	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-90418	-	NM_002925	267323	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	273469	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	327387	-	BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.013906	
chr11	115401630	115401716	reg1020902.p2	6.037	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-26493	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-313025	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-852425	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	1242025	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	1257042	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	1257065	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.0	
chr19	55159700	55159816	reg1024170.p1	6.037	+	NM_001081638 NM_001081639 TSC_hg19_v1_chr19_+_55141934 AK223310 AF283984 AF004230 NM_001081637 AF283985	-17791	+	AK311555 BC015731 NM_006669 AK292028	-31121	+	BC047007 AK290919 AK311226 AF025530 NM_006863 BC032238 BC063009 AF025529	-54673	+	NM_001081438 NM_006847	14365	+	TSC_hg19_v1_chr19_+_55174417 AK292082 AK309227 AK314783	14655	+	TSC_hg19_v1_chr19_+_55174436 AF283988 EU915607 BC026309 AF025532 DQ892089 DQ895282 CU693206 CR542048 U82979	14697	+	NM_001081638|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081639|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AK223310|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AF283984|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081637|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AF283985|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##BC015731|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_006669|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AK292028|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##BC047007|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AK290919|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AK311226|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AF025530|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##NM_006863|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##BC032238|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##BC063009|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AF025529|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##NM_001081438|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##NM_006847|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK292082|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK309227|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK314783|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AF283988|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##EU915607|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##BC026309|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AF025532|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##DQ892089|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##DQ895282|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##CR542048|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##U82979|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4	0.247747	CTCF.p2:15:0.248
chr4	131729790	131729925	reg1025045.p1	6.037	+	NM_001099783	-1712576	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-1714990	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-1715267	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	2340599	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	2343426	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	3393061	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.984494	CTCF.p2:-1:0.984
chr6	147106268	147106412	reg1022331.p2	6.037	+	AK097570 NM_024694 AL832192	-186203	+	TSC_hg19_v1_chr6_+_146864968 AK312202 U71127 AB529170 CU677203 DQ892882 DQ896131 AF498958 BT020016 U59878	-241332	+	BC015061 NM_006834 TSC_hg19_v1_chr6_+_146864864	-241471	+	TSC_hg19_v1_chr6_+_147524880 BC043645	418534	+	NM_001127715 NM_139244 AL834152 BC107737 BC113382 BC113408	419216	+	TSC_hg19_v1_chr6_+_147527118 AK128121	420770	+	AK097570|C6orf103|79747|chromosome 6 open reading frame 103##NM_024694|C6orf103|79747|chromosome 6 open reading frame 103##AL832192|C6orf103|79747|chromosome 6 open reading frame 103##AK312202|RAB32|10981|RAB32, member RAS oncogene family##U71127|RAB32|10981|RAB32, member RAS oncogene family##DQ892882|RAB32|10981|RAB32, member RAS oncogene family##DQ896131|RAB32|10981|RAB32, member RAS oncogene family##AF498958|RAB32|10981|RAB32, member RAS oncogene family##BT020016|RAB32|10981|RAB32, member RAS oncogene family##U59878|RAB32|10981|RAB32, member RAS oncogene family##BC015061|RAB32|10981|RAB32, member RAS oncogene family##NM_006834|RAB32|10981|RAB32, member RAS oncogene family##BC043645|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001127715|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_139244|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AL834152|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC107737|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113382|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113408|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AK128121|STXBP5|134957|syntaxin binding protein 5 (tomosyn)	0.996125	CTCF.p2:-16:0.996
chr15	100045038	100045218	reg1025824.p2	6.035	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-253486	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-253712	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-255422	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	61025	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	61066	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	61107	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.109121	
chr21	25418169	25418263	reg1024804.p2	6.035	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-3047443	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-3047526	+	TSC_hg19_v1_chr21_+_22370656 BC052946 NM_004540	-3047574	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	382852	+	TSC_hg19_v1_chr21_+_26934442 AF402776	1516256	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	1561599	-	BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##BC052946|NCAM2|4685|neural cell adhesion molecule 2##NM_004540|NCAM2|4685|neural cell adhesion molecule 2##AK124194|FLJ42200|400860|FLJ42200 protein##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39	0.616831	CTCF.p2:-43:0.617
chr2	79226682	79226816	reg1024250.p1	6.035	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	-1477331	-	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-3288698	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-3289030	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	26089	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	88384	-	AK307292 NM_002909 TSC_hg19_v1_chr2_+_79347583	120787	+	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta##AK307292|REG1A|5967|regenerating islet-derived 1 alpha##NM_002909|REG1A|5967|regenerating islet-derived 1 alpha	0.820979	CTCF.p2:-4:0.821
chr4	10166596	10166702	reg1022488.p1	6.035	+	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-48113	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-48171	-	AK222764 AK225276 TSC_hg19_v1_chr4_-_10118453	-48199	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	292361	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	519752	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	1263883	-	NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##AK222764|WDR1|9948|WD repeat domain 1##AK225276|WDR1|9948|WD repeat domain 1##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1	0.76722	CTCF.p2:-3:0.767
chr4	185204397	185204551	reg1019466.p1	6.035	+	BC035035 AY358676 AK057370 NM_153343	-65409	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-376563	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-376654	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	191207	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	366127	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	366359	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.198354	
chr5	146958115	146958215	reg1024165.p2	6.035	+	BC077077 NM_001197294 TSC_hg19_v1_chr5_-_146889632	-68539	-	EU007906 CU687310 EU832163 EU832257 TSC_hg19_v1_chr5_-_146889506	-68699	-	CU691634 AB384367 EU832180 EU832273 TSC_hg19_v1_chr5_-_146833229 BC039006 D78014 AK297223 NM_001387 Y07818	-124900	-	BC003189 AB011127 TSC_hg19_v1_chr5_-_147162128 AK291280	203929	-	BC017354 TSC_hg19_v1_chr5_-_147162218	204038	-	AF273057 NM_014790 TSC_hg19_v1_chr5_-_147162254	204089	-	BC077077|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3##EU007906|DPYSL3|1809|dihydropyrimidinase-like 3##EU832163|DPYSL3|1809|dihydropyrimidinase-like 3##EU832257|DPYSL3|1809|dihydropyrimidinase-like 3##EU832180|DPYSL3|1809|dihydropyrimidinase-like 3##EU832273|DPYSL3|1809|dihydropyrimidinase-like 3##BC039006|DPYSL3|1809|dihydropyrimidinase-like 3##D78014|DPYSL3|1809|dihydropyrimidinase-like 3##AK297223|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3##Y07818|DPYSL3|1809|dihydropyrimidinase-like 3##BC003189|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AB011127|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AK291280|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##BC017354|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##AF273057|JAKMIP2|9832|janus kinase and microtubule interacting protein 2##NM_014790|JAKMIP2|9832|janus kinase and microtubule interacting protein 2	0.808601	CTCF.p2:11:0.809
chr9	38727526	38727641	reg1022441.p1	6.035	+	TSC_hg19_v1_chr9_-_38620602 BC056266	-106960	-	AB385522 AB095935 BC152434 NM_147195	-107262	-	TSC_hg19_v1_chr9_-_38424452 AB463783 NM_001007563	-303118	-	AB385498 AK294281 AB051501 BC132737 BC144130 AK056833 NM_033655	560597	-	AK302569 NM_001040065 NM_001085452 BC146855	628102	+	AK302569 NM_001040065 NM_001085452 BC146855	1157378	+	BC056266|ANKRD18A|253650|ankyrin repeat domain 18A##AB095935|ANKRD18A|253650|ankyrin repeat domain 18A##BC152434|ANKRD18A|253650|ankyrin repeat domain 18A##NM_147195|ANKRD18A|253650|ankyrin repeat domain 18A##NM_001007563|IGFBPL1|347252|insulin-like growth factor binding protein-like 1##AK294281|CNTNAP3|79937|contactin associated protein-like 3##AB051501|CNTNAP3|79937|contactin associated protein-like 3##BC132737|CNTNAP3|79937|contactin associated protein-like 3##BC144130|CNTNAP3|79937|contactin associated protein-like 3##AK056833|CNTNAP3|79937|contactin associated protein-like 3##NM_033655|CNTNAP3|79937|contactin associated protein-like 3##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2	0.853676	CTCF.p2:-6:0.854
chrX	64114711	64114820	reg1019487.p2	6.035	+	AK298847 NM_017677 TSC_hg19_v1_chrX_-_63615334	-499422	-	CU680314 TSC_hg19_v1_chrX_-_63615324 BC012399	-499481	-	AK096896 AK300684 NM_130388	-664267	-	TSC_hg19_v1_chrX_-_64139018 AK001547	24276	-	TSC_hg19_v1_chrX_-_64196331 AK022918 AK123763 AK315485 AK222708 AK293570 AF270491 BC004411 AB032992 NM_001178033 NM_018684	81584	-	AK022807 TSC_hg19_v1_chrX_-_64254616 NM_001178032 NM_001243804	139872	-	NM_017677|MTMR8|55613|myotubularin related protein 8##BC012399|MTMR8|55613|myotubularin related protein 8##AK096896|ASB12|142689|ankyrin repeat and SOCS box containing 12##AK300684|ASB12|142689|ankyrin repeat and SOCS box containing 12##NM_130388|ASB12|142689|ankyrin repeat and SOCS box containing 12##AK001547|ZC4H2|55906|zinc finger, C4H2 domain containing##AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing##AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing##AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing##AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing##AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing##AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing##BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing##AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing##AK022807|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001178032|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001243804|ZC4H2|55906|zinc finger, C4H2 domain containing	0.982918	CTCF.p2:-2:0.983
chr10	11752890	11753070	reg1018618.p2	6.034	+	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	-99344	-	NM_001080491	-178707	-	TSC_hg19_v1_chr10_+_11207490 AK295511	-545488	+	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	31418	+	TSC_hg19_v1_chr10_+_11865354 BC017269 BC048800 NM_153256	112378	+	AK056703 TSC_hg19_v1_chr10_-_11936707	183722	-	AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK295511|CELF2|10659|CUGBP, Elav-like family member 2##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC017269|C10orf47|254427|chromosome 10 open reading frame 47##BC048800|C10orf47|254427|chromosome 10 open reading frame 47##NM_153256|C10orf47|254427|chromosome 10 open reading frame 47##AK056703|LOC219731|219731|uncharacterized LOC219731	0.0	
chr1	220259627	220259753	reg1023709.p2	6.034	+	TSC_hg19_v1_chr1_-_220219923 BC046156 NM_004446	-39754	-	TSC_hg19_v1_chr1_-_220219873 AK296755 BC067841	-39827	-	TSC_hg19_v1_chr1_-_220219848 BC058921 CR933648	-39848	-	TSC_hg19_v1_chr1_-_220263112 AF125042 AK291943 BC017801 AK298476 AK300777	3431	-	AJ249339 TSC_hg19_v1_chr1_-_220263167 AK315962 NM_006085	3484	-	TSC_hg19_v1_chr1_+_220267461 AY267462 NM_018060 BC137438	7762	+	BC046156|EPRS|2058|glutamyl-prolyl-tRNA synthetase##NM_004446|EPRS|2058|glutamyl-prolyl-tRNA synthetase##AK296755|EPRS|2058|glutamyl-prolyl-tRNA synthetase##BC067841|EPRS|2058|glutamyl-prolyl-tRNA synthetase##BC058921|EPRS|2058|glutamyl-prolyl-tRNA synthetase##CR933648|EPRS|2058|glutamyl-prolyl-tRNA synthetase##AF125042|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AK291943|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##BC017801|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AK298476|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AK300777|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AJ249339|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AK315962|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##NM_006085|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	0.90303	CTCF.p2:14:0.903
chr13	22487240	22487339	reg1023043.p1	6.033	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-242141	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-308929	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-308980	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	1267826	+	TSC_hg19_v1_chr13_-_23949652 AK125458	1462361	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	1520551	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.016882	
chr13	43072785	43072906	reg1025516.p1	6.033	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	-226560	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	-360635	+	NM_152910 NM_178009 AB078967 AB078968	-449980	+	BC040889 NM_033012	64026	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	75489	+	NM_182508 AK310859 AK098238 BC093659 BC112237	282879	+	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30	0.0	
chr4	163566668	163566787	reg1022140.p2	6.033	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	-481576	-	AK294459 NM_014247	-3377730	+	AK058100 NM_152543	-3610395	-	TSC_hg19_v1_chr4_-_164088002 AK097352	521265	-	TSC_hg19_v1_chr4_-_164088043 AK308601	521310	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	521351	-	AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.029091	
chr4	78394822	78394927	reg1020575.p1	6.033	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-315381	+	TSC_hg19_v1_chr4_+_78078398 U47414	-316414	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	-316513	+	AF044197 NM_006419	38031	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	345670	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	389040	+	L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1	0.968248	CTCF.p2:0:0.968
chr9	139870165	139870299	reg1023514.p1	6.033	+	BC041168 NM_178536 AY301272	-23459	+	NM_000606 M17999 X06465 BC113624 BC113626 M17263 HQ258743 AB590759	-30499	+	BC014130 TSC_hg19_v1_chr9_-_139839140 BC035355 BC031100 NM_018998	-31096	-	TSC_hg19_v1_chr9_+_139871955 NM_000954 AK075333 M61900 AK312817	1729	+	TSC_hg19_v1_chr9_+_139872014 BC005939 AB464076 AY026356 BT019921 BT019922	1790	+	AK127160 NM_207510	7212	+	BC041168|LCN12|286256|lipocalin 12##NM_178536|LCN12|286256|lipocalin 12##AY301272|LCN12|286256|lipocalin 12##NM_000606|C8G|733|complement component 8, gamma polypeptide##M17999|C8G|733|complement component 8, gamma polypeptide##X06465|C8G|733|complement component 8, gamma polypeptide##BC113624|C8G|733|complement component 8, gamma polypeptide##BC113626|C8G|733|complement component 8, gamma polypeptide##M17263|C8G|733|complement component 8, gamma polypeptide##HQ258743|C8G|733|complement component 8, gamma polypeptide##BC014130|FBXW5|54461|F-box and WD repeat domain containing 5##BC035355|FBXW5|54461|F-box and WD repeat domain containing 5##BC031100|FBXW5|54461|F-box and WD repeat domain containing 5##NM_018998|FBXW5|54461|F-box and WD repeat domain containing 5##NM_000954|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##AK075333|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##M61900|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##AK312817|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##BC005939|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##AY026356|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##BT019921|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##BT019922|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##AK127160|LCNL1|401562|lipocalin-like 1##NM_207510|LCNL1|401562|lipocalin-like 1	0.352033	CTCF.p2:1:0.352
chr9	80071885	80072016	reg1022883.p2	6.033	+	AK027023 TSC_hg19_v1_chr9_+_79968352	-103602	+	TSC_hg19_v1_chr9_+_79792474 AB054005	-279442	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	-279611	+	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	191281	-	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	574234	-	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	779080	+	AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa	0.086803	
chr4	107187469	107187596	reg1023902.p1	6.031	+	TSC_hg19_v1_chr4_+_106816634 AK290029 AK304721 AL832465 BC131587	-370842	+	TSC_hg19_v1_chr4_+_106816593 AK295772 NM_001033047 NM_001184690 NM_001184691 NM_001184692 NM_001184693 AK302477 AK304279 AY358336	-370931	+	AK292355 BC032942 NM_001031720	-555565	+	NM_001142415 AK297950 AK095951 NM_004757	49277	+	TSC_hg19_v1_chr4_-_107237383 BC068496 AK315571 BX647851 BC009208 NM_001163435 NM_001163437 NM_033115	49853	-	AK303965 NM_001142416 TSC_hg19_v1_chr4_+_107237695	50147	+	AK290029|NPNT|255743|nephronectin##AK304721|NPNT|255743|nephronectin##AL832465|NPNT|255743|nephronectin##BC131587|NPNT|255743|nephronectin##AK295772|NPNT|255743|nephronectin##NM_001033047|NPNT|255743|nephronectin##NM_001184690|NPNT|255743|nephronectin##NM_001184691|NPNT|255743|nephronectin##NM_001184692|NPNT|255743|nephronectin##NM_001184693|NPNT|255743|nephronectin##AK302477|NPNT|255743|nephronectin##AK304279|NPNT|255743|nephronectin##AY358336|NPNT|255743|nephronectin##AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001142415|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##AK297950|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##AK095951|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_004757|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##BC068496|TBCK|93627|TBC1 domain containing kinase##AK315571|TBCK|93627|TBC1 domain containing kinase##BX647851|TBCK|93627|TBC1 domain containing kinase##BC009208|TBCK|93627|TBC1 domain containing kinase##NM_001163435|TBCK|93627|TBC1 domain containing kinase##NM_001163437|TBCK|93627|TBC1 domain containing kinase##NM_033115|TBCK|93627|TBC1 domain containing kinase##AK303965|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_001142416|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	0.0	
chr6	29705964	29706066	reg1024071.p1	6.031	+	TSC_hg19_v1_chr6_+_29691210 AK096962 AK125274 AK298704 AK303670 AK309156 AK225185 AK301488 BC062991 CU687616 AB590981 AY253269 AY253270 AY253271 DQ367723 GQ891552 AY216682 AY221102	-14788	+	NM_001098478 NM_001098479 NM_018950 TSC_hg19_v1_chr6_+_29691177 AK300090 AK302420 BC009260	-14860	+	BC157878 BC171888 NM_001109809	-61085	-	AL832418 TSC_hg19_v1_chr6_-_29716816 AK092748 AX747705	10797	-	BC051362 NM_001207043	53667	+	BC021708 AK302054 NM_002127 AK093478 AX748153	88738	+	AK096962|HLA-F|3134|major histocompatibility complex, class I, F##AK125274|HLA-F|3134|major histocompatibility complex, class I, F##AK298704|HLA-F|3134|major histocompatibility complex, class I, F##AK303670|HLA-F|3134|major histocompatibility complex, class I, F##AK309156|HLA-F|3134|major histocompatibility complex, class I, F##AK225185|HLA-F|3134|major histocompatibility complex, class I, F##AK301488|HLA-F|3134|major histocompatibility complex, class I, F##BC062991|HLA-F|3134|major histocompatibility complex, class I, F##AY253269|HLA-F|3134|major histocompatibility complex, class I, F##AY253270|HLA-F|3134|major histocompatibility complex, class I, F##AY253271|HLA-F|3134|major histocompatibility complex, class I, F##DQ367723|HLA-F|3134|major histocompatibility complex, class I, F##GQ891552|HLA-F|3134|major histocompatibility complex, class I, F##AY216682|HLA-F|3134|major histocompatibility complex, class I, F##AY221102|HLA-F|3134|major histocompatibility complex, class I, F##NM_001098478|HLA-F|3134|major histocompatibility complex, class I, F##NM_001098479|HLA-F|3134|major histocompatibility complex, class I, F##NM_018950|HLA-F|3134|major histocompatibility complex, class I, F##AK300090|HLA-F|3134|major histocompatibility complex, class I, F##AK302420|HLA-F|3134|major histocompatibility complex, class I, F##BC009260|HLA-F|3134|major histocompatibility complex, class I, F##BC157878|ZFP57|346171|zinc finger protein 57 homolog (mouse)##BC171888|ZFP57|346171|zinc finger protein 57 homolog (mouse)##NM_001109809|ZFP57|346171|zinc finger protein 57 homolog (mouse)##AL832418|HLA-F-AS1|285830|HLA-F antisense RNA 1 (non-protein coding)##AK092748|HLA-F-AS1|285830|HLA-F antisense RNA 1 (non-protein coding)##BC051362|LOC554223|554223|histocompatibility antigen-related##NM_001207043|LOC554223|554223|histocompatibility antigen-related##BC021708|HLA-G|3135|major histocompatibility complex, class I, G##AK302054|HLA-G|3135|major histocompatibility complex, class I, G##NM_002127|HLA-G|3135|major histocompatibility complex, class I, G##AK093478|HLA-G|3135|major histocompatibility complex, class I, G	0.95313	CTCF.p2:-8:0.953
chr10	135422467	135422572	reg1024267.p1	6.030	+	AY027807 NM_130784	-39644	-	AK309935 AK314978 BC034821 NM_001143763 NM_001143764	-43410	-	TSC_hg19_v1_chr10_+_135340866 AK290822 NM_000773 J02625 AF182276 DQ149222 BC067435 BC067433 CU688292 AF084225 AJ853939 AJ853940 AJ877238	-81587	+	AY744466 NM_001080998	17779	-	NM_001127386 NM_033178 NM_001127387 NM_001127388 NM_001127389 NM_001164467 NM_012147	57880	+	NM_001127386 NM_033178 NM_001127387 NM_001127388 NM_001127389 NM_001164467 NM_012147	61190	+	AY027807|SYCE1|93426|synaptonemal complex central element protein 1##NM_130784|SYCE1|93426|synaptonemal complex central element protein 1##AK309935|SYCE1|93426|synaptonemal complex central element protein 1##AK314978|SYCE1|93426|synaptonemal complex central element protein 1##BC034821|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143763|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143764|SYCE1|93426|synaptonemal complex central element protein 1##AK290822|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##NM_000773|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##J02625|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF182276|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##DQ149222|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067435|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067433|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF084225|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853939|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853940|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ877238|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AY744466|FRG2B|441581|FSHD region gene 2 family, member B##NM_001080998|FRG2B|441581|FSHD region gene 2 family, member B##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_033178|DUX4|22947|double homeobox 4##NM_001127387|DUX4L7|653543|double homeobox 4 like 7##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_012147|DUX2|26583|double homeobox 2##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_033178|DUX4|22947|double homeobox 4##NM_001127387|DUX4L7|653543|double homeobox 4 like 7##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_012147|DUX2|26583|double homeobox 2	0.203913	
chr19	48894840	48894976	reg1023983.p2	6.030	+	X55885 TSC_hg19_v1_chr19_-_48894809 BC008958 AB097047 BC018778 NM_006801 AK312647	-110	-	CU676330 DQ891992 DQ895182 TSC_hg19_v1_chr19_-_48894672	-264	-	NM_012451 BC106891	-27199	+	NM_000836 U77783	3223	+	NM_031485 TSC_hg19_v1_chr19_+_48949078 AK074676 AK300225	54159	+	TSC_hg19_v1_chr19_+_48949239 AK131055 AK315625	54320	+	X55885|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##BC008958|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##AB097047|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##BC018778|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##NM_006801|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##AK312647|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##DQ891992|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##DQ895182|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##NM_012451|SYNGR4|23546|synaptogyrin 4##BC106891|SYNGR4|23546|synaptogyrin 4##NM_000836|GRIN2D|2906|glutamate receptor, ionotropic, N-methyl D-aspartate 2D##U77783|GRIN2D|2906|glutamate receptor, ionotropic, N-methyl D-aspartate 2D##NM_031485|GRWD1|83743|glutamate-rich WD repeat containing 1##AK074676|GRWD1|83743|glutamate-rich WD repeat containing 1##AK300225|GRWD1|83743|glutamate-rich WD repeat containing 1##AK131055|GRWD1|83743|glutamate-rich WD repeat containing 1##AK315625|GRWD1|83743|glutamate-rich WD repeat containing 1	0.025143	
chr6_mcf_hap5	1021524	1021591	reg1023419.p1	6.030	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr9_gl000200_random	48334	48450	reg1026902.p1	6.030	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.415484	CTCF.p2:12:0.415
chr10	48751910	48752009	reg1022122.p1	6.029	+	D49492 AK315322 AK310360 BC028237 NM_004962 TSC_hg19_v1_chr10_-_48439183	-312880	-	EU446620 EU446952 BC074921 BC069643 TSC_hg19_v1_chr10_-_48416877 AF188285 NM_016204 AK314956	-335173	-	J03912 CU691778 BC039844 AB593121 M22453 NM_002900 DQ426897	-361024	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	54964	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	75650	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	75983	-	D49492|GDF10|2662|growth differentiation factor 10##AK315322|GDF10|2662|growth differentiation factor 10##AK310360|GDF10|2662|growth differentiation factor 10##BC028237|GDF10|2662|growth differentiation factor 10##NM_004962|GDF10|2662|growth differentiation factor 10##EU446620|GDF2|2658|growth differentiation factor 2##EU446952|GDF2|2658|growth differentiation factor 2##BC074921|GDF2|2658|growth differentiation factor 2##BC069643|GDF2|2658|growth differentiation factor 2##AF188285|GDF2|2658|growth differentiation factor 2##NM_016204|GDF2|2658|growth differentiation factor 2##AK314956|GDF2|2658|growth differentiation factor 2##J03912|RBP3|5949|retinol binding protein 3, interstitial##BC039844|RBP3|5949|retinol binding protein 3, interstitial##AB593121|RBP3|5949|retinol binding protein 3, interstitial##M22453|RBP3|5949|retinol binding protein 3, interstitial##NM_002900|RBP3|5949|retinol binding protein 3, interstitial##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	0.0	
chr10	69842678	69842806	reg1023026.p1	6.029	+	TSC_hg19_v1_chr10_-_69835055 NM_015601 NM_022079	-7635	-	BC039600 TSC_hg19_v1_chr10_-_69835041 AK026808 AY221963 AY650032 AY650033 AY650034	-7716	-	TSC_hg19_v1_chr10_-_69834956 AK292809 BC015043	-7762	-	NM_032578 TSC_hg19_v1_chr10_+_69869249 AK027343 BX647637 AL832002 AL834247 BC142609 BC144333 BC144334	26596	+	BC032621 NM_145178 AB593108 AB593109	149119	-	AK312275 AB528615 TSC_hg19_v1_chr10_-_70066624 AK092826 AX747753	223872	-	NM_015601|HERC4|26091|hect domain and RLD 4##NM_022079|HERC4|26091|hect domain and RLD 4##BC039600|HERC4|26091|hect domain and RLD 4##AK026808|HERC4|26091|hect domain and RLD 4##AY221963|HERC4|26091|hect domain and RLD 4##AY650032|HERC4|26091|hect domain and RLD 4##AY650033|HERC4|26091|hect domain and RLD 4##AY650034|HERC4|26091|hect domain and RLD 4##AK292809|HERC4|26091|hect domain and RLD 4##BC015043|HERC4|26091|hect domain and RLD 4##NM_032578|MYPN|84665|myopalladin##AK027343|MYPN|84665|myopalladin##BX647637|MYPN|84665|myopalladin##AL832002|MYPN|84665|myopalladin##AL834247|MYPN|84665|myopalladin##BC142609|MYPN|84665|myopalladin##BC144333|MYPN|84665|myopalladin##BC144334|MYPN|84665|myopalladin##BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)##NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)##AB593108|ATOH7|220202|atonal homolog 7 (Drosophila)##AB593109|ATOH7|220202|atonal homolog 7 (Drosophila)##AK312275|PBLD|64081|phenazine biosynthesis-like protein domain containing##AK092826|PBLD|64081|phenazine biosynthesis-like protein domain containing	0.0	
chr12	75082980	75083097	reg1024028.p1	6.029	+	AK054742 TSC_hg19_v1_chr12_+_74933681	-149418	+	TSC_hg19_v1_chr12_+_74931622 BC009111 AL713650	-151399	+	NM_001136262 TSC_hg19_v1_chr12_+_74931614 AK056642	-151453	+	AK309245 AB209994 AK294269 TSC_hg19_v1_chr12_-_75603243	520190	-	AK094720 NM_139136 NM_139137 NM_153748	520472	-	BC033860 AK091839 AX747212 NM_032606	640781	-	BC009111|ATXN7L3B|552889|ataxin 7-like 3B##AL713650|ATXN7L3B|552889|ataxin 7-like 3B##NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B##AK056642|ATXN7L3B|552889|ataxin 7-like 3B##AK309245|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AB209994|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AK294269|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AK094720|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##NM_139136|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##NM_139137|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##NM_153748|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##BC033860|CAPS2|84698|calcyphosine 2##AK091839|CAPS2|84698|calcyphosine 2##NM_032606|CAPS2|84698|calcyphosine 2	0.98884	CTCF.p2:-2:0.989
chr14	54396731	54396873	reg1024082.p1	6.029	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-776752	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-776834	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-776929	-	NM_130851	24467	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	26731	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	466919	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	1.218489	CTCF.p2:0:0.920	CTCF.p2:-39:0.299
chr15	69328133	69328271	reg1027727.p1	6.029	+	NM_001184779 NM_024505 AF353088 AF353089 AK314689 AK074071	-21151	+	NM_001184780 NM_145658 AY358983 AF325189 AF325190 BC017998 AF275321 BC125097 BC125098 CU676134	-105287	+	TSC_hg19_v1_chr15_-_69113264 NM_006305	-214942	-	TSC_hg19_v1_chr15_+_69452935 BC142975 AY635582 NM_015554 AK098595 BC033828 BC019011	124696	+	TSC_hg19_v1_chr15_+_69591278 BC039234 NM_017705	263086	+	AK000197 AY424283 NM_001104554	278539	+	NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_001184780|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_145658|SPESP1|246777|sperm equatorial segment protein 1##AY358983|SPESP1|246777|sperm equatorial segment protein 1##AF325189|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF325190|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC017998|SPESP1|246777|sperm equatorial segment protein 1##AF275321|SPESP1|246777|sperm equatorial segment protein 1##BC125097|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC125098|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_006305|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AY635582|GLCE|26035|glucuronic acid epimerase##NM_015554|GLCE|26035|glucuronic acid epimerase##BC039234|PAQR5|54852|progestin and adipoQ receptor family member V##NM_017705|PAQR5|54852|progestin and adipoQ receptor family member V##AK000197|PAQR5|54852|progestin and adipoQ receptor family member V##AY424283|PAQR5|54852|progestin and adipoQ receptor family member V##NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V	0.0	
chr2	142923411	142923536	reg1023077.p1	6.029	+	AF176832 NM_018557	-34204	-	TSC_hg19_v1_chr2_-_142888540 AK054663	-34917	-	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-3385667	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	711733	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	711767	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	963457	+	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15	0.365467	CTCF.p2:-11:0.365
chr22	41465063	41465234	reg1019787.p1	6.029	+	TSC_hg19_v1_chr22_+_41347389 BC017370 CR456560 AK315722 AF140598 BC001466 AB590096 AF142059 CU013160 CU013448 CU674722 AF085906 AY099360	-117742	+	TSC_hg19_v1_chr22_+_41347364 NM_014248	-117800	+	AB528124 CU013018 CU013306 CR456468 BC112135 AF085232 NM_145174	-207085	-	TSC_hg19_v1_chr22_+_41487787 U01877	22642	+	TSC_hg19_v1_chr22_+_41488610 NM_001429 BC053889	23478	+	TSC_hg19_v1_chr22_-_41593483 BC040700	128341	-	BC017370|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CR456560|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AK315722|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF140598|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##BC001466|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF142059|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CU013160|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CU013448|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF085906|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AY099360|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##NM_014248|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CU013018|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##CU013306|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##CR456468|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##BC112135|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##AF085232|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##NM_145174|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##U01877|EP300|2033|E1A binding protein p300##NM_001429|EP300|2033|E1A binding protein p300##BC053889|EP300|2033|E1A binding protein p300	0.0	
chr1	116260387	116260499	reg1001606.p2	6.028	+	AB057596 NM_001172412	-75194	+	NM_001172411 NM_138959 BC065272 AF481859	-75851	+	BC032517 NM_002506 X52599	-379590	-	CU692536 DQ893219 DQ896548 D55655 AK225959 TSC_hg19_v1_chr1_-_116311307	50791	-	TSC_hg19_v1_chr1_-_116311336 AK295502 BC022288 AK313041	50908	-	AK129891 TSC_hg19_v1_chr1_-_116311410 NM_001232 AK293595	50973	-	AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##DQ893219|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ896548|CASQ2|845|calsequestrin 2 (cardiac muscle)##D55655|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK225959|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK295502|CASQ2|845|calsequestrin 2 (cardiac muscle)##BC022288|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK313041|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK129891|CASQ2|845|calsequestrin 2 (cardiac muscle)##NM_001232|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK293595|CASQ2|845|calsequestrin 2 (cardiac muscle)	0.0	
chr19	15284704	15284812	reg1023537.p1	6.028	+	TSC_hg19_v1_chr19_-_15236518 U61263 BC011761 BC011722 NM_006844	-48222	-	BC000109 TSC_hg19_v1_chr19_-_15236004	-48770	-	BC126913 CU680024 CU680048 TSC_hg19_v1_chr19_-_15235944	-48912	-	TSC_hg19_v1_chr19_-_15311808 AB209447 NM_000435 U97669	27040	-	BC132958 BC132960 AK026061 NM_024794	58454	-	BC115002 NM_001142886	59054	-	U61263|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC011761|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC011722|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##NM_006844|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC000109|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC126913|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##AB209447|NOTCH3|4854|notch 3##NM_000435|NOTCH3|4854|notch 3##U97669|NOTCH3|4854|notch 3##BC132958|EPHX3|79852|epoxide hydrolase 3##BC132960|EPHX3|79852|epoxide hydrolase 3##AK026061|EPHX3|79852|epoxide hydrolase 3##NM_024794|EPHX3|79852|epoxide hydrolase 3##BC115002|EPHX3|79852|epoxide hydrolase 3##NM_001142886|EPHX3|79852|epoxide hydrolase 3	1.743139	CTCF.p2:18:0.819	CTCF.p2:-30:0.924
chr3	107379351	107379489	reg1023325.p2	6.028	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-137571	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-283110	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-419828	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	430453	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	561872	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	635981	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.922097	CTCF.p2:-13:0.922
chr3	56285432	56285537	reg1008354.p1	6.028	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-763866	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-764152	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-770076	-	BC111550 BC112391 AB002376 NM_015576	216893	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	305718	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	305762	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.998779	
chr8	42548007	42548149	reg1000029.p2	6.028	+	TSC_hg19_v1_chr8_-_42397069 BC028600 NM_006749	-151017	-	TSC_hg19_v1_chr8_+_42396791 NM_138436 BC013035 NM_001135674 NM_001135675	-151251	+	TSC_hg19_v1_chr8_-_42396648 AK314774	-151427	-	BC069681 BC069703 BC069788 NM_000749 Y08417 U62438 CU686976 CU686982	4547	+	NM_001199279 NM_004198	75850	-	AL832077 BC021721 AK223231 TSC_hg19_v1_chr8_-_42698469 AK001339 NM_018105 NM_199003	150383	-	BC028600|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##NM_006749|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##NM_138436|C8orf40|114926|chromosome 8 open reading frame 40##BC013035|C8orf40|114926|chromosome 8 open reading frame 40##NM_001135674|C8orf40|114926|chromosome 8 open reading frame 40##NM_001135675|C8orf40|114926|chromosome 8 open reading frame 40##AK314774|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##BC069681|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##BC069703|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##BC069788|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##NM_000749|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##Y08417|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##U62438|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##NM_001199279|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6##NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6##AL832077|THAP1|55145|THAP domain containing, apoptosis associated protein 1##BC021721|THAP1|55145|THAP domain containing, apoptosis associated protein 1##AK223231|THAP1|55145|THAP domain containing, apoptosis associated protein 1##AK001339|THAP1|55145|THAP domain containing, apoptosis associated protein 1##NM_018105|THAP1|55145|THAP domain containing, apoptosis associated protein 1##NM_199003|THAP1|55145|THAP domain containing, apoptosis associated protein 1	0.0	
chr10	17889865	17889990	reg1021214.p1	6.027	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	-38524	+	NM_001098844 BC157856	-95673	+	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	-203697	+	NM_001098844 BC157856	151294	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	208466	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	350902	+	BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	0.842456	CTCF.p2:-47:0.842
chr11	118767505	118767598	reg1021160.p2	6.027	+	NM_032966 X68829	-3451	+	AK291512 NM_001716 BC110352 X68149 AB464488	-12991	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-105617	-	AB094091 NM_182557	14061	-	NM_006760 Y13645 BC113900 AY455312 AB009454	59512	+	AB094092 NM_181721 BC028191 BC125040 BC038969	74927	+	NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_006760|UPK2|7379|uroplakin 2##Y13645|UPK2|7379|uroplakin 2##BC113900|UPK2|7379|uroplakin 2##AY455312|UPK2|7379|uroplakin 2##AB009454|UPK2|7379|uroplakin 2##AB094092|FOXR1|283150|forkhead box R1##NM_181721|FOXR1|283150|forkhead box R1##BC028191|FOXR1|283150|forkhead box R1##BC125040|FOXR1|283150|forkhead box R1##BC038969|FOXR1|283150|forkhead box R1	0.0	
chr1	118296816	118296947	reg1022809.p1	6.027	+	TSC_hg19_v1_chr1_+_118148669 AK000209 BC036516 BC131726	-148202	+	TSC_hg19_v1_chr1_+_118148542 NM_017709	-148295	+	TSC_hg19_v1_chr1_+_117910083 BC052954 AK307842 NM_006699 BC063300	-386788	+	TSC_hg19_v1_chr1_-_118472186 BC013132	175301	-	AK000149 BC013324 TSC_hg19_v1_chr1_-_118472244 NM_001135589 NM_017686	175372	-	BC058836 TSC_hg19_v1_chr1_+_118472357	175472	+	AK000209|FAM46C|54855|family with sequence similarity 46, member C##BC036516|FAM46C|54855|family with sequence similarity 46, member C##BC131726|FAM46C|54855|family with sequence similarity 46, member C##NM_017709|FAM46C|54855|family with sequence similarity 46, member C##BC052954|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##AK307842|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##NM_006699|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC063300|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC013132|GDAP2|54834|ganglioside induced differentiation associated protein 2##AK000149|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC013324|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_001135589|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_017686|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC058836|WDR3|10885|WD repeat domain 3	0.076225	
chr15	102195251	102195431	reg1022708.p1	6.027	+	TSC_hg19_v1_chr15_-_102192580 BC006150 BC008873 AF353992 AK315584 AK297048 AK026257 AK296553 NM_025141 NM_078474	-2875	-	TSC_hg19_v1_chr15_-_102030140 NM_002570 NM_138319 NM_138320 NM_138321 NM_138322 NM_138323 NM_138324 NM_138325	-165179	-	TSC_hg19_v1_chr15_-_102029995 M80482 M80482	-165308	-	TSC_hg19_v1_chr15_-_102264638 BC132671 BC136315 BC143943 AK056653 AX721055 NM_152334	69314	-	BC137002 BC137003 NM_001005326	150570	+	BC137064 BC137065 NM_001001674	163036	+	BC006150|TM2D3|80213|TM2 domain containing 3##BC008873|TM2D3|80213|TM2 domain containing 3##AF353992|TM2D3|80213|TM2 domain containing 3##AK315584|TM2D3|80213|TM2 domain containing 3##AK297048|TM2D3|80213|TM2 domain containing 3##AK026257|TM2D3|80213|TM2 domain containing 3##AK296553|TM2D3|80213|TM2 domain containing 3##NM_025141|TM2D3|80213|TM2 domain containing 3##NM_078474|TM2D3|80213|TM2 domain containing 3##NM_002570|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138319|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138320|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138321|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138322|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138323|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138324|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138325|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##BC132671|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC136315|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC143943|TARSL2|123283|threonyl-tRNA synthetase-like 2##AK056653|TARSL2|123283|threonyl-tRNA synthetase-like 2##NM_152334|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137064|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##BC137065|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##NM_001001674|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15	0.062011	
chr2	23127105	23127250	reg1023426.p2	6.027	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-1860248	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-1860278	-	TSC_hg19_v1_chr2_-_21266818 AB587530 HM487065 M14081 M14162 BC051278	-1860356	-	NM_052920	481120	+	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	1022769	-	TSC_hg19_v1_chr2_+_24150144 BC037901	1022980	+	AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##HM487065|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14081|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14162|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC051278|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A	0.997403	CTCF.p2:-6:0.997
chr2	56304754	56304931	reg1025078.p1	6.027	+	AK293058 NM_001039348 NM_001039349	-153557	-	TSC_hg19_v1_chr2_-_56150918 AK301531 BC014410 BC098561 AK301402 AK312639 AK092854 AK290599 AX747769	-153927	-	TSC_hg19_v1_chr2_-_55920980 BC053660 BC009057 AK027437 AY027528 AK307589 AJ458465 NM_033109	-383864	-	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	106363	+	AB384323 TSC_hg19_v1_chr2_+_56411776	106924	+	AK311113 TSC_hg19_v1_chr2_-_56412914	108067	-	AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301531|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC014410|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC098561|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301402|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK312639|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK092854|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK290599|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC053660|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##BC009057|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AY027528|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AK307589|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AJ458465|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##NM_033109|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK311113|LOC100129434|100129434|uncharacterized LOC100129434	0.939414	CTCF.p2:19:0.939
chr5	97685511	97685636	reg1022363.p1	6.027	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-1166586	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-1166631	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	-1166665	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	419468	+	BC054860 BC117134 NM_001270 AF006513	576655	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	2185500	+	NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A	0.359267	CTCF.p2:24:0.359
chr6	65215324	65215448	reg1024451.p2	6.027	+	AF091622 BC113650 BC113652 NM_015153 D87685 AB385299	-858944	+	TSC_hg19_v1_chr6_+_64346027 BX648268 AK290491	-869369	+	TSC_hg19_v1_chr6_+_64345729 AK315868 AK298580	-869563	+	AY358133 NM_198283 AK310478	1074319	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	1201707	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	3383642	-	AF091622|PHF3|23469|PHD finger protein 3##BC113650|PHF3|23469|PHD finger protein 3##BC113652|PHF3|23469|PHD finger protein 3##NM_015153|PHF3|23469|PHD finger protein 3##D87685|PHF3|23469|PHD finger protein 3##BX648268|PHF3|23469|PHD finger protein 3##AK290491|PHF3|23469|PHD finger protein 3##AK315868|PHF3|23469|PHD finger protein 3##AK298580|PHF3|23469|PHD finger protein 3##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3	0.516263	CTCF.p2:19:0.516
chr12	101884200	101884331	reg1023428.p1	6.026	+	TSC_hg19_v1_chr12_-_101801573 AK311793 AK302911 AK299062 BC007000 BX537387 NM_001177	-82722	-	TSC_hg19_v1_chr12_+_101673904 NM_014503 AK307934 AJ006778	-210360	+	AK313788 AF536216 AY081220 NM_145913	-280266	-	AK296681 NM_002465 NM_206819 NM_206820 NM_206821 AK056587 AK292976 AK295727 AK303401 BC015187 BC030980 BC065720 TSC_hg19_v1_chr12_+_101988748 BC092418 X66276 X73114 AL831993 AL832000 AL832332 AL832350 AL832354 AL832456 BC117217 BC143495 BC143502 BC143503 BC143504 AL834249 BX649073 AB385254 AM392734 EU831907 EU832001	104531	+	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	207357	+	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	248954	-	AK311793|ARL1|400|ADP-ribosylation factor-like 1##AK302911|ARL1|400|ADP-ribosylation factor-like 1##AK299062|ARL1|400|ADP-ribosylation factor-like 1##BC007000|ARL1|400|ADP-ribosylation factor-like 1##BX537387|ARL1|400|ADP-ribosylation factor-like 1##NM_001177|ARL1|400|ADP-ribosylation factor-like 1##NM_014503|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK307934|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AJ006778|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK313788|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AF536216|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AY081220|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_145913|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AK296681|MYBPC1|4604|myosin binding protein C, slow type##NM_002465|MYBPC1|4604|myosin binding protein C, slow type##NM_206819|MYBPC1|4604|myosin binding protein C, slow type##NM_206820|MYBPC1|4604|myosin binding protein C, slow type##NM_206821|MYBPC1|4604|myosin binding protein C, slow type##AK056587|MYBPC1|4604|myosin binding protein C, slow type##AK292976|MYBPC1|4604|myosin binding protein C, slow type##AK295727|MYBPC1|4604|myosin binding protein C, slow type##AK303401|MYBPC1|4604|myosin binding protein C, slow type##BC015187|MYBPC1|4604|myosin binding protein C, slow type##BC030980|MYBPC1|4604|myosin binding protein C, slow type##BC065720|MYBPC1|4604|myosin binding protein C, slow type##BC092418|MYBPC1|4604|myosin binding protein C, slow type##X66276|MYBPC1|4604|myosin binding protein C, slow type##X73114|MYBPC1|4604|myosin binding protein C, slow type##AL831993|MYBPC1|4604|myosin binding protein C, slow type##AL832000|MYBPC1|4604|myosin binding protein C, slow type##AL832332|MYBPC1|4604|myosin binding protein C, slow type##AL832350|MYBPC1|4604|myosin binding protein C, slow type##AL832354|MYBPC1|4604|myosin binding protein C, slow type##AL832456|MYBPC1|4604|myosin binding protein C, slow type##BC117217|MYBPC1|4604|myosin binding protein C, slow type##BC143495|MYBPC1|4604|myosin binding protein C, slow type##BC143502|MYBPC1|4604|myosin binding protein C, slow type##BC143503|MYBPC1|4604|myosin binding protein C, slow type##BC143504|MYBPC1|4604|myosin binding protein C, slow type##AL834249|MYBPC1|4604|myosin binding protein C, slow type##BX649073|MYBPC1|4604|myosin binding protein C, slow type##AM392734|MYBPC1|4604|myosin binding protein C, slow type##EU831907|MYBPC1|4604|myosin binding protein C, slow type##EU832001|MYBPC1|4604|myosin binding protein C, slow type##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3	0.0	
chr15	69557844	69557952	reg1024097.p1	6.026	+	TSC_hg19_v1_chr15_+_69452935 BC142975 AY635582 NM_015554 AK098595 BC033828 BC019011	-105000	+	NM_001184779 NM_024505 AF353088 AF353089 AK314689 AK074071	-250847	+	NM_001184780 NM_145658 AY358983 AF325189 AF325190 BC017998 AF275321 BC125097 BC125098 CU676134	-334983	+	TSC_hg19_v1_chr15_+_69591278 BC039234 NM_017705	33390	+	AK000197 AY424283 NM_001104554	48843	+	TSC_hg19_v1_chr15_+_69706649 NM_004856 NM_138555 BC051826 AK308322	148747	+	AY635582|GLCE|26035|glucuronic acid epimerase##NM_015554|GLCE|26035|glucuronic acid epimerase##NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_001184780|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_145658|SPESP1|246777|sperm equatorial segment protein 1##AY358983|SPESP1|246777|sperm equatorial segment protein 1##AF325189|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF325190|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC017998|SPESP1|246777|sperm equatorial segment protein 1##AF275321|SPESP1|246777|sperm equatorial segment protein 1##BC125097|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC125098|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC039234|PAQR5|54852|progestin and adipoQ receptor family member V##NM_017705|PAQR5|54852|progestin and adipoQ receptor family member V##AK000197|PAQR5|54852|progestin and adipoQ receptor family member V##AY424283|PAQR5|54852|progestin and adipoQ receptor family member V##NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V##NM_004856|KIF23|9493|kinesin family member 23##NM_138555|KIF23|9493|kinesin family member 23##BC051826|KIF23|9493|kinesin family member 23##AK308322|KIF23|9493|kinesin family member 23	0.721491	CTCF.p2:-4:0.721
chr16	14836229	14836364	reg1021981.p1	6.026	+	BC106731 BC106732 BC111804 NM_003561 U95301	-47819	-	TSC_hg19_v1_chr16_+_14726837 BC003054 AK291114 AK297067	-109453	+	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	-109557	+	TSC_hg19_v1_chr16_+_14927651 NM_014287 BC065535	91347	+	TSC_hg19_v1_chr16_+_14927721 X57398	91464	+	AB528194 AF132984 NM_006985	195003	+	BC106731|PLA2G10|8399|phospholipase A2, group X##BC106732|PLA2G10|8399|phospholipase A2, group X##BC111804|PLA2G10|8399|phospholipase A2, group X##NM_003561|PLA2G10|8399|phospholipase A2, group X##U95301|PLA2G10|8399|phospholipase A2, group X##BC003054|BFAR|51283|bifunctional apoptosis regulator##AK291114|BFAR|51283|bifunctional apoptosis regulator##AK297067|BFAR|51283|bifunctional apoptosis regulator##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator##NM_014287|NOMO1|23420|NODAL modulator 1##BC065535|NOMO1|23420|NODAL modulator 1##X57398|NOMO1|23420|NODAL modulator 1##AF132984|NPIP|9284|nuclear pore complex interacting protein##NM_006985|NPIP|9284|nuclear pore complex interacting protein	0.069875	
chr6	132036989	132037078	reg1021512.p1	6.026	+	NM_001145659	-4877	-	BC120953 BC120954 NM_030908	-14493	-	AK024899 AK296080 AK310691 AK315893 NM_005021 AK292903 EF560735 AF005632 AB587329 DQ234347	-78551	+	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	92128	+	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	92228	+	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	235381	-	NM_001145659|CTAGE9|643854|CTAGE family, member 9##BC120953|OR2A4|79541|olfactory receptor, family 2, subfamily A, member 4##BC120954|OR2A4|79541|olfactory receptor, family 2, subfamily A, member 4##NM_030908|OR2A4|79541|olfactory receptor, family 2, subfamily A, member 4##AK024899|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK296080|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK310691|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK315893|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##NM_005021|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##AK292903|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##EF560735|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##DQ234347|ENPP3|5169|ectonucleotide pyrophosphatase/phosphodiesterase 3##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor	0.025356	
chr7	26118649	26118752	reg1022097.p1	6.026	+	AB040290 AF330057 AF440392 NM_022150	-850620	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-898829	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-953760	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	73233	+	TSC_hg19_v1_chr7_-_26232151 BX538099	113451	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	121641	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.0	
chr7	43994248	43994369	reg1022026.p1	6.026	+	TSC_hg19_v1_chr7_+_43966046 NM_015983 BC004104 AK001446 AF125045 AB528947 CU678576	-28239	+	TSC_hg19_v1_chr7_-_43966000 NM_001077664 AK302459	-28331	-	TSC_hg19_v1_chr7_-_43946217 CR749398 NM_001077663 NM_001204871 NM_017920	-47978	-	AF412027 NM_175064	46179	+	TSC_hg19_v1_chr7_-_44058749 BC062722 BX537878 BX538054 BC017341 BC017250 BC105584 AK296066	64469	-	TSC_hg19_v1_chr7_+_44078680 BC081571 BC024303	84441	+	NM_015983|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##BC004104|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##AK001446|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##AF125045|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##NM_001077664|URGCP|55665|upregulator of cell proliferation##AK302459|URGCP|55665|upregulator of cell proliferation##CR749398|URGCP|55665|upregulator of cell proliferation##NM_001077663|URGCP|55665|upregulator of cell proliferation##NM_001204871|URGCP-MRPS24|100534592|URGCP-MRPS24 readthrough##NM_017920|URGCP|55665|upregulator of cell proliferation##AF412027|SPDYE1|285955|speedy homolog E1 (Xenopus laevis)##NM_175064|SPDYE1|285955|speedy homolog E1 (Xenopus laevis)##BC062722|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BX537878|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BX538054|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC017341|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC017250|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC105584|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##AK296066|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC081571|FLJ35390|255031|uncharacterized LOC255031##BC024303|FLJ35390|255031|uncharacterized LOC255031	0.931113	CTCF.p2:7:0.931
chr17	10252864	10252999	reg1028319.p1	6.025	+	TSC_hg19_v1_chr17_-_10101924 AY327406 NM_201433	-151025	-	TSC_hg19_v1_chr17_-_9940004 AK057761 BC006454 NM_201432	-312898	-	TSC_hg19_v1_chr17_-_9939883 AK292987	-313053	-	AF111782 NM_003802	23390	-	AK303395 NM_002472	72335	-	AF111783 NM_017533	119944	-	AY327406|GAS7|8522|growth arrest-specific 7##NM_201433|GAS7|8522|growth arrest-specific 7##AK057761|GAS7|8522|growth arrest-specific 7##BC006454|GAS7|8522|growth arrest-specific 7##NM_201432|GAS7|8522|growth arrest-specific 7##AK292987|GAS7|8522|growth arrest-specific 7##AF111782|MYH13|8735|myosin, heavy chain 13, skeletal muscle##NM_003802|MYH13|8735|myosin, heavy chain 13, skeletal muscle##AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle	0.986422	CTCF.p2:-11:0.986
chr7	151215326	151215507	reg1024108.p1	6.025	+	BC100878 BC100879 BC100880 BC100881 AF445455 NM_144727	-78321	-	TSC_hg19_v1_chr7_-_151107122 NM_198285	-108295	-	AK056624 TSC_hg19_v1_chr7_-_151071775	-143680	-	AB528681 AF493921 BT006958 CU688134 D78132 Z29677 TSC_hg19_v1_chr7_-_151216661	1213	-	TSC_hg19_v1_chr7_-_151216740 AK289370 AF148645	1302	-	TSC_hg19_v1_chr7_-_151216769 BC066307	1353	-	BC100878|CRYGN|155051|crystallin, gamma N##BC100879|CRYGN|155051|crystallin, gamma N##BC100880|CRYGN|155051|crystallin, gamma N##BC100881|CRYGN|155051|crystallin, gamma N##AF445455|CRYGN|155051|crystallin, gamma N##NM_144727|CRYGN|155051|crystallin, gamma N##NM_198285|WDR86|349136|WD repeat domain 86##AF493921|RHEB|6009|Ras homolog enriched in brain##BT006958|RHEB|6009|Ras homolog enriched in brain##D78132|RHEB|6009|Ras homolog enriched in brain##Z29677|RHEB|6009|Ras homolog enriched in brain##AK289370|RHEB|6009|Ras homolog enriched in brain##AF148645|RHEB|6009|Ras homolog enriched in brain##BC066307|RHEB|6009|Ras homolog enriched in brain	0.0	
chr7	6629492	6629606	reg1021506.p1	6.025	+	TSC_hg19_v1_chr7_+_6617111 AK223532 NM_001134387 NM_001134388 NM_001134389 NM_018106 AK001341 AK308971 AL136674 BC001239 AY359090	-12431	+	NM_001145118	-38483	-	DQ892879 DQ896128 CU675925 CU680460 CU687206 X63745 TSC_hg19_v1_chr7_-_6523784 BC008081 BC012994 BC071982 AK127440 AK315702 NM_001100603 NM_006854	-105781	-	TSC_hg19_v1_chr7_+_6629662 BC001076 BC005121 AK056149 NM_024067	237	+	NM_017560	25977	+	TSC_hg19_v1_chr7_-_6746579 BC051892 BC154414 AB021643 NM_006956 NM_016265 AK293925	117031	-	AK223532|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134387|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134388|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134389|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_018106|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK001341|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK308971|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AL136674|ZDHHC4|55146|zinc finger, DHHC-type containing 4##BC001239|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AY359090|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001145118|GRID2IP|392862|glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein##DQ892879|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##DQ896128|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##X63745|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC008081|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC012994|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC071982|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##AK315702|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##NM_001100603|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##NM_006854|KDELR2|11014|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 2##BC001076|C7orf26|79034|chromosome 7 open reading frame 26##BC005121|C7orf26|79034|chromosome 7 open reading frame 26##AK056149|C7orf26|79034|chromosome 7 open reading frame 26##NM_024067|C7orf26|79034|chromosome 7 open reading frame 26##NM_017560|ZNF853|54753|zinc finger protein 853##BC051892|ZNF12|7559|zinc finger protein 12##BC154414|ZNF12|7559|zinc finger protein 12##AB021643|ZNF12|7559|zinc finger protein 12##NM_006956|ZNF12|7559|zinc finger protein 12##NM_016265|ZNF12|7559|zinc finger protein 12##AK293925|ZNF12|7559|zinc finger protein 12	0.982529	CTCF.p2:27:0.983
chr1	153892863	153892983	reg1024240.p2	6.024	+	BC003041 BC009916 NM_024330 AK075377 TSC_hg19_v1_chr1_+_153747897 AK123997 AY358409 AK074134 DQ893429 DQ895951 AK027499 BC029792	-145057	+	TSC_hg19_v1_chr1_+_153700548 BX640950 CR749376 CR627233 BC116458 AK290025 CR749212 BX640786 NM_023015	-192370	+	TSC_hg19_v1_chr1_+_153651222 BC063304 AK025024 NM_000906 X15357	-241627	+	AK094665 NM_020699 TSC_hg19_v1_chr1_-_153895452	2528	-	TSC_hg19_v1_chr1_-_153919148 AB007945 NM_014856	26223	-	AY726597 AK096382 BC053562 TSC_hg19_v1_chr1_-_153931074 AF289574	38070	-	BC003041|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC009916|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##NM_024330|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK075377|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK123997|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AY358409|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK074134|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ893429|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ895951|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK027499|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC029792|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BX640950|INTS3|65123|integrator complex subunit 3##CR749376|INTS3|65123|integrator complex subunit 3##CR627233|INTS3|65123|integrator complex subunit 3##BC116458|INTS3|65123|integrator complex subunit 3##AK290025|INTS3|65123|integrator complex subunit 3##CR749212|INTS3|65123|integrator complex subunit 3##BX640786|INTS3|65123|integrator complex subunit 3##NM_023015|INTS3|65123|integrator complex subunit 3##BC063304|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##AK025024|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##NM_000906|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##X15357|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B##NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B##AB007945|DENND4B|9909|DENN/MADD domain containing 4B##NM_014856|DENND4B|9909|DENN/MADD domain containing 4B##AY726597|CRTC2|200186|CREB regulated transcription coactivator 2##AK096382|CRTC2|200186|CREB regulated transcription coactivator 2##BC053562|CRTC2|200186|CREB regulated transcription coactivator 2##AF289574|CRTC2|200186|CREB regulated transcription coactivator 2	0.569554	CTCF.p2:-3:0.570
chr5	112184062	112184188	reg1023689.p2	6.024	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	-110552	+	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	-140914	+	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	-429252	-	NM_001204193 NM_001204194 NM_001204196 NM_001204199 NM_003135 TSC_hg19_v1_chr5_+_112196975	12804	+	TSC_hg19_v1_chr5_+_112196983 AK311803 BC000186 X12791 AK313576 BC017830 BC010947 BC018669 AB587423	12899	+	CU688102 AY562243 BC065926 TSC_hg19_v1_chr5_-_112257925 BC000232 M74090 AK295436 AK298268 AK299902 AK300048 AK312522 M73547 AX775929 BX648005 NM_005669	73862	-	NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_001204193|SRP19|6728|signal recognition particle 19kDa##NM_001204194|SRP19|6728|signal recognition particle 19kDa##NM_001204196|SRP19|6728|signal recognition particle 19kDa##NM_001204199|SRP19|6728|signal recognition particle 19kDa##NM_003135|SRP19|6728|signal recognition particle 19kDa##AK311803|SRP19|6728|signal recognition particle 19kDa##BC000186|SRP19|6728|signal recognition particle 19kDa##X12791|SRP19|6728|signal recognition particle 19kDa##BC017830|SRP19|6728|signal recognition particle 19kDa##BC010947|SRP19|6728|signal recognition particle 19kDa##BC018669|SRP19|6728|signal recognition particle 19kDa##AY562243|REEP5|7905|receptor accessory protein 5##BC065926|REEP5|7905|receptor accessory protein 5##BC000232|REEP5|7905|receptor accessory protein 5##M74090|REEP5|7905|receptor accessory protein 5##AK295436|REEP5|7905|receptor accessory protein 5##AK298268|REEP5|7905|receptor accessory protein 5##AK299902|REEP5|7905|receptor accessory protein 5##AK312522|REEP5|7905|receptor accessory protein 5##BX648005|REEP5|7905|receptor accessory protein 5##NM_005669|REEP5|7905|receptor accessory protein 5	0.386883	CTCF.p2:7:0.387
chr18	13558340	13558520	reg1003592.p2	6.023	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-339645	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-567085	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-610366	+	NM_001003674 NM_001003675	53234	+	AF009426 AF009427 NM_004338 NM_181483	62436	+	TSC_hg19_v1_chr18_-_13726549 AK055618	168076	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.174619	
chr19	47019199	47019313	reg1023611.p1	6.023	+	TSC_hg19_v1_chr19_-_46999149 AK124720 NM_020709	-20095	-	TSC_hg19_v1_chr19_-_46974789 BC032508 NM_001103149 NM_018215	-44451	-	AL834344 TSC_hg19_v1_chr19_-_46974751 AK290218 BC051688	-44534	-	TSC_hg19_v1_chr19_+_47104390 BC006182	85141	+	AK094504 NM_001205281	85200	-	TSC_hg19_v1_chr19_+_47104543 NM_005184	85264	+	AK124720|PNMAL2|57469|PNMA-like 2##NM_020709|PNMAL2|57469|PNMA-like 2##BC032508|PNMAL1|55228|PNMA-like 1##NM_001103149|PNMAL1|55228|PNMA-like 1##NM_018215|PNMAL1|55228|PNMA-like 1##AL834344|PNMAL1|55228|PNMA-like 1##AK290218|PNMAL1|55228|PNMA-like 1##BC051688|PNMAL1|55228|PNMA-like 1##BC006182|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##AK094504|LOC100506012|100506012|serine/threonine-protein phosphatase 5-like##NM_001205281|LOC100506012|100506012|serine/threonine-protein phosphatase 5-like##NM_005184|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)	0.998288	CTCF.p2:8:0.998
chr6	56179587	56179758	reg1022932.p1	6.023	+	TSC_hg19_v1_chr6_-_56112350 BC045597 AF414088 AL136624 AK313398 NM_030820	-67311	-	TSC_hg19_v1_chr6_-_56112233 BC126108 BC143862 BC143863 BC143864 BC143865 AK126586	-67436	-	AK291559 TSC_hg19_v1_chr6_-_55740389	-439283	-	AF330693 TSC_hg19_v1_chr6_-_56258945	79252	-	BC038763 TSC_hg19_v1_chr6_-_56407722	228036	-	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	327967	-	BC045597|COL21A1|81578|collagen, type XXI, alpha 1##AF414088|COL21A1|81578|collagen, type XXI, alpha 1##AL136624|COL21A1|81578|collagen, type XXI, alpha 1##AK313398|COL21A1|81578|collagen, type XXI, alpha 1##NM_030820|COL21A1|81578|collagen, type XXI, alpha 1##BC126108|COL21A1|81578|collagen, type XXI, alpha 1##BC143862|COL21A1|81578|collagen, type XXI, alpha 1##BC143863|COL21A1|81578|collagen, type XXI, alpha 1##BC143864|COL21A1|81578|collagen, type XXI, alpha 1##BC143865|COL21A1|81578|collagen, type XXI, alpha 1##AK126586|COL21A1|81578|collagen, type XXI, alpha 1##AK291559|BMP5|653|bone morphogenetic protein 5##AF330693|COL21A1|81578|collagen, type XXI, alpha 1##AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin	0.988282	CTCF.p2:8:0.988
chr11	1970345	1970426	reg1022432.p1	6.021	+	BC027710 TSC_hg19_v1_chr11_+_1968589	-1796	+	TSC_hg19_v1_chr11_+_1968573 NM_021134 U26596 Z49254 AK313805 AK128774	-1844	+	NM_001042780 NM_001042781 NM_001042782 NM_006757 BC062430 TSC_hg19_v1_chr11_+_1940935 BX640689 BC050446 AK056968	-29498	+	BC106079 BC010185 TSC_hg19_v1_chr11_-_2016854	46413	-	BC009853 AK123560 BC013067 TSC_hg19_v1_chr11_-_2017955	47504	-	BC006831 BC007513 TSC_hg19_v1_chr11_-_2018387 BC053637 BC023213	47990	-	BC027710|MRPL23|6150|mitochondrial ribosomal protein L23##NM_021134|MRPL23|6150|mitochondrial ribosomal protein L23##U26596|MRPL23|6150|mitochondrial ribosomal protein L23##Z49254|MRPL23|6150|mitochondrial ribosomal protein L23##AK313805|MRPL23|6150|mitochondrial ribosomal protein L23##AK128774|MRPL23|6150|mitochondrial ribosomal protein L23##NM_001042780|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042781|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042782|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_006757|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC062430|TNNT3|7140|troponin T type 3 (skeletal, fast)##BX640689|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC050446|TNNT3|7140|troponin T type 3 (skeletal, fast)##AK056968|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC010185|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC009853|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AK123560|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC013067|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC006831|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC007513|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC053637|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC023213|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)	0.021015	
chr1	208412505	208412622	reg1021242.p1	6.021	+	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-328006	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-328180	-	BX640941 TSC_hg19_v1_chr1_-_208059392	-353240	-	TSC_hg19_v1_chr1_-_208417635 NM_025179	5086	-	AK091113 AX746785 NM_001104548	1189602	+	NM_020439 AK095713 AK289675 AF428261 BC032787	1344497	+	BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_025179|PLXNA2|5362|plexin A2##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	0.857607	CTCF.p2:0:0.858
chr6_dbb_hap3	3941668	3941799	reg1023575.p1	6.021	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.517049	CTCF.p2:10:0.517
chr9	215029	215210	reg1021659.p1	6.021	+	AK293353 TSC_hg19_v1_chr9_+_214867	-240	+	TSC_hg19_v1_chr9_+_214864 AB191037 NM_203447	-257	+	TSC_hg19_v1_chr9_+_214847 BC043265	-288	+	NM_152569	773	-	TSC_hg19_v1_chr9_+_273045 HM991479 NM_001190458 NM_001193536 AK093572 AX748209 HM991480 BC045629 AK310555 BC130518 BC143929	57934	+	TSC_hg19_v1_chr9_+_504732 BX648931 AL832454 NM_015158 AK292989 AL833161 AK290028 AB205106	289629	+	AK293353|DOCK8|81704|dedicator of cytokinesis 8##AB191037|DOCK8|81704|dedicator of cytokinesis 8##NM_203447|DOCK8|81704|dedicator of cytokinesis 8##BC043265|DOCK8|81704|dedicator of cytokinesis 8##NM_152569|C9orf66|157983|chromosome 9 open reading frame 66##HM991479|DOCK8|81704|dedicator of cytokinesis 8##NM_001190458|DOCK8|81704|dedicator of cytokinesis 8##NM_001193536|DOCK8|81704|dedicator of cytokinesis 8##AK093572|DOCK8|81704|dedicator of cytokinesis 8##HM991480|DOCK8|81704|dedicator of cytokinesis 8##BC045629|DOCK8|81704|dedicator of cytokinesis 8##AK310555|DOCK8|81704|dedicator of cytokinesis 8##BC130518|DOCK8|81704|dedicator of cytokinesis 8##BC143929|DOCK8|81704|dedicator of cytokinesis 8##BX648931|KANK1|23189|KN motif and ankyrin repeat domains 1##AL832454|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_015158|KANK1|23189|KN motif and ankyrin repeat domains 1##AK292989|KANK1|23189|KN motif and ankyrin repeat domains 1##AL833161|KANK1|23189|KN motif and ankyrin repeat domains 1##AK290028|KANK1|23189|KN motif and ankyrin repeat domains 1##AB205106|KANK1|23189|KN motif and ankyrin repeat domains 1	0.0	
chr14	107061963	107062099	reg1022076.p2	6.020	+	AF028099 AF460754 DQ454615 DQ523869 GQ232779 GQ232881 GU552765 FJ873979 FJ873984 FJ874049 FJ874062 FJ874084 DQ454628 AY003743 AY003830 DQ523889 DQ523867 DQ454655 DQ523892 DQ523925 FJ840112 FJ840322 FJ873963 DQ454805 DQ523873 FJ840063 FJ840064 FJ840091 FJ840093 FJ840096 FJ840098 FJ840147 FJ840240 FJ840275 FJ840277 FJ840278 FJ840279 FJ840280 FJ840281 FJ840282 FJ840283 FJ840285 FJ840286 FJ840288 FJ840289 FJ840290 FJ840291 FJ840294 FJ840296 FJ840298 FJ840299 FJ840300 FJ840301 FJ840303 FJ873817 FJ873838 FJ873840 FJ873886 FJ873926 FJ873934 FJ874029 FJ874031 FJ874050 FJ874058 AJ008233 DQ523926 AY003838 AY003851 EF175410 EF091918 EU667609 JF810270 EU099077 EU099148 AF103213 AJ010335 AM183984 DQ097899 HM774214 EF555586 AF062229 FJ385338 FJ385339 FJ385347 GQ504915 GQ504957 HM774086 HM774115 HM774155 HM774774 EU146321 S73143 U85229 AY062306 AF035787 AF035788 DQ100793 DQ100813 AY941912 DQ187711 DQ524134 DQ926275 HM995353 HM995355 HM995441 HM995442 HM995443 HM995444 HM995445 HM995446 HM995470 HM995471 HM995475 HM995476 HM996019 HM996347 DQ187673 DQ322745 DQ322877 DQ322968 DQ322969 DQ322970 DQ322971 DQ322972 U00540 AB373623 AY530312 AY530316 AY686913 AY941884 AY986398 DQ100978 DQ926080 DQ926111 DQ926299 DQ926303 DQ926575 DQ926577 DQ926583 DQ926598 AB066888 AB067000 AB363089 AB363160 AB373617 AB373626 AF006517 AF006525 AF035042 AF174059 AF471510 AF471512 AF471528 AF471529 AF471530 AJ389169 AJ488540 AJ556641 AJ579109 AJ579266 AY640512 AY686909 AY941887 AY941891 AY941915 DQ535286 DQ535377 DQ535410 DQ926146 DQ926152 DQ926467 EF177944 EF177957 EF178005 EF178011 EF178016 EF178078 EF178107 FJ195522 FJ773245 FJ773246 GU570355 HM152495 HM152503 HM152507 HM451460 S76131 U00490 U00498 U00567 X62958 X64243 X77472 X99353 Z33902 Z33904 Z96964 M18520 M18521 HM995907 AY393055 AF062122 AJ548507 AY190822 X81724 X81730 X81735 L08085 BC072419 X61011 AK092785 AX747729 TSC_hg19_v1_chr14_-_107049194	-13086	-	AF267786 AF460742 AF460743 DQ454547 DQ454549 DQ454453 DQ454546 DQ454587 DQ454772 DQ523855 DQ454644 GU552737 DQ454456 DQ454588 DQ454927 EU433863 DQ454420 DQ454430 DQ454879 DQ454417 DQ454704 DQ454916 DQ454924 DQ454969 GU552772 DQ454423 DQ455004 EU099273 GU552771 DQ454935 DQ523903 DQ454770 DQ454843 FJ840010 FJ840025 FJ840144 FJ840161 FJ840267 FJ840276 FJ840292 FJ840293 FJ840346 FJ840350 FJ840358 FJ840360 FJ840363 FJ873816 FJ873820 FJ873848 FJ873865 FJ873868 FJ873928 FJ873940 FJ873954 FJ873964 FJ873985 FJ874015 FJ874045 FJ874091 GQ232837 HM116178 HM116213 HM116223 AJ008166 EU433880 GQ232769 GQ232840 GQ232959 EF175426 FJ694889 EF441751 EF441753 AY998718 U44492 U44503 U44504 U44505 AF017462 AJ008170 AJ008172 AJ008178 AJ008203 AJ487495 AJ230634 AJ230635 AJ230636 AJ230637 AJ230638 AJ230640 AJ230641 AJ230642 AJ230643 AJ230644 AJ230646 AJ230649 AJ230652 AJ230655 AJ230656 AJ230657 M34028 AY577299 S73611 S73613 FJ385326 GQ232913 GQ232958 GU552732 GU552750 AM279543 AF085655 AF085656 EU099270 AM233802 AM233804 EU099059 EU099279 EU099288 GQ232907 AF209895 AF209899 AF211932 AF343357 AF343358 AF343374 AF343390 AF343395 AF343401 AF343405 AF343419 AF343420 U86784 AJ862553 AJ862555 AJ862556 AJ862558 AJ862559 AJ862560 AJ862561 AJ862562 AJ862563 AJ862564 AJ862566 AJ862569 AJ862573 AM233783 AM233785 AM233805 AM233806 AM233807 AM233841 AY062302 HM774009 HM996214 AF103038 EU099234 HM773977 HM774742 AY062301 HM773976 HM774100 HM774513 HM774833 HM775004 HQ704065 HQ704066 HQ704067 HQ704068 AF103039 HM774204 HM774915 JN110745 JN110851 JN111173 JN111174 JN111195 JN111203 JN111206 JN111213 L04327 L04331 FJ385346 FJ385432 HM774001 HM774101 HM774244 HM774256 HM774288 HM774294 HM774334 HM774417 HM774549 HM774581 HM774591 HM774745 HM774776 HM774778 HM774796 HM774808 HM774855 HM774958 HM774983 HQ704004 HQ704052 HM775063 Z46853 AF103177 DQ524149 EU146312 EU146344 EU146346 EU146382 AB067195 AF103056 AY393315 AY393569 AY393571 EU099233 AF306373 AJ580927 AY062322 AY376089 U70236 AY393249 AY393314 AY393316 AY393318 AY393319 AY393320 AY393321 AY393455 AY393456 AY393457 AY393458 AY393459 AY393463 AY393466 AY393471 AY393566 AY393567 AY393568 AY393570 AY393572 AY393573 EU099231 EU099232 M34022 U00574 AF110479 AY062303 DQ926264 DQ926266 DQ926273 AF129750 AM233827 AM233828 AM233830 AM233831 AM233832 AM233833 AM233836 AM233838 AY640515 AB066833 AY941987 DQ168569 HM996472 HQ378399 AF021959 AJ239373 AJ272398 AJ555263 AY685303 DQ100803 DQ490742 DQ523920 DQ523934 DQ523971 DQ524022 DQ524049 DQ524147 DQ524150 DQ524160 DQ926054 GU570396 GU570398 HM995095 HM995420 HM995456 HM995460 HM995529 HM995571 HM995573 HM995577 HM995607 HM995969 HM996171 HM996234 HM996245 HM996273 HM996421 HM996528 HM996547 HQ378338 U77555 X94019 X94043 Z46759 HM995213 AB063835 AB063897 AB063925 AB066826 AB066832 AB066935 AB067154 AB067157 AB067159 AB067175 AB067326 AB067330 AB067334 AB067392 AB245095 AF174110 AF394197 AM279622 AY640502 AY640546 AY941916 AY941923 AY941958 AY971039 AY971068 AY971072 AY971073 AY971085 AY971113 AY971118 AY971121 AY971122 DQ100861 DQ100955 DQ100988 DQ490743 DQ926034 DQ926082 DQ926086 DQ926177 DQ926233 DQ926269 DQ926292 DQ926295 DQ926339 DQ926351 DQ926360 DQ926597 DQ926609 DQ926637 DQ926643 DQ926654 EU794427 EU794430 EU794443 FJ385310 FJ385369 GU570400 GU570406 HQ378329 HQ378361 HQ378384 X61649 AB063926 AB066971 AB066985 AB067015 AB067070 AB067074 AB067100 AB067116 AB067125 AB067129 AB067241 AF062125 AF062157 AF078940 AF078941 AF099197 AF110480 AF110484 AF110486 AF110487 AF174068 AF442760 AJ002767 AJ002771 AJ002772 AJ002773 AJ002774 AJ002775 AJ006165 AJ249378 AJ249636 AJ276099 AJ399826 AJ414007 AJ491906 AJ491907 AJ491913 AJ491914 AJ555254 AY033242 AY033243 AY033250 AY033274 AY033275 AY033276 AY033281 AY033282 AY033286 AY033288 AY640520 AY781870 AY941877 AY941878 AY941879 AY941919 AY941920 AY941921 AY971098 DQ065619 DQ065621 DQ065625 DQ065655 DQ065657 DQ065658 DQ205181 DQ379476 DQ490737 DQ490744 DQ926149 DQ926201 DQ926390 DQ926391 DQ926462 DQ926465 DQ926503 DQ926525 DQ926533 DQ926560 HM152490 HQ378409 L12198 L26537 U22381 U44493 U77538 U77539 U77541 U77544 U77547 U77548 U77549 U77550 U77551 U77552 U77553 U77557 U77558 U77559 U77560 U77561 U77562 U77563 U77564 U77565 U77566 U77567 X87447 X94002 X94004 X94005 X94006 X94028 X94029 X94030 X94031 X94032 X94038 X94039 X94041 X94044 X94045 X94046 X94048 X94050 X94051 X94052 X94053 X94055 X94058 X94059 X94061 X94062 X94063 X94066 X94071 X94072 X94073 X94077 Z46760 Z97037 DQ535275 DQ535319 DQ535340 DQ535347 DQ535361 DQ535401 DQ535430 DQ535447 DQ535450 DQ535454 DQ535458 DQ926623 EF177983 EF177986 EF178042 EF178049 EF178067 EF178105 FJ195497 FJ195499 FJ195517 FJ195521 FJ195527 FJ195537 JN252502 Z26829 Z26830 Z26832 Z26833 Z26839 Z26842 Z26843 Z26844 HM995790 HM995656 HM995886 M27125 U77535 U77543 U77554 U77556 AY393198 AY393202 HM995637 HM995880 AY392957 AY392958 AY392962 AY392964 AY392965 AY392966 AY392968 AY392969 AY392970 AY392976 AY392978 AY392980 AY392984 AY393084 AY393086 AY393087 AY393088 AY393090 AY393092 AY393094 AY393096 AY393097 AY393185 AY393186 AY393187 AY393188 AY393189 AY393191 AY393192 AY393193 AY393194 AY393195 AY393196 AY393197 AY393199 AY393200 AY393201 AY393203 AY393204 AF085657 AF085658 AF085659 AM233808 AF052379 AF062154 AF062214 AF348829 AF348830 AF348831 AF348832 AF348833 AF348834 AJ131060 AM233779 AM233780 AM233803 AM233834 AM233839 AY190828 L03679 X65912 X65913 X65914 X65915 Z47219 Z47225 X58402 BC014258 X58401 X58400 X58397 BC089417 BC078670 TSC_hg19_v1_chr14_-_107035221	-27040	-	TSC_hg19_v1_chr14_-_107013478 AK093806 AK097303 AK125632 AK126320 AK129510 AX748317	-48555	-	AB063741 AY393018 AF062170 AY393124 Z47215 AK126281 TSC_hg19_v1_chr14_-_107066261	4133	-	DQ454429 DQ454922 HM116180 EF091913 EF175413 GQ232868 GQ232976 EF583666 EF407827 EF407822 AJ007320 AF308556 AF103132 HM774392 HQ703981 JN110710 JN111102 HM774550 AY393601 AY393649 AY393679 EU099114 EU099216 DQ100711 AB066834 AF174037 AY050706 DQ005304 FJ492918 HM994925 HQ689790 Z80842 DQ524125 DQ535395 HQ378413 DQ100675 HM996225 AB067078 AY866569 AY971062 DQ065681 DQ926239 EF028212 HM994895 HM994932 HM994933 HM994938 HM994946 HM994963 HM994965 HM995218 HM995258 HM995267 HM995314 HM996512 HM996546 AF021955 GU570262 AF062174 AF062225 AF062279 TSC_hg19_v1_chr14_-_107078867	16694	-	AF460776 EF583680 DQ454729 DQ454436 HM995491 DQ454495 DQ454638 DQ454782 DQ523857 DQ454730 DQ454735 DQ454736 DQ454850 DQ454463 DQ454626 DQ454634 DQ454779 AY003758 DQ454909 AY003782 DQ454387 DQ454439 DQ454443 DQ454491 DQ454630 DQ454640 DQ454657 DQ454658 DQ454693 DQ454996 DQ523865 DQ523866 DQ523904 DQ523907 GU552723 GU552763 DQ454683 DQ454954 AY003756 AY003861 DQ454803 DQ454883 DQ454908 DQ454931 DQ454981 Z30558 Z30559 Z30575 Z30577 Z30579 Z30673 DQ454894 HM995480 DQ454567 DQ454586 DQ454595 DQ454611 DQ454623 DQ454649 DQ454661 DQ454790 DQ454858 DQ454930 DQ454940 DQ523860 M18514 AY003863 AY003854 DQ454390 DQ454444 DQ454650 DQ454684 DQ454709 DQ454717 DQ454721 DQ454733 DQ454737 DQ454855 DQ454887 DQ454933 DQ454936 DQ454963 DQ454984 DQ454994 DQ523863 DQ454447 DQ454504 DQ454539 DQ454596 DQ454609 DQ454613 DQ454619 DQ454633 DQ454656 DQ454672 DQ454720 DQ454886 DQ454942 DQ454972 DQ454977 HM116187 DQ454605 DQ454646 DQ454702 DQ454703 DQ454851 HM116123 HM116135 HM116139 HM116144 HM116147 HM116154 HM116217 AY003860 DQ454602 DQ454880 DQ454822 DQ454825 EF091925 EF175400 EF175422 EF175440 EF583671 EU667610 EU814956 GQ232848 GQ232850 GQ232880 DQ454435 EU099241 EU099155 EU099196 AY577297 AY393172 DQ523932 DQ524057 EU099215 EU099224 AM183980 AY393168 AY393171 AY393176 AY393177 AY393178 AM279541 AF103075 AF103349 AF103054 AY180386 AF103162 FJ385403 JN110682 JN110887 AF103140 FJ385332 FJ385336 FJ385376 FJ385404 FJ385416 FJ385417 FJ385421 GQ504863 L26904 AF103343 AF103091 EU620035 AF103271 EU146313 U00585 EU620063 DQ926547 AY062314 U00553 U00557 AF103164 AF103228 DQ005270 HM995488 AY671631 HM996467 AJ245067 DQ523945 DQ523951 DQ523954 DQ523969 DQ523970 DQ523977 DQ523979 DQ524002 DQ524011 DQ524015 DQ524019 DQ524040 DQ524042 DQ524043 DQ524052 DQ524055 DQ524072 DQ524087 DQ524090 DQ524092 DQ524099 DQ524100 DQ524104 DQ524108 DQ524110 DQ524124 DQ524133 AM233755 DQ926051 DQ926252 AB067262 AJ300799 AY671719 AY941873 AY944692 AY944703 AY944704 AY944722 DQ005289 DQ005293 DQ005305 EF178085 FJ385391 HM995323 HM995324 HM995327 HM995330 HM995345 HM995347 HM995388 HM995403 HM995478 HM995483 HM995484 HM995485 HM995486 HM995487 HM995498 HM995499 HM995500 HM995502 HM995534 HM995551 HM995556 HM995557 HM995559 HM995560 HM995932 HM995933 HM995957 HM995994 HM996010 HM996122 HM996155 HM996464 HM996496 AB063721 AB063723 AB063729 AB063744 AB063787 AB063920 AB066903 AB066912 AB066913 AB067270 AB067272 AB067275 AB067296 AF021963 AF035041 AF062230 AF174018 AF174072 AF174080 AF174097 AF174119 AJ006351 AJ239343 AJ244983 AJ245027 AJ413991 AJ413998 AJ413999 AJ574780 AM279612 AY345917 AY640510 AY670733 AY670744 AY670820 AY670910 AY670915 AY670930 AY670942 AY670967 AY670984 AY671004 AY671056 AY671062 AY671072 AY671075 AY671076 AY671082 AY671085 AY671088 AY671194 AY671221 AY671255 AY671326 AY671337 AY671343 AY671346 AY671353 AY671356 AY671359 AY671373 AY671376 AY671378 AY671394 AY671456 AY671457 AY671458 AY671459 AY671460 AY671463 AY671467 AY671470 AY671472 AY671473 AY671476 AY671485 AY671488 AY671493 AY671494 AY671575 AY671588 AY671589 AY671601 AY671606 AY671628 AY671645 AY671666 AY671667 AY671674 AY671692 AY671710 AY671715 AY671717 AY671759 AY866865 AY986386 AY986387 AY986388 AY986389 AY986390 DQ005263 DQ005287 DQ005288 DQ100795 DQ328873 DQ431484 DQ431485 DQ926085 DQ926130 DQ926178 DQ926219 DQ926256 DQ926258 DQ926290 DQ926310 DQ926368 DQ926395 DQ926514 DQ926572 DQ926640 DQ926644 EU794431 FJ385318 FJ456850 GU570380 GU570382 HQ378396 HQ689744 JF806450 L12189 L12197 L23516 L23517 L23563 S73508 U00486 U00493 U31937 U43927 U51549 U95241 U96283 X98749 Z70613 Z70615 Z70628 Z70629 Z70651 Z70652 Z70653 Z70658 Z74672 Z74674 Z74681 Z74682 Z74683 Z74684 Z74685 Z74686 Z74687 Z74688 Z74689 Z74690 DQ926105 AY686879 AY944715 DQ535399 DQ535425 DQ535434 DQ535441 DQ535468 DQ535469 DQ535474 EF177985 EF178038 EF178125 HM996104 HM996425 HM996431 HM996435 Z14199 Z75403 AY392942 AY393076 AY393081 AY393082 Z47242 AY671167 AF062106 AF062108 AF062109 AF062126 AF062129 AF062132 AF062144 AF062166 AF062185 AF062209 AF062228 AF062252 AF062266 AY671032 AY671186 AY671196 AY671241 AY671258 AY671290 AY671296 M88500 S46247 U44791 U86525 X52111 Z11958 Z47349 Z75395 M18518 BC066594 S50735 TSC_hg19_v1_chr14_-_107083721 AK097365 X67906 X69860 X69866 AK097362 BX248300 AK125079	21546	-	BC072419|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC014258|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089417|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC078670|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126281|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC066594|IGH@|3492|immunoglobulin heavy locus##AK097365|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097362|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125079|IGH@|3492|immunoglobulin heavy locus	0.756099	CTCF.p2:4:0.756
chr6	44221353	44221469	reg1021073.p1	6.020	+	BC014485 TSC_hg19_v1_chr6_+_44214855 BC007327 AL136543	-6538	+	TSC_hg19_v1_chr6_+_44214837 BC068474 AK312255 AY359878 BC016753 AK294643 AK297367 D28342 BX649079 BC004928 BC012807 M16660 NM_007355	-6594	+	TSC_hg19_v1_chr6_+_44195011 DQ892133 DQ895327 CU679195	-26383	+	AK307572 AY491520 DQ893314 DQ896628 DQ896632 EU176354 AB106538 TSC_hg19_v1_chr6_-_44225250 AK075456 AB097021 AB097039 AK123749 AK293344 BC024288 AK293251 NM_178148	3754	-	TSC_hg19_v1_chr6_-_44233257 BC011676 BC063609 AK301360	11853	-	AB590964 NM_004556 U91616	12100	-	BC014485|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC007327|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AL136543|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC068474|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK312255|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AY359878|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC016753|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK294643|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK297367|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BX649079|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC004928|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC012807|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##M16660|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##NM_007355|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##DQ892133|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##DQ895327|SLC29A1|2030|solute carrier family 29 (nucleoside transporters), member 1##AK307572|SLC35B2|347734|solute carrier family 35, member B2##AY491520|SLC35B2|347734|solute carrier family 35, member B2##DQ893314|SLC35B2|347734|solute carrier family 35, member B2##DQ896628|SLC35B2|347734|solute carrier family 35, member B2##DQ896632|SLC35B2|347734|solute carrier family 35, member B2##EU176354|SLC35B2|347734|solute carrier family 35, member B2##AB106538|SLC35B2|347734|solute carrier family 35, member B2##AK075456|SLC35B2|347734|solute carrier family 35, member B2##AB097021|SLC35B2|347734|solute carrier family 35, member B2##AB097039|SLC35B2|347734|solute carrier family 35, member B2##AK123749|SLC35B2|347734|solute carrier family 35, member B2##AK293344|SLC35B2|347734|solute carrier family 35, member B2##BC024288|SLC35B2|347734|solute carrier family 35, member B2##AK293251|SLC35B2|347734|solute carrier family 35, member B2##NM_178148|SLC35B2|347734|solute carrier family 35, member B2##BC011676|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##BC063609|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##AK301360|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##NM_004556|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##U91616|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon	0.993232	CTCF.p2:21:0.977
chr10	85961192	85961341	reg1023404.p2	6.019	+	AB593154 TSC_hg19_v1_chr10_+_85954408 AB593155 BC038799 NM_001171971 NM_033100 AB463200 AB053448	-6813	+	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	-27707	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	-29474	-	BX648524 NM_001017924 BC140765 BC144475	24047	-	AB463829 AB031547 NM_015613 DQ426882 DQ426881	40001	-	BX641033 NM_001012720 NM_001012722 NM_002921 U14910 BC011349 BC008094 BC042536 CU675929 DQ892074 DQ895267	43561	+	AB593154|CDHR1|92211|cadherin-related family member 1##AB593155|CDHR1|92211|cadherin-related family member 1##BC038799|CDHR1|92211|cadherin-related family member 1##NM_001171971|CDHR1|92211|cadherin-related family member 1##NM_033100|CDHR1|92211|cadherin-related family member 1##AB053448|CDHR1|92211|cadherin-related family member 1##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##BX648524|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##NM_001017924|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC140765|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC144475|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##AB031547|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##NM_015613|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##BX641033|RGR|5995|retinal G protein coupled receptor##NM_001012720|RGR|5995|retinal G protein coupled receptor##NM_001012722|RGR|5995|retinal G protein coupled receptor##NM_002921|RGR|5995|retinal G protein coupled receptor##U14910|RGR|5995|retinal G protein coupled receptor##BC011349|RGR|5995|retinal G protein coupled receptor##BC008094|RGR|5995|retinal G protein coupled receptor##BC042536|RGR|5995|retinal G protein coupled receptor##DQ892074|RGR|5995|retinal G protein coupled receptor##DQ895267|RGR|5995|retinal G protein coupled receptor	0.988838	CTCF.p2:-12:0.989
chr13	47468489	47468622	reg1006256.p2	6.019	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	-97240	-	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-341048	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-341135	+	AK314132 BX647777 AK302787 NM_000621 NM_001165947	2512	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1106896	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	1143259	+	BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15	0.054904	
chr4	147837580	147837692	reg1001641.p1	6.019	+	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	-277545	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	-394640	-	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	-740769	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	29362	-	NM_001166055 NM_001957 AK315931 TSC_hg19_v1_chr4_+_148402083	564439	+	TSC_hg19_v1_chr4_+_148402117 D90348 S57498 X61950	564487	+	AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29##NM_001166055|EDNRA|1909|endothelin receptor type A##NM_001957|EDNRA|1909|endothelin receptor type A##AK315931|EDNRA|1909|endothelin receptor type A##D90348|EDNRA|1909|endothelin receptor type A##S57498|EDNRA|1909|endothelin receptor type A##X61950|EDNRA|1909|endothelin receptor type A	0.0	
chr6_mann_hap4	2231485	2231621	reg1026162.p1	6.019	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.51578	CTCF.p2:-11:0.516
chr9	117145401	117145556	reg1023362.p2	6.019	+	BC042202 TSC_hg19_v1_chr9_-_117111294	-34189	-	NM_000608 AK312226 BC015964 BC056239 AK303760 CR456930 CU677539	-53352	+	NM_000607 X02544 AK316207 AK312035 BC026238 BC007032 BC104818 BC104820 BC143313 BC143314 M13692 AB463987 BT019790 CU693168	-60121	+	AY703041 AY703042 AK131082 AK160382 TSC_hg19_v1_chr9_-_117150263 AB075848	4812	-	AY703040 BC055285 NM_030767	11206	-	AY703039 AK126136 TSC_hg19_v1_chr9_-_117160753	15273	-	BC042202|AKNA|80709|AT-hook transcription factor##NM_000608|ORM2|5005|orosomucoid 2##AK312226|ORM2|5005|orosomucoid 2##BC015964|ORM2|5005|orosomucoid 2##BC056239|ORM2|5005|orosomucoid 2##AK303760|ORM2|5005|orosomucoid 2##CR456930|ORM2|5005|orosomucoid 2##NM_000607|ORM1|5004|orosomucoid 1##X02544|ORM1|5004|orosomucoid 1##AK316207|ORM1|5004|orosomucoid 1##AK312035|ORM1|5004|orosomucoid 1##BC026238|ORM1|5004|orosomucoid 1##BC007032|ORM1|5004|orosomucoid 1##BC104818|ORM1|5004|orosomucoid 1##BC104820|ORM1|5004|orosomucoid 1##BC143313|ORM1|5004|orosomucoid 1##BC143314|ORM1|5004|orosomucoid 1##M13692|ORM1|5004|orosomucoid 1##BT019790|ORM1|5004|orosomucoid 1##AY703041|AKNA|80709|AT-hook transcription factor##AY703042|AKNA|80709|AT-hook transcription factor##AK131082|AKNA|80709|AT-hook transcription factor##AK160382|AKNA|80709|AT-hook transcription factor##AB075848|AKNA|80709|AT-hook transcription factor##AY703040|AKNA|80709|AT-hook transcription factor##BC055285|AKNA|80709|AT-hook transcription factor##NM_030767|AKNA|80709|AT-hook transcription factor##AY703039|AKNA|80709|AT-hook transcription factor##AK126136|AKNA|80709|AT-hook transcription factor	0.0	
chr16	21289606	21289737	reg1022184.p1	6.018	+	BC018061 AK290852 TSC_hg19_v1_chr16_-_21289660	-23	-	CU676152 DQ892377 DQ895591 AK310424 U85772 L02950 TSC_hg19_v1_chr16_-_21289612 BC008398	-78	-	AK096138 NM_145865 TSC_hg19_v1_chr16_+_21245019 BC111784 BC112368	-44651	+	BX648477 NM_001014444 NM_001888	24716	-	BC036263 NM_130464	146986	-	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	242081	-	BC018061|CRYM|1428|crystallin, mu##AK290852|CRYM|1428|crystallin, mu##DQ892377|CRYM|1428|crystallin, mu##DQ895591|CRYM|1428|crystallin, mu##AK310424|CRYM|1428|crystallin, mu##U85772|CRYM|1428|crystallin, mu##L02950|CRYM|1428|crystallin, mu##BC008398|CRYM|1428|crystallin, mu##AK096138|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##NM_145865|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##BC111784|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##BC112368|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##BX648477|CRYM|1428|crystallin, mu##NM_001014444|CRYM|1428|crystallin, mu##NM_001888|CRYM|1428|crystallin, mu##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2	0.445217	CTCF.p2:0:0.445
chr18	31341446	31341559	reg1023197.p1	6.018	+	AB051500 TSC_hg19_v1_chr18_+_31319257	-22296	+	NM_030632 AK131454	-182943	+	BX648108 TSC_hg19_v1_chr18_-_31158297	-183273	-	AK296539 NM_001198549	287064	-	NM_001198547	460931	-	AK297185 BC000313 TSC_hg19_v1_chr18_-_31803319	461741	-	AB051500|ASXL3|80816|additional sex combs like 3 (Drosophila)##NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)##AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)##AK296539|NOL4|8715|nucleolar protein 4##NM_001198549|NOL4|8715|nucleolar protein 4##NM_001198547|NOL4|8715|nucleolar protein 4##AK297185|NOL4|8715|nucleolar protein 4##BC000313|NOL4|8715|nucleolar protein 4	0.981181	CTCF.p2:9:0.981
chr20	48795874	48795974	reg1021374.p1	6.018	+	TSC_hg19_v1_chr20_-_48770302 BC144612 NM_001162505 NM_199129 NM_199203	-25606	-	TSC_hg19_v1_chr20_-_48770261 AK023028 AF155120	-25648	-	TSC_hg19_v1_chr20_-_48770251 AB044550 BC018893 BC142966	-25685	-	NM_005194 TSC_hg19_v1_chr20_+_48807197	11269	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	11457	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	11706	+	BC144612|TMEM189|387521|transmembrane protein 189##NM_001162505|TMEM189|387521|transmembrane protein 189##NM_199129|TMEM189|387521|transmembrane protein 189##NM_199203|TMEM189-UBE2V1|387522|TMEM189-UBE2V1 readthrough##AK023028|TMEM189|387521|transmembrane protein 189##AF155120|TMEM189|387521|transmembrane protein 189##AB044550|TMEM189|387521|transmembrane protein 189##BC018893|TMEM189|387521|transmembrane protein 189##BC142966|TMEM189|387521|transmembrane protein 189##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta	0.997545	CTCF.p2:16:0.998
chr20	62245701	62245811	reg1023875.p1	6.018	+	TSC_hg19_v1_chr20_-_62205593 AB232667 BC035130 AK023724 NM_001037335	-40168	-	AB051556 BC150283 NM_033405	-46650	-	BC000912 NM_024059	-61384	+	AB033095 TSC_hg19_v1_chr20_-_62258409 BC036305 NM_012384	12619	-	TSC_hg19_v1_chr20_-_62258426 AK298927	12681	-	DQ893121 DQ896397 BC047671 BC021084 BC032527 AF069709 BC056873 TSC_hg19_v1_chr20_-_62284781 AK074860 NM_015894 AK310010 BC009381 BC025234	39004	-	AB232667|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC035130|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##AK023724|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##NM_001037335|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##AB051556|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC150283|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##NM_033405|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC000912|C20orf195|79025|chromosome 20 open reading frame 195##NM_024059|C20orf195|79025|chromosome 20 open reading frame 195##AB033095|GMEB2|26205|glucocorticoid modulatory element binding protein 2##BC036305|GMEB2|26205|glucocorticoid modulatory element binding protein 2##NM_012384|GMEB2|26205|glucocorticoid modulatory element binding protein 2##AK298927|GMEB2|26205|glucocorticoid modulatory element binding protein 2##DQ893121|STMN3|50861|stathmin-like 3##DQ896397|STMN3|50861|stathmin-like 3##BC047671|STMN3|50861|stathmin-like 3##BC032527|STMN3|50861|stathmin-like 3##AF069709|STMN3|50861|stathmin-like 3##BC056873|STMN3|50861|stathmin-like 3##AK074860|STMN3|50861|stathmin-like 3##NM_015894|STMN3|50861|stathmin-like 3##AK310010|STMN3|50861|stathmin-like 3##BC009381|STMN3|50861|stathmin-like 3##BC025234|STMN3|50861|stathmin-like 3	0.830069	CTCF.p2:-7:0.830
chr3	58980601	58980709	reg1022781.p1	6.018	+	BC015359 TSC_hg19_v1_chr3_-_58652501 AK127546 NM_138805 AY358677	-328134	-	AF035283 NM_001076778 NM_007177	-417165	-	AB023811 TSC_hg19_v1_chr3_-_58563116 BC010561 AL050264 AK055443 AK128791 BC093012	-417546	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	55053	-	BC075863 TSC_hg19_v1_chr3_-_59035746	55086	-	BC050317 TSC_hg19_v1_chr3_-_59035759	55105	-	BC015359|FAM3D|131177|family with sequence similarity 3, member D##AK127546|FAM3D|131177|family with sequence similarity 3, member D##NM_138805|FAM3D|131177|family with sequence similarity 3, member D##AY358677|FAM3D|131177|family with sequence similarity 3, member D##AF035283|FAM107A|11170|family with sequence similarity 107, member A##NM_001076778|FAM107A|11170|family with sequence similarity 107, member A##NM_007177|FAM107A|11170|family with sequence similarity 107, member A##AB023811|FAM107A|11170|family with sequence similarity 107, member A##BC010561|FAM107A|11170|family with sequence similarity 107, member A##AL050264|FAM107A|11170|family with sequence similarity 107, member A##AK055443|FAM107A|11170|family with sequence similarity 107, member A##AK128791|FAM107A|11170|family with sequence similarity 107, member A##BC093012|FAM107A|11170|family with sequence similarity 107, member A##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##BC050317|C3orf67|200844|chromosome 3 open reading frame 67	0.363301	CTCF.p2:3:0.363
chr9	41704549	41704643	reg1022083.p1	6.018	+	BC040528 NM_001113541 NM_015667	-203918	+	BC040528 NM_001113541 NM_015667 NM_001242613	-377217	-	AK057375 AK292150 NM_033160	-912510	-	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	250318	-	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	663762	+	NM_001099279 NM_199244	1012637	+	BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##AK057375|ZNF658|26149|zinc finger protein 658##AK292150|ZNF658|26149|zinc finger protein 658##NM_033160|ZNF658|26149|zinc finger protein 658##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.397076	CTCF.p2:-11:0.397
chr14	100906659	100906787	reg1027455.p1	6.017	+	TSC_hg19_v1_chr14_+_100842812 NM_001161476 BX248767 AK291960 NM_024515 BC067872 AY295082	-63885	+	TSC_hg19_v1_chr14_-_100842681 NM_173701 NM_213645	-64043	-	TSC_hg19_v1_chr14_-_100842665 AK291141	-64070	-	AB527893 CU678064 EU832622 EU832695 NM_001159531	127610	-	BC002607 NM_020836	129407	-	TSC_hg19_v1_chr14_+_101193228 NM_003836 AK289384 AK297918 AK313258 BC007741 BC014015	286500	+	NM_001161476|WDR25|79446|WD repeat domain 25##BX248767|WDR25|79446|WD repeat domain 25##AK291960|WDR25|79446|WD repeat domain 25##NM_024515|WDR25|79446|WD repeat domain 25##BC067872|WDR25|79446|WD repeat domain 25##AY295082|WDR25|79446|WD repeat domain 25##NM_173701|WARS|7453|tryptophanyl-tRNA synthetase##NM_213645|WARS|7453|tryptophanyl-tRNA synthetase##AK291141|WARS|7453|tryptophanyl-tRNA synthetase##EU832622|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832695|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001159531|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##BC002607|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_020836|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_003836|DLK1|8788|delta-like 1 homolog (Drosophila)##AK289384|DLK1|8788|delta-like 1 homolog (Drosophila)##AK297918|DLK1|8788|delta-like 1 homolog (Drosophila)##AK313258|DLK1|8788|delta-like 1 homolog (Drosophila)##BC007741|DLK1|8788|delta-like 1 homolog (Drosophila)##BC014015|DLK1|8788|delta-like 1 homolog (Drosophila)	0.0	
chr14	22669037	22669155	reg1027121.p1	6.017	+	AB463964 NM_001001912 AY726598	-535774	+	NM_001005466 AB529274 BC137371 BC137382	-566050	-	AB528817 NM_001005465	-630222	-	X58763 TSC_hg19_v1_chr14_+_22989364	320253	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	388990	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	389038	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.617896	CTCF.p2:-1:0.585
chr16	87350523	87350658	reg1024370.p1	6.017	+	BC100027 NM_005250	-738476	+	BC113437 BC113439 NM_005251	-749734	+	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	-761818	-	TSC_hg19_v1_chr16_-_87350760 AB528835 AM392822 AM393070	210	-	TSC_hg19_v1_chr16_-_87350999 BC015536 AK026130 NM_001195124 NM_001195125	396	-	TSC_hg19_v1_chr16_-_87417364 AY736035 AF428140 BC012748 BC002985 NM_024735	66772	-	BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AM392822|C16orf95|100506581|chromosome 16 open reading frame 95##AM393070|C16orf95|100506581|chromosome 16 open reading frame 95##BC015536|C16orf95|100506581|chromosome 16 open reading frame 95##AK026130|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195124|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195125|C16orf95|100506581|chromosome 16 open reading frame 95##AY736035|FBXO31|79791|F-box protein 31##AF428140|FBXO31|79791|F-box protein 31##BC012748|FBXO31|79791|F-box protein 31##BC002985|FBXO31|79791|F-box protein 31##NM_024735|FBXO31|79791|F-box protein 31	0.16177	
chr3	170217495	170217601	reg1023621.p2	6.017	+	AK098766 NM_001185056 AK294087	-78507	+	NM_005602 TSC_hg19_v1_chr3_+_170136652 AK294108 AK312923 BC013577	-80890	+	NM_001145097 NM_001248008 U70730 X15217 X15219	-140138	+	TSC_hg19_v1_chr3_-_170303774 AK122655 NM_020949	86270	-	TSC_hg19_v1_chr3_-_170587985 BC107708 AL110170 BC062731 NM_001099645	370447	-	TSC_hg19_v1_chr3_-_170626397 AK311962 BC036072	408843	-	NM_001185056|CLDN11|5010|claudin 11##AK294087|CLDN11|5010|claudin 11##NM_005602|CLDN11|5010|claudin 11##AK312923|CLDN11|5010|claudin 11##BC013577|CLDN11|5010|claudin 11##NM_001145097|SKIL|6498|SKI-like oncogene##NM_001248008|SKIL|6498|SKI-like oncogene##U70730|SKIL|6498|SKI-like oncogene##X15217|SKIL|6498|SKI-like oncogene##X15219|SKIL|6498|SKI-like oncogene##AK122655|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_020949|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##BC107708|RPL22L1|200916|ribosomal protein L22-like 1##AL110170|RPL22L1|200916|ribosomal protein L22-like 1##BC062731|RPL22L1|200916|ribosomal protein L22-like 1##NM_001099645|RPL22L1|200916|ribosomal protein L22-like 1##AK311962|EIF5A2|56648|eukaryotic translation initiation factor 5A2##BC036072|EIF5A2|56648|eukaryotic translation initiation factor 5A2	0.0	
chr5	45774813	45774944	reg1021780.p1	6.017	+	AF488549 NM_021072	-78659	-	AF064876 TSC_hg19_v1_chr5_-_45695947	-78987	-	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	-965851	+	AK300860 TSC_hg19_v1_chr5_-_49737200 BC059398	3962321	-	TSC_hg19_v1_chr5_-_49737229 NM_198449	3962365	-	AK298680 AK314466 BC105789 NM_001178055	4186854	+	AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AK300860|EMB|133418|embigin##BC059398|EMB|133418|embigin##NM_198449|EMB|133418|embigin##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	0.055173	
chr17	40833357	40833466	reg1021097.p1	6.016	+	TSC_hg19_v1_chr17_-_40829013 BC016062 AK024672 AB208939 BC052978 NM_024927	-4598	-	TSC_hg19_v1_chr17_-_40828093 AK096767	-5319	-	TSC_hg19_v1_chr17_+_40811298 NM_016437 BC108739 AK225134 BC051890 BC052283 AK022324 BC009670 CU679431 AB464326	-22020	+	AF208237 AY429103 EU832758 GQ129298 AF215981 BC098132 BC098157 BC098304 BC099840 NM_016602	431	-	TSC_hg19_v1_chr17_+_40834578 NM_003632 U87223 BC171797 AB384696	1297	+	TSC_hg19_v1_chr17_-_40897056 BC015882 AK299887 AK295853 AK304835 AK309121 AK310399 AK311237 AL833159 AK295626 NM_001991	63667	-	BC016062|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AK024672|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AB208939|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##BC052978|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##NM_024927|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AK096767|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##NM_016437|TUBG2|27175|tubulin, gamma 2##BC108739|TUBG2|27175|tubulin, gamma 2##AK225134|TUBG2|27175|tubulin, gamma 2##BC051890|TUBG2|27175|tubulin, gamma 2##BC052283|TUBG2|27175|tubulin, gamma 2##AK022324|TUBG2|27175|tubulin, gamma 2##BC009670|TUBG2|27175|tubulin, gamma 2##AF208237|CCR10|2826|chemokine (C-C motif) receptor 10##AY429103|CCR10|2826|chemokine (C-C motif) receptor 10##EU832758|CCR10|2826|chemokine (C-C motif) receptor 10##GQ129298|CCR10|2826|chemokine (C-C motif) receptor 10##AF215981|CCR10|2826|chemokine (C-C motif) receptor 10##BC098132|CCR10|2826|chemokine (C-C motif) receptor 10##BC098157|CCR10|2826|chemokine (C-C motif) receptor 10##BC098304|CCR10|2826|chemokine (C-C motif) receptor 10##BC099840|CCR10|2826|chemokine (C-C motif) receptor 10##NM_016602|CCR10|2826|chemokine (C-C motif) receptor 10##NM_003632|CNTNAP1|8506|contactin associated protein 1##U87223|CNTNAP1|8506|contactin associated protein 1##BC171797|CNTNAP1|8506|contactin associated protein 1##BC015882|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK299887|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK295853|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK304835|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK309121|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK310399|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK311237|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AL833159|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK295626|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##NM_001991|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)	0.966161	CTCF.p2:-22:0.966
chr4	90359453	90359601	reg1023962.p1	6.016	+	TSC_hg19_v1_chr4_-_90229171 NM_198281	-130370	-	AK124616 TSC_hg19_v1_chr4_-_90228950	-130576	-	AK027653 NM_145715	-325560	+	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	398715	-	NM_001146055	399919	-	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	456535	+	NM_198281|GPRIN3|285513|GPRIN family member 3##AK124616|GPRIN3|285513|GPRIN family member 3##AK027653|TIGD2|166815|tigger transposable element derived 2##NM_145715|TIGD2|166815|tigger transposable element derived 2##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_001146055|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1	0.9938	CTCF.p2:11:0.994
chr7	35764920	35765052	reg1017779.p1	6.016	+	TSC_hg19_v1_chr7_-_35734795 NM_022373	-30208	-	BC020264 TSC_hg19_v1_chr7_-_35734751 AK055708	-30247	-	TSC_hg19_v1_chr7_-_35734533 BC005091	-30390	-	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	75724	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	75847	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	75866	+	NM_022373|HERPUD2|64224|HERPUD family member 2##BC020264|HERPUD2|64224|HERPUD family member 2##AK055708|HERPUD2|64224|HERPUD family member 2##BC005091|HERPUD2|64224|HERPUD family member 2##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7	0.0	
chr10	3977375	3977535	reg1019566.p1	6.015	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-149946	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-150144	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-762450	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	890963	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1028059	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1028168	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr13	44362274	44362396	reg1024281.p1	6.015	+	TSC_hg19_v1_chr13_-_44361107 BC068521 NM_001242863 NM_017993	-1252	-	BC024178 NM_001127615	-158725	-	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	-764633	+	NM_001128303	91084	+	NM_144974 AK056408	91490	-	AK096044 NM_153218 TSC_hg19_v1_chr13_+_44453986 BC035749	91671	+	BC068521|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001242863|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_017993|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC024178|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001127615|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122##AK096044|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_153218|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC035749|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1	0.732027	CTCF.p2:28:0.732
chr6	118902116	118902218	reg1020926.p2	6.015	+	NM_002667 M63603 AK311799 BC005269	-32702	+	BC028615 NM_001029858 BC114925	-673477	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-905501	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	70869	-	BC110835 BC064835 NM_001178035	129066	-	NM_014034 AK025738 AL050261 BC010878 AB028628 AF279306 CU679835 CR457347	313241	+	NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like##NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	0.99263	CTCF.p2:13:0.993
chr12	127778167	127778291	reg1022136.p1	6.014	+	NM_052907	-1967068	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-2228161	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-2228288	+	NM_001136103	973718	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	1530214	-	BC043528 TSC_hg19_v1_chr12_+_129337985	1559755	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.905891	CTCF.p2:29:0.906
chr5	131512834	131512938	reg1021541.p2	6.014	+	M11220 NM_000758 BC113924 BC113999 BC108724 M11734 M10663 AY720441 AB591004 AF510855	-103361	+	M20137 NM_000588 BC069472 BC066272 BC066273 BC066274 BC066275 BC066276 M17115 M14743 CU686832 HQ448457	-116514	+	AK314452 BC047453 NM_001205248 NM_001205251 BC026161 NM_001205250 DQ655980	-165193	-	NM_001017973 NM_004199 BC017062	50057	-	TSC_hg19_v1_chr5_-_131563545 AY358970 BC025960 BC035813 BX647924 NM_001017974 NM_001142598 NM_001142599	50632	-	TSC_hg19_v1_chr5_+_131593340 BC016765 NM_001131027 NM_003687 AF154335	80467	+	M11220|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_000758|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113924|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113999|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC108724|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M11734|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M10663|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AY720441|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AF510855|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M20137|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##NM_000588|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC069472|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066272|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066273|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066274|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066275|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066276|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M17115|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M14743|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##HQ448457|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##AK314452|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC047453|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205248|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205251|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC026161|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205250|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##DQ655980|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001017973|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_004199|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC017062|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##AY358970|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC025960|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC035813|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BX647924|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001017974|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142598|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142599|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC016765|PDLIM4|8572|PDZ and LIM domain 4##NM_001131027|PDLIM4|8572|PDZ and LIM domain 4##NM_003687|PDLIM4|8572|PDZ and LIM domain 4##AF154335|PDLIM4|8572|PDZ and LIM domain 4	0.0	
chr5	137688194	137688311	reg1022350.p2	6.014	+	TSC_hg19_v1_chr5_+_137673956 BC000259 AF251040	-14269	+	TSC_hg19_v1_chr5_+_137673954 AK026729 AK027412 AK310378 AK315567	-14298	+	TSC_hg19_v1_chr5_+_137673789 NM_016605	-14494	+	TSC_hg19_v1_chr5_+_137688270 AF338242 NM_016604	28	+	TSC_hg19_v1_chr5_+_137688386 BC146788 AB029005 AB527166	183	+	TSC_hg19_v1_chr5_+_137774760 AK056193 AK291101 AK223611 BC006218 NM_016606 AK293480 AK290547	86476	+	BC000259|FAM53C|51307|family with sequence similarity 53, member C##AF251040|FAM53C|51307|family with sequence similarity 53, member C##AK027412|FAM53C|51307|family with sequence similarity 53, member C##AK310378|FAM53C|51307|family with sequence similarity 53, member C##AK315567|FAM53C|51307|family with sequence similarity 53, member C##NM_016605|FAM53C|51307|family with sequence similarity 53, member C##AF338242|KDM3B|51780|lysine (K)-specific demethylase 3B##NM_016604|KDM3B|51780|lysine (K)-specific demethylase 3B##BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B##AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B##AK056193|REEP2|51308|receptor accessory protein 2##AK291101|REEP2|51308|receptor accessory protein 2##AK223611|REEP2|51308|receptor accessory protein 2##BC006218|REEP2|51308|receptor accessory protein 2##NM_016606|REEP2|51308|receptor accessory protein 2##AK293480|REEP2|51308|receptor accessory protein 2##AK290547|REEP2|51308|receptor accessory protein 2	0.287153	CTCF.p2:-56:0.287
chr11	12915732	12915842	reg1023093.p1	6.013	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	-219824	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	-516678	+	AK123671 NM_032867	-607341	+	TSC_hg19_v1_chr11_+_12960793 AK075236	45024	+	TSC_hg19_v1_chr11_+_13030883 NM_001080521	115137	+	TSC_hg19_v1_chr11_+_13299288 NM_001030272 NM_001030273 NM_001178	383505	+	NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha##AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_001080521|RASSF10|644943|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10##NM_001030272|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001030273|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001178|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like	0.925566	CTCF.p2:17:0.926
chr13	41548953	41549075	reg1023730.p1	6.013	+	TSC_hg19_v1_chr13_-_41495877 AK096993 BC047078 BC020814	-53149	-	AF177333 TSC_hg19_v1_chr13_+_41363756	-185248	+	TSC_hg19_v1_chr13_+_41363716 AK313602 AK296862 AF112968	-185330	+	DQ891709 DQ894886 AB385566 CU688886 TSC_hg19_v1_chr13_-_41556203	7182	-	AK304289 BC010575 BC030507 NM_001145353	7374	-	TSC_hg19_v1_chr13_-_41593453 M82882	44429	-	AK096993|LOC100616668|100616668|TPTE2 pseudogene##BC047078|LOC100616668|100616668|TPTE2 pseudogene##BC020814|SUGT1P3|283507|suppressor of G2 allele of SKP1 (S. cerevisiae) pseudogene 3##AF177333|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK313602|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK296862|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AF112968|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##DQ891709|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##DQ894886|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##AK304289|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##BC010575|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##BC030507|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##NM_001145353|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##M82882|ELF1|1997|E74-like factor 1 (ets domain transcription factor)	0.034199	
chr4	1209213	1209384	reg1019863.p1	6.013	+	CR627052 NM_001199021	-6549	-	BC104228 BC104229 BC112991 BC112992 BC044945 AK091779 AX747178 TSC_hg19_v1_chr4_-_1195337	-14056	-	TSC_hg19_v1_chr4_-_1166969 NM_001128325	-42320	-	AB527760 DQ891918 DQ895102 TSC_hg19_v1_chr4_-_1242878 AF091555 BC011655 U37408	33512	-	TSC_hg19_v1_chr4_-_1242910 BC072021 BC053320 NM_001012614 NM_001328 BC098400	33610	-	TSC_hg19_v1_chr4_+_1243060 AK125775 AK056133	33870	+	CR627052|LOC100130872|100130872|uncharacterized LOC100130872##NM_001199021|SPON2|10417|spondin 2, extracellular matrix protein##BC104228|LOC100130872|100130872|uncharacterized LOC100130872##BC104229|LOC100130872|100130872|uncharacterized LOC100130872##BC112991|LOC100130872|100130872|uncharacterized LOC100130872##BC112992|LOC100130872|100130872|uncharacterized LOC100130872##BC044945|LOC100130872|100130872|uncharacterized LOC100130872##AK091779|LOC100130872|100130872|uncharacterized LOC100130872##NM_001128325|SPON2|10417|spondin 2, extracellular matrix protein##DQ891918|CTBP1|1487|C-terminal binding protein 1##DQ895102|CTBP1|1487|C-terminal binding protein 1##AF091555|CTBP1|1487|C-terminal binding protein 1##BC011655|CTBP1|1487|C-terminal binding protein 1##U37408|CTBP1|1487|C-terminal binding protein 1##BC072021|CTBP1|1487|C-terminal binding protein 1##BC053320|CTBP1|1487|C-terminal binding protein 1##NM_001012614|CTBP1|1487|C-terminal binding protein 1##NM_001328|CTBP1|1487|C-terminal binding protein 1##BC098400|CTBP1|1487|C-terminal binding protein 1##AK125775|C4orf42|92070|chromosome 4 open reading frame 42##AK056133|C4orf42|92070|chromosome 4 open reading frame 42	0.147165	
chr1	207793789	207793891	reg1021311.p1	6.012	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	-124262	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-166179	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-298735	+	NM_175710 BC109190 BC109191	24647	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	131553	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	131643	+	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein	0.546374	CTCF.p2:13:0.546
chr1	214505325	214505436	reg1017401.p1	6.012	+	TSC_hg19_v1_chr1_+_214454550 BC068511 BC049367 BC094747 BC057793 NM_020197 AF226053 BC098133 BC098276 BC098305 BC098335 BC028104 AK313868 AB590916 BC039890	-50943	+	BC024201 NM_002763	-343521	+	AK298182 TSC_hg19_v1_chr1_+_214161296 U44060	-344091	+	X82676 TSC_hg19_v1_chr1_-_214724620 BC017300 AK090596	219227	-	TSC_hg19_v1_chr1_-_214724946 AK298120 BX538306 AK291641	219519	-	TSC_hg19_v1_chr1_-_214724977 NM_005401	219618	-	BC068511|SMYD2|56950|SET and MYND domain containing 2##BC049367|SMYD2|56950|SET and MYND domain containing 2##BC094747|SMYD2|56950|SET and MYND domain containing 2##BC057793|SMYD2|56950|SET and MYND domain containing 2##NM_020197|SMYD2|56950|SET and MYND domain containing 2##AF226053|SMYD2|56950|SET and MYND domain containing 2##BC098133|SMYD2|56950|SET and MYND domain containing 2##BC098276|SMYD2|56950|SET and MYND domain containing 2##BC098305|SMYD2|56950|SET and MYND domain containing 2##BC098335|SMYD2|56950|SET and MYND domain containing 2##BC028104|SMYD2|56950|SET and MYND domain containing 2##AK313868|SMYD2|56950|SET and MYND domain containing 2##BC039890|SMYD2|56950|SET and MYND domain containing 2##BC024201|PROX1|5629|prospero homeobox 1##NM_002763|PROX1|5629|prospero homeobox 1##AK298182|PROX1|5629|prospero homeobox 1##U44060|PROX1|5629|prospero homeobox 1##X82676|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##BC017300|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK090596|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK298120|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##AK291641|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##NM_005401|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14	0.292281	CTCF.p2:-15:0.292
chr18	61662144	61662290	reg1026014.p1	6.012	+	NM_001031848 NM_002640 NM_198833 AK300391 L40377 TSC_hg19_v1_chr18_+_61637345 BC034528 U92984 BX571754 AK313782	-24904	+	NM_001123366	-45630	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	-79473	+	AJ007611 NM_033646	1755270	+	TSC_hg19_v1_chr18_+_63417845 BC036786	1755649	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	1755985	+	NM_001031848|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_002640|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_198833|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK300391|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##L40377|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BC034528|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##U92984|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BX571754|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK313782|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2	0.998733	CTCF.p2:2:0.999
chr4	83773561	83773672	reg1024877.p1	6.012	+	TSC_hg19_v1_chr4_-_83719926 BC004936 BC137429 BC137432 AF389338 AK024685 NM_001037582 NM_024906	-53627	-	AK301116 BC147019 BC147027 NM_001080506 AK297512	-290502	-	TSC_hg19_v1_chr4_+_83351969 AB528563 CR457141	-421647	+	TSC_hg19_v1_chr4_-_83812296 BC084583 AB018358 AB018359 BC031292 AK225934 BC143489 BC117221 BC143491 BC143492	38669	-	AK002161 CR933696 TSC_hg19_v1_chr4_-_83812319	38696	-	TSC_hg19_v1_chr4_-_83812330 AK295810	38712	-	BC004936|SCD5|79966|stearoyl-CoA desaturase 5##BC137429|SCD5|79966|stearoyl-CoA desaturase 5##BC137432|SCD5|79966|stearoyl-CoA desaturase 5##AF389338|SCD5|79966|stearoyl-CoA desaturase 5##AK024685|SCD5|79966|stearoyl-CoA desaturase 5##NM_001037582|SCD5|79966|stearoyl-CoA desaturase 5##NM_024906|SCD5|79966|stearoyl-CoA desaturase 5##AK301116|TMEM150C|441027|transmembrane protein 150C##BC147019|TMEM150C|441027|transmembrane protein 150C##BC147027|TMEM150C|441027|transmembrane protein 150C##NM_001080506|TMEM150C|441027|transmembrane protein 150C##AK297512|TMEM150C|441027|transmembrane protein 150C##CR457141|ENOPH1|58478|enolase-phosphatase 1##BC084583|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AB018358|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AB018359|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC031292|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK225934|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143489|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC117221|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143491|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143492|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK002161|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##CR933696|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK295810|SEC31A|22872|SEC31 homolog A (S. cerevisiae)	0.054611	
chr6_qbl_hap6	2628280	2628375	reg1018369.p1	6.012	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.012206	CTCF.p2:31:1.000
chrX	77851503	77851627	reg1018731.p1	6.012	+	BC035750 DQ131801 DQ131800 AK023929 DQ131802 NM_006639 AK313643 DQ131799	-268482	-	AB529179 DQ891928 DQ895115 BC071649 TSC_hg19_v1_chrX_-_77395133 AF220509 BC009566 AK312579 BC010350 BC146952 BC146960 NM_015975	-456422	-	AB062432 TSC_hg19_v1_chrX_+_77359778 BC104837 BC113568 BC023234 AY423725 AB385546 CR456716 HQ258236	-491763	+	AK096184 NM_152694	63259	-	NM_005296 AK314134	151643	+	NM_014499 NM_198333 AK313218 AK292138 BC051875	349307	+	BC035750|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131801|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131800|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK023929|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131802|CYSLTR1|10800|cysteinyl leukotriene receptor 1##NM_006639|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK313643|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131799|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ891928|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##DQ895115|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC071649|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AF220509|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC009566|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AK312579|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC010350|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146952|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146960|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##NM_015975|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AB062432|PGK1|5230|phosphoglycerate kinase 1##BC104837|PGK1|5230|phosphoglycerate kinase 1##BC113568|PGK1|5230|phosphoglycerate kinase 1##BC023234|PGK1|5230|phosphoglycerate kinase 1##AY423725|PGK1|5230|phosphoglycerate kinase 1##CR456716|PGK1|5230|phosphoglycerate kinase 1##HQ258236|PGK1|5230|phosphoglycerate kinase 1##AK096184|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_152694|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	0.012916	
chr20	50859273	50859393	reg1020604.p1	6.011	+	BC012759 BC041622 NM_018197 NM_022088 NM_199426 NM_199427	-50810	-	BT009760 AB527686 BC021087 AK001744 TSC_hg19_v1_chr20_-_50808313 AK090547 BC031524 AK001596 AK222712	-51078	-	AY170621 AY170622 AY172738 BC111714 AK001666 NM_020436	-440337	-	BX640770 NM_173485	729612	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	730445	+	AK302570 NM_001193421	942488	+	BC012759|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC041622|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_018197|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_022088|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199426|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199427|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BT009760|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC021087|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001744|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK090547|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC031524|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001596|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK222712|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AY170621|SALL4|57167|sal-like 4 (Drosophila)##AY170622|SALL4|57167|sal-like 4 (Drosophila)##AY172738|SALL4|57167|sal-like 4 (Drosophila)##BC111714|SALL4|57167|sal-like 4 (Drosophila)##AK001666|SALL4|57167|sal-like 4 (Drosophila)##NM_020436|SALL4|57167|sal-like 4 (Drosophila)##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2##AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2	0.997806	CTCF.p2:27:0.998
chr2	82250975	82251073	reg1025093.p1	6.011	+	TSC_hg19_v1_chr2_-_80531838 AK225779	-1719181	-	TSC_hg19_v1_chr2_-_80531719 AK290512	-1719299	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	-1719499	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	2435346	-	AK296741 TSC_hg19_v1_chr2_-_84686396	2435371	-	NM_003849	2435561	-	AK225779|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit	0.504574	CTCF.p2:0:0.368
chr4	119145518	119145627	reg1024041.p1	6.011	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	-189997	+	TSC_hg19_v1_chr4_+_118954764 AY358852	-190801	+	AK074617 BC030831 NM_152402	-1138839	-	TSC_hg19_v1_chr4_+_119199912 BC017993 BC039555	54345	+	TSC_hg19_v1_chr4_-_119273910 AJ001531 BC007761 NM_003619	128353	-	TSC_hg19_v1_chr4_+_119512929 AK024248	367362	+	AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC017993|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##BC039555|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##AJ001531|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC007761|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##NM_003619|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##AK024248|LOC729218|729218|uncharacterized LOC729218	0.998101	CTCF.p2:23:0.998
chr10	91898705	91898832	reg1022908.p1	6.010	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-400001	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-437393	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-493444	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	718678	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	718965	-	TSC_hg19_v1_chr10_+_92631241 BC006991	732489	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.382665	CTCF.p2:31:0.383
chr20	42684830	42684934	reg1021395.p1	6.010	+	NM_001098798	-110347	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	-140089	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	-141395	+	AL132999 TSC_hg19_v1_chr20_-_42815818 AK304863	130911	-	BC029957 NM_020433 NM_175913	131335	-	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	154474	-	NM_001098798|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##AL132999|JPH2|57158|junctophilin 2##AK304863|JPH2|57158|junctophilin 2##BC029957|JPH2|57158|junctophilin 2##NM_020433|JPH2|57158|junctophilin 2##NM_175913|JPH2|57158|junctophilin 2##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111	0.102285	
chr8	64029757	64029872	reg1023669.p1	6.010	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-31187	-	NM_003878	-78205	-	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	-78416	-	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	51330	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	51386	+	NM_152414 AK293979	1463044	+	U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_003878|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22	0.486	CTCF.p2:-14:0.486
chrX	46236096	46236230	reg1026992.p1	6.010	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	-1176050	-	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-1503727	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-1532850	+	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	70548	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	168693	-	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	168781	+	BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588	0.0	
chr2	203987383	203987551	reg1024346.p2	6.009	+	TSC_hg19_v1_chr2_+_203879597 AK096293 NM_001114132 BC132950 BC137214 BC144532 BC144533 AB053318	-107843	+	TSC_hg19_v1_chr2_+_203776997 BC021999 AL834188 NM_001104586 AY032876 AK310640 AK308171 AK022737 AK295499 AK299366 AK304014 AK316432 AK295703 AB053310 NM_024744	-210444	+	AK056092 NM_018256	-210519	-	AB209471 TSC_hg19_v1_chr2_+_204055414	67942	+	NM_177538	115696	+	TSC_hg19_v1_chr2_+_204103740 AF183412 AK297082 BC093022 BC033752 BC020616 AL832998 AY359068 AK307931 DQ890918 DQ894068 DQ894069 CU676580	116254	+	NM_001114132|NBEAL1|65065|neurobeachin-like 1##BC132950|NBEAL1|65065|neurobeachin-like 1##BC137214|NBEAL1|65065|neurobeachin-like 1##BC144532|NBEAL1|65065|neurobeachin-like 1##BC144533|NBEAL1|65065|neurobeachin-like 1##AB053318|NBEAL1|65065|neurobeachin-like 1##BC021999|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AL834188|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##NM_001104586|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AY032876|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK310640|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK308171|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK022737|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK295499|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK299366|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK304014|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK316432|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK295703|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AB053310|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##NM_024744|ALS2CR8|79800|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 8##AK056092|WDR12|55759|WD repeat domain 12##NM_018256|WDR12|55759|WD repeat domain 12##AB209471|RPL12|6136|ribosomal protein L12##NM_177538|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AF183412|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK297082|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC093022|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC033752|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC020616|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AL832998|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AY359068|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK307931|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ890918|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ894068|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ894069|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1	0.801023	CTCF.p2:-4:0.801
chr2	9893470	9893650	reg1023433.p2	6.009	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-122435	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	-122511	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	-122947	-	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	90060	+	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	198290	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	290232	+	NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11	0.0	
chr4	19226593	19226730	reg1023564.p1	6.009	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-1203195	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-1414050	+	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	-1414388	-	AB017168 NM_004787 BC117190 BC143978 AF133270	1028675	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	1475406	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	1758968	-	AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16##AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4	0.995739	CTCF.p2:-15:0.996
chr6	4806430	4806540	reg1023226.p2	6.009	+	TSC_hg19_v1_chr6_+_4776889 BC119682	-29564	+	TSC_hg19_v1_chr6_+_4776647 AK291601 BC108725 NM_004824	-29825	+	TSC_hg19_v1_chr6_+_4136242 AK092451	-670212	+	AK296985 NM_001143970	29846	+	BC043397 NM_001143971	83740	+	TSC_hg19_v1_chr6_+_5004043 AK094934	197541	+	BC119682|CDYL|9425|chromodomain protein, Y-like##AK291601|CDYL|9425|chromodomain protein, Y-like##BC108725|CDYL|9425|chromodomain protein, Y-like##NM_004824|CDYL|9425|chromodomain protein, Y-like##AK092451|LOC100507506|100507506|uncharacterized LOC100507506##AK296985|CDYL|9425|chromodomain protein, Y-like##NM_001143970|CDYL|9425|chromodomain protein, Y-like##BC043397|CDYL|9425|chromodomain protein, Y-like##NM_001143971|CDYL|9425|chromodomain protein, Y-like##AK094934|LOC285778|285778|uncharacterized LOC285778	0.904735	CTCF.p2:-7:0.905
chr5	42423469	42423564	reg1020369.p1	6.008	+	AK000840 TSC_hg19_v1_chr5_-_42175357	-248160	-	AK024075 NM_012176 NM_033484 BC048098 AK001003 BC040011 AF129534 AF176703	-498130	+	TSC_hg19_v1_chr5_+_41904459 BC131721 NM_175921 BX648350	-519039	+	TSC_hg19_v1_chr5_+_42423913 NM_000163 X06562	402	+	AF230801 NM_001242399 NM_001242400 AF230800	1049	+	NM_001242401 Z11851	1577	+	AK024075|FBXO4|26272|F-box protein 4##NM_012176|FBXO4|26272|F-box protein 4##NM_033484|FBXO4|26272|F-box protein 4##BC048098|FBXO4|26272|F-box protein 4##AK001003|FBXO4|26272|F-box protein 4##BC040011|FBXO4|26272|F-box protein 4##AF129534|FBXO4|26272|F-box protein 4##AF176703|FBXO4|26272|F-box protein 4##BC131721|C5orf51|285636|chromosome 5 open reading frame 51##NM_175921|C5orf51|285636|chromosome 5 open reading frame 51##BX648350|C5orf51|285636|chromosome 5 open reading frame 51##NM_000163|GHR|2690|growth hormone receptor##X06562|GHR|2690|growth hormone receptor##AF230801|GHR|2690|growth hormone receptor##NM_001242399|GHR|2690|growth hormone receptor##NM_001242400|GHR|2690|growth hormone receptor##AF230800|GHR|2690|growth hormone receptor##NM_001242401|GHR|2690|growth hormone receptor##Z11851|GHR|2690|growth hormone receptor	0.085409	
chr6	4210974	4211081	reg1023559.p1	6.008	+	TSC_hg19_v1_chr6_+_4136242 AK092451	-74754	+	BC034702 NM_001166010 TSC_hg19_v1_chr6_-_4135810 AF244138 AF153612 EU832093 EU832185 AF069301 BC033841 AF257175 BC025287 EU832094 EU832186 BC017474 BC008458 AL136642 BC016781 AK222617 BC002668 AK075108 AK223003 AK297049 AK057175 NM_006117 NM_206836	-75262	-	NM_001085401 BC047663 BC066986	-131583	+	TSC_hg19_v1_chr6_+_4776647 AK291601 BC108725 NM_004824	565633	+	TSC_hg19_v1_chr6_+_4776889 BC119682	565894	+	AK296985 NM_001143970	625304	+	AK092451|LOC100507506|100507506|uncharacterized LOC100507506##BC034702|ECI2|10455|enoyl-CoA delta isomerase 2##NM_001166010|ECI2|10455|enoyl-CoA delta isomerase 2##AF244138|ECI2|10455|enoyl-CoA delta isomerase 2##AF153612|ECI2|10455|enoyl-CoA delta isomerase 2##EU832093|ECI2|10455|enoyl-CoA delta isomerase 2##EU832185|ECI2|10455|enoyl-CoA delta isomerase 2##AF069301|ECI2|10455|enoyl-CoA delta isomerase 2##BC033841|ECI2|10455|enoyl-CoA delta isomerase 2##AF257175|ECI2|10455|enoyl-CoA delta isomerase 2##BC025287|ECI2|10455|enoyl-CoA delta isomerase 2##EU832094|ECI2|10455|enoyl-CoA delta isomerase 2##EU832186|ECI2|10455|enoyl-CoA delta isomerase 2##BC017474|ECI2|10455|enoyl-CoA delta isomerase 2##BC008458|ECI2|10455|enoyl-CoA delta isomerase 2##AL136642|ECI2|10455|enoyl-CoA delta isomerase 2##BC016781|ECI2|10455|enoyl-CoA delta isomerase 2##AK222617|ECI2|10455|enoyl-CoA delta isomerase 2##BC002668|ECI2|10455|enoyl-CoA delta isomerase 2##AK075108|ECI2|10455|enoyl-CoA delta isomerase 2##AK223003|ECI2|10455|enoyl-CoA delta isomerase 2##AK297049|ECI2|10455|enoyl-CoA delta isomerase 2##AK057175|ECI2|10455|enoyl-CoA delta isomerase 2##NM_006117|ECI2|10455|enoyl-CoA delta isomerase 2##NM_206836|ECI2|10455|enoyl-CoA delta isomerase 2##NM_001085401|C6orf201|404220|chromosome 6 open reading frame 201##BC047663|C6orf201|404220|chromosome 6 open reading frame 201##BC066986|C6orf201|404220|chromosome 6 open reading frame 201##AK291601|CDYL|9425|chromodomain protein, Y-like##BC108725|CDYL|9425|chromodomain protein, Y-like##NM_004824|CDYL|9425|chromodomain protein, Y-like##BC119682|CDYL|9425|chromodomain protein, Y-like##AK296985|CDYL|9425|chromodomain protein, Y-like##NM_001143970|CDYL|9425|chromodomain protein, Y-like	0.768613	CTCF.p2:12:0.769
chr7	20817766	20817856	reg1021357.p1	6.008	+	AY851364 BC110370 NM_001163942 NM_001163993 NM_178559 BC044248 AY090613 AY234788 AY851365 BC104894 BC104920	-130720	+	AB353947 NM_001163941 AY230001	-162514	+	BC002630 NM_002214 M73780	-447077	+	TSC_hg19_v1_chr7_-_20825382 AB464710	7571	-	TSC_hg19_v1_chr7_-_20826429 AK299947	8617	-	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	8723	-	AY851364|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC110370|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163942|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163993|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_178559|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC044248|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY090613|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY234788|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY851365|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC104894|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC104920|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AB353947|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163941|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY230001|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8##AK299947|SP8|221833|Sp8 transcription factor##AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor	0.021718	
chr7	99435720	99435830	reg1022319.p2	6.008	+	AF337813 NM_022820 NM_057095 NM_057096 BC100981 BC100982 AF280108 AF280109 AF280110 AF280111 AF280112 AF280113 AF319634 AY390423 AY390424 AY390425 AY390426	-10089	+	AJ563375 AJ563376 AJ563377 AY606313 CU686796 DQ924960 AF182273 BC069352 BC069418 D00003 M13785 X12387 J04449 M14096 M18907 BC101631 TSC_hg19_v1_chr7_-_99381808 AK298451 AK312967 AK298462 NM_001202855 NM_017460	-54016	-	AF315325 AJ563378 AJ563379 CU688294 D00408 BC069780 BC067436 NM_000765	-103009	-	NM_001005276 BC137375 BC137376	38892	-	BC011763 BC025949 TSC_hg19_v1_chr7_-_99517121	81344	-	TSC_hg19_v1_chr7_-_99517144 AK293565	81363	-	AF337813|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##NM_022820|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##NM_057095|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##NM_057096|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##BC100981|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##BC100982|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280108|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280109|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280110|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280111|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280112|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280113|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF319634|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AY390423|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AY390424|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AY390425|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AY390426|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AJ563375|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AJ563376|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AJ563377|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AY606313|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##DQ924960|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AF182273|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##BC069352|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##BC069418|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##D00003|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##M13785|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##X12387|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##J04449|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##M14096|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##M18907|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##BC101631|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AK298451|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AK312967|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AK298462|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##NM_001202855|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##NM_017460|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AF315325|CYP3A7|1551|cytochrome P450, family 3, subfamily A, polypeptide 7##AJ563378|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##AJ563379|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##D00408|CYP3A7|1551|cytochrome P450, family 3, subfamily A, polypeptide 7##BC069780|CYP3A7|1551|cytochrome P450, family 3, subfamily A, polypeptide 7##BC067436|CYP3A7|1551|cytochrome P450, family 3, subfamily A, polypeptide 7##NM_000765|CYP3A7|1551|cytochrome P450, family 3, subfamily A, polypeptide 7##NM_001005276|OR2AE1|81392|olfactory receptor, family 2, subfamily AE, member 1##BC137375|OR2AE1|81392|olfactory receptor, family 2, subfamily AE, member 1##BC137376|OR2AE1|81392|olfactory receptor, family 2, subfamily AE, member 1##BC011763|TRIM4|89122|tripartite motif containing 4##BC025949|TRIM4|89122|tripartite motif containing 4##AK293565|TRIM4|89122|tripartite motif containing 4	0.231137	CTCF.p2:30:0.231
chr9	135724121	135724227	reg1024691.p1	6.008	+	AF142328 NM_012204 TSC_hg19_v1_chr9_+_135545875 BC094774 BC011619 BC022787 BC104755 BC112245 AB529214	-178318	+	AF335567 AF335568 AF335569 AF427339 AK027484 NM_022779 NM_138620	-178387	-	TSC_hg19_v1_chr9_+_135545447 BC060821	-178756	+	TSC_hg19_v1_chr9_+_135753719 BC012940	29594	+	BC037402 BC050576 NM_152572	30006	-	AK075259 AJ011375 NM_018956	30112	+	AF142328|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##NM_012204|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC094774|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC011619|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC022787|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC104755|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC112245|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##AF335567|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF335568|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF335569|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF427339|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK027484|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##NM_022779|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##NM_138620|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC060821|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC012940|C9orf9|11092|chromosome 9 open reading frame 9##BC037402|AK8|158067|adenylate kinase 8##BC050576|AK8|158067|adenylate kinase 8##NM_152572|AK8|158067|adenylate kinase 8##AK075259|C9orf9|11092|chromosome 9 open reading frame 9##AJ011375|C9orf9|11092|chromosome 9 open reading frame 9##NM_018956|C9orf9|11092|chromosome 9 open reading frame 9	0.995666	CTCF.p2:-3:0.996
chr10	91714670	91714792	reg1021918.p1	6.007	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-215964	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-253356	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-309407	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	902715	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	903002	-	TSC_hg19_v1_chr10_+_92631241 BC006991	916526	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.997354	CTCF.p2:0:0.997
chr2	64852646	64852740	reg1023296.p1	6.007	+	TSC_hg19_v1_chr2_+_64751580 AL833962	-101091	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	-101209	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	-171045	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	28156	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	28354	-	TSC_hg19_v1_chr2_-_65090764 AK097952	238048	-	AL833962|AFTPH|54812|aftiphilin##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2	0.884641	CTCF.p2:19:0.885
chr4	132351573	132351692	reg1023081.p1	6.007	+	NM_001099783	-2334351	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-2336765	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-2337042	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	1718824	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	1721651	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	2771286	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.799737	CTCF.p2:20:0.800
chr4	152525564	152525674	reg1020643.p2	6.007	+	TSC_hg19_v1_chr4_+_152330327 NM_001109977	-195258	+	BC121109 BC121110 NM_183375	-327295	+	TSC_hg19_v1_chr4_-_152149045 AK294476 NM_001243349	-376508	-	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	156522	-	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	748277	-	NM_001013415 AY008274	778045	-	NM_001109977|FAM160A1|729830|family with sequence similarity 160, member A1##BC121109|PRSS48|345062|protease, serine, 48##BC121110|PRSS48|345062|protease, serine, 48##NM_183375|PRSS48|345062|protease, serine, 48##AK294476|SH3D19|152503|SH3 domain containing 19##NM_001243349|SH3D19|152503|SH3 domain containing 19##AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7	0.548405	CTCF.p2:-6:0.548
chr3	134396202	134396342	reg1024315.p1	6.006	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-26427	-	AK023448 BC068997 TSC_hg19_v1_chr3_+_134205041 NM_025180 AK056465	-191248	+	TSC_hg19_v1_chr3_+_134204899 NM_001042400	-191388	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	117879	+	TSC_hg19_v1_chr3_+_134514301 BC111744	118029	+	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	1288259	+	BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##AK023448|CEP63|80254|centrosomal protein 63kDa##BC068997|CEP63|80254|centrosomal protein 63kDa##NM_025180|CEP63|80254|centrosomal protein 63kDa##AK056465|CEP63|80254|centrosomal protein 63kDa##NM_001042400|CEP63|80254|centrosomal protein 63kDa##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC111744|EPHB1|2047|EPH receptor B1##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.285056	
chr5	114725654	114725755	reg1024054.p2	6.006	+	AB587510 AJ580807 NM_001040440	-93356	-	BC031242 AK307327 NM_152549	-93729	-	AY780790 AB590094 TSC_hg19_v1_chr5_-_114598563 NM_005023	-127138	-	TSC_hg19_v1_chr5_-_114880370 AL365415 AK315803 BC098385	154653	-	TSC_hg19_v1_chr5_-_114880540 BC028369 NM_020177	154859	-	BC109265 BC109266 NM_021649	212413	-	AJ580807|CCDC112|153733|coiled-coil domain containing 112##NM_001040440|CCDC112|153733|coiled-coil domain containing 112##BC031242|CCDC112|153733|coiled-coil domain containing 112##NM_152549|CCDC112|153733|coiled-coil domain containing 112##AY780790|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##NM_005023|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##AL365415|FEM1C|56929|fem-1 homolog c (C. elegans)##AK315803|FEM1C|56929|fem-1 homolog c (C. elegans)##BC098385|FEM1C|56929|fem-1 homolog c (C. elegans)##BC028369|FEM1C|56929|fem-1 homolog c (C. elegans)##NM_020177|FEM1C|56929|fem-1 homolog c (C. elegans)##BC109265|TICAM2|353376|toll-like receptor adaptor molecule 2##BC109266|TICAM2|353376|toll-like receptor adaptor molecule 2##NM_021649|TICAM2|353376|toll-like receptor adaptor molecule 2	0.332745	
chr5	115912997	115913177	reg1018704.p2	6.006	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-2573	-	TSC_hg19_v1_chr5_+_115898220 D28352	-14863	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-492366	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2411151	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2493724	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2494078	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr8	117715470	117715581	reg1022491.p1	6.006	+	TSC_hg19_v1_chr8_-_116681365 AF183810	-1034190	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	-1034360	-	TSC_hg19_v1_chr8_-_116680208 AK304046	-1035305	-	TSC_hg19_v1_chr8_-_117768041 BC000386 BT019594 CR456906 CU674186 AK222620 U54559 BC090880	52512	-	AK222520 TSC_hg19_v1_chr8_-_117768063 AK296162 NM_003756	52546	-	BC005955 BC022441 NM_032334 TSC_hg19_v1_chr8_+_117778752	63226	+	AF183810|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC000386|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BT019594|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##CR456906|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222620|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##U54559|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC090880|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222520|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK296162|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##NM_003756|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC005955|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC022441|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##NM_032334|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)	0.957154	CTCF.p2:1:0.957
chr9	124497413	124497506	reg1021454.p1	6.006	+	TSC_hg19_v1_chr9_+_124461442 AF367051	-35953	+	NM_032552	-168061	+	AF378121 AF378122 AF378123 TSC_hg19_v1_chr9_-_124262101 BC045756	-235370	-	AY032952 NM_138709	7604	+	TSC_hg19_v1_chr9_-_124855560 AK125178	358129	-	AF521886 NM_001139442 NM_194252	358425	-	AF367051|DAB2IP|153090|DAB2 interacting protein##NM_032552|DAB2IP|153090|DAB2 interacting protein##AF378121|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378122|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378123|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC045756|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AF521886|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_001139442|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_194252|TTLL11|158135|tubulin tyrosine ligase-like family, member 11	0.311341	CTCF.p2:1:0.311
chrX	115105294	115105393	reg1024538.p1	6.006	+	BC003645 TSC_hg19_v1_chrX_-_115085443	-19904	-	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-277475	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-308301	-	AK313927 NM_000686 X87723 U16957	196652	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	462424	+	TSC_hg19_v1_chrX_+_115567832 BC093710 BC093712	462494	+	BC003645|LOC642776|642776|uncharacterized LOC642776##NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##BC093710|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##BC093712|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.293257	CTCF.p2:5:0.293
chr1	207494837	207495017	reg1015138.p2	6.005	+	NM_000574 NM_001114752 TSC_hg19_v1_chr1_+_207494999 AF052110 AX772832	-15	+	TSC_hg19_v1_chr1_+_207277658 BC022312 NM_000715 AK303798 AK313164 M31452 AK303793	-217278	+	BC005378 NM_000716 NM_001017364 L11245 NM_001017367 AK315137	-232306	+	TSC_hg19_v1_chr1_+_207495024 AK312448 AK300621 AK298549 BC001288 M30142 M31516	108	+	TSC_hg19_v1_chr1_+_207495084 AB240569 AB240570	150	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	178	+	NM_000574|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_001114752|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AF052110|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BC022312|C4BPA|722|complement component 4 binding protein, alpha##NM_000715|C4BPA|722|complement component 4 binding protein, alpha##AK303798|C4BPA|722|complement component 4 binding protein, alpha##AK313164|C4BPA|722|complement component 4 binding protein, alpha##M31452|C4BPA|722|complement component 4 binding protein, alpha##AK303793|C4BPA|722|complement component 4 binding protein, alpha##BC005378|C4BPB|725|complement component 4 binding protein, beta##NM_000716|C4BPB|725|complement component 4 binding protein, beta##NM_001017364|C4BPB|725|complement component 4 binding protein, beta##L11245|C4BPB|725|complement component 4 binding protein, beta##NM_001017367|C4BPB|725|complement component 4 binding protein, beta##AK315137|C4BPB|725|complement component 4 binding protein, beta##AK312448|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK300621|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK298549|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BC001288|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M30142|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M31516|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240569|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240570|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)	0.0	
chr19	55770624	55770804	reg1023967.p2	6.005	+	TSC_hg19_v1_chr19_-_55770366 AB029038	-358	-	TSC_hg19_v1_chr19_-_55769920 NM_014931	-736	-	TSC_hg19_v1_chr19_-_55769905 BC094753	-840	-	TSC_hg19_v1_chr19_-_55791440 AF187859	20720	-	TSC_hg19_v1_chr19_-_55791484 BC002373 AB020592 AF093420 AK130781 AK075293	20753	-	TSC_hg19_v1_chr19_-_55791492 AK130636 AK129755	20803	-	AB029038|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1##NM_014931|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1##BC094753|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1##AF187859|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##BC002373|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##AB020592|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##AF093420|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##AK130781|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##AK075293|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##AK130636|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1##AK129755|HSPBP1|23640|HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1	0.0	
chr3	16592102	16592283	reg1001245.p1	6.004	+	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	-36968	-	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	-37174	-	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-285484	+	BX648638 AK303026 NM_001190811	54078	-	U65918 U66726 U66078 BC027595 NM_001351	54774	-	AB029015 NM_001144382	334259	+	D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2	0.0	
chr6_qbl_hap6	2808186	2808316	reg1024163.p1	6.004	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.013387	
chr10	81903794	81903975	reg1000180.p2	6.003	+	TSC_hg19_v1_chr10_+_81892497 HQ258029 EU446996	-11379	+	BC117332 BC117334 TSC_hg19_v1_chr10_+_81892485	-11427	+	BC066348 BC090922 NM_001012973	-11627	+	BC007564 TSC_hg19_v1_chr10_-_81965258 L19605 AB209770	61309	-	TSC_hg19_v1_chr10_-_81965287 AK298362	61397	-	TSC_hg19_v1_chr10_-_81965288 AK222918	61405	-	HQ258029|PLAC9|219348|placenta-specific 9##EU446996|PLAC9|219348|placenta-specific 9##BC117332|PLAC9|219348|placenta-specific 9##BC117334|PLAC9|219348|placenta-specific 9##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9##BC007564|ANXA11|311|annexin A11##L19605|ANXA11|311|annexin A11##AB209770|ANXA11|311|annexin A11##AK298362|ANXA11|311|annexin A11##AK222918|ANXA11|311|annexin A11	0.020629	
chr11	40150938	40151075	reg1026213.p1	6.003	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-3531204	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-3534902	+	NM_000448 M29474	-3561438	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	163588	-	AB046800 NM_020929	164657	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	3182512	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.675799	CTCF.p2:14:0.676
chr15	93155744	93155877	reg1021229.p2	6.003	+	AK057393 NM_153040	-140904	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	-218611	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-758243	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	43069	-	BC110328 TSC_hg19_v1_chr15_-_93277463	121579	-	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	287676	+	AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##BC110328|FAM174B|400451|family with sequence similarity 174, member B##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2	0.0	
chr20	62541139	62541270	reg1022592.p1	6.003	+	TSC_hg19_v1_chr20_+_62526520 BC053642	-14680	+	AK289585 TSC_hg19_v1_chr20_+_62526490	-14714	+	TSC_hg19_v1_chr20_+_62526454 NM_025219	-14741	+	AK303688 NM_001193379	41298	-	TSC_hg19_v1_chr20_-_62587770 BC033078 AJ605558 AK000524 AK223220 AK301602 AK222559 NM_017859	46571	-	TSC_hg19_v1_chr20_-_62601275 BC125129 BC125128 NM_020713	60069	-	BC053642|DNAJC5|80331|DnaJ (Hsp40) homolog, subfamily C, member 5##AK289585|DNAJC5|80331|DnaJ (Hsp40) homolog, subfamily C, member 5##NM_025219|DNAJC5|80331|DnaJ (Hsp40) homolog, subfamily C, member 5##AK303688|UCKL1|54963|uridine-cytidine kinase 1-like 1##NM_001193379|UCKL1|54963|uridine-cytidine kinase 1-like 1##BC033078|UCKL1|54963|uridine-cytidine kinase 1-like 1##AJ605558|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK000524|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK223220|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK301602|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK222559|UCKL1|54963|uridine-cytidine kinase 1-like 1##NM_017859|UCKL1|54963|uridine-cytidine kinase 1-like 1##BC125129|ZNF512B|57473|zinc finger protein 512B##BC125128|ZNF512B|57473|zinc finger protein 512B##NM_020713|ZNF512B|57473|zinc finger protein 512B	0.756347	CTCF.p2:-31:0.756
chr5	156769933	156770063	reg1024450.p2	6.003	+	BC011762 BC021008 NM_014376	-73642	+	TSC_hg19_v1_chr5_+_156693105 AL136549 NM_001037333 AK294220 AK295865 AK297401 AK303702 AB032994 AF160973 NM_001037332	-76746	+	BC094701 AB209622 D13720 NM_005546 BC109077 BC109078 AK312846 AK303609 AB590549	-162081	+	AK289701 BC022570 NM_001001343	2702	-	TSC_hg19_v1_chr5_+_156820161 AK172724	50190	+	AK296972 NM_001099287 NM_001172292	117028	+	BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB209622|ITK|3702|IL2-inducible T-cell kinase##D13720|ITK|3702|IL2-inducible T-cell kinase##NM_005546|ITK|3702|IL2-inducible T-cell kinase##BC109077|ITK|3702|IL2-inducible T-cell kinase##BC109078|ITK|3702|IL2-inducible T-cell kinase##AK312846|ITK|3702|IL2-inducible T-cell kinase##AK303609|ITK|3702|IL2-inducible T-cell kinase##AK289701|FNDC9|408263|fibronectin type III domain containing 9##BC022570|FNDC9|408263|fibronectin type III domain containing 9##NM_001001343|FNDC9|408263|fibronectin type III domain containing 9##AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK296972|NIPAL4|348938|NIPA-like domain containing 4##NM_001099287|NIPAL4|348938|NIPA-like domain containing 4##NM_001172292|NIPAL4|348938|NIPA-like domain containing 4	1.015703	CTCF.p2:9:0.993
chr8	111059994	111060111	reg1022549.p1	6.003	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-73086	-	NM_001099743 NM_001099744	-356033	-	AK290469 NM_001099745 NM_001099746	-366819	-	AB114605 NM_198124	3329329	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	3389077	-	TSC_hg19_v1_chr8_-_116680208 AK304046	5620168	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.728003	CTCF.p2:-5:0.728
chr9	137273605	137273773	reg1025011.p2	6.003	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-55289	+	TSC_hg19_v1_chr9_+_137218317 BC063827 NM_002957	-55374	+	AJ011376 NM_052821 AB464354	-268735	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	259958	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	260121	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	498971	+	BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##BC063827|RXRA|6256|retinoid X receptor, alpha##NM_002957|RXRA|6256|retinoid X receptor, alpha##AJ011376|WDR5|11091|WD repeat domain 5##NM_052821|WDR5|11091|WD repeat domain 5##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##D90279|COL5A1|1289|collagen, type V, alpha 1##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	0.015013	
chr14	60364633	60364732	reg1022253.p2	6.002	+	AB587373 TSC_hg19_v1_chr14_-_60337495 BC111694 L10333 BC090862 BC068510 NM_021136	-27229	-	AK290534 NM_206852 TSC_hg19_v1_chr14_-_60097533	-267149	-	TSC_hg19_v1_chr14_-_60097342 BC000314 BC003003 AK297492	-267338	-	NM_022495 TSC_hg19_v1_chr14_+_60558640 AK095489	194145	+	AY359031 TSC_hg19_v1_chr14_-_60632031 BC000637	267350	-	TSC_hg19_v1_chr14_-_60632103 BC007337 AF151844 AK313285 AL117420 NM_016029	267452	-	BC111694|RTN1|6252|reticulon 1##L10333|RTN1|6252|reticulon 1##BC090862|RTN1|6252|reticulon 1##BC068510|RTN1|6252|reticulon 1##NM_021136|RTN1|6252|reticulon 1##AK290534|RTN1|6252|reticulon 1##NM_206852|RTN1|6252|reticulon 1##BC000314|RTN1|6252|reticulon 1##BC003003|RTN1|6252|reticulon 1##AK297492|RTN1|6252|reticulon 1##NM_022495|C14orf135|64430|chromosome 14 open reading frame 135##AK095489|C14orf135|64430|chromosome 14 open reading frame 135##AY359031|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC000637|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC007337|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AF151844|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AK313285|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AL117420|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_016029|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7	0.017908	
chr15	100468677	100468776	reg1019319.p1	6.001	+	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-195092	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-195122	-	TSC_hg19_v1_chr15_-_100273591 BC084545 AK124852	-195160	-	AB527357 AJ315735 NM_139057	413417	-	BC034500 BC034970 NM_178842	616171	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	673683	-	BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC084545|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK124852|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)	0.997117	CTCF.p2:-30:0.997
chr5	16667061	16667189	reg1024989.p1	6.001	+	TSC_hg19_v1_chr5_-_16617097 BC053326 AK025808 NM_001034850	-50000	-	NM_019000	-158019	-	TSC_hg19_v1_chr5_-_16465884 BC010545 BC008752 NM_033414 AY046059	-201249	-	TSC_hg19_v1_chr5_-_16738346 AK295736	71295	-	AK316138 TSC_hg19_v1_chr5_-_16742338	75212	-	BC050682 BC041694 TSC_hg19_v1_chr5_-_16936357 BC108736 BC032669	269203	-	BC053326|FAM134B|54463|family with sequence similarity 134, member B##AK025808|FAM134B|54463|family with sequence similarity 134, member B##NM_001034850|FAM134B|54463|family with sequence similarity 134, member B##NM_019000|FAM134B|54463|family with sequence similarity 134, member B##BC010545|ZNF622|90441|zinc finger protein 622##BC008752|ZNF622|90441|zinc finger protein 622##NM_033414|ZNF622|90441|zinc finger protein 622##AY046059|ZNF622|90441|zinc finger protein 622##AK295736|MYO10|4651|myosin X##AK316138|MYO10|4651|myosin X##BC050682|MYO10|4651|myosin X##BC041694|MYO10|4651|myosin X##BC108736|MYO10|4651|myosin X##BC032669|MYO10|4651|myosin X	0.970841	CTCF.p2:-5:0.204	CTCF.p2:-6:0.767
chr4	122292028	122292148	reg1022334.p1	6.000	+	AK303192 NM_001244764	-143468	-	AK301058 NM_001128843	-154307	-	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	-206604	-	TSC_hg19_v1_chr4_-_122302115 NM_198179 AK309337	10074	-	BC012804 BC012822 TSC_hg19_v1_chr4_-_122618109 BC004993 X12454 D00172 M21731	326024	-	TSC_hg19_v1_chr4_-_122618136 AK297909 M19384 BC018671 BC032093	326045	-	AK303192|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3##AK301058|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3##AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3##NM_198179|QRFPR|84109|pyroglutamylated RFamide peptide receptor##AK309337|QRFPR|84109|pyroglutamylated RFamide peptide receptor##BC012804|ANXA5|308|annexin A5##BC012822|ANXA5|308|annexin A5##BC004993|ANXA5|308|annexin A5##X12454|ANXA5|308|annexin A5##D00172|ANXA5|308|annexin A5##M21731|ANXA5|308|annexin A5##AK297909|ANXA5|308|annexin A5##M19384|ANXA5|308|annexin A5##BC018671|ANXA5|308|annexin A5##BC032093|ANXA5|308|annexin A5	0.976292	CTCF.p2:-8:0.976
chr5	180240556	180240706	reg1027112.p1	6.000	+	TSC_hg19_v1_chr5_-_180237136 NM_001114617	-3504	-	NM_001114618 AK094130	-3809	-	TSC_hg19_v1_chr5_-_180230897 NM_001114619 NM_001114620 AK290769	-9719	-	AK057194 AK124428 TSC_hg19_v1_chr5_-_180242542	1911	-	TSC_hg19_v1_chr5_+_180257959 AK308536	17321	+	TSC_hg19_v1_chr5_+_180258018 BC047586	17374	+	NM_001114617|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_001114618|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK094130|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_001114619|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_001114620|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK290769|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK057194|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##BC047586|LOC729678|729678|uncharacterized LOC729678	0.212707	
chr7	103982129	103982265	reg1028602.p1	6.000	+	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-12979	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-133766	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-352201	-	TSC_hg19_v1_chr7_-_104567089 BC050337	584893	-	TSC_hg19_v1_chr7_-_104653491 AK124046	671285	-	TSC_hg19_v1_chr7_-_104654062 AK094372	671877	-	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##BC050337|LOC723809|723809|uncharacterized LOC723809##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545	0.1113	
chr12	117135173	117135240	reg1043556.p2	5.999	+	NM_001085481	-138021	+	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	-163977	+	TSC_hg19_v1_chr12_-_116715263 AY338463	-420046	-	TSC_hg19_v1_chr12_-_117175822 AK309652 BC019843 AK025068 NM_024738	40532	-	TSC_hg19_v1_chr12_-_117175868 AK222983 AK298857	40663	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	40913	+	NM_001085481|MAP1LC3B2|643246|microtubule-associated protein 1 light chain 3 beta 2##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173##AY338463|MED13L|23389|mediator complex subunit 13-like##AK309652|C12orf49|79794|chromosome 12 open reading frame 49##BC019843|C12orf49|79794|chromosome 12 open reading frame 49##AK025068|C12orf49|79794|chromosome 12 open reading frame 49##NM_024738|C12orf49|79794|chromosome 12 open reading frame 49##AK222983|C12orf49|79794|chromosome 12 open reading frame 49##AK298857|C12orf49|79794|chromosome 12 open reading frame 49##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2	0.0	
chr13	88323553	88323653	reg1021039.p2	5.999	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-1950164	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-3867103	-	TSC_hg19_v1_chr13_-_84456424 BC051738	-3867178	-	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	1266	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	3727301	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	5555824	+	BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6	0.826171	CTCF.p2:15:0.826
chr14	76618327	76618507	reg1025940.p1	5.999	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-111	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-140	+	TSC_hg19_v1_chr14_+_76618258 NM_017926 NM_017972 BC058032	-161	+	NM_004452	219272	+	TSC_hg19_v1_chr14_+_77227817 AK094330	609383	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	610038	+	AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_017926|C14orf118|55668|chromosome 14 open reading frame 118##NM_017972|C14orf118|55668|chromosome 14 open reading frame 118##BC058032|C14orf118|55668|chromosome 14 open reading frame 118##NM_004452|ESRRB|2103|estrogen-related receptor beta##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1	0.0	
chr20	24145142	24145221	reg1020694.p1	5.999	+	BC040904 NM_178311	-175766	-	L20492 L20491 NM_178312	-177710	-	AB590893 CU686872 HQ447459 BC069514 X70377 BC062678 NM_001900	-284835	-	AK024282 NM_024893	304653	+	TSC_hg19_v1_chr20_+_24450295 BC030637	305121	+	TSC_hg19_v1_chr20_+_24929865 NM_003650	784682	+	BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20492|GGTLC1|92086|gamma-glutamyltransferase light chain 1##L20491|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178312|GGTLC1|92086|gamma-glutamyltransferase light chain 1##HQ447459|CST5|1473|cystatin D##BC069514|CST5|1473|cystatin D##X70377|CST5|1473|cystatin D##BC062678|CST5|1473|cystatin D##NM_001900|CST5|1473|cystatin D##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1##BC030637|SYNDIG1|79953|synapse differentiation inducing 1##NM_003650|CST7|8530|cystatin F (leukocystatin)	0.927918	CTCF.p2:18:0.928
chr4	25314188	25314347	reg1022333.p1	5.999	+	TSC_hg19_v1_chr4_+_25235654 BC051749 NM_018323 AK128622 AK001967 AY091514 AY065990 AF411320	-78549	+	AK296302 AK095450 TSC_hg19_v1_chr4_+_25162325	-151962	+	AF146396 AJ277541 BC117202 BC126213 TSC_hg19_v1_chr4_-_25162072 AJ238617 EU832146 EU832239 BC023539 BX648976 BC012188 AK292476 NM_016955	-152212	-	TSC_hg19_v1_chr4_+_25314405 NM_024936 BC157834 BC171821 AK299211 AK309675 AY629351 BC016914 AF161537 CU677765	180	+	TSC_hg19_v1_chr4_+_25378862 NM_013367 BC059383	64578	+	TSC_hg19_v1_chr4_+_25378893 AK292336 AF191338	64695	+	BC051749|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##NM_018323|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK128622|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK001967|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AY091514|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AY065990|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AF411320|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK296302|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK095450|LOC285540|285540|uncharacterized LOC285540##AF146396|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ277541|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC117202|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC126213|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ238617|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832146|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832239|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC023539|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BX648976|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC012188|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AK292476|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##NM_016955|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4##NM_013367|ANAPC4|29945|anaphase promoting complex subunit 4##BC059383|ANAPC4|29945|anaphase promoting complex subunit 4##AK292336|ANAPC4|29945|anaphase promoting complex subunit 4##AF191338|ANAPC4|29945|anaphase promoting complex subunit 4	0.411923	CTCF.p2:1:0.374
chr6_ssto_hap7	4237349	4237447	reg1020858.p1	5.999	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.460478	CTCF.p2:-8:0.460
chr9	15837210	15837325	reg1022419.p1	5.999	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-284246	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-326307	-	AF098483 AF098482 NM_021144	-327020	-	TSC_hg19_v1_chr9_-_16727889 AY438376	890630	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	1033400	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	1033499	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.992839	CTCF.p2:2:0.993
chr1	36565715	36565810	reg1000113.p2	5.998	+	NM_017825 AF212236 TSC_hg19_v1_chr1_+_36554492 AJ427295 AK000453 AK295283 BC014169 AK316349 AK223037 CR457237	-11284	+	TSC_hg19_v1_chr1_+_36549714 BC035620 AK313610	-16039	+	AF054910 NM_014466 TSC_hg19_v1_chr1_+_36549694	-16076	+	AK074129 BC096295 BC096296 BC096297 BC099645 NM_005202	87	-	AJ224335 TSC_hg19_v1_chr1_-_36615058 AY007139	49274	-	BC007662 NM_014408 AF041432 TSC_hg19_v1_chr1_-_36615078 AK315610	49328	-	NM_017825|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AF212236|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AJ427295|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK000453|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK295283|ADPRHL2|54936|ADP-ribosylhydrolase like 2##BC014169|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK316349|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK223037|ADPRHL2|54936|ADP-ribosylhydrolase like 2##CR457237|ADPRHL2|54936|ADP-ribosylhydrolase like 2##BC035620|TEKT2|27285|tektin 2 (testicular)##AK313610|TEKT2|27285|tektin 2 (testicular)##AF054910|TEKT2|27285|tektin 2 (testicular)##NM_014466|TEKT2|27285|tektin 2 (testicular)##AK074129|COL8A2|1296|collagen, type VIII, alpha 2##BC096295|COL8A2|1296|collagen, type VIII, alpha 2##BC096296|COL8A2|1296|collagen, type VIII, alpha 2##BC096297|COL8A2|1296|collagen, type VIII, alpha 2##BC099645|COL8A2|1296|collagen, type VIII, alpha 2##NM_005202|COL8A2|1296|collagen, type VIII, alpha 2##AJ224335|TRAPPC3|27095|trafficking protein particle complex 3##AY007139|TRAPPC3|27095|trafficking protein particle complex 3##BC007662|TRAPPC3|27095|trafficking protein particle complex 3##NM_014408|TRAPPC3|27095|trafficking protein particle complex 3##AF041432|TRAPPC3|27095|trafficking protein particle complex 3##AK315610|TRAPPC3|27095|trafficking protein particle complex 3	0.813678	CTCF.p2:-1:0.814
chr2	61108071	61108203	reg1022398.p2	5.998	+	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	-124653	+	AF080216 TSC_hg19_v1_chr2_-_60780784	-327359	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	-327615	-	TSC_hg19_v1_chr2_+_61108702 AK303926	568	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	600	+	TSC_hg19_v1_chr2_+_61108776 BC143885 BC117191 X75042	650	+	NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC143885|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC117191|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##X75042|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)	0.739054	CTCF.p2:9:0.739
chr10	64578610	64578699	reg1001906.p3	5.997	+	TSC_hg19_v1_chr10_-_64576127 NM_000399 NM_001136177 NM_001136179	-2507	-	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	-2557	-	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	-13997	+	AK312813 NM_001136178	272	-	TSC_hg19_v1_chr10_+_64893044 NM_030759 AK054957 AL136656	314377	+	TSC_hg19_v1_chr10_+_64893098 AF267866 AK301656 AK225257 AK225256 AY267839 AY267840 BC011707 AB590768 EU832288 EU832373	314492	+	NM_000399|EGR2|1959|early growth response 2##NM_001136177|EGR2|1959|early growth response 2##NM_001136179|EGR2|1959|early growth response 2##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK312813|EGR2|1959|early growth response 2##NM_001136178|EGR2|1959|early growth response 2##NM_030759|NRBF2|29982|nuclear receptor binding factor 2##AK054957|NRBF2|29982|nuclear receptor binding factor 2##AL136656|NRBF2|29982|nuclear receptor binding factor 2##AF267866|NRBF2|29982|nuclear receptor binding factor 2##AK301656|NRBF2|29982|nuclear receptor binding factor 2##AK225257|NRBF2|29982|nuclear receptor binding factor 2##AK225256|NRBF2|29982|nuclear receptor binding factor 2##AY267839|NRBF2|29982|nuclear receptor binding factor 2##AY267840|NRBF2|29982|nuclear receptor binding factor 2##BC011707|NRBF2|29982|nuclear receptor binding factor 2##EU832288|NRBF2|29982|nuclear receptor binding factor 2##EU832373|NRBF2|29982|nuclear receptor binding factor 2	0.530585	CTCF.p2:36:0.516
chr16	71780497	71780597	reg1021603.p2	5.997	+	TSC_hg19_v1_chr16_-_71757789 AK124678	-22783	-	AB463166 AM393067 AM393542 BC129927 BC129983 NM_015020	-31847	-	BC005052 NM_001017967 NM_052858 AK307585 BC011893 BC013376 AK056842 AK292185 CU680584	-120450	+	AL110198 TSC_hg19_v1_chr16_-_71782208	1642	-	TSC_hg19_v1_chr16_-_71842690 AB015317 Y12226	62087	-	TSC_hg19_v1_chr16_-_71842738 AK293233 AK225906 AK294546 AK299630	62206	-	AK124678|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AM393067|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AM393542|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129927|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129983|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##NM_015020|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC005052|MARVELD3|91862|MARVEL domain containing 3##NM_001017967|MARVELD3|91862|MARVEL domain containing 3##NM_052858|MARVELD3|91862|MARVEL domain containing 3##AK307585|MARVELD3|91862|MARVEL domain containing 3##BC011893|MARVELD3|91862|MARVEL domain containing 3##BC013376|MARVELD3|91862|MARVEL domain containing 3##AK056842|MARVELD3|91862|MARVEL domain containing 3##AK292185|MARVELD3|91862|MARVEL domain containing 3##AL110198|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AB015317|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##Y12226|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK293233|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK225906|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK294546|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK299630|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit	0.997883	CTCF.p2:-7:0.998
chr18	43973342	43973452	reg1020265.p2	5.997	+	AK091537 AK122819 AK127467 AX747044 NM_152470	-59211	+	TSC_hg19_v1_chr18_+_43913942 AK055997	-59465	+	TSC_hg19_v1_chr18_+_43754065 AK289738	-219315	+	AK057232 BC047720 NM_001145473 NM_001173129	125643	-	BC041860 AK302484 NM_001145472	165863	-	NM_144612	263598	-	AK091537|RNF165-IT1|147341|RNF165 intronic transcript 1 (non-protein coding)##AK122819|RNF165|494470|ring finger protein 165##AK127467|RNF165|494470|ring finger protein 165##NM_152470|RNF165|494470|ring finger protein 165##AK055997|RNF165|494470|ring finger protein 165##AK289738|C18orf25|147339|chromosome 18 open reading frame 25##AK057232|LOXHD1|125336|lipoxygenase homology domains 1##BC047720|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145473|LOXHD1|125336|lipoxygenase homology domains 1##NM_001173129|LOXHD1|125336|lipoxygenase homology domains 1##BC041860|LOXHD1|125336|lipoxygenase homology domains 1##AK302484|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145472|LOXHD1|125336|lipoxygenase homology domains 1##NM_144612|LOXHD1|125336|lipoxygenase homology domains 1	0.152076	
chr19	13477493	13477596	reg1022902.p2	5.997	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-213364	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-216252	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-216405	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	139632	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	365035	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	381175	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.863269	CTCF.p2:-5:0.863
chr2	108553374	108553491	reg1022212.p2	5.997	+	NM_182588 TSC_hg19_v1_chr2_+_108443399	-110038	+	TSC_hg19_v1_chr2_-_107503517 AX795200 AB059555 BC008680 AK307784 NM_001142352 NM_032528 FJ433883	-1049886	-	TSC_hg19_v1_chr2_-_107503063 FJ433884	-1050370	-	AK315280 AB084377 AK300801 AB043997 NM_021815 BC111525 BC111524	49570	+	AB528243 NM_001008743	310218	+	AF186252 AF186255 NM_001056 NM_176825 AF186251 AF186254 AK297086 AK313193 AK298306 U66036 AF186253 AF186256 AB008164 AF026303 BC005353	351853	+	NM_182588|RGPD4|285190|RANBP2-like and GRIP domain containing 4##AB059555|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##BC008680|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##AK307784|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142352|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_032528|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##AK315280|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB084377|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AK300801|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB043997|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_021815|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111525|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111524|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3##AF186252|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186255|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001056|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_176825|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186251|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186254|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK297086|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK313193|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK298306|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##U66036|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186253|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186256|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AB008164|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF026303|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC005353|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2	0.996637	CTCF.p2:-6:0.997
chr6	36091531	36091712	reg1000942.p1	5.997	+	TSC_hg19_v1_chr6_+_35995587 BC000092 BC031574 L35264	-95965	+	AK303414 TSC_hg19_v1_chr6_+_35995584	-96038	+	TSC_hg19_v1_chr6_+_35995536 AK291709 L35263	-96076	+	NM_002754 TSC_hg19_v1_chr6_+_36098292 AK308018 BC085196 AF004709 BC000433 BC001641 BC004428 Y10488 AF092535 U93232 AF100546 AB451221 AB451344 AB463892 BT007221 CR536490 CR541687 DQ891372 DQ894551 EU832156 EU832250 AK222922	6693	+	TSC_hg19_v1_chr6_+_36164569 AB033112 NM_015695	72939	+	TSC_hg19_v1_chr6_-_36164979 BC042825	73363	-	BC000092|MAPK14|1432|mitogen-activated protein kinase 14##BC031574|MAPK14|1432|mitogen-activated protein kinase 14##L35264|MAPK14|1432|mitogen-activated protein kinase 14##AK303414|MAPK14|1432|mitogen-activated protein kinase 14##AK291709|MAPK14|1432|mitogen-activated protein kinase 14##L35263|MAPK14|1432|mitogen-activated protein kinase 14##NM_002754|MAPK13|5603|mitogen-activated protein kinase 13##AK308018|MAPK13|5603|mitogen-activated protein kinase 13##BC085196|MAPK13|5603|mitogen-activated protein kinase 13##AF004709|MAPK13|5603|mitogen-activated protein kinase 13##BC000433|MAPK13|5603|mitogen-activated protein kinase 13##BC001641|MAPK13|5603|mitogen-activated protein kinase 13##BC004428|MAPK13|5603|mitogen-activated protein kinase 13##Y10488|MAPK13|5603|mitogen-activated protein kinase 13##AF092535|MAPK13|5603|mitogen-activated protein kinase 13##U93232|MAPK13|5603|mitogen-activated protein kinase 13##AF100546|MAPK13|5603|mitogen-activated protein kinase 13##AB451221|MAPK13|5603|mitogen-activated protein kinase 13##AB451344|MAPK13|5603|mitogen-activated protein kinase 13##BT007221|MAPK13|5603|mitogen-activated protein kinase 13##CR536490|MAPK13|5603|mitogen-activated protein kinase 13##CR541687|MAPK13|5603|mitogen-activated protein kinase 13##DQ891372|MAPK13|5603|mitogen-activated protein kinase 13##DQ894551|MAPK13|5603|mitogen-activated protein kinase 13##EU832156|MAPK13|5603|mitogen-activated protein kinase 13##EU832250|MAPK13|5603|mitogen-activated protein kinase 13##AK222922|MAPK13|5603|mitogen-activated protein kinase 13##AB033112|BRPF3|27154|bromodomain and PHD finger containing, 3##NM_015695|BRPF3|27154|bromodomain and PHD finger containing, 3	0.0	
chr1	89073965	89074098	reg1024393.p1	5.996	+	TSC_hg19_v1_chr1_+_87797426 BC065818	-1276616	+	TSC_hg19_v1_chr1_+_87797312 AY321514	-1276706	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	-1279350	+	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	76064	+	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	283180	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	283242	-	BC065818|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB	0.719523	CTCF.p2:-27:0.720
chr3	160438297	160438393	reg1019942.p1	5.996	+	AK026248 NM_025047 BC034354	-43390	+	TSC_hg19_v1_chr3_-_160283387 BC034493 NM_002268	-154957	-	TSC_hg19_v1_chr3_-_160283329 BC028691 AK291041	-155025	-	TSC_hg19_v1_chr3_+_160473386 BC110801	34995	+	AY337264 NM_139245	35650	+	AB050856 NM_033169 TSC_hg19_v1_chr3_-_160823138 AY359049 BC047618 AK223439 BC028571 AF154848 AK022491 AK095917 NM_001038628 NM_003781 NM_033167 NM_033168	384592	-	AK026248|ARL14|80117|ADP-ribosylation factor-like 14##NM_025047|ARL14|80117|ADP-ribosylation factor-like 14##BC034354|ARL14|80117|ADP-ribosylation factor-like 14##BC034493|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##NM_002268|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##BC110801|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)	0.498079	CTCF.p2:9:0.498
chr10	42687995	42688130	reg1023571.p1	5.995	+	TSC_hg19_v1_chr10_-_38691741 BC171738 BC042387 BC048143	-3996306	-	AK295332 AY829267 AF165514 AF165517 BC071987 TSC_hg19_v1_chr10_+_38645320 AK293968 AK307174 CU687208	-4042725	+	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	-4304779	+	TSC_hg19_v1_chr10_-_42863441 AF519622 AK131313	175401	-	AX721135 TSC_hg19_v1_chr10_-_43048257 AK308832 AK026980 BC045697 AX721116	360140	-	TSC_hg19_v1_chr10_-_43134018 BC109232 BC160932 BC065181 BC107726 BC048313 AJ491697 NM_006955 AK096683 AK309564 AK304306 BC036398	445936	-	BC171738|SEPT7L|285961|septin 7-like##BC042387|SEPT7L|285961|septin 7-like##BC048143|SEPT7L|285961|septin 7-like##AK295332|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AY829267|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165514|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165517|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC071987|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK293968|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK307174|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A##AF519622|LOC441666|441666|zinc finger protein 91 pseudogene##AK308832|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##AK026980|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC045697|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC109232|ZNF33B|7582|zinc finger protein 33B##BC160932|ZNF33B|7582|zinc finger protein 33B##BC065181|ZNF33B|7582|zinc finger protein 33B##BC107726|ZNF33B|7582|zinc finger protein 33B##BC048313|ZNF33B|7582|zinc finger protein 33B##AJ491697|ZNF33B|7582|zinc finger protein 33B##NM_006955|ZNF33B|7582|zinc finger protein 33B##AK096683|ZNF33B|7582|zinc finger protein 33B##AK309564|ZNF33B|7582|zinc finger protein 33B##AK304306|ZNF33B|7582|zinc finger protein 33B##BC036398|ZNF33B|7582|zinc finger protein 33B	0.995099	CTCF.p2:32:0.995
chr10	79971359	79971460	reg1023452.p1	5.995	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-177778	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-177853	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-182095	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	857379	+	TSC_hg19_v1_chr10_+_80899458 AK025812	928075	+	TSC_hg19_v1_chr10_+_81003207 AB033050	1031721	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.964685	CTCF.p2:6:0.965
chr16	30066455	30066579	reg1024064.p1	5.995	+	TSC_hg19_v1_chr16_+_30064512 AK098778 BC004333 AK308495	-2017	+	NM_000034 AK308748 TSC_hg19_v1_chr16_+_30064461	-2081	+	AB593090 AB593089 AF370365 NM_031478	-24363	-	TSC_hg19_v1_chr16_+_30075504 M11560	8957	+	BC016800 TSC_hg19_v1_chr16_+_30075534 NM_184043 BC013614	9069	+	TSC_hg19_v1_chr16_+_30075771 NM_001127617	9249	+	AK098778|ALDOA|226|aldolase A, fructose-bisphosphate##BC004333|ALDOA|226|aldolase A, fructose-bisphosphate##AK308495|ALDOA|226|aldolase A, fructose-bisphosphate##NM_000034|ALDOA|226|aldolase A, fructose-bisphosphate##AK308748|ALDOA|226|aldolase A, fructose-bisphosphate##AB593090|FAM57B|83723|family with sequence similarity 57, member B##AB593089|FAM57B|83723|family with sequence similarity 57, member B##AF370365|FAM57B|83723|family with sequence similarity 57, member B##NM_031478|FAM57B|83723|family with sequence similarity 57, member B##M11560|ALDOA|226|aldolase A, fructose-bisphosphate##BC016800|ALDOA|226|aldolase A, fructose-bisphosphate##NM_184043|ALDOA|226|aldolase A, fructose-bisphosphate##BC013614|ALDOA|226|aldolase A, fructose-bisphosphate##NM_001127617|ALDOA|226|aldolase A, fructose-bisphosphate	0.919723	CTCF.p2:8:0.920
chr2	202545548	202545688	reg1026923.p1	5.995	+	AK303954 NM_001044385 AK304395	-37394	-	CU688718 AK090601 AX746528 TSC_hg19_v1_chr2_-_202507394 BC029611 NM_152388	-38225	-	TSC_hg19_v1_chr2_-_202483899 BC030659 BX648732 AL833429 NM_001168216 NM_001168217 NM_001168221 NM_152525	-61717	-	AB053303 DQ426883 BX647162 BX648531 AB053302 AB053304 AF316032 NM_033066	17766	-	AK090992 TSC_hg19_v1_chr2_-_202645631	99994	-	TSC_hg19_v1_chr2_-_202645657 BC071576 AB053305 AB053306 AF391100 AK023024 BC029174 AK291029	100047	-	AK303954|TMEM237|65062|transmembrane protein 237##NM_001044385|TMEM237|65062|transmembrane protein 237##AK304395|TMEM237|65062|transmembrane protein 237##AK090601|TMEM237|65062|transmembrane protein 237##BC029611|TMEM237|65062|transmembrane protein 237##NM_152388|TMEM237|65062|transmembrane protein 237##BC030659|ALS2CR11|151254|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11##BX648732|ALS2CR11|151254|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11##AL833429|ALS2CR11|151254|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11##NM_001168216|ALS2CR11|151254|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11##NM_001168217|ALS2CR11|151254|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11##NM_001168221|ALS2CR11|151254|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11##NM_152525|ALS2CR11|151254|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11##AB053303|MPP4|58538|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)##DQ426883|MPP4|58538|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)##BX647162|MPP4|58538|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)##BX648531|MPP4|58538|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)##AB053302|MPP4|58538|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)##AB053304|MPP4|58538|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)##AF316032|MPP4|58538|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)##NM_033066|MPP4|58538|membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)##BC071576|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053305|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053306|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AF391100|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AK023024|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##BC029174|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AK291029|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)	1.01134	CTCF.p2:17:0.998
chr19	11909373	11909463	reg1005620.p4	5.994	+	AK297479 NM_152356 AK096593	-39	+	NM_152355 TSC_hg19_v1_chr19_+_11877884 AK095956	-31558	+	X51760 BC052597 AK308189 NM_001080493 AK300579 AK303213	-59660	-	TSC_hg19_v1_chr19_+_11925098 AK095252 NM_152357 BC035760	15688	+	AL833935 NM_152262	67425	+	TSC_hg19_v1_chr19_+_11998643 BC051309 NM_021915 EU446913	89255	+	AK297479|ZNF491|126069|zinc finger protein 491##NM_152356|ZNF491|126069|zinc finger protein 491##AK096593|ZNF491|126069|zinc finger protein 491##NM_152355|ZNF441|126068|zinc finger protein 441##AK095956|ZNF441|126068|zinc finger protein 441##X51760|ZNF823|55552|zinc finger protein 823##BC052597|ZNF823|55552|zinc finger protein 823##AK308189|ZNF823|55552|zinc finger protein 823##NM_001080493|ZNF823|55552|zinc finger protein 823##AK300579|ZNF823|55552|zinc finger protein 823##AK303213|ZNF823|55552|zinc finger protein 823##AK095252|ZNF440|126070|zinc finger protein 440##NM_152357|ZNF440|126070|zinc finger protein 440##BC035760|ZNF440|126070|zinc finger protein 440##AL833935|ZNF439|90594|zinc finger protein 439##NM_152262|ZNF439|90594|zinc finger protein 439##BC051309|ZNF69|7620|zinc finger protein 69##NM_021915|ZNF69|7620|zinc finger protein 69##EU446913|ZNF69|7620|zinc finger protein 69	0.0	
chr1	30584460	30584553	reg1024284.p1	5.993	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-1021458	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-1027059	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-1027126	-	TSC_hg19_v1_chr1_+_31191648 AK057725	607125	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	611926	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	646126	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	0.634565	CTCF.p2:-8:0.635
chr5	73968899	73969042	reg1023793.p2	5.993	+	AK096578 NM_003633	-31722	-	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	-32507	-	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	-859620	+	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	12038	+	TSC_hg19_v1_chr5_+_73981057 AK130375 BC017378 CU675968 BT009919 M19735	12118	+	TSC_hg19_v1_chr5_-_74029248 AK126251	60302	-	AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)##AK130375|HEXB|3074|hexosaminidase B (beta polypeptide)##BC017378|HEXB|3074|hexosaminidase B (beta polypeptide)##BT009919|HEXB|3074|hexosaminidase B (beta polypeptide)##M19735|HEXB|3074|hexosaminidase B (beta polypeptide)	0.999243	CTCF.p2:-14:0.999
chr9	104221435	104221556	reg1023950.p1	5.993	+	X01098 TSC_hg19_v1_chr9_-_104198057 AK026411 AK290795 BC029399 NM_000035 X02747	-23421	-	TSC_hg19_v1_chr9_+_104161232 AK290163 AK313655 AK308935 NM_003452 NM_197977 BC065718 BC092425 AF025770 U75454 U95992 BC126120 BC143876 BC143877	-60251	+	TSC_hg19_v1_chr9_-_104160901 BC032008 AK295521 AK000500 AK025643 NM_019051	-60598	-	TSC_hg19_v1_chr9_-_104249468 AK313981 BC006115 NM_032342	27952	-	TSC_hg19_v1_chr9_+_104296134 AF265230 NM_019592 AK022532 BC110584 BC110585 BC152309	74635	+	TSC_hg19_v1_chr9_+_104296143 BC016691 BC063115	74652	+	X01098|ALDOB|229|aldolase B, fructose-bisphosphate##AK026411|ALDOB|229|aldolase B, fructose-bisphosphate##AK290795|ALDOB|229|aldolase B, fructose-bisphosphate##BC029399|ALDOB|229|aldolase B, fructose-bisphosphate##NM_000035|ALDOB|229|aldolase B, fructose-bisphosphate##X02747|ALDOB|229|aldolase B, fructose-bisphosphate##AK290163|ZNF189|7743|zinc finger protein 189##AK313655|ZNF189|7743|zinc finger protein 189##AK308935|ZNF189|7743|zinc finger protein 189##NM_003452|ZNF189|7743|zinc finger protein 189##NM_197977|ZNF189|7743|zinc finger protein 189##BC065718|ZNF189|7743|zinc finger protein 189##BC092425|ZNF189|7743|zinc finger protein 189##AF025770|ZNF189|7743|zinc finger protein 189##U75454|ZNF189|7743|zinc finger protein 189##U95992|ZNF189|7743|zinc finger protein 189##BC126120|ZNF189|7743|zinc finger protein 189##BC143876|ZNF189|7743|zinc finger protein 189##BC143877|ZNF189|7743|zinc finger protein 189##BC032008|MRPL50|54534|mitochondrial ribosomal protein L50##AK000500|MRPL50|54534|mitochondrial ribosomal protein L50##NM_019051|MRPL50|54534|mitochondrial ribosomal protein L50##AK313981|C9orf125|84302|chromosome 9 open reading frame 125##BC006115|C9orf125|84302|chromosome 9 open reading frame 125##NM_032342|C9orf125|84302|chromosome 9 open reading frame 125##AF265230|RNF20|56254|ring finger protein 20##NM_019592|RNF20|56254|ring finger protein 20##AK022532|RNF20|56254|ring finger protein 20##BC110584|RNF20|56254|ring finger protein 20##BC110585|RNF20|56254|ring finger protein 20##BC152309|RNF20|56254|ring finger protein 20##BC016691|RNF20|56254|ring finger protein 20##BC063115|RNF20|56254|ring finger protein 20	0.30955	CTCF.p2:-10:0.310
chr12	15090765	15090863	reg1021772.p1	5.992	+	BT006733 CR450358 DQ892495 DQ895707 X07362 AY542304 M58549 BC070314 X53331 BC005272 AK310040 AK312029 BC093078 TSC_hg19_v1_chr12_-_15038794 NM_000900 NM_001190839	-52026	-	AY829433 AY829434 NM_021071 AK291662 TSC_hg19_v1_chr12_-_14996461	-94390	-	BC132752 BC132754 AK092637 AX747644 NM_001013698	-123711	-	CU688844 BC030218 AY358536 NM_152321 AK056677	647	-	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	23734	-	NM_006205 DQ980604 D45399	35152	+	BT006733|MGP|4256|matrix Gla protein##CR450358|MGP|4256|matrix Gla protein##DQ892495|MGP|4256|matrix Gla protein##DQ895707|MGP|4256|matrix Gla protein##X07362|MGP|4256|matrix Gla protein##AY542304|MGP|4256|matrix Gla protein##M58549|MGP|4256|matrix Gla protein##BC070314|MGP|4256|matrix Gla protein##X53331|MGP|4256|matrix Gla protein##BC005272|MGP|4256|matrix Gla protein##AK312029|MGP|4256|matrix Gla protein##BC093078|MGP|4256|matrix Gla protein##NM_000900|MGP|4256|matrix Gla protein##NM_001190839|MGP|4256|matrix Gla protein##AY829433|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##AY829434|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##NM_021071|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##AK291662|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##BC132752|C12orf69|440087|chromosome 12 open reading frame 69##BC132754|C12orf69|440087|chromosome 12 open reading frame 69##AK092637|C12orf69|440087|chromosome 12 open reading frame 69##NM_001013698|C12orf69|440087|chromosome 12 open reading frame 69##BC030218|ERP27|121506|endoplasmic reticulum protein 27##AY358536|ERP27|121506|endoplasmic reticulum protein 27##NM_152321|ERP27|121506|endoplasmic reticulum protein 27##AK056677|ERP27|121506|endoplasmic reticulum protein 27##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma	0.376048	CTCF.p2:-9:0.376
chr16	66378594	66378707	reg1023489.p1	5.992	+	TSC_hg19_v1_chr16_-_65155987 AK297377	-1222656	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	-1222682	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	-1222748	-	NM_001795 TSC_hg19_v1_chr16_+_66400538	21883	+	TSC_hg19_v1_chr16_+_66400559 U84722	21910	+	AK300461 TSC_hg19_v1_chr16_+_66400593 X59796 AK300299 AB209908 AB035304 BC096363 BC096364 BC096365 BC117520	21952	+	AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	0.999362	CTCF.p2:-10:0.999
chr20	34099792	34099903	reg1023696.p1	5.992	+	TSC_hg19_v1_chr20_+_34042987 AK307861 AB621828 AF049105 NM_007186	-56773	+	AB593125 U13660 NM_000557	-73857	-	TSC_hg19_v1_chr20_-_33999791 AK225281 AK293149 BC119013 BC122862 AY050659 NM_001184977 NM_018244 NM_199487	-99985	-	AK058089 AK310337 NM_001145350	17616	-	NM_015966 NM_198398 TSC_hg19_v1_chr20_+_34129827 AF308298 AF077030 AF151812 EF206690 BC014014	29955	+	AK074550 BC009765 TSC_hg19_v1_chr20_+_34129829 AK096484 AK300916	29983	+	AK307861|CEP250|11190|centrosomal protein 250kDa##AF049105|CEP250|11190|centrosomal protein 250kDa##NM_007186|CEP250|11190|centrosomal protein 250kDa##AB593125|GDF5|8200|growth differentiation factor 5##U13660|GDF5|8200|growth differentiation factor 5##NM_000557|GDF5|8200|growth differentiation factor 5##AK225281|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293149|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC119013|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC122862|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AY050659|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_001184977|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_018244|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_199487|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK058089|C20orf173|140873|chromosome 20 open reading frame 173##AK310337|C20orf173|140873|chromosome 20 open reading frame 173##NM_001145350|C20orf173|140873|chromosome 20 open reading frame 173##NM_015966|ERGIC3|51614|ERGIC and golgi 3##NM_198398|ERGIC3|51614|ERGIC and golgi 3##AF308298|ERGIC3|51614|ERGIC and golgi 3##AF077030|ERGIC3|51614|ERGIC and golgi 3##AF151812|ERGIC3|51614|ERGIC and golgi 3##EF206690|ERGIC3|51614|ERGIC and golgi 3##BC014014|ERGIC3|51614|ERGIC and golgi 3##AK074550|ERGIC3|51614|ERGIC and golgi 3##BC009765|ERGIC3|51614|ERGIC and golgi 3##AK096484|ERGIC3|51614|ERGIC and golgi 3##AK300916|ERGIC3|51614|ERGIC and golgi 3	0.0	
chr1	31904834	31904998	reg1016122.p2	5.991	+	AK093784 AK316357 AX748305 NM_001199039 NM_018565 AK296118	-18229	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	-18850	+	NM_001199037 AK298512	-21883	+	NM_001204414 NM_022164 TSC_hg19_v1_chr1_+_32042115 AK292770 AK075398 AK296322 AK298382	137187	+	TSC_hg19_v1_chr1_+_32042122 AY358421	137206	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	137226	+	AK093784|SERINC2|347735|serine incorporator 2##AK316357|SERINC2|347735|serine incorporator 2##NM_001199039|SERINC2|347735|serine incorporator 2##NM_018565|SERINC2|347735|serine incorporator 2##AK296118|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##NM_001204414|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_022164|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK292770|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK075398|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK296322|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298382|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AY358421|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1	0.0	
chr15	77952229	77952318	reg1023894.p1	5.991	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-27493	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-27574	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-239011	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	417680	-	NM_001101404	432653	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	471489	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.99869	CTCF.p2:-30:0.999
chr17	62935146	62935273	reg1021265.p1	5.991	+	TSC_hg19_v1_chr17_-_62915587 AK294371	-19613	-	AB011135 NM_199340	-20307	-	AB384498 TSC_hg19_v1_chr17_-_62893379 BC043145 BC048966	-41818	-	TSC_hg19_v1_chr17_-_62971685 BX537538 AK056627 BC063466 AK311317	36411	-	TSC_hg19_v1_chr17_-_63009302 AK026902	74097	-	TSC_hg19_v1_chr17_-_63052724 AB528470 AF493902 CU691408 DQ893572 DQ894448 AK313672	117509	-	AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3##NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC043145|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC048966|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BX537538|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK056627|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##BC063466|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK311317|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AF493902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ893572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ894448|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AK313672|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	0.997539	CTCF.p2:-17:0.998
chr5	69711022	69711144	reg1023254.p1	5.991	+	TSC_hg19_v1_chr5_+_69696959 AK097091	-14164	+	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	-365651	+	NM_021967 NM_022968 BC021174 NM_001178087 NM_022978 AF073519 AF073518 BC035932 BC093880 BC171749 BC101970 BC103687 BC104738 BC143260 BC093882 BC143255	-389918	+	TSC_hg19_v1_chr5_-_69882021 AK097091	170947	-	NM_021967 NM_022968 BC021174 NM_001178087 NM_022978 AF073519 AF073518 BC035932 BC093880 BC171749 BC101970 BC103687 BC104738 BC143260 BC093882 BC143255	485500	+	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	509767	+	AK097091|SMA4|11039|glucuronidase, beta pseudogene##NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric##NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AK097091|SMA4|11039|glucuronidase, beta pseudogene##NM_021967|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_022968|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC021174|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##NM_001178087|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_022978|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##AF073519|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##AF073518|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC035932|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC093880|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC171749|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC101970|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC103687|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC104738|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC143260|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##BC093882|SERF1A|8293|small EDRK-rich factor 1A (telomeric)##BC143255|SERF1B|728492|small EDRK-rich factor 1B (centromeric)##NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric	0.0	
chr10	76179781	76179901	reg1023394.p1	5.990	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-243254	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-243311	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-243359	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	406513	+	AY686755 NM_001003892 BC137321 BC137322	638464	-	AB027004 AB103375 NM_016364	679406	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.99241	CTCF.p2:-39:0.992
chr11	111270553	111270668	reg1025165.p1	5.990	+	NM_006235	-20454	-	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	-20658	-	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	-100577	+	BC031045 NM_017589	112460	-	AK128145 NM_001100388 NM_207430 BC039505	114912	+	AK055539 NM_178834	140622	+	NM_006235|POU2AF1|5450|POU class 2 associating factor 1##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##BC031045|BTG4|54766|B-cell translocation gene 4##NM_017589|BTG4|54766|B-cell translocation gene 4##AK128145|C11orf88|399949|chromosome 11 open reading frame 88##NM_001100388|C11orf88|399949|chromosome 11 open reading frame 88##NM_207430|C11orf88|399949|chromosome 11 open reading frame 88##BC039505|C11orf88|399949|chromosome 11 open reading frame 88##AK055539|LAYN|143903|layilin##NM_178834|LAYN|143903|layilin	0.0	
chr11	59885960	59886067	reg1023691.p1	5.990	+	AK304487 AK310142 NM_000139 D10583 BC074800 BC074843 AB590499 JF411082	-29826	+	TSC_hg19_v1_chr11_+_59824137 L35848 BC008487	-61864	+	TSC_hg19_v1_chr11_+_59824100 NM_001031666 NM_001031809 NM_006138	-61927	+	AK301387 TSC_hg19_v1_chr11_-_59950526 AB013104 AF350502 AF350503 AF142409 BC022854 BC108728 AK026454 AF212240 AF237908 AF253977 AF261136 AF354930 AK300725 NM_022349 NM_152851	64637	-	AK291870 NM_001247999 NM_152852	66125	-	NM_001243266 NM_024021 NM_148975 AK292089 AK075081 TSC_hg19_v1_chr11_+_60048138 BC020648 CU676600 DQ891395 DQ894573 AB022821 AK314033 AB013102	162080	+	AK304487|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##AK310142|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##NM_000139|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##D10583|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##BC074800|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##BC074843|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##JF411082|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##L35848|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##BC008487|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##NM_001031666|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##NM_001031809|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##NM_006138|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##AK301387|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AB013104|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF350502|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF350503|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF142409|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC022854|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC108728|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK026454|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF212240|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF237908|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF253977|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF261136|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF354930|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK300725|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_022349|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152851|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK291870|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001247999|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001243266|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_024021|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_148975|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK292089|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK075081|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC020648|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ891395|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ894573|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB022821|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK314033|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB013102|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4	0.08627	
chr21	43481612	43481785	reg1022593.p1	5.990	+	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	-51227	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	-107615	-	BC062323 AL833323 NM_199050	-134909	-	AB051810 AB051811 NM_001199527 NM_001199528	1369	+	AB096965 AY771619 AY771620 NM_001004416 NM_173568	9727	+	AF323660 NM_207627 AF323661 NM_207628	138161	+	AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1##AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	0.0	
chr10	112116502	112116675	reg1018868.p1	5.989	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-51888	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-51995	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-130767	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	141163	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	210904	+	AF067163 TSC_hg19_v1_chr10_+_112344155	227527	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.0	
chr1	206785786	206785949	reg1023994.p1	5.989	+	DQ891590 DQ894784 TSC_hg19_v1_chr1_-_206785812 BC039134 BC058905 AK225259 BC001585 AF220417 AF262403 AK294536 AK001852	-112	-	TSC_hg19_v1_chr1_+_206730897 CU692112 EU831661	-54970	+	AL832784 AY261332 AK292039 TSC_hg19_v1_chr1_+_206730613	-55259	+	TSC_hg19_v1_chr1_-_206785905 NM_001201478 NM_006893	16	-	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	22977	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	23243	+	DQ891590|EIF2D|1939|eukaryotic translation initiation factor 2D##DQ894784|EIF2D|1939|eukaryotic translation initiation factor 2D##BC039134|EIF2D|1939|eukaryotic translation initiation factor 2D##BC058905|EIF2D|1939|eukaryotic translation initiation factor 2D##AK225259|EIF2D|1939|eukaryotic translation initiation factor 2D##BC001585|EIF2D|1939|eukaryotic translation initiation factor 2D##AF220417|EIF2D|1939|eukaryotic translation initiation factor 2D##AF262403|EIF2D|1939|eukaryotic translation initiation factor 2D##AK294536|EIF2D|1939|eukaryotic translation initiation factor 2D##AK001852|EIF2D|1939|eukaryotic translation initiation factor 2D##EU831661|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AL832784|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY261332|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AK292039|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##NM_001201478|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_006893|EIF2D|1939|eukaryotic translation initiation factor 2D##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3	0.0	
chr1	236615411	236615545	reg1026402.p1	5.989	+	AK096339 NM_080738 AY028914 AK291930 BC006533 AY071862	-56656	+	AK290862 AY028913 NM_145861 BC106873 BC106874 BC114557 BC114560 BC128082	-57795	+	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	-170162	-	NM_201545 AK098613	66063	+	AF074000 AF074001 AF074002 NM_006499 NM_201543	71260	+	NM_201544 BC016486	71573	+	AK096339|EDARADD|128178|EDAR-associated death domain##NM_080738|EDARADD|128178|EDAR-associated death domain##AY028914|EDARADD|128178|EDAR-associated death domain##AK291930|EDARADD|128178|EDAR-associated death domain##BC006533|EDARADD|128178|EDAR-associated death domain##AY071862|EDARADD|128178|EDAR-associated death domain##AK290862|EDARADD|128178|EDAR-associated death domain##AY028913|EDARADD|128178|EDAR-associated death domain##NM_145861|EDARADD|128178|EDAR-associated death domain##BC114557|EDARADD|128178|EDAR-associated death domain##BC114560|EDARADD|128178|EDAR-associated death domain##BC128082|EDARADD|128178|EDAR-associated death domain##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_201545|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AK098613|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AF074000|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AF074001|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AF074002|LGALS8|3964|lectin, galactoside-binding, soluble, 8##NM_006499|LGALS8|3964|lectin, galactoside-binding, soluble, 8##NM_201543|LGALS8|3964|lectin, galactoside-binding, soluble, 8##NM_201544|LGALS8|3964|lectin, galactoside-binding, soluble, 8##BC016486|LGALS8|3964|lectin, galactoside-binding, soluble, 8	0.917451	CTCF.p2:1:0.917
chr5	38551648	38551787	reg1022999.p1	5.989	+	NM_182801 BC033177 AK092994 AX747843 BC033188	-106093	+	NM_182798 AK097549 BC031251	-148076	+	CU687828 TSC_hg19_v1_chr5_+_38258922	-292828	+	TSC_hg19_v1_chr5_-_38556749 AK290059 NM_001127671	5011	-	AK308158 AK309882 NM_002310	43789	-	NM_001168355 TSC_hg19_v1_chr5_+_38845959	294242	+	NM_182801|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033177|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK092994|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033188|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha##AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha##AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_001168355|OSMR|9180|oncostatin M receptor	0.047632	
chr5	8341005	8341093	reg1023101.p1	5.989	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-471739	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-471790	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-471917	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	1205145	-	BC095521 NM_019599	1289413	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	1908935	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.01871	
chr6	110016808	110016927	reg1024033.p1	5.989	+	TSC_hg19_v1_chr6_+_110012521 AK222732	-4343	+	TSC_hg19_v1_chr6_+_110012514 AK291671 AK293422 D87464	-4359	+	NM_014845 TSC_hg19_v1_chr6_+_110012488 BC041338	-4411	+	BC126301 BC117298 BC043414 NM_005284 HQ258210 HQ258216 HQ709190 HQ709191	283389	+	TSC_hg19_v1_chr6_-_110500864 BC019019 BC021022 BC044591 AK097838 BC068546	483976	-	TSC_hg19_v1_chr6_-_110501166 NM_001024934 NM_001024935 NM_001024936 NM_003931	484318	-	AK222732|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK291671|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##AK293422|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##D87464|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##NM_014845|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##BC041338|FIG4|9896|FIG4 homolog, SAC1 lipid phosphatase domain containing (S. cerevisiae)##BC126301|GPR6|2830|G protein-coupled receptor 6##BC117298|GPR6|2830|G protein-coupled receptor 6##BC043414|GPR6|2830|G protein-coupled receptor 6##NM_005284|GPR6|2830|G protein-coupled receptor 6##HQ258210|GPR6|2830|G protein-coupled receptor 6##HQ258216|GPR6|2830|G protein-coupled receptor 6##HQ709190|GPR6|2830|G protein-coupled receptor 6##BC044591|WASF1|8936|WAS protein family, member 1##AK097838|WASF1|8936|WAS protein family, member 1##BC068546|WASF1|8936|WAS protein family, member 1##NM_001024934|WASF1|8936|WAS protein family, member 1##NM_001024935|WASF1|8936|WAS protein family, member 1##NM_001024936|WASF1|8936|WAS protein family, member 1##NM_003931|WASF1|8936|WAS protein family, member 1	0.973202	CTCF.p2:20:0.973
chr11	110304556	110304737	reg1024169.p2	5.988	+	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	-3930	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	-137333	-	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	-340516	+	AY496266 TSC_hg19_v1_chr11_-_110582834	278157	-	TSC_hg19_v1_chr11_-_110582887 AB037812	278279	-	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	278639	-	NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20##AB037812|ARHGAP20|57569|Rho GTPase activating protein 20##AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20	0.995423	CTCF.p2:31:0.995
chr1	20492072	20492188	reg1020152.p1	5.988	+	TSC_hg19_v1_chr1_+_20480706 BC041651	-11367	+	AK093645 AX748240 BX647458 NM_022819 AB528809	-26262	+	AB590095 AM392918 AM392954 AM392977 AM393597 AM393824 BC025706 NM_012400 AF112982 AY358606 AK290406 AF188625 AK310156 AK311903 AK301396	-46106	-	NM_001105572	9556	-	BC047428 NM_152376 BX648631 AK058158 TSC_hg19_v1_chr1_+_20512591	20454	+	NM_001039500 AK125833	125290	+	AK093645|PLA2G2F|64600|phospholipase A2, group IIF##BX647458|PLA2G2F|64600|phospholipase A2, group IIF##NM_022819|PLA2G2F|64600|phospholipase A2, group IIF##AM392918|PLA2G2D|26279|phospholipase A2, group IID##AM392954|PLA2G2D|26279|phospholipase A2, group IID##AM392977|PLA2G2D|26279|phospholipase A2, group IID##AM393597|PLA2G2D|26279|phospholipase A2, group IID##AM393824|PLA2G2D|26279|phospholipase A2, group IID##BC025706|PLA2G2D|26279|phospholipase A2, group IID##NM_012400|PLA2G2D|26279|phospholipase A2, group IID##AF112982|PLA2G2D|26279|phospholipase A2, group IID##AY358606|PLA2G2D|26279|phospholipase A2, group IID##AK290406|PLA2G2D|26279|phospholipase A2, group IID##AF188625|PLA2G2D|26279|phospholipase A2, group IID##AK310156|PLA2G2D|26279|phospholipase A2, group IID##AK311903|PLA2G2D|26279|phospholipase A2, group IID##AK301396|PLA2G2D|26279|phospholipase A2, group IID##NM_001105572|PLA2G2C|391013|phospholipase A2, group IIC##BC047428|UBXN10|127733|UBX domain protein 10##NM_152376|UBXN10|127733|UBX domain protein 10##BX648631|UBXN10|127733|UBX domain protein 10##AK058158|UBXN10|127733|UBX domain protein 10##NM_001039500|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AK125833|VWA5B1|127731|von Willebrand factor A domain containing 5B1	0.511637	CTCF.p2:-23:0.512
chr13	27504517	27504635	reg1023416.p1	5.988	+	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	-169723	-	TSC_hg19_v1_chr13_+_27131892 AF454702	-372674	+	TSC_hg19_v1_chr13_+_27131854 AK289845 BC050283 NM_006646	-372742	+	DQ894074 AF022789 TSC_hg19_v1_chr13_-_27745948 AK289685	241285	-	TSC_hg19_v1_chr13_-_27746003 BC026072 NM_182488	241510	-	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	321166	+	AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12##AF454702|WASF3|10810|WAS protein family, member 3##AK289845|WASF3|10810|WAS protein family, member 3##BC050283|WASF3|10810|WAS protein family, member 3##NM_006646|WASF3|10810|WAS protein family, member 3##DQ894074|USP12|219333|ubiquitin specific peptidase 12##AF022789|USP12|219333|ubiquitin specific peptidase 12##AK289685|USP12|219333|ubiquitin specific peptidase 12##BC026072|USP12|219333|ubiquitin specific peptidase 12##NM_182488|USP12|219333|ubiquitin specific peptidase 12##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21	0.988499	CTCF.p2:3:0.988
chr2	233386917	233387028	reg1023207.p1	5.988	+	NM_001195129	-1800	+	AB030579 Y16187 AY358923 NM_004826 BC050453	-34439	-	AK313163 NM_001631 BC132678 M31008 M15694	-66102	+	AK300109 BC093923 BC093925 AK291526 AK296704 AK304890 AK315297 TSC_hg19_v1_chr2_+_233390910 NM_000751 X55019	3923	+	AK125362 AK309340 NM_005199 TSC_hg19_v1_chr2_+_233404441 BC111802	17474	+	TSC_hg19_v1_chr2_-_233415265 AK056329 NM_145702 BC063500	28263	-	NM_001195129|PRSS56|646960|protease, serine, 56##AB030579|ECEL1|9427|endothelin converting enzyme-like 1##Y16187|ECEL1|9427|endothelin converting enzyme-like 1##AY358923|ECEL1|9427|endothelin converting enzyme-like 1##NM_004826|ECEL1|9427|endothelin converting enzyme-like 1##BC050453|ECEL1|9427|endothelin converting enzyme-like 1##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal##AK300109|CHRND|1144|cholinergic receptor, nicotinic, delta##BC093923|CHRND|1144|cholinergic receptor, nicotinic, delta##BC093925|CHRND|1144|cholinergic receptor, nicotinic, delta##AK291526|CHRND|1144|cholinergic receptor, nicotinic, delta##AK296704|CHRND|1144|cholinergic receptor, nicotinic, delta##AK304890|CHRND|1144|cholinergic receptor, nicotinic, delta##AK315297|CHRND|1144|cholinergic receptor, nicotinic, delta##NM_000751|CHRND|1144|cholinergic receptor, nicotinic, delta##X55019|CHRND|1144|cholinergic receptor, nicotinic, delta##AK125362|CHRNG|1146|cholinergic receptor, nicotinic, gamma##AK309340|CHRNG|1146|cholinergic receptor, nicotinic, gamma##NM_005199|CHRNG|1146|cholinergic receptor, nicotinic, gamma##BC111802|CHRNG|1146|cholinergic receptor, nicotinic, gamma##AK056329|TIGD1|200765|tigger transposable element derived 1##NM_145702|TIGD1|200765|tigger transposable element derived 1##BC063500|TIGD1|200765|tigger transposable element derived 1	1.025135	CTCF.p2:7:0.998
chrX	81931994	81932093	reg1023006.p1	5.988	+	TSC_hg19_v1_chrX_+_80457600 BC016709 AL136718 AK129610 AF042081 AK310011 AB590910 CR533478	-1474395	+	TSC_hg19_v1_chrX_+_80457572 AK309351	-1474467	+	AK094058 AX748432 NM_030763	-1474603	-	AK314967 NM_000307 TSC_hg19_v1_chrX_+_82763302 X82324 AB464667	831256	+	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	1184128	+	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	1510929	-	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5##AK314967|POU3F4|5456|POU class 3 homeobox 4##NM_000307|POU3F4|5456|POU class 3 homeobox 4##X82324|POU3F4|5456|POU class 3 homeobox 4##BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	0.969659	CTCF.p2:-6:0.970
chr1	169131160	169131294	reg1020768.p1	5.987	+	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	-55258	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	-432798	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-585435	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	205865	-	NM_003666 AF288161 U79751 AK223533	205996	+	TSC_hg19_v1_chr1_+_169337450 AK307151 AK291725 BC020716	206222	+	AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_003666|BLZF1|8548|basic leucine zipper nuclear factor 1##AF288161|BLZF1|8548|basic leucine zipper nuclear factor 1##U79751|BLZF1|8548|basic leucine zipper nuclear factor 1##AK223533|BLZF1|8548|basic leucine zipper nuclear factor 1##AK307151|BLZF1|8548|basic leucine zipper nuclear factor 1##AK291725|BLZF1|8548|basic leucine zipper nuclear factor 1##BC020716|BLZF1|8548|basic leucine zipper nuclear factor 1	0.022494	
chr8	23103769	23103949	reg1013581.p1	5.986	+	AK097202 NM_152272 BC042050	-2701	+	TSC_hg19_v1_chr8_-_23082664 NM_003844	-21193	-	FJ795027 AB590225 BT006906 CU680426 DQ891791 DQ894973 JF729355 U90875 TSC_hg19_v1_chr8_-_23082598 AK291299 BC012866	-21247	-	TSC_hg19_v1_chr8_+_23104147 AK315664 AK021776	276	+	TSC_hg19_v1_chr8_+_23104153 AK092500 AX747573 AL833843 BC019110 AK296592 CU676386 BC004344	383	+	TSC_hg19_v1_chr8_+_23145620 NM_001136108 AK293465	41738	+	AK097202|CHMP7|91782|charged multivesicular body protein 7##NM_152272|CHMP7|91782|charged multivesicular body protein 7##BC042050|CHMP7|91782|charged multivesicular body protein 7##NM_003844|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##FJ795027|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BT006906|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ891791|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ894973|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##JF729355|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##U90875|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##AK291299|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BC012866|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##AK315664|CHMP7|91782|charged multivesicular body protein 7##AK021776|CHMP7|91782|charged multivesicular body protein 7##AK092500|CHMP7|91782|charged multivesicular body protein 7##AL833843|CHMP7|91782|charged multivesicular body protein 7##BC019110|CHMP7|91782|charged multivesicular body protein 7##AK296592|CHMP7|91782|charged multivesicular body protein 7##BC004344|CHMP7|91782|charged multivesicular body protein 7##NM_001136108|R3HCC1|203069|R3H domain and coiled-coil containing 1##AK293465|R3HCC1|203069|R3H domain and coiled-coil containing 1	0.0	
chr10	76736401	76736540	reg1023523.p1	5.985	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-150116	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-799883	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-799940	+	AY686755 NM_001003892 BC137321 BC137322	81835	-	AB027004 AB103375 NM_016364	122777	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	132444	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr1	19814348	19814471	reg1022547.p1	5.985	+	NM_001206540 NM_004930 TSC_hg19_v1_chr1_-_19812073	-2320	-	TSC_hg19_v1_chr1_-_19812006 AK125085	-2403	-	TSC_hg19_v1_chr1_-_19811972 AK313113 BC107752	-2442	-	TSC_hg19_v1_chr1_+_19923483 NM_001032363 NM_001204082 NM_001204083 NM_001204088 NM_001204089 AK289456 BC070388 AK094318 BC009927	109070	+	D28352 TSC_hg19_v1_chr1_+_19934590 CU687246	120181	+	AK300872 NM_182744	155313	+	NM_001206540|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_004930|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##AK125085|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##AK313113|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##BC107752|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_001032363|MINOS1|440574|mitochondrial inner membrane organizing system 1##NM_001204082|MINOS1|440574|mitochondrial inner membrane organizing system 1##NM_001204083|MINOS1|440574|mitochondrial inner membrane organizing system 1##NM_001204088|C1orf151-NBL1|100532736|C1orf151-NBL1 readthrough##NM_001204089|C1orf151-NBL1|100532736|C1orf151-NBL1 readthrough##AK289456|C1orf151-NBL1|100532736|C1orf151-NBL1 readthrough##BC070388|MINOS1|440574|mitochondrial inner membrane organizing system 1##AK094318|MINOS1|440574|mitochondrial inner membrane organizing system 1##BC009927|MINOS1|440574|mitochondrial inner membrane organizing system 1##AK300872|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_182744|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1	0.0	
chr16	62160461	62160568	reg1024406.p1	5.985	+	AK124734 NM_001796	-89776	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-3392317	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-3441858	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	2995388	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	2995454	-	TSC_hg19_v1_chr16_-_65155987 AK297377	2995480	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.120049	
chr7	131936863	131936985	reg1024323.p2	5.985	+	TSC_hg19_v1_chr7_-_131833385 AL834504	-103529	-	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	-695561	-	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-924285	+	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	255996	-	AK123428 TSC_hg19_v1_chr7_-_132261230	324306	-	TSC_hg19_v1_chr7_-_132261268 NM_001105543 NM_020911	324371	-	AL834504|PLXNA4|91584|plexin A4##BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4##AK123428|PLXNA4|91584|plexin A4##NM_001105543|PLXNA4|91584|plexin A4##NM_020911|PLXNA4|91584|plexin A4	0.392293	CTCF.p2:6:0.392
chr10	93129895	93129998	reg1023488.p1	5.984	+	TSC_hg19_v1_chr10_+_92980539 AL832496	-149412	+	TSC_hg19_v1_chr10_+_92980445 NM_032373	-149538	+	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	-207184	+	BC071762 TSC_hg19_v1_chr10_+_93170064	40112	+	TSC_hg19_v1_chr10_+_93170100 NM_173497 NM_182765 AK295723 AK094625 BC040187 EU832472 EU832551 BX537856	40235	+	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	262815	-	AL832496|PCGF5|84333|polycomb group ring finger 5##NM_032373|PCGF5|84333|polycomb group ring finger 5##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5##NM_173497|HECTD2|143279|HECT domain containing 2##NM_182765|HECTD2|143279|HECT domain containing 2##AK295723|HECTD2|143279|HECT domain containing 2##AK094625|HECTD2|143279|HECT domain containing 2##BC040187|HECTD2|143279|HECT domain containing 2##EU832472|HECTD2|143279|HECT domain containing 2##EU832551|HECTD2|143279|HECT domain containing 2##BX537856|HECTD2|143279|HECT domain containing 2##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C	0.974044	CTCF.p2:1:0.974
chr1	212004115	212004295	reg1024086.p1	5.984	+	D86960 NM_014873 TSC_hg19_v1_chr1_-_212004119	-75	-	BC034621 TSC_hg19_v1_chr1_-_212003681	-457	-	BT019729 CU688108 AB527570 AY045701 Z29066 AK223353 AK225522 AK303092 TSC_hg19_v1_chr1_-_211848968 U11050 BC043502 BC065932 BC052807 NM_001204182 NM_001204183 NM_002497	-155297	-	AM392654 CU676544 BC030716 TSC_hg19_v1_chr1_-_212208866 BC033918 AK001363 AK022509 BC009918 BC020523 AK297225 AK001598 NM_001199809 NM_001199811 NM_001199812 NM_015434	204685	-	NM_016448 AK292343 TSC_hg19_v1_chr1_+_212209090 AK000742 AK303346	204809	+	BC033540 TSC_hg19_v1_chr1_+_212209112 AF345896	204913	+	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##BC034621|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##BT019729|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AY045701|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##Z29066|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK223353|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK225522|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK303092|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##U11050|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC043502|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC065932|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC052807|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204182|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204183|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_002497|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AM392654|INTS7|25896|integrator complex subunit 7##BC030716|INTS7|25896|integrator complex subunit 7##BC033918|INTS7|25896|integrator complex subunit 7##AK001363|INTS7|25896|integrator complex subunit 7##AK022509|INTS7|25896|integrator complex subunit 7##BC009918|INTS7|25896|integrator complex subunit 7##BC020523|INTS7|25896|integrator complex subunit 7##AK297225|INTS7|25896|integrator complex subunit 7##AK001598|INTS7|25896|integrator complex subunit 7##NM_001199809|INTS7|25896|integrator complex subunit 7##NM_001199811|INTS7|25896|integrator complex subunit 7##NM_001199812|INTS7|25896|integrator complex subunit 7##NM_015434|INTS7|25896|integrator complex subunit 7##NM_016448|DTL|51514|denticleless homolog (Drosophila)##AK292343|DTL|51514|denticleless homolog (Drosophila)##AK000742|DTL|51514|denticleless homolog (Drosophila)##AK303346|DTL|51514|denticleless homolog (Drosophila)##BC033540|DTL|51514|denticleless homolog (Drosophila)##AF345896|DTL|51514|denticleless homolog (Drosophila)	0.105511	
chr1	216166102	216166221	reg1020806.p1	5.984	+	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	-425298	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	-909551	+	NM_001017424	-987277	+	AF055580 AY481573 NM_007123 NM_206933	430576	-	HQ692853 AF117255 BC008218 AY388456 AK291647 TSC_hg19_v1_chr1_-_216896791 AB020639 AK290945 BC064700 NM_001243515 NM_001243518 NM_001243519 NM_001438	730565	-	AY388461 NM_001243514	812547	-	BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2##AF055580|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##AY481573|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_007123|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_206933|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##HQ692853|ESRRG|2104|estrogen-related receptor gamma##AF117255|ESRRG|2104|estrogen-related receptor gamma##BC008218|ESRRG|2104|estrogen-related receptor gamma##AY388456|ESRRG|2104|estrogen-related receptor gamma##AK291647|ESRRG|2104|estrogen-related receptor gamma##AB020639|ESRRG|2104|estrogen-related receptor gamma##AK290945|ESRRG|2104|estrogen-related receptor gamma##BC064700|ESRRG|2104|estrogen-related receptor gamma##NM_001243515|ESRRG|2104|estrogen-related receptor gamma##NM_001243518|ESRRG|2104|estrogen-related receptor gamma##NM_001243519|ESRRG|2104|estrogen-related receptor gamma##NM_001438|ESRRG|2104|estrogen-related receptor gamma##AY388461|ESRRG|2104|estrogen-related receptor gamma##NM_001243514|ESRRG|2104|estrogen-related receptor gamma	0.0	
chr1	33684404	33684523	reg1025470.p1	5.984	+	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	-36815	-	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	-137730	+	TSC_hg19_v1_chr1_-_33502485 NM_001199199 NM_001625 NM_013411	-181963	-	TSC_hg19_v1_chr1_+_33722167 NM_152493	37702	+	TSC_hg19_v1_chr1_-_33813262 AK055807	128833	-	BC029269 TSC_hg19_v1_chr1_-_33815374 BC068573 BC092492 BC110863	130906	-	AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##NM_001199199|AK2|204|adenylate kinase 2##NM_001625|AK2|204|adenylate kinase 2##NM_013411|AK2|204|adenylate kinase 2##NM_152493|ZNF362|149076|zinc finger protein 362##BC029269|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC068573|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC092492|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC110863|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	0.833651	CTCF.p2:3:0.834
chr8	52374334	52374505	reg1019928.p3	5.984	+	AJ003030 NM_018967	-1549823	+	NM_001007176 BC017981 AJ276240	-2389510	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-2540509	-	EU170240 AY877349 NM_144651	347534	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	437183	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	437308	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.0	
chrX	10737349	10737483	reg1024212.p2	5.984	+	AF041206 NM_001098624 AK299061	-91660	-	AF230976 AF230977 Y13667 AK226104 AK315095 BC053626 AK291215 TSC_hg19_v1_chrX_-_10588583 AY112901 AK297205 NM_000381 NM_033289	-148851	-	AF035360 NM_001193277 AY112903	-192512	-	NM_033290	114392	-	NM_001122608 NM_001171991 NM_005333 AK097815 TSC_hg19_v1_chrX_+_11129447 CR749578	392014	+	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	392053	+	AF041206|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001098624|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK299061|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF230976|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF230977|MID1|4281|midline 1 (Opitz/BBB syndrome)##Y13667|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK226104|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK315095|MID1|4281|midline 1 (Opitz/BBB syndrome)##BC053626|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK291215|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112901|MID1|4281|midline 1 (Opitz/BBB syndrome)##AK297205|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_000381|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_033289|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112903|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_033290|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001122608|HCCS|3052|holocytochrome c synthase##NM_001171991|HCCS|3052|holocytochrome c synthase##NM_005333|HCCS|3052|holocytochrome c synthase##AK097815|HCCS|3052|holocytochrome c synthase##CR749578|HCCS|3052|holocytochrome c synthase##BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase	0.999438	CTCF.p2:-15:0.999
chr14	24423353	24423481	reg1023274.p1	5.983	+	BC062348 BC080582 TSC_hg19_v1_chr14_-_24423358 BX647964	-66	-	TSC_hg19_v1_chr14_+_24422978 AY616182 DQ344810 NM_021004 AY358638 AF064256 AF044127 AK001870 AK308436 DQ325464 AK314448 AY071856 BC003019 AK301201 DQ338571	-390	+	TSC_hg19_v1_chr14_-_24422882 BX247982	-541	-	NM_001193636 NM_001193637 GQ871924 AY616183 AY920361 AY920362 AY943857 BC041992 NM_001193635 GQ871921 GQ871925 GU564234 GU564235	15781	+	NM_198083 BC101814 BC101812 AK301373 BC000663 BC006125	34655	+	GQ871923 GQ871922 BC171914 BC171918 GQ871926 NM_001082488	82247	+	BC062348|C14orf167|55449|chromosome 14 open reading frame 167##BC080582|C14orf167|55449|chromosome 14 open reading frame 167##BX647964|C14orf167|55449|chromosome 14 open reading frame 167##AY616182|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ344810|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##NM_021004|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY358638|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF064256|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AF044127|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK001870|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK308436|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ325464|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AK314448|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##AY071856|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##BC003019|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##DQ338571|DHRS4|10901|dehydrogenase/reductase (SDR family) member 4##BX247982|C14orf167|55449|chromosome 14 open reading frame 167##NM_001193636|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##NM_001193637|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##GQ871924|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##AY616183|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AY920361|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AY920362|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AY943857|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##NM_001193635|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##GQ871921|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##GU564234|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##GU564235|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##NM_198083|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC101814|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC101812|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##AK301373|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC000663|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##BC006125|DHRS4L2|317749|dehydrogenase/reductase (SDR family) member 4 like 2##GQ871923|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##GQ871922|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##BC171914|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##BC171918|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1##NM_001082488|DHRS4L1|728635|dehydrogenase/reductase (SDR family) member 4 like 1	0.777539	CTCF.p2:2:0.778
chr15	83877026	83877144	reg1024101.p1	5.983	+	BC040554 TSC_hg19_v1_chr15_-_83876823	-289	-	AB529208 TSC_hg19_v1_chr15_-_83876576 BC015483 AB029156 AF110642 AF151900 AK001280 NM_016073	-671	-	BC063487 NM_001144903 NM_023003 AF255922 TSC_hg19_v1_chr15_+_83776396 AK223246 AK292100 BC032007 CU687748 DQ021909 AK295568	-100707	+	TSC_hg19_v1_chr15_-_83952207 AK302992	75117	-	L03427 NM_001717 TSC_hg19_v1_chr15_-_83953480	76393	-	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	238975	+	BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##BC063487|TM6SF1|53346|transmembrane 6 superfamily member 1##NM_001144903|TM6SF1|53346|transmembrane 6 superfamily member 1##NM_023003|TM6SF1|53346|transmembrane 6 superfamily member 1##AF255922|TM6SF1|53346|transmembrane 6 superfamily member 1##AK223246|TM6SF1|53346|transmembrane 6 superfamily member 1##AK292100|TM6SF1|53346|transmembrane 6 superfamily member 1##BC032007|TM6SF1|53346|transmembrane 6 superfamily member 1##DQ021909|TM6SF1|53346|transmembrane 6 superfamily member 1##AK295568|TM6SF1|53346|transmembrane 6 superfamily member 1##AK302992|BNC1|646|basonuclin 1##L03427|BNC1|646|basonuclin 1##NM_001717|BNC1|646|basonuclin 1##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3	0.372085	CTCF.p2:6:0.342
chr7	94285417	94285530	reg1023407.p1	5.983	+	AY359042 TSC_hg19_v1_chr7_-_94285446 AF036364 BC021709 AK313438	-25	-	AB117974 TSC_hg19_v1_chr7_-_94285409 AF516515 CU692388 DQ894063 EU176189	-80	-	AK123866 TSC_hg19_v1_chr7_+_94139376 AK314329 BC050313 AF355594	-146094	+	AJ000534 AK295021 AK298220 TSC_hg19_v1_chr7_-_94285479 NM_001099400 NM_001099401 NM_003919	26	-	TSC_hg19_v1_chr7_+_94285620 NM_001040152 NM_001184961 NM_001184962 NM_015068	158	+	TSC_hg19_v1_chr7_+_94285681 AK299837 NM_001172437 NM_001172438 BC050659	217	+	AY359042|SGCE|8910|sarcoglycan, epsilon##AF036364|SGCE|8910|sarcoglycan, epsilon##BC021709|SGCE|8910|sarcoglycan, epsilon##AK313438|SGCE|8910|sarcoglycan, epsilon##AB117974|SGCE|8910|sarcoglycan, epsilon##AF516515|SGCE|8910|sarcoglycan, epsilon##DQ894063|SGCE|8910|sarcoglycan, epsilon##EU176189|SGCE|8910|sarcoglycan, epsilon##AK123866|CASD1|64921|CAS1 domain containing 1##AK314329|CASD1|64921|CAS1 domain containing 1##BC050313|CASD1|64921|CAS1 domain containing 1##AF355594|CASD1|64921|CAS1 domain containing 1##AJ000534|SGCE|8910|sarcoglycan, epsilon##AK295021|SGCE|8910|sarcoglycan, epsilon##AK298220|SGCE|8910|sarcoglycan, epsilon##NM_001099400|SGCE|8910|sarcoglycan, epsilon##NM_001099401|SGCE|8910|sarcoglycan, epsilon##NM_003919|SGCE|8910|sarcoglycan, epsilon##NM_001040152|PEG10|23089|paternally expressed 10##NM_001184961|PEG10|23089|paternally expressed 10##NM_001184962|PEG10|23089|paternally expressed 10##NM_015068|PEG10|23089|paternally expressed 10##AK299837|PEG10|23089|paternally expressed 10##NM_001172437|PEG10|23089|paternally expressed 10##NM_001172438|PEG10|23089|paternally expressed 10##BC050659|PEG10|23089|paternally expressed 10	0.052191	
chr9	123631494	123631635	reg1020951.p1	5.983	+	AK096706 TSC_hg19_v1_chr9_+_123605361 BX648532 BC028086 BC052374 BC040969	-26190	+	D31889 AB464080 CU677015 DQ892085 DQ895279 BC014478 TSC_hg19_v1_chr9_-_123605201 S79862 AK291051 NM_005047 AK303007	-26339	-	BC000239 TSC_hg19_v1_chr9_-_123555670 BC018738 AK300066 AK314385 AK022484 NM_012164	-75868	-	TSC_hg19_v1_chr9_-_123639471 AK122744 BC022374 AK303433	7914	-	BC108663 NM_001009936 NM_015651 TSC_hg19_v1_chr9_-_123639617	8036	-	AK295959 NM_001190947	45285	-	AK096706|LOC253039|253039|uncharacterized LOC253039##BX648532|LOC253039|253039|uncharacterized LOC253039##BC028086|LOC253039|253039|uncharacterized LOC253039##BC052374|LOC253039|253039|uncharacterized LOC253039##BC040969|LOC253039|253039|uncharacterized LOC253039##D31889|PSMD5|5711|proteasome (prosome, macropain) 26S subunit, non-ATPase, 5##DQ892085|PSMD5|5711|proteasome (prosome, macropain) 26S subunit, non-ATPase, 5##DQ895279|PSMD5|5711|proteasome (prosome, macropain) 26S subunit, non-ATPase, 5##BC014478|PSMD5|5711|proteasome (prosome, macropain) 26S subunit, non-ATPase, 5##S79862|PSMD5|5711|proteasome (prosome, macropain) 26S subunit, non-ATPase, 5##AK291051|PSMD5|5711|proteasome (prosome, macropain) 26S subunit, non-ATPase, 5##NM_005047|PSMD5|5711|proteasome (prosome, macropain) 26S subunit, non-ATPase, 5##AK303007|PSMD5|5711|proteasome (prosome, macropain) 26S subunit, non-ATPase, 5##BC000239|FBXW2|26190|F-box and WD repeat domain containing 2##BC018738|FBXW2|26190|F-box and WD repeat domain containing 2##AK300066|FBXW2|26190|F-box and WD repeat domain containing 2##AK314385|FBXW2|26190|F-box and WD repeat domain containing 2##AK022484|FBXW2|26190|F-box and WD repeat domain containing 2##NM_012164|FBXW2|26190|F-box and WD repeat domain containing 2##AK122744|PHF19|26147|PHD finger protein 19##BC022374|PHF19|26147|PHD finger protein 19##AK303433|PHF19|26147|PHD finger protein 19##BC108663|PHF19|26147|PHD finger protein 19##NM_001009936|PHF19|26147|PHD finger protein 19##NM_015651|PHF19|26147|PHD finger protein 19##AK295959|TRAF1|7185|TNF receptor-associated factor 1##NM_001190947|TRAF1|7185|TNF receptor-associated factor 1	0.0	
chr5	107484473	107484575	reg1023225.p1	5.982	+	AK308672 NM_001962 U26403	-477934	-	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-4586043	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4890067	+	TSC_hg19_v1_chr5_-_107717106 AK126722	232606	-	BC063316 NM_001163315	233274	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	579456	-	AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AB593118|HP07349|100652853|uncharacterized protein HP07349	0.223852	
chr8	37731369	37731549	reg1024396.p1	5.982	+	TSC_hg19_v1_chr8_-_37727937 AK026177	-3509	-	NM_018310 TSC_hg19_v1_chr8_-_37707430 AK294337	-24015	-	TSC_hg19_v1_chr8_-_37707395 AK315420 BC010648 AK001914 AF206673	-24073	-	AY280968 DQ083995 AF368294 DQ236342 BC077720 BC054881 TSC_hg19_v1_chr8_-_37757016 AK291781 AK026275 NM_001002814 NM_025151	25542	-	BC029504 NM_152413	66187	-	S53291 TSC_hg19_v1_chr8_-_37822825	91360	-	AK026177|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_018310|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK294337|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK315420|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##BC010648|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK001914|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AF206673|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AY280968|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ083995|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AF368294|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ236342|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC077720|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC054881|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK291781|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK026275|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_001002814|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_025151|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC029504|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##NM_152413|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##S53291|ADRB3|155|adrenergic, beta-3-, receptor	0.0	
chrX	49684413	49684529	reg1023117.p2	5.982	+	NM_001145073	-40002	+	NM_007003 AK312039 AF275258 AJ005894 AK092503 AX747575	-90544	+	BC004861 AF058989 NM_003785	-223890	-	TSC_hg19_v1_chrX_+_49687274 AK092049 NM_001127898 NM_001127899 AK056560	2775	+	NM_000084 AK308089 TSC_hg19_v1_chrX_+_49832243 AK290940	147774	+	NM_139289 BC033007 BC070150 TSC_hg19_v1_chrX_-_49965024	280542	-	NM_001145073|USP27X|389856|ubiquitin specific peptidase 27, X-linked##NM_007003|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK312039|PAGE4|9506|P antigen family, member 4 (prostate associated)##AF275258|PAGE4|9506|P antigen family, member 4 (prostate associated)##AJ005894|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK092503|PAGE4|9506|P antigen family, member 4 (prostate associated)##BC004861|PAGE1|8712|P antigen family, member 1 (prostate associated)##AF058989|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_003785|PAGE1|8712|P antigen family, member 1 (prostate associated)##AK092049|CLCN5|1184|chloride channel 5##NM_001127898|CLCN5|1184|chloride channel 5##NM_001127899|CLCN5|1184|chloride channel 5##AK056560|CLCN5|1184|chloride channel 5##NM_000084|CLCN5|1184|chloride channel 5##AK308089|CLCN5|1184|chloride channel 5##AK290940|CLCN5|1184|chloride channel 5##NM_139289|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC033007|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC070150|AKAP4|8852|A kinase (PRKA) anchor protein 4	0.551763	CTCF.p2:-4:0.552
chr10	89622083	89622263	reg1023556.p3	5.981	+	TSC_hg19_v1_chr10_-_89577921 AK075223 NM_032810	-44271	-	TSC_hg19_v1_chr10_+_89419623 NM_001015880 NM_004670 BC009894 AK312556 AF091242 AF150754 AF074331 AF173365 DQ893625 DQ895430 AF313907	-202628	+	AK309176 NM_001178118	-354584	+	EU552092 NM_001126049	1020	-	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	1053	+	TSC_hg19_v1_chr10_+_89623380 BC005821	1216	+	AK075223|ATAD1|84896|ATPase family, AAA domain containing 1##NM_032810|ATAD1|84896|ATPase family, AAA domain containing 1##NM_001015880|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##NM_004670|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##BC009894|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK312556|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF091242|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF150754|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF074331|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF173365|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ893625|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ895430|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF313907|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK309176|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178118|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##EU552092|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_001126049|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog	0.012802	
chr22	42947966	42948147	reg1009934.p1	5.981	+	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	-32242	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	-32289	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	-119675	-	BC041802 AK294584 AL450314 NM_014509 AK295223 BC119650 BC119651 BC127635 BC127636 CR456455 AL589866 AL590118 AL590120 CU013005 CU013293	1890	+	AL157851 TSC_hg19_v1_chr22_-_42978018 BC014647 BC007736 BC053540 AK098201 BC143340	29996	-	TSC_hg19_v1_chr22_-_43010884 BC001488 AB385492 AY506562 CU013006 CU013294 CU676456 AK291774 AK303419 AB055760 BC056912 AL137743 BC049840 AL160111 AL160112 AK291623	62807	-	BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##AK294584|SERHL2|253190|serine hydrolase-like 2##AL450314|SERHL2|253190|serine hydrolase-like 2##NM_014509|SERHL2|253190|serine hydrolase-like 2##AK295223|SERHL2|253190|serine hydrolase-like 2##BC119650|SERHL2|253190|serine hydrolase-like 2##BC119651|SERHL2|253190|serine hydrolase-like 2##BC127635|SERHL2|253190|serine hydrolase-like 2##BC127636|SERHL2|253190|serine hydrolase-like 2##CR456455|SERHL2|253190|serine hydrolase-like 2##AL589866|SERHL2|253190|serine hydrolase-like 2##AL590118|SERHL2|253190|serine hydrolase-like 2##AL590120|SERHL2|253190|serine hydrolase-like 2##CU013005|SERHL2|253190|serine hydrolase-like 2##CU013293|SERHL2|253190|serine hydrolase-like 2##AL157851|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC014647|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC007736|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC053540|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##AK098201|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC143340|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC001488|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AY506562|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CU013006|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CU013294|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK291774|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK303419|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AB055760|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##BC056912|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL137743|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##BC049840|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL160111|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL160112|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK291623|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3	0.0	
chr7	100202144	100202242	reg1017129.p1	5.981	+	NM_002593 TSC_hg19_v1_chr7_+_100199985 AK313748 BC000574 L33799 AB008549 AK298364 BC033205 DQ891923 DQ895108	-2214	+	AK302252 NM_001163499 NM_012172 AK301864	-14970	+	TSC_hg19_v1_chr7_+_100183929 AK292240 NM_033506 BC032497 AK310487 AL136811 BC067293 BC051745	-18191	+	NM_001040097 TSC_hg19_v1_chr7_+_100209784	7576	+	TSC_hg19_v1_chr7_+_100210156 NM_001040098 NM_001040099 NM_023948 BC011653 BC009482 BC028475 BC005042	7879	+	TSC_hg19_v1_chr7_-_100230676 AK000421	28508	-	NM_002593|PCOLCE|5118|procollagen C-endopeptidase enhancer##AK313748|PCOLCE|5118|procollagen C-endopeptidase enhancer##BC000574|PCOLCE|5118|procollagen C-endopeptidase enhancer##L33799|PCOLCE|5118|procollagen C-endopeptidase enhancer##AB008549|PCOLCE|5118|procollagen C-endopeptidase enhancer##AK298364|PCOLCE|5118|procollagen C-endopeptidase enhancer##BC033205|PCOLCE|5118|procollagen C-endopeptidase enhancer##DQ891923|PCOLCE|5118|procollagen C-endopeptidase enhancer##DQ895108|PCOLCE|5118|procollagen C-endopeptidase enhancer##AK302252|FBXO24|26261|F-box protein 24##NM_001163499|FBXO24|26261|F-box protein 24##NM_012172|FBXO24|26261|F-box protein 24##AK301864|FBXO24|26261|F-box protein 24##AK292240|FBXO24|26261|F-box protein 24##NM_033506|FBXO24|26261|F-box protein 24##BC032497|FBXO24|26261|F-box protein 24##AK310487|FBXO24|26261|F-box protein 24##AL136811|FBXO24|26261|F-box protein 24##BC067293|FBXO24|26261|F-box protein 24##BC051745|FBXO24|26261|F-box protein 24##NM_001040097|MOSPD3|64598|motile sperm domain containing 3##NM_001040098|MOSPD3|64598|motile sperm domain containing 3##NM_001040099|MOSPD3|64598|motile sperm domain containing 3##NM_023948|MOSPD3|64598|motile sperm domain containing 3##BC011653|MOSPD3|64598|motile sperm domain containing 3##BC009482|MOSPD3|64598|motile sperm domain containing 3##BC028475|MOSPD3|64598|motile sperm domain containing 3##BC005042|MOSPD3|64598|motile sperm domain containing 3##AK000421|TFR2|7036|transferrin receptor 2	0.613473	CTCF.p2:78:0.494
chr7	93003789	93003911	reg1022749.p1	5.981	+	BC017888 NM_017667 NM_024553 TSC_hg19_v1_chr7_+_92861678 AK126478 AL833112 AK055965 AK299582 AB100163 BC108708 BC132740 BC132742 AB058764 BC152424 CU676100 AB385511	-142124	+	TSC_hg19_v1_chr7_-_92855783 AK096002 AK298361 NM_001039372	-148067	-	BC136300 BC136301 BC046365 AY358345 NM_198151 BC139906	-154985	-	AB022178 NM_001164738	185271	-	AB022177 AK313996 NM_001164737 NM_001742	200188	-	CU675117 DQ892533 DQ895744 L27624 AY691946 D29992 AK075427 AK024817 AK075425 AK092499 AK129833 AK313260 BC005330 NM_006528 TSC_hg19_v1_chr7_-_93520066	516179	-	BC017888|CCDC132|55610|coiled-coil domain containing 132##NM_017667|CCDC132|55610|coiled-coil domain containing 132##NM_024553|CCDC132|55610|coiled-coil domain containing 132##AK126478|CCDC132|55610|coiled-coil domain containing 132##AL833112|CCDC132|55610|coiled-coil domain containing 132##AK055965|CCDC132|55610|coiled-coil domain containing 132##AK299582|CCDC132|55610|coiled-coil domain containing 132##AB100163|CCDC132|55610|coiled-coil domain containing 132##BC108708|CCDC132|55610|coiled-coil domain containing 132##BC132740|CCDC132|55610|coiled-coil domain containing 132##BC132742|CCDC132|55610|coiled-coil domain containing 132##AB058764|CCDC132|55610|coiled-coil domain containing 132##BC152424|CCDC132|55610|coiled-coil domain containing 132##AK096002|HEPACAM2|253012|HEPACAM family member 2##AK298361|HEPACAM2|253012|HEPACAM family member 2##NM_001039372|HEPACAM2|253012|HEPACAM family member 2##BC136300|HEPACAM2|253012|HEPACAM family member 2##BC136301|HEPACAM2|253012|HEPACAM family member 2##BC046365|HEPACAM2|253012|HEPACAM family member 2##AY358345|HEPACAM2|253012|HEPACAM family member 2##NM_198151|HEPACAM2|253012|HEPACAM family member 2##BC139906|HEPACAM2|253012|HEPACAM family member 2##AB022178|CALCR|799|calcitonin receptor##NM_001164738|CALCR|799|calcitonin receptor##AB022177|CALCR|799|calcitonin receptor##AK313996|CALCR|799|calcitonin receptor##NM_001164737|CALCR|799|calcitonin receptor##NM_001742|CALCR|799|calcitonin receptor##DQ892533|TFPI2|7980|tissue factor pathway inhibitor 2##DQ895744|TFPI2|7980|tissue factor pathway inhibitor 2##L27624|TFPI2|7980|tissue factor pathway inhibitor 2##AY691946|TFPI2|7980|tissue factor pathway inhibitor 2##D29992|TFPI2|7980|tissue factor pathway inhibitor 2##AK075427|TFPI2|7980|tissue factor pathway inhibitor 2##AK024817|TFPI2|7980|tissue factor pathway inhibitor 2##AK075425|TFPI2|7980|tissue factor pathway inhibitor 2##AK092499|TFPI2|7980|tissue factor pathway inhibitor 2##AK129833|TFPI2|7980|tissue factor pathway inhibitor 2##AK313260|TFPI2|7980|tissue factor pathway inhibitor 2##BC005330|TFPI2|7980|tissue factor pathway inhibitor 2##NM_006528|TFPI2|7980|tissue factor pathway inhibitor 2	0.0	
chr9	99414038	99414157	reg1023966.p1	5.981	+	TSC_hg19_v1_chr9_-_99382126 AF064104 AF064105 NM_003671 NM_033331	-31977	-	TSC_hg19_v1_chr9_-_99329110 AK126388 NM_001077181	-84950	-	TSC_hg19_v1_chr9_+_99212450 NM_014282 BC018788 AF241831 AB463760	-201628	+	TSC_hg19_v1_chr9_-_99417600 BC136501 BC136503 NM_153698	3513	-	AB023189 NM_014930 TSC_hg19_v1_chr9_-_99540352 BC036676 BC068587 BC058022 AK292600	126256	-	BC137073 AK131468 NM_001001662	202289	-	AF064104|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##AF064105|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_003671|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_033331|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_014282|HABP4|22927|hyaluronan binding protein 4##BC018788|HABP4|22927|hyaluronan binding protein 4##AF241831|HABP4|22927|hyaluronan binding protein 4##BC136501|C9orf21|195827|chromosome 9 open reading frame 21##BC136503|C9orf21|195827|chromosome 9 open reading frame 21##NM_153698|C9orf21|195827|chromosome 9 open reading frame 21##AB023189|ZNF510|22869|zinc finger protein 510##NM_014930|ZNF510|22869|zinc finger protein 510##BC036676|ZNF510|22869|zinc finger protein 510##BC068587|ZNF510|22869|zinc finger protein 510##BC058022|ZNF510|22869|zinc finger protein 510##AK292600|ZNF510|22869|zinc finger protein 510##BC137073|ZNF782|158431|zinc finger protein 782##AK131468|ZNF782|158431|zinc finger protein 782##NM_001001662|ZNF782|158431|zinc finger protein 782	0.054824	
chrX	129226304	129226484	reg1022811.p2	5.981	+	NM_021946 TSC_hg19_v1_chrX_+_129139243 AK074089	-87188	+	TSC_hg19_v1_chrX_+_129040144 NM_001166221 NM_006649 AK291918 AK298578 BC009649 BC001149 AK304563 BC014987 AF039694 AB590128 CU679427 DQ892549 DQ895760	-186263	+	TSC_hg19_v1_chrX_-_128977856 AL161962 AK096967 AF151847 AY358558 BC006200 BC012826 BC003128 AK001112 AY952881 NM_016032	-248566	-	TSC_hg19_v1_chrX_-_129244438 U32645	18050	-	TSC_hg19_v1_chrX_-_129244474 NM_001421	18084	-	BC017194 AK314972 NM_001127197 TSC_hg19_v1_chrX_-_129244713	18293	-	NM_021946|BCORL1|63035|BCL6 corepressor-like 1##AK074089|BCORL1|63035|BCL6 corepressor-like 1##NM_001166221|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_006649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK291918|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK298578|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC009649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC001149|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK304563|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC014987|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ892549|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ895760|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9##U32645|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001421|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##BC017194|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##AK314972|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001127197|ELF4|2000|E74-like factor 4 (ets domain transcription factor)	0.035366	
chr1	182752347	182752460	reg1001499.p3	5.980	+	BC069677 BC069718 BC103865 BC103866 BC103867 AF297015 NM_001102450 NM_033345	-110362	-	AF493937 BT006638 CU675307 AB528682 U94829 U70426 BC006243 TSC_hg19_v1_chr1_-_182573525 AK301261 AK311880 NM_002928	-178933	-	CU675308 TSC_hg19_v1_chr1_+_182569465	-182957	+	NM_001200050 NM_001200051 NM_001200052 NM_001200056 NM_030769 BC042003	6181	+	BC034966 AK313225 BC058003 TSC_hg19_v1_chr1_+_182758907 AK297017 AK301068 AY336748	6488	+	TSC_hg19_v1_chr1_+_182808450 NM_001357 AK226102	56054	+	BC069677|RGS8|85397|regulator of G-protein signaling 8##BC069718|RGS8|85397|regulator of G-protein signaling 8##BC103865|RGS8|85397|regulator of G-protein signaling 8##BC103866|RGS8|85397|regulator of G-protein signaling 8##BC103867|RGS8|85397|regulator of G-protein signaling 8##AF297015|RGS8|85397|regulator of G-protein signaling 8##NM_001102450|RGS8|85397|regulator of G-protein signaling 8##NM_033345|RGS8|85397|regulator of G-protein signaling 8##AF493937|RGS16|6004|regulator of G-protein signaling 16##BT006638|RGS16|6004|regulator of G-protein signaling 16##U94829|RGS16|6004|regulator of G-protein signaling 16##U70426|RGS16|6004|regulator of G-protein signaling 16##BC006243|RGS16|6004|regulator of G-protein signaling 16##AK301261|RGS16|6004|regulator of G-protein signaling 16##AK311880|RGS16|6004|regulator of G-protein signaling 16##NM_002928|RGS16|6004|regulator of G-protein signaling 16##NM_001200050|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200051|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200052|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200056|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_030769|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC042003|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC034966|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK313225|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC058003|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK297017|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK301068|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AY336748|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001357|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##AK226102|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9	0.069007	
chr14	88271708	88271830	reg1025340.p1	5.980	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-2272184	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-2275228	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-2275296	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	187694	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	187790	-	NM_001201402	188239	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	0.952307	CTCF.p2:-3:0.952
chr2	232347552	232347679	reg1022131.p1	5.980	+	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	-18380	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	-18480	-	AK001314 TSC_hg19_v1_chr2_-_232326464	-21186	-	BC033054 TSC_hg19_v1_chr2_-_232379076	31467	-	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	47539	-	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	110002	+	BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin##AK001314|NCL|4691|nucleolin##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57	0.99989	CTCF.p2:6:1.000
chr9	140445971	140446057	reg1022206.p2	5.980	+	AK125060 AK126267 TSC_hg19_v1_chr9_-_140444881 NM_001098537 NM_152286	-1104	-	AY255128 AY255129 AY255130 AY255131 AY255132 NM_001130969 NM_001130970 NM_001130971 NM_001178064 NM_015537 TSC_hg19_v1_chr9_-_140353787	-92212	-	TSC_hg19_v1_chr9_-_140353758 AK074602 BC072412	-92254	-	NM_032477 TSC_hg19_v1_chr9_+_140446353 BC040035 AY232291	345	+	CU675946 TSC_hg19_v1_chr9_-_140473350 AK307180 BC003123 BC016349 BC017335	27276	-	TSC_hg19_v1_chr9_-_140473377 AK310987 AK308998 AK075115 NM_138778	27358	-	AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7##AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7##AY255128|NELF|26012|nasal embryonic LHRH factor##AY255129|NELF|26012|nasal embryonic LHRH factor##AY255130|NELF|26012|nasal embryonic LHRH factor##AY255131|NELF|26012|nasal embryonic LHRH factor##AY255132|NELF|26012|nasal embryonic LHRH factor##NM_001130969|NELF|26012|nasal embryonic LHRH factor##NM_001130970|NELF|26012|nasal embryonic LHRH factor##NM_001130971|NELF|26012|nasal embryonic LHRH factor##NM_001178064|NELF|26012|nasal embryonic LHRH factor##NM_015537|NELF|26012|nasal embryonic LHRH factor##AK074602|NELF|26012|nasal embryonic LHRH factor##BC072412|NELF|26012|nasal embryonic LHRH factor##NM_032477|MRPL41|64975|mitochondrial ribosomal protein L41##BC040035|MRPL41|64975|mitochondrial ribosomal protein L41##AY232291|MRPL41|64975|mitochondrial ribosomal protein L41##AK307180|WDR85|92715|WD repeat domain 85##BC003123|WDR85|92715|WD repeat domain 85##BC016349|WDR85|92715|WD repeat domain 85##BC017335|WDR85|92715|WD repeat domain 85##AK310987|WDR85|92715|WD repeat domain 85##AK308998|WDR85|92715|WD repeat domain 85##AK075115|WDR85|92715|WD repeat domain 85##NM_138778|WDR85|92715|WD repeat domain 85	0.11792	
chr1	161135547	161135690	reg1019897.p1	5.978	+	TSC_hg19_v1_chr1_+_161129289 BC090946 AK292319 AK310326 AF233442 AF217979 AF177758	-6273	+	TSC_hg19_v1_chr1_+_161129276 NM_001014443 NM_012475 AB208899	-6360	+	TSC_hg19_v1_chr1_+_161123772 AK311562 AB154405 DQ893161 DQ896457	-11847	+	NM_000309 NM_001122764 BC002357 D38537 U26446 AK094855 AK302298 AK298912	622	+	AK056851 AF038661 BC000276 AF020921 BC006099 TSC_hg19_v1_chr1_-_161147285 BC009985 AK291455 AK092493 AK023311	11649	-	NM_001199873 NM_001199874 NM_003779	12139	-	BC090946|USP21|27005|ubiquitin specific peptidase 21##AK292319|USP21|27005|ubiquitin specific peptidase 21##AK310326|USP21|27005|ubiquitin specific peptidase 21##AF233442|USP21|27005|ubiquitin specific peptidase 21##AF217979|USP21|27005|ubiquitin specific peptidase 21##AF177758|USP21|27005|ubiquitin specific peptidase 21##NM_001014443|USP21|27005|ubiquitin specific peptidase 21##NM_012475|USP21|27005|ubiquitin specific peptidase 21##AB208899|USP21|27005|ubiquitin specific peptidase 21##AB154405|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##DQ893161|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##DQ896457|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##NM_000309|PPOX|5498|protoporphyrinogen oxidase##NM_001122764|PPOX|5498|protoporphyrinogen oxidase##BC002357|PPOX|5498|protoporphyrinogen oxidase##D38537|PPOX|5498|protoporphyrinogen oxidase##U26446|PPOX|5498|protoporphyrinogen oxidase##AK094855|PPOX|5498|protoporphyrinogen oxidase##AK302298|PPOX|5498|protoporphyrinogen oxidase##AK298912|PPOX|5498|protoporphyrinogen oxidase##AK056851|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AF038661|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##BC000276|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##BC006099|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##BC009985|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AK291455|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AK092493|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AK023311|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##NM_001199873|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##NM_001199874|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##NM_003779|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3	0.056358	
chr17	77813625	77813763	reg1021027.p1	5.978	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	-552	-	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-42787	-	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	-61713	+	BC044939 TSC_hg19_v1_chr17_+_77893233	79505	+	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	195908	-	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	196754	+	AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40	1.137246	CTCF.p2:40:0.983
chr18	6543468	6543583	reg1024371.p1	5.978	+	NM_001243517	-32111	+	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	-128610	-	NM_001080209	-651423	-	NM_001010000 BX648684 AK308259 AK302026	290940	+	BC144590 NM_005559 X58531	574259	-	NM_001105581	687611	+	NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001080209|TMEM200C|645369|transmembrane protein 200C##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28##BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1##NM_001105581|LRRC30|339291|leucine rich repeat containing 30	0.999238	CTCF.p2:-13:0.999
chr18	72956438	72956531	reg1024803.p2	5.978	+	TSC_hg19_v1_chr18_+_72922751 NM_005786 AK091155 AX746813	-33739	+	BC018081 NM_175907 TSC_hg19_v1_chr18_-_72921324	-35179	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	-35372	-	TSC_hg19_v1_chr18_+_72998258 AK223545 BC024152	41858	+	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	183138	-	BC108287 TSC_hg19_v1_chr18_-_74092260	1135766	-	NM_005786|TSHZ1|10194|teashirt zinc finger homeobox 1##BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1##BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1##BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##BC108287|ZNF516|9658|zinc finger protein 516	0.207478	CTCF.p2:-9:0.207
chr3	103710432	103710548	reg1022688.p2	5.977	+	AY090780 NM_175056 BC143817	-1556623	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-2142116	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-2163530	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	1375090	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	1375332	+	CR749655 TSC_hg19_v1_chr3_-_105421064	1710564	-	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.813974	CTCF.p2:-3:0.814
chr8	127822252	127822366	reg1022147.p1	5.977	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-251585	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-251754	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-858896	-	DQ486513 NM_001159542	605547	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	926016	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	926181	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.885555	CTCF.p2:17:0.886
chrX	13766078	13766208	reg1021500.p1	5.977	+	TSC_hg19_v1_chrX_+_13752969 BC052809 BC096344 BC096345 BC099658 BC099659 BC092448 GU727634	-13098	+	AK225847 BC042830 TSC_hg19_v1_chrX_+_13752900	-13243	+	TSC_hg19_v1_chrX_+_13752866 NM_003611 AK290354 AK289677 BC012324 BC030787 BC062432 Y15164 Y16355	-13309	+	AM392527 AM392754 AM392867 AM392943 AM392957 AM392968 AM392974 AM393048 AM393215 AM393570 AM393576 AM393741 AM393770 AM393783 AM393822 AB528141 DQ891541 DQ894729 EU832134 EU832227 CU690388 BC008151 TSC_hg19_v1_chrX_-_13835171	68948	-	AK299675 BC047295 TSC_hg19_v1_chrX_-_13835202	69052	-	TSC_hg19_v1_chrX_-_13835213 AK095657	69079	-	BC052809|OFD1|8481|oral-facial-digital syndrome 1##BC096344|OFD1|8481|oral-facial-digital syndrome 1##BC096345|OFD1|8481|oral-facial-digital syndrome 1##BC099658|OFD1|8481|oral-facial-digital syndrome 1##BC099659|OFD1|8481|oral-facial-digital syndrome 1##BC092448|OFD1|8481|oral-facial-digital syndrome 1##GU727634|OFD1|8481|oral-facial-digital syndrome 1##AK225847|OFD1|8481|oral-facial-digital syndrome 1##BC042830|OFD1|8481|oral-facial-digital syndrome 1##NM_003611|OFD1|8481|oral-facial-digital syndrome 1##AK290354|OFD1|8481|oral-facial-digital syndrome 1##AK289677|OFD1|8481|oral-facial-digital syndrome 1##BC012324|OFD1|8481|oral-facial-digital syndrome 1##BC030787|OFD1|8481|oral-facial-digital syndrome 1##BC062432|OFD1|8481|oral-facial-digital syndrome 1##Y15164|OFD1|8481|oral-facial-digital syndrome 1##Y16355|OFD1|8481|oral-facial-digital syndrome 1##AM392527|GPM6B|2824|glycoprotein M6B##AM392754|GPM6B|2824|glycoprotein M6B##AM392867|GPM6B|2824|glycoprotein M6B##AM392943|GPM6B|2824|glycoprotein M6B##AM392957|GPM6B|2824|glycoprotein M6B##AM392968|GPM6B|2824|glycoprotein M6B##AM392974|GPM6B|2824|glycoprotein M6B##AM393048|GPM6B|2824|glycoprotein M6B##AM393215|GPM6B|2824|glycoprotein M6B##AM393570|GPM6B|2824|glycoprotein M6B##AM393576|GPM6B|2824|glycoprotein M6B##AM393741|GPM6B|2824|glycoprotein M6B##AM393770|GPM6B|2824|glycoprotein M6B##AM393783|GPM6B|2824|glycoprotein M6B##AM393822|GPM6B|2824|glycoprotein M6B##DQ891541|GPM6B|2824|glycoprotein M6B##DQ894729|GPM6B|2824|glycoprotein M6B##EU832134|GPM6B|2824|glycoprotein M6B##EU832227|GPM6B|2824|glycoprotein M6B##BC008151|GPM6B|2824|glycoprotein M6B##AK299675|GPM6B|2824|glycoprotein M6B##BC047295|GPM6B|2824|glycoprotein M6B##AK095657|GPM6B|2824|glycoprotein M6B	0.980789	CTCF.p2:21:0.981
chr17	17655461	17655569	reg1022057.p1	5.976	+	TSC_hg19_v1_chr17_+_17608164 AF147359	-47317	+	TSC_hg19_v1_chr17_+_17584772 AB058723 AY172136 NM_030665	-70730	+	TSC_hg19_v1_chr17_-_17495007 CU690728 AF044214 AF113126 BC000557 BC050593 NM_148172 AK302251	-160540	-	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	71389	-	TSC_hg19_v1_chr17_-_17740301 U00968 BC063281	84780	-	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	84809	-	AB058723|RAI1|10743|retinoic acid induced 1##AY172136|RAI1|10743|retinoic acid induced 1##NM_030665|RAI1|10743|retinoic acid induced 1##AF044214|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF113126|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC000557|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC050593|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_148172|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AK302251|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1##U00968|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC063281|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1	0.0	
chr4	38759702	38759882	reg1024856.p1	5.976	+	AF289565 TSC_hg19_v1_chr4_-_38666549	-93303	-	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	-93966	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-780775	+	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	24807	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	46627	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	98636	-	AF289565|FLJ13197|79667|uncharacterized FLJ13197##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6	0.371788	CTCF.p2:26:0.372
chr14	21402442	21402537	reg1021825.p1	5.975	+	TSC_hg19_v1_chr14_+_21359543 NM_002935 X15161 M28128 BC096060 BC096061 BC096062	-42930	+	TSC_hg19_v1_chr14_-_21271004 AK312100 BC022882 BC005324 NM_002933 NM_198234 NM_198235	-131471	-	AK098375 NM_198232	-131942	-	TSC_hg19_v1_chr14_+_21423628 NM_002934 X55988 BC093678 BC093680 M28129 M24157 BC096059 M30510	21159	+	NM_001029991 NM_022734	55475	+	TSC_hg19_v1_chr14_+_21458138 AF321002 AK024512 AK303484 AK304180 AK315999 BC005053 AB590821 CU674975	55657	+	NM_002935|RNASE3|6037|ribonuclease, RNase A family, 3##X15161|RNASE3|6037|ribonuclease, RNase A family, 3##M28128|RNASE3|6037|ribonuclease, RNase A family, 3##BC096060|RNASE3|6037|ribonuclease, RNase A family, 3##BC096061|RNASE3|6037|ribonuclease, RNase A family, 3##BC096062|RNASE3|6037|ribonuclease, RNase A family, 3##AK312100|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC022882|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##BC005324|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_002933|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198234|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198235|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##AK098375|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_198232|RNASE1|6035|ribonuclease, RNase A family, 1 (pancreatic)##NM_002934|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##X55988|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093678|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC093680|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M28129|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M24157|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##BC096059|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##M30510|RNASE2|6036|ribonuclease, RNase A family, 2 (liver, eosinophil-derived neurotoxin)##NM_001029991|METTL17|64745|methyltransferase like 17##NM_022734|METTL17|64745|methyltransferase like 17##AF321002|METTL17|64745|methyltransferase like 17##AK024512|METTL17|64745|methyltransferase like 17##AK303484|METTL17|64745|methyltransferase like 17##AK304180|METTL17|64745|methyltransferase like 17##AK315999|METTL17|64745|methyltransferase like 17##BC005053|METTL17|64745|methyltransferase like 17	0.998724	CTCF.p2:16:0.999
chr21	45577732	45577869	reg1022824.p2	5.975	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-24239	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-24295	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-50501	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	82966	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	83057	-	AF194032 NM_013369 NM_175867	104298	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr8	124031269	124031397	reg1025614.p1	5.975	+	TSC_hg19_v1_chr8_+_123963651 EU446694 AB083653	-67634	+	TSC_hg19_v1_chr8_+_123794108 AB020661	-237230	+	BC042145 TSC_hg19_v1_chr8_+_123794000	-237339	+	BC002457 TSC_hg19_v1_chr8_-_124054522	23174	-	AY358818 TSC_hg19_v1_chr8_-_124054540 AK303826	23207	-	TSC_hg19_v1_chr8_-_124054594 NM_001134671 NM_024295	23286	-	EU446694|ZHX2|22882|zinc fingers and homeoboxes 2##AB083653|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##BC002457|DERL1|79139|Der1-like domain family, member 1##AY358818|DERL1|79139|Der1-like domain family, member 1##AK303826|DERL1|79139|Der1-like domain family, member 1##NM_001134671|DERL1|79139|Der1-like domain family, member 1##NM_024295|DERL1|79139|Der1-like domain family, member 1	0.110818	
chr8	35453095	35453209	reg1022892.p1	5.975	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-360165	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-1995657	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	-1995693	-	NM_001031836 AK302391 BC028701	1188718	+	TSC_hg19_v1_chr8_-_37457377 AK025743	2004216	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	2100165	+	AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703	0.691929	CTCF.p2:3:0.692
chrX	55934531	55934697	reg1023247.p1	5.975	+	TSC_hg19_v1_chrX_+_55744181 NM_006064 NM_016656 AL831926 AK289407 BC034726 X90530	-190426	+	BC012934 NM_198451	-284782	+	NM_201286 BC035907	-418982	-	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	324296	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	655437	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	821077	+	NM_006064|RRAGB|10325|Ras-related GTP binding B##NM_016656|RRAGB|10325|Ras-related GTP binding B##AL831926|RRAGB|10325|Ras-related GTP binding B##AK289407|RRAGB|10325|Ras-related GTP binding B##BC034726|RRAGB|10325|Ras-related GTP binding B##X90530|RRAGB|10325|Ras-related GTP binding B##BC012934|FOXR2|139628|forkhead box R2##NM_198451|FOXR2|139628|forkhead box R2##NM_201286|USP51|158880|ubiquitin specific peptidase 51##BC035907|USP51|158880|ubiquitin specific peptidase 51##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643	0.930391	CTCF.p2:3:0.930
chr11	116476404	116476537	reg1027412.p1	5.974	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-1101290	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-1387822	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1927222	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	167228	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	182245	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	182268	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.703482	CTCF.p2:4:0.703
chr1	170899013	170899132	reg1022039.p1	5.974	+	BC074993 NM_006902 NM_022716 EU446648 AB527492 AB451463 TSC_hg19_v1_chr1_+_170633380 M95929	-265710	+	TSC_hg19_v1_chr1_+_170632302 AK225968	-266782	+	TSC_hg19_v1_chr1_+_170501309 AK308339 NM_001146039 NM_152281 AK021814 BC064945 CU687974 BC047476 AK057661	-397769	+	NM_001163629 NM_025063 AK027203 BC113390 BC113392	5575	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	160969	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	255350	+	BC074993|PRRX1|5396|paired related homeobox 1##NM_006902|PRRX1|5396|paired related homeobox 1##NM_022716|PRRX1|5396|paired related homeobox 1##EU446648|PRRX1|5396|paired related homeobox 1##AB451463|PRRX1|5396|paired related homeobox 1##AK225968|PRRX1|5396|paired related homeobox 1##AK308339|GORAB|92344|golgin, RAB6-interacting##NM_001146039|GORAB|92344|golgin, RAB6-interacting##NM_152281|GORAB|92344|golgin, RAB6-interacting##AK021814|GORAB|92344|golgin, RAB6-interacting##BC064945|GORAB|92344|golgin, RAB6-interacting##BC047476|GORAB|92344|golgin, RAB6-interacting##AK057661|GORAB|92344|golgin, RAB6-interacting##NM_001163629|C1orf129|80133|chromosome 1 open reading frame 129##NM_025063|C1orf129|80133|chromosome 1 open reading frame 129##AK027203|C1orf129|80133|chromosome 1 open reading frame 129##BC113390|C1orf129|80133|chromosome 1 open reading frame 129##BC113392|C1orf129|80133|chromosome 1 open reading frame 129##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)	0.818507	CTCF.p2:20:0.819
chr2	201440821	201440956	reg1024146.p2	5.974	+	TSC_hg19_v1_chr2_+_201390929 NM_001160033 NM_001160046 NM_152524 AK095291 BC048349 BC110583 BX647433 AK302457 BC092412 AY094614	-49986	+	TSC_hg19_v1_chr2_-_201374792 BC059366 BC045189 AK290867 BC067755 AK055884 NM_152387	-66056	-	TSC_hg19_v1_chr2_+_201171424 AF193059 BC065817	-269439	+	TSC_hg19_v1_chr2_+_201450590 AK301052	9699	+	AB046692 NM_001159 TSC_hg19_v1_chr2_+_201450748 BC117179 BC117181	9896	+	AK297930 AK307738 TSC_hg19_v1_chr2_+_201474048	33109	+	NM_001160033|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_001160046|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_152524|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK095291|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC048349|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC110583|SGOL2|151246|shugoshin-like 2 (S. pombe)##BX647433|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK302457|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC092412|SGOL2|151246|shugoshin-like 2 (S. pombe)##AY094614|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC059366|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC045189|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK290867|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC067755|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK055884|KCTD18|130535|potassium channel tetramerisation domain containing 18##NM_152387|KCTD18|130535|potassium channel tetramerisation domain containing 18##AF193059|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC065817|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK301052|AOX1|316|aldehyde oxidase 1##AB046692|AOX1|316|aldehyde oxidase 1##NM_001159|AOX1|316|aldehyde oxidase 1##BC117179|AOX1|316|aldehyde oxidase 1##BC117181|AOX1|316|aldehyde oxidase 1##AK297930|AOX1|316|aldehyde oxidase 1##AK307738|AOX1|316|aldehyde oxidase 1	0.9997	CTCF.p2:-10:1.000
chr3	59411724	59411858	reg1023039.p1	5.974	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-376031	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-376050	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-376083	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	1825299	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	2135420	+	BC047734 TSC_hg19_v1_chr3_+_61547294	2135495	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.0	
chr8	56884832	56884980	reg1027311.p1	5.974	+	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-92386	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	-92511	+	TSC_hg19_v1_chr8_+_56792383 M16038 NM_001111097 NM_002350 BC126456 BC126458	-92541	+	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	102180	-	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	141634	-	TSC_hg19_v1_chr8_-_57123833 U65002	238929	-	AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M16038|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_001111097|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_002350|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126456|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126458|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1	0.941997	CTCF.p2:-12:0.942
chr9	139588785	139588887	reg1022960.p2	5.974	+	TSC_hg19_v1_chr9_-_139581926 NM_001012727 NM_006412	-6921	-	AF011374 TSC_hg19_v1_chr9_-_139581883 AF000237	-6959	-	TSC_hg19_v1_chr9_-_139581856 BC004529 BC019292 U56418 BC000026	-6997	-	TSC_hg19_v1_chr9_+_139607008 NM_152421 BC032097 CU689268	18180	+	BC061888 TSC_hg19_v1_chr9_-_139622638 BC055011 BC059956 AK054908 AK090585 BC042369 BC042667	33787	-	AY301271 BC133045 BC144440 BC144441 BC171741 NM_001001712	48546	-	NM_001012727|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##NM_006412|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##AF011374|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##AF000237|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##BC004529|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##BC019292|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##U56418|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##BC000026|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##NM_152421|FAM69B|138311|family with sequence similarity 69, member B##BC032097|FAM69B|138311|family with sequence similarity 69, member B##BC061888|SNHG7|84973|small nucleolar RNA host gene 7 (non-protein coding)##BC055011|SNHG7|84973|small nucleolar RNA host gene 7 (non-protein coding)##BC059956|SNHG7|84973|small nucleolar RNA host gene 7 (non-protein coding)##AK054908|SNORA43|677824|small nucleolar RNA, H/ACA box 43##AK090585|SNHG7|84973|small nucleolar RNA host gene 7 (non-protein coding)##BC042369|SNHG7|84973|small nucleolar RNA host gene 7 (non-protein coding)##BC042667|SNHG7|84973|small nucleolar RNA host gene 7 (non-protein coding)##AY301271|LCN10|414332|lipocalin 10##BC133045|LCN10|414332|lipocalin 10##BC144440|LCN10|414332|lipocalin 10##BC144441|LCN10|414332|lipocalin 10##BC171741|LCN10|414332|lipocalin 10##NM_001001712|LCN10|414332|lipocalin 10	0.999774	CTCF.p2:-5:1.000
chr1	203311738	203311878	reg1023896.p1	5.973	+	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	-37119	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-112993	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-155882	-	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	5576	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	8401	-	AK172740 TSC_hg19_v1_chr1_-_203320256	8453	-	NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.0	
chr15	88787849	88787957	reg1023486.p2	5.973	+	NM_152336	-2102662	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-2449708	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-2449806	-	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	12063	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	222725	-	AB049944 NM_022839 NM_176805	222780	+	NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11	0.99804	CTCF.p2:-4:0.998
chr17	46578611	46578734	reg1022711.p1	5.973	+	TSC_hg19_v1_chr17_-_46507604 BC039040	-71055	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	-71134	-	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-393520	+	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	29599	-	EU446481 BC074805 BC074806 X16665 NM_002145	43661	-	NM_002146 AK027609	73156	-	BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1##EU446481|HOXB2|3212|homeobox B2##BC074805|HOXB2|3212|homeobox B2##BC074806|HOXB2|3212|homeobox B2##X16665|HOXB2|3212|homeobox B2##NM_002145|HOXB2|3212|homeobox B2##NM_002146|HOXB3|3213|homeobox B3##AK027609|HOXB3|3213|homeobox B3	0.037022	
chr8	37707377	37707557	reg1022913.p1	5.973	+	NM_018310 TSC_hg19_v1_chr8_-_37707430 AK294337	-23	-	TSC_hg19_v1_chr8_-_37707395 AK315420 BC010648 AK001914 AF206673	-81	-	AB463449 CU679783 EU446514 AF298153 TSC_hg19_v1_chr8_-_37707359	-138	-	TSC_hg19_v1_chr8_-_37727937 AK026177	20483	-	AY280968 DQ083995 AF368294 DQ236342 BC077720 BC054881 TSC_hg19_v1_chr8_-_37757016 AK291781 AK026275 NM_001002814 NM_025151	49534	-	BC029504 NM_152413	90179	-	NM_018310|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK294337|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK315420|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##BC010648|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK001914|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AF206673|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##EU446514|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AF298153|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK026177|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AY280968|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ083995|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AF368294|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ236342|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC077720|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC054881|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK291781|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK026275|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_001002814|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_025151|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC029504|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##NM_152413|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1	0.338631	CTCF.p2:-15:0.339
chr17	49938435	49938578	reg1024514.p1	5.972	+	AF151806 TSC_hg19_v1_chr17_+_49337913 AK314399 BC025276 BC001535	-600581	+	TSC_hg19_v1_chr17_+_49337906 NM_016001	-600607	+	TSC_hg19_v1_chr17_+_49337888 AK026355	-600620	+	TSC_hg19_v1_chr17_-_50235676 AK294652 AK313001	297182	-	TSC_hg19_v1_chr17_-_50236075 BC047456 BC068462	297534	-	CR936674 TSC_hg19_v1_chr17_-_50236127 NM_020178	297632	-	AF151806|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK314399|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC025276|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC001535|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##NM_016001|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK026355|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK294652|CA10|56934|carbonic anhydrase X##AK313001|CA10|56934|carbonic anhydrase X##BC047456|CA10|56934|carbonic anhydrase X##BC068462|CA10|56934|carbonic anhydrase X##NM_020178|CA10|56934|carbonic anhydrase X	0.996131	CTCF.p2:-4:0.996
chr17	26940391	26940538	reg1026342.p1	5.971	+	TSC_hg19_v1_chr17_-_26926044 AK292398 NM_006461	-14407	-	BC000322 TSC_hg19_v1_chr17_-_26926034 AF399910 AF063308	-14438	-	TSC_hg19_v1_chr17_-_26903929 NM_005165	-36526	-	AB528909 BC045622 AK316079 AK057735 NM_001174103 AK294189	732	-	AB384436 TSC_hg19_v1_chr17_-_26972133 BC048096 CR933634 AK130007	31642	-	TSC_hg19_v1_chr17_-_26972141 D43947	31682	-	AK292398|SPAG5|10615|sperm associated antigen 5##NM_006461|SPAG5|10615|sperm associated antigen 5##BC000322|SPAG5|10615|sperm associated antigen 5##AF399910|SPAG5|10615|sperm associated antigen 5##AF063308|SPAG5|10615|sperm associated antigen 5##NM_005165|ALDOC|230|aldolase C, fructose-bisphosphate##BC045622|SGK494|124923|uncharacterized serine/threonine-protein kinase SgK494##AK316079|SGK494|124923|uncharacterized serine/threonine-protein kinase SgK494##AK057735|SGK494|124923|uncharacterized serine/threonine-protein kinase SgK494##NM_001174103|SGK494|124923|uncharacterized serine/threonine-protein kinase SgK494##AK294189|SGK494|124923|uncharacterized serine/threonine-protein kinase SgK494##BC048096|KIAA0100|9703|KIAA0100##CR933634|KIAA0100|9703|KIAA0100##AK130007|KIAA0100|9703|KIAA0100##D43947|KIAA0100|9703|KIAA0100	0.701739	CTCF.p2:13:0.702
chr20	19997817	19997934	reg1020629.p1	5.971	+	TSC_hg19_v1_chr20_+_19955789 M37190	-42016	+	TSC_hg19_v1_chr20_+_19915762 BC034698 AL136924	-82126	+	BC128065 NM_018993 TSC_hg19_v1_chr20_+_19870217 AB060339	-127648	+	TSC_hg19_v1_chr20_+_19997934 NM_016100 NM_181528	58	+	TSC_hg19_v1_chr20_+_19997975 AF085355 AK311819 BC008446	94	+	TSC_hg19_v1_chr20_+_19998005 AL136641 BC005181	124	+	M37190|RIN2|54453|Ras and Rab interactor 2##BC034698|RIN2|54453|Ras and Rab interactor 2##AL136924|RIN2|54453|Ras and Rab interactor 2##BC128065|RIN2|54453|Ras and Rab interactor 2##NM_018993|RIN2|54453|Ras and Rab interactor 2##AB060339|RIN2|54453|Ras and Rab interactor 2##NM_016100|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##NM_181528|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##AF085355|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##AK311819|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##BC008446|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##AL136641|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##BC005181|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit	0.059102	
chr2	225314278	225314378	reg1021699.p2	5.971	+	BC025754 NM_001122779 NM_024785 AK026399	-47598	-	TSC_hg19_v1_chr2_-_224904004 BC015663 AK225823 AK297588 AK312499 NM_001136528 NM_006216	-410158	-	AK295564 NM_001136530	-410988	-	AF052147 BC031844 TSC_hg19_v1_chr2_-_225370764	56400	-	U58089 TSC_hg19_v1_chr2_-_225378353	64008	-	AK299644 AK291151 AF064087 AF062537 TSC_hg19_v1_chr2_-_225449842	135455	-	BC025754|FAM124B|79843|family with sequence similarity 124B##NM_001122779|FAM124B|79843|family with sequence similarity 124B##NM_024785|FAM124B|79843|family with sequence similarity 124B##AK026399|FAM124B|79843|family with sequence similarity 124B##BC015663|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK225823|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK297588|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK312499|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136528|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_006216|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AF052147|CUL3|8452|cullin 3##BC031844|CUL3|8452|cullin 3##U58089|CUL3|8452|cullin 3##AK299644|CUL3|8452|cullin 3##AK291151|CUL3|8452|cullin 3##AF064087|CUL3|8452|cullin 3##AF062537|CUL3|8452|cullin 3	0.931874	CTCF.p2:-1:0.932
chr11	118797104	118797285	reg1022423.p2	5.970	+	AB094091 NM_182557	-15582	-	NM_032966 X68829	-33094	+	AK291512 NM_001716 BC110352 X68149 AB464488	-42634	+	NM_006760 Y13645 BC113900 AY455312 AB009454	29869	+	AB094092 NM_181721 BC028191 BC125040 BC038969	45284	+	TSC_hg19_v1_chr11_+_118868847 AB094093 NM_198489	71655	+	AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_006760|UPK2|7379|uroplakin 2##Y13645|UPK2|7379|uroplakin 2##BC113900|UPK2|7379|uroplakin 2##AY455312|UPK2|7379|uroplakin 2##AB009454|UPK2|7379|uroplakin 2##AB094092|FOXR1|283150|forkhead box R1##NM_181721|FOXR1|283150|forkhead box R1##BC028191|FOXR1|283150|forkhead box R1##BC125040|FOXR1|283150|forkhead box R1##BC038969|FOXR1|283150|forkhead box R1##AB094093|CCDC84|338657|coiled-coil domain containing 84##NM_198489|CCDC84|338657|coiled-coil domain containing 84	0.0	
chr13	93225819	93225926	reg1020401.p1	5.970	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-1174968	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-4901003	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-6852433	-	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	653555	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	1905954	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	2022557	-	BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase	0.222113	CTCF.p2:-8:0.222
chr16	53926148	53926265	reg1023402.p2	5.970	+	TSC_hg19_v1_chr16_+_53738067 AK096554 AB051539 AK295196	-188138	+	NM_001080432	-188332	+	TSC_hg19_v1_chr16_-_53737760 BC136433 AK096333 AK308390 BC017977 CR749645 AK307929 EF565106 NM_001127897 NM_015272 AK304790	-188449	-	BC034328 TSC_hg19_v1_chr16_-_54319025	392758	-	TSC_hg19_v1_chr16_+_54319531 AK309303	393315	+	DQ892008 EU176666 TSC_hg19_v1_chr16_-_54320043	393800	-	AK096554|FTO|79068|fat mass and obesity associated##AB051539|FTO|79068|fat mass and obesity associated##AK295196|FTO|79068|fat mass and obesity associated##NM_001080432|FTO|79068|fat mass and obesity associated##BC136433|RPGRIP1L|23322|RPGRIP1-like##AK096333|RPGRIP1L|23322|RPGRIP1-like##AK308390|RPGRIP1L|23322|RPGRIP1-like##BC017977|RPGRIP1L|23322|RPGRIP1-like##CR749645|RPGRIP1L|23322|RPGRIP1-like##AK307929|RPGRIP1L|23322|RPGRIP1-like##EF565106|RPGRIP1L|23322|RPGRIP1-like##NM_001127897|RPGRIP1L|23322|RPGRIP1-like##NM_015272|RPGRIP1L|23322|RPGRIP1-like##AK304790|RPGRIP1L|23322|RPGRIP1-like##BC034328|IRX3|79191|iroquois homeobox 3##DQ892008|IRX3|79191|iroquois homeobox 3##EU176666|IRX3|79191|iroquois homeobox 3	0.28744	CTCF.p2:-33:0.287
chr14	55896967	55897096	reg1024402.p1	5.969	+	BC028015 AB587548 AK292810 TSC_hg19_v1_chr14_-_55878549 BC109089 BC109090 AK131251 NM_014924	-18475	-	NM_152231	-158160	+	TSC_hg19_v1_chr14_+_55738114 BX248268 BC095482	-158873	+	AY457923 HQ258397 NM_199047 DQ448593 BC117185 BC117159	10266	-	BX248296 TSC_hg19_v1_chr14_-_56046835 AK124927	149785	-	TSC_hg19_v1_chr14_+_56046963 NM_001079521 NM_001079522 NM_004986 NM_182926 BC066337 D13629 AK302797 BC050555 BC058736 Z22551 AY264265 BC112337	150071	+	BC028015|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##AK292810|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##BC109089|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##BC109090|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##AK131251|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##NM_014924|ATG14|22863|ATG14 autophagy related 14 homolog (S. cerevisiae)##NM_152231|FBXO34|55030|F-box protein 34##BX248268|FBXO34|55030|F-box protein 34##BC095482|FBXO34|55030|F-box protein 34##AY457923|TBPL2|387332|TATA box binding protein like 2##HQ258397|TBPL2|387332|TATA box binding protein like 2##NM_199047|TBPL2|387332|TATA box binding protein like 2##DQ448593|TBPL2|387332|TATA box binding protein like 2##BC117185|TBPL2|387332|TATA box binding protein like 2##BC117159|TBPL2|387332|TATA box binding protein like 2##BX248296|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##AK124927|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##NM_001079521|KTN1|3895|kinectin 1 (kinesin receptor)##NM_001079522|KTN1|3895|kinectin 1 (kinesin receptor)##NM_004986|KTN1|3895|kinectin 1 (kinesin receptor)##NM_182926|KTN1|3895|kinectin 1 (kinesin receptor)##BC066337|KTN1|3895|kinectin 1 (kinesin receptor)##D13629|KTN1|3895|kinectin 1 (kinesin receptor)##AK302797|KTN1|3895|kinectin 1 (kinesin receptor)##BC050555|KTN1|3895|kinectin 1 (kinesin receptor)##BC058736|KTN1|3895|kinectin 1 (kinesin receptor)##Z22551|KTN1|3895|kinectin 1 (kinesin receptor)##AY264265|KTN1|3895|kinectin 1 (kinesin receptor)##BC112337|KTN1|3895|kinectin 1 (kinesin receptor)	0.356627	CTCF.p2:20:0.357
chr17	27243504	27243614	reg1023532.p1	5.969	+	TSC_hg19_v1_chr17_-_27240983 AK024290	-2546	-	AX795344 TSC_hg19_v1_chr17_-_27229986 AX795345 AX795340 AX795338 AX795342 BC015582 AX795337 AX795341 AX795339 AX795335 AX795336 AK296017 AX795346 AX795343 AY358566 NM_144683	-13554	-	TSC_hg19_v1_chr17_-_27224717 NM_004475	-18847	-	BC110882 TSC_hg19_v1_chr17_-_27278336	34771	-	TSC_hg19_v1_chr17_-_27278483 AY030283 NM_001033561 NM_020889	34937	-	AB527210 TSC_hg19_v1_chr17_-_27333044 AK125377 AK223620 AY038048 NM_001098635 NM_178860 AF502129 AF502130	89466	-	AK024290|PHF12|57649|PHD finger protein 12##BC015582|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AK296017|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AY358566|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##NM_144683|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##NM_004475|FLOT2|2319|flotillin 2##BC110882|PHF12|57649|PHD finger protein 12##AY030283|PHF12|57649|PHD finger protein 12##NM_001033561|PHF12|57649|PHD finger protein 12##NM_020889|PHF12|57649|PHD finger protein 12##AK125377|SEZ6|124925|seizure related 6 homolog (mouse)##AK223620|SEZ6|124925|seizure related 6 homolog (mouse)##AY038048|SEZ6|124925|seizure related 6 homolog (mouse)##NM_001098635|SEZ6|124925|seizure related 6 homolog (mouse)##NM_178860|SEZ6|124925|seizure related 6 homolog (mouse)##AF502129|SEZ6|124925|seizure related 6 homolog (mouse)##AF502130|SEZ6|124925|seizure related 6 homolog (mouse)	0.9899	CTCF.p2:-12:0.990
chr18	53189365	53189497	reg1024542.p2	5.969	+	AK096862 NM_001243231	-11432	-	AK300612 NM_001243233	-99709	-	AK095041 NM_001243232	-118206	-	TSC_hg19_v1_chr18_-_53255424 M74719	65989	-	FR748206 FR748216 TSC_hg19_v1_chr18_-_53255849 AK122765 NM_001083962 NM_001243230 NM_003199	66366	-	AK315074 AK299169 NM_001243227 NM_001243228	67607	-	AK096862|TCF4|6925|transcription factor 4##NM_001243231|TCF4|6925|transcription factor 4##AK300612|TCF4|6925|transcription factor 4##NM_001243233|TCF4|6925|transcription factor 4##AK095041|TCF4|6925|transcription factor 4##NM_001243232|TCF4|6925|transcription factor 4##M74719|TCF4|6925|transcription factor 4##FR748216|TCF4|6925|transcription factor 4##AK122765|TCF4|6925|transcription factor 4##NM_001083962|TCF4|6925|transcription factor 4##NM_001243230|TCF4|6925|transcription factor 4##NM_003199|TCF4|6925|transcription factor 4##AK315074|TCF4|6925|transcription factor 4##AK299169|TCF4|6925|transcription factor 4##NM_001243227|TCF4|6925|transcription factor 4##NM_001243228|TCF4|6925|transcription factor 4	0.190408	
chr2	103370157	103370303	reg1024140.p2	5.969	+	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	-16848	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	-16897	-	BC136377 BC136378 BC035787 NM_003048 AF073299	-134047	+	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	8352	+	TSC_hg19_v1_chr2_-_105467912 AK096498	2097686	-	TSC_hg19_v1_chr2_+_105471877 NM_006236	2101668	+	AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##BC136377|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC136378|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC035787|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##NM_003048|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AF073299|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##NM_006236|POU3F3|5455|POU class 3 homeobox 3	0.999947	CTCF.p2:-17:1.000
chr4	126204986	126205089	reg1022366.p1	5.969	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	-571223	-	AK026960 BC063856 NM_005841	-1884364	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-1887081	+	NM_024582	32529	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	2349102	+	TSC_hg19_v1_chr4_+_128651573 NM_031291 AL136857 AY550240 BC022032 AB528294 AM393262 CU692468 AJ863129	2446572	+	AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##NM_031291|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AL136857|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AY550240|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC022032|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AM393262|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AJ863129|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31	0.921905	CTCF.p2:20:0.922
chr9	96764935	96765089	reg1024522.p1	5.969	+	TSC_hg19_v1_chr9_-_96717638 BC064363	-47373	-	TSC_hg19_v1_chr9_-_96717589 AF213356 NM_021570	-47430	-	TSC_hg19_v1_chr9_+_96339042 NM_005392 BC064613 AB014562 BC152437 AL834263	-426089	+	TSC_hg19_v1_chr9_+_96793094 AY171233 NM_177995 BC067120 NM_001253830 BC051654	28103	+	NM_001253829 NM_152422 TSC_hg19_v1_chr9_+_96846745 BC031279 AK310403 AK289692	81739	+	TSC_hg19_v1_chr9_+_96846806 AK124912	81802	+	BC064363|BARX1|56033|BARX homeobox 1##AF213356|BARX1|56033|BARX homeobox 1##NM_021570|BARX1|56033|BARX homeobox 1##NM_005392|PHF2|5253|PHD finger protein 2##BC064613|PHF2|5253|PHD finger protein 2##AB014562|PHF2|5253|PHD finger protein 2##BC152437|PHF2|5253|PHD finger protein 2##AL834263|PHF2|5253|PHD finger protein 2##AY171233|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_177995|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC067120|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253830|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC051654|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253829|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_152422|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC031279|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK310403|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK289692|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK124912|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	1.037735	CTCF.p2:15:0.997
chr16	28857797	28857950	reg1022922.p2	5.968	+	TSC_hg19_v1_chr16_-_28857657 BC010041 S75463 NM_003321	-191	-	L38995 X84694 CU674798 TSC_hg19_v1_chr16_-_28857620 BC001633	-262	-	TSC_hg19_v1_chr16_+_28834574 BC082760 U70671	-23222	+	AK055104 TSC_hg19_v1_chr16_+_28858064	163	+	TSC_hg19_v1_chr16_+_28874866 AK298569	16994	+	NM_001145795 NM_001145796 NM_001145797 TSC_hg19_v1_chr16_+_28875160 AK297080	17246	+	BC010041|TUFM|7284|Tu translation elongation factor, mitochondrial##S75463|TUFM|7284|Tu translation elongation factor, mitochondrial##NM_003321|TUFM|7284|Tu translation elongation factor, mitochondrial##L38995|TUFM|7284|Tu translation elongation factor, mitochondrial##X84694|TUFM|7284|Tu translation elongation factor, mitochondrial##BC001633|TUFM|7284|Tu translation elongation factor, mitochondrial##BC082760|ATXN2L|11273|ataxin 2-like##U70671|ATXN2L|11273|ataxin 2-like##AK055104|SH2B1|25970|SH2B adaptor protein 1##AK298569|SH2B1|25970|SH2B adaptor protein 1##NM_001145795|SH2B1|25970|SH2B adaptor protein 1##NM_001145796|SH2B1|25970|SH2B adaptor protein 1##NM_001145797|SH2B1|25970|SH2B adaptor protein 1##AK297080|SH2B1|25970|SH2B adaptor protein 1	0.070056	
chr2	110550379	110550493	reg1024588.p1	5.968	+	AL136868 NM_001037866 NM_001123363 NM_032260	-102	+	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	-178491	+	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	-178711	-	NM_005054 U64675	1529	+	BC094740 NM_001205288 NM_033514	105572	+	U17077 AB590150 DQ892870 DQ896118 TSC_hg19_v1_chr2_-_110873397 BC003179	322969	-	AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##U17077|MALL|7851|mal, T-cell differentiation protein-like##DQ892870|MALL|7851|mal, T-cell differentiation protein-like##DQ896118|MALL|7851|mal, T-cell differentiation protein-like##BC003179|MALL|7851|mal, T-cell differentiation protein-like	0.58281	CTCF.p2:14:0.583
chr2	68412823	68412935	reg1022799.p2	5.968	+	TSC_hg19_v1_chr2_+_68384999 BC008304 NM_020143 AK291715 AF349314 AF164799 AK313204 AK223118 L48692 AK225641 BC018152	-27782	+	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	-28245	-	NM_001190263 NM_001190265 NM_006333 NM_173177 TSC_hg19_v1_chr2_-_68290160	-122719	-	TSC_hg19_v1_chr2_-_68479665 AK307136 AK314893 BC027913 NM_000945	66716	-	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	134221	-	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	179493	+	BC008304|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_020143|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK291715|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF349314|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF164799|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK313204|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK223118|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK225641|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##BC018152|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92##NM_001190263|C1D|10438|C1D nuclear receptor corepressor##NM_001190265|C1D|10438|C1D nuclear receptor corepressor##NM_006333|C1D|10438|C1D nuclear receptor corepressor##NM_173177|C1D|10438|C1D nuclear receptor corepressor##AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin	0.953095	CTCF.p2:4:0.953
chr5	14685942	14686054	reg1021472.p1	5.968	+	TSC_hg19_v1_chr5_+_14664826 BC015392	-21157	+	TSC_hg19_v1_chr5_+_14664772 NM_138348	-21222	+	AK123396 TSC_hg19_v1_chr5_-_14664742	-21271	-	DQ892588 DQ895806 AK222631 AK315012 BC014526 AF274753 AY358503 TSC_hg19_v1_chr5_-_14871888 AL833238 AB046801 BC009835 NM_054027	185857	-	TSC_hg19_v1_chr5_+_15500291 AB020647 NM_012304	814301	+	BC136424 TSC_hg19_v1_chr5_+_15500549	814546	+	BC015392|FAM105B|90268|family with sequence similarity 105, member B##NM_138348|FAM105B|90268|family with sequence similarity 105, member B##AK123396|LOC728178|728178|uncharacterized LOC728178##DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)##DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)##AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)##AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)##BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)##AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)##AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)##AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)##BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)##NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)##AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7	0.058036	
chr11	29454383	29454520	reg1022823.p1	5.967	+	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-1322598	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-1324573	+	TSC_hg19_v1_chr11_-_28129704 BC026090 NM_031217	-1324728	-	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	584080	-	NM_000510 NM_001018080	798111	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	890201	+	BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##BC026090|KIF18A|81930|kinesin family member 18A##NM_031217|KIF18A|81930|kinesin family member 18A##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46	0.998781	CTCF.p2:13:0.999
chr12	13136497	13136644	reg1024581.p1	5.967	+	AB099817 AF209923 BC069341 BC107077 BC107078 NM_018654	-33253	-	TSC_hg19_v1_chr12_+_13044495 AF506289 AF095448 BC003665 AK291171	-92045	+	AK001761 TSC_hg19_v1_chr12_+_13044469	-92159	+	AF167473 BT007294 DQ892338 DQ895543 BC016277 AF117615 TSC_hg19_v1_chr12_-_13153173	16540	-	TSC_hg19_v1_chr12_-_13153227 AK289877 NM_015987	16666	-	TSC_hg19_v1_chr12_+_13153363 AK125676 AK125093	16835	+	AB099817|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##AF209923|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##BC069341|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##BC107077|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##BC107078|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##NM_018654|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##AF506289|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AF095448|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##BC003665|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AK291171|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AK001761|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AF167473|HEBP1|50865|heme binding protein 1##BT007294|HEBP1|50865|heme binding protein 1##DQ892338|HEBP1|50865|heme binding protein 1##DQ895543|HEBP1|50865|heme binding protein 1##BC016277|HEBP1|50865|heme binding protein 1##AF117615|HEBP1|50865|heme binding protein 1##AK289877|HEBP1|50865|heme binding protein 1##NM_015987|HEBP1|50865|heme binding protein 1##AK125093|HTR7P1|93164|5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1	0.429726	CTCF.p2:5:0.430
chr15	64648716	64648897	reg1022330.p2	5.967	+	TSC_hg19_v1_chr15_-_64648373 AK225960 NM_022048	-406	-	BC130613 BC136504 AL832551 TSC_hg19_v1_chr15_-_64648283	-538	-	TSC_hg19_v1_chr15_-_64455365 BC008848 NM_000942	-193460	-	AF529370 AY598324 AB463081 CU675545 BC005832 D14657 BC007101 TSC_hg19_v1_chr15_-_64673641 AK290748 BC016782 NM_001029989 NM_014736	24829	-	NM_016213 TSC_hg19_v1_chr15_+_64680041 BC012448 AK314319 AB464298 EU446746	31230	+	TSC_hg19_v1_chr15_+_64752786 BC142647	104053	+	AK225960|CSNK1G1|53944|casein kinase 1, gamma 1##NM_022048|CSNK1G1|53944|casein kinase 1, gamma 1##BC130613|CSNK1G1|53944|casein kinase 1, gamma 1##BC136504|CSNK1G1|53944|casein kinase 1, gamma 1##AL832551|CSNK1G1|53944|casein kinase 1, gamma 1##BC008848|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##NM_000942|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##AF529370|KIAA0101|9768|KIAA0101##AY598324|KIAA0101|9768|KIAA0101##BC005832|KIAA0101|9768|KIAA0101##D14657|KIAA0101|9768|KIAA0101##BC007101|KIAA0101|9768|KIAA0101##AK290748|KIAA0101|9768|KIAA0101##BC016782|KIAA0101|9768|KIAA0101##NM_001029989|KIAA0101|9768|KIAA0101##NM_014736|KIAA0101|9768|KIAA0101##NM_016213|TRIP4|9325|thyroid hormone receptor interactor 4##BC012448|TRIP4|9325|thyroid hormone receptor interactor 4##AK314319|TRIP4|9325|thyroid hormone receptor interactor 4##EU446746|TRIP4|9325|thyroid hormone receptor interactor 4##BC142647|ZNF609|23060|zinc finger protein 609	0.345496	CTCF.p2:41:0.345
chr1	64140180	64140316	reg1023439.p1	5.967	+	NM_001172818 AK300100	-51355	+	AK293298 NM_001172819 AK298505	-80734	+	TSC_hg19_v1_chr1_+_64059081 AK294186 BC019920 NM_002633 BC001756 BC067763 AK312254 M83088 BC090856 DQ890618 DQ893786 CU676478 BT006961	-81223	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	99411	+	BC029895 NM_152489	529241	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	796270	+	NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##AK294186|PGM1|5236|phosphoglucomutase 1##BC019920|PGM1|5236|phosphoglucomutase 1##NM_002633|PGM1|5236|phosphoglucomutase 1##BC001756|PGM1|5236|phosphoglucomutase 1##BC067763|PGM1|5236|phosphoglucomutase 1##AK312254|PGM1|5236|phosphoglucomutase 1##M83088|PGM1|5236|phosphoglucomutase 1##BC090856|PGM1|5236|phosphoglucomutase 1##DQ890618|PGM1|5236|phosphoglucomutase 1##DQ893786|PGM1|5236|phosphoglucomutase 1##BT006961|PGM1|5236|phosphoglucomutase 1##AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_020925|CACHD1|57685|cache domain containing 1	0.94299	CTCF.p2:12:0.943
chr19	30537464	30537581	reg1023790.p1	5.967	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	-104240	+	BC026184 NM_001252641	-122972	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	-234621	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	325858	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	1302825	-	FJ211597 NM_001205273	1545664	+	NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5	0.332322	CTCF.p2:-5:0.332
chr4	84031650	84031767	reg1019453.p1	5.967	+	BC012205 NM_001130716	-705	-	NM_016129 AK001148 TSC_hg19_v1_chr4_+_83956368 AK024005 BC093007 AK223178 BC004302 BC009292 AB587420 AF100757 AK001210	-75384	+	TSC_hg19_v1_chr4_-_83934095 AK292769 NM_001115007	-97680	-	AF208846 EU570985 EU570986 TSC_hg19_v1_chr4_-_84035890 AJ422147	4183	-	TSC_hg19_v1_chr4_-_84035912 AK000140 NM_001130715 NM_016619	4219	-	TSC_hg19_v1_chr4_-_84205924 DQ895928 EU176380 BC008804 AK023076	174207	-	BC012205|PLAC8|51316|placenta-specific 8##NM_001130716|PLAC8|51316|placenta-specific 8##NM_016129|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK001148|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK024005|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC093007|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK223178|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC004302|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC009292|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AF100757|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK001210|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK292769|LIN54|132660|lin-54 homolog (C. elegans)##NM_001115007|LIN54|132660|lin-54 homolog (C. elegans)##AF208846|PLAC8|51316|placenta-specific 8##EU570985|PLAC8|51316|placenta-specific 8##EU570986|PLAC8|51316|placenta-specific 8##AJ422147|PLAC8|51316|placenta-specific 8##AK000140|PLAC8|51316|placenta-specific 8##NM_001130715|PLAC8|51316|placenta-specific 8##NM_016619|PLAC8|51316|placenta-specific 8##DQ895928|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##EU176380|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC008804|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK023076|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)	0.0	
chr5	125936472	125936652	reg1025245.p1	5.967	+	TSC_hg19_v1_chr5_-_125930891 AB489160 EU831757 EU831835 S74728 BC073174 BC071712 AK295526 BC002515 AK312459 AK297365 NM_001182 NM_001201377 NM_001202404	-5706	-	NM_001146322 AK303857	-135746	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	-177375	+	AK023255 NM_032177 TSC_hg19_v1_chr5_+_125936641 BC021161 AK024065 AK298497 AK225464 CR457305 DQ893213 DQ896542	70	+	BC130495 BC130497 AK131015 NM_207408 HQ258080	30853	+	NM_005573 BC052951	175753	+	EU831757|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##EU831835|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##S74728|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC073174|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC071712|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK295526|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC002515|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK312459|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK297365|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001182|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001201377|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001202404|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001146322|GRAMD3|65983|GRAM domain containing 3##AK303857|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3##AK023255|PHAX|51808|phosphorylated adaptor for RNA export##NM_032177|PHAX|51808|phosphorylated adaptor for RNA export##BC021161|PHAX|51808|phosphorylated adaptor for RNA export##AK024065|PHAX|51808|phosphorylated adaptor for RNA export##AK298497|PHAX|51808|phosphorylated adaptor for RNA export##AK225464|PHAX|51808|phosphorylated adaptor for RNA export##CR457305|PHAX|51808|phosphorylated adaptor for RNA export##DQ893213|PHAX|51808|phosphorylated adaptor for RNA export##DQ896542|PHAX|51808|phosphorylated adaptor for RNA export##BC130495|C5orf48|389320|chromosome 5 open reading frame 48##BC130497|C5orf48|389320|chromosome 5 open reading frame 48##AK131015|C5orf48|389320|chromosome 5 open reading frame 48##NM_207408|C5orf48|389320|chromosome 5 open reading frame 48##HQ258080|C5orf48|389320|chromosome 5 open reading frame 48##NM_005573|LMNB1|4001|lamin B1##BC052951|LMNB1|4001|lamin B1	0.0	
chr7	74124366	74124494	reg1022338.p1	5.967	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	-52308	+	TSC_hg19_v1_chr7_+_74072046 BC070484	-52386	+	AK292832 TSC_hg19_v1_chr7_+_74072028 AF015553 NM_001163636 NM_001518 NM_032999 NM_033000 NM_033001	-52409	+	BC002816 NM_000265 BC065731 AK127905 AK223217 AK292094 AK316341 AK316552 AB590366 CU678218 DQ893150 DQ896445 U25793	63922	+	AY260739 AY312853 AY336980 BC047706 BC061590 AK225845 AY336979 BC136849 BC067859 AK291431 AY336981 BC038098 NM_173537 AK098269	143409	-	TSC_hg19_v1_chr7_-_74306679 BC002581	182245	-	BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##AK292832|GTF2I|2969|general transcription factor IIi##AF015553|GTF2I|2969|general transcription factor IIi##NM_001163636|GTF2I|2969|general transcription factor IIi##NM_001518|GTF2I|2969|general transcription factor IIi##NM_032999|GTF2I|2969|general transcription factor IIi##NM_033000|GTF2I|2969|general transcription factor IIi##NM_033001|GTF2I|2969|general transcription factor IIi##BC002816|NCF1|653361|neutrophil cytosolic factor 1##NM_000265|NCF1|653361|neutrophil cytosolic factor 1##BC065731|NCF1|653361|neutrophil cytosolic factor 1##AK127905|NCF1|653361|neutrophil cytosolic factor 1##AK223217|NCF1|653361|neutrophil cytosolic factor 1##AK292094|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316341|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316552|NCF1|653361|neutrophil cytosolic factor 1##DQ893150|NCF1|653361|neutrophil cytosolic factor 1##DQ896445|NCF1|653361|neutrophil cytosolic factor 1##U25793|NCF1|653361|neutrophil cytosolic factor 1##AY260739|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336980|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC047706|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC061590|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336979|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AY336981|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC038098|GTF2IRD2|84163|GTF2I repeat domain containing 2##NM_173537|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC002581|STAG3L2|442582|stromal antigen 3-like 2	0.0	
chr7	93918433	93918525	reg1024285.p2	5.966	+	BT009853 DQ894078 BC000899 TSC_hg19_v1_chr7_-_93633668 CR749267 AF007551 AK313984 BC012595 NM_005868	-284865	-	NM_004126 BC009709	-367423	+	BC029367 NM_021955	-382660	+	J03464 NM_000089 X02488	105393	+	TSC_hg19_v1_chr7_+_94024206 AK297786 AK223175 AK300194 Z74616 AK226074 BC042586 BC054498 Y00724 CU691094 AB384984	105792	+	TSC_hg19_v1_chr7_+_94139172 BC029543 NM_022900 BC063284 AF397424	220643	+	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##J03464|COL1A2|1278|collagen, type I, alpha 2##NM_000089|COL1A2|1278|collagen, type I, alpha 2##X02488|COL1A2|1278|collagen, type I, alpha 2##AK297786|COL1A2|1278|collagen, type I, alpha 2##AK223175|COL1A2|1278|collagen, type I, alpha 2##AK300194|COL1A2|1278|collagen, type I, alpha 2##Z74616|COL1A2|1278|collagen, type I, alpha 2##AK226074|COL1A2|1278|collagen, type I, alpha 2##BC042586|COL1A2|1278|collagen, type I, alpha 2##BC054498|COL1A2|1278|collagen, type I, alpha 2##Y00724|COL1A2|1278|collagen, type I, alpha 2##BC029543|CASD1|64921|CAS1 domain containing 1##NM_022900|CASD1|64921|CAS1 domain containing 1##BC063284|CASD1|64921|CAS1 domain containing 1##AF397424|CASD1|64921|CAS1 domain containing 1	0.129119	
chrX	27417144	27417278	reg1026604.p1	5.966	+	AK097561 BC067286 NM_173523	-1206655	+	NM_173699 BC029525 AK057361	-1260725	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-2383138	-	BC157859 NM_001136533	347714	+	AK057527 NM_182506 BC101307 BC101309 BC101310	408904	+	AK128123 NM_001017930	582354	-	AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##NM_139058|ARX|170302|aristaless related homeobox##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	0.992699	CTCF.p2:-13:0.993
chr1	16284087	16284215	reg1025603.p2	5.965	+	TSC_hg19_v1_chr1_+_16259065 BC172907	-25040	+	AF356524 NM_015001 TSC_hg19_v1_chr1_+_16174380	-109772	+	TSC_hg19_v1_chr1_-_16162350 AK094772	-121795	-	TSC_hg19_v1_chr1_-_16302597 BC126163 BC143965 BC143968 Y09723 AK302610 AK301896 AK309081 AK311083 AK315201 AK303823 AK299820 AK223618 AK294796 NM_001242884 NM_003443	18319	-	AK127425 BC017946 NM_178840 CU676116	46612	+	TSC_hg19_v1_chr1_-_16344539 DQ892716 DQ895966 EU176383 EU831930 EU832025 AL832181 AF155908 AJ243191 CR749298 BX537990 AK075151 AK095911 CR749419	60362	-	AF356524|SPEN|23013|spen homolog, transcriptional regulator (Drosophila)##NM_015001|SPEN|23013|spen homolog, transcriptional regulator (Drosophila)##AK094772|FLJ37453|729614|uncharacterized LOC729614##BC126163|ZBTB17|7709|zinc finger and BTB domain containing 17##BC143965|ZBTB17|7709|zinc finger and BTB domain containing 17##BC143968|ZBTB17|7709|zinc finger and BTB domain containing 17##Y09723|ZBTB17|7709|zinc finger and BTB domain containing 17##AK302610|ZBTB17|7709|zinc finger and BTB domain containing 17##AK301896|ZBTB17|7709|zinc finger and BTB domain containing 17##AK309081|ZBTB17|7709|zinc finger and BTB domain containing 17##AK311083|ZBTB17|7709|zinc finger and BTB domain containing 17##AK315201|ZBTB17|7709|zinc finger and BTB domain containing 17##AK303823|ZBTB17|7709|zinc finger and BTB domain containing 17##AK299820|ZBTB17|7709|zinc finger and BTB domain containing 17##AK223618|ZBTB17|7709|zinc finger and BTB domain containing 17##AK294796|ZBTB17|7709|zinc finger and BTB domain containing 17##NM_001242884|ZBTB17|7709|zinc finger and BTB domain containing 17##NM_003443|ZBTB17|7709|zinc finger and BTB domain containing 17##AK127425|C1orf64|149563|chromosome 1 open reading frame 64##BC017946|C1orf64|149563|chromosome 1 open reading frame 64##NM_178840|C1orf64|149563|chromosome 1 open reading frame 64##DQ892716|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##DQ895966|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU176383|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU831930|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU832025|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AL832181|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AF155908|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AJ243191|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##CR749298|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##BX537990|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK075151|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK095911|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##CR749419|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)	0.0	
chr1	60345342	60345470	reg1021732.p1	5.965	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	-64754	+	NM_001244714 AK054842	-569653	+	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	-582794	+	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	46979	-	BC032594 TSC_hg19_v1_chr1_-_60392478	47063	-	BC027878 AK124828 NM_152377	194027	-	AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##BC027878|C1orf87|127795|chromosome 1 open reading frame 87##AK124828|C1orf87|127795|chromosome 1 open reading frame 87##NM_152377|C1orf87|127795|chromosome 1 open reading frame 87	0.947032	CTCF.p2:12:0.947
chr5	151151053	151151194	reg1022575.p2	5.965	+	TSC_hg19_v1_chr5_-_151150991 AB593120	-150	-	TSC_hg19_v1_chr5_-_151138170 AK091843 AX747215 NM_004045 AK293063 BC112248 BC112250	-12908	-	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	-84615	-	TSC_hg19_v1_chr5_+_151151479 BX648012 NM_005754 NM_198395	349	+	TSC_hg19_v1_chr5_+_151151490 AK303580	373	+	TSC_hg19_v1_chr5_+_151151512 AK309172 AK311635 AK312572 BC006997	389	+	AB593120|LOC100652758|100652758|uncharacterized LOC100652758##AK091843|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##NM_004045|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AK293063|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112248|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112250|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BX648012|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_005754|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_198395|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##AK303580|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##AK309172|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##AK312572|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##BC006997|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1	0.535286	CTCF.p2:15:0.535
chr8	142398210	142398321	reg1015766.p3	5.965	+	NM_005293	-20901	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	-134075	-	AK128212 NM_001080431	-159593	-	TSC_hg19_v1_chr8_+_142402120 AK311257	3869	+	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	33796	+	BC144560 AK125848 AK131461 NM_207414	119052	-	NM_005293|GPR20|2843|G protein-coupled receptor 20##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein	0.0	
chrX	64965969	64966116	reg1021443.p1	5.965	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	-78394	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	-78495	+	NM_002444 TSC_hg19_v1_chrX_+_64887520	-78525	+	TSC_hg19_v1_chrX_+_65235302 DQ680071 DQ680072	269249	+	DQ891770 DQ894953 BC010525 AJ132502 AK293215 AK298389 AK075153 AK297050 AK301417 AK075171 NM_001100431 NM_001184830 NM_001184831 NM_007268	293860	-	NM_138737 TSC_hg19_v1_chrX_+_65382512	416433	+	AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##NM_002444|MSN|4478|moesin##DQ891770|VSIG4|11326|V-set and immunoglobulin domain containing 4##DQ894953|VSIG4|11326|V-set and immunoglobulin domain containing 4##BC010525|VSIG4|11326|V-set and immunoglobulin domain containing 4##AJ132502|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK293215|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK298389|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075153|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK297050|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK301417|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075171|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001100431|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184830|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184831|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_007268|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_138737|HEPH|9843|hephaestin	0.256079	CTCF.p2:-19:0.256
chr10	64492809	64492990	reg1020041.p1	5.964	+	AJ505150 NM_199452	-212693	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-358856	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-464360	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	71643	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	71758	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	83198	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.0	
chr1	200245750	200245845	reg1021892.p2	5.964	+	NM_001105517	-63142	+	AK316513 TSC_hg19_v1_chr1_+_200011716	-234073	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	-248928	+	AK021707 TSC_hg19_v1_chr1_-_200377270	131472	-	TSC_hg19_v1_chr1_-_200377488 AK022921	131741	-	AB384788 CU687444 AF125158 BC051905 TSC_hg19_v1_chr1_-_200378976	133112	-	NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK021707|ZNF281|23528|zinc finger protein 281##AK022921|ZNF281|23528|zinc finger protein 281##AF125158|ZNF281|23528|zinc finger protein 281##BC051905|ZNF281|23528|zinc finger protein 281	0.065203	
chr16	67515209	67515344	reg1025709.p1	5.964	+	CU679153 DQ893270 DQ896601 X71490 TSC_hg19_v1_chr16_-_67515051 AK300570 AK313035 AK125522 BC008861 NM_004691	-232	-	TSC_hg19_v1_chr16_+_67465023 U26726 BC036780 BC064536 NM_000196 U14631	-50246	+	TSC_hg19_v1_chr16_-_67450360 NM_013304 U90653 BC021908	-64979	-	NM_001138 U88063	2439	-	TSC_hg19_v1_chr16_+_67562734 NM_024519 AK127792 NM_001193522 AK307467 BC012730	47465	+	NM_001193523 AK293748	48308	+	DQ893270|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##DQ896601|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##X71490|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK300570|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK313035|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK125522|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##BC008861|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_004691|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_013304|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U90653|ZDHHC1|29800|zinc finger, DHHC-type containing 1##BC021908|ZDHHC1|29800|zinc finger, DHHC-type containing 1##NM_001138|AGRP|181|agouti related protein homolog (mouse)##U88063|AGRP|181|agouti related protein homolog (mouse)##NM_024519|FAM65A|79567|family with sequence similarity 65, member A##AK127792|FAM65A|79567|family with sequence similarity 65, member A##NM_001193522|FAM65A|79567|family with sequence similarity 65, member A##AK307467|FAM65A|79567|family with sequence similarity 65, member A##NM_001193523|FAM65A|79567|family with sequence similarity 65, member A##AK293748|FAM65A|79567|family with sequence similarity 65, member A	0.206109	CTCF.p2:-30:0.206
chr7	129284567	129284724	reg1022761.p1	5.964	+	L22454 NM_001040110	-14728	+	AK293351 TSC_hg19_v1_chr7_+_129251621 BC016925 AK290891	-33033	+	TSC_hg19_v1_chr7_+_129251531 NM_005011	-33104	+	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	308106	-	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	308164	-	TSC_hg19_v1_chr7_-_129691215 BC000190 AB463378 AJ537494 AM393415 CU679956 BC011551 AF151050 AK001317 AK022373 NM_016478	406576	-	L22454|NRF1|4899|nuclear respiratory factor 1##NM_001040110|NRF1|4899|nuclear respiratory factor 1##AK293351|NRF1|4899|nuclear respiratory factor 1##BC016925|NRF1|4899|nuclear respiratory factor 1##AK290891|NRF1|4899|nuclear respiratory factor 1##NM_005011|NRF1|4899|nuclear respiratory factor 1##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC000190|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AJ537494|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AM393415|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC011551|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AF151050|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK001317|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK022373|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_016478|ZC3HC1|51530|zinc finger, C3HC-type containing 1	0.83006	CTCF.p2:19:0.830
chr14	27453922	27454018	reg1024002.p1	5.963	+	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	-386982	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	-1934732	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-2350552	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	1782258	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	1782943	+	TSC_hg19_v1_chr14_+_29241992 BX248251	1788025	+	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23	0.999852	CTCF.p2:-15:1.000
chr3	141899772	141899926	reg1023327.p1	5.963	+	TSC_hg19_v1_chr3_-_141868338 AK314786 BC013993 U35117 NM_001178138 NM_001178139	-31525	-	BC002405 AK303634 U18422 BC007976 AK303181 TSC_hg19_v1_chr3_-_141747469 NM_001178141 NM_001178142 NM_006286	-152379	-	AL080206 NM_001178140	-180641	-	DQ891607 DQ894800 TSC_hg19_v1_chr3_-_141944428 AK313792 BX648681 BC032470 AK127641 BX648359 AK310761	44516	-	TSC_hg19_v1_chr3_-_141944444 NM_001039547	44605	-	TSC_hg19_v1_chr3_-_142166860 AY137776 AB527239 BC048104 BC078146 CR749518 BC039314 BX640905 NM_001042604 NM_019001 AK304312 CR627396	266972	-	AK314786|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC013993|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U35117|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178138|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178139|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AL080206|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178140|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##DQ891607|GK5|256356|glycerol kinase 5 (putative)##DQ894800|GK5|256356|glycerol kinase 5 (putative)##AK313792|GK5|256356|glycerol kinase 5 (putative)##BX648681|GK5|256356|glycerol kinase 5 (putative)##BC032470|GK5|256356|glycerol kinase 5 (putative)##AK127641|GK5|256356|glycerol kinase 5 (putative)##BX648359|GK5|256356|glycerol kinase 5 (putative)##AK310761|GK5|256356|glycerol kinase 5 (putative)##NM_001039547|GK5|256356|glycerol kinase 5 (putative)##AY137776|XRN1|54464|5'-3' exoribonuclease 1##BC048104|XRN1|54464|5'-3' exoribonuclease 1##BC078146|XRN1|54464|5'-3' exoribonuclease 1##CR749518|XRN1|54464|5'-3' exoribonuclease 1##BC039314|XRN1|54464|5'-3' exoribonuclease 1##BX640905|XRN1|54464|5'-3' exoribonuclease 1##NM_001042604|XRN1|54464|5'-3' exoribonuclease 1##NM_019001|XRN1|54464|5'-3' exoribonuclease 1##AK304312|XRN1|54464|5'-3' exoribonuclease 1##CR627396|XRN1|54464|5'-3' exoribonuclease 1	0.968325	CTCF.p2:-41:0.968
chr4	150931805	150931900	reg1019830.p1	5.963	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-1568268	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-1568513	-	TSC_hg19_v1_chr4_-_149357955 AB587357	-1573870	-	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	67673	+	NM_006439	571224	+	TSC_hg19_v1_chr4_-_151770612 AB208838	838797	-	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.99721	CTCF.p2:10:0.897
chr5	96499092	96499262	reg1022544.p2	5.963	+	AK291034 TSC_hg19_v1_chr5_-_96478504 NM_153234 AK098400	-20639	-	AK307885 TSC_hg19_v1_chr5_-_96478482	-20702	-	BC036467 TSC_hg19_v1_chr5_-_96478440	-20735	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	19731	-	TSC_hg19_v1_chr5_-_96518945 AK002021	19765	-	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	19810	-	AK291034|LIX1|167410|Lix1 homolog (chicken)##NM_153234|LIX1|167410|Lix1 homolog (chicken)##AK098400|LIX1|167410|Lix1 homolog (chicken)##AK307885|LIX1|167410|Lix1 homolog (chicken)##BC036467|LIX1|167410|Lix1 homolog (chicken)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)	0.998708	CTCF.p2:-15:0.999
chr8	70544310	70544458	reg1027819.p1	5.963	+	AY101175 TSC_hg19_v1_chr8_+_70405081 AK055607 BX571746	-139295	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	-139345	+	TSC_hg19_v1_chr8_+_70379077 AK307951	-165304	+	BC137424 BC144618 NM_001146009	201019	-	AK022760 NM_001146008	201240	-	AK308488 AF205075 AK096879 NM_030958	202865	-	AY101175|SULF1|23213|sulfatase 1##AK055607|SULF1|23213|sulfatase 1##BX571746|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	0.437338	CTCF.p2:-14:0.437
chr9	104311938	104312043	reg1022187.p1	5.963	+	TSC_hg19_v1_chr9_+_104296175 AK314401	-15820	+	TSC_hg19_v1_chr9_+_104296143 BC016691 BC063115	-15843	+	TSC_hg19_v1_chr9_+_104296134 AF265230 NM_019592 AK022532 BC110584 BC110585 BC152309	-15860	+	AF085237 AF145026 BC066299 AK057524 AK302547 AF400667 BC030595 NM_147180 AK310471	45262	-	TSC_hg19_v1_chr9_-_104500218 AB385519 AF416558 AJ416950	188255	-	AB075853 BC167432 NM_133445 TSC_hg19_v1_chr9_-_104500930	188911	-	AK314401|RNF20|56254|ring finger protein 20##BC016691|RNF20|56254|ring finger protein 20##BC063115|RNF20|56254|ring finger protein 20##AF265230|RNF20|56254|ring finger protein 20##NM_019592|RNF20|56254|ring finger protein 20##AK022532|RNF20|56254|ring finger protein 20##BC110584|RNF20|56254|ring finger protein 20##BC110585|RNF20|56254|ring finger protein 20##BC152309|RNF20|56254|ring finger protein 20##AF085237|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF145026|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC066299|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AK057524|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF400667|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC030595|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##NM_147180|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF416558|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AJ416950|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AB075853|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##BC167432|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##NM_133445|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A	0.857013	CTCF.p2:6:0.830
chr9	122128079	122128162	reg1023041.p2	5.963	+	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-1661433	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	-1661506	+	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	-1661656	+	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	3538	-	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	1214233	-	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	1348597	-	U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4##BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9	0.865783	CTCF.p2:5:0.866
chr18	48188661	48188802	reg1023308.p2	5.962	+	TSC_hg19_v1_chr18_+_48086463 BC050299 NM_002747 AK293818 BC040493 AK295058	-102234	+	TSC_hg19_v1_chr18_+_47901415 NM_001039535 NM_145060 BC015706 AK313968 AK303464	-287334	+	BX647189 NM_001101654 NM_014593	-374040	-	AB042647 AK054702 AK295666 NM_001127175 NM_001127176 NM_031939	157634	-	BC029860 NM_001127174	163011	-	TSC_hg19_v1_chr18_+_48405434 NM_001168335 NM_002396	216703	+	BC050299|MAPK4|5596|mitogen-activated protein kinase 4##NM_002747|MAPK4|5596|mitogen-activated protein kinase 4##AK293818|MAPK4|5596|mitogen-activated protein kinase 4##BC040493|MAPK4|5596|mitogen-activated protein kinase 4##AK295058|MAPK4|5596|mitogen-activated protein kinase 4##NM_001039535|SKA1|220134|spindle and kinetochore associated complex subunit 1##NM_145060|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC015706|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK313968|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK303464|SKA1|220134|spindle and kinetochore associated complex subunit 1##BX647189|CXXC1|30827|CXXC finger protein 1##NM_001101654|CXXC1|30827|CXXC finger protein 1##NM_014593|CXXC1|30827|CXXC finger protein 1##AB042647|MRO|83876|maestro##AK054702|MRO|83876|maestro##AK295666|MRO|83876|maestro##NM_001127175|MRO|83876|maestro##NM_001127176|MRO|83876|maestro##NM_031939|MRO|83876|maestro##BC029860|MRO|83876|maestro##NM_001127174|MRO|83876|maestro##NM_001168335|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##NM_002396|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial	0.99828	CTCF.p2:-2:0.998
chr19	19471980	19472122	reg1023342.p1	5.962	+	TSC_hg19_v1_chr19_+_19431662 AB385396	-40387	+	TSC_hg19_v1_chr19_+_19431637 NM_015329 AB020699	-40417	+	AK096152 AK292085 AK294618 AK301119 BC119728 BC119729 BC142988 TSC_hg19_v1_chr19_-_19431319 NM_172231	-40700	-	TSC_hg19_v1_chr19_+_19496634 NM_017660 AK303482	24655	+	AB464723 DQ891603 DQ894797 AF329483 AK058166 AK313767 BC014611 NM_032037 AF348077	154314	-	TSC_hg19_v1_chr19_+_19626536 AF261134	154514	+	NM_015329|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AB020699|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AK096152|SUGP1|57794|SURP and G patch domain containing 1##AK292085|SUGP1|57794|SURP and G patch domain containing 1##AK294618|SUGP1|57794|SURP and G patch domain containing 1##AK301119|SUGP1|57794|SURP and G patch domain containing 1##BC119728|SUGP1|57794|SURP and G patch domain containing 1##BC119729|SUGP1|57794|SURP and G patch domain containing 1##BC142988|SUGP1|57794|SURP and G patch domain containing 1##NM_172231|SUGP1|57794|SURP and G patch domain containing 1##NM_017660|GATAD2A|54815|GATA zinc finger domain containing 2A##AK303482|GATAD2A|54815|GATA zinc finger domain containing 2A##DQ891603|TSSK6|83983|testis-specific serine kinase 6##DQ894797|TSSK6|83983|testis-specific serine kinase 6##AF329483|TSSK6|83983|testis-specific serine kinase 6##AK058166|TSSK6|83983|testis-specific serine kinase 6##AK313767|TSSK6|83983|testis-specific serine kinase 6##BC014611|TSSK6|83983|testis-specific serine kinase 6##NM_032037|TSSK6|83983|testis-specific serine kinase 6##AF348077|TSSK6|83983|testis-specific serine kinase 6##AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	0.994538	CTCF.p2:-7:0.995
chr2	160031823	160031938	reg1023185.p1	5.962	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	-206733	+	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	-380045	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-718297	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	111268	-	AK127551 BC107570 TSC_hg19_v1_chr2_-_160472070	440134	-	BX647250 AL834381 TSC_hg19_v1_chr2_-_160473021 NM_013450 AB040909	441139	-	BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	0.0	
chr2	200123148	200123236	reg1020249.p1	5.962	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	-1453822	+	NM_197970 AK302817	-1472206	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-1473152	-	TSC_hg19_v1_chr2_-_200213802 AK025127	90658	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	197610	-	TSC_hg19_v1_chr2_-_200322238 AJ438951	199058	-	AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2##AJ438951|SATB2|23314|SATB homeobox 2	0.17626	
chr4	107730390	107730492	reg1024619.p2	5.962	+	NM_001195138	-441850	-	AK074305 NM_001163436	-492614	-	TSC_hg19_v1_chr4_+_107237727 U10117	-492711	+	NM_014421 AF177395	227011	-	BC011392 AF016496 CR457028 CU690750 BC040940 TSC_hg19_v1_chr4_-_108641372 BC050627 AF033026 AK292774 AK297981 Y10387 BC032513 AF105227 NM_005443	910923	-	AK290344 NM_001136258 AF452717	1015326	+	NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like##AK074305|TBCK|93627|TBC1 domain containing kinase##NM_001163436|TBCK|93627|TBC1 domain containing kinase##U10117|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_014421|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##AF177395|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##BC011392|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF016496|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##CR457028|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC040940|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC050627|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF033026|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK292774|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK297981|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##Y10387|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC032513|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF105227|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##NM_005443|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK290344|SGMS2|166929|sphingomyelin synthase 2##NM_001136258|SGMS2|166929|sphingomyelin synthase 2##AF452717|SGMS2|166929|sphingomyelin synthase 2	0.973651	CTCF.p2:17:0.974
chr4	8588509	8588603	reg1020254.p1	5.962	+	AK128807 NM_080819 BC057778 AY359107	-6241	+	TSC_hg19_v1_chr4_+_8442503 NM_152544	-146042	+	Y11411 BC017053 TSC_hg19_v1_chr4_-_8442447 AK225080 NM_001101667 NM_003501	-146100	-	AK056317 NM_001014447 NM_001014448 NM_003652 BC080539 BC006393 BC018913 TSC_hg19_v1_chr4_+_8594489	5883	+	U83411 TSC_hg19_v1_chr4_+_8594521	5967	+	AB593128 M99587 NM_018942	284941	-	AK128807|GPR78|27201|G protein-coupled receptor 78##NM_080819|GPR78|27201|G protein-coupled receptor 78##BC057778|GPR78|27201|G protein-coupled receptor 78##AY359107|GPR78|27201|G protein-coupled receptor 78##NM_152544|METTL19|152992|methyltransferase like 19##Y11411|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##BC017053|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK225080|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_001101667|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_003501|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK056317|CPZ|8532|carboxypeptidase Z##NM_001014447|CPZ|8532|carboxypeptidase Z##NM_001014448|CPZ|8532|carboxypeptidase Z##NM_003652|CPZ|8532|carboxypeptidase Z##BC080539|CPZ|8532|carboxypeptidase Z##BC006393|CPZ|8532|carboxypeptidase Z##BC018913|CPZ|8532|carboxypeptidase Z##U83411|CPZ|8532|carboxypeptidase Z##M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1	0.976564	CTCF.p2:-21:0.977
chrX	86838785	86838885	reg1024193.p1	5.962	+	NM_019117 NM_057162 AK056457 AB051474 BC161675 AL832514 AF284765 AF284766 BC140839 BC140840 BC142652 BC146677 AB385497	-66030	+	AK055953 AK298787 NM_001139515	-1320865	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	-1435370	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	1163405	+	BC117398 BC117400 NM_138960 BC101144 BC101145 AF497480 BC029920 AB464725 HQ258115	2338176	+	NM_080832	3850761	+	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)##NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)##AK056457|KLHL4|56062|kelch-like 4 (Drosophila)##AB051474|KLHL4|56062|kelch-like 4 (Drosophila)##BC161675|KLHL4|56062|kelch-like 4 (Drosophila)##AL832514|KLHL4|56062|kelch-like 4 (Drosophila)##AF284765|KLHL4|56062|kelch-like 4 (Drosophila)##AF284766|KLHL4|56062|kelch-like 4 (Drosophila)##BC140839|KLHL4|56062|kelch-like 4 (Drosophila)##BC140840|KLHL4|56062|kelch-like 4 (Drosophila)##BC142652|KLHL4|56062|kelch-like 4 (Drosophila)##BC146677|KLHL4|56062|kelch-like 4 (Drosophila)##AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1##BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_080832|PABPC5|140886|poly(A) binding protein, cytoplasmic 5	0.998274	CTCF.p2:17:0.998
chr12	52784900	52785004	reg1023248.p2	5.961	+	AJ628420 BC069647 NM_033045 AK314030	-5554	-	X99140 NM_002283	-23671	-	BC126935 BC128063 BC069546 X99141 AK314904 NM_002282	-69792	-	AB527176 AJ628419 NM_033033	15167	-	Y17282 AK225962 NM_004693	43155	-	CU689912 AB590330 DQ891327 DQ894511 L42612 BC034535 NM_005555 AK296729	60964	-	AJ628420|KRT84|3890|keratin 84##BC069647|KRT84|3890|keratin 84##NM_033045|KRT84|3890|keratin 84##AK314030|KRT84|3890|keratin 84##X99140|KRT85|3891|keratin 85##NM_002283|KRT85|3891|keratin 85##BC126935|KRT83|3889|keratin 83##BC128063|KRT83|3889|keratin 83##BC069546|KRT83|3889|keratin 83##X99141|KRT83|3889|keratin 83##AK314904|KRT83|3889|keratin 83##NM_002282|KRT83|3889|keratin 83##AJ628419|KRT82|3888|keratin 82##NM_033033|KRT82|3888|keratin 82##Y17282|KRT75|9119|keratin 75##AK225962|KRT75|9119|keratin 75##NM_004693|KRT75|9119|keratin 75##DQ891327|KRT6B|3854|keratin 6B##DQ894511|KRT6B|3854|keratin 6B##L42612|KRT6B|3854|keratin 6B##BC034535|KRT6B|3854|keratin 6B##NM_005555|KRT6B|3854|keratin 6B##AK296729|KRT6B|3854|keratin 6B	0.403309	CTCF.p2:1:0.403	CTCF.p2:108:0.408
chr17	7754996	7755176	reg1000690.p1	5.960	+	AB002344 NM_001080424	-11853	+	TSC_hg19_v1_chr17_+_7741696 BC067879	-13413	+	NM_020877 AB385476 AB463017	-132041	+	TSC_hg19_v1_chr17_+_7758383 AK000032 BC057812 NM_203411	3296	+	DQ893290 DQ893319 DQ896634 AF530060 CU687386 BC059944 TSC_hg19_v1_chr17_-_7760878 BC006407	5734	-	AK057061 NM_144607	5977	+	AB002344|KDM6B|23135|lysine (K)-specific demethylase 6B##NM_001080424|KDM6B|23135|lysine (K)-specific demethylase 6B##NM_020877|DNAH2|146754|dynein, axonemal, heavy chain 2##AK000032|TMEM88|92162|transmembrane protein 88##BC057812|TMEM88|92162|transmembrane protein 88##NM_203411|TMEM88|92162|transmembrane protein 88##DQ893290|LSMD1|84316|LSM domain containing 1##DQ893319|LSMD1|84316|LSM domain containing 1##DQ896634|LSMD1|84316|LSM domain containing 1##AF530060|LSMD1|84316|LSM domain containing 1##BC059944|LSMD1|84316|LSM domain containing 1##BC006407|LSMD1|84316|LSM domain containing 1##AK057061|CYB5D1|124637|cytochrome b5 domain containing 1##NM_144607|CYB5D1|124637|cytochrome b5 domain containing 1	0.0	
chr7	148787884	148788011	reg1022890.p1	5.960	+	TSC_hg19_v1_chr7_-_148787872 NM_152411	-47	-	TSC_hg19_v1_chr7_-_148787844 BX647929 AK095701	-114	-	AB463377 AM392873 AM392921 TSC_hg19_v1_chr7_-_148787811 BC109245 BC128392 AL834510 AK297472	-175	-	TSC_hg19_v1_chr7_-_148823339 AK125575 BC125189 AK056498 AY621067	35390	-	TSC_hg19_v1_chr7_-_148823395 NM_001001661	35466	-	TSC_hg19_v1_chr7_+_148823499 AY049743 NM_020781	35555	+	NM_152411|ZNF786|136051|zinc finger protein 786##BX647929|ZNF786|136051|zinc finger protein 786##AK095701|ZNF786|136051|zinc finger protein 786##AM392873|ZNF786|136051|zinc finger protein 786##AM392921|ZNF786|136051|zinc finger protein 786##BC109245|ZNF786|136051|zinc finger protein 786##BC128392|ZNF786|136051|zinc finger protein 786##AL834510|ZNF786|136051|zinc finger protein 786##AK297472|ZNF786|136051|zinc finger protein 786##BC125189|ZNF425|155054|zinc finger protein 425##AK056498|ZNF425|155054|zinc finger protein 425##AY621067|ZNF425|155054|zinc finger protein 425##NM_001001661|ZNF425|155054|zinc finger protein 425##AY049743|ZNF398|57541|zinc finger protein 398##NM_020781|ZNF398|57541|zinc finger protein 398	0.03295	
chr7	5595065	5595203	reg1023990.p1	5.960	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-24925	-	TSC_hg19_v1_chr7_-_5569235 BC012854 CU680416 EF095209 BC008633 DQ471327 AB385102 DQ890960 DQ894128 K00790	-25888	-	BC113036 TSC_hg19_v1_chr7_-_5568855	-26293	-	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	37304	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	37376	+	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	226088	-	X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##BC012854|ACTB|60|actin, beta##EF095209|ACTB|60|actin, beta##BC008633|ACTB|60|actin, beta##DQ471327|ACTB|60|actin, beta##DQ890960|ACTB|60|actin, beta##DQ894128|ACTB|60|actin, beta##K00790|ACTB|60|actin, beta##BC113036|ACTB|60|actin, beta##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216	0.834268	CTCF.p2:91:0.718
chr13	41019797	41019977	reg1019805.p2	5.959	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-790026	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-842525	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-842560	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	220825	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	325405	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	325445	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.0	
chr2	178974692	178974845	reg1024205.p1	5.959	+	AB038041 NM_001077197	-1703	-	BC112393 BC114431 AB036704 NM_016953 TSC_hg19_v1_chr2_-_178937505 AK309155	-37260	-	AF281865 NM_001077358	-187226	-	AF526533 BC037837 BC066549 NM_152945 TSC_hg19_v1_chr2_+_178977198 AK126575 AB036991 CU688160	2443	+	TSC_hg19_v1_chr2_+_179059238 AB208898 NM_001201480 NM_001201481 NM_001201482 NM_032523 BC052259 AK300389 AF323728 AF392448	84456	+	AK093902 AX748360 NM_145739	210202	+	AB038041|PDE11A|50940|phosphodiesterase 11A##NM_001077197|PDE11A|50940|phosphodiesterase 11A##BC112393|PDE11A|50940|phosphodiesterase 11A##BC114431|PDE11A|50940|phosphodiesterase 11A##AB036704|PDE11A|50940|phosphodiesterase 11A##NM_016953|PDE11A|50940|phosphodiesterase 11A##AF281865|PDE11A|50940|phosphodiesterase 11A##NM_001077358|PDE11A|50940|phosphodiesterase 11A##AF526533|RBM45|129831|RNA binding motif protein 45##BC037837|RBM45|129831|RNA binding motif protein 45##BC066549|RBM45|129831|RNA binding motif protein 45##NM_152945|RBM45|129831|RNA binding motif protein 45##AK126575|RBM45|129831|RNA binding motif protein 45##AB036991|RBM45|129831|RNA binding motif protein 45##AB208898|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201480|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201481|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201482|OSBPL6|114880|oxysterol binding protein-like 6##NM_032523|OSBPL6|114880|oxysterol binding protein-like 6##BC052259|OSBPL6|114880|oxysterol binding protein-like 6##AK300389|OSBPL6|114880|oxysterol binding protein-like 6##AF323728|OSBPL6|114880|oxysterol binding protein-like 6##AF392448|OSBPL6|114880|oxysterol binding protein-like 6##AK093902|OSBPL6|114880|oxysterol binding protein-like 6##NM_145739|OSBPL6|114880|oxysterol binding protein-like 6	0.999301	CTCF.p2:-12:0.999
chr10	119079706	119079824	reg1025725.p1	5.958	+	NM_003054 BC030593 TSC_hg19_v1_chr10_+_119000626 AK314997 L23205 L09118 X71354 L14269 BC108927 BC108928	-79115	+	AB087138 AB464053 NM_181840	-122766	+	AK127095 NM_001112704 NM_199131	-181954	-	CU688476 TSC_hg19_v1_chr10_-_119134939 BC012186 BC028375 NM_173791 AK091746 AX747159 BC033019	55116	-	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	222151	-	AF301598 NM_001165924 NM_004098	222190	+	NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AB087138|KCNK18|338567|potassium channel, subfamily K, member 18##NM_181840|KCNK18|338567|potassium channel, subfamily K, member 18##AK127095|VAX1|11023|ventral anterior homeobox 1##NM_001112704|VAX1|11023|ventral anterior homeobox 1##NM_199131|VAX1|11023|ventral anterior homeobox 1##BC012186|PDZD8|118987|PDZ domain containing 8##BC028375|PDZD8|118987|PDZ domain containing 8##NM_173791|PDZD8|118987|PDZ domain containing 8##AK091746|PDZD8|118987|PDZ domain containing 8##BC033019|PDZD8|118987|PDZ domain containing 8##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AF301598|EMX2|2018|empty spiracles homeobox 2##NM_001165924|EMX2|2018|empty spiracles homeobox 2##NM_004098|EMX2|2018|empty spiracles homeobox 2	0.260935	CTCF.p2:10:0.261
chr1	42192592	42192773	reg1023333.p2	5.958	+	BC034393 X55177 M65199 NM_001956	-242363	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-484846	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-484897	-	TSC_hg19_v1_chr1_-_42384357 BC040942	191660	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	191691	-	TSC_hg19_v1_chr1_-_42501606 BC046120	308947	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.634017	CTCF.p2:-62:0.622
chr15	48629267	48629382	reg1022222.p2	5.958	+	TSC_hg19_v1_chr15_+_48624363 AK291515 NM_001948 AK312122 U31930 U62891 L11877 AB049113 M89913 DQ891191 DQ894375 CR541720 CR541781	-4923	+	TSC_hg19_v1_chr15_+_48623625 NM_001025248 NM_001025249 AK000629 BC070339 BC110377 AK298464 U90223 AB528727	-5660	+	NM_000338 NM_001184832 AK129998 AK298312 BC020860	-130827	+	TSC_hg19_v1_chr15_-_48937070 L13923	307759	-	TSC_hg19_v1_chr15_-_48937907 BC146854 AK304737 BC094721 NM_000138 X63556	308605	-	BC117182 TSC_hg19_v1_chr15_-_49103277 AB020719 BC069186 AK303805 BX648822 BC107721 NM_001194998 NM_014985	473938	-	AK291515|DUT|1854|deoxyuridine triphosphatase##NM_001948|DUT|1854|deoxyuridine triphosphatase##AK312122|DUT|1854|deoxyuridine triphosphatase##U31930|DUT|1854|deoxyuridine triphosphatase##U62891|DUT|1854|deoxyuridine triphosphatase##L11877|DUT|1854|deoxyuridine triphosphatase##AB049113|DUT|1854|deoxyuridine triphosphatase##M89913|DUT|1854|deoxyuridine triphosphatase##DQ891191|DUT|1854|deoxyuridine triphosphatase##DQ894375|DUT|1854|deoxyuridine triphosphatase##CR541720|DUT|1854|deoxyuridine triphosphatase##CR541781|DUT|1854|deoxyuridine triphosphatase##NM_001025248|DUT|1854|deoxyuridine triphosphatase##NM_001025249|DUT|1854|deoxyuridine triphosphatase##AK000629|DUT|1854|deoxyuridine triphosphatase##BC070339|DUT|1854|deoxyuridine triphosphatase##BC110377|DUT|1854|deoxyuridine triphosphatase##AK298464|DUT|1854|deoxyuridine triphosphatase##U90223|DUT|1854|deoxyuridine triphosphatase##NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##L13923|FBN1|2200|fibrillin 1##BC146854|FBN1|2200|fibrillin 1##AK304737|FBN1|2200|fibrillin 1##BC094721|FBN1|2200|fibrillin 1##NM_000138|FBN1|2200|fibrillin 1##X63556|FBN1|2200|fibrillin 1##BC117182|CEP152|22995|centrosomal protein 152kDa##AB020719|CEP152|22995|centrosomal protein 152kDa##BC069186|CEP152|22995|centrosomal protein 152kDa##AK303805|CEP152|22995|centrosomal protein 152kDa##BX648822|CEP152|22995|centrosomal protein 152kDa##BC107721|CEP152|22995|centrosomal protein 152kDa##NM_001194998|CEP152|22995|centrosomal protein 152kDa##NM_014985|CEP152|22995|centrosomal protein 152kDa	0.808787	CTCF.p2:-8:0.798
chr2	232270569	232270668	reg1017006.p2	5.958	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	-10196	+	TSC_hg19_v1_chr2_+_232120778 AB055779	-149840	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-207224	+	AK001314 TSC_hg19_v1_chr2_-_232326464	55811	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	58517	-	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	58617	-	AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AY929062|ARMC9|80210|armadillo repeat containing 9##AK001314|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin##BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin	0.0	
chr5	70363528	70363658	reg1022650.p1	5.958	+	BC171860 BC171919 U21911 AF078847 NM_001515 AK296578 BX537982 BC005345	-139	-	AB048534 NM_004536 NM_022892	-42653	-	NM_000344 NM_017411 NM_022874 NM_022875 NM_022876 NM_022877 AK298203 AK289669 U18423 BC000908 BC015308 BC062723 BC070242 AB590961 CU674452 DQ891546 DQ894095 DQ894734 EU176224 EU176225 U21914	-142743	+	TSC_hg19_v1_chr5_+_70751479 NM_018429 AK057871 AF176695 BC032146 AJ238520	387883	+	AF298151 AF298152 TSC_hg19_v1_chr5_+_70751649 AB051476 BC146792 AB384624 BC161615	388070	+	TSC_hg19_v1_chr5_+_70883108 BC014897 NM_022132	519514	+	BC171860|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BC171919|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##U21911|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AF078847|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##NM_001515|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AK296578|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##BX537982|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##BC005345|GTF2H2|2966|general transcription factor IIH, polypeptide 2, 44kDa##AB048534|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_004536|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_022892|NAIP|4671|NLR family, apoptosis inhibitory protein##NM_000344|SMN1|6606|survival of motor neuron 1, telomeric##NM_017411|SMN2|6607|survival of motor neuron 2, centromeric##NM_022874|SMN1|6606|survival of motor neuron 1, telomeric##NM_022875|SMN2|6607|survival of motor neuron 2, centromeric##NM_022876|SMN2|6607|survival of motor neuron 2, centromeric##NM_022877|SMN2|6607|survival of motor neuron 2, centromeric##AK298203|SMN1|6606|survival of motor neuron 1, telomeric##AK289669|SMN2|6607|survival of motor neuron 2, centromeric##U18423|SMN1|6606|survival of motor neuron 1, telomeric##BC000908|SMN2|6607|survival of motor neuron 2, centromeric##BC015308|SMN2|6607|survival of motor neuron 2, centromeric##BC062723|SMN1|6606|survival of motor neuron 1, telomeric##BC070242|SMN2|6607|survival of motor neuron 2, centromeric##DQ891546|SMN2|6607|survival of motor neuron 2, centromeric##DQ894095|SMN1|6606|survival of motor neuron 1, telomeric##DQ894734|SMN2|6607|survival of motor neuron 2, centromeric##EU176224|SMN1|6606|survival of motor neuron 1, telomeric##EU176225|SMN2|6607|survival of motor neuron 2, centromeric##U21914|SMN2|6607|survival of motor neuron 2, centromeric##NM_018429|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AK057871|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AF176695|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC032146|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AJ238520|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AF298151|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AF298152|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##AB051476|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC146792|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC161615|BDP1|55814|B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB##BC014897|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##NM_022132|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)	0.0	
chr6	5078673	5078827	reg1024931.p2	5.958	+	TSC_hg19_v1_chr6_+_5030223 BC042032 BC133670	-48517	+	TSC_hg19_v1_chr6_-_5004262 BC017871 NM_006638	-74480	-	TSC_hg19_v1_chr6_+_5004043 AK094934	-74724	+	NM_001145115	6969	+	AF088060 EU831799 EU831876 TSC_hg19_v1_chr6_-_5260976 AK309661 AK291158 BC067762 AF170070 AF285118 BC009552	182247	-	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	182416	-	BC042032|LOC100129461|100129461|uncharacterized LOC100129461##BC133670|LOC100129461|100129461|uncharacterized LOC100129461##BC017871|RPP40|10799|ribonuclease P/MRP 40kDa subunit##NM_006638|RPP40|10799|ribonuclease P/MRP 40kDa subunit##AK094934|LOC285778|285778|uncharacterized LOC285778##NM_001145115|PPP1R3G|648791|protein phosphatase 1, regulatory subunit 3G##AF088060|LYRM4|57128|LYR motif containing 4##EU831799|LYRM4|57128|LYR motif containing 4##EU831876|LYRM4|57128|LYR motif containing 4##AK309661|LYRM4|57128|LYR motif containing 4##AK291158|LYRM4|57128|LYR motif containing 4##BC067762|LYRM4|57128|LYR motif containing 4##AF170070|LYRM4|57128|LYR motif containing 4##AF285118|LYRM4|57128|LYR motif containing 4##BC009552|LYRM4|57128|LYR motif containing 4##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4	0.791903	CTCF.p2:-9:0.792
chr6	85836747	85836882	reg1024712.p1	5.958	+	HQ258462 NM_001080508 BC157841 BC132715	-362889	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	-363644	-	TSC_hg19_v1_chr6_-_85472330 AJ010278	-364489	-	NM_001204813 NM_002526 TSC_hg19_v1_chr6_+_86159433	322558	+	TSC_hg19_v1_chr6_+_86159827 AK314661 AX772810 X55740 BC015940 AK075008 BC065937 DQ186653	323001	+	BC046520 AY044865 CU686683 TSC_hg19_v1_chr6_-_86303440 BC095419	466579	-	HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18##AJ010278|TBX18|9096|T-box 18##NM_001204813|NT5E|4907|5'-nucleotidase, ecto (CD73)##NM_002526|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK314661|NT5E|4907|5'-nucleotidase, ecto (CD73)##X55740|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC015940|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK075008|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC065937|NT5E|4907|5'-nucleotidase, ecto (CD73)##DQ186653|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC046520|SNX14|57231|sorting nexin 14##AY044865|SNX14|57231|sorting nexin 14##BC095419|SNX14|57231|sorting nexin 14	0.986964	CTCF.p2:6:0.948
chr14	30006238	30006335	reg1024431.p1	5.957	+	TSC_hg19_v1_chr14_+_29241992 BX248251	-764291	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-769373	+	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	-770058	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	390568	-	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	1022074	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	1085238	+	BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1	0.99754	CTCF.p2:19:0.998
chr15	102080902	102081002	reg1021788.p2	5.957	+	TSC_hg19_v1_chr15_-_102030140 NM_002570 NM_138319 NM_138320 NM_138321 NM_138322 NM_138323 NM_138324 NM_138325	-50790	-	TSC_hg19_v1_chr15_-_102029995 M80482 M80482	-50919	-	TSC_hg19_v1_chr15_-_102029982 D87993 D87994 D87995	-50997	-	TSC_hg19_v1_chr15_-_102192580 BC006150 BC008873 AF353992 AK315584 AK297048 AK026257 AK296553 NM_025141 NM_078474	111514	-	TSC_hg19_v1_chr15_-_102264638 BC132671 BC136315 BC143943 AK056653 AX721055 NM_152334	183703	-	BC137002 BC137003 NM_001005326	264959	+	NM_002570|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138319|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138320|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138321|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138322|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138323|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138324|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138325|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87993|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87994|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87995|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##BC006150|TM2D3|80213|TM2 domain containing 3##BC008873|TM2D3|80213|TM2 domain containing 3##AF353992|TM2D3|80213|TM2 domain containing 3##AK315584|TM2D3|80213|TM2 domain containing 3##AK297048|TM2D3|80213|TM2 domain containing 3##AK026257|TM2D3|80213|TM2 domain containing 3##AK296553|TM2D3|80213|TM2 domain containing 3##NM_025141|TM2D3|80213|TM2 domain containing 3##NM_078474|TM2D3|80213|TM2 domain containing 3##BC132671|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC136315|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC143943|TARSL2|123283|threonyl-tRNA synthetase-like 2##AK056653|TARSL2|123283|threonyl-tRNA synthetase-like 2##NM_152334|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	0.674097	CTCF.p2:-16:0.674
chr15	49438334	49438443	reg1023385.p2	5.957	+	CU689588 AB385300 TSC_hg19_v1_chr15_-_49338644 D87445 AK307480 AK308183 BC008635 BC033001 NM_001193489 NM_014701	-99752	-	BC033907 NM_203349	-182748	-	TSC_hg19_v1_chr15_+_49170330 NM_014335 BC114944 BC114946 AK315365 AF092135 AF109873 AF349444 AK098383 AL109701 BC024151 AL357456 BC007944 AB527924 AF274951	-268016	+	AF120268 L40388 TSC_hg19_v1_chr15_-_49447811 AB462991 CR542063 CU680378 EU446744 EU831466 EU831553 AK222590 AB209799 AF100762 AF212227 AF084260 BC012629 AK312643 AK295598 NM_001143887 NM_004236	9421	-	TSC_hg19_v1_chr15_+_49447990 AF461816 AL832745 NM_001001556	9603	+	TSC_hg19_v1_chr15_+_49462423 NM_002044 AK301361 BC005141 AK098049 AK316440 M84443 BT006901 CU675015 DQ890583 DQ893742	24075	+	D87445|SECISBP2L|9728|SECIS binding protein 2-like##AK307480|SECISBP2L|9728|SECIS binding protein 2-like##AK308183|SECISBP2L|9728|SECIS binding protein 2-like##BC008635|SECISBP2L|9728|SECIS binding protein 2-like##BC033001|SECISBP2L|9728|SECIS binding protein 2-like##NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like##NM_014701|SECISBP2L|9728|SECIS binding protein 2-like##BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_014335|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114946|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK315365|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF092135|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF109873|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF349444|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK098383|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL109701|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC024151|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL357456|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC007944|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF120268|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##L40388|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##CR542063|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU446744|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831466|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831553|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK222590|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AB209799|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF100762|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF212227|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF084260|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##BC012629|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK312643|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK295598|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_001143887|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_004236|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF461816|GALK2|2585|galactokinase 2##AL832745|GALK2|2585|galactokinase 2##NM_001001556|GALK2|2585|galactokinase 2##NM_002044|GALK2|2585|galactokinase 2##AK301361|GALK2|2585|galactokinase 2##BC005141|GALK2|2585|galactokinase 2##AK098049|GALK2|2585|galactokinase 2##AK316440|GALK2|2585|galactokinase 2##M84443|GALK2|2585|galactokinase 2##BT006901|GALK2|2585|galactokinase 2##DQ890583|GALK2|2585|galactokinase 2##DQ893742|GALK2|2585|galactokinase 2	0.972724	CTCF.p2:10:0.973
chr7	148906786	148906917	reg1023441.p1	5.957	+	D30612 TSC_hg19_v1_chr7_+_148892683 NM_003575 AK299280 BC073805 AK316282 AB587508 BC055287 BC041704	-14162	+	TSC_hg19_v1_chr7_+_148844772 AY049744 AB527270 CU692152	-62092	+	TSC_hg19_v1_chr7_+_148844532 AK026380 NM_170686 BC043295 AK290499	-62322	+	TSC_hg19_v1_chr7_+_148936741 AK074821 NM_012256 BC022785 EU446738 CU692712	29943	+	TSC_hg19_v1_chr7_+_148959286 AK131504 NM_001195220 BC131569 AB528912	52469	+	AK098351 AK310453 AK310396 TSC_hg19_v1_chr7_+_148982401 AK303492	75535	+	D30612|ZNF282|8427|zinc finger protein 282##NM_003575|ZNF282|8427|zinc finger protein 282##AK299280|ZNF282|8427|zinc finger protein 282##BC073805|ZNF282|8427|zinc finger protein 282##AK316282|ZNF282|8427|zinc finger protein 282##BC055287|ZNF282|8427|zinc finger protein 282##BC041704|ZNF282|8427|zinc finger protein 282##AY049744|ZNF398|57541|zinc finger protein 398##AK026380|ZNF398|57541|zinc finger protein 398##NM_170686|ZNF398|57541|zinc finger protein 398##BC043295|ZNF398|57541|zinc finger protein 398##AK290499|ZNF398|57541|zinc finger protein 398##AK074821|ZNF212|7988|zinc finger protein 212##NM_012256|ZNF212|7988|zinc finger protein 212##BC022785|ZNF212|7988|zinc finger protein 212##EU446738|ZNF212|7988|zinc finger protein 212##NM_001195220|ZNF783|100289678|zinc finger family member 783##AK098351|LOC155060|155060|AI894139 pseudogene##AK310453|LOC155060|155060|AI894139 pseudogene##AK310396|LOC155060|155060|AI894139 pseudogene##AK303492|LOC155060|155060|AI894139 pseudogene	0.886704	CTCF.p2:3:0.887
chr9	136024970	136025091	reg1022286.p1	5.957	+	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	-344	-	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	-28531	-	NM_001807 S79774 M85201 BC042510 AK299965	-87655	+	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	14267	-	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	59590	-	AF134412 AF134413 AF134414 AF134415 AF134416 BC069595 BC069605 BC069814 BC111575 DQ139865 FR691751 FR691752 J05175 JN791441 CU686922 AK302203 TSC_hg19_v1_chr9_-_136150618	125584	-	AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B##AF134412|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134413|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134414|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134415|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134416|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069595|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069605|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069814|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC111575|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##DQ139865|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691751|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691752|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##J05175|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##JN791441|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AK302203|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)	0.964154	CTCF.p2:28:0.964
chrX	136037207	136037304	reg1020834.p3	5.957	+	TSC_hg19_v1_chrX_+_135991587 AK055694	-45699	+	TSC_hg19_v1_chrX_-_135962939 NM_001164803 NM_002139	-74320	-	TSC_hg19_v1_chrX_-_135962882 BC006550 BC007435 BX647131 AK091520 AK096015 AK304573 AK304868 AK309911	-74361	-	BC069439 NM_054021 CU686814	76580	-	TSC_hg19_v1_chrX_+_136648313 AF028706 NM_003413	611074	+	EU532020 TSC_hg19_v1_chrX_+_136648691 BC113393 BC113395 AB464363 HQ258447	611512	+	NM_001164803|RBMX|27316|RNA binding motif protein, X-linked##NM_002139|RBMX|27316|RNA binding motif protein, X-linked##BC006550|RBMX|27316|RNA binding motif protein, X-linked##BC007435|RBMX|27316|RNA binding motif protein, X-linked##BX647131|RBMX|27316|RNA binding motif protein, X-linked##AK091520|RBMX|27316|RNA binding motif protein, X-linked##AK096015|RBMX|27316|RNA binding motif protein, X-linked##AK304573|RBMX|27316|RNA binding motif protein, X-linked##AK304868|RBMX|27316|RNA binding motif protein, X-linked##AK309911|RBMX|27316|RNA binding motif protein, X-linked##BC069439|GPR101|83550|G protein-coupled receptor 101##NM_054021|GPR101|83550|G protein-coupled receptor 101##AF028706|ZIC3|7547|Zic family member 3##NM_003413|ZIC3|7547|Zic family member 3##EU532020|ZIC3|7547|Zic family member 3##BC113393|ZIC3|7547|Zic family member 3##BC113395|ZIC3|7547|Zic family member 3##HQ258447|ZIC3|7547|Zic family member 3	0.991356	CTCF.p2:-2:0.991
chr17	73236853	73236992	reg1026028.p1	5.956	+	TSC_hg19_v1_chr17_+_73201801 AK302426 AF514995 BC000697 AK297574 AK295694 AK022611 AK298519 AL833893 CU674344 AF498261	-35118	+	TSC_hg19_v1_chr17_+_73201533 NM_024844	-35360	+	TSC_hg19_v1_chr17_-_73179099 NM_001005849 NM_006937	-57814	-	TSC_hg19_v1_chr17_-_73257685 AK302423 AK304692 AK291685 AK296843 AF190864 D63876 AF219138 AF219139 AL833603 BC070044	20747	-	TSC_hg19_v1_chr17_-_73257688 AK293291 BC051732	20771	-	BC063285 TSC_hg19_v1_chr17_-_73257705 AK291651 NM_014001 NM_138619	20793	-	AK302426|NUP85|79902|nucleoporin 85kDa##AF514995|NUP85|79902|nucleoporin 85kDa##BC000697|NUP85|79902|nucleoporin 85kDa##AK297574|NUP85|79902|nucleoporin 85kDa##AK295694|NUP85|79902|nucleoporin 85kDa##AK022611|NUP85|79902|nucleoporin 85kDa##AK298519|NUP85|79902|nucleoporin 85kDa##AL833893|NUP85|79902|nucleoporin 85kDa##AF498261|NUP85|79902|nucleoporin 85kDa##NM_024844|NUP85|79902|nucleoporin 85kDa##NM_001005849|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##NM_006937|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##AK302423|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK304692|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK291685|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK296843|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AF190864|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##D63876|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AF219138|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AF219139|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AL833603|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##BC070044|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK293291|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##BC051732|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##BC063285|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK291651|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##NM_014001|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##NM_138619|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	0.782008	CTCF.p2:1:0.745
chr19	10582719	10582882	reg1024145.p1	5.956	+	TSC_hg19_v1_chr19_+_10563605 BC038234 NM_006202 BC019864	-19132	+	AF073745 NM_001111309	-39690	+	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	-41373	+	TSC_hg19_v1_chr19_-_10613392 BC002930 AF361886 D50922 NM_012289	30638	-	TSC_hg19_v1_chr19_-_10614033 NM_203500	31114	-	TSC_hg19_v1_chr19_-_10614085 AK056204	31362	-	BC038234|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_006202|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC019864|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AF073745|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111309|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC002930|KEAP1|9817|kelch-like ECH-associated protein 1##AF361886|KEAP1|9817|kelch-like ECH-associated protein 1##D50922|KEAP1|9817|kelch-like ECH-associated protein 1##NM_012289|KEAP1|9817|kelch-like ECH-associated protein 1##NM_203500|KEAP1|9817|kelch-like ECH-associated protein 1##AK056204|KEAP1|9817|kelch-like ECH-associated protein 1	0.994019	CTCF.p2:-2:0.994
chr5	172197699	172197826	reg1023056.p1	5.955	+	AF275799 TSC_hg19_v1_chr5_-_172083715	-114119	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-129509	+	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	-316259	-	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	449	-	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	63556	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	188686	+	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1	0.089407	
chr20	62917156	62917224	reg1010790.p2	5.954	+	TSC_hg19_v1_chr20_+_62887100 NM_001104925 NM_018257 BC040945 BC032332 AK001745 BC045775	-30029	+	AB020642 NM_004535 TSC_hg19_v1_chr20_+_62795840	-121357	+	TSC_hg19_v1_chr20_+_62795804 BC018917	-121400	+	None	None	None	None	None	None	None	None	None	NM_001104925|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##NM_018257|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC040945|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC032332|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##AK001745|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC045775|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##AB020642|MYT1|4661|myelin transcription factor 1##NM_004535|MYT1|4661|myelin transcription factor 1##BC018917|MYT1|4661|myelin transcription factor 1	0.510673	CTCF.p2:3:0.443
chrX	50490720	50490832	reg1023885.p1	5.954	+	TSC_hg19_v1_chrX_-_50386679 AY044234	-104099	-	TSC_hg19_v1_chrX_-_50213589 BC137319 BC137320 NM_001013742 AB183864	-277114	-	AJ314764 AJ314765 AJ314766 AJ416458 NM_033031 NM_033670	-463237	+	TSC_hg19_v1_chrX_-_50557118 AB033028 BC151240 NM_020717	66335	-	BC117264 BC117266 NM_005448 BC069155 HQ258214	162982	+	AF469196 NM_153183	584306	+	AY044234|SHROOM4|57477|shroom family member 4##BC137319|DGKK|139189|diacylglycerol kinase, kappa##BC137320|DGKK|139189|diacylglycerol kinase, kappa##NM_001013742|DGKK|139189|diacylglycerol kinase, kappa##AB183864|DGKK|139189|diacylglycerol kinase, kappa##AJ314764|CCNB3|85417|cyclin B3##AJ314765|CCNB3|85417|cyclin B3##AJ314766|CCNB3|85417|cyclin B3##AJ416458|CCNB3|85417|cyclin B3##NM_033031|CCNB3|85417|cyclin B3##NM_033670|CCNB3|85417|cyclin B3##AB033028|SHROOM4|57477|shroom family member 4##BC151240|SHROOM4|57477|shroom family member 4##NM_020717|SHROOM4|57477|shroom family member 4##BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10	0.895949	CTCF.p2:3:0.896
chr10	24672648	24672828	reg1024628.p2	5.953	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	-174644	+	AK091142 AX746804 NM_001098501 NM_019590 TSC_hg19_v1_chr10_+_24497850	-174950	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	-689061	+	TSC_hg19_v1_chr10_+_24755441 AK300422	82706	+	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	82731	+	AK307604 TSC_hg19_v1_chr10_-_25012174	339435	-	AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK091142|KIAA1217|56243|KIAA1217##NM_001098501|KIAA1217|56243|KIAA1217##NM_019590|KIAA1217|56243|KIAA1217##AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217##BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21	0.023467	
chr12	11775800	11775953	reg1028194.p2	5.953	+	BC044827 NM_006248	-227385	-	BC044827 K03205 K03206 BC141917 K03204 NM_005039 NM_199353 NM_199354 AX772842	-267360	-	BC130386 BC035362 K03207 NM_002723 BC128191	-312516	-	TSC_hg19_v1_chr12_+_11802659 AK289441	26797	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	26898	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	27110	+	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2##BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##K03205|PRB1|5542|proline-rich protein BstNI subfamily 1##K03206|PRB1|5542|proline-rich protein BstNI subfamily 1##BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1##K03204|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1##BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4##BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4##K03207|PRB4|5545|proline-rich protein BstNI subfamily 4##NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4##BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4##AK289441|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6	0.0	
chr19	1344900	1345029	reg1025710.p1	5.953	+	TSC_hg19_v1_chr19_+_1286081 AJ007292 NM_001405 AB463609	-58999	+	TSC_hg19_v1_chr19_+_1275540 NM_017914 BC000890 BC012080	-69397	+	CU674448 AB528491 EU176219 EU176522 AB451225 AB451348 BT007210 TSC_hg19_v1_chr19_+_1270968	-74015	+	TSC_hg19_v1_chr19_+_1354979 NM_032853 AK310721 U20897	10037	+	TSC_hg19_v1_chr19_+_1383882 AK092169 AX747389 NM_024407 AK128713	38922	+	AK293917 AK297611 TSC_hg19_v1_chr19_+_1383902 AF115969 AK091623 AK127759 AX747100	38936	+	AJ007292|EFNA2|1943|ephrin-A2##NM_001405|EFNA2|1943|ephrin-A2##NM_017914|C19orf24|55009|chromosome 19 open reading frame 24##BC000890|C19orf24|55009|chromosome 19 open reading frame 24##BC012080|C19orf24|55009|chromosome 19 open reading frame 24##EU176219|CIRBP|1153|cold inducible RNA binding protein##EU176522|CIRBP|1153|cold inducible RNA binding protein##AB451225|CIRBP|1153|cold inducible RNA binding protein##AB451348|CIRBP|1153|cold inducible RNA binding protein##BT007210|CIRBP|1153|cold inducible RNA binding protein##NM_032853|MUM1|84939|melanoma associated antigen (mutated) 1##AK310721|MUM1|84939|melanoma associated antigen (mutated) 1##U20897|MUM1|84939|melanoma associated antigen (mutated) 1##AK092169|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##NM_024407|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK128713|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK293917|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AF115969|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK091623|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK127759|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)	0.0	
chr14	54246682	54246775	reg1020685.p1	5.952	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-626678	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-626760	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-626855	-	NM_130851	174541	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	176805	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	616993	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.0	
chr1	46767830	46767945	reg1021241.p1	5.952	+	BC127783 TSC_hg19_v1_chr1_-_46767460	-472	-	TSC_hg19_v1_chr1_+_46713434 AK297204	-54448	+	TSC_hg19_v1_chr1_+_46713388 AK292611	-54501	+	TSC_hg19_v1_chr1_-_46768822 BC092479	947	-	TSC_hg19_v1_chr1_-_46768854 AK296436	967	-	TSC_hg19_v1_chr1_-_46768936 AF370430	1046	-	AK297204|RAD54L|8438|RAD54-like (S. cerevisiae)##AK292611|RAD54L|8438|RAD54-like (S. cerevisiae)##BC092479|LRRC41|10489|leucine rich repeat containing 41##AK296436|LRRC41|10489|leucine rich repeat containing 41##AF370430|LRRC41|10489|leucine rich repeat containing 41	0.0	
chr3	57419891	57420030	reg1027100.p1	5.952	+	AL832472 NM_001142733	-93251	-	AF403032 BC114953 NM_130387	-106981	-	TSC_hg19_v1_chr3_+_57261793 AK310716 BC010911 AF169797 AF424738 AB037849 AB587353 CU688526	-158116	+	AK126276 NM_178504 NM_198564	110108	-	TSC_hg19_v1_chr3_+_57542013 NM_177966 AK300374 BC034978 BX647169 AK074423 AB115695	122052	+	TSC_hg19_v1_chr3_+_57542054 EU832509 EU832590 EU832450	122171	+	AL832472|ASB14|142686|ankyrin repeat and SOCS box containing 14##NM_001142733|ASB14|142686|ankyrin repeat and SOCS box containing 14##AF403032|ASB14|142686|ankyrin repeat and SOCS box containing 14##BC114953|ASB14|142686|ankyrin repeat and SOCS box containing 14##NM_130387|ASB14|142686|ankyrin repeat and SOCS box containing 14##AK310716|APPL1|26060|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1##BC010911|APPL1|26060|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1##AF169797|APPL1|26060|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1##AF424738|APPL1|26060|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1##AB037849|APPL1|26060|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1##AK126276|DNAH12|201625|dynein, axonemal, heavy chain 12##NM_178504|DNAH12|201625|dynein, axonemal, heavy chain 12##NM_198564|DNAH12|201625|dynein, axonemal, heavy chain 12##NM_177966|PDE12|201626|phosphodiesterase 12##AK300374|PDE12|201626|phosphodiesterase 12##BC034978|PDE12|201626|phosphodiesterase 12##BX647169|PDE12|201626|phosphodiesterase 12##AK074423|PDE12|201626|phosphodiesterase 12##AB115695|PDE12|201626|phosphodiesterase 12##EU832509|PDE12|201626|phosphodiesterase 12##EU832590|PDE12|201626|phosphodiesterase 12##EU832450|PDE12|201626|phosphodiesterase 12	0.100114	
chr3	99550952	99551077	reg1024758.p1	5.952	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	-14269	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	-193564	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-930522	-	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	43977	-	BC017987 NM_001042459 NM_182909 AF329092 AX776292	282338	-	AK300704 NM_001167924	282759	+	AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like##AK300704|C3orf26|84319|chromosome 3 open reading frame 26##NM_001167924|C3orf26|84319|chromosome 3 open reading frame 26	0.997297	CTCF.p2:4:0.997
chr1	249106515	249106649	reg1025415.p1	5.951	+	NM_001004734 BC137188 BC137189	-260966	-	NM_001001824	-292398	-	NM_001001827 AB528813	-304023	-	AY358453 TSC_hg19_v1_chr1_-_249120082 AK056382 NM_030645	13526	-	TSC_hg19_v1_chr1_+_249132449 BC029310	25875	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	25963	+	NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##NM_001001824|OR2T27|403239|olfactory receptor, family 2, subfamily T, member 27##NM_001001827|OR2T35|403244|olfactory receptor, family 2, subfamily T, member 35##AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like##AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like##BC029310|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672	0.881486	CTCF.p2:-6:0.881
chr16	10915234	10915414	reg1021843.p2	5.951	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	-2776	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-77620	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-126559	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	55788	+	BC071683 TSC_hg19_v1_chr16_-_11036171	120842	-	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	120911	-	BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)	0.97888	CTCF.p2:49:0.979
chr16	15184912	15185024	reg1024090.p1	5.951	+	CU675948 AF092440 BC017336 NM_173474 AK300557 TSC_hg19_v1_chr16_-_15149897	-35091	-	AY203955 TSC_hg19_v1_chr16_+_15069016 DQ111782	-115936	+	AK299111 BC060871 TSC_hg19_v1_chr16_+_15068985	-115983	+	AB527833 AK300253 HQ258337 BC036182 AK314769 AK316520 BC132688 BC132690 BC104660 AJ272050 AF227156 NM_018427 AK225662	3160	-	TSC_hg19_v1_chr16_+_15489610 DQ004255 DQ004256 NM_001128423 NM_173803	304633	+	TSC_hg19_v1_chr16_+_15489637 AK096918 AK293380 BC061514	304682	+	AF092440|NTAN1|123803|N-terminal asparagine amidase##BC017336|NTAN1|123803|N-terminal asparagine amidase##NM_173474|NTAN1|123803|N-terminal asparagine amidase##AK300557|NTAN1|123803|N-terminal asparagine amidase##AY203955|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##DQ111782|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##AK299111|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC060871|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##HQ258337|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##DQ004255|MPV17L|255027|MPV17 mitochondrial membrane protein-like##DQ004256|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_001128423|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_173803|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK096918|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK293380|MPV17L|255027|MPV17 mitochondrial membrane protein-like##BC061514|MPV17L|255027|MPV17 mitochondrial membrane protein-like	0.701118	CTCF.p2:-20:0.701
chr16	1286726	1286827	reg1020486.p1	5.950	+	BC065923 AK308208 BC029356 NM_024164 BC074974	-6598	-	NM_012467 TSC_hg19_v1_chr16_-_1275269	-11515	-	AJ420779 TSC_hg19_v1_chr16_+_1203772	-83021	+	NM_003294 BC074974 BC074975 BC029356	3915	+	NM_012217 BC069143	19500	+	NM_194260 NM_194261	72377	+	BC065923|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##AK308208|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##BC029356|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##NM_024164|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##BC074974|TPSAB1|7177|tryptase alpha/beta 1##NM_012467|TPSG1|25823|tryptase gamma 1##AJ420779|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit##NM_003294|TPSAB1|7177|tryptase alpha/beta 1##BC074974|TPSAB1|7177|tryptase alpha/beta 1##BC074975|TPSAB1|7177|tryptase alpha/beta 1##BC029356|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##NM_012217|TPSD1|23430|tryptase delta 1##BC069143|TPSD1|23430|tryptase delta 1##NM_194260|UBE2I|7329|ubiquitin-conjugating enzyme E2I##NM_194261|UBE2I|7329|ubiquitin-conjugating enzyme E2I	0.846362	CTCF.p2:31:0.846
chr16	81919723	81919846	reg1022509.p1	5.950	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-106854	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-106882	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	-106887	+	BC019670 AK315652 AK026740 NM_145168	125284	-	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	149077	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	149148	+	BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.095446	
chr12	86036762	86036872	reg1024286.p1	5.949	+	U31986 TSC_hg19_v1_chr12_+_85673999 BC010923 NM_006982	-362858	+	AK022365 NM_001079910 BC005399 BC093088 AK307799	-606694	+	AK126325 NM_001100917	-606763	-	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	193228	-	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	193420	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	231309	+	U31986|ALX1|8092|ALX homeobox 1##BC010923|ALX1|8092|ALX homeobox 1##NM_006982|ALX1|8092|ALX homeobox 1##AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK126325|TSPAN19|144448|tetraspanin 19##NM_001100917|TSPAN19|144448|tetraspanin 19##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin	0.033082	
chr15	74436831	74436979	reg1022873.p1	5.949	+	TSC_hg19_v1_chr15_+_74422926 AY358316	-13973	+	NM_020851 AK290467 TSC_hg19_v1_chr15_+_74422912 AK092297 AX747460	-14076	+	NM_001130138	-14316	+	AK297730 TSC_hg19_v1_chr15_+_74466050 AB024536 AK000817 NM_005545	29160	+	TSC_hg19_v1_chr15_+_74466176 BC111013	29273	+	AK225606 AK223267 TSC_hg19_v1_chr15_+_74466899 AB003184 NM_201526 BC022478	29996	+	AY358316|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_020851|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AK290467|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AK092297|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130138|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AB024536|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##AK000817|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##NM_005545|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##BC111013|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##AK225606|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##AK223267|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##AB003184|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##NM_201526|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##BC022478|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat	0.219975	CTCF.p2:4:0.220
chr1	163329096	163329185	reg1020838.p1	5.948	+	NM_031423 NM_145697 TSC_hg19_v1_chr1_+_163291746 AK093348 AX748068 AF326731 BC008489 AB050577	-37364	+	TSC_hg19_v1_chr1_-_163291574 BC032239	-37579	-	TSC_hg19_v1_chr1_-_163172866 NM_003617	-156228	-	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	1199451	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	1199846	+	TSC_hg19_v1_chr1_+_164818083 AK022520	1488983	+	NM_031423|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_145697|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK093348|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AF326731|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC008489|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AB050577|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_003617|RGS5|8490|regulator of G-protein signaling 5##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1	0.996633	CTCF.p2:-14:0.997
chr12	925728	925880	reg1023427.p1	5.948	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	-63048	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	-63648	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-153089	-	BC013629 TSC_hg19_v1_chr12_+_1017145	91278	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	133022	-	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	174648	+	AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	0.0	
chr17	36478196	36478282	reg1020332.p2	5.948	+	TSC_hg19_v1_chr17_+_36453138 AK172741 AK225031 HQ258365 BC006235	-25102	+	NM_032351 AK293605 BC130382 BC130384 TSC_hg19_v1_chr17_+_36453120	-25185	+	BC067792 TSC_hg19_v1_chr17_-_36413224	-65002	-	AY584611 NM_001004334	21453	-	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	29624	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	106466	+	AK172741|MRPL45|84311|mitochondrial ribosomal protein L45##AK225031|MRPL45|84311|mitochondrial ribosomal protein L45##HQ258365|MRPL45|84311|mitochondrial ribosomal protein L45##BC006235|MRPL45|84311|mitochondrial ribosomal protein L45##NM_032351|MRPL45|84311|mitochondrial ribosomal protein L45##AK293605|MRPL45|84311|mitochondrial ribosomal protein L45##BC130382|MRPL45|84311|mitochondrial ribosomal protein L45##BC130384|MRPL45|84311|mitochondrial ribosomal protein L45##BC067792|LOC440434|440434|aminopeptidase puromycin sensitive pseudogene##AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23	0.988317	CTCF.p2:18:0.988
chr17	75490731	75490911	reg1000012.p1	5.948	+	AK056495 NM_001113495	-19497	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-43432	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-44039	+	TSC_hg19_v1_chr17_+_75543021 AK096234	52199	+	BC039479 NM_001142640 NM_018996	509461	+	TSC_hg19_v1_chr17_-_76124768 AK074065	633951	-	AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK074065|TMC6|11322|transmembrane channel-like 6	0.0	
chr19	52216068	52216207	reg1028354.p1	5.948	+	AY358369 AY854038 AK298284 NM_001098612	-66068	-	DQ892433 AF170484 BC029896 AK225753 U71383 NM_003830	-82480	-	NM_007147 BC007778 AK292687 BC052997 D50419	-141590	+	NM_001523 U59269 BC035837 AM904814	11095	-	M60626 S49810 M60627 BC005315 NM_001193306 NM_002029 AK314935	38993	-	NM_001005738 M88107 D10922 AK290557	48321	+	AY854038|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##AK298284|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##NM_001098612|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##DQ892433|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AF170484|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##BC029896|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AK225753|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##U71383|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_003830|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_007147|ZNF175|7728|zinc finger protein 175##BC007778|ZNF175|7728|zinc finger protein 175##AK292687|ZNF175|7728|zinc finger protein 175##BC052997|ZNF175|7728|zinc finger protein 175##D50419|ZNF175|7728|zinc finger protein 175##NM_001523|HAS1|3036|hyaluronan synthase 1##U59269|HAS1|3036|hyaluronan synthase 1##BC035837|HAS1|3036|hyaluronan synthase 1##AM904814|HAS1|3036|hyaluronan synthase 1##M60626|FPR1|2357|formyl peptide receptor 1##S49810|FPR1|2357|formyl peptide receptor 1##M60627|FPR1|2357|formyl peptide receptor 1##BC005315|FPR1|2357|formyl peptide receptor 1##NM_001193306|FPR1|2357|formyl peptide receptor 1##NM_002029|FPR1|2357|formyl peptide receptor 1##AK314935|FPR1|2357|formyl peptide receptor 1##NM_001005738|FPR2|2358|formyl peptide receptor 2##M88107|FPR2|2358|formyl peptide receptor 2##D10922|FPR2|2358|formyl peptide receptor 2##AK290557|FPR2|2358|formyl peptide receptor 2	0.040488	
chr20	6920730	6920882	reg1023601.p1	5.948	+	BC069214 NM_001200	-172062	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-816643	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-816929	-	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	1000296	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	1079494	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	1079601	-	BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4	0.995876	CTCF.p2:10:0.996
chr7	26324771	26324918	reg1025634.p1	5.948	+	TSC_hg19_v1_chr7_+_26242052 AF086270	-82787	+	TSC_hg19_v1_chr7_+_26241400 BX647444 AF136630	-83454	+	TSC_hg19_v1_chr7_+_26241368 BX648807	-83495	+	TSC_hg19_v1_chr7_+_26331538 NM_001199835 NM_013322 AK316088 BC034992	6677	+	TSC_hg19_v1_chr7_+_26331633 BC031050 AK312850 AK296142	6803	+	NM_001199837 AK307905	75684	+	BX647444|CBX3|11335|chromobox homolog 3##AF136630|CBX3|11335|chromobox homolog 3##BX648807|CBX3|11335|chromobox homolog 3##NM_001199835|SNX10|29887|sorting nexin 10##NM_013322|SNX10|29887|sorting nexin 10##AK316088|SNX10|29887|sorting nexin 10##BC034992|SNX10|29887|sorting nexin 10##BC031050|SNX10|29887|sorting nexin 10##AK312850|SNX10|29887|sorting nexin 10##AK296142|SNX10|29887|sorting nexin 10##NM_001199837|SNX10|29887|sorting nexin 10##AK307905|SNX10|29887|sorting nexin 10	0.0	
chr13	26403975	26404088	reg1024383.p1	5.947	+	AK302980 TSC_hg19_v1_chr13_+_26042965	-361066	+	TSC_hg19_v1_chr13_+_26042926 AK126031	-361102	+	TSC_hg19_v1_chr13_+_25946121 AK127263 NM_016529	-457879	+	BC132898 BC137092 AY358775 NM_001007538	221149	-	AL133621 TSC_hg19_v1_chr13_-_26789203	385104	-	TSC_hg19_v1_chr13_-_26795853 AY009109 NM_183044	391826	-	AK302980|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK126031|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK127263|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##NM_016529|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##BC132898|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##BC137092|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AY358775|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##NM_001007538|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AL133621|RNF6|6049|ring finger protein (C3H2C3 type) 6##AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6	0.0	
chr5	31664859	31664978	reg1019662.p1	5.947	+	TSC_hg19_v1_chr5_+_31639424 AB002298	-25448	+	NM_018356 TSC_hg19_v1_chr5_+_31532398 BC032845 AK299156 AK002055 BC021215 AB527598	-132483	+	TSC_hg19_v1_chr5_-_31532201 AK308093 AF189011 BC054003 BX647724 NM_001100412 NM_013235	-132696	-	NM_178140	134112	+	TSC_hg19_v1_chr5_+_32173523 AK055939	508598	+	TSC_hg19_v1_chr5_-_32174291 AJ296152	509350	-	AB002298|PDZD2|23037|PDZ domain containing 2##NM_018356|C5orf22|55322|chromosome 5 open reading frame 22##BC032845|C5orf22|55322|chromosome 5 open reading frame 22##AK299156|C5orf22|55322|chromosome 5 open reading frame 22##AK002055|C5orf22|55322|chromosome 5 open reading frame 22##BC021215|C5orf22|55322|chromosome 5 open reading frame 22##AK308093|DROSHA|29102|drosha, ribonuclease type III##AF189011|DROSHA|29102|drosha, ribonuclease type III##BC054003|DROSHA|29102|drosha, ribonuclease type III##BX647724|DROSHA|29102|drosha, ribonuclease type III##NM_001100412|DROSHA|29102|drosha, ribonuclease type III##NM_013235|DROSHA|29102|drosha, ribonuclease type III##NM_178140|PDZD2|23037|PDZ domain containing 2##AK055939|LOC153546|153546|uncharacterized LOC153546##AJ296152|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)	1.674125	CTCF.p2:-45:0.841	CTCF.p2:46:0.776
chr9	114854217	114854331	reg1024344.p1	5.947	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-194807	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-195160	+	AL833535 NM_173521	-308499	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	83246	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	241013	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	241575	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.016627	
chr1	228659644	228659755	reg1024167.p2	5.946	+	AK091220 NM_175055 BC100855 BC100856 BC100857 BC100858 BC137467 BC137468	-13892	+	AB590632 BC082269 BC001193 NM_033445 AK311930 TSC_hg19_v1_chr1_-_228645575	-14153	-	BC069079 CR542013 NM_003493 AK312217 BC101837 BC101839	-46650	-	TSC_hg19_v1_chr1_+_228675088 NM_001010858 BC012758	15376	+	AK055963 TSC_hg19_v1_chr1_+_228783500	123732	+	TSC_hg19_v1_chr1_+_228870806 NM_021205 AF211836	211145	+	AK091220|HIST3H2BB|128312|histone cluster 3, H2bb##NM_175055|HIST3H2BB|128312|histone cluster 3, H2bb##BC100855|HIST3H2BB|128312|histone cluster 3, H2bb##BC100856|HIST3H2BB|128312|histone cluster 3, H2bb##BC100857|HIST3H2BB|128312|histone cluster 3, H2bb##BC100858|HIST3H2BB|128312|histone cluster 3, H2bb##BC137467|HIST3H2BB|128312|histone cluster 3, H2bb##BC137468|HIST3H2BB|128312|histone cluster 3, H2bb##BC082269|HIST3H2A|92815|histone cluster 3, H2a##BC001193|HIST3H2A|92815|histone cluster 3, H2a##NM_033445|HIST3H2A|92815|histone cluster 3, H2a##AK311930|HIST3H2A|92815|histone cluster 3, H2a##BC069079|HIST3H3|8290|histone cluster 3, H3##CR542013|HIST3H3|8290|histone cluster 3, H3##NM_003493|HIST3H3|8290|histone cluster 3, H3##AK312217|HIST3H3|8290|histone cluster 3, H3##BC101837|HIST3H3|8290|histone cluster 3, H3##BC101839|HIST3H3|8290|histone cluster 3, H3##NM_001010858|RNF187|149603|ring finger protein 187##BC012758|RNF187|149603|ring finger protein 187##AK055963|DUSP5P|574029|dual specificity phosphatase 5 pseudogene##NM_021205|RHOU|58480|ras homolog gene family, member U##AF211836|RHOU|58480|ras homolog gene family, member U	0.053199	
chr16	74141824	74141930	reg1022121.p2	5.946	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-1049291	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-1059656	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-1150172	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	188816	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	188894	+	TSC_hg19_v1_chr16_-_74401811 AK124154	259935	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.990514	CTCF.p2:-10:0.991
chr3	107262715	107262834	reg1025412.p1	5.946	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-20925	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-166464	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-303182	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	547099	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	678518	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	752627	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.010312	
chr4	139416177	139416332	reg1025082.p2	5.946	+	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	-252890	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-962612	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-962662	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	520739	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	589149	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	589357	-	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.0	
chr5	72989487	72989601	reg1024943.p1	5.946	+	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	-67559	+	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	-127962	+	BC012917 TSC_hg19_v1_chr5_-_72861465 AF251051 NM_023039	-128085	-	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	119806	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	946919	-	AK096578 NM_003633	947704	-	AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##BC012917|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AF251051|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##NM_023039|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)	0.908688	CTCF.p2:11:0.909
chr10	90551821	90551926	reg1022782.p1	5.944	+	EF426483 NM_001102469	-30711	+	AB528790 EF426482 NM_001080518	-67573	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	-127693	+	EF426484 NM_001128215	10613	+	AX721211 NM_144590	59830	-	TSC_hg19_v1_chr10_+_90640003 AK056086 BC010846 NM_020799	88105	+	EF426483|LIPN|643418|lipase, family member N##NM_001102469|LIPN|643418|lipase, family member N##EF426482|LIPK|643414|lipase, family member K##NM_001080518|LIPK|643414|lipase, family member K##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric##EF426484|LIPM|340654|lipase, family member M##NM_001128215|LIPM|340654|lipase, family member M##NM_144590|ANKRD22|118932|ankyrin repeat domain 22##AK056086|STAMBPL1|57559|STAM binding protein-like 1##BC010846|STAMBPL1|57559|STAM binding protein-like 1##NM_020799|STAMBPL1|57559|STAM binding protein-like 1	0.165324	
chr13	22199645	22199757	reg1022186.p1	5.944	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-21341	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-21392	-	TSC_hg19_v1_chr13_-_22033510 BC067898 NM_153251 BC034944	-166194	-	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	45447	+	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	1555414	+	TSC_hg19_v1_chr13_-_23949652 AK125458	1749949	-	NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##BC067898|ZDHHC20|253832|zinc finger, DHHC-type containing 20##NM_153251|ZDHHC20|253832|zinc finger, DHHC-type containing 20##BC034944|ZDHHC20|253832|zinc finger, DHHC-type containing 20##AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.620699	CTCF.p2:0:0.621
chr16	87450487	87450578	reg1023178.p1	5.944	+	TSC_hg19_v1_chr16_+_87425998 AF303888 AM393561 DQ893152 DQ896448 AB528176 AL834298	-24518	+	TSC_hg19_v1_chr16_+_87425947 AK025556 BC067797 BC018634	-24569	+	TSC_hg19_v1_chr16_+_87425938 AK290956 BC048009 AK310224 AK310335 AF087871 AF183417	-24623	+	AB011151 AB384500 NM_015144 AB030243 BC101478	74858	-	AB593088 TSC_hg19_v1_chr16_+_87636492 NM_020655 BC036533	185969	+	TSC_hg19_v1_chr16_+_87636574 AB042636	186046	+	AF303888|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AM393561|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ893152|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ896448|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AL834298|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK025556|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC067797|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC018634|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK290956|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC048009|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK310224|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK310335|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AF087871|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AF183417|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AB011151|ZCCHC14|23174|zinc finger, CCHC domain containing 14##NM_015144|ZCCHC14|23174|zinc finger, CCHC domain containing 14##AB030243|ZCCHC14|23174|zinc finger, CCHC domain containing 14##BC101478|ZCCHC14|23174|zinc finger, CCHC domain containing 14##NM_020655|JPH3|57338|junctophilin 3##BC036533|JPH3|57338|junctophilin 3##AB042636|JPH3|57338|junctophilin 3	0.78105	CTCF.p2:-1:0.781
chrX	110235988	110236103	reg1023359.p1	5.944	+	AK290504 NM_001128166 NM_001128167 TSC_hg19_v1_chrX_+_110187624 AK315284	-48498	+	NM_001143981 NM_001143982 NM_001143983	-196760	-	BC002909 AK293106 AK297563 AK312270 NM_145234	-197012	-	NM_002578 TSC_hg19_v1_chrX_+_110339395	103356	+	NM_001128168 NM_001128172 NM_001128173 AB102659 AF068864 AM943850 AM943851 AM943852	130272	+	TSC_hg19_v1_chrX_-_110513712 AF029232 AK312701	277659	-	AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001143981|CHRDL1|91851|chordin-like 1##NM_001143982|CHRDL1|91851|chordin-like 1##NM_001143983|CHRDL1|91851|chordin-like 1##BC002909|CHRDL1|91851|chordin-like 1##AK293106|CHRDL1|91851|chordin-like 1##AK297563|CHRDL1|91851|chordin-like 1##AK312270|CHRDL1|91851|chordin-like 1##NM_145234|CHRDL1|91851|chordin-like 1##NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128168|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128172|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128173|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AB102659|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AF068864|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943850|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943851|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943852|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AF029232|CAPN6|827|calpain 6##AK312701|CAPN6|827|calpain 6	0.992853	CTCF.p2:-11:0.993
chr10	89621423	89621566	reg1023556.p1	5.943	+	TSC_hg19_v1_chr10_-_89577921 AK075223 NM_032810	-43592	-	TSC_hg19_v1_chr10_+_89419623 NM_001015880 NM_004670 BC009894 AK312556 AF091242 AF150754 AF074331 AF173365 DQ893625 DQ895430 AF313907	-201949	+	AK309176 NM_001178118	-353905	+	EU552092 NM_001126049	1699	-	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	1732	+	TSC_hg19_v1_chr10_+_89623380 BC005821	1895	+	AK075223|ATAD1|84896|ATPase family, AAA domain containing 1##NM_032810|ATAD1|84896|ATPase family, AAA domain containing 1##NM_001015880|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##NM_004670|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##BC009894|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK312556|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF091242|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF150754|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF074331|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF173365|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ893625|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ895430|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF313907|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK309176|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178118|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##EU552092|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_001126049|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog	0.0	
chr4	169843091	169843198	reg1022117.p2	5.943	+	TSC_hg19_v1_chr4_+_169753245 NM_001166110 AB023209	-89967	+	TSC_hg19_v1_chr4_+_169552755 NM_001166109 AK095512	-290348	+	TSC_hg19_v1_chr4_+_169418204 AF464873 NM_001166108 NM_016081 BC140850 BC144666	-424924	+	BC021973 BC033650 TSC_hg19_v1_chr4_-_169931407 AK027337 AK291756 AK299847 AL833393 NM_032783	88314	-	BC041023 TSC_hg19_v1_chr4_-_170077830	234675	-	TSC_hg19_v1_chr4_-_170192099 BC053671	348903	-	NM_001166110|PALLD|23022|palladin, cytoskeletal associated protein##AB023209|PALLD|23022|palladin, cytoskeletal associated protein##NM_001166109|PALLD|23022|palladin, cytoskeletal associated protein##AK095512|PALLD|23022|palladin, cytoskeletal associated protein##AF464873|PALLD|23022|palladin, cytoskeletal associated protein##NM_001166108|PALLD|23022|palladin, cytoskeletal associated protein##NM_016081|PALLD|23022|palladin, cytoskeletal associated protein##BC140850|PALLD|23022|palladin, cytoskeletal associated protein##BC144666|PALLD|23022|palladin, cytoskeletal associated protein##BC021973|CBR4|84869|carbonyl reductase 4##BC033650|CBR4|84869|carbonyl reductase 4##AK027337|CBR4|84869|carbonyl reductase 4##AK291756|CBR4|84869|carbonyl reductase 4##AL833393|CBR4|84869|carbonyl reductase 4##NM_032783|CBR4|84869|carbonyl reductase 4##BC041023|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1	0.289766	CTCF.p2:13:0.290
chr6_mann_hap4	2907769	2907881	reg1024916.p1	5.943	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.586768	CTCF.p2:7:0.587
chr7	79689678	79689792	reg1023748.p2	5.943	+	TSC_hg19_v1_chr7_+_79083303 AK311103	-606578	+	AB014605 BC150277 AK297353 AF038563 NM_012301	-606856	-	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-2220226	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	74404	+	NM_001102386 BC147016 BC147017	451547	-	NM_001001547 AK129899 AK300101 AK312920	541786	+	AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##NM_001102386|GNAT3|346562|guanine nucleotide binding protein, alpha transducing 3##BC147016|GNAT3|346562|guanine nucleotide binding protein, alpha transducing 3##BC147017|GNAT3|346562|guanine nucleotide binding protein, alpha transducing 3##NM_001001547|CD36|948|CD36 molecule (thrombospondin receptor)##AK129899|CD36|948|CD36 molecule (thrombospondin receptor)##AK300101|CD36|948|CD36 molecule (thrombospondin receptor)##AK312920|CD36|948|CD36 molecule (thrombospondin receptor)	0.926606	CTCF.p2:-8:0.927
chr1	47557281	47557393	reg1022106.p1	5.941	+	AY358631 AK292175 AY262056 NM_178134 AB527374	-24233	+	BC028102 NM_178033 AK098065 AY358537 AM040940 DQ891655 DQ891656 DQ894843 EU176287 CU688398	-67974	+	TSC_hg19_v1_chr1_-_47407149 BC022851 NM_000778	-150189	-	TSC_hg19_v1_chr1_+_47603114 BC148248 AY280371 NM_001010969 BC142690 BC142607 AY280372	45785	+	CR450304 CU680280 BC012303 TSC_hg19_v1_chr1_-_47655693	98311	-	TSC_hg19_v1_chr1_-_47655728 NM_005764	98409	-	AY358631|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##AK292175|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##AY262056|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##NM_178134|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##BC028102|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##NM_178033|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AK098065|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AY358537|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AM040940|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891655|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891656|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ894843|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##EU176287|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##BC022851|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##NM_000778|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC148248|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280371|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##NM_001010969|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142690|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142607|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280372|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##CR450304|PDZK1IP1|10158|PDZK1 interacting protein 1##BC012303|PDZK1IP1|10158|PDZK1 interacting protein 1##NM_005764|PDZK1IP1|10158|PDZK1 interacting protein 1	0.845303	CTCF.p2:19:0.845
chr22	25794565	25794684	reg1024743.p1	5.941	+	BC139736 NM_001135772	-17081	-	AL137651 NM_182492	-36101	-	NM_000496	-179013	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	49452	+	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	166175	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	166322	+	BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_000496|CRYBB2|1415|crystallin, beta B2##BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2	0.111618	
chr3	42578057	42578157	reg1022461.p1	5.941	+	TSC_hg19_v1_chr3_+_42544134 AK298115 AK314334 L13288 BC064424 X75299 AB590664 EF577396	-33928	+	TSC_hg19_v1_chr3_+_42544108 AK294609 NM_001251883 NM_001251884 NM_001251885 NM_004624 AK293548	-34000	+	AK056819 NM_001251882	-47317	+	TSC_hg19_v1_chr3_-_42623460 BC006178 BC018437 AY359041 AK292856 AK293133 AK074576 NM_001201584 NM_004206 NM_032970	45354	-	NM_016305 AF201950 TSC_hg19_v1_chr3_+_42632337	54210	+	TSC_hg19_v1_chr3_+_42632351 BC017804 AK312225 DQ891965 EU176663 BC020444	54272	+	AK298115|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK314334|VIPR1|7433|vasoactive intestinal peptide receptor 1##L13288|VIPR1|7433|vasoactive intestinal peptide receptor 1##BC064424|VIPR1|7433|vasoactive intestinal peptide receptor 1##X75299|VIPR1|7433|vasoactive intestinal peptide receptor 1##EF577396|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK294609|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251883|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251884|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251885|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_004624|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK293548|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK056819|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251882|VIPR1|7433|vasoactive intestinal peptide receptor 1##BC006178|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##BC018437|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AY359041|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK292856|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK293133|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK074576|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_001201584|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_004206|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_032970|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_016305|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##AF201950|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##BC017804|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##AK312225|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##DQ891965|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##EU176663|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##BC020444|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2	0.99582	CTCF.p2:-7:0.996
chr4	10717929	10718038	reg1025637.p1	5.941	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-31582	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-258973	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-599447	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	712549	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2767968	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2767992	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.208035	CTCF.p2:9:0.208
chr9	29830959	29831068	reg1022964.p1	5.941	+	AK056372 NM_152570	-1111711	-	AK057806 JN681271 NM_145005	-2257172	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-2257542	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	2553577	+	TSC_hg19_v1_chr9_+_32384622 AK057904	2553614	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	2553636	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.325406	CTCF.p2:3:0.315
chr3	107472494	107472619	reg1024449.p1	5.940	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-230707	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-376246	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-512964	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	337317	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	468736	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	542845	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.692886	CTCF.p2:-5:0.693
chr1	28266960	28267097	reg1024749.p1	5.939	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-5467	+	TSC_hg19_v1_chr1_-_28241258 BC021257 NM_002946	-25764	-	CR450348 DQ892352 DQ895821 TSC_hg19_v1_chr1_-_28241083 J05249 BC001630 AK300691 AK312956 AK296898 AK298759 BC012157	-25979	-	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	19490	+	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	148096	-	NM_000952 NM_001164723	236426	-	NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC021257|RPA2|6118|replication protein A2, 32kDa##NM_002946|RPA2|6118|replication protein A2, 32kDa##CR450348|RPA2|6118|replication protein A2, 32kDa##DQ892352|RPA2|6118|replication protein A2, 32kDa##DQ895821|RPA2|6118|replication protein A2, 32kDa##J05249|RPA2|6118|replication protein A2, 32kDa##BC001630|RPA2|6118|replication protein A2, 32kDa##AK300691|RPA2|6118|replication protein A2, 32kDa##AK312956|RPA2|6118|replication protein A2, 32kDa##AK298759|RPA2|6118|replication protein A2, 32kDa##BC012157|RPA2|6118|replication protein A2, 32kDa##AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor	0.0	
chr6	116731045	116731226	reg1023161.p1	5.939	+	TSC_hg19_v1_chr6_-_116692863 AK298559 AK316303	-38266	-	TSC_hg19_v1_chr6_+_116692109 NM_013352 AF098066	-38992	+	BC039245 NM_001080976 BC043526	-129814	+	NM_001010919	51420	+	BC032556 NM_153711 AK094140 AK315572	101686	+	AK300309 AY358252 NM_153036 BC057769 AK056801	119073	+	AK298559|LOC100287467|100287467|uncharacterized LOC100287467##AK316303|LOC100287467|100287467|uncharacterized LOC100287467##NM_013352|DSE|29940|dermatan sulfate epimerase##AF098066|DSE|29940|dermatan sulfate epimerase##BC039245|DSE|29940|dermatan sulfate epimerase##NM_001080976|DSE|29940|dermatan sulfate epimerase##BC043526|DSE|29940|dermatan sulfate epimerase##NM_001010919|FAM26F|441168|family with sequence similarity 26, member F##BC032556|FAM26E|254228|family with sequence similarity 26, member E##NM_153711|FAM26E|254228|family with sequence similarity 26, member E##AK094140|FAM26E|254228|family with sequence similarity 26, member E##AK315572|FAM26E|254228|family with sequence similarity 26, member E##AK300309|FAM26D|221301|family with sequence similarity 26, member D##AY358252|FAM26D|221301|family with sequence similarity 26, member D##NM_153036|FAM26D|221301|family with sequence similarity 26, member D##BC057769|FAM26D|221301|family with sequence similarity 26, member D##AK056801|FAM26D|221301|family with sequence similarity 26, member D	0.0	
chr6_qbl_hap6	1657668	1657784	reg1025356.p2	5.939	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.778878	CTCF.p2:13:0.779
chr16	23812672	23812852	reg1000124.p1	5.938	+	AF146019 NM_022097 AK313062	-46743	+	AK131280 NM_033266	-87942	-	GQ129249 GQ129250 TSC_hg19_v1_chr16_-_23724544 AK309313 AK310834 EF560720 EF560739 AB047079	-88225	-	TSC_hg19_v1_chr16_+_23847303 NM_002738 NM_212535	34532	+	TSC_hg19_v1_chr16_+_23847321 BC036472	34570	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	34633	+	AF146019|CHP2|63928|calcineurin B homologous protein 2##NM_022097|CHP2|63928|calcineurin B homologous protein 2##AK313062|CHP2|63928|calcineurin B homologous protein 2##AK131280|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##NM_033266|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##GQ129249|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##GQ129250|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AK309313|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AK310834|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##EF560720|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##EF560739|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AB047079|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##NM_002738|PRKCB|5579|protein kinase C, beta##NM_212535|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta	0.0	
chr17	20923659	20923781	reg1022878.p1	5.938	+	CU686685 BC068597 NM_001004306	-124328	-	AK057473 TSC_hg19_v1_chr17_+_20771859 BC041488 EF565107	-151915	+	NM_001190790	-440684	+	TSC_hg19_v1_chr17_-_20946322 AB590105 AB028986 NM_015276	22552	-	TSC_hg19_v1_chr17_+_20978860 AB593144	55161	+	TSC_hg19_v1_chr17_+_21030251 NM_015510 AL117567 AF151851 BC004126 BC009679 AK124055 CR457124	106556	+	BC068597|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001004306|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2##AB028986|USP22|23326|ubiquitin specific peptidase 22##NM_015276|USP22|23326|ubiquitin specific peptidase 22##NM_015510|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AL117567|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AF151851|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC004126|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC009679|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AK124055|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##CR457124|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	0.423156	CTCF.p2:-30:0.275
chr20	58509144	58509301	reg1023256.p1	5.938	+	AK125073 NM_001190826	-404	+	BX648091 BX649108 BC146798 TSC_hg19_v1_chr20_-_58508726	-515	-	BC132864 BC132870 NM_014258	-2032	-	TSC_hg19_v1_chr20_-_58515355 BC047502 NM_006242	6102	-	TSC_hg19_v1_chr20_+_58515434 AK304220 NM_001190827 NM_022106 BC020771 BC054002	6266	+	NM_177980 AK055202	24253	+	AK125073|C20orf177|63939|chromosome 20 open reading frame 177##NM_001190826|C20orf177|63939|chromosome 20 open reading frame 177##BX648091|SYCP2|10388|synaptonemal complex protein 2##BX649108|SYCP2|10388|synaptonemal complex protein 2##BC146798|SYCP2|10388|synaptonemal complex protein 2##BC132864|SYCP2|10388|synaptonemal complex protein 2##BC132870|SYCP2|10388|synaptonemal complex protein 2##NM_014258|SYCP2|10388|synaptonemal complex protein 2##BC047502|PPP1R3D|5509|protein phosphatase 1, regulatory subunit 3D##NM_006242|PPP1R3D|5509|protein phosphatase 1, regulatory subunit 3D##AK304220|C20orf177|63939|chromosome 20 open reading frame 177##NM_001190827|C20orf177|63939|chromosome 20 open reading frame 177##NM_022106|C20orf177|63939|chromosome 20 open reading frame 177##BC020771|C20orf177|63939|chromosome 20 open reading frame 177##BC054002|C20orf177|63939|chromosome 20 open reading frame 177##NM_177980|CDH26|60437|cadherin 26##AK055202|CDH26|60437|cadherin 26	0.97921	CTCF.p2:6:0.979
chr8	96978895	96979025	reg1025246.p2	5.938	+	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	-697495	-	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	-697909	+	TSC_hg19_v1_chr8_+_96146116 AK023249	-832824	+	BC127948 BC127947 AJ537424 NM_001001557	194021	-	CR542176 CR542196 TSC_hg19_v1_chr8_-_97247774 AK307085 NM_001199975 BC041005 AK295007 AK311756 M22348 X13585 M26700 BC005230 NM_006294	268849	-	BC012995 NM_015942 TSC_hg19_v1_chr8_-_97273837 AK309002	294857	-	BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6##CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_001199975|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC012995|MTERFD1|51001|MTERF domain containing 1##NM_015942|MTERFD1|51001|MTERF domain containing 1##AK309002|MTERFD1|51001|MTERF domain containing 1	0.994635	CTCF.p2:9:0.995
chr2	129991764	129991874	reg1026943.p1	5.937	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-915519	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-1063772	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-1142958	+	NM_032144 AL136727	745416	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	895039	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	910792	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.927204	CTCF.p2:12:0.927
chr5	145429120	145429256	reg1027794.p1	5.937	+	TSC_hg19_v1_chr5_+_145317317 AL833297	-111820	+	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	-113017	+	NM_001080516	-176658	-	HQ258084 BC130586 BC130588 BC144387 BC144388 BC144389 BC144392 NM_001029869	54723	-	U56252 TSC_hg19_v1_chr5_-_145523016	93821	-	TSC_hg19_v1_chr5_-_145562187 BC131798 BC110084 D84223 BC151214 AK304134 BC068041 AK293750 AK025441 AK295874 AF151026 BC105581 AK315178 BC150213	132951	-	AL833297|SH3RF2|153769|SH3 domain containing ring finger 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2##NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##HQ258084|PLAC8L1|153770|PLAC8-like 1##BC130586|PLAC8L1|153770|PLAC8-like 1##BC130588|PLAC8L1|153770|PLAC8-like 1##BC144387|PLAC8L1|153770|PLAC8-like 1##BC144388|PLAC8L1|153770|PLAC8-like 1##BC144389|PLAC8L1|153770|PLAC8-like 1##BC144392|PLAC8L1|153770|PLAC8-like 1##NM_001029869|PLAC8L1|153770|PLAC8-like 1##U56252|LARS|51520|leucyl-tRNA synthetase##BC131798|LARS|51520|leucyl-tRNA synthetase##BC110084|LARS|51520|leucyl-tRNA synthetase##D84223|LARS|51520|leucyl-tRNA synthetase##BC151214|LARS|51520|leucyl-tRNA synthetase##AK304134|LARS|51520|leucyl-tRNA synthetase##BC068041|LARS|51520|leucyl-tRNA synthetase##AK293750|LARS|51520|leucyl-tRNA synthetase##AK025441|LARS|51520|leucyl-tRNA synthetase##AK295874|LARS|51520|leucyl-tRNA synthetase##AF151026|LARS|51520|leucyl-tRNA synthetase##BC105581|LARS|51520|leucyl-tRNA synthetase##AK315178|LARS|51520|leucyl-tRNA synthetase##BC150213|LARS|51520|leucyl-tRNA synthetase	0.260453	CTCF.p2:-1:0.260
chr6	144903100	144903222	reg1023370.p1	5.937	+	NM_007124 X69086	-290243	+	TSC_hg19_v1_chr6_+_144607461 AK292506	-295681	+	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	-431440	+	AK124757 TSC_hg19_v1_chr6_+_146056061	1152873	+	TSC_hg19_v1_chr6_-_146056437 AJ130763 AJ130764	1153252	-	AF454494 TSC_hg19_v1_chr6_-_146056628 AF454493 BC005286 AF084535	1153440	-	NM_007124|UTRN|7402|utrophin##X69086|UTRN|7402|utrophin##AK292506|UTRN|7402|utrophin##NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11##AK124757|LOC100507557|100507557|uncharacterized LOC100507557##AJ130763|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AJ130764|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454494|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454493|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##BC005286|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF084535|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	0.420867	CTCF.p2:-30:0.360
chr9	98224921	98225101	reg1022044.p2	5.937	+	AK312548 AK222871 TSC_hg19_v1_chr9_-_98079974 BC015748 X66893 AK304887 NM_000136 NM_001243744	-145080	-	X66894 NM_001243743	-145491	-	AK298959 TSC_hg19_v1_chr9_+_97766501 AK300486	-458536	+	TSC_hg19_v1_chr9_-_98268874 AB209495 AB233423 AB233424 CU692174	43862	-	AB189440 NM_001083607	44469	-	TSC_hg19_v1_chr9_-_98269686 NM_001083606 U43148	44689	-	AK312548|FANCC|2176|Fanconi anemia, complementation group C##AK222871|FANCC|2176|Fanconi anemia, complementation group C##BC015748|FANCC|2176|Fanconi anemia, complementation group C##X66893|FANCC|2176|Fanconi anemia, complementation group C##AK304887|FANCC|2176|Fanconi anemia, complementation group C##NM_000136|FANCC|2176|Fanconi anemia, complementation group C##NM_001243744|FANCC|2176|Fanconi anemia, complementation group C##X66894|FANCC|2176|Fanconi anemia, complementation group C##NM_001243743|FANCC|2176|Fanconi anemia, complementation group C##AK298959|C9orf3|84909|chromosome 9 open reading frame 3##AK300486|C9orf3|84909|chromosome 9 open reading frame 3##AB209495|PTCH1|5727|patched 1##AB233423|PTCH1|5727|patched 1##AB233424|PTCH1|5727|patched 1##AB189440|PTCH1|5727|patched 1##NM_001083607|PTCH1|5727|patched 1##NM_001083606|PTCH1|5727|patched 1##U43148|PTCH1|5727|patched 1	0.0	
chr10	28468564	28468671	reg1022403.p1	5.936	+	AK292521 TSC_hg19_v1_chr10_-_28287879 AK001679 NM_018076 BC085611	-180733	-	BC036207 TSC_hg19_v1_chr10_-_28034752 AK125339 NM_001242702 NM_173576	-433856	-	TSC_hg19_v1_chr10_+_27793232 AY574034 AK295443 AK297629 AK299457 BC029350 AF087860 BC015014 NM_021252 AL136734 AK223153 AB464117 AF137372 AF498950 AK001555 AM393142 BT009840 CR533455 CU677165	-675388	+	BC038105 AK057360 NM_173496	102423	-	TSC_hg19_v1_chr10_-_28591994 AK315046 AK301592	123315	-	BC043365 TSC_hg19_v1_chr10_-_28821677	352978	-	AK292521|ARMC4|55130|armadillo repeat containing 4##AK001679|ARMC4|55130|armadillo repeat containing 4##NM_018076|ARMC4|55130|armadillo repeat containing 4##BC085611|ARMC4|55130|armadillo repeat containing 4##BC036207|MKX|283078|mohawk homeobox##AK125339|MKX|283078|mohawk homeobox##NM_001242702|MKX|283078|mohawk homeobox##NM_173576|MKX|283078|mohawk homeobox##AY574034|RAB18|22931|RAB18, member RAS oncogene family##AK295443|RAB18|22931|RAB18, member RAS oncogene family##AK297629|RAB18|22931|RAB18, member RAS oncogene family##AK299457|RAB18|22931|RAB18, member RAS oncogene family##BC029350|RAB18|22931|RAB18, member RAS oncogene family##AF087860|RAB18|22931|RAB18, member RAS oncogene family##BC015014|RAB18|22931|RAB18, member RAS oncogene family##NM_021252|RAB18|22931|RAB18, member RAS oncogene family##AL136734|RAB18|22931|RAB18, member RAS oncogene family##AK223153|RAB18|22931|RAB18, member RAS oncogene family##AF137372|RAB18|22931|RAB18, member RAS oncogene family##AF498950|RAB18|22931|RAB18, member RAS oncogene family##AK001555|RAB18|22931|RAB18, member RAS oncogene family##AM393142|RAB18|22931|RAB18, member RAS oncogene family##BT009840|RAB18|22931|RAB18, member RAS oncogene family##CR533455|RAB18|22931|RAB18, member RAS oncogene family##BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##BC043365|LOC220906|220906|uncharacterized LOC220906	0.964229	CTCF.p2:8:0.964
chr2	110369311	110369425	reg1020956.p1	5.936	+	NM_001099289 DQ307286	-623305	+	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	-763621	-	TSC_hg19_v1_chr2_-_109605623 AK296936	-763749	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	2113	-	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	2357	-	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	2577	+	NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##AK296936|EDAR|10913|ectodysplasin A receptor##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57	0.02435	
chr7	74508228	74508365	reg1024307.p1	5.936	+	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	-18604	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	-18658	-	AB463349 AF410455 AM392683 DQ893169 TSC_hg19_v1_chr7_-_74489627 AL136804 AK309117 BC007823 BC019008	-18694	-	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	78	+	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	359224	-	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	480274	+	BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AF410455|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AM392683|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##DQ893169|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AL136804|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK309117|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC007823|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC019008|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3	0.0	
chr8	121076054	121076218	reg1024414.p1	5.936	+	NM_022783 TSC_hg19_v1_chr8_+_120885965 AK315175 AK225168 AK297822 AL136678 AK225675 BC024746 AK022490 BC012040 AM392576 AM393333 AB527130 AK023916	-190132	+	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	-208022	-	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	-231059	-	TSC_hg19_v1_chr8_+_121137341 NM_021110 Y11709 AK293080 AK307716 AK311498	61219	+	CU692406 DQ893117 DQ893487 DQ896395 AK307322 TSC_hg19_v1_chr8_-_121457370 AB049640 AF112214 BC009190	381219	-	TSC_hg19_v1_chr8_-_121457391 AK311924	381257	-	NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_021110|COL14A1|7373|collagen, type XIV, alpha 1##Y11709|COL14A1|7373|collagen, type XIV, alpha 1##AK293080|COL14A1|7373|collagen, type XIV, alpha 1##AK307716|COL14A1|7373|collagen, type XIV, alpha 1##AK311498|COL14A1|7373|collagen, type XIV, alpha 1##DQ893117|MRPL13|28998|mitochondrial ribosomal protein L13##DQ893487|MRPL13|28998|mitochondrial ribosomal protein L13##DQ896395|MRPL13|28998|mitochondrial ribosomal protein L13##AK307322|MRPL13|28998|mitochondrial ribosomal protein L13##AB049640|MRPL13|28998|mitochondrial ribosomal protein L13##AF112214|MRPL13|28998|mitochondrial ribosomal protein L13##BC009190|MRPL13|28998|mitochondrial ribosomal protein L13##AK311924|MRPL13|28998|mitochondrial ribosomal protein L13	0.947199	CTCF.p2:8:0.947
chr12	105127618	105127745	reg1022918.p2	5.935	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-276594	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-276873	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-276910	+	TSC_hg19_v1_chr12_+_105153261 AF131762	25596	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	194582	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	252409	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.526582	CTCF.p2:-14:0.527
chr1	212208586	212208745	reg1007470.p2	5.935	+	D86960 NM_014873 TSC_hg19_v1_chr1_-_212004119	-204535	-	BC034621 TSC_hg19_v1_chr1_-_212003681	-204917	-	BT019729 CU688108 AB527570 AY045701 Z29066 AK223353 AK225522 AK303092 TSC_hg19_v1_chr1_-_211848968 U11050 BC043502 BC065932 BC052807 NM_001204182 NM_001204183 NM_002497	-359757	-	AM392654 CU676544 BC030716 TSC_hg19_v1_chr1_-_212208866 BC033918 AK001363 AK022509 BC009918 BC020523 AK297225 AK001598 NM_001199809 NM_001199811 NM_001199812 NM_015434	225	-	NM_016448 AK292343 TSC_hg19_v1_chr1_+_212209090 AK000742 AK303346	349	+	BC033540 TSC_hg19_v1_chr1_+_212209112 AF345896	453	+	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##BC034621|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##BT019729|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AY045701|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##Z29066|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK223353|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK225522|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK303092|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##U11050|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC043502|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC065932|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC052807|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204182|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204183|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_002497|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AM392654|INTS7|25896|integrator complex subunit 7##BC030716|INTS7|25896|integrator complex subunit 7##BC033918|INTS7|25896|integrator complex subunit 7##AK001363|INTS7|25896|integrator complex subunit 7##AK022509|INTS7|25896|integrator complex subunit 7##BC009918|INTS7|25896|integrator complex subunit 7##BC020523|INTS7|25896|integrator complex subunit 7##AK297225|INTS7|25896|integrator complex subunit 7##AK001598|INTS7|25896|integrator complex subunit 7##NM_001199809|INTS7|25896|integrator complex subunit 7##NM_001199811|INTS7|25896|integrator complex subunit 7##NM_001199812|INTS7|25896|integrator complex subunit 7##NM_015434|INTS7|25896|integrator complex subunit 7##NM_016448|DTL|51514|denticleless homolog (Drosophila)##AK292343|DTL|51514|denticleless homolog (Drosophila)##AK000742|DTL|51514|denticleless homolog (Drosophila)##AK303346|DTL|51514|denticleless homolog (Drosophila)##BC033540|DTL|51514|denticleless homolog (Drosophila)##AF345896|DTL|51514|denticleless homolog (Drosophila)	0.982157	CTCF.p2:-36:0.870
chr14	31031634	31031738	reg1018567.p1	5.935	+	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	-3326	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	-634832	-	TSC_hg19_v1_chr14_+_29241992 BX248251	-1789691	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	59838	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	59858	+	TSC_hg19_v1_chr14_+_31343764 NM_001135058 NM_004086 AY358900 AF006740 AK292724 BC000640 BC007230 BC018827	312032	+	NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1##NM_001135058|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_004086|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AY358900|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AF006740|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AK292724|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC000640|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC007230|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC018827|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)	0.830069	CTCF.p2:-7:0.830
chr14	96460622	96460791	reg1003277.p1	5.935	+	AK023027 TSC_hg19_v1_chr14_+_96342762	-117961	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-280239	-	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	-307928	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	44940	+	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	210371	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	210490	+	AK023027|LOC100507043|100507043|uncharacterized LOC100507043##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2	0.0	
chr15	67373593	67373718	reg1019111.p2	5.935	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	-15254	+	TSC_hg19_v1_chr15_+_67358179 AK290881	-15480	+	NM_001142861 U59914	-372726	+	NM_001145102 AK316017	44468	+	AK298139 NM_001145103	56703	+	NM_001145104 AK300614 AK301348	84841	+	NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##AK290881|SMAD3|4088|SMAD family member 3##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3##AK298139|SMAD3|4088|SMAD family member 3##NM_001145103|SMAD3|4088|SMAD family member 3##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3	0.010987	
chr15	91685497	91685614	reg1025323.p1	5.935	+	TSC_hg19_v1_chr15_+_91643558 AF052188	-41996	+	TSC_hg19_v1_chr15_+_91643505 NM_014848 BC030011	-42069	+	NM_001167580 TSC_hg19_v1_chr15_+_91643185 AK294902	-42346	+	AB018278 TSC_hg19_v1_chr15_+_91769341 CR457086 DQ891614 EU176590	83856	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	711388	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	711542	+	AF052188|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_014848|SV2B|9899|synaptic vesicle glycoprotein 2B##BC030011|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_001167580|SV2B|9899|synaptic vesicle glycoprotein 2B##AK294902|SV2B|9899|synaptic vesicle glycoprotein 2B##AB018278|SV2B|9899|synaptic vesicle glycoprotein 2B##CR457086|SV2B|9899|synaptic vesicle glycoprotein 2B##DQ891614|SV2B|9899|synaptic vesicle glycoprotein 2B##EU176590|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	0.0	
chr4	123653505	123653653	reg1024845.p1	5.935	+	CU688120 CU688122 DQ645417 BC069124 BC066258 BC066259 BC066260 BC066261 BC066262 NM_001207006 NM_021803 AF254069	-111391	-	AF532913 AY283686 AY523040 DQ231169 S77835 AB451325 AB451454 AB591003 CU688118 DQ861285 AF228636 BC066254 BC066255 BC066256 BC066257 BC070338 S77834 U25676 V00564 NM_000586 X01586	-275993	-	NM_001159285 NM_001159295 BC040229 AK093297 AX748040	-352947	+	AK123553 NM_001178007 NM_152618 BC055426 TSC_hg19_v1_chr4_+_123653916 BX538148	326	+	TSC_hg19_v1_chr4_+_123747833 J04513 NM_002006 BC111737 BC118573 BC118654	94265	+	TSC_hg19_v1_chr4_+_123747985 M27968	94387	+	DQ645417|IL21|59067|interleukin 21##BC069124|IL21|59067|interleukin 21##BC066258|IL21|59067|interleukin 21##BC066259|IL21|59067|interleukin 21##BC066260|IL21|59067|interleukin 21##BC066261|IL21|59067|interleukin 21##BC066262|IL21|59067|interleukin 21##NM_001207006|IL21|59067|interleukin 21##NM_021803|IL21|59067|interleukin 21##AF254069|IL21|59067|interleukin 21##AF532913|IL2|3558|interleukin 2##AY283686|IL2|3558|interleukin 2##AY523040|IL2|3558|interleukin 2##DQ231169|IL2|3558|interleukin 2##S77835|IL2|3558|interleukin 2##AB451325|IL2|3558|interleukin 2##AB451454|IL2|3558|interleukin 2##DQ861285|IL2|3558|interleukin 2##AF228636|IL2|3558|interleukin 2##BC066254|IL2|3558|interleukin 2##BC066255|IL2|3558|interleukin 2##BC066256|IL2|3558|interleukin 2##BC066257|IL2|3558|interleukin 2##BC070338|IL2|3558|interleukin 2##S77834|IL2|3558|interleukin 2##U25676|IL2|3558|interleukin 2##V00564|IL2|3558|interleukin 2##NM_000586|IL2|3558|interleukin 2##X01586|IL2|3558|interleukin 2##NM_001159285|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##NM_001159295|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##BC040229|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK093297|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK123553|BBS12|166379|Bardet-Biedl syndrome 12##NM_001178007|BBS12|166379|Bardet-Biedl syndrome 12##NM_152618|BBS12|166379|Bardet-Biedl syndrome 12##BC055426|BBS12|166379|Bardet-Biedl syndrome 12##BX538148|BBS12|166379|Bardet-Biedl syndrome 12##J04513|FGF2|2247|fibroblast growth factor 2 (basic)##NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)##BC111737|FGF2|2247|fibroblast growth factor 2 (basic)##M27968|FGF2|2247|fibroblast growth factor 2 (basic)	0.0	
chr8	123091269	123091397	reg1024884.p1	5.935	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-437707	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1266827	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1267063	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	702578	+	BC042145 TSC_hg19_v1_chr8_+_123794000	702661	+	TSC_hg19_v1_chr8_+_123794108 AB020661	702770	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.240273	CTCF.p2:1:0.240
chr9	95468888	95469005	reg1022193.p2	5.935	+	TSC_hg19_v1_chr9_-_95432542 BC026154 NM_022755	-36389	-	AF520811 TSC_hg19_v1_chr9_-_95432355 AK023225 AF351202	-36633	-	AB011792 AK303922 AK312820 AK296458 BX537976 NM_001197295 NM_001197296 NM_001393	-170634	-	AB014599 TSC_hg19_v1_chr9_-_95527124 AY052562 NM_001003800 NM_015250 BC073970	58137	-	AK299274 TSC_hg19_v1_chr9_-_95640325 AK091203 AX746846 NM_001007101 AL833202 NM_031486 AK292997 AK309617	171331	-	NM_001083536	240654	+	BC026154|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##NM_022755|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF520811|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AK023225|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF351202|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AB014599|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AY052562|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_001003800|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_015250|BICD2|23299|bicaudal D homolog 2 (Drosophila)##BC073970|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AK299274|ZNF484|83744|zinc finger protein 484##AK091203|ZNF484|83744|zinc finger protein 484##NM_001007101|ZNF484|83744|zinc finger protein 484##AL833202|ZNF484|83744|zinc finger protein 484##NM_031486|ZNF484|83744|zinc finger protein 484##AK292997|ZNF484|83744|zinc finger protein 484##AK309617|ZNF484|83744|zinc finger protein 484##NM_001083536|FGD3|89846|FYVE, RhoGEF and PH domain containing 3	0.991997	CTCF.p2:3:0.992
chr12	11915124	11915299	reg1025023.p1	5.934	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-112225	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-112437	+	TSC_hg19_v1_chr12_+_11802659 AK289441	-112538	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	308672	+	AF281254 AF281255 NM_030766 NM_138722	309190	+	AK074543 TSC_hg19_v1_chr12_-_12291395	376173	-	U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AK289441|ETV6|2120|ets variant 6##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6	0.0	
chr17	56076953	56077095	reg1022119.p1	5.934	+	TSC_hg19_v1_chr17_-_56065610 NM_007146	-11406	-	AB464342 D28118 TSC_hg19_v1_chr17_-_56065593	-11490	-	TSC_hg19_v1_chr17_+_56065413 AB593183	-11550	+	CU679661 AB384975 TSC_hg19_v1_chr17_-_56084508	7479	-	TSC_hg19_v1_chr17_-_56084515 BC010264	7514	-	TSC_hg19_v1_chr17_-_56084589 AK225711 AB062124	7556	-	NM_007146|VEZF1|7716|vascular endothelial zinc finger 1##D28118|VEZF1|7716|vascular endothelial zinc finger 1##BC010264|SRSF1|6426|serine/arginine-rich splicing factor 1##AK225711|SRSF1|6426|serine/arginine-rich splicing factor 1##AB062124|SRSF1|6426|serine/arginine-rich splicing factor 1	0.996916	CTCF.p2:21:0.997
chr5	114369702	114369797	reg1021927.p2	5.934	+	BC015371 NM_170775 BC040722	-600500	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	-671288	+	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	-671700	+	TSC_hg19_v1_chr5_-_114505606 AK316422 AK296389	135855	-	AB196558 AJ272269 BC130334 AK125426 BC045164 BC046096 NM_001017397 NM_001017398 NM_018700	146238	-	AY780790 AB590094 TSC_hg19_v1_chr5_-_114598563 NM_005023	228817	-	BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK316422|TRIM36|55521|tripartite motif containing 36##AK296389|TRIM36|55521|tripartite motif containing 36##AB196558|TRIM36|55521|tripartite motif containing 36##AJ272269|TRIM36|55521|tripartite motif containing 36##BC130334|TRIM36|55521|tripartite motif containing 36##AK125426|TRIM36|55521|tripartite motif containing 36##BC045164|TRIM36|55521|tripartite motif containing 36##BC046096|TRIM36|55521|tripartite motif containing 36##NM_001017397|TRIM36|55521|tripartite motif containing 36##NM_001017398|TRIM36|55521|tripartite motif containing 36##NM_018700|TRIM36|55521|tripartite motif containing 36##AY780790|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##NM_005023|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit	0.089547	
chr8	37037476	37037578	reg1023704.p1	5.934	+	NM_001031836 AK302391 BC028701	-395657	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-1944540	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-3580032	-	TSC_hg19_v1_chr8_-_37457377 AK025743	419841	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	515790	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	556579	+	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2	0.049802	
chr8	62975404	62975544	reg1028578.p1	5.934	+	TSC_hg19_v1_chr8_-_62627167 NM_001164754 NM_001164755 NM_001164756 NM_004318 NM_032466	-348285	-	TSC_hg19_v1_chr8_-_62627152 BC015518 BC025236 AK298577	-348336	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	-348456	-	TSC_hg19_v1_chr8_+_63161185 AK299689	185732	+	TSC_hg19_v1_chr8_+_63161499 AK096949 NM_173688 AX721226 AB463913	186090	+	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	975924	-	NM_001164754|ASPH|444|aspartate beta-hydroxylase##NM_001164755|ASPH|444|aspartate beta-hydroxylase##NM_001164756|ASPH|444|aspartate beta-hydroxylase##NM_004318|ASPH|444|aspartate beta-hydroxylase##NM_032466|ASPH|444|aspartate beta-hydroxylase##BC015518|ASPH|444|aspartate beta-hydroxylase##BC025236|ASPH|444|aspartate beta-hydroxylase##AK298577|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase##AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)	0.022582	
chr2	220601062	220601172	reg1022532.p1	5.933	+	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-108763	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-138528	+	M13981 NM_002191 BC039076 BC006391 TSC_hg19_v1_chr2_+_220437031 BT006954 CU675381 DQ890602 DQ893773 M13144	-164071	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	1835893	-	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	2557903	-	AK057009 NM_153038 BC109388	2561795	+	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##M13981|INHA|3623|inhibin, alpha##NM_002191|INHA|3623|inhibin, alpha##BC039076|INHA|3623|inhibin, alpha##BC006391|INHA|3623|inhibin, alpha##BT006954|INHA|3623|inhibin, alpha##DQ890602|INHA|3623|inhibin, alpha##DQ893773|INHA|3623|inhibin, alpha##M13144|INHA|3623|inhibin, alpha##BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140	0.924917	CTCF.p2:-3:0.925
chr6_apd_hap1	288452	288580	reg1025985.p2	5.933	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999391	CTCF.p2:1:0.999
chr9	45601592	45601720	reg1027689.p1	5.933	+	TSC_hg19_v1_chr9_+_45441926 BC006438	-159730	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-1916813	+	NM_001145196	-1970927	-	BC040528 NM_001113541 NM_015667	19907953	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	20855645	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	20856840	-	BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.990956	CTCF.p2:1:0.980
chr11	32395887	32396035	reg1023321.p2	5.932	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	-283262	+	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	-283484	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-556483	-	AK093168 BC032861 NM_001198551 NM_001198552	56399	-	TSC_hg19_v1_chr11_-_32456950 BC046461	60978	-	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	61108	-	BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1##BC046461|WT1|7490|Wilms tumor 1##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1	0.990071	CTCF.p2:-11:0.990
chr13	99083509	99083594	reg1023211.p1	5.932	+	TSC_hg19_v1_chr13_+_99058147 AF339817	-25345	+	AB464689 EU446571 AF539427 BC025388 BC017585 NM_178861	-254046	-	TSC_hg19_v1_chr13_+_98795717 AB008430 BC065020	-287833	+	AF083420 NM_003576	90744	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	145503	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	145571	-	EU446571|RNF113B|140432|ring finger protein 113B##AF539427|RNF113B|140432|ring finger protein 113B##BC025388|RNF113B|140432|ring finger protein 113B##BC017585|RNF113B|140432|ring finger protein 113B##NM_178861|RNF113B|140432|ring finger protein 113B##AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##AF083420|STK24|8428|serine/threonine kinase 24##NM_003576|STK24|8428|serine/threonine kinase 24##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24	0.922614	CTCF.p2:8:0.923
chr20	45173316	45173415	reg1021993.p1	5.932	+	AK001331 AK095611 BC024177 NM_018102 NM_199441 BC026321 TSC_hg19_v1_chr20_-_45142199	-31170	-	AL831934 TSC_hg19_v1_chr20_-_45087948	-85434	-	TSC_hg19_v1_chr20_-_45061554 AK293861	-111737	-	NM_080721 TSC_hg19_v1_chr20_-_45179294	5888	-	DQ892655 DQ895894 AF154121 AY072810 AK293902 AK056713 AK295748 AK315131 BC035966 NM_001193339 NM_001193342 NM_022829 TSC_hg19_v1_chr20_-_45280099	106716	-	TSC_hg19_v1_chr20_-_45313125 AK096658 NM_001011554 NM_001193340	139759	-	AK001331|ZNF334|55713|zinc finger protein 334##AK095611|ZNF334|55713|zinc finger protein 334##BC024177|ZNF334|55713|zinc finger protein 334##NM_018102|ZNF334|55713|zinc finger protein 334##NM_199441|ZNF334|55713|zinc finger protein 334##BC026321|ZNF334|55713|zinc finger protein 334##AL831934|ZNF663|100130934|zinc finger protein 663##AK293861|ELMO2|63916|engulfment and cell motility 2##NM_080721|C20orf123|128506|chromosome 20 open reading frame 123##DQ892655|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##DQ895894|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AF154121|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AY072810|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK293902|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK056713|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK295748|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK315131|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##BC035966|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193339|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193342|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_022829|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK096658|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001011554|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193340|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3	0.0	
chr4	184171151	184171261	reg1024632.p1	5.932	+	TSC_hg19_v1_chr4_+_184020431 NM_024949	-150728	+	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	-332572	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	-332676	-	NM_001111319	70720	-	NM_001185149	72372	-	TSC_hg19_v1_chr4_+_184365788 AK000043 NM_017632	194580	+	NM_024949|WWC2|80014|WW and C2 domain containing 2##NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001111319|CLDN22|53842|claudin 22##NM_001185149|CLDN24|100132463|claudin 24##AK000043|CDKN2AIP|55602|CDKN2A interacting protein##NM_017632|CDKN2AIP|55602|CDKN2A interacting protein	0.979711	CTCF.p2:20:0.980
chr4	56275746	56275855	reg1022857.p1	5.932	+	TSC_hg19_v1_chr4_+_56262123 BC107582 AK290663 AK295289 BC104978 BC104980 AF132746 AF183409	-13562	+	TSC_hg19_v1_chr4_+_56262094 NM_018475	-13725	+	TSC_hg19_v1_chr4_+_56261819 AK123358	-14005	+	TSC_hg19_v1_chr4_-_56412988 BC126157 BC126159 AF011568 NM_004898 AK291708 AK223549	137191	-	BC034431 NM_152401	182578	-	DQ891295 DQ894479 BC012908 NM_006681 X76029 TSC_hg19_v1_chr4_-_56502465	226612	-	BC107582|TMEM165|55858|transmembrane protein 165##AK290663|TMEM165|55858|transmembrane protein 165##AK295289|TMEM165|55858|transmembrane protein 165##BC104978|TMEM165|55858|transmembrane protein 165##BC104980|TMEM165|55858|transmembrane protein 165##AF132746|TMEM165|55858|transmembrane protein 165##AF183409|TMEM165|55858|transmembrane protein 165##NM_018475|TMEM165|55858|transmembrane protein 165##BC126157|CLOCK|9575|clock homolog (mouse)##BC126159|CLOCK|9575|clock homolog (mouse)##AF011568|CLOCK|9575|clock homolog (mouse)##NM_004898|CLOCK|9575|clock homolog (mouse)##AK291708|CLOCK|9575|clock homolog (mouse)##AK223549|CLOCK|9575|clock homolog (mouse)##BC034431|PDCL2|132954|phosducin-like 2##NM_152401|PDCL2|132954|phosducin-like 2##DQ891295|NMU|10874|neuromedin U##DQ894479|NMU|10874|neuromedin U##BC012908|NMU|10874|neuromedin U##NM_006681|NMU|10874|neuromedin U##X76029|NMU|10874|neuromedin U	0.740426	CTCF.p2:-15:0.740
chr5	43043335	43043444	reg1020829.p1	5.932	+	AB463523 BC067873 AY032883 NM_001014279	-3093	-	TSC_hg19_v1_chr5_-_42993436 AK056817	-49943	-	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	-231398	-	AK307963 TSC_hg19_v1_chr5_+_43121018 BC045109	77612	+	TSC_hg19_v1_chr5_+_43121609 AK299315 AK307977	78225	+	AK057343 NM_003432 TSC_hg19_v1_chr5_+_43121669 AK310735 BC017923	78295	+	BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39##AK056817|FLJ32255|643977|uncharacterized LOC643977##Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK307963|ZNF131|7690|zinc finger protein 131##AK299315|ZNF131|7690|zinc finger protein 131##AK307977|ZNF131|7690|zinc finger protein 131##AK057343|ZNF131|7690|zinc finger protein 131##NM_003432|ZNF131|7690|zinc finger protein 131##AK310735|ZNF131|7690|zinc finger protein 131##BC017923|ZNF131|7690|zinc finger protein 131	0.033784	
chr14	31795456	31795561	reg1024765.p2	5.931	+	TSC_hg19_v1_chr14_-_31676920 BC016947	-118573	-	TSC_hg19_v1_chr14_-_31676690 NM_015382	-118823	-	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	-299938	-	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	94253	-	TSC_hg19_v1_chr14_-_31926633 BC010618 AK302829 AK055367 NM_080664	131167	-	GQ981321 GQ981322 NM_001197184	161642	-	NM_015382|HECTD1|25831|HECT domain containing 1##BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3##BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A##BC010618|C14orf126|112487|chromosome 14 open reading frame 126##AK055367|C14orf126|112487|chromosome 14 open reading frame 126##NM_080664|C14orf126|112487|chromosome 14 open reading frame 126##GQ981321|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##GQ981322|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##NM_001197184|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)	0.02063	
chrX	150528840	150528975	reg1027245.p1	5.931	+	NM_004224 U52219 BC103696 BC105683 BC105684 EU432118 AY114101 AY114102	-183708	+	TSC_hg19_v1_chrX_+_150151807 BX537505 NM_005342 Y10043 BC070482	-377100	+	TSC_hg19_v1_chrX_-_150067149 BC030536 AY358837 AL136580 NM_001184808 NM_001242614 NM_031462 NM_134445 NM_134446	-461700	-	TSC_hg19_v1_chrX_+_150565667 NM_001017980	36755	+	TSC_hg19_v1_chrX_+_150565686 AK096835	36773	+	TSC_hg19_v1_chrX_+_150565705 BC103701 BC103702 BC105693 BC105694 AL833596 BC110800 AM392666 AB528749	36828	+	NM_004224|GPR50|9248|G protein-coupled receptor 50##U52219|GPR50|9248|G protein-coupled receptor 50##BC103696|GPR50|9248|G protein-coupled receptor 50##BC105683|GPR50|9248|G protein-coupled receptor 50##BC105684|GPR50|9248|G protein-coupled receptor 50##EU432118|GPR50|9248|G protein-coupled receptor 50##AY114101|GPR50|9248|G protein-coupled receptor 50##AY114102|GPR50|9248|G protein-coupled receptor 50##BX537505|HMGB3|3149|high mobility group box 3##NM_005342|HMGB3|3149|high mobility group box 3##Y10043|HMGB3|3149|high mobility group box 3##BC070482|HMGB3|3149|high mobility group box 3##BC030536|CD99L2|83692|CD99 molecule-like 2##AY358837|CD99L2|83692|CD99 molecule-like 2##AL136580|CD99L2|83692|CD99 molecule-like 2##NM_001184808|CD99L2|83692|CD99 molecule-like 2##NM_001242614|CD99L2|83692|CD99 molecule-like 2##NM_031462|CD99L2|83692|CD99 molecule-like 2##NM_134445|CD99L2|83692|CD99 molecule-like 2##NM_134446|CD99L2|83692|CD99 molecule-like 2##NM_001017980|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AK096835|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC103701|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC103702|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC105693|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC105694|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AL833596|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##BC110800|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)##AM392666|VMA21|203547|VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)	1.212165	CTCF.p2:6:0.979	CTCF.p2:-23:0.233
chr7	105401636	105401755	reg1001928.p4	5.930	+	AK300338 NM_138495	-82087	-	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	-179760	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	-229049	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	115290	-	TSC_hg19_v1_chr7_+_105517250 AK125261	115569	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	202003	+	AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1##BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##AK125261|CDHR3|222256|cadherin-related family member 3##NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3	0.012606	
chr21	27543098	27543210	reg1022093.p2	5.929	+	TSC_hg19_v1_chr21_-_27543138 NM_000484 NM_001136129 NM_001136130 NM_001204301 NM_001204302 NM_001204303 NM_201413 NM_201414	-18	-	TSC_hg19_v1_chr21_-_27543085 BC004369 AF282245 BC065523 BC065529 AK294534 AK297412 AK298861 Y00264	-82	-	TSC_hg19_v1_chr21_-_27543053 X06989	-104	-	AK296229 NM_001136131	291	-	AY061853 AF401639 AK223576 AK313231 BC036761 AL833200 NM_052954 AK054581 AK304124	402280	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	674317	-	NM_000484|APP|351|amyloid beta (A4) precursor protein##NM_001136129|APP|351|amyloid beta (A4) precursor protein##NM_001136130|APP|351|amyloid beta (A4) precursor protein##NM_001204301|APP|351|amyloid beta (A4) precursor protein##NM_001204302|APP|351|amyloid beta (A4) precursor protein##NM_001204303|APP|351|amyloid beta (A4) precursor protein##NM_201413|APP|351|amyloid beta (A4) precursor protein##NM_201414|APP|351|amyloid beta (A4) precursor protein##BC004369|APP|351|amyloid beta (A4) precursor protein##AF282245|APP|351|amyloid beta (A4) precursor protein##BC065523|APP|351|amyloid beta (A4) precursor protein##BC065529|APP|351|amyloid beta (A4) precursor protein##AK294534|APP|351|amyloid beta (A4) precursor protein##AK297412|APP|351|amyloid beta (A4) precursor protein##AK298861|APP|351|amyloid beta (A4) precursor protein##Y00264|APP|351|amyloid beta (A4) precursor protein##X06989|APP|351|amyloid beta (A4) precursor protein##AK296229|APP|351|amyloid beta (A4) precursor protein##NM_001136131|APP|351|amyloid beta (A4) precursor protein##AY061853|CYYR1|116159|cysteine/tyrosine-rich 1##AF401639|CYYR1|116159|cysteine/tyrosine-rich 1##AK223576|CYYR1|116159|cysteine/tyrosine-rich 1##AK313231|CYYR1|116159|cysteine/tyrosine-rich 1##BC036761|CYYR1|116159|cysteine/tyrosine-rich 1##AL833200|CYYR1|116159|cysteine/tyrosine-rich 1##NM_052954|CYYR1|116159|cysteine/tyrosine-rich 1##AK054581|CYYR1|116159|cysteine/tyrosine-rich 1##AK304124|CYYR1|116159|cysteine/tyrosine-rich 1##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1	0.015194	
chr21	32871433	32871529	reg1023904.p1	5.929	+	AB096964 NM_001099219	-460687	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	-617623	-	AJ457063 AB096962 NM_181606	-669493	-	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	59877	-	TSC_hg19_v1_chr21_+_33032005 NM_000454 AK312116 BC001034 X02317 EF151142 AB464254 AY049787 AY450286 BT006676 CR450355 CR541742 CU674512 EF143990	160526	+	AB032998 AK025748 AL117417 TSC_hg19_v1_chr21_-_33074136	202637	-	AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##NM_000454|SOD1|6647|superoxide dismutase 1, soluble##AK312116|SOD1|6647|superoxide dismutase 1, soluble##BC001034|SOD1|6647|superoxide dismutase 1, soluble##X02317|SOD1|6647|superoxide dismutase 1, soluble##EF151142|SOD1|6647|superoxide dismutase 1, soluble##AY049787|SOD1|6647|superoxide dismutase 1, soluble##AY450286|SOD1|6647|superoxide dismutase 1, soluble##BT006676|SOD1|6647|superoxide dismutase 1, soluble##CR450355|SOD1|6647|superoxide dismutase 1, soluble##CR541742|SOD1|6647|superoxide dismutase 1, soluble##EF143990|SOD1|6647|superoxide dismutase 1, soluble##AB032998|SCAF4|57466|SR-related CTD-associated factor 4##AK025748|SCAF4|57466|SR-related CTD-associated factor 4##AL117417|SCAF4|57466|SR-related CTD-associated factor 4	0.070469	
chr10	105302616	105302713	reg1021224.p1	5.928	+	NM_004210 U87864	-48930	+	BC043367 NM_001129742	-63668	-	BC036193 BC036208 NM_001001412	-84019	-	AK299620 TSC_hg19_v1_chr10_+_105344798	42103	+	AB385330 TSC_hg19_v1_chr10_-_105420936	118244	-	TSC_hg19_v1_chr10_-_105421464 AK294454	118785	-	NM_004210|NEURL|9148|neuralized homolog (Drosophila)##U87864|NEURL|9148|neuralized homolog (Drosophila)##BC043367|CALHM3|119395|calcium homeostasis modulator 3##NM_001129742|CALHM3|119395|calcium homeostasis modulator 3##BC036193|CALHM1|255022|calcium homeostasis modulator 1##BC036208|CALHM1|255022|calcium homeostasis modulator 1##NM_001001412|CALHM1|255022|calcium homeostasis modulator 1##AK299620|NEURL|9148|neuralized homolog (Drosophila)##AK294454|SH3PXD2A|9644|SH3 and PX domains 2A	0.488707	CTCF.p2:-8:0.489
chr12	53938790	53938919	reg1023249.p2	5.928	+	BC104234 BC104235 AF005271 NM_003717	-37458	-	NM_134324	-43478	+	TSC_hg19_v1_chr12_+_53895135 AK309569 U08998 AK290737 AK293728 AB464283 BT007140 DQ893549 DQ893931	-43726	+	AB463398 X57197 NM_001130059	55939	-	TSC_hg19_v1_chr12_-_54019764 BC042363 NM_001206683	80881	-	TSC_hg19_v1_chr12_-_54020167 BC136302 X52943 AK298853 AK313507 BC032433 BC140006 NM_001130060 NM_001206682 NM_006856	81299	-	BC104234|NPFF|8620|neuropeptide FF-amide peptide precursor##BC104235|NPFF|8620|neuropeptide FF-amide peptide precursor##AF005271|NPFF|8620|neuropeptide FF-amide peptide precursor##NM_003717|NPFF|8620|neuropeptide FF-amide peptide precursor##NM_134324|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##AK309569|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##U08998|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##AK290737|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##BT007140|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##DQ893549|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##DQ893931|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##X57197|ATF7|11016|activating transcription factor 7##NM_001130059|ATF7|11016|activating transcription factor 7##BC042363|ATF7|11016|activating transcription factor 7##NM_001206683|ATF7|11016|activating transcription factor 7##BC136302|ATF7|11016|activating transcription factor 7##X52943|ATF7|11016|activating transcription factor 7##AK298853|ATF7|11016|activating transcription factor 7##AK313507|ATF7|11016|activating transcription factor 7##BC032433|ATF7|11016|activating transcription factor 7##BC140006|ATF7|11016|activating transcription factor 7##NM_001130060|ATF7|11016|activating transcription factor 7##NM_001206682|ATF7|11016|activating transcription factor 7##NM_006856|ATF7|11016|activating transcription factor 7	0.272238	
chr12	63545988	63546105	reg1023364.p1	5.928	+	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	-1375	-	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	-217121	-	TSC_hg19_v1_chr12_-_63328666 NM_020700 BC157843	-217341	-	NM_000706	543	-	BC125215 BC125216 TSC_hg19_v1_chr12_-_64062283 AY358792 AL833344 AK310102 AK057511 BC068442 NM_173812	516250	-	TSC_hg19_v1_chr12_+_64173629 AB015633 NM_014254 BC013152 BC002596 AK289382 CU680528 DQ891077 DQ894259	627621	+	AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A##BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##NM_020700|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC157843|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##NM_000706|AVPR1A|552|arginine vasopressin receptor 1A##BC125215|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC125216|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AY358792|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AL833344|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK310102|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK057511|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC068442|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_173812|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AB015633|TMEM5|10329|transmembrane protein 5##NM_014254|TMEM5|10329|transmembrane protein 5##BC013152|TMEM5|10329|transmembrane protein 5##BC002596|TMEM5|10329|transmembrane protein 5##AK289382|TMEM5|10329|transmembrane protein 5##DQ891077|TMEM5|10329|transmembrane protein 5##DQ894259|TMEM5|10329|transmembrane protein 5	0.0	
chr15	73992532	73992712	reg1001338.p1	5.928	+	TSC_hg19_v1_chr15_+_73976784 AK296358 AK291721 AK309728	-15837	+	TSC_hg19_v1_chr15_+_73976732 AK298522 AK292711 AK074849	-15880	+	TSC_hg19_v1_chr15_+_73976696 AY358343	-15925	+	BC111368 NM_001039614	51193	-	BC033516 NM_153356 AB449907	173386	+	TSC_hg19_v1_chr15_+_74218789 NM_005576	226167	+	AK296358|CD276|80381|CD276 molecule##AK291721|CD276|80381|CD276 molecule##AK309728|CD276|80381|CD276 molecule##AK298522|CD276|80381|CD276 molecule##AK292711|CD276|80381|CD276 molecule##AK074849|CD276|80381|CD276 molecule##AY358343|CD276|80381|CD276 molecule##BC111368|C15orf59|388135|chromosome 15 open reading frame 59##NM_001039614|C15orf59|388135|chromosome 15 open reading frame 59##BC033516|TBC1D21|161514|TBC1 domain family, member 21##NM_153356|TBC1D21|161514|TBC1 domain family, member 21##AB449907|TBC1D21|161514|TBC1 domain family, member 21##NM_005576|LOXL1|4016|lysyl oxidase-like 1	0.026647	
chr16	57643609	57643737	reg1023395.p1	5.928	+	TSC_hg19_v1_chr16_+_57576577 BC032401 NM_153837	-67085	+	TSC_hg19_v1_chr16_+_57576554 AK303661 AK292783 AK160368 AY358447 AK301357	-67119	+	BC008285 BC009941 NM_033212	-73208	-	AK131550 TSC_hg19_v1_chr16_+_57653651 CR936747	9982	+	NM_001145770 NM_005682 AK075270 AY358400	10275	+	AK312405 NM_001145771 NM_001145772 NM_001145773 NM_201524 NM_201525 TSC_hg19_v1_chr16_+_57662543 AK075555 AK299110	18781	+	BC032401|GPR114|221188|G protein-coupled receptor 114##NM_153837|GPR114|221188|G protein-coupled receptor 114##AK303661|GPR114|221188|G protein-coupled receptor 114##AK292783|GPR114|221188|G protein-coupled receptor 114##AK160368|GPR114|221188|G protein-coupled receptor 114##AY358447|GPR114|221188|G protein-coupled receptor 114##AK301357|GPR114|221188|G protein-coupled receptor 114##BC008285|CCDC102A|92922|coiled-coil domain containing 102A##BC009941|CCDC102A|92922|coiled-coil domain containing 102A##NM_033212|CCDC102A|92922|coiled-coil domain containing 102A##AK131550|GPR56|9289|G protein-coupled receptor 56##CR936747|GPR56|9289|G protein-coupled receptor 56##NM_001145770|GPR56|9289|G protein-coupled receptor 56##NM_005682|GPR56|9289|G protein-coupled receptor 56##AK075270|GPR56|9289|G protein-coupled receptor 56##AY358400|GPR56|9289|G protein-coupled receptor 56##AK312405|GPR56|9289|G protein-coupled receptor 56##NM_001145771|GPR56|9289|G protein-coupled receptor 56##NM_001145772|GPR56|9289|G protein-coupled receptor 56##NM_001145773|GPR56|9289|G protein-coupled receptor 56##NM_201524|GPR56|9289|G protein-coupled receptor 56##NM_201525|GPR56|9289|G protein-coupled receptor 56##AK075555|GPR56|9289|G protein-coupled receptor 56##AK299110|GPR56|9289|G protein-coupled receptor 56	0.034039	
chr17	29852911	29853033	reg1000109.p2	5.928	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-37911	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-134108	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-134305	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	333299	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	375694	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	375759	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.432476	CTCF.p2:16:0.432
chr17	67603430	67603548	reg1022372.p1	5.928	+	TSC_hg19_v1_chr17_+_67498396 U39064	-105009	+	AK290747 NM_002758 U39065 AK225719 X96757 BC012009	-192613	+	TSC_hg19_v1_chr17_-_67323275 BC029426 AJ512612 AJ275973 AK292592 NM_172232	-280200	-	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	467941	+	BC033038 NM_170742	497505	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	562207	+	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6##NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6##U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6##X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC029426|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ512612|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ275973|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AK292592|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_172232|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2	0.0	
chr4	96016656	96016747	reg1022204.p1	5.928	+	TSC_hg19_v1_chr4_+_95679109 NM_001203 U89326	-337595	+	BC026029 AM393306 AM393394 AM393485 AM393621 AM393813 DQ890686 DQ893868 AB587372 CU676108 CU679071 AY598328 BT007328 TSC_hg19_v1_chr4_+_95376500	-640251	+	TSC_hg19_v1_chr4_+_95373092 BC017902 BC008741 AK291898 AK291624 AK304125 AK296980 AL832157 AL832686 AF061258 AL833151 AL833438	-643605	+	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	453478	-	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	453675	-	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	744557	+	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB##U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB##BC026029|PDLIM5|10611|PDZ and LIM domain 5##AM393306|PDLIM5|10611|PDZ and LIM domain 5##AM393394|PDLIM5|10611|PDZ and LIM domain 5##AM393485|PDLIM5|10611|PDZ and LIM domain 5##AM393621|PDLIM5|10611|PDZ and LIM domain 5##AM393813|PDLIM5|10611|PDZ and LIM domain 5##DQ890686|PDLIM5|10611|PDZ and LIM domain 5##DQ893868|PDLIM5|10611|PDZ and LIM domain 5##AY598328|PDLIM5|10611|PDZ and LIM domain 5##BT007328|PDLIM5|10611|PDZ and LIM domain 5##BC017902|PDLIM5|10611|PDZ and LIM domain 5##BC008741|PDLIM5|10611|PDZ and LIM domain 5##AK291898|PDLIM5|10611|PDZ and LIM domain 5##AK291624|PDLIM5|10611|PDZ and LIM domain 5##AK304125|PDLIM5|10611|PDZ and LIM domain 5##AK296980|PDLIM5|10611|PDZ and LIM domain 5##AL832157|PDLIM5|10611|PDZ and LIM domain 5##AL832686|PDLIM5|10611|PDZ and LIM domain 5##AF061258|PDLIM5|10611|PDZ and LIM domain 5##AL833151|PDLIM5|10611|PDZ and LIM domain 5##AL833438|PDLIM5|10611|PDZ and LIM domain 5##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2	0.941508	CTCF.p2:3:0.942
chr7	52086277	52086384	reg1022142.p2	5.928	+	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	-701844	-	AB385366 TSC_hg19_v1_chr7_-_51384416 BC136441 BC144099	-701950	-	TSC_hg19_v1_chr7_-_50861150 NM_001001555	-1225176	-	NM_182595	1017018	+	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	2523752	+	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	2740549	-	BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##BC136441|COBL|23242|cordon-bleu homolog (mouse)##BC144099|COBL|23242|cordon-bleu homolog (mouse)##NM_001001555|GRB10|2887|growth factor receptor-bound protein 10##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12##NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit	0.998646	CTCF.p2:0:0.999
chr1	32469273	32469392	reg1024176.p1	5.927	+	TSC_hg19_v1_chr1_-_32403992 NM_080391	-65335	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	-65401	-	NM_001195100 NM_001195101	-84074	-	TSC_hg19_v1_chr1_+_32479463 AK293369 AK091346 AX746925 AK312916 AK303218 BC000717 BC019109 M88108 NM_006559 BC010132 AB590354 DQ895323 U78971	10166	+	TSC_hg19_v1_chr1_+_32538502 AK023331 NM_018056	69172	+	AL136695 TSC_hg19_v1_chr1_+_32538539 AK001177 BC004364 AK296653 AK298766 AK300293	69242	+	NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK023331|TMEM39B|55116|transmembrane protein 39B##NM_018056|TMEM39B|55116|transmembrane protein 39B##AL136695|TMEM39B|55116|transmembrane protein 39B##AK001177|TMEM39B|55116|transmembrane protein 39B##BC004364|TMEM39B|55116|transmembrane protein 39B##AK296653|TMEM39B|55116|transmembrane protein 39B##AK298766|TMEM39B|55116|transmembrane protein 39B##AK300293|TMEM39B|55116|transmembrane protein 39B	0.680683	CTCF.p2:35:0.681
chr16	68001470	68001568	reg1024825.p2	5.927	+	AK299042 NM_001145964	-781	-	AK316415 AK097808 AK302790 NM_001145963	-3562	-	AK310027 TSC_hg19_v1_chr16_-_67978467	-23075	-	AF047338 AF054505 AF054506 DQ892254 DQ895457 TSC_hg19_v1_chr16_-_68002543 AK293956 U55054 AK293906 BC021193 BC035480 NM_001145961 NM_001145962 NM_005072	1010	-	AB590471 BC037243 AJ291679 AY358390 BC057789 AK057401 NM_001129758 NM_022357	12887	-	AJ295149 NM_022355	31840	-	AK299042|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_001145964|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK316415|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK097808|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK302790|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_001145963|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK310027|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AF047338|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AF054505|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AF054506|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##DQ892254|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##DQ895457|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK293956|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##U55054|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK293906|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##BC021193|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##BC035480|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_001145961|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_001145962|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_005072|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##BC037243|DPEP3|64180|dipeptidase 3##AJ291679|DPEP3|64180|dipeptidase 3##AY358390|DPEP3|64180|dipeptidase 3##BC057789|DPEP3|64180|dipeptidase 3##AK057401|DPEP3|64180|dipeptidase 3##NM_001129758|DPEP3|64180|dipeptidase 3##NM_022357|DPEP3|64180|dipeptidase 3##AJ295149|DPEP2|64174|dipeptidase 2##NM_022355|DPEP2|64174|dipeptidase 2	0.0	
chr13	52419383	52419498	reg1024673.p1	5.926	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	-41165	-	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-260705	+	TSC_hg19_v1_chr13_+_52158639 BC014004	-260799	+	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	16754	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	166110	-	TSC_hg19_v1_chr13_+_52586546 NM_001004127 BC142998 AK296747 AK092428 AX747540 BC108677 BC111022 AK025456 BC143059 BC150316	167095	+	BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##BC014004|WDFY2|115825|WD repeat and FYVE domain containing 2##AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)	0.247523	CTCF.p2:-21:0.248
chr20	35830918	35831011	reg1022972.p2	5.926	+	AB527120 AM392522 AM392819 TSC_hg19_v1_chr20_-_35807952 BC030006 BC057767 NM_152503 NM_213631 NM_213632 AK093432 AX748122	-23027	-	TSC_hg19_v1_chr20_+_35807749 AK308683 CR456899 DQ892347 DQ895552	-23211	+	TSC_hg19_v1_chr20_+_35807732 AK315801 BC003560	-23249	+	X00094 BC098109 BC098161 BC099727 NM_001184731 NM_021081	54323	-	TSC_hg19_v1_chr20_+_35918057 AK292971 NM_001003897 NM_022077	87071	+	TSC_hg19_v1_chr20_+_35918065 BC016822 BC014672	87121	+	AM392522|C20orf132|140699|chromosome 20 open reading frame 132##AM392819|C20orf132|140699|chromosome 20 open reading frame 132##BC030006|C20orf132|140699|chromosome 20 open reading frame 132##BC057767|C20orf132|140699|chromosome 20 open reading frame 132##NM_152503|C20orf132|140699|chromosome 20 open reading frame 132##NM_213631|C20orf132|140699|chromosome 20 open reading frame 132##NM_213632|C20orf132|140699|chromosome 20 open reading frame 132##AK093432|C20orf132|140699|chromosome 20 open reading frame 132##AK308683|RPN2|6185|ribophorin II##CR456899|RPN2|6185|ribophorin II##DQ892347|RPN2|6185|ribophorin II##DQ895552|RPN2|6185|ribophorin II##AK315801|RPN2|6185|ribophorin II##BC003560|RPN2|6185|ribophorin II##X00094|GHRH|2691|growth hormone releasing hormone##BC098109|GHRH|2691|growth hormone releasing hormone##BC098161|GHRH|2691|growth hormone releasing hormone##BC099727|GHRH|2691|growth hormone releasing hormone##NM_001184731|GHRH|2691|growth hormone releasing hormone##NM_021081|GHRH|2691|growth hormone releasing hormone##AK292971|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_001003897|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_022077|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC016822|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC014672|MANBAL|63905|mannosidase, beta A, lysosomal-like	0.084854	
chr3	178786655	178786836	reg1014506.p1	5.926	+	AF209747 NM_005832	-510193	+	BC017825 NM_181361	-532522	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1871686	-	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	2820	-	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	2881	-	TSC_hg19_v1_chr3_+_178866144 NM_006218 AK292940	79493	+	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3##NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	0.067771	
chrX	115066555	115066667	reg1024661.p1	5.926	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-238743	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-269569	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-271005	+	BC003645 TSC_hg19_v1_chrX_-_115085443	18828	-	AK313927 NM_000686 X87723 U16957	235384	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	501156	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.428908	CTCF.p2:-54:0.429
chr15	29987871	29987960	reg1024166.p2	5.925	+	NM_015307	-124989	-	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	-425886	-	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	-425945	-	AK304758 TSC_hg19_v1_chr15_-_30114336	126427	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	126708	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	697797	-	NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion	0.039117	
chr16	27246556	27246737	reg1002120.p2	5.925	+	AK297166 NM_001145348	-31351	+	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	-31819	+	NM_001145545 BC031257 AK311574	-168399	+	TSC_hg19_v1_chr16_-_27280055 AK315674	33406	-	TSC_hg19_v1_chr16_-_27280058 AF161451 AF161455 AK056795 NM_145080	33439	-	TSC_hg19_v1_chr16_+_27325254 AK314863 NM_000418 NM_001008699 AK303255	78608	+	AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##AK315674|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AF161451|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AF161455|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AK056795|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##NM_145080|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AK314863|IL4R|3566|interleukin 4 receptor##NM_000418|IL4R|3566|interleukin 4 receptor##NM_001008699|IL4R|3566|interleukin 4 receptor##AK303255|IL4R|3566|interleukin 4 receptor	0.0	
chr1	63782747	63782855	reg1022808.p2	5.925	+	TSC_hg19_v1_chr1_+_63249807 NM_032852 NM_178221 AK027773 BC018678 BC033024 BC008395	-532988	+	DQ341187 TSC_hg19_v1_chr1_-_63154045 AK055401 NM_033407 AK292640	-628674	-	NM_014495 AK315304 TSC_hg19_v1_chr1_+_63063190 AK289426 BC007059 BC058287 AY358273 AF152562 AB590604 CU691298	-719590	+	AB464527 NM_012183	5928	+	TSC_hg19_v1_chr1_+_63789065 L12142	6283	+	NM_013339 AF063604 TSC_hg19_v1_chr1_+_63833313	50486	+	NM_032852|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_178221|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##AK027773|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC018678|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC033024|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC008395|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##DQ341187|DOCK7|85440|dedicator of cytokinesis 7##AK055401|DOCK7|85440|dedicator of cytokinesis 7##NM_033407|DOCK7|85440|dedicator of cytokinesis 7##AK292640|DOCK7|85440|dedicator of cytokinesis 7##NM_014495|ANGPTL3|27329|angiopoietin-like 3##AK315304|ANGPTL3|27329|angiopoietin-like 3##AK289426|ANGPTL3|27329|angiopoietin-like 3##BC007059|ANGPTL3|27329|angiopoietin-like 3##BC058287|ANGPTL3|27329|angiopoietin-like 3##AY358273|ANGPTL3|27329|angiopoietin-like 3##AF152562|ANGPTL3|27329|angiopoietin-like 3##NM_012183|FOXD3|27022|forkhead box D3##L12142|FOXD3|27022|forkhead box D3##NM_013339|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF063604|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	0.966759	CTCF.p2:-16:0.967
chr1	28210856	28210994	reg1024366.p2	5.924	+	CR749321 BC132692 BC133049 NM_001039477 NM_001105556 NM_004848 TSC_hg19_v1_chr1_+_28199054 AK303141 HQ258751 BC031655 AK303090	-11853	+	AF126488 AX775985 TSC_hg19_v1_chr1_+_28157335 AK313814 AB464098 U14575	-53584	+	TSC_hg19_v1_chr1_+_28157334 AF061958 AK292077 AK297771 AK304619 NM_002713 NM_138558 AK307570 BC093017	-53597	+	CR450348 DQ892352 DQ895821 TSC_hg19_v1_chr1_-_28241083 J05249 BC001630 AK300691 AK312956 AK296898 AK298759 BC012157	30124	-	TSC_hg19_v1_chr1_-_28241258 BC021257 NM_002946	30339	-	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	50636	+	CR749321|C1orf38|9473|chromosome 1 open reading frame 38##BC132692|C1orf38|9473|chromosome 1 open reading frame 38##BC133049|C1orf38|9473|chromosome 1 open reading frame 38##NM_001039477|C1orf38|9473|chromosome 1 open reading frame 38##NM_001105556|C1orf38|9473|chromosome 1 open reading frame 38##NM_004848|C1orf38|9473|chromosome 1 open reading frame 38##AK303141|C1orf38|9473|chromosome 1 open reading frame 38##HQ258751|C1orf38|9473|chromosome 1 open reading frame 38##BC031655|C1orf38|9473|chromosome 1 open reading frame 38##AK303090|C1orf38|9473|chromosome 1 open reading frame 38##AF126488|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AX775985|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK313814|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##U14575|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AF061958|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK292077|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK297771|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK304619|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_002713|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_138558|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK307570|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##BC093017|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##CR450348|RPA2|6118|replication protein A2, 32kDa##DQ892352|RPA2|6118|replication protein A2, 32kDa##DQ895821|RPA2|6118|replication protein A2, 32kDa##J05249|RPA2|6118|replication protein A2, 32kDa##BC001630|RPA2|6118|replication protein A2, 32kDa##AK300691|RPA2|6118|replication protein A2, 32kDa##AK312956|RPA2|6118|replication protein A2, 32kDa##AK298759|RPA2|6118|replication protein A2, 32kDa##BC012157|RPA2|6118|replication protein A2, 32kDa##BC021257|RPA2|6118|replication protein A2, 32kDa##NM_002946|RPA2|6118|replication protein A2, 32kDa##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	0.931898	CTCF.p2:-16:0.932
chr21	30568736	30568889	reg1023705.p1	5.924	+	TSC_hg19_v1_chr21_+_30517918 AK309998 EF219160	-50902	+	AY171599 NM_020152	-115940	+	AK308063 TSC_hg19_v1_chr21_-_30445995 AK298801 BC072001 BC005220 NM_006585	-122823	-	TSC_hg19_v1_chr21_+_30671158 AK291021 AB002803	102352	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	102408	+	TSC_hg19_v1_chr21_+_30671242 AK313791 BC063307	102429	+	AK309998|C21orf7|56911|chromosome 21 open reading frame 7##EF219160|C21orf7|56911|chromosome 21 open reading frame 7##AY171599|C21orf7|56911|chromosome 21 open reading frame 7##NM_020152|C21orf7|56911|chromosome 21 open reading frame 7##AK308063|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK298801|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC072001|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC005220|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##NM_006585|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK291021|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AB002803|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AK313791|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC063307|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	0.0	
chr8	23021021	23021132	reg1023560.p1	5.924	+	NM_003841 AK298664 BC017852 TSC_hg19_v1_chr8_+_22960433 AK313213 AK298718 AF012536 AY358281 AF016267 AF033854 AF014794 BC125041 BC125042 AF020502 AF012629 CR541857	-60596	+	TSC_hg19_v1_chr8_-_22926545 AF192548 AF016266 AF016268 AF153687 AK291216 AF012535 AF016849 AY358277 BX538104 AK298602 BC001281 NM_003842 NM_147187	-94482	-	AB451272 AB451399 AF012628 AF018657 AF018658 AF020501 AF022386 CR541898 AB385139 TSC_hg19_v1_chr8_-_22926429	-94657	-	AF023849 AF021232 AF021233 AF029761 AY358285 BC052270 AK313528 NM_003840 TSC_hg19_v1_chr8_-_23021544	419	-	FJ795027 AB590225 BT006906 CU680426 DQ891791 DQ894973 JF729355 U90875 TSC_hg19_v1_chr8_-_23082598 AK291299 BC012866	61536	-	TSC_hg19_v1_chr8_-_23082664 NM_003844	61590	-	NM_003841|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298664|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC017852|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK313213|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298718|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012536|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AY358281|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF016267|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF033854|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF014794|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125041|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125042|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF020502|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012629|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##CR541857|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF192548|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016266|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016268|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF153687|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK291216|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012535|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016849|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AY358277|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BX538104|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK298602|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BC001281|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003842|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_147187|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AB451272|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AB451399|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012628|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018657|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018658|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF020501|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF022386|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##CR541898|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF023849|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF021232|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF021233|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF029761|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AY358285|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##BC052270|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AK313528|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##NM_003840|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##FJ795027|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BT006906|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ891791|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ894973|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##JF729355|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##U90875|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##AK291299|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BC012866|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##NM_003844|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a	0.0	
chr1	117477628	117477723	reg1023332.p2	5.923	+	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	-25033	+	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	-180568	+	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	-267292	-	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	66730	+	AK291017 TSC_hg19_v1_chr1_+_117602939	125249	+	TSC_hg19_v1_chr1_+_117602948 AF073771 NM_003594 AF080255 BC015341 BC030058	125279	+	AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3##AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule##AK291017|TTF2|8458|transcription termination factor, RNA polymerase II##AF073771|TTF2|8458|transcription termination factor, RNA polymerase II##NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II##AF080255|TTF2|8458|transcription termination factor, RNA polymerase II##BC015341|TTF2|8458|transcription termination factor, RNA polymerase II##BC030058|TTF2|8458|transcription termination factor, RNA polymerase II	0.093081	
chr20	13591003	13591112	reg1023736.p2	5.923	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	-388634	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	-601416	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-1692500	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	28507	-	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	174484	-	TSC_hg19_v1_chr20_+_13765698 NM_001039375 NM_024120 AK289781 AK091060 AX746757 BC073158 CU687252 BC005984	174696	+	NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_001039375|C20orf7|79133|chromosome 20 open reading frame 7##NM_024120|C20orf7|79133|chromosome 20 open reading frame 7##AK289781|C20orf7|79133|chromosome 20 open reading frame 7##AK091060|C20orf7|79133|chromosome 20 open reading frame 7##BC073158|C20orf7|79133|chromosome 20 open reading frame 7##BC005984|C20orf7|79133|chromosome 20 open reading frame 7	0.434371	CTCF.p2:-12:0.434
chr12	48680605	48680697	reg1022123.p1	5.922	+	AB587540 NM_001004134 BC136757 BC136758	-83530	-	TSC_hg19_v1_chr12_+_48592139 AK125945 CR749551	-88497	+	NM_001013635 AK056003 BC036801 TSC_hg19_v1_chr12_+_48577419 BC049387	-103246	+	AY302593 NM_181788 BC119787 BC118635	42137	+	AY842285 AK092740 AX747699 TSC_hg19_v1_chr12_-_48744649 BC018090 NM_001172681 NM_152320	63964	-	AK298064 NM_001172682	64373	-	NM_001004134|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1##BC136757|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1##BC136758|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1##AK125945|DKFZP779L1853|643162|uncharacterized LOC643162##CR749551|DKFZP779L1853|643162|uncharacterized LOC643162##NM_001013635|C12orf68|387856|chromosome 12 open reading frame 68##AK056003|C12orf68|387856|chromosome 12 open reading frame 68##BC036801|C12orf68|387856|chromosome 12 open reading frame 68##BC049387|C12orf68|387856|chromosome 12 open reading frame 68##AY302593|H1FNT|341567|H1 histone family, member N, testis-specific##NM_181788|H1FNT|341567|H1 histone family, member N, testis-specific##BC119787|H1FNT|341567|H1 histone family, member N, testis-specific##BC118635|H1FNT|341567|H1 histone family, member N, testis-specific##AY842285|ZNF641|121274|zinc finger protein 641##AK092740|ZNF641|121274|zinc finger protein 641##BC018090|ZNF641|121274|zinc finger protein 641##NM_001172681|ZNF641|121274|zinc finger protein 641##NM_152320|ZNF641|121274|zinc finger protein 641##AK298064|ZNF641|121274|zinc finger protein 641##NM_001172682|ZNF641|121274|zinc finger protein 641	0.498882	CTCF.p2:10:0.499
chr15	80805200	80805329	reg1024496.p2	5.922	+	AK295763 TSC_hg19_v1_chr15_+_80733623	-71659	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	-108530	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-359888	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	182398	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	182745	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	266457	+	AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199	1.096457	CTCF.p2:-25:0.956
chr20	17262272	17262395	reg1022880.p2	5.922	+	TSC_hg19_v1_chr20_+_17207684 BC005815 AK294200 AK312341 J05252 AB528512 DQ892675 DQ895917	-54518	+	BC001905 TSC_hg19_v1_chr20_+_17207673	-54662	+	NM_001201529 NM_002594 TSC_hg19_v1_chr20_+_17207617	-54723	+	AF039655 Y16717 TSC_hg19_v1_chr20_-_17512006 NM_001195	249659	-	AK316247 BC041483 NM_001161705	277209	-	NM_001011546 NM_006870 TSC_hg19_v1_chr20_+_17550756 AK315994 BC009477 AK312645 BX647319 S65738 AK302338	288406	+	BC005815|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK294200|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK312341|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##J05252|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##DQ892675|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##DQ895917|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201529|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AF039655|BFSP1|631|beaded filament structural protein 1, filensin##Y16717|BFSP1|631|beaded filament structural protein 1, filensin##NM_001195|BFSP1|631|beaded filament structural protein 1, filensin##AK316247|BFSP1|631|beaded filament structural protein 1, filensin##BC041483|BFSP1|631|beaded filament structural protein 1, filensin##NM_001161705|BFSP1|631|beaded filament structural protein 1, filensin##NM_001011546|DSTN|11034|destrin (actin depolymerizing factor)##NM_006870|DSTN|11034|destrin (actin depolymerizing factor)##AK315994|DSTN|11034|destrin (actin depolymerizing factor)##BC009477|DSTN|11034|destrin (actin depolymerizing factor)##AK312645|DSTN|11034|destrin (actin depolymerizing factor)##BX647319|DSTN|11034|destrin (actin depolymerizing factor)##S65738|DSTN|11034|destrin (actin depolymerizing factor)##AK302338|DSTN|11034|destrin (actin depolymerizing factor)	0.981376	CTCF.p2:-9:0.981
chr20	38788862	38788970	reg1023317.p2	5.922	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-1197927	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-1233848	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-1233927	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	528961	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	868578	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	868748	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.853797	CTCF.p2:-10:0.854
chr7	102923424	102923599	reg1025856.p2	5.922	+	AK097711 BC094802 BC023575 TSC_hg19_v1_chr7_-_102920949	-2610	-	AL834175 BC150309 TSC_hg19_v1_chr7_-_102920725 AK302046 BC068601 BC033022 AK131353	-2803	-	AY357337 TSC_hg19_v1_chr7_-_102789708 CR936639 NM_001122838 NM_198990	-133944	-	TSC_hg19_v1_chr7_+_102937894 NM_004279 AK057656 AK000994 AK289864 BC010398 AF054182 AK098616 AK297354 AK309928 DQ892913 DQ896162	14376	+	BC014079 TSC_hg19_v1_chr7_+_102937944	14430	+	BC125057 BC139751 BC046351 X98260 TSC_hg19_v1_chr7_-_102985295 BC012376 BC062703 BC056682 BC032854 NM_001129887 NM_014377	61682	-	AK097711|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC094802|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC023575|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##AL834175|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC150309|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##AK302046|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC068601|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC033022|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##AK131353|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##AY357337|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D##CR936639|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D##NM_001122838|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D##NM_198990|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D##NM_004279|PMPCB|9512|peptidase (mitochondrial processing) beta##AK057656|PMPCB|9512|peptidase (mitochondrial processing) beta##AK000994|PMPCB|9512|peptidase (mitochondrial processing) beta##AK289864|PMPCB|9512|peptidase (mitochondrial processing) beta##BC010398|PMPCB|9512|peptidase (mitochondrial processing) beta##AF054182|PMPCB|9512|peptidase (mitochondrial processing) beta##AK098616|PMPCB|9512|peptidase (mitochondrial processing) beta##AK297354|PMPCB|9512|peptidase (mitochondrial processing) beta##AK309928|PMPCB|9512|peptidase (mitochondrial processing) beta##DQ892913|PMPCB|9512|peptidase (mitochondrial processing) beta##DQ896162|PMPCB|9512|peptidase (mitochondrial processing) beta##BC014079|PMPCB|9512|peptidase (mitochondrial processing) beta##BC125057|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC139751|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC046351|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##X98260|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC012376|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC062703|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC056682|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC032854|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_001129887|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_014377|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2	0.998077	CTCF.p2:0:0.998
chr7	33374103	33374283	reg1024548.p2	5.922	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-205112	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-225216	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-271871	-	AK289963 NM_133468 AK096150 BC060868	570949	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	1323726	+	DQ287932 NM_015283	1703459	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	0.903591	CTCF.p2:-4:0.904
chr10	115847570	115847678	reg1021328.p2	5.921	+	NM_000684 J03019	-43815	+	TSC_hg19_v1_chr10_+_115614419 NM_198514 AK090631 AX746547	-233205	+	D42045 NM_014881 AK307187	-233708	-	TSC_hg19_v1_chr10_-_115933963 BC100670 BC103499 BC103504 BC105632 BC152306 BC107430 BC070368 BX537964 AK307517 AK092620 AX747632 BC020842 BC030557	86308	-	NM_018017	86739	-	AK122916 AL833340 NM_198795 BX648664 BC063133	91447	+	NM_000684|ADRB1|153|adrenergic, beta-1-, receptor##J03019|ADRB1|153|adrenergic, beta-1-, receptor##NM_198514|NHLRC2|374354|NHL repeat containing 2##AK090631|NHLRC2|374354|NHL repeat containing 2##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A##BC100670|C10orf118|55088|chromosome 10 open reading frame 118##BC103499|C10orf118|55088|chromosome 10 open reading frame 118##BC103504|C10orf118|55088|chromosome 10 open reading frame 118##BC105632|C10orf118|55088|chromosome 10 open reading frame 118##BC152306|C10orf118|55088|chromosome 10 open reading frame 118##BC107430|C10orf118|55088|chromosome 10 open reading frame 118##BC070368|C10orf118|55088|chromosome 10 open reading frame 118##BX537964|C10orf118|55088|chromosome 10 open reading frame 118##AK307517|C10orf118|55088|chromosome 10 open reading frame 118##AK092620|C10orf118|55088|chromosome 10 open reading frame 118##BC020842|C10orf118|55088|chromosome 10 open reading frame 118##BC030557|C10orf118|55088|chromosome 10 open reading frame 118##NM_018017|C10orf118|55088|chromosome 10 open reading frame 118##AK122916|TDRD1|56165|tudor domain containing 1##AL833340|TDRD1|56165|tudor domain containing 1##NM_198795|TDRD1|56165|tudor domain containing 1##BX648664|TDRD1|56165|tudor domain containing 1##BC063133|TDRD1|56165|tudor domain containing 1	0.024403	
chr15	59664939	59665089	reg1024926.p2	5.921	+	AY642121 BC022034 AY009108 NM_033195 AK312777 AK058192	-165962	+	TSC_hg19_v1_chr15_+_59397344 NM_004701 AK001404 AL080146 BC105086 BC105112 AF087910 AK222611 AB020981 AF002822 AB587333 AM393577 BT019458 CR533527	-267643	+	TSC_hg19_v1_chr15_+_59359061 AK095327	-305936	+	AB290177 TSC_hg19_v1_chr15_-_59665055	40	-	TSC_hg19_v1_chr15_-_59665065 AK291688	52	-	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	56	-	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B##BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_004701|CCNB2|9133|cyclin B2##AK001404|CCNB2|9133|cyclin B2##AL080146|CCNB2|9133|cyclin B2##BC105086|CCNB2|9133|cyclin B2##BC105112|CCNB2|9133|cyclin B2##AF087910|CCNB2|9133|cyclin B2##AK222611|CCNB2|9133|cyclin B2##AB020981|CCNB2|9133|cyclin B2##AF002822|CCNB2|9133|cyclin B2##AM393577|CCNB2|9133|cyclin B2##BT019458|CCNB2|9133|cyclin B2##CR533527|CCNB2|9133|cyclin B2##AK095327|RNF111|54778|ring finger protein 111##AB290177|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE	0.0	
chr16	50769899	50770051	reg1021013.p2	5.921	+	AF178930 AY187243 NM_022162 AY187244 AY187246 AB527390	-38874	+	TSC_hg19_v1_chr16_-_50715246 NM_001144972 NM_153337 NM_182854	-54674	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	-54798	-	NM_001042355 NM_015247 TSC_hg19_v1_chr16_+_50775996 AK292975 AK225202 AJ250014 AK310832 AK056226	6009	+	TSC_hg19_v1_chr16_+_50776066 AF161542 NM_001042412 BC012342	6083	+	AK307835 NM_001127892	414532	-	AF178930|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187243|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_022162|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187244|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187246|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_001144972|SNX20|124460|sorting nexin 20##NM_153337|SNX20|124460|sorting nexin 20##NM_182854|SNX20|124460|sorting nexin 20##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20##NM_001042355|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_015247|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK292975|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK225202|CYLD|1540|cylindromatosis (turban tumor syndrome)##AJ250014|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK310832|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK056226|CYLD|1540|cylindromatosis (turban tumor syndrome)##AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)##BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK307835|SALL1|6299|sal-like 1 (Drosophila)##NM_001127892|SALL1|6299|sal-like 1 (Drosophila)	0.0	
chr16	57373629	57373810	reg1024297.p1	5.921	+	TSC_hg19_v1_chr16_-_57318585 AK130584 AK313910 NM_015993	-55140	-	CU678172 BC002760 TSC_hg19_v1_chr16_-_57318556 AK289599 AF137386	-55208	-	TSC_hg19_v1_chr16_+_57279154 AK075050 NM_012106 BC003087 AK311018 AK298758	-94586	+	NM_002990 AK311970 U83171 U83239 BC027952 CU693342 AB590299 DQ890922 DQ893311 DQ894072 DQ896625 EU176526	18991	+	AK222692 TSC_hg19_v1_chr16_+_57406382	32666	+	TSC_hg19_v1_chr16_+_57406401 AK223351 AK313806 U84487 U91835 BC001163 BC016164 NM_002996 AB590256 DQ890704 DQ891871 DQ893888 DQ895059 CU674588 CR457426	32720	+	AK130584|PLLP|51090|plasmolipin##AK313910|PLLP|51090|plasmolipin##NM_015993|PLLP|51090|plasmolipin##BC002760|PLLP|51090|plasmolipin##AK289599|PLLP|51090|plasmolipin##AF137386|PLLP|51090|plasmolipin##AK075050|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##NM_012106|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##BC003087|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##AK311018|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##AK298758|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##NM_002990|CCL22|6367|chemokine (C-C motif) ligand 22##AK311970|CCL22|6367|chemokine (C-C motif) ligand 22##U83171|CCL22|6367|chemokine (C-C motif) ligand 22##U83239|CCL22|6367|chemokine (C-C motif) ligand 22##BC027952|CCL22|6367|chemokine (C-C motif) ligand 22##DQ890922|CCL22|6367|chemokine (C-C motif) ligand 22##DQ893311|CCL22|6367|chemokine (C-C motif) ligand 22##DQ894072|CCL22|6367|chemokine (C-C motif) ligand 22##DQ896625|CCL22|6367|chemokine (C-C motif) ligand 22##EU176526|CCL22|6367|chemokine (C-C motif) ligand 22##AK222692|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK223351|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK313806|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U84487|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U91835|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC001163|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC016164|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002996|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ890704|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ891871|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ893888|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ895059|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##CR457426|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1	0.0	
chr6	70876366	70876486	reg1024666.p2	5.921	+	AK309023 TSC_hg19_v1_chr6_+_70577418	-299064	+	D38163 NM_001858 AK310621 BC070177 BC113362 BC113364	-299963	+	TSC_hg19_v1_chr6_-_70506885 BC047073 NM_018368	-369481	-	X54413 BC008620 BC063646 NM_078485	116406	-	X54412 BC015409 TSC_hg19_v1_chr6_-_71012827 NM_001851	136374	-	TSC_hg19_v1_chr6_+_71123122 NM_001105531 NM_020819	246687	+	D38163|COL19A1|1310|collagen, type XIX, alpha 1##NM_001858|COL19A1|1310|collagen, type XIX, alpha 1##AK310621|COL19A1|1310|collagen, type XIX, alpha 1##BC070177|COL19A1|1310|collagen, type XIX, alpha 1##BC113362|COL19A1|1310|collagen, type XIX, alpha 1##BC113364|COL19A1|1310|collagen, type XIX, alpha 1##BC047073|LMBRD1|55788|LMBR1 domain containing 1##NM_018368|LMBRD1|55788|LMBR1 domain containing 1##X54413|COL9A1|1297|collagen, type IX, alpha 1##BC008620|COL9A1|1297|collagen, type IX, alpha 1##BC063646|COL9A1|1297|collagen, type IX, alpha 1##NM_078485|COL9A1|1297|collagen, type IX, alpha 1##X54412|COL9A1|1297|collagen, type IX, alpha 1##BC015409|COL9A1|1297|collagen, type IX, alpha 1##NM_001851|COL9A1|1297|collagen, type IX, alpha 1##NM_001105531|FAM135A|57579|family with sequence similarity 135, member A##NM_020819|FAM135A|57579|family with sequence similarity 135, member A	0.14393	
chr11	1846317	1846425	reg1022456.p1	5.920	+	TSC_hg19_v1_chr11_-_1785210 NM_001909	-61136	-	TSC_hg19_v1_chr11_-_1785158 BC016320 M11233	-61214	-	AK130178 TSC_hg19_v1_chr11_-_1785104	-61267	-	NM_138567 AK075202 BC144657 BC144659 BC144660 BC144661	9346	+	NM_003282	13861	+	BC032148 NM_001145829	14347	+	NM_001909|CTSD|1509|cathepsin D##BC016320|CTSD|1509|cathepsin D##M11233|CTSD|1509|cathepsin D##AK130178|CTSD|1509|cathepsin D##NM_138567|SYT8|90019|synaptotagmin VIII##AK075202|SYT8|90019|synaptotagmin VIII##BC144657|SYT8|90019|synaptotagmin VIII##BC144659|SYT8|90019|synaptotagmin VIII##BC144660|SYT8|90019|synaptotagmin VIII##BC144661|SYT8|90019|synaptotagmin VIII##NM_003282|TNNI2|7136|troponin I type 2 (skeletal, fast)##BC032148|TNNI2|7136|troponin I type 2 (skeletal, fast)##NM_001145829|TNNI2|7136|troponin I type 2 (skeletal, fast)	0.659479	CTCF.p2:-20:0.659
chr2	190212300	190212418	reg1023927.p1	5.920	+	AB384824 J04478 Y14690 AB209045 BC086874 AK297936 TSC_hg19_v1_chr2_-_190044488 AK300146 M31365 NM_000393	-167892	-	TSC_hg19_v1_chr2_+_189839133 AB384877 X07240	-373186	+	X14420 BX649097 TSC_hg19_v1_chr2_+_189839117	-373241	+	BC040567 NM_032168 TSC_hg19_v1_chr2_+_190306177	93811	+	TSC_hg19_v1_chr2_+_190306204 AK022607 AK290445 CR749440 AK022581 AK091546 AX747050	93850	+	AF171087 AF215636 AF226614 AF231121 AL136944 BC035893 TSC_hg19_v1_chr2_-_190445510 AK223236 AK292146 AK314827	233130	-	J04478|COL5A2|1290|collagen, type V, alpha 2##Y14690|COL5A2|1290|collagen, type V, alpha 2##AB209045|COL5A2|1290|collagen, type V, alpha 2##BC086874|COL5A2|1290|collagen, type V, alpha 2##AK297936|COL5A2|1290|collagen, type V, alpha 2##AK300146|COL5A2|1290|collagen, type V, alpha 2##M31365|COL5A2|1290|collagen, type V, alpha 2##NM_000393|COL5A2|1290|collagen, type V, alpha 2##X07240|COL3A1|1281|collagen, type III, alpha 1##X14420|COL3A1|1281|collagen, type III, alpha 1##BC040567|WDR75|84128|WD repeat domain 75##NM_032168|WDR75|84128|WD repeat domain 75##AK022607|WDR75|84128|WD repeat domain 75##AK290445|WDR75|84128|WD repeat domain 75##CR749440|WDR75|84128|WD repeat domain 75##AK022581|WDR75|84128|WD repeat domain 75##AK091546|WDR75|84128|WD repeat domain 75##AF171087|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF215636|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF226614|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF231121|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AL136944|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##BC035893|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK223236|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK292146|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK314827|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1	0.093641	
chr14	58829648	58829828	reg1024636.p2	5.919	+	TSC_hg19_v1_chr14_+_58765292 BC047301 S66427	-64420	+	TSC_hg19_v1_chr14_+_58765261 NM_002892 NM_023000 NM_023001 AK307520 BC026230	-64497	+	TSC_hg19_v1_chr14_-_58764845 AK055868 BC034618 CR627086 BC104151 BC104152 BC112973 BC112974 AK297601	-64905	-	AY358266 NM_207377 BC137557 BC137563 BC144709	32906	+	AF150100 TSC_hg19_v1_chr14_-_58893893 AK000666 AK312095	64150	-	AK302836 NM_001244189 NM_001244190 NM_001244191 NM_001244192 AB011158 AK302635 AY359881	64389	+	S66427|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)##NM_002892|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)##NM_023000|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)##NM_023001|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)##AK307520|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)##BC026230|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)##AK055868|FLJ31306|379025|uncharacterized LOC379025##BC034618|FLJ31306|379025|uncharacterized LOC379025##CR627086|FLJ31306|379025|uncharacterized LOC379025##BC104151|FLJ31306|379025|uncharacterized LOC379025##BC104152|FLJ31306|379025|uncharacterized LOC379025##BC112973|FLJ31306|379025|uncharacterized LOC379025##BC112974|FLJ31306|379025|uncharacterized LOC379025##AY358266|TOMM20L|387990|translocase of outer mitochondrial membrane 20 homolog (yeast)-like##NM_207377|TOMM20L|387990|translocase of outer mitochondrial membrane 20 homolog (yeast)-like##BC137557|TOMM20L|387990|translocase of outer mitochondrial membrane 20 homolog (yeast)-like##BC137563|TOMM20L|387990|translocase of outer mitochondrial membrane 20 homolog (yeast)-like##BC144709|TOMM20L|387990|translocase of outer mitochondrial membrane 20 homolog (yeast)-like##AF150100|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)##AK000666|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)##AK312095|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)##AK302836|KIAA0586|9786|KIAA0586##NM_001244189|KIAA0586|9786|KIAA0586##NM_001244190|KIAA0586|9786|KIAA0586##NM_001244191|KIAA0586|9786|KIAA0586##NM_001244192|KIAA0586|9786|KIAA0586##AB011158|KIAA0586|9786|KIAA0586##AK302635|KIAA0586|9786|KIAA0586##AY359881|KIAA0586|9786|KIAA0586	0.997371	CTCF.p2:-14:0.997
chr15	80142252	80142373	reg1022485.p2	5.919	+	AB028947 NM_015206 BC152466	-417453	+	TSC_hg19_v1_chr15_+_79603557 AJ132270 CR457384	-538745	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	-538809	+	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	47068	-	NM_001199758	47314	-	AL109714 NM_001100879	65285	-	AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##AJ132270|TMED3|23423|transmembrane emp24 protein transport domain containing 3##CR457384|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL109714|ST20|400410|suppressor of tumorigenicity 20##NM_001100879|ST20|400410|suppressor of tumorigenicity 20	0.998404	CTCF.p2:4:0.998
chr18	61007252	61007362	reg1023526.p1	5.919	+	TSC_hg19_v1_chr18_-_60987309 M13994	-20021	-	TSC_hg19_v1_chr18_-_60986977 X06487	-20314	-	BC027258 NM_000633 NM_000657	-20747	-	AB529042 BT006782 AK312360 TSC_hg19_v1_chr18_-_61034440 AK297670 AK025120 X63657 BC008797 NM_002035	27120	-	CU691728 EU831666 EU831748 AY232629 TSC_hg19_v1_chr18_-_61089613	82248	-	TSC_hg19_v1_chr18_-_61089648 AK291253	82340	-	M13994|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##BT006782|KDSR|2531|3-ketodihydrosphingosine reductase##AK312360|KDSR|2531|3-ketodihydrosphingosine reductase##AK297670|KDSR|2531|3-ketodihydrosphingosine reductase##AK025120|KDSR|2531|3-ketodihydrosphingosine reductase##X63657|KDSR|2531|3-ketodihydrosphingosine reductase##BC008797|KDSR|2531|3-ketodihydrosphingosine reductase##NM_002035|KDSR|2531|3-ketodihydrosphingosine reductase##EU831666|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##EU831748|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AY232629|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK291253|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)	0.151287	
chr20	20164932	20165088	reg1026523.p1	5.919	+	NM_001167816 AL117439	-127690	+	BC144222 AF255443 AF318303 AF318304 AF318305 NM_016652	-128323	-	AK307817 NM_015585 AK304174 BC028708	-131834	+	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	183744	+	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	528218	-	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	941654	+	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AK307817|C20orf26|26074|chromosome 20 open reading frame 26##NM_015585|C20orf26|26074|chromosome 20 open reading frame 26##AK304174|C20orf26|26074|chromosome 20 open reading frame 26##BC028708|C20orf26|26074|chromosome 20 open reading frame 26##M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1	0.577011	CTCF.p2:-6:0.577
chr2	242640763	242640853	reg1024142.p1	5.919	+	AB593140 TSC_hg19_v1_chr2_+_242626482	-14332	+	TSC_hg19_v1_chr2_-_242626231 AK223434 BC147006 BC147010 BC171894 BC171902 BC171903 NM_001165031 NM_012145	-14505	-	CR541986 CR542015 TSC_hg19_v1_chr2_-_242626210 X54729 BC001827	-14598	-	TSC_hg19_v1_chr2_+_242641311 AK289958 AK074422 NM_032329 AK300790 BC005370 BC071899 AF189286 AB527747 CU675145 CU687190 EU832330 EU832415	587	+	TSC_hg19_v1_chr2_+_242674044 AK304764 AK094149 BC071598 NM_152783 AK091725 AK304773 AX747146 BC036604	33233	+	AB040610 NM_022134 BC117293 BC117295	75472	+	AK223434|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC147006|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC147010|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171894|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171902|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171903|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##NM_001165031|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##NM_012145|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##CR541986|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##CR542015|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##X54729|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC001827|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##AK289958|ING5|84289|inhibitor of growth family, member 5##AK074422|ING5|84289|inhibitor of growth family, member 5##NM_032329|ING5|84289|inhibitor of growth family, member 5##BC005370|ING5|84289|inhibitor of growth family, member 5##BC071899|ING5|84289|inhibitor of growth family, member 5##AF189286|ING5|84289|inhibitor of growth family, member 5##AK304764|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK094149|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##BC071598|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##NM_152783|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK091725|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK304773|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##BC036604|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AB040610|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##NM_022134|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##BC117293|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##BC117295|GAL3ST2|64090|galactose-3-O-sulfotransferase 2	0.0	
chr2	63652097	63652203	reg1023038.p2	5.919	+	NM_014562 TSC_hg19_v1_chr2_+_63277964 AK095680 AK297308 BC007621	-374185	+	NM_001199770	-374959	+	BC029477 NM_001142614	-718120	+	TSC_hg19_v1_chr2_-_63815560 AK310290	163390	-	TSC_hg19_v1_chr2_-_63815583 BX538331 AK055030 AL833623	163467	-	NM_005917	163592	+	NM_014562|OTX1|5013|orthodenticle homeobox 1##AK095680|OTX1|5013|orthodenticle homeobox 1##AK297308|OTX1|5013|orthodenticle homeobox 1##BC007621|OTX1|5013|orthodenticle homeobox 1##NM_001199770|OTX1|5013|orthodenticle homeobox 1##BC029477|EHBP1|23301|EH domain binding protein 1##NM_001142614|EHBP1|23301|EH domain binding protein 1##AK310290|WDPCP|51057|WD repeat containing planar cell polarity effector##BX538331|WDPCP|51057|WD repeat containing planar cell polarity effector##AK055030|WDPCP|51057|WD repeat containing planar cell polarity effector##AL833623|WDPCP|51057|WD repeat containing planar cell polarity effector##NM_005917|MDH1|4190|malate dehydrogenase 1, NAD (soluble)	0.809153	CTCF.p2:3:0.809
chr1	113615345	113615500	reg1014233.p1	5.918	+	TSC_hg19_v1_chr1_+_113499054 BC023568 BC047723 BC062295 BX648855	-116389	+	TSC_hg19_v1_chr1_-_113498861 AK303603 AJ438943 NM_003051	-116521	-	BC045664 AK094064 NM_001166496 AF239919 AL162079 TSC_hg19_v1_chr1_-_113498818 AK296688 AK312500 BC026317	-116705	-	TSC_hg19_v1_chr1_+_113615809 AK291031 CR936669 AB018349 NM_014813 AL161998	393	+	TSC_hg19_v1_chr1_+_113615865 BC117368 BC117370 AB527394	524	+	BC130409 BC144144 NM_001142782 NM_152900	318052	+	BC062295|LOC100506392|100506392|uncharacterized LOC100506392##BX648855|LOC100506392|100506392|uncharacterized LOC100506392##AK303603|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AJ438943|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_003051|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC045664|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK094064|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_001166496|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AF239919|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AL162079|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK296688|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK312500|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC026317|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK291031|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##CR936669|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AB018349|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##NM_014813|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AL161998|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC117368|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC117370|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC130409|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##BC144144|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_001142782|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_152900|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3	0.662094	CTCF.p2:-30:0.662
chr2	242212547	242212651	reg1037756.p1	5.918	+	TSC_hg19_v1_chr2_-_242212511 AK309075	-83	-	TSC_hg19_v1_chr2_-_242212245 AK300312 NM_001243900 NM_203346	-355	-	TSC_hg19_v1_chr2_-_242212216 M64098	-379	-	BC014455 NM_001008491 NM_006155 TSC_hg19_v1_chr2_+_242254810 D63878	42168	+	TSC_hg19_v1_chr2_-_242255074 BC001179 AK296684 AK312335	42436	-	BX647759 NM_005336 TSC_hg19_v1_chr2_-_242255118	42519	-	AK309075|HDLBP|3069|high density lipoprotein binding protein##AK300312|HDLBP|3069|high density lipoprotein binding protein##NM_001243900|HDLBP|3069|high density lipoprotein binding protein##NM_203346|HDLBP|3069|high density lipoprotein binding protein##M64098|HDLBP|3069|high density lipoprotein binding protein##BC014455|SEPT2|4735|septin 2##NM_001008491|SEPT2|4735|septin 2##NM_006155|SEPT2|4735|septin 2##D63878|SEPT2|4735|septin 2##BC001179|HDLBP|3069|high density lipoprotein binding protein##AK296684|HDLBP|3069|high density lipoprotein binding protein##AK312335|HDLBP|3069|high density lipoprotein binding protein##BX647759|HDLBP|3069|high density lipoprotein binding protein##NM_005336|HDLBP|3069|high density lipoprotein binding protein	0.0	
chr5	169232432	169232578	reg1011085.p1	5.918	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-168205	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-168261	+	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	-221784	+	AK055998 NM_001129891	175238	-	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	300466	+	BC030767 NM_001102609 BC092511	427491	+	D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58	0.0	
chr5	172199551	172199732	reg1016521.p2	5.918	+	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	-1430	-	AF275799 TSC_hg19_v1_chr5_-_172083715	-115998	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-131388	+	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	61677	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	186807	+	NM_003945 TSC_hg19_v1_chr5_+_172410801 BC119715 BC119714 AK312068 Y15286	211141	+	X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1##NM_003945|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119715|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119714|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##AK312068|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##Y15286|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1	0.010086	
chr7	23053932	23054045	reg1024714.p2	5.918	+	TSC_hg19_v1_chr7_-_23053750 BC018710 NM_032581	-238	-	AB030241 AK056319 AK297399 TSC_hg19_v1_chr7_-_23053708 AL833296	-293	-	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	-191545	-	TSC_hg19_v1_chr7_+_23145396 NM_001031710 NM_001172428 AK297421 AK056390	91384	+	TSC_hg19_v1_chr7_+_23145403 AK297595 AL136597 AK296219 AK297369 BC039585 BC009555 AF111113 AK290479 EF560731 EU831631 EU831716 EU831829	91536	+	NM_018846	91928	+	BC018710|FAM126A|84668|family with sequence similarity 126, member A##NM_032581|FAM126A|84668|family with sequence similarity 126, member A##AB030241|FAM126A|84668|family with sequence similarity 126, member A##AK056319|FAM126A|84668|family with sequence similarity 126, member A##AK297399|FAM126A|84668|family with sequence similarity 126, member A##AL833296|FAM126A|84668|family with sequence similarity 126, member A##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_001031710|KLHL7|55975|kelch-like 7 (Drosophila)##NM_001172428|KLHL7|55975|kelch-like 7 (Drosophila)##AK297421|KLHL7|55975|kelch-like 7 (Drosophila)##AK056390|KLHL7|55975|kelch-like 7 (Drosophila)##AK297595|KLHL7|55975|kelch-like 7 (Drosophila)##AL136597|KLHL7|55975|kelch-like 7 (Drosophila)##AK296219|KLHL7|55975|kelch-like 7 (Drosophila)##AK297369|KLHL7|55975|kelch-like 7 (Drosophila)##BC039585|KLHL7|55975|kelch-like 7 (Drosophila)##BC009555|KLHL7|55975|kelch-like 7 (Drosophila)##AF111113|KLHL7|55975|kelch-like 7 (Drosophila)##AK290479|KLHL7|55975|kelch-like 7 (Drosophila)##EF560731|KLHL7|55975|kelch-like 7 (Drosophila)##EU831631|KLHL7|55975|kelch-like 7 (Drosophila)##EU831716|KLHL7|55975|kelch-like 7 (Drosophila)##EU831829|KLHL7|55975|kelch-like 7 (Drosophila)##NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)	0.0	
chr18	3596811	3596924	reg1022282.p1	5.917	+	TSC_hg19_v1_chr18_+_3594077 AK093095 AX747919 BC137437	-2725	+	NM_173211	-143096	+	TSC_hg19_v1_chr18_+_3451599 NM_170695 NM_173210 AK307230 BC031268	-145236	+	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	248463	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	277417	-	AK294777 AK294717 NM_001242762 NM_001242763	277860	-	AK093095|FLJ35776|649446|uncharacterized LOC649446##BC137437|FLJ35776|649446|uncharacterized LOC649446##NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1##NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1##BC031268|TGIF1|7050|TGFB-induced factor homeobox 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	0.160966	
chr21	9857105	9857218	reg1021881.p2	5.917	+	None	None	None	None	None	None	None	None	None	AK308254 AK314285 TSC_hg19_v1_chr21_-_10990898 AF007118 AF495908 AY219886 AY219887 AY219888 AL833345 BC028719 NM_199259 NM_199260 NM_199261	1133737	-	BC101132 BC101133 BC101134 BC107038 BC107039 BC113810 AF218570 AF339514 AF339515 AF339516 NM_181704 NM_182481 NM_182482 NM_182484 AF527550 AF527551 AF527553 NM_001187 U19180 BC017024 TSC_hg19_v1_chr21_-_11098961 AK292540 BC064647	1241738	-	AY172978 NM_174981 AY465173	5125338	+	AK308254|TPTE|7179|transmembrane phosphatase with tensin homology##AK314285|TPTE|7179|transmembrane phosphatase with tensin homology##AF007118|TPTE|7179|transmembrane phosphatase with tensin homology##AF495908|TPTE|7179|transmembrane phosphatase with tensin homology##AY219886|TPTE|7179|transmembrane phosphatase with tensin homology##AY219887|TPTE|7179|transmembrane phosphatase with tensin homology##AY219888|TPTE|7179|transmembrane phosphatase with tensin homology##AL833345|TPTE|7179|transmembrane phosphatase with tensin homology##BC028719|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199259|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199260|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199261|TPTE|7179|transmembrane phosphatase with tensin homology##BC101132|BAGE2|85319|B melanoma antigen family, member 2##BC101133|BAGE2|85319|B melanoma antigen family, member 2##BC101134|BAGE3|85318|B melanoma antigen family, member 3##BC107038|BAGE|574|B melanoma antigen##BC107039|BAGE|574|B melanoma antigen##BC113810|BAGE|574|B melanoma antigen##AF218570|BAGE2|85319|B melanoma antigen family, member 2##AF339514|BAGE3|85318|B melanoma antigen family, member 3##AF339515|BAGE4|85317|B melanoma antigen family, member 4##AF339516|BAGE5|85316|B melanoma antigen family, member 5##NM_181704|BAGE4|85317|B melanoma antigen family, member 4##NM_182481|BAGE3|85318|B melanoma antigen family, member 3##NM_182482|BAGE2|85319|B melanoma antigen family, member 2##NM_182484|BAGE5|85316|B melanoma antigen family, member 5##AF527550|BAGE|574|B melanoma antigen##AF527551|BAGE|574|B melanoma antigen##AF527553|BAGE|574|B melanoma antigen##NM_001187|BAGE|574|B melanoma antigen##U19180|BAGE|574|B melanoma antigen##AK292540|BAGE2|85319|B melanoma antigen family, member 2##AY172978|POTED|317754|POTE ankyrin domain family, member D##NM_174981|POTED|317754|POTE ankyrin domain family, member D##AY465173|POTEB|339010|POTE ankyrin domain family, member B	0.978389	CTCF.p2:9:0.978
chr1	19292325	19292453	reg1022768.p1	5.916	+	TSC_hg19_v1_chr1_-_19282773 NM_001136265	-9590	-	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-63235	-	AK294552 NM_001161504	-75005	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	244357	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	285603	-	AK075563 AK291618 TSC_hg19_v1_chr1_-_19578019	285628	-	NM_001136265|IFFO2|126917|intermediate filament family orphan 2##DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090##AK075563|KIAA0090|23065|KIAA0090##AK291618|KIAA0090|23065|KIAA0090	0.0	
chr3	133297598	133297708	reg1023334.p2	5.916	+	TSC_hg19_v1_chr3_+_133293256 AK096865 NM_001134423	-4375	+	TSC_hg19_v1_chr3_+_133292835 BC007338	-4859	+	TSC_hg19_v1_chr3_+_133292588 AF103803	-5081	+	BC126209 TSC_hg19_v1_chr3_-_133380768 AB019397 BC151237 D87448 AK302584 BC032633 NM_007027	83045	-	AJ252279 NM_001063 TSC_hg19_v1_chr3_+_133465083	167330	+	BC045772 TSC_hg19_v1_chr3_+_133465111	167458	+	AK096865|CDV3|55573|CDV3 homolog (mouse)##NM_001134423|CDV3|55573|CDV3 homolog (mouse)##BC007338|CDV3|55573|CDV3 homolog (mouse)##AF103803|CDV3|55573|CDV3 homolog (mouse)##BC126209|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##AB019397|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##BC151237|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##D87448|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##AK302584|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##BC032633|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##NM_007027|TOPBP1|11073|topoisomerase (DNA) II binding protein 1##AJ252279|TF|7018|transferrin##NM_001063|TF|7018|transferrin##BC045772|TF|7018|transferrin	0.828641	CTCF.p2:1:0.829
chr13	47479512	47479618	reg1023633.p1	5.915	+	AK314132 BX647777 AK302787 NM_000621 NM_001165947	-8498	-	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	-108250	-	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-352058	+	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1095886	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	1132249	+	TSC_hg19_v1_chr13_-_48612129 AK316271	1132543	-	AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##AK316271|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.04819	
chr17	38029076	38029195	reg1021757.p1	5.915	+	AK292383 NM_198844 NM_199321 BC043152 AY251603 AY251604	-4692	+	BC032707 AF129512 AY377973 AY377975 AY377976 AY377977 AY377978 AY377979 AY377980 AY377981 AY377982 NM_012481 NM_183228 NM_183229 NM_183230 NM_183231 NM_183232	-8705	-	AK290115 NM_001242443	-132916	+	AF119884 NM_018530	44657	-	AK000409 AK296607 NM_001042471 NM_001165958 NM_001165959	45737	-	BC054042 BC050710 AF151043 BC000638 BC018837 TSC_hg19_v1_chr17_-_38078103	48871	-	AK292383|ZPBP2|124626|zona pellucida binding protein 2##NM_198844|ZPBP2|124626|zona pellucida binding protein 2##NM_199321|ZPBP2|124626|zona pellucida binding protein 2##BC043152|ZPBP2|124626|zona pellucida binding protein 2##AY251603|ZPBP2|124626|zona pellucida binding protein 2##AY251604|ZPBP2|124626|zona pellucida binding protein 2##BC032707|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AF129512|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377973|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377975|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377976|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377977|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377978|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377979|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377980|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377981|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377982|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_012481|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183228|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183229|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183230|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183231|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183232|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AK290115|GRB7|2886|growth factor receptor-bound protein 7##NM_001242443|GRB7|2886|growth factor receptor-bound protein 7##AF119884|GSDMB|55876|gasdermin B##NM_018530|GSDMB|55876|gasdermin B##AK000409|GSDMB|55876|gasdermin B##AK296607|GSDMB|55876|gasdermin B##NM_001042471|GSDMB|55876|gasdermin B##NM_001165958|GSDMB|55876|gasdermin B##NM_001165959|GSDMB|55876|gasdermin B##BC054042|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC050710|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF151043|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC000638|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC018837|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)	0.0	
chr17	56598328	56598418	reg1023617.p1	5.915	+	AF264717 TSC_hg19_v1_chr17_-_56595226 BC035609 NM_004687	-3130	-	TSC_hg19_v1_chr17_-_56591953 AK308877	-6431	-	BC115385 BC115386 BC033017 BC033020 NM_001080439 TSC_hg19_v1_chr17_-_56565791	-32624	-	CR457111 D89278 AK091065 AX746762 AB002110 AF073312 U88829 BC128255 BC128515 AB008753 AK315045 BC142968 TSC_hg19_v1_chr17_-_56606678	8234	-	AK314528 TSC_hg19_v1_chr17_-_56606712 NM_004574	8370	-	BC018055 TSC_hg19_v1_chr17_-_56609363	10989	-	AF264717|MTMR4|9110|myotubularin related protein 4##BC035609|MTMR4|9110|myotubularin related protein 4##NM_004687|MTMR4|9110|myotubularin related protein 4##AK308877|MTMR4|9110|myotubularin related protein 4##BC115385|HSF5|124535|heat shock transcription factor family member 5##BC115386|HSF5|124535|heat shock transcription factor family member 5##BC033017|HSF5|124535|heat shock transcription factor family member 5##BC033020|HSF5|124535|heat shock transcription factor family member 5##NM_001080439|HSF5|124535|heat shock transcription factor family member 5##CR457111|SEPT4|5414|septin 4##D89278|SEPT4|5414|septin 4##AK091065|SEPT4|5414|septin 4##AB002110|SEPT4|5414|septin 4##AF073312|SEPT4|5414|septin 4##U88829|SEPT4|5414|septin 4##BC128255|SEPT4|5414|septin 4##BC128515|SEPT4|5414|septin 4##AB008753|SEPT4|5414|septin 4##AK315045|SEPT4|5414|septin 4##BC142968|SEPT4|5414|septin 4##AK314528|SEPT4|5414|septin 4##NM_004574|SEPT4|5414|septin 4##BC018055|SEPT4|5414|septin 4	0.0	
chr2	108801041	108801148	reg1023938.p1	5.915	+	AK315280 AB084377 AK300801 AB043997 NM_021815 BC111525 BC111524	-198092	+	NM_182588 TSC_hg19_v1_chr2_+_108443399	-357700	+	TSC_hg19_v1_chr2_-_107503517 AX795200 AB059555 BC008680 AK307784 NM_001142352 NM_032528 FJ433883	-1297548	-	AB528243 NM_001008743	62556	+	AF186252 AF186255 NM_001056 NM_176825 AF186251 AF186254 AK297086 AK313193 AK298306 U66036 AF186253 AF186256 AB008164 AF026303 BC005353	104191	+	BC058861 NM_006588 AK298755 AF055584 AK297851 BC125043	193409	+	AK315280|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB084377|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AK300801|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB043997|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_021815|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111525|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111524|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_182588|RGPD4|285190|RANBP2-like and GRIP domain containing 4##AB059555|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##BC008680|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##AK307784|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142352|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_032528|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3##AF186252|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186255|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001056|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_176825|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186251|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186254|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK297086|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK313193|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK298306|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##U66036|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186253|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186256|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AB008164|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF026303|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC005353|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC058861|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##NM_006588|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK298755|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK297851|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##BC125043|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4	0.224644	CTCF.p2:-11:0.225
chr1	180748084	180748197	reg1023337.p1	5.914	+	AF099082 TSC_hg19_v1_chr1_+_180601194 AF115389 CU691970	-146863	+	TSC_hg19_v1_chr1_+_180601171 BC041142 AF089744	-146972	+	AK309750 TSC_hg19_v1_chr1_+_180601157	-146981	+	NM_020950 AB046834	134178	+	TSC_hg19_v1_chr1_+_180897572 BC000118	149441	+	BC009944 TSC_hg19_v1_chr1_-_180992009 AK299063 AK312440	243870	-	AF099082|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF115389|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##BC041142|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF089744|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AK309750|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##NM_020950|KIAA1614|57710|KIAA1614##AB046834|KIAA1614|57710|KIAA1614##BC009944|STX6|10228|syntaxin 6##AK299063|STX6|10228|syntaxin 6##AK312440|STX6|10228|syntaxin 6	1.241801	CTCF.p2:-5:0.567	CTCF.p2:-6:0.428	CTCF.p2:67:0.247
chr11	85302029	85302149	reg1021671.p2	5.914	+	U32376 AB209252 AK295094 NM_001364	-667639	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	-667857	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	-1273708	-	CR749820 NM_001142699	36224	-	NM_001193537 NM_001193538 NM_018480 TSC_hg19_v1_chr11_+_85339636 AK298189 BC017574 BC107900 AF220193 AF246240 AK291150 BC038933 BC012065	37557	+	NM_001244735 NM_032273 AL136941 AK312081 BC007875	56914	+	U32376|DLG2|1740|discs, large homolog 2 (Drosophila)##AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##CR749820|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142699|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001193537|TMEM126B|55863|transmembrane protein 126B##NM_001193538|TMEM126B|55863|transmembrane protein 126B##NM_018480|TMEM126B|55863|transmembrane protein 126B##AK298189|TMEM126B|55863|transmembrane protein 126B##BC017574|TMEM126B|55863|transmembrane protein 126B##BC107900|TMEM126B|55863|transmembrane protein 126B##AF220193|TMEM126B|55863|transmembrane protein 126B##AF246240|TMEM126B|55863|transmembrane protein 126B##AK291150|TMEM126B|55863|transmembrane protein 126B##BC038933|TMEM126B|55863|transmembrane protein 126B##BC012065|TMEM126B|55863|transmembrane protein 126B##NM_001244735|TMEM126A|84233|transmembrane protein 126A##NM_032273|TMEM126A|84233|transmembrane protein 126A##AL136941|TMEM126A|84233|transmembrane protein 126A##AK312081|TMEM126A|84233|transmembrane protein 126A##BC007875|TMEM126A|84233|transmembrane protein 126A	0.990607	CTCF.p2:-4:0.991
chr15	79743128	79743263	reg1025478.p2	5.914	+	AB028947 NM_015206 BC152466	-18336	+	TSC_hg19_v1_chr15_+_79603557 AJ132270 CR457384	-139628	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	-139692	+	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	446185	-	NM_001199758	446431	-	AL109714 NM_001100879	464402	-	AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##AJ132270|TMED3|23423|transmembrane emp24 protein transport domain containing 3##CR457384|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL109714|ST20|400410|suppressor of tumorigenicity 20##NM_001100879|ST20|400410|suppressor of tumorigenicity 20	0.930317	CTCF.p2:-37:0.930
chr1	6201780	6201887	reg1024217.p1	5.914	+	AK315858 NM_001199863	-95660	+	AK131252 NM_001199862	-95853	+	AK124696 NM_001199860	-107489	+	AK127046 AB527126 AF425231 NM_015557 TSC_hg19_v1_chr1_-_6240331	38374	-	TSC_hg19_v1_chr1_-_6259655 CR456873 BC046108 BC058887 AK097075 AK311749 D17652 BC066314 BC035566 NM_000983	57820	-	BC119780 TSC_hg19_v1_chr1_+_6266175 NM_207396	64331	+	AK315858|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199863|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK131252|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199862|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK124696|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199860|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK127046|CHD5|26038|chromodomain helicase DNA binding protein 5##AF425231|CHD5|26038|chromodomain helicase DNA binding protein 5##NM_015557|CHD5|26038|chromodomain helicase DNA binding protein 5##CR456873|RPL22|6146|ribosomal protein L22##BC058887|RPL22|6146|ribosomal protein L22##AK097075|RPL22|6146|ribosomal protein L22##AK311749|RPL22|6146|ribosomal protein L22##D17652|RPL22|6146|ribosomal protein L22##BC066314|RPL22|6146|ribosomal protein L22##BC035566|RPL22|6146|ribosomal protein L22##NM_000983|RPL22|6146|ribosomal protein L22##BC119780|RNF207|388591|ring finger protein 207##NM_207396|RNF207|388591|ring finger protein 207	0.845846	CTCF.p2:24:0.810
chr2	71757984	71758092	reg1023836.p1	5.913	+	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-64145	+	NM_001130976 NM_001130977 NM_001130978 NM_001130979 NM_001130980 NM_001130981 NM_003494 AF075575 BC171803 EU515155 EU515156 EU515157 EU515158 EU515159 EU515160	-77237	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	-199141	+	AK295683 TSC_hg19_v1_chr2_-_72371202	613161	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	616904	-	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	1295066	-	DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130976|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130977|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130978|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130979|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130980|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130981|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_003494|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AF075575|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##BC171803|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515155|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515156|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515157|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515158|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515159|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515160|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B	0.958739	CTCF.p2:12:0.959
chr9	99704590	99704715	reg1025625.p1	5.913	+	NM_001045477 NM_001170741	-13367	+	BC137073 AK131468 NM_001001662	-88266	-	AB023189 NM_014930 TSC_hg19_v1_chr9_-_99540352 BC036676 BC068587 BC058022 AK292600	-164299	-	TSC_hg19_v1_chr9_-_99775872 BC005058	71248	-	AF070448 BC023504 Y14734 AB001928 AK310645 AK310740 BC110512 AY358641 NM_001333	96826	-	AK312806 NM_001201575	97272	-	NM_001045477|FAM22G|441457|family with sequence similarity 22, member G##NM_001170741|FAM22G|441457|family with sequence similarity 22, member G##BC137073|ZNF782|158431|zinc finger protein 782##AK131468|ZNF782|158431|zinc finger protein 782##NM_001001662|ZNF782|158431|zinc finger protein 782##AB023189|ZNF510|22869|zinc finger protein 510##NM_014930|ZNF510|22869|zinc finger protein 510##BC036676|ZNF510|22869|zinc finger protein 510##BC068587|ZNF510|22869|zinc finger protein 510##BC058022|ZNF510|22869|zinc finger protein 510##AK292600|ZNF510|22869|zinc finger protein 510##BC005058|HIATL2|84278|hippocampus abundant transcript-like 2##AF070448|CTSL2|1515|cathepsin L2##BC023504|CTSL2|1515|cathepsin L2##Y14734|CTSL2|1515|cathepsin L2##AB001928|CTSL2|1515|cathepsin L2##AK310645|CTSL2|1515|cathepsin L2##AK310740|CTSL2|1515|cathepsin L2##BC110512|CTSL2|1515|cathepsin L2##AY358641|CTSL2|1515|cathepsin L2##NM_001333|CTSL2|1515|cathepsin L2##AK312806|CTSL2|1515|cathepsin L2##NM_001201575|CTSL2|1515|cathepsin L2	0.997653	CTCF.p2:-8:0.998
chrX	129709929	129710085	reg1024886.p2	5.913	+	TSC_hg19_v1_chrX_+_129535955 BC003676 NM_016024 AK292855 BC105582 BC012345 AL050405 BC033750 BC063517 BC010036 BC040433 BC050707	-174054	+	AY288416 BC101166 BC101167 BC101168 AB529244 HQ258187 BC095502 BC126179 BC126181 NM_178471	-190542	-	TSC_hg19_v1_chrX_+_129473927 AK304649 AK297499 AK309433 AK296155 NM_003951 NM_022810 BC119666 BC119667 AF155809 AF155810 AF155811 AY358099	-235975	+	TSC_hg19_v1_chrX_-_130037184 BC108713 AL133207 AK289812 AK289837	327170	-	TSC_hg19_v1_chrX_-_130037207 AK000353 NM_006375 NM_182314	327199	-	AK128203 NM_144967 AK296748 AX721074	482265	+	BC003676|RBMX2|51634|RNA binding motif protein, X-linked 2##NM_016024|RBMX2|51634|RNA binding motif protein, X-linked 2##AK292855|RBMX2|51634|RNA binding motif protein, X-linked 2##BC105582|RBMX2|51634|RNA binding motif protein, X-linked 2##BC012345|RBMX2|51634|RNA binding motif protein, X-linked 2##AL050405|RBMX2|51634|RNA binding motif protein, X-linked 2##BC033750|RBMX2|51634|RNA binding motif protein, X-linked 2##BC063517|RBMX2|51634|RNA binding motif protein, X-linked 2##BC010036|RBMX2|51634|RNA binding motif protein, X-linked 2##BC040433|RBMX2|51634|RNA binding motif protein, X-linked 2##BC050707|RBMX2|51634|RNA binding motif protein, X-linked 2##AY288416|GPR119|139760|G protein-coupled receptor 119##BC101166|GPR119|139760|G protein-coupled receptor 119##BC101167|GPR119|139760|G protein-coupled receptor 119##BC101168|GPR119|139760|G protein-coupled receptor 119##HQ258187|GPR119|139760|G protein-coupled receptor 119##BC095502|GPR119|139760|G protein-coupled receptor 119##BC126179|GPR119|139760|G protein-coupled receptor 119##BC126181|GPR119|139760|G protein-coupled receptor 119##NM_178471|GPR119|139760|G protein-coupled receptor 119##AK297499|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AK309433|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AK296155|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##NM_003951|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##NM_022810|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##BC119666|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##BC119667|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155809|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155810|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155811|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AY358099|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##BC108713|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AL133207|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289812|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289837|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK000353|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_006375|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_182314|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK128203|ARHGAP36|158763|Rho GTPase activating protein 36##NM_144967|ARHGAP36|158763|Rho GTPase activating protein 36##AK296748|ARHGAP36|158763|Rho GTPase activating protein 36	0.0	
chr15	59063406	59063559	reg1025162.p2	5.912	+	TSC_hg19_v1_chr15_+_59063396 AL833610 NM_001040450 NM_001040453	-75	+	TSC_hg19_v1_chr15_-_59041988 BC126253 BC143935 NM_001110	-21428	-	TSC_hg19_v1_chr15_-_59041833 AK300472	-21660	-	BC060514 TSC_hg19_v1_chr15_+_59063500 AK297291 AK075319 AB075509 BC140811 BC144616	40	+	AK000867 TSC_hg19_v1_chr15_-_59225776 AK055195 BC108656 AK291423 AK131242	162300	-	TSC_hg19_v1_chr15_-_59225851 BC140851 NM_001013843 NM_024755	162349	-	AL833610|FAM63B|54629|family with sequence similarity 63, member B##NM_001040450|FAM63B|54629|family with sequence similarity 63, member B##NM_001040453|FAM63B|54629|family with sequence similarity 63, member B##BC126253|ADAM10|102|ADAM metallopeptidase domain 10##BC143935|ADAM10|102|ADAM metallopeptidase domain 10##NM_001110|ADAM10|102|ADAM metallopeptidase domain 10##AK300472|ADAM10|102|ADAM metallopeptidase domain 10##BC060514|FAM63B|54629|family with sequence similarity 63, member B##AK297291|FAM63B|54629|family with sequence similarity 63, member B##AK075319|FAM63B|54629|family with sequence similarity 63, member B##AB075509|FAM63B|54629|family with sequence similarity 63, member B##BC140811|FAM63B|54629|family with sequence similarity 63, member B##BC144616|FAM63B|54629|family with sequence similarity 63, member B##AK000867|SLTM|79811|SAFB-like, transcription modulator##AK055195|SLTM|79811|SAFB-like, transcription modulator##BC108656|SLTM|79811|SAFB-like, transcription modulator##AK291423|SLTM|79811|SAFB-like, transcription modulator##AK131242|SLTM|79811|SAFB-like, transcription modulator##BC140851|SLTM|79811|SAFB-like, transcription modulator##NM_001013843|SLTM|79811|SAFB-like, transcription modulator##NM_024755|SLTM|79811|SAFB-like, transcription modulator	0.0	
chr17	77898316	77898433	reg1021131.p2	5.912	+	BC044939 TSC_hg19_v1_chr17_+_77893233	-5175	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	-85232	-	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-127467	-	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	111228	-	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	112074	+	TSC_hg19_v1_chr17_+_78075349 NM_000152 NM_001079803 NM_001079804	176952	+	AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40##NM_000152|GAA|2548|glucosidase, alpha; acid##NM_001079803|GAA|2548|glucosidase, alpha; acid##NM_001079804|GAA|2548|glucosidase, alpha; acid	0.86811	CTCF.p2:-6:0.868
chr19	2110917	2111081	reg1025419.p1	5.912	+	TSC_hg19_v1_chr19_+_2096982 CU677067 DQ424900 AK294083	-14036	+	TSC_hg19_v1_chr19_+_2096913 AY358444 NM_001031735 NM_001039846 DQ196309 DQ196310 AK301957 AY753639 BC014609 BC040964 BC010443	-14139	+	TSC_hg19_v1_chr19_-_2096297 AL832474	-14705	-	CU679595 AB384738 BC005142 TSC_hg19_v1_chr19_-_2151519	40426	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	40543	-	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	40554	-	DQ424900|IZUMO4|113177|IZUMO family member 4##AK294083|IZUMO4|113177|IZUMO family member 4##AY358444|IZUMO4|113177|IZUMO family member 4##NM_001031735|IZUMO4|113177|IZUMO family member 4##NM_001039846|IZUMO4|113177|IZUMO family member 4##DQ196309|IZUMO4|113177|IZUMO family member 4##DQ196310|IZUMO4|113177|IZUMO family member 4##AK301957|IZUMO4|113177|IZUMO family member 4##AY753639|IZUMO4|113177|IZUMO family member 4##BC014609|IZUMO4|113177|IZUMO family member 4##BC040964|IZUMO4|113177|IZUMO family member 4##BC010443|IZUMO4|113177|IZUMO family member 4##AL832474|MOB3A|126308|MOB kinase activator 3A##BC005142|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit	0.103551	
chr8	93830686	93830792	reg1022851.p1	5.912	+	NM_001198633 NM_175634 TSC_hg19_v1_chr8_-_93115455	-715284	-	NM_001198628	-718824	-	NM_001198625 NM_001198626 NM_001198627 NM_001198631 NM_001198634 NM_001198679	-722858	-	AK096398 NM_001191036	147026	-	NM_001191035 TSC_hg19_v1_chr8_-_93978373 BC031029 AK097956 BC110326 DQ351291 NM_001171795 NM_001171796 NM_001171797 NM_001171798 NM_001171799	147583	-	BC089453 NM_001242668	348339	-	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##AK096398|C8orf83|286144|chromosome 8 open reading frame 83##NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83##NM_001191035|C8orf83|286144|chromosome 8 open reading frame 83##BC031029|C8orf83|286144|chromosome 8 open reading frame 83##AK097956|C8orf83|286144|chromosome 8 open reading frame 83##BC110326|C8orf83|286144|chromosome 8 open reading frame 83##DQ351291|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171795|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171796|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171797|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171798|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171799|C8orf83|286144|chromosome 8 open reading frame 83##BC089453|LOC389676|389676|uncharacterized LOC389676##NM_001242668|LOC389676|389676|uncharacterized LOC389676	0.0	
chr1	32575039	32575179	reg1023108.p1	5.911	+	TSC_hg19_v1_chr1_+_32573647 NM_012316 AB621806 AK002111 AK315490 AK128609 BC020520 AF060543	-1462	+	AL136695 TSC_hg19_v1_chr1_+_32538539 AK001177 BC004364 AK296653 AK298766 AK300293	-36535	+	TSC_hg19_v1_chr1_+_32538502 AK023331 NM_018056	-36605	+	TSC_hg19_v1_chr1_+_32645315 AL832636 AL832338	70178	+	TSC_hg19_v1_chr1_+_32645343 AK096939 NM_175852	70232	+	TSC_hg19_v1_chr1_+_32645661 AL832637	70547	+	NM_012316|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AK002111|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AK315490|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AK128609|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##BC020520|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AF060543|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AL136695|TMEM39B|55116|transmembrane protein 39B##AK001177|TMEM39B|55116|transmembrane protein 39B##BC004364|TMEM39B|55116|transmembrane protein 39B##AK296653|TMEM39B|55116|transmembrane protein 39B##AK298766|TMEM39B|55116|transmembrane protein 39B##AK300293|TMEM39B|55116|transmembrane protein 39B##AK023331|TMEM39B|55116|transmembrane protein 39B##NM_018056|TMEM39B|55116|transmembrane protein 39B##AL832636|TXLNA|200081|taxilin alpha##AL832338|TXLNA|200081|taxilin alpha##AK096939|TXLNA|200081|taxilin alpha##NM_175852|TXLNA|200081|taxilin alpha##AL832637|TXLNA|200081|taxilin alpha	0.076337	
chr15	49258326	49258435	reg1023449.p1	5.911	+	BC033907 NM_203349	-2740	-	TSC_hg19_v1_chr15_+_49170330 NM_014335 BC114944 BC114946 AK315365 AF092135 AF109873 AF349444 AK098383 AL109701 BC024151 AL357456 BC007944 AB527924 AF274951	-88008	+	BC117182 TSC_hg19_v1_chr15_-_49103277 AB020719 BC069186 AK303805 BX648822 BC107721 NM_001194998 NM_014985	-155118	-	CU689588 AB385300 TSC_hg19_v1_chr15_-_49338644 D87445 AK307480 AK308183 BC008635 BC033001 NM_001193489 NM_014701	80256	-	AF120268 L40388 TSC_hg19_v1_chr15_-_49447811 AB462991 CR542063 CU680378 EU446744 EU831466 EU831553 AK222590 AB209799 AF100762 AF212227 AF084260 BC012629 AK312643 AK295598 NM_001143887 NM_004236	189429	-	TSC_hg19_v1_chr15_+_49447990 AF461816 AL832745 NM_001001556	189611	+	BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_014335|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114946|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK315365|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF092135|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF109873|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF349444|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK098383|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL109701|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC024151|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL357456|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC007944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC117182|CEP152|22995|centrosomal protein 152kDa##AB020719|CEP152|22995|centrosomal protein 152kDa##BC069186|CEP152|22995|centrosomal protein 152kDa##AK303805|CEP152|22995|centrosomal protein 152kDa##BX648822|CEP152|22995|centrosomal protein 152kDa##BC107721|CEP152|22995|centrosomal protein 152kDa##NM_001194998|CEP152|22995|centrosomal protein 152kDa##NM_014985|CEP152|22995|centrosomal protein 152kDa##D87445|SECISBP2L|9728|SECIS binding protein 2-like##AK307480|SECISBP2L|9728|SECIS binding protein 2-like##AK308183|SECISBP2L|9728|SECIS binding protein 2-like##BC008635|SECISBP2L|9728|SECIS binding protein 2-like##BC033001|SECISBP2L|9728|SECIS binding protein 2-like##NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like##NM_014701|SECISBP2L|9728|SECIS binding protein 2-like##AF120268|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##L40388|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##CR542063|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU446744|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831466|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831553|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK222590|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AB209799|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF100762|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF212227|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF084260|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##BC012629|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK312643|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK295598|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_001143887|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_004236|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF461816|GALK2|2585|galactokinase 2##AL832745|GALK2|2585|galactokinase 2##NM_001001556|GALK2|2585|galactokinase 2	0.0	
chr2	97011229	97011366	reg1028358.p1	5.911	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-9761	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-9821	+	NM_178495 NM_001163524 BC034503	-19349	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	191188	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	292722	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	292770	-	BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_178495|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163524|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC034503|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.0	
chr3	192140891	192141036	reg1025705.p1	5.911	+	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-14120	-	AY858112 NM_001083308	-962012	+	AK090630 AX746546 NM_198152	-1092639	-	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	304402	-	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	494673	-	BC036194 BC045582 NM_178496	494978	-	AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing##AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2	0.0	
chr3	2806827	2806929	reg1022138.p1	5.911	+	AK095729 TSC_hg19_v1_chr3_+_2553286	-253598	+	NM_001206955	-526366	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	-666317	+	NM_001206956 NM_175613 AK057278 AK314396 BC026119	127031	+	AK304256 NM_000564 NM_001243099 NM_175724 NM_175725 NM_175726 NM_175727 NM_175728	345179	-	NM_182916 TSC_hg19_v1_chr3_+_3168634 AK290411 BC005184 AL834397 BC012537 AB063105 AF151805 AK124137	361773	+	AK095729|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4##AK304256|IL5RA|3568|interleukin 5 receptor, alpha##NM_000564|IL5RA|3568|interleukin 5 receptor, alpha##NM_001243099|IL5RA|3568|interleukin 5 receptor, alpha##NM_175724|IL5RA|3568|interleukin 5 receptor, alpha##NM_175725|IL5RA|3568|interleukin 5 receptor, alpha##NM_175726|IL5RA|3568|interleukin 5 receptor, alpha##NM_175727|IL5RA|3568|interleukin 5 receptor, alpha##NM_175728|IL5RA|3568|interleukin 5 receptor, alpha##NM_182916|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AK290411|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC005184|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AL834397|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC012537|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AB063105|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AF151805|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1	0.780324	CTCF.p2:0:0.780
chr4	95225662	95225804	reg1025013.p2	5.910	+	TSC_hg19_v1_chr4_+_95129015 NM_001128429 NM_020159 BC045534 AY008271 BC041800	-96619	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	-96922	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	-475672	+	TSC_hg19_v1_chr4_-_95263988 BC020734 AK290075 NM_014485	38273	-	TSC_hg19_v1_chr4_+_95373030 AY345240 NM_001011513 NM_001011515 NM_001011516 NM_006457	147289	+	TSC_hg19_v1_chr4_+_95373092 BC017902 BC008741 AK291898 AK291624 AK304125 AK296980 AL832157 AL832686 AF061258 AL833151 AL833438	147363	+	NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase##AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase##NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase##AY345240|PDLIM5|10611|PDZ and LIM domain 5##NM_001011513|PDLIM5|10611|PDZ and LIM domain 5##NM_001011515|PDLIM5|10611|PDZ and LIM domain 5##NM_001011516|PDLIM5|10611|PDZ and LIM domain 5##NM_006457|PDLIM5|10611|PDZ and LIM domain 5##BC017902|PDLIM5|10611|PDZ and LIM domain 5##BC008741|PDLIM5|10611|PDZ and LIM domain 5##AK291898|PDLIM5|10611|PDZ and LIM domain 5##AK291624|PDLIM5|10611|PDZ and LIM domain 5##AK304125|PDLIM5|10611|PDZ and LIM domain 5##AK296980|PDLIM5|10611|PDZ and LIM domain 5##AL832157|PDLIM5|10611|PDZ and LIM domain 5##AL832686|PDLIM5|10611|PDZ and LIM domain 5##AF061258|PDLIM5|10611|PDZ and LIM domain 5##AL833151|PDLIM5|10611|PDZ and LIM domain 5##AL833438|PDLIM5|10611|PDZ and LIM domain 5	0.999535	CTCF.p2:-16:1.000
chr1	212965122	212965296	reg1024444.p2	5.909	+	AB528354 CU675531 DQ892899 DQ896149 AK222996 AF201941 TSC_hg19_v1_chr1_-_212965111 BC007067 AK223260 AK303250 BC036048 AF255793 AK313730 NM_001042549 NM_015471	-88	-	TSC_hg19_v1_chr1_-_212873317 AF255346 NM_018664	-91889	-	TSC_hg19_v1_chr1_-_212873221 BC117489 BC117491	-91979	-	AK293129 NM_001042552 NM_001042553 NM_001146169 NM_001146170 NM_001146171 AK304557 TSC_hg19_v1_chr1_+_212965255 BC113638 BC117485 BC143956 BC143957 AL832248 BC048115 HQ258161	9	+	AY640234 BC035742 NM_001024601	55759	-	TSC_hg19_v1_chr1_-_213031441 AY030238 AY030239 AK092887	66255	-	DQ892899|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##DQ896149|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK222996|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF201941|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC007067|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK223260|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK303250|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC036048|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF255793|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK313730|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001042549|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_015471|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF255346|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##NM_018664|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117489|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117491|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##AK293129|TATDN3|128387|TatD DNase domain containing 3##NM_001042552|TATDN3|128387|TatD DNase domain containing 3##NM_001042553|TATDN3|128387|TatD DNase domain containing 3##NM_001146169|TATDN3|128387|TatD DNase domain containing 3##NM_001146170|TATDN3|128387|TatD DNase domain containing 3##NM_001146171|TATDN3|128387|TatD DNase domain containing 3##AK304557|TATDN3|128387|TatD DNase domain containing 3##BC113638|TATDN3|128387|TatD DNase domain containing 3##BC117485|TATDN3|128387|TatD DNase domain containing 3##BC143956|TATDN3|128387|TatD DNase domain containing 3##BC143957|TATDN3|128387|TatD DNase domain containing 3##AL832248|TATDN3|128387|TatD DNase domain containing 3##BC048115|TATDN3|128387|TatD DNase domain containing 3##HQ258161|TATDN3|128387|TatD DNase domain containing 3##AY640234|C1orf227|149643|chromosome 1 open reading frame 227##BC035742|C1orf227|149643|chromosome 1 open reading frame 227##NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227##AY030238|FLVCR1-AS1|642946|FLVCR1 antisense RNA 1 (non-protein coding)##AY030239|FLVCR1-AS1|642946|FLVCR1 antisense RNA 1 (non-protein coding)	0.0	
chr15	51166166	51166287	reg1024919.p2	5.909	+	TSC_hg19_v1_chr15_-_51057895 AK075454 AY169314 NM_032802	-108323	-	TSC_hg19_v1_chr15_-_51057864 BC025740 AK315651 AJ345028	-108367	-	TSC_hg19_v1_chr15_-_50978995 AY032950 NM_017672	-187229	-	TSC_hg19_v1_chr15_-_51200797 AK091906	34535	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	34701	+	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	220624	-	AK075454|SPPL2A|84888|signal peptide peptidase-like 2A##AY169314|SPPL2A|84888|signal peptide peptidase-like 2A##NM_032802|SPPL2A|84888|signal peptide peptidase-like 2A##BC025740|SPPL2A|84888|signal peptide peptidase-like 2A##AK315651|SPPL2A|84888|signal peptide peptidase-like 2A##AJ345028|SPPL2A|84888|signal peptide peptidase-like 2A##AY032950|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7##NM_017672|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3	0.0	
chr15	51594904	51594970	reg1028378.p2	5.909	+	AY517501 NM_207381	-197465	-	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	-208087	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	-394010	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	35827	-	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	38857	+	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	320036	-	AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2	0.0	
chr2	178637313	178637493	reg1025841.p2	5.908	+	AK292395 BC042848 NM_152275	-153718	-	TSC_hg19_v1_chr2_-_178483463 CU692122 AK057530 AK125104 BC048006	-153975	-	TSC_hg19_v1_chr2_-_178417525 AK296828 AK055552 BC033795 NM_152517	-219918	-	AJ251509 NM_001077196	116061	-	AF281865 NM_001077358	150139	-	BC112393 BC114431 AB036704 NM_016953 TSC_hg19_v1_chr2_-_178937505 AK309155	300105	-	AK292395|TTC30A|92104|tetratricopeptide repeat domain 30A##BC042848|TTC30A|92104|tetratricopeptide repeat domain 30A##NM_152275|TTC30A|92104|tetratricopeptide repeat domain 30A##AK057530|TTC30A|92104|tetratricopeptide repeat domain 30A##AK125104|TTC30A|92104|tetratricopeptide repeat domain 30A##BC048006|TTC30A|92104|tetratricopeptide repeat domain 30A##AK296828|TTC30B|150737|tetratricopeptide repeat domain 30B##AK055552|TTC30B|150737|tetratricopeptide repeat domain 30B##BC033795|TTC30B|150737|tetratricopeptide repeat domain 30B##NM_152517|TTC30B|150737|tetratricopeptide repeat domain 30B##AJ251509|PDE11A|50940|phosphodiesterase 11A##NM_001077196|PDE11A|50940|phosphodiesterase 11A##AF281865|PDE11A|50940|phosphodiesterase 11A##NM_001077358|PDE11A|50940|phosphodiesterase 11A##BC112393|PDE11A|50940|phosphodiesterase 11A##BC114431|PDE11A|50940|phosphodiesterase 11A##AB036704|PDE11A|50940|phosphodiesterase 11A##NM_016953|PDE11A|50940|phosphodiesterase 11A	0.903332	CTCF.p2:-13:0.887
chr3	183310110	183310251	reg1024010.p2	5.908	+	AF441792 CU689348 DQ894788 EU176275 TSC_hg19_v1_chr3_-_183273495 AK097125 AK314473 BX648370 BC032348 NM_130446	-36728	-	TSC_hg19_v1_chr3_+_183165436 AK057000	-144750	+	NM_015078 BC064632 AK124500 AK310962	-164241	-	BC142993 TSC_hg19_v1_chr3_+_183353410 AK026326 AY422472 BX648466 BX648812 NM_017644	43220	+	TSC_hg19_v1_chr3_+_183415597 AB033023 BC150273 NM_018023	105442	+	TSC_hg19_v1_chr3_-_183543366 BC006434 AK022810 NM_024871	233189	-	AF441792|KLHL6|89857|kelch-like 6 (Drosophila)##DQ894788|KLHL6|89857|kelch-like 6 (Drosophila)##EU176275|KLHL6|89857|kelch-like 6 (Drosophila)##AK097125|KLHL6|89857|kelch-like 6 (Drosophila)##AK314473|KLHL6|89857|kelch-like 6 (Drosophila)##BX648370|KLHL6|89857|kelch-like 6 (Drosophila)##BC032348|KLHL6|89857|kelch-like 6 (Drosophila)##NM_130446|KLHL6|89857|kelch-like 6 (Drosophila)##AK057000|LOC100505687|100505687|uncharacterized LOC100505687##NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC142993|KLHL24|54800|kelch-like 24 (Drosophila)##AK026326|KLHL24|54800|kelch-like 24 (Drosophila)##AY422472|KLHL24|54800|kelch-like 24 (Drosophila)##BX648466|KLHL24|54800|kelch-like 24 (Drosophila)##BX648812|KLHL24|54800|kelch-like 24 (Drosophila)##NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)##AB033023|YEATS2|55689|YEATS domain containing 2##BC150273|YEATS2|55689|YEATS domain containing 2##NM_018023|YEATS2|55689|YEATS domain containing 2##BC006434|MAP6D1|79929|MAP6 domain containing 1##AK022810|MAP6D1|79929|MAP6 domain containing 1##NM_024871|MAP6D1|79929|MAP6 domain containing 1	0.833651	CTCF.p2:30:0.834
chr7	148553492	148553611	reg1022640.p1	5.907	+	TSC_hg19_v1_chr7_+_148396016 BC125119 BC125120	-157508	+	TSC_hg19_v1_chr7_+_148396012 BX537409	-157547	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	-157611	+	AK302216 NM_001203249 TSC_hg19_v1_chr7_-_148580620	27062	-	X95653 TSC_hg19_v1_chr7_-_148581340 U61145 AK092676 AX747667	27776	-	TSC_hg19_v1_chr7_-_148581364 BC010858 AB208895	27816	-	BC125119|CUL1|8454|cullin 1##BC125120|CUL1|8454|cullin 1##BX537409|CUL1|8454|cullin 1##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1##AK302216|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_001203249|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##X95653|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##U61145|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK092676|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##BC010858|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AB208895|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)	0.0	
chr9	37565979	37566115	reg1022948.p3	5.907	+	TSC_hg19_v1_chr9_+_37485944 BC014331 AK023452 AK302345 AK303167 NM_022490 AK301347 AK024032 AK225050 BC017766 BC001337 CR457313 AK091294 AX746899	-80017	+	TSC_hg19_v1_chr9_-_37465448 AK292404	-100606	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	-100652	-	AF174598 AF176705 NM_012166 TSC_hg19_v1_chr9_-_37576280	10218	-	CR627326 AB435233 TSC_hg19_v1_chr9_-_37592574 BC034247	26472	-	TSC_hg19_v1_chr9_-_37592575 BC029423 NM_001001790 NM_001134484 NM_001134485	26558	-	BC014331|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK023452|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK302345|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK303167|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##NM_022490|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK301347|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK024032|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK225050|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC017766|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC001337|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##CR457313|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK091294|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5##AF174598|FBXO10|26267|F-box protein 10##AF176705|FBXO10|26267|F-box protein 10##NM_012166|FBXO10|26267|F-box protein 10##AB435233|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC034247|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC029423|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001001790|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134484|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134485|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)	0.0	
chrX	13276368	13276537	reg1023706.p2	5.907	+	BX647580 AK313776 AF494345 BX648111 BX648919 NM_174901	-213634	-	TSC_hg19_v1_chrX_+_12994293 BC104464 BC104465 BT007090 X02493	-282109	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	-283212	+	AB050195 TSC_hg19_v1_chrX_-_13338140 BC137186 BC137187	61686	-	AK302365 NM_001135995	62065	-	TSC_hg19_v1_chrX_-_13397507 D28370	121053	-	BX647580|FAM9C|171484|family with sequence similarity 9, member C##AK313776|FAM9C|171484|family with sequence similarity 9, member C##AF494345|FAM9C|171484|family with sequence similarity 9, member C##BX648111|FAM9C|171484|family with sequence similarity 9, member C##BX648919|FAM9C|171484|family with sequence similarity 9, member C##NM_174901|FAM9C|171484|family with sequence similarity 9, member C##BC104464|TMSB4X|7114|thymosin beta 4, X-linked##BC104465|TMSB4X|7114|thymosin beta 4, X-linked##BT007090|TMSB4X|7114|thymosin beta 4, X-linked##X02493|TMSB4X|7114|thymosin beta 4, X-linked##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked##AB050195|ATXN3L|92552|ataxin 3-like##BC137186|ATXN3L|92552|ataxin 3-like##BC137187|ATXN3L|92552|ataxin 3-like##AK302365|ATXN3L|92552|ataxin 3-like##NM_001135995|ATXN3L|92552|ataxin 3-like	0.740423	CTCF.p2:-21:0.740
chr1	155682549	155682696	reg1022748.p1	5.906	+	TSC_hg19_v1_chr1_+_155658903 X83544	-23712	+	AK225869 AK302281 NM_001199849 NM_001199850 NM_001199851 TSC_hg19_v1_chr1_+_155658881 AK293117 BC107487 BC107488 NM_004632 NM_033657	-23736	+	AK298201 CR749790 U18321 TSC_hg19_v1_chr1_+_155658873	-23746	+	TSC_hg19_v1_chr1_-_155774769 AK315191 BC071650	92169	-	TSC_hg19_v1_chr1_-_155827003 AB232668 AY335492 BC114629 BC115703 BX537764 NM_001037533 NM_032292 AY335490 BX648043 AK098734 BX648802	144354	-	TSC_hg19_v1_chr1_-_155827021 AB195687 AB195688	144430	-	X83544|DAP3|7818|death associated protein 3##AK225869|DAP3|7818|death associated protein 3##AK302281|DAP3|7818|death associated protein 3##NM_001199849|DAP3|7818|death associated protein 3##NM_001199850|DAP3|7818|death associated protein 3##NM_001199851|DAP3|7818|death associated protein 3##AK293117|DAP3|7818|death associated protein 3##BC107487|DAP3|7818|death associated protein 3##BC107488|DAP3|7818|death associated protein 3##NM_004632|DAP3|7818|death associated protein 3##NM_033657|DAP3|7818|death associated protein 3##AK298201|DAP3|7818|death associated protein 3##CR749790|DAP3|7818|death associated protein 3##U18321|DAP3|7818|death associated protein 3##AK315191|GON4L|54856|gon-4-like (C. elegans)##BC071650|GON4L|54856|gon-4-like (C. elegans)##AB232668|GON4L|54856|gon-4-like (C. elegans)##AY335492|GON4L|54856|gon-4-like (C. elegans)##BC114629|GON4L|54856|gon-4-like (C. elegans)##BC115703|GON4L|54856|gon-4-like (C. elegans)##BX537764|GON4L|54856|gon-4-like (C. elegans)##NM_001037533|GON4L|54856|gon-4-like (C. elegans)##NM_032292|GON4L|54856|gon-4-like (C. elegans)##AY335490|GON4L|54856|gon-4-like (C. elegans)##BX648043|GON4L|54856|gon-4-like (C. elegans)##AK098734|GON4L|54856|gon-4-like (C. elegans)##BX648802|GON4L|54856|gon-4-like (C. elegans)##AB195687|GON4L|54856|gon-4-like (C. elegans)##AB195688|GON4L|54856|gon-4-like (C. elegans)	0.017938	
chr1	218503520	218503645	reg1022483.p1	5.906	+	AK290066 BC003668 TSC_hg19_v1_chr1_+_218458652 BC020641 AF151873	-44913	+	NM_016052 TSC_hg19_v1_chr1_+_218458635	-44950	+	AY963797 AK310291 AK098591 BC014608 NM_138796 TSC_hg19_v1_chr1_+_217804714 EU832110 EU832204	-698889	+	NM_001135599 NM_003238 TSC_hg19_v1_chr1_+_218518677 AB209842	15129	+	M19154 TSC_hg19_v1_chr1_+_218519634	16023	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	843576	+	AK290066|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC003668|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC020641|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AF151873|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##NM_016052|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AY963797|SPATA17|128153|spermatogenesis associated 17##AK310291|SPATA17|128153|spermatogenesis associated 17##AK098591|SPATA17|128153|spermatogenesis associated 17##BC014608|SPATA17|128153|spermatogenesis associated 17##NM_138796|SPATA17|128153|spermatogenesis associated 17##EU832110|SPATA17|128153|spermatogenesis associated 17##EU832204|SPATA17|128153|spermatogenesis associated 17##NM_001135599|TGFB2|7042|transforming growth factor, beta 2##NM_003238|TGFB2|7042|transforming growth factor, beta 2##AB209842|TGFB2|7042|transforming growth factor, beta 2##M19154|TGFB2|7042|transforming growth factor, beta 2##NM_138794|LYPLAL1|127018|lysophospholipase-like 1	0.937863	CTCF.p2:-8:0.938
chr15	51829299	51829416	reg1025921.p1	5.906	+	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	-195563	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	-198593	-	AY517501 NM_207381	-431885	-	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	85616	-	AF453583 NM_001165257 NM_013243 AF078851 TSC_hg19_v1_chr15_+_51973699 AY359093 AK075314 AK296466 AK290175	144274	+	AK129759 DQ892424 DQ895638 TSC_hg19_v1_chr15_-_52029856	200519	-	NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2##AF453583|SCG3|29106|secretogranin III##NM_001165257|SCG3|29106|secretogranin III##NM_013243|SCG3|29106|secretogranin III##AF078851|SCG3|29106|secretogranin III##AY359093|SCG3|29106|secretogranin III##AK075314|SCG3|29106|secretogranin III##AK296466|SCG3|29106|secretogranin III##AK290175|SCG3|29106|secretogranin III##AK129759|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ892424|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ895638|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	0.697627	CTCF.p2:10:0.698
chr2	85097593	85097704	reg1024227.p1	5.906	+	TSC_hg19_v1_chr2_+_84743576 AK094676 NM_001370	-354071	+	NM_003849	-411063	-	AK296741 TSC_hg19_v1_chr2_-_84686396	-411253	-	TSC_hg19_v1_chr2_-_85108209 AK296608 AK309615	10559	-	TSC_hg19_v1_chr2_-_85108241 NM_001080824 BC051789	10655	-	NM_021103 AK130949 D28363 TSC_hg19_v1_chr2_+_85132779 AK311952 BC016731 BC107889 S54005 BC016025 M20259 AY453400	35147	+	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296608|C2orf89|129293|chromosome 2 open reading frame 89##AK309615|C2orf89|129293|chromosome 2 open reading frame 89##NM_001080824|C2orf89|129293|chromosome 2 open reading frame 89##BC051789|C2orf89|129293|chromosome 2 open reading frame 89##NM_021103|TMSB10|9168|thymosin beta 10##AK130949|TMSB10|9168|thymosin beta 10##AK311952|TMSB10|9168|thymosin beta 10##BC016731|TMSB10|9168|thymosin beta 10##BC107889|TMSB10|9168|thymosin beta 10##S54005|TMSB10|9168|thymosin beta 10##BC016025|TMSB10|9168|thymosin beta 10##M20259|TMSB10|9168|thymosin beta 10##AY453400|TMSB10|9168|thymosin beta 10	0.248124	CTCF.p2:-9:0.248
chrX	148609400	148609529	reg1024692.p2	5.906	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	-22690	-	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-808852	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-1027276	+	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	12966	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	13130	+	AK300334 NM_001171909	16601	+	AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A##AK300334|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171909|CXorf40A|91966|chromosome X open reading frame 40A	0.0	
chr19	13944352	13944532	reg1014505.p1	5.905	+	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-38197	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-59158	+	TSC_hg19_v1_chr19_+_13885269 NM_014047	-59177	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	2660	-	BC101209 BC101210 NM_001098622	43620	+	AK097431 NM_024323	72466	-	AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##NM_014047|C19orf53|28974|chromosome 19 open reading frame 53##AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57	0.302735	CTCF.p2:53:0.303
chr2	243153805	243153936	reg1021409.p1	5.905	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	-123011	+	AK090909 AX746675 BC113517 BC113519 NM_173821	-341988	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	-352846	-	None	None	None	None	None	None	None	None	None	AK298283|LOC728323|728323|uncharacterized LOC728323##AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1	1.741666	CTCF.p2:-22:0.999	CTCF.p2:-80:0.662
chr3	87217136	87217282	reg1023626.p1	5.905	+	BC094780 TSC_hg19_v1_chr3_-_87040272	-176939	-	TSC_hg19_v1_chr3_-_87040249 NM_016206	-176958	-	AF538973 NM_153184	-1441578	+	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	59326	+	AB587506 L18781 X72215 X62429 D10216 NM_000306 NM_001122757	108464	-	NM_000866	814516	+	BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B##L18781|POU1F1|5449|POU class 1 homeobox 1##X72215|POU1F1|5449|POU class 1 homeobox 1##X62429|POU1F1|5449|POU class 1 homeobox 1##D10216|POU1F1|5449|POU class 1 homeobox 1##NM_000306|POU1F1|5449|POU class 1 homeobox 1##NM_001122757|POU1F1|5449|POU class 1 homeobox 1##NM_000866|HTR1F|3355|5-hydroxytryptamine (serotonin) receptor 1F	0.995231	CTCF.p2:6:0.995
chr4	110899183	110899300	reg1024338.p1	5.905	+	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-65194	+	AK126648 NM_198506	-126756	+	NM_006583 BC128120 BC128121 BC128401	-150088	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	220544	-	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	498132	+	AK313987 TSC_hg19_v1_chr4_-_111543909	644669	-	AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK126648|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_198506|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_006583|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128120|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128121|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC128401|RRH|10692|retinal pigment epithelium-derived rhodopsin homolog##BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313987|PITX2|5308|paired-like homeodomain 2	0.99633	CTCF.p2:10:0.996
chr1	204096906	204097004	reg1022439.p2	5.904	+	TSC_hg19_v1_chr1_+_204042242 BC106038 AK304801 BC040649 NM_005686	-54694	+	TSC_hg19_v1_chr1_+_203830776 BC072433 AB464220 M15919	-266164	+	TSC_hg19_v1_chr1_+_203830735 AK312130 BC090951 NM_003094 M37716 X12466 BC002639 S60260	-266210	+	AB073608 AK302145 CU679603 AK293426 AK001623 TSC_hg19_v1_chr1_-_204121116 BC010082	24064	-	TSC_hg19_v1_chr1_-_204121144 NM_018208	24270	-	CR536498 AB464139 CU690486 BC033474 BC047752 NM_000537	38487	-	BC106038|SOX13|9580|SRY (sex determining region Y)-box 13##AK304801|SOX13|9580|SRY (sex determining region Y)-box 13##BC040649|SOX13|9580|SRY (sex determining region Y)-box 13##NM_005686|SOX13|9580|SRY (sex determining region Y)-box 13##BC072433|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##M15919|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##AK312130|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##BC090951|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##NM_003094|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##M37716|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##X12466|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##BC002639|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##AB073608|ETNK2|55224|ethanolamine kinase 2##AK302145|ETNK2|55224|ethanolamine kinase 2##AK293426|ETNK2|55224|ethanolamine kinase 2##AK001623|ETNK2|55224|ethanolamine kinase 2##BC010082|ETNK2|55224|ethanolamine kinase 2##NM_018208|ETNK2|55224|ethanolamine kinase 2##CR536498|REN|5972|renin##BC033474|REN|5972|renin##BC047752|REN|5972|renin##NM_000537|REN|5972|renin	0.93617	CTCF.p2:1:0.936
chr2	97268415	97268542	reg1022810.p1	5.904	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	-65993	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-266942	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-267002	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	35541	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	35589	-	TSC_hg19_v1_chr2_-_97304084 AK023813 AY050169 AK304011 NM_001115016 NM_017991	35620	-	NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK023813|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AY050169|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK304011|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##NM_001115016|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##NM_017991|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.779808	CTCF.p2:-4:0.780
chr3	46599684	46599865	reg1001451.p1	5.904	+	AJ312776 NM_031440 BC131756 AY562237	-60256	+	M83205 X52941 AF332168 AY137470 AY178998 AY875691 DQ522304 EU779935 AB527812 AY360320 DQ892855 DQ896102 M83202 M93150 AY165046 AK290859 AK292813 AK303889 BC015822 BC022347 BC015823 AY493417 NM_002343 X53961	-93277	-	AK316330 U84119 AK298035 NM_001199149	-94656	-	NM_024512	8265	-	NM_001174136	16270	+	NM_003212 X14253 BC022393 BC067844 AK313319 AB590665 CU688358 CU692602 EU832709	19493	+	AJ312776|RTP3|83597|receptor (chemosensory) transporter protein 3##NM_031440|RTP3|83597|receptor (chemosensory) transporter protein 3##BC131756|RTP3|83597|receptor (chemosensory) transporter protein 3##AY562237|RTP3|83597|receptor (chemosensory) transporter protein 3##M83205|LTF|4057|lactotransferrin##X52941|LTF|4057|lactotransferrin##AF332168|LTF|4057|lactotransferrin##AY137470|LTF|4057|lactotransferrin##AY178998|LTF|4057|lactotransferrin##AY875691|LTF|4057|lactotransferrin##DQ522304|LTF|4057|lactotransferrin##EU779935|LTF|4057|lactotransferrin##AY360320|LTF|4057|lactotransferrin##DQ892855|LTF|4057|lactotransferrin##DQ896102|LTF|4057|lactotransferrin##M83202|LTF|4057|lactotransferrin##M93150|LTF|4057|lactotransferrin##AY165046|LTF|4057|lactotransferrin##AK290859|LTF|4057|lactotransferrin##AK292813|LTF|4057|lactotransferrin##AK303889|LTF|4057|lactotransferrin##BC015822|LTF|4057|lactotransferrin##BC022347|LTF|4057|lactotransferrin##BC015823|LTF|4057|lactotransferrin##AY493417|LTF|4057|lactotransferrin##NM_002343|LTF|4057|lactotransferrin##X53961|LTF|4057|lactotransferrin##AK316330|LTF|4057|lactotransferrin##U84119|LTF|4057|lactotransferrin##AK298035|LTF|4057|lactotransferrin##NM_001199149|LTF|4057|lactotransferrin##NM_024512|LRRC2|79442|leucine rich repeat containing 2##NM_001174136|TDGF1|6997|teratocarcinoma-derived growth factor 1##NM_003212|TDGF1|6997|teratocarcinoma-derived growth factor 1##X14253|TDGF1|6997|teratocarcinoma-derived growth factor 1##BC022393|TDGF1|6997|teratocarcinoma-derived growth factor 1##BC067844|TDGF1|6997|teratocarcinoma-derived growth factor 1##AK313319|TDGF1|6997|teratocarcinoma-derived growth factor 1##EU832709|TDGF1|6997|teratocarcinoma-derived growth factor 1	0.187367	
chr10	79789359	79789505	reg1020633.p1	5.903	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-118	-	AF021351 AY091459 AB384941 TSC_hg19_v1_chr10_-_79789272 BC041089 AK300329	-211	-	AB384502 NM_004747 AB011155 BC146794 TSC_hg19_v1_chr10_-_79686514	-103030	-	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	4124	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	4199	+	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	1039356	+	NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AF021351|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AY091459|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC041089|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AK300329|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##NM_004747|DLG5|9231|discs, large homolog 5 (Drosophila)##AB011155|DLG5|9231|discs, large homolog 5 (Drosophila)##BC146794|DLG5|9231|discs, large homolog 5 (Drosophila)##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.692991	CTCF.p2:-22:0.645
chr19	42391925	42392058	reg1024342.p2	5.903	+	NM_199002 TSC_hg19_v1_chr19_+_42388510 BC034013 BC067262	-3505	+	TSC_hg19_v1_chr19_+_42387309 U64105	-4673	+	BC064996 TSC_hg19_v1_chr19_+_42387266 NM_004706 NM_198977 BC011726	-4714	+	AF112996 BT019964 CR457214 CR542116 AB590878 AF112202 AJ133534 BC008950 TSC_hg19_v1_chr19_-_42463499	71477	-	TSC_hg19_v1_chr19_-_42463500 NM_006423	71529	-	AK295833 TSC_hg19_v1_chr19_-_42498254	106246	-	NM_199002|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC034013|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC067262|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##U64105|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC064996|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_004706|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_198977|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC011726|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)##BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)##CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)##CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)##AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)##AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)##BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)##NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)##AK295833|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide	0.779439	CTCF.p2:-28:0.779
chr10	81247362	81247481	reg1002834.p1	5.902	+	TSC_hg19_v1_chr10_-_81205381 AK308876 AK075279 BC053564 BC039249 BC028617 NM_153367	-42161	-	TSC_hg19_v1_chr10_+_81107279 AB529152 CU678858 EU831447	-140134	+	BC013204 BC110299 TSC_hg19_v1_chr10_+_81107252	-140172	+	BC070048 NM_001099692	24935	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	72730	-	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	123283	+	AK308876|ZCCHC24|219654|zinc finger, CCHC domain containing 24##AK075279|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC053564|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC039249|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC028617|ZCCHC24|219654|zinc finger, CCHC domain containing 24##NM_153367|ZCCHC24|219654|zinc finger, CCHC domain containing 24##EU831447|PPIF|10105|peptidylprolyl isomerase F##BC013204|PPIF|10105|peptidylprolyl isomerase F##BC110299|PPIF|10105|peptidylprolyl isomerase F##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1	0.0	
chr1	178024377	178024485	reg1017824.p2	5.902	+	TSC_hg19_v1_chr1_-_178007060 AK092831 BX538051 AB067515	-17332	-	BC009106 TSC_hg19_v1_chr1_-_177939393	-85061	-	AB063357 NM_033127 TSC_hg19_v1_chr1_-_177939202	-85305	-	AK124464 TSC_hg19_v1_chr1_-_178062762	38322	-	TSC_hg19_v1_chr1_+_178062868 AK075169 NM_170692 AK311017	38419	+	AB209789 TSC_hg19_v1_chr1_+_178062968	38549	+	AK092831|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##BX538051|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##BC009106|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AB063357|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##NM_033127|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AK124464|LOC100302401|100302401|uncharacterized LOC100302401##AK075169|RASAL2|9462|RAS protein activator like 2##NM_170692|RASAL2|9462|RAS protein activator like 2##AK311017|RASAL2|9462|RAS protein activator like 2##AB209789|RASAL2|9462|RAS protein activator like 2	0.951519	CTCF.p2:4:0.952
chr3	32381678	32381825	reg1024413.p1	5.902	+	TSC_hg19_v1_chr3_+_32280215 BC041390	-101532	+	TSC_hg19_v1_chr3_+_32280171 AF474370 AY598783 NM_178868	-101586	+	TSC_hg19_v1_chr3_+_32148151 BC028726 AK292808 AB385275	-233583	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	51418	+	TSC_hg19_v1_chr3_+_32433370 BC010116 AY174113 DQ132881 AK308878	51652	+	CR457231 TSC_hg19_v1_chr3_-_32544290	162521	-	BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AF474370|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AY598783|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##NM_178868|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##BC028726|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AK292808|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##BC010116|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AY174113|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##DQ132881|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AK308878|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##CR457231|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6	0.776363	CTCF.p2:26:0.776
chr11	12257282	12257396	reg1003085.p1	5.901	+	TSC_hg19_v1_chr11_+_12132122 BC044577 NM_014632 BC015755 AB018293	-125209	+	TSC_hg19_v1_chr11_-_12030884 AB057591 NM_013253	-226437	-	TSC_hg19_v1_chr11_-_12030877 AY358378	-226481	-	AK123671 NM_032867	51107	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	141770	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	438624	+	BC044577|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_014632|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##BC015755|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB018293|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB057591|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_013253|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AY358378|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)	0.0	
chr16	14013621	14013768	reg1020759.p2	5.901	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-1018226	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-1115975	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-1116043	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	337	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	151392	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	266824	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.542219	CTCF.p2:20:0.526
chr16	34625878	34625983	reg1020811.p2	5.901	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-1363797	+	AL133588 NM_016212	-1364416	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-1420332	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	12029342	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	12029376	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	12097132	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.916493	CTCF.p2:2:0.916
chr17	27618279	27618405	reg1023315.p1	5.901	+	NM_005208 BC113693 BC069537 CU686900 HQ258110	-44465	+	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	-110992	-	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	-150931	-	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	2768	-	TSC_hg19_v1_chr17_-_27621167 AK293075 NM_020772	2823	-	NM_020791 NM_025142 BC133039 BC144067	99603	+	NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1##CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020791|TAOK1|57551|TAO kinase 1##NM_025142|TAOK1|57551|TAO kinase 1##BC133039|TAOK1|57551|TAO kinase 1##BC144067|TAOK1|57551|TAO kinase 1	0.95148	CTCF.p2:12:0.951
chr18	497114	497231	reg1023761.p2	5.901	+	AK097544 TSC_hg19_v1_chr18_+_268153	-229019	+	TSC_hg19_v1_chr18_-_268046 AY573302 AY573303 CU679685 DQ892768 EU176747 AK225709 L36529 AK314755 AK225067 BC010381 NM_005131	-229139	-	TSC_hg19_v1_chr18_+_158587 U30888 AB528508 DQ890594 DQ893762 CU678498 BT007183	-338530	+	AB005145 TSC_hg19_v1_chr18_-_500702 BC060789 AB038518 NM_130386	3512	-	BC029515 NM_004066 U03270 AK312047 CU688680 DQ890970 DQ894144	83210	+	BC025381 NM_014410 AK299319	99837	+	AY573302|THOC1|9984|THO complex 1##AY573303|THOC1|9984|THO complex 1##DQ892768|THOC1|9984|THO complex 1##EU176747|THOC1|9984|THO complex 1##AK225709|THOC1|9984|THO complex 1##L36529|THOC1|9984|THO complex 1##AK314755|THOC1|9984|THO complex 1##AK225067|THOC1|9984|THO complex 1##BC010381|THOC1|9984|THO complex 1##NM_005131|THOC1|9984|THO complex 1##U30888|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##DQ890594|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##DQ893762|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##BT007183|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AB005145|COLEC12|81035|collectin sub-family member 12##BC060789|COLEC12|81035|collectin sub-family member 12##AB038518|COLEC12|81035|collectin sub-family member 12##NM_130386|COLEC12|81035|collectin sub-family member 12##BC029515|CETN1|1068|centrin, EF-hand protein, 1##NM_004066|CETN1|1068|centrin, EF-hand protein, 1##U03270|CETN1|1068|centrin, EF-hand protein, 1##AK312047|CETN1|1068|centrin, EF-hand protein, 1##DQ890970|CETN1|1068|centrin, EF-hand protein, 1##DQ894144|CETN1|1068|centrin, EF-hand protein, 1##BC025381|CLUL1|27098|clusterin-like 1 (retinal)##NM_014410|CLUL1|27098|clusterin-like 1 (retinal)##AK299319|CLUL1|27098|clusterin-like 1 (retinal)	0.0	
chr2	113403130	113403259	reg1024040.p1	5.901	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-61005	+	TSC_hg19_v1_chr2_+_113342023 AK024631 BC004498 NM_032309 AK312219	-61156	+	BX647360 BC110833 BC150139 AK294027 TSC_hg19_v1_chr2_+_113300041 AK001678 AK301178 AK022533 BX647683	-103275	+	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	326	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	119028	-	NM_000575 BC035169	139778	-	AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BC004498|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_032309|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK312219|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BX647360|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BC110833|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BC150139|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK294027|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK001678|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK301178|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK022533|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BX647683|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha	0.0	
chr5	94120940	94121049	reg1024008.p2	5.901	+	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	-166621	+	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	-166737	-	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	-673674	-	AK025997 TSC_hg19_v1_chr5_-_94224607	103612	-	AY656716 AK058012 BC030005 AK057694 TSC_hg19_v1_chr5_-_94417350	296274	-	NM_001002796	296550	-	BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1##AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1##BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1##AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_001002796|MCTP1|79772|multiple C2 domains, transmembrane 1	0.0	
chr7	123275764	123275864	reg1024083.p1	5.901	+	AF428257 BC100874 BC100875 BC100876 BC100877 NM_080928	-26721	+	CR933664 BT006695 TSC_hg19_v1_chr7_-_123197862 AK022209 BC020821 BC070236 BC070237 U64028 AK315458 U53468 BC000813 NM_005000	-77924	-	BC091520 BC128181 BC128182 AK093153 AX747958 BC032838 BC068607 NM_178827	-101170	-	NM_207163 AK299434 AK299389 AK300698 AK309449 BC017911 BC062765 AK309496 AB591033	20123	+	TSC_hg19_v1_chr7_-_123389069 AM295156 CU690940 AB587496 BC013776 AK289795 D88460 CR749438 BC028602 BC052955 NM_003941	113160	-	AF009010 NM_012269	209408	+	AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15##NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15##CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC091520|IQUB|154865|IQ motif and ubiquitin domain containing##BC128181|IQUB|154865|IQ motif and ubiquitin domain containing##BC128182|IQUB|154865|IQ motif and ubiquitin domain containing##AK093153|IQUB|154865|IQ motif and ubiquitin domain containing##BC032838|IQUB|154865|IQ motif and ubiquitin domain containing##BC068607|IQUB|154865|IQ motif and ubiquitin domain containing##NM_178827|IQUB|154865|IQ motif and ubiquitin domain containing##NM_207163|LMOD2|442721|leiomodin 2 (cardiac)##AK299434|LMOD2|442721|leiomodin 2 (cardiac)##AK299389|LMOD2|442721|leiomodin 2 (cardiac)##AK300698|LMOD2|442721|leiomodin 2 (cardiac)##BC017911|LMOD2|442721|leiomodin 2 (cardiac)##BC062765|LMOD2|442721|leiomodin 2 (cardiac)##AM295156|WASL|8976|Wiskott-Aldrich syndrome-like##BC013776|WASL|8976|Wiskott-Aldrich syndrome-like##AK289795|WASL|8976|Wiskott-Aldrich syndrome-like##D88460|WASL|8976|Wiskott-Aldrich syndrome-like##CR749438|WASL|8976|Wiskott-Aldrich syndrome-like##BC028602|WASL|8976|Wiskott-Aldrich syndrome-like##BC052955|WASL|8976|Wiskott-Aldrich syndrome-like##NM_003941|WASL|8976|Wiskott-Aldrich syndrome-like##AF009010|HYAL4|23553|hyaluronoglucosaminidase 4##NM_012269|HYAL4|23553|hyaluronoglucosaminidase 4	0.135681	
chr6	558193	558334	reg1025149.p1	5.900	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-166499	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-265766	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-266178	+	AF508547 BC101697 BC101699 NM_148959	98690	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	134827	-	BC053850 NM_033260	754411	+	NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1	0.98526	CTCF.p2:17:0.985
chr11	120039916	120040073	reg1023849.p1	5.899	+	TSC_hg19_v1_chr11_-_120008858 AF230388 AF230389 L24203 NM_012101	-31139	-	BC017352 BC010644 TSC_hg19_v1_chr11_-_120008822 AK223090 AK122720	-31182	-	AB464321 CU675956 EU446943 TSC_hg19_v1_chr11_-_120008772	-31239	-	TSC_hg19_v1_chr11_+_120081739 BC047726 NM_178507 BC008339	41719	+	AK302212 NM_001244682	67354	+	AK291993 NM_014352 AF162278 BC101649 BC143593 BC143594 BC143595 AF133895 AJ012214 EU446698	70983	+	AF230388|TRIM29|23650|tripartite motif containing 29##AF230389|TRIM29|23650|tripartite motif containing 29##L24203|TRIM29|23650|tripartite motif containing 29##NM_012101|TRIM29|23650|tripartite motif containing 29##BC017352|TRIM29|23650|tripartite motif containing 29##BC010644|TRIM29|23650|tripartite motif containing 29##AK223090|TRIM29|23650|tripartite motif containing 29##AK122720|TRIM29|23650|tripartite motif containing 29##EU446943|TRIM29|23650|tripartite motif containing 29##BC047726|OAF|220323|OAF homolog (Drosophila)##NM_178507|OAF|220323|OAF homolog (Drosophila)##BC008339|OAF|220323|OAF homolog (Drosophila)##AK302212|POU2F3|25833|POU class 2 homeobox 3##NM_001244682|POU2F3|25833|POU class 2 homeobox 3##AK291993|POU2F3|25833|POU class 2 homeobox 3##NM_014352|POU2F3|25833|POU class 2 homeobox 3##AF162278|POU2F3|25833|POU class 2 homeobox 3##BC101649|POU2F3|25833|POU class 2 homeobox 3##BC143593|POU2F3|25833|POU class 2 homeobox 3##BC143594|POU2F3|25833|POU class 2 homeobox 3##BC143595|POU2F3|25833|POU class 2 homeobox 3##AF133895|POU2F3|25833|POU class 2 homeobox 3##AJ012214|POU2F3|25833|POU class 2 homeobox 3##EU446698|POU2F3|25833|POU class 2 homeobox 3	0.268874	CTCF.p2:-7:0.269
chr1	206957770	206957950	reg1019873.p1	5.899	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-11981	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-99389	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-148750	+	AY040367 NM_153758 AB463800	14366	+	AF453946 NM_013371	44361	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	81315	+	AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20	0.0	
chr20	56051191	56051371	reg1024518.p2	5.899	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-84824	+	NM_001190472	-116404	-	AK292247 AY349350 NM_001015885	-124680	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	48920	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	84876	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	144257	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.374295	CTCF.p2:-61:0.374
chr3	124553860	124554040	reg1023937.p1	5.899	+	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	-104634	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	-104711	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	-250422	+	TSC_hg19_v1_chr3_-_124605863 AB587397 DQ892778 DQ896025 M35011 AK315429 J05633	51916	-	TSC_hg19_v1_chr3_-_124606213 BC006541 NM_002213 X53002	52261	-	AF286113 AB035807 AY358831 TSC_hg19_v1_chr3_-_124653596 NM_033049	99633	-	AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##DQ892778|ITGB5|3693|integrin, beta 5##DQ896025|ITGB5|3693|integrin, beta 5##M35011|ITGB5|3693|integrin, beta 5##AK315429|ITGB5|3693|integrin, beta 5##J05633|ITGB5|3693|integrin, beta 5##BC006541|ITGB5|3693|integrin, beta 5##NM_002213|ITGB5|3693|integrin, beta 5##X53002|ITGB5|3693|integrin, beta 5##AF286113|MUC13|56667|mucin 13, cell surface associated##AB035807|MUC13|56667|mucin 13, cell surface associated##AY358831|MUC13|56667|mucin 13, cell surface associated##NM_033049|MUC13|56667|mucin 13, cell surface associated	0.848169	CTCF.p2:34:0.848
chr5	154407728	154407857	reg1024956.p1	5.899	+	NM_001099293 AK302388	-14506	+	TSC_hg19_v1_chr5_+_154320654 NM_001014990 NM_014180 AK000601 AK302784 CR933679 BC012565 AF161507 CU680362	-87143	+	TSC_hg19_v1_chr5_-_154317760 AB385260 AY063750 AK022748 BC113614 BC143724 BC036894 BC040931 AK074066 AK315101 NM_001252156 NM_015465	-90076	-	BX537948 NM_000337 NM_001128209 NM_172244	1345968	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	1346381	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	1982443	-	NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##NM_001014990|MRPL22|29093|mitochondrial ribosomal protein L22##NM_014180|MRPL22|29093|mitochondrial ribosomal protein L22##AK000601|MRPL22|29093|mitochondrial ribosomal protein L22##AK302784|MRPL22|29093|mitochondrial ribosomal protein L22##CR933679|MRPL22|29093|mitochondrial ribosomal protein L22##BC012565|MRPL22|29093|mitochondrial ribosomal protein L22##AF161507|MRPL22|29093|mitochondrial ribosomal protein L22##AY063750|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK022748|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC113614|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC143724|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC036894|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC040931|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK074066|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK315101|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_001252156|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_015465|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4	0.123607	
chr10	30870855	30870954	reg1023969.p1	5.898	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-147783	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-147965	+	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	-232671	-	AF139543 BC066294 NM_183058	47731	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	417548	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	449917	-	AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438	0.985003	CTCF.p2:0:0.985
chr1	111535108	111535215	reg1024639.p1	5.898	+	TSC_hg19_v1_chr1_-_111506545 AY190122 NM_001006945 NM_018372 CR933637	-28610	-	BC040693 TSC_hg19_v1_chr1_+_111415791 M37033 M60871	-119359	+	NM_000560 TSC_hg19_v1_chr1_+_111415769 AK313582 AK298723	-119406	+	BC049196 NM_001007794 AL833102 TSC_hg19_v1_chr1_+_111682370	147148	+	AL833098 TSC_hg19_v1_chr1_-_111682678 AY358492	147523	-	TSC_hg19_v1_chr1_-_111682718 AY336747 BC091509	147570	-	AY190122|LRIF1|55791|ligand dependent nuclear receptor interacting factor 1##NM_001006945|LRIF1|55791|ligand dependent nuclear receptor interacting factor 1##NM_018372|LRIF1|55791|ligand dependent nuclear receptor interacting factor 1##BC040693|CD53|963|CD53 molecule##M37033|CD53|963|CD53 molecule##M60871|CD53|963|CD53 molecule##NM_000560|CD53|963|CD53 molecule##AK313582|CD53|963|CD53 molecule##AK298723|CD53|963|CD53 molecule##BC049196|CEPT1|10390|choline/ethanolamine phosphotransferase 1##NM_001007794|CEPT1|10390|choline/ethanolamine phosphotransferase 1##AL833102|CEPT1|10390|choline/ethanolamine phosphotransferase 1##AL833098|DRAM2|128338|DNA-damage regulated autophagy modulator 2##AY358492|DRAM2|128338|DNA-damage regulated autophagy modulator 2##AY336747|DRAM2|128338|DNA-damage regulated autophagy modulator 2##BC091509|DRAM2|128338|DNA-damage regulated autophagy modulator 2	0.963678	CTCF.p2:-3:0.964
chr1	36982083	36982187	reg1022847.p1	5.898	+	NM_000760 NM_156039 NM_172313	-33221	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-33651	-	TSC_hg19_v1_chr1_-_36929984 AB049946 AB209905 AK021626 BC031336 AF265439 AK315441 AK302633 NM_031280	-52176	-	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	517640	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	957962	+	TSC_hg19_v1_chr1_+_37940140 AK026884	958015	+	NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AB049946|MRPS15|64960|mitochondrial ribosomal protein S15##AB209905|MRPS15|64960|mitochondrial ribosomal protein S15##AK021626|MRPS15|64960|mitochondrial ribosomal protein S15##BC031336|MRPS15|64960|mitochondrial ribosomal protein S15##AF265439|MRPS15|64960|mitochondrial ribosomal protein S15##AK315441|MRPS15|64960|mitochondrial ribosomal protein S15##AK302633|MRPS15|64960|mitochondrial ribosomal protein S15##NM_031280|MRPS15|64960|mitochondrial ribosomal protein S15##AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.99653	CTCF.p2:-1:0.997
chr14	96077737	96077854	reg1022362.p1	5.898	+	TSC_hg19_v1_chr14_+_96001402 DQ083331	-76362	+	AB223038 TSC_hg19_v1_chr14_+_96001383	-76412	+	TSC_hg19_v1_chr14_+_96001362 BX248075 BC023528 BC047680	-76427	+	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	74983	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	102672	-	AK023027 TSC_hg19_v1_chr14_+_96342762	264950	+	DQ083331|GLRX5|51218|glutaredoxin 5##AB223038|GLRX5|51218|glutaredoxin 5##BX248075|GLRX5|51218|glutaredoxin 5##BC023528|GLRX5|51218|glutaredoxin 5##BC047680|GLRX5|51218|glutaredoxin 5##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##AK023027|LOC100507043|100507043|uncharacterized LOC100507043	0.0	
chr16	62224478	62224601	reg1026582.p1	5.898	+	AK124734 NM_001796	-153801	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-3456342	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-3505883	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	2931363	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	2931429	-	TSC_hg19_v1_chr16_-_65155987 AK297377	2931455	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.024304	
chr21	42741421	42741563	reg1025079.p1	5.898	+	TSC_hg19_v1_chr21_+_42733956 M30818 NM_002463 AK308060 AK126107	-7554	+	AK125528 NM_058186 NM_206964 TSC_hg19_v1_chr21_+_42688738 BC057829 AF375989 AJ409094 AY040086 AY358459 HQ257913 AF494379	-52759	+	AK302095 BC036314 TSC_hg19_v1_chr21_+_42676236	-65286	+	TSC_hg19_v1_chr21_+_42742025 AK298780	527	+	AK096355 NM_001144925	50988	+	NM_002462 TSC_hg19_v1_chr21_+_42798165 AK225885 AK315465 NM_001178046 M33882 BC052255	56602	+	M30818|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##NM_002463|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK308060|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK126107|LOC100131190|100131190|uncharacterized LOC100131190##AK125528|FAM3B|54097|family with sequence similarity 3, member B##NM_058186|FAM3B|54097|family with sequence similarity 3, member B##NM_206964|FAM3B|54097|family with sequence similarity 3, member B##BC057829|FAM3B|54097|family with sequence similarity 3, member B##AF375989|FAM3B|54097|family with sequence similarity 3, member B##AJ409094|FAM3B|54097|family with sequence similarity 3, member B##AY040086|FAM3B|54097|family with sequence similarity 3, member B##AY358459|FAM3B|54097|family with sequence similarity 3, member B##HQ257913|FAM3B|54097|family with sequence similarity 3, member B##AF494379|FAM3B|54097|family with sequence similarity 3, member B##BC036314|FAM3B|54097|family with sequence similarity 3, member B##AK298780|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK096355|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001144925|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_002462|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK225885|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK315465|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001178046|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##M33882|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##BC052255|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)	0.932622	CTCF.p2:27:0.933
chr5	74345758	74345889	reg1026414.p1	5.898	+	AF132035 NM_016591	-19100	-	AB020695 NM_015566 AK290004	-183185	-	BC039003 TSC_hg19_v1_chr5_+_74161735	-184097	+	AK097510 NM_001164443	186879	-	NM_000859 NM_001130996 TSC_hg19_v1_chr5_+_74633004	287181	+	TSC_hg19_v1_chr5_+_74633022 BC024180	287206	+	AF132035|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##NM_016591|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##AB020695|FAM169A|26049|family with sequence similarity 169, member A##NM_015566|FAM169A|26049|family with sequence similarity 169, member A##AK290004|FAM169A|26049|family with sequence similarity 169, member A##BC039003|LOC441086|441086|uncharacterized LOC441086##AK097510|ANKRD31|256006|ankyrin repeat domain 31##NM_001164443|ANKRD31|256006|ankyrin repeat domain 31##NM_000859|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##NM_001130996|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##BC024180|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase	0.057675	
chr17	29241153	29241272	reg1022668.p1	5.897	+	CU692922 TSC_hg19_v1_chr17_-_29233257 AJ314645 AK026382 AK225474 BC024328 AK298495 NM_024683	-7961	-	TSC_hg19_v1_chr17_+_29158987 AL832103 BC015051 AJ314648 AY557611 NM_024857	-82227	+	TSC_hg19_v1_chr17_-_29151725 AK313315 NM_015986	-89449	-	AK074196 AJ238994 AJ242782 NM_018404 TSC_hg19_v1_chr17_+_29248960 AK074204 AK222526 AJ272195 BC033758 DQ288859	7620	+	NM_001184992 NM_032322 NM_197939 TSC_hg19_v1_chr17_+_29298040 BC126420 BC126422 BC144143 AJ496729 BC005084	56786	+	TSC_hg19_v1_chr17_+_29298062 AK226030 BC082262 AK312979 AK122646 AK122709 AB470605 AY598332	56928	+	AJ314645|C17orf42|79736|chromosome 17 open reading frame 42##AK026382|C17orf42|79736|chromosome 17 open reading frame 42##AK225474|C17orf42|79736|chromosome 17 open reading frame 42##BC024328|C17orf42|79736|chromosome 17 open reading frame 42##AK298495|C17orf42|79736|chromosome 17 open reading frame 42##NM_024683|C17orf42|79736|chromosome 17 open reading frame 42##AL832103|ATAD5|79915|ATPase family, AAA domain containing 5##BC015051|ATAD5|79915|ATPase family, AAA domain containing 5##AJ314648|ATAD5|79915|ATPase family, AAA domain containing 5##AY557611|ATAD5|79915|ATPase family, AAA domain containing 5##NM_024857|ATAD5|79915|ATPase family, AAA domain containing 5##AK313315|CRLF3|51379|cytokine receptor-like factor 3##NM_015986|CRLF3|51379|cytokine receptor-like factor 3##AK074196|ADAP2|55803|ArfGAP with dual PH domains 2##AJ238994|ADAP2|55803|ArfGAP with dual PH domains 2##AJ242782|ADAP2|55803|ArfGAP with dual PH domains 2##NM_018404|ADAP2|55803|ArfGAP with dual PH domains 2##AK074204|ADAP2|55803|ArfGAP with dual PH domains 2##AK222526|ADAP2|55803|ArfGAP with dual PH domains 2##AJ272195|ADAP2|55803|ArfGAP with dual PH domains 2##BC033758|ADAP2|55803|ArfGAP with dual PH domains 2##DQ288859|ADAP2|55803|ArfGAP with dual PH domains 2##NM_001184992|RNF135|84282|ring finger protein 135##NM_032322|RNF135|84282|ring finger protein 135##NM_197939|RNF135|84282|ring finger protein 135##BC126420|RNF135|84282|ring finger protein 135##BC126422|RNF135|84282|ring finger protein 135##BC144143|RNF135|84282|ring finger protein 135##AJ496729|RNF135|84282|ring finger protein 135##BC005084|RNF135|84282|ring finger protein 135##AK226030|RNF135|84282|ring finger protein 135##BC082262|RNF135|84282|ring finger protein 135##AK312979|RNF135|84282|ring finger protein 135##AK122646|RNF135|84282|ring finger protein 135##AK122709|RNF135|84282|ring finger protein 135##AB470605|RNF135|84282|ring finger protein 135##AY598332|RNF135|84282|ring finger protein 135	0.031851	
chr20	25299365	25299508	reg1024816.p2	5.897	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	-70678	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	-122956	+	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	-123066	+	CU680756 AK075023 AK290815 AK293495 TSC_hg19_v1_chr20_-_25371426	71949	-	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	72090	-	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	88886	+	NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK075023|ABHD12|26090|abhydrolase domain containing 12##AK290815|ABHD12|26090|abhydrolase domain containing 12##AK293495|ABHD12|26090|abhydrolase domain containing 12##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	0.0	
chr4	155250549	155250670	reg1024728.p1	5.897	+	BC008666 AK075372 AK093922 TSC_hg19_v1_chr4_-_154710236 AF311912 NM_003013	-540385	-	BC034385 NM_173662	-569223	-	TSC_hg19_v1_chr4_-_154681150 AK091509 AX747029	-569453	-	AY354497 NM_017639	61839	-	TSC_hg19_v1_chr4_-_155412411 AY354498 BC140919	161873	-	AK127704 NM_001142552 NM_001142553 TSC_hg19_v1_chr4_-_155412931	162298	-	BC008666|SFRP2|6423|secreted frizzled-related protein 2##AK075372|SFRP2|6423|secreted frizzled-related protein 2##AK093922|SFRP2|6423|secreted frizzled-related protein 2##AF311912|SFRP2|6423|secreted frizzled-related protein 2##NM_003013|SFRP2|6423|secreted frizzled-related protein 2##BC034385|RNF175|285533|ring finger protein 175##NM_173662|RNF175|285533|ring finger protein 175##AK091509|RNF175|285533|ring finger protein 175##AY354497|DCHS2|54798|dachsous 2 (Drosophila)##NM_017639|DCHS2|54798|dachsous 2 (Drosophila)##AY354498|DCHS2|54798|dachsous 2 (Drosophila)##BC140919|DCHS2|54798|dachsous 2 (Drosophila)##AK127704|DCHS2|54798|dachsous 2 (Drosophila)##NM_001142552|DCHS2|54798|dachsous 2 (Drosophila)##NM_001142553|DCHS2|54798|dachsous 2 (Drosophila)	0.981635	CTCF.p2:3:0.982
chr9	5799367	5799492	reg1024480.p2	5.897	+	BC036853 TSC_hg19_v1_chr9_-_5630098	-169339	-	TSC_hg19_v1_chr9_+_5629121 NM_001135920 NM_001206557 NM_020829	-170302	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	-288766	+	AL834191 AB058718 TSC_hg19_v1_chr9_-_5833045 BC136771 BC136773 BC144404	33522	-	TSC_hg19_v1_chr9_-_5833067 AK127218	33638	-	TSC_hg19_v1_chr9_-_5833082 NM_024896	33649	-	BC036853|C9orf46|55848|chromosome 9 open reading frame 46##NM_001135920|KIAA1432|57589|KIAA1432##NM_001206557|KIAA1432|57589|KIAA1432##NM_020829|KIAA1432|57589|KIAA1432##AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2##AL834191|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AB058718|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136771|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136773|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC144404|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AK127218|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##NM_024896|ERMP1|79956|endoplasmic reticulum metallopeptidase 1	0.644998	CTCF.p2:-10:0.645
chrX	153811415	153811506	reg1022081.p1	5.897	+	AF261086 NM_003639 AF091453	-35363	+	BC000299 TSC_hg19_v1_chrX_+_153775876 AK000593 BC046922 AF062089	-35591	+	BC050612 TSC_hg19_v1_chrX_+_153775834	-35629	+	NM_001327 NM_139250 U87459 BC130362 BC130364 AJ003149 AJ275978	2022	+	AJ275978 AJ003149 BC130362 BC130364 NM_001327 NM_139250 U87459	35995	-	AJ012833 AM393026 AM393495 AM393696 AM393839 AB463462 BC002833 BC113998 BC114933 BC128045 AJ223041 AY679088 AY679089 AJ012834 AJ012835 AJ223040 NM_020994 NM_172377	70344	-	AF261086|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##NM_003639|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AF091453|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC000299|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AK000593|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC046922|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AF062089|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC050612|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##AJ012833|CTAG2|30848|cancer/testis antigen 2##AM393026|CTAG2|30848|cancer/testis antigen 2##AM393495|CTAG2|30848|cancer/testis antigen 2##AM393696|CTAG2|30848|cancer/testis antigen 2##AM393839|CTAG2|30848|cancer/testis antigen 2##BC002833|CTAG2|30848|cancer/testis antigen 2##BC113998|CTAG2|30848|cancer/testis antigen 2##BC114933|CTAG2|30848|cancer/testis antigen 2##BC128045|CTAG2|30848|cancer/testis antigen 2##AJ223041|CTAG2|30848|cancer/testis antigen 2##AY679088|CTAG2|30848|cancer/testis antigen 2##AY679089|CTAG2|30848|cancer/testis antigen 2##AJ012834|CTAG2|30848|cancer/testis antigen 2##AJ012835|CTAG2|30848|cancer/testis antigen 2##AJ223040|CTAG2|30848|cancer/testis antigen 2##NM_020994|CTAG2|30848|cancer/testis antigen 2##NM_172377|CTAG2|30848|cancer/testis antigen 2	0.995652	CTCF.p2:10:0.996
chr1	204777327	204777431	reg1005993.p4	5.896	+	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	-122788	-	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	-291769	+	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	-291877	+	TSC_hg19_v1_chr1_+_204797779 BC040674 NM_001005388 NM_001005389 NM_001160332 NM_001160333 NM_015090 AK295291 AK299262 AK090639 AX746553	20433	+	TSC_hg19_v1_chr1_+_204839989 AK308686	62604	+	NM_001160331 BC137013 BC144454 BC144455 AB384522	136019	+	AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2##AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC040674|NFASC|23114|neurofascin##NM_001005388|NFASC|23114|neurofascin##NM_001005389|NFASC|23114|neurofascin##NM_001160332|NFASC|23114|neurofascin##NM_001160333|NFASC|23114|neurofascin##NM_015090|NFASC|23114|neurofascin##AK295291|NFASC|23114|neurofascin##AK299262|NFASC|23114|neurofascin##AK090639|NFASC|23114|neurofascin##AK308686|NFASC|23114|neurofascin##NM_001160331|NFASC|23114|neurofascin##BC137013|NFASC|23114|neurofascin##BC144454|NFASC|23114|neurofascin##BC144455|NFASC|23114|neurofascin	0.022108	
chr12	27374680	27374789	reg1025814.p1	5.896	+	NM_001080406	-139280	-	TSC_hg19_v1_chr12_+_27175501 U46837 U52960 AB463863 EU446930 AK311838 CR456999	-199219	+	AK309064 BC008380 NM_004264 TSC_hg19_v1_chr12_+_27175482	-199252	+	NM_015000 BC028603 TSC_hg19_v1_chr12_+_27397168	22390	+	TSC_hg19_v1_chr12_+_27397187 AK291055	22453	+	TSC_hg19_v1_chr12_+_27397225 AK304755	22491	+	NM_001080406|C12orf71|728858|chromosome 12 open reading frame 71##U46837|MED21|9412|mediator complex subunit 21##U52960|MED21|9412|mediator complex subunit 21##EU446930|MED21|9412|mediator complex subunit 21##AK311838|MED21|9412|mediator complex subunit 21##CR456999|MED21|9412|mediator complex subunit 21##AK309064|MED21|9412|mediator complex subunit 21##BC008380|MED21|9412|mediator complex subunit 21##NM_004264|MED21|9412|mediator complex subunit 21##NM_015000|STK38L|23012|serine/threonine kinase 38 like##BC028603|STK38L|23012|serine/threonine kinase 38 like##AK291055|STK38L|23012|serine/threonine kinase 38 like##AK304755|STK38L|23012|serine/threonine kinase 38 like	0.0	
chr15	82824900	82825046	reg1025064.p1	5.896	+	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	-80	-	NM_198181 CR936812	-102757	+	TSC_hg19_v1_chr15_+_82647308 BC066934	-177642	+	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	119819	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	119917	+	CR936602 NM_001164465	193205	-	BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10	0.952883	CTCF.p2:-9:0.953
chr16	70910515	70910667	reg1029403.p1	5.896	+	TSC_hg19_v1_chr16_-_70835074 AK056433	-75501	-	TSC_hg19_v1_chr16_-_70835062 AK307766	-75529	-	NM_018052 TSC_hg19_v1_chr16_-_70835060	-75531	-	AK022933 NM_032821 TSC_hg19_v1_chr16_-_71264588 NM_017558	353983	-	TSC_hg19_v1_chr16_-_71264605 BC028351 AK299016 AK299348 NM_001198542 NM_001198543	354023	-	AK000289 TSC_hg19_v1_chr16_-_71318858	408219	-	AK056433|VAC14|55697|Vac14 homolog (S. cerevisiae)##AK307766|VAC14|55697|Vac14 homolog (S. cerevisiae)##NM_018052|VAC14|55697|Vac14 homolog (S. cerevisiae)##AK022933|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_032821|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_017558|HYDIN|54768|hydrocephalus inducing homolog (mouse)##BC028351|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK299016|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK299348|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001198542|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001198543|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK000289|FTSJD1|55783|FtsJ methyltransferase domain containing 1	0.627479	CTCF.p2:-4:0.627
chr1	91082057	91082181	reg1023538.p1	5.896	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	-621403	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-794555	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-794661	+	BC126439 BC126441 AY338397 NM_020063	100666	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	404919	-	TSC_hg19_v1_chr1_-_91487583 BC041138 AK291520	405444	-	NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644##BC041138|ZNF644|84146|zinc finger protein 644##AK291520|ZNF644|84146|zinc finger protein 644	0.348709	CTCF.p2:-6:0.234
chr8	27104920	27105033	reg1022385.p1	5.896	+	AB527631 CU679938 DQ891040 DQ894219 TSC_hg19_v1_chr8_-_27101279 AJ303455	-3698	-	TSC_hg19_v1_chr8_-_26724764 AK289548	-380218	-	AK311558 TSC_hg19_v1_chr8_-_26724735	-380242	-	TSC_hg19_v1_chr8_-_27115922 BC011520 NM_030795 BC111001 AK295329 AK225142 AK294023 AK309207 AL136568	10936	-	TSC_hg19_v1_chr8_-_27115938 AK297415	10981	-	EU446781 TSC_hg19_v1_chr8_-_27168779 AK308236 BC069226	63790	-	DQ891040|STMN4|81551|stathmin-like 4##DQ894219|STMN4|81551|stathmin-like 4##AJ303455|STMN4|81551|stathmin-like 4##AK289548|ADRA1A|148|adrenergic, alpha-1A-, receptor##BC011520|STMN4|81551|stathmin-like 4##NM_030795|STMN4|81551|stathmin-like 4##BC111001|STMN4|81551|stathmin-like 4##AK295329|STMN4|81551|stathmin-like 4##AK225142|STMN4|81551|stathmin-like 4##AK294023|STMN4|81551|stathmin-like 4##AK309207|STMN4|81551|stathmin-like 4##AL136568|STMN4|81551|stathmin-like 4##AK297415|STMN4|81551|stathmin-like 4##EU446781|TRIM35|23087|tripartite motif containing 35##AK308236|TRIM35|23087|tripartite motif containing 35##BC069226|TRIM35|23087|tripartite motif containing 35	1.004591	CTCF.p2:-1:0.992
chr11	65686775	65686909	reg1024824.p1	5.895	+	NM_006442 TSC_hg19_v1_chr11_+_65686745	-103	+	AF073483 TSC_hg19_v1_chr11_-_65686528 BC013185 NM_001135635 NM_031450	-344	-	TSC_hg19_v1_chr11_-_65667860 AK299050 AK313718 NM_005438	-18894	-	TSC_hg19_v1_chr11_+_65686920 BC010025 AB463581 CU679579 EU446936 X96506	117	+	AK057442 BC104021 BC104022 BC104023 NM_152762	26272	+	NM_005146 TSC_hg19_v1_chr11_+_65729203 AK223016 AK293200 AK297589 AK309104 AK298184 BC001058 AB006198 AF353625 DQ891694 EU176645 BT006637 Y14314	42427	+	NM_006442|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##AF073483|C11orf68|83638|chromosome 11 open reading frame 68##BC013185|C11orf68|83638|chromosome 11 open reading frame 68##NM_001135635|C11orf68|83638|chromosome 11 open reading frame 68##NM_031450|C11orf68|83638|chromosome 11 open reading frame 68##AK299050|FOSL1|8061|FOS-like antigen 1##AK313718|FOSL1|8061|FOS-like antigen 1##NM_005438|FOSL1|8061|FOS-like antigen 1##BC010025|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##EU446936|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##X96506|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##AK057442|TSGA10IP|254187|testis specific, 10 interacting protein##BC104021|TSGA10IP|254187|testis specific, 10 interacting protein##BC104022|TSGA10IP|254187|testis specific, 10 interacting protein##BC104023|TSGA10IP|254187|testis specific, 10 interacting protein##NM_152762|TSGA10IP|254187|testis specific, 10 interacting protein##NM_005146|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK223016|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK293200|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK297589|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK298184|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BC001058|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AB006198|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AF353625|SART1|9092|squamous cell carcinoma antigen recognized by T cells##DQ891694|SART1|9092|squamous cell carcinoma antigen recognized by T cells##EU176645|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BT006637|SART1|9092|squamous cell carcinoma antigen recognized by T cells##Y14314|SART1|9092|squamous cell carcinoma antigen recognized by T cells	0.010507	
chr5	141268977	141269103	reg1024851.p1	5.895	+	BC035812 NM_002587 NM_032420 BC051287 BC075821 TSC_hg19_v1_chr5_-_141257976 AK289512	-11081	-	CU690208 TSC_hg19_v1_chr5_-_141257848	-11201	-	TSC_hg19_v1_chr5_-_141061801 NM_022481	-207223	-	TSC_hg19_v1_chr5_+_141303403 NM_001142603 NM_014773 BC007855 D50931 AK292869	34369	+	BC011926 TSC_hg19_v1_chr5_+_141303466 BC035486 BC010452 BC011269 CU680118	34444	+	AF240635 NM_016580	69586	-	BC035812|PCDH1|5097|protocadherin 1##NM_002587|PCDH1|5097|protocadherin 1##NM_032420|PCDH1|5097|protocadherin 1##BC051287|PCDH1|5097|protocadherin 1##BC075821|PCDH1|5097|protocadherin 1##AK289512|PCDH1|5097|protocadherin 1##NM_022481|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##NM_001142603|KIAA0141|9812|KIAA0141##NM_014773|KIAA0141|9812|KIAA0141##BC007855|KIAA0141|9812|KIAA0141##D50931|KIAA0141|9812|KIAA0141##AK292869|KIAA0141|9812|KIAA0141##BC011926|KIAA0141|9812|KIAA0141##BC035486|KIAA0141|9812|KIAA0141##BC010452|KIAA0141|9812|KIAA0141##BC011269|KIAA0141|9812|KIAA0141##AF240635|PCDH12|51294|protocadherin 12##NM_016580|PCDH12|51294|protocadherin 12	0.032549	
chr6_mcf_hap5	3996309	3996428	reg1023516.p1	5.895	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.517049	CTCF.p2:10:0.517
chr18	24584413	24584528	reg1005736.p1	5.894	+	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	-138754	-	U63623 NM_004028	-141916	-	AF542549 NM_198991	-364163	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	138409	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	180763	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	1172567	-	AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##U63623|AQP4|361|aquaporin 4##NM_004028|AQP4|361|aquaporin 4##AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	0.0	
chr1	239568937	239569064	reg1022469.p2	5.893	+	TSC_hg19_v1_chr1_+_239550016 AK056349	-19058	+	AK314151 NM_021186	-1514779	-	NM_001035 X98330 Y08218	-2363227	+	AF279779 NM_000740	223372	+	TSC_hg19_v1_chr1_+_240255182 NM_020066	686177	+	BC046632 TSC_hg19_v1_chr1_-_240775431	1206409	-	AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_020066|FMN2|56776|formin 2##BC046632|GREM2|64388|gremlin 2	0.998126	CTCF.p2:-36:0.998
chr12	45941741	45941864	reg1024314.p1	5.893	+	AL832340 NM_001142678	-255337	+	TSC_hg19_v1_chr12_+_45609916 BC098410	-331895	+	TSC_hg19_v1_chr12_+_45609867 AK302819 NM_001142680	-331931	+	TSC_hg19_v1_chr12_-_46121280 BC037237 BC008245	179471	-	TSC_hg19_v1_chr12_-_46121531 BC047417	179728	-	TSC_hg19_v1_chr12_+_46123488 AK127872	181681	+	AL832340|ANO6|196527|anoctamin 6##NM_001142678|ANO6|196527|anoctamin 6##BC098410|ANO6|196527|anoctamin 6##AK302819|ANO6|196527|anoctamin 6##NM_001142680|ANO6|196527|anoctamin 6##BC037237|LOC400027|400027|uncharacterized LOC400027##BC008245|LOC400027|400027|uncharacterized LOC400027##BC047417|LOC400027|400027|uncharacterized LOC400027##AK127872|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)	0.057301	
chr12	91334786	91334940	reg1027043.p1	5.893	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-1231318	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-1232176	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-1285012	-	BC026075 BC024183 BC027600 BC034491 NM_152638	14088	-	U59111 TSC_hg19_v1_chr12_-_91398750	63884	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	63916	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.309526	CTCF.p2:-7:0.310
chr17	42018097	42018188	reg1024230.p1	5.893	+	BC030287 CR936730 NM_005374 AK311166	-33023	-	AL136554 X82895 TSC_hg19_v1_chr17_-_41984895 AK299518 AK223560 AK294564 AK299286	-33247	-	TSC_hg19_v1_chr17_-_41977993 AK299321 CR936598	-40162	-	X00491 NM_002722	1674	-	BC041057 NM_004160	63694	-	AK314432 AK300923 BC111713 AY116538 NM_153006 AK074407	63876	+	BC030287|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##CR936730|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##NM_005374|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK311166|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AL136554|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299518|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK223560|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK294564|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299286|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##AK299321|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##CR936598|MPP2|4355|membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)##X00491|PPY|5539|pancreatic polypeptide##NM_002722|PPY|5539|pancreatic polypeptide##BC041057|PYY|5697|peptide YY##NM_004160|PYY|5697|peptide YY##AK314432|NAGS|162417|N-acetylglutamate synthase##AK300923|NAGS|162417|N-acetylglutamate synthase##BC111713|NAGS|162417|N-acetylglutamate synthase##AY116538|NAGS|162417|N-acetylglutamate synthase##NM_153006|NAGS|162417|N-acetylglutamate synthase##AK074407|NAGS|162417|N-acetylglutamate synthase	0.030642	
chr2	115923235	115923338	reg1023625.p1	5.893	+	NM_001178034 DQ857322 AK296490 NM_001004360 AY387785 AB040925 AB385475 DQ857323	-3625	+	NM_001178037 DQ857321	-100996	+	AK055256 BC038514 NM_001178036	-704120	+	NM_006773 TSC_hg19_v1_chr2_+_118572276 BC024739	2648982	+	AK001467 TSC_hg19_v1_chr2_+_118572283	2648997	+	TSC_hg19_v1_chr2_+_118572298 BC003360 BC001238	2649031	+	NM_001178034|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857322|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK296490|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001004360|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AY387785|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AB040925|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857323|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178037|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857321|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_006773|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC024739|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##AK001467|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC003360|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC001238|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	0.999451	CTCF.p2:4:0.999
chr6	138190600	138190700	reg1022957.p1	5.893	+	TSC_hg19_v1_chr6_-_138189314 AK124173	-1300	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-2113	+	BC051352 AK096362 NM_175747	-375125	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	237918	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	292486	+	BC069109 NM_021635 AF189269 AF189270	348976	-	AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1	0.0	
chr7	135330193	135330320	reg1024809.p1	5.893	+	TSC_hg19_v1_chr7_+_135242675 NM_015135 BC136624 AK297307 BC146784 D86978	-87568	+	BC035590 U71267 U71268 AL389980 TSC_hg19_v1_chr7_-_135194851 AK314540 AK074493 AK300365 NM_001008225 NM_001190847 NM_001190848 NM_001190849 NM_001190850 NM_013316	-135396	-	AB464251 AF513502 NM_182489	-413526	+	TSC_hg19_v1_chr7_+_135347230 NM_001130929 BC063529 BC073942 BC021734 BC107765 BC047474 BC016741 BC040872	17005	+	AF169301 NM_012450 BC030689 TSC_hg19_v1_chr7_-_135412940 AB208809	82680	-	BC137311 BC137312 AK297754 AY358803 AK290250 AK310180 NM_205855	103223	-	NM_015135|NUP205|23165|nucleoporin 205kDa##BC136624|NUP205|23165|nucleoporin 205kDa##AK297307|NUP205|23165|nucleoporin 205kDa##BC146784|NUP205|23165|nucleoporin 205kDa##D86978|NUP205|23165|nucleoporin 205kDa##BC035590|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71267|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71268|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AL389980|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK314540|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK074493|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK300365|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001008225|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190847|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190848|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190849|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190850|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_013316|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AB464251|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AF513502|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##NM_182489|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##NM_001130929|C7orf73|647087|chromosome 7 open reading frame 73##BC063529|C7orf73|647087|chromosome 7 open reading frame 73##BC073942|C7orf73|647087|chromosome 7 open reading frame 73##BC021734|C7orf73|647087|chromosome 7 open reading frame 73##BC107765|C7orf73|647087|chromosome 7 open reading frame 73##BC047474|C7orf73|647087|chromosome 7 open reading frame 73##BC016741|C7orf73|647087|chromosome 7 open reading frame 73##BC040872|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##AF169301|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##NM_012450|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##BC030689|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##AB208809|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##BC137311|FAM180A|389558|family with sequence similarity 180, member A##BC137312|FAM180A|389558|family with sequence similarity 180, member A##AK297754|FAM180A|389558|family with sequence similarity 180, member A##AY358803|FAM180A|389558|family with sequence similarity 180, member A##AK290250|FAM180A|389558|family with sequence similarity 180, member A##AK310180|FAM180A|389558|family with sequence similarity 180, member A##NM_205855|FAM180A|389558|family with sequence similarity 180, member A	0.847267	CTCF.p2:-1:0.847
chr7	69290141	69290255	reg1022514.p2	5.893	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-225610	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-225869	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-226362	+	TSC_hg19_v1_chr7_+_70231164 AK296981	941007	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1307590	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2511580	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.0	
chr8	101553038	101553135	reg1006037.p1	5.893	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-230801	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-230905	-	AB271913 AB271914 AB029316 NM_015435	-237615	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	18854	-	AK093906 AX748361 NM_152628	108806	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	180720	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr9	4077635	4077731	reg1024719.p2	5.893	+	TSC_hg19_v1_chr9_+_3526079 AK125504	-551595	+	TSC_hg19_v1_chr9_-_3525983 BC022191 NM_002919 NM_134428	-551679	-	TSC_hg19_v1_chr9_-_3525889 AK310956 AK289540	-551844	-	BC033899 NM_152629	74499	-	TSC_hg19_v1_chr9_-_4299574 DQ438882 DQ438887 DQ438892 DQ438899 DQ438902	221900	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	222280	-	BC022191|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_002919|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_134428|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK310956|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK289540|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##BC033899|GLIS3|169792|GLIS family zinc finger 3##NM_152629|GLIS3|169792|GLIS family zinc finger 3##DQ438882|GLIS3|169792|GLIS family zinc finger 3##DQ438887|GLIS3|169792|GLIS family zinc finger 3##DQ438892|GLIS3|169792|GLIS family zinc finger 3##DQ438899|GLIS3|169792|GLIS family zinc finger 3##DQ438902|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3	0.866637	CTCF.p2:4:0.867
chr12	121294910	121295037	reg1024694.p2	5.892	+	AK074916 TSC_hg19_v1_chr12_-_121248688	-46290	-	NM_000017 TSC_hg19_v1_chr12_+_121163641 BC025963 AK300645 M26393 DQ892184 DQ895378 CU693082 AB527081	-131344	+	TSC_hg19_v1_chr12_+_121148260 AK126367 BC070088	-146700	+	AY169313 TSC_hg19_v1_chr12_-_121341927 BC073910 AK291161	46991	-	TSC_hg19_v1_chr12_-_121342070 AK223590 NM_139015	47161	-	TSC_hg19_v1_chr12_+_121416378 X71346 HM116541 HM116542 HM116543 HM116544 HM116545 HM116546 HM116547 HM116548 HM116549 HM116550 HM116551 X71347 HM116552 HM116557 HM116558 HM116559 HM116560 HM116561 HM116562 HM116563 AK298422	121424	+	AK074916|SPPL3|121665|signal peptide peptidase-like 3##NM_000017|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##BC025963|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AK300645|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##M26393|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##DQ892184|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##DQ895378|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AB527081|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AK126367|UNC119B|84747|unc-119 homolog B (C. elegans)##BC070088|UNC119B|84747|unc-119 homolog B (C. elegans)##AY169313|SPPL3|121665|signal peptide peptidase-like 3##BC073910|SPPL3|121665|signal peptide peptidase-like 3##AK291161|SPPL3|121665|signal peptide peptidase-like 3##AK223590|SPPL3|121665|signal peptide peptidase-like 3##NM_139015|SPPL3|121665|signal peptide peptidase-like 3##X71346|HNF1A|6927|HNF1 homeobox A##HM116541|HNF1A|6927|HNF1 homeobox A##HM116542|HNF1A|6927|HNF1 homeobox A##HM116543|HNF1A|6927|HNF1 homeobox A##HM116544|HNF1A|6927|HNF1 homeobox A##HM116545|HNF1A|6927|HNF1 homeobox A##HM116546|HNF1A|6927|HNF1 homeobox A##HM116547|HNF1A|6927|HNF1 homeobox A##HM116548|HNF1A|6927|HNF1 homeobox A##HM116549|HNF1A|6927|HNF1 homeobox A##X71347|HNF1A|6927|HNF1 homeobox A##HM116552|HNF1A|6927|HNF1 homeobox A##HM116557|HNF1A|6927|HNF1 homeobox A##HM116558|HNF1A|6927|HNF1 homeobox A##HM116559|HNF1A|6927|HNF1 homeobox A##HM116560|HNF1A|6927|HNF1 homeobox A##HM116561|HNF1A|6927|HNF1 homeobox A##HM116563|HNF1A|6927|HNF1 homeobox A##AK298422|HNF1A|6927|HNF1 homeobox A	0.0	
chr18	47388188	47388289	reg1022313.p1	5.892	+	TSC_hg19_v1_chr18_-_47376221 BC033527	-12049	-	TSC_hg19_v1_chr18_+_47340396 AK123464	-47847	+	TSC_hg19_v1_chr18_-_47340253 AK054673 NM_006111 AK314462	-47968	-	AB384567 AB032945 TSC_hg19_v1_chr18_-_47721518 AB290160 BC032511 NM_001080467	333134	-	AB527886 BC030606 NM_145020 AK302114	404594	-	AF078830 AF078831 AF078832 AF078833 EF488685 AB527669 NM_001204151	418135	-	BC033527|MYO5B|4645|myosin VB##AK054673|ACAA2|10449|acetyl-CoA acyltransferase 2##NM_006111|ACAA2|10449|acetyl-CoA acyltransferase 2##AK314462|ACAA2|10449|acetyl-CoA acyltransferase 2##AB032945|MYO5B|4645|myosin VB##AB290160|MYO5B|4645|myosin VB##BC032511|MYO5B|4645|myosin VB##NM_001080467|MYO5B|4645|myosin VB##BC030606|CCDC11|220136|coiled-coil domain containing 11##NM_145020|CCDC11|220136|coiled-coil domain containing 11##AK302114|CCDC11|220136|coiled-coil domain containing 11##AF078830|MBD1|4152|methyl-CpG binding domain protein 1##AF078831|MBD1|4152|methyl-CpG binding domain protein 1##AF078832|MBD1|4152|methyl-CpG binding domain protein 1##AF078833|MBD1|4152|methyl-CpG binding domain protein 1##EF488685|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204151|MBD1|4152|methyl-CpG binding domain protein 1	0.116768	
chr20	42583886	42584067	reg1024609.p1	5.892	+	NM_001098798	-9441	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	-39183	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	-40489	+	AL132999 TSC_hg19_v1_chr20_-_42815818 AK304863	231817	-	BC029957 NM_020433 NM_175913	232241	-	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	255380	-	NM_001098798|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##AL132999|JPH2|57158|junctophilin 2##AK304863|JPH2|57158|junctophilin 2##BC029957|JPH2|57158|junctophilin 2##NM_020433|JPH2|57158|junctophilin 2##NM_175913|JPH2|57158|junctophilin 2##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111	0.0	
chr10	121367973	121368071	reg1024820.p2	5.891	+	TSC_hg19_v1_chr10_-_121356537 BC030025 NM_001033925 NM_003252	-11470	-	TSC_hg19_v1_chr10_-_121356475 AL833106 AK290695	-11522	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	-11914	-	TSC_hg19_v1_chr10_+_121410858 AF071218 AF095193 NM_004281	42798	+	AK222800 TSC_hg19_v1_chr10_+_121410891 BC006418 AF127139	42891	+	AK313026 TSC_hg19_v1_chr10_+_121410937	42914	+	BC030025|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##NM_001033925|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##NM_003252|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AL833106|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290695|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AF071218|BAG3|9531|BCL2-associated athanogene 3##AF095193|BAG3|9531|BCL2-associated athanogene 3##NM_004281|BAG3|9531|BCL2-associated athanogene 3##AK222800|BAG3|9531|BCL2-associated athanogene 3##BC006418|BAG3|9531|BCL2-associated athanogene 3##AF127139|BAG3|9531|BCL2-associated athanogene 3##AK313026|BAG3|9531|BCL2-associated athanogene 3	0.666643	CTCF.p2:1:0.667
chr12	112125175	112125311	reg1024311.p1	5.891	+	AK092356 AK310923 AX747497 TSC_hg19_v1_chr12_+_112123871 AL832043 BC015056 AY323912 BC126358	-1337	+	TSC_hg19_v1_chr12_+_112123859 NM_001136538 NM_025247	-1389	+	TSC_hg19_v1_chr12_-_112123771 NM_006768	-1447	-	NM_000690 NM_001204889 TSC_hg19_v1_chr12_+_112204694	79449	+	TSC_hg19_v1_chr12_+_112204765 AY621070 BC002967 X05409 AK223373 AK301375 Y00109 AK314856 BC071839 AB385105 CR456991 CU678320	79505	+	TSC_hg19_v1_chr12_-_112279735 BC071748 BC007973 BC015633 BC032560 AK124158 BC107695	154489	-	AK092356|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AK310923|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AL832043|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC015056|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AY323912|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC126358|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##NM_001136538|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##NM_025247|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##NM_006768|BRAP|8315|BRCA1 associated protein##NM_000690|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##NM_001204889|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC007973|C12orf47|51275|chromosome 12 open reading frame 47##BC015633|C12orf47|51275|chromosome 12 open reading frame 47##BC032560|C12orf47|51275|chromosome 12 open reading frame 47	0.747198	CTCF.p2:-9:0.747
chr19	3986316	3986410	reg1023780.p2	5.891	+	AK297398 AK298498 NM_001961 TSC_hg19_v1_chr19_-_3985462	-901	-	TSC_hg19_v1_chr19_-_3985455 BC126259 BC136313 BC068002 BC006547 AK299225	-962	-	TSC_hg19_v1_chr19_-_3984195 AB527843 AY942181 HQ258667 X51466 Z11692	-2112	-	TSC_hg19_v1_chr19_+_4007733 BC066895 AK022481 BC029874 NM_015897 AK222726 AB464092 AF077952 DQ892419 DQ895633 BC010047	21366	+	TSC_hg19_v1_chr19_-_4065504 BC084568	79133	-	BC113511 TSC_hg19_v1_chr19_-_4066828 AF000561 NM_015898 BC064505	80454	-	AK297398|EEF2|1938|eukaryotic translation elongation factor 2##AK298498|EEF2|1938|eukaryotic translation elongation factor 2##NM_001961|EEF2|1938|eukaryotic translation elongation factor 2##BC126259|EEF2|1938|eukaryotic translation elongation factor 2##BC136313|EEF2|1938|eukaryotic translation elongation factor 2##BC006547|EEF2|1938|eukaryotic translation elongation factor 2##AK299225|EEF2|1938|eukaryotic translation elongation factor 2##AY942181|EEF2|1938|eukaryotic translation elongation factor 2##HQ258667|EEF2|1938|eukaryotic translation elongation factor 2##X51466|EEF2|1938|eukaryotic translation elongation factor 2##Z11692|EEF2|1938|eukaryotic translation elongation factor 2##BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4##AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4##BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4##NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4##AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4##AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4##DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4##DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4##BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4##BC084568|ZBTB7A|51341|zinc finger and BTB domain containing 7A##BC113511|ZBTB7A|51341|zinc finger and BTB domain containing 7A##AF000561|ZBTB7A|51341|zinc finger and BTB domain containing 7A##NM_015898|ZBTB7A|51341|zinc finger and BTB domain containing 7A	0.153786	
chr21	35402605	35402756	reg1025056.p1	5.891	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-114588	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-212010	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-387825	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	43161	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	43249	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	333666	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.0	
chr22	18359748	18359929	reg1023813.p1	5.891	+	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-102504	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-102615	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	-102631	-	TSC_hg19_v1_chr22_-_18484268 AK127487	124390	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	147423	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	200850	+	BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26	0.0	
chr8	116140180	116140302	reg1024891.p2	5.891	+	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	-1691112	-	AB114605 NM_198124	-1750860	-	BC028739 AK313469 AF167082 NM_014379 AK297393	-5153275	-	TSC_hg19_v1_chr8_-_116680208 AK304046	539979	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	540924	-	TSC_hg19_v1_chr8_-_116681365 AF183810	541094	-	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I	0.104471	
chr16	84771929	84772051	reg1009496.p1	5.890	+	TSC_hg19_v1_chr16_+_84733611 AL162049 BX537402 D80012	-38360	+	TSC_hg19_v1_chr16_+_84733609 AK293304 AK299618	-38383	+	TSC_hg19_v1_chr16_+_84733603 AK315570 CR749515	-38390	+	TSC_hg19_v1_chr16_+_84853586 NM_031476 AY358790 AK303887 AK308396 AY358413 BC063012 BC007689 AL136861 AK027395	81613	+	TSC_hg19_v1_chr16_-_85045098 AK225768	273103	-	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	273139	-	AL162049|USP10|9100|ubiquitin specific peptidase 10##BX537402|USP10|9100|ubiquitin specific peptidase 10##D80012|USP10|9100|ubiquitin specific peptidase 10##AK293304|USP10|9100|ubiquitin specific peptidase 10##AK299618|USP10|9100|ubiquitin specific peptidase 10##AK315570|USP10|9100|ubiquitin specific peptidase 10##CR749515|USP10|9100|ubiquitin specific peptidase 10##NM_031476|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AY358790|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK303887|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK308396|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC063012|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC007689|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AL136861|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK027395|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK225768|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7	0.918893	CTCF.p2:-13:0.919
chr21	42505952	42506119	reg1023470.p2	5.890	+	AF023450 NM_001389 AF217525	-286984	-	AB384859 AB209136 TSC_hg19_v1_chr21_-_42218650	-287417	-	NM_006198 U52969 AK289964 BC013791 X93349 AF416716 AM183336	-1266658	+	AF178532 AF188276 AF188277 NM_012105 NM_138991 NM_138992	33692	+	AK075539 AK292056 AF050171 TSC_hg19_v1_chr21_+_42540086	34035	+	TSC_hg19_v1_chr21_+_42540092 AY358927 AF117892 BC014453 AF204944 AF200192 AB590241 DQ895416 EU176330 AF200342	34106	+	AF023450|DSCAM|1826|Down syndrome cell adhesion molecule##NM_001389|DSCAM|1826|Down syndrome cell adhesion molecule##AF217525|DSCAM|1826|Down syndrome cell adhesion molecule##AB209136|DSCAM|1826|Down syndrome cell adhesion molecule##NM_006198|PCP4|5121|Purkinje cell protein 4##U52969|PCP4|5121|Purkinje cell protein 4##AK289964|PCP4|5121|Purkinje cell protein 4##BC013791|PCP4|5121|Purkinje cell protein 4##X93349|PCP4|5121|Purkinje cell protein 4##AF416716|PCP4|5121|Purkinje cell protein 4##AM183336|PCP4|5121|Purkinje cell protein 4##AF178532|BACE2|25825|beta-site APP-cleaving enzyme 2##AF188276|BACE2|25825|beta-site APP-cleaving enzyme 2##AF188277|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_012105|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_138991|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_138992|BACE2|25825|beta-site APP-cleaving enzyme 2##AK075539|BACE2|25825|beta-site APP-cleaving enzyme 2##AK292056|BACE2|25825|beta-site APP-cleaving enzyme 2##AF050171|BACE2|25825|beta-site APP-cleaving enzyme 2##AY358927|BACE2|25825|beta-site APP-cleaving enzyme 2##AF117892|BACE2|25825|beta-site APP-cleaving enzyme 2##BC014453|BACE2|25825|beta-site APP-cleaving enzyme 2##AF204944|BACE2|25825|beta-site APP-cleaving enzyme 2##AF200192|BACE2|25825|beta-site APP-cleaving enzyme 2##DQ895416|BACE2|25825|beta-site APP-cleaving enzyme 2##EU176330|BACE2|25825|beta-site APP-cleaving enzyme 2##AF200342|BACE2|25825|beta-site APP-cleaving enzyme 2	0.994423	CTCF.p2:12:0.994
chr5	86526950	86527130	reg1018296.p1	5.890	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	-613223	+	TSC_hg19_v1_chr5_+_85913757 AK026505	-613282	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-2846376	-	TSC_hg19_v1_chr5_+_86563706 CR749722	36645	+	TSC_hg19_v1_chr5_+_86563831 BC131816	36786	+	TSC_hg19_v1_chr5_+_86564085 AB209106 NM_002890 BC033015	37026	+	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.0	
chr8	124835767	124835874	reg1023194.p2	5.890	+	TSC_hg19_v1_chr8_+_124780758 DQ228141 NM_144963 BC144630	-55007	+	TSC_hg19_v1_chr8_+_124780681 AK300603 BC030520	-55130	+	CR541838 BC125158 AJ306450 Z11502 NM_001003954 NM_004306 AK290281 AK223374	-86201	-	AB196633 NM_001039112	28406	+	BC101502 BC101506 AK057332 TSC_hg19_v1_chr8_-_125183771	347918	-	TSC_hg19_v1_chr8_-_125384925 BC041379 NM_194291	549132	-	DQ228141|FAM91A1|157769|family with sequence similarity 91, member A1##NM_144963|FAM91A1|157769|family with sequence similarity 91, member A1##BC144630|FAM91A1|157769|family with sequence similarity 91, member A1##AK300603|FAM91A1|157769|family with sequence similarity 91, member A1##BC030520|FAM91A1|157769|family with sequence similarity 91, member A1##CR541838|ANXA13|312|annexin A13##BC125158|ANXA13|312|annexin A13##AJ306450|ANXA13|312|annexin A13##Z11502|ANXA13|312|annexin A13##NM_001003954|ANXA13|312|annexin A13##NM_004306|ANXA13|312|annexin A13##AK290281|ANXA13|312|annexin A13##AK223374|ANXA13|312|annexin A13##AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)##BC101502|C8orf78|157376|chromosome 8 open reading frame 78##BC101506|C8orf78|157376|chromosome 8 open reading frame 78##AK057332|C8orf78|157376|chromosome 8 open reading frame 78##BC041379|TMEM65|157378|transmembrane protein 65##NM_194291|TMEM65|157378|transmembrane protein 65	0.584069	CTCF.p2:8:0.584
chrX	8939302	8939421	reg1019583.p1	5.890	+	BC113449 BC143805 NM_001171186 BC112022 AF494343 NM_174951	-169961	-	TSC_hg19_v1_chrX_-_8700193 BC137426 BC137427 M97252 NM_000216 S60085	-239154	-	X60299 TSC_hg19_v1_chrX_-_8700155	-239218	-	BC120955 BC120956 NM_205849	61741	-	TSC_hg19_v1_chrX_+_9431357 AK289409 NM_001139466 NM_001139467 NM_001139468 AK290962 BC032708	491986	+	TSC_hg19_v1_chrX_+_9433108 Y12781 BC052304 NM_005647	493873	+	BC113449|FAM9A|171482|family with sequence similarity 9, member A##BC143805|FAM9A|171482|family with sequence similarity 9, member A##NM_001171186|FAM9A|171482|family with sequence similarity 9, member A##BC112022|FAM9A|171482|family with sequence similarity 9, member A##AF494343|FAM9A|171482|family with sequence similarity 9, member A##NM_174951|FAM9A|171482|family with sequence similarity 9, member A##BC137426|KAL1|3730|Kallmann syndrome 1 sequence##BC137427|KAL1|3730|Kallmann syndrome 1 sequence##M97252|KAL1|3730|Kallmann syndrome 1 sequence##NM_000216|KAL1|3730|Kallmann syndrome 1 sequence##S60085|KAL1|3730|Kallmann syndrome 1 sequence##X60299|KAL1|3730|Kallmann syndrome 1 sequence##BC120955|FAM9B|171483|family with sequence similarity 9, member B##BC120956|FAM9B|171483|family with sequence similarity 9, member B##NM_205849|FAM9B|171483|family with sequence similarity 9, member B##AK289409|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139466|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139467|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139468|TBL1X|6907|transducin (beta)-like 1X-linked##AK290962|TBL1X|6907|transducin (beta)-like 1X-linked##BC032708|TBL1X|6907|transducin (beta)-like 1X-linked##Y12781|TBL1X|6907|transducin (beta)-like 1X-linked##BC052304|TBL1X|6907|transducin (beta)-like 1X-linked##NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked	0.918724	CTCF.p2:-4:0.919
chr12	2922876	2922987	reg1022422.p1	5.889	+	NM_018463 TSC_hg19_v1_chr12_+_2921842 AK130319 AK297189 AK291110 AK300905 AK027483 BC006552 BC013399 DQ892711 DQ895963 CU675449 AY599883	-1075	+	TSC_hg19_v1_chr12_+_2904310 AB385011 CU674888 DQ893668 DQ895800	-18629	+	TSC_hg19_v1_chr12_+_2904161 NM_002014 AK313918 BC001786 M88279 BC007924	-18777	+	AB528149 AM393084 BC131562 AL136557 AK300944 BC036063 AK098063 NM_031474	21253	-	TSC_hg19_v1_chr12_-_2986289 U83113 U74613 U74612 AK313845 BC006192 BC006529 AK291206	63265	-	TSC_hg19_v1_chr12_+_2986385 NM_001252499 NM_001252500 AB073599 AK021945 AK299990 AK304613 AK315364 BC005106	63458	+	NM_018463|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK130319|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK297189|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK291110|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK300905|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK027483|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC006552|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC013399|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ892711|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ895963|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AY599883|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ893668|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ895800|FKBP4|2288|FK506 binding protein 4, 59kDa##NM_002014|FKBP4|2288|FK506 binding protein 4, 59kDa##AK313918|FKBP4|2288|FK506 binding protein 4, 59kDa##BC001786|FKBP4|2288|FK506 binding protein 4, 59kDa##M88279|FKBP4|2288|FK506 binding protein 4, 59kDa##BC007924|FKBP4|2288|FK506 binding protein 4, 59kDa##AM393084|NRIP2|83714|nuclear receptor interacting protein 2##BC131562|NRIP2|83714|nuclear receptor interacting protein 2##AL136557|NRIP2|83714|nuclear receptor interacting protein 2##AK300944|NRIP2|83714|nuclear receptor interacting protein 2##BC036063|NRIP2|83714|nuclear receptor interacting protein 2##AK098063|NRIP2|83714|nuclear receptor interacting protein 2##NM_031474|NRIP2|83714|nuclear receptor interacting protein 2##U83113|FOXM1|2305|forkhead box M1##U74613|FOXM1|2305|forkhead box M1##U74612|FOXM1|2305|forkhead box M1##AK313845|FOXM1|2305|forkhead box M1##BC006192|FOXM1|2305|forkhead box M1##BC006529|FOXM1|2305|forkhead box M1##AK291206|FOXM1|2305|forkhead box M1##NM_001252499|C12orf32|83695|chromosome 12 open reading frame 32##NM_001252500|C12orf32|83695|chromosome 12 open reading frame 32##AB073599|C12orf32|83695|chromosome 12 open reading frame 32##AK021945|C12orf32|83695|chromosome 12 open reading frame 32##AK304613|C12orf32|83695|chromosome 12 open reading frame 32##AK315364|C12orf32|83695|chromosome 12 open reading frame 32##BC005106|C12orf32|83695|chromosome 12 open reading frame 32	0.438903	CTCF.p2:8:0.439
chr2	153611668	153611796	reg1022335.p1	5.889	+	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-36588	+	BC028741 TSC_hg19_v1_chr2_+_153575133	-36601	+	TSC_hg19_v1_chr2_+_153575123 AK315657	-36617	+	AK311958 BC002908 AK074808 AB043585 NM_019845	723519	-	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	1116712	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	1943457	+	BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##BC028741|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK315657|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	0.830069	CTCF.p2:-40:0.830
chr11	113458068	113458163	reg1021176.p1	5.888	+	S69899 BC021195 NM_000795 NM_016574 M30625	-112140	-	AJ541797 NM_178510 AF487542	-199556	+	NM_017868 AK023921 TSC_hg19_v1_chr11_+_113185315 AK292331 AK091887 BC011546 BC019086 BC032355	-272825	+	AK295366 BC047222 AK294313 BC028065 BC121802 BC121803 NM_030770 TSC_hg19_v1_chr11_-_113577091 AB028140	118943	-	TSC_hg19_v1_chr11_-_113644415 U54996 BC128264	186296	-	TSC_hg19_v1_chr11_-_113644447 AK300746 AK312925	186335	-	S69899|DRD2|1813|dopamine receptor D2##BC021195|DRD2|1813|dopamine receptor D2##NM_000795|DRD2|1813|dopamine receptor D2##NM_016574|DRD2|1813|dopamine receptor D2##M30625|DRD2|1813|dopamine receptor D2##AJ541797|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_178510|ANKK1|255239|ankyrin repeat and kinase domain containing 1##AF487542|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_017868|TTC12|54970|tetratricopeptide repeat domain 12##AK023921|TTC12|54970|tetratricopeptide repeat domain 12##AK292331|TTC12|54970|tetratricopeptide repeat domain 12##AK091887|TTC12|54970|tetratricopeptide repeat domain 12##BC011546|TTC12|54970|tetratricopeptide repeat domain 12##BC019086|TTC12|54970|tetratricopeptide repeat domain 12##BC032355|TTC12|54970|tetratricopeptide repeat domain 12##AK295366|TMPRSS5|80975|transmembrane protease, serine 5##BC047222|TMPRSS5|80975|transmembrane protease, serine 5##AK294313|TMPRSS5|80975|transmembrane protease, serine 5##BC028065|TMPRSS5|80975|transmembrane protease, serine 5##BC121802|TMPRSS5|80975|transmembrane protease, serine 5##BC121803|TMPRSS5|80975|transmembrane protease, serine 5##NM_030770|TMPRSS5|80975|transmembrane protease, serine 5##AB028140|TMPRSS5|80975|transmembrane protease, serine 5##U54996|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##BC128264|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AK300746|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AK312925|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)	0.0	
chr15	65370344	65370481	reg1021492.p1	5.888	+	NM_001101362	-1259	+	BC053734 TSC_hg19_v1_chr15_-_65360332 NM_016563	-10070	-	CU691030 AK314914 AK296261 TSC_hg19_v1_chr15_-_65360286 AF233588	-10181	-	BC127916 NM_001163692	28225	-	BT007395 BC016992 TSC_hg19_v1_chr15_-_65412291	41821	-	TSC_hg19_v1_chr15_-_65426147 AK225816 AK303203 BC131704 AK096970 BC092464 NM_005707	55518	-	NM_001101362|KBTBD13|390594|kelch repeat and BTB (POZ) domain containing 13##BC053734|RASL12|51285|RAS-like, family 12##NM_016563|RASL12|51285|RAS-like, family 12##AK314914|RASL12|51285|RAS-like, family 12##AK296261|RASL12|51285|RAS-like, family 12##AF233588|RASL12|51285|RAS-like, family 12##BC127916|UBAP1L|390595|ubiquitin associated protein 1-like##NM_001163692|UBAP1L|390595|ubiquitin associated protein 1-like##BT007395|PDCD7|10081|programmed cell death 7##BC016992|PDCD7|10081|programmed cell death 7##AK225816|PDCD7|10081|programmed cell death 7##AK303203|PDCD7|10081|programmed cell death 7##BC131704|PDCD7|10081|programmed cell death 7##AK096970|PDCD7|10081|programmed cell death 7##BC092464|PDCD7|10081|programmed cell death 7##NM_005707|PDCD7|10081|programmed cell death 7	0.456063	CTCF.p2:1:0.456
chr10	5882324	5882505	reg1024411.p1	5.887	+	TSC_hg19_v1_chr10_-_5855394 Y13286 AK297177 AK297554 AK312485 NM_001115156 NM_001494	-26979	-	BX648038 AB451295 AB451429 BT006868 CR457073 D13988 DQ890573 DQ893733 BC005145 TSC_hg19_v1_chr10_-_5855330 AK309360	-27148	-	TSC_hg19_v1_chr10_+_5772610 AB095927	-109742	+	TSC_hg19_v1_chr10_-_5931834 BC067892 NM_001009941 NM_001009943 NM_019046	49442	-	TSC_hg19_v1_chr10_+_5932205 AK095343	49785	+	TSC_hg19_v1_chr10_+_5932214 NM_178150	49797	+	Y13286|GDI2|2665|GDP dissociation inhibitor 2##AK297177|GDI2|2665|GDP dissociation inhibitor 2##AK297554|GDI2|2665|GDP dissociation inhibitor 2##AK312485|GDI2|2665|GDP dissociation inhibitor 2##NM_001115156|GDI2|2665|GDP dissociation inhibitor 2##NM_001494|GDI2|2665|GDP dissociation inhibitor 2##BX648038|GDI2|2665|GDP dissociation inhibitor 2##AB451295|GDI2|2665|GDP dissociation inhibitor 2##AB451429|GDI2|2665|GDP dissociation inhibitor 2##BT006868|GDI2|2665|GDP dissociation inhibitor 2##CR457073|GDI2|2665|GDP dissociation inhibitor 2##D13988|GDI2|2665|GDP dissociation inhibitor 2##DQ890573|GDI2|2665|GDP dissociation inhibitor 2##DQ893733|GDI2|2665|GDP dissociation inhibitor 2##BC005145|GDI2|2665|GDP dissociation inhibitor 2##AK309360|GDI2|2665|GDP dissociation inhibitor 2##AB095927|FAM208B|54906|family with sequence similarity 208, member B##BC067892|ANKRD16|54522|ankyrin repeat domain 16##NM_001009941|ANKRD16|54522|ankyrin repeat domain 16##NM_001009943|ANKRD16|54522|ankyrin repeat domain 16##NM_019046|ANKRD16|54522|ankyrin repeat domain 16##AK095343|FBXO18|84893|F-box protein, helicase, 18##NM_178150|FBXO18|84893|F-box protein, helicase, 18	0.0	
chr18	13567462	13567642	reg1021292.p2	5.887	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-348767	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-576207	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-619488	+	NM_001003674 NM_001003675	44112	+	AF009426 AF009427 NM_004338 NM_181483	53314	+	TSC_hg19_v1_chr18_-_13726549 AK055618	158954	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.0	
chr2	176953141	176953265	reg1024039.p2	5.887	+	NM_001080458	-4514	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	-86228	-	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	-906899	-	TSC_hg19_v1_chr2_+_176957451 NM_000523 AB463753	4341	+	BC069088 BC121103 BC121104 NM_021193	11326	+	TSC_hg19_v1_chr2_+_176969236 AK309681	16038	+	NM_001080458|EVX2|344191|even-skipped homeobox 2##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715##CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_000523|HOXD13|3239|homeobox D13##BC069088|HOXD12|3238|homeobox D12##BC121103|HOXD12|3238|homeobox D12##BC121104|HOXD12|3238|homeobox D12##NM_021193|HOXD12|3238|homeobox D12	0.0	
chr6	74679820	74679950	reg1028451.p1	5.887	+	TSC_hg19_v1_chr6_+_74406033 AY149920	-273861	+	EF553520 TSC_hg19_v1_chr6_+_74405925 AY788891 BX641095	-273965	+	TSC_hg19_v1_chr6_+_74405882 AK095888	-274014	+	BC146868 U73778 NM_004370 NM_080645 TSC_hg19_v1_chr6_-_75915745	1235770	-	TSC_hg19_v1_chr6_-_75915768 AK307558	1235895	-	CR407646 CR542125 X15822 TSC_hg19_v1_chr6_-_75953494 BC101826 BC101828 AK312154	1273594	-	AY149920|CD109|135228|CD109 molecule##EF553520|CD109|135228|CD109 molecule##AY788891|CD109|135228|CD109 molecule##BX641095|CD109|135228|CD109 molecule##AK095888|CD109|135228|CD109 molecule##BC146868|COL12A1|1303|collagen, type XII, alpha 1##U73778|COL12A1|1303|collagen, type XII, alpha 1##NM_004370|COL12A1|1303|collagen, type XII, alpha 1##NM_080645|COL12A1|1303|collagen, type XII, alpha 1##AK307558|COL12A1|1303|collagen, type XII, alpha 1##CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	0.981531	CTCF.p2:6:0.982
chr8	131449942	131450065	reg1025672.p2	5.887	+	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-421120	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-421309	-	BC016345 TSC_hg19_v1_chr8_-_131028667	-421344	-	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	6028	-	NM_001115	602831	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1466354	+	AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B##NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.0	
chr12	103273050	103273174	reg1019698.p1	5.886	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-398730	-	M11568 TSC_hg19_v1_chr12_-_102874344	-398770	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-398790	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	37854	-	TSC_hg19_v1_chr12_-_103311062 BC026251	37951	-	L47726 NM_000277 U49897	38268	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.697719	CTCF.p2:57:0.698
chr12	79568588	79568718	reg1023675.p1	5.886	+	CR627387 NM_001135806 AK308743	-129202	+	TSC_hg19_v1_chr12_+_79258794 BC058917	-309836	+	TSC_hg19_v1_chr12_+_79258597 BC041373	-310061	+	AB590922 CR536549 BC007018 TSC_hg19_v1_chr12_-_80084318	515562	-	U63809 TSC_hg19_v1_chr12_-_80084784 NM_002583	516112	-	AK302692 NM_001143886	739037	-	CR627387|SYT1|6857|synaptotagmin I##NM_001135806|SYT1|6857|synaptotagmin I##AK308743|SYT1|6857|synaptotagmin I##BC058917|SYT1|6857|synaptotagmin I##BC041373|SYT1|6857|synaptotagmin I##CR536549|PAWR|5074|PRKC, apoptosis, WT1, regulator##BC007018|PAWR|5074|PRKC, apoptosis, WT1, regulator##U63809|PAWR|5074|PRKC, apoptosis, WT1, regulator##NM_002583|PAWR|5074|PRKC, apoptosis, WT1, regulator##AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	0.587681	CTCF.p2:28:0.588
chr16	87911554	87911687	reg1022529.p1	5.886	+	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	-8545	-	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	-112050	-	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	-112105	-	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	58527	-	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	73548	+	AK315535 NM_001173542	81856	+	DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##BC001044|KLHDC4|54758|kelch domain containing 4##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein	0.998056	CTCF.p2:-8:0.979
chr20	52509913	52510094	reg1022757.p2	5.886	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-299204	-	AF041259 NM_006526	-310368	-	AK302570 NM_001193421	-708182	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	177059	-	AK315220 NM_003657	177300	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	280517	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr4	18077519	18077667	reg1021208.p1	5.886	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-54127	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-264982	+	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	-265320	-	AB017168 NM_004787 BC117190 BC143978 AF133270	2177743	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	2624474	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	2908036	-	AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16##AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4	0.912257	CTCF.p2:0:0.912
chr6	42007356	42007536	reg1021337.p2	5.886	+	AB385206 CR542246 DQ891748 DQ895130 BC011616 M90814 TSC_hg19_v1_chr6_-_41909544 AK315421 AK299187 M92287 NM_001136125 NM_001760	-97947	-	TSC_hg19_v1_chr6_+_41889236 CU690756	-118179	+	TSC_hg19_v1_chr6_+_41889209 AK314147 BC007340	-118237	+	TSC_hg19_v1_chr6_-_42016453 AK303452 AB209825 AK057206 AK097856	8972	-	NM_001136017 NM_001136126	9163	-	BC033728 NM_138572 TSC_hg19_v1_chr6_+_42018261 AK057383 BC119678 BC119679 AL833401	10810	+	CR542246|CCND3|896|cyclin D3##DQ891748|CCND3|896|cyclin D3##DQ895130|CCND3|896|cyclin D3##BC011616|CCND3|896|cyclin D3##M90814|CCND3|896|cyclin D3##AK315421|CCND3|896|cyclin D3##AK299187|CCND3|896|cyclin D3##M92287|CCND3|896|cyclin D3##NM_001136125|CCND3|896|cyclin D3##NM_001760|CCND3|896|cyclin D3##AK314147|BYSL|705|bystin-like##BC007340|BYSL|705|bystin-like##AK303452|CCND3|896|cyclin D3##AB209825|CCND3|896|cyclin D3##AK057206|CCND3|896|cyclin D3##AK097856|CCND3|896|cyclin D3##NM_001136017|CCND3|896|cyclin D3##NM_001136126|CCND3|896|cyclin D3##BC033728|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##NM_138572|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AK057383|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119678|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119679|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AL833401|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa	0.0	
chr7	151451302	151451408	reg1020384.p1	5.886	+	TSC_hg19_v1_chr7_-_151329284 BT007127 BC020540 AB025580 AF087875 AK314646 AK001887 NM_024429	-122075	-	TSC_hg19_v1_chr7_-_151216982 BC107705 AK125446 BC016155 NM_005614	-234370	-	TSC_hg19_v1_chr7_-_151216769 BC066307	-234586	-	BC068598 TSC_hg19_v1_chr7_-_151511929 NM_001040633	60585	-	AK074675 NM_016203	122907	-	NM_145292 AF440404 AK315667 AK093091 AX747915 BC022021 AF440400 BC025391	202143	+	BT007127|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC020540|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AB025580|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AF087875|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK314646|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK001887|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_024429|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC107705|RHEB|6009|Ras homolog enriched in brain##AK125446|RHEB|6009|Ras homolog enriched in brain##BC016155|RHEB|6009|Ras homolog enriched in brain##NM_005614|RHEB|6009|Ras homolog enriched in brain##BC066307|RHEB|6009|Ras homolog enriched in brain##BC068598|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_001040633|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK074675|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_016203|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_145292|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440404|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK315667|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK093091|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC022021|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440400|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC025391|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	0.579888	CTCF.p2:-2:0.580
chr9	131495587	131495675	reg1017742.p1	5.886	+	CU690564 BC009280 BC048251 TSC_hg19_v1_chr9_-_131486407 AK027430 AK075332 AK315746 AK092843 AX747760 NM_032799	-9242	-	TSC_hg19_v1_chr9_+_131465139 BC032794 BC041581 BC062558 EU831416 EU831509	-30531	+	TSC_hg19_v1_chr9_+_131464821 BC023327 NM_013355	-30788	+	TSC_hg19_v1_chr9_-_131534148 AK314911 BC033884	38386	-	TSC_hg19_v1_chr9_-_131534207 BC052563 NM_006336	38627	-	NM_018201 TSC_hg19_v1_chr9_+_131549531	53889	+	BC009280|ZDHHC12|84885|zinc finger, DHHC-type containing 12##BC048251|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK027430|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK075332|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK315746|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK092843|ZDHHC12|84885|zinc finger, DHHC-type containing 12##NM_032799|ZDHHC12|84885|zinc finger, DHHC-type containing 12##BC032794|PKN3|29941|protein kinase N3##BC041581|PKN3|29941|protein kinase N3##BC062558|PKN3|29941|protein kinase N3##EU831416|PKN3|29941|protein kinase N3##EU831509|PKN3|29941|protein kinase N3##BC023327|PKN3|29941|protein kinase N3##NM_013355|PKN3|29941|protein kinase N3##AK314911|ZER1|10444|zer-1 homolog (C. elegans)##BC033884|ZER1|10444|zer-1 homolog (C. elegans)##BC052563|ZER1|10444|zer-1 homolog (C. elegans)##NM_006336|ZER1|10444|zer-1 homolog (C. elegans)##NM_018201|TBC1D13|54662|TBC1 domain family, member 13	0.993932	CTCF.p2:3:0.994
chr11	64420531	64420698	reg1004600.p1	5.885	+	TSC_hg19_v1_chr11_-_64410785 NM_138734	-9823	-	BC043422 TSC_hg19_v1_chr11_-_64377473	-43212	-	AB050269 NM_144585 NM_153378	-62333	+	TSC_hg19_v1_chr11_-_64490666 AB023138 BC150275 NM_015080 NM_138732	70051	-	HQ258466 AB590919 TSC_hg19_v1_chr11_-_64510439	89782	-	TSC_hg19_v1_chr11_-_64510461 AK314637	89854	-	NM_138734|NRXN2|9379|neurexin 2##AB050269|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_144585|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_153378|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##AB023138|NRXN2|9379|neurexin 2##BC150275|NRXN2|9379|neurexin 2##NM_015080|NRXN2|9379|neurexin 2##NM_138732|NRXN2|9379|neurexin 2##HQ258466|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AK314637|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)	0.0	
chr11	81940487	81940617	reg1026473.p1	5.885	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-2788828	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-3654657	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-3654760	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	504346	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	670965	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	672222	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.190007	
chr16	11277154	11277335	reg1021264.p2	5.885	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-238801	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-241009	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-241078	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	72806	-	X63758 BC096135 BC096136 BC096137 NM_005425	85894	-	NM_021247	90207	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.052878	
chr2	26692072	26692216	reg1022490.p1	5.885	+	TSC_hg19_v1_chr2_+_26624787 AK057222 NM_145038 AK289953 AK307094	-67347	+	AK122995 AY358172 NM_153835	-122497	-	AB051511 TSC_hg19_v1_chr2_+_26569010 AB621826 BC021229 BC015430 CU676884	-123099	+	AF107403 AF183186 AF183187 NM_004802 NM_194322 NM_194323	8765	-	AF183185 NM_194248	89421	-	TSC_hg19_v1_chr2_+_26785463 NM_001105519	93324	+	AK057222|CCDC164|92749|coiled-coil domain containing 164##NM_145038|CCDC164|92749|coiled-coil domain containing 164##AK289953|CCDC164|92749|coiled-coil domain containing 164##AK307094|CCDC164|92749|coiled-coil domain containing 164##AK122995|GPR113|165082|G protein-coupled receptor 113##AY358172|GPR113|165082|G protein-coupled receptor 113##NM_153835|GPR113|165082|G protein-coupled receptor 113##AB051511|EPT1|85465|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)##BC021229|EPT1|85465|ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)##AF107403|OTOF|9381|otoferlin##AF183186|OTOF|9381|otoferlin##AF183187|OTOF|9381|otoferlin##NM_004802|OTOF|9381|otoferlin##NM_194322|OTOF|9381|otoferlin##NM_194323|OTOF|9381|otoferlin##AF183185|OTOF|9381|otoferlin##NM_194248|OTOF|9381|otoferlin##NM_001105519|C2orf70|339778|chromosome 2 open reading frame 70	0.999744	CTCF.p2:12:0.986
chr3	129035546	129035677	reg1024298.p2	5.885	+	TSC_hg19_v1_chr3_-_129035130 BC000426 NM_006026	-511	-	TSC_hg19_v1_chr3_+_128997745 BC010125 BC050686 NM_001006109 BC009993	-37799	+	TSC_hg19_v1_chr3_+_128997674 AF201934 NM_020187 BC088363 AK297501 AK309891 AK225264	-37949	+	TSC_hg19_v1_chr3_-_129118263 BC053996 AK093477	82652	-	CU688234 AK127968 BC031104 BC066975 NM_207307	111801	-	AM180876 CR450305 CU680042 BC034463 U56254 U56428 TSC_hg19_v1_chr3_-_129158722 BC011752	123107	-	BC000426|H1FX|8971|H1 histone family, member X##NM_006026|H1FX|8971|H1 histone family, member X##BC010125|C3orf37|56941|chromosome 3 open reading frame 37##BC050686|C3orf37|56941|chromosome 3 open reading frame 37##NM_001006109|C3orf37|56941|chromosome 3 open reading frame 37##BC009993|C3orf37|56941|chromosome 3 open reading frame 37##AF201934|C3orf37|56941|chromosome 3 open reading frame 37##NM_020187|C3orf37|56941|chromosome 3 open reading frame 37##BC088363|C3orf37|56941|chromosome 3 open reading frame 37##AK297501|C3orf37|56941|chromosome 3 open reading frame 37##AK309891|C3orf37|56941|chromosome 3 open reading frame 37##AK225264|C3orf37|56941|chromosome 3 open reading frame 37##BC053996|RPL32P3|132241|ribosomal protein L32 pseudogene 3##AK093477|RPL32P3|132241|ribosomal protein L32 pseudogene 3##AK127968|C3orf25|90288|chromosome 3 open reading frame 25##BC031104|C3orf25|90288|chromosome 3 open reading frame 25##BC066975|C3orf25|90288|chromosome 3 open reading frame 25##NM_207307|C3orf25|90288|chromosome 3 open reading frame 25##AM180876|MBD4|8930|methyl-CpG binding domain protein 4##CR450305|MBD4|8930|methyl-CpG binding domain protein 4##BC034463|MBD4|8930|methyl-CpG binding domain protein 4##BC011752|MBD4|8930|methyl-CpG binding domain protein 4	0.234439	CTCF.p2:-19:0.234
chr8	8058763	8058873	reg1026395.p1	5.884	+	AK292586 NM_001193630	-274960	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-306614	+	AF295370 AJ237673 NM_018661 AB037972 AB590071 AF217245 AF516673	-319893	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	27324	+	TSC_hg19_v1_chr8_-_8175862 AF075060	117070	-	AK122582 NM_001080826	180404	-	AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF295370|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2	0.0	
chr13	74601028	74601175	reg1024839.p1	5.883	+	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-967897	+	TSC_hg19_v1_chr13_+_73356270 NM_006346 AK309828 BC006009 BC008432 BC041806 BC051911 AY370776 AY375528	-1244791	+	BC056143 TSC_hg19_v1_chr13_-_73356083 AK314715 BC038101 NM_001128226 NM_014953	-1244895	-	AF161471 AF113122 NM_007249	106888	-	TSC_hg19_v1_chr13_-_74708425 AK291397	107295	-	CR749622 TSC_hg19_v1_chr13_-_75901948	1300821	-	AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_006346|PIBF1|10464|progesterone immunomodulatory binding factor 1##AK309828|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC006009|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC008432|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC041806|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC051911|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY370776|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY375528|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC056143|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AK314715|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##BC038101|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_001128226|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_014953|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK291397|KLF12|11278|Kruppel-like factor 12##CR749622|TBC1D4|9882|TBC1 domain family, member 4	0.0	
chr19	36869734	36869839	reg1021685.p1	5.883	+	TSC_hg19_v1_chr19_-_36822604 BC041949	-47158	-	TSC_hg19_v1_chr19_+_36727378 AB464376 AK311486	-142434	+	AK313460 TSC_hg19_v1_chr19_+_36726957	-142866	+	TSC_hg19_v1_chr19_-_36870093 AK293103 NM_020917	306	-	TSC_hg19_v1_chr19_-_36909491 AK315709 GU388429 AL834267 NM_133466 AK074942	39735	-	AK027685 NM_032838 AK074497 TSC_hg19_v1_chr19_-_36980464 AK316262 AK299393 NM_001145343 NM_001145344 NM_001145345	110614	-	BC041949|LOC100506930|100506930|uncharacterized LOC100506930##AK311486|ZNF146|7705|zinc finger protein 146##AK313460|ZNF146|7705|zinc finger protein 146##AK293103|ZFP14|57677|zinc finger protein 14 homolog (mouse)##NM_020917|ZFP14|57677|zinc finger protein 14 homolog (mouse)##AK315709|ZFP82|284406|zinc finger protein 82 homolog (mouse)##GU388429|ZFP82|284406|zinc finger protein 82 homolog (mouse)##AL834267|ZFP82|284406|zinc finger protein 82 homolog (mouse)##NM_133466|ZFP82|284406|zinc finger protein 82 homolog (mouse)##AK074942|ZFP82|284406|zinc finger protein 82 homolog (mouse)##AK027685|ZNF566|84924|zinc finger protein 566##NM_032838|ZNF566|84924|zinc finger protein 566##AK074497|ZNF566|84924|zinc finger protein 566##AK316262|ZNF566|84924|zinc finger protein 566##AK299393|ZNF566|84924|zinc finger protein 566##NM_001145343|ZNF566|84924|zinc finger protein 566##NM_001145344|ZNF566|84924|zinc finger protein 566##NM_001145345|ZNF566|84924|zinc finger protein 566	0.0	
chr7	74058222	74058353	reg1024488.p2	5.883	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	-189852	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	-189979	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	-190123	+	AK292832 TSC_hg19_v1_chr7_+_74072028 AF015553 NM_001163636 NM_001518 NM_032999 NM_033000 NM_033001	13734	+	TSC_hg19_v1_chr7_+_74072046 BC070484	13757	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	13835	+	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AK292832|GTF2I|2969|general transcription factor IIi##AF015553|GTF2I|2969|general transcription factor IIi##NM_001163636|GTF2I|2969|general transcription factor IIi##NM_001518|GTF2I|2969|general transcription factor IIi##NM_032999|GTF2I|2969|general transcription factor IIi##NM_033000|GTF2I|2969|general transcription factor IIi##NM_033001|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi	0.0	
chr1	10970067	10970171	reg1021549.p1	5.882	+	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	-113414	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	-215568	-	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-435108	+	NM_001170754	71974	-	NM_007375 TSC_hg19_v1_chr1_+_11072715 AK299454 AK312416 BC001487 BC095435 BC071657 AL050265 AK222754 AK295920	102591	+	Y18282 TSC_hg19_v1_chr1_-_11107270 Y18283 X98400 Y09926 BC052299 BC067359 BC080556 Y18281 Y18284 AB008047	137100	-	DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127##NM_007375|TARDBP|23435|TAR DNA binding protein##AK299454|TARDBP|23435|TAR DNA binding protein##AK312416|TARDBP|23435|TAR DNA binding protein##BC001487|TARDBP|23435|TAR DNA binding protein##BC095435|TARDBP|23435|TAR DNA binding protein##BC071657|TARDBP|23435|TAR DNA binding protein##AL050265|TARDBP|23435|TAR DNA binding protein##AK222754|TARDBP|23435|TAR DNA binding protein##AK295920|TARDBP|23435|TAR DNA binding protein##Y18282|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18283|MASP2|10747|mannan-binding lectin serine peptidase 2##X98400|MASP2|10747|mannan-binding lectin serine peptidase 2##Y09926|MASP2|10747|mannan-binding lectin serine peptidase 2##BC052299|MASP2|10747|mannan-binding lectin serine peptidase 2##BC067359|MASP2|10747|mannan-binding lectin serine peptidase 2##BC080556|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18281|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18284|MASP2|10747|mannan-binding lectin serine peptidase 2##AB008047|MASP2|10747|mannan-binding lectin serine peptidase 2	0.98468	CTCF.p2:39:0.985
chr13	27913570	27913692	reg1019253.p2	5.882	+	TSC_hg19_v1_chr13_+_27844966 HQ258126	-68624	+	AY439004 NM_206827	-69168	+	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	-87889	+	BC143711 D32257 NM_002097 TSC_hg19_v1_chr13_+_27998761 AB590496 U14134 U20272	85140	+	TSC_hg19_v1_chr13_-_28024327 BC039599 NM_001166262 NM_001166261	110678	-	AF265440 TSC_hg19_v1_chr13_-_28024702 BC046166 NM_001166263 NM_152912	111091	-	HQ258126|RASL11A|387496|RAS-like, family 11, member A##AY439004|RASL11A|387496|RAS-like, family 11, member A##NM_206827|RASL11A|387496|RAS-like, family 11, member A##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21##BC143711|GTF3A|2971|general transcription factor IIIA##D32257|GTF3A|2971|general transcription factor IIIA##NM_002097|GTF3A|2971|general transcription factor IIIA##U14134|GTF3A|2971|general transcription factor IIIA##U20272|GTF3A|2971|general transcription factor IIIA##BC039599|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166262|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166261|MTIF3|219402|mitochondrial translational initiation factor 3##BC046166|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166263|MTIF3|219402|mitochondrial translational initiation factor 3##NM_152912|MTIF3|219402|mitochondrial translational initiation factor 3	0.0	
chr16	30103931	30104082	reg1021644.p3	5.882	+	BC026031 NM_004608 AK022330 TSC_hg19_v1_chr16_-_30103243	-759	-	TSC_hg19_v1_chr16_+_30087347 X70218 BC001416 AF097996 NM_002720	-16638	+	TSC_hg19_v1_chr16_+_30077158 BC012880 BC015888 AK301993	-26843	+	BC005009 TSC_hg19_v1_chr16_-_30107535 BC050664 NM_031477 AB098737 NM_001145524 AF305622 AK022409	3539	-	TSC_hg19_v1_chr16_+_30107748 AK095480 BC048809	3762	+	AK097453 TSC_hg19_v1_chr16_+_30108408	4397	+	BC026031|TBX6|6911|T-box 6##NM_004608|TBX6|6911|T-box 6##AK022330|TBX6|6911|T-box 6##X70218|PPP4C|5531|protein phosphatase 4, catalytic subunit##BC001416|PPP4C|5531|protein phosphatase 4, catalytic subunit##AF097996|PPP4C|5531|protein phosphatase 4, catalytic subunit##NM_002720|PPP4C|5531|protein phosphatase 4, catalytic subunit##BC012880|ALDOA|226|aldolase A, fructose-bisphosphate##BC015888|ALDOA|226|aldolase A, fructose-bisphosphate##AK301993|ALDOA|226|aldolase A, fructose-bisphosphate##BC005009|YPEL3|83719|yippee-like 3 (Drosophila)##BC050664|YPEL3|83719|yippee-like 3 (Drosophila)##NM_031477|YPEL3|83719|yippee-like 3 (Drosophila)##AB098737|YPEL3|83719|yippee-like 3 (Drosophila)##NM_001145524|YPEL3|83719|yippee-like 3 (Drosophila)##AF305622|YPEL3|83719|yippee-like 3 (Drosophila)##AK022409|YPEL3|83719|yippee-like 3 (Drosophila)	0.699831	CTCF.p2:-21:0.700
chr3	12851631	12851792	reg1024867.p2	5.882	+	GU727621 NM_001162499 NM_012298 BC136592 AB014567	-13505	+	AK001898 BC020658 AK092470 AX747561 NM_018306	-50938	-	TSC_hg19_v1_chr3_-_12705626 NM_002880	-146037	-	NM_001007074	30237	-	BC011514 BC070209 X03342 D28385 AK311909 TSC_hg19_v1_chr3_-_12883042 NM_000994 NM_001007073	31332	-	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	89897	-	GU727621|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_001162499|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_012298|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##BC136592|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##AB014567|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##AK001898|TMEM40|55287|transmembrane protein 40##BC020658|TMEM40|55287|transmembrane protein 40##AK092470|TMEM40|55287|transmembrane protein 40##NM_018306|TMEM40|55287|transmembrane protein 40##NM_002880|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##NM_001007074|RPL32|6161|ribosomal protein L32##BC011514|RPL32|6161|ribosomal protein L32##BC070209|RPL32|6161|ribosomal protein L32##X03342|RPL32|6161|ribosomal protein L32##D28385|RPL32|6161|ribosomal protein L32##AK311909|RPL32|6161|ribosomal protein L32##NM_000994|RPL32|6161|ribosomal protein L32##NM_001007073|RPL32|6161|ribosomal protein L32##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1	0.104992	
chr3	128594545	128594658	reg1023984.p1	5.882	+	TSC_hg19_v1_chr3_+_128532268 AF119891	-62266	+	TSC_hg19_v1_chr3_+_128445036 AK298344	-149564	+	TSC_hg19_v1_chr3_+_128445035 AK000826 AK308934 BC008721	-149567	+	NM_014049 TSC_hg19_v1_chr3_+_128598429	3780	+	TSC_hg19_v1_chr3_+_128598453 BC007970	3847	+	AK130311 TSC_hg19_v1_chr3_+_128598469 AK297952 AK310644	3863	+	AK298344|RAB7A|7879|RAB7A, member RAS oncogene family##AK000826|RAB7A|7879|RAB7A, member RAS oncogene family##AK308934|RAB7A|7879|RAB7A, member RAS oncogene family##BC008721|RAB7A|7879|RAB7A, member RAS oncogene family##NM_014049|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##BC007970|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK130311|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK297952|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##AK310644|ACAD9|28976|acyl-CoA dehydrogenase family, member 9	0.945678	CTCF.p2:-1:0.946
chr6_cox_hap2	3024177	3024318	reg1024348.p1	5.882	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.013387	
chr9	26656397	26656521	reg1028633.p1	5.882	+	AK131322 NM_001004352	-589787	+	NM_001004125	-977604	-	BC017510 TSC_hg19_v1_chr9_-_25678278 BC046919 AY168647 BC110824	-978126	-	AB590748 CU687198 BC071953 TSC_hg19_v1_chr9_-_26892779 AK023719 BC014658 NM_001167575 NM_024828	236310	-	EU176453 EU176795 AB385043 TSC_hg19_v1_chr9_-_26947158 BC032551 AK022761	290645	-	TSC_hg19_v1_chr9_-_26947165 AK001642	290709	-	AK131322|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004352|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004125|TUSC1|286319|tumor suppressor candidate 1##BC017510|TUSC1|286319|tumor suppressor candidate 1##BC046919|TUSC1|286319|tumor suppressor candidate 1##AY168647|TUSC1|286319|tumor suppressor candidate 1##BC110824|TUSC1|286319|tumor suppressor candidate 1##BC071953|C9orf82|79886|chromosome 9 open reading frame 82##AK023719|C9orf82|79886|chromosome 9 open reading frame 82##BC014658|C9orf82|79886|chromosome 9 open reading frame 82##NM_001167575|C9orf82|79886|chromosome 9 open reading frame 82##NM_024828|C9orf82|79886|chromosome 9 open reading frame 82##EU176453|PLAA|9373|phospholipase A2-activating protein##EU176795|PLAA|9373|phospholipase A2-activating protein##BC032551|PLAA|9373|phospholipase A2-activating protein##AK022761|PLAA|9373|phospholipase A2-activating protein##AK001642|PLAA|9373|phospholipase A2-activating protein	0.99856	CTCF.p2:-10:0.999
chr11	3346147	3346281	reg1025745.p1	5.881	+	AK293940 NM_001039165	-92599	-	AB529240 AY255583 NM_001164377	-106172	-	TSC_hg19_v1_chr11_-_3186559 NM_001144063 NM_020896 NM_145638	-159645	-	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	54165	-	NM_053017 NM_001079536 Y16835	317300	-	BC017828 BC069102 NM_004314 S74683 BC111729	320156	+	AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##NM_001144063|OSBPL5|114879|oxysterol binding protein-like 5##NM_020896|OSBPL5|114879|oxysterol binding protein-like 5##NM_145638|OSBPL5|114879|oxysterol binding protein-like 5##BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195##NM_053017|ART5|116969|ADP-ribosyltransferase 5##NM_001079536|ART5|116969|ADP-ribosyltransferase 5##Y16835|ART5|116969|ADP-ribosyltransferase 5##BC017828|ART1|417|ADP-ribosyltransferase 1##BC069102|ART1|417|ADP-ribosyltransferase 1##NM_004314|ART1|417|ADP-ribosyltransferase 1##S74683|ART1|417|ADP-ribosyltransferase 1##BC111729|ART1|417|ADP-ribosyltransferase 1	1.970903	CTCF.p2:-24:0.995	CTCF.p2:26:0.976
chr1	152717804	152717914	reg1024800.p1	5.881	+	NM_001024679	-25862	+	BC113446 BC113448 NM_178356 HQ258036	-36323	+	BC119707 BC127647 NM_178428	-47020	+	NM_001025231	12646	+	AB463827 NM_178354	30988	+	BC038391 NM_178353	40893	+	NM_001024679|C1orf68|100129271|chromosome 1 open reading frame 68##BC113446|LCE4A|199834|late cornified envelope 4A##BC113448|LCE4A|199834|late cornified envelope 4A##NM_178356|LCE4A|199834|late cornified envelope 4A##HQ258036|LCE4A|199834|late cornified envelope 4A##BC119707|LCE2A|353139|late cornified envelope 2A##BC127647|LCE2A|353139|late cornified envelope 2A##NM_178428|LCE2A|353139|late cornified envelope 2A##NM_001025231|KPRP|448834|keratinocyte proline-rich protein##AB463827|LCE1F|353137|late cornified envelope 1F##NM_178354|LCE1F|353137|late cornified envelope 1F##BC038391|LCE1E|353135|late cornified envelope 1E##NM_178353|LCE1E|353135|late cornified envelope 1E	0.985056	CTCF.p2:21:0.985
chr17	42092285	42092466	reg1020505.p1	5.881	+	CU675657 AB097008 AK130810 AK313855 TSC_hg19_v1_chr17_-_42092332 BC007438 NM_032376 AK172826 AK294237	-9	-	AK314432 AK300923 BC111713 AY116538 NM_153006 AK074407	-10357	+	BC041057 NM_004160	-10539	-	TSC_hg19_v1_chr17_-_42143970 AK300637 AL832076	51591	-	TSC_hg19_v1_chr17_-_42144008 AK055218 BC044587 BC105288	51641	-	BC066298 NM_152344	52611	-	AB097008|TMEM101|84336|transmembrane protein 101##AK130810|TMEM101|84336|transmembrane protein 101##AK313855|TMEM101|84336|transmembrane protein 101##BC007438|TMEM101|84336|transmembrane protein 101##NM_032376|TMEM101|84336|transmembrane protein 101##AK172826|TMEM101|84336|transmembrane protein 101##AK294237|TMEM101|84336|transmembrane protein 101##AK314432|NAGS|162417|N-acetylglutamate synthase##AK300923|NAGS|162417|N-acetylglutamate synthase##BC111713|NAGS|162417|N-acetylglutamate synthase##AY116538|NAGS|162417|N-acetylglutamate synthase##NM_153006|NAGS|162417|N-acetylglutamate synthase##AK074407|NAGS|162417|N-acetylglutamate synthase##BC041057|PYY|5697|peptide YY##NM_004160|PYY|5697|peptide YY##AK300637|LSM12|124801|LSM12 homolog (S. cerevisiae)##AL832076|LSM12|124801|LSM12 homolog (S. cerevisiae)##AK055218|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC044587|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC105288|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC066298|LSM12|124801|LSM12 homolog (S. cerevisiae)##NM_152344|LSM12|124801|LSM12 homolog (S. cerevisiae)	0.0	
chr6	117667462	117667609	reg1022540.p1	5.881	+	AY056583 NM_153453 TSC_hg19_v1_chr6_+_117586720 AJ578053 NM_182645 BC100798 BC100799 BC118545 BC118622 BC069316 AK096878	-80724	+	BC039248 NM_173560	-469160	+	AF502962 NM_148963 AY435125 AY435126 AY435127	-517328	-	M34353 NM_002944 TSC_hg19_v1_chr6_-_117747031	79496	-	TSC_hg19_v1_chr6_+_117803805 BC035671 NM_173674 AK095973	136302	+	CU679397 TSC_hg19_v1_chr6_-_117923611 AF287894	255996	-	AY056583|VGLL2|245806|vestigial like 2 (Drosophila)##NM_153453|VGLL2|245806|vestigial like 2 (Drosophila)##AJ578053|VGLL2|245806|vestigial like 2 (Drosophila)##NM_182645|VGLL2|245806|vestigial like 2 (Drosophila)##BC100798|VGLL2|245806|vestigial like 2 (Drosophila)##BC100799|VGLL2|245806|vestigial like 2 (Drosophila)##BC118545|VGLL2|245806|vestigial like 2 (Drosophila)##BC118622|VGLL2|245806|vestigial like 2 (Drosophila)##BC069316|VGLL2|245806|vestigial like 2 (Drosophila)##AK096878|VGLL2|245806|vestigial like 2 (Drosophila)##BC039248|RFX6|222546|regulatory factor X, 6##NM_173560|RFX6|222546|regulatory factor X, 6##AF502962|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##NM_148963|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435125|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435126|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435127|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##BC035671|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##NM_173674|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AK095973|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AF287894|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing	0.992607	CTCF.p2:-25:0.993
chr6_ssto_hap7	3746564	3746676	reg1020991.p1	5.881	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.943967	CTCF.p2:-2:0.944
chr8	22445354	22445475	reg1025377.p1	5.881	+	AY007729 AY070438 NM_176871 NM_198042 TSC_hg19_v1_chr8_+_22437993 AY217349 AK024498 DQ893664 EU176702	-7364	+	TSC_hg19_v1_chr8_+_22436642 AK027800 BC071774 AF289563 BC021556	-8708	+	AK092968 AX747829 NM_021630	-9161	+	TSC_hg19_v1_chr8_+_22457113 AK295405 NM_001013842 NM_001198827 NM_173686	11706	+	TSC_hg19_v1_chr8_+_22462270 AK314535	16855	+	TSC_hg19_v1_chr8_+_22462275 BX640952	16862	+	AY007729|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AY070438|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_176871|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_198042|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AY217349|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK024498|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##DQ893664|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##EU176702|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK027800|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##BC071774|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AF289563|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##BC021556|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK092968|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##NM_021630|PDLIM2|64236|PDZ and LIM domain 2 (mystique)##AK295405|C8orf58|541565|chromosome 8 open reading frame 58##NM_001013842|C8orf58|541565|chromosome 8 open reading frame 58##NM_001198827|C8orf58|541565|chromosome 8 open reading frame 58##NM_173686|C8orf58|541565|chromosome 8 open reading frame 58##AK314535|KIAA1967|57805|KIAA1967##BX640952|KIAA1967|57805|KIAA1967	0.901752	CTCF.p2:-7:0.902
chr8	81949188	81949347	reg1024534.p2	5.881	+	AK131274 NM_001033723	-162252	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-550783	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-865497	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	75047	-	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	243506	+	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	410402	-	AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2	0.092342	
chrX	58377741	58377810	reg1017771.p1	5.880	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-440816	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-759315	+	NM_007157	-759507	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	4193424	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	4270492	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	4403092	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.0	
chr13	49875615	49875683	reg1000301.p2	5.879	+	NM_001193478 NM_030911 TSC_hg19_v1_chr13_+_49822076 BC022801 BC092434 AK312835 BC032889 BC070238 AK297400 BC009562 AY027525 BC048092 BC125202 BC125203	-53560	+	AB463896 AY603964 NM_001507	-81177	+	TSC_hg19_v1_chr13_+_49684452 AK302415 AJ749707 NM_014923 AB023187 BC107793	-191193	+	NM_030925	100085	-	TSC_hg19_v1_chr13_-_50018201 AY211923 AY288977 BX647518 NM_001079670	142532	-	TSC_hg19_v1_chr13_+_50018457 NM_031915 AK308220 AF334407	142821	+	NM_001193478|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##NM_030911|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC022801|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC092434|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AK312835|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC032889|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC070238|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AK297400|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC009562|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AY027525|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC048092|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC125202|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##BC125203|CDADC1|81602|cytidine and dCMP deaminase domain containing 1##AY603964|MLNR|2862|motilin receptor##NM_001507|MLNR|2862|motilin receptor##AK302415|FNDC3A|22862|fibronectin type III domain containing 3A##AJ749707|FNDC3A|22862|fibronectin type III domain containing 3A##NM_014923|FNDC3A|22862|fibronectin type III domain containing 3A##AB023187|FNDC3A|22862|fibronectin type III domain containing 3A##BC107793|FNDC3A|22862|fibronectin type III domain containing 3A##NM_030925|CAB39L|81617|calcium binding protein 39-like##AY211923|CAB39L|81617|calcium binding protein 39-like##AY288977|CAB39L|81617|calcium binding protein 39-like##BX647518|CAB39L|81617|calcium binding protein 39-like##NM_001079670|CAB39L|81617|calcium binding protein 39-like##NM_031915|SETDB2|83852|SET domain, bifurcated 2##AK308220|SETDB2|83852|SET domain, bifurcated 2##AF334407|SETDB2|83852|SET domain, bifurcated 2	0.0	
chr7	87376730	87376868	reg1026249.p1	5.879	+	AF345623 AF345624 AY425005 AY425006 M14758 AF345625 AK290159 NM_000927 AY425007 AY452673	-34152	-	TSC_hg19_v1_chr7_+_87257708 AK055233 NM_001134405 NM_001134406 NM_138290 BC022520 AK293607 AK294039	-118982	+	TSC_hg19_v1_chr7_-_87230197 AF016535 BC130424	-146520	-	TSC_hg19_v1_chr7_-_87505468 AK290848	128666	-	AB028069 AB028070 NM_006716	128744	+	TSC_hg19_v1_chr7_-_87505642 AK223020	128845	-	AY425005|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AY425006|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##M14758|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AF345625|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK290159|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##NM_000927|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AY425007|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK055233|RUNDC3B|154661|RUN domain containing 3B##NM_001134405|RUNDC3B|154661|RUN domain containing 3B##NM_001134406|RUNDC3B|154661|RUN domain containing 3B##NM_138290|RUNDC3B|154661|RUN domain containing 3B##BC022520|RUNDC3B|154661|RUN domain containing 3B##AK293607|RUNDC3B|154661|RUN domain containing 3B##AK294039|RUNDC3B|154661|RUN domain containing 3B##AF016535|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##BC130424|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK290848|SLC25A40|55972|solute carrier family 25, member 40##AB028069|DBF4|10926|DBF4 homolog (S. cerevisiae)##AB028070|DBF4|10926|DBF4 homolog (S. cerevisiae)##NM_006716|DBF4|10926|DBF4 homolog (S. cerevisiae)##AK223020|SLC25A40|55972|solute carrier family 25, member 40	0.739432	CTCF.p2:-11:0.739
chr1	107670208	107670337	reg1024798.p1	5.878	+	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	-70907	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-3377770	+	NM_001008221 AK292341	-3377994	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	12470	+	AB023193 TSC_hg19_v1_chr1_+_107683657	13332	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	560852	-	NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1##AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor	0.22938	CTCF.p2:0:0.229
chr11	65264821	65264981	reg1023916.p2	5.878	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	-71378	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	-72501	+	TSC_hg19_v1_chr11_+_65190274 AK026198	-74623	+	TSC_hg19_v1_chr11_+_65265158 EF177381	302	+	TSC_hg19_v1_chr11_+_65266515 BC025986 BX538238 FJ209305	1600	+	TSC_hg19_v1_chr11_+_65266869 BC104662	1898	+	AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##EF177381|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BC025986|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BX538238|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)	0.0	
chr1	21308527	21308638	reg1020202.p1	5.878	+	AK304065 TSC_hg19_v1_chr1_-_21113801	-194763	-	TSC_hg19_v1_chr1_-_21113791 BC046170	-194805	-	TSC_hg19_v1_chr1_-_21113163 AK023129 NM_016287	-195410	-	TSC_hg19_v1_chr1_-_21377387 BC094683	68808	-	BC136643 BC144335 TSC_hg19_v1_chr1_-_21377462 AK225489	68884	-	TSC_hg19_v1_chr1_-_21415672 AK302087	107104	-	AK304065|HP1BP3|50809|heterochromatin protein 1, binding protein 3##BC046170|HP1BP3|50809|heterochromatin protein 1, binding protein 3##AK023129|HP1BP3|50809|heterochromatin protein 1, binding protein 3##NM_016287|HP1BP3|50809|heterochromatin protein 1, binding protein 3##BC094683|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC136643|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC144335|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##AK225489|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##AK302087|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	0.671639	CTCF.p2:14:0.672
chr12	30287287	30287397	reg1024260.p1	5.878	+	BC042083 NM_175861	-349651	-	TSC_hg19_v1_chr12_-_29936844 GQ865601 NM_001193451	-350572	-	NM_183378	-636724	-	AK302260 NM_001190995	542818	-	U77494 TSC_hg19_v1_chr12_-_30848794	561428	-	TSC_hg19_v1_chr12_-_30848807 NM_006390	561524	-	BC042083|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_175861|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##GQ865601|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_001193451|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_183378|OVCH1|341350|ovochymase 1##AK302260|IPO8|10526|importin 8##NM_001190995|IPO8|10526|importin 8##U77494|IPO8|10526|importin 8##NM_006390|IPO8|10526|importin 8	0.0	
chr3	150021676	150021806	reg1023648.p1	5.878	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-332661	+	TSC_hg19_v1_chr3_-_149688960 BC043646	-332812	-	TSC_hg19_v1_chr3_-_149688683 AB464068 AF228738 EU832616 EU832688 AK311782 L10678 BC002964 BC095444 AK307227 AK311780 BC018049 AK297915 NM_002628 NM_053024	-333045	-	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	104331	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	105022	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	242229	-	BC012363|LOC646903|646903|uncharacterized LOC646903##BC043646|PFN2|5217|profilin 2##AF228738|PFN2|5217|profilin 2##EU832616|PFN2|5217|profilin 2##EU832688|PFN2|5217|profilin 2##AK311782|PFN2|5217|profilin 2##L10678|PFN2|5217|profilin 2##BC002964|PFN2|5217|profilin 2##BC095444|PFN2|5217|profilin 2##AK307227|PFN2|5217|profilin 2##AK311780|PFN2|5217|profilin 2##BC018049|PFN2|5217|profilin 2##AK297915|PFN2|5217|profilin 2##NM_002628|PFN2|5217|profilin 2##NM_053024|PFN2|5217|profilin 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.187438	
chr6	77392732	77392847	reg1022205.p1	5.878	+	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	-610490	-	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-933780	+	TSC_hg19_v1_chr6_+_76458926 NM_004999 BX647397 BC012598	-933873	+	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	780360	-	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	2184466	+	BC064611 TSC_hg19_v1_chr6_-_79675737 AK000712	2282963	-	HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_004999|MYO6|4646|myosin VI##BX647397|MYO6|4646|myosin VI##BC012598|MYO6|4646|myosin VI##BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC064611|PHIP|55023|pleckstrin homology domain interacting protein##AK000712|PHIP|55023|pleckstrin homology domain interacting protein	0.997222	CTCF.p2:-57:0.997
chr4	55827657	55827790	reg1023837.p2	5.877	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	-303589	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-732259	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-732443	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	164031	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	384693	+	TSC_hg19_v1_chr4_+_56212475 CU677982 CR457312	384761	+	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3##CR457312|SRD5A3|79644|steroid 5 alpha-reductase 3	0.359291	CTCF.p2:11:0.359
chr12	12161453	12161560	reg1025457.p1	5.876	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-358520	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-358732	+	TSC_hg19_v1_chr12_+_11802659 AK289441	-358833	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	62377	+	AF281254 AF281255 NM_030766 NM_138722	62895	+	AK074543 TSC_hg19_v1_chr12_-_12291395	129878	-	U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AK289441|ETV6|2120|ets variant 6##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6	0.129188	
chr1	6505311	6505411	reg1022228.p1	5.876	+	TSC_hg19_v1_chr1_+_6484835 AL136880 NM_031475	-20530	+	AB463714 BC132698 BC136963 BC142687 TSC_hg19_v1_chr1_-_6479976 AK091122 NM_019089	-25431	-	BC017365 AK057168 NM_007274	-51562	-	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	20841	-	TSC_hg19_v1_chr1_-_6545530 AK299523	40164	-	AB097001 NM_001042665 TSC_hg19_v1_chr1_-_6546016	40653	-	AL136880|ESPN|83715|espin##NM_031475|ESPN|83715|espin##BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)##NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC017365|ACOT7|11332|acyl-CoA thioesterase 7##AK057168|ACOT7|11332|acyl-CoA thioesterase 7##NM_007274|ACOT7|11332|acyl-CoA thioesterase 7##U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AK299523|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##AB097001|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_001042665|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	0.701083	CTCF.p2:5:0.701
chr17	80438819	80438919	reg1024659.p1	5.876	+	TSC_hg19_v1_chr17_+_80416616 BC016440 CU674220 CU677625	-22227	+	TSC_hg19_v1_chr17_+_80416583 AK297875 NM_001083608 NM_012336 NM_031968 BC000438 AK000929 AK303155 AK307351 AF128406	-22306	+	TSC_hg19_v1_chr17_+_80416087 NM_001038618 AK056966	-22797	+	TSC_hg19_v1_chr17_+_80477607 NM_004514	38721	+	TSC_hg19_v1_chr17_-_80606321 AK297477 BC000974 AM182326 AB464355 BC007838 NM_019613	167414	-	TSC_hg19_v1_chr17_-_80656575 BC035814 U05227 AB209711 BC018039 NM_006822	217665	-	BC016440|NARF|26502|nuclear prelamin A recognition factor##AK297875|NARF|26502|nuclear prelamin A recognition factor##NM_001083608|NARF|26502|nuclear prelamin A recognition factor##NM_012336|NARF|26502|nuclear prelamin A recognition factor##NM_031968|NARF|26502|nuclear prelamin A recognition factor##BC000438|NARF|26502|nuclear prelamin A recognition factor##AK000929|NARF|26502|nuclear prelamin A recognition factor##AK303155|NARF|26502|nuclear prelamin A recognition factor##AF128406|NARF|26502|nuclear prelamin A recognition factor##NM_001038618|NARF|26502|nuclear prelamin A recognition factor##AK056966|NARF|26502|nuclear prelamin A recognition factor##NM_004514|FOXK2|3607|forkhead box K2##AK297477|WDR45L|56270|WDR45-like##BC000974|WDR45L|56270|WDR45-like##AM182326|WDR45L|56270|WDR45-like##BC007838|WDR45L|56270|WDR45-like##NM_019613|WDR45L|56270|WDR45-like##BC035814|RAB40B|10966|RAB40B, member RAS oncogene family##U05227|RAB40B|10966|RAB40B, member RAS oncogene family##AB209711|RAB40B|10966|RAB40B, member RAS oncogene family##BC018039|RAB40B|10966|RAB40B, member RAS oncogene family##NM_006822|RAB40B|10966|RAB40B, member RAS oncogene family	0.093139	
chr7	26893553	26893661	reg1020793.p2	5.876	+	AK093321 AX748054 NM_001145531	-216118	+	TSC_hg19_v1_chr7_+_26438248 AK056484	-455345	+	AK309162 NM_001199838	-489663	+	AF072166 AJ004886 AB528968 DQ892896 DQ896144 AB014486 TSC_hg19_v1_chr7_-_26904210 BC002893 AK222885 AK313209 BC036044 AF051323 NM_003930	10586	-	S79869 S79871 S79910 U37431 AB464569 CU689416 DQ890884 DQ894038 U10421 AK308067 BC032547 AK313514 NM_005522 NM_153620	241967	-	TSC_hg19_v1_chr7_+_27135786 BC031342	242178	+	AK093321|C7orf71|285941|chromosome 7 open reading frame 71##NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71##AK056484|LOC441204|441204|uncharacterized LOC441204##AK309162|SNX10|29887|sorting nexin 10##NM_001199838|SNX10|29887|sorting nexin 10##AF072166|SKAP2|8935|src kinase associated phosphoprotein 2##AJ004886|SKAP2|8935|src kinase associated phosphoprotein 2##DQ892896|SKAP2|8935|src kinase associated phosphoprotein 2##DQ896144|SKAP2|8935|src kinase associated phosphoprotein 2##AB014486|SKAP2|8935|src kinase associated phosphoprotein 2##BC002893|SKAP2|8935|src kinase associated phosphoprotein 2##AK222885|SKAP2|8935|src kinase associated phosphoprotein 2##AK313209|SKAP2|8935|src kinase associated phosphoprotein 2##BC036044|SKAP2|8935|src kinase associated phosphoprotein 2##AF051323|SKAP2|8935|src kinase associated phosphoprotein 2##NM_003930|SKAP2|8935|src kinase associated phosphoprotein 2##S79869|HOXA1|3198|homeobox A1##S79871|HOXA1|3198|homeobox A1##S79910|HOXA1|3198|homeobox A1##U37431|HOXA1|3198|homeobox A1##DQ890884|HOXA1|3198|homeobox A1##DQ894038|HOXA1|3198|homeobox A1##U10421|HOXA1|3198|homeobox A1##AK308067|HOXA1|3198|homeobox A1##BC032547|HOXA1|3198|homeobox A1##AK313514|HOXA1|3198|homeobox A1##NM_005522|HOXA1|3198|homeobox A1##NM_153620|HOXA1|3198|homeobox A1##BC031342|HOTAIRM1|100506311|HOXA transcript antisense RNA, myeloid-specific 1 (non-protein coding)	0.735272	CTCF.p2:-7:0.735
chr8	35998857	35998966	reg1020229.p1	5.876	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-905924	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-2541416	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	-2541452	-	NM_001031836 AK302391 BC028701	642959	+	TSC_hg19_v1_chr8_-_37457377 AK025743	1458457	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	1554406	+	AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703	0.995501	CTCF.p2:-28:0.996
chr11	2320658	2320755	reg1023922.p1	5.875	+	BC028140 NM_005170 TSC_hg19_v1_chr11_-_2292209	-28511	-	TSC_hg19_v1_chr11_-_2291819 BC057801 BC136561 BC136567	-28849	-	M20911 M20912 AB591012 DQ677336 DQ677337 M17589 Y00414 M24790 NM_000360 NM_199292 NM_199293 X05290 BC143611 BC104967 BC143614	-127646	-	TSC_hg19_v1_chr11_-_2323122 AK290921 BC028070 AK310172 NM_001142946 AB029488	2471	-	TSC_hg19_v1_chr11_+_2323260 AK128812 AK307638 BC016693 NM_139022	2545	+	TSC_hg19_v1_chr11_+_2323366 AY039001 AK310116 CU677677 AK298692	2680	+	BC028140|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##NM_005170|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC057801|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136561|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136567|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##M20911|TH|7054|tyrosine hydroxylase##M20912|TH|7054|tyrosine hydroxylase##DQ677336|TH|7054|tyrosine hydroxylase##DQ677337|TH|7054|tyrosine hydroxylase##M17589|TH|7054|tyrosine hydroxylase##Y00414|TH|7054|tyrosine hydroxylase##M24790|TH|7054|tyrosine hydroxylase##NM_000360|TH|7054|tyrosine hydroxylase##NM_199292|TH|7054|tyrosine hydroxylase##NM_199293|TH|7054|tyrosine hydroxylase##X05290|TH|7054|tyrosine hydroxylase##BC143611|TH|7054|tyrosine hydroxylase##BC104967|TH|7054|tyrosine hydroxylase##BC143614|TH|7054|tyrosine hydroxylase##AK290921|C11orf21|29125|chromosome 11 open reading frame 21##BC028070|C11orf21|29125|chromosome 11 open reading frame 21##AK310172|C11orf21|29125|chromosome 11 open reading frame 21##NM_001142946|C11orf21|29125|chromosome 11 open reading frame 21##AB029488|C11orf21|29125|chromosome 11 open reading frame 21##AK128812|TSPAN32|10077|tetraspanin 32##AK307638|TSPAN32|10077|tetraspanin 32##BC016693|TSPAN32|10077|tetraspanin 32##NM_139022|TSPAN32|10077|tetraspanin 32##AY039001|TSPAN32|10077|tetraspanin 32##AK310116|TSPAN32|10077|tetraspanin 32##AK298692|TSPAN32|10077|tetraspanin 32	0.978883	CTCF.p2:2:0.979
chr1	172748021	172748147	reg1025187.p1	5.875	+	D38122 AK314874 NM_000639 X89102 BC017502 U08137 AF288573 U11821 AB528416 DQ893466 DQ896147 CU675998 AY225406 AY858799	-119835	+	TSC_hg19_v1_chr1_+_172502291 NM_016227 AK302509 AL035291 BC137125 BC144487	-245703	+	TSC_hg19_v1_chr1_+_172502152 AK302949 AJ250075 NM_014283	-245942	+	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	271972	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	426569	-	CR542033 D90224 X79929 NM_003326	428308	-	D38122|FASLG|356|Fas ligand (TNF superfamily, member 6)##AK314874|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_000639|FASLG|356|Fas ligand (TNF superfamily, member 6)##X89102|FASLG|356|Fas ligand (TNF superfamily, member 6)##BC017502|FASLG|356|Fas ligand (TNF superfamily, member 6)##U08137|FASLG|356|Fas ligand (TNF superfamily, member 6)##AF288573|FASLG|356|Fas ligand (TNF superfamily, member 6)##U11821|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ893466|FASLG|356|Fas ligand (TNF superfamily, member 6)##DQ896147|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY225406|FASLG|356|Fas ligand (TNF superfamily, member 6)##AY858799|FASLG|356|Fas ligand (TNF superfamily, member 6)##NM_016227|C1orf9|51430|chromosome 1 open reading frame 9##AK302509|C1orf9|51430|chromosome 1 open reading frame 9##AL035291|C1orf9|51430|chromosome 1 open reading frame 9##BC137125|C1orf9|51430|chromosome 1 open reading frame 9##BC144487|C1orf9|51430|chromosome 1 open reading frame 9##AK302949|C1orf9|51430|chromosome 1 open reading frame 9##AJ250075|C1orf9|51430|chromosome 1 open reading frame 9##NM_014283|C1orf9|51430|chromosome 1 open reading frame 9##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4	0.161546	
chr3	119866071	119866184	reg1021827.p2	5.875	+	TSC_hg19_v1_chr3_+_119813618 BC035247	-52457	+	TSC_hg19_v1_chr3_-_119813270 BC012760 NM_001146156 NM_002093	-52976	-	BC000251 AK290897 TSC_hg19_v1_chr3_-_119812684	-53506	-	NM_001168271 NM_153002	97014	-	TSC_hg19_v1_chr3_-_120068162 AB528173 AM393236 BC013757 NM_001099678	202014	-	TSC_hg19_v1_chr3_-_120169846 AB527652 D89937 BC000055 U06863 AK300356 AK289388 AK291138 AK311050 AK300436 BX647421 AK312261 NM_007085	303710	-	BC012760|GSK3B|2932|glycogen synthase kinase 3 beta##NM_001146156|GSK3B|2932|glycogen synthase kinase 3 beta##NM_002093|GSK3B|2932|glycogen synthase kinase 3 beta##BC000251|GSK3B|2932|glycogen synthase kinase 3 beta##AK290897|GSK3B|2932|glycogen synthase kinase 3 beta##NM_001168271|GPR156|165829|G protein-coupled receptor 156##NM_153002|GPR156|165829|G protein-coupled receptor 156##AM393236|LRRC58|116064|leucine rich repeat containing 58##BC013757|LRRC58|116064|leucine rich repeat containing 58##NM_001099678|LRRC58|116064|leucine rich repeat containing 58##BC000055|FSTL1|11167|follistatin-like 1##U06863|FSTL1|11167|follistatin-like 1##AK300356|FSTL1|11167|follistatin-like 1##AK289388|FSTL1|11167|follistatin-like 1##AK291138|FSTL1|11167|follistatin-like 1##AK311050|FSTL1|11167|follistatin-like 1##AK300436|FSTL1|11167|follistatin-like 1##BX647421|FSTL1|11167|follistatin-like 1##AK312261|FSTL1|11167|follistatin-like 1##NM_007085|FSTL1|11167|follistatin-like 1	0.919677	CTCF.p2:10:0.920
chr7	75931788	75931883	reg1037470.p1	5.875	+	TSC_hg19_v1_chr7_+_75831199 NM_001110199 BC029292	-100630	+	BC001917 TSC_hg19_v1_chr7_+_75677453 AK316587 DQ893080 DQ896341 AK293460 CR536548	-254370	+	AK095803 AK290779 TSC_hg19_v1_chr7_+_75677402	-254433	+	TSC_hg19_v1_chr7_+_75931989 NM_001540 U90906 BC000510 BC012292 AF086135 X54079 AK296890	74	+	AK311894 TSC_hg19_v1_chr7_+_75931991 BC012768 BC073768 AB020027 AL050380 DQ891304 DQ893349 DQ894489 DQ896669 AB528488 BT019888 CR407614 CR536489 BC014920	195	+	TSC_hg19_v1_chr7_+_75932877 AK311446	1075	+	NM_001110199|SRRM3|222183|serine/arginine repetitive matrix 3##BC029292|SRRM3|222183|serine/arginine repetitive matrix 3##BC001917|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK316587|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ893080|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ896341|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK293460|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##CR536548|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK095803|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK290779|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##NM_001540|HSPB1|3315|heat shock 27kDa protein 1##U90906|HSPB1|3315|heat shock 27kDa protein 1##BC000510|HSPB1|3315|heat shock 27kDa protein 1##BC012292|HSPB1|3315|heat shock 27kDa protein 1##X54079|HSPB1|3315|heat shock 27kDa protein 1##AK296890|HSPB1|3315|heat shock 27kDa protein 1##AK311894|HSPB1|3315|heat shock 27kDa protein 1##BC012768|HSPB1|3315|heat shock 27kDa protein 1##BC073768|HSPB1|3315|heat shock 27kDa protein 1##AB020027|HSPB1|3315|heat shock 27kDa protein 1##AL050380|HSPB1|3315|heat shock 27kDa protein 1##DQ891304|HSPB1|3315|heat shock 27kDa protein 1##DQ893349|HSPB1|3315|heat shock 27kDa protein 1##DQ894489|HSPB1|3315|heat shock 27kDa protein 1##DQ896669|HSPB1|3315|heat shock 27kDa protein 1##BT019888|HSPB1|3315|heat shock 27kDa protein 1##CR407614|HSPB1|3315|heat shock 27kDa protein 1##CR536489|HSPB1|3315|heat shock 27kDa protein 1##BC014920|HSPB1|3315|heat shock 27kDa protein 1##AK311446|HSPB1|3315|heat shock 27kDa protein 1	0.01064	
chr1	27293536	27293630	reg1018628.p1	5.874	+	CR749558 AK091952 AX747274 NM_152365	-6696	-	AF086922 AF100760 TSC_hg19_v1_chr1_+_27248250 BC021139 AF241788 AB019408 BC006147 BC003132 AF130736 BC002399 AM392722 AM393251 AB463146	-45291	+	TSC_hg19_v1_chr1_+_27248246 AL136725 AF125465	-45342	+	TSC_hg19_v1_chr1_+_27320182 NM_001013642 BC069216	26610	+	BC012790 BC014160 NM_052943 TSC_hg19_v1_chr1_-_27339338	45751	-	TSC_hg19_v1_chr1_-_27339448 AK122816	45871	-	CR749558|C1orf172|126695|chromosome 1 open reading frame 172##AK091952|C1orf172|126695|chromosome 1 open reading frame 172##NM_152365|C1orf172|126695|chromosome 1 open reading frame 172##AF086922|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AF100760|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##BC021139|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AF241788|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AB019408|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##BC006147|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##BC003132|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AF130736|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##BC002399|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AM392722|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AM393251|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AL136725|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##AF125465|NUDC|10726|nuclear distribution gene C homolog (A. nidulans)##NM_001013642|TRNP1|388610|TMF1-regulated nuclear protein 1##BC069216|TRNP1|388610|TMF1-regulated nuclear protein 1##BC012790|FAM46B|115572|family with sequence similarity 46, member B##BC014160|FAM46B|115572|family with sequence similarity 46, member B##NM_052943|FAM46B|115572|family with sequence similarity 46, member B##AK122816|FAM46B|115572|family with sequence similarity 46, member B	0.036922	
chr22	40336906	40337005	reg1022148.p2	5.874	+	AK303280 AK303657 AK312830 TSC_hg19_v1_chr22_+_40322634 AK303470	-14331	+	TSC_hg19_v1_chr22_+_40297183 AF129476 AF090456 CR456498 Y18051	-39708	+	AY069959 NM_004810 TSC_hg19_v1_chr22_+_40297087 AK303332 AK303512 AF236119 AJ011736 BC025692 AF042380 AF102694	-39831	+	TSC_hg19_v1_chr22_+_40390935 BC031099 NM_138435	53989	+	TSC_hg19_v1_chr22_+_40440774 NM_001024843	103954	+	TSC_hg19_v1_chr22_+_40441403 BC028626	104477	+	AK303280|GRAP2|9402|GRB2-related adaptor protein 2##AK303657|GRAP2|9402|GRB2-related adaptor protein 2##AK312830|GRAP2|9402|GRB2-related adaptor protein 2##AK303470|GRAP2|9402|GRB2-related adaptor protein 2##AF129476|GRAP2|9402|GRB2-related adaptor protein 2##AF090456|GRAP2|9402|GRB2-related adaptor protein 2##CR456498|GRAP2|9402|GRB2-related adaptor protein 2##Y18051|GRAP2|9402|GRB2-related adaptor protein 2##AY069959|GRAP2|9402|GRB2-related adaptor protein 2##NM_004810|GRAP2|9402|GRB2-related adaptor protein 2##AK303332|GRAP2|9402|GRB2-related adaptor protein 2##AK303512|GRAP2|9402|GRB2-related adaptor protein 2##AF236119|GRAP2|9402|GRB2-related adaptor protein 2##AJ011736|GRAP2|9402|GRB2-related adaptor protein 2##BC025692|GRAP2|9402|GRB2-related adaptor protein 2##AF042380|GRAP2|9402|GRB2-related adaptor protein 2##AF102694|GRAP2|9402|GRB2-related adaptor protein 2##BC031099|FAM83F|113828|family with sequence similarity 83, member F##NM_138435|FAM83F|113828|family with sequence similarity 83, member F##NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B##BC028626|TNRC6B|23112|trinucleotide repeat containing 6B	0.252732	CTCF.p2:22:0.253
chr5	14145281	14145427	reg1025186.p1	5.874	+	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	-1682	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-133484	-	AX800026 AY045575 NM_001369	-200766	-	TSC_hg19_v1_chr5_+_14488527 AK131423	343185	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	436546	+	TSC_hg19_v1_chr5_+_14581949 AK001989 BC011524 CU679940	436610	+	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A##AK001989|FAM105A|54491|family with sequence similarity 105, member A##BC011524|FAM105A|54491|family with sequence similarity 105, member A	0.0	
chr19	1853435	1853569	reg1026805.p1	5.873	+	TSC_hg19_v1_chr19_-_1848471 BC032244 NM_020695	-5041	-	AB384122 TSC_hg19_v1_chr19_-_1848439 AB032964 BC016923	-5101	-	AY302538 NM_001178002 TSC_hg19_v1_chr19_-_1812276 BC035162 NM_138813 AK125225 AK125969	-41265	-	TSC_hg19_v1_chr19_-_1863441 AF327440	9958	-	TSC_hg19_v1_chr19_-_1863556 NM_031918	10054	-	TSC_hg19_v1_chr19_-_1876169 BC067908	22664	-	BC032244|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##NM_020695|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##AB032964|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##BC016923|REXO1|57455|REX1, RNA exonuclease 1 homolog (S. cerevisiae)##AY302538|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001178002|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##BC035162|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_138813|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125225|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125969|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AF327440|KLF16|83855|Kruppel-like factor 16##NM_031918|KLF16|83855|Kruppel-like factor 16	0.762802	CTCF.p2:-1:0.763
chr22	45665286	45665467	reg1000818.p2	5.873	+	TSC_hg19_v1_chr22_-_45636776 AK094937	-28602	-	CU012960 CU013248 CR456402 TSC_hg19_v1_chr22_-_45636622 NM_001009880	-28760	-	AK315883 AK297058 TSC_hg19_v1_chr22_-_45609417	-56008	-	TSC_hg19_v1_chr22_+_45680833 AF085808 BC069544 NM_001167574 NM_006953 BC108900 CR456608 AB010637 AB528272 CU013204 CU013492	15484	+	TSC_hg19_v1_chr22_+_45704858 AK125027 NM_001104595	39574	+	TSC_hg19_v1_chr22_+_45705838 NM_017911 AK000642	40438	+	AK094937|KIAA0930|23313|KIAA0930##CU012960|KIAA0930|23313|KIAA0930##CU013248|KIAA0930|23313|KIAA0930##CR456402|KIAA0930|23313|KIAA0930##NM_001009880|KIAA0930|23313|KIAA0930##AK315883|KIAA0930|23313|KIAA0930##AK297058|KIAA0930|23313|KIAA0930##AF085808|UPK3A|7380|uroplakin 3A##BC069544|UPK3A|7380|uroplakin 3A##NM_001167574|UPK3A|7380|uroplakin 3A##NM_006953|UPK3A|7380|uroplakin 3A##BC108900|UPK3A|7380|uroplakin 3A##CR456608|UPK3A|7380|uroplakin 3A##AB010637|UPK3A|7380|uroplakin 3A##CU013204|UPK3A|7380|uroplakin 3A##CU013492|UPK3A|7380|uroplakin 3A##AK125027|FAM118A|55007|family with sequence similarity 118, member A##NM_001104595|FAM118A|55007|family with sequence similarity 118, member A##NM_017911|FAM118A|55007|family with sequence similarity 118, member A##AK000642|FAM118A|55007|family with sequence similarity 118, member A	0.0	
chr8	124232969	124233117	reg1026967.p1	5.872	+	CU690903 TSC_hg19_v1_chr8_-_124220025	-13068	-	TSC_hg19_v1_chr8_+_124194906 BC007828 CU690902	-38060	+	NM_032899 NM_207006 BC052300 TSC_hg19_v1_chr8_+_124194829	-38253	+	TSC_hg19_v1_chr8_-_124253618 AK222660 GQ129275 GQ129276 BC067796 AK027731 NM_032847	20567	-	AF195766 TSC_hg19_v1_chr8_-_124286514 AK094451 BC040481	53480	-	TSC_hg19_v1_chr8_-_124286697 NM_001017926 NM_001204180 NM_007222	53648	-	BC007828|FAM83A|84985|family with sequence similarity 83, member A##NM_032899|FAM83A|84985|family with sequence similarity 83, member A##NM_207006|FAM83A|84985|family with sequence similarity 83, member A##BC052300|FAM83A|84985|family with sequence similarity 83, member A##AK222660|C8orf76|84933|chromosome 8 open reading frame 76##GQ129275|C8orf76|84933|chromosome 8 open reading frame 76##GQ129276|C8orf76|84933|chromosome 8 open reading frame 76##BC067796|C8orf76|84933|chromosome 8 open reading frame 76##AK027731|C8orf76|84933|chromosome 8 open reading frame 76##NM_032847|C8orf76|84933|chromosome 8 open reading frame 76##AF195766|ZHX1|11244|zinc fingers and homeoboxes 1##AK094451|ZHX1|11244|zinc fingers and homeoboxes 1##BC040481|ZHX1|11244|zinc fingers and homeoboxes 1##NM_001017926|ZHX1|11244|zinc fingers and homeoboxes 1##NM_001204180|ZHX1-C8ORF76|100533106|ZHX1-C8ORF76 readthrough##NM_007222|ZHX1|11244|zinc fingers and homeoboxes 1	0.871527	CTCF.p2:-9:0.872
chrX	31075517	31075654	reg1028993.p1	5.872	+	TSC_hg19_v1_chrX_-_30907408 AK297274 NM_152787	-168126	-	TSC_hg19_v1_chrX_+_30671612 L13943 AK294938 AK294304 BX647604 AK308238 BC037549 CU688226 DQ891580 DQ894773	-403957	+	TSC_hg19_v1_chrX_+_30671539 AK313215	-404043	+	BC069538 BC100768 BC100769 BC100770 BC069069 AF285592 NM_031894	14578	-	CU688550 M92650 TSC_hg19_v1_chrX_-_31285072 BC070078 NM_004015 NM_004016 NM_004017 NM_004018 NM_004019 S42206 BC094758 AK299936 BC028720 S38776	209449	-	NM_004014 S62617	450829	-	AK297274|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##NM_152787|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##L13943|GK|2710|glycerol kinase##AK294938|GK|2710|glycerol kinase##AK294304|GK|2710|glycerol kinase##BX647604|GK|2710|glycerol kinase##AK308238|GK|2710|glycerol kinase##BC037549|GK|2710|glycerol kinase##DQ891580|GK|2710|glycerol kinase##DQ894773|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase##BC069538|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100768|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100769|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100770|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC069069|FTHL17|53940|ferritin, heavy polypeptide-like 17##AF285592|FTHL17|53940|ferritin, heavy polypeptide-like 17##NM_031894|FTHL17|53940|ferritin, heavy polypeptide-like 17##M92650|DMD|1756|dystrophin##BC070078|DMD|1756|dystrophin##NM_004015|DMD|1756|dystrophin##NM_004016|DMD|1756|dystrophin##NM_004017|DMD|1756|dystrophin##NM_004018|DMD|1756|dystrophin##NM_004019|DMD|1756|dystrophin##S42206|DMD|1756|dystrophin##BC094758|DMD|1756|dystrophin##AK299936|DMD|1756|dystrophin##BC028720|DMD|1756|dystrophin##S38776|DMD|1756|dystrophin##NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin	0.945928	CTCF.p2:-36:0.946
chr1	194264945	194265064	reg1024920.p1	5.871	+	AF288390 BC022507 NM_003783	-1109272	-	TSC_hg19_v1_chr1_+_193091308 BC007325 AF312865 AK314772 AB590625 CU688012 EU831787 EU831865 BC011808	-1173648	+	TSC_hg19_v1_chr1_+_193091242 AK300929 BC065037	-1173765	+	EU251076 BC103947 BC103948 BC103949 BC103950 AY359444 NM_198503 BX647852 AK309729 TSC_hg19_v1_chr1_-_196577612	2312521	-	TSC_hg19_v1_chr1_-_196577676 AK131498	2312678	-	NM_000186 NM_001014975 TSC_hg19_v1_chr1_+_196621172 AK291395 AK225649 X07523 Y00716 BC037285 BC012610 BC110643 BC073982 BC142699 CU691466	2356123	+	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC007325|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF312865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK314772|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831787|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK300929|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC065037|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU251076|KCNT2|343450|potassium channel, subfamily T, member 2##BC103947|KCNT2|343450|potassium channel, subfamily T, member 2##BC103948|KCNT2|343450|potassium channel, subfamily T, member 2##BC103949|KCNT2|343450|potassium channel, subfamily T, member 2##BC103950|KCNT2|343450|potassium channel, subfamily T, member 2##AY359444|KCNT2|343450|potassium channel, subfamily T, member 2##NM_198503|KCNT2|343450|potassium channel, subfamily T, member 2##BX647852|KCNT2|343450|potassium channel, subfamily T, member 2##AK309729|KCNT2|343450|potassium channel, subfamily T, member 2##AK131498|KCNT2|343450|potassium channel, subfamily T, member 2##NM_000186|CFH|3075|complement factor H##NM_001014975|CFH|3075|complement factor H##AK291395|CFH|3075|complement factor H##AK225649|CFH|3075|complement factor H##X07523|CFH|3075|complement factor H##Y00716|CFH|3075|complement factor H##BC037285|CFH|3075|complement factor H##BC012610|CFH|3075|complement factor H##BC110643|CFH|3075|complement factor H##BC073982|CFH|3075|complement factor H##BC142699|CFH|3075|complement factor H	0.028453	
chr1	221604814	221604927	reg1032242.p1	5.871	+	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	-551771	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	-551956	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	-552109	+	NM_144728	305931	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	310538	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	310560	-	DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##NM_144728|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10	0.071125	
chr12	65494043	65494153	reg1021791.p1	5.871	+	AB527171 TSC_hg19_v1_chr12_+_65224283	-269850	+	TSC_hg19_v1_chr12_+_65218446 AK299508	-275654	+	NM_015279 TSC_hg19_v1_chr12_+_65218409 AK055404	-275715	+	DQ892394 DQ895609 TSC_hg19_v1_chr12_-_65514986	20892	-	BX647427 TSC_hg19_v1_chr12_-_65515016	20921	-	TSC_hg19_v1_chr12_-_65515107 AF122922 BC018037 AY358344	20987	-	AK299508|TBC1D30|23329|TBC1 domain family, member 30##NM_015279|TBC1D30|23329|TBC1 domain family, member 30##AK055404|TBC1D30|23329|TBC1 domain family, member 30##DQ892394|WIF1|11197|WNT inhibitory factor 1##DQ895609|WIF1|11197|WNT inhibitory factor 1##BX647427|WIF1|11197|WNT inhibitory factor 1##AF122922|WIF1|11197|WNT inhibitory factor 1##BC018037|WIF1|11197|WNT inhibitory factor 1##AY358344|WIF1|11197|WNT inhibitory factor 1	0.778974	CTCF.p2:34:0.779
chr3	153573715	153573851	reg1024635.p1	5.871	+	AF086445 NM_001101337	-371500	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-693735	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-693757	+	AK127282 NM_001251962	265008	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	265419	+	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	468477	-	AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36	0.250194	CTCF.p2:-2:0.250
chr1	23058446	23058568	reg1023595.p1	5.870	+	TSC_hg19_v1_chr1_+_23037331 NM_004442 NM_017449 AK299701 BC067861 AB210018 AF025304 CU686595 L36643	-21084	+	NM_000491 TSC_hg19_v1_chr1_+_22979728 BC008983	-78784	+	NM_001114101 NM_172369 AK057792 TSC_hg19_v1_chr1_+_22970125 AF087892 AK226152 BC009016 AK130613	-88320	+	NM_001242521	283835	-	TSC_hg19_v1_chr1_+_23345960 NM_001009999 NM_015013	287448	+	TSC_hg19_v1_chr1_+_23345985 AB011173 BC040194 AK290328 BC048134	287541	+	NM_004442|EPHB2|2048|EPH receptor B2##NM_017449|EPHB2|2048|EPH receptor B2##AK299701|EPHB2|2048|EPH receptor B2##BC067861|EPHB2|2048|EPH receptor B2##AB210018|EPHB2|2048|EPH receptor B2##AF025304|EPHB2|2048|EPH receptor B2##L36643|EPHB2|2048|EPH receptor B2##NM_000491|C1QB|713|complement component 1, q subcomponent, B chain##BC008983|C1QB|713|complement component 1, q subcomponent, B chain##NM_001114101|C1QC|714|complement component 1, q subcomponent, C chain##NM_172369|C1QC|714|complement component 1, q subcomponent, C chain##AK057792|C1QC|714|complement component 1, q subcomponent, C chain##AF087892|C1QC|714|complement component 1, q subcomponent, C chain##AK226152|C1QC|714|complement component 1, q subcomponent, C chain##BC009016|C1QC|714|complement component 1, q subcomponent, C chain##AK130613|C1QC|714|complement component 1, q subcomponent, C chain##NM_001242521|LOC729059|729059|uncharacterized LOC729059##NM_001009999|KDM1A|23028|lysine (K)-specific demethylase 1A##NM_015013|KDM1A|23028|lysine (K)-specific demethylase 1A##AB011173|KDM1A|23028|lysine (K)-specific demethylase 1A##BC040194|KDM1A|23028|lysine (K)-specific demethylase 1A##AK290328|KDM1A|23028|lysine (K)-specific demethylase 1A##BC048134|KDM1A|23028|lysine (K)-specific demethylase 1A	0.1968	
chr5	144480941	144481079	reg1024930.p2	5.870	+	AK292477 CR749266 NM_020768	-930595	+	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	-930764	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	-930834	-	TSC_hg19_v1_chr5_-_145214906 BC028175 AK095695 AK125215 NM_182960 NM_205846 BC012033 NM_138492	733878	-	NM_001080516	771520	-	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	835161	+	AK292477|KCTD16|57528|potassium channel tetramerisation domain containing 16##CR749266|KCTD16|57528|potassium channel tetramerisation domain containing 16##NM_020768|KCTD16|57528|potassium channel tetramerisation domain containing 16##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC028175|PRELID2|153768|PRELI domain containing 2##AK095695|PRELID2|153768|PRELI domain containing 2##AK125215|PRELID2|153768|PRELI domain containing 2##NM_182960|PRELID2|153768|PRELI domain containing 2##NM_205846|PRELID2|153768|PRELI domain containing 2##BC012033|PRELID2|153768|PRELI domain containing 2##NM_138492|PRELID2|153768|PRELI domain containing 2##NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2	0.058804	
chr14	106610184	106610301	reg1024559.p1	5.869	+	GU552766 DQ454945 DQ454680 DQ454800 DQ100736 HQ392877 AY062313 JN110910 JN111168 L03821 L04324 FJ385334 FJ385335 HM774019 HM774079 HM774175 HM774429 HM774436 HM774460 HM774566 HM774691 HM774780 HM774984 AF165105 AY062308 DQ100831 AJ300807 AB063700 AY423173 AY062309 DQ100870 GU570344 HM994897 HM994907 HM994915 HM995019 HM995419 HM995424 HM995733 HM995761 HM995921 HM995935 HM995953 HM996087 HM996247 HM996409 DQ840731 DQ840896 AB374202 AM279603 AY866783 DQ431491 EF178033 FJ385392 GU570335 AB021538 AB063673 AB066975 AB067002 AB067017 AB067076 AB067261 AB363102 AB363150 AF062210 AF098364 AF174056 AF174100 AF174120 AF301484 AF455549 AF471257 AF471259 AF471261 AF471262 AF471264 AF471363 AF471478 AF471487 AF471497 AJ007956 AJ389180 AJ399809 AJ413989 AJ555276 AJ556639 AJ579273 AM040537 AY268370 AY466509 AY685302 AY685304 AY921574 AY921575 AY927662 AY941906 D83675 DQ065617 DQ065728 DQ535267 DQ535281 DQ535298 DQ535334 DQ535408 DQ535485 DQ926436 DQ926504 DQ926507 DQ926513 DQ926550 EF178020 GU570303 GU570338 GU570343 GU570348 L33984 S65535 Z33898 AY670714 HM995884 AF062141 L03683 L38431 X65894 X81740 M18515 BC053984 TSC_hg19_v1_chr14_-_106586668	-23741	-	DQ454787 U64487 AF460704 AF460740 AF460807 DQ454554 AL389978 FJ385400 DQ454728 DQ454993 DQ454902 GQ232943 GU552699 AY003824 AY003849 DQ454431 EF566904 AY003777 DQ454493 DQ454848 GU552714 GU552717 DQ454498 DQ454515 DQ454965 DQ523862 EF407823 DQ454754 DQ454849 DQ454990 FJ840311 FJ840313 FJ840317 FJ840329 FJ840349 FJ873842 FJ873857 FJ873909 FJ873912 FJ873925 FJ874051 FJ874081 FJ874083 FJ874089 HM116118 AY003786 EU433870 EF175391 EF175399 EF175431 EF175439 EF441746 EU433865 EU667604 EU099143 EU099237 EU099244 EU099063 EU099194 EU099113 EU099200 AM183985 AM183986 EU099292 HQ392870 AF103124 DQ100718 AF103028 AF103040 AF103322 HM774410 L07309 L07310 L07312 JN110741 L03824 L03825 L04325 HM774027 HM774097 HM774142 HM774318 HM774446 HM774453 HM774557 HM774576 HM774604 HM774628 HM774645 HM774671 HM774698 HM774809 HM774847 HM774858 HM775011 HM775058 AF165102 HM775038 HM775039 HM775042 AF082199 EU146392 EU146393 EU146395 AY376083 AY376084 AF103217 AY485363 DQ100667 DQ926397 DQ926487 AF062294 DQ187521 DQ187649 DQ523968 DQ523986 DQ524059 DQ926170 DQ926613 GU570296 GU570301 HM995316 HM995318 HM995367 HM995592 HM995658 HM995661 HM995663 HM995671 HM995696 HM995697 HM995699 HM995792 HM995793 HM995795 HM995911 HM995912 HM995913 HM995914 HM995915 HM995916 HM995917 HM995918 HM996161 HM996278 DQ187668 DQ322752 DQ322795 DQ322799 DQ322834 DQ322835 DQ322836 DQ322837 DQ322838 DQ322839 DQ322840 DQ322841 DQ322842 DQ322843 DQ322847 DQ322848 DQ322849 DQ322850 DQ322851 DQ322852 DQ322853 DQ322854 DQ322907 DQ322908 DQ322924 DQ322985 DQ322986 DQ322987 DQ840668 DQ840696 DQ840724 DQ840738 DQ840869 DQ840885 DQ840898 DQ840902 DQ926246 DQ926249 DQ926313 DQ926315 AB063717 AB063810 AB066882 AB066982 AB067264 AB067265 AB363130 AB363133 AB363178 AB363229 AB363239 AF234248 AJ306671 AY033239 AY033240 AY376073 AY376086 AY376088 AY422530 AY530313 AY640532 AY846271 AY971070 AY971132 AY986395 AY986402 DQ065641 DQ065715 DQ100950 DQ926227 DQ926469 DQ926491 DQ926596 EF178046 EU549734 FJ195526 GU570302 HQ378386 Z46761 AB021522 AB063668 AB363134 AB363177 AB363231 AF021996 AF035794 AF115122 AF119800 AF119801 AF119802 AF119803 AF119804 AF151704 AF174095 AF471243 AF471244 AF471245 AF471248 AF471251 AF471252 AF471253 AJ389186 AJ414018 AJ555260 AJ579155 AJ579190 AJ579223 AJ579232 AJ579237 AJ627246 AY530315 AY685254 AY971117 DQ065650 DQ100894 DQ100911 DQ205140 DQ205152 DQ212511 DQ431495 DQ535391 DQ535412 DQ535423 DQ535428 DQ840729 DQ840811 DQ926123 DQ926333 DQ926625 EF178050 EF633766 EF633767 EF633768 EF633798 FJ492898 GU570300 GU570349 S77136 U64493 U64507 U85230 U96395 X62972 X63081 X64241 X99352 X99366 Z96969 Z96970 Z97036 HM995655 HM995787 HM995788 HM995789 HM995870 L33033 X67907 AY392930 AY393153 AY393157 AY393162 L08089 AF062269 L06912 S72664 X65897 X81736 X81744 X81754 Z11959 BC090940 X61013 X61014 BC073758 AK097320 AK125582 AK130539 AK130586 AK130844 AK301403 TSC_hg19_v1_chr14_-_106573761	-36687	-	AF028100 AF460781 AF460830 DQ523918 DQ454686 DQ454784 AY003751 GQ232926 GQ232842 DQ454536 DQ454572 DQ454577 DQ523874 GU552698 DQ100996 AY003834 AY003866 DQ454881 DQ454918 GQ232935 GU552747 AY003780 DQ454841 DQ523891 FJ694882 FJ839966 FJ839976 FJ839978 FJ839985 FJ839992 FJ840024 FJ840027 FJ840030 FJ840039 FJ840068 FJ840074 FJ840076 FJ840077 FJ840081 FJ840084 FJ840087 FJ840121 FJ840122 FJ840152 FJ840211 FJ840345 FJ840372 FJ840374 FJ840382 FJ840393 FJ873873 FJ873898 FJ873903 FJ873918 FJ873976 FJ873981 FJ874020 FJ874039 FJ874070 AJ008190 AY003813 AY003814 EF175404 EF091903 EF091904 EF175384 EU350416 EU350417 AF035027 EU099275 EU099133 AM183981 AM183982 AM183983 HQ704031 HM774241 L04343 U63211 AF103184 FJ385385 HM774328 HM774349 HM774514 HM774642 HM774682 HM774840 HM774998 HQ704030 HQ704032 HQ704033 HQ704034 AF032360 HM774930 S56184 L03385 Y15773 AJ306670 AY376085 DQ926534 HM994910 HM995374 HM995381 AB063655 AB063669 AB063676 AB063796 AB063804 AB063927 AB066885 AB066886 AB066890 AB066980 AB066983 AB067006 AB067010 AB067016 AB067028 AB067069 AB067083 AB067103 AB067234 AB067266 AB363180 AF174058 AF174062 AJ306669 AJ309318 AM279602 AY376074 AY376080 AY944687 DQ100830 DQ100852 DQ100869 DQ100889 DQ100935 DQ926042 DQ926211 DQ926238 DQ926293 DQ926337 DQ926445 DQ926545 DQ926589 DQ926594 DQ926641 EF177963 EF177965 EU117415 FJ385303 FJ385304 FJ385360 FJ490203 GU570287 GU570291 GU570293 GU570294 HM994902 HM994970 HM994971 HM994973 HM994974 HM994975 HM994976 HM994999 HM995000 HM995001 HM995002 HM995003 HM995005 HM995006 HM995007 HM995008 HM995009 HM995010 HM995011 HM995229 HM995234 HM995240 HM995300 HM995301 HM995302 HM995303 HM995305 HM995350 HM995352 HM995354 HM995372 HM995378 HM995379 HM995382 HM995383 HM995384 HM995385 HM995386 HM995423 HM995430 HM995431 HM995449 HM995453 HM995454 HM995455 HM995458 HM995459 HM995507 HM995509 HM995510 HM995511 HM995575 HM995632 HM995835 HM995836 HM995838 HM995839 HM995840 HM995841 HM995954 HM996284 HM996494 HQ378378 U07985 Z18834 X98899 AB021529 AB021539 AF035796 AF471223 AF471224 AF471226 AF471227 AF471231 AF471235 AF471238 AF471239 AJ239353 AJ245321 AJ579149 AJ579153 AJ579156 AJ579215 AJ579229 AJ617571 AY379733 AY941939 D83676 D83677 DQ225095 DQ535264 DQ535301 DQ535363 DQ535409 DQ535438 DQ535483 EF633755 EF633756 EF633757 EF633758 EF633787 EF633789 EF633790 EF633816 EU835550 EU835551 GU570285 GU570286 HM152494 U00488 U00506 U00546 U00577 U00588 X62968 X62969 X63080 X64239 X73605 X79166 X99360 Z18318 Z33899 Z33901 Z14176 Z14171 AY994080 EU883655 DQ234395 DQ234396 DQ234397 DQ234398 DQ234399 DQ234401 EU883644 EU883645 EU883646 EU883647 EU883648 EU883649 EU883650 EU883651 EU883652 EU883653 EU883654 EU883656 EU883657 EU883658 EU883659 L23565 X53613 Z80840 CU675389 CU676902 BC021276 BC006402 TSC_hg19_v1_chr14_-_106552810 AK097367 AK123546 AK128565 AK128625 AK129508 BX640627	-57681	-	AF028103 AF028108 Z11951 FJ840130 AF460713 AF460734 DQ454527 DQ454388 DQ454699 GQ232866 DQ454529 GQ232862 GQ232892 GU552777 EF407836 AY003841 DQ454714 GU552715 GU552744 DQ454664 DQ454668 DQ454679 DQ454889 DQ523850 AF209741 FJ385398 FJ873853 GU552716 GU552740 FJ840399 FJ840405 FJ873982 FJ840136 FJ840137 FJ840146 FJ873844 FJ873859 FJ873968 AJ008185 AJ008243 DQ454505 AY003713 AY003823 AY003842 EU433861 AF103214 EF441758 AF209733 AF209739 M18511 EU099088 EU099091 EU099108 EU099125 EU099214 DQ100874 AF103360 AF103031 AF103055 AF103172 AF103027 AY062317 HM773987 JN110484 JN110743 JN110870 JN110880 JN110904 JN111065 FJ385409 FJ385427 GQ504866 HM774017 HM774087 HM774308 HM774638 HM774746 HM774912 HM774921 AF032354 AF103227 AF103255 AF082194 EU146316 EU146375 EU146379 EU146381 EU146388 EU146390 EU146391 AJ271553 AJ300806 DQ926562 L38566 AB066857 HM995144 AF035789 AF035799 AF035798 L26034 AF062296 AF062303 AF471268 DQ454900 DQ524054 HM995097 HM995098 HM995245 HM995265 HM995270 HM995272 HM995274 HM995569 HM995686 HM995688 HM995689 HM995690 HM995691 HM995692 HM995930 HM995937 HM995946 HM996125 HM996208 HM996383 HM996458 DQ322777 DQ840774 DQ840820 DQ840842 DQ840897 AJ278771 AY686927 AY866567 AY998725 DQ100923 DQ100931 DQ926186 DQ926328 DQ926496 EF178079 FJ195531 FJ195532 FJ385300 FJ385301 FJ385374 FJ385399 HM995143 L39128 X79165 AB021509 AB021517 AB021528 AB021540 AB063657 AB063800 AB063845 AB066984 AB067025 AB067128 AB363162 AB363202 AB363206 AB373605 AB373606 AB373610 AB373616 AB373630 AB373634 AF021972 AF035026 AF174091 AF471269 AF471270 AF471271 AF471274 AF471276 AF471277 AF471278 AF471279 AJ249632 AJ401163 AJ401164 AJ556720 AJ579094 AJ579101 AJ579115 AJ579140 AJ579160 AJ579180 AJ579219 AJ579227 AJ579235 AJ579263 AJ579275 AJ579285 AJ627238 AY055479 AY376081 AY971142 D83688 D83689 DQ065634 DQ535287 DQ535290 DQ535292 DQ535322 DQ535337 DQ535365 DQ535372 DQ535396 DQ535403 DQ535404 DQ926160 DQ926428 DQ926446 DQ926474 DQ926484 DQ926537 DQ926556 EF028218 EF178024 FJ195520 FJ195538 FJ385323 GU570304 HM152485 HQ689757 U97245 X62954 X62960 X87453 X99364 Y12699 Z18319 Z18322 Z18323 Z75557 Z98737 Z98738 Z98739 Z98740 AJ401161 M34023 L14818 X56523 X56524 AF431053 AF431055 Z14169 AY505570 X81723 X81743 Z14216 Z80843 L29153 L29154 Z14960 M34032 BC065820 BC014667 TSC_hg19_v1_chr14_-_106610847 AK123981 AK301228 AK130434 AK289373	353	-	U32483 U32956 AF028093 AF028101 AF028111 FN562934 FN562935 FN562936 FN562938 FN562940 FN562941 FN562942 FN562943 FN562969 FN562970 FN562971 FN562972 FN562973 FN562974 FN562976 FN562977 FN562978 FN562979 FN562980 FN562981 FN562982 FN562983 FN564030 AY393108 GU552686 DQ926435 GU552684 GU552688 GU552757 GU552781 GU552690 AY003829 DQ454593 DQ454964 GU552735 FJ839984 FJ873855 FJ873870 FJ873978 FJ874013 HM116198 HM116220 AY003773 AY466515 EF091911 EF175403 EU667600 GQ232801 GQ232810 GQ232870 GQ232884 GQ232937 GQ232940 GU358677 DQ454763 L33029 AB063742 AB063753 AF209885 AJ007326 AY998724 EU099272 AF343408 AM279479 AM279486 AM279587 AM279589 AF103137 AF103300 AF103139 AY640542 HM774290 HM774693 HQ704036 JN111131 JN111139 JN111144 JN111184 JN111186 JN111187 JN111191 JN111197 JN111211 GQ504857 GQ504898 HM774123 HM774196 HM774674 JN110995 AY515008 HM774096 HM774295 HM774432 HM774654 HM774929 JN110663 JN110917 JN110945 JN110948 JN111032 JN111172 L04345 EF177943 FJ385330 FJ385333 FJ385428 HM774077 HM774081 HM774160 HM774325 HM774354 HM774361 HM774528 HM774594 HM774651 HM774665 HM774673 HM774683 HM774694 HM774869 HM774922 HQ704035 AF103230 AF103158 AF103095 AF103101 AF103237 AF103326 DQ926493 DQ097894 DQ097898 EF624133 EF624134 EF624137 EF624139 EU099193 EU146334 EU146384 AF103118 FJ385354 AY393014 EU099058 EU099190 HM995112 AY393019 L12067 L12070 AY393221 AY393225 AY393230 AY393244 AY393245 AY393246 AY393253 AY393261 AY393265 AY393272 AY393339 AY393362 AY393364 AY393494 AY393498 AY393507 AY393512 AY393521 AY393526 AY393527 AY393537 AY393658 AY393663 AY393681 EF177942 EF178122 AY640486 AF022009 AF062293 AF062306 AY685298 AY866751 AY941910 AY941960 DQ100669 DQ100695 DQ100823 DQ101000 DQ523958 GU570214 GU570234 GU570240 GU570244 HM994961 HM995031 HM995113 HM995115 HM995117 HM995118 HM995409 HM995411 HM995412 HM995413 HM995414 HM995415 HM995428 HM995461 HM995728 HM996035 HM996132 HM996228 HM996503 HM996531 HM996549 HQ378367 U64480 AB066989 AB067026 AB363145 AB363159 AY033251 AY033263 AY033264 AY941851 AY941917 DQ065675 DQ065679 DQ065695 DQ926155 DQ926171 DQ926203 DQ926402 DQ926411 DQ926472 DQ926480 DQ926481 DQ926483 DQ926540 DQ926542 DQ926549 EF177954 EF178002 EF178074 EF178082 EU794408 EU794435 FJ195464 FJ195469 FJ195474 FJ385305 FJ385319 FJ385363 FJ385390 FM160411 HQ378352 Z92891 AB063681 AB063682 AB063683 AB063684 AB063688 AB063689 AB063692 AB063693 AB063694 AB063695 AB063696 AB063702 AB063710 AB063718 AB063722 AB063725 AB063737 AB063738 AB063739 AB063746 AB063748 AB063786 AB063788 AB063795 AB063814 AB063816 AB063817 AB063819 AB063820 AB063821 AB063823 AB063825 AB063870 AB063904 AB063923 AB066999 AB067155 AB067156 AB067160 AB067163 AB067165 AB067171 AB067179 AB067302 AB067303 AB067332 AB067397 AF021967 AF021968 AF062199 AF062246 AF115131 AF115132 AF115133 AF115134 AF174092 AF174102 AF174123 AJ239345 AJ293739 AJ293740 AJ413994 AJ414022 AY530314 AY530319 AY971114 DQ065688 DQ100806 DQ926283 DQ926285 DQ926517 GU570230 GU570235 GU570236 GU570237 GU570238 GU570242 HM995881 HQ689758 JN158093 U00500 U00503 U00542 U00589 U64484 U77375 X61647 X91804 Z18832 Z18851 Z46855 DQ535265 DQ535277 DQ535295 DQ535369 DQ535473 EF177949 EF178045 EF178047 EF178059 EF178069 HM995648 HM995649 HM995876 AF026930 AF062147 AF062150 AF062212 AF062265 AF174028 L38435 M28136 X15611 X60504 Z14963 BC073789 BC051319 BC051328 TSC_hg19_v1_chr14_-_106642052 AK301327 AK301389 BC005951 BX640625 BX640626	31578	-	AY885219 X61021 Z14181 S55735 AY003795 DQ454455 DQ454409 AF460804 AF460662 AF460801 DQ454397 DQ100714 DQ523908 GQ232944 GQ232956 GQ232797 DQ840786 GQ232980 DQ454544 AY003853 DQ454479 DQ454535 DQ454792 DQ454854 DQ523849 DQ523895 GQ232770 GQ232955 DQ454396 DQ454585 DQ454631 DQ454654 DQ454956 DQ523905 GQ232836 AY003731 AY003716 AY003784 DQ454389 DQ454410 DQ454413 DQ454468 DQ454520 DQ454542 DQ454636 DQ454958 DQ454970 DQ523897 GQ232858 DQ454415 DQ454603 DQ454652 DQ454660 DQ454905 DQ454967 DQ454973 DQ523880 FJ694878 GQ232876 EF407825 EF407842 FJ840131 Z11947 FJ840333 FJ840335 FJ873821 FJ873823 FJ873828 FJ873833 FJ873836 FJ873860 FJ873862 FJ873874 FJ873877 FJ873883 FJ873914 FJ873942 FJ873962 FJ873970 FJ873987 FJ873990 FJ873992 FJ874005 FJ874027 FJ874036 FJ874038 FJ874063 FJ874086 AJ008226 DQ001066 AJ487489 EF091900 EF091901 EF091902 EF175385 EF407838 EF407845 EU814964 FJ694872 JF810262 JF810268 AY393066 AF209735 EU099104 EU099065 EU099101 EU099149 EU099151 EU099184 HM774293 EU099140 EU099070 EU099084 AF158380 EU099130 EU099206 EU099239 EU099243 EU099258 DQ118258 EU090051 DQ524167 EU099262 AF343414 DQ097900 EF555587 EU619977 AF103077 AF103170 AM279610 HM774182 U63212 HM995125 AF035793 AF103329 AF103330 AF103112 AF103182 AJ239379 EF555588 TSC_hg19_v1_chr14_-_106691939 HM774712 HM774761 JN110464 JN110738 JN110826 JN110827 JN110839 JN110903 JN110961 JN110967 JN111019 JN111020 JN111030 JN111035 JN111063 JN111100 JN111115 JN111156 L04329 GQ504855 GQ504939 GQ504944 GQ504967 HM774165 HM774369 HM774525 HM774602 HM774676 HM774690 HM774752 HM774770 HM774773 HM774906 HM775035 HM775044 HQ703986 HQ703987 HQ703995 HQ704026 L26905 L33025 AF103232 JN110697 AF032350 AF032352 AF103105 AJ239387 HM774240 Y14934 Y14935 Y14942 AF103145 EF624220 EU146314 EU146319 EU146378 AB266092 HM996466 DQ100899 AY423192 EF633794 EF633821 HM996470 HM996128 HM995111 AB027443 AF471507 DQ100917 DQ431609 U00572 DQ100693 DQ100840 DQ187606 DQ431612 DQ431613 DQ454842 DQ523995 DQ523997 DQ524047 DQ524062 EF633795 EF633796 HM995012 HM995014 HM995015 HM995084 HM995085 HM995086 HM995089 HM995091 HM995099 HM995100 HM995101 HM995102 HM995103 HM995104 HM995105 HM995106 HM995107 HM995108 HM995109 HM995110 HM995146 HM995147 HM995181 HM995188 HM995201 HM995278 HM995279 HM995280 HM995282 HM995284 HM995285 HM995292 HM995392 HM995530 HM995634 HM995888 HM995892 HM996033 HM996054 HM996072 HM996116 HM996119 HM996127 HM996149 HM996152 HM996173 HM996175 HM996181 HM996217 HM996257 HM996264 HM996267 HM996277 HM996341 HM996536 HM996544 DQ187628 DQ322746 DQ322747 DQ322768 DQ323029 DQ323030 DQ840720 DQ840783 DQ840784 DQ840785 DQ840787 DQ840788 DQ840789 DQ840790 DQ840792 DQ840793 DQ840794 DQ840795 DQ840796 DQ840797 DQ840817 DQ840822 DQ840837 AB453230 AJ245260 AY781807 AY866546 AY866968 AY941949 DQ005279 DQ100697 DQ100798 DQ100815 DQ100893 DQ100898 DQ100901 DQ100925 DQ100947 DQ926257 DQ926305 DQ926590 HQ378339 L19904 U21270 AB063691 AB063759 AB063908 AB066881 AB066972 AB066974 AB066976 AB066979 AB067033 AB363081 AB453231 AF044445 AF052523 AF062162 AF408719 AF455550 AF460967 AF471211 AJ001171 AJ243108 AJ271554 AJ389178 AJ389193 AJ519292 AJ555251 AJ555252 AY033254 AY033285 AY055481 AY466506 AY553643 AY553648 AY577302 AY685252 AY685253 AY846272 AY866763 AY866786 D83686 DQ005290 DQ065626 DQ065630 DQ065668 DQ065694 DQ065704 DQ212512 DQ431611 DQ535452 DQ840743 DQ840747 DQ840748 DQ840749 DQ840750 DQ840751 DQ840752 DQ840812 DQ926167 EF177948 EF177958 EF177959 EF633763 EF633764 EF633797 FJ039786 FJ039789 FJ385383 FJ481087 FJ492943 GU570307 HM152488 HM152500 HM152517 HM152520 HQ689728 S73912 U00508 U06787 U64497 U77372 X99354 Z18317 Z18324 L26898 AJ519295 HM995778 HM995962 AJ519313 HM995777 HM995779 HM995832 HM995882 HM995893 HM995902 HM995903 HM995904 HM995905	81596	-	BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AL389978|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BC090940|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073758|IGHM|3507|immunoglobulin heavy constant mu##AK097320|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125582|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130539|IGHM|3507|immunoglobulin heavy constant mu##AK130586|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130844|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301403|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC021276|IGHD|3495|immunoglobulin heavy constant delta##BC006402|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097367|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123546|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128565|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128625|IGHD|3495|immunoglobulin heavy constant delta##AK129508|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640627|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC065820|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC014667|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130434|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073789|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC051328|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK301327|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301389|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC005951|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640625|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BX640626|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.99966	CTCF.p2:2:1.000
chr6	14044493	14044596	reg1024907.p1	5.869	+	NM_001165033 AK090576 AX746519	-119101	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	-119378	+	NM_001165034	-119868	+	NM_001251901	72942	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	73361	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	73478	+	NM_001165033|RNF182|221687|ring finger protein 182##AK090576|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182##NM_001165034|RNF182|221687|ring finger protein 182##NM_001251901|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule	0.465424	CTCF.p2:-5:0.340
chr3	62187236	62187353	reg1022073.p1	5.868	+	AB055764 TSC_hg19_v1_chr3_-_61728812	-458483	-	L09247 AB385117 TSC_hg19_v1_chr3_+_61548071	-639318	+	BC047734 TSC_hg19_v1_chr3_+_61547294	-640008	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	117412	+	BC017772 NM_020685	118101	+	AK290464 NM_018008	171895	-	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2	0.234655	CTCF.p2:7:0.235
chr6_dbb_hap3	3491992	3492141	reg1024897.p1	5.868	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999422	CTCF.p2:16:0.999
chrX	84364386	84364519	reg1021501.p1	5.868	+	NM_001012980	-479	-	AK130506 NM_198450 AY358193 BC107095 BC107096 CR749250	-105585	+	BC101720 BC101722 BC143522 BX538112 AK055240 AK290050 BX649166 NM_001177478 NM_001177479 NM_144657	-607010	-	TSC_hg19_v1_chrX_+_84498996 NM_021998	134545	+	BC006349 TSC_hg19_v1_chrX_+_84499121 AK308097	134634	+	TSC_hg19_v1_chrX_-_84634396 DQ892227	269975	-	NM_001012980|SATL1|340562|spermidine/spermine N1-acetyl transferase-like 1##AK130506|APOOL|139322|apolipoprotein O-like##NM_198450|APOOL|139322|apolipoprotein O-like##AY358193|APOOL|139322|apolipoprotein O-like##BC107095|APOOL|139322|apolipoprotein O-like##BC107096|APOOL|139322|apolipoprotein O-like##CR749250|APOOL|139322|apolipoprotein O-like##BC101720|HDX|139324|highly divergent homeobox##BC101722|HDX|139324|highly divergent homeobox##BC143522|HDX|139324|highly divergent homeobox##BX538112|HDX|139324|highly divergent homeobox##AK055240|HDX|139324|highly divergent homeobox##AK290050|HDX|139324|highly divergent homeobox##BX649166|HDX|139324|highly divergent homeobox##NM_001177478|HDX|139324|highly divergent homeobox##NM_001177479|HDX|139324|highly divergent homeobox##NM_144657|HDX|139324|highly divergent homeobox##NM_021998|ZNF711|7552|zinc finger protein 711##BC006349|ZNF711|7552|zinc finger protein 711##AK308097|ZNF711|7552|zinc finger protein 711##DQ892227|POF1B|79983|premature ovarian failure, 1B	0.0	
chr19	35760678	35760793	reg1009294.p2	5.867	+	AB528283 X90826 AY147880 CR536504 TSC_hg19_v1_chr19_+_35760006 AK297022	-702	+	BC049821 TSC_hg19_v1_chr19_+_35759979	-762	+	TSC_hg19_v1_chr19_+_35759895 NM_003367 NM_207291 X90825	-843	+	AF309489 NM_021175 TSC_hg19_v1_chr19_+_35773430 AK096110 BC020612 AF131292 AY358669 AJ277280	12690	+	NM_001199216 NM_002361 NM_080600 AK223562 BC093045 TSC_hg19_v1_chr19_+_35783063 BC034042 AK094545 AK222649 AK308976 M29273 AB209170 AK294644 AK222680 BC053347	22307	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	59356	+	X90826|USF2|7392|upstream transcription factor 2, c-fos interacting##AY147880|USF2|7392|upstream transcription factor 2, c-fos interacting##CR536504|USF2|7392|upstream transcription factor 2, c-fos interacting##AK297022|USF2|7392|upstream transcription factor 2, c-fos interacting##BC049821|USF2|7392|upstream transcription factor 2, c-fos interacting##NM_003367|USF2|7392|upstream transcription factor 2, c-fos interacting##NM_207291|USF2|7392|upstream transcription factor 2, c-fos interacting##X90825|USF2|7392|upstream transcription factor 2, c-fos interacting##AF309489|HAMP|57817|hepcidin antimicrobial peptide##NM_021175|HAMP|57817|hepcidin antimicrobial peptide##AK096110|HAMP|57817|hepcidin antimicrobial peptide##BC020612|HAMP|57817|hepcidin antimicrobial peptide##AF131292|HAMP|57817|hepcidin antimicrobial peptide##AY358669|HAMP|57817|hepcidin antimicrobial peptide##AJ277280|HAMP|57817|hepcidin antimicrobial peptide##NM_001199216|MAG|4099|myelin associated glycoprotein##NM_002361|MAG|4099|myelin associated glycoprotein##NM_080600|MAG|4099|myelin associated glycoprotein##AK223562|MAG|4099|myelin associated glycoprotein##BC093045|MAG|4099|myelin associated glycoprotein##BC034042|MAG|4099|myelin associated glycoprotein##AK094545|MAG|4099|myelin associated glycoprotein##AK222649|MAG|4099|myelin associated glycoprotein##AK308976|MAG|4099|myelin associated glycoprotein##M29273|MAG|4099|myelin associated glycoprotein##AK294644|MAG|4099|myelin associated glycoprotein##AK222680|MAG|4099|myelin associated glycoprotein##BC053347|MAG|4099|myelin associated glycoprotein##NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule	0.997061	CTCF.p2:-34:0.997
chr19	35806818	35806963	reg1020841.p2	5.867	+	NM_001199216 NM_002361 NM_080600 AK223562 BC093045 TSC_hg19_v1_chr19_+_35783063 BC034042 AK094545 AK222649 AK308976 M29273 AB209170 AK294644 AK222680 BC053347	-23848	+	AF309489 NM_021175 TSC_hg19_v1_chr19_+_35773430 AK096110 BC020612 AF131292 AY358669 AJ277280	-33465	+	AB528283 X90826 AY147880 CR536504 TSC_hg19_v1_chr19_+_35760006 AK297022	-46857	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	13201	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	35560	+	AK290710 NM_005304 BC035657	42604	+	NM_001199216|MAG|4099|myelin associated glycoprotein##NM_002361|MAG|4099|myelin associated glycoprotein##NM_080600|MAG|4099|myelin associated glycoprotein##AK223562|MAG|4099|myelin associated glycoprotein##BC093045|MAG|4099|myelin associated glycoprotein##BC034042|MAG|4099|myelin associated glycoprotein##AK094545|MAG|4099|myelin associated glycoprotein##AK222649|MAG|4099|myelin associated glycoprotein##AK308976|MAG|4099|myelin associated glycoprotein##M29273|MAG|4099|myelin associated glycoprotein##AK294644|MAG|4099|myelin associated glycoprotein##AK222680|MAG|4099|myelin associated glycoprotein##BC053347|MAG|4099|myelin associated glycoprotein##AF309489|HAMP|57817|hepcidin antimicrobial peptide##NM_021175|HAMP|57817|hepcidin antimicrobial peptide##AK096110|HAMP|57817|hepcidin antimicrobial peptide##BC020612|HAMP|57817|hepcidin antimicrobial peptide##AF131292|HAMP|57817|hepcidin antimicrobial peptide##AY358669|HAMP|57817|hepcidin antimicrobial peptide##AJ277280|HAMP|57817|hepcidin antimicrobial peptide##X90826|USF2|7392|upstream transcription factor 2, c-fos interacting##AY147880|USF2|7392|upstream transcription factor 2, c-fos interacting##CR536504|USF2|7392|upstream transcription factor 2, c-fos interacting##AK297022|USF2|7392|upstream transcription factor 2, c-fos interacting##NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3	0.03445	
chr8	6687745	6687858	reg1024768.p1	5.867	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	-121618	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	-121861	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	-121910	+	AY534243 AY358489 AY534242 NM_207411	5291	-	BC033298 BC047677 X92744 U73945 NM_005218	47682	-	M98331 BC093951 BC093953 BC069667 BC069710 BC069728 BC069769 NM_001926	95784	-	AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AY534243|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY358489|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY534242|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##NM_207411|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##BC033298|DEFB1|1672|defensin, beta 1##BC047677|DEFB1|1672|defensin, beta 1##X92744|DEFB1|1672|defensin, beta 1##U73945|DEFB1|1672|defensin, beta 1##NM_005218|DEFB1|1672|defensin, beta 1##M98331|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093951|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093953|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069667|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069710|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069728|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069769|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##NM_001926|DEFA6|1671|defensin, alpha 6, Paneth cell-specific	0.843933	CTCF.p2:3:0.844
chr9	127242936	127243065	reg1024453.p1	5.867	+	AY278562 NM_001161808	-29578	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	-65280	-	TSC_hg19_v1_chr9_+_127119114 BC042968	-123831	+	TSC_hg19_v1_chr9_-_127269711 BC032501 NM_004959	26704	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	177704	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	290510	-	AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144##BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1	0.157003	
chr12	121497932	121498036	reg1022287.p1	5.866	+	TSC_hg19_v1_chr12_-_121476781 HQ258301 AJ225089 AK314419 NM_003733 NM_198213 AK023956 BC117408 BC117410	-21201	-	TSC_hg19_v1_chr12_-_121454291 AK222630 AK299170 AK301566 AK022510 AK225162 NM_022895 AK307971	-43690	-	TSC_hg19_v1_chr12_-_121454230 BC014661	-43740	-	NM_002562 TSC_hg19_v1_chr12_+_121570744 AK294126 AK290405 AK296432 BC011913 BC121157 BC121158 AB209709 BC007679 AK090866 AK225163 AX746656 Y09561 GQ180122 DQ893457 DQ896337 AB590390 CU680114 AY847298 AY847299 AY847300 AY847301 AY847302 AY847303 AY847304 DQ399293	72717	+	U83993 NM_002560	149677	+	TSC_hg19_v1_chr12_+_121647931 AK293599 AK293660 AK297704 AK308549 AK308868 BC017458	149908	+	HQ258301|OASL|8638|2'-5'-oligoadenylate synthetase-like##AJ225089|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK314419|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_003733|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_198213|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK023956|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117408|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117410|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK222630|C12orf43|64897|chromosome 12 open reading frame 43##AK299170|C12orf43|64897|chromosome 12 open reading frame 43##AK301566|C12orf43|64897|chromosome 12 open reading frame 43##AK022510|C12orf43|64897|chromosome 12 open reading frame 43##AK225162|C12orf43|64897|chromosome 12 open reading frame 43##NM_022895|C12orf43|64897|chromosome 12 open reading frame 43##AK307971|C12orf43|64897|chromosome 12 open reading frame 43##BC014661|C12orf43|64897|chromosome 12 open reading frame 43##NM_002562|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK294126|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK290405|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK296432|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC011913|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121157|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121158|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AB209709|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC007679|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK090866|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK225163|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##Y09561|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##GQ180122|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ893457|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ896337|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847298|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847299|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847300|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847301|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847302|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847303|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847304|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ399293|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##U83993|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##NM_002560|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293599|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293660|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK297704|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308549|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308868|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC017458|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4	0.439406	CTCF.p2:7:0.439
chr12	99784514	99784626	reg1023784.p1	5.866	+	AK294191 NM_001204067	-235703	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	-236013	-	AY356353 AK315954 AM980945 AK294994 TSC_hg19_v1_chr12_-_99288638 AK295988 NM_001204065 NM_001204079 NM_001204080 NM_001204081	-495983	-	NM_153364 AK312767 BC031221	256960	+	NM_152788	593861	-	BC127017 AK125813 TSC_hg19_v1_chr12_-_100536637 BC014891	751979	-	AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_153364|FAM71C|196472|family with sequence similarity 71, member C##AK312767|FAM71C|196472|family with sequence similarity 71, member C##BC031221|FAM71C|196472|family with sequence similarity 71, member C##NM_152788|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC127017|UHRF1BP1L|23074|UHRF1 binding protein 1-like##AK125813|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC014891|UHRF1BP1L|23074|UHRF1 binding protein 1-like	0.079722	
chr2	28976339	28976447	reg1020359.p1	5.866	+	TSC_hg19_v1_chr2_+_28974924 BC002697 BC012045 AB464241 AM392772 BT019744 CR542263 CR542285	-1484	+	TSC_hg19_v1_chr2_+_28974719 AK303682 AK295957 AK316532 NM_206876 NM_002709 BX647970 AK312329 BX647295 X80910	-1719	+	TSC_hg19_v1_chr2_+_28824770 BC042674	-151610	+	BC093005 NM_001142634 NM_182756 BC047224	57314	+	NM_001008779 AB590634 AY820303 AY820304	62478	+	AK225551 CU674472 CU679681 TSC_hg19_v1_chr2_-_29093160 AK308821 BC010365 AL136689 BC000952 AK000635 AK225524 NM_017910	116766	-	BC002697|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BC012045|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AM392772|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BT019744|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##CR542263|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##CR542285|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK303682|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK295957|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK316532|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_206876|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_002709|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647970|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK312329|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647295|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##X80910|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BC042674|PLB1|151056|phospholipase B1##BC093005|SPDYA|245711|speedy homolog A (Xenopus laevis)##NM_001142634|SPDYA|245711|speedy homolog A (Xenopus laevis)##NM_182756|SPDYA|245711|speedy homolog A (Xenopus laevis)##BC047224|SPDYA|245711|speedy homolog A (Xenopus laevis)##NM_001008779|SPDYA|245711|speedy homolog A (Xenopus laevis)##AY820303|SPDYA|245711|speedy homolog A (Xenopus laevis)##AY820304|SPDYA|245711|speedy homolog A (Xenopus laevis)##AK225551|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##BC010365|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##AL136689|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##BC000952|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##AK225524|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##NM_017910|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)	0.0	
chr4	27704819	27704912	reg1021858.p1	5.866	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-842325	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-1119185	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-1212880	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3017134	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3017329	+	TSC_hg19_v1_chr4_+_30722465 AB006756	3017594	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.998891	CTCF.p2:-12:0.999
chr6	26569482	26569615	reg1025762.p2	5.866	+	TSC_hg19_v1_chr6_+_26538630 NM_006353 AK311841 BC001282	-30918	+	U39576 BC096312 BC096313 BC096314 BC096315 NM_001732	-68077	+	NM_001197234 NM_007049 NM_078476 TSC_hg19_v1_chr6_+_26458182 AK297098 NM_001197233 BC016661 AB209777 U90543	-111358	+	TSC_hg19_v1_chr6_+_26597203 NM_013375 BC066313 BC048812 AB027258 AB463399 CU688138 CU690582 EU446795	27659	+	TSC_hg19_v1_chr6_-_26659967 NM_001242797 NM_001242798 NM_001242799 NM_024639	90404	-	AB591038 BC014312 TSC_hg19_v1_chr6_-_27100575 NM_021058 AK311849	531017	-	NM_006353|HMGN4|10473|high mobility group nucleosomal binding domain 4##AK311841|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC001282|HMGN4|10473|high mobility group nucleosomal binding domain 4##U39576|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096312|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096313|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096314|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096315|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001732|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001197234|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_007049|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_078476|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AK297098|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_001197233|BTN2A1|11120|butyrophilin, subfamily 2, member A1##BC016661|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AB209777|BTN2A1|11120|butyrophilin, subfamily 2, member A1##U90543|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_013375|ABT1|29777|activator of basal transcription 1##BC066313|ABT1|29777|activator of basal transcription 1##BC048812|ABT1|29777|activator of basal transcription 1##AB027258|ABT1|29777|activator of basal transcription 1##EU446795|ABT1|29777|activator of basal transcription 1##NM_001242797|ZNF322|79692|zinc finger protein 322##NM_001242798|ZNF322|79692|zinc finger protein 322##NM_001242799|ZNF322|79692|zinc finger protein 322##NM_024639|ZNF322|79692|zinc finger protein 322##BC014312|HIST1H2BJ|8970|histone cluster 1, H2bj##NM_021058|HIST1H2BJ|8970|histone cluster 1, H2bj##AK311849|HIST1H2BJ|8970|histone cluster 1, H2bj	0.0	
chr10	23945798	23945908	reg1027674.p1	5.865	+	AB188491 NM_001145373 TSC_hg19_v1_chr10_+_23728216	-217643	+	BC035732 NM_153714	-312082	-	AB463998 NM_178161	-464395	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	37824	+	AK091142 AX746804 NM_001098501 NM_019590 TSC_hg19_v1_chr10_+_24497850	551935	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	552241	+	AB188491|OTUD1|220213|OTU domain containing 1##NM_001145373|OTUD1|220213|OTU domain containing 1##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67##NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a##AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217##AK091142|KIAA1217|56243|KIAA1217##NM_001098501|KIAA1217|56243|KIAA1217##NM_019590|KIAA1217|56243|KIAA1217##AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217	0.0	
chr1	29658834	29658943	reg1024506.p1	5.865	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-95840	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-101441	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-101508	-	TSC_hg19_v1_chr1_+_31191648 AK057725	1532743	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	1537544	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	1571744	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	0.94008	CTCF.p2:14:0.940
chr2	46457353	46457507	reg1025991.p2	5.865	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-578356	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-619023	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-662302	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	67161	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	67545	+	NM_001145051	249273	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.0	
chrX	65628387	65628491	reg1020978.p2	5.865	+	NM_001130860 AK311043 AB014598 NM_014799 AY358990 AK307761	-244297	+	TSC_hg19_v1_chrX_+_65382627 BC011561	-245795	+	NM_138737 TSC_hg19_v1_chrX_+_65382512	-245964	+	AX775690 AX775692 AF298812 AX775694 AY152724 CU689984 AB528008 AY358735 AY358736 NM_001242310	207419	-	BC034919 AK296264 AK299018 NM_021783	230447	-	AK314881 NM_001199687	230684	-	NM_001130860|HEPH|9843|hephaestin##AK311043|HEPH|9843|hephaestin##AB014598|HEPH|9843|hephaestin##NM_014799|HEPH|9843|hephaestin##AY358990|HEPH|9843|hephaestin##AK307761|HEPH|9843|hephaestin##BC011561|HEPH|9843|hephaestin##NM_138737|HEPH|9843|hephaestin##AF298812|EDA2R|60401|ectodysplasin A2 receptor##AY152724|EDA2R|60401|ectodysplasin A2 receptor##AY358735|EDA2R|60401|ectodysplasin A2 receptor##AY358736|EDA2R|60401|ectodysplasin A2 receptor##NM_001242310|EDA2R|60401|ectodysplasin A2 receptor##BC034919|EDA2R|60401|ectodysplasin A2 receptor##AK296264|EDA2R|60401|ectodysplasin A2 receptor##AK299018|EDA2R|60401|ectodysplasin A2 receptor##NM_021783|EDA2R|60401|ectodysplasin A2 receptor##AK314881|EDA2R|60401|ectodysplasin A2 receptor##NM_001199687|EDA2R|60401|ectodysplasin A2 receptor	0.025349	
chr12	8572309	8572475	reg1020708.p1	5.864	+	BC042608 AK001270 NM_018088	-192189	-	TSC_hg19_v1_chr12_+_8332811 AK096301 BC048994 AK311411 BC034777	-239566	+	NM_001004328	-247243	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	36210	+	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	93839	+	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	121082	-	BC042608|FAM90A1|55138|family with sequence similarity 90, member A1##AK001270|FAM90A1|55138|family with sequence similarity 90, member A1##NM_018088|FAM90A1|55138|family with sequence similarity 90, member A1##AK096301|FAM66C|440078|family with sequence similarity 66, member C##BC048994|FAM66C|440078|family with sequence similarity 66, member C##BC034777|FAM66C|440078|family with sequence similarity 66, member C##NM_001004328|ZNF705A|440077|zinc finger protein 705A##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E	1.632083	CTCF.p2:31:0.740	CTCF.p2:-71:0.892
chr16	56547945	56548064	reg1023520.p2	5.864	+	AK001688 TSC_hg19_v1_chr16_+_56485464 AK022130 BC032919 AK304584 AB046832	-62527	+	NM_018233 TSC_hg19_v1_chr16_+_56485431 AK022752	-62576	+	AJ001810 CR456919 AB590091 AM392991 AM393219 DQ892142 DQ895336 TSC_hg19_v1_chr16_-_56485242 BC001403 BX647665 NM_007006 AK312721 BX537360	-62794	-	AB527821 DQ892680 DQ895923 TSC_hg19_v1_chr16_-_56553937 AK289604 BC014140 AK309068 AK027635	5860	-	TSC_hg19_v1_chr16_-_56553962 AB208905 NM_031885	5981	-	BC113442 BC113444 NM_032935	50956	+	AK001688|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1##AK022130|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1##BC032919|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1##AK304584|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1##AB046832|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1##NM_018233|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1##AK022752|OGFOD1|55239|2-oxoglutarate and iron-dependent oxygenase domain containing 1##AJ001810|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##CR456919|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AM392991|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AM393219|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ892142|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ895336|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BC001403|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BX647665|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##NM_007006|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AK312721|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BX537360|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ892680|BBS2|583|Bardet-Biedl syndrome 2##DQ895923|BBS2|583|Bardet-Biedl syndrome 2##AK289604|BBS2|583|Bardet-Biedl syndrome 2##BC014140|BBS2|583|Bardet-Biedl syndrome 2##AK309068|BBS2|583|Bardet-Biedl syndrome 2##AK027635|BBS2|583|Bardet-Biedl syndrome 2##AB208905|BBS2|583|Bardet-Biedl syndrome 2##NM_031885|BBS2|583|Bardet-Biedl syndrome 2##BC113442|MT4|84560|metallothionein 4##BC113444|MT4|84560|metallothionein 4##NM_032935|MT4|84560|metallothionein 4	0.917539	CTCF.p2:-7:0.918
chr2	225148955	225149065	reg1004554.p1	5.864	+	TSC_hg19_v1_chr2_-_224904004 BC015663 AK225823 AK297588 AK312499 NM_001136528 NM_006216	-244840	-	AK295564 NM_001136530	-245670	-	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	-282382	-	BC025754 NM_001122779 NM_024785 AK026399	117720	-	AF052147 BC031844 TSC_hg19_v1_chr2_-_225370764	221718	-	U58089 TSC_hg19_v1_chr2_-_225378353	229326	-	BC015663|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK225823|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK297588|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK312499|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136528|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_006216|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##BC025754|FAM124B|79843|family with sequence similarity 124B##NM_001122779|FAM124B|79843|family with sequence similarity 124B##NM_024785|FAM124B|79843|family with sequence similarity 124B##AK026399|FAM124B|79843|family with sequence similarity 124B##AF052147|CUL3|8452|cullin 3##BC031844|CUL3|8452|cullin 3##U58089|CUL3|8452|cullin 3	0.692029	CTCF.p2:2:0.692
chr4	58029835	58030015	reg1021348.p1	5.864	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-53357	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-53393	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-53526	-	TSC_hg19_v1_chr4_+_62066948 AK309793	4037050	+	NM_015236	4332913	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	7245171	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.680208	CTCF.p2:-4:0.680
chr7	143724247	143724404	reg1025613.p1	5.864	+	BC137042 BC137047 NM_001005281	-23270	+	BC104975 NM_012369	-67306	+	BC136812 BC136813 NM_001004685	-92034	+	BC136858 BC136860 NM_012365	23152	+	BC136814 BC136829 NM_001004488	46968	+	BC136902 BC136903 NM_001004135	67845	+	BC137042|OR6B1|135946|olfactory receptor, family 6, subfamily B, member 1##BC137047|OR6B1|135946|olfactory receptor, family 6, subfamily B, member 1##NM_001005281|OR6B1|135946|olfactory receptor, family 6, subfamily B, member 1##BC104975|OR2F1|26211|olfactory receptor, family 2, subfamily F, member 1##NM_012369|OR2F1|26211|olfactory receptor, family 2, subfamily F, member 1##BC136812|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##BC136813|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##NM_001004685|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##BC136858|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5##BC136860|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5##NM_012365|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5##BC136814|OR2A25|392138|olfactory receptor, family 2, subfamily A, member 25##BC136829|OR2A25|392138|olfactory receptor, family 2, subfamily A, member 25##NM_001004488|OR2A25|392138|olfactory receptor, family 2, subfamily A, member 25##BC136902|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##BC136903|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##NM_001004135|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12	0.989851	CTCF.p2:47:0.990
chr2	136928935	136929066	reg1027373.p1	5.863	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-53324	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-55202	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-185784	-	TSC_hg19_v1_chr2_+_137523114 AK299929	594116	+	NM_001080427	819461	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1792934	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.054001	
chr2	142669367	142669510	reg1026961.p1	5.863	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-3131632	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-3409948	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-3410045	+	TSC_hg19_v1_chr2_-_142888540 AK054663	219118	-	AF176832 NM_018557	219831	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	965768	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.998425	CTCF.p2:15:0.998
chr2	75468989	75469117	reg1028266.p1	5.863	+	AK289765 NM_001058 NM_015727	-42425	-	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-283268	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-406802	-	BC016157 TSC_hg19_v1_chr2_-_75788066	318994	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	319037	-	AK023453 NM_032181	327794	-	AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A	0.886785	CTCF.p2:1:0.887
chr7	44058760	44058872	reg1025095.p1	5.863	+	TSC_hg19_v1_chr7_-_44058749 BC062722 BX537878 BX538054 BC017341 BC017250 BC105584 AK296066	-39	-	AF412027 NM_175064	-18329	+	TSC_hg19_v1_chr7_+_43966046 NM_015983 BC004104 AK001446 AF125045 AB528947 CU678576	-92747	+	TSC_hg19_v1_chr7_+_44078680 BC081571 BC024303	19933	+	NM_001014436 NM_001122956 NM_014063 TSC_hg19_v1_chr7_+_44084271 AK293279 AK293698	25443	+	TSC_hg19_v1_chr7_+_44084300 AF077353 AK293151 AK296778 AK298102 AK302037 AF218020	25479	+	BC062722|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BX537878|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BX538054|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC017341|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC017250|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC105584|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##AK296066|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##AF412027|SPDYE1|285955|speedy homolog E1 (Xenopus laevis)##NM_175064|SPDYE1|285955|speedy homolog E1 (Xenopus laevis)##NM_015983|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##BC004104|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##AK001446|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##AF125045|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##BC081571|FLJ35390|255031|uncharacterized LOC255031##BC024303|FLJ35390|255031|uncharacterized LOC255031##NM_001014436|DBNL|28988|drebrin-like##NM_001122956|DBNL|28988|drebrin-like##NM_014063|DBNL|28988|drebrin-like##AK293279|DBNL|28988|drebrin-like##AK293698|DBNL|28988|drebrin-like##AF077353|DBNL|28988|drebrin-like##AK293151|DBNL|28988|drebrin-like##AK296778|DBNL|28988|drebrin-like##AK298102|DBNL|28988|drebrin-like##AK302037|DBNL|28988|drebrin-like##AF218020|DBNL|28988|drebrin-like	0.0	
chr12	123365450	123365552	reg1026797.p2	5.862	+	TSC_hg19_v1_chr12_+_123320050 AK298387 BC067085 NM_003959 AB014555	-45448	+	TSC_hg19_v1_chr12_+_123319294 AK090537	-46199	+	NM_201435 TSC_hg19_v1_chr12_+_123259079 BC060796 AY254201 AK097663 AK292466	-106400	+	CU675175 TSC_hg19_v1_chr12_-_123380621	15114	-	TSC_hg19_v1_chr12_-_123380645 BC005882	15138	-	TSC_hg19_v1_chr12_-_123380691 AK022812 NM_024667	15195	-	AK298387|HIP1R|9026|huntingtin interacting protein 1 related##BC067085|HIP1R|9026|huntingtin interacting protein 1 related##NM_003959|HIP1R|9026|huntingtin interacting protein 1 related##AB014555|HIP1R|9026|huntingtin interacting protein 1 related##AK090537|HIP1R|9026|huntingtin interacting protein 1 related##NM_201435|CCDC62|84660|coiled-coil domain containing 62##BC060796|CCDC62|84660|coiled-coil domain containing 62##AY254201|CCDC62|84660|coiled-coil domain containing 62##AK097663|CCDC62|84660|coiled-coil domain containing 62##AK292466|CCDC62|84660|coiled-coil domain containing 62##BC005882|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)##AK022812|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)##NM_024667|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)	0.498943	CTCF.p2:-11:0.499
chr1	236772592	236772703	reg1023963.p2	5.862	+	BC062442 TSC_hg19_v1_chr1_-_236767817 AK095692 NM_018072	-4834	-	TSC_hg19_v1_chr1_+_236687323 AK296061 BC015818 AB209914	-85318	+	NM_201544 BC016486	-85596	+	AK315250 NM_001103 TSC_hg19_v1_chr1_+_236849798 AK297886 M86406 AB209521 BC051770 BC047901 AB590561 CU690840	77215	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	185930	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	186188	+	BC062442|HEATR1|55127|HEAT repeat containing 1##AK095692|HEATR1|55127|HEAT repeat containing 1##NM_018072|HEATR1|55127|HEAT repeat containing 1##AK296061|LGALS8|3964|lectin, galactoside-binding, soluble, 8##BC015818|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AB209914|LGALS8|3964|lectin, galactoside-binding, soluble, 8##NM_201544|LGALS8|3964|lectin, galactoside-binding, soluble, 8##BC016486|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AK315250|ACTN2|88|actinin, alpha 2##NM_001103|ACTN2|88|actinin, alpha 2##AK297886|ACTN2|88|actinin, alpha 2##M86406|ACTN2|88|actinin, alpha 2##AB209521|ACTN2|88|actinin, alpha 2##BC051770|ACTN2|88|actinin, alpha 2##BC047901|ACTN2|88|actinin, alpha 2##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase	1.01624	CTCF.p2:-25:0.979
chr18	38971710	38971840	reg1025324.p1	5.862	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-1591507	-	TSC_hg19_v1_chr18_-_36915657 D28405	-2056119	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	-3825776	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	563424	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	563458	+	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	1723794	-	AK090603|LOC647946|647946|uncharacterized LOC647946##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2	0.0	
chr19	11491731	11491872	reg1017155.p1	5.862	+	BC068071 AK092438 AX747546 NM_175871 BC119677	-6428	+	AK094869 TSC_hg19_v1_chr19_+_11466173 BC009378	-25606	+	NM_001170635 NM_022737 TSC_hg19_v1_chr19_+_11466107 AK023117 AY304516 AK225482	-25686	+	M34986 AB527807 BC112153 BC143697 BC143698 BC143700 AK315097 M60459 BC019092 NM_000121	3148	-	AK074082 TSC_hg19_v1_chr19_-_11529991 BC064475 AK057147 AK293404 AK298281 BC101756 BC111958 BC143530 BC014426 NM_001035223 NM_001161616	38187	-	AK056363 BC141828 BC142637 AK294355 AK308072 NM_145045 BC036041 BC050355	54148	-	BC068071|SWSAP1|126074|SWIM-type zinc finger 7 associated protein 1##AK092438|SWSAP1|126074|SWIM-type zinc finger 7 associated protein 1##NM_175871|SWSAP1|126074|SWIM-type zinc finger 7 associated protein 1##BC119677|SWSAP1|126074|SWIM-type zinc finger 7 associated protein 1##AK094869|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##BC009378|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##NM_001170635|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##NM_022737|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##AK023117|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##AY304516|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##AK225482|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##M34986|EPOR|2057|erythropoietin receptor##BC112153|EPOR|2057|erythropoietin receptor##BC143697|EPOR|2057|erythropoietin receptor##BC143698|EPOR|2057|erythropoietin receptor##BC143700|EPOR|2057|erythropoietin receptor##AK315097|EPOR|2057|erythropoietin receptor##M60459|EPOR|2057|erythropoietin receptor##BC019092|EPOR|2057|erythropoietin receptor##NM_000121|EPOR|2057|erythropoietin receptor##BC064475|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK057147|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK293404|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK298281|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC101756|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC111958|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC143530|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC014426|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##NM_001035223|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##NM_001161616|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK056363|CCDC151|115948|coiled-coil domain containing 151##BC141828|CCDC151|115948|coiled-coil domain containing 151##BC142637|CCDC151|115948|coiled-coil domain containing 151##AK294355|CCDC151|115948|coiled-coil domain containing 151##AK308072|CCDC151|115948|coiled-coil domain containing 151##NM_145045|CCDC151|115948|coiled-coil domain containing 151##BC036041|CCDC151|115948|coiled-coil domain containing 151##BC050355|CCDC151|115948|coiled-coil domain containing 151	0.950043	CTCF.p2:86:0.934
chr22	35339986	35340086	reg1023638.p2	5.862	+	AJ007583 AB011181 NM_004737 NM_133642	-1023666	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-1885681	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-1937310	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	122113	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	313440	+	AK293694 NM_001135729	355231	+	AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)	0.95566	CTCF.p2:-7:0.956
chr22	37888960	37889088	reg1024873.p1	5.862	+	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	-6679	-	TSC_hg19_v1_chr22_-_37823515 NM_052906	-65496	-	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	-210448	+	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	26283	-	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	67449	+	M87842 BC059782 NM_006498 CR456512	86976	-	CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2##BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10##NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M87842|LGALS2|3957|lectin, galactoside-binding, soluble, 2##BC059782|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_006498|LGALS2|3957|lectin, galactoside-binding, soluble, 2##CR456512|LGALS2|3957|lectin, galactoside-binding, soluble, 2	0.636537	CTCF.p2:-11:0.637
chr14	73510014	73510080	reg1024445.p1	5.861	+	AB046809 TSC_hg19_v1_chr14_-_73493815 AJ310569 AK027399 BC014902 BC053520 NM_021260	-16216	-	AK098542 AF311602 NM_178441	-56390	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	-116912	+	TSC_hg19_v1_chr14_+_73525218 BC062440 NM_021239	15162	+	TSC_hg19_v1_chr14_+_73525252 AK026107 AL832314 BC033664 BC083496 BC111066	15201	+	BX647116 TSC_hg19_v1_chr14_+_73525273	15235	+	AB046809|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AJ310569|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AK027399|ZFYVE1|53349|zinc finger, FYVE domain containing 1##BC014902|ZFYVE1|53349|zinc finger, FYVE domain containing 1##BC053520|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_021260|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC062440|RBM25|58517|RNA binding motif protein 25##NM_021239|RBM25|58517|RNA binding motif protein 25##AK026107|RBM25|58517|RNA binding motif protein 25##AL832314|RBM25|58517|RNA binding motif protein 25##BC033664|RBM25|58517|RNA binding motif protein 25##BC083496|RBM25|58517|RNA binding motif protein 25##BC111066|RBM25|58517|RNA binding motif protein 25##BX647116|RBM25|58517|RNA binding motif protein 25	0.0	
chr20	52814656	52814758	reg1024972.p2	5.861	+	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	-24187	-	AK315220 NM_003657	-127404	-	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	-127645	-	TSC_hg19_v1_chr20_+_52824396 NM_002623	9740	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	9930	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	277507	+	L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##NM_002623|PFDN4|5203|prefoldin subunit 4##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5	0.979308	CTCF.p2:20:0.979
chr3	48514666	48514846	reg1023346.p2	5.861	+	TSC_hg19_v1_chr3_-_48514495 AB097007 BC020279 AL117413 AK310083 AL832568 AF151051 BC001463 AK027728 AK298799	-225	-	TSC_hg19_v1_chr3_+_48507641 AK315196 BC023630	-7110	+	BC019863 TSC_hg19_v1_chr3_+_48507228 NM_016381 NM_033629 AF151105 AJ243797	-7477	+	AK124652 TSC_hg19_v1_chr3_-_48541588 AB527510 AK075441 AF520698 NM_016479	26818	-	DQ891635 DQ894825 BC010269 NM_004567 AF108765 D49818 TSC_hg19_v1_chr3_-_48594237 AK299097 AK312623 AY707863 AY714243 AY756062 AY756063 AY756064	79509	-	TSC_hg19_v1_chr3_-_48598563 AK298732	83801	-	AB097007|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC020279|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL117413|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL832568|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF151051|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC001463|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK298799|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK315196|TREX1|11277|three prime repair exonuclease 1##BC023630|TREX1|11277|three prime repair exonuclease 1##BC019863|TREX1|11277|three prime repair exonuclease 1##NM_016381|TREX1|11277|three prime repair exonuclease 1##NM_033629|TREX1|11277|three prime repair exonuclease 1##AF151105|TREX1|11277|three prime repair exonuclease 1##AJ243797|TREX1|11277|three prime repair exonuclease 1##AK124652|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK075441|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF520698|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##NM_016479|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##DQ891635|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##DQ894825|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##BC010269|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##NM_004567|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AF108765|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##D49818|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK299097|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK312623|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY707863|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY714243|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756062|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756063|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756064|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK298732|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	0.063447	
chr9	10060475	10060655	reg1022000.p2	5.861	+	TSC_hg19_v1_chr9_+_8858136 AK094342	-1202432	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-1326646	-	TSC_hg19_v1_chr9_+_8713275 AY779046	-1347273	+	BC028038 NM_002839	552157	-	NM_000550 X51420 BC052608	2632860	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	2714451	+	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##AY779046|RPL18A|6142|ribosomal protein L18a##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150	0.999838	CTCF.p2:-48:1.000
chrX	70331429	70331609	reg1024706.p1	5.861	+	AB102794 AB102797 AB102793 AB102795 CU677147 DQ895451 EU176337 TSC_hg19_v1_chrX_-_70331422 AB463801 BC014972 BC071710 D11086 AK314932 AK298656 NM_000206	-131	-	NM_001025265	-4882	-	TSC_hg19_v1_chrX_+_70316026 NM_001170931 NM_005938 AK300142 X93996 BC106761 AB463650 AF384029	-15512	+	TSC_hg19_v1_chrX_+_70338445 AK302543 NM_005120 AF071309	6985	+	NM_001166660 NM_018977 NM_181303 BX641059 TSC_hg19_v1_chrX_+_70364698 BC028738 AK299669	33170	+	TSC_hg19_v1_chrX_+_70364710 AF217411 AX773948 AX773949	33194	+	AB102794|IL2RG|3561|interleukin 2 receptor, gamma##AB102797|IL2RG|3561|interleukin 2 receptor, gamma##AB102793|IL2RG|3561|interleukin 2 receptor, gamma##AB102795|IL2RG|3561|interleukin 2 receptor, gamma##DQ895451|IL2RG|3561|interleukin 2 receptor, gamma##EU176337|IL2RG|3561|interleukin 2 receptor, gamma##BC014972|IL2RG|3561|interleukin 2 receptor, gamma##BC071710|IL2RG|3561|interleukin 2 receptor, gamma##D11086|IL2RG|3561|interleukin 2 receptor, gamma##AK314932|IL2RG|3561|interleukin 2 receptor, gamma##AK298656|IL2RG|3561|interleukin 2 receptor, gamma##NM_000206|IL2RG|3561|interleukin 2 receptor, gamma##NM_001025265|CXorf65|158830|chromosome X open reading frame 65##NM_001170931|FOXO4|4303|forkhead box O4##NM_005938|FOXO4|4303|forkhead box O4##X93996|FOXO4|4303|forkhead box O4##BC106761|FOXO4|4303|forkhead box O4##AF384029|FOXO4|4303|forkhead box O4##AK302543|MED12|9968|mediator complex subunit 12##NM_005120|MED12|9968|mediator complex subunit 12##AF071309|MED12|9968|mediator complex subunit 12##NM_001166660|NLGN3|54413|neuroligin 3##NM_018977|NLGN3|54413|neuroligin 3##NM_181303|NLGN3|54413|neuroligin 3##BX641059|NLGN3|54413|neuroligin 3##BC028738|NLGN3|54413|neuroligin 3##AK299669|NLGN3|54413|neuroligin 3##AF217411|NLGN3|54413|neuroligin 3	0.0	
chr11	1876376	1876497	reg1024447.p1	5.860	+	NM_002339 TSC_hg19_v1_chr11_+_1874296 AK222733 BC001785 X55188 AK290279 S67783 CR541728 CR541754 CU674886	-2150	+	NM_001145841	-15005	+	BC032148 NM_001145829	-15718	+	AK092071 AX747343 NM_001242932	9958	+	NM_001013253	13466	+	NM_001013254 NM_001013255	15689	+	NM_002339|LSP1|4046|lymphocyte-specific protein 1##AK222733|LSP1|4046|lymphocyte-specific protein 1##BC001785|LSP1|4046|lymphocyte-specific protein 1##X55188|LSP1|4046|lymphocyte-specific protein 1##AK290279|LSP1|4046|lymphocyte-specific protein 1##S67783|LSP1|4046|lymphocyte-specific protein 1##CR541728|LSP1|4046|lymphocyte-specific protein 1##CR541754|LSP1|4046|lymphocyte-specific protein 1##NM_001145841|TNNI2|7136|troponin I type 2 (skeletal, fast)##BC032148|TNNI2|7136|troponin I type 2 (skeletal, fast)##NM_001145829|TNNI2|7136|troponin I type 2 (skeletal, fast)##AK092071|LSP1|4046|lymphocyte-specific protein 1##NM_001242932|LSP1|4046|lymphocyte-specific protein 1##NM_001013253|LSP1|4046|lymphocyte-specific protein 1##NM_001013254|LSP1|4046|lymphocyte-specific protein 1##NM_001013255|LSP1|4046|lymphocyte-specific protein 1	0.0	
chr1	3566539	3566698	reg1020476.p1	5.860	+	CU678066 AB034912 AK000437 AK225525 BC002611 BC086311 TSC_hg19_v1_chr1_-_3566668 AK302397 NM_017818	-2	-	AK298343 TSC_hg19_v1_chr1_+_3541608 AK289919 BC019034	-25009	+	TSC_hg19_v1_chr1_+_3541565 NM_182752 AK096427	-25054	+	TSC_hg19_v1_chr1_+_3569108 BC117251 BC117253 NM_001204184 NM_001204185 NM_001204186 NM_001204187 NM_001204188 NM_005427 Y11416	2508	+	TSC_hg19_v1_chr1_+_3607235 AB055065 AB055066 AY040827 AY040828 AY040829 NM_001126240 NM_001126241 NM_001126242 NM_001204189 NM_001204190 NM_001204191 AK304177 AK304784	40640	+	AK310432 NM_001204192 AK302118	47997	+	AB034912|WRAP73|49856|WD repeat containing, antisense to TP73##AK000437|WRAP73|49856|WD repeat containing, antisense to TP73##AK225525|WRAP73|49856|WD repeat containing, antisense to TP73##BC002611|WRAP73|49856|WD repeat containing, antisense to TP73##BC086311|WRAP73|49856|WD repeat containing, antisense to TP73##AK302397|WRAP73|49856|WD repeat containing, antisense to TP73##NM_017818|WRAP73|49856|WD repeat containing, antisense to TP73##AK298343|TPRG1L|127262|tumor protein p63 regulated 1-like##AK289919|TPRG1L|127262|tumor protein p63 regulated 1-like##BC019034|TPRG1L|127262|tumor protein p63 regulated 1-like##NM_182752|TPRG1L|127262|tumor protein p63 regulated 1-like##AK096427|TPRG1L|127262|tumor protein p63 regulated 1-like##BC117251|TP73|7161|tumor protein p73##BC117253|TP73|7161|tumor protein p73##NM_001204184|TP73|7161|tumor protein p73##NM_001204185|TP73|7161|tumor protein p73##NM_001204186|TP73|7161|tumor protein p73##NM_001204187|TP73|7161|tumor protein p73##NM_001204188|TP73|7161|tumor protein p73##NM_005427|TP73|7161|tumor protein p73##Y11416|TP73|7161|tumor protein p73##AB055065|TP73|7161|tumor protein p73##AB055066|TP73|7161|tumor protein p73##AY040827|TP73|7161|tumor protein p73##AY040828|TP73|7161|tumor protein p73##AY040829|TP73|7161|tumor protein p73##NM_001126240|TP73|7161|tumor protein p73##NM_001126241|TP73|7161|tumor protein p73##NM_001126242|TP73|7161|tumor protein p73##NM_001204189|TP73|7161|tumor protein p73##NM_001204190|TP73|7161|tumor protein p73##NM_001204191|TP73|7161|tumor protein p73##AK304177|TP73|7161|tumor protein p73##AK304784|TP73|7161|tumor protein p73##AK310432|TP73|7161|tumor protein p73##NM_001204192|TP73|7161|tumor protein p73##AK302118|TP73|7161|tumor protein p73	0.0	
chr20	18609143	18609237	reg1023437.p1	5.860	+	TSC_hg19_v1_chr20_+_18568661 NM_080820 BC045167 AK074304 BC100923 BC100924 BC100925 BC100926 AK291440 AF332356 CU692252	-40540	+	BC092494 AK024594 BC015983 TSC_hg19_v1_chr20_+_18548094 BC039422 BC127753 BC127754 BC141963 BC141964 BC150559 BC150560 AF147354	-61090	+	TSC_hg19_v1_chr20_+_18488583 AK299171 BC001575 AK299513 NM_001172745 BC005404	-120564	+	AF418568 AF418570 AX721297 NM_178483 AK130970 AY248902 BC105121 BC112024	185208	+	NM_001242671	201648	-	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	584095	+	NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC092494|LINC00493|388789|long intergenic non-protein coding RNA 493##AK024594|LINC00493|388789|long intergenic non-protein coding RNA 493##BC015983|LINC00493|388789|long intergenic non-protein coding RNA 493##BC039422|LINC00493|388789|long intergenic non-protein coding RNA 493##BC127753|LINC00493|388789|long intergenic non-protein coding RNA 493##BC127754|LINC00493|388789|long intergenic non-protein coding RNA 493##BC141963|LINC00493|388789|long intergenic non-protein coding RNA 493##BC141964|LINC00493|388789|long intergenic non-protein coding RNA 493##BC150559|LINC00493|388789|long intergenic non-protein coding RNA 493##BC150560|LINC00493|388789|long intergenic non-protein coding RNA 493##AF147354|LINC00493|388789|long intergenic non-protein coding RNA 493##AK299171|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC001575|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AK299513|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_001172745|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC005404|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AF418568|C20orf79|140856|chromosome 20 open reading frame 79##AF418570|C20orf79|140856|chromosome 20 open reading frame 79##NM_178483|C20orf79|140856|chromosome 20 open reading frame 79##AK130970|C20orf79|140856|chromosome 20 open reading frame 79##AY248902|C20orf79|140856|chromosome 20 open reading frame 79##BC105121|C20orf79|140856|chromosome 20 open reading frame 79##BC112024|C20orf79|140856|chromosome 20 open reading frame 79##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3	0.182105	
chr6	44225396	44225576	reg1023653.p1	5.860	+	AK307572 AY491520 DQ893314 DQ896628 DQ896632 EU176354 AB106538 TSC_hg19_v1_chr6_-_44225250 AK075456 AB097021 AB097039 AK123749 AK293344 BC024288 AK293251 NM_178148	-321	-	BC014485 TSC_hg19_v1_chr6_+_44214855 BC007327 AL136543	-10613	+	TSC_hg19_v1_chr6_+_44214837 BC068474 AK312255 AY359878 BC016753 AK294643 AK297367 D28342 BX649079 BC004928 BC012807 M16660 NM_007355	-10669	+	TSC_hg19_v1_chr6_-_44233257 BC011676 BC063609 AK301360	7778	-	AB590964 NM_004556 U91616	8025	-	NM_001137560 TSC_hg19_v1_chr6_+_44238533 BC040881	13045	+	AK307572|SLC35B2|347734|solute carrier family 35, member B2##AY491520|SLC35B2|347734|solute carrier family 35, member B2##DQ893314|SLC35B2|347734|solute carrier family 35, member B2##DQ896628|SLC35B2|347734|solute carrier family 35, member B2##DQ896632|SLC35B2|347734|solute carrier family 35, member B2##EU176354|SLC35B2|347734|solute carrier family 35, member B2##AB106538|SLC35B2|347734|solute carrier family 35, member B2##AK075456|SLC35B2|347734|solute carrier family 35, member B2##AB097021|SLC35B2|347734|solute carrier family 35, member B2##AB097039|SLC35B2|347734|solute carrier family 35, member B2##AK123749|SLC35B2|347734|solute carrier family 35, member B2##AK293344|SLC35B2|347734|solute carrier family 35, member B2##BC024288|SLC35B2|347734|solute carrier family 35, member B2##AK293251|SLC35B2|347734|solute carrier family 35, member B2##NM_178148|SLC35B2|347734|solute carrier family 35, member B2##BC014485|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC007327|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AL136543|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC068474|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK312255|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AY359878|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC016753|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK294643|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK297367|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BX649079|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC004928|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC012807|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##M16660|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##NM_007355|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC011676|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##BC063609|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##AK301360|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##NM_004556|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##U91616|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##NM_001137560|TMEM151B|441151|transmembrane protein 151B	0.990946	CTCF.p2:30:0.991
chr14	55189675	55189775	reg1023469.p2	5.859	+	TSC_hg19_v1_chr14_+_55168831 AB028976	-20836	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	-155089	+	NM_001161576 NM_015589 BC057838 TSC_hg19_v1_chr14_+_55034359	-155381	+	NM_001161577 BC021726	31802	+	AY137463 AY137464 AY137465 Z16418 S44049 CR536551 DQ892998 DQ896245 S43856 S44053 TSC_hg19_v1_chr14_-_55369545 Z29433 Z29434 U66095 BC025415 U19523 U66097 NM_000161 NM_001024024 NM_001024070 NM_001024071	179689	-	TSC_hg19_v1_chr14_-_55493780 BC000622 BC005040 AK293005 BC063041	304060	-	AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A##AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_001161576|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_015589|SAMD4A|23034|sterile alpha motif domain containing 4A##BC057838|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_001161577|SAMD4A|23034|sterile alpha motif domain containing 4A##BC021726|SAMD4A|23034|sterile alpha motif domain containing 4A##AY137463|GCH1|2643|GTP cyclohydrolase 1##AY137464|GCH1|2643|GTP cyclohydrolase 1##AY137465|GCH1|2643|GTP cyclohydrolase 1##Z16418|GCH1|2643|GTP cyclohydrolase 1##S44049|GCH1|2643|GTP cyclohydrolase 1##CR536551|GCH1|2643|GTP cyclohydrolase 1##DQ892998|GCH1|2643|GTP cyclohydrolase 1##DQ896245|GCH1|2643|GTP cyclohydrolase 1##S43856|GCH1|2643|GTP cyclohydrolase 1##S44053|GCH1|2643|GTP cyclohydrolase 1##Z29433|GCH1|2643|GTP cyclohydrolase 1##Z29434|GCH1|2643|GTP cyclohydrolase 1##U66095|GCH1|2643|GTP cyclohydrolase 1##BC025415|GCH1|2643|GTP cyclohydrolase 1##U19523|GCH1|2643|GTP cyclohydrolase 1##U66097|GCH1|2643|GTP cyclohydrolase 1##NM_000161|GCH1|2643|GTP cyclohydrolase 1##NM_001024024|GCH1|2643|GTP cyclohydrolase 1##NM_001024070|GCH1|2643|GTP cyclohydrolase 1##NM_001024071|GCH1|2643|GTP cyclohydrolase 1##BC000622|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC005040|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##AK293005|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC063041|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1	0.0	
chr1	5574754	5574844	reg1022268.p1	5.859	+	AY282806 NM_001042478 NM_018836	-859695	+	TSC_hg19_v1_chr1_+_4714668 AF175409	-860070	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-1757954	-	NM_001199861	477558	+	TSC_hg19_v1_chr1_-_6052456 AY118228	477646	-	TSC_hg19_v1_chr1_-_6052507 AK124074 AK314326 AF537130 BC040520 NM_015102	477710	-	AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##AF175409|AJAP1|55966|adherens junctions associated protein 1##BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AY118228|NPHP4|261734|nephronophthisis 4##AK124074|NPHP4|261734|nephronophthisis 4##AK314326|NPHP4|261734|nephronophthisis 4##AF537130|NPHP4|261734|nephronophthisis 4##BC040520|NPHP4|261734|nephronophthisis 4##NM_015102|NPHP4|261734|nephronophthisis 4	0.0	
chr17	45741843	45741942	reg1024412.p1	5.859	+	TSC_hg19_v1_chr17_+_45727579 DQ892863 DQ896112 AB384802 BT009797	-14308	+	BC036703 TSC_hg19_v1_chr17_+_45727323 AK314780 BC003572 BC024045	-14547	+	L38951 NM_002265 TSC_hg19_v1_chr17_+_45727284	-14608	+	AB018318 BC152407 BC167150 NM_014726	30737	+	TSC_hg19_v1_chr17_+_45773067 BC111418	31147	+	TSC_hg19_v1_chr17_+_45773425 AB383985	31557	+	DQ892863|KPNB1|3837|karyopherin (importin) beta 1##DQ896112|KPNB1|3837|karyopherin (importin) beta 1##BT009797|KPNB1|3837|karyopherin (importin) beta 1##BC036703|KPNB1|3837|karyopherin (importin) beta 1##AK314780|KPNB1|3837|karyopherin (importin) beta 1##BC003572|KPNB1|3837|karyopherin (importin) beta 1##BC024045|KPNB1|3837|karyopherin (importin) beta 1##L38951|KPNB1|3837|karyopherin (importin) beta 1##NM_002265|KPNB1|3837|karyopherin (importin) beta 1##AB018318|TBKBP1|9755|TBK1 binding protein 1##BC152407|TBKBP1|9755|TBK1 binding protein 1##BC167150|TBKBP1|9755|TBK1 binding protein 1##NM_014726|TBKBP1|9755|TBK1 binding protein 1##BC111418|TBKBP1|9755|TBK1 binding protein 1	0.995215	CTCF.p2:-10:0.995
chr17	6905047	6905148	reg1024863.p1	5.859	+	M62982 NM_000697 M35418 M58704 BC069557 AB590844	-5690	+	AF357879 AK292818 AK304345 BC014599 NM_053285	-170064	-	NM_153230 BC034782	-225536	+	NM_001004333	10638	+	AK289930 TSC_hg19_v1_chr17_+_6915955 BC036317 BC051802 BC062705 BC095436 AM746459	10863	+	TSC_hg19_v1_chr17_+_6915973 BC040148	10878	+	M62982|ALOX12|239|arachidonate 12-lipoxygenase##NM_000697|ALOX12|239|arachidonate 12-lipoxygenase##M35418|ALOX12|239|arachidonate 12-lipoxygenase##M58704|ALOX12|239|arachidonate 12-lipoxygenase##BC069557|ALOX12|239|arachidonate 12-lipoxygenase##AF357879|TEKT1|83659|tektin 1##AK292818|TEKT1|83659|tektin 1##AK304345|TEKT1|83659|tektin 1##BC014599|TEKT1|83659|tektin 1##NM_053285|TEKT1|83659|tektin 1##NM_153230|FBXO39|162517|F-box protein 39##BC034782|FBXO39|162517|F-box protein 39##NM_001004333|RNASEK|440400|ribonuclease, RNase K##AK289930|RNASEK|440400|ribonuclease, RNase K##BC036317|RNASEK|440400|ribonuclease, RNase K##BC051802|RNASEK|440400|ribonuclease, RNase K##BC062705|RNASEK|440400|ribonuclease, RNase K##BC095436|RNASEK|440400|ribonuclease, RNase K##AM746459|RNASEK|440400|ribonuclease, RNase K##BC040148|RNASEK-C17ORF49|100529209|RNASEK-C17orf49 readthrough	0.036819	
chr2	16799243	16799384	reg1024515.p1	5.859	+	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-717146	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-717318	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	-717540	-	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	47831	-	DQ860102 NM_001099218	900392	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	922574	+	BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1	0.021022	
chr5	83007950	83008050	reg1024376.p2	5.859	+	NM_001126336 NM_001164097 NM_001164098 NM_004385 TSC_hg19_v1_chr5_+_82767562 U16306 U26555 X15998 AK307642 AB209491 BC050524 D32039	-240383	+	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	-634617	+	TSC_hg19_v1_chr5_-_82373255 NM_174909	-634738	-	AK313713 NM_001884 X17405 X78076 X78075	8934	-	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	672246	-	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	672664	-	NM_001126336|VCAN|1462|versican##NM_001164097|VCAN|1462|versican##NM_001164098|VCAN|1462|versican##NM_004385|VCAN|1462|versican##U16306|VCAN|1462|versican##U26555|VCAN|1462|versican##X15998|VCAN|1462|versican##AK307642|VCAN|1462|versican##AB209491|VCAN|1462|versican##BC050524|VCAN|1462|versican##D32039|VCAN|1462|versican##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_174909|TMEM167A|153339|transmembrane protein 167A##AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3	0.960568	CTCF.p2:6:0.961
chr20	35515475	35515656	reg1002505.p1	5.858	+	TSC_hg19_v1_chr20_+_35504544 BC127688 BC130646 BC130648 AK123544 NM_080628 HQ258755	-11016	+	TSC_hg19_v1_chr20_-_35492072 NM_080627	-23431	-	AK126630 NM_199181	-27290	-	AB013847 CU690348 TSC_hg19_v1_chr20_-_35580085 BC036450 AK304187 AB208944	64507	-	TSC_hg19_v1_chr20_-_35580112 AK304795 AL050267	64548	-	AF228421 AK315169 TSC_hg19_v1_chr20_-_35580179	64612	-	BC127688|C20orf118|140711|chromosome 20 open reading frame 118##BC130646|C20orf118|140711|chromosome 20 open reading frame 118##BC130648|C20orf118|140711|chromosome 20 open reading frame 118##AK123544|C20orf118|140711|chromosome 20 open reading frame 118##NM_080628|C20orf118|140711|chromosome 20 open reading frame 118##HQ258755|C20orf118|140711|chromosome 20 open reading frame 118##NM_080627|KIAA0889|140710|KIAA0889##AK126630|KIAA0889|140710|KIAA0889##NM_199181|KIAA0889|140710|KIAA0889##AB013847|SAMHD1|25939|SAM domain and HD domain 1##BC036450|SAMHD1|25939|SAM domain and HD domain 1##AK304187|SAMHD1|25939|SAM domain and HD domain 1##AB208944|SAMHD1|25939|SAM domain and HD domain 1##AK304795|SAMHD1|25939|SAM domain and HD domain 1##AL050267|SAMHD1|25939|SAM domain and HD domain 1##AF228421|SAMHD1|25939|SAM domain and HD domain 1##AK315169|SAMHD1|25939|SAM domain and HD domain 1	0.0	
chr5	77616441	77616577	reg1022545.p1	5.858	+	TSC_hg19_v1_chr5_-_77590517 BC020230 BX538041 BC038444 AK291201 NM_003664	-25995	-	TSC_hg19_v1_chr5_-_77590495 U81504	-26017	-	TSC_hg19_v1_chr5_-_77590488 AY623424 AK303300	-26032	-	BC039455 TSC_hg19_v1_chr5_-_77656182	39672	-	TSC_hg19_v1_chr5_-_77656217 AK129849	39706	-	NM_004866 TSC_hg19_v1_chr5_+_77656440 AF038966 AK304452 AK225172 BC009787 BC015065 AK298146 BC034048 AK290225 CR542286 CU677209	39907	+	BC020230|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##BX538041|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##BC038444|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK291201|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##NM_003664|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U81504|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AY623424|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK303300|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK129849|LOC728769|728769|uncharacterized LOC728769##NM_004866|SCAMP1|9522|secretory carrier membrane protein 1##AF038966|SCAMP1|9522|secretory carrier membrane protein 1##AK304452|SCAMP1|9522|secretory carrier membrane protein 1##AK225172|SCAMP1|9522|secretory carrier membrane protein 1##BC009787|SCAMP1|9522|secretory carrier membrane protein 1##BC015065|SCAMP1|9522|secretory carrier membrane protein 1##AK298146|SCAMP1|9522|secretory carrier membrane protein 1##BC034048|SCAMP1|9522|secretory carrier membrane protein 1##AK290225|SCAMP1|9522|secretory carrier membrane protein 1##CR542286|SCAMP1|9522|secretory carrier membrane protein 1	0.0	
chr9	36597564	36597657	reg1021122.p1	5.858	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-24686	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-196435	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-196713	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	436806	-	TSC_hg19_v1_chr9_+_37079908 AK091718	482296	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	482398	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.03817	
chr15	101475101	101475282	reg1024608.p2	5.857	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-15679	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-15717	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-55120	+	AB071402 TSC_hg19_v1_chr15_-_101791795	316545	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	316944	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	342472	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.949107	CTCF.p2:-20:0.936
chr3	131725594	131725692	reg1022155.p1	5.857	+	TSC_hg19_v1_chr3_-_131221816 CR456720 CU678442 BC002345 X06323 BC003375 AK301377 AK296626 NM_007208	-503889	-	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	-624992	+	TSC_hg19_v1_chr3_+_131080737 AK000532 BC015593	-644900	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	28197	-	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	310595	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	310645	+	CR456720|MRPL3|11222|mitochondrial ribosomal protein L3##X06323|MRPL3|11222|mitochondrial ribosomal protein L3##BC003375|MRPL3|11222|mitochondrial ribosomal protein L3##AK301377|MRPL3|11222|mitochondrial ribosomal protein L3##AK296626|MRPL3|11222|mitochondrial ribosomal protein L3##NM_007208|MRPL3|11222|mitochondrial ribosomal protein L3##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK000532|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##BC015593|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate	0.026959	
chr5	344619	344799	reg1024116.p2	5.857	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-40419	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-72904	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-72941	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	98521	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	98641	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	128403	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.0	
chr8	53490430	53490547	reg1023720.p2	5.857	+	BC130641 BC130643 BC144534 AY358213 NM_207413	-12495	-	BC026316 AB011107 AK311188 BC031075 NM_014682 BC025662	-168168	-	AK299452 TSC_hg19_v1_chr8_+_52812239	-678265	+	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	136498	-	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	136525	-	BC069117 BC107101 NM_005285	361979	+	BC130641|FAM150A|389658|family with sequence similarity 150, member A##BC130643|FAM150A|389658|family with sequence similarity 150, member A##BC144534|FAM150A|389658|family with sequence similarity 150, member A##AY358213|FAM150A|389658|family with sequence similarity 150, member A##NM_207413|FAM150A|389658|family with sequence similarity 150, member A##AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1	0.958108	CTCF.p2:-11:0.958
chr10	116463502	116463630	reg1023291.p1	5.856	+	TSC_hg19_v1_chr10_-_116444374 NM_001003407 NM_001003408	-19173	-	AB462929 TSC_hg19_v1_chr10_-_116444183 D31883	-19403	-	AF005654 NM_002313	-45510	-	TSC_hg19_v1_chr10_-_116528049 AK057834	64442	-	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	117983	+	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	234397	+	NM_001003407|ABLIM1|3983|actin binding LIM protein 1##NM_001003408|ABLIM1|3983|actin binding LIM protein 1##D31883|ABLIM1|3983|actin binding LIM protein 1##AF005654|ABLIM1|3983|actin binding LIM protein 1##NM_002313|ABLIM1|3983|actin binding LIM protein 1##AK057834|ABLIM1|3983|actin binding LIM protein 1##BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)	0.987516	CTCF.p2:39:0.988
chr6	24431373	24431521	reg1025843.p1	5.856	+	TSC_hg19_v1_chr6_+_24403163 NM_020662 AK297418 AK299825 AF288288 BC069009 AK054587 AK291058 AK298849 BC001028 BC018833 AF293076 CU686695	-28239	+	BC050704 NM_001195610	-47928	-	AF181721 NM_016356	-73168	-	L11702 CU676688 AY007546 BC093645 BC112001 L11701 AK310692 BC020748 NM_177483 AJ308108 NM_001503	58346	-	TSC_hg19_v1_chr6_+_24495080 AK290800 AK294699 AK315380	63631	+	TSC_hg19_v1_chr6_+_24495196 AK314357 BC034321 NM_001080 NM_170740 DQ891671 DQ894857 AJ427355 Y11192	63748	+	NM_020662|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK297418|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK299825|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AF288288|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC069009|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK054587|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK291058|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK298849|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC001028|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC018833|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AF293076|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC050704|DCDC2|51473|doublecortin domain containing 2##NM_001195610|DCDC2|51473|doublecortin domain containing 2##AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2##L11702|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AY007546|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC093645|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC112001|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##L11701|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310692|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC020748|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_177483|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AJ308108|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_001503|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK290800|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK294699|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK315380|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK314357|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##BC034321|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_001080|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_170740|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ891671|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ894857|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AJ427355|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##Y11192|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1	0.998769	CTCF.p2:-23:0.999
chr12	107301342	107301450	reg1023830.p1	5.855	+	TSC_hg19_v1_chr12_+_107168357 NM_018157 BC132689 BC144056 BC034220 AK001482 AY221116	-132934	+	BC028582 NM_032491 AF332192 AK315698 BC030644 CU688514 CU688962 DQ890831 DQ893986	-222863	+	NM_001206691 AB095365 AK302837 AB044245	-306465	+	TSC_hg19_v1_chr12_+_107349591 NM_152261	48201	+	AK024021 TSC_hg19_v1_chr12_+_107349684 AK001731 BC020522 AK022770	48312	+	TSC_hg19_v1_chr12_-_107380925 BC036066 BC068468 AK222558 AY008301 BC050361 BC025984 AK024124 NM_001033050 NM_025198	79502	-	NM_018157|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC132689|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC144056|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC034220|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AK001482|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AY221116|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC028582|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_032491|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AF332192|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK315698|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##BC030644|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ890831|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ893986|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_001206691|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095365|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK302837|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB044245|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_152261|C12orf23|90488|chromosome 12 open reading frame 23##AK024021|C12orf23|90488|chromosome 12 open reading frame 23##AK001731|C12orf23|90488|chromosome 12 open reading frame 23##BC020522|C12orf23|90488|chromosome 12 open reading frame 23##AK022770|C12orf23|90488|chromosome 12 open reading frame 23##BC036066|MTERFD3|80298|MTERF domain containing 3##BC068468|MTERFD3|80298|MTERF domain containing 3##AK222558|MTERFD3|80298|MTERF domain containing 3##AY008301|MTERFD3|80298|MTERF domain containing 3##BC050361|MTERFD3|80298|MTERF domain containing 3##BC025984|MTERFD3|80298|MTERF domain containing 3##AK024124|MTERFD3|80298|MTERF domain containing 3##NM_001033050|MTERFD3|80298|MTERF domain containing 3##NM_025198|MTERFD3|80298|MTERF domain containing 3	0.28855	CTCF.p2:-6:0.289
chr13	41351464	41351606	reg1010456.p1	5.855	+	TSC_hg19_v1_chr13_-_41345327 NM_005830	-6203	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	-6243	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	-110823	-	NM_014252 TSC_hg19_v1_chr13_+_41363596 BC002702	12054	+	TSC_hg19_v1_chr13_+_41363716 AK313602 AK296862 AF112968	12149	+	AF177333 TSC_hg19_v1_chr13_+_41363756	12231	+	NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##NM_014252|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##BC002702|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK313602|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK296862|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AF112968|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AF177333|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15	0.965125	CTCF.p2:-13:0.965
chr22	21738542	21738693	reg1025144.p1	5.855	+	NM_001128635	-578	+	NM_001128633	-955	+	BC062565 AJ000730 BC008814 NM_004173 TSC_hg19_v1_chr22_-_21386851	-351766	-	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	33059	+	NM_001207052	82841	+	NM_001128635	166755	-	NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##BC062565|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AJ000730|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC008814|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_004173|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2##NM_001207052|TMEM191C|645426|transmembrane protein 191C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B	0.042788	
chr3	12521289	12521459	reg1000990.p1	5.855	+	TSC_hg19_v1_chr3_+_12392993 NM_015869 U79012 AB451337 AB451486 U63415 AJ563369	-128312	+	AB097931 AB107271 AB472042 NM_138711 TSC_hg19_v1_chr3_+_12330568 BC006811 AJ563370	-190902	+	TSC_hg19_v1_chr3_+_12329422 NM_005037 NM_138712 X90563 AK290581	-191918	+	NM_001145393 NM_001145394 AK225875 TSC_hg19_v1_chr3_+_12525957	4569	+	TSC_hg19_v1_chr3_+_12525987 AK074794 AK027821 NM_001145392 NM_001145395 NM_025265 BC004178 BC004211 BC019582 AK300449 AK295508	4637	+	AK291183 TSC_hg19_v1_chr3_+_12526242	4862	+	NM_015869|PPARG|5468|peroxisome proliferator-activated receptor gamma##U79012|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB451337|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB451486|PPARG|5468|peroxisome proliferator-activated receptor gamma##U63415|PPARG|5468|peroxisome proliferator-activated receptor gamma##AJ563369|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB097931|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB107271|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB472042|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138711|PPARG|5468|peroxisome proliferator-activated receptor gamma##BC006811|PPARG|5468|peroxisome proliferator-activated receptor gamma##AJ563370|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_005037|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138712|PPARG|5468|peroxisome proliferator-activated receptor gamma##X90563|PPARG|5468|peroxisome proliferator-activated receptor gamma##AK290581|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_001145393|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_001145394|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK225875|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK074794|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK027821|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_001145392|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_001145395|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_025265|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##BC004178|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##BC004211|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##BC019582|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK300449|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK295508|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK291183|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)	0.0	
chr5	23209130	23209265	reg1025259.p1	5.855	+	L33477 NM_004061	-355467	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-355751	-	TSC_hg19_v1_chr5_-_22212879 AK314800	-996316	-	DQ388610 NM_020227 AK301776	298546	+	NM_006727	1435887	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	3829474	-	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	0.988784	CTCF.p2:2:0.989
chr10	91847172	91847275	reg1022583.p2	5.854	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-348456	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-385848	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-441899	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	770223	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	770510	-	TSC_hg19_v1_chr10_+_92631241 BC006991	784034	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.0	
chr1	26124624	26124729	reg1024059.p2	5.854	+	AB209275 TSC_hg19_v1_chr1_+_25944698	-180021	+	AF261655 NM_020379	-180718	+	TSC_hg19_v1_chr1_+_25870146 BC029770 AL117654 AB528624	-254512	+	TSC_hg19_v1_chr1_+_26126678 AJ306399 NM_020451 NM_206926	1992	+	TSC_hg19_v1_chr1_+_26146429 NM_001099625 NM_001099627 BX647921	21734	+	TSC_hg19_v1_chr1_+_26146468 AB075880 AK314297 AK299221 AF173891	21795	+	AB209275|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##BC029770|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AL117654|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AJ306399|SEPN1|57190|selenoprotein N, 1##NM_020451|SEPN1|57190|selenoprotein N, 1##NM_206926|SEPN1|57190|selenoprotein N, 1##NM_001099625|FAM54B|56181|family with sequence similarity 54, member B##NM_001099627|FAM54B|56181|family with sequence similarity 54, member B##BX647921|FAM54B|56181|family with sequence similarity 54, member B##AB075880|FAM54B|56181|family with sequence similarity 54, member B##AK314297|FAM54B|56181|family with sequence similarity 54, member B##AK299221|FAM54B|56181|family with sequence similarity 54, member B##AF173891|FAM54B|56181|family with sequence similarity 54, member B	0.908243	CTCF.p2:1:0.908
chr4	25843915	25844060	reg1023096.p1	5.854	+	NM_001177999 AK314514	-185897	+	NM_001177998 NM_006424 AK292675 AF111856 AK075046 TSC_hg19_v1_chr4_+_25657473 AF146796 BC142704 BC146666	-186527	+	TSC_hg19_v1_chr4_+_25378893 AK292336 AF191338	-465025	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	20567	-	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	71877	+	L07875 BC020780 NM_005349 NM_203283	477332	+	NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_001177998|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_006424|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK292675|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF111856|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK075046|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF146796|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC142704|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC146666|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK292336|ANAPC4|29945|anaphase promoting complex subunit 4##AF191338|ANAPC4|29945|anaphase promoting complex subunit 4##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.038373	
chr6_mcf_hap5	2894268	2894403	reg1024592.p1	5.854	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.013387	
chr12	44170460	44170557	reg1023876.p1	5.853	+	TSC_hg19_v1_chr12_+_44152777 BC013316 AY340962 AY340963 AY340964 AY340965 AY340966 AY340967 AF155118 AK000528	-17729	+	AK304583 NM_001114182 NM_001145256 NM_001145257 NM_001145258 NM_016123 AK299944 AK314288 TSC_hg19_v1_chr12_+_44152757	-17757	+	AL136759 TSC_hg19_v1_chr12_-_44152566 BX647494 NM_001098615 AK097331 AK225903 NM_001098614 BC020781 CR627435 BC068502 AK092030 AX747323 NM_031292	-17933	-	AK127868 BT019691 CR541736 CR541761 AB209302 AB384914 TSC_hg19_v1_chr12_-_44200120 AK291223 BC022491 BC022344 U02680 BC068548 EU832120 EU832214 AK297206 BC043148 NM_001242397 NM_002822	29604	-	TSC_hg19_v1_chr12_+_44229883 BC042192 BC060798 AK057287 BC030284 AL136855 NM_032256	59398	+	D89629 AK315960 AK299277 NM_001145109	1098883	-	BC013316|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340962|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340963|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340964|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340965|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340966|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340967|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AF155118|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK000528|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK304583|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001114182|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145256|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145257|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145258|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_016123|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK299944|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK314288|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AL136759|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BX647494|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098615|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK097331|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK225903|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098614|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC020781|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##CR627435|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC068502|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK092030|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_031292|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK127868|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BT019691|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541736|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541761|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AB209302|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK291223|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022491|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022344|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##U02680|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC068548|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832120|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832214|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK297206|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC043148|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_001242397|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_002822|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC042192|TMEM117|84216|transmembrane protein 117##BC060798|TMEM117|84216|transmembrane protein 117##AK057287|TMEM117|84216|transmembrane protein 117##BC030284|TMEM117|84216|transmembrane protein 117##AL136855|TMEM117|84216|transmembrane protein 117##NM_032256|TMEM117|84216|transmembrane protein 117##D89629|NELL2|4753|NEL-like 2 (chicken)##AK315960|NELL2|4753|NEL-like 2 (chicken)##AK299277|NELL2|4753|NEL-like 2 (chicken)##NM_001145109|NELL2|4753|NEL-like 2 (chicken)	0.963109	CTCF.p2:-6:0.963
chr14	74724286	74724373	reg1024160.p1	5.853	+	AY336059 NM_182894 BC128153	-18133	+	NM_001024674 AK307062 TSC_hg19_v1_chr14_+_74551662 AK055422 AK023979 BC009539	-172661	+	TSC_hg19_v1_chr14_-_74551167 BC032371 NM_005589	-173140	-	BT007412 CR457104 DQ892847 DQ896094 BC012815 TSC_hg19_v1_chr14_-_74769638 AK291332 AK308382 AF009746 AK297934 BX247984 BX248053 NM_005050	45361	-	NM_018228 TSC_hg19_v1_chr14_+_74815173	90840	+	BC053325 AK023213 TSC_hg19_v1_chr14_+_74815209 AK001673	90873	+	AY336059|VSX2|338917|visual system homeobox 2##NM_182894|VSX2|338917|visual system homeobox 2##BC128153|VSX2|338917|visual system homeobox 2##NM_001024674|LIN52|91750|lin-52 homolog (C. elegans)##AK307062|LIN52|91750|lin-52 homolog (C. elegans)##AK055422|LIN52|91750|lin-52 homolog (C. elegans)##AK023979|LIN52|91750|lin-52 homolog (C. elegans)##BC009539|LIN52|91750|lin-52 homolog (C. elegans)##BC032371|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##NM_005589|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##BT007412|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##CR457104|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ892847|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ896094|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BC012815|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK291332|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK308382|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AF009746|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK297934|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX247984|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX248053|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_005050|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_018228|VRTN|55237|vertebrae development homolog (pig)##BC053325|VRTN|55237|vertebrae development homolog (pig)##AK023213|VRTN|55237|vertebrae development homolog (pig)##AK001673|VRTN|55237|vertebrae development homolog (pig)	0.144146	
chr19	18783671	18783786	reg1024637.p2	5.853	+	TSC_hg19_v1_chr19_+_18747837 AK001940 AK222656 AK294074 NM_018316 BC026319	-35894	+	TSC_hg19_v1_chr19_+_18723679 NM_012109 AK309384 AF186264 BC010446 EU831798 EU831875	-60012	+	TSC_hg19_v1_chr19_-_18717634 AF073515 NM_004750	-66082	-	TSC_hg19_v1_chr19_+_18794453 AK024089 AY040323 NM_001098482 NM_015321	10696	+	AY360171 TSC_hg19_v1_chr19_+_18794489 BC028050 AB527764 CU688378 DQ893310 DQ894228 AB014516	10795	+	U75488 TSC_hg19_v1_chr19_-_18888853	105062	-	AK001940|KLHL26|55295|kelch-like 26 (Drosophila)##AK222656|KLHL26|55295|kelch-like 26 (Drosophila)##AK294074|KLHL26|55295|kelch-like 26 (Drosophila)##NM_018316|KLHL26|55295|kelch-like 26 (Drosophila)##BC026319|KLHL26|55295|kelch-like 26 (Drosophila)##NM_012109|TMEM59L|25789|transmembrane protein 59-like##AK309384|TMEM59L|25789|transmembrane protein 59-like##AF186264|TMEM59L|25789|transmembrane protein 59-like##BC010446|TMEM59L|25789|transmembrane protein 59-like##EU831798|TMEM59L|25789|transmembrane protein 59-like##EU831875|TMEM59L|25789|transmembrane protein 59-like##AF073515|CRLF1|9244|cytokine receptor-like factor 1##NM_004750|CRLF1|9244|cytokine receptor-like factor 1##AK024089|CRTC1|23373|CREB regulated transcription coactivator 1##AY040323|CRTC1|23373|CREB regulated transcription coactivator 1##NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1##NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1##AY360171|CRTC1|23373|CREB regulated transcription coactivator 1##BC028050|CRTC1|23373|CREB regulated transcription coactivator 1##DQ893310|CRTC1|23373|CREB regulated transcription coactivator 1##DQ894228|CRTC1|23373|CREB regulated transcription coactivator 1##AB014516|CRTC1|23373|CREB regulated transcription coactivator 1	0.983134	CTCF.p2:0:0.983
chr2	172015875	172016030	reg1023064.p1	5.853	+	AK301857 NM_001136555	-92470	-	TSC_hg19_v1_chr2_+_171785781 AK298020 BC007770 BC001408 AK296698 AK027349 AB528359 DQ892715 DQ895965 CU675801	-230138	+	TSC_hg19_v1_chr2_+_171785776 AK315508 AK023201 AK225810 AK293640 AK023082	-230251	+	TSC_hg19_v1_chr2_-_172017240 DQ890904 DQ894057 BC032657 D50927 AK292508 AF162666 AB004885	1144	-	TSC_hg19_v1_chr2_-_172017431 AK091975 NM_012290	1547	-	AK090779 NM_001136554	71871	-	AK301857|TLK1|9874|tousled-like kinase 1##NM_001136555|TLK1|9874|tousled-like kinase 1##AK298020|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC007770|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC001408|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK296698|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK027349|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ892715|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ895965|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK315508|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023201|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK225810|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK293640|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023082|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ890904|TLK1|9874|tousled-like kinase 1##DQ894057|TLK1|9874|tousled-like kinase 1##BC032657|TLK1|9874|tousled-like kinase 1##D50927|TLK1|9874|tousled-like kinase 1##AK292508|TLK1|9874|tousled-like kinase 1##AF162666|TLK1|9874|tousled-like kinase 1##AB004885|TLK1|9874|tousled-like kinase 1##AK091975|TLK1|9874|tousled-like kinase 1##NM_012290|TLK1|9874|tousled-like kinase 1##AK090779|TLK1|9874|tousled-like kinase 1##NM_001136554|TLK1|9874|tousled-like kinase 1	0.519763	CTCF.p2:6:0.520
chr2	80758597	80758691	reg1022812.p1	5.853	+	TSC_hg19_v1_chr2_-_80531838 AK225779	-226801	-	TSC_hg19_v1_chr2_-_80531719 AK290512	-226919	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	-227119	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	3927726	-	AK296741 TSC_hg19_v1_chr2_-_84686396	3927751	-	NM_003849	3927941	-	AK225779|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit	0.0	
chr6	80423556	80423649	reg1022351.p1	5.853	+	TSC_hg19_v1_chr6_+_80341019 AF340151 NM_031469 BC109043 BC109044 AK311757 BC040489 AK074506 BC052987 BC060799 BC070059 AJ297972	-82528	+	TSC_hg19_v1_chr6_-_80247114 AK299314 BX648161 BC050327 NM_001122769 NM_181714	-176473	-	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	-479177	-	NM_001243308	156534	-	TSC_hg19_v1_chr6_-_80656870 CU691582 DQ891229 AF277094 BC038506 AY037298 AK310625 AK312511 AK055277 DQ426871 NM_022726	233490	-	NM_001166691 NM_003318 TSC_hg19_v1_chr6_+_80714370 AX775733 BC032858 BC000633 AK292460	290750	+	AF340151|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_031469|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109043|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109044|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK311757|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC040489|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK074506|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC052987|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC060799|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC070059|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AJ297972|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK299314|LCA5|167691|Leber congenital amaurosis 5##BX648161|LCA5|167691|Leber congenital amaurosis 5##BC050327|LCA5|167691|Leber congenital amaurosis 5##NM_001122769|LCA5|167691|Leber congenital amaurosis 5##NM_181714|LCA5|167691|Leber congenital amaurosis 5##AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7##DQ891229|ELOVL4|6785|ELOVL fatty acid elongase 4##AF277094|ELOVL4|6785|ELOVL fatty acid elongase 4##BC038506|ELOVL4|6785|ELOVL fatty acid elongase 4##AY037298|ELOVL4|6785|ELOVL fatty acid elongase 4##AK310625|ELOVL4|6785|ELOVL fatty acid elongase 4##AK312511|ELOVL4|6785|ELOVL fatty acid elongase 4##AK055277|ELOVL4|6785|ELOVL fatty acid elongase 4##DQ426871|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_022726|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_001166691|TTK|7272|TTK protein kinase##NM_003318|TTK|7272|TTK protein kinase##AX775733|TTK|7272|TTK protein kinase##BC032858|TTK|7272|TTK protein kinase##BC000633|TTK|7272|TTK protein kinase##AK292460|TTK|7272|TTK protein kinase	0.780163	CTCF.p2:-2:0.780
chr6_qbl_hap6	2660917	2661046	reg1025564.p1	5.853	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr8	23239195	23239351	reg1025125.p1	5.853	+	AK098436 TSC_hg19_v1_chr8_-_23177535	-61765	-	TSC_hg19_v1_chr8_+_23145630 AL050297 BC032421	-93595	+	TSC_hg19_v1_chr8_+_23145620 NM_001136108 AK293465	-93676	+	BC000594 TSC_hg19_v1_chr8_-_23261609	22328	-	TSC_hg19_v1_chr8_-_23261631 U89942	22355	-	AK222477 AK312266 TSC_hg19_v1_chr8_-_23261634 BC020481 AK293292	22376	-	AK098436|LOXL2|4017|lysyl oxidase-like 2##AL050297|R3HCC1|203069|R3H domain and coiled-coil containing 1##BC032421|R3HCC1|203069|R3H domain and coiled-coil containing 1##NM_001136108|R3HCC1|203069|R3H domain and coiled-coil containing 1##AK293465|R3HCC1|203069|R3H domain and coiled-coil containing 1##BC000594|LOXL2|4017|lysyl oxidase-like 2##U89942|LOXL2|4017|lysyl oxidase-like 2##AK222477|LOXL2|4017|lysyl oxidase-like 2##AK312266|LOXL2|4017|lysyl oxidase-like 2##BC020481|LOXL2|4017|lysyl oxidase-like 2##AK293292|LOXL2|4017|lysyl oxidase-like 2	0.843918	CTCF.p2:5:0.844
chr9	34869521	34869610	reg1022029.p1	5.853	+	AK301951 AK302320 NM_001141917	-140067	-	AF001979 CR450326 AB463486 DQ892048 DQ895242 AY358887 U88320 BC027918 AB002409 AK311901 TSC_hg19_v1_chr9_-_34710134 NM_002989	-159461	-	CR456868 U77180 AB590424 DQ895236 EU176240 U88321 BC027968 AK311945 AX772806 AB000887 NM_006274	-178361	-	TSC_hg19_v1_chr9_+_34958175 BC041169 NM_015297	88616	+	AB028968 TSC_hg19_v1_chr9_+_34958324	88758	+	NM_001135004 NM_012266 TSC_hg19_v1_chr9_+_34989739 AK023253 BC012115 AK314671 AF087870	120152	+	AK302320|FAM205A|259308|family with sequence similarity 205, member A##NM_001141917|FAM205A|259308|family with sequence similarity 205, member A##AF001979|CCL21|6366|chemokine (C-C motif) ligand 21##CR450326|CCL21|6366|chemokine (C-C motif) ligand 21##DQ892048|CCL21|6366|chemokine (C-C motif) ligand 21##DQ895242|CCL21|6366|chemokine (C-C motif) ligand 21##AY358887|CCL21|6366|chemokine (C-C motif) ligand 21##U88320|CCL21|6366|chemokine (C-C motif) ligand 21##BC027918|CCL21|6366|chemokine (C-C motif) ligand 21##AB002409|CCL21|6366|chemokine (C-C motif) ligand 21##AK311901|CCL21|6366|chemokine (C-C motif) ligand 21##NM_002989|CCL21|6366|chemokine (C-C motif) ligand 21##CR456868|CCL19|6363|chemokine (C-C motif) ligand 19##U77180|CCL19|6363|chemokine (C-C motif) ligand 19##DQ895236|CCL19|6363|chemokine (C-C motif) ligand 19##EU176240|CCL19|6363|chemokine (C-C motif) ligand 19##U88321|CCL19|6363|chemokine (C-C motif) ligand 19##BC027968|CCL19|6363|chemokine (C-C motif) ligand 19##AK311945|CCL19|6363|chemokine (C-C motif) ligand 19##AX772806|CCL19|6363|chemokine (C-C motif) ligand 19##AB000887|CCL19|6363|chemokine (C-C motif) ligand 19##NM_006274|CCL19|6363|chemokine (C-C motif) ligand 19##BC041169|KIAA1045|23349|KIAA1045##NM_015297|KIAA1045|23349|KIAA1045##AB028968|KIAA1045|23349|KIAA1045##NM_001135004|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##NM_012266|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK023253|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK314671|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AF087870|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5	0.0	
chr11	16635313	16635409	reg1021033.p1	5.852	+	AF309034 NM_033326	-137436	-	BC037866 NM_001145811	-204934	-	AL136780 AK310506 BC047064 NM_001145819 NM_017508	-210960	-	NM_014267 TSC_hg19_v1_chr11_+_16760165	124799	+	TSC_hg19_v1_chr11_+_16760204 BC103747 AK315382 BC007103 BC016352 BC020937 U51678 CR456882 CU675547 AK124165	124923	+	TSC_hg19_v1_chr11_-_16996590 D28414	361215	-	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##NM_014267|C11orf58|10944|chromosome 11 open reading frame 58##BC103747|C11orf58|10944|chromosome 11 open reading frame 58##AK315382|C11orf58|10944|chromosome 11 open reading frame 58##BC007103|C11orf58|10944|chromosome 11 open reading frame 58##BC016352|C11orf58|10944|chromosome 11 open reading frame 58##BC020937|C11orf58|10944|chromosome 11 open reading frame 58##U51678|C11orf58|10944|chromosome 11 open reading frame 58##CR456882|C11orf58|10944|chromosome 11 open reading frame 58##D28414|RPL36A|6173|ribosomal protein L36a	0.486699	CTCF.p2:13:0.487
chr11	43152345	43152493	reg1025776.p2	5.852	+	AB046800 NM_020929	-2836756	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-2837825	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-6532617	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	181099	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	181145	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	181221	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.0	
chr21	43394076	43394163	reg1021638.p1	5.852	+	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	-20036	-	BC062323 AL833323 NM_199050	-47330	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	-94621	-	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	36352	-	AB051810 AB051811 NM_001199527 NM_001199528	88948	+	AB096965 AY771619 AY771620 NM_001004416 NM_173568	97306	+	AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1	0.891139	CTCF.p2:-24:0.891
chr4	6333900	6334021	reg1025869.p1	5.852	+	TSC_hg19_v1_chr4_+_6271608 AK295986 BC030130 AK312897	-62334	+	Y18064 TSC_hg19_v1_chr4_+_6271588	-62366	+	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	-62392	+	AB590545 AK093115 AX747932 NM_181876	49624	-	BC032954 NM_001206996	88884	-	AF086924 TSC_hg19_v1_chr4_-_6474082	140085	-	AK295986|WFS1|7466|Wolfram syndrome 1 (wolframin)##BC030130|WFS1|7466|Wolfram syndrome 1 (wolframin)##AK312897|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##AK093115|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##NM_181876|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##BC032954|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##NM_001206996|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##AF086924|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma	0.979794	CTCF.p2:0:0.980
chr12	118295593	118295722	reg1021897.p1	5.851	+	AK294435 AF446135 EU753241 U17327 AK307481 NM_000620 NM_001204218	-496149	-	AF446136 TSC_hg19_v1_chr12_-_117799037	-496636	-	NM_001204214	-548443	-	NM_173598	110370	-	NM_001130112 NM_001206801 NM_007370 NM_181578 TSC_hg19_v1_chr12_+_118454507 AK291107 AK094575 AK290685 BC001866 BC013961 AB208992 BC020440 L07540 AB464140 CU674898 CR407651	158911	+	AK310892 TSC_hg19_v1_chr12_-_118498977 BC015887 AK298513 AF229181 NM_018639	203278	-	AK294435|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446135|NOS1|4842|nitric oxide synthase 1 (neuronal)##EU753241|NOS1|4842|nitric oxide synthase 1 (neuronal)##U17327|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK307481|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_000620|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204218|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446136|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_173598|KSR2|283455|kinase suppressor of ras 2##NM_001130112|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_001206801|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_007370|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_181578|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK291107|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK094575|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK290685|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC001866|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC013961|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AB208992|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC020440|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##L07540|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##CR407651|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK310892|WSB2|55884|WD repeat and SOCS box containing 2##BC015887|WSB2|55884|WD repeat and SOCS box containing 2##AK298513|WSB2|55884|WD repeat and SOCS box containing 2##AF229181|WSB2|55884|WD repeat and SOCS box containing 2##NM_018639|WSB2|55884|WD repeat and SOCS box containing 2	0.043498	
chr2	49844095	49844202	reg1022949.p1	5.851	+	AY429104 BC096831 X68044 JN003607 BC118548 BC125270 M65085 S59900 M95489 AK292562 AK310367 NM_000145 NM_181446	-462538	-	S57793 M63108 M73746 AK123498 NM_000233	-861304	-	AK302220 NM_001193487 NM_006872 BC025991 AK223350 AF106857 CU693090 DQ891566 DQ894756 BC064585	-999173	+	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	730774	-	TSC_hg19_v1_chr2_-_51259258 BC046631	1415110	-	EF539882 AK124726 NM_001135659 NM_004801	1415456	-	AY429104|FSHR|2492|follicle stimulating hormone receptor##BC096831|FSHR|2492|follicle stimulating hormone receptor##X68044|FSHR|2492|follicle stimulating hormone receptor##JN003607|FSHR|2492|follicle stimulating hormone receptor##BC118548|FSHR|2492|follicle stimulating hormone receptor##BC125270|FSHR|2492|follicle stimulating hormone receptor##M65085|FSHR|2492|follicle stimulating hormone receptor##S59900|FSHR|2492|follicle stimulating hormone receptor##M95489|FSHR|2492|follicle stimulating hormone receptor##AK292562|FSHR|2492|follicle stimulating hormone receptor##AK310367|FSHR|2492|follicle stimulating hormone receptor##NM_000145|FSHR|2492|follicle stimulating hormone receptor##NM_181446|FSHR|2492|follicle stimulating hormone receptor##S57793|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M63108|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##M73746|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK123498|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##NM_000233|LHCGR|3973|luteinizing hormone/choriogonadotropin receptor##AK302220|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_001193487|GTF2A1L|11036|general transcription factor IIA, 1-like##NM_006872|GTF2A1L|11036|general transcription factor IIA, 1-like##BC025991|GTF2A1L|11036|general transcription factor IIA, 1-like##AK223350|GTF2A1L|11036|general transcription factor IIA, 1-like##AF106857|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ891566|GTF2A1L|11036|general transcription factor IIA, 1-like##DQ894756|GTF2A1L|11036|general transcription factor IIA, 1-like##BC064585|GTF2A1L|11036|general transcription factor IIA, 1-like##AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##BC046631|NRXN1|9378|neurexin 1##EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1	0.98261	CTCF.p2:-13:0.983
chr6	7086775	7086941	reg1023982.p1	5.851	+	BC039678 TSC_hg19_v1_chr6_+_6725205	-361697	+	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	-497908	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-765948	-	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	20968	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	21177	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	21365	+	NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1	0.0	
chr6	88889635	88889776	reg1022721.p2	5.851	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-13939	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-34669	-	BC029488 NM_030960 AF203447	-132175	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	783486	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	783603	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	783642	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.0	
chr8	102217227	102217407	reg1025846.p2	5.851	+	TSC_hg19_v1_chr8_-_101965608 NM_003406	-251694	-	TSC_hg19_v1_chr8_-_101965595 M86400	-251741	-	TSC_hg19_v1_chr8_-_101965198 NM_001135699	-252091	-	BC035233 TSC_hg19_v1_chr8_-_102217845 BC015925 AF125099 AF275802 AF275809 AK290477 BC068524	376	-	TSC_hg19_v1_chr8_-_102217877 NM_001042511	559	-	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	637	-	NM_003406|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##M86400|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135699|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##BC035233|ZNF706|51123|zinc finger protein 706##BC015925|ZNF706|51123|zinc finger protein 706##AF125099|ZNF706|51123|zinc finger protein 706##AF275802|ZNF706|51123|zinc finger protein 706##AF275809|ZNF706|51123|zinc finger protein 706##AK290477|ZNF706|51123|zinc finger protein 706##BC068524|ZNF706|51123|zinc finger protein 706##NM_001042511|ZNF706|51123|zinc finger protein 706##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706	0.128681	
chr9	139566141	139566312	reg1025772.p2	5.851	+	BC012377 TSC_hg19_v1_chr9_+_139560248	-5955	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	-6011	+	NM_016215 AL512735 AY358903 BC088371 AY358902	-8825	+	TSC_hg19_v1_chr9_-_139581808 DQ892146 DQ895342	15579	-	TSC_hg19_v1_chr9_-_139581856 BC004529 BC019292 U56418 BC000026	15613	-	AF011374 TSC_hg19_v1_chr9_-_139581883 AF000237	15651	-	BC012377|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##DQ892146|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##DQ895342|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##BC004529|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##BC019292|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##U56418|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##BC000026|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##AF011374|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##AF000237|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)	0.930581	CTCF.p2:15:0.931
chrX	135776911	135777055	reg1002553.p1	5.851	+	AK129909 TSC_hg19_v1_chrX_-_135749484	-27517	-	BC071754 NM_000074 AK292637 X68550 X67878 L07414 BC074950 X96710 Z15017 FN298241 CU687160 AB590912 AF529195 AY197739	-46612	+	BC000045 NM_016267 AK309912 BC003362 AF137387	-162616	+	AK294929 TSC_hg19_v1_chrX_-_135849503 AK295709 AK299861	72524	-	D25304 TSC_hg19_v1_chrX_-_135863046 AK291742	86070	-	TSC_hg19_v1_chrX_-_135863105 BX537390	86126	-	AK129909|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##BC071754|CD40LG|959|CD40 ligand##NM_000074|CD40LG|959|CD40 ligand##AK292637|CD40LG|959|CD40 ligand##X68550|CD40LG|959|CD40 ligand##X67878|CD40LG|959|CD40 ligand##L07414|CD40LG|959|CD40 ligand##BC074950|CD40LG|959|CD40 ligand##Z15017|CD40LG|959|CD40 ligand##FN298241|CD40LG|959|CD40 ligand##AF529195|CD40LG|959|CD40 ligand##AY197739|CD40LG|959|CD40 ligand##BC000045|VGLL1|51442|vestigial like 1 (Drosophila)##NM_016267|VGLL1|51442|vestigial like 1 (Drosophila)##AK309912|VGLL1|51442|vestigial like 1 (Drosophila)##BC003362|VGLL1|51442|vestigial like 1 (Drosophila)##AF137387|VGLL1|51442|vestigial like 1 (Drosophila)##AK294929|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK295709|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK299861|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##D25304|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK291742|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##BX537390|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	0.0	
chrX	151989816	151989960	reg1023620.p1	5.851	+	BC017389 BC016803 BC000340 AK292384 BC005963 NM_005362	-51672	-	AF080246 AF136715 NM_001080848 NM_001129828 NM_004909 BC119735 BC119734 NM_001129826	-62117	+	BC109188 NM_005361 NM_175742 NM_175743 BC108720 AK290443	-67520	-	TSC_hg19_v1_chrX_-_151999272 AK311940 BC013873 BC005334 NM_004344 X72964	9393	-	NM_001129765 NM_015922 U47105 BC007816 TSC_hg19_v1_chrX_+_151999551	9646	+	TSC_hg19_v1_chrX_+_151999576 BC000245	9689	+	BC017389|MAGEA3|4102|melanoma antigen family A, 3##BC016803|MAGEA3|4102|melanoma antigen family A, 3##BC000340|MAGEA3|4102|melanoma antigen family A, 3##AK292384|MAGEA3|4102|melanoma antigen family A, 3##BC005963|MAGEA3|4102|melanoma antigen family A, 3##NM_005362|MAGEA3|4102|melanoma antigen family A, 3##AF080246|CSAG3|389903|CSAG family, member 3##AF136715|CSAG3|389903|CSAG family, member 3##NM_001080848|CSAG2|728461|CSAG family, member 2##NM_001129828|CSAG3|389903|CSAG family, member 3##NM_004909|CSAG2|728461|CSAG family, member 2##BC119735|CSAG3|389903|CSAG family, member 3##BC119734|CSAG3|389903|CSAG family, member 3##NM_001129826|CSAG3|389903|CSAG family, member 3##BC109188|MAGEA2|4101|melanoma antigen family A, 2##NM_005361|MAGEA2|4101|melanoma antigen family A, 2##NM_175742|MAGEA2|4101|melanoma antigen family A, 2##NM_175743|MAGEA2|4101|melanoma antigen family A, 2##BC108720|MAGEA2|4101|melanoma antigen family A, 2##AK290443|MAGEA2|4101|melanoma antigen family A, 2##AK311940|CETN2|1069|centrin, EF-hand protein, 2##BC013873|CETN2|1069|centrin, EF-hand protein, 2##BC005334|CETN2|1069|centrin, EF-hand protein, 2##NM_004344|CETN2|1069|centrin, EF-hand protein, 2##X72964|CETN2|1069|centrin, EF-hand protein, 2##NM_001129765|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##NM_015922|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##U47105|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##BC007816|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##BC000245|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like	0.116322	
chr16	67875770	67875938	reg1025651.p1	5.850	+	TSC_hg19_v1_chr16_-_67867810 BC042204 BX648617 AK055237 AK291527	-8025	-	AK023173 AK300887 TSC_hg19_v1_chr16_-_67867801	-8051	-	AK225399 TSC_hg19_v1_chr16_-_67867798	-8056	-	TSC_hg19_v1_chr16_+_67876211 NM_020457	361	+	TSC_hg19_v1_chr16_+_67876222 AK289367 BC012182	406	+	L10378 L10379 TSC_hg19_v1_chr16_+_67876463 DQ892600 DQ895831 CU680258 EF036502	628	+	BC042204|CENPT|80152|centromere protein T##BX648617|CENPT|80152|centromere protein T##AK055237|CENPT|80152|centromere protein T##AK291527|CENPT|80152|centromere protein T##AK023173|CENPT|80152|centromere protein T##AK300887|CENPT|80152|centromere protein T##AK225399|CENPT|80152|centromere protein T##NM_020457|THAP11|57215|THAP domain containing 11##AK289367|THAP11|57215|THAP domain containing 11##BC012182|THAP11|57215|THAP domain containing 11##L10378|THAP11|57215|THAP domain containing 11##L10379|THAP11|57215|THAP domain containing 11##DQ892600|THAP11|57215|THAP domain containing 11##DQ895831|THAP11|57215|THAP domain containing 11##EF036502|THAP11|57215|THAP domain containing 11	0.0	
chr6_mann_hap4	2857414	2857555	reg1024690.p1	5.850	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.013387	
chr15	67793690	67793800	reg1020145.p1	5.849	+	TSC_hg19_v1_chr15_+_67547171 BC039463 NM_001031715 NM_022784 AY014282 AK292478 AK304303 BC031041 BC048964 BC039292 AK022538 CU690588	-246571	+	AB528136 AM393020 AM393411 CR533540 CU691322 TSC_hg19_v1_chr15_-_67547000 AK021568 AL136715 BC058886 BC047026 BC035852 NM_024666	-246725	-	NM_001145104 AK300614 AK301348	-335249	+	TSC_hg19_v1_chr15_+_67813533 NM_001143936 AK294012 AY726587	19802	+	TSC_hg19_v1_chr15_-_67814131 BC047537	20411	-	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	41277	+	BC039463|IQCH|64799|IQ motif containing H##NM_001031715|IQCH|64799|IQ motif containing H##NM_022784|IQCH|64799|IQ motif containing H##AY014282|IQCH|64799|IQ motif containing H##AK292478|IQCH|64799|IQ motif containing H##AK304303|IQCH|64799|IQ motif containing H##BC031041|IQCH|64799|IQ motif containing H##BC048964|IQCH|64799|IQ motif containing H##BC039292|IQCH|64799|IQ motif containing H##AK022538|IQCH|64799|IQ motif containing H##AM393020|AAGAB|79719|alpha- and gamma-adaptin binding protein##AM393411|AAGAB|79719|alpha- and gamma-adaptin binding protein##CR533540|AAGAB|79719|alpha- and gamma-adaptin binding protein##AK021568|AAGAB|79719|alpha- and gamma-adaptin binding protein##AL136715|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC058886|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC047026|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC035852|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_024666|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3##NM_001143936|C15orf61|145853|chromosome 15 open reading frame 61##AK294012|C15orf61|145853|chromosome 15 open reading frame 61##AY726587|C15orf61|145853|chromosome 15 open reading frame 61##BC047537|LOC100506686|100506686|uncharacterized LOC100506686##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5	0.0	
chr21	37908197	37908377	reg1019264.p2	5.849	+	AF314090 AY355348 NM_001146079 NM_144492	-55900	-	BC012126 NM_012130 AY355349	-69556	-	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	-150597	+	AJ566765 NM_001146078	6610	-	AJ566766 NM_001146077	40579	-	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	163153	+	AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AJ566765|CLDN14|23562|claudin 14##NM_001146078|CLDN14|23562|claudin 14##AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14	0.0	
chr2	169204720	169204841	reg1023494.p1	5.849	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	-100707	-	NM_020981	-529599	+	EF119711 EF119717 NM_001199144 NM_001199145	-1160988	+	TSC_hg19_v1_chr2_+_169312764 AK172775	107979	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	108095	+	AK093444 AX748130 NM_001171631	438268	+	BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##AK172775|CERS6|253782|ceramide synthase 6##NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6##AK093444|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171631|NOSTRIN|115677|nitric oxide synthase trafficker	0.0	
chr3	193855188	193855368	reg1014274.p1	5.849	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	-1323	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	-1345	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-544113	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	216796	-	BC101064 BC101065 TSC_hg19_v1_chr3_-_194090471 AK125112 NM_001135057 NM_130830	235189	-	NM_004488	264716	-	AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2##BC101064|LRRC15|131578|leucine rich repeat containing 15##BC101065|LRRC15|131578|leucine rich repeat containing 15##AK125112|LRRC15|131578|leucine rich repeat containing 15##NM_001135057|LRRC15|131578|leucine rich repeat containing 15##NM_130830|LRRC15|131578|leucine rich repeat containing 15##NM_004488|GP5|2814|glycoprotein V (platelet)	0.0	
chr7	27814474	27814591	reg1025393.p1	5.849	+	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-34713	+	BC001764 TSC_hg19_v1_chr7_+_27779809	-34723	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	-34757	+	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	405669	-	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	405874	-	L05913 NM_182899	524407	+	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5	0.128743	
chr9	132373422	132373574	reg1002968.p4	5.849	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	-122057	+	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	-122144	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-290203	+	BC112353 AK093122 AX747938 NM_199350	9539	-	TSC_hg19_v1_chr9_+_132388441 NM_014064 AK290957 AK292332 AK298840 AK307056 AK313829	14927	+	TSC_hg19_v1_chr9_+_132388461 BC001396 BC033234 AF110776	14972	+	BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50##NM_014064|METTL11A|28989|methyltransferase like 11A##AK290957|METTL11A|28989|methyltransferase like 11A##AK292332|METTL11A|28989|methyltransferase like 11A##AK298840|METTL11A|28989|methyltransferase like 11A##AK307056|METTL11A|28989|methyltransferase like 11A##AK313829|METTL11A|28989|methyltransferase like 11A##BC001396|METTL11A|28989|methyltransferase like 11A##BC033234|METTL11A|28989|methyltransferase like 11A##AF110776|METTL11A|28989|methyltransferase like 11A	0.87743	CTCF.p2:24:0.877
chr9	19471936	19472069	reg1024489.p1	5.849	+	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-62999	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-91775	-	TSC_hg19_v1_chr9_-_19378815 BC035447	-93136	-	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	314949	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	1150446	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	1150494	-	AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##BC035447|RPS6|6194|ribosomal protein S6##BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	0.914544	CTCF.p2:-12:0.915
chrX	109154395	109154480	reg1021796.p1	5.849	+	TSC_hg19_v1_chrX_-_108976528 AB061713 AK292070 AF030555 NM_004458 NM_022977	-177873	-	TSC_hg19_v1_chrX_-_108976464 Y12777 Y13058 AB061714 BC034959 AK307566 AK294915	-177958	-	DQ891287 DQ894471 DQ896649 DQ896656 DQ896659 DQ896664 EF535525 BC035330 AJ012743 NM_012282 AK223306 AK314923 DQ192294 TSC_hg19_v1_chrX_-_108868398	-286113	-	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	91433	+	TSC_hg19_v1_chrX_+_109246341 NM_032227 AK026332	91903	+	TSC_hg19_v1_chrX_+_109246360 BC085605	91918	+	AB061713|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK292070|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AF030555|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_004458|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_022977|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y12777|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y13058|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061714|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##BC034959|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK307566|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK294915|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##DQ891287|KCNE1L|23630|KCNE1-like##DQ894471|KCNE1L|23630|KCNE1-like##DQ896649|KCNE1L|23630|KCNE1-like##DQ896656|KCNE1L|23630|KCNE1-like##DQ896659|KCNE1L|23630|KCNE1-like##DQ896664|KCNE1L|23630|KCNE1-like##EF535525|KCNE1L|23630|KCNE1-like##BC035330|KCNE1L|23630|KCNE1-like##AJ012743|KCNE1L|23630|KCNE1-like##NM_012282|KCNE1L|23630|KCNE1-like##AK223306|KCNE1L|23630|KCNE1-like##AK314923|KCNE1L|23630|KCNE1-like##DQ192294|KCNE1L|23630|KCNE1-like##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164##NM_032227|TMEM164|84187|transmembrane protein 164##AK026332|TMEM164|84187|transmembrane protein 164##BC085605|TMEM164|84187|transmembrane protein 164	0.237698	CTCF.p2:14:0.238
chr1	160749923	160750096	reg1022794.p1	5.848	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-40945	+	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	-68423	-	AK314244 NM_003037 BC012602	-132946	-	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	15989	+	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	82569	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	104949	-	AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)	1.126286	CTCF.p2:-36:0.563	CTCF.p2:-73:0.563
chr10	52382569	52382748	reg1023355.p3	5.847	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-374318	-	NM_018232	-544773	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-554936	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	1045	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	117052	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	262735	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.0	
chr13	114112708	114112839	reg1027001.p1	5.847	+	AJ313429 NM_138430	-4935	-	TSC_hg19_v1_chr13_-_114103452 BC009755 NM_199162	-9319	-	AB449887 TSC_hg19_v1_chr13_-_114018427 AK300897 BC080640 AK309959 NM_024719	-94353	-	TSC_hg19_v1_chr13_-_114145027 AK000099 AK001566 BC056669 NM_001014283	32247	-	NM_017905 BC068515 TSC_hg19_v1_chr13_+_114145348 BC012564	32570	+	TSC_hg19_v1_chr13_+_114145422 AK000630 AY358768	32641	+	AJ313429|ADPRHL1|113622|ADP-ribosylhydrolase like 1##NM_138430|ADPRHL1|113622|ADP-ribosylhydrolase like 1##BC009755|ADPRHL1|113622|ADP-ribosylhydrolase like 1##NM_199162|ADPRHL1|113622|ADP-ribosylhydrolase like 1##AB449887|GRTP1|79774|growth hormone regulated TBC protein 1##AK300897|GRTP1|79774|growth hormone regulated TBC protein 1##BC080640|GRTP1|79774|growth hormone regulated TBC protein 1##AK309959|GRTP1|79774|growth hormone regulated TBC protein 1##NM_024719|GRTP1|79774|growth hormone regulated TBC protein 1##AK000099|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##AK001566|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##BC056669|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##NM_001014283|DCUN1D2|55208|DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)##NM_017905|TMCO3|55002|transmembrane and coiled-coil domains 3##BC068515|TMCO3|55002|transmembrane and coiled-coil domains 3##BC012564|TMCO3|55002|transmembrane and coiled-coil domains 3##AK000630|TMCO3|55002|transmembrane and coiled-coil domains 3##AY358768|TMCO3|55002|transmembrane and coiled-coil domains 3	0.996635	CTCF.p2:6:0.997
chr1	87431067	87431191	reg1023023.p2	5.847	+	AB007917 TSC_hg19_v1_chr1_+_87380462	-50672	+	TSC_hg19_v1_chr1_+_87380374 BC025384 BC025990 NM_001134492 NM_012262 AK023260 AB024568 BC108735	-50776	+	TSC_hg19_v1_chr1_-_87380011 NM_004261 NM_203341	-51072	-	TSC_hg19_v1_chr1_+_87595568 BC030523	164420	+	NM_006769 U24576 TSC_hg19_v1_chr1_+_87794164	363028	+	AK292578 TSC_hg19_v1_chr1_+_87794564	363430	+	AB007917|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025384|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025990|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_001134492|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_012262|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AK023260|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AB024568|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC108735|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_004261|SEP15|9403|15 kDa selenoprotein##NM_203341|SEP15|9403|15 kDa selenoprotein##BC030523|LOC339524|339524|uncharacterized LOC339524##NM_006769|LMO4|8543|LIM domain only 4##U24576|LMO4|8543|LIM domain only 4##AK292578|LMO4|8543|LIM domain only 4	0.998965	CTCF.p2:-1:0.999
chr22	25164913	25165046	reg1022426.p2	5.847	+	TSC_hg19_v1_chr22_+_25003637 NM_001032365	-161356	+	AL832738 TSC_hg19_v1_chr22_+_24999158 NM_001032364 BC035341 NM_005265 L20494 J04131	-165786	+	TSC_hg19_v1_chr22_-_24989036 BC032388 BC108684 NM_207644 AK097054	-175967	-	AB079368 NM_001008496 AK302409 AK315806	5705	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	37231	+	BC130647 BC130649 CR456388 NM_001001663	170333	-	NM_001032365|GGT1|2678|gamma-glutamyltransferase 1##AL832738|GGT1|2678|gamma-glutamyltransferase 1##NM_001032364|GGT1|2678|gamma-glutamyltransferase 1##BC035341|GGT1|2678|gamma-glutamyltransferase 1##NM_005265|GGT1|2678|gamma-glutamyltransferase 1##L20494|GGT1|2678|gamma-glutamyltransferase 1##J04131|GGT1|2678|gamma-glutamyltransferase 1##BC032388|FAM211B|388886|family with sequence similarity 211, member B##BC108684|FAM211B|388886|family with sequence similarity 211, member B##NM_207644|FAM211B|388886|family with sequence similarity 211, member B##AK097054|FAM211B|388886|family with sequence similarity 211, member B##AB079368|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001008496|PIWIL3|440822|piwi-like 3 (Drosophila)##AK302409|PIWIL3|440822|piwi-like 3 (Drosophila)##AK315806|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211	0.681415	CTCF.p2:-17:0.681
chr4	111880597	111880697	reg1022157.p2	5.847	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-317369	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-322478	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-336372	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	1185967	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	1272437	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	1326354	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.974375	CTCF.p2:-4:0.974
chr9	72967882	72967983	reg1023082.p1	5.847	+	TSC_hg19_v1_chr9_+_72873993 AB385355 AJ310550 DQ893364 DQ896768	-93943	+	BC038225 TSC_hg19_v1_chr9_+_72873908 BC017666 AB011166 AK055825	-93994	+	TSC_hg19_v1_chr9_+_72873893 AK304133 NM_015110	-94072	+	AB451404 CU686806 AB464604 EU446889 TSC_hg19_v1_chr9_-_73028875 BC074879 BC074880 AK313631 BC069431	60743	-	D31716 S72504 NM_001206	61623	-	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	516028	-	AJ310550|SMC5|23137|structural maintenance of chromosomes 5##DQ893364|SMC5|23137|structural maintenance of chromosomes 5##DQ896768|SMC5|23137|structural maintenance of chromosomes 5##BC038225|SMC5|23137|structural maintenance of chromosomes 5##BC017666|SMC5|23137|structural maintenance of chromosomes 5##AB011166|SMC5|23137|structural maintenance of chromosomes 5##AK055825|SMC5|23137|structural maintenance of chromosomes 5##AK304133|SMC5|23137|structural maintenance of chromosomes 5##NM_015110|SMC5|23137|structural maintenance of chromosomes 5##AB451404|KLF9|687|Kruppel-like factor 9##EU446889|KLF9|687|Kruppel-like factor 9##BC074879|KLF9|687|Kruppel-like factor 9##BC074880|KLF9|687|Kruppel-like factor 9##AK313631|KLF9|687|Kruppel-like factor 9##BC069431|KLF9|687|Kruppel-like factor 9##D31716|KLF9|687|Kruppel-like factor 9##S72504|KLF9|687|Kruppel-like factor 9##NM_001206|KLF9|687|Kruppel-like factor 9##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	0.289544	CTCF.p2:-18:0.290
chr11	78297614	78297762	reg1028352.p1	5.846	+	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-11793	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-11896	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	-168812	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	854036	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	4147210	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	4313829	-	AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_080491|GAB2|9846|GRB2-associated binding protein 2##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)	0.99829	CTCF.p2:4:0.998
chr17	76778763	76778943	reg1024337.p2	5.846	+	AB590939 EU832306 EU832390 BC050452 BC038385 TSC_hg19_v1_chr17_-_76778380 AK296914 AK307917 M85169 NM_004762 NM_017456	-500	-	TSC_hg19_v1_chr17_-_76732958 AK311535	-45855	-	TSC_hg19_v1_chr17_-_76719676 AK293894	-59102	-	BC071582 TSC_hg19_v1_chr17_-_76836610	57797	-	TSC_hg19_v1_chr17_-_76836843 AK225426	57930	-	TSC_hg19_v1_chr17_-_76836895 AB040886 BC027992 AK022913 AK225155 BC016487 BC038983 NM_025090 AK001671	58067	-	EU832306|CYTH1|9267|cytohesin 1##EU832390|CYTH1|9267|cytohesin 1##BC050452|CYTH1|9267|cytohesin 1##BC038385|CYTH1|9267|cytohesin 1##AK296914|CYTH1|9267|cytohesin 1##AK307917|CYTH1|9267|cytohesin 1##M85169|CYTH1|9267|cytohesin 1##NM_004762|CYTH1|9267|cytohesin 1##NM_017456|CYTH1|9267|cytohesin 1##AK293894|CYTH1|9267|cytohesin 1##BC071582|USP36|57602|ubiquitin specific peptidase 36##AK225426|USP36|57602|ubiquitin specific peptidase 36##AB040886|USP36|57602|ubiquitin specific peptidase 36##BC027992|USP36|57602|ubiquitin specific peptidase 36##AK022913|USP36|57602|ubiquitin specific peptidase 36##AK225155|USP36|57602|ubiquitin specific peptidase 36##BC016487|USP36|57602|ubiquitin specific peptidase 36##BC038983|USP36|57602|ubiquitin specific peptidase 36##NM_025090|USP36|57602|ubiquitin specific peptidase 36##AK001671|USP36|57602|ubiquitin specific peptidase 36	0.013315	
chr9	46734394	46734527	reg1024593.p1	5.846	+	TSC_hg19_v1_chr9_+_45441926 BC006438	-1292534	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-3049617	+	NM_001145196	-3103731	-	BC040528 NM_001113541 NM_015667	18775149	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	19722841	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	19724036	-	BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.997456	CTCF.p2:-10:0.997
chr22	43391315	43391428	reg1029665.p1	5.845	+	AL136845 NM_001184971	-35485	-	BC008037 NM_007229	-48325	-	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-138016	-	TSC_hg19_v1_chr22_-_43411136 AF128536	19768	-	TSC_hg19_v1_chr22_-_43411156 NM_001184970	19806	-	TSC_hg19_v1_chr22_-_43485410 AF104927 AF173935 AK315658 BC009058 AK095996 BC014968 AL136687 NM_012263	94016	-	AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184970|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF104927|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AF173935|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK315658|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC009058|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK095996|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC014968|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AL136687|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_012263|TTLL1|25809|tubulin tyrosine ligase-like family, member 1	0.0	
chr6	2998741	2998922	reg1000336.p2	5.845	+	AK094983 NM_001195291 NM_004568	-26433	-	TSC_hg19_v1_chr6_-_2971981 AK314578	-26782	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	-27020	-	TSC_hg19_v1_chr6_+_3000111 NM_000904 AK311746 AK056981 J02888	1297	+	AK314176 TSC_hg19_v1_chr6_+_3064200 AB208926	65335	+	BC126254 BC126256 HQ258488 NM_003804 U50062 AK304701	78233	+	AK094983|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_001195291|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_004568|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314578|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_000904|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK311746|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK056981|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##J02888|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK314176|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AB208926|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	0.0	
chr11	6319207	6319324	reg1016587.p1	5.844	+	NM_176875 D13305 S70057 L07746 AK292064 AK226020 BC000740 AK314266 AB527993 AF239668 Y13464 DQ890577 DQ893737 AF441129 AY029770 AY322551 BT006789 L04473 L08112	-38235	+	NM_001037329 AK122736	-58940	+	TSC_hg19_v1_chr11_-_6255892 AK056468 NM_001098794 NM_032127	-63344	-	DQ892300 DQ895499 BC038387 TSC_hg19_v1_chr11_-_6341732 BC011585 NM_145040 AF339881	22468	-	TSC_hg19_v1_chr11_+_6411681 NM_000543 NM_001007593 AB209775 AK292388 X59960 BC041164 M59916 AY649987 HQ132745 HQ132746 HQ132747 HQ132748	92467	+	TSC_hg19_v1_chr11_-_6440299 AK293452 AF394214 L77864 NM_001164 AK293613 AK294495 AK311725	121058	-	NM_176875|CCKBR|887|cholecystokinin B receptor##D13305|CCKBR|887|cholecystokinin B receptor##S70057|CCKBR|887|cholecystokinin B receptor##L07746|CCKBR|887|cholecystokinin B receptor##AK292064|CCKBR|887|cholecystokinin B receptor##AK226020|CCKBR|887|cholecystokinin B receptor##BC000740|CCKBR|887|cholecystokinin B receptor##AK314266|CCKBR|887|cholecystokinin B receptor##AF239668|CCKBR|887|cholecystokinin B receptor##DQ890577|CCKBR|887|cholecystokinin B receptor##DQ893737|CCKBR|887|cholecystokinin B receptor##AF441129|CCKBR|887|cholecystokinin B receptor##AY029770|CCKBR|887|cholecystokinin B receptor##AY322551|CCKBR|887|cholecystokinin B receptor##BT006789|CCKBR|887|cholecystokinin B receptor##L04473|CCKBR|887|cholecystokinin B receptor##L08112|CCKBR|887|cholecystokinin B receptor##NM_001037329|CNGA4|1262|cyclic nucleotide gated channel alpha 4##AK122736|CNGA4|1262|cyclic nucleotide gated channel alpha 4##AK056468|FAM160A2|84067|family with sequence similarity 160, member A2##NM_001098794|FAM160A2|84067|family with sequence similarity 160, member A2##NM_032127|FAM160A2|84067|family with sequence similarity 160, member A2##DQ892300|PRKCDBP|112464|protein kinase C, delta binding protein##DQ895499|PRKCDBP|112464|protein kinase C, delta binding protein##BC038387|PRKCDBP|112464|protein kinase C, delta binding protein##BC011585|PRKCDBP|112464|protein kinase C, delta binding protein##NM_145040|PRKCDBP|112464|protein kinase C, delta binding protein##AF339881|PRKCDBP|112464|protein kinase C, delta binding protein##NM_000543|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##NM_001007593|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AB209775|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK292388|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##X59960|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##BC041164|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##M59916|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AY649987|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132745|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132746|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132747|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132748|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK293452|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AF394214|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##L77864|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_001164|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK293613|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK294495|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK311725|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)	0.867658	CTCF.p2:3:0.868
chr12	7795576	7795721	reg1026933.p1	5.844	+	DQ058615 TSC_hg19_v1_chr12_-_7656374 BC051281 AK226017 Z22968 Z22969 Z22970 Z22971 NM_004244 NM_203416	-139298	-	GQ397482 AY358856 AK303372 AF264014 NM_174941 BC104962 BC104964	-198911	-	NM_001080454	-338721	+	U72890 L25877 U72891 BC101405 BC101404 BC101972 BC096158 BC096159 BC096160 BC096161 BC101973 BC144708 NM_001644	22836	-	CU689052 DQ892661 DQ895901 AF110641 AF263538 NM_020634 BC030959 AY358875	52708	-	AY317075 NM_199286 BC125145	68425	+	DQ058615|CD163|9332|CD163 molecule##BC051281|CD163|9332|CD163 molecule##AK226017|CD163|9332|CD163 molecule##Z22968|CD163|9332|CD163 molecule##Z22969|CD163|9332|CD163 molecule##Z22970|CD163|9332|CD163 molecule##Z22971|CD163|9332|CD163 molecule##NM_004244|CD163|9332|CD163 molecule##NM_203416|CD163|9332|CD163 molecule##GQ397482|CD163L1|283316|CD163 molecule-like 1##AK303372|CD163L1|283316|CD163 molecule-like 1##AF264014|CD163L1|283316|CD163 molecule-like 1##NM_174941|CD163L1|283316|CD163 molecule-like 1##BC104962|CD163L1|283316|CD163 molecule-like 1##BC104964|CD163L1|283316|CD163 molecule-like 1##NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4##U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##DQ892661|GDF3|9573|growth differentiation factor 3##DQ895901|GDF3|9573|growth differentiation factor 3##AF110641|GDF3|9573|growth differentiation factor 3##AF263538|GDF3|9573|growth differentiation factor 3##NM_020634|GDF3|9573|growth differentiation factor 3##BC030959|GDF3|9573|growth differentiation factor 3##AY358875|GDF3|9573|growth differentiation factor 3##AY317075|DPPA3|359787|developmental pluripotency associated 3##NM_199286|DPPA3|359787|developmental pluripotency associated 3##BC125145|STELLAR|400206|developmental pluripotency associated 3 pseudogene	0.896818	CTCF.p2:-8:0.897
chr2	233095417	233095508	reg1023405.p2	5.844	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-269102	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	-304429	-	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-444346	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	147921	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	176114	+	AK313163 NM_001631 BC132678 M31008 M15694	225408	+	AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal	1.064366	CTCF.p2:4:0.742	CTCF.p2:-93:0.323
chr3	12236225	12236338	reg1023447.p1	5.844	+	BC010553 NM_003256	-35431	-	BT019627 CU679743 DQ891795 DQ894978 U76456 TSC_hg19_v1_chr3_-_12200413 AK313018	-35902	-	TSC_hg19_v1_chr3_+_12045861 NM_003178 NM_133625 AK094464 BC051307 AB209088 U40215 AF077671 AF077737	-190378	+	TSC_hg19_v1_chr3_+_12329422 NM_005037 NM_138712 X90563 AK290581	93175	+	AB097931 AB107271 AB472042 NM_138711 TSC_hg19_v1_chr3_+_12330568 BC006811 AJ563370	94191	+	TSC_hg19_v1_chr3_+_12392993 NM_015869 U79012 AB451337 AB451486 U63415 AJ563369	156781	+	BC010553|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_003256|TIMP4|7079|TIMP metallopeptidase inhibitor 4##BT019627|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ891795|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ894978|TIMP4|7079|TIMP metallopeptidase inhibitor 4##U76456|TIMP4|7079|TIMP metallopeptidase inhibitor 4##AK313018|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_003178|SYN2|6854|synapsin II##NM_133625|SYN2|6854|synapsin II##AK094464|SYN2|6854|synapsin II##BC051307|SYN2|6854|synapsin II##AB209088|SYN2|6854|synapsin II##U40215|SYN2|6854|synapsin II##AF077671|SYN2|6854|synapsin II##AF077737|SYN2|6854|synapsin II##NM_005037|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138712|PPARG|5468|peroxisome proliferator-activated receptor gamma##X90563|PPARG|5468|peroxisome proliferator-activated receptor gamma##AK290581|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB097931|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB107271|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB472042|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138711|PPARG|5468|peroxisome proliferator-activated receptor gamma##BC006811|PPARG|5468|peroxisome proliferator-activated receptor gamma##AJ563370|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_015869|PPARG|5468|peroxisome proliferator-activated receptor gamma##U79012|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB451337|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB451486|PPARG|5468|peroxisome proliferator-activated receptor gamma##U63415|PPARG|5468|peroxisome proliferator-activated receptor gamma##AJ563369|PPARG|5468|peroxisome proliferator-activated receptor gamma	0.233679	
chr4	42997498	42997600	reg1023827.p1	5.844	+	AB528853 NM_001080476	-102268	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	-338461	-	NM_001080505	-597694	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	1453004	-	AK123347 NM_198353	1453274	-	AK096895 BC103995 BC103996 NM_182592	1656108	-	NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7	0.283225	CTCF.p2:-2:0.283
chr11	5912564	5912676	reg1025495.p1	5.843	+	BC136972 BC136974 NM_001005165	-7109	+	NM_001005168 BC137030 BC137041	-33673	-	NM_001005167	-49494	-	BC020770 TSC_hg19_v1_chr11_-_5959971	47289	-	NM_001003443	55956	+	NM_001146033	77103	-	BC136972|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4##BC136974|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4##NM_001005165|OR52E4|390081|olfactory receptor, family 52, subfamily E, member 4##NM_001005168|OR52E8|390079|olfactory receptor, family 52, subfamily E, member 8##BC137030|OR52E8|390079|olfactory receptor, family 52, subfamily E, member 8##BC137041|OR52E8|390079|olfactory receptor, family 52, subfamily E, member 8##NM_001005167|OR52E6|390078|olfactory receptor, family 52, subfamily E, member 6##BC020770|TRIM5|85363|tripartite motif containing 5##NM_001003443|OR56A3|390083|olfactory receptor, family 56, subfamily A, member 3##NM_001146033|OR56A5|390084|olfactory receptor, family 56, subfamily A, member 5	0.973817	CTCF.p2:17:0.974
chr8	41558955	41559066	reg1000679.p1	5.843	+	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	-36247	-	AB587362 AK057898 NM_152568	-54135	-	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	-123316	+	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	96130	-	AK026601 TSC_hg19_v1_chr8_+_41685847	126815	+	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	195300	-	AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic	0.928043	CTCF.p2:-19:0.928
chr11	47183237	47183351	reg1010612.p3	5.842	+	TSC_hg19_v1_chr11_+_46958328 AK316318 NM_001003676 NM_001003677 NM_001003678 NM_024113 AK315639 BC001860 BC009455 AL136575 BC052291 BC013988 AK300813 AK025863 AK293609 AB528079 AM393584 AM393807 CR457351 CU679361 CU680726	-225002	+	TSC_hg19_v1_chr11_-_46940102 AB384531 AB231861 BC136667 BC136668 AB084910 NM_002334 BC110808	-243232	-	TSC_hg19_v1_chr11_-_46867841 NM_001008938 NM_014756	-315441	-	AK301785 AL834337 EU832352 EU832437 AK300347 BC036823 AK027482 TSC_hg19_v1_chr11_-_47198413 AK304541 BC030148	15105	-	TSC_hg19_v1_chr11_-_47198431 AK315992 AK098324	15139	-	NM_001242832 NM_032389	15381	-	AK316318|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003676|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003677|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003678|C11orf49|79096|chromosome 11 open reading frame 49##NM_024113|C11orf49|79096|chromosome 11 open reading frame 49##AK315639|C11orf49|79096|chromosome 11 open reading frame 49##BC001860|C11orf49|79096|chromosome 11 open reading frame 49##BC009455|C11orf49|79096|chromosome 11 open reading frame 49##AL136575|C11orf49|79096|chromosome 11 open reading frame 49##BC052291|C11orf49|79096|chromosome 11 open reading frame 49##BC013988|C11orf49|79096|chromosome 11 open reading frame 49##AK300813|C11orf49|79096|chromosome 11 open reading frame 49##AK025863|C11orf49|79096|chromosome 11 open reading frame 49##AK293609|C11orf49|79096|chromosome 11 open reading frame 49##AM393584|C11orf49|79096|chromosome 11 open reading frame 49##AM393807|C11orf49|79096|chromosome 11 open reading frame 49##CR457351|C11orf49|79096|chromosome 11 open reading frame 49##AB231861|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136667|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136668|LRP4|4038|low density lipoprotein receptor-related protein 4##AB084910|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_002334|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_001008938|CKAP5|9793|cytoskeleton associated protein 5##NM_014756|CKAP5|9793|cytoskeleton associated protein 5##AK301785|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AL834337|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832352|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832437|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300347|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC036823|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK027482|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK304541|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC030148|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK315992|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK098324|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_001242832|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_032389|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2	0.943522	CTCF.p2:-3:0.944
chr1	23188710	23188814	reg1025334.p1	5.842	+	TSC_hg19_v1_chr1_+_23037331 NM_004442 NM_017449 AK299701 BC067861 AB210018 AF025304 CU686595 L36643	-151339	+	NM_000491 TSC_hg19_v1_chr1_+_22979728 BC008983	-209039	+	NM_001114101 NM_172369 AK057792 TSC_hg19_v1_chr1_+_22970125 AF087892 AK226152 BC009016 AK130613	-218575	+	NM_001242521	153580	-	TSC_hg19_v1_chr1_+_23345960 NM_001009999 NM_015013	157193	+	TSC_hg19_v1_chr1_+_23345985 AB011173 BC040194 AK290328 BC048134	157286	+	NM_004442|EPHB2|2048|EPH receptor B2##NM_017449|EPHB2|2048|EPH receptor B2##AK299701|EPHB2|2048|EPH receptor B2##BC067861|EPHB2|2048|EPH receptor B2##AB210018|EPHB2|2048|EPH receptor B2##AF025304|EPHB2|2048|EPH receptor B2##L36643|EPHB2|2048|EPH receptor B2##NM_000491|C1QB|713|complement component 1, q subcomponent, B chain##BC008983|C1QB|713|complement component 1, q subcomponent, B chain##NM_001114101|C1QC|714|complement component 1, q subcomponent, C chain##NM_172369|C1QC|714|complement component 1, q subcomponent, C chain##AK057792|C1QC|714|complement component 1, q subcomponent, C chain##AF087892|C1QC|714|complement component 1, q subcomponent, C chain##AK226152|C1QC|714|complement component 1, q subcomponent, C chain##BC009016|C1QC|714|complement component 1, q subcomponent, C chain##AK130613|C1QC|714|complement component 1, q subcomponent, C chain##NM_001242521|LOC729059|729059|uncharacterized LOC729059##NM_001009999|KDM1A|23028|lysine (K)-specific demethylase 1A##NM_015013|KDM1A|23028|lysine (K)-specific demethylase 1A##AB011173|KDM1A|23028|lysine (K)-specific demethylase 1A##BC040194|KDM1A|23028|lysine (K)-specific demethylase 1A##AK290328|KDM1A|23028|lysine (K)-specific demethylase 1A##BC048134|KDM1A|23028|lysine (K)-specific demethylase 1A	0.015727	
chr15	90190441	90190567	reg1023223.p1	5.842	+	TSC_hg19_v1_chr15_+_90118742 GQ227787 NM_152259	-71726	+	CU689056 AY257182 AF193809 NM_016321 BC015461 AK298252 AK298641 AF081497 AK301640 AK313238 BC030965 AK290899 AK310222	-150709	-	TSC_hg19_v1_chr15_-_89878042 AK291281	-312461	-	TSC_hg19_v1_chr15_-_90198681 BC042063 NM_198525	8116	-	TSC_hg19_v1_chr15_-_90222599 AB005293 BC031084 AK310907 NM_001145311 NM_002666	32105	-	BC101164 BC114384 AK297442 CR542046 CR542075 CU679445 DQ893368 DQ896686 DQ896687 DQ896688 EU176800 AK300978 BC009697 AF093668 AK313318 TSC_hg19_v1_chr15_-_90233984 AB015594 NM_003847 AK001415	43426	-	GQ227787|C15orf42|90381|chromosome 15 open reading frame 42##NM_152259|C15orf42|90381|chromosome 15 open reading frame 42##AY257182|RHCG|51458|Rh family, C glycoprotein##AF193809|RHCG|51458|Rh family, C glycoprotein##NM_016321|RHCG|51458|Rh family, C glycoprotein##BC015461|RHCG|51458|Rh family, C glycoprotein##AK298252|RHCG|51458|Rh family, C glycoprotein##AK298641|RHCG|51458|Rh family, C glycoprotein##AF081497|RHCG|51458|Rh family, C glycoprotein##AK301640|RHCG|51458|Rh family, C glycoprotein##AK313238|RHCG|51458|Rh family, C glycoprotein##BC030965|RHCG|51458|Rh family, C glycoprotein##AK290899|RHCG|51458|Rh family, C glycoprotein##AK310222|RHCG|51458|Rh family, C glycoprotein##AK291281|POLG|5428|polymerase (DNA directed), gamma##BC042063|KIF7|374654|kinesin family member 7##NM_198525|KIF7|374654|kinesin family member 7##AB005293|PLIN1|5346|perilipin 1##BC031084|PLIN1|5346|perilipin 1##NM_001145311|PLIN1|5346|perilipin 1##NM_002666|PLIN1|5346|perilipin 1##BC101164|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC114384|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK297442|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##CR542046|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##CR542075|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ893368|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896686|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896687|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896688|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##EU176800|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK300978|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC009697|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AF093668|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK313318|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AB015594|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##NM_003847|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK001415|PEX11A|8800|peroxisomal biogenesis factor 11 alpha	0.999833	CTCF.p2:14:1.000
chr3	11302319	11302415	reg1024195.p1	5.842	+	BC060802 NM_000861	-7983	+	TSC_hg19_v1_chr3_+_11267680 NM_001098211	-34694	+	NM_001098212 AK292157 AK312879	-106153	+	TSC_hg19_v1_chr3_+_11314033 NM_001136031 NM_001144912 NM_006395	11639	+	AK298833 TSC_hg19_v1_chr3_+_11314082 AK075221 AK303694	11710	+	AK314504 TSC_hg19_v1_chr3_+_11314092 BC000091 AF094516	11729	+	BC060802|HRH1|3269|histamine receptor H1##NM_000861|HRH1|3269|histamine receptor H1##NM_001098211|HRH1|3269|histamine receptor H1##NM_001098212|HRH1|3269|histamine receptor H1##AK292157|HRH1|3269|histamine receptor H1##AK312879|HRH1|3269|histamine receptor H1##NM_001136031|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_001144912|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_006395|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK298833|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK075221|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK303694|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK314504|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##BC000091|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AF094516|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)	0.969012	CTCF.p2:-10:0.969
chrX	75776363	75776459	reg1023619.p1	5.842	+	NM_020932 TSC_hg19_v1_chrX_+_75648083 AB046807 AF490507 AK291270 BC050588	-128307	+	TSC_hg19_v1_chrX_+_75392955 CU674612	-383456	+	AY927529 AY927616 BC001220 NM_016500 TSC_hg19_v1_chrX_+_75392896 AF151079 BC051894	-383572	+	AK297183 TSC_hg19_v1_chrX_-_76814315	1037855	-	L33812 TSC_hg19_v1_chrX_-_76937201	1160768	-	AB102641 BT007188 TSC_hg19_v1_chrX_-_77041551 BC002521	1265120	-	NM_020932|MAGEE1|57692|melanoma antigen family E, 1##AB046807|MAGEE1|57692|melanoma antigen family E, 1##AF490507|MAGEE1|57692|melanoma antigen family E, 1##AK291270|MAGEE1|57692|melanoma antigen family E, 1##BC050588|MAGEE1|57692|melanoma antigen family E, 1##AY927616|CXorf26|51260|chromosome X open reading frame 26##BC001220|CXorf26|51260|chromosome X open reading frame 26##NM_016500|CXorf26|51260|chromosome X open reading frame 26##BC051894|CXorf26|51260|chromosome X open reading frame 26##AK297183|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##L33812|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##AB102641|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##BT007188|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##BC002521|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked	0.944487	CTCF.p2:-6:0.944
chr10	16895370	16895478	reg1023073.p1	5.840	+	TSC_hg19_v1_chr10_-_16859451 BC015644 BC005993 BC107898 BX647733 NM_012425 NM_152724	-35989	-	TSC_hg19_v1_chr10_-_16859397 AK225681 AK312520	-36030	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	-36065	-	AF034611 NM_001081 TSC_hg19_v1_chr10_-_17171878	276409	-	TSC_hg19_v1_chr10_-_17243660 CR450316 AF045888 AK291417 AF012128 BC047733 AK303428 BX537961 AJ223333 AK299027	348309	-	NM_004412	348645	-	BC015644|RSU1|6251|Ras suppressor protein 1##BC005993|RSU1|6251|Ras suppressor protein 1##BC107898|RSU1|6251|Ras suppressor protein 1##BX647733|RSU1|6251|Ras suppressor protein 1##NM_012425|RSU1|6251|Ras suppressor protein 1##NM_152724|RSU1|6251|Ras suppressor protein 1##AK225681|RSU1|6251|Ras suppressor protein 1##AK312520|RSU1|6251|Ras suppressor protein 1##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1##AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)##NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)##CR450316|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF045888|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK291417|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF012128|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##BC047733|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK303428|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##BX537961|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AJ223333|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK299027|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##NM_004412|TRDMT1|1787|tRNA aspartic acid methyltransferase 1	0.059828	
chr1	47555141	47555252	reg1024734.p1	5.840	+	AY358631 AK292175 AY262056 NM_178134 AB527374	-22092	+	BC028102 NM_178033 AK098065 AY358537 AM040940 DQ891655 DQ891656 DQ894843 EU176287 CU688398	-65833	+	TSC_hg19_v1_chr1_-_47407149 BC022851 NM_000778	-148048	-	TSC_hg19_v1_chr1_+_47603114 BC148248 AY280371 NM_001010969 BC142690 BC142607 AY280372	47926	+	CR450304 CU680280 BC012303 TSC_hg19_v1_chr1_-_47655693	100452	-	TSC_hg19_v1_chr1_-_47655728 NM_005764	100550	-	AY358631|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##AK292175|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##AY262056|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##NM_178134|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##BC028102|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##NM_178033|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AK098065|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AY358537|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AM040940|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891655|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891656|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ894843|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##EU176287|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##BC022851|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##NM_000778|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC148248|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280371|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##NM_001010969|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142690|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142607|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280372|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##CR450304|PDZK1IP1|10158|PDZK1 interacting protein 1##BC012303|PDZK1IP1|10158|PDZK1 interacting protein 1##NM_005764|PDZK1IP1|10158|PDZK1 interacting protein 1	0.087056	
chr16	58283653	58283834	reg1023781.p1	5.840	+	DQ893025 DQ896269 AB463465 BC008812 NM_001896	-52032	-	TSC_hg19_v1_chr16_-_58163286 NM_013242	-120433	-	TSC_hg19_v1_chr16_-_58163283 AK027099 AK297819 BC005152 AF087845 AF093680	-120511	-	TSC_hg19_v1_chr16_+_58283871 AK299066 NM_001142302 NM_014157 AK314300 AL136785 BC126445 BC126447 AF161550 AB462987 AM392831 CR533506 HQ258203	125	+	AK302175 AK058068 BC057843 NM_001080492	45171	-	NM_001126129 NM_001126130 NM_022770 TSC_hg19_v1_chr16_+_58426340 AK315622 AK023974 BC014437 BC005879 CR457283	142658	+	DQ893025|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##DQ896269|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##BC008812|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##NM_001896|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##NM_013242|C16orf80|29105|chromosome 16 open reading frame 80##AK027099|C16orf80|29105|chromosome 16 open reading frame 80##AK297819|C16orf80|29105|chromosome 16 open reading frame 80##BC005152|C16orf80|29105|chromosome 16 open reading frame 80##AF087845|C16orf80|29105|chromosome 16 open reading frame 80##AF093680|C16orf80|29105|chromosome 16 open reading frame 80##AK299066|CCDC113|29070|coiled-coil domain containing 113##NM_001142302|CCDC113|29070|coiled-coil domain containing 113##NM_014157|CCDC113|29070|coiled-coil domain containing 113##AK314300|CCDC113|29070|coiled-coil domain containing 113##AL136785|CCDC113|29070|coiled-coil domain containing 113##BC126445|CCDC113|29070|coiled-coil domain containing 113##BC126447|CCDC113|29070|coiled-coil domain containing 113##AF161550|CCDC113|29070|coiled-coil domain containing 113##AM392831|CCDC113|29070|coiled-coil domain containing 113##CR533506|CCDC113|29070|coiled-coil domain containing 113##HQ258203|CCDC113|29070|coiled-coil domain containing 113##AK302175|PRSS54|221191|protease, serine, 54##AK058068|PRSS54|221191|protease, serine, 54##BC057843|PRSS54|221191|protease, serine, 54##NM_001080492|PRSS54|221191|protease, serine, 54##NM_001126129|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##NM_001126130|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##NM_022770|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##AK315622|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##AK023974|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##BC014437|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##BC005879|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##CR457283|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)	0.0	
chr17	67522255	67522380	reg1026682.p1	5.840	+	TSC_hg19_v1_chr17_+_67498396 U39064	-23837	+	AK290747 NM_002758 U39065 AK225719 X96757 BC012009	-111441	+	TSC_hg19_v1_chr17_-_67323275 BC029426 AJ512612 AJ275973 AK292592 NM_172232	-199028	-	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	549113	+	BC033038 NM_170742	578677	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	643379	+	U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6##NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6##U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6##X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC029426|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ512612|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ275973|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AK292592|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_172232|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2	0.976299	CTCF.p2:0:0.976
chr17	76989366	76989473	reg1023511.p1	5.840	+	TSC_hg19_v1_chr17_-_76976006 AK307665 BC002403 BC002998 AK295442 AK301040 AK301444 X79089 AK057776 BC015761 AK293183 AK055977 L13210 NM_005567	-13413	-	TSC_hg19_v1_chr17_-_76921470 BC071586 NM_003255	-67942	-	TSC_hg19_v1_chr17_-_76921336 M32304 J05593 S48568 BC052605	-68091	-	BC005104 TSC_hg19_v1_chr17_-_76989827	380	-	TSC_hg19_v1_chr17_-_77005820 BC017655	16361	-	TSC_hg19_v1_chr17_-_77005876 AK074687 AB097006 AB097033 AF328554 AK295930 NM_001159772 NM_001159773 NM_138793	16460	-	AK307665|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##BC002403|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##BC002998|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##AK295442|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##AK301040|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##AK301444|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##X79089|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##AK057776|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##BC015761|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##AK293183|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##AK055977|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##L13210|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##NM_005567|LGALS3BP|3959|lectin, galactoside-binding, soluble, 3 binding protein##BC071586|TIMP2|7077|TIMP metallopeptidase inhibitor 2##NM_003255|TIMP2|7077|TIMP metallopeptidase inhibitor 2##M32304|TIMP2|7077|TIMP metallopeptidase inhibitor 2##J05593|TIMP2|7077|TIMP metallopeptidase inhibitor 2##S48568|TIMP2|7077|TIMP metallopeptidase inhibitor 2##BC052605|TIMP2|7077|TIMP metallopeptidase inhibitor 2##BC005104|CANT1|124583|calcium activated nucleotidase 1##BC017655|CANT1|124583|calcium activated nucleotidase 1##AK074687|CANT1|124583|calcium activated nucleotidase 1##AB097006|CANT1|124583|calcium activated nucleotidase 1##AB097033|CANT1|124583|calcium activated nucleotidase 1##AF328554|CANT1|124583|calcium activated nucleotidase 1##AK295930|CANT1|124583|calcium activated nucleotidase 1##NM_001159772|CANT1|124583|calcium activated nucleotidase 1##NM_001159773|CANT1|124583|calcium activated nucleotidase 1##NM_138793|CANT1|124583|calcium activated nucleotidase 1	0.999814	CTCF.p2:2:1.000
chr18	54370292	54370407	reg1023309.p2	5.840	+	TSC_hg19_v1_chr18_+_54318593 AK057141 NM_015285 NM_052834 AB011113 BC150282	-51743	+	TSC_hg19_v1_chr18_-_54305956 BC001156 AF003938 NM_004786	-64435	-	AB209263 DQ891846 DQ895034 EU176640 TSC_hg19_v1_chr18_-_54305824 AF051896 AF052659 AK313653	-64602	-	TSC_hg19_v1_chr18_+_54424445 BC050352	54099	+	AK127964 TSC_hg19_v1_chr18_+_54814333 BC021740 BC035018 AK301799	443990	+	AB208996 NM_015879	649371	+	AK057141|WDR7|23335|WD repeat domain 7##NM_015285|WDR7|23335|WD repeat domain 7##NM_052834|WDR7|23335|WD repeat domain 7##AB011113|WDR7|23335|WD repeat domain 7##BC150282|WDR7|23335|WD repeat domain 7##BC001156|TXNL1|9352|thioredoxin-like 1##AF003938|TXNL1|9352|thioredoxin-like 1##NM_004786|TXNL1|9352|thioredoxin-like 1##AB209263|TXNL1|9352|thioredoxin-like 1##DQ891846|TXNL1|9352|thioredoxin-like 1##DQ895034|TXNL1|9352|thioredoxin-like 1##EU176640|TXNL1|9352|thioredoxin-like 1##AF051896|TXNL1|9352|thioredoxin-like 1##AF052659|TXNL1|9352|thioredoxin-like 1##AK313653|TXNL1|9352|thioredoxin-like 1##BC050352|WDR7|23335|WD repeat domain 7##AK127964|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC021740|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC035018|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK301799|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	0.996048	CTCF.p2:-17:0.996
chr7	633063	633243	reg1022637.p1	5.840	+	TSC_hg19_v1_chr7_-_559484 NM_002607 NM_033023	-73668	-	X03795 X06374 TSC_hg19_v1_chr7_-_559093	-74089	-	TSC_hg19_v1_chr7_-_558849 AK292217	-74319	-	AK289464 TSC_hg19_v1_chr7_-_752095 AK297337	118945	-	BC036828 TSC_hg19_v1_chr7_-_752142 AK315951 NM_002735	118994	-	NM_001164762	119423	-	NM_002607|PDGFA|5154|platelet-derived growth factor alpha polypeptide##NM_033023|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X03795|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X06374|PDGFA|5154|platelet-derived growth factor alpha polypeptide##AK292217|PDGFA|5154|platelet-derived growth factor alpha polypeptide##AK289464|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK297337|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##BC036828|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK315951|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_002735|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164762|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta	0.010175	
chr8	101484585	101484766	reg1023858.p1	5.840	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-162390	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-162494	-	AB271913 AB271914 AB029316 NM_015435	-169204	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	87265	-	AK093906 AX748361 NM_152628	177217	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	249131	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chrX	95020023	95020134	reg1025212.p1	5.840	+	NM_001171109 NM_001171110 NM_001171111 NM_173698	-2091067	+	AK090772 D50370 TSC_hg19_v1_chrX_-_92928576 BC034954 AK315176 AK223621 BC094729 AK095682 NM_004538	-2091455	-	AJ564931 NM_001168360 NM_001168361 NM_001168362 NM_001168363 AF206516 AF217288 AY861432 AY861433 AY861434 AY861435	-3929597	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	919673	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	919876	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	1118892	+	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A##NM_001171110|FAM133A|286499|family with sequence similarity 133, member A##NM_001171111|FAM133A|286499|family with sequence similarity 133, member A##NM_173698|FAM133A|286499|family with sequence similarity 133, member A##AK090772|NAP1L3|4675|nucleosome assembly protein 1-like 3##D50370|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC034954|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK315176|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK223621|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC094729|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK095682|NAP1L3|4675|nucleosome assembly protein 1-like 3##NM_004538|NAP1L3|4675|nucleosome assembly protein 1-like 3##AJ564931|PCDH11X|27328|protocadherin 11 X-linked##NM_001168360|PCDH11X|27328|protocadherin 11 X-linked##NM_001168361|PCDH11X|27328|protocadherin 11 X-linked##NM_001168362|PCDH11X|27328|protocadherin 11 X-linked##NM_001168363|PCDH11X|27328|protocadherin 11 X-linked##AF206516|PCDH11X|27328|protocadherin 11 X-linked##AF217288|PCDH11X|27328|protocadherin 11 X-linked##AY861432|PCDH11X|27328|protocadherin 11 X-linked##AY861433|PCDH11X|27328|protocadherin 11 X-linked##AY861434|PCDH11X|27328|protocadherin 11 X-linked##AY861435|PCDH11X|27328|protocadherin 11 X-linked##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa	0.97919	CTCF.p2:-20:0.979
chr15	71678905	71679052	reg1027414.p1	5.839	+	NM_024817 BC140868	-245168	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-271107	-	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	-494003	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	160602	+	AF121129 NM_014249 NM_016346 AF148128	423934	+	AK097557 NM_001166340	727620	+	NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49##AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8	0.916924	CTCF.p2:-8:0.917
chr17	11839222	11839355	reg1025028.p1	5.839	+	NM_004662 X99947	-53068	+	AJ404468 NM_001372 AF257737 AK055990 AK310137	-337521	+	AK094349 TSC_hg19_v1_chr17_+_11465221 BC105704 BC105705 BC105707 BC105706	-374092	+	AK092656 AX747657 NM_144680 TSC_hg19_v1_chr17_-_11900782 AY491053 AK127908	61465	-	TSC_hg19_v1_chr17_+_11924150 BC036032 NM_003010 BC060764 AK131544 AK313053 U17743 AK294923 L36870 BC050386 AB590846 BT019676 CR536564	84893	+	NM_001146312 NM_153604 TSC_hg19_v1_chr17_+_12569210 AY764180	729921	+	NM_004662|DNAH9|1770|dynein, axonemal, heavy chain 9##X99947|DNAH9|1770|dynein, axonemal, heavy chain 9##AJ404468|DNAH9|1770|dynein, axonemal, heavy chain 9##NM_001372|DNAH9|1770|dynein, axonemal, heavy chain 9##AF257737|DNAH9|1770|dynein, axonemal, heavy chain 9##AK055990|DNAH9|1770|dynein, axonemal, heavy chain 9##AK310137|DNAH9|1770|dynein, axonemal, heavy chain 9##AK094349|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105704|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105705|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105707|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105706|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##AK092656|ZNF18|7566|zinc finger protein 18##NM_144680|ZNF18|7566|zinc finger protein 18##AY491053|ZNF18|7566|zinc finger protein 18##AK127908|ZNF18|7566|zinc finger protein 18##BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4##NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4##U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4##L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4##CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4##NM_001146312|MYOCD|93649|myocardin##NM_153604|MYOCD|93649|myocardin##AY764180|MYOCD|93649|myocardin	0.462291	CTCF.p2:3:0.462
chr14	52940430	52940573	reg1025120.p2	5.838	+	TSC_hg19_v1_chr14_+_52781029 NM_000956 U19487 BC093927 BC093929 AY275471 X83868	-159366	+	BC040968 NM_000953 AB464671 EF577397	-206020	+	NM_007361 TSC_hg19_v1_chr14_-_52536023	-404516	-	TSC_hg19_v1_chr14_-_53019222 AK097748 BC137081 BC137082 BC144469 AB037765 BC152428 BC150205 BC142650 NM_001160047 NM_020784	78671	-	NM_001099652 AY255590 AK123953 AL834372	79434	+	CU679029 CU680454 GQ129372 GQ129373 TSC_hg19_v1_chr14_-_53162248 AK292839	221724	-	NM_000956|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##U19487|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##BC093927|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##BC093929|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##AY275471|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##X83868|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##BC040968|PTGDR|5729|prostaglandin D2 receptor (DP)##NM_000953|PTGDR|5729|prostaglandin D2 receptor (DP)##EF577397|PTGDR|5729|prostaglandin D2 receptor (DP)##NM_007361|NID2|22795|nidogen 2 (osteonidogen)##AK097748|TXNDC16|57544|thioredoxin domain containing 16##BC137081|TXNDC16|57544|thioredoxin domain containing 16##BC137082|TXNDC16|57544|thioredoxin domain containing 16##BC144469|TXNDC16|57544|thioredoxin domain containing 16##AB037765|TXNDC16|57544|thioredoxin domain containing 16##BC152428|TXNDC16|57544|thioredoxin domain containing 16##BC150205|TXNDC16|57544|thioredoxin domain containing 16##BC142650|TXNDC16|57544|thioredoxin domain containing 16##NM_001160047|TXNDC16|57544|thioredoxin domain containing 16##NM_020784|TXNDC16|57544|thioredoxin domain containing 16##NM_001099652|GPR137C|283554|G protein-coupled receptor 137C##AY255590|GPR137C|283554|G protein-coupled receptor 137C##AK123953|GPR137C|283554|G protein-coupled receptor 137C##AL834372|GPR137C|283554|G protein-coupled receptor 137C##GQ129372|ERO1L|30001|ERO1-like (S. cerevisiae)##GQ129373|ERO1L|30001|ERO1-like (S. cerevisiae)##AK292839|ERO1L|30001|ERO1-like (S. cerevisiae)	0.986665	CTCF.p2:-2:0.987
chr3	49840314	49840425	reg1000167.p2	5.838	+	BC146674 NM_001007540 AY358221 BC132756 BC144445	-3109	-	NM_001006115 NM_153273 TSC_hg19_v1_chr3_-_49823976 AK295689	-16395	-	TSC_hg19_v1_chr3_-_49823964 D87452	-16408	-	BC012170 NM_203370 TSC_hg19_v1_chr3_+_49840695	331	+	CU675375 BT007026 DQ893307 DQ893707 TSC_hg19_v1_chr3_-_49851326 BC006378	10902	-	TSC_hg19_v1_chr3_-_49851387 NM_003335 L13852	11020	-	BC146674|CDHR4|389118|cadherin-related family member 4##NM_001007540|CDHR4|389118|cadherin-related family member 4##AY358221|CDHR4|389118|cadherin-related family member 4##BC132756|CDHR4|389118|cadherin-related family member 4##NM_001006115|IP6K1|9807|inositol hexakisphosphate kinase 1##NM_153273|IP6K1|9807|inositol hexakisphosphate kinase 1##AK295689|IP6K1|9807|inositol hexakisphosphate kinase 1##D87452|IP6K1|9807|inositol hexakisphosphate kinase 1##BC012170|FAM212A|389119|family with sequence similarity 212, member A##NM_203370|FAM212A|389119|family with sequence similarity 212, member A##BT007026|UBA7|7318|ubiquitin-like modifier activating enzyme 7##DQ893307|UBA7|7318|ubiquitin-like modifier activating enzyme 7##DQ893707|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BC006378|UBA7|7318|ubiquitin-like modifier activating enzyme 7##NM_003335|UBA7|7318|ubiquitin-like modifier activating enzyme 7##L13852|UBA7|7318|ubiquitin-like modifier activating enzyme 7	0.0	
chr4	119191690	119191845	reg1025989.p1	5.838	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	-236192	+	TSC_hg19_v1_chr4_+_118954764 AY358852	-236996	+	AK074617 BC030831 NM_152402	-1185034	-	TSC_hg19_v1_chr4_+_119199912 BC017993 BC039555	8150	+	TSC_hg19_v1_chr4_-_119273910 AJ001531 BC007761 NM_003619	82158	-	TSC_hg19_v1_chr4_+_119512929 AK024248	321167	+	AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC017993|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##BC039555|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##AJ001531|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC007761|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##NM_003619|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##AK024248|LOC729218|729218|uncharacterized LOC729218	0.990792	CTCF.p2:20:0.991
chr10	71173073	71173253	reg1025427.p1	5.837	+	TSC_hg19_v1_chr10_+_71078629 BC008730 DQ893281 DQ896762 CU679065 AB384968	-94498	+	AK309904 TSC_hg19_v1_chr10_+_71078627	-94536	+	TSC_hg19_v1_chr10_+_71078602 AK292012 NM_000188 AK294428 AB209526 M75126	-94564	+	AK300649 BC033742 AK291996 NM_001057	3457	-	TSC_hg19_v1_chr10_+_71211220 NM_012339 BC003157 BC004161 AF120266	38098	+	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	38170	+	BC008730|HK1|3098|hexokinase 1##DQ893281|HK1|3098|hexokinase 1##DQ896762|HK1|3098|hexokinase 1##AK309904|HK1|3098|hexokinase 1##AK292012|HK1|3098|hexokinase 1##NM_000188|HK1|3098|hexokinase 1##AK294428|HK1|3098|hexokinase 1##AB209526|HK1|3098|hexokinase 1##M75126|HK1|3098|hexokinase 1##AK300649|TACR2|6865|tachykinin receptor 2##BC033742|TACR2|6865|tachykinin receptor 2##AK291996|TACR2|6865|tachykinin receptor 2##NM_001057|TACR2|6865|tachykinin receptor 2##NM_012339|TSPAN15|23555|tetraspanin 15##BC003157|TSPAN15|23555|tetraspanin 15##BC004161|TSPAN15|23555|tetraspanin 15##AF120266|TSPAN15|23555|tetraspanin 15	0.66811	CTCF.p2:34:0.668
chr11	106455940	106456052	reg1026274.p2	5.837	+	NM_152433 NM_198439	-507532	-	AF136978 AF151057 AF151838 AF302110 NM_015423 TSC_hg19_v1_chr11_+_105948388 BC016728 AK312529 BC015470 AK293362 AB463408 CU677695 DQ891342 DQ894524	-507631	+	TSC_hg19_v1_chr11_-_105892952 AL834523 BC041118 AB058729 NM_032424	-563037	-	BC085622 TSC_hg19_v1_chr11_-_106889260 BC130484 BC130488 BC144033 NM_000855 X63282 Z50053	433092	-	AK293001 TSC_hg19_v1_chr11_-_107328552 BX649022 BX647832 BC107418 BC070142 BX648704 AK126881 NM_152434	872543	-	AK293603 TSC_hg19_v1_chr11_-_107436464 BC015183 AK304413 AB218768 AK095523 NM_138775	980448	-	NM_152433|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##NM_198439|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##AF136978|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151057|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151838|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF302110|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##NM_015423|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC016728|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK312529|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC015470|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK293362|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ891342|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ894524|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AL834523|KIAA1826|84437|KIAA1826##BC041118|KIAA1826|84437|KIAA1826##AB058729|KIAA1826|84437|KIAA1826##NM_032424|KIAA1826|84437|KIAA1826##BC130484|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC130488|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC144033|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_000855|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##X63282|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##Z50053|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##AK293001|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX649022|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX647832|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC107418|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC070142|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX648704|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK126881|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##NM_152434|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK293603|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##BC015183|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK304413|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AB218768|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK095523|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##NM_138775|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)	0.175442	
chr20	61687872	61688006	reg1022696.p1	5.837	+	BC137288 BC137308 NM_080606	-49553	-	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-103814	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-103909	+	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	159584	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	179402	+	TSC_hg19_v1_chr20_-_61884664 AK308958	196794	-	BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7##AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4	1.027034	CTCF.p2:11:1.000
chr5	89457411	89457549	reg1026694.p1	5.837	+	AL833268 AL833274 NM_001131005 NM_001193347	-1257586	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1272216	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-1272360	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	248059	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	312702	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	313098	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.335511	CTCF.p2:33:0.336
chr8	56852364	56852505	reg1022510.p1	5.837	+	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-59914	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	-60039	+	TSC_hg19_v1_chr8_+_56792383 M16038 NM_001111097 NM_002350 BC126456 BC126458	-60069	+	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	134652	-	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	174106	-	TSC_hg19_v1_chr8_-_57123833 U65002	271401	-	AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M16038|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_001111097|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_002350|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126456|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126458|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1	0.0	
chr1	150968475	150968613	reg1021364.p1	5.836	+	NM_003568 AJ009985	-14019	+	TSC_hg19_v1_chr1_-_150947489 NM_022075 NM_181746	-21070	-	TSC_hg19_v1_chr1_-_150947321 AK001105	-21231	-	BC032321 AK303962 AK125493 AK002142 NM_001163259 NM_001163260 TSC_hg19_v1_chr1_-_150979325 BC014447 NM_001040217	10587	-	BC075812 AK301946 NM_001163258 NM_018379	12302	-	TSC_hg19_v1_chr1_+_150980936 AK315120 AF051907 AF123538 BC014886 BC025304 NM_021222 AF123539 AK294154 BC063481 DQ892819 DQ896065 AB528544	12457	+	NM_003568|ANXA9|8416|annexin A9##AJ009985|ANXA9|8416|annexin A9##NM_022075|CERS2|29956|ceramide synthase 2##NM_181746|CERS2|29956|ceramide synthase 2##AK001105|CERS2|29956|ceramide synthase 2##BC032321|FAM63A|55793|family with sequence similarity 63, member A##AK303962|FAM63A|55793|family with sequence similarity 63, member A##AK125493|FAM63A|55793|family with sequence similarity 63, member A##AK002142|FAM63A|55793|family with sequence similarity 63, member A##NM_001163259|FAM63A|55793|family with sequence similarity 63, member A##NM_001163260|FAM63A|55793|family with sequence similarity 63, member A##BC014447|FAM63A|55793|family with sequence similarity 63, member A##NM_001040217|FAM63A|55793|family with sequence similarity 63, member A##BC075812|FAM63A|55793|family with sequence similarity 63, member A##AK301946|FAM63A|55793|family with sequence similarity 63, member A##NM_001163258|FAM63A|55793|family with sequence similarity 63, member A##NM_018379|FAM63A|55793|family with sequence similarity 63, member A##AK315120|PRUNE|58497|prune homolog (Drosophila)##AF051907|PRUNE|58497|prune homolog (Drosophila)##AF123538|PRUNE|58497|prune homolog (Drosophila)##BC014886|PRUNE|58497|prune homolog (Drosophila)##BC025304|PRUNE|58497|prune homolog (Drosophila)##NM_021222|PRUNE|58497|prune homolog (Drosophila)##AF123539|PRUNE|58497|prune homolog (Drosophila)##AK294154|PRUNE|58497|prune homolog (Drosophila)##BC063481|PRUNE|58497|prune homolog (Drosophila)##DQ892819|PRUNE|58497|prune homolog (Drosophila)##DQ896065|PRUNE|58497|prune homolog (Drosophila)	0.980603	CTCF.p2:26:0.981
chr15	23887675	23887815	reg1024841.p2	5.836	+	AK309383 TSC_hg19_v1_chr15_+_23810820 BC044639 BC013970 BC070293 EU446987 CU692226	-76877	+	NM_005664	-77292	+	TSC_hg19_v1_chr15_-_23378229 AF041081 AF041080	-509501	-	NM_019066 TSC_hg19_v1_chr15_-_23893004	5259	-	AB464627 CU679085 TSC_hg19_v1_chr15_-_23932396	44635	-	TSC_hg19_v1_chr15_-_23932453 U35139 BC008750 AK312779 AK129654 NM_002487	44687	-	BC044639|MKRN3|7681|makorin ring finger protein 3##BC070293|MKRN3|7681|makorin ring finger protein 3##EU446987|MKRN3|7681|makorin ring finger protein 3##NM_005664|MKRN3|7681|makorin ring finger protein 3##AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041080|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##NM_019066|MAGEL2|54551|MAGE-like 2##U35139|NDN|4692|necdin homolog (mouse)##BC008750|NDN|4692|necdin homolog (mouse)##AK312779|NDN|4692|necdin homolog (mouse)##AK129654|NDN|4692|necdin homolog (mouse)##NM_002487|NDN|4692|necdin homolog (mouse)	0.982244	CTCF.p2:0:0.982
chr6	163602320	163602444	reg1027372.p1	5.836	+	AF546872 NM_001080379 BC030642	-453366	+	TSC_hg19_v1_chr6_-_163148808 NM_004562 NM_013987 NM_013988	-453566	-	TSC_hg19_v1_chr6_-_163148799 AB009973	-453584	-	TSC_hg19_v1_chr6_+_163835675 AB067798 AB067799 AB067800 AB067801 NM_006775 NM_206853 NM_206854 NM_206855	233290	+	TSC_hg19_v1_chr6_+_163835795 AF272349	233408	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	233850	+	AF546872|PACRG|135138|PARK2 co-regulated##NM_001080379|PACRG|135138|PARK2 co-regulated##BC030642|PACRG|135138|PARK2 co-regulated##NM_004562|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##NM_013987|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##NM_013988|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB009973|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB067798|QKI|9444|QKI, KH domain containing, RNA binding##AB067799|QKI|9444|QKI, KH domain containing, RNA binding##AB067800|QKI|9444|QKI, KH domain containing, RNA binding##AB067801|QKI|9444|QKI, KH domain containing, RNA binding##NM_006775|QKI|9444|QKI, KH domain containing, RNA binding##NM_206853|QKI|9444|QKI, KH domain containing, RNA binding##NM_206854|QKI|9444|QKI, KH domain containing, RNA binding##NM_206855|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding	0.025701	
chr6_ssto_hap7	4091418	4091540	reg1025153.p1	5.836	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.517049	CTCF.p2:5:0.517
chr7	77763759	77763849	reg1024500.p1	5.836	+	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-294295	+	BC067742 TSC_hg19_v1_chr7_+_77428204 AL136883	-335594	+	TSC_hg19_v1_chr7_+_77428194 NM_001127358 NM_001127360 AK225854 AK090643 AX746556 AK308289	-335663	+	AB014605 BC150277 AK297353 AF038563 NM_012301	1319075	-	TSC_hg19_v1_chr7_+_79083303 AK311103	1319353	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	2000335	+	BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##BC067742|PHTF2|57157|putative homeodomain transcription factor 2##AL136883|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2##AK225854|PHTF2|57157|putative homeodomain transcription factor 2##AK090643|PHTF2|57157|putative homeodomain transcription factor 2##AK308289|PHTF2|57157|putative homeodomain transcription factor 2##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1	0.0	
chr8	51310865	51310979	reg1024492.p2	5.836	+	AJ003030 NM_018967	-486326	+	NM_001007176 BC017981 AJ276240	-1326013	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-1477012	-	EU170240 AY877349 NM_144651	1411031	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	1500680	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	1500805	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.80802	CTCF.p2:-8:0.808
chr9	140589789	140589900	reg1022605.p1	5.836	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-76377	+	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	-76401	+	TSC_hg19_v1_chr9_-_140513273 BC011781 AF267857 NM_032937	-76551	-	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	48685	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	182390	+	TSC_hg19_v1_chr9_+_140918045 AB209467	328230	+	BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC011781|C9orf37|85026|chromosome 9 open reading frame 37##AF267857|C9orf37|85026|chromosome 9 open reading frame 37##NM_032937|C9orf37|85026|chromosome 9 open reading frame 37##AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit	0.949455	CTCF.p2:0:0.949
chr15	54100412	54100541	reg1028271.p1	5.835	+	AK096055 BX537884 NM_182758	-48629	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-1018282	-	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	-1129595	-	NM_001080534	204624	+	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	1388616	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	1388703	-	AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1	0.644849	CTCF.p2:12:0.645
chr15	99495700	99495862	reg1023356.p2	5.835	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-303025	+	TSC_hg19_v1_chr15_+_99191767 AB425196	-303810	+	AK097062 AK097062 NM_182562	-438171	-	BC104743 BC104744 BC105686 NM_001102612	53056	-	AK058162 NM_001167902	55242	-	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	149459	+	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein	0.0	
chr2	241434509	241434623	reg1024644.p1	5.835	+	TSC_hg19_v1_chr2_+_241375269 AK223516 BC045712	-59301	+	TSC_hg19_v1_chr2_+_241375207 BC027997	-59355	+	TSC_hg19_v1_chr2_+_241375079 BC051279 NM_002081 X54232	-59486	+	AK125881 TSC_hg19_v1_chr2_-_241495084	60464	-	AB034636 BC073146 BC036111 TSC_hg19_v1_chr2_-_241497400	62817	-	AK000506 AK225534 NM_016552 NM_017844 TSC_hg19_v1_chr2_-_241497404	62838	-	AK223516|GPC1|2817|glypican 1##BC045712|GPC1|2817|glypican 1##BC027997|GPC1|2817|glypican 1##BC051279|GPC1|2817|glypican 1##NM_002081|GPC1|2817|glypican 1##X54232|GPC1|2817|glypican 1##AK125881|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AB034636|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##BC073146|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##BC036111|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK000506|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK225534|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_016552|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_017844|ANKMY1|51281|ankyrin repeat and MYND domain containing 1	0.830069	CTCF.p2:-24:0.830
chr6	21595045	21595168	reg1024472.p4	5.835	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	-734	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1060383	+	CR749285 NM_001243076	-1191073	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	71553	+	BC015850 NM_000948	702623	-	X54394 X54393 GQ305133 M58594 NM_001163558	707941	-	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin	0.0	
chr18	77958263	77958362	reg1023964.p2	5.834	+	TSC_hg19_v1_chr18_+_77905812 AK056304	-52445	+	AK292566 TSC_hg19_v1_chr18_+_77867161 AB020670	-91144	+	BC071589 NM_014913	-91398	+	AB044556 AB178535 AB178536 AB527962 TSC_hg19_v1_chr18_-_78005398 BC060797 NM_032510	47047	-	None	None	None	None	None	None	AK056304|LOC100130522|100130522|uncharacterized LOC100130522##AK292566|ADNP2|22850|ADNP homeobox 2##AB020670|ADNP2|22850|ADNP homeobox 2##BC071589|ADNP2|22850|ADNP homeobox 2##NM_014913|ADNP2|22850|ADNP homeobox 2##AB044556|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##AB178535|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##AB178536|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##BC060797|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)##NM_032510|PARD6G|84552|par-6 partitioning defective 6 homolog gamma (C. elegans)	0.521507	CTCF.p2:-6:0.522
chr2	44518928	44519058	reg1025077.p1	5.834	+	NM_000341 BC022386 AK309145 AK313157 AB033549 AK091932 AK289636 L11696 M95548 AK223146 BC093624 BC093626 D82326 CU692594 DQ892031 DQ895222 DQ023513 DQ023515 DQ023516 DQ023517	-16358	+	TSC_hg19_v1_chr2_+_44396066 AL833035	-122883	+	TSC_hg19_v1_chr2_+_44396013 NM_001033556 NM_001033557 NM_002706 NM_177968 NM_177969 AK056009 AK291214 DQ023508 DQ023509 DQ023510 DQ023511 BC064381 AJ271832 AJ271835 BC012002	-122978	+	BC143061 BC143062 DQ023506 DQ023507 NM_001042385 NM_001042386	67877	-	DQ023503 DQ023504 DQ023505 NM_006036	68819	-	AB007896 TSC_hg19_v1_chr2_-_44588634 BC151236 AK025649 NM_001171606 NM_001171613	69687	-	NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AL833035|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_001033556|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_001033557|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_002706|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177968|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177969|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK056009|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK291214|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023508|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023509|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023510|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023511|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC064381|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271832|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271835|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC012002|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC143061|PREPL|9581|prolyl endopeptidase-like##BC143062|PREPL|9581|prolyl endopeptidase-like##DQ023506|PREPL|9581|prolyl endopeptidase-like##DQ023507|PREPL|9581|prolyl endopeptidase-like##NM_001042385|PREPL|9581|prolyl endopeptidase-like##NM_001042386|PREPL|9581|prolyl endopeptidase-like##DQ023503|PREPL|9581|prolyl endopeptidase-like##DQ023504|PREPL|9581|prolyl endopeptidase-like##DQ023505|PREPL|9581|prolyl endopeptidase-like##NM_006036|PREPL|9581|prolyl endopeptidase-like##AB007896|PREPL|9581|prolyl endopeptidase-like##BC151236|PREPL|9581|prolyl endopeptidase-like##AK025649|PREPL|9581|prolyl endopeptidase-like##NM_001171606|PREPL|9581|prolyl endopeptidase-like##NM_001171613|PREPL|9581|prolyl endopeptidase-like	0.846835	CTCF.p2:11:0.805
chr3	59198142	59198322	reg1005397.p2	5.834	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-162472	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-162491	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-162524	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	2038858	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	2348979	+	BC047734 TSC_hg19_v1_chr3_+_61547294	2349054	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.0	
chr1	143986580	143986679	reg1025053.p2	5.833	+	AK307197 TSC_hg19_v1_chr1_-_143913122 AB096683 NM_207418	-73499	-	HQ258079 BC130376 BC130378 NM_001123068	-218765	-	BC071624 BC132962 AK097058 AK310056 TSC_hg19_v1_chr1_-_143744413 AK310186 AK309393	-242224	-	BC130376 BC130378 AB084917 NM_001135789 NM_001143883 NM_178230	377595	-	BC061517 BC073170 BC009950 BC094809 TSC_hg19_v1_chr1_-_144520932	534302	-	TSC_hg19_v1_chr1_-_144520998 BC063535 BC021732	534377	-	AK307197|FAM72D|728833|family with sequence similarity 72, member D##AB096683|FAM72D|728833|family with sequence similarity 72, member D##NM_207418|FAM72D|728833|family with sequence similarity 72, member D##HQ258079|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##NM_001123068|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC071624|FLJ39739|388685|uncharacterized FLJ39739##BC132962|LOC100286793|100286793|uncharacterized LOC100286793##AK097058|FLJ39739|388685|uncharacterized FLJ39739##AK310056|FLJ39739|388685|uncharacterized FLJ39739##AK310186|FLJ39739|388685|uncharacterized FLJ39739##AK309393|FLJ39739|388685|uncharacterized FLJ39739##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC061517|LOC728855|728855|uncharacterized LOC728855##BC073170|LOC728855|728855|uncharacterized LOC728855##BC009950|LOC728855|728855|uncharacterized LOC728855##BC094809|LOC728855|728855|uncharacterized LOC728855##BC063535|LOC728855|728855|uncharacterized LOC728855##BC021732|LOC728855|728855|uncharacterized LOC728855	0.029568	
chr11	64627038	64627218	reg1022580.p1	5.833	+	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	-15039	-	AJ297488 AJ297489 NM_130803 NM_130804	-48363	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	-48934	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	18854	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	19026	-	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	20033	-	AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I##AY007161|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1	0.0	
chr1	29562900	29562991	reg1022955.p1	5.833	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-5498	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-5565	-	NM_005626 TSC_hg19_v1_chr1_-_29508638	-54306	-	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	103	+	TSC_hg19_v1_chr1_+_31191648 AK057725	1628686	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	1633487	-	AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_005626|SRSF4|6429|serine/arginine-rich splicing factor 4##NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein	0.932608	CTCF.p2:3:0.933
chr16	54227677	54227769	reg1021424.p1	5.833	+	TSC_hg19_v1_chr16_+_53738067 AK096554 AB051539 AK295196	-489655	+	NM_001080432	-489849	+	TSC_hg19_v1_chr16_-_53737760 BC136433 AK096333 AK308390 BC017977 CR749645 AK307929 EF565106 NM_001127897 NM_015272 AK304790	-489966	-	BC034328 TSC_hg19_v1_chr16_-_54319025	91241	-	TSC_hg19_v1_chr16_+_54319531 AK309303	91798	+	DQ892008 EU176666 TSC_hg19_v1_chr16_-_54320043	92283	-	AK096554|FTO|79068|fat mass and obesity associated##AB051539|FTO|79068|fat mass and obesity associated##AK295196|FTO|79068|fat mass and obesity associated##NM_001080432|FTO|79068|fat mass and obesity associated##BC136433|RPGRIP1L|23322|RPGRIP1-like##AK096333|RPGRIP1L|23322|RPGRIP1-like##AK308390|RPGRIP1L|23322|RPGRIP1-like##BC017977|RPGRIP1L|23322|RPGRIP1-like##CR749645|RPGRIP1L|23322|RPGRIP1-like##AK307929|RPGRIP1L|23322|RPGRIP1-like##EF565106|RPGRIP1L|23322|RPGRIP1-like##NM_001127897|RPGRIP1L|23322|RPGRIP1-like##NM_015272|RPGRIP1L|23322|RPGRIP1-like##AK304790|RPGRIP1L|23322|RPGRIP1-like##BC034328|IRX3|79191|iroquois homeobox 3##DQ892008|IRX3|79191|iroquois homeobox 3##EU176666|IRX3|79191|iroquois homeobox 3	0.153275	
chr2	13583819	13583926	reg1024716.p1	5.833	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-725475	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	-725956	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-726619	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	1188949	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	1188979	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	2117557	-	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence	0.259985	CTCF.p2:-36:0.260
chr4	25146624	25146750	reg1026428.p1	5.833	+	AB067503 AF467955 AJ487516 AJ487958 BC101759 BC101761 NM_018176 TSC_hg19_v1_chr4_-_25032569	-114250	-	AK302905 AL834257 NM_173463	-164890	-	AK125353 BC057761 BC067735 NM_001130726 TSC_hg19_v1_chr4_-_24914655	-232106	-	AF146396 AJ277541 BC117202 BC126213 TSC_hg19_v1_chr4_-_25162072 AJ238617 EU832146 EU832239 BC023539 BX648976 BC012188 AK292476 NM_016955	15368	-	AK296302 AK095450 TSC_hg19_v1_chr4_+_25162325	15618	+	TSC_hg19_v1_chr4_+_25235654 BC051749 NM_018323 AK128622 AK001967 AY091514 AY065990 AF411320	89031	+	AB067503|LGI2|55203|leucine-rich repeat LGI family, member 2##AF467955|LGI2|55203|leucine-rich repeat LGI family, member 2##AJ487516|LGI2|55203|leucine-rich repeat LGI family, member 2##AJ487958|LGI2|55203|leucine-rich repeat LGI family, member 2##BC101759|LGI2|55203|leucine-rich repeat LGI family, member 2##BC101761|LGI2|55203|leucine-rich repeat LGI family, member 2##NM_018176|LGI2|55203|leucine-rich repeat LGI family, member 2##AK302905|CCDC149|91050|coiled-coil domain containing 149##AL834257|CCDC149|91050|coiled-coil domain containing 149##NM_173463|CCDC149|91050|coiled-coil domain containing 149##AK125353|CCDC149|91050|coiled-coil domain containing 149##BC057761|CCDC149|91050|coiled-coil domain containing 149##BC067735|CCDC149|91050|coiled-coil domain containing 149##NM_001130726|CCDC149|91050|coiled-coil domain containing 149##AF146396|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ277541|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC117202|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC126213|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ238617|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832146|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832239|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC023539|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BX648976|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC012188|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AK292476|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##NM_016955|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AK296302|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK095450|LOC285540|285540|uncharacterized LOC285540##BC051749|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##NM_018323|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK128622|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK001967|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AY091514|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AY065990|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AF411320|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta	0.952441	CTCF.p2:3:0.952
chr11	308085	308212	reg1017454.p1	5.832	+	BC150562 BC150563 NM_001025295	-8627	-	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	-19006	+	AF479748 AY154461 NM_138329	-29579	+	NM_006435 TSC_hg19_v1_chr11_+_308199 BC009696 DQ891667 DQ894615 BT009859 CR456894 CR541874 X02490	22	+	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	5863	+	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	12696	-	BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##AF479748|NLRP6|171389|NLR family, pyrin domain containing 6##AY154461|NLRP6|171389|NLR family, pyrin domain containing 6##NM_138329|NLRP6|171389|NLR family, pyrin domain containing 6##NM_006435|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC009696|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ891667|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ894615|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BT009859|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR456894|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR541874|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##X02490|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3	0.0	
chr3	192520873	192521005	reg1026664.p1	5.832	+	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	-75574	-	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-394096	-	AY858112 NM_001083308	-1341988	+	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	114697	-	BC036194 BC045582 NM_178496	115002	-	TSC_hg19_v1_chr3_+_192958897 BC048095 NM_020386	437965	+	AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2##BC048095|HRASLS|57110|HRAS-like suppressor##NM_020386|HRASLS|57110|HRAS-like suppressor	0.990506	CTCF.p2:9:0.991
chr6	229227	229349	reg1023649.p1	5.832	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	62797	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	63209	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	162476	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.0	
chr11	71457467	71457599	reg1027265.p1	5.831	+	BC130498 BC130502 AB126080 NM_001005405	-163619	-	AB126079 BC137550 BC137566 NM_001012710	-180925	+	NM_005553 X63755 BC101744 AB126078 CU686892 BC069531	-197949	+	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	41074	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	67373	-	AF529416 NM_001002035	86712	+	BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11##AB126079|KRTAP5-10|387273|keratin associated protein 5-10##BC137550|KRTAP5-10|387273|keratin associated protein 5-10##BC137566|KRTAP5-10|387273|keratin associated protein 5-10##NM_001012710|KRTAP5-10|387273|keratin associated protein 5-10##NM_005553|KRTAP5-9|3846|keratin associated protein 5-9##X63755|KRTAP5-9|3846|keratin associated protein 5-9##BC101744|KRTAP5-9|3846|keratin associated protein 5-9##AB126078|KRTAP5-9|3846|keratin associated protein 5-9##BC069531|KRTAP5-9|3846|keratin associated protein 5-9##NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1##BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene##AF529416|DEFB108B|245911|defensin, beta 108B##NM_001002035|DEFB108B|245911|defensin, beta 108B	0.0	
chr1	215780024	215780154	reg1025486.p1	5.831	+	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	-39226	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	-523479	+	NM_001017424	-601205	+	AF055580 AY481573 NM_007123 NM_206933	816648	-	HQ692853 AF117255 BC008218 AY388456 AK291647 TSC_hg19_v1_chr1_-_216896791 AB020639 AK290945 BC064700 NM_001243515 NM_001243518 NM_001243519 NM_001438	1116637	-	AY388461 NM_001243514	1198619	-	BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2##AF055580|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##AY481573|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_007123|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_206933|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##HQ692853|ESRRG|2104|estrogen-related receptor gamma##AF117255|ESRRG|2104|estrogen-related receptor gamma##BC008218|ESRRG|2104|estrogen-related receptor gamma##AY388456|ESRRG|2104|estrogen-related receptor gamma##AK291647|ESRRG|2104|estrogen-related receptor gamma##AB020639|ESRRG|2104|estrogen-related receptor gamma##AK290945|ESRRG|2104|estrogen-related receptor gamma##BC064700|ESRRG|2104|estrogen-related receptor gamma##NM_001243515|ESRRG|2104|estrogen-related receptor gamma##NM_001243518|ESRRG|2104|estrogen-related receptor gamma##NM_001243519|ESRRG|2104|estrogen-related receptor gamma##NM_001438|ESRRG|2104|estrogen-related receptor gamma##AY388461|ESRRG|2104|estrogen-related receptor gamma##NM_001243514|ESRRG|2104|estrogen-related receptor gamma	0.998785	CTCF.p2:26:0.999
chr2	143962843	143962968	reg1028089.p1	5.831	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	-75914	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	-75975	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-327665	+	NM_024659	1032000	-	AY281366 NM_001006636	1089154	-	BC017741 AK291357 TSC_hg19_v1_chr2_-_145090037 BC061699	1127127	-	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1##AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1##BC017741|GTDC1|79712|glycosyltransferase-like domain containing 1##AK291357|GTDC1|79712|glycosyltransferase-like domain containing 1##BC061699|GTDC1|79712|glycosyltransferase-like domain containing 1	0.974541	CTCF.p2:32:0.975
chr5	79070510	79070632	reg1027920.p1	5.831	+	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-84899	+	AK095818 TSC_hg19_v1_chr5_+_78908395	-162150	+	TSC_hg19_v1_chr5_+_78908296 BC026061	-162256	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	216387	-	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	260593	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	481314	-	BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##AK095818|PAPD4|167153|PAP associated domain containing 4##BC026061|PAPD4|167153|PAP associated domain containing 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5	0.636381	CTCF.p2:5:0.622
chr6	123268650	123268756	reg1023713.p2	5.831	+	TSC_hg19_v1_chr6_+_123110402 AK000184 BC018999 BC066591 AK301365 DQ892207 DQ895402 CU676352	-158286	+	NM_006714	-158733	+	AK311867 TSC_hg19_v1_chr6_+_123100861 AK289836 AK307272 AJ002962 AB208815 U51338 D50373 D88648 AL512688 U81235 CR457057 DQ891437 DQ894613 EU176601	-167804	+	TSC_hg19_v1_chr6_+_123317379 AK295158	48680	+	BC101377 BC101376 NM_001010852	48877	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	689386	-	AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK311867|FABP7|2173|fatty acid binding protein 7, brain##AK289836|FABP7|2173|fatty acid binding protein 7, brain##AJ002962|FABP7|2173|fatty acid binding protein 7, brain##U51338|FABP7|2173|fatty acid binding protein 7, brain##D50373|FABP7|2173|fatty acid binding protein 7, brain##D88648|FABP7|2173|fatty acid binding protein 7, brain##AL512688|FABP7|2173|fatty acid binding protein 7, brain##U81235|FABP7|2173|fatty acid binding protein 7, brain##CR457057|FABP7|2173|fatty acid binding protein 7, brain##DQ891437|FABP7|2173|fatty acid binding protein 7, brain##DQ894613|FABP7|2173|fatty acid binding protein 7, brain##EU176601|FABP7|2173|fatty acid binding protein 7, brain##AK295158|CLVS2|134829|clavesin 2##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin	0.831045	CTCF.p2:-1:0.831
chr9	139030599	139030740	reg1028509.p1	5.831	+	TSC_hg19_v1_chr9_-_139010722 NM_152833	-19940	-	BC014304 BC013282 TSC_hg19_v1_chr9_-_139010700 AK023162 AK091349 AX746927 BC021231	-19999	-	BC092490 BC111053 TSC_hg19_v1_chr9_-_139010485	-20234	-	AB590758 AB593065 AF156889 NM_014564 AB593066 TSC_hg19_v1_chr9_-_139095090	64319	-	AF156888 NM_178138 AB593067 AB593063 AB593062	66295	-	BC047604 AB527428 TSC_hg19_v1_chr9_-_139137659 AJ318051 NM_181701	107016	-	NM_152833|C9orf69|90120|chromosome 9 open reading frame 69##BC014304|C9orf69|90120|chromosome 9 open reading frame 69##BC013282|C9orf69|90120|chromosome 9 open reading frame 69##AK023162|C9orf69|90120|chromosome 9 open reading frame 69##AK091349|C9orf69|90120|chromosome 9 open reading frame 69##BC021231|C9orf69|90120|chromosome 9 open reading frame 69##BC092490|C9orf69|90120|chromosome 9 open reading frame 69##BC111053|C9orf69|90120|chromosome 9 open reading frame 69##AB593065|LHX3|8022|LIM homeobox 3##AF156889|LHX3|8022|LIM homeobox 3##NM_014564|LHX3|8022|LIM homeobox 3##AB593066|LHX3|8022|LIM homeobox 3##AF156888|LHX3|8022|LIM homeobox 3##NM_178138|LHX3|8022|LIM homeobox 3##AB593067|LHX3|8022|LIM homeobox 3##AB593063|LHX3|8022|LIM homeobox 3##AB593062|LHX3|8022|LIM homeobox 3##BC047604|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##AJ318051|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##NM_181701|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2	0.996362	CTCF.p2:-12:0.996
chr9	43341413	43341542	reg1027081.p1	5.831	+	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-207990	-	NM_001099279 NM_199244	-624244	+	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	-973119	+	NM_001145196	289252	-	TSC_hg19_v1_chr9_+_43684876 NM_001201380	343366	+	TSC_hg19_v1_chr9_+_45441926 BC006438	2100449	+	AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##BC006438|LOC100132167|100132167|uncharacterized LOC100132167	0.415484	CTCF.p2:3:0.415
chr19	45074265	45074375	reg1025484.p1	5.830	+	EU008600 EU008601 EU008602 EU008603 NM_001102597 NM_001102598 NM_001102599 NM_001102600	-40773	-	BC113015 BC051903 TSC_hg19_v1_chr19_-_45004551 BC033642 AF192913 AK024047 AK122688 AK315193 NM_013256	-69778	-	TSC_hg19_v1_chr19_-_44952641 AB209357 AF192979 NM_014518 CR936724	-121623	-	TSC_hg19_v1_chr19_+_45116925 NM_001205280	42610	+	TSC_hg19_v1_chr19_+_45147159 NM_001135768 NM_001135769 NM_001135770 NM_006505	72811	+	TSC_hg19_v1_chr19_+_45147180 AK290946	72861	+	EU008600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##EU008601|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##EU008602|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##EU008603|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001102597|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001102598|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001102599|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001102600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##BC113015|ZNF180|7733|zinc finger protein 180##BC051903|ZNF180|7733|zinc finger protein 180##BC033642|ZNF180|7733|zinc finger protein 180##AF192913|ZNF180|7733|zinc finger protein 180##AK024047|ZNF180|7733|zinc finger protein 180##AK122688|ZNF180|7733|zinc finger protein 180##AK315193|ZNF180|7733|zinc finger protein 180##NM_013256|ZNF180|7733|zinc finger protein 180##AB209357|ZNF229|7772|zinc finger protein 229##AF192979|ZNF229|7772|zinc finger protein 229##NM_014518|ZNF229|7772|zinc finger protein 229##CR936724|ZNF229|7772|zinc finger protein 229##NM_001205280|IGSF23|147710|immunoglobulin superfamily, member 23##NM_001135768|PVR|5817|poliovirus receptor##NM_001135769|PVR|5817|poliovirus receptor##NM_001135770|PVR|5817|poliovirus receptor##NM_006505|PVR|5817|poliovirus receptor##AK290946|PVR|5817|poliovirus receptor	0.98617	CTCF.p2:-9:0.986
chr3	47866361	47866498	reg1022765.p2	5.830	+	AK096791 TSC_hg19_v1_chr3_+_47844627 BC020126 BC038417 BC015029 AB020697 BC063510	-21773	+	BC047335 NM_014966 NM_138615 TSC_hg19_v1_chr3_+_47844624 BC028405 AK291266	-21918	+	TSC_hg19_v1_chr3_-_47823419 AK302541	-42922	-	TSC_hg19_v1_chr3_+_47866475 AK002076	59	+	TSC_hg19_v1_chr3_-_47934000 AK054696	67601	-	TSC_hg19_v1_chr3_-_47957477 BX649077	91114	-	AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC047335|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##NM_014966|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##NM_138615|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC028405|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK291266|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK302541|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1##AK002076|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK054696|MAP4|4134|microtubule-associated protein 4	0.671514	CTCF.p2:14:0.672
chr4	155320785	155320894	reg1024441.p1	5.830	+	AY354497 NM_017639	-8391	-	BC008666 AK075372 AK093922 TSC_hg19_v1_chr4_-_154710236 AF311912 NM_003013	-610615	-	BC034385 NM_173662	-639453	-	TSC_hg19_v1_chr4_-_155412411 AY354498 BC140919	91643	-	AK127704 NM_001142552 NM_001142553 TSC_hg19_v1_chr4_-_155412931	92068	-	BC106004 TSC_hg19_v1_chr4_-_155471547 AK307997 AK304574 BC036046 BC020786 AK002108 NM_001201564 NM_002669	150714	-	AY354497|DCHS2|54798|dachsous 2 (Drosophila)##NM_017639|DCHS2|54798|dachsous 2 (Drosophila)##BC008666|SFRP2|6423|secreted frizzled-related protein 2##AK075372|SFRP2|6423|secreted frizzled-related protein 2##AK093922|SFRP2|6423|secreted frizzled-related protein 2##AF311912|SFRP2|6423|secreted frizzled-related protein 2##NM_003013|SFRP2|6423|secreted frizzled-related protein 2##BC034385|RNF175|285533|ring finger protein 175##NM_173662|RNF175|285533|ring finger protein 175##AY354498|DCHS2|54798|dachsous 2 (Drosophila)##BC140919|DCHS2|54798|dachsous 2 (Drosophila)##AK127704|DCHS2|54798|dachsous 2 (Drosophila)##NM_001142552|DCHS2|54798|dachsous 2 (Drosophila)##NM_001142553|DCHS2|54798|dachsous 2 (Drosophila)##BC106004|PLRG1|5356|pleiotropic regulator 1##AK307997|PLRG1|5356|pleiotropic regulator 1##AK304574|PLRG1|5356|pleiotropic regulator 1##BC036046|PLRG1|5356|pleiotropic regulator 1##BC020786|PLRG1|5356|pleiotropic regulator 1##AK002108|PLRG1|5356|pleiotropic regulator 1##NM_001201564|PLRG1|5356|pleiotropic regulator 1##NM_002669|PLRG1|5356|pleiotropic regulator 1	0.730727	CTCF.p2:-12:0.731
chr6	130096386	130096520	reg1024713.p2	5.830	+	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	-65127	-	NM_000426 NM_001079823 Z26653	-892140	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-1254797	-	NM_001010876	85962	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	243272	+	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	440002	-	BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3	0.994187	CTCF.p2:16:0.994
chr8	107016742	107016836	reg1022882.p1	5.830	+	AF119334 BC109222 BC109223 NM_012082	-685643	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-1415542	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-1415614	-	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	265634	+	AK296561 NM_001198532	443362	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	653199	+	AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1	0.992854	CTCF.p2:-11:0.993
chr21	48059794	48059929	reg1025468.p1	5.829	+	TSC_hg19_v1_chr21_+_48055589 BC100026	-4247	+	AK223157 TSC_hg19_v1_chr21_+_48055585 BC000727	-4275	+	NM_001242864 NM_001242865 NM_001242866 NM_001535 NM_206962 TSC_hg19_v1_chr21_+_48055572 AK123352 AY786414 FJ436410 FJ436411 FJ436412 U79286 X99209 U80213 AK312573 AL833586	-4318	+	None	None	None	None	None	None	None	None	None	BC100026|PRMT2|3275|protein arginine methyltransferase 2##AK223157|PRMT2|3275|protein arginine methyltransferase 2##BC000727|PRMT2|3275|protein arginine methyltransferase 2##NM_001242864|PRMT2|3275|protein arginine methyltransferase 2##NM_001242865|PRMT2|3275|protein arginine methyltransferase 2##NM_001242866|PRMT2|3275|protein arginine methyltransferase 2##NM_001535|PRMT2|3275|protein arginine methyltransferase 2##NM_206962|PRMT2|3275|protein arginine methyltransferase 2##AK123352|PRMT2|3275|protein arginine methyltransferase 2##AY786414|PRMT2|3275|protein arginine methyltransferase 2##FJ436410|PRMT2|3275|protein arginine methyltransferase 2##FJ436411|PRMT2|3275|protein arginine methyltransferase 2##FJ436412|PRMT2|3275|protein arginine methyltransferase 2##U79286|PRMT2|3275|protein arginine methyltransferase 2##X99209|PRMT2|3275|protein arginine methyltransferase 2##U80213|PRMT2|3275|protein arginine methyltransferase 2##AK312573|PRMT2|3275|protein arginine methyltransferase 2##AL833586|PRMT2|3275|protein arginine methyltransferase 2	0.992795	CTCF.p2:18:0.993
chr22	42908392	42908517	reg1024052.p2	5.829	+	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	-80073	-	BC038245 TSC_hg19_v1_chr22_-_42765218	-143252	-	AB527391 NM_005650 NM_181492	-297077	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	7313	-	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	7360	-	BC041802 AK294584 AL450314 NM_014509 AK295223 BC119650 BC119651 BC127635 BC127636 CR456455 AL589866 AL590118 AL590120 CU013005 CU013293	41492	+	CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK294584|SERHL2|253190|serine hydrolase-like 2##AL450314|SERHL2|253190|serine hydrolase-like 2##NM_014509|SERHL2|253190|serine hydrolase-like 2##AK295223|SERHL2|253190|serine hydrolase-like 2##BC119650|SERHL2|253190|serine hydrolase-like 2##BC119651|SERHL2|253190|serine hydrolase-like 2##BC127635|SERHL2|253190|serine hydrolase-like 2##BC127636|SERHL2|253190|serine hydrolase-like 2##CR456455|SERHL2|253190|serine hydrolase-like 2##AL589866|SERHL2|253190|serine hydrolase-like 2##AL590118|SERHL2|253190|serine hydrolase-like 2##AL590120|SERHL2|253190|serine hydrolase-like 2##CU013005|SERHL2|253190|serine hydrolase-like 2##CU013293|SERHL2|253190|serine hydrolase-like 2	0.727216	CTCF.p2:-31:0.727
chr3	132361197	132361312	reg1024786.p2	5.829	+	NM_178445	-42274	+	AK304461 NM_016557 AK313923 AF110640 BC069438	-45146	+	AB014578 BC151246 TSC_hg19_v1_chr3_+_132136540 AY779857 BC043583 NM_015268	-224727	+	NM_198329	12035	+	TSC_hg19_v1_chr3_+_132378761 AK310239	17495	+	AL833721 TSC_hg19_v1_chr3_-_132378654 AX803785 AX803783 BC125204 BC125205 AJ608287 AL832873 AK131265 AK308380 NM_032169	17592	-	NM_178445|CCRL1|51554|chemokine (C-C motif) receptor-like 1##AK304461|CCRL1|51554|chemokine (C-C motif) receptor-like 1##NM_016557|CCRL1|51554|chemokine (C-C motif) receptor-like 1##AK313923|CCRL1|51554|chemokine (C-C motif) receptor-like 1##AF110640|CCRL1|51554|chemokine (C-C motif) receptor-like 1##BC069438|CCRL1|51554|chemokine (C-C motif) receptor-like 1##AB014578|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC151246|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AY779857|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC043583|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##NM_015268|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##NM_198329|UBA5|79876|ubiquitin-like modifier activating enzyme 5##AK310239|UBA5|79876|ubiquitin-like modifier activating enzyme 5##AL833721|ACAD11|84129|acyl-CoA dehydrogenase family, member 11##AX803785|ACAD11|84129|acyl-CoA dehydrogenase family, member 11##AX803783|ACAD11|84129|acyl-CoA dehydrogenase family, member 11##BC125204|ACAD11|84129|acyl-CoA dehydrogenase family, member 11##BC125205|ACAD11|84129|acyl-CoA dehydrogenase family, member 11##AJ608287|ACAD11|84129|acyl-CoA dehydrogenase family, member 11##AL832873|ACAD11|84129|acyl-CoA dehydrogenase family, member 11##AK131265|ACAD11|84129|acyl-CoA dehydrogenase family, member 11##AK308380|ACAD11|84129|acyl-CoA dehydrogenase family, member 11##NM_032169|ACAD11|84129|acyl-CoA dehydrogenase family, member 11	0.832467	CTCF.p2:25:0.832
chr3	42702506	42702637	reg1025009.p1	5.828	+	TSC_hg19_v1_chr3_+_42700837 AL133062 BC021855	-1699	+	AK127065 NM_145166	-7396	+	NM_001201572	-60000	-	TSC_hg19_v1_chr3_+_42704598 AB033016	2027	+	AY176040 AY177390 NM_152393 AK056577 AK291294 AK300682 TSC_hg19_v1_chr3_+_42727028 BC110491	24455	+	NM_020707	41747	-	AL133062|ZBTB47|92999|zinc finger and BTB domain containing 47##BC021855|ZBTB47|92999|zinc finger and BTB domain containing 47##AK127065|ZBTB47|92999|zinc finger and BTB domain containing 47##NM_145166|ZBTB47|92999|zinc finger and BTB domain containing 47##NM_001201572|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AB033016|ZBTB47|92999|zinc finger and BTB domain containing 47##AY176040|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AY177390|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##NM_152393|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AK056577|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AK291294|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##AK300682|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##BC110491|KBTBD5|131377|kelch repeat and BTB (POZ) domain containing 5##NM_020707|HHATL|57467|hedgehog acyltransferase-like	0.234477	
chr6	13383949	13384090	reg1021601.p1	5.828	+	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	-55319	-	AK091836 AX747210 NM_001242698	-88202	-	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-666976	+	AK027010 NM_001242630	24349	-	AK055131 AF264036 NM_001242628	102379	-	TSC_hg19_v1_chr6_-_13487051 BC148295 BC119005 BC124557	103078	-	AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AK055131|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF264036|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242628|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC148295|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC119005|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC124557|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr20	4201905	4202086	reg1024050.p2	5.827	+	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	-72472	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	-72560	+	AL096778 NM_007219 BC039584 TSC_hg19_v1_chr20_-_3996221 BC000213 BC003141 NM_001134337 NM_001134338 BC032738	-205830	-	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	27595	-	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	464981	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	500539	+	AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##AL096778|RNF24|11237|ring finger protein 24##NM_007219|RNF24|11237|ring finger protein 24##BC039584|RNF24|11237|ring finger protein 24##BC000213|RNF24|11237|ring finger protein 24##NM_001134337|RNF24|11237|ring finger protein 24##NM_001134338|RNF24|11237|ring finger protein 24##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)	0.862743	CTCF.p2:-21:0.863
chr1	200835706	200835880	reg1019971.p1	5.826	+	TSC_hg19_v1_chr1_+_200708732 AK095640 NM_203459	-127122	+	TSC_hg19_v1_chr1_-_200639091 BC041801 NM_001031725	-196685	-	AK299219 BC020201 TSC_hg19_v1_chr1_-_200639024 AL136611 BC014183 AK307569	-196764	-	BC126386 BC126388 AK315339 NM_005298	6330	+	TSC_hg19_v1_chr1_+_200860668 NM_018265 AK001583 AK001763 BC106877	24853	+	AK316510 NM_001142569 TSC_hg19_v1_chr1_+_200864027 AK303885	28204	+	AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##BC041801|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_001031725|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK299219|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC020201|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AL136611|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC014183|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK307569|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC126386|GPR25|2848|G protein-coupled receptor 25##BC126388|GPR25|2848|G protein-coupled receptor 25##AK315339|GPR25|2848|G protein-coupled receptor 25##NM_005298|GPR25|2848|G protein-coupled receptor 25##NM_018265|C1orf106|55765|chromosome 1 open reading frame 106##AK001583|C1orf106|55765|chromosome 1 open reading frame 106##AK001763|C1orf106|55765|chromosome 1 open reading frame 106##BC106877|C1orf106|55765|chromosome 1 open reading frame 106##AK316510|C1orf106|55765|chromosome 1 open reading frame 106##NM_001142569|C1orf106|55765|chromosome 1 open reading frame 106##AK303885|C1orf106|55765|chromosome 1 open reading frame 106	0.0	
chr15	83680358	83680514	reg1010199.p3	5.826	+	TSC_hg19_v1_chr15_-_83680376 NM_001160113 NM_001160114 NM_001160115 NM_001160116 NM_144597	-56	-	TSC_hg19_v1_chr15_-_83680364 AK311484 AK125586 BC019820 AK312160	-87	-	NM_031452 TSC_hg19_v1_chr15_+_83654965 BC112329 AK027095 BC003627 BC027181	-25458	+	TSC_hg19_v1_chr15_-_83735995 AB462966 AF529369 AM393763 AY364253 DQ891458 DQ894635 CU688394 BC017464 AK000731 AK225355 AK225362 AF355402 AF257241 AL136853	55508	-	TSC_hg19_v1_chr15_-_83736005 BC028097	55568	-	NM_001011885 NM_025238 TSC_hg19_v1_chr15_-_83736124	55679	-	NM_001160113|C15orf40|123207|chromosome 15 open reading frame 40##NM_001160114|C15orf40|123207|chromosome 15 open reading frame 40##NM_001160115|C15orf40|123207|chromosome 15 open reading frame 40##NM_001160116|C15orf40|123207|chromosome 15 open reading frame 40##NM_144597|C15orf40|123207|chromosome 15 open reading frame 40##AK311484|C15orf40|123207|chromosome 15 open reading frame 40##AK125586|C15orf40|123207|chromosome 15 open reading frame 40##BC019820|C15orf40|123207|chromosome 15 open reading frame 40##AK312160|C15orf40|123207|chromosome 15 open reading frame 40##NM_031452|FAM103A1|83640|family with sequence similarity 103, member A1##BC112329|FAM103A1|83640|family with sequence similarity 103, member A1##AK027095|FAM103A1|83640|family with sequence similarity 103, member A1##BC003627|FAM103A1|83640|family with sequence similarity 103, member A1##BC027181|FAM103A1|83640|family with sequence similarity 103, member A1##AF529369|BTBD1|53339|BTB (POZ) domain containing 1##AM393763|BTBD1|53339|BTB (POZ) domain containing 1##AY364253|BTBD1|53339|BTB (POZ) domain containing 1##DQ891458|BTBD1|53339|BTB (POZ) domain containing 1##DQ894635|BTBD1|53339|BTB (POZ) domain containing 1##BC017464|BTBD1|53339|BTB (POZ) domain containing 1##AK000731|BTBD1|53339|BTB (POZ) domain containing 1##AK225355|BTBD1|53339|BTB (POZ) domain containing 1##AK225362|BTBD1|53339|BTB (POZ) domain containing 1##AF355402|BTBD1|53339|BTB (POZ) domain containing 1##AF257241|BTBD1|53339|BTB (POZ) domain containing 1##AL136853|BTBD1|53339|BTB (POZ) domain containing 1##BC028097|BTBD1|53339|BTB (POZ) domain containing 1##NM_001011885|BTBD1|53339|BTB (POZ) domain containing 1##NM_025238|BTBD1|53339|BTB (POZ) domain containing 1	0.0	
chr3	23803037	23803152	reg1023792.p4	5.826	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	-558339	+	TSC_hg19_v1_chr3_+_23244600 AK307075	-558511	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-1388960	-	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	44316	+	AK314854 TSC_hg19_v1_chr3_+_23847474	44380	+	AK295354 NM_001202476	48839	+	AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK310298|ZNF385D|79750|zinc finger protein 385D##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##AK314854|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_001202476|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.0	
chr11	92822823	92822950	reg1025181.p2	5.825	+	BC069163 NM_005959 U25341 AY521019	-120047	+	NM_001008781	-737625	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-2838476	+	TSC_hg19_v1_chr11_-_92930978 CU690400	108101	-	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	108199	-	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	240957	+	BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B##NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67	0.972103	CTCF.p2:-10:0.972
chr18	23739429	23739579	reg1023018.p1	5.825	+	BC042820 NM_001025096 NM_001025097 NM_144662 BC025393 BC028371 BC028686 BC025389 BC047355 BC021713	-25656	+	AB527567 EU832762 GQ129305 AB300354 AB300355 AB300356 AB300357 AF230662 AF244972 AF257500 AF343880 BC096221 BC096222 BC096223 BC096224 CR542088 CR542103 X79201 TSC_hg19_v1_chr18_-_23670574 AK304305 AK316302 AK316338 AK299082 AK307923 AK289510 NM_001007559 NM_005637 AK301504	-68924	-	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	-807341	-	TSC_hg19_v1_chr18_+_23806444 NM_005640 AB234096	66913	+	NM_001142730 TSC_hg19_v1_chr18_-_24128518	389006	-	AK289870 BC063652 TSC_hg19_v1_chr18_-_24129261 NM_001136205	389737	-	BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##EU832762|SS18|6760|synovial sarcoma translocation, chromosome 18##GQ129305|SS18|6760|synovial sarcoma translocation, chromosome 18##AF244972|SS18|6760|synovial sarcoma translocation, chromosome 18##AF343880|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096221|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096222|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096223|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096224|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542088|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542103|SS18|6760|synovial sarcoma translocation, chromosome 18##X79201|SS18|6760|synovial sarcoma translocation, chromosome 18##AK304305|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316302|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316338|SS18|6760|synovial sarcoma translocation, chromosome 18##AK299082|SS18|6760|synovial sarcoma translocation, chromosome 18##AK307923|SS18|6760|synovial sarcoma translocation, chromosome 18##AK289510|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001007559|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_005637|SS18|6760|synovial sarcoma translocation, chromosome 18##AK301504|SS18|6760|synovial sarcoma translocation, chromosome 18##AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521##NM_005640|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##AB234096|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1##AK289870|KCTD1|284252|potassium channel tetramerisation domain containing 1##BC063652|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001136205|KCTD1|284252|potassium channel tetramerisation domain containing 1	0.570144	CTCF.p2:11:0.570
chr1_gl000192_random	115647	115803	reg1023413.p1	5.825	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.627479	CTCF.p2:14:0.627
chr21	35881592	35881691	reg1019609.p1	5.825	+	AK311384 AY789479 EU008568 EU008569 AK313543 BC036452 NM_001127668 NM_001127669	-49763	-	AY789480 NM_001127670 EU008570	-53569	-	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	-133816	+	AK304336 NM_000219 BC069055	2011	-	TSC_hg19_v1_chr21_-_35884509 AK095442 BC046224	2896	-	CR542065 AK299444 TSC_hg19_v1_chr21_-_35899121 AK293293 U85267 NM_203418	17512	-	AK311384|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AY789479|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008568|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008569|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK313543|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC036452|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127668|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127669|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AK304336|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_000219|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC069055|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK095442|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC046224|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##CR542065|RCAN1|1827|regulator of calcineurin 1##AK299444|RCAN1|1827|regulator of calcineurin 1##AK293293|RCAN1|1827|regulator of calcineurin 1##U85267|RCAN1|1827|regulator of calcineurin 1##NM_203418|RCAN1|1827|regulator of calcineurin 1	0.909015	CTCF.p2:23:0.876
chr3	170527408	170527538	reg1027788.p1	5.825	+	TSC_hg19_v1_chr3_-_170303774 AK122655 NM_020949	-223655	-	AK098766 NM_001185056 AK294087	-388432	+	NM_005602 TSC_hg19_v1_chr3_+_170136652 AK294108 AK312923 BC013577	-390815	+	TSC_hg19_v1_chr3_-_170587985 BC107708 AL110170 BC062731 NM_001099645	60522	-	TSC_hg19_v1_chr3_-_170626397 AK311962 BC036072	98918	-	AY205258 AY205259 AY205260 AY205261 NM_020390 TSC_hg19_v1_chr3_-_170626427	98986	-	AK122655|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_020949|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_001185056|CLDN11|5010|claudin 11##AK294087|CLDN11|5010|claudin 11##NM_005602|CLDN11|5010|claudin 11##AK312923|CLDN11|5010|claudin 11##BC013577|CLDN11|5010|claudin 11##BC107708|RPL22L1|200916|ribosomal protein L22-like 1##AL110170|RPL22L1|200916|ribosomal protein L22-like 1##BC062731|RPL22L1|200916|ribosomal protein L22-like 1##NM_001099645|RPL22L1|200916|ribosomal protein L22-like 1##AK311962|EIF5A2|56648|eukaryotic translation initiation factor 5A2##BC036072|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205258|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205259|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205260|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205261|EIF5A2|56648|eukaryotic translation initiation factor 5A2##NM_020390|EIF5A2|56648|eukaryotic translation initiation factor 5A2	0.030246	
chr4	26163191	26163303	reg1025579.p1	5.825	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-247383	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-298693	-	NM_001177999 AK314514	-505157	+	L07875 BC020780 NM_005349 NM_203283	158072	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	159062	+	TSC_hg19_v1_chr4_+_26322635 AK302230	159389	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.020581	
chr11	76131073	76131208	reg1028147.p1	5.824	+	TSC_hg19_v1_chr11_+_76092383 AK125821 BC040665 AK095089	-38717	+	TSC_hg19_v1_chr11_-_76091995 AB590785 AF007393 AF081567 HQ258648 NM_004705 AK291843 BC117138 BC117140 BC110304	-39132	-	TSC_hg19_v1_chr11_-_75921806 AK075540	-209336	-	TSC_hg19_v1_chr11_-_76155721 AK054718	24585	-	TSC_hg19_v1_chr11_+_76156061 AK304043 BC033404 NM_020193 AK309621 BC021688 AK125114	24963	+	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	249828	-	AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK075540|WNT11|7481|wingless-type MMTV integration site family, member 11##AK304043|C11orf30|56946|chromosome 11 open reading frame 30##BC033404|C11orf30|56946|chromosome 11 open reading frame 30##NM_020193|C11orf30|56946|chromosome 11 open reading frame 30##AK309621|C11orf30|56946|chromosome 11 open reading frame 30##BC021688|C11orf30|56946|chromosome 11 open reading frame 30##AK125114|C11orf30|56946|chromosome 11 open reading frame 30##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32	0.965313	CTCF.p2:-7:0.965
chr5	90162248	90162378	reg1024222.p1	5.824	+	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	-307699	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-336947	-	NM_006467 AK295434 U93868	-391611	+	AK091866 TSC_hg19_v1_chr5_-_90610220	447932	-	TSC_hg19_v1_chr5_+_90676181 BC043415	513849	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	516819	-	AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3	0.943863	CTCF.p2:-22:0.944
chr6	286880	287060	reg1025411.p2	5.824	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	5115	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	5527	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	104794	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.012929	
chr12	122028662	122028810	reg1022101.p2	5.823	+	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	-9822	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	-10477	-	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	-123662	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	35907	+	BC057760 NM_173855	78823	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	122008	+	BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B	0.0	
chr17	72562444	72562560	reg1023764.p1	5.823	+	TSC_hg19_v1_chr17_-_72542250 BC022279 NM_006678	-20240	-	X66171 TSC_hg19_v1_chr17_-_72542230	-20313	-	TSC_hg19_v1_chr17_-_72527597 DQ893585 DQ896833 BC028091 AK290925 AK298665 NM_174892	-34900	-	AK056444 NM_152460	18554	+	EF137868 NM_001115152 AY358148	25893	-	BC100888 BC100889 BC100890 AK298031 AF395839 BX648376 AK303545 NM_181449	57343	-	BC022279|CD300C|10871|CD300c molecule##NM_006678|CD300C|10871|CD300c molecule##X66171|CD300C|10871|CD300c molecule##DQ893585|CD300LB|124599|CD300 molecule-like family member b##DQ896833|CD300LB|124599|CD300 molecule-like family member b##BC028091|CD300LB|124599|CD300 molecule-like family member b##AK290925|CD300LB|124599|CD300 molecule-like family member b##AK298665|CD300LB|124599|CD300 molecule-like family member b##NM_174892|CD300LB|124599|CD300 molecule-like family member b##AK056444|C17orf77|146723|chromosome 17 open reading frame 77##NM_152460|C17orf77|146723|chromosome 17 open reading frame 77##EF137868|CD300LD|100131439|CD300 molecule-like family member d##NM_001115152|CD300LD|100131439|CD300 molecule-like family member d##AY358148|CD300LD|100131439|CD300 molecule-like family member d##BC100888|CD300E|342510|CD300e molecule##BC100889|CD300E|342510|CD300e molecule##BC100890|CD300E|342510|CD300e molecule##AK298031|CD300E|342510|CD300e molecule##AF395839|CD300E|342510|CD300e molecule##BX648376|CD300E|342510|CD300e molecule##AK303545|CD300E|342510|CD300e molecule##NM_181449|CD300E|342510|CD300e molecule	0.0	
chr22	35200722	35200868	reg1023517.p1	5.823	+	AJ007583 AB011181 NM_004737 NM_133642	-884425	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-1746440	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-1798069	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	261354	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	452681	+	AK293694 NM_001135729	494472	+	AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)	0.216093	
chr6_cox_hap2	3206888	3206993	reg1023436.p1	5.823	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.016416	
chr9	69043736	69043874	reg1026873.p1	5.823	+	TSC_hg19_v1_chr9_+_68726468 AK311167	-317303	+	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	-1116989	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-2490530	+	TSC_hg19_v1_chr9_+_69065493 AK311167	21733	+	NM_001085476	158398	-	AF265442 BC069006 AK293173 NM_001085457	218749	-	AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6	0.0	
chr11	132182590	132182754	reg1027281.p1	5.822	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-401333	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-402048	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-942203	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	630342	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	630933	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	1219642	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.66986	CTCF.p2:28:0.590
chr2	217561586	217561729	reg1021998.p1	5.822	+	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-1397	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-2091	-	L27560 AF147308 TSC_hg19_v1_chr2_-_217540846	-20873	-	BC029516 NM_003284	163124	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	1247124	-	AK001785 TSC_hg19_v1_chr2_-_218843551	1281889	-	AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##L27560|IGFBP5|3488|insulin-like growth factor binding protein 5##AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5##BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1	0.018982	
chr6	112098680	112098823	reg1025403.p2	5.822	+	BC032496 NM_153048	-18443	-	AB451293 AB451426 AB528738 CU689398 S74774 NM_153047	-57493	-	NM_001164281 NM_147686	-171278	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	95784	-	TSC_hg19_v1_chr6_-_112194648 NM_002037	95904	-	BC012028 NM_003880 BC035250 NM_198239 BC105940 BC105941 AY358349 AF100781 AY358350 AB075040	276666	+	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##AB451293|FYN|2534|FYN oncogene related to SRC, FGR, YES##AB451426|FYN|2534|FYN oncogene related to SRC, FGR, YES##S74774|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153047|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_001164281|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_147686|TRAF3IP2|10758|TRAF3 interacting protein 2##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_002037|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3##AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3	0.640746	CTCF.p2:2:0.641
chr10	47696406	47696524	reg1023654.p2	5.821	+	BC171820 BC171845 BC171847 NM_001190810	-482840	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	-514781	-	AB590156 CU687256 DQ893430 DQ896775 M81844 AK296573 AK300139 AK300158 BC021910 BC004376 NM_001098845 AK296976 Z36830 BC073755 NM_001040084 AK298761	-522446	-	NM_001630 BC008813 BC073755 AK096715 AK313626 X16662 BC029890 AK300191 AK223149 AK307182 CU679125 CU687256	50550	+	NM_018232	197557	+	BC171820 BC171845 BC171847 NM_001190810	519258	+	BC171845|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171847|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##NM_001190810|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##DQ893430|ANXA8L2|244|annexin A8-like 2##DQ896775|ANXA8|653145|annexin A8##M81844|ANXA8|653145|annexin A8##AK296573|ANXA8|653145|annexin A8##AK300139|ANXA8|653145|annexin A8##AK300158|ANXA8|653145|annexin A8##BC004376|ANXA8|653145|annexin A8##NM_001098845|ANXA8L1|728113|annexin A8-like 1##Z36830|ANXA8|653145|annexin A8##BC073755|ANXA8|653145|annexin A8##NM_001040084|ANXA8|653145|annexin A8##AK298761|ANXA8|653145|annexin A8##NM_001630|ANXA8L2|244|annexin A8-like 2##BC008813|ANXA8L2|244|annexin A8-like 2##BC073755|ANXA8|653145|annexin A8##AK313626|ANXA8L2|244|annexin A8-like 2##X16662|ANXA8L2|244|annexin A8-like 2##AK300191|ANXA8L2|244|annexin A8-like 2##AK223149|ANXA8L2|244|annexin A8-like 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##BC171845|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171847|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##NM_001190810|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9	0.914634	CTCF.p2:-11:0.915
chr15	101797158	101797266	reg1025158.p2	5.821	+	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	-5077	-	AB071402 TSC_hg19_v1_chr15_-_101791795	-5476	-	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-337700	+	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	20451	-	TSC_hg19_v1_chr15_-_101835402 AB528428 CU692724 AJ130971 AJ130972 DQ892838 DQ896084 BC071717	38169	-	TSC_hg19_v1_chr15_-_101835457 AK223110 AK312200 X13482 BC022816 AK290078 AK223070 BC067846 NM_003090	38219	-	BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S##AJ130971|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AJ130972|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##DQ892838|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##DQ896084|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC071717|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK223110|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK312200|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##X13482|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC022816|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK290078|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK223070|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC067846|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##NM_003090|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'	0.017382	
chr5	51953141	51953303	reg1025289.p1	5.821	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	-1273969	+	BC031213 NM_002202	-1274265	+	TSC_hg19_v1_chr5_+_49962920 AB463183 AM393004	-1990295	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	130767	+	AK025729 BC007650 TSC_hg19_v1_chr5_+_52095991 BC005889 BC007249 AF132951 AK312633 AF139828 BC022789	142764	+	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	331898	+	AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##BC031213|ISL1|3670|ISL LIM homeobox 1##NM_002202|ISL1|3670|ISL LIM homeobox 1##AM393004|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1##AK025729|PELO|53918|pelota homolog (Drosophila)##BC007650|PELO|53918|pelota homolog (Drosophila)##BC005889|PELO|53918|pelota homolog (Drosophila)##BC007249|PELO|53918|pelota homolog (Drosophila)##AF132951|PELO|53918|pelota homolog (Drosophila)##AK312633|PELO|53918|pelota homolog (Drosophila)##AF139828|PELO|53918|pelota homolog (Drosophila)##BC022789|PELO|53918|pelota homolog (Drosophila)##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	0.999105	CTCF.p2:1:0.999
chr1	12114374	12114555	reg1024324.p4	5.820	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-34894	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-34930	+	FJ618905 NM_021933	-35166	+	M83554 NM_001243 BC136400 BC171762 S75768	9080	+	D86042 BC063482 NM_152942 BC073839 BC141804	71552	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	112597	+	AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr5	40166590	40166693	reg1021517.p1	5.820	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-741324	-	TSC_hg19_v1_chr5_-_39425082 AK314381	-741577	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	-741690	-	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	513386	+	TSC_hg19_v1_chr5_+_40680042 L25124	513403	+	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	589399	-	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33	0.099469	
chr6	130560238	130560374	reg1024060.p1	5.819	+	AK091882 AX747235 NM_001017373	-16208	-	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	-23851	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	-220581	+	AB052099 NM_052913	197955	+	BC113027 NM_001195597 AK091900 AX747243 BC101422 BC101423 BC101424 BC101425 BC113026 TSC_hg19_v1_chr6_+_131148577	588256	+	TSC_hg19_v1_chr6_-_131291480 AK307764 NM_001199389	731245	-	AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A##BC113027|LOC100507203|100507203|uncharacterized LOC100507203##NM_001195597|LOC100507203|100507203|uncharacterized LOC100507203##AK091900|LOC100507203|100507203|uncharacterized LOC100507203##BC101422|LOC100507203|100507203|uncharacterized LOC100507203##BC101423|LOC100507203|100507203|uncharacterized LOC100507203##BC101424|LOC100507203|100507203|uncharacterized LOC100507203##BC101425|LOC100507203|100507203|uncharacterized LOC100507203##BC113026|LOC100507203|100507203|uncharacterized LOC100507203##AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	0.305849	CTCF.p2:-14:0.306
chr11	118796656	118796836	reg1022423.p1	5.818	+	AB094091 NM_182557	-15134	-	NM_032966 X68829	-32646	+	AK291512 NM_001716 BC110352 X68149 AB464488	-42186	+	NM_006760 Y13645 BC113900 AY455312 AB009454	30317	+	AB094092 NM_181721 BC028191 BC125040 BC038969	45732	+	TSC_hg19_v1_chr11_+_118868847 AB094093 NM_198489	72103	+	AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_006760|UPK2|7379|uroplakin 2##Y13645|UPK2|7379|uroplakin 2##BC113900|UPK2|7379|uroplakin 2##AY455312|UPK2|7379|uroplakin 2##AB009454|UPK2|7379|uroplakin 2##AB094092|FOXR1|283150|forkhead box R1##NM_181721|FOXR1|283150|forkhead box R1##BC028191|FOXR1|283150|forkhead box R1##BC125040|FOXR1|283150|forkhead box R1##BC038969|FOXR1|283150|forkhead box R1##AB094093|CCDC84|338657|coiled-coil domain containing 84##NM_198489|CCDC84|338657|coiled-coil domain containing 84	0.0	
chr6_mcf_hap5	3778674	3778784	reg1020889.p1	5.818	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.943967	CTCF.p2:-1:0.944
chr4	1630983	1631076	reg1022129.p1	5.817	+	AK126919 NM_175918	-245690	+	TSC_hg19_v1_chr4_+_1341031 BC110331 AB040963 NM_020894 BC140901	-289761	+	TSC_hg19_v1_chr4_+_1283693 AK296174 AK022515 AY236486 AK308901 AF084928 BC006470 AY189687 BT006957	-347323	+	BC070112 NM_001013622 BC042071 NM_001174070	54823	-	BT007433 CU677395 DQ892370 DQ895579 Z71188 NM_006527 U75679 BC014908 BC015703 AK315635 TSC_hg19_v1_chr4_-_1714047 AK300826 AK091735 AX747152 AK093314	82963	-	TSC_hg19_v1_chr4_-_1722813 AK303880	91847	-	AK126919|CRIPAK|285464|cysteine-rich PAK1 inhibitor##NM_175918|CRIPAK|285464|cysteine-rich PAK1 inhibitor##BC110331|KIAA1530|57654|KIAA1530##AB040963|KIAA1530|57654|KIAA1530##NM_020894|KIAA1530|57654|KIAA1530##BC140901|KIAA1530|57654|KIAA1530##AK296174|MAEA|10296|macrophage erythroblast attacher##AK022515|MAEA|10296|macrophage erythroblast attacher##AY236486|MAEA|10296|macrophage erythroblast attacher##AK308901|MAEA|10296|macrophage erythroblast attacher##AF084928|MAEA|10296|macrophage erythroblast attacher##BC006470|MAEA|10296|macrophage erythroblast attacher##AY189687|MAEA|10296|macrophage erythroblast attacher##BT006957|MAEA|10296|macrophage erythroblast attacher##BC070112|FAM53A|152877|family with sequence similarity 53, member A##NM_001013622|FAM53A|152877|family with sequence similarity 53, member A##BC042071|FAM53A|152877|family with sequence similarity 53, member A##NM_001174070|FAM53A|152877|family with sequence similarity 53, member A##BT007433|SLBP|7884|stem-loop binding protein##DQ892370|SLBP|7884|stem-loop binding protein##DQ895579|SLBP|7884|stem-loop binding protein##Z71188|SLBP|7884|stem-loop binding protein##NM_006527|SLBP|7884|stem-loop binding protein##U75679|SLBP|7884|stem-loop binding protein##BC014908|SLBP|7884|stem-loop binding protein##BC015703|SLBP|7884|stem-loop binding protein##AK315635|SLBP|7884|stem-loop binding protein##AK300826|SLBP|7884|stem-loop binding protein##AK091735|SLBP|7884|stem-loop binding protein##AK093314|SLBP|7884|stem-loop binding protein##AK303880|TMEM129|92305|transmembrane protein 129	1.222495	CTCF.p2:10:0.760	CTCF.p2:-12:0.463
chr1	37019584	37019685	reg1021551.p1	5.816	+	NM_000760 NM_156039 NM_172313	-70720	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-71150	-	TSC_hg19_v1_chr1_-_36929984 AB049946 AB209905 AK021626 BC031336 AF265439 AK315441 AK302633 NM_031280	-89675	-	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	480141	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	920463	+	TSC_hg19_v1_chr1_+_37940140 AK026884	920516	+	NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AB049946|MRPS15|64960|mitochondrial ribosomal protein S15##AB209905|MRPS15|64960|mitochondrial ribosomal protein S15##AK021626|MRPS15|64960|mitochondrial ribosomal protein S15##BC031336|MRPS15|64960|mitochondrial ribosomal protein S15##AF265439|MRPS15|64960|mitochondrial ribosomal protein S15##AK315441|MRPS15|64960|mitochondrial ribosomal protein S15##AK302633|MRPS15|64960|mitochondrial ribosomal protein S15##NM_031280|MRPS15|64960|mitochondrial ribosomal protein S15##AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.99975	CTCF.p2:-23:1.000
chr2	232270274	232270435	reg1017006.p1	5.816	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	-9932	+	TSC_hg19_v1_chr2_+_232120778 AB055779	-149576	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-206960	+	AK001314 TSC_hg19_v1_chr2_-_232326464	56075	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	58781	-	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	58881	-	AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AY929062|ARMC9|80210|armadillo repeat containing 9##AK001314|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin##BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin	0.740157	CTCF.p2:-29:0.740
chr9	127615185	127615305	reg1001929.p1	5.816	+	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	-75745	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	-81735	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	-194541	+	BC150645 BC171828 BC171830 BC171837 BC127949 TSC_hg19_v1_chr9_+_127615749 NM_001045476	479	+	TSC_hg19_v1_chr9_-_127624226 BC071915 U12465 BC000348 AK291072 BC010919 D28448 NM_007209	8972	-	TSC_hg19_v1_chr9_+_127624397 AK056174	9149	+	AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A##HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##BC150645|WDR38|401551|WD repeat domain 38##BC171828|WDR38|401551|WD repeat domain 38##BC171830|WDR38|401551|WD repeat domain 38##BC171837|WDR38|401551|WD repeat domain 38##BC127949|WDR38|401551|WD repeat domain 38##NM_001045476|WDR38|401551|WD repeat domain 38##BC071915|RPL35|11224|ribosomal protein L35##U12465|RPL35|11224|ribosomal protein L35##BC000348|RPL35|11224|ribosomal protein L35##AK291072|RPL35|11224|ribosomal protein L35##BC010919|RPL35|11224|ribosomal protein L35##D28448|RPL35|11224|ribosomal protein L35##NM_007209|RPL35|11224|ribosomal protein L35##AK056174|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like	0.012296	
chr19	50010068	50010190	reg1002682.p2	5.815	+	TSC_hg19_v1_chr19_+_49999690 X06617 BC016378 BC070224 DQ893225 DQ896555	-10420	+	TSC_hg19_v1_chr19_+_49999686 AK311809 D28407	-10445	+	NM_001015 TSC_hg19_v1_chr19_+_49999653	-10482	+	NM_001136019 BC091487	5448	+	TSC_hg19_v1_chr19_+_50015917 AK075532 BX647163	5765	+	NM_004107 TSC_hg19_v1_chr19_+_50016469 AK074734	6323	+	X06617|RPS11|6205|ribosomal protein S11##BC016378|RPS11|6205|ribosomal protein S11##BC070224|RPS11|6205|ribosomal protein S11##DQ893225|RPS11|6205|ribosomal protein S11##DQ896555|RPS11|6205|ribosomal protein S11##AK311809|RPS11|6205|ribosomal protein S11##NM_001015|RPS11|6205|ribosomal protein S11##NM_001136019|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BC091487|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##AK075532|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BX647163|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##NM_004107|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##AK074734|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha	0.0	
chr19	506819	506943	reg1022738.p1	5.815	+	BC136408 BC137506 BC137507 BC144065 NM_130760 NM_130762 U82483 BC142629 AB590859 AY732484 AY819760 DQ076657 U43628	-10405	+	BC104469 BC104468 AK097378 NM_182577	-31953	-	NM_012435 TSC_hg19_v1_chr19_-_461034	-45865	-	TSC_hg19_v1_chr19_+_507499 AK126170 NM_033513 AK125401 AB463513 BC009520	661	+	TSC_hg19_v1_chr19_+_531720 BC018143 AK291554 BC009850 NM_004359	24830	+	TSC_hg19_v1_chr19_+_531759 L22005 BC023979 AB590273 DQ890738 DQ893910 DQ894652 CU676208 BT006659	24953	+	BC136408|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC137506|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC137507|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC144065|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##NM_130760|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##NM_130762|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##U82483|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC142629|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##AY732484|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##AY819760|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##DQ076657|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##U43628|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC104469|ODF3L2|284451|outer dense fiber of sperm tails 3-like 2##BC104468|ODF3L2|284451|outer dense fiber of sperm tails 3-like 2##AK097378|ODF3L2|284451|outer dense fiber of sperm tails 3-like 2##NM_182577|ODF3L2|284451|outer dense fiber of sperm tails 3-like 2##NM_012435|SHC2|25759|SHC (Src homology 2 domain containing) transforming protein 2##AK126170|TPGS1|91978|tubulin polyglutamylase complex subunit 1##NM_033513|TPGS1|91978|tubulin polyglutamylase complex subunit 1##BC009520|TPGS1|91978|tubulin polyglutamylase complex subunit 1##BC018143|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##AK291554|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##BC009850|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##NM_004359|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##L22005|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##BC023979|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##DQ890738|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##DQ893910|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##DQ894652|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##BT006659|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)	0.728416	CTCF.p2:-8:0.703
chrX	115074580	115074742	reg1017021.p1	5.815	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-246793	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-277619	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-279055	+	BC003645 TSC_hg19_v1_chrX_-_115085443	10778	-	AK313927 NM_000686 X87723 U16957	227334	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	493106	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.385386	CTCF.p2:-15:0.385
chr16	66907174	66907326	reg1021377.p1	5.814	+	AY075020 NM_001014435	-28410	+	AY075019 NM_005182 BC033865 DQ895264 EU176243	-28915	+	TSC_hg19_v1_chr16_-_66864880 U50939 AK307677 AK097680 AK312784 NM_001018159 NM_001018160 NM_003905	-42364	-	TSC_hg19_v1_chr16_+_66914417 AK292539 NM_020786 AB037769 BC028030	7194	+	AF016272 AK225544 AK298255 AK225552 AK298334 AK313101 AK075243 AY358911 NM_001204744 NM_001204745 NM_001204746 NM_004062	45557	-	L24564 BC011645 AK290613 BC057815 NM_001128850 NM_004165	52178	-	AY075020|CA7|766|carbonic anhydrase VII##NM_001014435|CA7|766|carbonic anhydrase VII##AY075019|CA7|766|carbonic anhydrase VII##NM_005182|CA7|766|carbonic anhydrase VII##BC033865|CA7|766|carbonic anhydrase VII##DQ895264|CA7|766|carbonic anhydrase VII##EU176243|CA7|766|carbonic anhydrase VII##U50939|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK307677|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK097680|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK312784|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##NM_001018159|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##NM_001018160|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##NM_003905|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK292539|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##NM_020786|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##AB037769|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##BC028030|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##AF016272|CDH16|1014|cadherin 16, KSP-cadherin##AK225544|CDH16|1014|cadherin 16, KSP-cadherin##AK298255|CDH16|1014|cadherin 16, KSP-cadherin##AK225552|CDH16|1014|cadherin 16, KSP-cadherin##AK298334|CDH16|1014|cadherin 16, KSP-cadherin##AK313101|CDH16|1014|cadherin 16, KSP-cadherin##AK075243|CDH16|1014|cadherin 16, KSP-cadherin##AY358911|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204744|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204745|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204746|CDH16|1014|cadherin 16, KSP-cadherin##NM_004062|CDH16|1014|cadherin 16, KSP-cadherin##L24564|RRAD|6236|Ras-related associated with diabetes##BC011645|RRAD|6236|Ras-related associated with diabetes##AK290613|RRAD|6236|Ras-related associated with diabetes##BC057815|RRAD|6236|Ras-related associated with diabetes##NM_001128850|RRAD|6236|Ras-related associated with diabetes##NM_004165|RRAD|6236|Ras-related associated with diabetes	0.9989	CTCF.p2:-39:0.999
chr17	5608494	5608620	reg1023545.p2	5.814	+	AF298548 TSC_hg19_v1_chr17_-_5487785 AF310105 AB023143 BC028066 BC051787 AK310936 NM_001033053 NM_014922 NM_033004 NM_033006 NM_033007	-120758	-	AF217966 AF131825 NM_001162371 TSC_hg19_v1_chr17_-_5404327	-204241	-	AK289939 AL136906 NM_024039	-218328	+	AK309645 TSC_hg19_v1_chr17_+_5972435 AK289603	363873	+	TSC_hg19_v1_chr17_+_5973700 AL833730 NM_015253	365250	+	TSC_hg19_v1_chr17_+_5974408 BC009975	365860	+	AF298548|NLRP1|22861|NLR family, pyrin domain containing 1##AF310105|NLRP1|22861|NLR family, pyrin domain containing 1##AB023143|NLRP1|22861|NLR family, pyrin domain containing 1##AK310936|NLRP1|22861|NLR family, pyrin domain containing 1##NM_001033053|NLRP1|22861|NLR family, pyrin domain containing 1##NM_014922|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033004|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033006|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033007|NLRP1|22861|NLR family, pyrin domain containing 1##AF217966|LOC728392|728392|uncharacterized LOC728392##AF131825|LOC728392|728392|uncharacterized LOC728392##NM_001162371|LOC728392|728392|uncharacterized LOC728392##AK289939|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AL136906|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##NM_024039|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AK309645|WSCD1|23302|WSC domain containing 1##AK289603|WSCD1|23302|WSC domain containing 1##AL833730|WSCD1|23302|WSC domain containing 1##NM_015253|WSCD1|23302|WSC domain containing 1##BC009975|WSCD1|23302|WSC domain containing 1	0.97016	CTCF.p2:-2:0.970
chr22	36942420	36942518	reg1023873.p2	5.814	+	TSC_hg19_v1_chr22_-_36925270 NM_003753	-17196	-	AK301284 TSC_hg19_v1_chr22_-_36925250	-17235	-	TSC_hg19_v1_chr22_-_36925195 AK303884 BC080515 U54558 BC000328 AK300199 AK312939 BC000469 BC014912 CR456489 BC011740	-17281	-	TSC_hg19_v1_chr22_+_36960326 CU686937	17892	+	AB528094 AF096322 CU012974 CU013262 CU686936 HQ258186 CR456414 BC112297 BC112299 BC069612 NM_006078	156185	-	NM_001177702	221604	-	NM_003753|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##AK301284|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##AK303884|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##BC080515|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##U54558|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##BC000328|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##AK300199|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##AK312939|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##BC000469|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##BC014912|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##CR456489|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##AF096322|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CU012974|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CU013262|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##HQ258186|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CR456414|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC112297|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC112299|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC069612|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##NM_006078|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##NM_001177702|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)	0.138545	
chr6	40296546	40296651	reg1025026.p1	5.814	+	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-394384	-	AB527188 AJ224328 NM_005943	-401213	-	NM_015345 AL833083 BC128388	-535780	+	BC142616 AB033072 NM_020737 AK291474	258546	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	710351	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	713748	+	AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2	0.99759	CTCF.p2:-13:0.998
chr10	123902442	123902591	reg1024493.p1	5.813	+	TSC_hg19_v1_chr10_+_123872541 BC015736	-29995	+	AL833304 TSC_hg19_v1_chr10_+_123754146 AK094848	-148372	+	BC010219 NM_206861 NM_206862 AF528098 AF528099 BC144599 BC144600 BC150627 BC031036	-153784	+	BC039311 TSC_hg19_v1_chr10_+_123923007	20459	+	NM_006997 NM_206860 TSC_hg19_v1_chr10_+_123923144 BC141837 BC142673 AF095791	20715	+	AK058088 NM_144587 BC109261 BC109262	128313	+	BC015736|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AL833304|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AK094848|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC010219|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_206861|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_206862|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AF528098|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AF528099|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC144599|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC144600|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC150627|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC031036|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AK058088|BTBD16|118663|BTB (POZ) domain containing 16##NM_144587|BTBD16|118663|BTB (POZ) domain containing 16##BC109261|BTBD16|118663|BTB (POZ) domain containing 16##BC109262|BTBD16|118663|BTB (POZ) domain containing 16	0.999647	CTCF.p2:-2:1.000
chr2	75295824	75295951	reg1022762.p1	5.813	+	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-110102	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-233636	-	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	-234627	+	AK289765 NM_001058 NM_015727	130741	-	BC016157 TSC_hg19_v1_chr2_-_75788066	492160	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	492203	-	NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2##AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A	0.064424	
chr3	166750200	166750323	reg1025465.p1	5.813	+	NM_000055 TSC_hg19_v1_chr3_-_165555283	-1194994	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	-1195068	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	-1835756	-	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	347816	-	AK226025 AB006423 NM_006217 AK293391	441559	-	BC035512 NM_178824	621027	-	NM_000055|BCHE|590|butyrylcholinesterase##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing##AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##BC035512|WDR49|151790|WD repeat domain 49##NM_178824|WDR49|151790|WD repeat domain 49	0.455805	CTCF.p2:0:0.456
chr3	46746789	46746970	reg1000850.p2	5.813	+	AY081842 NM_147196 BC126258 BC126260	-4039	+	TSC_hg19_v1_chr3_-_46735168 AK131270 NM_001190707 CR627258 AL832203 AB107015 AL832132 NM_147129	-11690	-	AK092455 AX747555 NM_182775 AK126505	-27958	-	EU176497 TSC_hg19_v1_chr3_-_46759380 BC037775 BC033016 AF100707 NM_013270	12469	-	AK097666 NM_001205271	31040	-	BC133695 NM_199183	39365	-	AY081842|TMIE|259236|transmembrane inner ear##NM_147196|TMIE|259236|transmembrane inner ear##BC126258|TMIE|259236|transmembrane inner ear##BC126260|TMIE|259236|transmembrane inner ear##AK131270|ALS2CL|259173|ALS2 C-terminal like##NM_001190707|ALS2CL|259173|ALS2 C-terminal like##CR627258|ALS2CL|259173|ALS2 C-terminal like##AL832203|ALS2CL|259173|ALS2 C-terminal like##AB107015|ALS2CL|259173|ALS2 C-terminal like##AL832132|ALS2CL|259173|ALS2 C-terminal like##NM_147129|ALS2CL|259173|ALS2 C-terminal like##AK092455|ALS2CL|259173|ALS2 C-terminal like##NM_182775|ALS2CL|259173|ALS2 C-terminal like##AK126505|ALS2CL|259173|ALS2 C-terminal like##EU176497|PRSS50|29122|protease, serine, 50##BC037775|PRSS50|29122|protease, serine, 50##BC033016|PRSS50|29122|protease, serine, 50##AF100707|PRSS50|29122|protease, serine, 50##NM_013270|PRSS50|29122|protease, serine, 50##NM_001205271|PRSS46|100287362|protease, serine, 46##BC133695|PRSS45|377047|protease, serine, 45##NM_199183|PRSS45|377047|protease, serine, 45	0.0	
chr5	109024445	109024562	reg1022176.p2	5.813	+	BC030826 AB007898 TSC_hg19_v1_chr5_-_108745619 AK291759 NM_014819	-278882	-	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	-939831	+	AK293376 J03358 NM_005246 AK296874	-940941	+	TSC_hg19_v1_chr5_+_109025072 BC031659	561	+	TSC_hg19_v1_chr5_+_109025096 BC111062	594	+	TSC_hg19_v1_chr5_+_109025138 NM_002372	642	+	BC030826|PJA2|9867|praja ring finger 2##AB007898|PJA2|9867|praja ring finger 2##AK291759|PJA2|9867|praja ring finger 2##NM_014819|PJA2|9867|praja ring finger 2##AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1	0.991533	CTCF.p2:-27:0.992
chr6	34211777	34211874	reg1023105.p2	5.813	+	BC015789 NM_145905	-5258	+	TSC_hg19_v1_chr6_+_34205395 M23619	-6430	+	TSC_hg19_v1_chr6_+_34205029 AF176039	-6772	+	AK311680 TSC_hg19_v1_chr6_+_34216344	4525	+	BC047919 TSC_hg19_v1_chr6_-_34216784 BC023627 AK290164	4968	-	TSC_hg19_v1_chr6_-_34216832 BC009526 NM_001008703 NM_001008704 NM_178508	5038	-	BC015789|HMGA1|3159|high mobility group AT-hook 1##NM_145905|HMGA1|3159|high mobility group AT-hook 1##M23619|HMGA1|3159|high mobility group AT-hook 1##AF176039|HMGA1|3159|high mobility group AT-hook 1##BC047919|C6orf1|221491|chromosome 6 open reading frame 1##BC023627|C6orf1|221491|chromosome 6 open reading frame 1##AK290164|C6orf1|221491|chromosome 6 open reading frame 1##BC009526|C6orf1|221491|chromosome 6 open reading frame 1##NM_001008703|C6orf1|221491|chromosome 6 open reading frame 1##NM_001008704|C6orf1|221491|chromosome 6 open reading frame 1##NM_178508|C6orf1|221491|chromosome 6 open reading frame 1	0.036314	
chr16	66391481	66391629	reg1025146.p1	5.812	+	TSC_hg19_v1_chr16_-_65155987 AK297377	-1235561	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	-1235587	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	-1235653	-	NM_001795 TSC_hg19_v1_chr16_+_66400538	8978	+	TSC_hg19_v1_chr16_+_66400559 U84722	9005	+	AK300461 TSC_hg19_v1_chr16_+_66400593 X59796 AK300299 AB209908 AB035304 BC096363 BC096364 BC096365 BC117520	9047	+	AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	0.997281	CTCF.p2:20:0.997
chr12	92785646	92785775	reg1023714.p2	5.811	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-246067	-	NM_001920	-1208905	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-1209130	-	AJ845165 AJ845166 NM_001025233	32024	+	AJ845168 NM_001025232	36213	-	NM_001037671 NM_001178097	310908	+	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74	0.080576	
chr1	34078608	34078713	reg1024815.p1	5.811	+	NM_145238 AK131405 TSC_hg19_v1_chr1_+_33938251 AK290195 BC008827 BC011404	-140409	+	TSC_hg19_v1_chr1_-_33896604 AJ242730	-182052	-	AB527842 AJ419231 BC130630 BC144121 NM_198040	-237493	-	AK097707 NM_145205	247415	+	TSC_hg19_v1_chr1_-_34630856 AB212622	552205	-	AY210418 NM_052896	552782	-	NM_145238|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK131405|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK290195|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC008827|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC011404|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AJ242730|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AJ419231|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC130630|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC144121|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##NM_198040|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AK097707|HMGB4|127540|high mobility group box 4##NM_145205|HMGB4|127540|high mobility group box 4##AB212622|CSMD2|114784|CUB and Sushi multiple domains 2##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2	0.991418	CTCF.p2:6:0.991
chr1	8299091	8299211	reg1025227.p2	5.810	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-212753	-	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	-212790	-	AB528431 AJ276373 DQ892137 DQ895331 BC012839 TSC_hg19_v1_chr1_-_8075752	-223436	-	NM_001080397	85238	+	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	184866	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	578441	-	NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AJ276373|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ892137|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ895331|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC012839|ERRFI1|54206|ERBB receptor feedback inhibitor 1##NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats	0.017916	
chr1	168421723	168421852	reg1024724.p1	5.809	+	AJ010277 NM_005149 BC093664 BC093666 EU446671	-171485	+	TSC_hg19_v1_chr1_+_168195262 BC068098 CU686619	-226494	+	TSC_hg19_v1_chr1_+_168195254 AK290325 NM_199344	-226536	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	91430	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	124005	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	276642	-	AJ010277|TBX19|9095|T-box 19##NM_005149|TBX19|9095|T-box 19##BC093664|TBX19|9095|T-box 19##BC093666|TBX19|9095|T-box 19##EU446671|TBX19|9095|T-box 19##BC068098|SFT2D2|375035|SFT2 domain containing 2##AK290325|SFT2D2|375035|SFT2 domain containing 2##NM_199344|SFT2D2|375035|SFT2 domain containing 2##BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin	0.012754	
chr13	42979923	42980100	reg1023440.p1	5.809	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	-133726	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	-267801	+	NM_152910 NM_178009 AB078967 AB078968	-357146	+	BC040889 NM_033012	156860	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	168323	+	NM_182508 AK310859 AK098238 BC093659 BC112237	375713	+	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30	0.044823	
chr14	39960376	39960538	reg1024840.p1	5.809	+	BC053537 BC068566 BC030611 NM_203301	-58796	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-59100	-	TSC_hg19_v1_chr14_+_39736592 BC039017 AK315254 BC029513 BC051363 U73682	-223884	+	NM_152447 AK096627	2116310	+	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	5016018	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	5406041	+	BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##BC039017|CTAGE5|4253|CTAGE family, member 5##AK315254|CTAGE5|4253|CTAGE family, member 5##BC029513|CTAGE5|4253|CTAGE family, member 5##BC051363|CTAGE5|4253|CTAGE family, member 5##U73682|CTAGE5|4253|CTAGE family, member 5##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28	0.996021	CTCF.p2:-32:0.996
chr17	11547721	11547830	reg1024789.p1	5.809	+	AJ404468 NM_001372 AF257737 AK055990 AK310137	-46008	+	AK094349 TSC_hg19_v1_chr17_+_11465221 BC105704 BC105705 BC105707 BC105706	-82579	+	NM_001173461 NM_001173462 NM_207386	-403036	+	NM_004662 X99947	238445	+	AK092656 AX747657 NM_144680 TSC_hg19_v1_chr17_-_11900782 AY491053 AK127908	352978	-	TSC_hg19_v1_chr17_+_11924150 BC036032 NM_003010 BC060764 AK131544 AK313053 U17743 AK294923 L36870 BC050386 AB590846 BT019676 CR536564	376406	+	AJ404468|DNAH9|1770|dynein, axonemal, heavy chain 9##NM_001372|DNAH9|1770|dynein, axonemal, heavy chain 9##AF257737|DNAH9|1770|dynein, axonemal, heavy chain 9##AK055990|DNAH9|1770|dynein, axonemal, heavy chain 9##AK310137|DNAH9|1770|dynein, axonemal, heavy chain 9##AK094349|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105704|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105705|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105707|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105706|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_001173461|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_001173462|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_207386|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_004662|DNAH9|1770|dynein, axonemal, heavy chain 9##X99947|DNAH9|1770|dynein, axonemal, heavy chain 9##AK092656|ZNF18|7566|zinc finger protein 18##NM_144680|ZNF18|7566|zinc finger protein 18##AY491053|ZNF18|7566|zinc finger protein 18##AK127908|ZNF18|7566|zinc finger protein 18##BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4##NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4##U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4##L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4##CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4	0.96603	CTCF.p2:5:0.966
chr4	173123743	173123877	reg1024899.p1	5.809	+	NM_001034845 BC047551 BC144036 BC144037 BC063015	-389166	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-2112396	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-2112612	-	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	966142	+	BC043556 TSC_hg19_v1_chr4_-_174090314	966500	-	BC040577 TSC_hg19_v1_chr4_-_174090813	966997	-	NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.955418	CTCF.p2:2:0.955
chr6	112331700	112331814	reg1024289.p2	5.809	+	TSC_hg19_v1_chr6_-_112194648 NM_002037	-137102	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	-137222	-	BC032496 NM_153048	-251449	-	BC012028 NM_003880 BC035250 NM_198239 BC105940 BC105941 AY358349 AF100781 AY358350 AB075040	43660	+	AF201334 CU689114 CU692994 DQ891503 DQ894695 BC025405 TSC_hg19_v1_chr6_-_112408705 BC031101 AK026242 NM_016262	76948	-	NM_001033564 TSC_hg19_v1_chr6_+_112408818 BC044912 AL049461	77024	+	NM_002037|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3##AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF201334|TUBE1|51175|tubulin, epsilon 1##DQ891503|TUBE1|51175|tubulin, epsilon 1##DQ894695|TUBE1|51175|tubulin, epsilon 1##BC025405|TUBE1|51175|tubulin, epsilon 1##BC031101|TUBE1|51175|tubulin, epsilon 1##AK026242|TUBE1|51175|tubulin, epsilon 1##NM_016262|TUBE1|51175|tubulin, epsilon 1##NM_001033564|C6orf225|619208|chromosome 6 open reading frame 225##BC044912|C6orf225|619208|chromosome 6 open reading frame 225##AL049461|C6orf225|619208|chromosome 6 open reading frame 225	0.993504	CTCF.p2:-15:0.994
chr16	74363405	74363519	reg1022010.p2	5.808	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	-32691	+	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	-32769	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-1270876	-	TSC_hg19_v1_chr16_-_74401811 AK124154	38350	-	TSC_hg19_v1_chr16_-_74402059 BC037579 AK096768	38636	-	AK074773 AY358373 AK293982 NM_001011880 AL833339 AF448856	91878	-	D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##BC037579|LOC283922|283922|pyruvate dehydrogenase phosphatase regulatory subunit pseudogene##AK096768|LOC283922|283922|pyruvate dehydrogenase phosphatase regulatory subunit pseudogene##AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##AY358373|CLEC18B|497190|C-type lectin domain family 18, member B##AK293982|CLEC18B|497190|C-type lectin domain family 18, member B##NM_001011880|CLEC18B|497190|C-type lectin domain family 18, member B##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AF448856|CLEC18C|283971|C-type lectin domain family 18, member C	0.997986	CTCF.p2:20:0.998
chr4	146137830	146137962	reg1022004.p2	5.808	+	AK302581 NM_001102653	-37084	-	BC118572 BC118653 NM_017493	-42003	-	TSC_hg19_v1_chr4_+_146031528 X74987	-106346	+	TSC_hg19_v1_chr4_+_146403004 U59423 NM_005900 BC001878	264986	+	U59912 NM_001003688 U54826 AK293055	266062	+	TSC_hg19_v1_chr4_+_146540536 AK126662 NM_172250	402650	+	AK302581|OTUD4|54726|OTU domain containing 4##NM_001102653|OTUD4|54726|OTU domain containing 4##BC118572|OTUD4|54726|OTU domain containing 4##BC118653|OTUD4|54726|OTU domain containing 4##NM_017493|OTUD4|54726|OTU domain containing 4##X74987|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##U59423|SMAD1|4086|SMAD family member 1##NM_005900|SMAD1|4086|SMAD family member 1##BC001878|SMAD1|4086|SMAD family member 1##U59912|SMAD1|4086|SMAD family member 1##NM_001003688|SMAD1|4086|SMAD family member 1##U54826|SMAD1|4086|SMAD family member 1##AK293055|SMAD1|4086|SMAD family member 1##AK126662|MMAA|166785|methylmalonic aciduria (cobalamin deficiency) cblA type##NM_172250|MMAA|166785|methylmalonic aciduria (cobalamin deficiency) cblA type	0.160223	
chr6	105219233	105219363	reg1024582.p1	5.808	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	-3372393	+	BC037954 TSC_hg19_v1_chr6_+_101846686	-3372621	+	HM149340 TSC_hg19_v1_chr6_+_101841583	-3377792	+	TSC_hg19_v1_chr6_-_105307736 AK291760	88427	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	88464	-	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	88490	-	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	0.647339	CTCF.p2:44:0.647
chr6_apd_hap1	2879610	2879720	reg1024895.p1	5.808	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.586768	CTCF.p2:7:0.587
chrX	130902322	130902441	reg1019859.p1	5.808	+	BC137050 AB529233 NM_001004486	-224383	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-478969	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-479119	-	TSC_hg19_v1_chrX_-_130964633 AK097911	62270	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	254940	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	255259	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.073409	
chr1	27165275	27165455	reg1018363.p1	5.807	+	TSC_hg19_v1_chr1_+_27153178 BC066776 NM_032283	-12168	+	AK000484 AK225521 AK301626 NM_001202554 AK056539	-50684	+	TSC_hg19_v1_chr1_+_27114455 NM_017837 BC013568	-50909	+	BC023552 AF029082 NM_006142 TSC_hg19_v1_chr1_+_27189639 BC001550 BC000329 BC002995 BC000995 AB464718 M93010 DQ894162 CU674492 CR541905 CR541926	24300	+	CU675813 AY364261 TSC_hg19_v1_chr1_-_27216757 BC007815 BC008634 BC020272	51310	-	TSC_hg19_v1_chr1_-_27216775 AK022535 AY358864	51407	-	BC066776|ZDHHC18|84243|zinc finger, DHHC-type containing 18##NM_032283|ZDHHC18|84243|zinc finger, DHHC-type containing 18##AK000484|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK225521|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK301626|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_001202554|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK056539|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_017837|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##BC013568|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##BC023552|SFN|2810|stratifin##AF029082|SFN|2810|stratifin##NM_006142|SFN|2810|stratifin##BC001550|SFN|2810|stratifin##BC000329|SFN|2810|stratifin##BC002995|SFN|2810|stratifin##BC000995|SFN|2810|stratifin##M93010|SFN|2810|stratifin##DQ894162|SFN|2810|stratifin##CR541905|SFN|2810|stratifin##CR541926|SFN|2810|stratifin##AY364261|GPN2|54707|GPN-loop GTPase 2##BC007815|GPN2|54707|GPN-loop GTPase 2##BC008634|GPN2|54707|GPN-loop GTPase 2##BC020272|GPN2|54707|GPN-loop GTPase 2##AK022535|GPN2|54707|GPN-loop GTPase 2##AY358864|GPN2|54707|GPN-loop GTPase 2	0.127944	
chr17	80873001	80873097	reg1019575.p2	5.807	+	BC109036 BC109037 AK301690 AK023903 NM_024702	-75140	-	TSC_hg19_v1_chr17_+_80710051 AJ006417 DQ891885 EU176650	-163001	+	TSC_hg19_v1_chr17_+_80710000 AK091959 AX747278	-163041	+	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	133421	-	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	136620	-	TSC_hg19_v1_chr17_+_81037508 BC082252 NM_001004431 BC118558 BC118638	164493	+	BC109036|ZNF750|79755|zinc finger protein 750##BC109037|ZNF750|79755|zinc finger protein 750##AK301690|ZNF750|79755|zinc finger protein 750##AK023903|ZNF750|79755|zinc finger protein 750##NM_024702|ZNF750|79755|zinc finger protein 750##AJ006417|TBCD|6904|tubulin folding cofactor D##DQ891885|TBCD|6904|tubulin folding cofactor D##EU176650|TBCD|6904|tubulin folding cofactor D##AK091959|TBCD|6904|tubulin folding cofactor D##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like##NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like	0.750187	CTCF.p2:5:0.750
chr20	62495485	62495666	reg1006019.p1	5.807	+	NM_080622	-3010	+	TSC_hg19_v1_chr20_-_62462618 BC052269 BC073800	-32978	-	AK131482 NM_025224	-58720	-	NM_001243891 NM_001243892 NM_001243894 NM_001243895 NM_003288 NM_199359 NM_199360 NM_199361 NM_199362 NM_199363 TSC_hg19_v1_chr20_+_62496622 AK298366 AK055068 AK297064 AK314501	1028	+	TSC_hg19_v1_chr20_+_62496638 AF004430	1065	+	TSC_hg19_v1_chr20_+_62496650 AK223031	1086	+	NM_080622|ABHD16B|140701|abhydrolase domain containing 16B##BC052269|ZBTB46|140685|zinc finger and BTB domain containing 46##BC073800|ZBTB46|140685|zinc finger and BTB domain containing 46##AK131482|ZBTB46|140685|zinc finger and BTB domain containing 46##NM_025224|ZBTB46|140685|zinc finger and BTB domain containing 46##NM_001243891|TPD52L2|7165|tumor protein D52-like 2##NM_001243892|TPD52L2|7165|tumor protein D52-like 2##NM_001243894|TPD52L2|7165|tumor protein D52-like 2##NM_001243895|TPD52L2|7165|tumor protein D52-like 2##NM_003288|TPD52L2|7165|tumor protein D52-like 2##NM_199359|TPD52L2|7165|tumor protein D52-like 2##NM_199360|TPD52L2|7165|tumor protein D52-like 2##NM_199361|TPD52L2|7165|tumor protein D52-like 2##NM_199362|TPD52L2|7165|tumor protein D52-like 2##NM_199363|TPD52L2|7165|tumor protein D52-like 2##AK298366|TPD52L2|7165|tumor protein D52-like 2##AK055068|TPD52L2|7165|tumor protein D52-like 2##AK297064|TPD52L2|7165|tumor protein D52-like 2##AK314501|TPD52L2|7165|tumor protein D52-like 2##AF004430|TPD52L2|7165|tumor protein D52-like 2##AK223031|TPD52L2|7165|tumor protein D52-like 2	0.0	
chr12	102224783	102224916	reg1018623.p1	5.806	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	-263	-	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	-91630	-	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	-133227	+	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	46269	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	46609	+	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	230901	-	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1##CR457171|CCDC53|51019|coiled-coil domain containing 53	0.993871	CTCF.p2:-84:0.994
chr18	76635635	76635733	reg1023037.p2	5.806	+	BC016792 TSC_hg19_v1_chr18_-_75705702	-929992	-	TSC_hg19_v1_chr18_+_74961925 NM_001480	-1673718	+	TSC_hg19_v1_chr18_-_74844774 NM_001025100 NM_001025101	-1790905	-	BC129827 BC148296 NM_171999	104590	+	BC036473 TSC_hg19_v1_chr18_+_76829395 AK308291 BC022535 BC125219 BC125220 NM_198531 AK093704 AX748269 AK295981	193715	+	TSC_hg19_v1_chr18_+_76829420 BC053561	193765	+	NM_001480|GALR1|2587|galanin receptor 1##NM_001025100|MBP|4155|myelin basic protein##NM_001025101|MBP|4155|myelin basic protein##BC148296|SALL3|27164|sal-like 3 (Drosophila)##NM_171999|SALL3|27164|sal-like 3 (Drosophila)##BC036473|ATP9B|374868|ATPase, class II, type 9B##AK308291|ATP9B|374868|ATPase, class II, type 9B##BC022535|ATP9B|374868|ATPase, class II, type 9B##BC125219|ATP9B|374868|ATPase, class II, type 9B##BC125220|ATP9B|374868|ATPase, class II, type 9B##NM_198531|ATP9B|374868|ATPase, class II, type 9B##AK093704|ATP9B|374868|ATPase, class II, type 9B##AK295981|ATP9B|374868|ATPase, class II, type 9B##BC053561|ATP9B|374868|ATPase, class II, type 9B	0.687689	CTCF.p2:7:0.688
chr21	48081197	48081342	reg1023079.p1	5.806	+	TSC_hg19_v1_chr21_+_48055589 BC100026	-25655	+	AK223157 TSC_hg19_v1_chr21_+_48055585 BC000727	-25683	+	NM_001242864 NM_001242865 NM_001242866 NM_001535 NM_206962 TSC_hg19_v1_chr21_+_48055572 AK123352 AY786414 FJ436410 FJ436411 FJ436412 U79286 X99209 U80213 AK312573 AL833586	-25726	+	None	None	None	None	None	None	None	None	None	BC100026|PRMT2|3275|protein arginine methyltransferase 2##AK223157|PRMT2|3275|protein arginine methyltransferase 2##BC000727|PRMT2|3275|protein arginine methyltransferase 2##NM_001242864|PRMT2|3275|protein arginine methyltransferase 2##NM_001242865|PRMT2|3275|protein arginine methyltransferase 2##NM_001242866|PRMT2|3275|protein arginine methyltransferase 2##NM_001535|PRMT2|3275|protein arginine methyltransferase 2##NM_206962|PRMT2|3275|protein arginine methyltransferase 2##AK123352|PRMT2|3275|protein arginine methyltransferase 2##AY786414|PRMT2|3275|protein arginine methyltransferase 2##FJ436410|PRMT2|3275|protein arginine methyltransferase 2##FJ436411|PRMT2|3275|protein arginine methyltransferase 2##FJ436412|PRMT2|3275|protein arginine methyltransferase 2##U79286|PRMT2|3275|protein arginine methyltransferase 2##X99209|PRMT2|3275|protein arginine methyltransferase 2##U80213|PRMT2|3275|protein arginine methyltransferase 2##AK312573|PRMT2|3275|protein arginine methyltransferase 2##AL833586|PRMT2|3275|protein arginine methyltransferase 2	0.031893	
chr7	139303737	139303862	reg1026905.p1	5.806	+	NM_001080511	-95126	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-135367	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-258785	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	174106	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	174240	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	225293	+	NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.984858	CTCF.p2:7:0.985
chr9	68704718	68704855	reg1026705.p1	5.806	+	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	-777970	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-2151511	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-2210590	-	TSC_hg19_v1_chr9_+_68726468 AK311167	21716	+	TSC_hg19_v1_chr9_+_69065493 AK311167	360752	+	NM_001085476	497417	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6	0.0	
chrX	146885647	146885768	reg1024303.p2	5.806	+	NM_001144064 NM_001244892	-989459	-	NM_001144064 NM_001244892	-994406	+	NM_004709 Y08902 BC113600 BC113604 HQ258719	-1976646	+	TSC_hg19_v1_chrX_+_146993468 BC086957 NM_001185075 NM_001185076 NM_001185081 NM_001185082 NM_002024 S65791 X69962 M67468	107786	+	BC038998 TSC_hg19_v1_chrX_+_146993559	107844	+	TSC_hg19_v1_chrX_+_146993685 CU691632	107986	+	NM_001144064|CXorf51A|100129239|chromosome X open reading frame 51A##NM_001244892|CXorf51B|100133053|chromosome X open reading frame 51B##NM_001144064|CXorf51A|100129239|chromosome X open reading frame 51A##NM_001244892|CXorf51B|100133053|chromosome X open reading frame 51B##NM_004709|CXorf1|9142|chromosome X open reading frame 1##Y08902|CXorf1|9142|chromosome X open reading frame 1##BC113600|CXorf1|9142|chromosome X open reading frame 1##BC113604|CXorf1|9142|chromosome X open reading frame 1##HQ258719|CXorf1|9142|chromosome X open reading frame 1##BC086957|FMR1|2332|fragile X mental retardation 1##NM_001185075|FMR1|2332|fragile X mental retardation 1##NM_001185076|FMR1|2332|fragile X mental retardation 1##NM_001185081|FMR1|2332|fragile X mental retardation 1##NM_001185082|FMR1|2332|fragile X mental retardation 1##NM_002024|FMR1|2332|fragile X mental retardation 1##S65791|FMR1|2332|fragile X mental retardation 1##X69962|FMR1|2332|fragile X mental retardation 1##M67468|FMR1|2332|fragile X mental retardation 1##BC038998|FMR1|2332|fragile X mental retardation 1	0.056761	
chr1	157140662	157140768	reg1025359.p2	5.805	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-32432	-	TSC_hg19_v1_chr1_-_157108158 L16464	-32565	-	AK131392 NM_001004341	-71116	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	381515	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	427086	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	529812	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.974225	CTCF.p2:-10:0.974
chr12	108492995	108493119	reg1023632.p1	5.805	+	AY238895 NM_203436	-324896	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-338056	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	-338147	-	BC110330 AB018332 NM_014653	30430	+	NM_001142345	221381	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	240027	-	AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1	0.108632	
chr17	31975127	31975242	reg1024973.p2	5.805	+	AL834182 NM_183377	-355179	-	AF216311 NM_173847 BC100886 BC100887	-656282	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-719981	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	508503	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	607147	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	622089	+	AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7	0.945617	CTCF.p2:9:0.946
chr2	205124958	205125066	reg1024903.p1	5.805	+	AK314985 AJ277832 NM_012092 BC028006 BC028210 AB023135 AF218312 CU688368 CU688430	-323518	+	BC070162 AF414120 NM_001037631 NM_005214 AK313732 BC069566 BC074893 BC074842 AB590653 AF486806 AY209009 AY792514 AY999702 DQ785106 L15006	-392425	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	-553613	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	285478	+	TSC_hg19_v1_chr2_+_205410560 AX765687 AX765741 AK056157	285582	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	285707	+	AK314985|ICOS|29851|inducible T-cell co-stimulator##AJ277832|ICOS|29851|inducible T-cell co-stimulator##NM_012092|ICOS|29851|inducible T-cell co-stimulator##BC028006|ICOS|29851|inducible T-cell co-stimulator##BC028210|ICOS|29851|inducible T-cell co-stimulator##AB023135|ICOS|29851|inducible T-cell co-stimulator##BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK056157|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)	0.964492	CTCF.p2:-4:0.964
chr3	124884161	124884245	reg1023080.p1	5.805	+	BC063528 TSC_hg19_v1_chr3_-_124842461	-41748	-	AB384586 NM_020733 TSC_hg19_v1_chr3_-_124774842	-109403	-	BC067235 TSC_hg19_v1_chr3_-_124732404	-151811	-	AF345197 HQ258349 BC126158 BC126160 AF390442 NM_001195483	46014	-	AK123001 TSC_hg19_v1_chr3_-_124931591 AX721165 AK131070 NM_024628	47382	-	AF039019 AL833616 AF432210 AJ236885 L04282 BC035591 BC018971 AK314203 TSC_hg19_v1_chr3_-_125094153 BC050260 NM_021964	209897	-	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)##BC067235|HEG1|57493|HEG homolog 1 (zebrafish)##AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AK123001|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_024628|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF039019|ZNF148|7707|zinc finger protein 148##AL833616|ZNF148|7707|zinc finger protein 148##AF432210|ZNF148|7707|zinc finger protein 148##AJ236885|ZNF148|7707|zinc finger protein 148##L04282|ZNF148|7707|zinc finger protein 148##BC035591|ZNF148|7707|zinc finger protein 148##BC018971|ZNF148|7707|zinc finger protein 148##AK314203|ZNF148|7707|zinc finger protein 148##BC050260|ZNF148|7707|zinc finger protein 148##NM_021964|ZNF148|7707|zinc finger protein 148	0.0	
chr5	145945471	145945578	reg1022309.p1	5.805	+	AB463658 AY351676 NM_194251 AK122627	-49811	-	TSC_hg19_v1_chr5_+_145826895 NM_001040006 NM_006706 AK304319 BC006109 BC014151 BC062351 AK126455 BC111727 AB209910 AB464301 AF017789	-118630	+	BC104923 BC112207 NM_002700 AB464668 EU446649 HQ258176	-226894	+	CU689232 DQ891785 DQ894969 TSC_hg19_v1_chr5_-_146257712	312150	-	AK314810 M64930 NM_004576 AK056192 NM_181675 AK289717 BX647887 NM_001127381	312775	-	BC031790 NM_181674 NM_181676	490120	-	AY351676|GPR151|134391|G protein-coupled receptor 151##NM_194251|GPR151|134391|G protein-coupled receptor 151##NM_001040006|TCERG1|10915|transcription elongation regulator 1##NM_006706|TCERG1|10915|transcription elongation regulator 1##AK304319|TCERG1|10915|transcription elongation regulator 1##BC006109|TCERG1|10915|transcription elongation regulator 1##BC014151|TCERG1|10915|transcription elongation regulator 1##BC062351|TCERG1|10915|transcription elongation regulator 1##AK126455|TCERG1|10915|transcription elongation regulator 1##BC111727|TCERG1|10915|transcription elongation regulator 1##AB209910|TCERG1|10915|transcription elongation regulator 1##AF017789|TCERG1|10915|transcription elongation regulator 1##BC104923|POU4F3|5459|POU class 4 homeobox 3##BC112207|POU4F3|5459|POU class 4 homeobox 3##NM_002700|POU4F3|5459|POU class 4 homeobox 3##EU446649|POU4F3|5459|POU class 4 homeobox 3##HQ258176|POU4F3|5459|POU class 4 homeobox 3##DQ891785|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##DQ894969|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK314810|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##M64930|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_004576|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK056192|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181675|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK289717|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BX647887|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_001127381|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta	0.983055	CTCF.p2:-21:0.983
chr12	15304586	15304685	reg1017841.p1	5.804	+	NM_006205 DQ980604 D45399	-178669	+	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	-190087	-	CU688844 BC030218 AY358536 NM_152321 AK056677	-213174	-	AK311016 BC007997 AK295343 AK313881 NM_001190726 NM_032918	69715	-	NM_002848 NM_030667 TSC_hg19_v1_chr12_+_15475264 AB209729	170625	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	170916	+	NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##BC030218|ERP27|121506|endoplasmic reticulum protein 27##AY358536|ERP27|121506|endoplasmic reticulum protein 27##NM_152321|ERP27|121506|endoplasmic reticulum protein 27##AK056677|ERP27|121506|endoplasmic reticulum protein 27##AK311016|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##BC007997|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK295343|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK313881|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_001190726|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_032918|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AB209729|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	0.999312	CTCF.p2:-14:0.999
chr15	69217351	69217472	reg1025817.p1	5.804	+	TSC_hg19_v1_chr15_-_69113264 NM_006305	-104151	-	TSC_hg19_v1_chr15_-_69113235 BC007200 BC000608 AF025684 AK312703	-104184	-	AB463390 AY349171 BC106719 BC125143 BT007436 DQ893294 DQ896729 U60823 TSC_hg19_v1_chr15_-_69113208 U73477 X75090 AK223280	-104262	-	NM_001184780 NM_145658 AY358983 AF325189 AF325190 BC017998 AF275321 BC125097 BC125098 CU676134	5504	+	NM_001184779 NM_024505 AF353088 AF353089 AK314689 AK074071	89640	+	TSC_hg19_v1_chr15_+_69452935 BC142975 AY635582 NM_015554 AK098595 BC033828 BC019011	235487	+	NM_006305|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC007200|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC000608|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AF025684|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK312703|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AY349171|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC106719|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC125143|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BT007436|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ893294|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ896729|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U60823|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U73477|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##X75090|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK223280|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##NM_001184780|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_145658|SPESP1|246777|sperm equatorial segment protein 1##AY358983|SPESP1|246777|sperm equatorial segment protein 1##AF325189|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF325190|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC017998|SPESP1|246777|sperm equatorial segment protein 1##AF275321|SPESP1|246777|sperm equatorial segment protein 1##BC125097|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC125098|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AY635582|GLCE|26035|glucuronic acid epimerase##NM_015554|GLCE|26035|glucuronic acid epimerase	0.906674	CTCF.p2:-5:0.907
chr19	41827760	41827909	reg1026122.p2	5.804	+	TSC_hg19_v1_chr19_+_41816132 BC011577 NM_052848	-11750	+	BC129981 TSC_hg19_v1_chr19_-_41813133	-14772	-	TSC_hg19_v1_chr19_+_41798338 AL050146	-29562	+	BT007245 CU692504 TSC_hg19_v1_chr19_-_41858962 EU832132 EU832225	31155	-	TSC_hg19_v1_chr19_-_41859306 BC022242 AK291907	31455	-	TSC_hg19_v1_chr19_-_41859420 BC000125 BC001180	31564	-	BC011577|CCDC97|90324|coiled-coil domain containing 97##NM_052848|CCDC97|90324|coiled-coil domain containing 97##AL050146|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##BT007245|TGFB1|7040|transforming growth factor, beta 1##EU832132|TGFB1|7040|transforming growth factor, beta 1##EU832225|TGFB1|7040|transforming growth factor, beta 1##BC022242|TGFB1|7040|transforming growth factor, beta 1##AK291907|TGFB1|7040|transforming growth factor, beta 1##BC000125|TGFB1|7040|transforming growth factor, beta 1##BC001180|TGFB1|7040|transforming growth factor, beta 1	0.965252	CTCF.p2:12:0.965
chr2	198120397	198120572	reg1025292.p1	5.804	+	AB128038 AB527353 TSC_hg19_v1_chr2_-_197791382 BX648642 AK022439 NM_024989 BC040517	-329040	-	BC137150 BC137151 AY358249 NM_213608	-445547	-	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	-456071	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	54898	-	TSC_hg19_v1_chr2_-_198175459 BC063622	54989	-	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	55035	-	AB128038|PGAP1|80055|post-GPI attachment to proteins 1##BX648642|PGAP1|80055|post-GPI attachment to proteins 1##AK022439|PGAP1|80055|post-GPI attachment to proteins 1##NM_024989|PGAP1|80055|post-GPI attachment to proteins 1##BC040517|PGAP1|80055|post-GPI attachment to proteins 1##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK124039|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44	0.0	
chr5	1599270	1599373	reg1020564.p2	5.804	+	TSC_hg19_v1_chr5_-_1594617 BC150558	-4690	-	TSC_hg19_v1_chr5_-_1524086 NM_024830	-75259	-	TSC_hg19_v1_chr5_-_1523908 AB244719 AB463849	-75387	-	TSC_hg19_v1_chr5_-_1634097 BC020552 BC053586 BC044220 AK308990 AK315872 BC067863 BC014604 AK307076	34748	-	TSC_hg19_v1_chr5_-_1634100 BC019918 BC045555 AK311210 AK311251	34797	-	TSC_hg19_v1_chr5_-_1799926 AB049654 AF151109 AF155653 BC020642	200602	-	BC150558|SDHAP3|728609|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3##NM_024830|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AB244719|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##BC020552|LOC728613|728613|programmed cell death 6 pseudogene##BC053586|LOC728613|728613|programmed cell death 6 pseudogene##BC044220|LOC728613|728613|programmed cell death 6 pseudogene##AK308990|LOC728613|728613|programmed cell death 6 pseudogene##BC067863|LOC728613|728613|programmed cell death 6 pseudogene##BC014604|LOC728613|728613|programmed cell death 6 pseudogene##AK307076|LOC728613|728613|programmed cell death 6 pseudogene##BC019918|LOC728613|728613|programmed cell death 6 pseudogene##BC045555|LOC728613|728613|programmed cell death 6 pseudogene##AK311210|LOC728613|728613|programmed cell death 6 pseudogene##AB049654|MRPL36|64979|mitochondrial ribosomal protein L36##AF151109|MRPL36|64979|mitochondrial ribosomal protein L36##AF155653|MRPL36|64979|mitochondrial ribosomal protein L36##BC020642|MRPL36|64979|mitochondrial ribosomal protein L36	0.575775	CTCF.p2:-3:0.576
chr15	65728150	65728330	reg1026150.p2	5.803	+	TSC_hg19_v1_chr15_-_65715412 AB052622 NM_020962	-12839	-	TSC_hg19_v1_chr15_-_65715258 AB529157	-12995	-	BC042054 TSC_hg19_v1_chr15_-_65670341 BC067107 NM_004884	-57889	-	AY354202 BC040203 NM_197960 AK302638	81367	-	TSC_hg19_v1_chr15_-_65809976 AK000290 AK296915	81755	-	TSC_hg19_v1_chr15_-_65810028 AF221634 AK291057 NM_017743 NM_130434 NM_197961 BC030688	81811	-	AB052622|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##NM_020962|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##AY354202|DPP8|54878|dipeptidyl-peptidase 8##BC040203|DPP8|54878|dipeptidyl-peptidase 8##NM_197960|DPP8|54878|dipeptidyl-peptidase 8##AK302638|DPP8|54878|dipeptidyl-peptidase 8##AK000290|DPP8|54878|dipeptidyl-peptidase 8##AK296915|DPP8|54878|dipeptidyl-peptidase 8##AF221634|DPP8|54878|dipeptidyl-peptidase 8##AK291057|DPP8|54878|dipeptidyl-peptidase 8##NM_017743|DPP8|54878|dipeptidyl-peptidase 8##NM_130434|DPP8|54878|dipeptidyl-peptidase 8##NM_197961|DPP8|54878|dipeptidyl-peptidase 8##BC030688|DPP8|54878|dipeptidyl-peptidase 8	0.014567	
chr2	166914020	166914146	reg1025436.p1	5.803	+	AB073395 TSC_hg19_v1_chr2_-_166810287 AK057268 AK292942 BC055424 NM_024753	-103782	-	TSC_hg19_v1_chr2_-_166650773 NM_004482	-263297	-	BC056246 TSC_hg19_v1_chr2_-_166650713	-263356	-	AB093548 AB093549 AB098335 AY043484 AF225985 NM_001165963 NM_001165964 NM_006920 EU368119	16071	-	EU368117 NM_001202435 DQ993522	91630	-	TSC_hg19_v1_chr2_-_167232465 AK307549 NM_002977	318397	-	AB073395|TTC21B|79809|tetratricopeptide repeat domain 21B##AK057268|TTC21B|79809|tetratricopeptide repeat domain 21B##AK292942|TTC21B|79809|tetratricopeptide repeat domain 21B##BC055424|TTC21B|79809|tetratricopeptide repeat domain 21B##NM_024753|TTC21B|79809|tetratricopeptide repeat domain 21B##NM_004482|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##BC056246|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##AB093548|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB093549|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB098335|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AY043484|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AF225985|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001165963|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001165964|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_006920|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##EU368119|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##EU368117|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001202435|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AK307549|SCN9A|6335|sodium channel, voltage-gated, type IX, alpha subunit##NM_002977|SCN9A|6335|sodium channel, voltage-gated, type IX, alpha subunit	0.977677	CTCF.p2:-6:0.978
chr2	37395678	37395791	reg1022297.p1	5.803	+	TSC_hg19_v1_chr2_-_37384151 BC040851 NM_001135651 NM_002759	-11472	-	TSC_hg19_v1_chr2_-_37384096 BC022314 BC057805 AK290655	-11663	-	AY302136 NM_001135652 BC143228	-20777	-	BC140797 BC144573 BC144574 NM_001032377	19955	-	TSC_hg19_v1_chr2_+_37423638 BC065768 AK001814	27899	+	TSC_hg19_v1_chr2_-_37458740 M37197 AK312322 NM_005760 BC034475	62994	-	BC040851|EIF2AK2|5610|eukaryotic translation initiation factor 2-alpha kinase 2##NM_001135651|EIF2AK2|5610|eukaryotic translation initiation factor 2-alpha kinase 2##NM_002759|EIF2AK2|5610|eukaryotic translation initiation factor 2-alpha kinase 2##BC022314|EIF2AK2|5610|eukaryotic translation initiation factor 2-alpha kinase 2##BC057805|EIF2AK2|5610|eukaryotic translation initiation factor 2-alpha kinase 2##AK290655|EIF2AK2|5610|eukaryotic translation initiation factor 2-alpha kinase 2##AY302136|EIF2AK2|5610|eukaryotic translation initiation factor 2-alpha kinase 2##NM_001135652|EIF2AK2|5610|eukaryotic translation initiation factor 2-alpha kinase 2##BC143228|EIF2AK2|5610|eukaryotic translation initiation factor 2-alpha kinase 2##BC140797|SULT6B1|391365|sulfotransferase family, cytosolic, 6B, member 1##BC144573|SULT6B1|391365|sulfotransferase family, cytosolic, 6B, member 1##BC144574|SULT6B1|391365|sulfotransferase family, cytosolic, 6B, member 1##NM_001032377|SULT6B1|391365|sulfotransferase family, cytosolic, 6B, member 1##BC065768|LOC100505876|100505876|uncharacterized LOC100505876##AK001814|LOC100505876|100505876|uncharacterized LOC100505876##M37197|CEBPZ|10153|CCAAT/enhancer binding protein (C/EBP), zeta##AK312322|CEBPZ|10153|CCAAT/enhancer binding protein (C/EBP), zeta##NM_005760|CEBPZ|10153|CCAAT/enhancer binding protein (C/EBP), zeta##BC034475|CEBPZ|10153|CCAAT/enhancer binding protein (C/EBP), zeta	0.54861	CTCF.p2:-23:0.549
chr3	72005054	72005234	reg1003435.p2	5.803	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-170873	-	AK313656 NM_173359	-201221	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-201622	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	892404	-	BC017274 TSC_hg19_v1_chr3_-_72897575	892431	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	892448	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.025951	
chr9	130110491	130110633	reg1024992.p1	5.803	+	NM_032293 AK293732 AK095679	-83755	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-225532	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-225600	-	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	48884	+	TSC_hg19_v1_chr9_-_130186602 AK124330	76004	-	NM_007135 TSC_hg19_v1_chr9_+_130186700 AK054606 BC062309 AK302284	76119	+	NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_007135|ZNF79|7633|zinc finger protein 79##AK054606|ZNF79|7633|zinc finger protein 79##BC062309|ZNF79|7633|zinc finger protein 79##AK302284|ZNF79|7633|zinc finger protein 79	0.0	
chr10	52051406	52051507	reg1024438.p2	5.802	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-43116	-	NM_018232	-213571	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-223734	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	332247	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	448254	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	593937	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.0	
chr11	43333415	43333521	reg1024420.p2	5.802	+	AB046800 NM_020929	-3017805	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-3018874	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-6713666	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	50	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	96	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	172	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.05689	
chr11	67174685	67174845	reg1025535.p1	5.802	+	AK126131 TSC_hg19_v1_chr11_+_67171400 BC062999 NM_198517 BC047319 BC036873 BC022202	-3229	+	TSC_hg19_v1_chr11_+_67171379 BC035630	-3377	+	TSC_hg19_v1_chr11_-_67169351 NM_001008709 NM_002708 NM_206873	-5408	-	TSC_hg19_v1_chr11_+_67183148 AK294035 AK295331 EF560746 NM_001166222 NM_020811	8385	+	AK098311 TSC_hg19_v1_chr11_-_67188655 AK127616	13902	-	TSC_hg19_v1_chr11_+_67195964 NM_003952 BC136564 BC000094 AK297527 AB019245 AB208827 BC006106 AF099739 AB016869 AF076931 AB529007	21193	+	BC062999|TBC1D10C|374403|TBC1 domain family, member 10C##NM_198517|TBC1D10C|374403|TBC1 domain family, member 10C##BC047319|TBC1D10C|374403|TBC1 domain family, member 10C##BC036873|TBC1D10C|374403|TBC1 domain family, member 10C##BC022202|TBC1D10C|374403|TBC1 domain family, member 10C##BC035630|TBC1D10C|374403|TBC1 domain family, member 10C##NM_001008709|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##NM_002708|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##NM_206873|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##AK294035|CARNS1|57571|carnosine synthase 1##AK295331|CARNS1|57571|carnosine synthase 1##EF560746|CARNS1|57571|carnosine synthase 1##NM_001166222|CARNS1|57571|carnosine synthase 1##NM_020811|CARNS1|57571|carnosine synthase 1##AK098311|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##AK127616|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##NM_003952|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2##BC136564|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2##BC000094|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2##AK297527|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2##AB019245|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2##AB208827|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2##BC006106|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2##AF099739|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2##AB016869|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2##AF076931|RPS6KB2|6199|ribosomal protein S6 kinase, 70kDa, polypeptide 2	0.047061	
chr15	78202846	78202971	reg1011013.p1	5.802	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-278128	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-278209	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-489646	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	167045	-	NM_001101404	182018	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	220854	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	1.266341	CTCF.p2:0:0.999	CTCF.p2:92:0.267
chr1	91317130	91317221	reg1027247.p1	5.802	+	BC126439 BC126441 AY338397 NM_020063	-134390	-	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	-856459	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-1029611	+	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	169863	-	TSC_hg19_v1_chr1_-_91487583 BC041138 AK291520	170388	-	TSC_hg19_v1_chr1_-_91487586 BC092462	170414	-	BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644##BC041138|ZNF644|84146|zinc finger protein 644##AK291520|ZNF644|84146|zinc finger protein 644##BC092462|ZNF644|84146|zinc finger protein 644	0.798788	CTCF.p2:-107:0.799
chr1	226033623	226033722	reg1024262.p1	5.801	+	DQ892506 DQ895720 CU678903 CR541963 M36374 TSC_hg19_v1_chr1_+_226016535	-17191	+	TSC_hg19_v1_chr1_+_226013054 NM_000120 L25879 J03518 Y00424 L25878 X07936	-20597	+	TSC_hg19_v1_chr1_+_225997825 U34722 BC095430 BC003567 BC008291	-35845	+	TSC_hg19_v1_chr1_-_226070033 AB018335 AK222934 AK222944 BC030245 AK022502	36378	-	NM_014698	36747	-	CU693310 AB590421 DQ896626 AY358873 BC027883 AF081512 AK309263 TSC_hg19_v1_chr1_-_226076847 AK129605 AK222714 AK313115 NM_020997	43136	-	DQ892506|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##DQ895720|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##CR541963|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##M36374|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##NM_000120|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##L25879|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##J03518|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##Y00424|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##L25878|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##X07936|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##U34722|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##BC095430|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##BC003567|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##BC008291|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##AB018335|TMEM63A|9725|transmembrane protein 63A##AK222934|TMEM63A|9725|transmembrane protein 63A##AK222944|TMEM63A|9725|transmembrane protein 63A##BC030245|TMEM63A|9725|transmembrane protein 63A##AK022502|TMEM63A|9725|transmembrane protein 63A##NM_014698|TMEM63A|9725|transmembrane protein 63A##DQ896626|LEFTY1|10637|left-right determination factor 1##AY358873|LEFTY1|10637|left-right determination factor 1##BC027883|LEFTY1|10637|left-right determination factor 1##AF081512|LEFTY1|10637|left-right determination factor 1##AK309263|LEFTY1|10637|left-right determination factor 1##AK129605|LEFTY1|10637|left-right determination factor 1##AK222714|LEFTY1|10637|left-right determination factor 1##AK313115|LEFTY1|10637|left-right determination factor 1##NM_020997|LEFTY1|10637|left-right determination factor 1	0.999173	CTCF.p2:2:0.999
chr13	33041669	33041791	reg1024601.p2	5.801	+	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	-39372	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	-152113	+	BC146956 BC146965 NM_001136571	-155641	-	Z36834 TSC_hg19_v1_chr13_-_33112933 BC010643 U50532 AL049783 AK298546 AK312924 NM_014887 NM_033111	71195	-	TSC_hg19_v1_chr13_+_33160588 NM_015032	118833	+	TSC_hg19_v1_chr13_+_33160610 AL137201	118888	+	BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##Z36834|N4BP2L2|10443|NEDD4 binding protein 2-like 2##BC010643|N4BP2L2|10443|NEDD4 binding protein 2-like 2##U50532|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AL049783|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK298546|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK312924|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_014887|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_033111|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_015032|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.997389	CTCF.p2:-11:0.997
chr16	10608732	10608825	reg1004081.p2	5.801	+	NM_024997 BC137079 BC144468	-86038	+	AK093414 AX748112 TSC_hg19_v1_chr16_+_10479917 AK296565 AK299040 BC033891 BC041882	-128861	+	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	-332101	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	65712	-	HQ258441 BC130336 BC130338 AK057433 NM_144674	179987	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	228926	+	NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1	0.0	
chr2	107254661	107254794	reg1025561.p2	5.801	+	NM_001144013	-169927	-	TSC_hg19_v1_chr2_-_106810781 NM_025076	-443922	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	-443969	-	FJ433885 TSC_hg19_v1_chr2_-_107502508	247758	-	AB058780 NM_001142351 TSC_hg19_v1_chr2_-_107502624	247892	-	TSC_hg19_v1_chr2_-_107503063 FJ433884	248335	-	NM_001144013|RGPD3|653489|RANBP2-like and GRIP domain containing 3##NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	0.238226	CTCF.p2:-39:0.238
chr8	64086425	64086567	reg1025638.p2	5.801	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-5296	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-5352	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-87869	-	NM_152414 AK293979	1406362	+	TSC_hg19_v1_chr8_+_65493611 AK091333	1407168	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	1624783	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.021011	
chr9	126896122	126896252	reg1024604.p2	5.801	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-122116	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-122304	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-203876	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	123823	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	124058	+	TSC_hg19_v1_chr9_+_127020255 AB026289	124077	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chrX	119453307	119453404	reg1022180.p1	5.801	+	TSC_hg19_v1_chrX_-_119445320 AF450484 AK056403 NM_001104544 NM_001104545 NM_017938	-8002	-	TSC_hg19_v1_chrX_-_119445289 AK289684 BC047054	-8070	-	TSC_hg19_v1_chrX_+_119384690 AX721150	-68665	+	AK309999 NM_001142447 NM_012069 AF158383 AF158384 BC117227 BC143404 BC143406 BC143407 HQ258396	42625	+	AK304405 TSC_hg19_v1_chrX_-_119602986	149569	-	TSC_hg19_v1_chrX_-_119603051 AY561849 AB528277 CU678318 DQ892095 DQ895288	149678	-	AF450484|FAM70A|55026|family with sequence similarity 70, member A##AK056403|FAM70A|55026|family with sequence similarity 70, member A##NM_001104544|FAM70A|55026|family with sequence similarity 70, member A##NM_001104545|FAM70A|55026|family with sequence similarity 70, member A##NM_017938|FAM70A|55026|family with sequence similarity 70, member A##AK289684|FAM70A|55026|family with sequence similarity 70, member A##BC047054|FAM70A|55026|family with sequence similarity 70, member A##AK309999|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##NM_001142447|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##NM_012069|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF158383|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF158384|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC117227|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143404|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143406|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143407|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##HQ258396|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AK304405|LAMP2|3920|lysosomal-associated membrane protein 2##AY561849|LAMP2|3920|lysosomal-associated membrane protein 2##DQ892095|LAMP2|3920|lysosomal-associated membrane protein 2##DQ895288|LAMP2|3920|lysosomal-associated membrane protein 2	0.184699	
chr11	107641903	107642011	reg1024293.p2	5.800	+	BC104185 BC113930 BC113987 BC104150 BC094685 AK312097 BC005261 U96094 NM_003063	-59198	-	TSC_hg19_v1_chr11_+_107462073 BC028725	-179881	+	TSC_hg19_v1_chr11_+_107461998 AK303689 AK054794	-179972	+	CU691672 TSC_hg19_v1_chr11_-_107729514 AK023080 BC048302	87548	-	AK300582 TSC_hg19_v1_chr11_-_107729530 BC039195	87631	-	NM_017515	87956	-	BC104185|SLN|6588|sarcolipin##BC113930|SLN|6588|sarcolipin##BC113987|SLN|6588|sarcolipin##BC104150|SLN|6588|sarcolipin##BC094685|SLN|6588|sarcolipin##AK312097|SLN|6588|sarcolipin##BC005261|SLN|6588|sarcolipin##U96094|SLN|6588|sarcolipin##NM_003063|SLN|6588|sarcolipin##BC028725|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK303689|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK054794|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK023080|SLC35F2|54733|solute carrier family 35, member F2##BC048302|SLC35F2|54733|solute carrier family 35, member F2##AK300582|SLC35F2|54733|solute carrier family 35, member F2##BC039195|SLC35F2|54733|solute carrier family 35, member F2##NM_017515|SLC35F2|54733|solute carrier family 35, member F2	0.98318	CTCF.p2:-26:0.983
chr16	26581237	26581335	reg1024023.p1	5.800	+	AF105378 NM_006040	-877940	+	TSC_hg19_v1_chr16_-_25269141 AK303472	-1312081	-	BX648785 AK131342 NM_001012981 AK302399	-1312427	-	NM_001145545 BC031257 AK311574	496961	+	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	633541	+	AK297166 NM_001145348	634009	+	AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##BX648785|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK131342|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001012981|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK302399|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5	0.261203	CTCF.p2:23:0.261
chr19	19521821	19521960	reg1023184.p2	5.800	+	TSC_hg19_v1_chr19_+_19496634 NM_017660 AK303482	-25184	+	TSC_hg19_v1_chr19_+_19431662 AB385396	-90226	+	TSC_hg19_v1_chr19_+_19431637 NM_015329 AB020699	-90256	+	AB464723 DQ891603 DQ894797 AF329483 AK058166 AK313767 BC014611 NM_032037 AF348077	104475	-	TSC_hg19_v1_chr19_+_19626536 AF261134	104675	+	NM_015965 TSC_hg19_v1_chr19_+_19627033 BC009189 AK298891 AK293859 AK293965 BC000589 AF286697	105146	+	NM_017660|GATAD2A|54815|GATA zinc finger domain containing 2A##AK303482|GATAD2A|54815|GATA zinc finger domain containing 2A##NM_015329|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AB020699|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##DQ891603|TSSK6|83983|testis-specific serine kinase 6##DQ894797|TSSK6|83983|testis-specific serine kinase 6##AF329483|TSSK6|83983|testis-specific serine kinase 6##AK058166|TSSK6|83983|testis-specific serine kinase 6##AK313767|TSSK6|83983|testis-specific serine kinase 6##BC014611|TSSK6|83983|testis-specific serine kinase 6##NM_032037|TSSK6|83983|testis-specific serine kinase 6##AF348077|TSSK6|83983|testis-specific serine kinase 6##AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##NM_015965|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC009189|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AK293859|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC000589|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AF286697|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	0.0	
chr7	151630463	151630575	reg1027054.p1	5.800	+	AK074675 NM_016203	-56257	-	BC068598 TSC_hg19_v1_chr7_-_151511929 NM_001040633	-118579	-	TSC_hg19_v1_chr7_-_151329284 BT007127 BC020540 AB025580 AF087875 AK314646 AK001887 NM_024429	-301239	-	NM_145292 AF440404 AK315667 AK093091 AX747915 BC022021 AF440400 BC025391	22979	+	TSC_hg19_v1_chr7_+_151722782 NM_022087	92278	+	TSC_hg19_v1_chr7_+_151722826 AK298911	92313	+	AK074675|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_016203|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC068598|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_001040633|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BT007127|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC020540|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AB025580|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AF087875|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK314646|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK001887|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_024429|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_145292|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440404|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK315667|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK093091|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC022021|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440400|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC025391|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##NM_022087|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)##AK298911|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)	0.823791	CTCF.p2:15:0.616	CTCF.p2:-84:0.208
chr15	40629061	40629201	reg1021707.p1	5.799	+	TSC_hg19_v1_chr15_-_40600137 AK291657 NM_004573	-28986	-	TSC_hg19_v1_chr15_-_40600085 BC009009	-29044	-	BC136467 M95678 TSC_hg19_v1_chr15_-_40600050	-29091	-	TSC_hg19_v1_chr15_-_40630272 BC140897 BC140902 AK126035	1171	-	TSC_hg19_v1_chr15_-_40633122 AK125329 NM_207380	4013	-	TSC_hg19_v1_chr15_+_40643233 NM_001145643 BC061640	14104	+	AK291657|PLCB2|5330|phospholipase C, beta 2##NM_004573|PLCB2|5330|phospholipase C, beta 2##BC009009|PLCB2|5330|phospholipase C, beta 2##BC136467|PLCB2|5330|phospholipase C, beta 2##M95678|PLCB2|5330|phospholipase C, beta 2##BC140897|C15orf52|388115|chromosome 15 open reading frame 52##BC140902|C15orf52|388115|chromosome 15 open reading frame 52##AK126035|C15orf52|388115|chromosome 15 open reading frame 52##AK125329|C15orf52|388115|chromosome 15 open reading frame 52##NM_207380|C15orf52|388115|chromosome 15 open reading frame 52##NM_001145643|PHGR1|644844|proline/histidine/glycine-rich 1##BC061640|PHGR1|644844|proline/histidine/glycine-rich 1	0.0	
chr17	32498390	32498497	reg1026171.p1	5.799	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	-14756	-	AL834182 NM_183377	-878438	-	AF216311 NM_173847 BC100886 BC100887	-1179541	+	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	83888	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	98830	+	NM_002986 BC017850 Z69291 Z75668 U46573 Z75669 DQ891969 DQ895158 AB463482 CR457421	114313	+	EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7##NM_002986|CCL11|6356|chemokine (C-C motif) ligand 11##BC017850|CCL11|6356|chemokine (C-C motif) ligand 11##Z69291|CCL11|6356|chemokine (C-C motif) ligand 11##Z75668|CCL11|6356|chemokine (C-C motif) ligand 11##U46573|CCL11|6356|chemokine (C-C motif) ligand 11##Z75669|CCL11|6356|chemokine (C-C motif) ligand 11##DQ891969|CCL11|6356|chemokine (C-C motif) ligand 11##DQ895158|CCL11|6356|chemokine (C-C motif) ligand 11##CR457421|CCL11|6356|chemokine (C-C motif) ligand 11	0.986191	CTCF.p2:-8:0.986
chr17	79995218	79995398	reg1023800.p2	5.799	+	TSC_hg19_v1_chr17_+_79989582 BC009605 BC015197 NM_005052 AF008591 AB528368 DQ893123 DQ896400 CU679415 AF498966 BT019443	-5747	+	TSC_hg19_v1_chr17_+_79981196 BC014109 NM_144999	-14075	+	TSC_hg19_v1_chr17_-_79980755 BC011610 U95006 U95007 BC009571 NM_144998	-14577	-	BC003018 AB013846 AF515623 AF515624 AF515625 BT006881 BC001470 AF113123 AF139841 AK226040 NM_001195218 NM_016286 TSC_hg19_v1_chr17_-_79995574	261	-	AK094016 AX748413 TSC_hg19_v1_chr17_-_80009293	13959	-	NM_002917 TSC_hg19_v1_chr17_-_80009689 BC146805 AK293568	14384	-	BC009605|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##BC015197|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##NM_005052|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##AF008591|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##DQ893123|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##DQ896400|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##AF498966|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##BT019443|RAC3|5881|ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)##BC014109|LRRC45|201255|leucine rich repeat containing 45##NM_144999|LRRC45|201255|leucine rich repeat containing 45##BC011610|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##U95006|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##U95007|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##BC009571|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##NM_144998|STRA13|201254|stimulated by retinoic acid 13 homolog (mouse)##BC003018|DCXR|51181|dicarbonyl/L-xylulose reductase##AB013846|DCXR|51181|dicarbonyl/L-xylulose reductase##AF515623|DCXR|51181|dicarbonyl/L-xylulose reductase##AF515624|DCXR|51181|dicarbonyl/L-xylulose reductase##AF515625|DCXR|51181|dicarbonyl/L-xylulose reductase##BT006881|DCXR|51181|dicarbonyl/L-xylulose reductase##BC001470|DCXR|51181|dicarbonyl/L-xylulose reductase##AF113123|DCXR|51181|dicarbonyl/L-xylulose reductase##AF139841|DCXR|51181|dicarbonyl/L-xylulose reductase##AK226040|DCXR|51181|dicarbonyl/L-xylulose reductase##NM_001195218|DCXR|51181|dicarbonyl/L-xylulose reductase##NM_016286|DCXR|51181|dicarbonyl/L-xylulose reductase##AK094016|RFNG|5986|RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002917|RFNG|5986|RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC146805|RFNG|5986|RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK293568|RFNG|5986|RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	0.973819	CTCF.p2:-26:0.974
chr20	62289552	62289703	reg1022791.p1	5.799	+	AF217795 NM_016434 NM_032957	-465	+	DQ893121 DQ896397 BC047671 BC021084 BC032527 AF069709 BC056873 TSC_hg19_v1_chr20_-_62284781 AK074860 NM_015894 AK310010 BC009381 BC025234	-4867	-	TSC_hg19_v1_chr20_-_62258426 AK298927	-31190	-	TSC_hg19_v1_chr20_+_62289667 AK302508 AK304798 AK299332 BC000673	54	+	TSC_hg19_v1_chr20_+_62321100 AL080127	31521	+	TSC_hg19_v1_chr20_+_62328005 NM_003823 AF104419 AY358279 BC017065	38384	+	AF217795|RTEL1|51750|regulator of telomere elongation helicase 1##NM_016434|RTEL1|51750|regulator of telomere elongation helicase 1##NM_032957|RTEL1|51750|regulator of telomere elongation helicase 1##DQ893121|STMN3|50861|stathmin-like 3##DQ896397|STMN3|50861|stathmin-like 3##BC047671|STMN3|50861|stathmin-like 3##BC032527|STMN3|50861|stathmin-like 3##AF069709|STMN3|50861|stathmin-like 3##BC056873|STMN3|50861|stathmin-like 3##AK074860|STMN3|50861|stathmin-like 3##NM_015894|STMN3|50861|stathmin-like 3##AK310010|STMN3|50861|stathmin-like 3##BC009381|STMN3|50861|stathmin-like 3##BC025234|STMN3|50861|stathmin-like 3##AK298927|GMEB2|26205|glucocorticoid modulatory element binding protein 2##AK302508|RTEL1|51750|regulator of telomere elongation helicase 1##AK304798|RTEL1|51750|regulator of telomere elongation helicase 1##AK299332|RTEL1|51750|regulator of telomere elongation helicase 1##AL080127|RTEL1|51750|regulator of telomere elongation helicase 1##NM_003823|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AF104419|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AY358279|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##BC017065|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	0.0	
chr6	89471560	89471740	reg1022428.p2	5.799	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-595884	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-616614	-	BC029488 NM_030960 AF203447	-714120	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	201541	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	201658	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	201697	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.060701	
chr6_cox_hap2	3683507	3683653	reg1025446.p1	5.799	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999422	CTCF.p2:15:0.999
chr1	165114184	165114319	reg1024384.p1	5.798	+	TSC_hg19_v1_chr1_+_164818083 AK022520	-296128	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	-585265	+	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	-585660	+	AK122800 NM_001174069	211224	-	AK127724 NM_177398	211700	-	AB593016 AK312922 NM_006917	300294	-	AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AB593016|RXRG|6258|retinoid X receptor, gamma##AK312922|RXRG|6258|retinoid X receptor, gamma##NM_006917|RXRG|6258|retinoid X receptor, gamma	0.999602	CTCF.p2:-16:1.000
chr12	10563864	10564019	reg1027638.p1	5.798	+	AF461811 NM_001199805	-1197	-	TSC_hg19_v1_chr12_-_10562143 AK292020 AK310717 AB590270 AF350018 AF350019 CU676066 DQ891978 DQ895169 BC017784 U96845 AJ001683 NM_013431	-1693	-	BC039836 AK226161 AK292059 NM_007360	-21307	-	AK307860 AK311162 AF078550 AF350016 L14542 NM_002261 NM_007333	9176	-	BC106069 AK295525 AF260134 AF350017 NM_002260 X54869 Y13055 AF461157 BC093644 BC112039	24638	-	X54867 X54868 AF461812 NM_002259 NM_007328	42012	-	AF461811|KLRC4-KLRK1|100528032|KLRC4-KLRK1 readthrough##NM_001199805|KLRC4-KLRK1|100528032|KLRC4-KLRK1 readthrough##AK292020|KLRC4-KLRK1|100528032|KLRC4-KLRK1 readthrough##AK310717|KLRC4-KLRK1|100528032|KLRC4-KLRK1 readthrough##AF350018|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##AF350019|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##DQ891978|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##DQ895169|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##BC017784|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##U96845|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##AJ001683|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##NM_013431|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##BC039836|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AK226161|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AK292059|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##NM_007360|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AF078550|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##AF350016|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##L14542|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##NM_002261|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##NM_007333|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##X54867|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##X54868|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##AF461812|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_002259|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_007328|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1	0.0	
chr2	218858676	218858834	reg1025611.p1	5.798	+	AK001785 TSC_hg19_v1_chr2_-_218843551	-15209	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	-49974	-	BC029516 NM_003284	-1133974	-	TSC_hg19_v1_chr2_-_218867719 AK309785	8968	-	NM_198483	74982	+	U11872 NM_001168298	131249	+	AK001785|TNS1|7145|tensin 1##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AK309785|TNS1|7145|tensin 1##NM_198483|RUFY4|285180|RUN and FYVE domain containing 4##U11872|CXCR2|3579|chemokine (C-X-C motif) receptor 2##NM_001168298|CXCR2|3579|chemokine (C-X-C motif) receptor 2	0.999895	CTCF.p2:14:1.000
chr2	54403879	54403963	reg1022421.p2	5.798	+	NM_138448 AK307096 BC012290 X84195 TSC_hg19_v1_chr2_+_54342769	-61327	+	TSC_hg19_v1_chr2_-_54198154 AB621805	-205789	-	D38521 TSC_hg19_v1_chr2_-_54197945 AY894756 AY894754 AY894755 NM_014614	-206040	-	BC068576 AK097417 NM_001003937	79454	-	AK097617 NM_001100396 BC126244 BC126246 BC144191 BC144192 BC031669	154167	+	TSC_hg19_v1_chr2_+_54683463 NM_003128 AB371586 AB209748	279691	+	NM_138448|ACYP2|98|acylphosphatase 2, muscle type##AK307096|ACYP2|98|acylphosphatase 2, muscle type##BC012290|ACYP2|98|acylphosphatase 2, muscle type##X84195|ACYP2|98|acylphosphatase 2, muscle type##D38521|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894756|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894754|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894755|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##NM_014614|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##BC068576|TSPYL6|388951|TSPY-like 6##AK097417|TSPYL6|388951|TSPY-like 6##NM_001003937|TSPYL6|388951|TSPY-like 6##AK097617|C2orf73|129852|chromosome 2 open reading frame 73##NM_001100396|C2orf73|129852|chromosome 2 open reading frame 73##BC126244|C2orf73|129852|chromosome 2 open reading frame 73##BC126246|C2orf73|129852|chromosome 2 open reading frame 73##BC144191|C2orf73|129852|chromosome 2 open reading frame 73##BC144192|C2orf73|129852|chromosome 2 open reading frame 73##BC031669|C2orf73|129852|chromosome 2 open reading frame 73##NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	0.870546	CTCF.p2:-13:0.871
chr21	34572340	34572520	reg1002621.p2	5.797	+	TSC_hg19_v1_chr21_+_34444006 BC011252	-128385	+	TSC_hg19_v1_chr21_+_34442554 AB463154 DQ896828 BC026989	-129869	+	TSC_hg19_v1_chr21_+_34442446 BC033290 NM_138983 AL834450 AB209791	-129978	+	BC002793 NM_000874 NM_207584 NM_207585 TSC_hg19_v1_chr21_+_34602236	29790	+	TSC_hg19_v1_chr21_+_34602281 L41942 L41944	29849	+	TSC_hg19_v1_chr21_+_34602305 BC013156 X77722 X89814 U29584	29972	+	BC011252|OLIG1|116448|oligodendrocyte transcription factor 1##DQ896828|OLIG1|116448|oligodendrocyte transcription factor 1##BC026989|OLIG1|116448|oligodendrocyte transcription factor 1##BC033290|OLIG1|116448|oligodendrocyte transcription factor 1##NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1##AL834450|OLIG1|116448|oligodendrocyte transcription factor 1##AB209791|OLIG1|116448|oligodendrocyte transcription factor 1##BC002793|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_000874|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207585|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41942|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41944|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##BC013156|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X77722|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X89814|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##U29584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2	0.0	
chr5	128010670	128010781	reg1025155.p2	5.797	+	NM_001999 TSC_hg19_v1_chr5_-_127873939 AF193046	-136884	-	TSC_hg19_v1_chr5_-_127873553 AK300440	-137208	-	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	-591252	+	TSC_hg19_v1_chr5_+_128300789 BC041945	290078	+	TSC_hg19_v1_chr5_+_128301169 BX537383 NM_014031 NM_001017372 AK313456 AL833117	290472	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	419700	+	NM_001999|FBN2|2201|fibrillin 2##AF193046|FBN2|2201|fibrillin 2##AK300440|FBN2|2201|fibrillin 2##AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC041945|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##BX537383|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_014031|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_001017372|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AK313456|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AL833117|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1	0.852027	CTCF.p2:8:0.852
chr7	55338884	55338994	reg1023812.p1	5.797	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-251993	+	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	-252194	+	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	-512018	-	AK095857 NM_018697	94201	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	94633	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	301101	-	AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor##AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	0.451618	CTCF.p2:15:0.452
chrX	19353254	19353408	reg1003024.p3	5.797	+	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	-212664	-	TSC_hg19_v1_chrX_-_19002476 NM_000292	-350869	-	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	-644287	+	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	8751	+	NM_001001671	180047	-	TSC_hg19_v1_chrX_-_19689029 AK293237 NM_001184960	335725	-	BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001001671|MAP3K15|389840|mitogen-activated protein kinase kinase kinase 15##AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1	0.33328	CTCF.p2:-3:0.255
chr16	11352629	11352779	reg1023886.p1	5.796	+	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	-2654	-	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-314261	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-316469	-	X63758 BC096135 BC096136 BC096137 NM_005425	10434	-	NM_021247	14747	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	17616	-	AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2	0.0	
chr8	139115082	139115206	reg1021891.p1	5.796	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-2644943	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-2645486	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-3389870	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	393962	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	811100	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	1600138	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.908228	CTCF.p2:44:0.908
chr1	605999	606090	reg1023692.p1	5.795	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-238396	+	NM_001005484	-536954	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-576639	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	15998	-	TSC_hg19_v1_chr1_-_714015 BC006361	107973	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	156851	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	0.26573	CTCF.p2:30:0.266
chr21	47604382	47604563	reg1022060.p1	5.795	+	TSC_hg19_v1_chr21_-_47604362 AK309847 AK304535 NM_001142854 NM_032261	-97	-	TSC_hg19_v1_chr21_-_47604340 BC084577	-126	-	AL136871 TSC_hg19_v1_chr21_-_47604330	-156	-	X87809 TSC_hg19_v1_chr21_-_47648594	44033	-	TSC_hg19_v1_chr21_-_47648618 AK226141 CU690148 DQ891234 DQ894418	44170	-	TSC_hg19_v1_chr21_-_47648679 D63807 S81221 BC035638	44205	-	AK309847|C21orf56|84221|chromosome 21 open reading frame 56##AK304535|C21orf56|84221|chromosome 21 open reading frame 56##NM_001142854|C21orf56|84221|chromosome 21 open reading frame 56##NM_032261|C21orf56|84221|chromosome 21 open reading frame 56##BC084577|C21orf56|84221|chromosome 21 open reading frame 56##AL136871|C21orf56|84221|chromosome 21 open reading frame 56##X87809|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##AK226141|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##DQ891234|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##DQ894418|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##D63807|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##S81221|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##BC035638|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)	0.0	
chr1	227918189	227918281	reg1026507.p1	5.794	+	AK055266 AK093736 BC032775 TSC_hg19_v1_chr1_+_227916386	-1918	+	AK311313 TSC_hg19_v1_chr1_+_227751265	-166954	+	TSC_hg19_v1_chr1_+_227751254 NM_178549 AK026475 AK307248 BC042500	-166997	+	AY090635 NM_053052	4461	+	TSC_hg19_v1_chr1_-_227922985 BC011928	4736	-	TSC_hg19_v1_chr1_-_227923113 AK023030 AK022579 NM_001161465 NM_023007 AB528287	4864	-	AK055266|LOC100130093|100130093|uncharacterized LOC100130093##AK093736|LOC100130093|100130093|uncharacterized LOC100130093##AK311313|ZNF678|339500|zinc finger protein 678##NM_178549|ZNF678|339500|zinc finger protein 678##AK026475|ZNF678|339500|zinc finger protein 678##AK307248|ZNF678|339500|zinc finger protein 678##BC042500|ZNF678|339500|zinc finger protein 678##AY090635|SNAP47|116841|synaptosomal-associated protein, 47kDa##NM_053052|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC011928|JMJD4|65094|jumonji domain containing 4##AK023030|JMJD4|65094|jumonji domain containing 4##AK022579|JMJD4|65094|jumonji domain containing 4##NM_001161465|JMJD4|65094|jumonji domain containing 4##NM_023007|JMJD4|65094|jumonji domain containing 4	0.046734	
chr16	30669376	30669480	reg1022405.p2	5.794	+	TSC_hg19_v1_chr16_+_30662286 BC010232 BC050677 NM_024031 BC011573 BC000119 AK074783	-7163	+	TSC_hg19_v1_chr16_+_30662098 CR936781 AK125716	-7328	+	AK310459 AB065282 BC014000 NM_138447 TSC_hg19_v1_chr16_-_30621684	-47772	-	NM_001105079	6349	+	TSC_hg19_v1_chr16_+_30676113 AK298229	6688	+	AB621816 TSC_hg19_v1_chr16_+_30709918	40508	+	BC010232|PRR14|78994|proline rich 14##BC050677|PRR14|78994|proline rich 14##NM_024031|PRR14|78994|proline rich 14##BC011573|PRR14|78994|proline rich 14##BC000119|PRR14|78994|proline rich 14##AK074783|PRR14|78994|proline rich 14##CR936781|PRR14|78994|proline rich 14##AK125716|PRR14|78994|proline rich 14##AK310459|ZNF689|115509|zinc finger protein 689##AB065282|ZNF689|115509|zinc finger protein 689##BC014000|ZNF689|115509|zinc finger protein 689##NM_138447|ZNF689|115509|zinc finger protein 689##NM_001105079|FBRS|64319|fibrosin##AK298229|FBRS|64319|fibrosin	0.784432	CTCF.p2:-4:0.771
chr17	70385440	70385621	reg1010800.p2	5.794	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-268290	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-268360	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-268371	+	AK000477 TSC_hg19_v1_chr17_-_70588944	203413	-	AF331643 TSC_hg19_v1_chr17_-_71088816	703286	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	703293	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr7	35077580	35077700	reg1025038.p2	5.794	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	-379721	+	AK289963 NM_133468 AK096150 BC060868	-1132498	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-1908559	+	DQ287932 NM_015283	12	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	148152	-	TSC_hg19_v1_chr7_-_35293701 NM_001077653 NM_001166220 DQ986374	216090	-	AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##NM_001077653|TBX20|57057|T-box 20##NM_001166220|TBX20|57057|T-box 20##DQ986374|TBX20|57057|T-box 20	0.087152	
chr8	110664778	110664901	reg1024318.p1	5.794	+	AL713645 AB195676 AB195677 AB195678 NM_001099747 NM_001099748 NM_001099749 NM_001099750 NM_017786	-3770	-	AK055246 NM_001099751 NM_001099752	-7056	-	BC012082 AK090559 AK096558 TSC_hg19_v1_chr8_-_110657047 NM_001099753 NM_001099754 NM_001099755	-7802	-	AK290469 NM_001099745 NM_001099746	28394	-	NM_001099743 NM_001099744	39180	-	BC028739 AK313469 AF167082 NM_014379 AK297393	322127	-	AL713645|SYBU|55638|syntabulin (syntaxin-interacting)##AB195676|SYBU|55638|syntabulin (syntaxin-interacting)##AB195677|SYBU|55638|syntabulin (syntaxin-interacting)##AB195678|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)##NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)##AK055246|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099751|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099752|SYBU|55638|syntabulin (syntaxin-interacting)##BC012082|SYBU|55638|syntabulin (syntaxin-interacting)##AK090559|SYBU|55638|syntabulin (syntaxin-interacting)##AK096558|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099753|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099754|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099755|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1	0.0	
chrX	122307853	122307987	reg1023536.p1	5.794	+	TSC_hg19_v1_chrX_+_120181464 BC050732 NM_012084 AK313356	-2126480	+	BC029540 NM_001080141 NM_001080146	-2188283	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080141 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	-2193143	-	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	10320	+	TSC_hg19_v1_chrX_-_122866885 AK001758	558963	-	TSC_hg19_v1_chrX_-_122866897 NM_001081550	558977	-	BC050732|GLUD2|2747|glutamate dehydrogenase 2##NM_012084|GLUD2|2747|glutamate dehydrogenase 2##AK313356|GLUD2|2747|glutamate dehydrogenase 2##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##AK001758|THOC2|57187|THO complex 2##NM_001081550|THOC2|57187|THO complex 2	0.973055	CTCF.p2:-23:0.973
chr14	23546187	23546316	reg1024484.p2	5.793	+	TSC_hg19_v1_chr14_-_23540779 NM_001164816 NM_001164817	-5468	-	AF124727 BX247975 TSC_hg19_v1_chr14_-_23540768 AF124728	-5501	-	AK057922 BC110867 TSC_hg19_v1_chr14_-_23526749 AK307746 BX248750 BC142724 AK289576 NM_022478 NM_144985	-19475	-	TSC_hg19_v1_chr14_+_23563968 AK024794	17682	+	TSC_hg19_v1_chr14_-_23564329 AK299034 AB014570	18063	-	TSC_hg19_v1_chr14_+_23564713 NM_017924 AF061731 BC056255	18457	+	NM_001164816|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164817|ACIN1|22985|apoptotic chromatin condensation inducer 1##AF124727|ACIN1|22985|apoptotic chromatin condensation inducer 1##BX247975|ACIN1|22985|apoptotic chromatin condensation inducer 1##AF124728|ACIN1|22985|apoptotic chromatin condensation inducer 1##AK057922|CDH24|64403|cadherin 24, type 2##BC110867|CDH24|64403|cadherin 24, type 2##AK307746|CDH24|64403|cadherin 24, type 2##BX248750|CDH24|64403|cadherin 24, type 2##BC142724|CDH24|64403|cadherin 24, type 2##AK289576|CDH24|64403|cadherin 24, type 2##NM_022478|CDH24|64403|cadherin 24, type 2##NM_144985|CDH24|64403|cadherin 24, type 2##AK024794|C14orf119|55017|chromosome 14 open reading frame 119##AK299034|ACIN1|22985|apoptotic chromatin condensation inducer 1##AB014570|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_017924|C14orf119|55017|chromosome 14 open reading frame 119##AF061731|C14orf119|55017|chromosome 14 open reading frame 119##BC056255|C14orf119|55017|chromosome 14 open reading frame 119	0.999063	CTCF.p2:-12:0.999
chr8	102534095	102534200	reg1024971.p1	5.793	+	TSC_hg19_v1_chr8_+_102504840 AK023844 AK292853 BC069618 BC069633 BC069638 BC129822 BC129823	-29237	+	TSC_hg19_v1_chr8_+_102504667 NM_024915 AK296817 AK310221	-29482	+	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	-316193	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	269036	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	269053	-	NM_032041	269291	-	AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##NM_032041|NCALD|83988|neurocalcin delta	0.0	
chr11	131455353	131455469	reg1018785.p1	5.792	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-214942	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-669023	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-669066	-	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	325213	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	325928	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	1357603	-	NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.902869	CTCF.p2:-14:0.903
chr1	4363140	4363283	reg1025282.p1	5.792	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-546366	-	TSC_hg19_v1_chr1_-_3816816 CU688284 BC035643 BC047611	-546448	-	BC048797 NM_004402	-589367	+	TSC_hg19_v1_chr1_+_4714668 AF175409	351518	+	AY282806 NM_001042478 NM_018836	351893	+	NM_001199861	1689146	+	BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##BC035643|C1orf174|339448|chromosome 1 open reading frame 174##BC047611|C1orf174|339448|chromosome 1 open reading frame 174##BC048797|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)##NM_004402|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)##AF175409|AJAP1|55966|adherens junctions associated protein 1##AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2	0.0	
chr5	36744799	36744938	reg1020047.p1	5.792	+	NM_001166695 U03504 AB529121 AY954110 TSC_hg19_v1_chr5_+_36608562	-136372	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	-138140	+	NM_001166696 NM_004172	-138412	+	TSC_hg19_v1_chr5_-_36876762 AK000901	131895	-	TSC_hg19_v1_chr5_+_36876875 NM_015384 NM_133433 AJ627032 AJ640137	131996	+	TSC_hg19_v1_chr5_+_36876945 BC146821 BX640644 BC131490 AK290347 BX538178 BX538177	132202	+	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK000901|LOC646719|646719|uncharacterized LOC646719##NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)##NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)##BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)##BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)##BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)##AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)	0.0	
chrUn_gl000222	30012	30120	reg1024710.p1	5.792	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.992503	CTCF.p2:21:0.993
chr14	92463324	92463455	reg1026800.p1	5.791	+	TSC_hg19_v1_chr14_-_92414010 AY358898 NM_006329	-49365	-	AF112152 AF093118 BX248290 BC022280 TSC_hg19_v1_chr14_-_92413757 AK075147	-49615	-	AK093876 AX748346 NM_001128596 TSC_hg19_v1_chr14_-_92333881	-129521	-	BC146845 AF007217 BC002656 BC069008 TSC_hg19_v1_chr14_-_92506382 Y12490 BC142956 AK307489 NM_004239	42961	-	GQ176641 GQ176830 U64822 GQ176805 AB528462 BC033711 DQ891282 EU176576 TSC_hg19_v1_chr14_-_92572937 AK225884 GQ176809 GQ176452 GQ176644 GQ176714 GQ176825 GQ176836 GQ176550 GQ176806 GQ176835 GQ176810 U64821 AK314919 GQ176433 GQ176434 GQ176435 GQ176436 GQ176437 GQ176438 GQ176439 GQ176440 GQ176441 GQ176442 GQ176443 GQ176444 GQ176445 GQ176446 GQ176447 GQ176448 GQ176450 GQ176451 GQ176453 GQ176454 GQ176455 GQ176456 GQ176457 GQ176458 GQ176459 GQ176460 GQ176461 GQ176462 GQ176463 GQ176464 GQ176465 GQ176466 GQ176467 GQ176468 GQ176469 GQ176470 GQ176471 GQ176472 GQ176473 GQ176474 GQ176475 GQ176476 GQ176477 GQ176478 GQ176479 GQ176480 GQ176481 GQ176482 GQ176483 GQ176484 GQ176485 GQ176486 GQ176487 GQ176488 GQ176489 GQ176491 GQ176492 GQ176493 GQ176494 GQ176495 GQ176496 GQ176497 GQ176498 GQ176499 GQ176500 GQ176501 GQ176502 GQ176503 GQ176504 GQ176505 GQ176506 GQ176507 GQ176508 GQ176509 GQ176510 GQ176511 GQ176512 GQ176513 GQ176514 GQ176515 GQ176516 GQ176517 GQ176518 GQ176519 GQ176520 GQ176521 GQ176522 GQ176523 GQ176524 GQ176525 GQ176526 GQ176527 GQ176528 GQ176529 GQ176530 GQ176531 GQ176532 GQ176533 GQ176534 GQ176535 GQ176536 GQ176537 GQ176538 GQ176539 GQ176542 GQ176543 GQ176544 GQ176545 GQ176546 GQ176547 GQ176548 GQ176549 GQ176551 GQ176552 GQ176553 GQ176554 GQ176555 GQ176556 GQ176557 GQ176558 GQ176559 GQ176560 GQ176561 GQ176562 GQ176563 GQ176564 GQ176565 GQ176566 GQ176567 GQ176568 GQ176569 GQ176570 GQ176571 GQ176572 GQ176573 GQ176574 GQ176575 GQ176576 GQ176577 GQ176578 GQ176579 GQ176580 GQ176581 GQ176582 GQ176583 GQ176584 GQ176585 GQ176586 GQ176587 GQ176588 GQ176589 GQ176590 GQ176591 GQ176592 GQ176593 GQ176594 GQ176595 GQ176596 GQ176597 GQ176598 GQ176599 GQ176600 GQ176601 GQ176602 GQ176603 GQ176604 GQ176605 GQ176607 GQ176608 GQ176609 GQ176610 GQ176611 GQ176612 GQ176613 GQ176614 GQ176616 GQ176617 GQ176619 GQ176620 GQ176621 GQ176622 GQ176623 GQ176624 GQ176625 GQ176626 GQ176627 GQ176628 GQ176630 GQ176631 GQ176632 GQ176633 GQ176635 GQ176637 GQ176638 GQ176639 GQ176640 GQ176642 GQ176643 GQ176645 GQ176646 GQ176647 GQ176648 GQ176649 GQ176650 GQ176653 GQ176654 GQ176657 GQ176658 GQ176661 GQ176662 GQ176663 GQ176664 GQ176665 GQ176666 GQ176667 GQ176668 GQ176670 GQ176671 GQ176673 GQ176674 GQ176675 GQ176676 GQ176677 GQ176678 GQ176679 GQ176680 GQ176681 GQ176682 GQ176683 GQ176684 GQ176685 GQ176686 GQ176687 GQ176688 GQ176689 GQ176690 GQ176691 GQ176692 GQ176693 GQ176694 GQ176695 GQ176696 GQ176697 GQ176698 GQ176699 GQ176700 GQ176701 GQ176702 GQ176703 GQ176704 GQ176705 GQ176706 GQ176707 GQ176708 GQ176709 GQ176710 GQ176711 GQ176712 GQ176713 GQ176715 GQ176716 GQ176717 GQ176718 GQ176719 GQ176720 GQ176721 GQ176722 GQ176723 GQ176724 GQ176725 GQ176726 GQ176727 GQ176728 GQ176729 GQ176730 GQ176731 GQ176732 GQ176733 GQ176735 GQ176736 GQ176737 GQ176738 GQ176739 GQ176740 GQ176741 GQ176742 GQ176743 GQ176744 GQ176745 GQ176746 GQ176747 GQ176748 GQ176749 GQ176750 GQ176751 GQ176752 GQ176753 GQ176754 GQ176755 GQ176756 GQ176757 GQ176758 GQ176759 GQ176760 GQ176761 GQ176762 GQ176763 GQ176764 GQ176765 GQ176766 GQ176767 GQ176768 GQ176769 GQ176770 GQ176771 GQ176772 GQ176773 GQ176774 GQ176775 GQ176776 GQ176777 GQ176778 GQ176779 GQ176780 GQ176781 GQ176782 GQ176783 GQ176784 GQ176785 GQ176786 GQ176787 GQ176788 GQ176789 GQ176790 GQ176791 GQ176792 GQ176793 GQ176794 GQ176795 GQ176796 GQ176797 GQ176798 GQ176799 GQ176800 GQ176801 GQ176802 GQ176803 GQ176804 GQ176807 GQ176811 GQ176812 GQ176813 GQ176814 GQ176815 GQ176816 GQ176817 GQ176818 GQ176819 GQ176820 GQ176821 GQ176822 GQ176823 GQ176824 GQ176826 GQ176827 GQ176828 GQ176829 GQ176831 GQ176832 GQ176833 GQ176834 GQ176837 GQ176838 GQ176839 GQ176840 GQ176841 GQ176842 GQ176843 GQ176844 GQ176845 GQ176846 GQ176847 BC095402 AK307720 S75313 BC022245	109529	-	TSC_hg19_v1_chr14_-_92572957 AB050194 U64820 NM_001127696 NM_001127697 NM_001164774 NM_001164776 NM_001164777 NM_001164778 NM_001164779 NM_001164780 NM_001164781 NM_001164782 NM_004993 NM_030660	109589	-	AY358898|FBLN5|10516|fibulin 5##NM_006329|FBLN5|10516|fibulin 5##AF112152|FBLN5|10516|fibulin 5##AF093118|FBLN5|10516|fibulin 5##BX248290|FBLN5|10516|fibulin 5##BC022280|FBLN5|10516|fibulin 5##AK075147|FBLN5|10516|fibulin 5##AK093876|TC2N|123036|tandem C2 domains, nuclear##NM_001128596|TC2N|123036|tandem C2 domains, nuclear##BC146845|TRIP11|9321|thyroid hormone receptor interactor 11##AF007217|TRIP11|9321|thyroid hormone receptor interactor 11##BC002656|TRIP11|9321|thyroid hormone receptor interactor 11##BC069008|TRIP11|9321|thyroid hormone receptor interactor 11##Y12490|TRIP11|9321|thyroid hormone receptor interactor 11##AK307489|TRIP11|9321|thyroid hormone receptor interactor 11##NM_004239|TRIP11|9321|thyroid hormone receptor interactor 11##U64822|ATXN3|4287|ataxin 3##GQ176805|ATXN3|4287|ataxin 3##BC033711|ATXN3|4287|ataxin 3##DQ891282|ATXN3|4287|ataxin 3##EU176576|ATXN3|4287|ataxin 3##AK225884|ATXN3|4287|ataxin 3##GQ176809|ATXN3|4287|ataxin 3##GQ176452|ATXN3|4287|ataxin 3##GQ176644|ATXN3|4287|ataxin 3##GQ176714|ATXN3|4287|ataxin 3##GQ176836|ATXN3|4287|ataxin 3##GQ176550|ATXN3|4287|ataxin 3##GQ176835|ATXN3|4287|ataxin 3##GQ176810|ATXN3|4287|ataxin 3##U64821|ATXN3|4287|ataxin 3##AK314919|ATXN3|4287|ataxin 3##GQ176435|ATXN3|4287|ataxin 3##GQ176436|ATXN3|4287|ataxin 3##GQ176437|ATXN3|4287|ataxin 3##GQ176438|ATXN3|4287|ataxin 3##GQ176443|ATXN3|4287|ataxin 3##GQ176445|ATXN3|4287|ataxin 3##GQ176446|ATXN3|4287|ataxin 3##GQ176453|ATXN3|4287|ataxin 3##GQ176454|ATXN3|4287|ataxin 3##GQ176455|ATXN3|4287|ataxin 3##GQ176456|ATXN3|4287|ataxin 3##GQ176457|ATXN3|4287|ataxin 3##GQ176459|ATXN3|4287|ataxin 3##GQ176461|ATXN3|4287|ataxin 3##GQ176462|ATXN3|4287|ataxin 3##GQ176463|ATXN3|4287|ataxin 3##GQ176464|ATXN3|4287|ataxin 3##GQ176465|ATXN3|4287|ataxin 3##GQ176466|ATXN3|4287|ataxin 3##GQ176467|ATXN3|4287|ataxin 3##GQ176469|ATXN3|4287|ataxin 3##GQ176474|ATXN3|4287|ataxin 3##GQ176475|ATXN3|4287|ataxin 3##GQ176476|ATXN3|4287|ataxin 3##GQ176477|ATXN3|4287|ataxin 3##GQ176479|ATXN3|4287|ataxin 3##GQ176480|ATXN3|4287|ataxin 3##GQ176482|ATXN3|4287|ataxin 3##GQ176483|ATXN3|4287|ataxin 3##GQ176484|ATXN3|4287|ataxin 3##GQ176485|ATXN3|4287|ataxin 3##GQ176486|ATXN3|4287|ataxin 3##GQ176487|ATXN3|4287|ataxin 3##GQ176488|ATXN3|4287|ataxin 3##GQ176489|ATXN3|4287|ataxin 3##GQ176492|ATXN3|4287|ataxin 3##GQ176493|ATXN3|4287|ataxin 3##GQ176494|ATXN3|4287|ataxin 3##GQ176496|ATXN3|4287|ataxin 3##GQ176497|ATXN3|4287|ataxin 3##GQ176499|ATXN3|4287|ataxin 3##GQ176510|ATXN3|4287|ataxin 3##GQ176511|ATXN3|4287|ataxin 3##GQ176525|ATXN3|4287|ataxin 3##GQ176529|ATXN3|4287|ataxin 3##GQ176531|ATXN3|4287|ataxin 3##GQ176532|ATXN3|4287|ataxin 3##GQ176533|ATXN3|4287|ataxin 3##GQ176534|ATXN3|4287|ataxin 3##GQ176536|ATXN3|4287|ataxin 3##GQ176538|ATXN3|4287|ataxin 3##GQ176542|ATXN3|4287|ataxin 3##GQ176543|ATXN3|4287|ataxin 3##GQ176545|ATXN3|4287|ataxin 3##GQ176546|ATXN3|4287|ataxin 3##GQ176547|ATXN3|4287|ataxin 3##GQ176548|ATXN3|4287|ataxin 3##GQ176551|ATXN3|4287|ataxin 3##GQ176552|ATXN3|4287|ataxin 3##GQ176554|ATXN3|4287|ataxin 3##GQ176556|ATXN3|4287|ataxin 3##GQ176559|ATXN3|4287|ataxin 3##GQ176560|ATXN3|4287|ataxin 3##GQ176563|ATXN3|4287|ataxin 3##GQ176565|ATXN3|4287|ataxin 3##GQ176566|ATXN3|4287|ataxin 3##GQ176567|ATXN3|4287|ataxin 3##GQ176570|ATXN3|4287|ataxin 3##GQ176574|ATXN3|4287|ataxin 3##GQ176576|ATXN3|4287|ataxin 3##GQ176577|ATXN3|4287|ataxin 3##GQ176578|ATXN3|4287|ataxin 3##GQ176579|ATXN3|4287|ataxin 3##GQ176580|ATXN3|4287|ataxin 3##GQ176582|ATXN3|4287|ataxin 3##GQ176587|ATXN3|4287|ataxin 3##GQ176589|ATXN3|4287|ataxin 3##GQ176592|ATXN3|4287|ataxin 3##GQ176609|ATXN3|4287|ataxin 3##GQ176616|ATXN3|4287|ataxin 3##GQ176621|ATXN3|4287|ataxin 3##GQ176622|ATXN3|4287|ataxin 3##GQ176624|ATXN3|4287|ataxin 3##GQ176626|ATXN3|4287|ataxin 3##GQ176627|ATXN3|4287|ataxin 3##GQ176628|ATXN3|4287|ataxin 3##GQ176630|ATXN3|4287|ataxin 3##GQ176631|ATXN3|4287|ataxin 3##GQ176632|ATXN3|4287|ataxin 3##GQ176633|ATXN3|4287|ataxin 3##GQ176639|ATXN3|4287|ataxin 3##GQ176658|ATXN3|4287|ataxin 3##GQ176662|ATXN3|4287|ataxin 3##GQ176664|ATXN3|4287|ataxin 3##GQ176665|ATXN3|4287|ataxin 3##GQ176667|ATXN3|4287|ataxin 3##GQ176674|ATXN3|4287|ataxin 3##GQ176675|ATXN3|4287|ataxin 3##GQ176677|ATXN3|4287|ataxin 3##GQ176678|ATXN3|4287|ataxin 3##GQ176679|ATXN3|4287|ataxin 3##GQ176680|ATXN3|4287|ataxin 3##GQ176681|ATXN3|4287|ataxin 3##GQ176682|ATXN3|4287|ataxin 3##GQ176683|ATXN3|4287|ataxin 3##GQ176684|ATXN3|4287|ataxin 3##GQ176685|ATXN3|4287|ataxin 3##GQ176687|ATXN3|4287|ataxin 3##GQ176688|ATXN3|4287|ataxin 3##GQ176689|ATXN3|4287|ataxin 3##GQ176690|ATXN3|4287|ataxin 3##GQ176691|ATXN3|4287|ataxin 3##GQ176692|ATXN3|4287|ataxin 3##GQ176693|ATXN3|4287|ataxin 3##GQ176694|ATXN3|4287|ataxin 3##GQ176695|ATXN3|4287|ataxin 3##GQ176696|ATXN3|4287|ataxin 3##GQ176697|ATXN3|4287|ataxin 3##GQ176700|ATXN3|4287|ataxin 3##GQ176701|ATXN3|4287|ataxin 3##GQ176702|ATXN3|4287|ataxin 3##GQ176703|ATXN3|4287|ataxin 3##GQ176712|ATXN3|4287|ataxin 3##GQ176715|ATXN3|4287|ataxin 3##GQ176716|ATXN3|4287|ataxin 3##GQ176718|ATXN3|4287|ataxin 3##GQ176719|ATXN3|4287|ataxin 3##GQ176720|ATXN3|4287|ataxin 3##GQ176721|ATXN3|4287|ataxin 3##GQ176722|ATXN3|4287|ataxin 3##GQ176723|ATXN3|4287|ataxin 3##GQ176724|ATXN3|4287|ataxin 3##GQ176725|ATXN3|4287|ataxin 3##GQ176726|ATXN3|4287|ataxin 3##GQ176727|ATXN3|4287|ataxin 3##GQ176728|ATXN3|4287|ataxin 3##GQ176737|ATXN3|4287|ataxin 3##GQ176740|ATXN3|4287|ataxin 3##GQ176741|ATXN3|4287|ataxin 3##GQ176743|ATXN3|4287|ataxin 3##GQ176744|ATXN3|4287|ataxin 3##GQ176746|ATXN3|4287|ataxin 3##GQ176748|ATXN3|4287|ataxin 3##GQ176749|ATXN3|4287|ataxin 3##GQ176750|ATXN3|4287|ataxin 3##GQ176753|ATXN3|4287|ataxin 3##GQ176754|ATXN3|4287|ataxin 3##GQ176755|ATXN3|4287|ataxin 3##GQ176756|ATXN3|4287|ataxin 3##GQ176757|ATXN3|4287|ataxin 3##GQ176758|ATXN3|4287|ataxin 3##GQ176759|ATXN3|4287|ataxin 3##GQ176760|ATXN3|4287|ataxin 3##GQ176761|ATXN3|4287|ataxin 3##GQ176763|ATXN3|4287|ataxin 3##GQ176766|ATXN3|4287|ataxin 3##GQ176767|ATXN3|4287|ataxin 3##GQ176769|ATXN3|4287|ataxin 3##GQ176770|ATXN3|4287|ataxin 3##GQ176771|ATXN3|4287|ataxin 3##GQ176772|ATXN3|4287|ataxin 3##GQ176773|ATXN3|4287|ataxin 3##GQ176774|ATXN3|4287|ataxin 3##GQ176776|ATXN3|4287|ataxin 3##GQ176777|ATXN8|724066|ataxin 8##GQ176778|ATXN3|4287|ataxin 3##GQ176779|ATXN3|4287|ataxin 3##GQ176780|ATXN3|4287|ataxin 3##GQ176781|ATXN3|4287|ataxin 3##GQ176782|ATXN3|4287|ataxin 3##GQ176784|ATXN3|4287|ataxin 3##GQ176785|ATXN3|4287|ataxin 3##GQ176786|ATXN3|4287|ataxin 3##GQ176787|ATXN3|4287|ataxin 3##GQ176789|ATXN3|4287|ataxin 3##GQ176790|ATXN3|4287|ataxin 3##GQ176793|ATXN3|4287|ataxin 3##GQ176807|ATXN3|4287|ataxin 3##GQ176811|ATXN3|4287|ataxin 3##GQ176812|ATXN3|4287|ataxin 3##GQ176813|ATXN3|4287|ataxin 3##GQ176814|ATXN3|4287|ataxin 3##GQ176815|ATXN3|4287|ataxin 3##GQ176817|ATXN3|4287|ataxin 3##GQ176818|ATXN3|4287|ataxin 3##GQ176819|ATXN3|4287|ataxin 3##GQ176820|ATXN3|4287|ataxin 3##GQ176821|ATXN3|4287|ataxin 3##GQ176823|ATXN3|4287|ataxin 3##GQ176828|ATXN3|4287|ataxin 3##GQ176832|ATXN3|4287|ataxin 3##GQ176833|ATXN3|4287|ataxin 3##GQ176837|ATXN3|4287|ataxin 3##BC095402|ATXN3|4287|ataxin 3##AK307720|ATXN3|4287|ataxin 3##S75313|ATXN3|4287|ataxin 3##BC022245|ATXN3|4287|ataxin 3##AB050194|ATXN3|4287|ataxin 3##U64820|ATXN3|4287|ataxin 3##NM_001127696|ATXN3|4287|ataxin 3##NM_001127697|ATXN3|4287|ataxin 3##NM_001164774|ATXN3|4287|ataxin 3##NM_001164776|ATXN3|4287|ataxin 3##NM_001164777|ATXN3|4287|ataxin 3##NM_001164778|ATXN3|4287|ataxin 3##NM_001164779|ATXN3|4287|ataxin 3##NM_001164780|ATXN3|4287|ataxin 3##NM_001164781|ATXN3|4287|ataxin 3##NM_001164782|ATXN3|4287|ataxin 3##NM_004993|ATXN3|4287|ataxin 3##NM_030660|ATXN3|4287|ataxin 3	0.984264	CTCF.p2:11:0.984
chr7	151479981	151480075	reg1007687.p1	5.791	+	TSC_hg19_v1_chr7_-_151329284 BT007127 BC020540 AB025580 AF087875 AK314646 AK001887 NM_024429	-150748	-	TSC_hg19_v1_chr7_-_151216982 BC107705 AK125446 BC016155 NM_005614	-263043	-	TSC_hg19_v1_chr7_-_151216769 BC066307	-263259	-	BC068598 TSC_hg19_v1_chr7_-_151511929 NM_001040633	31912	-	AK074675 NM_016203	94234	-	NM_145292 AF440404 AK315667 AK093091 AX747915 BC022021 AF440400 BC025391	173470	+	BT007127|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC020540|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AB025580|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AF087875|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK314646|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK001887|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_024429|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC107705|RHEB|6009|Ras homolog enriched in brain##AK125446|RHEB|6009|Ras homolog enriched in brain##BC016155|RHEB|6009|Ras homolog enriched in brain##NM_005614|RHEB|6009|Ras homolog enriched in brain##BC066307|RHEB|6009|Ras homolog enriched in brain##BC068598|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_001040633|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK074675|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_016203|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_145292|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440404|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK315667|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK093091|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC022021|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440400|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC025391|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	0.61325	CTCF.p2:28:0.613
chr8	144650884	144651047	reg1024234.p2	5.791	+	TSC_hg19_v1_chr8_-_144650884 AF289596	-62	-	NM_024736 AY008304 BC008904 TSC_hg19_v1_chr8_+_144640515 AK303615 AK022212 AK123985 AK096216 BC069000	-10459	+	AK291817 NM_001166237	-15409	+	TSC_hg19_v1_chr8_-_144651064 AK292180	90	-	TSC_hg19_v1_chr8_-_144654943 NM_001100878	3968	-	CU675331 CU680822 TSC_hg19_v1_chr8_-_144660501 BC006284 BC014190	9493	-	AF289596|C8orf73|642475|chromosome 8 open reading frame 73##NM_024736|GSDMD|79792|gasdermin D##AY008304|GSDMD|79792|gasdermin D##BC008904|GSDMD|79792|gasdermin D##AK303615|GSDMD|79792|gasdermin D##AK022212|GSDMD|79792|gasdermin D##AK123985|GSDMD|79792|gasdermin D##AK096216|GSDMD|79792|gasdermin D##BC069000|GSDMD|79792|gasdermin D##AK291817|GSDMD|79792|gasdermin D##NM_001166237|GSDMD|79792|gasdermin D##AK292180|C8orf73|642475|chromosome 8 open reading frame 73##NM_001100878|C8orf73|642475|chromosome 8 open reading frame 73##BC006284|NAPRT1|93100|nicotinate phosphoribosyltransferase domain containing 1##BC014190|NAPRT1|93100|nicotinate phosphoribosyltransferase domain containing 1	0.110661	
chr11	65239686	65239867	reg1014111.p4	5.790	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	-46253	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	-47376	+	TSC_hg19_v1_chr11_+_65190274 AK026198	-49498	+	TSC_hg19_v1_chr11_+_65265158 EF177381	25427	+	TSC_hg19_v1_chr11_+_65266515 BC025986 BX538238 FJ209305	26725	+	TSC_hg19_v1_chr11_+_65266869 BC104662	27023	+	AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##EF177381|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BC025986|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BX538238|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)	0.0	
chr16	13960133	13960240	reg1024584.p1	5.790	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-964718	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-1062467	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-1062535	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	53845	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	204900	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	320332	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.992596	CTCF.p2:-12:0.993
chr7	137782222	137782336	reg1023843.p1	5.790	+	AK298421 NM_001190906 NM_001190907 NM_005989 Z28339 AK298428 BC130625 BC130627 AK289425 HQ258384	-21061	+	TSC_hg19_v1_chr7_-_137686833 NM_001253775 NM_194071	-95427	-	AK131517 TSC_hg19_v1_chr7_-_137686812	-95467	-	TSC_hg19_v1_chr7_+_138145003 AK312610 AK075306 NM_003852 NM_015905 AK302679	362713	+	AF119042 BC028689 TSC_hg19_v1_chr7_+_138145183 AB528587 AF009353	362957	+	BC036796 NM_174959	566689	-	AK298421|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190906|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190907|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_005989|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##Z28339|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK298428|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130625|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130627|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK289425|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##HQ258384|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001253775|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_194071|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK131517|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK312610|TRIM24|8805|tripartite motif containing 24##AK075306|TRIM24|8805|tripartite motif containing 24##NM_003852|TRIM24|8805|tripartite motif containing 24##NM_015905|TRIM24|8805|tripartite motif containing 24##AK302679|TRIM24|8805|tripartite motif containing 24##AF119042|TRIM24|8805|tripartite motif containing 24##BC028689|TRIM24|8805|tripartite motif containing 24##AF009353|TRIM24|8805|tripartite motif containing 24##BC036796|SVOPL|136306|SVOP-like##NM_174959|SVOPL|136306|SVOP-like	0.750101	CTCF.p2:4:0.750
chr10	54709839	54709951	reg1024130.p1	5.789	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-178469	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-635780	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-1250548	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	1851103	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	2648879	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	3411119	-	AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor	0.360657	CTCF.p2:-33:0.232
chr1	228354200	228354343	reg1024874.p1	5.789	+	TSC_hg19_v1_chr1_+_228353834 AK022796	-410	+	NM_001010867 TSC_hg19_v1_chr1_+_228353504 BC028052	-799	+	BC089439 NM_020435	-16857	+	TSC_hg19_v1_chr1_+_228395744 NM_001098623 NM_052843	41529	+	TSC_hg19_v1_chr1_-_228401360 BC027909 AK056556	47088	-	TSC_hg19_v1_chr1_-_228463735 AK294019	109476	-	AK022796|IBA57|200205|IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)##NM_001010867|IBA57|200205|IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)##BC028052|IBA57|200205|IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)##BC089439|GJC2|57165|gap junction protein, gamma 2, 47kDa##NM_020435|GJC2|57165|gap junction protein, gamma 2, 47kDa##NM_001098623|OBSCN|84033|obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF##NM_052843|OBSCN|84033|obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF##BC027909|C1orf145|574407|chromosome 1 open reading frame 145##AK056556|C1orf145|574407|chromosome 1 open reading frame 145	0.272801	
chr13	47254068	47254221	reg1019573.p2	5.789	+	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-126637	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-126724	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	-126821	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	117171	-	AK314132 BX647777 AK302787 NM_000621 NM_001165947	216923	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1321307	-	HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.0	
chr20	33296457	33296547	reg1025748.p1	5.789	+	TSC_hg19_v1_chr20_+_33292147 AY422170 NM_021202 AJ297792 AK292443 BC035639	-4299	+	AY422169 NM_080476	-31414	-	AK301900 AY339061 BC030512 EU831773 EU831851 TSC_hg19_v1_chr20_-_33264897 AB086842 AK308627 AK075507 AY358816	-31592	-	AK027153 AK025412 TSC_hg19_v1_chr20_+_33299500	2908	+	AL122050 TSC_hg19_v1_chr20_+_33299806	3291	+	TSC_hg19_v1_chr20_-_33413434 BC069829 BC035676 NM_001242539 NM_014071 BC047886	116912	-	AY422170|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##NM_021202|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AJ297792|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AK292443|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##BC035639|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AY422169|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##NM_080476|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AK301900|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AY339061|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##BC030512|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##EU831773|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##EU831851|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AB086842|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AK308627|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AK075507|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AY358816|PIGU|128869|phosphatidylinositol glycan anchor biosynthesis, class U##AK027153|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AK025412|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AL122050|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##BC069829|NCOA6|23054|nuclear receptor coactivator 6##BC035676|NCOA6|23054|nuclear receptor coactivator 6##NM_001242539|NCOA6|23054|nuclear receptor coactivator 6##NM_014071|NCOA6|23054|nuclear receptor coactivator 6##BC047886|NCOA6|23054|nuclear receptor coactivator 6	0.022052	
chr20	5383670	5383779	reg1022612.p2	5.789	+	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-88688	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-276029	+	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	-276202	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	207863	-	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	347342	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	508402	+	AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)	0.998032	CTCF.p2:12:0.998
chr22	43298302	43298417	reg1024296.p1	5.789	+	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-45004	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	-45089	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	-45148	-	BC008037 NM_007229	44687	-	AL136845 NM_001184971	57527	-	TSC_hg19_v1_chr22_-_43411136 AF128536	112780	-	NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	0.977477	CTCF.p2:11:0.977
chr3	139995644	139995738	reg1025773.p2	5.789	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-341439	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-341673	+	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	-598863	-	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	401268	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	665076	+	TSC_hg19_v1_chr3_+_140770412 BC051354	774787	+	AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.965022	CTCF.p2:2:0.950
chr3	183602669	183602812	reg1024611.p1	5.789	+	TSC_hg19_v1_chr3_-_183602690 NM_001037639 NM_018622	-32	-	TSC_hg19_v1_chr3_-_183602669 BC003653	-62	-	TSC_hg19_v1_chr3_-_183602663 AK024765	-78	-	TSC_hg19_v1_chr3_-_183735673 BC142670 BC142719 U83661 AF104942 AY754874 AY754875 AY754876 AB209454 BC051358 NM_001023587 NM_005688	132951	-	AY159812 NM_182537	146591	+	NM_001145143	146789	+	NM_001037639|PARL|55486|presenilin associated, rhomboid-like##NM_018622|PARL|55486|presenilin associated, rhomboid-like##BC003653|PARL|55486|presenilin associated, rhomboid-like##AK024765|PARL|55486|presenilin associated, rhomboid-like##BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY159812|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D##NM_182537|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D##NM_001145143|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D	0.0	
chr11	33879747	33879927	reg1000019.p2	5.788	+	AB209039 AF176702 TSC_hg19_v1_chr11_-_33796067 AF174595 CU692298 EU832324 EU832409 AL136625 BC046110 AK001943 AK128454 AK304866 BC039291 NM_012175 NM_033406	-83845	-	TSC_hg19_v1_chr11_-_33757970 M27909 AK311778 X16447 X17198 NM_000611 NM_203329 NM_203330 NM_203331	-121889	-	NM_001127227	-135340	-	AB463835 CU692080 DQ892333 DQ895538 BC073973 TSC_hg19_v1_chr11_-_33891132	11205	-	BC035607 TSC_hg19_v1_chr11_-_33891285	11435	-	BC042426 TSC_hg19_v1_chr11_-_33891402 BC034041 NM_001142316	11554	-	AB209039|FBXO3|26273|F-box protein 3##AF176702|FBXO3|26273|F-box protein 3##AF174595|FBXO3|26273|F-box protein 3##EU832324|FBXO3|26273|F-box protein 3##EU832409|FBXO3|26273|F-box protein 3##AL136625|FBXO3|26273|F-box protein 3##BC046110|FBXO3|26273|F-box protein 3##AK001943|FBXO3|26273|F-box protein 3##AK128454|FBXO3|26273|F-box protein 3##AK304866|FBXO3|26273|F-box protein 3##BC039291|FBXO3|26273|F-box protein 3##NM_012175|FBXO3|26273|F-box protein 3##NM_033406|FBXO3|26273|F-box protein 3##M27909|CD59|966|CD59 molecule, complement regulatory protein##AK311778|CD59|966|CD59 molecule, complement regulatory protein##X16447|CD59|966|CD59 molecule, complement regulatory protein##X17198|CD59|966|CD59 molecule, complement regulatory protein##NM_000611|CD59|966|CD59 molecule, complement regulatory protein##NM_203329|CD59|966|CD59 molecule, complement regulatory protein##NM_203330|CD59|966|CD59 molecule, complement regulatory protein##NM_203331|CD59|966|CD59 molecule, complement regulatory protein##NM_001127227|CD59|966|CD59 molecule, complement regulatory protein##DQ892333|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##DQ895538|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC073973|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC035607|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC042426|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC034041|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142316|LMO2|4005|LIM domain only 2 (rhombotin-like 1)	0.0	
chr3	172341168	172341280	reg1025260.p1	5.788	+	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	-100046	-	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	-175001	-	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-582887	+	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	87666	-	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	127300	+	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	131078	+	AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene	0.994973	CTCF.p2:-10:0.995
chr4	86469402	86469554	reg1026284.p1	5.788	+	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	-73135	+	NM_014991	-581935	-	NM_001263 U65887	-965385	+	TSC_hg19_v1_chr4_+_86699850 NM_001042669	230370	+	BC098580 TSC_hg19_v1_chr4_+_86699865 AK098193	230420	+	AK307423 TSC_hg19_v1_chr4_+_86749064	279576	+	NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24##BC098580|ARHGAP24|83478|Rho GTPase activating protein 24##AK098193|ARHGAP24|83478|Rho GTPase activating protein 24##AK307423|ARHGAP24|83478|Rho GTPase activating protein 24	0.0	
chr8	130832474	130832576	reg1023485.p1	5.788	+	AB042405 NM_031415	-33392	-	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-2025742	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-2084035	+	BC003599 TSC_hg19_v1_chr8_-_130951934	119390	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	119481	-	BC016345 TSC_hg19_v1_chr8_-_131028667	196134	-	AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B	0.525052	CTCF.p2:0:0.525
chr8	29208032	29208213	reg1025624.p1	5.788	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-52	-	AL137704 NM_057158	-1801	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-87508	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	732352	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	732450	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	744821	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chr9	84302114	84302207	reg1023376.p2	5.788	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	-2114475	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	-2114636	+	TSC_hg19_v1_chr9_+_82186879 NM_007005	-2115274	+	BC010100 NM_005077	1435	-	TSC_hg19_v1_chr9_-_84304463 AB209854	2267	-	NM_001145197 AK125847 AK308327	241211	+	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC010100|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_005077|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##AB209854|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4##AK125847|FAM75D4|389761|family with sequence similarity 75, member D4##AK308327|FAM75D4|389761|family with sequence similarity 75, member D4	0.0	
chr9	87267716	87267825	reg1025490.p1	5.788	+	AF305210 NM_022127	-284358	-	BC093821 BC093823 AK310861 AK304406 AK314039 AK292849 NM_001199633	-312136	-	NM_024945 TSC_hg19_v1_chr9_+_86595689 BC039999 BC020606 AK022950 BC044571 BC053549 BC032494	-672061	+	TSC_hg19_v1_chr9_+_87283453 BC075804 NM_001018064 NM_006180 AB209118	15691	+	TSC_hg19_v1_chr9_+_87284577 NM_001018065 NM_001018066	16813	+	NM_001007097 TSC_hg19_v1_chr9_+_87284627	16856	+	AF305210|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_022127|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093821|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093823|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK310861|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK304406|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK314039|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK292849|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_001199633|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_024945|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC039999|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC020606|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##AK022950|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC044571|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC053549|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC032494|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC075804|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018064|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_006180|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB209118|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018065|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018066|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001007097|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	0.849839	CTCF.p2:-12:0.850
chrUn_gl000217	108694	108838	reg1025311.p1	5.788	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.843859	CTCF.p2:31:0.829
chrX	102206617	102206764	reg1014802.p2	5.788	+	BC101169 BC101170 BC101171 BC101172 NM_001031834	-14491	+	TSC_hg19_v1_chrX_+_102024107 BC040959	-182608	+	NM_001142529 NM_001142530	-205784	+	AF220189 AY833561 TSC_hg19_v1_chrX_-_102319085	112392	-	TSC_hg19_v1_chrX_-_102319100 AF237783 AK290958 NM_018476	112441	-	CU689204 DQ891319 DQ894503 BC031616 AF346619 AJ277527 NM_022052 AK302447 TSC_hg19_v1_chrX_-_102348072 AK302586	141363	-	BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like##NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC040959|LOC100287765|100287765|uncharacterized LOC100287765##NM_001142529|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142530|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##AF220189|BEX1|55859|brain expressed, X-linked 1##AY833561|BEX1|55859|brain expressed, X-linked 1##AF237783|BEX1|55859|brain expressed, X-linked 1##AK290958|BEX1|55859|brain expressed, X-linked 1##NM_018476|BEX1|55859|brain expressed, X-linked 1##DQ891319|NXF3|56000|nuclear RNA export factor 3##DQ894503|NXF3|56000|nuclear RNA export factor 3##BC031616|NXF3|56000|nuclear RNA export factor 3##AF346619|NXF3|56000|nuclear RNA export factor 3##AJ277527|NXF3|56000|nuclear RNA export factor 3##NM_022052|NXF3|56000|nuclear RNA export factor 3##AK302447|NXF3|56000|nuclear RNA export factor 3##AK302586|NXF3|56000|nuclear RNA export factor 3	0.946408	CTCF.p2:-5:0.946
chr10	72302405	72302526	reg1028562.p1	5.787	+	TSC_hg19_v1_chr10_+_72238575 NM_014431 AB033100 BC136375 BC136376	-63850	+	TSC_hg19_v1_chr10_-_72201438 BC104976 NM_018055 BC112025	-101014	-	BC033585 TSC_hg19_v1_chr10_-_72201372	-101099	-	BC047695 TSC_hg19_v1_chr10_-_72362497 AK312754	60004	-	BC063043 TSC_hg19_v1_chr10_-_72362518 FJ555237 NM_001083116 NM_005041	60061	-	AB462932 AF358666 AJ345098 NM_080722 NM_139155	130092	+	NM_014431|KIAA1274|27143|KIAA1274##AB033100|KIAA1274|27143|KIAA1274##BC136375|KIAA1274|27143|KIAA1274##BC136376|KIAA1274|27143|KIAA1274##BC104976|NODAL|4838|nodal homolog (mouse)##NM_018055|NODAL|4838|nodal homolog (mouse)##BC112025|NODAL|4838|nodal homolog (mouse)##BC033585|NODAL|4838|nodal homolog (mouse)##BC047695|PRF1|5551|perforin 1 (pore forming protein)##AK312754|PRF1|5551|perforin 1 (pore forming protein)##BC063043|PRF1|5551|perforin 1 (pore forming protein)##FJ555237|PRF1|5551|perforin 1 (pore forming protein)##NM_001083116|PRF1|5551|perforin 1 (pore forming protein)##NM_005041|PRF1|5551|perforin 1 (pore forming protein)##AF358666|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##AJ345098|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_080722|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_139155|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14	0.480898	CTCF.p2:-5:0.481
chr1	162327595	162327707	reg1023591.p1	5.787	+	TSC_hg19_v1_chr1_+_162039485 BC041382 AB007933 NM_001164757 NM_014697	-288127	+	AK316154 BC067274 NM_015441 TSC_hg19_v1_chr1_-_161993687	-334015	-	TSC_hg19_v1_chr1_+_161736145 BC014969 BC071997 AB208929 CU677145	-591515	+	AY841899 NM_001126060	5121	+	AB463503 CU689584 AY248900 BC032957 NM_182581	18960	-	AK293907 NM_001135240	21044	+	BC041382|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AB007933|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_001164757|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_014697|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AK316154|OLFML2B|25903|olfactomedin-like 2B##BC067274|OLFML2B|25903|olfactomedin-like 2B##NM_015441|OLFML2B|25903|olfactomedin-like 2B##BC014969|ATF6|22926|activating transcription factor 6##BC071997|ATF6|22926|activating transcription factor 6##AB208929|ATF6|22926|activating transcription factor 6##AY841899|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_001126060|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AY248900|C1orf111|284680|chromosome 1 open reading frame 111##BC032957|C1orf111|284680|chromosome 1 open reading frame 111##NM_182581|C1orf111|284680|chromosome 1 open reading frame 111##AK293907|C1orf226|400793|chromosome 1 open reading frame 226##NM_001135240|C1orf226|400793|chromosome 1 open reading frame 226	0.029693	
chr12	6717055	6717235	reg1025435.p1	5.787	+	AK128741 NM_001273 TSC_hg19_v1_chr12_-_6716562	-589	-	X86691 TSC_hg19_v1_chr12_-_6716523 BC014964 BC025962 BC038596	-644	-	CR936680 EU446505 TSC_hg19_v1_chr12_-_6715604	-1577	-	NM_001142961 TSC_hg19_v1_chr12_-_6740816	23670	-	BC033571 TSC_hg19_v1_chr12_-_6745131 AK313127 BC072394 NM_020400	28046	-	DQ890872 DQ894028 TSC_hg19_v1_chr12_-_6756578 AK302290 AK311572 BC033010 AB051833 NM_032489	39419	-	AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4##NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4##X86691|CHD4|1108|chromodomain helicase DNA binding protein 4##BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4##BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4##BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4##CR936680|CHD4|1108|chromodomain helicase DNA binding protein 4##EU446505|CHD4|1108|chromodomain helicase DNA binding protein 4##NM_001142961|LPAR5|57121|lysophosphatidic acid receptor 5##BC033571|LPAR5|57121|lysophosphatidic acid receptor 5##AK313127|LPAR5|57121|lysophosphatidic acid receptor 5##BC072394|LPAR5|57121|lysophosphatidic acid receptor 5##NM_020400|LPAR5|57121|lysophosphatidic acid receptor 5##DQ890872|ACRBP|84519|acrosin binding protein##DQ894028|ACRBP|84519|acrosin binding protein##AK302290|ACRBP|84519|acrosin binding protein##AK311572|ACRBP|84519|acrosin binding protein##BC033010|ACRBP|84519|acrosin binding protein##AB051833|ACRBP|84519|acrosin binding protein##NM_032489|ACRBP|84519|acrosin binding protein	0.0	
chr3	122747301	122747376	reg1001196.p1	5.787	+	TSC_hg19_v1_chr3_-_122746605 AK309848	-730	-	TSC_hg19_v1_chr3_-_122746576 AK291407 NM_001031702	-764	-	AK309834 TSC_hg19_v1_chr3_-_122746553 AK294528	-787	-	NM_006810 TSC_hg19_v1_chr3_+_122785922 BC001625 D49490	38580	+	NM_012430 TSC_hg19_v1_chr3_+_122920787 AK315771 AF100749	173452	+	AK303070 NM_001199642	387850	-	AK309848|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK291407|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##NM_001031702|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK309834|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK294528|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##NM_006810|PDIA5|10954|protein disulfide isomerase family A, member 5##BC001625|PDIA5|10954|protein disulfide isomerase family A, member 5##D49490|PDIA5|10954|protein disulfide isomerase family A, member 5##NM_012430|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK315771|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AF100749|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK303070|ADCY5|111|adenylate cyclase 5##NM_001199642|ADCY5|111|adenylate cyclase 5	0.0	
chr3	152226633	152226754	reg1021905.p1	5.787	+	AY358260 NM_001123228	-167915	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-209500	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	-239348	-	NM_002563 Z49205	326042	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	653333	+	TSC_hg19_v1_chr3_+_152880058 BC012362	653355	+	AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family	1.132585	CTCF.p2:-32:0.808	CTCF.p2:37:0.277
chr4	69891093	69891186	reg1024112.p1	5.787	+	NM_001075 NM_001144767	-5027	-	HQ258456 BC130533 AY358727 AY542891 NM_024743	-73646	-	TSC_hg19_v1_chr4_+_69681710 BC113649 AK222839 AK222872 AK292738 AK298432 NM_001075 NM_001144767 X63359	-209421	+	AK313190 TSC_hg19_v1_chr4_+_69962191 BC030974 NM_001074 BC107727 AK223142 J05428 DQ893657 DQ895814	71075	+	AF016492 BC069441 BC107059 BC107060 NM_001073 AK222839 AK222872 AK292738 AK298432 BC113649	189318	-	AF177272 AF177273 AF177274 NM_001207004 NM_053039 AB451456	255078	+	NM_001075|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##NM_001144767|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##HQ258456|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##BC130533|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##AY358727|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##AY542891|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##NM_024743|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##BC113649|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK222839|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK222872|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK292738|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK298432|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##NM_001075|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##NM_001144767|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK313190|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##BC030974|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##NM_001074|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##AK223142|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##J05428|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##DQ893657|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##DQ895814|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##AF016492|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC069441|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC107059|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC107060|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##NM_001073|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##AK222839|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK222872|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK292738|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK298432|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##BC113649|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AF177272|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF177273|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF177274|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##NM_001207004|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##NM_053039|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AB451456|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28	0.019275	
chr2	87175207	87175339	reg1025758.p1	5.786	+	CR749330 NM_001024457	-30536	+	TSC_hg19_v1_chr2_+_87140905 AK302429 NM_001078170	-34354	+	X13452 AK303360 M36712 Y00805 BC100911 BC100912 BC100913 BC100914 X13444 X13445 X13446 NM_001178100 NM_004931 NM_172101 NM_172102 NM_172213	-86254	-	BC107767 BC109248 BC070296 BC005379 NM_001032392 M93143 NM_002665 BC022294	73685	-	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	128059	-	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	579744	+	CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##AK302429|RGPD2|729857|RANBP2-like and GRIP domain containing 2##NM_001078170|RGPD2|729857|RANBP2-like and GRIP domain containing 2##X13452|CD8B|926|CD8b molecule##AK303360|CD8B|926|CD8b molecule##M36712|CD8B|926|CD8b molecule##Y00805|CD8B|926|CD8b molecule##BC100911|CD8B|926|CD8b molecule##BC100912|CD8B|926|CD8b molecule##BC100913|CD8B|926|CD8b molecule##BC100914|CD8B|926|CD8b molecule##X13444|CD8B|926|CD8b molecule##X13445|CD8B|926|CD8b molecule##X13446|CD8B|926|CD8b molecule##NM_001178100|CD8B|926|CD8b molecule##NM_004931|CD8B|926|CD8b molecule##NM_172101|CD8B|926|CD8b molecule##NM_172102|CD8B|926|CD8b molecule##NM_172213|CD8B|926|CD8b molecule##BC107767|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC022294|PLGLB2|5342|plasminogen-like B2##BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152	0.578776	CTCF.p2:-2:0.579
chr3	188759428	188759547	reg1022660.p2	5.786	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-94517	+	NM_001167671 BC130584 BC144076	-816253	+	NM_005578 U49957	-828767	+	AK125682 NM_198485 BC101550 BC101552	130324	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	589772	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	748031	+	AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma##U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63	0.976808	CTCF.p2:-9:0.977
chr8	41573904	41574084	reg1021996.p2	5.786	+	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	-51231	-	AB587362 AK057898 NM_152568	-69119	-	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	-138300	+	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	81146	-	AK026601 TSC_hg19_v1_chr8_+_41685847	111831	+	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	180316	-	AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic	0.0	
chr5	114139169	114139283	reg1026534.p1	5.785	+	BC015371 NM_170775 BC040722	-369977	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	-440765	+	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	-441177	+	TSC_hg19_v1_chr5_-_114505606 AK316422 AK296389	366378	-	AB196558 AJ272269 BC130334 AK125426 BC045164 BC046096 NM_001017397 NM_001017398 NM_018700	376761	-	AY780790 AB590094 TSC_hg19_v1_chr5_-_114598563 NM_005023	459340	-	BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK316422|TRIM36|55521|tripartite motif containing 36##AK296389|TRIM36|55521|tripartite motif containing 36##AB196558|TRIM36|55521|tripartite motif containing 36##AJ272269|TRIM36|55521|tripartite motif containing 36##BC130334|TRIM36|55521|tripartite motif containing 36##AK125426|TRIM36|55521|tripartite motif containing 36##BC045164|TRIM36|55521|tripartite motif containing 36##BC046096|TRIM36|55521|tripartite motif containing 36##NM_001017397|TRIM36|55521|tripartite motif containing 36##NM_001017398|TRIM36|55521|tripartite motif containing 36##NM_018700|TRIM36|55521|tripartite motif containing 36##AY780790|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##NM_005023|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit	0.385737	CTCF.p2:-8:0.386
chr16	49218020	49218151	reg1026217.p1	5.784	+	BC051897 TSC_hg19_v1_chr16_-_48644092 AB014515 BC152472 NM_153029	-573969	-	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	-798833	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	-818294	-	AB527638 TSC_hg19_v1_chr16_-_49315397	97308	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	97415	-	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	97649	-	BC051897|N4BP1|9683|NEDD4 binding protein 1##AB014515|N4BP1|9683|NEDD4 binding protein 1##BC152472|N4BP1|9683|NEDD4 binding protein 1##NM_153029|N4BP1|9683|NEDD4 binding protein 1##BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor	0.010537	
chr12	121498479	121498627	reg1022287.p3	5.783	+	TSC_hg19_v1_chr12_-_121476781 HQ258301 AJ225089 AK314419 NM_003733 NM_198213 AK023956 BC117408 BC117410	-21770	-	TSC_hg19_v1_chr12_-_121454291 AK222630 AK299170 AK301566 AK022510 AK225162 NM_022895 AK307971	-44259	-	TSC_hg19_v1_chr12_-_121454230 BC014661	-44309	-	NM_002562 TSC_hg19_v1_chr12_+_121570744 AK294126 AK290405 AK296432 BC011913 BC121157 BC121158 AB209709 BC007679 AK090866 AK225163 AX746656 Y09561 GQ180122 DQ893457 DQ896337 AB590390 CU680114 AY847298 AY847299 AY847300 AY847301 AY847302 AY847303 AY847304 DQ399293	72148	+	U83993 NM_002560	149108	+	TSC_hg19_v1_chr12_+_121647931 AK293599 AK293660 AK297704 AK308549 AK308868 BC017458	149339	+	HQ258301|OASL|8638|2'-5'-oligoadenylate synthetase-like##AJ225089|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK314419|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_003733|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_198213|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK023956|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117408|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117410|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK222630|C12orf43|64897|chromosome 12 open reading frame 43##AK299170|C12orf43|64897|chromosome 12 open reading frame 43##AK301566|C12orf43|64897|chromosome 12 open reading frame 43##AK022510|C12orf43|64897|chromosome 12 open reading frame 43##AK225162|C12orf43|64897|chromosome 12 open reading frame 43##NM_022895|C12orf43|64897|chromosome 12 open reading frame 43##AK307971|C12orf43|64897|chromosome 12 open reading frame 43##BC014661|C12orf43|64897|chromosome 12 open reading frame 43##NM_002562|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK294126|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK290405|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK296432|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC011913|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121157|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121158|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AB209709|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC007679|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK090866|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK225163|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##Y09561|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##GQ180122|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ893457|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ896337|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847298|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847299|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847300|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847301|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847302|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847303|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847304|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ399293|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##U83993|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##NM_002560|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293599|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293660|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK297704|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308549|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308868|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC017458|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4	0.06483	
chr18	77399530	77399632	reg1025099.p1	5.783	+	BC045628 TSC_hg19_v1_chr18_+_77253425	-146201	+	TSC_hg19_v1_chr18_+_77160328 NM_172387 NM_172389 U59736 AK293760 U80918 X99829 EU887560 EU887562 EU887564 EU887566	-239264	+	TSC_hg19_v1_chr18_+_77155967 U08015 BC104753 BC112243 BC143457 EU887559 EU887561 EU887563 EU887565	-243486	+	TSC_hg19_v1_chr18_-_77439359 AK002023	39732	-	TSC_hg19_v1_chr18_-_77439740 AK098581	40160	-	TSC_hg19_v1_chr18_+_77439801 BC047999 NM_004715 NM_048368	40220	+	BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172387|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172389|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U59736|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK293760|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80918|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887560|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887562|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887564|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887566|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U08015|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC104753|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC112243|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC143457|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887559|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887561|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887563|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887565|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK098581|FLJ25715|284241|uncharacterized protein FLJ25715##BC047999|CTDP1|9150|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1##NM_004715|CTDP1|9150|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1##NM_048368|CTDP1|9150|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	0.0	
chr3	98315870	98316020	reg1026663.p1	5.783	+	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	-3526	-	AK313375 BC101779 BC101781 BC069437 CU686810 NM_005290	-65136	+	TSC_hg19_v1_chr3_-_98241835 NM_001040181 NM_001040182 NM_001040183 NM_001040199 NM_001040200 NM_019895	-74079	-	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	135300	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	135642	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	304547	-	AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AK313375|GPR15|2838|G protein-coupled receptor 15##BC101779|GPR15|2838|G protein-coupled receptor 15##BC101781|GPR15|2838|G protein-coupled receptor 15##BC069437|GPR15|2838|G protein-coupled receptor 15##NM_005290|GPR15|2838|G protein-coupled receptor 15##NM_001040181|CLDND1|56650|claudin domain containing 1##NM_001040182|CLDND1|56650|claudin domain containing 1##NM_001040183|CLDND1|56650|claudin domain containing 1##NM_001040199|CLDND1|56650|claudin domain containing 1##NM_001040200|CLDND1|56650|claudin domain containing 1##NM_019895|CLDND1|56650|claudin domain containing 1##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2	0.897492	CTCF.p2:1:0.897
chr11	3497644	3497764	reg1024942.p2	5.782	+	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	-97325	-	AK293940 NM_001039165	-244089	-	AB529240 AY255583 NM_001164377	-257662	-	NM_053017 NM_001079536 Y16835	165810	-	BC017828 BC069102 NM_004314 S74683 BC111729	168666	+	AB528800 AJ278118 AJ295237 BC136250 BC143303 AF199235 NM_020402	194874	-	BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195##AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##NM_053017|ART5|116969|ADP-ribosyltransferase 5##NM_001079536|ART5|116969|ADP-ribosyltransferase 5##Y16835|ART5|116969|ADP-ribosyltransferase 5##BC017828|ART1|417|ADP-ribosyltransferase 1##BC069102|ART1|417|ADP-ribosyltransferase 1##NM_004314|ART1|417|ADP-ribosyltransferase 1##S74683|ART1|417|ADP-ribosyltransferase 1##BC111729|ART1|417|ADP-ribosyltransferase 1##AJ278118|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AJ295237|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC136250|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC143303|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AF199235|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##NM_020402|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10	0.0	
chr12	1743906	1744011	reg1023283.p1	5.782	+	BC001749 NM_032642	-5547	+	AY009399 NM_030775	-17737	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	-40607	-	AK127196 TSC_hg19_v1_chr12_+_1800187	56208	+	TSC_hg19_v1_chr12_+_1800235 AK128511 AK127111 BC051858 NM_024551	56259	+	BC048288 TSC_hg19_v1_chr12_-_1920907 AK301234	176966	-	BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AK127196|ADIPOR2|79602|adiponectin receptor 2##AK128511|ADIPOR2|79602|adiponectin receptor 2##BC051858|ADIPOR2|79602|adiponectin receptor 2##NM_024551|ADIPOR2|79602|adiponectin receptor 2##BC048288|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##AK301234|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4	0.998114	CTCF.p2:-7:0.998
chr17	1986929	1987099	reg1022610.p1	5.782	+	DQ187313 NM_001098202	-27457	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-28616	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-41706	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	219798	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	220026	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	220238	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.0	
chr17	55675277	55675410	reg1024147.p1	5.782	+	AK093888 AX748353 NM_170721	-340970	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-341370	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-512200	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	252061	-	AK000746 NM_017949	305406	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	357333	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.999503	CTCF.p2:27:1.000
chr8	110328503	110328619	reg1028101.p1	5.782	+	BC105045 BC113360 NM_003301 X72089 D16845 AY493373 HQ258206 X75071	-228865	+	AK055230 NM_153015 BC033057 BC030710	-528755	-	TSC_hg19_v1_chr8_+_109455874 AK290974 D14659 AB384437 CR457402 CU676696 CU692380 HQ447150	-872681	+	AF283302 AK311583 AF521133 NM_001128211 AK307663	13573	-	AK301278 TSC_hg19_v1_chr8_-_110346317 BC000967 AK027897 BC043406 AK315006 BC031258 NM_032869 AF283301	17810	-	TSC_hg19_v1_chr8_+_110346575 NM_001193557 NM_020189 AK095651 AK316560 AK000487 AK290752 BC051878 BC007870	18032	+	BC105045|TRHR|7201|thyrotropin-releasing hormone receptor##BC113360|TRHR|7201|thyrotropin-releasing hormone receptor##NM_003301|TRHR|7201|thyrotropin-releasing hormone receptor##X72089|TRHR|7201|thyrotropin-releasing hormone receptor##D16845|TRHR|7201|thyrotropin-releasing hormone receptor##AY493373|TRHR|7201|thyrotropin-releasing hormone receptor##HQ258206|TRHR|7201|thyrotropin-releasing hormone receptor##X75071|TRHR|7201|thyrotropin-releasing hormone receptor##AK055230|TMEM74|157753|transmembrane protein 74##NM_153015|TMEM74|157753|transmembrane protein 74##BC030710|TMEM74|157753|transmembrane protein 74##AK290974|TTC35|9694|tetratricopeptide repeat domain 35##D14659|TTC35|9694|tetratricopeptide repeat domain 35##CR457402|TTC35|9694|tetratricopeptide repeat domain 35##HQ447150|TTC35|9694|tetratricopeptide repeat domain 35##AF283302|NUDCD1|84955|NudC domain containing 1##AK311583|NUDCD1|84955|NudC domain containing 1##AF521133|NUDCD1|84955|NudC domain containing 1##NM_001128211|NUDCD1|84955|NudC domain containing 1##AK307663|NUDCD1|84955|NudC domain containing 1##AK301278|NUDCD1|84955|NudC domain containing 1##BC000967|NUDCD1|84955|NudC domain containing 1##AK027897|NUDCD1|84955|NudC domain containing 1##BC043406|NUDCD1|84955|NudC domain containing 1##AK315006|NUDCD1|84955|NudC domain containing 1##BC031258|NUDCD1|84955|NudC domain containing 1##NM_032869|NUDCD1|84955|NudC domain containing 1##AF283301|NUDCD1|84955|NudC domain containing 1##NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	0.963734	CTCF.p2:15:0.964
chr8	117560649	117560783	reg1024762.p2	5.782	+	TSC_hg19_v1_chr8_-_116681365 AF183810	-879381	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	-879551	-	TSC_hg19_v1_chr8_-_116680208 AK304046	-880496	-	TSC_hg19_v1_chr8_-_117768041 BC000386 BT019594 CR456906 CU674186 AK222620 U54559 BC090880	207321	-	AK222520 TSC_hg19_v1_chr8_-_117768063 AK296162 NM_003756	207355	-	BC005955 BC022441 NM_032334 TSC_hg19_v1_chr8_+_117778752	218035	+	AF183810|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC000386|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BT019594|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##CR456906|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222620|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##U54559|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC090880|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222520|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK296162|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##NM_003756|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC005955|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC022441|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##NM_032334|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)	0.07968	
chrX	109909028	109909144	reg1025396.p1	5.782	+	AK091430 NM_001171689	-225628	-	AB037739 AY121804 NM_020769	-246802	+	TSC_hg19_v1_chrX_-_109561428 AJ007014	-347640	-	BC002909 AK293106 AK297563 AK312270 NM_145234	129947	-	NM_001143981 NM_001143982 NM_001143983	130199	-	AK290504 NM_001128166 NM_001128167 TSC_hg19_v1_chrX_+_110187624 AK315284	278461	+	AK091430|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001171689|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AB037739|RGAG1|57529|retrotransposon gag domain containing 1##AY121804|RGAG1|57529|retrotransposon gag domain containing 1##NM_020769|RGAG1|57529|retrotransposon gag domain containing 1##AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC002909|CHRDL1|91851|chordin-like 1##AK293106|CHRDL1|91851|chordin-like 1##AK297563|CHRDL1|91851|chordin-like 1##AK312270|CHRDL1|91851|chordin-like 1##NM_145234|CHRDL1|91851|chordin-like 1##NM_001143981|CHRDL1|91851|chordin-like 1##NM_001143982|CHRDL1|91851|chordin-like 1##NM_001143983|CHRDL1|91851|chordin-like 1##AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	0.997619	CTCF.p2:9:0.998
chr11	120503422	120503557	reg1024767.p1	5.781	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-121024	+	BC063117 NM_001198665 NM_015313	-295872	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	-296385	+	AB384776 NM_014619 S67803	27538	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	391321	+	NM_005422	469885	+	AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha	0.0	
chr6	132482569	132482705	reg1027499.p1	5.781	+	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	-210223	-	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-353376	+	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	-353476	+	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	239979	-	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	351613	-	BC069083 NM_175057 AY183469	376790	+	BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7##BC069083|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##NM_175057|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183469|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)	0.985394	CTCF.p2:-7:0.985
chr9	97077463	97077595	reg1025448.p1	5.781	+	TSC_hg19_v1_chr9_+_97021599 NM_194320 AK289742 AK093956	-55939	+	TSC_hg19_v1_chr9_+_96846806 AK124912	-230715	+	NM_001253829 NM_152422 TSC_hg19_v1_chr9_+_96846745 BC031279 AK310403 AK289692	-230778	+	HQ258506 BC130390 BC143798 NM_017561	13385	-	TSC_hg19_v1_chr9_+_97136850 NM_032558	59304	+	CR536483 HQ258389 BC113632 BC117477 NM_003837 Y10812	278511	-	NM_194320|ZNF169|169841|zinc finger protein 169##AK289742|ZNF169|169841|zinc finger protein 169##AK093956|ZNF169|169841|zinc finger protein 169##AK124912|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253829|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_152422|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC031279|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK310403|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##AK289692|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##HQ258506|FAM22F|54754|family with sequence similarity 22, member F##BC130390|FAM22F|54754|family with sequence similarity 22, member F##BC143798|FAM22F|54754|family with sequence similarity 22, member F##NM_017561|FAM22F|54754|family with sequence similarity 22, member F##NM_032558|HIATL1|84641|hippocampus abundant transcript-like 1##CR536483|FBP2|8789|fructose-1,6-bisphosphatase 2##HQ258389|FBP2|8789|fructose-1,6-bisphosphatase 2##BC113632|FBP2|8789|fructose-1,6-bisphosphatase 2##BC117477|FBP2|8789|fructose-1,6-bisphosphatase 2##NM_003837|FBP2|8789|fructose-1,6-bisphosphatase 2##Y10812|FBP2|8789|fructose-1,6-bisphosphatase 2	0.997653	CTCF.p2:4:0.998
chr2	199174535	199174628	reg1021279.p1	5.780	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	-505211	+	NM_197970 AK302817	-523595	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-524541	-	TSC_hg19_v1_chr2_-_200213802 AK025127	1039269	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	1146221	-	TSC_hg19_v1_chr2_-_200322238 AJ438951	1147669	-	AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2##AJ438951|SATB2|23314|SATB homeobox 2	0.996414	CTCF.p2:3:0.996
chr1	23303265	23303446	reg1003317.p2	5.779	+	TSC_hg19_v1_chr1_+_23037331 NM_004442 NM_017449 AK299701 BC067861 AB210018 AF025304 CU686595 L36643	-265932	+	NM_000491 TSC_hg19_v1_chr1_+_22979728 BC008983	-323632	+	NM_001114101 NM_172369 AK057792 TSC_hg19_v1_chr1_+_22970125 AF087892 AK226152 BC009016 AK130613	-333168	+	NM_001242521	38987	-	TSC_hg19_v1_chr1_+_23345960 NM_001009999 NM_015013	42600	+	TSC_hg19_v1_chr1_+_23345985 AB011173 BC040194 AK290328 BC048134	42693	+	NM_004442|EPHB2|2048|EPH receptor B2##NM_017449|EPHB2|2048|EPH receptor B2##AK299701|EPHB2|2048|EPH receptor B2##BC067861|EPHB2|2048|EPH receptor B2##AB210018|EPHB2|2048|EPH receptor B2##AF025304|EPHB2|2048|EPH receptor B2##L36643|EPHB2|2048|EPH receptor B2##NM_000491|C1QB|713|complement component 1, q subcomponent, B chain##BC008983|C1QB|713|complement component 1, q subcomponent, B chain##NM_001114101|C1QC|714|complement component 1, q subcomponent, C chain##NM_172369|C1QC|714|complement component 1, q subcomponent, C chain##AK057792|C1QC|714|complement component 1, q subcomponent, C chain##AF087892|C1QC|714|complement component 1, q subcomponent, C chain##AK226152|C1QC|714|complement component 1, q subcomponent, C chain##BC009016|C1QC|714|complement component 1, q subcomponent, C chain##AK130613|C1QC|714|complement component 1, q subcomponent, C chain##NM_001242521|LOC729059|729059|uncharacterized LOC729059##NM_001009999|KDM1A|23028|lysine (K)-specific demethylase 1A##NM_015013|KDM1A|23028|lysine (K)-specific demethylase 1A##AB011173|KDM1A|23028|lysine (K)-specific demethylase 1A##BC040194|KDM1A|23028|lysine (K)-specific demethylase 1A##AK290328|KDM1A|23028|lysine (K)-specific demethylase 1A##BC048134|KDM1A|23028|lysine (K)-specific demethylase 1A	0.063608	
chr17	62961977	62962158	reg1017349.p1	5.779	+	TSC_hg19_v1_chr17_-_62915587 AK294371	-46471	-	AB011135 NM_199340	-47165	-	AB384498 TSC_hg19_v1_chr17_-_62893379 BC043145 BC048966	-68676	-	TSC_hg19_v1_chr17_-_62971685 BX537538 AK056627 BC063466 AK311317	9553	-	TSC_hg19_v1_chr17_-_63009302 AK026902	47239	-	TSC_hg19_v1_chr17_-_63052724 AB528470 AF493902 CU691408 DQ893572 DQ894448 AK313672	90651	-	AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3##NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC043145|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC048966|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BX537538|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK056627|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##BC063466|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK311317|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AF493902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ893572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ894448|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AK313672|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	0.0	
chr21	28222463	28222569	reg1018815.p2	5.779	+	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	-4804	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	-5045	-	AY061853 AF401639 AK223576 AK313231 BC036761 AL833200 NM_052954 AK054581 AK304124	-277082	-	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	116923	-	TSC_hg19_v1_chr21_-_30257688 AB590951 BC011554 AK314100 AK225515 AF139682 NM_013240 NM_182749	2035147	-	BC007525 AB384515 TSC_hg19_v1_chr21_-_30365185 AF161350 AB018257 BC150284 AB621822 BC029371 BC140790 AK001915 BC031633 NM_015565	2142677	-	AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AY061853|CYYR1|116159|cysteine/tyrosine-rich 1##AF401639|CYYR1|116159|cysteine/tyrosine-rich 1##AK223576|CYYR1|116159|cysteine/tyrosine-rich 1##AK313231|CYYR1|116159|cysteine/tyrosine-rich 1##BC036761|CYYR1|116159|cysteine/tyrosine-rich 1##AL833200|CYYR1|116159|cysteine/tyrosine-rich 1##NM_052954|CYYR1|116159|cysteine/tyrosine-rich 1##AK054581|CYYR1|116159|cysteine/tyrosine-rich 1##AK304124|CYYR1|116159|cysteine/tyrosine-rich 1##AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##BC007525|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF161350|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AB018257|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC150284|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC029371|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC140790|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AK001915|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC031633|LTN1|26046|listerin E3 ubiquitin protein ligase 1##NM_015565|LTN1|26046|listerin E3 ubiquitin protein ligase 1	0.980354	CTCF.p2:22:0.939
chr5	122680647	122680775	reg1025173.p2	5.779	+	NM_001136239 AK297992 AF272898 AF272899	-255867	+	TSC_hg19_v1_chr5_-_122372418 AK304053 NM_000943	-308287	-	CU678110 TSC_hg19_v1_chr5_-_122372375 AK290321 BC002678	-308347	-	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	78433	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	167171	+	BC131507 AB033107 BC151226 NM_020747	1400077	-	NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##AK304053|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##NM_000943|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##AK290321|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##BC002678|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608	0.0	
chr7	34636626	34636750	reg1026603.p1	5.779	+	AK289963 NM_133468 AK096150 BC060868	-691546	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-1467607	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-1487711	-	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	61231	+	DQ287932 NM_015283	440964	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	589104	-	AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)	0.016954	
chr9	140181510	140181624	reg1023003.p1	5.779	+	TSC_hg19_v1_chr9_+_140172277 AK000252 NM_017723	-9282	+	TSC_hg19_v1_chr9_+_140149888 AF464935 AB384577 AM393289	-31644	+	TSC_hg19_v1_chr9_+_140149768 BC019029	-31768	+	BC053618 NM_001004354 TSC_hg19_v1_chr9_-_140196724	15153	-	BC065002 TSC_hg19_v1_chr9_-_140317615 BC110879 AK000440 AK094438 BC039252 BC037355	136043	-	TSC_hg19_v1_chr9_-_140317652 BC033079 BC069205	136109	-	AK000252|C9orf167|54863|chromosome 9 open reading frame 167##NM_017723|C9orf167|54863|chromosome 9 open reading frame 167##AF464935|COBRA1|25920|cofactor of BRCA1##AM393289|COBRA1|25920|cofactor of BRCA1##BC019029|COBRA1|25920|cofactor of BRCA1##BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein##NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein##BC065002|EXD3|54932|exonuclease 3'-5' domain containing 3##BC110879|EXD3|54932|exonuclease 3'-5' domain containing 3##AK000440|EXD3|54932|exonuclease 3'-5' domain containing 3##AK094438|EXD3|54932|exonuclease 3'-5' domain containing 3##BC039252|EXD3|54932|exonuclease 3'-5' domain containing 3##BC037355|EXD3|54932|exonuclease 3'-5' domain containing 3##BC033079|EXD3|54932|exonuclease 3'-5' domain containing 3##BC069205|EXD3|54932|exonuclease 3'-5' domain containing 3	0.931552	CTCF.p2:-1:0.932
chr15	43806797	43806926	reg1022723.p1	5.778	+	BC112161 NM_005657 AF078776 TSC_hg19_v1_chr15_-_43802798	-4125	-	BC063119 TSC_hg19_v1_chr15_-_43785370	-21475	-	TSC_hg19_v1_chr15_-_43785355 AK292915 BC017846 AB210025 BX537418 AK295764 AK307405 NM_001141979 NM_001141980	-21551	-	NM_002373 TSC_hg19_v1_chr15_+_43809825 AK291052 BC055312 BC094702 BC010470	2968	+	AF543190 AF502586 AF502588 NM_014659 AB002375 AF502587 AF502589	70205	-	BC050263 BX538022 BX647814 AK307438 NM_001130858 NM_001130859 NM_001190214	75557	-	BC112161|TP53BP1|7158|tumor protein p53 binding protein 1##NM_005657|TP53BP1|7158|tumor protein p53 binding protein 1##AF078776|TP53BP1|7158|tumor protein p53 binding protein 1##BC063119|TP53BP1|7158|tumor protein p53 binding protein 1##AK292915|TP53BP1|7158|tumor protein p53 binding protein 1##BC017846|TP53BP1|7158|tumor protein p53 binding protein 1##AB210025|TP53BP1|7158|tumor protein p53 binding protein 1##BX537418|TP53BP1|7158|tumor protein p53 binding protein 1##AK295764|TP53BP1|7158|tumor protein p53 binding protein 1##AK307405|TP53BP1|7158|tumor protein p53 binding protein 1##NM_001141979|TP53BP1|7158|tumor protein p53 binding protein 1##NM_001141980|TP53BP1|7158|tumor protein p53 binding protein 1##NM_002373|MAP1A|4130|microtubule-associated protein 1A##AK291052|MAP1A|4130|microtubule-associated protein 1A##BC055312|MAP1A|4130|microtubule-associated protein 1A##BC094702|MAP1A|4130|microtubule-associated protein 1A##BC010470|MAP1A|4130|microtubule-associated protein 1A##AF543190|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AF502586|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AF502588|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##NM_014659|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AB002375|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AF502587|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AF502589|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##BC050263|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##BX538022|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##BX647814|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##AK307438|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##NM_001130858|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##NM_001130859|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1##NM_001190214|PPIP5K1|9677|diphosphoinositol pentakisphosphate kinase 1	0.749932	CTCF.p2:23:0.750
chr3	143614809	143614963	reg1022021.p1	5.778	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	-47619	-	BC067737 TSC_hg19_v1_chr3_+_142895211	-719715	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-776235	+	NM_173552 AK315082	75766	+	TSC_hg19_v1_chr3_+_143690915 BC037293	76104	+	NM_001134470 AK294020	77331	+	AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58##NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58##AK294020|C3orf58|205428|chromosome 3 open reading frame 58	0.112882	
chrX	84882520	84882662	reg1027008.p1	5.778	+	TSC_hg19_v1_chrX_-_84634749 AF309774 NM_024921	-247842	-	TSC_hg19_v1_chrX_-_84634671 AK314295 AK025039 AK290360 BC017500	-247895	-	TSC_hg19_v1_chrX_-_84634396 DQ892227	-248164	-	AK299323 BC032237 BC130494 BC130496 AK291160 AK312443 NM_000390 NM_001145414 X78121	419960	-	TSC_hg19_v1_chrX_+_85403454 AK290596 NM_001139514 NM_053281	520861	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	520874	+	AF309774|POF1B|79983|premature ovarian failure, 1B##NM_024921|POF1B|79983|premature ovarian failure, 1B##AK314295|POF1B|79983|premature ovarian failure, 1B##AK025039|POF1B|79983|premature ovarian failure, 1B##AK290360|POF1B|79983|premature ovarian failure, 1B##BC017500|POF1B|79983|premature ovarian failure, 1B##DQ892227|POF1B|79983|premature ovarian failure, 1B##AK299323|CHM|1121|choroideremia (Rab escort protein 1)##BC032237|CHM|1121|choroideremia (Rab escort protein 1)##BC130494|CHM|1121|choroideremia (Rab escort protein 1)##BC130496|CHM|1121|choroideremia (Rab escort protein 1)##AK291160|CHM|1121|choroideremia (Rab escort protein 1)##AK312443|CHM|1121|choroideremia (Rab escort protein 1)##NM_000390|CHM|1121|choroideremia (Rab escort protein 1)##NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)##X78121|CHM|1121|choroideremia (Rab escort protein 1)##AK290596|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139514|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_053281|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)	0.515899	CTCF.p2:-15:0.516
chr16	17510539	17510675	reg1024155.p1	5.777	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-1184077	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1184119	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-1184125	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	54198	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1062784	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1287489	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.754725	CTCF.p2:0:0.755
chr16	4303592	4303701	reg1018568.p2	5.777	+	AL831973 AL832361 BX647476 AK056588 NM_001098814	-11580	-	AJ133123 NM_001116 TSC_hg19_v1_chr16_-_4166252	-137416	-	BC151207 AB011092 BC151229 TSC_hg19_v1_chr16_-_4166045	-137612	-	TSC_hg19_v1_chr16_-_4303791 AK094828	135	-	X57435 DQ893617 DQ895293 CR541726 CU679751 AB464303 TSC_hg19_v1_chr16_-_4322885 BC010576	19182	-	NM_003223 S73885 TSC_hg19_v1_chr16_-_4323025	19366	-	AL831973|SRL|6345|sarcalumenin##AL832361|SRL|6345|sarcalumenin##BX647476|SRL|6345|sarcalumenin##AK056588|SRL|6345|sarcalumenin##NM_001098814|SRL|6345|sarcalumenin##AJ133123|ADCY9|115|adenylate cyclase 9##NM_001116|ADCY9|115|adenylate cyclase 9##BC151207|ADCY9|115|adenylate cyclase 9##AB011092|ADCY9|115|adenylate cyclase 9##BC151229|ADCY9|115|adenylate cyclase 9##AK094828|LOC100507501|100507501|uncharacterized LOC100507501##X57435|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ893617|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ895293|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##CR541726|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##BC010576|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	0.0	
chr4	163880375	163880491	reg1025445.p2	5.777	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	-795282	-	AK294459 NM_014247	-3691436	+	AK058100 NM_152543	-3924101	-	TSC_hg19_v1_chr4_-_164088002 AK097352	207559	-	TSC_hg19_v1_chr4_-_164088043 AK308601	207604	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	207645	-	AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.966533	CTCF.p2:6:0.967
chrX	86554691	86554820	reg1026633.p1	5.777	+	AK055953 AK298787 NM_001139515	-1036785	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	-1151290	+	TSC_hg19_v1_chrX_+_85403454 AK290596 NM_001139514 NM_053281	-1151303	+	NM_019117 NM_057162 AK056457 AB051474 BC161675 AL832514 AF284765 AF284766 BC140839 BC140840 BC142652 BC146677 AB385497	218050	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	1447485	+	BC117398 BC117400 NM_138960 BC101144 BC101145 AF497480 BC029920 AB464725 HQ258115	2622256	+	AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)##AK290596|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139514|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_053281|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)##NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)##AK056457|KLHL4|56062|kelch-like 4 (Drosophila)##AB051474|KLHL4|56062|kelch-like 4 (Drosophila)##BC161675|KLHL4|56062|kelch-like 4 (Drosophila)##AL832514|KLHL4|56062|kelch-like 4 (Drosophila)##AF284765|KLHL4|56062|kelch-like 4 (Drosophila)##AF284766|KLHL4|56062|kelch-like 4 (Drosophila)##BC140839|KLHL4|56062|kelch-like 4 (Drosophila)##BC140840|KLHL4|56062|kelch-like 4 (Drosophila)##BC142652|KLHL4|56062|kelch-like 4 (Drosophila)##BC146677|KLHL4|56062|kelch-like 4 (Drosophila)##NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1##BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	0.647465	CTCF.p2:4:0.647
chr13	99681229	99681354	reg1025379.p1	5.776	+	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	-51001	-	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	-276386	-	TSC_hg19_v1_chr13_-_99229363 BC035578 BC065378 NM_001032296	-451980	-	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	57400	-	AK290342 NM_001144072	171387	+	TSC_hg19_v1_chr13_-_99852951 BC043515 AK097488	171676	-	AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC035578|STK24|8428|serine/threonine kinase 24##BC065378|STK24|8428|serine/threonine kinase 24##NM_001032296|STK24|8428|serine/threonine kinase 24##BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9##AK290342|UBAC2|337867|UBA domain containing 2##NM_001144072|UBAC2|337867|UBA domain containing 2##BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)	0.96996	CTCF.p2:-6:0.970
chr17	12927900	12928019	reg1024123.p2	5.776	+	TSC_hg19_v1_chr17_-_12921332 AK001392 NM_001165962 NM_018127 NM_173717	-6603	-	TSC_hg19_v1_chr17_-_12921325 AK298397 AK094687 BC001939 BC004158	-6640	-	TSC_hg19_v1_chr17_-_12921295 AK300011 AF304370 CR457261 CU674942	-6683	-	AY358838 TSC_hg19_v1_chr17_-_13505228 AF105376 NM_006042 AK292047	577278	-	TSC_hg19_v1_chr17_-_13972756 AK123100	1044803	-	NM_001303 TSC_hg19_v1_chr17_+_13972839 AK312718	1044820	+	AK001392|ELAC2|60528|elaC homolog 2 (E. coli)##NM_001165962|ELAC2|60528|elaC homolog 2 (E. coli)##NM_018127|ELAC2|60528|elaC homolog 2 (E. coli)##NM_173717|ELAC2|60528|elaC homolog 2 (E. coli)##AK298397|ELAC2|60528|elaC homolog 2 (E. coli)##AK094687|ELAC2|60528|elaC homolog 2 (E. coli)##BC001939|ELAC2|60528|elaC homolog 2 (E. coli)##BC004158|ELAC2|60528|elaC homolog 2 (E. coli)##AK300011|ELAC2|60528|elaC homolog 2 (E. coli)##AF304370|ELAC2|60528|elaC homolog 2 (E. coli)##CR457261|ELAC2|60528|elaC homolog 2 (E. coli)##AY358838|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AF105376|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_006042|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AK292047|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_001303|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK312718|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	0.985356	CTCF.p2:1:0.985
chr2	173940479	173940614	reg1024395.p1	5.776	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	0	+	AB208974 TSC_hg19_v1_chr2_+_173940455	-98	+	BC040183 NM_001100397 AK311500 AK311697	-254220	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	102	+	TSC_hg19_v1_chr2_+_174219599 AY029179 NM_031942 NM_145810 AK027642 AK027628 BC027966 AK075134 AK297097 AK300949 AK297245 AL834186 CU693352 AB527763	279067	+	AK023489 TSC_hg19_v1_chr2_-_174767427	826808	-	AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AB208974|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC040183|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##NM_001100397|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311500|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311697|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AY029179|CDCA7|83879|cell division cycle associated 7##NM_031942|CDCA7|83879|cell division cycle associated 7##NM_145810|CDCA7|83879|cell division cycle associated 7##AK027642|CDCA7|83879|cell division cycle associated 7##AK027628|CDCA7|83879|cell division cycle associated 7##BC027966|CDCA7|83879|cell division cycle associated 7##AK075134|CDCA7|83879|cell division cycle associated 7##AK297097|CDCA7|83879|cell division cycle associated 7##AK300949|CDCA7|83879|cell division cycle associated 7##AK297245|CDCA7|83879|cell division cycle associated 7##AL834186|CDCA7|83879|cell division cycle associated 7	0.0	
chr3	168338589	168338706	reg1002495.p1	5.776	+	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	-525216	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	-525532	-	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-885158	+	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	525432	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	525715	-	BX640908 NM_001164000	526874	-	AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus	0.0	
chr3	9890624	9890727	reg1021565.p2	5.776	+	TSC_hg19_v1_chr3_-_9885703 AK094587 AK299556 BC065741 AK291888 NM_001142547 NM_173659	-4961	-	TSC_hg19_v1_chr3_-_9885693 AK296202	-4987	-	TSC_hg19_v1_chr3_-_9885680 CU687542 CU689290 AK092026 AX747321 BC032135 BC049846 BC062362	-5005	-	BC016851 NM_001199623 TSC_hg19_v1_chr3_-_9920497	29809	-	TSC_hg19_v1_chr3_-_9920639 AF303893 AY364640 NM_022094	30011	-	TSC_hg19_v1_chr3_-_9921936 AK024524 AK024530 NM_001199551 NM_001199552	31262	-	AK094587|RPUSD3|285367|RNA pseudouridylate synthase domain containing 3##AK299556|RPUSD3|285367|RNA pseudouridylate synthase domain containing 3##BC065741|RPUSD3|285367|RNA pseudouridylate synthase domain containing 3##AK291888|RPUSD3|285367|RNA pseudouridylate synthase domain containing 3##NM_001142547|RPUSD3|285367|RNA pseudouridylate synthase domain containing 3##NM_173659|RPUSD3|285367|RNA pseudouridylate synthase domain containing 3##AK296202|RPUSD3|285367|RNA pseudouridylate synthase domain containing 3##AK092026|RPUSD3|285367|RNA pseudouridylate synthase domain containing 3##BC032135|RPUSD3|285367|RNA pseudouridylate synthase domain containing 3##BC049846|RPUSD3|285367|RNA pseudouridylate synthase domain containing 3##BC062362|RPUSD3|285367|RNA pseudouridylate synthase domain containing 3##BC016851|CIDEC|63924|cell death-inducing DFFA-like effector c##NM_001199623|CIDEC|63924|cell death-inducing DFFA-like effector c##AF303893|CIDEC|63924|cell death-inducing DFFA-like effector c##AY364640|CIDEC|63924|cell death-inducing DFFA-like effector c##NM_022094|CIDEC|63924|cell death-inducing DFFA-like effector c##AK024524|CIDEC|63924|cell death-inducing DFFA-like effector c##AK024530|CIDEC|63924|cell death-inducing DFFA-like effector c##NM_001199551|CIDEC|63924|cell death-inducing DFFA-like effector c##NM_001199552|CIDEC|63924|cell death-inducing DFFA-like effector c	0.349692	CTCF.p2:-25:0.350
chr6	5950886	5950996	reg1024532.p2	5.776	+	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-689251	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-689679	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-689775	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	56200	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	56756	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	369944	-	NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide	0.994509	CTCF.p2:-3:0.995
chrX	151849645	151849767	reg1027334.p1	5.776	+	AF189259 BC109210 BC109211 NM_018558 AF144648	-43053	+	S62908 TSC_hg19_v1_chrX_-_151619798 BC028629 NM_000808	-229957	-	AY522506 BC004105 AK314161 NM_001011543 NM_001204811 NM_001251828 NM_021048	-542702	-	NM_005363 NM_175868 AK289437 BC067731 BC041599 BC109188 BX640600	17565	+	NM_001129826 BC119734 BC119735 AF080246 AF136715 NM_001080848 NM_001129828 NM_004909	28001	-	AK290443 BC108720 NM_005361 NM_175742 NM_175743	33390	+	AF189259|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##BC109210|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##BC109211|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##NM_018558|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##AF144648|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##S62908|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3##BC028629|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3##NM_000808|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3##BC004105|MAGEA10|4109|melanoma antigen family A, 10##AK314161|MAGEA10|4109|melanoma antigen family A, 10##NM_001011543|MAGEA10|4109|melanoma antigen family A, 10##NM_001204811|MAGEA10-MAGEA5|100533997|MAGEA10-MAGEA5 readthrough##NM_001251828|MAGEA10|4109|melanoma antigen family A, 10##NM_021048|MAGEA10|4109|melanoma antigen family A, 10##NM_005363|MAGEA6|4105|melanoma antigen family A, 6##NM_175868|MAGEA6|4105|melanoma antigen family A, 6##AK289437|MAGEA6|4105|melanoma antigen family A, 6##BC067731|MAGEA6|4105|melanoma antigen family A, 6##BC041599|MAGEA6|4105|melanoma antigen family A, 6##BC109188|MAGEA2|4101|melanoma antigen family A, 2##BX640600|MAGEA6|4105|melanoma antigen family A, 6##NM_001129826|CSAG3|389903|CSAG family, member 3##BC119734|CSAG3|389903|CSAG family, member 3##BC119735|CSAG3|389903|CSAG family, member 3##AF080246|CSAG3|389903|CSAG family, member 3##AF136715|CSAG3|389903|CSAG family, member 3##NM_001080848|CSAG2|728461|CSAG family, member 2##NM_001129828|CSAG3|389903|CSAG family, member 3##NM_004909|CSAG2|728461|CSAG family, member 2##AK290443|MAGEA2|4101|melanoma antigen family A, 2##BC108720|MAGEA2|4101|melanoma antigen family A, 2##NM_005361|MAGEA2|4101|melanoma antigen family A, 2##NM_175742|MAGEA2|4101|melanoma antigen family A, 2##NM_175743|MAGEA2|4101|melanoma antigen family A, 2	1.758488	CTCF.p2:-8:0.984	CTCF.p2:14:0.775
chr10	92412425	92412526	reg1023075.p2	5.775	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-913708	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-951100	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-1007151	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	204971	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	205258	-	TSC_hg19_v1_chr10_+_92631241 BC006991	218782	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.49601	CTCF.p2:2:0.496
chr15	95125743	95125895	reg1028425.p1	5.775	+	NM_001159644 BC025708 BC111024 AK002037	-226510	+	NM_001159643 NM_018349 AY656717 BC131527	-284358	+	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	-350961	+	TSC_hg19_v1_chr15_-_95870310 BC040875	744500	-	BC106083 NM_001145155 FM208183	1743342	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	1748158	+	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##BC040875|LOC400456|400456|uncharacterized LOC400456##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.293458	CTCF.p2:-24:0.293
chr16	11351376	11351554	reg1009980.p2	5.775	+	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	-1415	-	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-313022	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-315230	-	X63758 BC096135 BC096136 BC096137 NM_005425	11673	-	NM_021247	15986	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	18855	-	AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2	0.0	
chr18	42159134	42159257	reg1023811.p1	5.775	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1301766	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-1463626	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-2623962	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	100919	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	101673	+	NM_001242692 AK292422	633757	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.0	
chr1	94097329	94097429	reg1023562.p1	5.775	+	TSC_hg19_v1_chr1_+_94057602 BC084562	-39772	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-39839	+	TSC_hg19_v1_chr1_+_93913680 NM_001024948 NM_001164473 NM_017737 AY514449	-183657	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	49948	-	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	247335	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	247369	-	BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##NM_001024948|FNBP1L|54874|formin binding protein 1-like##NM_001164473|FNBP1L|54874|formin binding protein 1-like##NM_017737|FNBP1L|54874|formin binding protein 1-like##AY514449|FNBP1L|54874|formin binding protein 1-like##U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2	0.858662	CTCF.p2:-1:0.859
chr2	208007282	208007400	reg1021545.p1	5.775	+	BC112076 BC112078 NM_173077 AJ422118	-203041	+	AK021557 TSC_hg19_v1_chr2_+_207630326 AK001516 AF223470 AL833877	-377018	+	NM_001136193 NM_001136194 NM_014929	-377230	+	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	23315	-	BC012919 TSC_hg19_v1_chr2_-_208031680	24284	-	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	387302	+	BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##AK021557|FASTKD2|22868|FAST kinase domains 2##AK001516|FASTKD2|22868|FAST kinase domains 2##AF223470|FASTKD2|22868|FAST kinase domains 2##AL833877|FASTKD2|22868|FAST kinase domains 2##NM_001136193|FASTKD2|22868|FAST kinase domains 2##NM_001136194|FASTKD2|22868|FAST kinase domains 2##NM_014929|FASTKD2|22868|FAST kinase domains 2##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1	0.528023	CTCF.p2:-14:0.528
chr22	29808886	29809000	reg1025405.p2	5.775	+	TSC_hg19_v1_chr22_-_29784570 BC046242 NM_001127 NM_001166019 NM_145730	-24351	-	L13939 TSC_hg19_v1_chr22_-_29784436	-24506	-	TSC_hg19_v1_chr22_-_29711687 BC058077 BC050739 BC022473 NM_001007279 NM_006477	-97245	-	AJ010228 AJ010229 NM_021026	25628	+	AK302660 NM_021076 TSC_hg19_v1_chr22_+_29876208 BC073969 AF203032	67272	+	NM_001002878 NM_001002879 BC003615 TSC_hg19_v1_chr22_-_29949699 AK025385 AB023200 AK225752 NM_001002877 NM_003678	140754	-	BC046242|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_001127|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_001166019|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##NM_145730|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##L13939|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit##BC058077|RASL10A|10633|RAS-like, family 10, member A##BC050739|RASL10A|10633|RAS-like, family 10, member A##BC022473|RASL10A|10633|RAS-like, family 10, member A##NM_001007279|RASL10A|10633|RAS-like, family 10, member A##NM_006477|RASL10A|10633|RAS-like, family 10, member A##AJ010228|RFPL1|5988|ret finger protein-like 1##AJ010229|RFPL1|5988|ret finger protein-like 1##NM_021026|RFPL1|5988|ret finger protein-like 1##AK302660|NEFH|4744|neurofilament, heavy polypeptide##NM_021076|NEFH|4744|neurofilament, heavy polypeptide##BC073969|NEFH|4744|neurofilament, heavy polypeptide##AF203032|NEFH|4744|neurofilament, heavy polypeptide##NM_001002878|THOC5|8563|THO complex 5##NM_001002879|THOC5|8563|THO complex 5##BC003615|THOC5|8563|THO complex 5##AK025385|THOC5|8563|THO complex 5##AB023200|THOC5|8563|THO complex 5##AK225752|THOC5|8563|THO complex 5##NM_001002877|THOC5|8563|THO complex 5##NM_003678|THOC5|8563|THO complex 5	0.996354	CTCF.p2:1:0.996
chr10	11220232	11220357	reg1024911.p1	5.774	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-12802	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-12848	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-12869	+	NM_001080491	353979	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	433342	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	564104	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.336442	CTCF.p2:-21:0.336
chr1	165377881	165378017	reg1025483.p2	5.774	+	AK127724 NM_177398	-51998	-	AK122800 NM_001174069	-52474	-	TSC_hg19_v1_chr1_+_164818083 AK022520	-559826	+	AB593016 AK312922 NM_006917	36596	-	TSC_hg19_v1_chr1_+_165513441 NM_001005214 BC132981 BC132983	135523	+	NM_004528	222160	+	AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AB593016|RXRG|6258|retinoid X receptor, gamma##AK312922|RXRG|6258|retinoid X receptor, gamma##NM_006917|RXRG|6258|retinoid X receptor, gamma##NM_001005214|LRRC52|440699|leucine rich repeat containing 52##BC132981|LRRC52|440699|leucine rich repeat containing 52##BC132983|LRRC52|440699|leucine rich repeat containing 52##NM_004528|MGST3|4259|microsomal glutathione S-transferase 3	0.90365	CTCF.p2:-16:0.904
chr18	46475926	46476106	reg1023183.p1	5.774	+	AK301535 NM_001190822	-314	-	AK131394 NM_001190823	-6869	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-410243	+	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	751	-	AF010193 NM_001190821 NM_005904	1064	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	511035	-	AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin	0.0	
chr3	38173232	38173345	reg1026053.p1	5.774	+	AB020522 BC129824 BC129825 BC171799 NM_007335 NM_007337 AK302803 AB425198	-92579	+	AB385114 BC056157 AB209862 U09117 BC050382 AK098690 AK127813 AK292324 NM_006225 TSC_hg19_v1_chr3_-_38071155	-102196	-	NM_001130964	-107011	-	AF035295 TSC_hg19_v1_chr3_-_38178569 CU677013 CU680144 DQ891298 DQ893346 DQ894482 AK303251 AB529164 BC014474 X12966 X14813 AK025138 AK293716 BC011977	5228	-	TSC_hg19_v1_chr3_-_38178570 BC025780	5284	-	TSC_hg19_v1_chr3_-_38178584 AK316551 AK301056 BC039837 BC000635 NM_001130410 NM_001607	5368	-	AB020522|DLEC1|9940|deleted in lung and esophageal cancer 1##BC129824|DLEC1|9940|deleted in lung and esophageal cancer 1##BC129825|DLEC1|9940|deleted in lung and esophageal cancer 1##BC171799|DLEC1|9940|deleted in lung and esophageal cancer 1##NM_007335|DLEC1|9940|deleted in lung and esophageal cancer 1##NM_007337|DLEC1|9940|deleted in lung and esophageal cancer 1##AK302803|DLEC1|9940|deleted in lung and esophageal cancer 1##AB425198|DLEC1|9940|deleted in lung and esophageal cancer 1##AB209862|PLCD1|5333|phospholipase C, delta 1##U09117|PLCD1|5333|phospholipase C, delta 1##BC050382|PLCD1|5333|phospholipase C, delta 1##AK098690|PLCD1|5333|phospholipase C, delta 1##AK127813|PLCD1|5333|phospholipase C, delta 1##AK292324|PLCD1|5333|phospholipase C, delta 1##NM_006225|PLCD1|5333|phospholipase C, delta 1##NM_001130964|PLCD1|5333|phospholipase C, delta 1##AF035295|ACAA1|30|acetyl-CoA acyltransferase 1##DQ891298|ACAA1|30|acetyl-CoA acyltransferase 1##DQ893346|ACAA1|30|acetyl-CoA acyltransferase 1##DQ894482|ACAA1|30|acetyl-CoA acyltransferase 1##AK303251|ACAA1|30|acetyl-CoA acyltransferase 1##BC014474|ACAA1|30|acetyl-CoA acyltransferase 1##X12966|ACAA1|30|acetyl-CoA acyltransferase 1##X14813|ACAA1|30|acetyl-CoA acyltransferase 1##AK025138|ACAA1|30|acetyl-CoA acyltransferase 1##AK293716|ACAA1|30|acetyl-CoA acyltransferase 1##BC011977|ACAA1|30|acetyl-CoA acyltransferase 1##BC025780|ACAA1|30|acetyl-CoA acyltransferase 1##AK316551|ACAA1|30|acetyl-CoA acyltransferase 1##AK301056|ACAA1|30|acetyl-CoA acyltransferase 1##BC039837|ACAA1|30|acetyl-CoA acyltransferase 1##BC000635|ACAA1|30|acetyl-CoA acyltransferase 1##NM_001130410|ACAA1|30|acetyl-CoA acyltransferase 1##NM_001607|ACAA1|30|acetyl-CoA acyltransferase 1	0.085365	
chr4	80219287	80219397	reg1025461.p1	5.774	+	AK055774 BX648346 CU689134 AY424281 BC029604 TSC_hg19_v1_chr4_-_79860593 BC031256 BC047510 AK291232 NM_001040202 AX775925	-358860	-	TSC_hg19_v1_chr4_+_79697552 AK292147 BC036021 DQ890994	-521719	+	NM_017593 NM_198892 TSC_hg19_v1_chr4_+_79697532	-521806	+	BC063623 BC080651 BC004552 NM_032693	27819	-	CU688758 DQ891321 DQ894505 BC058888 AK312768 BC029820 BC048274 X78712 NM_033214 AK292241 BC027598	110025	-	AB527650 AY233452 TSC_hg19_v1_chr4_-_80993874 AY040326 BC114374 AB209913	774546	-	AK055774|PAQR3|152559|progestin and adipoQ receptor family member III##BX648346|PAQR3|152559|progestin and adipoQ receptor family member III##AY424281|PAQR3|152559|progestin and adipoQ receptor family member III##BC029604|PAQR3|152559|progestin and adipoQ receptor family member III##BC031256|PAQR3|152559|progestin and adipoQ receptor family member III##BC047510|PAQR3|152559|progestin and adipoQ receptor family member III##AK291232|PAQR3|152559|progestin and adipoQ receptor family member III##NM_001040202|PAQR3|152559|progestin and adipoQ receptor family member III##AX775925|PAQR3|152559|progestin and adipoQ receptor family member III##AK292147|BMP2K|55589|BMP2 inducible kinase##BC036021|BMP2K|55589|BMP2 inducible kinase##DQ890994|BMP2K|55589|BMP2 inducible kinase##NM_017593|BMP2K|55589|BMP2 inducible kinase##NM_198892|BMP2K|55589|BMP2 inducible kinase##BC063623|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC080651|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC004552|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##NM_032693|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##DQ891321|GK2|2712|glycerol kinase 2##DQ894505|GK2|2712|glycerol kinase 2##BC058888|GK2|2712|glycerol kinase 2##BC029820|GK2|2712|glycerol kinase 2##BC048274|GK2|2712|glycerol kinase 2##X78712|GK2|2712|glycerol kinase 2##NM_033214|GK2|2712|glycerol kinase 2##AK292241|GK2|2712|glycerol kinase 2##BC027598|GK2|2712|glycerol kinase 2##AY233452|ANTXR2|118429|anthrax toxin receptor 2##AY040326|ANTXR2|118429|anthrax toxin receptor 2##BC114374|ANTXR2|118429|anthrax toxin receptor 2##AB209913|ANTXR2|118429|anthrax toxin receptor 2	0.898663	CTCF.p2:-10:0.899
chr5	131999102	131999282	reg1019245.p2	5.774	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	-5302	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-106552	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	-120000	-	NM_000589 NM_172348	10180	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	74025	-	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	83952	+	BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A##AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2	0.0	
chr5	58167595	58167725	reg1028709.p1	5.774	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	-288741	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	-380366	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	-411724	-	BC036319 NM_001197223	128098	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	167718	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	404270	-	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.998228	CTCF.p2:6:0.998
chr17	66790801	66790944	reg1024162.p1	5.773	+	AK056789 BC136686 BC136689 AY358197 NM_001243746 NM_017565 TSC_hg19_v1_chr17_-_66597112	-193849	-	AK298071 TSC_hg19_v1_chr17_-_66596742	-194133	-	TSC_hg19_v1_chr17_+_66508570 BC036285 S54705 AK124586 AK312307 CR749311 M18468 M33336	-282273	+	BC130280 BC143971 BC143972 AK304286 BC010392 AB020629 BC047765 BC094689 AK304360 AK295876 BC037309 BC024003 NM_007168	160584	-	BC062472 AK057068 AY028899 NM_080283	266218	-	BC125231 BC125232 AY028898 NM_080284 TSC_hg19_v1_chr17_-_67138037 BC070125 AK308431 BC029852	347203	-	AK056789|FAM20A|54757|family with sequence similarity 20, member A##BC136686|FAM20A|54757|family with sequence similarity 20, member A##BC136689|FAM20A|54757|family with sequence similarity 20, member A##AY358197|FAM20A|54757|family with sequence similarity 20, member A##NM_001243746|FAM20A|54757|family with sequence similarity 20, member A##NM_017565|FAM20A|54757|family with sequence similarity 20, member A##AK298071|FAM20A|54757|family with sequence similarity 20, member A##BC036285|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##S54705|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK124586|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK312307|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##CR749311|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M18468|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M33336|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	0.414067	CTCF.p2:13:0.414
chr3	167402311	167402457	reg1025750.p2	5.773	+	TSC_hg19_v1_chr3_-_167371732 AK097556	-30661	-	BC035512 NM_178824	-31096	-	AK226025 AB006423 NM_006217 AK293391	-210564	-	BC002506 NM_007217 AF022385 NM_145860 TSC_hg19_v1_chr3_-_167452681 BC016353 NM_145859 AK291130	50267	-	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	51105	+	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	410731	-	AK097556|WDR49|151790|WD repeat domain 49##BC035512|WDR49|151790|WD repeat domain 49##NM_178824|WDR49|151790|WD repeat domain 49##AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##BC002506|PDCD10|11235|programmed cell death 10##NM_007217|PDCD10|11235|programmed cell death 10##AF022385|PDCD10|11235|programmed cell death 10##NM_145860|PDCD10|11235|programmed cell death 10##BC016353|PDCD10|11235|programmed cell death 10##NM_145859|PDCD10|11235|programmed cell death 10##AK291130|PDCD10|11235|programmed cell death 10##NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4	0.999383	CTCF.p2:-12:0.999
chr9	123505369	123505494	reg1022195.p2	5.773	+	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	-28714	-	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	-163078	-	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	-1373773	-	AF176698 TSC_hg19_v1_chr9_-_123555558	50114	-	TSC_hg19_v1_chr9_-_123555628 BC110334 AF145024 AF193594	50190	-	BC000239 TSC_hg19_v1_chr9_-_123555670 BC018738 AK300066 AK314385 AK022484 NM_012164	50265	-	AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##AF176698|FBXW2|26190|F-box and WD repeat domain containing 2##BC110334|FBXW2|26190|F-box and WD repeat domain containing 2##AF145024|FBXW2|26190|F-box and WD repeat domain containing 2##AF193594|FBXW2|26190|F-box and WD repeat domain containing 2##BC000239|FBXW2|26190|F-box and WD repeat domain containing 2##BC018738|FBXW2|26190|F-box and WD repeat domain containing 2##AK300066|FBXW2|26190|F-box and WD repeat domain containing 2##AK314385|FBXW2|26190|F-box and WD repeat domain containing 2##AK022484|FBXW2|26190|F-box and WD repeat domain containing 2##NM_012164|FBXW2|26190|F-box and WD repeat domain containing 2	0.549707	CTCF.p2:-23:0.550
chr9	97385674	97385775	reg1025907.p2	5.773	+	CR536483 HQ258389 BC113632 BC117477 NM_003837 Y10812	-29684	-	TSC_hg19_v1_chr9_+_97136850 NM_032558	-248891	+	HQ258506 BC130390 BC143798 NM_017561	-294810	-	AF073475 CU680450 D26054 D26055 D26056 AY544122 TSC_hg19_v1_chr9_-_97401681	15912	-	TSC_hg19_v1_chr9_-_97401794 BC012927 M19922	16062	-	TSC_hg19_v1_chr9_-_97401835 AK223395 AK316583 NM_000507	16164	-	CR536483|FBP2|8789|fructose-1,6-bisphosphatase 2##HQ258389|FBP2|8789|fructose-1,6-bisphosphatase 2##BC113632|FBP2|8789|fructose-1,6-bisphosphatase 2##BC117477|FBP2|8789|fructose-1,6-bisphosphatase 2##NM_003837|FBP2|8789|fructose-1,6-bisphosphatase 2##Y10812|FBP2|8789|fructose-1,6-bisphosphatase 2##NM_032558|HIATL1|84641|hippocampus abundant transcript-like 1##HQ258506|FAM22F|54754|family with sequence similarity 22, member F##BC130390|FAM22F|54754|family with sequence similarity 22, member F##BC143798|FAM22F|54754|family with sequence similarity 22, member F##NM_017561|FAM22F|54754|family with sequence similarity 22, member F##AF073475|FBP1|2203|fructose-1,6-bisphosphatase 1##D26054|FBP1|2203|fructose-1,6-bisphosphatase 1##D26055|FBP1|2203|fructose-1,6-bisphosphatase 1##D26056|FBP1|2203|fructose-1,6-bisphosphatase 1##AY544122|FBP1|2203|fructose-1,6-bisphosphatase 1##BC012927|FBP1|2203|fructose-1,6-bisphosphatase 1##M19922|FBP1|2203|fructose-1,6-bisphosphatase 1##AK223395|FBP1|2203|fructose-1,6-bisphosphatase 1##AK316583|FBP1|2203|fructose-1,6-bisphosphatase 1##NM_000507|FBP1|2203|fructose-1,6-bisphosphatase 1	0.041448	
chr14	60632171	60632294	reg1025151.p2	5.772	+	TSC_hg19_v1_chr14_-_60632103 BC007337 AF151844 AK313285 AL117420 NM_016029	-98	-	AY359031 TSC_hg19_v1_chr14_-_60632031 BC000637	-200	-	NM_022495 TSC_hg19_v1_chr14_+_60558640 AK095489	-73405	+	AK097843 NM_177952 AK313337	80239	+	TSC_hg19_v1_chr14_+_60715965 NM_021003 NM_177951	83726	+	TSC_hg19_v1_chr14_+_60715993 S87759 BC026691 AF070670 BC063243 AK308225	83879	+	BC007337|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AF151844|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AK313285|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AL117420|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_016029|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AY359031|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC000637|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_022495|C14orf135|64430|chromosome 14 open reading frame 135##AK095489|C14orf135|64430|chromosome 14 open reading frame 135##AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_021003|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_177951|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##S87759|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC026691|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AF070670|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC063243|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AK308225|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	0.074199	
chr17	62294193	62294361	reg1025075.p2	5.772	+	AF059198 AB209869 TSC_hg19_v1_chr17_-_62207502 NM_001433 AK292403	-86761	-	TSC_hg19_v1_chr17_-_62207401 AB385116 BC130405 BC130407	-86879	-	TSC_hg19_v1_chr17_-_62097985 AK295382 AK309953 NM_001099786 NM_001099787 NM_001099788 NM_001099789	-196295	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	46309	-	TSC_hg19_v1_chr17_-_62340645 BC036672	46370	-	BC040522 NM_018469 TSC_hg19_v1_chr17_-_62340654	46377	-	AF059198|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AB209869|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##NM_001433|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK292403|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130405|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130407|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK295382|ICAM2|3384|intercellular adhesion molecule 2##NM_001099786|ICAM2|3384|intercellular adhesion molecule 2##NM_001099787|ICAM2|3384|intercellular adhesion molecule 2##NM_001099788|ICAM2|3384|intercellular adhesion molecule 2##NM_001099789|ICAM2|3384|intercellular adhesion molecule 2##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2##BC036672|TEX2|55852|testis expressed 2##BC040522|TEX2|55852|testis expressed 2##NM_018469|TEX2|55852|testis expressed 2	0.869011	CTCF.p2:-28:0.857
chr22	17695023	17695147	reg1026798.p1	5.772	+	AF190746 NM_017424	-4307	-	TSC_hg19_v1_chr22_-_17680487 AK027682 AK074702 NM_177405	-14571	-	AF273270 NM_017829	-48909	-	AK314321 TSC_hg19_v1_chr22_-_17700267 AK295174 AK292689	5278	-	TSC_hg19_v1_chr22_-_17747522 AF277398	52486	-	TSC_hg19_v1_chr22_+_18043149 AJ428203 AY008285 NM_031481 BC031644 AK308974 AK095706 AK309110	348134	+	AF190746|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_017424|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK027682|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK074702|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_177405|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF273270|CECR5|27440|cat eye syndrome chromosome region, candidate 5##NM_017829|CECR5|27440|cat eye syndrome chromosome region, candidate 5##AK314321|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK295174|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK292689|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF277398|CECR3|27442|cat eye syndrome chromosome region, candidate 3 (non-protein coding)##AJ428203|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AY008285|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##NM_031481|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BC031644|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK308974|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK095706|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK309110|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18	0.331794	CTCF.p2:-19:0.332
chr6_qbl_hap6	288407	288535	reg1025899.p2	5.772	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999391	CTCF.p2:1:0.999
chr8	96531601	96531690	reg1021353.p1	5.772	+	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	-250180	-	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	-250594	+	TSC_hg19_v1_chr8_+_96146116 AK023249	-385509	+	BC127948 BC127947 AJ537424 NM_001001557	641336	-	CR542176 CR542196 TSC_hg19_v1_chr8_-_97247774 AK307085 NM_001199975 BC041005 AK295007 AK311756 M22348 X13585 M26700 BC005230 NM_006294	716164	-	BC012995 NM_015942 TSC_hg19_v1_chr8_-_97273837 AK309002	742172	-	BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6##CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_001199975|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC012995|MTERFD1|51001|MTERF domain containing 1##NM_015942|MTERFD1|51001|MTERF domain containing 1##AK309002|MTERFD1|51001|MTERF domain containing 1	0.468413	CTCF.p2:0:0.468
chr1	193307339	193307454	reg1022571.p1	5.771	+	AF288390 BC022507 NM_003783	-151664	-	TSC_hg19_v1_chr1_+_193091308 BC007325 AF312865 AK314772 AB590625 CU688012 EU831787 EU831865 BC011808	-216040	+	TSC_hg19_v1_chr1_+_193091242 AK300929 BC065037	-216157	+	EU251076 BC103947 BC103948 BC103949 BC103950 AY359444 NM_198503 BX647852 AK309729 TSC_hg19_v1_chr1_-_196577612	3270129	-	TSC_hg19_v1_chr1_-_196577676 AK131498	3270286	-	NM_000186 NM_001014975 TSC_hg19_v1_chr1_+_196621172 AK291395 AK225649 X07523 Y00716 BC037285 BC012610 BC110643 BC073982 BC142699 CU691466	3313731	+	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC007325|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF312865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK314772|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831787|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK300929|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC065037|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU251076|KCNT2|343450|potassium channel, subfamily T, member 2##BC103947|KCNT2|343450|potassium channel, subfamily T, member 2##BC103948|KCNT2|343450|potassium channel, subfamily T, member 2##BC103949|KCNT2|343450|potassium channel, subfamily T, member 2##BC103950|KCNT2|343450|potassium channel, subfamily T, member 2##AY359444|KCNT2|343450|potassium channel, subfamily T, member 2##NM_198503|KCNT2|343450|potassium channel, subfamily T, member 2##BX647852|KCNT2|343450|potassium channel, subfamily T, member 2##AK309729|KCNT2|343450|potassium channel, subfamily T, member 2##AK131498|KCNT2|343450|potassium channel, subfamily T, member 2##NM_000186|CFH|3075|complement factor H##NM_001014975|CFH|3075|complement factor H##AK291395|CFH|3075|complement factor H##AK225649|CFH|3075|complement factor H##X07523|CFH|3075|complement factor H##Y00716|CFH|3075|complement factor H##BC037285|CFH|3075|complement factor H##BC012610|CFH|3075|complement factor H##BC110643|CFH|3075|complement factor H##BC073982|CFH|3075|complement factor H##BC142699|CFH|3075|complement factor H	0.345537	CTCF.p2:18:0.346
chr1	46216478	46216612	reg1023892.p2	5.771	+	BC032544 TSC_hg19_v1_chr1_-_46216325 AK023880 NM_001145349 NM_005897	-146	-	NM_016486 TSC_hg19_v1_chr1_+_46153865 AK024682 AK308613 BC104636 BC064539 BC013608 AF151063 BC034147 BC046130 BC121117 BC133692	-62670	+	TSC_hg19_v1_chr1_-_46152195 BC068578 NM_021639	-64303	-	TSC_hg19_v1_chr1_+_46269283 AB047005 NM_015112 BC065499	52753	+	TSC_hg19_v1_chr1_+_46379267 AK027123 AK309510	162717	+	TSC_hg19_v1_chr1_-_46598298 CR749649 BC021622 NM_003629 EU832448 EU832531 BX537388 BC094768 AK313726 NM_001114172	381933	-	BC032544|IPP|3652|intracisternal A particle-promoted polypeptide##AK023880|IPP|3652|intracisternal A particle-promoted polypeptide##NM_001145349|IPP|3652|intracisternal A particle-promoted polypeptide##NM_005897|IPP|3652|intracisternal A particle-promoted polypeptide##NM_016486|TMEM69|51249|transmembrane protein 69##AK024682|TMEM69|51249|transmembrane protein 69##BC104636|TMEM69|51249|transmembrane protein 69##BC064539|TMEM69|51249|transmembrane protein 69##BC013608|TMEM69|51249|transmembrane protein 69##AF151063|TMEM69|51249|transmembrane protein 69##BC034147|TMEM69|51249|transmembrane protein 69##BC046130|TMEM69|51249|transmembrane protein 69##BC121117|TMEM69|51249|transmembrane protein 69##BC133692|TMEM69|51249|transmembrane protein 69##BC068578|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1##NM_021639|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1##AB047005|MAST2|23139|microtubule associated serine/threonine kinase 2##NM_015112|MAST2|23139|microtubule associated serine/threonine kinase 2##BC065499|MAST2|23139|microtubule associated serine/threonine kinase 2##AK027123|MAST2|23139|microtubule associated serine/threonine kinase 2##AK309510|MAST2|23139|microtubule associated serine/threonine kinase 2##CR749649|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BC021622|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_003629|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##EU832448|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##EU832531|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BX537388|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BC094768|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##AK313726|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_001114172|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)	0.0	
chr18	9684159	9684264	reg1024927.p2	5.771	+	AK027064 TSC_hg19_v1_chr18_-_9614566 BC060829 AK315106 AF111106 NM_001042388 NM_005134	-69634	-	TSC_hg19_v1_chr18_-_9614547 AF200478 AK293869 AK292538	-69707	-	TSC_hg19_v1_chr18_+_9475545 NM_006788 BC013126	-208614	+	TSC_hg19_v1_chr18_+_9708217 AF234995 NM_006868	23998	+	AK314809 TSC_hg19_v1_chr18_+_9708269	24059	+	TSC_hg19_v1_chr18_+_9708299 BC001148	24091	+	AK027064|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##BC060829|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK315106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF111106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_001042388|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_005134|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF200478|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK293869|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK292538|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_006788|RALBP1|10928|ralA binding protein 1##BC013126|RALBP1|10928|ralA binding protein 1##AF234995|RAB31|11031|RAB31, member RAS oncogene family##NM_006868|RAB31|11031|RAB31, member RAS oncogene family##AK314809|RAB31|11031|RAB31, member RAS oncogene family##BC001148|RAB31|11031|RAB31, member RAS oncogene family	0.383201	CTCF.p2:0:0.383
chr5	153900615	153900771	reg1025354.p1	5.771	+	TSC_hg19_v1_chr5_-_153857823 AF061756 NM_004821	-42871	-	TSC_hg19_v1_chr5_-_153857790 BC021190	-42905	-	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	-75083	+	BC001460 NM_015315 CU674716	191780	+	TSC_hg19_v1_chr5_+_154134891 AB018274	234202	+	TSC_hg19_v1_chr5_+_154135038 AK091465 AX747001	234388	+	AF061756|HAND1|9421|heart and neural crest derivatives expressed 1##NM_004821|HAND1|9421|heart and neural crest derivatives expressed 1##BC021190|HAND1|9421|heart and neural crest derivatives expressed 1##AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like##BC001460|LARP1|23367|La ribonucleoprotein domain family, member 1##NM_015315|LARP1|23367|La ribonucleoprotein domain family, member 1##AB018274|LARP1|23367|La ribonucleoprotein domain family, member 1##AK091465|LARP1|23367|La ribonucleoprotein domain family, member 1	0.927494	CTCF.p2:-21:0.927
chr6	153380997	153381108	reg1025083.p1	5.771	+	TSC_hg19_v1_chr6_-_153323873 AK297671 NM_001114184 NM_019041	-57155	-	TSC_hg19_v1_chr6_-_153323849 AK095240	-57194	-	TSC_hg19_v1_chr6_-_153323845 BC105973 BC011873	-57209	-	BC013117 NM_012419 AF202257 TSC_hg19_v1_chr6_-_153452453	71368	-	AB055767 TSC_hg19_v1_chr6_-_153603892	222839	-	DQ680044 NM_001145279 NM_001145280 EU340241 EU340242 EU340243 NM_001145281	950580	+	AK297671|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_001114184|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_019041|MTRF1L|54516|mitochondrial translational release factor 1-like##AK095240|MTRF1L|54516|mitochondrial translational release factor 1-like##BC105973|MTRF1L|54516|mitochondrial translational release factor 1-like##BC011873|MTRF1L|54516|mitochondrial translational release factor 1-like##BC013117|RGS17|26575|regulator of G-protein signaling 17##NM_012419|RGS17|26575|regulator of G-protein signaling 17##AF202257|RGS17|26575|regulator of G-protein signaling 17##DQ680044|OPRM1|4988|opioid receptor, mu 1##NM_001145279|OPRM1|4988|opioid receptor, mu 1##NM_001145280|OPRM1|4988|opioid receptor, mu 1##EU340241|OPRM1|4988|opioid receptor, mu 1##EU340242|OPRM1|4988|opioid receptor, mu 1##EU340243|OPRM1|4988|opioid receptor, mu 1##NM_001145281|OPRM1|4988|opioid receptor, mu 1	0.982748	CTCF.p2:-7:0.983
chr12	84891717	84891846	reg1022876.p1	5.770	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	-1810520	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	-1810864	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	-1811081	+	AK291207 AK022853 TSC_hg19_v1_chr12_-_85306547	414762	-	TSC_hg19_v1_chr12_-_85306575 BC022253 BC070040	414791	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	414811	-	AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK291207|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK022853|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC022253|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC070040|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15	0.749814	CTCF.p2:11:0.750
chr14	77494281	77494427	reg1025487.p1	5.770	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-201559	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-215092	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-215144	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	330	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	706	-	AK124327 TSC_hg19_v1_chr14_-_77542533	48179	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.0	
chr15	79322940	79323062	reg1024802.p2	5.770	+	NM_153815 S62035	-25000	-	TSC_hg19_v1_chr15_-_79237389 AL110099 BC002479 BC018821 AK309491 AK314698 D28436 AK130158 NM_004390	-85602	-	TSC_hg19_v1_chr15_-_79237350 AF426247 AF426248 CR456881 CU677980 DQ890683 DQ893772 AK295583 X16832	-85666	-	L26584 CU691844 AB385192 TSC_hg19_v1_chr15_-_79382954	59898	-	AK290135 TSC_hg19_v1_chr15_-_79383114 BC040275 NM_001145648 NM_002891	60147	-	AK127037 NM_001146341	252144	+	NM_153815|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##S62035|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AL110099|CTSH|1512|cathepsin H##BC002479|CTSH|1512|cathepsin H##BC018821|CTSH|1512|cathepsin H##AK309491|CTSH|1512|cathepsin H##AK314698|CTSH|1512|cathepsin H##D28436|CTSH|1512|cathepsin H##AK130158|CTSH|1512|cathepsin H##NM_004390|CTSH|1512|cathepsin H##AF426247|CTSH|1512|cathepsin H##AF426248|CTSH|1512|cathepsin H##CR456881|CTSH|1512|cathepsin H##DQ890683|CTSH|1512|cathepsin H##DQ893772|CTSH|1512|cathepsin H##X16832|CTSH|1512|cathepsin H##L26584|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK290135|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##BC040275|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_001145648|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_002891|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK127037|ANKRD34C|390616|ankyrin repeat domain 34C##NM_001146341|ANKRD34C|390616|ankyrin repeat domain 34C	0.996425	CTCF.p2:4:0.996
chr6_mann_hap4	288411	288539	reg1025898.p2	5.770	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999391	CTCF.p2:1:0.999
chr12	56099716	56099857	reg1029475.p1	5.769	+	BC020509 TSC_hg19_v1_chr12_+_56075425 AY358508	-24347	+	AK290112 NM_152637 TSC_hg19_v1_chr12_+_56075356	-24443	+	BC136914 AB529283 NM_206899	-69127	+	AF052050 AF072132 AY358882 TSC_hg19_v1_chr12_-_56101636 AF032108 AB210036	1774	-	TSC_hg19_v1_chr12_-_56101689 BC050280 NM_001144996 NM_002206	1897	-	TSC_hg19_v1_chr12_-_56106061 AK304864 NM_001144997	6288	-	BC020509|METTL7B|196410|methyltransferase like 7B##AY358508|METTL7B|196410|methyltransferase like 7B##AK290112|METTL7B|196410|methyltransferase like 7B##NM_152637|METTL7B|196410|methyltransferase like 7B##BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1##NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1##AF052050|ITGA7|3679|integrin, alpha 7##AF072132|ITGA7|3679|integrin, alpha 7##AY358882|ITGA7|3679|integrin, alpha 7##AF032108|ITGA7|3679|integrin, alpha 7##AB210036|ITGA7|3679|integrin, alpha 7##BC050280|ITGA7|3679|integrin, alpha 7##NM_001144996|ITGA7|3679|integrin, alpha 7##NM_002206|ITGA7|3679|integrin, alpha 7##AK304864|ITGA7|3679|integrin, alpha 7##NM_001144997|ITGA7|3679|integrin, alpha 7	0.950125	CTCF.p2:-7:0.950
chr12	93002390	93002523	reg1025410.p1	5.769	+	AJ845168 NM_001025232	-180533	-	AJ845165 AJ845166 NM_001025233	-184722	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-462813	-	NM_001037671 NM_001178097	94162	+	NM_001004330 AK128530	127831	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	320482	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.91768	CTCF.p2:-7:0.918
chr2	241505871	241505953	reg1021107.p2	5.769	+	TSC_hg19_v1_chr2_-_241500482 AK056511 AK296714	-5418	-	TSC_hg19_v1_chr2_-_241500194 CR936600 AL136618 CR936759	-5731	-	NM_001033575	-6442	+	TSC_hg19_v1_chr2_+_241507945 NM_018226	2053	+	BC082975 TSC_hg19_v1_chr2_+_241508114	2196	+	TSC_hg19_v1_chr2_+_241526150 NM_023083 NM_023085 AK300279 AF089088 AK074807 BC004260 BC007553 AF089095 AB058748 AF089090 AF089091 AF089092 AF089093 AF089094 AF089096 AB590370 DQ893519 DQ896503	20317	+	AK056511|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK296714|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##CR936600|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AL136618|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##CR936759|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_001033575|DUSP28|285193|dual specificity phosphatase 28##NM_018226|RNPEPL1|57140|arginyl aminopeptidase (aminopeptidase B)-like 1##BC082975|RNPEPL1|57140|arginyl aminopeptidase (aminopeptidase B)-like 1##NM_023083|CAPN10|11132|calpain 10##NM_023085|CAPN10|11132|calpain 10##AK300279|CAPN10|11132|calpain 10##AF089088|CAPN10|11132|calpain 10##AK074807|CAPN10|11132|calpain 10##BC004260|CAPN10|11132|calpain 10##BC007553|CAPN10|11132|calpain 10##AB058748|CAPN10|11132|calpain 10##AF089090|CAPN10|11132|calpain 10##AF089091|CAPN10|11132|calpain 10##AF089092|CAPN10|11132|calpain 10##AF089093|CAPN10|11132|calpain 10##AF089094|CAPN10|11132|calpain 10##AF089096|CAPN10|11132|calpain 10##DQ893519|CAPN10|11132|calpain 10##DQ896503|CAPN10|11132|calpain 10	0.949399	CTCF.p2:31:0.949
chr10	28683004	28683127	reg1026059.p1	5.768	+	TSC_hg19_v1_chr10_-_28591994 AK315046 AK301592	-91133	-	BC038105 AK057360 NM_173496	-112025	-	AK292521 TSC_hg19_v1_chr10_-_28287879 AK001679 NM_018076 BC085611	-395181	-	BC043365 TSC_hg19_v1_chr10_-_28821677	138530	-	AK055852 TSC_hg19_v1_chr10_+_28821707 AK225846	138641	+	BC001026 TSC_hg19_v1_chr10_+_28821734	138664	+	AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK292521|ARMC4|55130|armadillo repeat containing 4##AK001679|ARMC4|55130|armadillo repeat containing 4##NM_018076|ARMC4|55130|armadillo repeat containing 4##BC085611|ARMC4|55130|armadillo repeat containing 4##BC043365|LOC220906|220906|uncharacterized LOC220906##AK055852|WAC|51322|WW domain containing adaptor with coiled-coil##AK225846|WAC|51322|WW domain containing adaptor with coiled-coil	0.998078	CTCF.p2:14:0.998
chr16	70490002	70490113	reg1024591.p1	5.768	+	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	-1558	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	-17076	-	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-109229	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	12783	+	BC027726 AB088369 BC128144 BC128145 AK022874 BC072438 TSC_hg19_v1_chr16_-_70557452 BX648010 AK293235 AK297557 AK096557 NM_001195139 NM_015386	67387	-	TSC_hg19_v1_chr16_+_70557713 NM_012426 AK291768	67643	+	AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK096727|FUK|197258|fucokinase##BC027726|COG4|25839|component of oligomeric golgi complex 4##AB088369|COG4|25839|component of oligomeric golgi complex 4##BC128144|COG4|25839|component of oligomeric golgi complex 4##BC128145|COG4|25839|component of oligomeric golgi complex 4##AK022874|COG4|25839|component of oligomeric golgi complex 4##BC072438|COG4|25839|component of oligomeric golgi complex 4##BX648010|COG4|25839|component of oligomeric golgi complex 4##AK293235|COG4|25839|component of oligomeric golgi complex 4##AK297557|COG4|25839|component of oligomeric golgi complex 4##AK096557|COG4|25839|component of oligomeric golgi complex 4##NM_001195139|COG4|25839|component of oligomeric golgi complex 4##NM_015386|COG4|25839|component of oligomeric golgi complex 4##NM_012426|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##AK291768|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa	0.987922	CTCF.p2:-6:0.988
chr2	163190598	163190706	reg1021804.p1	5.768	+	CU692330 BC111750 AY017378 AF095844 NM_022168 BC078180 TSC_hg19_v1_chr2_-_163175195 BC046208 AK292941 AK314611	-15569	-	BC026250 AF007822 U76833 AK315448 AK309260 AK297118 NM_004460 U09278	-90692	-	NM_002054	-181739	-	NM_012198 TSC_hg19_v1_chr2_+_163200610	9946	+	TSC_hg19_v1_chr2_+_163200633 AK312349 M81637 BC005214 AB209768 AB529141 CU675051 AK295413	10109	+	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	504472	-	BC111750|IFIH1|64135|interferon induced with helicase C domain 1##AY017378|IFIH1|64135|interferon induced with helicase C domain 1##AF095844|IFIH1|64135|interferon induced with helicase C domain 1##NM_022168|IFIH1|64135|interferon induced with helicase C domain 1##BC078180|IFIH1|64135|interferon induced with helicase C domain 1##BC046208|IFIH1|64135|interferon induced with helicase C domain 1##AK292941|IFIH1|64135|interferon induced with helicase C domain 1##AK314611|IFIH1|64135|interferon induced with helicase C domain 1##BC026250|FAP|2191|fibroblast activation protein, alpha##AF007822|FAP|2191|fibroblast activation protein, alpha##U76833|FAP|2191|fibroblast activation protein, alpha##AK315448|FAP|2191|fibroblast activation protein, alpha##AK309260|FAP|2191|fibroblast activation protein, alpha##AK297118|FAP|2191|fibroblast activation protein, alpha##NM_004460|FAP|2191|fibroblast activation protein, alpha##U09278|FAP|2191|fibroblast activation protein, alpha##NM_002054|GCG|2641|glucagon##NM_012198|GCA|25801|grancalcin, EF-hand calcium binding protein##AK312349|GCA|25801|grancalcin, EF-hand calcium binding protein##M81637|GCA|25801|grancalcin, EF-hand calcium binding protein##BC005214|GCA|25801|grancalcin, EF-hand calcium binding protein##AB209768|GCA|25801|grancalcin, EF-hand calcium binding protein##AK295413|GCA|25801|grancalcin, EF-hand calcium binding protein##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7	0.98104	CTCF.p2:33:0.981
chr2	225795753	225795867	reg1023553.p1	5.768	+	TSC_hg19_v1_chr2_-_225450116 NM_003590	-345690	-	TSC_hg19_v1_chr2_-_225450056 BC039598	-345735	-	TSC_hg19_v1_chr2_-_225450043 AB014517 BC092409	-345769	-	TSC_hg19_v1_chr2_-_225811768 EU236710	15944	-	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	111538	-	NM_020864 BC131727 AB040919	469835	+	NM_003590|CUL3|8452|cullin 3##BC039598|CUL3|8452|cullin 3##AB014517|CUL3|8452|cullin 3##BC092409|CUL3|8452|cullin 3##EU236710|DOCK10|55619|dedicator of cytokinesis 10##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2	0.60617	CTCF.p2:-2:0.516
chr2	241543770	241543949	reg1026132.p1	5.767	+	TSC_hg19_v1_chr2_+_241526150 NM_023083 NM_023085 AK300279 AF089088 AK074807 BC004260 BC007553 AF089095 AB058748 AF089090 AF089091 AF089092 AF089093 AF089094 AF089096 AB590370 DQ893519 DQ896503	-17630	+	BC082975 TSC_hg19_v1_chr2_+_241508114	-35751	+	TSC_hg19_v1_chr2_+_241507945 NM_018226	-35894	+	TSC_hg19_v1_chr2_+_241544846 NM_001195381 NM_001195382 AK172786 AK290256	981	+	AK314002 NM_005301	20802	+	BC157895 BC171912 BC139748 NM_001102467 BC041460	78456	-	NM_023083|CAPN10|11132|calpain 10##NM_023085|CAPN10|11132|calpain 10##AK300279|CAPN10|11132|calpain 10##AF089088|CAPN10|11132|calpain 10##AK074807|CAPN10|11132|calpain 10##BC004260|CAPN10|11132|calpain 10##BC007553|CAPN10|11132|calpain 10##AB058748|CAPN10|11132|calpain 10##AF089090|CAPN10|11132|calpain 10##AF089091|CAPN10|11132|calpain 10##AF089092|CAPN10|11132|calpain 10##AF089093|CAPN10|11132|calpain 10##AF089094|CAPN10|11132|calpain 10##AF089096|CAPN10|11132|calpain 10##DQ893519|CAPN10|11132|calpain 10##DQ896503|CAPN10|11132|calpain 10##BC082975|RNPEPL1|57140|arginyl aminopeptidase (aminopeptidase B)-like 1##NM_018226|RNPEPL1|57140|arginyl aminopeptidase (aminopeptidase B)-like 1##NM_001195381|GPR35|2859|G protein-coupled receptor 35##NM_001195382|GPR35|2859|G protein-coupled receptor 35##AK172786|GPR35|2859|G protein-coupled receptor 35##AK290256|GPR35|2859|G protein-coupled receptor 35##AK314002|GPR35|2859|G protein-coupled receptor 35##NM_005301|GPR35|2859|G protein-coupled receptor 35##BC157895|AQP12B|653437|aquaporin 12B##BC171912|AQP12B|653437|aquaporin 12B##BC139748|AQP12B|653437|aquaporin 12B##NM_001102467|AQP12B|653437|aquaporin 12B##BC041460|AQP12B|653437|aquaporin 12B	0.0	
chr6	159248188	159248368	reg1024094.p2	5.767	+	TSC_hg19_v1_chr6_-_159240446 NM_001111077	-7822	-	TSC_hg19_v1_chr6_-_159240401 AK296738	-7865	-	AK312597 TSC_hg19_v1_chr6_-_159240398	-7880	-	NM_001195032	61340	+	TSC_hg19_v1_chr6_-_159420766 BC035675	172491	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	172541	-	NM_001111077|EZR|7430|ezrin##AK296738|EZR|7430|ezrin##AK312597|EZR|7430|ezrin##NM_001195032|C6orf99|100130967|chromosome 6 open reading frame 99##BC035675|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)	0.0	
chr7	22336702	22336868	reg1018872.p4	5.767	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-351303	-	AJ320497 NM_003777	-753953	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-868461	+	AL833195 NM_012294	59736	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	203062	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	430038	+	AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)	0.0	
chr8	119121112	119121292	reg1025472.p2	5.767	+	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	-588160	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	-588244	+	NM_001172814 NM_173851	-973866	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	2759	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	512923	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	513005	-	BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##NM_080651|MED30|90390|mediator complex subunit 30##NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12	0.0	
chr7	74267871	74267985	reg1023684.p1	5.766	+	AY260739 AY312853 AY336980 BC047706 BC061590 AK225845 AY336979 BC136849 BC067859 AK291431 AY336981 BC038098 NM_173537 AK098269	-89	-	BC002816 NM_000265 BC065731 AK127905 AK223217 AK292094 AK316341 AK316552 AB590366 CU678218 DQ893150 DQ896445 U25793	-79576	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	-195806	+	TSC_hg19_v1_chr7_-_74306679 BC002581	38747	-	TSC_hg19_v1_chr7_-_74306685 AK303473 AK307228 AK309007	38755	-	TSC_hg19_v1_chr7_-_74306725 BC095487	38793	-	AY260739|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336980|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC047706|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC061590|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336979|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AY336981|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC038098|GTF2IRD2|84163|GTF2I repeat domain containing 2##NM_173537|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC002816|NCF1|653361|neutrophil cytosolic factor 1##NM_000265|NCF1|653361|neutrophil cytosolic factor 1##BC065731|NCF1|653361|neutrophil cytosolic factor 1##AK127905|NCF1|653361|neutrophil cytosolic factor 1##AK223217|NCF1|653361|neutrophil cytosolic factor 1##AK292094|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316341|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316552|NCF1|653361|neutrophil cytosolic factor 1##DQ893150|NCF1|653361|neutrophil cytosolic factor 1##DQ896445|NCF1|653361|neutrophil cytosolic factor 1##U25793|NCF1|653361|neutrophil cytosolic factor 1##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi##BC002581|STAG3L2|442582|stromal antigen 3-like 2##AK303473|STAG3L2|442582|stromal antigen 3-like 2##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2	0.0	
chr11	70317444	70317574	reg1025711.p1	5.765	+	TSC_hg19_v1_chr11_+_70244653 NM_001184740 NM_005231 NM_138565 AK222613 AK291097 BC033889 BC008799 M98343	-72856	+	TSC_hg19_v1_chr11_-_70244476 AK125463	-72994	-	D49354 TSC_hg19_v1_chr11_+_70194450	-123088	+	AF141901 BC114484 BC113876 TSC_hg19_v1_chr11_-_70507895	190358	-	TSC_hg19_v1_chr11_-_70507919 AB208027 NM_133266	190409	-	BC093885 BC112097 BC143389 TSC_hg19_v1_chr11_-_70507947	190441	-	NM_001184740|CTTN|2017|cortactin##NM_005231|CTTN|2017|cortactin##NM_138565|CTTN|2017|cortactin##AK222613|CTTN|2017|cortactin##AK291097|CTTN|2017|cortactin##BC033889|CTTN|2017|cortactin##BC008799|CTTN|2017|cortactin##M98343|CTTN|2017|cortactin##D49354|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##AF141901|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC114484|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC113876|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AB208027|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##NM_133266|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC093885|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC112097|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC143389|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2	0.249744	CTCF.p2:24:0.250
chr11	80948309	80948405	reg1023583.p1	5.765	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-1796633	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-2662462	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-2662565	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	1496541	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	1663160	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	1664417	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.986965	CTCF.p2:3:0.987
chr15	101555692	101555853	reg1002090.p2	5.765	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-96260	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-96298	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-135701	+	AB071402 TSC_hg19_v1_chr15_-_101791795	235964	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	236363	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	261891	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.0	
chr18	3454761	3454918	reg1024310.p1	5.765	+	NM_173211	-1068	+	TSC_hg19_v1_chr18_+_3451599 NM_170695 NM_173210 AK307230 BC031268	-3208	+	NM_173209 NM_173208 TSC_hg19_v1_chr18_+_3450174 NM_003244 AK309471 X89750	-4759	+	TSC_hg19_v1_chr18_+_3594077 AK093095 AX747919 BC137437	139303	+	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	390491	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	419445	-	NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1##NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1##BC031268|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1##NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1##AK309471|TGIF1|7050|TGFB-induced factor homeobox 1##X89750|TGIF1|7050|TGFB-induced factor homeobox 1##AK093095|FLJ35776|649446|uncharacterized LOC649446##BC137437|FLJ35776|649446|uncharacterized LOC649446##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	0.968689	CTCF.p2:40:0.969
chr1	94505183	94505324	reg1025569.p1	5.765	+	TSC_hg19_v1_chr1_-_94375075 AK290449	-130163	-	TSC_hg19_v1_chr1_-_94374987 NM_002061	-130249	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	-130291	-	AF001945 U88667 AK295818 AF000148 AB210040 DQ426859 NM_000350	81438	-	TSC_hg19_v1_chr1_-_94703141 BC093767 U90920 AK307733 BC022483	197811	-	TSC_hg19_v1_chr1_-_94703252 BC067839 NM_004815	198026	-	AK290449|GCLM|2730|glutamate-cysteine ligase, modifier subunit##NM_002061|GCLM|2730|glutamate-cysteine ligase, modifier subunit##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit##AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##BC093767|ARHGAP29|9411|Rho GTPase activating protein 29##U90920|ARHGAP29|9411|Rho GTPase activating protein 29##AK307733|ARHGAP29|9411|Rho GTPase activating protein 29##BC022483|ARHGAP29|9411|Rho GTPase activating protein 29##BC067839|ARHGAP29|9411|Rho GTPase activating protein 29##NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29	0.999199	CTCF.p2:-5:0.999
chr9	33720192	33720319	reg1024598.p1	5.765	+	TSC_hg19_v1_chr9_+_33624216 M62898	-96037	+	NM_001244752	-195845	+	TSC_hg19_v1_chr9_-_33473921 NM_022917 NM_139235	-246325	-	AB298285 NM_001197097 NM_007343 AB528734 X71345 X72781 TSC_hg19_v1_chr9_+_33750676 BC030238 AY052783 AB298286 NM_001197098	30385	+	BC069476 BC069494 NM_002771 X15505 D45417	75309	+	TSC_hg19_v1_chr9_+_33817170 NM_017811	96929	+	M62898|ANXA2P2|304|annexin A2 pseudogene 2##NM_001244752|ANKRD18B|441459|ankyrin repeat domain 18B##NM_022917|NOL6|65083|nucleolar protein family 6 (RNA-associated)##NM_139235|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AB298285|PRSS3|5646|protease, serine, 3##NM_001197097|PRSS3|5646|protease, serine, 3##NM_007343|PRSS3|5646|protease, serine, 3##X71345|PRSS3|5646|protease, serine, 3##X72781|PRSS3|5646|protease, serine, 3##BC030238|PRSS3|5646|protease, serine, 3##AY052783|PRSS3|5646|protease, serine, 3##AB298286|PRSS3|5646|protease, serine, 3##NM_001197098|PRSS3|5646|protease, serine, 3##BC069476|PRSS3|5646|protease, serine, 3##BC069494|PRSS3|5646|protease, serine, 3##NM_002771|PRSS3|5646|protease, serine, 3##X15505|PRSS3|5646|protease, serine, 3##D45417|PRSS3|5646|protease, serine, 3##NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2	0.056191	
chr16	11448725	11448897	reg1023302.p1	5.764	+	TSC_hg19_v1_chr16_+_11439315 BC013040	-9493	+	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	-9517	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-73669	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	231376	-	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	231978	-	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	313487	+	BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin	0.0	
chr17	68164295	68164407	reg1025370.p1	5.764	+	BC033038 NM_170742	-63357	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-92921	+	TSC_hg19_v1_chr17_+_67498396 U39064	-665871	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	1345	+	TSC_hg19_v1_chr17_-_70116937 AL833139	1952587	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	1952808	+	BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9	0.024246	
chr20	52302614	52302758	reg1025525.p1	5.764	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-91887	-	AF041259 NM_006526	-103051	-	AK302570 NM_001193421	-500865	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	384376	-	AK315220 NM_003657	384617	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	487834	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.238047	
chr4	36350362	36350511	reg1024857.p2	5.764	+	BC157885 NM_001170700	-64793	+	AK131492 NM_001136536 AK304357 AK316523	-67190	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	-104399	-	NM_001144990	896253	+	NM_001104629 BC037906	1105139	+	AK001879 NM_018302 AK225192	1235433	+	BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_001144990|KIAA1239|57495|KIAA1239##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19	0.0	
chr5	77163033	77163213	reg1024350.p1	5.764	+	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	-90991	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	-228609	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	-228694	-	BC113045 CU691576 DQ894915 EU176289 TSC_hg19_v1_chr5_-_77590458 AK225908 U91931	427302	-	TSC_hg19_v1_chr5_-_77590488 AY623424 AK303300	427354	-	TSC_hg19_v1_chr5_-_77590495 U81504	427369	-	BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##EU446696|OTP|23440|orthopedia homeobox##DQ894915|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##EU176289|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK225908|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U91931|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AY623424|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK303300|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U81504|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit	0.51652	CTCF.p2:-7:0.517
chr7	13564848	13565011	reg1025858.p2	5.764	+	TSC_hg19_v1_chr7_+_12727257 AK313233 U73960	-837683	+	NM_001195396 NM_005738	-838019	+	TSC_hg19_v1_chr7_+_12726499 NM_001037164 NM_212460 BC039123 BC001111 BC003027	-838443	+	AK293802 AK311134 AK311194 CR627389 AK294572 AK311707 AK316007 AK299693 NM_001163150 NM_001163151 NM_001163152	461053	-	TSC_hg19_v1_chr7_-_14029292 AB209202 BC098403 AK312863	464375	-	NM_001163147 NM_004956	464712	-	AK313233|ARL4A|10124|ADP-ribosylation factor-like 4A##U73960|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_001195396|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_005738|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_001037164|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_212460|ARL4A|10124|ADP-ribosylation factor-like 4A##BC039123|ARL4A|10124|ADP-ribosylation factor-like 4A##BC001111|ARL4A|10124|ADP-ribosylation factor-like 4A##BC003027|ARL4A|10124|ADP-ribosylation factor-like 4A##AK293802|ETV1|2115|ets variant 1##AK311134|ETV1|2115|ets variant 1##AK311194|ETV1|2115|ets variant 1##CR627389|ETV1|2115|ets variant 1##AK294572|ETV1|2115|ets variant 1##AK311707|ETV1|2115|ets variant 1##AK316007|ETV1|2115|ets variant 1##AK299693|ETV1|2115|ets variant 1##NM_001163150|ETV1|2115|ets variant 1##NM_001163151|ETV1|2115|ets variant 1##NM_001163152|ETV1|2115|ets variant 1##AB209202|ETV1|2115|ets variant 1##BC098403|ETV1|2115|ets variant 1##AK312863|ETV1|2115|ets variant 1##NM_001163147|ETV1|2115|ets variant 1##NM_004956|ETV1|2115|ets variant 1	0.992618	CTCF.p2:-13:0.993
chr9	37411476	37411596	reg1024243.p1	5.764	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-290953	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-291028	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-291050	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	11170	+	BC010007 TSC_hg19_v1_chr9_-_37465267	53724	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	53859	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	1.003317	CTCF.p2:-69:0.991
chr16	49547126	49547255	reg1026404.p1	5.763	+	BC021181 BC021718 NM_144602 CU676858	-139362	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-231456	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	-231690	-	NM_015069	313727	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	511950	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	552703	+	BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##NM_015069|ZNF423|23090|zinc finger protein 423##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3	0.211332	CTCF.p2:-34:0.211
chr3	58306793	58306973	reg1022741.p1	5.763	+	AK311396 TSC_hg19_v1_chr3_+_58292265 AK311969	-14622	+	TSC_hg19_v1_chr3_+_58292022 BC012017 BC002441 BC007342	-14866	+	TSC_hg19_v1_chr3_+_58292000 AF001175	-14883	+	TSC_hg19_v1_chr3_+_58318618 AY274811 NM_017771 AK000342 AK295542	11730	+	TSC_hg19_v1_chr3_+_58318663 BC008943 AB209688 AK131385 AY437879 AK296215 BC014479 AY847220 AY847221 AY847222 AF399753 CU677017 DQ124707 DQ124708	11791	+	M34056 M19123 BC004115 AB528205 AM392999 AM393278 CR541911 CU674222 DQ891366 DQ894546 M34479 M34055 M54788 AB209241 AL117618 AK293153 BC000439 BC001924 TSC_hg19_v1_chr3_-_58419557 AK225569 AK311514 AK313022 J03576 X57778 AK225621 NM_000925 NM_001173468	112599	-	AK311396|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AK311969|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC012017|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC002441|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC007342|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AF001175|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AY274811|PXK|54899|PX domain containing serine/threonine kinase##NM_017771|PXK|54899|PX domain containing serine/threonine kinase##AK000342|PXK|54899|PX domain containing serine/threonine kinase##AK295542|PXK|54899|PX domain containing serine/threonine kinase##BC008943|PXK|54899|PX domain containing serine/threonine kinase##AB209688|PXK|54899|PX domain containing serine/threonine kinase##AK131385|PXK|54899|PX domain containing serine/threonine kinase##AY437879|PXK|54899|PX domain containing serine/threonine kinase##AK296215|PXK|54899|PX domain containing serine/threonine kinase##BC014479|PXK|54899|PX domain containing serine/threonine kinase##AY847220|PXK|54899|PX domain containing serine/threonine kinase##AY847221|PXK|54899|PX domain containing serine/threonine kinase##AY847222|PXK|54899|PX domain containing serine/threonine kinase##AF399753|PXK|54899|PX domain containing serine/threonine kinase##DQ124707|PXK|54899|PX domain containing serine/threonine kinase##DQ124708|PXK|54899|PX domain containing serine/threonine kinase##M34056|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M19123|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC004115|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM392999|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM393278|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##CR541911|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ891366|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ894546|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34479|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34055|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M54788|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AB209241|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AL117618|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK293153|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC000439|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC001924|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225569|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK311514|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK313022|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##J03576|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##X57778|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225621|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_000925|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_001173468|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta	0.861796	CTCF.p2:-7:0.862
chrX	152726440	152726574	reg1026346.p1	5.763	+	NM_080701	-14563	-	NM_001136273	-42727	+	TSC_hg19_v1_chrX_+_152599610 AK122976 NM_001080485	-126898	+	CU675933 TSC_hg19_v1_chrX_-_152736028 AF267739 AK302066 AK300650 AF319570 AF319571 AF319572 AF319573 AB464338 AM393157 DQ891762 DQ894946 BC008141	9544	-	NM_017518	10095	-	NM_001711 TSC_hg19_v1_chrX_+_152760437 AK293289 AK293268 AK222484 AK291955 AK297966 AK092954 AX747825 AK093023 AX747863	33889	+	NM_080701|TREX2|11219|three prime repair exonuclease 2##NM_001136273|ZFP92|139735|zinc finger protein 92 homolog (mouse)##AK122976|ZNF275|10838|zinc finger protein 275##NM_001080485|ZNF275|10838|zinc finger protein 275##AF267739|HAUS7|55559|HAUS augmin-like complex, subunit 7##AK302066|HAUS7|55559|HAUS augmin-like complex, subunit 7##AK300650|HAUS7|55559|HAUS augmin-like complex, subunit 7##AM393157|HAUS7|55559|HAUS augmin-like complex, subunit 7##DQ891762|TREX2|11219|three prime repair exonuclease 2##DQ894946|HAUS7|55559|HAUS augmin-like complex, subunit 7##BC008141|HAUS7|55559|HAUS augmin-like complex, subunit 7##NM_017518|HAUS7|55559|HAUS augmin-like complex, subunit 7##NM_001711|BGN|633|biglycan##AK293289|BGN|633|biglycan##AK293268|BGN|633|biglycan##AK222484|BGN|633|biglycan##AK291955|BGN|633|biglycan##AK297966|BGN|633|biglycan##AK092954|BGN|633|biglycan##AK093023|BGN|633|biglycan	0.909158	CTCF.p2:-16:0.909
chr6	30883414	30883542	reg1026374.p2	5.762	+	AB067472 NM_001167733 NM_020442 AK303415 AK293780 AK294451 AK000511 AK304807 NM_001167734	-1434	+	AK309869 NM_001517 AK298058 AK300239 BC004935 BC016302 Y07595 AK222607	-7460	+	X74979 NM_001202521 NM_001202522 NM_013994 AB463012 CU687028 EU826613 EU826614	-26994	+	AY102070 AY359057 BC039677 NM_205854	16460	-	NM_080870	25298	+	NM_001010909 AK299471 AK316363 AK298642 AY358415 BC105735 BC105736 BC105737 BC107478 HM596784 AB242595	68051	+	AB067472|VARS2|57176|valyl-tRNA synthetase 2, mitochondrial (putative)##NM_001167733|VARS2|57176|valyl-tRNA synthetase 2, mitochondrial (putative)##NM_020442|VARS2|57176|valyl-tRNA synthetase 2, mitochondrial (putative)##AK303415|VARS2|57176|valyl-tRNA synthetase 2, mitochondrial (putative)##AK293780|VARS2|57176|valyl-tRNA synthetase 2, mitochondrial (putative)##AK294451|VARS2|57176|valyl-tRNA synthetase 2, mitochondrial (putative)##AK000511|VARS2|57176|valyl-tRNA synthetase 2, mitochondrial (putative)##AK304807|VARS2|57176|valyl-tRNA synthetase 2, mitochondrial (putative)##NM_001167734|VARS2|57176|valyl-tRNA synthetase 2, mitochondrial (putative)##AK309869|GTF2H4|2968|general transcription factor IIH, polypeptide 4, 52kDa##NM_001517|GTF2H4|2968|general transcription factor IIH, polypeptide 4, 52kDa##AK298058|GTF2H4|2968|general transcription factor IIH, polypeptide 4, 52kDa##AK300239|GTF2H4|2968|general transcription factor IIH, polypeptide 4, 52kDa##BC004935|GTF2H4|2968|general transcription factor IIH, polypeptide 4, 52kDa##BC016302|GTF2H4|2968|general transcription factor IIH, polypeptide 4, 52kDa##Y07595|GTF2H4|2968|general transcription factor IIH, polypeptide 4, 52kDa##AK222607|GTF2H4|2968|general transcription factor IIH, polypeptide 4, 52kDa##X74979|DDR1|780|discoidin domain receptor tyrosine kinase 1##NM_001202521|DDR1|780|discoidin domain receptor tyrosine kinase 1##NM_001202522|DDR1|780|discoidin domain receptor tyrosine kinase 1##NM_013994|DDR1|780|discoidin domain receptor tyrosine kinase 1##EU826613|DDR1|780|discoidin domain receptor tyrosine kinase 1##EU826614|DDR1|780|discoidin domain receptor tyrosine kinase 1##AY102070|SFTA2|389376|surfactant associated 2##AY359057|SFTA2|389376|surfactant associated 2##BC039677|SFTA2|389376|surfactant associated 2##NM_205854|SFTA2|389376|surfactant associated 2##NM_080870|DPCR1|135656|diffuse panbronchiolitis critical region 1##NM_001010909|MUC21|394263|mucin 21, cell surface associated##AK316363|MUC21|394263|mucin 21, cell surface associated##AK298642|MUC21|394263|mucin 21, cell surface associated##AY358415|MUC21|394263|mucin 21, cell surface associated##BC105735|MUC21|394263|mucin 21, cell surface associated##BC105736|MUC21|394263|mucin 21, cell surface associated##BC105737|MUC21|394263|mucin 21, cell surface associated##BC107478|MUC21|394263|mucin 21, cell surface associated##HM596784|MUC21|394263|mucin 21, cell surface associated##AB242595|MUC21|394263|mucin 21, cell surface associated	0.51578	CTCF.p2:-15:0.516
chr7	23125757	23125887	reg1025248.p1	5.762	+	TSC_hg19_v1_chr7_-_23053750 BC018710 NM_032581	-72072	-	AB030241 AK056319 AK297399 TSC_hg19_v1_chr7_-_23053708 AL833296	-72127	-	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	-263379	-	TSC_hg19_v1_chr7_+_23145396 NM_001031710 NM_001172428 AK297421 AK056390	19550	+	TSC_hg19_v1_chr7_+_23145403 AK297595 AL136597 AK296219 AK297369 BC039585 BC009555 AF111113 AK290479 EF560731 EU831631 EU831716 EU831829	19702	+	NM_018846	20094	+	BC018710|FAM126A|84668|family with sequence similarity 126, member A##NM_032581|FAM126A|84668|family with sequence similarity 126, member A##AB030241|FAM126A|84668|family with sequence similarity 126, member A##AK056319|FAM126A|84668|family with sequence similarity 126, member A##AK297399|FAM126A|84668|family with sequence similarity 126, member A##AL833296|FAM126A|84668|family with sequence similarity 126, member A##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_001031710|KLHL7|55975|kelch-like 7 (Drosophila)##NM_001172428|KLHL7|55975|kelch-like 7 (Drosophila)##AK297421|KLHL7|55975|kelch-like 7 (Drosophila)##AK056390|KLHL7|55975|kelch-like 7 (Drosophila)##AK297595|KLHL7|55975|kelch-like 7 (Drosophila)##AL136597|KLHL7|55975|kelch-like 7 (Drosophila)##AK296219|KLHL7|55975|kelch-like 7 (Drosophila)##AK297369|KLHL7|55975|kelch-like 7 (Drosophila)##BC039585|KLHL7|55975|kelch-like 7 (Drosophila)##BC009555|KLHL7|55975|kelch-like 7 (Drosophila)##AF111113|KLHL7|55975|kelch-like 7 (Drosophila)##AK290479|KLHL7|55975|kelch-like 7 (Drosophila)##EF560731|KLHL7|55975|kelch-like 7 (Drosophila)##EU831631|KLHL7|55975|kelch-like 7 (Drosophila)##EU831716|KLHL7|55975|kelch-like 7 (Drosophila)##EU831829|KLHL7|55975|kelch-like 7 (Drosophila)##NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)	0.505257	CTCF.p2:7:0.505
chr7	86777710	86777817	reg1004763.p1	5.762	+	TSC_hg19_v1_chr7_-_86688965 NM_001142749	-88785	-	AK296250 NM_152748	-182517	-	X77748 TSC_hg19_v1_chr7_+_86274130 DQ315361 DQ315362 DQ315363	-503647	+	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	3950	+	NM_021145 TSC_hg19_v1_chr7_+_86781946 BC070064	4174	+	BT006973 TSC_hg19_v1_chr7_-_86849049 BC002837 NM_024315 AK313794	71178	-	NM_001142749|KIAA1324L|222223|KIAA1324-like##AK296250|KIAA1324L|222223|KIAA1324-like##NM_152748|KIAA1324L|222223|KIAA1324-like##X77748|GRM3|2913|glutamate receptor, metabotropic 3##DQ315361|GRM3|2913|glutamate receptor, metabotropic 3##DQ315362|GRM3|2913|glutamate receptor, metabotropic 3##DQ315363|GRM3|2913|glutamate receptor, metabotropic 3##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_021145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BC070064|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BT006973|C7orf23|79161|chromosome 7 open reading frame 23##BC002837|C7orf23|79161|chromosome 7 open reading frame 23##NM_024315|C7orf23|79161|chromosome 7 open reading frame 23##AK313794|C7orf23|79161|chromosome 7 open reading frame 23	0.405146	
chr10	104368309	104368476	reg1024356.p1	5.761	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	-104573	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	-104673	+	CU674342 AM393135 DQ892689 DQ895934 AB462953 BC026016 TSC_hg19_v1_chr10_-_104262470 BC000693 Z14978 X82206 AK302072 AK312506 AK297362 AK297620 NM_005736	-105935	-	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	35892	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	105705	-	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	105953	+	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2	0.365748	CTCF.p2:107:0.366
chr1	101300694	101300802	reg1024571.p1	5.761	+	NM_001078 NM_001199834 NM_080682 TSC_hg19_v1_chr1_+_101185297 AK223266 AK291732 AK296692 BC068490 M30257 BC017276 BC085003 M60335 AB590609 EU831989 EU832082 X53051 CU686647	-115442	+	AK225748 TSC_hg19_v1_chr1_+_101004594	-296220	+	AB042410 BC036775 NM_022049	-297039	+	TSC_hg19_v1_chr1_-_101360249 BC014910	59519	-	TSC_hg19_v1_chr1_-_101360368 AK312895 AB009284 AF000416 AK096914 BC036015 AK298124 BC001649 BC001835 BC008722	59622	-	TSC_hg19_v1_chr1_-_101360405 NM_001033025 NM_001439	59663	-	NM_001078|VCAM1|7412|vascular cell adhesion molecule 1##NM_001199834|VCAM1|7412|vascular cell adhesion molecule 1##NM_080682|VCAM1|7412|vascular cell adhesion molecule 1##AK223266|VCAM1|7412|vascular cell adhesion molecule 1##AK291732|VCAM1|7412|vascular cell adhesion molecule 1##AK296692|VCAM1|7412|vascular cell adhesion molecule 1##BC068490|VCAM1|7412|vascular cell adhesion molecule 1##M30257|VCAM1|7412|vascular cell adhesion molecule 1##BC017276|VCAM1|7412|vascular cell adhesion molecule 1##BC085003|VCAM1|7412|vascular cell adhesion molecule 1##M60335|VCAM1|7412|vascular cell adhesion molecule 1##EU831989|VCAM1|7412|vascular cell adhesion molecule 1##EU832082|VCAM1|7412|vascular cell adhesion molecule 1##X53051|VCAM1|7412|vascular cell adhesion molecule 1##AK225748|GPR88|54112|G protein-coupled receptor 88##AB042410|GPR88|54112|G protein-coupled receptor 88##BC036775|GPR88|54112|G protein-coupled receptor 88##NM_022049|GPR88|54112|G protein-coupled receptor 88##BC014910|EXTL2|2135|exostoses (multiple)-like 2##AK312895|EXTL2|2135|exostoses (multiple)-like 2##AB009284|EXTL2|2135|exostoses (multiple)-like 2##AF000416|EXTL2|2135|exostoses (multiple)-like 2##AK096914|EXTL2|2135|exostoses (multiple)-like 2##BC036015|EXTL2|2135|exostoses (multiple)-like 2##AK298124|EXTL2|2135|exostoses (multiple)-like 2##NM_001033025|EXTL2|2135|exostoses (multiple)-like 2##NM_001439|EXTL2|2135|exostoses (multiple)-like 2	0.855812	CTCF.p2:8:0.856
chr3	161226778	161226929	reg1023700.p1	5.761	+	NM_001080440	-12258	+	AF458592 BC037817 NM_001040100	-137045	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-287732	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	3569425	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	3687652	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	4328340	-	NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase	0.923801	CTCF.p2:-6:0.924
chr7	151727331	151727440	reg1025150.p1	5.761	+	TSC_hg19_v1_chr7_+_151722852 AK025287	-4533	+	TSC_hg19_v1_chr7_+_151722826 AK298911	-4553	+	TSC_hg19_v1_chr7_+_151722782 NM_022087	-4588	+	TSC_hg19_v1_chr7_-_152133040 AY024361	405607	-	TSC_hg19_v1_chr7_-_152133074 NM_170606	405696	-	TSC_hg19_v1_chr7_+_152161285 BC036622	433854	+	AK025287|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)##AK298911|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)##NM_022087|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)##AY024361|MLL3|58508|myeloid/lymphoid or mixed-lineage leukemia 3##NM_170606|MLL3|58508|myeloid/lymphoid or mixed-lineage leukemia 3##BC036622|LOC100128822|100128822|uncharacterized LOC100128822	0.830069	CTCF.p2:-3:0.830
chr10	53764228	53764324	reg1022944.p1	5.760	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-304929	-	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-929985	+	TSC_hg19_v1_chr10_+_52751129 D45864	-1013155	+	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	309839	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	767150	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2796722	-	AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##D45864|PRKG1|5592|protein kinase, cGMP-dependent, type I##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15	0.232047	CTCF.p2:2:0.232
chr10	92803137	92803265	reg1025545.p1	5.760	+	X83703 NM_014391	-122173	-	AB528537 DQ892852 DQ896099 AY903446 BC005191 AK290960 BC018667 TSC_hg19_v1_chr10_-_92680845	-122385	-	TSC_hg19_v1_chr10_+_92631730 NM_001104546 NM_006413 AL833628 AK296196 U77665 AK312900 AK225532 DQ893181 DQ896488	-171479	+	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	119561	+	TSC_hg19_v1_chr10_+_92980445 NM_032373	177207	+	TSC_hg19_v1_chr10_+_92980539 AL832496	177333	+	X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##NM_001104546|RPP30|10556|ribonuclease P/MRP 30kDa subunit##NM_006413|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AL833628|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK296196|RPP30|10556|ribonuclease P/MRP 30kDa subunit##U77665|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK312900|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK225532|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ893181|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ896488|RPP30|10556|ribonuclease P/MRP 30kDa subunit##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5##NM_032373|PCGF5|84333|polycomb group ring finger 5##AL832496|PCGF5|84333|polycomb group ring finger 5	0.666318	CTCF.p2:17:0.666
chr11	61213782	61213885	reg1020884.p1	5.760	+	TSC_hg19_v1_chr11_+_61197595 BX648946 AK000494 NM_017841 BC002331	-16239	+	TSC_hg19_v1_chr11_-_61197468 NM_001136040 NM_001142565	-16368	-	BC018135 TSC_hg19_v1_chr11_-_61197448 NM_024811 AK096343 AK294578 AL833332 BX537888 AL832667	-16470	-	NM_001170753 NM_145017 TSC_hg19_v1_chr11_+_61248591 AK057333 BC043246 JF442033	34785	+	NM_001145077	62438	+	TSC_hg19_v1_chr11_-_61348549 BC125170 BC125171 NM_001252065 NM_004200	134694	-	AK000494|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##NM_017841|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##BC002331|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##NM_001136040|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##NM_001142565|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##BC018135|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##NM_024811|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK096343|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK294578|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AL833332|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##BX537888|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AL832667|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##NM_001170753|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##NM_145017|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##AK057333|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##BC043246|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##JF442033|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B##BC125170|SYT7|9066|synaptotagmin VII##BC125171|SYT7|9066|synaptotagmin VII##NM_001252065|SYT7|9066|synaptotagmin VII##NM_004200|SYT7|9066|synaptotagmin VII	0.996522	CTCF.p2:-3:0.997
chr20	57582918	57583084	reg1023125.p1	5.760	+	TSC_hg19_v1_chr20_-_57582305 AK314931 NM_001336	-696	-	AF009923 BT019915 CU692072 AM392668 AB528116 AF073890 AF136273 BC025419 BC042168 TSC_hg19_v1_chr20_-_57582302	-774	-	TSC_hg19_v1_chr20_+_57556329 BC014952 BX647417 AJ238379 AF161479 AB528731 AK023927 AK023310 AK001316	-26652	+	AJ292757 NM_030773	11307	+	BT007293 TSC_hg19_v1_chr20_-_57607361 BC003671 BC001690 AK315493 AK026556 AF077045 AF052955 BC105811 NM_006886	24362	-	TSC_hg19_v1_chr20_-_57617873 AK314449 AK002157 BC010649 BC013969 AF151865 AK298135 NM_016045	34867	-	AK314931|CTSZ|1522|cathepsin Z##NM_001336|CTSZ|1522|cathepsin Z##AF009923|CTSZ|1522|cathepsin Z##BT019915|CTSZ|1522|cathepsin Z##AM392668|CTSZ|1522|cathepsin Z##AF073890|CTSZ|1522|cathepsin Z##AF136273|CTSZ|1522|cathepsin Z##BC025419|CTSZ|1522|cathepsin Z##BC042168|CTSZ|1522|cathepsin Z##BC014952|TH1L|51497|TH1-like (Drosophila)##BX647417|TH1L|51497|TH1-like (Drosophila)##AJ238379|TH1L|51497|TH1-like (Drosophila)##AF161479|TH1L|51497|TH1-like (Drosophila)##AK023927|TH1L|51497|TH1-like (Drosophila)##AK023310|TH1L|51497|TH1-like (Drosophila)##AK001316|TH1L|51497|TH1-like (Drosophila)##AJ292757|TUBB1|81027|tubulin, beta 1 class VI##NM_030773|TUBB1|81027|tubulin, beta 1 class VI##BT007293|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC003671|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC001690|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK315493|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK026556|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF077045|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF052955|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC105811|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##NM_006886|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK314449|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK002157|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC010649|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC013969|SLMO2|51012|slowmo homolog 2 (Drosophila)##AF151865|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK298135|SLMO2|51012|slowmo homolog 2 (Drosophila)##NM_016045|SLMO2|51012|slowmo homolog 2 (Drosophila)	0.029269	
chr12	67419430	67419561	reg1026181.p1	5.759	+	TSC_hg19_v1_chr12_-_67072881 AK095519 NM_001178074 NM_021150	-346593	-	BC115393 BC115394 TSC_hg19_v1_chr12_-_67072757 AK307576	-346739	-	TSC_hg19_v1_chr12_+_66696305 NM_033647 BC143409 BC143411 AK290894 AK024464 AB527324 AF319995	-723166	+	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	243607	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	243677	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	243935	+	AK095519|GRIP1|23426|glutamate receptor interacting protein 1##NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1##NM_021150|GRIP1|23426|glutamate receptor interacting protein 1##BC115393|GRIP1|23426|glutamate receptor interacting protein 1##BC115394|GRIP1|23426|glutamate receptor interacting protein 1##AK307576|GRIP1|23426|glutamate receptor interacting protein 1##NM_033647|HELB|92797|helicase (DNA) B##BC143409|HELB|92797|helicase (DNA) B##BC143411|HELB|92797|helicase (DNA) B##AK290894|HELB|92797|helicase (DNA) B##AF319995|HELB|92797|helicase (DNA) B##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1	0.538018	CTCF.p2:-15:0.538
chr14	45671217	45671327	reg1023665.p1	5.759	+	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-66083	+	AK093422 AX748116 TSC_hg19_v1_chr14_+_45605142	-66130	+	TSC_hg19_v1_chr14_+_45605134 NM_020937 BC036056	-66147	+	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	51095	-	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	51374	-	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	1449711	-	DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AK093422|FANCM|57697|Fanconi anemia, complementation group M##NM_020937|FANCM|57697|Fanconi anemia, complementation group M##BC036056|FANCM|57697|Fanconi anemia, complementation group M##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like	0.109109	
chr15	75940226	75940406	reg1024047.p2	5.759	+	AB463774 AM393583 CU675427 CU680036 TSC_hg19_v1_chr15_-_75932566 BC020557 BC011745 AY050497 AL136913 BC006487 AK001830 AK223121 NM_018285	-7730	-	NM_001042588	-21598	-	NM_001042581 NM_005701	-21871	-	BC018775 NM_153271 AL833039 EF219141 DQ891695 DQ895211 EU831407 EU831499	1078	+	AB462981 AY359468 X96753 TSC_hg19_v1_chr15_-_76005157	64812	-	TSC_hg19_v1_chr15_-_76005190 NM_001897	64879	-	AM393583|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC020557|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC011745|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AY050497|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AL136913|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC006487|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK001830|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK223121|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_018285|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_001042588|SNUPN|10073|snurportin 1##NM_001042581|SNUPN|10073|snurportin 1##NM_005701|SNUPN|10073|snurportin 1##BC018775|SNX33|257364|sorting nexin 33##NM_153271|SNX33|257364|sorting nexin 33##AL833039|SNX33|257364|sorting nexin 33##EF219141|SNX33|257364|sorting nexin 33##DQ891695|SNX33|257364|sorting nexin 33##DQ895211|SNX33|257364|sorting nexin 33##EU831407|SNX33|257364|sorting nexin 33##EU831499|SNX33|257364|sorting nexin 33##AY359468|CSPG4|1464|chondroitin sulfate proteoglycan 4##X96753|CSPG4|1464|chondroitin sulfate proteoglycan 4##NM_001897|CSPG4|1464|chondroitin sulfate proteoglycan 4	1.185191	CTCF.p2:26:0.828	CTCF.p2:88:0.331
chr19	48202712	48202857	reg1023835.p1	5.759	+	TSC_hg19_v1_chr19_+_48111441 BC032065 NM_015711	-91340	+	NM_001101419	-143672	-	TSC_hg19_v1_chr19_-_48018321 BC028234 AK098401 NM_003827	-184369	-	NM_014601 TSC_hg19_v1_chr19_+_48216678 AK315548 AK074701 AK097126 AK097228 AK296907 AK298067 BC014445	13866	+	NM_015710 TSC_hg19_v1_chr19_+_48248797	46010	+	TSC_hg19_v1_chr19_+_48248802 AK303180 AK297877 AK303918 AK309788 AK301117 AF182076 BC006311 BC013203 AY535000 CU679611 DQ892724 DQ895973 AK024486 BC013235 BC013307 BC014009 BC039869 BC007248 BC004229 AF296124 AL359336 AL359335	46051	+	BC032065|GLTSCR1|29998|glioma tumor suppressor candidate region gene 1##NM_015711|GLTSCR1|29998|glioma tumor suppressor candidate region gene 1##NM_001101419|ZNF541|84215|zinc finger protein 541##BC028234|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##AK098401|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##NM_003827|NAPA|8775|N-ethylmaleimide-sensitive factor attachment protein, alpha##NM_014601|EHD2|30846|EH-domain containing 2##AK315548|EHD2|30846|EH-domain containing 2##AK074701|EHD2|30846|EH-domain containing 2##AK097126|EHD2|30846|EH-domain containing 2##AK097228|EHD2|30846|EH-domain containing 2##AK296907|EHD2|30846|EH-domain containing 2##AK298067|EHD2|30846|EH-domain containing 2##BC014445|EHD2|30846|EH-domain containing 2##NM_015710|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK297877|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK303918|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK309788|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK301117|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF182076|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC006311|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013203|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AY535000|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ892724|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ895973|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK024486|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013235|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013307|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC014009|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC039869|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC007248|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC004229|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF296124|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359336|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359335|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2	0.201124	CTCF.p2:-6:0.201
chr2	237218322	237218427	reg1019119.p1	5.758	+	NM_212556 BX647589	-45380	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-141742	-	AK311262 TSC_hg19_v1_chr2_-_237076045	-142360	-	BC043504 NM_024726 AK294105 BC028699	197758	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	260054	+	BC036499 NM_006710 NM_198189	775644	+	NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	0.953855	CTCF.p2:9:0.954
chr8	57883501	57883640	reg1025585.p1	5.758	+	BC107706 TSC_hg19_v1_chr8_-_57359201 AK309758 AK314908 NM_001135690	-524341	-	CR541808 CR541828 DQ890865 DQ890871 DQ894027 BC032505 NM_006211	-525019	-	TSC_hg19_v1_chr8_+_57358383 AK091563 AX747062	-525198	+	AY032885 TSC_hg19_v1_chr8_-_57906227	22686	-	TSC_hg19_v1_chr8_-_57906381 BC017797	22808	-	BC067814 TSC_hg19_v1_chr8_-_57906402	22832	-	BC107706|PENK|5179|proenkephalin##AK314908|PENK|5179|proenkephalin##NM_001135690|PENK|5179|proenkephalin##CR541808|PENK|5179|proenkephalin##CR541828|PENK|5179|proenkephalin##DQ890865|PENK|5179|proenkephalin##DQ890871|PENK|5179|proenkephalin##DQ894027|PENK|5179|proenkephalin##BC032505|PENK|5179|proenkephalin##NM_006211|PENK|5179|proenkephalin##AY032885|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1	0.267375	CTCF.p2:-18:0.267
chr10	129705216	129705311	reg1024099.p2	5.757	+	TSC_hg19_v1_chr10_-_129691206 BC029478 NM_152311	-14056	-	CU688662 TSC_hg19_v1_chr10_-_129691142	-14169	-	NM_207426	-169726	+	TSC_hg19_v1_chr10_+_129705334 BC031078 NM_006504	59	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	192	+	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	140591	+	BC029478|CLRN3|119467|clarin 3##NM_152311|CLRN3|119467|clarin 3##NM_207426|FOXI2|399823|forkhead box I2##BC031078|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_006504|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E	0.0	
chr16	27386359	27386484	reg1025724.p2	5.757	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-45077	+	TSC_hg19_v1_chr16_+_27325301 BC110343 AK223591 X52425	-61103	+	TSC_hg19_v1_chr16_+_27325254 AK314863 NM_000418 NM_001008699 AK303255	-61167	+	AK292663 NM_181078 NM_181079 AK312825	27066	+	NM_021798 AY358826 AF254067	52183	+	TSC_hg19_v1_chr16_-_27561218 BX648143	174797	-	BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BC110343|IL4R|3566|interleukin 4 receptor##AK223591|IL4R|3566|interleukin 4 receptor##X52425|IL4R|3566|interleukin 4 receptor##AK314863|IL4R|3566|interleukin 4 receptor##NM_000418|IL4R|3566|interleukin 4 receptor##NM_001008699|IL4R|3566|interleukin 4 receptor##AK303255|IL4R|3566|interleukin 4 receptor##AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.940178	CTCF.p2:30:0.940
chr1	937332	937464	reg1021691.p1	5.757	+	BC012351 TSC_hg19_v1_chr1_-_935476 NM_001142467 NM_021170	-1888	-	AB048791 DQ895490 TSC_hg19_v1_chr1_-_935444	-2000	-	AL136730 NM_001160184 NM_032129 BC101386 BC101387 AB463180 AM393848 BC141658	-35506	+	NM_005101 TSC_hg19_v1_chr1_+_948876 M13755 BC009507	11481	+	TSC_hg19_v1_chr1_+_955499 AB191264 NM_198576	18098	+	TSC_hg19_v1_chr1_+_955536 AB385240	18145	+	BC012351|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_001142467|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_021170|HES4|57801|hairy and enhancer of split 4 (Drosophila)##AB048791|HES4|57801|hairy and enhancer of split 4 (Drosophila)##DQ895490|HES4|57801|hairy and enhancer of split 4 (Drosophila)##AL136730|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##NM_001160184|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##NM_032129|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC101386|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC101387|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##AM393848|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC141658|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##NM_005101|ISG15|9636|ISG15 ubiquitin-like modifier##M13755|ISG15|9636|ISG15 ubiquitin-like modifier##BC009507|ISG15|9636|ISG15 ubiquitin-like modifier##AB191264|AGRN|375790|agrin##NM_198576|AGRN|375790|agrin	0.775467	CTCF.p2:18:0.775
chr22	18640064	18640177	reg1021982.p1	5.757	+	TSC_hg19_v1_chr22_+_18632936 AK313385 AL136690 BC014896	-7218	+	TSC_hg19_v1_chr22_+_18632731 NM_017414	-7386	+	TSC_hg19_v1_chr22_+_18593574 AJ245922 CR456600 BC104845 BC074827 AK315316	-46537	+	NM_005675 AF228707 TSC_hg19_v1_chr22_+_18893832 AK315115 BC047039 CR456434 AK098780 AB528122 CU012994 CU013282	253690	+	AB209472 TSC_hg19_v1_chr22_-_18923807 BC068260 BC094736 BC036534	283611	-	BC118597 BC121809 NM_001195226 NM_016335 U79754	283894	-	AK313385|USP18|11274|ubiquitin specific peptidase 18##AL136690|USP18|11274|ubiquitin specific peptidase 18##BC014896|USP18|11274|ubiquitin specific peptidase 18##NM_017414|USP18|11274|ubiquitin specific peptidase 18##AJ245922|TUBA8|51807|tubulin, alpha 8##CR456600|TUBA8|51807|tubulin, alpha 8##BC104845|TUBA8|51807|tubulin, alpha 8##BC074827|TUBA8|51807|tubulin, alpha 8##AK315316|TUBA8|51807|tubulin, alpha 8##NM_005675|DGCR6|8214|DiGeorge syndrome critical region gene 6##AF228707|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK315115|DGCR6|8214|DiGeorge syndrome critical region gene 6##BC047039|DGCR6|8214|DiGeorge syndrome critical region gene 6##CR456434|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK098780|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU012994|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU013282|DGCR6|8214|DiGeorge syndrome critical region gene 6##AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1##BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1##BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1##BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1##BC118597|PRODH|5625|proline dehydrogenase (oxidase) 1##BC121809|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_001195226|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_016335|PRODH|5625|proline dehydrogenase (oxidase) 1##U79754|PRODH|5625|proline dehydrogenase (oxidase) 1	0.025216	
chrY	27502946	27503031	reg1024668.p1	5.757	+	AF000980 NM_001002760 NM_001002761 NM_004678	-304738	-	NM_001005375 NM_020364 NM_020420 NM_001005785 NM_001005786 AF414184 BC047480 BC036648 BC047617 U21663 AF248480 AF248482 AF248481 BC113005 BC113006	-522915	+	BC113005 BC047617 BC047480 NM_020364 NM_020420	-543458	-	AK292375 BC033041 NM_001003894 NM_001003895 NM_004680 NM_170723 AK292318 AF000981 AF080597	265286	+	AK289543 AK311508 NM_005840 AK125483	31597452	+	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	31711009	+	AF000980|BPY2|9083|basic charge, Y-linked, 2##NM_001002760|BPY2B|442867|basic charge, Y-linked, 2B##NM_001002761|BPY2C|442868|basic charge, Y-linked, 2C##NM_004678|BPY2|9083|basic charge, Y-linked, 2##NM_001005375|DAZ4|57135|deleted in azoospermia 4##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##NM_001005785|DAZ2|57055|deleted in azoospermia 2##NM_001005786|DAZ2|57055|deleted in azoospermia 2##AF414184|DAZ2|57055|deleted in azoospermia 2##BC047480|DAZ4|57135|deleted in azoospermia 4##BC036648|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##U21663|DAZ2|57055|deleted in azoospermia 2##AF248480|DAZ2|57055|deleted in azoospermia 2##AF248482|DAZ4|57135|deleted in azoospermia 4##AF248481|DAZ3|57054|deleted in azoospermia 3##BC113005|DAZ3|57054|deleted in azoospermia 3##BC113006|DAZ2|57055|deleted in azoospermia 2##BC113005|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##BC047480|DAZ4|57135|deleted in azoospermia 4##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##AK292375|CDY1|9085|chromodomain protein, Y-linked, 1##BC033041|CDY1|9085|chromodomain protein, Y-linked, 1##NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1##NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1##AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B##AF000981|CDY1|9085|chromodomain protein, Y-linked, 1##AF080597|CDY1|9085|chromodomain protein, Y-linked, 1##AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7	0.973166	CTCF.p2:0:0.973
chr16	30662683	30662821	reg1023383.p1	5.756	+	TSC_hg19_v1_chr16_+_30662286 BC010232 BC050677 NM_024031 BC011573 BC000119 AK074783	-487	+	TSC_hg19_v1_chr16_+_30662098 CR936781 AK125716	-652	+	AK310459 AB065282 BC014000 NM_138447 TSC_hg19_v1_chr16_-_30621684	-41096	-	NM_001105079	13025	+	TSC_hg19_v1_chr16_+_30676113 AK298229	13364	+	AB621816 TSC_hg19_v1_chr16_+_30709918	47184	+	BC010232|PRR14|78994|proline rich 14##BC050677|PRR14|78994|proline rich 14##NM_024031|PRR14|78994|proline rich 14##BC011573|PRR14|78994|proline rich 14##BC000119|PRR14|78994|proline rich 14##AK074783|PRR14|78994|proline rich 14##CR936781|PRR14|78994|proline rich 14##AK125716|PRR14|78994|proline rich 14##AK310459|ZNF689|115509|zinc finger protein 689##AB065282|ZNF689|115509|zinc finger protein 689##BC014000|ZNF689|115509|zinc finger protein 689##NM_138447|ZNF689|115509|zinc finger protein 689##NM_001105079|FBRS|64319|fibrosin##AK298229|FBRS|64319|fibrosin	0.166074	
chr2	46593572	46593682	reg1024843.p2	5.756	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	-68652	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	-69036	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-714553	+	NM_001145051	113076	+	BC034808 NM_080653	153468	-	TSC_hg19_v1_chr2_+_46769874 NM_012249 AK095329	176222	+	U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375##BC034808|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_080653|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_012249|RHOQ|23433|ras homolog gene family, member Q##AK095329|RHOQ|23433|ras homolog gene family, member Q	0.738927	CTCF.p2:-2:0.739
chr1	27959491	27959672	reg1024990.p2	5.755	+	M27454 AK301078 BC002836 AK304846 NM_001042729	-6506	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	-6911	-	BC064935 TSC_hg19_v1_chr1_-_27930394	-29204	-	TSC_hg19_v1_chr1_-_27961656 BC064382 AK130188 NM_005248	2105	-	TSC_hg19_v1_chr1_-_27998690 X02492 BC011601 BC015603	39096	-	TSC_hg19_v1_chr1_-_27998704 AK024814 AK314488	39128	-	M27454|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK301078|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042729|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##BC064935|AHDC1|27245|AT hook, DNA binding motif, containing 1##BC064382|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK130188|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_005248|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##X02492|IFI6|2537|interferon, alpha-inducible protein 6##BC011601|IFI6|2537|interferon, alpha-inducible protein 6##BC015603|IFI6|2537|interferon, alpha-inducible protein 6##AK024814|IFI6|2537|interferon, alpha-inducible protein 6##AK314488|IFI6|2537|interferon, alpha-inducible protein 6	0.0	
chr17	26132922	26133102	reg1002943.p2	5.755	+	BC130283 BC144126 U05810 L09210 X73029 AF068236 AK304252 NM_000625 TSC_hg19_v1_chr17_-_26127556	-5497	-	U31511 TSC_hg19_v1_chr17_-_26127402	-5614	-	TSC_hg19_v1_chr17_+_25958264 AB003517 AB008492	-174740	+	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	87379	-	TSC_hg19_v1_chr17_+_26369661 AK315315 AF197898 NM_016231 AF180819	236641	+	AB384832 AK024686 TSC_hg19_v1_chr17_+_26370066	236989	+	BC130283|NOS2|4843|nitric oxide synthase 2, inducible##BC144126|NOS2|4843|nitric oxide synthase 2, inducible##U05810|NOS2|4843|nitric oxide synthase 2, inducible##L09210|NOS2|4843|nitric oxide synthase 2, inducible##X73029|NOS2|4843|nitric oxide synthase 2, inducible##AF068236|NOS2|4843|nitric oxide synthase 2, inducible##AK304252|NOS2|4843|nitric oxide synthase 2, inducible##NM_000625|NOS2|4843|nitric oxide synthase 2, inducible##U31511|NOS2|4843|nitric oxide synthase 2, inducible##AB003517|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB008492|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108##AK315315|NLK|51701|nemo-like kinase##AF197898|NLK|51701|nemo-like kinase##NM_016231|NLK|51701|nemo-like kinase##AF180819|NLK|51701|nemo-like kinase##AK024686|NLK|51701|nemo-like kinase	0.0	
chr2	59503326	59503429	reg1024228.p2	5.755	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-1034895	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-1229389	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-1229623	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	1277145	-	AF080216 TSC_hg19_v1_chr2_-_60780784	1277401	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	1480107	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.572457	CTCF.p2:-15:0.572
chr3	28517823	28517946	reg1022566.p2	5.755	+	NM_001040432	-85898	+	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	-127323	-	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	-127502	-	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	805080	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	2130138	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	2130519	+	NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2##NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	0.915257	CTCF.p2:-2:0.915
chr6	16317006	16317108	reg1025237.p1	5.755	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-78206	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-173747	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-187620	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	444640	-	NM_001190766	785431	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	964797	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.799524	CTCF.p2:14:0.800
chr7	34127857	34128005	reg1025872.p2	5.755	+	AK289963 NM_133468 AK096150 BC060868	-182789	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-958850	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-978954	-	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	569988	+	DQ287932 NM_015283	949721	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	1097861	-	AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)	0.997387	CTCF.p2:-9:0.997
chr16	56075804	56075910	reg1022445.p1	5.754	+	AK294334 NM_001190158	-85915	-	AY907669 BC069548 BC069501 BC117126 BC143692 AK056109 NM_001143685 NM_145024	-166613	-	BC110338 TSC_hg19_v1_chr16_-_55867027 AB119996 AB119995 BC012418 AK290623 AK292209 NM_001025194 NM_001025195 NM_001266	-208812	-	NM_020988 NM_138736 TSC_hg19_v1_chr16_+_56225253	149394	+	AK056008 TSC_hg19_v1_chr16_+_56225314	149453	+	AF124145 TSC_hg19_v1_chr16_-_56459357	383472	-	AK294334|CES5A|221223|carboxylesterase 5A##NM_001190158|CES5A|221223|carboxylesterase 5A##AY907669|CES5A|221223|carboxylesterase 5A##BC069548|CES5A|221223|carboxylesterase 5A##BC069501|CES5A|221223|carboxylesterase 5A##BC117126|CES5A|221223|carboxylesterase 5A##BC143692|CES5A|221223|carboxylesterase 5A##AK056109|CES5A|221223|carboxylesterase 5A##NM_001143685|CES5A|221223|carboxylesterase 5A##NM_145024|CES5A|221223|carboxylesterase 5A##BC110338|CES1|1066|carboxylesterase 1##AB119996|CES1|1066|carboxylesterase 1##AB119995|CES1|1066|carboxylesterase 1##BC012418|CES1|1066|carboxylesterase 1##AK290623|CES1|1066|carboxylesterase 1##AK292209|CES1|1066|carboxylesterase 1##NM_001025194|CES1|1066|carboxylesterase 1##NM_001025195|CES1|1066|carboxylesterase 1##NM_001266|CES1|1066|carboxylesterase 1##NM_020988|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_138736|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##AK056008|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##AF124145|AMFR|267|autocrine motility factor receptor	0.960022	CTCF.p2:6:0.960
chr17	33390728	33390862	reg1019373.p2	5.754	+	TSC_hg19_v1_chr17_-_33390690 CR933651 NM_001017368	-78	-	TSC_hg19_v1_chr17_+_33307530 NM_002311 NM_013975 BC068005 AK300363 AK308407 U40671 X84740 BC009026	-83207	+	TSC_hg19_v1_chr17_+_33288558 AK315671 NM_052857 AK055707 AB590460 BC002913 BC011584 DQ892326 DQ895528	-102206	+	TSC_hg19_v1_chr17_-_33416298 AK093112 AX747930 BC028424	25516	-	AB464124 DQ892318 DQ895520 BC002723 AB013341 AB016223 AB016224 AB016225 Y15572 AF034956 BC014422 TSC_hg19_v1_chr17_-_33446836 AK296241 BX647297 AK301249	55950	-	TSC_hg19_v1_chr17_-_33446880 NM_001142571 NM_002878 NM_133629	56080	-	CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1##NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1##NM_002311|LIG3|3980|ligase III, DNA, ATP-dependent##NM_013975|LIG3|3980|ligase III, DNA, ATP-dependent##BC068005|LIG3|3980|ligase III, DNA, ATP-dependent##AK300363|LIG3|3980|ligase III, DNA, ATP-dependent##AK308407|LIG3|3980|ligase III, DNA, ATP-dependent##U40671|LIG3|3980|ligase III, DNA, ATP-dependent##X84740|LIG3|3980|ligase III, DNA, ATP-dependent##BC009026|LIG3|3980|ligase III, DNA, ATP-dependent##AK315671|ZNF830|91603|zinc finger protein 830##NM_052857|ZNF830|91603|zinc finger protein 830##AK055707|ZNF830|91603|zinc finger protein 830##BC002913|ZNF830|91603|zinc finger protein 830##BC011584|ZNF830|91603|zinc finger protein 830##DQ892326|ZNF830|91603|zinc finger protein 830##DQ895528|ZNF830|91603|zinc finger protein 830##AK093112|RFFL|117584|ring finger and FYVE-like domain containing 1##BC028424|RFFL|117584|ring finger and FYVE-like domain containing 1##DQ892318|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##DQ895520|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC002723|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB013341|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016223|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016224|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016225|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##Y15572|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AF034956|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC014422|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK296241|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BX647297|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK301249|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_001142571|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_002878|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##NM_133629|RAD51D|5892|RAD51 homolog D (S. cerevisiae)	0.0	
chr19	39260474	39260611	reg1021877.p1	5.754	+	AK127398 NM_144691	-25429	-	TSC_hg19_v1_chr19_-_39227632 AK125713	-32920	-	AK023756 TSC_hg19_v1_chr19_+_39155341	-105267	+	U06643 BC061588 BC073743 L07769 NM_002307	3608	-	L07769 NM_001042507 BC061588 BC073743 U06643	19309	+	AK296194 BT007032 CR536544 AF014838 U82953 BC034750 BC003661 BC005146 TSC_hg19_v1_chr19_-_39303586 AB006781 AK290269 AK296604	43011	-	AK127398|CAPN12|147968|calpain 12##NM_144691|CAPN12|147968|calpain 12##AK125713|CAPN12|147968|calpain 12##U06643|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC061588|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC073743|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##L07769|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##NM_002307|LGALS7|3963|lectin, galactoside-binding, soluble, 7##L07769|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##NM_001042507|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC061588|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC073743|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##U06643|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##AK296194|LGALS4|3960|lectin, galactoside-binding, soluble, 4##BT007032|LGALS4|3960|lectin, galactoside-binding, soluble, 4##CR536544|LGALS4|3960|lectin, galactoside-binding, soluble, 4##AF014838|LGALS4|3960|lectin, galactoside-binding, soluble, 4##U82953|LGALS4|3960|lectin, galactoside-binding, soluble, 4##BC034750|LGALS4|3960|lectin, galactoside-binding, soluble, 4##BC003661|LGALS4|3960|lectin, galactoside-binding, soluble, 4##BC005146|LGALS4|3960|lectin, galactoside-binding, soluble, 4##AB006781|LGALS4|3960|lectin, galactoside-binding, soluble, 4##AK290269|LGALS4|3960|lectin, galactoside-binding, soluble, 4##AK296604|LGALS4|3960|lectin, galactoside-binding, soluble, 4	0.065564	
chr19	7451219	7451311	reg1022450.p1	5.754	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	-157305	-	TSC_hg19_v1_chr19_-_7099547 AK127494	-351714	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-381550	+	TSC_hg19_v1_chr19_+_7460030 NM_015318	8742	+	TSC_hg19_v1_chr19_+_7460061 AB011093	8812	+	AK127045 NM_001130955	53308	+	BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.61306	CTCF.p2:18:0.551
chr4	172706685	172706800	reg1023905.p1	5.754	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-1695328	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-1695544	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-1759237	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	27902	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	1383210	+	BC043556 TSC_hg19_v1_chr4_-_174090314	1383568	-	BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.0	
chr8	7448372	7448490	reg1024098.p2	5.754	+	NM_001136572	-8257	-	NM_001136572	-31198	-	DQ119826 NM_001037668 NM_001040705 BC137510 BC137513 AF540979 AY122467	-95014	+	NM_001164452 NM_001164456	124533	+	NM_001164449 NM_001164451	132181	+	NM_001164450	147477	+	NM_001136572|FAM90A7|441317|family with sequence similarity 90, member A7##NM_001136572|FAM90A7|441317|family with sequence similarity 90, member A7##DQ119826|DEFB107A|245910|defensin, beta 107A##NM_001037668|DEFB107A|245910|defensin, beta 107A##NM_001040705|DEFB107B|503614|defensin, beta 107B##BC137510|DEFB107A|245910|defensin, beta 107A##BC137513|DEFB107A|245910|defensin, beta 107A##AF540979|DEFB107A|245910|defensin, beta 107A##AY122467|DEFB107A|245910|defensin, beta 107A##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164449|FAM90A19|728753|family with sequence similarity 90, member A19##NM_001164451|FAM90A18|441326|family with sequence similarity 90, member A18##NM_001164450|FAM90A8|441324|family with sequence similarity 90, member A8	1.711518	CTCF.p2:21:0.971	CTCF.p2:-81:0.740
chr11	47572823	47572946	reg1028988.p1	5.753	+	AB210019 NM_001172639	-27345	-	BC031079 NM_198700	-56812	-	AK304430 AJ007988 DQ893717 AF248648 NM_001025596 NM_001172640 AF267533 AF267534	-62337	-	TSC_hg19_v1_chr11_-_47574683 BC036782 U63289	1759	-	TSC_hg19_v1_chr11_-_47574804 NM_006560	1901	-	AK127967 BC073798 NM_001143984 NM_175732	14050	+	AB210019|CELF1|10658|CUGBP, Elav-like family member 1##NM_001172639|CELF1|10658|CUGBP, Elav-like family member 1##BC031079|CELF1|10658|CUGBP, Elav-like family member 1##NM_198700|CELF1|10658|CUGBP, Elav-like family member 1##AK304430|CELF1|10658|CUGBP, Elav-like family member 1##AJ007988|CELF1|10658|CUGBP, Elav-like family member 1##DQ893717|CELF1|10658|CUGBP, Elav-like family member 1##AF248648|CELF1|10658|CUGBP, Elav-like family member 1##NM_001025596|CELF1|10658|CUGBP, Elav-like family member 1##NM_001172640|CELF1|10658|CUGBP, Elav-like family member 1##AF267533|CELF1|10658|CUGBP, Elav-like family member 1##AF267534|CELF1|10658|CUGBP, Elav-like family member 1##BC036782|CELF1|10658|CUGBP, Elav-like family member 1##U63289|CELF1|10658|CUGBP, Elav-like family member 1##NM_006560|CELF1|10658|CUGBP, Elav-like family member 1##BC073798|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##NM_001143984|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##NM_175732|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1	0.0	
chr1	148760845	148760980	reg1024782.p2	5.753	+	NM_001102663 AK290302 AY894562 AY894566	-21411	+	NM_001144032	-116902	+	NM_001102663 AK290302 AY894566	-183496	+	NM_001164261 NM_001164262	45102	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	638284	-	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	792111	+	NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001144032|PPIAL4E|730262|peptidylprolyl isomerase A (cyclophilin A)-like 4E##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G	0.02351	
chr1	25935179	25935356	reg1024460.p2	5.753	+	TSC_hg19_v1_chr1_+_25870146 BC029770 AL117654 AB528624	-65103	+	TSC_hg19_v1_chr1_+_25870097 AK091219 NM_015627	-65176	+	TSC_hg19_v1_chr1_+_25757387 AK311472 NM_018202 AY845015 BC007687 AK001609 AY845035 AY845036 BC032427 BC020801	-177782	+	AF261655 NM_020379	8691	+	AB209275 TSC_hg19_v1_chr1_+_25944698	9388	+	TSC_hg19_v1_chr1_+_26126678 AJ306399 NM_020451 NM_206926	191401	+	BC029770|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AL117654|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AK091219|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##NM_015627|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AK311472|TMEM57|55219|transmembrane protein 57##NM_018202|TMEM57|55219|transmembrane protein 57##AY845015|TMEM57|55219|transmembrane protein 57##BC007687|TMEM57|55219|transmembrane protein 57##AK001609|TMEM57|55219|transmembrane protein 57##AY845035|TMEM57|55219|transmembrane protein 57##AY845036|TMEM57|55219|transmembrane protein 57##BC032427|TMEM57|55219|transmembrane protein 57##BC020801|TMEM57|55219|transmembrane protein 57##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AB209275|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AJ306399|SEPN1|57190|selenoprotein N, 1##NM_020451|SEPN1|57190|selenoprotein N, 1##NM_206926|SEPN1|57190|selenoprotein N, 1	0.983744	CTCF.p2:3:0.984
chr2	223183913	223184033	reg1025792.p2	5.753	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	-20448	-	AK057009 NM_153038 BC109388	-21061	+	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	-24953	-	TSC_hg19_v1_chr2_+_223289261 AK314322	105267	+	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	105334	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	336821	-	EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK314322|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit	0.310304	CTCF.p2:0:0.310
chr6_dbb_hap3	288421	288549	reg1025986.p2	5.753	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999391	CTCF.p2:1:0.999
chr10	71559982	71560093	reg1024823.p1	5.752	+	NM_145306 BC013587	-170030	+	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	-226937	-	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	-348704	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	1620	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	1652	+	TSC_hg19_v1_chr10_+_71562275 M59217	2254	+	NM_145306|C10orf35|219738|chromosome 10 open reading frame 35##BC013587|C10orf35|219738|chromosome 10 open reading frame 35##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##M59217|COL13A1|1305|collagen, type XIII, alpha 1	0.80221	CTCF.p2:16:0.802
chr12	72332641	72332785	reg1025043.p2	5.752	+	AY098914 NM_173353 BC114442 BC114499 AK094614	-23	+	NM_001146213 NM_001146214 NM_022771 TSC_hg19_v1_chr12_+_72233538 AK022147 AK297626 AK307922 BC028352 AK225747 AL833639 AK225221 AK292306 AB449901	-99178	+	AB385582 AM393692 TSC_hg19_v1_chr12_+_72148987	-183765	+	TSC_hg19_v1_chr12_-_72666143 BC093901 BC093903	333465	-	AK095156 TSC_hg19_v1_chr12_-_72666355	333630	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	333791	+	AY098914|TPH2|121278|tryptophan hydroxylase 2##NM_173353|TPH2|121278|tryptophan hydroxylase 2##BC114442|TPH2|121278|tryptophan hydroxylase 2##BC114499|TPH2|121278|tryptophan hydroxylase 2##AK094614|TPH2|121278|tryptophan hydroxylase 2##NM_001146213|TBC1D15|64786|TBC1 domain family, member 15##NM_001146214|TBC1D15|64786|TBC1 domain family, member 15##NM_022771|TBC1D15|64786|TBC1 domain family, member 15##AK022147|TBC1D15|64786|TBC1 domain family, member 15##AK297626|TBC1D15|64786|TBC1 domain family, member 15##AK307922|TBC1D15|64786|TBC1 domain family, member 15##BC028352|TBC1D15|64786|TBC1 domain family, member 15##AK225747|TBC1D15|64786|TBC1 domain family, member 15##AL833639|TBC1D15|64786|TBC1 domain family, member 15##AK225221|TBC1D15|64786|TBC1 domain family, member 15##AK292306|TBC1D15|64786|TBC1 domain family, member 15##AB449901|TBC1D15|64786|TBC1 domain family, member 15##AM393692|RAB21|23011|RAB21, member RAS oncogene family##BC093901|LOC283392|283392|uncharacterized LOC283392##BC093903|LOC283392|283392|uncharacterized LOC283392##AK095156|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme	0.425041	CTCF.p2:22:0.425
chr1	68908886	68908986	reg1023393.p1	5.752	+	TSC_hg19_v1_chr1_-_68698207 BC137109 BC137113 BC110826 AB097018 AK074984 AK301613 BX648748 BX538320 NM_001002292 NM_001193334 AK074583 AK309779 DQ323735 AY359035 NM_024911	-210779	-	BC005362 U96750 NM_004675	-392551	-	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	-609826	-	AK289925 BC075035 BC075036 NM_000329 U18991	6700	-	CU688044 BC065304 BC011743 BC035506 BC041580 TSC_hg19_v1_chr1_-_68962723	53765	-	TSC_hg19_v1_chr1_-_68962766 AK225735 BC003511 AB281187 AB281274 AK000361 AK299324 NM_001114120 NM_017779	53845	-	BC137109|WLS|79971|wntless homolog (Drosophila)##BC137113|WLS|79971|wntless homolog (Drosophila)##BC110826|WLS|79971|wntless homolog (Drosophila)##AB097018|WLS|79971|wntless homolog (Drosophila)##AK074984|WLS|79971|wntless homolog (Drosophila)##AK301613|WLS|79971|wntless homolog (Drosophila)##BX648748|WLS|79971|wntless homolog (Drosophila)##BX538320|WLS|79971|wntless homolog (Drosophila)##NM_001002292|WLS|79971|wntless homolog (Drosophila)##NM_001193334|WLS|79971|wntless homolog (Drosophila)##AK074583|WLS|79971|wntless homolog (Drosophila)##AK309779|WLS|79971|wntless homolog (Drosophila)##DQ323735|WLS|79971|wntless homolog (Drosophila)##AY359035|WLS|79971|wntless homolog (Drosophila)##NM_024911|WLS|79971|wntless homolog (Drosophila)##BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC065304|DEPDC1|55635|DEP domain containing 1##BC011743|DEPDC1|55635|DEP domain containing 1##BC035506|DEPDC1|55635|DEP domain containing 1##BC041580|DEPDC1|55635|DEP domain containing 1##AK225735|DEPDC1|55635|DEP domain containing 1##BC003511|DEPDC1|55635|DEP domain containing 1##AB281187|DEPDC1|55635|DEP domain containing 1##AB281274|DEPDC1|55635|DEP domain containing 1##AK000361|DEPDC1|55635|DEP domain containing 1##AK299324|DEPDC1|55635|DEP domain containing 1##NM_001114120|DEPDC1|55635|DEP domain containing 1##NM_017779|DEPDC1|55635|DEP domain containing 1	0.530317	CTCF.p2:12:0.530
chr2	219122517	219122648	reg1021021.p2	5.752	+	AF006085 NM_005731 AB463393 BT006898	-40426	+	TSC_hg19_v1_chr2_+_219081914 AK290268 BC000590	-40649	+	TSC_hg19_v1_chr2_+_219081905 U50523	-40680	+	AK122660 NM_001077191 NM_001077194 NM_170699 BC033625	3162	+	BC020244 AB209790 BC014122 TSC_hg19_v1_chr2_-_219134838 AK225078	12235	-	TSC_hg19_v1_chr2_-_219134861 BC039866 CR456755 M95627	12272	-	AF006085|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##NM_005731|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##BT006898|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##AK290268|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##BC000590|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##U50523|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##AK122660|GPBAR1|151306|G protein-coupled bile acid receptor 1##NM_001077191|GPBAR1|151306|G protein-coupled bile acid receptor 1##NM_001077194|GPBAR1|151306|G protein-coupled bile acid receptor 1##NM_170699|GPBAR1|151306|G protein-coupled bile acid receptor 1##BC033625|GPBAR1|151306|G protein-coupled bile acid receptor 1##BC020244|AAMP|14|angio-associated, migratory cell protein##AB209790|AAMP|14|angio-associated, migratory cell protein##BC014122|AAMP|14|angio-associated, migratory cell protein##AK225078|AAMP|14|angio-associated, migratory cell protein##BC039866|AAMP|14|angio-associated, migratory cell protein##CR456755|AAMP|14|angio-associated, migratory cell protein##M95627|AAMP|14|angio-associated, migratory cell protein	0.997153	CTCF.p2:13:0.997
chr4	14256000	14256125	reg1024374.p1	5.752	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-626745	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-706648	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-709987	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	747647	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	747933	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	748235	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.0	
chr4	81973735	81973860	reg1020893.p2	5.752	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	-21655	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-716900	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	-785938	+	AB528214 D70899 NM_006259 X94612	152410	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	419186	-	TSC_hg19_v1_chr4_-_82393062 AK291459 BC036784 AK303625 AK056257 NM_152545	419263	-	M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B##AK291459|RASGEF1B|153020|RasGEF domain family, member 1B##BC036784|RASGEF1B|153020|RasGEF domain family, member 1B##AK303625|RASGEF1B|153020|RasGEF domain family, member 1B##AK056257|RASGEF1B|153020|RasGEF domain family, member 1B##NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B	0.81788	CTCF.p2:16:0.818
chr9	104364580	104364684	reg1022884.p1	5.752	+	AF085237 AF145026 BC066299 AK057524 AK302547 AF400667 BC030595 NM_147180 AK310471	-7380	-	TSC_hg19_v1_chr9_+_104296175 AK314401	-68462	+	TSC_hg19_v1_chr9_+_104296143 BC016691 BC063115	-68485	+	TSC_hg19_v1_chr9_-_104500218 AB385519 AF416558 AJ416950	135613	-	AB075853 BC167432 NM_133445 TSC_hg19_v1_chr9_-_104500930	136269	-	BC058038 NM_001340 AK313349 BC114547 Z46788	1392995	+	AF085237|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF145026|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC066299|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AK057524|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF400667|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC030595|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##NM_147180|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AK314401|RNF20|56254|ring finger protein 20##BC016691|RNF20|56254|ring finger protein 20##BC063115|RNF20|56254|ring finger protein 20##AF416558|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AJ416950|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AB075853|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##BC167432|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##NM_133445|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##BC058038|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##NM_001340|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##AK313349|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##BC114547|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##Z46788|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	0.996804	CTCF.p2:-6:0.997
chr10	32097504	32097684	reg1011228.p1	5.751	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-487505	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-489461	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-489637	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	120130	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	120191	-	TSC_hg19_v1_chr10_-_32344938 AB462413	247338	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.0	
chr5	128877474	128877564	reg1026097.p1	5.751	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-81466	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-447094	+	TSC_hg19_v1_chr5_+_128301169 BX537383 NM_014031 NM_001017372 AK313456 AL833117	-576322	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	362968	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	1623412	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	1623471	-	AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##BX537383|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_014031|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_001017372|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AK313456|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AL833117|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1	0.400483	CTCF.p2:-20:0.400
chr5	51303209	51303319	reg1025288.p2	5.751	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	-624011	+	BC031213 NM_002202	-624307	+	TSC_hg19_v1_chr5_+_49962920 AB463183 AM393004	-1340337	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	780725	+	AK025729 BC007650 TSC_hg19_v1_chr5_+_52095991 BC005889 BC007249 AF132951 AK312633 AF139828 BC022789	792722	+	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	981856	+	AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##BC031213|ISL1|3670|ISL LIM homeobox 1##NM_002202|ISL1|3670|ISL LIM homeobox 1##AM393004|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1##AK025729|PELO|53918|pelota homolog (Drosophila)##BC007650|PELO|53918|pelota homolog (Drosophila)##BC005889|PELO|53918|pelota homolog (Drosophila)##BC007249|PELO|53918|pelota homolog (Drosophila)##AF132951|PELO|53918|pelota homolog (Drosophila)##AK312633|PELO|53918|pelota homolog (Drosophila)##AF139828|PELO|53918|pelota homolog (Drosophila)##BC022789|PELO|53918|pelota homolog (Drosophila)##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	0.95319	CTCF.p2:4:0.953
chr19	16556122	16556303	reg1020812.p1	5.750	+	AF134053 TSC_hg19_v1_chr19_+_16435803	-120443	+	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	-120571	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	-247462	+	BC142662 AB527825 AF110265 BC131590 BC037558 TSC_hg19_v1_chr19_-_16582771 AB015346 NM_021235 BC067114 BC051873 BC142716 AK296473 AK297428 AK024166	26564	-	TSC_hg19_v1_chr19_-_16582810 AK291359	26640	-	CU677059 AB576176 DQ890903 DQ894056 AK058084 BC014595 NM_145046	50758	-	AF134053|KLF2|10365|Kruppel-like factor 2 (lung)##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)##AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC142662|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AF110265|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC131590|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC037558|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB015346|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##NM_021235|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC067114|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC051873|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC142716|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK296473|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK297428|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK024166|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK291359|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB576176|CALR3|125972|calreticulin 3##DQ890903|CALR3|125972|calreticulin 3##DQ894056|CALR3|125972|calreticulin 3##AK058084|CALR3|125972|calreticulin 3##BC014595|CALR3|125972|calreticulin 3##NM_145046|CALR3|125972|calreticulin 3	0.731318	CTCF.p2:-105:0.731
chr1	9974591	9974699	reg1023044.p1	5.749	+	TSC_hg19_v1_chr1_-_9970314 AB021262 BC035794 BC014300 NM_001012329 NM_020248	-4336	-	AF438482 NM_001009566 NM_014944 AB020718	-90079	-	TSC_hg19_v1_chr1_-_9884024 BC033902	-90601	-	BC063443 NM_032368	28180	-	TSC_hg19_v1_chr1_-_10003358 AB060688 BC007240 AK304348 AK312550	28728	-	NM_022787 BC014943 TSC_hg19_v1_chr1_+_10003497 AK026065 AK222920	28851	+	AB021262|CTNNBIP1|56998|catenin, beta interacting protein 1##BC014300|CTNNBIP1|56998|catenin, beta interacting protein 1##NM_001012329|CTNNBIP1|56998|catenin, beta interacting protein 1##NM_020248|CTNNBIP1|56998|catenin, beta interacting protein 1##AF438482|CLSTN1|22883|calsyntenin 1##NM_001009566|CLSTN1|22883|calsyntenin 1##NM_014944|CLSTN1|22883|calsyntenin 1##AB020718|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1##BC063443|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##NM_032368|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AB060688|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##BC007240|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK304348|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK312550|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##NM_022787|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##BC014943|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK026065|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK222920|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1	0.079209	
chr6	57445650	57445762	reg1025143.p2	5.749	+	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	-263291	+	TSC_hg19_v1_chr6_-_57087081 AF161486 BC015021 NM_016277 CR749371 AK311123	-358635	-	AB034244 AK313796 NM_183227	-359476	-	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	841973	-	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	5550295	-	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	6584158	-	BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AF161486|RAB23|51715|RAB23, member RAS oncogene family##BC015021|RAB23|51715|RAB23, member RAS oncogene family##NM_016277|RAB23|51715|RAB23, member RAS oncogene family##CR749371|RAB23|51715|RAB23, member RAS oncogene family##AK311123|RAB23|51715|RAB23, member RAS oncogene family##AB034244|RAB23|51715|RAB23, member RAS oncogene family##AK313796|RAB23|51715|RAB23, member RAS oncogene family##NM_183227|RAB23|51715|RAB23, member RAS oncogene family##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	0.990132	CTCF.p2:-6:0.990
chr15	69758396	69758511	reg1027495.p1	5.748	+	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-13232	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-51091	-	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	-51707	+	BC015421 TSC_hg19_v1_chr15_-_70341948	583456	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	631774	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	631790	-	NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.750573	CTCF.p2:7:0.751
chr3	47555255	47555395	reg1021931.p2	5.748	+	DQ787088 BC000623 BC014204 TSC_hg19_v1_chr3_-_47555203 AK225721 AK000218 AK298202 NM_001031703	-183	-	TSC_hg19_v1_chr3_-_47517417 AK291484 D83782 NM_012235	-37893	-	TSC_hg19_v1_chr3_-_47517349 AK300311	-37988	-	AB463496 AF059274 TSC_hg19_v1_chr3_-_47620336 NM_001206943 NM_001206944 NM_006574	64964	-	AK294621 NM_001206942 NM_001206945	66404	-	TSC_hg19_v1_chr3_-_47823302 EU832157 EU832251	267964	-	DQ787088|C3orf75|54859|chromosome 3 open reading frame 75##BC000623|C3orf75|54859|chromosome 3 open reading frame 75##BC014204|C3orf75|54859|chromosome 3 open reading frame 75##AK225721|C3orf75|54859|chromosome 3 open reading frame 75##AK000218|C3orf75|54859|chromosome 3 open reading frame 75##AK298202|C3orf75|54859|chromosome 3 open reading frame 75##NM_001031703|C3orf75|54859|chromosome 3 open reading frame 75##AK291484|SCAP|22937|SREBF chaperone##D83782|SCAP|22937|SREBF chaperone##NM_012235|SCAP|22937|SREBF chaperone##AK300311|SCAP|22937|SREBF chaperone##AF059274|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_001206943|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_001206944|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_006574|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##AK294621|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_001206942|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##NM_001206945|CSPG5|10675|chondroitin sulfate proteoglycan 5 (neuroglycan C)##EU832157|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1##EU832251|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1	0.340172	CTCF.p2:7:0.340
chr7	120497667	120497793	reg1024561.p1	5.748	+	AK307139 AB028967 NM_012281	-584026	+	NM_019644 AK302407	-2632996	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-2673559	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	290	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	430	-	AK000096 NM_019071 NM_198267 TSC_hg19_v1_chr7_+_120590832 AF161419 BC009777 BC093091 AY007790 AK291905 AF074968 BC073865 AF180298 BC062634 BC093689 BC101609 BC143316 BC009776 BC010851 BC146417 BC153171 AB463778	93151	+	AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12##AK000096|ING3|54556|inhibitor of growth family, member 3##NM_019071|ING3|54556|inhibitor of growth family, member 3##NM_198267|ING3|54556|inhibitor of growth family, member 3##AF161419|ING3|54556|inhibitor of growth family, member 3##BC009777|ING3|54556|inhibitor of growth family, member 3##BC093091|ING3|54556|inhibitor of growth family, member 3##AY007790|ING3|54556|inhibitor of growth family, member 3##AK291905|ING3|54556|inhibitor of growth family, member 3##AF074968|ING3|54556|inhibitor of growth family, member 3##BC073865|ING3|54556|inhibitor of growth family, member 3##AF180298|ING3|54556|inhibitor of growth family, member 3##BC062634|ING3|54556|inhibitor of growth family, member 3##BC093689|ING3|54556|inhibitor of growth family, member 3##BC101609|ING3|54556|inhibitor of growth family, member 3##BC143316|ING3|54556|inhibitor of growth family, member 3##BC009776|ING3|54556|inhibitor of growth family, member 3##BC010851|ING3|54556|inhibitor of growth family, member 3##BC146417|ING3|54556|inhibitor of growth family, member 3##BC153171|ING3|54556|inhibitor of growth family, member 3	0.011046	
chr1	12203810	12203970	reg1024386.p1	5.747	+	D86042 BC063482 NM_152942 BC073839 BC141804	-17874	+	M83554 NM_001243 BC136400 BC171762 S75768	-80346	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-124320	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	23171	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	23221	+	TSC_hg19_v1_chr1_+_12290088 NM_015378 NM_018156 AJ608774 AJ608775 AL162331	86217	+	D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_015378|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_018156|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608774|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608775|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AL162331|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)	0.0	
chr1	29667552	29667663	reg1023867.p2	5.747	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-104559	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-110160	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-110227	-	TSC_hg19_v1_chr1_+_31191648 AK057725	1524024	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	1528825	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	1563025	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	0.58967	CTCF.p2:5:0.590
chr6	31514511	31514636	reg1024229.p1	5.747	+	TSC_hg19_v1_chr6_-_31514400 BC047791	-170	-	BC068023 TSC_hg19_v1_chr6_-_31514344 BC004350	-238	-	NM_004640 NM_080598	-4322	-	BC119726 BC119727 NM_001204078 NM_130463 NM_138282	49	-	NM_001144962 NM_001144963 AK300818	87	+	AK291893 NM_001144961 NM_005007 TSC_hg19_v1_chr6_+_31515371	797	+	BC047791|ATP6V1G2|534|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2##BC068023|ATP6V1G2|534|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2##BC004350|ATP6V1G2-DDX39B|100532737|ATP6V1G2-DDX39B readthrough (non-protein coding)##NM_004640|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B##NM_080598|DDX39B|7919|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B##BC119726|ATP6V1G2|534|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2##BC119727|ATP6V1G2|534|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2##NM_001204078|ATP6V1G2|534|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2##NM_130463|ATP6V1G2|534|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2##NM_138282|ATP6V1G2|534|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2##NM_001144962|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##NM_001144963|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AK300818|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##AK291893|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##NM_001144961|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1##NM_005007|NFKBIL1|4795|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1	0.013387	
chr1	1590777	1590898	reg1024278.p2	5.746	+	BC054019 TSC_hg19_v1_chr1_-_1590434 BC104661 BC009375	-384	-	AK297700 AB010962 AJ005256 NM_006983 BC025719 AB010961 AF056200	-23267	+	TSC_hg19_v1_chr1_+_1551275 NM_001170689 AK128167 BC035109 AK098785	-39537	+	TSC_hg19_v1_chr1_-_1623947 CR936618 BC062371	33128	-	BC092507 TSC_hg19_v1_chr1_-_1624149 AK125619	33321	-	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	33380	-	BC054019|CDK11A|728642|cyclin-dependent kinase 11A##BC104661|CDK11A|728642|cyclin-dependent kinase 11A##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AK297700|MMP23B|8510|matrix metallopeptidase 23B##AB010962|MMP23B|8510|matrix metallopeptidase 23B##AJ005256|MMP23B|8510|matrix metallopeptidase 23B##NM_006983|MMP23B|8510|matrix metallopeptidase 23B##BC025719|MMP23B|8510|matrix metallopeptidase 23B##AB010961|MMP23B|8510|matrix metallopeptidase 23B##AF056200|MMP23B|8510|matrix metallopeptidase 23B##NM_001170689|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK128167|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC035109|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK098785|MIB2|142678|mindbomb homolog 2 (Drosophila)##CR936618|SLC35E2B|728661|solute carrier family 35, member E2B##BC062371|SLC35E2|9906|solute carrier family 35, member E2##BC092507|SLC35E2B|728661|solute carrier family 35, member E2B##AK125619|SLC35E2B|728661|solute carrier family 35, member E2B##AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B	0.039695	
chr1	16405668	16405849	reg1001851.p2	5.746	+	AB463624 CU691488 AK094085 BC037394 TSC_hg19_v1_chr1_-_16400144 BC016848 NM_182623	-5701	-	AK098217 NM_001165945	-30475	+	NM_000085 AK292335 BC020873 BC033806 Z30644	-35460	+	EU826606 DQ895231 EU176326 TSC_hg19_v1_chr1_-_16482565 M59371 BC037166 AK296788 NM_004431	76768	-	BC040640 NM_153213 AK091281 AX746893 AK297707	133376	-	NM_030907	157900	-	AK094085|FAM131C|348487|family with sequence similarity 131, member C##BC037394|FAM131C|348487|family with sequence similarity 131, member C##BC016848|FAM131C|348487|family with sequence similarity 131, member C##NM_182623|FAM131C|348487|family with sequence similarity 131, member C##AK098217|CLCNKB|1188|chloride channel Kb##NM_001165945|CLCNKB|1188|chloride channel Kb##NM_000085|CLCNKB|1188|chloride channel Kb##AK292335|CLCNKB|1188|chloride channel Kb##BC020873|CLCNKB|1188|chloride channel Kb##BC033806|CLCNKB|1188|chloride channel Kb##Z30644|CLCNKB|1188|chloride channel Kb##EU826606|EPHA2|1969|EPH receptor A2##DQ895231|EPHA2|1969|EPH receptor A2##EU176326|EPHA2|1969|EPH receptor A2##M59371|EPHA2|1969|EPH receptor A2##BC037166|EPHA2|1969|EPH receptor A2##AK296788|EPHA2|1969|EPH receptor A2##NM_004431|EPHA2|1969|EPH receptor A2##BC040640|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##NM_153213|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK091281|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##AK297707|ARHGEF19|128272|Rho guanine nucleotide exchange factor (GEF) 19##NM_030907|RSG1|79363|REM2 and RAB-like small GTPase 1	0.0	
chr2	71012589	71012680	reg1022979.p1	5.746	+	TSC_hg19_v1_chr2_-_70995330 BC056881 BC051882 BC010237 BC041666 BC027876 AK297250 AK309773 AK291007 AB209227 AB593080 NM_001185055 NM_001617 NM_017482 NM_017488	-17343	-	BC065525 NM_001185054	-17788	-	NM_001099691 NM_003236	-231488	-	BC039536 AB463644 AY541030 NM_001004311	5118	-	BC139723 BC144652 AK096429 AK301242 NM_173535	35070	-	CU692528 DQ891964 DQ895154 AK314927 BC022278 AJ242859 NM_015717	50294	-	BC056881|ADD2|119|adducin 2 (beta)##BC051882|ADD2|119|adducin 2 (beta)##BC010237|ADD2|119|adducin 2 (beta)##BC041666|ADD2|119|adducin 2 (beta)##BC027876|ADD2|119|adducin 2 (beta)##AK297250|ADD2|119|adducin 2 (beta)##AK309773|ADD2|119|adducin 2 (beta)##AK291007|ADD2|119|adducin 2 (beta)##AB209227|ADD2|119|adducin 2 (beta)##AB593080|ADD2|119|adducin 2 (beta)##NM_001185055|ADD2|119|adducin 2 (beta)##NM_001617|ADD2|119|adducin 2 (beta)##NM_017482|ADD2|119|adducin 2 (beta)##NM_017488|ADD2|119|adducin 2 (beta)##BC065525|ADD2|119|adducin 2 (beta)##NM_001185054|ADD2|119|adducin 2 (beta)##NM_001099691|TGFA|7039|transforming growth factor, alpha##NM_003236|TGFA|7039|transforming growth factor, alpha##BC039536|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##AY541030|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##NM_001004311|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##BC139723|CLEC4F|165530|C-type lectin domain family 4, member F##BC144652|CLEC4F|165530|C-type lectin domain family 4, member F##AK096429|CLEC4F|165530|C-type lectin domain family 4, member F##AK301242|CLEC4F|165530|C-type lectin domain family 4, member F##NM_173535|CLEC4F|165530|C-type lectin domain family 4, member F##DQ891964|CD207|50489|CD207 molecule, langerin##DQ895154|CD207|50489|CD207 molecule, langerin##AK314927|CD207|50489|CD207 molecule, langerin##BC022278|CD207|50489|CD207 molecule, langerin##AJ242859|CD207|50489|CD207 molecule, langerin##NM_015717|CD207|50489|CD207 molecule, langerin	0.131821	
chr3	184998639	184998813	reg1025154.p2	5.746	+	BC038948 BC110460 L07077 AK301521 TSC_hg19_v1_chr3_-_184971838 AK223460 AK291798 BC011030 BC030982 NM_001166415 NM_001966	-26876	-	TSC_hg19_v1_chr3_-_184870849 AK091454 AX746993 NM_001025266	-127928	-	TSC_hg19_v1_chr3_-_184870632 BC137178 BC137179 BC150565	-128073	-	TSC_hg19_v1_chr3_+_185000783 NM_001242314 NM_001242317 AK297646 BC036593 AK312714 BC015996	2023	+	AK302951 TSC_hg19_v1_chr3_+_185046682 BC031677	47965	+	BC026249 NM_004721 AK296961 AB001872 BC111726	82206	+	BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001025266|C3orf70|285382|chromosome 3 open reading frame 70##BC137178|C3orf70|285382|chromosome 3 open reading frame 70##BC137179|C3orf70|285382|chromosome 3 open reading frame 70##BC150565|C3orf70|285382|chromosome 3 open reading frame 70##NM_001242314|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_001242317|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK297646|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC036593|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK312714|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC015996|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK302951|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC031677|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13	0.978692	CTCF.p2:18:0.979
chr13	59836392	59836495	reg1025130.p2	5.745	+	TSC_hg19_v1_chr13_+_58207858 AK307545	-1628547	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	-1630496	+	NM_001040429	-1630655	+	BC041395 TSC_hg19_v1_chr13_-_60325215	488701	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	750877	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	901538	-	AK307545|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##NM_001040429|PCDH17|27253|protocadherin 17##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	0.907803	CTCF.p2:1:0.908
chr8	144818794	144818872	reg1021950.p1	5.745	+	TSC_hg19_v1_chr8_+_144816308 AK124079	-2531	+	TSC_hg19_v1_chr8_-_144815943 NM_198488 HM481257	-2892	-	TSC_hg19_v1_chr8_-_144812920 HM481256	-5839	-	TSC_hg19_v1_chr8_+_144824624 AK091211 AX746851	5799	+	AF240677 D63481 AB383767 AY062238 NM_015356 NM_182706	78711	-	TSC_hg19_v1_chr8_-_144911203 BC011265 NM_001136033 BC009734	92374	-	AK124079|LOC100128338|100128338|uncharacterized LOC100128338##NM_198488|FAM83H|286077|family with sequence similarity 83, member H##AK091211|LOC100128338|100128338|uncharacterized LOC100128338##AF240677|SCRIB|23513|scribbled homolog (Drosophila)##D63481|SCRIB|23513|scribbled homolog (Drosophila)##AY062238|SCRIB|23513|scribbled homolog (Drosophila)##NM_015356|SCRIB|23513|scribbled homolog (Drosophila)##NM_182706|SCRIB|23513|scribbled homolog (Drosophila)##BC011265|PUF60|22827|poly-U binding splicing factor 60KDa##NM_001136033|PUF60|22827|poly-U binding splicing factor 60KDa##BC009734|PUF60|22827|poly-U binding splicing factor 60KDa	0.259744	CTCF.p2:12:0.260
chr9	109900005	109900155	reg1022197.p1	5.745	+	TSC_hg19_v1_chr9_+_109686439 CR749850	-213611	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	-274716	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-1443162	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	145452	+	TSC_hg19_v1_chr9_+_110045559 AK125226 AK223479	145477	+	TSC_hg19_v1_chr9_+_110045567 D21090	145522	+	CR749850|ZNF462|58499|zinc finger protein 462##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK125226|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK223479|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##D21090|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.990073	CTCF.p2:-4:0.990
chr10	95618890	95619070	reg1025381.p2	5.744	+	NM_005097 BC022500 AF055636 AF473548 AK309416 AY358885 AK303956	-101334	+	TSC_hg19_v1_chr10_-_95462320 AJ431721 AJ431722 AJ431723 AJ431724 AJ431725 AK090955 AX746703 NM_145246	-156645	-	NM_006204 U31973 BC111377	-246573	+	TSC_hg19_v1_chr10_+_95653753 AK091309 AX746907 NM_001134658 NM_153226 BC036382 BC058549 BC143283 BC143284 BC104814 BC047102	34760	+	TSC_hg19_v1_chr10_+_95753696 AB040949 BC151854 NM_016341	134734	+	AK297779 AK289852 NM_001165979 AF170071	229851	+	NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1##BC022500|LGI1|9211|leucine-rich, glioma inactivated 1##AF055636|LGI1|9211|leucine-rich, glioma inactivated 1##AF473548|LGI1|9211|leucine-rich, glioma inactivated 1##AK309416|LGI1|9211|leucine-rich, glioma inactivated 1##AY358885|LGI1|9211|leucine-rich, glioma inactivated 1##AK303956|LGI1|9211|leucine-rich, glioma inactivated 1##AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_006204|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##U31973|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##BC111377|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##AK091309|SLC35G1|159371|solute carrier family 35, member G1##NM_001134658|SLC35G1|159371|solute carrier family 35, member G1##NM_153226|SLC35G1|159371|solute carrier family 35, member G1##BC036382|SLC35G1|159371|solute carrier family 35, member G1##BC143284|SLC35G1|159371|solute carrier family 35, member G1##BC104814|SLC35G1|159371|solute carrier family 35, member G1##BC047102|SLC35G1|159371|solute carrier family 35, member G1##AB040949|PLCE1|51196|phospholipase C, epsilon 1##BC151854|PLCE1|51196|phospholipase C, epsilon 1##NM_016341|PLCE1|51196|phospholipase C, epsilon 1##AK297779|PLCE1|51196|phospholipase C, epsilon 1##AK289852|PLCE1|51196|phospholipase C, epsilon 1##NM_001165979|PLCE1|51196|phospholipase C, epsilon 1##AF170071|PLCE1|51196|phospholipase C, epsilon 1	0.945693	CTCF.p2:14:0.946
chr16	71535651	71535758	reg1023951.p2	5.744	+	AK292260 BC030658 AK057330 BC047091 NM_006961	-12489	-	AK123826 TSC_hg19_v1_chr16_+_71496196	-39516	+	TSC_hg19_v1_chr16_-_71496127 AF507946 BC007256 NM_145911 BC048974 AK091039 AX746746 AK297130	-39583	-	NM_005769 AF131235 NM_001166395 AK026635 AK074746	24389	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	75268	-	BC005052 NM_001017967 NM_052858 AK307585 BC011893 BC013376 AK056842 AK292185 CU680584	124393	+	AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19##AF507946|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC007256|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_145911|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC048974|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK091039|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK297130|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase##BC005052|MARVELD3|91862|MARVEL domain containing 3##NM_001017967|MARVELD3|91862|MARVEL domain containing 3##NM_052858|MARVELD3|91862|MARVEL domain containing 3##AK307585|MARVELD3|91862|MARVEL domain containing 3##BC011893|MARVELD3|91862|MARVEL domain containing 3##BC013376|MARVELD3|91862|MARVEL domain containing 3##AK056842|MARVELD3|91862|MARVEL domain containing 3##AK292185|MARVELD3|91862|MARVEL domain containing 3	0.190752	
chr4	174427153	174427245	reg1021496.p1	5.744	+	AJ224677 NM_007281	-106583	-	TSC_hg19_v1_chr4_+_174292104 BC016757	-135091	+	TSC_hg19_v1_chr4_+_174292088 NM_003864 AF055993	-135136	+	AF087940 TSC_hg19_v1_chr4_-_174450385 AB464563	23192	-	BC101406 BC101974 BC109383 TSC_hg19_v1_chr4_-_174450570	23351	-	TSC_hg19_v1_chr4_-_174451381 NM_021973 AK122739 FJ226608	24170	-	AJ224677|SCRG1|11341|stimulator of chondrogenesis 1##NM_007281|SCRG1|11341|stimulator of chondrogenesis 1##BC016757|SAP30|8819|Sin3A-associated protein, 30kDa##NM_003864|SAP30|8819|Sin3A-associated protein, 30kDa##AF055993|SAP30|8819|Sin3A-associated protein, 30kDa##AF087940|HAND2|9464|heart and neural crest derivatives expressed 2##BC101406|HAND2|9464|heart and neural crest derivatives expressed 2##BC101974|HAND2|9464|heart and neural crest derivatives expressed 2##BC109383|HAND2|9464|heart and neural crest derivatives expressed 2##NM_021973|HAND2|9464|heart and neural crest derivatives expressed 2##AK122739|HAND2|9464|heart and neural crest derivatives expressed 2##FJ226608|HAND2|9464|heart and neural crest derivatives expressed 2	0.016826	
chr4	9093111	9093263	reg1028441.p1	5.744	+	NM_001040071	-141711	+	AB593128 M99587 NM_018942	-219690	-	U83411 TSC_hg19_v1_chr4_+_8594521	-498664	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	123942	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	152416	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	166661	+	NM_001040071|LOC650293|650293|seven transmembrane helix receptor##M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.010782	
chr7	73621257	73621385	reg1001127.p2	5.744	+	TSC_hg19_v1_chr7_+_73588685 AK290676 BC066928 D26068 NM_022170 NM_031992 BC010021 BC021214 AB385268 DQ891924 DQ895111 DQ895112	-32618	+	TSC_hg19_v1_chr7_+_73588678 AK314749 AK297651	-32680	+	NM_001204426 TSC_hg19_v1_chr7_+_73507550 AK300382	-113804	+	NM_014146 NM_032463 NM_032464	2765	+	TSC_hg19_v1_chr7_+_73624283 BC001609 AK002099 BC006080	2961	+	TSC_hg19_v1_chr7_+_73624338 AF161531 AF252611 AF252612 AF252614 AK225150 AK290074 AK290916	3015	+	AK290676|EIF4H|7458|eukaryotic translation initiation factor 4H##BC066928|EIF4H|7458|eukaryotic translation initiation factor 4H##D26068|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_022170|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_031992|EIF4H|7458|eukaryotic translation initiation factor 4H##BC010021|EIF4H|7458|eukaryotic translation initiation factor 4H##BC021214|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ891924|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ895111|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ895112|EIF4H|7458|eukaryotic translation initiation factor 4H##AK314749|EIF4H|7458|eukaryotic translation initiation factor 4H##AK297651|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_001204426|LIMK1|3984|LIM domain kinase 1##AK300382|LIMK1|3984|LIM domain kinase 1##NM_014146|LAT2|7462|linker for activation of T cells family, member 2##NM_032463|LAT2|7462|linker for activation of T cells family, member 2##NM_032464|LAT2|7462|linker for activation of T cells family, member 2##BC001609|LAT2|7462|linker for activation of T cells family, member 2##AK002099|LAT2|7462|linker for activation of T cells family, member 2##BC006080|LAT2|7462|linker for activation of T cells family, member 2##AF161531|LAT2|7462|linker for activation of T cells family, member 2##AF252611|LAT2|7462|linker for activation of T cells family, member 2##AF252612|LAT2|7462|linker for activation of T cells family, member 2##AF252614|LAT2|7462|linker for activation of T cells family, member 2##AK225150|LAT2|7462|linker for activation of T cells family, member 2##AK290074|LAT2|7462|linker for activation of T cells family, member 2##AK290916|LAT2|7462|linker for activation of T cells family, member 2	0.160319	
chr12	57870135	57870254	reg1023222.p1	5.743	+	AK297899 NM_001160045 NM_001167609 NM_005269 X07384 AB239135 AB239136	-16252	+	TSC_hg19_v1_chr12_+_57849089 NM_031479 AK075285 BC005161 AF412024	-21096	+	TSC_hg19_v1_chr12_+_57828511 AK314849 BC020693 NM_005538 X82540 BC130324 BC130326 AB590801	-41631	+	AK301095 AK057573 AB030239 NM_001080156	1485	-	TSC_hg19_v1_chr12_-_57873391 AK092763 AX747713 NM_001080157	3200	-	AK304107 AB051853 NM_032496	3436	-	AK297899|GLI1|2735|GLI family zinc finger 1##NM_001160045|GLI1|2735|GLI family zinc finger 1##NM_001167609|GLI1|2735|GLI family zinc finger 1##NM_005269|GLI1|2735|GLI family zinc finger 1##X07384|GLI1|2735|GLI family zinc finger 1##AB239135|GLI1|2735|GLI family zinc finger 1##AB239136|GLI1|2735|GLI family zinc finger 1##NM_031479|INHBE|83729|inhibin, beta E##AK075285|INHBE|83729|inhibin, beta E##BC005161|INHBE|83729|inhibin, beta E##AF412024|INHBE|83729|inhibin, beta E##AK314849|INHBC|3626|inhibin, beta C##BC020693|INHBC|3626|inhibin, beta C##NM_005538|INHBC|3626|inhibin, beta C##BC130324|INHBC|3626|inhibin, beta C##BC130326|INHBC|3626|inhibin, beta C##AK301095|ARHGAP9|64333|Rho GTPase activating protein 9##AK057573|ARHGAP9|64333|Rho GTPase activating protein 9##AB030239|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080156|ARHGAP9|64333|Rho GTPase activating protein 9##AK092763|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9##AK304107|ARHGAP9|64333|Rho GTPase activating protein 9##AB051853|ARHGAP9|64333|Rho GTPase activating protein 9##NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9	0.364887	CTCF.p2:-37:0.365
chr19	46145487	46145619	reg1005154.p1	5.743	+	NM_001242348 BC007358	-627	+	TSC_hg19_v1_chr19_-_46142667 AF103939 NM_012155	-2879	-	AL096717 TSC_hg19_v1_chr19_-_46142656 BC032630 AK026616 AK308403 AK304299 AK225043	-2902	-	AK295905 NM_001193269	1431	-	AK308580 AK296258 AK294668 NM_001193268 BC029304	3170	-	NM_000164 U39231 BC093723 BC101673 BC143300 BC143302 S79852	25954	+	NM_001242348|LOC100287177|100287177|uncharacterized LOC100287177##BC007358|LOC100287177|100287177|uncharacterized LOC100287177##AF103939|EML2|24139|echinoderm microtubule associated protein like 2##NM_012155|EML2|24139|echinoderm microtubule associated protein like 2##AL096717|EML2|24139|echinoderm microtubule associated protein like 2##BC032630|EML2|24139|echinoderm microtubule associated protein like 2##AK026616|EML2|24139|echinoderm microtubule associated protein like 2##AK308403|EML2|24139|echinoderm microtubule associated protein like 2##AK304299|EML2|24139|echinoderm microtubule associated protein like 2##AK225043|EML2|24139|echinoderm microtubule associated protein like 2##AK295905|EML2|24139|echinoderm microtubule associated protein like 2##NM_001193269|EML2|24139|echinoderm microtubule associated protein like 2##AK296258|EML2|24139|echinoderm microtubule associated protein like 2##AK294668|EML2|24139|echinoderm microtubule associated protein like 2##NM_001193268|EML2|24139|echinoderm microtubule associated protein like 2##BC029304|EML2|24139|echinoderm microtubule associated protein like 2##NM_000164|GIPR|2696|gastric inhibitory polypeptide receptor##U39231|GIPR|2696|gastric inhibitory polypeptide receptor##BC093723|GIPR|2696|gastric inhibitory polypeptide receptor##BC101673|GIPR|2696|gastric inhibitory polypeptide receptor##BC143300|GIPR|2696|gastric inhibitory polypeptide receptor##BC143302|GIPR|2696|gastric inhibitory polypeptide receptor##S79852|GIPR|2696|gastric inhibitory polypeptide receptor	0.0	
chr11	22942633	22942747	reg1025935.p1	5.742	+	NM_001195637	-60719	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-91345	-	TSC_hg19_v1_chr11_+_22696382 CU680566 AB590780 CR450285	-246292	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	1575959	+	NM_031418 AK302659	3411040	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	3651050	-	NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##CR450285|GAS2|2620|growth arrest-specific 2##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated	0.96455	CTCF.p2:-7:0.965
chr1	53387409	53387525	reg1024353.p2	5.742	+	TSC_hg19_v1_chr1_-_53387399 CU692200 BC038389 BC044574 AK315906 AK310650 AK001810	-98	-	TSC_hg19_v1_chr1_-_53387217 AK300896 AK299834	-240	-	AY271826 NM_001004339	-79285	+	TSC_hg19_v1_chr1_-_53387413 BC051887 BC040480 NM_001198961 NM_001198962 NM_018281 AK309535	26	-	NM_001007098 NM_001193599 NM_001193600 NM_001193617 NM_002979 TSC_hg19_v1_chr1_+_53392947 AB208789 AK312856	5457	+	AK294631 AK295214 AK308105 TSC_hg19_v1_chr1_+_53392957	5503	+	BC038389|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC044574|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK315906|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK310650|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK001810|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK300896|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK299834|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AY271826|ZYG11A|440590|zyg-11 homolog A (C. elegans)##NM_001004339|ZYG11A|440590|zyg-11 homolog A (C. elegans)##BC051887|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC040480|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_001198961|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_001198962|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_018281|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK309535|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_001007098|SCP2|6342|sterol carrier protein 2##NM_001193599|SCP2|6342|sterol carrier protein 2##NM_001193600|SCP2|6342|sterol carrier protein 2##NM_001193617|SCP2|6342|sterol carrier protein 2##NM_002979|SCP2|6342|sterol carrier protein 2##AB208789|SCP2|6342|sterol carrier protein 2##AK312856|SCP2|6342|sterol carrier protein 2##AK294631|SCP2|6342|sterol carrier protein 2##AK295214|SCP2|6342|sterol carrier protein 2##AK308105|SCP2|6342|sterol carrier protein 2	0.0	
chr19	17237218	17237398	reg1021598.p4	5.742	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-50715	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-50987	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-99768	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	88864	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	88897	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	99726	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.0	
chr21	17454833	17454977	reg1022460.p1	5.742	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	-352364	+	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	-352580	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	-1017688	-	TSC_hg19_v1_chr21_+_18885168 NM_001207063 NM_001207064 NM_001207065 NM_001207066 NM_001338	1430258	+	TSC_hg19_v1_chr21_+_18885364 BC003684 AK313526 BC010536 Y07593 DQ891181 DQ894363 AF124598 AY072910 AY072911 AY072912 BT019876 GU474812 U90716	1430466	+	D64110 TSC_hg19_v1_chr21_-_18985177 BC011957	1530235	-	NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor##BC003684|CXADR|1525|coxsackie virus and adenovirus receptor##AK313526|CXADR|1525|coxsackie virus and adenovirus receptor##BC010536|CXADR|1525|coxsackie virus and adenovirus receptor##Y07593|CXADR|1525|coxsackie virus and adenovirus receptor##DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor##DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor##AF124598|CXADR|1525|coxsackie virus and adenovirus receptor##AY072910|CXADR|1525|coxsackie virus and adenovirus receptor##AY072911|CXADR|1525|coxsackie virus and adenovirus receptor##AY072912|CXADR|1525|coxsackie virus and adenovirus receptor##BT019876|CXADR|1525|coxsackie virus and adenovirus receptor##GU474812|CXADR|1525|coxsackie virus and adenovirus receptor##U90716|CXADR|1525|coxsackie virus and adenovirus receptor##D64110|BTG3|10950|BTG family, member 3##BC011957|BTG3|10950|BTG family, member 3	0.999214	CTCF.p2:42:0.999
chr3	32823061	32823190	reg1025628.p1	5.742	+	TSC_hg19_v1_chr3_+_32726700 AK023227 AK022952 NM_015442 AK309670 BC006382 BC002931 BC002928 AK297085 AK298693 CU678296 CU678298 DQ892895 DQ896143 EU831494 EU831581	-96320	+	BX649189 TSC_hg19_v1_chr3_-_32612288 AK222573 AK222653 BC131620 AF078849 AK074348 AK293253 NM_016141	-210851	-	BC002797 TSC_hg19_v1_chr3_-_32544365 NM_017801	-278745	-	DQ232881 NM_001039111	36384	+	BC071751 NM_005508 AK292674	169975	+	TSC_hg19_v1_chr3_-_33138279 AK300021 AK126979 AK128242 NM_001039770 NM_001136238	315145	-	AK023227|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK022952|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##NM_015442|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK309670|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC006382|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002931|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002928|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK297085|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK298693|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ892895|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ896143|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831494|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831581|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC002797|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##NM_017801|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##DQ232881|TRIM71|131405|tripartite motif containing 71##NM_001039111|TRIM71|131405|tripartite motif containing 71##BC071751|CCR4|1233|chemokine (C-C motif) receptor 4##NM_005508|CCR4|1233|chemokine (C-C motif) receptor 4##AK292674|CCR4|1233|chemokine (C-C motif) receptor 4##AK300021|GLB1|2720|galactosidase, beta 1##AK126979|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##AK128242|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001039770|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001136238|TMPPE|643853|transmembrane protein with metallophosphoesterase domain	0.798663	CTCF.p2:14:0.799
chr5	53539469	53539594	reg1022468.p1	5.742	+	TSC_hg19_v1_chr5_+_52856474 AF020351 AK307973 CU675075	-683045	+	TSC_hg19_v1_chr5_+_52856468 NM_002495 BC005270	-683067	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	-762981	+	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	66794	-	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	66871	-	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	211993	+	AF020351|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK307973|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##NM_002495|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##BC005270|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3	0.0	
chr7	34131080	34131196	reg1022989.p2	5.742	+	AK289963 NM_133468 AK096150 BC060868	-185996	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-962057	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-982161	-	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	566781	+	DQ287932 NM_015283	946514	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	1094654	-	AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)	0.99187	CTCF.p2:-10:0.992
chr8	71520674	71520774	reg1019527.p2	5.742	+	TSC_hg19_v1_chr8_-_71520654 AK303411 NM_014294	-68	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	-202	-	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	-204698	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	60660	-	TSC_hg19_v1_chr8_-_71581419 BC000878 BC008505 NM_016027	60725	-	AY534247 BC111381 NM_001011720 BC151845 BC137104 BC137105	60916	+	AK303411|TRAM1|23471|translocation associated membrane protein 1##NM_014294|TRAM1|23471|translocation associated membrane protein 1##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1##NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2##BC000878|LACTB2|51110|lactamase, beta 2##BC008505|LACTB2|51110|lactamase, beta 2##NM_016027|LACTB2|51110|lactamase, beta 2##AY534247|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC111381|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##NM_001011720|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC151845|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137104|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137105|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9	0.413728	CTCF.p2:-9:0.414
chr2	150571844	150571961	reg1024738.p2	5.741	+	TSC_hg19_v1_chr2_-_150444290 NM_015702	-127595	-	TSC_hg19_v1_chr2_-_150444250 BC023995 BC010894 AK310001 AF161510 BC022859 BC000932	-127645	-	AF131802 TSC_hg19_v1_chr2_-_150444230 AK313284	-127677	-	X97758 BC012513 TSC_hg19_v1_chr2_-_151344182 AK298007 AK311312 NM_005168 AK313224	772262	-	TSC_hg19_v1_chr2_-_152118378 BC136410 BC136411 AK127552 NM_198557	1546431	-	TSC_hg19_v1_chr2_-_152146171 BC001268	1574250	-	NM_015702|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC023995|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC010894|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK310001|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF161510|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC022859|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC000932|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF131802|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK313284|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##X97758|RND3|390|Rho family GTPase 3##BC012513|RND3|390|Rho family GTPase 3##AK298007|RND3|390|Rho family GTPase 3##NM_005168|RND3|390|Rho family GTPase 3##AK313224|RND3|390|Rho family GTPase 3##BC136410|RBM43|375287|RNA binding motif protein 43##BC136411|RBM43|375287|RNA binding motif protein 43##AK127552|RBM43|375287|RNA binding motif protein 43##NM_198557|RBM43|375287|RNA binding motif protein 43##BC001268|NMI|9111|N-myc (and STAT) interactor	0.01175	
chr2	16811862	16811999	reg1025293.p2	5.741	+	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-729763	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-729935	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	-730157	-	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	35214	-	DQ860102 NM_001099218	887775	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	909957	+	BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1	0.0	
chr4	65579112	65579221	reg1020468.p2	5.741	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	-304070	-	NM_015236	-3216328	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-3512191	+	AK307826 NM_004439 NM_182472	956486	-	TSC_hg19_v1_chr4_-_66536182 AB209375	957031	-	CU688992 TSC_hg19_v1_chr4_-_68411171	2831957	-	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.916128	CTCF.p2:-1:0.916
chr7	137687214	137687340	reg1021616.p1	5.741	+	TSC_hg19_v1_chr7_-_137686833 NM_001253775 NM_194071	-425	-	AK131517 TSC_hg19_v1_chr7_-_137686812	-465	-	AK293048 BC110813 TSC_hg19_v1_chr7_-_137686800 BC063666 AJ549092 AJ549387	-483	-	AK298421 NM_001190906 NM_001190907 NM_005989 Z28339 AK298428 BC130625 BC130627 AK289425 HQ258384	73941	+	TSC_hg19_v1_chr7_+_138145003 AK312610 AK075306 NM_003852 NM_015905 AK302679	457715	+	AF119042 BC028689 TSC_hg19_v1_chr7_+_138145183 AB528587 AF009353	457959	+	NM_001253775|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_194071|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK131517|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK293048|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC110813|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC063666|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549092|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549387|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK298421|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190906|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190907|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_005989|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##Z28339|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK298428|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130625|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130627|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK289425|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##HQ258384|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK312610|TRIM24|8805|tripartite motif containing 24##AK075306|TRIM24|8805|tripartite motif containing 24##NM_003852|TRIM24|8805|tripartite motif containing 24##NM_015905|TRIM24|8805|tripartite motif containing 24##AK302679|TRIM24|8805|tripartite motif containing 24##AF119042|TRIM24|8805|tripartite motif containing 24##BC028689|TRIM24|8805|tripartite motif containing 24##AF009353|TRIM24|8805|tripartite motif containing 24	0.222537	CTCF.p2:-37:0.223
chr4	128918773	128918884	reg1025886.p1	5.740	+	AK294184 AK294527 BC029503 AK294957 NM_152778	-31713	-	TSC_hg19_v1_chr4_+_128886618 AK024759 BC058847 BC075793 BC128142 BC128143	-32189	+	TSC_hg19_v1_chr4_+_128886524 BC111400 NM_001039717 BC058898 BC034253	-32372	+	TSC_hg19_v1_chr4_+_128982466 AK310421 AK092764 AX747714	63614	+	TSC_hg19_v1_chr4_+_128982483 BC002840 BC018794 BC110300	63658	+	AL832170 NM_018078 NM_032239 NM_178043 TSC_hg19_v1_chr4_+_128982502	63674	+	AK294184|MFSD8|256471|major facilitator superfamily domain containing 8##AK294527|MFSD8|256471|major facilitator superfamily domain containing 8##BC029503|MFSD8|256471|major facilitator superfamily domain containing 8##AK294957|MFSD8|256471|major facilitator superfamily domain containing 8##NM_152778|MFSD8|256471|major facilitator superfamily domain containing 8##AK024759|C4orf29|80167|chromosome 4 open reading frame 29##BC058847|C4orf29|80167|chromosome 4 open reading frame 29##BC075793|C4orf29|80167|chromosome 4 open reading frame 29##BC128142|C4orf29|80167|chromosome 4 open reading frame 29##BC128143|C4orf29|80167|chromosome 4 open reading frame 29##BC111400|C4orf29|80167|chromosome 4 open reading frame 29##NM_001039717|C4orf29|80167|chromosome 4 open reading frame 29##BC058898|C4orf29|80167|chromosome 4 open reading frame 29##BC034253|C4orf29|80167|chromosome 4 open reading frame 29##AK310421|LARP1B|55132|La ribonucleoprotein domain family, member 1B##AK092764|LARP1B|55132|La ribonucleoprotein domain family, member 1B##BC002840|LARP1B|55132|La ribonucleoprotein domain family, member 1B##BC018794|LARP1B|55132|La ribonucleoprotein domain family, member 1B##BC110300|LARP1B|55132|La ribonucleoprotein domain family, member 1B##AL832170|LARP1B|55132|La ribonucleoprotein domain family, member 1B##NM_018078|LARP1B|55132|La ribonucleoprotein domain family, member 1B##NM_032239|LARP1B|55132|La ribonucleoprotein domain family, member 1B##NM_178043|LARP1B|55132|La ribonucleoprotein domain family, member 1B	0.869362	CTCF.p2:3:0.843
chr4	37979480	37979600	reg1024774.p1	5.740	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-523	+	AF095288 BC069114 BC069400 NM_006607	-17485	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-86751	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	686286	+	AF289565 TSC_hg19_v1_chr4_-_38666549	686949	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	805059	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr7	64079543	64079676	reg1023746.p1	5.740	+	TSC_hg19_v1_chr7_-_64023456 AK122937 BC030700 NM_001130022 NM_178558	-56130	-	TSC_hg19_v1_chr7_-_64023450 AK094476	-56162	-	AB529206 EU832109 EU832203 TSC_hg19_v1_chr7_-_64023424 AK131240	-56231	-	TSC_hg19_v1_chr7_+_64126510 AK303931 BC017809 NM_001013746 NM_016220 BC047243	46918	+	TSC_hg19_v1_chr7_+_64254799 NM_001160183 NM_006524 AK294302 AK298230 AK055644 BC141847 BC037426	175206	+	AK090648 AX746558 TSC_hg19_v1_chr7_+_64342925	263293	+	AK122937|ZNF680|340252|zinc finger protein 680##BC030700|ZNF680|340252|zinc finger protein 680##NM_001130022|ZNF680|340252|zinc finger protein 680##NM_178558|ZNF680|340252|zinc finger protein 680##EU832109|ZNF680|340252|zinc finger protein 680##EU832203|ZNF680|340252|zinc finger protein 680##AK131240|ZNF680|340252|zinc finger protein 680##AK303931|ZNF107|51427|zinc finger protein 107##BC017809|ZNF107|51427|zinc finger protein 107##NM_001013746|ZNF107|51427|zinc finger protein 107##NM_016220|ZNF107|51427|zinc finger protein 107##BC047243|ZNF107|51427|zinc finger protein 107##NM_001160183|ZNF138|7697|zinc finger protein 138##NM_006524|ZNF138|7697|zinc finger protein 138##AK294302|ZNF138|7697|zinc finger protein 138##AK298230|ZNF138|7697|zinc finger protein 138##AK055644|ZNF138|7697|zinc finger protein 138##BC141847|ZNF138|7697|zinc finger protein 138##BC037426|ZNF138|7697|zinc finger protein 138##AK090648|ZNF273|10793|zinc finger protein 273	0.98793	CTCF.p2:51:0.988
chr8	134468126	134468235	reg1025771.p2	5.740	+	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-158683	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-264850	+	NM_001045556 NM_001045557	-352871	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	115917	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1240614	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1256899	-	AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.995917	CTCF.p2:-11:0.996
chrX	30293772	30293897	reg1024732.p1	5.740	+	NM_177404 BC013772	-28538	+	AK314977 NM_002363 NM_177415 X82539	-31987	+	NM_002367 AK313769 BC032852 DQ891236 DQ894421 CR541779	-33680	+	HQ692832 AB464646 BC011564 NM_000475	33652	-	TSC_hg19_v1_chrX_-_30595884 AK021639 BC020611 NM_025159	302123	-	TSC_hg19_v1_chrX_+_30671493 BC042421 BC071595 NM_000167 NM_001128127 NM_001205019 NM_203391	377660	+	NM_177404|MAGEB1|4112|melanoma antigen family B, 1##BC013772|MAGEB1|4112|melanoma antigen family B, 1##AK314977|MAGEB1|4112|melanoma antigen family B, 1##NM_002363|MAGEB1|4112|melanoma antigen family B, 1##NM_177415|MAGEB1|4112|melanoma antigen family B, 1##X82539|MAGEB1|4112|melanoma antigen family B, 1##NM_002367|MAGEB4|4115|melanoma antigen family B, 4##AK313769|MAGEB4|4115|melanoma antigen family B, 4##BC032852|MAGEB4|4115|melanoma antigen family B, 4##DQ891236|MAGEB4|4115|melanoma antigen family B, 4##DQ894421|MAGEB4|4115|melanoma antigen family B, 4##CR541779|MAGEB4|4115|melanoma antigen family B, 4##HQ692832|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##BC011564|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_000475|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##AK021639|CXorf21|80231|chromosome X open reading frame 21##BC020611|CXorf21|80231|chromosome X open reading frame 21##NM_025159|CXorf21|80231|chromosome X open reading frame 21##BC042421|GK|2710|glycerol kinase##BC071595|GK|2710|glycerol kinase##NM_000167|GK|2710|glycerol kinase##NM_001128127|GK|2710|glycerol kinase##NM_001205019|GK|2710|glycerol kinase##NM_203391|GK|2710|glycerol kinase	0.043032	
chr1	197369307	197369428	reg1029135.p1	5.739	+	NM_001193640 NM_201253 AK299368 AK289733 AK307844 AB208923 AF154671 AY043324 AY043325 BC136271 BC143726 AJ748821	-131930	+	BC132818 BC136600 AK128549 AY163816 NM_194314	-199714	-	AF509326 AY099892 AY367065 AY971955 AY971956 AY971957 BC015396 TSC_hg19_v1_chr1_-_197115800 AK226178 AK125107 NM_001206846 NM_018136	-253673	-	AK000061 TSC_hg19_v1_chr1_-_197552357	182965	-	TSC_hg19_v1_chr1_-_197744376 BC022561	374967	-	TSC_hg19_v1_chr1_-_197744396 BC063456	375029	-	NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)##NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)##AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)##AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)##AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)##AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)##AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)##BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)##BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)##AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)##BC132818|ZBTB41|360023|zinc finger and BTB domain containing 41##BC136600|ZBTB41|360023|zinc finger and BTB domain containing 41##AK128549|ZBTB41|360023|zinc finger and BTB domain containing 41##AY163816|ZBTB41|360023|zinc finger and BTB domain containing 41##NM_194314|ZBTB41|360023|zinc finger and BTB domain containing 41##AF509326|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY099892|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY367065|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971955|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971956|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971957|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##BC015396|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK226178|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK125107|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_001206846|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_018136|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK000061|DENND1B|163486|DENN/MADD domain containing 1B##BC022561|DENND1B|163486|DENN/MADD domain containing 1B##BC063456|DENND1B|163486|DENN/MADD domain containing 1B	0.986684	CTCF.p2:1:0.987
chr16	57496430	57496610	reg1024707.p2	5.739	+	AK075438 NM_020312 TSC_hg19_v1_chr16_+_57481390 AK295793 BC064946 AK293585 BC029341 BC054340 AF161444 AK290627 AK303527 CU687976 EU832506 EU832587	-15144	+	BC036316 TSC_hg19_v1_chr16_-_57481298 AK074263 BC002568 AK292281 AL136613 BC071740 BC024196 AF248964 NM_020313 BC067303	-15166	-	BC069107 NM_002987 BC112066 BC112068	-57825	+	TSC_hg19_v1_chr16_+_57496563 NM_032940	38	+	TSC_hg19_v1_chr16_+_57496570 AK295582	51	+	TSC_hg19_v1_chr16_+_57496590 BC003159 AK300124 AK293112 BC028157 AJ224143 AJ224144 J05448 BC000409 AB464040 AF008443 CR542041 DQ891411 DQ894586 EU176305	85	+	AK075438|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_020312|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK295793|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC064946|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK293585|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC029341|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC054340|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AF161444|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK290627|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK303527|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832506|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832587|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC069107|CCL17|6361|chemokine (C-C motif) ligand 17##NM_002987|CCL17|6361|chemokine (C-C motif) ligand 17##BC112066|CCL17|6361|chemokine (C-C motif) ligand 17##BC112068|CCL17|6361|chemokine (C-C motif) ligand 17##NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##BC003159|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AK300124|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AK293112|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##BC028157|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AJ224143|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AJ224144|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##J05448|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##BC000409|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AF008443|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##CR542041|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##DQ891411|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##DQ894586|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##EU176305|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	0.03677	
chr17	65775243	65775332	reg1023581.p1	5.739	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	-61237	+	BC007905 NM_012417 NM_181671	-401364	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-401699	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	46415	+	AK293224 TSC_hg19_v1_chr17_+_65822221	46930	+	TSC_hg19_v1_chr17_+_65822242 AY282495	46962	+	BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor##AY282495|BPTF|2186|bromodomain PHD finger transcription factor	0.945621	CTCF.p2:-4:0.946
chr10	120018941	120019051	reg1023740.p1	5.738	+	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	-212566	+	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	-212952	-	TSC_hg19_v1_chr10_+_119302713 AB463605	-716253	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	82828	-	AK313269 AK290461 NM_004248	336162	-	CU691560 TSC_hg19_v1_chr10_-_120514298	495291	-	BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A##AK313269|PRLHR|2834|prolactin releasing hormone receptor##AK290461|PRLHR|2834|prolactin releasing hormone receptor##NM_004248|PRLHR|2834|prolactin releasing hormone receptor	0.634986	CTCF.p2:21:0.635
chr10	30673831	30673942	reg1028616.p1	5.738	+	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	-35653	-	TSC_hg19_v1_chr10_-_30348516 AK308850 NM_020848 BC071601	-325392	-	TSC_hg19_v1_chr10_-_30316350 BC047548	-357455	-	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	49053	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	49235	+	AF139543 BC066294 NM_183058	244749	-	AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##AK308850|KIAA1462|57608|KIAA1462##NM_020848|KIAA1462|57608|KIAA1462##BC071601|KIAA1462|57608|KIAA1462##BC047548|KIAA1462|57608|KIAA1462##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2	0.0	
chr21	35347741	35347922	reg1010494.p1	5.738	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-59739	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-157161	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-332976	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	98010	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	98098	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	388515	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.0	
chr20	39426228	39426338	reg1026013.p1	5.737	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-108406	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-1835294	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-1871215	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	231211	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	231381	+	TSC_hg19_v1_chr20_+_39765861 AB210028	339579	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.0	
chr7	154990695	154990839	reg1024833.p1	5.737	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	-128190	+	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	-195556	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	-196097	-	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	98755	+	AK291675 TSC_hg19_v1_chr7_+_155089667	98877	+	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	259997	+	BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##AK291675|INSIG1|3638|insulin induced gene 1##BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2	0.0	
chr11	30262831	30262956	reg1024325.p1	5.736	+	NM_000510 NM_001018080	-10331	+	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	-224362	-	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-2131040	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	81759	+	CU689190 NM_001584 U57911	339086	-	TSC_hg19_v1_chr11_-_30605748 AK309809	342855	-	NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46##NM_001584|MPPED2|744|metallophosphoesterase domain containing 2##U57911|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2	0.943251	CTCF.p2:-13:0.943
chr12	18403397	18403520	reg1024981.p1	5.736	+	AK026308 BC042888 NM_024730	-160376	-	AF258348 BC017777 AB044746 AK095595 AK308826 NM_001001395 NM_001243609	-1642417	-	AK308594 AK294909 NM_001243613	-1643447	-	NM_004570	11015	+	AF532185 NM_033123 AK314516 AY035866 AK292279	487495	-	BC016745 NM_033328 AB053259 AK058174 CU677705	487662	+	AK026308|RERGL|79785|RERG/RAS-like##BC042888|RERGL|79785|RERG/RAS-like##NM_024730|RERGL|79785|RERG/RAS-like##AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1##BC016745|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##NM_033328|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AB053259|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AK058174|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3	0.996703	CTCF.p2:-19:0.997
chr16	29796474	29796608	reg1023482.p2	5.736	+	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	-6955	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	-39240	-	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-106059	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	5510	+	TSC_hg19_v1_chr16_+_29802074 AK316389 BC028155 BT007259 DQ890771 DQ893652 DQ893932 DQ895829	5546	+	FJ532357 TSC_hg19_v1_chr16_+_29817510	20927	+	NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22##AK316389|KIF22|3835|kinesin family member 22##BC028155|KIF22|3835|kinesin family member 22##BT007259|KIF22|3835|kinesin family member 22##DQ890771|KIF22|3835|kinesin family member 22##DQ893652|KIF22|3835|kinesin family member 22##DQ893932|KIF22|3835|kinesin family member 22##DQ895829|KIF22|3835|kinesin family member 22##FJ532357|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)	0.0	
chr20	5626142	5626236	reg1022317.p1	5.736	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	-34602	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-331153	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-518494	+	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	104877	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	265937	+	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	304934	-	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	0.0	
chr3	195918943	195919061	reg1025830.p1	5.736	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-109986	-	TSC_hg19_v1_chr3_-_195808984 M11507	-110019	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-110041	-	BC034801 BC022078 NM_001039617 AK122907	19279	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	24392	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	95533	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr1	110173099	110173175	reg1023104.p1	5.735	+	NM_203404 S47833	-5089	+	TSC_hg19_v1_chr1_+_110163724 AK302939	-9416	+	NM_004037 U16268	-9862	+	AK291880 NM_000850 NM_147148 TSC_hg19_v1_chr1_+_110198723	25573	+	TSC_hg19_v1_chr1_+_110198727 DQ062813 AK311000 BC015513 M99422 M96234 BC108729	25615	+	M99421 TSC_hg19_v1_chr1_+_110198960 AB590400 DQ890658 DQ890659 DQ893839 BT019947 CR541869 CU677329	25806	+	NM_203404|AMPD2|271|adenosine monophosphate deaminase 2##S47833|AMPD2|271|adenosine monophosphate deaminase 2##AK302939|AMPD2|271|adenosine monophosphate deaminase 2##NM_004037|AMPD2|271|adenosine monophosphate deaminase 2##U16268|AMPD2|271|adenosine monophosphate deaminase 2##AK291880|GSTM4|2948|glutathione S-transferase mu 4##NM_000850|GSTM4|2948|glutathione S-transferase mu 4##NM_147148|GSTM4|2948|glutathione S-transferase mu 4##DQ062813|GSTM4|2948|glutathione S-transferase mu 4##BC015513|GSTM4|2948|glutathione S-transferase mu 4##M99422|GSTM4|2948|glutathione S-transferase mu 4##M96234|GSTM4|2948|glutathione S-transferase mu 4##BC108729|GSTM4|2948|glutathione S-transferase mu 4##M99421|GSTM4|2948|glutathione S-transferase mu 4##DQ890658|GSTM4|2948|glutathione S-transferase mu 4##DQ890659|GSTM4|2948|glutathione S-transferase mu 4##DQ893839|GSTM4|2948|glutathione S-transferase mu 4##BT019947|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##CR541869|GSTM4|2948|glutathione S-transferase mu 4	0.999776	CTCF.p2:1:1.000
chr12	94161106	94161227	reg1022474.p1	5.735	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-89983	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-195565	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-196346	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	381338	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	692365	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	692476	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.0	
chr16	2771357	2771444	reg1025097.p2	5.735	+	BC036912 NM_031948	-849	-	TSC_hg19_v1_chr16_+_2732528 BC007314	-38809	+	TSC_hg19_v1_chr16_+_2732524 NM_018992 AK000047	-38901	+	TSC_hg19_v1_chr16_+_2802357 NM_016333	30977	+	TSC_hg19_v1_chr16_+_2802630 BC070050	31218	+	TSC_hg19_v1_chr16_+_2802638 BC020639	31236	+	BC036912|PRSS27|83886|protease, serine 27##NM_031948|PRSS27|83886|protease, serine 27##BC007314|KCTD5|54442|potassium channel tetramerisation domain containing 5##NM_018992|KCTD5|54442|potassium channel tetramerisation domain containing 5##AK000047|KCTD5|54442|potassium channel tetramerisation domain containing 5##NM_016333|SRRM2|23524|serine/arginine repetitive matrix 2##BC070050|SRRM2|23524|serine/arginine repetitive matrix 2##BC020639|SRRM2|23524|serine/arginine repetitive matrix 2	0.99963	CTCF.p2:-21:1.000
chr4	94709967	94710120	reg1024910.p1	5.735	+	AB209318 NM_001510 AK308611	-1484451	+	BC051694 NM_207491	-3553862	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-3661325	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	40018	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	418768	+	TSC_hg19_v1_chr4_+_95129015 NM_001128429 NM_020159 BC045534 AY008271 BC041800	419071	+	AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.154261	
chr6	140248566	140248683	reg1022797.p2	5.735	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-552840	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-552863	-	NM_001168389 NM_001168388	-553201	-	BC095542 GU727635 M73482 NM_002511	2161240	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	2219766	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	2219782	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.0	
chr8	136935429	136935610	reg1025276.p2	5.735	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-465318	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-465861	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1210245	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2573587	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2990725	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3779763	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.0	
chr8	57160932	57161091	reg1024576.p1	5.735	+	TSC_hg19_v1_chr8_+_57124347 AK095922 AK098285 AK290088 AY070434 AK225982 BC002546	-36672	+	NM_001011667 NM_001011668 NM_001011669 NM_001011670 NM_001011671 NM_024300 TSC_hg19_v1_chr8_+_57124314	-36697	+	AK296933 AK313663 NM_001114634 NM_001114635 NM_002655 TSC_hg19_v1_chr8_-_57123860	-37150	-	BC064525 AK057667 TSC_hg19_v1_chr8_-_57232687 BC037219	71659	-	TSC_hg19_v1_chr8_-_57232700 AY444559 AK294634	71707	-	AB083038 NM_138969 AK095159	72276	-	AK095922|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##AK098285|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##AK290088|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##AY070434|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##AK225982|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##BC002546|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011667|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011668|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011669|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011670|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_001011671|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##NM_024300|CHCHD7|79145|coiled-coil-helix-coiled-coil-helix domain containing 7##AK296933|PLAG1|5324|pleiomorphic adenoma gene 1##AK313663|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001114634|PLAG1|5324|pleiomorphic adenoma gene 1##NM_001114635|PLAG1|5324|pleiomorphic adenoma gene 1##NM_002655|PLAG1|5324|pleiomorphic adenoma gene 1##BC064525|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##AK057667|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##BC037219|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##AY444559|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##AK294634|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##AB083038|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##NM_138969|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5##AK095159|SDR16C5|195814|short chain dehydrogenase/reductase family 16C, member 5	0.919934	CTCF.p2:-3:0.920
chrX	133895955	133896097	reg1024648.p1	5.735	+	BC022335 AF234654 BC066327 AK075086 NM_021796	-103522	-	TSC_hg19_v1_chrX_+_133594303 BC000578 BT019350 CR407645 DQ895107 DQ895109 EU176316 EU176655 L29382 L29383	-301707	+	TSC_hg19_v1_chrX_+_133594225 M31642	-301770	+	AB541014 AB541015 AB528130 AM393279 CU676388 AK125991 TSC_hg19_v1_chrX_-_133930299 AK292517 AL832218 NM_001170756 NM_145284	34283	-	AK307219 NM_001170780	34416	+	TSC_hg19_v1_chrX_-_133931236 BC019221 NM_001166599 AK124650 AK297720 NM_001166600 NM_001170757	35177	-	BC022335|PLAC1|10761|placenta-specific 1##AF234654|PLAC1|10761|placenta-specific 1##BC066327|PLAC1|10761|placenta-specific 1##AK075086|PLAC1|10761|placenta-specific 1##NM_021796|PLAC1|10761|placenta-specific 1##BC000578|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##BT019350|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##CR407645|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895107|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895109|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176316|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176655|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29382|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29383|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##M31642|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##AB541015|FAM122B|159090|family with sequence similarity 122B##AM393279|FAM122B|159090|family with sequence similarity 122B##AK125991|FAM122B|159090|family with sequence similarity 122B##AK292517|FAM122B|159090|family with sequence similarity 122B##AL832218|FAM122B|159090|family with sequence similarity 122B##NM_001170756|FAM122B|159090|family with sequence similarity 122B##NM_145284|FAM122B|159090|family with sequence similarity 122B##AK307219|FAM122C|159091|family with sequence similarity 122C##NM_001170780|FAM122C|159091|family with sequence similarity 122C##BC019221|FAM122B|159090|family with sequence similarity 122B##NM_001166599|FAM122B|159090|family with sequence similarity 122B##AK124650|FAM122B|159090|family with sequence similarity 122B##AK297720|FAM122B|159090|family with sequence similarity 122B##NM_001166600|FAM122B|159090|family with sequence similarity 122B##NM_001170757|FAM122B|159090|family with sequence similarity 122B	0.010386	
chr15	20775708	20775841	reg1029496.p1	5.734	+	NM_001145004	-28661	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-64337	-	None	None	None	NM_207355 BC066981	296204	-	NM_207355 BC066981	1307364	-	BC136985 NM_001004719	1592703	+	NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2	0.864445	CTCF.p2:-1:0.836
chr16	57336727	57336832	reg1022164.p1	5.734	+	TSC_hg19_v1_chr16_-_57318585 AK130584 AK313910 NM_015993	-18200	-	CU678172 BC002760 TSC_hg19_v1_chr16_-_57318556 AK289599 AF137386	-18268	-	TSC_hg19_v1_chr16_+_57279154 AK075050 NM_012106 BC003087 AK311018 AK298758	-57646	+	NM_002990 AK311970 U83171 U83239 BC027952 CU693342 AB590299 DQ890922 DQ893311 DQ894072 DQ896625 EU176526	55931	+	AK222692 TSC_hg19_v1_chr16_+_57406382	69606	+	TSC_hg19_v1_chr16_+_57406401 AK223351 AK313806 U84487 U91835 BC001163 BC016164 NM_002996 AB590256 DQ890704 DQ891871 DQ893888 DQ895059 CU674588 CR457426	69660	+	AK130584|PLLP|51090|plasmolipin##AK313910|PLLP|51090|plasmolipin##NM_015993|PLLP|51090|plasmolipin##BC002760|PLLP|51090|plasmolipin##AK289599|PLLP|51090|plasmolipin##AF137386|PLLP|51090|plasmolipin##AK075050|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##NM_012106|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##BC003087|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##AK311018|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##AK298758|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##NM_002990|CCL22|6367|chemokine (C-C motif) ligand 22##AK311970|CCL22|6367|chemokine (C-C motif) ligand 22##U83171|CCL22|6367|chemokine (C-C motif) ligand 22##U83239|CCL22|6367|chemokine (C-C motif) ligand 22##BC027952|CCL22|6367|chemokine (C-C motif) ligand 22##DQ890922|CCL22|6367|chemokine (C-C motif) ligand 22##DQ893311|CCL22|6367|chemokine (C-C motif) ligand 22##DQ894072|CCL22|6367|chemokine (C-C motif) ligand 22##DQ896625|CCL22|6367|chemokine (C-C motif) ligand 22##EU176526|CCL22|6367|chemokine (C-C motif) ligand 22##AK222692|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK223351|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK313806|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U84487|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U91835|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC001163|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC016164|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002996|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ890704|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ891871|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ893888|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ895059|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##CR457426|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1	0.136722	
chr2	65657929	65658072	reg1025552.p2	5.734	+	TSC_hg19_v1_chr2_-_65593867 NM_001128210	-64102	-	TSC_hg19_v1_chr2_-_65593766 AK299079	-64227	-	NM_001005386 NM_005722 TSC_hg19_v1_chr2_+_65454944 AK295157 AK301634 BC014546 BX649080 AF006082 AK315205 AB462954 EU831978 EU832071	-203065	+	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	1212	-	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	1676	-	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	5837	+	NM_001128210|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK299079|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_001005386|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##NM_005722|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK295157|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK301634|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BC014546|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BX649080|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AF006082|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK315205|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU831978|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU832071|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein	0.0	
chr5	78551920	78552047	reg1023795.p2	5.734	+	TSC_hg19_v1_chr5_+_78532339 AB590691	-19579	+	TSC_hg19_v1_chr5_+_78531933 NM_152405	-20092	+	NM_001713 AK298308 AK303780 AK315224 BC012616 U50929 AB590690	-144328	+	BC047438 NM_004272	257695	-	NM_001114393 NM_001114394 NM_173797 TSC_hg19_v1_chr5_+_78908290 AL833136 BC047581	356283	+	TSC_hg19_v1_chr5_+_78908296 BC026061	356332	+	NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor##NM_001713|BHMT|635|betaine--homocysteine S-methyltransferase##AK298308|BHMT|635|betaine--homocysteine S-methyltransferase##AK303780|BHMT|635|betaine--homocysteine S-methyltransferase##AK315224|BHMT|635|betaine--homocysteine S-methyltransferase##BC012616|BHMT|635|betaine--homocysteine S-methyltransferase##U50929|BHMT|635|betaine--homocysteine S-methyltransferase##BC047438|HOMER1|9456|homer homolog 1 (Drosophila)##NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)##NM_001114393|PAPD4|167153|PAP associated domain containing 4##NM_001114394|PAPD4|167153|PAP associated domain containing 4##NM_173797|PAPD4|167153|PAP associated domain containing 4##AL833136|PAPD4|167153|PAP associated domain containing 4##BC047581|PAPD4|167153|PAP associated domain containing 4##BC026061|PAPD4|167153|PAP associated domain containing 4	0.286032	CTCF.p2:-16:0.286
chr12	26998129	26998228	reg1024951.p2	5.733	+	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	-12098	-	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-649593	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-649887	+	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	92731	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	93052	-	NM_001171887 NM_001171888 NM_015633 AK001534 TSC_hg19_v1_chr12_+_27091402 BC032143 AF161472	93197	+	AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_001171887|FGFR1OP2|26127|FGFR1 oncogene partner 2##NM_001171888|FGFR1OP2|26127|FGFR1 oncogene partner 2##NM_015633|FGFR1OP2|26127|FGFR1 oncogene partner 2##AK001534|FGFR1OP2|26127|FGFR1 oncogene partner 2##BC032143|FGFR1OP2|26127|FGFR1 oncogene partner 2##AF161472|FGFR1OP2|26127|FGFR1 oncogene partner 2	0.997147	CTCF.p2:7:0.997
chr14	94402771	94402863	reg1024511.p1	5.733	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	-9109	+	NM_001207071 NM_138344 AK093387 AX748092	-17569	+	AY225516 AY225517 NM_178013	-148052	-	AB056723 NM_016150	20949	-	AK303686 TSC_hg19_v1_chr14_-_94442905	40091	-	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	40259	-	NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2	0.992444	CTCF.p2:-16:0.992
chr9	43653874	43653962	reg1025689.p2	5.733	+	NM_001145196	-23189	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-520431	-	NM_001099279 NM_199244	-936685	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	30925	+	TSC_hg19_v1_chr9_+_45441926 BC006438	1788008	+	BC040528 NM_001113541 NM_015667	21855691	-	NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.997456	CTCF.p2:-5:0.997
chr12	117047672	117047779	reg1024906.p2	5.732	+	NM_001085481	-50540	+	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	-76496	+	TSC_hg19_v1_chr12_-_116715263 AY338463	-332565	-	TSC_hg19_v1_chr12_-_117175822 AK309652 BC019843 AK025068 NM_024738	128013	-	TSC_hg19_v1_chr12_-_117175868 AK222983 AK298857	128144	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	128394	+	NM_001085481|MAP1LC3B2|643246|microtubule-associated protein 1 light chain 3 beta 2##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173##AY338463|MED13L|23389|mediator complex subunit 13-like##AK309652|C12orf49|79794|chromosome 12 open reading frame 49##BC019843|C12orf49|79794|chromosome 12 open reading frame 49##AK025068|C12orf49|79794|chromosome 12 open reading frame 49##NM_024738|C12orf49|79794|chromosome 12 open reading frame 49##AK222983|C12orf49|79794|chromosome 12 open reading frame 49##AK298857|C12orf49|79794|chromosome 12 open reading frame 49##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2	0.446768	CTCF.p2:12:0.447
chr16	1299624	1299723	reg1022035.p1	5.732	+	NM_003294 BC074974 BC074975 BC029356	-8982	+	BC065923 AK308208 BC029356 NM_024164 BC074974	-19495	-	NM_012467 TSC_hg19_v1_chr16_-_1275269	-24412	-	NM_012217 BC069143	6603	+	NM_194260 NM_194261	59480	+	TSC_hg19_v1_chr16_+_1359631 NM_003345 NM_194259	59955	+	NM_003294|TPSAB1|7177|tryptase alpha/beta 1##BC074974|TPSAB1|7177|tryptase alpha/beta 1##BC074975|TPSAB1|7177|tryptase alpha/beta 1##BC029356|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##BC065923|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##AK308208|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##BC029356|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##NM_024164|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##BC074974|TPSAB1|7177|tryptase alpha/beta 1##NM_012467|TPSG1|25823|tryptase gamma 1##NM_012217|TPSD1|23430|tryptase delta 1##BC069143|TPSD1|23430|tryptase delta 1##NM_194260|UBE2I|7329|ubiquitin-conjugating enzyme E2I##NM_194261|UBE2I|7329|ubiquitin-conjugating enzyme E2I##NM_003345|UBE2I|7329|ubiquitin-conjugating enzyme E2I##NM_194259|UBE2I|7329|ubiquitin-conjugating enzyme E2I	0.846362	CTCF.p2:-31:0.846
chr16	62903797	62903977	reg1018318.p1	5.732	+	AK124734 NM_001796	-833149	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-4135690	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-4185231	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	2252015	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	2252081	-	TSC_hg19_v1_chr16_-_65155987 AK297377	2252107	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.0	
chr6	43576133	43576313	reg1025740.p2	5.732	+	AK316151 TSC_hg19_v1_chr6_+_43543921 AB024313 AF158185 BC015742	-32246	+	NM_006502 AK023893 AK307660 AK294430 TSC_hg19_v1_chr6_+_43543902	-32328	+	TSC_hg19_v1_chr6_-_43543767 AK056619 AK291452 BC062635 NM_020750	-32434	-	AK000430 TSC_hg19_v1_chr6_-_43595067	18834	-	TSC_hg19_v1_chr6_-_43595101 AK290267	18882	-	AL834331 AF168990 CU687988 TSC_hg19_v1_chr6_-_43596918	20618	-	AK316151|POLH|5429|polymerase (DNA directed), eta##AB024313|POLH|5429|polymerase (DNA directed), eta##AF158185|POLH|5429|polymerase (DNA directed), eta##BC015742|POLH|5429|polymerase (DNA directed), eta##NM_006502|POLH|5429|polymerase (DNA directed), eta##AK023893|POLH|5429|polymerase (DNA directed), eta##AK307660|POLH|5429|polymerase (DNA directed), eta##AK294430|POLH|5429|polymerase (DNA directed), eta##AK056619|XPO5|57510|exportin 5##AK291452|XPO5|57510|exportin 5##BC062635|XPO5|57510|exportin 5##NM_020750|XPO5|57510|exportin 5##AK000430|GTPBP2|54676|GTP binding protein 2##AK290267|GTPBP2|54676|GTP binding protein 2##AL834331|GTPBP2|54676|GTP binding protein 2##AF168990|GTPBP2|54676|GTP binding protein 2	0.991096	CTCF.p2:-10:0.991
chr9	107951174	107951282	reg1024948.p1	5.732	+	NM_005502 TSC_hg19_v1_chr9_-_107690527	-260699	-	AK024328 TSC_hg19_v1_chr9_-_107690437 AF258627	-260748	-	BC146856 TSC_hg19_v1_chr9_-_107690419 AF285167 BC034824 BC141816 BC142693 AK022254	-260844	-	TSC_hg19_v1_chr9_+_108006931 NM_080546	55685	+	TSC_hg19_v1_chr9_+_108006937 AJ272365	55723	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	55839	+	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##NM_080546|SLC44A1|23446|solute carrier family 44, member 1##AJ272365|SLC44A1|23446|solute carrier family 44, member 1##AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1	0.952037	CTCF.p2:-33:0.952
chr1	201847083	201847196	reg1023060.p1	5.731	+	TSC_hg19_v1_chr1_+_201798330 AF410465	-48802	+	TSC_hg19_v1_chr1_+_201798284 NM_018085	-48849	+	AB033039 TSC_hg19_v1_chr1_+_201751812	-95354	+	AK311191 TSC_hg19_v1_chr1_+_201857806 NM_198149 AK316312 BC111855	10663	+	TSC_hg19_v1_chr1_+_201858006 BC009558 AY358589 AK294106 BC066977 BC104444 BC104445 EU832101 EU832195 BC061908	10952	+	CU687334 AK126474 BC001755 X54162 AK304700 AK304852 AK311740 BC080187 TSC_hg19_v1_chr1_-_201915677 AK295824	68434	-	AF410465|IPO9|55705|importin 9##NM_018085|IPO9|55705|importin 9##AB033039|NAV1|89796|neuron navigator 1##AK311191|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##NM_198149|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##AK316312|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC111855|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC009558|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##AY358589|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##AK294106|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC066977|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC104444|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC104445|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##EU832101|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##EU832195|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC061908|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##AK126474|LMOD1|25802|leiomodin 1 (smooth muscle)##BC001755|LMOD1|25802|leiomodin 1 (smooth muscle)##X54162|LMOD1|25802|leiomodin 1 (smooth muscle)##AK304852|LMOD1|25802|leiomodin 1 (smooth muscle)##BC080187|LMOD1|25802|leiomodin 1 (smooth muscle)##AK295824|LMOD1|25802|leiomodin 1 (smooth muscle)	0.089407	
chr13	99134857	99135038	reg1026068.p2	5.731	+	TSC_hg19_v1_chr13_+_99058147 AF339817	-76741	+	AB464689 EU446571 AF539427 BC025388 BC017585 NM_178861	-305442	-	TSC_hg19_v1_chr13_+_98795717 AB008430 BC065020	-339229	+	AF083420 NM_003576	39348	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	94107	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	94175	-	EU446571|RNF113B|140432|ring finger protein 113B##AF539427|RNF113B|140432|ring finger protein 113B##BC025388|RNF113B|140432|ring finger protein 113B##BC017585|RNF113B|140432|ring finger protein 113B##NM_178861|RNF113B|140432|ring finger protein 113B##AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##AF083420|STK24|8428|serine/threonine kinase 24##NM_003576|STK24|8428|serine/threonine kinase 24##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24	0.0	
chr17	38600061	38600188	reg1025577.p1	5.731	+	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-305	+	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	-26000	-	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	-79178	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	57722	-	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	121594	-	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	203946	-	NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.282714	CTCF.p2:-15:0.283
chr18	13567006	13567187	reg1021292.p1	5.731	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-348311	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-575751	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-619032	+	NM_001003674 NM_001003675	44568	+	AF009426 AF009427 NM_004338 NM_181483	53770	+	TSC_hg19_v1_chr18_-_13726549 AK055618	159410	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.0	
chr3	185979580	185979703	reg1024470.p1	5.731	+	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	-152785	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	-153295	-	TSC_hg19_v1_chr3_-_185655843 AK315632 NM_001243879 NM_004593	-323763	-	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	100293	-	CU686840 AF161703 BC069478 AK314172 NM_017541	282499	-	TSC_hg19_v1_chr3_-_186285118 AK001422 BC025748	305467	-	BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AF161703|CRYGS|1427|crystallin, gamma S##BC069478|CRYGS|1427|crystallin, gamma S##AK314172|CRYGS|1427|crystallin, gamma S##NM_017541|CRYGS|1427|crystallin, gamma S##AK001422|TBCCD1|55171|TBCC domain containing 1##BC025748|TBCCD1|55171|TBCC domain containing 1	0.562272	CTCF.p2:-107:0.469
chr11	12143769	12143885	reg1029016.p1	5.730	+	TSC_hg19_v1_chr11_+_12132122 BC044577 NM_014632 BC015755 AB018293	-11697	+	TSC_hg19_v1_chr11_-_12030884 AB057591 NM_013253	-112925	-	TSC_hg19_v1_chr11_-_12030877 AY358378	-112969	-	AK123671 NM_032867	164619	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	255282	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	552136	+	BC044577|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_014632|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##BC015755|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB018293|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB057591|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_013253|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AY358378|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)	0.018387	
chr1	20688390	20688570	reg1023801.p2	5.730	+	NM_001039500 AK125833	-71060	+	BC047428 NM_152376 BX648631 AK058158 TSC_hg19_v1_chr1_+_20512591	-175896	+	NM_001105572	-186794	-	AY204901 TSC_hg19_v1_chr1_-_20812323	123818	-	NM_018584 TSC_hg19_v1_chr1_-_20812743	124301	-	EU935008 AB528298 AM393331 AM393690 TSC_hg19_v1_chr1_-_20834605 BC014010 BC010101	146080	-	NM_001039500|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AK125833|VWA5B1|127731|von Willebrand factor A domain containing 5B1##BC047428|UBXN10|127733|UBX domain protein 10##NM_152376|UBXN10|127733|UBX domain protein 10##BX648631|UBXN10|127733|UBX domain protein 10##AK058158|UBXN10|127733|UBX domain protein 10##NM_001105572|PLA2G2C|391013|phospholipase A2, group IIC##AY204901|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##NM_018584|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##EU935008|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AM393331|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AM393690|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC014010|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##BC010101|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1	0.978501	CTCF.p2:-2:0.979
chr2	135334179	135334315	reg1024516.p1	5.730	+	NM_002410 D17716 AF113921	-322362	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-1008209	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-1154893	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	142309	-	AK125008 NM_138326 BC016018 BC107420 AB071418	261971	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	342150	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.370093	CTCF.p2:1:0.370
chr7	6677463	6677559	reg1023906.p1	5.730	+	NM_017560	-21985	+	TSC_hg19_v1_chr7_+_6629662 BC001076 BC005121 AK056149 NM_024067	-47725	+	TSC_hg19_v1_chr7_+_6617111 AK223532 NM_001134387 NM_001134388 NM_001134389 NM_018106 AK001341 AK308971 AL136674 BC001239 AY359090	-60393	+	TSC_hg19_v1_chr7_-_6746579 BC051892 BC154414 AB021643 NM_006956 NM_016265 AK293925	69069	-	AK092111 TSC_hg19_v1_chr7_+_6746715	69198	+	TSC_hg19_v1_chr7_+_6769414 AK296451	91904	+	NM_017560|ZNF853|54753|zinc finger protein 853##BC001076|C7orf26|79034|chromosome 7 open reading frame 26##BC005121|C7orf26|79034|chromosome 7 open reading frame 26##AK056149|C7orf26|79034|chromosome 7 open reading frame 26##NM_024067|C7orf26|79034|chromosome 7 open reading frame 26##AK223532|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134387|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134388|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_001134389|ZDHHC4|55146|zinc finger, DHHC-type containing 4##NM_018106|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK001341|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AK308971|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AL136674|ZDHHC4|55146|zinc finger, DHHC-type containing 4##BC001239|ZDHHC4|55146|zinc finger, DHHC-type containing 4##AY359090|ZDHHC4|55146|zinc finger, DHHC-type containing 4##BC051892|ZNF12|7559|zinc finger protein 12##BC154414|ZNF12|7559|zinc finger protein 12##AB021643|ZNF12|7559|zinc finger protein 12##NM_006956|ZNF12|7559|zinc finger protein 12##NM_016265|ZNF12|7559|zinc finger protein 12##AK293925|ZNF12|7559|zinc finger protein 12	0.137282	
chrX	18950226	18950357	reg1023955.p1	5.730	+	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	-241247	+	AB464151 AF014459 DQ426892 NM_000330	-260087	-	BC036091 NM_001037343	-489948	+	TSC_hg19_v1_chrX_-_19002476 NM_000292	52171	-	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	190376	-	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	411791	+	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1##BC036091|CDKL5|6792|cyclin-dependent kinase-like 5##NM_001037343|CDKL5|6792|cyclin-dependent kinase-like 5##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1	0.999598	CTCF.p2:15:1.000
chr7	676206	676317	reg1024600.p1	5.729	+	TSC_hg19_v1_chr7_-_559484 NM_002607 NM_033023	-116776	-	X03795 X06374 TSC_hg19_v1_chr7_-_559093	-117197	-	TSC_hg19_v1_chr7_-_558849 AK292217	-117427	-	AK289464 TSC_hg19_v1_chr7_-_752095 AK297337	75837	-	BC036828 TSC_hg19_v1_chr7_-_752142 AK315951 NM_002735	75886	-	NM_001164762	76315	-	NM_002607|PDGFA|5154|platelet-derived growth factor alpha polypeptide##NM_033023|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X03795|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X06374|PDGFA|5154|platelet-derived growth factor alpha polypeptide##AK292217|PDGFA|5154|platelet-derived growth factor alpha polypeptide##AK289464|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK297337|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##BC036828|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK315951|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_002735|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164762|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta	0.856273	CTCF.p2:6:0.856
chr9	130497798	130497924	reg1002728.p4	5.729	+	TSC_hg19_v1_chr9_-_130497669 NM_001085347 NM_001134430 NM_001134431 NM_001252018 NM_001252021 NM_001252023 NM_130459	-201	-	TSC_hg19_v1_chr9_-_130497605 BC080527 AK027677 BC100907 BC100908 BC100909 BC100910 AK075520 AK055034 AK092388 AX747514 AY358180 BC062340	-283	-	AK294862 BC031281 AK057342 AK302422 AK302737 NM_144965	-19512	+	AK291393 TSC_hg19_v1_chr9_-_130517562 NM_001142534 AK056068 NM_001142533	19706	-	AK311510 NM_001142532 AK294386 NM_001142531	26846	-	CU693348 BC027962 AY358440 AF124251 AK292041 BX647905 NM_001252334 NM_005489	35717	-	NM_001085347|TOR2A|27433|torsin family 2, member A##NM_001134430|TOR2A|27433|torsin family 2, member A##NM_001134431|TOR2A|27433|torsin family 2, member A##NM_001252018|TOR2A|27433|torsin family 2, member A##NM_001252021|TOR2A|27433|torsin family 2, member A##NM_001252023|TOR2A|27433|torsin family 2, member A##NM_130459|TOR2A|27433|torsin family 2, member A##BC080527|TOR2A|27433|torsin family 2, member A##AK027677|TOR2A|27433|torsin family 2, member A##BC100907|TOR2A|27433|torsin family 2, member A##BC100908|TOR2A|27433|torsin family 2, member A##BC100909|TOR2A|27433|torsin family 2, member A##BC100910|TOR2A|27433|torsin family 2, member A##AK075520|TOR2A|27433|torsin family 2, member A##AK055034|TOR2A|27433|torsin family 2, member A##AK092388|TOR2A|27433|torsin family 2, member A##AY358180|TOR2A|27433|torsin family 2, member A##BC062340|TOR2A|27433|torsin family 2, member A##AK294862|TTC16|158248|tetratricopeptide repeat domain 16##BC031281|TTC16|158248|tetratricopeptide repeat domain 16##AK057342|TTC16|158248|tetratricopeptide repeat domain 16##AK302422|TTC16|158248|tetratricopeptide repeat domain 16##AK302737|TTC16|158248|tetratricopeptide repeat domain 16##NM_144965|TTC16|158248|tetratricopeptide repeat domain 16##AK291393|SH2D3C|10044|SH2 domain containing 3C##NM_001142534|SH2D3C|10044|SH2 domain containing 3C##AK056068|SH2D3C|10044|SH2 domain containing 3C##NM_001142533|SH2D3C|10044|SH2 domain containing 3C##AK311510|SH2D3C|10044|SH2 domain containing 3C##NM_001142532|SH2D3C|10044|SH2 domain containing 3C##AK294386|SH2D3C|10044|SH2 domain containing 3C##NM_001142531|SH2D3C|10044|SH2 domain containing 3C##BC027962|SH2D3C|10044|SH2 domain containing 3C##AY358440|SH2D3C|10044|SH2 domain containing 3C##AF124251|SH2D3C|10044|SH2 domain containing 3C##AK292041|SH2D3C|10044|SH2 domain containing 3C##BX647905|SH2D3C|10044|SH2 domain containing 3C##NM_001252334|SH2D3C|10044|SH2 domain containing 3C##NM_005489|SH2D3C|10044|SH2 domain containing 3C	0.0	
chr9	91933858	91933968	reg1024392.p1	5.729	+	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-495	+	TSC_hg19_v1_chr9_+_91926112 NM_001827 X54942 BC006458 AB527990 BT006630 CR407630 CR542118	-7755	+	BC026314 NM_016848 TSC_hg19_v1_chr9_-_91793734	-140203	-	BC054500 NM_001142287 NM_006378	160697	-	BX648216 TSC_hg19_v1_chr9_-_92113005	179094	-	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	286068	+	AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2##X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma	0.987357	CTCF.p2:13:0.987
chr4	54467787	54467902	reg1020241.p1	5.728	+	AK056823 NM_001126328 TSC_hg19_v1_chr4_-_54457761	-10100	-	BC022983 TSC_hg19_v1_chr4_-_54457654	-10201	-	TSC_hg19_v1_chr4_-_54424402 NM_032622	-43426	-	AB463552 DQ890711 DQ893893 TSC_hg19_v1_chr4_-_54930576	462682	-	TSC_hg19_v1_chr4_-_54930764 AF159423 BC034691	462891	-	TSC_hg19_v1_chr4_-_54930773 AK312427 NM_012110	462953	-	AK056823|LNX1|84708|ligand of numb-protein X 1##NM_001126328|LNX1|84708|ligand of numb-protein X 1##BC022983|LNX1|84708|ligand of numb-protein X 1##NM_032622|LNX1|84708|ligand of numb-protein X 1##DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2##DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2##AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2##BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2##AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	0.987479	CTCF.p2:15:0.987
chrX	99891851	99891956	reg1024235.p2	5.728	+	BT006977 CR457115 AB527646 DQ890668 DQ893849 TSC_hg19_v1_chrX_-_99891804 AF053453 AK299176 AF133426 AK309581 AY358825 AB097016 AF043906 U84895 BC012389 NM_003270 AK075072 AB209876 AK315773 AK300852	-135	-	NM_022144 AF191770 BC034030 AF291656 AF234259 AY358706 AB055421 AB590911 CU689814	-52002	+	EF676096 NM_001105243 NM_001184880 NM_020766 TSC_hg19_v1_chrX_-_99665272	-226630	-	NM_014467 TSC_hg19_v1_chrX_+_99899195 AK075462 AF060567 AF393649	7329	+	BC020733 TSC_hg19_v1_chrX_+_99899388	7492	+	AK313086 BC014913 TSC_hg19_v1_chrX_-_99986519 NM_001174068 NM_080737	94608	-	BT006977|TSPAN6|7105|tetraspanin 6##CR457115|TSPAN6|7105|tetraspanin 6##DQ890668|TSPAN6|7105|tetraspanin 6##DQ893849|TSPAN6|7105|tetraspanin 6##AF053453|TSPAN6|7105|tetraspanin 6##AK299176|TSPAN6|7105|tetraspanin 6##AF133426|TSPAN6|7105|tetraspanin 6##AK309581|TSPAN6|7105|tetraspanin 6##AY358825|TSPAN6|7105|tetraspanin 6##AB097016|TSPAN6|7105|tetraspanin 6##AF043906|TSPAN6|7105|tetraspanin 6##U84895|TSPAN6|7105|tetraspanin 6##BC012389|TSPAN6|7105|tetraspanin 6##NM_003270|TSPAN6|7105|tetraspanin 6##AK075072|TSPAN6|7105|tetraspanin 6##AB209876|TSPAN6|7105|tetraspanin 6##AK315773|TSPAN6|7105|tetraspanin 6##AK300852|TSPAN6|7105|tetraspanin 6##NM_022144|TNMD|64102|tenomodulin##AF191770|TNMD|64102|tenomodulin##BC034030|TNMD|64102|tenomodulin##AF291656|TNMD|64102|tenomodulin##AF234259|TNMD|64102|tenomodulin##AY358706|TNMD|64102|tenomodulin##AB055421|TNMD|64102|tenomodulin##EF676096|PCDH19|57526|protocadherin 19##NM_001105243|PCDH19|57526|protocadherin 19##NM_001184880|PCDH19|57526|protocadherin 19##NM_020766|PCDH19|57526|protocadherin 19##NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2##BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AK313086|SYTL4|94121|synaptotagmin-like 4##BC014913|SYTL4|94121|synaptotagmin-like 4##NM_001174068|SYTL4|94121|synaptotagmin-like 4##NM_080737|SYTL4|94121|synaptotagmin-like 4	0.629726	CTCF.p2:-12:0.618
chr10	125974701	125974843	reg1020324.p2	5.727	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	-121619	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-122873	-	BC137492 BC146862 AY358565 NM_198148	-323276	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	132701	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	132746	-	NM_001146340 TSC_hg19_v1_chr10_-_126138606	163805	-	BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##NM_001146340|NKX1-2|390010|NK1 homeobox 2	0.0	
chr16	14379061	14379199	reg1023723.p1	5.727	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-84932	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-98612	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-214044	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	344898	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	345003	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	347609	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.0	
chr3	42158824	42158901	reg1022105.p1	5.727	+	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	-26029	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	-155303	-	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	-917838	+	TSC_hg19_v1_chr3_+_42190749 AK294221	31886	+	AL713787 TSC_hg19_v1_chr3_+_42190865	31985	+	TSC_hg19_v1_chr3_+_42201684 BX647199 NM_014965 BC015922 AK000754 AM392573 AM393596 CU677507 EU446989	42893	+	AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1##BX647199|TRAK1|22906|trafficking protein, kinesin binding 1##NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1##BC015922|TRAK1|22906|trafficking protein, kinesin binding 1##AK000754|TRAK1|22906|trafficking protein, kinesin binding 1##AM392573|TRAK1|22906|trafficking protein, kinesin binding 1##AM393596|TRAK1|22906|trafficking protein, kinesin binding 1##EU446989|TRAK1|22906|trafficking protein, kinesin binding 1	1.030498	CTCF.p2:-1:0.988
chr5	101489156	101489253	reg1022436.p1	5.727	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-1250276	-	AF529367 TSC_hg19_v1_chr5_+_99871306	-1617934	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-1618131	+	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	142904	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	345429	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	712326	+	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase	0.989666	CTCF.p2:5:0.990
chr5	176046405	176046492	reg1026740.p1	5.727	+	TSC_hg19_v1_chr5_-_176037158 BC052950 NM_052899 AB067480	-9311	-	NM_017675	-70106	+	AK315055 NM_001171976	-76937	+	S69965 BC002902 TSC_hg19_v1_chr5_-_176057536 JF960950 JF960951 JF960952 JF960953 NM_001001502 NM_003085	11008	-	NM_001099408	11234	+	NM_001006616 NM_012171 NM_130465 TSC_hg19_v1_chr5_+_176074470 AY037146	27982	+	BC052950|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1##NM_052899|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1##AB067480|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1##NM_017675|CDHR2|54825|cadherin-related family member 2##AK315055|CDHR2|54825|cadherin-related family member 2##NM_001171976|CDHR2|54825|cadherin-related family member 2##S69965|SNCB|6620|synuclein, beta##BC002902|SNCB|6620|synuclein, beta##JF960950|SNCB|6620|synuclein, beta##JF960951|SNCB|6620|synuclein, beta##JF960952|SNCB|6620|synuclein, beta##JF960953|SNCB|6620|synuclein, beta##NM_001001502|SNCB|6620|synuclein, beta##NM_003085|SNCB|6620|synuclein, beta##NM_001099408|EIF4E1B|253314|eukaryotic translation initiation factor 4E family member 1B##NM_001006616|TSPAN17|26262|tetraspanin 17##NM_012171|TSPAN17|26262|tetraspanin 17##NM_130465|TSPAN17|26262|tetraspanin 17##AY037146|TSPAN17|26262|tetraspanin 17	0.030839	
chr10	37014511	37014636	reg1024220.p1	5.726	+	AB587328 AB043703 NM_031866	-1084214	-	AK074504 NM_153368	-1120236	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	-1388779	+	AF269087 NM_052997	400211	+	NM_001190489	877285	-	BC132915 BC132917 BC110869 BC021819 AJ491695 AJ492196 NM_021045 TSC_hg19_v1_chr10_-_38146539	1131845	-	AB043703|FZD8|8325|frizzled family receptor 8##NM_031866|FZD8|8325|frizzled family receptor 8##AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AF269087|ANKRD30A|91074|ankyrin repeat domain 30A##NM_052997|ANKRD30A|91074|ankyrin repeat domain 30A##NM_001190489|MTRNR2L7|100288485|MT-RNR2-like 7##BC132915|ZNF248|57209|zinc finger protein 248##BC132917|ZNF248|57209|zinc finger protein 248##BC110869|ZNF248|57209|zinc finger protein 248##BC021819|ZNF248|57209|zinc finger protein 248##AJ491695|ZNF248|57209|zinc finger protein 248##AJ492196|ZNF248|57209|zinc finger protein 248##NM_021045|ZNF248|57209|zinc finger protein 248	0.885489	CTCF.p2:28:0.885
chr10	73156107	73156200	reg1021294.p1	5.726	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-77107	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-77128	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-183773	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	585	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	323439	-	AK074172 NM_001168390	341427	-	BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105	0.584562	CTCF.p2:6:0.585
chr1	23903981	23904161	reg1022191.p2	5.726	+	NM_002167 X69111	-17787	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	-18087	-	L22846 NM_004091	-46360	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	114209	+	TSC_hg19_v1_chr1_+_24018295 BC018970	114228	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	165833	+	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11##BC018970|RPL11|6135|ribosomal protein L11##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)	0.0	
chr6	56563962	56564133	reg1025811.p1	5.726	+	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	-56408	-	BC038763 TSC_hg19_v1_chr6_-_56407722	-156339	-	AF330693 TSC_hg19_v1_chr6_-_56258945	-305123	-	TSC_hg19_v1_chr6_-_56708446 U31850	144425	-	AK294830 TSC_hg19_v1_chr6_-_56716493	152405	-	AK299898 TSC_hg19_v1_chr6_-_56716715	152667	-	AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin##AF330693|COL21A1|81578|collagen, type XXI, alpha 1##U31850|DST|667|dystonin##AK294830|DST|667|dystonin##AK299898|DST|667|dystonin	0.995256	CTCF.p2:-1:0.995
chr9	139929546	139929726	reg1000619.p1	5.726	+	HQ258737 TSC_hg19_v1_chr9_+_139927632 AK093587 AX748216	-2062	+	BC086312 NM_004479	-2345	-	TSC_hg19_v1_chr9_-_139923225 BC144588 BC144589 NM_212533	-6343	-	TSC_hg19_v1_chr9_-_139940543 AK225091 AF272357	10873	-	TSC_hg19_v1_chr9_-_139940559 BC004217	10926	-	TSC_hg19_v1_chr9_-_139940630 AF327349 AK074793 AF285836 NM_015392	11003	-	HQ258737|C9orf139|401563|chromosome 9 open reading frame 139##AK093587|C9orf139|401563|chromosome 9 open reading frame 139##BC086312|FUT7|2529|fucosyltransferase 7 (alpha (1,3) fucosyltransferase)##NM_004479|FUT7|2529|fucosyltransferase 7 (alpha (1,3) fucosyltransferase)##BC144588|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC144589|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##NM_212533|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##AK225091|NPDC1|56654|neural proliferation, differentiation and control, 1##AF272357|NPDC1|56654|neural proliferation, differentiation and control, 1##BC004217|NPDC1|56654|neural proliferation, differentiation and control, 1##AF327349|NPDC1|56654|neural proliferation, differentiation and control, 1##AK074793|NPDC1|56654|neural proliferation, differentiation and control, 1##AF285836|NPDC1|56654|neural proliferation, differentiation and control, 1##NM_015392|NPDC1|56654|neural proliferation, differentiation and control, 1	0.523152	CTCF.p2:67:0.523
chr10	52385060	52385199	reg1024697.p2	5.725	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	-1426	-	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-376789	-	NM_018232	-547244	+	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	114581	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	260264	-	TSC_hg19_v1_chr10_-_52645440 BC054873 AK000324 NM_001198818 NM_001198819 NM_001198820 NM_014576 NM_138932 NM_138933	260306	-	AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor##BC054873|A1CF|29974|APOBEC1 complementation factor##AK000324|A1CF|29974|APOBEC1 complementation factor##NM_001198818|A1CF|29974|APOBEC1 complementation factor##NM_001198819|A1CF|29974|APOBEC1 complementation factor##NM_001198820|A1CF|29974|APOBEC1 complementation factor##NM_014576|A1CF|29974|APOBEC1 complementation factor##NM_138932|A1CF|29974|APOBEC1 complementation factor##NM_138933|A1CF|29974|APOBEC1 complementation factor	0.45854	CTCF.p2:8:0.459
chr19	50550289	50550391	reg1025217.p1	5.725	+	TSC_hg19_v1_chr19_+_50529309 AK292452	-21017	+	TSC_hg19_v1_chr19_+_50529276 AK302293 BC018612 BX648093	-21056	+	AB032967 NM_001006656 NM_015428 TSC_hg19_v1_chr19_+_50529261	-21104	+	DQ890967 DQ894140 AK307321 BC029535 AY358196 AB590459 AK131024 NM_152358	116068	-	TSC_hg19_v1_chr19_+_50691445 AK125082	141101	+	TSC_hg19_v1_chr19_+_50706878 AY165122 BC129803 NM_001077186 NM_001145809 NM_024729 AK307783 AB290169	156551	+	AK292452|ZNF473|25888|zinc finger protein 473##AK302293|ZNF473|25888|zinc finger protein 473##BC018612|ZNF473|25888|zinc finger protein 473##BX648093|ZNF473|25888|zinc finger protein 473##AB032967|ZNF473|25888|zinc finger protein 473##NM_001006656|ZNF473|25888|zinc finger protein 473##NM_015428|ZNF473|25888|zinc finger protein 473##DQ890967|IZUMO2|126123|IZUMO family member 2##DQ894140|IZUMO2|126123|IZUMO family member 2##AK307321|IZUMO2|126123|IZUMO family member 2##BC029535|IZUMO2|126123|IZUMO family member 2##AY358196|IZUMO2|126123|IZUMO family member 2##AK131024|IZUMO2|126123|IZUMO family member 2##NM_152358|IZUMO2|126123|IZUMO family member 2##AK125082|MYH14|79784|myosin, heavy chain 14, non-muscle##AY165122|MYH14|79784|myosin, heavy chain 14, non-muscle##BC129803|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_001077186|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_001145809|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_024729|MYH14|79784|myosin, heavy chain 14, non-muscle##AK307783|MYH14|79784|myosin, heavy chain 14, non-muscle##AB290169|MYH14|79784|myosin, heavy chain 14, non-muscle	0.2971	CTCF.p2:-17:0.297
chr2	109306557	109306694	reg1026592.p1	5.725	+	TSC_hg19_v1_chr2_+_109271492 AK302411 AK312178	-35137	+	AF527759 NM_001193485	-35358	+	TSC_hg19_v1_chr2_+_109237706 AK304260 NM_001193484 AF527760 AK310547	-68922	+	TSC_hg19_v1_chr2_+_109335970 D42063 NM_006267	29313	+	TSC_hg19_v1_chr2_+_109384621 AY170822	78058	+	TSC_hg19_v1_chr2_+_109403228 BC050579 AK125199 AK057307 NM_144978 BC015847 BC038421	96577	+	AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3##AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK304260|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193484|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527760|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK310547|LIMS1|3987|LIM and senescent cell antigen-like domains 1##D42063|RANBP2|5903|RAN binding protein 2##NM_006267|RANBP2|5903|RAN binding protein 2##AY170822|RANBP2|5903|RAN binding protein 2##BC050579|CCDC138|165055|coiled-coil domain containing 138##AK125199|CCDC138|165055|coiled-coil domain containing 138##AK057307|CCDC138|165055|coiled-coil domain containing 138##NM_144978|CCDC138|165055|coiled-coil domain containing 138##BC015847|CCDC138|165055|coiled-coil domain containing 138##BC038421|CCDC138|165055|coiled-coil domain containing 138	0.58281	CTCF.p2:2:0.583
chr7	1060517	1060667	reg1025136.p1	5.725	+	TSC_hg19_v1_chr7_+_1022978 AK000366	-37623	+	TSC_hg19_v1_chr7_+_1022816 BC025761 NM_017781	-37774	+	BC042434 BC053372 TSC_hg19_v1_chr7_-_1015171 BC058158 AK023185 BC110420 BC070383 AK290517 AY957566 BC103632 NM_001031617	-45403	-	TSC_hg19_v1_chr7_-_1067984 L07392 BC025971	7365	-	BC014241 NM_138445 AB464540 DQ892659 DQ895899	36552	+	NM_001039966 NM_001505 AF015257	65884	+	AK000366|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##BC025761|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##NM_017781|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##BC042434|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC053372|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC058158|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK023185|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC110420|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC070383|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK290517|ADAP1|11033|ArfGAP with dual PH domains 1##AY957566|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC103632|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_001031617|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC025971|C7orf50|84310|chromosome 7 open reading frame 50##BC014241|GPR146|115330|G protein-coupled receptor 146##NM_138445|GPR146|115330|G protein-coupled receptor 146##DQ892659|GPR146|115330|G protein-coupled receptor 146##DQ895899|GPR146|115330|G protein-coupled receptor 146##NM_001039966|GPER|2852|G protein-coupled estrogen receptor 1##NM_001505|GPER|2852|G protein-coupled estrogen receptor 1##AF015257|GPER|2852|G protein-coupled estrogen receptor 1	0.694944	CTCF.p2:-24:0.695
chr8	135613945	135614070	reg1022478.p1	5.725	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-1029910	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-1304510	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1410677	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	94787	-	TSC_hg19_v1_chr8_-_135725053 AB463359	111072	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	111267	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.052498	
chr19	35644754	35644860	reg1023718.p1	5.724	+	NM_022006 TSC_hg19_v1_chr19_+_35634167 AK296405 BC018619 AK057825 DQ892489 DQ895700 AB528536	-10613	+	BC029943 TSC_hg19_v1_chr19_-_35633495	-11382	-	NM_005031	-14416	+	TSC_hg19_v1_chr19_+_35645637 NM_014164 AK304012	819	+	TSC_hg19_v1_chr19_+_35645641 AB072911 BC013834 NM_144779 AY358991 BC018798 AF161462 NM_001164605	935	+	BC009642 TSC_hg19_v1_chr19_+_35646116	1276	+	NM_022006|FXYD7|53822|FXYD domain containing ion transport regulator 7##BC018619|FXYD7|53822|FXYD domain containing ion transport regulator 7##AK057825|FXYD7|53822|FXYD domain containing ion transport regulator 7##DQ892489|FXYD7|53822|FXYD domain containing ion transport regulator 7##DQ895700|FXYD7|53822|FXYD domain containing ion transport regulator 7##BC029943|LGI4|163175|leucine-rich repeat LGI family, member 4##NM_005031|FXYD1|5348|FXYD domain containing ion transport regulator 1##NM_014164|FXYD5|53827|FXYD domain containing ion transport regulator 5##AK304012|FXYD5|53827|FXYD domain containing ion transport regulator 5##AB072911|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC013834|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_144779|FXYD5|53827|FXYD domain containing ion transport regulator 5##AY358991|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC018798|FXYD5|53827|FXYD domain containing ion transport regulator 5##AF161462|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_001164605|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC009642|FXYD5|53827|FXYD domain containing ion transport regulator 5	0.183996	
chr19	35738773	35738905	reg1022114.p2	5.724	+	BC039080 HQ258231 AK098526 NM_152481 BC117457 BC117459	-19235	-	BC009642 TSC_hg19_v1_chr19_+_35646116	-92756	+	TSC_hg19_v1_chr19_+_35645641 AB072911 BC013834 NM_144779 AY358991 BC018798 AF161462 NM_001164605	-93097	+	TSC_hg19_v1_chr19_+_35739294 AK126834	452	+	TSC_hg19_v1_chr19_+_35739638 NM_015925 NM_205834 NM_205835 BC047376	775	+	TSC_hg19_v1_chr19_+_35739778 AB527667 AF130366	940	+	BC039080|FAM187B|148109|family with sequence similarity 187, member B##HQ258231|FAM187B|148109|family with sequence similarity 187, member B##AK098526|FAM187B|148109|family with sequence similarity 187, member B##NM_152481|FAM187B|148109|family with sequence similarity 187, member B##BC117457|FAM187B|148109|family with sequence similarity 187, member B##BC117459|FAM187B|148109|family with sequence similarity 187, member B##BC009642|FXYD5|53827|FXYD domain containing ion transport regulator 5##AB072911|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC013834|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_144779|FXYD5|53827|FXYD domain containing ion transport regulator 5##AY358991|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC018798|FXYD5|53827|FXYD domain containing ion transport regulator 5##AF161462|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_001164605|FXYD5|53827|FXYD domain containing ion transport regulator 5##AK126834|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_015925|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_205834|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_205835|LSR|51599|lipolysis stimulated lipoprotein receptor##BC047376|LSR|51599|lipolysis stimulated lipoprotein receptor##AF130366|LSR|51599|lipolysis stimulated lipoprotein receptor	0.920959	CTCF.p2:3:0.921
chr5	138427562	138427684	reg1023386.p1	5.724	+	HQ589335 TSC_hg19_v1_chr5_+_138211097	-216532	+	TSC_hg19_v1_chr5_-_138211057 NM_015564	-216564	-	AK309790 TSC_hg19_v1_chr5_-_138211025 AB007876 BC028172 AK291064 AK297332	-216610	-	AF547994 TSC_hg19_v1_chr5_-_138533996 AK075177	106366	-	TSC_hg19_v1_chr5_-_138533998 AY358950 BC011568	106385	-	TSC_hg19_v1_chr5_-_138534058 AJ299442 AK074624 NM_001037633 NM_022464	106423	-	HQ589335|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AF547994|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK075177|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AY358950|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##BC011568|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AJ299442|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK074624|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_001037633|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_022464|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)	0.032201	
chr7	16111002	16111137	reg1025668.p1	5.724	+	TSC_hg19_v1_chr7_-_15726309 AK309472 X82629 NM_005924	-384778	-	AB463880 CR536553 CU677801 L36328 TSC_hg19_v1_chr7_-_15726203 BC017021 AK313386	-384940	-	BC108676 AK131284 NM_001004320	-509463	-	NM_001101417 NM_001101426	349877	-	AB059270 CU678977 AB590718 AK315682 BC008484 AF361494 NM_015464	394313	-	NM_001195280	455435	+	AK309472|MEOX2|4223|mesenchyme homeobox 2##X82629|MEOX2|4223|mesenchyme homeobox 2##NM_005924|MEOX2|4223|mesenchyme homeobox 2##CR536553|MEOX2|4223|mesenchyme homeobox 2##L36328|MEOX2|4223|mesenchyme homeobox 2##BC017021|MEOX2|4223|mesenchyme homeobox 2##AK313386|MEOX2|4223|mesenchyme homeobox 2##BC108676|AGMO|392636|alkylglycerol monooxygenase##AK131284|AGMO|392636|alkylglycerol monooxygenase##NM_001004320|AGMO|392636|alkylglycerol monooxygenase##NM_001101417|ISPD|729920|isoprenoid synthase domain containing##NM_001101426|ISPD|729920|isoprenoid synthase domain containing##AB059270|SOSTDC1|25928|sclerostin domain containing 1##AK315682|SOSTDC1|25928|sclerostin domain containing 1##BC008484|SOSTDC1|25928|sclerostin domain containing 1##AF361494|SOSTDC1|25928|sclerostin domain containing 1##NM_015464|SOSTDC1|25928|sclerostin domain containing 1##NM_001195280|LRRC72|100506049|leucine rich repeat containing 72	0.060842	
chr8	55649102	55649203	reg1025156.p2	5.724	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	-120500	+	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	-278636	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-601341	+	BC106028 AY534241 NM_052898	365862	+	AF286340 NM_024831	1036593	+	AK308247 AK056932 NM_152417 BC020835 BC071636	1036745	-	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##AF286340|TGS1|96764|trimethylguanosine synthase 1##NM_024831|TGS1|96764|trimethylguanosine synthase 1##AK308247|TMEM68|137695|transmembrane protein 68##AK056932|TMEM68|137695|transmembrane protein 68##NM_152417|TMEM68|137695|transmembrane protein 68##BC020835|TMEM68|137695|transmembrane protein 68##BC071636|TMEM68|137695|transmembrane protein 68	0.884363	CTCF.p2:0:0.884
chr12	52545994	52546100	reg1024940.p1	5.723	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	-82249	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	-82293	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	-100831	+	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	39697	-	BC117348 BC126393 BC038743 NM_001242696	58516	-	NM_005556 TSC_hg19_v1_chr12_+_52626966	80915	+	BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80##BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##NM_005556|KRT7|3855|keratin 7	0.9932	CTCF.p2:-9:0.993
chr20	32503617	32503708	reg1021134.p1	5.723	+	TSC_hg19_v1_chr20_+_32399155 AB100261 BC033859 AY726594 AY329085	-104442	+	TSC_hg19_v1_chr20_+_32399127 NM_176812	-104576	+	BC132873 BC144188 BC157823 BC146811 BC094738 NM_032819 BC063492 BC040440 AB587355 HQ258664	-183866	+	TSC_hg19_v1_chr20_+_32581531 NM_007367 NM_016732	77817	+	TSC_hg19_v1_chr20_+_32581567 AK226085	77925	+	TSC_hg19_v1_chr20_+_32581716 BC103753 AK299766	78042	+	AB100261|CHMP4B|128866|charged multivesicular body protein 4B##BC033859|CHMP4B|128866|charged multivesicular body protein 4B##AY726594|CHMP4B|128866|charged multivesicular body protein 4B##AY329085|CHMP4B|128866|charged multivesicular body protein 4B##NM_176812|CHMP4B|128866|charged multivesicular body protein 4B##BC132873|ZNF341|84905|zinc finger protein 341##BC144188|ZNF341|84905|zinc finger protein 341##BC157823|ZNF341|84905|zinc finger protein 341##BC146811|ZNF341|84905|zinc finger protein 341##BC094738|ZNF341|84905|zinc finger protein 341##NM_032819|ZNF341|84905|zinc finger protein 341##BC063492|ZNF341|84905|zinc finger protein 341##BC040440|ZNF341|84905|zinc finger protein 341##HQ258664|ZNF341|84905|zinc finger protein 341##NM_007367|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##NM_016732|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK226085|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC103753|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK299766|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))	0.678834	CTCF.p2:3:0.679
chr20	34207586	34207679	reg1021595.p1	5.723	+	TSC_hg19_v1_chr20_+_34203752 AF262992 NM_003116 BC143783 AB464242	-3797	+	BC029951 AY461812 TSC_hg19_v1_chr20_-_34195432	-12210	-	TSC_hg19_v1_chr20_+_34129833 CU679479 CU680742 AF091085	-77787	+	NM_003915	34198	-	TSC_hg19_v1_chr20_-_34243133 AB385382 DQ893493 DQ896437	35549	-	TSC_hg19_v1_chr20_-_34252792 AF345332 AF393214 BC001142 AB018308	45161	-	AF262992|SPAG4|6676|sperm associated antigen 4##NM_003116|SPAG4|6676|sperm associated antigen 4##BC143783|SPAG4|6676|sperm associated antigen 4##BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene##AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene##AF091085|ERGIC3|51614|ERGIC and golgi 3##NM_003915|CPNE1|8904|copine I##DQ893493|RBM12|10137|RNA binding motif protein 12##DQ896437|RBM12|10137|RNA binding motif protein 12##AF345332|RBM12|10137|RNA binding motif protein 12##AF393214|RBM12|10137|RNA binding motif protein 12##BC001142|CPNE1|8904|copine I##AB018308|RBM12|10137|RNA binding motif protein 12	0.0	
chr22	22895242	22895348	reg1023297.p1	5.723	+	BC053901 AK093108 NM_080740	-20691	-	AK097608 NM_080764	-31791	-	TSC_hg19_v1_chr22_-_22863061 BC040020	-32214	-	BC014074 NM_206955 NM_206956 AK304593 TSC_hg19_v1_chr22_-_22901678 BC039731 U65011 NM_006115 NM_206953 NM_206954 BC022008	6299	-	NM_199127 X98922 CU686896 BC069534	93503	+	TSC_hg19_v1_chr22_+_23010757 L29162	115465	+	BC053901|ZNF280A|129025|zinc finger protein 280A##AK093108|ZNF280A|129025|zinc finger protein 280A##NM_080740|ZNF280A|129025|zinc finger protein 280A##AK097608|ZNF280B|140883|zinc finger protein 280B##NM_080764|ZNF280B|140883|zinc finger protein 280B##BC040020|ZNF280B|140883|zinc finger protein 280B##BC014074|PRAME|23532|preferentially expressed antigen in melanoma##NM_206955|PRAME|23532|preferentially expressed antigen in melanoma##NM_206956|PRAME|23532|preferentially expressed antigen in melanoma##AK304593|PRAME|23532|preferentially expressed antigen in melanoma##BC039731|PRAME|23532|preferentially expressed antigen in melanoma##U65011|PRAME|23532|preferentially expressed antigen in melanoma##NM_006115|PRAME|23532|preferentially expressed antigen in melanoma##NM_206953|PRAME|23532|preferentially expressed antigen in melanoma##NM_206954|PRAME|23532|preferentially expressed antigen in melanoma##BC022008|PRAME|23532|preferentially expressed antigen in melanoma##NM_199127|GGTLC2|91227|gamma-glutamyltransferase light chain 2##X98922|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC069534|GGTLC2|91227|gamma-glutamyltransferase light chain 2	0.02867	
chr3	14413669	14413735	reg1033719.p2	5.723	+	TSC_hg19_v1_chr3_+_14220355 AJ238095 AB463841 CR457185	-193351	+	TSC_hg19_v1_chr3_+_14220336 AF182418 AF182289 BC007055 AK312189	-193368	+	NM_014463 TSC_hg19_v1_chr3_+_14220319	-193428	+	TSC_hg19_v1_chr3_+_14444072 AK303649	30367	+	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	30414	+	NM_001080423	169885	-	AJ238095|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##CR457185|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182418|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182289|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC007055|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312189|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_014463|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2	0.0	
chr4	185249451	185249631	reg1025482.p2	5.723	+	BC035035 AY358676 AK057370 NM_153343	-110476	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-421630	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-421721	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	146140	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	321060	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	321292	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr6_mcf_hap5	2265364	2265495	reg1028923.p1	5.723	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.51578	CTCF.p2:-12:0.516
chr8	52374658	52374839	reg1019928.p4	5.723	+	AJ003030 NM_018967	-1550152	+	NM_001007176 BC017981 AJ276240	-2389839	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-2540838	-	EU170240 AY877349 NM_144651	347205	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	436854	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	436979	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.0	
chr9	114738142	114738267	reg1025091.p2	5.723	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-78737	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-79090	+	AL833535 NM_173521	-192429	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	199316	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	357083	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	357645	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.974786	CTCF.p2:-7:0.975
chr10	91908387	91908524	reg1025496.p1	5.722	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-409688	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-447080	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-503131	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	708991	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	709278	-	TSC_hg19_v1_chr10_+_92631241 BC006991	722802	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.893281	CTCF.p2:-18:0.893
chr20	19165861	19165976	reg1023387.p2	5.722	+	NM_001242671	-355080	-	AF418568 AF418570 AX721297 NM_178483 AK130970 AY248902 BC105121 BC112024	-371520	+	TSC_hg19_v1_chr20_+_18568661 NM_080820 BC045167 AK074304 BC100923 BC100924 BC100925 BC100926 AK291440 AF332356 CU692252	-597268	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	27367	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	27535	+	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	701225	+	NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AF418568|C20orf79|140856|chromosome 20 open reading frame 79##AF418570|C20orf79|140856|chromosome 20 open reading frame 79##NM_178483|C20orf79|140856|chromosome 20 open reading frame 79##AK130970|C20orf79|140856|chromosome 20 open reading frame 79##AY248902|C20orf79|140856|chromosome 20 open reading frame 79##BC105121|C20orf79|140856|chromosome 20 open reading frame 79##BC112024|C20orf79|140856|chromosome 20 open reading frame 79##NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2	0.293883	CTCF.p2:25:0.294
chr20	2073977	2074078	reg1022533.p2	5.722	+	AK316076 BC026334 AK295512 TSC_hg19_v1_chr20_-_1974732 AK308747 NM_001190898 NM_001190899 NM_024411	-99212	-	NM_001190900	-99634	-	AK289618 NM_001190892	-100576	-	GQ281297 NM_080836 AK314728	8574	+	BC140883 BC140884 TSC_hg19_v1_chr20_+_2083583 AB527968 AF195026 BC111573 BC017340 AK302629	9488	+	TSC_hg19_v1_chr20_-_2083527 BC034792	9499	-	AK316076|PDYN|5173|prodynorphin##BC026334|PDYN|5173|prodynorphin##NM_001190898|PDYN|5173|prodynorphin##NM_001190899|PDYN|5173|prodynorphin##NM_024411|PDYN|5173|prodynorphin##NM_001190900|PDYN|5173|prodynorphin##AK289618|PDYN|5173|prodynorphin##NM_001190892|PDYN|5173|prodynorphin##GQ281297|STK35|140901|serine/threonine kinase 35##NM_080836|STK35|140901|serine/threonine kinase 35##AK314728|STK35|140901|serine/threonine kinase 35##BC140883|STK35|140901|serine/threonine kinase 35##BC140884|STK35|140901|serine/threonine kinase 35##AF195026|STK35|140901|serine/threonine kinase 35##BC111573|STK35|140901|serine/threonine kinase 35##BC017340|STK35|140901|serine/threonine kinase 35##AK302629|STK35|140901|serine/threonine kinase 35	0.0	
chr11	76385633	76385813	reg1022281.p2	5.721	+	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	-3914	-	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	-4755	-	TSC_hg19_v1_chr11_+_76156061 AK304043 BC033404 NM_020193 AK309621 BC021688 AK125114	-229620	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	108554	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	186209	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	186270	+	BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##AK304043|C11orf30|56946|chromosome 11 open reading frame 30##BC033404|C11orf30|56946|chromosome 11 open reading frame 30##NM_020193|C11orf30|56946|chromosome 11 open reading frame 30##AK309621|C11orf30|56946|chromosome 11 open reading frame 30##BC021688|C11orf30|56946|chromosome 11 open reading frame 30##AK125114|C11orf30|56946|chromosome 11 open reading frame 30##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3	0.0	
chr14	71633347	71633449	reg1024121.p1	5.721	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-258947	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-259265	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-357589	-	AF090989 AF090990 NM_015556	362643	+	AK294895 NM_001204423	765418	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	765755	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.0	
chr16	32993830	32994010	reg1021539.p1	5.721	+	AK300387 TSC_hg19_v1_chr16_+_32752635	-241284	+	AL133588 NM_016212	-305868	-	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	-306487	-	AL133588 NM_016212	211059	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	211678	+	AL133588 NM_016212	267594	+	AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3	4.442663	CTCF.p2:-10:0.969	CTCF.p2:28:0.971	CTCF.p2:48:0.496	CTCF.p2:-49:0.878	CTCF.p2:-107:0.957
chr16	75353826	75353897	reg1023818.p1	5.721	+	AK124815 NM_001170715	-51911	-	AK295809 NM_001170716	-53169	-	TSC_hg19_v1_chr16_-_75299906 AK302617 NM_001170720 AK027608 AK293808 NM_001170714 NM_001170718	-54036	-	BT009819 CR542111 AB463545 CU674490 DQ890998 EU176574 AK313948 TSC_hg19_v1_chr16_-_75467369 AB009285 D85939 BC000991 NM_006324 AK226031	113464	-	TSC_hg19_v1_chr16_-_75498315 AK094930	144436	-	AM392693 AM393662 AY302139 CU676164 TSC_hg19_v1_chr16_-_75498577	144677	-	AK124815|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170715|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK295809|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170716|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK302617|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170720|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK027608|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK293808|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170714|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170718|BCAR1|9564|breast cancer anti-estrogen resistance 1##BT009819|CFDP1|10428|craniofacial development protein 1##CR542111|CFDP1|10428|craniofacial development protein 1##DQ890998|CFDP1|10428|craniofacial development protein 1##EU176574|CFDP1|10428|craniofacial development protein 1##AK313948|CFDP1|10428|craniofacial development protein 1##AB009285|CFDP1|10428|craniofacial development protein 1##D85939|CFDP1|10428|craniofacial development protein 1##BC000991|CFDP1|10428|craniofacial development protein 1##NM_006324|CFDP1|10428|craniofacial development protein 1##AK226031|CFDP1|10428|craniofacial development protein 1##AK094930|TMEM170A|124491|transmembrane protein 170A##AY302139|TMEM170A|124491|transmembrane protein 170A	0.0	
chr2	102490121	102490294	reg1024685.p2	5.721	+	TSC_hg19_v1_chr2_+_102314168 NM_001242560 NM_004834 NM_145686 BC064691 AK296396 AF096300 NM_001242559 NM_145687 AB384511 AY212247 AY834276	-175855	+	AK131289 AK298610 NM_001145664 TSC_hg19_v1_chr2_-_102091212	-399014	-	TSC_hg19_v1_chr2_-_102003966 BC032949 BC047514 NM_153836 AB046109	-486218	-	TSC_hg19_v1_chr2_+_102508334 BC045694	18135	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	18325	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	118156	+	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK131289|RFX8|731220|regulatory factor X, 8##AK298610|RFX8|731220|regulatory factor X, 8##NM_001145664|RFX8|731220|regulatory factor X, 8##BC032949|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC047514|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_153836|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AB046109|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II	0.059044	
chr4	115299621	115299708	reg1023200.p2	5.721	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-398825	-	TSC_hg19_v1_chr4_-_114682923 NM_001221 NM_172114 NM_172115 NM_172127 NM_172128 NM_172129	-616694	-	TSC_hg19_v1_chr4_-_114682619 AK055642 AB209288	-617008	-	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	219919	+	NM_003360 U30930	243858	+	BC113075 BC012326 AK289670 AB036429 NM_022569	735317	-	AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##NM_001221|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172114|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172115|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172127|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172128|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172129|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK055642|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AB209288|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	0.0	
chr7	34173975	34174071	reg1023602.p2	5.721	+	AK289963 NM_133468 AK096150 BC060868	-228881	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-1004942	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-1025046	-	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	523896	+	DQ287932 NM_015283	903629	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	1051769	-	AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)	0.953759	CTCF.p2:-33:0.954
chr7	2424179	2424319	reg1025871.p1	5.720	+	TSC_hg19_v1_chr7_+_2394547 BC110865	-29702	+	BC001173 TSC_hg19_v1_chr7_+_2394525	-29724	+	TSC_hg19_v1_chr7_+_2394509 U62583	-29733	+	TSC_hg19_v1_chr7_+_2443191 NM_001243794 NM_001243795 NM_018641	18931	+	TSC_hg19_v1_chr7_+_2443245 BC095492 BC002918 BC015954 AK223191 AK223211 AK313484 AF239822 AY358574	18994	+	AK096284 NM_001166355	127913	+	BC110865|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##BC001173|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##U62583|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##NM_001243794|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_001243795|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_018641|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC095492|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC002918|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC015954|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK223191|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK223211|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK313484|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AF239822|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AY358574|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK096284|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166355|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	0.965741	CTCF.p2:-22:0.966
chr9	132175412	132175493	reg1021760.p2	5.720	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-92157	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-234912	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-234945	-	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	75902	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	75989	+	BC112353 AK093122 AX747938 NM_199350	207585	-	AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50	0.0	
chrX	69884712	69884813	reg1021440.p1	5.720	+	TSC_hg19_v1_chrX_+_69674948 AK303377 NM_001166278	-209828	+	TSC_hg19_v1_chrX_+_69672415 AK304020 AK316518	-212356	+	TSC_hg19_v1_chrX_+_69672143 AB033058 NM_020730	-212587	+	AK057523 AK292471 BC036016 NM_001003811 NM_031276	243801	-	AF320612 BC033816 AX721169 BC021242 AK074865 AK075014 NM_001048164 NM_032803	266187	-	BT007203 TSC_hg19_v1_chrX_-_70288224 BC080535 AF171229 BC103847 BC103848 BC020559 NM_013346 AK312977	403438	-	AK303377|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_001166278|DLG3|1741|discs, large homolog 3 (Drosophila)##AK304020|DLG3|1741|discs, large homolog 3 (Drosophila)##AK316518|DLG3|1741|discs, large homolog 3 (Drosophila)##AB033058|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_020730|DLG3|1741|discs, large homolog 3 (Drosophila)##AK057523|TEX11|56159|testis expressed 11##AK292471|TEX11|56159|testis expressed 11##BC036016|TEX11|56159|testis expressed 11##NM_001003811|TEX11|56159|testis expressed 11##NM_031276|TEX11|56159|testis expressed 11##AF320612|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##BC033816|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK074865|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK075014|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_001048164|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_032803|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##BT007203|SNX12|29934|sorting nexin 12##BC080535|SNX12|29934|sorting nexin 12##AF171229|SNX12|29934|sorting nexin 12##BC103847|SNX12|29934|sorting nexin 12##BC103848|SNX12|29934|sorting nexin 12##BC020559|SNX12|29934|sorting nexin 12##NM_013346|SNX12|29934|sorting nexin 12##AK312977|SNX12|29934|sorting nexin 12	0.966722	CTCF.p2:12:0.967
chr1	9310197	9310336	reg1027861.p1	5.719	+	CR749282 TSC_hg19_v1_chr1_+_9299950	-10328	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	-15349	+	TSC_hg19_v1_chr1_+_9294832 BC081559	-15451	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	42671	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	42703	+	TSC_hg19_v1_chr1_+_9415945 CU677397	105680	+	CR749282|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1	0.758606	CTCF.p2:21:0.759
chr4	17470354	17470501	reg1027606.p1	5.719	+	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	-570042	-	AK226029 TSC_hg19_v1_chr4_-_16900258	-570168	-	AK300119 AB463834 DQ891981 DQ895171 AK312881 TSC_hg19_v1_chr4_-_16900210 AF068651 AF047337 AF064492 AF064493 BC034019	-570301	-	AB528218 AM393718 DQ891926 DQ895113 CU674280 TSC_hg19_v1_chr4_-_17513714 X04882 BC000576 AK124382 AK296622 AK223437 AK289773 NM_000320	43339	-	BC127863 NM_001079827	46360	+	TSC_hg19_v1_chr4_+_17578852 NM_015907	108455	+	AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2##AK226029|LDB2|9079|LIM domain binding 2##AK300119|LDB2|9079|LIM domain binding 2##DQ891981|LDB2|9079|LIM domain binding 2##DQ895171|LDB2|9079|LIM domain binding 2##AK312881|LDB2|9079|LIM domain binding 2##AF068651|LDB2|9079|LIM domain binding 2##AF047337|LDB2|9079|LIM domain binding 2##AF064492|LDB2|9079|LIM domain binding 2##AF064493|LDB2|9079|LIM domain binding 2##BC034019|LDB2|9079|LIM domain binding 2##AM393718|QDPR|5860|quinoid dihydropteridine reductase##DQ891926|QDPR|5860|quinoid dihydropteridine reductase##DQ895113|QDPR|5860|quinoid dihydropteridine reductase##X04882|QDPR|5860|quinoid dihydropteridine reductase##BC000576|QDPR|5860|quinoid dihydropteridine reductase##AK124382|QDPR|5860|quinoid dihydropteridine reductase##AK296622|QDPR|5860|quinoid dihydropteridine reductase##AK223437|QDPR|5860|quinoid dihydropteridine reductase##AK289773|QDPR|5860|quinoid dihydropteridine reductase##NM_000320|QDPR|5860|quinoid dihydropteridine reductase##BC127863|CLRN2|645104|clarin 2##NM_001079827|CLRN2|645104|clarin 2##NM_015907|LAP3|51056|leucine aminopeptidase 3	0.010408	
chr5	108255759	108255892	reg1024113.p2	5.719	+	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	-171153	+	AK293376 J03358 NM_005246 AK296874	-172263	+	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	-191845	-	BC030826 AB007898 TSC_hg19_v1_chr5_-_108745619 AK291759 NM_014819	489796	-	TSC_hg19_v1_chr5_+_109025072 BC031659	769239	+	TSC_hg19_v1_chr5_+_109025096 BC111062	769272	+	AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##AB593118|HP07349|100652853|uncharacterized protein HP07349##BC030826|PJA2|9867|praja ring finger 2##AB007898|PJA2|9867|praja ring finger 2##AK291759|PJA2|9867|praja ring finger 2##NM_014819|PJA2|9867|praja ring finger 2##BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1	0.992253	CTCF.p2:3:0.992
chr6	87646921	87647073	reg1025582.p1	5.719	+	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	-1258560	-	TSC_hg19_v1_chr6_-_86353055 AF037448 NM_001159677 NM_006372	-1293972	-	TSC_hg19_v1_chr6_-_86352716 AF155568	-1294282	-	NM_000865	26	+	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	157821	-	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	218292	+	BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##AF037448|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159677|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_006372|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AF155568|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292	0.93147	CTCF.p2:-38:0.931
chr6_qbl_hap6	2990902	2991005	reg1023286.p1	5.719	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.016416	
chr7	2288756	2288936	reg1024476.p1	5.719	+	BC065367 AB025238 AB025239 AB025242 NM_198953 NM_198954 BC022818 BC040144 CU677071	-6313	+	AB025233 NM_002452 NM_198948 NM_198949 BC051375 AB025234 AB025235 AB025240 BC014618 AK026631 AB025236 AB025237 AB025241 NM_198950 NM_198952	-6971	+	TSC_hg19_v1_chr7_-_2281824 BC017181 AF093415 NM_013393 AK302060	-7013	-	TSC_hg19_v1_chr7_-_2354018 BC007785	65178	-	TSC_hg19_v1_chr7_-_2354077 CU692368 DQ892508 DQ895722 AK074544 AF121858 AK315670 BC021565 NM_013321	65228	-	TSC_hg19_v1_chr7_+_2394488 NM_001037283 NM_003751 AK302058	105616	+	BC065367|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025238|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025239|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025242|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198953|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198954|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC022818|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC040144|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025233|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_002452|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198948|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198949|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC051375|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025234|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025235|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025240|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC014618|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AK026631|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025236|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025237|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025241|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198950|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198952|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC017181|FTSJ2|29960|FtsJ homolog 2 (E. coli)##AF093415|FTSJ2|29960|FtsJ homolog 2 (E. coli)##NM_013393|FTSJ2|29960|FtsJ homolog 2 (E. coli)##AK302060|FTSJ2|29960|FtsJ homolog 2 (E. coli)##BC007785|SNX8|29886|sorting nexin 8##DQ892508|SNX8|29886|sorting nexin 8##DQ895722|SNX8|29886|sorting nexin 8##AK074544|SNX8|29886|sorting nexin 8##AF121858|SNX8|29886|sorting nexin 8##AK315670|SNX8|29886|sorting nexin 8##BC021565|SNX8|29886|sorting nexin 8##NM_013321|SNX8|29886|sorting nexin 8##NM_001037283|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##NM_003751|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##AK302058|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B	0.021249	
chr15	49267993	49268137	reg1027163.p1	5.718	+	BC033907 NM_203349	-12425	-	TSC_hg19_v1_chr15_+_49170330 NM_014335 BC114944 BC114946 AK315365 AF092135 AF109873 AF349444 AK098383 AL109701 BC024151 AL357456 BC007944 AB527924 AF274951	-97693	+	BC117182 TSC_hg19_v1_chr15_-_49103277 AB020719 BC069186 AK303805 BX648822 BC107721 NM_001194998 NM_014985	-164803	-	CU689588 AB385300 TSC_hg19_v1_chr15_-_49338644 D87445 AK307480 AK308183 BC008635 BC033001 NM_001193489 NM_014701	70571	-	AF120268 L40388 TSC_hg19_v1_chr15_-_49447811 AB462991 CR542063 CU680378 EU446744 EU831466 EU831553 AK222590 AB209799 AF100762 AF212227 AF084260 BC012629 AK312643 AK295598 NM_001143887 NM_004236	179744	-	TSC_hg19_v1_chr15_+_49447990 AF461816 AL832745 NM_001001556	179926	+	BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_014335|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114946|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK315365|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF092135|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF109873|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF349444|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK098383|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL109701|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC024151|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL357456|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC007944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC117182|CEP152|22995|centrosomal protein 152kDa##AB020719|CEP152|22995|centrosomal protein 152kDa##BC069186|CEP152|22995|centrosomal protein 152kDa##AK303805|CEP152|22995|centrosomal protein 152kDa##BX648822|CEP152|22995|centrosomal protein 152kDa##BC107721|CEP152|22995|centrosomal protein 152kDa##NM_001194998|CEP152|22995|centrosomal protein 152kDa##NM_014985|CEP152|22995|centrosomal protein 152kDa##D87445|SECISBP2L|9728|SECIS binding protein 2-like##AK307480|SECISBP2L|9728|SECIS binding protein 2-like##AK308183|SECISBP2L|9728|SECIS binding protein 2-like##BC008635|SECISBP2L|9728|SECIS binding protein 2-like##BC033001|SECISBP2L|9728|SECIS binding protein 2-like##NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like##NM_014701|SECISBP2L|9728|SECIS binding protein 2-like##AF120268|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##L40388|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##CR542063|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU446744|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831466|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831553|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK222590|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AB209799|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF100762|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF212227|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF084260|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##BC012629|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK312643|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK295598|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_001143887|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_004236|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF461816|GALK2|2585|galactokinase 2##AL832745|GALK2|2585|galactokinase 2##NM_001001556|GALK2|2585|galactokinase 2	0.0	
chr17	62915567	62915725	reg1025267.p1	5.718	+	TSC_hg19_v1_chr17_-_62915587 AK294371	-50	-	AB011135 NM_199340	-744	-	AB384498 TSC_hg19_v1_chr17_-_62893379 BC043145 BC048966	-22255	-	TSC_hg19_v1_chr17_-_62971685 BX537538 AK056627 BC063466 AK311317	55974	-	TSC_hg19_v1_chr17_-_63009302 AK026902	93660	-	TSC_hg19_v1_chr17_-_63052724 AB528470 AF493902 CU691408 DQ893572 DQ894448 AK313672	137072	-	AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3##NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC043145|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC048966|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BX537538|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK056627|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##BC063466|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK311317|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AF493902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ893572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ894448|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AK313672|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	0.712584	CTCF.p2:12:0.713
chr9	21183211	21183325	reg1024359.p1	5.718	+	CU686757 AB590744 BC101638 BC101640 BC069329 BC069372 BC069408 V00540 BC096699 M12350 M28586 NM_002175 X00145	-16635	-	NM_002177	-41125	-	AB451491 AB451323 AB451452 BC069314 BC096150 BC096151 BC096152 BC096153 V00547 AB587428 V00546 M25460 M28622 NM_002176	-105395	-	AB590745 HQ258102 HQ258746 BC074965 BC074966 BC113640 BC113642 NM_021068 M27318	4331	-	BC074991 BC074992 BC113994 BC114000 M34913 NM_021057	18934	-	BC069409 BC103972 BC103973 NM_002171 V00551	23873	-	BC101638|IFNA21|3452|interferon, alpha 21##BC101640|IFNA21|3452|interferon, alpha 21##BC069329|IFNA21|3452|interferon, alpha 21##BC069372|IFNA21|3452|interferon, alpha 21##BC069408|IFNA21|3452|interferon, alpha 21##V00540|IFNA21|3452|interferon, alpha 21##BC096699|IFNA21|3452|interferon, alpha 21##M12350|IFNA21|3452|interferon, alpha 21##M28586|IFNA21|3452|interferon, alpha 21##NM_002175|IFNA21|3452|interferon, alpha 21##X00145|IFNA21|3452|interferon, alpha 21##NM_002177|IFNW1|3467|interferon, omega 1##AB451323|IFNB1|3456|interferon, beta 1, fibroblast##AB451452|IFNB1|3456|interferon, beta 1, fibroblast##BC069314|IFNB1|3456|interferon, beta 1, fibroblast##BC096150|IFNB1|3456|interferon, beta 1, fibroblast##BC096151|IFNB1|3456|interferon, beta 1, fibroblast##BC096152|IFNB1|3456|interferon, beta 1, fibroblast##BC096153|IFNB1|3456|interferon, beta 1, fibroblast##V00547|IFNB1|3456|interferon, beta 1, fibroblast##V00546|IFNB1|3456|interferon, beta 1, fibroblast##M25460|IFNB1|3456|interferon, beta 1, fibroblast##M28622|IFNB1|3456|interferon, beta 1, fibroblast##NM_002176|IFNB1|3456|interferon, beta 1, fibroblast##HQ258102|IFNA4|3441|interferon, alpha 4##HQ258746|IFNA4|3441|interferon, alpha 4##BC074965|IFNA4|3441|interferon, alpha 4##BC074966|IFNA4|3441|interferon, alpha 4##BC113640|IFNA4|3441|interferon, alpha 4##BC113642|IFNA4|3441|interferon, alpha 4##NM_021068|IFNA4|3441|interferon, alpha 4##M27318|IFNA4|3441|interferon, alpha 4##BC074991|IFNA7|3444|interferon, alpha 7##BC074992|IFNA7|3444|interferon, alpha 7##BC113994|IFNA7|3444|interferon, alpha 7##BC114000|IFNA7|3444|interferon, alpha 7##M34913|IFNA7|3444|interferon, alpha 7##NM_021057|IFNA7|3444|interferon, alpha 7##BC069409|IFNA10|3446|interferon, alpha 10##BC103972|IFNA10|3446|interferon, alpha 10##BC103973|IFNA10|3446|interferon, alpha 10##NM_002171|IFNA10|3446|interferon, alpha 10##V00551|IFNA10|3446|interferon, alpha 10	0.464497	CTCF.p2:0:0.464
chr10	74008526	74008661	reg1017153.p1	5.717	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-32482	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-32805	+	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	-32829	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	25231	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	106085	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	106333	-	AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	0.0	
chr1	222828291	222828441	reg1028028.p1	5.717	+	TSC_hg19_v1_chr1_+_222817647 AK296712 AX775845	-10714	+	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	-36966	+	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	-65189	-	AL833718 TSC_hg19_v1_chr1_-_222885817 BC015535 BC067805 AK289865 AK022868 BC171848 NM_022831	57396	-	TSC_hg19_v1_chr1_+_222885905 AK056983 NM_144695	57536	+	BC053552 TSC_hg19_v1_chr1_+_222886145 BC113635 BC113637 BC143811 BC105293	57749	+	AK296712|MIA3|375056|melanoma inhibitory activity family, member 3##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AL833718|AIDA|64853|axin interactor, dorsalization associated##BC015535|AIDA|64853|axin interactor, dorsalization associated##BC067805|AIDA|64853|axin interactor, dorsalization associated##AK289865|AIDA|64853|axin interactor, dorsalization associated##AK022868|AIDA|64853|axin interactor, dorsalization associated##BC171848|AIDA|64853|axin interactor, dorsalization associated##NM_022831|AIDA|64853|axin interactor, dorsalization associated##AK056983|BROX|148362|BRO1 domain and CAAX motif containing##NM_144695|BROX|148362|BRO1 domain and CAAX motif containing##BC113635|BROX|148362|BRO1 domain and CAAX motif containing##BC113637|BROX|148362|BRO1 domain and CAAX motif containing##BC143811|BROX|148362|BRO1 domain and CAAX motif containing	0.0	
chr15	89440765	89440884	reg1022639.p2	5.717	+	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	-2026	-	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	-94138	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	-258638	+	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	15736	-	BC003610 AK095908 AK222735 AK223182 AK304627 AK310357 AK312640 U58516 AY141974 TSC_hg19_v1_chr15_-_89456611 NM_001114614 NM_005928	15815	-	NM_007011 NM_152924	190556	+	AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan##BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein##BC003610|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK095908|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK222735|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK223182|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK304627|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK310357|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK312640|MFGE8|4240|milk fat globule-EGF factor 8 protein##U58516|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY141974|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_001114614|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_005928|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_007011|ABHD2|11057|abhydrolase domain containing 2##NM_152924|ABHD2|11057|abhydrolase domain containing 2	0.0	
chr5	32707627	32707806	reg1025172.p2	5.717	+	NM_006713 TSC_hg19_v1_chr5_+_32585676 AK294124 AK311754 BC022339 AK307268 BC009610 BC018189 BC071655 BC063402 BC010537 BC105972 AB209285	-122060	+	TSC_hg19_v1_chr5_-_32444845 AK292214 AK309638 BC017879 NM_016107	-262780	-	TSC_hg19_v1_chr5_-_32444820 BC107417 AJ314790 BC030540 BC137084 BC137085	-262938	-	NM_001204376 AK300094 AK308301	3034	+	AK290870 NM_000908 NM_001204375 M59305	3772	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	4089	+	NM_006713|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK294124|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK311754|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC022339|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK307268|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC009610|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC018189|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC071655|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC063402|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC010537|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC105972|SUB1|10923|SUB1 homolog (S. cerevisiae)##AB209285|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK292214|ZFR|51663|zinc finger RNA binding protein##AK309638|ZFR|51663|zinc finger RNA binding protein##BC017879|ZFR|51663|zinc finger RNA binding protein##NM_016107|ZFR|51663|zinc finger RNA binding protein##BC107417|ZFR|51663|zinc finger RNA binding protein##AJ314790|ZFR|51663|zinc finger RNA binding protein##BC030540|ZFR|51663|zinc finger RNA binding protein##BC137084|ZFR|51663|zinc finger RNA binding protein##BC137085|ZFR|51663|zinc finger RNA binding protein##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)	0.665811	CTCF.p2:-26:0.666
chr1	1609242	1609423	reg1026487.p1	5.716	+	BC054019 TSC_hg19_v1_chr1_-_1590434 BC104661 BC009375	-18879	-	AK297700 AB010962 AJ005256 NM_006983 BC025719 AB010961 AF056200	-41762	+	TSC_hg19_v1_chr1_+_1551275 NM_001170689 AK128167 BC035109 AK098785	-58032	+	TSC_hg19_v1_chr1_-_1623947 CR936618 BC062371	14633	-	BC092507 TSC_hg19_v1_chr1_-_1624149 AK125619	14826	-	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	14885	-	BC054019|CDK11A|728642|cyclin-dependent kinase 11A##BC104661|CDK11A|728642|cyclin-dependent kinase 11A##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AK297700|MMP23B|8510|matrix metallopeptidase 23B##AB010962|MMP23B|8510|matrix metallopeptidase 23B##AJ005256|MMP23B|8510|matrix metallopeptidase 23B##NM_006983|MMP23B|8510|matrix metallopeptidase 23B##BC025719|MMP23B|8510|matrix metallopeptidase 23B##AB010961|MMP23B|8510|matrix metallopeptidase 23B##AF056200|MMP23B|8510|matrix metallopeptidase 23B##NM_001170689|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK128167|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC035109|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK098785|MIB2|142678|mindbomb homolog 2 (Drosophila)##CR936618|SLC35E2B|728661|solute carrier family 35, member E2B##BC062371|SLC35E2|9906|solute carrier family 35, member E2##BC092507|SLC35E2B|728661|solute carrier family 35, member E2B##AK125619|SLC35E2B|728661|solute carrier family 35, member E2B##AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B	0.0	
chr12	75879173	75879254	reg1023846.p1	5.716	+	NM_006851 TSC_hg19_v1_chr12_+_75874534 AK304847 X91911 BC005227 U16307 BC012510 AF400440 AK313449 CU680346 AB529136 EF667354	-4627	+	TSC_hg19_v1_chr12_+_75784878 BX640916 BC029557 NM_152436 DQ891533 DQ894722	-94328	+	BC016749 AK093175 AX747973 TSC_hg19_v1_chr12_+_75784869	-94354	+	CU689792 DQ893552 DQ893553 DQ893554 DQ896515 EF010919 TSC_hg19_v1_chr12_-_75905381 AK297602 AK313687	26165	-	AK022133 TSC_hg19_v1_chr12_-_75905382 BC016778 U55766	26172	-	BC033887 TSC_hg19_v1_chr12_-_75905393 BC014034 BC026107	26182	-	NM_006851|GLIPR1|11010|GLI pathogenesis-related 1##AK304847|GLIPR1|11010|GLI pathogenesis-related 1##X91911|GLIPR1|11010|GLI pathogenesis-related 1##BC005227|GLIPR1|11010|GLI pathogenesis-related 1##U16307|GLIPR1|11010|GLI pathogenesis-related 1##BC012510|GLIPR1|11010|GLI pathogenesis-related 1##AF400440|GLIPR1|11010|GLI pathogenesis-related 1##AK313449|GLIPR1|11010|GLI pathogenesis-related 1##EF667354|GLIPR1|11010|GLI pathogenesis-related 1##BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ893552|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ893553|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ893554|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ896515|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##EF010919|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK297602|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK313687|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK022133|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC016778|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##U55766|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC033887|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC014034|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC026107|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)	0.971201	CTCF.p2:30:0.971
chr12	98926592	98926748	reg1024210.p1	5.716	+	TSC_hg19_v1_chr12_+_98909434 AK315221 U09086 S76736	-17228	+	TSC_hg19_v1_chr12_+_98909412 AB209297	-17259	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	-17263	+	TSC_hg19_v1_chr12_+_98987424 NM_002635 NM_005888 NM_213611 AK092689 BX647062	60743	+	AK074759 AK222658 AK316598 TSC_hg19_v1_chr12_+_98987463	60793	+	TSC_hg19_v1_chr12_+_98987497 BC001328 BC068067 BC006455 BC011641 X60036 BC051367 AB064666 BC004345 BC011574 BC000998 BC003504	60813	+	AK315221|TMPO|7112|thymopoietin##U09086|TMPO|7112|thymopoietin##S76736|TMPO|7112|thymopoietin##AB209297|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin##NM_002635|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##NM_005888|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##NM_213611|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AK092689|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BX647062|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AK074759|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AK222658|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AK316598|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC001328|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC068067|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC006455|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC011641|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##X60036|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC051367|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##AB064666|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC004345|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC011574|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC000998|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3##BC003504|SLC25A3|5250|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3	0.60538	CTCF.p2:6:0.605
chr17	48940867	48940976	reg1024487.p1	5.716	+	NM_175575	-28317	+	AF147357 TSC_hg19_v1_chr17_+_48821111	-119811	+	TSC_hg19_v1_chr17_+_48796963 NM_006107 NM_016424 AK290540 AK225980 AK023672 BC047043 BC056409 BC002925 AK295983 DQ013876 AK001925	-143928	+	TSC_hg19_v1_chr17_-_48943716 BC070493 BC098415 NM_001243885 NM_005749	2775	-	AK313904 NM_001243877	4417	-	TSC_hg19_v1_chr17_-_49124138 BC007524 BC059946 AK299553 AK307793 AK295098 AK309214 AK024068 NM_001251971	183307	-	NM_175575|WFIKKN2|124857|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2##AF147357|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_006107|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##NM_016424|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK290540|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK225980|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK023672|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC047043|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC056409|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC002925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK295983|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##DQ013876|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##AK001925|LUC7L3|51747|LUC7-like 3 (S. cerevisiae)##BC070493|TOB1|10140|transducer of ERBB2, 1##BC098415|TOB1|10140|transducer of ERBB2, 1##NM_001243885|TOB1|10140|transducer of ERBB2, 1##NM_005749|TOB1|10140|transducer of ERBB2, 1##AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1##BC007524|SPAG9|9043|sperm associated antigen 9##BC059946|SPAG9|9043|sperm associated antigen 9##AK299553|SPAG9|9043|sperm associated antigen 9##AK307793|SPAG9|9043|sperm associated antigen 9##AK295098|SPAG9|9043|sperm associated antigen 9##AK309214|SPAG9|9043|sperm associated antigen 9##AK024068|SPAG9|9043|sperm associated antigen 9##NM_001251971|SPAG9|9043|sperm associated antigen 9	0.039758	
chr19	18518931	18519111	reg1007393.p1	5.716	+	BC025744 TSC_hg19_v1_chr19_-_18508433 NM_145256 BC053659 BC033825	-10601	-	TSC_hg19_v1_chr19_+_18496967 AB000584 AK225425 AK225431 AK291530 NM_004864 BC008962 U88323 BC000529 AF019770 U51731 BT019465	-22039	+	TSC_hg19_v1_chr19_+_18451449 AK289968 NM_017712 AK294497 BC042138 BC028063 AJ278828 AK000215	-67614	+	TSC_hg19_v1_chr19_+_18530163 NM_001009998 NM_032627	11106	+	TSC_hg19_v1_chr19_+_18530224 BC000274 AK098429	11204	+	TSC_hg19_v1_chr19_+_18530425 CU674122 AB464208	11419	+	BC025744|LRRC25|126364|leucine rich repeat containing 25##NM_145256|LRRC25|126364|leucine rich repeat containing 25##BC053659|LRRC25|126364|leucine rich repeat containing 25##BC033825|LRRC25|126364|leucine rich repeat containing 25##AB000584|GDF15|9518|growth differentiation factor 15##AK225431|GDF15|9518|growth differentiation factor 15##AK291530|GDF15|9518|growth differentiation factor 15##NM_004864|GDF15|9518|growth differentiation factor 15##BC008962|GDF15|9518|growth differentiation factor 15##U88323|GDF15|9518|growth differentiation factor 15##BC000529|GDF15|9518|growth differentiation factor 15##AF019770|GDF15|9518|growth differentiation factor 15##U51731|GDF15|9518|growth differentiation factor 15##BT019465|GDF15|9518|growth differentiation factor 15##AK289968|PGPEP1|54858|pyroglutamyl-peptidase I##NM_017712|PGPEP1|54858|pyroglutamyl-peptidase I##AK294497|PGPEP1|54858|pyroglutamyl-peptidase I##BC042138|PGPEP1|54858|pyroglutamyl-peptidase I##BC028063|PGPEP1|54858|pyroglutamyl-peptidase I##AJ278828|PGPEP1|54858|pyroglutamyl-peptidase I##AK000215|PGPEP1|54858|pyroglutamyl-peptidase I##NM_001009998|SSBP4|170463|single stranded DNA binding protein 4##NM_032627|SSBP4|170463|single stranded DNA binding protein 4##BC000274|SSBP4|170463|single stranded DNA binding protein 4##AK098429|SSBP4|170463|single stranded DNA binding protein 4	0.0	
chr3	4887565	4887710	reg1024665.p1	5.716	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-352441	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-352509	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-352606	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	133479	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	133544	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	133717	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.0	
chr1	19977761	19977861	reg1022108.p1	5.715	+	AK309257 NM_001204086	-5552	+	AK313265 NM_001204085	-5946	+	TSC_hg19_v1_chr1_+_19970804 NM_005380 BC012037 D28124	-7024	+	L41147 NM_000871	13968	+	TSC_hg19_v1_chr1_-_20126374 BX640987 NM_181719	148599	-	CR457228 BC051880 BC030960 AK000232 AK222991 NM_019062	163870	-	AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_005380|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##BC012037|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##D28124|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##L41147|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##NM_000871|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4##NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4##CR457228|RNF186|54546|ring finger protein 186##BC051880|RNF186|54546|ring finger protein 186##BC030960|RNF186|54546|ring finger protein 186##AK000232|RNF186|54546|ring finger protein 186##AK222991|RNF186|54546|ring finger protein 186##NM_019062|RNF186|54546|ring finger protein 186	0.0	
chr12	48212995	48213109	reg1023656.p2	5.715	+	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-46018	+	AK092448 NM_001098531	-60178	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	-60643	-	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	612	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	85749	-	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	144286	+	NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C	0.0	
chr16	23875168	23875349	reg1024095.p2	5.715	+	AB587511 EU832791 GQ129253 TSC_hg19_v1_chr16_+_23847512	-27752	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	-27863	+	TSC_hg19_v1_chr16_+_23847321 BC036472	-27926	+	BC037899 NM_006539 AK095553	391616	+	AK055453 TSC_hg19_v1_chr16_+_24267474	392216	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	392440	+	EU832791|PRKCB|5579|protein kinase C, beta##GQ129253|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	0.0	
chr6	135466474	135466654	reg1002293.p2	5.715	+	TSC_hg19_v1_chr6_-_135375958 AK024258 AK295545 AF161394 U87791 AJ459826 AJ459827 NM_001145158 NM_001145207 NM_006620	-90570	-	CU674720 EU831981 EU832074 TSC_hg19_v1_chr6_-_135375948 BC040849 AJ420551 BC001465	-90676	-	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	-195332	-	TSC_hg19_v1_chr6_+_135502445 AJ606317 AJ606318 AJ606319 AJ606320 AJ606321 AJ606322 AJ606323 AJ606324 NM_001130172 NM_001130173 NM_001161656 NM_001161657 NM_001161658 NM_001161659 NM_001161660 NM_005375 X52125	35884	+	TSC_hg19_v1_chr6_+_135502507 BC064955	35931	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	36022	+	AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)##AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)##AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)##U87791|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)##EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)##EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)##BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)##BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	0.0	
chr11	83232844	83232946	reg1024208.p2	5.714	+	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	-235490	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	-235862	-	BX648690 NM_182603 DQ508815 AK095193 BC171752	-327407	+	AK299778 CR933674 NM_001142702	160556	-	AK294375 AK126776 AK295624 NM_001142700	751381	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	795486	-	AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##BX648690|ANKRD42|338699|ankyrin repeat domain 42##NM_182603|ANKRD42|338699|ankyrin repeat domain 42##DQ508815|ANKRD42|338699|ankyrin repeat domain 42##AK095193|ANKRD42|338699|ankyrin repeat domain 42##BC171752|ANKRD42|338699|ankyrin repeat domain 42##AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)	0.0	
chr2	86116491	86116595	reg1012699.p2	5.714	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-457	-	AY152815 NM_001042437	-21751	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-135538	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	216440	-	NM_015425	216734	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	216798	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.0	
chrX	74001725	74001824	reg1023294.p2	5.714	+	NM_016120 NM_183353 TSC_hg19_v1_chrX_-_73834460	-167310	-	TSC_hg19_v1_chrX_-_73834444 AK001334	-167335	-	BC002451 TSC_hg19_v1_chrX_-_73834428	-167346	-	AK307471 NM_001008537 AB095942 BC152557	143525	-	TSC_hg19_v1_chrX_-_74376076 AF078777 AK307414 AF133659 BT009918 CU675349 DQ890692 EU176476 BC006323 AF038950 BX537833 AK294657 AK001418 NM_004299	374329	-	NM_145052 TSC_hg19_v1_chrX_+_74493908 AY643714 AK309951 AK056354 BC015116 CR749336 AK293024	492184	+	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting##NM_183353|RLIM|51132|ring finger protein, LIM domain interacting##AK001334|RLIM|51132|ring finger protein, LIM domain interacting##AK307471|KIAA2022|340533|KIAA2022##NM_001008537|KIAA2022|340533|KIAA2022##AB095942|KIAA2022|340533|KIAA2022##BC152557|KIAA2022|340533|KIAA2022##AF078777|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK307414|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AF133659|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BT009918|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##DQ890692|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##EU176476|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BC006323|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AF038950|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BX537833|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK294657|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK001418|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##NM_004299|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##NM_145052|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AY643714|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK309951|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK056354|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##BC015116|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##CR749336|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK293024|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)	0.0	
chr1	160078845	160078961	reg1024539.p2	5.713	+	AK308115 NM_001206665 TSC_hg19_v1_chr1_-_160068754	-10215	-	TSC_hg19_v1_chr1_-_160068411 AF407274 AK055843 BC053881 NM_052868	-10488	-	AB590475 TSC_hg19_v1_chr1_-_160068277 AY157579 AF311906 AY044845	-10606	-	NM_000702 AK124581 AK091617 AK225127 AK295048 AK314296 TSC_hg19_v1_chr1_+_160085548 BC047533 AB018321 BC052271	6640	+	NM_144699 AF506797 BC068570 BC036052 BX647234 AL833335 AK308286 BC094801	42472	+	BC028297 NM_001001734	68297	+	AK308115|IGSF8|93185|immunoglobulin superfamily, member 8##NM_001206665|IGSF8|93185|immunoglobulin superfamily, member 8##AF407274|IGSF8|93185|immunoglobulin superfamily, member 8##AK055843|IGSF8|93185|immunoglobulin superfamily, member 8##BC053881|IGSF8|93185|immunoglobulin superfamily, member 8##NM_052868|IGSF8|93185|immunoglobulin superfamily, member 8##AY157579|IGSF8|93185|immunoglobulin superfamily, member 8##AF311906|IGSF8|93185|immunoglobulin superfamily, member 8##AY044845|IGSF8|93185|immunoglobulin superfamily, member 8##NM_000702|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK124581|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK091617|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK295048|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK314296|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##BC047533|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AB018321|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##BC052271|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##NM_144699|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AF506797|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC068570|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC036052|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BX647234|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AL833335|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AK308286|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC094801|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC028297|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##NM_001001734|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide	0.905121	CTCF.p2:10:0.905
chr1	235667953	235668113	reg1025238.p1	5.713	+	BC029564 NM_152490 TSC_hg19_v1_chr1_-_235667782	-252	-	TSC_hg19_v1_chr1_-_235667723 BC016974 AK130297	-300	-	TSC_hg19_v1_chr1_-_235667473 AK091497	-524	-	TSC_hg19_v1_chr1_-_235813301 AK311781 NM_001098722	145149	-	BC022485 NM_001098721 NM_004485	146020	-	TSC_hg19_v1_chr1_-_236030193 BC020793	362150	-	BC029564|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_152490|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##BC016974|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##AK130297|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##AK091497|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##AK311781|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098722|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4	0.0	
chr14	67604614	67604728	reg1025915.p2	5.713	+	AJ272343 TSC_hg19_v1_chr14_+_66975224 AK294532 AK297447 BC030016 DQ892463 DQ895675 AB385462 AJ272033	-629446	+	TSC_hg19_v1_chr14_+_66974870 AK315569	-629802	+	TSC_hg19_v1_chr14_+_66974859 AK025169	-629818	+	NM_173526 AK093449 AX748134 AK302154 BC037380 BC050401	51472	+	BC095485 TSC_hg19_v1_chr14_+_67708117 NM_022474 AK291240 AK098373 BC053366 AL832326 BC129933 AL832578 BC037966 AK057160	103492	+	CU692980 TSC_hg19_v1_chr14_-_67826522 BC001411 AF104629 BC031002 AK315784 AK001155 AF145316 AF077614 AF100741 BC025373 NM_015994	221895	-	AJ272343|GPHN|10243|gephyrin##AK294532|GPHN|10243|gephyrin##AK297447|GPHN|10243|gephyrin##BC030016|GPHN|10243|gephyrin##DQ892463|GPHN|10243|gephyrin##DQ895675|GPHN|10243|gephyrin##AJ272033|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##NM_173526|FAM71D|161142|family with sequence similarity 71, member D##AK093449|FAM71D|161142|family with sequence similarity 71, member D##AK302154|FAM71D|161142|family with sequence similarity 71, member D##BC037380|FAM71D|161142|family with sequence similarity 71, member D##BC050401|FAM71D|161142|family with sequence similarity 71, member D##BC095485|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##NM_022474|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK291240|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK098373|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC053366|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832326|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC129933|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832578|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC037966|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	0.0	
chr16	66309868	66309965	reg1025910.p1	5.713	+	TSC_hg19_v1_chr16_-_65155987 AK297377	-1153922	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	-1153948	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	-1154014	-	NM_001795 TSC_hg19_v1_chr16_+_66400538	90617	+	TSC_hg19_v1_chr16_+_66400559 U84722	90644	+	AK300461 TSC_hg19_v1_chr16_+_66400593 X59796 AK300299 AB209908 AB035304 BC096363 BC096364 BC096365 BC117520	90686	+	AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	0.010772	
chr3	13541756	13541852	reg1026711.p1	5.713	+	NM_024827 TSC_hg19_v1_chr3_+_13521806 AK299021 AK025426 AK025890 BC009676 NM_001136041 AK293223	-19992	+	TSC_hg19_v1_chr3_-_13461832 BC020573 NM_024923	-79987	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	-80072	-	AK129883 NM_001004019 NM_001998 TSC_hg19_v1_chr3_+_13590624	48821	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	48859	+	AK304827 NM_001165035	68435	+	NM_024827|HDAC11|79885|histone deacetylase 11##AK299021|HDAC11|79885|histone deacetylase 11##AK025426|HDAC11|79885|histone deacetylase 11##AK025890|HDAC11|79885|histone deacetylase 11##BC009676|HDAC11|79885|histone deacetylase 11##NM_001136041|HDAC11|79885|histone deacetylase 11##AK293223|HDAC11|79885|histone deacetylase 11##BC020573|NUP210|23225|nucleoporin 210kDa##NM_024923|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa##AK129883|FBLN2|2199|fibulin 2##NM_001004019|FBLN2|2199|fibulin 2##NM_001998|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2##AK304827|FBLN2|2199|fibulin 2##NM_001165035|FBLN2|2199|fibulin 2	0.996704	CTCF.p2:11:0.997
chr10	76649243	76649386	reg1024881.p1	5.712	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-62960	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-712727	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-712784	+	AY686755 NM_001003892 BC137321 BC137322	168991	-	AB027004 AB103375 NM_016364	209933	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	219600	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.941153	CTCF.p2:1:0.941
chr10	89976855	89977019	reg1026318.p1	5.712	+	TSC_hg19_v1_chr10_+_89623420 U96180	-353510	+	TSC_hg19_v1_chr10_+_89623380 BC005821	-353548	+	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	-353711	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	366077	-	BC042900 BC031219 NM_001010939	369576	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	447243	+	U96180|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric	0.102894	
chr1	206976810	206976990	reg1021155.p2	5.712	+	AY040367 NM_153758 AB463800	-4674	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-31021	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-118429	+	AF453946 NM_013371	25321	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	62275	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	93900	+	AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24	0.0	
chr5	101786107	101786212	reg1024570.p2	5.712	+	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	-154051	-	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-1547231	-	AF529367 TSC_hg19_v1_chr5_+_99871306	-1914889	+	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	48474	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	415371	+	M37721 TSC_hg19_v1_chr5_+_102201730 AK296521 AK290158 S75037 S75038 AB527419 AB095007 BT007419	415647	+	AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF529367|FAM174A|345757|family with sequence similarity 174, member A##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase##M37721|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK296521|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK290158|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75037|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75038|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AB095007|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BT007419|PAM|5066|peptidylglycine alpha-amidating monooxygenase	0.851096	CTCF.p2:-18:0.851
chr5	72114918	72115020	reg1023162.p2	5.712	+	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	-2479	+	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	-311786	-	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-498747	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	28972	+	TSC_hg19_v1_chr5_+_72143999 U72395 U72069	29038	+	TSC_hg19_v1_chr5_+_72251813 BC137070 NM_001146032 NM_138782	136816	+	NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##NM_153188|TNPO1|3842|transportin 1##U72395|TNPO1|3842|transportin 1##U72069|TNPO1|3842|transportin 1##BC137070|FCHO2|115548|FCH domain only 2##NM_001146032|FCHO2|115548|FCH domain only 2##NM_138782|FCHO2|115548|FCH domain only 2	0.0	
chr9	35616932	35617046	reg1023785.p1	5.712	+	DQ893327 DQ896643 BC037561 AK298907 TSC_hg19_v1_chr9_+_35605808	-11278	+	TSC_hg19_v1_chr9_+_35605468 BC011799	-11505	+	TSC_hg19_v1_chr9_+_35605339 D50863	-11629	+	CU688854 BC011734 BC030227 AK309268 AK307305 AK310093 AK310685 M54992 AF283777 NM_001782	1372	-	TSC_hg19_v1_chr9_-_35646809 DQ174771 AK311283	29838	-	AB527705 TSC_hg19_v1_chr9_-_35650929 AK314758 AJ010059 BC102029 BC104491 BC107484 NM_014450	33910	-	DQ893327|TESK1|7016|testis-specific kinase 1##DQ896643|TESK1|7016|testis-specific kinase 1##BC037561|TESK1|7016|testis-specific kinase 1##AK298907|TESK1|7016|testis-specific kinase 1##BC011799|TESK1|7016|testis-specific kinase 1##D50863|TESK1|7016|testis-specific kinase 1##BC011734|CD72|971|CD72 molecule##BC030227|CD72|971|CD72 molecule##AK309268|CD72|971|CD72 molecule##AK307305|CD72|971|CD72 molecule##AK310093|CD72|971|CD72 molecule##AK310685|CD72|971|CD72 molecule##M54992|CD72|971|CD72 molecule##AF283777|CD72|971|CD72 molecule##NM_001782|CD72|971|CD72 molecule##DQ174771|CD72|971|CD72 molecule##AK311283|CD72|971|CD72 molecule##AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	0.185257	
chr13	92598848	92598953	reg1021604.p1	5.711	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-547996	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-4274031	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-6225461	-	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1280527	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	2532926	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	2649529	-	BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase	0.839188	CTCF.p2:23:0.839
chr16	63323891	63324003	reg1025599.p2	5.711	+	AK124734 NM_001796	-1253209	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-4555750	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-4605291	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	1831955	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	1832021	-	TSC_hg19_v1_chr16_-_65155987 AK297377	1832047	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.901551	CTCF.p2:1:0.902
chr2	56359438	56359550	reg1025694.p1	5.711	+	AK293058 NM_001039348 NM_001039349	-208209	-	TSC_hg19_v1_chr2_-_56150918 AK301531 BC014410 BC098561 AK301402 AK312639 AK092854 AK290599 AX747769	-208579	-	TSC_hg19_v1_chr2_-_55920980 BC053660 BC009057 AK027437 AY027528 AK307589 AJ458465 NM_033109	-438516	-	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	51711	+	AB384323 TSC_hg19_v1_chr2_+_56411776	52272	+	AK311113 TSC_hg19_v1_chr2_-_56412914	53415	-	AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301531|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC014410|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC098561|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301402|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK312639|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK092854|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK290599|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC053660|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##BC009057|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AY027528|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AK307589|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AJ458465|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##NM_033109|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK311113|LOC100129434|100129434|uncharacterized LOC100129434	0.99556	CTCF.p2:2:0.996
chr3	113464081	113464192	reg1021119.p1	5.711	+	TSC_hg19_v1_chr3_-_113415490 BC043383 NM_001009899	-48724	-	NM_017699	-212919	+	AY099107 BC036951 TSC_hg19_v1_chr3_-_113234023 AK057966 AL832327 AL832148 NM_144718	-230143	-	AK296456 TSC_hg19_v1_chr3_-_113464788	578	-	TSC_hg19_v1_chr3_-_113465043 CR749314 AK023090 AK307184 BC012731 AK311403 AK023256	907	-	TSC_hg19_v1_chr3_-_113465109 NM_025146	997	-	BC043383|KIAA2018|205717|KIAA2018##NM_001009899|KIAA2018|205717|KIAA2018##NM_017699|SIDT1|54847|SID1 transmembrane family, member 1##AY099107|SPICE1|152185|spindle and centriole associated protein 1##BC036951|SPICE1|152185|spindle and centriole associated protein 1##AK057966|SPICE1|152185|spindle and centriole associated protein 1##AL832327|SPICE1|152185|spindle and centriole associated protein 1##AL832148|SPICE1|152185|spindle and centriole associated protein 1##NM_144718|SPICE1|152185|spindle and centriole associated protein 1##AK296456|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##CR749314|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK023090|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK307184|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##BC012731|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK023256|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##NM_025146|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit	0.500356	CTCF.p2:26:0.500
chr6	164527638	164527769	reg1020654.p2	5.711	+	AL050218 TSC_hg19_v1_chr6_+_163984651	-543090	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	-691471	+	TSC_hg19_v1_chr6_+_163835795 AF272349	-691913	+	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	1195389	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	1547993	-	AY203946 TSC_hg19_v1_chr6_-_166076051	1548349	-	AL050218|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##AY203946|LOC100132188|100132188|LP7097	0.962157	CTCF.p2:6:0.962
chr7	142172246	142172352	reg1023580.p1	5.711	+	AY358487 BC035384 AK122940 NM_001001317	-214438	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-360760	+	AF016833 NM_004668 BC120872	-476607	+	NM_001190487	201831	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	285027	+	M12426 TSC_hg19_v1_chr7_+_142495248	322896	+	AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	0.999723	CTCF.p2:8:1.000
chr8	37593928	37594047	reg1024735.p1	5.711	+	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	-40670	+	TSC_hg19_v1_chr8_-_37457377 AK025743	-136619	-	NM_001031836 AK302391 BC028701	-952117	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	119	+	TSC_hg19_v1_chr8_+_37594151 BC050611 AK291394 AK297279 AY358108	157	+	TSC_hg19_v1_chr8_+_37594155 AY358851	174	+	AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##AK025743|LOC157860|157860|uncharacterized LOC157860##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2##BC050611|ERLIN2|11160|ER lipid raft associated 2##AK291394|ERLIN2|11160|ER lipid raft associated 2##AK297279|ERLIN2|11160|ER lipid raft associated 2##AY358108|ERLIN2|11160|ER lipid raft associated 2##AY358851|ERLIN2|11160|ER lipid raft associated 2	0.019611	
chr9	12884877	12885040	reg1024246.p1	5.711	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	-109177	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	-109942	+	NM_000550 X51420 BC052608	-191533	+	AB384682 AF093419 BC140793 BC144564 NM_003829	365380	-	AB210041 TSC_hg19_v1_chr9_-_13279602	394624	-	BX537698 TSC_hg19_v1_chr9_-_14087002	1201994	-	HQ257895|C9orf150|286343|chromosome 9 open reading frame 150##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##AF093419|MPDZ|8777|multiple PDZ domain protein##BC140793|MPDZ|8777|multiple PDZ domain protein##BC144564|MPDZ|8777|multiple PDZ domain protein##NM_003829|MPDZ|8777|multiple PDZ domain protein##AB210041|MPDZ|8777|multiple PDZ domain protein##BX537698|NFIB|4781|nuclear factor I/B	0.812527	CTCF.p2:7:0.813
chr12	94542896	94542987	reg1037737.p2	5.710	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	-437	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-471758	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-577340	-	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	310590	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	310701	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	310791	-	AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41	0.0	
chr14	74926391	74926514	reg1025670.p1	5.710	+	NM_001105579	-33648	-	BC053325 AK023213 TSC_hg19_v1_chr14_+_74815209 AK001673	-111250	+	NM_018228 TSC_hg19_v1_chr14_+_74815173	-111283	+	CU678022 DQ891907 DQ895093 X67698 AK298975 TSC_hg19_v1_chr14_-_74959988	33534	-	AK222474 TSC_hg19_v1_chr14_-_74960013 AK300879	33562	-	TSC_hg19_v1_chr14_-_74960037 AK311931 BC002532 NM_006432	33607	-	NM_001105579|SYNDIG1L|646658|synapse differentiation inducing 1-like##BC053325|VRTN|55237|vertebrae development homolog (pig)##AK023213|VRTN|55237|vertebrae development homolog (pig)##AK001673|VRTN|55237|vertebrae development homolog (pig)##NM_018228|VRTN|55237|vertebrae development homolog (pig)##DQ891907|NPC2|10577|Niemann-Pick disease, type C2##DQ895093|NPC2|10577|Niemann-Pick disease, type C2##X67698|NPC2|10577|Niemann-Pick disease, type C2##AK298975|NPC2|10577|Niemann-Pick disease, type C2##AK222474|NPC2|10577|Niemann-Pick disease, type C2##AK300879|NPC2|10577|Niemann-Pick disease, type C2##AK311931|NPC2|10577|Niemann-Pick disease, type C2##BC002532|NPC2|10577|Niemann-Pick disease, type C2##NM_006432|NPC2|10577|Niemann-Pick disease, type C2	0.947845	CTCF.p2:8:0.948
chr1	79725569	79725669	reg1021071.p1	5.710	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-253192	-	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-610121	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	-639488	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	2046308	+	AF104266 AF104938 AF104939 NM_012302	2540462	+	AK097722 TSC_hg19_v1_chr1_-_84326308	4600649	-	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.0	
chr19	35632358	35632458	reg1023166.p1	5.710	+	NM_005031	-2017	+	AK289811 TSC_hg19_v1_chr19_+_35629727 NM_021902	-2679	+	TSC_hg19_v1_chr19_-_35625994 AJ487519 BC140008 NM_139284	-6325	-	BC029943 TSC_hg19_v1_chr19_-_35633495	1017	-	NM_022006 TSC_hg19_v1_chr19_+_35634167 AK296405 BC018619 AK057825 DQ892489 DQ895700 AB528536	1786	+	TSC_hg19_v1_chr19_+_35645637 NM_014164 AK304012	13218	+	NM_005031|FXYD1|5348|FXYD domain containing ion transport regulator 1##AK289811|FXYD1|5348|FXYD domain containing ion transport regulator 1##NM_021902|FXYD1|5348|FXYD domain containing ion transport regulator 1##AJ487519|LGI4|163175|leucine-rich repeat LGI family, member 4##BC140008|LGI4|163175|leucine-rich repeat LGI family, member 4##NM_139284|LGI4|163175|leucine-rich repeat LGI family, member 4##BC029943|LGI4|163175|leucine-rich repeat LGI family, member 4##NM_022006|FXYD7|53822|FXYD domain containing ion transport regulator 7##BC018619|FXYD7|53822|FXYD domain containing ion transport regulator 7##AK057825|FXYD7|53822|FXYD domain containing ion transport regulator 7##DQ892489|FXYD7|53822|FXYD domain containing ion transport regulator 7##DQ895700|FXYD7|53822|FXYD domain containing ion transport regulator 7##NM_014164|FXYD5|53827|FXYD domain containing ion transport regulator 5##AK304012|FXYD5|53827|FXYD domain containing ion transport regulator 5	0.0	
chr18	46311699	46311857	reg1022827.p2	5.709	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-246005	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-376069	-	AM988836 AK296709 NM_001039360 EF120357	-648079	-	AK131394 NM_001190823	157369	-	AK301535 NM_001190822	163924	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	164989	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.0	
chr8	141467827	141468001	reg1025764.p1	5.709	+	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	-56	-	AB067469 TSC_hg19_v1_chr8_-_141467841	-89	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	-752632	-	AK128755 NM_031466	763	-	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	53478	+	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	53649	+	AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AK128755|TRAPPC9|83696|trafficking protein particle complex 9##NM_031466|TRAPPC9|83696|trafficking protein particle complex 9##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1	0.031293	
chr8	58094875	58094985	reg1021648.p1	5.709	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-188504	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-188528	-	TSC_hg19_v1_chr8_-_57906381 BC017797	-188552	-	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	812227	+	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	1228955	+	X56088 M93133 BC101777 BC112184 NM_000780	1317777	-	AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	0.57926	CTCF.p2:-2:0.579
chr1	1280123	1280249	reg1025364.p2	5.708	+	AB527345 NM_152228	-13463	+	TSC_hg19_v1_chr1_+_1260306 BC010742	-19889	+	NM_001029885 TSC_hg19_v1_chr1_+_1260181	-20022	+	AK293286 CU690690 AF006011 AB385564 BC025292 NM_004421 BC050454 TSC_hg19_v1_chr1_-_1284533	4229	-	TSC_hg19_v1_chr1_-_1284799 AK095867	4597	-	TSC_hg19_v1_chr1_-_1293914 AK304615 AK225028 BC006213 BC017312 NM_032348 AY358391 AK027269 AK293442 AK315510	13739	-	NM_152228|TAS1R3|83756|taste receptor, type 1, member 3##NM_001029885|GLTPD1|80772|glycolipid transfer protein domain containing 1##AK293286|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##AF006011|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##BC025292|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##NM_004421|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##BC050454|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##AK095867|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##AK304615|MXRA8|54587|matrix-remodelling associated 8##AK225028|MXRA8|54587|matrix-remodelling associated 8##BC006213|MXRA8|54587|matrix-remodelling associated 8##BC017312|MXRA8|54587|matrix-remodelling associated 8##NM_032348|MXRA8|54587|matrix-remodelling associated 8##AY358391|MXRA8|54587|matrix-remodelling associated 8##AK027269|MXRA8|54587|matrix-remodelling associated 8##AK293442|MXRA8|54587|matrix-remodelling associated 8##AK315510|MXRA8|54587|matrix-remodelling associated 8	0.064954	
chr1	196712506	196712666	reg1026637.p1	5.708	+	NM_000186 NM_001014975 TSC_hg19_v1_chr1_+_196621172 AK291395 AK225649 X07523 Y00716 BC037285 BC012610 BC110643 BC073982 BC142699 CU691466	-91459	+	TSC_hg19_v1_chr1_-_196577676 AK131498	-134904	-	EU251076 BC103947 BC103948 BC103949 BC103950 AY359444 NM_198503 BX647852 AK309729 TSC_hg19_v1_chr1_-_196577612	-135061	-	BC029390 NM_001166624 NM_021023 BC070259 AK298459 BC020680 BC020687 BC058009 X68679 CU676644 CU687072 CU691286	31386	+	NM_002113 BC107771 AK311681 AK290830 BC016755 M65292 M65293 X56210 AB590260 DQ892762 DQ896007 X56209	76335	+	AK292752 NM_001201550 NM_001201551 NM_006684 X98337 AJ640130 BC074957	144601	+	NM_000186|CFH|3075|complement factor H##NM_001014975|CFH|3075|complement factor H##AK291395|CFH|3075|complement factor H##AK225649|CFH|3075|complement factor H##X07523|CFH|3075|complement factor H##Y00716|CFH|3075|complement factor H##BC037285|CFH|3075|complement factor H##BC012610|CFH|3075|complement factor H##BC110643|CFH|3075|complement factor H##BC073982|CFH|3075|complement factor H##BC142699|CFH|3075|complement factor H##AK131498|KCNT2|343450|potassium channel, subfamily T, member 2##EU251076|KCNT2|343450|potassium channel, subfamily T, member 2##BC103947|KCNT2|343450|potassium channel, subfamily T, member 2##BC103948|KCNT2|343450|potassium channel, subfamily T, member 2##BC103949|KCNT2|343450|potassium channel, subfamily T, member 2##BC103950|KCNT2|343450|potassium channel, subfamily T, member 2##AY359444|KCNT2|343450|potassium channel, subfamily T, member 2##NM_198503|KCNT2|343450|potassium channel, subfamily T, member 2##BX647852|KCNT2|343450|potassium channel, subfamily T, member 2##AK309729|KCNT2|343450|potassium channel, subfamily T, member 2##NM_001166624|CFHR3|10878|complement factor H-related 3##NM_021023|CFHR3|10878|complement factor H-related 3##BC070259|CFHR3|10878|complement factor H-related 3##AK298459|CFHR3|10878|complement factor H-related 3##BC020680|CFHR3|10878|complement factor H-related 3##BC020687|CFHR3|10878|complement factor H-related 3##BC058009|CFHR3|10878|complement factor H-related 3##X68679|CFHR3|10878|complement factor H-related 3##NM_002113|CFHR1|3078|complement factor H-related 1##BC107771|CFHR1|3078|complement factor H-related 1##AK290830|CFHR1|3078|complement factor H-related 1##BC016755|CFHR1|3078|complement factor H-related 1##M65292|CFHR1|3078|complement factor H-related 1##M65293|CFHR1|3078|complement factor H-related 1##X56210|CFHR1|3078|complement factor H-related 1##DQ892762|CFHR1|3078|complement factor H-related 1##DQ896007|CFHR1|3078|complement factor H-related 1##X56209|CFHR1|3078|complement factor H-related 1##AK292752|CFHR4|10877|complement factor H-related 4##NM_001201550|CFHR4|10877|complement factor H-related 4##NM_001201551|CFHR4|10877|complement factor H-related 4##NM_006684|CFHR4|10877|complement factor H-related 4##X98337|CFHR4|10877|complement factor H-related 4##AJ640130|CFHR4|10877|complement factor H-related 4##BC074957|CFHR4|10877|complement factor H-related 4	0.958849	CTCF.p2:-34:0.959
chr17	1074186	1074300	reg1024419.p1	5.708	+	TSC_hg19_v1_chr17_-_1029059 AK307827	-45169	-	AK295191 TSC_hg19_v1_chr17_-_1012323 NM_001092 BC036807	-61934	-	TSC_hg19_v1_chr17_-_982210 AK299909	-92018	-	AK302682 AB384846 TSC_hg19_v1_chr17_-_1083048 NM_021962 U01147	8826	-	TSC_hg19_v1_chr17_-_1090565 AK126882 AK124547 NM_001159746	16345	-	NM_001164405	99614	+	AK307827|ABR|29|active BCR-related gene##AK295191|ABR|29|active BCR-related gene##NM_001092|ABR|29|active BCR-related gene##BC036807|ABR|29|active BCR-related gene##AK299909|ABR|29|active BCR-related gene##AK302682|ABR|29|active BCR-related gene##NM_021962|ABR|29|active BCR-related gene##U01147|ABR|29|active BCR-related gene##AK126882|ABR|29|active BCR-related gene##AK124547|ABR|29|active BCR-related gene##NM_001159746|ABR|29|active BCR-related gene##NM_001164405|BHLHA9|727857|basic helix-loop-helix family, member a9	0.67795	CTCF.p2:-19:0.678
chr17	70653948	70654067	reg1024736.p1	5.708	+	AK000477 TSC_hg19_v1_chr17_-_70588944	-65064	-	TSC_hg19_v1_chr17_+_70117187 BC007951	-536767	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-536837	+	AF331643 TSC_hg19_v1_chr17_-_71088816	434809	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	434816	-	BC035631 TSC_hg19_v1_chr17_-_71088831	434824	-	AK000477|LOC100499467|100499467|uncharacterized LOC100499467##BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.644246	CTCF.p2:22:0.644
chr2	204774524	204774646	reg1026024.p1	5.708	+	BC070162 AF414120 NM_001037631 NM_005214 AK313732 BC069566 BC074893 BC074842 AB590653 AF486806 AY209009 AY792514 AY999702 DQ785106 L15006	-41998	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	-203186	+	NM_001243077 NM_001243078 NM_006139 AJ517504 AK313313 J02988 TSC_hg19_v1_chr2_+_204571361 AK303421	-203305	+	AK314985 AJ277832 NM_012092 BC028006 BC028210 AB023135 AF218312 CU688368 CU688430	26909	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	635905	+	TSC_hg19_v1_chr2_+_205410560 AX765687 AX765741 AK056157	636009	+	BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule##NM_001243077|CD28|940|CD28 molecule##NM_001243078|CD28|940|CD28 molecule##NM_006139|CD28|940|CD28 molecule##AJ517504|CD28|940|CD28 molecule##AK313313|CD28|940|CD28 molecule##J02988|CD28|940|CD28 molecule##AK303421|CD28|940|CD28 molecule##AK314985|ICOS|29851|inducible T-cell co-stimulator##AJ277832|ICOS|29851|inducible T-cell co-stimulator##NM_012092|ICOS|29851|inducible T-cell co-stimulator##BC028006|ICOS|29851|inducible T-cell co-stimulator##BC028210|ICOS|29851|inducible T-cell co-stimulator##AB023135|ICOS|29851|inducible T-cell co-stimulator##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK056157|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)	0.866928	CTCF.p2:3:0.867
chr2	242027497	242027586	reg1022371.p1	5.708	+	NM_001080437	-89287	+	AK056601 NM_001085437	-191969	-	BC125154 BC125155 AK026324 NM_024861 AK096434	-196122	-	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	14185	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	61330	-	AK308015 BC051689 TSC_hg19_v1_chr2_+_242089094	61517	+	NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54##BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase##AK308015|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC051689|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7	0.0	
chr6	118585231	118585323	reg1021629.p1	5.708	+	BC028615 NM_001029858 BC114925	-356587	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-588611	+	BC110325 TSC_hg19_v1_chr6_+_117996661 BC063794	-588616	+	NM_002667 M63603 AK311799 BC005269	284188	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	387759	-	BC110835 BC064835 NM_001178035	445956	-	BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC110325|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC063794|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like	0.072802	
chr15	52509461	52509581	reg1026256.p1	5.707	+	NM_016194	-25957	-	TSC_hg19_v1_chr15_+_52472257 AF007131	-37186	+	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	-37380	-	AF161352 TSC_hg19_v1_chr15_-_52529707	20185	-	AF272390 BC144611 BC064841 TSC_hg19_v1_chr15_-_52587968 AK301079 AK304136 NM_018728	78413	-	TSC_hg19_v1_chr15_-_52821078 AB290180 AK303660 AK307600 NM_000259 NM_001142495 U90942 Y07759	311735	-	NM_016194|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF161352|MYO5C|55930|myosin VC##AF272390|MYO5C|55930|myosin VC##BC144611|MYO5C|55930|myosin VC##BC064841|MYO5C|55930|myosin VC##AK301079|MYO5C|55930|myosin VC##AK304136|MYO5C|55930|myosin VC##NM_018728|MYO5C|55930|myosin VC##AB290180|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK303660|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK307600|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_000259|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_001142495|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##U90942|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##Y07759|MYO5A|4644|myosin VA (heavy chain 12, myoxin)	0.988786	CTCF.p2:-5:0.989
chr17	74268042	74268189	reg1025258.p1	5.707	+	TSC_hg19_v1_chr17_+_74261431 BC035511 EU176314	-6608	+	TSC_hg19_v1_chr17_+_74261282 BC060859 NM_182565	-6831	+	AK091467 AX747002 AB067504 NM_052916 TSC_hg19_v1_chr17_-_74236615	-31667	-	EU832276 EU832361 BC131559 AL136774 NM_032134	35555	-	TSC_hg19_v1_chr17_-_74349591 CU679229 BC009012	81534	-	TSC_hg19_v1_chr17_-_74349948 D61391 AK312637	81814	-	BC035511|FAM100B|283991|family with sequence similarity 100, member B##EU176314|FAM100B|283991|family with sequence similarity 100, member B##BC060859|FAM100B|283991|family with sequence similarity 100, member B##NM_182565|FAM100B|283991|family with sequence similarity 100, member B##AK091467|RNF157|114804|ring finger protein 157##AB067504|RNF157|114804|ring finger protein 157##NM_052916|RNF157|114804|ring finger protein 157##EU832276|QRICH2|84074|glutamine rich 2##EU832361|QRICH2|84074|glutamine rich 2##BC131559|QRICH2|84074|glutamine rich 2##AL136774|QRICH2|84074|glutamine rich 2##NM_032134|QRICH2|84074|glutamine rich 2##BC009012|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1##D61391|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1##AK312637|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1	0.671405	CTCF.p2:-25:0.671
chr4	102518499	102518603	reg1023195.p2	5.707	+	BC098424 EU192652 NM_000944 NM_001130691 NM_001130692 TSC_hg19_v1_chr4_-_102268635 EU192653	-249921	-	AK290532 TSC_hg19_v1_chr4_-_102268547	-250036	-	TSC_hg19_v1_chr4_-_102268343 AL353950	-250179	-	NM_001127507 NM_017935 TSC_hg19_v1_chr4_+_102711808	193245	+	TSC_hg19_v1_chr4_+_102711886 BC032241 AK292133 AL834291 EU051376 AB587395	193384	+	NM_001083907 TSC_hg19_v1_chr4_+_102734998 AK000713	216457	+	BC098424|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##EU192652|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_000944|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001130691|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001130692|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##EU192653|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AK290532|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AL353950|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001127507|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_017935|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##BC032241|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK292133|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AL834291|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##EU051376|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	0.988961	CTCF.p2:6:0.974
chr5	115174813	115174956	reg1026838.p1	5.707	+	D85777 Z31357 BC024241 AK130357 AK314231 TSC_hg19_v1_chr5_-_115152355 AK309390 NM_001801	-22521	-	TSC_hg19_v1_chr5_-_114961708 AY304583 AY304584 BC019349 AK075218 AK304210 AK027512 NM_001164468 NM_001164469 NM_181836	-213090	-	TSC_hg19_v1_chr5_-_114961697 AK074962	-213192	-	BC011033 TSC_hg19_v1_chr5_-_115177263 AB017507 AB590693 EU554057 BC012266 AK313320 NM_004707	2520	-	TSC_hg19_v1_chr5_+_115177642 NM_001284 BX647735 U91932 BC000804 D63643 BC012614 X99458 DQ891198 DQ894381 AK311843 BT009833 CR450341	2791	+	AK291655 BC068560 NM_173800 BC060869 AY560010 BC109022 BC109023	123327	+	D85777|CDO1|1036|cysteine dioxygenase, type I##Z31357|CDO1|1036|cysteine dioxygenase, type I##BC024241|CDO1|1036|cysteine dioxygenase, type I##AK130357|CDO1|1036|cysteine dioxygenase, type I##AK314231|CDO1|1036|cysteine dioxygenase, type I##NM_001801|CDO1|1036|cysteine dioxygenase, type I##AY304583|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AY304584|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##BC019349|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK075218|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AK304210|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK027512|TMED7|51014|transmembrane emp24 protein transport domain containing 7##NM_001164468|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_001164469|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_181836|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK074962|TMED7|51014|transmembrane emp24 protein transport domain containing 7##BC011033|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##AB017507|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##EU554057|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##BC012266|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##AK313320|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##NM_004707|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##NM_001284|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BX647735|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##U91932|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC000804|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##D63643|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC012614|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##X99458|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ891198|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ894381|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##AK311843|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BT009833|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##CR450341|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##AK291655|AQPEP|206338|laeverin##BC068560|AQPEP|206338|laeverin##NM_173800|AQPEP|206338|laeverin##BC060869|AQPEP|206338|laeverin##AY560010|AQPEP|206338|laeverin##BC109022|AQPEP|206338|laeverin##BC109023|AQPEP|206338|laeverin	0.102526	
chr19	43588497	43588646	reg1025875.p1	5.706	+	DQ891359 EU832659 EU832736 M20882 AK002132 BC022316 NM_031246	-1764	-	CU676656 M69245 U25988 BC020711 NM_001113410 NM_002785 NM_203287	-57985	-	BC136401 U18467 BC030979 AK309898 NM_001206650 NM_002783	-147282	-	AB527988 EU831982 EU832075 M73713 M25384 BC012607 NM_001130014 NM_002781	102051	-	U18468 U18469 M94891 X17097 BC008405 BC013431 BC063127 NM_002780 NM_213633 AK075149	121184	-	CR407605 CU676704 DQ891385 DQ894561 U25987 M34481 M94890 M58591 M34421 X17610 AK300187 AK300229 BC005925 BC020759 AK313256 NM_002784	185060	-	DQ891359|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832659|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832736|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M20882|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##BC022316|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##NM_031246|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M69245|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##U25988|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##BC020711|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_001113410|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_002785|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_203287|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##BC136401|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##U18467|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##BC030979|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_001206650|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_002783|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##EU831982|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##EU832075|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M73713|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M25384|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##BC012607|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_001130014|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_002781|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##U18468|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##U18469|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##M94891|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##X17097|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC013431|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC063127|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##NM_002780|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##NM_213633|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK075149|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##CR407605|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##DQ891385|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##DQ894561|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##U25987|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M34481|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M94890|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M58591|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M34421|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##X17610|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK300187|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK300229|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##BC005925|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##BC020759|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK313256|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##NM_002784|PSG9|5678|pregnancy specific beta-1-glycoprotein 9	0.994617	CTCF.p2:-7:0.995
chr22	43409898	43410034	reg1024746.p1	5.706	+	AL136845 NM_001184971	-54080	-	BC008037 NM_007229	-66920	-	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-156611	-	TSC_hg19_v1_chr22_-_43411136 AF128536	1173	-	TSC_hg19_v1_chr22_-_43411156 NM_001184970	1211	-	TSC_hg19_v1_chr22_-_43485410 AF104927 AF173935 AK315658 BC009058 AK095996 BC014968 AL136687 NM_012263	75421	-	AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184970|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF104927|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AF173935|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK315658|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC009058|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK095996|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC014968|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AL136687|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_012263|TTLL1|25809|tubulin tyrosine ligase-like family, member 1	0.0	
chr22	44143888	44143990	reg1024844.p1	5.706	+	TSC_hg19_v1_chr22_+_43808109 AK289774	-335822	+	TSC_hg19_v1_chr22_+_43808019 AK290541 AK297276 AK299516 AK299531 NM_001044370	-335922	+	AB528481 AF525689 BC127263 BC047916 TSC_hg19_v1_chr22_-_43739356 AK127719 NM_173050	-404601	-	BC039315 TSC_hg19_v1_chr22_-_44208121 AK296679 AK292498 AK292411 AK058069 NM_022785 NM_198856	64202	-	AK295399 AF115311 AL590119 AB587375 CR456588 CU013188 CU013476 DQ892373 DQ895583 CU688978 CU692628 BC022459 TSC_hg19_v1_chr22_-_44258315 AF176342 AF251263 AK313048 AK294622 AF188698 BC028171 NM_014351 BC030665	114364	-	BC104839 BC104843 BC143696 BC031820 AK056648 AK127172 NM_001177675 NM_138814	143910	-	AK289774|MPPED1|758|metallophosphoesterase domain containing 1##AK290541|MPPED1|758|metallophosphoesterase domain containing 1##AK297276|MPPED1|758|metallophosphoesterase domain containing 1##AK299516|MPPED1|758|metallophosphoesterase domain containing 1##AK299531|MPPED1|758|metallophosphoesterase domain containing 1##NM_001044370|MPPED1|758|metallophosphoesterase domain containing 1##AF525689|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC127263|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC047916|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##AK127719|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##NM_173050|SCUBE1|80274|signal peptide, CUB domain, EGF-like 1##BC039315|EFCAB6|64800|EF-hand calcium binding domain 6##AK296679|EFCAB6|64800|EF-hand calcium binding domain 6##AK292498|EFCAB6|64800|EF-hand calcium binding domain 6##AK292411|EFCAB6|64800|EF-hand calcium binding domain 6##AK058069|EFCAB6|64800|EF-hand calcium binding domain 6##NM_022785|EFCAB6|64800|EF-hand calcium binding domain 6##NM_198856|EFCAB6|64800|EF-hand calcium binding domain 6##AK295399|SULT4A1|25830|sulfotransferase family 4A, member 1##AF115311|SULT4A1|25830|sulfotransferase family 4A, member 1##AL590119|SULT4A1|25830|sulfotransferase family 4A, member 1##CR456588|SULT4A1|25830|sulfotransferase family 4A, member 1##CU013188|SULT4A1|25830|sulfotransferase family 4A, member 1##CU013476|SULT4A1|25830|sulfotransferase family 4A, member 1##DQ892373|SULT4A1|25830|sulfotransferase family 4A, member 1##DQ895583|SULT4A1|25830|sulfotransferase family 4A, member 1##BC022459|SULT4A1|25830|sulfotransferase family 4A, member 1##AF176342|SULT4A1|25830|sulfotransferase family 4A, member 1##AF251263|SULT4A1|25830|sulfotransferase family 4A, member 1##AK313048|SULT4A1|25830|sulfotransferase family 4A, member 1##AK294622|SULT4A1|25830|sulfotransferase family 4A, member 1##AF188698|SULT4A1|25830|sulfotransferase family 4A, member 1##BC028171|SULT4A1|25830|sulfotransferase family 4A, member 1##NM_014351|SULT4A1|25830|sulfotransferase family 4A, member 1##BC030665|SULT4A1|25830|sulfotransferase family 4A, member 1##BC104839|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC104843|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC143696|PNPLA5|150379|patatin-like phospholipase domain containing 5##BC031820|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK056648|PNPLA5|150379|patatin-like phospholipase domain containing 5##AK127172|PNPLA5|150379|patatin-like phospholipase domain containing 5##NM_001177675|PNPLA5|150379|patatin-like phospholipase domain containing 5##NM_138814|PNPLA5|150379|patatin-like phospholipase domain containing 5	0.0	
chr5	43010862	43011017	reg1025897.p2	5.706	+	TSC_hg19_v1_chr5_-_42993436 AK056817	-17493	-	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	-198948	-	AK303469 NM_001134848 AK127368 BC015985 BC039102 TSC_hg19_v1_chr5_+_42756958	-254001	+	AB463523 BC067873 AY032883 NM_001014279	29357	-	AK307963 TSC_hg19_v1_chr5_+_43121018 BC045109	110062	+	TSC_hg19_v1_chr5_+_43121609 AK299315 AK307977	110675	+	AK056817|FLJ32255|643977|uncharacterized LOC643977##Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK303469|CCDC152|100129792|coiled-coil domain containing 152##NM_001134848|CCDC152|100129792|coiled-coil domain containing 152##AK127368|CCDC152|100129792|coiled-coil domain containing 152##BC015985|CCDC152|100129792|coiled-coil domain containing 152##BC039102|CCDC152|100129792|coiled-coil domain containing 152##BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39##AK307963|ZNF131|7690|zinc finger protein 131##AK299315|ZNF131|7690|zinc finger protein 131##AK307977|ZNF131|7690|zinc finger protein 131	0.185381	
chr17	66007396	66007486	reg1025057.p2	5.705	+	BC105124 BC112073 BC036760 TSC_hg19_v1_chr17_-_65989703 AK026583 NM_181655 NM_181656	-17768	-	TSC_hg19_v1_chr17_+_65936590 AK027184	-70807	+	AK022570 TSC_hg19_v1_chr17_+_65916176	-91272	+	TSC_hg19_v1_chr17_+_66031850 NM_002266 U09559 U28386 AK024833 AK058111 AK291954 BC005978 BC013257 BC053343 BC146905	24399	+	TSC_hg19_v1_chr17_+_66031889 BC034443	24447	+	TSC_hg19_v1_chr17_+_66097706 BC045718	90257	+	BC105124|C17orf58|284018|chromosome 17 open reading frame 58##BC112073|C17orf58|284018|chromosome 17 open reading frame 58##BC036760|C17orf58|284018|chromosome 17 open reading frame 58##AK026583|C17orf58|284018|chromosome 17 open reading frame 58##NM_181655|C17orf58|284018|chromosome 17 open reading frame 58##NM_181656|C17orf58|284018|chromosome 17 open reading frame 58##AK027184|BPTF|2186|bromodomain PHD finger transcription factor##AK022570|BPTF|2186|bromodomain PHD finger transcription factor##NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC045718|LOC100499466|100499466|uncharacterized LOC100499466	0.999807	CTCF.p2:9:1.000
chr20	50836143	50836218	reg1022475.p1	5.705	+	BC012759 BC041622 NM_018197 NM_022088 NM_199426 NM_199427	-27657	-	BT009760 AB527686 BC021087 AK001744 TSC_hg19_v1_chr20_-_50808313 AK090547 BC031524 AK001596 AK222712	-27925	-	AY170621 AY170622 AY172738 BC111714 AK001666 NM_020436	-417184	-	BX640770 NM_173485	752765	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	753598	+	AK302570 NM_001193421	965641	+	BC012759|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC041622|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_018197|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_022088|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199426|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199427|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BT009760|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC021087|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001744|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK090547|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC031524|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001596|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK222712|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AY170621|SALL4|57167|sal-like 4 (Drosophila)##AY170622|SALL4|57167|sal-like 4 (Drosophila)##AY172738|SALL4|57167|sal-like 4 (Drosophila)##BC111714|SALL4|57167|sal-like 4 (Drosophila)##AK001666|SALL4|57167|sal-like 4 (Drosophila)##NM_020436|SALL4|57167|sal-like 4 (Drosophila)##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2##AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2	0.353397	CTCF.p2:-9:0.353
chr7	156442866	156442998	reg1026056.p1	5.705	+	NM_001184997 AF325690	-7237	+	NM_030936 TSC_hg19_v1_chr7_+_156433487 AK314067 NM_001184996 AL136874 BC028120 AK307316	-9467	+	AF063598 TSC_hg19_v1_chr7_-_156433234 BC050364 BC058889 BC031037 BC070228 AK056371 AF439977	-9701	-	TSC_hg19_v1_chr7_-_156468370 CU688401	25490	-	TSC_hg19_v1_chr7_-_156685868 AL834394 AB463099 AM392621 AM393143 AM393254 AM393828 CU676016 AF402318 BC017663 BC063649 AF107454 AK021727 AK291037 AK299753	242815	-	TSC_hg19_v1_chr7_-_156685878 NM_022458	242984	-	NM_001184997|RNF32|140545|ring finger protein 32##AF325690|RNF32|140545|ring finger protein 32##NM_030936|RNF32|140545|ring finger protein 32##AK314067|RNF32|140545|ring finger protein 32##NM_001184996|RNF32|140545|ring finger protein 32##AL136874|RNF32|140545|ring finger protein 32##BC028120|RNF32|140545|ring finger protein 32##AK307316|RNF32|140545|ring finger protein 32##AF063598|C7orf13|129790|chromosome 7 open reading frame 13##BC050364|C7orf13|129790|chromosome 7 open reading frame 13##BC031037|C7orf13|129790|chromosome 7 open reading frame 13##BC070228|C7orf13|129790|chromosome 7 open reading frame 13##AK056371|C7orf13|129790|chromosome 7 open reading frame 13##AF439977|C7orf13|129790|chromosome 7 open reading frame 13##AL834394|LMBR1|64327|limb region 1 homolog (mouse)##AM392621|LMBR1|64327|limb region 1 homolog (mouse)##AM393143|LMBR1|64327|limb region 1 homolog (mouse)##AM393254|LMBR1|64327|limb region 1 homolog (mouse)##AM393828|LMBR1|64327|limb region 1 homolog (mouse)##AF402318|LMBR1|64327|limb region 1 homolog (mouse)##BC017663|LMBR1|64327|limb region 1 homolog (mouse)##BC063649|LMBR1|64327|limb region 1 homolog (mouse)##AK021727|LMBR1|64327|limb region 1 homolog (mouse)##AK291037|LMBR1|64327|limb region 1 homolog (mouse)##AK299753|LMBR1|64327|limb region 1 homolog (mouse)##NM_022458|LMBR1|64327|limb region 1 homolog (mouse)	0.712465	CTCF.p2:-1:0.712
chr8	124428500	124428662	reg1022300.p2	5.705	+	TSC_hg19_v1_chr8_-_124408688 NM_014109	-19884	-	TSC_hg19_v1_chr8_-_124408671 AK097133	-19904	-	TSC_hg19_v1_chr8_-_124408665 BC112942	-19916	-	CR749832 TSC_hg19_v1_chr8_-_124428591	17	-	AK001066 NM_018024 AK225643 TSC_hg19_v1_chr8_+_124429026 AK293492 BC008781 AB528691 CU679103	445	+	BC120963 BC120964 BC024030 NM_148177	115798	-	NM_014109|ATAD2|29028|ATPase family, AAA domain containing 2##AK097133|ATAD2|29028|ATPase family, AAA domain containing 2##BC112942|ATAD2|29028|ATPase family, AAA domain containing 2##CR749832|ATAD2|29028|ATPase family, AAA domain containing 2##AK001066|WDYHV1|55093|WDYHV motif containing 1##NM_018024|WDYHV1|55093|WDYHV motif containing 1##AK225643|WDYHV1|55093|WDYHV motif containing 1##AK293492|WDYHV1|55093|WDYHV motif containing 1##BC008781|WDYHV1|55093|WDYHV motif containing 1##BC120963|FBXO32|114907|F-box protein 32##BC120964|FBXO32|114907|F-box protein 32##BC024030|FBXO32|114907|F-box protein 32##NM_148177|FBXO32|114907|F-box protein 32	0.0	
chr9	46797262	46797400	reg1025250.p1	5.705	+	TSC_hg19_v1_chr9_+_45441926 BC006438	-1355405	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-3112488	+	NM_001145196	-3166602	-	BC040528 NM_001113541 NM_015667	18712278	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	19659970	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	19661165	-	BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.997456	CTCF.p2:16:0.997
chr17	56524748	56524929	reg1000254.p1	5.704	+	NM_017763 TSC_hg19_v1_chr17_-_56494959 CR627423	-29894	-	TSC_hg19_v1_chr17_-_56494896 CR749257	-29945	-	AB527734 TSC_hg19_v1_chr17_-_56492959 AK296769 AK000322 BC109028	-31802	-	BC115385 BC115386 BC033017 BC033020 NM_001080439 TSC_hg19_v1_chr17_-_56565791	40911	-	TSC_hg19_v1_chr17_-_56591953 AK308877	67104	-	AF264717 TSC_hg19_v1_chr17_-_56595226 BC035609 NM_004687	70405	-	NM_017763|RNF43|54894|ring finger protein 43##CR627423|RNF43|54894|ring finger protein 43##CR749257|RNF43|54894|ring finger protein 43##AK296769|RNF43|54894|ring finger protein 43##AK000322|RNF43|54894|ring finger protein 43##BC109028|RNF43|54894|ring finger protein 43##BC115385|HSF5|124535|heat shock transcription factor family member 5##BC115386|HSF5|124535|heat shock transcription factor family member 5##BC033017|HSF5|124535|heat shock transcription factor family member 5##BC033020|HSF5|124535|heat shock transcription factor family member 5##NM_001080439|HSF5|124535|heat shock transcription factor family member 5##AK308877|MTMR4|9110|myotubularin related protein 4##AF264717|MTMR4|9110|myotubularin related protein 4##BC035609|MTMR4|9110|myotubularin related protein 4##NM_004687|MTMR4|9110|myotubularin related protein 4	0.0	
chr4	133149095	133149206	reg1024657.p2	5.704	+	NM_001099783	-3131869	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-3134283	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-3134560	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	921306	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	924133	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	1973768	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.957152	CTCF.p2:4:0.957
chr5	177497080	177497207	reg1028476.p1	5.704	+	TSC_hg19_v1_chr5_+_177482580 AB055766	-14565	+	AF076215 NM_006261	-73901	-	AB018295 NM_173663	-289659	-	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	43485	+	TSC_hg19_v1_chr5_+_177558014 AK093481 AK094065 AX748156 AX748436 AK125337	60868	+	TSC_hg19_v1_chr5_+_177558026 BC009911 DQ494789 NM_022762	60889	+	AB055766|RPL19|6143|ribosomal protein L19##AF076215|PROP1|5626|PROP paired-like homeobox 1##NM_006261|PROP1|5626|PROP paired-like homeobox 1##AB018295|FAM153A|285596|family with sequence similarity 153, member A##NM_173663|FAM153A|285596|family with sequence similarity 153, member A##BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3##AK093481|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK094065|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK125337|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##BC009911|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##DQ494789|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##NM_022762|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)	0.521949	CTCF.p2:4:0.522
chr6	49998797	49998932	reg1027585.p1	5.704	+	DQ012014 DQ012015 NM_001037497 NM_001037728	-9194	-	DQ012017 NM_001037729	-61527	-	AB528815 DQ012018 NM_001037499	-67047	-	DQ012016 NM_001037498	17499	-	AY028376 NM_172238	682392	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	787671	+	DQ012014|DEFB110|245913|defensin, beta 110 locus##DQ012015|DEFB110|245913|defensin, beta 110 locus##NM_001037497|DEFB110|245913|defensin, beta 110 locus##NM_001037728|DEFB110|245913|defensin, beta 110 locus##DQ012017|DEFB113|245927|defensin, beta 113##NM_001037729|DEFB113|245927|defensin, beta 113##DQ012018|DEFB114|245928|defensin, beta 114##NM_001037499|DEFB114|245928|defensin, beta 114##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)	0.262929	CTCF.p2:0:0.263
chr7	25199719	25199850	reg1025780.p1	5.704	+	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-34844	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	-34907	-	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	-180040	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	20087	-	AB040290 AF330057 AF440392 NM_022150	68296	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	992149	+	AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3	0.999733	CTCF.p2:29:1.000
chr9	44355403	44355515	reg1026186.p2	5.704	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-670616	+	NM_001145196	-724730	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-1221972	-	TSC_hg19_v1_chr9_+_45441926 BC006438	1086467	+	BC040528 NM_001113541 NM_015667	21154150	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	22101842	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.997456	CTCF.p2:-14:0.997
chr1	12841747	12841881	reg1022784.p1	5.703	+	NM_001080830	-6831	+	BC029894 NM_152290 AK026705 AK298760	-35648	+	AK127828 NM_001103169 NM_001103170	-65697	+	AK125568 AL049686 NM_023013 BC144199	9746	+	BC144426 AL049680 NM_001146344	49448	-	AB464565 BC171859 BC171865 BC171866 NM_001146181	66374	-	NM_001080830|PRAMEF12|390999|PRAME family member 12##BC029894|C1orf158|93190|chromosome 1 open reading frame 158##NM_152290|C1orf158|93190|chromosome 1 open reading frame 158##AK026705|C1orf158|93190|chromosome 1 open reading frame 158##AK298760|C1orf158|93190|chromosome 1 open reading frame 158##AK127828|AADACL3|126767|arylacetamide deacetylase-like 3##NM_001103169|AADACL3|126767|arylacetamide deacetylase-like 3##NM_001103170|AADACL3|126767|arylacetamide deacetylase-like 3##AK125568|PRAMEF1|65121|PRAME family member 1##AL049686|PRAMEF1|65121|PRAME family member 1##NM_023013|PRAMEF1|65121|PRAME family member 1##BC144199|PRAMEF1|65121|PRAME family member 1##BC144426|PRAMEF11|440560|PRAME family member 11##AL049680|PRAMEF11|440560|PRAME family member 11##NM_001146344|PRAMEF11|440560|PRAME family member 11##BC171859|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like##BC171865|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like##BC171866|HNRNPCL1|343069|heterogeneous nuclear ribonucleoprotein C-like 1##NM_001146181|LOC649330|649330|heterogeneous nuclear ribonucleoprotein C-like	0.222069	CTCF.p2:17:0.222
chr11	67139007	67139140	reg1024676.p1	5.703	+	AF179890 BC001334 TSC_hg19_v1_chr11_-_67121006 BC070250 AB209274 NM_021173	-18069	-	AK096155 TSC_hg19_v1_chr11_+_67085309	-53759	+	TSC_hg19_v1_chr11_+_67071027 AK074432 AK001790 AK094226 BC007709 AB527672 AB072360 AB099291	-68032	+	DQ891525 DQ894715 AB528390 AY049779 BC066229 BC066230 BC066231 AF172854 BC012939 AF176911 NM_013246	2033	-	AK298052 NM_001166212	2574	-	TSC_hg19_v1_chr11_+_67159464 BC014848 NM_004584 U53174 AK315348 CR536508	20395	+	AF179890|POLD4|57804|polymerase (DNA-directed), delta 4##BC001334|POLD4|57804|polymerase (DNA-directed), delta 4##BC070250|POLD4|57804|polymerase (DNA-directed), delta 4##AB209274|POLD4|57804|polymerase (DNA-directed), delta 4##NM_021173|POLD4|57804|polymerase (DNA-directed), delta 4##AK096155|LOC100130987|100130987|uncharacterized LOC100130987##AK074432|SSH3|54961|slingshot homolog 3 (Drosophila)##AK001790|SSH3|54961|slingshot homolog 3 (Drosophila)##AK094226|SSH3|54961|slingshot homolog 3 (Drosophila)##BC007709|SSH3|54961|slingshot homolog 3 (Drosophila)##AB072360|SSH3|54961|slingshot homolog 3 (Drosophila)##AB099291|SSH3|54961|slingshot homolog 3 (Drosophila)##DQ891525|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ894715|CLCF1|23529|cardiotrophin-like cytokine factor 1##AY049779|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066229|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066230|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066231|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF172854|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC012939|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF176911|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_013246|CLCF1|23529|cardiotrophin-like cytokine factor 1##AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC014848|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_004584|RAD9A|5883|RAD9 homolog A (S. pombe)##U53174|RAD9A|5883|RAD9 homolog A (S. pombe)##AK315348|RAD9A|5883|RAD9 homolog A (S. pombe)##CR536508|RAD9A|5883|RAD9 homolog A (S. pombe)	0.274012	CTCF.p2:-3:0.274
chr12	118294553	118294682	reg1029772.p1	5.703	+	AK294435 AF446135 EU753241 U17327 AK307481 NM_000620 NM_001204218	-495109	-	AF446136 TSC_hg19_v1_chr12_-_117799037	-495596	-	NM_001204214	-547403	-	NM_173598	111410	-	NM_001130112 NM_001206801 NM_007370 NM_181578 TSC_hg19_v1_chr12_+_118454507 AK291107 AK094575 AK290685 BC001866 BC013961 AB208992 BC020440 L07540 AB464140 CU674898 CR407651	159951	+	AK310892 TSC_hg19_v1_chr12_-_118498977 BC015887 AK298513 AF229181 NM_018639	204318	-	AK294435|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446135|NOS1|4842|nitric oxide synthase 1 (neuronal)##EU753241|NOS1|4842|nitric oxide synthase 1 (neuronal)##U17327|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK307481|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_000620|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204218|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446136|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_173598|KSR2|283455|kinase suppressor of ras 2##NM_001130112|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_001206801|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_007370|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_181578|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK291107|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK094575|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK290685|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC001866|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC013961|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AB208992|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC020440|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##L07540|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##CR407651|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK310892|WSB2|55884|WD repeat and SOCS box containing 2##BC015887|WSB2|55884|WD repeat and SOCS box containing 2##AK298513|WSB2|55884|WD repeat and SOCS box containing 2##AF229181|WSB2|55884|WD repeat and SOCS box containing 2##NM_018639|WSB2|55884|WD repeat and SOCS box containing 2	0.769854	CTCF.p2:-5:0.770
chr12	48264376	48264519	reg1025252.p2	5.703	+	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	-50783	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-97413	+	AK092448 NM_001098531	-111573	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	34354	-	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	92891	+	TSC_hg19_v1_chr12_+_48357387 AK310035 AK313698 AK299154 BC107792	92973	+	AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C##AK310035|TMEM106C|79022|transmembrane protein 106C##AK313698|TMEM106C|79022|transmembrane protein 106C##AK299154|TMEM106C|79022|transmembrane protein 106C##BC107792|TMEM106C|79022|transmembrane protein 106C	0.012627	
chr12	82752171	82752352	reg1016474.p1	5.703	+	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	-85	-	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	-599152	-	BC104912 BC143485 NM_001220475 NM_001220476 AK126971 TSC_hg19_v1_chr12_-_82152435 AB210009 NM_001220473 NM_001220474	-599890	-	NM_032230 TSC_hg19_v1_chr12_+_82752307 AK310231 AK026442 BC029120 CU688600	48	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	328439	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	328656	+	BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59##AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC104912|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC143485|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220475|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220476|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK126971|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AB210009|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220473|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220474|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_032230|C12orf26|84190|chromosome 12 open reading frame 26##AK310231|C12orf26|84190|chromosome 12 open reading frame 26##AK026442|C12orf26|84190|chromosome 12 open reading frame 26##BC029120|C12orf26|84190|chromosome 12 open reading frame 26##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2	0.274187	CTCF.p2:102:0.240
chr17	38020220	38020401	reg1016421.p1	5.703	+	AK290115 NM_001242443	-124091	+	AK125544 NM_001242442	-125287	+	AK294620 NM_001030002 BC006535 TSC_hg19_v1_chr17_+_37894600	-125731	+	BC032707 AF129512 AY377973 AY377975 AY377976 AY377977 AY377978 AY377979 AY377980 AY377981 AY377982 NM_012481 NM_183228 NM_183229 NM_183230 NM_183231 NM_183232	120	-	AK292383 NM_198844 NM_199321 BC043152 AY251603 AY251604	4133	+	AF119884 NM_018530	53482	-	AK290115|GRB7|2886|growth factor receptor-bound protein 7##NM_001242443|GRB7|2886|growth factor receptor-bound protein 7##AK125544|GRB7|2886|growth factor receptor-bound protein 7##NM_001242442|GRB7|2886|growth factor receptor-bound protein 7##AK294620|GRB7|2886|growth factor receptor-bound protein 7##NM_001030002|GRB7|2886|growth factor receptor-bound protein 7##BC006535|GRB7|2886|growth factor receptor-bound protein 7##BC032707|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AF129512|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377973|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377975|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377976|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377977|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377978|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377979|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377980|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377981|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377982|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_012481|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183228|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183229|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183230|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183231|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183232|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AK292383|ZPBP2|124626|zona pellucida binding protein 2##NM_198844|ZPBP2|124626|zona pellucida binding protein 2##NM_199321|ZPBP2|124626|zona pellucida binding protein 2##BC043152|ZPBP2|124626|zona pellucida binding protein 2##AY251603|ZPBP2|124626|zona pellucida binding protein 2##AY251604|ZPBP2|124626|zona pellucida binding protein 2##AF119884|GSDMB|55876|gasdermin B##NM_018530|GSDMB|55876|gasdermin B	0.0	
chr3	48199699	48199843	reg1025010.p1	5.703	+	TSC_hg19_v1_chr3_-_48130743 AK054577 NM_001134364 NM_002375 NM_030885	-69071	-	TSC_hg19_v1_chr3_-_48130339 BC019229 BC067228 BC051843 M64571 U19727 AB209377 AK307606 BC008715 BC012794 BC015149 AK297242	-69434	-	TSC_hg19_v1_chr3_-_48040260 CU679053 EU831606 EU831693	-159467	-	AF277722 AY137580 EU812118 CU675643 AB590275 DQ890753 DQ892919 DQ896168 AK290554 TSC_hg19_v1_chr3_-_48229511	29657	-	BC007401 BC018642 NM_001789 NM_201567 TSC_hg19_v1_chr3_-_48229900 M81933	30088	-	NM_004345 BC055089 X89658 U19970 CU691114 AB590666 AY251531 Z38026 AY162210 CR457083 CR541961	65147	+	AK054577|MAP4|4134|microtubule-associated protein 4##NM_001134364|MAP4|4134|microtubule-associated protein 4##NM_002375|MAP4|4134|microtubule-associated protein 4##NM_030885|MAP4|4134|microtubule-associated protein 4##BC019229|MAP4|4134|microtubule-associated protein 4##BC067228|MAP4|4134|microtubule-associated protein 4##BC051843|MAP4|4134|microtubule-associated protein 4##M64571|MAP4|4134|microtubule-associated protein 4##U19727|MAP4|4134|microtubule-associated protein 4##AB209377|MAP4|4134|microtubule-associated protein 4##AK307606|MAP4|4134|microtubule-associated protein 4##BC008715|MAP4|4134|microtubule-associated protein 4##BC012794|MAP4|4134|microtubule-associated protein 4##BC015149|MAP4|4134|microtubule-associated protein 4##AK297242|MAP4|4134|microtubule-associated protein 4##EU831606|MAP4|4134|microtubule-associated protein 4##EU831693|MAP4|4134|microtubule-associated protein 4##AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##BC007401|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##BC018642|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_001789|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_201567|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##M81933|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_004345|CAMP|820|cathelicidin antimicrobial peptide##BC055089|CAMP|820|cathelicidin antimicrobial peptide##X89658|CAMP|820|cathelicidin antimicrobial peptide##U19970|CAMP|820|cathelicidin antimicrobial peptide##AY251531|CAMP|820|cathelicidin antimicrobial peptide##Z38026|CAMP|820|cathelicidin antimicrobial peptide##AY162210|CAMP|820|cathelicidin antimicrobial peptide##CR457083|CAMP|820|cathelicidin antimicrobial peptide##CR541961|CAMP|820|cathelicidin antimicrobial peptide	0.163658	
chr4	148846394	148846520	reg1026285.p1	5.703	+	AB050785 BC128055 NM_024605 BC126899 BC109029 BC109030	-193000	+	TSC_hg19_v1_chr4_+_148653238 AK123785	-193206	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	-241193	-	TSC_hg19_v1_chr4_-_149357955 AB587357	511525	-	TSC_hg19_v1_chr4_-_149363305 BC111758	516882	-	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	517127	-	AB050785|ARHGAP10|79658|Rho GTPase activating protein 10##BC128055|ARHGAP10|79658|Rho GTPase activating protein 10##NM_024605|ARHGAP10|79658|Rho GTPase activating protein 10##BC126899|ARHGAP10|79658|Rho GTPase activating protein 10##BC109029|ARHGAP10|79658|Rho GTPase activating protein 10##BC109030|ARHGAP10|79658|Rho GTPase activating protein 10##AK123785|ARHGAP10|79658|Rho GTPase activating protein 10##BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	0.0	
chr6	78330157	78330285	reg1026105.p1	5.703	+	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	-157072	-	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	-1547922	-	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-1871212	+	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	1247034	+	BC064611 TSC_hg19_v1_chr6_-_79675737 AK000712	1345531	-	TSC_hg19_v1_chr6_+_79787573 BC036479	1457339	+	BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC064611|PHIP|55023|pleckstrin homology domain interacting protein##AK000712|PHIP|55023|pleckstrin homology domain interacting protein##BC036479|PHIP|55023|pleckstrin homology domain interacting protein	0.182445	
chr9	89722085	89722200	reg1024452.p1	5.703	+	L13698 NM_002048	-160039	-	TSC_hg19_v1_chr9_-_88969326 AL832193 CR936608 AK055546 CR933644 AL832026 BX641077 CR933643 BC111003 NM_001185059 NM_001185074 NM_024617	-752769	-	AK308352 TSC_hg19_v1_chr9_-_88969321 BC032456	-752853	-	AK127445 NM_001001709 BC132741 BC136791 HQ258059	41459	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	390444	+	TSC_hg19_v1_chr9_+_90112781 NM_004938 X76104 BC003614 AK295119	390726	+	L13698|GAS1|2619|growth arrest-specific 1##NM_002048|GAS1|2619|growth arrest-specific 1##AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1##NM_004938|DAPK1|1612|death-associated protein kinase 1##X76104|DAPK1|1612|death-associated protein kinase 1##AK295119|DAPK1|1612|death-associated protein kinase 1	0.9794	CTCF.p2:-16:0.979
chr9	98031163	98031293	reg1027310.p1	5.703	+	AK298959 TSC_hg19_v1_chr9_+_97766501 AK300486	-264753	+	NM_001193329 AJ560639	-509231	+	BC029616 TSC_hg19_v1_chr9_+_97488999	-542225	+	X66894 NM_001243743	48292	-	AK312548 AK222871 TSC_hg19_v1_chr9_-_98079974 BC015748 X66893 AK304887 NM_000136 NM_001243744	48703	-	TSC_hg19_v1_chr9_-_98268874 AB209495 AB233423 AB233424 CU692174	237645	-	AK298959|C9orf3|84909|chromosome 9 open reading frame 3##AK300486|C9orf3|84909|chromosome 9 open reading frame 3##NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3##AJ560639|C9orf3|84909|chromosome 9 open reading frame 3##BC029616|C9orf3|84909|chromosome 9 open reading frame 3##X66894|FANCC|2176|Fanconi anemia, complementation group C##NM_001243743|FANCC|2176|Fanconi anemia, complementation group C##AK312548|FANCC|2176|Fanconi anemia, complementation group C##AK222871|FANCC|2176|Fanconi anemia, complementation group C##BC015748|FANCC|2176|Fanconi anemia, complementation group C##X66893|FANCC|2176|Fanconi anemia, complementation group C##AK304887|FANCC|2176|Fanconi anemia, complementation group C##NM_000136|FANCC|2176|Fanconi anemia, complementation group C##NM_001243744|FANCC|2176|Fanconi anemia, complementation group C##AB209495|PTCH1|5727|patched 1##AB233423|PTCH1|5727|patched 1##AB233424|PTCH1|5727|patched 1	0.072512	
chrX	154215598	154215740	reg1029012.p1	5.703	+	TSC_hg19_v1_chrX_+_154114626 NM_012151 BC071963 AB462986 AM393473 AM393736 BC039693 DQ896667 NM_001007523 NM_001007524	-101040	+	CU692668 AK313707 BC111967 BC111969 M90707 BC022513 AK289947 BC064380 BC098389 NM_019863	-101166	-	BC130510 BC130512 AF254576 NM_001017990 NM_080720 BC134365 HQ258044 BC101415 BC101417 BC101418 BC128034 CR542230	-102383	+	FN811132 AX746360 X01179 K01740 BC150305 AK292902 M14113 NM_000132 AK307726	35229	-	NM_023934 AJ272054 BC000255 AF320778 AK313143 BC072685 TSC_hg19_v1_chrX_+_154255191 BC108657 CU674108 AB528138 AM393227 AM393536 AY032594	39469	+	AK295164 TSC_hg19_v1_chrX_-_154255216	39546	-	NM_012151|F8A1|8263|coagulation factor VIII-associated 1##BC071963|F8A1|8263|coagulation factor VIII-associated 1##AM393473|F8A1|8263|coagulation factor VIII-associated 1##AM393736|F8A1|8263|coagulation factor VIII-associated 1##BC039693|F8A1|8263|coagulation factor VIII-associated 1##DQ896667|F8A1|8263|coagulation factor VIII-associated 1##NM_001007523|F8A2|474383|coagulation factor VIII-associated 2##NM_001007524|F8A3|474384|coagulation factor VIII-associated 3##AK313707|F8|2157|coagulation factor VIII, procoagulant component##BC111967|F8|2157|coagulation factor VIII, procoagulant component##BC111969|F8|2157|coagulation factor VIII, procoagulant component##M90707|F8|2157|coagulation factor VIII, procoagulant component##BC022513|F8|2157|coagulation factor VIII, procoagulant component##AK289947|F8|2157|coagulation factor VIII, procoagulant component##BC064380|F8|2157|coagulation factor VIII, procoagulant component##BC098389|F8|2157|coagulation factor VIII, procoagulant component##NM_019863|F8|2157|coagulation factor VIII, procoagulant component##BC130510|H2AFB3|83740|H2A histone family, member B3##BC130512|H2AFB3|83740|H2A histone family, member B3##AF254576|H2AFB3|83740|H2A histone family, member B3##NM_001017990|H2AFB1|474382|H2A histone family, member B1##NM_080720|H2AFB3|83740|H2A histone family, member B3##BC134365|H2AFB2|474381|H2A histone family, member B2##HQ258044|H2AFB3|83740|H2A histone family, member B3##BC101415|H2AFB3|83740|H2A histone family, member B3##BC101417|H2AFB3|83740|H2A histone family, member B3##BC101418|H2AFB3|83740|H2A histone family, member B3##BC128034|H2AFB1|474382|H2A histone family, member B1##CR542230|H2AFB1|474382|H2A histone family, member B1##FN811132|F8|2157|coagulation factor VIII, procoagulant component##AX746360|F8|2157|coagulation factor VIII, procoagulant component##X01179|F8|2157|coagulation factor VIII, procoagulant component##K01740|F8|2157|coagulation factor VIII, procoagulant component##AK292902|F8|2157|coagulation factor VIII, procoagulant component##M14113|F8|2157|coagulation factor VIII, procoagulant component##NM_000132|F8|2157|coagulation factor VIII, procoagulant component##AK307726|F8|2157|coagulation factor VIII, procoagulant component##NM_023934|FUNDC2|65991|FUN14 domain containing 2##AJ272054|FUNDC2|65991|FUN14 domain containing 2##BC000255|FUNDC2|65991|FUN14 domain containing 2##AF320778|FUNDC2|65991|FUN14 domain containing 2##AK313143|FUNDC2|65991|FUN14 domain containing 2##BC072685|FUNDC2|65991|FUN14 domain containing 2##BC108657|FUNDC2|65991|FUN14 domain containing 2##AM393227|FUNDC2|65991|FUN14 domain containing 2##AM393536|FUNDC2|65991|FUN14 domain containing 2##AY032594|FUNDC2|65991|FUN14 domain containing 2##AK295164|F8|2157|coagulation factor VIII, procoagulant component	0.027188	
chrX	48749058	48749212	reg1026157.p2	5.703	+	DQ893525 TSC_hg19_v1_chrX_-_48693984 BC002851 AF181562 NM_013271 BC094731	-55140	-	AB093575 NM_181532	-61853	+	AB385398 AF132609 BT006649 BC013737 AK303012 TSC_hg19_v1_chrX_+_48661268	-87948	+	TSC_hg19_v1_chrX_-_48755052 AJ005895 BC010142 AF077039 BC091473 BC028017 AK290207 BC029446	5918	-	NM_001032381 NM_001032382 NM_001032383 NM_001167989 NM_144495 TSC_hg19_v1_chrX_+_48755213 NM_001167990 AB016533 BC012358	6080	+	TSC_hg19_v1_chrX_+_48755316 AJ242829	6184	+	DQ893525|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor##BC002851|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor##AF181562|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor##NM_013271|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor##BC094731|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor##AB093575|ERAS|3266|ES cell expressed Ras##NM_181532|ERAS|3266|ES cell expressed Ras##AF132609|HDAC6|10013|histone deacetylase 6##BT006649|HDAC6|10013|histone deacetylase 6##BC013737|HDAC6|10013|histone deacetylase 6##AK303012|HDAC6|10013|histone deacetylase 6##AJ005895|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##BC010142|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##AF077039|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##BC091473|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##BC028017|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##AK290207|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##BC029446|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##NM_001032381|PQBP1|10084|polyglutamine binding protein 1##NM_001032382|PQBP1|10084|polyglutamine binding protein 1##NM_001032383|PQBP1|10084|polyglutamine binding protein 1##NM_001167989|PQBP1|10084|polyglutamine binding protein 1##NM_144495|PQBP1|10084|polyglutamine binding protein 1##NM_001167990|PQBP1|10084|polyglutamine binding protein 1##AB016533|PQBP1|10084|polyglutamine binding protein 1##BC012358|PQBP1|10084|polyglutamine binding protein 1##AJ242829|PQBP1|10084|polyglutamine binding protein 1	0.969105	CTCF.p2:8:0.969
chr11	44655343	44655462	reg1014693.p3	5.702	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-68175	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-68237	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-323726	-	NM_130783	130573	+	TSC_hg19_v1_chr11_-_44956087 AF010315	300705	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	317015	-	AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_130783|TSPAN18|90139|tetraspanin 18##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11	0.998382	CTCF.p2:-18:0.998
chr1	229617641	229617821	reg1005185.p1	5.702	+	TSC_hg19_v1_chr1_-_229569842 AK096902 AK300697 BC012597 BX648545 J00068 NM_001100	-47889	-	NM_145257 BC071609 TSC_hg19_v1_chr1_-_229478768	-138999	-	BC015419 TSC_hg19_v1_chr1_-_229478279 BC039241	-139432	-	AB384686 DQ894268 EU176236 AK092339 AK314431 AX747487 TSC_hg19_v1_chr1_-_229644075 BC020107 AK304861	26304	-	TSC_hg19_v1_chr1_-_229644079 AK001676 NM_018230 AK304061	26369	-	TSC_hg19_v1_chr1_-_229694431 AB013380 BC064930 AF216833 NM_012089	76697	-	AK096902|ACTA1|58|actin, alpha 1, skeletal muscle##AK300697|ACTA1|58|actin, alpha 1, skeletal muscle##BC012597|ACTA1|58|actin, alpha 1, skeletal muscle##BX648545|ACTA1|58|actin, alpha 1, skeletal muscle##J00068|ACTA1|58|actin, alpha 1, skeletal muscle##NM_001100|ACTA1|58|actin, alpha 1, skeletal muscle##NM_145257|C1orf96|126731|chromosome 1 open reading frame 96##BC071609|C1orf96|126731|chromosome 1 open reading frame 96##BC015419|C1orf96|126731|chromosome 1 open reading frame 96##BC039241|C1orf96|126731|chromosome 1 open reading frame 96##DQ894268|NUP133|55746|nucleoporin 133kDa##EU176236|NUP133|55746|nucleoporin 133kDa##AK092339|NUP133|55746|nucleoporin 133kDa##AK314431|NUP133|55746|nucleoporin 133kDa##BC020107|NUP133|55746|nucleoporin 133kDa##AK304861|NUP133|55746|nucleoporin 133kDa##AK001676|NUP133|55746|nucleoporin 133kDa##NM_018230|NUP133|55746|nucleoporin 133kDa##AK304061|NUP133|55746|nucleoporin 133kDa##AB013380|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##BC064930|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##AF216833|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##NM_012089|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10	0.0	
chr12	47069575	47069681	reg1022661.p1	5.702	+	TSC_hg19_v1_chr12_-_46766619 NM_018976	-303025	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-303339	-	NM_001077484 NM_030674	-406421	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	150128	-	TSC_hg19_v1_chr12_+_47473404 BC072670	403769	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	403955	-	NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2	0.057691	
chr13	82061415	82061555	reg1029903.p1	5.702	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-1146421	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-1148443	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-2005930	+	TSC_hg19_v1_chr13_-_84456424 BC051738	2394940	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	2395015	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	4311954	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.99413	CTCF.p2:-4:0.994
chr15	89437628	89437732	reg1026556.p1	5.702	+	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	-90994	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	-255494	+	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	-273110	+	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	1118	-	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	18880	-	BC003610 AK095908 AK222735 AK223182 AK304627 AK310357 AK312640 U58516 AY141974 TSC_hg19_v1_chr15_-_89456611 NM_001114614 NM_005928	18959	-	U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan##BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein##BC003610|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK095908|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK222735|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK223182|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK304627|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK310357|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK312640|MFGE8|4240|milk fat globule-EGF factor 8 protein##U58516|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY141974|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_001114614|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_005928|MFGE8|4240|milk fat globule-EGF factor 8 protein	0.945025	CTCF.p2:-1:0.945
chr5	127213991	127214106	reg1025047.p1	5.702	+	NM_001127385 AB219832 BC071790	-225323	+	NM_001048252 AB219764	-229325	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	-354854	+	TSC_hg19_v1_chr5_-_127418765 AF088062 BX648677 BC036629	204715	-	AK090949 AX746698 TSC_hg19_v1_chr5_-_127419417	205311	-	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	205425	+	NM_001127385|CTXN3|613212|cortexin 3##AB219832|CTXN3|613212|cortexin 3##BC071790|CTXN3|613212|cortexin 3##NM_001048252|CTXN3|613212|cortexin 3##AB219764|CTXN3|613212|cortexin 3##AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1##AF088062|FLJ33630|644873|uncharacterized LOC644873##BX648677|FLJ33630|644873|uncharacterized LOC644873##BC036629|FLJ33630|644873|uncharacterized LOC644873##AK090949|FLJ33630|644873|uncharacterized LOC644873##AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2	0.67373	CTCF.p2:1:0.674
chr10	14602450	14602573	reg1026300.p1	5.701	+	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	-229661	-	TSC_hg19_v1_chr10_-_14050453 AK001072	-552019	-	TSC_hg19_v1_chr10_-_13749648 AK057828	-852822	-	TSC_hg19_v1_chr10_-_14646259 BC064407	43806	-	TSC_hg19_v1_chr10_-_14646423 BC072452	43918	-	AK127413 NM_031453	214384	-	AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##AK001072|FRMD4A|55691|FERM domain containing 4A##AK057828|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B##AK127413|FAM107B|83641|family with sequence similarity 107, member B##NM_031453|FAM107B|83641|family with sequence similarity 107, member B	0.997647	CTCF.p2:-18:0.998
chr1	161068065	161068245	reg1004958.p3	5.701	+	TSC_hg19_v1_chr1_-_161059357 NM_030916	-8787	-	AF426163 CU679709 DQ893504 DQ896483 AF160477 TSC_hg19_v1_chr1_-_161059349 BC010423 AK027753	-8937	-	TSC_hg19_v1_chr1_-_161039761 AK126116 AK126163 NM_001025598 NM_181720	-28396	-	TSC_hg19_v1_chr1_+_161068152 BC032482 NM_001007255 NM_152366 AY601914 BC022077 BC066896 AK093268 AX748022	15	+	AB464064 CU680334 AF151065 AF117237 TSC_hg19_v1_chr1_-_161087828 BC047042 AF165883 AK024531 BC012464 AK315736	19670	-	TSC_hg19_v1_chr1_-_161087839 NM_012394	19697	-	NM_030916|PVRL4|81607|poliovirus receptor-related 4##AF426163|PVRL4|81607|poliovirus receptor-related 4##DQ893504|PVRL4|81607|poliovirus receptor-related 4##DQ896483|PVRL4|81607|poliovirus receptor-related 4##AF160477|PVRL4|81607|poliovirus receptor-related 4##BC010423|PVRL4|81607|poliovirus receptor-related 4##AK027753|PVRL4|81607|poliovirus receptor-related 4##AK126116|ARHGAP30|257106|Rho GTPase activating protein 30##AK126163|ARHGAP30|257106|Rho GTPase activating protein 30##NM_001025598|ARHGAP30|257106|Rho GTPase activating protein 30##NM_181720|ARHGAP30|257106|Rho GTPase activating protein 30##BC032482|KLHDC9|126823|kelch domain containing 9##NM_001007255|KLHDC9|126823|kelch domain containing 9##NM_152366|KLHDC9|126823|kelch domain containing 9##AY601914|KLHDC9|126823|kelch domain containing 9##BC022077|KLHDC9|126823|kelch domain containing 9##BC066896|KLHDC9|126823|kelch domain containing 9##AK093268|KLHDC9|126823|kelch domain containing 9##AF151065|PFDN2|5202|prefoldin subunit 2##AF117237|PFDN2|5202|prefoldin subunit 2##BC047042|PFDN2|5202|prefoldin subunit 2##AF165883|PFDN2|5202|prefoldin subunit 2##AK024531|PFDN2|5202|prefoldin subunit 2##BC012464|PFDN2|5202|prefoldin subunit 2##AK315736|PFDN2|5202|prefoldin subunit 2##NM_012394|PFDN2|5202|prefoldin subunit 2	0.228291	CTCF.p2:66:0.228
chr19	51600786	51600868	reg1025273.p1	5.701	+	BC114614 NM_022046	-13344	-	AB108823 AB108824 AB451465 AB590885 AY923171 AY923172 AY923173 BC069334 BC069543 NM_015596 AL050220	-32482	-	AY358524 BC136341 BC143988 BC143990 BC143991 NM_019598 NM_145894 NM_145895	-62756	-	TSC_hg19_v1_chr19_-_51611637 AK291173 NM_145232	10814	-	NM_001198558 NM_014441 AF227924 AK297043 BC035365 AB026265 AY358913 AK315272 AF247180 DQ892476 DQ895688	27392	+	TSC_hg19_v1_chr19_+_51645559 NM_014385 NM_016543 AK314875 AF193441 BC028150 AJ007395 AF178981 AF170485 AJ130710 AJ130711 AJ130712 AJ130713	44764	+	BC114614|KLK14|43847|kallikrein-related peptidase 14##NM_022046|KLK14|43847|kallikrein-related peptidase 14##AB108823|KLK13|26085|kallikrein-related peptidase 13##AB108824|KLK13|26085|kallikrein-related peptidase 13##AB451465|KLK13|26085|kallikrein-related peptidase 13##AY923171|KLK13|26085|kallikrein-related peptidase 13##AY923172|KLK13|26085|kallikrein-related peptidase 13##AY923173|KLK13|26085|kallikrein-related peptidase 13##BC069334|KLK13|26085|kallikrein-related peptidase 13##BC069543|KLK13|26085|kallikrein-related peptidase 13##NM_015596|KLK13|26085|kallikrein-related peptidase 13##AL050220|KLK13|26085|kallikrein-related peptidase 13##AY358524|KLK12|43849|kallikrein-related peptidase 12##BC136341|KLK12|43849|kallikrein-related peptidase 12##BC143988|KLK12|43849|kallikrein-related peptidase 12##BC143990|KLK12|43849|kallikrein-related peptidase 12##BC143991|KLK12|43849|kallikrein-related peptidase 12##NM_019598|KLK12|43849|kallikrein-related peptidase 12##NM_145894|KLK12|43849|kallikrein-related peptidase 12##NM_145895|KLK12|43849|kallikrein-related peptidase 12##AK291173|CTU1|90353|cytosolic thiouridylase subunit 1 homolog (S. pombe)##NM_145232|CTU1|90353|cytosolic thiouridylase subunit 1 homolog (S. pombe)##NM_001198558|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##NM_014441|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AF227924|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK297043|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##BC035365|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AB026265|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AY358913|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK315272|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AF247180|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##DQ892476|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##DQ895688|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##NM_014385|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##NM_016543|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AK314875|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF193441|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##BC028150|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ007395|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF178981|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF170485|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130710|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130711|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130712|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130713|SIGLEC7|27036|sialic acid binding Ig-like lectin 7	1.012491	CTCF.p2:5:1.000
chr5	141967055	141967163	reg1024105.p1	5.701	+	TSC_hg19_v1_chr5_-_141704587 AK096464 NM_001127496 NM_030964	-262475	-	BC125095 BC125096 TSC_hg19_v1_chr5_-_141704555 AF227516 AF227517	-262589	-	TSC_hg19_v1_chr5_+_141488389 AB097010 AB097037 BC004317	-478699	+	S67291 S67292 S67294 AB528663 X65778 X65779 M13361 NM_033137 X51943	26599	-	L01487 BC032697 NM_001144892	33793	-	M60516 NM_000800	98510	-	AK096464|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_001127496|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_030964|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125095|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125096|SPRY4|81848|sprouty homolog 4 (Drosophila)##AF227516|SPRY4|81848|sprouty homolog 4 (Drosophila)##AB097010|NDFIP1|80762|Nedd4 family interacting protein 1##AB097037|NDFIP1|80762|Nedd4 family interacting protein 1##BC004317|NDFIP1|80762|Nedd4 family interacting protein 1##S67291|FGF1|2246|fibroblast growth factor 1 (acidic)##S67292|FGF1|2246|fibroblast growth factor 1 (acidic)##S67294|FGF1|2246|fibroblast growth factor 1 (acidic)##X65778|FGF1|2246|fibroblast growth factor 1 (acidic)##X65779|FGF1|2246|fibroblast growth factor 1 (acidic)##M13361|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)##X51943|FGF1|2246|fibroblast growth factor 1 (acidic)##L01487|FGF1|2246|fibroblast growth factor 1 (acidic)##BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)##M60516|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)	0.990071	CTCF.p2:13:0.990
chr6	125117160	125117271	reg1025135.p1	5.701	+	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	-992011	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	-1159126	-	BC101377 BC101376 NM_001010852	-1799635	+	AK093417 AX748113 BC026087 NM_152553	187296	+	TSC_hg19_v1_chr6_+_125474909 NM_001003396 NM_001003397 NM_003287 AK291866 U44427 BC002375 AK291872 AF208012 AK291887	357724	+	AK124817 NM_001003395	358161	+	NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217##NM_001003396|TPD52L1|7164|tumor protein D52-like 1##NM_001003397|TPD52L1|7164|tumor protein D52-like 1##NM_003287|TPD52L1|7164|tumor protein D52-like 1##AK291866|TPD52L1|7164|tumor protein D52-like 1##U44427|TPD52L1|7164|tumor protein D52-like 1##BC002375|TPD52L1|7164|tumor protein D52-like 1##AK291872|TPD52L1|7164|tumor protein D52-like 1##AF208012|TPD52L1|7164|tumor protein D52-like 1##AK291887|TPD52L1|7164|tumor protein D52-like 1##AK124817|TPD52L1|7164|tumor protein D52-like 1##NM_001003395|TPD52L1|7164|tumor protein D52-like 1	0.966209	CTCF.p2:6:0.966
chr8	134510880	134511004	reg1022687.p1	5.701	+	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-201445	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-307612	+	NM_001045556 NM_001045557	-395633	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	73155	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1197852	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1214137	-	AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr10	115682879	115683025	reg1017257.p1	5.700	+	TSC_hg19_v1_chr10_+_115614419 NM_198514 AK090631 AX746547	-68533	+	D42045 NM_014881 AK307187	-69036	-	BC037870 FJ236306 NM_182601	-158375	+	NM_000684 J03019	120857	+	TSC_hg19_v1_chr10_-_115933963 BC100670 BC103499 BC103504 BC105632 BC152306 BC107430 BC070368 BX537964 AK307517 AK092620 AX747632 BC020842 BC030557	250980	-	NM_018017	251411	-	NM_198514|NHLRC2|374354|NHL repeat containing 2##AK090631|NHLRC2|374354|NHL repeat containing 2##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A##BC037870|C10orf81|79949|chromosome 10 open reading frame 81##FJ236306|C10orf81|79949|chromosome 10 open reading frame 81##NM_182601|C10orf81|79949|chromosome 10 open reading frame 81##NM_000684|ADRB1|153|adrenergic, beta-1-, receptor##J03019|ADRB1|153|adrenergic, beta-1-, receptor##BC100670|C10orf118|55088|chromosome 10 open reading frame 118##BC103499|C10orf118|55088|chromosome 10 open reading frame 118##BC103504|C10orf118|55088|chromosome 10 open reading frame 118##BC105632|C10orf118|55088|chromosome 10 open reading frame 118##BC152306|C10orf118|55088|chromosome 10 open reading frame 118##BC107430|C10orf118|55088|chromosome 10 open reading frame 118##BC070368|C10orf118|55088|chromosome 10 open reading frame 118##BX537964|C10orf118|55088|chromosome 10 open reading frame 118##AK307517|C10orf118|55088|chromosome 10 open reading frame 118##AK092620|C10orf118|55088|chromosome 10 open reading frame 118##BC020842|C10orf118|55088|chromosome 10 open reading frame 118##BC030557|C10orf118|55088|chromosome 10 open reading frame 118##NM_018017|C10orf118|55088|chromosome 10 open reading frame 118	0.114247	
chr11	22752001	22752116	reg1025726.p1	5.700	+	TSC_hg19_v1_chr11_+_22696382 CU680566 AB590780 CR450285	-55660	+	NM_005256 TSC_hg19_v1_chr11_+_22696327 U95032	-55722	+	BC013326 BC040470 NM_177553	-62405	+	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	99287	-	NM_001195637	129913	-	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	1766591	+	CR450285|GAS2|2620|growth arrest-specific 2##NM_005256|GAS2|2620|growth arrest-specific 2##U95032|GAS2|2620|growth arrest-specific 2##BC013326|GAS2|2620|growth arrest-specific 2##BC040470|GAS2|2620|growth arrest-specific 2##NM_177553|GAS2|2620|growth arrest-specific 2##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2	0.651285	CTCF.p2:12:0.651
chr11	59197379	59197487	reg1003129.p1	5.700	+	NM_001001954 BC136991	-6997	-	BC140917 NM_001004729	-65526	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	-217026	-	BC137060 BC137061 NM_001004728	13195	+	BC137028 BC137029 NM_001004708	26988	+	BC136893 BC136894 NM_001004705	47440	+	NM_001001954|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC136991|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1##BC137060|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1##BC137061|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1##NM_001004728|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1##BC137028|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6##BC137029|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6##NM_001004708|OR4D6|219983|olfactory receptor, family 4, subfamily D, member 6##BC136893|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##BC136894|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##NM_001004705|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10	0.0	
chr6	35383099	35383221	reg1023213.p1	5.700	+	TSC_hg19_v1_chr6_+_35310402 AK304482 L07592	-72751	+	TSC_hg19_v1_chr6_+_35310375 AK304878 AB099507 AK296425 AK291661 BC002715 BC007578	-72784	+	TSC_hg19_v1_chr6_+_35310339 AK122614	-72821	+	TSC_hg19_v1_chr6_+_35420129 AK292522 BC046359 AF265210 NM_021922	36968	+	AK312617 TSC_hg19_v1_chr6_+_35420152	36995	+	NM_007104 TSC_hg19_v1_chr6_+_35436179 AK313181 AB055764 BC070216	53023	+	AK304482|PPARD|5467|peroxisome proliferator-activated receptor delta##L07592|PPARD|5467|peroxisome proliferator-activated receptor delta##AK304878|PPARD|5467|peroxisome proliferator-activated receptor delta##AB099507|PPARD|5467|peroxisome proliferator-activated receptor delta##AK296425|PPARD|5467|peroxisome proliferator-activated receptor delta##AK291661|PPARD|5467|peroxisome proliferator-activated receptor delta##BC002715|PPARD|5467|peroxisome proliferator-activated receptor delta##BC007578|PPARD|5467|peroxisome proliferator-activated receptor delta##AK122614|PPARD|5467|peroxisome proliferator-activated receptor delta##AK292522|FANCE|2178|Fanconi anemia, complementation group E##BC046359|FANCE|2178|Fanconi anemia, complementation group E##AF265210|FANCE|2178|Fanconi anemia, complementation group E##NM_021922|FANCE|2178|Fanconi anemia, complementation group E##AK312617|FANCE|2178|Fanconi anemia, complementation group E##NM_007104|RPL10A|4736|ribosomal protein L10a##AK313181|RPL10A|4736|ribosomal protein L10a##BC070216|RPL10A|4736|ribosomal protein L10a	0.0	
chr7	134043106	134043223	reg1024683.p2	5.700	+	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	-41377	-	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	-41541	-	BC104897 BC104899 AK057348 NM_144648	-231087	+	TSC_hg19_v1_chr7_-_134143853 AB209796 BT019859 CR450351 CR542203 CU675153 J04795 DQ890758 DQ892546 DQ893921 DQ895757 M34720 AF328729 J05474 J05017 BC010391 BC005387 X15414	100669	-	TSC_hg19_v1_chr7_-_134143878 AK313439 BC000260 NM_001628 AK311339	100800	-	AF524864 NM_020299 BC008837	169206	+	AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AB209796|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BT019859|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR450351|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR542203|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J04795|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ890758|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ892546|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ893921|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ895757|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##M34720|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF328729|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05474|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05017|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC010391|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC005387|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##X15414|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK313439|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC000260|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001628|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK311339|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)	0.993446	CTCF.p2:16:0.993
chr12	39837048	39837159	reg1024096.p2	5.699	+	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	-104	-	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	-537720	-	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-1126478	+	AK314254 NM_005164	176739	-	BC038754 NM_001031748 BC048120 AK097445	182892	+	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	662586	-	AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13	0.02538	
chr15	90844562	90844688	reg1022381.p2	5.699	+	TSC_hg19_v1_chr15_+_90808921 AB029315 NM_001033088 AL834503 BC007222 AL360142 AK312641 BC017192 BC019023 AF242770 AL355700 BC009389 BC096824 AF225423	-35705	+	TSC_hg19_v1_chr15_+_90792763 BC036668 NM_001029964 AK127965 BC052201	-51850	+	TSC_hg19_v1_chr15_+_90777469 BC127821 NM_001013657	-67151	+	AK289385 NM_001004309 BC067279 CR749343	50898	+	BC151834 D29640 TSC_hg19_v1_chr15_+_90931449	86829	+	TSC_hg19_v1_chr15_+_90931479 NM_003870	86852	+	AB029315|NGRN|51335|neugrin, neurite outgrowth associated##NM_001033088|NGRN|51335|neugrin, neurite outgrowth associated##AL834503|NGRN|51335|neugrin, neurite outgrowth associated##BC007222|NGRN|51335|neugrin, neurite outgrowth associated##AL360142|NGRN|51335|neugrin, neurite outgrowth associated##AK312641|NGRN|51335|neugrin, neurite outgrowth associated##BC017192|NGRN|51335|neugrin, neurite outgrowth associated##BC019023|NGRN|51335|neugrin, neurite outgrowth associated##AF242770|NGRN|51335|neugrin, neurite outgrowth associated##AL355700|NGRN|51335|neugrin, neurite outgrowth associated##BC009389|NGRN|51335|neugrin, neurite outgrowth associated##BC096824|NGRN|51335|neugrin, neurite outgrowth associated##AF225423|NGRN|51335|neugrin, neurite outgrowth associated##BC036668|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##NM_001029964|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##AK127965|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##BC127821|C15orf58|390637|chromosome 15 open reading frame 58##NM_001013657|C15orf58|390637|chromosome 15 open reading frame 58##AK289385|ZNF774|342132|zinc finger protein 774##NM_001004309|ZNF774|342132|zinc finger protein 774##BC067279|ZNF774|342132|zinc finger protein 774##CR749343|ZNF774|342132|zinc finger protein 774##BC151834|IQGAP1|8826|IQ motif containing GTPase activating protein 1##D29640|IQGAP1|8826|IQ motif containing GTPase activating protein 1##NM_003870|IQGAP1|8826|IQ motif containing GTPase activating protein 1	1.122922	CTCF.p2:-3:0.999
chr4	177045024	177045149	reg1020139.p1	5.699	+	TSC_hg19_v1_chr4_+_176987148 BC118549 BC118627 AK098748 DQ426895 DQ426896	-57917	+	BC146812 NM_170710 NM_181265 AF492460 TSC_hg19_v1_chr4_+_176987137	-58025	+	TSC_hg19_v1_chr4_-_176923575 NM_005277 NM_201592	-121477	-	CU692400 TSC_hg19_v1_chr4_-_177116722 BC021731 BC029428 AY040204 NM_144644	71681	-	AY057053 CU688084 AK096441 BC065710 BX647857 NM_080874	145229	-	TSC_hg19_v1_chr4_+_177241098 NM_021928	195967	+	BC118549|WDR17|116966|WD repeat domain 17##BC118627|WDR17|116966|WD repeat domain 17##AK098748|WDR17|116966|WD repeat domain 17##DQ426895|WDR17|116966|WD repeat domain 17##DQ426896|WDR17|116966|WD repeat domain 17##BC146812|WDR17|116966|WD repeat domain 17##NM_170710|WDR17|116966|WD repeat domain 17##NM_181265|WDR17|116966|WD repeat domain 17##AF492460|WDR17|116966|WD repeat domain 17##NM_005277|GPM6A|2823|glycoprotein M6A##NM_201592|GPM6A|2823|glycoprotein M6A##BC021731|SPATA4|132851|spermatogenesis associated 4##BC029428|SPATA4|132851|spermatogenesis associated 4##AY040204|SPATA4|132851|spermatogenesis associated 4##NM_144644|SPATA4|132851|spermatogenesis associated 4##AY057053|ASB5|140458|ankyrin repeat and SOCS box containing 5##AK096441|ASB5|140458|ankyrin repeat and SOCS box containing 5##BC065710|ASB5|140458|ankyrin repeat and SOCS box containing 5##BX647857|ASB5|140458|ankyrin repeat and SOCS box containing 5##NM_080874|ASB5|140458|ankyrin repeat and SOCS box containing 5##NM_021928|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)	0.912876	CTCF.p2:-18:0.913
chr6	150328363	150328465	reg1023316.p2	5.699	+	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	-43252	+	AK299895 AB052906 NM_025217 TSC_hg19_v1_chr6_+_150263162 AX772820 BC034689 AY358665 AF304378 AY026825 CU689938	-65250	+	AY172580 BC096719 BC098152 AY172579 NM_001001788 AK310157	-84214	-	BC131600 AB528849 AY039682 NM_130900	18219	-	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	61799	-	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	135827	+	AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##AK299895|ULBP2|80328|UL16 binding protein 2##AB052906|ULBP2|80328|UL16 binding protein 2##NM_025217|ULBP2|80328|UL16 binding protein 2##AX772820|ULBP2|80328|UL16 binding protein 2##BC034689|ULBP2|80328|UL16 binding protein 2##AY358665|ULBP2|80328|UL16 binding protein 2##AF304378|ULBP2|80328|UL16 binding protein 2##AY026825|ULBP2|80328|UL16 binding protein 2##AY172580|RAET1G|353091|retinoic acid early transcript 1G##BC096719|RAET1G|353091|retinoic acid early transcript 1G##BC098152|RAET1G|353091|retinoic acid early transcript 1G##AY172579|RAET1G|353091|retinoic acid early transcript 1G##NM_001001788|RAET1G|353091|retinoic acid early transcript 1G##AK310157|RAET1G|353091|retinoic acid early transcript 1G##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L##AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C	0.985542	CTCF.p2:38:0.986
chr6	52860027	52860174	reg1025195.p1	5.699	+	AF020919 BC020619 NM_000847	-85623	-	NM_153699	-149208	-	BC053578 BC110891 M15872 TSC_hg19_v1_chr6_-_52668615 AK293371 M14777 M21758 M25627 NM_145740 AK310324	-191419	-	AK315369 TSC_hg19_v1_chr6_-_52860078 AF020918 AF025887 BC096817 NM_001512	27	-	AB023153 BC152464 TSC_hg19_v1_chr6_-_52926579 AF152469 AK074892	66432	-	TSC_hg19_v1_chr6_-_52926623 NM_014920 NM_016513	66535	-	AF020919|GSTA3|2940|glutathione S-transferase alpha 3##BC020619|GSTA3|2940|glutathione S-transferase alpha 3##NM_000847|GSTA3|2940|glutathione S-transferase alpha 3##NM_153699|GSTA5|221357|glutathione S-transferase alpha 5##BC053578|GSTA1|2938|glutathione S-transferase alpha 1##BC110891|GSTA1|2938|glutathione S-transferase alpha 1##M15872|GSTA1|2938|glutathione S-transferase alpha 1##AK293371|GSTA1|2938|glutathione S-transferase alpha 1##M14777|GSTA1|2938|glutathione S-transferase alpha 1##M21758|GSTA1|2938|glutathione S-transferase alpha 1##M25627|GSTA1|2938|glutathione S-transferase alpha 1##NM_145740|GSTA1|2938|glutathione S-transferase alpha 1##AK310324|GSTA1|2938|glutathione S-transferase alpha 1##AK315369|GSTA4|2941|glutathione S-transferase alpha 4##AF020918|GSTA4|2941|glutathione S-transferase alpha 4##AF025887|GSTA4|2941|glutathione S-transferase alpha 4##BC096817|GSTA4|2941|glutathione S-transferase alpha 4##NM_001512|GSTA4|2941|glutathione S-transferase alpha 4##AB023153|ICK|22858|intestinal cell (MAK-like) kinase##BC152464|ICK|22858|intestinal cell (MAK-like) kinase##AF152469|ICK|22858|intestinal cell (MAK-like) kinase##AK074892|ICK|22858|intestinal cell (MAK-like) kinase##NM_014920|ICK|22858|intestinal cell (MAK-like) kinase##NM_016513|ICK|22858|intestinal cell (MAK-like) kinase	0.151827	
chr11	451055	451150	reg1025366.p1	5.698	+	TSC_hg19_v1_chr11_+_450413 DQ891743 DQ894922 CU674608	-662	+	AK311723 TSC_hg19_v1_chr11_+_450363 AK307374 AL834357	-731	+	TSC_hg19_v1_chr11_+_450299 BC001210 NM_030783	-806	+	AK311379 TSC_hg19_v1_chr11_-_506769 BC003506 BC024037 AK308340 M36717 X13973 BC047730 NM_002939 NM_203383 NM_203384 NM_203385	55678	-	TSC_hg19_v1_chr11_-_507225 BC003075 BC000677 BC014629 AK310173 BC011500 M22414	56102	-	TSC_hg19_v1_chr11_-_507243 NM_203386 NM_203387 NM_203388 NM_203389	56163	-	DQ891743|PTDSS2|81490|phosphatidylserine synthase 2##DQ894922|PTDSS2|81490|phosphatidylserine synthase 2##AK311723|PTDSS2|81490|phosphatidylserine synthase 2##AL834357|PTDSS2|81490|phosphatidylserine synthase 2##BC001210|PTDSS2|81490|phosphatidylserine synthase 2##NM_030783|PTDSS2|81490|phosphatidylserine synthase 2##AK311379|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC003506|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC024037|RNH1|6050|ribonuclease/angiogenin inhibitor 1##AK308340|RNH1|6050|ribonuclease/angiogenin inhibitor 1##M36717|RNH1|6050|ribonuclease/angiogenin inhibitor 1##X13973|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC047730|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_002939|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203383|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203384|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203385|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC000677|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC014629|RNH1|6050|ribonuclease/angiogenin inhibitor 1##AK310173|RNH1|6050|ribonuclease/angiogenin inhibitor 1##BC011500|RNH1|6050|ribonuclease/angiogenin inhibitor 1##M22414|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203386|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203387|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203388|RNH1|6050|ribonuclease/angiogenin inhibitor 1##NM_203389|RNH1|6050|ribonuclease/angiogenin inhibitor 1	0.010084	
chr19	58313831	58313945	reg1025102.p2	5.698	+	BC051325 TSC_hg19_v1_chr19_+_58281063 AK300419 BC124558 BC041660 AB527919	-32759	+	AK302151 TSC_hg19_v1_chr19_+_58281007 NM_001077426 NM_001204814 NM_017652 AK095993 BC027922 AK000077 AB074270	-32871	+	TSC_hg19_v1_chr19_+_58258208 BX957217 CR749390 CR936802 AK055448	-55676	+	AK097041 AK293445 NM_024762	12392	-	TSC_hg19_v1_chr19_+_58331098 AK095812 AK303856 U71363	17199	+	AK122919 NM_001204818 AK299091	27782	+	BC051325|ZNF586|54807|zinc finger protein 586##AK300419|ZNF586|54807|zinc finger protein 586##BC124558|ZNF586|54807|zinc finger protein 586##BC041660|ZNF586|54807|zinc finger protein 586##AK302151|ZNF586|54807|zinc finger protein 586##NM_001077426|ZNF586|54807|zinc finger protein 586##NM_001204814|ZNF586|54807|zinc finger protein 586##NM_017652|ZNF586|54807|zinc finger protein 586##AK095993|ZNF586|54807|zinc finger protein 586##BC027922|ZNF586|54807|zinc finger protein 586##AK000077|ZNF586|54807|zinc finger protein 586##AB074270|ZNF586|54807|zinc finger protein 586##BX957217|ZNF776|284309|zinc finger protein 776##CR749390|ZNF776|284309|zinc finger protein 776##CR936802|ZNF776|284309|zinc finger protein 776##AK097041|ZNF552|79818|zinc finger protein 552##AK293445|ZNF552|79818|zinc finger protein 552##NM_024762|ZNF552|79818|zinc finger protein 552##U71363|LOC100293516|100293516|zinc finger protein##NM_001204818|LOC100293516|100293516|zinc finger protein##AK299091|LOC100293516|100293516|zinc finger protein	0.028622	
chr6	132236436	132236560	reg1024032.p1	5.698	+	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-107237	+	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	-107337	+	NM_001145659	-204342	-	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	35916	-	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	486118	-	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	597752	-	BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_001145659|CTAGE9|643854|CTAGE family, member 9##BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7	0.999671	CTCF.p2:-10:1.000
chr7	38393977	38394086	reg1024875.p1	5.698	+	TSC_hg19_v1_chr7_-_38389583 BC035592	-4442	-	Y00482 TSC_hg19_v1_chr7_-_38389512	-4555	-	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	-18827	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	276931	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	277046	-	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	554762	-	BC035592|TRGV5|6978|T cell receptor gamma variable 5##BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)	0.998956	CTCF.p2:26:0.999
chr11	104665383	104665506	reg1025536.p2	5.697	+	TSC_hg19_v1_chr11_-_104035100 BC030645	-630344	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	-630404	-	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	-630650	-	AF464191 AF464192 AF464193 AF464194 AF464195 AF486844 AF486845 AF486846 AF486847 NM_001191016	103952	-	NM_033306 U28977 U28978	161977	-	TSC_hg19_v1_chr11_-_104839279 U28979 BC008060 U28976 BC017839 U28014 AK225751 Z48810 U25804 AK296081 AK304222 NM_001225	173853	-	BC030645|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##AF464191|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464192|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464193|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464194|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464195|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486844|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486845|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486846|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486847|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_001191016|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_033306|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28977|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28978|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28979|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC008060|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28976|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC017839|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28014|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK225751|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##Z48810|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U25804|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK296081|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK304222|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##NM_001225|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	0.047066	
chr17	62962190	62962354	reg1017349.p2	5.697	+	TSC_hg19_v1_chr17_-_62915587 AK294371	-46676	-	AB011135 NM_199340	-47370	-	AB384498 TSC_hg19_v1_chr17_-_62893379 BC043145 BC048966	-68881	-	TSC_hg19_v1_chr17_-_62971685 BX537538 AK056627 BC063466 AK311317	9348	-	TSC_hg19_v1_chr17_-_63009302 AK026902	47034	-	TSC_hg19_v1_chr17_-_63052724 AB528470 AF493902 CU691408 DQ893572 DQ894448 AK313672	90446	-	AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3##NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC043145|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC048966|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BX537538|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK056627|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##BC063466|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK311317|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AF493902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ893572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ894448|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AK313672|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	0.096265	
chr20	49410238	49410344	reg1024651.p1	5.697	+	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	-62222	+	TSC_hg19_v1_chr20_-_49308074 AK124347	-102214	-	AK056792 NM_080829	-156866	-	AF361220 NM_001010974 NM_017843 NM_198799 TSC_hg19_v1_chr20_+_49411542 AK000502 BC038381 BC047337 AJ511266 BC056883	1227	+	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	137432	-	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	164772	-	BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##AF361220|BCAS4|55653|breast carcinoma amplified sequence 4##NM_001010974|BCAS4|55653|breast carcinoma amplified sequence 4##NM_017843|BCAS4|55653|breast carcinoma amplified sequence 4##NM_198799|BCAS4|55653|breast carcinoma amplified sequence 4##AK000502|BCAS4|55653|breast carcinoma amplified sequence 4##BC038381|BCAS4|55653|breast carcinoma amplified sequence 4##BC047337|BCAS4|55653|breast carcinoma amplified sequence 4##AJ511266|BCAS4|55653|breast carcinoma amplified sequence 4##BC056883|BCAS4|55653|breast carcinoma amplified sequence 4##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit	0.156129	
chrX	57955965	57956086	reg1027735.p1	5.697	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-19066	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-337565	+	NM_007157	-337757	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	4615174	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	4692242	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	4824842	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.969214	CTCF.p2:-13:0.969
chr11	72395685	72395782	reg1017032.p3	5.696	+	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	-10280	-	AY495087 NM_001146209	-15626	-	TSC_hg19_v1_chr11_-_72353458 AY495089 AK131525 AK092278 AX747449 NM_001143839 NM_001243784	-42254	-	AB018325 NM_001135190 NM_015242	37657	-	TSC_hg19_v1_chr11_-_72463454 AY553630 NM_001040118	67733	-	AB209473 AK095668 BC035482 BC007919 BC014033 AK310301 AK315255 NM_006645	108963	-	U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK131525|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK092278|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001143839|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001243784|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AB018325|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_001135190|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_015242|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##AY553630|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##NM_001040118|ARAP1|116985|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1##AK095668|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC035482|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC007919|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC014033|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AK315255|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##NM_006645|STARD10|10809|StAR-related lipid transfer (START) domain containing 10	0.692301	CTCF.p2:22:0.650
chr1	207178428	207178573	reg1023888.p1	5.696	+	AK298394 NM_001122979 NM_001170631 NM_032029	-34544	-	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	-58739	-	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	-83213	-	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	27548	-	TSC_hg19_v1_chr1_-_207224335 AL833081 BC137166 BC137167 NM_018566	45859	-	AK292883 TSC_hg19_v1_chr1_+_207226619 NM_001018053 NM_006212 AJ005578 AF470623 AB044805 BC112103 BC112105 BC069350 BC069385 BC069583 BC069586 BC069600 BC075075 BC075076	48137	+	AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116##AL833081|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137166|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137167|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##NM_018566|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##AK292883|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_001018053|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_006212|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AJ005578|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AF470623|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AB044805|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112103|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112105|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069350|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069385|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069583|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069586|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069600|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075075|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075076|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	0.881915	CTCF.p2:22:0.882
chr2	220217281	220217396	reg1024784.p1	5.696	+	AF437883 NM_001007089	-19440	-	TSC_hg19_v1_chr2_-_220174202 AK291469 NM_001199763 NM_002846	-43091	-	AK314574 TSC_hg19_v1_chr2_-_220174093 AK294490 BC070053 L18983	-43235	-	AK021871 AB463418 DQ891937 DQ895124 TSC_hg19_v1_chr2_-_220252539 BC000653	35196	-	TSC_hg19_v1_chr2_-_220252614 AK023005	35259	-	TSC_hg19_v1_chr2_-_220252652 AF005050 AK001977 AK302809 AK001777 NM_012100	35307	-	AF437883|RESP18|389075|regulated endocrine-specific protein 18 homolog (rat)##NM_001007089|RESP18|389075|regulated endocrine-specific protein 18 homolog (rat)##AK291469|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##NM_001199763|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##NM_002846|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK314574|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK294490|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##BC070053|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##L18983|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK021871|DNPEP|23549|aspartyl aminopeptidase##DQ891937|DNPEP|23549|aspartyl aminopeptidase##DQ895124|DNPEP|23549|aspartyl aminopeptidase##BC000653|DNPEP|23549|aspartyl aminopeptidase##AK023005|DNPEP|23549|aspartyl aminopeptidase##AF005050|DNPEP|23549|aspartyl aminopeptidase##AK001977|DNPEP|23549|aspartyl aminopeptidase##AK302809|DNPEP|23549|aspartyl aminopeptidase##AK001777|DNPEP|23549|aspartyl aminopeptidase##NM_012100|DNPEP|23549|aspartyl aminopeptidase	0.873008	CTCF.p2:13:0.873
chrX	62429637	62429765	reg1024772.p2	5.696	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-4492742	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-4811241	+	NM_007157	-4811433	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	141498	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	218566	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	351166	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.808098	CTCF.p2:17:0.808
chr10	5136976	5137156	reg1023612.p2	5.695	+	BC019230 TSC_hg19_v1_chr10_+_5136613 S68288 AF149416 AM392923 BT007286 CU674730 CU676394 DQ890679 DQ893860 GQ129450 GQ129451	-433	+	TSC_hg19_v1_chr10_+_5136605 AB018580 AK296701 AK290365 AK315411 AK310940	-467	+	TSC_hg19_v1_chr10_+_5136567 NM_003739 BC001479 D17793	-496	+	AK314988 BC020744 NM_001818 TSC_hg19_v1_chr10_+_5238799 S68287 AB031085 AB045829 CU676682 DQ891424 DQ894598 M33375 D26125	101729	+	NM_053049 BC100867 BC100868 BC100869 BC100870	269948	+	TSC_hg19_v1_chr10_-_5446792 BC098247 BC099716 BC105634 AK296616 AK025318 NM_001171864 NM_024803	309722	-	BC019230|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68288|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AF149416|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AM392923|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##BT007286|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##DQ890679|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##DQ893860|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##GQ129450|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##GQ129451|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AB018580|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK290365|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK315411|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK310940|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##NM_003739|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##BC001479|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##D17793|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK314988|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##BC020744|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##NM_001818|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##S68287|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##AB031085|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##AB045829|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##DQ891424|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##DQ894598|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##M33375|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##D26125|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##NM_053049|UCN3|114131|urocortin 3 (stresscopin)##BC100867|UCN3|114131|urocortin 3 (stresscopin)##BC100868|UCN3|114131|urocortin 3 (stresscopin)##BC100869|UCN3|114131|urocortin 3 (stresscopin)##BC100870|UCN3|114131|urocortin 3 (stresscopin)##BC098247|TUBAL3|79861|tubulin, alpha-like 3##BC099716|TUBAL3|79861|tubulin, alpha-like 3##BC105634|TUBAL3|79861|tubulin, alpha-like 3##AK296616|TUBAL3|79861|tubulin, alpha-like 3##AK025318|TUBAL3|79861|tubulin, alpha-like 3##NM_001171864|TUBAL3|79861|tubulin, alpha-like 3##NM_024803|TUBAL3|79861|tubulin, alpha-like 3	0.941414	CTCF.p2:-46:0.941
chr2	228631284	228631432	reg1003173.p2	5.695	+	AF271633 BC032014 AK301490 AF283317 AK312464 NM_025243	-48637	-	AM393148 AM393273 BC131618 AL359944 CR749679 AK055355 NM_001162483 NM_020161	-133440	-	TSC_hg19_v1_chr2_+_228356287 AK295030	-275067	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	47233	+	AK097409 NM_178821 BC036377 AK098821 AK301861	104994	+	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	415004	-	AF271633|SLC19A3|80704|solute carrier family 19, member 3##BC032014|SLC19A3|80704|solute carrier family 19, member 3##AK301490|SLC19A3|80704|solute carrier family 19, member 3##AF283317|SLC19A3|80704|solute carrier family 19, member 3##AK312464|SLC19A3|80704|solute carrier family 19, member 3##NM_025243|SLC19A3|80704|solute carrier family 19, member 3##AM393148|C2orf83|56918|chromosome 2 open reading frame 83##AM393273|C2orf83|56918|chromosome 2 open reading frame 83##BC131618|C2orf83|56918|chromosome 2 open reading frame 83##AL359944|C2orf83|56918|chromosome 2 open reading frame 83##CR749679|C2orf83|56918|chromosome 2 open reading frame 83##AK055355|C2orf83|56918|chromosome 2 open reading frame 83##NM_001162483|C2orf83|56918|chromosome 2 open reading frame 83##NM_020161|C2orf83|56918|chromosome 2 open reading frame 83##AK295030|AGFG1|3267|ArfGAP with FG repeats 1##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing	0.0	
chr4	1914874	1914982	reg1024750.p1	5.695	+	AF071593 AF071594 NM_133334 AY694128 AB384560	-12562	+	AF083386 AF083387 AF083388 AF083389 AF083390 AF083391 NM_007331 NM_133330 NM_133331 NM_133335	-20420	+	TSC_hg19_v1_chr4_+_1873169 BC052254 BC020545 BC032731	-41730	+	AB029013 TSC_hg19_v1_chr4_+_1953907	38942	+	AB044549 CU678178 EU831413 EU831506 AF101434 AK094040 TSC_hg19_v1_chr4_-_2010700 AK222853 BC002764	95765	-	TSC_hg19_v1_chr4_-_2010702 AK001304	95797	-	AF071593|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF071594|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133334|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AY694128|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083386|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083387|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083388|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083389|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083390|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083391|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_007331|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133330|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133331|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133335|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AB029013|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AB044549|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##EU831413|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##EU831506|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AF101434|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AK094040|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AK222853|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##BC002764|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AK001304|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2	0.694154	CTCF.p2:4:0.694
chr7	78554021	78554163	reg1025459.p1	5.695	+	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-1084583	+	BC067742 TSC_hg19_v1_chr7_+_77428204 AL136883	-1125882	+	TSC_hg19_v1_chr7_+_77428194 NM_001127358 NM_001127360 AK225854 AK090643 AX746556 AK308289	-1125951	+	AB014605 BC150277 AK297353 AF038563 NM_012301	528787	-	TSC_hg19_v1_chr7_+_79083303 AK311103	529065	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	1210047	+	BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##BC067742|PHTF2|57157|putative homeodomain transcription factor 2##AL136883|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2##AK225854|PHTF2|57157|putative homeodomain transcription factor 2##AK090643|PHTF2|57157|putative homeodomain transcription factor 2##AK308289|PHTF2|57157|putative homeodomain transcription factor 2##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1	0.931691	CTCF.p2:27:0.932
chr9	129079958	129080057	reg1024645.p2	5.695	+	AK309713 NM_001134778	-569530	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-570307	+	TSC_hg19_v1_chr9_-_128469506 AY524429 AY524430 AY524431 AY524432 NM_001006617 NM_001006618 NM_001006619 NM_001006620 NM_001006621 NM_024117	-610488	-	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	9160	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	296754	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	487303	+	AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##AY524429|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524430|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524431|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524432|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006617|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006618|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006619|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006620|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006621|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_024117|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43	0.701659	CTCF.p2:4:0.702
chrX	62388530	62388661	reg1024783.p1	5.695	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-4451636	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-4770135	+	NM_007157	-4770327	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	182604	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	259672	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	392272	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.808098	CTCF.p2:-18:0.808
chrY	26459415	26459495	reg1024996.p1	5.695	+	AF000981 AF080597 AK292318 BC033041 NM_001003894 NM_001003895 NM_004680 NM_170723 AK292375	-265307	-	NM_020364 NM_020420 AK302690 NM_001005785 NM_001005786 NM_020363 AF414184 BC047480 AK302398 BC036648 BC047617 U21663 AF248480 AF248481 BC113005 BC113006	-1093768	+	BC114927 AF248482 BC047617 U21663 BC047480 NM_004081 NM_001005375 NM_020420	-1114294	-	AF000980 NM_001002760 NM_001002761 NM_004678	304695	+	BC113005 BC047617 BC047480 NM_020364 NM_020420	500075	-	NM_001005375 NM_020364 NM_020420 NM_001005785 NM_001005786 AF414184 BC047480 BC036648 BC047617 U21663 AF248480 AF248482 AF248481 BC113005 BC113006	520618	+	AF000981|CDY1|9085|chromodomain protein, Y-linked, 1##AF080597|CDY1|9085|chromodomain protein, Y-linked, 1##AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B##BC033041|CDY1|9085|chromodomain protein, Y-linked, 1##NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1##NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1##AK292375|CDY1|9085|chromodomain protein, Y-linked, 1##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##AK302690|DAZ2|57055|deleted in azoospermia 2##NM_001005785|DAZ2|57055|deleted in azoospermia 2##NM_001005786|DAZ2|57055|deleted in azoospermia 2##NM_020363|DAZ2|57055|deleted in azoospermia 2##AF414184|DAZ2|57055|deleted in azoospermia 2##BC047480|DAZ4|57135|deleted in azoospermia 4##AK302398|DAZ2|57055|deleted in azoospermia 2##BC036648|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##U21663|DAZ2|57055|deleted in azoospermia 2##AF248480|DAZ2|57055|deleted in azoospermia 2##AF248481|DAZ3|57054|deleted in azoospermia 3##BC113005|DAZ3|57054|deleted in azoospermia 3##BC113006|DAZ2|57055|deleted in azoospermia 2##BC114927|DAZ1|1617|deleted in azoospermia 1##AF248482|DAZ4|57135|deleted in azoospermia 4##BC047617|DAZ4|57135|deleted in azoospermia 4##U21663|DAZ2|57055|deleted in azoospermia 2##BC047480|DAZ4|57135|deleted in azoospermia 4##NM_004081|DAZ1|1617|deleted in azoospermia 1##NM_001005375|DAZ4|57135|deleted in azoospermia 4##NM_020420|DAZ4|57135|deleted in azoospermia 4##AF000980|BPY2|9083|basic charge, Y-linked, 2##NM_001002760|BPY2B|442867|basic charge, Y-linked, 2B##NM_001002761|BPY2C|442868|basic charge, Y-linked, 2C##NM_004678|BPY2|9083|basic charge, Y-linked, 2##BC113005|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##BC047480|DAZ4|57135|deleted in azoospermia 4##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##NM_001005375|DAZ4|57135|deleted in azoospermia 4##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##NM_001005785|DAZ2|57055|deleted in azoospermia 2##NM_001005786|DAZ2|57055|deleted in azoospermia 2##AF414184|DAZ2|57055|deleted in azoospermia 2##BC047480|DAZ4|57135|deleted in azoospermia 4##BC036648|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##U21663|DAZ2|57055|deleted in azoospermia 2##AF248480|DAZ2|57055|deleted in azoospermia 2##AF248482|DAZ4|57135|deleted in azoospermia 4##AF248481|DAZ3|57054|deleted in azoospermia 3##BC113005|DAZ3|57054|deleted in azoospermia 3##BC113006|DAZ2|57055|deleted in azoospermia 2	0.973166	CTCF.p2:-4:0.973
chr2	32111902	32111999	reg1022434.p2	5.694	+	EU832809 GQ129244 HQ258121 M74047 EF560740 AK316597 BC112252 BC113641 NM_000348	-305947	-	TSC_hg19_v1_chr2_-_31637599 NM_000379	-474339	-	TSC_hg19_v1_chr2_-_31637569 U39487 D11456 U06117	-474379	-	TSC_hg19_v1_chr2_-_32235713 AF363446 BC018733 NM_001137602 NM_015955	123708	-	TSC_hg19_v1_chr2_-_32235732 AB041018	123778	-	TSC_hg19_v1_chr2_-_32235815 BC070046	123872	-	EU832809|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##GQ129244|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##HQ258121|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##M74047|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##EF560740|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##AK316597|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC112252|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC113641|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000348|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000379|XDH|7498|xanthine dehydrogenase##U39487|XDH|7498|xanthine dehydrogenase##D11456|XDH|7498|xanthine dehydrogenase##U06117|XDH|7498|xanthine dehydrogenase##AF363446|MEMO1|51072|mediator of cell motility 1##BC018733|MEMO1|51072|mediator of cell motility 1##NM_001137602|MEMO1|51072|mediator of cell motility 1##NM_015955|MEMO1|51072|mediator of cell motility 1##AB041018|MEMO1|51072|mediator of cell motility 1##BC070046|MEMO1|51072|mediator of cell motility 1	0.0	
chr4	112996433	112996568	reg1025201.p1	5.694	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1433222	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1438331	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-1452225	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	70114	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	156584	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	210501	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.752065	CTCF.p2:2:0.752
chr4	16200905	16201010	reg1025720.p1	5.694	+	TSC_hg19_v1_chr4_-_16085669 AK027422 AK314529	-115287	-	NM_001145847 AK075411 BC012089 NM_001145848 TSC_hg19_v1_chr4_-_16085647 AK027420 AK226033	-115333	-	TSC_hg19_v1_chr4_-_16085325 AF117225	-115626	-	AF189251 TSC_hg19_v1_chr4_-_16228095 AK074494 AK296104	27126	-	TSC_hg19_v1_chr4_-_16228103 BC066899 NM_153365	27180	-	TSC_hg19_v1_chr4_+_16228285 AK096972 BC132927	27338	+	AK027422|PROM1|8842|prominin 1##AK314529|PROM1|8842|prominin 1##NM_001145847|PROM1|8842|prominin 1##AK075411|PROM1|8842|prominin 1##BC012089|PROM1|8842|prominin 1##NM_001145848|PROM1|8842|prominin 1##AK027420|PROM1|8842|prominin 1##AK226033|PROM1|8842|prominin 1##AF117225|PROM1|8842|prominin 1##AF189251|TAPT1|202018|transmembrane anterior posterior transformation 1##AK074494|TAPT1|202018|transmembrane anterior posterior transformation 1##AK296104|TAPT1|202018|transmembrane anterior posterior transformation 1##BC066899|TAPT1|202018|transmembrane anterior posterior transformation 1##NM_153365|TAPT1|202018|transmembrane anterior posterior transformation 1##AK096972|FLJ39653|202020|uncharacterized FLJ39653##BC132927|FLJ39653|202020|uncharacterized FLJ39653	0.970807	CTCF.p2:3:0.971
chr11	60828746	60828926	reg1022050.p1	5.693	+	NM_006725 TSC_hg19_v1_chr11_+_60739236 AK128419 AK312749 BC078669 BC033755 X60992 AK292704 DQ786329 DQ786330 U66142 U66145 U66146	-89611	+	BC037974 BC025710 AF135600 AB020598 NM_016582	-109650	-	TSC_hg19_v1_chr11_+_60691945 NM_017870 NM_178031 AK000546 BC114569 BC032059	-136901	+	NM_014207 AY541703 TSC_hg19_v1_chr11_+_60869960 AK292698 X04391 BC027901 DQ892077 DQ895270	41143	+	BC141827 BC142702 AK097326 TSC_hg19_v1_chr11_-_60928910 NM_017966 AL834261 AK302384	100094	-	NM_001079807 AK301286 AK301293 AK301305 AK312941 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	142172	+	NM_006725|CD6|923|CD6 molecule##AK128419|CD6|923|CD6 molecule##AK312749|CD6|923|CD6 molecule##BC078669|CD6|923|CD6 molecule##BC033755|CD6|923|CD6 molecule##X60992|CD6|923|CD6 molecule##AK292704|CD6|923|CD6 molecule##DQ786329|CD6|923|CD6 molecule##DQ786330|CD6|923|CD6 molecule##U66142|CD6|923|CD6 molecule##U66145|CD6|923|CD6 molecule##U66146|CD6|923|CD6 molecule##BC037974|SLC15A3|51296|solute carrier family 15, member 3##BC025710|SLC15A3|51296|solute carrier family 15, member 3##AF135600|SLC15A3|51296|solute carrier family 15, member 3##AB020598|SLC15A3|51296|solute carrier family 15, member 3##NM_016582|SLC15A3|51296|solute carrier family 15, member 3##NM_017870|TMEM132A|54972|transmembrane protein 132A##NM_178031|TMEM132A|54972|transmembrane protein 132A##AK000546|TMEM132A|54972|transmembrane protein 132A##BC114569|TMEM132A|54972|transmembrane protein 132A##BC032059|TMEM132A|54972|transmembrane protein 132A##NM_014207|CD5|921|CD5 molecule##AY541703|CD5|921|CD5 molecule##AK292698|CD5|921|CD5 molecule##X04391|CD5|921|CD5 molecule##BC027901|CD5|921|CD5 molecule##DQ892077|CD5|921|CD5 molecule##DQ895270|CD5|921|CD5 molecule##BC141827|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##BC142702|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK097326|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_017966|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AL834261|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK302384|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_001079807|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301286|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301293|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)	0.0	
chr17	63790754	63790857	reg1021983.p1	5.693	+	CR933657 TSC_hg19_v1_chr17_-_63557767	-233037	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	-233126	-	BC006295 TSC_hg19_v1_chr17_-_63556453	-234330	-	BC029524 NM_001037325	31855	-	BC131805 TSC_hg19_v1_chr17_-_64188195 BC037991 NM_145036 AK299075 AK096929 NM_001199165	397376	-	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	434720	-	CR933657|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##BC006295|AXIN2|8313|axin 2##BC029524|CEP112|201134|centrosomal protein 112kDa##NM_001037325|CEP112|201134|centrosomal protein 112kDa##BC131805|CEP112|201134|centrosomal protein 112kDa##BC037991|CEP112|201134|centrosomal protein 112kDa##NM_145036|CEP112|201134|centrosomal protein 112kDa##AK299075|CEP112|201134|centrosomal protein 112kDa##AK096929|CEP112|201134|centrosomal protein 112kDa##NM_001199165|CEP112|201134|centrosomal protein 112kDa##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	0.0	
chr17	74469783	74469888	reg1024826.p1	5.693	+	NM_001088 U40347 AB593119 BC069434	-6178	+	BC092430 NM_001166579	-20403	+	TSC_hg19_v1_chr17_-_74449273 AB051521 NM_022066	-20547	-	AK303434 AY500247 AK292166 NM_001005498	14063	-	TSC_hg19_v1_chr17_-_74497506 BC016034 AK292135 NM_024599	27624	-	AJ315162 AK098057 BC029798 AB057769 BC018822 NM_134268	63867	-	NM_001088|AANAT|15|aralkylamine N-acetyltransferase##U40347|AANAT|15|aralkylamine N-acetyltransferase##AB593119|AANAT|15|aralkylamine N-acetyltransferase##BC069434|AANAT|15|aralkylamine N-acetyltransferase##BC092430|AANAT|15|aralkylamine N-acetyltransferase##NM_001166579|AANAT|15|aralkylamine N-acetyltransferase##AB051521|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_022066|UBE2O|63893|ubiquitin-conjugating enzyme E2O##AK303434|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AY500247|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292166|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001005498|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##BC016034|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292135|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_024599|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AJ315162|CYGB|114757|cytoglobin##AK098057|CYGB|114757|cytoglobin##BC029798|CYGB|114757|cytoglobin##AB057769|CYGB|114757|cytoglobin##NM_134268|CYGB|114757|cytoglobin	0.994582	CTCF.p2:-1:0.995
chr20	56073985	56074083	reg1025339.p1	5.693	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-107577	+	NM_001190472	-139157	-	AK292247 AY349350 NM_001015885	-147433	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	26167	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	62123	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	121504	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.968352	CTCF.p2:16:0.933
chr6	143360144	143360247	reg1020906.p1	5.693	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	-93867	-	TSC_hg19_v1_chr6_+_142623443 BX640873	-736789	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-737126	+	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	21800	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	21841	+	TSC_hg19_v1_chr6_+_143382055 BC025278 CU692954 DQ893291 DQ896622 BX538067	21887	+	CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1##BC025278|AIG1|51390|androgen-induced 1##DQ893291|AIG1|51390|androgen-induced 1##DQ896622|AIG1|51390|androgen-induced 1##BX538067|AIG1|51390|androgen-induced 1	0.838183	CTCF.p2:-22:0.838
chr10	102242477	102242599	reg1025073.p1	5.692	+	Y11094 NM_003393 AB073637	-19733	+	AK023036 TSC_hg19_v1_chr10_+_102133657	-108910	+	TSC_hg19_v1_chr10_+_102123601 AF113690	-119026	+	AF274863 BX640914 BC044569 BC053949 BC034946 NM_015490 AK289975 BC071580 AK294551	37112	-	CR533490 DQ893286 DQ896618 EU831639 EU831723 TSC_hg19_v1_chr10_-_102289622 AF044958 AK289579 BC000466 BC019276	47077	-	AF077028 AK293081 AK304277 TSC_hg19_v1_chr10_-_102289637 AF115968 AL080056 NM_005004 AK295867	47098	-	Y11094|WNT8B|7479|wingless-type MMTV integration site family, member 8B##NM_003393|WNT8B|7479|wingless-type MMTV integration site family, member 8B##AB073637|WNT8B|7479|wingless-type MMTV integration site family, member 8B##AK023036|LINC00263|90271|long intergenic non-protein coding RNA 263##AF274863|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BX640914|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC044569|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC053949|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC034946|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##NM_015490|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##AK289975|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##BC071580|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##AK294551|SEC31B|25956|SEC31 homolog B (S. cerevisiae)##CR533490|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##DQ893286|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##DQ896618|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##EU831639|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##EU831723|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF044958|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AK289579|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##BC000466|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##BC019276|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF077028|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF115968|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AL080056|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##NM_005004|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa	0.349343	CTCF.p2:0:0.349
chr16	3317043	3317170	reg1023089.p2	5.692	+	BC104941 BC104943 TSC_hg19_v1_chr16_+_3313780 AK295350 AK096958	-3334	+	FJ785717 FJ785718 FJ785719 FJ785720 FJ785721 FJ785722 AB527834 BC101511 BC101537 Y14441 AK298660 AF018080 NM_000243 NM_001198536	-10500	-	Y14443 BC054005 NM_001145448 NM_198088 NM_001145446 NM_198087	-31699	-	TSC_hg19_v1_chr16_+_3333502 BC008805 NM_005741 AK312421	16337	+	TSC_hg19_v1_chr16_+_3333522 D88827	16418	+	TSC_hg19_v1_chr16_-_3355422 AK309406 NM_033208	38321	-	BC104941|FLJ39639|283876|uncharacterized protein FLJ39639##BC104943|FLJ39639|283876|uncharacterized protein FLJ39639##AK096958|FLJ39639|283876|uncharacterized protein FLJ39639##FJ785717|MEFV|4210|Mediterranean fever##FJ785718|MEFV|4210|Mediterranean fever##FJ785719|MEFV|4210|Mediterranean fever##FJ785720|MEFV|4210|Mediterranean fever##FJ785721|MEFV|4210|Mediterranean fever##FJ785722|MEFV|4210|Mediterranean fever##BC101511|MEFV|4210|Mediterranean fever##BC101537|MEFV|4210|Mediterranean fever##Y14441|MEFV|4210|Mediterranean fever##AK298660|MEFV|4210|Mediterranean fever##AF018080|MEFV|4210|Mediterranean fever##NM_000243|MEFV|4210|Mediterranean fever##NM_001198536|MEFV|4210|Mediterranean fever##Y14443|ZNF200|7752|zinc finger protein 200##BC054005|ZNF200|7752|zinc finger protein 200##NM_001145448|ZNF200|7752|zinc finger protein 200##NM_198088|ZNF200|7752|zinc finger protein 200##NM_001145446|ZNF200|7752|zinc finger protein 200##NM_198087|ZNF200|7752|zinc finger protein 200##BC008805|ZNF263|10127|zinc finger protein 263##NM_005741|ZNF263|10127|zinc finger protein 263##AK312421|ZNF263|10127|zinc finger protein 263##D88827|ZNF263|10127|zinc finger protein 263##NM_033208|TIGD7|91151|tigger transposable element derived 7	0.338577	CTCF.p2:18:0.339
chr18	48033654	48033755	reg1020618.p1	5.692	+	TSC_hg19_v1_chr18_+_47901415 NM_001039535 NM_145060 BC015706 AK313968 AK303464	-132307	+	BX647189 NM_001101654 NM_014593	-219013	-	AB031069 AF149758 AK314886 TSC_hg19_v1_chr18_-_47814205 AK294645	-219497	-	TSC_hg19_v1_chr18_+_48086463 BC050299 NM_002747 AK293818 BC040493 AK295058	52793	+	AB042647 AK054702 AK295666 NM_001127175 NM_001127176 NM_031939	312661	-	BC029860 NM_001127174	318038	-	NM_001039535|SKA1|220134|spindle and kinetochore associated complex subunit 1##NM_145060|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC015706|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK313968|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK303464|SKA1|220134|spindle and kinetochore associated complex subunit 1##BX647189|CXXC1|30827|CXXC finger protein 1##NM_001101654|CXXC1|30827|CXXC finger protein 1##NM_014593|CXXC1|30827|CXXC finger protein 1##AB031069|CXXC1|30827|CXXC finger protein 1##AF149758|CXXC1|30827|CXXC finger protein 1##AK314886|CXXC1|30827|CXXC finger protein 1##AK294645|CXXC1|30827|CXXC finger protein 1##BC050299|MAPK4|5596|mitogen-activated protein kinase 4##NM_002747|MAPK4|5596|mitogen-activated protein kinase 4##AK293818|MAPK4|5596|mitogen-activated protein kinase 4##BC040493|MAPK4|5596|mitogen-activated protein kinase 4##AK295058|MAPK4|5596|mitogen-activated protein kinase 4##AB042647|MRO|83876|maestro##AK054702|MRO|83876|maestro##AK295666|MRO|83876|maestro##NM_001127175|MRO|83876|maestro##NM_001127176|MRO|83876|maestro##NM_031939|MRO|83876|maestro##BC029860|MRO|83876|maestro##NM_001127174|MRO|83876|maestro	0.952413	CTCF.p2:-23:0.952
chr4	174341600	174341703	reg1023158.p2	5.692	+	AJ224677 NM_007281	-21035	-	TSC_hg19_v1_chr4_+_174292104 BC016757	-49543	+	TSC_hg19_v1_chr4_+_174292088 NM_003864 AF055993	-49588	+	AF087940 TSC_hg19_v1_chr4_-_174450385 AB464563	108740	-	BC101406 BC101974 BC109383 TSC_hg19_v1_chr4_-_174450570	108899	-	TSC_hg19_v1_chr4_-_174451381 NM_021973 AK122739 FJ226608	109718	-	AJ224677|SCRG1|11341|stimulator of chondrogenesis 1##NM_007281|SCRG1|11341|stimulator of chondrogenesis 1##BC016757|SAP30|8819|Sin3A-associated protein, 30kDa##NM_003864|SAP30|8819|Sin3A-associated protein, 30kDa##AF055993|SAP30|8819|Sin3A-associated protein, 30kDa##AF087940|HAND2|9464|heart and neural crest derivatives expressed 2##BC101406|HAND2|9464|heart and neural crest derivatives expressed 2##BC101974|HAND2|9464|heart and neural crest derivatives expressed 2##BC109383|HAND2|9464|heart and neural crest derivatives expressed 2##NM_021973|HAND2|9464|heart and neural crest derivatives expressed 2##AK122739|HAND2|9464|heart and neural crest derivatives expressed 2##FJ226608|HAND2|9464|heart and neural crest derivatives expressed 2	0.435715	CTCF.p2:-9:0.436
chr11	22266664	22266774	reg1023816.p2	5.691	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	-52072	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	-1575527	+	NM_004211 AF085412	-1645772	+	AB032435 NM_020346	92947	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	380642	-	TSC_hg19_v1_chr11_+_22688156 NM_001143830 AK313734	421439	+	AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F##NM_001143830|GAS2|2620|growth arrest-specific 2##AK313734|GAS2|2620|growth arrest-specific 2	0.970695	CTCF.p2:0:0.971
chr14	65753304	65753454	reg1024225.p1	5.691	+	TSC_hg19_v1_chr14_-_65569238 BC013669 NM_002382 NM_145112 NM_145113 NM_145114 NM_145116 NM_197957 AK290929 AL833643	-184141	-	AB463901 AY353088 CR542191 CU693010 X60287 M64240 AK292630 AK292189 BC003525 BC004516 AK290130 TSC_hg19_v1_chr14_-_65569205 BC036092 BC027924 BC025685	-184247	-	BC035148 BC052775 TSC_hg19_v1_chr14_+_65453967	-299413	+	AJ536056 NM_004480 NM_178155 NM_178156	123930	+	TSC_hg19_v1_chr14_+_65878582 BC142958 AK292413 AK294242 Y17976 Y17977	125241	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	125947	-	BC013669|MAX|4149|MYC associated factor X##NM_002382|MAX|4149|MYC associated factor X##NM_145112|MAX|4149|MYC associated factor X##NM_145113|MAX|4149|MYC associated factor X##NM_145114|MAX|4149|MYC associated factor X##NM_145116|MAX|4149|MYC associated factor X##NM_197957|MAX|4149|MYC associated factor X##AK290929|MAX|4149|MYC associated factor X##AL833643|MAX|4149|MYC associated factor X##AY353088|MAX|4149|MYC associated factor X##CR542191|MAX|4149|MYC associated factor X##X60287|MAX|4149|MYC associated factor X##M64240|MAX|4149|MYC associated factor X##AK292630|MAX|4149|MYC associated factor X##AK292189|MAX|4149|MYC associated factor X##BC003525|MAX|4149|MYC associated factor X##BC004516|MAX|4149|MYC associated factor X##AK290130|MAX|4149|MYC associated factor X##BC036092|MAX|4149|MYC associated factor X##BC027924|MAX|4149|MYC associated factor X##BC025685|MAX|4149|MYC associated factor X##AJ536056|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_004480|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178155|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178156|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431	0.431254	CTCF.p2:-4:0.431
chr17	5571353	5571468	reg1023154.p2	5.691	+	AF298548 TSC_hg19_v1_chr17_-_5487785 AF310105 AB023143 BC028066 BC051787 AK310936 NM_001033053 NM_014922 NM_033004 NM_033006 NM_033007	-83611	-	AF217966 AF131825 NM_001162371 TSC_hg19_v1_chr17_-_5404327	-167094	-	AK289939 AL136906 NM_024039	-181181	+	AK309645 TSC_hg19_v1_chr17_+_5972435 AK289603	401020	+	TSC_hg19_v1_chr17_+_5973700 AL833730 NM_015253	402397	+	TSC_hg19_v1_chr17_+_5974408 BC009975	403007	+	AF298548|NLRP1|22861|NLR family, pyrin domain containing 1##AF310105|NLRP1|22861|NLR family, pyrin domain containing 1##AB023143|NLRP1|22861|NLR family, pyrin domain containing 1##AK310936|NLRP1|22861|NLR family, pyrin domain containing 1##NM_001033053|NLRP1|22861|NLR family, pyrin domain containing 1##NM_014922|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033004|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033006|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033007|NLRP1|22861|NLR family, pyrin domain containing 1##AF217966|LOC728392|728392|uncharacterized LOC728392##AF131825|LOC728392|728392|uncharacterized LOC728392##NM_001162371|LOC728392|728392|uncharacterized LOC728392##AK289939|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AL136906|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##NM_024039|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AK309645|WSCD1|23302|WSC domain containing 1##AK289603|WSCD1|23302|WSC domain containing 1##AL833730|WSCD1|23302|WSC domain containing 1##NM_015253|WSCD1|23302|WSC domain containing 1##BC009975|WSCD1|23302|WSC domain containing 1	0.096759	
chr9	36550713	36550857	reg1024168.p1	5.691	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-149610	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-149888	-	AL136817 BC033786 NM_022781 NM_194329	-150532	-	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	22139	+	TSC_hg19_v1_chr9_-_37034361 NM_016734	483631	-	TSC_hg19_v1_chr9_+_37079908 AK091718	529121	+	NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##AL136817|RNF38|152006|ring finger protein 38##BC033786|RNF38|152006|ring finger protein 38##NM_022781|RNF38|152006|ring finger protein 38##NM_194329|RNF38|152006|ring finger protein 38##AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.0	
chr10	17418109	17418237	reg1025230.p2	5.690	+	TSC_hg19_v1_chr10_-_17271978 BC078172	-146187	-	TSC_hg19_v1_chr10_+_17271962 AK093924	-146194	+	TSC_hg19_v1_chr10_+_17271887 M25246	-146285	+	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	78041	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	78192	-	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	241200	-	AK093924|VIM|7431|vimentin##M25246|VIM|7431|vimentin##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A	0.976469	CTCF.p2:-5:0.976
chr1	233440385	233440504	reg1022742.p1	5.690	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	-8961	-	TSC_hg19_v1_chr1_+_233086381 AF416713	-354055	+	AK311229 AK316591 TSC_hg19_v1_chr1_+_233086356 BC005102 NM_032324	-354100	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	23139	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	309379	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	309475	+	NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK311229|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK316591|NTPCR|84284|nucleoside-triphosphatase, cancer-related##BC005102|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_032324|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1	0.792563	CTCF.p2:-9:0.793
chr12	6754204	6754315	reg1024174.p2	5.690	+	BC033571 TSC_hg19_v1_chr12_-_6745131 AK313127 BC072394 NM_020400	-9068	-	NM_001142961 TSC_hg19_v1_chr12_-_6740816	-13444	-	AK128741 NM_001273 TSC_hg19_v1_chr12_-_6716562	-37703	-	DQ890872 DQ894028 TSC_hg19_v1_chr12_-_6756578 AK302290 AK311572 BC033010 AB051833 NM_032489	2305	-	AK312782 TSC_hg19_v1_chr12_-_6756599	2351	-	BC013038 TSC_hg19_v1_chr12_-_6772286 AB197695 AB197696 AB197697 AB463779 EF152349 EF152350 EF152351 EF152352 BC007781 BC095434 AK313621 AF110645 AF156552 AF063594 AK293169 AK303354 NM_001127582 NM_001127583 NM_001127584 NM_001127585 NM_001127586 NM_016162	18047	-	BC033571|LPAR5|57121|lysophosphatidic acid receptor 5##AK313127|LPAR5|57121|lysophosphatidic acid receptor 5##BC072394|LPAR5|57121|lysophosphatidic acid receptor 5##NM_020400|LPAR5|57121|lysophosphatidic acid receptor 5##NM_001142961|LPAR5|57121|lysophosphatidic acid receptor 5##AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4##NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4##DQ890872|ACRBP|84519|acrosin binding protein##DQ894028|ACRBP|84519|acrosin binding protein##AK302290|ACRBP|84519|acrosin binding protein##AK311572|ACRBP|84519|acrosin binding protein##BC033010|ACRBP|84519|acrosin binding protein##AB051833|ACRBP|84519|acrosin binding protein##NM_032489|ACRBP|84519|acrosin binding protein##AK312782|ACRBP|84519|acrosin binding protein##BC013038|ING4|51147|inhibitor of growth family, member 4##AB197695|ING4|51147|inhibitor of growth family, member 4##AB197696|ING4|51147|inhibitor of growth family, member 4##AB197697|ING4|51147|inhibitor of growth family, member 4##EF152349|ING4|51147|inhibitor of growth family, member 4##EF152350|ING4|51147|inhibitor of growth family, member 4##EF152351|ING4|51147|inhibitor of growth family, member 4##EF152352|ING4|51147|inhibitor of growth family, member 4##BC007781|ING4|51147|inhibitor of growth family, member 4##BC095434|ING4|51147|inhibitor of growth family, member 4##AK313621|ING4|51147|inhibitor of growth family, member 4##AF110645|ING4|51147|inhibitor of growth family, member 4##AF156552|ING4|51147|inhibitor of growth family, member 4##AF063594|ING4|51147|inhibitor of growth family, member 4##AK293169|ING4|51147|inhibitor of growth family, member 4##AK303354|ING4|51147|inhibitor of growth family, member 4##NM_001127582|ING4|51147|inhibitor of growth family, member 4##NM_001127583|ING4|51147|inhibitor of growth family, member 4##NM_001127584|ING4|51147|inhibitor of growth family, member 4##NM_001127585|ING4|51147|inhibitor of growth family, member 4##NM_001127586|ING4|51147|inhibitor of growth family, member 4##NM_016162|ING4|51147|inhibitor of growth family, member 4	0.06277	
chr2	237453988	237454141	reg1027733.p1	5.690	+	BC043504 NM_024726 AK294105 BC028699	-37932	-	NM_212556 BX647589	-281070	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-377432	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	24364	+	BC036499 NM_006710 NM_198189	539954	+	TSC_hg19_v1_chr2_-_237994424 AK056246	540373	-	BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037	0.017195	
chr5	131999927	132000108	reg1019245.p4	5.690	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	-6127	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-107377	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	-120825	-	NM_000589 NM_172348	9355	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	73200	-	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	83127	+	BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A##AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2	0.0	
chr5	171878339	171878450	reg1023645.p1	5.690	+	NM_152277 TSC_hg19_v1_chr5_-_171710808	-167579	-	BC019910 TSC_hg19_v1_chr5_-_171710765 AK313274	-167690	-	NM_001171183	-257219	+	AB430862 DQ109556 BC038561 TSC_hg19_v1_chr5_-_171881387	2977	-	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	3109	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	189859	+	NM_152277|UBTD2|92181|ubiquitin domain containing 2##BC019910|UBTD2|92181|ubiquitin domain containing 2##AK313274|UBTD2|92181|ubiquitin domain containing 2##NM_001171183|EFCAB9|285588|EF-hand calcium binding domain 9##AB430862|SH3PXD2B|285590|SH3 and PX domains 2B##DQ109556|SH3PXD2B|285590|SH3 and PX domains 2B##BC038561|SH3PXD2B|285590|SH3 and PX domains 2B##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)	0.997937	CTCF.p2:-2:0.998
chr10	118047543	118047658	reg1022889.p1	5.689	+	AF038421 NM_005264 TSC_hg19_v1_chr10_-_118033147	-14532	-	AK292886 NM_001145453	-14844	-	AB590245 DQ892210 DQ895406 AF042080 U95847 U97144 BC014962 NM_145793	-15920	-	BC044830 NM_198515	36339	+	AL833418 BC117224 NM_001011709 HQ258260	139852	+	NM_000936 AK313941 J05125 BC007025 BC014309 CU676961 M93285	257915	+	AF038421|GFRA1|2674|GDNF family receptor alpha 1##NM_005264|GFRA1|2674|GDNF family receptor alpha 1##AK292886|GFRA1|2674|GDNF family receptor alpha 1##NM_001145453|GFRA1|2674|GDNF family receptor alpha 1##DQ892210|GFRA1|2674|GDNF family receptor alpha 1##DQ895406|GFRA1|2674|GDNF family receptor alpha 1##AF042080|GFRA1|2674|GDNF family receptor alpha 1##U95847|GFRA1|2674|GDNF family receptor alpha 1##U97144|GFRA1|2674|GDNF family receptor alpha 1##BC014962|GFRA1|2674|GDNF family receptor alpha 1##NM_145793|GFRA1|2674|GDNF family receptor alpha 1##BC044830|C10orf96|374355|chromosome 10 open reading frame 96##NM_198515|C10orf96|374355|chromosome 10 open reading frame 96##AL833418|PNLIPRP3|119548|pancreatic lipase-related protein 3##BC117224|PNLIPRP3|119548|pancreatic lipase-related protein 3##NM_001011709|PNLIPRP3|119548|pancreatic lipase-related protein 3##HQ258260|PNLIPRP3|119548|pancreatic lipase-related protein 3##NM_000936|PNLIP|5406|pancreatic lipase##AK313941|PNLIP|5406|pancreatic lipase##J05125|PNLIP|5406|pancreatic lipase##BC007025|PNLIP|5406|pancreatic lipase##BC014309|PNLIP|5406|pancreatic lipase##M93285|PNLIP|5406|pancreatic lipase	0.0	
chr12	110989965	110990146	reg1013741.p1	5.689	+	AK124109 NM_152442 AK301826 BC037353 AK302512 AY297459 BC068031 BC047645 AK097665	-49980	+	TSC_hg19_v1_chr12_-_110939917 BC015095 AF201946 AF175264 BC000880 AF168716 AF193795 AK129767 BC017964 AB578891 AB618733 AL136614 BC095446 NM_016226 NM_057180 BC032462 AB578892	-50145	-	TSC_hg19_v1_chr12_+_110906672 CR457001 CU676792 DQ891800 DQ894984	-83386	+	TSC_hg19_v1_chr12_-_111020755 AY357944	30738	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	31015	-	AK124744 TSC_hg19_v1_chr12_-_111021124	31071	-	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)##NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)##AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)##BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)##AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)##AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)##BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)##BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)##AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)##BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578891|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB618733|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578892|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##CR457001|C12orf24|29902|chromosome 12 open reading frame 24##DQ891800|C12orf24|29902|chromosome 12 open reading frame 24##DQ894984|C12orf24|29902|chromosome 12 open reading frame 24##AY357944|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)	0.39268	CTCF.p2:-44:0.393
chr12	84349124	84349242	reg1025929.p1	5.689	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	-1267922	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	-1268266	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	-1268483	+	AK291207 AK022853 TSC_hg19_v1_chr12_-_85306547	957360	-	TSC_hg19_v1_chr12_-_85306575 BC022253 BC070040	957389	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	957409	-	AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK291207|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK022853|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC022253|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC070040|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15	0.987213	CTCF.p2:21:0.987
chr14	59721783	59721923	reg1022528.p1	5.689	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	-66449	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-617107	+	AK302579 NM_001244193 AK310356 AK302718	-815427	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	210069	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	210203	-	TSC_hg19_v1_chr14_-_59951106 AK058165 NM_144581 BC012131	229227	-	BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135##AK058165|C14orf149|112849|chromosome 14 open reading frame 149##NM_144581|C14orf149|112849|chromosome 14 open reading frame 149##BC012131|C14orf149|112849|chromosome 14 open reading frame 149	0.099043	
chr15	58363152	58363257	reg1023340.p1	5.689	+	NM_001206897 NM_003888 NM_170696	-5084	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	-5326	-	AB015228 AB015227 NM_170697	-56965	-	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	67282	+	NM_000236 X07228 AK293324 AK309448 TSC_hg19_v1_chr15_+_58724189 D83548 BC132825 BC136495 J03895 J03540 AB528021 HQ258274	360998	+	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	678585	-	NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9##NM_000236|LIPC|3990|lipase, hepatic##X07228|LIPC|3990|lipase, hepatic##AK293324|LIPC|3990|lipase, hepatic##AK309448|LIPC|3990|lipase, hepatic##D83548|LIPC|3990|lipase, hepatic##BC132825|LIPC|3990|lipase, hepatic##BC136495|LIPC|3990|lipase, hepatic##J03895|LIPC|3990|lipase, hepatic##J03540|LIPC|3990|lipase, hepatic##HQ258274|LIPC|3990|lipase, hepatic##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10	0.949461	CTCF.p2:12:0.949
chr8	42010169	42010302	reg1015916.p1	5.689	+	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	-100736	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-255925	-	AK026601 TSC_hg19_v1_chr8_+_41685847	-324410	+	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	298	+	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	54853	-	AK289387 AK290575 NM_000930 NM_033011 TSC_hg19_v1_chr8_-_42065195	54959	-	U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue##AK289387|PLAT|5327|plasminogen activator, tissue##AK290575|PLAT|5327|plasminogen activator, tissue##NM_000930|PLAT|5327|plasminogen activator, tissue##NM_033011|PLAT|5327|plasminogen activator, tissue	0.776504	CTCF.p2:-3:0.777
chr1	111758527	111758707	reg1020449.p1	5.688	+	TSC_hg19_v1_chr1_-_111747005 AK026110	-11642	-	TSC_hg19_v1_chr1_-_111743297 AK301583	-15307	-	TSC_hg19_v1_chr1_-_111743272 BC004557 NM_024901	-15347	-	NM_001025197 NM_004000 U58514 U49835 BC011460 BT006767 DQ893705 CU679936	11699	+	NM_001025199 U58515 AK298466 AK223316	13775	+	AK290702 AB025008 AB025009 AY825504 NM_021797 AF290004 AY789444 NM_201653	74888	+	AK026110|DENND2D|79961|DENN/MADD domain containing 2D##AK301583|DENND2D|79961|DENN/MADD domain containing 2D##BC004557|DENND2D|79961|DENN/MADD domain containing 2D##NM_024901|DENND2D|79961|DENN/MADD domain containing 2D##NM_001025197|CHI3L2|1117|chitinase 3-like 2##NM_004000|CHI3L2|1117|chitinase 3-like 2##U58514|CHI3L2|1117|chitinase 3-like 2##U49835|CHI3L2|1117|chitinase 3-like 2##BC011460|CHI3L2|1117|chitinase 3-like 2##BT006767|CHI3L2|1117|chitinase 3-like 2##DQ893705|CHI3L2|1117|chitinase 3-like 2##NM_001025199|CHI3L2|1117|chitinase 3-like 2##U58515|CHI3L2|1117|chitinase 3-like 2##AK298466|CHI3L2|1117|chitinase 3-like 2##AK223316|CHI3L2|1117|chitinase 3-like 2##AK290702|CHIA|27159|chitinase, acidic##AB025008|CHIA|27159|chitinase, acidic##AB025009|CHIA|27159|chitinase, acidic##AY825504|CHIA|27159|chitinase, acidic##NM_021797|CHIA|27159|chitinase, acidic##AF290004|CHIA|27159|chitinase, acidic##AY789444|CHIA|27159|chitinase, acidic##NM_201653|CHIA|27159|chitinase, acidic	0.0	
chr1	159799129	159799275	reg1025842.p2	5.688	+	TSC_hg19_v1_chr1_+_159796662 BC109194	-2533	+	TSC_hg19_v1_chr1_+_159796539 AK074669 AF146761	-2624	+	NM_020125 TSC_hg19_v1_chr1_+_159796486	-2719	+	AK096506 NM_001134233	25934	-	HQ258612 BC132893 BC132895 NM_001013661	33176	-	BC089391 BC027874 NM_012337 BC064386 AF094758 AK308262 AK225566 AK225582 AK292249	70723	-	BC109194|SLAMF8|56833|SLAM family member 8##AK074669|SLAMF8|56833|SLAM family member 8##AF146761|SLAMF8|56833|SLAM family member 8##NM_020125|SLAMF8|56833|SLAM family member 8##AK096506|C1orf204|284677|chromosome 1 open reading frame 204##NM_001134233|C1orf204|284677|chromosome 1 open reading frame 204##HQ258612|VSIG8|391123|V-set and immunoglobulin domain containing 8##BC132893|VSIG8|391123|V-set and immunoglobulin domain containing 8##BC132895|VSIG8|391123|V-set and immunoglobulin domain containing 8##NM_001013661|VSIG8|391123|V-set and immunoglobulin domain containing 8##BC089391|CCDC19|25790|coiled-coil domain containing 19##BC027874|CCDC19|25790|coiled-coil domain containing 19##NM_012337|CCDC19|25790|coiled-coil domain containing 19##BC064386|CCDC19|25790|coiled-coil domain containing 19##AF094758|CCDC19|25790|coiled-coil domain containing 19##AK308262|CCDC19|25790|coiled-coil domain containing 19##AK225566|CCDC19|25790|coiled-coil domain containing 19##AK225582|CCDC19|25790|coiled-coil domain containing 19##AK292249|CCDC19|25790|coiled-coil domain containing 19	0.980212	CTCF.p2:33:0.980
chr15	74420155	74420335	reg1000131.p3	5.688	+	BC131515 AK292574 AF263742 NM_001038640	-45365	-	TSC_hg19_v1_chr15_+_74287153 AB384942 CU674024 BT009911	-133089	+	TSC_hg19_v1_chr15_+_74287135 M79462 M79463 M79464 M80185 AB208950	-133106	+	AK092302 AX747465 AB040898 BC152429 NM_001130136	1461	+	AK309388 NM_001130137 BC028042	1747	+	NM_001130138	2344	+	BC131515|GOLGA6A|342096|golgin A6 family, member A##AK292574|GOLGA6A|342096|golgin A6 family, member A##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001038640|GOLGA6A|342096|golgin A6 family, member A##BT009911|PML|5371|promyelocytic leukemia##M79462|PML|5371|promyelocytic leukemia##M79463|PML|5371|promyelocytic leukemia##M79464|PML|5371|promyelocytic leukemia##M80185|PML|5371|promyelocytic leukemia##AB208950|PML|5371|promyelocytic leukemia##AK092302|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AB040898|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC152429|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130136|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130137|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC028042|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130138|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	0.0	
chr2	224171252	224171368	reg1024068.p1	5.688	+	NM_080671 TSC_hg19_v1_chr2_+_223916907 DQ192293 AK313203 BC014429 AY065987	-254413	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	-445563	+	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	-634901	+	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	295756	-	TSC_hg19_v1_chr2_-_224467100 BC022509	295797	-	TSC_hg19_v1_chr2_-_224467145 NM_003469	295869	-	NM_080671|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##DQ192293|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AK313203|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##BC014429|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AY065987|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II##BC022509|SCG2|7857|secretogranin II##NM_003469|SCG2|7857|secretogranin II	0.931664	CTCF.p2:-15:0.932
chr2	97175474	97175573	reg1000699.p2	5.688	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-173987	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-174047	+	NM_178495 NM_001163524 BC034503	-183575	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	26962	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	128496	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	128544	-	BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_178495|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163524|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC034503|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.0	
chr14	34770479	34770588	reg1023960.p2	5.687	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	-350384	-	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1362043	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1971997	+	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	160954	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	238352	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	328822	-	BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6	0.531629	CTCF.p2:4:0.532
chr2	19577648	19577757	reg1026000.p2	5.687	+	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	-19323	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	-806892	-	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	-835786	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	490933	+	TSC_hg19_v1_chr2_-_20101456 BC050088	523726	-	CU691276 BC070381 TSC_hg19_v1_chr2_-_20101717 BC057850 NM_001008237	523979	-	BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946##BC070381|TTC32|130502|tetratricopeptide repeat domain 32##BC057850|TTC32|130502|tetratricopeptide repeat domain 32##NM_001008237|TTC32|130502|tetratricopeptide repeat domain 32	0.828627	CTCF.p2:-14:0.829
chr10	12889673	12889793	reg1020423.p1	5.686	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-497956	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-498016	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	-498158	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	153966	-	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	252412	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	313835	+	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10	0.981267	CTCF.p2:35:0.981
chr15	89157873	89157991	reg1025112.p1	5.686	+	BC109060 BC109061 BC073867 AK054603 BC064591 AB073887 NM_001144074 NM_017996	-68081	-	TSC_hg19_v1_chr15_+_89010935 BC032378 BC012489 AK027059 AK026165 AK222933 AK315407 AK223152 BC000200 CU680342 CU689362 DQ891586 DQ894780 BC009451	-147006	+	AB049944 NM_022839 NM_176805	-147249	+	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	6638	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	24254	+	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	188754	+	BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC032378|MRPS11|64963|mitochondrial ribosomal protein S11##BC012489|MRPS11|64963|mitochondrial ribosomal protein S11##AK027059|MRPS11|64963|mitochondrial ribosomal protein S11##AK026165|MRPS11|64963|mitochondrial ribosomal protein S11##AK222933|MRPS11|64963|mitochondrial ribosomal protein S11##AK315407|MRPS11|64963|mitochondrial ribosomal protein S11##AK223152|MRPS11|64963|mitochondrial ribosomal protein S11##BC000200|MRPS11|64963|mitochondrial ribosomal protein S11##DQ891586|MRPS11|64963|mitochondrial ribosomal protein S11##DQ894780|MRPS11|64963|mitochondrial ribosomal protein S11##BC009451|MRPS11|64963|mitochondrial ribosomal protein S11##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan	0.676452	CTCF.p2:4:0.676
chr19	39888548	39888728	reg1000506.p2	5.686	+	TSC_hg19_v1_chr19_+_39882046 AL137304 AK000411 AK298014 BC019015 AK092909 AX747802 AK124629 AK316010 AK090877 AK297772 AX746660 AK294667	-6600	+	AK300563 TSC_hg19_v1_chr19_+_39882017 AY729650 NM_017592 AB528726	-6655	+	AK098423 AJ401156 BC000017 NM_019088 TSC_hg19_v1_chr19_-_39881747 AK001985 BC013402 AK294625	-6944	-	TSC_hg19_v1_chr19_+_39897486 AK314042 M92843 NM_003407 BC009693 M63625 EU446714 EU832179 EU832272 CU679443	9136	+	TSC_hg19_v1_chr19_+_39899749 AJ227917	11155	+	AK024429 NM_022835	15111	+	AL137304|MED29|55588|mediator complex subunit 29##AK000411|MED29|55588|mediator complex subunit 29##AK298014|MED29|55588|mediator complex subunit 29##BC019015|MED29|55588|mediator complex subunit 29##AK092909|MED29|55588|mediator complex subunit 29##AK124629|MED29|55588|mediator complex subunit 29##AK316010|MED29|55588|mediator complex subunit 29##AK090877|MED29|55588|mediator complex subunit 29##AK297772|MED29|55588|mediator complex subunit 29##AK294667|MED29|55588|mediator complex subunit 29##AK300563|MED29|55588|mediator complex subunit 29##AY729650|MED29|55588|mediator complex subunit 29##NM_017592|MED29|55588|mediator complex subunit 29##AK098423|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AJ401156|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##BC000017|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##NM_019088|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK001985|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##BC013402|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK294625|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK314042|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##M92843|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##NM_003407|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##BC009693|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##M63625|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU446714|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU832179|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU832272|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2##NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2	0.0	
chr2	29276840	29276965	reg1022859.p1	5.686	+	AK296977 NM_199280	-72739	+	TSC_hg19_v1_chr2_+_29117555 NM_015131 D26488	-159364	+	AK225551 CU674472 CU679681 TSC_hg19_v1_chr2_-_29093160 AK308821 BC010365 AL136689 BC000952 AK000635 AK225524 NM_017910	-183743	-	NM_001029883	20224	-	TSC_hg19_v1_chr2_+_29338370 BC013862 NM_024692 AL834443	61453	+	EU788003 EU788004 EU788005 EU788006 EU788007 EU788008 EU788009 EU788010 FJ838786 FJ838787 U62540 TSC_hg19_v1_chr2_-_30144453 AK296218 NM_004304	867552	-	AK296977|FAM179A|165186|family with sequence similarity 179, member A##NM_199280|FAM179A|165186|family with sequence similarity 179, member A##NM_015131|WDR43|23160|WD repeat domain 43##D26488|WDR43|23160|WD repeat domain 43##AK225551|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##BC010365|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##AL136689|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##BC000952|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##AK225524|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##NM_017910|TRMT61B|55006|tRNA methyltransferase 61 homolog B (S. cerevisiae)##NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71##BC013862|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_024692|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##AL834443|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##EU788003|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788004|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788005|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788006|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788007|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788008|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788009|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788010|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838786|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838787|ALK|238|anaplastic lymphoma receptor tyrosine kinase##U62540|ALK|238|anaplastic lymphoma receptor tyrosine kinase##AK296218|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_004304|ALK|238|anaplastic lymphoma receptor tyrosine kinase	0.0	
chr5	54522350	54522490	reg1024830.p1	5.686	+	CU691502 AB077044 BC136572 AB077043 AB081750 AB086378 BC037547 AK095246 NM_001145734 NM_001170402 NM_152623 TSC_hg19_v1_chr5_-_54469147	-53430	-	AK074216 NM_001008397 BC029424 BX537894 BX647770 AK298545 AK307365 AY358715 CU688646	-66438	+	NM_006144 BC015739 DQ893071 DQ896326 AB528402 CR456968 M18737	-123929	+	NM_001190787	722	-	BC004877 TSC_hg19_v1_chr5_-_54529425 AK290030 AK026075 NM_021147	7045	-	AB590960 TSC_hg19_v1_chr5_-_54603502 BC056219 AY036974 AK308332 NM_019030 BX649135	81041	-	AB077044|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##BC136572|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AB077043|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AB081750|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AB086378|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##BC037547|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AK095246|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##NM_001145734|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##NM_001170402|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##NM_152623|CDC20B|166979|cell division cycle 20 homolog B (S. cerevisiae)##AK074216|GPX8|493869|glutathione peroxidase 8 (putative)##NM_001008397|GPX8|493869|glutathione peroxidase 8 (putative)##BC029424|GPX8|493869|glutathione peroxidase 8 (putative)##BX537894|GPX8|493869|glutathione peroxidase 8 (putative)##BX647770|GPX8|493869|glutathione peroxidase 8 (putative)##AK298545|GPX8|493869|glutathione peroxidase 8 (putative)##AK307365|GPX8|493869|glutathione peroxidase 8 (putative)##AY358715|GPX8|493869|glutathione peroxidase 8 (putative)##NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##NM_001190787|IDAS|345643|Idas protein##BC004877|CCNO|10309|cyclin O##AK026075|CCNO|10309|cyclin O##NM_021147|CCNO|10309|cyclin O##BC056219|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29##AY036974|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29##AK308332|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29##NM_019030|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29##BX649135|DHX29|54505|DEAH (Asp-Glu-Ala-His) box polypeptide 29	0.157563	
chr8	30848984	30849108	reg1022698.p1	5.686	+	AF285605 NM_031271 BC140934	-142477	-	TSC_hg19_v1_chr8_-_30670335 NM_001009552	-178695	-	TSC_hg19_v1_chr8_-_30670318 AK091875	-178734	-	BC106708 NM_013357	41270	-	NM_000553	41731	+	AF195513 AY077841 NM_001015508	42184	-	AF285605|TEX15|56154|testis expressed 15##NM_031271|TEX15|56154|testis expressed 15##BC140934|TEX15|56154|testis expressed 15##NM_001009552|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##AK091875|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##BC106708|PURG|29942|purine-rich element binding protein G##NM_013357|PURG|29942|purine-rich element binding protein G##NM_000553|WRN|7486|Werner syndrome, RecQ helicase-like##AF195513|PURG|29942|purine-rich element binding protein G##AY077841|PURG|29942|purine-rich element binding protein G##NM_001015508|PURG|29942|purine-rich element binding protein G	0.073626	
chr19	2224047	2224187	reg1024556.p1	5.684	+	BC021037 TSC_hg19_v1_chr19_+_2222534	-1643	+	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	-59979	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-72564	-	BC032803 TSC_hg19_v1_chr19_+_2232168	8004	+	CR457253 CU679203 TSC_hg19_v1_chr19_-_2236329 AK092742 AX747701 BC003084 BC008966 AK001159 NM_018049	12172	-	TSC_hg19_v1_chr19_-_2236650 AK098725	12538	-	BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##CR457253|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK092742|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC003084|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC008966|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK001159|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##NM_018049|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK098725|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1	0.0	
chr3	18889184	18889299	reg1025531.p1	5.684	+	BC001744 NM_001131010	-409008	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	-422444	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-1105074	-	AK295633 AY053503 NM_144633 AB209053 AK309034	300763	+	BC028198 AK097644 NM_144715	1086447	-	TSC_hg19_v1_chr3_+_19988586 NM_004162	1099448	+	BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##BC028198|EFHB|151651|EF-hand domain family, member B##AK097644|EFHB|151651|EF-hand domain family, member B##NM_144715|EFHB|151651|EF-hand domain family, member B##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family	0.977003	CTCF.p2:10:0.977
chr10	116063983	116064164	reg1001398.p2	5.683	+	TSC_hg19_v1_chr10_+_115999012 AK122716 NM_198496 AJ536328 AJ616914 BC128588 AY572972 BC143380	-64914	+	AK122916 AL833340 NM_198795 BX648664 BC063133	-125002	+	NM_018017	-129710	-	AK123108 BC033212 AK027470 TSC_hg19_v1_chr10_-_116164254 AK294969 AK291712 AF474151	100169	-	BC024314 NM_001001936 NM_032550	100441	-	CU677968 TSC_hg19_v1_chr10_-_116251632	187534	-	AK122716|VWA2|340706|von Willebrand factor A domain containing 2##NM_198496|VWA2|340706|von Willebrand factor A domain containing 2##AJ536328|VWA2|340706|von Willebrand factor A domain containing 2##AJ616914|VWA2|340706|von Willebrand factor A domain containing 2##BC128588|VWA2|340706|von Willebrand factor A domain containing 2##AY572972|VWA2|340706|von Willebrand factor A domain containing 2##BC143380|VWA2|340706|von Willebrand factor A domain containing 2##AK122916|TDRD1|56165|tudor domain containing 1##AL833340|TDRD1|56165|tudor domain containing 1##NM_198795|TDRD1|56165|tudor domain containing 1##BX648664|TDRD1|56165|tudor domain containing 1##BC063133|TDRD1|56165|tudor domain containing 1##NM_018017|C10orf118|55088|chromosome 10 open reading frame 118##AK123108|AFAP1L2|84632|actin filament associated protein 1-like 2##BC033212|AFAP1L2|84632|actin filament associated protein 1-like 2##AK294969|AFAP1L2|84632|actin filament associated protein 1-like 2##AK291712|AFAP1L2|84632|actin filament associated protein 1-like 2##AF474151|AFAP1L2|84632|actin filament associated protein 1-like 2##BC024314|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_001001936|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_032550|AFAP1L2|84632|actin filament associated protein 1-like 2	0.0	
chr12	52550836	52550989	reg1004405.p2	5.683	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	-87114	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	-87158	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	-105696	+	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	34832	-	BC117348 BC126393 BC038743 NM_001242696	53651	-	NM_005556 TSC_hg19_v1_chr12_+_52626966	76050	+	BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80##BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##NM_005556|KRT7|3855|keratin 7	0.0	
chr14	66862172	66862291	reg1024369.p2	5.683	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-982506	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-982743	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-982905	-	AB037806 AF272663 NM_001024218 NM_020806	111893	+	TSC_hg19_v1_chr14_+_66974859 AK025169	112622	+	TSC_hg19_v1_chr14_+_66974870 AK315569	112638	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.864697	CTCF.p2:12:0.865
chr1	55266908	55267089	reg1019951.p1	5.683	+	AK000626 NM_001114108 NM_017904	-93	-	BC007956 AK289679 TSC_hg19_v1_chr1_-_55230197 BC011758 NM_152268	-36806	-	AK025524 NM_004623 TSC_hg19_v1_chr1_+_55181537 AF063602 AK292426 AK090964 AX746706 AK222562 AF073887 BC001276 BT006817 CU674642	-85461	+	AK097520 NM_001110533 NM_152607 BC039109 BC064142	4756	+	TSC_hg19_v1_chr1_-_55331351 AK298414	64353	-	AK316419 TSC_hg19_v1_chr1_-_55352418 AK302774 AK304437 AK316427	85518	-	AK000626|TTC22|55001|tetratricopeptide repeat domain 22##NM_001114108|TTC22|55001|tetratricopeptide repeat domain 22##NM_017904|TTC22|55001|tetratricopeptide repeat domain 22##BC007956|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##AK289679|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##BC011758|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##NM_152268|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##AK025524|TTC4|7268|tetratricopeptide repeat domain 4##NM_004623|TTC4|7268|tetratricopeptide repeat domain 4##AF063602|TTC4|7268|tetratricopeptide repeat domain 4##AK292426|TTC4|7268|tetratricopeptide repeat domain 4##AK090964|TTC4|7268|tetratricopeptide repeat domain 4##AK222562|TTC4|7268|tetratricopeptide repeat domain 4##AF073887|TTC4|7268|tetratricopeptide repeat domain 4##BC001276|TTC4|7268|tetratricopeptide repeat domain 4##BT006817|TTC4|7268|tetratricopeptide repeat domain 4##AK097520|C1orf177|163747|chromosome 1 open reading frame 177##NM_001110533|C1orf177|163747|chromosome 1 open reading frame 177##NM_152607|C1orf177|163747|chromosome 1 open reading frame 177##BC039109|C1orf177|163747|chromosome 1 open reading frame 177##BC064142|C1orf177|163747|chromosome 1 open reading frame 177##AK298414|DHCR24|1718|24-dehydrocholesterol reductase##AK316419|DHCR24|1718|24-dehydrocholesterol reductase##AK302774|DHCR24|1718|24-dehydrocholesterol reductase##AK304437|DHCR24|1718|24-dehydrocholesterol reductase##AK316427|DHCR24|1718|24-dehydrocholesterol reductase	0.016182	
chr15	65301449	65301582	reg1027625.p1	5.683	+	TSC_hg19_v1_chr15_-_65282253 AK301362 NM_001127890 NM_016630	-19269	-	TSC_hg19_v1_chr15_-_65282170 AK172849 AK225527 AK312943 BC000244	-19381	-	TSC_hg19_v1_chr15_-_65281780 AF212231 NM_001127889	-19706	-	TSC_hg19_v1_chr15_-_65321968 AK055688 AB590989 BC016630 BC033687 AK301390 NM_139242	20448	-	NM_178859 AK129601	36240	+	CU691030 AK314914 AK296261 TSC_hg19_v1_chr15_-_65360286 AF233588	58716	-	AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK055688|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##BC016630|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##BC033687|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##AK301390|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##NM_139242|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##NM_178859|OSTBETA|123264|organic solute transporter beta##AK129601|OSTBETA|123264|organic solute transporter beta##AK314914|RASL12|51285|RAS-like, family 12##AK296261|RASL12|51285|RAS-like, family 12##AF233588|RASL12|51285|RAS-like, family 12	0.0	
chr3	127402710	127402855	reg1023425.p1	5.683	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-10965	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-54750	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-85498	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	138648	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	139360	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	231536	+	NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.302963	CTCF.p2:-9:0.303
chrY	28709293	28709402	reg1023721.p1	5.683	+	AK292375 BC033041 NM_001003894 NM_001003895 NM_004680 NM_170723 AK292318 AF000981 AF080597	-941073	+	AF000980 NM_001002760 NM_001002761 NM_004678	-1511097	-	NM_001005375 NM_020364 NM_020420 NM_001005785 NM_001005786 AF414184 BC047480 BC036648 BC047617 U21663 AF248480 AF248482 AF248481 BC113005 BC113006	-1729274	+	AK289543 AK311508 NM_005840 AK125483	30391093	+	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	30504650	+	M84747 NM_002186 AK303178 BC025298 BC051337 S71404 CU690808	30621000	+	AK292375|CDY1|9085|chromodomain protein, Y-linked, 1##BC033041|CDY1|9085|chromodomain protein, Y-linked, 1##NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1##NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1##AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B##AF000981|CDY1|9085|chromodomain protein, Y-linked, 1##AF080597|CDY1|9085|chromodomain protein, Y-linked, 1##AF000980|BPY2|9083|basic charge, Y-linked, 2##NM_001002760|BPY2B|442867|basic charge, Y-linked, 2B##NM_001002761|BPY2C|442868|basic charge, Y-linked, 2C##NM_004678|BPY2|9083|basic charge, Y-linked, 2##NM_001005375|DAZ4|57135|deleted in azoospermia 4##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##NM_001005785|DAZ2|57055|deleted in azoospermia 2##NM_001005786|DAZ2|57055|deleted in azoospermia 2##AF414184|DAZ2|57055|deleted in azoospermia 2##BC047480|DAZ4|57135|deleted in azoospermia 4##BC036648|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##U21663|DAZ2|57055|deleted in azoospermia 2##AF248480|DAZ2|57055|deleted in azoospermia 2##AF248482|DAZ4|57135|deleted in azoospermia 4##AF248481|DAZ3|57054|deleted in azoospermia 3##BC113005|DAZ3|57054|deleted in azoospermia 3##BC113006|DAZ2|57055|deleted in azoospermia 2##AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7##M84747|IL9R|3581|interleukin 9 receptor##NM_002186|IL9R|3581|interleukin 9 receptor##AK303178|IL9R|3581|interleukin 9 receptor##BC025298|IL9R|3581|interleukin 9 receptor##BC051337|IL9R|3581|interleukin 9 receptor##S71404|IL9R|3581|interleukin 9 receptor	0.996435	CTCF.p2:-13:0.996
chr17	42997664	42997845	reg1001607.p2	5.682	+	BC062609 AB463686 J04569 BC013596 AF419299 BC041765 AK128790 TSC_hg19_v1_chr17_-_42992869 AK098380 AK098758 AK222683 AK295734 AK296259 AK303728 S40719 AK315398 NM_001131019 NM_001242376 NM_002055	-4869	-	BC127871 TSC_hg19_v1_chr17_-_42988807	-8952	-	M26638 TSC_hg19_v1_chr17_-_42988747	-9038	-	TSC_hg19_v1_chr17_-_43025057 NM_001080443	27308	-	TSC_hg19_v1_chr17_-_43045715 BC008798 NM_006688	47944	-	TSC_hg19_v1_chr17_-_43128979 AK290755 NM_001128631 AK026608	131175	-	BC062609|GFAP|2670|glial fibrillary acidic protein##J04569|GFAP|2670|glial fibrillary acidic protein##BC013596|GFAP|2670|glial fibrillary acidic protein##AF419299|GFAP|2670|glial fibrillary acidic protein##BC041765|GFAP|2670|glial fibrillary acidic protein##AK128790|GFAP|2670|glial fibrillary acidic protein##AK098380|GFAP|2670|glial fibrillary acidic protein##AK098758|GFAP|2670|glial fibrillary acidic protein##AK222683|GFAP|2670|glial fibrillary acidic protein##AK295734|GFAP|2670|glial fibrillary acidic protein##AK296259|GFAP|2670|glial fibrillary acidic protein##AK303728|GFAP|2670|glial fibrillary acidic protein##S40719|GFAP|2670|glial fibrillary acidic protein##AK315398|GFAP|2670|glial fibrillary acidic protein##NM_001131019|GFAP|2670|glial fibrillary acidic protein##NM_001242376|GFAP|2670|glial fibrillary acidic protein##NM_002055|GFAP|2670|glial fibrillary acidic protein##BC127871|GFAP|2670|glial fibrillary acidic protein##M26638|GFAP|2670|glial fibrillary acidic protein##NM_001080443|KIF18B|146909|kinesin family member 18B##BC008798|C1QL1|10882|complement component 1, q subcomponent-like 1##NM_006688|C1QL1|10882|complement component 1, q subcomponent-like 1##AK290755|DCAKD|79877|dephospho-CoA kinase domain containing##NM_001128631|DCAKD|79877|dephospho-CoA kinase domain containing##AK026608|DCAKD|79877|dephospho-CoA kinase domain containing	0.0	
chr17	80732940	80733102	reg1023889.p1	5.682	+	TSC_hg19_v1_chr17_+_80710051 AJ006417 DQ891885 EU176650	-22973	+	TSC_hg19_v1_chr17_+_80710000 AK091959 AX747278	-23013	+	TSC_hg19_v1_chr17_+_80709949 BC003094 NM_005993 AB023205 AK293471 BC006364	-23067	+	BC109036 BC109037 AK301690 AK023903 NM_024702	64888	-	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	273449	-	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	276648	-	AJ006417|TBCD|6904|tubulin folding cofactor D##DQ891885|TBCD|6904|tubulin folding cofactor D##EU176650|TBCD|6904|tubulin folding cofactor D##AK091959|TBCD|6904|tubulin folding cofactor D##BC003094|TBCD|6904|tubulin folding cofactor D##NM_005993|TBCD|6904|tubulin folding cofactor D##AB023205|TBCD|6904|tubulin folding cofactor D##AK293471|TBCD|6904|tubulin folding cofactor D##BC006364|TBCD|6904|tubulin folding cofactor D##BC109036|ZNF750|79755|zinc finger protein 750##BC109037|ZNF750|79755|zinc finger protein 750##AK301690|ZNF750|79755|zinc finger protein 750##AK023903|ZNF750|79755|zinc finger protein 750##NM_024702|ZNF750|79755|zinc finger protein 750##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1	0.798329	CTCF.p2:10:0.798
chr22	37579709	37579808	reg1025868.p2	5.682	+	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	-33806	-	CR456446 TSC_hg19_v1_chr22_-_37505748	-74080	-	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	-80183	-	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	4533	-	BC042068 NM_001051 AK291165	28625	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	60463	-	BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##CR456446|TMPRSS6|164656|transmembrane protease, serine 6##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)	0.0	
chr5	74062298	74062412	reg1024268.p1	5.682	+	TSC_hg19_v1_chr5_-_74029248 AK126251	-33083	-	TSC_hg19_v1_chr5_+_73981057 AK130375 BC017378 CU675968 BT009919 M19735	-81267	+	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	-81347	+	AK307839 BC015712 TSC_hg19_v1_chr5_-_74062944 AY453587 BC030612 AK308422 AF111808 AK025314 AK315705 AF367997 NM_032380 NM_170681 NM_170691	608	-	BC005288 AK313784 AF372458 AF077615 NM_014886 AJ012409	732	+	BC039003 TSC_hg19_v1_chr5_+_74161735	99371	+	AK130375|HEXB|3074|hexosaminidase B (beta polypeptide)##BC017378|HEXB|3074|hexosaminidase B (beta polypeptide)##BT009919|HEXB|3074|hexosaminidase B (beta polypeptide)##M19735|HEXB|3074|hexosaminidase B (beta polypeptide)##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)##AK307839|GFM2|84340|G elongation factor, mitochondrial 2##BC015712|GFM2|84340|G elongation factor, mitochondrial 2##AY453587|GFM2|84340|G elongation factor, mitochondrial 2##BC030612|GFM2|84340|G elongation factor, mitochondrial 2##AK308422|GFM2|84340|G elongation factor, mitochondrial 2##AF111808|GFM2|84340|G elongation factor, mitochondrial 2##AK025314|GFM2|84340|G elongation factor, mitochondrial 2##AK315705|GFM2|84340|G elongation factor, mitochondrial 2##AF367997|GFM2|84340|G elongation factor, mitochondrial 2##NM_032380|GFM2|84340|G elongation factor, mitochondrial 2##NM_170681|GFM2|84340|G elongation factor, mitochondrial 2##NM_170691|GFM2|84340|G elongation factor, mitochondrial 2##BC005288|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AK313784|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF372458|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF077615|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##NM_014886|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AJ012409|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##BC039003|LOC441086|441086|uncharacterized LOC441086	0.01214	
chr6	133506100	133506218	reg1024729.p1	5.682	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	-370440	+	TSC_hg19_v1_chr6_+_133135707 AK096147 NM_001016 D28378 X53505	-370452	+	AK124442 BC069570 AK293853 TSC_hg19_v1_chr6_-_133119740 NM_052831 AK289918	-386458	-	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	56332	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	56373	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	704095	+	AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##AK096147|SNORA33|594839|small nucleolar RNA, H/ACA box 33##NM_001016|RPS12|6206|ribosomal protein S12##D28378|RPS12|6206|ribosomal protein S12##X53505|RPS12|6206|ribosomal protein S12##AK124442|C6orf192|116843|chromosome 6 open reading frame 192##BC069570|C6orf192|116843|chromosome 6 open reading frame 192##AK293853|C6orf192|116843|chromosome 6 open reading frame 192##NM_052831|C6orf192|116843|chromosome 6 open reading frame 192##AK289918|C6orf192|116843|chromosome 6 open reading frame 192##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21	0.03985	
chr8	95132601	95132733	reg1022332.p2	5.682	+	NM_001161778 AB590483 TSC_hg19_v1_chr8_+_94930074 AK302651	-202632	+	NM_018444 TSC_hg19_v1_chr8_+_94929171 BC047619 NM_001161780 AK057079 NM_001161779 BC064978 AF155661 NM_001161781	-203487	+	AK308071 NM_001142301 NM_153704 AK092244 AX747428 TSC_hg19_v1_chr8_+_94767121 AK308735 BX648768 BC031220 BC017974 BC054338 AK094935 BC032835	-365553	+	U07969 BC112013 BC113464 TSC_hg19_v1_chr8_-_95220784 X83228 AK301001 NM_004063	88127	-	AK312873 NM_001144663	96863	-	U10550 TSC_hg19_v1_chr8_-_95274525	141855	-	NM_001161778|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK302651|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_018444|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC047619|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161780|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK057079|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161779|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC064978|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AF155661|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161781|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK308071|TMEM67|91147|transmembrane protein 67##NM_001142301|TMEM67|91147|transmembrane protein 67##NM_153704|TMEM67|91147|transmembrane protein 67##AK092244|TMEM67|91147|transmembrane protein 67##AK308735|TMEM67|91147|transmembrane protein 67##BX648768|TMEM67|91147|transmembrane protein 67##BC031220|TMEM67|91147|transmembrane protein 67##BC017974|TMEM67|91147|transmembrane protein 67##BC054338|TMEM67|91147|transmembrane protein 67##AK094935|TMEM67|91147|transmembrane protein 67##BC032835|TMEM67|91147|transmembrane protein 67##U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle	0.051223	
chr11	7914453	7914580	reg1024796.p1	5.681	+	AB463971 AF158377 NM_153445	-66998	-	AF173006 NM_153444 HQ258379 BC101710 BC113557	-96013	-	NM_198185	-186576	-	AB529270 NM_001004461	35692	-	AB529269 NM_001003745 BC137031 BC137032	46587	-	AY154465 AY489192 NM_176821 BC104957	70572	-	AF158377|OR5P3|120066|olfactory receptor, family 5, subfamily P, member 3##NM_153445|OR5P3|120066|olfactory receptor, family 5, subfamily P, member 3##AF173006|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##NM_153444|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##HQ258379|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##BC101710|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##BC113557|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##NM_198185|OVCH2|341277|ovochymase 2 (gene/pseudogene)##NM_001004461|OR10A6|390093|olfactory receptor, family 10, subfamily A, member 6##NM_001003745|OR10A3|26496|olfactory receptor, family 10, subfamily A, member 3##BC137031|OR10A3|26496|olfactory receptor, family 10, subfamily A, member 3##BC137032|OR10A3|26496|olfactory receptor, family 10, subfamily A, member 3##AY154465|NLRP10|338322|NLR family, pyrin domain containing 10##AY489192|NLRP10|338322|NLR family, pyrin domain containing 10##NM_176821|NLRP10|338322|NLR family, pyrin domain containing 10##BC104957|NLRP10|338322|NLR family, pyrin domain containing 10	0.954523	CTCF.p2:-10:0.955
chr12	112111437	112111543	reg1025794.p1	5.681	+	TSC_hg19_v1_chr12_-_112037387 BC111757 BC114546 NM_002973 U70323	-74071	-	TSC_hg19_v1_chr12_-_112037088 Y08262	-74433	-	TSC_hg19_v1_chr12_-_112036908 AK307803	-74577	-	TSC_hg19_v1_chr12_-_112123512 AK308279 AB590810	12060	-	TSC_hg19_v1_chr12_-_112123733 BC136698 BC136699 AF035620 AK290379 AY332222	12228	-	TSC_hg19_v1_chr12_-_112123740 AB208878	12264	-	BC111757|ATXN2|6311|ataxin 2##BC114546|ATXN2|6311|ataxin 2##NM_002973|ATXN2|6311|ataxin 2##U70323|ATXN2|6311|ataxin 2##Y08262|ATXN2|6311|ataxin 2##AK307803|ATXN2|6311|ataxin 2##AK308279|BRAP|8315|BRCA1 associated protein##BC136698|BRAP|8315|BRCA1 associated protein##BC136699|BRAP|8315|BRCA1 associated protein##AF035620|BRAP|8315|BRCA1 associated protein##AK290379|BRAP|8315|BRCA1 associated protein##AY332222|BRAP|8315|BRCA1 associated protein##AB208878|BRAP|8315|BRCA1 associated protein	0.973769	CTCF.p2:5:0.963
chr17	39823352	39823462	reg1026413.p1	5.681	+	AB528302 DQ891101 DQ894283 BC072018 BC072019 BC011901 X62571 BC000159 BC056421 AK304373 AK095342 NM_000422	-42586	-	S79867 DQ891307 DQ896818 AF061812 BC039169 AK290853 AK309296 AK309278 NM_005557	-54399	-	BT007186 AB527765 DQ890733 DQ892997 DQ893905 BC042437 BC002690 BC019097 BC094830 AK309280 NM_000526	-80292	-	NM_005801 TSC_hg19_v1_chr17_+_39845138 AL050005 AK311862	21726	+	AK311209 TSC_hg19_v1_chr17_+_39845141	21734	+	TSC_hg19_v1_chr17_+_39845142 BC005118 L26247 AF083441 BC008710 AF100737 AJ012375 DQ896700 EU176404 BT006645 CR457051	21809	+	DQ891101|KRT17|3872|keratin 17##DQ894283|KRT17|3872|keratin 17##BC072018|KRT17|3872|keratin 17##BC072019|KRT17|3872|keratin 17##BC011901|KRT17|3872|keratin 17##X62571|KRT17|3872|keratin 17##BC000159|KRT17|3872|keratin 17##BC056421|KRT17|3872|keratin 17##AK304373|KRT17|3872|keratin 17##AK095342|KRT17|3872|keratin 17##NM_000422|KRT17|3872|keratin 17##S79867|KRT16|3868|keratin 16##DQ891307|KRT16|3868|keratin 16##DQ896818|KRT16|3868|keratin 16##AF061812|KRT16|3868|keratin 16##BC039169|KRT16|3868|keratin 16##AK290853|KRT16|3868|keratin 16##NM_005557|KRT16|3868|keratin 16##BT007186|KRT14|3861|keratin 14##DQ890733|KRT14|3861|keratin 14##DQ892997|KRT14|3861|keratin 14##DQ893905|KRT14|3861|keratin 14##BC042437|KRT14|3861|keratin 14##BC002690|KRT14|3861|keratin 14##BC019097|KRT14|3861|keratin 14##BC094830|KRT14|3861|keratin 14##NM_000526|KRT14|3861|keratin 14##NM_005801|EIF1|10209|eukaryotic translation initiation factor 1##AL050005|EIF1|10209|eukaryotic translation initiation factor 1##AK311862|EIF1|10209|eukaryotic translation initiation factor 1##AK311209|EIF1|10209|eukaryotic translation initiation factor 1##BC005118|EIF1|10209|eukaryotic translation initiation factor 1##L26247|EIF1|10209|eukaryotic translation initiation factor 1##AF083441|EIF1|10209|eukaryotic translation initiation factor 1##BC008710|EIF1|10209|eukaryotic translation initiation factor 1##AF100737|EIF1|10209|eukaryotic translation initiation factor 1##AJ012375|EIF1|10209|eukaryotic translation initiation factor 1##DQ896700|EIF1|10209|eukaryotic translation initiation factor 1##EU176404|EIF1|10209|eukaryotic translation initiation factor 1##BT006645|EIF1|10209|eukaryotic translation initiation factor 1##CR457051|EIF1|10209|eukaryotic translation initiation factor 1	0.990231	CTCF.p2:6:0.990
chr17	72357732	72357830	reg1025609.p1	5.681	+	NM_153209 TSC_hg19_v1_chr17_+_72322355 BC067749 BC026362 BC110989 AK094619 BC143327 BC093631 BC104852	-35374	+	BC039582 NM_001172810 NM_023036 BC033013 AF250288	-87375	+	BX647912 NM_052869	-113277	+	NM_001080466	176	-	BC143807 AB196530 AB528868 AY288421 NM_181790	5813	+	BC110848 BC004925 BC069202 NM_022036 BC125080 BC125081	69823	+	NM_153209|KIF19|124602|kinesin family member 19##BC067749|KIF19|124602|kinesin family member 19##BC026362|KIF19|124602|kinesin family member 19##BC110989|KIF19|124602|kinesin family member 19##AK094619|KIF19|124602|kinesin family member 19##BC143327|KIF19|124602|kinesin family member 19##BC093631|KIF19|124602|kinesin family member 19##BC104852|KIF19|124602|kinesin family member 19##BC039582|DNAI2|64446|dynein, axonemal, intermediate chain 2##NM_001172810|DNAI2|64446|dynein, axonemal, intermediate chain 2##NM_023036|DNAI2|64446|dynein, axonemal, intermediate chain 2##BC033013|DNAI2|64446|dynein, axonemal, intermediate chain 2##AF250288|DNAI2|64446|dynein, axonemal, intermediate chain 2##BX647912|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_052869|TTYH2|94015|tweety homolog 2 (Drosophila)##NM_001080466|BTBD17|388419|BTB (POZ) domain containing 17##BC143807|GPR142|350383|G protein-coupled receptor 142##AB196530|GPR142|350383|G protein-coupled receptor 142##AY288421|GPR142|350383|G protein-coupled receptor 142##NM_181790|GPR142|350383|G protein-coupled receptor 142##BC110848|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC004925|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC069202|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_022036|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125080|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125081|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	0.993884	CTCF.p2:13:0.994
chr3	13089144	13089260	reg1025770.p1	5.681	+	TSC_hg19_v1_chr3_-_13057189 BC071805	-31984	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	-80094	-	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	-147594	-	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	25396	-	AB020713 TSC_hg19_v1_chr3_-_13384784	295563	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	372530	-	AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1##AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##AB020713|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa	0.818378	CTCF.p2:-2:0.742
chr9	139002425	139002560	reg1024385.p3	5.681	+	TSC_hg19_v1_chr9_-_138987136 BC015649 AK129748 NM_144653	-15357	-	TSC_hg19_v1_chr9_-_138853220 AF176796 BC004967 NM_016172	-149289	-	CU678830 DQ892567 DQ895782 TSC_hg19_v1_chr9_-_138853062 BC011822	-149453	-	BC092490 BC111053 TSC_hg19_v1_chr9_-_139010485	7943	-	BC014304 BC013282 TSC_hg19_v1_chr9_-_139010700 AK023162 AK091349 AX746927 BC021231	8178	-	TSC_hg19_v1_chr9_-_139010722 NM_152833	8237	-	BC015649|NACC2|138151|NACC family member 2, BEN and BTB (POZ) domain containing##NM_144653|NACC2|138151|NACC family member 2, BEN and BTB (POZ) domain containing##AF176796|UBAC1|10422|UBA domain containing 1##BC004967|UBAC1|10422|UBA domain containing 1##NM_016172|UBAC1|10422|UBA domain containing 1##DQ892567|UBAC1|10422|UBA domain containing 1##DQ895782|UBAC1|10422|UBA domain containing 1##BC011822|UBAC1|10422|UBA domain containing 1##BC092490|C9orf69|90120|chromosome 9 open reading frame 69##BC111053|C9orf69|90120|chromosome 9 open reading frame 69##BC014304|C9orf69|90120|chromosome 9 open reading frame 69##BC013282|C9orf69|90120|chromosome 9 open reading frame 69##AK023162|C9orf69|90120|chromosome 9 open reading frame 69##AK091349|C9orf69|90120|chromosome 9 open reading frame 69##BC021231|C9orf69|90120|chromosome 9 open reading frame 69##NM_152833|C9orf69|90120|chromosome 9 open reading frame 69	1.049237	CTCF.p2:0:0.991
chr11	123346339	123346500	reg1025879.p2	5.680	+	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	-280414	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	-280517	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	-413540	-	TSC_hg19_v1_chr11_+_123396366 AK127457	49936	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	50085	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	84554	+	AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AK127457|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B	0.99923	CTCF.p2:5:0.999
chr15	101829267	101829359	reg1024249.p1	5.680	+	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	-11650	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	-37178	-	AB071402 TSC_hg19_v1_chr15_-_101791795	-37577	-	TSC_hg19_v1_chr15_-_101835402 AB528428 CU692724 AJ130971 AJ130972 DQ892838 DQ896084 BC071717	6068	-	TSC_hg19_v1_chr15_-_101835457 AK223110 AK312200 X13482 BC022816 AK290078 AK223070 BC067846 NM_003090	6118	-	TSC_hg19_v1_chr15_-_102029640 AM491522	200324	-	AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##AJ130971|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AJ130972|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##DQ892838|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##DQ896084|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC071717|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK223110|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK312200|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##X13482|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC022816|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK290078|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK223070|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC067846|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##NM_003090|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AM491522|PCSK6|5046|proprotein convertase subtilisin/kexin type 6	0.963263	CTCF.p2:-9:0.963
chr18	61646733	61646835	reg1025399.p1	5.680	+	NM_001031848 NM_002640 NM_198833 AK300391 L40377 TSC_hg19_v1_chr18_+_61637345 BC034528 U92984 BX571754 AK313782	-9471	+	NM_001123366	-30197	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	-64040	+	AJ007611 NM_033646	1770703	+	TSC_hg19_v1_chr18_+_63417845 BC036786	1771082	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	1771418	+	NM_001031848|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_002640|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_198833|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK300391|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##L40377|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BC034528|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##U92984|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BX571754|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK313782|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2	0.922489	CTCF.p2:6:0.922
chr4	113188118	113188224	reg1025571.p1	5.680	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	-35087	+	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	-121557	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1624893	-	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	18830	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	30356	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	249161	-	NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2	0.993323	CTCF.p2:-9:0.993
chr4	76624114	76624294	reg1025110.p3	5.680	+	TSC_hg19_v1_chr4_-_76598625 NM_203504 NM_203505	-25552	-	TSC_hg19_v1_chr4_-_76598595 BC011731 AK291772	-25625	-	AF053535 AF145284 TSC_hg19_v1_chr4_-_76598560	-25644	-	TSC_hg19_v1_chr4_-_76649558 AK311578	25471	-	TSC_hg19_v1_chr4_+_76649761 BC016672 AL832010 BC006398	25560	+	TSC_hg19_v1_chr4_+_76649814 AK314289	25611	+	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)	0.0	
chr7	150574308	150574406	reg1025649.p1	5.680	+	TSC_hg19_v1_chr7_+_150549604 U11863 AK092514 AK296638 AK307278 AK314806 BC014093 M55602	-24745	+	TSC_hg19_v1_chr7_+_150549567 U11862 NM_001091	-24806	+	BC004358 BC014586 NM_014020 AK097304	-75952	-	TSC_hg19_v1_chr7_-_150652893 BC127672 BC127673 BC080563 NM_001204798 NM_172057 DQ120125	78570	-	TSC_hg19_v1_chr7_-_150675385 DQ525913 NM_000238 NM_172056	101012	-	NM_000603 BC063294 AK300390	113810	+	U11863|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK092514|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK296638|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##AK314806|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##BC014093|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##M55602|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##U11862|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##NM_001091|ABP1|26|amiloride binding protein 1 (amine oxidase (copper-containing))##BC004358|TMEM176B|28959|transmembrane protein 176B##BC014586|TMEM176B|28959|transmembrane protein 176B##NM_014020|TMEM176B|28959|transmembrane protein 176B##AK097304|TMEM176B|28959|transmembrane protein 176B##BC127673|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_001204798|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172057|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##DQ120125|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##DQ525913|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_000238|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172056|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)	0.276791	CTCF.p2:18:0.277
chr1	121189292	121189421	reg1023372.p1	5.679	+	AK291502 AK307244 AK311502 NM_001004340 NM_001017986 NM_001244910 TSC_hg19_v1_chr1_-_120935945	-253404	-	L03419 L03420 TSC_hg19_v1_chr1_-_120935918 BC110416 AK308886	-253447	-	NM_001100910	-350352	+	CR936796 TSC_hg19_v1_chr1_+_142618815 AK056396 AF277188	21429490	+	TSC_hg19_v1_chr1_-_143467618 BC070106	22278269	-	BC071624 BC132962 AK097058 AK310056 TSC_hg19_v1_chr1_-_143744413 AK310186 AK309393	22555049	-	AK291502|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK307244|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK311502|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001004340|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001017986|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001244910|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##L03419|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##L03420|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##BC110416|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK308886|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001100910|FAM72B|653820|family with sequence similarity 72, member B##BC071624|FLJ39739|388685|uncharacterized FLJ39739##BC132962|LOC100286793|100286793|uncharacterized LOC100286793##AK097058|FLJ39739|388685|uncharacterized FLJ39739##AK310056|FLJ39739|388685|uncharacterized FLJ39739##AK310186|FLJ39739|388685|uncharacterized FLJ39739##AK309393|FLJ39739|388685|uncharacterized FLJ39739	0.999203	CTCF.p2:-2:0.999
chr6	158035228	158035347	reg1026321.p1	5.679	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-232748	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-290070	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-290703	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	209002	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	209087	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	367600	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.0	
chr6	20564534	20564671	reg1023694.p1	5.679	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-29879	+	CR749285 NM_001243076	-160569	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-162499	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	1029770	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	1102057	+	BC015850 NM_000948	1733127	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.715954	CTCF.p2:7:0.716
chr8	145669558	145669648	reg1023917.p1	5.679	+	TSC_hg19_v1_chr8_-_145653927 NM_016208 NM_183057 AK310062	-15679	-	TSC_hg19_v1_chr8_-_145653903 BC050438	-15699	-	BC050712 TSC_hg19_v1_chr8_-_145653897 BC050713 AK026865 AK090942 AK091979	-15714	-	TSC_hg19_v1_chr8_-_145669773 BC008782	174	-	TSC_hg19_v1_chr8_-_145669825 NM_013432	224	-	AK094514 NM_138496	20814	-	NM_016208|VPS28|51160|vacuolar protein sorting 28 homolog (S. cerevisiae)##NM_183057|VPS28|51160|vacuolar protein sorting 28 homolog (S. cerevisiae)##AK310062|VPS28|51160|vacuolar protein sorting 28 homolog (S. cerevisiae)##BC050438|VPS28|51160|vacuolar protein sorting 28 homolog (S. cerevisiae)##BC050712|VPS28|51160|vacuolar protein sorting 28 homolog (S. cerevisiae)##BC050713|VPS28|51160|vacuolar protein sorting 28 homolog (S. cerevisiae)##AK026865|VPS28|51160|vacuolar protein sorting 28 homolog (S. cerevisiae)##AK090942|VPS28|51160|vacuolar protein sorting 28 homolog (S. cerevisiae)##AK091979|VPS28|51160|vacuolar protein sorting 28 homolog (S. cerevisiae)##BC008782|TONSL|4796|tonsoku-like, DNA repair protein##NM_013432|TONSL|4796|tonsoku-like, DNA repair protein##AK094514|CYHR1|50626|cysteine/histidine-rich 1##NM_138496|CYHR1|50626|cysteine/histidine-rich 1	0.740708	CTCF.p2:-12:0.441	CTCF.p2:-16:0.300
chr18	69753809	69753919	reg1025867.p1	5.678	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-1797603	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-1797697	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-1880926	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	456911	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	457866	-	AF448839 NM_138999	779069	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.548137	CTCF.p2:9:0.548
chr4	54569040	54569220	reg1023352.p2	5.678	+	AK056823 NM_001126328 TSC_hg19_v1_chr4_-_54457761	-111386	-	BC022983 TSC_hg19_v1_chr4_-_54457654	-111487	-	TSC_hg19_v1_chr4_-_54424402 NM_032622	-144712	-	AB463552 DQ890711 DQ893893 TSC_hg19_v1_chr4_-_54930576	361396	-	TSC_hg19_v1_chr4_-_54930764 AF159423 BC034691	361605	-	TSC_hg19_v1_chr4_-_54930773 AK312427 NM_012110	361667	-	AK056823|LNX1|84708|ligand of numb-protein X 1##NM_001126328|LNX1|84708|ligand of numb-protein X 1##BC022983|LNX1|84708|ligand of numb-protein X 1##NM_032622|LNX1|84708|ligand of numb-protein X 1##DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2##DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2##AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2##BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2##AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	0.0	
chr8	7106130	7106269	reg1026345.p2	5.678	+	BC107079 BC069690 NM_021010	-191945	-	BC093791 BC112188 BC069423 M21130 M23281 BC119706 X52053 BC027917 M26602 NM_005217 X13621 NM_001042500 NM_004084	-230400	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	-249499	-	NM_001164452 NM_001164456	8226	+	NM_001164452 NM_001164456	31092	+	NM_001164455	38714	+	BC107079|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC069690|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##NM_021010|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M23281|DEFA3|1668|defensin, alpha 3, neutrophil-specific##BC119706|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X52053|DEFA1|1667|defensin, alpha 1##BC027917|DEFA3|1668|defensin, alpha 3, neutrophil-specific##M26602|DEFA1|1667|defensin, alpha 1##NM_005217|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X13621|DEFA3|1668|defensin, alpha 3, neutrophil-specific##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164455|FAM90A5|441315|family with sequence similarity 90, member A5	1.711518	CTCF.p2:-26:0.971	CTCF.p2:76:0.740
chr11	10792309	10792449	reg1029792.p1	5.677	+	TSC_hg19_v1_chr11_+_10772795 BC014335 AK291794 BC020951 BC058914 NM_014633 D63875	-19552	+	TSC_hg19_v1_chr11_-_10715507 NM_001100163 NM_001206880 NM_001206881 NM_130385	-76861	-	TSC_hg19_v1_chr11_-_10715300 AK296336	-77070	-	BC065276 NM_001172705 BX647799 AK123338	37195	-	TSC_hg19_v1_chr11_+_10829631 AK055888	37222	+	TSC_hg19_v1_chr11_-_10830044 AK302886 AK310738	37677	-	BC014335|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK291794|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC058914|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##NM_014633|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##D63875|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##NM_001100163|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001206880|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001206881|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_130385|MRVI1|10335|murine retrovirus integration site 1 homolog##AK296336|MRVI1|10335|murine retrovirus integration site 1 homolog##BC065276|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##NM_001172705|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##BX647799|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK123338|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK055888|LOC144017|144017|uncharacterized LOC144017##AK302886|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK310738|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	0.996494	CTCF.p2:0:0.996
chr12	9102639	9102770	reg1023322.p1	5.677	+	TSC_hg19_v1_chr12_-_9102262 NM_001207024 NM_002355	-395	-	TSC_hg19_v1_chr12_-_9102242 AK291143 M16985 AK222792 BC024206 AK312689	-486	-	TSC_hg19_v1_chr12_+_9067153 AB209063 AK293893 NM_004426 BC073964 U89277 BC157850	-35435	+	AK316337 BC012621 AK301367 AF081675 AF097358 NM_005810 AF034952 DQ892820 DQ896066	39479	+	TSC_hg19_v1_chr12_-_9268457 AB384991 AK307832 AK312482 AB209614	165752	-	TSC_hg19_v1_chr12_-_9268510 M11313 BC040071 AY591530	165789	-	NM_001207024|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##NM_002355|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK291143|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##M16985|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK222792|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##BC024206|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK312689|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AB209063|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##AK293893|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##NM_004426|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC073964|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##U89277|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC157850|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AK307832|A2M|2|alpha-2-macroglobulin##AK312482|A2M|2|alpha-2-macroglobulin##AB209614|A2M|2|alpha-2-macroglobulin##M11313|A2M|2|alpha-2-macroglobulin##BC040071|A2M|2|alpha-2-macroglobulin##AY591530|A2M|2|alpha-2-macroglobulin	0.0	
chr17	69760828	69760980	reg1022568.p1	5.677	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-1595208	+	BC033038 NM_170742	-1659910	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-1689474	+	TSC_hg19_v1_chr17_-_70116937 AL833139	356034	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	356255	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	356266	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.620186	CTCF.p2:-43:0.620
chr20	50700331	50700431	reg1025665.p2	5.677	+	AY170621 AY170622 AY172738 BC111714 AK001666 NM_020436	-281385	-	TSC_hg19_v1_chr20_-_50384925 NM_006045	-315453	-	TSC_hg19_v1_chr20_-_50384875 AB385363 AB014511 AK299064	-315503	-	BT009760 AB527686 BC021087 AK001744 TSC_hg19_v1_chr20_-_50808313 AK090547 BC031524 AK001596 AK222712	107874	-	BC012759 BC041622 NM_018197 NM_022088 NM_199426 NM_199427	108142	-	BX640770 NM_173485	888564	+	AY170621|SALL4|57167|sal-like 4 (Drosophila)##AY170622|SALL4|57167|sal-like 4 (Drosophila)##AY172738|SALL4|57167|sal-like 4 (Drosophila)##BC111714|SALL4|57167|sal-like 4 (Drosophila)##AK001666|SALL4|57167|sal-like 4 (Drosophila)##NM_020436|SALL4|57167|sal-like 4 (Drosophila)##NM_006045|ATP9A|10079|ATPase, class II, type 9A##AB014511|ATP9A|10079|ATPase, class II, type 9A##AK299064|ATP9A|10079|ATPase, class II, type 9A##BT009760|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC021087|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001744|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK090547|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC031524|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001596|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK222712|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC012759|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC041622|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_018197|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_022088|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199426|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199427|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2	0.518302	CTCF.p2:6:0.518
chrX	45708869	45708971	reg1021572.p1	5.677	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	-648807	-	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-976484	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-1005607	+	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	597791	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	695936	-	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	696024	+	BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588	0.068981	
chr8	27943166	27943309	reg1024952.p2	5.676	+	AB075870 NM_001010906	-1850	-	NM_173833	-92869	-	TSC_hg19_v1_chr8_-_27695574 AK301836	-247678	-	NM_018091 TSC_hg19_v1_chr8_+_27950679 AK302140 AK296475 AK022626 AK295574 AK001284 AK293424 AK315985 AK316053 AK298265 BC001240 AL834273 AB463602 AM392633	7420	+	NM_006228 U48263 TSC_hg19_v1_chr8_+_28174784 AK289633 AY335948 BC034758	231488	+	BC001237 TSC_hg19_v1_chr8_-_28243694	300405	-	AB075870|C8orf80|389643|chromosome 8 open reading frame 80##NM_001010906|C8orf80|389643|chromosome 8 open reading frame 80##NM_173833|SCARA5|286133|scavenger receptor class A, member 5 (putative)##AK301836|PBK|55872|PDZ binding kinase##NM_018091|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK302140|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK296475|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK022626|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK295574|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK001284|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK293424|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK315985|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK316053|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK298265|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##BC001240|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AL834273|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AM392633|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##NM_006228|PNOC|5368|prepronociceptin##U48263|PNOC|5368|prepronociceptin##AK289633|PNOC|5368|prepronociceptin##AY335948|PNOC|5368|prepronociceptin##BC034758|PNOC|5368|prepronociceptin##BC001237|ZNF395|55893|zinc finger protein 395	0.632028	CTCF.p2:2:0.632
chr8	42270127	42270226	reg1006850.p2	5.676	+	TSC_hg19_v1_chr8_+_42249394 AK307224 AK058201 AK308760 BC056870 BC002456	-20765	+	TSC_hg19_v1_chr8_+_42249386 AF038962	-20789	+	NM_001135694 NM_005662 TSC_hg19_v1_chr8_+_42249355	-20858	+	NM_001135676	126121	+	TSC_hg19_v1_chr8_-_42396648 AK314774	126475	-	TSC_hg19_v1_chr8_+_42396791 NM_138436 BC013035 NM_001135674 NM_001135675	126651	+	AK307224|VDAC3|7419|voltage-dependent anion channel 3##AK058201|VDAC3|7419|voltage-dependent anion channel 3##AK308760|VDAC3|7419|voltage-dependent anion channel 3##BC056870|VDAC3|7419|voltage-dependent anion channel 3##AF038962|VDAC3|7419|voltage-dependent anion channel 3##NM_001135694|VDAC3|7419|voltage-dependent anion channel 3##NM_005662|VDAC3|7419|voltage-dependent anion channel 3##NM_001135676|C8orf40|114926|chromosome 8 open reading frame 40##AK314774|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##NM_138436|C8orf40|114926|chromosome 8 open reading frame 40##BC013035|C8orf40|114926|chromosome 8 open reading frame 40##NM_001135674|C8orf40|114926|chromosome 8 open reading frame 40##NM_001135675|C8orf40|114926|chromosome 8 open reading frame 40	0.0	
chrX	139844351	139844509	reg1026590.p1	5.676	+	TSC_hg19_v1_chrX_+_139791923 AK054978	-52503	+	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	-257178	-	BC137148 BC137149 NM_001013403	-796754	-	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	22222	-	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	240376	+	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	252381	+	AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1	0.981651	CTCF.p2:0:0.982
chr15	51981211	51981324	reg1024945.p2	5.675	+	AF453583 NM_001165257 NM_013243 AF078851 TSC_hg19_v1_chr15_+_51973699 AY359093 AK075314 AK296466 AK290175	-7636	+	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	-66294	-	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	-347473	+	AK129759 DQ892424 DQ895638 TSC_hg19_v1_chr15_-_52029856	48609	-	TSC_hg19_v1_chr15_-_52030323 AY125955 BC033515 NM_153374	48992	-	NM_001143917 TSC_hg19_v1_chr15_-_52043732 BC022075	62448	-	AF453583|SCG3|29106|secretogranin III##NM_001165257|SCG3|29106|secretogranin III##NM_013243|SCG3|29106|secretogranin III##AF078851|SCG3|29106|secretogranin III##AY359093|SCG3|29106|secretogranin III##AK075314|SCG3|29106|secretogranin III##AK296466|SCG3|29106|secretogranin III##AK290175|SCG3|29106|secretogranin III##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2##NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##AK129759|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ892424|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ895638|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##AY125955|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##BC033515|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##NM_153374|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##NM_001143917|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##BC022075|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	0.031377	
chr1	2023174	2023277	reg1026489.p2	5.674	+	NM_001242874 AK294782	-17758	+	AK294649 NM_001033581	-18141	+	TSC_hg19_v1_chr1_+_1981920 BC014270 NM_002744 BC008058 AB464093 DQ892929 DQ893922 DQ896178 CU675909 AK290995 BT007082 L14283 Z15108	-41231	+	NM_001033582	12929	+	TSC_hg19_v1_chr1_-_2126212 BC041041 AF469129 BC066360 AK055593 BC103992 NM_182533	102954	-	AK127994 NM_001146310	115946	-	NM_001242874|PRKCZ|5590|protein kinase C, zeta##AK294782|PRKCZ|5590|protein kinase C, zeta##AK294649|PRKCZ|5590|protein kinase C, zeta##NM_001033581|PRKCZ|5590|protein kinase C, zeta##BC014270|PRKCZ|5590|protein kinase C, zeta##NM_002744|PRKCZ|5590|protein kinase C, zeta##BC008058|PRKCZ|5590|protein kinase C, zeta##DQ892929|PRKCZ|5590|protein kinase C, zeta##DQ893922|PRKCZ|5590|protein kinase C, zeta##DQ896178|PRKCZ|5590|protein kinase C, zeta##AK290995|PRKCZ|5590|protein kinase C, zeta##BT007082|PRKCZ|5590|protein kinase C, zeta##L14283|PRKCZ|5590|protein kinase C, zeta##Z15108|PRKCZ|5590|protein kinase C, zeta##NM_001033582|PRKCZ|5590|protein kinase C, zeta##BC041041|C1orf86|199990|chromosome 1 open reading frame 86##AF469129|C1orf86|199990|chromosome 1 open reading frame 86##BC066360|C1orf86|199990|chromosome 1 open reading frame 86##AK055593|C1orf86|199990|chromosome 1 open reading frame 86##BC103992|C1orf86|199990|chromosome 1 open reading frame 86##NM_182533|C1orf86|199990|chromosome 1 open reading frame 86##AK127994|C1orf86|199990|chromosome 1 open reading frame 86##NM_001146310|C1orf86|199990|chromosome 1 open reading frame 86	0.147497	
chr1	36912066	36912197	reg1031118.p1	5.674	+	AF394685 TSC_hg19_v1_chr1_-_36863508 AF166092 BC007623 NM_032881	-48638	-	TSC_hg19_v1_chr1_-_36851517 AK075048	-60608	-	AL834137 NM_032017 BC008344 TSC_hg19_v1_chr1_-_36851499 BC007835 AY198395	-60640	-	AB079075 AK098541 BC018069 NM_145047 NM_206837	3896	-	TSC_hg19_v1_chr1_-_36929984 AB049946 AB209905 AK021626 BC031336 AF265439 AK315441 AK302633 NM_031280	17828	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	36353	-	AF394685|LSM10|84967|LSM10, U7 small nuclear RNA associated##AF166092|LSM10|84967|LSM10, U7 small nuclear RNA associated##BC007623|LSM10|84967|LSM10, U7 small nuclear RNA associated##NM_032881|LSM10|84967|LSM10, U7 small nuclear RNA associated##AK075048|STK40|83931|serine/threonine kinase 40##AL834137|STK40|83931|serine/threonine kinase 40##NM_032017|STK40|83931|serine/threonine kinase 40##BC008344|STK40|83931|serine/threonine kinase 40##BC007835|STK40|83931|serine/threonine kinase 40##AY198395|STK40|83931|serine/threonine kinase 40##AB079075|OSCP1|127700|organic solute carrier partner 1##AK098541|OSCP1|127700|organic solute carrier partner 1##BC018069|OSCP1|127700|organic solute carrier partner 1##NM_145047|OSCP1|127700|organic solute carrier partner 1##NM_206837|OSCP1|127700|organic solute carrier partner 1##AB049946|MRPS15|64960|mitochondrial ribosomal protein S15##AB209905|MRPS15|64960|mitochondrial ribosomal protein S15##AK021626|MRPS15|64960|mitochondrial ribosomal protein S15##BC031336|MRPS15|64960|mitochondrial ribosomal protein S15##AF265439|MRPS15|64960|mitochondrial ribosomal protein S15##AK315441|MRPS15|64960|mitochondrial ribosomal protein S15##AK302633|MRPS15|64960|mitochondrial ribosomal protein S15##NM_031280|MRPS15|64960|mitochondrial ribosomal protein S15##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)	0.221336	CTCF.p2:-12:0.221
chr2	242604960	242605103	reg1025722.p1	5.674	+	TSC_hg19_v1_chr2_+_242577107 AK027763 AK296818 AK298109 BX648007 AB023160 AK027462 BC000719 AJ504652	-27921	+	TSC_hg19_v1_chr2_+_242577084 AL080168 NM_013325 NM_178326	-27996	+	TSC_hg19_v1_chr2_-_242576723 NM_015963	-28272	-	CR541986 CR542015 TSC_hg19_v1_chr2_-_242626210 X54729 BC001827	21179	-	TSC_hg19_v1_chr2_-_242626231 AK223434 BC147006 BC147010 BC171894 BC171902 BC171903 NM_001165031 NM_012145	21272	-	AB593140 TSC_hg19_v1_chr2_+_242626482	21445	+	AK027763|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##AK296818|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##AK298109|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##BX648007|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##AB023160|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##AK027462|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##BC000719|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##AJ504652|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##AL080168|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##NM_013325|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##NM_178326|ATG4B|23192|ATG4 autophagy related 4 homolog B (S. cerevisiae)##NM_015963|THAP4|51078|THAP domain containing 4##CR541986|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##CR542015|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##X54729|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC001827|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##AK223434|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC147006|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC147010|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171894|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171902|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171903|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##NM_001165031|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##NM_012145|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)	0.830671	CTCF.p2:-3:0.831
chr5	153847518	153847698	reg1000287.p2	5.674	+	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	-21998	+	TSC_hg19_v1_chr5_+_153825535 AK021588 NM_001131062 NM_001131063 NM_024632	-22089	+	TSC_hg19_v1_chr5_-_153825380 BC042059 AK095428	-22241	-	TSC_hg19_v1_chr5_-_153857790 BC021190	10180	-	TSC_hg19_v1_chr5_-_153857823 AF061756 NM_004821	10214	-	BC001460 NM_015315 CU674716	244865	+	AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like##AK021588|SAP30L|79685|SAP30-like##NM_001131062|SAP30L|79685|SAP30-like##NM_001131063|SAP30L|79685|SAP30-like##NM_024632|SAP30L|79685|SAP30-like##BC042059|FLJ38109|386627|uncharacterized LOC386627##AK095428|FLJ38109|386627|uncharacterized LOC386627##BC021190|HAND1|9421|heart and neural crest derivatives expressed 1##AF061756|HAND1|9421|heart and neural crest derivatives expressed 1##NM_004821|HAND1|9421|heart and neural crest derivatives expressed 1##BC001460|LARP1|23367|La ribonucleoprotein domain family, member 1##NM_015315|LARP1|23367|La ribonucleoprotein domain family, member 1	0.0	
chr10	64493154	64493334	reg1020041.p2	5.673	+	AJ505150 NM_199452	-213038	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-359201	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-464705	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	71298	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	71413	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	82853	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.014131	
chr1	146051057	146051182	reg1027279.p1	5.673	+	NM_001097616	-167252	+	BT006679 DQ890650 DQ893830 AB528816 TSC_hg19_v1_chr1_-_145827047 BC003187 AK316371 BC146880 AF132947 U78723 BC067816 AB097024 AB097025 AK223223 AK299995 AK302266 AY358966 AK021758 AK297145 NM_001097612 NM_001097613	-224103	-	TSC_hg19_v1_chr1_+_145727712 AK313100 AK298269 BC006496 BC006518 AF012281	-323400	+	AF419617 NM_001101663	17125	-	BC136292 NM_183372 AL832622	31579	-	AJ224538 HQ257946 TSC_hg19_v1_chr1_-_146643798	592646	-	NM_001097616|GPR89C|728932|G protein-coupled receptor 89C##BT006679|GPR89A|653519|G protein-coupled receptor 89A##DQ890650|GPR89B|51463|G protein-coupled receptor 89B##DQ893830|GPR89A|653519|G protein-coupled receptor 89A##BC003187|GPR89A|653519|G protein-coupled receptor 89A##AK316371|GPR89A|653519|G protein-coupled receptor 89A##BC146880|GPR89A|653519|G protein-coupled receptor 89A##AF132947|GPR89A|653519|G protein-coupled receptor 89A##U78723|GPR89B|51463|G protein-coupled receptor 89B##BC067816|GPR89A|653519|G protein-coupled receptor 89A##AB097024|GPR89A|653519|G protein-coupled receptor 89A##AB097025|GPR89A|653519|G protein-coupled receptor 89A##AK223223|GPR89A|653519|G protein-coupled receptor 89A##AK299995|GPR89A|653519|G protein-coupled receptor 89A##AK302266|GPR89B|51463|G protein-coupled receptor 89B##AY358966|GPR89A|653519|G protein-coupled receptor 89A##AK021758|GPR89A|653519|G protein-coupled receptor 89A##AK297145|GPR89A|653519|G protein-coupled receptor 89A##NM_001097612|GPR89A|653519|G protein-coupled receptor 89A##NM_001097613|GPR89A|653519|G protein-coupled receptor 89A##AK313100|PDZK1|5174|PDZ domain containing 1##AK298269|PDZK1|5174|PDZ domain containing 1##BC006496|PDZK1|5174|PDZ domain containing 1##BC006518|PDZK1|5174|PDZ domain containing 1##AF012281|PDZK1|5174|PDZ domain containing 1##AF419617|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_001101663|NBPF24|728912|neuroblastoma breakpoint family, member 24##BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11##AL832622|NBPF24|728912|neuroblastoma breakpoint family, member 24##AJ224538|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit##HQ257946|PRKAB2|5565|protein kinase, AMP-activated, beta 2 non-catalytic subunit	0.97652	CTCF.p2:-25:0.977
chr17	17472105	17472244	reg1023834.p1	5.673	+	AB528221 AF153192 AF498923 AM392981 AM393158 AM393716 CU676146 AF172846 AF069506 BC042688 AF177335 TSC_hg19_v1_chr17_-_17399710 BC018041 AK294073 AK312796 NM_001199989 NM_016084	-72572	-	TSC_hg19_v1_chr17_+_17398334 CU676147	-73788	+	TSC_hg19_v1_chr17_+_17380313 AK001055 NM_018019 BC000647 BC010906 BC104988 BC112029 AB463869	-91859	+	CR457099 TSC_hg19_v1_chr17_-_17480354	8165	-	AF176807 NM_148173	8604	-	AF176806 TSC_hg19_v1_chr17_-_17485724	13533	-	AF153192|RASD1|51655|RAS, dexamethasone-induced 1##AF498923|RASD1|51655|RAS, dexamethasone-induced 1##AM392981|RASD1|51655|RAS, dexamethasone-induced 1##AM393158|RASD1|51655|RAS, dexamethasone-induced 1##AM393716|RASD1|51655|RAS, dexamethasone-induced 1##AF172846|RASD1|51655|RAS, dexamethasone-induced 1##AF069506|RASD1|51655|RAS, dexamethasone-induced 1##BC042688|RASD1|51655|RAS, dexamethasone-induced 1##AF177335|RASD1|51655|RAS, dexamethasone-induced 1##BC018041|RASD1|51655|RAS, dexamethasone-induced 1##AK294073|RASD1|51655|RAS, dexamethasone-induced 1##AK312796|RASD1|51655|RAS, dexamethasone-induced 1##NM_001199989|RASD1|51655|RAS, dexamethasone-induced 1##NM_016084|RASD1|51655|RAS, dexamethasone-induced 1##AK001055|MED9|55090|mediator complex subunit 9##NM_018019|MED9|55090|mediator complex subunit 9##BC000647|MED9|55090|mediator complex subunit 9##BC010906|MED9|55090|mediator complex subunit 9##BC104988|MED9|55090|mediator complex subunit 9##BC112029|MED9|55090|mediator complex subunit 9##CR457099|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF176807|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_148173|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF176806|PEMT|10400|phosphatidylethanolamine N-methyltransferase	0.685888	CTCF.p2:39:0.686
chr12	124993518	124993607	reg1025129.p1	5.671	+	AK126577 NM_181709	-219853	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-535833	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-536363	-	TSC_hg19_v1_chr12_-_125002875 BC033087	9297	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	58513	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	354743	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr12	46776987	46777111	reg1025239.p1	5.671	+	TSC_hg19_v1_chr12_-_46766619 NM_018976	-10446	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-10760	-	NM_001077484 NM_030674	-113842	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	442707	-	TSC_hg19_v1_chr12_+_47473404 BC072670	696348	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	696534	-	NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2	0.0	
chr16	24082305	24082454	reg1028046.p1	5.671	+	AB587511 EU832791 GQ129253 TSC_hg19_v1_chr16_+_23847512	-234873	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	-234984	+	TSC_hg19_v1_chr16_+_23847321 BC036472	-235047	+	BC037899 NM_006539 AK095553	184495	+	AK055453 TSC_hg19_v1_chr16_+_24267474	185095	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	185319	+	EU832791|PRKCB|5579|protein kinase C, beta##GQ129253|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	0.835409	CTCF.p2:8:0.835
chr5	33380045	33380166	reg1022536.p1	5.671	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	-668300	+	AK290870 NM_000908 NM_001204375 M59305	-668617	+	NM_001204376 AK300094 AK308301	-669355	+	AK292346 TSC_hg19_v1_chr5_+_33440874 NM_152295	60751	+	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	61034	+	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	511940	-	BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK292346|TARS|6897|threonyl-tRNA synthetase##NM_152295|TARS|6897|threonyl-tRNA synthetase##AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	0.0	
chr8	10190328	10190448	reg1023174.p1	5.671	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	-237325	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	-278509	+	TSC_hg19_v1_chr8_+_9911765 AY958429	-278619	+	BC033497 NM_001197020 NM_198464 AY358867	192679	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	322252	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	339771	+	AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AY958429|MSRA|4482|methionine sulfoxide reductase A##BC033497|PRSS55|203074|protease, serine, 55##NM_001197020|PRSS55|203074|protease, serine, 55##NM_198464|PRSS55|203074|protease, serine, 55##AY358867|PRSS55|203074|protease, serine, 55##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74	0.999504	CTCF.p2:21:1.000
chr8	8035118	8035220	reg1024790.p2	5.671	+	AK292586 NM_001193630	-251311	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-282965	+	AF295370 AJ237673 NM_018661 AB037972 AB590071 AF217245 AF516673	-296244	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	50973	+	TSC_hg19_v1_chr8_-_8175862 AF075060	140719	-	AK122582 NM_001080826	204053	-	AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF295370|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2	0.0	
chr2	30454318	30454499	reg1026942.p1	5.670	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-84532	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	-84575	+	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	-84638	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	94	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	215740	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	575885	-	AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13	0.0	
chr3	56741618	56741724	reg1021841.p1	5.670	+	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-24464	-	BC029354 NM_015224	-43598	-	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	-150425	+	AK293864 AB209661 NM_001128616	67998	-	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	94240	-	AY221117 NM_181727 BC126274 BC136498	352832	+	BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##BC029354|FAM208A|23272|family with sequence similarity 208, member A##NM_015224|FAM208A|23272|family with sequence similarity 208, member A##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12	0.0	
chrX	12098496	12098612	reg1023233.p1	5.670	+	NM_006800 AK025642	-320807	+	NM_001193270 AK300814	-321837	+	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	-322211	+	AB002314 NM_014728 AK289694	58036	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	710943	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	711014	+	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2	0.322573	CTCF.p2:-1:0.323
chr1	202124118	202124242	reg1019852.p1	5.669	+	TSC_hg19_v1_chr1_-_202113866 NM_138795	-10320	-	CU677299 AB118752 TSC_hg19_v1_chr1_-_202113832 BC015408 AK127138 AK313122	-10406	-	AK295576 AK313044 TSC_hg19_v1_chr1_+_202092044 BC050334 NM_004767 AK222639 Y16280	-32163	+	BC001746 NM_080588	4938	-	M64322 TSC_hg19_v1_chr1_-_202129719 AK225920 D11327	5534	-	TSC_hg19_v1_chr1_-_202129731 AK301051 AK301757 AK311661 AK293186 AK301980	5564	-	NM_138795|ARL8A|127829|ADP-ribosylation factor-like 8A##AB118752|ARL8A|127829|ADP-ribosylation factor-like 8A##BC015408|ARL8A|127829|ADP-ribosylation factor-like 8A##AK127138|ARL8A|127829|ADP-ribosylation factor-like 8A##AK313122|ARL8A|127829|ADP-ribosylation factor-like 8A##AK295576|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK313044|GPR37L1|9283|G protein-coupled receptor 37 like 1##BC050334|GPR37L1|9283|G protein-coupled receptor 37 like 1##NM_004767|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK222639|GPR37L1|9283|G protein-coupled receptor 37 like 1##Y16280|GPR37L1|9283|G protein-coupled receptor 37 like 1##BC001746|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_080588|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##M64322|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK225920|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##D11327|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301051|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301757|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK311661|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK293186|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301980|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7	0.028725	
chr17	20405341	20405448	reg1023212.p1	5.669	+	BC105943 AK290263 NM_001042685 AK296659	-34559	-	TSC_hg19_v1_chr17_+_20224469 BC036241	-180928	+	BC033618 TSC_hg19_v1_chr17_+_20108434 AK298601	-296960	+	NM_001190790	77642	+	AK057473 TSC_hg19_v1_chr17_+_20771859 BC041488 EF565107	366411	+	CU686685 BC068597 NM_001004306	393998	-	BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK290263|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001042685|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##BC036241|CCDC144C|348254|coiled-coil domain containing 144C##BC033618|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK298601|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2##BC068597|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001004306|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like	0.0	
chr17	8859861	8860023	reg1024127.p1	5.669	+	AY725853 AF128881 NM_014308	-44126	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-88958	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-157390	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	9039	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	65025	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	619189	-	AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8	0.0	
chr2	87877027	87877165	reg1030628.p1	5.669	+	TSC_hg19_v1_chr2_+_87755060 AK312010	-122036	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	-122079	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	-573764	-	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	170523	+	AK302429 NM_001078170	248189	-	CR749330 NM_001024457	408212	-	AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1##AK302429|RGPD2|729857|RANBP2-like and GRIP domain containing 2##NM_001078170|RGPD2|729857|RANBP2-like and GRIP domain containing 2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1	0.0	
chr8	92355913	92356015	reg1024890.p1	5.669	+	AJ413229 NM_052832 NM_134266 AF331521 AJ413228 AJ413230	-94434	+	AK097393 NM_001129890 AK130865	-241105	+	NM_016023 TSC_hg19_v1_chr8_+_92082548 BX647772 AK293843 BC029760 AK310823 AK291646 AF151836	-273450	+	D14289 NM_175636	673921	-	TSC_hg19_v1_chr8_-_93074863 S82690	718935	-	D43638 NM_004349	719226	-	AJ413229|SLC26A7|115111|solute carrier family 26, member 7##NM_052832|SLC26A7|115111|solute carrier family 26, member 7##NM_134266|SLC26A7|115111|solute carrier family 26, member 7##AF331521|SLC26A7|115111|solute carrier family 26, member 7##AJ413228|SLC26A7|115111|solute carrier family 26, member 7##AJ413230|SLC26A7|115111|solute carrier family 26, member 7##AK097393|LRRC69|100130742|leucine rich repeat containing 69##NM_001129890|LRRC69|100130742|leucine rich repeat containing 69##AK130865|LRRC69|100130742|leucine rich repeat containing 69##NM_016023|OTUD6B|51633|OTU domain containing 6B##BX647772|OTUD6B|51633|OTU domain containing 6B##AK293843|OTUD6B|51633|OTU domain containing 6B##BC029760|OTUD6B|51633|OTU domain containing 6B##AK310823|OTUD6B|51633|OTU domain containing 6B##AK291646|OTUD6B|51633|OTU domain containing 6B##AF151836|OTUD6B|51633|OTU domain containing 6B##D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	0.61979	CTCF.p2:-2:0.620
chr15	63458589	63458710	reg1025926.p2	5.668	+	BC031307 TSC_hg19_v1_chr15_-_63449677 AF070668 BC003667 BC047648 AK024591 NM_015920	-9040	-	TSC_hg19_v1_chr15_+_63414037 AY358709 BC037198	-44596	+	NM_032857 NM_171846 BC067288 TSC_hg19_v1_chr15_+_63414026 AK027808	-44633	+	TSC_hg19_v1_chr15_+_63481724 NM_016530 AB038995	23080	+	TSC_hg19_v1_chr15_+_63481804 AK001111 AK095444 AK297598 AL833365 BC020654 AB464123 CU676608	23156	+	NM_001145646 NM_031301 TSC_hg19_v1_chr15_+_63569803 AK291204 AL136671 BC020905 AB189172 AB197122 AF508794 AX776001 AY358698 AB528062 AM392724 AM392878 DQ891401 CU676772 AK307725	111164	+	BC031307|RPS27L|51065|ribosomal protein S27-like##AF070668|RPS27L|51065|ribosomal protein S27-like##BC003667|RPS27L|51065|ribosomal protein S27-like##BC047648|RPS27L|51065|ribosomal protein S27-like##AK024591|RPS27L|51065|ribosomal protein S27-like##NM_015920|RPS27L|51065|ribosomal protein S27-like##AY358709|LACTB|114294|lactamase, beta##BC037198|LACTB|114294|lactamase, beta##NM_032857|LACTB|114294|lactamase, beta##NM_171846|LACTB|114294|lactamase, beta##BC067288|LACTB|114294|lactamase, beta##AK027808|LACTB|114294|lactamase, beta##NM_016530|RAB8B|51762|RAB8B, member RAS oncogene family##AB038995|RAB8B|51762|RAB8B, member RAS oncogene family##AK001111|RAB8B|51762|RAB8B, member RAS oncogene family##AK095444|RAB8B|51762|RAB8B, member RAS oncogene family##AK297598|RAB8B|51762|RAB8B, member RAS oncogene family##AL833365|RAB8B|51762|RAB8B, member RAS oncogene family##BC020654|RAB8B|51762|RAB8B, member RAS oncogene family##NM_001145646|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##NM_031301|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK291204|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AL136671|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##BC020905|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB189172|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB197122|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AF508794|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AY358698|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392724|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392878|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##DQ891401|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK307725|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)	0.528438	CTCF.p2:-22:0.528
chr2	19512863	19512984	reg1024316.p2	5.668	+	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	-742113	-	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	-771007	-	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	-1452969	+	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	45456	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	555712	+	TSC_hg19_v1_chr2_-_20101456 BC050088	588505	-	AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946	0.01032	
chrX	1656391	1656516	reg1025807.p1	5.668	+	BC043610 GQ280263 NM_178129 AK126147	-415	-	AK301844 NM_001173473	-83802	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-84652	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	54076	+	NM_004043 U11090	57894	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	77550	+	BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr1	157740382	157740532	reg1021212.p1	5.667	+	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	-69930	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	-172656	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	-218227	-	CU686705 AK301113 AY043465 AF459633 AY358130 AK303549 BC069185 NM_030764	6435	-	CU689698 AF329488 BC021274 AK315748 AK096690 BC033690 AF459634 AY043464 NM_001159397 NM_001159398 NM_052938	49428	-	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	71105	-	DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AK301113|FCRL2|79368|Fc receptor-like 2##AY043465|FCRL2|79368|Fc receptor-like 2##AF459633|FCRL2|79368|Fc receptor-like 2##AY358130|FCRL2|79368|Fc receptor-like 2##AK303549|FCRL2|79368|Fc receptor-like 2##BC069185|FCRL2|79368|Fc receptor-like 2##NM_030764|FCRL2|79368|Fc receptor-like 2##AF329488|FCRL1|115350|Fc receptor-like 1##BC021274|FCRL1|115350|Fc receptor-like 1##AK315748|FCRL1|115350|Fc receptor-like 1##AK096690|FCRL1|115350|Fc receptor-like 1##BC033690|FCRL1|115350|Fc receptor-like 1##AF459634|FCRL1|115350|Fc receptor-like 1##AY043464|FCRL1|115350|Fc receptor-like 1##NM_001159397|FCRL1|115350|Fc receptor-like 1##NM_001159398|FCRL1|115350|Fc receptor-like 1##NM_052938|FCRL1|115350|Fc receptor-like 1##DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like	0.915977	CTCF.p2:-25:0.916
chr12	78511985	78512090	reg1025005.p1	5.667	+	NM_014903 AJ488201	-286905	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-1052748	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-1239254	-	AK094616 NM_001135805	745735	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	746438	+	TSC_hg19_v1_chr12_+_79258517 BX647240	746499	+	NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I##BX647240|SYT1|6857|synaptotagmin I	0.0	
chr14	70198128	70198229	reg1022896.p2	5.667	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	-119787	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	-119868	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	-246698	+	TSC_hg19_v1_chr14_+_70233809 BX640605	35628	+	BC095420 TSC_hg19_v1_chr14_+_70233810	35632	+	TSC_hg19_v1_chr14_+_70233856 AK311805 NM_001039465 NM_006925	35656	+	D87434|KIAA0247|9766|KIAA0247##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BX640605|SRSF5|6430|serine/arginine-rich splicing factor 5##BC095420|SRSF5|6430|serine/arginine-rich splicing factor 5##AK311805|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_001039465|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_006925|SRSF5|6430|serine/arginine-rich splicing factor 5	0.488364	CTCF.p2:-12:0.488
chr15	31508581	31508736	reg1003605.p3	5.667	+	GQ502181 HM135791 NM_001252020	-55230	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-114741	-	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	-224891	-	NM_001243538	14391	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	110680	+	AJ430383 NM_130901	438883	-	GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10##NM_001243538|LOC283710|283710|uncharacterized LOC283710##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A	0.0	
chr16	11480896	11481038	reg1027699.p1	5.667	+	TSC_hg19_v1_chr16_+_11439315 BC013040	-41649	+	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	-41673	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-105825	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	199220	-	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	199822	-	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	281331	+	BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin	0.027984	
chr2	1773621	1773741	reg1024663.p2	5.667	+	TSC_hg19_v1_chr2_-_1748320 BC030834	-25359	-	TSC_hg19_v1_chr2_-_1748288 NM_012293	-25388	-	TSC_hg19_v1_chr2_-_1748282 AF200348 D86983 EF090903	-25420	-	AL133024 TSC_hg19_v1_chr2_-_1926602	152870	-	BC031690 TSC_hg19_v1_chr2_-_1946938	173225	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	561284	-	BC030834|PXDN|7837|peroxidasin homolog (Drosophila)##NM_012293|PXDN|7837|peroxidasin homolog (Drosophila)##AF200348|PXDN|7837|peroxidasin homolog (Drosophila)##D86983|PXDN|7837|peroxidasin homolog (Drosophila)##EF090903|PXDN|7837|peroxidasin homolog (Drosophila)##AL133024|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like	0.999873	CTCF.p2:17:1.000
chr2	43451378	43451497	reg1024590.p1	5.667	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-431686	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-460137	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-655540	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	1908	-	TSC_hg19_v1_chr2_-_43453736 BC020369	2293	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	2305	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.0	
chrX	114461621	114461746	reg1025199.p2	5.667	+	NM_001145346 AK301904	-37708	+	X95302 AK308523 GQ494004 U70981 AK291957 NM_000640 Y08768 AK309444	-209509	-	NM_000868 U49516 BC028688 AK295753 TSC_hg19_v1_chrX_+_113818558 M81778	-643111	+	AB587552 TSC_hg19_v1_chrX_-_114468623 BC125223 BC125224 BX647193 NM_001243963 NM_020871	6936	-	NM_016383 AK093369 AX748081 AK314765 AF124430 BC128134 BC128135	62622	+	NM_005032	333493	+	NM_001145346|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##AK301904|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2##GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2##U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2##Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_001243963|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_016383|LUZP4|51213|leucine zipper protein 4##AK093369|LUZP4|51213|leucine zipper protein 4##AK314765|LUZP4|51213|leucine zipper protein 4##AF124430|LUZP4|51213|leucine zipper protein 4##BC128134|LUZP4|51213|leucine zipper protein 4##BC128135|LUZP4|51213|leucine zipper protein 4##NM_005032|PLS3|5358|plastin 3	0.908229	CTCF.p2:-23:0.908
chr19	42596683	42596804	reg1024860.p2	5.666	+	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	-16377	+	TSC_hg19_v1_chr19_+_42580286 NM_022752	-16461	+	S40369 AJ249209 BC131717 NM_002088	-26805	-	M36718 X13809 BT007438 AB590941 TSC_hg19_v1_chr19_-_42636564 BC006101 M36653 NM_001207025 NM_001207026 NM_001247994 NM_002698 X53468	39848	-	TSC_hg19_v1_chr19_-_42721830 BC027930 NM_133328 AY125488 BC013372 AK307895 AK130203 AK075328	125096	-	TSC_hg19_v1_chr19_+_42724463 AK298895 AB075831 NM_133444	127721	+	AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574##NM_022752|ZNF574|64763|zinc finger protein 574##S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##M36718|POU2F2|5452|POU class 2 homeobox 2##X13809|POU2F2|5452|POU class 2 homeobox 2##BT007438|POU2F2|5452|POU class 2 homeobox 2##BC006101|POU2F2|5452|POU class 2 homeobox 2##M36653|POU2F2|5452|POU class 2 homeobox 2##NM_001207025|POU2F2|5452|POU class 2 homeobox 2##NM_001207026|POU2F2|5452|POU class 2 homeobox 2##NM_001247994|POU2F2|5452|POU class 2 homeobox 2##NM_002698|POU2F2|5452|POU class 2 homeobox 2##X53468|POU2F2|5452|POU class 2 homeobox 2##BC027930|DEDD2|162989|death effector domain containing 2##NM_133328|DEDD2|162989|death effector domain containing 2##AY125488|DEDD2|162989|death effector domain containing 2##BC013372|DEDD2|162989|death effector domain containing 2##AK307895|DEDD2|162989|death effector domain containing 2##AK130203|DEDD2|162989|death effector domain containing 2##AK075328|DEDD2|162989|death effector domain containing 2##AK298895|ZNF526|116115|zinc finger protein 526##AB075831|ZNF526|116115|zinc finger protein 526##NM_133444|ZNF526|116115|zinc finger protein 526	0.291537	CTCF.p2:-6:0.292
chr2	8944206	8944358	reg1024416.p1	5.666	+	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-122079	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1886695	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1926419	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	33437	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	199539	-	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	402610	+	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	0.0	
chr4	47706871	47706986	reg1023828.p2	5.666	+	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	-219598	+	TSC_hg19_v1_chr4_-_47465720 BC008371	-241200	-	TSC_hg19_v1_chr4_-_47465683 AY542163 BC015145 NM_017845 AK000509 BC019826 AF182421	-241249	-	TSC_hg19_v1_chr4_+_47708352 D28417	1426	+	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	133162	-	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	209667	-	BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D##BC008371|COMMD8|54951|COMM domain containing 8##AY542163|COMMD8|54951|COMM domain containing 8##BC015145|COMMD8|54951|COMM domain containing 8##NM_017845|COMMD8|54951|COMM domain containing 8##AK000509|COMMD8|54951|COMM domain containing 8##BC019826|COMMD8|54951|COMM domain containing 8##AF182421|COMMD8|54951|COMM domain containing 8##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1	0.0	
chr9	116117606	116117741	reg1026362.p2	5.666	+	NM_017688 AK092607 AJ276691 AB527588	-5840	+	AK074891 AL833635 BC022982 AK093240 AX748007 BC012352 TSC_hg19_v1_chr9_-_116102556 AK313843 NM_001012361 NM_145241	-15097	-	BC013036 NM_145051	-56354	-	BC031878 NM_031219	20667	-	TSC_hg19_v1_chr9_-_116139236 AK315401	21573	-	AK295945 TSC_hg19_v1_chr9_-_116163528	45790	-	NM_017688|BSPRY|54836|B-box and SPRY domain containing##AK092607|BSPRY|54836|B-box and SPRY domain containing##AJ276691|BSPRY|54836|B-box and SPRY domain containing##AK074891|WDR31|114987|WD repeat domain 31##AL833635|WDR31|114987|WD repeat domain 31##BC022982|WDR31|114987|WD repeat domain 31##AK093240|WDR31|114987|WD repeat domain 31##BC012352|WDR31|114987|WD repeat domain 31##AK313843|WDR31|114987|WD repeat domain 31##NM_001012361|WDR31|114987|WD repeat domain 31##NM_145241|WDR31|114987|WD repeat domain 31##BC013036|RNF183|138065|ring finger protein 183##NM_145051|RNF183|138065|ring finger protein 183##BC031878|HDHD3|81932|haloacid dehalogenase-like hydrolase domain containing 3##NM_031219|HDHD3|81932|haloacid dehalogenase-like hydrolase domain containing 3##AK315401|HDHD3|81932|haloacid dehalogenase-like hydrolase domain containing 3##AK295945|ALAD|210|aminolevulinate dehydratase	0.0	
chr17	41656217	41656366	reg1023002.p1	5.665	+	TSC_hg19_v1_chr17_-_41623674 AK315961 U18018 NM_001079675	-32565	-	BC016623 AK290429 AK299019 AK312934 NM_001986	-33016	-	D12765 TSC_hg19_v1_chr17_-_41622738 DQ396626	-33551	-	AB527749 CU686836 EU446636 BC069474 BC069506 NM_004527 NM_013999 U10492 U10493	82624	-	NM_001040002 AK291139	82984	-	BC101086 BC101087 BC101088 BC101089 AF331844 AF326739 NM_025237	179852	-	AK315961|ETV4|2118|ets variant 4##U18018|ETV4|2118|ets variant 4##NM_001079675|ETV4|2118|ets variant 4##BC016623|ETV4|2118|ets variant 4##AK290429|ETV4|2118|ets variant 4##AK299019|ETV4|2118|ets variant 4##AK312934|ETV4|2118|ets variant 4##NM_001986|ETV4|2118|ets variant 4##D12765|ETV4|2118|ets variant 4##DQ396626|ETV4|2118|ets variant 4##EU446636|MEOX1|4222|mesenchyme homeobox 1##BC069474|MEOX1|4222|mesenchyme homeobox 1##BC069506|MEOX1|4222|mesenchyme homeobox 1##NM_004527|MEOX1|4222|mesenchyme homeobox 1##NM_013999|MEOX1|4222|mesenchyme homeobox 1##U10492|MEOX1|4222|mesenchyme homeobox 1##U10493|MEOX1|4222|mesenchyme homeobox 1##NM_001040002|MEOX1|4222|mesenchyme homeobox 1##AK291139|MEOX1|4222|mesenchyme homeobox 1##BC101086|SOST|50964|sclerostin##BC101087|SOST|50964|sclerostin##BC101088|SOST|50964|sclerostin##BC101089|SOST|50964|sclerostin##AF331844|SOST|50964|sclerostin##AF326739|SOST|50964|sclerostin##NM_025237|SOST|50964|sclerostin	0.33838	CTCF.p2:88:0.283
chr1	94279462	94279643	reg1000149.p1	5.665	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	-132225	-	TSC_hg19_v1_chr1_+_94057602 BC084562	-221945	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-222012	+	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	65162	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	65196	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	95410	-	U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit	0.0	
chr22	42956982	42957094	reg1026242.p1	5.665	+	BC041802 AK294584 AL450314 NM_014509 AK295223 BC119650 BC119651 BC127635 BC127636 CR456455 AL589866 AL590118 AL590120 CU013005 CU013293	-7092	+	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	-41224	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	-41271	-	AL157851 TSC_hg19_v1_chr22_-_42978018 BC014647 BC007736 BC053540 AK098201 BC143340	21014	-	TSC_hg19_v1_chr22_-_43010884 BC001488 AB385492 AY506562 CU013006 CU013294 CU676456 AK291774 AK303419 AB055760 BC056912 AL137743 BC049840 AL160111 AL160112 AK291623	53825	-	CR456456 TSC_hg19_v1_chr22_-_43010893	53854	-	AK294584|SERHL2|253190|serine hydrolase-like 2##AL450314|SERHL2|253190|serine hydrolase-like 2##NM_014509|SERHL2|253190|serine hydrolase-like 2##AK295223|SERHL2|253190|serine hydrolase-like 2##BC119650|SERHL2|253190|serine hydrolase-like 2##BC119651|SERHL2|253190|serine hydrolase-like 2##BC127635|SERHL2|253190|serine hydrolase-like 2##BC127636|SERHL2|253190|serine hydrolase-like 2##CR456455|SERHL2|253190|serine hydrolase-like 2##AL589866|SERHL2|253190|serine hydrolase-like 2##AL590118|SERHL2|253190|serine hydrolase-like 2##AL590120|SERHL2|253190|serine hydrolase-like 2##CU013005|SERHL2|253190|serine hydrolase-like 2##CU013293|SERHL2|253190|serine hydrolase-like 2##BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AL157851|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC014647|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC007736|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC053540|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##AK098201|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC143340|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC001488|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AY506562|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CU013006|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CU013294|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK291774|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK303419|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AB055760|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##BC056912|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL137743|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##BC049840|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL160111|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL160112|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK291623|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CR456456|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3	0.958263	CTCF.p2:8:0.958
chr2	46717818	46717923	reg1023000.p1	5.664	+	NM_001145051	-11167	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	-192895	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	-193279	+	BC034808 NM_080653	29225	-	TSC_hg19_v1_chr2_+_46769874 NM_012249 AK095329	51979	+	TSC_hg19_v1_chr2_+_46769905 BC056154 BC070485 BC065291 BC093805 BC101806 AF498976 M31470 AB528045	52168	+	NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##BC034808|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_080653|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_012249|RHOQ|23433|ras homolog gene family, member Q##AK095329|RHOQ|23433|ras homolog gene family, member Q##BC056154|RHOQ|23433|ras homolog gene family, member Q##BC070485|RHOQ|23433|ras homolog gene family, member Q##BC065291|RHOQ|23433|ras homolog gene family, member Q##BC093805|RHOQ|23433|ras homolog gene family, member Q##BC101806|RHOQ|23433|ras homolog gene family, member Q##AF498976|RHOQ|23433|ras homolog gene family, member Q##M31470|RHOQ|23433|ras homolog gene family, member Q	0.0	
chr22	20162531	20162635	reg1027389.p1	5.663	+	NM_001243537	-25153	-	TSC_hg19_v1_chr22_+_20119357 AY894890 BC053544 NM_001185024 NM_013373 AK131238	-43150	+	TSC_hg19_v1_chr22_+_20105145 AB587487 CU013156 CU013444	-57426	+	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	93184	-	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	144986	-	NM_001242313	215085	+	NM_001243537|LOC388849|388849|uncharacterized LOC388849##AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8##BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8##AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8##CU013156|RANBP1|5902|RAN binding protein 1##CU013444|RANBP1|5902|RAN binding protein 1##AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_001242313|TMEM191B|728229|transmembrane protein 191B	0.22486	CTCF.p2:26:0.225
chr2	241780014	241780128	reg1024964.p1	5.663	+	BC064906 TSC_hg19_v1_chr2_-_241759637 AK307119 AB621817 AB210029 AB290172 NM_001244008 NM_004321	-20396	-	AB040748 BC041460 NM_198998	-148810	+	BC157895 BC171912 BC139748 NM_001102467 BC041460	-157756	-	NM_000030 X53414 BC132819 D13368 S71388 AK315331 TSC_hg19_v1_chr2_+_241808251 AK292754 AK298420 AB292648 X56092 AF348451 AK298400 AK316495	28197	+	BC125154 BC125155 AK026324 NM_024861 AK096434	51348	-	AK056601 NM_001085437	55501	-	BC064906|KIF1A|547|kinesin family member 1A##AK307119|KIF1A|547|kinesin family member 1A##AB210029|KIF1A|547|kinesin family member 1A##AB290172|KIF1A|547|kinesin family member 1A##NM_001244008|KIF1A|547|kinesin family member 1A##NM_004321|KIF1A|547|kinesin family member 1A##AB040748|AQP12A|375318|aquaporin 12A##BC041460|AQP12B|653437|aquaporin 12B##NM_198998|AQP12A|375318|aquaporin 12A##BC157895|AQP12B|653437|aquaporin 12B##BC171912|AQP12B|653437|aquaporin 12B##BC139748|AQP12B|653437|aquaporin 12B##NM_001102467|AQP12B|653437|aquaporin 12B##BC041460|AQP12B|653437|aquaporin 12B##NM_000030|AGXT|189|alanine-glyoxylate aminotransferase##X53414|AGXT|189|alanine-glyoxylate aminotransferase##BC132819|AGXT|189|alanine-glyoxylate aminotransferase##D13368|AGXT|189|alanine-glyoxylate aminotransferase##AK315331|AGXT|189|alanine-glyoxylate aminotransferase##AK292754|AGXT|189|alanine-glyoxylate aminotransferase##AK298420|AGXT|189|alanine-glyoxylate aminotransferase##AB292648|AGXT|189|alanine-glyoxylate aminotransferase##X56092|AGXT|189|alanine-glyoxylate aminotransferase##AF348451|AGXT|189|alanine-glyoxylate aminotransferase##AK298400|AGXT|189|alanine-glyoxylate aminotransferase##AK316495|AGXT|189|alanine-glyoxylate aminotransferase##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54##AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54	1.016521	CTCF.p2:18:0.999
chr3	81539765	81539901	reg1024708.p1	5.663	+	NM_002941	-1722775	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-2471246	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-2872848	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	270864	-	TSC_hg19_v1_chr3_-_81810798 AK312245	270965	-	TSC_hg19_v1_chr3_-_81810802 AK297939	270972	-	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	1.100858	CTCF.p2:-15:0.999
chr5	134793272	134793417	reg1030395.p1	5.663	+	AK131088 AB161513 NM_001099221	-5307	-	CU686932 BC074831 BC074832 BC069608 BC069610 BC117156 BC117158 AB074498 NM_130848	-10427	-	TSC_hg19_v1_chr5_-_134735578 BC013331 AF054174 NM_004893	-57771	-	BC008687 BC028226 NM_006161 TSC_hg19_v1_chr5_-_134871655 AB593107 AK314280	78302	-	AF086340 AF073957 AF144103 BT007080 AB528117 AM392840 AF106911 BC003513 AY358906 TSC_hg19_v1_chr5_-_134914682 AB543622 AK075514	121229	-	NM_004887	121624	-	AB161513|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##NM_001099221|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##BC074831|C5orf20|140947|chromosome 5 open reading frame 20##BC074832|C5orf20|140947|chromosome 5 open reading frame 20##BC069608|C5orf20|140947|chromosome 5 open reading frame 20##BC069610|C5orf20|140947|chromosome 5 open reading frame 20##BC117156|C5orf20|140947|chromosome 5 open reading frame 20##BC117158|C5orf20|140947|chromosome 5 open reading frame 20##AB074498|C5orf20|140947|chromosome 5 open reading frame 20##NM_130848|C5orf20|140947|chromosome 5 open reading frame 20##BC013331|H2AFY|9555|H2A histone family, member Y##AF054174|H2AFY|9555|H2A histone family, member Y##NM_004893|H2AFY|9555|H2A histone family, member Y##BC008687|NEUROG1|4762|neurogenin 1##BC028226|NEUROG1|4762|neurogenin 1##NM_006161|NEUROG1|4762|neurogenin 1##AB593107|NEUROG1|4762|neurogenin 1##AF086340|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF073957|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF144103|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BT007080|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AM392840|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF106911|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BC003513|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AY358906|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AB543622|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AK075514|CXCL14|9547|chemokine (C-X-C motif) ligand 14##NM_004887|CXCL14|9547|chemokine (C-X-C motif) ligand 14	0.999959	CTCF.p2:1:1.000
chr6	31797821	31797954	reg1024254.p2	5.663	+	TSC_hg19_v1_chr6_+_31795518 NM_005346 AK295398 AK303967 BC001876 BC063507 BC057397 BC018740 BC009322 CU679297 DQ896426 EU176434	-2327	+	CU679297 AB527245 DQ896426 EU176434 TSC_hg19_v1_chr6_+_31783660	-14289	+	TSC_hg19_v1_chr6_+_31783319 DQ409329 AK096017 AK225692 AK225699 AK291295 AK294182 AK295398 AK298056 AK298078 AK298098 AK301574 AK303980 AK304618 AK304652 AK301243 AB209818 BC002453	-14552	+	BC017660 TSC_hg19_v1_chr6_+_31802692 AK311989 BC066330 NM_001040437 NM_001040438 AJ249731 AJ249732 BC000706 BT007334	4797	+	TSC_hg19_v1_chr6_-_31830590 BT007206 CR456717 CR541916 CU674360 DQ890716 DQ892186 DQ893896 DQ895380 AB209011 BC011900 U84246	32684	-	TSC_hg19_v1_chr6_-_31830595 AK313006 AK290966 X78687 BC000722 AF040958 NM_000434	32763	-	NM_005346|HSPA1B|3304|heat shock 70kDa protein 1B##AK295398|HSPA1B|3304|heat shock 70kDa protein 1B##AK303967|HSPA1B|3304|heat shock 70kDa protein 1B##BC001876|HSPA1B|3304|heat shock 70kDa protein 1B##BC063507|HSPA1B|3304|heat shock 70kDa protein 1B##BC057397|HSPA1B|3304|heat shock 70kDa protein 1B##BC018740|HSPA1A|3303|heat shock 70kDa protein 1A##BC009322|HSPA1A|3303|heat shock 70kDa protein 1A##DQ896426|HSPA1B|3304|heat shock 70kDa protein 1B##EU176434|HSPA1A|3303|heat shock 70kDa protein 1A##DQ896426|HSPA1B|3304|heat shock 70kDa protein 1B##EU176434|HSPA1A|3303|heat shock 70kDa protein 1A##AK096017|HSPA1A|3303|heat shock 70kDa protein 1A##AK225692|HSPA1A|3303|heat shock 70kDa protein 1A##AK225699|HSPA1A|3303|heat shock 70kDa protein 1A##AK291295|HSPA1A|3303|heat shock 70kDa protein 1A##AK294182|HSPA1A|3303|heat shock 70kDa protein 1A##AK295398|HSPA1B|3304|heat shock 70kDa protein 1B##AK298056|HSPA1A|3303|heat shock 70kDa protein 1A##AK301574|HSPA1A|3303|heat shock 70kDa protein 1A##AK303980|HSPA1A|3303|heat shock 70kDa protein 1A##AK304618|HSPA1A|3303|heat shock 70kDa protein 1A##AK304652|HSPA1A|3303|heat shock 70kDa protein 1A##AK301243|HSPA1A|3303|heat shock 70kDa protein 1A##AB209818|HSPA1A|3303|heat shock 70kDa protein 1A##BC002453|HSPA1A|3303|heat shock 70kDa protein 1A##BC017660|C6orf48|50854|chromosome 6 open reading frame 48##AK311989|C6orf48|50854|chromosome 6 open reading frame 48##BC066330|C6orf48|50854|chromosome 6 open reading frame 48##NM_001040437|C6orf48|50854|chromosome 6 open reading frame 48##NM_001040438|C6orf48|50854|chromosome 6 open reading frame 48##AJ249731|C6orf48|50854|chromosome 6 open reading frame 48##AJ249732|C6orf48|50854|chromosome 6 open reading frame 48##BC000706|C6orf48|50854|chromosome 6 open reading frame 48##BT007334|C6orf48|50854|chromosome 6 open reading frame 48##BT007206|NEU1|4758|sialidase 1 (lysosomal sialidase)##CR456717|NEU1|4758|sialidase 1 (lysosomal sialidase)##CR541916|NEU1|4758|sialidase 1 (lysosomal sialidase)##DQ890716|NEU1|4758|sialidase 1 (lysosomal sialidase)##DQ892186|NEU1|4758|sialidase 1 (lysosomal sialidase)##DQ893896|NEU1|4758|sialidase 1 (lysosomal sialidase)##DQ895380|NEU1|4758|sialidase 1 (lysosomal sialidase)##AB209011|NEU1|4758|sialidase 1 (lysosomal sialidase)##BC011900|NEU1|4758|sialidase 1 (lysosomal sialidase)##U84246|NEU1|4758|sialidase 1 (lysosomal sialidase)##AK313006|NEU1|4758|sialidase 1 (lysosomal sialidase)##AK290966|NEU1|4758|sialidase 1 (lysosomal sialidase)##X78687|NEU1|4758|sialidase 1 (lysosomal sialidase)##BC000722|NEU1|4758|sialidase 1 (lysosomal sialidase)##AF040958|NEU1|4758|sialidase 1 (lysosomal sialidase)##NM_000434|NEU1|4758|sialidase 1 (lysosomal sialidase)	0.953188	CTCF.p2:17:0.953
chr8	129665694	129665832	reg1026441.p1	5.663	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-858980	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-917273	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-917438	+	AB042405 NM_031415	1133370	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1286152	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1286243	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.308418	CTCF.p2:30:0.308
chr17	31003613	31003737	reg1025178.p2	5.662	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-188915	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-189078	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-189604	+	CU688936 AB385376 AB018270 BC146763 NM_015194	200220	-	TSC_hg19_v1_chr17_-_31204141 AK127942	200448	-	TSC_hg19_v1_chr17_-_31204196 BC030602	200538	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.976727	CTCF.p2:-3:0.977
chr22	21904718	21904884	reg1024362.p1	5.662	+	NM_001207052	-83343	+	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	-133125	+	NM_001128635	-166762	+	NM_001128635	571	-	NM_001128633	948	-	NM_003347 TSC_hg19_v1_chr22_+_21922000	17178	+	NM_001207052|TMEM191C|645426|transmembrane protein 191C##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_003347|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3	0.042788	
chr3	45957171	45957352	reg1018503.p1	5.662	+	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	-29206	+	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	-73666	-	TSC_hg19_v1_chr3_-_45838112 AF125107	-119113	-	NM_006564 Y13248	27711	+	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	80060	-	AB189434 AB189435 NM_001024644 NM_005283	111717	-	NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1	0.0	
chr10	105805376	105805472	reg1021029.p1	5.661	+	AF273048 NM_014720 BC111565 BC008697	-77937	+	TSC_hg19_v1_chr10_+_105726941 BC047885 BC064804 BC047762 BC036736 D86959	-78460	+	TSC_hg19_v1_chr10_+_105726926 AK307389	-78538	+	AK300117 TSC_hg19_v1_chr10_-_105845560 M91669 AK300226 AK309940	40145	-	BC004478 D63465 TSC_hg19_v1_chr10_-_105845639 NM_000494	40205	-	NM_145247 BC140835 NM_001002759 BC043256 AK291184	76485	+	AF273048|SLK|9748|STE20-like kinase##NM_014720|SLK|9748|STE20-like kinase##BC111565|SLK|9748|STE20-like kinase##BC008697|SLK|9748|STE20-like kinase##BC047885|SLK|9748|STE20-like kinase##BC064804|SLK|9748|STE20-like kinase##BC047762|SLK|9748|STE20-like kinase##BC036736|SLK|9748|STE20-like kinase##D86959|SLK|9748|STE20-like kinase##AK307389|SLK|9748|STE20-like kinase##M91669|COL17A1|1308|collagen, type XVII, alpha 1##AK309940|COL17A1|1308|collagen, type XVII, alpha 1##BC004478|COL17A1|1308|collagen, type XVII, alpha 1##D63465|COL17A1|1308|collagen, type XVII, alpha 1##NM_000494|COL17A1|1308|collagen, type XVII, alpha 1##NM_145247|SFR1|119392|SWI5-dependent recombination repair 1##BC140835|SFR1|119392|SWI5-dependent recombination repair 1##NM_001002759|SFR1|119392|SWI5-dependent recombination repair 1##BC043256|SFR1|119392|SWI5-dependent recombination repair 1##AK291184|SFR1|119392|SWI5-dependent recombination repair 1	0.624715	CTCF.p2:-21:0.625
chr6	132246146	132246262	reg1022561.p1	5.661	+	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-116943	+	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	-117043	+	NM_001145659	-214048	-	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	26210	-	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	476412	-	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	588046	-	BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_001145659|CTAGE9|643854|CTAGE family, member 9##BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7	0.058787	
chr6	16404151	16404276	reg1023198.p1	5.661	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-165362	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-260903	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-274776	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	357484	-	NM_001190766	698275	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	877641	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.025833	
chrX	49012680	49012836	reg1025652.p2	5.660	+	AB209806 CU674194 BC000397 BC003148 NM_015698 TSC_hg19_v1_chrX_-_48980086 AK310728 U66359	-32658	-	TSC_hg19_v1_chrX_-_48958083 BC069206 NM_007075	-54666	-	AK023344 TSC_hg19_v1_chrX_-_48937565 NM_001029896	-75186	-	BC067800 NM_001099681 NM_001099682 NM_024859 BC027995	6437	+	TSC_hg19_v1_chrX_+_49020239 AK025340 AK094251 NM_001099680	7496	+	NM_002668 TSC_hg19_v1_chrX_+_49028254 L09604 BC109066 AB591027	15505	+	AB209806|GPKOW|27238|G patch domain and KOW motifs##BC000397|GPKOW|27238|G patch domain and KOW motifs##BC003148|GPKOW|27238|G patch domain and KOW motifs##NM_015698|GPKOW|27238|G patch domain and KOW motifs##U66359|GPKOW|27238|G patch domain and KOW motifs##BC069206|WDR45|11152|WD repeat domain 45##NM_007075|WDR45|11152|WD repeat domain 45##AK023344|WDR45|11152|WD repeat domain 45##NM_001029896|WDR45|11152|WD repeat domain 45##BC067800|MAGIX|79917|MAGI family member, X-linked##NM_001099681|MAGIX|79917|MAGI family member, X-linked##NM_001099682|MAGIX|79917|MAGI family member, X-linked##NM_024859|MAGIX|79917|MAGI family member, X-linked##BC027995|MAGIX|79917|MAGI family member, X-linked##AK025340|MAGIX|79917|MAGI family member, X-linked##AK094251|MAGIX|79917|MAGI family member, X-linked##NM_001099680|MAGIX|79917|MAGI family member, X-linked##NM_002668|PLP2|5355|proteolipid protein 2 (colonic epithelium-enriched)##L09604|PLP2|5355|proteolipid protein 2 (colonic epithelium-enriched)##BC109066|PLP2|5355|proteolipid protein 2 (colonic epithelium-enriched)	0.04722	
chr12	108004186	108004304	reg1028195.p1	5.659	+	AK127295 NM_001017523	-29612	+	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	-292032	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-516635	-	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	75422	+	AK056378 TSC_hg19_v1_chr12_-_108154899	150594	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	150665	-	AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK056378|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4	0.182053	
chr16	17170282	17170437	reg1021900.p2	5.659	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-843829	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-843871	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-843877	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	394446	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1403032	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1627737	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.184862	
chr17	48194676	48194794	reg1025464.p2	5.659	+	TSC_hg19_v1_chr17_+_48172739 NM_001199900 NM_002611 AK297089 BC040478 BC063137 AK290522 AK293600 BC005811 L42451 NM_001199899	-21925	+	AK055119 NM_001199898	-22635	+	TSC_hg19_v1_chr17_+_48133357 AB209658 BC150190 BC015344	-61289	+	TSC_hg19_v1_chr17_-_48207145 BC142728 BC136485 AY148482 NM_174920 AK291482 AK094209 AK225767 BC141822	12414	-	AJ401189 NM_032595 TSC_hg19_v1_chr17_-_48227977	33191	-	AK300710 TSC_hg19_v1_chr17_+_48243372 L34355 L35853 L46810 NM_000023 NM_001135697 AK293614 AK290622 BC025702 U08895 AB464188 DQ893777 CU693018	48647	+	NM_001199900|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_002611|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK297089|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC040478|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC063137|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK290522|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK293600|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##BC005811|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##L42451|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199899|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AK055119|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199898|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##AB209658|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC150190|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC015344|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC142728|SAMD14|201191|sterile alpha motif domain containing 14##BC136485|SAMD14|201191|sterile alpha motif domain containing 14##AY148482|SAMD14|201191|sterile alpha motif domain containing 14##NM_174920|SAMD14|201191|sterile alpha motif domain containing 14##AK291482|SAMD14|201191|sterile alpha motif domain containing 14##AK094209|SAMD14|201191|sterile alpha motif domain containing 14##AK225767|SAMD14|201191|sterile alpha motif domain containing 14##BC141822|SAMD14|201191|sterile alpha motif domain containing 14##AJ401189|PPP1R9B|84687|protein phosphatase 1, regulatory subunit 9B##NM_032595|PPP1R9B|84687|protein phosphatase 1, regulatory subunit 9B##AK300710|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L34355|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L35853|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L46810|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##NM_000023|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##NM_001135697|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##AK290622|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##BC025702|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##U08895|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##DQ893777|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)	0.306327	CTCF.p2:8:0.306
chr19	13972657	13972838	reg1004708.p1	5.659	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	-25645	-	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-66502	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-87463	+	BC101209 BC101210 NM_001098622	15315	+	AK097431 NM_024323	44161	-	NM_017721 TSC_hg19_v1_chr19_+_14017006	44233	+	AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57##NM_017721|CC2D1A|54862|coiled-coil and C2 domain containing 1A	0.0	
chr20	62733486	62733576	reg1023821.p1	5.659	+	BC038433 NM_001200019	-17163	+	BC036837 NM_001007125	-17820	-	AF285093 AK308203 NM_000913 NM_182647 L40949 AF285095	-22052	+	BC067481 BC067482 BC067483 CU688304 CU688306 NM_005286	4652	-	TSC_hg19_v1_chr20_+_62795804 BC018917	62259	+	AB020642 NM_004535 TSC_hg19_v1_chr20_+_62795840	62302	+	BC038433|OPRL1|4987|opiate receptor-like 1##NM_001200019|OPRL1|4987|opiate receptor-like 1##BC036837|C20orf201|198437|chromosome 20 open reading frame 201##NM_001007125|C20orf201|198437|chromosome 20 open reading frame 201##AF285093|OPRL1|4987|opiate receptor-like 1##AK308203|OPRL1|4987|opiate receptor-like 1##NM_000913|OPRL1|4987|opiate receptor-like 1##NM_182647|OPRL1|4987|opiate receptor-like 1##L40949|OPRL1|4987|opiate receptor-like 1##AF285095|OPRL1|4987|opiate receptor-like 1##BC067481|NPBWR2|2832|neuropeptides B/W receptor 2##BC067482|NPBWR2|2832|neuropeptides B/W receptor 2##BC067483|NPBWR2|2832|neuropeptides B/W receptor 2##NM_005286|NPBWR2|2832|neuropeptides B/W receptor 2##BC018917|MYT1|4661|myelin transcription factor 1##AB020642|MYT1|4661|myelin transcription factor 1##NM_004535|MYT1|4661|myelin transcription factor 1	0.983072	CTCF.p2:8:0.983
chr20	9374069	9374205	reg1029574.p1	5.658	+	NM_000933 AB384821	-85684	+	NM_182797 BC117458 BC143868	-176079	+	AK307482 TSC_hg19_v1_chr20_+_9049806	-324339	+	TSC_hg19_v1_chr20_+_9458460 AK057634	84376	+	TSC_hg19_v1_chr20_+_9494997 AK295336 AK316114 NM_001199897 NM_012261	120862	+	AL121740 BC050727 TSC_hg19_v1_chr20_+_9495326	121175	+	NM_000933|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##AK057634|PLCB4|5332|phospholipase C, beta 4##AK295336|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AK316114|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_001199897|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_012261|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AL121740|LAMP5|24141|lysosomal-associated membrane protein family, member 5##BC050727|LAMP5|24141|lysosomal-associated membrane protein family, member 5	0.961757	CTCF.p2:-14:0.962
chr2	8685166	8685292	reg1023791.p2	5.658	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1627642	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1667366	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1678526	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	136974	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	292490	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	458592	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.827695	CTCF.p2:-11:0.828
chr8	119990122	119990241	reg1024624.p1	5.658	+	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	-25961	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	-355974	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	-356056	-	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	89288	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	230458	+	NM_002514 AK294289 AK312355 TSC_hg19_v1_chr8_+_120428685 AY082381 X96584 BC015028 CU677181 AB463923 DQ891179 DQ894361 CR457432	438480	+	AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_002514|NOV|4856|nephroblastoma overexpressed gene##AK294289|NOV|4856|nephroblastoma overexpressed gene##AK312355|NOV|4856|nephroblastoma overexpressed gene##AY082381|NOV|4856|nephroblastoma overexpressed gene##X96584|NOV|4856|nephroblastoma overexpressed gene##BC015028|NOV|4856|nephroblastoma overexpressed gene##DQ891179|NOV|4856|nephroblastoma overexpressed gene##DQ894361|NOV|4856|nephroblastoma overexpressed gene##CR457432|NOV|4856|nephroblastoma overexpressed gene	0.779308	CTCF.p2:-3:0.779
chr10	32236660	32236791	reg1027957.p1	5.657	+	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	-18940	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	-19001	-	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-626636	+	TSC_hg19_v1_chr10_-_32344938 AB462413	108207	-	BC126279 BC126281 TSC_hg19_v1_chr10_-_32345152 X65873	108443	-	TSC_hg19_v1_chr10_-_32345335 BC080604 BC010885 BC111042 AK289413 AK299542 BC065267 AK307502	108589	-	AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##BC126279|KIF5B|3799|kinesin family member 5B##BC126281|KIF5B|3799|kinesin family member 5B##X65873|KIF5B|3799|kinesin family member 5B##BC080604|KIF5B|3799|kinesin family member 5B##BC010885|KIF5B|3799|kinesin family member 5B##BC111042|KIF5B|3799|kinesin family member 5B##AK289413|KIF5B|3799|kinesin family member 5B##AK299542|KIF5B|3799|kinesin family member 5B##BC065267|KIF5B|3799|kinesin family member 5B##AK307502|KIF5B|3799|kinesin family member 5B	1.1242	CTCF.p2:10:0.999
chr11	57045424	57045534	reg1025335.p2	5.657	+	AK075252 BC032688 AK315542 AK074514 X89271 NM_005161	-40679	-	AK127591 NM_001005210 BC136737 BC136739 BC150572	-96180	+	BC137198 NM_001005323	-289112	+	AF441771 TSC_hg19_v1_chr11_-_57089790	44267	-	TSC_hg19_v1_chr11_-_57092425 AB051528 BC150333 NM_033396 AK124903	46896	-	AB209132 BC091486 TSC_hg19_v1_chr11_-_57103354 M86737 NM_003146	57870	-	AK075252|APLNR|187|apelin receptor##BC032688|APLNR|187|apelin receptor##AK315542|APLNR|187|apelin receptor##AK074514|APLNR|187|apelin receptor##X89271|APLNR|187|apelin receptor##NM_005161|APLNR|187|apelin receptor##AK127591|LRRC55|219527|leucine rich repeat containing 55##NM_001005210|LRRC55|219527|leucine rich repeat containing 55##BC136737|LRRC55|219527|leucine rich repeat containing 55##BC136739|LRRC55|219527|leucine rich repeat containing 55##BC150572|LRRC55|219527|leucine rich repeat containing 55##BC137198|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##NM_001005323|OR5AK2|390181|olfactory receptor, family 5, subfamily AK, member 2##AF441771|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AB051528|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##BC150333|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##NM_033396|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AK124903|TNKS1BP1|85456|tankyrase 1 binding protein 1, 182kDa##AB209132|SSRP1|6749|structure specific recognition protein 1##BC091486|SSRP1|6749|structure specific recognition protein 1##M86737|SSRP1|6749|structure specific recognition protein 1##NM_003146|SSRP1|6749|structure specific recognition protein 1	0.958984	CTCF.p2:6:0.959
chr12	125831154	125831252	reg1025167.p2	5.657	+	NM_052907	-20042	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-281135	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-281262	+	NM_001136103	2920744	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	3477240	-	BC043528 TSC_hg19_v1_chr12_+_129337985	3506781	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.520306	CTCF.p2:-7:0.358
chr1	22643906	22643988	reg1023344.p1	5.657	+	AY009398 BT020125 AB590593 AB061675 AY358947 AF316543 NM_030761 BC057781	-174436	-	TSC_hg19_v1_chr1_+_22379812 AL121737	-264142	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	-264777	+	AK091019 AK095273 AX746732 NM_001083621 NM_014870 TSC_hg19_v1_chr1_+_22778343	134397	+	TSC_hg19_v1_chr1_+_22778350 AB007947 BC114607	134479	+	TSC_hg19_v1_chr1_+_22889990 BC072417 NM_001006943 NM_020526 BC038796 AB527136	246109	+	AY009398|WNT4|54361|wingless-type MMTV integration site family, member 4##BT020125|WNT4|54361|wingless-type MMTV integration site family, member 4##AB061675|WNT4|54361|wingless-type MMTV integration site family, member 4##AY358947|WNT4|54361|wingless-type MMTV integration site family, member 4##AF316543|WNT4|54361|wingless-type MMTV integration site family, member 4##NM_030761|WNT4|54361|wingless-type MMTV integration site family, member 4##BC057781|WNT4|54361|wingless-type MMTV integration site family, member 4##AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40##AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40##AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40##BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40##BC072417|EPHA8|2046|EPH receptor A8##NM_001006943|EPHA8|2046|EPH receptor A8##NM_020526|EPHA8|2046|EPH receptor A8##BC038796|EPHA8|2046|EPH receptor A8	0.563336	CTCF.p2:8:0.563
chr13	77241830	77241966	reg1029374.p1	5.657	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-907058	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-1031428	+	AF330045 NM_005358	-1047329	+	BC013764 TSC_hg19_v1_chr13_-_77460431	218502	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	218709	-	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	324271	+	NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5	0.514058	CTCF.p2:-37:0.514
chr3	156167909	156168032	reg1025305.p2	5.657	+	NM_172159 BC043166 AK127240	-159160	+	NM_003471 AK292999 L39833 U16953 U17968	-307108	+	NM_172160 L47665 AK292693 AK303287	-329619	+	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	104911	-	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	104973	-	NM_015508	224234	+	NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_003471|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292999|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L39833|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U16953|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U17968|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_172160|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L47665|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292693|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK303287|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	0.126313	
chr1	1840512	1840597	reg1025363.p1	5.656	+	TSC_hg19_v1_chr1_-_1822565 AK122949	-17986	-	TSC_hg19_v1_chr1_-_1822527 NM_002074	-18033	-	AK312614 TSC_hg19_v1_chr1_-_1822502	-18052	-	AF490905 AY566229 NM_138705	5711	+	AB528804 GQ129259 GQ129260 TSC_hg19_v1_chr1_-_1850719 NM_178545	10167	-	AK127388 NM_001080484	94721	-	AK122949|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##NM_002074|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##AK312614|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##AF490905|CALML6|163688|calmodulin-like 6##AY566229|CALML6|163688|calmodulin-like 6##NM_138705|CALML6|163688|calmodulin-like 6##GQ129259|TMEM52|339456|transmembrane protein 52##GQ129260|TMEM52|339456|transmembrane protein 52##NM_178545|TMEM52|339456|transmembrane protein 52##AK127388|KIAA1751|85452|KIAA1751##NM_001080484|KIAA1751|85452|KIAA1751	0.825609	CTCF.p2:23:0.826
chr12	121122848	121122966	reg1020610.p1	5.656	+	AF169148 AF169149 NM_004276 NM_031205	-34537	+	BC030201 NM_001033677	-44486	+	AK223206 TSC_hg19_v1_chr12_-_121019185 AK303144 AF070660 AF117232 AJ306296 BC012505 NM_015918 NM_198202	-103719	-	TSC_hg19_v1_chr12_+_121124951 NM_014730	2031	+	TSC_hg19_v1_chr12_+_121124973 D63486 BC016297 BC000371	2132	+	CR936818 TSC_hg19_v1_chr12_+_121132759	9811	+	AF169148|CABP1|9478|calcium binding protein 1##AF169149|CABP1|9478|calcium binding protein 1##NM_004276|CABP1|9478|calcium binding protein 1##NM_031205|CABP1|9478|calcium binding protein 1##BC030201|CABP1|9478|calcium binding protein 1##NM_001033677|CABP1|9478|calcium binding protein 1##AK223206|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK303144|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF070660|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF117232|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AJ306296|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##BC012505|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015918|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_198202|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_014730|MLEC|9761|malectin##D63486|MLEC|9761|malectin##BC016297|MLEC|9761|malectin##BC000371|MLEC|9761|malectin	0.040241	
chr18	34902536	34902638	reg1023667.p1	5.656	+	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-493467	-	TSC_hg19_v1_chr18_+_34409093 AK304230 AL832625 NM_020776 BC038772 AK292288 BX648875 BC045585 AB587550 AM393103 AM393380 BC146691	-493504	+	AB073382 TSC_hg19_v1_chr18_-_34408948	-493635	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	243109	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	243412	-	TSC_hg19_v1_chr18_-_36915657 D28405	2013069	-	BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK304230|KIAA1328|57536|KIAA1328##AL832625|KIAA1328|57536|KIAA1328##NM_020776|KIAA1328|57536|KIAA1328##AK292288|KIAA1328|57536|KIAA1328##BX648875|KIAA1328|57536|KIAA1328##BC045585|KIAA1328|57536|KIAA1328##AM393103|KIAA1328|57536|KIAA1328##AM393380|KIAA1328|57536|KIAA1328##BC146691|KIAA1328|57536|KIAA1328##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4	0.0	
chr19	12167273	12167367	reg1024583.p1	5.656	+	NM_001080404	-3539	-	TSC_hg19_v1_chr19_-_12146530 AK098300 NM_001080411	-20779	-	TSC_hg19_v1_chr19_-_12146492 AK129553 BC047412	-20831	-	AK299732 AL832297 AK098117 NM_001136501 BC125185 BC125186 TSC_hg19_v1_chr19_+_12175767	8320	+	AK128700 TSC_hg19_v1_chr19_+_12203111 AK124155	35793	+	AL080125 AK023094 BC036714 TSC_hg19_v1_chr19_-_12251166 NM_001203250 NM_021143	83836	-	NM_001080404|ZNF878|729747|zinc finger protein 878##AK098300|ZNF433|163059|zinc finger protein 433##NM_001080411|ZNF433|163059|zinc finger protein 433##BC047412|ZNF433|163059|zinc finger protein 433##AK299732|ZNF844|284391|zinc finger protein 844##AL832297|ZNF844|284391|zinc finger protein 844##AK098117|ZNF844|284391|zinc finger protein 844##NM_001136501|ZNF844|284391|zinc finger protein 844##BC125185|ZNF844|284391|zinc finger protein 844##BC125186|ZNF844|284391|zinc finger protein 844##AK128700|ZNF788|388507|zinc finger family member 788##AL080125|ZNF20|7568|zinc finger protein 20##AK023094|ZNF20|7568|zinc finger protein 20##BC036714|ZNF20|7568|zinc finger protein 20##NM_001203250|ZNF20|7568|zinc finger protein 20##NM_021143|ZNF20|7568|zinc finger protein 20	0.994859	CTCF.p2:8:0.995
chr8	114478832	114478983	reg1025557.p1	5.656	+	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	-29778	-	AB114605 NM_198124	-89526	-	BC028739 AK313469 AF167082 NM_014379 AK297393	-3491941	-	TSC_hg19_v1_chr8_-_116680208 AK304046	2201313	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	2202258	-	TSC_hg19_v1_chr8_-_116681365 AF183810	2202428	-	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I	0.533942	CTCF.p2:-35:0.534
chr10	101036730	101036870	reg1024036.p1	5.655	+	AJ299720 AK094037 BC112356 AF282885 AF282886 AF282887 AJ299719 AK314759 NM_001166244 NM_001166245 NM_001166246 NM_021828	-41206	-	TSC_hg19_v1_chr10_-_100206705 NM_000195 NM_182639	-830089	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	-830125	-	TSC_hg19_v1_chr10_+_101088794 NM_020348	52024	+	TSC_hg19_v1_chr10_+_101089114 AK308618	52326	+	AK301916 AB587385 AY513279 M37400 AF052153 BC000498 AK312684 TSC_hg19_v1_chr10_-_101190382 AK293483 AK309174 NM_002079	153566	-	AJ299720|HPSE2|60495|heparanase 2##AK094037|HPSE2|60495|heparanase 2##BC112356|HPSE2|60495|heparanase 2##AF282885|HPSE2|60495|heparanase 2##AF282886|HPSE2|60495|heparanase 2##AF282887|HPSE2|60495|heparanase 2##AJ299719|HPSE2|60495|heparanase 2##AK314759|HPSE2|60495|heparanase 2##NM_001166244|HPSE2|60495|heparanase 2##NM_001166245|HPSE2|60495|heparanase 2##NM_001166246|HPSE2|60495|heparanase 2##NM_021828|HPSE2|60495|heparanase 2##NM_000195|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_182639|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_020348|CNNM1|26507|cyclin M1##AK308618|CNNM1|26507|cyclin M1##AK301916|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AY513279|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##M37400|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AF052153|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##BC000498|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK312684|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK293483|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##AK309174|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)##NM_002079|GOT1|2805|glutamic-oxaloacetic transaminase 1, soluble (aspartate aminotransferase 1)	0.958066	CTCF.p2:20:0.958
chr15	22194774	22194871	reg1024401.p1	5.655	+	NM_207355 BC066981	-111684	-	NM_207355 BC066981	-1122844	-	NM_001145004	-1447709	-	BC136985 NM_001004719	173655	+	BC136597 BC136598 NM_001005241 DQ786223	187623	+	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	278400	-	NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4	0.997092	CTCF.p2:9:0.997
chr18	44562790	44562909	reg1025216.p1	5.655	+	AK314984 NM_016427 BC036022	-870	-	NM_145653	-6401	-	BC103912 AB076840 AB464734 BC103913 EU446606 NM_001100817	-6639	-	TSC_hg19_v1_chr18_-_44676865 BC011894 AL136681 BC033031 AK054590 AK292098 BC038100 NM_032124	114022	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	139840	-	TSC_hg19_v1_chr18_-_44702734 AK027108	139884	-	AK314984|TCEB3B|51224|transcription elongation factor B polypeptide 3B (elongin A2)##NM_016427|TCEB3B|51224|transcription elongation factor B polypeptide 3B (elongin A2)##BC036022|TCEB3B|51224|transcription elongation factor B polypeptide 3B (elongin A2)##NM_145653|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##BC103912|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##AB076840|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##BC103913|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##EU446606|TCEB3C|162699|transcription elongation factor B polypeptide 3C (elongin A3)##NM_001100817|TCEB3CL|728929|transcription elongation factor B polypeptide 3C-like##BC011894|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##AL136681|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##BC033031|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##AK054590|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##AK292098|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##BC038100|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##NM_032124|HDHD2|84064|haloacid dehalogenase-like hydrolase domain containing 2##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1	0.930073	CTCF.p2:5:0.930
chr18	57661712	57661848	reg1024756.p1	5.655	+	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-94551	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-297130	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	-297189	-	AK314130 NM_005912	378220	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1495994	+	AK096495 NM_173557	1898523	-	NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152	0.907531	CTCF.p2:2:0.908
chr21	40745697	40745810	reg1025107.p1	5.655	+	TSC_hg19_v1_chr21_-_40721011 NM_004965 BC107741	-24723	-	TSC_hg19_v1_chr21_-_40720981 BC071643 BC023984 BC072672 BC070154 BC000075 AB209245 BC106080 BC070153 J02621 AK315410	-24783	-	AB590110 BT007337 DQ891741 DQ894919 TSC_hg19_v1_chr21_-_40720926	-24864	-	NM_004627 TSC_hg19_v1_chr21_+_40752235	6470	+	TSC_hg19_v1_chr21_+_40752257 AK299245 AK297186 AK293113	6496	+	TSC_hg19_v1_chr21_+_40752270 Y12478 AK293866 BC012415	6520	+	NM_004965|HMGN1|3150|high mobility group nucleosome binding domain 1##BC107741|HMGN1|3150|high mobility group nucleosome binding domain 1##BC071643|HMGN1|3150|high mobility group nucleosome binding domain 1##BC023984|HMGN1|3150|high mobility group nucleosome binding domain 1##BC072672|HMGN1|3150|high mobility group nucleosome binding domain 1##BC070154|HMGN1|3150|high mobility group nucleosome binding domain 1##BC000075|HMGN1|3150|high mobility group nucleosome binding domain 1##AB209245|HMGN1|3150|high mobility group nucleosome binding domain 1##BC106080|HMGN1|3150|high mobility group nucleosome binding domain 1##BC070153|HMGN1|3150|high mobility group nucleosome binding domain 1##J02621|HMGN1|3150|high mobility group nucleosome binding domain 1##AK315410|HMGN1|3150|high mobility group nucleosome binding domain 1##BT007337|HMGN1|3150|high mobility group nucleosome binding domain 1##DQ891741|HMGN1|3150|high mobility group nucleosome binding domain 1##DQ894919|HMGN1|3150|high mobility group nucleosome binding domain 1##NM_004627|WRB|7485|tryptophan rich basic protein##AK299245|WRB|7485|tryptophan rich basic protein##AK297186|WRB|7485|tryptophan rich basic protein##AK293113|WRB|7485|tryptophan rich basic protein##Y12478|WRB|7485|tryptophan rich basic protein##AK293866|WRB|7485|tryptophan rich basic protein##BC012415|WRB|7485|tryptophan rich basic protein	0.0	
chr1	213295932	213296085	reg1025030.p2	5.654	+	TSC_hg19_v1_chr1_+_213224716 AB070706 EF491805	-71248	+	TSC_hg19_v1_chr1_+_213224692 BC104769 BC143449 BC143473 BC143474	-71331	+	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	-71421	+	AK298182 TSC_hg19_v1_chr1_+_214161296 U44060	865281	+	BC024201 NM_002763	865851	+	TSC_hg19_v1_chr1_+_214454550 BC068511 BC049367 BC094747 BC057793 NM_020197 AF226053 BC098133 BC098276 BC098305 BC098335 BC028104 AK313868 AB590916 BC039890	1158429	+	AB070706|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC104769|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143449|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143473|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143474|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK298182|PROX1|5629|prospero homeobox 1##U44060|PROX1|5629|prospero homeobox 1##BC024201|PROX1|5629|prospero homeobox 1##NM_002763|PROX1|5629|prospero homeobox 1##BC068511|SMYD2|56950|SET and MYND domain containing 2##BC049367|SMYD2|56950|SET and MYND domain containing 2##BC094747|SMYD2|56950|SET and MYND domain containing 2##BC057793|SMYD2|56950|SET and MYND domain containing 2##NM_020197|SMYD2|56950|SET and MYND domain containing 2##AF226053|SMYD2|56950|SET and MYND domain containing 2##BC098133|SMYD2|56950|SET and MYND domain containing 2##BC098276|SMYD2|56950|SET and MYND domain containing 2##BC098305|SMYD2|56950|SET and MYND domain containing 2##BC098335|SMYD2|56950|SET and MYND domain containing 2##BC028104|SMYD2|56950|SET and MYND domain containing 2##AK313868|SMYD2|56950|SET and MYND domain containing 2##BC039890|SMYD2|56950|SET and MYND domain containing 2	0.999771	CTCF.p2:-7:1.000
chr2	38303831	38303939	reg1016098.p2	5.654	+	TSC_hg19_v1_chr2_-_38303315 AK312686 NM_000104	-565	-	U03688 BC012049 TSC_hg19_v1_chr2_-_38303294 AK297039 AK303862	-603	-	NM_001170793 NM_144713 AK057516 AF435956	-126285	+	AK316179 TSC_hg19_v1_chr2_-_38525609	221684	-	TSC_hg19_v1_chr2_-_38604411 BC053508 AK026946 AK225190 AK303985 AK308894	300519	-	TSC_hg19_v1_chr2_-_38604430 NM_001135673 NM_022374	300546	-	AK312686|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_000104|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##U03688|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##BC012049|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK303862|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1##AK316179|ATL2|64225|atlastin GTPase 2##BC053508|ATL2|64225|atlastin GTPase 2##AK026946|ATL2|64225|atlastin GTPase 2##AK225190|ATL2|64225|atlastin GTPase 2##AK303985|ATL2|64225|atlastin GTPase 2##AK308894|ATL2|64225|atlastin GTPase 2##NM_001135673|ATL2|64225|atlastin GTPase 2##NM_022374|ATL2|64225|atlastin GTPase 2	0.759164	CTCF.p2:46:0.564
chr4	185932738	185932853	reg1026519.p1	5.654	+	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	-185561	-	TSC_hg19_v1_chr4_-_185747123 L09229 AK292798	-185694	-	TSC_hg19_v1_chr4_-_185726866 AK296826	-205892	-	BC140795 BC144567 BC144568 BC144569 NM_001029887	7243	+	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	131675	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	192349	-	AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##L09229|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK292798|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##BC140795|HELT|391723|helt bHLH transcription factor##BC144567|HELT|391723|helt bHLH transcription factor##BC144569|HELT|391723|helt bHLH transcription factor##NM_001029887|HELT|391723|helt bHLH transcription factor##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430	0.641329	CTCF.p2:-7:0.641
chr5	128003007	128003159	reg1023347.p2	5.654	+	NM_001999 TSC_hg19_v1_chr5_-_127873939 AF193046	-129242	-	TSC_hg19_v1_chr5_-_127873553 AK300440	-129566	-	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	-583610	+	TSC_hg19_v1_chr5_+_128300789 BC041945	297720	+	TSC_hg19_v1_chr5_+_128301169 BX537383 NM_014031 NM_001017372 AK313456 AL833117	298114	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	427342	+	NM_001999|FBN2|2201|fibrillin 2##AF193046|FBN2|2201|fibrillin 2##AK300440|FBN2|2201|fibrillin 2##AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC041945|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##BX537383|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_014031|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_001017372|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AK313456|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AL833117|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1	0.159134	
chrX	24277818	24277933	reg1022667.p1	5.654	+	X59739 X59740 TSC_hg19_v1_chrX_+_24167864	-110003	+	AB209892 NM_001178086 NM_001178095 X59738 TSC_hg19_v1_chrX_+_24167845 NM_001178084 NM_001178085 NM_003410	-110083	+	TSC_hg19_v1_chrX_+_24073072 AK222577 AK290397 AK312247 AB590041 CU676476 DQ891794 DQ894977 AB451230 AB451353 L19161	-204797	+	NM_001136233	53556	-	NM_001136234	103002	+	NM_001142386 NM_005391 AK301965 TSC_hg19_v1_chrX_+_24483405 BC015948 L42452 CU677533	205582	+	X59739|ZFX|7543|zinc finger protein, X-linked##X59740|ZFX|7543|zinc finger protein, X-linked##AB209892|ZFX|7543|zinc finger protein, X-linked##NM_001178086|ZFX|7543|zinc finger protein, X-linked##NM_001178095|ZFX|7543|zinc finger protein, X-linked##X59738|ZFX|7543|zinc finger protein, X-linked##NM_001178084|ZFX|7543|zinc finger protein, X-linked##NM_001178085|ZFX|7543|zinc finger protein, X-linked##NM_003410|ZFX|7543|zinc finger protein, X-linked##AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##NM_001136233|FAM48B2|170067|family with sequence similarity 48, member B2##NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1##NM_001142386|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_005391|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AK301965|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##BC015948|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##L42452|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3	0.966805	CTCF.p2:-2:0.967
chrX	69989660	69989794	reg1026115.p1	5.654	+	TSC_hg19_v1_chrX_+_69674948 AK303377 NM_001166278	-314793	+	TSC_hg19_v1_chrX_+_69672415 AK304020 AK316518	-317321	+	TSC_hg19_v1_chrX_+_69672143 AB033058 NM_020730	-317552	+	AK057523 AK292471 BC036016 NM_001003811 NM_031276	138836	-	AF320612 BC033816 AX721169 BC021242 AK074865 AK075014 NM_001048164 NM_032803	161222	-	BT007203 TSC_hg19_v1_chrX_-_70288224 BC080535 AF171229 BC103847 BC103848 BC020559 NM_013346 AK312977	298473	-	AK303377|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_001166278|DLG3|1741|discs, large homolog 3 (Drosophila)##AK304020|DLG3|1741|discs, large homolog 3 (Drosophila)##AK316518|DLG3|1741|discs, large homolog 3 (Drosophila)##AB033058|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_020730|DLG3|1741|discs, large homolog 3 (Drosophila)##AK057523|TEX11|56159|testis expressed 11##AK292471|TEX11|56159|testis expressed 11##BC036016|TEX11|56159|testis expressed 11##NM_001003811|TEX11|56159|testis expressed 11##NM_031276|TEX11|56159|testis expressed 11##AF320612|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##BC033816|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK074865|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK075014|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_001048164|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_032803|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##BT007203|SNX12|29934|sorting nexin 12##BC080535|SNX12|29934|sorting nexin 12##AF171229|SNX12|29934|sorting nexin 12##BC103847|SNX12|29934|sorting nexin 12##BC103848|SNX12|29934|sorting nexin 12##BC020559|SNX12|29934|sorting nexin 12##NM_013346|SNX12|29934|sorting nexin 12##AK312977|SNX12|29934|sorting nexin 12	0.992841	CTCF.p2:-36:0.993
chr1	41582997	41583093	reg1025346.p1	5.653	+	BC022037 AK292296 BC037879 NM_001168247 AK097609 NM_144990	-95639	-	TSC_hg19_v1_chr1_+_41445419 AK299122 X52142 AK225899	-137611	+	AK297386 TSC_hg19_v1_chr1_+_41445376	-137665	+	AK301497 AK299383 NM_001172222	42526	-	BC009752 NM_001031694	44029	-	BC021252 NM_001172221	45643	-	BC022037|SLFNL1|200172|schlafen-like 1##AK292296|SLFNL1|200172|schlafen-like 1##BC037879|SLFNL1|200172|schlafen-like 1##NM_001168247|SLFNL1|200172|schlafen-like 1##AK097609|SLFNL1|200172|schlafen-like 1##NM_144990|SLFNL1|200172|schlafen-like 1##AK299122|CTPS|1503|CTP synthase##X52142|CTPS|1503|CTP synthase##AK225899|CTPS|1503|CTP synthase##AK297386|CTPS|1503|CTP synthase##AK301497|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK299383|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172222|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC021252|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172221|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	0.830069	CTCF.p2:-1:0.830
chr20	39692156	39692311	reg1024715.p2	5.653	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	-34569	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	-34739	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-374356	-	TSC_hg19_v1_chr20_+_39765861 AB210028	73629	+	TSC_hg19_v1_chr20_+_39766146 NM_002660 NM_182811 BC136466 BC144136 M34667	73955	+	TSC_hg19_v1_chr20_-_39766625 BC035080	74375	-	BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##AB210028|PLCG1|5335|phospholipase C, gamma 1##NM_002660|PLCG1|5335|phospholipase C, gamma 1##NM_182811|PLCG1|5335|phospholipase C, gamma 1##BC136466|PLCG1|5335|phospholipase C, gamma 1##BC144136|PLCG1|5335|phospholipase C, gamma 1##M34667|PLCG1|5335|phospholipase C, gamma 1	0.501229	CTCF.p2:9:0.501
chr15	64361758	64361938	reg1026874.p1	5.652	+	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	-23238	-	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-235708	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-235728	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	24249	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	26292	+	TSC_hg19_v1_chr15_+_64388200 AK310618 BC000357 AK222793 AB528736 AF065483 AF065484 BT006983 DQ890751 DQ893918	26358	+	AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1##AK310618|SNX1|6642|sorting nexin 1##BC000357|SNX1|6642|sorting nexin 1##AK222793|SNX1|6642|sorting nexin 1##AF065483|SNX1|6642|sorting nexin 1##AF065484|SNX1|6642|sorting nexin 1##BT006983|SNX1|6642|sorting nexin 1##DQ890751|SNX1|6642|sorting nexin 1##DQ893918|SNX1|6642|sorting nexin 1	0.0	
chr4	70689223	70689323	reg1023703.p2	5.652	+	BC010895 NM_014465	-62844	-	AK314209 AK304249 NM_001252274 NM_001252275 NM_006798	-170308	-	FJ664272 FJ664273 NM_001105677	-183914	-	S77383 Y11195 AK310845 U08098 TSC_hg19_v1_chr4_-_70725864 BC027956 NM_005420	36557	-	NM_001025104 NM_001890 X78416 BC128227 BC128228 U23157	107535	+	X55739 BC069554 BC096194 BC096195 BC096196 BC096197 NM_001891 X17070	137445	-	BC010895|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1##NM_014465|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1##AK314209|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##AK304249|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252274|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252275|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_006798|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##FJ664272|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##FJ664273|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##NM_001105677|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##S77383|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##Y11195|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##AK310845|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##U08098|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##BC027956|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##NM_005420|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##NM_001025104|CSN1S1|1446|casein alpha s1##NM_001890|CSN1S1|1446|casein alpha s1##X78416|CSN1S1|1446|casein alpha s1##BC128227|CSN1S1|1446|casein alpha s1##BC128228|CSN1S1|1446|casein alpha s1##U23157|CSN1S1|1446|casein alpha s1##X55739|CSN2|1447|casein beta##BC069554|CSN2|1447|casein beta##BC096194|CSN2|1447|casein beta##BC096195|CSN2|1447|casein beta##BC096196|CSN2|1447|casein beta##BC096197|CSN2|1447|casein beta##NM_001891|CSN2|1447|casein beta##X17070|CSN2|1447|casein beta	0.905927	CTCF.p2:2:0.640	CTCF.p2:-7:0.254
chr6	167528665	167528815	reg1025828.p4	5.652	+	NM_004367	-3446	+	TSC_hg19_v1_chr6_+_167412884 NM_007045 NM_194429 Y18046 AK294950 AK289846 BX647686 AK312791 BC011902 AB590215 CU680104 DQ893037 DQ896278 AJ420472	-115887	+	AK315467 TSC_hg19_v1_chr6_-_167370038 BC036282 NM_003730	-158683	-	NM_031409 U68031 U68030	7509	+	BC095537 NM_005299	42576	-	NM_001145121	55340	+	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6##NM_007045|FGFR1OP|11116|FGFR1 oncogene partner##NM_194429|FGFR1OP|11116|FGFR1 oncogene partner##Y18046|FGFR1OP|11116|FGFR1 oncogene partner##AK294950|FGFR1OP|11116|FGFR1 oncogene partner##AK289846|FGFR1OP|11116|FGFR1 oncogene partner##AK312791|FGFR1OP|11116|FGFR1 oncogene partner##BC011902|FGFR1OP|11116|FGFR1 oncogene partner##DQ893037|FGFR1OP|11116|FGFR1 oncogene partner##DQ896278|FGFR1OP|11116|FGFR1 oncogene partner##AJ420472|FGFR1OP|11116|FGFR1 oncogene partner##AK315467|RNASET2|8635|ribonuclease T2##BC036282|RNASET2|8635|ribonuclease T2##NM_003730|RNASET2|8635|ribonuclease T2##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31##NM_001145121|TCP10L2|401285|t-complex 10-like 2 (mouse)	0.08484	
chr7	17274313	17274460	reg1025266.p2	5.652	+	AY359065 BC058284 NM_176813	-352782	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-429715	-	TSC_hg19_v1_chr7_+_16793401 AK093487 NM_014399 AK026587 AK075475 AK316595 AY358995 AF100759 BC033863 AF120265 DQ892059 DQ895252 CR542107	-480930	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	63883	+	TSC_hg19_v1_chr7_+_17382906 BC021696	108520	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	705663	-	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK093487|TSPAN13|27075|tetraspanin 13##NM_014399|TSPAN13|27075|tetraspanin 13##AK026587|TSPAN13|27075|tetraspanin 13##AK075475|TSPAN13|27075|tetraspanin 13##AK316595|TSPAN13|27075|tetraspanin 13##AY358995|TSPAN13|27075|tetraspanin 13##AF100759|TSPAN13|27075|tetraspanin 13##BC033863|TSPAN13|27075|tetraspanin 13##AF120265|TSPAN13|27075|tetraspanin 13##DQ892059|TSPAN13|27075|tetraspanin 13##DQ895252|TSPAN13|27075|tetraspanin 13##CR542107|TSPAN13|27075|tetraspanin 13##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13	0.0	
chr9	131580597	131580766	reg1019829.p2	5.652	+	TSC_hg19_v1_chr9_+_131549578 AK289777 BC150311 AK123828 BC014898 BC132817 BC136509 AK001605 BC140080 BC143010 HQ258408 AB449899	-31085	+	NM_018201 TSC_hg19_v1_chr9_+_131549531	-31161	+	TSC_hg19_v1_chr9_-_131534207 BC052563 NM_006336	-46423	-	TSC_hg19_v1_chr9_+_131580758 BC016351 NM_004435 X79444 BC004922 AB590755	158	+	CU687792 BC010579 BC021273 BC046133 TSC_hg19_v1_chr9_-_131592067 BC056890 BC033677 BC063644	11384	-	AF161459 TSC_hg19_v1_chr9_-_131592073	11391	-	AK289777|TBC1D13|54662|TBC1 domain family, member 13##BC150311|TBC1D13|54662|TBC1 domain family, member 13##AK123828|TBC1D13|54662|TBC1 domain family, member 13##BC014898|TBC1D13|54662|TBC1 domain family, member 13##BC132817|TBC1D13|54662|TBC1 domain family, member 13##BC136509|TBC1D13|54662|TBC1 domain family, member 13##AK001605|TBC1D13|54662|TBC1 domain family, member 13##BC140080|TBC1D13|54662|TBC1 domain family, member 13##BC143010|TBC1D13|54662|TBC1 domain family, member 13##HQ258408|TBC1D13|54662|TBC1 domain family, member 13##AB449899|TBC1D13|54662|TBC1 domain family, member 13##NM_018201|TBC1D13|54662|TBC1 domain family, member 13##BC052563|ZER1|10444|zer-1 homolog (C. elegans)##NM_006336|ZER1|10444|zer-1 homolog (C. elegans)##BC016351|ENDOG|2021|endonuclease G##NM_004435|ENDOG|2021|endonuclease G##X79444|ENDOG|2021|endonuclease G##BC004922|ENDOG|2021|endonuclease G##BC010579|C9orf114|51490|chromosome 9 open reading frame 114##BC021273|C9orf114|51490|chromosome 9 open reading frame 114##BC046133|C9orf114|51490|chromosome 9 open reading frame 114##BC056890|C9orf114|51490|chromosome 9 open reading frame 114##BC033677|C9orf114|51490|chromosome 9 open reading frame 114##BC063644|C9orf114|51490|chromosome 9 open reading frame 114##AF161459|C9orf114|51490|chromosome 9 open reading frame 114	0.117134	
chr16	71446338	71446507	reg1004074.p1	5.651	+	TSC_hg19_v1_chr16_+_71392648 BC015484 X56667	-53778	+	NM_001740 NM_007088 AK222495 AK222648 AK291096 TSC_hg19_v1_chr16_+_71392625	-53801	+	BC034468 TSC_hg19_v1_chr16_-_71323306 AK226169 BX648660 AK315056 NM_001099642 AK123343 AF458590 NM_018348 BC035005	-123121	-	TSC_hg19_v1_chr16_-_71496127 AF507946 BC007256 NM_145911 BC048974 AK091039 AX746746 AK297130	49699	-	AK123826 TSC_hg19_v1_chr16_+_71496196	49766	+	AK292260 BC030658 AK057330 BC047091 NM_006961	76793	-	BC015484|CALB2|794|calbindin 2##X56667|CALB2|794|calbindin 2##NM_001740|CALB2|794|calbindin 2##NM_007088|CALB2|794|calbindin 2##AK222495|CALB2|794|calbindin 2##AK222648|CALB2|794|calbindin 2##AK291096|CALB2|794|calbindin 2##BC034468|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK226169|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BX648660|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK315056|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_001099642|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AF458590|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_018348|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BC035005|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AF507946|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC007256|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_145911|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC048974|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK091039|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK297130|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19	0.999634	CTCF.p2:-47:1.000
chr19	18631163	18631326	reg1027214.p1	5.651	+	AK296022 TSC_hg19_v1_chr19_-_18548975 AK092179 AX747394 NM_001170938 NM_016368	-82204	-	CU676344 DQ893465 DQ896336 AK001325 TSC_hg19_v1_chr19_-_18548942 AK093461 NM_001170939 AF207640 BC018952 AF086921 BC017189 BC066902 AF220530 AK021526	-82368	-	AL137749 NM_001253389	-83126	-	AB208794 TSC_hg19_v1_chr19_-_18632875 AK293105 AK225481 U16282	1622	-	TSC_hg19_v1_chr19_-_18632948 BC049195 NM_006532	1683	-	TSC_hg19_v1_chr19_-_18653874 AK300571	22533	-	AK296022|ISYNA1|51477|inositol-3-phosphate synthase 1##AK092179|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001170938|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_016368|ISYNA1|51477|inositol-3-phosphate synthase 1##DQ893465|ISYNA1|51477|inositol-3-phosphate synthase 1##DQ896336|ISYNA1|51477|inositol-3-phosphate synthase 1##AK001325|ISYNA1|51477|inositol-3-phosphate synthase 1##AK093461|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001170939|ISYNA1|51477|inositol-3-phosphate synthase 1##AF207640|ISYNA1|51477|inositol-3-phosphate synthase 1##BC018952|ISYNA1|51477|inositol-3-phosphate synthase 1##AF086921|ISYNA1|51477|inositol-3-phosphate synthase 1##BC066902|ISYNA1|51477|inositol-3-phosphate synthase 1##AF220530|ISYNA1|51477|inositol-3-phosphate synthase 1##AK021526|ISYNA1|51477|inositol-3-phosphate synthase 1##AL137749|ISYNA1|51477|inositol-3-phosphate synthase 1##NM_001253389|ISYNA1|51477|inositol-3-phosphate synthase 1##AB208794|ELL|8178|elongation factor RNA polymerase II##AK293105|ELL|8178|elongation factor RNA polymerase II##AK225481|ELL|8178|elongation factor RNA polymerase II##U16282|ELL|8178|elongation factor RNA polymerase II##BC049195|ELL|8178|elongation factor RNA polymerase II##NM_006532|ELL|8178|elongation factor RNA polymerase II##AK300571|FKBP8|23770|FK506 binding protein 8, 38kDa	0.0	
chr19	42637136	42637317	reg1004511.p2	5.651	+	M36718 X13809 BT007438 AB590941 TSC_hg19_v1_chr19_-_42636564 BC006101 M36653 NM_001207025 NM_001207026 NM_001247994 NM_002698 X53468	-635	-	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	-56860	+	TSC_hg19_v1_chr19_+_42580286 NM_022752	-56944	+	TSC_hg19_v1_chr19_-_42721830 BC027930 NM_133328 AY125488 BC013372 AK307895 AK130203 AK075328	84613	-	TSC_hg19_v1_chr19_+_42724463 AK298895 AB075831 NM_133444	87238	+	AK122649 TSC_hg19_v1_chr19_+_42724498 BC013013	87275	+	M36718|POU2F2|5452|POU class 2 homeobox 2##X13809|POU2F2|5452|POU class 2 homeobox 2##BT007438|POU2F2|5452|POU class 2 homeobox 2##BC006101|POU2F2|5452|POU class 2 homeobox 2##M36653|POU2F2|5452|POU class 2 homeobox 2##NM_001207025|POU2F2|5452|POU class 2 homeobox 2##NM_001207026|POU2F2|5452|POU class 2 homeobox 2##NM_001247994|POU2F2|5452|POU class 2 homeobox 2##NM_002698|POU2F2|5452|POU class 2 homeobox 2##X53468|POU2F2|5452|POU class 2 homeobox 2##AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574##NM_022752|ZNF574|64763|zinc finger protein 574##BC027930|DEDD2|162989|death effector domain containing 2##NM_133328|DEDD2|162989|death effector domain containing 2##AY125488|DEDD2|162989|death effector domain containing 2##BC013372|DEDD2|162989|death effector domain containing 2##AK307895|DEDD2|162989|death effector domain containing 2##AK130203|DEDD2|162989|death effector domain containing 2##AK075328|DEDD2|162989|death effector domain containing 2##AK298895|ZNF526|116115|zinc finger protein 526##AB075831|ZNF526|116115|zinc finger protein 526##NM_133444|ZNF526|116115|zinc finger protein 526##AK122649|ZNF526|116115|zinc finger protein 526##BC013013|ZNF526|116115|zinc finger protein 526	0.028129	
chr3	128806964	128807070	reg1026560.p1	5.651	+	X52997 BC030229 NM_000174	-27391	+	NM_024768	-86546	+	AK056377 BC038736 TSC_hg19_v1_chr3_-_128712920 AB033083 NM_020741	-94066	-	TSC_hg19_v1_chr3_-_128840462 BC082988 D45418 AK128345 AK291014 BC062319	33412	-	TSC_hg19_v1_chr3_-_128840648 AY166852 NM_001204886 NM_001204887 NM_001204888 NM_198490 NM_001204885	33667	-	NM_001204884 TSC_hg19_v1_chr3_-_128840874 NM_001204883	33907	-	X52997|GP9|2815|glycoprotein IX (platelet)##BC030229|GP9|2815|glycoprotein IX (platelet)##NM_000174|GP9|2815|glycoprotein IX (platelet)##NM_024768|CCDC48|79825|coiled-coil domain containing 48##AK056377|KIAA1257|57501|KIAA1257##BC038736|KIAA1257|57501|KIAA1257##AB033083|KIAA1257|57501|KIAA1257##NM_020741|KIAA1257|57501|KIAA1257##D45418|RAB43|339122|RAB43, member RAS oncogene family##AK128345|RAB43|339122|RAB43, member RAS oncogene family##AK291014|RAB43|339122|RAB43, member RAS oncogene family##BC062319|RAB43|339122|RAB43, member RAS oncogene family##AY166852|RAB43|339122|RAB43, member RAS oncogene family##NM_001204886|RAB43|339122|RAB43, member RAS oncogene family##NM_001204887|RAB43|339122|RAB43, member RAS oncogene family##NM_001204888|RAB43|339122|RAB43, member RAS oncogene family##NM_198490|RAB43|339122|RAB43, member RAS oncogene family##NM_001204885|RAB43|339122|RAB43, member RAS oncogene family##NM_001204884|RAB43|339122|RAB43, member RAS oncogene family##NM_001204883|RAB43|339122|RAB43, member RAS oncogene family	0.297918	CTCF.p2:2:0.298
chr4	169506796	169506909	reg1019693.p1	5.651	+	TSC_hg19_v1_chr4_+_169418204 AF464873 NM_001166108 NM_016081 BC140850 BC144666	-88632	+	TSC_hg19_v1_chr4_-_169401630 CR933601 NM_001012967	-105232	-	TSC_hg19_v1_chr4_-_169401573 AK096369	-105272	-	TSC_hg19_v1_chr4_+_169552755 NM_001166109 AK095512	45944	+	TSC_hg19_v1_chr4_+_169753245 NM_001166110 AB023209	246325	+	BC021973 BC033650 TSC_hg19_v1_chr4_-_169931407 AK027337 AK291756 AK299847 AL833393 NM_032783	424606	-	AF464873|PALLD|23022|palladin, cytoskeletal associated protein##NM_001166108|PALLD|23022|palladin, cytoskeletal associated protein##NM_016081|PALLD|23022|palladin, cytoskeletal associated protein##BC140850|PALLD|23022|palladin, cytoskeletal associated protein##BC144666|PALLD|23022|palladin, cytoskeletal associated protein##CR933601|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like##NM_001012967|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like##AK096369|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like##NM_001166109|PALLD|23022|palladin, cytoskeletal associated protein##AK095512|PALLD|23022|palladin, cytoskeletal associated protein##NM_001166110|PALLD|23022|palladin, cytoskeletal associated protein##AB023209|PALLD|23022|palladin, cytoskeletal associated protein##BC021973|CBR4|84869|carbonyl reductase 4##BC033650|CBR4|84869|carbonyl reductase 4##AK027337|CBR4|84869|carbonyl reductase 4##AK291756|CBR4|84869|carbonyl reductase 4##AL833393|CBR4|84869|carbonyl reductase 4##NM_032783|CBR4|84869|carbonyl reductase 4	0.02851	
chr1	167509690	167509871	reg1024161.p1	5.650	+	AB590419 CU693020 DQ893778 EU176191 X55510 X55511 X55512 BC025703 AK128376 AK313946 J04132 AK223325 NM_000734 NM_198053	-22007	-	TSC_hg19_v1_chr1_+_167298389 AY113189 BC001664 BC003571	-211341	+	NM_001198783 TSC_hg19_v1_chr1_+_167298306	-211482	+	DQ891131 DQ894310 AB463481 AY359071 BC006786 BC008628 TSC_hg19_v1_chr1_-_167523000 AK130006 AK315497 AK075375 AK095456 AF084523	13211	-	TSC_hg19_v1_chr1_-_167523043 NM_003851	13283	-	AF545852 TSC_hg19_v1_chr1_+_167599495 NM_052862 AK130798	89633	+	DQ893778|CD247|919|CD247 molecule##EU176191|CD247|919|CD247 molecule##X55510|CD247|919|CD247 molecule##X55511|CD247|919|CD247 molecule##X55512|CD247|919|CD247 molecule##BC025703|CD247|919|CD247 molecule##AK128376|CD247|919|CD247 molecule##AK313946|CD247|919|CD247 molecule##J04132|CD247|919|CD247 molecule##AK223325|CD247|919|CD247 molecule##NM_000734|CD247|919|CD247 molecule##NM_198053|CD247|919|CD247 molecule##AY113189|POU2F1|5451|POU class 2 homeobox 1##BC001664|POU2F1|5451|POU class 2 homeobox 1##BC003571|POU2F1|5451|POU class 2 homeobox 1##NM_001198783|POU2F1|5451|POU class 2 homeobox 1##DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1##NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AF545852|RCSD1|92241|RCSD domain containing 1##NM_052862|RCSD1|92241|RCSD domain containing 1	0.999766	CTCF.p2:16:1.000
chr12	22784917	22785028	reg1024022.p1	5.650	+	TSC_hg19_v1_chr12_+_22778130 CU688188 BC006111 AL137750 AK074425	-6825	+	AF207600 TSC_hg19_v1_chr12_+_22778077 BC066907 NM_001039481 NM_018638	-6929	+	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	-87506	-	NM_178010 AK098610 AK223536	952554	-	AK074317 TSC_hg19_v1_chr12_-_24102605 BC065532 AB081589 NM_006940	1317630	-	TSC_hg19_v1_chr12_-_24103855 AK299607 AK096569	1318882	-	BC006111|ETNK1|55500|ethanolamine kinase 1##AL137750|ETNK1|55500|ethanolamine kinase 1##AK074425|ETNK1|55500|ethanolamine kinase 1##AF207600|ETNK1|55500|ethanolamine kinase 1##BC066907|ETNK1|55500|ethanolamine kinase 1##NM_001039481|ETNK1|55500|ethanolamine kinase 1##NM_018638|ETNK1|55500|ethanolamine kinase 1##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528##NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5##AK098610|SOX5|6660|SRY (sex determining region Y)-box 5##AK223536|SOX5|6660|SRY (sex determining region Y)-box 5##AK074317|SOX5|6660|SRY (sex determining region Y)-box 5##BC065532|SOX5|6660|SRY (sex determining region Y)-box 5##AB081589|SOX5|6660|SRY (sex determining region Y)-box 5##NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5##AK299607|SOX5|6660|SRY (sex determining region Y)-box 5##AK096569|SOX5|6660|SRY (sex determining region Y)-box 5	0.97194	CTCF.p2:18:0.972
chr17	62493518	62493650	reg1027446.p1	5.650	+	AF177201 CU679261 TSC_hg19_v1_chr17_-_62493178 AK307801 BC009194 NM_007215	-447	-	BC040522 NM_018469 TSC_hg19_v1_chr17_-_62340654	-152930	-	TSC_hg19_v1_chr17_-_62340645 BC036672	-152937	-	AB451257 AB451382 BT006943 DQ890687 DQ893774 AB384902 TSC_hg19_v1_chr17_-_62502320	8699	-	TSC_hg19_v1_chr17_-_62502393 BC016027 AB209919	8798	-	TSC_hg19_v1_chr17_-_62502408 X15729 AK297192 AK297753 AK297905 BX571764 X52104	8821	-	AF177201|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##AK307801|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##BC009194|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##NM_007215|POLG2|11232|polymerase (DNA directed), gamma 2, accessory subunit##BC040522|TEX2|55852|testis expressed 2##NM_018469|TEX2|55852|testis expressed 2##BC036672|TEX2|55852|testis expressed 2##AB451257|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AB451382|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##BT006943|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##DQ890687|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##DQ893774|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##BC016027|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AB209919|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##X15729|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AK297192|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AK297753|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##AK297905|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##BX571764|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5##X52104|DDX5|1655|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	0.335819	CTCF.p2:19:0.320
chr6	31564888	31564990	reg1024939.p1	5.650	+	AB055881 AB590963 AJ223153 BC052582 BC018752 AF031136 AF031137 AF031138 NM_001145466 NM_001145467 NM_147130	-4310	-	BC103855 BC103856 NM_001166538 NM_007161 NM_205840 Y18486 Y18487 Y18488 Y18489 Y18490 AY852265 AY852266	-9914	+	AF000424 NM_205837 AF000426	-10390	+	TSC_hg19_v1_chr6_+_31583010 NM_004847 BC009474 NM_001623 U49392 AF088038 AK290771 U19713 D86438 EF070983 EU832665 EU832744	18103	+	TSC_hg19_v1_chr6_+_31583819 NM_032955 AF299329 EF070982 AF299327 CR542153	18888	+	TSC_hg19_v1_chr6_+_31588456 NM_004638 NM_080686	23512	+	AB055881|NCR3|259197|natural cytotoxicity triggering receptor 3##AJ223153|NCR3|259197|natural cytotoxicity triggering receptor 3##BC052582|NCR3|259197|natural cytotoxicity triggering receptor 3##BC018752|NCR3|259197|natural cytotoxicity triggering receptor 3##AF031136|NCR3|259197|natural cytotoxicity triggering receptor 3##AF031137|NCR3|259197|natural cytotoxicity triggering receptor 3##AF031138|NCR3|259197|natural cytotoxicity triggering receptor 3##NM_001145466|NCR3|259197|natural cytotoxicity triggering receptor 3##NM_001145467|NCR3|259197|natural cytotoxicity triggering receptor 3##NM_147130|NCR3|259197|natural cytotoxicity triggering receptor 3##BC103855|LST1|7940|leukocyte specific transcript 1##BC103856|LST1|7940|leukocyte specific transcript 1##NM_001166538|LST1|7940|leukocyte specific transcript 1##NM_007161|LST1|7940|leukocyte specific transcript 1##NM_205840|LST1|7940|leukocyte specific transcript 1##Y18486|LST1|7940|leukocyte specific transcript 1##Y18487|LST1|7940|leukocyte specific transcript 1##Y18488|LST1|7940|leukocyte specific transcript 1##Y18489|LST1|7940|leukocyte specific transcript 1##Y18490|LST1|7940|leukocyte specific transcript 1##AY852265|LST1|7940|leukocyte specific transcript 1##AY852266|LST1|7940|leukocyte specific transcript 1##AF000424|LST1|7940|leukocyte specific transcript 1##NM_205837|LST1|7940|leukocyte specific transcript 1##AF000426|LST1|7940|leukocyte specific transcript 1##NM_004847|AIF1|199|allograft inflammatory factor 1##BC009474|AIF1|199|allograft inflammatory factor 1##NM_001623|AIF1|199|allograft inflammatory factor 1##U49392|AIF1|199|allograft inflammatory factor 1##AF088038|AIF1|199|allograft inflammatory factor 1##AK290771|AIF1|199|allograft inflammatory factor 1##U19713|AIF1|199|allograft inflammatory factor 1##D86438|AIF1|199|allograft inflammatory factor 1##EF070983|AIF1|199|allograft inflammatory factor 1##EU832665|AIF1|199|allograft inflammatory factor 1##EU832744|AIF1|199|allograft inflammatory factor 1##NM_032955|AIF1|199|allograft inflammatory factor 1##EF070982|AIF1|199|allograft inflammatory factor 1##AF299327|AIF1|199|allograft inflammatory factor 1##CR542153|AIF1|199|allograft inflammatory factor 1##NM_004638|PRRC2A|7916|proline-rich coiled-coil 2A##NM_080686|PRRC2A|7916|proline-rich coiled-coil 2A	0.586768	CTCF.p2:15:0.587
chr3	188548869	188549007	reg1027321.p2	5.649	+	NM_001167671 BC130584 BC144076	-605704	+	NM_005578 U49957	-618218	+	TSC_hg19_v1_chr3_-_187871925 BC042414	-677068	-	TSC_hg19_v1_chr3_+_188664993 AK123232	116032	+	AK125682 NM_198485 BC101550 BC101552	340873	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	800321	+	NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##NM_005578|LPP|4026|LIM domain containing preferred translocation partner in lipoma##U49957|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC042414|LPP-AS2|339929|LPP antisense RNA 2 (non-protein coding)##AK123232|TPRG1|285386|tumor protein p63 regulated 1##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63	0.811202	CTCF.p2:-21:0.811
chr5	123860363	123860501	reg1025645.p1	5.649	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1012550	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1101288	-	NM_001136239 AK297992 AF272898 AF272899	-1435588	+	BC131507 AB033107 BC151226 NM_020747	220356	-	NM_001146319 AK316288 AK300154	1835382	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1898411	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.0	
chr1	234324383	234324557	reg1024702.p2	5.648	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-283858	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-574551	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	-574647	+	TSC_hg19_v1_chr1_+_234350005 BC037878	25536	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	184902	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	290390	-	AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##BC037878|SLC35F3|148641|solute carrier family 35, member F3##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1	0.869245	CTCF.p2:-1:0.869
chr14	104690916	104691014	reg1024495.p2	5.648	+	TSC_hg19_v1_chr14_+_104605441 AB033062	-85513	+	NM_015656	-85906	+	AX781433 BX247999 NM_001080464 AX721044 BC035836 BC136637 AX781428 AX781429 AX781430 AX781431 AX781435	-138904	+	AK095913 NM_001008404 AK297818 AK309489 BC041103	355121	+	AB464314 AK124477 NM_207379	380123	-	TSC_hg19_v1_chr14_+_105147469 BC035345	456497	+	AB033062|KIF26A|26153|kinesin family member 26A##NM_015656|KIF26A|26153|kinesin family member 26A##AX781433|ASPG|374569|asparaginase homolog (S. cerevisiae)##BX247999|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_001080464|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC035836|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC136637|ASPG|374569|asparaginase homolog (S. cerevisiae)##AX781435|ASPG|374569|asparaginase homolog (S. cerevisiae)##AK095913|C14orf180|400258|chromosome 14 open reading frame 180##NM_001008404|C14orf180|400258|chromosome 14 open reading frame 180##AK297818|C14orf180|400258|chromosome 14 open reading frame 180##AK309489|C14orf180|400258|chromosome 14 open reading frame 180##BC041103|C14orf180|400258|chromosome 14 open reading frame 180##AK124477|TMEM179|388021|transmembrane protein 179##NM_207379|TMEM179|388021|transmembrane protein 179	0.997011	CTCF.p2:-13:0.997
chr21	45283525	45283705	reg1025619.p1	5.648	+	TSC_hg19_v1_chr21_+_45209457 AK223185 AK303000 AK223215 AK313116 BC000380 U79775 CU674182 DQ891391 DQ894567 BC014787	-74130	+	TSC_hg19_v1_chr21_+_45209429 NM_003683	-74200	+	TSC_hg19_v1_chr21_-_45196227 BC010532 L03558 NM_000100	-87386	-	TSC_hg19_v1_chr21_+_45285029 AY358704	1445	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	1508	+	AK300562 NM_001037553	61663	+	AK223185|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK303000|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK223215|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK313116|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC000380|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##U79775|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ891391|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ894567|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC014787|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##NM_003683|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC010532|CSTB|1476|cystatin B (stefin B)##L03558|CSTB|1476|cystatin B (stefin B)##NM_000100|CSTB|1476|cystatin B (stefin B)##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3	0.0	
chr5	137968958	137969069	reg1025113.p1	5.648	+	NM_004134	-57696	-	AK222758 TSC_hg19_v1_chr5_-_137911101 BC000478 BC024034 AK297897 AK293990 L11066 AK315177	-57925	-	BC030634 CU674234 TSC_hg19_v1_chr5_-_137911029 AB463063 EU446981 AK297795 L15189	-57994	-	TSC_hg19_v1_chr5_+_138089107 NM_001903 AK296708 AK300439 D14705	120081	+	TSC_hg19_v1_chr5_+_138089137 AK094151 D13866 BC000385 AK304267	120118	+	AK309790 TSC_hg19_v1_chr5_-_138211025 AB007876 BC028172 AK291064 AK297332	242000	-	NM_004134|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK222758|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC000478|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC024034|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK297897|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK293990|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##L11066|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK315177|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC030634|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##EU446981|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK297795|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##L15189|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	0.939216	CTCF.p2:-5:0.939
chr3	158390501	158390609	reg1024011.p1	5.647	+	CU678961 EU831968 EU832061 AF087851 AF282594 AF282626 BC008438 BC005346 NM_020169	-182	-	TSC_hg19_v1_chr3_+_158362392 CU690604	-28139	+	TSC_hg19_v1_chr3_+_158362373 AK315031	-28174	+	DQ891333 DQ893367 DQ894516 DQ896684 BC029640 TSC_hg19_v1_chr3_-_158450211	59653	-	U27185 AK130079 TSC_hg19_v1_chr3_-_158450247	59686	-	TSC_hg19_v1_chr3_-_158450277 NM_002888 NM_206963	59725	-	EU831968|LXN|56925|latexin##EU832061|LXN|56925|latexin##AF087851|LXN|56925|latexin##AF282594|LXN|56925|latexin##AF282626|LXN|56925|latexin##BC008438|LXN|56925|latexin##BC005346|LXN|56925|latexin##NM_020169|LXN|56925|latexin##AK315031|GFM1|85476|G elongation factor, mitochondrial 1##DQ891333|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ893367|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ894516|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ896684|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##BC029640|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##U27185|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##AK130079|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##NM_002888|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##NM_206963|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1	0.952406	CTCF.p2:23:0.952
chr9	33617683	33617780	reg1026168.p1	5.647	+	NM_001244752	-93321	+	TSC_hg19_v1_chr9_-_33473921 NM_022917 NM_139235	-143801	-	TSC_hg19_v1_chr9_-_33473890 BC020450 AK026258 AK293969	-143835	-	TSC_hg19_v1_chr9_+_33624216 M62898	6487	+	AB298285 NM_001197097 NM_007343 AB528734 X71345 X72781 TSC_hg19_v1_chr9_+_33750676 BC030238 AY052783 AB298286 NM_001197098	132909	+	BC069476 BC069494 NM_002771 X15505 D45417	177833	+	NM_001244752|ANKRD18B|441459|ankyrin repeat domain 18B##NM_022917|NOL6|65083|nucleolar protein family 6 (RNA-associated)##NM_139235|NOL6|65083|nucleolar protein family 6 (RNA-associated)##BC020450|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AK026258|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AK293969|NOL6|65083|nucleolar protein family 6 (RNA-associated)##M62898|ANXA2P2|304|annexin A2 pseudogene 2##AB298285|PRSS3|5646|protease, serine, 3##NM_001197097|PRSS3|5646|protease, serine, 3##NM_007343|PRSS3|5646|protease, serine, 3##X71345|PRSS3|5646|protease, serine, 3##X72781|PRSS3|5646|protease, serine, 3##BC030238|PRSS3|5646|protease, serine, 3##AY052783|PRSS3|5646|protease, serine, 3##AB298286|PRSS3|5646|protease, serine, 3##NM_001197098|PRSS3|5646|protease, serine, 3##BC069476|PRSS3|5646|protease, serine, 3##BC069494|PRSS3|5646|protease, serine, 3##NM_002771|PRSS3|5646|protease, serine, 3##X15505|PRSS3|5646|protease, serine, 3##D45417|PRSS3|5646|protease, serine, 3	0.999247	CTCF.p2:-3:0.999
chr1	154377701	154377804	reg1023806.p2	5.645	+	NM_000565 NM_001206866 NM_181359 X12830 BC089410 TSC_hg19_v1_chr1_+_154377822	-2	+	TSC_hg19_v1_chr1_+_154301249 AK054886	-76496	+	AY302537 NM_020452	-77477	+	AK223582 BC132684 BC132686 TSC_hg19_v1_chr1_+_154377856	100	+	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	322	+	BC143765 BC117210 NM_001010846	96772	-	NM_000565|IL6R|3570|interleukin 6 receptor##NM_001206866|IL6R|3570|interleukin 6 receptor##NM_181359|IL6R|3570|interleukin 6 receptor##X12830|IL6R|3570|interleukin 6 receptor##BC089410|IL6R|3570|interleukin 6 receptor##AK054886|ATP8B2|57198|ATPase, class I, type 8B, member 2##AY302537|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_020452|ATP8B2|57198|ATPase, class I, type 8B, member 2##AK223582|IL6R|3570|interleukin 6 receptor##BC132684|IL6R|3570|interleukin 6 receptor##BC132686|IL6R|3570|interleukin 6 receptor##AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor##BC143765|SHE|126669|Src homology 2 domain containing E##BC117210|SHE|126669|Src homology 2 domain containing E##NM_001010846|SHE|126669|Src homology 2 domain containing E	0.0	
chr2	98280952	98281088	reg1025519.p2	5.645	+	TSC_hg19_v1_chr2_-_98280591 NM_005735	-446	-	TSC_hg19_v1_chr2_-_98280472 CU678694 DQ893438 DQ896748 AB528334 BC006372 X82207 BC004374 BC010090	-590	-	TSC_hg19_v1_chr2_-_98275064 BC025274	-5940	-	L05148 NM_001079 AK303341 AK310637 AK310628 BC053878	49022	+	AB083211 NM_207519	69848	+	AK025852 TSC_hg19_v1_chr2_-_98408976	127902	-	NM_005735|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##DQ893438|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##DQ896748|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC006372|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##X82207|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC004374|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC010090|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##BC025274|ACTR1B|10120|ARP1 actin-related protein 1 homolog B, centractin beta (yeast)##L05148|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_001079|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK303341|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310637|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310628|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##BC053878|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AB083211|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_207519|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK025852|TMEM131|23505|transmembrane protein 131	0.924073	CTCF.p2:-14:0.924
chr6	2989354	2989470	reg1025301.p1	5.645	+	AK094983 NM_001195291 NM_004568	-17014	-	TSC_hg19_v1_chr6_-_2971981 AK314578	-17363	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	-17601	-	TSC_hg19_v1_chr6_+_3000111 NM_000904 AK311746 AK056981 J02888	10716	+	AK314176 TSC_hg19_v1_chr6_+_3064200 AB208926	74754	+	BC126254 BC126256 HQ258488 NM_003804 U50062 AK304701	87652	+	AK094983|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_001195291|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_004568|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314578|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_000904|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK311746|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK056981|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##J02888|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK314176|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AB208926|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1	0.918546	CTCF.p2:-6:0.919
chr8	5934398	5934528	reg1027951.p1	5.645	+	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	-1082169	-	AY017307 TSC_hg19_v1_chr8_-_4852228	-1082238	-	AK128880 TSC_hg19_v1_chr8_-_2585966	-3348481	-	TSC_hg19_v1_chr8_-_6264053 BC036625	329594	-	TSC_hg19_v1_chr8_-_6264070 AK025595 BC024246	329611	-	NM_001172574 NM_001172575 NM_024596 BC056195 BC030702 AK308387 TSC_hg19_v1_chr8_+_6264158	329672	+	AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AK025595|LOC100287015|100287015|uncharacterized LOC100287015##NM_001172574|MCPH1|79648|microcephalin 1##NM_001172575|MCPH1|79648|microcephalin 1##NM_024596|MCPH1|79648|microcephalin 1##BC056195|MCPH1|79648|microcephalin 1##BC030702|MCPH1|79648|microcephalin 1##AK308387|MCPH1|79648|microcephalin 1	0.996114	CTCF.p2:-23:0.996
chr9	1018245	1018353	reg1024565.p1	5.645	+	AF193873 TSC_hg19_v1_chr9_+_977425	-40894	+	NM_021240 BC113584 BC117245	-41334	+	AF130728 AY442914 AY442915 NM_021951 AK313594 AJ276801 AL162131 BC040847 EU446468 AB463577 CU691924	-176536	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	32045	+	TSC_hg19_v1_chr9_+_1050370 Y19052	32071	+	AF130729 NM_181872	32310	+	AF193873|DMRT3|58524|doublesex and mab-3 related transcription factor 3##NM_021240|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC113584|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC117245|DMRT3|58524|doublesex and mab-3 related transcription factor 3##AF130728|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442914|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442915|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021951|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AK313594|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AJ276801|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AL162131|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BC040847|DMRT1|1761|doublesex and mab-3 related transcription factor 1##EU446468|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2	0.989198	CTCF.p2:7:0.989
chrX	120442308	120442488	reg1011010.p1	5.645	+	TSC_hg19_v1_chrX_+_120181464 BC050732 NM_012084 AK313356	-260958	+	BC029540 NM_001080141 NM_001080146	-322761	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080141 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	-327621	-	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	1875842	+	TSC_hg19_v1_chrX_-_122866885 AK001758	2424485	-	TSC_hg19_v1_chrX_-_122866897 NM_001081550	2424499	-	BC050732|GLUD2|2747|glutamate dehydrogenase 2##NM_012084|GLUD2|2747|glutamate dehydrogenase 2##AK313356|GLUD2|2747|glutamate dehydrogenase 2##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##AK001758|THOC2|57187|THO complex 2##NM_001081550|THOC2|57187|THO complex 2	0.0	
chrX	55781424	55781605	reg1025558.p2	5.645	+	TSC_hg19_v1_chrX_+_55744181 NM_006064 NM_016656 AL831926 AK289407 BC034726 X90530	-37326	+	BC012934 NM_198451	-131682	+	NM_201286 BC035907	-265882	-	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	477396	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	808537	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	974177	+	NM_006064|RRAGB|10325|Ras-related GTP binding B##NM_016656|RRAGB|10325|Ras-related GTP binding B##AL831926|RRAGB|10325|Ras-related GTP binding B##AK289407|RRAGB|10325|Ras-related GTP binding B##BC034726|RRAGB|10325|Ras-related GTP binding B##X90530|RRAGB|10325|Ras-related GTP binding B##BC012934|FOXR2|139628|forkhead box R2##NM_198451|FOXR2|139628|forkhead box R2##NM_201286|USP51|158880|ubiquitin specific peptidase 51##BC035907|USP51|158880|ubiquitin specific peptidase 51##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643	0.0	
chr3	57112858	57113022	reg1024469.p2	5.644	+	AY221117 NM_181727 BC126274 BC136498	-18437	+	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	-277029	-	AK293864 AB209661 NM_001128616	-303271	-	AF433662 AK302493 NM_001128615	373	-	AF458067 TSC_hg19_v1_chr3_-_57199347	86393	-	AF494208 NM_017563 TSC_hg19_v1_chr3_-_57199413	86470	-	AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12##AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF458067|IL17RD|54756|interleukin 17 receptor D##AF494208|IL17RD|54756|interleukin 17 receptor D##NM_017563|IL17RD|54756|interleukin 17 receptor D	0.0	
chr5	176882452	176882587	reg1028099.p1	5.644	+	NM_001174102 BC021240	-7190	+	BC024233 NM_001174101 NM_030567 TSC_hg19_v1_chr5_+_176873814 BC004261	-8700	+	TSC_hg19_v1_chr5_+_176853676 NM_001004105 NM_001004106 NM_002082 BC009277 L16862 BC017272 AF040751 AF040752 CU677893 CU679285 AB527614	-28761	+	NM_080881	17351	-	TSC_hg19_v1_chr5_-_176900626 U00802 D17530 BC000283 BC007281 BC007567 AK094125 AK225523 AK314645	18101	-	TSC_hg19_v1_chr5_-_176900653 NM_004395	18154	-	NM_001174102|PRR7|80758|proline rich 7 (synaptic)##BC021240|PRR7|80758|proline rich 7 (synaptic)##BC024233|PRR7|80758|proline rich 7 (synaptic)##NM_001174101|PRR7|80758|proline rich 7 (synaptic)##NM_030567|PRR7|80758|proline rich 7 (synaptic)##BC004261|PRR7|80758|proline rich 7 (synaptic)##NM_001004105|GRK6|2870|G protein-coupled receptor kinase 6##NM_001004106|GRK6|2870|G protein-coupled receptor kinase 6##NM_002082|GRK6|2870|G protein-coupled receptor kinase 6##BC009277|GRK6|2870|G protein-coupled receptor kinase 6##L16862|GRK6|2870|G protein-coupled receptor kinase 6##BC017272|GRK6|2870|G protein-coupled receptor kinase 6##AF040751|GRK6|2870|G protein-coupled receptor kinase 6##AF040752|GRK6|2870|G protein-coupled receptor kinase 6##NM_080881|DBN1|1627|drebrin 1##U00802|DBN1|1627|drebrin 1##D17530|DBN1|1627|drebrin 1##BC000283|DBN1|1627|drebrin 1##BC007281|DBN1|1627|drebrin 1##BC007567|DBN1|1627|drebrin 1##AK094125|DBN1|1627|drebrin 1##AK225523|DBN1|1627|drebrin 1##AK314645|DBN1|1627|drebrin 1##NM_004395|DBN1|1627|drebrin 1	0.911699	CTCF.p2:-3:0.912
chr11	68717900	68718001	reg1023091.p2	5.643	+	TSC_hg19_v1_chr11_+_68671384 AB208802 BC105088 BC105090 BC015666 BC062312 BC000290	-46548	+	TSC_hg19_v1_chr11_+_68671358 AK312565 L14754 BC025299 BC052278 BC080519	-46585	+	TSC_hg19_v1_chr11_+_68671350 BC041808	-46615	+	AB154410 AB463856 AY427820 NM_198923	30504	-	BC016964 AK098317 TSC_hg19_v1_chr11_-_68780715 AK293469 AK075492 AK122669 AK131068 AK075450 NM_001098515 NM_145015	62808	-	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	98400	+	AB208802|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC105088|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC105090|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC015666|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC062312|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC000290|IGHMBP2|3508|immunoglobulin mu binding protein 2##AK312565|IGHMBP2|3508|immunoglobulin mu binding protein 2##L14754|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC025299|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC052278|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC080519|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC041808|IGHMBP2|3508|immunoglobulin mu binding protein 2##AB154410|MRGPRD|116512|MAS-related GPR, member D##AY427820|MRGPRD|116512|MAS-related GPR, member D##NM_198923|MRGPRD|116512|MAS-related GPR, member D##BC016964|MRGPRF|116535|MAS-related GPR, member F##AK098317|MRGPRF|116535|MAS-related GPR, member F##AK293469|MRGPRF|116535|MAS-related GPR, member F##AK075492|MRGPRF|116535|MAS-related GPR, member F##AK122669|MRGPRF|116535|MAS-related GPR, member F##AK131068|MRGPRF|116535|MAS-related GPR, member F##AK075450|MRGPRF|116535|MAS-related GPR, member F##NM_001098515|MRGPRF|116535|MAS-related GPR, member F##NM_145015|MRGPRF|116535|MAS-related GPR, member F##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2	0.0	
chr1	190342979	190343100	reg1026267.p1	5.643	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-3544951	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-3693549	-	M33478 NM_002597	-3912812	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	103696	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	1784564	+	AY643711 NM_001039152	1943082	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.776281	CTCF.p2:-13:0.565	CTCF.p2:18:0.212
chr12	119474823	119474952	reg1026993.p1	5.642	+	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	-55540	+	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	-660485	+	TSC_hg19_v1_chr12_-_118810713 NM_016281	-664157	-	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	141792	+	BC040553 NM_178499	297629	+	NM_001136534 AK296289	556413	+	AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_016281|TAOK3|51347|TAO kinase 3##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60##NM_001136534|TMEM233|387890|transmembrane protein 233##AK296289|TMEM233|387890|transmembrane protein 233	0.950672	CTCF.p2:1:0.951
chr17	45791780	45791882	reg1023616.p1	5.642	+	TSC_hg19_v1_chr17_+_45773425 AB383985	-18382	+	TSC_hg19_v1_chr17_+_45773067 BC111418	-18792	+	AB018318 BC152407 BC167150 NM_014726	-19202	+	AF093098 NM_013351 AK223634 BC039739 AF241243 AB590854 TSC_hg19_v1_chr17_+_45810959	18953	+	BC065482 TSC_hg19_v1_chr17_-_45899130	107293	-	TSC_hg19_v1_chr17_-_45899154 AF323729 AK000267 BC028010 NM_145798 AK289523 AF392446	107354	-	BC111418|TBKBP1|9755|TBK1 binding protein 1##AB018318|TBKBP1|9755|TBK1 binding protein 1##BC152407|TBKBP1|9755|TBK1 binding protein 1##BC167150|TBKBP1|9755|TBK1 binding protein 1##NM_014726|TBKBP1|9755|TBK1 binding protein 1##AF093098|TBX21|30009|T-box 21##NM_013351|TBX21|30009|T-box 21##AK223634|TBX21|30009|T-box 21##BC039739|TBX21|30009|T-box 21##AF241243|TBX21|30009|T-box 21##BC065482|OSBPL7|114881|oxysterol binding protein-like 7##AF323729|OSBPL7|114881|oxysterol binding protein-like 7##BC028010|OSBPL7|114881|oxysterol binding protein-like 7##NM_145798|OSBPL7|114881|oxysterol binding protein-like 7##AK289523|OSBPL7|114881|oxysterol binding protein-like 7##AF392446|OSBPL7|114881|oxysterol binding protein-like 7	0.42718	CTCF.p2:-24:0.427
chr21	34294133	34294235	reg1025703.p1	5.642	+	BC069689 BC069709 BC069766 BC069779 AF231922 AK290983 DQ656042 NM_001162495 NM_001162496 NM_019596	-108187	-	AK096601 BC034794 TSC_hg19_v1_chr21_+_34144471 BC117397 BC117399	-149721	+	AY033903 AY033904 AY033905 AY033906 TSC_hg19_v1_chr21_-_34144044 AJ279080 AJ279081 AK309404 BC030539 BC084542 BC062992 NM_013329 NM_016631	-150110	-	TSC_hg19_v1_chr21_+_34398242 NM_005806 AK091462 BC047511 BC036245 BC034681 BC036275 AF221520	104067	+	TSC_hg19_v1_chr21_+_34442446 BC033290 NM_138983 AL834450 AB209791	148268	+	TSC_hg19_v1_chr21_+_34442554 AB463154 DQ896828 BC026989	148377	+	BC069689|C21orf62|56245|chromosome 21 open reading frame 62##BC069709|C21orf62|56245|chromosome 21 open reading frame 62##BC069766|C21orf62|56245|chromosome 21 open reading frame 62##BC069779|C21orf62|56245|chromosome 21 open reading frame 62##AF231922|C21orf62|56245|chromosome 21 open reading frame 62##AK290983|C21orf62|56245|chromosome 21 open reading frame 62##DQ656042|C21orf62|56245|chromosome 21 open reading frame 62##NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62##NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62##NM_019596|C21orf62|56245|chromosome 21 open reading frame 62##AK096601|C21orf49|54067|chromosome 21 open reading frame 49##BC034794|C21orf49|54067|chromosome 21 open reading frame 49##BC117397|C21orf49|54067|chromosome 21 open reading frame 49##BC117399|C21orf49|54067|chromosome 21 open reading frame 49##AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_005806|OLIG2|10215|oligodendrocyte lineage transcription factor 2##AK091462|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC047511|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC036245|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC034681|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC036275|OLIG2|10215|oligodendrocyte lineage transcription factor 2##AF221520|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC033290|OLIG1|116448|oligodendrocyte transcription factor 1##NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1##AL834450|OLIG1|116448|oligodendrocyte transcription factor 1##AB209791|OLIG1|116448|oligodendrocyte transcription factor 1##DQ896828|OLIG1|116448|oligodendrocyte transcription factor 1##BC026989|OLIG1|116448|oligodendrocyte transcription factor 1	0.999533	CTCF.p2:-10:1.000
chr2	209121295	209121404	reg1029798.p1	5.642	+	AF113917 TSC_hg19_v1_chr2_-_209119796 BC021046 AL136702 BC093020 AF020038 NM_005896 AK302105 AK312242	-1536	-	BC035737 NM_001099334	-66577	-	EF426311 NM_014617 BC114456	-93023	-	TSC_hg19_v1_chr2_+_209131009 AY457063 BC017736 BC032389 NM_001178000 NM_015040 NM_152671 BC125052 BC125053	9647	+	TSC_hg19_v1_chr2_+_209131083 AK127769	9734	+	AK294181 TSC_hg19_v1_chr2_+_209224677	103276	+	AF113917|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##BC021046|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AL136702|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##BC093020|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AF020038|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##NM_005896|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AK302105|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##AK312242|IDH1|3417|isocitrate dehydrogenase 1 (NADP+), soluble##BC035737|C2orf80|389073|chromosome 2 open reading frame 80##NM_001099334|C2orf80|389073|chromosome 2 open reading frame 80##EF426311|CRYGA|1418|crystallin, gamma A##NM_014617|CRYGA|1418|crystallin, gamma A##BC114456|CRYGA|1418|crystallin, gamma A##AY457063|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC017736|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC032389|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001178000|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_015040|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_152671|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC125052|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##BC125053|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##AK294181|PTH2R|5746|parathyroid hormone 2 receptor	0.999124	CTCF.p2:-6:0.999
chr4	40151805	40151985	reg1002561.p2	5.642	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-93363	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-172302	-	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	-172557	-	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	46746	+	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	185550	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	364689	-	AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47	0.0	
chr8	7564675	7564801	reg1027502.p1	5.642	+	NM_001136572	-124564	-	NM_001136572	-147505	-	DQ119826 NM_001037668 NM_001040705 BC137510 BC137513 AF540979 AY122467	-211321	+	NM_001164452 NM_001164456	8226	+	NM_001164449 NM_001164451	15874	+	NM_001164450	31170	+	NM_001136572|FAM90A7|441317|family with sequence similarity 90, member A7##NM_001136572|FAM90A7|441317|family with sequence similarity 90, member A7##DQ119826|DEFB107A|245910|defensin, beta 107A##NM_001037668|DEFB107A|245910|defensin, beta 107A##NM_001040705|DEFB107B|503614|defensin, beta 107B##BC137510|DEFB107A|245910|defensin, beta 107A##BC137513|DEFB107A|245910|defensin, beta 107A##AF540979|DEFB107A|245910|defensin, beta 107A##AY122467|DEFB107A|245910|defensin, beta 107A##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164449|FAM90A19|728753|family with sequence similarity 90, member A19##NM_001164451|FAM90A18|441326|family with sequence similarity 90, member A18##NM_001164450|FAM90A8|441324|family with sequence similarity 90, member A8	1.711518	CTCF.p2:-25:0.971	CTCF.p2:77:0.740
chr19	36370792	36370955	reg1026153.p1	5.641	+	TSC_hg19_v1_chr19_+_36359436 NM_001024807 NM_005166 BC013850 AK092376 BC012889 AK312292 BC032983 U48437 AB527091 CU680434 DQ891341 DQ894523	-11409	+	BC007312 NM_032123 NM_199179 NM_199180 AY358742 AL136654 AB593116	-23046	+	NM_004646	-27979	-	TSC_hg19_v1_chr19_-_36391448 AF385434 NM_139239	20626	-	AL050163 BC046348 NM_001007469 NM_014266 TSC_hg19_v1_chr19_+_36393430 BC065224 BC035931 AF072844 AF122904 AY359058 AF285447 AB590940	22564	+	TSC_hg19_v1_chr19_-_36399181 BT009851 CR450342 CR542202 AB590208 AY074782 CU679890 DQ891092 DQ894274 AJ010098	28277	-	NM_001024807|APLP1|333|amyloid beta (A4) precursor-like protein 1##NM_005166|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC013850|APLP1|333|amyloid beta (A4) precursor-like protein 1##AK092376|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC012889|APLP1|333|amyloid beta (A4) precursor-like protein 1##AK312292|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC032983|APLP1|333|amyloid beta (A4) precursor-like protein 1##U48437|APLP1|333|amyloid beta (A4) precursor-like protein 1##DQ891341|APLP1|333|amyloid beta (A4) precursor-like protein 1##DQ894523|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC007312|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##NM_032123|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##NM_199179|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##NM_199180|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##AY358742|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##AL136654|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##AB593116|KIRREL2|84063|kin of IRRE like 2 (Drosophila)##NM_004646|NPHS1|4868|nephrosis 1, congenital, Finnish type (nephrin)##AF385434|NFKBID|84807|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta##NM_139239|NFKBID|84807|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta##AL050163|HCST|10870|hematopoietic cell signal transducer##BC046348|HCST|10870|hematopoietic cell signal transducer##NM_001007469|HCST|10870|hematopoietic cell signal transducer##NM_014266|HCST|10870|hematopoietic cell signal transducer##BC065224|HCST|10870|hematopoietic cell signal transducer##BC035931|HCST|10870|hematopoietic cell signal transducer##AF072844|HCST|10870|hematopoietic cell signal transducer##AF122904|HCST|10870|hematopoietic cell signal transducer##AY359058|HCST|10870|hematopoietic cell signal transducer##AF285447|HCST|10870|hematopoietic cell signal transducer##BT009851|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR450342|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR542202|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AY074782|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ891092|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ894274|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AJ010098|TYROBP|7305|TYRO protein tyrosine kinase binding protein	0.0	
chr6	43354369	43354528	reg1025108.p2	5.641	+	TSC_hg19_v1_chr6_-_43337215 BC098434 AF090114 NM_014345 BC030687	-17206	-	AB463553 AY555741 AY555742 AY555743 AY555744 NM_206922	-77919	-	TSC_hg19_v1_chr6_+_43266009 AK290806 AK309570 AK314822 BC033805 AK290796 BC017963 DQ893614 DQ896844 AF210455 AY050498	-88396	+	TSC_hg19_v1_chr6_+_43395310 AK000002 NM_001198934	40865	+	AY032599 NM_033450	45040	+	AY358126 NM_023932 BC110320	68824	-	BC098434|ZNF318|24149|zinc finger protein 318##AF090114|ZNF318|24149|zinc finger protein 318##NM_014345|ZNF318|24149|zinc finger protein 318##BC030687|ZNF318|24149|zinc finger protein 318##AY555741|CRIP3|401262|cysteine-rich protein 3##AY555742|CRIP3|401262|cysteine-rich protein 3##AY555743|CRIP3|401262|cysteine-rich protein 3##AY555744|CRIP3|401262|cysteine-rich protein 3##NM_206922|CRIP3|401262|cysteine-rich protein 3##AK290806|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK309570|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK314822|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC033805|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290796|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC017963|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ893614|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ896844|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF210455|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AY050498|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK000002|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_001198934|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##AY032599|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_033450|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##AY358126|DLK2|65989|delta-like 2 homolog (Drosophila)##NM_023932|DLK2|65989|delta-like 2 homolog (Drosophila)##BC110320|DLK2|65989|delta-like 2 homolog (Drosophila)	0.358055	CTCF.p2:-16:0.358
chr6	5004292	5004418	reg1025798.p2	5.641	+	TSC_hg19_v1_chr6_-_5004262 BC017871 NM_006638	-85	-	TSC_hg19_v1_chr6_+_5004043 AK094934	-329	+	BC043397 NM_001143971	-114130	+	TSC_hg19_v1_chr6_+_5030223 BC042032 BC133670	25878	+	NM_001145115	81364	+	AF088060 EU831799 EU831876 TSC_hg19_v1_chr6_-_5260976 AK309661 AK291158 BC067762 AF170070 AF285118 BC009552	256642	-	BC017871|RPP40|10799|ribonuclease P/MRP 40kDa subunit##NM_006638|RPP40|10799|ribonuclease P/MRP 40kDa subunit##AK094934|LOC285778|285778|uncharacterized LOC285778##BC043397|CDYL|9425|chromodomain protein, Y-like##NM_001143971|CDYL|9425|chromodomain protein, Y-like##BC042032|LOC100129461|100129461|uncharacterized LOC100129461##BC133670|LOC100129461|100129461|uncharacterized LOC100129461##NM_001145115|PPP1R3G|648791|protein phosphatase 1, regulatory subunit 3G##AF088060|LYRM4|57128|LYR motif containing 4##EU831799|LYRM4|57128|LYR motif containing 4##EU831876|LYRM4|57128|LYR motif containing 4##AK309661|LYRM4|57128|LYR motif containing 4##AK291158|LYRM4|57128|LYR motif containing 4##BC067762|LYRM4|57128|LYR motif containing 4##AF170070|LYRM4|57128|LYR motif containing 4##AF285118|LYRM4|57128|LYR motif containing 4##BC009552|LYRM4|57128|LYR motif containing 4	0.044926	
chr7	36167140	36167225	reg1022141.p2	5.641	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	-326330	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	-326349	+	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	-326472	+	TSC_hg19_v1_chr7_+_36192789 NM_030636	25623	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	25701	+	TSC_hg19_v1_chr7_+_36193025 AB051493	25873	+	DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##NM_030636|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1	0.0	
chr9	130965498	130965620	reg1019202.p1	5.641	+	TSC_hg19_v1_chr9_-_130953862 AB030835 BC021163 AK027287 AK303288 AK303636 AK292713 AK316393 NM_001131016 NM_001131017 NM_001131018	-11729	-	TSC_hg19_v1_chr9_+_130922543 NM_024112 AK315753 BC001857 BC008887 AK311245	-42981	+	AK301694 AK316217 NM_005564 TSC_hg19_v1_chr9_+_130911731 AK307311 BC033089 X83006 AB591011 CR542092 EU644752 S75256	-53762	+	TSC_hg19_v1_chr9_+_130965657 AK295101 AK316235 BC050279 NM_001005336 NM_004408	77	+	AK296326 TSC_hg19_v1_chr9_+_130965667	107	+	TSC_hg19_v1_chr9_+_130965688 L07807 BC063850 AK225179	159	+	AB030835|CIZ1|25792|CDKN1A interacting zinc finger protein 1##BC021163|CIZ1|25792|CDKN1A interacting zinc finger protein 1##AK027287|CIZ1|25792|CDKN1A interacting zinc finger protein 1##AK303288|CIZ1|25792|CDKN1A interacting zinc finger protein 1##AK303636|CIZ1|25792|CDKN1A interacting zinc finger protein 1##AK292713|CIZ1|25792|CDKN1A interacting zinc finger protein 1##AK316393|CIZ1|25792|CDKN1A interacting zinc finger protein 1##NM_001131016|CIZ1|25792|CDKN1A interacting zinc finger protein 1##NM_001131017|CIZ1|25792|CDKN1A interacting zinc finger protein 1##NM_001131018|CIZ1|25792|CDKN1A interacting zinc finger protein 1##NM_024112|C9orf16|79095|chromosome 9 open reading frame 16##AK315753|C9orf16|79095|chromosome 9 open reading frame 16##BC001857|C9orf16|79095|chromosome 9 open reading frame 16##BC008887|C9orf16|79095|chromosome 9 open reading frame 16##AK301694|LCN2|3934|lipocalin 2##AK316217|LCN2|3934|lipocalin 2##NM_005564|LCN2|3934|lipocalin 2##BC033089|LCN2|3934|lipocalin 2##X83006|LCN2|3934|lipocalin 2##CR542092|LCN2|3934|lipocalin 2##EU644752|LCN2|3934|lipocalin 2##S75256|LCN2|3934|lipocalin 2##AK295101|DNM1|1759|dynamin 1##AK316235|DNM1|1759|dynamin 1##BC050279|DNM1|1759|dynamin 1##NM_001005336|DNM1|1759|dynamin 1##NM_004408|DNM1|1759|dynamin 1##AK296326|DNM1|1759|dynamin 1##L07807|DNM1|1759|dynamin 1##BC063850|DNM1|1759|dynamin 1##AK225179|DNM1|1759|dynamin 1	0.646825	CTCF.p2:36:0.647
chr10	98877283	98877384	reg1026461.p1	5.640	+	AK126886 BC024315 NM_015652 CU692918	-136266	+	TSC_hg19_v1_chr10_+_98592758 NM_032440 AL834245 AB058698	-284605	+	TSC_hg19_v1_chr10_-_98592186 AB593180	-285133	-	AY029183 AB383997 TSC_hg19_v1_chr10_-_98945570	68141	-	TSC_hg19_v1_chr10_-_98945606 BC146851	68262	-	AB017167 TSC_hg19_v1_chr10_-_98945702 BC028105 AB011537 BC146761 NM_003061 BC139909	68352	-	AK126886|C10orf12|26148|chromosome 10 open reading frame 12##BC024315|C10orf12|26148|chromosome 10 open reading frame 12##NM_015652|C10orf12|26148|chromosome 10 open reading frame 12##NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor##AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor##AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor##AY029183|SLIT1|6585|slit homolog 1 (Drosophila)##BC146851|SLIT1|6585|slit homolog 1 (Drosophila)##AB017167|SLIT1|6585|slit homolog 1 (Drosophila)##BC028105|SLIT1|6585|slit homolog 1 (Drosophila)##AB011537|SLIT1|6585|slit homolog 1 (Drosophila)##BC146761|SLIT1|6585|slit homolog 1 (Drosophila)##NM_003061|SLIT1|6585|slit homolog 1 (Drosophila)##BC139909|SLIT1|6585|slit homolog 1 (Drosophila)	0.996593	CTCF.p2:-2:0.997
chr12	68759279	68759460	reg1023147.p2	5.640	+	TSC_hg19_v1_chr12_-_68726142 BC010622 AK297311 BC034945 BC022042 AF267851 BC028355 AK314461 NM_001205028 NM_001205029 NM_017440 NM_020128	-33263	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	-112065	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	-139817	-	TSC_hg19_v1_chr12_+_69004678 NM_001010942 NM_001251917 NM_001251918 NM_001251921 NM_001251922 NM_015646	245277	+	TSC_hg19_v1_chr12_+_69004704 AK312371 BC078173 AK316447 AJ420497 AK298818 AK316543	245326	+	AK301401 AK301428 TSC_hg19_v1_chr12_+_69004708	245339	+	BC010622|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK297311|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC034945|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC022042|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AF267851|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC028355|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK314461|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205028|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205029|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_017440|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_020128|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##NM_001010942|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251917|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251918|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251921|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251922|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_015646|RAP1B|5908|RAP1B, member of RAS oncogene family##AK312371|RAP1B|5908|RAP1B, member of RAS oncogene family##BC078173|RAP1B|5908|RAP1B, member of RAS oncogene family##AK316447|RAP1B|5908|RAP1B, member of RAS oncogene family##AJ420497|RAP1B|5908|RAP1B, member of RAS oncogene family##AK298818|RAP1B|5908|RAP1B, member of RAS oncogene family##AK316543|RAP1B|5908|RAP1B, member of RAS oncogene family##AK301401|RAP1B|5908|RAP1B, member of RAS oncogene family##AK301428|RAP1B|5908|RAP1B, member of RAS oncogene family	0.0	
chr15	33285632	33285747	reg1024012.p1	5.640	+	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-274523	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-275432	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	-351775	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	74546	-	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	317480	+	TSC_hg19_v1_chr15_-_34212524 BC037796	926869	-	AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3	0.0	
chr22	44392209	44392390	reg1021839.p2	5.640	+	TSC_hg19_v1_chr22_+_44351384 AY189688 AF151809 BC007830 AK222657 BC015200 AK297770 AK312773 CR456483 CU013033 CU013321 AB463278 DQ893124 DQ896401 CU677235	-40905	+	TSC_hg19_v1_chr22_+_44351321 AK001087	-40977	+	NM_015380 TSC_hg19_v1_chr22_+_44351285 BC011681	-41019	+	AF303887 NM_001003828	2791	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	27900	+	AK308443 NM_001243386	29884	+	AY189688|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AF151809|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC007830|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK222657|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC015200|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK297770|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK312773|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CR456483|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013033|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013321|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ893124|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ896401|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK001087|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##NM_015380|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC011681|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AF303887|PARVB|29780|parvin, beta##NM_001003828|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta	0.0	
chr2	86221179	86221359	reg1022842.p1	5.640	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-105183	-	AY152815 NM_001042437	-126477	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-240264	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	111714	-	NM_015425	112008	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	112072	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.0	
chr6_qbl_hap6	3660776	3660886	reg1021936.p1	5.640	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.943967	CTCF.p2:-1:0.944
chr13	62694013	62694113	reg1016948.p1	5.639	+	AK289924 NM_022843	-704409	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-704810	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-1722584	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	5110441	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	7988478	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	9746196	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.32162	CTCF.p2:0:0.322
chr2	237411883	237412038	reg1024813.p1	5.639	+	NM_212556 BX647589	-238966	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-335328	-	AK311262 TSC_hg19_v1_chr2_-_237076045	-335946	-	BC043504 NM_024726 AK294105 BC028699	4172	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	66468	+	BC036499 NM_006710 NM_198189	582058	+	NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	0.937313	CTCF.p2:-39:0.937
chr3	43544682	43544825	reg1025729.p1	5.639	+	TSC_hg19_v1_chr3_+_43328077 AK291360 NM_001100594 NM_017719 BC071567 AK295187 CR749621 AK314376	-216684	+	TSC_hg19_v1_chr3_-_43147568 BC060861 NM_032806	-397202	-	NM_001129908 AK311059 AK311069 AK091001 AX746726	-523960	+	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	118685	-	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	118760	-	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	187668	+	AK291360|SNRK|54861|SNF related kinase##NM_001100594|SNRK|54861|SNF related kinase##NM_017719|SNRK|54861|SNF related kinase##BC071567|SNRK|54861|SNF related kinase##AK295187|SNRK|54861|SNF related kinase##CR749621|SNRK|54861|SNF related kinase##AK314376|SNRK|54861|SNF related kinase##BC060861|C3orf39|84892|chromosome 3 open reading frame 39##NM_032806|C3orf39|84892|chromosome 3 open reading frame 39##NM_001129908|FAM198A|729085|family with sequence similarity 198, member A##AK311059|FAM198A|729085|family with sequence similarity 198, member A##AK311069|FAM198A|729085|family with sequence similarity 198, member A##AK091001|FAM198A|729085|family with sequence similarity 198, member A##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5	0.924878	CTCF.p2:8:0.925
chr11	128756439	128756546	reg1025575.p1	5.638	+	U12544 U12545 AK308032 U12543 U03884 AK308033 BC063109 NM_153764 NM_153765 NM_153766 NM_153767 U12542	-19293	-	BC136360 BC136361 BC074752 NM_000220 U12541 AK314267 AK290797	-44114	-	TSC_hg19_v1_chr11_+_128564132 AB385119 AY029368 CU674822 DQ892582 DQ896858	-192350	+	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	4848	+	DQ891644 DQ894833 TSC_hg19_v1_chr11_-_128774571	18037	-	BC025756 NM_145013	19099	-	U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AY029368|FLI1|2313|Friend leukemia virus integration 1##DQ892582|FLI1|2313|Friend leukemia virus integration 1##DQ896858|FLI1|2313|Friend leukemia virus integration 1##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##DQ891644|C11orf45|219833|chromosome 11 open reading frame 45##DQ894833|C11orf45|219833|chromosome 11 open reading frame 45##BC025756|C11orf45|219833|chromosome 11 open reading frame 45##NM_145013|C11orf45|219833|chromosome 11 open reading frame 45	0.10796	
chr18	10560299	10560479	reg1000274.p1	5.638	+	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-34292	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-34333	+	TSC_hg19_v1_chr18_+_10526033 AK294038 U78107 AK314495	-34361	+	NM_022068	588371	-	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	1128823	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	1191126	+	CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK294038|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##U78107|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK314495|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.0	
chr22	19287642	19287758	reg1026064.p2	5.638	+	BC143977 BC143979 TSC_hg19_v1_chr22_-_19279243 X95486 AK302506 U60802 U60803 NM_001835 NM_007098	-8484	-	TSC_hg19_v1_chr22_-_19166299 NM_005984	-121397	-	TSC_hg19_v1_chr22_-_19166279 AK292313 L75823	-121420	-	AB384712 CU013101 CU013389 CR456503 X81844 TSC_hg19_v1_chr22_-_19419085	131350	-	TSC_hg19_v1_chr22_-_19419214 BC039835	131495	-	TSC_hg19_v1_chr22_-_19419257 NM_003325 X75296 X89887 BC032721	131547	-	BC143977|CLTCL1|8218|clathrin, heavy chain-like 1##BC143979|CLTCL1|8218|clathrin, heavy chain-like 1##X95486|CLTCL1|8218|clathrin, heavy chain-like 1##AK302506|CLTCL1|8218|clathrin, heavy chain-like 1##U60802|CLTCL1|8218|clathrin, heavy chain-like 1##U60803|CLTCL1|8218|clathrin, heavy chain-like 1##NM_001835|CLTCL1|8218|clathrin, heavy chain-like 1##NM_007098|CLTCL1|8218|clathrin, heavy chain-like 1##NM_005984|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1##AK292313|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1##L75823|SLC25A1|6576|solute carrier family 25 (mitochondrial carrier; citrate transporter), member 1##CU013101|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##CU013389|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##CR456503|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##X81844|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##BC039835|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##NM_003325|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##X75296|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##X89887|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##BC032721|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)	0.0	
chr8	80964847	80964963	reg1023531.p2	5.638	+	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	-22403	-	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	-284908	-	AK292737 TSC_hg19_v1_chr8_+_80523376 BC006302 S82024 AB528346 BT020034 CR456833 DQ892719 DQ895968 CU675343	-441502	+	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	28124	-	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	118865	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	433579	+	AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK292737|STMN2|11075|stathmin-like 2##BC006302|STMN2|11075|stathmin-like 2##S82024|STMN2|11075|stathmin-like 2##BT020034|STMN2|11075|stathmin-like 2##CR456833|STMN2|11075|stathmin-like 2##DQ892719|STMN2|11075|stathmin-like 2##DQ895968|STMN2|11075|stathmin-like 2##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10	0.0	
chrX	122911759	122911854	reg1020967.p1	5.638	+	TSC_hg19_v1_chrX_-_122866897 NM_001081550	-44909	-	TSC_hg19_v1_chrX_-_122866885 AK001758	-44923	-	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	-593566	+	TSC_hg19_v1_chrX_+_122993844 AK313883 NM_001204401 NM_001167 AK309704 U32974 BC032729	82136	+	TSC_hg19_v1_chrX_+_123094397 NM_001042749 AK098737 BX640970 AK298633 AK313559	182718	+	NM_001042750 NM_001042751 NM_006603 TSC_hg19_v1_chrX_+_123095573 AL831939 BX641002 CR749433 BX641003	183767	+	NM_001081550|THOC2|57187|THO complex 2##AK001758|THOC2|57187|THO complex 2##NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##AK313883|XIAP|331|X-linked inhibitor of apoptosis##NM_001204401|XIAP|331|X-linked inhibitor of apoptosis##NM_001167|XIAP|331|X-linked inhibitor of apoptosis##AK309704|XIAP|331|X-linked inhibitor of apoptosis##U32974|XIAP|331|X-linked inhibitor of apoptosis##BC032729|XIAP|331|X-linked inhibitor of apoptosis##NM_001042749|STAG2|10735|stromal antigen 2##AK098737|STAG2|10735|stromal antigen 2##BX640970|STAG2|10735|stromal antigen 2##AK298633|STAG2|10735|stromal antigen 2##AK313559|STAG2|10735|stromal antigen 2##NM_001042750|STAG2|10735|stromal antigen 2##NM_001042751|STAG2|10735|stromal antigen 2##NM_006603|STAG2|10735|stromal antigen 2##AL831939|STAG2|10735|stromal antigen 2##BX641002|STAG2|10735|stromal antigen 2##CR749433|STAG2|10735|stromal antigen 2##BX641003|STAG2|10735|stromal antigen 2	0.888292	CTCF.p2:0:0.683	CTCF.p2:-28:0.205
chr10	14135843	14135960	reg1023320.p2	5.637	+	TSC_hg19_v1_chr10_-_14050453 AK001072	-85409	-	TSC_hg19_v1_chr10_-_13749648 AK057828	-386212	-	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-506914	+	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	236949	-	TSC_hg19_v1_chr10_-_14646259 BC064407	510416	-	TSC_hg19_v1_chr10_-_14646423 BC072452	510528	-	AK001072|FRMD4A|55691|FERM domain containing 4A##AK057828|FRMD4A|55691|FERM domain containing 4A##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B	0.83599	CTCF.p2:2:0.836
chr11	35297126	35297212	reg1029407.p2	5.637	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	-18344	-	TSC_hg19_v1_chr11_+_35198199 AK129808	-98957	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-136309	+	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	143542	-	TSC_hg19_v1_chr11_-_35441106 NM_004171	143934	-	S83375 U01824 TSC_hg19_v1_chr11_-_35441572 AK122843 NM_001195728 NM_001252652	144386	-	CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK129808|CD44|960|CD44 molecule (Indian blood group)##AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.071242	
chr18	12271779	12271887	reg1019637.p1	5.637	+	NM_001279 AK122762 AF041378 AY364639	-17484	+	TSC_hg19_v1_chr18_+_11981575 BC017176 AF200432 BT007061	-290223	+	TSC_hg19_v1_chr18_+_11981502 BC031560	-290334	+	TSC_hg19_v1_chr18_+_12308239 AK001295 AK092677 AK311364	36405	+	TSC_hg19_v1_chr18_+_12308246 AK022340 AK098440 AK304616 BC002654 NM_032525 AK298196 BC039717 AB590145 DQ893486 DQ896394	36432	+	TSC_hg19_v1_chr18_-_12377199 Y18314 BC065016	105355	-	NM_001279|CIDEA|1149|cell death-inducing DFFA-like effector a##AK122762|CIDEA|1149|cell death-inducing DFFA-like effector a##AF041378|CIDEA|1149|cell death-inducing DFFA-like effector a##AY364639|CIDEA|1149|cell death-inducing DFFA-like effector a##BC017176|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##AF200432|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BT007061|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##BC031560|IMPA2|3613|inositol(myo)-1(or 4)-monophosphatase 2##AK001295|TUBB6|84617|tubulin, beta 6 class V##AK092677|TUBB6|84617|tubulin, beta 6 class V##AK311364|TUBB6|84617|tubulin, beta 6 class V##AK022340|TUBB6|84617|tubulin, beta 6 class V##AK098440|TUBB6|84617|tubulin, beta 6 class V##AK304616|TUBB6|84617|tubulin, beta 6 class V##BC002654|TUBB6|84617|tubulin, beta 6 class V##NM_032525|TUBB6|84617|tubulin, beta 6 class V##AK298196|TUBB6|84617|tubulin, beta 6 class V##DQ893486|TUBB6|84617|tubulin, beta 6 class V##DQ896394|TUBB6|84617|tubulin, beta 6 class V##Y18314|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##BC065016|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)	0.082217	
chr1	10927315	10927433	reg1021964.p1	5.636	+	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	-70669	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	-172823	-	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-392363	+	NM_001170754	114719	-	NM_007375 TSC_hg19_v1_chr1_+_11072715 AK299454 AK312416 BC001487 BC095435 BC071657 AL050265 AK222754 AK295920	145336	+	Y18282 TSC_hg19_v1_chr1_-_11107270 Y18283 X98400 Y09926 BC052299 BC067359 BC080556 Y18281 Y18284 AB008047	179845	-	DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127##NM_007375|TARDBP|23435|TAR DNA binding protein##AK299454|TARDBP|23435|TAR DNA binding protein##AK312416|TARDBP|23435|TAR DNA binding protein##BC001487|TARDBP|23435|TAR DNA binding protein##BC095435|TARDBP|23435|TAR DNA binding protein##BC071657|TARDBP|23435|TAR DNA binding protein##AL050265|TARDBP|23435|TAR DNA binding protein##AK222754|TARDBP|23435|TAR DNA binding protein##AK295920|TARDBP|23435|TAR DNA binding protein##Y18282|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18283|MASP2|10747|mannan-binding lectin serine peptidase 2##X98400|MASP2|10747|mannan-binding lectin serine peptidase 2##Y09926|MASP2|10747|mannan-binding lectin serine peptidase 2##BC052299|MASP2|10747|mannan-binding lectin serine peptidase 2##BC067359|MASP2|10747|mannan-binding lectin serine peptidase 2##BC080556|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18281|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18284|MASP2|10747|mannan-binding lectin serine peptidase 2##AB008047|MASP2|10747|mannan-binding lectin serine peptidase 2	0.864239	CTCF.p2:-23:0.864
chr16	17288191	17288300	reg1024111.p2	5.636	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-961715	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-961757	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-961763	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	276560	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1285146	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1509851	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.999359	CTCF.p2:-3:0.999
chr2	238030975	238031095	reg1024567.p1	5.636	+	TSC_hg19_v1_chr2_+_237994551 AK289891 BC067774 AK308962 U51205 BC003090 BC080617 CR456994 CU678366	-36458	+	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	-36515	+	TSC_hg19_v1_chr2_-_237994424 AK056246	-36598	-	TSC_hg19_v1_chr2_-_238322786 AK092021 AX747317 AK304870 BC144595 BC150625 BC171790	291750	-	AK308451 TSC_hg19_v1_chr2_-_238322808 BX647500	291774	-	AK303290 TSC_hg19_v1_chr2_-_238322814	291779	-	AK289891|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK308962|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##U51205|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC003090|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC080617|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##CR456994|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK092021|COL6A3|1293|collagen, type VI, alpha 3##AK304870|COL6A3|1293|collagen, type VI, alpha 3##BC144595|COL6A3|1293|collagen, type VI, alpha 3##BC150625|COL6A3|1293|collagen, type VI, alpha 3##BC171790|COL6A3|1293|collagen, type VI, alpha 3##AK308451|COL6A3|1293|collagen, type VI, alpha 3##BX647500|COL6A3|1293|collagen, type VI, alpha 3##AK303290|COL6A3|1293|collagen, type VI, alpha 3	0.618911	CTCF.p2:4:0.603
chr2	69240110	69240222	reg1024468.p2	5.636	+	AB039886 AJ966789 NM_019617 AB590637 AY139184 AK098489 AY456961 BC059778 AY359050	-38424	+	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	-60110	-	BC069080 BC101734 BC105063 AF101441 NM_014482	-141591	-	TSC_hg19_v1_chr2_+_69240310 NM_018153 NM_032208 NM_053034 AF279145 AK001463 AY928974 AY928975 AY928976 AY928977 AK223273 BC012074 AK309553 AF421380 AK292113 CU680200 EU832615 EU832687	217	+	TSC_hg19_v1_chr2_-_69614353 M90516 BC045641 NM_001244710 NM_002056	374239	-	AJ132584 AF132967 AB528729 HQ258750 TSC_hg19_v1_chr2_-_69664568 AK300700 AK308567	424407	-	AB039886|GKN1|56287|gastrokine 1##AJ966789|GKN1|56287|gastrokine 1##NM_019617|GKN1|56287|gastrokine 1##AY139184|GKN1|56287|gastrokine 1##AK098489|GKN1|56287|gastrokine 1##AY456961|GKN1|56287|gastrokine 1##BC059778|GKN1|56287|gastrokine 1##AY359050|GKN1|56287|gastrokine 1##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2##BC069080|BMP10|27302|bone morphogenetic protein 10##BC101734|BMP10|27302|bone morphogenetic protein 10##BC105063|BMP10|27302|bone morphogenetic protein 10##AF101441|BMP10|27302|bone morphogenetic protein 10##NM_014482|BMP10|27302|bone morphogenetic protein 10##NM_018153|ANTXR1|84168|anthrax toxin receptor 1##NM_032208|ANTXR1|84168|anthrax toxin receptor 1##NM_053034|ANTXR1|84168|anthrax toxin receptor 1##AF279145|ANTXR1|84168|anthrax toxin receptor 1##AK001463|ANTXR1|84168|anthrax toxin receptor 1##AK223273|ANTXR1|84168|anthrax toxin receptor 1##BC012074|ANTXR1|84168|anthrax toxin receptor 1##AK309553|ANTXR1|84168|anthrax toxin receptor 1##AF421380|ANTXR1|84168|anthrax toxin receptor 1##AK292113|ANTXR1|84168|anthrax toxin receptor 1##EU832615|ANTXR1|84168|anthrax toxin receptor 1##EU832687|ANTXR1|84168|anthrax toxin receptor 1##M90516|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##BC045641|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_001244710|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_002056|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##AJ132584|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AF132967|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##HQ258750|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK300700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK308567|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	0.99885	CTCF.p2:-4:0.999
chr1	118055471	118055573	reg1022985.p1	5.635	+	TSC_hg19_v1_chr1_+_117910083 BC052954 AK307842 NM_006699 BC063300	-145429	+	AY280972 DQ103757 AB590614 BC074729 AY346100 AY358352 AK026071 AK225413 AK310812 AY442303 BC065717 BX648021 DQ836392 NM_001253850 NM_024626	-301994	-	AK303466 NM_001253849	-309065	-	TSC_hg19_v1_chr1_+_118148542 NM_017709	93064	+	TSC_hg19_v1_chr1_+_118148669 AK000209 BC036516 BC131726	93157	+	TSC_hg19_v1_chr1_-_118472186 BC013132	416660	-	BC052954|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##AK307842|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##NM_006699|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC063300|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##AY280972|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ103757|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC074729|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY346100|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY358352|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK026071|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK225413|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK310812|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY442303|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC065717|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BX648021|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ836392|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253850|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_024626|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK303466|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253849|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_017709|FAM46C|54855|family with sequence similarity 46, member C##AK000209|FAM46C|54855|family with sequence similarity 46, member C##BC036516|FAM46C|54855|family with sequence similarity 46, member C##BC131726|FAM46C|54855|family with sequence similarity 46, member C##BC013132|GDAP2|54834|ganglioside induced differentiation associated protein 2	0.417507	CTCF.p2:-6:0.418
chr17	7199984	7200155	reg1000310.p2	5.635	+	TSC_hg19_v1_chr17_-_7197897 AB208818	-2142	-	TSC_hg19_v1_chr17_-_7197866 AF096834 NM_015982	-2190	-	TSC_hg19_v1_chr17_-_7197854 BC033800 BC047760 AK315035	-2234	-	AY129319 NM_001143760	10248	+	TSC_hg19_v1_chr17_+_7210855 NM_001970 AY129320	10793	+	TSC_hg19_v1_chr17_+_7210946 BC000751 BC001832 BC107779 BC030160 BC080196 AK292615 AK222585 BC085015	10925	+	AB208818|YBX2|51087|Y box binding protein 2##AF096834|YBX2|51087|Y box binding protein 2##NM_015982|YBX2|51087|Y box binding protein 2##BC033800|YBX2|51087|Y box binding protein 2##BC047760|YBX2|51087|Y box binding protein 2##AK315035|YBX2|51087|Y box binding protein 2##AY129319|EIF5A|1984|eukaryotic translation initiation factor 5A##NM_001143760|EIF5A|1984|eukaryotic translation initiation factor 5A##NM_001970|EIF5A|1984|eukaryotic translation initiation factor 5A##AY129320|EIF5A|1984|eukaryotic translation initiation factor 5A##BC000751|EIF5A|1984|eukaryotic translation initiation factor 5A##BC001832|EIF5A|1984|eukaryotic translation initiation factor 5A##BC107779|EIF5A|1984|eukaryotic translation initiation factor 5A##BC030160|EIF5A|1984|eukaryotic translation initiation factor 5A##BC080196|EIF5A|1984|eukaryotic translation initiation factor 5A##AK292615|EIF5A|1984|eukaryotic translation initiation factor 5A##AK222585|EIF5A|1984|eukaryotic translation initiation factor 5A##BC085015|EIF5A|1984|eukaryotic translation initiation factor 5A	0.0	
chr15	40322584	40322674	reg1021907.p1	5.634	+	TSC_hg19_v1_chr15_+_40294764 AK074361	-27833	+	TSC_hg19_v1_chr15_+_40226315 BC078179 NM_001013703 BC061591 AB527135 CU687326	-96289	+	TSC_hg19_v1_chr15_-_40213138 D38449 NM_007223	-109502	-	AB451391 CU690086 TSC_hg19_v1_chr15_-_40331370 X73459 BC071716 U07857 BC100031 BC035495 BC051006 AB061546 NM_003134	8723	-	TSC_hg19_v1_chr15_+_40331506 AK127696	8849	+	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	75657	-	AK074361|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##BC078179|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##NM_001013703|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##BC061591|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##D38449|GPR176|11245|G protein-coupled receptor 176##NM_007223|GPR176|11245|G protein-coupled receptor 176##AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AK127696|LOC100131089|100131089|uncharacterized LOC100131089##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor	0.075955	
chr6	131489056	131489168	reg1025563.p1	5.634	+	NM_016377 TSC_hg19_v1_chr6_+_131456855 AK300587	-32265	+	TSC_hg19_v1_chr6_-_131384387 AK295124 NM_001135554 NM_001135555 NM_001199388 NM_001431	-104688	-	AF027299 TSC_hg19_v1_chr6_-_131384381 BC034718 AB209522	-104761	-	NM_004842 NM_138633	82186	+	NM_000045 NM_001244438 AY074488 BC005321 TSC_hg19_v1_chr6_+_131894365 M14502 BC020653 CU676606 AB590280 DQ892039 DQ895230 BT006741	405270	+	AB385438 AF135022 AM393572 EU832308 EU832392 EU392526 EU392528 EU392529 EU392530 EU392531 AK315030 AF105332 EU392520 EU392522 EU392527 EU392532 BC060759 TSC_hg19_v1_chr6_-_131949372 AF104255 AL136776 AB033042 BC007088 NM_004830 NM_015979	460175	-	NM_016377|AKAP7|9465|A kinase (PRKA) anchor protein 7##AK300587|AKAP7|9465|A kinase (PRKA) anchor protein 7##AK295124|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001135554|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001135555|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199388|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001431|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AF027299|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##BC034718|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AB209522|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_000045|ARG1|383|arginase, liver##NM_001244438|ARG1|383|arginase, liver##AY074488|ARG1|383|arginase, liver##BC005321|ARG1|383|arginase, liver##M14502|ARG1|383|arginase, liver##BC020653|ARG1|383|arginase, liver##DQ892039|ARG1|383|arginase, liver##DQ895230|ARG1|383|arginase, liver##BT006741|ARG1|383|arginase, liver##AF135022|MED23|9439|mediator complex subunit 23##AM393572|MED23|9439|mediator complex subunit 23##EU832308|MED23|9439|mediator complex subunit 23##EU832392|MED23|9439|mediator complex subunit 23##EU392526|MED23|9439|mediator complex subunit 23##EU392528|MED23|9439|mediator complex subunit 23##EU392529|MED23|9439|mediator complex subunit 23##EU392530|MED23|9439|mediator complex subunit 23##EU392531|MED23|9439|mediator complex subunit 23##AK315030|MED23|9439|mediator complex subunit 23##AF105332|MED23|9439|mediator complex subunit 23##EU392520|MED23|9439|mediator complex subunit 23##EU392522|MED23|9439|mediator complex subunit 23##EU392527|MED23|9439|mediator complex subunit 23##EU392532|MED23|9439|mediator complex subunit 23##BC060759|MED23|9439|mediator complex subunit 23##AF104255|MED23|9439|mediator complex subunit 23##AL136776|MED23|9439|mediator complex subunit 23##AB033042|MED23|9439|mediator complex subunit 23##BC007088|MED23|9439|mediator complex subunit 23##NM_004830|MED23|9439|mediator complex subunit 23##NM_015979|MED23|9439|mediator complex subunit 23	0.927466	CTCF.p2:14:0.927
chrX	13709077	13709200	reg1025931.p1	5.634	+	TSC_hg19_v1_chrX_+_13707248 AK290505 BC017265	-1845	+	TSC_hg19_v1_chrX_+_13707246 NM_001195328 NM_004251	-1897	+	AK291271 AK315599 NM_152634 AK294465	-37872	+	AK310542 TSC_hg19_v1_chrX_-_13752740 AK313736 BC016915 BC052618 NM_001011658 NM_001128835 NM_014563	43570	-	TSC_hg19_v1_chrX_+_13752866 NM_003611 AK290354 AK289677 BC012324 BC030787 BC062432 Y15164 Y16355	43696	+	AK225847 BC042830 TSC_hg19_v1_chrX_+_13752900	43762	+	AK290505|RAB9A|9367|RAB9A, member RAS oncogene family##BC017265|RAB9A|9367|RAB9A, member RAS oncogene family##NM_001195328|RAB9A|9367|RAB9A, member RAS oncogene family##NM_004251|RAB9A|9367|RAB9A, member RAS oncogene family##AK291271|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK315599|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##NM_152634|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK294465|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK310542|TRAPPC2|6399|trafficking protein particle complex 2##AK313736|TRAPPC2|6399|trafficking protein particle complex 2##BC016915|TRAPPC2|6399|trafficking protein particle complex 2##BC052618|TRAPPC2|6399|trafficking protein particle complex 2##NM_001011658|TRAPPC2|6399|trafficking protein particle complex 2##NM_001128835|TRAPPC2|6399|trafficking protein particle complex 2##NM_014563|TRAPPC2|6399|trafficking protein particle complex 2##NM_003611|OFD1|8481|oral-facial-digital syndrome 1##AK290354|OFD1|8481|oral-facial-digital syndrome 1##AK289677|OFD1|8481|oral-facial-digital syndrome 1##BC012324|OFD1|8481|oral-facial-digital syndrome 1##BC030787|OFD1|8481|oral-facial-digital syndrome 1##BC062432|OFD1|8481|oral-facial-digital syndrome 1##Y15164|OFD1|8481|oral-facial-digital syndrome 1##Y16355|OFD1|8481|oral-facial-digital syndrome 1##AK225847|OFD1|8481|oral-facial-digital syndrome 1##BC042830|OFD1|8481|oral-facial-digital syndrome 1	0.93573	CTCF.p2:29:0.901
chr1	221915306	221915417	reg1022725.p2	5.633	+	NM_144728	-4560	-	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	-862262	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	-862447	+	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	47	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	69	-	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	125	-	NM_144728|DUSP10|11221|dual specificity phosphatase 10##DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10	0.057696	
chr12	7000431	7000524	reg1024718.p2	5.633	+	BC071933 NM_001146316 BC002983 AK297963 AK310353 NM_032641	-17993	-	BC015100 BC070129 D28460 TSC_hg19_v1_chr12_+_6976694 AK129488 AK300661 AK313282 BC007086 BC017917 AK222638 BC009329 BC011611 BC007812 AB590181 DQ893249 DQ896578 CR541702	-23765	+	NM_001159287 TSC_hg19_v1_chr12_+_6976693 NM_000365	-23839	+	AK292367 NM_001135217 NM_006992 NM_201650 U72508 U72509 U72510 BC014450 AK292291 AK223535	13539	+	AK290525 NM_001975 TSC_hg19_v1_chr12_+_7023743 AK312402 AK295220 BC002745 M22349	23148	+	BC051795 NM_001007026	33148	+	BC071933|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##NM_001146316|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##BC002983|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##AK297963|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##AK310353|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##NM_032641|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##BC015100|TPI1|7167|triosephosphate isomerase 1##BC070129|TPI1|7167|triosephosphate isomerase 1##D28460|TPI1|7167|triosephosphate isomerase 1##AK129488|TPI1|7167|triosephosphate isomerase 1##AK300661|TPI1|7167|triosephosphate isomerase 1##AK313282|TPI1|7167|triosephosphate isomerase 1##BC007086|TPI1|7167|triosephosphate isomerase 1##BC017917|TPI1|7167|triosephosphate isomerase 1##AK222638|TPI1|7167|triosephosphate isomerase 1##BC009329|TPI1|7167|triosephosphate isomerase 1##BC011611|TPI1|7167|triosephosphate isomerase 1##BC007812|TPI1|7167|triosephosphate isomerase 1##DQ893249|TPI1|7167|triosephosphate isomerase 1##DQ896578|TPI1|7167|triosephosphate isomerase 1##CR541702|TPI1|7167|triosephosphate isomerase 1##NM_001159287|TPI1|7167|triosephosphate isomerase 1##NM_000365|TPI1|7167|triosephosphate isomerase 1##AK292367|LRRC23|10233|leucine rich repeat containing 23##NM_001135217|LRRC23|10233|leucine rich repeat containing 23##NM_006992|LRRC23|10233|leucine rich repeat containing 23##NM_201650|LRRC23|10233|leucine rich repeat containing 23##U72508|LRRC23|10233|leucine rich repeat containing 23##U72509|LRRC23|10233|leucine rich repeat containing 23##U72510|LRRC23|10233|leucine rich repeat containing 23##BC014450|LRRC23|10233|leucine rich repeat containing 23##AK292291|LRRC23|10233|leucine rich repeat containing 23##AK223535|LRRC23|10233|leucine rich repeat containing 23##AK290525|ENO2|2026|enolase 2 (gamma, neuronal)##NM_001975|ENO2|2026|enolase 2 (gamma, neuronal)##AK312402|ENO2|2026|enolase 2 (gamma, neuronal)##AK295220|ENO2|2026|enolase 2 (gamma, neuronal)##BC002745|ENO2|2026|enolase 2 (gamma, neuronal)##M22349|ENO2|2026|enolase 2 (gamma, neuronal)##BC051795|ATN1|1822|atrophin 1##NM_001007026|ATN1|1822|atrophin 1	0.0	
chr5	33166798	33166893	reg1022833.p1	5.633	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	-455040	+	AK290870 NM_000908 NM_001204375 M59305	-455357	+	NM_001204376 AK300094 AK308301	-456095	+	AK292346 TSC_hg19_v1_chr5_+_33440874 NM_152295	274011	+	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	274294	+	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	725200	-	BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK292346|TARS|6897|threonyl-tRNA synthetase##NM_152295|TARS|6897|threonyl-tRNA synthetase##AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	0.807487	CTCF.p2:-18:0.807
chr7	24755573	24755693	reg1023641.p2	5.633	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	-142545	+	BC029497 NM_000905 AK312156 K01911 M15789	-431790	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-1005717	+	TSC_hg19_v1_chr7_-_24797042 BC099911	41404	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	41434	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	41706	-	BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5	0.046775	
chr7	81112070	81112180	reg1021740.p1	5.633	+	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-563451	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-563691	-	HM217020 HM217021 HM217022 HM217023 HM217024 HM217025 HM217026 AB590184 CU678951 DQ893062 DQ896314 TSC_hg19_v1_chr7_+_80276126	-836078	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	287249	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	960721	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	960955	-	AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##HM217020|CD36|948|CD36 molecule (thrombospondin receptor)##HM217021|CD36|948|CD36 molecule (thrombospondin receptor)##HM217022|CD36|948|CD36 molecule (thrombospondin receptor)##HM217023|CD36|948|CD36 molecule (thrombospondin receptor)##HM217024|CD36|948|CD36 molecule (thrombospondin receptor)##HM217025|CD36|948|CD36 molecule (thrombospondin receptor)##HM217026|CD36|948|CD36 molecule (thrombospondin receptor)##DQ893062|CD36|948|CD36 molecule (thrombospondin receptor)##DQ896314|CD36|948|CD36 molecule (thrombospondin receptor)##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1	0.472735	CTCF.p2:-15:0.473
chr2	57744022	57744130	reg1025355.p1	5.632	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-1331167	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-1332310	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-1332871	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	529678	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	529912	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	724406	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.981471	CTCF.p2:4:0.981
chr12	132536446	132536550	reg1026292.p1	5.631	+	TSC_hg19_v1_chr12_+_132434504 AK096311 BC064554 BC037208	-101966	+	TSC_hg19_v1_chr12_+_132434464 NM_015409	-102044	+	TSC_hg19_v1_chr12_+_132414244 AB528502	-122245	+	TSC_hg19_v1_chr12_+_132568827 AK126212 AK097720 AK289710	32316	+	TSC_hg19_v1_chr12_+_132568851 BC015414 BC066974	32357	+	CU691832 TSC_hg19_v1_chr12_-_132628865 BC040185 BC029279 AK097078 NM_175066 AB593157	92372	-	AK096311|EP400|57634|E1A binding protein p400##BC064554|EP400|57634|E1A binding protein p400##BC037208|EP400|57634|E1A binding protein p400##NM_015409|EP400|57634|E1A binding protein p400##AK126212|EP400NL|347918|EP400 N-terminal like##AK097720|EP400NL|347918|EP400 N-terminal like##AK289710|EP400NL|347918|EP400 N-terminal like##BC015414|EP400NL|347918|EP400 N-terminal like##BC066974|EP400NL|347918|EP400 N-terminal like##BC040185|DDX51|317781|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51##BC029279|DDX51|317781|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51##AK097078|DDX51|317781|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51##NM_175066|DDX51|317781|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51##AB593157|DDX51|317781|DEAD (Asp-Glu-Ala-Asp) box polypeptide 51	0.830069	CTCF.p2:-2:0.830
chr19	42891282	42891398	reg1020441.p1	5.631	+	AB011541 BC153880 NM_001410 TSC_hg19_v1_chr19_+_42829786	-61554	+	TSC_hg19_v1_chr19_+_42817516 NM_173633 AK075286	-73811	+	NM_001145939 TSC_hg19_v1_chr19_-_42806944 NM_001145940	-84399	-	BC101197 BC101198 AB049591 AK312080 NM_032488	3091	-	TSC_hg19_v1_chr19_+_42901325 AK311181	9972	+	TSC_hg19_v1_chr19_-_42928157 BC029301	36873	-	AB011541|MEGF8|1954|multiple EGF-like-domains 8##BC153880|MEGF8|1954|multiple EGF-like-domains 8##NM_001410|MEGF8|1954|multiple EGF-like-domains 8##NM_173633|TMEM145|284339|transmembrane protein 145##AK075286|TMEM145|284339|transmembrane protein 145##NM_001145939|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##NM_001145940|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC101197|CNFN|84518|cornifelin##BC101198|CNFN|84518|cornifelin##AB049591|CNFN|84518|cornifelin##AK312080|CNFN|84518|cornifelin##NM_032488|CNFN|84518|cornifelin##BC029301|LIPE|3991|lipase, hormone-sensitive	0.037663	
chr20	45779373	45779529	reg1031004.p1	5.631	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	-255899	+	TSC_hg19_v1_chr20_+_45523505 BC008803	-255943	+	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	-256169	+	TSC_hg19_v1_chr20_-_45927496 BC030721	148118	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	197196	-	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	206037	-	AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8	0.053741	
chr21	34719992	34720135	reg1025183.p1	5.631	+	AK222770 AK222812 AK312631 TSC_hg19_v1_chr21_+_34697277 BC021825 J03171 BC002590 AB528746 CU692410 DQ891323 DQ894507	-22745	+	TSC_hg19_v1_chr21_+_34697236 NM_000629	-22845	+	TSC_hg19_v1_chr21_+_34638753 AK299961 AB590138 DQ892552 DQ895763 BT009777	-81309	+	TSC_hg19_v1_chr21_+_34775192 NM_005534 U05875	55133	+	TSC_hg19_v1_chr21_+_34775735 BC003624 U05877	55669	+	AK314005 TSC_hg19_v1_chr21_+_34775746 AK292246	55685	+	AK222770|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK222812|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK312631|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC021825|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##J03171|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC002590|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ891323|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ894507|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##NM_000629|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK299961|IL10RB|3588|interleukin 10 receptor, beta##DQ892552|IL10RB|3588|interleukin 10 receptor, beta##DQ895763|IL10RB|3588|interleukin 10 receptor, beta##BT009777|IL10RB|3588|interleukin 10 receptor, beta##NM_005534|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05875|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##BC003624|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05877|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK314005|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK292246|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)	0.989313	CTCF.p2:21:0.989
chr22	39436558	39436734	reg1021884.p1	5.631	+	AK294810 NM_001006666 NM_145298	-6	+	NM_152426 TSC_hg19_v1_chr22_+_39417130	-19519	+	CR456394 TSC_hg19_v1_chr22_+_39410295 AB208979 AB590057 CU012952 CU013240	-26320	+	AK092614 NM_021822 AK315650 BC061914 AF182420 CR456472 BC009683 BC024268 AB266487 AB462950 CU013022 CU013310 CU692904 JF262036	36541	+	NM_001166002 NM_001166003 NM_001166004 NM_181773 BC069023 CR456481	56624	+	TSC_hg19_v1_chr22_-_39529023 BC128418	92401	-	AK294810|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_001006666|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_145298|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_152426|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AK092614|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_021822|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK315650|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC061914|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AF182420|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CR456472|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC009683|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC024268|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AB266487|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013022|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013310|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##JF262036|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC128418|CBX7|23492|chromobox homolog 7	0.0	
chr10	94334236	94334344	reg1023820.p2	5.630	+	TSC_hg19_v1_chr10_-_94333847 NM_004969	-423	-	TSC_hg19_v1_chr10_-_94333845 M21188	-453	-	TSC_hg19_v1_chr10_-_94333800 AB527891 AK312810 BC096336 BC096337 BC096338 BC096339 BC036188	-516	-	TSC_hg19_v1_chr10_+_94352824 NM_004523	18526	+	TSC_hg19_v1_chr10_+_94352886 BC050421 BC050667 AK314258	18607	+	TSC_hg19_v1_chr10_+_94352960 BC126211 BC136474 U37426 X85137	18753	+	NM_004969|IDE|3416|insulin-degrading enzyme##M21188|IDE|3416|insulin-degrading enzyme##AK312810|IDE|3416|insulin-degrading enzyme##BC096336|IDE|3416|insulin-degrading enzyme##BC096337|IDE|3416|insulin-degrading enzyme##BC096338|IDE|3416|insulin-degrading enzyme##BC096339|IDE|3416|insulin-degrading enzyme##BC036188|IDE|3416|insulin-degrading enzyme##NM_004523|KIF11|3832|kinesin family member 11##BC050421|KIF11|3832|kinesin family member 11##BC050667|KIF11|3832|kinesin family member 11##AK314258|KIF11|3832|kinesin family member 11##BC126211|KIF11|3832|kinesin family member 11##BC136474|KIF11|3832|kinesin family member 11##U37426|KIF11|3832|kinesin family member 11##X85137|KIF11|3832|kinesin family member 11	0.028996	
chr21	26722490	26722620	reg1025744.p1	5.630	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-921487	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-4351782	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-4351865	+	TSC_hg19_v1_chr21_+_26934442 AF402776	211917	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	257260	-	NM_021219 TSC_hg19_v1_chr21_+_27011719	289098	+	AK124194|FLJ42200|400860|FLJ42200 protein##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##NM_021219|JAM2|58494|junctional adhesion molecule 2	0.816537	CTCF.p2:15:0.817
chr7	69506048	69506199	reg1025661.p1	5.630	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-441535	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-441794	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-442287	+	TSC_hg19_v1_chr7_+_70231164 AK296981	725082	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1091665	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2295655	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.963482	CTCF.p2:31:0.942
chr7	93633588	93633768	reg1022464.p1	5.630	+	BT009853 DQ894078 BC000899 TSC_hg19_v1_chr7_-_93633668 CR749267 AF007551 AK313984 BC012595 NM_005868	-64	-	NM_004126 BC009709	-82622	+	BC029367 NM_021955	-97859	+	J03464 NM_000089 X02488	390194	+	TSC_hg19_v1_chr7_+_94024206 AK297786 AK223175 AK300194 Z74616 AK226074 BC042586 BC054498 Y00724 CU691094 AB384984	390593	+	TSC_hg19_v1_chr7_+_94139172 BC029543 NM_022900 BC063284 AF397424	505444	+	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##J03464|COL1A2|1278|collagen, type I, alpha 2##NM_000089|COL1A2|1278|collagen, type I, alpha 2##X02488|COL1A2|1278|collagen, type I, alpha 2##AK297786|COL1A2|1278|collagen, type I, alpha 2##AK223175|COL1A2|1278|collagen, type I, alpha 2##AK300194|COL1A2|1278|collagen, type I, alpha 2##Z74616|COL1A2|1278|collagen, type I, alpha 2##AK226074|COL1A2|1278|collagen, type I, alpha 2##BC042586|COL1A2|1278|collagen, type I, alpha 2##BC054498|COL1A2|1278|collagen, type I, alpha 2##Y00724|COL1A2|1278|collagen, type I, alpha 2##BC029543|CASD1|64921|CAS1 domain containing 1##NM_022900|CASD1|64921|CAS1 domain containing 1##BC063284|CASD1|64921|CAS1 domain containing 1##AF397424|CASD1|64921|CAS1 domain containing 1	0.010515	
chr9	136019584	136019694	reg1000865.p1	5.630	+	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	-23140	-	NM_001807 S79774 M85201 BC042510 AK299965	-82264	+	TSC_hg19_v1_chr9_+_135906386 AK000194 AK097295 AK293980 BC006409 AY007123 DQ892071 DQ895265 AJ420443 BC030157	-113251	+	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	5047	-	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	19658	-	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	64981	-	AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B	0.0	
chr19	19106714	19106821	reg1025667.p2	5.629	+	TSC_hg19_v1_chr19_-_19052045 NM_004838	-54729	-	TSC_hg19_v1_chr19_-_19052010 BC012113	-54813	-	AK313995 NM_001145722 AF093265 NM_001145721	-55631	-	TSC_hg19_v1_chr19_-_19144296 AL832488	37513	-	AK074842 TSC_hg19_v1_chr19_-_19144306 BX647813	37539	-	TSC_hg19_v1_chr19_-_19144327 AK291275 AL832587 AF518874 NM_001017392 NM_014884	37585	-	NM_004838|HOMER3|9454|homer homolog 3 (Drosophila)##BC012113|HOMER3|9454|homer homolog 3 (Drosophila)##AK313995|HOMER3|9454|homer homolog 3 (Drosophila)##NM_001145722|HOMER3|9454|homer homolog 3 (Drosophila)##AF093265|HOMER3|9454|homer homolog 3 (Drosophila)##NM_001145721|HOMER3|9454|homer homolog 3 (Drosophila)##AL832488|SUGP2|10147|SURP and G patch domain containing 2##AK074842|SUGP2|10147|SURP and G patch domain containing 2##BX647813|SUGP2|10147|SURP and G patch domain containing 2##AK291275|SUGP2|10147|SURP and G patch domain containing 2##AF518874|SUGP2|10147|SURP and G patch domain containing 2##NM_001017392|SUGP2|10147|SURP and G patch domain containing 2##NM_014884|SUGP2|10147|SURP and G patch domain containing 2	0.897405	CTCF.p2:-29:0.897
chr2	169562192	169562317	reg1024615.p1	5.629	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	-249379	+	TSC_hg19_v1_chr2_+_169312764 AK172775	-249495	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	-458181	-	AK093444 AX748130 NM_001171631	80794	+	NM_001039724 NM_001171632 BC014189 NM_052946 AK002203 AK290254 BC093072 AJ532842 DQ402497	96873	+	TSC_hg19_v1_chr2_-_169746945 AF225416 BC022255 NM_020675 AK291093	184687	-	NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6##AK172775|CERS6|253782|ceramide synthase 6##BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##AK093444|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171631|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001039724|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171632|NOSTRIN|115677|nitric oxide synthase trafficker##BC014189|NOSTRIN|115677|nitric oxide synthase trafficker##NM_052946|NOSTRIN|115677|nitric oxide synthase trafficker##AK002203|NOSTRIN|115677|nitric oxide synthase trafficker##AK290254|NOSTRIN|115677|nitric oxide synthase trafficker##BC093072|NOSTRIN|115677|nitric oxide synthase trafficker##AJ532842|NOSTRIN|115677|nitric oxide synthase trafficker##DQ402497|NOSTRIN|115677|nitric oxide synthase trafficker##AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	0.707545	CTCF.p2:11:0.708
chr2	191812760	191812926	reg1023599.p2	5.629	+	AF097492 TSC_hg19_v1_chr2_+_191745984	-66891	+	AF223943 TSC_hg19_v1_chr2_+_191745810 AB463054	-67043	+	TSC_hg19_v1_chr2_+_191745568 AF097495 Y08264 AF327434	-67259	+	TSC_hg19_v1_chr2_-_191872323 BC141921	59509	-	CR749636 TSC_hg19_v1_chr2_-_191878882	66039	-	TSC_hg19_v1_chr2_-_191878883 AK315002 BC002704	66051	-	AF097492|GLS|2744|glutaminase##AF223943|GLS|2744|glutaminase##AF097495|GLS|2744|glutaminase##Y08264|GLS|2744|glutaminase##AF327434|GLS|2744|glutaminase##BC141921|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##CR749636|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##AK315002|STAT1|6772|signal transducer and activator of transcription 1, 91kDa##BC002704|STAT1|6772|signal transducer and activator of transcription 1, 91kDa	0.011121	
chr17	61678116	61678236	reg1024042.p1	5.628	+	TSC_hg19_v1_chr17_+_61628000 DQ891233 DQ894417 AB590131	-50164	+	TSC_hg19_v1_chr17_+_61627929 U94747	-50232	+	TSC_hg19_v1_chr17_+_61627855 AK303212	-50312	+	TSC_hg19_v1_chr17_+_61678230 AK315375 NM_016360 AK094052 AX748431 BC005049	56	+	TSC_hg19_v1_chr17_+_61678277 BC007744 CU675789	183	+	TSC_hg19_v1_chr17_+_61699772 AX775739 AX775741 AK315305	21570	+	DQ891233|DCAF7|10238|DDB1 and CUL4 associated factor 7##DQ894417|DCAF7|10238|DDB1 and CUL4 associated factor 7##U94747|DCAF7|10238|DDB1 and CUL4 associated factor 7##AK303212|DCAF7|10238|DDB1 and CUL4 associated factor 7##AK315375|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I##NM_016360|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I##AK094052|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I##BC005049|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I##BC007744|TACO1|51204|translational activator of mitochondrially encoded cytochrome c oxidase I##AX775739|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AX775741|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AK315305|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3	0.0	
chr7	57373049	57373155	reg1023371.p1	5.628	+	AF277624 NM_033273	-165532	-	Y10275 TSC_hg19_v1_chr7_-_56184079 BC043523 NM_001145712	-1189059	-	TSC_hg19_v1_chr7_-_56174186 NM_016139	-1198901	-	AK131575 NM_001159279	136780	+	NM_001159522	6132718	+	NM_001159524	6294478	+	AF277624|ZNF479|90827|zinc finger protein 479##NM_033273|ZNF479|90827|zinc finger protein 479##BC043523|LOC389493|389493|uncharacterized protein LOC389493##NM_001145712|LOC389493|389493|uncharacterized protein LOC389493##NM_016139|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##AK131575|ZNF716|441234|zinc finger protein 716##NM_001159279|ZNF716|441234|zinc finger protein 716##NM_001159522|ZNF727|442319|zinc finger protein 727##NM_001159524|ZNF735|730291|zinc finger protein 735	0.717676	CTCF.p2:-5:0.718
chr1	235184033	235184187	reg1015317.p2	5.627	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-288336	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-438864	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-440252	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	107979	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	108121	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	140453	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr12	91971792	91971970	reg1027181.p2	5.627	+	NM_001920	-395076	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-395301	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-398570	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	567762	-	AJ845165 AJ845166 NM_001025233	845853	+	AJ845168 NM_001025232	850042	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.012845	
chr19	46905745	46905926	reg1000302.p2	5.627	+	TSC_hg19_v1_chr19_+_46850348 AB527518 AK293402 AK297095 BT007275 BC000750 BC001831 X89416 U25174	-55476	+	TSC_hg19_v1_chr19_+_46850343 NM_001204284 NM_006247 BC001970 AK223222 AK312683	-55541	+	AK021881 TSC_hg19_v1_chr19_+_46844054	-61827	+	AK297668 AL136609 JN703457 NM_032040	11036	-	AL834344 TSC_hg19_v1_chr19_-_46974751 AK290218 BC051688	68887	-	TSC_hg19_v1_chr19_-_46974789 BC032508 NM_001103149 NM_018215	68970	-	AK293402|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK297095|PPP5C|5536|protein phosphatase 5, catalytic subunit##BT007275|PPP5C|5536|protein phosphatase 5, catalytic subunit##BC000750|PPP5C|5536|protein phosphatase 5, catalytic subunit##BC001831|PPP5C|5536|protein phosphatase 5, catalytic subunit##X89416|PPP5C|5536|protein phosphatase 5, catalytic subunit##U25174|PPP5C|5536|protein phosphatase 5, catalytic subunit##NM_001204284|PPP5C|5536|protein phosphatase 5, catalytic subunit##NM_006247|PPP5C|5536|protein phosphatase 5, catalytic subunit##BC001970|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK223222|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK312683|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK021881|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK297668|CCDC8|83987|coiled-coil domain containing 8##AL136609|CCDC8|83987|coiled-coil domain containing 8##JN703457|CCDC8|83987|coiled-coil domain containing 8##NM_032040|CCDC8|83987|coiled-coil domain containing 8##AL834344|PNMAL1|55228|PNMA-like 1##AK290218|PNMAL1|55228|PNMA-like 1##BC051688|PNMAL1|55228|PNMA-like 1##BC032508|PNMAL1|55228|PNMA-like 1##NM_001103149|PNMAL1|55228|PNMA-like 1##NM_018215|PNMAL1|55228|PNMA-like 1	0.0	
chr22	34501596	34501708	reg1019919.p2	5.627	+	AJ007583 AB011181 NM_004737 NM_133642	-185282	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-1047297	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-1098926	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	960497	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1151824	+	AK293694 NM_001135729	1193615	+	AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)	0.642877	CTCF.p2:-2:0.643
chr4	10463004	10463164	reg1025035.p1	5.626	+	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-4074	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-344548	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-344606	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	223317	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	967448	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	3022867	-	BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr4	167090409	167090510	reg1025232.p1	5.626	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-296005	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-790302	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-841604	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	1065152	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	1065245	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	1065281	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.0	
chr1	192485949	192486130	reg1022477.p1	5.625	+	AY643711 NM_001039152	-199918	+	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	-358436	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	-2039304	-	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	58869	+	NM_002927 NM_144766 AF030107 BC016667	119245	+	BC042755 BC044742 NM_002923 TSC_hg19_v1_chr1_+_192778168 AK313668 BC007049 L13463 AY971351 AB528517 AF493926 BT007065 CR457410 CU675517 DQ893178 DQ896478	292145	+	AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1##NM_002927|RGS13|6003|regulator of G-protein signaling 13##NM_144766|RGS13|6003|regulator of G-protein signaling 13##AF030107|RGS13|6003|regulator of G-protein signaling 13##BC016667|RGS13|6003|regulator of G-protein signaling 13##BC042755|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC044742|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002923|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AK313668|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC007049|RGS2|5997|regulator of G-protein signaling 2, 24kDa##L13463|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AY971351|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AF493926|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT007065|RGS2|5997|regulator of G-protein signaling 2, 24kDa##CR457410|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ893178|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ896478|RGS2|5997|regulator of G-protein signaling 2, 24kDa	0.0	
chr13	33631757	33631884	reg1026311.p1	5.625	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-41297	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-471137	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-471181	+	AY082590 BC046563 NM_001243466 NM_178007	128395	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	148344	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	228047	-	AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr2	119769133	119769240	reg1018632.p2	5.625	+	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	-69366	+	NM_001426	-163428	-	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-923123	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	147218	-	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	212199	+	TSC_hg19_v1_chr2_+_119981409 AF423424 AK001691 AY029585 AY214461 BX538047 AK291608 AF238864 AF262322 AY082673 BC095421 BC042150	212241	+	BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##NM_001426|EN1|2019|engrailed homeobox 1##AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase##AF423424|STEAP3|55240|STEAP family member 3, metalloreductase##AK001691|STEAP3|55240|STEAP family member 3, metalloreductase##AY029585|STEAP3|55240|STEAP family member 3, metalloreductase##AY214461|STEAP3|55240|STEAP family member 3, metalloreductase##BX538047|STEAP3|55240|STEAP family member 3, metalloreductase##AK291608|STEAP3|55240|STEAP family member 3, metalloreductase##AF238864|STEAP3|55240|STEAP family member 3, metalloreductase##AF262322|STEAP3|55240|STEAP family member 3, metalloreductase##AY082673|STEAP3|55240|STEAP family member 3, metalloreductase##BC095421|STEAP3|55240|STEAP family member 3, metalloreductase##BC042150|STEAP3|55240|STEAP family member 3, metalloreductase	0.0	
chr2	175895843	175896006	reg1024076.p1	5.625	+	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	-25911	-	AK055060 NM_001206602	-183614	-	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	-266755	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	136971	-	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	150380	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	971051	-	AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1##AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715	0.411082	CTCF.p2:-6:0.253
chr9	80070354	80070494	reg1026072.p1	5.625	+	AK027023 TSC_hg19_v1_chr9_+_79968352	-102076	+	TSC_hg19_v1_chr9_+_79792474 AB054005	-277916	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	-278085	+	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	192807	-	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	575760	-	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	780606	+	AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa	0.791397	CTCF.p2:0:0.791
chr9	94496774	94496928	reg1027436.p1	5.625	+	TSC_hg19_v1_chr9_-_94186159 NM_005384	-310669	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	-310807	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	-372652	-	TSC_hg19_v1_chr9_-_94711095 BC033697	214277	-	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	215538	-	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	380813	-	NM_005384|NFIL3|4783|nuclear factor, interleukin 3 regulated##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1	0.999909	CTCF.p2:-6:1.000
chrX	137274281	137274403	reg1027288.p1	5.625	+	EU532020 TSC_hg19_v1_chrX_+_136648691 BC113393 BC113395 AB464363 HQ258447	-625575	+	TSC_hg19_v1_chrX_+_136648313 AF028706 NM_003413	-626013	+	BC069439 NM_054021 CU686814	-1160507	-	AF100143 TSC_hg19_v1_chrX_-_137793504 AK289960 BC034340	519112	-	BC012347 NM_004114 TSC_hg19_v1_chrX_-_137793839	519495	-	AF100144 NM_033642	547172	-	EU532020|ZIC3|7547|Zic family member 3##BC113393|ZIC3|7547|Zic family member 3##BC113395|ZIC3|7547|Zic family member 3##HQ258447|ZIC3|7547|Zic family member 3##AF028706|ZIC3|7547|Zic family member 3##NM_003413|ZIC3|7547|Zic family member 3##BC069439|GPR101|83550|G protein-coupled receptor 101##NM_054021|GPR101|83550|G protein-coupled receptor 101##AF100143|FGF13|2258|fibroblast growth factor 13##AK289960|FGF13|2258|fibroblast growth factor 13##BC034340|FGF13|2258|fibroblast growth factor 13##BC012347|FGF13|2258|fibroblast growth factor 13##NM_004114|FGF13|2258|fibroblast growth factor 13##AF100144|FGF13|2258|fibroblast growth factor 13##NM_033642|FGF13|2258|fibroblast growth factor 13	0.927917	CTCF.p2:-16:0.928
chr11	4006241	4006388	reg1026062.p1	5.624	+	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	-129385	+	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	-144115	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	-144159	-	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	109675	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	109752	+	TSC_hg19_v1_chr11_+_4116085 AK297988 BC006498 CU675435 DQ893028 DQ896272	109845	+	NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1##X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1##AK297988|RRM1|6240|ribonucleotide reductase M1##BC006498|RRM1|6240|ribonucleotide reductase M1##DQ893028|RRM1|6240|ribonucleotide reductase M1##DQ896272|RRM1|6240|ribonucleotide reductase M1	0.075643	
chr2	25599916	25600096	reg1006520.p2	5.624	+	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	-34544	-	TSC_hg19_v1_chr2_-_25565353 AB208833	-34643	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	-34678	-	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	296395	-	AB385496 TSC_hg19_v1_chr2_-_26101159	501123	-	TSC_hg19_v1_chr2_-_26101174 AB084279	501167	-	BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)	0.0	
chr6	161089038	161089160	reg1024199.p1	5.624	+	NM_005577	-1693	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	-319705	+	CU689064 BC039899 AK290787 X98333 AB075951 BC030978 NM_003058	-409224	-	NM_000301 NM_001168338 AK308036 AK312966 AK298338 X05199 M74220 BC060513	34162	+	TSC_hg19_v1_chr6_+_161412797 BC146770 D86968	323643	+	TSC_hg19_v1_chr6_+_161412815 AF002715 NM_005922 NM_006724	323715	+	NM_005577|LPA|4018|lipoprotein, Lp(a)##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##BC039899|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AK290787|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##X98333|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AB075951|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC030978|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003058|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_000301|PLG|5340|plasminogen##NM_001168338|PLG|5340|plasminogen##AK308036|PLG|5340|plasminogen##AK312966|PLG|5340|plasminogen##AK298338|PLG|5340|plasminogen##X05199|PLG|5340|plasminogen##M74220|PLG|5340|plasminogen##BC060513|PLG|5340|plasminogen##BC146770|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##D86968|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AF002715|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_005922|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_006724|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4	0.992973	CTCF.p2:25:0.993
chr8	92248825	92248920	reg1023682.p1	5.624	+	AK097393 NM_001129890 AK130865	-134013	+	NM_016023 TSC_hg19_v1_chr8_+_92082548 BX647772 AK293843 BC029760 AK310823 AK291646 AF151836	-166358	+	TSC_hg19_v1_chr8_-_92082268 BC067244 BC105990 BC030623	-166533	-	AJ413229 NM_052832 NM_134266 AF331521 AJ413228 AJ413230	12658	+	D14289 NM_175636	781013	-	TSC_hg19_v1_chr8_-_93074863 S82690	826027	-	AK097393|LRRC69|100130742|leucine rich repeat containing 69##NM_001129890|LRRC69|100130742|leucine rich repeat containing 69##AK130865|LRRC69|100130742|leucine rich repeat containing 69##NM_016023|OTUD6B|51633|OTU domain containing 6B##BX647772|OTUD6B|51633|OTU domain containing 6B##AK293843|OTUD6B|51633|OTU domain containing 6B##BC029760|OTUD6B|51633|OTU domain containing 6B##AK310823|OTUD6B|51633|OTU domain containing 6B##AK291646|OTUD6B|51633|OTU domain containing 6B##AF151836|OTUD6B|51633|OTU domain containing 6B##AJ413229|SLC26A7|115111|solute carrier family 26, member 7##NM_052832|SLC26A7|115111|solute carrier family 26, member 7##NM_134266|SLC26A7|115111|solute carrier family 26, member 7##AF331521|SLC26A7|115111|solute carrier family 26, member 7##AJ413228|SLC26A7|115111|solute carrier family 26, member 7##AJ413230|SLC26A7|115111|solute carrier family 26, member 7##D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	0.940045	CTCF.p2:-10:0.940
chr1	202139961	202140056	reg1026469.p1	5.623	+	TSC_hg19_v1_chr1_-_202130715 AK127214 AK302869 NM_001199797 NM_002832	-9307	-	TSC_hg19_v1_chr1_-_202129731 AK301051 AK301757 AK311661 AK293186 AK301980	-10264	-	M64322 TSC_hg19_v1_chr1_-_202129719 AK225920 D11327	-10294	-	NM_001017403 AB049405	23166	+	AY358119 BC038795 NM_021636 BC047905	32884	+	AF190501 NM_001017404	43274	+	AK127214|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK302869|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_001199797|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_002832|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301051|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301757|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK311661|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK293186|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301980|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##M64322|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK225920|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##D11327|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_001017403|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AB049405|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AY358119|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC038795|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_021636|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC047905|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AF190501|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_001017404|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6	0.960433	CTCF.p2:0:0.960
chr22	46227520	46227644	reg1023250.p1	5.623	+	CR456568 TSC_hg19_v1_chr22_+_46067931 AK095309 CR457381 DQ893240 DQ896570	-159665	+	AK025734 TSC_hg19_v1_chr22_+_46067746 AF119662 BC007508	-159826	+	TSC_hg19_v1_chr22_+_46067733 AF086923 AL050282	-159853	+	AF416743 NM_058238 TSC_hg19_v1_chr22_-_46373045	145447	-	TSC_hg19_v1_chr22_+_46449736 BC036832	222142	+	AB528792 AK001807 NM_018280 TSC_hg19_v1_chr22_-_46450052	222430	-	CR456568|ATXN10|25814|ataxin 10##AK095309|ATXN10|25814|ataxin 10##CR457381|ATXN10|25814|ataxin 10##DQ893240|ATXN10|25814|ataxin 10##DQ896570|ATXN10|25814|ataxin 10##AK025734|ATXN10|25814|ataxin 10##AF119662|ATXN10|25814|ataxin 10##BC007508|ATXN10|25814|ataxin 10##AF086923|ATXN10|25814|ataxin 10##AL050282|ATXN10|25814|ataxin 10##AF416743|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_058238|WNT7B|7477|wingless-type MMTV integration site family, member 7B##AK001807|C22orf26|55267|chromosome 22 open reading frame 26##NM_018280|C22orf26|55267|chromosome 22 open reading frame 26	0.020027	
chr5	83551294	83551412	reg1024084.p1	5.623	+	AK313713 NM_001884 X17405 X78076 X78075	-534419	-	NM_001126336 NM_001164097 NM_001164098 NM_004385 TSC_hg19_v1_chr5_+_82767562 U16306 U26555 X15998 AK307642 AB209491 BC050524 D32039	-783736	+	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	-1177970	+	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	128893	-	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	129311	-	TSC_hg19_v1_chr5_+_85913757 AK026505	2362405	+	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001126336|VCAN|1462|versican##NM_001164097|VCAN|1462|versican##NM_001164098|VCAN|1462|versican##NM_004385|VCAN|1462|versican##U16306|VCAN|1462|versican##U26555|VCAN|1462|versican##X15998|VCAN|1462|versican##AK307642|VCAN|1462|versican##AB209491|VCAN|1462|versican##BC050524|VCAN|1462|versican##D32039|VCAN|1462|versican##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc	0.635261	CTCF.p2:2:0.635
chr6	43971032	43971212	reg1019386.p2	5.623	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	-2748	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-232252	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-232588	+	CR627460 TSC_hg19_v1_chr6_+_44094741	123576	+	TSC_hg19_v1_chr6_-_44095161 AK312086	124038	-	TSC_hg19_v1_chr6_-_44095190 NM_032111	124076	-	BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14##NM_032111|MRPL14|64928|mitochondrial ribosomal protein L14	0.0	
chr2	96823674	96823854	reg1020551.p4	5.622	+	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	-12605	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	-12810	-	BC107126 AJ537600 BC107127 NM_001002036	-19591	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	50291	-	TSC_hg19_v1_chr2_+_96874144 AK311432	50390	+	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	50770	-	BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.0	
chr6	65179414	65179516	reg1026454.p2	5.622	+	AF091622 BC113650 BC113652 NM_015153 D87685 AB385299	-823023	+	TSC_hg19_v1_chr6_+_64346027 BX648268 AK290491	-833448	+	TSC_hg19_v1_chr6_+_64345729 AK315868 AK298580	-833642	+	AY358133 NM_198283 AK310478	1110240	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	1237628	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	3419563	-	AF091622|PHF3|23469|PHD finger protein 3##BC113650|PHF3|23469|PHD finger protein 3##BC113652|PHF3|23469|PHD finger protein 3##NM_015153|PHF3|23469|PHD finger protein 3##D87685|PHF3|23469|PHD finger protein 3##BX648268|PHF3|23469|PHD finger protein 3##AK290491|PHF3|23469|PHD finger protein 3##AK315868|PHF3|23469|PHD finger protein 3##AK298580|PHF3|23469|PHD finger protein 3##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3	0.848541	CTCF.p2:6:0.830
chrX	15834338	15834482	reg1027584.p1	5.622	+	BC113454 BC113480 NM_005089 TSC_hg19_v1_chrX_+_15808594 D49677 BC050451 BC065719 AK309673 HQ258575	-25811	+	AB021660 AK291050 NM_007220	-78009	+	BC014317 NM_020665	-151257	-	TSC_hg19_v1_chrX_-_15872876 AF251295	38466	-	TSC_hg19_v1_chrX_-_15872883 BC001117 BC071867	38476	-	TSC_hg19_v1_chrX_-_15872907 AK302908	38499	-	BC113454|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC113480|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##NM_005089|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##D49677|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC050451|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC065719|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AK309673|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##HQ258575|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AB021660|CA5B|11238|carbonic anhydrase VB, mitochondrial##AK291050|CA5B|11238|carbonic anhydrase VB, mitochondrial##NM_007220|CA5B|11238|carbonic anhydrase VB, mitochondrial##BC014317|TMEM27|57393|transmembrane protein 27##NM_020665|TMEM27|57393|transmembrane protein 27##AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	0.0	
chr12	133026262	133026377	reg1023767.p2	5.621	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-120462	-	AF458594 NM_021808	-335747	-	TSC_hg19_v1_chr12_+_132629014 BC071958 CU687200 DQ892518 DQ895730 BC007893	-397263	+	NM_001142641	40837	+	NM_001195520	160717	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	169085	+	BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC071958|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ892518|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ895730|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC007893|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##NM_001142641|FBRSL1|57666|fibrosin-like 1##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2	0.0	
chr17	7886143	7886242	reg1024093.p2	5.621	+	NM_001037144 NM_053051 AY160226 AY160227 TSC_hg19_v1_chr17_+_7835522 AK293076 AF331638 BC021134 AL833907	-50663	+	AB528455 DQ890860 DQ894015 BC025413 TSC_hg19_v1_chr17_-_7835265 BC032717 AK314038 NM_021210 NM_001166621	-50932	-	AF016411 BC096232 BC096233 BC096234 BC099634 NM_004732	-53440	-	DQ426876 NM_000180 M92432	19759	+	AK298095 NM_001039130 NM_001039131 NM_001141 AK292779 AK300554 BC063647 U78294 BC035217 BC033294 AB590334 DQ891345 EU176579 AF468051 AF468052 AF468053 AF468054	56220	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	74010	+	NM_001037144|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##NM_053051|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160226|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160227|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AK293076|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AF331638|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##BC021134|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AL833907|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##DQ890860|TRAPPC1|58485|trafficking protein particle complex 1##DQ894015|TRAPPC1|58485|trafficking protein particle complex 1##BC025413|TRAPPC1|58485|trafficking protein particle complex 1##BC032717|TRAPPC1|58485|trafficking protein particle complex 1##AK314038|TRAPPC1|58485|trafficking protein particle complex 1##NM_021210|TRAPPC1|58485|trafficking protein particle complex 1##NM_001166621|TRAPPC1|58485|trafficking protein particle complex 1##AF016411|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096232|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096233|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096234|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC099634|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_004732|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_000180|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##M92432|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##AK298095|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039130|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039131|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001141|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK292779|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK300554|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC063647|ALOX15B|247|arachidonate 15-lipoxygenase, type B##U78294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC035217|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC033294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##DQ891345|ALOX15B|247|arachidonate 15-lipoxygenase, type B##EU176579|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468051|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468052|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468053|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468054|ALOX15B|247|arachidonate 15-lipoxygenase, type B	0.0	
chr1	99456836	99456937	reg1023737.p1	5.621	+	TSC_hg19_v1_chr1_+_99127278 NM_015976 NM_152238 AK025031 AK223229 AL049989 AF121857 AK298211 BC018105 BC010349	-329578	+	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	-1070280	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	-1070327	-	BC040174 AK295688 BC140086 BC143086 AY634620 BC136350 BC144000 AY574039 FJ472844 NM_001010861 NM_001037317	13426	-	AF541281 NM_001166252 NM_014839 AB007924 AK056665 AY304518 AB384482 BC042963 TSC_hg19_v1_chr1_+_99730047 AK291369 AK297417	273064	+	TSC_hg19_v1_chr1_+_99730067 AF357013 AK300361	273199	+	NM_015976|SNX7|51375|sorting nexin 7##NM_152238|SNX7|51375|sorting nexin 7##AK025031|SNX7|51375|sorting nexin 7##AK223229|SNX7|51375|sorting nexin 7##AL049989|SNX7|51375|sorting nexin 7##AF121857|SNX7|51375|sorting nexin 7##AK298211|SNX7|51375|sorting nexin 7##BC018105|SNX7|51375|sorting nexin 7##BC010349|SNX7|51375|sorting nexin 7##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##BC040174|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AK295688|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC140086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC143086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY634620|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC136350|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC144000|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY574039|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##FJ472844|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001010861|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001037317|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AF357013|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK300361|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	0.750804	CTCF.p2:0:0.751
chr2	231515432	231515574	reg1025109.p2	5.621	+	AK091898 NM_001206704	-234033	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-234547	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-234584	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	62043	+	TSC_hg19_v1_chr2_+_231577633 BC020570	62141	+	AK292382 NM_001130849 NM_001130850 AK315692	62775	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.0	
chr6	84245891	84245998	reg1023360.p2	5.621	+	TSC_hg19_v1_chr6_+_84222252 AY358661 BC037170 AK291928	-23664	+	NM_001170423 NM_153362 TSC_hg19_v1_chr6_+_84222226	-23734	+	TSC_hg19_v1_chr6_-_84140899 NM_002395	-105040	-	TSC_hg19_v1_chr6_-_84418505 AK294898	172555	-	TSC_hg19_v1_chr6_-_84418819 AB014556 AK289582 NM_001242792	172833	-	BC044579 TSC_hg19_v1_chr6_-_84419072 CR749348	173111	-	AY358661|PRSS35|167681|protease, serine, 35##BC037170|PRSS35|167681|protease, serine, 35##AK291928|PRSS35|167681|protease, serine, 35##NM_001170423|PRSS35|167681|protease, serine, 35##NM_153362|PRSS35|167681|protease, serine, 35##NM_002395|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK294898|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##AB014556|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##AK289582|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##NM_001242792|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##BC044579|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##CR749348|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)	0.991888	CTCF.p2:0:0.992
chr6_mcf_hap5	4158717	4158840	reg1027151.p1	5.621	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.08447	
chrX	30653887	30654042	reg1029670.p1	5.621	+	TSC_hg19_v1_chrX_-_30595884 AK021639 BC020611 NM_025159	-58007	-	HQ692832 AB464646 BC011564 NM_000475	-326478	-	NM_177404 BC013772	-388668	+	TSC_hg19_v1_chrX_+_30671493 BC042421 BC071595 NM_000167 NM_001128127 NM_001205019 NM_203391	17530	+	TSC_hg19_v1_chrX_+_30671539 AK313215	17578	+	TSC_hg19_v1_chrX_+_30671612 L13943 AK294938 AK294304 BX647604 AK308238 BC037549 CU688226 DQ891580 DQ894773	17664	+	AK021639|CXorf21|80231|chromosome X open reading frame 21##BC020611|CXorf21|80231|chromosome X open reading frame 21##NM_025159|CXorf21|80231|chromosome X open reading frame 21##HQ692832|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##BC011564|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_000475|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_177404|MAGEB1|4112|melanoma antigen family B, 1##BC013772|MAGEB1|4112|melanoma antigen family B, 1##BC042421|GK|2710|glycerol kinase##BC071595|GK|2710|glycerol kinase##NM_000167|GK|2710|glycerol kinase##NM_001128127|GK|2710|glycerol kinase##NM_001205019|GK|2710|glycerol kinase##NM_203391|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase##L13943|GK|2710|glycerol kinase##AK294938|GK|2710|glycerol kinase##AK294304|GK|2710|glycerol kinase##BX647604|GK|2710|glycerol kinase##AK308238|GK|2710|glycerol kinase##BC037549|GK|2710|glycerol kinase##DQ891580|GK|2710|glycerol kinase##DQ894773|GK|2710|glycerol kinase	0.020995	
chr20	4979062	4979209	reg1029096.p1	5.620	+	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	-174941	-	AY154472 NM_170774	-183367	-	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	-276601	+	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	3025	-	BC013112 AF164142 NM_203327	11790	-	TSC_hg19_v1_chr20_-_5093685 AY359115 BC015113 AK055700 BC110408 BC011990 BC009768 BC009770 AF161392 BC009769 AK315606 BC066317 AK309823 BC070212 NM_001009923 NM_001009924 NM_001009925 NM_014145	114480	-	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##BC013112|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AF164142|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_203327|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AY359115|C20orf30|29058|chromosome 20 open reading frame 30##BC015113|C20orf30|29058|chromosome 20 open reading frame 30##AK055700|C20orf30|29058|chromosome 20 open reading frame 30##BC110408|C20orf30|29058|chromosome 20 open reading frame 30##BC011990|C20orf30|29058|chromosome 20 open reading frame 30##BC009768|C20orf30|29058|chromosome 20 open reading frame 30##BC009770|C20orf30|29058|chromosome 20 open reading frame 30##AF161392|C20orf30|29058|chromosome 20 open reading frame 30##BC009769|C20orf30|29058|chromosome 20 open reading frame 30##AK315606|C20orf30|29058|chromosome 20 open reading frame 30##BC066317|C20orf30|29058|chromosome 20 open reading frame 30##AK309823|C20orf30|29058|chromosome 20 open reading frame 30##BC070212|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009923|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009924|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009925|C20orf30|29058|chromosome 20 open reading frame 30##NM_014145|C20orf30|29058|chromosome 20 open reading frame 30	0.0	
chr21	44531006	44531120	reg1022391.p1	5.620	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-3379	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-3438	-	L19501 BC007257 NM_001178008 NM_001178009	-34616	-	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	58111	+	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	314926	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	315932	-	NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##L19501|CBS|875|cystathionine-beta-synthase##BC007257|CBS|875|cystathionine-beta-synthase##NM_001178008|CBS|875|cystathionine-beta-synthase##NM_001178009|CBS|875|cystathionine-beta-synthase##NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1	0.984935	CTCF.p2:20:0.985
chr22	42793468	42793649	reg1021090.p3	5.620	+	BC038245 TSC_hg19_v1_chr22_-_42765218	-28356	-	AB527391 NM_005650 NM_181492	-182181	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	-266677	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	34823	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	122209	-	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	122256	-	NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)	0.0	
chr6	35309937	35310112	reg1000475.p1	5.620	+	TSC_hg19_v1_chr6_+_35265672 BC007702	-44357	+	AK093613 AY241694 NM_022047 TSC_hg19_v1_chr6_+_35265594 AK314756 BC017504 AB527549 AJ276095	-44410	+	TSC_hg19_v1_chr6_+_35227490 AK294605 BC002549 NM_003427 BC000133 M91592	-82497	+	TSC_hg19_v1_chr6_+_35310334 NM_001171818 NM_001171819 NM_001171820 NM_006238 NM_177435	302	+	TSC_hg19_v1_chr6_+_35310339 AK122614	315	+	TSC_hg19_v1_chr6_+_35310375 AK304878 AB099507 AK296425 AK291661 BC002715 BC007578	352	+	BC007702|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AK093613|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AY241694|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##NM_022047|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AK314756|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##BC017504|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AJ276095|DEF6|50619|differentially expressed in FDCP 6 homolog (mouse)##AK294605|ZNF76|7629|zinc finger protein 76##BC002549|ZNF76|7629|zinc finger protein 76##NM_003427|ZNF76|7629|zinc finger protein 76##BC000133|ZNF76|7629|zinc finger protein 76##M91592|ZNF76|7629|zinc finger protein 76##NM_001171818|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_001171819|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_001171820|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_006238|PPARD|5467|peroxisome proliferator-activated receptor delta##NM_177435|PPARD|5467|peroxisome proliferator-activated receptor delta##AK122614|PPARD|5467|peroxisome proliferator-activated receptor delta##AK304878|PPARD|5467|peroxisome proliferator-activated receptor delta##AB099507|PPARD|5467|peroxisome proliferator-activated receptor delta##AK296425|PPARD|5467|peroxisome proliferator-activated receptor delta##AK291661|PPARD|5467|peroxisome proliferator-activated receptor delta##BC002715|PPARD|5467|peroxisome proliferator-activated receptor delta##BC007578|PPARD|5467|peroxisome proliferator-activated receptor delta	0.0	
chr10	402662	402774	reg1026286.p2	5.619	+	BC012586 X86098 NM_001202467 NM_001202468 AB385196 DQ335452 DQ335453 DQ335454 DQ335455 AK296427	-176772	+	TSC_hg19_v1_chr10_+_181412 BC091489 NM_001202464	-221298	+	NM_006624 NM_001202465 NM_001202466 NM_212479 TSC_hg19_v1_chr10_+_180423	-222305	+	AK096000 BC144473 AK296168 TSC_hg19_v1_chr10_+_696010 AK096013	293233	+	TSC_hg19_v1_chr10_-_735609 AB023151 BC063313 NM_014974	332973	-	BC131630 BC152443 D86971 NM_015155	528979	-	BC012586|ZMYND11|10771|zinc finger, MYND-type containing 11##X86098|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202467|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202468|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335452|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335453|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335454|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335455|ZMYND11|10771|zinc finger, MYND-type containing 11##AK296427|ZMYND11|10771|zinc finger, MYND-type containing 11##BC091489|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202464|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202465|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202466|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11##AK096000|C10orf108|414235|chromosome 10 open reading frame 108##AK296168|C10orf108|414235|chromosome 10 open reading frame 108##AK096013|C10orf108|414235|chromosome 10 open reading frame 108##AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##BC131630|LARP4B|23185|La ribonucleoprotein domain family, member 4B##BC152443|LARP4B|23185|La ribonucleoprotein domain family, member 4B##D86971|LARP4B|23185|La ribonucleoprotein domain family, member 4B##NM_015155|LARP4B|23185|La ribonucleoprotein domain family, member 4B	0.09178	
chr1	207738959	207739127	reg1025002.p1	5.619	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	-69465	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-111382	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-243938	+	NM_175710 BC109190 BC109191	79444	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	186350	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	186440	+	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein	0.997325	CTCF.p2:29:0.997
chr18	47637902	47638043	reg1027182.p1	5.619	+	TSC_hg19_v1_chr18_-_47376221 BC033527	-261783	-	TSC_hg19_v1_chr18_+_47340396 AK123464	-297581	+	TSC_hg19_v1_chr18_-_47340253 AK054673 NM_006111 AK314462	-297702	-	AB384567 AB032945 TSC_hg19_v1_chr18_-_47721518 AB290160 BC032511 NM_001080467	83400	-	AB527886 BC030606 NM_145020 AK302114	154860	-	AF078830 AF078831 AF078832 AF078833 EF488685 AB527669 NM_001204151	168401	-	BC033527|MYO5B|4645|myosin VB##AK054673|ACAA2|10449|acetyl-CoA acyltransferase 2##NM_006111|ACAA2|10449|acetyl-CoA acyltransferase 2##AK314462|ACAA2|10449|acetyl-CoA acyltransferase 2##AB032945|MYO5B|4645|myosin VB##AB290160|MYO5B|4645|myosin VB##BC032511|MYO5B|4645|myosin VB##NM_001080467|MYO5B|4645|myosin VB##BC030606|CCDC11|220136|coiled-coil domain containing 11##NM_145020|CCDC11|220136|coiled-coil domain containing 11##AK302114|CCDC11|220136|coiled-coil domain containing 11##AF078830|MBD1|4152|methyl-CpG binding domain protein 1##AF078831|MBD1|4152|methyl-CpG binding domain protein 1##AF078832|MBD1|4152|methyl-CpG binding domain protein 1##AF078833|MBD1|4152|methyl-CpG binding domain protein 1##EF488685|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204151|MBD1|4152|methyl-CpG binding domain protein 1	0.0	
chr18	52338653	52338778	reg1022664.p2	5.619	+	AK096425 NM_173629	-80326	+	BX640877 NM_173529	-453545	+	AB528241 AF480305 NM_139171	-457773	-	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	157023	+	AK058097 NM_001143829	286563	-	AF273051 TSC_hg19_v1_chr18_-_52626693 BC029508 NM_025214	287972	-	AK096425|C18orf26|284254|chromosome 18 open reading frame 26##NM_173629|C18orf26|284254|chromosome 18 open reading frame 26##BX640877|C18orf54|162681|chromosome 18 open reading frame 54##NM_173529|C18orf54|162681|chromosome 18 open reading frame 54##AF480305|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_139171|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family##AK058097|CCDC68|80323|coiled-coil domain containing 68##NM_001143829|CCDC68|80323|coiled-coil domain containing 68##AF273051|CCDC68|80323|coiled-coil domain containing 68##BC029508|CCDC68|80323|coiled-coil domain containing 68##NM_025214|CCDC68|80323|coiled-coil domain containing 68	0.999504	CTCF.p2:0:1.000
chr22	40592730	40592884	reg1022980.p1	5.619	+	TSC_hg19_v1_chr22_+_40573938 NM_001162501 NM_015088 AK296590 AK294519 AB029016	-18808	+	TSC_hg19_v1_chr22_+_40441403 BC028626	-151375	+	TSC_hg19_v1_chr22_+_40440774 NM_001024843	-151898	+	TSC_hg19_v1_chr22_+_40742532 NM_000026 NM_001123378 AF067853 AF067854 AK293722 CR456368 AK298187 AK291091 AK300705 BC000253 BC018881 AK225042 CU674104 AB462938 CU012935 CU013223 DQ893326 DQ896642 X65867 S60710	149725	+	TSC_hg19_v1_chr22_+_40766609 NM_015705 AK309400	173782	+	TSC_hg19_v1_chr22_+_40766619 AK295469	173812	+	NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B##NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B##AK296590|TNRC6B|23112|trinucleotide repeat containing 6B##AK294519|TNRC6B|23112|trinucleotide repeat containing 6B##AB029016|TNRC6B|23112|trinucleotide repeat containing 6B##BC028626|TNRC6B|23112|trinucleotide repeat containing 6B##NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B##NM_000026|ADSL|158|adenylosuccinate lyase##NM_001123378|ADSL|158|adenylosuccinate lyase##AF067853|ADSL|158|adenylosuccinate lyase##AF067854|ADSL|158|adenylosuccinate lyase##CR456368|ADSL|158|adenylosuccinate lyase##AK298187|ADSL|158|adenylosuccinate lyase##AK291091|ADSL|158|adenylosuccinate lyase##AK300705|ADSL|158|adenylosuccinate lyase##BC000253|ADSL|158|adenylosuccinate lyase##BC018881|ADSL|158|adenylosuccinate lyase##AK225042|ADSL|158|adenylosuccinate lyase##CU012935|ADSL|158|adenylosuccinate lyase##CU013223|ADSL|158|adenylosuccinate lyase##DQ893326|ADSL|158|adenylosuccinate lyase##DQ896642|ADSL|158|adenylosuccinate lyase##X65867|ADSL|158|adenylosuccinate lyase##S60710|ADSL|158|adenylosuccinate lyase##NM_015705|SGSM3|27352|small G protein signaling modulator 3##AK309400|SGSM3|27352|small G protein signaling modulator 3##AK295469|SGSM3|27352|small G protein signaling modulator 3	0.0	
chr7	107519940	107520072	reg1027320.p1	5.619	+	L02785 BC025671 TSC_hg19_v1_chr7_-_107443671 BX640837 NM_000111	-76352	-	TSC_hg19_v1_chr7_+_107384589 AK026762 AK307992 BC130529 BC130531 BC144176	-135425	+	AK293352 NM_024814	-135728	+	AK294146 NM_000108 TSC_hg19_v1_chr7_+_107531614 AK312346 AK295080 AK225301	11594	+	J03490 TSC_hg19_v1_chr7_+_107531617 AK297508	11610	+	AK300077 TSC_hg19_v1_chr7_+_107531630 AK225289 AK310220 AB209703 BC018648 BC018696 J03620 AB529125 CU676276	11650	+	L02785|SLC26A3|1811|solute carrier family 26, member 3##BC025671|SLC26A3|1811|solute carrier family 26, member 3##BX640837|SLC26A3|1811|solute carrier family 26, member 3##NM_000111|SLC26A3|1811|solute carrier family 26, member 3##AK026762|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK307992|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC130529|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC130531|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC144176|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK293352|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##NM_024814|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK294146|DLD|1738|dihydrolipoamide dehydrogenase##NM_000108|DLD|1738|dihydrolipoamide dehydrogenase##AK312346|DLD|1738|dihydrolipoamide dehydrogenase##AK295080|DLD|1738|dihydrolipoamide dehydrogenase##AK225301|DLD|1738|dihydrolipoamide dehydrogenase##J03490|DLD|1738|dihydrolipoamide dehydrogenase##AK297508|DLD|1738|dihydrolipoamide dehydrogenase##AK300077|DLD|1738|dihydrolipoamide dehydrogenase##AK225289|DLD|1738|dihydrolipoamide dehydrogenase##AK310220|DLD|1738|dihydrolipoamide dehydrogenase##AB209703|DLD|1738|dihydrolipoamide dehydrogenase##BC018648|DLD|1738|dihydrolipoamide dehydrogenase##BC018696|DLD|1738|dihydrolipoamide dehydrogenase##J03620|DLD|1738|dihydrolipoamide dehydrogenase	0.974916	CTCF.p2:-1:0.975
chr8	103567482	103567663	reg1024122.p1	5.619	+	NM_024410 AK315276 BC104456 BC104457	-3711	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-142661	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-316399	-	BC011538 NM_001032282 S81439	98520	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	100360	-	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	308787	-	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1	0.0	
chr9	80592268	80592377	reg1023418.p1	5.619	+	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	-329091	-	AK027023 TSC_hg19_v1_chr9_+_79968352	-623974	+	TSC_hg19_v1_chr9_+_79792474 AB054005	-799814	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	53862	-	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	258708	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	319736	+	BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1	0.074485	
chrUn_gl000230	4508	4615	reg1024126.p1	5.619	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.986346	CTCF.p2:20:0.986
chrX	130896876	130897024	reg1021608.p1	5.619	+	BC137050 AB529233 NM_001004486	-218952	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-473538	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-473688	-	TSC_hg19_v1_chrX_-_130964633 AK097911	67701	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	260371	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	260690	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.1013	
chr1	59205800	59205976	reg1001384.p2	5.618	+	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-40136	-	TSC_hg19_v1_chr1_-_59147727 BC017579	-58142	-	NM_002353	-162723	-	TSC_hg19_v1_chr1_-_59248287 BC009874	42477	-	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	43847	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	556724	+	BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_002353|TACSTD2|4070|tumor-associated calcium signal transducer 2##BC009874|JUN|3725|jun proto-oncogene##BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing	0.0	
chr1	102285767	102285880	reg1027729.p1	5.617	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-583253	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-583442	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-794390	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	176664	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	176967	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1210960	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.926546	CTCF.p2:5:0.927
chr11	65659374	65659538	reg1025127.p2	5.617	+	TSC_hg19_v1_chr11_+_65658143 BC008796 AK312109 U63825 AB464503 CU679113	-1279	+	NM_006848	-1582	+	TSC_hg19_v1_chr11_-_65655968 AF171944 AF171945 AF171946 AF250391 CR456749 EU176427 EU176765 AF010187 BC017448 AK293882 AK315976 AK223438 AK289562 AK296571 AK299159 AK309974 BC014388 NM_004214 NM_198897	-3518	-	CR542257 CR542278 AB463654 DQ891054 DQ892703 DQ893332 DQ894233 DQ896648 EU176469 CU677659 TSC_hg19_v1_chr11_-_65667855 S68214 X16707 AK222902 BC016648	8376	-	AK293297 TSC_hg19_v1_chr11_-_65667859	8402	-	TSC_hg19_v1_chr11_-_65667860 AK299050 AK313718 NM_005438	8492	-	BC008796|CCDC85B|11007|coiled-coil domain containing 85B##AK312109|CCDC85B|11007|coiled-coil domain containing 85B##U63825|CCDC85B|11007|coiled-coil domain containing 85B##NM_006848|CCDC85B|11007|coiled-coil domain containing 85B##AF171944|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF171945|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF171946|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF250391|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##CR456749|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##EU176427|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##EU176765|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF010187|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##BC017448|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK293882|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK315976|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK223438|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK289562|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK296571|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK299159|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK309974|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##BC014388|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##NM_004214|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##NM_198897|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##CR542257|FOSL1|8061|FOS-like antigen 1##CR542278|FOSL1|8061|FOS-like antigen 1##DQ891054|FOSL1|8061|FOS-like antigen 1##DQ892703|FOSL1|8061|FOS-like antigen 1##DQ893332|FOSL1|8061|FOS-like antigen 1##DQ894233|FOSL1|8061|FOS-like antigen 1##DQ896648|FOSL1|8061|FOS-like antigen 1##EU176469|FOSL1|8061|FOS-like antigen 1##X16707|FOSL1|8061|FOS-like antigen 1##AK222902|FOSL1|8061|FOS-like antigen 1##BC016648|FOSL1|8061|FOS-like antigen 1##AK293297|FOSL1|8061|FOS-like antigen 1##AK299050|FOSL1|8061|FOS-like antigen 1##AK313718|FOSL1|8061|FOS-like antigen 1##NM_005438|FOSL1|8061|FOS-like antigen 1	0.0	
chr1	34106798	34106923	reg1028886.p1	5.617	+	NM_145238 AK131405 TSC_hg19_v1_chr1_+_33938251 AK290195 BC008827 BC011404	-168609	+	TSC_hg19_v1_chr1_-_33896604 AJ242730	-210252	-	AB527842 AJ419231 BC130630 BC144121 NM_198040	-265693	-	AK097707 NM_145205	219215	+	TSC_hg19_v1_chr1_-_34630856 AB212622	524005	-	AY210418 NM_052896	524582	-	NM_145238|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK131405|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK290195|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC008827|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC011404|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AJ242730|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AJ419231|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC130630|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC144121|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##NM_198040|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AK097707|HMGB4|127540|high mobility group box 4##NM_145205|HMGB4|127540|high mobility group box 4##AB212622|CSMD2|114784|CUB and Sushi multiple domains 2##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2	0.746119	CTCF.p2:22:0.746
chr16	82664469	82664579	reg1024513.p1	5.617	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-3855	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	-3935	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	-4130	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	1177076	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	1177132	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	1268245	+	AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase	0.903822	CTCF.p2:-18:0.904
chr8	128738085	128738204	reg1025522.p2	5.617	+	DQ486513 NM_001159542	-310288	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-1167420	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-1167589	-	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	10181	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	10346	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	68639	+	DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)	0.861283	CTCF.p2:0:0.861
chr1	25190915	25191095	reg1025431.p1	5.616	+	TSC_hg19_v1_chr1_+_25071976 AF109196 AB463494 AM393644 CU680328 CR533501	-119000	+	TSC_hg19_v1_chr1_+_25071937 AK315051 AK301466 AK307142	-119072	+	NM_013943 TSC_hg19_v1_chr1_+_25071875 AL117424 AK001624 AK095959 BC012444 AF097330	-119174	+	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	65420	-	TSC_hg19_v1_chr1_-_25256761 AK301044	65734	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	65781	-	AF109196|CLIC4|25932|chloride intracellular channel 4##AM393644|CLIC4|25932|chloride intracellular channel 4##CR533501|CLIC4|25932|chloride intracellular channel 4##AK315051|CLIC4|25932|chloride intracellular channel 4##AK301466|CLIC4|25932|chloride intracellular channel 4##AK307142|CLIC4|25932|chloride intracellular channel 4##NM_013943|CLIC4|25932|chloride intracellular channel 4##AL117424|CLIC4|25932|chloride intracellular channel 4##AK001624|CLIC4|25932|chloride intracellular channel 4##AK095959|CLIC4|25932|chloride intracellular channel 4##BC012444|CLIC4|25932|chloride intracellular channel 4##AF097330|CLIC4|25932|chloride intracellular channel 4##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3	0.0	
chr13	107570479	107570601	reg1023899.p1	5.616	+	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	-350055	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	-383191	-	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-1451949	+	NM_001080396	948919	-	NM_002312 X83441	1296589	-	AK292419 AK314844 BC037491 NM_206937	1297335	-	BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A##NM_002312|LIG4|3981|ligase IV, DNA, ATP-dependent##X83441|LIG4|3981|ligase IV, DNA, ATP-dependent##AK292419|LIG4|3981|ligase IV, DNA, ATP-dependent##AK314844|LIG4|3981|ligase IV, DNA, ATP-dependent##BC037491|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_206937|LIG4|3981|ligase IV, DNA, ATP-dependent	0.99971	CTCF.p2:28:1.000
chr4	56050921	56051038	reg1026357.p2	5.616	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	-59225	-	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	-526845	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-955515	+	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	161437	+	TSC_hg19_v1_chr4_+_56212475 CU677982 CR457312	161505	+	TSC_hg19_v1_chr4_+_56261819 AK123358	210816	+	AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3##CR457312|SRD5A3|79644|steroid 5 alpha-reductase 3	0.99982	CTCF.p2:-6:1.000
chr17	38759430	38759527	reg1017478.p2	5.615	+	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	-37760	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	-101632	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-159659	+	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	44592	-	BC069196 TSC_hg19_v1_chr17_-_38804818	45318	-	BX538083 EU832123 EU832217 BC032815 AK092967 AK308598 NM_152349	61872	-	BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC069196|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BX538083|KRT222|125113|keratin 222##EU832123|KRT222|125113|keratin 222##EU832217|KRT222|125113|keratin 222##BC032815|KRT222|125113|keratin 222##AK308598|KRT222|125113|keratin 222##NM_152349|KRT222|125113|keratin 222	0.010177	
chr17	43309161	43309280	reg1020843.p1	5.615	+	TSC_hg19_v1_chr17_+_43299284 AY278319 NM_005892 BC111564	-9860	+	AK056946 NM_144608	-70957	+	TSC_hg19_v1_chr17_+_43225936 BC006460	-83285	+	AK096807 TSC_hg19_v1_chr17_-_43319268	9976	-	TSC_hg19_v1_chr17_+_43325300 AK311429	16084	+	BC028124 AF433663 AK302184 AK058143 NM_152343	30235	-	AY278319|FMNL1|752|formin-like 1##NM_005892|FMNL1|752|formin-like 1##BC111564|FMNL1|752|formin-like 1##AK056946|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##NM_144608|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##BC006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK311429|LOC100133991|100133991|uncharacterized LOC100133991##BC028124|C17orf46|124783|chromosome 17 open reading frame 46##AF433663|C17orf46|124783|chromosome 17 open reading frame 46##AK302184|C17orf46|124783|chromosome 17 open reading frame 46##AK058143|C17orf46|124783|chromosome 17 open reading frame 46##NM_152343|C17orf46|124783|chromosome 17 open reading frame 46	0.99242	CTCF.p2:12:0.992
chr8	125936987	125937106	reg1023603.p1	5.615	+	TSC_hg19_v1_chr8_-_125740689 AF086645 NM_014751	-196323	-	EF560715 TSC_hg19_v1_chr8_-_125740463 AK027015	-196601	-	TSC_hg19_v1_chr8_-_125716430 U50573	-220614	-	NM_152412 BX537876 AK095321 BC130515 BC130517	48502	+	NM_003129 TSC_hg19_v1_chr8_+_126010746 AK301792 BX647605	73687	+	TSC_hg19_v1_chr8_+_126010748 BX647400	73730	+	AF086645|MTSS1|9788|metastasis suppressor 1##NM_014751|MTSS1|9788|metastasis suppressor 1##EF560715|MTSS1|9788|metastasis suppressor 1##AK027015|MTSS1|9788|metastasis suppressor 1##U50573|MTSS1|9788|metastasis suppressor 1##NM_152412|ZNF572|137209|zinc finger protein 572##BX537876|ZNF572|137209|zinc finger protein 572##AK095321|ZNF572|137209|zinc finger protein 572##BC130515|ZNF572|137209|zinc finger protein 572##BC130517|ZNF572|137209|zinc finger protein 572##NM_003129|SQLE|6713|squalene epoxidase##AK301792|SQLE|6713|squalene epoxidase##BX647605|SQLE|6713|squalene epoxidase##BX647400|SQLE|6713|squalene epoxidase	0.891093	CTCF.p2:17:0.891
chr9	115687476	115687602	reg1024893.p1	5.615	+	CU690566 BC048285 AK314414 AK055571 AF242557 NM_033051	-34463	-	TSC_hg19_v1_chr9_+_115631819 AK129991	-55674	+	TSC_hg19_v1_chr9_+_115513056 NM_001012994	-174448	+	AK095843 NM_001101338	86932	-	AK301275 HQ258583 AF022158 NM_003408 BC126390 BC144145	131463	-	TSC_hg19_v1_chr9_+_115913250 NM_001860	225702	+	BC048285|SLC46A2|57864|solute carrier family 46, member 2##AK314414|SLC46A2|57864|solute carrier family 46, member 2##AK055571|SLC46A2|57864|solute carrier family 46, member 2##AF242557|SLC46A2|57864|solute carrier family 46, member 2##NM_033051|SLC46A2|57864|solute carrier family 46, member 2##AK129991|SNX30|401548|sorting nexin family member 30##NM_001012994|SNX30|401548|sorting nexin family member 30##AK095843|ZNF883|169834|zinc finger protein 883##NM_001101338|ZNF883|169834|zinc finger protein 883##AK301275|ZFP37|7539|zinc finger protein 37 homolog (mouse)##HQ258583|ZFP37|7539|zinc finger protein 37 homolog (mouse)##AF022158|ZFP37|7539|zinc finger protein 37 homolog (mouse)##NM_003408|ZFP37|7539|zinc finger protein 37 homolog (mouse)##BC126390|ZFP37|7539|zinc finger protein 37 homolog (mouse)##BC144145|ZFP37|7539|zinc finger protein 37 homolog (mouse)##NM_001860|SLC31A2|1318|solute carrier family 31 (copper transporters), member 2	0.954459	CTCF.p2:-3:0.954
chrX	99668359	99668469	reg1024505.p1	5.615	+	EF676096 NM_001105243 NM_001184880 NM_020766 TSC_hg19_v1_chrX_-_99665272	-3141	-	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	-3529444	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	-3728460	+	NM_022144 AF191770 BC034030 AF291656 AF234259 AY358706 AB055421 AB590911 CU689814	171487	+	BT006977 CR457115 AB527646 DQ890668 DQ893849 TSC_hg19_v1_chrX_-_99891804 AF053453 AK299176 AF133426 AK309581 AY358825 AB097016 AF043906 U84895 BC012389 NM_003270 AK075072 AB209876 AK315773 AK300852	223354	-	NM_014467 TSC_hg19_v1_chrX_+_99899195 AK075462 AF060567 AF393649	230818	+	EF676096|PCDH19|57526|protocadherin 19##NM_001105243|PCDH19|57526|protocadherin 19##NM_001184880|PCDH19|57526|protocadherin 19##NM_020766|PCDH19|57526|protocadherin 19##NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_022144|TNMD|64102|tenomodulin##AF191770|TNMD|64102|tenomodulin##BC034030|TNMD|64102|tenomodulin##AF291656|TNMD|64102|tenomodulin##AF234259|TNMD|64102|tenomodulin##AY358706|TNMD|64102|tenomodulin##AB055421|TNMD|64102|tenomodulin##BT006977|TSPAN6|7105|tetraspanin 6##CR457115|TSPAN6|7105|tetraspanin 6##DQ890668|TSPAN6|7105|tetraspanin 6##DQ893849|TSPAN6|7105|tetraspanin 6##AF053453|TSPAN6|7105|tetraspanin 6##AK299176|TSPAN6|7105|tetraspanin 6##AF133426|TSPAN6|7105|tetraspanin 6##AK309581|TSPAN6|7105|tetraspanin 6##AY358825|TSPAN6|7105|tetraspanin 6##AB097016|TSPAN6|7105|tetraspanin 6##AF043906|TSPAN6|7105|tetraspanin 6##U84895|TSPAN6|7105|tetraspanin 6##BC012389|TSPAN6|7105|tetraspanin 6##NM_003270|TSPAN6|7105|tetraspanin 6##AK075072|TSPAN6|7105|tetraspanin 6##AB209876|TSPAN6|7105|tetraspanin 6##AK315773|TSPAN6|7105|tetraspanin 6##AK300852|TSPAN6|7105|tetraspanin 6##NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2	0.019393	
chr1	12661375	12661491	reg1026210.p2	5.614	+	TSC_hg19_v1_chr1_+_12403045 AK057675	-258363	+	TSC_hg19_v1_chr1_+_12290088 NM_015378 NM_018156 AJ608774 AJ608775 AL162331	-371326	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	-434322	+	DQ426869 DQ893006 DQ896252 CU678154 AF061741 AK222593 BC002730 TSC_hg19_v1_chr1_-_12677700 AK310202 AY358093 AK309282 AK312961 BX648476 NM_004753	16150	-	NM_001013630	43132	+	AK127828 NM_001103169 NM_001103170	114684	+	AK057675|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_015378|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_018156|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608774|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608775|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AL162331|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_001013630|AADACL4|343066|arylacetamide deacetylase-like 4##AK127828|AADACL3|126767|arylacetamide deacetylase-like 3##NM_001103169|AADACL3|126767|arylacetamide deacetylase-like 3##NM_001103170|AADACL3|126767|arylacetamide deacetylase-like 3	0.163466	
chr13	53726061	53726164	reg1026837.p1	5.614	+	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	-123200	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	-303337	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-412150	-	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3989004	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3995574	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	4002147	+	AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	0.992402	CTCF.p2:11:0.992
chr19	44284160	44284315	reg1027695.p1	5.614	+	TSC_hg19_v1_chr19_-_44259117 NM_019108	-25109	-	TSC_hg19_v1_chr19_-_44259074 AK022948	-25144	-	TSC_hg19_v1_chr19_-_44259063 AK309830 BC008869 AL136606	-25217	-	AB128983 AB128984 AB128985 AF000972 AF022150 BT007426 CU677271 DQ891493 DQ894684 BC015337 AF395661 TSC_hg19_v1_chr19_-_44285137 AF033021	838	-	TSC_hg19_v1_chr19_-_44285437 AF022797 NM_002250	1203	-	CU691254 AY358719 BC057816 AK301693 NM_001031749	22331	-	NM_019108|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK022948|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK309830|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC008869|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL136606|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AB128983|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128984|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128985|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF000972|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF022150|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##BT007426|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##DQ891493|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##DQ894684|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##BC015337|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF395661|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF033021|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF022797|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##NM_002250|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AY358719|LYPD5|284348|LY6/PLAUR domain containing 5##BC057816|LYPD5|284348|LY6/PLAUR domain containing 5##AK301693|LYPD5|284348|LY6/PLAUR domain containing 5##NM_001031749|LYPD5|284348|LY6/PLAUR domain containing 5	0.17429	
chr6	120299580	120299695	reg1023857.p2	5.614	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-628716	-	BX538186 AK091682 AX747126 NM_001100411	-829291	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-899729	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	1356006	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	1457188	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	2421058	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.438387	CTCF.p2:-6:0.438
chr12	103572571	103572734	reg1025939.p2	5.613	+	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-220560	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-221131	+	L47726 NM_000277 U49897	-261272	-	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	317094	-	AY311388 AJ295695 NM_017564 AB052958	408409	+	AB032773 TSC_hg19_v1_chr12_-_104234857	662172	-	DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3	0.057191	
chr15	20829567	20829688	reg1031140.p1	5.613	+	NM_001145004	-82514	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-118190	-	None	None	None	NM_207355 BC066981	242351	-	NM_207355 BC066981	1253511	-	BC136985 NM_001004719	1538850	+	NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2	0.345796	CTCF.p2:11:0.346
chr16	23848413	23848545	reg1025787.p2	5.613	+	AB587511 EU832791 GQ129253 TSC_hg19_v1_chr16_+_23847512	-973	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	-1084	+	TSC_hg19_v1_chr16_+_23847321 BC036472	-1147	+	BC037899 NM_006539 AK095553	418395	+	AK055453 TSC_hg19_v1_chr16_+_24267474	418995	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	419219	+	EU832791|PRKCB|5579|protein kinase C, beta##GQ129253|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	0.999011	CTCF.p2:-8:0.999
chr18	54745151	54745320	reg1024865.p1	5.613	+	TSC_hg19_v1_chr18_+_54424445 BC050352	-320787	+	TSC_hg19_v1_chr18_+_54318593 AK057141 NM_015285 NM_052834 AB011113 BC150282	-426629	+	TSC_hg19_v1_chr18_-_54305956 BC001156 AF003938 NM_004786	-439321	-	AK127964 TSC_hg19_v1_chr18_+_54814333 BC021740 BC035018 AK301799	69104	+	AB208996 NM_015879	274485	+	TSC_hg19_v1_chr18_+_55102810 NM_004852 Y18198 BC108925 BC108926	357630	+	BC050352|WDR7|23335|WD repeat domain 7##AK057141|WDR7|23335|WD repeat domain 7##NM_015285|WDR7|23335|WD repeat domain 7##NM_052834|WDR7|23335|WD repeat domain 7##AB011113|WDR7|23335|WD repeat domain 7##BC150282|WDR7|23335|WD repeat domain 7##BC001156|TXNL1|9352|thioredoxin-like 1##AF003938|TXNL1|9352|thioredoxin-like 1##NM_004786|TXNL1|9352|thioredoxin-like 1##AK127964|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC021740|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC035018|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK301799|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_004852|ONECUT2|9480|one cut homeobox 2##Y18198|ONECUT2|9480|one cut homeobox 2##BC108925|ONECUT2|9480|one cut homeobox 2##BC108926|ONECUT2|9480|one cut homeobox 2	0.060574	
chr3	142839859	142839992	reg1011122.p2	5.612	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-1274	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-119495	+	TSC_hg19_v1_chr3_+_142682794 BC062727	-157095	+	BC067737 TSC_hg19_v1_chr3_+_142895211	55246	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	727342	-	NM_173552 AK315082	850727	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC062727|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58	0.038985	
chr3	185072198	185072281	reg1006576.p2	5.612	+	AK302951 TSC_hg19_v1_chr3_+_185046682 BC031677	-25548	+	TSC_hg19_v1_chr3_+_185000783 NM_001242314 NM_001242317 AK297646 BC036593 AK312714 BC015996	-71490	+	BC038948 BC110460 L07077 AK301521 TSC_hg19_v1_chr3_-_184971838 AK223460 AK291798 BC011030 BC030982 NM_001166415 NM_001966	-100389	-	BC026249 NM_004721 AK296961 AB001872 BC111726	8693	+	TSC_hg19_v1_chr3_-_185216824 EU831805 EU831882 AK313954 BC019884 BC008043 BX647928 AY358547 AK172748 AK290878 NM_080652	144460	-	CU687970 TSC_hg19_v1_chr3_-_185270374 AK298380 AY036912 AY093498 EF186228 EF186229 BC064941 AK122651 NM_139248	198089	-	AK302951|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC031677|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_001242314|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_001242317|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK297646|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC036593|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK312714|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC015996|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##EU831805|TMEM41A|90407|transmembrane protein 41A##EU831882|TMEM41A|90407|transmembrane protein 41A##AK313954|TMEM41A|90407|transmembrane protein 41A##BC019884|TMEM41A|90407|transmembrane protein 41A##BC008043|TMEM41A|90407|transmembrane protein 41A##BX647928|TMEM41A|90407|transmembrane protein 41A##AY358547|TMEM41A|90407|transmembrane protein 41A##AK172748|TMEM41A|90407|transmembrane protein 41A##AK290878|TMEM41A|90407|transmembrane protein 41A##NM_080652|TMEM41A|90407|transmembrane protein 41A##AK298380|LIPH|200879|lipase, member H##AY036912|LIPH|200879|lipase, member H##AY093498|LIPH|200879|lipase, member H##EF186228|LIPH|200879|lipase, member H##EF186229|LIPH|200879|lipase, member H##BC064941|LIPH|200879|lipase, member H##AK122651|LIPH|200879|lipase, member H##NM_139248|LIPH|200879|lipase, member H	0.462006	CTCF.p2:-3:0.462
chr12	18473109	18473219	reg1024902.p1	5.611	+	NM_004570	-58691	+	AK026308 BC042888 NM_024730	-230082	-	AF258348 BC017777 AB044746 AK095595 AK308826 NM_001001395 NM_001243609	-1712123	-	AF532185 NM_033123 AK314516 AY035866 AK292279	417789	-	BC016745 NM_033328 AB053259 AK058174 CU677705	417956	+	TSC_hg19_v1_chr12_+_19282701 NM_001143821 NM_001190860 NM_019012 BC070174 BC044245 AK297391 AK295151 AK026344 AF302150 BC127091 BC127092 AB051473	809401	+	NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide##AK026308|RERGL|79785|RERG/RAS-like##BC042888|RERGL|79785|RERG/RAS-like##NM_024730|RERGL|79785|RERG/RAS-like##AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1##BC016745|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##NM_033328|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AB053259|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##AK058174|CAPZA3|93661|capping protein (actin filament) muscle Z-line, alpha 3##NM_001143821|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##NM_001190860|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##NM_019012|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC070174|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC044245|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AK297391|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AK295151|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AK026344|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AF302150|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC127091|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##BC127092|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5##AB051473|PLEKHA5|54477|pleckstrin homology domain containing, family A member 5	0.082711	
chr17	55629801	55629902	reg1024434.p2	5.611	+	AK093888 AX748353 NM_170721	-295478	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-295878	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-466708	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	297553	-	AK000746 NM_017949	350898	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	402825	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.357923	CTCF.p2:-52:0.299
chr1	91995583	91995698	reg1027348.p1	5.611	+	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	-28959	+	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	-29221	+	TSC_hg19_v1_chr1_-_91870367 AB058637 AK294754 AK302582 AB058636 AB204867 NM_001017975	-125268	-	AK291345 BC126116 BC136295 BC143869 TSC_hg19_v1_chr1_-_92351559	355877	-	AK225799 TSC_hg19_v1_chr1_-_92351709 NM_001195683 NM_003243	356107	-	L07594 NM_001195684	375918	-	NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB058637|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK294754|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK302582|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB058636|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB204867|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001017975|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK291345|TGFBR3|7049|transforming growth factor, beta receptor III##BC126116|TGFBR3|7049|transforming growth factor, beta receptor III##BC136295|TGFBR3|7049|transforming growth factor, beta receptor III##BC143869|TGFBR3|7049|transforming growth factor, beta receptor III##AK225799|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195683|TGFBR3|7049|transforming growth factor, beta receptor III##NM_003243|TGFBR3|7049|transforming growth factor, beta receptor III##L07594|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195684|TGFBR3|7049|transforming growth factor, beta receptor III	0.672156	CTCF.p2:-34:0.672
chr12	99119783	99119892	reg1025655.p1	5.610	+	AK307509 TSC_hg19_v1_chr12_+_99039067 AF013263 NM_001160 NM_013229 NM_181861 NM_181868 NM_181869	-80840	+	TSC_hg19_v1_chr12_-_99038755 AK123069	-81032	-	TSC_hg19_v1_chr12_-_99038567 CU691338 BC058933 AK055613 BC107572 BC051372 AJ539425 AJ539426 AJ539427 BC029415 NM_153687 NM_201612 NM_201613	-81329	-	AY356353 AK315954 AM980945 AK294994 TSC_hg19_v1_chr12_-_99288638 AK295988 NM_001204065 NM_001204079 NM_001204080 NM_001204081	168750	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	428720	-	AK294191 NM_001204067	429030	-	AK307509|APAF1|317|apoptotic peptidase activating factor 1##AF013263|APAF1|317|apoptotic peptidase activating factor 1##NM_001160|APAF1|317|apoptotic peptidase activating factor 1##NM_013229|APAF1|317|apoptotic peptidase activating factor 1##NM_181861|APAF1|317|apoptotic peptidase activating factor 1##NM_181868|APAF1|317|apoptotic peptidase activating factor 1##NM_181869|APAF1|317|apoptotic peptidase activating factor 1##AK123069|IKBIP|121457|IKBKB interacting protein##BC058933|IKBIP|121457|IKBKB interacting protein##AK055613|IKBIP|121457|IKBKB interacting protein##BC107572|IKBIP|121457|IKBKB interacting protein##BC051372|IKBIP|121457|IKBKB interacting protein##AJ539425|IKBIP|121457|IKBKB interacting protein##AJ539426|IKBIP|121457|IKBKB interacting protein##AJ539427|IKBIP|121457|IKBKB interacting protein##BC029415|IKBIP|121457|IKBKB interacting protein##NM_153687|IKBIP|121457|IKBKB interacting protein##NM_201612|IKBIP|121457|IKBKB interacting protein##NM_201613|IKBIP|121457|IKBKB interacting protein##AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B	0.0	
chr2	200850453	200850602	reg1023028.p1	5.610	+	TSC_hg19_v1_chr2_+_200820507 BC017959 CU676122	-30011	+	BX647677 NM_001039693	-30069	-	TSC_hg19_v1_chr2_-_200820204 HQ258367 AK298977 BC025758 AK095272 BC132835 BC136837 BC144420 BX648265 AK293064	-30315	-	NM_015535 AK290496	320082	+	AL110124 AY450394 AK090867 TSC_hg19_v1_chr2_+_201171276 NM_001100422 NM_001100424 AK002064 AK090703 AK314561 BC010848 BC018736 NM_001100423	320572	+	TSC_hg19_v1_chr2_+_201171424 AF193059 BC065817	320922	+	BC017959|C2orf47|79568|chromosome 2 open reading frame 47##BX647677|TYW5|129450|tRNA-yW synthesizing protein 5##NM_001039693|TYW5|129450|tRNA-yW synthesizing protein 5##HQ258367|TYW5|129450|tRNA-yW synthesizing protein 5##AK298977|TYW5|129450|tRNA-yW synthesizing protein 5##BC025758|TYW5|129450|tRNA-yW synthesizing protein 5##AK095272|TYW5|129450|tRNA-yW synthesizing protein 5##BC132835|TYW5|129450|tRNA-yW synthesizing protein 5##BC136837|TYW5|129450|tRNA-yW synthesizing protein 5##BC144420|TYW5|129450|tRNA-yW synthesizing protein 5##BX648265|TYW5|129450|tRNA-yW synthesizing protein 5##AK293064|TYW5|129450|tRNA-yW synthesizing protein 5##NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AF193059|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC065817|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	0.875118	CTCF.p2:3:0.875
chrX	130936892	130937041	reg1013116.p1	5.610	+	BC137050 AB529233 NM_001004486	-258968	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-513554	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-513704	-	TSC_hg19_v1_chrX_-_130964633 AK097911	27685	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	220355	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	220674	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.0	
chr1	208070755	208070822	reg1040859.p1	5.609	+	BX640941 TSC_hg19_v1_chr1_-_208059392	-11465	-	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	-145305	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	-145395	+	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	13595	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	13769	-	TSC_hg19_v1_chr1_-_208417635 NM_025179	346861	-	BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##NM_025179|PLXNA2|5362|plexin A2	0.0	
chr13	45885333	45885446	reg1026671.p1	5.609	+	AK290675 NM_198404	-110215	-	TSC_hg19_v1_chr13_+_45694647 BC001771 X16901 AB527978 EU831971 EU832064 BT019525 X59745	-190671	+	TSC_hg19_v1_chr13_+_45694638 NM_004128 AK291545	-190775	+	TSC_hg19_v1_chr13_-_45914246 L13806 CU692614	28893	-	AY334563 CR457036 CU680324 TSC_hg19_v1_chr13_-_45915253	29848	-	BC012431 TSC_hg19_v1_chr13_-_45915280 X64899 BC040008 NM_003295 X16064 AF072098 BC007842 BC003352 BC052333	29903	-	AK290675|KCTD4|386618|potassium channel tetramerisation domain containing 4##NM_198404|KCTD4|386618|potassium channel tetramerisation domain containing 4##BC001771|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##X16901|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##EU831971|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##EU832064|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##BT019525|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##X59745|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##L13806|TPT1|7178|tumor protein, translationally-controlled 1##AY334563|TPT1|7178|tumor protein, translationally-controlled 1##CR457036|TPT1|7178|tumor protein, translationally-controlled 1##BC012431|TPT1|7178|tumor protein, translationally-controlled 1##X64899|TPT1|7178|tumor protein, translationally-controlled 1##BC040008|TPT1|7178|tumor protein, translationally-controlled 1##NM_003295|TPT1|7178|tumor protein, translationally-controlled 1##X16064|TPT1|7178|tumor protein, translationally-controlled 1##BC007842|TPT1|7178|tumor protein, translationally-controlled 1##BC003352|TPT1|7178|tumor protein, translationally-controlled 1##BC052333|TPT1|7178|tumor protein, translationally-controlled 1	0.894091	CTCF.p2:-18:0.894
chr17	75396540	75396720	reg1000635.p1	5.609	+	AB023208 NM_001113494 AJ312322	-24461	+	TSC_hg19_v1_chr17_+_75369418 AK304143	-27205	+	TSC_hg19_v1_chr17_+_75369236 AJ312319 NM_001113493	-27377	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	50015	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	50152	+	AK299828 TSC_hg19_v1_chr17_+_75447450	50759	+	AB023208|SEPT9|10801|septin 9##NM_001113494|SEPT9|10801|septin 9##AJ312322|SEPT9|10801|septin 9##AK304143|SEPT9|10801|septin 9##AJ312319|SEPT9|10801|septin 9##NM_001113493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9	0.0	
chr4	119345389	119345505	reg1023762.p1	5.609	+	TSC_hg19_v1_chr4_-_119273910 AJ001531 BC007761 NM_003619	-71522	-	TSC_hg19_v1_chr4_+_119199912 BC017993 BC039555	-145530	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	-389872	+	TSC_hg19_v1_chr4_+_119512929 AK024248	167487	+	TSC_hg19_v1_chr4_+_119606557 AK055555 AB046847 BC006565 BC007449 NM_020961 AB384254 CU675451	261164	+	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	411780	-	AJ001531|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC007761|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##NM_003619|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC017993|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##BC039555|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK024248|LOC729218|729218|uncharacterized LOC729218##AK055555|METTL14|57721|methyltransferase like 14##AB046847|METTL14|57721|methyltransferase like 14##BC006565|METTL14|57721|methyltransferase like 14##BC007449|METTL14|57721|methyltransferase like 14##NM_020961|METTL14|57721|methyltransferase like 14##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)	0.168658	
chr8	90084025	90084128	reg1024535.p1	5.609	+	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	-744330	-	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	-1197817	-	AK093121 AX747937 BC117326 BC117328 NM_173538	-2205403	+	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	685954	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	686208	+	AF061326 NM_004337	830019	+	AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF061326|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_004337|OSGIN2|734|oxidative stress induced growth inhibitor family member 2	0.963805	CTCF.p2:-6:0.964
chr9	135674529	135674626	reg1030450.p2	5.609	+	AF142328 NM_012204 TSC_hg19_v1_chr9_+_135545875 BC094774 BC011619 BC022787 BC104755 BC112245 AB529214	-128721	+	AF335567 AF335568 AF335569 AF427339 AK027484 NM_022779 NM_138620	-128790	-	TSC_hg19_v1_chr9_+_135545447 BC060821	-129159	+	TSC_hg19_v1_chr9_+_135753719 BC012940	79191	+	BC037402 BC050576 NM_152572	79603	-	AK075259 AJ011375 NM_018956	79709	+	AF142328|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##NM_012204|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC094774|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC011619|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC022787|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC104755|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC112245|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##AF335567|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF335568|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF335569|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF427339|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK027484|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##NM_022779|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##NM_138620|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC060821|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC012940|C9orf9|11092|chromosome 9 open reading frame 9##BC037402|AK8|158067|adenylate kinase 8##BC050576|AK8|158067|adenylate kinase 8##NM_152572|AK8|158067|adenylate kinase 8##AK075259|C9orf9|11092|chromosome 9 open reading frame 9##AJ011375|C9orf9|11092|chromosome 9 open reading frame 9##NM_018956|C9orf9|11092|chromosome 9 open reading frame 9	0.504072	CTCF.p2:-13:0.504
chr12	5281051	5281165	reg1021052.p1	5.608	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	-127989	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	-262048	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	-362693	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	260168	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	322230	+	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	773366	-	M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2	0.997735	CTCF.p2:-3:0.998
chr3	127542208	127542295	reg1027918.p2	5.608	+	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	-109	-	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	-821	-	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-150434	+	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	92067	+	NM_207335 AB590042 AM393308 AM393457	99651	+	TSC_hg19_v1_chr3_+_127771248 AK027423 AK074706 NM_013336	228936	+	AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##NM_207335|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393308|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393457|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AK027423|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AK074706|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##NM_013336|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	0.0	
chr6	133608063	133608170	reg1028073.p1	5.608	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	-45584	+	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	-45625	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	-472397	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	602138	+	TSC_hg19_v1_chr6_+_134210277 AF035718 AF047419 BC025697	602154	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	665248	+	BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)##AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21##AF035718|TCF21|6943|transcription factor 21##AF047419|TCF21|6943|transcription factor 21##BC025697|TCF21|6943|transcription factor 21##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1	0.908231	CTCF.p2:-12:0.908
chr6	227889	228070	reg1010029.p2	5.608	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	64106	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	64518	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	163785	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.0	
chr14	76670067	76670247	reg1013996.p2	5.607	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-51851	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-51880	+	TSC_hg19_v1_chr14_+_76618258 NM_017926 NM_017972 BC058032	-51901	+	NM_004452	167532	+	TSC_hg19_v1_chr14_+_77227817 AK094330	557643	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	558298	+	AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_017926|C14orf118|55668|chromosome 14 open reading frame 118##NM_017972|C14orf118|55668|chromosome 14 open reading frame 118##BC058032|C14orf118|55668|chromosome 14 open reading frame 118##NM_004452|ESRRB|2103|estrogen-related receptor beta##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1	0.0	
chr17	65078423	65078528	reg1021946.p1	5.607	+	NM_000727 L07738 AK313852 BC113486 BC113492 BC069493 HQ258641	-37764	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	-117586	+	BC101633 NM_145811 BC101607 AF361351 AF458898	-205055	+	D29677 AK310217 TSC_hg19_v1_chr17_-_65241302 BC130582 BC144083	162814	-	TSC_hg19_v1_chr17_-_65241313 NM_014877	162837	-	CU676364 AB384721 DQ892821 DQ896067 TSC_hg19_v1_chr17_-_65362658 AK222679 BC065826	284173	-	NM_000727|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##L07738|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##AK313852|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113486|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113492|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC069493|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##HQ258641|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##D29677|HELZ|9931|helicase with zinc finger##AK310217|HELZ|9931|helicase with zinc finger##BC130582|HELZ|9931|helicase with zinc finger##BC144083|HELZ|9931|helicase with zinc finger##NM_014877|HELZ|9931|helicase with zinc finger##DQ892821|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##DQ896067|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK222679|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##BC065826|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	0.23051	CTCF.p2:30:0.231
chr17	65375194	65375374	reg1010018.p3	5.607	+	BC007905 NM_012417 NM_181671	-1361	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-1696	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-1875	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	338766	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	446418	+	AK293224 TSC_hg19_v1_chr17_+_65822221	446933	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.0	
chr18	20938745	20938926	reg1005835.p1	5.607	+	BC037218 NM_138375	-203047	+	EF028204 NM_001100619	-223109	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-425020	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	79036	-	AK057292 NM_003831	93951	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	94411	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.0	
chr2	220035996	220036122	reg1025635.p1	5.607	+	DQ891019 DQ894199 CU688862 AK091919 BC030243 AK298256 AK298277 AK055730 NM_001144889 NM_001144890 NM_144712	-1298	-	TSC_hg19_v1_chr2_-_220025558 BC012732 AK022672 AJ972687 BC030986 NM_024782	-10520	-	BC136587 BC136588 NM_002181	-110822	-	CR457401 CU674686 AK311656 TSC_hg19_v1_chr2_-_220041648 BC001393 AK314975 AK075274 BC012821 AY007160 NM_015680	5568	-	AF151815 TSC_hg19_v1_chr2_-_220042871	6757	-	TSC_hg19_v1_chr2_+_220042946 NM_024293	6865	+	DQ891019|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##DQ894199|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##BC030243|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298256|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298277|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK055730|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144889|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144890|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_144712|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##BC012732|NHEJ1|79840|nonhomologous end-joining factor 1##AK022672|NHEJ1|79840|nonhomologous end-joining factor 1##AJ972687|NHEJ1|79840|nonhomologous end-joining factor 1##BC030986|NHEJ1|79840|nonhomologous end-joining factor 1##NM_024782|NHEJ1|79840|nonhomologous end-joining factor 1##BC136587|IHH|3549|Indian hedgehog##BC136588|IHH|3549|Indian hedgehog##NM_002181|IHH|3549|Indian hedgehog##CR457401|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC001393|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK314975|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK075274|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC012821|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AY007160|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##NM_015680|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AF151815|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##NM_024293|FAM134A|79137|family with sequence similarity 134, member A	0.693907	CTCF.p2:-4:0.694
chr15	75090834	75090975	reg1024186.p1	5.606	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	-16048	+	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	-16479	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-49712	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	14268	+	AK024055 NM_001030005 AB072900 BC018026 AY286501	28086	+	TSC_hg19_v1_chr15_-_75135477 AB528889 CU691158 AK075047 BC056423 AK299380	44549	-	X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like##AK024055|CPLX3|594855|complexin 3##NM_001030005|CPLX3|594855|complexin 3##AB072900|CPLX3|594855|complexin 3##BC018026|CPLX3|594855|complexin 3##AY286501|CPLX3|594855|complexin 3##AK075047|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC056423|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK299380|ULK3|25989|unc-51-like kinase 3 (C. elegans)	0.814486	CTCF.p2:-1:0.696
chr17	41158705	41158819	reg1023270.p1	5.606	+	BC002588 TSC_hg19_v1_chr17_+_41150484	-8282	+	TSC_hg19_v1_chr17_+_41150435 AK124148 NM_000988 BC098560 AK311792	-8331	+	BC014873 TSC_hg19_v1_chr17_+_41132589 AK303115 AL831813 AY189284	-26168	+	NM_005533 TSC_hg19_v1_chr17_+_41158831 BC001356 AB463796 DQ892598 DQ895826 U72882	90	+	BC001913 BT007369 HQ258013 BC014279 TSC_hg19_v1_chr17_-_41174385 AK298536 AK097072 BC008725 BC068489 BC015041 BC090858	15599	-	TSC_hg19_v1_chr17_-_41174403 AK000237	15641	-	BC002588|RPL27|6155|ribosomal protein L27##AK124148|RPL27|6155|ribosomal protein L27##NM_000988|RPL27|6155|ribosomal protein L27##BC098560|RPL27|6155|ribosomal protein L27##AK311792|RPL27|6155|ribosomal protein L27##BC014873|RUNDC1|146923|RUN domain containing 1##AL831813|RUNDC1|146923|RUN domain containing 1##AY189284|RUNDC1|146923|RUN domain containing 1##NM_005533|IFI35|3430|interferon-induced protein 35##BC001356|IFI35|3430|interferon-induced protein 35##DQ892598|IFI35|3430|interferon-induced protein 35##DQ895826|IFI35|3430|interferon-induced protein 35##U72882|IFI35|3430|interferon-induced protein 35##BC001913|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BT007369|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##HQ258013|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC014279|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##AK298536|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##AK097072|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC008725|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC068489|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC015041|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC090858|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##AK000237|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)	0.344553	CTCF.p2:-16:0.345
chr2	27309428	27309518	reg1020621.p3	5.606	+	TSC_hg19_v1_chr2_+_27301693 BC007530 BC017284 BC136279 AF088916 AL050138	-7622	+	NM_007046 BC142638 AK075517 AK307539 BC090957 BC142688 TSC_hg19_v1_chr2_+_27301565	-7972	+	TSC_hg19_v1_chr2_-_27294519 AL049447 BC105283 NM_001134693	-14940	-	NM_000221 NM_006488 TSC_hg19_v1_chr2_+_27309615 BC006233	183	+	TSC_hg19_v1_chr2_+_27310090 BX648873 AK130033 AK223075 X78678 AB528158 AM393286 CR456801	630	+	AK302185 NM_001166241	24493	-	BC007530|EMILIN1|11117|elastin microfibril interfacer 1##BC017284|EMILIN1|11117|elastin microfibril interfacer 1##BC136279|EMILIN1|11117|elastin microfibril interfacer 1##AF088916|EMILIN1|11117|elastin microfibril interfacer 1##AL050138|EMILIN1|11117|elastin microfibril interfacer 1##NM_007046|EMILIN1|11117|elastin microfibril interfacer 1##BC142638|EMILIN1|11117|elastin microfibril interfacer 1##AK075517|EMILIN1|11117|elastin microfibril interfacer 1##AK307539|EMILIN1|11117|elastin microfibril interfacer 1##BC090957|EMILIN1|11117|elastin microfibril interfacer 1##BC142688|EMILIN1|11117|elastin microfibril interfacer 1##AL049447|OST4|100128731|oligosaccharyltransferase 4 homolog (S. cerevisiae)##BC105283|OST4|100128731|oligosaccharyltransferase 4 homolog (S. cerevisiae)##NM_001134693|OST4|100128731|oligosaccharyltransferase 4 homolog (S. cerevisiae)##NM_000221|KHK|3795|ketohexokinase (fructokinase)##NM_006488|KHK|3795|ketohexokinase (fructokinase)##BC006233|KHK|3795|ketohexokinase (fructokinase)##BX648873|KHK|3795|ketohexokinase (fructokinase)##AK130033|KHK|3795|ketohexokinase (fructokinase)##AK223075|KHK|3795|ketohexokinase (fructokinase)##X78678|KHK|3795|ketohexokinase (fructokinase)##AM393286|KHK|3795|ketohexokinase (fructokinase)##CR456801|KHK|3795|ketohexokinase (fructokinase)##AK302185|CGREF1|10669|cell growth regulator with EF-hand domain 1##NM_001166241|CGREF1|10669|cell growth regulator with EF-hand domain 1	0.99456	CTCF.p2:24:0.995
chr8	38084247	38084366	reg1025766.p1	5.606	+	TSC_hg19_v1_chr8_+_38034377 AF111116	-49918	+	TSC_hg19_v1_chr8_+_38034355 BC038505 AK304072 AK314020 AF095194	-49981	+	TSC_hg19_v1_chr8_-_38034212 NM_014462	-50077	-	NM_001164234 NM_015214 TSC_hg19_v1_chr8_+_38089102 AK056525	4777	+	TSC_hg19_v1_chr8_+_38089233 AK125904 NM_001164232	5011	+	BC033025 AK292118 TSC_hg19_v1_chr8_-_38126733 AF212238 BC106014 NM_001102559 NM_001102560 NM_032483	42410	-	AF111116|BAG4|9530|BCL2-associated athanogene 4##BC038505|BAG4|9530|BCL2-associated athanogene 4##AK304072|BAG4|9530|BCL2-associated athanogene 4##AK314020|BAG4|9530|BCL2-associated athanogene 4##AF095194|BAG4|9530|BCL2-associated athanogene 4##NM_014462|LSM1|27257|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001164234|DDHD2|23259|DDHD domain containing 2##NM_015214|DDHD2|23259|DDHD domain containing 2##AK056525|DDHD2|23259|DDHD domain containing 2##AK125904|DDHD2|23259|DDHD domain containing 2##NM_001164232|DDHD2|23259|DDHD domain containing 2##BC033025|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##AK292118|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##AF212238|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##BC106014|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##NM_001102559|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##NM_001102560|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##NM_032483|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	0.928087	CTCF.p2:-13:0.532	CTCF.p2:-14:0.396
chr9	39559510	39559605	reg1026159.p1	5.606	+	AK302569 NM_001040065 NM_001085452 BC146855	-203872	+	AB385498 AK294281 AB051501 BC132737 BC144130 AK056833 NM_033655	-271377	-	TSC_hg19_v1_chr9_-_38620602 BC056266	-938934	-	AK302569 NM_001040065 NM_001085452 BC146855	325404	+	NM_001083124	1140733	+	AK057375 AK292150 NM_033160	1232529	-	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##AK294281|CNTNAP3|79937|contactin associated protein-like 3##AB051501|CNTNAP3|79937|contactin associated protein-like 3##BC132737|CNTNAP3|79937|contactin associated protein-like 3##BC144130|CNTNAP3|79937|contactin associated protein-like 3##AK056833|CNTNAP3|79937|contactin associated protein-like 3##NM_033655|CNTNAP3|79937|contactin associated protein-like 3##BC056266|ANKRD18A|253650|ankyrin repeat domain 18A##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001083124|FAM75A3|727830|family with sequence similarity 75, member A3##AK057375|ZNF658|26149|zinc finger protein 658##AK292150|ZNF658|26149|zinc finger protein 658##NM_033160|ZNF658|26149|zinc finger protein 658	0.397076	CTCF.p2:-11:0.397
chr18	52763648	52763797	reg1027380.p1	5.605	+	AF273051 TSC_hg19_v1_chr18_-_52626693 BC029508 NM_025214	-137035	-	AK058097 NM_001143829	-138444	-	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	-267984	+	FR748222 NM_001243236	206060	-	M74718 FR748220 FR748221 AK300038 NM_001243234 NM_001243235	225280	-	FR748209 M74720 AB209741 TSC_hg19_v1_chr18_-_53068920 AK300636	305116	-	AF273051|CCDC68|80323|coiled-coil domain containing 68##BC029508|CCDC68|80323|coiled-coil domain containing 68##NM_025214|CCDC68|80323|coiled-coil domain containing 68##AK058097|CCDC68|80323|coiled-coil domain containing 68##NM_001143829|CCDC68|80323|coiled-coil domain containing 68##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family##FR748222|TCF4|6925|transcription factor 4##NM_001243236|TCF4|6925|transcription factor 4##M74718|TCF4|6925|transcription factor 4##FR748220|TCF4|6925|transcription factor 4##FR748221|TCF4|6925|transcription factor 4##AK300038|TCF4|6925|transcription factor 4##NM_001243234|TCF4|6925|transcription factor 4##NM_001243235|TCF4|6925|transcription factor 4##FR748209|TCF4|6925|transcription factor 4##AB209741|TCF4|6925|transcription factor 4##AK300636|TCF4|6925|transcription factor 4	0.950641	CTCF.p2:-14:0.951
chr2	29867967	29868098	reg1023822.p1	5.605	+	TSC_hg19_v1_chr2_+_29338370 BC013862 NM_024692 AL834443	-529677	+	NM_001029883	-570906	-	AK296977 NM_199280	-663869	+	EU788003 EU788004 EU788005 EU788006 EU788007 EU788008 EU788009 EU788010 FJ838786 FJ838787 U62540 TSC_hg19_v1_chr2_-_30144453 AK296218 NM_004304	276422	-	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	501738	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	501801	+	BC013862|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_024692|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##AL834443|CLIP4|79745|CAP-GLY domain containing linker protein family, member 4##NM_001029883|C2orf71|388939|chromosome 2 open reading frame 71##AK296977|FAM179A|165186|family with sequence similarity 179, member A##NM_199280|FAM179A|165186|family with sequence similarity 179, member A##EU788003|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788004|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788005|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788006|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788007|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788008|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788009|ALK|238|anaplastic lymphoma receptor tyrosine kinase##EU788010|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838786|ALK|238|anaplastic lymphoma receptor tyrosine kinase##FJ838787|ALK|238|anaplastic lymphoma receptor tyrosine kinase##U62540|ALK|238|anaplastic lymphoma receptor tyrosine kinase##AK296218|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_004304|ALK|238|anaplastic lymphoma receptor tyrosine kinase##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)	0.995543	CTCF.p2:-19:0.966
chr3	122025283	122025399	reg1023380.p2	5.605	+	NM_001178065 U20760	-122161	+	NM_000388 U20759	-122812	+	NM_006889 NM_176892 U04343	-228619	+	NM_005213 AK291308 BC010379 X05978 CR456914	18733	+	BC019231 BC109378 TSC_hg19_v1_chr3_-_122102079 BC054051 BC062725 NM_001017928	76736	-	NM_014367 AK026030 BC010896 BC015060 AF201944 AF107495 AF250321 TSC_hg19_v1_chr3_+_122103076 AK293994 AF191020	77727	+	NM_001178065|CASR|846|calcium-sensing receptor##U20760|CASR|846|calcium-sensing receptor##NM_000388|CASR|846|calcium-sensing receptor##U20759|CASR|846|calcium-sensing receptor##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule##NM_005213|CSTA|1475|cystatin A (stefin A)##AK291308|CSTA|1475|cystatin A (stefin A)##BC010379|CSTA|1475|cystatin A (stefin A)##X05978|CSTA|1475|cystatin A (stefin A)##CR456914|CSTA|1475|cystatin A (stefin A)##BC109378|CCDC58|131076|coiled-coil domain containing 58##BC054051|CCDC58|131076|coiled-coil domain containing 58##BC062725|CCDC58|131076|coiled-coil domain containing 58##NM_001017928|CCDC58|131076|coiled-coil domain containing 58##NM_014367|FAM162A|26355|family with sequence similarity 162, member A##AK026030|FAM162A|26355|family with sequence similarity 162, member A##BC010896|FAM162A|26355|family with sequence similarity 162, member A##BC015060|FAM162A|26355|family with sequence similarity 162, member A##AF201944|FAM162A|26355|family with sequence similarity 162, member A##AF107495|FAM162A|26355|family with sequence similarity 162, member A##AF250321|FAM162A|26355|family with sequence similarity 162, member A##AK293994|FAM162A|26355|family with sequence similarity 162, member A##AF191020|FAM162A|26355|family with sequence similarity 162, member A	0.494739	CTCF.p2:0:0.495
chr18	50906568	50906698	reg1026769.p1	5.604	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-1039520	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-1040092	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-2182593	-	TSC_hg19_v1_chr18_-_51690988 AL110266	784359	-	AF072246 TSC_hg19_v1_chr18_-_51750614	843904	-	TSC_hg19_v1_chr18_-_51750997 BC032638	844332	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	0.011275	
chr12	103352237	103352388	reg1027906.p2	5.603	+	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-220	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-791	+	L47726 NM_000277 U49897	-40932	-	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	537434	-	AY311388 AJ295695 NM_017564 AB052958	628749	+	AB032773 TSC_hg19_v1_chr12_-_104234857	882512	-	DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3	0.032202	
chr13	23331807	23331919	reg1023914.p2	5.603	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-1086715	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-1153503	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-1153554	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	423252	+	TSC_hg19_v1_chr13_-_23949652 AK125458	617787	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	675977	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.038167	
chr17	71244000	71244125	reg1027195.p1	5.603	+	BC005005 TSC_hg19_v1_chr17_+_71229423	-14672	+	TSC_hg19_v1_chr17_+_71228800 AY163812 NM_001100621 NM_001100622 NM_017941 AL136740 AK000728	-15256	+	TSC_hg19_v1_chr17_+_71228596 AK292838	-15468	+	BC157870 NM_001129885	13956	-	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	64078	-	NM_001144952	396164	-	BC005005|C17orf80|55028|chromosome 17 open reading frame 80##AY163812|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100621|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100622|C17orf80|55028|chromosome 17 open reading frame 80##NM_017941|C17orf80|55028|chromosome 17 open reading frame 80##AL136740|C17orf80|55028|chromosome 17 open reading frame 80##AK000728|C17orf80|55028|chromosome 17 open reading frame 80##AK292838|C17orf80|55028|chromosome 17 open reading frame 80##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2	0.0	
chr4	10745069	10745245	reg1022900.p1	5.603	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-58756	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-286147	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-626621	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	685375	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2740794	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2740818	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr16	30547134	30547262	reg1027322.p1	5.602	+	TSC_hg19_v1_chr16_-_30546234 AB209546 AK299308 AK054567 BC001361 NM_023931 AK316254	-1008	-	TSC_hg19_v1_chr16_-_30546003 AK292192	-1198	-	TSC_hg19_v1_chr16_-_30538096 AK295274	-9116	-	EU446557 BC008821 AK093992 AX748400 NM_001172679 NM_033410 TSC_hg19_v1_chr16_-_30569709	22410	-	EU446577 TSC_hg19_v1_chr16_-_30583034 BC018997	35824	-	NM_001024683 NM_145271	36529	-	AB209546|ZNF747|65988|zinc finger protein 747##AK054567|ZNF747|65988|zinc finger protein 747##BC001361|ZNF747|65988|zinc finger protein 747##NM_023931|ZNF747|65988|zinc finger protein 747##AK292192|ZNF747|65988|zinc finger protein 747##AK295274|ZNF768|79724|zinc finger protein 768##EU446557|ZNF764|92595|zinc finger protein 764##BC008821|ZNF764|92595|zinc finger protein 764##AK093992|ZNF764|92595|zinc finger protein 764##NM_001172679|ZNF764|92595|zinc finger protein 764##NM_033410|ZNF764|92595|zinc finger protein 764##EU446577|ZNF688|146542|zinc finger protein 688##BC018997|ZNF688|146542|zinc finger protein 688##NM_001024683|ZNF688|146542|zinc finger protein 688##NM_145271|ZNF688|146542|zinc finger protein 688	0.0	
chr10	64763952	64764080	reg1023943.p2	5.601	+	AK312813 NM_001136178	-185090	-	TSC_hg19_v1_chr10_-_64576127 NM_000399 NM_001136177 NM_001136179	-187869	-	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	-187919	-	TSC_hg19_v1_chr10_+_64893044 NM_030759 AK054957 AL136656	129015	+	TSC_hg19_v1_chr10_+_64893098 AF267866 AK301656 AK225257 AK225256 AY267839 AY267840 BC011707 AB590768 EU832288 EU832373	129130	+	BC126403 BC143722 TSC_hg19_v1_chr10_-_65029004 BX537954 NM_004241 BC108649	264899	-	AK312813|EGR2|1959|early growth response 2##NM_001136178|EGR2|1959|early growth response 2##NM_000399|EGR2|1959|early growth response 2##NM_001136177|EGR2|1959|early growth response 2##NM_001136179|EGR2|1959|early growth response 2##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2##NM_030759|NRBF2|29982|nuclear receptor binding factor 2##AK054957|NRBF2|29982|nuclear receptor binding factor 2##AL136656|NRBF2|29982|nuclear receptor binding factor 2##AF267866|NRBF2|29982|nuclear receptor binding factor 2##AK301656|NRBF2|29982|nuclear receptor binding factor 2##AK225257|NRBF2|29982|nuclear receptor binding factor 2##AK225256|NRBF2|29982|nuclear receptor binding factor 2##AY267839|NRBF2|29982|nuclear receptor binding factor 2##AY267840|NRBF2|29982|nuclear receptor binding factor 2##BC011707|NRBF2|29982|nuclear receptor binding factor 2##EU832288|NRBF2|29982|nuclear receptor binding factor 2##EU832373|NRBF2|29982|nuclear receptor binding factor 2##BC126403|JMJD1C|221037|jumonji domain containing 1C##BC143722|JMJD1C|221037|jumonji domain containing 1C##BX537954|JMJD1C|221037|jumonji domain containing 1C##NM_004241|JMJD1C|221037|jumonji domain containing 1C##BC108649|JMJD1C|221037|jumonji domain containing 1C	0.543076	CTCF.p2:0:0.543
chr13	43411220	43411352	reg1025049.p1	5.601	+	NM_182508 AK310859 AK098238 BC093659 BC112237	-55562	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	-262952	+	BC040889 NM_033012	-274415	+	CU692822 DQ892268 DQ895469 TSC_hg19_v1_chr13_-_43566378 AL831953 AF396928 BC023660 AK313877 AK292461 NM_001002264 NM_033255	155084	-	AF126743 AY248898 NM_013238	186063	+	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	186416	+	NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##DQ892268|EPSTI1|94240|epithelial stromal interaction 1 (breast)##DQ895469|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AL831953|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AF396928|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC023660|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK313877|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK292461|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_001002264|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_033255|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AF126743|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY248898|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_013238|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15	0.0	
chr15	71303971	71304105	reg1024864.p1	5.601	+	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	-119063	+	CU693296 DQ890927 DQ894089 EU176528 AL360202 TSC_hg19_v1_chr15_-_71184737 BC027857 BC072414 AK313472 NM_020147	-119347	-	CU675231 BC006082 BC009446 BC014018 AL833876 BC039153 TSC_hg19_v1_chr15_-_71146496 AK130092 AF443828 AF443829 AK002058 NM_018357 NM_197958	-157570	-	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	103833	-	NM_024817 BC140868	129772	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	535542	+	BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49##DQ890927|THAP10|56906|THAP domain containing 10##DQ894089|THAP10|56906|THAP domain containing 10##EU176528|THAP10|56906|THAP domain containing 10##AL360202|THAP10|56906|THAP domain containing 10##BC027857|THAP10|56906|THAP domain containing 10##BC072414|THAP10|56906|THAP domain containing 10##AK313472|THAP10|56906|THAP domain containing 10##NM_020147|THAP10|56906|THAP domain containing 10##BC006082|LARP6|55323|La ribonucleoprotein domain family, member 6##BC009446|LARP6|55323|La ribonucleoprotein domain family, member 6##BC014018|LARP6|55323|La ribonucleoprotein domain family, member 6##AL833876|LARP6|55323|La ribonucleoprotein domain family, member 6##BC039153|LARP6|55323|La ribonucleoprotein domain family, member 6##AK130092|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443828|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443829|LARP6|55323|La ribonucleoprotein domain family, member 6##AK002058|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_018357|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_197958|LARP6|55323|La ribonucleoprotein domain family, member 6##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4	0.071172	
chr2	221965522	221965702	reg1025730.p1	5.601	+	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-1473258	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-1503023	+	M13981 NM_002191 BC039076 BC006391 TSC_hg19_v1_chr2_+_220437031 BT006954 CU675381 DQ890602 DQ893773 M13144	-1528566	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	471398	-	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	1193408	-	AK057009 NM_153038 BC109388	1197300	+	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##M13981|INHA|3623|inhibin, alpha##NM_002191|INHA|3623|inhibin, alpha##BC039076|INHA|3623|inhibin, alpha##BC006391|INHA|3623|inhibin, alpha##BT006954|INHA|3623|inhibin, alpha##DQ890602|INHA|3623|inhibin, alpha##DQ893773|INHA|3623|inhibin, alpha##M13144|INHA|3623|inhibin, alpha##BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140	0.397896	CTCF.p2:20:0.398
chr8	103548113	103548254	reg1026366.p1	5.601	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-123272	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-297010	-	NM_001040630	-411049	-	NM_024410 AK315276 BC104456 BC104457	15678	+	BC011538 NM_001032282 S81439	117909	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	119749	-	AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001040630|NCALD|83988|neurocalcin delta##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10	0.0	
chr8	80647597	80647740	reg1026926.p1	5.601	+	AK292737 TSC_hg19_v1_chr8_+_80523376 BC006302 S82024 AB528346 BT020034 CR456833 DQ892719 DQ895968 CU675343	-124265	+	TSC_hg19_v1_chr8_+_80523354 AK297594 AK308557 AK297485	-124309	+	AK299500 TSC_hg19_v1_chr8_+_80523339	-124329	+	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	32329	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	294834	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	345361	-	AK292737|STMN2|11075|stathmin-like 2##BC006302|STMN2|11075|stathmin-like 2##S82024|STMN2|11075|stathmin-like 2##BT020034|STMN2|11075|stathmin-like 2##CR456833|STMN2|11075|stathmin-like 2##DQ892719|STMN2|11075|stathmin-like 2##DQ895968|STMN2|11075|stathmin-like 2##AK297594|STMN2|11075|stathmin-like 2##AK308557|STMN2|11075|stathmin-like 2##AK297485|STMN2|11075|stathmin-like 2##AK299500|STMN2|11075|stathmin-like 2##AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52	0.958247	CTCF.p2:-20:0.958
chr9	5186587	5186694	reg1023116.p2	5.601	+	AF135824 HQ258002 AF156094 NM_007179 BC126473 BC126475	-1027	-	TSC_hg19_v1_chr9_+_4985271 AF005216 NM_004972 AF058925	-201381	+	TSC_hg19_v1_chr9_+_4985085 AK292525	-201553	+	BC026254 AK291543 L34838 NM_002195 CU693182	44822	+	HQ258745 NM_005059 NM_134441 X00948 BC126415 BC126419	117954	-	X00949 DQ893302 DQ896468 BC005956 NM_006911	153168	-	AF135824|INSL6|11172|insulin-like 6##HQ258002|INSL6|11172|insulin-like 6##AF156094|INSL6|11172|insulin-like 6##NM_007179|INSL6|11172|insulin-like 6##BC126473|INSL6|11172|insulin-like 6##BC126475|INSL6|11172|insulin-like 6##AF005216|JAK2|3717|Janus kinase 2##NM_004972|JAK2|3717|Janus kinase 2##AF058925|JAK2|3717|Janus kinase 2##AK292525|JAK2|3717|Janus kinase 2##BC026254|INSL4|3641|insulin-like 4 (placenta)##AK291543|INSL4|3641|insulin-like 4 (placenta)##L34838|INSL4|3641|insulin-like 4 (placenta)##NM_002195|INSL4|3641|insulin-like 4 (placenta)##HQ258745|RLN2|6019|relaxin 2##NM_005059|RLN2|6019|relaxin 2##NM_134441|RLN2|6019|relaxin 2##X00948|RLN2|6019|relaxin 2##BC126415|RLN2|6019|relaxin 2##BC126419|RLN2|6019|relaxin 2##X00949|RLN1|6013|relaxin 1##DQ893302|RLN1|6013|relaxin 1##DQ896468|RLN1|6013|relaxin 1##BC005956|RLN1|6013|relaxin 1##NM_006911|RLN1|6013|relaxin 1	0.991235	CTCF.p2:-26:0.991
chrX	109399489	109399644	reg1023491.p1	5.601	+	TSC_hg19_v1_chrX_+_109246360 BC085605	-153211	+	TSC_hg19_v1_chrX_+_109246341 NM_032227 AK026332	-153226	+	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	-153696	+	CU687440 TSC_hg19_v1_chrX_-_109561311 AK314596 BC060813	161739	-	TSC_hg19_v1_chrX_-_109561314 BX648797 NM_001025580 NM_015365	161780	-	TSC_hg19_v1_chrX_-_109561428 AJ007014	161880	-	BC085605|TMEM164|84187|transmembrane protein 164##NM_032227|TMEM164|84187|transmembrane protein 164##AK026332|TMEM164|84187|transmembrane protein 164##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164##AK314596|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC060813|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BX648797|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001025580|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_015365|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1	0.999886	CTCF.p2:14:1.000
chr1	25158574	25158672	reg1022822.p2	5.600	+	TSC_hg19_v1_chr1_+_25071976 AF109196 AB463494 AM393644 CU680328 CR533501	-86618	+	TSC_hg19_v1_chr1_+_25071937 AK315051 AK301466 AK307142	-86690	+	NM_013943 TSC_hg19_v1_chr1_+_25071875 AL117424 AK001624 AK095959 BC012444 AF097330	-86792	+	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	97802	-	TSC_hg19_v1_chr1_-_25256761 AK301044	98116	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	98163	-	AF109196|CLIC4|25932|chloride intracellular channel 4##AM393644|CLIC4|25932|chloride intracellular channel 4##CR533501|CLIC4|25932|chloride intracellular channel 4##AK315051|CLIC4|25932|chloride intracellular channel 4##AK301466|CLIC4|25932|chloride intracellular channel 4##AK307142|CLIC4|25932|chloride intracellular channel 4##NM_013943|CLIC4|25932|chloride intracellular channel 4##AL117424|CLIC4|25932|chloride intracellular channel 4##AK001624|CLIC4|25932|chloride intracellular channel 4##AK095959|CLIC4|25932|chloride intracellular channel 4##BC012444|CLIC4|25932|chloride intracellular channel 4##AF097330|CLIC4|25932|chloride intracellular channel 4##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3	0.0	
chr1	32228371	32228468	reg1024091.p1	5.600	+	TSC_hg19_v1_chr1_-_32169619 NM_001856	-58726	-	M92642 TSC_hg19_v1_chr1_-_32169608	-58837	-	NM_012392	-117582	-	AB005298 NM_001703	1222	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	35821	-	TSC_hg19_v1_chr1_-_32264318 AK095829	35902	-	NM_001856|COL16A1|1307|collagen, type XVI, alpha 1##M92642|COL16A1|1307|collagen, type XVI, alpha 1##NM_012392|PEF1|553115|penta-EF-hand domain containing 1##AB005298|BAI2|576|brain-specific angiogenesis inhibitor 2##NM_001703|BAI2|576|brain-specific angiogenesis inhibitor 2##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1	0.167043	
chr13	24887728	24887853	reg1027352.p1	5.600	+	BC040438 NM_178540 AY358145	-4073	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	-42892	+	AK299981 AK301149 TSC_hg19_v1_chr13_+_24825840	-61955	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	199121	-	AK292968 NM_001185085 NM_001676	366758	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	450529	+	BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13##AK299981|SPATA13|221178|spermatogenesis associated 13##AK301149|SPATA13|221178|spermatogenesis associated 13##BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17	0.998654	CTCF.p2:11:0.999
chr3	167883360	167883532	reg1001157.p1	5.600	+	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	-70015	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	-70331	-	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-429957	+	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	980633	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	980916	-	BX640908 NM_001164000	982075	-	AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus	0.0	
chr5	172571987	172572114	reg1024077.p3	5.600	+	NM_001205 NM_013978 NM_013979 NM_013980 BC010959 TSC_hg19_v1_chr5_+_172571536 AF083957 AF083958 U15172 AB527856 CU679862 AF083956 AY216799	-554	+	TSC_hg19_v1_chr5_+_172484383 AK297424	-87667	+	TSC_hg19_v1_chr5_+_172483354 BX647768 NM_001168393 NM_001168394 NM_153607 AK300043 AY139008 BC041709 AY174896 AK124117 BX647573 AK291677	-88666	+	AB021133 CU693024 AB464641 DQ893313 DQ894104 DQ896627 BC025711 AK290615 AK307249 AK297844 AK307218 AK309495 U34962 AK307247 NM_001166175 NM_001166176 NM_004387	90149	-	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	183212	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	183393	-	NM_001205|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013978|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013979|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013980|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##BC010959|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083957|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083958|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##U15172|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083956|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AY216799|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AK297424|C5orf41|153222|chromosome 5 open reading frame 41##BX647768|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41##NM_153607|C5orf41|153222|chromosome 5 open reading frame 41##AK300043|C5orf41|153222|chromosome 5 open reading frame 41##AY139008|C5orf41|153222|chromosome 5 open reading frame 41##BC041709|C5orf41|153222|chromosome 5 open reading frame 41##AY174896|C5orf41|153222|chromosome 5 open reading frame 41##AK124117|C5orf41|153222|chromosome 5 open reading frame 41##BX647573|C5orf41|153222|chromosome 5 open reading frame 41##AK291677|C5orf41|153222|chromosome 5 open reading frame 41##AB021133|NKX2-5|1482|NK2 homeobox 5##DQ893313|NKX2-5|1482|NK2 homeobox 5##DQ894104|NKX2-5|1482|NK2 homeobox 5##DQ896627|NKX2-5|1482|NK2 homeobox 5##BC025711|NKX2-5|1482|NK2 homeobox 5##AK290615|NKX2-5|1482|NK2 homeobox 5##AK307249|NKX2-5|1482|NK2 homeobox 5##AK297844|NKX2-5|1482|NK2 homeobox 5##AK307218|NKX2-5|1482|NK2 homeobox 5##AK309495|NKX2-5|1482|NK2 homeobox 5##U34962|NKX2-5|1482|NK2 homeobox 5##AK307247|NKX2-5|1482|NK2 homeobox 5##NM_001166175|NKX2-5|1482|NK2 homeobox 5##NM_001166176|NKX2-5|1482|NK2 homeobox 5##NM_004387|NKX2-5|1482|NK2 homeobox 5##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2	0.999099	CTCF.p2:-6:0.999
chr7	128848676	128848796	reg1026392.p2	5.600	+	BC009989 NM_005631	-20024	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-153531	-	TSC_hg19_v1_chr7_-_128695168 BC009923	-153588	-	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	16093	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	159250	+	TSC_hg19_v1_chr7_+_129008062 AK025372	159352	+	BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3##NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2	0.0	
chr9	113798876	113799004	reg1028763.p1	5.600	+	NM_001166280 NM_001166281 NM_005592 AF006464 BC109098 BC109099 EU832778 EU832779 GQ129313	-367824	+	TSC_hg19_v1_chr9_-_113342011 AJ619977 AY243503 AK122605 BC030816 NM_153366	-456876	-	HQ258720 AF305830 BC130549 BC130551 BC144461 BC035743 NM_001003936	-698840	-	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	1472	-	AK298590 TSC_hg19_v1_chr9_-_113801086	2093	-	TSC_hg19_v1_chr9_-_113801481 AK290287	2562	-	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1##AK298590|LPAR1|1902|lysophosphatidic acid receptor 1##AK290287|LPAR1|1902|lysophosphatidic acid receptor 1	0.0	
chr1	188751496	188751629	reg1024482.p1	5.599	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-1953474	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-2102072	-	M33478 NM_002597	-2321335	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	1695173	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	3376041	+	AY643711 NM_001039152	3534559	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.935696	CTCF.p2:-4:0.936
chr17	16189229	16189361	reg1025857.p1	5.599	+	TSC_hg19_v1_chr17_+_16120523 NM_004278 AK292932 AK302523 AK296120 BC068197 AB017165 CU686621	-68789	+	BC056862 BC035748 BC142648 BC026028 AK307614 TSC_hg19_v1_chr17_-_16118849 AF044209 BC050594 BC068996 BC058511 BC107772 NM_006311	-70455	-	AB385422 AB028970 BC167431 NM_001190438 NM_001190440 AF087856 AF303586	-91377	-	TSC_hg19_v1_chr17_-_16256747 AF514992 NM_181716 BC052604	67467	-	TSC_hg19_v1_chr17_-_16256824 BC137486 BC137487	67538	-	TSC_hg19_v1_chr17_+_16284371 BC000379 NM_018955	95069	+	NM_004278|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK292932|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK302523|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK296120|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##BC068197|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AB017165|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##BC056862|NCOR1|9611|nuclear receptor corepressor 1##BC035748|NCOR1|9611|nuclear receptor corepressor 1##BC142648|NCOR1|9611|nuclear receptor corepressor 1##BC026028|NCOR1|9611|nuclear receptor corepressor 1##AK307614|NCOR1|9611|nuclear receptor corepressor 1##AF044209|NCOR1|9611|nuclear receptor corepressor 1##BC050594|NCOR1|9611|nuclear receptor corepressor 1##BC068996|NCOR1|9611|nuclear receptor corepressor 1##BC058511|NCOR1|9611|nuclear receptor corepressor 1##BC107772|NCOR1|9611|nuclear receptor corepressor 1##NM_006311|NCOR1|9611|nuclear receptor corepressor 1##AB028970|NCOR1|9611|nuclear receptor corepressor 1##BC167431|NCOR1|9611|nuclear receptor corepressor 1##NM_001190438|NCOR1|9611|nuclear receptor corepressor 1##NM_001190440|NCOR1|9611|nuclear receptor corepressor 1##AF087856|NCOR1|9611|nuclear receptor corepressor 1##AF303586|NCOR1|9611|nuclear receptor corepressor 1##AF514992|CENPV|201161|centromere protein V##NM_181716|CENPV|201161|centromere protein V##BC052604|CENPV|201161|centromere protein V##BC137486|CENPV|201161|centromere protein V##BC137487|CENPV|201161|centromere protein V##BC000379|UBB|7314|ubiquitin B##NM_018955|UBB|7314|ubiquitin B	0.0	
chr2	172117275	172117421	reg1025528.p1	5.599	+	AK090779 NM_001136554	-29525	-	TSC_hg19_v1_chr2_-_172017431 AK091975 NM_012290	-99849	-	TSC_hg19_v1_chr2_-_172017240 DQ890904 DQ894057 BC032657 D50927 AK292508 AF162666 AB004885	-100252	-	TSC_hg19_v1_chr2_-_172290501 AK124092 BC025250 AK024046	173178	-	TSC_hg19_v1_chr2_+_172290743 AK307877 NM_001164821 NM_025000	173414	+	TSC_hg19_v1_chr2_+_172290824 CR933646	173463	+	AK090779|TLK1|9874|tousled-like kinase 1##NM_001136554|TLK1|9874|tousled-like kinase 1##AK091975|TLK1|9874|tousled-like kinase 1##NM_012290|TLK1|9874|tousled-like kinase 1##DQ890904|TLK1|9874|tousled-like kinase 1##DQ894057|TLK1|9874|tousled-like kinase 1##BC032657|TLK1|9874|tousled-like kinase 1##D50927|TLK1|9874|tousled-like kinase 1##AK292508|TLK1|9874|tousled-like kinase 1##AF162666|TLK1|9874|tousled-like kinase 1##AB004885|TLK1|9874|tousled-like kinase 1##AK124092|METTL8|79828|methyltransferase like 8##BC025250|METTL8|79828|methyltransferase like 8##AK024046|METTL8|79828|methyltransferase like 8##AK307877|DCAF17|80067|DDB1 and CUL4 associated factor 17##NM_001164821|DCAF17|80067|DDB1 and CUL4 associated factor 17##NM_025000|DCAF17|80067|DDB1 and CUL4 associated factor 17##CR933646|DCAF17|80067|DDB1 and CUL4 associated factor 17	0.0	
chrX	37368693	37368805	reg1025546.p1	5.599	+	NM_000950 NM_001142395 NM_001173486 BC030786 TSC_hg19_v1_chrX_+_37208616 BC012608 NM_001173489 NM_001173490 AK312904 BC060833 AF009242 BC041591	-160161	+	NM_001013736	-342318	+	NM_001098843	-1114699	+	AK124915 NM_001170331 NM_198511 TSC_hg19_v1_chrX_+_37430917	62121	+	TSC_hg19_v1_chrX_+_37431024 BC093667 BC093669 BC143528	62282	+	AY534238 TSC_hg19_v1_chrX_+_37545043 BC036019 NM_021083 Z32684	176321	+	NM_000950|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001142395|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173486|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC030786|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC012608|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173489|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173490|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AK312904|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC060833|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AF009242|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC041591|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001013736|FAM47C|442444|family with sequence similarity 47, member C##NM_001098843|CXorf30|645090|chromosome X open reading frame 30##AK124915|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_001170331|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_198511|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##BC093667|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##BC093669|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##BC143528|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##AY534238|XK|7504|X-linked Kx blood group (McLeod syndrome)##BC036019|XK|7504|X-linked Kx blood group (McLeod syndrome)##NM_021083|XK|7504|X-linked Kx blood group (McLeod syndrome)##Z32684|XK|7504|X-linked Kx blood group (McLeod syndrome)	0.028226	
chrX	47488577	47488706	reg1026297.p1	5.599	+	TSC_hg19_v1_chrX_-_47479257 BC048799 NM_006950 NM_133499	-9371	-	TSC_hg19_v1_chrX_-_47479098 AB591026	-9529	-	TSC_hg19_v1_chrX_+_47441834 X03124 M12670 AK310206 AK311937 AK307222 M59906 X02598	-46818	+	AB590250 CU677429 DQ893460 DQ896310 TSC_hg19_v1_chrX_-_47489295 AK122955 BC015756 X57748 M83652 AK310695 NM_001145252	664	-	NM_002621	1062	-	BC048296 AB016193 TSC_hg19_v1_chrX_-_47509984 AK312984 AF000672 M25269	21286	-	BC048799|SYN1|6853|synapsin I##NM_006950|SYN1|6853|synapsin I##NM_133499|SYN1|6853|synapsin I##X03124|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M12670|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK310206|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK311937|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M59906|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X02598|TIMP1|7076|TIMP metallopeptidase inhibitor 1##DQ893460|CFP|5199|complement factor properdin##DQ896310|CFP|5199|complement factor properdin##AK122955|CFP|5199|complement factor properdin##BC015756|CFP|5199|complement factor properdin##X57748|CFP|5199|complement factor properdin##M83652|CFP|5199|complement factor properdin##AK310695|CFP|5199|complement factor properdin##NM_001145252|CFP|5199|complement factor properdin##NM_002621|CFP|5199|complement factor properdin##BC048296|ELK1|2002|ELK1, member of ETS oncogene family##AB016193|ELK1|2002|ELK1, member of ETS oncogene family##AK312984|ELK1|2002|ELK1, member of ETS oncogene family##AF000672|ELK1|2002|ELK1, member of ETS oncogene family##M25269|ELK1|2002|ELK1, member of ETS oncogene family	0.844735	CTCF.p2:36:0.845
chr18	50197398	50197536	reg1024915.p2	5.598	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-330354	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-330926	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-1473427	-	TSC_hg19_v1_chr18_-_51690988 AL110266	1493525	-	AF072246 TSC_hg19_v1_chr18_-_51750614	1553070	-	TSC_hg19_v1_chr18_-_51750997 BC032638	1553498	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	0.959296	CTCF.p2:5:0.959
chr19	37754082	37754176	reg1025059.p1	5.598	+	AK093182 AX747975 AY438646 NM_152604	-36764	+	TSC_hg19_v1_chr19_+_37709098 AK122892	-44981	+	BC051277 BC067088 BC080550 TSC_hg19_v1_chr19_-_37701446 AY147015 NM_152279	-52712	-	TSC_hg19_v1_chr19_+_37808794 AK056243	54696	+	TSC_hg19_v1_chr19_+_37825560 AK301601 AB013897 AK299969 AK223616 BC017256 NM_181786 BC010024	71426	+	TSC_hg19_v1_chr19_+_37862089 NM_032453 BC014325 AK301135 AK091585 AX747074	107952	+	AK093182|ZNF383|163087|zinc finger protein 383##AY438646|ZNF383|163087|zinc finger protein 383##NM_152604|ZNF383|163087|zinc finger protein 383##AK122892|ZNF383|163087|zinc finger protein 383##BC051277|ZNF585B|92285|zinc finger protein 585B##BC067088|ZNF585B|92285|zinc finger protein 585B##BC080550|ZNF585B|92285|zinc finger protein 585B##AY147015|ZNF585B|92285|zinc finger protein 585B##NM_152279|ZNF585B|92285|zinc finger protein 585B##AK056243|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AK301601|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AB013897|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AK299969|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AK223616|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##BC017256|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##NM_181786|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##BC010024|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##NM_032453|ZNF527|84503|zinc finger protein 527##BC014325|ZNF527|84503|zinc finger protein 527##AK301135|ZNF527|84503|zinc finger protein 527##AK091585|ZNF527|84503|zinc finger protein 527	0.975902	CTCF.p2:20:0.976
chr3	9824587	9824694	reg1026121.p1	5.598	+	BC106754 BC106755 TSC_hg19_v1_chr3_-_9811662 NM_003656	-12987	-	TSC_hg19_v1_chr3_-_9811623 L41816	-13016	-	TSC_hg19_v1_chr3_-_9811611 AK314917	-13038	-	BC001480 TSC_hg19_v1_chr3_-_9834130 AK000228	9468	-	NM_001024959 NM_001024960 TSC_hg19_v1_chr3_+_9834178	9547	+	TSC_hg19_v1_chr3_+_9834219 NM_001198793 NM_005718 AK024110	9582	+	BC106754|CAMK1|8536|calcium/calmodulin-dependent protein kinase I##BC106755|CAMK1|8536|calcium/calmodulin-dependent protein kinase I##NM_003656|CAMK1|8536|calcium/calmodulin-dependent protein kinase I##L41816|CAMK1|8536|calcium/calmodulin-dependent protein kinase I##AK314917|CAMK1|8536|calcium/calmodulin-dependent protein kinase I##BC001480|TADA3|10474|transcriptional adaptor 3##AK000228|TADA3|10474|transcriptional adaptor 3##NM_001024959|ARPC4|10093|actin related protein 2/3 complex, subunit 4, 20kDa##NM_001024960|ARPC4|10093|actin related protein 2/3 complex, subunit 4, 20kDa##NM_001198793|ARPC4-TTLL3|100526693|ARPC4-TTLL3 readthrough##NM_005718|ARPC4|10093|actin related protein 2/3 complex, subunit 4, 20kDa##AK024110|ARPC4-TTLL3|100526693|ARPC4-TTLL3 readthrough	0.048933	
chr6	17584763	17584878	reg1007838.p2	5.598	+	AK312362 NM_006366 TSC_hg19_v1_chr6_+_17393918 AL832154 AK295600 AK294215 AK293134 AK297538 AK308461 BC008481	-191038	+	AK055391 NM_153020 BC104808 BC104810 BC040928	-301816	+	NM_001143941	-302526	+	TSC_hg19_v1_chr6_+_17600620 NM_016255 AK296393 AK312814 AF097027 BC047881	15779	+	Z25535 AB384675 AK295644 BC052965 NM_005124 TSC_hg19_v1_chr6_-_17707139 AB210024	122082	-	AJ291578 AJ291579 BC127115 BC127116 AY014403 AY014404 TSC_hg19_v1_chr6_-_17987786	402940	-	AK312362|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##NM_006366|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AL832154|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK295600|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK294215|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK293134|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK297538|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK308461|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##BC008481|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK055391|RBM24|221662|RNA binding motif protein 24##NM_153020|RBM24|221662|RNA binding motif protein 24##BC104808|RBM24|221662|RNA binding motif protein 24##BC104810|RBM24|221662|RNA binding motif protein 24##BC040928|RBM24|221662|RNA binding motif protein 24##NM_001143941|RBM24|221662|RNA binding motif protein 24##NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1##AK296393|FAM8A1|51439|family with sequence similarity 8, member A1##AK312814|FAM8A1|51439|family with sequence similarity 8, member A1##AF097027|FAM8A1|51439|family with sequence similarity 8, member A1##BC047881|FAM8A1|51439|family with sequence similarity 8, member A1##Z25535|NUP153|9972|nucleoporin 153kDa##AK295644|NUP153|9972|nucleoporin 153kDa##BC052965|NUP153|9972|nucleoporin 153kDa##NM_005124|NUP153|9972|nucleoporin 153kDa##AB210024|NUP153|9972|nucleoporin 153kDa##AJ291578|KIF13A|63971|kinesin family member 13A##AJ291579|KIF13A|63971|kinesin family member 13A##BC127115|KIF13A|63971|kinesin family member 13A##BC127116|KIF13A|63971|kinesin family member 13A##AY014403|KIF13A|63971|kinesin family member 13A##AY014404|KIF13A|63971|kinesin family member 13A	0.699189	CTCF.p2:-6:0.699
chr14	67886982	67887078	reg1022502.p1	5.597	+	TSC_hg19_v1_chr14_-_67878872 BC001226	-8159	-	BC008056 AB528314 DQ891238 DQ894423 TSC_hg19_v1_chr14_-_67878843 AF228603 NM_016445	-8219	-	AB587562 DQ892151 DQ895347 TSC_hg19_v1_chr14_+_67831578	-55499	+	NM_182526 TSC_hg19_v1_chr14_-_67982162 AK090706 AX746582	95080	-	AK307428 NM_020715 TSC_hg19_v1_chr14_+_68000028 AB033026 BC146787	112943	+	BT006804 CU678574 BC071849 BC004100 L19783 AK314108 AK293584 NM_004569	179937	-	BC001226|PLEK2|26499|pleckstrin 2##BC008056|PLEK2|26499|pleckstrin 2##DQ891238|PLEK2|26499|pleckstrin 2##DQ894423|PLEK2|26499|pleckstrin 2##AF228603|PLEK2|26499|pleckstrin 2##NM_016445|PLEK2|26499|pleckstrin 2##DQ892151|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##DQ895347|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##NM_182526|TMEM229B|161145|transmembrane protein 229B##AK090706|TMEM229B|161145|transmembrane protein 229B##AK307428|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##NM_020715|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##AB033026|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##BC146787|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##BT006804|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC071849|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC004100|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##L19783|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##AK314108|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##NM_004569|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H	0.527434	CTCF.p2:3:0.527
chr1	59281923	59282101	reg1026450.p3	5.597	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-32277	-	TSC_hg19_v1_chr1_-_59248287 BC009874	-33647	-	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-116260	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	480600	+	NM_001244714 AK054842	493741	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	998640	+	BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##BC009874|JUN|3725|jun proto-oncogene##BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)	0.0	
chr9	136269130	136269273	reg1027860.p1	5.597	+	TSC_hg19_v1_chr9_+_136243236 BC036504 NM_153710 AK131533 AK131545	-25923	+	AK294947 TSC_hg19_v1_chr9_+_136243210	-26038	+	NM_033161 TSC_hg19_v1_chr9_-_136242971 AK315488	-26210	-	CU679283 DQ891911 DQ895096 AM392617 TSC_hg19_v1_chr9_-_136283131 AK025493 BC071691 AK310164 BC009274 AK314333 AK315904 AK304547 AL136894	13858	-	TSC_hg19_v1_chr9_-_136283157 AF273304 AF295774 NM_020385	13959	-	AK295982 TSC_hg19_v1_chr9_-_136283306	14099	-	BC036504|C9orf96|169436|chromosome 9 open reading frame 96##NM_153710|C9orf96|169436|chromosome 9 open reading frame 96##AK131533|C9orf96|169436|chromosome 9 open reading frame 96##AK131545|C9orf96|169436|chromosome 9 open reading frame 96##AK294947|C9orf96|169436|chromosome 9 open reading frame 96##NM_033161|SURF4|6836|surfeit 4##AK315488|SURF4|6836|surfeit 4##DQ891911|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##DQ895096|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AM392617|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AK025493|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##BC071691|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AK310164|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##BC009274|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AK314333|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AK315904|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AK304547|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AL136894|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AF273304|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AF295774|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##NM_020385|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AK295982|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)	0.98027	CTCF.p2:2:0.980
chr11	35294012	35294169	reg1022028.p1	5.596	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	-15265	-	TSC_hg19_v1_chr11_+_35198199 AK129808	-95878	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-133230	+	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	146621	-	TSC_hg19_v1_chr11_-_35441106 NM_004171	147013	-	S83375 U01824 TSC_hg19_v1_chr11_-_35441572 AK122843 NM_001195728 NM_001252652	147465	-	CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK129808|CD44|960|CD44 molecule (Indian blood group)##AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.0	
chr12	131400999	131401179	reg1001200.p2	5.596	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-44378	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-44464	+	TSC_hg19_v1_chr12_+_131356615 AF054183 AK311223 AK316193 AK312466 BC000852 NM_006325	-44503	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	37364	+	TSC_hg19_v1_chr12_+_132195623 BC142980	794524	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	794567	+	BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##AF054183|RAN|5901|RAN, member RAS oncogene family##AK316193|RAN|5901|RAN, member RAS oncogene family##AK312466|RAN|5901|RAN, member RAS oncogene family##BC000852|RAN|5901|RAN, member RAS oncogene family##NM_006325|RAN|5901|RAN, member RAS oncogene family##BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)	0.0	
chr1	46908096	46908239	reg1020143.p1	5.596	+	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	-48191	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-101724	+	TSC_hg19_v1_chr1_+_46769369 D28439 BC093060 BC001934 NM_006004 BC015177 BC107703 BC001426 AK311967 Y00764 M36647 BT007070	-138780	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	64505	+	NM_001097611	108719	-	BC002755 AB000409 AK096423 TSC_hg19_v1_chr1_-_47069922	161737	-	NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##D28439|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC093060|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001934|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006004|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC015177|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC107703|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001426|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##AK311967|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##Y00764|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##M36647|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BT007070|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001097611|KNCN|148930|kinocilin##BC002755|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AB000409|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK096423|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1	0.946252	CTCF.p2:-40:0.936
chr4	118055632	118055771	reg1028097.p1	5.596	+	AK074617 BC030831 NM_152402	-48968	-	BC113075 BC012326 AK289670 AB036429 NM_022569	-2020720	-	NM_003360 U30930	-2512179	+	TSC_hg19_v1_chr4_+_118954764 AY358852	899070	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	899874	+	TSC_hg19_v1_chr4_+_119199912 BC017993 BC039555	1144216	+	AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC017993|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##BC039555|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)	0.456632	CTCF.p2:-33:0.457
chr6	68643330	68643431	reg1022988.p2	5.596	+	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	-44352	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	-2226287	-	AY358133 NM_198283 AK310478	-2353675	-	AL833240 TSC_hg19_v1_chr6_-_69345026	701592	-	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	702021	+	TSC_hg19_v1_chr6_-_70506472 AB074281	1863097	-	AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3##AB074281|LMBRD1|55788|LMBR1 domain containing 1	0.998281	CTCF.p2:-6:0.998
chr17	74500311	74500457	reg1023715.p1	5.595	+	TSC_hg19_v1_chr17_-_74497506 BC016034 AK292135 NM_024599	-2925	-	AK303434 AY500247 AK292166 NM_001005498	-16486	-	NM_001088 U40347 AB593119 BC069434	-36727	+	AJ315162 AK098057 BC029798 AB057769 BC018822 NM_134268	33318	-	DQ390338 NM_001077620 BC146898 BC146904	35762	+	TSC_hg19_v1_chr17_+_74553850 AK123993 AK129904 AB073602 BC042949 AK055935 BX647993 BC100293	53495	+	BC016034|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292135|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_024599|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK303434|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AY500247|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292166|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001005498|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001088|AANAT|15|aralkylamine N-acetyltransferase##U40347|AANAT|15|aralkylamine N-acetyltransferase##AB593119|AANAT|15|aralkylamine N-acetyltransferase##BC069434|AANAT|15|aralkylamine N-acetyltransferase##AJ315162|CYGB|114757|cytoglobin##AK098057|CYGB|114757|cytoglobin##BC029798|CYGB|114757|cytoglobin##AB057769|CYGB|114757|cytoglobin##NM_134268|CYGB|114757|cytoglobin##DQ390338|PRCD|768206|progressive rod-cone degeneration##NM_001077620|PRCD|768206|progressive rod-cone degeneration##BC146898|PRCD|768206|progressive rod-cone degeneration##BC146904|PRCD|768206|progressive rod-cone degeneration##BC042949|LOC100507246|100507246|uncharacterized LOC100507246##BX647993|LOC100507246|100507246|uncharacterized LOC100507246##BC100293|LOC100507246|100507246|uncharacterized LOC100507246	0.0	
chr19	8650914	8651026	reg1025371.p2	5.595	+	TSC_hg19_v1_chr19_-_8642338 AB290178	-8572	-	TSC_hg19_v1_chr19_-_8642317 AK301166 AK310058 AB210037 AK131106 NM_012335	-8648	-	TSC_hg19_v1_chr19_-_8642306 BC028071	-8669	-	TSC_hg19_v1_chr19_-_8675585 AB209515 NM_030957	24622	-	AY248901 AK292258 BC024028 TSC_hg19_v1_chr19_-_8809146 BC045752 NM_178525	158142	-	BC137046 BC151149 NM_001004699	190382	+	AB290178|MYO1F|4542|myosin IF##AK301166|MYO1F|4542|myosin IF##AB210037|MYO1F|4542|myosin IF##AK131106|MYO1F|4542|myosin IF##NM_012335|MYO1F|4542|myosin IF##BC028071|MYO1F|4542|myosin IF##AB209515|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##NM_030957|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##AY248901|ACTL9|284382|actin-like 9##AK292258|ACTL9|284382|actin-like 9##BC024028|ACTL9|284382|actin-like 9##BC045752|ACTL9|284382|actin-like 9##NM_178525|ACTL9|284382|actin-like 9##BC137046|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##BC151149|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##NM_001004699|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1	0.9945	CTCF.p2:22:0.995
chr7	44284028	44284118	reg1022798.p1	5.595	+	TSC_hg19_v1_chr7_+_44240639 BC007319 AF091079 U95735 DQ890653 DQ893833 CU675611 AB451317 AB451447 BT007078 CR456989 CR542008	-43387	+	TSC_hg19_v1_chr7_+_44240631 AK223488	-43453	+	TSC_hg19_v1_chr7_+_44240576 NM_006555 AK312622	-43495	+	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	81218	-	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	246208	-	AY437865 AY515256 FJ481111 TSC_hg19_v1_chr7_-_44580901 BC117178 BC143731 BC143756 AF192522 AF192523 NM_001101648 NM_013389	296812	-	BC007319|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AF091079|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##U95735|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ890653|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ893833|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451317|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451447|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BT007078|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR456989|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR542008|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK223488|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##NM_006555|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK312622|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3##AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	0.985434	CTCF.p2:6:0.985
chr12	13408790	13408893	reg1020733.p1	5.594	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-59112	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-59124	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-59203	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	724145	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	1109794	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	1129431	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.999219	CTCF.p2:-2:0.999
chr15	100882339	100882455	reg1024198.p2	5.594	+	AB527357 AJ315735 NM_139057	-254	-	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-608763	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-608793	-	BC034500 BC034970 NM_178842	202500	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	260012	-	NM_024708 NM_198243 TSC_hg19_v1_chr15_+_101142810 AK289860 BC063581 AF451994 AK026204 AK222958 AK222974 BC025252	260398	+	AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)##NM_024708|ASB7|140460|ankyrin repeat and SOCS box containing 7##NM_198243|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK289860|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC063581|ASB7|140460|ankyrin repeat and SOCS box containing 7##AF451994|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK026204|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222958|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222974|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC025252|ASB7|140460|ankyrin repeat and SOCS box containing 7	0.244469	CTCF.p2:13:0.244
chr2	113484549	113484729	reg1000045.p3	5.594	+	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	-81119	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-142450	+	TSC_hg19_v1_chr2_+_113342023 AK024631 BC004498 NM_032309 AK312219	-142601	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	37583	-	NM_000575 BC035169	58333	-	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	109705	-	NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BC004498|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_032309|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK312219|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta	0.0	
chr3	53208534	53208638	reg1023604.p1	5.594	+	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	-13367	+	TSC_hg19_v1_chr3_-_53164452 AJ318099 BC043595 NM_052859	-44135	-	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	-128523	-	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	81425	-	TSC_hg19_v1_chr3_-_53290099 NM_001064 NM_001135055	81528	-	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	173007	-	BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##AJ318099|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043595|RFT1|91869|RFT1 homolog (S. cerevisiae)##NM_052859|RFT1|91869|RFT1 homolog (S. cerevisiae)##AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase##NM_001064|TKT|7086|transketolase##NM_001135055|TKT|7086|transketolase##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	0.0	
chr4	1812087	1812208	reg1007285.p2	5.594	+	TSC_hg19_v1_chr4_+_1795019 AB209441 NM_000142 NM_001163213 NM_022965	-17121	+	TSC_hg19_v1_chr4_+_1723248 AK302463 AK225631 BC106071 AF093543 AF479620 AJ243997 BC111771	-88879	+	TSC_hg19_v1_chr4_+_1723215 NM_006342	-88930	+	DQ893606 AK293572 TSC_hg19_v1_chr4_-_1857827 BC014500 BC021208 AF061025 NM_012318	45684	-	AK289697 TSC_hg19_v1_chr4_+_1873132 NM_001042424	60937	+	TSC_hg19_v1_chr4_+_1873169 BC052254 BC020545 BC032731	61051	+	AB209441|FGFR3|2261|fibroblast growth factor receptor 3##NM_000142|FGFR3|2261|fibroblast growth factor receptor 3##NM_001163213|FGFR3|2261|fibroblast growth factor receptor 3##NM_022965|FGFR3|2261|fibroblast growth factor receptor 3##AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3##NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3##DQ893606|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK293572|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC014500|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC021208|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AF061025|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##NM_012318|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK289697|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_001042424|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	0.998413	CTCF.p2:10:0.998
chr4	90403530	90403683	reg1031168.p1	5.594	+	TSC_hg19_v1_chr4_-_90229171 NM_198281	-174449	-	AK124616 TSC_hg19_v1_chr4_-_90228950	-174655	-	AK027653 NM_145715	-369639	+	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	354636	-	NM_001146055	355840	-	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	412456	+	NM_198281|GPRIN3|285513|GPRIN family member 3##AK124616|GPRIN3|285513|GPRIN family member 3##AK027653|TIGD2|166815|tigger transposable element derived 2##NM_145715|TIGD2|166815|tigger transposable element derived 2##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_001146055|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1	0.977924	CTCF.p2:1:0.978
chr6	125833892	125834032	reg1030258.p1	5.594	+	TSC_hg19_v1_chr6_-_125623231 BC001671 NM_016063	-210715	-	TSC_hg19_v1_chr6_-_125623123 AF529363 BC066332 BC061520 BC003357 AF151888	-210857	-	AK124817 NM_001003395	-358586	+	TSC_hg19_v1_chr6_+_126070724 NM_012259	236765	+	TSC_hg19_v1_chr6_+_126070775 AF173901	236804	+	AK289943 AF232238 AB044755 BC007707 TSC_hg19_v1_chr6_+_126070853 AF237949 AJ249545	236880	+	BC001671|HDDC2|51020|HD domain containing 2##NM_016063|HDDC2|51020|HD domain containing 2##AF529363|HDDC2|51020|HD domain containing 2##BC066332|HDDC2|51020|HD domain containing 2##BC061520|HDDC2|51020|HD domain containing 2##BC003357|HDDC2|51020|HD domain containing 2##AF151888|HDDC2|51020|HD domain containing 2##AK124817|TPD52L1|7164|tumor protein D52-like 1##NM_001003395|TPD52L1|7164|tumor protein D52-like 1##NM_012259|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF173901|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AK289943|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF232238|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AB044755|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##BC007707|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AF237949|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2##AJ249545|HEY2|23493|hairy/enhancer-of-split related with YRPW motif 2	0.243458	CTCF.p2:2:0.243
chr7	74572988	74573119	reg1024586.p1	5.594	+	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	-64679	+	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	-83361	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	-83415	-	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	294467	-	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	415517	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	451912	+	NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73	0.0	
chr11	64085569	64085681	reg1023998.p2	5.593	+	BC110983 NM_012094 NM_181651 NM_181652 TSC_hg19_v1_chr11_+_64085600 AF197952	-46	+	TSC_hg19_v1_chr11_-_64085009 AK312050 DQ892261 DQ895463 BC105294 BC029482 BC017172 AF161501 AF229068 NM_016404	-604	-	TSC_hg19_v1_chr11_+_64073040 L38487 NM_004451 BC063795 BC073956	-12557	+	TSC_hg19_v1_chr11_+_64085676 AF124993 AF110731 BC113723 BC113725 BC143849 BC171733 AF112212 AF242525 AF231705 CR457203 HQ258129 AJ249483	97	+	TSC_hg19_v1_chr11_+_64107692 BC151218 BC151222 NM_032251 AK090436 BC140822 BC140824 BC141866	22077	+	TSC_hg19_v1_chr11_+_64120348 AK126728	34734	+	BC110983|PRDX5|25824|peroxiredoxin 5##NM_012094|PRDX5|25824|peroxiredoxin 5##NM_181651|PRDX5|25824|peroxiredoxin 5##NM_181652|PRDX5|25824|peroxiredoxin 5##AF197952|PRDX5|25824|peroxiredoxin 5##AK312050|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ892261|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ895463|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC105294|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC029482|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC017172|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF161501|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF229068|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##NM_016404|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##L38487|ESRRA|2101|estrogen-related receptor alpha##NM_004451|ESRRA|2101|estrogen-related receptor alpha##BC063795|ESRRA|2101|estrogen-related receptor alpha##BC073956|ESRRA|2101|estrogen-related receptor alpha##AF124993|PRDX5|25824|peroxiredoxin 5##AF110731|PRDX5|25824|peroxiredoxin 5##BC113723|PRDX5|25824|peroxiredoxin 5##BC113725|PRDX5|25824|peroxiredoxin 5##BC143849|PRDX5|25824|peroxiredoxin 5##BC171733|PRDX5|25824|peroxiredoxin 5##AF112212|PRDX5|25824|peroxiredoxin 5##AF242525|PRDX5|25824|peroxiredoxin 5##AF231705|PRDX5|25824|peroxiredoxin 5##CR457203|PRDX5|25824|peroxiredoxin 5##HQ258129|PRDX5|25824|peroxiredoxin 5##AJ249483|PRDX5|25824|peroxiredoxin 5##BC151218|CCDC88B|283234|coiled-coil domain containing 88B##BC151222|CCDC88B|283234|coiled-coil domain containing 88B##NM_032251|CCDC88B|283234|coiled-coil domain containing 88B##AK090436|CCDC88B|283234|coiled-coil domain containing 88B##BC140822|CCDC88B|283234|coiled-coil domain containing 88B##BC140824|CCDC88B|283234|coiled-coil domain containing 88B##BC141866|CCDC88B|283234|coiled-coil domain containing 88B##AK126728|CCDC88B|283234|coiled-coil domain containing 88B	0.0	
chr1	223884256	223884366	reg1023979.p1	5.593	+	TSC_hg19_v1_chr1_-_223853404 NM_001143962	-30894	-	TSC_hg19_v1_chr1_-_223853364 BC157893	-30941	-	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	-317546	+	AK316211 AK297800 NM_001146068	4962	+	TSC_hg19_v1_chr1_+_223900093 BC007686 BC011828 NM_001748	15806	+	M23254 TSC_hg19_v1_chr1_+_223900223 AK303952 AF261089 AK315179 BC021303	15907	+	NM_001143962|CAPN8|388743|calpain 8##BC157893|CAPN8|388743|calpain 8##NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65##AK316211|CAPN2|824|calpain 2, (m/II) large subunit##AK297800|CAPN2|824|calpain 2, (m/II) large subunit##NM_001146068|CAPN2|824|calpain 2, (m/II) large subunit##BC007686|CAPN2|824|calpain 2, (m/II) large subunit##BC011828|CAPN2|824|calpain 2, (m/II) large subunit##NM_001748|CAPN2|824|calpain 2, (m/II) large subunit##M23254|CAPN2|824|calpain 2, (m/II) large subunit##AK303952|CAPN2|824|calpain 2, (m/II) large subunit##AF261089|CAPN2|824|calpain 2, (m/II) large subunit##AK315179|CAPN2|824|calpain 2, (m/II) large subunit##BC021303|CAPN2|824|calpain 2, (m/II) large subunit	0.999869	CTCF.p2:2:1.000
chr15	96601699	96601880	reg1023971.p1	5.593	+	TSC_hg19_v1_chr15_-_95870310 BC040875	-731470	-	NM_001159644 BC025708 BC111024 AK002037	-1702480	+	NM_001159643 NM_018349 AY656717 BC131527	-1760328	+	BC106083 NM_001145155 FM208183	267372	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	272188	+	AK316086 NM_001145156	274004	+	BC040875|LOC400456|400456|uncharacterized LOC400456##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.0	
chr5	77923181	77923322	reg1029505.p1	5.593	+	CR936660 TSC_hg19_v1_chr5_-_77845052	-78228	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-117055	-	D86961 BC136335 BC136336 AY309920 TSC_hg19_v1_chr5_-_77806179	-117197	-	TSC_hg19_v1_chr5_-_77944584 NM_005779	21315	-	J05225 TSC_hg19_v1_chr5_-_78281101	357837	-	AK290865 TSC_hg19_v1_chr5_-_78281134	357882	-	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B	0.94318	CTCF.p2:11:0.943
chr12	38728296	38728420	reg1024819.p1	5.592	+	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-17733	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-4552885	+	TSC_hg19_v1_chr12_+_34175402 BC022336	-4552972	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	571025	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	1108641	-	AK314254 NM_005164	1285484	-	NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC022336|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2	0.483819	CTCF.p2:-18:0.484
chr19	42944629	42944724	reg1023974.p2	5.592	+	AK309893 AK292482 BC029961 BC070041 NM_005357 U40002	-13138	-	TSC_hg19_v1_chr19_-_42928157 BC029301	-16463	-	TSC_hg19_v1_chr19_+_42901325 AK311181	-43364	+	BC093946 BC112095 AK292985 AY358433 NM_198477 AY598464	2448	-	X16356 TSC_hg19_v1_chr19_-_43031473	86733	-	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	87916	-	AK292482|LIPE|3991|lipase, hormone-sensitive##BC029961|LIPE|3991|lipase, hormone-sensitive##BC070041|LIPE|3991|lipase, hormone-sensitive##NM_005357|LIPE|3991|lipase, hormone-sensitive##U40002|LIPE|3991|lipase, hormone-sensitive##BC029301|LIPE|3991|lipase, hormone-sensitive##BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17##BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17##NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)	0.999622	CTCF.p2:-8:1.000
chr22	21316308	21316408	reg1022358.p2	5.592	+	TSC_hg19_v1_chr22_+_21271940 CR456423	-44355	+	TSC_hg19_v1_chr22_+_21271756 BC043500	-44527	+	BC026248 TSC_hg19_v1_chr22_+_21271721	-44637	+	NM_001018060 NM_144704 AK055035 TSC_hg19_v1_chr22_+_21319447 BC032485	3077	+	NM_001146288 AK094844 TSC_hg19_v1_chr22_+_21321550 AK295581 AK316042	5141	+	AY927574 TSC_hg19_v1_chr22_+_21330441	14046	+	CR456423|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like##BC043500|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like##BC026248|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like##NM_001018060|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##NM_144704|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##AK055035|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##BC032485|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##NM_001146288|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##AK094844|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##AK295581|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##AK316042|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##AY927574|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3	0.0	
chr3	119243924	119244040	reg1025287.p2	5.592	+	NM_016589 TSC_hg19_v1_chr3_+_119217393 AF139077 AL136622 AK026250 AK225954 AF210057 AL390077 AY358633 AL390090 BC012341 AB528090 AM393632 CU680290 CR457158 CR533524	-26509	+	TSC_hg19_v1_chr3_+_119187809 NM_152305 AY298903 BC030614 AK295984 AK301002 AK315367 AK222937 AF168711 BC048810 AY358581 AK075444 BC011871 CU688946 CU690580	-56157	+	TSC_hg19_v1_chr3_-_119182462 BC003192 BC010070 BC021277 AK222950 AK223248 AK001764 NM_018266	-61513	-	M27533 BC042665 AK292129 NM_005191	34459	-	TSC_hg19_v1_chr3_+_119298355 AK304560 AK291787	54413	+	BC063883 NM_001125 TSC_hg19_v1_chr3_+_119298606	54583	+	NM_016589|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF139077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL136622|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK026250|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK225954|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF210057|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AY358633|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390090|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##BC012341|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AM393632|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR457158|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR533524|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##NM_152305|POGLUT1|56983|protein O-glucosyltransferase 1##AY298903|POGLUT1|56983|protein O-glucosyltransferase 1##BC030614|POGLUT1|56983|protein O-glucosyltransferase 1##AK295984|POGLUT1|56983|protein O-glucosyltransferase 1##AK301002|POGLUT1|56983|protein O-glucosyltransferase 1##AK315367|POGLUT1|56983|protein O-glucosyltransferase 1##AK222937|POGLUT1|56983|protein O-glucosyltransferase 1##AF168711|POGLUT1|56983|protein O-glucosyltransferase 1##BC048810|POGLUT1|56983|protein O-glucosyltransferase 1##AY358581|POGLUT1|56983|protein O-glucosyltransferase 1##AK075444|POGLUT1|56983|protein O-glucosyltransferase 1##BC003192|TMEM39A|55254|transmembrane protein 39A##BC010070|TMEM39A|55254|transmembrane protein 39A##BC021277|TMEM39A|55254|transmembrane protein 39A##AK222950|TMEM39A|55254|transmembrane protein 39A##AK223248|TMEM39A|55254|transmembrane protein 39A##AK001764|TMEM39A|55254|transmembrane protein 39A##NM_018266|TMEM39A|55254|transmembrane protein 39A##M27533|CD80|941|CD80 molecule##BC042665|CD80|941|CD80 molecule##AK292129|CD80|941|CD80 molecule##NM_005191|CD80|941|CD80 molecule##AK304560|ADPRH|141|ADP-ribosylarginine hydrolase##AK291787|ADPRH|141|ADP-ribosylarginine hydrolase##BC063883|ADPRH|141|ADP-ribosylarginine hydrolase##NM_001125|ADPRH|141|ADP-ribosylarginine hydrolase	0.0	
chr6	157948513	157948649	reg1021183.p1	5.592	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-146042	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-203364	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-203997	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	295708	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	295793	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	454306	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.0	
chr8	100299035	100299172	reg1024025.p1	5.592	+	TSC_hg19_v1_chr8_+_100025537 BC094749	-273513	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	-273591	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	-273608	+	TSC_hg19_v1_chr8_-_100905892 X13238	606776	-	TSC_hg19_v1_chr8_-_100905910 AK311791	606818	-	NM_004374	607138	-	BC094749|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##X13238|COX6C|1345|cytochrome c oxidase subunit VIc##AK311791|COX6C|1345|cytochrome c oxidase subunit VIc##NM_004374|COX6C|1345|cytochrome c oxidase subunit VIc	0.995017	CTCF.p2:-6:0.995
chr9	33925273	33925382	reg1022603.p1	5.592	+	TSC_hg19_v1_chr9_+_33817704 AJ240087 CR457233	-107655	+	TSC_hg19_v1_chr9_+_33817325 BC047584 AK000426 BC004862 AK225880	-107933	+	TSC_hg19_v1_chr9_+_33817170 NM_017811	-108143	+	AB209911 TSC_hg19_v1_chr9_-_34048886 AK302754 AK294952 AK299183 AK303493 CR933678	123550	-	TSC_hg19_v1_chr9_-_34048895 BC111409 AK302335 NM_018449	123589	-	AK000354 AK292935 TSC_hg19_v1_chr9_-_34126623	201259	-	AJ240087|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##CR457233|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC047584|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK000426|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC004862|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK225880|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AB209911|UBAP2|55833|ubiquitin associated protein 2##AK302754|UBAP2|55833|ubiquitin associated protein 2##AK294952|UBAP2|55833|ubiquitin associated protein 2##AK299183|UBAP2|55833|ubiquitin associated protein 2##AK303493|UBAP2|55833|ubiquitin associated protein 2##CR933678|UBAP2|55833|ubiquitin associated protein 2##BC111409|UBAP2|55833|ubiquitin associated protein 2##AK302335|UBAP2|55833|ubiquitin associated protein 2##NM_018449|UBAP2|55833|ubiquitin associated protein 2##AK000354|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK292935|DCAF12|25853|DDB1 and CUL4 associated factor 12	0.407544	CTCF.p2:12:0.408
chr20	44079151	44079288	reg1025327.p1	5.591	+	NM_001184728 NM_001184729 NM_001184730 NM_015937 AK302093 TSC_hg19_v1_chr20_+_44044780 BC136827 BC136828 AK225517 BC015022 AK296063 AK299013 AK301815 AK311492 AK311520 AK316358 AK075469 AK293294 BX537612 AK293686 AK296139 AK311100 AK311416 AK311522 AB057724 BC110892 AY358588 AF132940 AL121742	-34465	+	TSC_hg19_v1_chr20_+_44036940 AY113697 AB463592 AM393126 AM393396 AM393681 CU674552	-42196	+	NM_001048225 NM_001048226	-42591	+	AK290288 AK311966 TSC_hg19_v1_chr20_+_44098394 NM_006103 AK225528 X63187 AY212888 AF330259 AF330260 AF330262 BC039816 BC046106 EU831749 EU831825 CR456977	19187	+	AY372172 NM_006652	65044	-	BC101600 BC101604 AF411861 NM_080827	88911	-	NM_001184728|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##NM_001184729|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##NM_001184730|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##NM_015937|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK302093|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BC136827|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BC136828|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK225517|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BC015022|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK296063|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK299013|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK301815|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311492|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311520|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK316358|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK075469|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK293294|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BX537612|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK293686|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK296139|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311100|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311416|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AK311522|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AB057724|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##BC110892|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AY358588|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AF132940|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AL121742|PIGT|51604|phosphatidylinositol glycan anchor biosynthesis, class T##AY113697|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AM393126|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AM393396|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AM393681|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048225|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048226|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AK290288|WFDC2|10406|WAP four-disulfide core domain 2##AK311966|WFDC2|10406|WAP four-disulfide core domain 2##NM_006103|WFDC2|10406|WAP four-disulfide core domain 2##AK225528|WFDC2|10406|WAP four-disulfide core domain 2##X63187|WFDC2|10406|WAP four-disulfide core domain 2##AY212888|WFDC2|10406|WAP four-disulfide core domain 2##AF330259|WFDC2|10406|WAP four-disulfide core domain 2##AF330260|WFDC2|10406|WAP four-disulfide core domain 2##AF330262|WFDC2|10406|WAP four-disulfide core domain 2##BC039816|WFDC2|10406|WAP four-disulfide core domain 2##BC046106|WFDC2|10406|WAP four-disulfide core domain 2##EU831749|WFDC2|10406|WAP four-disulfide core domain 2##EU831825|WFDC2|10406|WAP four-disulfide core domain 2##CR456977|WFDC2|10406|WAP four-disulfide core domain 2##AY372172|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3##NM_006652|SPINT3|10816|serine peptidase inhibitor, Kunitz type, 3##BC101600|WFDC6|140870|WAP four-disulfide core domain 6##BC101604|WFDC6|140870|WAP four-disulfide core domain 6##AF411861|WFDC6|140870|WAP four-disulfide core domain 6##NM_080827|WFDC6|140870|WAP four-disulfide core domain 6	0.999557	CTCF.p2:-14:1.000
chr7	127987742	127987848	reg1025432.p1	5.591	+	TSC_hg19_v1_chr7_-_127983944 BC013889 AK222716 AK300500 AK295976 AK001239 NM_001166135 NM_018077	-3859	-	CU680694 TSC_hg19_v1_chr7_-_127983862	-3941	-	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	-106462	+	BC063892 NM_001114726 NM_001174164	13902	-	AK054640 AK293413 AK297943 TSC_hg19_v1_chr7_-_128046013 NM_001142573 NM_001142574 NM_001142575	58222	-	AK131294 TSC_hg19_v1_chr7_-_128049984 CR933672	62185	-	BC013889|RBM28|55131|RNA binding motif protein 28##AK222716|RBM28|55131|RNA binding motif protein 28##AK300500|RBM28|55131|RNA binding motif protein 28##AK001239|RBM28|55131|RNA binding motif protein 28##NM_001166135|RBM28|55131|RNA binding motif protein 28##NM_018077|RBM28|55131|RNA binding motif protein 28##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin##BC063892|PRRT4|401399|proline-rich transmembrane protein 4##NM_001114726|PRRT4|401399|proline-rich transmembrane protein 4##NM_001174164|PRRT4|401399|proline-rich transmembrane protein 4##AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK131294|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##CR933672|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1	0.960761	CTCF.p2:1:0.961
chr12	54151061	54151181	reg1026839.p1	5.590	+	AB040969 TSC_hg19_v1_chr12_-_54121231 AF370415 AY563137 BC003177 AY358397 AL136895 AK122773 AK222646 AK092788 AX747731 AK294424 AK296497 AK309199 AK027881 AK315578 NM_001143682 NM_020898	-29867	-	NM_001002031	-80610	-	NM_005176	-81013	-	AF255676 NM_017410 BC090850 AF263466 BC002754 BT009908	181511	+	TSC_hg19_v1_chr12_+_54348683 AB464579 NM_173860	197577	+	NM_014212 AK291946 BC001543 AJ000041 CU674756	215846	+	AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1##BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001002031|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##NM_005176|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##AF255676|HOXC13|3229|homeobox C13##NM_017410|HOXC13|3229|homeobox C13##BC090850|HOXC13|3229|homeobox C13##AF263466|HOXC13|3229|homeobox C13##BC002754|HOXC13|3229|homeobox C13##BT009908|HOXC13|3229|homeobox C13##NM_173860|HOXC12|3228|homeobox C12##NM_014212|HOXC11|3227|homeobox C11##AK291946|HOXC11|3227|homeobox C11##BC001543|HOXC11|3227|homeobox C11##AJ000041|HOXC11|3227|homeobox C11	0.010647	
chr3	22963957	22964068	reg1025067.p2	5.590	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-549878	-	AK026072 NM_024697	-1171197	-	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-2736338	-	TSC_hg19_v1_chr3_+_23244600 AK307075	280571	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	280743	+	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	883398	+	AK310298|ZNF385D|79750|zinc finger protein 385D##AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.531598	CTCF.p2:-6:0.532
chr1	155163366	155163502	reg1023995.p2	5.588	+	AF125525 AY466157 X80761 S81781 AF348143 AY327582 AY327583 AY327584 AY327585 AY327586 AY327589 AY327590 AY327591 AY327592 AY327595 AY327597 AY327598 AY327599 AY327600 S81736 U60259 U60260 U60261 X52228 X52229 BC120974 BC120975 AY327587 AY327588 AY327596 EF583642 EF583643 EF583644 EF583645 EF583646 EF583647 EF583648 EF583649 EF583650 EF583651 EF583652 EF583653 EF583654 EF583655 EF583656 EF670706 EF670707 EF670708 EF670709 EF670710 EF670711 EF670712 EF670713 EF670714 EF670715 EF670716 EF670717 EF670718 EF670719 EF670720 EF670721 EF670722 EF670723 FJ226028 FJ226029 FJ226030 FJ226031 FJ226032 FJ226033 FJ226034 FJ226035 FJ226036 FJ226037 FJ226038 FJ226039 FJ226040 FJ226041 FJ226042 FJ226043 FJ226044 FJ226045 FJ226046 FJ226047 FJ226049 FJ226050 FJ226051 FJ226052 FJ226053 FJ226054 FJ226055 M32738 M32739 AK301575 M31823 TSC_hg19_v1_chr1_-_155162701 J05581 NM_001018016 NM_001018017 NM_001044390 NM_001044391 NM_001044392 NM_001044393 NM_001204285 NM_001204286 NM_001204287 NM_001204288 NM_001204289 NM_001204290 NM_001204291 NM_001204292 NM_001204293 NM_001204294 NM_001204295 NM_001204296 NM_001204297 NM_002456 J05582 Z17324 Z17325	-765	-	TSC_hg19_v1_chr1_+_155147069 AK308075 AK308637	-16372	+	TSC_hg19_v1_chr1_+_155146373 BC126372 BC143828 AK026882 AK225075 AK297318 NM_025058 BC069416 BC069568 AK096158 AY251386	-17051	+	AK223278 L38969 TSC_hg19_v1_chr1_-_155177687 AK298803 BC113846 BC113847 AK298592 AK314337 NM_001252607 NM_001252608 NM_007112	14294	-	NM_002455 NM_198883 AK313863 BC001906	15104	+	AK311031 TSC_hg19_v1_chr1_-_155178970	15543	-	AF125525|MUC1|4582|mucin 1, cell surface associated##AY466157|MUC1|4582|mucin 1, cell surface associated##X80761|MUC1|4582|mucin 1, cell surface associated##S81781|MUC1|4582|mucin 1, cell surface associated##AF348143|MUC1|4582|mucin 1, cell surface associated##AY327582|MUC1|4582|mucin 1, cell surface associated##AY327583|MUC1|4582|mucin 1, cell surface associated##AY327584|MUC1|4582|mucin 1, cell surface associated##AY327585|MUC1|4582|mucin 1, cell surface associated##AY327586|MUC1|4582|mucin 1, cell surface associated##AY327589|MUC1|4582|mucin 1, cell surface associated##AY327590|MUC1|4582|mucin 1, cell surface associated##AY327591|MUC1|4582|mucin 1, cell surface associated##AY327592|MUC1|4582|mucin 1, cell surface associated##AY327595|MUC1|4582|mucin 1, cell surface associated##AY327597|MUC1|4582|mucin 1, cell surface associated##AY327598|MUC1|4582|mucin 1, cell surface associated##AY327599|MUC1|4582|mucin 1, cell surface associated##AY327600|MUC1|4582|mucin 1, cell surface associated##S81736|MUC1|4582|mucin 1, cell surface associated##U60259|MUC1|4582|mucin 1, cell surface associated##U60260|MUC1|4582|mucin 1, cell surface associated##U60261|MUC1|4582|mucin 1, cell surface associated##X52228|MUC1|4582|mucin 1, cell surface associated##X52229|MUC1|4582|mucin 1, cell surface associated##BC120974|MUC1|4582|mucin 1, cell surface associated##BC120975|MUC1|4582|mucin 1, cell surface associated##AY327587|MUC1|4582|mucin 1, cell surface associated##AY327588|MUC1|4582|mucin 1, cell surface associated##AY327596|MUC1|4582|mucin 1, cell surface associated##EF583642|MUC1|4582|mucin 1, cell surface associated##EF583643|MUC1|4582|mucin 1, cell surface associated##EF583644|MUC1|4582|mucin 1, cell surface associated##EF583645|MUC1|4582|mucin 1, cell surface associated##EF583646|MUC1|4582|mucin 1, cell surface associated##EF583647|MUC1|4582|mucin 1, cell surface associated##EF583648|MUC1|4582|mucin 1, cell surface associated##EF583649|MUC1|4582|mucin 1, cell surface associated##EF583650|MUC1|4582|mucin 1, cell surface associated##EF583651|MUC1|4582|mucin 1, cell surface associated##EF583652|MUC1|4582|mucin 1, cell surface associated##EF583653|MUC1|4582|mucin 1, cell surface associated##EF583654|MUC1|4582|mucin 1, cell surface associated##EF583655|MUC1|4582|mucin 1, cell surface associated##EF583656|MUC1|4582|mucin 1, cell surface associated##EF670706|MUC1|4582|mucin 1, cell surface associated##EF670707|MUC1|4582|mucin 1, cell surface associated##EF670708|MUC1|4582|mucin 1, cell surface associated##EF670709|MUC1|4582|mucin 1, cell surface associated##EF670710|MUC1|4582|mucin 1, cell surface associated##EF670711|MUC1|4582|mucin 1, cell surface associated##EF670712|MUC1|4582|mucin 1, cell surface associated##EF670713|MUC1|4582|mucin 1, cell surface associated##EF670714|MUC1|4582|mucin 1, cell surface associated##EF670715|MUC1|4582|mucin 1, cell surface associated##EF670716|MUC1|4582|mucin 1, cell surface associated##EF670717|MUC1|4582|mucin 1, cell surface associated##EF670718|MUC1|4582|mucin 1, cell surface associated##EF670719|MUC1|4582|mucin 1, cell surface associated##EF670720|MUC1|4582|mucin 1, cell surface associated##EF670721|MUC1|4582|mucin 1, cell surface associated##EF670722|MUC1|4582|mucin 1, cell surface associated##EF670723|MUC1|4582|mucin 1, cell surface associated##FJ226028|MUC1|4582|mucin 1, cell surface associated##FJ226029|MUC1|4582|mucin 1, cell surface associated##FJ226030|MUC1|4582|mucin 1, cell surface associated##FJ226031|MUC1|4582|mucin 1, cell surface associated##FJ226032|MUC1|4582|mucin 1, cell surface associated##FJ226033|MUC1|4582|mucin 1, cell surface associated##FJ226034|MUC1|4582|mucin 1, cell surface associated##FJ226035|MUC1|4582|mucin 1, cell surface associated##FJ226036|MUC1|4582|mucin 1, cell surface associated##FJ226037|MUC1|4582|mucin 1, cell surface associated##FJ226038|MUC1|4582|mucin 1, cell surface associated##FJ226039|MUC1|4582|mucin 1, cell surface associated##FJ226040|MUC1|4582|mucin 1, cell surface associated##FJ226041|MUC1|4582|mucin 1, cell surface associated##FJ226042|MUC1|4582|mucin 1, cell surface associated##FJ226043|MUC1|4582|mucin 1, cell surface associated##FJ226044|MUC1|4582|mucin 1, cell surface associated##FJ226045|MUC1|4582|mucin 1, cell surface associated##FJ226046|MUC1|4582|mucin 1, cell surface associated##FJ226047|MUC1|4582|mucin 1, cell surface associated##FJ226049|MUC1|4582|mucin 1, cell surface associated##FJ226050|MUC1|4582|mucin 1, cell surface associated##FJ226051|MUC1|4582|mucin 1, cell surface associated##FJ226052|MUC1|4582|mucin 1, cell surface associated##FJ226053|MUC1|4582|mucin 1, cell surface associated##FJ226054|MUC1|4582|mucin 1, cell surface associated##FJ226055|MUC1|4582|mucin 1, cell surface associated##M32738|MUC1|4582|mucin 1, cell surface associated##M32739|MUC1|4582|mucin 1, cell surface associated##AK301575|MUC1|4582|mucin 1, cell surface associated##M31823|MUC1|4582|mucin 1, cell surface associated##J05581|MUC1|4582|mucin 1, cell surface associated##NM_001018016|MUC1|4582|mucin 1, cell surface associated##NM_001018017|MUC1|4582|mucin 1, cell surface associated##NM_001044390|MUC1|4582|mucin 1, cell surface associated##NM_001044391|MUC1|4582|mucin 1, cell surface associated##NM_001044392|MUC1|4582|mucin 1, cell surface associated##NM_001044393|MUC1|4582|mucin 1, cell surface associated##NM_001204285|MUC1|4582|mucin 1, cell surface associated##NM_001204286|MUC1|4582|mucin 1, cell surface associated##NM_001204287|MUC1|4582|mucin 1, cell surface associated##NM_001204288|MUC1|4582|mucin 1, cell surface associated##NM_001204289|MUC1|4582|mucin 1, cell surface associated##NM_001204290|MUC1|4582|mucin 1, cell surface associated##NM_001204291|MUC1|4582|mucin 1, cell surface associated##NM_001204292|MUC1|4582|mucin 1, cell surface associated##NM_001204293|MUC1|4582|mucin 1, cell surface associated##NM_001204294|MUC1|4582|mucin 1, cell surface associated##NM_001204295|MUC1|4582|mucin 1, cell surface associated##NM_001204296|MUC1|4582|mucin 1, cell surface associated##NM_001204297|MUC1|4582|mucin 1, cell surface associated##NM_002456|MUC1|4582|mucin 1, cell surface associated##J05582|MUC1|4582|mucin 1, cell surface associated##Z17324|MUC1|4582|mucin 1, cell surface associated##Z17325|MUC1|4582|mucin 1, cell surface associated##AK308075|TRIM46|80128|tripartite motif containing 46##BC126372|TRIM46|80128|tripartite motif containing 46##BC143828|TRIM46|80128|tripartite motif containing 46##AK026882|TRIM46|80128|tripartite motif containing 46##AK225075|TRIM46|80128|tripartite motif containing 46##AK297318|TRIM46|80128|tripartite motif containing 46##NM_025058|TRIM46|80128|tripartite motif containing 46##BC069416|TRIM46|80128|tripartite motif containing 46##BC069568|TRIM46|80128|tripartite motif containing 46##AK096158|TRIM46|80128|tripartite motif containing 46##AY251386|TRIM46|80128|tripartite motif containing 46##AK223278|THBS3|7059|thrombospondin 3##L38969|THBS3|7059|thrombospondin 3##AK298803|THBS3|7059|thrombospondin 3##BC113846|THBS3|7059|thrombospondin 3##BC113847|THBS3|7059|thrombospondin 3##AK298592|THBS3|7059|thrombospondin 3##AK314337|THBS3|7059|thrombospondin 3##NM_001252607|THBS3|7059|thrombospondin 3##NM_001252608|THBS3|7059|thrombospondin 3##NM_007112|THBS3|7059|thrombospondin 3##NM_002455|MTX1|4580|metaxin 1##NM_198883|MTX1|4580|metaxin 1##AK313863|MTX1|4580|metaxin 1##BC001906|MTX1|4580|metaxin 1##AK311031|THBS3|7059|thrombospondin 3	0.998996	CTCF.p2:8:0.999
chr6	67776460	67776563	reg1026930.p1	5.588	+	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	-1359418	-	AY358133 NM_198283 AK310478	-1486806	-	AF091622 BC113650 BC113652 NM_015153 D87685 AB385299	-3420069	+	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	822517	-	AL833240 TSC_hg19_v1_chr6_-_69345026	1568461	-	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	1568890	+	FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##AF091622|PHF3|23469|PHD finger protein 3##BC113650|PHF3|23469|PHD finger protein 3##BC113652|PHF3|23469|PHD finger protein 3##NM_015153|PHF3|23469|PHD finger protein 3##D87685|PHF3|23469|PHD finger protein 3##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3	0.3394	CTCF.p2:9:0.339
chr7	42882907	42883050	reg1025036.p2	5.588	+	TSC_hg19_v1_chr7_-_42276797 AK308429	-606183	-	NM_000168	-606361	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-1140293	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	68611	-	BC002900 AB528708 CR450317 CU690460 D00760 BC047697 TSC_hg19_v1_chr7_-_42971774 AK311369 BX641097 AK222976	88775	-	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	88823	-	AK308429|GLI3|2737|GLI family zinc finger 3##NM_000168|GLI3|2737|GLI family zinc finger 3##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25##BC002900|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##CR450317|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##D00760|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC047697|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BX641097|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK222976|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2	0.0	
chr10	98507890	98508071	reg1026393.p2	5.587	+	BX648550 TSC_hg19_v1_chr10_-_98480272 AK125635 NM_152309	-27739	-	TSC_hg19_v1_chr10_-_98346798 AF269150 BC136788 BC136789 BC144412 NM_020123	-161157	-	TSC_hg19_v1_chr10_-_98346770 AK314348	-161202	-	TSC_hg19_v1_chr10_+_98592020 NM_001170765 NM_001170766 AL832106 AK308356 BC053359	84073	+	TSC_hg19_v1_chr10_-_98592186 AB593180	84220	-	TSC_hg19_v1_chr10_+_98592758 NM_032440 AL834245 AB058698	84748	+	BX648550|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AK125635|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_152309|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3##BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3##AK314348|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor##AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor##BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor##AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor##AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor	0.0	
chr11	117881698	117881879	reg1025122.p1	5.587	+	TSC_hg19_v1_chr11_+_117857155 U00672 BC028082 AB590303 CU688390 DQ891031 DQ893720 AK316146 AB209626	-24501	+	TSC_hg19_v1_chr11_+_117857108 AK291645 AK301484 NM_001558 AK301260 AK316342 AK313049 AK301492	-24698	+	BC018715 AK300283 AB048796 AB048797 BC114928 AY190317 AK027798 TSC_hg19_v1_chr11_-_117800150 NM_001077263 NM_001206789 NM_001206790 NM_001244995	-81671	-	NM_001083947 NM_001173551 NM_001173552 NM_019894 AK304113 AK311290 TSC_hg19_v1_chr11_+_117947754	65955	+	BC004855 TSC_hg19_v1_chr11_+_117947792 AK308434 AK296855 AK303173 AK290361 AK304215 AF179224 AY358530 AF216312 BC011703 AK172766	66039	+	TSC_hg19_v1_chr11_-_118016149 BC035017 NM_001142349	134370	-	U00672|IL10RA|3587|interleukin 10 receptor, alpha##BC028082|IL10RA|3587|interleukin 10 receptor, alpha##DQ891031|IL10RA|3587|interleukin 10 receptor, alpha##DQ893720|IL10RA|3587|interleukin 10 receptor, alpha##AK316146|IL10RA|3587|interleukin 10 receptor, alpha##AB209626|IL10RA|3587|interleukin 10 receptor, alpha##AK291645|IL10RA|3587|interleukin 10 receptor, alpha##AK301484|IL10RA|3587|interleukin 10 receptor, alpha##NM_001558|IL10RA|3587|interleukin 10 receptor, alpha##AK301260|IL10RA|3587|interleukin 10 receptor, alpha##AK316342|IL10RA|3587|interleukin 10 receptor, alpha##AK313049|IL10RA|3587|interleukin 10 receptor, alpha##AK301492|IL10RA|3587|interleukin 10 receptor, alpha##BC018715|TMPRSS13|84000|transmembrane protease, serine 13##AK300283|TMPRSS13|84000|transmembrane protease, serine 13##AB048796|TMPRSS13|84000|transmembrane protease, serine 13##AB048797|TMPRSS13|84000|transmembrane protease, serine 13##BC114928|TMPRSS13|84000|transmembrane protease, serine 13##AY190317|TMPRSS13|84000|transmembrane protease, serine 13##AK027798|TMPRSS13|84000|transmembrane protease, serine 13##NM_001077263|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206789|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206790|TMPRSS13|84000|transmembrane protease, serine 13##NM_001244995|TMPRSS13|84000|transmembrane protease, serine 13##NM_001083947|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173551|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173552|TMPRSS4|56649|transmembrane protease, serine 4##NM_019894|TMPRSS4|56649|transmembrane protease, serine 4##AK304113|TMPRSS4|56649|transmembrane protease, serine 4##BC004855|TMPRSS4|56649|transmembrane protease, serine 4##AK308434|TMPRSS4|56649|transmembrane protease, serine 4##AK296855|TMPRSS4|56649|transmembrane protease, serine 4##AK303173|TMPRSS4|56649|transmembrane protease, serine 4##AK290361|TMPRSS4|56649|transmembrane protease, serine 4##AK304215|TMPRSS4|56649|transmembrane protease, serine 4##AF179224|TMPRSS4|56649|transmembrane protease, serine 4##AY358530|TMPRSS4|56649|transmembrane protease, serine 4##AF216312|TMPRSS4|56649|transmembrane protease, serine 4##BC011703|TMPRSS4|56649|transmembrane protease, serine 4##AK172766|TMPRSS4|56649|transmembrane protease, serine 4##BC035017|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_001142349|SCN4B|6330|sodium channel, voltage-gated, type IV, beta	0.0	
chr11	60941115	60941207	reg1025998.p2	5.587	+	BC141827 BC142702 AK097326 TSC_hg19_v1_chr11_-_60928910 NM_017966 AL834261 AK302384	-12231	-	NM_014207 AY541703 TSC_hg19_v1_chr11_+_60869960 AK292698 X04391 BC027901 DQ892077 DQ895270	-71182	+	NM_006725 TSC_hg19_v1_chr11_+_60739236 AK128419 AK312749 BC078669 BC033755 X60992 AK292704 DQ786329 DQ786330 U66142 U66145 U66146	-201936	+	NM_001079807 AK301286 AK301293 AK301305 AK312941 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	29847	+	AK301305 AK312941 NM_001079808 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	48684	+	NM_014224 BC146999 BC171889 BC171897 BC029055	67494	+	BC141827|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##BC142702|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK097326|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_017966|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AL834261|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK302384|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_014207|CD5|921|CD5 molecule##AY541703|CD5|921|CD5 molecule##AK292698|CD5|921|CD5 molecule##X04391|CD5|921|CD5 molecule##BC027901|CD5|921|CD5 molecule##DQ892077|CD5|921|CD5 molecule##DQ895270|CD5|921|CD5 molecule##NM_006725|CD6|923|CD6 molecule##AK128419|CD6|923|CD6 molecule##AK312749|CD6|923|CD6 molecule##BC078669|CD6|923|CD6 molecule##BC033755|CD6|923|CD6 molecule##X60992|CD6|923|CD6 molecule##AK292704|CD6|923|CD6 molecule##DQ786329|CD6|923|CD6 molecule##DQ786330|CD6|923|CD6 molecule##U66142|CD6|923|CD6 molecule##U66145|CD6|923|CD6 molecule##U66146|CD6|923|CD6 molecule##NM_001079807|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301286|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301293|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##NM_001079808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##NM_014224|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##BC146999|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##BC171889|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##BC171897|PGA5|5222|pepsinogen 5, group I (pepsinogen A)##BC029055|PGA5|5222|pepsinogen 5, group I (pepsinogen A)	0.178021	
chr20	18447830	18448011	reg1021486.p1	5.587	+	TSC_hg19_v1_chr20_-_18447678 CR749327 BC036231 BC130341 BC144153 AK295073 AK055544 AK299746 NM_001099407	-195	-	BC001887 NM_001083330 NM_003434 TSC_hg19_v1_chr20_+_18269170 AK295273 AK295513 AK291389 AK316386 AK294263 AK313525	-178753	+	NM_020536 BC007537	-325005	+	TSC_hg19_v1_chr20_+_18448037 BC012588 BC016761 NM_006466 AK314838 AK096684 AK223298 AK290892 U93869 AB464048 DQ892695 DQ896169	169	+	AB464147 EU446767 AL832411 AF237576 BC020627 BC015938 NM_006606	29928	-	TSC_hg19_v1_chr20_+_18488207 NM_006363 NM_032985 NM_032986 NM_001172746	40301	+	CR749327|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC036231|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC130341|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC144153|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK295073|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK055544|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK299746|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##NM_001099407|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC001887|ZNF133|7692|zinc finger protein 133##NM_001083330|ZNF133|7692|zinc finger protein 133##NM_003434|ZNF133|7692|zinc finger protein 133##AK295273|ZNF133|7692|zinc finger protein 133##AK295513|ZNF133|7692|zinc finger protein 133##AK291389|ZNF133|7692|zinc finger protein 133##AK316386|ZNF133|7692|zinc finger protein 133##AK294263|ZNF133|7692|zinc finger protein 133##AK313525|ZNF133|7692|zinc finger protein 133##NM_020536|CSRP2BP|57325|CSRP2 binding protein##BC007537|CSRP2BP|57325|CSRP2 binding protein##BC012588|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##BC016761|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##NM_006466|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK314838|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK096684|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK223298|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK290892|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##U93869|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##DQ892695|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##DQ896169|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##EU446767|RBBP9|10741|retinoblastoma binding protein 9##AL832411|RBBP9|10741|retinoblastoma binding protein 9##AF237576|RBBP9|10741|retinoblastoma binding protein 9##BC020627|RBBP9|10741|retinoblastoma binding protein 9##BC015938|RBBP9|10741|retinoblastoma binding protein 9##NM_006606|RBBP9|10741|retinoblastoma binding protein 9##NM_006363|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_032985|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_032986|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_001172746|SEC23B|10483|Sec23 homolog B (S. cerevisiae)	0.0	
chr2	36549394	36549530	reg1025573.p1	5.587	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-2725117	-	AB020653 NM_015376	-2810521	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-2847766	+	TSC_hg19_v1_chr2_+_36582920 AY358371	33500	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	33940	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	275820	-	BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	0.918618	CTCF.p2:18:0.919
chr9	105393965	105394077	reg1024523.p1	5.587	+	AB075853 BC167432 NM_133445 TSC_hg19_v1_chr9_-_104500930	-893120	-	TSC_hg19_v1_chr9_-_104500218 AB385519 AF416558 AJ416950	-893776	-	AF085237 AF145026 BC066299 AK057524 AK302547 AF400667 BC030595 NM_147180 AK310471	-1036769	-	BC058038 NM_001340 AK313349 BC114547 Z46788	363606	+	TSC_hg19_v1_chr9_+_106856601 AL833191 NM_001042551 NM_006444 BC055081 BC061906 AK307752 AK292599 BC017845 AF092563	1462550	+	TSC_hg19_v1_chr9_+_106856625 AY739716 BC130385 BC144163	1462632	+	AB075853|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##BC167432|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##NM_133445|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AF416558|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AJ416950|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AF085237|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF145026|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC066299|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AK057524|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF400667|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC030595|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##NM_147180|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC058038|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##NM_001340|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##AK313349|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##BC114547|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##Z46788|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##AL833191|SMC2|10592|structural maintenance of chromosomes 2##NM_001042551|SMC2|10592|structural maintenance of chromosomes 2##NM_006444|SMC2|10592|structural maintenance of chromosomes 2##BC055081|SMC2|10592|structural maintenance of chromosomes 2##BC061906|SMC2|10592|structural maintenance of chromosomes 2##AK307752|SMC2|10592|structural maintenance of chromosomes 2##AK292599|SMC2|10592|structural maintenance of chromosomes 2##BC017845|SMC2|10592|structural maintenance of chromosomes 2##AF092563|SMC2|10592|structural maintenance of chromosomes 2##AY739716|SMC2|10592|structural maintenance of chromosomes 2##BC130385|SMC2|10592|structural maintenance of chromosomes 2##BC144163|SMC2|10592|structural maintenance of chromosomes 2	0.891943	CTCF.p2:20:0.892
chr12	4245219	4245399	reg1024283.p1	5.586	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-262809	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-382927	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-383041	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	137735	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	185082	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	243491	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.0	
chr16	67260990	67261143	reg1021466.p2	5.586	+	TSC_hg19_v1_chr16_+_67261032 AF161519 NM_014187 BC003080 BC021109 BC013412	-14	+	NM_001004055 AF176701 AK316602 AK298088	-152	-	BC018785 NM_012163	-346	-	AY192154 AF113615 TSC_hg19_v1_chr16_-_67281385 AB209584 BC033084 AK304232	20282	-	TSC_hg19_v1_chr16_-_67281395 AB041046	20328	-	AK301157 TSC_hg19_v1_chr16_-_67281421 NM_013241	20360	-	AF161519|TMEM208|29100|transmembrane protein 208##NM_014187|TMEM208|29100|transmembrane protein 208##BC003080|TMEM208|29100|transmembrane protein 208##BC021109|TMEM208|29100|transmembrane protein 208##BC013412|TMEM208|29100|transmembrane protein 208##NM_001004055|LRRC29|26231|leucine rich repeat containing 29##AF176701|LRRC29|26231|leucine rich repeat containing 29##AK316602|LRRC29|26231|leucine rich repeat containing 29##AK298088|LRRC29|26231|leucine rich repeat containing 29##BC018785|LRRC29|26231|leucine rich repeat containing 29##NM_012163|LRRC29|26231|leucine rich repeat containing 29##AY192154|FHOD1|29109|formin homology 2 domain containing 1##AF113615|FHOD1|29109|formin homology 2 domain containing 1##AB209584|FHOD1|29109|formin homology 2 domain containing 1##BC033084|FHOD1|29109|formin homology 2 domain containing 1##AK304232|FHOD1|29109|formin homology 2 domain containing 1##AB041046|FHOD1|29109|formin homology 2 domain containing 1##AK301157|FHOD1|29109|formin homology 2 domain containing 1##NM_013241|FHOD1|29109|formin homology 2 domain containing 1	0.0	
chr3	158512903	158513012	reg1024275.p2	5.586	+	TSC_hg19_v1_chr3_-_158450277 NM_002888 NM_206963	-62677	-	U27185 AK130079 TSC_hg19_v1_chr3_-_158450247	-62716	-	DQ891333 DQ893367 DQ894516 DQ896684 BC029640 TSC_hg19_v1_chr3_-_158450211	-62749	-	AK297593 NM_001167903 NM_022736 TSC_hg19_v1_chr3_+_158519875 AK294628 AF351617 BC030542	6837	+	TSC_hg19_v1_chr3_+_158519882 AB014732 BC017661	6922	+	TSC_hg19_v1_chr3_+_158519899 AK297034 BC042197	6938	+	NM_002888|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##NM_206963|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##U27185|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##AK130079|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ891333|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ893367|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ894516|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ896684|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##BC029640|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##AK297593|MFSD1|64747|major facilitator superfamily domain containing 1##NM_001167903|MFSD1|64747|major facilitator superfamily domain containing 1##NM_022736|MFSD1|64747|major facilitator superfamily domain containing 1##AK294628|MFSD1|64747|major facilitator superfamily domain containing 1##AF351617|MFSD1|64747|major facilitator superfamily domain containing 1##BC030542|MFSD1|64747|major facilitator superfamily domain containing 1##AB014732|MFSD1|64747|major facilitator superfamily domain containing 1##BC017661|MFSD1|64747|major facilitator superfamily domain containing 1##AK297034|MFSD1|64747|major facilitator superfamily domain containing 1##BC042197|MFSD1|64747|major facilitator superfamily domain containing 1	0.305249	CTCF.p2:-9:0.305
chr4	28226805	28226901	reg1019040.p1	5.586	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-1364313	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-1641173	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-1734868	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	2495146	+	AB006757 TSC_hg19_v1_chr4_+_30722198	2495341	+	TSC_hg19_v1_chr4_+_30722465 AB006756	2495606	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.516786	CTCF.p2:-22:0.503
chr7	76614114	76614295	reg1018299.p1	5.586	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-357657	-	TSC_hg19_v1_chr7_-_76256148 BC017101	-358001	-	TSC_hg19_v1_chr7_+_76178675 BC078169	-435529	+	BC036053 NM_020879 BX649000 AK292491 HM370402	137742	+	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	214932	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	431514	-	BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC017101|POMZP3|22932|POM121 and ZP3 fusion##BC078169|LOC100133091|100133091|uncharacterized LOC100133091##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)	0.0	
chr7	76614313	76614393	reg1018299.p2	5.586	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-357806	-	TSC_hg19_v1_chr7_-_76256148 BC017101	-358150	-	TSC_hg19_v1_chr7_+_76178675 BC078169	-435678	+	BC036053 NM_020879 BX649000 AK292491 HM370402	137593	+	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	214783	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	431365	-	BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC017101|POMZP3|22932|POM121 and ZP3 fusion##BC078169|LOC100133091|100133091|uncharacterized LOC100133091##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)	0.0	
chr13	113875351	113875510	reg1025994.p2	5.585	+	TSC_hg19_v1_chr13_+_113863926 BC008308 NM_001008895 AB590820 AB178950 AY365124	-11496	+	TSC_hg19_v1_chr13_+_113863089 AL833355 NM_003589 AF077188	-12329	+	TSC_hg19_v1_chr13_-_113862984 CU677649 AK001302 BC031246 AK309321 AF183426 BC016614 AK023313 AK002167 AK289462 AK001185 AK000888 NM_001127202 NM_001127203 NM_018386	-12444	-	TSC_hg19_v1_chr13_+_113951509 NM_005561	76057	+	TSC_hg19_v1_chr13_+_113951553 AK092398 BC025335	76116	+	TSC_hg19_v1_chr13_+_113951612 BC093044 BC021288 AK301584 AB463850 DQ892614 DQ895854	76258	+	BC008308|CUL4A|8451|cullin 4A##NM_001008895|CUL4A|8451|cullin 4A##AB178950|CUL4A|8451|cullin 4A##AY365124|CUL4A|8451|cullin 4A##AL833355|CUL4A|8451|cullin 4A##NM_003589|CUL4A|8451|cullin 4A##AF077188|CUL4A|8451|cullin 4A##AK001302|PCID2|55795|PCI domain containing 2##BC031246|PCID2|55795|PCI domain containing 2##AK309321|PCID2|55795|PCI domain containing 2##AF183426|PCID2|55795|PCI domain containing 2##BC016614|PCID2|55795|PCI domain containing 2##AK023313|PCID2|55795|PCI domain containing 2##AK002167|PCID2|55795|PCI domain containing 2##AK289462|PCID2|55795|PCI domain containing 2##AK001185|PCID2|55795|PCI domain containing 2##AK000888|PCID2|55795|PCI domain containing 2##NM_001127202|PCID2|55795|PCI domain containing 2##NM_001127203|PCID2|55795|PCI domain containing 2##NM_018386|PCID2|55795|PCI domain containing 2##NM_005561|LAMP1|3916|lysosomal-associated membrane protein 1##AK092398|LAMP1|3916|lysosomal-associated membrane protein 1##BC025335|LAMP1|3916|lysosomal-associated membrane protein 1##BC093044|LAMP1|3916|lysosomal-associated membrane protein 1##BC021288|LAMP1|3916|lysosomal-associated membrane protein 1##AK301584|LAMP1|3916|lysosomal-associated membrane protein 1##DQ892614|LAMP1|3916|lysosomal-associated membrane protein 1##DQ895854|LAMP1|3916|lysosomal-associated membrane protein 1	0.210834	CTCF.p2:-17:0.211
chr13	81498184	81498272	reg1026475.p2	5.585	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-583164	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-585186	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-1442673	+	TSC_hg19_v1_chr13_-_84456424 BC051738	2958197	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	2958272	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	4875211	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.071148	
chr2	43397218	43397342	reg1025304.p1	5.585	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-377529	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-405980	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-601383	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	56065	-	TSC_hg19_v1_chr2_-_43453736 BC020369	56450	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	56462	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.763877	CTCF.p2:-12:0.764
chr10	121302865	121303024	reg1004771.p2	5.584	+	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	-754	-	NM_002925	-6900	-	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-335683	+	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	53164	-	TSC_hg19_v1_chr10_-_121356475 AL833106 AK290695	53556	-	TSC_hg19_v1_chr10_-_121356537 BC030025 NM_001033925 NM_003252	53608	-	BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AL833106|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290695|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##BC030025|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##NM_001033925|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##NM_003252|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.0	
chr13	22689321	22689502	reg1021444.p2	5.584	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-444263	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-511051	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-511102	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	1065704	+	TSC_hg19_v1_chr13_-_23949652 AK125458	1260239	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	1318429	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.0	
chr15	78396223	78396403	reg1024982.p1	5.584	+	NM_001101404	-11387	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	-26360	-	TSC_hg19_v1_chr15_-_77924732 AK291363	-471533	-	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	27449	-	TSC_hg19_v1_chr15_+_78441718 AK299970 AK096721 AK296002 BC036227 NM_005530 AK315963 CR749548 BC021967 AK316051	45392	+	TSC_hg19_v1_chr15_+_78441734 AK222973	45421	+	NM_001101404|SH2D7|646892|SH2 domain containing 7##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2##AK299970|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK296002|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC036227|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##NM_005530|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK315963|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##CR749548|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC021967|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK316051|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK222973|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha	0.0	
chr22	22067759	22067875	reg1001035.p2	5.584	+	NM_014337 NM_148175 NM_148176 TSC_hg19_v1_chr22_+_22020298 AF320072 AK289545 BC000022 U37219 AK127259 BC028385 AK299206 CR456548 DQ891659 DQ894846 AB463162 CU013148 CU013436 CU673996 CU688484	-47488	+	TSC_hg19_v1_chr22_+_21996619 CR456570 AF277316 AB528230 BC139837 CU013169 CU013457	-71178	+	TSC_hg19_v1_chr22_+_21996608 BC006248 AB043007	-71216	+	BC034486 BC074501 TSC_hg19_v1_chr22_-_22090057 BC048303 NM_013313 AB098734 AB098735	22231	-	TSC_hg19_v1_chr22_-_22221936 DQ399292 AB384931 EU176323 EU831429 EU831522 AK307615 Z11694 AK090869 BC099905	154012	-	AK295188 TSC_hg19_v1_chr22_-_22221938	154120	-	NM_014337|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148175|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148176|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AF320072|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK289545|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC000022|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##U37219|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK127259|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC028385|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK299206|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456548|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ891659|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ894846|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013148|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013436|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456570|SDF2L1|23753|stromal cell-derived factor 2-like 1##AF277316|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC139837|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013169|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013457|SDF2L1|23753|stromal cell-derived factor 2-like 1##AB043007|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC034486|YPEL1|29799|yippee-like 1 (Drosophila)##BC074501|YPEL1|29799|yippee-like 1 (Drosophila)##BC048303|YPEL1|29799|yippee-like 1 (Drosophila)##NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)##AB098734|YPEL1|29799|yippee-like 1 (Drosophila)##AB098735|YPEL1|29799|yippee-like 1 (Drosophila)##DQ399292|MAPK1|5594|mitogen-activated protein kinase 1##EU176323|MAPK1|5594|mitogen-activated protein kinase 1##EU831429|MAPK1|5594|mitogen-activated protein kinase 1##EU831522|MAPK1|5594|mitogen-activated protein kinase 1##AK307615|MAPK1|5594|mitogen-activated protein kinase 1##Z11694|MAPK1|5594|mitogen-activated protein kinase 1##AK090869|MAPK1|5594|mitogen-activated protein kinase 1##BC099905|MAPK1|5594|mitogen-activated protein kinase 1##AK295188|MAPK1|5594|mitogen-activated protein kinase 1	0.011017	
chr7	20257069	20257250	reg1026313.p2	5.584	+	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	-179	-	BX648384 NM_152774	-444756	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	-508513	-	AK295044 TSC_hg19_v1_chr7_+_20370337	113178	+	BC002630 NM_002214 M73780	113575	+	AB353947 NM_001163941 AY230001	398138	+	BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##AK295044|ITGB8|3696|integrin, beta 8##BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8##AB353947|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163941|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY230001|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	0.065952	
chr1	147592845	147592966	reg1028117.p1	5.583	+	NM_001097616	-167339	+	TSC_hg19_v1_chr1_+_147400563 BC146880 AK316371 BC003187 AB528816 DQ890650 DQ893830 BT006679	-192304	+	TSC_hg19_v1_chr1_+_147400532 AK021758 NM_016334 AL133020 AY358966 AB097024 AB097025 AK223223 AK299995 AK302266 BC067816 AF132947 U78723	-192383	+	AF419617 NM_001101663	17175	-	BX648497 TSC_hg19_v1_chr1_-_147624379	31440	-	TSC_hg19_v1_chr1_-_147624593 BC136292 NM_183372	31611	-	NM_001097616|GPR89C|728932|G protein-coupled receptor 89C##BC146880|GPR89A|653519|G protein-coupled receptor 89A##AK316371|GPR89A|653519|G protein-coupled receptor 89A##BC003187|GPR89A|653519|G protein-coupled receptor 89A##DQ890650|GPR89B|51463|G protein-coupled receptor 89B##DQ893830|GPR89A|653519|G protein-coupled receptor 89A##BT006679|GPR89A|653519|G protein-coupled receptor 89A##AK021758|GPR89A|653519|G protein-coupled receptor 89A##NM_016334|GPR89B|51463|G protein-coupled receptor 89B##AL133020|GPR89B|51463|G protein-coupled receptor 89B##AY358966|GPR89A|653519|G protein-coupled receptor 89A##AB097024|GPR89A|653519|G protein-coupled receptor 89A##AB097025|GPR89A|653519|G protein-coupled receptor 89A##AK223223|GPR89A|653519|G protein-coupled receptor 89A##AK299995|GPR89A|653519|G protein-coupled receptor 89A##AK302266|GPR89B|51463|G protein-coupled receptor 89B##BC067816|GPR89A|653519|G protein-coupled receptor 89A##AF132947|GPR89A|653519|G protein-coupled receptor 89A##U78723|GPR89B|51463|G protein-coupled receptor 89B##AF419617|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_001101663|NBPF24|728912|neuroblastoma breakpoint family, member 24##BX648497|NBPF11|200030|neuroblastoma breakpoint family, member 11##BC136292|NBPF11|200030|neuroblastoma breakpoint family, member 11##NM_183372|NBPF11|200030|neuroblastoma breakpoint family, member 11	0.97652	CTCF.p2:-25:0.977
chr11	83667253	83667410	reg1026849.p1	5.583	+	AK299778 CR933674 NM_001142702	-273880	-	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	-669926	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	-670298	-	AK294375 AK126776 AK295624 NM_001142700	316945	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	361050	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	966901	-	AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)	0.814224	CTCF.p2:17:0.814
chr12	110809315	110809407	reg1024725.p1	5.583	+	TSC_hg19_v1_chr12_+_110719528 M23114 BC035588 M23115 CU690124	-89993	+	TSC_hg19_v1_chr12_+_110719041 NM_001681 NM_170665	-90326	+	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	-247140	+	TSC_hg19_v1_chr12_-_110841470 BC098264 BC098295 BC098362 BC099732 BC111798 AF191340 BC148236 BC040130	32078	-	TSC_hg19_v1_chr12_-_110841526 BC141848 AK021809 NM_001137664 NM_016238	32150	-	TSC_hg19_v1_chr12_-_110888079 AF006086	78724	-	M23114|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC035588|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23115|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_001681|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_170665|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC098264|ANAPC7|51434|anaphase promoting complex subunit 7##BC098295|ANAPC7|51434|anaphase promoting complex subunit 7##BC098362|ANAPC7|51434|anaphase promoting complex subunit 7##BC099732|ANAPC7|51434|anaphase promoting complex subunit 7##BC111798|ANAPC7|51434|anaphase promoting complex subunit 7##AF191340|ANAPC7|51434|anaphase promoting complex subunit 7##BC148236|ANAPC7|51434|anaphase promoting complex subunit 7##BC040130|ANAPC7|51434|anaphase promoting complex subunit 7##BC141848|ANAPC7|51434|anaphase promoting complex subunit 7##AK021809|ANAPC7|51434|anaphase promoting complex subunit 7##NM_001137664|ANAPC7|51434|anaphase promoting complex subunit 7##NM_016238|ANAPC7|51434|anaphase promoting complex subunit 7##AF006086|ARPC3|10094|actin related protein 2/3 complex, subunit 3, 21kDa	0.0	
chr14	107083102	107083251	reg1028043.p1	5.583	+	DQ454429 DQ454922 HM116180 EF091913 EF175413 GQ232868 GQ232976 EF583666 EF407827 EF407822 AJ007320 AF308556 AF103132 HM774392 HQ703981 JN110710 JN111102 HM774550 AY393601 AY393649 AY393679 EU099114 EU099216 DQ100711 AB066834 AF174037 AY050706 DQ005304 FJ492918 HM994925 HQ689790 Z80842 DQ524125 DQ535395 HQ378413 DQ100675 HM996225 AB067078 AY866569 AY971062 DQ065681 DQ926239 EF028212 HM994895 HM994932 HM994933 HM994938 HM994946 HM994963 HM994965 HM995218 HM995258 HM995267 HM995314 HM996512 HM996546 AF021955 GU570262 AF062174 AF062225 AF062279 TSC_hg19_v1_chr14_-_107078867	-4451	-	AB063741 AY393018 AF062170 AY393124 Z47215 AK126281 TSC_hg19_v1_chr14_-_107066261	-17012	-	AF028099 AF460754 DQ454615 DQ523869 GQ232779 GQ232881 GU552765 FJ873979 FJ873984 FJ874049 FJ874062 FJ874084 DQ454628 AY003743 AY003830 DQ523889 DQ523867 DQ454655 DQ523892 DQ523925 FJ840112 FJ840322 FJ873963 DQ454805 DQ523873 FJ840063 FJ840064 FJ840091 FJ840093 FJ840096 FJ840098 FJ840147 FJ840240 FJ840275 FJ840277 FJ840278 FJ840279 FJ840280 FJ840281 FJ840282 FJ840283 FJ840285 FJ840286 FJ840288 FJ840289 FJ840290 FJ840291 FJ840294 FJ840296 FJ840298 FJ840299 FJ840300 FJ840301 FJ840303 FJ873817 FJ873838 FJ873840 FJ873886 FJ873926 FJ873934 FJ874029 FJ874031 FJ874050 FJ874058 AJ008233 DQ523926 AY003838 AY003851 EF175410 EF091918 EU667609 JF810270 EU099077 EU099148 AF103213 AJ010335 AM183984 DQ097899 HM774214 EF555586 AF062229 FJ385338 FJ385339 FJ385347 GQ504915 GQ504957 HM774086 HM774115 HM774155 HM774774 EU146321 S73143 U85229 AY062306 AF035787 AF035788 DQ100793 DQ100813 AY941912 DQ187711 DQ524134 DQ926275 HM995353 HM995355 HM995441 HM995442 HM995443 HM995444 HM995445 HM995446 HM995470 HM995471 HM995475 HM995476 HM996019 HM996347 DQ187673 DQ322745 DQ322877 DQ322968 DQ322969 DQ322970 DQ322971 DQ322972 U00540 AB373623 AY530312 AY530316 AY686913 AY941884 AY986398 DQ100978 DQ926080 DQ926111 DQ926299 DQ926303 DQ926575 DQ926577 DQ926583 DQ926598 AB066888 AB067000 AB363089 AB363160 AB373617 AB373626 AF006517 AF006525 AF035042 AF174059 AF471510 AF471512 AF471528 AF471529 AF471530 AJ389169 AJ488540 AJ556641 AJ579109 AJ579266 AY640512 AY686909 AY941887 AY941891 AY941915 DQ535286 DQ535377 DQ535410 DQ926146 DQ926152 DQ926467 EF177944 EF177957 EF178005 EF178011 EF178016 EF178078 EF178107 FJ195522 FJ773245 FJ773246 GU570355 HM152495 HM152503 HM152507 HM451460 S76131 U00490 U00498 U00567 X62958 X64243 X77472 X99353 Z33902 Z33904 Z96964 M18520 M18521 HM995907 AY393055 AF062122 AJ548507 AY190822 X81724 X81730 X81735 L08085 BC072419 X61011 AK092785 AX747729 TSC_hg19_v1_chr14_-_107049194	-34231	-	AF460776 EF583680 DQ454729 DQ454436 HM995491 DQ454495 DQ454638 DQ454782 DQ523857 DQ454730 DQ454735 DQ454736 DQ454850 DQ454463 DQ454626 DQ454634 DQ454779 AY003758 DQ454909 AY003782 DQ454387 DQ454439 DQ454443 DQ454491 DQ454630 DQ454640 DQ454657 DQ454658 DQ454693 DQ454996 DQ523865 DQ523866 DQ523904 DQ523907 GU552723 GU552763 DQ454683 DQ454954 AY003756 AY003861 DQ454803 DQ454883 DQ454908 DQ454931 DQ454981 Z30558 Z30559 Z30575 Z30577 Z30579 Z30673 DQ454894 HM995480 DQ454567 DQ454586 DQ454595 DQ454611 DQ454623 DQ454649 DQ454661 DQ454790 DQ454858 DQ454930 DQ454940 DQ523860 M18514 AY003863 AY003854 DQ454390 DQ454444 DQ454650 DQ454684 DQ454709 DQ454717 DQ454721 DQ454733 DQ454737 DQ454855 DQ454887 DQ454933 DQ454936 DQ454963 DQ454984 DQ454994 DQ523863 DQ454447 DQ454504 DQ454539 DQ454596 DQ454609 DQ454613 DQ454619 DQ454633 DQ454656 DQ454672 DQ454720 DQ454886 DQ454942 DQ454972 DQ454977 HM116187 DQ454605 DQ454646 DQ454702 DQ454703 DQ454851 HM116123 HM116135 HM116139 HM116144 HM116147 HM116154 HM116217 AY003860 DQ454602 DQ454880 DQ454822 DQ454825 EF091925 EF175400 EF175422 EF175440 EF583671 EU667610 EU814956 GQ232848 GQ232850 GQ232880 DQ454435 EU099241 EU099155 EU099196 AY577297 AY393172 DQ523932 DQ524057 EU099215 EU099224 AM183980 AY393168 AY393171 AY393176 AY393177 AY393178 AM279541 AF103075 AF103349 AF103054 AY180386 AF103162 FJ385403 JN110682 JN110887 AF103140 FJ385332 FJ385336 FJ385376 FJ385404 FJ385416 FJ385417 FJ385421 GQ504863 L26904 AF103343 AF103091 EU620035 AF103271 EU146313 U00585 EU620063 DQ926547 AY062314 U00553 U00557 AF103164 AF103228 DQ005270 HM995488 AY671631 HM996467 AJ245067 DQ523945 DQ523951 DQ523954 DQ523969 DQ523970 DQ523977 DQ523979 DQ524002 DQ524011 DQ524015 DQ524019 DQ524040 DQ524042 DQ524043 DQ524052 DQ524055 DQ524072 DQ524087 DQ524090 DQ524092 DQ524099 DQ524100 DQ524104 DQ524108 DQ524110 DQ524124 DQ524133 AM233755 DQ926051 DQ926252 AB067262 AJ300799 AY671719 AY941873 AY944692 AY944703 AY944704 AY944722 DQ005289 DQ005293 DQ005305 EF178085 FJ385391 HM995323 HM995324 HM995327 HM995330 HM995345 HM995347 HM995388 HM995403 HM995478 HM995483 HM995484 HM995485 HM995486 HM995487 HM995498 HM995499 HM995500 HM995502 HM995534 HM995551 HM995556 HM995557 HM995559 HM995560 HM995932 HM995933 HM995957 HM995994 HM996010 HM996122 HM996155 HM996464 HM996496 AB063721 AB063723 AB063729 AB063744 AB063787 AB063920 AB066903 AB066912 AB066913 AB067270 AB067272 AB067275 AB067296 AF021963 AF035041 AF062230 AF174018 AF174072 AF174080 AF174097 AF174119 AJ006351 AJ239343 AJ244983 AJ245027 AJ413991 AJ413998 AJ413999 AJ574780 AM279612 AY345917 AY640510 AY670733 AY670744 AY670820 AY670910 AY670915 AY670930 AY670942 AY670967 AY670984 AY671004 AY671056 AY671062 AY671072 AY671075 AY671076 AY671082 AY671085 AY671088 AY671194 AY671221 AY671255 AY671326 AY671337 AY671343 AY671346 AY671353 AY671356 AY671359 AY671373 AY671376 AY671378 AY671394 AY671456 AY671457 AY671458 AY671459 AY671460 AY671463 AY671467 AY671470 AY671472 AY671473 AY671476 AY671485 AY671488 AY671493 AY671494 AY671575 AY671588 AY671589 AY671601 AY671606 AY671628 AY671645 AY671666 AY671667 AY671674 AY671692 AY671710 AY671715 AY671717 AY671759 AY866865 AY986386 AY986387 AY986388 AY986389 AY986390 DQ005263 DQ005287 DQ005288 DQ100795 DQ328873 DQ431484 DQ431485 DQ926085 DQ926130 DQ926178 DQ926219 DQ926256 DQ926258 DQ926290 DQ926310 DQ926368 DQ926395 DQ926514 DQ926572 DQ926640 DQ926644 EU794431 FJ385318 FJ456850 GU570380 GU570382 HQ378396 HQ689744 JF806450 L12189 L12197 L23516 L23517 L23563 S73508 U00486 U00493 U31937 U43927 U51549 U95241 U96283 X98749 Z70613 Z70615 Z70628 Z70629 Z70651 Z70652 Z70653 Z70658 Z74672 Z74674 Z74681 Z74682 Z74683 Z74684 Z74685 Z74686 Z74687 Z74688 Z74689 Z74690 DQ926105 AY686879 AY944715 DQ535399 DQ535425 DQ535434 DQ535441 DQ535468 DQ535469 DQ535474 EF177985 EF178038 EF178125 HM996104 HM996425 HM996431 HM996435 Z14199 Z75403 AY392942 AY393076 AY393081 AY393082 Z47242 AY671167 AF062106 AF062108 AF062109 AF062126 AF062129 AF062132 AF062144 AF062166 AF062185 AF062209 AF062228 AF062252 AF062266 AY671032 AY671186 AY671196 AY671241 AY671258 AY671290 AY671296 M88500 S46247 U44791 U86525 X52111 Z11958 Z47349 Z75395 M18518 BC066594 S50735 TSC_hg19_v1_chr14_-_107083721 AK097365 X67906 X69860 X69866 AK097362 BX248300 AK125079	401	-	S76904 AM279575 EU619960 JN110911 JN111008 HM774600 HM774602 AF103144 AF103285 AY866748 AY866803 DQ187673 DQ187733 DQ322974 DQ840851 DQ840858 DQ840864 AF006522 AF233250 AF471440 EF177980 EU835549 AB063812 AJ399808 AJ579268 DQ205169 DQ535364 DQ535448 DQ926460 Z98683 Z98702 AJ519260 AJ519262 AJ519304 AY392915 AF062171 TSC_hg19_v1_chr14_-_107099662 AK097355 AK097366 AK093636 AK097572 AX748235	16347	-	DQ454926 GU552751 DQ523845 DQ454743 DQ454741 FJ873884 FJ873949 FJ874082 DQ454745 AY003790 EU350425 EU667608 EF407835 DQ454756 DQ454758 DQ322814 AF343367 AF343413 AF103266 AJ007443 AF103288 FJ385341 AF103034 AF103338 AF062236 JN110970 L03820 HM774324 HM774398 HM774726 HM774904 HM774928 L33041 HM775043 AF408742 AF485449 AF078936 AF485451 AF485453 AF485455 EF633815 DQ524036 DQ524153 DQ926062 HM995709 HM995710 HM995711 HM995712 HM995713 HM995863 HM995864 HM995866 DQ322813 HM996268 AJ245306 AY044149 DQ100802 DQ100910 DQ926129 AB063797 AB063898 AB063899 AF022008 AF099199 AF398961 AF471517 AF471518 AF471519 AF471520 AJ224899 AJ399811 AY554175 AY640527 DQ065678 DQ535356 DQ779565 DQ779566 FJ385288 FN563805 FN563806 FN563810 FN563812 FN563827 FN563828 HQ689733 JF806286 X77017 L48239 AY392926 AY393064 AY452138 X65898 X81752 X81753 BC073782 AF067420 TSC_hg19_v1_chr14_-_107114275 AK097071	30933	-	AK126281|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC072419|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC066594|IGH@|3492|immunoglobulin heavy locus##AK097365|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097362|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125079|IGH@|3492|immunoglobulin heavy locus##AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK097366|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC073782|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF067420|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.990988	CTCF.p2:-12:0.991
chr2	177503020	177503128	reg1023555.p2	5.583	+	BC013438 TSC_hg19_v1_chr2_-_177502718	-386	-	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-368835	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-449658	+	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	574400	+	AK311688 NM_001145412 NM_001145413	625497	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	626302	-	BC013438|LOC375295|375295|uncharacterized LOC375295##NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.593071	CTCF.p2:-17:0.593
chr3	136024853	136024966	reg1023608.p1	5.583	+	S67325 TSC_hg19_v1_chr3_+_135969193 BC013768 AB209009 BC053661 AK295312 AK130359 AK225733 AK303079 AK225215 AL831978 CU680676	-55707	+	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	-55745	+	TSC_hg19_v1_chr3_-_135914658 AK091956 NM_018133	-110228	-	TSC_hg19_v1_chr3_-_136471221 BC040708 AB210023 AK309934 BC064699 CR749247 NM_005862	446306	-	BC050423 NM_001097599 NM_001097600 NM_025246 TSC_hg19_v1_chr3_+_136537897 BC022557 AK314079 BC000111 AL136661	513010	+	TSC_hg19_v1_chr3_+_136581071 NM_006153 BC006403	556131	+	S67325|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC013768|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AB209009|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC053661|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK295312|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK130359|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225733|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK303079|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225215|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AL831978|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK091956|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_018133|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##BC040708|STAG1|10274|stromal antigen 1##AB210023|STAG1|10274|stromal antigen 1##AK309934|STAG1|10274|stromal antigen 1##BC064699|STAG1|10274|stromal antigen 1##CR749247|STAG1|10274|stromal antigen 1##NM_005862|STAG1|10274|stromal antigen 1##BC050423|TMEM22|80723|transmembrane protein 22##NM_001097599|TMEM22|80723|transmembrane protein 22##NM_001097600|TMEM22|80723|transmembrane protein 22##NM_025246|TMEM22|80723|transmembrane protein 22##BC022557|TMEM22|80723|transmembrane protein 22##AK314079|TMEM22|80723|transmembrane protein 22##BC000111|TMEM22|80723|transmembrane protein 22##AL136661|TMEM22|80723|transmembrane protein 22##NM_006153|NCK1|4690|NCK adaptor protein 1##BC006403|NCK1|4690|NCK adaptor protein 1	0.676474	CTCF.p2:-2:0.676
chr3	63947614	63947744	reg1026727.p1	5.583	+	NM_001177387	-63605	+	TSC_hg19_v1_chr3_+_63850212 AF032104 AF032105 NM_000333 AJ000517	-97471	+	TSC_hg19_v1_chr3_-_63849703 AK027098 AF104914 NM_025075	-98023	-	NM_001128149 AK310745 AK304062	5778	+	AF530062 AB463196 TSC_hg19_v1_chr3_-_64009149 BC000630 AK095059 AY568086 D14663 NM_014814 BC012369 BC000904 AK290205 BX647742 AF215935	61471	-	BC119002 AL833539 NM_198859	263441	-	NM_001177387|ATXN7|6314|ataxin 7##AF032104|ATXN7|6314|ataxin 7##AF032105|ATXN7|6314|ataxin 7##NM_000333|ATXN7|6314|ataxin 7##AJ000517|ATXN7|6314|ataxin 7##AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)##AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)##NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)##NM_001128149|ATXN7|6314|ataxin 7##AK310745|ATXN7|6314|ataxin 7##AK304062|ATXN7|6314|ataxin 7##AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)##NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)	0.2181	CTCF.p2:6:0.218
chr8	11828152	11828247	reg1023490.p1	5.583	+	TSC_hg19_v1_chr8_-_11725628 NM_001908 NM_147780 NM_147781 NM_147782 NM_147783	-102501	-	TSC_hg19_v1_chr8_-_11725624 AK075393	-102575	-	AK092070 AK130184 AK290239 AK297687 BC095408 TSC_hg19_v1_chr8_-_11725597 AK296845 BX647952	-102602	-	AY621333 DQ012026 NM_001033018	3908	-	AY621332 DQ012025 NM_001033017	11630	+	AY621331 DQ012024 NM_001033019 BC130461 BC130463	25590	-	NM_001908|CTSB|1508|cathepsin B##NM_147780|CTSB|1508|cathepsin B##NM_147781|CTSB|1508|cathepsin B##NM_147782|CTSB|1508|cathepsin B##NM_147783|CTSB|1508|cathepsin B##AK075393|CTSB|1508|cathepsin B##AK092070|CTSB|1508|cathepsin B##AK130184|CTSB|1508|cathepsin B##AK290239|CTSB|1508|cathepsin B##AK297687|CTSB|1508|cathepsin B##BC095408|CTSB|1508|cathepsin B##AK296845|CTSB|1508|cathepsin B##BX647952|CTSB|1508|cathepsin B##AY621333|DEFB136|613210|defensin, beta 136##DQ012026|DEFB136|613210|defensin, beta 136##NM_001033018|DEFB136|613210|defensin, beta 136##AY621332|DEFB135|613209|defensin, beta 135##DQ012025|DEFB135|613209|defensin, beta 135##NM_001033017|DEFB135|613209|defensin, beta 135##AY621331|DEFB134|613211|defensin, beta 134##DQ012024|DEFB134|613211|defensin, beta 134##NM_001033019|DEFB134|613211|defensin, beta 134##BC130461|DEFB134|613211|defensin, beta 134##BC130463|DEFB134|613211|defensin, beta 134	0.1916	
chr8	119724787	119724881	reg1024933.p1	5.583	+	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	-90627	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	-90709	-	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	-600873	-	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	239386	-	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	354635	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	495805	+	NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)	0.540804	CTCF.p2:76:0.358
chr8	30404875	30404997	reg1020789.p1	5.583	+	NM_001008710 NM_001008711 NM_001008712 NM_006867 AK304858 D84107 D84108 D84109 D84110 TSC_hg19_v1_chr8_+_30242056 BC003608	-162927	+	Z36874 TSC_hg19_v1_chr8_+_30209759	-195199	+	D84145 NM_006571 TSC_hg19_v1_chr8_+_30013882 AK314128 BC013175 CR456851	-391081	+	NM_001206847	91180	+	S67861 TSC_hg19_v1_chr8_-_30515718 X63469 BC030572 BC001775 NM_002095	110800	-	BC035691 TSC_hg19_v1_chr8_-_30585320 X15722 AB519179 AB519180 AB519181 AF228704 CU686724	180350	-	NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing##NM_006867|RBPMS|11030|RNA binding protein with multiple splicing##AK304858|RBPMS|11030|RNA binding protein with multiple splicing##D84107|RBPMS|11030|RNA binding protein with multiple splicing##D84108|RBPMS|11030|RNA binding protein with multiple splicing##D84109|RBPMS|11030|RNA binding protein with multiple splicing##D84110|RBPMS|11030|RNA binding protein with multiple splicing##BC003608|RBPMS|11030|RNA binding protein with multiple splicing##D84145|DCTN6|10671|dynactin 6##NM_006571|DCTN6|10671|dynactin 6##AK314128|DCTN6|10671|dynactin 6##BC013175|DCTN6|10671|dynactin 6##CR456851|DCTN6|10671|dynactin 6##NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341##S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC035691|GSR|2936|glutathione reductase##X15722|GSR|2936|glutathione reductase##AB519179|GSR|2936|glutathione reductase##AB519180|GSR|2936|glutathione reductase##AB519181|GSR|2936|glutathione reductase##AF228704|GSR|2936|glutathione reductase	0.971764	CTCF.p2:-13:0.972
chr9	22244264	22244372	reg1022591.p1	5.583	+	TSC_hg19_v1_chr9_+_22113543 BC038540	-130709	+	AF004819 U17075 L36844 BC014469 TSC_hg19_v1_chr9_-_22009305 NM_004936 NM_078487	-235028	-	TSC_hg19_v1_chr9_-_21994420 AB464504 S78535 NM_058195 U38945	-249867	-	TSC_hg19_v1_chr9_+_22446846 AK096011 NM_022160 BC130435 BC130437	202519	+	AB464510 TSC_hg19_v1_chr9_+_22447162	202795	+	AJ290954 TSC_hg19_v1_chr9_+_22447458 AK130018	203131	+	BC038540|CDKN2B-AS|100048912|CDKN2B antisense RNA (non-protein coding)##AF004819|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##U17075|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##L36844|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##BC014469|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##NM_004936|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##NM_078487|CDKN2B|1030|cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)##S78535|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_058195|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##U38945|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##AK096011|DMRTA1|63951|DMRT-like family A1##NM_022160|DMRTA1|63951|DMRT-like family A1##BC130435|DMRTA1|63951|DMRT-like family A1##BC130437|DMRTA1|63951|DMRT-like family A1##AJ290954|DMRTA1|63951|DMRT-like family A1##AK130018|DMRTA1|63951|DMRT-like family A1	0.431688	CTCF.p2:-3:0.432
chr15	30040161	30040298	reg1026021.p1	5.582	+	NM_015307	-177303	-	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	-478200	-	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	-478259	-	AK304758 TSC_hg19_v1_chr15_-_30114336	74113	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	74394	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	645483	-	NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion	0.369761	CTCF.p2:14:0.370
chr2	130939749	130939854	reg1022598.p2	5.582	+	TSC_hg19_v1_chr2_+_130939768 BC066296	-39	+	NM_025029	-301	+	TSC_hg19_v1_chr2_-_130939163 BC064947 AK000304 AK303519 AK303427 AK301576 AK056501 AK298609 EU367941 AK299185 AK297257 NM_001171083 NM_017751 NM_017951	-564	-	TSC_hg19_v1_chr2_+_130939834 HQ258550 BC014255	18	+	AK131043 BC057811 NM_207312	16221	-	TSC_hg19_v1_chr2_+_130986934 AK297320	47133	+	BC066296|MZT2B|80097|mitotic spindle organizing protein 2B##NM_025029|MZT2B|80097|mitotic spindle organizing protein 2B##BC064947|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK000304|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK303519|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK303427|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK301576|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK056501|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK298609|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##EU367941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK299185|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK297257|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_001171083|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_017751|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_017951|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##BC014255|MZT2B|80097|mitotic spindle organizing protein 2B##AK131043|TUBA3E|112714|tubulin, alpha 3e##BC057811|TUBA3E|112714|tubulin, alpha 3e##NM_207312|TUBA3E|112714|tubulin, alpha 3e	0.947125	CTCF.p2:10:0.947
chr4	253158	253304	reg1027961.p1	5.582	+	TSC_hg19_v1_chr4_+_124389 AK096662 AL833758 BC104026 BC104028	-128857	+	TSC_hg19_v1_chr4_+_53214 AK300505 AK311343 BC036110 BC043151 AK301848 AK309855 AK056302 BC020836 BC009008 BX537887 NM_182524	-200007	+	None	None	None	AK302099 NM_001137608	36712	-	TSC_hg19_v1_chr4_+_331602 NM_003441	78364	+	TSC_hg19_v1_chr4_+_331608 BC036854 BC057244 L15309 BC074853	78439	+	AK096662|ZNF718|255403|zinc finger protein 718##AL833758|ZNF718|255403|zinc finger protein 718##BC104026|ZNF718|255403|zinc finger protein 718##BC104028|ZNF718|255403|zinc finger protein 718##AK300505|ZNF595|152687|zinc finger protein 595##BC036110|ZNF595|152687|zinc finger protein 595##BC043151|ZNF595|152687|zinc finger protein 595##AK301848|ZNF595|152687|zinc finger protein 595##AK309855|ZNF595|152687|zinc finger protein 595##AK056302|ZNF595|152687|zinc finger protein 595##BC020836|ZNF718|255403|zinc finger protein 718##BX537887|ZNF595|152687|zinc finger protein 595##NM_182524|ZNF595|152687|zinc finger protein 595##AK302099|ZNF732|654254|zinc finger protein 732##NM_001137608|ZNF732|654254|zinc finger protein 732##NM_003441|ZNF141|7700|zinc finger protein 141##BC036854|ZNF141|7700|zinc finger protein 141##BC057244|ZNF141|7700|zinc finger protein 141##L15309|ZNF141|7700|zinc finger protein 141##BC074853|ZNF141|7700|zinc finger protein 141	0.802259	CTCF.p2:-16:0.802
chr8	95976248	95976354	reg1022951.p2	5.582	+	TSC_hg19_v1_chr8_-_95961604 AK315071 AF409114 AF409115 AK125880 NM_001135733 NM_033285	-14644	-	TSC_hg19_v1_chr8_-_95907430 BC007015 BC020729 NM_057749	-68849	-	TSC_hg19_v1_chr8_+_95835588 BC136754 BC144396 BC144397	-140601	+	TSC_hg19_v1_chr8_+_96037224 NM_152416 BC028166 DQ891641 DQ894830 AK298631 AK301414	61003	+	TSC_hg19_v1_chr8_+_96145948 NM_024613	169644	+	TSC_hg19_v1_chr8_+_96146012 AL834473 BC011806	169707	+	AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##BC007015|CCNE2|9134|cyclin E2##BC020729|CCNE2|9134|cyclin E2##NM_057749|CCNE2|9134|cyclin E2##BC136754|INTS8|55656|integrator complex subunit 8##BC144396|INTS8|55656|integrator complex subunit 8##BC144397|INTS8|55656|integrator complex subunit 8##NM_152416|C8orf38|137682|chromosome 8 open reading frame 38##BC028166|C8orf38|137682|chromosome 8 open reading frame 38##DQ891641|C8orf38|137682|chromosome 8 open reading frame 38##DQ894830|C8orf38|137682|chromosome 8 open reading frame 38##AK298631|C8orf38|137682|chromosome 8 open reading frame 38##AK301414|C8orf38|137682|chromosome 8 open reading frame 38##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##AL834473|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC011806|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2	0.0	
chr12	57881575	57881755	reg1025844.p1	5.581	+	AK304107 AB051853 NM_032496	-8035	-	TSC_hg19_v1_chr12_-_57873391 AK092763 AX747713 NM_001080157	-8271	-	AK301095 AK057573 AB030239 NM_001080156	-9986	-	NM_004990 TSC_hg19_v1_chr12_+_57881850 BC065187 AK293945 AK303349 D84224	127	+	AK092986 AK222767 AX747839 TSC_hg19_v1_chr12_+_57881853 AK290857 BC011639 X94754 BC002384 BC006328 BC011849 AB590802 BT007338 BC015011	214	+	TSC_hg19_v1_chr12_-_57914295 AK316581 BC003637 BC107859 S40706 AY461580 NM_001195053 NM_001195054 NM_001195055 NM_001195056 NM_001195057 NM_004083	32629	-	AK304107|ARHGAP9|64333|Rho GTPase activating protein 9##AB051853|ARHGAP9|64333|Rho GTPase activating protein 9##NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9##AK092763|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9##AK301095|ARHGAP9|64333|Rho GTPase activating protein 9##AK057573|ARHGAP9|64333|Rho GTPase activating protein 9##AB030239|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080156|ARHGAP9|64333|Rho GTPase activating protein 9##NM_004990|MARS|4141|methionyl-tRNA synthetase##BC065187|MARS|4141|methionyl-tRNA synthetase##AK293945|MARS|4141|methionyl-tRNA synthetase##AK303349|MARS|4141|methionyl-tRNA synthetase##D84224|MARS|4141|methionyl-tRNA synthetase##AK092986|MARS|4141|methionyl-tRNA synthetase##AK222767|MARS|4141|methionyl-tRNA synthetase##AK290857|MARS|4141|methionyl-tRNA synthetase##BC011639|MARS|4141|methionyl-tRNA synthetase##X94754|MARS|4141|methionyl-tRNA synthetase##BC002384|MARS|4141|methionyl-tRNA synthetase##BC006328|MARS|4141|methionyl-tRNA synthetase##BC011849|MARS|4141|methionyl-tRNA synthetase##BT007338|MARS|4141|methionyl-tRNA synthetase##BC015011|MARS|4141|methionyl-tRNA synthetase##AK316581|DDIT3|1649|DNA-damage-inducible transcript 3##BC003637|DDIT3|1649|DNA-damage-inducible transcript 3##BC107859|DDIT3|1649|DNA-damage-inducible transcript 3##S40706|DDIT3|1649|DNA-damage-inducible transcript 3##AY461580|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195053|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195054|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195055|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195056|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195057|DDIT3|1649|DNA-damage-inducible transcript 3##NM_004083|DDIT3|1649|DNA-damage-inducible transcript 3	0.0	
chr4	42304504	42304681	reg1024641.p1	5.581	+	AB126828 AB126829 NM_001159547 NM_207406	-149698	-	TSC_hg19_v1_chr4_-_42154719 AK125953 AB463533	-149936	-	TSC_hg19_v1_chr4_-_42154134 BC128592 BC128593	-150432	-	NM_001080505	95263	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	354496	-	AB528853 NM_001080476	590689	+	AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##AK125953|BEND4|389206|BEN domain containing 4##BC128592|BEND4|389206|BEN domain containing 4##BC128593|BEND4|389206|BEN domain containing 4##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1	0.988761	CTCF.p2:-10:0.989
chr15	102042200	102042329	reg1028858.p1	5.580	+	TSC_hg19_v1_chr15_-_102030140 NM_002570 NM_138319 NM_138320 NM_138321 NM_138322 NM_138323 NM_138324 NM_138325	-12102	-	TSC_hg19_v1_chr15_-_102029995 M80482 M80482	-12231	-	TSC_hg19_v1_chr15_-_102029982 D87993 D87994 D87995	-12309	-	TSC_hg19_v1_chr15_-_102192580 BC006150 BC008873 AF353992 AK315584 AK297048 AK026257 AK296553 NM_025141 NM_078474	150202	-	TSC_hg19_v1_chr15_-_102264638 BC132671 BC136315 BC143943 AK056653 AX721055 NM_152334	222391	-	BC137002 BC137003 NM_001005326	303647	+	NM_002570|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138319|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138320|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138321|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138322|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138323|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138324|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138325|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87993|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87994|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87995|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##BC006150|TM2D3|80213|TM2 domain containing 3##BC008873|TM2D3|80213|TM2 domain containing 3##AF353992|TM2D3|80213|TM2 domain containing 3##AK315584|TM2D3|80213|TM2 domain containing 3##AK297048|TM2D3|80213|TM2 domain containing 3##AK026257|TM2D3|80213|TM2 domain containing 3##AK296553|TM2D3|80213|TM2 domain containing 3##NM_025141|TM2D3|80213|TM2 domain containing 3##NM_078474|TM2D3|80213|TM2 domain containing 3##BC132671|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC136315|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC143943|TARSL2|123283|threonyl-tRNA synthetase-like 2##AK056653|TARSL2|123283|threonyl-tRNA synthetase-like 2##NM_152334|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	0.971045	CTCF.p2:3:0.971
chr4	156680115	156680295	reg1024498.p2	5.580	+	NM_000857 TSC_hg19_v1_chr4_+_156680190 AK315944 AK300296 AK315199 AK296680 AK307838 BC026332 BC060835 BC047620 X66533 AF020340	-1	+	TSC_hg19_v1_chr4_+_156588813 NM_001130684 BC028384	-91388	+	NM_000856 NM_001130682 NM_001130686 NM_001130687 X66534 Y15723 AK312952 BC095395 TSC_hg19_v1_chr4_+_156587999 AK309950 AK096588 NM_001130683 NM_001130685 BX649180 AK226125 BX647200 BC012627	-92030	+	TSC_hg19_v1_chr4_+_156680603 AK299916	401	+	AB528059 AJ252011 NM_017419	107195	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	144672	+	NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##NM_001130684|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC028384|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_000856|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130682|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130686|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130687|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##X66534|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##Y15723|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK312952|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC095395|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK309950|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK096588|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130683|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130685|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BX649180|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK226125|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BX647200|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC012627|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK299916|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase	0.0	
chr9	95882251	95882379	reg1023209.p1	5.580	+	BC091476 TSC_hg19_v1_chr9_+_95858566	-23736	+	NM_032310 TSC_hg19_v1_chr9_+_95858498 AK057716 AK091611 AX747094 BC042201 BC038856 BC004500	-23835	+	TSC_hg19_v1_chr9_+_95821007 CU677063 DQ894024 EU176188 AY358190	-61291	+	BT007164 CU690562 U72661 U91512 BC019336 BC004440 BC000298 TSC_hg19_v1_chr9_-_95896534 BC048212 NM_004148	14227	-	AJ242724 NM_006648 AB051547 AB463351	64917	+	NM_001098808 TSC_hg19_v1_chr9_-_96108726	226395	-	BC091476|C9orf89|84270|chromosome 9 open reading frame 89##NM_032310|C9orf89|84270|chromosome 9 open reading frame 89##AK057716|C9orf89|84270|chromosome 9 open reading frame 89##AK091611|C9orf89|84270|chromosome 9 open reading frame 89##BC042201|C9orf89|84270|chromosome 9 open reading frame 89##BC038856|C9orf89|84270|chromosome 9 open reading frame 89##BC004500|C9orf89|84270|chromosome 9 open reading frame 89##DQ894024|SUSD3|203328|sushi domain containing 3##EU176188|SUSD3|203328|sushi domain containing 3##AY358190|SUSD3|203328|sushi domain containing 3##BT007164|NINJ1|4814|ninjurin 1##U72661|NINJ1|4814|ninjurin 1##U91512|NINJ1|4814|ninjurin 1##BC019336|NINJ1|4814|ninjurin 1##BC004440|NINJ1|4814|ninjurin 1##BC000298|NINJ1|4814|ninjurin 1##BC048212|NINJ1|4814|ninjurin 1##NM_004148|NINJ1|4814|ninjurin 1##AJ242724|WNK2|65268|WNK lysine deficient protein kinase 2##NM_006648|WNK2|65268|WNK lysine deficient protein kinase 2##AB051547|WNK2|65268|WNK lysine deficient protein kinase 2##NM_001098808|C9orf129|445577|chromosome 9 open reading frame 129	0.0	
chr1	3341297	3341373	reg1004352.p1	5.579	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	-355559	+	NM_080431 AK058153 AK314500 BC029499	-403280	+	NM_001242672	-635106	-	TSC_hg19_v1_chr1_+_3371228 NM_014448 AK095984	29870	+	AK310408 TSC_hg19_v1_chr1_+_3388187 AK296150	46849	+	TSC_hg19_v1_chr1_-_3447976 AB011539	106657	-	NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16##NM_080431|ACTRT2|140625|actin-related protein T2##AK058153|ACTRT2|140625|actin-related protein T2##AK314500|ACTRT2|140625|actin-related protein T2##BC029499|ACTRT2|140625|actin-related protein T2##NM_001242672|TTC34|100287898|tetratricopeptide repeat domain 34##NM_014448|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK095984|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK310408|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK296150|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AB011539|MEGF6|1953|multiple EGF-like-domains 6	1.008763	
chr1	35057945	35058065	reg1024365.p1	5.579	+	NM_001134734	-415453	+	AK123355 NM_032884 BC007637	-425406	+	AY210418 NM_052896	-426563	-	AK129509 BC004379 NM_005268	162678	+	AK057628 NM_153212	167336	+	AK026139 NM_024009 TSC_hg19_v1_chr1_+_35246807	188801	+	NM_001134734|C1orf94|84970|chromosome 1 open reading frame 94##AK123355|C1orf94|84970|chromosome 1 open reading frame 94##NM_032884|C1orf94|84970|chromosome 1 open reading frame 94##BC007637|C1orf94|84970|chromosome 1 open reading frame 94##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2##AK129509|GJB5|2709|gap junction protein, beta 5, 31.1kDa##BC004379|GJB5|2709|gap junction protein, beta 5, 31.1kDa##NM_005268|GJB5|2709|gap junction protein, beta 5, 31.1kDa##AK057628|GJB4|127534|gap junction protein, beta 4, 30.3kDa##NM_153212|GJB4|127534|gap junction protein, beta 4, 30.3kDa##AK026139|GJB3|2707|gap junction protein, beta 3, 31kDa##NM_024009|GJB3|2707|gap junction protein, beta 3, 31kDa	0.031451	
chr1	95582355	95582509	reg1027358.p2	5.579	+	BC108263 NM_001199679	-24360	+	TSC_hg19_v1_chr1_-_95538474 BC011706 AK289395 NM_144988	-43946	-	TSC_hg19_v1_chr1_-_95392690 S80562 BC025372 AK312370 AK298145 NM_001839	-189792	-	TSC_hg19_v1_chr1_+_95582939 NM_152487 AK056404 BC137457 BC137458 BC139737	528	+	BC063464 NM_001199691	1046	+	TSC_hg19_v1_chr1_-_95699509 AK090700	117090	-	BC108263|TMEM56|148534|transmembrane protein 56##NM_001199679|TMEM56|148534|transmembrane protein 56##BC011706|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##AK289395|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##NM_144988|ALG14|199857|asparagine-linked glycosylation 14 homolog (S. cerevisiae)##S80562|CNN3|1266|calponin 3, acidic##BC025372|CNN3|1266|calponin 3, acidic##AK312370|CNN3|1266|calponin 3, acidic##AK298145|CNN3|1266|calponin 3, acidic##NM_001839|CNN3|1266|calponin 3, acidic##NM_152487|TMEM56|148534|transmembrane protein 56##AK056404|TMEM56|148534|transmembrane protein 56##BC137457|TMEM56|148534|transmembrane protein 56##BC137458|TMEM56|148534|transmembrane protein 56##BC139737|TMEM56|148534|transmembrane protein 56##BC063464|TMEM56-RWDD3|100527978|TMEM56-RWDD3 readthrough##NM_001199691|TMEM56-RWDD3|100527978|TMEM56-RWDD3 readthrough	0.0	
chr5	6781014	6781168	reg1026796.p1	5.579	+	AK308405 NM_001171806 AK303516	-34969	+	NM_001171805 NM_006999 AF089896 BC084567	-66341	+	M32313 TSC_hg19_v1_chr5_+_6633683 BT006834 CU679027 DQ891537 DQ894726	-147417	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	615177	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	1070168	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	1088041	-	AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##M32313|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##BT006834|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##DQ891537|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##DQ894726|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)##NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3	0.862914	CTCF.p2:2:0.863
chr6	12008825	12009002	reg1023017.p1	5.579	+	NM_001143948 NM_032744	-229634	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-470415	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-626373	-	NM_002114	3810	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	281680	+	TSC_hg19_v1_chr6_+_12514301 D28417	505389	+	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr11	1661438	1661587	reg1023202.p2	5.578	+	AB126074 AJ628247 NM_001001480	-10494	+	AB528165 AB126073 NM_001012709	-18167	-	AY597812 AB528164 AB126072 NM_001012708	-31859	-	AB126075 NM_001012416 BC130399 BC133035	56926	+	TSC_hg19_v1_chr11_-_1769086 AK289574	107628	-	NM_001170820 TSC_hg19_v1_chr11_-_1771824	110312	-	AB126074|KRTAP5-5|439915|keratin associated protein 5-5##AJ628247|KRTAP5-5|439915|keratin associated protein 5-5##NM_001001480|KRTAP5-5|439915|keratin associated protein 5-5##AB126073|KRTAP5-4|387267|keratin associated protein 5-4##NM_001012709|KRTAP5-4|387267|keratin associated protein 5-4##AY597812|KRTAP5-3|387266|keratin associated protein 5-3##AB126072|KRTAP5-3|387266|keratin associated protein 5-3##NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3##AB126075|KRTAP5-6|440023|keratin associated protein 5-6##NM_001012416|KRTAP5-6|440023|keratin associated protein 5-6##BC130399|KRTAP5-6|440023|keratin associated protein 5-6##BC133035|KRTAP5-6|440023|keratin associated protein 5-6##AK289574|IFITM10|402778|interferon induced transmembrane protein 10##NM_001170820|IFITM10|402778|interferon induced transmembrane protein 10	0.997115	CTCF.p2:5:0.997
chr4	190123556	190123688	reg1022870.p2	5.578	+	AK093499 AX748169 NM_178556 BC113860 BC114469	-1063002	+	BC111959 BC111961 BC143709 AK098667 NM_173553	-1097218	-	AK056719 AY429593 NM_174900	-1206698	+	L76159 NM_004477 AK291890 BC053997 TSC_hg19_v1_chr4_+_190862026	738385	+	TSC_hg19_v1_chr4_+_190862048 CU691066	738483	+	BC144572 AY714545 NM_001005217 NM_001199232	824781	-	AK093499|TRIML1|339976|tripartite motif family-like 1##NM_178556|TRIML1|339976|tripartite motif family-like 1##BC113860|TRIML1|339976|tripartite motif family-like 1##BC114469|TRIML1|339976|tripartite motif family-like 1##BC111959|TRIML2|205860|tripartite motif family-like 2##BC111961|TRIML2|205860|tripartite motif family-like 2##BC143709|TRIML2|205860|tripartite motif family-like 2##AK098667|TRIML2|205860|tripartite motif family-like 2##NM_173553|TRIML2|205860|tripartite motif family-like 2##AK056719|ZFP42|132625|zinc finger protein 42 homolog (mouse)##AY429593|ZFP42|132625|zinc finger protein 42 homolog (mouse)##NM_174900|ZFP42|132625|zinc finger protein 42 homolog (mouse)##L76159|FRG1|2483|FSHD region gene 1##NM_004477|FRG1|2483|FSHD region gene 1##AK291890|FRG1|2483|FSHD region gene 1##BC053997|FRG1|2483|FSHD region gene 1##BC144572|FRG2|448831|FSHD region gene 2##AY714545|FRG2|448831|FSHD region gene 2##NM_001005217|FRG2|448831|FSHD region gene 2##NM_001199232|LOC100288255|100288255|FSHD region gene 2-like	0.022397	
chr8	65176890	65177027	reg1025086.p2	5.578	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-1095758	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-1095814	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-1178331	-	NM_152414 AK293979	315900	+	TSC_hg19_v1_chr8_+_65493611 AK091333	316706	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	534321	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.822217	CTCF.p2:-10:0.822
chr15	80912213	80912324	reg1025388.p2	5.577	+	AK295763 TSC_hg19_v1_chr15_+_80733623	-178663	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	-215534	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-466892	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	75394	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	75741	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	159453	+	AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199	0.31535	CTCF.p2:-18:0.315
chr2	37763416	37763550	reg1021716.p1	5.577	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-191670	+	BC030706 BC012820 AB015982 NM_005813	-219290	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-304637	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	135296	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	135906	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	388949	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.997796	CTCF.p2:37:0.998
chr4	148978172	148978308	reg1027988.p1	5.577	+	AB050785 BC128055 NM_024605 BC126899 BC109029 BC109030	-324783	+	TSC_hg19_v1_chr4_+_148653238 AK123785	-324989	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	-372976	-	TSC_hg19_v1_chr4_-_149357955 AB587357	379742	-	TSC_hg19_v1_chr4_-_149363305 BC111758	385099	-	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	385344	-	AB050785|ARHGAP10|79658|Rho GTPase activating protein 10##BC128055|ARHGAP10|79658|Rho GTPase activating protein 10##NM_024605|ARHGAP10|79658|Rho GTPase activating protein 10##BC126899|ARHGAP10|79658|Rho GTPase activating protein 10##BC109029|ARHGAP10|79658|Rho GTPase activating protein 10##BC109030|ARHGAP10|79658|Rho GTPase activating protein 10##AK123785|ARHGAP10|79658|Rho GTPase activating protein 10##BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	0.581726	CTCF.p2:0:0.582
chr9	131182560	131182699	reg1026632.p1	5.577	+	TSC_hg19_v1_chr9_+_131133650 BC003581 AK001880 AK097029 AK300877 BC011620	-48973	+	NM_001135947 NM_030914 TSC_hg19_v1_chr9_+_131133630	-49015	+	BC009959 TSC_hg19_v1_chr9_+_131102955 AK314681	-79662	+	TSC_hg19_v1_chr9_+_131182704 NM_016174	95	+	AK297929 TSC_hg19_v1_chr9_+_131183135 BC108698 BC098432	541	+	TSC_hg19_v1_chr9_+_131183225 BC119698 BC119699	626	+	BC003581|URM1|81605|ubiquitin related modifier 1##AK001880|URM1|81605|ubiquitin related modifier 1##AK097029|URM1|81605|ubiquitin related modifier 1##AK300877|URM1|81605|ubiquitin related modifier 1##BC011620|URM1|81605|ubiquitin related modifier 1##NM_001135947|URM1|81605|ubiquitin related modifier 1##NM_030914|URM1|81605|ubiquitin related modifier 1##BC009959|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##AK314681|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##NM_016174|CERCAM|51148|cerebral endothelial cell adhesion molecule##AK297929|CERCAM|51148|cerebral endothelial cell adhesion molecule##BC108698|CERCAM|51148|cerebral endothelial cell adhesion molecule##BC098432|CERCAM|51148|cerebral endothelial cell adhesion molecule##BC119698|CERCAM|51148|cerebral endothelial cell adhesion molecule##BC119699|CERCAM|51148|cerebral endothelial cell adhesion molecule	1.024034	CTCF.p2:15:0.994
chr6	88541938	88542118	reg1008736.p2	5.576	+	AK001204 NM_018064 TSC_hg19_v1_chr6_-_88411988	-130040	-	TSC_hg19_v1_chr6_-_88411949 AK222701	-130080	-	TSC_hg19_v1_chr6_-_88411885 BC000764 BC003042	-130119	-	BC029488 NM_030960 AF203447	215502	+	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	313008	-	NM_001160226 NM_001160258 NM_001160259 NM_016083	333738	-	AK001204|AKIRIN2|55122|akirin 2##NM_018064|AKIRIN2|55122|akirin 2##AK222701|AKIRIN2|55122|akirin 2##BC000764|AKIRIN2|55122|akirin 2##BC003042|AKIRIN2|55122|akirin 2##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)	0.0	
chr1	182568640	182568744	reg1024182.p1	5.575	+	AK315231 BC090934 TSC_hg19_v1_chr1_-_182558392 CR627369 NM_021133	-10309	-	NM_001137669 AK302768 BC142944 AL136902	-149419	+	AJ515384 NM_172000	-198942	-	CU675308 TSC_hg19_v1_chr1_+_182569465	754	+	AF493937 BT006638 CU675307 AB528682 U94829 U70426 BC006243 TSC_hg19_v1_chr1_-_182573525 AK301261 AK311880 NM_002928	4778	-	BC069677 BC069718 BC103865 BC103866 BC103867 AF297015 NM_001102450 NM_033345	73349	-	AK315231|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##BC090934|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##CR627369|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##NM_021133|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##NM_001137669|RGSL1|353299|regulator of G-protein signaling like 1##AK302768|RGSL1|353299|regulator of G-protein signaling like 1##BC142944|RGSL1|353299|regulator of G-protein signaling like 1##AL136902|RGSL1|353299|regulator of G-protein signaling like 1##AJ515384|TEDDM1|127670|transmembrane epididymal protein 1##NM_172000|TEDDM1|127670|transmembrane epididymal protein 1##AF493937|RGS16|6004|regulator of G-protein signaling 16##BT006638|RGS16|6004|regulator of G-protein signaling 16##U94829|RGS16|6004|regulator of G-protein signaling 16##U70426|RGS16|6004|regulator of G-protein signaling 16##BC006243|RGS16|6004|regulator of G-protein signaling 16##AK301261|RGS16|6004|regulator of G-protein signaling 16##AK311880|RGS16|6004|regulator of G-protein signaling 16##NM_002928|RGS16|6004|regulator of G-protein signaling 16##BC069677|RGS8|85397|regulator of G-protein signaling 8##BC069718|RGS8|85397|regulator of G-protein signaling 8##BC103865|RGS8|85397|regulator of G-protein signaling 8##BC103866|RGS8|85397|regulator of G-protein signaling 8##BC103867|RGS8|85397|regulator of G-protein signaling 8##AF297015|RGS8|85397|regulator of G-protein signaling 8##NM_001102450|RGS8|85397|regulator of G-protein signaling 8##NM_033345|RGS8|85397|regulator of G-protein signaling 8	0.088467	
chr13	54879663	54879758	reg1025890.p2	5.575	+	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	-1276798	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	-1456935	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-1565748	-	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	2835406	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	2841976	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	2848549	+	AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	0.869245	CTCF.p2:2:0.869
chr1	714203	714379	reg1025291.p2	5.575	+	TSC_hg19_v1_chr1_-_714015 BC006361	-274	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	-92249	-	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-346643	+	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	48604	-	BC042880 TSC_hg19_v1_chr1_+_763038	48722	+	TSC_hg19_v1_chr1_+_763052 AK311121 AK311732 AK026873 BC102012 BC102023 BC107481	48779	+	BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115##BC042880|LOC643837|643837|uncharacterized LOC643837##AK311732|LOC643837|643837|uncharacterized LOC643837##AK026873|LOC643837|643837|uncharacterized LOC643837##BC102012|LOC643837|643837|uncharacterized LOC643837##BC102023|LOC643837|643837|uncharacterized LOC643837##BC107481|LOC643837|643837|uncharacterized LOC643837	0.161126	
chr3	143023693	143023794	reg1024727.p1	5.575	+	BC067737 TSC_hg19_v1_chr3_+_142895211	-128572	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-185092	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-303313	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	543524	-	NM_173552 AK315082	666909	+	TSC_hg19_v1_chr3_+_143690915 BC037293	667247	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58	0.347541	CTCF.p2:22:0.348
chr5	172614559	172614703	reg1024440.p2	5.575	+	NM_001205 NM_013978 NM_013979 NM_013980 BC010959 TSC_hg19_v1_chr5_+_172571536 AF083957 AF083958 U15172 AB527856 CU679862 AF083956 AY216799	-43135	+	TSC_hg19_v1_chr5_+_172484383 AK297424	-130248	+	TSC_hg19_v1_chr5_+_172483354 BX647768 NM_001168393 NM_001168394 NM_153607 AK300043 AY139008 BC041709 AY174896 AK124117 BX647573 AK291677	-131247	+	AB021133 CU693024 AB464641 DQ893313 DQ894104 DQ896627 BC025711 AK290615 AK307249 AK297844 AK307218 AK309495 U34962 AK307247 NM_001166175 NM_001166176 NM_004387	47568	-	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	140631	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	140812	-	NM_001205|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013978|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013979|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013980|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##BC010959|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083957|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083958|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##U15172|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083956|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AY216799|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AK297424|C5orf41|153222|chromosome 5 open reading frame 41##BX647768|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41##NM_153607|C5orf41|153222|chromosome 5 open reading frame 41##AK300043|C5orf41|153222|chromosome 5 open reading frame 41##AY139008|C5orf41|153222|chromosome 5 open reading frame 41##BC041709|C5orf41|153222|chromosome 5 open reading frame 41##AY174896|C5orf41|153222|chromosome 5 open reading frame 41##AK124117|C5orf41|153222|chromosome 5 open reading frame 41##BX647573|C5orf41|153222|chromosome 5 open reading frame 41##AK291677|C5orf41|153222|chromosome 5 open reading frame 41##AB021133|NKX2-5|1482|NK2 homeobox 5##DQ893313|NKX2-5|1482|NK2 homeobox 5##DQ894104|NKX2-5|1482|NK2 homeobox 5##DQ896627|NKX2-5|1482|NK2 homeobox 5##BC025711|NKX2-5|1482|NK2 homeobox 5##AK290615|NKX2-5|1482|NK2 homeobox 5##AK307249|NKX2-5|1482|NK2 homeobox 5##AK297844|NKX2-5|1482|NK2 homeobox 5##AK307218|NKX2-5|1482|NK2 homeobox 5##AK309495|NKX2-5|1482|NK2 homeobox 5##U34962|NKX2-5|1482|NK2 homeobox 5##AK307247|NKX2-5|1482|NK2 homeobox 5##NM_001166175|NKX2-5|1482|NK2 homeobox 5##NM_001166176|NKX2-5|1482|NK2 homeobox 5##NM_004387|NKX2-5|1482|NK2 homeobox 5##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2	0.993008	CTCF.p2:46:0.993
chr1	208827699	208827834	reg1024672.p1	5.574	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-410117	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-743209	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-743383	-	AK091113 AX746785 NM_001104548	774399	+	NM_020439 AK095713 AK289675 AF428261 BC032787	929294	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	996913	-	NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3	0.349317	CTCF.p2:-6:0.349
chr1	247070924	247071055	reg1026775.p2	5.574	+	TSC_hg19_v1_chr1_-_247054277 AL833491	-16694	-	TSC_hg19_v1_chr1_+_246887713 AK075178 BC026185 CU693152 AF151807	-183332	+	NM_016002	-183612	+	AK057394 AY157619 AB059277 NM_015446	23703	-	BC023527 AF242519 TSC_hg19_v1_chr1_-_247171319	100323	-	TSC_hg19_v1_chr1_-_247171329 BC041082 AX721130	100342	-	AL833491|AHCTF1|25909|AT hook containing transcription factor 1##AK075178|SCCPDH|51097|saccharopine dehydrogenase (putative)##BC026185|SCCPDH|51097|saccharopine dehydrogenase (putative)##AF151807|SCCPDH|51097|saccharopine dehydrogenase (putative)##NM_016002|SCCPDH|51097|saccharopine dehydrogenase (putative)##AK057394|AHCTF1P1|285116|AT hook containing transcription factor 1 pseudogene 1##AY157619|AHCTF1|25909|AT hook containing transcription factor 1##AB059277|AHCTF1|25909|AT hook containing transcription factor 1##NM_015446|AHCTF1|25909|AT hook containing transcription factor 1##BC023527|ZNF695|57116|zinc finger protein 695##BC041082|ZNF695|57116|zinc finger protein 695	0.0	
chr16	84627863	84628043	reg1023130.p1	5.574	+	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	-89662	-	TSC_hg19_v1_chr16_+_84402143 AK300526 AY791884 BX648333 NM_014861 AK316128 CR749829	-225811	+	AF302109 NM_021197 AF169631 TSC_hg19_v1_chr16_+_84328440 AK075061 BC029159 DQ893365 DQ896682	-299465	+	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	23623	-	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	23707	-	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	54181	+	BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##AK300526|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AY791884|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BX648333|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##NM_014861|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AK316128|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##CR749829|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AF302109|WFDC1|58189|WAP four-disulfide core domain 1##NM_021197|WFDC1|58189|WAP four-disulfide core domain 1##AF169631|WFDC1|58189|WAP four-disulfide core domain 1##AK075061|WFDC1|58189|WAP four-disulfide core domain 1##BC029159|WFDC1|58189|WAP four-disulfide core domain 1##DQ893365|WFDC1|58189|WAP four-disulfide core domain 1##DQ896682|WFDC1|58189|WAP four-disulfide core domain 1##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)	0.0	
chr17	35969600	35969749	reg1025566.p2	5.574	+	TSC_hg19_v1_chr17_-_35969418 AB462949 BC117313 BC143452 BC143476 BC143478 BC084536 BC090930 AF169548 AK302821 NM_001163544 NM_001163545 NM_001163546 NM_001163547 NM_007247 NM_080550 NM_198882	-224	-	TSC_hg19_v1_chr17_+_35849998 BC001894 AF038844 BC000370 BC004448	-119659	+	TSC_hg19_v1_chr17_+_35849996 AK314894	-119685	+	TSC_hg19_v1_chr17_-_36003446 BC006489 AB208938 CU692030	33767	-	TSC_hg19_v1_chr17_-_36003470 AF077033 AK001652 AK093661 AX748248 BC041785 NM_007010	33803	-	AB528419 BT007126 CR536572 DQ891528 EU176615 TSC_hg19_v1_chr17_-_36104898	135212	-	BC117313|SYNRG|11276|synergin, gamma##BC143452|SYNRG|11276|synergin, gamma##BC143476|SYNRG|11276|synergin, gamma##BC143478|SYNRG|11276|synergin, gamma##BC084536|SYNRG|11276|synergin, gamma##BC090930|SYNRG|11276|synergin, gamma##AF169548|SYNRG|11276|synergin, gamma##AK302821|SYNRG|11276|synergin, gamma##NM_001163544|SYNRG|11276|synergin, gamma##NM_001163545|SYNRG|11276|synergin, gamma##NM_001163546|SYNRG|11276|synergin, gamma##NM_001163547|SYNRG|11276|synergin, gamma##NM_007247|SYNRG|11276|synergin, gamma##NM_080550|SYNRG|11276|synergin, gamma##NM_198882|SYNRG|11276|synergin, gamma##BC001894|DUSP14|11072|dual specificity phosphatase 14##AF038844|DUSP14|11072|dual specificity phosphatase 14##BC000370|DUSP14|11072|dual specificity phosphatase 14##BC004448|DUSP14|11072|dual specificity phosphatase 14##AK314894|DUSP14|11072|dual specificity phosphatase 14##BC006489|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AB208938|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AF077033|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK001652|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK093661|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC041785|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_007010|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BT007126|HNF1B|6928|HNF1 homeobox B##CR536572|HNF1B|6928|HNF1 homeobox B##DQ891528|HNF1B|6928|HNF1 homeobox B##EU176615|HNF1B|6928|HNF1 homeobox B	0.0	
chr2	71297547	71297688	reg1028665.p1	5.574	+	TSC_hg19_v1_chr2_+_71295777 BC001029 BC005371 AK001812 AK097223 AK222645 BC036843 AJ242910 AB463914 CU674506 CU675147 DQ892674 DQ895916 CR457271	-1868	+	TSC_hg19_v1_chr2_+_71295436 AK297224	-2175	+	NM_017567 TSC_hg19_v1_chr2_+_71295427	-2200	+	DQ891375 DQ894553 TSC_hg19_v1_chr2_-_71357360 BC020825 AF364547 NM_032601	59762	-	TSC_hg19_v1_chr2_+_71357454 AK056862 NM_005791 BC126389	59872	+	TSC_hg19_v1_chr2_+_71357768 AK310931 BC041084 X98494	60168	+	BC001029|NAGK|55577|N-acetylglucosamine kinase##BC005371|NAGK|55577|N-acetylglucosamine kinase##AK001812|NAGK|55577|N-acetylglucosamine kinase##AK097223|NAGK|55577|N-acetylglucosamine kinase##AK222645|NAGK|55577|N-acetylglucosamine kinase##BC036843|NAGK|55577|N-acetylglucosamine kinase##AJ242910|NAGK|55577|N-acetylglucosamine kinase##DQ892674|NAGK|55577|N-acetylglucosamine kinase##DQ895916|NAGK|55577|N-acetylglucosamine kinase##CR457271|NAGK|55577|N-acetylglucosamine kinase##AK297224|NAGK|55577|N-acetylglucosamine kinase##NM_017567|NAGK|55577|N-acetylglucosamine kinase##DQ891375|MCEE|84693|methylmalonyl CoA epimerase##DQ894553|MCEE|84693|methylmalonyl CoA epimerase##BC020825|MCEE|84693|methylmalonyl CoA epimerase##AF364547|MCEE|84693|methylmalonyl CoA epimerase##NM_032601|MCEE|84693|methylmalonyl CoA epimerase##AK056862|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##NM_005791|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC126389|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##AK310931|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC041084|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##X98494|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)	0.568657	CTCF.p2:1:0.569
chr5	142388589	142388770	reg1024599.p1	5.574	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-238371	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-238707	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-311108	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	394144	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	394427	-	BC015610 TSC_hg19_v1_chr5_-_142783214	394532	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.040086	
chr5	142784890	142785053	reg1010376.p5	5.574	+	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-805	-	TSC_hg19_v1_chr5_-_142784036 AK302050 NM_001018076	-939	-	TSC_hg19_v1_chr5_-_142783310 AJ888004	-1604	-	NM_001018074 NM_001018075 NM_001018077	30105	-	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	406787	+	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	765164	-	BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ888004|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5	0.0	
chr15	74696750	74696895	reg1021583.p2	5.573	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-36819	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-38287	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-85917	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	29207	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	29490	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	56625	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.0	
chr3	62037398	62037511	reg1026521.p2	5.573	+	AB055764 TSC_hg19_v1_chr3_-_61728812	-308643	-	L09247 AB385117 TSC_hg19_v1_chr3_+_61548071	-489478	+	BC047734 TSC_hg19_v1_chr3_+_61547294	-490168	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	267252	+	BC017772 NM_020685	267941	+	AK290464 NM_018008	321735	-	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2	0.785894	CTCF.p2:9:0.786
chr3	12864632	12864738	reg1023707.p2	5.572	+	GU727621 NM_001162499 NM_012298 BC136592 AB014567	-26479	+	AK001898 BC020658 AK092470 AX747561 NM_018306	-63912	-	TSC_hg19_v1_chr3_-_12705626 NM_002880	-159011	-	NM_001007074	17263	-	BC011514 BC070209 X03342 D28385 AK311909 TSC_hg19_v1_chr3_-_12883042 NM_000994 NM_001007073	18358	-	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	76923	-	GU727621|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_001162499|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_012298|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##BC136592|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##AB014567|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##AK001898|TMEM40|55287|transmembrane protein 40##BC020658|TMEM40|55287|transmembrane protein 40##AK092470|TMEM40|55287|transmembrane protein 40##NM_018306|TMEM40|55287|transmembrane protein 40##NM_002880|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##NM_001007074|RPL32|6161|ribosomal protein L32##BC011514|RPL32|6161|ribosomal protein L32##BC070209|RPL32|6161|ribosomal protein L32##X03342|RPL32|6161|ribosomal protein L32##D28385|RPL32|6161|ribosomal protein L32##AK311909|RPL32|6161|ribosomal protein L32##NM_000994|RPL32|6161|ribosomal protein L32##NM_001007073|RPL32|6161|ribosomal protein L32##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1	0.066399	
chr4	111891966	111892065	reg1024779.p1	5.572	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-328737	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-333846	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-347740	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	1174599	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	1261069	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	1314986	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.158986	
chr11	75087400	75087518	reg1026755.p1	5.571	+	AF084040 AF084940 FJ348262 CU678548 AB462955 TSC_hg19_v1_chr11_-_75062708 AK289718 BC003636 NM_004041 NM_020251	-24643	-	NM_001195528	-135510	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	-216618	+	TSC_hg19_v1_chr11_+_75110562 D28344 AK130960 BC034149 NM_001005 AK129794 AK313051 BC013231 BC100284 X55715 BC071917 AK223048 BC003137 BC071669 S42658 AB464166 CU678394 DQ892888 DQ896136 U14990 U14991 U14992 BC003577 BC013196 AB062288	23116	+	HQ258227 BC132708 BC132710 TSC_hg19_v1_chr11_-_75141083 AK091109 AX746783	53601	-	TSC_hg19_v1_chr11_-_75141247 BC042952 BC057763	53772	-	AF084040|ARRB1|408|arrestin, beta 1##AF084940|ARRB1|408|arrestin, beta 1##FJ348262|ARRB1|408|arrestin, beta 1##AK289718|ARRB1|408|arrestin, beta 1##BC003636|ARRB1|408|arrestin, beta 1##NM_004041|ARRB1|408|arrestin, beta 1##NM_020251|ARRB1|408|arrestin, beta 1##NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##D28344|RPS3|6188|ribosomal protein S3##AK130960|RPS3|6188|ribosomal protein S3##BC034149|RPS3|6188|ribosomal protein S3##NM_001005|RPS3|6188|ribosomal protein S3##AK129794|RPS3|6188|ribosomal protein S3##AK313051|RPS3|6188|ribosomal protein S3##BC013231|RPS3|6188|ribosomal protein S3##BC100284|RPS3|6188|ribosomal protein S3##X55715|RPS3|6188|ribosomal protein S3##BC071917|RPS3|6188|ribosomal protein S3##AK223048|RPS3|6188|ribosomal protein S3##BC003137|RPS3|6188|ribosomal protein S3##BC071669|RPS3|6188|ribosomal protein S3##S42658|RPS3|6188|ribosomal protein S3##DQ892888|RPS3|6188|ribosomal protein S3##DQ896136|RPS3|6188|ribosomal protein S3##U14990|RPS3|6188|ribosomal protein S3##U14991|RPS3|6188|ribosomal protein S3##U14992|RPS3|6188|ribosomal protein S3##BC003577|RPS3|6188|ribosomal protein S3##BC013196|RPS3|6188|ribosomal protein S3##AB062288|RPS3|6188|ribosomal protein S3##HQ258227|KLHL35|283212|kelch-like 35 (Drosophila)##BC132708|KLHL35|283212|kelch-like 35 (Drosophila)##BC132710|KLHL35|283212|kelch-like 35 (Drosophila)##AK091109|KLHL35|283212|kelch-like 35 (Drosophila)##BC042952|KLHL35|283212|kelch-like 35 (Drosophila)##BC057763|KLHL35|283212|kelch-like 35 (Drosophila)	0.955221	CTCF.p2:-15:0.768
chr12	121063515	121063652	reg1020912.p1	5.571	+	AK223206 TSC_hg19_v1_chr12_-_121019185 AK303144 AF070660 AF117232 AJ306296 BC012505 NM_015918 NM_198202	-44395	-	AK094011 AK097807 TSC_hg19_v1_chr12_+_120972158 AK126274 AK301608 AB027196 BC016622 BC031596 BC101709 BC101715 BC143493 BT006974 CU677651 D87451 DQ890634 DQ893805	-91083	+	TSC_hg19_v1_chr12_+_120972153 NM_014868 AK315558	-91455	+	BC030201 NM_001033677	14838	+	AF169148 AF169149 NM_004276 NM_031205	24787	+	TSC_hg19_v1_chr12_+_121124951 NM_014730	61355	+	AK223206|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK303144|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF070660|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF117232|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AJ306296|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##BC012505|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015918|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_198202|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK094011|RNF10|9921|ring finger protein 10##AK097807|RNF10|9921|ring finger protein 10##AK126274|RNF10|9921|ring finger protein 10##AK301608|RNF10|9921|ring finger protein 10##AB027196|RNF10|9921|ring finger protein 10##BC016622|RNF10|9921|ring finger protein 10##BC031596|RNF10|9921|ring finger protein 10##BC101709|RNF10|9921|ring finger protein 10##BC101715|RNF10|9921|ring finger protein 10##BC143493|RNF10|9921|ring finger protein 10##BT006974|RNF10|9921|ring finger protein 10##D87451|RNF10|9921|ring finger protein 10##DQ890634|RNF10|9921|ring finger protein 10##DQ893805|RNF10|9921|ring finger protein 10##NM_014868|RNF10|9921|ring finger protein 10##AK315558|RNF10|9921|ring finger protein 10##BC030201|CABP1|9478|calcium binding protein 1##NM_001033677|CABP1|9478|calcium binding protein 1##AF169148|CABP1|9478|calcium binding protein 1##AF169149|CABP1|9478|calcium binding protein 1##NM_004276|CABP1|9478|calcium binding protein 1##NM_031205|CABP1|9478|calcium binding protein 1##NM_014730|MLEC|9761|malectin	0.806082	CTCF.p2:8:0.787
chr13	91520664	91520839	reg1024966.p2	5.571	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3195882	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5147312	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7064251	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	530153	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	2358676	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3611075	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.689331	CTCF.p2:-9:0.689
chr15	57210480	57210627	reg1020640.p1	5.570	+	TSC_hg19_v1_chr15_-_57025818 BX641000 BX640707 NM_001002843 NM_001002844 NM_017661 AK295159	-184721	-	TSC_hg19_v1_chr15_-_57025690 AB046804 BC053649 BC064359 AK310882 AK289739 BC130451 BC136412	-184841	-	TSC_hg19_v1_chr15_-_56757262 BC031046 AK310029 BC012554 BC034991 AK002084 NM_018365	-453267	-	TSC_hg19_v1_chr15_-_57210733 AK096657 BC036541	183	-	TSC_hg19_v1_chr15_+_57210823 NM_003205 NM_207036 NM_207037 NM_207038	274	+	TSC_hg19_v1_chr15_+_57210872 AL831981 AK294617 AK310708 AK312710	315	+	BX641000|ZNF280D|54816|zinc finger protein 280D##BX640707|ZNF280D|54816|zinc finger protein 280D##NM_001002843|ZNF280D|54816|zinc finger protein 280D##NM_001002844|ZNF280D|54816|zinc finger protein 280D##NM_017661|ZNF280D|54816|zinc finger protein 280D##AK295159|ZNF280D|54816|zinc finger protein 280D##AB046804|ZNF280D|54816|zinc finger protein 280D##BC053649|ZNF280D|54816|zinc finger protein 280D##BC064359|ZNF280D|54816|zinc finger protein 280D##AK310882|ZNF280D|54816|zinc finger protein 280D##AK289739|ZNF280D|54816|zinc finger protein 280D##BC130451|ZNF280D|54816|zinc finger protein 280D##BC136412|ZNF280D|54816|zinc finger protein 280D##BC031046|MNS1|55329|meiosis-specific nuclear structural 1##BC012554|MNS1|55329|meiosis-specific nuclear structural 1##BC034991|MNS1|55329|meiosis-specific nuclear structural 1##AK002084|MNS1|55329|meiosis-specific nuclear structural 1##NM_018365|MNS1|55329|meiosis-specific nuclear structural 1##AK096657|LOC145783|145783|uncharacterized LOC145783##NM_003205|TCF12|6938|transcription factor 12##NM_207036|TCF12|6938|transcription factor 12##NM_207037|TCF12|6938|transcription factor 12##NM_207038|TCF12|6938|transcription factor 12##AL831981|TCF12|6938|transcription factor 12##AK294617|TCF12|6938|transcription factor 12##AK310708|TCF12|6938|transcription factor 12##AK312710|TCF12|6938|transcription factor 12	0.0	
chr2	179343884	179344007	reg1025104.p1	5.570	+	AY353086 BT007122 CU679453 EU831809 EU831886 AY359015 TSC_hg19_v1_chr2_-_179343275 BC009711 AK292145 AK299215 NM_001135212 NM_181342	-656	-	DQ365827 NM_001042702	-27783	+	BT007243 CR533525 EU831635 EU831719 AB590648 CU679369 TSC_hg19_v1_chr2_-_179315881 AF072860 AF083033 AK223107 BC009470 AK296019 AL136615 AK290601 NM_003690	-28089	-	AK314459 NM_019091 TSC_hg19_v1_chr2_+_179345209	1258	+	TSC_hg19_v1_chr2_+_179345234 AK074209	1287	+	TSC_hg19_v1_chr2_+_179345280 AF286162 BC044567 EU832321 EU832406	1485	+	AY353086|FKBP7|51661|FK506 binding protein 7##BT007122|FKBP7|51661|FK506 binding protein 7##EU831809|FKBP7|51661|FK506 binding protein 7##EU831886|FKBP7|51661|FK506 binding protein 7##AY359015|FKBP7|51661|FK506 binding protein 7##BC009711|FKBP7|51661|FK506 binding protein 7##AK292145|FKBP7|51661|FK506 binding protein 7##AK299215|FKBP7|51661|FK506 binding protein 7##NM_001135212|FKBP7|51661|FK506 binding protein 7##NM_181342|FKBP7|51661|FK506 binding protein 7##DQ365827|DFNB59|494513|deafness, autosomal recessive 59##NM_001042702|DFNB59|494513|deafness, autosomal recessive 59##BT007243|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##CR533525|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##EU831635|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##EU831719|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AF072860|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AF083033|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK223107|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##BC009470|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK296019|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AL136615|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK290601|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_003690|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK314459|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##NM_019091|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##AK074209|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##AF286162|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##BC044567|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##EU832321|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##EU832406|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3	0.0	
chr2	225867523	225867647	reg1008423.p3	5.570	+	TSC_hg19_v1_chr2_-_225811768 EU236710	-55831	-	TSC_hg19_v1_chr2_-_225450116 NM_003590	-417465	-	TSC_hg19_v1_chr2_-_225450056 BC039598	-417510	-	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	39763	-	NM_020864 BC131727 AB040919	398060	+	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	1795894	-	EU236710|DOCK10|55619|dedicator of cytokinesis 10##NM_003590|CUL3|8452|cullin 3##BC039598|CUL3|8452|cullin 3##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1	0.72788	CTCF.p2:-7:0.728
chr5	113641421	113641524	reg1024678.p2	5.570	+	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	-792076	+	AK128596 NM_001085377	-816946	-	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	-870840	-	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	56577	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	56989	+	BC015371 NM_170775 BC040722	127777	+	AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2##AK128596|MCC|4163|mutated in colorectal cancers##NM_001085377|MCC|4163|mutated in colorectal cancers##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	0.734959	CTCF.p2:19:0.735
chr5	67730379	67730484	reg1020161.p2	5.570	+	AK094785 NM_001242466 AK294919	-141979	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-143885	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-146137	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	659372	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	659451	+	AK292925 TSC_hg19_v1_chr5_+_68389913	659482	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.0	
chr6	149347750	149347864	reg1026777.p1	5.570	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-279598	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-683616	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-683817	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	291296	+	AK315038 NM_015093 AK307650	291634	+	AY340238 NM_001002255 BC130305 HQ258040	373701	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.076491	
chr7	147939487	147939630	reg1027287.p1	5.570	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-2125674	+	NM_014141	-2126106	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-3406422	-	TSC_hg19_v1_chr7_+_148036552 CR933671	97007	+	BC021251 NM_145304	348098	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	456382	+	AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##CR933671|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1	0.956844	CTCF.p2:-6:0.957
chr8	19670927	19671068	reg1028889.p1	5.570	+	AK314625 TSC_hg19_v1_chr8_-_19615422	-55580	-	AY358441 NM_018371	-130904	-	BX649103 NM_001130518	-210967	-	TSC_hg19_v1_chr8_+_19674936 NM_018142	3924	+	TSC_hg19_v1_chr8_+_19674972 AK001431 AB590485	4006	+	NM_000237 S78266 TSC_hg19_v1_chr8_+_19796721	125655	+	AK314625|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AY358441|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018371|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##BX649103|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_001130518|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018142|INTS10|55174|integrator complex subunit 10##AK001431|INTS10|55174|integrator complex subunit 10##NM_000237|LPL|4023|lipoprotein lipase##S78266|LPL|4023|lipoprotein lipase	0.999186	CTCF.p2:-7:0.999
chr8	95625229	95625359	reg1026571.p1	5.570	+	AB037850 AF116724 HQ258534 TSC_hg19_v1_chr8_-_95565696 AL832487 BC112288 BC113380 NM_015496 NM_183009	-59587	-	BC001965 AF112481 BC020668 AK290437 TSC_hg19_v1_chr8_-_95487344 NM_001205262 NM_012415	-137975	-	AF007866 NM_001205263	-176139	-	AK057998 TSC_hg19_v1_chr8_-_95651772	26440	-	TSC_hg19_v1_chr8_+_95653284 BX647570	27998	+	TSC_hg19_v1_chr8_+_95653392 NM_001034915 NM_001122825 NM_001122826 NM_001122827 NM_017697	28072	+	AB037850|KIAA1429|25962|KIAA1429##AF116724|KIAA1429|25962|KIAA1429##AL832487|KIAA1429|25962|KIAA1429##BC112288|KIAA1429|25962|KIAA1429##BC113380|KIAA1429|25962|KIAA1429##NM_015496|KIAA1429|25962|KIAA1429##NM_183009|KIAA1429|25962|KIAA1429##BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205262|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK057998|LOC100288748|100288748|uncharacterized LOC100288748##BX647570|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001034915|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122825|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122826|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122827|ESRP1|54845|epithelial splicing regulatory protein 1##NM_017697|ESRP1|54845|epithelial splicing regulatory protein 1	0.702583	CTCF.p2:-9:0.703
chr12	42982889	42983024	reg1019529.p1	5.569	+	TSC_hg19_v1_chr12_-_42877811 NM_001144882 NM_001144883	-105157	-	AK122881 TSC_hg19_v1_chr12_-_42877772	-105198	-	TSC_hg19_v1_chr12_-_42877418 AK122877 NM_001144881	-105540	-	BC114939 BC114940 AF399844 AF543759 AF543760 AK056499 TSC_hg19_v1_chr12_-_42983549 NM_153026	536	-	AF488804 AJ515153 AJ515154 NM_025003	962767	-	AL136759 TSC_hg19_v1_chr12_-_44152566 BX647494 NM_001098615 AK097331 AK225903 NM_001098614 BC020781 CR627435 BC068502 AK092030 AX747323 NM_031292	1169619	-	NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK122877|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##BC114939|PRICKLE1|144165|prickle homolog 1 (Drosophila)##BC114940|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF399844|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543759|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543760|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK056499|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_153026|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF488804|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AJ515153|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AJ515154|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##NM_025003|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AL136759|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BX647494|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098615|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK097331|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK225903|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098614|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC020781|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##CR627435|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC068502|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK092030|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_031292|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like	0.07927	
chr14	100542631	100542766	reg1022865.p2	5.569	+	TSC_hg19_v1_chr14_+_100531768 AF087843 BC032358 AF052504	-10903	+	TSC_hg19_v1_chr14_+_100531758 NM_016337 AK301379	-10946	+	AK295919 TSC_hg19_v1_chr14_+_100485800	-56939	+	AF131766 TSC_hg19_v1_chr14_+_100563847	21135	+	AY541700 BC063598 TSC_hg19_v1_chr14_-_100626009 NM_206918	83273	-	NM_003403 TSC_hg19_v1_chr14_+_100705177	162444	+	AF087843|EVL|51466|Enah/Vasp-like##BC032358|EVL|51466|Enah/Vasp-like##AF052504|EVL|51466|Enah/Vasp-like##NM_016337|EVL|51466|Enah/Vasp-like##AK301379|EVL|51466|Enah/Vasp-like##AK295919|EVL|51466|Enah/Vasp-like##AF131766|EVL|51466|Enah/Vasp-like##AY541700|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##BC063598|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##NM_206918|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##NM_003403|YY1|7528|YY1 transcription factor	0.964314	CTCF.p2:4:0.964
chr19	35953692	35953872	reg1020016.p2	5.569	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	-13165	+	AK290710 NM_005304 BC035657	-104288	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	-111332	+	AM392574 AM392667 AM392672 AM392738 AM392847 AM392851 AM393397 AM393477 AY359007 HQ258707 BC130501 NM_001244847 NM_207392	27606	-	AY622964 AY789707 AF086315 AL832080 NM_001035516	39023	-	AY789698 AY789699 AY789700 AY789701 AY789702 AY789703 AY789704 AY789705 AY789706 BC011886 TSC_hg19_v1_chr19_-_36001373 AK096215 AK304668 AK316475 EF158323 NM_001126059 EF158324 EF158325 EF158326	47591	-	AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2##AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##AM392574|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392667|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392672|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392738|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392847|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392851|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393397|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393477|KRTDAP|388533|keratinocyte differentiation-associated protein##AY359007|KRTDAP|388533|keratinocyte differentiation-associated protein##HQ258707|KRTDAP|388533|keratinocyte differentiation-associated protein##BC130501|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_001244847|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_207392|KRTDAP|388533|keratinocyte differentiation-associated protein##AY622964|DMKN|93099|dermokine##AY789707|DMKN|93099|dermokine##AF086315|DMKN|93099|dermokine##AL832080|DMKN|93099|dermokine##NM_001035516|DMKN|93099|dermokine##AY789698|DMKN|93099|dermokine##AY789699|DMKN|93099|dermokine##AY789700|DMKN|93099|dermokine##AY789701|DMKN|93099|dermokine##AY789702|DMKN|93099|dermokine##AY789703|DMKN|93099|dermokine##AY789704|DMKN|93099|dermokine##AY789705|DMKN|93099|dermokine##AY789706|DMKN|93099|dermokine##BC011886|DMKN|93099|dermokine##AK096215|DMKN|93099|dermokine##AK304668|DMKN|93099|dermokine##AK316475|DMKN|93099|dermokine##EF158323|DMKN|93099|dermokine##NM_001126059|DMKN|93099|dermokine##EF158324|DMKN|93099|dermokine##EF158325|DMKN|93099|dermokine##EF158326|DMKN|93099|dermokine	0.014616	
chr3	11025123	11025236	reg1022680.p1	5.569	+	TSC_hg19_v1_chr3_+_10857912 AK312719 BC036083 NM_014229 S75989 AB527355	-167272	+	L20977 TSC_hg19_v1_chr3_-_10749723	-275457	-	AB210008 TSC_hg19_v1_chr3_-_10547352	-477833	-	NM_003042 TSC_hg19_v1_chr3_+_11034421	9242	+	TSC_hg19_v1_chr3_+_11034439 BC057291 BC033904	9283	+	AK289412 NM_001098213	153599	+	AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##L20977|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC057291|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC033904|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##AK289412|HRH1|3269|histamine receptor H1##NM_001098213|HRH1|3269|histamine receptor H1	0.159053	
chr3	63214421	63214563	reg1026410.p1	5.569	+	AF458662 AB593079 TSC_hg19_v1_chr3_-_62861056 AB032947 NM_003716 NM_183393 NM_183394	-353448	-	TSC_hg19_v1_chr3_-_62860565 AB587314	-353860	-	AK290464 NM_018008	-855303	-	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	49425	+	NM_144642 AK315958 AK312465	214307	+	NM_001080537 AK126350	423866	+	AF458662|CADPS|8618|Ca++-dependent secretion activator##AB593079|CADPS|8618|Ca++-dependent secretion activator##AB032947|CADPS|8618|Ca++-dependent secretion activator##NM_003716|CADPS|8618|Ca++-dependent secretion activator##NM_183393|CADPS|8618|Ca++-dependent secretion activator##NM_183394|CADPS|8618|Ca++-dependent secretion activator##AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2##NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin##NM_144642|SYNPR|132204|synaptoporin##AK315958|SYNPR|132204|synaptoporin##AK312465|SYNPR|132204|synaptoporin##NM_001080537|SNTN|132203|sentan, cilia apical structure protein##AK126350|SNTN|132203|sentan, cilia apical structure protein	0.319755	CTCF.p2:-22:0.320
chr6_cox_hap2	3307400	3307523	reg1024573.p1	5.569	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.953188	CTCF.p2:30:0.953
chr11	94892062	94892163	reg1026187.p1	5.568	+	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-69100	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-91704	+	TSC_hg19_v1_chr11_+_94800329 BC057783 BC006181	-91768	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	72192	-	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	630539	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	630621	-	AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8##BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B	0.985211	CTCF.p2:-6:0.985
chr12	20799314	20799449	reg1025727.p2	5.568	+	AK308317 NM_001244683	-74584	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	-277183	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-1206193	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	49114	+	BC058006 BC105597 NM_019844 BC022843 AK055874 BC070264	164267	+	AF401642 NM_001009562	369248	+	AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC058006|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC105597|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_019844|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC022843|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##AK055874|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC070264|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##AF401642|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)##NM_001009562|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)	0.999228	CTCF.p2:-25:0.999
chr19	53030436	53030571	reg1024215.p1	5.568	+	AB091373 AB091374 AK299106 NM_001099694 TSC_hg19_v1_chr19_+_52956836 AL833487 AB091376 AB091375	-73676	+	AB086839 AB086840 AB091368 AB091369 NM_001143938 NM_001143939	-95837	+	AK056552 AL833325 NM_032423	-129393	+	CR749856 TSC_hg19_v1_chr19_+_53030941 NM_001039886	426	+	TSC_hg19_v1_chr19_+_53073539 NM_018260 AK001753 BC131719 BC136425 BC136426 BC054884 BC080612	43039	+	BC067346 NM_001172655	43413	+	AB091373|ZNF578|147660|zinc finger protein 578##AB091374|ZNF578|147660|zinc finger protein 578##AK299106|ZNF578|147660|zinc finger protein 578##NM_001099694|ZNF578|147660|zinc finger protein 578##AB091376|ZNF578|147660|zinc finger protein 578##AB091375|ZNF578|147660|zinc finger protein 578##AB086839|ZNF534|147658|zinc finger protein 534##AB086840|ZNF534|147658|zinc finger protein 534##NM_001143938|ZNF534|147658|zinc finger protein 534##NM_001143939|ZNF534|147658|zinc finger protein 534##AK056552|ZNF528|84436|zinc finger protein 528##AL833325|ZNF528|84436|zinc finger protein 528##NM_032423|ZNF528|84436|zinc finger protein 528##CR749856|ZNF808|388558|zinc finger protein 808##NM_001039886|ZNF808|388558|zinc finger protein 808##NM_018260|ZNF701|55762|zinc finger protein 701##AK001753|ZNF701|55762|zinc finger protein 701##BC131719|ZNF701|55762|zinc finger protein 701##BC136425|ZNF701|55762|zinc finger protein 701##BC136426|ZNF701|55762|zinc finger protein 701##BC054884|ZNF701|55762|zinc finger protein 701##BC080612|ZNF701|55762|zinc finger protein 701##BC067346|ZNF701|55762|zinc finger protein 701##NM_001172655|ZNF701|55762|zinc finger protein 701	0.052424	
chr2	119976482	119976583	reg1024630.p1	5.568	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	-60128	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	-276712	+	NM_001426	-370774	-	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	4853	+	TSC_hg19_v1_chr2_+_119981409 AF423424 AK001691 AY029585 AY214461 BX538047 AK291608 AF238864 AF262322 AY082673 BC095421 BC042150	4895	+	BC126395 BC126397 BC144012 BC144014 BC171737 NM_001017927 TSC_hg19_v1_chr2_-_120124372 BC047365 BC105805	147806	-	AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##NM_001426|EN1|2019|engrailed homeobox 1##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase##AF423424|STEAP3|55240|STEAP family member 3, metalloreductase##AK001691|STEAP3|55240|STEAP family member 3, metalloreductase##AY029585|STEAP3|55240|STEAP family member 3, metalloreductase##AY214461|STEAP3|55240|STEAP family member 3, metalloreductase##BX538047|STEAP3|55240|STEAP family member 3, metalloreductase##AK291608|STEAP3|55240|STEAP family member 3, metalloreductase##AF238864|STEAP3|55240|STEAP family member 3, metalloreductase##AF262322|STEAP3|55240|STEAP family member 3, metalloreductase##AY082673|STEAP3|55240|STEAP family member 3, metalloreductase##BC095421|STEAP3|55240|STEAP family member 3, metalloreductase##BC042150|STEAP3|55240|STEAP family member 3, metalloreductase##BC126395|C2orf76|130355|chromosome 2 open reading frame 76##BC126397|C2orf76|130355|chromosome 2 open reading frame 76##BC144012|C2orf76|130355|chromosome 2 open reading frame 76##BC144014|C2orf76|130355|chromosome 2 open reading frame 76##BC171737|C2orf76|130355|chromosome 2 open reading frame 76##NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76##BC047365|C2orf76|130355|chromosome 2 open reading frame 76##BC105805|C2orf76|130355|chromosome 2 open reading frame 76	0.0	
chr3	100612562	100612668	reg1024887.p1	5.568	+	TSC_hg19_v1_chr3_+_100428396 BC041600 BC023599	-184151	+	TSC_hg19_v1_chr3_+_100428385 BC001483 NM_001195478	-184242	+	NM_001007565 NM_001195479 NM_006070 TSC_hg19_v1_chr3_+_100428337 AK093456 BC009241	-184370	+	CU688850 EU832117 EU832211 AK025204 AL833204 BC030221 TSC_hg19_v1_chr3_-_100712327 NM_015429	99675	-	AF173155 AB593127 NM_016247 DQ980603 DQ980602	426807	-	AM392620 AM393440 TSC_hg19_v1_chr3_-_101232029 AK297356 BC129988 BC062674 BX537943 AL833577 AF199458 NM_001077203 NM_020654	619413	-	BC041600|TFG|10342|TRK-fused gene##BC023599|TFG|10342|TRK-fused gene##BC001483|TFG|10342|TRK-fused gene##NM_001195478|TFG|10342|TRK-fused gene##NM_001007565|TFG|10342|TRK-fused gene##NM_001195479|TFG|10342|TRK-fused gene##NM_006070|TFG|10342|TRK-fused gene##AK093456|TFG|10342|TRK-fused gene##BC009241|TFG|10342|TRK-fused gene##EU832117|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##EU832211|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AK025204|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AL833204|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##BC030221|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##NM_015429|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AB593127|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7##AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7##AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7##BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7##AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7##AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7	0.909647	CTCF.p2:12:0.910
chr4	17113998	17114122	reg1024334.p1	5.568	+	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	-213675	-	AK226029 TSC_hg19_v1_chr4_-_16900258	-213801	-	AK300119 AB463834 DQ891981 DQ895171 AK312881 TSC_hg19_v1_chr4_-_16900210 AF068651 AF047337 AF064492 AF064493 BC034019	-213934	-	AB528218 AM393718 DQ891926 DQ895113 CU674280 TSC_hg19_v1_chr4_-_17513714 X04882 BC000576 AK124382 AK296622 AK223437 AK289773 NM_000320	399706	-	BC127863 NM_001079827	402727	+	TSC_hg19_v1_chr4_+_17578852 NM_015907	464822	+	AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2##AK226029|LDB2|9079|LIM domain binding 2##AK300119|LDB2|9079|LIM domain binding 2##DQ891981|LDB2|9079|LIM domain binding 2##DQ895171|LDB2|9079|LIM domain binding 2##AK312881|LDB2|9079|LIM domain binding 2##AF068651|LDB2|9079|LIM domain binding 2##AF047337|LDB2|9079|LIM domain binding 2##AF064492|LDB2|9079|LIM domain binding 2##AF064493|LDB2|9079|LIM domain binding 2##BC034019|LDB2|9079|LIM domain binding 2##AM393718|QDPR|5860|quinoid dihydropteridine reductase##DQ891926|QDPR|5860|quinoid dihydropteridine reductase##DQ895113|QDPR|5860|quinoid dihydropteridine reductase##X04882|QDPR|5860|quinoid dihydropteridine reductase##BC000576|QDPR|5860|quinoid dihydropteridine reductase##AK124382|QDPR|5860|quinoid dihydropteridine reductase##AK296622|QDPR|5860|quinoid dihydropteridine reductase##AK223437|QDPR|5860|quinoid dihydropteridine reductase##AK289773|QDPR|5860|quinoid dihydropteridine reductase##NM_000320|QDPR|5860|quinoid dihydropteridine reductase##BC127863|CLRN2|645104|clarin 2##NM_001079827|CLRN2|645104|clarin 2##NM_015907|LAP3|51056|leucine aminopeptidase 3	0.989474	CTCF.p2:8:0.989
chr1	240312901	240313050	reg1030670.p1	5.567	+	TSC_hg19_v1_chr1_+_240255182 NM_020066	-57798	+	AF279779 NM_000740	-520603	+	TSC_hg19_v1_chr1_+_239550016 AK056349	-763033	+	BC046632 TSC_hg19_v1_chr1_-_240775431	462434	-	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	462479	-	AF090116 AK314862 TSC_hg19_v1_chr1_-_241520451	1207443	-	NM_020066|FMN2|56776|formin 2##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##BC046632|GREM2|64388|gremlin 2##AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2##AF090116|RGS7|6000|regulator of G-protein signaling 7##AK314862|RGS7|6000|regulator of G-protein signaling 7	0.999354	CTCF.p2:6:0.999
chr14	54167899	54168080	reg1025449.p1	5.567	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-547939	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-548021	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-548116	-	NM_130851	253280	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	255544	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	695732	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.0	
chr15	75388074	75388255	reg1026906.p2	5.567	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-72183	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-72236	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-100257	+	AK128205 TSC_hg19_v1_chr15_+_75491259	103082	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	106048	+	BC110367 TSC_hg19_v1_chr15_+_75494233	106069	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chr4	166265010	166265141	reg1024606.p1	5.567	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-16220	+	NM_001161521 NM_001161522 AK294103 BX647776	-133897	+	TSC_hg19_v1_chr4_+_166128825 BC036468 AF059569 AK315372 DQ893638 DQ895588 CU690356	-136150	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	35082	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	529379	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	1890536	-	NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BC036468|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AF059569|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AK315372|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##DQ893638|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##DQ895588|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.084071	
chr5	15824525	15824623	reg1025952.p1	5.567	+	TSC_hg19_v1_chr5_+_15500770 AF199356 AB463041	-323798	+	BC075061 TSC_hg19_v1_chr5_+_15500760	-323826	+	BC136424 TSC_hg19_v1_chr5_+_15500549	-324030	+	NM_001102562	355322	-	TSC_hg19_v1_chr5_-_16465884 BC010545 BC008752 NM_033414 AY046059	641302	-	NM_019000	684532	-	AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_001102562|MARCH11|441061|membrane-associated ring finger (C3HC4) 11##BC010545|ZNF622|90441|zinc finger protein 622##BC008752|ZNF622|90441|zinc finger protein 622##NM_033414|ZNF622|90441|zinc finger protein 622##AY046059|ZNF622|90441|zinc finger protein 622##NM_019000|FAM134B|54463|family with sequence similarity 134, member B	0.973216	CTCF.p2:17:0.973
chr5	138954758	138954905	reg1027981.p1	5.566	+	TSC_hg19_v1_chr5_+_138941350 U39317 AB590980	-13483	+	TSC_hg19_v1_chr5_+_138940966 AK001428 BC019052 AK001311 AY651263	-13906	+	TSC_hg19_v1_chr5_+_138940760 BC033349 NM_003339 NM_181838 BC048426	-14058	+	TSC_hg19_v1_chr5_+_139027874 AK024338	73043	+	TSC_hg19_v1_chr5_+_139027942 BC006428	73099	+	BC024040 BC041013 TSC_hg19_v1_chr5_+_139027968 BC050046 BC017439	73153	+	U39317|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001428|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC019052|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001311|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AY651263|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC033349|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_003339|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_181838|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC048426|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK024338|CXXC5|51523|CXXC finger protein 5##BC006428|CXXC5|51523|CXXC finger protein 5##BC024040|CXXC5|51523|CXXC finger protein 5##BC041013|CXXC5|51523|CXXC finger protein 5##BC050046|CXXC5|51523|CXXC finger protein 5##BC017439|CXXC5|51523|CXXC finger protein 5	0.839891	CTCF.p2:-4:0.840
chr6	138599533	138599646	reg1023918.p2	5.566	+	BC069109 NM_021635 AF189269 AF189270	-59963	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	-116453	+	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	-171021	-	TSC_hg19_v1_chr6_+_138725355 NM_014320 AF117616 BC016806 BC016807 AK057928 AY427823	125796	+	BC010290 TSC_hg19_v1_chr6_+_138725477 BC008205 BC093037 AF411610	125956	+	AK307584 NM_001144060 TSC_hg19_v1_chr6_-_138820579	220989	-	BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##NM_014320|HEBP2|23593|heme binding protein 2##AF117616|HEBP2|23593|heme binding protein 2##BC016806|HEBP2|23593|heme binding protein 2##BC016807|HEBP2|23593|heme binding protein 2##AK057928|HEBP2|23593|heme binding protein 2##AY427823|HEBP2|23593|heme binding protein 2##BC010290|HEBP2|23593|heme binding protein 2##BC008205|HEBP2|23593|heme binding protein 2##BC093037|HEBP2|23593|heme binding protein 2##AF411610|HEBP2|23593|heme binding protein 2##AK307584|NHSL1|57224|NHS-like 1##NM_001144060|NHSL1|57224|NHS-like 1	0.0	
chr11	78357795	78357895	reg1024368.p2	5.565	+	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-71950	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-72053	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	-228969	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	793879	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	4087053	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	4253672	-	AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_080491|GAB2|9846|GRB2-associated binding protein 2##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)	0.998257	CTCF.p2:-2:0.998
chr1	235895091	235895238	reg1025506.p1	5.565	+	BC022485 NM_001098721 NM_004485	-81111	-	TSC_hg19_v1_chr1_-_235813301 AK311781 NM_001098722	-81982	-	BC029564 NM_152490 TSC_hg19_v1_chr1_-_235667782	-227383	-	TSC_hg19_v1_chr1_-_236030193 BC020793	135019	-	NM_000081 U67615 TSC_hg19_v1_chr1_-_236030233	135080	-	TSC_hg19_v1_chr1_-_236228375 AB209448 CU692272	333213	-	BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##AK311781|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098722|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##BC029564|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_152490|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_000081|LYST|1130|lysosomal trafficking regulator##U67615|LYST|1130|lysosomal trafficking regulator##AB209448|NID1|4811|nidogen 1	0.481195	CTCF.p2:-14:0.481
chr3	159546391	159546512	reg1024777.p1	5.565	+	TSC_hg19_v1_chr3_+_159481881 AK309223	-64489	+	TSC_hg19_v1_chr3_+_158991090 AK314662	-555360	+	BC036535 NM_001197107 NM_001197108 NM_014575 TSC_hg19_v1_chr3_+_158991047	-555409	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	11242	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	11408	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	160281	+	AK309223|SCHIP1|29970|schwannomin interacting protein 1##AK314662|SCHIP1|29970|schwannomin interacting protein 1##BC036535|SCHIP1|29970|schwannomin interacting protein 1##NM_001197107|SCHIP1|29970|schwannomin interacting protein 1##NM_001197108|SCHIP1|29970|schwannomin interacting protein 1##NM_014575|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)	0.977631	CTCF.p2:-28:0.978
chr5	67583805	67583986	reg1022166.p1	5.565	+	TSC_hg19_v1_chr5_+_67511602 BC094795	-72288	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	-72315	+	BC109069 BC109070 D83597 NM_005582 AK313177	-1091295	-	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	399	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	2651	+	AK094785 NM_001242466 AK294919	4557	+	BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.0	
chr5	67730135	67730315	reg1020161.p1	5.565	+	AK094785 NM_001242466 AK294919	-141773	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-143679	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-145931	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	659578	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	659657	+	AK292925 TSC_hg19_v1_chr5_+_68389913	659688	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.0	
chrX	24168578	24168758	reg1024213.p2	5.565	+	X59739 X59740 TSC_hg19_v1_chrX_+_24167864	-796	+	AB209892 NM_001178086 NM_001178095 X59738 TSC_hg19_v1_chrX_+_24167845 NM_001178084 NM_001178085 NM_003410	-876	+	TSC_hg19_v1_chrX_+_24073072 AK222577 AK290397 AK312247 AB590041 CU676476 DQ891794 DQ894977 AB451230 AB451353 L19161	-95590	+	NM_001136233	162763	-	NM_001136234	212209	+	NM_001142386 NM_005391 AK301965 TSC_hg19_v1_chrX_+_24483405 BC015948 L42452 CU677533	314789	+	X59739|ZFX|7543|zinc finger protein, X-linked##X59740|ZFX|7543|zinc finger protein, X-linked##AB209892|ZFX|7543|zinc finger protein, X-linked##NM_001178086|ZFX|7543|zinc finger protein, X-linked##NM_001178095|ZFX|7543|zinc finger protein, X-linked##X59738|ZFX|7543|zinc finger protein, X-linked##NM_001178084|ZFX|7543|zinc finger protein, X-linked##NM_001178085|ZFX|7543|zinc finger protein, X-linked##NM_003410|ZFX|7543|zinc finger protein, X-linked##AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##NM_001136233|FAM48B2|170067|family with sequence similarity 48, member B2##NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1##NM_001142386|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_005391|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AK301965|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##BC015948|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##L42452|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3	0.881505	CTCF.p2:90:0.860
chr11	127363338	127363428	reg1025938.p1	5.564	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-490078	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-492658	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-492723	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	1028580	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	1028751	-	BX640634 NM_001143820	1094069	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.842506	CTCF.p2:10:0.843
chr2	241929317	241929434	reg1021184.p1	5.564	+	AK056601 NM_001085437	-93803	-	BC125154 BC125155 AK026324 NM_024861 AK096434	-97956	-	NM_000030 X53414 BC132819 D13368 S71388 AK315331 TSC_hg19_v1_chr2_+_241808251 AK292754 AK298420 AB292648 X56092 AF348451 AK298400 AK316495	-121107	+	NM_001080437	8879	+	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	112351	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	159496	-	AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54##NM_000030|AGXT|189|alanine-glyoxylate aminotransferase##X53414|AGXT|189|alanine-glyoxylate aminotransferase##BC132819|AGXT|189|alanine-glyoxylate aminotransferase##D13368|AGXT|189|alanine-glyoxylate aminotransferase##AK315331|AGXT|189|alanine-glyoxylate aminotransferase##AK292754|AGXT|189|alanine-glyoxylate aminotransferase##AK298420|AGXT|189|alanine-glyoxylate aminotransferase##AB292648|AGXT|189|alanine-glyoxylate aminotransferase##X56092|AGXT|189|alanine-glyoxylate aminotransferase##AF348451|AGXT|189|alanine-glyoxylate aminotransferase##AK298400|AGXT|189|alanine-glyoxylate aminotransferase##AK316495|AGXT|189|alanine-glyoxylate aminotransferase##NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase	0.786207	CTCF.p2:1:0.786
chr2	33495763	33495900	reg1026104.p1	5.564	+	TSC_hg19_v1_chr2_+_33359657 NM_000627 NM_001166264 NM_001166265 NM_001166266 AB208801 BC130289 BC144127 BC144128 M34057 AB384737 AF489528	-136126	+	NM_206943	-323463	+	NM_001193509 NM_017735 AK299196 BC063791 TSC_hg19_v1_chr2_+_32853177 AK027570	-642697	+	AK125551 TSC_hg19_v1_chr2_+_33661417 BC027849 NM_170672 AK292983	165617	+	NM_001139488	205489	+	TSC_hg19_v1_chr2_+_33701715 BX647990	205865	+	NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1##AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1##M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1##AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_206943|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001193509|TTC27|55622|tetratricopeptide repeat domain 27##NM_017735|TTC27|55622|tetratricopeptide repeat domain 27##AK299196|TTC27|55622|tetratricopeptide repeat domain 27##BC063791|TTC27|55622|tetratricopeptide repeat domain 27##AK027570|TTC27|55622|tetratricopeptide repeat domain 27##AK125551|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC027849|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_170672|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK292983|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_001139488|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)	0.981015	CTCF.p2:5:0.981
chr6	143206712	143206893	reg1022011.p2	5.564	+	TSC_hg19_v1_chr6_+_142623443 BX640873	-583396	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-583733	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-696173	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	59526	-	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	175193	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	175234	+	BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1	0.0	
chr1	154763850	154764030	reg1023893.p1	5.563	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-163475	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-163526	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-183240	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	68322	-	BX649146 TSC_hg19_v1_chr1_-_154840541	76561	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	78806	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.32198	CTCF.p2:-19:0.322
chr13	40258833	40258970	reg1022165.p1	5.563	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-29040	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-81539	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-81574	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	981811	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	1086391	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	1086431	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.999845	CTCF.p2:-32:1.000
chr16	698127	698275	reg1027278.p1	5.563	+	TSC_hg19_v1_chr16_+_691949 BC007346 BC111391	-6266	+	TSC_hg19_v1_chr16_+_691832 BC001912 NM_138418	-6364	+	TSC_hg19_v1_chr16_-_686303 AK293046 AK294482 AK295628 BC047118 AK057077 BC007207 NM_001040160 NM_001040161 NM_001040162 NM_001040165 NM_032366	-11869	-	TSC_hg19_v1_chr16_+_699362 AB067511 BC121185 BC121186 AK091062 AX746759 NM_145294	1178	+	TSC_hg19_v1_chr16_+_718131 NM_138769 AY207375 AK308984 BC014942 AL834163	19906	+	TSC_hg19_v1_chr16_+_718165 AK024450 AJ517413	19977	+	BC007346|FAM195A|84331|family with sequence similarity 195, member A##BC111391|FAM195A|84331|family with sequence similarity 195, member A##BC001912|FAM195A|84331|family with sequence similarity 195, member A##NM_138418|FAM195A|84331|family with sequence similarity 195, member A##AK294482|C16orf13|84326|chromosome 16 open reading frame 13##AK295628|C16orf13|84326|chromosome 16 open reading frame 13##BC047118|C16orf13|84326|chromosome 16 open reading frame 13##AK057077|C16orf13|84326|chromosome 16 open reading frame 13##BC007207|C16orf13|84326|chromosome 16 open reading frame 13##NM_001040160|C16orf13|84326|chromosome 16 open reading frame 13##NM_001040161|C16orf13|84326|chromosome 16 open reading frame 13##NM_001040162|C16orf13|84326|chromosome 16 open reading frame 13##NM_001040165|C16orf13|84326|chromosome 16 open reading frame 13##NM_032366|C16orf13|84326|chromosome 16 open reading frame 13##AB067511|WDR90|197335|WD repeat domain 90##BC121185|WDR90|197335|WD repeat domain 90##BC121186|WDR90|197335|WD repeat domain 90##AK091062|WDR90|197335|WD repeat domain 90##NM_145294|WDR90|197335|WD repeat domain 90##NM_138769|RHOT2|89941|ras homolog gene family, member T2##AY207375|RHOT2|89941|ras homolog gene family, member T2##AK308984|RHOT2|89941|ras homolog gene family, member T2##BC014942|RHOT2|89941|ras homolog gene family, member T2##AL834163|RHOT2|89941|ras homolog gene family, member T2##AK024450|RHOT2|89941|ras homolog gene family, member T2##AJ517413|RHOT2|89941|ras homolog gene family, member T2	0.024864	
chr17	74711044	74711161	reg1028412.p1	5.563	+	TSC_hg19_v1_chr17_-_74707067 BC053983	-4002	-	TSC_hg19_v1_chr17_-_74707048 AB590448 NM_001008528 NM_001008529 NM_198530 BC094776	-4070	-	AY096001 CU692632 BC022462 TSC_hg19_v1_chr17_-_74639807 AK310906 AY358918 BC063830 NM_018414	-71296	-	BC016837 TSC_hg19_v1_chr17_-_74722026	10890	-	TSC_hg19_v1_chr17_-_74722582 AB073711 AB011157 BC066654	11453	-	TSC_hg19_v1_chr17_-_74722619 AK314541	11514	-	BC053983|MXRA7|439921|matrix-remodelling associated 7##NM_001008528|MXRA7|439921|matrix-remodelling associated 7##NM_001008529|MXRA7|439921|matrix-remodelling associated 7##NM_198530|MXRA7|439921|matrix-remodelling associated 7##BC094776|MXRA7|439921|matrix-remodelling associated 7##AY096001|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##BC022462|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##AK310906|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##AY358918|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##BC063830|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##NM_018414|ST6GALNAC1|55808|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1##BC016837|JMJD6|23210|jumonji domain containing 6##AB073711|JMJD6|23210|jumonji domain containing 6##AB011157|JMJD6|23210|jumonji domain containing 6##BC066654|JMJD6|23210|jumonji domain containing 6##AK314541|JMJD6|23210|jumonji domain containing 6	0.987865	CTCF.p2:4:0.988
chr3	108041305	108041433	reg1021562.p1	5.563	+	BC035971 NM_007072	-20038	+	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	-25968	+	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	-100077	-	AB023217 NM_014981	206799	-	AB463087 AM393250 HQ258525 BC082961 TSC_hg19_v1_chr3_-_108308269 BC130564 BC136371 BC063433 AL713689 AF334474 AK056933 AK308315	266891	-	NM_014648 TSC_hg19_v1_chr3_+_108308395	266996	+	BC035971|HHLA2|11148|HERV-H LTR-associating 2##NM_007072|HHLA2|11148|HERV-H LTR-associating 2##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AB023217|MYH15|22989|myosin, heavy chain 15##NM_014981|MYH15|22989|myosin, heavy chain 15##AM393250|KIAA1524|57650|KIAA1524##BC082961|KIAA1524|57650|KIAA1524##BC130564|KIAA1524|57650|KIAA1524##BC136371|KIAA1524|57650|KIAA1524##BC063433|KIAA1524|57650|KIAA1524##AL713689|KIAA1524|57650|KIAA1524##AF334474|KIAA1524|57650|KIAA1524##AK056933|KIAA1524|57650|KIAA1524##AK308315|KIAA1524|57650|KIAA1524##NM_014648|DZIP3|9666|DAZ interacting protein 3, zinc finger	0.039345	
chr8	92088913	92089082	reg1024417.p1	5.563	+	NM_016023 TSC_hg19_v1_chr8_+_92082548 BX647772 AK293843 BC029760 AK310823 AK291646 AF151836	-6483	+	TSC_hg19_v1_chr8_-_92082268 BC067244 BC105990 BC030623	-6658	-	TSC_hg19_v1_chr8_-_92053091 AX775961 BC033892 AK313783 NM_018710	-35875	-	AK097393 NM_001129890 AK130865	25862	+	AJ413229 NM_052832 NM_134266 AF331521 AJ413228 AJ413230	172533	+	D14289 NM_175636	940888	-	NM_016023|OTUD6B|51633|OTU domain containing 6B##BX647772|OTUD6B|51633|OTU domain containing 6B##AK293843|OTUD6B|51633|OTU domain containing 6B##BC029760|OTUD6B|51633|OTU domain containing 6B##AK310823|OTUD6B|51633|OTU domain containing 6B##AK291646|OTUD6B|51633|OTU domain containing 6B##AF151836|OTUD6B|51633|OTU domain containing 6B##AX775961|TMEM55A|55529|transmembrane protein 55A##BC033892|TMEM55A|55529|transmembrane protein 55A##AK313783|TMEM55A|55529|transmembrane protein 55A##NM_018710|TMEM55A|55529|transmembrane protein 55A##AK097393|LRRC69|100130742|leucine rich repeat containing 69##NM_001129890|LRRC69|100130742|leucine rich repeat containing 69##AK130865|LRRC69|100130742|leucine rich repeat containing 69##AJ413229|SLC26A7|115111|solute carrier family 26, member 7##NM_052832|SLC26A7|115111|solute carrier family 26, member 7##NM_134266|SLC26A7|115111|solute carrier family 26, member 7##AF331521|SLC26A7|115111|solute carrier family 26, member 7##AJ413228|SLC26A7|115111|solute carrier family 26, member 7##AJ413230|SLC26A7|115111|solute carrier family 26, member 7##D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	0.921617	CTCF.p2:24:0.922
chr9	65992975	65993085	reg1024321.p1	5.563	+	BC040528 NM_001113541 NM_015667	-483421	-	TSC_hg19_v1_chr9_+_45441926 BC006438	-20551104	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-22308187	+	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	464271	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	465466	-	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	501166	-	BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##AB593083|LOC100132249|100132249|uncharacterized LOC100132249	0.172335	
chr1	153765808	153765903	reg1035260.p1	5.562	+	BC003041 BC009916 NM_024330 AK075377 TSC_hg19_v1_chr1_+_153747897 AK123997 AY358409 AK074134 DQ893429 DQ895951 AK027499 BC029792	-17989	+	TSC_hg19_v1_chr1_+_153700548 BX640950 CR749376 CR627233 BC116458 AK290025 CR749212 BX640786 NM_023015	-65302	+	TSC_hg19_v1_chr1_+_153651222 BC063304 AK025024 NM_000906 X15357	-114559	+	AK094665 NM_020699 TSC_hg19_v1_chr1_-_153895452	129596	-	TSC_hg19_v1_chr1_-_153919148 AB007945 NM_014856	153291	-	AY726597 AK096382 BC053562 TSC_hg19_v1_chr1_-_153931074 AF289574	165138	-	BC003041|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC009916|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##NM_024330|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK075377|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK123997|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AY358409|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK074134|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ893429|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ895951|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK027499|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC029792|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BX640950|INTS3|65123|integrator complex subunit 3##CR749376|INTS3|65123|integrator complex subunit 3##CR627233|INTS3|65123|integrator complex subunit 3##BC116458|INTS3|65123|integrator complex subunit 3##AK290025|INTS3|65123|integrator complex subunit 3##CR749212|INTS3|65123|integrator complex subunit 3##BX640786|INTS3|65123|integrator complex subunit 3##NM_023015|INTS3|65123|integrator complex subunit 3##BC063304|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##AK025024|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##NM_000906|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##X15357|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B##NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B##AB007945|DENND4B|9909|DENN/MADD domain containing 4B##NM_014856|DENND4B|9909|DENN/MADD domain containing 4B##AY726597|CRTC2|200186|CREB regulated transcription coactivator 2##AK096382|CRTC2|200186|CREB regulated transcription coactivator 2##BC053562|CRTC2|200186|CREB regulated transcription coactivator 2##AF289574|CRTC2|200186|CREB regulated transcription coactivator 2	0.835907	CTCF.p2:56:0.836
chr12	52317312	52317445	reg1029698.p1	5.562	+	NM_001077401 AK303331 L17075 BC042637 CU692110	-11194	+	NM_000020 Z22533 TSC_hg19_v1_chr12_+_52301290 AK298493	-16129	+	HM161905 TSC_hg19_v1_chr12_+_52300731 HM161906	-16667	+	TSC_hg19_v1_chr12_+_52345437 BC040531 NM_004302 NM_020328	28067	+	TSC_hg19_v1_chr12_+_52345493 AK299120 L10125 BC000254 AB384957 BT007072 CU674106 EU831986 EU832079 L10126 U14722 Z22536	28119	+	AK299496 NM_020327	29785	+	NM_001077401|ACVRL1|94|activin A receptor type II-like 1##AK303331|ACVRL1|94|activin A receptor type II-like 1##L17075|ACVRL1|94|activin A receptor type II-like 1##BC042637|ACVRL1|94|activin A receptor type II-like 1##NM_000020|ACVRL1|94|activin A receptor type II-like 1##Z22533|ACVRL1|94|activin A receptor type II-like 1##AK298493|ACVRL1|94|activin A receptor type II-like 1##HM161905|ACVRL1|94|activin A receptor type II-like 1##HM161906|ACVRL1|94|activin A receptor type II-like 1##BC040531|ACVR1B|91|activin A receptor, type IB##NM_004302|ACVR1B|91|activin A receptor, type IB##NM_020328|ACVR1B|91|activin A receptor, type IB##AK299120|ACVR1B|91|activin A receptor, type IB##L10125|ACVR1B|91|activin A receptor, type IB##BC000254|ACVR1B|91|activin A receptor, type IB##BT007072|ACVR1B|91|activin A receptor, type IB##EU831986|ACVR1B|91|activin A receptor, type IB##EU832079|ACVR1B|91|activin A receptor, type IB##L10126|ACVR1B|91|activin A receptor, type IB##U14722|ACVR1B|91|activin A receptor, type IB##Z22536|ACVR1B|91|activin A receptor, type IB##AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB	0.99871	CTCF.p2:-5:0.999
chr17	40215900	40216000	reg1024577.p2	5.562	+	NM_001242704	-25907	-	TSC_hg19_v1_chr17_+_40172124 AK027265 AK297975 AK054571 BC007316 BC007450	-43804	+	NM_001144927 NM_001144928 NM_001144929 NM_017595 TSC_hg19_v1_chr17_+_40172107	-43852	+	BC014949 AK296840 AK300900 AK021416 AK225549 NM_024119	48768	-	TSC_hg19_v1_chr17_-_40273386 AB527835 AF029777 BC032743 BC105977 BC039907 NM_021078	57399	-	NM_033194 BC093991 BC093993 AK130947	58851	+	NM_001242704|ZNF385C|201181|zinc finger protein 385C##AK027265|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK297975|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK054571|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007316|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007450|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144927|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144928|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144929|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_017595|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC014949|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK296840|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK300900|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK021416|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK225549|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_024119|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AF029777|KAT2A|2648|K(lysine) acetyltransferase 2A##BC032743|KAT2A|2648|K(lysine) acetyltransferase 2A##BC105977|KAT2A|2648|K(lysine) acetyltransferase 2A##BC039907|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_021078|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_033194|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093991|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093993|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##AK130947|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9	0.119059	
chr19	43695962	43696094	reg1026388.p1	5.562	+	AB527988 EU831982 EU832075 M73713 M25384 BC012607 NM_001130014 NM_002781	-5406	-	DQ891359 EU832659 EU832736 M20882 AK002132 BC022316 NM_031246	-109221	-	CU676656 M69245 U25988 BC020711 NM_001113410 NM_002785 NM_203287	-165442	-	U18468 U18469 M94891 X17097 BC008405 BC013431 BC063127 NM_002780 NM_213633 AK075149	13727	-	CR407605 CU676704 DQ891385 DQ894561 U25987 M34481 M94890 M58591 M34421 X17610 AK300187 AK300229 BC005925 BC020759 AK313256 NM_002784	77603	-	NM_020406 AF146747 AK290965 TSC_hg19_v1_chr19_+_43857837 AJ290452 AJ310433 AK225226 AM884905 BC029167 AY358932 AB237911 AB527936 CU688610 DQ892045 DQ895239 AJ305326 BT020111	161817	+	EU831982|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##EU832075|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M73713|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M25384|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##BC012607|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_001130014|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_002781|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##DQ891359|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832659|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832736|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M20882|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##BC022316|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##NM_031246|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M69245|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##U25988|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##BC020711|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_001113410|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_002785|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_203287|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##U18468|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##U18469|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##M94891|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##X17097|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC013431|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC063127|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##NM_002780|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##NM_213633|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK075149|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##CR407605|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##DQ891385|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##DQ894561|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##U25987|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M34481|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M94890|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M58591|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M34421|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##X17610|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK300187|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK300229|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##BC005925|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##BC020759|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK313256|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##NM_002784|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##NM_020406|CD177|57126|CD177 molecule##AF146747|CD177|57126|CD177 molecule##AK290965|CD177|57126|CD177 molecule##AJ290452|CD177|57126|CD177 molecule##AJ310433|CD177|57126|CD177 molecule##AK225226|CD177|57126|CD177 molecule##AM884905|CD177|57126|CD177 molecule##BC029167|CD177|57126|CD177 molecule##AY358932|CD177|57126|CD177 molecule##AB237911|CD177|57126|CD177 molecule##DQ892045|CD177|57126|CD177 molecule##DQ895239|CD177|57126|CD177 molecule##AJ305326|CD177|57126|CD177 molecule##BT020111|CD177|57126|CD177 molecule	0.694153	CTCF.p2:16:0.694
chr2	47537638	47537819	reg1024549.p2	5.562	+	TSC_hg19_v1_chr2_-_47403685 NM_001743	-134019	-	TSC_hg19_v1_chr2_-_47403656 BC008437	-134074	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	-134078	-	NM_002354 TSC_hg19_v1_chr2_+_47596376	58614	+	TSC_hg19_v1_chr2_+_47596449 AK026585 BC014785 M26481 M32325 X14758 M33011 M32306 DQ891338 DQ894520 CR542259 CR542283	58817	+	TSC_hg19_v1_chr2_+_47630218 AK304496	92476	+	NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC008437|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##NM_002354|EPCAM|4072|epithelial cell adhesion molecule##AK026585|EPCAM|4072|epithelial cell adhesion molecule##BC014785|EPCAM|4072|epithelial cell adhesion molecule##M26481|EPCAM|4072|epithelial cell adhesion molecule##M32325|EPCAM|4072|epithelial cell adhesion molecule##X14758|EPCAM|4072|epithelial cell adhesion molecule##M33011|EPCAM|4072|epithelial cell adhesion molecule##M32306|EPCAM|4072|epithelial cell adhesion molecule##DQ891338|EPCAM|4072|epithelial cell adhesion molecule##DQ894520|EPCAM|4072|epithelial cell adhesion molecule##CR542259|EPCAM|4072|epithelial cell adhesion molecule##CR542283|EPCAM|4072|epithelial cell adhesion molecule##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.0	
chrX	40412151	40412300	reg1029040.p1	5.562	+	BC114220 NM_001123383 NM_001123384	-375644	-	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	-455533	-	TSC_hg19_v1_chrX_+_38663536 AK001248	-1748685	+	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	27961	+	AF291814 TSC_hg19_v1_chrX_+_40440231 AK293510 BC084541 AK297007 AF109363	28017	+	TSC_hg19_v1_chrX_+_40440264 AK314633 AK315948	28047	+	BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF291814|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK293510|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##BC084541|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK297007|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF109363|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK314633|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK315948|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.465898	CTCF.p2:-9:0.466
chrX	70998339	70998465	reg1027770.p1	5.562	+	NM_001145139 NM_001145140	-15263	+	NM_001145139 NM_001145140	-60268	-	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	-160070	-	TSC_hg19_v1_chrX_+_71130694 NM_001013627	132376	+	AB082532 BC151224 NM_001024455 TSC_hg19_v1_chrX_-_71351772	353389	-	AK126598 AY572224 NM_207422	365631	+	NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001013627|NHSL2|340527|NHS-like 2##AB082532|RGAG4|340526|retrotransposon gag domain containing 4##BC151224|RGAG4|340526|retrotransposon gag domain containing 4##NM_001024455|RGAG4|340526|retrotransposon gag domain containing 4##AK126598|FLJ44635|392490|TPT1-like protein##AY572224|FLJ44635|392490|TPT1-like protein##NM_207422|FLJ44635|392490|TPT1-like protein	0.0	
chr11	7678708	7678821	reg1026846.p1	5.561	+	AK296718 TSC_hg19_v1_chr11_+_7618421	-60346	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	-143521	+	NM_003621 BC021714 TSC_hg19_v1_chr11_+_7535171	-143661	+	AB209000 BC001346 AF169802 NM_016229	15988	-	NM_198185	49176	-	AF173006 NM_153444 HQ258379 BC101710 BC113557	139739	-	AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##NM_003621|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##BC021714|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AB209000|CYB5R2|51700|cytochrome b5 reductase 2##BC001346|CYB5R2|51700|cytochrome b5 reductase 2##AF169802|CYB5R2|51700|cytochrome b5 reductase 2##NM_016229|CYB5R2|51700|cytochrome b5 reductase 2##NM_198185|OVCH2|341277|ovochymase 2 (gene/pseudogene)##AF173006|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##NM_153444|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##HQ258379|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##BC101710|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2##BC113557|OR5P2|120065|olfactory receptor, family 5, subfamily P, member 2	0.550639	CTCF.p2:11:0.551
chr2	134642444	134642549	reg1026464.p2	5.561	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-316458	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-463142	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-1102802	-	NM_002410 D17716 AF113921	369389	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	834060	-	AK125008 NM_138326 BC016018 BC107420 AB071418	953722	+	AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	0.0	
chr6	15151517	15151689	reg1024226.p1	5.561	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-1033581	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-1033698	+	NM_001251901	-1034117	+	TSC_hg19_v1_chr6_+_15245702 AK302624	94114	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	94809	+	BC033996 TSC_hg19_v1_chr6_-_15248900	97298	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.0	
chr10	22299965	22300119	reg1020311.p1	5.560	+	TSC_hg19_v1_chr10_-_22292660 BC110894 NM_022365 AK308369	-7377	-	AY225122 AK027263 TSC_hg19_v1_chr10_-_22292522 BC014436	-7593	-	AY598745 CU687346 NM_001195626 AF060929 AF060934 AF060935 AF060936 AF060937 AF060938	-476417	+	NM_001199938	198869	-	TSC_hg19_v1_chr10_+_22540999 AK094582	240971	+	TSC_hg19_v1_chr10_+_22605316 NM_001204062 NM_012071 BX647275 AF201948 BC022898 AF078848 AK128789 AK313235 AK295109 AY542159	305283	+	BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AY225122|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK027263|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC014436|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AY598745|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##NM_001195626|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060929|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060934|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060935|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060936|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060937|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060938|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1##AK094582|LOC100130992|100130992|uncharacterized LOC100130992##NM_001204062|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough##NM_012071|COMMD3|23412|COMM domain containing 3##BX647275|COMMD3|23412|COMM domain containing 3##AF201948|COMMD3|23412|COMM domain containing 3##BC022898|COMMD3|23412|COMM domain containing 3##AF078848|COMMD3|23412|COMM domain containing 3##AK128789|COMMD3|23412|COMM domain containing 3##AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough##AY542159|COMMD3|23412|COMM domain containing 3	0.993703	CTCF.p2:7:0.994
chr11	86319362	86319517	reg1008456.p1	5.560	+	AK131331 NM_001156474 NM_021827	-233662	+	NM_016401 TSC_hg19_v1_chr11_+_86013281 AF161487 AF161527 AK001447 AK223198 BC015991 BC021621 AK298763 BC018080 BC001677 BC006476 DQ892731 DQ895977 CU674828 CU676162	-306070	+	TSC_hg19_v1_chr11_+_85956277 BC068995 AK294133 CU686693 AB463023 EU446743 AF078933 AK301265 BC047672	-363153	+	TSC_hg19_v1_chr11_-_86383218 BC022472 NM_001014811 AK092181	63766	-	X79440 TSC_hg19_v1_chr11_-_86383470 NM_006680 AK313695	64003	-	TSC_hg19_v1_chr11_-_86383659 AK300974 NM_001161586	64226	-	AK131331|CCDC81|60494|coiled-coil domain containing 81##NM_001156474|CCDC81|60494|coiled-coil domain containing 81##NM_021827|CCDC81|60494|coiled-coil domain containing 81##NM_016401|C11orf73|51501|chromosome 11 open reading frame 73##AF161487|C11orf73|51501|chromosome 11 open reading frame 73##AF161527|C11orf73|51501|chromosome 11 open reading frame 73##AK001447|C11orf73|51501|chromosome 11 open reading frame 73##AK223198|C11orf73|51501|chromosome 11 open reading frame 73##BC015991|C11orf73|51501|chromosome 11 open reading frame 73##BC021621|C11orf73|51501|chromosome 11 open reading frame 73##AK298763|C11orf73|51501|chromosome 11 open reading frame 73##BC018080|C11orf73|51501|chromosome 11 open reading frame 73##BC001677|C11orf73|51501|chromosome 11 open reading frame 73##BC006476|C11orf73|51501|chromosome 11 open reading frame 73##DQ892731|C11orf73|51501|chromosome 11 open reading frame 73##DQ895977|C11orf73|51501|chromosome 11 open reading frame 73##BC068995|EED|8726|embryonic ectoderm development##AK294133|EED|8726|embryonic ectoderm development##EU446743|EED|8726|embryonic ectoderm development##AF078933|EED|8726|embryonic ectoderm development##AK301265|EED|8726|embryonic ectoderm development##BC047672|EED|8726|embryonic ectoderm development##BC022472|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001014811|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK092181|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##X79440|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_006680|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK313695|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK300974|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001161586|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial	0.092898	
chr14	63905158	63905338	reg1025949.p1	5.560	+	NM_145171	-119656	-	NM_020663 AF087862 AK027351 AK027278 BC062575 AB209218 AF309563	-234067	+	AK074484 NM_172376	-336665	-	AB451233 AB451358 EU447000 TSC_hg19_v1_chr14_-_64006406	101158	-	BC093766 BC101479 BC143231 BC143234 TSC_hg19_v1_chr14_-_64009581	104325	-	TSC_hg19_v1_chr14_-_64009815 BC048305	104580	-	NM_145171|GPHB5|122876|glycoprotein hormone beta 5##NM_020663|RHOJ|57381|ras homolog gene family, member J##AF087862|RHOJ|57381|ras homolog gene family, member J##AK027351|RHOJ|57381|ras homolog gene family, member J##AK027278|RHOJ|57381|ras homolog gene family, member J##BC062575|RHOJ|57381|ras homolog gene family, member J##AB209218|RHOJ|57381|ras homolog gene family, member J##AF309563|RHOJ|57381|ras homolog gene family, member J##AK074484|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172376|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AB451233|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AB451358|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##EU447000|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC093766|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC101479|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC143231|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC143234|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC048305|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform	0.167181	
chr14	93626739	93626829	reg1022285.p1	5.560	+	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	-44570	-	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	-45193	-	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-237187	+	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	24416	-	TSC_hg19_v1_chr14_-_93651243 NM_022151	24461	-	AK315522 TSC_hg19_v1_chr14_-_93651261	24484	-	BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1##NM_022151|MOAP1|64112|modulator of apoptosis 1##AK315522|MOAP1|64112|modulator of apoptosis 1	0.053843	
chr4	129301167	129301285	reg1025948.p2	5.560	+	AK131272 NM_006320	-91243	-	TSC_hg19_v1_chr4_-_129208969 BC092478	-92235	-	AK091741 AX747155 TSC_hg19_v1_chr4_-_129208964 BC016692	-92262	-	TSC_hg19_v1_chr4_+_129730875 NM_024900 NM_199320 AK027620 AF520952 AK304815 AK127326	429644	+	TSC_hg19_v1_chr4_+_129732427 BC032376	431227	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	713364	-	AK131272|PGRMC2|10424|progesterone receptor membrane component 2##NM_006320|PGRMC2|10424|progesterone receptor membrane component 2##BC092478|PGRMC2|10424|progesterone receptor membrane component 2##AK091741|PGRMC2|10424|progesterone receptor membrane component 2##BC016692|PGRMC2|10424|progesterone receptor membrane component 2##NM_024900|PHF17|79960|PHD finger protein 17##NM_199320|PHF17|79960|PHD finger protein 17##AK027620|PHF17|79960|PHD finger protein 17##AF520952|PHF17|79960|PHD finger protein 17##AK304815|PHF17|79960|PHD finger protein 17##AK127326|PHF17|79960|PHD finger protein 17##BC032376|PHF17|79960|PHD finger protein 17##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1	0.974192	CTCF.p2:-13:0.920
chr4	152020558	152020671	reg1021655.p2	5.560	+	TSC_hg19_v1_chr4_-_151936880 AK098039	-83724	-	AF216648 NM_006726	-83966	-	TSC_hg19_v1_chr4_-_151936437 AF467287 NM_001199282 BC064834	-84196	-	TSC_hg19_v1_chr4_+_152020753 NM_001006 BC001708 M84711 AK308947 BC070211 AK291075 AK296121 BC066926 D28374 AK129825 AK311788 M77234 BC009404 BC018954 BC000204 BC004981 BC009219 BC017123 BC071916 L13802 BC006298 DQ891143 DQ894322 AB464167 CU688198	153	+	X75686 BC108890 BC108891 BC108892 BC108893 NM_001128924	76065	-	BC032404 BX647422 NM_001009555 NM_001128923	126975	-	AK098039|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##AF216648|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_006726|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##AF467287|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_001199282|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##BC064834|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_001006|RPS3A|6189|ribosomal protein S3A##BC001708|RPS3A|6189|ribosomal protein S3A##M84711|RPS3A|6189|ribosomal protein S3A##AK308947|RPS3A|6189|ribosomal protein S3A##BC070211|RPS3A|6189|ribosomal protein S3A##AK291075|RPS3A|6189|ribosomal protein S3A##BC066926|RPS3A|6189|ribosomal protein S3A##D28374|RPS3A|6189|ribosomal protein S3A##AK129825|RPS3A|6189|ribosomal protein S3A##AK311788|RPS3A|6189|ribosomal protein S3A##M77234|RPS3A|6189|ribosomal protein S3A##BC009404|RPS3A|6189|ribosomal protein S3A##BC018954|RPS3A|6189|ribosomal protein S3A##BC000204|RPS3A|6189|ribosomal protein S3A##BC004981|RPS3A|6189|ribosomal protein S3A##BC009219|RPS3A|6189|ribosomal protein S3A##BC017123|RPS3A|6189|ribosomal protein S3A##BC071916|RPS3A|6189|ribosomal protein S3A##L13802|RPS3A|6189|ribosomal protein S3A##BC006298|RPS3A|6189|ribosomal protein S3A##DQ891143|RPS3A|6189|ribosomal protein S3A##DQ894322|RPS3A|6189|ribosomal protein S3A##BC108890|SH3D19|152503|SH3 domain containing 19##BC108891|SH3D19|152503|SH3 domain containing 19##BC108892|SH3D19|152503|SH3 domain containing 19##BC108893|SH3D19|152503|SH3 domain containing 19##NM_001128924|SH3D19|152503|SH3 domain containing 19##BC032404|SH3D19|152503|SH3 domain containing 19##BX647422|SH3D19|152503|SH3 domain containing 19##NM_001009555|SH3D19|152503|SH3 domain containing 19##NM_001128923|SH3D19|152503|SH3 domain containing 19	0.079685	
chr4	31047472	31047629	reg1023872.p1	5.560	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-325091	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-325356	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-325551	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	5198487	-	AK131492 NM_001136536 AK304357 AK316523	5235696	+	BC157885 NM_001170700	5238093	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.991891	CTCF.p2:-7:0.992
chrX	128735265	128735376	reg1025937.p1	5.560	+	TSC_hg19_v1_chrX_+_128674247 AK226116 BC094726 NM_000276 NM_001587 U57627 AK293107 BC130612 BC144106 BC025253 AB384825	-61022	+	TSC_hg19_v1_chrX_-_128657468 NM_003069 NM_139035	-77858	-	EU636009 TSC_hg19_v1_chrX_-_128657443	-77876	-	BC021104 NM_017413	53602	-	AK300954 U90724 NM_003399 BC126174 BC143901	137656	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	178567	+	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe##U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe##AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_003069|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_139035|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##EU636009|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC021104|APLN|8862|apelin##NM_017413|APLN|8862|apelin##AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3	0.999378	CTCF.p2:-20:0.999
chr11	100803350	100803476	reg1026549.p2	5.559	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	-245285	+	AB013802 AB013803 NM_175566	-1376540	+	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	-1911664	+	AK314174 AF247167 NM_032021	59351	+	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	196386	-	AK304853 TSC_hg19_v1_chr11_-_101000531 NM_000926	197090	-	NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor##AK304853|PGR|5241|progesterone receptor##NM_000926|PGR|5241|progesterone receptor	0.935528	CTCF.p2:10:0.936
chr12	5052973	5053154	reg1018825.p2	5.559	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	-34003	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	-134648	+	AJ271385 NM_017417 BC140888 BC140889	-223295	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	100056	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	488213	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	550275	+	NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3	0.0	
chr12	66627875	66628014	reg1023934.p1	5.559	+	BC069388 AK298645 TSC_hg19_v1_chr12_+_66583064 AB590803 CU691242	-44891	+	TSC_hg19_v1_chr12_+_66583004 AF113136	-44934	+	TSC_hg19_v1_chr12_+_66582993 BC029493 NM_001142523 NM_007199 BC047399 AK314040 BC057800	-44986	+	TSC_hg19_v1_chr12_+_66696305 NM_033647 BC143409 BC143411 AK290894 AK024464 AB527324 AF319995	68385	+	BC115393 BC115394 TSC_hg19_v1_chr12_-_67072757 AK307576	444812	-	TSC_hg19_v1_chr12_-_67072881 AK095519 NM_001178074 NM_021150	444958	-	BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3##NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3##NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3##NM_033647|HELB|92797|helicase (DNA) B##BC143409|HELB|92797|helicase (DNA) B##BC143411|HELB|92797|helicase (DNA) B##AK290894|HELB|92797|helicase (DNA) B##AF319995|HELB|92797|helicase (DNA) B##BC115393|GRIP1|23426|glutamate receptor interacting protein 1##BC115394|GRIP1|23426|glutamate receptor interacting protein 1##AK307576|GRIP1|23426|glutamate receptor interacting protein 1##AK095519|GRIP1|23426|glutamate receptor interacting protein 1##NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1##NM_021150|GRIP1|23426|glutamate receptor interacting protein 1	0.574305	CTCF.p2:-33:0.574
chr12	94136041	94136130	reg1013654.p1	5.559	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-64902	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-170484	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-171265	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	406419	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	717446	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	717557	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.0	
chr15	78167571	78167700	reg1024066.p1	5.559	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-242855	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-242936	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-454373	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	202318	-	NM_001101404	217291	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	256127	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.995074	CTCF.p2:4:0.995
chr7	142699341	142699431	reg1016758.p1	5.559	+	M64934 TSC_hg19_v1_chr7_-_142659447 DQ896776 EU176416 BC003135 NM_000420	-39929	-	BC050639 TSC_hg19_v1_chr7_-_142659405 AK314831	-39985	-	BC014596 NM_178829 AB083483 AB083484 AB464498	-62727	+	NM_001001658 BC137048 BC137049	24863	-	BC137044 NM_001001667	50040	+	BC010950 AK312227 BC010951 NM_002652 Y10179 J03460	129790	+	M64934|KEL|3792|Kell blood group, metallo-endopeptidase##DQ896776|KEL|3792|Kell blood group, metallo-endopeptidase##EU176416|KEL|3792|Kell blood group, metallo-endopeptidase##BC003135|KEL|3792|Kell blood group, metallo-endopeptidase##NM_000420|KEL|3792|Kell blood group, metallo-endopeptidase##BC050639|KEL|3792|Kell blood group, metallo-endopeptidase##AK314831|KEL|3792|Kell blood group, metallo-endopeptidase##BC014596|C7orf34|135927|chromosome 7 open reading frame 34##NM_178829|C7orf34|135927|chromosome 7 open reading frame 34##AB083483|C7orf34|135927|chromosome 7 open reading frame 34##AB083484|C7orf34|135927|chromosome 7 open reading frame 34##NM_001001658|OR9A2|135924|olfactory receptor, family 9, subfamily A, member 2##BC137048|OR9A2|135924|olfactory receptor, family 9, subfamily A, member 2##BC137049|OR9A2|135924|olfactory receptor, family 9, subfamily A, member 2##BC137044|OR6V1|346517|olfactory receptor, family 6, subfamily V, member 1##NM_001001667|OR6V1|346517|olfactory receptor, family 6, subfamily V, member 1##BC010950|PIP|5304|prolactin-induced protein##AK312227|PIP|5304|prolactin-induced protein##BC010951|PIP|5304|prolactin-induced protein##NM_002652|PIP|5304|prolactin-induced protein##Y10179|PIP|5304|prolactin-induced protein##J03460|PIP|5304|prolactin-induced protein	1.46198	CTCF.p2:11:0.981	CTCF.p2:38:0.481
chr9	139652943	139653056	reg1025733.p2	5.559	+	BC130465 BC132714 AK126902 NM_178469 BC042109	-287	-	BC026910 AY301269 HQ257933 AY358598 AF303084 BC062746 NM_198946	-10058	-	TSC_hg19_v1_chr9_+_139640611 AK128864	-12388	+	BC093893 BC093895 AY358618 NM_203347	5962	-	TSC_hg19_v1_chr9_+_139685795 NM_032928 BC007834	32788	+	TSC_hg19_v1_chr9_+_139685818 CU675821	32835	+	BC130465|LCN8|138307|lipocalin 8##BC132714|LCN8|138307|lipocalin 8##AK126902|LCN8|138307|lipocalin 8##NM_178469|LCN8|138307|lipocalin 8##BC042109|LCN8|138307|lipocalin 8##AY301269|LCN6|158062|lipocalin 6##HQ257933|LCN6|158062|lipocalin 6##AY358598|LCN6|158062|lipocalin 6##AF303084|LCN6|158062|lipocalin 6##BC062746|LCN6|158062|lipocalin 6##NM_198946|LCN6|158062|lipocalin 6##AK128864|LOC100128593|100128593|uncharacterized LOC100128593##BC093893|LCN15|389812|lipocalin 15##BC093895|LCN15|389812|lipocalin 15##AY358618|LCN15|389812|lipocalin 15##NM_203347|LCN15|389812|lipocalin 15##NM_032928|TMEM141|85014|transmembrane protein 141##BC007834|TMEM141|85014|transmembrane protein 141	0.830432	CTCF.p2:4:0.830
chrX	113579421	113579524	reg1023776.p1	5.559	+	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	-1495410	-	AB384557 AY987378 NM_001113490	-1513119	-	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	-1656133	-	NM_000868 U49516 BC028688 AK295753 TSC_hg19_v1_chrX_+_113818558 M81778	239100	+	X95302 AK308523 GQ494004 U70981 AK291957 NM_000640 Y08768 AK309444	672702	-	NM_001145346 AK301904	844503	+	AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2##GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2##U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2##Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_001145346|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##AK301904|RBMXL3|139804|RNA binding motif protein, X-linked-like 3	0.894668	CTCF.p2:-18:0.895
chr10	94984282	94984385	reg1022654.p2	5.558	+	AK075374 NM_000783 AF005418	-150677	+	AK027560 NM_057157	-151102	+	AY356349 NM_183374	-163313	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	257715	-	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	272055	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	342176	+	AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1	0.055286	
chr12	3451360	3451468	reg1022864.p2	5.558	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-264852	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-382353	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-382820	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	149027	+	AK125333 TSC_hg19_v1_chr12_-_3601984	150571	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	410854	-	NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B	0.958088	CTCF.p2:0:0.958
chr12	80084456	80084559	reg1027231.p2	5.558	+	AB590922 CR536549 BC007018 TSC_hg19_v1_chr12_-_80084318	-292	-	CR627387 NM_001135806 AK308743	-645056	+	TSC_hg19_v1_chr12_+_79258794 BC058917	-825690	+	U63809 TSC_hg19_v1_chr12_-_80084784 NM_002583	258	-	AK302692 NM_001143886	223183	-	TSC_hg19_v1_chr12_-_80328878 BC062560 AY380574 BC111752 D87930 AK314193 NM_001244992 BC047898 BC000812	244293	-	CR536549|PAWR|5074|PRKC, apoptosis, WT1, regulator##BC007018|PAWR|5074|PRKC, apoptosis, WT1, regulator##CR627387|SYT1|6857|synaptotagmin I##NM_001135806|SYT1|6857|synaptotagmin I##AK308743|SYT1|6857|synaptotagmin I##BC058917|SYT1|6857|synaptotagmin I##U63809|PAWR|5074|PRKC, apoptosis, WT1, regulator##NM_002583|PAWR|5074|PRKC, apoptosis, WT1, regulator##AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC062560|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##AY380574|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC111752|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##D87930|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##AK314193|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001244992|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC047898|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC000812|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	0.0	
chr9	133576599	133576708	reg1024908.p1	5.558	+	TSC_hg19_v1_chr9_+_133569166 AK001916 AK296605 NM_014285 AK022460 AK090512 AK303163 BC000747 DQ892753 EU176744 AB463621	-7489	+	AY004252 NM_021619	-36673	+	TSC_hg19_v1_chr9_+_133455030 BC007874	-121628	+	NM_007313 AB209642 M14753	12666	+	TSC_hg19_v1_chr9_+_133710665 M30833 X16416	134014	+	TSC_hg19_v1_chr9_+_133710748 M14754 NM_005157	134135	+	AK001916|EXOSC2|23404|exosome component 2##AK296605|EXOSC2|23404|exosome component 2##NM_014285|EXOSC2|23404|exosome component 2##AK022460|EXOSC2|23404|exosome component 2##AK090512|EXOSC2|23404|exosome component 2##AK303163|EXOSC2|23404|exosome component 2##BC000747|EXOSC2|23404|exosome component 2##DQ892753|EXOSC2|23404|exosome component 2##EU176744|EXOSC2|23404|exosome component 2##AY004252|PRDM12|59335|PR domain containing 12##NM_021619|PRDM12|59335|PR domain containing 12##BC007874|FUBP3|8939|far upstream element (FUSE) binding protein 3##NM_007313|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##AB209642|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M14753|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M30833|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##X16416|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##M14754|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase##NM_005157|ABL1|25|c-abl oncogene 1, non-receptor tyrosine kinase	0.994389	CTCF.p2:-29:0.994
chr16	70464823	70464932	reg1020737.p3	5.557	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-84049	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-131729	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-131801	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	8104	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	23622	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	37963	+	AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##AK096727|FUK|197258|fucokinase	0.0	
chr5	35246645	35246761	reg1025908.p2	5.557	+	NM_000949	-15881	-	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	-16126	-	NM_001204314 NM_001204315 NM_001204316 NM_001204317 NM_001204318	-128480	-	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	371306	+	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	610330	+	NM_001042625 BC017586 NM_144647	692105	-	NM_000949|PRLR|5618|prolactin receptor##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##NM_001204314|PRLR|5618|prolactin receptor##NM_001204315|PRLR|5618|prolactin receptor##NM_001204316|PRLR|5618|prolactin receptor##NM_001204317|PRLR|5618|prolactin receptor##NM_001204318|PRLR|5618|prolactin receptor##BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like	0.774112	CTCF.p2:3:0.774
chr5	65467253	65467384	reg1028035.p1	5.557	+	BC067770 NM_139168	-26656	+	TSC_hg19_v1_chr5_+_65440162 AK308287 BC017000 AK091758 AX747166 BC047322	-27149	+	TSC_hg19_v1_chr5_+_65440053 NM_001077199	-27258	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	424890	+	AY830839 BC018692 NM_015183	657285	+	BC109069 BC109070 D83597 NM_005582 AK313177	1025282	-	BC067770|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_139168|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK308287|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC017000|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK091758|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC047322|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_001077199|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule	0.997137	CTCF.p2:1:0.997
chr10	111775887	111776019	reg1029667.p1	5.556	+	AK291488 TSC_hg19_v1_chr10_+_111767988 U37122 BC043143	-7986	+	TSC_hg19_v1_chr10_+_111767741 BX647403 NM_001121 NM_016824 BC062559 BX648016	-8224	+	NM_019903 AB209810 BC057285	-10172	+	TSC_hg19_v1_chr10_+_111967381 BC035128 NM_130439	191406	+	BC012907 NM_001008541	194035	+	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	209868	+	AK291488|ADD3|120|adducin 3 (gamma)##U37122|ADD3|120|adducin 3 (gamma)##BC043143|ADD3|120|adducin 3 (gamma)##BX647403|ADD3|120|adducin 3 (gamma)##NM_001121|ADD3|120|adducin 3 (gamma)##NM_016824|ADD3|120|adducin 3 (gamma)##BC062559|ADD3|120|adducin 3 (gamma)##BX648016|ADD3|120|adducin 3 (gamma)##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)##BC035128|MXI1|4601|MAX interactor 1##NM_130439|MXI1|4601|MAX interactor 1##BC012907|MXI1|4601|MAX interactor 1##NM_001008541|MXI1|4601|MAX interactor 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1	0.868277	CTCF.p2:4:0.868
chr1	145061911	145062055	reg1028200.p1	5.556	+	TSC_hg19_v1_chr1_-_145039957 AB007923 BC071648 AB042558 NM_001198832	-22166	-	NM_001195260	-64873	-	TSC_hg19_v1_chr1_-_144994947 NM_001002812 NM_014644 NM_001002810 NM_001198834 BC026270 NM_001195261	-66971	-	TSC_hg19_v1_chr1_-_145076026 CU692996 AF086451 BC110294 BC152553 BC025406 NM_022359	13927	-	TSC_hg19_v1_chr1_+_145096446 NM_004892 AK289875 BC001364 AF047442	34453	+	TSC_hg19_v1_chr1_+_145096519 CU674670 DQ892584 DQ895801	34549	+	AB007923|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001198832|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001195260|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001002812|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_014644|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001002810|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001198834|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001195261|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AF086451|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC152553|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC025406|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_022359|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_004892|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AK289875|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##BC001364|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AF047442|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##DQ892584|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##DQ895801|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)	0.240509	CTCF.p2:9:0.241
chr14	75762723	75762903	reg1003018.p1	5.556	+	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	-17231	+	TSC_hg19_v1_chr14_-_75643341 NM_006827	-119461	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	-119480	-	NM_001135047 TSC_hg19_v1_chr14_+_75894724	131828	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	132200	+	BC051303 NM_001135049	136023	+	NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##NM_006827|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2	0.0	
chr17	16487674	16487779	reg1025442.p1	5.556	+	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-15230	-	NM_001113567 NM_207387 TSC_hg19_v1_chr17_-_16395510	-92219	-	TSC_hg19_v1_chr17_-_16395091 AK093015 AX747857 BC144381	-92573	-	AK131401 NM_020787	69435	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	105878	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	387678	-	AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##NM_001113567|FAM211A|388341|family with sequence similarity 211, member A##NM_207387|FAM211A|388341|family with sequence similarity 211, member A##AK093015|FAM211A|388341|family with sequence similarity 211, member A##BC144381|FAM211A|388341|family with sequence similarity 211, member A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	0.179766	
chr21	46522678	46522802	reg1024885.p2	5.555	+	TSC_hg19_v1_chr21_+_46494502 AY082339 BC030663 NM_001112 NM_001160230 NM_015833 NM_015834 AB194369 AB194370 AB194371 AB194372 AB194373 AF525422 AF533142 AY135659 U76420 U76421 U76422 BC065545 U82120	-28157	+	TSC_hg19_v1_chr21_+_46359968 CU679303	-162771	+	TSC_hg19_v1_chr21_+_46359920 AF391113 AF391114 BC009341 NM_058190	-162815	+	TSC_hg19_v1_chr21_+_46572480 FJ169506	49758	+	TSC_hg19_v1_chr21_-_46707808 BC064623 AJ575591 AL110285 AB023175 AJ302079 AJ302080 AY066015 AK294966 AK290732 AK298080 NM_015227 NM_133635	185061	-	TSC_hg19_v1_chr21_+_46707955 BC022830 BC033767	185235	+	AY082339|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC030663|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001112|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001160230|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015833|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015834|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194369|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194370|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194371|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194372|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194373|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF525422|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF533142|ADARB1|104|adenosine deaminase, RNA-specific, B1##AY135659|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76420|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76421|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76422|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC065545|ADARB1|104|adenosine deaminase, RNA-specific, B1##U82120|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF391113|FAM207A|85395|family with sequence similarity 207, member A##AF391114|FAM207A|85395|family with sequence similarity 207, member A##BC009341|FAM207A|85395|family with sequence similarity 207, member A##NM_058190|FAM207A|85395|family with sequence similarity 207, member A##FJ169506|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC064623|POFUT2|23275|protein O-fucosyltransferase 2##AJ575591|POFUT2|23275|protein O-fucosyltransferase 2##AL110285|POFUT2|23275|protein O-fucosyltransferase 2##AB023175|POFUT2|23275|protein O-fucosyltransferase 2##AJ302079|POFUT2|23275|protein O-fucosyltransferase 2##AJ302080|POFUT2|23275|protein O-fucosyltransferase 2##AY066015|POFUT2|23275|protein O-fucosyltransferase 2##AK294966|POFUT2|23275|protein O-fucosyltransferase 2##AK290732|POFUT2|23275|protein O-fucosyltransferase 2##AK298080|POFUT2|23275|protein O-fucosyltransferase 2##NM_015227|POFUT2|23275|protein O-fucosyltransferase 2##NM_133635|POFUT2|23275|protein O-fucosyltransferase 2##BC022830|LOC642852|642852|uncharacterized LOC642852##BC033767|LOC642852|642852|uncharacterized LOC642852	0.300253	CTCF.p2:3:0.300
chr22	44391946	44392090	reg1021839.p1	5.555	+	TSC_hg19_v1_chr22_+_44351384 AY189688 AF151809 BC007830 AK222657 BC015200 AK297770 AK312773 CR456483 CU013033 CU013321 AB463278 DQ893124 DQ896401 CU677235	-40624	+	TSC_hg19_v1_chr22_+_44351321 AK001087	-40696	+	NM_015380 TSC_hg19_v1_chr22_+_44351285 BC011681	-40738	+	AF303887 NM_001003828	3072	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	28181	+	AK308443 NM_001243386	30165	+	AY189688|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AF151809|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC007830|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK222657|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC015200|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK297770|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK312773|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CR456483|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013033|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013321|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ893124|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ896401|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK001087|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##NM_015380|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC011681|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AF303887|PARVB|29780|parvin, beta##NM_001003828|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta	0.0	
chr6	149400663	149400795	reg1023786.p1	5.555	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-332520	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-736538	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-736739	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	238374	+	AK315038 NM_015093 AK307650	238712	+	AY340238 NM_001002255 BC130305 HQ258040	320779	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.953346	CTCF.p2:32:0.953
chr12	68552363	68552482	reg1020120.p2	5.554	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	-509799	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-888992	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-889250	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	1000	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	67130	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	94882	-	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22	0.106682	
chr13	21125105	21125275	reg1025408.p1	5.554	+	BC119660 BC119661 TSC_hg19_v1_chr13_-_21099959 AF160216 AF077049 AF087898 AK024041 BC071810 NM_015974	-25217	-	NM_001110219 NM_001110220 NM_001110221	-318657	-	NM_006783	-319819	-	NM_006531 NM_175605 U20362 TSC_hg19_v1_chr13_+_21141275 BC030776	16051	+	TSC_hg19_v1_chr13_+_21141298 AK300769 AK310223 AK308281 AK303853 BC059357	16116	+	TSC_hg19_v1_chr13_+_21183940 BC039413	58787	+	BC119660|CRYL1|51084|crystallin, lambda 1##BC119661|CRYL1|51084|crystallin, lambda 1##AF160216|CRYL1|51084|crystallin, lambda 1##AF077049|CRYL1|51084|crystallin, lambda 1##AF087898|CRYL1|51084|crystallin, lambda 1##AK024041|CRYL1|51084|crystallin, lambda 1##BC071810|CRYL1|51084|crystallin, lambda 1##NM_015974|CRYL1|51084|crystallin, lambda 1##NM_001110219|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110220|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110221|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006531|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##NM_175605|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##U20362|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC030776|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK300769|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK310223|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK308281|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK303853|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC059357|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)	0.998558	CTCF.p2:30:0.999
chr16	85855441	85855621	reg1000008.p2	5.554	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-22196	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-22226	+	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	-22298	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	77255	+	TSC_hg19_v1_chr16_-_86542463 AK091834	686933	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	688625	+	BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1	0.0	
chr17	27471070	27471178	reg1024139.p2	5.554	+	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	-3713	-	AK054958 NM_004740	-68498	-	TSC_hg19_v1_chr17_-_27401793 BC131561 BC047669	-69266	-	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	36226	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	102753	+	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	149986	-	AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC131561|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC047669|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2	0.0	
chr17	48556031	48556177	reg1018954.p1	5.554	+	CU690332 BC036360 AF371328 BC073974 NM_001267 TSC_hg19_v1_chr17_-_48546242 AK292177	-9884	-	AK311109 TSC_hg19_v1_chr17_+_48545703 AK308584	-10405	+	TSC_hg19_v1_chr17_+_48503610 AK024573 AK225044 AK225561 AK295258 AK300145 CU680180 CU680788	-52490	+	TSC_hg19_v1_chr17_+_48556216 AK002026 NM_018346 AK222472	94	+	TSC_hg19_v1_chr17_+_48556220 AK022105 AK293814 AK297655 BC050538	128	+	AK303041 NM_032133 TSC_hg19_v1_chr17_+_48585809 BC036358	29712	+	BC036360|CHAD|1101|chondroadherin##AF371328|CHAD|1101|chondroadherin##BC073974|CHAD|1101|chondroadherin##NM_001267|CHAD|1101|chondroadherin##AK292177|CHAD|1101|chondroadherin##AK308584|ACSF2|80221|acyl-CoA synthetase family member 2##AK024573|ACSF2|80221|acyl-CoA synthetase family member 2##AK225044|ACSF2|80221|acyl-CoA synthetase family member 2##AK225561|ACSF2|80221|acyl-CoA synthetase family member 2##AK295258|ACSF2|80221|acyl-CoA synthetase family member 2##AK300145|ACSF2|80221|acyl-CoA synthetase family member 2##AK002026|RSAD1|55316|radical S-adenosyl methionine domain containing 1##NM_018346|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK222472|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK022105|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK293814|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK297655|RSAD1|55316|radical S-adenosyl methionine domain containing 1##BC050538|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK303041|MYCBPAP|84073|MYCBP associated protein##NM_032133|MYCBPAP|84073|MYCBP associated protein##BC036358|MYCBPAP|84073|MYCBP associated protein	0.978348	CTCF.p2:3:0.978
chr8	28650996	28651101	reg1021775.p1	5.554	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	-91898	+	TSC_hg19_v1_chr8_+_28559032 AB011091	-91973	+	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	-299283	+	TSC_hg19_v1_chr8_-_28747454 BC016687 AK225072 AK304525 AK298468 NM_001172562 BC025267 AK300593 AK295977 AK001733 AK225530	96412	-	NM_001145159 NM_018250	96649	-	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	96869	+	AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3##AB011091|EXTL3|2137|exostoses (multiple)-like 3##NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##BC016687|INTS9|55756|integrator complex subunit 9##AK225072|INTS9|55756|integrator complex subunit 9##AK304525|INTS9|55756|integrator complex subunit 9##AK298468|INTS9|55756|integrator complex subunit 9##NM_001172562|INTS9|55756|integrator complex subunit 9##BC025267|INTS9|55756|integrator complex subunit 9##AK300593|INTS9|55756|integrator complex subunit 9##AK295977|INTS9|55756|integrator complex subunit 9##AK001733|INTS9|55756|integrator complex subunit 9##AK225530|INTS9|55756|integrator complex subunit 9##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1	0.0	
chr10	61382337	61382462	reg1005923.p3	5.553	+	AK299924 NM_001143773	-259739	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-260114	-	AL365474 NM_001143774 AM393181	-445111	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	87325	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	283802	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	283925	-	AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6	0.0	
chr10	75413698	75413794	reg1026033.p2	5.553	+	BC142635 BC131776 AK022983 NM_024875 TSC_hg19_v1_chr10_-_75410798	-2958	-	TSC_hg19_v1_chr10_-_75401524 AJ278124 BC025753 NM_021245	-12222	-	TSC_hg19_v1_chr10_-_75401273 AL359210 AF240633 AY013297 AK300683 AK308200	-12498	-	AK295873 TSC_hg19_v1_chr10_-_75415805 AK095931 AB188489 NM_001114133	2066	-	NM_001144000	43807	-	TSC_hg19_v1_chr10_-_75490231 BC020053 BC046139 BC063124 BC099910 AK294783	76498	-	BC142635|SYNPO2L|79933|synaptopodin 2-like##BC131776|SYNPO2L|79933|synaptopodin 2-like##AK022983|SYNPO2L|79933|synaptopodin 2-like##NM_024875|SYNPO2L|79933|synaptopodin 2-like##AJ278124|MYOZ1|58529|myozenin 1##BC025753|MYOZ1|58529|myozenin 1##NM_021245|MYOZ1|58529|myozenin 1##AL359210|MYOZ1|58529|myozenin 1##AF240633|MYOZ1|58529|myozenin 1##AY013297|MYOZ1|58529|myozenin 1##AK300683|MYOZ1|58529|myozenin 1##AK308200|MYOZ1|58529|myozenin 1##AK295873|SYNPO2L|79933|synaptopodin 2-like##AK095931|SYNPO2L|79933|synaptopodin 2-like##AB188489|SYNPO2L|79933|synaptopodin 2-like##NM_001114133|SYNPO2L|79933|synaptopodin 2-like##NM_001144000|AGAP5|729092|ArfGAP with GTPase domain, ankyrin repeat and PH domain 5##BC046139|BMS1P4|729096|BMS1 pseudogene 4##BC063124|BMS1P4|729096|BMS1 pseudogene 4##BC099910|BMS1P4|729096|BMS1 pseudogene 4##AK294783|BMS1P4|729096|BMS1 pseudogene 4	0.0	
chr10	99788090	99788173	reg1023076.p1	5.553	+	BC110810 NM_001010917	-178137	+	BC050435 AF117758 NM_003015	-256398	-	NM_001002261 AL834235	-289865	+	AK292084 AJ276171 TSC_hg19_v1_chr10_-_99790379	2231	-	AK057190 NM_001206528 NM_018058	2453	-	NM_014472 AK292546 TSC_hg19_v1_chr10_+_99894414	106266	+	BC110810|GOLGA7B|401647|golgin A7 family, member B##NM_001010917|GOLGA7B|401647|golgin A7 family, member B##BC050435|SFRP5|6425|secreted frizzled-related protein 5##AF117758|SFRP5|6425|secreted frizzled-related protein 5##NM_003015|SFRP5|6425|secreted frizzled-related protein 5##NM_001002261|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AL834235|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK292084|CRTAC1|55118|cartilage acidic protein 1##AJ276171|CRTAC1|55118|cartilage acidic protein 1##AK057190|CRTAC1|55118|cartilage acidic protein 1##NM_001206528|CRTAC1|55118|cartilage acidic protein 1##NM_018058|CRTAC1|55118|cartilage acidic protein 1##NM_014472|C10orf28|27291|chromosome 10 open reading frame 28##AK292546|C10orf28|27291|chromosome 10 open reading frame 28	1.056267	CTCF.p2:-6:1.000
chr20	62751610	62751744	reg1000835.p1	5.553	+	BC067481 BC067482 BC067483 CU688304 CU688306 NM_005286	-13494	-	BC038433 NM_001200019	-35309	+	BC036837 NM_001007125	-35966	-	TSC_hg19_v1_chr20_+_62795804 BC018917	44113	+	AB020642 NM_004535 TSC_hg19_v1_chr20_+_62795840	44156	+	TSC_hg19_v1_chr20_+_62887100 NM_001104925 NM_018257 BC040945 BC032332 AK001745 BC045775	135484	+	BC067481|NPBWR2|2832|neuropeptides B/W receptor 2##BC067482|NPBWR2|2832|neuropeptides B/W receptor 2##BC067483|NPBWR2|2832|neuropeptides B/W receptor 2##NM_005286|NPBWR2|2832|neuropeptides B/W receptor 2##BC038433|OPRL1|4987|opiate receptor-like 1##NM_001200019|OPRL1|4987|opiate receptor-like 1##BC036837|C20orf201|198437|chromosome 20 open reading frame 201##NM_001007125|C20orf201|198437|chromosome 20 open reading frame 201##BC018917|MYT1|4661|myelin transcription factor 1##AB020642|MYT1|4661|myelin transcription factor 1##NM_004535|MYT1|4661|myelin transcription factor 1##NM_001104925|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##NM_018257|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC040945|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC032332|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##AK001745|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC045775|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	0.0	
chrX	153601791	153601900	reg1019880.p1	5.553	+	TSC_hg19_v1_chrX_-_153599726 AB593010	-2123	-	TSC_hg19_v1_chrX_-_153599586 AB191259 AB371575 AB371577 AB371578 AB371579 AB191260 AB371574 AB371576 AB463042 AK090427	-2230	-	NM_001145934	-68437	+	X53416 TSC_hg19_v1_chrX_-_153602972	1105	-	TSC_hg19_v1_chrX_-_153603003 AK125630 GU727643 NM_001110556 NM_001456	1156	-	NM_000117 TSC_hg19_v1_chrX_+_153607623	5768	+	AB593010|FLNA|2316|filamin A, alpha##AB191259|FLNA|2316|filamin A, alpha##AB371575|FLNA|2316|filamin A, alpha##AB371577|FLNA|2316|filamin A, alpha##AB371578|FLNA|2316|filamin A, alpha##AB371579|FLNA|2316|filamin A, alpha##AB191260|FLNA|2316|filamin A, alpha##AB371574|FLNA|2316|filamin A, alpha##AB371576|FLNA|2316|filamin A, alpha##AK090427|FLNA|2316|filamin A, alpha##NM_001145934|TKTL1|8277|transketolase-like 1##X53416|FLNA|2316|filamin A, alpha##AK125630|FLNA|2316|filamin A, alpha##GU727643|FLNA|2316|filamin A, alpha##NM_001110556|FLNA|2316|filamin A, alpha##NM_001456|FLNA|2316|filamin A, alpha##NM_000117|EMD|2010|emerin	0.610289	CTCF.p2:-15:0.610
chr16	1756043	1756169	reg1024272.p1	5.552	+	TSC_hg19_v1_chr16_+_1728290 BC014438 AK296888 AK303927 AY598330 AK309930	-27800	+	BC060853 TSC_hg19_v1_chr16_+_1728289	-27820	+	AK309909 AK296998 NM_144570 TSC_hg19_v1_chr16_+_1728279 AK023154	-27838	+	TSC_hg19_v1_chr16_+_1756229 AB621811 AB028989 BC150266 NM_001040439 NM_015133 AK024437 BC137123 BC137124 BC144486 CR749696	164	+	TSC_hg19_v1_chr16_-_1821542 AK308663 AB528303 DQ892515 EU176697 U29656	65433	-	BC000250 NM_002513 TSC_hg19_v1_chr16_-_1821728	65633	-	BC014438|HN1L|90861|hematological and neurological expressed 1-like##AK296888|HN1L|90861|hematological and neurological expressed 1-like##AK303927|HN1L|90861|hematological and neurological expressed 1-like##AY598330|HN1L|90861|hematological and neurological expressed 1-like##AK309930|HN1L|90861|hematological and neurological expressed 1-like##BC060853|HN1L|90861|hematological and neurological expressed 1-like##AK309909|HN1L|90861|hematological and neurological expressed 1-like##AK296998|HN1L|90861|hematological and neurological expressed 1-like##NM_144570|HN1L|90861|hematological and neurological expressed 1-like##AK023154|HN1L|90861|hematological and neurological expressed 1-like##AB028989|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC150266|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##NM_001040439|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##NM_015133|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##AK024437|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC137123|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC137124|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC144486|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##CR749696|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##AK308663|NME3|4832|non-metastatic cells 3, protein expressed in##DQ892515|NME3|4832|non-metastatic cells 3, protein expressed in##EU176697|NME3|4832|non-metastatic cells 3, protein expressed in##U29656|NME3|4832|non-metastatic cells 3, protein expressed in##BC000250|NME3|4832|non-metastatic cells 3, protein expressed in##NM_002513|NME3|4832|non-metastatic cells 3, protein expressed in	0.950007	CTCF.p2:7:0.950
chr5	124238097	124238277	reg1022987.p1	5.552	+	BC131507 AB033107 BC151226 NM_020747	-157399	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1390305	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1479043	-	NM_001146319 AK316288 AK300154	1457627	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1520656	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	1521000	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.0	
chr7	99819046	99819226	reg1026293.p1	5.552	+	NM_024070	-2266	+	TSC_hg19_v1_chr7_+_99775540 NM_012447 AK292394 BC146806 AK302693 BC047490 BC028684 AL833816 BC140932	-43573	+	AJ007798 TSC_hg19_v1_chr7_+_99775380	-43772	+	BC065200 AK290510 TSC_hg19_v1_chr7_-_99869856 BC044886 BC090867 BC033723 BC053367 NM_178831	50694	-	BC056606 NM_001004351	86188	+	AB103084 TSC_hg19_v1_chr7_-_99933502 BC038996 D38435 D38499 BC110395 BC044214 BC067809	114405	-	NM_024070|PVRIG|79037|poliovirus receptor related immunoglobulin domain containing##NM_012447|STAG3|10734|stromal antigen 3##AK292394|STAG3|10734|stromal antigen 3##BC146806|STAG3|10734|stromal antigen 3##AK302693|STAG3|10734|stromal antigen 3##BC047490|STAG3|10734|stromal antigen 3##BC028684|STAG3|10734|stromal antigen 3##AL833816|STAG3|10734|stromal antigen 3##BC140932|STAG3|10734|stromal antigen 3##AJ007798|STAG3|10734|stromal antigen 3##BC065200|GATS|352954|GATS, stromal antigen 3 opposite strand##AK290510|GATS|352954|GATS, stromal antigen 3 opposite strand##BC044886|GATS|352954|GATS, stromal antigen 3 opposite strand##BC090867|GATS|352954|GATS, stromal antigen 3 opposite strand##BC033723|GATS|352954|GATS, stromal antigen 3 opposite strand##BC053367|GATS|352954|GATS, stromal antigen 3 opposite strand##NM_178831|GATS|352954|GATS, stromal antigen 3 opposite strand##BC056606|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)##NM_001004351|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)##BC038996|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38435|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38499|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC110395|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC044214|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC067809|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1	0.0	
chrX	2737659	2737815	reg1023671.p1	5.552	+	AK304164 NM_001141919 NM_001141920 NM_175569 AF380356 AF534880 BC100764 BC100765 BC100766 BC100767 Z48517 Z48518 Z48519	-67523	+	M16279 BC010109 NM_001122898 NM_002414 BC024310 X16996 BC002584 AK313617 BC003147 BC021620 AK309517 DQ891912 AB463475 CR450286 U82164	-128425	+	BC019696 CU689342 DQ891613 DQ894805 AJ293620 AY358849 BC032340 AB018328 NM_001171136 NM_004729 NM_145177	-318749	-	TSC_hg19_v1_chrX_+_2746813 NM_001079855 NM_001184702 NM_001184703 NM_001184704 NM_003918 U94362 AK098046 AK292496 U94363 BC023152	9165	+	AF160499 TSC_hg19_v1_chrX_-_2847338 AB590968 BC080179 BC020229	109594	-	TSC_hg19_v1_chrX_-_2847384 AK314479 AK021472 X83572 NM_001669	109651	-	AK304164|XG|7499|Xg blood group##NM_001141919|XG|7499|Xg blood group##NM_001141920|XG|7499|Xg blood group##NM_175569|XG|7499|Xg blood group##AF380356|XG|7499|Xg blood group##BC100764|XG|7499|Xg blood group##BC100765|XG|7499|Xg blood group##BC100766|XG|7499|Xg blood group##BC100767|XG|7499|Xg blood group##Z48517|XG|7499|Xg blood group##Z48518|XGPY2|100132596|Xg pseudogene, Y-linked 2##Z48519|XGPY2|100132596|Xg pseudogene, Y-linked 2##M16279|CD99|4267|CD99 molecule##BC010109|CD99|4267|CD99 molecule##NM_001122898|CD99|4267|CD99 molecule##NM_002414|CD99|4267|CD99 molecule##BC024310|CD99|4267|CD99 molecule##X16996|CD99|4267|CD99 molecule##BC002584|CD99|4267|CD99 molecule##AK313617|CD99|4267|CD99 molecule##BC003147|CD99|4267|CD99 molecule##BC021620|CD99|4267|CD99 molecule##DQ891912|CD99|4267|CD99 molecule##CR450286|CD99|4267|CD99 molecule##U82164|CD99|4267|CD99 molecule##BC019696|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ891613|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##DQ894805|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AJ293620|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AY358849|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##BC032340|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##AB018328|ZBED1|9189|zinc finger, BED-type containing 1##NM_001171136|ZBED1|9189|zinc finger, BED-type containing 1##NM_004729|ZBED1|9189|zinc finger, BED-type containing 1##NM_145177|DHRSX|207063|dehydrogenase/reductase (SDR family) X-linked##NM_001079855|GYG2|8908|glycogenin 2##NM_001184702|GYG2|8908|glycogenin 2##NM_001184703|GYG2|8908|glycogenin 2##NM_001184704|GYG2|8908|glycogenin 2##NM_003918|GYG2|8908|glycogenin 2##U94362|GYG2|8908|glycogenin 2##AK098046|GYG2|8908|glycogenin 2##AK292496|GYG2|8908|glycogenin 2##U94363|GYG2|8908|glycogenin 2##BC023152|GYG2|8908|glycogenin 2##AF160499|ARSD|414|arylsulfatase D##BC080179|ARSD|414|arylsulfatase D##BC020229|ARSD|414|arylsulfatase D##AK314479|ARSD|414|arylsulfatase D##AK021472|ARSD|414|arylsulfatase D##X83572|ARSD|414|arylsulfatase D##NM_001669|ARSD|414|arylsulfatase D	0.01449	
chr1	233595523	233595704	reg1020244.p2	5.551	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	-132030	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	-164130	-	TSC_hg19_v1_chr1_+_233086381 AF416713	-509224	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	154210	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	154306	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	444999	+	AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3	0.0	
chr1	243219805	243219898	reg1020994.p1	5.551	+	AK098092 NM_152666	-531854	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	-607081	-	BC132986 BC132988 AF276659 BC127722 NM_001004343	-1057477	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	198505	-	TSC_hg19_v1_chr1_-_243418566 AK310003 BC050722	198721	-	TSC_hg19_v1_chr1_-_243418675 NM_001042404 NM_001042405 NM_014812	198840	-	AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa##AK310003|CEP170|9859|centrosomal protein 170kDa##BC050722|CEP170|9859|centrosomal protein 170kDa##NM_001042404|CEP170|9859|centrosomal protein 170kDa##NM_001042405|CEP170|9859|centrosomal protein 170kDa##NM_014812|CEP170|9859|centrosomal protein 170kDa	1.038857	CTCF.p2:4:0.988
chr3	45951157	45951303	reg1025319.p1	5.551	+	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	-23175	+	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	-67635	-	TSC_hg19_v1_chr3_-_45838112 AF125107	-113082	-	NM_006564 Y13248	33742	+	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	86091	-	AB189434 AB189435 NM_001024644 NM_005283	117748	-	NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1	0.03952	
chr8	56186437	56186564	reg1027176.p1	5.551	+	BC106028 AY534241 NM_052898	-171486	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	-657848	+	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	-815984	+	AF286340 NM_024831	499245	+	AK308247 AK056932 NM_152417 BC020835 BC071636	499397	-	TSC_hg19_v1_chr8_+_56686028 AY028423 AK314693 BX648548 AF432215	499520	+	AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##AF286340|TGS1|96764|trimethylguanosine synthase 1##NM_024831|TGS1|96764|trimethylguanosine synthase 1##AK308247|TMEM68|137695|transmembrane protein 68##AK056932|TMEM68|137695|transmembrane protein 68##NM_152417|TMEM68|137695|transmembrane protein 68##BC020835|TMEM68|137695|transmembrane protein 68##BC071636|TMEM68|137695|transmembrane protein 68##AY028423|TGS1|96764|trimethylguanosine synthase 1##AK314693|TGS1|96764|trimethylguanosine synthase 1##BX648548|TGS1|96764|trimethylguanosine synthase 1##AF432215|TGS1|96764|trimethylguanosine synthase 1	0.859079	CTCF.p2:-7:0.859
chr18	12394563	12394652	reg1022736.p1	5.550	+	TSC_hg19_v1_chr18_-_12377251 BC024282 NM_006796	-17340	-	TSC_hg19_v1_chr18_-_12377199 Y18314 BC065016	-17419	-	TSC_hg19_v1_chr18_+_12308246 AK022340 AK098440 AK304616 BC002654 NM_032525 AK298196 BC039717 AB590145 DQ893486 DQ896394	-86342	+	NM_001142405 NM_006553 AK056046 BC106750 TSC_hg19_v1_chr18_+_12407941	13314	+	AK301711 NM_001128627	262123	-	BC115005 TSC_hg19_v1_chr18_-_12657786	263154	-	BC024282|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##NM_006796|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##Y18314|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##BC065016|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##AK022340|TUBB6|84617|tubulin, beta 6 class V##AK098440|TUBB6|84617|tubulin, beta 6 class V##AK304616|TUBB6|84617|tubulin, beta 6 class V##BC002654|TUBB6|84617|tubulin, beta 6 class V##NM_032525|TUBB6|84617|tubulin, beta 6 class V##AK298196|TUBB6|84617|tubulin, beta 6 class V##DQ893486|TUBB6|84617|tubulin, beta 6 class V##DQ896394|TUBB6|84617|tubulin, beta 6 class V##NM_001142405|SLMO1|10650|slowmo homolog 1 (Drosophila)##NM_006553|SLMO1|10650|slowmo homolog 1 (Drosophila)##AK056046|SLMO1|10650|slowmo homolog 1 (Drosophila)##BC106750|SLMO1|10650|slowmo homolog 1 (Drosophila)##AK301711|SPIRE1|56907|spire homolog 1 (Drosophila)##NM_001128627|SPIRE1|56907|spire homolog 1 (Drosophila)##BC115005|SPIRE1|56907|spire homolog 1 (Drosophila)	0.970849	CTCF.p2:6:0.971
chr1	113711878	113711944	reg1034334.p2	5.549	+	TSC_hg19_v1_chr1_+_113615865 BC117368 BC117370 AB527394	-95965	+	TSC_hg19_v1_chr1_+_113615809 AK291031 CR936669 AB018349 NM_014813 AL161998	-96096	+	TSC_hg19_v1_chr1_+_113499054 BC023568 BC047723 BC062295 BX648855	-212878	+	BC130409 BC144144 NM_001142782 NM_152900	221563	+	TSC_hg19_v1_chr1_-_114301772 NM_006608	589860	-	TSC_hg19_v1_chr1_-_114302096 BC002447	590229	-	BC117368|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC117370|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AK291031|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##CR936669|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AB018349|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##NM_014813|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AL161998|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC062295|LOC100506392|100506392|uncharacterized LOC100506392##BX648855|LOC100506392|100506392|uncharacterized LOC100506392##BC130409|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##BC144144|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_001142782|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_152900|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_006608|PHTF1|10745|putative homeodomain transcription factor 1##BC002447|PHTF1|10745|putative homeodomain transcription factor 1	0.0	
chr12	111137669	111137774	reg1024995.p1	5.549	+	AK293543 NM_001040107	-10122	-	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	-10763	-	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	-85796	+	L07395 AK297882 AB590512 EU831993 EU832086 TSC_hg19_v1_chr12_-_111180593	42825	-	TSC_hg19_v1_chr12_-_111180641 X74008 BC014073	42935	-	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	43035	-	AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##L07395|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK297882|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU831993|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU832086|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##X74008|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC014073|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme	1.048755	CTCF.p2:4:0.934
chr1	230245697	230245820	reg1023464.p1	5.549	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-42762	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-42816	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-483744	+	BC150638 NM_024554	267632	-	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	532438	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	532475	+	AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2	0.0	
chr15	31578244	31578425	reg1020856.p2	5.549	+	NM_001243538	-55285	-	GQ502181 HM135791 NM_001252020	-124906	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-184417	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	41004	+	AJ430383 NM_130901	369207	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	584495	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.0	
chr18	41201073	41201167	reg1022978.p1	5.549	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-343691	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-505551	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-1665887	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	1058994	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	1059748	+	NM_001242692 AK292422	1591832	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.913157	CTCF.p2:-23:0.913
chr22	35734098	35734223	reg1023229.p1	5.549	+	TSC_hg19_v1_chr22_+_35695886 AK097066 AK297827 AK295918 AK296670 AK314522 AK097926 CR456595 BC005144 BC040006 BC046151 AB463301 CU013195 CU013483 CU692314	-38264	+	TSC_hg19_v1_chr22_+_35695855 NM_001135730 NM_001135732 NM_005488 AK026576 AJ006973 AY358980	-38329	+	AK293694 NM_001135729	-38893	+	CR456505 NM_002133 TSC_hg19_v1_chr22_+_35777085 X06985	42908	+	TSC_hg19_v1_chr22_+_35777088 AK313120 BC001491 M23041 AB528477 BT019785 CR541945 CR541968 CU013103 CU013391 DQ892310 DQ895510 JF323038	42966	+	AF051791 TSC_hg19_v1_chr22_+_35779219	45002	+	AK097066|TOM1|10043|target of myb1 (chicken)##AK297827|TOM1|10043|target of myb1 (chicken)##AK295918|TOM1|10043|target of myb1 (chicken)##AK296670|TOM1|10043|target of myb1 (chicken)##AK314522|TOM1|10043|target of myb1 (chicken)##AK097926|TOM1|10043|target of myb1 (chicken)##CR456595|TOM1|10043|target of myb1 (chicken)##BC040006|TOM1|10043|target of myb1 (chicken)##BC046151|TOM1|10043|target of myb1 (chicken)##CU013195|TOM1|10043|target of myb1 (chicken)##CU013483|TOM1|10043|target of myb1 (chicken)##NM_001135730|TOM1|10043|target of myb1 (chicken)##NM_001135732|TOM1|10043|target of myb1 (chicken)##NM_005488|TOM1|10043|target of myb1 (chicken)##AK026576|TOM1|10043|target of myb1 (chicken)##AJ006973|TOM1|10043|target of myb1 (chicken)##AY358980|TOM1|10043|target of myb1 (chicken)##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)##CR456505|HMOX1|3162|heme oxygenase (decycling) 1##NM_002133|HMOX1|3162|heme oxygenase (decycling) 1##X06985|HMOX1|3162|heme oxygenase (decycling) 1##AK313120|HMOX1|3162|heme oxygenase (decycling) 1##BC001491|HMOX1|3162|heme oxygenase (decycling) 1##M23041|HMOX1|3162|heme oxygenase (decycling) 1##BT019785|HMOX1|3162|heme oxygenase (decycling) 1##CR541945|HMOX1|3162|heme oxygenase (decycling) 1##CR541968|HMOX1|3162|heme oxygenase (decycling) 1##CU013103|HMOX1|3162|heme oxygenase (decycling) 1##CU013391|HMOX1|3162|heme oxygenase (decycling) 1##DQ892310|HMOX1|3162|heme oxygenase (decycling) 1##DQ895510|HMOX1|3162|heme oxygenase (decycling) 1##JF323038|HMOX1|3162|heme oxygenase (decycling) 1##AF051791|HMOX1|3162|heme oxygenase (decycling) 1	0.371384	CTCF.p2:-7:0.371
chr3	4930973	4931121	reg1024978.p1	5.549	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-395851	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-395919	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-396016	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	90069	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	90134	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	90307	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.010466	
chr3	64516261	64516392	reg1029694.p1	5.549	+	BC119002 AL833539 NM_198859	-305206	-	AF530062 AB463196 TSC_hg19_v1_chr3_-_64009149 BC000630 AK095059 AY568086 D14663 NM_014814 BC012369 BC000904 AK290205 BX647742 AF215935	-507176	-	NM_001128149 AK310745 AK304062	-562869	+	AK057923 TSC_hg19_v1_chr3_+_64670789 BC040632	154465	+	AB037733 TSC_hg19_v1_chr3_-_64672299	155969	-	TSC_hg19_v1_chr3_-_64673334 AF261918 BC130578 BC171764 AF488803 NM_182920	157021	-	BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)##NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_001128149|ATXN7|6314|ataxin 7##AK310745|ATXN7|6314|ataxin 7##AK304062|ATXN7|6314|ataxin 7##AK057923|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##BC040632|ADAMTS9-AS2|100507098|ADAMTS9 antisense RNA 2 (non-protein coding)##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9	0.587418	CTCF.p2:-5:0.587
chr5	131997451	131997588	reg1026240.p2	5.549	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	-3629	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-104879	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	-118327	-	NM_000589 NM_172348	11853	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	75698	-	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	85625	+	BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A##AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2	0.0	
chr5	179554137	179554253	reg1025686.p1	5.549	+	TSC_hg19_v1_chr5_-_179499095 BC113864 BC114472 AB209800 AY083998 NM_018434 BC108306	-55130	-	AK313089 BC017100 TSC_hg19_v1_chr5_-_179498743 BC082267	-55504	-	TSC_hg19_v1_chr5_-_179334854 AB014576 BC129994 NM_015043 NM_198868	-219343	-	TSC_hg19_v1_chr5_-_179636160 NM_175062 BC036802	81981	-	TSC_hg19_v1_chr5_-_179718968 AK289638	164772	-	TSC_hg19_v1_chr5_-_179719061 NM_001135044 NM_002752 NM_139068 NM_139069 NM_139070	164881	-	BC113864|RNF130|55819|ring finger protein 130##BC114472|RNF130|55819|ring finger protein 130##AB209800|RNF130|55819|ring finger protein 130##AY083998|RNF130|55819|ring finger protein 130##NM_018434|RNF130|55819|ring finger protein 130##BC108306|RNF130|55819|ring finger protein 130##AK313089|RNF130|55819|ring finger protein 130##BC017100|RNF130|55819|ring finger protein 130##BC082267|RNF130|55819|ring finger protein 130##AB014576|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##BC129994|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_015043|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_198868|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_175062|RASGEF1C|255426|RasGEF domain family, member 1C##BC036802|RASGEF1C|255426|RasGEF domain family, member 1C##AK289638|MAPK9|5601|mitogen-activated protein kinase 9##NM_001135044|MAPK9|5601|mitogen-activated protein kinase 9##NM_002752|MAPK9|5601|mitogen-activated protein kinase 9##NM_139068|MAPK9|5601|mitogen-activated protein kinase 9##NM_139069|MAPK9|5601|mitogen-activated protein kinase 9##NM_139070|MAPK9|5601|mitogen-activated protein kinase 9	0.926075	CTCF.p2:25:0.926
chr6	153353544	153353648	reg1024117.p1	5.549	+	TSC_hg19_v1_chr6_-_153323873 AK297671 NM_001114184 NM_019041	-29699	-	TSC_hg19_v1_chr6_-_153323849 AK095240	-29738	-	TSC_hg19_v1_chr6_-_153323845 BC105973 BC011873	-29753	-	BC013117 NM_012419 AF202257 TSC_hg19_v1_chr6_-_153452453	98824	-	AB055767 TSC_hg19_v1_chr6_-_153603892	250295	-	DQ680044 NM_001145279 NM_001145280 EU340241 EU340242 EU340243 NM_001145281	978036	+	AK297671|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_001114184|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_019041|MTRF1L|54516|mitochondrial translational release factor 1-like##AK095240|MTRF1L|54516|mitochondrial translational release factor 1-like##BC105973|MTRF1L|54516|mitochondrial translational release factor 1-like##BC011873|MTRF1L|54516|mitochondrial translational release factor 1-like##BC013117|RGS17|26575|regulator of G-protein signaling 17##NM_012419|RGS17|26575|regulator of G-protein signaling 17##AF202257|RGS17|26575|regulator of G-protein signaling 17##DQ680044|OPRM1|4988|opioid receptor, mu 1##NM_001145279|OPRM1|4988|opioid receptor, mu 1##NM_001145280|OPRM1|4988|opioid receptor, mu 1##EU340241|OPRM1|4988|opioid receptor, mu 1##EU340242|OPRM1|4988|opioid receptor, mu 1##EU340243|OPRM1|4988|opioid receptor, mu 1##NM_001145281|OPRM1|4988|opioid receptor, mu 1	0.958625	CTCF.p2:19:0.959
chr1	26163892	26164019	reg1026143.p2	5.548	+	BC017175 NM_001099626 AY007100	-16600	+	TSC_hg19_v1_chr1_-_26147289 AK054768	-16648	-	TSC_hg19_v1_chr1_+_26146696 AL512766 NM_019557	-17290	+	AK024326 NM_024037 AK223419 BC000209 GQ844687	21919	-	BC034015 NM_178422	33788	-	NM_203401	68688	-	BC017175|FAM54B|56181|family with sequence similarity 54, member B##NM_001099626|FAM54B|56181|family with sequence similarity 54, member B##AY007100|FAM54B|56181|family with sequence similarity 54, member B##AK054768|LOC646471|646471|uncharacterized LOC646471##AL512766|FAM54B|56181|family with sequence similarity 54, member B##NM_019557|FAM54B|56181|family with sequence similarity 54, member B##AK024326|C1orf135|79000|chromosome 1 open reading frame 135##NM_024037|C1orf135|79000|chromosome 1 open reading frame 135##AK223419|C1orf135|79000|chromosome 1 open reading frame 135##BC000209|C1orf135|79000|chromosome 1 open reading frame 135##GQ844687|C1orf135|79000|chromosome 1 open reading frame 135##BC034015|PAQR7|164091|progestin and adipoQ receptor family member VII##NM_178422|PAQR7|164091|progestin and adipoQ receptor family member VII##NM_203401|STMN1|3925|stathmin 1	0.610083	CTCF.p2:-1:0.610
chr17	36886334	36886477	reg1024842.p2	5.548	+	TSC_hg19_v1_chr17_+_36861879 AK310435 AK310437 NM_005937 AB384930 CU687922 U07932 AB209633	-24515	+	TSC_hg19_v1_chr17_+_36861421 BC064612	-24806	+	TSC_hg19_v1_chr17_-_36831211 NM_001130677	-55220	-	TSC_hg19_v1_chr17_+_36886574 NM_001136498 AK097047 BC062294	227	+	TSC_hg19_v1_chr17_-_36904564 BC024255 NM_007144	18162	-	TSC_hg19_v1_chr17_-_36906030 BX647429	19644	-	AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##BC064612|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96##NM_001136498|CISD3|284106|CDGSH iron sulfur domain 3##AK097047|CISD3|284106|CDGSH iron sulfur domain 3##BC062294|CISD3|284106|CDGSH iron sulfur domain 3##BC024255|PCGF2|7703|polycomb group ring finger 2##NM_007144|PCGF2|7703|polycomb group ring finger 2##BX647429|PCGF2|7703|polycomb group ring finger 2	0.978394	CTCF.p2:-6:0.978
chr1	159391758	159391895	reg1025673.p1	5.547	+	AB529279 NM_001004467	-107378	-	NM_002001 X06948	-132323	+	NM_001122951 U01839	-216778	+	BC112290 BC112292 NM_012351 BC069150	17703	+	AB529280 NM_001004469 BC137025 BC137026	113992	-	BC007039 BC007058 BC070178 NM_001639 X04608 TSC_hg19_v1_chr1_+_159557615 AB587585 BT006750 CR450313 CU675509 M10944	165837	+	NM_001004467|OR10J3|441911|olfactory receptor, family 10, subfamily J, member 3##NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide##X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide##NM_001122951|DARC|2532|Duffy blood group, chemokine receptor##U01839|DARC|2532|Duffy blood group, chemokine receptor##BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##NM_001004469|OR10J5|127385|olfactory receptor, family 10, subfamily J, member 5##BC137025|OR10J5|127385|olfactory receptor, family 10, subfamily J, member 5##BC137026|OR10J5|127385|olfactory receptor, family 10, subfamily J, member 5##BC007039|APCS|325|amyloid P component, serum##BC007058|APCS|325|amyloid P component, serum##BC070178|APCS|325|amyloid P component, serum##NM_001639|APCS|325|amyloid P component, serum##X04608|APCS|325|amyloid P component, serum##BT006750|APCS|325|amyloid P component, serum##CR450313|APCS|325|amyloid P component, serum##M10944|APCS|325|amyloid P component, serum	0.73358	CTCF.p2:8:0.734
chr11	77125002	77125167	reg1026757.p1	5.547	+	TSC_hg19_v1_chr11_-_77122998 AK296006 AK055228	-2085	-	AY313782 AY326450 NM_182833	-126622	-	TSC_hg19_v1_chr11_+_76883833 BC023212	-241236	+	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	59748	-	BC040443 NM_173039 TSC_hg19_v1_chr11_+_77300718 AB028147	175616	+	AB590787 AF026003 BT019907 AF005422 BC119634 BC119635 TSC_hg19_v1_chr11_-_77348840 U53454 AK315259 X91788 NM_001293	223730	-	AK296006|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK055228|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##BC023212|MYO7A|4647|myosin VIIA##U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC040443|AQP11|282679|aquaporin 11##NM_173039|AQP11|282679|aquaporin 11##AB028147|AQP11|282679|aquaporin 11##AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	0.0	
chr8	101514942	101515122	reg1021962.p2	5.547	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-192747	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-192851	-	AB271913 AB271914 AB029316 NM_015435	-199561	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	56908	-	AK093906 AX748361 NM_152628	146860	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	218774	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr14	96518215	96518348	reg1026027.p1	5.546	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	-12635	+	AK023027 TSC_hg19_v1_chr14_+_96342762	-175536	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-337814	-	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	152796	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	152915	+	AK291970 AK309528 NM_000710 TSC_hg19_v1_chr14_+_96722546 U30271 AJ238044	204273	+	NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##AK023027|LOC100507043|100507043|uncharacterized LOC100507043##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2##AK291970|BDKRB1|623|bradykinin receptor B1##AK309528|BDKRB1|623|bradykinin receptor B1##NM_000710|BDKRB1|623|bradykinin receptor B1##U30271|BDKRB1|623|bradykinin receptor B1##AJ238044|BDKRB1|623|bradykinin receptor B1	0.99573	CTCF.p2:-2:0.996
chr1	57042893	57043044	reg1027716.p1	5.546	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-1361884	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-1361932	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-1537744	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	2051	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	2162	-	AK312439 TSC_hg19_v1_chr1_-_57045216	2249	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.0	
chr20	34156684	34156812	reg1026726.p1	5.546	+	TSC_hg19_v1_chr20_+_34129833 CU679479 CU680742 AF091085	-26903	+	AK074550 BC009765 TSC_hg19_v1_chr20_+_34129829 AK096484 AK300916	-26918	+	NM_015966 NM_198398 TSC_hg19_v1_chr20_+_34129827 AF308298 AF077030 AF151812 EF206690 BC014014	-26946	+	BC029951 AY461812 TSC_hg19_v1_chr20_-_34195432	38674	-	TSC_hg19_v1_chr20_+_34203752 AF262992 NM_003116 BC143783 AB464242	47087	+	NM_003915	85082	-	AF091085|ERGIC3|51614|ERGIC and golgi 3##AK074550|ERGIC3|51614|ERGIC and golgi 3##BC009765|ERGIC3|51614|ERGIC and golgi 3##AK096484|ERGIC3|51614|ERGIC and golgi 3##AK300916|ERGIC3|51614|ERGIC and golgi 3##NM_015966|ERGIC3|51614|ERGIC and golgi 3##NM_198398|ERGIC3|51614|ERGIC and golgi 3##AF308298|ERGIC3|51614|ERGIC and golgi 3##AF077030|ERGIC3|51614|ERGIC and golgi 3##AF151812|ERGIC3|51614|ERGIC and golgi 3##EF206690|ERGIC3|51614|ERGIC and golgi 3##BC014014|ERGIC3|51614|ERGIC and golgi 3##BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene##AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene##AF262992|SPAG4|6676|sperm associated antigen 4##NM_003116|SPAG4|6676|sperm associated antigen 4##BC143783|SPAG4|6676|sperm associated antigen 4##NM_003915|CPNE1|8904|copine I	0.0	
chr3	145439292	145439359	reg1039270.p1	5.545	+	NM_001134470 AK294020	-1747108	+	TSC_hg19_v1_chr3_+_143690915 BC037293	-1748335	+	NM_173552 AK315082	-1748673	+	AB527423 U84573 AK295084 TSC_hg19_v1_chr3_-_145878818	439482	-	TSC_hg19_v1_chr3_-_145878972 BC037169 AB209879	439631	-	TSC_hg19_v1_chr3_-_145879223 NM_000935 NM_182943	439926	-	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58##AK294020|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##U84573|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AK295084|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##BC037169|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AB209879|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_000935|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_182943|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2	0.0	
chr3	71975484	71975592	reg1024652.p1	5.545	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-141267	-	AK313656 NM_173359	-171615	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-172016	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	922010	-	BC017274 TSC_hg19_v1_chr3_-_72897575	922037	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	922054	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.922693	CTCF.p2:1:0.756
chr6	150282960	150283066	reg1026137.p1	5.545	+	AK299895 AB052906 NM_025217 TSC_hg19_v1_chr6_+_150263162 AX772820 BC034689 AY358665 AF304378 AY026825 CU689938	-19849	+	AY172580 BC096719 BC098152 AY172579 NM_001001788 AK310157	-38813	-	AY359075 NM_001243328	-65819	-	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	2149	+	BC131600 AB528849 AY039682 NM_130900	63620	-	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	107200	-	AK299895|ULBP2|80328|UL16 binding protein 2##AB052906|ULBP2|80328|UL16 binding protein 2##NM_025217|ULBP2|80328|UL16 binding protein 2##AX772820|ULBP2|80328|UL16 binding protein 2##BC034689|ULBP2|80328|UL16 binding protein 2##AY358665|ULBP2|80328|UL16 binding protein 2##AF304378|ULBP2|80328|UL16 binding protein 2##AY026825|ULBP2|80328|UL16 binding protein 2##AY172580|RAET1G|353091|retinoic acid early transcript 1G##BC096719|RAET1G|353091|retinoic acid early transcript 1G##BC098152|RAET1G|353091|retinoic acid early transcript 1G##AY172579|RAET1G|353091|retinoic acid early transcript 1G##NM_001001788|RAET1G|353091|retinoic acid early transcript 1G##AK310157|RAET1G|353091|retinoic acid early transcript 1G##AY359075|RAET1E|135250|retinoic acid early transcript 1E##NM_001243328|RAET1E|135250|retinoic acid early transcript 1E##AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L##AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3	0.296637	CTCF.p2:-2:0.297
chr6_dbb_hap3	3083391	3083523	reg1025682.p1	5.545	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.953188	CTCF.p2:35:0.953
chr8	126714899	126715043	reg1028682.p1	5.545	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-272392	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-610874	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-610914	-	TSC_hg19_v1_chr8_-_126963395 BX648371	248442	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	855584	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	855753	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.999324	CTCF.p2:0:0.999
chr10	98130430	98130600	reg1026451.p1	5.544	+	AF367761 NM_001040102 NM_001040103 NM_033207	-11441	-	NM_001017520 NM_004088 AB046378 AK313615 M26144 BC012920 AK223317 DQ891465 DQ894645	-66347	+	AM180327 AM180328 AM180329 AM180330 AM180331 AM180332 AM180333 AM180334 AM180335 AM180336 AM180337 AM180338 AM180339 AM180340 AM180341 AM180342 AM180343 AM180344 AM180345 AM180346 BC018906 BC110298 AK027779 AF068180 AF068181 AK225546 NM_001114094 NM_013314	-99272	-	AB384048 BC113577 BC112341 BC112366 AB023149 BC013871 BC030548 TSC_hg19_v1_chr10_-_98273674 AK026106 NM_012465	143048	-	AK075451 TSC_hg19_v1_chr10_-_98290333	159822	-	AK074824 TSC_hg19_v1_chr10_-_98321895	191345	-	AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal##NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal##AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal##AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal##M26144|DNTT|1791|deoxynucleotidyltransferase, terminal##BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal##AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal##AM180327|BLNK|29760|B-cell linker##AM180328|BLNK|29760|B-cell linker##AM180329|BLNK|29760|B-cell linker##AM180330|BLNK|29760|B-cell linker##AM180331|BLNK|29760|B-cell linker##AM180332|BLNK|29760|B-cell linker##AM180333|BLNK|29760|B-cell linker##AM180334|BLNK|29760|B-cell linker##AM180335|BLNK|29760|B-cell linker##AM180336|BLNK|29760|B-cell linker##AM180337|BLNK|29760|B-cell linker##AM180338|BLNK|29760|B-cell linker##AM180339|BLNK|29760|B-cell linker##AM180340|BLNK|29760|B-cell linker##AM180341|BLNK|29760|B-cell linker##AM180342|BLNK|29760|B-cell linker##AM180343|BLNK|29760|B-cell linker##AM180344|BLNK|29760|B-cell linker##AM180345|BLNK|29760|B-cell linker##AM180346|BLNK|29760|B-cell linker##BC018906|BLNK|29760|B-cell linker##BC110298|BLNK|29760|B-cell linker##AK027779|BLNK|29760|B-cell linker##AF068180|BLNK|29760|B-cell linker##AF068181|BLNK|29760|B-cell linker##AK225546|BLNK|29760|B-cell linker##NM_001114094|BLNK|29760|B-cell linker##NM_013314|BLNK|29760|B-cell linker##BC113577|TLL2|7093|tolloid-like 2##BC112341|TLL2|7093|tolloid-like 2##BC112366|TLL2|7093|tolloid-like 2##AB023149|TLL2|7093|tolloid-like 2##BC013871|TLL2|7093|tolloid-like 2##BC030548|TLL2|7093|tolloid-like 2##AK026106|TLL2|7093|tolloid-like 2##NM_012465|TLL2|7093|tolloid-like 2##AK075451|TM9SF3|56889|transmembrane 9 superfamily member 3##AK074824|TM9SF3|56889|transmembrane 9 superfamily member 3	0.580892	CTCF.p2:-1:0.581
chr11	114219077	114219183	reg1025647.p1	5.544	+	TSC_hg19_v1_chr11_+_114167214 AB590349 CR541907 DQ892841 DQ896088	-51893	+	AK026845 TSC_hg19_v1_chr11_+_114167171 U08021	-51958	+	NM_006169	-52596	+	CR457222 CU687142 BC071695 NM_019021 TSC_hg19_v1_chr11_-_114271225 BC009041 AK000017	52044	-	AK312619 TSC_hg19_v1_chr11_+_114271350 AK002015 AB209753 AK225667	52201	+	AF156098 TSC_hg19_v1_chr11_+_114271387 BC034381 NM_016090 AK225615 BC013320 BC070262 AB464181 CU689870	52272	+	CR541907|NNMT|4837|nicotinamide N-methyltransferase##DQ892841|NNMT|4837|nicotinamide N-methyltransferase##DQ896088|NNMT|4837|nicotinamide N-methyltransferase##AK026845|NNMT|4837|nicotinamide N-methyltransferase##U08021|NNMT|4837|nicotinamide N-methyltransferase##NM_006169|NNMT|4837|nicotinamide N-methyltransferase##CR457222|C11orf71|54494|chromosome 11 open reading frame 71##BC071695|C11orf71|54494|chromosome 11 open reading frame 71##NM_019021|C11orf71|54494|chromosome 11 open reading frame 71##BC009041|C11orf71|54494|chromosome 11 open reading frame 71##AK000017|C11orf71|54494|chromosome 11 open reading frame 71##AK312619|RBM7|10179|RNA binding motif protein 7##AK002015|RBM7|10179|RNA binding motif protein 7##AB209753|RBM7|10179|RNA binding motif protein 7##AK225667|RBM7|10179|RNA binding motif protein 7##AF156098|RBM7|10179|RNA binding motif protein 7##BC034381|RBM7|10179|RNA binding motif protein 7##NM_016090|RBM7|10179|RNA binding motif protein 7##AK225615|RBM7|10179|RNA binding motif protein 7##BC013320|RBM7|10179|RNA binding motif protein 7##BC070262|RBM7|10179|RNA binding motif protein 7	0.998633	CTCF.p2:-6:0.999
chr16	6131457	6131590	reg1023280.p1	5.544	+	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	-62298	+	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	-983755	-	NM_019109 TSC_hg19_v1_chr16_+_5121825 AK075373 BC031095 AB019038 BC004402 AK311475 CU678708 DQ895010 EU176309	-1009693	+	TSC_hg19_v1_chr16_+_6533765 BC033885	402252	+	AK001027 NM_001142334	692286	+	AF094849 AF109106 AF229057 NM_145891 NM_145892 NM_145893	1251227	+	AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##NM_019109|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK075373|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC031095|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AB019038|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC004402|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK311475|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##DQ895010|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##EU176309|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	0.489877	CTCF.p2:20:0.490
chr19	35909058	35909187	reg1021848.p1	5.544	+	AK290710 NM_005304 BC035657	-59628	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	-66672	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	-89031	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	31495	+	AM392574 AM392667 AM392672 AM392738 AM392847 AM392851 AM393397 AM393477 AY359007 HQ258707 BC130501 NM_001244847 NM_207392	72266	-	AY622964 AY789707 AF086315 AL832080 NM_001035516	83683	-	AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule##AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2##AM392574|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392667|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392672|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392738|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392847|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392851|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393397|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393477|KRTDAP|388533|keratinocyte differentiation-associated protein##AY359007|KRTDAP|388533|keratinocyte differentiation-associated protein##HQ258707|KRTDAP|388533|keratinocyte differentiation-associated protein##BC130501|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_001244847|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_207392|KRTDAP|388533|keratinocyte differentiation-associated protein##AY622964|DMKN|93099|dermokine##AY789707|DMKN|93099|dermokine##AF086315|DMKN|93099|dermokine##AL832080|DMKN|93099|dermokine##NM_001035516|DMKN|93099|dermokine	0.0	
chr2	11822301	11822424	reg1022440.p1	5.544	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-12071	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-139519	+	TSC_hg19_v1_chr2_+_11682798 BC071853	-139561	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	64413	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	1034891	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	1035554	+	AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	1.140657	CTCF.p2:-15:0.997
chr6	51406741	51406873	reg1021970.p1	5.544	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-620272	+	AY028376 NM_172238	-725551	+	DQ012016 NM_001037498	-1390444	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	545588	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	644399	+	AF384857 JF305974 AB590713 BC070124 NM_052872	702454	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.672852	CTCF.p2:73:0.673
chr1	108330034	108330155	reg1024769.p1	5.543	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	-98970	-	AB023193 TSC_hg19_v1_chr1_+_107683657	-646490	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-647352	+	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	177506	-	AJ619961 NM_213651 AK292567	405302	-	AF123303 EU832524 EU832606 AJ619987 TSC_hg19_v1_chr1_-_108742797 AK316506	412676	-	AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AF123303|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##EU832524|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##EU832606|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AJ619987|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK316506|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.0	
chr1	231558288	231558469	reg1025031.p1	5.543	+	TSC_hg19_v1_chr1_+_231473794 BC015740	-84591	+	NM_001010984 NM_032018 BC068478 TSC_hg19_v1_chr1_+_231473753	-84660	+	CU690194 AB587600 BC035763 TSC_hg19_v1_chr1_-_231473577 NM_175876 AK096460	-84824	-	AF229245 NM_022051	2411	-	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	106053	+	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	204177	+	BC015740|C1orf124|83932|chromosome 1 open reading frame 124##NM_001010984|C1orf124|83932|chromosome 1 open reading frame 124##NM_032018|C1orf124|83932|chromosome 1 open reading frame 124##BC068478|C1orf124|83932|chromosome 1 open reading frame 124##BC035763|EXOC8|149371|exocyst complex component 8##NM_175876|EXOC8|149371|exocyst complex component 8##AK096460|EXOC8|149371|exocyst complex component 8##AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)##NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)##FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1	0.37993	CTCF.p2:-28:0.380
chr14	97643502	97643612	reg1026036.p1	5.543	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-379842	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-674773	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-674811	+	AK098639 NM_182560	1534392	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	2094060	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	2094333	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.969624	CTCF.p2:-12:0.970
chr15	68608948	68609064	reg1026736.p2	5.543	+	TSC_hg19_v1_chr15_+_68570434 AK290167	-38582	+	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	-38913	+	CR457244 DQ891480 EU176598 BC013130 BC010849 TSC_hg19_v1_chr15_-_68522011 AK291175 AK293155 AK000568 AK027604 NM_017882	-87000	-	TSC_hg19_v1_chr15_-_68724505 AF109681 AF137378 NM_001004439 AK292445 AK304778 AK095863	115492	-	TSC_hg19_v1_chr15_+_68871402 NM_006091	262337	+	NM_001190456	299872	+	AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##CR457244|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##DQ891480|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##EU176598|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC013130|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC010849|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK291175|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK293155|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK000568|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK027604|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##NM_017882|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AF109681|ITGA11|22801|integrin, alpha 11##AF137378|ITGA11|22801|integrin, alpha 11##NM_001004439|ITGA11|22801|integrin, alpha 11##AK292445|ITGA11|22801|integrin, alpha 11##AK304778|ITGA11|22801|integrin, alpha 11##AK095863|ITGA11|22801|integrin, alpha 11##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B	0.759409	CTCF.p2:5:0.759
chr7	112929342	112929460	reg1025296.p1	5.543	+	TSC_hg19_v1_chr7_-_112758613 BC107860	-170772	-	TSC_hg19_v1_chr7_-_112758606 BC065765 BX537645	-170795	-	NM_001146265 NM_018970 TSC_hg19_v1_chr7_-_112727844	-201561	-	X78578 AF024579 HQ258594 BC070313 BC056666 NM_002711 BC126451 BC126453	629682	-	TSC_hg19_v1_chr7_+_113726381 AK131266	797020	+	TSC_hg19_v1_chr7_+_113726514 AF454830	797102	+	BC107860|LOC401397|401397|uncharacterized LOC401397##BC065765|LOC401397|401397|uncharacterized LOC401397##BX537645|LOC401397|401397|uncharacterized LOC401397##NM_001146265|GPR85|54329|G protein-coupled receptor 85##NM_018970|GPR85|54329|G protein-coupled receptor 85##X78578|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AF024579|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##HQ258594|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC070313|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC056666|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##NM_002711|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126451|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126453|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AK131266|FOXP2|93986|forkhead box P2##AF454830|FOXP2|93986|forkhead box P2	0.0	
chr10	81444999	81445089	reg1024937.p1	5.542	+	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	-74340	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	-124893	-	BC070048 NM_001099692	-172688	+	BC022318 NM_003019	263816	-	TSC_hg19_v1_chr10_+_81838420 AK222536 AK023325 BC022252 NM_025125 CR457310	393392	+	BC066348 BC090922 NM_001012973	447213	+	AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##BC022318|SFTPD|6441|surfactant protein D##NM_003019|SFTPD|6441|surfactant protein D##AK222536|FAM213A|80195|family with sequence similarity 213, member A##AK023325|FAM213A|80195|family with sequence similarity 213, member A##BC022252|FAM213A|80195|family with sequence similarity 213, member A##NM_025125|FAM213A|80195|family with sequence similarity 213, member A##CR457310|FAM213A|80195|family with sequence similarity 213, member A##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9	0.991943	CTCF.p2:9:0.992
chr11	26155708	26155835	reg1013902.p1	5.542	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-1637122	+	NM_001195637	-3273800	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-3304426	-	NM_031418 AK302659	197959	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	437969	-	BC049207 NM_178498	587788	-	AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	0.019157	
chr1	27147295	27147443	reg1025261.p1	5.542	+	AK000484 AK225521 AK301626 NM_001202554 AK056539	-32688	+	TSC_hg19_v1_chr1_+_27114455 NM_017837 BC013568	-32913	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	-46081	+	TSC_hg19_v1_chr1_+_27153178 BC066776 NM_032283	5828	+	BC023552 AF029082 NM_006142 TSC_hg19_v1_chr1_+_27189639 BC001550 BC000329 BC002995 BC000995 AB464718 M93010 DQ894162 CU674492 CR541905 CR541926	42296	+	CU675813 AY364261 TSC_hg19_v1_chr1_-_27216757 BC007815 BC008634 BC020272	69306	-	AK000484|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK225521|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK301626|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_001202554|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK056539|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_017837|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##BC013568|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##BC066776|ZDHHC18|84243|zinc finger, DHHC-type containing 18##NM_032283|ZDHHC18|84243|zinc finger, DHHC-type containing 18##BC023552|SFN|2810|stratifin##AF029082|SFN|2810|stratifin##NM_006142|SFN|2810|stratifin##BC001550|SFN|2810|stratifin##BC000329|SFN|2810|stratifin##BC002995|SFN|2810|stratifin##BC000995|SFN|2810|stratifin##M93010|SFN|2810|stratifin##DQ894162|SFN|2810|stratifin##CR541905|SFN|2810|stratifin##CR541926|SFN|2810|stratifin##AY364261|GPN2|54707|GPN-loop GTPase 2##BC007815|GPN2|54707|GPN-loop GTPase 2##BC008634|GPN2|54707|GPN-loop GTPase 2##BC020272|GPN2|54707|GPN-loop GTPase 2	0.21875	
chr13	29211977	29212090	reg1025809.p1	5.542	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	-142789	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	-499367	+	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	-537346	-	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	21175	+	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	21261	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	81022	-	BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3	0.091882	
chr3	124211754	124211889	reg1025596.p1	5.542	+	TSC_hg19_v1_chr3_+_124103674 AK131379	-108198	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-398216	+	AF303889 NM_017578	-501623	-	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	91707	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	237418	+	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	237495	+	AK131379|KALRN|8997|kalirin, RhoGEF kinase##AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase##AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase	0.999252	CTCF.p2:5:0.999
chr5	56391386	56391484	reg1026224.p1	5.542	+	TSC_hg19_v1_chr5_-_56247951 BX537798 BX640907 CR749246 CR749805 BX647359 BX648294 BC041348 NM_152622	-143491	-	NM_001171990 NM_153706 BC036528 AK309152	-186303	+	TSC_hg19_v1_chr5_+_56111395 AF042838	-280017	+	TSC_hg19_v1_chr5_+_56469684 AK311625 NM_001203246 NM_022913	78279	+	TSC_hg19_v1_chr5_+_56469911 AL161991 AY226828	78462	+	BC113004 NM_001127235	79838	+	BX537798|MIER3|166968|mesoderm induction early response 1, family member 3##BX640907|MIER3|166968|mesoderm induction early response 1, family member 3##CR749246|MIER3|166968|mesoderm induction early response 1, family member 3##CR749805|MIER3|166968|mesoderm induction early response 1, family member 3##BX647359|MIER3|166968|mesoderm induction early response 1, family member 3##BX648294|MIER3|166968|mesoderm induction early response 1, family member 3##BC041348|MIER3|166968|mesoderm induction early response 1, family member 3##NM_152622|MIER3|166968|mesoderm induction early response 1, family member 3##NM_001171990|C5orf35|133383|chromosome 5 open reading frame 35##NM_153706|C5orf35|133383|chromosome 5 open reading frame 35##BC036528|C5orf35|133383|chromosome 5 open reading frame 35##AK309152|C5orf35|133383|chromosome 5 open reading frame 35##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK311625|GPBP1|65056|GC-rich promoter binding protein 1##NM_001203246|GPBP1|65056|GC-rich promoter binding protein 1##NM_022913|GPBP1|65056|GC-rich promoter binding protein 1##AL161991|GPBP1|65056|GC-rich promoter binding protein 1##AY226828|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1	0.869231	CTCF.p2:2:0.869
chr1	204760998	204761140	reg1026408.p1	5.541	+	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	-106478	-	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	-275459	+	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	-275567	+	TSC_hg19_v1_chr1_+_204797779 BC040674 NM_001005388 NM_001005389 NM_001160332 NM_001160333 NM_015090 AK295291 AK299262 AK090639 AX746553	36743	+	TSC_hg19_v1_chr1_+_204839989 AK308686	78914	+	NM_001160331 BC137013 BC144454 BC144455 AB384522	152329	+	AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2##AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC040674|NFASC|23114|neurofascin##NM_001005388|NFASC|23114|neurofascin##NM_001005389|NFASC|23114|neurofascin##NM_001160332|NFASC|23114|neurofascin##NM_001160333|NFASC|23114|neurofascin##NM_015090|NFASC|23114|neurofascin##AK295291|NFASC|23114|neurofascin##AK299262|NFASC|23114|neurofascin##AK090639|NFASC|23114|neurofascin##AK308686|NFASC|23114|neurofascin##NM_001160331|NFASC|23114|neurofascin##BC137013|NFASC|23114|neurofascin##BC144454|NFASC|23114|neurofascin##BC144455|NFASC|23114|neurofascin	0.963112	CTCF.p2:15:0.963
chr2	41724161	41724300	reg1025193.p1	5.541	+	Y12878 Y12885 AK291696 BX537482 NM_001112802	-984658	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	-1045008	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-1066799	-	AK124893 NM_001242815	456712	-	TSC_hg19_v1_chr2_+_42275160 NM_138370	550902	+	AB528999 TSC_hg19_v1_chr2_+_42275979	551731	+	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)	0.962372	CTCF.p2:13:0.962
chr7	102251498	102251608	reg1025791.p1	5.541	+	AF468111 BC110985 TSC_hg19_v1_chr7_-_102213031 AB209398 BC141857 AK309487 NM_001097615	-38513	-	AJ277739 AJ277740 AJ277741 AB384935 BC056864 BC071870 TSC_hg19_v1_chr7_-_102212997 BC044209 BC050598	-38566	-	AK302217 NM_001031618 NM_001166339	-59875	+	HQ258652 BC110873 TSC_hg19_v1_chr7_-_102257170 AB011110 BC113663 BC143584 BC143585 AK308653	5604	-	TSC_hg19_v1_chr7_-_102257205 AK026441 AK310176 NM_001079877 NM_006989 AY029206	5671	-	EU341824 NM_001114403 AK296589	31723	-	AF468111|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AB209398|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_001097615|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277739|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AJ277740|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277741|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##HQ258652|RASA4|10156|RAS p21 protein activator 4##BC110873|RASA4|10156|RAS p21 protein activator 4##AB011110|RASA4|10156|RAS p21 protein activator 4##BC113663|RASA4|10156|RAS p21 protein activator 4##BC143584|RASA4|10156|RAS p21 protein activator 4##BC143585|RASA4|10156|RAS p21 protein activator 4##AK308653|RASA4|10156|RAS p21 protein activator 4##AK026441|RASA4|10156|RAS p21 protein activator 4##AK310176|RASA4|10156|RAS p21 protein activator 4##NM_001079877|RASA4|10156|RAS p21 protein activator 4##NM_006989|RASA4|10156|RAS p21 protein activator 4##EU341824|UPK3BL|100134938|uroplakin 3B-like##NM_001114403|UPK3BL|100134938|uroplakin 3B-like	0.0	
chr7	140931431	140931538	reg1023877.p2	5.541	+	NM_001195278	-157453	+	NM_053035 TSC_hg19_v1_chr7_-_140714792	-216698	-	TSC_hg19_v1_chr7_-_140714748 AF078858 BC105793	-216734	-	NM_018238 TSC_hg19_v1_chr7_+_141251215 AK304502 AK001704 AK299131 AK222769 AJ278150 BC009775	319673	+	TSC_hg19_v1_chr7_-_141401967 AB032973 NM_001080392 AB384573	470450	-	AK131218 NM_001105558	476668	+	NM_001195278|LOC100507421|100507421|transmembrane protein 178-like##NM_053035|MRPS33|51650|mitochondrial ribosomal protein S33##AF078858|MRPS33|51650|mitochondrial ribosomal protein S33##BC105793|MRPS33|51650|mitochondrial ribosomal protein S33##NM_018238|AGK|55750|acylglycerol kinase##AK304502|AGK|55750|acylglycerol kinase##AK001704|AGK|55750|acylglycerol kinase##AK299131|AGK|55750|acylglycerol kinase##AK222769|AGK|55750|acylglycerol kinase##AJ278150|AGK|55750|acylglycerol kinase##BC009775|AGK|55750|acylglycerol kinase##AB032973|KIAA1147|57189|KIAA1147##NM_001080392|KIAA1147|57189|KIAA1147##AK131218|WEE2|494551|WEE1 homolog 2 (S. pombe)##NM_001105558|WEE2|494551|WEE1 homolog 2 (S. pombe)	0.748752	CTCF.p2:17:0.749
chr12	8690539	8690660	reg1026310.p1	5.540	+	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	-24368	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	-81997	+	BC042608 AK001270 NM_018088	-310396	-	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	2875	-	AB040431 BC006296 NM_020661	74840	-	TSC_hg19_v1_chr12_-_8815272 AK315807 BC005901 AK290585 AK299475	124697	-	BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##BC042608|FAM90A1|55138|family with sequence similarity 90, member A1##AK001270|FAM90A1|55138|family with sequence similarity 90, member A1##NM_018088|FAM90A1|55138|family with sequence similarity 90, member A1##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E##AB040431|AICDA|57379|activation-induced cytidine deaminase##BC006296|AICDA|57379|activation-induced cytidine deaminase##NM_020661|AICDA|57379|activation-induced cytidine deaminase##AK315807|MFAP5|8076|microfibrillar associated protein 5##BC005901|MFAP5|8076|microfibrillar associated protein 5##AK290585|MFAP5|8076|microfibrillar associated protein 5##AK299475|MFAP5|8076|microfibrillar associated protein 5	0.830069	CTCF.p2:-14:0.830
chr16	18548412	18548531	reg1026082.p1	5.540	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	-983666	-	TSC_hg19_v1_chr16_+_16326508 AB463143	-2221941	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-2221983	+	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	24920	-	TSC_hg19_v1_chr16_-_18798077 AK127316	249625	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	253184	-	AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a	1.032216	CTCF.p2:29:0.972
chr17	41426624	41426733	reg1025829.p2	5.540	+	TSC_hg19_v1_chr17_+_41363905 AK056132 AK290387 AK299974 AK301571 NM_145041	-62799	+	TSC_hg19_v1_chr17_+_41323230 AK299328 AK290005 AK297425 BC012591 X76952 NM_005899 BC009808 AY450308	-103456	+	TSC_hg19_v1_chr17_+_41322538 D30756 NM_031862 AF227189 NM_031858	-104185	+	AL832479 TSC_hg19_v1_chr17_-_41465694 AK123585 AK311685	39012	-	TSC_hg19_v1_chr17_+_41476360 NM_001661 AK314951 BC000043 AB060692 L38490	49689	+	AK294046 TSC_hg19_v1_chr17_+_41561351 BC020697 AK303319 D50487 NM_004941 AK291664	134619	+	AK056132|TMEM106A|113277|transmembrane protein 106A##AK290387|TMEM106A|113277|transmembrane protein 106A##AK299974|TMEM106A|113277|transmembrane protein 106A##AK301571|TMEM106A|113277|transmembrane protein 106A##NM_145041|TMEM106A|113277|transmembrane protein 106A##AK299328|NBR1|4077|neighbor of BRCA1 gene 1##AK290005|NBR1|4077|neighbor of BRCA1 gene 1##AK297425|NBR1|4077|neighbor of BRCA1 gene 1##X76952|NBR1|4077|neighbor of BRCA1 gene 1##NM_005899|NBR1|4077|neighbor of BRCA1 gene 1##BC009808|NBR1|4077|neighbor of BRCA1 gene 1##AY450308|NBR1|4077|neighbor of BRCA1 gene 1##D30756|NBR1|4077|neighbor of BRCA1 gene 1##NM_031862|NBR1|4077|neighbor of BRCA1 gene 1##AF227189|NBR1|4077|neighbor of BRCA1 gene 1##NM_031858|NBR1|4077|neighbor of BRCA1 gene 1##AL832479|LOC100130581|100130581|uncharacterized LOC100130581##AK123585|LOC100130581|100130581|uncharacterized LOC100130581##AK311685|LOC100130581|100130581|uncharacterized LOC100130581##NM_001661|ARL4D|379|ADP-ribosylation factor-like 4D##AK314951|ARL4D|379|ADP-ribosylation factor-like 4D##BC000043|ARL4D|379|ADP-ribosylation factor-like 4D##AB060692|ARL4D|379|ADP-ribosylation factor-like 4D##L38490|ARL4D|379|ADP-ribosylation factor-like 4D##AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	0.830069	CTCF.p2:11:0.830
chr17	74790000	74790139	reg1026261.p1	5.540	+	TSC_hg19_v1_chr17_+_74734111 AK308058 AF015184 AK000233	-55916	+	AF015183 NM_001242532 NM_001242533 NM_001242535 NM_001242536 NM_001242537 NM_024311	-56544	+	TSC_hg19_v1_chr17_-_74733465 AK124792 NM_001195427 NM_003016	-56613	-	TSC_hg19_v1_chr17_+_74864556 AK057861 AB235153 BC041577 NM_001199172 NM_144677 BC062354	74597	+	AB114297 NM_198955 BC144361	78691	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	294728	+	AK308058|MFSD11|79157|major facilitator superfamily domain containing 11##AF015184|MFSD11|79157|major facilitator superfamily domain containing 11##AK000233|MFSD11|79157|major facilitator superfamily domain containing 11##AF015183|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242532|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242533|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242535|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242536|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242537|MFSD11|79157|major facilitator superfamily domain containing 11##NM_024311|MFSD11|79157|major facilitator superfamily domain containing 11##AK124792|SRSF2|6427|serine/arginine-rich splicing factor 2##NM_001195427|SRSF2|6427|serine/arginine-rich splicing factor 2##NM_003016|SRSF2|6427|serine/arginine-rich splicing factor 2##AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338	0.746207	CTCF.p2:-15:0.746
chr3	13271253	13271370	reg1025297.p1	5.540	+	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	-156713	-	TSC_hg19_v1_chr3_-_13057189 BC071805	-214093	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	-262203	-	AB020713 TSC_hg19_v1_chr3_-_13384784	113454	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	190421	-	TSC_hg19_v1_chr3_-_13461832 BC020573 NM_024923	190506	-	AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##AB020713|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa##BC020573|NUP210|23225|nucleoporin 210kDa##NM_024923|NUP210|23225|nucleoporin 210kDa	1.071956	CTCF.p2:-10:0.372	CTCF.p2:-82:0.700
chr4	163786447	163786549	reg1026531.p1	5.540	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	-701347	-	AK294459 NM_014247	-3597501	+	AK058100 NM_152543	-3830166	-	TSC_hg19_v1_chr4_-_164088002 AK097352	301494	-	TSC_hg19_v1_chr4_-_164088043 AK308601	301539	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	301580	-	AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.869245	CTCF.p2:-14:0.869
chr6	69023935	69024056	reg1025612.p2	5.540	+	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	-424967	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	-2606902	-	AY358133 NM_198283 AK310478	-2734290	-	AL833240 TSC_hg19_v1_chr6_-_69345026	320977	-	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	321406	+	TSC_hg19_v1_chr6_-_70506472 AB074281	1482482	-	AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3##AB074281|LMBRD1|55788|LMBR1 domain containing 1	0.0	
chr9	1620037	1620156	reg1027244.p1	5.540	+	AF130729 NM_181872	-569487	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-569726	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-569752	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	395200	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	1001711	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	1001978	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.870793	CTCF.p2:6:0.871
chr8	11364510	11364691	reg1024805.p2	5.539	+	S76617 NM_001715 BC018703 BC004473 BC038555	-13007	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-40371	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-159596	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	197120	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	262668	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	295584	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.157134	
chr1	31635682	31635796	reg1022392.p1	5.538	+	BX647437 TSC_hg19_v1_chr1_-_31538801	-96956	-	TSC_hg19_v1_chr1_-_31538565 GQ334687 GQ334688 NM_001020658 NM_014676 AK294477	-97147	-	TSC_hg19_v1_chr1_-_31538543 BC013398 D43951 AK291779 AK300457 AF315592 AK096476 AK222605	-97222	-	AK299507 TSC_hg19_v1_chr1_-_31712475	76701	-	NM_024522 TSC_hg19_v1_chr1_-_31712735	76996	-	DQ893627 DQ895442 TSC_hg19_v1_chr1_-_31769633 AK313800 AF090988 AK074516 EF011621 BC001494 NM_004814 AK298823	133891	-	BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)##NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)##NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)##AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)##BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)##D43951|PUM1|9698|pumilio homolog 1 (Drosophila)##AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)##AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)##AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)##AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)##AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)##AK299507|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1##NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1##DQ893627|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##DQ895442|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK313800|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AF090988|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK074516|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##EF011621|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##BC001494|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##NM_004814|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK298823|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)	0.961351	CTCF.p2:-36:0.961
chr19	50416700	50416827	reg1025690.p1	5.538	+	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	-3661	-	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	-16610	-	TSC_hg19_v1_chr19_+_50381392 AK090606 AX746531	-35305	+	NM_012068 AK290592	15225	+	NM_001193646 AK091985 AB021663 AK024402 TSC_hg19_v1_chr19_+_50432461 AB073613 BC005174	15671	+	AJ880387 TSC_hg19_v1_chr19_-_50432664 AJ880386	15894	-	CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##AK090606|TBC1D17|79735|TBC1 domain family, member 17##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5##NM_001193646|ATF5|22809|activating transcription factor 5##AK091985|ATF5|22809|activating transcription factor 5##AB021663|ATF5|22809|activating transcription factor 5##AK024402|ATF5|22809|activating transcription factor 5##AB073613|ATF5|22809|activating transcription factor 5##BC005174|ATF5|22809|activating transcription factor 5##AJ880387|IL4I1|259307|interleukin 4 induced 1##AJ880386|IL4I1|259307|interleukin 4 induced 1	0.0	
chr6	151762198	151762334	reg1028349.p1	5.538	+	TSC_hg19_v1_chr6_-_151712650 BC020172 NM_020861 AK092886 AX747790 AK291942	-49556	-	TSC_hg19_v1_chr6_+_151646810 NM_144497 AK307739 BC070151 AB003476 BC117679 BC117680	-115489	+	TSC_hg19_v1_chr6_+_151561677 BC000188 BC022814 BC015830 AB384670 AF001504	-200528	+	TSC_hg19_v1_chr6_-_151773262 BC119683 AK000634 BC106065 AK292339 NM_017909	10992	-	AK022972 NM_024573	11155	+	AK298490 TSC_hg19_v1_chr6_+_151773653 AK310840 AL110241 BC011348 CU679902	11376	+	BC020172|ZBTB2|57621|zinc finger and BTB domain containing 2##NM_020861|ZBTB2|57621|zinc finger and BTB domain containing 2##AK092886|ZBTB2|57621|zinc finger and BTB domain containing 2##AK291942|ZBTB2|57621|zinc finger and BTB domain containing 2##NM_144497|AKAP12|9590|A kinase (PRKA) anchor protein 12##AK307739|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC070151|AKAP12|9590|A kinase (PRKA) anchor protein 12##AB003476|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC117679|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC117680|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC000188|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC022814|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC015830|AKAP12|9590|A kinase (PRKA) anchor protein 12##AF001504|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC119683|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK000634|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##BC106065|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK292339|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##NM_017909|RMND1|55005|required for meiotic nuclear division 1 homolog (S. cerevisiae)##AK022972|C6orf211|79624|chromosome 6 open reading frame 211##NM_024573|C6orf211|79624|chromosome 6 open reading frame 211##AK298490|C6orf211|79624|chromosome 6 open reading frame 211##AK310840|C6orf211|79624|chromosome 6 open reading frame 211##AL110241|C6orf211|79624|chromosome 6 open reading frame 211##BC011348|C6orf211|79624|chromosome 6 open reading frame 211	0.773388	CTCF.p2:0:0.773
chrX	106034897	106034990	reg1024223.p2	5.538	+	TSC_hg19_v1_chrX_+_105969932 AK074264 NM_194463 BC063404 AF394689 CU687692	-64935	+	BC036901 NM_024539 AK126553	-97868	+	NM_001184782 NM_018015 TSC_hg19_v1_chrX_+_105855208 BC047503 AK001040 BC070110 AK291730 BC011483 BC033709 BC054032 CU687040 CU689708	-179709	+	TSC_hg19_v1_chrX_+_106045925 AK123957 NM_017752 NM_198881 BC122564 BX648230 AB449890 AB449891	11038	+	AF177340 NM_001171092	108450	+	BC007652 BC101998 BC105691 BC105692 BC110436 BC127250 NM_001171706 NM_138382	111610	-	AK074264|RNF128|79589|ring finger protein 128##NM_194463|RNF128|79589|ring finger protein 128##BC063404|RNF128|79589|ring finger protein 128##AF394689|RNF128|79589|ring finger protein 128##BC036901|RNF128|79589|ring finger protein 128##NM_024539|RNF128|79589|ring finger protein 128##AK126553|RNF128|79589|ring finger protein 128##NM_001184782|CXorf57|55086|chromosome X open reading frame 57##NM_018015|CXorf57|55086|chromosome X open reading frame 57##BC047503|CXorf57|55086|chromosome X open reading frame 57##AK001040|CXorf57|55086|chromosome X open reading frame 57##BC070110|CXorf57|55086|chromosome X open reading frame 57##AK291730|CXorf57|55086|chromosome X open reading frame 57##BC011483|CXorf57|55086|chromosome X open reading frame 57##BC033709|CXorf57|55086|chromosome X open reading frame 57##BC054032|CXorf57|55086|chromosome X open reading frame 57##AK123957|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_017752|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_198881|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BC122564|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BX648230|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449890|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449891|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AF177340|CLDN2|9075|claudin 2##NM_001171092|CLDN2|9075|claudin 2##BC007652|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC101998|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC105691|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC105692|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC110436|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC127250|RIPPLY1|92129|ripply1 homolog (zebrafish)##NM_001171706|RIPPLY1|92129|ripply1 homolog (zebrafish)##NM_138382|RIPPLY1|92129|ripply1 homolog (zebrafish)	0.820884	CTCF.p2:-5:0.821
chr16	11891101	11891198	reg1021852.p1	5.537	+	TSC_hg19_v1_chr16_-_11891103 NM_014153	-34	-	BC046363 BC036857 TSC_hg19_v1_chr16_-_11891096 AK091803 AX747194	-98	-	TSC_hg19_v1_chr16_-_11836686 AK297094 BX648407 AK027646 NM_015914 BC002856 BC018635	-54493	-	AY598331 HQ258262 HQ258426 AJ007398 BC019069 TSC_hg19_v1_chr16_-_11945392 AK000822 BC009802 BC017899 BC107782 BC070325 AY154473 BC112228 BC113699 BC016362 AL049999 AK295935 NM_015659	54255	-	TSC_hg19_v1_chr16_-_12009569 AB590486	118454	-	BC009503 TSC_hg19_v1_chr16_-_12009763 AK095483	118599	-	NM_014153|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC046363|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC036857|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK091803|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK297094|TXNDC11|51061|thioredoxin domain containing 11##BX648407|TXNDC11|51061|thioredoxin domain containing 11##AK027646|TXNDC11|51061|thioredoxin domain containing 11##NM_015914|TXNDC11|51061|thioredoxin domain containing 11##BC002856|TXNDC11|51061|thioredoxin domain containing 11##BC018635|TXNDC11|51061|thioredoxin domain containing 11##AY598331|RSL1D1|26156|ribosomal L1 domain containing 1##HQ258262|RSL1D1|26156|ribosomal L1 domain containing 1##HQ258426|RSL1D1|26156|ribosomal L1 domain containing 1##AJ007398|RSL1D1|26156|ribosomal L1 domain containing 1##BC019069|RSL1D1|26156|ribosomal L1 domain containing 1##AK000822|RSL1D1|26156|ribosomal L1 domain containing 1##BC009802|RSL1D1|26156|ribosomal L1 domain containing 1##BC017899|RSL1D1|26156|ribosomal L1 domain containing 1##BC107782|RSL1D1|26156|ribosomal L1 domain containing 1##BC070325|RSL1D1|26156|ribosomal L1 domain containing 1##AY154473|RSL1D1|26156|ribosomal L1 domain containing 1##BC112228|RSL1D1|26156|ribosomal L1 domain containing 1##BC113699|RSL1D1|26156|ribosomal L1 domain containing 1##BC016362|RSL1D1|26156|ribosomal L1 domain containing 1##AL049999|RSL1D1|26156|ribosomal L1 domain containing 1##AK295935|RSL1D1|26156|ribosomal L1 domain containing 1##NM_015659|RSL1D1|26156|ribosomal L1 domain containing 1##BC009503|GSPT1|2935|G1 to S phase transition 1##AK095483|GSPT1|2935|G1 to S phase transition 1	0.987957	CTCF.p2:-5:0.988
chr16	9029913	9030059	reg1015052.p1	5.537	+	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	-67126	-	NM_001042476 BC001333	-67734	-	NM_000303 TSC_hg19_v1_chr16_+_8891675 AK296123 U85773 AK300785 AK291537 AK299979 AK311035 AK312532 AK304320 AK296630 BC008310	-138288	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	27309	-	TSC_hg19_v1_chr16_+_9185545 NM_014117	155554	+	TSC_hg19_v1_chr16_+_9185577 BC113570	155617	+	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_000303|PMM2|5373|phosphomannomutase 2##U85773|PMM2|5373|phosphomannomutase 2##AK300785|PMM2|5373|phosphomannomutase 2##AK291537|PMM2|5373|phosphomannomutase 2##AK299979|PMM2|5373|phosphomannomutase 2##AK311035|PMM2|5373|phosphomannomutase 2##AK312532|PMM2|5373|phosphomannomutase 2##AK304320|PMM2|5373|phosphomannomutase 2##AK296630|PMM2|5373|phosphomannomutase 2##BC008310|PMM2|5373|phosphomannomutase 2##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##BC113570|C16orf72|29035|chromosome 16 open reading frame 72	0.97487	CTCF.p2:-9:0.808
chr12	54718491	54718596	reg1023435.p1	5.536	+	TSC_hg19_v1_chr12_-_54694800 L13974 BC005044 NM_001136023 AK313207	-23736	-	L24122 TSC_hg19_v1_chr12_-_54694667	-23886	-	TSC_hg19_v1_chr12_-_54689543 AK290555 AK290564 NM_006163 S77763	-29004	-	AF151878 NM_016057 AK311027 TSC_hg19_v1_chr12_+_54718914 AF161529 AK025956 AK026190	369	+	TSC_hg19_v1_chr12_+_54718922 AK293377 AK295325	377	+	TSC_hg19_v1_chr12_+_54718925 AB047848 AF086911	382	+	L13974|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##BC005044|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##NM_001136023|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##AK313207|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##L24122|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##AK290555|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##AK290564|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##NM_006163|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##S77763|NFE2|4778|nuclear factor (erythroid-derived 2), 45kDa##AF151878|COPZ1|22818|coatomer protein complex, subunit zeta 1##NM_016057|COPZ1|22818|coatomer protein complex, subunit zeta 1##AK311027|COPZ1|22818|coatomer protein complex, subunit zeta 1##AF161529|COPZ1|22818|coatomer protein complex, subunit zeta 1##AK025956|COPZ1|22818|coatomer protein complex, subunit zeta 1##AK026190|COPZ1|22818|coatomer protein complex, subunit zeta 1##AK293377|COPZ1|22818|coatomer protein complex, subunit zeta 1##AK295325|COPZ1|22818|coatomer protein complex, subunit zeta 1##AB047848|COPZ1|22818|coatomer protein complex, subunit zeta 1##AF086911|COPZ1|22818|coatomer protein complex, subunit zeta 1	0.0	
chr15	101661940	101662042	reg1025723.p1	5.536	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-202479	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-202517	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-241920	+	AB071402 TSC_hg19_v1_chr15_-_101791795	129745	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	130144	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	155672	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.024172	
chr3	43112886	43112992	reg1023993.p1	5.536	+	NM_001129908 AK311059 AK311069 AK091001 AX746726	-92146	+	NM_001205272 BC062786 AK130974 TSC_hg19_v1_chr3_+_42977866 AK296046	-135081	+	TSC_hg19_v1_chr3_+_42947649 NM_001134656 AK128676	-165282	+	TSC_hg19_v1_chr3_-_43147568 BC060861 NM_032806	34612	-	TSC_hg19_v1_chr3_+_43328077 AK291360 NM_001100594 NM_017719 BC071567 AK295187 CR749621 AK314376	215130	+	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	550499	-	NM_001129908|FAM198A|729085|family with sequence similarity 198, member A##AK311059|FAM198A|729085|family with sequence similarity 198, member A##AK311069|FAM198A|729085|family with sequence similarity 198, member A##AK091001|FAM198A|729085|family with sequence similarity 198, member A##NM_001205272|KRBOX1|100506243|KRAB box domain containing 1##BC062786|KRBOX1|100506243|KRAB box domain containing 1##AK130974|KRBOX1|100506243|KRAB box domain containing 1##NM_001134656|ZNF662|389114|zinc finger protein 662##AK128676|ZNF662|389114|zinc finger protein 662##BC060861|C3orf39|84892|chromosome 3 open reading frame 39##NM_032806|C3orf39|84892|chromosome 3 open reading frame 39##AK291360|SNRK|54861|SNF related kinase##NM_001100594|SNRK|54861|SNF related kinase##NM_017719|SNRK|54861|SNF related kinase##BC071567|SNRK|54861|SNF related kinase##AK295187|SNRK|54861|SNF related kinase##CR749621|SNRK|54861|SNF related kinase##AK314376|SNRK|54861|SNF related kinase##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10	0.967364	CTCF.p2:10:0.967
chr8	101859709	101859889	reg1002494.p2	5.536	+	BC041863 TSC_hg19_v1_chr8_-_101734972	-124833	-	Y00345 TSC_hg19_v1_chr8_-_101734316 AK130523 AK303120 NM_002568	-125482	-	BC015958 BC023217 BC023520 TSC_hg19_v1_chr8_-_101734301	-125504	-	TSC_hg19_v1_chr8_-_101936525 DQ185048	76725	-	TSC_hg19_v1_chr8_-_101962797 NM_001135702	103000	-	TSC_hg19_v1_chr8_-_101963538 NM_001135700 NM_001135701	103663	-	BC041863|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##Y00345|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK130523|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK303120|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##NM_002568|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC015958|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023217|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023520|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ185048|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135702|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135700|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135701|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	0.0	
chr10	73137308	73137488	reg1019377.p2	5.535	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-58352	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-58373	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-165018	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	19340	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	342194	-	AK074172 NM_001168390	360182	-	BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105	0.769549	CTCF.p2:-54:0.770
chr12	98548762	98548877	reg1024200.p1	5.535	+	BC027605 NM_001135175	-1247576	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-1247788	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-1754502	-	TSC_hg19_v1_chr12_-_98897622 AK126817	348808	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	360548	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	360588	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.128916	
chr21	45338156	45338276	reg1024202.p2	5.535	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	-53093	+	TSC_hg19_v1_chr21_+_45285029 AY358704	-53156	+	TSC_hg19_v1_chr21_+_45209457 AK223185 AK303000 AK223215 AK313116 BC000380 U79775 CU674182 DQ891391 DQ894567 BC014787	-128731	+	AK300562 NM_001037553	7062	+	TSC_hg19_v1_chr21_+_45432211 BC071569 NM_003274 U61500 BC046241 BC052247 BC094823 U19252 BC101728 AB385171 CU692332	94124	+	TSC_hg19_v1_chr21_+_45527202 AK314184	188986	+	NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AK223185|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK303000|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK223215|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK313116|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC000380|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##U79775|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ891391|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ894567|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC014787|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC071569|TRAPPC10|7109|trafficking protein particle complex 10##NM_003274|TRAPPC10|7109|trafficking protein particle complex 10##U61500|TRAPPC10|7109|trafficking protein particle complex 10##BC046241|TRAPPC10|7109|trafficking protein particle complex 10##BC052247|TRAPPC10|7109|trafficking protein particle complex 10##BC094823|TRAPPC10|7109|trafficking protein particle complex 10##U19252|TRAPPC10|7109|trafficking protein particle complex 10##BC101728|TRAPPC10|7109|trafficking protein particle complex 10##AK314184|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)	0.868042	CTCF.p2:-2:0.821
chr2	148777958	148778139	reg1023487.p2	5.535	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	-175403	+	TSC_hg19_v1_chr2_+_148602300 AK314124	-175713	+	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	-175931	+	TSC_hg19_v1_chr2_-_148778310 AK225092 BC005388 AF022108 AF047598 AF132596 BC014847 AK295721 AK291989 AK294878 AK298862 NM_001190882 NM_001190879 AK299749 NM_002552 NM_001190881 NM_181741	314	-	TSC_hg19_v1_chr2_+_148778636 NM_018328 EF542797	561	+	NM_181742	1124	-	BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK225092|ORC4|5000|origin recognition complex, subunit 4##BC005388|ORC4|5000|origin recognition complex, subunit 4##AF022108|ORC4|5000|origin recognition complex, subunit 4##AF047598|ORC4|5000|origin recognition complex, subunit 4##AF132596|ORC4|5000|origin recognition complex, subunit 4##BC014847|ORC4|5000|origin recognition complex, subunit 4##AK295721|ORC4|5000|origin recognition complex, subunit 4##AK291989|ORC4|5000|origin recognition complex, subunit 4##AK294878|ORC4|5000|origin recognition complex, subunit 4##AK298862|ORC4|5000|origin recognition complex, subunit 4##NM_001190882|ORC4|5000|origin recognition complex, subunit 4##NM_001190879|ORC4|5000|origin recognition complex, subunit 4##AK299749|ORC4|5000|origin recognition complex, subunit 4##NM_002552|ORC4|5000|origin recognition complex, subunit 4##NM_001190881|ORC4|5000|origin recognition complex, subunit 4##NM_181741|ORC4|5000|origin recognition complex, subunit 4##NM_018328|MBD5|55777|methyl-CpG binding domain protein 5##EF542797|MBD5|55777|methyl-CpG binding domain protein 5##NM_181742|ORC4|5000|origin recognition complex, subunit 4	0.390336	CTCF.p2:-27:0.390
chr4	4526213	4526374	reg1024373.p1	5.535	+	TSC_hg19_v1_chr4_+_4388828 AK299657 AK312288 AK301911	-137474	+	TSC_hg19_v1_chr4_+_4388753 AX775767 BC001745	-137549	+	AK125172 NM_001040101 NM_014392	-138311	+	AY453396 BT007150 BT020135 CU677069 AB028741 BC014613 BC071980 TSC_hg19_v1_chr4_-_4543708	17411	-	TSC_hg19_v1_chr4_-_4543741 AK310026	17438	-	TSC_hg19_v1_chr4_-_4543750 NM_016930	17468	-	AK299657|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK312288|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK301911|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##BC001745|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK125172|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##NM_001040101|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##NM_014392|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AY453396|STX18|53407|syntaxin 18##BT007150|STX18|53407|syntaxin 18##BT020135|STX18|53407|syntaxin 18##AB028741|STX18|53407|syntaxin 18##BC014613|STX18|53407|syntaxin 18##BC071980|STX18|53407|syntaxin 18##AK310026|STX18|53407|syntaxin 18##NM_016930|STX18|53407|syntaxin 18	0.0196	
chr6	100061389	100061511	reg1026135.p1	5.535	+	AY004253 NM_021620	-6801	+	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	-44847	-	CU679631 CU691126 AB528579 AB125137 BC050726 TSC_hg19_v1_chr6_-_100016505 AK223247 M74091 AK291914 AK222768 BC026272 BC030159 BC056153	-44993	-	AK123634 NM_001040179 NM_032503 AF347063	380660	-	NM_005068 U70212	850100	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	1267650	-	AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##AB125137|CCNC|892|cyclin C##BC050726|CCNC|892|cyclin C##AK223247|CCNC|892|cyclin C##M74091|CCNC|892|cyclin C##AK291914|CCNC|892|cyclin C##AK222768|CCNC|892|cyclin C##BC026272|CCNC|892|cyclin C##BC030159|CCNC|892|cyclin C##BC056153|CCNC|892|cyclin C##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.190769	
chr15	76622811	76622891	reg1020771.p1	5.534	+	TSC_hg19_v1_chr15_-_76603808 AK292979 NM_000126 NM_001127716	-19037	-	TSC_hg19_v1_chr15_-_76603791 BC029995	-19054	-	TSC_hg19_v1_chr15_-_76603771 AK300044 BC015526 D28380	-19086	-	TSC_hg19_v1_chr15_+_76629141 AB593133 AK001022 BC012136 NM_145805 BC011967 EU446846	6311	+	BX647285 NM_001145923	531433	-	AF242528 NM_020843	553352	-	AK292979|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##NM_000126|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##NM_001127716|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC029995|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##AK300044|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC015526|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##AB593133|ISL2|64843|ISL LIM homeobox 2##AK001022|ISL2|64843|ISL LIM homeobox 2##BC012136|ISL2|64843|ISL LIM homeobox 2##NM_145805|ISL2|64843|ISL LIM homeobox 2##BC011967|ISL2|64843|ISL LIM homeobox 2##EU446846|ISL2|64843|ISL LIM homeobox 2##BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER##NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AF242528|SCAPER|49855|S-phase cyclin A-associated protein in the ER##NM_020843|SCAPER|49855|S-phase cyclin A-associated protein in the ER	0.949607	CTCF.p2:-16:0.950
chr10	13141216	13141330	reg1021188.p1	5.533	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	-97574	-	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-749496	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-749556	+	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	872	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	62295	+	BC018068 NM_145314	135054	-	AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10##BC018068|UCMA|221044|upper zone of growth plate and cartilage matrix associated##NM_145314|UCMA|221044|upper zone of growth plate and cartilage matrix associated	0.291486	CTCF.p2:15:0.291
chr1	25353383	25353520	reg1024018.p1	5.533	+	BC013362 AK310945 NM_001031680 AF022726	-61909	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-96665	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-96712	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	205536	-	BC065040 TSC_hg19_v1_chr1_-_25573922	220472	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	220522	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.010439	
chr12	8737205	8737320	reg1026400.p1	5.533	+	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	-43788	-	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	-71031	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	-128660	+	AB040431 BC006296 NM_020661	28177	-	TSC_hg19_v1_chr12_-_8815272 AK315807 BC005901 AK290585 AK299475	78034	-	TSC_hg19_v1_chr12_-_8815423 U37283 NM_003480	78139	-	BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##AB040431|AICDA|57379|activation-induced cytidine deaminase##BC006296|AICDA|57379|activation-induced cytidine deaminase##NM_020661|AICDA|57379|activation-induced cytidine deaminase##AK315807|MFAP5|8076|microfibrillar associated protein 5##BC005901|MFAP5|8076|microfibrillar associated protein 5##AK290585|MFAP5|8076|microfibrillar associated protein 5##AK299475|MFAP5|8076|microfibrillar associated protein 5##U37283|MFAP5|8076|microfibrillar associated protein 5##NM_003480|MFAP5|8076|microfibrillar associated protein 5	0.830069	CTCF.p2:-9:0.830
chr19	36422274	36422430	reg1000359.p1	5.533	+	TSC_hg19_v1_chr19_-_36399212 NM_001173514 NM_001173515 NM_003332 NM_198125	-23139	-	TSC_hg19_v1_chr19_-_36399198 AF019562 BC011175 AK290385	-23160	-	TSC_hg19_v1_chr19_-_36399181 BT009851 CR450342 CR542202 AB590208 AY074782 CU679890 DQ891092 DQ894274 AJ010098	-23202	-	BC003578 NM_024509	5669	+	TSC_hg19_v1_chr19_+_36486091 NM_001042631 BC007205 BC064605 BC069054 BC137516 BC137517	63742	+	CU690916 AK093764 AX748293 NM_001039876 BC052573 BC038360	77286	-	NM_001173514|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_001173515|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_003332|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_198125|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AF019562|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BC011175|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AK290385|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BT009851|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR450342|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR542202|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AY074782|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ891092|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ894274|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AJ010098|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BC003578|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_024509|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_001042631|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC007205|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC064605|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC069054|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137516|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137517|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##AK093764|C19orf46|163183|chromosome 19 open reading frame 46##NM_001039876|C19orf46|163183|chromosome 19 open reading frame 46##BC052573|C19orf46|163183|chromosome 19 open reading frame 46##BC038360|C19orf46|163183|chromosome 19 open reading frame 46	0.0	
chr19	50420208	50420307	reg1025236.p1	5.533	+	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	-7155	-	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	-20104	-	TSC_hg19_v1_chr19_+_50381392 AK090606 AX746531	-38799	+	NM_012068 AK290592	11731	+	NM_001193646 AK091985 AB021663 AK024402 TSC_hg19_v1_chr19_+_50432461 AB073613 BC005174	12177	+	AJ880387 TSC_hg19_v1_chr19_-_50432664 AJ880386	12400	-	CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##AK090606|TBC1D17|79735|TBC1 domain family, member 17##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5##NM_001193646|ATF5|22809|activating transcription factor 5##AK091985|ATF5|22809|activating transcription factor 5##AB021663|ATF5|22809|activating transcription factor 5##AK024402|ATF5|22809|activating transcription factor 5##AB073613|ATF5|22809|activating transcription factor 5##BC005174|ATF5|22809|activating transcription factor 5##AJ880387|IL4I1|259307|interleukin 4 induced 1##AJ880386|IL4I1|259307|interleukin 4 induced 1	0.988598	CTCF.p2:-13:0.722	CTCF.p2:-14:0.267
chr19	7294891	7295055	reg1026502.p2	5.533	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	-1013	-	TSC_hg19_v1_chr19_-_7099547 AK127494	-195422	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-225258	+	TSC_hg19_v1_chr19_+_7460030 NM_015318	165034	+	TSC_hg19_v1_chr19_+_7460061 AB011093	165104	+	AK127045 NM_001130955	209600	+	BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr20	2736805	2736953	reg1030657.p1	5.533	+	TSC_hg19_v1_chr20_+_2673520 AB037863 NM_001110514	-63197	+	TSC_hg19_v1_chr20_-_2644844 BC019037 CU674954 DQ892561 DQ895776 DQ895816 EU831924 EU832019 AK001905 BC001960 NM_006899 NM_174855 NM_174856 AK309488 AK315641 AK300485	-92045	-	AL050094 TSC_hg19_v1_chr20_-_2641583	-95343	-	AK027661 BC032692 AY358956 TSC_hg19_v1_chr20_-_2781253	44364	-	AK075527 BC063430 AK075508 TSC_hg19_v1_chr20_-_2781274 AK315027 NM_001184699 NM_019609	44404	-	AK129653 AK312218 BC014591 NM_080739 AL713708	58767	+	AB037863|EBF4|57593|early B-cell factor 4##NM_001110514|EBF4|57593|early B-cell factor 4##BC019037|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ892561|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ895776|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ895816|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##EU831924|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##EU832019|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK001905|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##BC001960|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_006899|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_174855|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_174856|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK309488|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK315641|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK300485|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK027661|CPXM1|56265|carboxypeptidase X (M14 family), member 1##BC032692|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AY358956|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK075527|CPXM1|56265|carboxypeptidase X (M14 family), member 1##BC063430|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK075508|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK315027|CPXM1|56265|carboxypeptidase X (M14 family), member 1##NM_001184699|CPXM1|56265|carboxypeptidase X (M14 family), member 1##NM_019609|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK312218|C20orf141|128653|chromosome 20 open reading frame 141##BC014591|C20orf141|128653|chromosome 20 open reading frame 141##NM_080739|C20orf141|128653|chromosome 20 open reading frame 141##AL713708|C20orf141|128653|chromosome 20 open reading frame 141	0.998674	CTCF.p2:-28:0.999
chr3	20971680	20971771	reg1022203.p1	5.533	+	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-744051	-	BC070075 TSC_hg19_v1_chr3_+_20081907 BC060823 AB527402	-889815	+	NM_003884 U57317	-890202	+	AK026072 NM_024697	821090	-	AK310298 TSC_hg19_v1_chr3_-_22414124	1442409	-	TSC_hg19_v1_chr3_+_23244600 AK307075	2272858	+	AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC070075|KAT2B|8850|K(lysine) acetyltransferase 2B##BC060823|KAT2B|8850|K(lysine) acetyltransferase 2B##NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B##U57317|KAT2B|8850|K(lysine) acetyltransferase 2B##AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AK310298|ZNF385D|79750|zinc finger protein 385D##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2	0.972855	CTCF.p2:3:0.973
chr16	84001747	84001869	reg1023267.p1	5.532	+	NM_182981 TSC_hg19_v1_chr16_+_83986844 AK290383 AY258068 AY037158 BC020434 BC032476 BC093687 BC113417	-14924	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	-69039	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	-160152	+	TSC_hg19_v1_chr16_+_84002230 AY299331 NM_019065 BC131615 AK127376	404	+	NM_001080442	73953	-	TSC_hg19_v1_chr16_-_84150441 AK291773 BC114555 BC114961 AK299067	148604	-	NM_182981|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK290383|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY258068|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY037158|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC020434|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC032476|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC093687|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC113417|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##AY299331|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_019065|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##BC131615|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##AK127376|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_001080442|SLC38A8|146167|solute carrier family 38, member 8##AK291773|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114555|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114961|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##AK299067|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1	0.977556	CTCF.p2:2:0.978
chr2	141722070	141722152	reg1022546.p1	5.532	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-2184305	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-2462621	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-2462718	+	TSC_hg19_v1_chr2_-_142888540 AK054663	1166445	-	AF176832 NM_018557	1167158	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	1913095	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.830069	CTCF.p2:1:0.830
chr5	66789628	66789758	reg1029727.p1	5.532	+	BC109069 BC109070 D83597 NM_005582 AK313177	-297093	-	AY830839 BC018692 NM_015183	-665090	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-897485	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	721887	+	TSC_hg19_v1_chr5_+_67511602 BC094795	721914	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	794601	+	BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.924993	CTCF.p2:-9:0.875
chr6	37138107	37138223	reg1024499.p1	5.532	+	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	-43	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-164664	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-183895	-	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	87221	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	87434	+	TSC_hg19_v1_chr6_-_37225916 BC009625 NM_001162900	87762	-	NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B##BC009625|TMEM217|221468|transmembrane protein 217##NM_001162900|TMEM217|221468|transmembrane protein 217	0.029012	
chr7	37382381	37382562	reg1026204.p1	5.532	+	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	-356751	-	BC064635 NM_001039459	-357781	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-618395	-	AK291784 NM_001206482	10800	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	105997	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	106084	-	D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1	0.0	
chrX	85388929	85389047	reg1024537.p1	5.532	+	AK299323 BC032237 BC130494 BC130496 AK291160 AK312443 NM_000390 NM_001145414 X78121	-86437	-	TSC_hg19_v1_chrX_-_84634749 AF309774 NM_024921	-754239	-	TSC_hg19_v1_chrX_-_84634671 AK314295 AK025039 AK290360 BC017500	-754292	-	TSC_hg19_v1_chrX_+_85403454 AK290596 NM_001139514 NM_053281	14464	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	14477	+	AK055953 AK298787 NM_001139515	128982	+	AK299323|CHM|1121|choroideremia (Rab escort protein 1)##BC032237|CHM|1121|choroideremia (Rab escort protein 1)##BC130494|CHM|1121|choroideremia (Rab escort protein 1)##BC130496|CHM|1121|choroideremia (Rab escort protein 1)##AK291160|CHM|1121|choroideremia (Rab escort protein 1)##AK312443|CHM|1121|choroideremia (Rab escort protein 1)##NM_000390|CHM|1121|choroideremia (Rab escort protein 1)##NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)##X78121|CHM|1121|choroideremia (Rab escort protein 1)##AF309774|POF1B|79983|premature ovarian failure, 1B##NM_024921|POF1B|79983|premature ovarian failure, 1B##AK314295|POF1B|79983|premature ovarian failure, 1B##AK025039|POF1B|79983|premature ovarian failure, 1B##AK290360|POF1B|79983|premature ovarian failure, 1B##BC017500|POF1B|79983|premature ovarian failure, 1B##AK290596|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139514|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_053281|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)##AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)	0.993145	CTCF.p2:-20:0.993
chr4	165856667	165856808	reg1028746.p1	5.531	+	AK289711 NM_001166373	-552331	-	NM_012403	-737875	-	AB463878 AK000675 AK301408 NM_017923	-1322022	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	21365	+	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	21414	+	BC089393 NM_001012414	42080	-	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61	0.0	
chr8	90996464	90996645	reg1006433.p2	5.531	+	BC031054 NM_001126111 TSC_hg19_v1_chr8_+_90914816	-81760	+	AF061326 NM_004337	-82459	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	-226270	+	TSC_hg19_v1_chr8_-_90996804 AB528582 BC143065 BC143066 BC108650 BC016762 BC005293 AF058696 AF051334 AK223256 BC146797 BC136802 BC136803 BC144413	278	-	TSC_hg19_v1_chr8_-_90996896 AK001017 AK289848 BC071590 BC040519 BX640816 NM_002485 AK312410	350	-	NM_001359 BC105080 BC105082 BC143669 TSC_hg19_v1_chr8_+_91013704 AK300069 L26050	17095	+	BC031054|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_001126111|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##AF061326|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_004337|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC143065|NBN|4683|nibrin##BC143066|NBN|4683|nibrin##BC108650|NBN|4683|nibrin##BC016762|NBN|4683|nibrin##BC005293|NBN|4683|nibrin##AF058696|NBN|4683|nibrin##AF051334|NBN|4683|nibrin##AK223256|NBN|4683|nibrin##BC146797|NBN|4683|nibrin##BC136802|NBN|4683|nibrin##BC136803|NBN|4683|nibrin##BC144413|NBN|4683|nibrin##AK001017|NBN|4683|nibrin##AK289848|NBN|4683|nibrin##BC071590|NBN|4683|nibrin##BC040519|NBN|4683|nibrin##BX640816|NBN|4683|nibrin##NM_002485|NBN|4683|nibrin##AK312410|NBN|4683|nibrin##NM_001359|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105080|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105082|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC143669|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK300069|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##L26050|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial	0.999791	CTCF.p2:-26:1.000
chrX	116877982	116878096	reg1026640.p1	5.531	+	BC062223 NM_001017978 AK000618 AK026566	-1283890	-	TSC_hg19_v1_chrX_+_115567832 BC093710 BC093712	-1310202	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	-1310272	+	AK125356 NM_033495 NM_001168300	229690	-	AK296324 NM_001168299	241289	-	AL591986 TSC_hg19_v1_chrX_-_117250764 AK316509 NM_001168302 NM_001168303	372686	-	BC062223|CXorf61|203413|chromosome X open reading frame 61##NM_001017978|CXorf61|203413|chromosome X open reading frame 61##AK000618|CXorf61|203413|chromosome X open reading frame 61##AK026566|CXorf61|203413|chromosome X open reading frame 61##BC093710|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##BC093712|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK125356|KLHL13|90293|kelch-like 13 (Drosophila)##NM_033495|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168300|KLHL13|90293|kelch-like 13 (Drosophila)##AK296324|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)##AL591986|KLHL13|90293|kelch-like 13 (Drosophila)##AK316509|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)	0.370222	CTCF.p2:2:0.370
chr1	26490800	26490910	reg1025365.p1	5.530	+	AK024112 NM_024869 BC025658 AK290715	-5315	+	AK312872 NM_001243533 NM_152835 TSC_hg19_v1_chr1_+_26438314 AF411102 BC028713 AK129596	-52516	+	NM_001243532	-53200	+	TSC_hg19_v1_chr1_+_26496395 AK311926 NM_015871 BC002580 BC019267 AB527484 D45213 EU446798	5600	+	TSC_hg19_v1_chr1_+_26503979 AK296814 NM_006314 AB209335 AK222904 BC011604 BC012797 AF100153 AK001900 AK222817 AK292646 AK302056	13141	+	TSC_hg19_v1_chr1_+_26504028 AB590388 DQ892241 DQ895441 CU679980 BT006900	13176	+	AK024112|FAM110D|79927|family with sequence similarity 110, member D##NM_024869|FAM110D|79927|family with sequence similarity 110, member D##BC025658|FAM110D|79927|family with sequence similarity 110, member D##AK290715|FAM110D|79927|family with sequence similarity 110, member D##AK312872|PDIK1L|149420|PDLIM1 interacting kinase 1 like##NM_001243533|PDIK1L|149420|PDLIM1 interacting kinase 1 like##NM_152835|PDIK1L|149420|PDLIM1 interacting kinase 1 like##AF411102|PDIK1L|149420|PDLIM1 interacting kinase 1 like##BC028713|PDIK1L|149420|PDLIM1 interacting kinase 1 like##NM_001243532|PDIK1L|149420|PDLIM1 interacting kinase 1 like##AK311926|ZNF593|51042|zinc finger protein 593##NM_015871|ZNF593|51042|zinc finger protein 593##BC002580|ZNF593|51042|zinc finger protein 593##BC019267|ZNF593|51042|zinc finger protein 593##D45213|ZNF593|51042|zinc finger protein 593##EU446798|ZNF593|51042|zinc finger protein 593##AK296814|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##NM_006314|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AB209335|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK222904|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##BC011604|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##BC012797|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AF100153|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK001900|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK222817|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK292646|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##AK302056|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##DQ892241|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##DQ895441|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1##BT006900|CNKSR1|10256|connector enhancer of kinase suppressor of Ras 1	1.538054	CTCF.p2:9:1.000	CTCF.p2:87:0.538
chr14	101119802	101119937	reg1029170.p1	5.530	+	BC002607 NM_020836	-83739	-	AB527893 CU678064 EU832622 EU832695 NM_001159531	-85536	-	TSC_hg19_v1_chr14_+_100842812 NM_001161476 BX248767 AK291960 NM_024515 BC067872 AY295082	-277031	+	TSC_hg19_v1_chr14_+_101193228 NM_003836 AK289384 AK297918 AK313258 BC007741 BC014015	73354	+	TSC_hg19_v1_chr14_+_101193275 BC013197	73411	+	TSC_hg19_v1_chr14_+_101193330 CU675787 DQ017081 DQ126100 DQ138965 Z12172	73490	+	BC002607|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_020836|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832622|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832695|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001159531|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001161476|WDR25|79446|WD repeat domain 25##BX248767|WDR25|79446|WD repeat domain 25##AK291960|WDR25|79446|WD repeat domain 25##NM_024515|WDR25|79446|WD repeat domain 25##BC067872|WDR25|79446|WD repeat domain 25##AY295082|WDR25|79446|WD repeat domain 25##NM_003836|DLK1|8788|delta-like 1 homolog (Drosophila)##AK289384|DLK1|8788|delta-like 1 homolog (Drosophila)##AK297918|DLK1|8788|delta-like 1 homolog (Drosophila)##AK313258|DLK1|8788|delta-like 1 homolog (Drosophila)##BC007741|DLK1|8788|delta-like 1 homolog (Drosophila)##BC014015|DLK1|8788|delta-like 1 homolog (Drosophila)##BC013197|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ017081|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ126100|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ138965|DLK1|8788|delta-like 1 homolog (Drosophila)##Z12172|DLK1|8788|delta-like 1 homolog (Drosophila)	0.992638	CTCF.p2:-5:0.993
chr15	55582385	55582481	reg1000032.p1	5.530	+	TSC_hg19_v1_chr15_-_55582012 AK312836 NM_183235	-442	-	BC132800 BC136423 BC107680 NM_183236	-19335	-	AF125393 NM_183234 U57094 U38654 NM_004580	-19896	-	NM_004855 AK293666 AK314706 BC017711	28730	+	TSC_hg19_v1_chr15_-_55611322 AB593170	28907	-	D42138 TSC_hg19_v1_chr15_+_55611429 AK223330	28991	+	AK312836|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183235|RAB27A|5873|RAB27A, member RAS oncogene family##BC132800|RAB27A|5873|RAB27A, member RAS oncogene family##BC136423|RAB27A|5873|RAB27A, member RAS oncogene family##BC107680|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183236|RAB27A|5873|RAB27A, member RAS oncogene family##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004855|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK293666|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK314706|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##BC017711|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##D42138|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK223330|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B	0.0	
chr5	130601153	130601334	reg1026004.p1	5.530	+	TSC_hg19_v1_chr5_+_130599794 BC058909	-1443	+	AK312406 TSC_hg19_v1_chr5_+_130599768	-1475	+	TSC_hg19_v1_chr5_+_130599764 BC023555 BC050430	-1487	+	AF478468 AF478469 AB527407 TSC_hg19_v1_chr5_-_130970764	369514	-	BC140820 BC144627 TSC_hg19_v1_chr5_-_130970834	369576	-	BC133703 TSC_hg19_v1_chr5_-_130970893 AF394782 AK302640	369635	-	BC058909|CDC42SE2|56990|CDC42 small effector 2##AK312406|CDC42SE2|56990|CDC42 small effector 2##BC023555|CDC42SE2|56990|CDC42 small effector 2##BC050430|CDC42SE2|56990|CDC42 small effector 2##AF478468|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF478469|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC140820|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC144627|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC133703|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF394782|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AK302640|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	0.0	
chr6	13575575	13575668	reg1022649.p1	5.530	+	TSC_hg19_v1_chr6_+_13574830 NM_001193267 NM_001242827 NM_031244 BX538030 AK302467 AK000355 AK294162 AJ420496 NM_012241 BC000126 AF083110	-778	+	TSC_hg19_v1_chr6_-_13487810 AK000337 NM_001242629 NM_018988	-87763	-	TSC_hg19_v1_chr6_-_13487051 BC148295 BC119005 BC124557	-88524	-	BC064478 TSC_hg19_v1_chr6_-_13615415	39782	-	TSC_hg19_v1_chr6_+_13615570 AF172066 NM_016167 BC062683 AK075301 BC023517 CU692792	39979	+	AB008515 TSC_hg19_v1_chr6_-_13711498	135870	-	NM_001193267|SIRT5|23408|sirtuin 5##NM_001242827|SIRT5|23408|sirtuin 5##NM_031244|SIRT5|23408|sirtuin 5##BX538030|SIRT5|23408|sirtuin 5##AK302467|SIRT5|23408|sirtuin 5##AK000355|SIRT5|23408|sirtuin 5##AK294162|SIRT5|23408|sirtuin 5##AJ420496|SIRT5|23408|sirtuin 5##NM_012241|SIRT5|23408|sirtuin 5##BC000126|SIRT5|23408|sirtuin 5##AF083110|SIRT5|23408|sirtuin 5##AK000337|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242629|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_018988|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC148295|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC119005|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC124557|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF172066|NOL7|51406|nucleolar protein 7, 27kDa##NM_016167|NOL7|51406|nucleolar protein 7, 27kDa##BC062683|NOL7|51406|nucleolar protein 7, 27kDa##AK075301|NOL7|51406|nucleolar protein 7, 27kDa##BC023517|NOL7|51406|nucleolar protein 7, 27kDa##AB008515|RANBP9|10048|RAN binding protein 9	0.915367	CTCF.p2:11:0.915
chr6	25890755	25890905	reg1021161.p1	5.530	+	BC017952 AK298297 AK298367 AK298271 NM_001098486 NM_006632	-16376	-	AK290783 AK308035 NM_005074	-58553	-	AK024903 NM_005495 TSC_hg19_v1_chr6_+_25754969 AK293354	-135881	+	U90544 NM_005835	40061	-	TSC_hg19_v1_chr6_+_25963029 BX640949 AK313248 BC026930 NM_006355 AB209906	72203	+	CR936707 TSC_hg19_v1_chr6_+_25963398	72578	+	BC017952|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##AK298297|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##AK298367|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##AK298271|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##NM_001098486|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##NM_006632|SLC17A3|10786|solute carrier family 17 (sodium phosphate), member 3##AK290783|SLC17A1|6568|solute carrier family 17 (sodium phosphate), member 1##AK308035|SLC17A1|6568|solute carrier family 17 (sodium phosphate), member 1##NM_005074|SLC17A1|6568|solute carrier family 17 (sodium phosphate), member 1##AK024903|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4##NM_005495|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4##AK293354|SLC17A4|10050|solute carrier family 17 (sodium phosphate), member 4##U90544|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2##NM_005835|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2##BX640949|TRIM38|10475|tripartite motif containing 38##AK313248|TRIM38|10475|tripartite motif containing 38##BC026930|TRIM38|10475|tripartite motif containing 38##NM_006355|TRIM38|10475|tripartite motif containing 38##AB209906|TRIM38|10475|tripartite motif containing 38##CR936707|TRIM38|10475|tripartite motif containing 38	0.919498	CTCF.p2:47:0.919
chr13	20534394	20534496	reg1024345.p1	5.529	+	TSC_hg19_v1_chr13_+_20532911 AJ224901 BX647944 NM_001190965	-1480	+	TSC_hg19_v1_chr13_+_20532881 AK226118 AK289741	-1561	+	TSC_hg19_v1_chr13_+_20532834 BC036372 NM_003453 NM_197968 AL136621 NM_001190964 Y13472	-1628	+	NM_021954	200737	-	BC017048 BC071703 TSC_hg19_v1_chr13_-_20767078 AK225966	232613	-	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	232666	-	AJ224901|ZMYM2|7750|zinc finger, MYM-type 2##BX647944|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190965|ZMYM2|7750|zinc finger, MYM-type 2##AK226118|ZMYM2|7750|zinc finger, MYM-type 2##AK289741|ZMYM2|7750|zinc finger, MYM-type 2##BC036372|ZMYM2|7750|zinc finger, MYM-type 2##NM_003453|ZMYM2|7750|zinc finger, MYM-type 2##NM_197968|ZMYM2|7750|zinc finger, MYM-type 2##AL136621|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190964|ZMYM2|7750|zinc finger, MYM-type 2##Y13472|ZMYM2|7750|zinc finger, MYM-type 2##NM_021954|GJA3|2700|gap junction protein, alpha 3, 46kDa##BC017048|GJB2|2706|gap junction protein, beta 2, 26kDa##BC071703|GJB2|2706|gap junction protein, beta 2, 26kDa##AK225966|GJB2|2706|gap junction protein, beta 2, 26kDa##AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa	0.905886	CTCF.p2:33:0.906
chr1	84606972	84607113	reg1024207.p1	5.529	+	TSC_hg19_v1_chr1_+_84543744 AK074904 BC037304 BC035058 NM_002731 NM_207578 AK314550 BC016285 M34181 AB463197 AM392526 AM393233 AM393317 AM393497 CU677593 EU832783 GQ129404 AB451239 AB451364	-63206	+	AK126792 BC048970 BC032829 TSC_hg19_v1_chr1_-_84464848 BC060878 BC028350 NM_024686	-142246	-	TSC_hg19_v1_chr1_-_84326677 BC036594	-280366	-	TSC_hg19_v1_chr1_+_84609953 NM_182948 BX537705 BX641026	2915	+	TSC_hg19_v1_chr1_+_84609995 AY927364 AK304322 EU832837 GQ129233	2973	+	AY927365 AK296482 AK304375 CR936631 NM_001242857 NM_001242858 NM_001242859	22997	+	AK074904|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BC035058|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_002731|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_207578|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK314550|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BC016285|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##M34181|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM392526|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM393233|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM393317|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AM393497|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##EU832783|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##GQ129404|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AB451239|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AB451364|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##NM_182948|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BX537705|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BX641026|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AY927364|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK304322|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##EU832837|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##GQ129233|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK296482|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK304375|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##CR936631|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_001242857|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_001242858|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_001242859|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta	0.031708	
chr20	11657320	11657440	reg1023450.p1	5.529	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-1002811	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	-1003176	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-1241404	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	214069	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	241177	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	1332261	+	BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3	0.97697	CTCF.p2:-2:0.977
chr20	52371060	52371240	reg1025984.p2	5.529	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-160351	-	AF041259 NM_006526	-171515	-	AK302570 NM_001193421	-569329	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	315912	-	AK315220 NM_003657	316153	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	419370	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr2	237967849	237968029	reg1021968.p1	5.529	+	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	-489511	+	BC043504 NM_024726 AK294105 BC028699	-551807	-	NM_212556 BX647589	-794945	-	BC036499 NM_006710 NM_198189	26079	+	TSC_hg19_v1_chr2_-_237994424 AK056246	26498	-	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	26581	+	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	0.0	
chr3	168185235	168185380	reg1025916.p1	5.529	+	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	-371876	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	-372192	-	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-731818	+	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	678772	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	679055	-	BX640908 NM_001164000	680214	-	AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus	0.998669	CTCF.p2:15:0.999
chr8	118896608	118896737	reg1028433.p1	5.529	+	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	-363630	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	-363714	+	NM_001172814 NM_173851	-749336	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	227289	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	737453	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	737535	-	BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##NM_080651|MED30|90390|mediator complex subunit 30##NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12	0.024834	
chr9	77357840	77357967	reg1026950.p1	5.529	+	NM_006914 BC051830 Y08639	-245629	+	TSC_hg19_v1_chr9_+_75766797 BC001275	-1591100	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	-1591125	+	AY333284 NM_001177311	144359	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	144831	-	AF350881 AK057748 NM_017662	145106	-	NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B##BC001275|ANXA1|301|annexin A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##AY333284|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177311|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF350881|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AK057748|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_017662|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	0.021743	
chr9	94717163	94717265	reg1027040.p2	5.529	+	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	-4825	-	TSC_hg19_v1_chr9_-_94711095 BC033697	-6086	-	TSC_hg19_v1_chr9_-_94186159 NM_005384	-531032	-	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	160450	-	TSC_hg19_v1_chr9_-_95055945 AB209234 D28473 AK293014	338724	-	U04953 TSC_hg19_v1_chr9_-_95055976 BX647236 AK308202 BX647430 NM_013417 BX537417 BX537429 BX538109 BX647071 BX648567	338761	-	BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_005384|NFIL3|4783|nuclear factor, interleukin 3 regulated##AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AB209234|IARS|3376|isoleucyl-tRNA synthetase##D28473|IARS|3376|isoleucyl-tRNA synthetase##AK293014|IARS|3376|isoleucyl-tRNA synthetase##U04953|IARS|3376|isoleucyl-tRNA synthetase##BX647236|IARS|3376|isoleucyl-tRNA synthetase##AK308202|IARS|3376|isoleucyl-tRNA synthetase##BX647430|IARS|3376|isoleucyl-tRNA synthetase##NM_013417|IARS|3376|isoleucyl-tRNA synthetase##BX537417|IARS|3376|isoleucyl-tRNA synthetase##BX537429|IARS|3376|isoleucyl-tRNA synthetase##BX538109|IARS|3376|isoleucyl-tRNA synthetase##BX647071|IARS|3376|isoleucyl-tRNA synthetase##BX648567|IARS|3376|isoleucyl-tRNA synthetase	0.799134	CTCF.p2:-1:0.799
chr12	719712	719857	reg1024379.p2	5.528	+	AB089940 NM_173593	-150242	+	NM_001130146 NM_032358 AK293165 TSC_hg19_v1_chr12_+_510809 AK027638	-209003	+	TSC_hg19_v1_chr12_-_498451 AK301150 AK301273 AB209999 BC048307 BC053893 NM_001042603 BC092417	-221182	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	32394	+	TSC_hg19_v1_chr12_-_752800 AK298043	33035	-	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	52931	-	AB089940|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_173593|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_001130146|CCDC77|84318|coiled-coil domain containing 77##NM_032358|CCDC77|84318|coiled-coil domain containing 77##AK293165|CCDC77|84318|coiled-coil domain containing 77##AK027638|CCDC77|84318|coiled-coil domain containing 77##AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A##AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A##AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A##BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A##BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A##NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A##BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2	0.0	
chr19	3692637	3692733	reg1024271.p2	5.528	+	BC004149 TSC_hg19_v1_chr19_-_3632587	-60169	-	TSC_hg19_v1_chr19_-_3626795 AY917150 NM_001080543 NM_021231	-65884	-	TSC_hg19_v1_chr19_-_3626774 AK299963	-65904	-	FJ965536 FJ965537 TSC_hg19_v1_chr19_-_3700457 AB385354 AB011161	7737	-	AK301309 TSC_hg19_v1_chr19_-_3700461 AK315912	7775	-	TSC_hg19_v1_chr19_-_3700467 NM_001195733 NM_012398	7789	-	BC004149|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AY917150|C19orf29|58509|chromosome 19 open reading frame 29##NM_001080543|C19orf29|58509|chromosome 19 open reading frame 29##NM_021231|C19orf29|58509|chromosome 19 open reading frame 29##AK299963|C19orf29|58509|chromosome 19 open reading frame 29##FJ965536|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##FJ965537|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AB011161|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AK301309|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##AK315912|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##NM_001195733|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma##NM_012398|PIP5K1C|23396|phosphatidylinositol-4-phosphate 5-kinase, type I, gamma	0.954233	CTCF.p2:2:0.954
chr19	58840530	58840650	reg1025885.p1	5.528	+	TSC_hg19_v1_chr19_+_58838401 BX537741 NM_181846 AK128716	-2202	+	TSC_hg19_v1_chr19_+_58816758 BC010118	-23820	+	TSC_hg19_v1_chr19_+_58816742 BC011670 AK054868	-23862	+	BX537419 TSC_hg19_v1_chr19_-_58858950 AK056201	18359	-	TSC_hg19_v1_chr19_-_58864830 AK289417 AF414429 AK055885 AB073611 NM_130786	24252	-	BC118983 BC125273 AK124712 AK125350 TSC_hg19_v1_chr19_-_58874199 AK126727 AK172804 AK131209 NM_001207009 NM_198458	33592	-	BX537741|ZSCAN22|342945|zinc finger and SCAN domain containing 22##NM_181846|ZSCAN22|342945|zinc finger and SCAN domain containing 22##AK128716|ZSCAN22|342945|zinc finger and SCAN domain containing 22##BC010118|ERVK3-1|100506584|endogenous retrovirus group K3, member 1##BC011670|ERVK3-1|100506584|endogenous retrovirus group K3, member 1##AK054868|ERVK3-1|100506584|endogenous retrovirus group K3, member 1##BX537419|A1BG|1|alpha-1-B glycoprotein##AK056201|A1BG|1|alpha-1-B glycoprotein##AK289417|A1BG|1|alpha-1-B glycoprotein##AF414429|A1BG|1|alpha-1-B glycoprotein##AK055885|A1BG|1|alpha-1-B glycoprotein##AB073611|A1BG|1|alpha-1-B glycoprotein##NM_130786|A1BG|1|alpha-1-B glycoprotein##BC118983|ZNF497|162968|zinc finger protein 497##BC125273|ZNF497|162968|zinc finger protein 497##AK126727|ZNF497|162968|zinc finger protein 497##AK131209|ZNF497|162968|zinc finger protein 497##NM_001207009|ZNF497|162968|zinc finger protein 497##NM_198458|ZNF497|162968|zinc finger protein 497	0.991613	CTCF.p2:-19:0.992
chr7	109484572	109484675	reg1025394.p2	5.528	+	NM_001024607	-959987	-	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-1274249	+	TSC_hg19_v1_chr7_+_108210292 AK092204	-1274325	+	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	1246500	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	1717861	-	TSC_hg19_v1_chr7_-_111428948 AK294820	1944388	-	NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AK092204|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK294820|DOCK4|9732|dedicator of cytokinesis 4	0.988435	CTCF.p2:-10:0.988
chr7	19748714	19748835	reg1025499.p1	5.528	+	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	-128	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	-563761	-	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	-591496	-	BX648384 NM_152774	63629	-	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	508206	-	AK295044 TSC_hg19_v1_chr7_+_20370337	621563	+	HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##AK295044|ITGB8|3696|integrin, beta 8	0.996976	CTCF.p2:8:0.997
chr10	90031030	90031207	reg1023199.p1	5.527	+	TSC_hg19_v1_chr10_+_89623420 U96180	-407691	+	TSC_hg19_v1_chr10_+_89623380 BC005821	-407729	+	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	-407892	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	311896	-	BC042900 BC031219 NM_001010939	315395	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	393062	+	U96180|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric	0.0	
chr12	132239945	132240075	reg1026247.p2	5.527	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	-44354	+	TSC_hg19_v1_chr12_+_132195623 BC142980	-44397	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-801557	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	72956	+	TSC_hg19_v1_chr12_+_132379266 AF045458 NM_003565	139263	+	TSC_hg19_v1_chr12_+_132413775 NM_001002020 AK292242	173749	+	BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AF045458|ULK1|8408|unc-51-like kinase 1 (C. elegans)##NM_003565|ULK1|8408|unc-51-like kinase 1 (C. elegans)##NM_001002020|PUS1|80324|pseudouridylate synthase 1##AK292242|PUS1|80324|pseudouridylate synthase 1	0.0	
chr1	226924938	226925015	reg1026124.p1	5.527	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-188359	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-188475	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-329173	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	1962	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	133304	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	202970	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.0	
chr15	75337765	75337930	reg1026518.p1	5.527	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-21866	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-21919	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-49940	+	AK128205 TSC_hg19_v1_chr15_+_75491259	153399	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	156365	+	BC110367 TSC_hg19_v1_chr15_+_75494233	156386	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chr2	18559428	18559539	reg1027196.p1	5.527	+	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	-499529	+	NM_001105569	-561698	+	TSC_hg19_v1_chr2_+_17935407 CR936783 NM_001130009 AK093631 AX748233	-624072	+	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	182433	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	211327	-	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	998896	-	AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_001105569|MSGN1|343930|mesogenin 1##CR936783|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##NM_001130009|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK093631|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)	0.99288	CTCF.p2:15:0.993
chr4	74122992	74123110	reg1025492.p1	5.527	+	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	-34272	-	BC101684 BC143642 TSC_hg19_v1_chr4_-_73935431 AK096310 AY957564 AY957565 BC071812 NM_173827	-187608	-	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	-688560	-	TSC_hg19_v1_chr4_-_74124365 AB527094	1308	-	TSC_hg19_v1_chr4_-_74124513 BC043394 BC004173 AF308285 NM_032217 NM_198889 AK307581	1434	-	NM_000477 TSC_hg19_v1_chr4_+_74270005 AK292755 AK298461 AK308044 AK314794 BC034023 BC035969 BC036003 BC041789 AK298437 BC034026 BC039235 CR749331 V00494 AF542069 AY960291 AY358313 DQ986150 AY544124 AY550967 DQ891414 DQ894588 AF190168 AY728024 CU690238	146956	+	BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17##BC101684|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC143642|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK096310|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957564|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957565|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC071812|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_173827|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC043394|ANKRD17|26057|ankyrin repeat domain 17##BC004173|ANKRD17|26057|ankyrin repeat domain 17##AF308285|ANKRD17|26057|ankyrin repeat domain 17##NM_032217|ANKRD17|26057|ankyrin repeat domain 17##NM_198889|ANKRD17|26057|ankyrin repeat domain 17##AK307581|ANKRD17|26057|ankyrin repeat domain 17##NM_000477|ALB|213|albumin##AK292755|ALB|213|albumin##AK298461|ALB|213|albumin##AK308044|ALB|213|albumin##AK314794|ALB|213|albumin##BC034023|ALB|213|albumin##BC035969|ALB|213|albumin##BC036003|ALB|213|albumin##BC041789|ALB|213|albumin##AK298437|ALB|213|albumin##BC034026|ALB|213|albumin##BC039235|ALB|213|albumin##CR749331|ALB|213|albumin##V00494|ALB|213|albumin##AF542069|ALB|213|albumin##AY960291|ALB|213|albumin##AY358313|ALB|213|albumin##DQ986150|ALB|213|albumin##AY544124|ALB|213|albumin##AY550967|ALB|213|albumin##DQ891414|ALB|213|albumin##DQ894588|ALB|213|albumin##AF190168|ALB|213|albumin##AY728024|ALB|213|albumin	0.0	
chr1	181059276	181059384	reg1023726.p1	5.526	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-1465	+	NM_016545	-1693	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-56180	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	393370	+	BC137223 BC137224 AK128654 NM_001009992	971467	-	TSC_hg19_v1_chr1_-_182354649 AK301600	1295352	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.018797	
chr12	66539050	66539173	reg1025386.p1	5.526	+	TSC_hg19_v1_chr12_-_66524536 BC070232 BC006002 BC107780 AK091568 AX747065 NM_032338	-14586	-	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	-320098	+	TSC_hg19_v1_chr12_+_66218605 AK311399	-320504	+	AB464309 TSC_hg19_v1_chr12_-_66563773 AF182414 AF161526 BC020613 AF113127 AK301359 AF182041 AK075069 AK225158 BC070366 BC052273 BC094852	24643	-	TSC_hg19_v1_chr12_-_66563806 BC004401 NM_016056	24691	-	TSC_hg19_v1_chr12_+_66582993 BC029493 NM_001142523 NM_007199 BC047399 AK314040 BC057800	43847	+	BC070232|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC006002|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC107780|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AK091568|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##NM_032338|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AF182414|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF161526|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC020613|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF113127|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF182041|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK075069|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK225158|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC070366|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC052273|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC094852|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC004401|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##NM_016056|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC029493|IRAK3|11213|interleukin-1 receptor-associated kinase 3##NM_001142523|IRAK3|11213|interleukin-1 receptor-associated kinase 3##NM_007199|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC047399|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AK314040|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC057800|IRAK3|11213|interleukin-1 receptor-associated kinase 3	0.143748	
chr17	28663469	28663649	reg1015672.p1	5.526	+	AK290266 BC137201 BC137202 AY358153 NM_206832 AK172838	-2497	-	NM_000386 TSC_hg19_v1_chr17_-_28619220	-44356	-	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	-44600	-	TSC_hg19_v1_chr17_+_28705953 NM_001304 BC051702 BC045549 BC054116	42380	+	TSC_hg19_v1_chr17_+_28705963 D85390 BC045624	42407	+	TSC_hg19_v1_chr17_+_28705984 U65090 AB385118	42430	+	AK290266|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##BC137201|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##BC137202|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##AY358153|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##NM_206832|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##AK172838|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##NM_000386|BLMH|642|bleomycin hydrolase##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase##NM_001304|CPD|1362|carboxypeptidase D##BC051702|CPD|1362|carboxypeptidase D##BC045549|CPD|1362|carboxypeptidase D##BC054116|CPD|1362|carboxypeptidase D##D85390|CPD|1362|carboxypeptidase D##BC045624|CPD|1362|carboxypeptidase D##U65090|CPD|1362|carboxypeptidase D	0.0	
chr4	186942869	186942976	reg1022666.p2	5.526	+	NM_021069	-65053	-	AK295742 AK056628 BC035329 AB018320 TSC_hg19_v1_chr4_-_186877527	-65450	-	AK225327 AF049884 TSC_hg19_v1_chr4_-_186733388 NM_003603 NM_001145670	-209532	-	BC017954 NM_003265 AK314208 BC068487 BC094737 TSC_hg19_v1_chr4_+_186990309 BC059372 BC096333 BC096334 BC096335 DQ445682 U88879	47407	+	NM_015398 TSC_hg19_v1_chr4_+_187065998 BC142992 BC110816	123123	+	NM_001006655 AF173894	127436	+	NM_021069|SORBS2|8470|sorbin and SH3 domain containing 2##AK295742|SORBS2|8470|sorbin and SH3 domain containing 2##AK056628|SORBS2|8470|sorbin and SH3 domain containing 2##BC035329|SORBS2|8470|sorbin and SH3 domain containing 2##AB018320|SORBS2|8470|sorbin and SH3 domain containing 2##AK225327|SORBS2|8470|sorbin and SH3 domain containing 2##AF049884|SORBS2|8470|sorbin and SH3 domain containing 2##NM_003603|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145670|SORBS2|8470|sorbin and SH3 domain containing 2##BC017954|TLR3|7098|toll-like receptor 3##NM_003265|TLR3|7098|toll-like receptor 3##AK314208|TLR3|7098|toll-like receptor 3##BC068487|TLR3|7098|toll-like receptor 3##BC094737|TLR3|7098|toll-like receptor 3##BC059372|TLR3|7098|toll-like receptor 3##BC096333|TLR3|7098|toll-like receptor 3##BC096334|TLR3|7098|toll-like receptor 3##BC096335|TLR3|7098|toll-like receptor 3##DQ445682|TLR3|7098|toll-like receptor 3##U88879|TLR3|7098|toll-like receptor 3##NM_015398|FAM149A|25854|family with sequence similarity 149, member A##BC142992|FAM149A|25854|family with sequence similarity 149, member A##BC110816|FAM149A|25854|family with sequence similarity 149, member A##NM_001006655|FAM149A|25854|family with sequence similarity 149, member A##AF173894|FAM149A|25854|family with sequence similarity 149, member A	0.0	
chr10	118204172	118204309	reg1026484.p2	5.525	+	AL833418 BC117224 NM_001011709 HQ258260	-16788	+	BC044830 NM_198515	-120301	+	AF038421 NM_005264 TSC_hg19_v1_chr10_-_118033147	-171172	-	NM_000936 AK313941 J05125 BC007025 BC014309 CU676961 M93285	101275	+	BC005233 CR749596 CR749299 CR749524 M93283 NM_006229 AK307063 AK130236 BC025784 CU675059	146315	+	TSC_hg19_v1_chr10_+_118380464 AK291492 AK307745 AK308508 AK308511 AK308521 NM_005396	176219	+	AL833418|PNLIPRP3|119548|pancreatic lipase-related protein 3##BC117224|PNLIPRP3|119548|pancreatic lipase-related protein 3##NM_001011709|PNLIPRP3|119548|pancreatic lipase-related protein 3##HQ258260|PNLIPRP3|119548|pancreatic lipase-related protein 3##BC044830|C10orf96|374355|chromosome 10 open reading frame 96##NM_198515|C10orf96|374355|chromosome 10 open reading frame 96##AF038421|GFRA1|2674|GDNF family receptor alpha 1##NM_005264|GFRA1|2674|GDNF family receptor alpha 1##NM_000936|PNLIP|5406|pancreatic lipase##AK313941|PNLIP|5406|pancreatic lipase##J05125|PNLIP|5406|pancreatic lipase##BC007025|PNLIP|5406|pancreatic lipase##BC014309|PNLIP|5406|pancreatic lipase##M93285|PNLIP|5406|pancreatic lipase##BC005233|PNLIPRP1|5407|pancreatic lipase-related protein 1##CR749596|PNLIPRP1|5407|pancreatic lipase-related protein 1##CR749299|PNLIPRP1|5407|pancreatic lipase-related protein 1##CR749524|PNLIPRP1|5407|pancreatic lipase-related protein 1##M93283|PNLIPRP1|5407|pancreatic lipase-related protein 1##NM_006229|PNLIPRP1|5407|pancreatic lipase-related protein 1##AK307063|PNLIPRP1|5407|pancreatic lipase-related protein 1##AK130236|PNLIPRP1|5407|pancreatic lipase-related protein 1##BC025784|PNLIPRP1|5407|pancreatic lipase-related protein 1##AK291492|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK307745|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308508|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308511|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308521|PNLIPRP2|5408|pancreatic lipase-related protein 2##NM_005396|PNLIPRP2|5408|pancreatic lipase-related protein 2	0.997001	CTCF.p2:-15:0.997
chr1	13106583	13106718	reg1027624.p1	5.525	+	NM_001100631 AB464060	-71105	+	BC101342 NM_001010889	-99245	-	BC144565 NM_001012277	-129172	+	BC130274 BC130276 BC101344 NM_001013407	11092	-	BC144551 NM_001136561	77675	-	AB464060 NM_001100631 NM_001013692	225027	-	NM_001100631|PRAMEF22|653606|PRAME family member 22##BC101342|PRAMEF6|440561|PRAME family member 6##NM_001010889|PRAMEF6|440561|PRAME family member 6##BC144565|PRAMEF7|441871|PRAME family member 7##NM_001012277|PRAMEF7|441871|PRAME family member 7##BC130274|PRAMEF5|343068|PRAME family member 5##BC130276|PRAMEF5|343068|PRAME family member 5##BC101344|PRAMEF5|343068|PRAME family member 5##NM_001013407|PRAMEF5|343068|PRAME family member 5##BC144551|LOC440563|440563|heterogeneous nuclear ribonucleoprotein C-like##NM_001136561|LOC440563|440563|heterogeneous nuclear ribonucleoprotein C-like##NM_001100631|PRAMEF22|653606|PRAME family member 22##NM_001013692|PRAMEF3|401940|PRAME family member 3	1.992576	CTCF.p2:-33:0.999	CTCF.p2:46:0.993
chr14	94442524	94442705	reg1024912.p2	5.525	+	AB056723 NM_016150	-18848	-	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	-48906	+	NM_001207071 NM_138344 AK093387 AX748092	-57366	+	AK303686 TSC_hg19_v1_chr14_-_94442905	294	-	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	462	-	TSC_hg19_v1_chr14_+_94492685 BC009615 BC068058 NM_023112	50089	+	AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2##BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	0.0	
chr15	52180901	52181032	reg1029750.p1	5.525	+	TSC_hg19_v1_chr15_+_52121876 BX647277 AF177171 BC020542	-58947	+	TSC_hg19_v1_chr15_+_52121827 NM_014547 AK312569	-59139	+	TSC_hg19_v1_chr15_+_52043793 NM_001142885 NM_014548 BC036184 BC064961 BC052749 AF177169 AK293823 AK292733	-137143	+	TSC_hg19_v1_chr15_+_52201590 AK025704	20644	+	TSC_hg19_v1_chr15_-_52263976 BC018147 NM_138792 AK055762 AK297972 AY302186	82996	-	TSC_hg19_v1_chr15_+_52311425 NM_002748	130453	+	BX647277|TMOD3|29766|tropomodulin 3 (ubiquitous)##AF177171|TMOD3|29766|tropomodulin 3 (ubiquitous)##BC020542|TMOD3|29766|tropomodulin 3 (ubiquitous)##NM_014547|TMOD3|29766|tropomodulin 3 (ubiquitous)##AK312569|TMOD3|29766|tropomodulin 3 (ubiquitous)##NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)##NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)##BC036184|TMOD2|29767|tropomodulin 2 (neuronal)##BC064961|TMOD2|29767|tropomodulin 2 (neuronal)##AF177169|TMOD2|29767|tropomodulin 2 (neuronal)##AK293823|TMOD2|29767|tropomodulin 2 (neuronal)##AK292733|TMOD2|29767|tropomodulin 2 (neuronal)##AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)##BC018147|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##NM_138792|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK055762|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK297972|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AY302186|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##NM_002748|MAPK6|5597|mitogen-activated protein kinase 6	0.995955	CTCF.p2:5:0.996
chr16	66308469	66308551	reg1025343.p1	5.525	+	TSC_hg19_v1_chr16_-_65155987 AK297377	-1152516	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	-1152542	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	-1152608	-	NM_001795 TSC_hg19_v1_chr16_+_66400538	92023	+	TSC_hg19_v1_chr16_+_66400559 U84722	92050	+	AK300461 TSC_hg19_v1_chr16_+_66400593 X59796 AK300299 AB209908 AB035304 BC096363 BC096364 BC096365 BC117520	92092	+	AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	0.997211	CTCF.p2:-4:0.997
chr4	119604240	119604343	reg1023809.p2	5.525	+	TSC_hg19_v1_chr4_+_119512929 AK024248	-91357	+	TSC_hg19_v1_chr4_-_119273910 AJ001531 BC007761 NM_003619	-330366	-	TSC_hg19_v1_chr4_+_119199912 BC017993 BC039555	-404374	+	TSC_hg19_v1_chr4_+_119606557 AK055555 AB046847 BC006565 BC007449 NM_020961 AB384254 CU675451	2320	+	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	152936	-	TSC_hg19_v1_chr4_-_119757290 NM_014822	153050	-	AK024248|LOC729218|729218|uncharacterized LOC729218##AJ001531|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC007761|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##NM_003619|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC017993|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##BC039555|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##AK055555|METTL14|57721|methyltransferase like 14##AB046847|METTL14|57721|methyltransferase like 14##BC006565|METTL14|57721|methyltransferase like 14##BC007449|METTL14|57721|methyltransferase like 14##NM_020961|METTL14|57721|methyltransferase like 14##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##NM_014822|SEC24D|9871|SEC24 family, member D (S. cerevisiae)	0.06233	
chr6	37506229	37506300	reg1000242.p2	5.525	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-38568	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-38612	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-102827	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	159442	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	281026	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	281426	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.013623	
chr6	41301793	41301974	reg1022796.p1	5.525	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-47459	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-105815	+	AF534824 AK023755 BC125078 BC125079 AY358171 NM_024807	-132960	-	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	1683	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	212276	+	TSC_hg19_v1_chr6_+_41514342 BC052803	212454	+	DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##AF534824|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AK023755|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125078|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125079|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AY358171|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_024807|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4	0.141209	
chr7	72538159	72538272	reg1027220.p1	5.525	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-112973	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-141341	+	TSC_hg19_v1_chr7_+_72395623 AK123814 AB289621	-142590	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	30816	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	184609	-	AK057366 AY081948 AY081949 NM_178125	203869	-	BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##AK123814|POM121|9883|POM121 membrane glycoprotein##AB289621|POM121|9883|POM121 membrane glycoprotein##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50	0.0	
chr11	41222873	41222964	reg1019640.p2	5.524	+	AB046800 NM_020929	-907255	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-908324	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-4603116	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	2110600	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	2110646	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	2110722	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.313558	CTCF.p2:-7:0.314
chr17	76352424	76352605	reg1022831.p1	5.524	+	BC042066 NM_001204210 NM_001204211 NM_001204212 BC148207	-125051	+	TSC_hg19_v1_chr17_+_76210353 AK223428 BC000784 BC034148 AY927772 BC002388 BC008718 HM625836 AB028869 AF077350 AK311917 BC065497 AB590059 AM393128 AB154416 AY830084 CR541740 DQ227257 DQ310375 DQ310376 DQ310377 DQ310378 DQ310379 DQ508249 DQ508245 DQ508246 DQ508247 DQ508248	-142117	+	NM_001012270 NM_001012271 NM_001168 TSC_hg19_v1_chr17_+_76210320 AK301793	-142215	+	TSC_hg19_v1_chr17_-_76356159 AK309756 AK314212 BC060858 NM_003955	3643	-	TSC_hg19_v1_chr17_+_76374729 AK316147 AK307874 AK296882 AK024529 AK225030 AK316405 BC108732 NM_024419 BC035662 AK297156 BC008903 BC015570 BC025951	22216	+	NM_173628	220961	-	BC042066|TMEM235|283999|transmembrane protein 235##NM_001204210|TMEM235|283999|transmembrane protein 235##NM_001204211|TMEM235|283999|transmembrane protein 235##NM_001204212|TMEM235|283999|transmembrane protein 235##BC148207|TMEM235|283999|transmembrane protein 235##AK223428|BIRC5|332|baculoviral IAP repeat containing 5##BC000784|BIRC5|332|baculoviral IAP repeat containing 5##BC034148|BIRC5|332|baculoviral IAP repeat containing 5##AY927772|BIRC5|332|baculoviral IAP repeat containing 5##BC008718|BIRC5|332|baculoviral IAP repeat containing 5##HM625836|BIRC5|332|baculoviral IAP repeat containing 5##AB028869|BIRC5|332|baculoviral IAP repeat containing 5##AF077350|BIRC5|332|baculoviral IAP repeat containing 5##AK311917|BIRC5|332|baculoviral IAP repeat containing 5##BC065497|BIRC5|332|baculoviral IAP repeat containing 5##AM393128|BIRC5|332|baculoviral IAP repeat containing 5##AB154416|BIRC5|332|baculoviral IAP repeat containing 5##AY830084|BIRC5|332|baculoviral IAP repeat containing 5##CR541740|BIRC5|332|baculoviral IAP repeat containing 5##DQ227257|BIRC5|332|baculoviral IAP repeat containing 5##DQ310375|BIRC5|332|baculoviral IAP repeat containing 5##DQ310376|BIRC5|332|baculoviral IAP repeat containing 5##DQ310377|BIRC5|332|baculoviral IAP repeat containing 5##DQ310378|BIRC5|332|baculoviral IAP repeat containing 5##DQ310379|BIRC5|332|baculoviral IAP repeat containing 5##DQ508249|BIRC5|332|baculoviral IAP repeat containing 5##DQ508245|BIRC5|332|baculoviral IAP repeat containing 5##DQ508246|BIRC5|332|baculoviral IAP repeat containing 5##DQ508247|BIRC5|332|baculoviral IAP repeat containing 5##DQ508248|BIRC5|332|baculoviral IAP repeat containing 5##NM_001012270|BIRC5|332|baculoviral IAP repeat containing 5##NM_001012271|BIRC5|332|baculoviral IAP repeat containing 5##NM_001168|BIRC5|332|baculoviral IAP repeat containing 5##AK301793|BIRC5|332|baculoviral IAP repeat containing 5##AK309756|SOCS3|9021|suppressor of cytokine signaling 3##AK314212|SOCS3|9021|suppressor of cytokine signaling 3##BC060858|SOCS3|9021|suppressor of cytokine signaling 3##NM_003955|SOCS3|9021|suppressor of cytokine signaling 3##AK316147|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK307874|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK296882|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK024529|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK225030|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK316405|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC108732|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_024419|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC035662|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK297156|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC008903|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC015570|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC025951|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17	0.0	
chr19	41250481	41250596	reg1025835.p1	5.524	+	TSC_hg19_v1_chr19_+_41223285 D38169	-27247	+	TSC_hg19_v1_chr19_+_41223016 BC060788 NM_025194 AJ290975	-27447	+	TSC_hg19_v1_chr19_-_41222801 AK022291 NM_024876	-27732	-	BC020262 NM_198476	5289	-	TSC_hg19_v1_chr19_-_41256350 AK298068 AK310021	5819	-	TSC_hg19_v1_chr19_-_41256396 BC090894 AK123126	5864	-	D38169|ITPKC|80271|inositol-trisphosphate 3-kinase C##BC060788|ITPKC|80271|inositol-trisphosphate 3-kinase C##NM_025194|ITPKC|80271|inositol-trisphosphate 3-kinase C##AJ290975|ITPKC|80271|inositol-trisphosphate 3-kinase C##AK022291|ADCK4|79934|aarF domain containing kinase 4##NM_024876|ADCK4|79934|aarF domain containing kinase 4##BC020262|C19orf54|284325|chromosome 19 open reading frame 54##NM_198476|C19orf54|284325|chromosome 19 open reading frame 54##AK298068|C19orf54|284325|chromosome 19 open reading frame 54##AK310021|C19orf54|284325|chromosome 19 open reading frame 54##BC090894|C19orf54|284325|chromosome 19 open reading frame 54##AK123126|C19orf54|284325|chromosome 19 open reading frame 54	0.724332	CTCF.p2:2:0.724
chr3	75772805	75772919	reg1026144.p1	5.524	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	-51376	+	AK000525 NM_001124759	-59379	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	-288713	-	NM_001128223	61392	-	TSC_hg19_v1_chr3_-_75834698 AK123776	61840	-	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	1316418	+	BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##NM_001128223|ZNF717|100131827|zinc finger protein 717##AK123776|ZNF717|100131827|zinc finger protein 717##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)	0.979649	CTCF.p2:-18:0.980
chr11	68671301	68671482	reg1026200.p2	5.523	+	TSC_hg19_v1_chr11_+_68671358 AK312565 L14754 BC025299 BC052278 BC080519	-26	+	TSC_hg19_v1_chr11_+_68671350 BC041808	-56	+	TSC_hg19_v1_chr11_+_68671318 NM_002180	-82	+	TSC_hg19_v1_chr11_+_68671384 AB208802 BC105088 BC105090 BC015666 BC062312 BC000290	11	+	AB154410 AB463856 AY427820 NM_198923	77063	-	BC016964 AK098317 TSC_hg19_v1_chr11_-_68780715 AK293469 AK075492 AK122669 AK131068 AK075450 NM_001098515 NM_145015	109367	-	AK312565|IGHMBP2|3508|immunoglobulin mu binding protein 2##L14754|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC025299|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC052278|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC080519|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC041808|IGHMBP2|3508|immunoglobulin mu binding protein 2##NM_002180|IGHMBP2|3508|immunoglobulin mu binding protein 2##AB208802|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC105088|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC105090|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC015666|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC062312|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC000290|IGHMBP2|3508|immunoglobulin mu binding protein 2##AB154410|MRGPRD|116512|MAS-related GPR, member D##AY427820|MRGPRD|116512|MAS-related GPR, member D##NM_198923|MRGPRD|116512|MAS-related GPR, member D##BC016964|MRGPRF|116535|MAS-related GPR, member F##AK098317|MRGPRF|116535|MAS-related GPR, member F##AK293469|MRGPRF|116535|MAS-related GPR, member F##AK075492|MRGPRF|116535|MAS-related GPR, member F##AK122669|MRGPRF|116535|MAS-related GPR, member F##AK131068|MRGPRF|116535|MAS-related GPR, member F##AK075450|MRGPRF|116535|MAS-related GPR, member F##NM_001098515|MRGPRF|116535|MAS-related GPR, member F##NM_145015|MRGPRF|116535|MAS-related GPR, member F	0.0	
chr17	30771309	30771427	reg1024421.p1	5.523	+	TSC_hg19_v1_chr17_+_30677187 AK291801 AK309979 BC008023 AB209215 BC000962 AB385067 BT007365 CU675901	-94123	+	TSC_hg19_v1_chr17_+_30677178 AK298950 AK226172	-94187	+	TSC_hg19_v1_chr17_+_30677175 BC002372 NM_001032293 NM_001098507 NM_003457	-94212	+	TSC_hg19_v1_chr17_+_30771493 AK290602	121	+	TSC_hg19_v1_chr17_+_30771512 AF001212 NM_002815	137	+	TSC_hg19_v1_chr17_+_30771521 AK300342	152	+	AK291801|ZNF207|7756|zinc finger protein 207##AK309979|ZNF207|7756|zinc finger protein 207##BC008023|ZNF207|7756|zinc finger protein 207##AB209215|ZNF207|7756|zinc finger protein 207##BC000962|ZNF207|7756|zinc finger protein 207##BT007365|ZNF207|7756|zinc finger protein 207##AK298950|ZNF207|7756|zinc finger protein 207##AK226172|ZNF207|7756|zinc finger protein 207##BC002372|ZNF207|7756|zinc finger protein 207##NM_001032293|ZNF207|7756|zinc finger protein 207##NM_001098507|ZNF207|7756|zinc finger protein 207##NM_003457|ZNF207|7756|zinc finger protein 207##AK290602|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##AF001212|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##NM_002815|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11##AK300342|PSMD11|5717|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	0.300528	CTCF.p2:-34:0.301
chrX	139049631	139049752	reg1025906.p1	5.523	+	BC137148 BC137149 NM_001013403	-2015	-	BC132728 BC132730 AJ580093 AJ580094 NM_001010986 NM_173694	-135276	-	AK302957 AK316416 NM_001099855 NM_001171876	-259337	-	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	537561	-	TSC_hg19_v1_chrX_+_139791923 AK054978	742236	+	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	816961	-	BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##BC132728|ATP11C|286410|ATPase, class VI, type 11C##BC132730|ATP11C|286410|ATPase, class VI, type 11C##AJ580093|ATP11C|286410|ATPase, class VI, type 11C##AJ580094|ATP11C|286410|ATPase, class VI, type 11C##NM_001010986|ATP11C|286410|ATPase, class VI, type 11C##NM_173694|ATP11C|286410|ATPase, class VI, type 11C##AK302957|MCF2|4168|MCF.2 cell line derived transforming sequence##AK316416|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001099855|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171876|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	0.879764	CTCF.p2:0:0.853
chr15	62599208	62599361	reg1028106.p1	5.522	+	NM_001007595	-141803	-	NM_207322 AF504646	-240096	+	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	-246670	-	TSC_hg19_v1_chr15_+_62682748 AB621808	83434	+	AF402000 NM_015059	340225	+	TSC_hg19_v1_chr15_+_63050761 BX648144 BX648146	451490	+	NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B##NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB621808|TLN2|83660|talin 2##AF402000|TLN2|83660|talin 2##NM_015059|TLN2|83660|talin 2##BX648144|TLN2|83660|talin 2##BX648146|TLN2|83660|talin 2	0.859407	CTCF.p2:13:0.859
chr6_ssto_hap7	2790631	2790722	reg1023191.p1	5.521	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.353191	CTCF.p2:5:0.353
chr15	54639775	54639956	reg1024464.p2	5.520	+	NM_001080534	-334765	+	AK096055 BX537884 NM_182758	-588018	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-1557671	-	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	849227	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	849314	-	AF125393 NM_183234 U57094 U38654 NM_004580	922672	-	NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family	0.0	
chr19	12237689	12237780	reg1024456.p2	5.520	+	AK128700 TSC_hg19_v1_chr19_+_12203111 AK124155	-34621	+	AK299732 AL832297 AK098117 NM_001136501 BC125185 BC125186 TSC_hg19_v1_chr19_+_12175767	-62094	+	NM_001080404	-73953	-	AL080125 AK023094 BC036714 TSC_hg19_v1_chr19_-_12251166 NM_001203250 NM_021143	13422	-	BC007868 AK096560 AK292455 NM_145233 TSC_hg19_v1_chr19_-_12267555	29812	-	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	36175	+	AK128700|ZNF788|388507|zinc finger family member 788##AK299732|ZNF844|284391|zinc finger protein 844##AL832297|ZNF844|284391|zinc finger protein 844##AK098117|ZNF844|284391|zinc finger protein 844##NM_001136501|ZNF844|284391|zinc finger protein 844##BC125185|ZNF844|284391|zinc finger protein 844##BC125186|ZNF844|284391|zinc finger protein 844##NM_001080404|ZNF878|729747|zinc finger protein 878##AL080125|ZNF20|7568|zinc finger protein 20##AK023094|ZNF20|7568|zinc finger protein 20##BC036714|ZNF20|7568|zinc finger protein 20##NM_001203250|ZNF20|7568|zinc finger protein 20##NM_021143|ZNF20|7568|zinc finger protein 20##BC007868|ZNF625|90589|zinc finger protein 625##AK096560|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##AK292455|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##NM_145233|ZNF625|90589|zinc finger protein 625##NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136	0.796228	CTCF.p2:-6:0.796
chr3	54408636	54408715	reg1018710.p1	5.520	+	TSC_hg19_v1_chr3_+_54156691 AF516696 NM_018398	-251984	+	BC137502 BC137505 TSC_hg19_v1_chr3_+_54156614	-252076	+	TSC_hg19_v1_chr3_-_53925897 AF537132 AK289594 BC013162 AK123406 AF085359 AF161415 NM_021237	-482746	-	BC074741 AF225421 NM_020678	553341	-	TSC_hg19_v1_chr3_-_55514935 CU687936 AB590996 BC074783	1106269	-	TSC_hg19_v1_chr3_-_55515377 L20861	1106700	-	AF516696|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##NM_018398|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137502|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137505|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##AF537132|SELK|58515|selenoprotein K##AK289594|SELK|58515|selenoprotein K##BC013162|SELK|58515|selenoprotein K##AK123406|SELK|58515|selenoprotein K##AF085359|SELK|58515|selenoprotein K##AF161415|SELK|58515|selenoprotein K##NM_021237|SELK|58515|selenoprotein K##BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A##L20861|WNT5A|7474|wingless-type MMTV integration site family, member 5A	0.602726	CTCF.p2:3:0.603
chr10	13394659	13394764	reg1021446.p2	5.519	+	TSC_hg19_v1_chr10_-_13390214 U34044 BC063816 GU954545 GU954546 GU954547 GU954548 GU954549 NM_001195602 NM_001195604 NM_012247	-4444	-	TSC_hg19_v1_chr10_-_13390036 AK301568 AK309829	-4672	-	TSC_hg19_v1_chr10_-_13342064 AF023462 BC029512 AF112977 BC021011 NM_006214	-52615	-	BC031618 AK097602 NM_001100912 NM_152751	150248	-	NM_003675 TSC_hg19_v1_chr10_+_13628948	234232	+	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	234276	+	U34044|SEPHS1|22929|selenophosphate synthetase 1##BC063816|SEPHS1|22929|selenophosphate synthetase 1##GU954545|SEPHS1|22929|selenophosphate synthetase 1##GU954546|SEPHS1|22929|selenophosphate synthetase 1##GU954547|SEPHS1|22929|selenophosphate synthetase 1##GU954548|SEPHS1|22929|selenophosphate synthetase 1##GU954549|SEPHS1|22929|selenophosphate synthetase 1##NM_001195602|SEPHS1|22929|selenophosphate synthetase 1##NM_001195604|SEPHS1|22929|selenophosphate synthetase 1##NM_012247|SEPHS1|22929|selenophosphate synthetase 1##AK301568|SEPHS1|22929|selenophosphate synthetase 1##AK309829|SEPHS1|22929|selenophosphate synthetase 1##AF023462|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC029512|PHYH|5264|phytanoyl-CoA 2-hydroxylase##AF112977|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC021011|PHYH|5264|phytanoyl-CoA 2-hydroxylase##NM_006214|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC031618|BEND7|222389|BEN domain containing 7##AK097602|BEND7|222389|BEN domain containing 7##NM_001100912|BEND7|222389|BEN domain containing 7##NM_152751|BEND7|222389|BEN domain containing 7##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)	0.987684	CTCF.p2:9:0.988
chr1	203840299	203840403	reg1024279.p1	5.519	+	TSC_hg19_v1_chr1_+_203830776 BC072433 AB464220 M15919	-9560	+	TSC_hg19_v1_chr1_+_203830735 AK312130 BC090951 NM_003094 M37716 X12466 BC002639 S60260	-9606	+	TSC_hg19_v1_chr1_+_203830730 AK307255 D28435 AK309140	-9624	+	TSC_hg19_v1_chr1_+_204042242 BC106038 AK304801 BC040649 NM_005686	201910	+	AB073608 AK302145 CU679603 AK293426 AK001623 TSC_hg19_v1_chr1_-_204121116 BC010082	280668	-	TSC_hg19_v1_chr1_-_204121144 NM_018208	280874	-	BC072433|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##M15919|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##AK312130|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##BC090951|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##NM_003094|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##M37716|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##X12466|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##BC002639|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##AK307255|SNRPE|6635|small nuclear ribonucleoprotein polypeptide E##BC106038|SOX13|9580|SRY (sex determining region Y)-box 13##AK304801|SOX13|9580|SRY (sex determining region Y)-box 13##BC040649|SOX13|9580|SRY (sex determining region Y)-box 13##NM_005686|SOX13|9580|SRY (sex determining region Y)-box 13##AB073608|ETNK2|55224|ethanolamine kinase 2##AK302145|ETNK2|55224|ethanolamine kinase 2##AK293426|ETNK2|55224|ethanolamine kinase 2##AK001623|ETNK2|55224|ethanolamine kinase 2##BC010082|ETNK2|55224|ethanolamine kinase 2##NM_018208|ETNK2|55224|ethanolamine kinase 2	0.18554	
chr16	3314248	3314359	reg1026668.p3	5.519	+	BC104941 BC104943 TSC_hg19_v1_chr16_+_3313780 AK295350 AK096958	-531	+	FJ785717 FJ785718 FJ785719 FJ785720 FJ785721 FJ785722 AB527834 BC101511 BC101537 Y14441 AK298660 AF018080 NM_000243 NM_001198536	-7697	-	Y14443 BC054005 NM_001145448 NM_198088 NM_001145446 NM_198087	-28896	-	TSC_hg19_v1_chr16_+_3333502 BC008805 NM_005741 AK312421	19140	+	TSC_hg19_v1_chr16_+_3333522 D88827	19221	+	TSC_hg19_v1_chr16_-_3355422 AK309406 NM_033208	41124	-	BC104941|FLJ39639|283876|uncharacterized protein FLJ39639##BC104943|FLJ39639|283876|uncharacterized protein FLJ39639##AK096958|FLJ39639|283876|uncharacterized protein FLJ39639##FJ785717|MEFV|4210|Mediterranean fever##FJ785718|MEFV|4210|Mediterranean fever##FJ785719|MEFV|4210|Mediterranean fever##FJ785720|MEFV|4210|Mediterranean fever##FJ785721|MEFV|4210|Mediterranean fever##FJ785722|MEFV|4210|Mediterranean fever##BC101511|MEFV|4210|Mediterranean fever##BC101537|MEFV|4210|Mediterranean fever##Y14441|MEFV|4210|Mediterranean fever##AK298660|MEFV|4210|Mediterranean fever##AF018080|MEFV|4210|Mediterranean fever##NM_000243|MEFV|4210|Mediterranean fever##NM_001198536|MEFV|4210|Mediterranean fever##Y14443|ZNF200|7752|zinc finger protein 200##BC054005|ZNF200|7752|zinc finger protein 200##NM_001145448|ZNF200|7752|zinc finger protein 200##NM_198088|ZNF200|7752|zinc finger protein 200##NM_001145446|ZNF200|7752|zinc finger protein 200##NM_198087|ZNF200|7752|zinc finger protein 200##BC008805|ZNF263|10127|zinc finger protein 263##NM_005741|ZNF263|10127|zinc finger protein 263##AK312421|ZNF263|10127|zinc finger protein 263##D88827|ZNF263|10127|zinc finger protein 263##NM_033208|TIGD7|91151|tigger transposable element derived 7	0.0	
chr20	33422315	33422481	reg1027250.p1	5.519	+	TSC_hg19_v1_chr20_-_33413434 BC069829 BC035676 NM_001242539 NM_014071 BC047886	-8984	-	AL122050 TSC_hg19_v1_chr20_+_33299806	-122605	+	AK027153 AK025412 TSC_hg19_v1_chr20_+_33299500	-122988	+	TSC_hg19_v1_chr20_-_33460644 AY138815 BC040030 AK124788 AK098355 BC101371 BC141843 BC101370 BC101372 AK299494 BC033745 NM_178026	38227	-	NM_001242393 TSC_hg19_v1_chr20_+_33462793 AK000162	40404	+	NM_001076552 NM_018677 TSC_hg19_v1_chr20_+_33464382 AK000188 AK025990 AK098026 AK293634	41963	+	BC069829|NCOA6|23054|nuclear receptor coactivator 6##BC035676|NCOA6|23054|nuclear receptor coactivator 6##NM_001242539|NCOA6|23054|nuclear receptor coactivator 6##NM_014071|NCOA6|23054|nuclear receptor coactivator 6##BC047886|NCOA6|23054|nuclear receptor coactivator 6##AL122050|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AK027153|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AK025412|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##AY138815|GGT7|2686|gamma-glutamyltransferase 7##BC040030|GGT7|2686|gamma-glutamyltransferase 7##AK124788|GGT7|2686|gamma-glutamyltransferase 7##BC101371|GGT7|2686|gamma-glutamyltransferase 7##BC141843|GGT7|2686|gamma-glutamyltransferase 7##BC101370|GGT7|2686|gamma-glutamyltransferase 7##BC101372|GGT7|2686|gamma-glutamyltransferase 7##AK299494|GGT7|2686|gamma-glutamyltransferase 7##BC033745|GGT7|2686|gamma-glutamyltransferase 7##NM_178026|GGT7|2686|gamma-glutamyltransferase 7##NM_001242393|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK000162|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##NM_001076552|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##NM_018677|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK000188|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK025990|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK098026|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK293634|ACSS2|55902|acyl-CoA synthetase short-chain family member 2	0.999631	CTCF.p2:-31:1.000
chr2	179284001	179284107	reg1026294.p1	5.519	+	TSC_hg19_v1_chr2_+_179278403 BX538254	-5650	+	AK093902 AX748360 NM_145739	-99084	+	TSC_hg19_v1_chr2_+_179059238 AB208898 NM_001201480 NM_001201481 NM_001201482 NM_032523 BC052259 AK300389 AF323728 AF392448	-224830	+	AY251164 NM_001139518 TSC_hg19_v1_chr2_-_179315397 NM_001139517	31364	-	BT007243 CR533525 EU831635 EU831719 AB590648 CU679369 TSC_hg19_v1_chr2_-_179315881 AF072860 AF083033 AK223107 BC009470 AK296019 AL136615 AK290601 NM_003690	31802	-	DQ365827 NM_001042702	32108	+	AK093902|OSBPL6|114880|oxysterol binding protein-like 6##NM_145739|OSBPL6|114880|oxysterol binding protein-like 6##AB208898|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201480|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201481|OSBPL6|114880|oxysterol binding protein-like 6##NM_001201482|OSBPL6|114880|oxysterol binding protein-like 6##NM_032523|OSBPL6|114880|oxysterol binding protein-like 6##BC052259|OSBPL6|114880|oxysterol binding protein-like 6##AK300389|OSBPL6|114880|oxysterol binding protein-like 6##AF323728|OSBPL6|114880|oxysterol binding protein-like 6##AF392448|OSBPL6|114880|oxysterol binding protein-like 6##AY251164|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_001139518|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_001139517|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##BT007243|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##CR533525|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##EU831635|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##EU831719|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AF072860|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AF083033|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK223107|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##BC009470|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK296019|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AL136615|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##AK290601|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##NM_003690|PRKRA|8575|protein kinase, interferon-inducible double stranded RNA dependent activator##DQ365827|DFNB59|494513|deafness, autosomal recessive 59##NM_001042702|DFNB59|494513|deafness, autosomal recessive 59	0.0	
chr21	43869892	43870072	reg1001217.p1	5.518	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-45970	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-53821	-	M12075 BC032811 NM_003225 X00474 X52003	-83360	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	46398	-	AJ269529 NM_018964	49759	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	64021	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.086649	
chr8	142114928	142115087	reg1026844.p2	5.518	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-103751	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-469383	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-593444	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	23730	+	AK128212 NM_001080431	123665	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	149183	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.044198	
chr12	6432499	6432676	reg1022853.p1	5.517	+	AK095373 NM_001144857	-10771	+	AK023741 NM_001144856	-12489	+	TSC_hg19_v1_chr12_+_6419886 BC040273	-12702	+	TSC_hg19_v1_chr12_-_6442970 AY182755	10407	-	AB590201 EU176385 EU176726 CU679633 EU927389 M60275 TSC_hg19_v1_chr12_-_6451145	18475	-	M58286 TSC_hg19_v1_chr12_-_6451171 M33294 AK056611 AK298729 AK304517 M63121 AK308061 AK291088 BC010140 AK315509 NM_001065	18633	-	AK095373|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144857|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AK023741|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144856|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC040273|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AY182755|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU176385|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU176726|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU927389|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M60275|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M58286|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M33294|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK056611|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK298729|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK304517|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M63121|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK308061|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK291088|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##BC010140|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK315509|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##NM_001065|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A	0.591949	CTCF.p2:-41:0.535
chr4	37803815	37803929	reg1025714.p1	5.517	+	TSC_hg19_v1_chr4_-_37687999 BC039540 AK075468 NM_001085399 NM_001085400	-115899	-	AK001879 NM_018302 AK225192	-218003	+	NM_001104629 BC037906	-348297	+	TSC_hg19_v1_chr4_+_37828307 NM_018290 AL136705 AK310927	24428	+	TSC_hg19_v1_chr4_+_37828339 AK223237 AK303374 AF109360 BC010087 AK001845 AK297752 CR457274 CU679607	24471	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	88917	+	BC039540|RELL1|768211|RELT-like 1##AK075468|RELL1|768211|RELT-like 1##NM_001085399|RELL1|768211|RELT-like 1##NM_001085400|RELL1|768211|RELT-like 1##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##NM_018290|PGM2|55276|phosphoglucomutase 2##AL136705|PGM2|55276|phosphoglucomutase 2##AK310927|PGM2|55276|phosphoglucomutase 2##AK223237|PGM2|55276|phosphoglucomutase 2##AK303374|PGM2|55276|phosphoglucomutase 2##AF109360|PGM2|55276|phosphoglucomutase 2##BC010087|PGM2|55276|phosphoglucomutase 2##AK001845|PGM2|55276|phosphoglucomutase 2##AK297752|PGM2|55276|phosphoglucomutase 2##CR457274|PGM2|55276|phosphoglucomutase 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1	0.963737	CTCF.p2:-17:0.899
chr7	37666128	37666234	reg1016056.p2	5.517	+	NM_001206480	-177287	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	-177626	-	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	-177713	-	BC043356 TSC_hg19_v1_chr7_+_37723380	57201	+	AB529245 AY288420 BC120951 BC120952 NM_181791	113814	+	BC036816 NM_016616	222017	+	NM_001206480|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1##AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##AY288420|GPR141|353345|G protein-coupled receptor 141##BC120951|GPR141|353345|G protein-coupled receptor 141##BC120952|GPR141|353345|G protein-coupled receptor 141##NM_181791|GPR141|353345|G protein-coupled receptor 141##BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)	0.0	
chr8	50947553	50947680	reg1030875.p1	5.517	+	AJ003030 NM_018967	-123020	+	NM_001007176 BC017981 AJ276240	-962707	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-1113706	-	EU170240 AY877349 NM_144651	1774337	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	1863986	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	1864111	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.503109	CTCF.p2:-5:0.503
chr9	19517688	19517796	reg1026675.p1	5.517	+	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-108739	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-137515	-	TSC_hg19_v1_chr9_-_19378815 BC035447	-138876	-	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	269209	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	1104706	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	1104754	-	AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##BC035447|RPS6|6194|ribosomal protein S6##BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	0.259642	CTCF.p2:-4:0.260
chr22	36784590	36784724	reg1020764.p2	5.516	+	TSC_hg19_v1_chr22_-_36784062 NM_002473	-599	-	TSC_hg19_v1_chr22_-_36784013 AK304840 AK291609 AB191263	-649	-	AK131080 TSC_hg19_v1_chr22_-_36783982 BC049849	-678	-	TSC_hg19_v1_chr22_-_36877665 BC013726 BC050610 AF480262 NM_012473 CR456601	93022	-	TSC_hg19_v1_chr22_-_36903081 BC027716 BC015726	118401	-	AK025714 AK225347 TSC_hg19_v1_chr22_-_36903088 AK315555 NM_024955 BC040351 NM_001102371	118460	-	NM_002473|MYH9|4627|myosin, heavy chain 9, non-muscle##AK304840|MYH9|4627|myosin, heavy chain 9, non-muscle##AK291609|MYH9|4627|myosin, heavy chain 9, non-muscle##AB191263|MYH9|4627|myosin, heavy chain 9, non-muscle##AK131080|MYH9|4627|myosin, heavy chain 9, non-muscle##BC049849|MYH9|4627|myosin, heavy chain 9, non-muscle##BC013726|TXN2|25828|thioredoxin 2##BC050610|TXN2|25828|thioredoxin 2##AF480262|TXN2|25828|thioredoxin 2##NM_012473|TXN2|25828|thioredoxin 2##CR456601|TXN2|25828|thioredoxin 2##BC027716|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC015726|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	0.0	
chr3	114888791	114888926	reg1021870.p1	5.516	+	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	-22744	-	BC090936 NM_001164343	-98618	-	AK225788 NM_001164344 NM_001164345	-410738	-	NM_001130064 NM_002045	453292	+	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	453561	+	AK315286 TSC_hg19_v1_chr3_-_116164338	1275473	-	BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##BC090936|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164343|ZBTB20|26137|zinc finger and BTB domain containing 20##AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AK315286|LSAMP|4045|limbic system-associated membrane protein	0.98888	CTCF.p2:-6:0.989
chr3	81292176	81292286	reg1028105.p1	5.516	+	NM_002941	-1475173	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-2223644	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-2625246	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	518466	-	TSC_hg19_v1_chr3_-_81810798 AK312245	518567	-	TSC_hg19_v1_chr3_-_81810802 AK297939	518574	-	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.625992	CTCF.p2:-3:0.626
chr6	150259225	150259322	reg1025270.p1	5.516	+	AY172580 BC096719 BC098152 AY172579 NM_001001788 AK310157	-15073	-	AY359075 NM_001243328	-42079	-	AY054974 AY176317 AY252119 EF489426 AF359243 BC101976 BC103694 AY069961 NM_001243325 NM_001243327 NM_139165	-47171	-	AK299895 AB052906 NM_025217 TSC_hg19_v1_chr6_+_150263162 AX772820 BC034689 AY358665 AF304378 AY026825 CU689938	3891	+	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	25889	+	BC131600 AB528849 AY039682 NM_130900	87360	-	AY172580|RAET1G|353091|retinoic acid early transcript 1G##BC096719|RAET1G|353091|retinoic acid early transcript 1G##BC098152|RAET1G|353091|retinoic acid early transcript 1G##AY172579|RAET1G|353091|retinoic acid early transcript 1G##NM_001001788|RAET1G|353091|retinoic acid early transcript 1G##AK310157|RAET1G|353091|retinoic acid early transcript 1G##AY359075|RAET1E|135250|retinoic acid early transcript 1E##NM_001243328|RAET1E|135250|retinoic acid early transcript 1E##AY054974|RAET1E|135250|retinoic acid early transcript 1E##AY176317|RAET1E|135250|retinoic acid early transcript 1E##AY252119|RAET1E|135250|retinoic acid early transcript 1E##EF489426|RAET1E|135250|retinoic acid early transcript 1E##AF359243|RAET1E|135250|retinoic acid early transcript 1E##BC101976|RAET1E|135250|retinoic acid early transcript 1E##BC103694|RAET1E|135250|retinoic acid early transcript 1E##AY069961|RAET1E|135250|retinoic acid early transcript 1E##NM_001243325|RAET1E|135250|retinoic acid early transcript 1E##NM_001243327|RAET1E|135250|retinoic acid early transcript 1E##NM_139165|RAET1E|135250|retinoic acid early transcript 1E##AK299895|ULBP2|80328|UL16 binding protein 2##AB052906|ULBP2|80328|UL16 binding protein 2##NM_025217|ULBP2|80328|UL16 binding protein 2##AX772820|ULBP2|80328|UL16 binding protein 2##BC034689|ULBP2|80328|UL16 binding protein 2##AY358665|ULBP2|80328|UL16 binding protein 2##AF304378|ULBP2|80328|UL16 binding protein 2##AY026825|ULBP2|80328|UL16 binding protein 2##AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L	0.017811	
chr11	76757196	76757338	reg1026233.p2	5.515	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	-11808	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	-185274	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	-185335	+	TSC_hg19_v1_chr11_+_76778017 BC018123 NM_004055 AK128124 AK313132 AK310978 AK094150 AB209087	20760	+	CU686775 BC069115 BC069365 NM_006189	56617	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	82061	+	NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##BC018123|CAPN5|726|calpain 5##NM_004055|CAPN5|726|calpain 5##AK128124|CAPN5|726|calpain 5##AK313132|CAPN5|726|calpain 5##AK310978|CAPN5|726|calpain 5##AK094150|CAPN5|726|calpain 5##AB209087|CAPN5|726|calpain 5##BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA	1.046815	CTCF.p2:20:0.992
chr18	47471197	47471313	reg1026220.p1	5.515	+	TSC_hg19_v1_chr18_-_47376221 BC033527	-95066	-	TSC_hg19_v1_chr18_+_47340396 AK123464	-130864	+	TSC_hg19_v1_chr18_-_47340253 AK054673 NM_006111 AK314462	-130985	-	AB384567 AB032945 TSC_hg19_v1_chr18_-_47721518 AB290160 BC032511 NM_001080467	250117	-	AB527886 BC030606 NM_145020 AK302114	321577	-	AF078830 AF078831 AF078832 AF078833 EF488685 AB527669 NM_001204151	335118	-	BC033527|MYO5B|4645|myosin VB##AK054673|ACAA2|10449|acetyl-CoA acyltransferase 2##NM_006111|ACAA2|10449|acetyl-CoA acyltransferase 2##AK314462|ACAA2|10449|acetyl-CoA acyltransferase 2##AB032945|MYO5B|4645|myosin VB##AB290160|MYO5B|4645|myosin VB##BC032511|MYO5B|4645|myosin VB##NM_001080467|MYO5B|4645|myosin VB##BC030606|CCDC11|220136|coiled-coil domain containing 11##NM_145020|CCDC11|220136|coiled-coil domain containing 11##AK302114|CCDC11|220136|coiled-coil domain containing 11##AF078830|MBD1|4152|methyl-CpG binding domain protein 1##AF078831|MBD1|4152|methyl-CpG binding domain protein 1##AF078832|MBD1|4152|methyl-CpG binding domain protein 1##AF078833|MBD1|4152|methyl-CpG binding domain protein 1##EF488685|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204151|MBD1|4152|methyl-CpG binding domain protein 1	0.13239	
chr6_qbl_hap6	3644270	3644337	reg1026932.p1	5.515	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.101968	
chr8	9008032	9008212	reg1000637.p2	5.515	+	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	-147617	+	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	-147757	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	-257184	-	TSC_hg19_v1_chr8_-_9008167 BC043388 AK024067 NM_024607	56	-	TSC_hg19_v1_chr8_-_9009055 AK096119 NM_001201329	978	-	TSC_hg19_v1_chr8_+_9413421 BC098394	405283	+	AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##BC043388|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK024067|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_024607|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK096119|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_001201329|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##BC098394|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	0.0	
chr11	125384411	125384496	reg1022291.p2	5.514	+	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	-18312	-	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	-349827	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	-349875	+	TSC_hg19_v1_chr11_+_125439294 NM_001007277 NM_004879	54842	+	TSC_hg19_v1_chr11_+_125439332 AB209820	54872	+	TSC_hg19_v1_chr11_+_125439353 AK223029 AK296620 AK301556	54902	+	U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_001007277|EI24|9538|etoposide induced 2.4 mRNA##NM_004879|EI24|9538|etoposide induced 2.4 mRNA##AB209820|EI24|9538|etoposide induced 2.4 mRNA##AK223029|EI24|9538|etoposide induced 2.4 mRNA##AK296620|EI24|9538|etoposide induced 2.4 mRNA##AK301556|EI24|9538|etoposide induced 2.4 mRNA	0.0	
chr2	88121224	88121347	reg1026754.p1	5.514	+	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	-73666	+	TSC_hg19_v1_chr2_+_87755060 AK312010	-366225	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	-366268	+	AK302429 NM_001078170	4000	-	CR749330 NM_001024457	164023	-	AF208845 AF217520 NM_016618 TSC_hg19_v1_chr2_-_88355252 BC015927	233974	-	BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1##AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##AK302429|RGPD2|729857|RANBP2-like and GRIP domain containing 2##NM_001078170|RGPD2|729857|RANBP2-like and GRIP domain containing 2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##AF208845|KRCC1|51315|lysine-rich coiled-coil 1##AF217520|KRCC1|51315|lysine-rich coiled-coil 1##NM_016618|KRCC1|51315|lysine-rich coiled-coil 1##BC015927|KRCC1|51315|lysine-rich coiled-coil 1	0.578776	CTCF.p2:2:0.579
chr10	73540571	73540737	reg1026417.p1	5.513	+	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	-7348	-	AK074172 NM_001168390	-43074	-	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	-61062	-	AY563165 AY563166 NM_001171933 NM_001171934	14873	+	AY563161 AY563162 NM_001171935 NM_001171936	30985	+	TSC_hg19_v1_chr10_-_73611004 BT006849 CR456746 CU678650 DQ893009 DQ896255 M60255 M60257 M60258 AB527305 BC001503 J03015 M32221 D00422 M81355 AB209776 BC004275 BC007612	70327	-	BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AY563165|CDH23|64072|cadherin-related 23##AY563166|CDH23|64072|cadherin-related 23##NM_001171933|CDH23|64072|cadherin-related 23##NM_001171934|CDH23|64072|cadherin-related 23##AY563161|CDH23|64072|cadherin-related 23##AY563162|CDH23|64072|cadherin-related 23##NM_001171935|CDH23|64072|cadherin-related 23##NM_001171936|CDH23|64072|cadherin-related 23##BT006849|PSAP|5660|prosaposin##CR456746|PSAP|5660|prosaposin##DQ893009|PSAP|5660|prosaposin##DQ896255|PSAP|5660|prosaposin##M60255|PSAP|5660|prosaposin##M60257|PSAP|5660|prosaposin##M60258|PSAP|5660|prosaposin##BC001503|PSAP|5660|prosaposin##J03015|PSAP|5660|prosaposin##M32221|PSAP|5660|prosaposin##D00422|PSAP|5660|prosaposin##M81355|PSAP|5660|prosaposin##AB209776|PSAP|5660|prosaposin##BC004275|PSAP|5660|prosaposin##BC007612|PSAP|5660|prosaposin	0.41619	CTCF.p2:-57:0.403
chr1	160324332	160324424	reg1026212.p2	5.513	+	NM_001098398 NM_004371 U24105	-10975	-	TSC_hg19_v1_chr1_+_160313175 AK299142 AY359120 BC100024 D87442	-11198	+	AF240468 NM_015331 TSC_hg19_v1_chr1_+_160313154 BC047621 AK314764 AK310741	-11264	+	M96739 AK313700 NM_005598 BC013789	12486	+	NM_020335 TSC_hg19_v1_chr1_+_160370394	46001	+	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	168651	-	NM_001098398|COPA|1314|coatomer protein complex, subunit alpha##NM_004371|COPA|1314|coatomer protein complex, subunit alpha##U24105|COPA|1314|coatomer protein complex, subunit alpha##AK299142|NCSTN|23385|nicastrin##AY359120|NCSTN|23385|nicastrin##BC100024|NCSTN|23385|nicastrin##D87442|NCSTN|23385|nicastrin##AF240468|NCSTN|23385|nicastrin##NM_015331|NCSTN|23385|nicastrin##BC047621|NCSTN|23385|nicastrin##AK314764|NCSTN|23385|nicastrin##AK310741|NCSTN|23385|nicastrin##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6	0.99845	CTCF.p2:-2:0.998
chr16	84077861	84078022	reg1025272.p1	5.513	+	NM_001080442	-2180	-	TSC_hg19_v1_chr16_+_84002230 AY299331 NM_019065 BC131615 AK127376	-75729	+	NM_182981 TSC_hg19_v1_chr16_+_83986844 AK290383 AY258068 AY037158 BC020434 BC032476 BC093687 BC113417	-91057	+	TSC_hg19_v1_chr16_-_84150441 AK291773 BC114555 BC114961 AK299067	72471	-	TSC_hg19_v1_chr16_-_84150449 BC026330 D42053 NM_003791	72575	-	TSC_hg19_v1_chr16_+_84150646 BC052334	72710	+	NM_001080442|SLC38A8|146167|solute carrier family 38, member 8##AY299331|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_019065|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##BC131615|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##AK127376|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_182981|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK290383|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY258068|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY037158|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC020434|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC032476|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC093687|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC113417|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK291773|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114555|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114961|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##AK299067|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC026330|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##D42053|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##NM_003791|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC052334|LOC729887|729887|uncharacterized LOC729887	0.637254	CTCF.p2:-5:0.637
chr2	176193952	176194065	reg1024525.p1	5.513	+	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	-147704	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	-161113	-	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	-323995	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	672967	-	NM_001080458	754681	-	TSC_hg19_v1_chr2_+_176957451 NM_000523 AB463753	763536	+	CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715##NM_001080458|EVX2|344191|even-skipped homeobox 2##NM_000523|HOXD13|3239|homeobox D13	0.722205	CTCF.p2:-2:0.722
chr4	68154803	68154912	reg1026656.p1	5.513	+	TSC_hg19_v1_chr4_-_66536182 AB209375	-1618660	-	AK307826 NM_004439 NM_182472	-1619205	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	-2879761	-	CU688992 TSC_hg19_v1_chr4_-_68411171	256266	-	TSC_hg19_v1_chr4_-_68411224 BC030695 BX648166 BC041117 AK307928 AK308170 M95724	256351	-	TSC_hg19_v1_chr4_-_68411282 NM_001812	256421	-	AB209375|EPHA5|2044|EPH receptor A5##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC030695|CENPC1|1060|centromere protein C 1##BX648166|CENPC1|1060|centromere protein C 1##BC041117|CENPC1|1060|centromere protein C 1##AK307928|CENPC1|1060|centromere protein C 1##AK308170|CENPC1|1060|centromere protein C 1##M95724|CENPC1|1060|centromere protein C 1##NM_001812|CENPC1|1060|centromere protein C 1	0.017887	
chr5	100235884	100236054	reg1025024.p1	5.513	+	AF529367 TSC_hg19_v1_chr5_+_99871306	-364699	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-364896	+	BC054860 BC117134 NM_001270 AF006513	-1973741	-	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	2959	-	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	1396139	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	1598664	-	AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1	0.064203	
chr5	140018693	140018870	reg1025362.p1	5.513	+	NM_001040021 NM_001174104 NM_001174105	-5496	-	NM_000591	-5747	-	M86511 TSC_hg19_v1_chr5_-_140012761 BC010507 AK313277 X13334	-6012	-	TSC_hg19_v1_chr5_+_140019047 NM_018502 AK301502 AK308722 AK097088 AK289495 BC001910	267	+	CR457016 TSC_hg19_v1_chr5_-_140027216 BC003674	8416	-	TSC_hg19_v1_chr5_-_140027241 AF077029 AK311095 NM_001185012 NM_002488	8519	-	NM_001040021|CD14|929|CD14 molecule##NM_001174104|CD14|929|CD14 molecule##NM_001174105|CD14|929|CD14 molecule##NM_000591|CD14|929|CD14 molecule##M86511|CD14|929|CD14 molecule##BC010507|CD14|929|CD14 molecule##AK313277|CD14|929|CD14 molecule##X13334|CD14|929|CD14 molecule##NM_018502|TMCO6|55374|transmembrane and coiled-coil domains 6##AK301502|TMCO6|55374|transmembrane and coiled-coil domains 6##AK308722|TMCO6|55374|transmembrane and coiled-coil domains 6##AK097088|TMCO6|55374|transmembrane and coiled-coil domains 6##AK289495|TMCO6|55374|transmembrane and coiled-coil domains 6##BC001910|TMCO6|55374|transmembrane and coiled-coil domains 6##CR457016|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##BC003674|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##AF077029|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##NM_001185012|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##NM_002488|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa	0.0	
chr5	21341426	21341527	reg1025119.p2	5.513	+	AK295087 BC031051 NM_001167667 NM_004934	-1353154	-	TSC_hg19_v1_chr5_+_17217804 AF039656	-4123636	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-4123864	+	TSC_hg19_v1_chr5_+_21459621 AK290693	118133	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	118172	+	TSC_hg19_v1_chr5_-_22212879 AK314800	871405	-	AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	1.005373	CTCF.p2:7:0.987
chr8	54793704	54793840	reg1024331.p2	5.513	+	TSC_hg19_v1_chr8_+_54793579 AF060877 HQ257937 BC015614	-210	+	TSC_hg19_v1_chr8_+_54793431 AK094503 BC063490 NM_003702 BC054867 BC018618 BC031328	-320	+	AY046538 NM_170587 AF366054 AF366055 AF366056	-29359	+	BT019995 CR542221 AB464783 AK290454 TSC_hg19_v1_chr8_-_54934848 X62585 BC072460 X57198 AK026617 AK297957 BX538034 AK297729	140995	-	TSC_hg19_v1_chr8_-_54934851 M81601	141082	-	TSC_hg19_v1_chr8_-_54934990 NM_006756 NM_201437	141247	-	AF060877|RGS20|8601|regulator of G-protein signaling 20##HQ257937|RGS20|8601|regulator of G-protein signaling 20##BC015614|RGS20|8601|regulator of G-protein signaling 20##AK094503|RGS20|8601|regulator of G-protein signaling 20##BC063490|RGS20|8601|regulator of G-protein signaling 20##NM_003702|RGS20|8601|regulator of G-protein signaling 20##BC018618|RGS20|8601|regulator of G-protein signaling 20##BC031328|RGS20|8601|regulator of G-protein signaling 20##AY046538|RGS20|8601|regulator of G-protein signaling 20##NM_170587|RGS20|8601|regulator of G-protein signaling 20##AF366054|RGS20|8601|regulator of G-protein signaling 20##AF366055|RGS20|8601|regulator of G-protein signaling 20##AF366056|RGS20|8601|regulator of G-protein signaling 20##BT019995|TCEA1|6917|transcription elongation factor A (SII), 1##CR542221|TCEA1|6917|transcription elongation factor A (SII), 1##AK290454|TCEA1|6917|transcription elongation factor A (SII), 1##X62585|TCEA1|6917|transcription elongation factor A (SII), 1##BC072460|TCEA1|6917|transcription elongation factor A (SII), 1##X57198|TCEA1|6917|transcription elongation factor A (SII), 1##AK026617|TCEA1|6917|transcription elongation factor A (SII), 1##AK297957|TCEA1|6917|transcription elongation factor A (SII), 1##BX538034|TCEA1|6917|transcription elongation factor A (SII), 1##AK297729|TCEA1|6917|transcription elongation factor A (SII), 1##M81601|TCEA1|6917|transcription elongation factor A (SII), 1##NM_006756|TCEA1|6917|transcription elongation factor A (SII), 1##NM_201437|TCEA1|6917|transcription elongation factor A (SII), 1	0.0	
chrX	15125644	15125751	reg1023421.p1	5.513	+	AK093075 AX747905 NM_001177475	-222285	+	NM_152581 TSC_hg19_v1_chrX_+_14891582 BC030641 AL832230 AK315781	-234141	+	TSC_hg19_v1_chrX_-_14891182 BC136558 BC136560 BC043596 BC055411 NM_001018113 NM_152633 AK091383 AX746948	-234522	-	BC001244 AK000643 BC013172 NM_001031739 NM_001168530 NM_024087	162535	-	AK292270 NM_001168531	162891	-	BX537853 NM_001012428	206983	-	AK093075|MOSPD2|158747|motile sperm domain containing 2##NM_001177475|MOSPD2|158747|motile sperm domain containing 2##NM_152581|MOSPD2|158747|motile sperm domain containing 2##BC030641|MOSPD2|158747|motile sperm domain containing 2##AL832230|MOSPD2|158747|motile sperm domain containing 2##AK315781|MOSPD2|158747|motile sperm domain containing 2##BC136558|FANCB|2187|Fanconi anemia, complementation group B##BC136560|FANCB|2187|Fanconi anemia, complementation group B##BC043596|FANCB|2187|Fanconi anemia, complementation group B##BC055411|FANCB|2187|Fanconi anemia, complementation group B##NM_001018113|FANCB|2187|Fanconi anemia, complementation group B##NM_152633|FANCB|2187|Fanconi anemia, complementation group B##AK091383|FANCB|2187|Fanconi anemia, complementation group B##BC001244|ASB9|140462|ankyrin repeat and SOCS box containing 9##AK000643|ASB9|140462|ankyrin repeat and SOCS box containing 9##BC013172|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_001031739|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_001168530|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_024087|ASB9|140462|ankyrin repeat and SOCS box containing 9##AK292270|ASB9|140462|ankyrin repeat and SOCS box containing 9##NM_001168531|ASB9|140462|ankyrin repeat and SOCS box containing 9##BX537853|ASB11|140456|ankyrin repeat and SOCS box containing 11##NM_001012428|ASB11|140456|ankyrin repeat and SOCS box containing 11	0.071295	
chr5	112258075	112258182	reg1022447.p1	5.512	+	CU688102 AY562243 BC065926 TSC_hg19_v1_chr5_-_112257925 BC000232 M74090 AK295436 AK298268 AK299902 AK300048 AK312522 M73547 AX775929 BX648005 NM_005669	-141	-	TSC_hg19_v1_chr5_+_112196983 AK311803 BC000186 X12791 AK313576 BC017830 BC010947 BC018669 AB587423	-61104	+	NM_001204193 NM_001204194 NM_001204196 NM_001204199 NM_003135 TSC_hg19_v1_chr5_+_112196975	-61199	+	TSC_hg19_v1_chr5_+_112312407 NM_001242377 NM_152624	54277	+	TSC_hg19_v1_chr5_+_112312506 AY135173 AY146650 BC017965 AK296361 AK090564 AX746512 BC064593 BC068042 CU687920	54400	+	M62397 AK096212 TSC_hg19_v1_chr5_-_112630346	372197	-	AY562243|REEP5|7905|receptor accessory protein 5##BC065926|REEP5|7905|receptor accessory protein 5##BC000232|REEP5|7905|receptor accessory protein 5##M74090|REEP5|7905|receptor accessory protein 5##AK295436|REEP5|7905|receptor accessory protein 5##AK298268|REEP5|7905|receptor accessory protein 5##AK299902|REEP5|7905|receptor accessory protein 5##AK312522|REEP5|7905|receptor accessory protein 5##BX648005|REEP5|7905|receptor accessory protein 5##NM_005669|REEP5|7905|receptor accessory protein 5##AK311803|SRP19|6728|signal recognition particle 19kDa##BC000186|SRP19|6728|signal recognition particle 19kDa##X12791|SRP19|6728|signal recognition particle 19kDa##BC017830|SRP19|6728|signal recognition particle 19kDa##BC010947|SRP19|6728|signal recognition particle 19kDa##BC018669|SRP19|6728|signal recognition particle 19kDa##NM_001204193|SRP19|6728|signal recognition particle 19kDa##NM_001204194|SRP19|6728|signal recognition particle 19kDa##NM_001204196|SRP19|6728|signal recognition particle 19kDa##NM_001204199|SRP19|6728|signal recognition particle 19kDa##NM_003135|SRP19|6728|signal recognition particle 19kDa##NM_001242377|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##NM_152624|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY135173|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY146650|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC017965|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK296361|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK090564|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC064593|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC068042|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##M62397|MCC|4163|mutated in colorectal cancers##AK096212|MCC|4163|mutated in colorectal cancers	0.0	
chr10	134448007	134448173	reg1024814.p1	5.511	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	-96778	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-189407	+	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	-237381	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	151416	-	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	307948	-	NM_001083909 TSC_hg19_v1_chr10_+_134901429 AK124728	453367	+	BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40##NM_001083909|GPR123|84435|G protein-coupled receptor 123##AK124728|GPR123|84435|G protein-coupled receptor 123	0.032528	
chr14	90405914	90406040	reg1026972.p2	5.511	+	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	-320382	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	-522567	-	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-527201	-	BC001787 BX247991 AK298930 AK094740 NM_145231	15083	-	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	16269	+	TSC_hg19_v1_chr14_+_90422278 AK001952 BC015474 AK315549 BX161451	16302	+	AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK001952|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC015474|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK315549|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BX161451|TDP1|55775|tyrosyl-DNA phosphodiesterase 1	0.984489	CTCF.p2:-4:0.984
chr16	11736412	11736532	reg1026248.p2	5.511	+	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	-55683	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	-56285	-	TSC_hg19_v1_chr16_+_11439315 BC013040	-297154	+	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	25826	+	TSC_hg19_v1_chr16_-_11836686 AK297094 BX648407 AK027646 NM_015914 BC002856 BC018635	100184	-	BC046363 BC036857 TSC_hg19_v1_chr16_-_11891096 AK091803 AX747194	154579	-	BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin##AK297094|TXNDC11|51061|thioredoxin domain containing 11##BX648407|TXNDC11|51061|thioredoxin domain containing 11##AK027646|TXNDC11|51061|thioredoxin domain containing 11##NM_015914|TXNDC11|51061|thioredoxin domain containing 11##BC002856|TXNDC11|51061|thioredoxin domain containing 11##BC018635|TXNDC11|51061|thioredoxin domain containing 11##BC046363|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC036857|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK091803|ZC3H7A|29066|zinc finger CCCH-type containing 7A	0.090356	
chr16	29827578	29827746	reg1021459.p2	5.511	+	TSC_hg19_v1_chr16_+_29827522 NM_024516	-146	+	TSC_hg19_v1_chr16_+_29823563 AK092265 AX747441 AL834185 BC053594	-4078	+	NM_145239 TSC_hg19_v1_chr16_+_29823510 AK292393 AK074572 AK225785 BC011405 AK098379	-4189	+	TSC_hg19_v1_chr16_+_29827809 BC003640 EF195235 CU678552	114	+	NM_005115 NM_017458 TSC_hg19_v1_chr16_+_29831736	4063	+	TSC_hg19_v1_chr16_+_29831782 AK301130 AK310168 AK298238 AJ291366 AJ291367 AK293302 AK302052 BC015623	4118	+	NM_024516|C16orf53|79447|chromosome 16 open reading frame 53##AK092265|PRRT2|112476|proline-rich transmembrane protein 2##AL834185|PRRT2|112476|proline-rich transmembrane protein 2##BC053594|PRRT2|112476|proline-rich transmembrane protein 2##NM_145239|PRRT2|112476|proline-rich transmembrane protein 2##AK292393|PRRT2|112476|proline-rich transmembrane protein 2##AK074572|PRRT2|112476|proline-rich transmembrane protein 2##AK225785|PRRT2|112476|proline-rich transmembrane protein 2##BC011405|PRRT2|112476|proline-rich transmembrane protein 2##AK098379|PRRT2|112476|proline-rich transmembrane protein 2##BC003640|C16orf53|79447|chromosome 16 open reading frame 53##EF195235|C16orf53|79447|chromosome 16 open reading frame 53##NM_005115|MVP|9961|major vault protein##NM_017458|MVP|9961|major vault protein##AK301130|MVP|9961|major vault protein##AK310168|MVP|9961|major vault protein##AK298238|MVP|9961|major vault protein##AJ291366|MVP|9961|major vault protein##AJ291367|MVP|9961|major vault protein##AK293302|MVP|9961|major vault protein##AK302052|MVP|9961|major vault protein##BC015623|MVP|9961|major vault protein	0.594356	CTCF.p2:34:0.594
chr18	71998792	71998896	reg1025148.p1	5.511	+	CR749350 NM_001174123	-15735	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	-39665	-	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	-183050	+	TSC_hg19_v1_chr18_-_72124545 NM_001044369	125685	-	TSC_hg19_v1_chr18_+_72163567 NM_018235	164614	+	TSC_hg19_v1_chr18_+_72163611 AK001692 AK300904 AK298309 BC001375	164771	+	CR749350|C18orf63|644041|chromosome 18 open reading frame 63##NM_001174123|C18orf63|644041|chromosome 18 open reading frame 63##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##NM_001044369|FAM69C|125704|family with sequence similarity 69, member C##NM_018235|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK001692|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK300904|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK298309|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##BC001375|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)	0.908229	CTCF.p2:-4:0.908
chr2	177005575	177005755	reg1003520.p2	5.511	+	NM_001199747 NM_001199746 NM_019558 BC038709 BC090853	-11135	+	BC044855 NM_014213 TSC_hg19_v1_chr2_+_176987450 X59372 AB463755	-18196	+	NM_002148 AK309451 BC069619 BC074760 X59373 AB464584 EU446483	-24139	+	NM_014621 X04706 AK313885 BC016763 TSC_hg19_v1_chr2_+_177016297 BC074797	10548	+	TSC_hg19_v1_chr2_+_177016337 AB464586	10684	+	BC005124 NM_006898	23139	+	NM_001199747|HOXD8|3234|homeobox D8##NM_001199746|HOXD8|3234|homeobox D8##NM_019558|HOXD8|3234|homeobox D8##BC038709|HOXD8|3234|homeobox D8##BC090853|HOXD8|3234|homeobox D8##BC044855|HOXD9|3235|homeobox D9##NM_014213|HOXD9|3235|homeobox D9##X59372|HOXD9|3235|homeobox D9##NM_002148|HOXD10|3236|homeobox D10##BC069619|HOXD10|3236|homeobox D10##BC074760|HOXD10|3236|homeobox D10##X59373|HOXD10|3236|homeobox D10##EU446483|HOXD10|3236|homeobox D10##NM_014621|HOXD4|3233|homeobox D4##X04706|HOXD4|3233|homeobox D4##AK313885|HOXD4|3233|homeobox D4##BC016763|HOXD4|3233|homeobox D4##BC074797|HOXD4|3233|homeobox D4##BC005124|HOXD3|3232|homeobox D3##NM_006898|HOXD3|3232|homeobox D3	0.0	
chr3	50265016	50265089	reg1005115.p2	5.511	+	TSC_hg19_v1_chr3_+_50242705 NM_006841 AK299677 BX537382 AK293801 AK313461 BC042875 U49082 AF244548	-22346	+	DQ426874 NM_000172 NM_144499 X15088 BC095505 AF493908	-35962	+	BC042914 NM_004186 U33920	-72146	+	TSC_hg19_v1_chr3_+_50273632 BC012138	8551	+	AK055574 TSC_hg19_v1_chr3_+_50273635	8585	+	TSC_hg19_v1_chr3_+_50273646 NM_002070	8593	+	NM_006841|SLC38A3|10991|solute carrier family 38, member 3##AK299677|SLC38A3|10991|solute carrier family 38, member 3##BX537382|SLC38A3|10991|solute carrier family 38, member 3##AK293801|SLC38A3|10991|solute carrier family 38, member 3##AK313461|SLC38A3|10991|solute carrier family 38, member 3##BC042875|SLC38A3|10991|solute carrier family 38, member 3##U49082|SLC38A3|10991|solute carrier family 38, member 3##AF244548|SLC38A3|10991|solute carrier family 38, member 3##NM_000172|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##NM_144499|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##X15088|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##BC095505|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##AF493908|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##BC042914|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##NM_004186|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##U33920|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##BC012138|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##AK055574|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2##NM_002070|GNAI2|2771|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2	0.05914	
chr4	115701512	115701617	reg1023429.p1	5.511	+	NM_003360 U30930	-158042	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-181981	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-800725	-	BC113075 BC012326 AK289670 AB036429 NM_022569	333417	-	AK074617 BC030831 NM_152402	2305169	-	TSC_hg19_v1_chr4_+_118954764 AY358852	3253207	+	NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.609058	CTCF.p2:-24:0.609
chr5	6167189	6167348	reg1025630.p2	5.511	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	-744359	+	TSC_hg19_v1_chr5_+_5422777 AK126937	-744493	+	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	-1026757	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	211382	-	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	281585	+	TSC_hg19_v1_chr5_+_6449114 AK057805	281921	+	AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1	0.0	
chr6	161413949	161414041	reg1025905.p2	5.511	+	AK094629 TSC_hg19_v1_chr6_-_161413451	-582	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-1137	+	TSC_hg19_v1_chr6_+_161412815 AF002715 NM_005922 NM_006724	-1181	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	281065	-	AK057286 NM_001080378 NM_152410 BC044227	1734174	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	1734732	-	BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AF002715|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_005922|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_006724|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.0	
chr8	13235321	13235449	reg1025084.p1	5.511	+	TSC_hg19_v1_chr8_-_13134056 AK025544	-101340	-	EU159200 EU159199 TSC_hg19_v1_chr8_-_13133968	-101423	-	AK289734 TSC_hg19_v1_chr8_-_12990794 DQ092382 AF026219 BC095415 NM_006094	-244609	-	BC054511 AK291682 AK024773 AK225098 AB051510 BC049842 NM_024767 NM_182643	136920	-	AK058131 NM_001007090 BC031245 AF394908 CU689130	189040	+	NM_139167	1860406	-	AK025544|DLC1|10395|deleted in liver cancer 1##AK289734|DLC1|10395|deleted in liver cancer 1##DQ092382|DLC1|10395|deleted in liver cancer 1##AF026219|DLC1|10395|deleted in liver cancer 1##BC095415|DLC1|10395|deleted in liver cancer 1##NM_006094|DLC1|10395|deleted in liver cancer 1##BC054511|DLC1|10395|deleted in liver cancer 1##AK291682|DLC1|10395|deleted in liver cancer 1##AK024773|DLC1|10395|deleted in liver cancer 1##AK225098|DLC1|10395|deleted in liver cancer 1##AB051510|DLC1|10395|deleted in liver cancer 1##BC049842|DLC1|10395|deleted in liver cancer 1##NM_024767|DLC1|10395|deleted in liver cancer 1##NM_182643|DLC1|10395|deleted in liver cancer 1##AK058131|C8orf48|157773|chromosome 8 open reading frame 48##NM_001007090|C8orf48|157773|chromosome 8 open reading frame 48##BC031245|C8orf48|157773|chromosome 8 open reading frame 48##AF394908|C8orf48|157773|chromosome 8 open reading frame 48##NM_139167|SGCZ|137868|sarcoglycan, zeta	0.999484	CTCF.p2:8:0.999
chrX	18874321	18874497	reg1024968.p1	5.511	+	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	-165365	+	AB464151 AF014459 DQ426892 NM_000330	-184205	-	BC036091 NM_001037343	-414066	+	TSC_hg19_v1_chrX_-_19002476 NM_000292	128053	-	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	266258	-	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	487673	+	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1##BC036091|CDKL5|6792|cyclin-dependent kinase-like 5##NM_001037343|CDKL5|6792|cyclin-dependent kinase-like 5##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1	0.0	
chr10	73829631	73829749	reg1024737.p2	5.510	+	TSC_hg19_v1_chr10_+_73723993 AB017915 NM_004273 AB012192	-105633	+	TSC_hg19_v1_chr10_-_73611059 NM_001042465 NM_001042466 NM_002778	-218599	-	AK299184 TSC_hg19_v1_chr10_-_73611043	-218647	-	AK292328 TSC_hg19_v1_chr10_-_73848270 AK294008 AK307091	18578	-	TSC_hg19_v1_chr10_-_73848286 AY358921	18592	-	TSC_hg19_v1_chr10_-_73848310 AJ001453	18650	-	AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_001042465|PSAP|5660|prosaposin##NM_001042466|PSAP|5660|prosaposin##NM_002778|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin##AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AY358921|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AJ001453|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	0.202043	CTCF.p2:-3:0.202
chr13	79630973	79631085	reg1027813.p1	5.510	+	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	-397736	-	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	-453306	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	-460747	+	BX648672 BC111697 BC111739 BC041655 NM_022118 TSC_hg19_v1_chr13_-_79979967 AK302871	348925	-	BC030806 TSC_hg19_v1_chr13_-_79980382	349354	-	TSC_hg19_v1_chr13_+_79980440 AK002196 BC034812	349422	+	AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##BX648672|RBM26|64062|RNA binding motif protein 26##BC111697|RBM26|64062|RNA binding motif protein 26##BC111739|RBM26|64062|RNA binding motif protein 26##BC041655|RBM26|64062|RNA binding motif protein 26##NM_022118|RBM26|64062|RNA binding motif protein 26##AK302871|RBM26|64062|RNA binding motif protein 26##BC030806|RBM26|64062|RNA binding motif protein 26##AK002196|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)##BC034812|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)	0.800646	CTCF.p2:11:0.801
chr16	31454266	31454441	reg1003337.p1	5.510	+	AK096248 NM_001136509	-7	-	DQ890561 DQ893723 M83308 BC029818 NM_005205	-14654	-	AK097160 AB208945 NM_005353 AK301028 AB384792 U37028	-49715	+	TSC_hg19_v1_chr16_+_31469624 AK295790	15204	+	TSC_hg19_v1_chr16_+_31470117 AK294897 AY217348 NM_001105247 NM_024742 BC014945	15902	+	TSC_hg19_v1_chr16_+_31470830 AK024430	16473	+	AK096248|ZNF843|283933|zinc finger protein 843##NM_001136509|ZNF843|283933|zinc finger protein 843##DQ890561|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##DQ893723|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##M83308|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##BC029818|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##NM_005205|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##AK097160|ITGAD|3681|integrin, alpha D##AB208945|ITGAD|3681|integrin, alpha D##NM_005353|ITGAD|3681|integrin, alpha D##AK301028|ITGAD|3681|integrin, alpha D##U37028|ITGAD|3681|integrin, alpha D##AK295790|ARMC5|79798|armadillo repeat containing 5##AK294897|ARMC5|79798|armadillo repeat containing 5##AY217348|ARMC5|79798|armadillo repeat containing 5##NM_001105247|ARMC5|79798|armadillo repeat containing 5##NM_024742|ARMC5|79798|armadillo repeat containing 5##BC014945|ARMC5|79798|armadillo repeat containing 5##AK024430|ARMC5|79798|armadillo repeat containing 5	0.0	
chr4	15964884	15964999	reg1024378.p2	5.510	+	AF361936 CU693032 DQ892062 DQ895256 AB529223 BC025720 AB021123 AY358978 NM_031950	-137	-	NM_005130	-24579	-	BC003628 M60047 BC008910 BC018852 AK291307 TSC_hg19_v1_chr4_-_15939972	-24981	-	NM_001145849 NM_001145850 NM_001145851 NM_001145852 NM_006017	112799	-	TSC_hg19_v1_chr4_-_16085325 AF117225	120390	-	NM_001145847 AK075411 BC012089 NM_001145848 TSC_hg19_v1_chr4_-_16085647 AK027420 AK226033	120683	-	AF361936|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ892062|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ895256|FGFBP2|83888|fibroblast growth factor binding protein 2##BC025720|FGFBP2|83888|fibroblast growth factor binding protein 2##AB021123|FGFBP2|83888|fibroblast growth factor binding protein 2##AY358978|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_031950|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_005130|FGFBP1|9982|fibroblast growth factor binding protein 1##BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1##M60047|FGFBP1|9982|fibroblast growth factor binding protein 1##BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1##BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1##AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1##NM_001145849|PROM1|8842|prominin 1##NM_001145850|PROM1|8842|prominin 1##NM_001145851|PROM1|8842|prominin 1##NM_001145852|PROM1|8842|prominin 1##NM_006017|PROM1|8842|prominin 1##AF117225|PROM1|8842|prominin 1##NM_001145847|PROM1|8842|prominin 1##AK075411|PROM1|8842|prominin 1##BC012089|PROM1|8842|prominin 1##NM_001145848|PROM1|8842|prominin 1##AK027420|PROM1|8842|prominin 1##AK226033|PROM1|8842|prominin 1	0.937882	CTCF.p2:3:0.938
chr4	171418431	171418576	reg1026756.p1	5.510	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-407089	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-407305	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-470998	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	1316141	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	2671449	+	BC043556 TSC_hg19_v1_chr4_-_174090314	2671807	-	BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.435788	CTCF.p2:10:0.436
chrX	49641497	49641624	reg1025051.p1	5.510	+	NM_007003 AK312039 AF275258 AJ005894 AK092503 AX747575	-47633	+	BC004861 AF058989 NM_003785	-180979	-	NM_001040663 NM_001468 BC005363 BC036094 BC069470	-277921	+	NM_001145073	2909	+	TSC_hg19_v1_chrX_+_49687274 AK092049 NM_001127898 NM_001127899 AK056560	45686	+	NM_000084 AK308089 TSC_hg19_v1_chrX_+_49832243 AK290940	190685	+	NM_007003|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK312039|PAGE4|9506|P antigen family, member 4 (prostate associated)##AF275258|PAGE4|9506|P antigen family, member 4 (prostate associated)##AJ005894|PAGE4|9506|P antigen family, member 4 (prostate associated)##AK092503|PAGE4|9506|P antigen family, member 4 (prostate associated)##BC004861|PAGE1|8712|P antigen family, member 1 (prostate associated)##AF058989|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_003785|PAGE1|8712|P antigen family, member 1 (prostate associated)##NM_001040663|GAGE1|2543|G antigen 1##NM_001468|GAGE1|2543|G antigen 1##BC005363|GAGE1|2543|G antigen 1##BC036094|GAGE1|2543|G antigen 1##BC069470|GAGE1|2543|G antigen 1##NM_001145073|USP27X|389856|ubiquitin specific peptidase 27, X-linked##AK092049|CLCN5|1184|chloride channel 5##NM_001127898|CLCN5|1184|chloride channel 5##NM_001127899|CLCN5|1184|chloride channel 5##AK056560|CLCN5|1184|chloride channel 5##NM_000084|CLCN5|1184|chloride channel 5##AK308089|CLCN5|1184|chloride channel 5##AK290940|CLCN5|1184|chloride channel 5	0.989998	CTCF.p2:-3:0.990
chr21	31836242	31836330	reg1024261.p1	5.509	+	BC104925 BC104927 AB096942 NM_181623	-23666	+	AB096941 BC131691 NM_181600	-33704	+	BC103965 NM_181622 AB096940	-38050	-	AJ457067 NM_181607 HQ258595 AB096943 BC126284 BC126286	16377	-	NM_181608 AB180041	23424	-	AF139541 NM_181609 AB096944 BC126280 BC126282	28010	-	BC104925|KRTAP15-1|254950|keratin associated protein 15-1##BC104927|KRTAP15-1|254950|keratin associated protein 15-1##AB096942|KRTAP15-1|254950|keratin associated protein 15-1##NM_181623|KRTAP15-1|254950|keratin associated protein 15-1##AB096941|KRTAP13-4|284827|keratin associated protein 13-4##BC131691|KRTAP13-4|284827|keratin associated protein 13-4##NM_181600|KRTAP13-4|284827|keratin associated protein 13-4##BC103965|KRTAP13-3|337960|keratin associated protein 13-3##NM_181622|KRTAP13-3|337960|keratin associated protein 13-3##AB096940|KRTAP13-3|337960|keratin associated protein 13-3##AJ457067|KRTAP19-1|337882|keratin associated protein 19-1##NM_181607|KRTAP19-1|337882|keratin associated protein 19-1##AB096943|KRTAP19-1|337882|keratin associated protein 19-1##BC126284|KRTAP19-1|337882|keratin associated protein 19-1##BC126286|KRTAP19-1|337882|keratin associated protein 19-1##NM_181608|KRTAP19-2|337969|keratin associated protein 19-2##AB180041|KRTAP19-2|337969|keratin associated protein 19-2##AF139541|KRTAP19-3|337970|keratin associated protein 19-3##NM_181609|KRTAP19-3|337970|keratin associated protein 19-3##AB096944|KRTAP19-3|337970|keratin associated protein 19-3##BC126280|KRTAP19-3|337970|keratin associated protein 19-3##BC126282|KRTAP19-3|337970|keratin associated protein 19-3	0.075259	
chr8	100404162	100404273	reg1024521.p1	5.509	+	TSC_hg19_v1_chr8_+_100025537 BC094749	-378627	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	-378705	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	-378722	+	TSC_hg19_v1_chr8_-_100905892 X13238	501662	-	TSC_hg19_v1_chr8_-_100905910 AK311791	501704	-	NM_004374	502024	-	BC094749|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##X13238|COX6C|1345|cytochrome c oxidase subunit VIc##AK311791|COX6C|1345|cytochrome c oxidase subunit VIc##NM_004374|COX6C|1345|cytochrome c oxidase subunit VIc	0.264183	
chr10	87898936	87899052	reg1025380.p1	5.508	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-1714299	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-1767376	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-1810600	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	227269	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	382500	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	382536	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.369147	CTCF.p2:4:0.369
chr11	101299779	101299888	reg1022672.p1	5.508	+	AK304853 TSC_hg19_v1_chr11_-_101000531 NM_000926	-299330	-	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	-300034	-	AK314174 AF247167 NM_032021	-437069	+	AJ006276 NM_004621	154825	-	TSC_hg19_v1_chr11_+_101785752 NM_020802 AK057230 BC036525 BC146807	485954	+	TSC_hg19_v1_chr11_+_101785949 AK309479 BX647415	486159	+	AK304853|PGR|5241|progesterone receptor##NM_000926|PGR|5241|progesterone receptor##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##AJ006276|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6##NM_004621|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6##NM_020802|KIAA1377|57562|KIAA1377##AK057230|KIAA1377|57562|KIAA1377##BC036525|KIAA1377|57562|KIAA1377##BC146807|KIAA1377|57562|KIAA1377##BX647415|KIAA1377|57562|KIAA1377	0.165168	
chr1	234748413	234748552	reg1023673.p3	5.508	+	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-3236	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-4624	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-4651	-	TSC_hg19_v1_chr1_-_234895746 AF193050	147292	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	543607	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	543749	-	BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.0	
chr15	40347012	40347193	reg1026341.p1	5.508	+	TSC_hg19_v1_chr15_+_40331506 AK127696	-15624	+	AB451391 CU690086 TSC_hg19_v1_chr15_-_40331370 X73459 BC071716 U07857 BC100031 BC035495 BC051006 AB061546 NM_003134	-15750	-	TSC_hg19_v1_chr15_+_40294764 AK074361	-52306	+	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	51184	-	BC104983 BC104985 BC069328 BC069505 NM_033503 AK024472	51508	-	TSC_hg19_v1_chr15_-_40401076 BC060783 BC070043 NM_001003940	53993	-	AK127696|LOC100131089|100131089|uncharacterized LOC100131089##AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AK074361|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor##BC104983|BMF|90427|Bcl2 modifying factor##BC104985|BMF|90427|Bcl2 modifying factor##BC069328|BMF|90427|Bcl2 modifying factor##BC069505|BMF|90427|Bcl2 modifying factor##NM_033503|BMF|90427|Bcl2 modifying factor##AK024472|BMF|90427|Bcl2 modifying factor##BC060783|BMF|90427|Bcl2 modifying factor##BC070043|BMF|90427|Bcl2 modifying factor##NM_001003940|BMF|90427|Bcl2 modifying factor	0.0	
chr17	67354968	67355084	reg1026069.p1	5.508	+	TSC_hg19_v1_chr17_-_67323275 BC029426 AJ512612 AJ275973 AK292592 NM_172232	-31737	-	AK096664 NM_018672	-43253	-	AY028900 NM_080282 AY247065	-114056	-	AK290747 NM_002758 U39065 AK225719 X96757 BC012009	55850	+	TSC_hg19_v1_chr17_+_67498396 U39064	143454	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	716404	+	BC029426|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ512612|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ275973|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AK292592|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_172232|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AK096664|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_018672|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##AK290747|MAP2K6|5608|mitogen-activated protein kinase kinase 6##NM_002758|MAP2K6|5608|mitogen-activated protein kinase kinase 6##U39065|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AK225719|MAP2K6|5608|mitogen-activated protein kinase kinase 6##X96757|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC012009|MAP2K6|5608|mitogen-activated protein kinase kinase 6##U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16	0.336094	CTCF.p2:-2:0.336
chr4	2950758	2950880	reg1027427.p1	5.508	+	TSC_hg19_v1_chr4_+_2936642 AK054619 BC020978 BC032331 BC041605	-14165	+	TSC_hg19_v1_chr4_-_2936577 NM_001146069	-14244	-	TSC_hg19_v1_chr4_-_2936515 BC001502 BC014979	-14332	-	TSC_hg19_v1_chr4_-_2965083 CU693114 BC026035	14244	-	TSC_hg19_v1_chr4_-_2965091 AF040965	14279	-	BC053635 TSC_hg19_v1_chr4_-_2965134 BC017358 NM_003703	14304	-	BC020978|C4orf10|317648|chromosome 4 open reading frame 10##BC041605|C4orf10|317648|chromosome 4 open reading frame 10##NM_001146069|MFSD10|10227|major facilitator superfamily domain containing 10##BC001502|MFSD10|10227|major facilitator superfamily domain containing 10##BC014979|MFSD10|10227|major facilitator superfamily domain containing 10##BC026035|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##AF040965|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC053635|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC017358|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##NM_003703|NOP14|8602|NOP14 nucleolar protein homolog (yeast)	0.998696	CTCF.p2:12:0.999
chr11	113601740	113601857	reg1025166.p1	5.507	+	AK295366 BC047222 AK294313 BC028065 BC121802 BC121803 NM_030770 TSC_hg19_v1_chr11_-_113577091 AB028140	-24740	-	S69899 BC021195 NM_000795 NM_016574 M30625	-255823	-	AJ541797 NM_178510 AF487542	-343239	+	TSC_hg19_v1_chr11_-_113644415 U54996 BC128264	42613	-	TSC_hg19_v1_chr11_-_113644447 AK300746 AK312925	42652	-	TSC_hg19_v1_chr11_-_113644486 NM_004724	42686	-	AK295366|TMPRSS5|80975|transmembrane protease, serine 5##BC047222|TMPRSS5|80975|transmembrane protease, serine 5##AK294313|TMPRSS5|80975|transmembrane protease, serine 5##BC028065|TMPRSS5|80975|transmembrane protease, serine 5##BC121802|TMPRSS5|80975|transmembrane protease, serine 5##BC121803|TMPRSS5|80975|transmembrane protease, serine 5##NM_030770|TMPRSS5|80975|transmembrane protease, serine 5##AB028140|TMPRSS5|80975|transmembrane protease, serine 5##S69899|DRD2|1813|dopamine receptor D2##BC021195|DRD2|1813|dopamine receptor D2##NM_000795|DRD2|1813|dopamine receptor D2##NM_016574|DRD2|1813|dopamine receptor D2##M30625|DRD2|1813|dopamine receptor D2##AJ541797|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_178510|ANKK1|255239|ankyrin repeat and kinase domain containing 1##AF487542|ANKK1|255239|ankyrin repeat and kinase domain containing 1##U54996|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##BC128264|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AK300746|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AK312925|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##NM_004724|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)	0.965809	CTCF.p2:29:0.966
chr1	154934438	154934619	reg1023539.p3	5.507	+	TSC_hg19_v1_chr1_-_154934259 NM_138300	-270	-	AF289598 AF457208 AB528446 DQ893379 DQ895952 TSC_hg19_v1_chr1_-_154934210 AK092389 AX747515 BC006132 BC032099	-397	-	TSC_hg19_v1_chr1_-_154928604 AK022497 AK300544 AK310712 AK315551	-5917	-	AB451255 AB451379 AB527815 AK225332 TSC_hg19_v1_chr1_-_154943224 BX647136 U73377 BC011813 BC017283 AK296786 AK096169 BC033925 BX647149 NM_001130040 NM_183001	8596	-	X68148 TSC_hg19_v1_chr1_-_154946815	12284	-	TSC_hg19_v1_chr1_-_154946849 BC014158 AK130014	12312	-	NM_138300|PYGO2|90780|pygopus homolog 2 (Drosophila)##AF289598|PYGO2|90780|pygopus homolog 2 (Drosophila)##AF457208|PYGO2|90780|pygopus homolog 2 (Drosophila)##DQ893379|PYGO2|90780|pygopus homolog 2 (Drosophila)##DQ895952|PYGO2|90780|pygopus homolog 2 (Drosophila)##AK092389|PYGO2|90780|pygopus homolog 2 (Drosophila)##BC006132|PYGO2|90780|pygopus homolog 2 (Drosophila)##BC032099|PYGO2|90780|pygopus homolog 2 (Drosophila)##AK022497|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK300544|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK310712|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK315551|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AB451255|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AB451379|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AK225332|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BX647136|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##U73377|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BC011813|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BC017283|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AK296786|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AK096169|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BC033925|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BX647149|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##NM_001130040|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##NM_183001|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##X68148|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BC014158|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AK130014|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	0.0	
chr12	56583431	56583528	reg1022941.p1	5.507	+	TSC_hg19_v1_chr12_-_56583357 AB209006 NM_001130420 NM_003075 NM_139067	-132	-	AB384911 BT009924 EU176256 AK315153 TSC_hg19_v1_chr12_-_56583268 BC026222 AK293896 AB209293 U66616 BC013045	-207	-	TSC_hg19_v1_chr12_-_56563972 BC009067	-19502	-	NM_001242826 BC011626 BC095418 TSC_hg19_v1_chr12_-_56615651 BC036267	32093	-	TSC_hg19_v1_chr12_-_56615718 BC024284 AK300752 NM_005785 NM_194358 AK314811 AK304576 NM_194359	32246	-	TSC_hg19_v1_chr12_+_56618125 NM_024068	34644	+	AB209006|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_001130420|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_003075|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_139067|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##BT009924|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##EU176256|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##AK315153|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##BC026222|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##AK293896|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##AB209293|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##U66616|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##BC013045|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##BC009067|SMARCC2|6601|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2##NM_001242826|RNF41|10193|ring finger protein 41##BC011626|RNF41|10193|ring finger protein 41##BC095418|RNF41|10193|ring finger protein 41##BC036267|RNF41|10193|ring finger protein 41##BC024284|RNF41|10193|ring finger protein 41##AK300752|RNF41|10193|ring finger protein 41##NM_005785|RNF41|10193|ring finger protein 41##NM_194358|RNF41|10193|ring finger protein 41##AK314811|RNF41|10193|ring finger protein 41##AK304576|RNF41|10193|ring finger protein 41##NM_194359|RNF41|10193|ring finger protein 41##NM_024068|OBFC2B|79035|oligonucleotide/oligosaccharide-binding fold containing 2B	1.849888	CTCF.p2:21:0.871	CTCF.p2:-83:0.979
chr17	8099404	8099541	reg1023712.p1	5.507	+	TSC_hg19_v1_chr17_-_8093499 NM_017622	-5945	-	BC009261 AK000021 AK222506 TSC_hg19_v1_chr17_-_8093462 BC018880 BC070272	-6068	-	CU687070 BC006292 TSC_hg19_v1_chr17_-_8079699 AK127891 AK315666 AK027813 BC119730 BC119731 BC127649 BC127650 AY358525 BC070231 NM_032354 NM_183065	-19812	-	BC009751 AB011446 BC080581 AB011450 AF004022 AF015254 BC000442 NM_004217 TSC_hg19_v1_chr17_-_8113894 AK314889 AK297976 BC013300	14411	-	DQ451688 FJ790670 AL831955 TSC_hg19_v1_chr17_-_8151371 AK091077 AX746768 BC111783	51890	-	TSC_hg19_v1_chr17_-_8151373 NM_025099	51920	-	NM_017622|C17orf59|54785|chromosome 17 open reading frame 59##BC009261|C17orf59|54785|chromosome 17 open reading frame 59##AK000021|C17orf59|54785|chromosome 17 open reading frame 59##AK222506|C17orf59|54785|chromosome 17 open reading frame 59##BC018880|C17orf59|54785|chromosome 17 open reading frame 59##BC070272|C17orf59|54785|chromosome 17 open reading frame 59##BC006292|TMEM107|84314|transmembrane protein 107##AK315666|TMEM107|84314|transmembrane protein 107##AK027813|TMEM107|84314|transmembrane protein 107##BC119730|TMEM107|84314|transmembrane protein 107##BC119731|TMEM107|84314|transmembrane protein 107##BC127649|TMEM107|84314|transmembrane protein 107##BC127650|TMEM107|84314|transmembrane protein 107##AY358525|TMEM107|84314|transmembrane protein 107##BC070231|TMEM107|84314|transmembrane protein 107##NM_032354|TMEM107|84314|transmembrane protein 107##NM_183065|TMEM107|84314|transmembrane protein 107##BC009751|AURKB|9212|aurora kinase B##AB011446|AURKB|9212|aurora kinase B##BC080581|AURKB|9212|aurora kinase B##AB011450|AURKB|9212|aurora kinase B##AF004022|AURKB|9212|aurora kinase B##AF015254|AURKB|9212|aurora kinase B##BC000442|AURKB|9212|aurora kinase B##NM_004217|AURKB|9212|aurora kinase B##AK314889|AURKB|9212|aurora kinase B##AK297976|AURKB|9212|aurora kinase B##BC013300|AURKB|9212|aurora kinase B##DQ451688|CTC1|80169|CTS telomere maintenance complex component 1##FJ790670|CTC1|80169|CTS telomere maintenance complex component 1##AL831955|CTC1|80169|CTS telomere maintenance complex component 1##AK091077|CTC1|80169|CTS telomere maintenance complex component 1##BC111783|CTC1|80169|CTS telomere maintenance complex component 1##NM_025099|CTC1|80169|CTS telomere maintenance complex component 1	0.0	
chr20	46127140	46127230	reg1025626.p1	5.507	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-141697	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-150538	-	TSC_hg19_v1_chr20_-_45927496 BC030721	-199616	-	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	3437	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	3499	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	287567	-	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2	0.0	
chr20	569962	570078	reg1025521.p1	5.507	+	TSC_hg19_v1_chr20_-_524377 DQ354583 BC011668 M55265 BC002615 J02853 S53149 BC050036 AK302583 AK312535 AY735339 NM_001895 NM_177559 NM_177560	-45612	-	TSC_hg19_v1_chr20_-_443178 AK095110 NM_144628 AK127062	-126805	-	TSC_hg19_v1_chr20_-_443161 BC014983 AK291648	-126870	-	NM_004609 U08336 TSC_hg19_v1_chr20_-_590953 BC067836	20918	-	BC017001 TSC_hg19_v1_chr20_-_633843 AM393140 AM393844 BC047707 BC032604 AK312054	63805	-	TSC_hg19_v1_chr20_-_633845 AK127435 AL833944 NM_080725	63846	-	DQ354583|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##BC011668|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##M55265|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##BC002615|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##J02853|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##S53149|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##BC050036|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AK302583|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AK312535|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AY735339|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_001895|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_177559|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##NM_177560|CSNK2A1|1457|casein kinase 2, alpha 1 polypeptide##AK095110|TBC1D20|128637|TBC1 domain family, member 20##NM_144628|TBC1D20|128637|TBC1 domain family, member 20##AK127062|TBC1D20|128637|TBC1 domain family, member 20##BC014983|TBC1D20|128637|TBC1 domain family, member 20##AK291648|TBC1D20|128637|TBC1 domain family, member 20##NM_004609|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##U08336|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##BC067836|TCF15|6939|transcription factor 15 (basic helix-loop-helix)##BC017001|SRXN1|140809|sulfiredoxin 1##AM393140|SRXN1|140809|sulfiredoxin 1##AM393844|SRXN1|140809|sulfiredoxin 1##BC047707|SRXN1|140809|sulfiredoxin 1##BC032604|SRXN1|140809|sulfiredoxin 1##AK312054|SRXN1|140809|sulfiredoxin 1##AK127435|SRXN1|140809|sulfiredoxin 1##AL833944|SRXN1|140809|sulfiredoxin 1##NM_080725|SRXN1|140809|sulfiredoxin 1	0.034937	
chr2	217087421	217087544	reg1025100.p1	5.507	+	TSC_hg19_v1_chr2_+_216986829 AK026166	-100615	+	TSC_hg19_v1_chr2_+_216974124 J04977 M30938 AK290740 BC095442 BC019027 AB489155 CU676354 DQ892660 DQ895925	-113343	+	TSC_hg19_v1_chr2_+_216974112 AK222603	-113373	+	TSC_hg19_v1_chr2_-_217236666 AB037820 NM_020814	149225	-	NM_014140 TSC_hg19_v1_chr2_+_217277188 AK023780	189716	+	TSC_hg19_v1_chr2_+_217277487 NM_001127207 AF432223 BC043341	189996	+	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##J04977|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##M30938|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK290740|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC095442|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC019027|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ892660|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ895925|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK222603|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AB037820|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_020814|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_014140|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AK023780|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##NM_001127207|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AF432223|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##BC043341|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	0.04825	
chr5	88609697	88609859	reg1024313.p1	5.507	+	AL833268 AL833274 NM_001131005 NM_001193347	-409884	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-424514	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-424658	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	1095761	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1160404	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1160800	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr10	21144462	21144586	reg1025115.p1	5.506	+	TSC_hg19_v1_chr10_+_20105360 AK304591 AY358486 NM_032812	-1039151	+	TSC_hg19_v1_chr10_+_18948359 NM_178815 BC024163 AK027275 AF494061 DQ893166 DQ896464	-2196103	+	BC033534 TSC_hg19_v1_chr10_-_18948215	-2196327	-	NM_006393 Y16241	42006	-	BC140744 BC144447 NM_001010896 NM_001177483	290963	-	AB209311 TSC_hg19_v1_chr10_-_21462987	318463	-	AK304591|PLXDC2|84898|plexin domain containing 2##AY358486|PLXDC2|84898|plexin domain containing 2##NM_032812|PLXDC2|84898|plexin domain containing 2##NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B##BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B##AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B##AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B##NM_006393|NEBL|10529|nebulette##Y16241|NEBL|10529|nebulette##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113##AB209311|NEBL|10529|nebulette	0.442718	CTCF.p2:24:0.443
chr14	71614188	71614297	reg1028445.p1	5.506	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-239791	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-240109	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-338433	-	AF090989 AF090990 NM_015556	381799	+	AK294895 NM_001204423	784574	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	784911	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.147795	
chr19	7402740	7402921	reg1023059.p2	5.506	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	-108870	-	TSC_hg19_v1_chr19_-_7099547 AK127494	-303279	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-333115	+	TSC_hg19_v1_chr19_+_7460030 NM_015318	57177	+	TSC_hg19_v1_chr19_+_7460061 AB011093	57247	+	AK127045 NM_001130955	101743	+	BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr3	39189391	39189572	reg1022961.p1	5.506	+	NM_001105513 NM_145755 AJ487015 BC062621 BC129948 AK022483 BC039691 AK302408 AK302465 CU687576	-40242	+	TSC_hg19_v1_chr3_-_39149122 BC075854 AK001574 AK057043 AJ409349 NM_031899 AK303847	-40355	-	CU687304 AB527597 TSC_hg19_v1_chr3_-_39149103 BC064624 AK300271 BC103826 BC103827 BC008928	-40410	-	TSC_hg19_v1_chr3_-_39195053 BC038949 AB053121 BC028213	5570	-	NM_033027 TSC_hg19_v1_chr3_-_39195146	5643	-	BC127119 BC139782 AY375160 NM_194293 TSC_hg19_v1_chr3_-_39234085 AJ626899 AJ626900 NM_001198621 AK096421 BX648565 CR749430	44604	-	NM_001105513|TTC21A|199223|tetratricopeptide repeat domain 21A##NM_145755|TTC21A|199223|tetratricopeptide repeat domain 21A##AJ487015|TTC21A|199223|tetratricopeptide repeat domain 21A##BC062621|TTC21A|199223|tetratricopeptide repeat domain 21A##BC129948|TTC21A|199223|tetratricopeptide repeat domain 21A##AK022483|TTC21A|199223|tetratricopeptide repeat domain 21A##BC039691|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302408|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302465|TTC21A|199223|tetratricopeptide repeat domain 21A##BC075854|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK001574|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK057043|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AJ409349|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##NM_031899|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK303847|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC064624|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK300271|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103826|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103827|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC008928|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC038949|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##AB053121|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC028213|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##NM_033027|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC127119|XIRP1|165904|xin actin-binding repeat containing 1##BC139782|XIRP1|165904|xin actin-binding repeat containing 1##AY375160|XIRP1|165904|xin actin-binding repeat containing 1##NM_194293|XIRP1|165904|xin actin-binding repeat containing 1##AJ626899|XIRP1|165904|xin actin-binding repeat containing 1##AJ626900|XIRP1|165904|xin actin-binding repeat containing 1##NM_001198621|XIRP1|165904|xin actin-binding repeat containing 1##AK096421|XIRP1|165904|xin actin-binding repeat containing 1##BX648565|XIRP1|165904|xin actin-binding repeat containing 1##CR749430|XIRP1|165904|xin actin-binding repeat containing 1	0.0	
chr3	4468625	4468805	reg1026996.p2	5.505	+	TSC_hg19_v1_chr3_+_4345048 AK222734 AK297865 AK302296 AB590082 AF054989 BC011635 BC008931 U80776 AY952295 CU679994	-123652	+	AK307537 NM_001243723 NM_006515 TSC_hg19_v1_chr3_+_4345015	-123707	+	TSC_hg19_v1_chr3_+_3841114 NM_020873	-627616	+	AY208752 AY323910 AK057983 TSC_hg19_v1_chr3_-_4508936 AK302018 AB448737 BC110862	40217	-	TSC_hg19_v1_chr3_-_4508945 AY358092 AK075459	40228	-	AK295240 TSC_hg19_v1_chr3_-_4508953 BC121122 BC121123	40237	-	AK222734|SETMAR|6419|SET domain and mariner transposase fusion gene##AK297865|SETMAR|6419|SET domain and mariner transposase fusion gene##AK302296|SETMAR|6419|SET domain and mariner transposase fusion gene##AF054989|SETMAR|6419|SET domain and mariner transposase fusion gene##BC011635|SETMAR|6419|SET domain and mariner transposase fusion gene##BC008931|SETMAR|6419|SET domain and mariner transposase fusion gene##U80776|SETMAR|6419|SET domain and mariner transposase fusion gene##AY952295|SETMAR|6419|SET domain and mariner transposase fusion gene##AK307537|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_001243723|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_006515|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_020873|LRRN1|57633|leucine rich repeat neuronal 1##AY208752|SUMF1|285362|sulfatase modifying factor 1##AY323910|SUMF1|285362|sulfatase modifying factor 1##AK057983|SUMF1|285362|sulfatase modifying factor 1##AK302018|SUMF1|285362|sulfatase modifying factor 1##AB448737|SUMF1|285362|sulfatase modifying factor 1##BC110862|SUMF1|285362|sulfatase modifying factor 1##AY358092|SUMF1|285362|sulfatase modifying factor 1##AK075459|SUMF1|285362|sulfatase modifying factor 1##AK295240|SUMF1|285362|sulfatase modifying factor 1##BC121122|SUMF1|285362|sulfatase modifying factor 1##BC121123|SUMF1|285362|sulfatase modifying factor 1	0.0	
chr5	60256595	60256700	reg1026594.p1	5.505	+	TSC_hg19_v1_chr5_+_60241003 AK026051 NM_174889 AF087990 AK291296 BC001753 BC070357 BC033965 AB183433	-15635	+	AB527753 BT020021 CR536563 TSC_hg19_v1_chr5_-_60240898 U28413 AK056931 AK304610 AK314511 BC009793 AK290726 AK294856 NM_000082	-15777	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	-116576	-	BC146876 BC146881 BC014242 BC047489 TSC_hg19_v1_chr5_-_60458209	201531	-	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	201620	-	TSC_hg19_v1_chr5_+_60628085 NM_020928	371451	+	AK026051|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_174889|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AF087990|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AK291296|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC001753|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC070357|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC033965|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AB183433|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BT020021|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##CR536563|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##U28413|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK056931|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK304610|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK314511|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##BC009793|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK290726|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK294856|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##NM_000082|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7##BC146876|C5orf43|643155|chromosome 5 open reading frame 43##BC146881|C5orf43|643155|chromosome 5 open reading frame 43##BC014242|C5orf43|643155|chromosome 5 open reading frame 43##BC047489|C5orf43|643155|chromosome 5 open reading frame 43##BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6	0.966299	CTCF.p2:0:0.966
chr6	106537979	106538130	reg1025543.p1	5.505	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	-3819	+	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	-3858	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-687059	-	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	8750	+	BC002699 TSC_hg19_v1_chr6_-_106773313	235254	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	235478	-	AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	0.0	
chr7	120581238	120581395	reg1026730.p1	5.505	+	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	-83156	-	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	-83296	-	AK307139 AB028967 NM_012281	-667612	+	AK000096 NM_019071 NM_198267 TSC_hg19_v1_chr7_+_120590832 AF161419 BC009777 BC093091 AY007790 AK291905 AF074968 BC073865 AF180298 BC062634 BC093689 BC101609 BC143316 BC009776 BC010851 BC146417 BC153171 AB463778	9565	+	TSC_hg19_v1_chr7_+_120628742 NM_024913 AK289978 AL832619	47449	+	TSC_hg19_v1_chr7_+_120628867 AL832638	47580	+	BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AK000096|ING3|54556|inhibitor of growth family, member 3##NM_019071|ING3|54556|inhibitor of growth family, member 3##NM_198267|ING3|54556|inhibitor of growth family, member 3##AF161419|ING3|54556|inhibitor of growth family, member 3##BC009777|ING3|54556|inhibitor of growth family, member 3##BC093091|ING3|54556|inhibitor of growth family, member 3##AY007790|ING3|54556|inhibitor of growth family, member 3##AK291905|ING3|54556|inhibitor of growth family, member 3##AF074968|ING3|54556|inhibitor of growth family, member 3##BC073865|ING3|54556|inhibitor of growth family, member 3##AF180298|ING3|54556|inhibitor of growth family, member 3##BC062634|ING3|54556|inhibitor of growth family, member 3##BC093689|ING3|54556|inhibitor of growth family, member 3##BC101609|ING3|54556|inhibitor of growth family, member 3##BC143316|ING3|54556|inhibitor of growth family, member 3##BC009776|ING3|54556|inhibitor of growth family, member 3##BC010851|ING3|54556|inhibitor of growth family, member 3##BC146417|ING3|54556|inhibitor of growth family, member 3##BC153171|ING3|54556|inhibitor of growth family, member 3##NM_024913|C7orf58|79974|chromosome 7 open reading frame 58##AK289978|C7orf58|79974|chromosome 7 open reading frame 58##AL832619|C7orf58|79974|chromosome 7 open reading frame 58##AL832638|C7orf58|79974|chromosome 7 open reading frame 58	0.989404	CTCF.p2:3:0.989
chr19	15136194	15136298	reg1027258.p1	5.504	+	AK097684 NM_173482 BC035678	-14700	+	TSC_hg19_v1_chr19_-_15090354 BC028721 BC040604	-45820	-	NM_005071 U18244	-52517	-	EU502748 AK313992 NM_012114	23996	+	BC140930 AB529304 NM_001004713	61587	+	TSC_hg19_v1_chr19_+_15218213 AK123686 NM_033025 AK315453 BC029926 CU688794	81945	+	AK097684|CCDC105|126402|coiled-coil domain containing 105##NM_173482|CCDC105|126402|coiled-coil domain containing 105##BC035678|CCDC105|126402|coiled-coil domain containing 105##BC028721|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##BC040604|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##NM_005071|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##U18244|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##EU502748|CASP14|23581|caspase 14, apoptosis-related cysteine peptidase##AK313992|CASP14|23581|caspase 14, apoptosis-related cysteine peptidase##NM_012114|CASP14|23581|caspase 14, apoptosis-related cysteine peptidase##BC140930|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1##NM_001004713|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1##AK123686|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)##NM_033025|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)##AK315453|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)##BC029926|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)	0.0	
chr1	93546084	93546215	reg1026647.p1	5.504	+	TSC_hg19_v1_chr1_+_93544836 NM_001164391 NM_001164392 NM_001164393 NM_007358 AK290318 AK302900 AJ010014 AK302776 AF086908 BC010013 BC001897	-1316	+	TSC_hg19_v1_chr1_-_93427020 BC070342 NM_001006605 NM_001252269 NM_001252270 NM_001252273	-119111	-	TSC_hg19_v1_chr1_-_93399531 BX648424	-146557	-	AY359039 BC016556 AF151858 TSC_hg19_v1_chr1_-_93645971 AK293308 BC016365 AK312787 CR936808 AK125882	99838	-	BC070051 NM_001167830 NM_016040	100096	-	TSC_hg19_v1_chr1_+_93646280 BC056667 NM_206886	100132	+	NM_001164391|MTF2|22823|metal response element binding transcription factor 2##NM_001164392|MTF2|22823|metal response element binding transcription factor 2##NM_001164393|MTF2|22823|metal response element binding transcription factor 2##NM_007358|MTF2|22823|metal response element binding transcription factor 2##AK290318|MTF2|22823|metal response element binding transcription factor 2##AK302900|MTF2|22823|metal response element binding transcription factor 2##AJ010014|MTF2|22823|metal response element binding transcription factor 2##AK302776|MTF2|22823|metal response element binding transcription factor 2##AF086908|MTF2|22823|metal response element binding transcription factor 2##BC010013|MTF2|22823|metal response element binding transcription factor 2##BC001897|MTF2|22823|metal response element binding transcription factor 2##BC070342|FAM69A|388650|family with sequence similarity 69, member A##NM_001006605|FAM69A|388650|family with sequence similarity 69, member A##NM_001252269|FAM69A|388650|family with sequence similarity 69, member A##NM_001252270|FAM69A|388650|family with sequence similarity 69, member A##NM_001252273|FAM69A|388650|family with sequence similarity 69, member A##AY359039|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016556|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AF151858|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK293308|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC016365|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK312787|TMED5|50999|transmembrane emp24 protein transport domain containing 5##CR936808|TMED5|50999|transmembrane emp24 protein transport domain containing 5##AK125882|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC070051|TMED5|50999|transmembrane emp24 protein transport domain containing 5##NM_001167830|TMED5|50999|transmembrane emp24 protein transport domain containing 5##NM_016040|TMED5|50999|transmembrane emp24 protein transport domain containing 5##BC056667|CCDC18|343099|coiled-coil domain containing 18##NM_206886|CCDC18|343099|coiled-coil domain containing 18	0.0	
chr3	197409665	197409831	reg1026424.p2	5.504	+	TSC_hg19_v1_chr3_-_197354756 BC067856 AK309924 BC094848 AK299863 BC080518 AK311713	-54995	-	NM_203315 TSC_hg19_v1_chr3_-_197300209	-109547	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	-126906	-	TSC_hg19_v1_chr3_-_197463770 BC033615 NM_014687	54038	-	AK303462 NM_001011537	66675	+	NM_001145642	66819	-	BC067856|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK309924|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC094848|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK299863|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC080518|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK311713|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##NM_203315|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC033615|KIAA0226|9711|KIAA0226##NM_014687|KIAA0226|9711|KIAA0226##AK303462|FYTTD1|84248|forty-two-three domain containing 1##NM_001011537|FYTTD1|84248|forty-two-three domain containing 1##NM_001145642|KIAA0226|9711|KIAA0226	0.012195	
chr3	32461759	32461876	reg1021945.p1	5.504	+	TSC_hg19_v1_chr3_+_32433370 BC010116 AY174113 DQ132881 AK308878	-28414	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	-28648	+	TSC_hg19_v1_chr3_+_32280215 BC041390	-181598	+	CR457231 TSC_hg19_v1_chr3_-_32544290	82455	-	TSC_hg19_v1_chr3_-_32544335 AK000403	82516	-	BC002797 TSC_hg19_v1_chr3_-_32544365 NM_017801	82563	-	BC010116|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AY174113|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##DQ132881|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AK308878|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##CR457231|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##AK000403|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##BC002797|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##NM_017801|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6	0.0	
chrX	26670022	26670131	reg1026101.p1	5.504	+	AK097561 BC067286 NM_173523	-459520	+	NM_173699 BC029525 AK057361	-513590	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-1636003	-	BC157859 NM_001136533	1094849	+	AK057527 NM_182506 BC101307 BC101309 BC101310	1156039	+	AK128123 NM_001017930	1329489	-	AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##NM_139058|ARX|170302|aristaless related homeobox##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	0.897079	CTCF.p2:24:0.897
chr17	37790798	37790905	reg1023702.p2	5.503	+	AY070271 NM_001242464 NM_181505 AF435973 AF435974 AK024593 AK225058 BC001519	-6090	+	TSC_hg19_v1_chr17_+_37783204 AK123112 AK127542 AK129537 AF435972	-7642	+	NM_032192 AF464196 TSC_hg19_v1_chr17_+_37783188	-7667	+	NM_001165937 NM_001165938 NM_006804 TSC_hg19_v1_chr17_+_37793404 BC008356 AK301524 AK303114 AK300176 AK225069 BC025679 BC008747 D38255 BC019286 X80198 AK300842	2536	+	NM_003673 BC012628 BC013330 AJ000491 DQ892812 DQ896058	30753	+	BC037246 NM_002686	33655	+	AY070271|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##NM_001242464|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##NM_181505|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435973|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435974|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK024593|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK225058|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##BC001519|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK123112|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK127542|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AK129537|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF435972|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##NM_032192|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##AF464196|PPP1R1B|84152|protein phosphatase 1, regulatory (inhibitor) subunit 1B##NM_001165937|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##NM_001165938|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##NM_006804|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC008356|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK301524|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK303114|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK300176|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK225069|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC025679|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC008747|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##D38255|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC019286|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##X80198|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK300842|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##NM_003673|TCAP|8557|titin-cap (telethonin)##BC012628|TCAP|8557|titin-cap (telethonin)##BC013330|TCAP|8557|titin-cap (telethonin)##AJ000491|TCAP|8557|titin-cap (telethonin)##DQ892812|TCAP|8557|titin-cap (telethonin)##DQ896058|TCAP|8557|titin-cap (telethonin)##BC037246|PNMT|5409|phenylethanolamine N-methyltransferase##NM_002686|PNMT|5409|phenylethanolamine N-methyltransferase	0.982356	CTCF.p2:-6:0.982
chr5	33934726	33934906	reg1005177.p3	5.503	+	TSC_hg19_v1_chr5_-_33892294 AJ250725	-42521	-	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	-42771	-	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	-493677	+	D88437 NM_016568	1674	+	CU687878 CU678524 AF172849 BC064405 BC003597 NM_001012509 NM_016180	49917	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	73347	-	AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##D88437|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##NM_016568|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##AF172849|SLC45A2|51151|solute carrier family 45, member 2##BC064405|SLC45A2|51151|solute carrier family 45, member 2##BC003597|SLC45A2|51151|solute carrier family 45, member 2##NM_001012509|SLC45A2|51151|solute carrier family 45, member 2##NM_016180|SLC45A2|51151|solute carrier family 45, member 2##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase	0.0	
chr6_mcf_hap5	3076938	3077051	reg1025993.p1	5.503	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.016416	
chrX	92677835	92677937	reg1024486.p1	5.503	+	AJ564931 NM_001168360 NM_001168361 NM_001168362 NM_001168363 AF206516 AF217288 AY861432 AY861433 AY861434 AY861435	-1587405	+	AB026187 AF332218 AF332219 AJ564932 NM_014522 NM_032968 NM_032969	-1588228	+	NM_032967 AJ276804 AJ564847 AK299638 AK299813 AK316263 TSC_hg19_v1_chrX_+_91034373	-1643569	+	AK090772 D50370 TSC_hg19_v1_chrX_-_92928576 BC034954 AK315176 AK223621 BC094729 AK095682 NM_004538	250737	-	NM_001171109 NM_001171110 NM_001171111 NM_173698	251125	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	3261865	+	AJ564931|PCDH11X|27328|protocadherin 11 X-linked##NM_001168360|PCDH11X|27328|protocadherin 11 X-linked##NM_001168361|PCDH11X|27328|protocadherin 11 X-linked##NM_001168362|PCDH11X|27328|protocadherin 11 X-linked##NM_001168363|PCDH11X|27328|protocadherin 11 X-linked##AF206516|PCDH11X|27328|protocadherin 11 X-linked##AF217288|PCDH11X|27328|protocadherin 11 X-linked##AY861432|PCDH11X|27328|protocadherin 11 X-linked##AY861433|PCDH11X|27328|protocadherin 11 X-linked##AY861434|PCDH11X|27328|protocadherin 11 X-linked##AY861435|PCDH11X|27328|protocadherin 11 X-linked##AB026187|PCDH11X|27328|protocadherin 11 X-linked##AF332218|PCDH11X|27328|protocadherin 11 X-linked##AF332219|PCDH11X|27328|protocadherin 11 X-linked##AJ564932|PCDH11X|27328|protocadherin 11 X-linked##NM_014522|PCDH11X|27328|protocadherin 11 X-linked##NM_032968|PCDH11X|27328|protocadherin 11 X-linked##NM_032969|PCDH11X|27328|protocadherin 11 X-linked##NM_032967|PCDH11X|27328|protocadherin 11 X-linked##AJ276804|PCDH11X|27328|protocadherin 11 X-linked##AJ564847|PCDH11X|27328|protocadherin 11 X-linked##AK299813|PCDH11X|27328|protocadherin 11 X-linked##AK316263|PCDH11X|27328|protocadherin 11 X-linked##AK090772|NAP1L3|4675|nucleosome assembly protein 1-like 3##D50370|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC034954|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK315176|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK223621|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC094729|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK095682|NAP1L3|4675|nucleosome assembly protein 1-like 3##NM_004538|NAP1L3|4675|nucleosome assembly protein 1-like 3##NM_001171109|FAM133A|286499|family with sequence similarity 133, member A##NM_001171110|FAM133A|286499|family with sequence similarity 133, member A##NM_001171111|FAM133A|286499|family with sequence similarity 133, member A##NM_173698|FAM133A|286499|family with sequence similarity 133, member A##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)	0.99424	CTCF.p2:4:0.994
chr16	13861134	13861253	reg1026984.p2	5.502	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-865725	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-963474	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-963542	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	152838	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	303893	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	419325	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.0	
chr3	137833855	137834035	reg1027537.p2	5.502	+	AK057406 NM_001170538	-1624	-	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	-104942	+	AK098474 NM_001002026 AF349452	-116266	+	BC033308 NM_173543 TSC_hg19_v1_chr3_-_137834481	530	-	BC119639 BC119640 AF141315 AK225668 NM_016161	17230	-	DQ895420 EU176332 TSC_hg19_v1_chr3_-_137893704	59727	-	AK057406|DZIP1L|199221|DAZ interacting protein 1-like##NM_001170538|DZIP1L|199221|DAZ interacting protein 1-like##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##BC033308|DZIP1L|199221|DAZ interacting protein 1-like##NM_173543|DZIP1L|199221|DAZ interacting protein 1-like##BC119639|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##BC119640|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##AF141315|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##AK225668|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##NM_016161|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##DQ895420|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##EU176332|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)	0.218994	CTCF.p2:34:0.219
chr3	189807630	189807811	reg1025429.p2	5.502	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	-300202	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-458461	+	AK125682 NM_198485 BC101550 BC101552	-917909	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	30975	-	NM_018192	31187	-	NM_001134418	32505	-	AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##NM_001134418|LEPREL1|55214|leprecan-like 1	0.0	
chr16	57048604	57048758	reg1023442.p1	5.501	+	TSC_hg19_v1_chr16_+_57023474 AK097030	-25221	+	M30185 AK297699 NM_000078 TSC_hg19_v1_chr16_+_56995861 AK291586 BC025739 EU176529 CU693046 BT020064 M83573	-52844	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	-82540	+	AK074182 NM_032206	2304	+	AF389420 EF452236 TSC_hg19_v1_chr16_+_57054697	5979	+	TSC_hg19_v1_chr16_+_57126462 NM_152727	77784	+	AK097030|NLRC5|84166|NLR family, CARD domain containing 5##M30185|CETP|1071|cholesteryl ester transfer protein, plasma##AK297699|CETP|1071|cholesteryl ester transfer protein, plasma##NM_000078|CETP|1071|cholesteryl ester transfer protein, plasma##AK291586|CETP|1071|cholesteryl ester transfer protein, plasma##BC025739|CETP|1071|cholesteryl ester transfer protein, plasma##EU176529|CETP|1071|cholesteryl ester transfer protein, plasma##BT020064|CETP|1071|cholesteryl ester transfer protein, plasma##M83573|CETP|1071|cholesteryl ester transfer protein, plasma##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK074182|NLRC5|84166|NLR family, CARD domain containing 5##NM_032206|NLRC5|84166|NLR family, CARD domain containing 5##AF389420|NLRC5|84166|NLR family, CARD domain containing 5##EF452236|NLRC5|84166|NLR family, CARD domain containing 5##NM_152727|CPNE2|221184|copine II	0.0	
chr6_dbb_hap3	4410658	4410768	reg1026899.p2	5.501	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.964158	CTCF.p2:-6:0.964
chr4	8963226	8963342	reg1025094.p1	5.500	+	NM_001040071	-11808	+	AB593128 M99587 NM_018942	-89787	-	U83411 TSC_hg19_v1_chr4_+_8594521	-368761	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	253845	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	282319	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	296564	+	NM_001040071|LOC650293|650293|seven transmembrane helix receptor##M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.996917	CTCF.p2:-1:0.997
chr7	18396026	18396174	reg1007531.p2	5.500	+	AK097178 TSC_hg19_v1_chr7_+_18330071	-66041	+	TSC_hg19_v1_chr7_+_18126583 AK304298 NM_001204144	-269509	+	BC062797 BC005309 M57423 NM_175886	-328635	-	TSC_hg19_v1_chr7_+_18535361 BC092441 BC150328 AB018287 AJ459808 BC152405 NM_001204145 NM_001204146 NM_014707 NM_178423 AK297404 AK316109 AY429540	139299	+	CR749550 EU832154 EU832248 TSC_hg19_v1_chr7_+_18535882 NM_058176 NM_178425 AB385379 AY032737 AY032738 AY197371 EU832247 BC111735	139771	+	NM_001204147 NM_001204148 TSC_hg19_v1_chr7_+_18548932 AK304410	152823	+	AK097178|HDAC9|9734|histone deacetylase 9##AK304298|HDAC9|9734|histone deacetylase 9##NM_001204144|HDAC9|9734|histone deacetylase 9##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC150328|HDAC9|9734|histone deacetylase 9##AB018287|HDAC9|9734|histone deacetylase 9##AJ459808|HDAC9|9734|histone deacetylase 9##BC152405|HDAC9|9734|histone deacetylase 9##NM_001204145|HDAC9|9734|histone deacetylase 9##NM_001204146|HDAC9|9734|histone deacetylase 9##NM_014707|HDAC9|9734|histone deacetylase 9##NM_178423|HDAC9|9734|histone deacetylase 9##AK297404|HDAC9|9734|histone deacetylase 9##AK316109|HDAC9|9734|histone deacetylase 9##AY429540|HDAC9|9734|histone deacetylase 9##CR749550|HDAC9|9734|histone deacetylase 9##EU832154|HDAC9|9734|histone deacetylase 9##EU832248|HDAC9|9734|histone deacetylase 9##NM_058176|HDAC9|9734|histone deacetylase 9##NM_178425|HDAC9|9734|histone deacetylase 9##AY032737|HDAC9|9734|histone deacetylase 9##AY032738|HDAC9|9734|histone deacetylase 9##AY197371|HDAC9|9734|histone deacetylase 9##EU832247|HDAC9|9734|histone deacetylase 9##BC111735|HDAC9|9734|histone deacetylase 9##NM_001204147|HDAC9|9734|histone deacetylase 9##NM_001204148|HDAC9|9734|histone deacetylase 9##AK304410|HDAC9|9734|histone deacetylase 9	0.0	
chr8	145060276	145060416	reg1019063.p1	5.500	+	TSC_hg19_v1_chr8_-_145050917 U53204 NM_000445	-9419	-	AY480045 NM_201378 TSC_hg19_v1_chr8_-_145047698	-12677	-	TSC_hg19_v1_chr8_-_145028003 AY480046 NM_201379	-32315	-	AK303317 TSC_hg19_v1_chr8_-_145060590 AK128537 BC132961 BC136542 BC144235	231	-	AK027370 TSC_hg19_v1_chr8_-_145060609 AK309251 BC030549 BC020378 AK222914 AK308657 NM_032789	268	-	BC035485 TSC_hg19_v1_chr8_-_145064214	3829	-	U53204|PLEC|5339|plectin##NM_000445|PLEC|5339|plectin##AY480045|PLEC|5339|plectin##NM_201378|PLEC|5339|plectin##AY480046|PLEC|5339|plectin##NM_201379|PLEC|5339|plectin##AK303317|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK128537|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC132961|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC136542|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC144235|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK027370|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK309251|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC030549|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC020378|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK222914|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK308657|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##NM_032789|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC035485|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	0.548274	CTCF.p2:0:0.548
chrX	47611218	47611323	reg1026672.p1	5.500	+	TSC_hg19_v1_chrX_-_47518553 AF083241 AK312072 AF092737 NM_004182 NM_153477	-92706	-	TSC_hg19_v1_chrX_-_47518534 AF083242 AK223320	-92759	-	TSC_hg19_v1_chrX_-_47510001 NM_001114123 NM_005229	-101262	-	TSC_hg19_v1_chrX_+_47696313 AK126949 NM_007137	85027	+	TSC_hg19_v1_chrX_+_47696322 BC039609	85073	+	TSC_hg19_v1_chrX_-_47863389 BC114216 AK299325 AK122874 NM_001007088 NM_006962 NM_001178099	252083	-	AF083241|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AK312072|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AF092737|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##NM_004182|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##NM_153477|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AF083242|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AK223320|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##NM_001114123|ELK1|2002|ELK1, member of ETS oncogene family##NM_005229|ELK1|2002|ELK1, member of ETS oncogene family##AK126949|ZNF81|347344|zinc finger protein 81##NM_007137|ZNF81|347344|zinc finger protein 81##BC039609|ZNF81|347344|zinc finger protein 81##BC114216|ZNF182|7569|zinc finger protein 182##AK299325|ZNF182|7569|zinc finger protein 182##AK122874|ZNF182|7569|zinc finger protein 182##NM_001007088|ZNF182|7569|zinc finger protein 182##NM_006962|ZNF182|7569|zinc finger protein 182##NM_001178099|ZNF182|7569|zinc finger protein 182	0.999633	CTCF.p2:18:1.000
chr4	6888114	6888225	reg1022252.p2	5.499	+	TSC_hg19_v1_chr4_+_6784518 AK124715 EF553521	-103641	+	TSC_hg19_v1_chr4_+_6784467 BC150286 D86985	-103695	+	TSC_hg19_v1_chr4_+_6784458 NM_001100590 NM_014743	-103714	+	TSC_hg19_v1_chr4_+_6911192 NM_001113361	22983	+	TSC_hg19_v1_chr4_-_6911379 BC032036	23236	-	TSC_hg19_v1_chr4_+_6911497 NM_020773	23307	+	AK124715|KIAA0232|9778|KIAA0232##EF553521|KIAA0232|9778|KIAA0232##BC150286|KIAA0232|9778|KIAA0232##D86985|KIAA0232|9778|KIAA0232##NM_001100590|KIAA0232|9778|KIAA0232##NM_014743|KIAA0232|9778|KIAA0232##NM_001113361|TBC1D14|57533|TBC1 domain family, member 14##NM_020773|TBC1D14|57533|TBC1 domain family, member 14	0.01838	
chr5	179334922	179335102	reg1024299.p2	5.499	+	TSC_hg19_v1_chr5_-_179334854 AB014576 BC129994 NM_015043 NM_198868	-160	-	AB449893 TSC_hg19_v1_chr5_-_179334837 AB463306	-182	-	TSC_hg19_v1_chr5_+_179286046 BC040901	-49017	+	AK313089 BC017100 TSC_hg19_v1_chr5_-_179498743 BC082267	163679	-	TSC_hg19_v1_chr5_-_179499095 BC113864 BC114472 AB209800 AY083998 NM_018434 BC108306	164053	-	TSC_hg19_v1_chr5_-_179636160 NM_175062 BC036802	301164	-	AB014576|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##BC129994|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_015043|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_198868|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##AB449893|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##AK313089|RNF130|55819|ring finger protein 130##BC017100|RNF130|55819|ring finger protein 130##BC082267|RNF130|55819|ring finger protein 130##BC113864|RNF130|55819|ring finger protein 130##BC114472|RNF130|55819|ring finger protein 130##AB209800|RNF130|55819|ring finger protein 130##AY083998|RNF130|55819|ring finger protein 130##NM_018434|RNF130|55819|ring finger protein 130##BC108306|RNF130|55819|ring finger protein 130##NM_175062|RASGEF1C|255426|RasGEF domain family, member 1C##BC036802|RASGEF1C|255426|RasGEF domain family, member 1C	0.989571	CTCF.p2:-54:0.990
chr17	61912335	61912452	reg1026030.p1	5.498	+	NM_001199163 TSC_hg19_v1_chr17_+_61905091 AK290758 AF035309	-7321	+	AK095861 NM_017647	-7363	-	NM_002805 TSC_hg19_v1_chr17_+_61904819 AK291878 BC001932 AK095836 AK098484 L38810 BC002367 D44467 AB464078 CU674938 DQ892196 DQ895391	-7584	+	TSC_hg19_v1_chr17_-_61920046 AK300939	7688	-	TSC_hg19_v1_chr17_-_61920289 BC142963	7894	-	TSC_hg19_v1_chr17_-_61920365 BC136322 NM_001098426 U66618	7957	-	NM_001199163|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##AK290758|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##AF035309|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##AK095861|FTSJ3|117246|FtsJ homolog 3 (E. coli)##NM_017647|FTSJ3|117246|FtsJ homolog 3 (E. coli)##NM_002805|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##AK291878|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##BC001932|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##AK095836|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##AK098484|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##L38810|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##BC002367|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##D44467|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##DQ892196|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##DQ895391|PSMC5|5705|proteasome (prosome, macropain) 26S subunit, ATPase, 5##AK300939|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##BC142963|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##BC136322|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##NM_001098426|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##U66618|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2	1.208437	CTCF.p2:-11:0.966	CTCF.p2:-54:0.243
chr22	24308406	24308521	reg1022380.p1	5.498	+	CR456929 L38503 CU013079 CU013097 CU013367 CU013385 DQ890742 AB528145 CR456500 BC071700 CR456374 BC146929 BC146936 NM_001080843 BC002415 AK312043 NM_000854 BC146940 BC146943	-5076	-	TSC_hg19_v1_chr22_+_24236595 BC007676 BC008914 M25639 BC053376 BC051440 CR456520 CU013120 CU013408 DQ892195 DQ895390 AB463103 AF469046 BT007148 CR407644 CR541651 Z23063 EF492869 M95775	-71822	+	L10612 TSC_hg19_v1_chr22_+_24236591	-71874	+	NM_001084393 AK296110 AK296189 AK298326	591	+	BT006970 CU012991 CU013279 DQ891571 DQ894765 U84143 AK298326 AK292044 CR456431 BC005971 AK296189 AK304122 AK315943 BC015508 NM_001084392	8177	-	NM_001355 U49785	13555	-	CR456929|GSTT2|2953|glutathione S-transferase theta 2##L38503|GSTT2|2953|glutathione S-transferase theta 2##CU013079|GSTT2|2953|glutathione S-transferase theta 2##CU013097|GSTT2|2953|glutathione S-transferase theta 2##CU013367|GSTT2|2953|glutathione S-transferase theta 2##CU013385|GSTT2|2953|glutathione S-transferase theta 2##DQ890742|GSTT2|2953|glutathione S-transferase theta 2##CR456500|GSTT2|2953|glutathione S-transferase theta 2##BC071700|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##CR456374|GSTT2|2953|glutathione S-transferase theta 2##BC146929|GSTT2|2953|glutathione S-transferase theta 2##BC146936|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##NM_001080843|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##BC002415|GSTT2|2953|glutathione S-transferase theta 2##AK312043|GSTT2|2953|glutathione S-transferase theta 2##NM_000854|GSTT2|2953|glutathione S-transferase theta 2##BC146940|GSTT2|2953|glutathione S-transferase theta 2##BC146943|GSTT2|2953|glutathione S-transferase theta 2##BC007676|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC008914|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##M25639|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC053376|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC051440|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CR456520|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CU013120|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CU013408|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##DQ892195|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##DQ895390|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##AF469046|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BT007148|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CR407644|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CR541651|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##Z23063|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##M95775|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##L10612|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##NM_001084393|DDTL|100037417|D-dopachrome tautomerase-like##AK296110|DDTL|100037417|D-dopachrome tautomerase-like##BT006970|DDT|1652|D-dopachrome tautomerase##CU012991|DDT|1652|D-dopachrome tautomerase##CU013279|DDT|1652|D-dopachrome tautomerase##DQ891571|DDT|1652|D-dopachrome tautomerase##DQ894765|DDT|1652|D-dopachrome tautomerase##U84143|DDT|1652|D-dopachrome tautomerase##AK292044|DDT|1652|D-dopachrome tautomerase##CR456431|DDT|1652|D-dopachrome tautomerase##BC005971|DDT|1652|D-dopachrome tautomerase##BC015508|DDT|1652|D-dopachrome tautomerase##NM_001084392|DDT|1652|D-dopachrome tautomerase##NM_001355|DDT|1652|D-dopachrome tautomerase##U49785|DDT|1652|D-dopachrome tautomerase	0.997785	CTCF.p2:-18:0.998
chr5	139050318	139050496	reg1022498.p2	5.498	+	TSC_hg19_v1_chr5_+_139028524 AK001782	-21899	+	TSC_hg19_v1_chr5_+_139028290 AB097005 AB097032 NM_016463	-22240	+	BC024040 BC041013 TSC_hg19_v1_chr5_+_139027968 BC050046 BC017439	-22423	+	BC002490 TSC_hg19_v1_chr5_+_139060088 AB463548 GQ379202 AK314420	9677	+	AF151029 TSC_hg19_v1_chr5_+_139060229	9805	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	9985	+	AK001782|CXXC5|51523|CXXC finger protein 5##AB097005|CXXC5|51523|CXXC finger protein 5##AB097032|CXXC5|51523|CXXC finger protein 5##NM_016463|CXXC5|51523|CXXC finger protein 5##BC024040|CXXC5|51523|CXXC finger protein 5##BC041013|CXXC5|51523|CXXC finger protein 5##BC050046|CXXC5|51523|CXXC finger protein 5##BC017439|CXXC5|51523|CXXC finger protein 5##BC002490|CXXC5|51523|CXXC finger protein 5##GQ379202|CXXC5|51523|CXXC finger protein 5##AK314420|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5	0.774197	CTCF.p2:3:0.774
chr5	73352717	73352847	reg1025392.p1	5.498	+	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	-243432	+	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	-430797	+	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	-491200	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	583681	-	AK096578 NM_003633	584466	-	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	628226	+	AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)	0.952391	CTCF.p2:-6:0.952
chr5	73927557	73927738	reg1028231.p1	5.498	+	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	-818297	+	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	-1005662	+	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	-1066065	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	8816	-	AK096578 NM_003633	9601	-	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	53361	+	AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)	0.0	
chr8	102513752	102513878	reg1025295.p1	5.498	+	TSC_hg19_v1_chr8_+_102504840 AK023844 AK292853 BC069618 BC069633 BC069638 BC129822 BC129823	-8905	+	TSC_hg19_v1_chr8_+_102504667 NM_024915 AK296817 AK310221	-9150	+	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	-295861	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	289368	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	289385	-	NM_032041	289623	-	AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##NM_032041|NCALD|83988|neurocalcin delta	0.720941	CTCF.p2:7:0.721
chrX	42981044	42981143	reg1026742.p1	5.498	+	AB208859 AB590064 HQ258518 AY705392 AF035582 BC117311 BC143454 BC143456 AF032119 NM_001126054 NM_001126055 NM_003688 AK313399	-1198768	-	BC070180 NM_080817 AK122626 AK313702 AL832460	-1397673	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	-1432826	+	BC044787 TSC_hg19_v1_chrX_+_43514289	533130	+	TSC_hg19_v1_chrX_+_43515423 NM_000240 AK223499	534321	+	TSC_hg19_v1_chrX_+_43515457 M68840	534387	+	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##BC044787|MAOA|4128|monoamine oxidase A##NM_000240|MAOA|4128|monoamine oxidase A##AK223499|MAOA|4128|monoamine oxidase A##M68840|MAOA|4128|monoamine oxidase A	0.164796	
chr1	85706153	85706334	reg1026608.p2	5.497	+	NM_032184 TSC_hg19_v1_chr1_-_85666752	-39503	-	NM_145172 AY049724 AK292603 AK054629 BC040265	-178234	+	TSC_hg19_v1_chr1_-_85514184 BX647497 AK314354 NM_001253693 NM_018298	-192045	-	AF387611 AF387612 AY486331 AY486332 BC029538 TSC_hg19_v1_chr1_-_85725338 AK126929 NM_198077	19096	-	AK098790 AF105066 AF127386 CU691004 AB527491 EF189176 BC053617 TSC_hg19_v1_chr1_-_85742229 BX647306 AK291346 AF100338 AF057700 AF134395	35892	-	NM_003921	36343	-	NM_032184|SYDE2|84144|synapse defective 1, Rho GTPase, homolog 2 (C. elegans)##NM_145172|WDR63|126820|WD repeat domain 63##AY049724|WDR63|126820|WD repeat domain 63##AK292603|WDR63|126820|WD repeat domain 63##AK054629|WDR63|126820|WD repeat domain 63##BC040265|WDR63|126820|WD repeat domain 63##BX647497|MCOLN3|55283|mucolipin 3##AK314354|MCOLN3|55283|mucolipin 3##NM_001253693|MCOLN3|55283|mucolipin 3##NM_018298|MCOLN3|55283|mucolipin 3##AF387611|C1orf52|148423|chromosome 1 open reading frame 52##AF387612|C1orf52|148423|chromosome 1 open reading frame 52##AY486331|C1orf52|148423|chromosome 1 open reading frame 52##AY486332|C1orf52|148423|chromosome 1 open reading frame 52##BC029538|C1orf52|148423|chromosome 1 open reading frame 52##AK126929|C1orf52|148423|chromosome 1 open reading frame 52##NM_198077|C1orf52|148423|chromosome 1 open reading frame 52##AF105066|BCL10|8915|B-cell CLL/lymphoma 10##AF127386|BCL10|8915|B-cell CLL/lymphoma 10##EF189176|BCL10|8915|B-cell CLL/lymphoma 10##BC053617|BCL10|8915|B-cell CLL/lymphoma 10##BX647306|BCL10|8915|B-cell CLL/lymphoma 10##AK291346|BCL10|8915|B-cell CLL/lymphoma 10##AF100338|BCL10|8915|B-cell CLL/lymphoma 10##AF057700|BCL10|8915|B-cell CLL/lymphoma 10##AF134395|BCL10|8915|B-cell CLL/lymphoma 10##NM_003921|BCL10|8915|B-cell CLL/lymphoma 10	0.0	
chr4	12726280	12726390	reg1024986.p1	5.497	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-1295803	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-2039934	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-2267325	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	759616	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	759640	-	AB463932 AF009801 EU446467 BC111966 NM_001189	819740	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.871574	CTCF.p2:5:0.872
chr5	36690551	36690668	reg1025277.p1	5.497	+	NM_001166695 U03504 AB529121 AY954110 TSC_hg19_v1_chr5_+_36608562	-82113	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	-83881	+	NM_001166696 NM_004172	-84153	+	TSC_hg19_v1_chr5_-_36876762 AK000901	186154	-	TSC_hg19_v1_chr5_+_36876875 NM_015384 NM_133433 AJ627032 AJ640137	186255	+	TSC_hg19_v1_chr5_+_36876945 BC146821 BX640644 BC131490 AK290347 BX538178 BX538177	186461	+	NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK000901|LOC646719|646719|uncharacterized LOC646719##NM_015384|NIPBL|25836|Nipped-B homolog (Drosophila)##NM_133433|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ627032|NIPBL|25836|Nipped-B homolog (Drosophila)##AJ640137|NIPBL|25836|Nipped-B homolog (Drosophila)##BC146821|NIPBL|25836|Nipped-B homolog (Drosophila)##BX640644|NIPBL|25836|Nipped-B homolog (Drosophila)##BC131490|NIPBL|25836|Nipped-B homolog (Drosophila)##AK290347|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538178|NIPBL|25836|Nipped-B homolog (Drosophila)##BX538177|NIPBL|25836|Nipped-B homolog (Drosophila)	0.897005	CTCF.p2:13:0.897
chr6	33129351	33129461	reg1027539.p2	5.497	+	NM_001242524 NM_001242525	-80852	-	NM_002121 AK291986 AK303153 TSC_hg19_v1_chr6_+_33043767 AK301322 J03041 X01426 M83664 AK313305 BC013184 AY831401 AY831402 AY831403 AY804132 AY804142 X03067 AY804140 AY804134 AY804135 AY804137 AY804138 AY804139 AY804143 BC007963 BC015000 AB208978 AY804141 M28200 DQ284441 AY804133 AY804136 AB529034 DQ891050 DQ894229 CU680546 AY656678 AY656679 AY656680 AY831404 BT019780 GQ891549 M28202 M21886	-85603	+	X00457 AB590198 CU679537 DQ893463 DQ896324 AB209058 AK292709 TSC_hg19_v1_chr6_-_33041427 BC009956 M27487 NM_033554	-88038	-	TSC_hg19_v1_chr6_-_33160241 BC053886 NM_001163771 NM_080679 NM_080680 NM_080681	30859	-	TSC_hg19_v1_chr6_-_33168171 BT007280 HQ692844 HQ709179 AB384890	38802	-	M84820 AB209244 X63522 TSC_hg19_v1_chr6_-_33168436 AK225842 BC001167 NM_021976 AK295759	38997	-	NM_001242524|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_001242525|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_002121|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK291986|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK303153|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK301322|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##J03041|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X01426|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M83664|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK313305|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC013184|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831401|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831402|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831403|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804132|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804142|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X03067|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804140|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804134|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804135|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804137|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804138|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804139|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804143|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC007963|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC015000|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AB208978|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804141|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M28200|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ284441|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804133|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804136|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ891050|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ894229|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656678|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656679|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656680|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831404|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BT019780|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##GQ891549|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M28202|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M21886|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X00457|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ893463|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ896324|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AB209058|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AK292709|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##BC009956|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##M27487|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_033554|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##BC053886|COL11A2|1302|collagen, type XI, alpha 2##NM_001163771|COL11A2|1302|collagen, type XI, alpha 2##NM_080679|COL11A2|1302|collagen, type XI, alpha 2##NM_080680|COL11A2|1302|collagen, type XI, alpha 2##NM_080681|COL11A2|1302|collagen, type XI, alpha 2##BT007280|RXRB|6257|retinoid X receptor, beta##M84820|RXRB|6257|retinoid X receptor, beta##AB209244|RXRB|6257|retinoid X receptor, beta##X63522|RXRB|6257|retinoid X receptor, beta##AK225842|RXRB|6257|retinoid X receptor, beta##BC001167|RXRB|6257|retinoid X receptor, beta##NM_021976|RXRB|6257|retinoid X receptor, beta##AK295759|RXRB|6257|retinoid X receptor, beta	0.964158	CTCF.p2:-6:0.964
chr11	103553265	103553417	reg1003390.p2	5.496	+	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	-573142	+	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	-590418	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	-590600	-	NM_001001711 AF429971 AK093336 AX748060 BC022018 BC022017 BC021710 BC021172	353997	+	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	481453	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	481699	-	AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_001001711|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AF429971|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK093336|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022018|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022017|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021710|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021172|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D	0.464745	CTCF.p2:-8:0.465
chr1	174044005	174044121	reg1022418.p1	5.496	+	TSC_hg19_v1_chr1_-_173991524 AB007961	-52548	-	AB095945 BC136784 BC144408 AK122948 NM_172071	-81934	-	AK093501 AX748170 TSC_hg19_v1_chr1_-_173933260	-110845	-	BC041888 NM_014857 TSC_hg19_v1_chr1_+_174128608	84537	+	AK095838 TSC_hg19_v1_chr1_+_174128676 AL157958	84629	+	BC095532 NM_005684 CU688296 CU688298 BC067456 BC067457 BC067458 BC067459 BC067460 BC069460 HQ995526	373167	+	AB095945|RC3H1|149041|ring finger and CCCH-type domains 1##BC136784|RC3H1|149041|ring finger and CCCH-type domains 1##BC144408|RC3H1|149041|ring finger and CCCH-type domains 1##AK122948|RC3H1|149041|ring finger and CCCH-type domains 1##NM_172071|RC3H1|149041|ring finger and CCCH-type domains 1##AK093501|RC3H1|149041|ring finger and CCCH-type domains 1##BC041888|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_014857|RABGAP1L|9910|RAB GTPase activating protein 1-like##AK095838|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL157958|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC095532|GPR52|9293|G protein-coupled receptor 52##NM_005684|GPR52|9293|G protein-coupled receptor 52##BC067456|GPR52|9293|G protein-coupled receptor 52##BC067457|GPR52|9293|G protein-coupled receptor 52##BC067458|GPR52|9293|G protein-coupled receptor 52##BC067459|GPR52|9293|G protein-coupled receptor 52##BC067460|GPR52|9293|G protein-coupled receptor 52##BC069460|GPR52|9293|G protein-coupled receptor 52##HQ995526|GPR52|9293|G protein-coupled receptor 52	0.972287	CTCF.p2:38:0.972
chr1	201978916	201979023	reg1003034.p2	5.496	+	TSC_hg19_v1_chr1_+_201951788 BC012166 AJ242586 DQ896012 EU176398 AJ296161	-27177	+	TSC_hg19_v1_chr1_+_201951775 NM_020216 AK097372 BC001064	-27203	+	NM_006335 BC015098 TSC_hg19_v1_chr1_+_201924640 AK315602 BC009784 BC007106 BC020833 X97544 AF106622 BC000294 BC004439 BC013823	-54331	+	NM_001114309 NM_004433 TSC_hg19_v1_chr1_+_201979714 AK309265 AK312273 U97156 BC003569 U73843 U73844 AF016295	739	+	U66894 TSC_hg19_v1_chr1_+_201979752 AK225446 AF517841	815	+	AK295576 AK313044 TSC_hg19_v1_chr1_+_202092044 BC050334 NM_004767 AK222639 Y16280	113048	+	BC012166|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AJ242586|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##DQ896012|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##EU176398|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AJ296161|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##NM_020216|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AK097372|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##BC001064|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##NM_006335|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC015098|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##AK315602|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC009784|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC007106|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC020833|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##X97544|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##AF106622|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC000294|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC004439|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC013823|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##NM_001114309|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##NM_004433|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK309265|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK312273|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U97156|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##BC003569|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73843|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73844|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF016295|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U66894|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK225446|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF517841|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK295576|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK313044|GPR37L1|9283|G protein-coupled receptor 37 like 1##BC050334|GPR37L1|9283|G protein-coupled receptor 37 like 1##NM_004767|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK222639|GPR37L1|9283|G protein-coupled receptor 37 like 1##Y16280|GPR37L1|9283|G protein-coupled receptor 37 like 1	0.0	
chr1	212923307	212923451	reg1023788.p1	5.496	+	TSC_hg19_v1_chr1_-_212873317 AF255346 NM_018664	-50059	-	TSC_hg19_v1_chr1_-_212873221 BC117489 BC117491	-50149	-	AB463432 HQ258061 TSC_hg19_v1_chr1_-_212873132	-50259	-	AB528354 CU675531 DQ892899 DQ896149 AK222996 AF201941 TSC_hg19_v1_chr1_-_212965111 BC007067 AK223260 AK303250 BC036048 AF255793 AK313730 NM_001042549 NM_015471	41742	-	AK293129 NM_001042552 NM_001042553 NM_001146169 NM_001146170 NM_001146171 AK304557 TSC_hg19_v1_chr1_+_212965255 BC113638 BC117485 BC143956 BC143957 AL832248 BC048115 HQ258161	41839	+	AY640234 BC035742 NM_001024601	97589	-	AF255346|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##NM_018664|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117489|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117491|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##HQ258061|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##DQ892899|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##DQ896149|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK222996|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF201941|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC007067|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK223260|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK303250|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC036048|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF255793|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK313730|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001042549|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_015471|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK293129|TATDN3|128387|TatD DNase domain containing 3##NM_001042552|TATDN3|128387|TatD DNase domain containing 3##NM_001042553|TATDN3|128387|TatD DNase domain containing 3##NM_001146169|TATDN3|128387|TatD DNase domain containing 3##NM_001146170|TATDN3|128387|TatD DNase domain containing 3##NM_001146171|TATDN3|128387|TatD DNase domain containing 3##AK304557|TATDN3|128387|TatD DNase domain containing 3##BC113638|TATDN3|128387|TatD DNase domain containing 3##BC117485|TATDN3|128387|TatD DNase domain containing 3##BC143956|TATDN3|128387|TatD DNase domain containing 3##BC143957|TATDN3|128387|TatD DNase domain containing 3##AL832248|TATDN3|128387|TatD DNase domain containing 3##BC048115|TATDN3|128387|TatD DNase domain containing 3##HQ258161|TATDN3|128387|TatD DNase domain containing 3##AY640234|C1orf227|149643|chromosome 1 open reading frame 227##BC035742|C1orf227|149643|chromosome 1 open reading frame 227##NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227	0.999051	CTCF.p2:-13:0.999
chr15	23107032	23107127	reg1025509.p1	5.496	+	BC025678 NM_001142275	-20237	-	AK057846 BC103705 AK314073 AB590048 TSC_hg19_v1_chr15_-_23086444 NM_144599	-20705	-	TSC_hg19_v1_chr15_-_23034411 AK096305 AK313584 NM_001008860 NM_001008892 NM_001008894 NM_001184888 NM_001184889 NM_030922	-72663	-	TSC_hg19_v1_chr15_-_23115247 BC044583	8169	-	DQ309040 BC048987 TSC_hg19_v1_chr15_-_23208467	101332	-	TSC_hg19_v1_chr15_-_23378205 AK308640	271111	-	BC025678|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##NM_001142275|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##AK057846|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##BC103705|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##AK314073|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##NM_144599|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##AK096305|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AK313584|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001008860|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001008892|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001008894|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001184888|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001184889|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_030922|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##BC044583|LOC283683|283683|uncharacterized LOC283683##DQ309040|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC048987|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##AK308640|HERC2P2|400322|hect domain and RLD 2 pseudogene 2	0.162914	
chr15	50474290	50474406	reg1025909.p2	5.496	+	TSC_hg19_v1_chr15_-_50411492 BC144298 BC144297 NM_024837	-62882	-	AB075819 TSC_hg19_v1_chr15_-_50405521	-68832	-	TSC_hg19_v1_chr15_+_49913254 NM_001144955 NM_020234 BC018028 AF168717 AK290184 BC093073 BC032535	-561099	+	TSC_hg19_v1_chr15_+_50474425 AK290262 NM_001159629 NM_003645 AF096290 AK222859 D88308 AK223145 BC057770 CU691220	142	+	AK308833 NM_002112	83813	-	TSC_hg19_v1_chr15_-_50647062 BC068063 BC009935 AK000900	172721	-	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4##AB075819|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_001144955|DTWD1|56986|DTW domain containing 1##NM_020234|DTWD1|56986|DTW domain containing 1##BC018028|DTWD1|56986|DTW domain containing 1##AF168717|DTWD1|56986|DTW domain containing 1##AK290184|DTWD1|56986|DTW domain containing 1##BC093073|DTWD1|56986|DTW domain containing 1##BC032535|DTWD1|56986|DTW domain containing 1##AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK308833|HDC|3067|histidine decarboxylase##NM_002112|HDC|3067|histidine decarboxylase##BC068063|FLJ10038|55056|uncharacterized protein FLJ10038##BC009935|FLJ10038|55056|uncharacterized protein FLJ10038##AK000900|FLJ10038|55056|uncharacterized protein FLJ10038	0.911622	CTCF.p2:25:0.912
chr20	21484164	21484249	reg1023952.p1	5.496	+	NM_033176 TSC_hg19_v1_chr20_-_21378181	-106092	-	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	-200231	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	-377479	+	NM_002509	10457	-	TSC_hg19_v1_chr20_+_21686296 NM_006192	202088	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	202327	+	NM_033176|NKX2-4|644524|NK2 homeobox 4##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2##BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_002509|NKX2-2|4821|NK2 homeobox 2##NM_006192|PAX1|5075|paired box 1##BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1	0.0	
chr10	23370963	23371043	reg1025927.p1	5.495	+	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	-154022	+	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	-367513	-	AK294817 TSC_hg19_v1_chr10_-_23003038	-367966	-	BC117471 BC130380 NM_012228 BC018030 TSC_hg19_v1_chr10_+_23384507 AF151889 BC066305 AF122004 EU446941	13480	+	AB463998 NM_178161	110455	+	BC035732 NM_153714	262768	-	NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC117471|MSRB2|22921|methionine sulfoxide reductase B2##BC130380|MSRB2|22921|methionine sulfoxide reductase B2##NM_012228|MSRB2|22921|methionine sulfoxide reductase B2##BC018030|MSRB2|22921|methionine sulfoxide reductase B2##AF151889|MSRB2|22921|methionine sulfoxide reductase B2##BC066305|MSRB2|22921|methionine sulfoxide reductase B2##AF122004|MSRB2|22921|methionine sulfoxide reductase B2##EU446941|MSRB2|22921|methionine sulfoxide reductase B2##NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67	0.959156	CTCF.p2:30:0.959
chr10	64413103	64413263	reg1024603.p1	5.495	+	AJ505150 NM_199452	-132977	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-279140	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-384644	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	151359	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	151474	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	162914	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.0	
chr19	41945874	41946024	reg1027116.p2	5.495	+	TSC_hg19_v1_chr19_-_41945831 AK298197 NM_001167869 NM_001167870 NM_001167871 NM_018035	-116	-	TSC_hg19_v1_chr19_-_41945814 BC013323 AK316313	-135	-	TSC_hg19_v1_chr19_-_41945811 AK001103 AK297698	-139	-	NM_001130514	3113	+	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	136628	+	D90276 AK298701 NM_001817	187485	-	AK298197|ATP5SL|55101|ATP5S-like##NM_001167869|ATP5SL|55101|ATP5S-like##NM_001167870|ATP5SL|55101|ATP5S-like##NM_001167871|ATP5SL|55101|ATP5S-like##NM_018035|ATP5SL|55101|ATP5S-like##BC013323|ATP5SL|55101|ATP5S-like##AK316313|ATP5SL|55101|ATP5S-like##AK001103|ATP5SL|55101|ATP5S-like##AK297698|ATP5SL|55101|ATP5S-like##NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4	0.0	
chr20	50317423	50317519	reg1025021.p1	5.495	+	BC110591 BC110592 BC063701 TSC_hg19_v1_chr20_-_50314160	-3393	-	AK304147 AK226146 EU887575 EU887579 TSC_hg19_v1_chr20_-_50179379	-138087	-	EU887574 EU887577 NM_001136021	-138304	-	TSC_hg19_v1_chr20_-_50384875 AB385363 AB014511 AK299064	67407	-	TSC_hg19_v1_chr20_-_50384925 NM_006045	67457	-	AY170621 AY170622 AY172738 BC111714 AK001666 NM_020436	101525	-	BC110591|ATP9A|10079|ATPase, class II, type 9A##BC110592|ATP9A|10079|ATPase, class II, type 9A##BC063701|ATP9A|10079|ATPase, class II, type 9A##AK304147|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##AK226146|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887575|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887579|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##AB014511|ATP9A|10079|ATPase, class II, type 9A##AK299064|ATP9A|10079|ATPase, class II, type 9A##NM_006045|ATP9A|10079|ATPase, class II, type 9A##AY170621|SALL4|57167|sal-like 4 (Drosophila)##AY170622|SALL4|57167|sal-like 4 (Drosophila)##AY172738|SALL4|57167|sal-like 4 (Drosophila)##BC111714|SALL4|57167|sal-like 4 (Drosophila)##AK001666|SALL4|57167|sal-like 4 (Drosophila)##NM_020436|SALL4|57167|sal-like 4 (Drosophila)	0.951375	CTCF.p2:6:0.951
chr19	36205997	36206139	reg1027167.p1	5.494	+	AF130255 NM_014383	-2239	+	BC107097 BC107098 NM_007000 AF085807	-48352	+	TSC_hg19_v1_chr19_+_36139253 D28426 BC002478 X54473 X13923	-66816	+	TSC_hg19_v1_chr19_+_36208923 AJ007041 NM_014727	2862	+	TSC_hg19_v1_chr19_+_36209125 AF186605	3118	+	BC126481 BC126483 BC144205 AX775837 AK026226 NM_024660	27262	-	AF130255|ZBTB32|27033|zinc finger and BTB domain containing 32##NM_014383|ZBTB32|27033|zinc finger and BTB domain containing 32##BC107097|UPK1A|11045|uroplakin 1A##BC107098|UPK1A|11045|uroplakin 1A##NM_007000|UPK1A|11045|uroplakin 1A##AF085807|UPK1A|11045|uroplakin 1A##D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##AF186605|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##BC126481|IGFLR1|79713|IGF-like family receptor 1##BC126483|IGFLR1|79713|IGF-like family receptor 1##BC144205|IGFLR1|79713|IGF-like family receptor 1##AX775837|IGFLR1|79713|IGF-like family receptor 1##AK026226|IGFLR1|79713|IGF-like family receptor 1##NM_024660|IGFLR1|79713|IGF-like family receptor 1	0.017749	
chr12	56995337	56995447	reg1027230.p1	5.493	+	TSC_hg19_v1_chr12_+_56915603 NM_002898 BC072679 AK308885 AK293315 AK304540 D28483 AK299580 BC027863 CU693300	-79695	+	AK289471 BC025661 BC036929 AK000467 AF110330 AK303772 AF223944 AK294822 BC119767 BC119768 BC059370 BC048344 NM_013267	-113352	-	NM_207344 TSC_hg19_v1_chr12_+_56862350 AF451989 AK300594 AL832247 BC020844 AK291920 BX647957 AK074733 AF289571	-133040	+	AF000422 TSC_hg19_v1_chr12_-_57006969	11524	-	AK023830 TSC_hg19_v1_chr12_-_57009380	13984	-	AK023842 TSC_hg19_v1_chr12_-_57024088	28650	-	NM_002898|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC072679|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK308885|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK293315|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK304540|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##D28483|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK299580|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##BC027863|RBMS2|5939|RNA binding motif, single stranded interacting protein 2##AK289471|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC025661|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC036929|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK000467|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF110330|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK303772|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AF223944|GLS2|27165|glutaminase 2 (liver, mitochondrial)##AK294822|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119767|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC119768|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC059370|GLS2|27165|glutaminase 2 (liver, mitochondrial)##BC048344|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_013267|GLS2|27165|glutaminase 2 (liver, mitochondrial)##NM_207344|SPRYD4|283377|SPRY domain containing 4##AF451989|SPRYD4|283377|SPRY domain containing 4##AK300594|SPRYD4|283377|SPRY domain containing 4##AL832247|SPRYD4|283377|SPRY domain containing 4##BC020844|SPRYD4|283377|SPRY domain containing 4##AK291920|SPRYD4|283377|SPRY domain containing 4##BX647957|SPRYD4|283377|SPRY domain containing 4##AK074733|SPRYD4|283377|SPRY domain containing 4##AF289571|SPRYD4|283377|SPRY domain containing 4##AF000422|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023830|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023842|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A	0.650007	CTCF.p2:-3:0.650
chr2	179994352	179994503	reg1006136.p1	5.493	+	AL832777 NM_173648	-79642	-	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-322324	-	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	-334726	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	134978	-	AK057999 NM_001113398	432887	-	AK096822 NM_001113397	616341	-	AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##X98114|TTN|7273|titin##X98115|TTN|7273|titin##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B##AK096822|ZNF385B|151126|zinc finger protein 385B##NM_001113397|ZNF385B|151126|zinc finger protein 385B	0.0	
chr4	101828711	101828844	reg1027383.p1	5.493	+	CU676062 AB590686 AB034695 AK222741 AK304568 AK291831 BC017781 AF205940 AK026875 AK313504 NM_001159694 NM_016242	-389617	-	AL832277 BC013592 TSC_hg19_v1_chr4_-_101111626 AK312926 AK094236 NM_145244	-717147	-	TSC_hg19_v1_chr4_+_100871641 AK123926	-957131	+	AB385587 AB451338 AB451487 AM393486 AM393713 CU693026 AY904364 BC025714 TSC_hg19_v1_chr4_-_102268080 L14778	439249	-	TSC_hg19_v1_chr4_-_102268343 AL353950	439595	-	AK290532 TSC_hg19_v1_chr4_-_102268547	439738	-	AB034695|EMCN|51705|endomucin##AK222741|EMCN|51705|endomucin##AK304568|EMCN|51705|endomucin##AK291831|EMCN|51705|endomucin##BC017781|EMCN|51705|endomucin##AF205940|EMCN|51705|endomucin##AK026875|EMCN|51705|endomucin##AK313504|EMCN|51705|endomucin##NM_001159694|EMCN|51705|endomucin##NM_016242|EMCN|51705|endomucin##AL832277|DDIT4L|115265|DNA-damage-inducible transcript 4-like##BC013592|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK312926|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK094236|DDIT4L|115265|DNA-damage-inducible transcript 4-like##NM_145244|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK123926|LOC256880|256880|uncharacterized LOC256880##AB451338|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AB451487|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393486|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393713|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AY904364|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##BC025714|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##L14778|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AL353950|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AK290532|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	0.971565	CTCF.p2:-2:0.972
chr6	117293275	117293381	reg1024699.p2	5.493	+	BC039248 NM_173560	-94953	+	AF502962 NM_148963 AY435125 AY435126 AY435127	-143121	-	TSC_hg19_v1_chr6_-_117086883 BC038997 NM_001085480	-206467	-	AY056583 NM_153453 TSC_hg19_v1_chr6_+_117586720 AJ578053 NM_182645 BC100798 BC100799 BC118545 BC118622 BC069316 AK096878	293483	+	M34353 NM_002944 TSC_hg19_v1_chr6_-_117747031	453703	-	TSC_hg19_v1_chr6_+_117803805 BC035671 NM_173674 AK095973	510509	+	BC039248|RFX6|222546|regulatory factor X, 6##NM_173560|RFX6|222546|regulatory factor X, 6##AF502962|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##NM_148963|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435125|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435126|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##AY435127|GPRC6A|222545|G protein-coupled receptor, family C, group 6, member A##BC038997|FAM162B|221303|family with sequence similarity 162, member B##NM_001085480|FAM162B|221303|family with sequence similarity 162, member B##AY056583|VGLL2|245806|vestigial like 2 (Drosophila)##NM_153453|VGLL2|245806|vestigial like 2 (Drosophila)##AJ578053|VGLL2|245806|vestigial like 2 (Drosophila)##NM_182645|VGLL2|245806|vestigial like 2 (Drosophila)##BC100798|VGLL2|245806|vestigial like 2 (Drosophila)##BC100799|VGLL2|245806|vestigial like 2 (Drosophila)##BC118545|VGLL2|245806|vestigial like 2 (Drosophila)##BC118622|VGLL2|245806|vestigial like 2 (Drosophila)##BC069316|VGLL2|245806|vestigial like 2 (Drosophila)##AK096878|VGLL2|245806|vestigial like 2 (Drosophila)##M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##BC035671|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##NM_173674|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AK095973|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1	0.447144	CTCF.p2:-12:0.447
chr10	104513044	104513154	reg1025103.p2	5.492	+	TSC_hg19_v1_chr10_+_104503740 AY656172	-9341	+	TSC_hg19_v1_chr10_+_104503724 NM_001083913	-9374	+	TSC_hg19_v1_chr10_+_104503723 AK308843 AK316452	-9382	+	NM_017787 TSC_hg19_v1_chr10_+_104535970 AY656171 AK056285 BC113857 BC114465	22856	+	TSC_hg19_v1_chr10_+_104590431 CU687687	77345	+	AK308466 BT020000 CU687686 BC062997 BC063388 BC032843 M14564 TSC_hg19_v1_chr10_-_104597171 AK289898 AK094106 AK312235 NM_000102	84085	-	AY656172|C10orf26|54838|chromosome 10 open reading frame 26##NM_001083913|C10orf26|54838|chromosome 10 open reading frame 26##AK308843|C10orf26|54838|chromosome 10 open reading frame 26##AK316452|C10orf26|54838|chromosome 10 open reading frame 26##NM_017787|C10orf26|54838|chromosome 10 open reading frame 26##AY656171|C10orf26|54838|chromosome 10 open reading frame 26##AK056285|C10orf26|54838|chromosome 10 open reading frame 26##BC113857|C10orf26|54838|chromosome 10 open reading frame 26##BC114465|C10orf26|54838|chromosome 10 open reading frame 26##AK308466|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BT020000|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC062997|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC063388|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC032843|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##M14564|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK289898|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK094106|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK312235|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##NM_000102|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1	0.860272	CTCF.p2:0:0.860
chr19	41304060	41304234	reg1023420.p1	5.492	+	TSC_hg19_v1_chr19_+_41284175 BC046927 AK291385 AF165522 BC033081 CU692346 EU832633 EU832708 AF498935	-19927	+	TSC_hg19_v1_chr19_+_41284141 NM_016154	-20043	+	NM_006533 X75450 BC005910 BT007044 CR541648	-22783	+	TSC_hg19_v1_chr19_+_41305091 NM_080732 AL832506	919	+	TSC_hg19_v1_chr19_+_41305105 AK074408 BC001723	976	+	NM_053046 BC036051 AK098182	1244	+	BC046927|RAB4B|53916|RAB4B, member RAS oncogene family##AK291385|RAB4B-EGLN2|100529264|RAB4B-EGLN2 readthrough##AF165522|RAB4B|53916|RAB4B, member RAS oncogene family##BC033081|RAB4B|53916|RAB4B, member RAS oncogene family##EU832633|RAB4B|53916|RAB4B, member RAS oncogene family##EU832708|RAB4B|53916|RAB4B, member RAS oncogene family##AF498935|RAB4B|53916|RAB4B, member RAS oncogene family##NM_016154|RAB4B|53916|RAB4B, member RAS oncogene family##NM_006533|MIA|8190|melanoma inhibitory activity##X75450|MIA|8190|melanoma inhibitory activity##BC005910|MIA|8190|melanoma inhibitory activity##BT007044|MIA|8190|melanoma inhibitory activity##CR541648|MIA|8190|melanoma inhibitory activity##NM_080732|EGLN2|112398|egl nine homolog 2 (C. elegans)##AL832506|EGLN2|112398|egl nine homolog 2 (C. elegans)##AK074408|EGLN2|112398|egl nine homolog 2 (C. elegans)##BC001723|EGLN2|112398|egl nine homolog 2 (C. elegans)##NM_053046|EGLN2|112398|egl nine homolog 2 (C. elegans)##BC036051|EGLN2|112398|egl nine homolog 2 (C. elegans)##AK098182|EGLN2|112398|egl nine homolog 2 (C. elegans)	0.300136	CTCF.p2:5:0.300
chr2	208206653	208206771	reg1027044.p2	5.492	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-175087	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-176056	-	BC112076 BC112078 NM_173077 AJ422118	-402412	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	187931	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	188009	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	188069	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.062085	
chr3	125917193	125917323	reg1027758.p1	5.492	+	AF052732 BC027241 AK222535 AK222694 TSC_hg19_v1_chr3_-_125899430 AK294392 AK294530 AB209299 NM_012190	-17815	-	TSC_hg19_v1_chr3_-_125899364 AK307699 AK308112	-17886	-	NM_001164475 AK298070	-96864	-	TSC_hg19_v1_chr3_-_126076252 NM_014079 BC036733	158957	-	AK097402 NM_182628 TSC_hg19_v1_chr3_+_126113866	196565	+	TSC_hg19_v1_chr3_-_126194735 AY936556	277467	-	AF052732|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##BC027241|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222535|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222694|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294392|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294530|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AB209299|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##NM_012190|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK307699|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK308112|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##NM_001164475|SLC41A3|54946|solute carrier family 41, member 3##AK298070|SLC41A3|54946|solute carrier family 41, member 3##NM_014079|KLF15|28999|Kruppel-like factor 15##BC036733|KLF15|28999|Kruppel-like factor 15##AK097402|CCDC37|348807|coiled-coil domain containing 37##NM_182628|CCDC37|348807|coiled-coil domain containing 37##AY936556|ZXDC|79364|ZXD family zinc finger C	0.643523	CTCF.p2:0:0.644
chr5	118747612	118747765	reg1001173.p1	5.492	+	TSC_hg19_v1_chr5_+_118691713 AF099935 AK001850 AF099936 CU675493	-55950	+	BC007014 NM_014350 BC005352 TSC_hg19_v1_chr5_+_118691687	-56070	+	AF070671 TSC_hg19_v1_chr5_+_118604523	-143171	+	TSC_hg19_v1_chr5_+_118788215 NM_000414 NM_001199292 AK301212 AK312449 NM_001199291 BC003098 AK293254 AB208932 X87176 AK299685 AK298075 CU678374 DQ891866 DQ895055	40508	+	AF427126 AY692447 NM_001163991 NM_182761 BC040622 BC128242 BC128243	217628	+	BC011941 TSC_hg19_v1_chr5_-_119740564	992862	-	AF099935|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001850|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099936|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC007014|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_014350|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC005352|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF070671|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_000414|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199292|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK301212|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK312449|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199291|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC003098|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK293254|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##X87176|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK299685|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK298075|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ891866|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ895055|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AF427126|FAM170A|340069|family with sequence similarity 170, member A##AY692447|FAM170A|340069|family with sequence similarity 170, member A##NM_001163991|FAM170A|340069|family with sequence similarity 170, member A##NM_182761|FAM170A|340069|family with sequence similarity 170, member A##BC040622|FAM170A|340069|family with sequence similarity 170, member A##BC128242|FAM170A|340069|family with sequence similarity 170, member A##BC128243|FAM170A|340069|family with sequence similarity 170, member A	0.013486	
chr11	125322673	125322774	reg1026676.p1	5.491	+	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	-288097	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	-288145	+	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	-341254	-	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	43418	-	TSC_hg19_v1_chr11_+_125439294 NM_001007277 NM_004879	116572	+	TSC_hg19_v1_chr11_+_125439332 AB209820	116602	+	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_001007277|EI24|9538|etoposide induced 2.4 mRNA##NM_004879|EI24|9538|etoposide induced 2.4 mRNA##AB209820|EI24|9538|etoposide induced 2.4 mRNA	0.944182	CTCF.p2:10:0.944
chr22	31481239	31481390	reg1029368.p1	5.491	+	AK128627 AK295418 NM_001207018 TSC_hg19_v1_chr22_+_31481009	-313	+	AK304084 NM_001207017 TSC_hg19_v1_chr22_+_31478895	-2442	+	TSC_hg19_v1_chr22_+_31477303 NM_006932 NM_134269 NM_134270 AK128719 AF064238 AJ010306 AY061971 AY061972 Y13492 AK096953 AK293681 BC034237 AK300854	-4032	+	TSC_hg19_v1_chr22_+_31487319 AK301289 AK307627 AK225648 Z49989	6010	+	AK092684 AX747671 TSC_hg19_v1_chr22_+_31489351 AK095930 AK300064 AK309502 AK095916	8040	+	TSC_hg19_v1_chr22_-_31503490 CU680602 BC013421 BC030236 BC042299 BC068004 NM_080430 AK308582	22218	-	AK128627|SMTN|6525|smoothelin##AK295418|SMTN|6525|smoothelin##NM_001207018|SMTN|6525|smoothelin##AK304084|SMTN|6525|smoothelin##NM_001207017|SMTN|6525|smoothelin##NM_006932|SMTN|6525|smoothelin##NM_134269|SMTN|6525|smoothelin##NM_134270|SMTN|6525|smoothelin##AK128719|SMTN|6525|smoothelin##AF064238|SMTN|6525|smoothelin##AJ010306|SMTN|6525|smoothelin##AY061971|SMTN|6525|smoothelin##AY061972|SMTN|6525|smoothelin##Y13492|SMTN|6525|smoothelin##AK096953|SMTN|6525|smoothelin##AK293681|SMTN|6525|smoothelin##BC034237|SMTN|6525|smoothelin##AK300854|SMTN|6525|smoothelin##AK301289|SMTN|6525|smoothelin##AK307627|SMTN|6525|smoothelin##AK225648|SMTN|6525|smoothelin##Z49989|SMTN|6525|smoothelin##AK092684|SMTN|6525|smoothelin##AK095930|SMTN|6525|smoothelin##AK300064|SMTN|6525|smoothelin##AK309502|SMTN|6525|smoothelin##AK095916|SMTN|6525|smoothelin##BC013421|SELM|140606|selenoprotein M##BC030236|SELM|140606|selenoprotein M##BC042299|SELM|140606|selenoprotein M##BC068004|SELM|140606|selenoprotein M##NM_080430|SELM|140606|selenoprotein M	0.347716	CTCF.p2:32:0.348
chr3	134571790	134571915	reg1014345.p1	5.490	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-57551	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-57701	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-202007	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	1112679	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	1112768	+	NM_181897 AK316258 L12146	1169766	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.106745	
chr3	4872938	4873118	reg1024399.p2	5.490	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-337832	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-337900	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-337997	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	148088	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	148153	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	148326	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.0	
chr1	212629155	212629309	reg1001299.p1	5.489	+	TSC_hg19_v1_chr1_+_212606264 AF173937 NM_013349 AK074431 AK223135 AY762102 BC008823 AB126219 AF049672	-22920	+	TSC_hg19_v1_chr1_-_212588248 AK297200 NM_001198862 AK024066 NM_018252	-40980	-	TSC_hg19_v1_chr1_-_212588235 AK001736	-40997	-	NM_001030287	109443	+	NM_001040619 NM_001206484 NM_001206488 NM_001674 TSC_hg19_v1_chr1_+_212782102 AK294296	152803	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	152875	+	AF173937|NENF|29937|neudesin neurotrophic factor##NM_013349|NENF|29937|neudesin neurotrophic factor##AK074431|NENF|29937|neudesin neurotrophic factor##AK223135|NENF|29937|neudesin neurotrophic factor##AY762102|NENF|29937|neudesin neurotrophic factor##BC008823|NENF|29937|neudesin neurotrophic factor##AB126219|NENF|29937|neudesin neurotrophic factor##AF049672|NENF|29937|neudesin neurotrophic factor##AK297200|TMEM206|55248|transmembrane protein 206##NM_001198862|TMEM206|55248|transmembrane protein 206##AK024066|TMEM206|55248|transmembrane protein 206##NM_018252|TMEM206|55248|transmembrane protein 206##AK001736|TMEM206|55248|transmembrane protein 206##NM_001030287|ATF3|467|activating transcription factor 3##NM_001040619|ATF3|467|activating transcription factor 3##NM_001206484|ATF3|467|activating transcription factor 3##NM_001206488|ATF3|467|activating transcription factor 3##NM_001674|ATF3|467|activating transcription factor 3##AK294296|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3	0.0	
chr18	34522366	34522509	reg1026433.p2	5.489	+	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-113317	-	TSC_hg19_v1_chr18_+_34409093 AK304230 AL832625 NM_020776 BC038772 AK292288 BX648875 BC045585 AB587550 AM393103 AM393380 BC146691	-113354	+	AB073382 TSC_hg19_v1_chr18_-_34408948	-113485	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	623259	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	623562	-	TSC_hg19_v1_chr18_-_36915657 D28405	2393219	-	BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK304230|KIAA1328|57536|KIAA1328##AL832625|KIAA1328|57536|KIAA1328##NM_020776|KIAA1328|57536|KIAA1328##AK292288|KIAA1328|57536|KIAA1328##BX648875|KIAA1328|57536|KIAA1328##BC045585|KIAA1328|57536|KIAA1328##AM393103|KIAA1328|57536|KIAA1328##AM393380|KIAA1328|57536|KIAA1328##BC146691|KIAA1328|57536|KIAA1328##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4	0.0	
chr22	36882802	36882911	reg1022243.p1	5.489	+	TSC_hg19_v1_chr22_-_36877665 BC013726 BC050610 AF480262 NM_012473 CR456601	-5177	-	TSC_hg19_v1_chr22_-_36784062 NM_002473	-98798	-	TSC_hg19_v1_chr22_-_36784013 AK304840 AK291609 AB191263	-98848	-	TSC_hg19_v1_chr22_-_36903081 BC027716 BC015726	20202	-	AK025714 AK225347 TSC_hg19_v1_chr22_-_36903088 AK315555 NM_024955 BC040351 NM_001102371	20261	-	BC093686 BC101477 BC093100 TSC_hg19_v1_chr22_-_36925162	42295	-	BC013726|TXN2|25828|thioredoxin 2##BC050610|TXN2|25828|thioredoxin 2##AF480262|TXN2|25828|thioredoxin 2##NM_012473|TXN2|25828|thioredoxin 2##CR456601|TXN2|25828|thioredoxin 2##NM_002473|MYH9|4627|myosin, heavy chain 9, non-muscle##AK304840|MYH9|4627|myosin, heavy chain 9, non-muscle##AK291609|MYH9|4627|myosin, heavy chain 9, non-muscle##AB191263|MYH9|4627|myosin, heavy chain 9, non-muscle##BC027716|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC015726|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC093686|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##BC101477|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##BC093100|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D	0.868423	CTCF.p2:4:0.868
chr10	13262051	13262170	reg1026107.p1	5.488	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	-58542	+	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	-119965	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	-218411	-	BC018068 NM_145314	14217	-	NM_001037537	79635	-	TSC_hg19_v1_chr10_-_13342061 CR542055 DQ891007 DQ894185	79939	-	NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##BC018068|UCMA|221044|upper zone of growth plate and cartilage matrix associated##NM_145314|UCMA|221044|upper zone of growth plate and cartilage matrix associated##NM_001037537|PHYH|5264|phytanoyl-CoA 2-hydroxylase##CR542055|PHYH|5264|phytanoyl-CoA 2-hydroxylase##DQ891007|PHYH|5264|phytanoyl-CoA 2-hydroxylase##DQ894185|PHYH|5264|phytanoyl-CoA 2-hydroxylase	0.223546	CTCF.p2:0:0.224
chr13	25569488	25569617	reg1024597.p1	5.488	+	TSC_hg19_v1_chr13_-_25497054 NM_018451	-72483	-	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	-72583	-	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	-231233	+	NM_030979 AL136900 AK313336 BC045608 BC027617 AF132026 DQ892103 DQ895297	100753	+	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	176108	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	176265	-	NM_018451|CENPJ|55835|centromere protein J##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##NM_030979|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AL136900|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK313336|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC045608|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC027617|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AF132026|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ892103|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ895297|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A	0.897079	CTCF.p2:-14:0.897
chr13	36392845	36392965	reg1025205.p1	5.488	+	AK294737 NM_001204197 TSC_hg19_v1_chr13_+_36050945 AK315939	-341980	+	BC028170 AB593021 TSC_hg19_v1_chr13_-_36050827 AB593022 AK313185 AB073388 NM_005584	-342109	-	TSC_hg19_v1_chr13_+_35516429 NM_015678 AF467288	-876447	+	AK299059 AK311183 AK295777 TSC_hg19_v1_chr13_-_36429805 CR627093 AK308925 AK311434 AK311438 AK311195 NM_001195415 NM_001195416 NM_001195430	36992	-	TSC_hg19_v1_chr13_-_36705434 AB002367 BC152456	312532	-	AK295102 TSC_hg19_v1_chr13_-_36705468	312568	-	AK294737|NBEA|26960|neurobeachin##NM_001204197|NBEA|26960|neurobeachin##AK315939|NBEA|26960|neurobeachin##BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_015678|NBEA|26960|neurobeachin##AF467288|NBEA|26960|neurobeachin##AK299059|DCLK1|9201|doublecortin-like kinase 1##AK311183|DCLK1|9201|doublecortin-like kinase 1##AK295777|DCLK1|9201|doublecortin-like kinase 1##CR627093|DCLK1|9201|doublecortin-like kinase 1##AK308925|DCLK1|9201|doublecortin-like kinase 1##AK311434|DCLK1|9201|doublecortin-like kinase 1##AK311438|DCLK1|9201|doublecortin-like kinase 1##AK311195|DCLK1|9201|doublecortin-like kinase 1##NM_001195415|DCLK1|9201|doublecortin-like kinase 1##NM_001195416|DCLK1|9201|doublecortin-like kinase 1##NM_001195430|DCLK1|9201|doublecortin-like kinase 1##AB002367|DCLK1|9201|doublecortin-like kinase 1##BC152456|DCLK1|9201|doublecortin-like kinase 1##AK295102|DCLK1|9201|doublecortin-like kinase 1	0.965606	CTCF.p2:-10:0.966
chr15	57852144	57852278	reg1027318.p1	5.488	+	AK056673 AK307410 NM_001252335 NM_032866 TSC_hg19_v1_chr15_+_57668732 AY274808 BC030995 AY610514	-183494	+	TSC_hg19_v1_chr15_+_57511630 AK294991 AK304007 AK311359 AK308101 NM_207040 BX537967 AM393573	-340544	+	TSC_hg19_v1_chr15_+_57210977 M83233	-641211	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	31954	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	146675	+	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	146769	+	AK056673|CGNL1|84952|cingulin-like 1##AK307410|CGNL1|84952|cingulin-like 1##NM_001252335|CGNL1|84952|cingulin-like 1##NM_032866|CGNL1|84952|cingulin-like 1##AY274808|CGNL1|84952|cingulin-like 1##BC030995|CGNL1|84952|cingulin-like 1##AY610514|CGNL1|84952|cingulin-like 1##AK294991|TCF12|6938|transcription factor 12##AK304007|TCF12|6938|transcription factor 12##AK311359|TCF12|6938|transcription factor 12##AK308101|TCF12|6938|transcription factor 12##NM_207040|TCF12|6938|transcription factor 12##BX537967|TCF12|6938|transcription factor 12##AM393573|TCF12|6938|transcription factor 12##M83233|TCF12|6938|transcription factor 12##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M	0.969958	CTCF.p2:-8:0.970
chr16	34666576	34666696	reg1025866.p1	5.488	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-1404503	+	AL133588 NM_016212	-1405122	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-1461038	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	11988636	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	11988670	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	12056426	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.961884	CTCF.p2:2:0.866
chr1	94929417	94929509	reg1023824.p2	5.488	+	AK296791 TSC_hg19_v1_chr1_+_94883971 AK302714 AK308159 BC068509 BC009712 X58528 AB529219 CU679455 BT006644 M81182	-45462	+	TSC_hg19_v1_chr1_+_94883966 NM_001122674 NM_002858	-45515	+	TSC_hg19_v1_chr1_-_94703252 BC067839 NM_004815	-226184	-	AF497569 AF497570 BT019808 CR541792 AB528376 AF487337 DQ892755 M16553 TSC_hg19_v1_chr1_-_95007316 M27436 J02931 AK312638 AK310918 AY940729 BC011029 NM_001178096 NM_001993	77812	-	NM_001114106 AK303906 TSC_hg19_v1_chr1_+_95285935 BC033858 AX721168 AK301288 AK316123 AK313574	356491	+	NM_152369 TSC_hg19_v1_chr1_+_95286156 BC053877	356679	+	AK296791|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK302714|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK308159|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC068509|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC009712|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##X58528|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BT006644|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##M81182|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_001122674|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_002858|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC067839|ARHGAP29|9411|Rho GTPase activating protein 29##NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29##AF497569|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF497570|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BT019808|F3|2152|coagulation factor III (thromboplastin, tissue factor)##CR541792|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF487337|F3|2152|coagulation factor III (thromboplastin, tissue factor)##DQ892755|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M16553|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M27436|F3|2152|coagulation factor III (thromboplastin, tissue factor)##J02931|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK312638|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK310918|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AY940729|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BC011029|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001178096|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001993|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001114106|SLC44A3|126969|solute carrier family 44, member 3##AK303906|SLC44A3|126969|solute carrier family 44, member 3##BC033858|SLC44A3|126969|solute carrier family 44, member 3##AK301288|SLC44A3|126969|solute carrier family 44, member 3##AK316123|SLC44A3|126969|solute carrier family 44, member 3##AK313574|SLC44A3|126969|solute carrier family 44, member 3##NM_152369|SLC44A3|126969|solute carrier family 44, member 3##BC053877|SLC44A3|126969|solute carrier family 44, member 3	0.093445	
chr2	159892686	159892793	reg1027115.p2	5.488	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	-67592	+	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	-240904	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-579156	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	250409	-	AK127551 BC107570 TSC_hg19_v1_chr2_-_160472070	579275	-	BX647250 AL834381 TSC_hg19_v1_chr2_-_160473021 NM_013450 AB040909	580280	-	BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	0.892353	CTCF.p2:-4:0.892
chr3	179601003	179601160	reg1026302.p1	5.488	+	TSC_hg19_v1_chr3_+_179370901 NM_003940 U75362 BC016146 AK290338 AM393315 AM393392 AM393610 AM393780 DQ892472 DQ895684	-230186	+	TSC_hg19_v1_chr3_+_179322594 NM_001199957 NM_001199958 NM_002492 BX648034 BC005271 BC009796 AK313822 AF047181 BC093071 BC017909 CU679497	-278488	+	AY212270 BC032522 TSC_hg19_v1_chr3_-_179322427 BC021575 NM_020409 NM_177988	-278659	-	AB032593 NM_016559 AB032592 TSC_hg19_v1_chr3_-_179754937 AK299633 AK294501 AK314283 BC036183	153645	-	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	718922	+	AB075860 TSC_hg19_v1_chr3_+_180320970	719882	+	NM_003940|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##U75362|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##BC016146|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AK290338|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393315|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393392|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393610|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393780|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ892472|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ895684|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##NM_001199957|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_001199958|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AY212270|MRPL47|57129|mitochondrial ribosomal protein L47##BC032522|MRPL47|57129|mitochondrial ribosomal protein L47##BC021575|MRPL47|57129|mitochondrial ribosomal protein L47##NM_020409|MRPL47|57129|mitochondrial ribosomal protein L47##NM_177988|MRPL47|57129|mitochondrial ribosomal protein L47##AB032593|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_016559|PEX5L|51555|peroxisomal biogenesis factor 5-like##AB032592|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK299633|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK294501|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK314283|PEX5L|51555|peroxisomal biogenesis factor 5-like##BC036183|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##AB075860|TTC14|151613|tetratricopeptide repeat domain 14	0.060918	
chr5	52082815	52082940	reg1028839.p1	5.488	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	-1403624	+	BC031213 NM_002202	-1403920	+	TSC_hg19_v1_chr5_+_49962920 AB463183 AM393004	-2119950	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	1112	+	AK025729 BC007650 TSC_hg19_v1_chr5_+_52095991 BC005889 BC007249 AF132951 AK312633 AF139828 BC022789	13109	+	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	202243	+	AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##BC031213|ISL1|3670|ISL LIM homeobox 1##NM_002202|ISL1|3670|ISL LIM homeobox 1##AM393004|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1##AK025729|PELO|53918|pelota homolog (Drosophila)##BC007650|PELO|53918|pelota homolog (Drosophila)##BC005889|PELO|53918|pelota homolog (Drosophila)##BC007249|PELO|53918|pelota homolog (Drosophila)##AF132951|PELO|53918|pelota homolog (Drosophila)##AK312633|PELO|53918|pelota homolog (Drosophila)##AF139828|PELO|53918|pelota homolog (Drosophila)##BC022789|PELO|53918|pelota homolog (Drosophila)##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	0.0	
chr19	33726559	33726698	reg1002488.p2	5.487	+	CU690138 AK316594 TSC_hg19_v1_chr19_-_33716685 BC035627 AK307527 AB037670 AJ277731 BC022457 NM_019849	-9946	-	TSC_hg19_v1_chr19_+_33697959 AF085860	-28632	+	AB009462 NM_002333 BC007408 TSC_hg19_v1_chr19_+_33685676 EU176387 AK296536	-41025	+	AB590467 TSC_hg19_v1_chr19_-_33793398	66735	-	BC027902 BC063874 NM_004364 TSC_hg19_v1_chr19_-_33793437	66805	-	TSC_hg19_v1_chr19_-_33793441 Y11525	66827	-	AK316594|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##BC035627|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##AK307527|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##AB037670|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##AJ277731|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##BC022457|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##NM_019849|SLC7A10|56301|solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10##AF085860|LRP3|4037|low density lipoprotein receptor-related protein 3##AB009462|LRP3|4037|low density lipoprotein receptor-related protein 3##NM_002333|LRP3|4037|low density lipoprotein receptor-related protein 3##BC007408|LRP3|4037|low density lipoprotein receptor-related protein 3##EU176387|LRP3|4037|low density lipoprotein receptor-related protein 3##AK296536|LRP3|4037|low density lipoprotein receptor-related protein 3##BC027902|CEBPA|1050|CCAAT/enhancer binding protein (C/EBP), alpha##BC063874|CEBPA|1050|CCAAT/enhancer binding protein (C/EBP), alpha##NM_004364|CEBPA|1050|CCAAT/enhancer binding protein (C/EBP), alpha##Y11525|CEBPA|1050|CCAAT/enhancer binding protein (C/EBP), alpha	0.0	
chr5	109750250	109750341	reg1024075.p2	5.487	+	AK314090 TSC_hg19_v1_chr5_+_109025749 BC142656 BC142696	-724536	+	D63998 TSC_hg19_v1_chr5_+_109025627	-724654	+	TSC_hg19_v1_chr5_+_109025138 NM_002372	-725150	+	AK296542 BC042563 BX648527 NM_001039763	312112	-	TSC_hg19_v1_chr5_+_110074720 AK091427	324428	+	TSC_hg19_v1_chr5_+_110074741 AK300123 BC017169 NM_138773 M74089 AK290217 AB529063	324485	+	AK314090|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##BC142656|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##BC142696|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##D63998|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##AK296542|TMEM232|642987|transmembrane protein 232##BC042563|TMEM232|642987|transmembrane protein 232##BX648527|TMEM232|642987|transmembrane protein 232##NM_001039763|TMEM232|642987|transmembrane protein 232##AK091427|SLC25A46|91137|solute carrier family 25, member 46##AK300123|SLC25A46|91137|solute carrier family 25, member 46##BC017169|SLC25A46|91137|solute carrier family 25, member 46##NM_138773|SLC25A46|91137|solute carrier family 25, member 46##M74089|SLC25A46|91137|solute carrier family 25, member 46##AK290217|SLC25A46|91137|solute carrier family 25, member 46	0.604017	CTCF.p2:-8:0.604
chr12	107076730	107076874	reg1025191.p1	5.486	+	NM_001206691 AB095365 AK302837 AB044245	-81871	+	AB095366 NM_213594 TSC_hg19_v1_chr12_+_106976698 AK291445	-100111	+	NM_001160708 AK122713	-324933	+	BC028582 NM_032491 AF332192 AK315698 BC030644 CU688514 CU688962 DQ890831 DQ893986	1731	+	TSC_hg19_v1_chr12_+_107168357 NM_018157 BC132689 BC144056 BC034220 AK001482 AY221116	91660	+	TSC_hg19_v1_chr12_+_107349591 NM_152261	272795	+	NM_001206691|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095365|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK302837|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB044245|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095366|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_213594|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK291445|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_001160708|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AK122713|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BC028582|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_032491|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AF332192|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK315698|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##BC030644|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ890831|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ893986|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_018157|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC132689|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC144056|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC034220|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AK001482|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AY221116|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##NM_152261|C12orf23|90488|chromosome 12 open reading frame 23	0.472195	CTCF.p2:3:0.472
chr1	22192591	22192735	reg1024957.p1	5.486	+	AK127275 NM_001013693 BC146860	-53857	+	TSC_hg19_v1_chr1_-_22109701 AK026930 NM_001032730 NM_032236	-82964	-	TSC_hg19_v1_chr1_-_22109643 BC103724 BC067261	-83029	-	TSC_hg19_v1_chr1_-_22263804 X62515 NM_005529 M85289	71103	-	NM_007352 AK092382 AK308518 AX747509 BC005216 M18692 AK315798 AK308510 M16630	110816	+	BC005918 BC015103 D00306 NM_005747 BC007028 AK225620 AK308514 BC008383 CU675183 CU678941 DQ893182 DQ896490	135494	+	AK127275|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001013693|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##BC146860|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001032730|USP48|84196|ubiquitin specific peptidase 48##NM_032236|USP48|84196|ubiquitin specific peptidase 48##BC103724|USP48|84196|ubiquitin specific peptidase 48##BC067261|USP48|84196|ubiquitin specific peptidase 48##X62515|HSPG2|3339|heparan sulfate proteoglycan 2##NM_005529|HSPG2|3339|heparan sulfate proteoglycan 2##M85289|HSPG2|3339|heparan sulfate proteoglycan 2##NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B##M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A##M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B##BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A##D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A	0.039675	
chr15	66859461	66859610	reg1022804.p1	5.486	+	AB527178 AY358729 NM_207338	-1766	-	AK122787 TSC_hg19_v1_chr15_+_66797663 AK291048 BC090041 BC036900	-61877	+	AK023175 NM_017975 BX640701	-62093	+	TSC_hg19_v1_chr15_+_66874506 BC016970	14981	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	135139	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	136024	+	AY358729|LCTL|197021|lactase-like##NM_207338|LCTL|197021|lactase-like##AK122787|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AK291048|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC090041|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC036900|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AK023175|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##NM_017975|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BX640701|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6	0.999558	CTCF.p2:20:1.000
chr2	60666687	60666833	reg1023373.p1	5.486	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2198278	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-2392772	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-2393006	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	113762	-	AF080216 TSC_hg19_v1_chr2_-_60780784	114018	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	316724	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.031495	
chr5	36398354	36398523	reg1024918.p1	5.486	+	BC017951 AK058151 AK302947 TSC_hg19_v1_chr5_-_36302002 BC047660 NM_001161429 NM_145000	-96434	-	BC062567 NM_153013 AK304009	-156127	-	NM_001085411 TSC_hg19_v1_chr5_-_36241996	-156450	-	NM_001166696 NM_004172	208018	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	208290	+	NM_001166695 U03504 AB529121 AY954110 TSC_hg19_v1_chr5_+_36608562	210058	+	BC017951|RANBP3L|202151|RAN binding protein 3-like##AK058151|RANBP3L|202151|RAN binding protein 3-like##AK302947|RANBP3L|202151|RAN binding protein 3-like##BC047660|RANBP3L|202151|RAN binding protein 3-like##NM_001161429|RANBP3L|202151|RAN binding protein 3-like##NM_145000|RANBP3L|202151|RAN binding protein 3-like##BC062567|NADKD1|133686|NAD kinase domain containing 1##NM_153013|NADKD1|133686|NAD kinase domain containing 1##AK304009|NADKD1|133686|NAD kinase domain containing 1##NM_001085411|NADKD1|133686|NAD kinase domain containing 1##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	0.527705	CTCF.p2:26:0.528
chr5	59964657	59964796	reg1024935.p2	5.486	+	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	-180686	+	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	-180822	-	NM_001104631	-775106	-	TSC_hg19_v1_chr5_-_59995928 AF490257	31190	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	31239	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	175345	-	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF490257|DEPDC1B|55789|DEP domain containing 1B##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7	0.908535	CTCF.p2:-7:0.909
chr7	15760632	15760736	reg1022703.p1	5.486	+	TSC_hg19_v1_chr7_-_15726309 AK309472 X82629 NM_005924	-34393	-	AB463880 CR536553 CU677801 L36328 TSC_hg19_v1_chr7_-_15726203 BC017021 AK313386	-34555	-	BC108676 AK131284 NM_001004320	-159078	-	NM_001101417 NM_001101426	700262	-	AB059270 CU678977 AB590718 AK315682 BC008484 AF361494 NM_015464	744698	-	NM_001195280	805820	+	AK309472|MEOX2|4223|mesenchyme homeobox 2##X82629|MEOX2|4223|mesenchyme homeobox 2##NM_005924|MEOX2|4223|mesenchyme homeobox 2##CR536553|MEOX2|4223|mesenchyme homeobox 2##L36328|MEOX2|4223|mesenchyme homeobox 2##BC017021|MEOX2|4223|mesenchyme homeobox 2##AK313386|MEOX2|4223|mesenchyme homeobox 2##BC108676|AGMO|392636|alkylglycerol monooxygenase##AK131284|AGMO|392636|alkylglycerol monooxygenase##NM_001004320|AGMO|392636|alkylglycerol monooxygenase##NM_001101417|ISPD|729920|isoprenoid synthase domain containing##NM_001101426|ISPD|729920|isoprenoid synthase domain containing##AB059270|SOSTDC1|25928|sclerostin domain containing 1##AK315682|SOSTDC1|25928|sclerostin domain containing 1##BC008484|SOSTDC1|25928|sclerostin domain containing 1##AF361494|SOSTDC1|25928|sclerostin domain containing 1##NM_015464|SOSTDC1|25928|sclerostin domain containing 1##NM_001195280|LRRC72|100506049|leucine rich repeat containing 72	0.257858	CTCF.p2:25:0.258
chr11	308350	308518	reg1017454.p2	5.485	+	NM_006435 TSC_hg19_v1_chr11_+_308199 BC009696 DQ891667 DQ894615 BT009859 CR456894 CR541874 X02490	-264	+	BC150562 BC150563 NM_001025295	-8913	-	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	-19292	+	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	5577	+	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	12410	-	TSC_hg19_v1_chr11_-_320925 X57352	12553	-	NM_006435|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC009696|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ891667|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ894615|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BT009859|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR456894|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR541874|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##X02490|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3##X57352|IFITM3|10410|interferon induced transmembrane protein 3	0.0	
chr18	712734	712834	reg1023411.p3	5.485	+	TSC_hg19_v1_chr18_-_712601 NM_202758 X67098 X89602 AK127818 BX648215 AK295850 AK292780 AK309035 BC001285 NM_001126123 NM_017512	-202	-	AB464497 AK289986 BC028301 NM_001012716	-54492	-	BC002567 TSC_hg19_v1_chr18_+_657708 BC018858 AK292620 AB590362 DQ892149 AB077207 AB077208 BT006811	-55073	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	99519	-	AK313050 NM_001099733	192159	+	NM_001117 BC093837 BC101803 S83513	192557	+	NM_202758|ENOSF1|55556|enolase superfamily member 1##X67098|ENOSF1|55556|enolase superfamily member 1##X89602|ENOSF1|55556|enolase superfamily member 1##AK127818|ENOSF1|55556|enolase superfamily member 1##BX648215|ENOSF1|55556|enolase superfamily member 1##AK295850|ENOSF1|55556|enolase superfamily member 1##AK292780|ENOSF1|55556|enolase superfamily member 1##AK309035|ENOSF1|55556|enolase superfamily member 1##BC001285|ENOSF1|55556|enolase superfamily member 1##NM_001126123|ENOSF1|55556|enolase superfamily member 1##NM_017512|ENOSF1|55556|enolase superfamily member 1##AK289986|C18orf56|494514|chromosome 18 open reading frame 56##BC028301|C18orf56|494514|chromosome 18 open reading frame 56##NM_001012716|C18orf56|494514|chromosome 18 open reading frame 56##BC002567|TYMS|7298|thymidylate synthetase##BC018858|TYMS|7298|thymidylate synthetase##AK292620|TYMS|7298|thymidylate synthetase##DQ892149|TYMS|7298|thymidylate synthetase##AB077207|TYMS|7298|thymidylate synthetase##AB077208|TYMS|7298|thymidylate synthetase##BT006811|TYMS|7298|thymidylate synthetase##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)	0.0	
chr1	92951494	92951597	reg1021911.p1	5.485	+	TSC_hg19_v1_chr1_-_92949508 AK123009	-2013	-	AK313876 NM_001127215 TSC_hg19_v1_chr1_-_92949370	-2166	-	AB463058 DQ891273 DQ894461 AB209606 BC074866 BC074867 TSC_hg19_v1_chr1_-_92949213	-2416	-	BC032751 TSC_hg19_v1_chr1_-_92951630 NM_001127216	70	-	U67369 NM_005263 TSC_hg19_v1_chr1_-_92952458	905	-	AB449875 AB587441 AF008915 AF042345 NM_005665	306410	-	AK123009|GFI1|2672|growth factor independent 1 transcription repressor##AK313876|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127215|GFI1|2672|growth factor independent 1 transcription repressor##DQ891273|GFI1|2672|growth factor independent 1 transcription repressor##DQ894461|GFI1|2672|growth factor independent 1 transcription repressor##AB209606|GFI1|2672|growth factor independent 1 transcription repressor##BC074866|GFI1|2672|growth factor independent 1 transcription repressor##BC074867|GFI1|2672|growth factor independent 1 transcription repressor##BC032751|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127216|GFI1|2672|growth factor independent 1 transcription repressor##U67369|GFI1|2672|growth factor independent 1 transcription repressor##NM_005263|GFI1|2672|growth factor independent 1 transcription repressor##AB449875|EVI5|7813|ecotropic viral integration site 5##AF008915|EVI5|7813|ecotropic viral integration site 5##NM_005665|EVI5|7813|ecotropic viral integration site 5	0.049516	
chr6	40276386	40276533	reg1000233.p1	5.485	+	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-374245	-	AB527188 AJ224328 NM_005943	-381074	-	NM_015345 AL833083 BC128388	-515641	+	BC142616 AB033072 NM_020737 AK291474	278685	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	730490	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	733887	+	AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2	0.0	
chr8	145304223	145304347	reg1026501.p1	5.485	+	AK295740 NM_001099280 NM_001099281 NM_032450 AK093563 AX748203 BC057824 BC067855 BC092486	-101357	+	BC003035 BC009915 NM_016458 AK098226 BC015471	-111590	+	TSC_hg19_v1_chr8_+_145159398 BC031273 BC018714 BC014082 AL136937	-144872	+	AX721087 NM_001008271 NM_001080514	17204	+	BC003035 BC009915 NM_016458 AK098226 BC015471	133618	+	AX721087 NM_001008271 NM_001080514	186290	+	AK295740|HEATR7A|727957|HEAT repeat containing 7A##NM_001099280|HEATR7A|727957|HEAT repeat containing 7A##NM_001099281|HEATR7A|727957|HEAT repeat containing 7A##NM_032450|HEATR7A|727957|HEAT repeat containing 7A##AK093563|HEATR7A|727957|HEAT repeat containing 7A##BC057824|HEATR7A|727957|HEAT repeat containing 7A##BC067855|HEATR7A|727957|HEAT repeat containing 7A##BC092486|HEATR7A|727957|HEAT repeat containing 7A##BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##BC031273|MAF1|84232|MAF1 homolog (S. cerevisiae)##BC018714|MAF1|84232|MAF1 homolog (S. cerevisiae)##BC014082|MAF1|84232|MAF1 homolog (S. cerevisiae)##AL136937|MAF1|84232|MAF1 homolog (S. cerevisiae)##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)	0.377071	CTCF.p2:95:0.351
chr8	22862196	22862307	reg1024485.p1	5.485	+	TSC_hg19_v1_chr8_+_22857415 AK292863 AY009093	-4814	+	AK314366 AK098744 TSC_hg19_v1_chr8_+_22857390	-4879	+	TSC_hg19_v1_chr8_+_22857067 AB018260 NM_015178	-5174	+	AB451272 AB451399 AF012628 AF018657 AF018658 AF020501 AF022386 CR541898 AB385139 TSC_hg19_v1_chr8_-_22926429	64168	-	TSC_hg19_v1_chr8_-_22926545 AF192548 AF016266 AF016268 AF153687 AK291216 AF012535 AF016849 AY358277 BX538104 AK298602 BC001281 NM_003842 NM_147187	64343	-	NM_003841 AK298664 BC017852 TSC_hg19_v1_chr8_+_22960433 AK313213 AK298718 AF012536 AY358281 AF016267 AF033854 AF014794 BC125041 BC125042 AF020502 AF012629 CR541857	98229	+	AK292863|RHOBTB2|23221|Rho-related BTB domain containing 2##AY009093|RHOBTB2|23221|Rho-related BTB domain containing 2##AK314366|RHOBTB2|23221|Rho-related BTB domain containing 2##AK098744|RHOBTB2|23221|Rho-related BTB domain containing 2##AB018260|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_015178|RHOBTB2|23221|Rho-related BTB domain containing 2##AB451272|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AB451399|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012628|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018657|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018658|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF020501|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF022386|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##CR541898|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF192548|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016266|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016268|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF153687|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK291216|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012535|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016849|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AY358277|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BX538104|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK298602|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BC001281|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003842|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_147187|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003841|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298664|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC017852|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK313213|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298718|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012536|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AY358281|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF016267|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF033854|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF014794|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125041|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125042|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF020502|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012629|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##CR541857|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain	0.034865	
chr10	2179842	2179971	reg1029195.p1	5.484	+	AF034837 NM_018702	-400237	-	TSC_hg19_v1_chr10_+_1102822 AK292591	-1077080	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-1077137	+	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	929841	+	AK092597 AX747622 NM_001242339	930912	+	BC021698 TSC_hg19_v1_chr10_+_3151628	971706	+	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet##BC021698|PFKP|5214|phosphofructokinase, platelet	0.043533	
chr11	108007130	108007250	reg1025996.p2	5.484	+	TSC_hg19_v1_chr11_+_107992293 D90228 NM_000019 AK312574 BC010942 BC063853 AB590491	-14899	+	X81882 BC017838 TSC_hg19_v1_chr11_+_107880062 CU687672 AF017061 AF327710	-127161	+	TSC_hg19_v1_chr11_+_107879644 AK292575 BC063306	-127563	+	U58852 AB527441 TSC_hg19_v1_chr11_-_108093291 BC136270 AK291687 X97186	86093	-	D83243 BC050561 TSC_hg19_v1_chr11_-_108093366 BC040356 BC094769 AK290020 NM_002519	86182	-	NM_000051	86368	+	D90228|ACAT1|38|acetyl-CoA acetyltransferase 1##NM_000019|ACAT1|38|acetyl-CoA acetyltransferase 1##AK312574|ACAT1|38|acetyl-CoA acetyltransferase 1##BC010942|ACAT1|38|acetyl-CoA acetyltransferase 1##BC063853|ACAT1|38|acetyl-CoA acetyltransferase 1##X81882|CUL5|8065|cullin 5##BC017838|CUL5|8065|cullin 5##AF017061|CUL5|8065|cullin 5##AF327710|CUL5|8065|cullin 5##AK292575|CUL5|8065|cullin 5##BC063306|CUL5|8065|cullin 5##U58852|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC136270|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AK291687|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##X97186|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##D83243|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC050561|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC040356|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC094769|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AK290020|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##NM_002519|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##NM_000051|ATM|472|ataxia telangiectasia mutated	0.72323	CTCF.p2:-20:0.723
chr13	102127159	102127256	reg1026721.p1	5.484	+	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	-22212	+	TSC_hg19_v1_chr13_-_102068838 BC028390	-58367	-	AY141972 AK094669 BC012128 NM_052867 TSC_hg19_v1_chr13_-_102068817	-58446	-	NM_004115 U66200	441787	-	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	926868	-	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	1122129	+	AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC028390|NALCN|259232|sodium leak channel, non-selective##AY141972|NALCN|259232|sodium leak channel, non-selective##AK094669|NALCN|259232|sodium leak channel, non-selective##BC012128|NALCN|259232|sodium leak channel, non-selective##NM_052867|NALCN|259232|sodium leak channel, non-selective##NM_004115|FGF14|2259|fibroblast growth factor 14##U66200|FGF14|2259|fibroblast growth factor 14##BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II	0.017344	
chr22	39679061	39679173	reg1027226.p1	5.484	+	NM_002608 X02811 TSC_hg19_v1_chr22_-_39640988 M12783	-38110	-	CR541807 CU013138 CU013426 AB590092 TSC_hg19_v1_chr22_-_39639984 CR456538 X02744	-39092	-	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	-42208	-	BC014017 BC013674 BC013861 BC015032 BC015767 BC088373 BC063662 BC071666 CR456566 BC006483 BC012146 BC012786 TSC_hg19_v1_chr22_-_39715629 AK092695 AK297711 AK315693 AX747675 BC008492 BC107711 D28415 NM_000967 NM_001033853	36522	-	TSC_hg19_v1_chr22_+_39745981 NM_004711 NM_145731 BC000731 AK295863 CR456590 AK289507 AB209372 CU013190 CU013478 AB587338 AJ002304 AJ002305 BT007135 CU674372	66788	+	AJ002303 NM_145738	81057	+	NM_002608|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02811|PDGFB|5155|platelet-derived growth factor beta polypeptide##M12783|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR541807|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013138|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013426|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR456538|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02744|PDGFB|5155|platelet-derived growth factor beta polypeptide##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide##BC014017|RPL3|6122|ribosomal protein L3##BC013674|RPL3|6122|ribosomal protein L3##BC013861|RPL3|6122|ribosomal protein L3##BC015032|RPL3|6122|ribosomal protein L3##BC015767|RPL3|6122|ribosomal protein L3##BC088373|RPL3|6122|ribosomal protein L3##BC063662|RPL3|6122|ribosomal protein L3##BC071666|RPL3|6122|ribosomal protein L3##CR456566|RPL3|6122|ribosomal protein L3##BC006483|RPL3|6122|ribosomal protein L3##BC012146|RPL3|6122|ribosomal protein L3##BC012786|RPL3|6122|ribosomal protein L3##AK092695|RPL3|6122|ribosomal protein L3##AK297711|RPL3|6122|ribosomal protein L3##AK315693|RPL3|6122|ribosomal protein L3##BC008492|RPL3|6122|ribosomal protein L3##BC107711|RPL3|6122|ribosomal protein L3##NM_000967|RPL3|6122|ribosomal protein L3##NM_001033853|RPL3|6122|ribosomal protein L3##NM_004711|SYNGR1|9145|synaptogyrin 1##NM_145731|SYNGR1|9145|synaptogyrin 1##BC000731|SYNGR1|9145|synaptogyrin 1##AK295863|SYNGR1|9145|synaptogyrin 1##CR456590|SYNGR1|9145|synaptogyrin 1##AK289507|SYNGR1|9145|synaptogyrin 1##CU013190|SYNGR1|9145|synaptogyrin 1##CU013478|SYNGR1|9145|synaptogyrin 1##AJ002304|SYNGR1|9145|synaptogyrin 1##AJ002305|SYNGR1|9145|synaptogyrin 1##BT007135|SYNGR1|9145|synaptogyrin 1##AJ002303|SYNGR1|9145|synaptogyrin 1##NM_145738|SYNGR1|9145|synaptogyrin 1	0.010351	
chr7	12678639	12678746	reg1024914.p2	5.484	+	AK027778 NM_033128	-49545	+	AB067492 NM_001112706 AK290363 AK075123 TSC_hg19_v1_chr7_+_12610346 BC021090 AB590413 DQ892033 DQ895224 AF276507	-68385	+	NM_001135924	-234841	-	TSC_hg19_v1_chr7_+_12726499 NM_001037164 NM_212460 BC039123 BC001111 BC003027	47794	+	NM_001195396 NM_005738	48218	+	TSC_hg19_v1_chr7_+_12727257 AK313233 U73960	48554	+	AK027778|SCIN|85477|scinderin##NM_033128|SCIN|85477|scinderin##AB067492|SCIN|85477|scinderin##NM_001112706|SCIN|85477|scinderin##AK290363|SCIN|85477|scinderin##AK075123|SCIN|85477|scinderin##BC021090|SCIN|85477|scinderin##DQ892033|SCIN|85477|scinderin##DQ895224|SCIN|85477|scinderin##AF276507|SCIN|85477|scinderin##NM_001135924|VWDE|221806|von Willebrand factor D and EGF domains##NM_001037164|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_212460|ARL4A|10124|ADP-ribosylation factor-like 4A##BC039123|ARL4A|10124|ADP-ribosylation factor-like 4A##BC001111|ARL4A|10124|ADP-ribosylation factor-like 4A##BC003027|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_001195396|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_005738|ARL4A|10124|ADP-ribosylation factor-like 4A##AK313233|ARL4A|10124|ADP-ribosylation factor-like 4A##U73960|ARL4A|10124|ADP-ribosylation factor-like 4A	0.989806	CTCF.p2:-19:0.990
chr7	87135715	87135848	reg1025975.p1	5.484	+	M23234 NM_000443 NM_018849 NM_018850 BC042531	-30767	-	TSC_hg19_v1_chr7_+_86975006 NM_001143935 NM_001243745 NM_021151 AK127901 AK313487 BC051874 BC039004 BC012483 BC019226 AF073770 AF168793	-160787	+	BT009845 CR542141 BC061927 TSC_hg19_v1_chr7_-_86974833 BC103631 AB007457 AB007458 BC002709 AK292782 AB007455 AB007456 BC068535	-161009	-	TSC_hg19_v1_chr7_-_87230197 AF016535 BC130424	94498	-	TSC_hg19_v1_chr7_+_87257708 AK055233 NM_001134405 NM_001134406 NM_138290 BC022520 AK293607 AK294039	122036	+	AF345623 AF345624 AY425005 AY425006 M14758 AF345625 AK290159 NM_000927 AY425007 AY452673	206866	-	M23234|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_000443|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018849|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018850|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##BC042531|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_001143935|CROT|54677|carnitine O-octanoyltransferase##NM_001243745|CROT|54677|carnitine O-octanoyltransferase##NM_021151|CROT|54677|carnitine O-octanoyltransferase##AK127901|CROT|54677|carnitine O-octanoyltransferase##AK313487|CROT|54677|carnitine O-octanoyltransferase##BC051874|CROT|54677|carnitine O-octanoyltransferase##BC039004|CROT|54677|carnitine O-octanoyltransferase##BC012483|CROT|54677|carnitine O-octanoyltransferase##BC019226|CROT|54677|carnitine O-octanoyltransferase##AF073770|CROT|54677|carnitine O-octanoyltransferase##AF168793|CROT|54677|carnitine O-octanoyltransferase##BT009845|TP53TG1|11257|TP53 target 1 (non-protein coding)##CR542141|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC061927|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC103631|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007457|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007458|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC002709|TP53TG1|11257|TP53 target 1 (non-protein coding)##AK292782|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007455|TP53TG1|11257|TP53 target 1 (non-protein coding)##AB007456|TP53TG1|11257|TP53 target 1 (non-protein coding)##BC068535|TP53TG1|11257|TP53 target 1 (non-protein coding)##AF016535|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##BC130424|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK055233|RUNDC3B|154661|RUN domain containing 3B##NM_001134405|RUNDC3B|154661|RUN domain containing 3B##NM_001134406|RUNDC3B|154661|RUN domain containing 3B##NM_138290|RUNDC3B|154661|RUN domain containing 3B##BC022520|RUNDC3B|154661|RUN domain containing 3B##AK293607|RUNDC3B|154661|RUN domain containing 3B##AK294039|RUNDC3B|154661|RUN domain containing 3B##AY425005|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AY425006|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##M14758|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AF345625|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK290159|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##NM_000927|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AY425007|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1	0.796155	CTCF.p2:-29:0.796
chr11	106908410	106908509	reg1027166.p1	5.483	+	BC085622 TSC_hg19_v1_chr11_-_106889260 BC130484 BC130488 BC144033 NM_000855 X63282 Z50053	-19371	-	NM_152433 NM_198439	-959995	-	AF136978 AF151057 AF151838 AF302110 NM_015423 TSC_hg19_v1_chr11_+_105948388 BC016728 AK312529 BC015470 AK293362 AB463408 CU677695 DQ891342 DQ894524	-960094	+	AK293001 TSC_hg19_v1_chr11_-_107328552 BX649022 BX647832 BC107418 BC070142 BX648704 AK126881 NM_152434	420080	-	AK293603 TSC_hg19_v1_chr11_-_107436464 BC015183 AK304413 AB218768 AK095523 NM_138775	527985	-	TSC_hg19_v1_chr11_+_107461813 AK297351 NM_001130037 NM_018712	553352	+	BC130484|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC130488|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC144033|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_000855|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##X63282|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##Z50053|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_152433|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##NM_198439|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##AF136978|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151057|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151838|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF302110|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##NM_015423|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC016728|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK312529|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC015470|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK293362|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ891342|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ894524|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK293001|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX649022|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX647832|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC107418|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC070142|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX648704|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK126881|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##NM_152434|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK293603|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##BC015183|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK304413|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AB218768|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK095523|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##NM_138775|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1	0.833853	CTCF.p2:2:0.834
chr3	141632158	141632311	reg1025859.p2	5.483	+	TSC_hg19_v1_chr3_+_141595539 U51478 CU680074	-36657	+	TSC_hg19_v1_chr3_+_141595484 NM_001679 AK131061 AK293697 BC001469 BC011835	-36797	+	DQ426875 AF439409 AF282269 NM_139209 AB527155	-135198	+	AL080206 NM_001178140	86974	-	BC002405 AK303634 U18422 BC007976 AK303181 TSC_hg19_v1_chr3_-_141747469 NM_001178141 NM_001178142 NM_006286	115236	-	TSC_hg19_v1_chr3_-_141868338 AK314786 BC013993 U35117 NM_001178138 NM_001178139	236090	-	U51478|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##NM_001679|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK131061|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK293697|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##BC001469|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##BC011835|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AF439409|GRK7|131890|G protein-coupled receptor kinase 7##AF282269|GRK7|131890|G protein-coupled receptor kinase 7##NM_139209|GRK7|131890|G protein-coupled receptor kinase 7##AL080206|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178140|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK314786|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC013993|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U35117|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178138|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178139|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)	0.933486	CTCF.p2:14:0.933
chr5	169701513	169701615	reg1022198.p1	5.483	+	BC030767 NM_001102609 BC092511	-41568	+	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	-168593	+	AK055998 NM_001129891	-293821	-	BT007273 FN432830 DQ890681 DQ893863 AB527802 TSC_hg19_v1_chr5_-_169724688	23087	-	TSC_hg19_v1_chr5_-_169724734 BC016618 AK310369	23191	-	AK292890 TSC_hg19_v1_chr5_-_169724784 AK300000	23234	-	BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##BT007273|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##FN432830|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ890681|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ893863|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK292890|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK300000|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	0.034476	
chr8	105430291	105430380	reg1007439.p1	5.483	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	-78283	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	-598760	+	AK126939 NM_001100117	-917360	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	48880	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	170840	-	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	170912	-	AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12	0.0	
chr14	50505337	50505517	reg1020738.p2	5.482	+	AK091232 AX746864 NM_001012706	-31190	-	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-145021	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-145594	+	AF390030 NM_001014830	53933	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	77843	-	TSC_hg19_v1_chr14_-_50697940 L13858 HQ258542 AB463275 BC117261 BC143366 BC143367	192556	-	AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D##L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)##HQ258542|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)	0.0	
chr16	56823468	56823576	reg1027041.p1	5.482	+	AK294176 NM_001242796	-6133	+	NM_001242795 AK056637 TSC_hg19_v1_chr16_+_56815740	-7787	+	TSC_hg19_v1_chr16_+_56764089 D42085 AF086282 BC034346 AK292262	-59437	+	AK315298 NM_000339 NM_001126107 NM_001126108 AK223133 X91220 U44128 AB463268	75610	+	NM_001010989 NM_001010990 NM_014685	142225	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	142619	+	AK294176|NUP93|9688|nucleoporin 93kDa##NM_001242796|NUP93|9688|nucleoporin 93kDa##NM_001242795|NUP93|9688|nucleoporin 93kDa##AK056637|NUP93|9688|nucleoporin 93kDa##D42085|NUP93|9688|nucleoporin 93kDa##AF086282|NUP93|9688|nucleoporin 93kDa##BC034346|NUP93|9688|nucleoporin 93kDa##AK292262|NUP93|9688|nucleoporin 93kDa##AK315298|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_000339|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126107|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126108|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK223133|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##X91220|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##U44128|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	0.977401	CTCF.p2:7:0.977
chr20	48247067	48247247	reg1022244.p1	5.482	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	-62468	-	BC110572 BC110573 NM_004975	-147978	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-351962	+	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	83073	-	AB004550 TSC_hg19_v1_chr20_-_48330359	83199	-	TSC_hg19_v1_chr20_-_48330471 NM_004776	83309	-	AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.0	
chr3	57994221	57994401	reg1006712.p2	5.482	+	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	-164	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-251109	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-315572	-	NM_004944	206086	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	228972	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	229219	+	AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6	0.0	
chr6_cox_hap2	1222149	1222249	reg1025358.p1	5.482	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.95313	CTCF.p2:-14:0.953
chr19	17716976	17717092	reg1027039.p1	5.481	+	TSC_hg19_v1_chr19_+_17666507 AK075541 NM_024656	-50523	+	TSC_hg19_v1_chr19_+_17666457 BC108308	-50571	+	TSC_hg19_v1_chr19_+_17666429 AK074941	-50626	+	AB028955 NM_001080421 AB587313 TSC_hg19_v1_chr19_-_17799158	82064	-	TSC_hg19_v1_chr19_+_17830288 AK292555	113256	+	DQ387861 NM_018174 AL834233 BC067115 TSC_hg19_v1_chr19_+_17830310 BC080547 AJ440784 AK027623 BC113952 AK308975	113275	+	AK075541|GLT25D1|79709|glycosyltransferase 25 domain containing 1##NM_024656|GLT25D1|79709|glycosyltransferase 25 domain containing 1##BC108308|GLT25D1|79709|glycosyltransferase 25 domain containing 1##AK074941|GLT25D1|79709|glycosyltransferase 25 domain containing 1##AB028955|UNC13A|23025|unc-13 homolog A (C. elegans)##NM_001080421|UNC13A|23025|unc-13 homolog A (C. elegans)##AK292555|MAP1S|55201|microtubule-associated protein 1S##DQ387861|MAP1S|55201|microtubule-associated protein 1S##NM_018174|MAP1S|55201|microtubule-associated protein 1S##AL834233|MAP1S|55201|microtubule-associated protein 1S##BC067115|MAP1S|55201|microtubule-associated protein 1S##BC080547|MAP1S|55201|microtubule-associated protein 1S##AJ440784|MAP1S|55201|microtubule-associated protein 1S##AK027623|MAP1S|55201|microtubule-associated protein 1S##BC113952|MAP1S|55201|microtubule-associated protein 1S##AK308975|MAP1S|55201|microtubule-associated protein 1S	0.880151	CTCF.p2:-8:0.880
chr2	171943433	171943568	reg1029353.p1	5.481	+	AK301857 NM_001136555	-20018	-	TSC_hg19_v1_chr2_+_171785781 AK298020 BC007770 BC001408 AK296698 AK027349 AB528359 DQ892715 DQ895965 CU675801	-157686	+	TSC_hg19_v1_chr2_+_171785776 AK315508 AK023201 AK225810 AK293640 AK023082	-157799	+	TSC_hg19_v1_chr2_-_172017240 DQ890904 DQ894057 BC032657 D50927 AK292508 AF162666 AB004885	73596	-	TSC_hg19_v1_chr2_-_172017431 AK091975 NM_012290	73999	-	AK090779 NM_001136554	144323	-	AK301857|TLK1|9874|tousled-like kinase 1##NM_001136555|TLK1|9874|tousled-like kinase 1##AK298020|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC007770|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC001408|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK296698|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK027349|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ892715|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ895965|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK315508|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023201|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK225810|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK293640|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023082|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ890904|TLK1|9874|tousled-like kinase 1##DQ894057|TLK1|9874|tousled-like kinase 1##BC032657|TLK1|9874|tousled-like kinase 1##D50927|TLK1|9874|tousled-like kinase 1##AK292508|TLK1|9874|tousled-like kinase 1##AF162666|TLK1|9874|tousled-like kinase 1##AB004885|TLK1|9874|tousled-like kinase 1##AK091975|TLK1|9874|tousled-like kinase 1##NM_012290|TLK1|9874|tousled-like kinase 1##AK090779|TLK1|9874|tousled-like kinase 1##NM_001136554|TLK1|9874|tousled-like kinase 1	0.990075	CTCF.p2:14:0.990
chrX	130396848	130396980	reg1023932.p1	5.481	+	AK128203 NM_144967 AK296748 AX721074	-204642	+	TSC_hg19_v1_chrX_-_130037207 AK000353 NM_006375 NM_182314	-359708	-	TSC_hg19_v1_chrX_-_130037184 BC108713 AL133207 AK289812 AK289837	-359737	-	BC028312 NM_001170963	26120	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	26348	-	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	26498	-	AK128203|ARHGAP36|158763|Rho GTPase activating protein 36##NM_144967|ARHGAP36|158763|Rho GTPase activating protein 36##AK296748|ARHGAP36|158763|Rho GTPase activating protein 36##AK000353|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_006375|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_182314|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##BC108713|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AL133207|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289812|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289837|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##BC028312|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1	0.161754	
chr2	146242129	146242251	reg1024049.p2	5.480	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-964269	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-964559	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-966987	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	2359927	+	TSC_hg19_v1_chr2_+_148602300 AK314124	2360145	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	2360455	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.247295	
chr5	110559907	110560035	reg1025719.p1	5.480	+	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	-22	+	AF385437 NM_139281 BC133025 BC136517 AK095312 TSC_hg19_v1_chr5_+_110428045 AL832494	-132012	+	AY037115 NM_033035	-152582	+	AK054566 NM_139164 TSC_hg19_v1_chr5_-_110848234 AK290312 AK310848 BC019632 AK125317 AK308851 AK315863 AK315869	288231	-	BC042956 TSC_hg19_v1_chr5_-_110848300	288323	-	NM_001142483	531976	-	L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AF385437|WDR36|134430|WD repeat domain 36##NM_139281|WDR36|134430|WD repeat domain 36##BC133025|WDR36|134430|WD repeat domain 36##BC136517|WDR36|134430|WD repeat domain 36##AK095312|WDR36|134430|WD repeat domain 36##AL832494|WDR36|134430|WD repeat domain 36##AY037115|TSLP|85480|thymic stromal lymphopoietin##NM_033035|TSLP|85480|thymic stromal lymphopoietin##AK054566|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_139164|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK290312|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK310848|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC019632|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK125317|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK308851|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315863|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315869|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC042956|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13	0.121357	
chr11	63535786	63535899	reg1029408.p1	5.479	+	TSC_hg19_v1_chr11_+_63448971 NM_006054 NM_201428 NM_201429 NM_201430 AY427821 AY750848 AK309766 AK075412 AK297533 AK304100 AK307811 BC011394 AK295534 AK308083 BC022993 AB209771 AF059524 AK222898 AF119297 BC100822 BC100823 BC118550 BC118628 AK295758 BC010556 BC105982 BC000634 AK295361 BC105981 AK297529 AB591013 CU679745 AK127079	-86796	+	TSC_hg19_v1_chr11_-_63439066 NM_015459 CR936784 BC077727	-96772	-	TSC_hg19_v1_chr11_-_63438892 AK023383 CU687312 AL117600 BC005096	-96989	-	NM_001144936 TSC_hg19_v1_chr11_-_63536248	354	-	BC056402 NM_138471 TSC_hg19_v1_chr11_+_63580927	45103	+	TSC_hg19_v1_chr11_+_63581031 BC002782 BC007540 CU691150	45252	+	NM_006054|RTN3|10313|reticulon 3##NM_201428|RTN3|10313|reticulon 3##NM_201429|RTN3|10313|reticulon 3##NM_201430|RTN3|10313|reticulon 3##AY427821|RTN3|10313|reticulon 3##AY750848|RTN3|10313|reticulon 3##AK309766|RTN3|10313|reticulon 3##AK075412|RTN3|10313|reticulon 3##AK297533|RTN3|10313|reticulon 3##AK304100|RTN3|10313|reticulon 3##AK307811|RTN3|10313|reticulon 3##BC011394|RTN3|10313|reticulon 3##AK295534|RTN3|10313|reticulon 3##AK308083|RTN3|10313|reticulon 3##BC022993|RTN3|10313|reticulon 3##AB209771|RTN3|10313|reticulon 3##AF059524|RTN3|10313|reticulon 3##AK222898|RTN3|10313|reticulon 3##AF119297|RTN3|10313|reticulon 3##BC100822|RTN3|10313|reticulon 3##BC100823|RTN3|10313|reticulon 3##BC118550|RTN3|10313|reticulon 3##BC118628|RTN3|10313|reticulon 3##AK295758|RTN3|10313|reticulon 3##BC010556|RTN3|10313|reticulon 3##BC105982|RTN3|10313|reticulon 3##BC000634|RTN3|10313|reticulon 3##AK295361|RTN3|10313|reticulon 3##BC105981|RTN3|10313|reticulon 3##AK297529|RTN3|10313|reticulon 3##AK127079|RTN3|10313|reticulon 3##NM_015459|ATL3|25923|atlastin GTPase 3##CR936784|ATL3|25923|atlastin GTPase 3##BC077727|ATL3|25923|atlastin GTPase 3##AK023383|ATL3|25923|atlastin GTPase 3##AL117600|ATL3|25923|atlastin GTPase 3##NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95##BC056402|C11orf84|144097|chromosome 11 open reading frame 84##NM_138471|C11orf84|144097|chromosome 11 open reading frame 84##BC002782|C11orf84|144097|chromosome 11 open reading frame 84##BC007540|C11orf84|144097|chromosome 11 open reading frame 84	0.998792	CTCF.p2:-12:0.999
chr14	23287323	23287408	reg1009164.p1	5.479	+	AB020532 BX161519 NM_001126105	-2307	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	-2733	-	TSC_hg19_v1_chr14_-_23284568 AK025377	-2786	-	Y18474 BX248291 AF092032 AJ130718 NM_001126106	1600	-	TSC_hg19_v1_chr14_+_23299095 AK096946 NM_178336 NM_180982 NM_181304 NM_181305 NM_181306 NM_181307	11726	+	TSC_hg19_v1_chr14_+_23299104 AK292011 AK000450 BX248749 BC055381 BC068070	11745	+	AB020532|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX161519|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126105|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK025377|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK096946|MRPL52|122704|mitochondrial ribosomal protein L52##NM_178336|MRPL52|122704|mitochondrial ribosomal protein L52##NM_180982|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181304|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181305|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181306|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181307|MRPL52|122704|mitochondrial ribosomal protein L52##AK292011|MRPL52|122704|mitochondrial ribosomal protein L52##AK000450|MRPL52|122704|mitochondrial ribosomal protein L52##BX248749|MRPL52|122704|mitochondrial ribosomal protein L52##BC055381|MRPL52|122704|mitochondrial ribosomal protein L52##BC068070|MRPL52|122704|mitochondrial ribosomal protein L52	0.0	
chr5	142268089	142268180	reg1008231.p1	5.479	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-117826	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-118162	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-190563	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	514689	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	514972	-	BC015610 TSC_hg19_v1_chr5_-_142783214	515077	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr7	28519202	28519383	reg1022997.p1	5.479	+	L05911 NM_004904	-44059	+	L05515 NM_182898	-67149	+	TSC_hg19_v1_chr7_+_28448986 BC087859	-70304	+	AK292916 TSC_hg19_v1_chr7_+_28530784	11473	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	206391	+	CU690330 TSC_hg19_v1_chr7_-_28997732	478405	-	L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##L05515|CREB5|9586|cAMP responsive element binding protein 5##NM_182898|CREB5|9586|cAMP responsive element binding protein 5##BC087859|LOC401317|401317|uncharacterized LOC401317##AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5	0.0	
chr3	42872006	42872090	reg1013838.p1	5.478	+	BC011588 BC018716 BC020558 NM_001296 AK313561 BC008816 BC011631	-21079	+	TSC_hg19_v1_chr3_+_42846151 BC033952	-25888	+	TSC_hg19_v1_chr3_-_42845983 AK225461 BC009583 BC009594 BC000601 AF145385 AF077034 BC070277 AK225571 AK311815 AL110233 NM_001099669 NM_014056	-26062	-	AF090318 TSC_hg19_v1_chr3_-_42917348 BC067434 BC067441 BC067442 BC067443 BC067444 AK315330 AK310784	45282	-	NM_004391	45584	-	AK127779 NM_207404	75353	+	BC011588|CCBP2|1238|chemokine binding protein 2##BC018716|CCBP2|1238|chemokine binding protein 2##BC020558|CCBP2|1238|chemokine binding protein 2##NM_001296|CCBP2|1238|chemokine binding protein 2##AK313561|CCBP2|1238|chemokine binding protein 2##BC008816|CCBP2|1238|chemokine binding protein 2##BC011631|CCBP2|1238|chemokine binding protein 2##AK225461|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC009583|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC009594|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC000601|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AF145385|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AF077034|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##BC070277|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AK225571|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AK311815|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AL110233|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##NM_001099669|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##NM_014056|HIGD1A|25994|HIG1 hypoxia inducible domain family, member 1A##AF090318|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067434|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067441|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067442|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067443|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##BC067444|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##AK310784|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##NM_004391|CYP8B1|1582|cytochrome P450, family 8, subfamily B, polypeptide 1##AK127779|ZNF662|389114|zinc finger protein 662##NM_207404|ZNF662|389114|zinc finger protein 662	0.0	
chr1	77614011	77614162	reg1026636.p1	5.477	+	TSC_hg19_v1_chr1_+_77333164 AK095758 AK300902 AK295019 BC001201 NM_030965	-280915	+	TSC_hg19_v1_chr1_+_77333125 AK056241	-280959	+	TSC_hg19_v1_chr1_+_77165439 D28460	-448646	+	Y07596 CU676676 AF022913 BC020737 TSC_hg19_v1_chr1_-_77685112 BC026186 AK304340 AK313015 BX648473 NM_005482	71017	-	TSC_hg19_v1_chr1_+_77747603 AF445193 NM_174858	133545	+	TSC_hg19_v1_chr1_+_77747727 BC036666 AK090967 AX746708	133648	+	AK095758|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK300902|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK295019|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##BC001201|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##NM_030965|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK056241|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##D28460|TPI1|7167|triosephosphate isomerase 1##Y07596|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AF022913|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##BC020737|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##BC026186|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AK304340|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AK313015|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##BX648473|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##NM_005482|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AF445193|AK5|26289|adenylate kinase 5##NM_174858|AK5|26289|adenylate kinase 5##BC036666|AK5|26289|adenylate kinase 5##AK090967|AK5|26289|adenylate kinase 5	0.818024	CTCF.p2:-10:0.818
chr2	219330882	219331062	reg1027094.p2	5.477	+	TSC_hg19_v1_chr2_+_219283845 NM_007127 AK223398 AK300965 AK313709	-47132	+	TSC_hg19_v1_chr2_+_219264739 BC012977 AB463546 EU446878 CU680458 AY279529	-66191	+	AF229162 NM_021198 NM_182642 TSC_hg19_v1_chr2_+_219264577	-66432	+	TSC_hg19_v1_chr2_-_219433075 BC133007 BC133009 BC144249 BC144252 AK095577 AK128583 BX538024 BC050461 BC112901 AL832645 NM_020935	102081	-	AK293281 TSC_hg19_v1_chr2_+_219433334 AB500892	102394	+	TSC_hg19_v1_chr2_+_219433559 BC137455 BC137456 AK316567 BC007102 NM_005444	102625	+	NM_007127|VIL1|7429|villin 1##AK223398|VIL1|7429|villin 1##AK300965|VIL1|7429|villin 1##AK313709|VIL1|7429|villin 1##BC012977|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##EU446878|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##AY279529|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##AF229162|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##NM_021198|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##NM_182642|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##BC133007|USP37|57695|ubiquitin specific peptidase 37##BC133009|USP37|57695|ubiquitin specific peptidase 37##BC144249|USP37|57695|ubiquitin specific peptidase 37##BC144252|USP37|57695|ubiquitin specific peptidase 37##AK095577|USP37|57695|ubiquitin specific peptidase 37##AK128583|USP37|57695|ubiquitin specific peptidase 37##BX538024|USP37|57695|ubiquitin specific peptidase 37##BC050461|USP37|57695|ubiquitin specific peptidase 37##BC112901|USP37|57695|ubiquitin specific peptidase 37##AL832645|USP37|57695|ubiquitin specific peptidase 37##NM_020935|USP37|57695|ubiquitin specific peptidase 37##AK293281|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##AB500892|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##BC137455|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##BC137456|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##AK316567|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##BC007102|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##NM_005444|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	0.693438	CTCF.p2:0:0.693
chr4	110219941	110220038	reg1023058.p2	5.477	+	AK091888 AX747236 AK294072 AJ298293 AK294235 BC022526 NM_001146590 NM_001146627 NM_031279	-535846	-	AF068297 TSC_hg19_v1_chr4_+_109571786 AK312185 DQ893222 DQ896551 AF343342	-648194	+	TSC_hg19_v1_chr4_+_109571754 NM_021227 BC054857 BC016321 AF161425 AF201937	-648236	+	AF293340 AF293341 NM_032518 NM_198721 TSC_hg19_v1_chr4_-_110223816	3818	-	TSC_hg19_v1_chr4_+_110354836 AJ131245	134858	+	TSC_hg19_v1_chr4_-_110354918 BC009800	134954	-	AK091888|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294072|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AJ298293|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294235|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##BC022526|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146590|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146627|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_031279|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AF068297|OSTC|58505|oligosaccharyltransferase complex subunit##AK312185|OSTC|58505|oligosaccharyltransferase complex subunit##DQ893222|OSTC|58505|oligosaccharyltransferase complex subunit##DQ896551|OSTC|58505|oligosaccharyltransferase complex subunit##AF343342|OSTC|58505|oligosaccharyltransferase complex subunit##NM_021227|OSTC|58505|oligosaccharyltransferase complex subunit##BC054857|OSTC|58505|oligosaccharyltransferase complex subunit##BC016321|OSTC|58505|oligosaccharyltransferase complex subunit##AF161425|OSTC|58505|oligosaccharyltransferase complex subunit##AF201937|OSTC|58505|oligosaccharyltransferase complex subunit##AF293340|COL25A1|84570|collagen, type XXV, alpha 1##AF293341|COL25A1|84570|collagen, type XXV, alpha 1##NM_032518|COL25A1|84570|collagen, type XXV, alpha 1##NM_198721|COL25A1|84570|collagen, type XXV, alpha 1##AJ131245|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC009800|1/2-SBSRNA4|100533182|lncRNA_BC009800	0.0	
chr15	33526264	33526382	reg1027234.p1	5.476	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-166088	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-515157	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-516066	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	76846	+	TSC_hg19_v1_chr15_-_34212524 BC037796	686235	-	AK095198 NM_012125	734765	+	NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5	0.929701	CTCF.p2:-11:0.930
chr8	145060563	145060743	reg1019063.p2	5.476	+	AK027370 TSC_hg19_v1_chr8_-_145060609 AK309251 BC030549 BC020378 AK222914 AK308657 NM_032789	-39	-	AK303317 TSC_hg19_v1_chr8_-_145060590 AK128537 BC132961 BC136542 BC144235	-76	-	TSC_hg19_v1_chr8_-_145050917 U53204 NM_000445	-9726	-	BC035485 TSC_hg19_v1_chr8_-_145064214	3522	-	TSC_hg19_v1_chr8_+_145064223 NM_000837 NM_001009184	3545	+	TSC_hg19_v1_chr8_+_145064268 BC041788 AB097026 AK294127	3624	+	AK027370|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK309251|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC030549|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC020378|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK222914|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK308657|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##NM_032789|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK303317|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK128537|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC132961|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC136542|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC144235|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##U53204|PLEC|5339|plectin##NM_000445|PLEC|5339|plectin##BC035485|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##NM_000837|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)##NM_001009184|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)##BC041788|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)##AB097026|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)##AK294127|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)	0.0	
chr22	39129421	39129538	reg1025815.p1	5.475	+	TSC_hg19_v1_chr22_+_39101984 EU831484 EU831571 BC014075 AB385030 CR456501 CU013098 CU013386 U87964	-27452	+	NM_004286 TSC_hg19_v1_chr22_+_39101925	-27614	+	CR456923 CU677177 CU013023 CU013311 CR456473 AK291827 BC015026 D31884 TSC_hg19_v1_chr22_-_39096285 NM_014876	-33255	-	AK304188 TSC_hg19_v1_chr22_-_39150957 AK295787	21504	-	BX537962 NM_001199580 TSC_hg19_v1_chr22_-_39151472	21985	-	TSC_hg19_v1_chr22_-_39151986 BC094797	22513	-	EU831484|GTPBP1|9567|GTP binding protein 1##EU831571|GTPBP1|9567|GTP binding protein 1##BC014075|GTPBP1|9567|GTP binding protein 1##CR456501|GTPBP1|9567|GTP binding protein 1##CU013098|GTPBP1|9567|GTP binding protein 1##CU013386|GTPBP1|9567|GTP binding protein 1##U87964|GTPBP1|9567|GTP binding protein 1##NM_004286|GTPBP1|9567|GTP binding protein 1##CR456923|JOSD1|9929|Josephin domain containing 1##CU013023|JOSD1|9929|Josephin domain containing 1##CU013311|JOSD1|9929|Josephin domain containing 1##CR456473|JOSD1|9929|Josephin domain containing 1##AK291827|JOSD1|9929|Josephin domain containing 1##BC015026|JOSD1|9929|Josephin domain containing 1##D31884|JOSD1|9929|Josephin domain containing 1##NM_014876|JOSD1|9929|Josephin domain containing 1##AK304188|SUN2|25777|Sad1 and UNC84 domain containing 2##AK295787|SUN2|25777|Sad1 and UNC84 domain containing 2##BX537962|SUN2|25777|Sad1 and UNC84 domain containing 2##NM_001199580|SUN2|25777|Sad1 and UNC84 domain containing 2##BC094797|SUN2|25777|Sad1 and UNC84 domain containing 2	0.907594	CTCF.p2:-28:0.908
chr2	74413188	74413369	reg1027219.p1	5.475	+	AJ577474 CU678456 TSC_hg19_v1_chr2_-_74406014 AB016839 AK023321 AK001650 BC003398 NM_018221 AK021657	-7371	-	AL122062 TSC_hg19_v1_chr2_-_74382411	-30897	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	-38058	+	AK057260 TSC_hg19_v1_chr2_-_74425749	12437	-	NM_006636 TSC_hg19_v1_chr2_+_74425741 AK300035 AK130664 AK222826 AK223041 AK302245 AK313138 BC015062 BC001548 BC017054 AB529041 X16396 DQ894679	12459	+	AF243499 AF293338 NM_021196	128872	-	AJ577474|MOB1A|55233|MOB kinase activator 1A##AB016839|MOB1A|55233|MOB kinase activator 1A##AK023321|MOB1A|55233|MOB kinase activator 1A##AK001650|MOB1A|55233|MOB kinase activator 1A##BC003398|MOB1A|55233|MOB kinase activator 1A##NM_018221|MOB1A|55233|MOB kinase activator 1A##AK021657|MOB1A|55233|MOB kinase activator 1A##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##NM_006636|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK300035|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK130664|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK222826|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK223041|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK302245|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK313138|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC015062|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC001548|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC017054|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##X16396|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##DQ894679|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AF243499|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##AF293338|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##NM_021196|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5	0.0	
chr7	140192858	140193019	reg1002470.p1	5.475	+	TSC_hg19_v1_chr7_-_140179348 NM_001145125 NM_013446	-13588	-	TSC_hg19_v1_chr7_-_140179306 AF192784 AL136812 AF117233 BC025955	-13668	-	TSC_hg19_v1_chr7_-_140179165 AB209298 AB527778 DQ892404 EU176516 BC064838 AM236048 BC037400 BC051821 BC012398 AK297361 AK315552	-13776	-	BC132875 BC144190 NM_015689	109388	-	AB033103 TSC_hg19_v1_chr7_-_140340614	147672	-	TSC_hg19_v1_chr7_+_140372910 AF131745 AY302592 NM_052853 BC014107	180000	+	NM_001145125|MKRN1|23608|makorin ring finger protein 1##NM_013446|MKRN1|23608|makorin ring finger protein 1##AF192784|MKRN1|23608|makorin ring finger protein 1##AL136812|MKRN1|23608|makorin ring finger protein 1##AF117233|MKRN1|23608|makorin ring finger protein 1##BC025955|MKRN1|23608|makorin ring finger protein 1##AB209298|MKRN1|23608|makorin ring finger protein 1##DQ892404|MKRN1|23608|makorin ring finger protein 1##EU176516|MKRN1|23608|makorin ring finger protein 1##BC064838|MKRN1|23608|makorin ring finger protein 1##AM236048|MKRN1|23608|makorin ring finger protein 1##BC037400|MKRN1|23608|makorin ring finger protein 1##BC051821|MKRN1|23608|makorin ring finger protein 1##BC012398|MKRN1|23608|makorin ring finger protein 1##AK297361|MKRN1|23608|makorin ring finger protein 1##AK315552|MKRN1|23608|makorin ring finger protein 1##BC132875|DENND2A|27147|DENN/MADD domain containing 2A##BC144190|DENND2A|27147|DENN/MADD domain containing 2A##NM_015689|DENND2A|27147|DENN/MADD domain containing 2A##AB033103|DENND2A|27147|DENN/MADD domain containing 2A##AF131745|ADCK2|90956|aarF domain containing kinase 2##AY302592|ADCK2|90956|aarF domain containing kinase 2##NM_052853|ADCK2|90956|aarF domain containing kinase 2##BC014107|ADCK2|90956|aarF domain containing kinase 2	0.0	
chr9	93537090	93537243	reg1026231.p2	5.475	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	-132047	-	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-1317185	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-1424159	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	26870	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	26901	+	TSC_hg19_v1_chr9_+_93564079 L28824	26912	+	BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase##L28824|SYK|6850|spleen tyrosine kinase	0.0	
chr6_dbb_hap3	2800102	2800231	reg1024810.p1	5.474	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.013387	
chr10	117332709	117332813	reg1026163.p1	5.473	+	TSC_hg19_v1_chr10_+_116853123 BC029592 BC035157 NM_207303 BC139916 BC139923 BC047716	-479613	+	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	-634798	+	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	-751212	+	AB590245 DQ892210 DQ895406 AF042080 U95847 U97144 BC014962 NM_145793	698919	-	AK292886 NM_001145453	699995	-	AF038421 NM_005264 TSC_hg19_v1_chr10_-_118033147	700307	-	BC029592|ATRNL1|26033|attractin-like 1##BC035157|ATRNL1|26033|attractin-like 1##NM_207303|ATRNL1|26033|attractin-like 1##BC139916|ATRNL1|26033|attractin-like 1##BC139923|ATRNL1|26033|attractin-like 1##BC047716|ATRNL1|26033|attractin-like 1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##DQ892210|GFRA1|2674|GDNF family receptor alpha 1##DQ895406|GFRA1|2674|GDNF family receptor alpha 1##AF042080|GFRA1|2674|GDNF family receptor alpha 1##U95847|GFRA1|2674|GDNF family receptor alpha 1##U97144|GFRA1|2674|GDNF family receptor alpha 1##BC014962|GFRA1|2674|GDNF family receptor alpha 1##NM_145793|GFRA1|2674|GDNF family receptor alpha 1##AK292886|GFRA1|2674|GDNF family receptor alpha 1##NM_001145453|GFRA1|2674|GDNF family receptor alpha 1##AF038421|GFRA1|2674|GDNF family receptor alpha 1##NM_005264|GFRA1|2674|GDNF family receptor alpha 1	0.884671	CTCF.p2:16:0.885
chr1	74140774	74140871	reg1023403.p2	5.473	+	TSC_hg19_v1_chr1_-_72748491 AY358132	-1392317	-	TSC_hg19_v1_chr1_-_72748182 AK295481 BX538014 AK092307 AX747470 NM_173808	-1392611	-	NM_005455 NM_203350	-2593851	-	AK131476 BC020778 BX647210 TSC_hg19_v1_chr1_-_74663861 NM_001105659	523026	-	NM_001112808 NM_001199327 NM_001199328 NM_001199329 NM_003838 TSC_hg19_v1_chr1_+_74663927 BC020720 AK294948 AF017445 AK304490 BC032865 AK223254 BC032308 AK299468	523114	+	NM_015978 AF116826 AK307984 BC113539 BC117262 AY303691 HQ258528	560280	+	AK295481|NEGR1|257194|neuronal growth regulator 1##BX538014|NEGR1|257194|neuronal growth regulator 1##AK092307|NEGR1|257194|neuronal growth regulator 1##NM_173808|NEGR1|257194|neuronal growth regulator 1##NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK131476|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BC020778|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BX647210|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001105659|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001112808|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199327|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199328|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_001199329|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_003838|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC020720|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK294948|FPGT|8790|fucose-1-phosphate guanylyltransferase##AF017445|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK304490|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032865|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##AK223254|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032308|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK299468|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_015978|TNNI3K|51086|TNNI3 interacting kinase##AF116826|TNNI3K|51086|TNNI3 interacting kinase##AK307984|TNNI3K|51086|TNNI3 interacting kinase##BC113539|TNNI3K|51086|TNNI3 interacting kinase##BC117262|TNNI3K|51086|TNNI3 interacting kinase##AY303691|TNNI3K|51086|TNNI3 interacting kinase##HQ258528|TNNI3K|51086|TNNI3 interacting kinase	0.774776	CTCF.p2:-2:0.775
chr21	10623560	10623669	reg1028669.p1	5.473	+	None	None	None	None	None	None	None	None	None	AK308254 AK314285 TSC_hg19_v1_chr21_-_10990898 AF007118 AF495908 AY219886 AY219887 AY219888 AL833345 BC028719 NM_199259 NM_199260 NM_199261	367284	-	BC101132 BC101133 BC101134 BC107038 BC107039 BC113810 AF218570 AF339514 AF339515 AF339516 NM_181704 NM_182481 NM_182482 NM_182484 AF527550 AF527551 AF527553 NM_001187 U19180 BC017024 TSC_hg19_v1_chr21_-_11098961 AK292540 BC064647	475285	-	AY172978 NM_174981 AY465173	4358885	+	AK308254|TPTE|7179|transmembrane phosphatase with tensin homology##AK314285|TPTE|7179|transmembrane phosphatase with tensin homology##AF007118|TPTE|7179|transmembrane phosphatase with tensin homology##AF495908|TPTE|7179|transmembrane phosphatase with tensin homology##AY219886|TPTE|7179|transmembrane phosphatase with tensin homology##AY219887|TPTE|7179|transmembrane phosphatase with tensin homology##AY219888|TPTE|7179|transmembrane phosphatase with tensin homology##AL833345|TPTE|7179|transmembrane phosphatase with tensin homology##BC028719|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199259|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199260|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199261|TPTE|7179|transmembrane phosphatase with tensin homology##BC101132|BAGE2|85319|B melanoma antigen family, member 2##BC101133|BAGE2|85319|B melanoma antigen family, member 2##BC101134|BAGE3|85318|B melanoma antigen family, member 3##BC107038|BAGE|574|B melanoma antigen##BC107039|BAGE|574|B melanoma antigen##BC113810|BAGE|574|B melanoma antigen##AF218570|BAGE2|85319|B melanoma antigen family, member 2##AF339514|BAGE3|85318|B melanoma antigen family, member 3##AF339515|BAGE4|85317|B melanoma antigen family, member 4##AF339516|BAGE5|85316|B melanoma antigen family, member 5##NM_181704|BAGE4|85317|B melanoma antigen family, member 4##NM_182481|BAGE3|85318|B melanoma antigen family, member 3##NM_182482|BAGE2|85319|B melanoma antigen family, member 2##NM_182484|BAGE5|85316|B melanoma antigen family, member 5##AF527550|BAGE|574|B melanoma antigen##AF527551|BAGE|574|B melanoma antigen##AF527553|BAGE|574|B melanoma antigen##NM_001187|BAGE|574|B melanoma antigen##U19180|BAGE|574|B melanoma antigen##AK292540|BAGE2|85319|B melanoma antigen family, member 2##AY172978|POTED|317754|POTE ankyrin domain family, member D##NM_174981|POTED|317754|POTE ankyrin domain family, member D##AY465173|POTEB|339010|POTE ankyrin domain family, member B	0.202342	CTCF.p2:-30:0.202
chr7	80310707	80310806	reg1025801.p1	5.473	+	HM217020 HM217021 HM217022 HM217023 HM217024 HM217025 HM217026 AB590184 CU678951 DQ893062 DQ896314 TSC_hg19_v1_chr7_+_80276126	-34709	+	L06850 NM_001127443 NM_001127444	-35059	+	TSC_hg19_v1_chr7_+_80267983 M98398 M98399 M24795	-42753	+	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	237678	-	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	237918	-	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	1088618	-	HM217020|CD36|948|CD36 molecule (thrombospondin receptor)##HM217021|CD36|948|CD36 molecule (thrombospondin receptor)##HM217022|CD36|948|CD36 molecule (thrombospondin receptor)##HM217023|CD36|948|CD36 molecule (thrombospondin receptor)##HM217024|CD36|948|CD36 molecule (thrombospondin receptor)##HM217025|CD36|948|CD36 molecule (thrombospondin receptor)##HM217026|CD36|948|CD36 molecule (thrombospondin receptor)##DQ893062|CD36|948|CD36 molecule (thrombospondin receptor)##DQ896314|CD36|948|CD36 molecule (thrombospondin receptor)##L06850|CD36|948|CD36 molecule (thrombospondin receptor)##NM_001127443|CD36|948|CD36 molecule (thrombospondin receptor)##NM_001127444|CD36|948|CD36 molecule (thrombospondin receptor)##M98398|CD36|948|CD36 molecule (thrombospondin receptor)##M98399|CD36|948|CD36 molecule (thrombospondin receptor)##M24795|CD36|948|CD36 molecule (thrombospondin receptor)##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)	0.027959	
chr8	23019498	23019598	reg1024993.p1	5.473	+	NM_003841 AK298664 BC017852 TSC_hg19_v1_chr8_+_22960433 AK313213 AK298718 AF012536 AY358281 AF016267 AF033854 AF014794 BC125041 BC125042 AF020502 AF012629 CR541857	-59068	+	TSC_hg19_v1_chr8_-_22926545 AF192548 AF016266 AF016268 AF153687 AK291216 AF012535 AF016849 AY358277 BX538104 AK298602 BC001281 NM_003842 NM_147187	-92954	-	AB451272 AB451399 AF012628 AF018657 AF018658 AF020501 AF022386 CR541898 AB385139 TSC_hg19_v1_chr8_-_22926429	-93129	-	AF023849 AF021232 AF021233 AF029761 AY358285 BC052270 AK313528 NM_003840 TSC_hg19_v1_chr8_-_23021544	1947	-	FJ795027 AB590225 BT006906 CU680426 DQ891791 DQ894973 JF729355 U90875 TSC_hg19_v1_chr8_-_23082598 AK291299 BC012866	63064	-	TSC_hg19_v1_chr8_-_23082664 NM_003844	63118	-	NM_003841|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298664|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC017852|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK313213|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298718|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012536|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AY358281|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF016267|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF033854|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF014794|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125041|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125042|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF020502|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012629|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##CR541857|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF192548|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016266|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016268|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF153687|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK291216|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012535|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016849|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AY358277|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BX538104|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK298602|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BC001281|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003842|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_147187|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AB451272|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AB451399|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012628|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018657|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018658|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF020501|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF022386|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##CR541898|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF023849|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF021232|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF021233|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF029761|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AY358285|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##BC052270|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AK313528|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##NM_003840|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##FJ795027|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BT006906|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ891791|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ894973|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##JF729355|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##U90875|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##AK291299|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BC012866|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##NM_003844|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a	0.981924	CTCF.p2:3:0.982
chr11	131087141	131087298	reg1002582.p1	5.472	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-300831	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-300874	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-768557	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	153250	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	693405	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	694120	+	NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin	0.0	
chr12	6679558	6679675	reg1026368.p1	5.472	+	TSC_hg19_v1_chr12_-_6677453 BC000656 BC065257 AK129852 BC106072 BC082985 BC128183 BC128184 AK056208 AK307582 NM_001033714 NM_006170	-2150	-	TSC_hg19_v1_chr12_-_6665250 BC001790 BC010431 BC023664 BC110387 NM_001039670 NM_001193457 NM_080730	-14358	-	M36164 TSC_hg19_v1_chr12_+_6647482	-32199	+	CR936680 EU446505 TSC_hg19_v1_chr12_-_6715604	35952	-	X86691 TSC_hg19_v1_chr12_-_6716523 BC014964 BC025962 BC038596	36885	-	AK128741 NM_001273 TSC_hg19_v1_chr12_-_6716562	36940	-	BC000656|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC065257|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK129852|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC106072|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC082985|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC128183|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC128184|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK056208|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK307582|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##NM_001033714|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##NM_006170|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC001790|IFFO1|25900|intermediate filament family orphan 1##BC010431|IFFO1|25900|intermediate filament family orphan 1##BC023664|IFFO1|25900|intermediate filament family orphan 1##BC110387|IFFO1|25900|intermediate filament family orphan 1##NM_001039670|IFFO1|25900|intermediate filament family orphan 1##NM_001193457|IFFO1|25900|intermediate filament family orphan 1##NM_080730|IFFO1|25900|intermediate filament family orphan 1##M36164|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##CR936680|CHD4|1108|chromodomain helicase DNA binding protein 4##EU446505|CHD4|1108|chromodomain helicase DNA binding protein 4##X86691|CHD4|1108|chromodomain helicase DNA binding protein 4##BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4##BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4##BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4##AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4##NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4	0.96759	CTCF.p2:7:0.968
chr14	69263080	69263260	reg1022496.p2	5.471	+	NM_001244701 AB528867	-186	-	NM_001244698 NM_004926	-2540	-	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	-3450	-	TSC_hg19_v1_chr14_-_69354901 BX641076	91769	-	BX248020 AK299362 TSC_hg19_v1_chr14_-_69444987	181816	-	BT007207 AB590251 DQ890778 DQ895768 EU716325 FJ410030 TSC_hg19_v1_chr14_-_69445830 M95178 BC015766	182660	-	NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BX641076|ACTN1|87|actinin, alpha 1##BX248020|ACTN1|87|actinin, alpha 1##AK299362|ACTN1|87|actinin, alpha 1##BT007207|ACTN1|87|actinin, alpha 1##DQ890778|ACTN1|87|actinin, alpha 1##DQ895768|ACTN1|87|actinin, alpha 1##EU716325|ACTN1|87|actinin, alpha 1##FJ410030|ACTN1|87|actinin, alpha 1##M95178|ACTN1|87|actinin, alpha 1##BC015766|ACTN1|87|actinin, alpha 1	0.052282	
chr21	35802149	35802272	reg1026885.p2	5.471	+	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	-54385	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	-65864	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	-356281	+	AY789480 NM_001127670 EU008570	25862	-	AK311384 AY789479 EU008568 EU008569 AK313543 BC036452 NM_001127668 NM_001127669	29668	-	AK304336 NM_000219 BC069055	81442	-	NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK311384|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AY789479|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008568|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008569|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK313543|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC036452|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127668|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127669|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK304336|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_000219|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC069055|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1	1.028947	CTCF.p2:-22:0.993
chr3	152553158	152553296	reg1028685.p2	5.471	+	NM_002563 Z49205	-492	+	AY358260 NM_001123228	-494449	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-536034	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	326799	+	TSC_hg19_v1_chr3_+_152880058 BC012362	326821	+	AF086445 NM_001101337	649056	+	NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79	0.0	
chr3	178161558	178161693	reg1024979.p1	5.471	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1246566	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	-1246674	-	TSC_hg19_v1_chr3_-_176914267 BX648935	-1247375	-	BC017825 NM_181361	92598	+	AF209747 NM_005832	114927	+	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	627940	-	AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3	0.603641	CTCF.p2:-36:0.604
chr4	105372872	105373019	reg1026438.p2	5.471	+	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-732045	-	AB527246 AB209996 TSC_hg19_v1_chr4_-_104119535 AK290362 NM_001813 Z15005	-1253425	-	AK128463 TSC_hg19_v1_chr4_-_104020987 AF164790 AK023323 AK290160 AK291335 AK300626 BC037277 BC095414 AY358841 BC001953 NM_020139	-1351945	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	39537	-	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	43108	-	BX640738 NM_017628	694086	+	BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##AB209996|CENPE|1062|centromere protein E, 312kDa##AK290362|CENPE|1062|centromere protein E, 312kDa##NM_001813|CENPE|1062|centromere protein E, 312kDa##Z15005|CENPE|1062|centromere protein E, 312kDa##AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##AK127778|CXXC4|80319|CXXC finger protein 4##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2	0.906428	CTCF.p2:-4:0.906
chr8	140659267	140659343	reg1022437.p2	5.471	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	-733061	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-1150199	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-4189104	+	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	55977	-	AB067469 TSC_hg19_v1_chr8_-_141467841	808520	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	808553	-	AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9	0.934618	CTCF.p2:5:0.918
chr11	35019761	35019941	reg1006217.p2	5.470	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-81694	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-81962	-	NM_001135024 NM_001166158 NM_003477	-82175	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	140549	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	140883	+	TSC_hg19_v1_chr11_+_35160821 M59040	140967	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr1	59762741	59762883	reg1023434.p3	5.470	+	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	-200	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-513077	-	TSC_hg19_v1_chr1_-_59248287 BC009874	-514447	-	NM_001244714 AK054842	12941	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	517840	+	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	629573	-	NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##BC009874|JUN|3725|jun proto-oncogene##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2	0.074487	
chr18	4119985	4120095	reg1025734.p1	5.470	+	AK294777 AK294717 NM_001242762 NM_001242763	-245313	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	-245756	-	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	-274710	-	AK304101 TSC_hg19_v1_chr18_-_4455255	335213	-	AK316099 NM_001242761 NM_004746 TSC_hg19_v1_chr18_-_4455271	335230	-	TSC_hg19_v1_chr18_-_5197257 NM_001145194	1077212	-	AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK304101|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK316099|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242761|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_004746|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42	0.503966	CTCF.p2:-36:0.504
chr2	111612426	111612593	reg1026643.p2	5.470	+	AK300513 NM_001142807 BC022268	-122330	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-176687	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-176866	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	265978	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	1029117	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	1029252	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.976903	CTCF.p2:-16:0.977
chr2	71451192	71451297	reg1024846.p1	5.470	+	TSC_hg19_v1_chr2_+_71357768 AK310931 BC041084 X98494	-93459	+	TSC_hg19_v1_chr2_+_71357454 AK056862 NM_005791 BC126389	-93755	+	DQ891375 DQ894553 TSC_hg19_v1_chr2_-_71357360 BC020825 AF364547 NM_032601	-93865	-	TSC_hg19_v1_chr2_-_71454205 AB032981 NM_020459	2986	-	TSC_hg19_v1_chr2_+_71503722 AK303723 AK309221 AK293938	52482	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	107653	+	AK310931|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC041084|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##X98494|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##AK056862|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##NM_005791|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC126389|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##DQ891375|MCEE|84693|methylmalonyl CoA epimerase##DQ894553|MCEE|84693|methylmalonyl CoA epimerase##BC020825|MCEE|84693|methylmalonyl CoA epimerase##AF364547|MCEE|84693|methylmalonyl CoA epimerase##NM_032601|MCEE|84693|methylmalonyl CoA epimerase##AB032981|PAIP2B|400961|poly(A) binding protein interacting protein 2B##NM_020459|PAIP2B|400961|poly(A) binding protein interacting protein 2B##AK303723|ZNF638|27332|zinc finger protein 638##AK309221|ZNF638|27332|zinc finger protein 638##AK293938|ZNF638|27332|zinc finger protein 638##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638	0.977876	CTCF.p2:15:0.978
chr2	88292208	88292369	reg1025235.p2	5.470	+	CR749330 NM_001024457	-6980	-	AK302429 NM_001078170	-167003	-	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	-244669	+	AF208845 AF217520 NM_016618 TSC_hg19_v1_chr2_-_88355252 BC015927	62971	-	BC107580 TSC_hg19_v1_chr2_-_88355283	62998	-	BC126191 NM_198274 AK091724 AX747145 BC017915 BX647878 AL832035 AB527846 EU831908 EU832002 HQ258264 AY518933	75061	+	CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##AK302429|RGPD2|729857|RANBP2-like and GRIP domain containing 2##NM_001078170|RGPD2|729857|RANBP2-like and GRIP domain containing 2##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1##AF208845|KRCC1|51315|lysine-rich coiled-coil 1##AF217520|KRCC1|51315|lysine-rich coiled-coil 1##NM_016618|KRCC1|51315|lysine-rich coiled-coil 1##BC015927|KRCC1|51315|lysine-rich coiled-coil 1##BC107580|KRCC1|51315|lysine-rich coiled-coil 1##BC126191|SMYD1|150572|SET and MYND domain containing 1##NM_198274|SMYD1|150572|SET and MYND domain containing 1##AK091724|SMYD1|150572|SET and MYND domain containing 1##BC017915|SMYD1|150572|SET and MYND domain containing 1##BX647878|SMYD1|150572|SET and MYND domain containing 1##AL832035|SMYD1|150572|SET and MYND domain containing 1##EU831908|SMYD1|150572|SET and MYND domain containing 1##EU832002|SMYD1|150572|SET and MYND domain containing 1##HQ258264|SMYD1|150572|SET and MYND domain containing 1##AY518933|SMYD1|150572|SET and MYND domain containing 1	0.0	
chr9	35903127	35903227	reg1023299.p1	5.470	+	AY726589 NM_001004487 BC136715 BC136716	-32789	-	TSC_hg19_v1_chr9_+_35829375 BC064951 NM_001042590 BC082765	-73699	+	TSC_hg19_v1_chr9_+_35829262 NM_016446 BC043384 NM_001042589 AF188239	-73934	+	AY358408 NM_001039792	3011	+	HQ258184 BC104869 BC113651 NM_019897	54945	-	TSC_hg19_v1_chr9_+_36036901 AK292653 NM_021111 AK315073 BC050306 BC032240 BC060806 BC137093 CU687432	133770	+	AY726589|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##NM_001004487|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136715|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136716|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC064951|TMEM8B|51754|transmembrane protein 8B##NM_001042590|TMEM8B|51754|transmembrane protein 8B##BC082765|TMEM8B|51754|transmembrane protein 8B##NM_016446|TMEM8B|51754|transmembrane protein 8B##BC043384|TMEM8B|51754|transmembrane protein 8B##NM_001042589|TMEM8B|51754|transmembrane protein 8B##AF188239|TMEM8B|51754|transmembrane protein 8B##AY358408|HRCT1|646962|histidine rich carboxyl terminus 1##NM_001039792|HRCT1|646962|histidine rich carboxyl terminus 1##HQ258184|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC104869|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC113651|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##NM_019897|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs	0.994247	CTCF.p2:-4:0.994
chr16	67203733	67203835	reg1025025.p1	5.469	+	TSC_hg19_v1_chr16_+_67198690 AK225152 AK296210 AB463724 AB029348 D87673	-5088	+	TSC_hg19_v1_chr16_+_67198637 BC130383	-5142	+	AK293631 TSC_hg19_v1_chr16_+_67198611	-5187	+	NM_001185058 AK294145 AK092623 AX747633	643	+	NM_003946 NM_001185057 AF043244 TSC_hg19_v1_chr16_+_67207847 AK314899 BC012798 AF064600 AF064599	4045	+	TSC_hg19_v1_chr16_-_67217476 AK094787 AK096855 BC080183	13657	-	AK225152|HSF4|3299|heat shock transcription factor 4##AK296210|HSF4|3299|heat shock transcription factor 4##AB029348|HSF4|3299|heat shock transcription factor 4##D87673|HSF4|3299|heat shock transcription factor 4##BC130383|HSF4|3299|heat shock transcription factor 4##AK293631|HSF4|3299|heat shock transcription factor 4##NM_001185058|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AK294145|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AK092623|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##NM_003946|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##NM_001185057|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AF043244|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AK314899|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##BC012798|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AF064600|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AF064599|NOL3|8996|nucleolar protein 3 (apoptosis repressor with CARD domain)##AK094787|KIAA0895L|653319|KIAA0895-like##AK096855|KIAA0895L|653319|KIAA0895-like##BC080183|KIAA0895L|653319|KIAA0895-like	0.300401	CTCF.p2:-23:0.300
chr17_gl000205_random	25218	25328	reg1027036.p1	5.469	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.055654	
chr2	12467060	12467182	reg1025344.p1	5.469	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-580346	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-656830	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-784278	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	390132	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	390795	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	391276	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.15369	
chr2	89977700	89977811	reg1026412.p1	5.469	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-357902	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-464522	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-535166	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	99999	+	TSC_hg19_v1_chr2_+_90211706 Z69013	233963	+	TSC_hg19_v1_chr2_-_91847997 BC030764	1870248	-	BC070334|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus	0.990748	CTCF.p2:18:0.991
chr12	51159177	51159288	reg1025407.p2	5.468	+	TSC_hg19_v1_chr12_+_51158275 AK299240	-974	+	TSC_hg19_v1_chr12_+_51157883 NM_005171 AK313406 BC029619	-1354	+	TSC_hg19_v1_chr12_+_50898778 BC075027	-260333	+	NM_182559 BC035123 BC048112 CU690554	77491	+	TSC_hg19_v1_chr12_+_51318519 NM_014033	159292	+	TSC_hg19_v1_chr12_+_51318801 AY358797 AK024409 AK307071 AK225689 AK225595 AK023693 AK293356 AJ536233 BC008180 BC004492 AB590800 EU832657 EU832734 AL050159 AF113007	159569	+	AK299240|ATF1|466|activating transcription factor 1##NM_005171|ATF1|466|activating transcription factor 1##AK313406|ATF1|466|activating transcription factor 1##BC029619|ATF1|466|activating transcription factor 1##BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##NM_182559|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC035123|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC048112|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##NM_014033|METTL7A|25840|methyltransferase like 7A##AY358797|METTL7A|25840|methyltransferase like 7A##AK024409|METTL7A|25840|methyltransferase like 7A##AK307071|METTL7A|25840|methyltransferase like 7A##AK225689|METTL7A|25840|methyltransferase like 7A##AK225595|METTL7A|25840|methyltransferase like 7A##AK023693|METTL7A|25840|methyltransferase like 7A##AK293356|METTL7A|25840|methyltransferase like 7A##AJ536233|METTL7A|25840|methyltransferase like 7A##BC008180|METTL7A|25840|methyltransferase like 7A##BC004492|METTL7A|25840|methyltransferase like 7A##EU832657|METTL7A|25840|methyltransferase like 7A##EU832734|METTL7A|25840|methyltransferase like 7A##AL050159|METTL7A|25840|methyltransferase like 7A##AF113007|METTL7A|25840|methyltransferase like 7A	0.999446	CTCF.p2:3:0.999
chr12	53568911	53569008	reg1026180.p1	5.468	+	AB044561 NM_001244706	-10683	-	TSC_hg19_v1_chr12_+_53497289 AF059203 BC096090 BC096091 BC096092 BC099626 AF099031	-71635	+	NM_003578 TSC_hg19_v1_chr12_+_53497278	-71684	+	AF116545 AF116546 AF116547 AF116548 BC018042 AK315265 BC047466 NM_015989	5445	-	TSC_hg19_v1_chr12_+_53574505 AK292744	5532	+	TSC_hg19_v1_chr12_+_53574527 BC053557 NM_001004304	5593	+	AB044561|CSAD|51380|cysteine sulfinic acid decarboxylase##NM_001244706|CSAD|51380|cysteine sulfinic acid decarboxylase##AF059203|SOAT2|8435|sterol O-acyltransferase 2##BC096090|SOAT2|8435|sterol O-acyltransferase 2##BC096091|SOAT2|8435|sterol O-acyltransferase 2##BC096092|SOAT2|8435|sterol O-acyltransferase 2##BC099626|SOAT2|8435|sterol O-acyltransferase 2##AF099031|SOAT2|8435|sterol O-acyltransferase 2##NM_003578|SOAT2|8435|sterol O-acyltransferase 2##AF116545|CSAD|51380|cysteine sulfinic acid decarboxylase##AF116546|CSAD|51380|cysteine sulfinic acid decarboxylase##AF116547|CSAD|51380|cysteine sulfinic acid decarboxylase##AF116548|CSAD|51380|cysteine sulfinic acid decarboxylase##BC018042|CSAD|51380|cysteine sulfinic acid decarboxylase##AK315265|CSAD|51380|cysteine sulfinic acid decarboxylase##BC047466|CSAD|51380|cysteine sulfinic acid decarboxylase##NM_015989|CSAD|51380|cysteine sulfinic acid decarboxylase##AK292744|ZNF740|283337|zinc finger protein 740##BC053557|ZNF740|283337|zinc finger protein 740##NM_001004304|ZNF740|283337|zinc finger protein 740	0.847503	CTCF.p2:-19:0.848
chr22	21942346	21942491	reg1028208.p1	5.468	+	TSC_hg19_v1_chr22_+_21922030 AB528270 CU013202 CU013490 X92962	-20375	+	TSC_hg19_v1_chr22_+_21922021 AK311761 AK291083 AK293179	-20396	+	TSC_hg19_v1_chr22_+_21922018 AJ000519 AK125396 S81003	-20402	+	TSC_hg19_v1_chr22_-_21984304 BC064568 BC053663 BC017281 BC110075 BC110799 BC057814 NM_001017964 BC096754	41897	-	TSC_hg19_v1_chr22_-_21984367 BC133043 BC133047	41982	-	TSC_hg19_v1_chr22_+_21987057 AK302030 AK093365 AX748079 BC033499 NM_152612	44608	+	CU013202|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##CU013490|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##X92962|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK311761|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK291083|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK293179|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AJ000519|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK125396|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##S81003|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##BC064568|YDJC|150223|YdjC homolog (bacterial)##BC053663|YDJC|150223|YdjC homolog (bacterial)##BC017281|YDJC|150223|YdjC homolog (bacterial)##BC110075|YDJC|150223|YdjC homolog (bacterial)##BC110799|YDJC|150223|YdjC homolog (bacterial)##BC057814|YDJC|150223|YdjC homolog (bacterial)##NM_001017964|YDJC|150223|YdjC homolog (bacterial)##BC096754|YDJC|150223|YdjC homolog (bacterial)##BC133043|YDJC|150223|YdjC homolog (bacterial)##BC133047|YDJC|150223|YdjC homolog (bacterial)##AK302030|CCDC116|164592|coiled-coil domain containing 116##AK093365|CCDC116|164592|coiled-coil domain containing 116##BC033499|CCDC116|164592|coiled-coil domain containing 116##NM_152612|CCDC116|164592|coiled-coil domain containing 116	0.0	
chr2	6496622	6496781	reg1027567.p1	5.468	+	U23752 AB028641 NM_003108 BC025789 AB464713	-663886	+	AK302299 NM_018436 BC029652	-2790904	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-2854132	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	509199	-	TSC_hg19_v1_chr2_-_7006650 AK308509	510002	-	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	521162	+	U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2	0.0	
chr11	90021503	90021625	reg1022134.p1	5.467	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-37154	+	AK290231 NM_001144073 NM_012124	-65033	-	CU687242 BC002339 BC072461 TSC_hg19_v1_chr11_-_89956218 AF192466 AK226099 AK225565 AK312663 AF123249 AK225365	-65362	-	NM_001008781	2063697	+	BC069163 NM_005959 U25341 AY521019	2681275	+	TSC_hg19_v1_chr11_-_92930978 CU690400	2909423	-	AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC002339|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC072461|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF192466|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK226099|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225565|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK312663|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF123249|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225365|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B	0.995972	CTCF.p2:2:0.996
chr3	5099440	5099558	reg1002604.p1	5.467	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-78145	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	-78318	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	-78383	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	64456	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	64592	+	TSC_hg19_v1_chr3_+_5229344 AK298511	129828	+	AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	0.0	
chr4	20396944	20397048	reg1024778.p1	5.467	+	AB017168 NM_004787 BC117190 BC143978 AF133270	-141660	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-2373530	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-2584385	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	305071	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	588633	-	AY118170 DQ148489 NM_147183 AK290998	908573	-	AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4##AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4	0.950382	CTCF.p2:-4:0.950
chr8	114214649	114214765	reg1025680.p2	5.467	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-3227741	-	NM_001099743 NM_001099744	-3510688	-	AK290469 NM_001099745 NM_001099746	-3521474	-	AB114605 NM_198124	174674	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	234422	-	TSC_hg19_v1_chr8_-_116680208 AK304046	2465513	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.997053	CTCF.p2:-12:0.997
chr8	54148692	54148803	reg1026439.p1	5.467	+	BC069117 BC107101 NM_005285	-296280	+	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	-521734	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	-521761	-	BC099912 AK310407 AY168006 NM_000912 AY466378	15465	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	606932	-	AK022345 TSC_hg19_v1_chr8_-_54755834	607080	-	BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1##BC099912|OPRK1|4986|opioid receptor, kappa 1##AK310407|OPRK1|4986|opioid receptor, kappa 1##AY168006|OPRK1|4986|opioid receptor, kappa 1##NM_000912|OPRK1|4986|opioid receptor, kappa 1##AY466378|OPRK1|4986|opioid receptor, kappa 1##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H	0.0	
chr16	53010845	53010991	reg1029360.p1	5.466	+	AK299202 NM_001146188	-429205	-	NM_001080430	-430113	-	NM_001242473	-903072	-	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	77963	+	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	122181	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	154142	+	AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##NM_001242473|LOC388276|388276|hCG2045437##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9	0.060705	
chr17	55518333	55518438	reg1024766.p1	5.466	+	AK093888 AX748353 NM_170721	-184012	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-184412	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-355242	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	409019	-	AK000746 NM_017949	462364	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	514291	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.253319	CTCF.p2:-12:0.253
chr7	105817405	105817586	reg1001682.p2	5.466	+	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	-64480	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	-64751	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	-64814	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	107867	-	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	108028	-	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	484008	-	EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##X61382|SYPL1|6856|synaptophysin-like 1##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74	0.0	
chr7	138818399	138818536	reg1024896.p1	5.466	+	BC025308 BC033105 BC040956 NM_020119 NM_024625 BX571742 TSC_hg19_v1_chr7_-_138794467	-24037	-	TSC_hg19_v1_chr7_-_138794133 AK292811	-24294	-	AK055851 BX647974 TSC_hg19_v1_chr7_-_138794101	-24366	-	NM_001144920 NM_001144923 NM_024926 TSC_hg19_v1_chr7_+_138818523 AK295092 AK022633 AK300807 BC013912 AL137393 AK299132 BC034466 BC126331 BC130339 BC144151 AK293444	61	+	NM_173569	97763	+	AK298166 NM_001244585 TSC_hg19_v1_chr7_+_139025217	206705	+	BC025308|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BC033105|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BC040956|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##NM_020119|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##NM_024625|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BX571742|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##AK292811|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##AK055851|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BX647974|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##NM_001144920|TTC26|79989|tetratricopeptide repeat domain 26##NM_001144923|TTC26|79989|tetratricopeptide repeat domain 26##NM_024926|TTC26|79989|tetratricopeptide repeat domain 26##AK295092|TTC26|79989|tetratricopeptide repeat domain 26##AK022633|TTC26|79989|tetratricopeptide repeat domain 26##AK300807|TTC26|79989|tetratricopeptide repeat domain 26##BC013912|TTC26|79989|tetratricopeptide repeat domain 26##AL137393|TTC26|79989|tetratricopeptide repeat domain 26##AK299132|TTC26|79989|tetratricopeptide repeat domain 26##BC034466|TTC26|79989|tetratricopeptide repeat domain 26##BC126331|TTC26|79989|tetratricopeptide repeat domain 26##BC130339|TTC26|79989|tetratricopeptide repeat domain 26##BC144151|TTC26|79989|tetratricopeptide repeat domain 26##AK293444|TTC26|79989|tetratricopeptide repeat domain 26##NM_173569|UBN2|254048|ubinuclein 2##AK298166|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##NM_001244585|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)	0.0	
chrX	128920408	128920571	reg1026359.p2	5.466	+	TSC_hg19_v1_chrX_+_128913898 AK314869 AK292023 BC051881 AL049683 AB528892	-6505	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	-6602	+	AK300954 U90724 NM_003399 BC126174 BC143901	-47513	+	AK001524 BC000035 AB209807 TSC_hg19_v1_chrX_-_128977481 NM_001008222	56936	-	TSC_hg19_v1_chrX_-_128977856 AL161962 AK096967 AF151847 AY358558 BC006200 BC012826 BC003128 AK001112 AY952881 NM_016032	57339	-	TSC_hg19_v1_chrX_+_129040144 NM_001166221 NM_006649 AK291918 AK298578 BC009649 BC001149 AK304563 BC014987 AF039694 AB590128 CU679427 DQ892549 DQ895760	119642	+	AK314869|SASH3|54440|SAM and SH3 domain containing 3##AK292023|SASH3|54440|SAM and SH3 domain containing 3##BC051881|SASH3|54440|SAM and SH3 domain containing 3##AL049683|SASH3|54440|SAM and SH3 domain containing 3##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3##AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_001166221|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_006649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK291918|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK298578|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC009649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC001149|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK304563|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC014987|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ892549|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ895760|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)	0.0	
chr15	101693154	101693266	reg1025203.p1	5.465	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-233698	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-233736	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-273139	+	AB071402 TSC_hg19_v1_chr15_-_101791795	98526	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	98925	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	124453	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.0	
chr15	45145810	45145967	reg1000537.p2	5.465	+	NM_080745 NM_182985	-117329	+	BC031266 TSC_hg19_v1_chr15_+_45021331	-124557	+	AK311550 TSC_hg19_v1_chr15_+_45021275 DQ232883	-124635	+	BC029537 NM_152448 DQ890983 DQ894158	103020	+	NM_003104 TSC_hg19_v1_chr15_+_45315395 AK312444 U07361 L29008 BC021085 AK295656 AK296574 AK309672 BC025295 AB529056 DQ892769 DQ896016	169502	+	TSC_hg19_v1_chr15_-_45406336 AF230496	260443	-	NM_080745|TRIM69|140691|tripartite motif containing 69##NM_182985|TRIM69|140691|tripartite motif containing 69##BC031266|TRIM69|140691|tripartite motif containing 69##DQ232883|TRIM69|140691|tripartite motif containing 69##BC029537|C15orf43|145645|chromosome 15 open reading frame 43##NM_152448|C15orf43|145645|chromosome 15 open reading frame 43##DQ890983|C15orf43|145645|chromosome 15 open reading frame 43##DQ894158|C15orf43|145645|chromosome 15 open reading frame 43##NM_003104|SORD|6652|sorbitol dehydrogenase##AK312444|SORD|6652|sorbitol dehydrogenase##U07361|SORD|6652|sorbitol dehydrogenase##L29008|SORD|6652|sorbitol dehydrogenase##BC021085|SORD|6652|sorbitol dehydrogenase##AK296574|SORD|6652|sorbitol dehydrogenase##AK309672|SORD|6652|sorbitol dehydrogenase##BC025295|SORD|6652|sorbitol dehydrogenase##DQ892769|SORD|6652|sorbitol dehydrogenase##DQ896016|SORD|6652|sorbitol dehydrogenase##AF230496|DUOX2|50506|dual oxidase 2	0.0	
chr17	31203659	31203828	reg1007903.p1	5.465	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-388983	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-389146	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-389672	+	CU688936 AB385376 AB018270 BC146763 NM_015194	152	-	TSC_hg19_v1_chr17_-_31204141 AK127942	380	-	TSC_hg19_v1_chr17_-_31204196 BC030602	470	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.0	
chr6	20400853	20400945	reg1023954.p2	5.465	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	-188227	-	TSC_hg19_v1_chr6_+_19838612 AF085889	-562216	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	-563264	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	1204	+	CR749285 NM_001243076	3134	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	133824	+	BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1	0.0	
chr22	24317191	24317300	reg1024192.p2	5.464	+	BT006970 CU012991 CU013279 DQ891571 DQ894765 U84143 AK298326 AK292044 CR456431 BC005971 AK296189 AK304122 AK315943 BC015508 NM_001084392	-605	-	NM_001084393 AK296110 AK296189 AK298326	-8191	+	CR456929 L38503 CU013079 CU013097 CU013367 CU013385 DQ890742 AB528145 CR456500 BC071700 CR456374 BC146929 BC146936 NM_001080843 BC002415 AK312043 NM_000854 BC146940 BC146943	-13858	-	NM_001355 U49785	4773	-	BC146940 BC146943 NM_000854 AK312043 BC002415 BC146929 BC146936 BC071700 CR456374 CR456500 AB528145 CU013079 CU013097 CU013367 CU013385 DQ890742 CR456929 L38503	5073	+	TSC_hg19_v1_chr22_+_24373110 NM_001144931	55867	+	BT006970|DDT|1652|D-dopachrome tautomerase##CU012991|DDT|1652|D-dopachrome tautomerase##CU013279|DDT|1652|D-dopachrome tautomerase##DQ891571|DDT|1652|D-dopachrome tautomerase##DQ894765|DDT|1652|D-dopachrome tautomerase##U84143|DDT|1652|D-dopachrome tautomerase##AK292044|DDT|1652|D-dopachrome tautomerase##CR456431|DDT|1652|D-dopachrome tautomerase##BC005971|DDT|1652|D-dopachrome tautomerase##BC015508|DDT|1652|D-dopachrome tautomerase##NM_001084392|DDT|1652|D-dopachrome tautomerase##NM_001084393|DDTL|100037417|D-dopachrome tautomerase-like##AK296110|DDTL|100037417|D-dopachrome tautomerase-like##CR456929|GSTT2|2953|glutathione S-transferase theta 2##L38503|GSTT2|2953|glutathione S-transferase theta 2##CU013079|GSTT2|2953|glutathione S-transferase theta 2##CU013097|GSTT2|2953|glutathione S-transferase theta 2##CU013367|GSTT2|2953|glutathione S-transferase theta 2##CU013385|GSTT2|2953|glutathione S-transferase theta 2##DQ890742|GSTT2|2953|glutathione S-transferase theta 2##CR456500|GSTT2|2953|glutathione S-transferase theta 2##BC071700|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##CR456374|GSTT2|2953|glutathione S-transferase theta 2##BC146929|GSTT2|2953|glutathione S-transferase theta 2##BC146936|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##NM_001080843|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##BC002415|GSTT2|2953|glutathione S-transferase theta 2##AK312043|GSTT2|2953|glutathione S-transferase theta 2##NM_000854|GSTT2|2953|glutathione S-transferase theta 2##BC146940|GSTT2|2953|glutathione S-transferase theta 2##BC146943|GSTT2|2953|glutathione S-transferase theta 2##NM_001355|DDT|1652|D-dopachrome tautomerase##U49785|DDT|1652|D-dopachrome tautomerase##BC146940|GSTT2|2953|glutathione S-transferase theta 2##BC146943|GSTT2|2953|glutathione S-transferase theta 2##NM_000854|GSTT2|2953|glutathione S-transferase theta 2##AK312043|GSTT2|2953|glutathione S-transferase theta 2##BC002415|GSTT2|2953|glutathione S-transferase theta 2##BC146929|GSTT2|2953|glutathione S-transferase theta 2##BC146936|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##BC071700|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##CR456374|GSTT2|2953|glutathione S-transferase theta 2##CR456500|GSTT2|2953|glutathione S-transferase theta 2##CU013079|GSTT2|2953|glutathione S-transferase theta 2##CU013097|GSTT2|2953|glutathione S-transferase theta 2##CU013367|GSTT2|2953|glutathione S-transferase theta 2##CU013385|GSTT2|2953|glutathione S-transferase theta 2##DQ890742|GSTT2|2953|glutathione S-transferase theta 2##CR456929|GSTT2|2953|glutathione S-transferase theta 2##L38503|GSTT2|2953|glutathione S-transferase theta 2##NM_001144931|LOC391322|391322|D-dopachrome tautomerase-like	0.997785	CTCF.p2:16:0.998
chr3	122977786	122977929	reg1030074.p1	5.464	+	NM_012430 TSC_hg19_v1_chr3_+_122920787 AK315771 AF100749	-57067	+	NM_006810 TSC_hg19_v1_chr3_+_122785922 BC001625 D49490	-191939	+	TSC_hg19_v1_chr3_-_122746605 AK309848	-231249	-	AK303070 NM_001199642	157331	-	AB527359 NM_183357	189534	-	TSC_hg19_v1_chr3_-_123303927 CU687458 AK289983 NM_198402 AK125375 BC060839 AY191814 BC049369	326076	-	NM_012430|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK315771|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AF100749|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##NM_006810|PDIA5|10954|protein disulfide isomerase family A, member 5##BC001625|PDIA5|10954|protein disulfide isomerase family A, member 5##D49490|PDIA5|10954|protein disulfide isomerase family A, member 5##AK309848|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK303070|ADCY5|111|adenylate cyclase 5##NM_001199642|ADCY5|111|adenylate cyclase 5##NM_183357|ADCY5|111|adenylate cyclase 5##AK289983|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##NM_198402|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC060839|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AY191814|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC049369|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	0.201237	CTCF.p2:22:0.201
chr3	42232884	42233065	reg1007257.p2	5.464	+	TSC_hg19_v1_chr3_+_42201684 BX647199 NM_014965 BC015922 AK000754 AM392573 AM393596 CU677507 EU446989	-31219	+	AL713787 TSC_hg19_v1_chr3_+_42190865	-42127	+	TSC_hg19_v1_chr3_+_42190749 AK294221	-42226	+	BC008283 NM_001174138	72464	-	BC111026 NM_000729	74687	-	AF326749 BC016747 NM_144634	219069	-	BX647199|TRAK1|22906|trafficking protein, kinesin binding 1##NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1##BC015922|TRAK1|22906|trafficking protein, kinesin binding 1##AK000754|TRAK1|22906|trafficking protein, kinesin binding 1##AM392573|TRAK1|22906|trafficking protein, kinesin binding 1##AM393596|TRAK1|22906|trafficking protein, kinesin binding 1##EU446989|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##BC008283|CCK|885|cholecystokinin##NM_001174138|CCK|885|cholecystokinin##BC111026|CCK|885|cholecystokinin##NM_000729|CCK|885|cholecystokinin##AF326749|LYZL4|131375|lysozyme-like 4##BC016747|LYZL4|131375|lysozyme-like 4##NM_144634|LYZL4|131375|lysozyme-like 4	0.0	
chr5	172571401	172571522	reg1024077.p1	5.464	+	TSC_hg19_v1_chr5_+_172484383 AK297424	-87078	+	TSC_hg19_v1_chr5_+_172483354 BX647768 NM_001168393 NM_001168394 NM_153607 AK300043 AY139008 BC041709 AY174896 AK124117 BX647573 AK291677	-88077	+	TSC_hg19_v1_chr5_+_172410833 CR456856 CR542131	-160617	+	NM_001205 NM_013978 NM_013979 NM_013980 BC010959 TSC_hg19_v1_chr5_+_172571536 AF083957 AF083958 U15172 AB527856 CU679862 AF083956 AY216799	35	+	AB021133 CU693024 AB464641 DQ893313 DQ894104 DQ896627 BC025711 AK290615 AK307249 AK297844 AK307218 AK309495 U34962 AK307247 NM_001166175 NM_001166176 NM_004387	90738	-	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	183801	-	AK297424|C5orf41|153222|chromosome 5 open reading frame 41##BX647768|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41##NM_153607|C5orf41|153222|chromosome 5 open reading frame 41##AK300043|C5orf41|153222|chromosome 5 open reading frame 41##AY139008|C5orf41|153222|chromosome 5 open reading frame 41##BC041709|C5orf41|153222|chromosome 5 open reading frame 41##AY174896|C5orf41|153222|chromosome 5 open reading frame 41##AK124117|C5orf41|153222|chromosome 5 open reading frame 41##BX647573|C5orf41|153222|chromosome 5 open reading frame 41##AK291677|C5orf41|153222|chromosome 5 open reading frame 41##CR456856|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR542131|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##NM_001205|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013978|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013979|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013980|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##BC010959|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083957|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083958|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##U15172|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083956|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AY216799|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AB021133|NKX2-5|1482|NK2 homeobox 5##DQ893313|NKX2-5|1482|NK2 homeobox 5##DQ894104|NKX2-5|1482|NK2 homeobox 5##DQ896627|NKX2-5|1482|NK2 homeobox 5##BC025711|NKX2-5|1482|NK2 homeobox 5##AK290615|NKX2-5|1482|NK2 homeobox 5##AK307249|NKX2-5|1482|NK2 homeobox 5##AK297844|NKX2-5|1482|NK2 homeobox 5##AK307218|NKX2-5|1482|NK2 homeobox 5##AK309495|NKX2-5|1482|NK2 homeobox 5##U34962|NKX2-5|1482|NK2 homeobox 5##AK307247|NKX2-5|1482|NK2 homeobox 5##NM_001166175|NKX2-5|1482|NK2 homeobox 5##NM_001166176|NKX2-5|1482|NK2 homeobox 5##NM_004387|NKX2-5|1482|NK2 homeobox 5##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2	0.918905	CTCF.p2:-11:0.919
chr8	33278747	33278866	reg1025751.p1	5.464	+	TSC_hg19_v1_chr8_+_32785485 BC034319	-493317	+	NM_001159996 AK293270 AK293240	-699414	+	AK289927 NM_013959	-774556	+	TSC_hg19_v1_chr8_-_33330616 BC004884	51807	-	AK098505 AK297132 TSC_hg19_v1_chr8_-_33330636 AK303231 AJ512465 AJ535838 AJ535839 AK292993 AJ582015 NM_032664	51840	-	NM_032509 TSC_hg19_v1_chr8_+_33342703 AK314491 AK225476 AK027469 BC015965 AF251062 BC039740 BC028230 BC050528 CU690708	63898	+	NM_001159996|NRG1|3084|neuregulin 1##AK293270|NRG1|3084|neuregulin 1##AK293240|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1##BC004884|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK098505|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK297132|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK303231|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ512465|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535838|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535839|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK292993|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ582015|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032664|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032509|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK314491|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK225476|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK027469|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC015965|MAK16|84549|MAK16 homolog (S. cerevisiae)##AF251062|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC039740|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC028230|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC050528|MAK16|84549|MAK16 homolog (S. cerevisiae)	0.981158	CTCF.p2:19:0.981
chr10	107734691	107734808	reg1025382.p1	5.463	+	BC117417 TSC_hg19_v1_chr10_+_106401047	-1333704	+	AB028982 NM_014978	-1333891	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-1621208	+	TSC_hg19_v1_chr10_-_108459000 AK123752	724310	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	1189627	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	3948460	-	BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.140222	
chr11	70329254	70329341	reg1025508.p1	5.463	+	TSC_hg19_v1_chr11_+_70244653 NM_001184740 NM_005231 NM_138565 AK222613 AK291097 BC033889 BC008799 M98343	-84644	+	TSC_hg19_v1_chr11_-_70244476 AK125463	-84782	-	D49354 TSC_hg19_v1_chr11_+_70194450	-134876	+	AF141901 BC114484 BC113876 TSC_hg19_v1_chr11_-_70507895	178570	-	TSC_hg19_v1_chr11_-_70507919 AB208027 NM_133266	178621	-	BC093885 BC112097 BC143389 TSC_hg19_v1_chr11_-_70507947	178653	-	NM_001184740|CTTN|2017|cortactin##NM_005231|CTTN|2017|cortactin##NM_138565|CTTN|2017|cortactin##AK222613|CTTN|2017|cortactin##AK291097|CTTN|2017|cortactin##BC033889|CTTN|2017|cortactin##BC008799|CTTN|2017|cortactin##M98343|CTTN|2017|cortactin##D49354|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##AF141901|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC114484|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC113876|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AB208027|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##NM_133266|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC093885|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC112097|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC143389|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2	0.884634	CTCF.p2:-3:0.885
chr1	21660755	21660936	reg1013110.p1	5.463	+	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	-43911	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	-44137	-	D43698 TSC_hg19_v1_chr1_-_21606025 BX648351 NM_001113347	-54762	-	X98272 TSC_hg19_v1_chr1_-_21671998 NM_001113348	11135	-	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	105837	+	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	175014	+	Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##D43698|ECE1|1889|endothelin converting enzyme 1##BX648351|ECE1|1889|endothelin converting enzyme 1##NM_001113347|ECE1|1889|endothelin converting enzyme 1##X98272|ECE1|1889|endothelin converting enzyme 1##NM_001113348|ECE1|1889|endothelin converting enzyme 1##AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney	0.0	
chr17	27899984	27900089	reg1026940.p1	5.463	+	BC001593 NM_138349 TSC_hg19_v1_chr17_+_27895738	-4298	+	TSC_hg19_v1_chr17_+_27895730 AB110209 AK075341	-4329	+	TSC_hg19_v1_chr17_-_27894056 BC012476 NM_198147 AY358212	-6012	-	AB384970 AF124490 AB209537 AK299932 TSC_hg19_v1_chr17_-_27916543	16434	-	TSC_hg19_v1_chr17_-_27916606 BC067358 NM_001085454 NM_014030	16570	-	TSC_hg19_v1_chr17_-_27916646 AK294785 BC048196	16619	-	BC001593|TP53I13|90313|tumor protein p53 inducible protein 13##NM_138349|TP53I13|90313|tumor protein p53 inducible protein 13##AB110209|TP53I13|90313|tumor protein p53 inducible protein 13##AK075341|TP53I13|90313|tumor protein p53 inducible protein 13##BC012476|ABHD15|116236|abhydrolase domain containing 15##NM_198147|ABHD15|116236|abhydrolase domain containing 15##AY358212|ABHD15|116236|abhydrolase domain containing 15##AF124490|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AB209537|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AK299932|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC067358|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_001085454|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_014030|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AK294785|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC048196|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1	0.880663	CTCF.p2:-3:0.881
chr17	70475404	70475522	reg1026262.p1	5.463	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-358223	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-358293	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-358304	+	AK000477 TSC_hg19_v1_chr17_-_70588944	113480	-	AF331643 TSC_hg19_v1_chr17_-_71088816	613353	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	613360	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	1.727587	CTCF.p2:22:0.996	CTCF.p2:-44:0.731
chr2	163154607	163154698	reg1024241.p1	5.463	+	BC026250 AF007822 U76833 AK315448 AK309260 AK297118 NM_004460 U09278	-54692	-	NM_002054	-145739	-	BC065265 NM_001935 TSC_hg19_v1_chr2_-_162931062	-223596	-	CU692330 BC111750 AY017378 AF095844 NM_022168 BC078180 TSC_hg19_v1_chr2_-_163175195 BC046208 AK292941 AK314611	20431	-	NM_012198 TSC_hg19_v1_chr2_+_163200610	45946	+	TSC_hg19_v1_chr2_+_163200633 AK312349 M81637 BC005214 AB209768 AB529141 CU675051 AK295413	46109	+	BC026250|FAP|2191|fibroblast activation protein, alpha##AF007822|FAP|2191|fibroblast activation protein, alpha##U76833|FAP|2191|fibroblast activation protein, alpha##AK315448|FAP|2191|fibroblast activation protein, alpha##AK309260|FAP|2191|fibroblast activation protein, alpha##AK297118|FAP|2191|fibroblast activation protein, alpha##NM_004460|FAP|2191|fibroblast activation protein, alpha##U09278|FAP|2191|fibroblast activation protein, alpha##NM_002054|GCG|2641|glucagon##BC065265|DPP4|1803|dipeptidyl-peptidase 4##NM_001935|DPP4|1803|dipeptidyl-peptidase 4##BC111750|IFIH1|64135|interferon induced with helicase C domain 1##AY017378|IFIH1|64135|interferon induced with helicase C domain 1##AF095844|IFIH1|64135|interferon induced with helicase C domain 1##NM_022168|IFIH1|64135|interferon induced with helicase C domain 1##BC078180|IFIH1|64135|interferon induced with helicase C domain 1##BC046208|IFIH1|64135|interferon induced with helicase C domain 1##AK292941|IFIH1|64135|interferon induced with helicase C domain 1##AK314611|IFIH1|64135|interferon induced with helicase C domain 1##NM_012198|GCA|25801|grancalcin, EF-hand calcium binding protein##AK312349|GCA|25801|grancalcin, EF-hand calcium binding protein##M81637|GCA|25801|grancalcin, EF-hand calcium binding protein##BC005214|GCA|25801|grancalcin, EF-hand calcium binding protein##AB209768|GCA|25801|grancalcin, EF-hand calcium binding protein##AK295413|GCA|25801|grancalcin, EF-hand calcium binding protein	0.997861	CTCF.p2:-15:0.998
chr22	30783549	30783650	reg1005027.p2	5.463	+	NM_001017981 AB464176	-297	-	TSC_hg19_v1_chr22_-_30752884 BC007684 AK303273 NM_001005409 NM_005877	-30663	-	TSC_hg19_v1_chr22_-_30752874 AB463284 CU013174 CU013462 DQ892687 DQ895931 BC001976 X85237 CR456575	-30787	-	NM_001204204 NM_012429 NM_033382 AL096881 TSC_hg19_v1_chr22_+_30793006 AK223587 BC048337 AK314390 AK091402 BC058915 AB033012 CR456571 AK303751 AK296540 CU013170 CU013458	9416	+	NM_001003704 NM_016498 AF151076 AF060924 BC030989 AK026104 BC009300 TSC_hg19_v1_chr22_+_30821776 BC001608 BC014446 CR456345 BC046132 AB528187 CU013056 CU013344	38140	+	AY158086 BC069641 BC101001 BC101002 BC101003 BC101004 AK298079 AK131358 AY240872 NM_174975	84389	-	NM_001017981|RNF215|200312|ring finger protein 215##BC007684|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##AK303273|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##NM_001005409|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##NM_005877|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CU013174|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CU013462|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##DQ892687|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##DQ895931|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##BC001976|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##X85237|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CR456575|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##NM_001204204|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_012429|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_033382|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AL096881|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK223587|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##BC048337|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK314390|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK091402|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##BC058915|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AB033012|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CR456571|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK303751|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##AK296540|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CU013170|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##CU013458|SEC14L2|23541|SEC14-like 2 (S. cerevisiae)##NM_001003704|MTFP1|51537|mitochondrial fission process 1##NM_016498|MTFP1|51537|mitochondrial fission process 1##AF151076|MTFP1|51537|mitochondrial fission process 1##AF060924|MTFP1|51537|mitochondrial fission process 1##BC030989|MTFP1|51537|mitochondrial fission process 1##AK026104|MTFP1|51537|mitochondrial fission process 1##BC009300|MTFP1|51537|mitochondrial fission process 1##BC001608|MTFP1|51537|mitochondrial fission process 1##BC014446|MTFP1|51537|mitochondrial fission process 1##CR456345|MTFP1|51537|mitochondrial fission process 1##BC046132|MTFP1|51537|mitochondrial fission process 1##AY158086|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC069641|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101001|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101002|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101003|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##BC101004|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AK298079|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AK131358|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##AY240872|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)##NM_174975|SEC14L3|266629|SEC14-like 3 (S. cerevisiae)	0.999865	
chr7	23224717	23224843	reg1025262.p1	5.463	+	NM_007342 AK312991 U97198 TSC_hg19_v1_chr7_+_23221673 BC005327 AK300113 BC107583 BT007409 CU675113 AK298183	-3202	+	NM_018846	-78864	+	TSC_hg19_v1_chr7_+_23145403 AK297595 AL136597 AK296219 AK297369 BC039585 BC009555 AF111113 AK290479 EF560731 EU831631 EU831716 EU831829	-79256	+	TSC_hg19_v1_chr7_+_23286300 AK304671 NM_001005340 NM_002510	61516	+	AK297051 TSC_hg19_v1_chr7_+_23286384 X76534	61604	+	AK297055 AK303071 AK312279 TSC_hg19_v1_chr7_+_23286386	61606	+	NM_007342|NUPL2|11097|nucleoporin like 2##AK312991|NUPL2|11097|nucleoporin like 2##U97198|NUPL2|11097|nucleoporin like 2##BC005327|NUPL2|11097|nucleoporin like 2##AK300113|NUPL2|11097|nucleoporin like 2##BC107583|NUPL2|11097|nucleoporin like 2##BT007409|NUPL2|11097|nucleoporin like 2##AK298183|NUPL2|11097|nucleoporin like 2##NM_018846|KLHL7|55975|kelch-like 7 (Drosophila)##AK297595|KLHL7|55975|kelch-like 7 (Drosophila)##AL136597|KLHL7|55975|kelch-like 7 (Drosophila)##AK296219|KLHL7|55975|kelch-like 7 (Drosophila)##AK297369|KLHL7|55975|kelch-like 7 (Drosophila)##BC039585|KLHL7|55975|kelch-like 7 (Drosophila)##BC009555|KLHL7|55975|kelch-like 7 (Drosophila)##AF111113|KLHL7|55975|kelch-like 7 (Drosophila)##AK290479|KLHL7|55975|kelch-like 7 (Drosophila)##EF560731|KLHL7|55975|kelch-like 7 (Drosophila)##EU831631|KLHL7|55975|kelch-like 7 (Drosophila)##EU831716|KLHL7|55975|kelch-like 7 (Drosophila)##EU831829|KLHL7|55975|kelch-like 7 (Drosophila)##AK304671|GPNMB|10457|glycoprotein (transmembrane) nmb##NM_001005340|GPNMB|10457|glycoprotein (transmembrane) nmb##NM_002510|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297051|GPNMB|10457|glycoprotein (transmembrane) nmb##X76534|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297055|GPNMB|10457|glycoprotein (transmembrane) nmb##AK303071|GPNMB|10457|glycoprotein (transmembrane) nmb##AK312279|GPNMB|10457|glycoprotein (transmembrane) nmb	0.0	
chrX	8751192	8751312	reg1025444.p2	5.463	+	TSC_hg19_v1_chrX_-_8700193 BC137426 BC137427 M97252 NM_000216 S60085	-51045	-	X60299 TSC_hg19_v1_chrX_-_8700155	-51109	-	AF167078 AF167080 NM_001001888	-318382	+	BC113449 BC143805 NM_001171186 BC112022 AF494343 NM_174951	18148	-	BC120955 BC120956 NM_205849	249850	-	TSC_hg19_v1_chrX_+_9431357 AK289409 NM_001139466 NM_001139467 NM_001139468 AK290962 BC032708	680095	+	BC137426|KAL1|3730|Kallmann syndrome 1 sequence##BC137427|KAL1|3730|Kallmann syndrome 1 sequence##M97252|KAL1|3730|Kallmann syndrome 1 sequence##NM_000216|KAL1|3730|Kallmann syndrome 1 sequence##S60085|KAL1|3730|Kallmann syndrome 1 sequence##X60299|KAL1|3730|Kallmann syndrome 1 sequence##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167080|VCX3B|425054|variable charge, X-linked 3B##NM_001001888|VCX3B|425054|variable charge, X-linked 3B##BC113449|FAM9A|171482|family with sequence similarity 9, member A##BC143805|FAM9A|171482|family with sequence similarity 9, member A##NM_001171186|FAM9A|171482|family with sequence similarity 9, member A##BC112022|FAM9A|171482|family with sequence similarity 9, member A##AF494343|FAM9A|171482|family with sequence similarity 9, member A##NM_174951|FAM9A|171482|family with sequence similarity 9, member A##BC120955|FAM9B|171483|family with sequence similarity 9, member B##BC120956|FAM9B|171483|family with sequence similarity 9, member B##NM_205849|FAM9B|171483|family with sequence similarity 9, member B##AK289409|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139466|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139467|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139468|TBL1X|6907|transducin (beta)-like 1X-linked##AK290962|TBL1X|6907|transducin (beta)-like 1X-linked##BC032708|TBL1X|6907|transducin (beta)-like 1X-linked	0.957029	CTCF.p2:23:0.957
chr1	183925889	183926025	reg1025353.p1	5.462	+	AK311716 TSC_hg19_v1_chr1_+_183774253 AF186779 AB023176 AK304293 BC039250 AK309237 AK311701	-151666	+	BC021711 NM_203454 AK098557	-303509	-	NM_015149 AF186780 BX537416 AK316526 AK295179 AK295611 BC136591	-320615	+	AB385353 CU690156 AK293973 TSC_hg19_v1_chr1_-_184006634	80608	-	AB011156 AF288389 NM_015101 BC035672 AK095192 TSC_hg19_v1_chr1_-_184006893	80907	-	TSC_hg19_v1_chr1_+_184020866 AF288394 NM_001127394 NM_052965 BC022030 AK098196 CU692464 AK296655 AK307241	94903	+	AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC021711|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##NM_203454|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##AK098557|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK293973|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AB011156|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AF288389|GLT25D2|23127|glycosyltransferase 25 domain containing 2##NM_015101|GLT25D2|23127|glycosyltransferase 25 domain containing 2##BC035672|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AK095192|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AF288394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##NM_001127394|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##NM_052965|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##BC022030|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AK098196|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AK296655|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)##AK307241|TSEN15|116461|tRNA splicing endonuclease 15 homolog (S. cerevisiae)	0.0	
chr12	56652179	56652264	reg1025969.p2	5.462	+	TSC_hg19_v1_chr12_-_56652169 NM_173595 AK098479 AB190990 AK125379	-72	-	NM_001135195 AK172768 TSC_hg19_v1_chr12_+_56624545 BC027884	-27658	+	NM_173596 TSC_hg19_v1_chr12_+_56623836 AK298331 AK313188	-28384	+	TSC_hg19_v1_chr12_+_56660663 NM_144576	8410	+	TSC_hg19_v1_chr12_+_56660725 AK057003 BC073923	8525	+	BC047444 TSC_hg19_v1_chr12_+_56660935 AY358861	8712	+	NM_173595|ANKRD52|283373|ankyrin repeat domain 52##AB190990|ANKRD52|283373|ankyrin repeat domain 52##AK125379|ANKRD52|283373|ankyrin repeat domain 52##NM_001135195|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##AK172768|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##BC027884|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##NM_173596|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##AK298331|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##AK313188|SLC39A5|283375|solute carrier family 39 (metal ion transporter), member 5##NM_144576|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)##AK057003|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)##BC073923|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)##BC047444|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)##AY358861|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)	0.500719	CTCF.p2:-8:0.501
chr2	183515516	183515582	reg1011357.p1	5.462	+	AK295657 AB384753 DQ892369 DQ893372 DQ895578 DQ896694 AF110237 NM_005019 BC022480 AF110240 AF110236 NM_001003683 U40370 AK294239	-128265	-	NM_001080545 AK129898 AF494535 BX647581 BC017943	-664900	+	TSC_hg19_v1_chr2_+_182756689 BC052581 BC064499 BC028706 AK291745 BX647257 AB116937 AB385517 BX647967 AK304238 BX648888	-758756	+	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	65525	+	TSC_hg19_v1_chr2_+_183582683 BC107425 AF314529 AY089971 HQ258514 HQ258651 AL832646 AK027450	67198	+	TSC_hg19_v1_chr2_+_183608333 AK074905	92801	+	AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC052581|SSFA2|6744|sperm specific antigen 2##BC064499|SSFA2|6744|sperm specific antigen 2##BC028706|SSFA2|6744|sperm specific antigen 2##AK291745|SSFA2|6744|sperm specific antigen 2##BX647257|SSFA2|6744|sperm specific antigen 2##AB116937|SSFA2|6744|sperm specific antigen 2##BX647967|SSFA2|6744|sperm specific antigen 2##AK304238|SSFA2|6744|sperm specific antigen 2##BX648888|SSFA2|6744|sperm specific antigen 2##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC107425|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF314529|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY089971|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258514|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258651|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832646|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027450|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK074905|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	0.0	
chr2	236711802	236711982	reg1027697.p2	5.462	+	TSC_hg19_v1_chr2_+_236403297 AB384114 AF413078	-308582	+	TSC_hg19_v1_chr2_+_236402950 BC140856	-308915	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	-309089	+	AK311262 TSC_hg19_v1_chr2_-_237076045	364122	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	364740	-	NM_212556 BX647589	461102	-	AF413078|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18	0.73286	CTCF.p2:24:0.733
chr22	45497857	45497983	reg1025988.p2	5.462	+	TSC_hg19_v1_chr22_-_45405781 AK092243 AX747427 NM_001135862	-92126	-	AB489146 CU012999 CU013287 CU680262 CR456448 BC012187 NM_138415	-92416	-	TSC_hg19_v1_chr22_-_45404785 AK299836 AK297317 AK091480 AX747013 NM_001242450	-93091	-	NM_007172 TSC_hg19_v1_chr22_+_45559808	61851	+	TSC_hg19_v1_chr22_+_45559866 AK314454 BC070133	61946	+	AK304223 TSC_hg19_v1_chr22_+_45559883 BC016055 AF107840 AL389949 AL389950	62100	+	AK092243|PHF21B|112885|PHD finger protein 21B##NM_001135862|PHF21B|112885|PHD finger protein 21B##CU012999|PHF21B|112885|PHD finger protein 21B##CU013287|PHF21B|112885|PHD finger protein 21B##CR456448|PHF21B|112885|PHD finger protein 21B##BC012187|PHF21B|112885|PHD finger protein 21B##NM_138415|PHF21B|112885|PHD finger protein 21B##AK299836|PHF21B|112885|PHD finger protein 21B##AK297317|PHF21B|112885|PHD finger protein 21B##AK091480|PHF21B|112885|PHD finger protein 21B##NM_001242450|PHF21B|112885|PHD finger protein 21B##NM_007172|NUP50|10762|nucleoporin 50kDa##AK314454|NUP50|10762|nucleoporin 50kDa##BC070133|NUP50|10762|nucleoporin 50kDa##AK304223|NUP50|10762|nucleoporin 50kDa##BC016055|NUP50|10762|nucleoporin 50kDa##AF107840|NUP50|10762|nucleoporin 50kDa##AL389949|NUP50|10762|nucleoporin 50kDa##AL389950|NUP50|10762|nucleoporin 50kDa	0.976227	CTCF.p2:-16:0.976
chr7	74684357	74684469	reg1027343.p2	5.462	+	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	-176039	+	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	-194721	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	-194775	-	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	183107	-	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	304157	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	340552	+	NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73	0.0	
chr11	10928170	10928283	reg1025434.p2	5.461	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-48440	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-48708	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-97429	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	715352	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	934790	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	935265	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.858108	CTCF.p2:-8:0.858
chr1	148340265	148340402	reg1025971.p1	5.461	+	NM_001164261 NM_001164262	-137798	-	TSC_hg19_v1_chr1_-_148176396 BC110832	-163937	-	AL117237 NM_015383 BC094705	-314479	-	NM_001170755 AK097180	217894	+	NM_173638 BC023087	220584	+	NM_001102663 AK290302 AY894566	237083	+	NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##AL117237|NBPF14|25832|neuroblastoma breakpoint family, member 14##NM_015383|NBPF14|25832|neuroblastoma breakpoint family, member 14##BC094705|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15##AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_173638|NBPF15|284565|neuroblastoma breakpoint family, member 15##BC023087|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15	0.701931	CTCF.p2:0:0.702
chr10	82422516	82422651	reg1019500.p1	5.460	+	AK123978 NM_001145719	-122009	+	AK123885 NM_207372	-124926	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-208479	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	1212499	+	DQ857894 NM_001165973	1214859	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3476674	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.999917	CTCF.p2:3:1.000
chr2	45956987	45957110	reg1023605.p1	5.460	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-77974	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-118641	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-161920	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	567543	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	567927	+	NM_001145051	749655	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.323535	CTCF.p2:-11:0.324
chr5	168133704	168133816	reg1027572.p2	5.460	+	TSC_hg19_v1_chr5_-_168006609 BC013705 NM_024594	-127245	-	TSC_hg19_v1_chr5_-_168006352 AK223285 AK022961	-127409	-	TSC_hg19_v1_chr5_+_167956546 AX721195	-177143	+	TSC_hg19_v1_chr5_-_168271862 BC023515	138099	-	AB383998 AK310549 TSC_hg19_v1_chr5_-_168728144 BC142665 BC142717 AY358884 AB017169 BC098388 AB011538 BC146759 NM_003062	594198	-	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	876961	+	BC013705|PANK3|79646|pantothenate kinase 3##NM_024594|PANK3|79646|pantothenate kinase 3##AK223285|PANK3|79646|pantothenate kinase 3##AK022961|PANK3|79646|pantothenate kinase 3##AK310549|SLIT3|6586|slit homolog 3 (Drosophila)##BC142665|SLIT3|6586|slit homolog 3 (Drosophila)##BC142717|SLIT3|6586|slit homolog 3 (Drosophila)##AY358884|SLIT3|6586|slit homolog 3 (Drosophila)##AB017169|SLIT3|6586|slit homolog 3 (Drosophila)##BC098388|SLIT3|6586|slit homolog 3 (Drosophila)##AB011538|SLIT3|6586|slit homolog 3 (Drosophila)##BC146759|SLIT3|6586|slit homolog 3 (Drosophila)##NM_003062|SLIT3|6586|slit homolog 3 (Drosophila)##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99	0.051555	
chr10	71560952	71561067	reg1024823.p4	5.459	+	NM_145306 BC013587	-171002	+	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	-227909	-	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	-349676	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	648	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	680	+	TSC_hg19_v1_chr10_+_71562275 M59217	1282	+	NM_145306|C10orf35|219738|chromosome 10 open reading frame 35##BC013587|C10orf35|219738|chromosome 10 open reading frame 35##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##M59217|COL13A1|1305|collagen, type XIII, alpha 1	0.984831	CTCF.p2:15:0.985
chr14	89892361	89892512	reg1025453.p1	5.459	+	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	-9026	-	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-13660	-	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-601443	+	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	193159	-	BC001787 BX247991 AK298930 AK094740 NM_145231	528624	-	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	529810	+	BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1	0.029888	
chr1	51554302	51554430	reg1025316.p1	5.459	+	TSC_hg19_v1_chr1_+_51435925 U17074 CU674290 AB587581 CR450289 DQ891516 DQ894707	-118391	+	NM_078626	-118725	+	TSC_hg19_v1_chr1_+_51434477 AK021794 BC017036	-119888	+	AK130995 NM_001136508	13536	+	TSC_hg19_v1_chr1_+_51701939 AK293047	147561	+	TSC_hg19_v1_chr1_+_51701944 NM_014372	147583	+	U17074|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##CR450289|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##DQ891516|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##DQ894707|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##NM_078626|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##AK021794|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##BC017036|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##AK130995|C1orf185|284546|chromosome 1 open reading frame 185##NM_001136508|C1orf185|284546|chromosome 1 open reading frame 185##AK293047|RNF11|26994|ring finger protein 11##NM_014372|RNF11|26994|ring finger protein 11	0.186658	
chr19	5690182	5690338	reg1025279.p2	5.459	+	CU690982 TSC_hg19_v1_chr19_+_5687370	-2932	+	TSC_hg19_v1_chr19_+_5681182 BC053546 BC072434 BC018336	-9092	+	TSC_hg19_v1_chr19_+_5681023 BC094798 AY268351 AY313895 AY313896 NM_198704 NM_198705 AK308206 AY313894 NM_198533 AY268353 NM_198707 BC062777 AY268352 AY268354 NM_198706 NM_198708	-9215	+	TSC_hg19_v1_chr19_+_5690306 NM_033643 BC091508 AL050273 AY590779 AK311990	28	+	TSC_hg19_v1_chr19_+_5690307 BC004971	57	+	TSC_hg19_v1_chr19_+_5690333 NM_015414 BC003052 AF077043 AM393173 AM393746 DQ892096 DQ895289 CR533465	165	+	BC053546|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##BC072434|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##BC018336|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##BC094798|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY268351|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY313895|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY313896|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_198704|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_198705|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AK308206|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY313894|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_198533|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY268353|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_198707|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##BC062777|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY268352|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY268354|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_198706|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_198708|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_033643|RPL36|25873|ribosomal protein L36##BC091508|RPL36|25873|ribosomal protein L36##AL050273|RPL36|25873|ribosomal protein L36##AK311990|RPL36|25873|ribosomal protein L36##BC004971|RPL36|25873|ribosomal protein L36##NM_015414|RPL36|25873|ribosomal protein L36##BC003052|RPL36|25873|ribosomal protein L36##AF077043|RPL36|25873|ribosomal protein L36##AM393173|RPL36|25873|ribosomal protein L36##AM393746|RPL36|25873|ribosomal protein L36##DQ892096|RPL36|25873|ribosomal protein L36##DQ895289|RPL36|25873|ribosomal protein L36##CR533465|RPL36|25873|ribosomal protein L36	0.596927	CTCF.p2:-36:0.597
chr20	24762160	24762249	reg1026476.p2	5.459	+	TSC_hg19_v1_chr20_+_24450295 BC030637	-311902	+	AK024282 NM_024893	-312370	+	BC040904 NM_178311	-792789	-	TSC_hg19_v1_chr20_+_24929865 NM_003650	167659	+	TSC_hg19_v1_chr20_+_24929907 AF031824 BC015507 AB015225 CU677327 BT009825 AF036342 CR541860 CR541878	167818	+	TSC_hg19_v1_chr20_-_24973355 CU678464 BC003501	211126	-	BC030637|SYNDIG1|79953|synapse differentiation inducing 1##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1##BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_003650|CST7|8530|cystatin F (leukocystatin)##AF031824|CST7|8530|cystatin F (leukocystatin)##BC015507|CST7|8530|cystatin F (leukocystatin)##AB015225|CST7|8530|cystatin F (leukocystatin)##BT009825|CST7|8530|cystatin F (leukocystatin)##AF036342|CST7|8530|cystatin F (leukocystatin)##CR541860|CST7|8530|cystatin F (leukocystatin)##CR541878|CST7|8530|cystatin F (leukocystatin)##BC003501|C20orf3|57136|chromosome 20 open reading frame 3	0.994642	CTCF.p2:0:0.995
chr8	137467230	137467377	reg1028075.p1	5.459	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-997102	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-997645	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1742029	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2041803	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2458941	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3247979	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.897661	CTCF.p2:7:0.898
chr11	81749304	81749465	reg1024462.p1	5.458	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-2597660	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-3463489	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-3463592	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	695514	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	862133	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	863390	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.929245	CTCF.p2:2:0.364	CTCF.p2:3:0.565
chr14	105442172	105442309	reg1000067.p1	5.458	+	TSC_hg19_v1_chr14_-_105436817 BC004283 AK094143	-5420	-	TSC_hg19_v1_chr14_+_105391215 AK090449 BC015003	-51015	+	TSC_hg19_v1_chr14_+_105391174 AY358843 NM_138790	-51064	+	NM_138420 TSC_hg19_v1_chr14_-_105444718	2468	-	AK057249 NM_174891 BC137495 BC144671	10403	+	TSC_hg19_v1_chr14_-_105487410 AF322239 BC011736 BC025263	45147	-	BC004283|AHNAK2|113146|AHNAK nucleoprotein 2##AK094143|AHNAK2|113146|AHNAK nucleoprotein 2##BC015003|PLD4|122618|phospholipase D family, member 4##AY358843|PLD4|122618|phospholipase D family, member 4##NM_138790|PLD4|122618|phospholipase D family, member 4##NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2##AK057249|C14orf79|122616|chromosome 14 open reading frame 79##NM_174891|C14orf79|122616|chromosome 14 open reading frame 79##BC137495|C14orf79|122616|chromosome 14 open reading frame 79##BC144671|C14orf79|122616|chromosome 14 open reading frame 79##AF322239|CDCA4|55038|cell division cycle associated 4##BC011736|CDCA4|55038|cell division cycle associated 4##BC025263|CDCA4|55038|cell division cycle associated 4	0.929051	CTCF.p2:-25:0.929
chr20	42038067	42038181	reg1028520.p1	5.458	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	-219614	-	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-1791063	-	AB089149 NM_052846	-2042627	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	48368	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	48479	+	TSC_hg19_v1_chr20_+_42136336 NM_032107 AK299199	98220	+	AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6##NM_032107|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK299199|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)	0.501943	CTCF.p2:8:0.502
chr3	139879543	139879658	reg1022388.p1	5.458	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-225348	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-225582	+	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	-482772	-	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	517359	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	781167	+	TSC_hg19_v1_chr3_+_140770412 BC051354	890878	+	AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.019389	
chr9	126960009	126960144	reg1017357.p2	5.458	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-186005	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-186193	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-267765	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	59934	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	60169	+	TSC_hg19_v1_chr9_+_127020255 AB026289	60188	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr16	85206206	85206364	reg1027558.p1	5.457	+	BC093665 BC111944 AK126284 NM_198491	-60231	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-144915	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-161156	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	438736	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	440668	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	516257	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.186037	
chr18	31331702	31331838	reg1025215.p2	5.457	+	AB051500 TSC_hg19_v1_chr18_+_31319257	-12564	+	NM_030632 AK131454	-173211	+	BX648108 TSC_hg19_v1_chr18_-_31158297	-173541	-	AK296539 NM_001198549	296796	-	NM_001198547	470663	-	AK297185 BC000313 TSC_hg19_v1_chr18_-_31803319	471473	-	AB051500|ASXL3|80816|additional sex combs like 3 (Drosophila)##NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)##AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)##AK296539|NOL4|8715|nucleolar protein 4##NM_001198549|NOL4|8715|nucleolar protein 4##NM_001198547|NOL4|8715|nucleolar protein 4##AK297185|NOL4|8715|nucleolar protein 4##BC000313|NOL4|8715|nucleolar protein 4	0.996702	CTCF.p2:-18:0.997
chr3	172554334	172554447	reg1024667.p1	5.457	+	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	-82088	+	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	-85866	+	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	-125500	-	BC034496 AF345909 AF404758 AK093041 AX747878 NM_031955	304618	-	BC032555 NM_014932	561853	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	1604330	+	BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC034496|SPATA16|83893|spermatogenesis associated 16##AF345909|SPATA16|83893|spermatogenesis associated 16##AF404758|SPATA16|83893|spermatogenesis associated 16##AK093041|SPATA16|83893|spermatogenesis associated 16##NM_031955|SPATA16|83893|spermatogenesis associated 16##BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	0.966536	CTCF.p2:-5:0.967
chrX	139747228	139747385	reg1023492.p2	5.457	+	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	-160054	-	BC137148 BC137149 NM_001013403	-699630	-	BC132728 BC132730 AJ580093 AJ580094 NM_001010986 NM_173694	-832891	-	TSC_hg19_v1_chrX_+_139791923 AK054978	44621	+	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	119346	-	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	337500	+	NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##BC132728|ATP11C|286410|ATPase, class VI, type 11C##BC132730|ATP11C|286410|ATPase, class VI, type 11C##AJ580093|ATP11C|286410|ATPase, class VI, type 11C##AJ580094|ATP11C|286410|ATPase, class VI, type 11C##NM_001010986|ATP11C|286410|ATPase, class VI, type 11C##NM_173694|ATP11C|286410|ATPase, class VI, type 11C##AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1	0.941866	CTCF.p2:10:0.942
chr6	2854453	2854633	reg1024858.p1	5.456	+	TSC_hg19_v1_chr6_-_2842202 AK304641 AK309765	-12346	-	TSC_hg19_v1_chr6_-_2842095 BC009015 NM_030666 M93056 AK298044 AK312973 AK223370 AK291327	-12461	-	TSC_hg19_v1_chr6_-_2840686 BT006928 AB590702	-13791	-	TSC_hg19_v1_chr6_-_2903544 BC002538 AB060690 L40378 AK314842 NM_004155	48965	-	AK098566 TSC_hg19_v1_chr6_-_2971511	116871	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	117268	-	AK304641|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK309765|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BT006928|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC002538|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AB060690|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##L40378|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK314842|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##NM_004155|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK098566|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6	0.783594	CTCF.p2:25:0.784
chr1	143943706	143943828	reg1027806.p1	5.455	+	AK307197 TSC_hg19_v1_chr1_-_143913122 AB096683 NM_207418	-30637	-	HQ258079 BC130376 BC130378 NM_001123068	-175903	-	BC071624 BC132962 AK097058 AK310056 TSC_hg19_v1_chr1_-_143744413 AK310186 AK309393	-199362	-	BC130376 BC130378 AB084917 NM_001135789 NM_001143883 NM_178230	420457	-	BC061517 BC073170 BC009950 BC094809 TSC_hg19_v1_chr1_-_144520932	577164	-	TSC_hg19_v1_chr1_-_144520998 BC063535 BC021732	577239	-	AK307197|FAM72D|728833|family with sequence similarity 72, member D##AB096683|FAM72D|728833|family with sequence similarity 72, member D##NM_207418|FAM72D|728833|family with sequence similarity 72, member D##HQ258079|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##NM_001123068|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC071624|FLJ39739|388685|uncharacterized FLJ39739##BC132962|LOC100286793|100286793|uncharacterized LOC100286793##AK097058|FLJ39739|388685|uncharacterized FLJ39739##AK310056|FLJ39739|388685|uncharacterized FLJ39739##AK310186|FLJ39739|388685|uncharacterized FLJ39739##AK309393|FLJ39739|388685|uncharacterized FLJ39739##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC061517|LOC728855|728855|uncharacterized LOC728855##BC073170|LOC728855|728855|uncharacterized LOC728855##BC009950|LOC728855|728855|uncharacterized LOC728855##BC094809|LOC728855|728855|uncharacterized LOC728855##BC063535|LOC728855|728855|uncharacterized LOC728855##BC021732|LOC728855|728855|uncharacterized LOC728855	0.08407	
chr11	8092097	8092220	reg1023540.p2	5.455	+	NM_003320 U82467	-31979	+	AK293528 TSC_hg19_v1_chr11_+_8040820	-51353	+	NM_003754 TSC_hg19_v1_chr11_+_8008883 AK095574 AK289637 AK297621 AK291354 AK293826 BC000490 U94855 BC073753 AB590115 BT006894 CR456959 CU674238 DQ890766	-83276	+	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	10641	+	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	98405	-	BC069752 BC069793 M26682 NM_002315	193194	-	NM_003320|TUB|7275|tubby homolog (mouse)##U82467|TUB|7275|tubby homolog (mouse)##AK293528|TUB|7275|tubby homolog (mouse)##NM_003754|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK095574|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK289637|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK297621|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK291354|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##AK293826|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##BC000490|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##U94855|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##BC073753|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##BT006894|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##CR456959|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##DQ890766|EIF3F|8665|eukaryotic translation initiation factor 3, subunit F##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)	0.010064	
chr1	25258880	25258987	reg1023944.p2	5.455	+	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-2147	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-2194	-	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	-2508	-	BC013362 AK310945 NM_001031680 AF022726	32609	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	300054	-	BC065040 TSC_hg19_v1_chr1_-_25573922	314990	-	AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63	0.131137	
chr1	62107498	62107641	reg1029103.p1	5.455	+	TSC_hg19_v1_chr1_+_61924622 AK096483	-182877	+	TSC_hg19_v1_chr1_+_61869699 AK024964	-237846	+	TSC_hg19_v1_chr1_+_61548292 AB037860 NM_001134673 NM_005595 AK299356 BC022264 CU692518 DQ893250 DQ896579	-559511	+	AK311444 AK311705 TSC_hg19_v1_chr1_-_62190802 CU688668	83202	-	TSC_hg19_v1_chr1_-_62190806 BC048995 BC029486	83250	-	AF353990 NM_032027	83525	-	AK096483|NFIA|4774|nuclear factor I/A##AK024964|NFIA|4774|nuclear factor I/A##AB037860|NFIA|4774|nuclear factor I/A##NM_001134673|NFIA|4774|nuclear factor I/A##NM_005595|NFIA|4774|nuclear factor I/A##AK299356|NFIA|4774|nuclear factor I/A##BC022264|NFIA|4774|nuclear factor I/A##DQ893250|NFIA|4774|nuclear factor I/A##DQ896579|NFIA|4774|nuclear factor I/A##AK311444|TM2D1|83941|TM2 domain containing 1##AK311705|TM2D1|83941|TM2 domain containing 1##BC048995|TM2D1|83941|TM2 domain containing 1##BC029486|TM2D1|83941|TM2 domain containing 1##AF353990|TM2D1|83941|TM2 domain containing 1##NM_032027|TM2D1|83941|TM2 domain containing 1	0.529561	CTCF.p2:20:0.530
chr20	61585758	61585938	reg1024361.p2	5.455	+	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-1723	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-1818	+	TSC_hg19_v1_chr20_+_61569501 NM_017896 BC032120 AK299509 AK000609	-16392	+	BC137288 BC137308 NM_080606	52538	-	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	261675	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	281493	+	AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##NM_017896|C20orf11|54994|chromosome 20 open reading frame 11##BC032120|C20orf11|54994|chromosome 20 open reading frame 11##AK299509|C20orf11|54994|chromosome 20 open reading frame 11##AK000609|C20orf11|54994|chromosome 20 open reading frame 11##BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7	0.112814	
chr2	195410816	195410965	reg1025800.p1	5.455	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-2351261	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	-2351576	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-2698919	-	BC029413 NM_001127257 CR749813	1110685	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	1111018	+	AB463018 AF327442 AK094515 NM_018897 AB023161	1522605	-	BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7	0.558864	CTCF.p2:-1:0.559
chr1	144146838	144146978	reg1025565.p1	5.454	+	AK307197 TSC_hg19_v1_chr1_-_143913122 AB096683 NM_207418	-233778	-	HQ258079 BC130376 BC130378 NM_001123068	-379044	-	BC071624 BC132962 AK097058 AK310056 TSC_hg19_v1_chr1_-_143744413 AK310186 AK309393	-402503	-	BC130376 BC130378 AB084917 NM_001135789 NM_001143883 NM_178230	217316	-	BC061517 BC073170 BC009950 BC094809 TSC_hg19_v1_chr1_-_144520932	374023	-	TSC_hg19_v1_chr1_-_144520998 BC063535 BC021732	374098	-	AK307197|FAM72D|728833|family with sequence similarity 72, member D##AB096683|FAM72D|728833|family with sequence similarity 72, member D##NM_207418|FAM72D|728833|family with sequence similarity 72, member D##HQ258079|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##NM_001123068|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC071624|FLJ39739|388685|uncharacterized FLJ39739##BC132962|LOC100286793|100286793|uncharacterized LOC100286793##AK097058|FLJ39739|388685|uncharacterized FLJ39739##AK310056|FLJ39739|388685|uncharacterized FLJ39739##AK310186|FLJ39739|388685|uncharacterized FLJ39739##AK309393|FLJ39739|388685|uncharacterized FLJ39739##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC061517|LOC728855|728855|uncharacterized LOC728855##BC073170|LOC728855|728855|uncharacterized LOC728855##BC009950|LOC728855|728855|uncharacterized LOC728855##BC094809|LOC728855|728855|uncharacterized LOC728855##BC063535|LOC728855|728855|uncharacterized LOC728855##BC021732|LOC728855|728855|uncharacterized LOC728855	0.701931	CTCF.p2:17:0.702
chr19	1088091	1088200	reg1022404.p2	5.454	+	TSC_hg19_v1_chr19_+_1071219 AK128097	-16923	+	TSC_hg19_v1_chr19_+_1067558 BC035564	-20573	+	AK304271 TSC_hg19_v1_chr19_+_1067315 AK304765 D86976	-20819	+	AB464042 TSC_hg19_v1_chr19_-_1095353 AK295975 BC004441 D38251 J04965 AK312625 BC034144	7198	-	AK122813 TSC_hg19_v1_chr19_-_1095375	7230	-	TSC_hg19_v1_chr19_-_1095383 NM_002695	7247	-	AK128097|HMHA1|23526|histocompatibility (minor) HA-1##BC035564|HMHA1|23526|histocompatibility (minor) HA-1##AK304271|HMHA1|23526|histocompatibility (minor) HA-1##AK304765|HMHA1|23526|histocompatibility (minor) HA-1##D86976|HMHA1|23526|histocompatibility (minor) HA-1##AK295975|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##BC004441|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##D38251|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##J04965|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##AK312625|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##BC034144|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##AK122813|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##NM_002695|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa	0.316695	CTCF.p2:-9:0.317
chr2	217908810	217908927	reg1030538.p1	5.454	+	BC029516 NM_003284	-184087	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-348608	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-349302	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	899913	-	AK001785 TSC_hg19_v1_chr2_-_218843551	934678	-	TSC_hg19_v1_chr2_-_218867719 AK309785	958855	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.958805	CTCF.p2:19:0.948
chr11	63674174	63674272	reg1023336.p2	5.453	+	NM_017490 AK290339 TSC_hg19_v1_chr11_+_63656059 X97630 AY562188	-18147	+	TSC_hg19_v1_chr11_+_63606599 AK307858	-67619	+	TSC_hg19_v1_chr11_+_63606564 AK225766	-67674	+	BC023587 NM_173587	10092	-	TSC_hg19_v1_chr11_-_63684632 AB593132	10416	-	TSC_hg19_v1_chr11_+_63706473 NM_024771 AK023910 AK300451 AK303557 JF263566 BC041617 BC052298	32261	+	NM_017490|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK290339|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##X97630|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AY562188|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK307858|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK225766|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##BC023587|RCOR2|283248|REST corepressor 2##NM_173587|RCOR2|283248|REST corepressor 2##AB593132|RCOR2|283248|REST corepressor 2##NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##JF263566|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	0.911263	CTCF.p2:31:0.911
chr1	226875329	226875436	reg1026934.p2	5.453	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-138765	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-138881	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-279579	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	51556	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	182898	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	252564	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.790023	CTCF.p2:21:0.790
chr7	80288928	80289041	reg1027117.p2	5.453	+	HM217020 HM217021 HM217022 HM217023 HM217024 HM217025 HM217026 AB590184 CU678951 DQ893062 DQ896314 TSC_hg19_v1_chr7_+_80276126	-12937	+	L06850 NM_001127443 NM_001127444	-13287	+	TSC_hg19_v1_chr7_+_80267983 M98398 M98399 M24795	-20981	+	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	259450	-	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	259690	-	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	1110390	-	HM217020|CD36|948|CD36 molecule (thrombospondin receptor)##HM217021|CD36|948|CD36 molecule (thrombospondin receptor)##HM217022|CD36|948|CD36 molecule (thrombospondin receptor)##HM217023|CD36|948|CD36 molecule (thrombospondin receptor)##HM217024|CD36|948|CD36 molecule (thrombospondin receptor)##HM217025|CD36|948|CD36 molecule (thrombospondin receptor)##HM217026|CD36|948|CD36 molecule (thrombospondin receptor)##DQ893062|CD36|948|CD36 molecule (thrombospondin receptor)##DQ896314|CD36|948|CD36 molecule (thrombospondin receptor)##L06850|CD36|948|CD36 molecule (thrombospondin receptor)##NM_001127443|CD36|948|CD36 molecule (thrombospondin receptor)##NM_001127444|CD36|948|CD36 molecule (thrombospondin receptor)##M98398|CD36|948|CD36 molecule (thrombospondin receptor)##M98399|CD36|948|CD36 molecule (thrombospondin receptor)##M24795|CD36|948|CD36 molecule (thrombospondin receptor)##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)	0.995176	CTCF.p2:-4:0.995
chr1	152850644	152850771	reg1029071.p1	5.452	+	DQ991251 NM_001128600	-35378	+	NM_178348	-50759	+	BC031811 NM_178349	-66261	+	AK312020 BC014593 NM_030663 BC016744 X89960	101	+	AK300492 AK301649 NM_005547	30323	+	NM_173080 BC112170 BC112172 BC069445 BC069549	92426	+	DQ991251|LCE6A|448835|late cornified envelope 6A##NM_001128600|LCE6A|448835|late cornified envelope 6A##NM_178348|LCE1A|353131|late cornified envelope 1A##BC031811|LCE1B|353132|late cornified envelope 1B##NM_178349|LCE1B|353132|late cornified envelope 1B##AK312020|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##BC014593|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##NM_030663|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##BC016744|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##X89960|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##AK300492|IVL|3713|involucrin##NM_005547|IVL|3713|involucrin##NM_173080|SPRR4|163778|small proline-rich protein 4##BC112170|SPRR4|163778|small proline-rich protein 4##BC112172|SPRR4|163778|small proline-rich protein 4##BC069445|SPRR4|163778|small proline-rich protein 4##BC069549|SPRR4|163778|small proline-rich protein 4	0.18172	
chr1	221916175	221916356	reg1022725.p4	5.452	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-779	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-835	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-857	-	AY358602 BC007638 BC016552 NM_024746	805169	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	846912	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	875135	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.109807	
chr8	54923093	54923256	reg1027797.p2	5.452	+	TSC_hg19_v1_chr8_+_54793579 AF060877 HQ257937 BC015614	-129612	+	TSC_hg19_v1_chr8_+_54793431 AK094503 BC063490 NM_003702 BC054867 BC018618 BC031328	-129722	+	AY046538 NM_170587 AF366054 AF366055 AF366056	-158761	+	BT019995 CR542221 AB464783 AK290454 TSC_hg19_v1_chr8_-_54934848 X62585 BC072460 X57198 AK026617 AK297957 BX538034 AK297729	11593	-	TSC_hg19_v1_chr8_-_54934851 M81601	11680	-	TSC_hg19_v1_chr8_-_54934990 NM_006756 NM_201437	11845	-	AF060877|RGS20|8601|regulator of G-protein signaling 20##HQ257937|RGS20|8601|regulator of G-protein signaling 20##BC015614|RGS20|8601|regulator of G-protein signaling 20##AK094503|RGS20|8601|regulator of G-protein signaling 20##BC063490|RGS20|8601|regulator of G-protein signaling 20##NM_003702|RGS20|8601|regulator of G-protein signaling 20##BC018618|RGS20|8601|regulator of G-protein signaling 20##BC031328|RGS20|8601|regulator of G-protein signaling 20##AY046538|RGS20|8601|regulator of G-protein signaling 20##NM_170587|RGS20|8601|regulator of G-protein signaling 20##AF366054|RGS20|8601|regulator of G-protein signaling 20##AF366055|RGS20|8601|regulator of G-protein signaling 20##AF366056|RGS20|8601|regulator of G-protein signaling 20##BT019995|TCEA1|6917|transcription elongation factor A (SII), 1##CR542221|TCEA1|6917|transcription elongation factor A (SII), 1##AK290454|TCEA1|6917|transcription elongation factor A (SII), 1##X62585|TCEA1|6917|transcription elongation factor A (SII), 1##BC072460|TCEA1|6917|transcription elongation factor A (SII), 1##X57198|TCEA1|6917|transcription elongation factor A (SII), 1##AK026617|TCEA1|6917|transcription elongation factor A (SII), 1##AK297957|TCEA1|6917|transcription elongation factor A (SII), 1##BX538034|TCEA1|6917|transcription elongation factor A (SII), 1##AK297729|TCEA1|6917|transcription elongation factor A (SII), 1##M81601|TCEA1|6917|transcription elongation factor A (SII), 1##NM_006756|TCEA1|6917|transcription elongation factor A (SII), 1##NM_201437|TCEA1|6917|transcription elongation factor A (SII), 1	0.0	
chr12	68768154	68768302	reg1026178.p1	5.451	+	TSC_hg19_v1_chr12_-_68726142 BC010622 AK297311 BC034945 BC022042 AF267851 BC028355 AK314461 NM_001205028 NM_001205029 NM_017440 NM_020128	-42122	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	-120924	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	-148676	-	TSC_hg19_v1_chr12_+_69004678 NM_001010942 NM_001251917 NM_001251918 NM_001251921 NM_001251922 NM_015646	236418	+	TSC_hg19_v1_chr12_+_69004704 AK312371 BC078173 AK316447 AJ420497 AK298818 AK316543	236467	+	AK301401 AK301428 TSC_hg19_v1_chr12_+_69004708	236480	+	BC010622|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK297311|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC034945|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC022042|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AF267851|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC028355|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK314461|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205028|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205029|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_017440|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_020128|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##NM_001010942|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251917|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251918|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251921|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251922|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_015646|RAP1B|5908|RAP1B, member of RAS oncogene family##AK312371|RAP1B|5908|RAP1B, member of RAS oncogene family##BC078173|RAP1B|5908|RAP1B, member of RAS oncogene family##AK316447|RAP1B|5908|RAP1B, member of RAS oncogene family##AJ420497|RAP1B|5908|RAP1B, member of RAS oncogene family##AK298818|RAP1B|5908|RAP1B, member of RAS oncogene family##AK316543|RAP1B|5908|RAP1B, member of RAS oncogene family##AK301401|RAP1B|5908|RAP1B, member of RAS oncogene family##AK301428|RAP1B|5908|RAP1B, member of RAS oncogene family	0.0	
chr1	59485971	59486102	reg1023724.p2	5.451	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-236301	-	TSC_hg19_v1_chr1_-_59248287 BC009874	-237671	-	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-320284	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	276576	+	NM_001244714 AK054842	289717	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	794616	+	BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##BC009874|JUN|3725|jun proto-oncogene##BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)	0.0	
chr6	129919649	129919765	reg1005118.p2	5.451	+	NM_000426 NM_001079823 Z26653	-715394	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-1078051	-	AK124031 NM_001164687	-1679949	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	111619	-	NM_001010876	262708	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	420018	+	NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	0.0	
chr1	20959807	20959925	reg1024306.p1	5.450	+	BC048284 NM_001785 AY634312 BC054036 TSC_hg19_v1_chr1_+_20915592 AJ000474 CU691080 S52873	-44334	+	AK126900 NM_207334 TSC_hg19_v1_chr1_+_20879013 BC142686	-80880	+	TSC_hg19_v1_chr1_-_20834623 AB097015 AL833889 AK293430 AK303820 AK022937 NM_024544	-125225	-	TSC_hg19_v1_chr1_+_20959970 AB053323 NM_032409 AF316873 BC028215 DQ891033 DQ893330 DQ894212 DQ896646 AB384405	131	+	AK093117 AX747934 TSC_hg19_v1_chr1_+_20964439	4560	+	TSC_hg19_v1_chr1_-_20987871 AB062391	28003	-	BC048284|CDA|978|cytidine deaminase##NM_001785|CDA|978|cytidine deaminase##AY634312|CDA|978|cytidine deaminase##BC054036|CDA|978|cytidine deaminase##AJ000474|CDA|978|cytidine deaminase##S52873|CDA|978|cytidine deaminase##AK126900|FAM43B|163933|family with sequence similarity 43, member B##NM_207334|FAM43B|163933|family with sequence similarity 43, member B##BC142686|FAM43B|163933|family with sequence similarity 43, member B##AB097015|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AL833889|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK293430|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK303820|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AK022937|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##NM_024544|MUL1|79594|mitochondrial E3 ubiquitin protein ligase 1##AB053323|PINK1|65018|PTEN induced putative kinase 1##NM_032409|PINK1|65018|PTEN induced putative kinase 1##AF316873|PINK1|65018|PTEN induced putative kinase 1##BC028215|PINK1|65018|PTEN induced putative kinase 1##DQ891033|PINK1|65018|PTEN induced putative kinase 1##DQ893330|PINK1|65018|PTEN induced putative kinase 1##DQ894212|PINK1|65018|PTEN induced putative kinase 1##DQ896646|PINK1|65018|PTEN induced putative kinase 1##AB062391|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase	0.0	
chr12	64630496	64630613	reg1024788.p1	5.450	+	BC071634 AK057111 BC036246 AK129933 NM_152440	-14501	-	TSC_hg19_v1_chr12_+_64238511 BC053903 NM_020762 BC029919	-392008	+	TSC_hg19_v1_chr12_+_64237847 BC065032	-392828	+	BC039369 NM_001099676 NM_001170633	153763	-	TSC_hg19_v1_chr12_+_64798240 NM_007235 AK308108 AK292884	167692	+	BC020569 Y16414 TSC_hg19_v1_chr12_+_64803772 AF039022	173224	+	BC071634|C12orf66|144577|chromosome 12 open reading frame 66##AK057111|C12orf66|144577|chromosome 12 open reading frame 66##BC036246|C12orf66|144577|chromosome 12 open reading frame 66##AK129933|C12orf66|144577|chromosome 12 open reading frame 66##NM_152440|C12orf66|144577|chromosome 12 open reading frame 66##BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC039369|C12orf56|115749|chromosome 12 open reading frame 56##NM_001099676|C12orf56|115749|chromosome 12 open reading frame 56##NM_001170633|C12orf56|115749|chromosome 12 open reading frame 56##NM_007235|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK308108|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK292884|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	0.0	
chr13	95948929	95949069	reg1025190.p2	5.450	+	X65666 X71136 AB464716 NM_007084	-584681	-	TSC_hg19_v1_chr13_+_95254110 NM_180989 BC033906 BC052243 AK126794	-694897	+	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	-700503	-	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	4713	-	NM_001160100 NM_182848 AK055855	136855	+	TSC_hg19_v1_chr13_+_96204946 NM_006984 BC010920 U89916 AK315737 DQ892831 DQ896077 CR456845	255975	+	X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##NM_180989|GPR180|160897|G protein-coupled receptor 180##BC033906|GPR180|160897|G protein-coupled receptor 180##BC052243|GPR180|160897|G protein-coupled receptor 180##AK126794|GPR180|160897|G protein-coupled receptor 180##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10##NM_006984|CLDN10|9071|claudin 10##BC010920|CLDN10|9071|claudin 10##U89916|CLDN10|9071|claudin 10##AK315737|CLDN10|9071|claudin 10##DQ892831|CLDN10|9071|claudin 10##DQ896077|CLDN10|9071|claudin 10##CR456845|CLDN10|9071|claudin 10	0.983491	CTCF.p2:0:0.983
chr16	50623060	50623240	reg1020966.p1	5.450	+	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	-40824	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	-220320	-	NM_001114 D25538	-301327	+	TSC_hg19_v1_chr16_-_50647562 AK124375	24428	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	92027	-	TSC_hg19_v1_chr16_-_50715246 NM_001144972 NM_153337 NM_182854	92151	-	BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20##NM_001144972|SNX20|124460|sorting nexin 20##NM_153337|SNX20|124460|sorting nexin 20##NM_182854|SNX20|124460|sorting nexin 20	0.0	
chr2	230645601	230645744	reg1023881.p1	5.450	+	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	-66424	-	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	-509667	-	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-1599310	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	140989	-	TSC_hg19_v1_chr2_-_230786712 AK310971	141077	-	TSC_hg19_v1_chr2_+_230787218 BC017869 BC022538 NM_174899 BC033935 AK289655 AK309702	141545	+	AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12##BC017869|FBXO36|130888|F-box protein 36##BC022538|FBXO36|130888|F-box protein 36##NM_174899|FBXO36|130888|F-box protein 36##BC033935|FBXO36|130888|F-box protein 36##AK289655|FBXO36|130888|F-box protein 36##AK309702|FBXO36|130888|F-box protein 36	0.988701	CTCF.p2:0:0.989
chr4	185251272	185251452	reg1019999.p2	5.450	+	BC035035 AY358676 AK057370 NM_153343	-112297	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-423451	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-423542	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	144319	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	319239	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	319471	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chrX	30990000	30990108	reg1025700.p1	5.450	+	TSC_hg19_v1_chrX_-_30907408 AK297274 NM_152787	-82595	-	TSC_hg19_v1_chrX_+_30671612 L13943 AK294938 AK294304 BX647604 AK308238 BC037549 CU688226 DQ891580 DQ894773	-318426	+	TSC_hg19_v1_chrX_+_30671539 AK313215	-318512	+	BC069538 BC100768 BC100769 BC100770 BC069069 AF285592 NM_031894	100109	-	CU688550 M92650 TSC_hg19_v1_chrX_-_31285072 BC070078 NM_004015 NM_004016 NM_004017 NM_004018 NM_004019 S42206 BC094758 AK299936 BC028720 S38776	294980	-	NM_004014 S62617	536360	-	AK297274|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##NM_152787|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##L13943|GK|2710|glycerol kinase##AK294938|GK|2710|glycerol kinase##AK294304|GK|2710|glycerol kinase##BX647604|GK|2710|glycerol kinase##AK308238|GK|2710|glycerol kinase##BC037549|GK|2710|glycerol kinase##DQ891580|GK|2710|glycerol kinase##DQ894773|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase##BC069538|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100768|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100769|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100770|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC069069|FTHL17|53940|ferritin, heavy polypeptide-like 17##AF285592|FTHL17|53940|ferritin, heavy polypeptide-like 17##NM_031894|FTHL17|53940|ferritin, heavy polypeptide-like 17##M92650|DMD|1756|dystrophin##BC070078|DMD|1756|dystrophin##NM_004015|DMD|1756|dystrophin##NM_004016|DMD|1756|dystrophin##NM_004017|DMD|1756|dystrophin##NM_004018|DMD|1756|dystrophin##NM_004019|DMD|1756|dystrophin##S42206|DMD|1756|dystrophin##BC094758|DMD|1756|dystrophin##AK299936|DMD|1756|dystrophin##BC028720|DMD|1756|dystrophin##S38776|DMD|1756|dystrophin##NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin	0.984663	CTCF.p2:-4:0.985
chr16	77633857	77633967	reg1027084.p2	5.449	+	AK293831 BC063283 NM_199355	-164942	-	NM_001129979 TSC_hg19_v1_chr16_+_77233375	-400551	+	AF442486 AB463127 TSC_hg19_v1_chr16_+_77225481	-408487	+	NM_001105663 NM_001243657 NM_001243660 NM_001243661 TSC_hg19_v1_chr16_+_77756410 AK296963 EU981826	122521	+	TSC_hg19_v1_chr16_+_77822482 AK290153 BC033537 NM_020927 AB046796 CU689646	188577	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	422538	+	AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like##AF442486|MON1B|22879|MON1 homolog B (yeast)##NM_001105663|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243657|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243660|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243661|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK296963|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##EU981826|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK290153|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##BC033537|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_020927|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AB046796|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A	0.980508	CTCF.p2:-8:0.981
chr16	19222046	19222174	reg1027913.p1	5.448	+	TSC_hg19_v1_chr16_+_19179561 NM_016524 BC004518 AF220560 AB527504 CU678742	-42359	+	TSC_hg19_v1_chr16_+_19125253 AK096327 NM_001034841	-96862	+	TSC_hg19_v1_chr16_+_19079232 AL136647 NM_001190983 BC043272	-142845	+	BC070101 NM_001105248 NM_001105249	199946	+	AY236494 NM_024780 BC038118 AK097718 BC027602 AK131202	245694	+	AY463154 BC014981 TSC_hg19_v1_chr16_-_19533421 AF306698 BC025273 BC001538 AF212862 BC012153 AK312912 NM_016641	311266	-	NM_016524|SYT17|51760|synaptotagmin XVII##BC004518|SYT17|51760|synaptotagmin XVII##AF220560|SYT17|51760|synaptotagmin XVII##AK096327|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##NM_001034841|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##AL136647|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_001190983|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC043272|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC070101|TMC5|79838|transmembrane channel-like 5##NM_001105248|TMC5|79838|transmembrane channel-like 5##NM_001105249|TMC5|79838|transmembrane channel-like 5##AY236494|TMC5|79838|transmembrane channel-like 5##NM_024780|TMC5|79838|transmembrane channel-like 5##BC038118|TMC5|79838|transmembrane channel-like 5##AK097718|TMC5|79838|transmembrane channel-like 5##BC027602|TMC5|79838|transmembrane channel-like 5##AK131202|TMC5|79838|transmembrane channel-like 5##AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1##NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1	0.0	
chr17	40976321	40976454	reg1022249.p2	5.448	+	TSC_hg19_v1_chr17_-_40976300 AK223411 AK312651 BC010276 AF139131 BX647788 AK298619 AK299616 NM_003766	-88	-	BC026187 NM_173478 AK302094 AK097456 CU693154	-25440	+	TSC_hg19_v1_chr17_-_40950712 DQ893448 EU176748 BC002698 NM_001040431 AK295023 AK290863 AF070665 AK225611	-25683	-	TSC_hg19_v1_chr17_+_40985415 AK314347	9026	+	TSC_hg19_v1_chr17_+_40985422 NM_005789 NM_176863	9032	+	TSC_hg19_v1_chr17_+_40985425 AK307110 BC001423	9042	+	AK223411|BECN1|8678|beclin 1, autophagy related##AK312651|BECN1|8678|beclin 1, autophagy related##BC010276|BECN1|8678|beclin 1, autophagy related##AF139131|BECN1|8678|beclin 1, autophagy related##BX647788|BECN1|8678|beclin 1, autophagy related##AK298619|BECN1|8678|beclin 1, autophagy related##AK299616|BECN1|8678|beclin 1, autophagy related##NM_003766|BECN1|8678|beclin 1, autophagy related##BC026187|CNTD1|124817|cyclin N-terminal domain containing 1##NM_173478|CNTD1|124817|cyclin N-terminal domain containing 1##AK302094|CNTD1|124817|cyclin N-terminal domain containing 1##AK097456|CNTD1|124817|cyclin N-terminal domain containing 1##DQ893448|CCDC56|28958|coiled-coil domain containing 56##EU176748|CCDC56|28958|coiled-coil domain containing 56##BC002698|CCDC56|28958|coiled-coil domain containing 56##NM_001040431|CCDC56|28958|coiled-coil domain containing 56##AK295023|CCDC56|28958|coiled-coil domain containing 56##AK290863|CCDC56|28958|coiled-coil domain containing 56##AF070665|CCDC56|28958|coiled-coil domain containing 56##AK225611|CCDC56|28958|coiled-coil domain containing 56##AK314347|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##NM_005789|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##NM_176863|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##AK307110|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##BC001423|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)	0.051895	
chr20	18393961	18394085	reg1025560.p2	5.448	+	BC001887 NM_001083330 NM_003434 TSC_hg19_v1_chr20_+_18269170 AK295273 AK295513 AK291389 AK316386 AK294263 AK313525	-124856	+	NM_020536 BC007537	-271108	+	TSC_hg19_v1_chr20_+_18118516 NM_001164811 AY358666	-275491	+	TSC_hg19_v1_chr20_-_18447678 CR749327 BC036231 BC130341 BC144153 AK295073 AK055544 AK299746 NM_001099407	53702	-	TSC_hg19_v1_chr20_+_18448037 BC012588 BC016761 NM_006466 AK314838 AK096684 AK223298 AK290892 U93869 AB464048 DQ892695 DQ896169	54066	+	AB464147 EU446767 AL832411 AF237576 BC020627 BC015938 NM_006606	83825	-	BC001887|ZNF133|7692|zinc finger protein 133##NM_001083330|ZNF133|7692|zinc finger protein 133##NM_003434|ZNF133|7692|zinc finger protein 133##AK295273|ZNF133|7692|zinc finger protein 133##AK295513|ZNF133|7692|zinc finger protein 133##AK291389|ZNF133|7692|zinc finger protein 133##AK316386|ZNF133|7692|zinc finger protein 133##AK294263|ZNF133|7692|zinc finger protein 133##AK313525|ZNF133|7692|zinc finger protein 133##NM_020536|CSRP2BP|57325|CSRP2 binding protein##BC007537|CSRP2BP|57325|CSRP2 binding protein##NM_001164811|PET117|100303755|cytochrome c oxidase assembly factor-like##AY358666|PET117|100303755|cytochrome c oxidase assembly factor-like##CR749327|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC036231|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC130341|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC144153|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK295073|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK055544|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK299746|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##NM_001099407|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC012588|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##BC016761|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##NM_006466|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK314838|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK096684|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK223298|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK290892|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##U93869|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##DQ892695|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##DQ896169|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##EU446767|RBBP9|10741|retinoblastoma binding protein 9##AL832411|RBBP9|10741|retinoblastoma binding protein 9##AF237576|RBBP9|10741|retinoblastoma binding protein 9##BC020627|RBBP9|10741|retinoblastoma binding protein 9##BC015938|RBBP9|10741|retinoblastoma binding protein 9##NM_006606|RBBP9|10741|retinoblastoma binding protein 9	0.927029	CTCF.p2:4:0.927
chr8	126243032	126243162	reg1026665.p1	5.448	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-139000	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-139040	-	TSC_hg19_v1_chr8_-_126104024 AK296970	-139075	-	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	199482	+	TSC_hg19_v1_chr8_-_126963395 BX648371	720316	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	1327458	-	NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##AK296970|KIAA0196|9897|KIAA0196##BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B	0.997815	CTCF.p2:0:0.998
chr11	77487675	77487793	reg1022569.p1	5.447	+	AB590787 AF026003 BT019907 AF005422 BC119634 BC119635 TSC_hg19_v1_chr11_-_77348840 U53454 AK315259 X91788 NM_001293	-138920	-	BC040443 NM_173039 TSC_hg19_v1_chr11_+_77300718 AB028147	-187034	+	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	-302902	-	AF380176 AB527448 TSC_hg19_v1_chr11_-_77531769 BC015360 NM_016578 AK098130	44098	-	TSC_hg19_v1_chr11_+_77532238 AF092136 AK024688 BC002752 NM_024684	44469	+	AL834171 EU446555 TSC_hg19_v1_chr11_-_77705710 CU679559 AK000455 BC018672	217950	-	AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC040443|AQP11|282679|aquaporin 11##NM_173039|AQP11|282679|aquaporin 11##AB028147|AQP11|282679|aquaporin 11##U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AF380176|RSF1|51773|remodeling and spacing factor 1##BC015360|RSF1|51773|remodeling and spacing factor 1##NM_016578|RSF1|51773|remodeling and spacing factor 1##AF092136|C11orf67|28971|chromosome 11 open reading frame 67##AK024688|C11orf67|28971|chromosome 11 open reading frame 67##BC002752|C11orf67|28971|chromosome 11 open reading frame 67##NM_024684|C11orf67|28971|chromosome 11 open reading frame 67##AL834171|INTS4|92105|integrator complex subunit 4##EU446555|INTS4|92105|integrator complex subunit 4##AK000455|INTS4|92105|integrator complex subunit 4##BC018672|INTS4|92105|integrator complex subunit 4	0.939996	CTCF.p2:-44:0.940
chr12	91353485	91353591	reg1026235.p1	5.447	+	BC026075 BC024183 BC027600 BC034491 NM_152638	-4587	-	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-1249993	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-1250851	+	U59111 TSC_hg19_v1_chr12_-_91398750	45209	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	45241	-	NM_007035	98592	-	BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan##NM_007035|KERA|11081|keratocan	0.98519	CTCF.p2:-10:0.985
chr19	2611105	2611233	reg1003485.p1	5.447	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-134931	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-154209	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-154233	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	91526	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	91573	-	AK124445 TSC_hg19_v1_chr19_-_2717420	106180	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr2	183514145	183514257	reg1026399.p2	5.446	+	AK295657 AB384753 DQ892369 DQ893372 DQ895578 DQ896694 AF110237 NM_005019 BC022480 AF110240 AF110236 NM_001003683 U40370 AK294239	-126917	-	NM_001080545 AK129898 AF494535 BX647581 BC017943	-663552	+	TSC_hg19_v1_chr2_+_182756689 BC052581 BC064499 BC028706 AK291745 BX647257 AB116937 AB385517 BX647967 AK304238 BX648888	-757408	+	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	66873	+	TSC_hg19_v1_chr2_+_183582683 BC107425 AF314529 AY089971 HQ258514 HQ258651 AL832646 AK027450	68546	+	TSC_hg19_v1_chr2_+_183608333 AK074905	94149	+	AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC052581|SSFA2|6744|sperm specific antigen 2##BC064499|SSFA2|6744|sperm specific antigen 2##BC028706|SSFA2|6744|sperm specific antigen 2##AK291745|SSFA2|6744|sperm specific antigen 2##BX647257|SSFA2|6744|sperm specific antigen 2##AB116937|SSFA2|6744|sperm specific antigen 2##BX647967|SSFA2|6744|sperm specific antigen 2##AK304238|SSFA2|6744|sperm specific antigen 2##BX648888|SSFA2|6744|sperm specific antigen 2##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC107425|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF314529|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY089971|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258514|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258651|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832646|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027450|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK074905|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	0.321737	CTCF.p2:10:0.322
chr5	133115608	133115736	reg1027518.p1	5.446	+	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	-167434	-	TSC_hg19_v1_chr5_-_132948202 AK055684	-167473	-	TSC_hg19_v1_chr5_+_132432890 AK315862	-682781	+	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	188703	-	TSC_hg19_v1_chr5_-_133340377 BC008482	224695	-	TSC_hg19_v1_chr5_-_133340386 BC090042	224711	-	NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##AK055684|FSTL4|23105|follistatin-like 4##AK315862|HSPA4|3308|heat shock 70kDa protein 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15##BC008482|VDAC1|7416|voltage-dependent anion channel 1##BC090042|VDAC1|7416|voltage-dependent anion channel 1	0.01214	
chr5	16456443	16456589	reg1024970.p1	5.446	+	NM_001102562	-276620	-	TSC_hg19_v1_chr5_+_15500770 AF199356 AB463041	-955740	+	BC075061 TSC_hg19_v1_chr5_+_15500760	-955768	+	TSC_hg19_v1_chr5_-_16465884 BC010545 BC008752 NM_033414 AY046059	9360	-	NM_019000	52590	-	TSC_hg19_v1_chr5_-_16617097 BC053326 AK025808 NM_001034850	160609	-	NM_001102562|MARCH11|441061|membrane-associated ring finger (C3HC4) 11##AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC010545|ZNF622|90441|zinc finger protein 622##BC008752|ZNF622|90441|zinc finger protein 622##NM_033414|ZNF622|90441|zinc finger protein 622##AY046059|ZNF622|90441|zinc finger protein 622##NM_019000|FAM134B|54463|family with sequence similarity 134, member B##BC053326|FAM134B|54463|family with sequence similarity 134, member B##AK025808|FAM134B|54463|family with sequence similarity 134, member B##NM_001034850|FAM134B|54463|family with sequence similarity 134, member B	0.999071	CTCF.p2:12:0.999
chr5	32942669	32942780	reg1026998.p2	5.446	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	-230919	+	AK290870 NM_000908 NM_001204375 M59305	-231236	+	NM_001204376 AK300094 AK308301	-231974	+	AK292346 TSC_hg19_v1_chr5_+_33440874 NM_152295	498132	+	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	498415	+	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	949321	-	BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK292346|TARS|6897|threonyl-tRNA synthetase##NM_152295|TARS|6897|threonyl-tRNA synthetase##AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	0.022991	
chr9	127209299	127209385	reg1019024.p1	5.446	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	-31622	-	TSC_hg19_v1_chr9_+_127119114 BC042968	-90173	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	-154710	+	AY278562 NM_001161808	4080	+	TSC_hg19_v1_chr9_-_127269711 BC032501 NM_004959	60362	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	211362	+	BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144##BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)	0.900452	CTCF.p2:-31:0.900
chr10	121981485	121981606	reg1024722.p1	5.445	+	NM_007190 TSC_hg19_v1_chr10_+_121652241 AB019435 AK021846 AK314592 AK001135 AK001135 AK301517 BC063800 BC063800 BC002540 AF116723 BX649119 BX649119 AB384691 CU687818 BT006755	-329356	+	AK023143 TSC_hg19_v1_chr10_-_121632359 BC004183 BC007219 NM_024834	-349205	-	TSC_hg19_v1_chr10_-_121602031 BC000935	-379482	-	NM_001030059 TSC_hg19_v1_chr10_+_122216486 BC101267 BC101268 BC101269 BC122535 BC132787 AK296273 HQ258170 AK310178	235094	+	NM_018117 TSC_hg19_v1_chr10_+_122610771	629183	+	TSC_hg19_v1_chr10_+_122610873 BC040469 AB037772 AK299524 AF320223 AK301761 BC071564 AK315145 AB385454	629350	+	NM_007190|SEC23IP|11196|SEC23 interacting protein##AB019435|SEC23IP|11196|SEC23 interacting protein##AK021846|SEC23IP|11196|SEC23 interacting protein##AK314592|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK301517|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC002540|SEC23IP|11196|SEC23 interacting protein##AF116723|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BT006755|SEC23IP|11196|SEC23 interacting protein##AK023143|MCMBP|79892|minichromosome maintenance complex binding protein##BC004183|MCMBP|79892|minichromosome maintenance complex binding protein##BC007219|MCMBP|79892|minichromosome maintenance complex binding protein##NM_024834|MCMBP|79892|minichromosome maintenance complex binding protein##BC000935|MCMBP|79892|minichromosome maintenance complex binding protein##NM_001030059|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101267|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101268|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101269|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC122535|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC132787|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##HQ258170|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AK310178|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##NM_018117|WDR11|55717|WD repeat domain 11##BC040469|WDR11|55717|WD repeat domain 11##AB037772|WDR11|55717|WD repeat domain 11##AK299524|WDR11|55717|WD repeat domain 11##AF320223|WDR11|55717|WD repeat domain 11##AK301761|WDR11|55717|WD repeat domain 11##BC071564|WDR11|55717|WD repeat domain 11##AK315145|WDR11|55717|WD repeat domain 11	0.995347	CTCF.p2:4:0.995
chr12	68507568	68507675	reg1025920.p2	5.445	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	-464998	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-844191	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-844449	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	45801	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	111931	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	139683	-	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22	0.735805	CTCF.p2:1:0.633
chr17	41150085	41150224	reg1023940.p1	5.445	+	BC014873 TSC_hg19_v1_chr17_+_41132589 AK303115 AL831813 AY189284	-17560	+	AK310125 BC039247 NM_173079 TSC_hg19_v1_chr17_+_41132581	-17573	+	AK295447 NM_001136042 NM_001142653 NM_001142654	-17610	-	TSC_hg19_v1_chr17_+_41150435 AK124148 NM_000988 BC098560 AK311792	277	+	BC002588 TSC_hg19_v1_chr17_+_41150484	326	+	NM_005533 TSC_hg19_v1_chr17_+_41158831 BC001356 AB463796 DQ892598 DQ895826 U72882	8698	+	BC014873|RUNDC1|146923|RUN domain containing 1##AL831813|RUNDC1|146923|RUN domain containing 1##AY189284|RUNDC1|146923|RUN domain containing 1##BC039247|RUNDC1|146923|RUN domain containing 1##NM_173079|RUNDC1|146923|RUN domain containing 1##AK295447|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##NM_001136042|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##NM_001142653|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##NM_001142654|AARSD1|80755|alanyl-tRNA synthetase domain containing 1##AK124148|RPL27|6155|ribosomal protein L27##NM_000988|RPL27|6155|ribosomal protein L27##BC098560|RPL27|6155|ribosomal protein L27##AK311792|RPL27|6155|ribosomal protein L27##BC002588|RPL27|6155|ribosomal protein L27##NM_005533|IFI35|3430|interferon-induced protein 35##BC001356|IFI35|3430|interferon-induced protein 35##DQ892598|IFI35|3430|interferon-induced protein 35##DQ895826|IFI35|3430|interferon-induced protein 35##U72882|IFI35|3430|interferon-induced protein 35	0.0738	
chr22	21984398	21984505	reg1025225.p3	5.445	+	TSC_hg19_v1_chr22_-_21984367 BC133043 BC133047	-51	-	TSC_hg19_v1_chr22_-_21984304 BC064568 BC053663 BC017281 BC110075 BC110799 BC057814 NM_001017964 BC096754	-136	-	TSC_hg19_v1_chr22_+_21922030 AB528270 CU013202 CU013490 X92962	-62408	+	TSC_hg19_v1_chr22_+_21987057 AK302030 AK093365 AX748079 BC033499 NM_152612	2575	+	NM_022044 BC132849 BC132851 TSC_hg19_v1_chr22_+_21996560	12102	+	TSC_hg19_v1_chr22_+_21996575 AY359118	12123	+	BC133043|YDJC|150223|YdjC homolog (bacterial)##BC133047|YDJC|150223|YdjC homolog (bacterial)##BC064568|YDJC|150223|YdjC homolog (bacterial)##BC053663|YDJC|150223|YdjC homolog (bacterial)##BC017281|YDJC|150223|YdjC homolog (bacterial)##BC110075|YDJC|150223|YdjC homolog (bacterial)##BC110799|YDJC|150223|YdjC homolog (bacterial)##BC057814|YDJC|150223|YdjC homolog (bacterial)##NM_001017964|YDJC|150223|YdjC homolog (bacterial)##BC096754|YDJC|150223|YdjC homolog (bacterial)##CU013202|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##CU013490|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##X92962|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK302030|CCDC116|164592|coiled-coil domain containing 116##AK093365|CCDC116|164592|coiled-coil domain containing 116##BC033499|CCDC116|164592|coiled-coil domain containing 116##NM_152612|CCDC116|164592|coiled-coil domain containing 116##NM_022044|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC132849|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC132851|SDF2L1|23753|stromal cell-derived factor 2-like 1##AY359118|SDF2L1|23753|stromal cell-derived factor 2-like 1	0.603072	CTCF.p2:-12:0.603
chr3	186647960	186648128	reg1026356.p1	5.445	+	BC096308 BC096309 BC096310 BC096311 TSC_hg19_v1_chr3_+_186560498 AK291525 AK312868 AX767959 D45371 BC054496	-87545	+	NM_001177800 NM_004797 TSC_hg19_v1_chr3_+_186560467 AL832470	-87578	+	NM_181573	-123561	-	TSC_hg19_v1_chr3_+_186648314 NM_173216 NM_173217	265	+	X17247 TSC_hg19_v1_chr3_+_186648632	533	+	U67847 TSC_hg19_v1_chr3_+_186714361	66304	+	BC096308|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096309|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096310|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC096311|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AK291525|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AK312868|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AX767959|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##D45371|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##BC054496|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##NM_001177800|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##NM_004797|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##AL832470|ADIPOQ|9370|adiponectin, C1Q and collagen domain containing##NM_181573|RFC4|5984|replication factor C (activator 1) 4, 37kDa##NM_173216|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_173217|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X17247|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1	0.140609	
chr4	112981463	112981613	reg1025658.p1	5.445	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1418260	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1423369	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-1437263	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	85076	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	171546	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	225463	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.79863	CTCF.p2:25:0.799
chr9	130046388	130046485	reg1027052.p2	5.445	+	NM_032293 AK293732 AK095679	-19629	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-161406	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-161474	-	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	113010	+	TSC_hg19_v1_chr9_-_130186602 AK124330	140130	-	NM_007135 TSC_hg19_v1_chr9_+_130186700 AK054606 BC062309 AK302284	140245	+	NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_007135|ZNF79|7633|zinc finger protein 79##AK054606|ZNF79|7633|zinc finger protein 79##BC062309|ZNF79|7633|zinc finger protein 79##AK302284|ZNF79|7633|zinc finger protein 79	0.0	
chr10	125947896	125947999	reg1025383.p1	5.444	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	-94794	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-96048	-	BC137492 BC146862 AY358565 NM_198148	-296451	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	159526	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	159571	-	NM_001146340 TSC_hg19_v1_chr10_-_126138606	190630	-	BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##NM_001146340|NKX1-2|390010|NK1 homeobox 2	0.996822	CTCF.p2:-2:0.997
chr13	48172581	48172678	reg1024483.p1	5.444	+	AK314132 BX647777 AK302787 NM_000621 NM_001165947	-701562	-	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	-801314	-	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-1045122	+	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	402822	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	439185	+	TSC_hg19_v1_chr13_-_48612129 AK316271	439479	-	AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##AK316271|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.900654	CTCF.p2:20:0.901
chr14	105669237	105669339	reg1001545.p1	5.444	+	TSC_hg19_v1_chr14_-_105647650 AB087802 HQ257983 BC041584 AK128196 AK310449 NM_177533	-21694	-	TSC_hg19_v1_chr14_-_105635114 AF029778 AF029779 NM_002226 NM_145159	-34151	-	Y14330 AF003521 AF020201 TSC_hg19_v1_chr14_-_105634835 BC032053	-34497	-	AJ297407 NM_145685	44933	-	TSC_hg19_v1_chr14_+_105714874 NM_033271	45577	+	TSC_hg19_v1_chr14_+_105714895 BC042525	45661	+	AB087802|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##HQ257983|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##BC041584|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AK128196|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##NM_177533|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AF029778|JAG2|3714|jagged 2##AF029779|JAG2|3714|jagged 2##NM_002226|JAG2|3714|jagged 2##NM_145159|JAG2|3714|jagged 2##Y14330|JAG2|3714|jagged 2##AF003521|JAG2|3714|jagged 2##AF020201|JAG2|3714|jagged 2##BC032053|JAG2|3714|jagged 2##AJ297407|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_145685|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_033271|BTBD6|90135|BTB (POZ) domain containing 6##BC042525|BTBD6|90135|BTB (POZ) domain containing 6	0.0	
chr19	54533297	54533396	reg1026166.p1	5.444	+	AF288386 AF361352 DQ895210 EU176325 EU176667 TSC_hg19_v1_chr19_+_54496186	-37253	+	BC021552 NM_031897 NM_145814 NM_145815	-37805	+	AF361354 NM_031895 AF288388	-66987	+	FN398145 FJ584316 FJ584317 FJ584318 FJ584319 FJ584320 FJ882051 DQ479397 BC100942 BC100943 AX721201 AY358542 NM_198481	33774	-	DQ479398 NM_001135686	51287	-	TSC_hg19_v1_chr19_-_54604114 AF391163 AF474153 DQ893697 DQ894733 AF391162 AK091111 AX746784 AK311307 AK130199 AF391164 AF474152 AF251702 NM_130771 NM_133168 NM_133169 NM_206818	70773	-	AF288386|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##AF361352|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##DQ895210|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##EU176325|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##EU176667|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##BC021552|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##NM_031897|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##NM_145814|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##NM_145815|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##AF361354|CACNG8|59283|calcium channel, voltage-dependent, gamma subunit 8##NM_031895|CACNG8|59283|calcium channel, voltage-dependent, gamma subunit 8##AF288388|CACNG8|59283|calcium channel, voltage-dependent, gamma subunit 8##FN398145|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584316|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584317|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584318|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584319|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584320|VSTM1|284415|V-set and transmembrane domain containing 1##FJ882051|VSTM1|284415|V-set and transmembrane domain containing 1##DQ479397|VSTM1|284415|V-set and transmembrane domain containing 1##BC100942|VSTM1|284415|V-set and transmembrane domain containing 1##BC100943|VSTM1|284415|V-set and transmembrane domain containing 1##AY358542|VSTM1|284415|V-set and transmembrane domain containing 1##NM_198481|VSTM1|284415|V-set and transmembrane domain containing 1##DQ479398|TARM1|441864|T cell-interacting, activating receptor on myeloid cells 1##NM_001135686|TARM1|441864|T cell-interacting, activating receptor on myeloid cells 1##AF391163|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF474153|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##DQ893697|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##DQ894733|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF391162|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK091111|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK311307|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK130199|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF391164|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF474152|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF251702|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_130771|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_133168|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_133169|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_206818|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor	0.992718	CTCF.p2:-15:0.993
chr16	28148471	28148621	reg1025433.p2	5.443	+	TSC_hg19_v1_chr16_-_28074776 AY358206 NM_001109763	-73744	-	BC016460 NM_144675	-249069	-	TSC_hg19_v1_chr16_+_27561464 NM_015202 AB011128 BC150276 BC131508	-587082	+	AY026388 BC130304 BC144189 TSC_hg19_v1_chr16_-_28222816 AK123846	74239	-	TSC_hg19_v1_chr16_-_28223181 AB002368 NM_015171	74629	-	TSC_hg19_v1_chr16_-_28303389 AK091456 AX746995	154832	-	AY358206|GSG1L|146395|GSG1-like##NM_001109763|GSG1L|146395|GSG1-like##BC016460|GSG1L|146395|GSG1-like##NM_144675|GSG1L|146395|GSG1-like##NM_015202|KIAA0556|23247|KIAA0556##AB011128|KIAA0556|23247|KIAA0556##BC150276|KIAA0556|23247|KIAA0556##BC131508|KIAA0556|23247|KIAA0556##AY026388|XPO6|23214|exportin 6##BC130304|XPO6|23214|exportin 6##BC144189|XPO6|23214|exportin 6##AK123846|XPO6|23214|exportin 6##AB002368|XPO6|23214|exportin 6##NM_015171|XPO6|23214|exportin 6	0.0	
chr16	62112012	62112126	reg1023734.p1	5.443	+	AK124734 NM_001796	-41331	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-3343872	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-3393413	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	3043833	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	3043899	-	TSC_hg19_v1_chr16_-_65155987 AK297377	3043925	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.838327	CTCF.p2:32:0.790
chr20	54824511	54824619	reg1021426.p1	5.443	+	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	-778	+	NM_080617	-244554	-	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-1732351	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	109459	+	BC002499 TSC_hg19_v1_chr20_-_54967272 BC006423 AF011468 BC001280 D84212 AK312776 BC027464 AK301769 NM_003600 NM_198433 NM_198434 NM_198435 NM_198436 NM_198437	142720	-	TSC_hg19_v1_chr20_+_54967443 NM_001033521 AK307144	142859	+	BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B##BC002499|AURKA|6790|aurora kinase A##BC006423|AURKA|6790|aurora kinase A##AF011468|AURKA|6790|aurora kinase A##BC001280|AURKA|6790|aurora kinase A##D84212|AURKA|6790|aurora kinase A##AK312776|AURKA|6790|aurora kinase A##BC027464|AURKA|6790|aurora kinase A##AK301769|AURKA|6790|aurora kinase A##NM_003600|AURKA|6790|aurora kinase A##NM_198433|AURKA|6790|aurora kinase A##NM_198434|AURKA|6790|aurora kinase A##NM_198435|AURKA|6790|aurora kinase A##NM_198436|AURKA|6790|aurora kinase A##NM_198437|AURKA|6790|aurora kinase A##NM_001033521|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa	0.83348	CTCF.p2:12:0.817
chr22	43216331	43216427	reg1020496.p2	5.443	+	TSC_hg19_v1_chr22_-_43117270 AK312927	-99102	-	TSC_hg19_v1_chr22_-_43116877 BC017068 GU902275 GU902276 GU902277 GU902278 GU902279 GU902280 GU902281 AK130208 NM_017436	-99524	-	AK074388 TSC_hg19_v1_chr22_-_43089917 AJ245581 CU677819 AB590407 DQ891619 DQ894811	-126472	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	36832	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	36891	-	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	36976	-	AK312927|A4GALT|53947|alpha 1,4-galactosyltransferase##BC017068|A4GALT|53947|alpha 1,4-galactosyltransferase##NM_017436|A4GALT|53947|alpha 1,4-galactosyltransferase##AK074388|A4GALT|53947|alpha 1,4-galactosyltransferase##AJ245581|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ891619|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ894811|A4GALT|53947|alpha 1,4-galactosyltransferase##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3	0.0	
chr4	26585547	26585682	reg1025437.p1	5.443	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-93629	-	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	-262932	+	TSC_hg19_v1_chr4_+_26322635 AK302230	-262978	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	66	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	276926	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	4136385	+	AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7	0.0	
chr14	78271053	78271172	reg1026060.p1	5.442	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-4662	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-43603	-	NM_001173978 NM_174943 BC107147 BC113929 BC113986	-43868	+	AB018286 BC152457 NM_004796	598980	+	NM_001105250 NM_138970 AK056530 BC059368 BC068469	1474592	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	2406792	-	NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001173978|C14orf178|283579|chromosome 14 open reading frame 178##NM_174943|C14orf178|283579|chromosome 14 open reading frame 178##BC107147|C14orf178|283579|chromosome 14 open reading frame 178##BC113929|C14orf178|283579|chromosome 14 open reading frame 178##BC113986|C14orf178|283579|chromosome 14 open reading frame 178##AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II	0.0	
chr18	36125176	36125288	reg1025953.p2	5.442	+	NM_001025087 NM_001025088 NM_001025089 NM_020180	-979233	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	-979536	-	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-1716112	-	TSC_hg19_v1_chr18_-_36915657 D28405	790424	-	TSC_hg19_v1_chr18_-_37380279 AK090603	1255036	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	3409967	+	NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK090603|LOC647946|647946|uncharacterized LOC647946##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3	0.104519	
chr2	56237051	56237158	reg1024984.p2	5.442	+	AK293058 NM_001039348 NM_001039349	-85819	-	TSC_hg19_v1_chr2_-_56150918 AK301531 BC014410 BC098561 AK301402 AK312639 AK092854 AK290599 AX747769	-86189	-	TSC_hg19_v1_chr2_-_55920980 BC053660 BC009057 AK027437 AY027528 AK307589 AJ458465 NM_033109	-316126	-	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	174101	+	AB384323 TSC_hg19_v1_chr2_+_56411776	174662	+	AK311113 TSC_hg19_v1_chr2_-_56412914	175805	-	AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301531|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC014410|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC098561|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301402|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK312639|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK092854|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK290599|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC053660|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##BC009057|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AY027528|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AK307589|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AJ458465|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##NM_033109|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK311113|LOC100129434|100129434|uncharacterized LOC100129434	0.643674	CTCF.p2:-6:0.644
chr5	142784221	142784368	reg1010376.p3	5.442	+	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-128	-	TSC_hg19_v1_chr5_-_142784036 AK302050 NM_001018076	-262	-	TSC_hg19_v1_chr5_-_142783310 AJ888004	-927	-	NM_001018074 NM_001018075 NM_001018077	30782	-	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	407464	+	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	765841	-	BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ888004|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5	0.132252	
chrX	109411231	109411372	reg1029420.p1	5.442	+	TSC_hg19_v1_chrX_+_109246360 BC085605	-164946	+	TSC_hg19_v1_chrX_+_109246341 NM_032227 AK026332	-164961	+	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	-165431	+	CU687440 TSC_hg19_v1_chrX_-_109561311 AK314596 BC060813	150004	-	TSC_hg19_v1_chrX_-_109561314 BX648797 NM_001025580 NM_015365	150045	-	TSC_hg19_v1_chrX_-_109561428 AJ007014	150145	-	BC085605|TMEM164|84187|transmembrane protein 164##NM_032227|TMEM164|84187|transmembrane protein 164##AK026332|TMEM164|84187|transmembrane protein 164##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164##AK314596|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC060813|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BX648797|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001025580|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_015365|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1	0.999618	CTCF.p2:0:1.000
chrX	128109841	128109933	reg1022686.p1	5.442	+	AY251532 BC014597 NM_138289	-923527	-	NM_001122716	-2156141	+	TSC_hg19_v1_chrX_-_125686794 BC035674 NM_178470	-2423071	-	BC117447 BC143954 BC143955 AK026426 TSC_hg19_v1_chrX_-_128657421	547521	-	EU636009 TSC_hg19_v1_chrX_-_128657443	547557	-	TSC_hg19_v1_chrX_-_128657468 NM_003069 NM_139035	547575	-	AY251532|ACTRT1|139741|actin-related protein T1##BC014597|ACTRT1|139741|actin-related protein T1##NM_138289|ACTRT1|139741|actin-related protein T1##NM_001122716|CXorf64|100130613|chromosome X open reading frame 64##BC035674|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##NM_178470|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##BC117447|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC143954|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC143955|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##AK026426|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##EU636009|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_003069|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_139035|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	0.136311	
chr12	105065556	105065737	reg1027718.p2	5.441	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-214559	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-214838	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-214875	+	TSC_hg19_v1_chr12_+_105153261 AF131762	87631	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	256617	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	314444	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.0	
chr13	106063112	106063207	reg1021181.p1	5.441	+	NM_000452 U10417	-2343964	-	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-2564673	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-2564905	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	55145	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	55432	+	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	1124190	-	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2	0.949467	CTCF.p2:-4:0.949
chr20	23321269	23321374	reg1027091.p1	5.441	+	AB527124 AM393282 AM393752 DQ891055 DQ894234 TSC_hg19_v1_chr20_-_23066962 AJ295142 AB209895 BC028075 AK299957 NM_012072 U94333	-254388	-	TSC_hg19_v1_chr20_-_23062805 AK056764	-258509	-	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	-291083	-	BC003410 NM_013248 TSC_hg19_v1_chr20_+_23331435 AK026360 BC000759 BC003029 AF156957 BC002687	10123	+	AK295362 TSC_hg19_v1_chr20_+_23342818 AK056477 AK293942 AK314599	21492	+	TSC_hg19_v1_chr20_+_23342853 AK289814	21538	+	AM393282|CD93|22918|CD93 molecule##AM393752|CD93|22918|CD93 molecule##DQ891055|CD93|22918|CD93 molecule##DQ894234|CD93|22918|CD93 molecule##AJ295142|CD93|22918|CD93 molecule##AB209895|CD93|22918|CD93 molecule##BC028075|CD93|22918|CD93 molecule##AK299957|CD93|22918|CD93 molecule##NM_012072|CD93|22918|CD93 molecule##U94333|CD93|22918|CD93 molecule##AK056764|CD93|22918|CD93 molecule##BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##BC003410|NXT1|29107|NTF2-like export factor 1##NM_013248|NXT1|29107|NTF2-like export factor 1##AK026360|NXT1|29107|NTF2-like export factor 1##BC000759|NXT1|29107|NTF2-like export factor 1##BC003029|NXT1|29107|NTF2-like export factor 1##AF156957|NXT1|29107|NTF2-like export factor 1##BC002687|NXT1|29107|NTF2-like export factor 1##AK295362|GZF1|64412|GDNF-inducible zinc finger protein 1##AK056477|GZF1|64412|GDNF-inducible zinc finger protein 1##AK293942|GZF1|64412|GDNF-inducible zinc finger protein 1##AK314599|GZF1|64412|GDNF-inducible zinc finger protein 1##AK289814|GZF1|64412|GDNF-inducible zinc finger protein 1	0.039598	
chr2	173539557	173539651	reg1026918.p1	5.440	+	AB528474 CU691664 TSC_hg19_v1_chr2_+_173420875 DQ891300 DQ893348 DQ894484 DQ896668 DQ234350	-118729	+	TSC_hg19_v1_chr2_+_173420856 AK312700 AK304388 BC039158	-118779	+	TSC_hg19_v1_chr2_+_173420776 NM_002610	-118823	+	TSC_hg19_v1_chr2_+_173600519 NM_007023	60917	+	AB209681 TSC_hg19_v1_chr2_+_173600599 U78516	60996	+	TSC_hg19_v1_chr2_+_173600637 AB027471 AK313084 BC024004 AB590290 DQ890549 DQ894011	61068	+	DQ891300|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ893348|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ894484|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ896668|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ234350|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##AK312700|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##AK304388|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##BC039158|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##NM_002610|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##NM_007023|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB209681|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##U78516|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB027471|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK313084|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##BC024004|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ890549|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ894011|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4	0.473518	CTCF.p2:0:0.474
chr3	162761017	162761113	reg1025597.p1	5.440	+	NM_001080440	-1546470	+	AF458592 BC037817 NM_001040100	-1671257	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-1821944	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	2035213	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	2153440	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	2794128	-	NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase	0.549764	CTCF.p2:7:0.550
chr3	72099649	72099765	reg1025488.p2	5.440	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-265436	-	AK313656 NM_173359	-295784	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-296185	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	797841	-	BC017274 TSC_hg19_v1_chr3_-_72897575	797868	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	797885	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.016252	
chr4	104350571	104350737	reg1025211.p1	5.440	+	AB527246 AB209996 TSC_hg19_v1_chr4_-_104119535 AK290362 NM_001813 Z15005	-231134	-	AK128463 TSC_hg19_v1_chr4_-_104020987 AF164790 AK023323 AK290160 AK291335 AK300626 BC037277 BC095414 AY358841 BC001953 NM_020139	-329654	-	NM_178833	-352485	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	290246	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	1061828	-	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	1065399	-	AB209996|CENPE|1062|centromere protein E, 312kDa##AK290362|CENPE|1062|centromere protein E, 312kDa##NM_001813|CENPE|1062|centromere protein E, 312kDa##Z15005|CENPE|1062|centromere protein E, 312kDa##AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_178833|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##AK127778|CXXC4|80319|CXXC finger protein 4	0.716785	CTCF.p2:100:0.551
chr5	7887348	7887497	reg1025806.p2	5.440	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-18112	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-18163	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-18290	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	1658772	-	BC095521 NM_019599	1743040	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	2362562	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.839006	CTCF.p2:-34:0.839
chr18	42339384	42339564	reg1023474.p2	5.439	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-78606	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-79360	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1482045	-	NM_001242692 AK292422	453478	+	AF349446 NM_007163	855291	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	964630	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.0	
chr19	43281298	43281391	reg1024089.p1	5.439	+	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	-11520	-	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	-36743	-	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	-182314	-	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	102481	-	CU676604 DQ893114 DQ896388 M31125 M33666 NM_002782 X17098 BC020652 NM_001031850	140649	-	BC136401 U18467 BC030979 AK309898 NM_001206650 NM_002783	159945	-	BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##DQ893114|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##DQ896388|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M31125|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M33666|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_002782|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##X17098|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC020652|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_001031850|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC136401|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##U18467|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##BC030979|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_001206650|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_002783|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)	0.694149	CTCF.p2:16:0.694
chr7	37765665	37765807	reg1028948.p1	5.439	+	BC043356 TSC_hg19_v1_chr7_+_37723380	-42354	+	NM_001206480	-276842	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	-277181	-	AB529245 AY288420 BC120951 BC120952 NM_181791	14259	+	BC036816 NM_016616	122462	+	AF026692 BC047684 BC058911 AK313029 TSC_hg19_v1_chr7_-_37956420 AK303977 AK302357	190675	-	NM_001206480|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1##AY288420|GPR141|353345|G protein-coupled receptor 141##BC120951|GPR141|353345|G protein-coupled receptor 141##BC120952|GPR141|353345|G protein-coupled receptor 141##NM_181791|GPR141|353345|G protein-coupled receptor 141##BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##AF026692|SFRP4|6424|secreted frizzled-related protein 4##BC047684|SFRP4|6424|secreted frizzled-related protein 4##BC058911|SFRP4|6424|secreted frizzled-related protein 4##AK313029|SFRP4|6424|secreted frizzled-related protein 4##AK303977|SFRP4|6424|secreted frizzled-related protein 4##AK302357|SFRP4|6424|secreted frizzled-related protein 4	0.909136	CTCF.p2:-54:0.909
chr12	1692548	1692714	reg1001485.p1	5.438	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-592179	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-633805	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-675549	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	10720	-	AY009399 NM_030775	33590	+	BC001749 NM_032642	45780	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.0	
chr12	7315341	7315485	reg1030023.p1	5.438	+	TSC_hg19_v1_chr12_+_7282990 AK316059 NM_014718 AJ277460 BC111491 AK299177 BC104767 BC112283 AB527393 BC148258	-32289	+	DQ892613 DQ895853 AY007436 AF212239 NM_031491 AK311977 AK096947 AK223378 BC029355	-33983	-	BC128428 AF178985 TSC_hg19_v1_chr12_-_7261802 AK222802 BC062428 AK314299 AK024084 NM_016546	-53585	-	AK292256 NM_001131026	26345	+	TSC_hg19_v1_chr12_+_7342306 Z48054 AK299105 NM_001131023 NM_001131024 NM_001131025 AK302742 AK225126 AK312317 AK316250 AK303515	26941	+	BC010621 X84899 NM_000319 U19721 AB527550 DQ891142 DQ894321 CU679763	27551	+	AK316059|CLSTN3|9746|calsyntenin 3##NM_014718|CLSTN3|9746|calsyntenin 3##AJ277460|CLSTN3|9746|calsyntenin 3##BC111491|CLSTN3|9746|calsyntenin 3##AK299177|CLSTN3|9746|calsyntenin 3##BC104767|CLSTN3|9746|calsyntenin 3##BC112283|CLSTN3|9746|calsyntenin 3##BC148258|CLSTN3|9746|calsyntenin 3##DQ892613|RBP5|83758|retinol binding protein 5, cellular##DQ895853|RBP5|83758|retinol binding protein 5, cellular##AY007436|RBP5|83758|retinol binding protein 5, cellular##AF212239|RBP5|83758|retinol binding protein 5, cellular##NM_031491|RBP5|83758|retinol binding protein 5, cellular##AK311977|RBP5|83758|retinol binding protein 5, cellular##AK096947|RBP5|83758|retinol binding protein 5, cellular##AK223378|RBP5|83758|retinol binding protein 5, cellular##BC029355|RBP5|83758|retinol binding protein 5, cellular##AF178985|C1RL|51279|complement component 1, r subcomponent-like##AK222802|C1RL|51279|complement component 1, r subcomponent-like##BC062428|C1RL|51279|complement component 1, r subcomponent-like##AK314299|C1RL|51279|complement component 1, r subcomponent-like##AK024084|C1RL|51279|complement component 1, r subcomponent-like##NM_016546|C1RL|51279|complement component 1, r subcomponent-like##AK292256|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131026|PEX5|5830|peroxisomal biogenesis factor 5##Z48054|PEX5|5830|peroxisomal biogenesis factor 5##AK299105|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131023|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131024|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131025|PEX5|5830|peroxisomal biogenesis factor 5##AK302742|PEX5|5830|peroxisomal biogenesis factor 5##AK225126|PEX5|5830|peroxisomal biogenesis factor 5##AK312317|PEX5|5830|peroxisomal biogenesis factor 5##AK316250|PEX5|5830|peroxisomal biogenesis factor 5##AK303515|PEX5|5830|peroxisomal biogenesis factor 5##BC010621|PEX5|5830|peroxisomal biogenesis factor 5##X84899|PEX5|5830|peroxisomal biogenesis factor 5##NM_000319|PEX5|5830|peroxisomal biogenesis factor 5##U19721|PEX5|5830|peroxisomal biogenesis factor 5##DQ891142|PEX5|5830|peroxisomal biogenesis factor 5##DQ894321|PEX5|5830|peroxisomal biogenesis factor 5	0.700828	CTCF.p2:-6:0.701
chr19	12251928	12252047	reg1002628.p2	5.438	+	AL080125 AK023094 BC036714 TSC_hg19_v1_chr19_-_12251166 NM_001203250 NM_021143	-831	-	AK128700 TSC_hg19_v1_chr19_+_12203111 AK124155	-48874	+	AK299732 AL832297 AK098117 NM_001136501 BC125185 BC125186 TSC_hg19_v1_chr19_+_12175767	-76347	+	BC007868 AK096560 AK292455 NM_145233 TSC_hg19_v1_chr19_-_12267555	15559	-	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	21922	+	AK023304 TSC_hg19_v1_chr19_+_12305836	53846	+	AL080125|ZNF20|7568|zinc finger protein 20##AK023094|ZNF20|7568|zinc finger protein 20##BC036714|ZNF20|7568|zinc finger protein 20##NM_001203250|ZNF20|7568|zinc finger protein 20##NM_021143|ZNF20|7568|zinc finger protein 20##AK128700|ZNF788|388507|zinc finger family member 788##AK299732|ZNF844|284391|zinc finger protein 844##AL832297|ZNF844|284391|zinc finger protein 844##AK098117|ZNF844|284391|zinc finger protein 844##NM_001136501|ZNF844|284391|zinc finger protein 844##BC125185|ZNF844|284391|zinc finger protein 844##BC125186|ZNF844|284391|zinc finger protein 844##BC007868|ZNF625|90589|zinc finger protein 625##AK096560|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##AK292455|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##NM_145233|ZNF625|90589|zinc finger protein 625##NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136##AK023304|LOC100289333|100289333|uncharacterized LOC100289333	0.0	
chr5	74230862	74230975	reg1025605.p1	5.438	+	AB020695 NM_015566 AK290004	-68280	-	BC039003 TSC_hg19_v1_chr5_+_74161735	-69192	+	BC005288 AK313784 AF372458 AF077615 NM_014886 AJ012409	-167831	+	AF132035 NM_016591	95805	-	AK097510 NM_001164443	301784	-	NM_000859 NM_001130996 TSC_hg19_v1_chr5_+_74633004	402086	+	AB020695|FAM169A|26049|family with sequence similarity 169, member A##NM_015566|FAM169A|26049|family with sequence similarity 169, member A##AK290004|FAM169A|26049|family with sequence similarity 169, member A##BC039003|LOC441086|441086|uncharacterized LOC441086##BC005288|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AK313784|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF372458|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF077615|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##NM_014886|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AJ012409|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF132035|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##NM_016591|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##AK097510|ANKRD31|256006|ankyrin repeat domain 31##NM_001164443|ANKRD31|256006|ankyrin repeat domain 31##NM_000859|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##NM_001130996|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase	0.497634	CTCF.p2:-21:0.498
chr2	20882077	20882239	reg1025551.p1	5.437	+	AF522369 NM_182828	-15735	+	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	-31310	-	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-235326	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	140695	-	M36676 TSC_hg19_v1_chr2_-_21225654 M31030	343535	-	TSC_hg19_v1_chr2_-_21228195 X03325	346090	-	AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43##M36676|APOB|338|apolipoprotein B (including Ag(x) antigen)##M31030|APOB|338|apolipoprotein B (including Ag(x) antigen)##X03325|APOB|338|apolipoprotein B (including Ag(x) antigen)	0.97518	CTCF.p2:-25:0.975
chr3	177077747	177077906	reg1021326.p1	5.437	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-162767	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	-162875	-	TSC_hg19_v1_chr3_-_176914267 BX648935	-163576	-	BC017825 NM_181361	1176397	+	AF209747 NM_005832	1198726	+	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	1711739	-	AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3	0.0	
chr4	7187949	7188049	reg1025147.p1	5.437	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-118198	-	AF298592 DQ891523 DQ894713 TSC_hg19_v1_chr4_-_7069792 AK098475 AK301695 AK312882 BC024242 NM_025196	-118222	-	TSC_hg19_v1_chr4_+_7045222 AK093974 AX748390 AB590997	-142735	+	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	6396	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	248657	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	753389	-	AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AF298592|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ891523|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ894713|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK098475|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK301695|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK312882|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##BC024242|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##NM_025196|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK093974|TADA2B|93624|transcriptional adaptor 2B##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1	0.930843	CTCF.p2:-13:0.911
chr6	44398993	44399111	reg1025524.p1	5.437	+	TSC_hg19_v1_chr6_+_44355461 AK128737 AK299738 BC001568 AB007892 AB590067 CU674768 DQ891623 DQ894814 U86753	-43552	+	NM_001253 TSC_hg19_v1_chr6_+_44355294	-43780	+	NM_145026 AK058171	-88612	+	NM_001015051 NM_001024630 AF053952	897004	+	AF073930 NM_003599 TSC_hg19_v1_chr6_-_45345614 AK303838 BC035816 BC050384 NM_181356 AK313874	946623	-	TSC_hg19_v1_chr6_+_45389825 NM_004348	990813	+	AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_001253|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_145026|SPATS1|221409|spermatogenesis associated, serine-rich 1##AK058171|SPATS1|221409|spermatogenesis associated, serine-rich 1##NM_001015051|RUNX2|860|runt-related transcription factor 2##NM_001024630|RUNX2|860|runt-related transcription factor 2##AF053952|RUNX2|860|runt-related transcription factor 2##AF073930|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_003599|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK303838|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC035816|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC050384|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_181356|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK313874|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_004348|RUNX2|860|runt-related transcription factor 2	0.079192	
chr10	26792922	26793039	reg1026486.p2	5.436	+	TSC_hg19_v1_chr10_+_26727703 AY152730	-65274	+	TSC_hg19_v1_chr10_+_26727679 BC054516	-65312	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	-65663	+	AK096048 TSC_hg19_v1_chr10_-_26986612	193604	-	TSC_hg19_v1_chr10_+_26986597 AK024802 AK223414 AB210838 NM_014317 BC063635 BC049211 AF118395	193666	+	TSC_hg19_v1_chr10_-_27057776 AK315914	264837	-	AY152730|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK024802|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK223414|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AB210838|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##NM_014317|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC063635|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC049211|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AF118395|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK315914|ABI1|10006|abl-interactor 1	0.657713	CTCF.p2:1:0.509
chr10	80184634	80184726	reg1026287.p2	5.436	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-391049	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-391124	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-395366	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	644108	+	TSC_hg19_v1_chr10_+_80899458 AK025812	714804	+	TSC_hg19_v1_chr10_+_81003207 AB033050	818450	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.186078	
chr12	113487957	113488093	reg1029567.p1	5.436	+	TSC_hg19_v1_chr12_+_113416323 NM_001032731 NM_002535 NM_016817 BC010625 BC053870 BC023637 AK292906 BC069052 BC049215 AK292796 M87284 M87434 AB590925 CU690608	-71685	+	AF063613 TSC_hg19_v1_chr12_+_113376306	-111685	+	TSC_hg19_v1_chr12_+_113376245 AK000608 NM_006187 BC113746 BC012015 AK292949	-111775	+	NM_004416 BC048216	7665	+	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	85387	-	AF086713 AB208935 AK294350 NM_001193520 NM_004658	86006	-	NM_001032731|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_002535|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_016817|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC010625|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC053870|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC023637|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292906|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC069052|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC049215|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292796|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87284|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87434|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AF063613|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##AK000608|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##NM_006187|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##BC113746|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##BC012015|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##AK292949|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)##BC048216|DTX1|1840|deltex homolog 1 (Drosophila)##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	0.933069	CTCF.p2:27:0.933
chr15	25683556	25683639	reg1026958.p1	5.436	+	L07557 NM_130838	-32948	-	AB061718 TSC_hg19_v1_chr15_+_25281192	-402448	+	AF019618 TSC_hg19_v1_chr15_+_25230248	-453373	+	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	504	-	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	581	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	424756	-	L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##AB061718|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N##AF019618|PAR5|8123|Prader-Willi/Angelman syndrome-5##BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A	0.0	
chr18	29851797	29851917	reg1023328.p1	5.436	+	AY695931 NM_005925 X81333 TSC_hg19_v1_chr18_+_29770001 BC136559 BC144244	-81860	+	NM_001191324 NM_198128 TSC_hg19_v1_chr18_+_29672650 AK023579 AB528421 DQ890744 DQ893914 CU676180 BT006878 CR457150	-179204	+	TSC_hg19_v1_chr18_+_29671959 AK315761 AF162680 BC018107	-179807	+	TSC_hg19_v1_chr18_-_29993196 D28353	141338	-	AL834491 BC121067 BC121068 AK025263 NM_001242409 NM_022751	198563	-	BC021267 AB037805 NM_020805	501050	-	AY695931|MEP1B|4225|meprin A, beta##NM_005925|MEP1B|4225|meprin A, beta##X81333|MEP1B|4225|meprin A, beta##BC136559|MEP1B|4225|meprin A, beta##BC144244|MEP1B|4225|meprin A, beta##NM_001191324|RNF138|51444|ring finger protein 138##NM_198128|RNF138|51444|ring finger protein 138##AK023579|RNF138|51444|ring finger protein 138##DQ890744|RNF138|51444|ring finger protein 138##DQ893914|RNF138|51444|ring finger protein 138##BT006878|RNF138|51444|ring finger protein 138##CR457150|RNF138|51444|ring finger protein 138##AK315761|RNF138|51444|ring finger protein 138##AF162680|RNF138|51444|ring finger protein 138##BC018107|RNF138|51444|ring finger protein 138##AL834491|FAM59A|64762|family with sequence similarity 59, member A##BC121067|FAM59A|64762|family with sequence similarity 59, member A##BC121068|FAM59A|64762|family with sequence similarity 59, member A##AK025263|FAM59A|64762|family with sequence similarity 59, member A##NM_001242409|FAM59A|64762|family with sequence similarity 59, member A##NM_022751|FAM59A|64762|family with sequence similarity 59, member A##BC021267|KLHL14|57565|kelch-like 14 (Drosophila)##AB037805|KLHL14|57565|kelch-like 14 (Drosophila)##NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)	0.488924	CTCF.p2:-3:0.489
chr2	43839728	43839855	reg1024643.p1	5.436	+	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	-16643	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	-386049	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-386061	-	TSC_hg19_v1_chr2_+_43864411 BC063310	24622	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	24648	+	NM_001101330	63669	-	AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_001101330|LOC728819|728819|hCG1645220	0.998215	CTCF.p2:-2:0.998
chr3	49377543	49377724	reg1011091.p1	5.436	+	TSC_hg19_v1_chr3_-_49377520 NM_001251877 NM_003363 NM_199443	-105	-	TSC_hg19_v1_chr3_-_49377487 BC125131 BC125130	-134	-	TSC_hg19_v1_chr3_-_49377482 AK291795	-153	-	TSC_hg19_v1_chr3_-_49395733 X13709 X13710 AK225835 BC007865 BC070258 BC000742	18082	-	M21304 TSC_hg19_v1_chr3_-_49395760 AK130160 D28370 NM_000581 NM_201397	18137	-	TSC_hg19_v1_chr3_-_49399989 BC000946	22381	-	NM_001251877|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##NM_003363|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##NM_199443|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##BC125131|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##BC125130|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##AK291795|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##X13709|GPX1|2876|glutathione peroxidase 1##X13710|GPX1|2876|glutathione peroxidase 1##AK225835|GPX1|2876|glutathione peroxidase 1##BC007865|GPX1|2876|glutathione peroxidase 1##BC070258|GPX1|2876|glutathione peroxidase 1##BC000742|GPX1|2876|glutathione peroxidase 1##M21304|GPX1|2876|glutathione peroxidase 1##AK130160|GPX1|2876|glutathione peroxidase 1##NM_000581|GPX1|2876|glutathione peroxidase 1##NM_201397|GPX1|2876|glutathione peroxidase 1##BC000946|RHOA|387|ras homolog gene family, member A	0.0	
chr15	22277217	22277321	reg1023090.p1	5.435	+	NM_207355 BC066981	-194131	-	NM_207355 BC066981	-1205291	-	NM_001145004	-1530156	-	BC136985 NM_001004719	91208	+	BC136597 BC136598 NM_001005241 DQ786223	105176	+	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	195953	-	NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4	0.997092	CTCF.p2:-10:0.997
chr15	87459192	87459306	reg1026420.p1	5.435	+	NM_152336	-774008	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-1121054	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-1121152	-	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	1340717	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	1551379	-	AB049944 NM_022839 NM_176805	1551434	+	NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11	0.833099	CTCF.p2:-11:0.818
chr20	3733813	3733927	reg1022919.p1	5.435	+	NM_001197327 NM_052970 AK297120 TSC_hg19_v1_chr20_+_3713341 AK301294 BC090857 BC110881 AK056712 BC117284 BC126263 BC143932	-20503	+	AF230073 BC141884 NM_023068	-46096	-	AY223855 AY223851 AY223850 AK095953 AK126498 AK304037 AF466287 AK123015 AK226148 BC125112 BC125113 AK300429 AY223853 AF466289 AB055891 AY223852 AY223854 NM_025220 NM_153202 AY358314 BC062663	-71110	-	TSC_hg19_v1_chr20_-_3748383 BC012196 AK124341 BC024036 AK000557 AK024220 AK225109 AK308520 BC069204 NM_001039140	14539	-	BC022476 AL080154 EF560745 NM_015417 AK313766	28216	-	BC012297 BC003649 TSC_hg19_v1_chr20_-_3765799 BC033658 BC040446	31973	-	NM_001197327|HSPA12B|116835|heat shock 70kD protein 12B##NM_052970|HSPA12B|116835|heat shock 70kD protein 12B##AK297120|HSPA12B|116835|heat shock 70kD protein 12B##AK301294|HSPA12B|116835|heat shock 70kD protein 12B##BC090857|HSPA12B|116835|heat shock 70kD protein 12B##BC110881|HSPA12B|116835|heat shock 70kD protein 12B##AK056712|HSPA12B|116835|heat shock 70kD protein 12B##BC117284|HSPA12B|116835|heat shock 70kD protein 12B##BC126263|HSPA12B|116835|heat shock 70kD protein 12B##BC143932|HSPA12B|116835|heat shock 70kD protein 12B##AF230073|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##BC141884|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##NM_023068|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##AY223855|ADAM33|80332|ADAM metallopeptidase domain 33##AY223851|ADAM33|80332|ADAM metallopeptidase domain 33##AY223850|ADAM33|80332|ADAM metallopeptidase domain 33##AK095953|ADAM33|80332|ADAM metallopeptidase domain 33##AK126498|ADAM33|80332|ADAM metallopeptidase domain 33##AK304037|ADAM33|80332|ADAM metallopeptidase domain 33##AF466287|ADAM33|80332|ADAM metallopeptidase domain 33##AK123015|ADAM33|80332|ADAM metallopeptidase domain 33##AK226148|ADAM33|80332|ADAM metallopeptidase domain 33##BC125112|ADAM33|80332|ADAM metallopeptidase domain 33##BC125113|ADAM33|80332|ADAM metallopeptidase domain 33##AK300429|ADAM33|80332|ADAM metallopeptidase domain 33##AY223853|ADAM33|80332|ADAM metallopeptidase domain 33##AF466289|ADAM33|80332|ADAM metallopeptidase domain 33##AB055891|ADAM33|80332|ADAM metallopeptidase domain 33##AY223852|ADAM33|80332|ADAM metallopeptidase domain 33##AY223854|ADAM33|80332|ADAM metallopeptidase domain 33##NM_025220|ADAM33|80332|ADAM metallopeptidase domain 33##NM_153202|ADAM33|80332|ADAM metallopeptidase domain 33##AY358314|ADAM33|80332|ADAM metallopeptidase domain 33##BC062663|ADAM33|80332|ADAM metallopeptidase domain 33##BC012196|C20orf27|54976|chromosome 20 open reading frame 27##AK124341|C20orf27|54976|chromosome 20 open reading frame 27##BC024036|C20orf27|54976|chromosome 20 open reading frame 27##AK000557|C20orf27|54976|chromosome 20 open reading frame 27##AK024220|C20orf27|54976|chromosome 20 open reading frame 27##AK225109|C20orf27|54976|chromosome 20 open reading frame 27##AK308520|C20orf27|54976|chromosome 20 open reading frame 27##BC069204|C20orf27|54976|chromosome 20 open reading frame 27##NM_001039140|C20orf27|54976|chromosome 20 open reading frame 27##BC022476|SPEF1|25876|sperm flagellar 1##AL080154|SPEF1|25876|sperm flagellar 1##EF560745|SPEF1|25876|sperm flagellar 1##NM_015417|SPEF1|25876|sperm flagellar 1##AK313766|SPEF1|25876|sperm flagellar 1##BC012297|CENPB|1059|centromere protein B, 80kDa##BC003649|CENPB|1059|centromere protein B, 80kDa##BC033658|CENPB|1059|centromere protein B, 80kDa##BC040446|CENPB|1059|centromere protein B, 80kDa	0.986017	CTCF.p2:4:0.986
chr20	62330461	62330641	reg1025541.p2	5.435	+	AF217794 TSC_hg19_v1_chr20_+_62328078 AY124378 AY124379 AB590899 AF134240	-2457	+	TSC_hg19_v1_chr20_+_62328005 NM_003823 AF104419 AY358279 BC017065	-2540	+	TSC_hg19_v1_chr20_+_62321100 AL080127	-9403	+	NM_001083113 AB058750	8253	+	TSC_hg19_v1_chr20_-_62339259 BC092480 BC021023 BC093967 BC143447 BC143448 BC143467 BC143472 BC143477	8688	-	TSC_hg19_v1_chr20_-_62339374 BC010068 NM_001134758 NM_003224	8795	-	AF134240|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##NM_003823|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AF104419|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AY358279|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##BC017065|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AL080127|RTEL1|51750|regulator of telomere elongation helicase 1##NM_001083113|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##AB058750|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##BC092480|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC021023|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC093967|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143447|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143448|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143467|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143472|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143477|ARFRP1|10139|ADP-ribosylation factor related protein 1##NM_001134758|ARFRP1|10139|ADP-ribosylation factor related protein 1##NM_003224|ARFRP1|10139|ADP-ribosylation factor related protein 1	0.0	
chr22	21138686	21138821	reg1025263.p1	5.435	+	TSC_hg19_v1_chr22_+_21128411 NM_000185 AK314200 AK225292 BC035028	-10357	+	L36151 NM_002650	-49799	-	TSC_hg19_v1_chr22_+_20918811 U80745	-219929	+	AB384703 TSC_hg19_v1_chr22_-_21213029 AK302424	74277	-	AB210002 TSC_hg19_v1_chr22_-_21213071	74318	-	AK131431 NM_058004 TSC_hg19_v1_chr22_-_21213100	74376	-	NM_000185|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK314200|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK225292|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##BC035028|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##L36151|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_002650|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##U80745|MED15|51586|mediator complex subunit 15##AK302424|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##AB210002|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##AK131431|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_058004|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha	0.346441	CTCF.p2:-10:0.315
chr22	40920613	40920744	reg1016715.p1	5.435	+	TSC_hg19_v1_chr22_-_40859427 AJ297257	-61248	-	TSC_hg19_v1_chr22_+_40766652 AK301042	-154023	+	TSC_hg19_v1_chr22_+_40766636 AY308849 BC008078	-154037	+	TSC_hg19_v1_chr22_-_41032681 AF368061	111975	-	TSC_hg19_v1_chr22_-_41032716 BC115039 NM_020831 AF448806 AB037859 BC064620 AJ297258	112026	-	AK314857 AF490537 NM_005297 BC001736 BC021146 AY745811 AY747629 CR456497 AB063174 CU013094 CU013382 AB463112 AY562945 BT006725 DQ893603 DQ895065	154543	+	AJ297257|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AK301042|SGSM3|27352|small G protein signaling modulator 3##AY308849|SGSM3|27352|small G protein signaling modulator 3##BC008078|SGSM3|27352|small G protein signaling modulator 3##AF368061|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC115039|MKL1|57591|megakaryoblastic leukemia (translocation) 1##NM_020831|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF448806|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AB037859|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC064620|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AJ297258|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AK314857|MCHR1|2847|melanin-concentrating hormone receptor 1##AF490537|MCHR1|2847|melanin-concentrating hormone receptor 1##NM_005297|MCHR1|2847|melanin-concentrating hormone receptor 1##BC001736|MCHR1|2847|melanin-concentrating hormone receptor 1##BC021146|MCHR1|2847|melanin-concentrating hormone receptor 1##AY745811|MCHR1|2847|melanin-concentrating hormone receptor 1##AY747629|MCHR1|2847|melanin-concentrating hormone receptor 1##CR456497|MCHR1|2847|melanin-concentrating hormone receptor 1##AB063174|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013094|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013382|MCHR1|2847|melanin-concentrating hormone receptor 1##AY562945|MCHR1|2847|melanin-concentrating hormone receptor 1##BT006725|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ893603|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ895065|MCHR1|2847|melanin-concentrating hormone receptor 1	0.039964	
chr3	129042896	129042985	reg1025283.p1	5.435	+	TSC_hg19_v1_chr3_-_129035130 BC000426 NM_006026	-7840	-	TSC_hg19_v1_chr3_+_128997745 BC010125 BC050686 NM_001006109 BC009993	-45128	+	TSC_hg19_v1_chr3_+_128997674 AF201934 NM_020187 BC088363 AK297501 AK309891 AK225264	-45278	+	TSC_hg19_v1_chr3_-_129118263 BC053996 AK093477	75323	-	CU688234 AK127968 BC031104 BC066975 NM_207307	104472	-	AM180876 CR450305 CU680042 BC034463 U56254 U56428 TSC_hg19_v1_chr3_-_129158722 BC011752	115778	-	BC000426|H1FX|8971|H1 histone family, member X##NM_006026|H1FX|8971|H1 histone family, member X##BC010125|C3orf37|56941|chromosome 3 open reading frame 37##BC050686|C3orf37|56941|chromosome 3 open reading frame 37##NM_001006109|C3orf37|56941|chromosome 3 open reading frame 37##BC009993|C3orf37|56941|chromosome 3 open reading frame 37##AF201934|C3orf37|56941|chromosome 3 open reading frame 37##NM_020187|C3orf37|56941|chromosome 3 open reading frame 37##BC088363|C3orf37|56941|chromosome 3 open reading frame 37##AK297501|C3orf37|56941|chromosome 3 open reading frame 37##AK309891|C3orf37|56941|chromosome 3 open reading frame 37##AK225264|C3orf37|56941|chromosome 3 open reading frame 37##BC053996|RPL32P3|132241|ribosomal protein L32 pseudogene 3##AK093477|RPL32P3|132241|ribosomal protein L32 pseudogene 3##AK127968|C3orf25|90288|chromosome 3 open reading frame 25##BC031104|C3orf25|90288|chromosome 3 open reading frame 25##BC066975|C3orf25|90288|chromosome 3 open reading frame 25##NM_207307|C3orf25|90288|chromosome 3 open reading frame 25##AM180876|MBD4|8930|methyl-CpG binding domain protein 4##CR450305|MBD4|8930|methyl-CpG binding domain protein 4##BC034463|MBD4|8930|methyl-CpG binding domain protein 4##BC011752|MBD4|8930|methyl-CpG binding domain protein 4	0.150348	
chr5	96065002	96065103	reg1026921.p1	5.435	+	NM_173060 AL832349 AB026049 AK303900 TSC_hg19_v1_chr5_+_96038509 AK298541 AK299402 AK300624 AK314290 AK315146 AL832174 BX648397 AK303836 AK297879	-26517	+	TSC_hg19_v1_chr5_+_95998728 AK296919	-66335	+	BC013579 TSC_hg19_v1_chr5_+_95998220	-66857	+	TSC_hg19_v1_chr5_-_96143614 AF106037 AF183569 AF222340 AY358590 AK291636 AY028806 AY028807	78570	-	TSC_hg19_v1_chr5_-_96143701 NM_001040458 NM_016442	78738	-	AK310535 BC030775 NM_001198541	84773	-	NM_173060|CAST|831|calpastatin##AL832349|CAST|831|calpastatin##AB026049|CAST|831|calpastatin##AK303900|CAST|831|calpastatin##AK298541|CAST|831|calpastatin##AK299402|CAST|831|calpastatin##AK300624|CAST|831|calpastatin##AK314290|CAST|831|calpastatin##AK315146|CAST|831|calpastatin##AL832174|CAST|831|calpastatin##BX648397|CAST|831|calpastatin##AK303836|CAST|831|calpastatin##AK297879|CAST|831|calpastatin##AK296919|CAST|831|calpastatin##BC013579|CAST|831|calpastatin##AF106037|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AF183569|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AF222340|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AY358590|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AK291636|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AY028806|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AY028807|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_001040458|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_016442|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AK310535|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##BC030775|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_001198541|ERAP1|51752|endoplasmic reticulum aminopeptidase 1	0.984661	CTCF.p2:-2:0.985
chr8	108508169	108508280	reg1026949.p2	5.435	+	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	-725780	-	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	-769869	+	TSC_hg19_v1_chr8_+_107670114 AK292899 BC032710 BC019691	-838109	+	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	1964	-	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	587650	-	AB527268 CR457029 CR542275 CU674376 CU677689 CU678957 DQ892278 DQ895478 BC000734 TSC_hg19_v1_chr8_-_109260938 U54562 U85947	752710	-	AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AK292899|OXR1|55074|oxidation resistance 1##BC032710|OXR1|55074|oxidation resistance 1##BC019691|OXR1|55074|oxidation resistance 1##U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2##CR457029|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR542275|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ892278|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ895478|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC000734|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U54562|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U85947|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E	0.0	
chr8	139712742	139712831	reg1024960.p2	5.435	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-203680	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-3242585	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-3243128	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	213458	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	1002496	-	AB067469 TSC_hg19_v1_chr8_-_141467841	1755039	-	AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9	0.999595	CTCF.p2:-8:1.000
chr12	86314254	86314396	reg1024653.p1	5.434	+	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	-46199	+	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	-84088	-	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	-84280	-	BC035851 NM_013244	918332	-	AL833338 BC062424 AK093140 AX747948 NM_152589	2108835	-	TSC_hg19_v1_chr12_+_88429312 AK095477 NM_001009894 CR936776 AK311222 BC058014 BX640968 BX537868 BX648026 AK311153 BC035136 BC092422 AB590923 AM392924 AL137488	2115061	+	AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##AL833338|C12orf50|160419|chromosome 12 open reading frame 50##BC062424|C12orf50|160419|chromosome 12 open reading frame 50##AK093140|C12orf50|160419|chromosome 12 open reading frame 50##NM_152589|C12orf50|160419|chromosome 12 open reading frame 50##AK095477|C12orf29|91298|chromosome 12 open reading frame 29##NM_001009894|C12orf29|91298|chromosome 12 open reading frame 29##CR936776|C12orf29|91298|chromosome 12 open reading frame 29##AK311222|C12orf29|91298|chromosome 12 open reading frame 29##BC058014|C12orf29|91298|chromosome 12 open reading frame 29##BX640968|C12orf29|91298|chromosome 12 open reading frame 29##BX537868|C12orf29|91298|chromosome 12 open reading frame 29##BX648026|C12orf29|91298|chromosome 12 open reading frame 29##AK311153|C12orf29|91298|chromosome 12 open reading frame 29##BC035136|C12orf29|91298|chromosome 12 open reading frame 29##BC092422|C12orf29|91298|chromosome 12 open reading frame 29##AM392924|C12orf29|91298|chromosome 12 open reading frame 29##AL137488|C12orf29|91298|chromosome 12 open reading frame 29	0.997686	CTCF.p2:-5:0.998
chr1	40282401	40282581	reg1002397.p1	5.434	+	TSC_hg19_v1_chr1_-_40254528 AY303955 NM_001720	-27965	-	TSC_hg19_v1_chr1_-_40254516 BC108678	-27976	-	BC023526 TSC_hg19_v1_chr1_-_40254233	-28302	-	AY702933 AY702934 AY702935 AY702936 AY702937 AY702938 AY702939 AY702940 AY702941 AY702942 AY702943 AY702944 AY702945 AY702946 AY702947 TSC_hg19_v1_chr1_-_40349138 AY052768 BC010741	66633	-	AK296453 AK307910 TSC_hg19_v1_chr1_-_40349167	66676	-	TSC_hg19_v1_chr1_-_40349179 AK223478 AK304759 AY303390 BC128155 BC128156 NM_017646 BC107569	66683	-	AY303955|BMP8B|656|bone morphogenetic protein 8b##NM_001720|BMP8B|656|bone morphogenetic protein 8b##BC108678|BMP8B|656|bone morphogenetic protein 8b##BC023526|BMP8B|656|bone morphogenetic protein 8b##AY702933|TRIT1|54802|tRNA isopentenyltransferase 1##AY702934|TRIT1|54802|tRNA isopentenyltransferase 1##AY702935|TRIT1|54802|tRNA isopentenyltransferase 1##AY702936|TRIT1|54802|tRNA isopentenyltransferase 1##AY702937|TRIT1|54802|tRNA isopentenyltransferase 1##AY702938|TRIT1|54802|tRNA isopentenyltransferase 1##AY702939|TRIT1|54802|tRNA isopentenyltransferase 1##AY702940|TRIT1|54802|tRNA isopentenyltransferase 1##AY702941|TRIT1|54802|tRNA isopentenyltransferase 1##AY702942|TRIT1|54802|tRNA isopentenyltransferase 1##AY702943|TRIT1|54802|tRNA isopentenyltransferase 1##AY702944|TRIT1|54802|tRNA isopentenyltransferase 1##AY702945|TRIT1|54802|tRNA isopentenyltransferase 1##AY702946|TRIT1|54802|tRNA isopentenyltransferase 1##AY702947|TRIT1|54802|tRNA isopentenyltransferase 1##AY052768|TRIT1|54802|tRNA isopentenyltransferase 1##BC010741|TRIT1|54802|tRNA isopentenyltransferase 1##AK296453|TRIT1|54802|tRNA isopentenyltransferase 1##AK307910|TRIT1|54802|tRNA isopentenyltransferase 1##AK223478|TRIT1|54802|tRNA isopentenyltransferase 1##AK304759|TRIT1|54802|tRNA isopentenyltransferase 1##AY303390|TRIT1|54802|tRNA isopentenyltransferase 1##BC128155|TRIT1|54802|tRNA isopentenyltransferase 1##BC128156|TRIT1|54802|tRNA isopentenyltransferase 1##NM_017646|TRIT1|54802|tRNA isopentenyltransferase 1##BC107569|TRIT1|54802|tRNA isopentenyltransferase 1	0.0	
chr3	140691827	140691944	reg1024219.p1	5.434	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	-31118	+	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	-294926	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-1037633	+	TSC_hg19_v1_chr3_+_140770412 BC051354	78593	+	AF403029 BC008324 NM_080862 AK056367	78872	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	258801	+	NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2	0.021818	
chr10	29280695	29280782	reg1005129.p1	5.433	+	TSC_hg19_v1_chr10_+_28966451 NM_012342 AK290639 BC019252 AK223065 U23070	-314291	+	TSC_hg19_v1_chr10_+_28878692 BC010356	-402032	+	AB590052 AK297460 TSC_hg19_v1_chr10_+_28822585	-458192	+	NM_032517 BC021730 AY358694	297278	+	TSC_hg19_v1_chr10_+_29698475 BC066966 BC050354	417731	+	BC107795 AK056080 TSC_hg19_v1_chr10_+_29698485	417747	+	NM_012342|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK290639|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC019252|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK223065|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##U23070|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC010356|WAC|51322|WW domain containing adaptor with coiled-coil##AK297460|WAC|51322|WW domain containing adaptor with coiled-coil##NM_032517|LYZL1|84569|lysozyme-like 1##BC021730|LYZL1|84569|lysozyme-like 1##AY358694|LYZL1|84569|lysozyme-like 1##BC066966|LOC387647|387647|patched domain containing 3 pseudogene##BC050354|LOC387647|387647|patched domain containing 3 pseudogene##BC107795|LOC387647|387647|patched domain containing 3 pseudogene##AK056080|LOC387647|387647|patched domain containing 3 pseudogene	0.0	
chr12	58150637	58150759	reg1026170.p1	5.433	+	TSC_hg19_v1_chr12_+_58148857 BC050397 NM_138396 BC036455	-1861	+	TSC_hg19_v1_chr12_-_58146135 BC005864 AK310724 M14505 NM_000075	-4525	-	TSC_hg19_v1_chr12_-_58146114 BC015669	-4585	-	TSC_hg19_v1_chr12_-_58159389 DQ925362 DQ925363 DQ925364 DQ925365 DQ925366 DQ925367 DQ925368 DQ925369 DQ925370 DQ925371	8728	-	AB005989 AF246895 CU674882 AF020192 BC136386 AK314953 BC001776 BC020267 AB005038 NM_000785	10201	-	TSC_hg19_v1_chr12_-_58165889 BC000550 X96698 AK223202 AK314851 NM_005371 NM_023033 Y18643 AB463884	15211	-	BC050397|MARCH9|92979|membrane-associated ring finger (C3HC4) 9##NM_138396|MARCH9|92979|membrane-associated ring finger (C3HC4) 9##BC036455|MARCH9|92979|membrane-associated ring finger (C3HC4) 9##BC005864|CDK4|1019|cyclin-dependent kinase 4##AK310724|CDK4|1019|cyclin-dependent kinase 4##M14505|CDK4|1019|cyclin-dependent kinase 4##NM_000075|CDK4|1019|cyclin-dependent kinase 4##BC015669|CDK4|1019|cyclin-dependent kinase 4##DQ925362|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##DQ925363|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##DQ925367|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##DQ925368|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##DQ925369|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##DQ925370|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##AB005989|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##AF246895|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##AF020192|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##BC136386|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##AK314953|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##BC001776|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##BC020267|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##AB005038|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##NM_000785|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##BC000550|METTL1|4234|methyltransferase like 1##X96698|METTL1|4234|methyltransferase like 1##AK223202|METTL1|4234|methyltransferase like 1##AK314851|METTL1|4234|methyltransferase like 1##NM_005371|METTL1|4234|methyltransferase like 1##NM_023033|METTL1|4234|methyltransferase like 1##Y18643|METTL1|4234|methyltransferase like 1	0.899186	CTCF.p2:12:0.899
chr16	14448698	14448871	reg1023214.p1	5.433	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-154586	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-168266	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-283698	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	275244	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	275349	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	277955	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.0	
chr19	2183016	2183153	reg1021463.p1	5.433	+	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	-18946	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-31531	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	-31542	-	BC021037 TSC_hg19_v1_chr19_+_2222534	39390	+	BC032803 TSC_hg19_v1_chr19_+_2232168	49037	+	CR457253 CU679203 TSC_hg19_v1_chr19_-_2236329 AK092742 AX747701 BC003084 BC008966 AK001159 NM_018049	53205	-	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##CR457253|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK092742|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC003084|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC008966|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK001159|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##NM_018049|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1	0.0	
chr20	10652135	10652245	reg1027403.p3	5.433	+	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-236214	+	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	-237351	-	AF221993 NM_018848	-239621	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	2014	-	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	2379	-	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1219259	+	BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3	0.0	
chr11	94885044	94885140	reg1002072.p3	5.432	+	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-62080	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-84684	+	TSC_hg19_v1_chr11_+_94800329 BC057783 BC006181	-84748	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	79212	-	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	637559	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	637641	-	AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8##BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B	0.0	
chr20	37075172	37075318	reg1026780.p1	5.432	+	TSC_hg19_v1_chr20_-_37063964 BC012894 BC052370 BC032119 BX640887	-11273	-	TSC_hg19_v1_chr20_+_36974884 AK313625 BC022256 NM_004139 AY344471 AF105067 AB590524 CU692512 DQ891394 DQ894434 M35533	-100374	+	NM_001725 BC040955 TSC_hg19_v1_chr20_+_36932591 AK315328 AX713278 AX746123 AX752831 J04739 AK296568 BC032230 CU691936 DQ414688 AF322588	-142657	+	TSC_hg19_v1_chr20_+_37075314 AK055434 AK290212 AF454939 AF497716 BC021083 BC040237	82	+	TSC_hg19_v1_chr20_+_37101489 AB033045 BC047482 NM_020336 AK304242 CR936800	26263	+	BC029594 NM_001018082 BC119704 BC119705	134595	+	BC012894|LOC388796|388796|uncharacterized LOC388796##BC052370|LOC388796|388796|uncharacterized LOC388796##BC032119|LOC388796|388796|uncharacterized LOC388796##BX640887|LOC388796|388796|uncharacterized LOC388796##AK313625|LBP|3929|lipopolysaccharide binding protein##BC022256|LBP|3929|lipopolysaccharide binding protein##NM_004139|LBP|3929|lipopolysaccharide binding protein##AY344471|LBP|3929|lipopolysaccharide binding protein##AF105067|LBP|3929|lipopolysaccharide binding protein##DQ891394|LBP|3929|lipopolysaccharide binding protein##DQ894434|LBP|3929|lipopolysaccharide binding protein##M35533|LBP|3929|lipopolysaccharide binding protein##NM_001725|BPI|671|bactericidal/permeability-increasing protein##BC040955|BPI|671|bactericidal/permeability-increasing protein##AK315328|BPI|671|bactericidal/permeability-increasing protein##AX713278|BPI|671|bactericidal/permeability-increasing protein##AX746123|BPI|671|bactericidal/permeability-increasing protein##AX752831|BPI|671|bactericidal/permeability-increasing protein##J04739|BPI|671|bactericidal/permeability-increasing protein##AK296568|BPI|671|bactericidal/permeability-increasing protein##BC032230|BPI|671|bactericidal/permeability-increasing protein##DQ414688|BPI|671|bactericidal/permeability-increasing protein##AF322588|BPI|671|bactericidal/permeability-increasing protein##AK055434|SNHG11|128439|small nucleolar RNA host gene 11 (non-protein coding)##BC040237|SNHG11|128439|small nucleolar RNA host gene 11 (non-protein coding)##AB033045|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##BC047482|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##NM_020336|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##AK304242|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##CR936800|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##BC029594|ADIG|149685|adipogenin##NM_001018082|ADIG|149685|adipogenin##BC119704|ADIG|149685|adipogenin##BC119705|ADIG|149685|adipogenin	0.0	
chr21	43835575	43835755	reg1017204.p2	5.432	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-11653	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-19504	-	M12075 BC032811 NM_003225 X00474 X52003	-49043	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	80715	-	AJ269529 NM_018964	84076	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	98338	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.0	
chr9	126817024	126817170	reg1025228.p1	5.432	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-43026	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-43214	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-124786	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	202913	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	203148	+	TSC_hg19_v1_chr9_+_127020255 AB026289	203167	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.012355	
chr19	14797266	14797364	reg1008021.p1	5.431	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	-11638	-	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	-103401	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	-114466	-	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	3449	+	BC082991 AF114491 AK301458 AK222891 AK298700 TSC_hg19_v1_chr19_-_14887654	90323	-	TSC_hg19_v1_chr19_-_14887656 AK291776	90397	-	AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333##BC082991|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AF114491|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK301458|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK222891|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK298700|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK291776|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2	0.0	
chr2	101868385	101868459	reg1024317.p1	5.431	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	-100639	-	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	-249700	+	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	-431656	+	TSC_hg19_v1_chr2_+_101869347 NM_017546	915	+	TSC_hg19_v1_chr2_+_101869378 AF103798 BC064421 BC018664	970	+	AM392566 AB463234 TSC_hg19_v1_chr2_-_101925153 BC019355 BC032328 AK074985 AK075141 AY450390 BC045743 AK129799 NM_173647	56720	-	AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_017546|C2orf29|55571|chromosome 2 open reading frame 29##AF103798|C2orf29|55571|chromosome 2 open reading frame 29##BC064421|C2orf29|55571|chromosome 2 open reading frame 29##BC018664|C2orf29|55571|chromosome 2 open reading frame 29##AM392566|RNF149|284996|ring finger protein 149##BC019355|RNF149|284996|ring finger protein 149##BC032328|RNF149|284996|ring finger protein 149##AK074985|RNF149|284996|ring finger protein 149##AK075141|RNF149|284996|ring finger protein 149##AY450390|RNF149|284996|ring finger protein 149##BC045743|RNF149|284996|ring finger protein 149##AK129799|RNF149|284996|ring finger protein 149##NM_173647|RNF149|284996|ring finger protein 149	0.748108	CTCF.p2:-14:0.748
chr3	165342705	165342822	reg1024020.p1	5.431	+	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	-428258	-	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	-546485	-	NM_001080440	-4128168	+	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	212430	-	NM_000055 TSC_hg19_v1_chr3_-_165555283	212504	-	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	1755314	-	BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001080440|OTOL1|131149|otolin 1##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##NM_000055|BCHE|590|butyrylcholinesterase##AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing	0.972855	CTCF.p2:-20:0.973
chr13	34374480	34374587	reg1025214.p1	5.430	+	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	-123598	-	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	-449765	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	-514666	-	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	17694	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	17751	+	TSC_hg19_v1_chr13_+_35516429 NM_015678 AF467288	1141925	+	BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_015678|NBEA|26960|neurobeachin##AF467288|NBEA|26960|neurobeachin	0.028903	
chr1	234752878	234753039	reg1027021.p2	5.429	+	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-7712	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-9100	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-9127	-	TSC_hg19_v1_chr1_-_234895746 AF193050	142816	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	539131	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	539273	-	BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.0	
chr15	97436672	97436794	reg1027566.p2	5.429	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	-110061	+	NM_001145157	-560165	+	AK316086 NM_001145156	-560940	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	1067186	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	1067218	+	AK097062 AK097062 NM_182562	1620877	-	AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B	0.0	
chrX	37079206	37079326	reg1027874.p1	5.429	+	NM_001013736	-52835	+	NM_001098843	-825216	+	AK093920 AX748365 NM_173695	-1014214	+	NM_000950 NM_001142395 NM_001173486 BC030786 TSC_hg19_v1_chrX_+_37208616 BC012608 NM_001173489 NM_001173490 AK312904 BC060833 AF009242 BC041591	129322	+	AK124915 NM_001170331 NM_198511 TSC_hg19_v1_chrX_+_37430917	351604	+	TSC_hg19_v1_chrX_+_37431024 BC093667 BC093669 BC143528	351765	+	NM_001013736|FAM47C|442444|family with sequence similarity 47, member C##NM_001098843|CXorf30|645090|chromosome X open reading frame 30##AK093920|CXorf59|286464|chromosome X open reading frame 59##NM_173695|CXorf59|286464|chromosome X open reading frame 59##NM_000950|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001142395|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173486|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC030786|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC012608|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173489|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173490|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AK312904|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC060833|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AF009242|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC041591|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AK124915|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_001170331|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_198511|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##BC093667|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##BC093669|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##BC143528|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)	0.683666	CTCF.p2:4:0.684
chr8	145473272	145473400	reg1027246.p1	5.428	+	BC003035 BC009915 NM_016458 AK098226 BC015471	-35433	+	AX721087 NM_001008271 NM_001080514	-151847	+	AK295740 NM_001099280 NM_001099281 NM_032450 AK093563 AX748203 BC057824 BC067855 BC092486	-270408	+	AX721087 NM_001008271 NM_001080514	17239	+	BC007274 TSC_hg19_v1_chr8_-_145515060 DQ896815 EU176248	41701	-	BC017674 TSC_hg19_v1_chr8_-_145515087 AK290677 BC013787 BC013980 AK315612	41743	-	BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##AK295740|HEATR7A|727957|HEAT repeat containing 7A##NM_001099280|HEATR7A|727957|HEAT repeat containing 7A##NM_001099281|HEATR7A|727957|HEAT repeat containing 7A##NM_032450|HEATR7A|727957|HEAT repeat containing 7A##AK093563|HEATR7A|727957|HEAT repeat containing 7A##BC057824|HEATR7A|727957|HEAT repeat containing 7A##BC067855|HEATR7A|727957|HEAT repeat containing 7A##BC092486|HEATR7A|727957|HEAT repeat containing 7A##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##BC007274|BOP1|23246|block of proliferation 1##DQ896815|BOP1|23246|block of proliferation 1##EU176248|BOP1|23246|block of proliferation 1##BC017674|BOP1|23246|block of proliferation 1##AK290677|BOP1|23246|block of proliferation 1##BC013787|BOP1|23246|block of proliferation 1##BC013980|BOP1|23246|block of proliferation 1##AK315612|BOP1|23246|block of proliferation 1	0.377071	CTCF.p2:98:0.351
chr15	91191624	91191804	reg1002828.p2	5.427	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-118518	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-260175	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-260208	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	68900	+	NM_002569 X17094	220170	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	235987	+	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene	0.0	
chr1	78799235	78799346	reg1025701.p1	5.427	+	TSC_hg19_v1_chr1_+_78511749 AK225941 AB073737 AB528004 CU690284	-287528	+	BC036075 NM_017655 TSC_hg19_v1_chr1_+_78511713	-287627	+	TSC_hg19_v1_chr1_+_78470622 U40992 AK313205 AB209922 BC034721 NM_007034	-328676	+	NM_000959 NM_001039585 AK292845 AK312816 AY485530 L24470 BC112965 AF004021	157494	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	286841	+	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	316208	+	AK225941|GIPC2|54810|GIPC PDZ domain containing family, member 2##AB073737|GIPC2|54810|GIPC PDZ domain containing family, member 2##BC036075|GIPC2|54810|GIPC PDZ domain containing family, member 2##NM_017655|GIPC2|54810|GIPC PDZ domain containing family, member 2##U40992|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##AK313205|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##AB209922|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##BC034721|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##NM_007034|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##NM_000959|PTGFR|5737|prostaglandin F receptor (FP)##NM_001039585|PTGFR|5737|prostaglandin F receptor (FP)##AK292845|PTGFR|5737|prostaglandin F receptor (FP)##AK312816|PTGFR|5737|prostaglandin F receptor (FP)##AY485530|PTGFR|5737|prostaglandin F receptor (FP)##L24470|PTGFR|5737|prostaglandin F receptor (FP)##BC112965|PTGFR|5737|prostaglandin F receptor (FP)##AF004021|PTGFR|5737|prostaglandin F receptor (FP)##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44	0.0	
chr11	67411653	67411776	reg1023859.p1	5.426	+	BC113485 BC113487 AY229977 NM_005995	-4687	-	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	-14311	-	BC007619 TSC_hg19_v1_chr11_+_67377037	-34733	+	AY032593 AY040761 AY169233 BC008689 NM_080658	6404	-	AK299956 TSC_hg19_v1_chr11_-_67442068	30329	-	TSC_hg19_v1_chr11_-_67442086 AK309277 NM_000695 AK092464	30417	-	BC113485|TBX10|347853|T-box 10##BC113487|TBX10|347853|T-box 10##AY229977|TBX10|347853|T-box 10##NM_005995|TBX10|347853|T-box 10##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC007619|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AY032593|ACY3|91703|aspartoacylase (aminocyclase) 3##AY040761|ACY3|91703|aspartoacylase (aminocyclase) 3##AY169233|ACY3|91703|aspartoacylase (aminocyclase) 3##BC008689|ACY3|91703|aspartoacylase (aminocyclase) 3##NM_080658|ACY3|91703|aspartoacylase (aminocyclase) 3##AK299956|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	0.534486	CTCF.p2:-45:0.505
chr3	9266337	9266425	reg1025171.p1	5.426	+	AB528316 DQ891197 DQ894380 TSC_hg19_v1_chr3_-_9005128 AY004333 BC001302 AK222771 AF169796 AK023075 NM_020165	-261251	-	TSC_hg19_v1_chr3_-_8811300 NM_000916	-455097	-	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	-455295	-	AB007871 AB384477 AK094355 AF427144 TSC_hg19_v1_chr3_-_9290871 AF464189	24363	-	TSC_hg19_v1_chr3_-_9291320 NM_001033117 NM_014850 BC140004 AK054831	24937	-	TSC_hg19_v1_chr3_+_9404750 NM_001114092 NM_015453 AK023263 BC001622 AK001680 BC010421	138394	+	DQ891197|RAD18|56852|RAD18 homolog (S. cerevisiae)##DQ894380|RAD18|56852|RAD18 homolog (S. cerevisiae)##AY004333|RAD18|56852|RAD18 homolog (S. cerevisiae)##BC001302|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK222771|RAD18|56852|RAD18 homolog (S. cerevisiae)##AF169796|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK023075|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_020165|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_000916|OXTR|5021|oxytocin receptor##X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor##AB007871|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK094355|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF427144|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF464189|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_001114092|THUMPD3|25917|THUMP domain containing 3##NM_015453|THUMPD3|25917|THUMP domain containing 3##AK023263|THUMPD3|25917|THUMP domain containing 3##BC001622|THUMPD3|25917|THUMP domain containing 3##AK001680|THUMPD3|25917|THUMP domain containing 3##BC010421|THUMPD3|25917|THUMP domain containing 3	0.992241	CTCF.p2:9:0.992
chr7	153078797	153078903	reg1023547.p1	5.426	+	TSC_hg19_v1_chr7_+_152456872 NM_001040135 NM_020445 AK315534 BC008682 AK294292 AK316078 AF086920 BC015207 AF023453 CU677239 CU679037 DQ894754 EU176295	-621957	+	AB590731 CU692064 TSC_hg19_v1_chr7_-_152373227 BC042137 AK313607 Y08837 AF035587 NM_005431	-705642	-	TSC_hg19_v1_chr7_+_152161285 BC036622	-917611	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	505550	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	670908	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	923535	+	NM_001040135|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##NM_020445|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK315534|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC008682|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK294292|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK316078|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF086920|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC015207|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF023453|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##DQ894754|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##EU176295|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC042137|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AK313607|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##Y08837|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AF035587|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##NM_005431|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##BC036622|LOC100128822|100128822|uncharacterized LOC100128822##BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6	0.996296	CTCF.p2:-20:0.996
chr13	27845199	27845305	reg1024757.p2	5.425	+	TSC_hg19_v1_chr13_+_27844966 HQ258126	-245	+	AY439004 NM_206827	-789	+	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	-19510	+	BC143711 D32257 NM_002097 TSC_hg19_v1_chr13_+_27998761 AB590496 U14134 U20272	153519	+	TSC_hg19_v1_chr13_-_28024327 BC039599 NM_001166262 NM_001166261	179057	-	AF265440 TSC_hg19_v1_chr13_-_28024702 BC046166 NM_001166263 NM_152912	179470	-	HQ258126|RASL11A|387496|RAS-like, family 11, member A##AY439004|RASL11A|387496|RAS-like, family 11, member A##NM_206827|RASL11A|387496|RAS-like, family 11, member A##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21##BC143711|GTF3A|2971|general transcription factor IIIA##D32257|GTF3A|2971|general transcription factor IIIA##NM_002097|GTF3A|2971|general transcription factor IIIA##U14134|GTF3A|2971|general transcription factor IIIA##U20272|GTF3A|2971|general transcription factor IIIA##BC039599|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166262|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166261|MTIF3|219402|mitochondrial translational initiation factor 3##BC046166|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166263|MTIF3|219402|mitochondrial translational initiation factor 3##NM_152912|MTIF3|219402|mitochondrial translational initiation factor 3	0.0	
chr3	36582533	36582631	reg1025755.p1	5.425	+	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	-160530	+	BC017805 NM_198399 BC066651 BC036548	-860123	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	-861386	+	NM_033403	198769	-	TSC_hg19_v1_chr3_-_36986546 NM_014831	403988	-	AB385383 CU687938 TSC_hg19_v1_chr3_-_37034574	451989	-	AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain##BC017805|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_198399|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC066651|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC036548|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_033403|DCLK3|85443|doublecortin-like kinase 3##NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1	0.102208	
chr7	37488439	37488555	reg1024946.p1	5.425	+	TSC_hg19_v1_chr7_-_37488468 AL136787 AK001084 AK314349	-29	-	AK291784 NM_001206482	-95226	-	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	-462777	-	NM_014800 TSC_hg19_v1_chr7_-_37488556	58	-	NM_001206480	397	-	BC043356 TSC_hg19_v1_chr7_+_37723380	234885	+	AL136787|ELMO1|9844|engulfment and cell motility 1##AK001084|ELMO1|9844|engulfment and cell motility 1##AK314349|ELMO1|9844|engulfment and cell motility 1##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1##D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##NM_014800|ELMO1|9844|engulfment and cell motility 1##NM_001206480|ELMO1|9844|engulfment and cell motility 1	0.665822	CTCF.p2:30:0.666
chrX	54812462	54812597	reg1029692.p1	5.425	+	TSC_hg19_v1_chrX_+_54556746 BC003603 BC011720	-255788	+	TSC_hg19_v1_chrX_+_54556670 AK001475 NM_001184819 NM_019067	-255869	+	TSC_hg19_v1_chrX_-_54522668 AK299635 AK226117 NM_004463 U11690	-289933	-	AY358170 NM_198510	12143	-	TSC_hg19_v1_chrX_+_54834177 NM_177433 AK297910 AK092463 AX747558 AF126181 AF128527 AF128528 AK301821 U92544 BC091503	21627	+	TSC_hg19_v1_chrX_+_54834810 NM_014599 AK098645 BC000304 AK301599	22278	+	BC003603|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##BC011720|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##AK001475|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##NM_001184819|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##NM_019067|GNL3L|54552|guanine nucleotide binding protein-like 3 (nucleolar)-like##AK299635|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##AK226117|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##NM_004463|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##U11690|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##AY358170|ITIH6|347365|inter-alpha-trypsin inhibitor heavy chain family, member 6##NM_198510|ITIH6|347365|inter-alpha-trypsin inhibitor heavy chain family, member 6##NM_177433|MAGED2|10916|melanoma antigen family D, 2##AK297910|MAGED2|10916|melanoma antigen family D, 2##AK092463|MAGED2|10916|melanoma antigen family D, 2##AF126181|MAGED2|10916|melanoma antigen family D, 2##AF128527|MAGED2|10916|melanoma antigen family D, 2##AF128528|MAGED2|10916|melanoma antigen family D, 2##AK301821|MAGED2|10916|melanoma antigen family D, 2##U92544|MAGED2|10916|melanoma antigen family D, 2##BC091503|MAGED2|10916|melanoma antigen family D, 2##NM_014599|MAGED2|10916|melanoma antigen family D, 2##AK098645|MAGED2|10916|melanoma antigen family D, 2##BC000304|MAGED2|10916|melanoma antigen family D, 2##AK301599|MAGED2|10916|melanoma antigen family D, 2	0.846661	CTCF.p2:7:0.847
chr4	35936116	35936246	reg1024770.p2	5.424	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-5213722	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-5213987	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-5214182	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	309856	-	AK131492 NM_001136536 AK304357 AK316523	347065	+	BC157885 NM_001170700	349462	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.975009	CTCF.p2:26:0.975
chr9	130180427	130180542	reg1026199.p1	5.424	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	-21038	+	NM_032293 AK293732 AK095679	-153677	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-295454	-	TSC_hg19_v1_chr9_-_130186602 AK124330	6082	-	NM_007135 TSC_hg19_v1_chr9_+_130186700 AK054606 BC062309 AK302284	6197	+	TSC_hg19_v1_chr9_+_130186718 AK316233	6237	+	BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##NM_007135|ZNF79|7633|zinc finger protein 79##AK054606|ZNF79|7633|zinc finger protein 79##BC062309|ZNF79|7633|zinc finger protein 79##AK302284|ZNF79|7633|zinc finger protein 79##AK316233|ZNF79|7633|zinc finger protein 79	0.0	
chr9	98336603	98336698	reg1026338.p2	5.424	+	AB189436 AB189437 NM_001083602 NM_001083603 BC043542	-57358	-	AB212827 AB212828 AB239329 TSC_hg19_v1_chr9_-_98279070	-57646	-	NM_000264 TSC_hg19_v1_chr9_-_98270933	-65766	-	TSC_hg19_v1_chr9_-_98637744 AF170307	301102	-	TSC_hg19_v1_chr9_-_98637839 AK092137 AX747374	301203	-	NM_001010895 TSC_hg19_v1_chr9_+_98637942 AK129624 AK308409 AL389953	301291	+	AB189436|PTCH1|5727|patched 1##AB189437|PTCH1|5727|patched 1##NM_001083602|PTCH1|5727|patched 1##NM_001083603|PTCH1|5727|patched 1##BC043542|PTCH1|5727|patched 1##AB212827|PTCH1|5727|patched 1##AB212828|PTCH1|5727|patched 1##AB239329|PTCH1|5727|patched 1##NM_000264|PTCH1|5727|patched 1##AF170307|LINC00476|100128782|long intergenic non-protein coding RNA 476##AK092137|LINC00476|100128782|long intergenic non-protein coding RNA 476##NM_001010895|C9orf102|375748|chromosome 9 open reading frame 102##AK308409|C9orf102|375748|chromosome 9 open reading frame 102##AL389953|C9orf102|375748|chromosome 9 open reading frame 102	0.118258	
chr17	38755702	38755883	reg1016597.p3	5.423	+	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	-34074	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	-97946	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-155973	+	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	48278	-	BC069196 TSC_hg19_v1_chr17_-_38804818	49004	-	BX538083 EU832123 EU832217 BC032815 AK092967 AK308598 NM_152349	65558	-	BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC069196|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BX538083|KRT222|125113|keratin 222##EU832123|KRT222|125113|keratin 222##EU832217|KRT222|125113|keratin 222##BC032815|KRT222|125113|keratin 222##AK308598|KRT222|125113|keratin 222##NM_152349|KRT222|125113|keratin 222	0.0	
chr18	52314556	52314684	reg1030177.p1	5.423	+	AK096425 NM_173629	-56231	+	BX640877 NM_173529	-429450	+	AB528241 AF480305 NM_139171	-433678	-	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	181118	+	AK058097 NM_001143829	310658	-	AF273051 TSC_hg19_v1_chr18_-_52626693 BC029508 NM_025214	312067	-	AK096425|C18orf26|284254|chromosome 18 open reading frame 26##NM_173629|C18orf26|284254|chromosome 18 open reading frame 26##BX640877|C18orf54|162681|chromosome 18 open reading frame 54##NM_173529|C18orf54|162681|chromosome 18 open reading frame 54##AF480305|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_139171|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family##AK058097|CCDC68|80323|coiled-coil domain containing 68##NM_001143829|CCDC68|80323|coiled-coil domain containing 68##AF273051|CCDC68|80323|coiled-coil domain containing 68##BC029508|CCDC68|80323|coiled-coil domain containing 68##NM_025214|CCDC68|80323|coiled-coil domain containing 68	0.416774	CTCF.p2:1:0.378
chr3	32218872	32218993	reg1024343.p1	5.423	+	TSC_hg19_v1_chr3_+_32148151 BC028726 AK292808 AB385275	-70764	+	TSC_hg19_v1_chr3_+_32148004 NM_015141 D42047	-70911	+	AF392451 NM_001174060 NM_017784	-195643	-	TSC_hg19_v1_chr3_+_32280171 AF474370 AY598783 NM_178868	61233	+	TSC_hg19_v1_chr3_+_32280215 BC041390	61287	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	214237	+	BC028726|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AK292808|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##NM_015141|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##D42047|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AF392451|OSBPL10|114884|oxysterol binding protein-like 10##NM_001174060|OSBPL10|114884|oxysterol binding protein-like 10##NM_017784|OSBPL10|114884|oxysterol binding protein-like 10##AF474370|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AY598783|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##NM_178868|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7	0.649685	CTCF.p2:-18:0.650
chr4	2801369	2801548	reg1026094.p2	5.423	+	AK312286 TSC_hg19_v1_chr4_+_2794811 AK307106	-6636	+	TSC_hg19_v1_chr4_+_2794755 AK225497 NM_001122681 BC022996	-6723	+	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	-43395	-	NM_001145855 TSC_hg19_v1_chr4_+_2813962	12496	+	TSC_hg19_v1_chr4_+_2813973 AK299996 AK304752	12547	+	TSC_hg19_v1_chr4_+_2819914 NM_001145856 U56386	18455	+	AK312286|SH3BP2|6452|SH3-domain binding protein 2##AK307106|SH3BP2|6452|SH3-domain binding protein 2##AK225497|SH3BP2|6452|SH3-domain binding protein 2##NM_001122681|SH3BP2|6452|SH3-domain binding protein 2##BC022996|SH3BP2|6452|SH3-domain binding protein 2##AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001145855|SH3BP2|6452|SH3-domain binding protein 2##AK299996|SH3BP2|6452|SH3-domain binding protein 2##AK304752|SH3BP2|6452|SH3-domain binding protein 2##NM_001145856|SH3BP2|6452|SH3-domain binding protein 2##U56386|SH3BP2|6452|SH3-domain binding protein 2	0.0	
chr10	73144303	73144410	reg1002187.p2	5.422	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-65310	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-65331	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-171976	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	12382	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	335236	-	AK074172 NM_001168390	353224	-	BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105	0.35356	CTCF.p2:41:0.340
chr22	20460753	20460893	reg1024669.p1	5.422	+	BC072398 TSC_hg19_v1_chr22_-_20427830	-32993	-	NM_001242313	-83155	+	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	-153254	-	NM_015672	962	-	TSC_hg19_v1_chr22_+_20748463 BC056902 X92715 AK291358 AK299569 NM_003426 BC048295 BC013741	287622	+	AB052951 TSC_hg19_v1_chr22_-_20792077	331239	-	BC072398|PI4KAP1|728233|phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1##NM_001242313|TMEM191B|728229|transmembrane protein 191B##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_015672|RIMBP3|85376|RIMS binding protein 3##BC056902|ZNF74|7625|zinc finger protein 74##X92715|ZNF74|7625|zinc finger protein 74##AK291358|ZNF74|7625|zinc finger protein 74##AK299569|ZNF74|7625|zinc finger protein 74##NM_003426|ZNF74|7625|zinc finger protein 74##BC048295|ZNF74|7625|zinc finger protein 74##BC013741|ZNF74|7625|zinc finger protein 74##AB052951|SCARF2|91179|scavenger receptor class F, member 2	0.042788	
chr5	32531746	32531893	reg1027351.p1	5.422	+	TSC_hg19_v1_chr5_-_32444845 AK292214 AK309638 BC017879 NM_016107	-86883	-	TSC_hg19_v1_chr5_-_32444820 BC107417 AJ314790 BC030540 BC137084 BC137085	-87041	-	TSC_hg19_v1_chr5_-_32403324 BC062986 BC051893	-128466	-	NM_006713 TSC_hg19_v1_chr5_+_32585676 AK294124 AK311754 BC022339 AK307268 BC009610 BC018189 BC071655 BC063402 BC010537 BC105972 AB209285	53837	+	NM_001204376 AK300094 AK308301	178931	+	AK290870 NM_000908 NM_001204375 M59305	179669	+	AK292214|ZFR|51663|zinc finger RNA binding protein##AK309638|ZFR|51663|zinc finger RNA binding protein##BC017879|ZFR|51663|zinc finger RNA binding protein##NM_016107|ZFR|51663|zinc finger RNA binding protein##BC107417|ZFR|51663|zinc finger RNA binding protein##AJ314790|ZFR|51663|zinc finger RNA binding protein##BC030540|ZFR|51663|zinc finger RNA binding protein##BC137084|ZFR|51663|zinc finger RNA binding protein##BC137085|ZFR|51663|zinc finger RNA binding protein##BC062986|ZFR|51663|zinc finger RNA binding protein##BC051893|ZFR|51663|zinc finger RNA binding protein##NM_006713|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK294124|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK311754|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC022339|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK307268|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC009610|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC018189|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC071655|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC063402|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC010537|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC105972|SUB1|10923|SUB1 homolog (S. cerevisiae)##AB209285|SUB1|10923|SUB1 homolog (S. cerevisiae)##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)	0.0	
chr10	29802071	29802171	reg1024277.p1	5.421	+	BX648589 TSC_hg19_v1_chr10_-_29754623	-47570	-	BC031656 TSC_hg19_v1_chr10_+_29698527 BC063483 AL832706	-103604	+	TSC_hg19_v1_chr10_+_29698496 BC073888	-103623	+	TSC_hg19_v1_chr10_-_29923841 BC057241 BC070247	121740	-	AF109135 NM_021738 TSC_hg19_v1_chr10_-_29923901	121786	-	TSC_hg19_v1_chr10_-_30024866 AF051850 NM_003174	222643	-	BX648589|SVIL|6840|supervillin##BC031656|LOC387647|387647|patched domain containing 3 pseudogene##BC063483|LOC387647|387647|patched domain containing 3 pseudogene##AL832706|LOC387647|387647|patched domain containing 3 pseudogene##BC073888|LOC387647|387647|patched domain containing 3 pseudogene##AF109135|SVIL|6840|supervillin##NM_021738|SVIL|6840|supervillin##AF051850|SVIL|6840|supervillin##NM_003174|SVIL|6840|supervillin	0.151284	
chr16	66638791	66638879	reg1026103.p2	5.421	+	TSC_hg19_v1_chr16_+_66638658 BC023509 BC023591	-155	+	TSC_hg19_v1_chr16_+_66638636 AY166714	-194	+	TSC_hg19_v1_chr16_+_66638606 BC047701 NM_181553 BC036042 BC040227	-261	+	TSC_hg19_v1_chr16_-_66730647 BC093679 AF479814 AF521889 AF521890 NM_178818 NM_181521	91797	-	TSC_hg19_v1_chr16_-_66785505 AK304233 AF035812 BC025959 AK291766 AK303031 BX648863	146657	-	BC010928 TSC_hg19_v1_chr16_-_66785513 AK295049 NM_006141	146727	-	BC023509|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC023591|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC047701|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##NM_181553|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC036042|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC040227|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC093679|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF479814|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521889|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521890|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_178818|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_181521|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AK304233|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AF035812|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC025959|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK291766|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK303031|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BX648863|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC010928|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK295049|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##NM_006141|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2	0.981923	CTCF.p2:6:0.982
chr19	58428060	58428174	reg1023013.p1	5.421	+	TSC_hg19_v1_chr19_-_58427961 BC025783 AK293789 BC103757 NM_152475	-145	-	BC056684 AF086563 AK022663 TSC_hg19_v1_chr19_-_58400401 AK300483 NM_001144989	-27753	-	TSC_hg19_v1_chr19_+_58361226 AK027616 BC126237 BC126239 BC144112 BC144113 AB464407	-66805	+	AK056113 AY695825 NM_133460 AK304632 AK293723	18629	-	TSC_hg19_v1_chr19_-_58459075 BC001438 AK314094 NM_005773	30945	-	BC033933 NM_152474	57784	-	BC025783|ZNF417|147687|zinc finger protein 417##AK293789|ZNF417|147687|zinc finger protein 417##BC103757|ZNF417|147687|zinc finger protein 417##NM_152475|ZNF417|147687|zinc finger protein 417##BC056684|ZNF814|730051|zinc finger protein 814##AF086563|ZNF814|730051|zinc finger protein 814##AK022663|ZNF814|730051|zinc finger protein 814##AK300483|ZNF814|730051|zinc finger protein 814##NM_001144989|ZNF814|730051|zinc finger protein 814##AK027616|ZNF587|84914|zinc finger protein 587##BC126237|ZNF587|84914|zinc finger protein 587##BC126239|ZNF587|84914|zinc finger protein 587##BC144112|ZNF587|84914|zinc finger protein 587##BC144113|ZNF587|84914|zinc finger protein 587##AK056113|ZNF418|147686|zinc finger protein 418##AY695825|ZNF418|147686|zinc finger protein 418##NM_133460|ZNF418|147686|zinc finger protein 418##AK304632|ZNF418|147686|zinc finger protein 418##AK293723|ZNF418|147686|zinc finger protein 418##BC001438|ZNF256|10172|zinc finger protein 256##AK314094|ZNF256|10172|zinc finger protein 256##NM_005773|ZNF256|10172|zinc finger protein 256##BC033933|C19orf18|147685|chromosome 19 open reading frame 18##NM_152474|C19orf18|147685|chromosome 19 open reading frame 18	0.078859	
chr3	55658375	55658497	reg1023681.p2	5.421	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-136818	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-137104	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-143028	-	BC111550 BC112391 AB002376 NM_015576	843941	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	932766	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	932810	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.0	
chr7	45620330	45620434	reg1023106.p1	5.421	+	AB209496 TSC_hg19_v1_chr7_+_45614187	-6183	+	TSC_hg19_v1_chr7_+_45614105 AF497515 NM_021116	-6280	+	NM_005856 TSC_hg19_v1_chr7_+_45197392 AJ001016 BC022304 BC053852 AK222469 DQ891371 CU691036 AK311871 AY265459	-422986	+	TSC_hg19_v1_chr7_-_45808577 AL832059 BC092503	188208	-	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	307723	+	AF042356 TSC_hg19_v1_chr7_+_45933167	312752	+	AB209496|ADCY1|107|adenylate cyclase 1 (brain)##AF497515|ADCY1|107|adenylate cyclase 1 (brain)##NM_021116|ADCY1|107|adenylate cyclase 1 (brain)##NM_005856|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AJ001016|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC022304|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC053852|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK222469|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##DQ891371|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK311871|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AY265459|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AL832059|SEPT7P2|641977|septin 7 pseudogene 2##BC092503|SEPT7P2|641977|septin 7 pseudogene 2##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1	0.807449	CTCF.p2:1:0.752
chr8	101912765	101912927	reg1026138.p2	5.421	+	BC041863 TSC_hg19_v1_chr8_-_101734972	-177880	-	Y00345 TSC_hg19_v1_chr8_-_101734316 AK130523 AK303120 NM_002568	-178529	-	BC015958 BC023217 BC023520 TSC_hg19_v1_chr8_-_101734301	-178551	-	TSC_hg19_v1_chr8_-_101936525 DQ185048	23678	-	TSC_hg19_v1_chr8_-_101962797 NM_001135702	49953	-	TSC_hg19_v1_chr8_-_101963538 NM_001135700 NM_001135701	50616	-	BC041863|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##Y00345|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK130523|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##AK303120|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##NM_002568|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC015958|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023217|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##BC023520|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ185048|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135702|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135700|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135701|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	0.0	
chr10	35125228	35125409	reg1025278.p2	5.420	+	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	-21167	-	TSC_hg19_v1_chr10_-_33623996 BX648025	-1501320	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1501504	-	AK310225 AK300491 NM_001198778 NM_001198779	237894	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	253954	-	TSC_hg19_v1_chr10_-_35379513 BC095405 BC110901 AL832733 AK095217 NM_001198777	254206	-	AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2##BC095405|CUL2|8453|cullin 2##BC110901|CUL2|8453|cullin 2##AL832733|CUL2|8453|cullin 2##AK095217|CUL2|8453|cullin 2##NM_001198777|CUL2|8453|cullin 2	0.020608	
chr12	125053177	125053333	reg1024224.p1	5.420	+	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	-1180	-	TSC_hg19_v1_chr12_-_125002875 BC033087	-50396	-	AK126577 NM_181709	-279546	+	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	295050	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	295122	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	295218	-	AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1	1.016689	CTCF.p2:-29:0.997
chr15	52758523	52758703	reg1023030.p2	5.420	+	AF272390 BC144611 BC064841 TSC_hg19_v1_chr15_-_52587968 AK301079 AK304136 NM_018728	-170679	-	AF161352 TSC_hg19_v1_chr15_-_52529707	-228907	-	NM_016194	-275049	-	TSC_hg19_v1_chr15_-_52821078 AB290180 AK303660 AK307600 NM_000259 NM_001142495 U90942 Y07759	62643	-	AK123616 TSC_hg19_v1_chr15_-_52861045 AJ223091 CR457132 AK311751	102446	-	TSC_hg19_v1_chr15_-_52861228 AF084555 BC003418 NM_006628	102619	-	AF272390|MYO5C|55930|myosin VC##BC144611|MYO5C|55930|myosin VC##BC064841|MYO5C|55930|myosin VC##AK301079|MYO5C|55930|myosin VC##AK304136|MYO5C|55930|myosin VC##NM_018728|MYO5C|55930|myosin VC##AF161352|MYO5C|55930|myosin VC##NM_016194|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AB290180|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK303660|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK307600|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_000259|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_001142495|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##U90942|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##Y07759|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK123616|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AJ223091|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##CR457132|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK311751|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AF084555|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC003418|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##NM_006628|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa	0.032156	
chr17	78098234	78098328	reg1027104.p1	5.420	+	TSC_hg19_v1_chr17_+_78075395 BC040431 BC065262 Y00839	-22811	+	AK299462 TSC_hg19_v1_chr17_+_78075368	-22917	+	TSC_hg19_v1_chr17_+_78075349 NM_000152 NM_001079803 NM_001079804	-22955	+	CR456750 CU678566 AB383751 X79538 BC003662 BC004386 BC011151 TSC_hg19_v1_chr17_-_78120947 AK290608 NM_014740	22589	-	AF322642 NM_024110 BC018142	54007	+	BC001326 NM_052819	63317	+	BC040431|GAA|2548|glucosidase, alpha; acid##Y00839|GAA|2548|glucosidase, alpha; acid##AK299462|GAA|2548|glucosidase, alpha; acid##NM_000152|GAA|2548|glucosidase, alpha; acid##NM_001079803|GAA|2548|glucosidase, alpha; acid##NM_001079804|GAA|2548|glucosidase, alpha; acid##CR456750|EIF4A3|9775|eukaryotic translation initiation factor 4A3##X79538|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC003662|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC004386|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC011151|EIF4A3|9775|eukaryotic translation initiation factor 4A3##AK290608|EIF4A3|9775|eukaryotic translation initiation factor 4A3##NM_014740|EIF4A3|9775|eukaryotic translation initiation factor 4A3##AF322642|CARD14|79092|caspase recruitment domain family, member 14##NM_024110|CARD14|79092|caspase recruitment domain family, member 14##BC018142|CARD14|79092|caspase recruitment domain family, member 14##BC001326|CARD14|79092|caspase recruitment domain family, member 14##NM_052819|CARD14|79092|caspase recruitment domain family, member 14	0.079692	
chr19	10216363	10216510	reg1023293.p2	5.420	+	AY358276 BC142632 AB054064 NM_031917 AF230330	-3036	-	TSC_hg19_v1_chr19_+_10197045 AL137694 CU690214	-19374	+	BC026180 TSC_hg19_v1_chr19_+_10197007 AK002148 BC010847 BC035817	-19439	+	BC171852 NM_001040664 NM_001198690 NM_020230 BC033202 TSC_hg19_v1_chr19_+_10217035 BC009833 AJ292529 CU679511 AJ300588	553	+	NM_002566 BC073827	5768	+	AB528489 BT006889 CR457134 CU678971 DQ890616 DQ896801 AF020833 U96074 TSC_hg19_v1_chr19_-_10230579 AK293374 AF094850 AK309944 AK316040 AK291320 BC000733 BC008469 AK316335 AK315896 AK296377 AK311624 NM_003755	14130	-	AY358276|ANGPTL6|83854|angiopoietin-like 6##BC142632|ANGPTL6|83854|angiopoietin-like 6##AB054064|ANGPTL6|83854|angiopoietin-like 6##NM_031917|ANGPTL6|83854|angiopoietin-like 6##AF230330|ANGPTL6|83854|angiopoietin-like 6##AL137694|C19orf66|55337|chromosome 19 open reading frame 66##BC026180|C19orf66|55337|chromosome 19 open reading frame 66##AK002148|C19orf66|55337|chromosome 19 open reading frame 66##BC010847|C19orf66|55337|chromosome 19 open reading frame 66##BC035817|C19orf66|55337|chromosome 19 open reading frame 66##BC171852|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001040664|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001198690|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_020230|PPAN|56342|peter pan homolog (Drosophila)##BC033202|PPAN|56342|peter pan homolog (Drosophila)##BC009833|PPAN|56342|peter pan homolog (Drosophila)##AJ292529|PPAN|56342|peter pan homolog (Drosophila)##AJ300588|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_002566|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BC073827|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BT006889|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##CR457134|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##DQ890616|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##DQ896801|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AF020833|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##U96074|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK293374|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AF094850|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK309944|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK316040|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK291320|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##BC000733|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##BC008469|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK316335|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK315896|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK296377|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##NM_003755|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G	0.0	
chr22	49701212	49701315	reg1026405.p1	5.420	+	AK125256 NM_015381 AK123443 AY358847	-729102	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	-815983	+	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	-1673760	+	AK124962 TSC_hg19_v1_chr22_-_50051168 BC033837 BC048207	349870	-	AF005067 NM_014577	517188	-	AK292428 TSC_hg19_v1_chr22_-_50221332 BC030007 BC047508	520003	-	AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK093107|LOC284930|284930|uncharacterized LOC284930##AK124962|C22orf34|348645|chromosome 22 open reading frame 34##BC048207|C22orf34|348645|chromosome 22 open reading frame 34##AF005067|BRD1|23774|bromodomain containing 1##NM_014577|BRD1|23774|bromodomain containing 1##AK292428|BRD1|23774|bromodomain containing 1##BC030007|BRD1|23774|bromodomain containing 1##BC047508|BRD1|23774|bromodomain containing 1	0.999789	CTCF.p2:11:1.000
chr5	2038663	2038828	reg1013459.p1	5.420	+	AB527533 BC110912 BC144204 BC136505 BC136506 AF124733 NM_016358	-155924	-	TSC_hg19_v1_chr5_+_1801520 NM_004553 AK022503 BC038664 AF044959 BC046155 CR456880 HQ257915	-237233	+	TSC_hg19_v1_chr5_-_1799952 AK312001 BC104652 EF036487 NM_032479	-238773	-	AB188492 NM_001134222 NM_033267 BC065189	713026	-	AY249325 NM_178569 BC101608 BC101634 BC143638 BC143639 BC143640 BC171731	713556	+	AY335938 NM_024337	1557422	+	BC110912|IRX4|50805|iroquois homeobox 4##BC144204|IRX4|50805|iroquois homeobox 4##BC136505|IRX4|50805|iroquois homeobox 4##BC136506|IRX4|50805|iroquois homeobox 4##AF124733|IRX4|50805|iroquois homeobox 4##NM_016358|IRX4|50805|iroquois homeobox 4##NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK312001|MRPL36|64979|mitochondrial ribosomal protein L36##BC104652|MRPL36|64979|mitochondrial ribosomal protein L36##EF036487|MRPL36|64979|mitochondrial ribosomal protein L36##NM_032479|MRPL36|64979|mitochondrial ribosomal protein L36##AB188492|IRX2|153572|iroquois homeobox 2##NM_001134222|IRX2|153572|iroquois homeobox 2##NM_033267|IRX2|153572|iroquois homeobox 2##BC065189|IRX2|153572|iroquois homeobox 2##AY249325|C5orf38|153571|chromosome 5 open reading frame 38##NM_178569|C5orf38|153571|chromosome 5 open reading frame 38##BC101608|C5orf38|153571|chromosome 5 open reading frame 38##BC101634|C5orf38|153571|chromosome 5 open reading frame 38##BC143638|C5orf38|153571|chromosome 5 open reading frame 38##BC143639|C5orf38|153571|chromosome 5 open reading frame 38##BC143640|C5orf38|153571|chromosome 5 open reading frame 38##BC171731|C5orf38|153571|chromosome 5 open reading frame 38##AY335938|IRX1|79192|iroquois homeobox 1##NM_024337|IRX1|79192|iroquois homeobox 1	0.911531	CTCF.p2:-35:0.886
chr6	13259651	13259831	reg1020747.p1	5.420	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-542698	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-542798	+	TSC_hg19_v1_chr6_+_12514301 D28417	-745439	+	AK091836 AX747210 NM_001242698	36076	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	68959	-	AK027010 NM_001242630	148627	-	AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr7	64090946	64091047	reg1027143.p1	5.420	+	TSC_hg19_v1_chr7_-_64023456 AK122937 BC030700 NM_001130022 NM_178558	-67517	-	TSC_hg19_v1_chr7_-_64023450 AK094476	-67549	-	AB529206 EU832109 EU832203 TSC_hg19_v1_chr7_-_64023424 AK131240	-67618	-	TSC_hg19_v1_chr7_+_64126510 AK303931 BC017809 NM_001013746 NM_016220 BC047243	35531	+	TSC_hg19_v1_chr7_+_64254799 NM_001160183 NM_006524 AK294302 AK298230 AK055644 BC141847 BC037426	163819	+	AK090648 AX746558 TSC_hg19_v1_chr7_+_64342925	251906	+	AK122937|ZNF680|340252|zinc finger protein 680##BC030700|ZNF680|340252|zinc finger protein 680##NM_001130022|ZNF680|340252|zinc finger protein 680##NM_178558|ZNF680|340252|zinc finger protein 680##EU832109|ZNF680|340252|zinc finger protein 680##EU832203|ZNF680|340252|zinc finger protein 680##AK131240|ZNF680|340252|zinc finger protein 680##AK303931|ZNF107|51427|zinc finger protein 107##BC017809|ZNF107|51427|zinc finger protein 107##NM_001013746|ZNF107|51427|zinc finger protein 107##NM_016220|ZNF107|51427|zinc finger protein 107##BC047243|ZNF107|51427|zinc finger protein 107##NM_001160183|ZNF138|7697|zinc finger protein 138##NM_006524|ZNF138|7697|zinc finger protein 138##AK294302|ZNF138|7697|zinc finger protein 138##AK298230|ZNF138|7697|zinc finger protein 138##AK055644|ZNF138|7697|zinc finger protein 138##BC141847|ZNF138|7697|zinc finger protein 138##BC037426|ZNF138|7697|zinc finger protein 138##AK090648|ZNF273|10793|zinc finger protein 273	0.674629	CTCF.p2:-17:0.675
chr9	78790117	78790188	reg1016805.p1	5.420	+	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	-284517	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	-1086642	+	TSC_hg19_v1_chr9_+_77703406 NM_012383	-1086752	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	219239	-	AY196293 NM_001097634	266429	+	NM_001097633 NM_001490 TSC_hg19_v1_chr9_+_79074142 AY196294 AY196295 AL832647	283964	+	NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1##NM_012383|OSTF1|26578|osteoclast stimulating factor 1##BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097633|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001490|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196294|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196295|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AL832647|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.0	
chr1	183250369	183250550	reg1002287.p1	5.419	+	TSC_hg19_v1_chr1_+_183155398 AK296944 X73902 BC112286 BC113378 BC143653	-95040	+	AK307945 Z15008 Z15009 TSC_hg19_v1_chr1_+_183155386	-95086	+	NM_005562 NM_018891 TSC_hg19_v1_chr1_+_183155211	-95267	+	BC020998 NM_170706	23549	-	AB383893 TSC_hg19_v1_chr1_-_183387486	136990	-	AB007948 TSC_hg19_v1_chr1_-_183387507 AK291390 NM_015039 AF288395	137159	-	AK296944|LAMC2|3918|laminin, gamma 2##X73902|LAMC2|3918|laminin, gamma 2##BC112286|LAMC2|3918|laminin, gamma 2##BC113378|LAMC2|3918|laminin, gamma 2##BC143653|LAMC2|3918|laminin, gamma 2##AK307945|LAMC2|3918|laminin, gamma 2##Z15008|LAMC2|3918|laminin, gamma 2##Z15009|LAMC2|3918|laminin, gamma 2##NM_005562|LAMC2|3918|laminin, gamma 2##NM_018891|LAMC2|3918|laminin, gamma 2##BC020998|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##NM_170706|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AB007948|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AK291390|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##NM_015039|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2##AF288395|NMNAT2|23057|nicotinamide nucleotide adenylyltransferase 2	0.618939	CTCF.p2:8:0.619
chr14	93673949	93674052	reg1028446.p2	5.419	+	TSC_hg19_v1_chr14_+_93673628 AB590826 BC051819 BX248249	-366	+	BC017013 TSC_hg19_v1_chr14_+_93673625	-376	+	TSC_hg19_v1_chr14_+_93673600 BC015046 AK315492	-404	+	TSC_hg19_v1_chr14_-_93799368 AB040958 AK001510	125365	-	TSC_hg19_v1_chr14_-_93799376 AK291422 BC141850 BX248762 NM_001002860 NM_018167 BC047071	125404	-	AK125327 NM_020818	125564	+	BC051819|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BX248249|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BC017013|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BC015046|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##AK315492|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##AB040958|BTBD7|55727|BTB (POZ) domain containing 7##AK001510|BTBD7|55727|BTB (POZ) domain containing 7##AK291422|BTBD7|55727|BTB (POZ) domain containing 7##BC141850|BTBD7|55727|BTB (POZ) domain containing 7##BX248762|BTBD7|55727|BTB (POZ) domain containing 7##NM_001002860|BTBD7|55727|BTB (POZ) domain containing 7##NM_018167|BTBD7|55727|BTB (POZ) domain containing 7##BC047071|BTBD7|55727|BTB (POZ) domain containing 7##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)	0.082619	
chr19	51425388	51425568	reg1002134.p1	5.419	+	AF113140 AF259969 AY923170 BC069325 BC069403 BC069429 BC069489 BC096175 BC096176 BC096177 BC096178 CU686804 NM_004917	-11485	-	AK300527 AK309982 BC005196 NM_001002231 NM_005551 AK309985 AK300549 AK300566 AK309973 AY429509 AY429510 AF188745 AF188746 AF188747 S39329 CU675035 AB590372 DQ890672 DQ893853 AF336106 BT006650	-48770	+	AF335477 AF335478 AX772834 AX772836 BC005307 NM_001030047 NM_001030048 NM_001030050 NM_001648 S75755 U17040 X05332 BC056665 AJ310937 AJ459784 AJ310938 AK311887 AK312933 AJ459782 AJ459783 AJ512346 M26663 DQ890670 DQ893851 AB463810 CU690730 BT019862 M21895 M21896 M21897	-67282	+	AF168768 BC008036 AK223421 AF435980 AF435981 AY279380 AY279381 AY359010 NM_001077491 NM_001077492 NM_012427	30773	-	BC015525 AY318868 AY318869 AY318870 AY318867 NM_001012964 NM_001012965	46546	-	AF013988 AK314897 D78203 AY279383 NM_002774 U62801	47394	-	AF113140|KLK4|9622|kallikrein-related peptidase 4##AF259969|KLK4|9622|kallikrein-related peptidase 4##AY923170|KLK4|9622|kallikrein-related peptidase 4##BC069325|KLK4|9622|kallikrein-related peptidase 4##BC069403|KLK4|9622|kallikrein-related peptidase 4##BC069429|KLK4|9622|kallikrein-related peptidase 4##BC069489|KLK4|9622|kallikrein-related peptidase 4##BC096175|KLK4|9622|kallikrein-related peptidase 4##BC096176|KLK4|9622|kallikrein-related peptidase 4##BC096177|KLK4|9622|kallikrein-related peptidase 4##BC096178|KLK4|9622|kallikrein-related peptidase 4##NM_004917|KLK4|9622|kallikrein-related peptidase 4##AK300527|KLK2|3817|kallikrein-related peptidase 2##AK309982|KLK2|3817|kallikrein-related peptidase 2##BC005196|KLK2|3817|kallikrein-related peptidase 2##NM_001002231|KLK2|3817|kallikrein-related peptidase 2##NM_005551|KLK2|3817|kallikrein-related peptidase 2##AK309985|KLK2|3817|kallikrein-related peptidase 2##AK300549|KLK2|3817|kallikrein-related peptidase 2##AK300566|KLK2|3817|kallikrein-related peptidase 2##AK309973|KLK2|3817|kallikrein-related peptidase 2##AY429509|KLK2|3817|kallikrein-related peptidase 2##AY429510|KLK2|3817|kallikrein-related peptidase 2##AF188745|KLK2|3817|kallikrein-related peptidase 2##AF188746|KLK2|3817|kallikrein-related peptidase 2##AF188747|KLK2|3817|kallikrein-related peptidase 2##S39329|KLK2|3817|kallikrein-related peptidase 2##DQ890672|KLK2|3817|kallikrein-related peptidase 2##DQ893853|KLK2|3817|kallikrein-related peptidase 2##AF336106|KLK2|3817|kallikrein-related peptidase 2##BT006650|KLK2|3817|kallikrein-related peptidase 2##AF335477|KLK3|354|kallikrein-related peptidase 3##AF335478|KLK3|354|kallikrein-related peptidase 3##AX772834|KLK3|354|kallikrein-related peptidase 3##BC005307|KLK3|354|kallikrein-related peptidase 3##NM_001030047|KLK3|354|kallikrein-related peptidase 3##NM_001030048|KLK3|354|kallikrein-related peptidase 3##NM_001030050|KLK3|354|kallikrein-related peptidase 3##NM_001648|KLK3|354|kallikrein-related peptidase 3##S75755|KLK3|354|kallikrein-related peptidase 3##U17040|KLK3|354|kallikrein-related peptidase 3##X05332|KLK3|354|kallikrein-related peptidase 3##BC056665|KLK3|354|kallikrein-related peptidase 3##AJ310937|KLK3|354|kallikrein-related peptidase 3##AJ459784|KLK3|354|kallikrein-related peptidase 3##AJ310938|KLK3|354|kallikrein-related peptidase 3##AK312933|KLK3|354|kallikrein-related peptidase 3##AJ459782|KLK3|354|kallikrein-related peptidase 3##AJ459783|KLK3|354|kallikrein-related peptidase 3##AJ512346|KLK3|354|kallikrein-related peptidase 3##M26663|KLK3|354|kallikrein-related peptidase 3##DQ890670|KLK3|354|kallikrein-related peptidase 3##DQ893851|KLK3|354|kallikrein-related peptidase 3##BT019862|KLK3|354|kallikrein-related peptidase 3##M21895|KLK3|354|kallikrein-related peptidase 3##M21896|KLK3|354|kallikrein-related peptidase 3##M21897|KLK3|354|kallikrein-related peptidase 3##AF168768|KLK5|25818|kallikrein-related peptidase 5##BC008036|KLK5|25818|kallikrein-related peptidase 5##AK223421|KLK5|25818|kallikrein-related peptidase 5##AF435980|KLK5|25818|kallikrein-related peptidase 5##AF435981|KLK5|25818|kallikrein-related peptidase 5##AY279380|KLK5|25818|kallikrein-related peptidase 5##AY279381|KLK5|25818|kallikrein-related peptidase 5##AY359010|KLK5|25818|kallikrein-related peptidase 5##NM_001077491|KLK5|25818|kallikrein-related peptidase 5##NM_001077492|KLK5|25818|kallikrein-related peptidase 5##NM_012427|KLK5|25818|kallikrein-related peptidase 5##BC015525|KLK6|5653|kallikrein-related peptidase 6##AY318868|KLK6|5653|kallikrein-related peptidase 6##AY318869|KLK6|5653|kallikrein-related peptidase 6##AY318870|KLK6|5653|kallikrein-related peptidase 6##AY318867|KLK6|5653|kallikrein-related peptidase 6##NM_001012964|KLK6|5653|kallikrein-related peptidase 6##NM_001012965|KLK6|5653|kallikrein-related peptidase 6##AF013988|KLK6|5653|kallikrein-related peptidase 6##AK314897|KLK6|5653|kallikrein-related peptidase 6##D78203|KLK6|5653|kallikrein-related peptidase 6##AY279383|KLK6|5653|kallikrein-related peptidase 6##NM_002774|KLK6|5653|kallikrein-related peptidase 6##U62801|KLK6|5653|kallikrein-related peptidase 6	0.0	
chr6	13278572	13278687	reg1029010.p1	5.419	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-561586	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-561686	+	TSC_hg19_v1_chr6_+_12514301 D28417	-764327	+	AK091836 AX747210 NM_001242698	17188	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	50071	-	AK027010 NM_001242630	129739	-	AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	1.033353	CTCF.p2:0:0.998
chr7	114179747	114179911	reg1027387.p1	5.419	+	AF467253 NM_001172767 NM_148899 U80741 AF467258 AF467259 TSC_hg19_v1_chr7_+_114066703	-113199	+	TSC_hg19_v1_chr7_+_114055253 AF493430 AF337817 AF467257 BC126104 BC143866 BC143867	-124524	+	AK296957 TSC_hg19_v1_chr7_+_114055213	-124637	+	TSC_hg19_v1_chr7_+_114562148 AF054589 NM_001166345 NM_001166346 NM_199072	382345	+	BC040713 TSC_hg19_v1_chr7_+_114562979 AY196485	383127	+	AJ608795 NM_001244583	1428537	-	AF467253|FOXP2|93986|forkhead box P2##NM_001172767|FOXP2|93986|forkhead box P2##NM_148899|FOXP2|93986|forkhead box P2##AF467258|FOXP2|93986|forkhead box P2##AF467259|FOXP2|93986|forkhead box P2##AF493430|FOXP2|93986|forkhead box P2##AF337817|FOXP2|93986|forkhead box P2##AF467257|FOXP2|93986|forkhead box P2##BC126104|FOXP2|93986|forkhead box P2##BC143866|FOXP2|93986|forkhead box P2##BC143867|FOXP2|93986|forkhead box P2##AK296957|FOXP2|93986|forkhead box P2##AF054589|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166345|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166346|MDFIC|29969|MyoD family inhibitor domain containing##NM_199072|MDFIC|29969|MyoD family inhibitor domain containing##BC040713|MDFIC|29969|MyoD family inhibitor domain containing##AY196485|MDFIC|29969|MyoD family inhibitor domain containing##AJ608795|TFEC|22797|transcription factor EC##NM_001244583|TFEC|22797|transcription factor EC	0.070208	
chr7	124956677	124956782	reg1026845.p2	5.419	+	NM_001042594 NM_015450	-386693	-	BC130600 BC130604 NM_001024603	-525927	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	-550933	-	NM_000845	1926839	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	1935636	-	TSC_hg19_v1_chr7_-_126893165 AK290197	1936423	-	NM_001042594|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_015450|POT1|25913|protection of telomeres 1 homolog (S. pombe)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##AK290197|GRM8|2918|glutamate receptor, metabotropic 8	0.0	
chr11	73113950	73114066	reg1029499.p1	5.418	+	TSC_hg19_v1_chr11_+_73087683 AF319553 NM_032871	-26317	+	TSC_hg19_v1_chr11_+_73087471 AK027899 NM_152222 BC051810 BC017279	-26571	+	TSC_hg19_v1_chr11_-_73020422 AK300095	-93585	-	D87470 TSC_hg19_v1_chr11_-_73309158 AK292054 EF197985 BC052341 EF363480 NM_015159	195190	-	AF101054 NM_001130033 NM_021200 U89715	243214	+	NM_001130034 NM_001130035 BC008075 AB209716 AK289620 TSC_hg19_v1_chr11_+_73358695 AK296033 AK301299 AF093249 AF100612 AK289909 AK311158	244655	+	AF319553|RELT|84957|RELT tumor necrosis factor receptor##NM_032871|RELT|84957|RELT tumor necrosis factor receptor##AK027899|RELT|84957|RELT tumor necrosis factor receptor##NM_152222|RELT|84957|RELT tumor necrosis factor receptor##BC051810|RELT|84957|RELT tumor necrosis factor receptor##BC017279|RELT|84957|RELT tumor necrosis factor receptor##AK300095|LOC100287837|100287837|uncharacterized LOC100287837##D87470|FAM168A|23201|family with sequence similarity 168, member A##AK292054|FAM168A|23201|family with sequence similarity 168, member A##EF197985|FAM168A|23201|family with sequence similarity 168, member A##BC052341|FAM168A|23201|family with sequence similarity 168, member A##EF363480|FAM168A|23201|family with sequence similarity 168, member A##NM_015159|FAM168A|23201|family with sequence similarity 168, member A##AF101054|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_021200|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##U89715|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130034|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130035|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##BC008075|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AB209716|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289620|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK296033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK301299|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF093249|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF100612|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289909|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK311158|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1	0.99476	CTCF.p2:7:0.995
chr15	78423892	78423995	reg1008034.p2	5.418	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	-181	-	NM_001101404	-39017	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	-53990	-	TSC_hg19_v1_chr15_+_78441718 AK299970 AK096721 AK296002 BC036227 NM_005530 AK315963 CR749548 BC021967 AK316051	17762	+	TSC_hg19_v1_chr15_+_78441734 AK222973	17791	+	TSC_hg19_v1_chr15_+_78441739 U07681 AB529210 CU692430 DQ892774 DQ893529 DQ896022	17811	+	BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2##NM_001101404|SH2D7|646892|SH2 domain containing 7##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##AK299970|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK296002|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC036227|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##NM_005530|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK315963|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##CR749548|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC021967|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK316051|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK222973|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##U07681|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ892774|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ893529|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##DQ896022|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha	0.0	
chrX	140372545	140372674	reg1027049.p1	5.418	+	AJ238277 NM_022661 BC054023 AK225988	-35972	-	TSC_hg19_v1_chrX_-_140271298 AB019527 HQ343285 NM_012317	-101308	-	TSC_hg19_v1_chrX_-_140271282 BC003104	-101329	-	AB590986 AY920732 AY920733 AY920735 AY920736 AY920737 AY920737 AY920738 AY920739 AY920741 AY920742 AY920743 AY920744 AY920745 AY920746 AF098306 BC069393 BC069816 NM_013453 NM_145662	300220	-	NM_145662 AF098306 BC069393 BC069816 NM_013453 AB590986 AY920732 AY920733 AY920735 AY920736 AY920738 AY920739 AY920741 AY920742 AY920743 AY920744 AY920745 AY920746	305255	+	AY920734 AY920740 EU447010 AF312765 BC103960 BC103961 AJ457795 NM_032417 BC121070 BC134418 BC005382 NM_145665	413998	-	AJ238277|SPANXC|64663|SPANX family, member C##NM_022661|SPANXC|64663|SPANX family, member C##BC054023|SPANXC|64663|SPANX family, member C##AK225988|SPANXC|64663|SPANX family, member C##AB019527|LDOC1|23641|leucine zipper, down-regulated in cancer 1##NM_012317|LDOC1|23641|leucine zipper, down-regulated in cancer 1##BC003104|LDOC1|23641|leucine zipper, down-regulated in cancer 1##AY920732|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920733|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920735|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920736|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920737|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920737|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920738|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920739|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920741|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920742|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920743|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920744|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920745|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920746|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AF098306|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##BC069393|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##BC069816|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##NM_013453|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##NM_145662|SPANXA2|728712|SPANX family, member A2##NM_145662|SPANXA2|728712|SPANX family, member A2##AF098306|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##BC069393|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##BC069816|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##NM_013453|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920732|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920733|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920735|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920736|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920738|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920739|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920741|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920742|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920743|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920744|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920745|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920746|SPANXA1|30014|sperm protein associated with the nucleus, X-linked, family member A1##AY920734|SPANXD|64648|SPANX family, member D##AY920740|SPANXE|171489|SPANX family, member E##EU447010|SPANXA2|728712|SPANX family, member A2##AF312765|SPANXD|64648|SPANX family, member D##BC103961|SPANXD|64648|SPANX family, member D##AJ457795|SPANXE|171489|SPANX family, member E##NM_032417|SPANXD|64648|SPANX family, member D##BC121070|SPANXD|64648|SPANX family, member D##BC134418|SPANXD|64648|SPANX family, member D##BC005382|SPANXE|171489|SPANX family, member E##NM_145665|SPANXE|171489|SPANX family, member E	0.99804	CTCF.p2:14:0.998
chrX	9281376	9281499	reg1025441.p2	5.418	+	BC120955 BC120956 NM_205849	-280335	-	BC113449 BC143805 NM_001171186 BC112022 AF494343 NM_174951	-512037	-	TSC_hg19_v1_chrX_-_8700193 BC137426 BC137427 M97252 NM_000216 S60085	-581230	-	TSC_hg19_v1_chrX_+_9431357 AK289409 NM_001139466 NM_001139467 NM_001139468 AK290962 BC032708	149910	+	TSC_hg19_v1_chrX_+_9433108 Y12781 BC052304 NM_005647	151797	+	Z48804 BC015657 BC068977 NM_000273	452523	-	BC120955|FAM9B|171483|family with sequence similarity 9, member B##BC120956|FAM9B|171483|family with sequence similarity 9, member B##NM_205849|FAM9B|171483|family with sequence similarity 9, member B##BC113449|FAM9A|171482|family with sequence similarity 9, member A##BC143805|FAM9A|171482|family with sequence similarity 9, member A##NM_001171186|FAM9A|171482|family with sequence similarity 9, member A##BC112022|FAM9A|171482|family with sequence similarity 9, member A##AF494343|FAM9A|171482|family with sequence similarity 9, member A##NM_174951|FAM9A|171482|family with sequence similarity 9, member A##BC137426|KAL1|3730|Kallmann syndrome 1 sequence##BC137427|KAL1|3730|Kallmann syndrome 1 sequence##M97252|KAL1|3730|Kallmann syndrome 1 sequence##NM_000216|KAL1|3730|Kallmann syndrome 1 sequence##S60085|KAL1|3730|Kallmann syndrome 1 sequence##AK289409|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139466|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139467|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139468|TBL1X|6907|transducin (beta)-like 1X-linked##AK290962|TBL1X|6907|transducin (beta)-like 1X-linked##BC032708|TBL1X|6907|transducin (beta)-like 1X-linked##Y12781|TBL1X|6907|transducin (beta)-like 1X-linked##BC052304|TBL1X|6907|transducin (beta)-like 1X-linked##NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked##Z48804|GPR143|4935|G protein-coupled receptor 143##BC015657|GPR143|4935|G protein-coupled receptor 143##BC068977|GPR143|4935|G protein-coupled receptor 143##NM_000273|GPR143|4935|G protein-coupled receptor 143	0.955193	CTCF.p2:-11:0.955
chrY	1606420	1606529	reg1025808.p2	5.418	+	BC043610 GQ280263 NM_178129 AK126147	-436	-	AK301844 NM_001173473	-83823	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-84673	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	54055	+	NM_004043 U11090	57873	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	77529	+	BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr15	69518214	69518327	reg1026924.p1	5.417	+	TSC_hg19_v1_chr15_+_69452935 BC142975 AY635582 NM_015554 AK098595 BC033828 BC019011	-65372	+	NM_001184779 NM_024505 AF353088 AF353089 AK314689 AK074071	-211219	+	NM_001184780 NM_145658 AY358983 AF325189 AF325190 BC017998 AF275321 BC125097 BC125098 CU676134	-295355	+	TSC_hg19_v1_chr15_+_69591278 BC039234 NM_017705	73018	+	AK000197 AY424283 NM_001104554	88471	+	TSC_hg19_v1_chr15_+_69706649 NM_004856 NM_138555 BC051826 AK308322	188375	+	AY635582|GLCE|26035|glucuronic acid epimerase##NM_015554|GLCE|26035|glucuronic acid epimerase##NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_001184780|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_145658|SPESP1|246777|sperm equatorial segment protein 1##AY358983|SPESP1|246777|sperm equatorial segment protein 1##AF325189|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF325190|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC017998|SPESP1|246777|sperm equatorial segment protein 1##AF275321|SPESP1|246777|sperm equatorial segment protein 1##BC125097|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC125098|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC039234|PAQR5|54852|progestin and adipoQ receptor family member V##NM_017705|PAQR5|54852|progestin and adipoQ receptor family member V##AK000197|PAQR5|54852|progestin and adipoQ receptor family member V##AY424283|PAQR5|54852|progestin and adipoQ receptor family member V##NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V##NM_004856|KIF23|9493|kinesin family member 23##NM_138555|KIF23|9493|kinesin family member 23##BC051826|KIF23|9493|kinesin family member 23##AK308322|KIF23|9493|kinesin family member 23	0.015012	
chr1	80083589	80083681	reg1023533.p2	5.417	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-611208	-	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-968137	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	-997504	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	1688292	+	AF104266 AF104938 AF104939 NM_012302	2182446	+	AK097722 TSC_hg19_v1_chr1_-_84326308	4242633	-	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.141676	
chr4	70762379	70762491	reg1025265.p1	5.417	+	S77383 Y11195 AK310845 U08098 TSC_hg19_v1_chr4_-_70725864 BC027956 NM_005420	-36605	-	BC010895 NM_014465	-136006	-	AK314209 AK304249 NM_001252274 NM_001252275 NM_006798	-243470	-	NM_001025104 NM_001890 X78416 BC128227 BC128228 U23157	34373	+	X55739 BC069554 BC096194 BC096195 BC096196 BC096197 NM_001891 X17070	64283	-	NM_001009181 NM_003154 AK311812 AX772840 BC067219 M18078 M18371	99239	+	S77383|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##Y11195|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##AK310845|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##U08098|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##BC027956|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##NM_005420|SULT1E1|6783|sulfotransferase family 1E, estrogen-preferring, member 1##BC010895|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1##NM_014465|SULT1B1|27284|sulfotransferase family, cytosolic, 1B, member 1##AK314209|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##AK304249|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252274|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252275|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_006798|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001025104|CSN1S1|1446|casein alpha s1##NM_001890|CSN1S1|1446|casein alpha s1##X78416|CSN1S1|1446|casein alpha s1##BC128227|CSN1S1|1446|casein alpha s1##BC128228|CSN1S1|1446|casein alpha s1##U23157|CSN1S1|1446|casein alpha s1##X55739|CSN2|1447|casein beta##BC069554|CSN2|1447|casein beta##BC096194|CSN2|1447|casein beta##BC096195|CSN2|1447|casein beta##BC096196|CSN2|1447|casein beta##BC096197|CSN2|1447|casein beta##NM_001891|CSN2|1447|casein beta##X17070|CSN2|1447|casein beta##NM_001009181|STATH|6779|statherin##NM_003154|STATH|6779|statherin##AK311812|STATH|6779|statherin##BC067219|STATH|6779|statherin##M18078|STATH|6779|statherin##M18371|STATH|6779|statherin	0.181208	
chr5	126828564	126828745	reg1016647.p1	5.417	+	NM_032446 CR749437 AK307919 BC020198 AB058676 BC152478	-202120	+	AK126569 NM_001164478 NM_001164479	-419477	-	NM_178450	-462215	-	NM_130809 TSC_hg19_v1_chr5_+_126853331 AL831963 AL832056 AL832600 AJ427339 AJ441110 AJ496322 AJ515158 AJ515428 AJ515429 AK057437 BC017066	24697	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	30540	+	NM_001048252 AB219764	156069	+	NM_032446|MEGF10|84466|multiple EGF-like-domains 10##CR749437|MEGF10|84466|multiple EGF-like-domains 10##AK307919|MEGF10|84466|multiple EGF-like-domains 10##BC020198|MEGF10|84466|multiple EGF-like-domains 10##AB058676|MEGF10|84466|multiple EGF-like-domains 10##BC152478|MEGF10|84466|multiple EGF-like-domains 10##AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63##NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##NM_130809|PRRC1|133619|proline-rich coiled-coil 1##AL831963|PRRC1|133619|proline-rich coiled-coil 1##AL832056|PRRC1|133619|proline-rich coiled-coil 1##AL832600|PRRC1|133619|proline-rich coiled-coil 1##AJ427339|PRRC1|133619|proline-rich coiled-coil 1##AJ441110|PRRC1|133619|proline-rich coiled-coil 1##AJ496322|PRRC1|133619|proline-rich coiled-coil 1##AJ515158|PRRC1|133619|proline-rich coiled-coil 1##AJ515428|PRRC1|133619|proline-rich coiled-coil 1##AJ515429|PRRC1|133619|proline-rich coiled-coil 1##AK057437|PRRC1|133619|proline-rich coiled-coil 1##BC017066|PRRC1|133619|proline-rich coiled-coil 1##AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1##NM_001048252|CTXN3|613212|cortexin 3##AB219764|CTXN3|613212|cortexin 3	0.220846	CTCF.p2:-37:0.221
chr9	21396034	21396215	reg1006684.p1	5.417	+	AY255838 V00548 AB590747 CR541921 JN848522 BC074936 BC074937 BC104163 BC104164 M54886 V00544 V00549 NM_000605	-10798	-	AB464595 CU686802 HQ258738 JN848523 BC093988 BC112002 BC069427 NM_006900	-28085	-	AB590746 BC069471 BC096697 BC096710 BC096730 BC098357 NM_021002	-45239	-	K01900 NM_002170 BC104828 BC104830 V00545 V00550	13016	+	NM_024013 V00538 V00537 BC112300 BC112302 BC074928 BC074929 AB464595 CU686802 HQ258738 JN848523	44355	+	AY358570 NM_176891	86187	-	AY255838|IFNA2|3440|interferon, alpha 2##V00548|IFNA2|3440|interferon, alpha 2##CR541921|IFNA2|3440|interferon, alpha 2##BC074936|IFNA2|3440|interferon, alpha 2##BC074937|IFNA2|3440|interferon, alpha 2##BC104163|IFNA2|3440|interferon, alpha 2##BC104164|IFNA2|3440|interferon, alpha 2##M54886|IFNA2|3440|interferon, alpha 2##V00544|IFNA2|3440|interferon, alpha 2##V00549|IFNA2|3440|interferon, alpha 2##NM_000605|IFNA2|3440|interferon, alpha 2##HQ258738|IFNA1|3439|interferon, alpha 1##BC093988|IFNA13|3447|interferon, alpha 13##BC112002|IFNA1|3439|interferon, alpha 1##BC069427|IFNA13|3447|interferon, alpha 13##NM_006900|IFNA13|3447|interferon, alpha 13##BC069471|IFNA6|3443|interferon, alpha 6##BC096697|IFNA6|3443|interferon, alpha 6##BC096710|IFNA6|3443|interferon, alpha 6##BC096730|IFNA6|3443|interferon, alpha 6##BC098357|IFNA6|3443|interferon, alpha 6##NM_021002|IFNA6|3443|interferon, alpha 6##K01900|IFNA8|3445|interferon, alpha 8##NM_002170|IFNA8|3445|interferon, alpha 8##BC104828|IFNA8|3445|interferon, alpha 8##BC104830|IFNA8|3445|interferon, alpha 8##V00545|IFNA8|3445|interferon, alpha 8##V00550|IFNA8|3445|interferon, alpha 8##NM_024013|IFNA1|3439|interferon, alpha 1##V00538|IFNA1|3439|interferon, alpha 1##V00537|IFNA1|3439|interferon, alpha 1##BC112300|IFNA1|3439|interferon, alpha 1##BC112302|IFNA1|3439|interferon, alpha 1##BC074928|IFNA1|3439|interferon, alpha 1##BC074929|IFNA1|3439|interferon, alpha 1##HQ258738|IFNA1|3439|interferon, alpha 1##AY358570|IFNE|338376|interferon, epsilon##NM_176891|IFNE|338376|interferon, epsilon	0.0	
chr13	111227877	111228021	reg1024976.p1	5.416	+	AJ272065 CU693106 DQ892145 DQ895340 TSC_hg19_v1_chr13_-_111214042 AK000436 AK000446 NM_017817 BC026025	-13977	-	X05610 TSC_hg19_v1_chr13_+_111154089	-73898	+	TSC_hg19_v1_chr13_+_111138079 M24766	-89861	+	TSC_hg19_v1_chr13_+_111267870 NM_001242882 NM_001242883	39881	+	TSC_hg19_v1_chr13_+_111267898 AK093771 AK298917 AX748297 AK302117 AK057767 AK296758 NM_001242881 NM_018210 AK296227 AK024260 BC041028 AK001631 AK225129	40093	+	TSC_hg19_v1_chr13_-_111268694 AK095260	40749	-	AJ272065|RAB20|55647|RAB20, member RAS oncogene family##DQ892145|RAB20|55647|RAB20, member RAS oncogene family##DQ895340|RAB20|55647|RAB20, member RAS oncogene family##AK000436|RAB20|55647|RAB20, member RAS oncogene family##AK000446|RAB20|55647|RAB20, member RAS oncogene family##NM_017817|RAB20|55647|RAB20, member RAS oncogene family##BC026025|RAB20|55647|RAB20, member RAS oncogene family##X05610|COL4A2|1284|collagen, type IV, alpha 2##M24766|COL4A2|1284|collagen, type IV, alpha 2##NM_001242882|CARKD|55739|carbohydrate kinase domain containing##NM_001242883|CARKD|55739|carbohydrate kinase domain containing##AK093771|CARKD|55739|carbohydrate kinase domain containing##AK298917|CARKD|55739|carbohydrate kinase domain containing##AK302117|CARKD|55739|carbohydrate kinase domain containing##AK057767|CARKD|55739|carbohydrate kinase domain containing##AK296758|CARKD|55739|carbohydrate kinase domain containing##NM_001242881|CARKD|55739|carbohydrate kinase domain containing##NM_018210|CARKD|55739|carbohydrate kinase domain containing##AK296227|CARKD|55739|carbohydrate kinase domain containing##AK024260|CARKD|55739|carbohydrate kinase domain containing##BC041028|CARKD|55739|carbohydrate kinase domain containing##AK001631|CARKD|55739|carbohydrate kinase domain containing##AK225129|CARKD|55739|carbohydrate kinase domain containing	0.680476	CTCF.p2:66:0.680
chr22	25963339	25963490	reg1026467.p2	5.416	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-2468	+	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	-2615	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	-119338	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	174706	+	TSC_hg19_v1_chr22_+_26138168 AY077700	174770	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	602023	+	BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##AY077700|MYO18B|84700|myosin XVIIIB##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.685261	CTCF.p2:-31:0.685
chr5	38832075	38832154	reg1023329.p1	5.416	+	AK308158 AK309882 NM_002310	-236608	-	TSC_hg19_v1_chr5_-_38556749 AK290059 NM_001127671	-275386	-	NM_182801 BC033177 AK092994 AX747843 BC033188	-386490	+	NM_001168355 TSC_hg19_v1_chr5_+_38845959	13845	+	TSC_hg19_v1_chr5_+_38846113 NM_003999 BC010943 U60805 AK304016 BC063468	13960	+	TSC_hg19_v1_chr5_+_38846260 BC125209 BC125210	14181	+	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha##AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha##AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_182801|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033177|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK092994|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033188|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_001168355|OSMR|9180|oncostatin M receptor##NM_003999|OSMR|9180|oncostatin M receptor##BC010943|OSMR|9180|oncostatin M receptor##U60805|OSMR|9180|oncostatin M receptor##AK304016|OSMR|9180|oncostatin M receptor##BC063468|OSMR|9180|oncostatin M receptor##BC125209|OSMR|9180|oncostatin M receptor##BC125210|OSMR|9180|oncostatin M receptor	0.98225	CTCF.p2:16:0.982
chrX	152084279	152084427	reg1021729.p1	5.416	+	AK296967 NM_001178106 NM_001178107 NM_001178108 NM_001178109 NM_001178110 NM_007150 AY997296 DQ508022 DQ508023 DQ508024 DQ508025 DQ508026	-1344	+	TSC_hg19_v1_chrX_+_151999606 AK026549	-84741	+	TSC_hg19_v1_chrX_+_151999576 BC000245	-84776	+	AK301530 NM_001178113	2055	+	NM_001178115 AK095258	25876	+	BC101111 BC101112 BC101113 BC101114 AK295446 AK316104 AB067521 AY121806 NM_001103150 NM_001103151 NM_052926	76329	-	AK296967|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178106|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178107|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178108|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178109|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178110|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_007150|ZNF185|7739|zinc finger protein 185 (LIM domain)##AY997296|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508022|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508023|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508024|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508025|ZNF185|7739|zinc finger protein 185 (LIM domain)##DQ508026|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK026549|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##BC000245|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##AK301530|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178113|ZNF185|7739|zinc finger protein 185 (LIM domain)##NM_001178115|ZNF185|7739|zinc finger protein 185 (LIM domain)##AK095258|ZNF185|7739|zinc finger protein 185 (LIM domain)##BC101111|PNMA5|114824|paraneoplastic antigen like 5##BC101112|PNMA5|114824|paraneoplastic antigen like 5##BC101113|PNMA5|114824|paraneoplastic antigen like 5##AK295446|PNMA5|114824|paraneoplastic antigen like 5##AK316104|PNMA5|114824|paraneoplastic antigen like 5##AB067521|PNMA5|114824|paraneoplastic antigen like 5##AY121806|PNMA5|114824|paraneoplastic antigen like 5##NM_001103150|PNMA5|114824|paraneoplastic antigen like 5##NM_001103151|PNMA5|114824|paraneoplastic antigen like 5##NM_052926|PNMA5|114824|paraneoplastic antigen like 5	0.423305	CTCF.p2:-3:0.359
chrX	77811252	77811402	reg1004884.p2	5.416	+	BC035750 DQ131801 DQ131800 AK023929 DQ131802 NM_006639 AK313643 DQ131799	-228244	-	AB529179 DQ891928 DQ895115 BC071649 TSC_hg19_v1_chrX_-_77395133 AF220509 BC009566 AK312579 BC010350 BC146952 BC146960 NM_015975	-416184	-	AB062432 TSC_hg19_v1_chrX_+_77359778 BC104837 BC113568 BC023234 AY423725 AB385546 CR456716 HQ258236	-451525	+	AK096184 NM_152694	103497	-	NM_005296 AK314134	191881	+	NM_014499 NM_198333 AK313218 AK292138 BC051875	389545	+	BC035750|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131801|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131800|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK023929|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131802|CYSLTR1|10800|cysteinyl leukotriene receptor 1##NM_006639|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK313643|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131799|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ891928|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##DQ895115|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC071649|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AF220509|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC009566|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AK312579|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC010350|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146952|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146960|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##NM_015975|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AB062432|PGK1|5230|phosphoglycerate kinase 1##BC104837|PGK1|5230|phosphoglycerate kinase 1##BC113568|PGK1|5230|phosphoglycerate kinase 1##BC023234|PGK1|5230|phosphoglycerate kinase 1##AY423725|PGK1|5230|phosphoglycerate kinase 1##CR456716|PGK1|5230|phosphoglycerate kinase 1##HQ258236|PGK1|5230|phosphoglycerate kinase 1##AK096184|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_152694|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	0.0	
chr11	43846878	43847058	reg1028080.p2	5.415	+	NM_016142 TSC_hg19_v1_chr11_+_43702287 AK027882 AK075011 AK292625 AK075216 AK074952 AF078850 BC012043 AK222881 AK301663 BC012536 EU176708	-144710	+	TSC_hg19_v1_chr11_+_43665785 AK095484	-181184	+	TSC_hg19_v1_chr11_+_43380492 AK001752 BC017238 BC033000	-466476	+	TSC_hg19_v1_chr11_+_43902380 NM_139178 AK315266 AB042029 BC067257	55425	+	TSC_hg19_v1_chr11_+_43964186 NM_001145033 BC052560	117041	+	AB231734 NM_001031854 BC144554	222579	+	NM_016142|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK027882|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075011|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK292625|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075216|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK074952|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AF078850|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012043|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK222881|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK301663|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012536|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##EU176708|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK001752|TTC17|55761|tetratricopeptide repeat domain 17##BC017238|TTC17|55761|tetratricopeptide repeat domain 17##BC033000|TTC17|55761|tetratricopeptide repeat domain 17##NM_139178|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AK315266|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AB042029|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##BC067257|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##NM_001145033|C11orf96|387763|chromosome 11 open reading frame 96##BC052560|C11orf96|387763|chromosome 11 open reading frame 96##AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	0.957699	CTCF.p2:9:0.958
chr5	34245264	34245389	reg1028481.p1	5.415	+	EU399231 EU399232 BC112925 AF329837 BC120990 AF326976 AY358388 AK075533 BX640995 AK315921 AK295968 NM_030945 NM_181435	-202024	-	TSC_hg19_v1_chr5_-_34008240 AK225749	-237082	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	-237163	-	TSC_hg19_v1_chr5_+_34656432 NM_001145522 NM_015577	411087	+	TSC_hg19_v1_chr5_+_34656506 BC052988 AF155135 AK314379	411186	+	AB037755 NM_001145520 TSC_hg19_v1_chr5_+_34656599	411271	+	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK225749|AMACR|23600|alpha-methylacyl-CoA racemase##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001145522|RAI14|26064|retinoic acid induced 14##NM_015577|RAI14|26064|retinoic acid induced 14##BC052988|RAI14|26064|retinoic acid induced 14##AF155135|RAI14|26064|retinoic acid induced 14##AK314379|RAI14|26064|retinoic acid induced 14##AB037755|RAI14|26064|retinoic acid induced 14##NM_001145520|RAI14|26064|retinoic acid induced 14	0.98704	CTCF.p2:-3:0.987
chr6_ssto_hap7	325917	325992	reg1021859.p1	5.415	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999391	CTCF.p2:1:0.999
chrX	9965843	9965971	reg1024936.p2	5.415	+	NM_001195081	-30510	+	BC140866 TSC_hg19_v1_chrX_+_9754543	-211364	+	TSC_hg19_v1_chrX_+_9754468 NM_001649 X83543	-211427	+	BC098455 NM_015691	17886	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	159147	+	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	569652	-	NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##BC140866|SHROOM2|357|shroom family member 2##NM_001649|SHROOM2|357|shroom family member 2##X83543|SHROOM2|357|shroom family member 2##BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)	0.0	
chr1	117172738	117172871	reg1024258.p1	5.414	+	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	-59127	-	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	-59189	-	TSC_hg19_v1_chr1_-_116961216 AK309389	-211566	-	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	37579	-	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	124303	+	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	279838	+	AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK309389|ATP1A1OS|84852|ATP1A1 opposite strand##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3##AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator	0.999549	CTCF.p2:14:1.000
chr11	82952521	82952637	reg1026686.p1	5.414	+	BX648690 NM_182603 DQ508815 AK095193 BC171752	-47091	+	TSC_hg19_v1_chr11_+_82904780 DQ508934 BC045621 AK310765 EF041819	-47745	+	AK311356 TSC_hg19_v1_chr11_-_82904700	-47877	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	44454	-	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	44826	-	AK299778 CR933674 NM_001142702	440872	-	BX648690|ANKRD42|338699|ankyrin repeat domain 42##NM_182603|ANKRD42|338699|ankyrin repeat domain 42##DQ508815|ANKRD42|338699|ankyrin repeat domain 42##AK095193|ANKRD42|338699|ankyrin repeat domain 42##BC171752|ANKRD42|338699|ankyrin repeat domain 42##DQ508934|ANKRD42|338699|ankyrin repeat domain 42##BC045621|ANKRD42|338699|ankyrin repeat domain 42##AK310765|ANKRD42|338699|ankyrin repeat domain 42##EF041819|ANKRD42|338699|ankyrin repeat domain 42##AK311356|DKFZp547G183|55525|uncharacterized LOC55525##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)	0.926905	CTCF.p2:-2:0.927
chr12	93561678	93561855	reg1027077.p1	5.414	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-238668	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-238723	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	-238828	-	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	210126	+	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	273920	-	TSC_hg19_v1_chr12_-_93835718 D83004	273952	-	NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.0	
chr16	74309080	74309190	reg1024327.p1	5.414	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-1216549	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-1226914	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-1317430	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	21558	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	21636	+	TSC_hg19_v1_chr16_-_74401811 AK124154	92677	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.827011	CTCF.p2:5:0.827
chr2	23627369	23627490	reg1023455.p1	5.414	+	NM_052920	-19132	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2360500	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-2360530	-	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	522517	-	TSC_hg19_v1_chr2_+_24150144 BC037901	522728	+	TSC_hg19_v1_chr2_+_24163332 BC092484 AL832079 NM_181713 BC111997 BC093681 BC143298	535942	+	NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A##BC092484|UBXN2A|165324|UBX domain protein 2A##AL832079|UBXN2A|165324|UBX domain protein 2A##NM_181713|UBXN2A|165324|UBX domain protein 2A##BC111997|UBXN2A|165324|UBX domain protein 2A##BC093681|UBXN2A|165324|UBX domain protein 2A##BC143298|UBXN2A|165324|UBX domain protein 2A	0.604451	CTCF.p2:9:0.604
chr8	10081895	10081961	reg1043705.p2	5.414	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	-128865	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	-170049	+	TSC_hg19_v1_chr8_+_9911765 AY958429	-170159	+	BC033497 NM_001197020 NM_198464 AY358867	301139	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	430712	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	448231	+	AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AY958429|MSRA|4482|methionine sulfoxide reductase A##BC033497|PRSS55|203074|protease, serine, 55##NM_001197020|PRSS55|203074|protease, serine, 55##NM_198464|PRSS55|203074|protease, serine, 55##AY358867|PRSS55|203074|protease, serine, 55##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74	0.0	
chr1	167098206	167098329	reg1026229.p1	5.413	+	NM_001080426	-34181	+	CU687006 BC074830 BC074876 TSC_hg19_v1_chr1_-_167059615 BC107164 BC107165 AK312833 BC069705 BC069723 BC069745 BC069761 BC069789 NM_005814 U79725	-38572	-	TSC_hg19_v1_chr1_+_166958503 AK302253 AK131066 DQ076156 GU383113 AK027810 NM_032858 BC028595 AB590622 CU688524	-139725	+	TSC_hg19_v1_chr1_+_167190127 NM_001198786 NM_002697 AK302525 AK303201 AK308004 AK091438 S66901 BC052274 X13403	91790	+	NM_001198783 TSC_hg19_v1_chr1_+_167298306	200031	+	TSC_hg19_v1_chr1_+_167298389 AY113189 BC001664 BC003571	200172	+	NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)##BC074830|GPA33|10223|glycoprotein A33 (transmembrane)##BC074876|GPA33|10223|glycoprotein A33 (transmembrane)##BC107164|GPA33|10223|glycoprotein A33 (transmembrane)##BC107165|GPA33|10223|glycoprotein A33 (transmembrane)##AK312833|GPA33|10223|glycoprotein A33 (transmembrane)##BC069705|GPA33|10223|glycoprotein A33 (transmembrane)##BC069723|GPA33|10223|glycoprotein A33 (transmembrane)##BC069745|GPA33|10223|glycoprotein A33 (transmembrane)##BC069761|GPA33|10223|glycoprotein A33 (transmembrane)##BC069789|GPA33|10223|glycoprotein A33 (transmembrane)##NM_005814|GPA33|10223|glycoprotein A33 (transmembrane)##U79725|GPA33|10223|glycoprotein A33 (transmembrane)##AK302253|MAEL|84944|maelstrom homolog (Drosophila)##AK131066|MAEL|84944|maelstrom homolog (Drosophila)##DQ076156|MAEL|84944|maelstrom homolog (Drosophila)##GU383113|MAEL|84944|maelstrom homolog (Drosophila)##AK027810|MAEL|84944|maelstrom homolog (Drosophila)##NM_032858|MAEL|84944|maelstrom homolog (Drosophila)##BC028595|MAEL|84944|maelstrom homolog (Drosophila)##NM_001198786|POU2F1|5451|POU class 2 homeobox 1##NM_002697|POU2F1|5451|POU class 2 homeobox 1##AK302525|POU2F1|5451|POU class 2 homeobox 1##AK303201|POU2F1|5451|POU class 2 homeobox 1##AK308004|POU2F1|5451|POU class 2 homeobox 1##AK091438|POU2F1|5451|POU class 2 homeobox 1##BC052274|POU2F1|5451|POU class 2 homeobox 1##X13403|POU2F1|5451|POU class 2 homeobox 1##NM_001198783|POU2F1|5451|POU class 2 homeobox 1##AY113189|POU2F1|5451|POU class 2 homeobox 1##BC001664|POU2F1|5451|POU class 2 homeobox 1##BC003571|POU2F1|5451|POU class 2 homeobox 1	0.506194	CTCF.p2:24:0.506
chr12	50339436	50339565	reg1026234.p2	5.413	+	CU674012 AB463040 TSC_hg19_v1_chr12_-_50297671 AB023167 BC000051 AK290031 AF190461 NM_012306	-41833	-	CU690986 BC053560 BC040957 AK292194 NM_181708	-102611	-	TSC_hg19_v1_chr12_-_50222197 NM_001037806	-117301	-	AK225940 NM_000486 BC042496 S73196 S73197 CR542024	5068	+	NM_001651	15778	+	NM_001652 U48408	27119	+	AB023167|FAIM2|23017|Fas apoptotic inhibitory molecule 2##BC000051|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AK290031|FAIM2|23017|Fas apoptotic inhibitory molecule 2##AF190461|FAIM2|23017|Fas apoptotic inhibitory molecule 2##NM_012306|FAIM2|23017|Fas apoptotic inhibitory molecule 2##BC053560|BCDIN3D|144233|BCDIN3 domain containing##BC040957|BCDIN3D|144233|BCDIN3 domain containing##AK292194|BCDIN3D|144233|BCDIN3 domain containing##NM_181708|BCDIN3D|144233|BCDIN3 domain containing##NM_001037806|NCKAP5L|57701|NCK-associated protein 5-like##AK225940|AQP2|359|aquaporin 2 (collecting duct)##NM_000486|AQP2|359|aquaporin 2 (collecting duct)##BC042496|AQP2|359|aquaporin 2 (collecting duct)##S73196|AQP2|359|aquaporin 2 (collecting duct)##S73197|AQP2|359|aquaporin 2 (collecting duct)##CR542024|AQP2|359|aquaporin 2 (collecting duct)##NM_001651|AQP5|362|aquaporin 5##NM_001652|AQP6|363|aquaporin 6, kidney specific##U48408|AQP6|363|aquaporin 6, kidney specific	0.920253	CTCF.p2:14:0.920
chr18	77748206	77748346	reg1021662.p2	5.413	+	TSC_hg19_v1_chr18_+_77724644 NM_001136180 BC040056 BC017654 BC157848	-23653	+	AK301881 NM_001146343 NM_001146345 NM_025078 TSC_hg19_v1_chr18_-_77711653	-36624	-	TSC_hg19_v1_chr18_-_77711643 BC030140	-36650	-	AF146373 AB528659 AK309098 TSC_hg19_v1_chr18_-_77748548 AF023611 AF023612 BC001046 BC019272 NM_006701 AK314901	194	-	AK308703 TSC_hg19_v1_chr18_-_77793959	45660	-	AK307212 NM_001171967 NM_024805 AK024825 TSC_hg19_v1_chr18_+_77794477 AK311463 AK311239 AF261073 AF439745 BC057772 BC014195 CU680826	46190	+	NM_001136180|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC040056|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC017654|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC157848|HSBP1L1|440498|heat shock factor binding protein 1-like 1##AK301881|PQLC1|80148|PQ loop repeat containing 1##NM_001146343|PQLC1|80148|PQ loop repeat containing 1##NM_001146345|PQLC1|80148|PQ loop repeat containing 1##NM_025078|PQLC1|80148|PQ loop repeat containing 1##BC030140|PQLC1|80148|PQ loop repeat containing 1##AF146373|TXNL4A|10907|thioredoxin-like 4A##AK309098|TXNL4A|10907|thioredoxin-like 4A##AF023611|TXNL4A|10907|thioredoxin-like 4A##AF023612|TXNL4A|10907|thioredoxin-like 4A##BC001046|TXNL4A|10907|thioredoxin-like 4A##BC019272|TXNL4A|10907|thioredoxin-like 4A##NM_006701|TXNL4A|10907|thioredoxin-like 4A##AK314901|TXNL4A|10907|thioredoxin-like 4A##AK307212|RBFA|79863|ribosome binding factor A (putative)##NM_001171967|RBFA|79863|ribosome binding factor A (putative)##NM_024805|RBFA|79863|ribosome binding factor A (putative)##AK024825|RBFA|79863|ribosome binding factor A (putative)##AK311463|RBFA|79863|ribosome binding factor A (putative)##AK311239|RBFA|79863|ribosome binding factor A (putative)##AF261073|RBFA|79863|ribosome binding factor A (putative)##AF439745|RBFA|79863|ribosome binding factor A (putative)##BC057772|RBFA|79863|ribosome binding factor A (putative)##BC014195|RBFA|79863|ribosome binding factor A (putative)	0.0	
chr19	15979983	15980113	reg1026778.p1	5.413	+	HQ258605 BC130360 BC132969 NM_013940	-61157	-	BC136869 AB529278 NM_001004466	-75239	+	AB529277 BC106707 BC113844 NM_013938	-127847	+	BC067437 BC067438 BC067439 BC067440 D26480 AK313705 U02388 AK300961 TSC_hg19_v1_chr19_-_16008885 AK290790 AK296200 NM_001082	28829	-	TSC_hg19_v1_chr19_-_16045678 BC016853 NM_001128932 NM_021187	65625	-	NM_001004465	79769	+	HQ258605|OR10H1|26539|olfactory receptor, family 10, subfamily H, member 1##BC130360|OR10H1|26539|olfactory receptor, family 10, subfamily H, member 1##BC132969|OR10H1|26539|olfactory receptor, family 10, subfamily H, member 1##NM_013940|OR10H1|26539|olfactory receptor, family 10, subfamily H, member 1##BC136869|OR10H5|284433|olfactory receptor, family 10, subfamily H, member 5##NM_001004466|OR10H5|284433|olfactory receptor, family 10, subfamily H, member 5##BC106707|OR10H3|26532|olfactory receptor, family 10, subfamily H, member 3##BC113844|OR10H3|26532|olfactory receptor, family 10, subfamily H, member 3##NM_013938|OR10H3|26532|olfactory receptor, family 10, subfamily H, member 3##BC067437|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##BC067438|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##BC067439|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##BC067440|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##D26480|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##AK313705|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##U02388|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##AK300961|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##AK290790|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##AK296200|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##NM_001082|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##BC016853|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_001128932|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_021187|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_001004465|OR10H4|126541|olfactory receptor, family 10, subfamily H, member 4	0.066537	
chr3	76157235	76157332	reg1025555.p1	5.413	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-322581	-	NM_001128223	-323029	-	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	-435797	+	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	931997	+	TSC_hg19_v1_chr3_-_78666943 AK025535	2509702	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	2911304	-	AK123776|ZNF717|100131827|zinc finger protein 717##NM_001128223|ZNF717|100131827|zinc finger protein 717##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)	0.98211	CTCF.p2:19:0.982
chr5	165057381	165057508	reg1026161.p1	5.413	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-2124801	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-2127156	+	NM_001142556 NM_001142557 NM_012484 NM_012485 BC057235 AK313603 BC030505 TSC_hg19_v1_chr5_+_162887665 AK302975 BC006984 AK303616 BC070281 BC017793 U29343 AF032862 BC108904 BC108905 BC107869 AK290577	-2169849	+	HE578282 HE578283 NM_001122679	1654398	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	2661377	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	2856030	+	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001142556|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001142557|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012484|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012485|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC057235|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK313603|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC030505|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK302975|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK303616|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC070281|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC017793|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##U29343|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AF032862|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108904|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108905|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC107869|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK290577|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.991999	CTCF.p2:-23:0.992
chr6	21935934	21936062	reg1025473.p2	5.413	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	-269339	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	-341626	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1401275	+	BC015850 NM_000948	361731	-	X54394 X54393 GQ305133 M58594 NM_001163558	367049	-	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	633727	+	AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1	0.996771	CTCF.p2:-4:0.997
chr11	43730436	43730572	reg1027613.p1	5.412	+	NM_016142 TSC_hg19_v1_chr11_+_43702287 AK027882 AK075011 AK292625 AK075216 AK074952 AF078850 BC012043 AK222881 AK301663 BC012536 EU176708	-28246	+	TSC_hg19_v1_chr11_+_43665785 AK095484	-64720	+	TSC_hg19_v1_chr11_+_43380492 AK001752 BC017238 BC033000	-350012	+	TSC_hg19_v1_chr11_+_43902380 NM_139178 AK315266 AB042029 BC067257	171889	+	TSC_hg19_v1_chr11_+_43964186 NM_001145033 BC052560	233505	+	AB231734 NM_001031854 BC144554	339043	+	NM_016142|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK027882|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075011|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK292625|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075216|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK074952|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AF078850|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012043|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK222881|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK301663|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012536|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##EU176708|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK001752|TTC17|55761|tetratricopeptide repeat domain 17##BC017238|TTC17|55761|tetratricopeptide repeat domain 17##BC033000|TTC17|55761|tetratricopeptide repeat domain 17##NM_139178|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AK315266|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AB042029|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##BC067257|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##NM_001145033|C11orf96|387763|chromosome 11 open reading frame 96##BC052560|C11orf96|387763|chromosome 11 open reading frame 96##AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like	0.861525	CTCF.p2:26:0.862
chr1	29063155	29063318	reg1027189.p2	5.412	+	BC001473 AK315195 AK315436 AF173868 AF203694 AK023126 TSC_hg19_v1_chr1_+_28995361	-67908	+	TSC_hg19_v1_chr1_+_28995244 NM_006582 NM_024482 AK000892	-68007	+	BC011986 TSC_hg19_v1_chr1_-_28969617 U57693 X84002 AK310097 NM_001135218 NM_005644	-93656	-	NM_001173128 NM_016258 BC002559 AK292581 TSC_hg19_v1_chr1_+_29063435	47	+	TSC_hg19_v1_chr1_+_29063503 AK303833 NM_001172828 AF432214 AF155095 AF192968 DQ892157 DQ895352 CU678040 AB451335 AB451484	301	+	NM_000911 U07882	75417	+	BC001473|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK315195|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK315436|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AF173868|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AF203694|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK023126|GMEB1|10691|glucocorticoid modulatory element binding protein 1##NM_006582|GMEB1|10691|glucocorticoid modulatory element binding protein 1##NM_024482|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK000892|GMEB1|10691|glucocorticoid modulatory element binding protein 1##BC011986|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##U57693|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##X84002|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##AK310097|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##NM_001135218|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##NM_005644|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##NM_001173128|YTHDF2|51441|YTH domain family, member 2##NM_016258|YTHDF2|51441|YTH domain family, member 2##BC002559|YTHDF2|51441|YTH domain family, member 2##AK292581|YTHDF2|51441|YTH domain family, member 2##AK303833|YTHDF2|51441|YTH domain family, member 2##NM_001172828|YTHDF2|51441|YTH domain family, member 2##AF432214|YTHDF2|51441|YTH domain family, member 2##AF155095|YTHDF2|51441|YTH domain family, member 2##AF192968|YTHDF2|51441|YTH domain family, member 2##DQ892157|YTHDF2|51441|YTH domain family, member 2##DQ895352|YTHDF2|51441|YTH domain family, member 2##AB451335|YTHDF2|51441|YTH domain family, member 2##AB451484|YTHDF2|51441|YTH domain family, member 2##NM_000911|OPRD1|4985|opioid receptor, delta 1##U07882|OPRD1|4985|opioid receptor, delta 1	0.800221	CTCF.p2:23:0.800
chr5	137071813	137071929	reg1026221.p2	5.412	+	AK098190 BC034035 NM_017415 TSC_hg19_v1_chr5_-_137071807	-110	-	AF208068 AK314707 TSC_hg19_v1_chr5_-_137071541 AB032955	-366	-	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	-236891	-	TSC_hg19_v1_chr5_-_137088952 BC012490	17085	-	L10372 TSC_hg19_v1_chr5_-_137089473	17584	-	AB528924 CR456986 BC007271 BC009284 TSC_hg19_v1_chr5_-_137089840	17932	-	BC034035|KLHL3|26249|kelch-like 3 (Drosophila)##NM_017415|KLHL3|26249|kelch-like 3 (Drosophila)##AF208068|KLHL3|26249|kelch-like 3 (Drosophila)##AK314707|KLHL3|26249|kelch-like 3 (Drosophila)##AB032955|KLHL3|26249|kelch-like 3 (Drosophila)##AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC012490|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##L10372|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##CR456986|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC007271|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC009284|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	0.0	
chr16	86794879	86794960	reg1025479.p2	5.411	+	BC100027 NM_005250	-182805	+	BC113437 BC113439 NM_005251	-194063	+	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	-206147	-	TSC_hg19_v1_chr16_-_87350760 AB528835 AM392822 AM393070	555881	-	TSC_hg19_v1_chr16_-_87350999 BC015536 AK026130 NM_001195124 NM_001195125	556067	-	TSC_hg19_v1_chr16_-_87417364 AY736035 AF428140 BC012748 BC002985 NM_024735	622443	-	BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AM392822|C16orf95|100506581|chromosome 16 open reading frame 95##AM393070|C16orf95|100506581|chromosome 16 open reading frame 95##BC015536|C16orf95|100506581|chromosome 16 open reading frame 95##AK026130|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195124|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195125|C16orf95|100506581|chromosome 16 open reading frame 95##AY736035|FBXO31|79791|F-box protein 31##AF428140|FBXO31|79791|F-box protein 31##BC012748|FBXO31|79791|F-box protein 31##BC002985|FBXO31|79791|F-box protein 31##NM_024735|FBXO31|79791|F-box protein 31	0.0	
chr17	4690708	4690791	reg1023472.p1	5.411	+	BC104194 AY359099 BC104195 AF521892 BC038467 NM_001144939 NM_001144940 NM_001144941 NM_182566	-1131	-	TSC_hg19_v1_chr17_+_4675180 AX772822 BC069519 NM_003963 AF027204 BC093688 BC117163 CU686880 CR456925 CR541798	-15553	+	AK302181 NM_001136046 AK310469 AL136893 NM_032265	-47422	+	TSC_hg19_v1_chr17_+_4692258 BC029290 NM_001014985	1522	+	TSC_hg19_v1_chr17_-_4693697 BC127703 BC150535 AK057919	2944	-	NM_002798 TSC_hg19_v1_chr17_+_4699458	8708	+	BC104194|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##AY359099|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##BC104195|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##AF521892|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##BC038467|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##NM_001144939|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##NM_001144940|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##NM_001144941|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##NM_182566|VMO1|284013|vitelline membrane outer layer 1 homolog (chicken)##BC069519|TM4SF5|9032|transmembrane 4 L six family member 5##NM_003963|TM4SF5|9032|transmembrane 4 L six family member 5##AF027204|TM4SF5|9032|transmembrane 4 L six family member 5##BC093688|TM4SF5|9032|transmembrane 4 L six family member 5##BC117163|TM4SF5|9032|transmembrane 4 L six family member 5##CR456925|TM4SF5|9032|transmembrane 4 L six family member 5##CR541798|TM4SF5|9032|transmembrane 4 L six family member 5##AK302181|ZMYND15|84225|zinc finger, MYND-type containing 15##NM_001136046|ZMYND15|84225|zinc finger, MYND-type containing 15##AK310469|ZMYND15|84225|zinc finger, MYND-type containing 15##AL136893|ZMYND15|84225|zinc finger, MYND-type containing 15##NM_032265|ZMYND15|84225|zinc finger, MYND-type containing 15##BC029290|GLTPD2|388323|glycolipid transfer protein domain containing 2##NM_001014985|GLTPD2|388323|glycolipid transfer protein domain containing 2##AK057919|LOC284014|284014|uncharacterized LOC284014##NM_002798|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6	0.085551	
chr19	36551480	36551607	reg1027171.p1	5.411	+	TSC_hg19_v1_chr19_+_36545864 BC151839 BX647726	-5677	+	TSC_hg19_v1_chr19_+_36545814 BC058939	-5721	+	TSC_hg19_v1_chr19_+_36545770 AK090617 AX746536 NM_001083961 NM_173636	-5772	+	NM_001281	54344	+	TSC_hg19_v1_chr19_-_36605794 DQ893214 DQ896543 AB464045 BC017860 AK312206 BC017112 NM_006233 BC067794	54442	-	TSC_hg19_v1_chr19_+_36606369 D49738 BC052812 AF013488 BC005969 BT007424 DQ892900 DQ896150	54856	+	BC151839|WDR62|284403|WD repeat domain 62##BX647726|WDR62|284403|WD repeat domain 62##BC058939|WDR62|284403|WD repeat domain 62##AK090617|WDR62|284403|WD repeat domain 62##NM_001083961|WDR62|284403|WD repeat domain 62##NM_173636|WDR62|284403|WD repeat domain 62##NM_001281|TBCB|1155|tubulin folding cofactor B##DQ893214|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##DQ896543|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##BC017860|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##AK312206|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##BC017112|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##NM_006233|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##BC067794|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##D49738|TBCB|1155|tubulin folding cofactor B##BC052812|TBCB|1155|tubulin folding cofactor B##AF013488|TBCB|1155|tubulin folding cofactor B##BC005969|TBCB|1155|tubulin folding cofactor B##BT007424|TBCB|1155|tubulin folding cofactor B##DQ892900|TBCB|1155|tubulin folding cofactor B##DQ896150|TBCB|1155|tubulin folding cofactor B	0.968048	CTCF.p2:-3:0.968
chr19	42101760	42101900	reg1028048.p1	5.411	+	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	-19253	+	NM_001130514	-152768	+	TSC_hg19_v1_chr19_-_41945831 AK298197 NM_001167869 NM_001167870 NM_001167871 NM_018035	-155997	-	D90276 AK298701 NM_001817	31604	-	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	90322	-	TSC_hg19_v1_chr19_+_42212531 NM_004363	110698	+	BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##AK298197|ATP5SL|55101|ATP5S-like##NM_001167869|ATP5SL|55101|ATP5S-like##NM_001167870|ATP5SL|55101|ATP5S-like##NM_001167871|ATP5SL|55101|ATP5S-like##NM_018035|ATP5SL|55101|ATP5S-like##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_004363|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5	1.078598	CTCF.p2:20:0.801	CTCF.p2:86:0.278
chr19	51111443	51111564	reg1026085.p1	5.411	+	BC131897 NM_001080457	-40213	-	CU688154 TSC_hg19_v1_chr19_-_51017942 BC066359 NM_001024656	-93638	-	TSC_hg19_v1_chr19_-_51017156 NM_001114598	-94348	-	AL136594 NM_032298	29798	-	NM_001160328 NM_001160329 BC031067 BC028379 TSC_hg19_v1_chr19_-_51143094	31622	-	TSC_hg19_v1_chr19_+_51152634 NM_001195076	41164	+	BC131897|LRRC4B|94030|leucine rich repeat containing 4B##NM_001080457|LRRC4B|94030|leucine rich repeat containing 4B##BC066359|ASPDH|554235|aspartate dehydrogenase domain containing##NM_001024656|ASPDH|554235|aspartate dehydrogenase domain containing##NM_001114598|ASPDH|554235|aspartate dehydrogenase domain containing##AL136594|SYT3|84258|synaptotagmin III##NM_032298|SYT3|84258|synaptotagmin III##NM_001160328|SYT3|84258|synaptotagmin III##NM_001160329|SYT3|84258|synaptotagmin III##BC031067|SYT3|84258|synaptotagmin III##BC028379|SYT3|84258|synaptotagmin III##NM_001195076|C19orf81|342918|chromosome 19 open reading frame 81	0.760251	CTCF.p2:-10:0.760
chr13	33886412	33886513	reg1027233.p2	5.410	+	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	-26595	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-106298	-	AY082590 BC046563 NM_001243466 NM_178007	-126247	-	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	38306	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	364473	-	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	505765	+	AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa	0.0	
chr14	105399841	105399919	reg1020059.p1	5.410	+	TSC_hg19_v1_chr14_+_105391215 AK090449 BC015003	-8655	+	TSC_hg19_v1_chr14_+_105391174 AY358843 NM_138790	-8704	+	TSC_hg19_v1_chr14_+_105391155 AK295352	-8723	+	TSC_hg19_v1_chr14_-_105436817 BC004283 AK094143	36940	-	NM_138420 TSC_hg19_v1_chr14_-_105444718	44828	-	AK057249 NM_174891 BC137495 BC144671	52763	+	BC015003|PLD4|122618|phospholipase D family, member 4##AY358843|PLD4|122618|phospholipase D family, member 4##NM_138790|PLD4|122618|phospholipase D family, member 4##AK295352|PLD4|122618|phospholipase D family, member 4##BC004283|AHNAK2|113146|AHNAK nucleoprotein 2##AK094143|AHNAK2|113146|AHNAK nucleoprotein 2##NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2##AK057249|C14orf79|122616|chromosome 14 open reading frame 79##NM_174891|C14orf79|122616|chromosome 14 open reading frame 79##BC137495|C14orf79|122616|chromosome 14 open reading frame 79##BC144671|C14orf79|122616|chromosome 14 open reading frame 79	0.918057	CTCF.p2:34:0.918
chr2	70343033	70343208	reg1027621.p1	5.410	+	TSC_hg19_v1_chr2_+_70314983 BC013020	-28122	+	AK130439 TSC_hg19_v1_chr2_+_70314932	-28203	+	TSC_hg19_v1_chr2_+_70314854 Z29505 X78137 AB464656 CU691762	-28293	+	TSC_hg19_v1_chr2_-_70418137 BC002825 BC005079 AK000565 NM_017880	75001	-	CU677529 AB528896 BC015944 M77142 TSC_hg19_v1_chr2_-_70475711 NM_022037 NM_022173 AK303345	132599	-	TSC_hg19_v1_chr2_+_70485278 NM_016297 AF181490 BC051891 AY359063 BC033815 AK314453 AK225302 AK303043 BC022259 AB020715 DQ890801 DQ893956 CU689758	142130	+	AK130439|PCBP1|5093|poly(rC) binding protein 1##Z29505|PCBP1|5093|poly(rC) binding protein 1##X78137|PCBP1|5093|poly(rC) binding protein 1##BC002825|C2orf42|54980|chromosome 2 open reading frame 42##BC005079|C2orf42|54980|chromosome 2 open reading frame 42##AK000565|C2orf42|54980|chromosome 2 open reading frame 42##NM_017880|C2orf42|54980|chromosome 2 open reading frame 42##BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_016297|PCYOX1|51449|prenylcysteine oxidase 1##AF181490|PCYOX1|51449|prenylcysteine oxidase 1##BC051891|PCYOX1|51449|prenylcysteine oxidase 1##AY359063|PCYOX1|51449|prenylcysteine oxidase 1##BC033815|PCYOX1|51449|prenylcysteine oxidase 1##AK314453|PCYOX1|51449|prenylcysteine oxidase 1##AK225302|PCYOX1|51449|prenylcysteine oxidase 1##AK303043|PCYOX1|51449|prenylcysteine oxidase 1##BC022259|PCYOX1|51449|prenylcysteine oxidase 1##AB020715|PCYOX1|51449|prenylcysteine oxidase 1##DQ890801|PCYOX1|51449|prenylcysteine oxidase 1##DQ893956|PCYOX1|51449|prenylcysteine oxidase 1	0.023673	
chr2	85085357	85085538	reg1027146.p1	5.410	+	TSC_hg19_v1_chr2_+_84743576 AK094676 NM_001370	-341870	+	NM_003849	-398862	-	AK296741 TSC_hg19_v1_chr2_-_84686396	-399052	-	TSC_hg19_v1_chr2_-_85108209 AK296608 AK309615	22760	-	TSC_hg19_v1_chr2_-_85108241 NM_001080824 BC051789	22856	-	NM_021103 AK130949 D28363 TSC_hg19_v1_chr2_+_85132779 AK311952 BC016731 BC107889 S54005 BC016025 M20259 AY453400	47348	+	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296608|C2orf89|129293|chromosome 2 open reading frame 89##AK309615|C2orf89|129293|chromosome 2 open reading frame 89##NM_001080824|C2orf89|129293|chromosome 2 open reading frame 89##BC051789|C2orf89|129293|chromosome 2 open reading frame 89##NM_021103|TMSB10|9168|thymosin beta 10##AK130949|TMSB10|9168|thymosin beta 10##AK311952|TMSB10|9168|thymosin beta 10##BC016731|TMSB10|9168|thymosin beta 10##BC107889|TMSB10|9168|thymosin beta 10##S54005|TMSB10|9168|thymosin beta 10##BC016025|TMSB10|9168|thymosin beta 10##M20259|TMSB10|9168|thymosin beta 10##AY453400|TMSB10|9168|thymosin beta 10	0.862136	CTCF.p2:4:0.862
chr10	72032706	72032844	reg1027423.p1	5.409	+	AF108211 AB590125 AF217186 DQ893597 AB026723 TSC_hg19_v1_chr10_-_71993148 BC107882 AF154065 BC105034 BC105036 AF092439 AF119665 BC001022 BC061581 AK058193 NM_021129	-39622	-	TSC_hg19_v1_chr10_-_71930260 AK298591 AK312469 BC003658 AF274026 AF087897 AF217959 AF261717 AY008268 AL136724 NM_001142648 NM_020150	-102496	-	TSC_hg19_v1_chr10_-_71906457 BC047424 NM_001040273 NM_173555	-126295	-	NM_022146	10674	-	TSC_hg19_v1_chr10_-_72083680 AL122117	50923	-	BC024001 AY358318 NM_207119	108605	-	AF108211|PPA1|5464|pyrophosphatase (inorganic) 1##AF217186|PPA1|5464|pyrophosphatase (inorganic) 1##DQ893597|PPA1|5464|pyrophosphatase (inorganic) 1##AB026723|PPA1|5464|pyrophosphatase (inorganic) 1##BC107882|PPA1|5464|pyrophosphatase (inorganic) 1##AF154065|PPA1|5464|pyrophosphatase (inorganic) 1##BC105034|PPA1|5464|pyrophosphatase (inorganic) 1##BC105036|PPA1|5464|pyrophosphatase (inorganic) 1##AF092439|PPA1|5464|pyrophosphatase (inorganic) 1##AF119665|PPA1|5464|pyrophosphatase (inorganic) 1##BC001022|PPA1|5464|pyrophosphatase (inorganic) 1##BC061581|PPA1|5464|pyrophosphatase (inorganic) 1##AK058193|PPA1|5464|pyrophosphatase (inorganic) 1##NM_021129|PPA1|5464|pyrophosphatase (inorganic) 1##AK298591|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AK312469|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##BC003658|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF274026|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF087897|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF217959|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF261717|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AY008268|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AL136724|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##NM_001142648|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##NM_020150|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##BC047424|TYSND1|219743|trypsin domain containing 1##NM_001040273|TYSND1|219743|trypsin domain containing 1##NM_173555|TYSND1|219743|trypsin domain containing 1##NM_022146|NPFFR1|64106|neuropeptide FF receptor 1##AL122117|LRRC20|55222|leucine rich repeat containing 20##BC024001|LRRC20|55222|leucine rich repeat containing 20##AY358318|LRRC20|55222|leucine rich repeat containing 20##NM_207119|LRRC20|55222|leucine rich repeat containing 20	0.0	
chr11	84876996	84877111	reg1024100.p1	5.409	+	U32376 AB209252 AK295094 NM_001364	-242603	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	-242821	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	-848672	-	CR749820 NM_001142699	461260	-	NM_001193537 NM_001193538 NM_018480 TSC_hg19_v1_chr11_+_85339636 AK298189 BC017574 BC107900 AF220193 AF246240 AK291150 BC038933 BC012065	462593	+	NM_001244735 NM_032273 AL136941 AK312081 BC007875	481950	+	U32376|DLG2|1740|discs, large homolog 2 (Drosophila)##AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##CR749820|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142699|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001193537|TMEM126B|55863|transmembrane protein 126B##NM_001193538|TMEM126B|55863|transmembrane protein 126B##NM_018480|TMEM126B|55863|transmembrane protein 126B##AK298189|TMEM126B|55863|transmembrane protein 126B##BC017574|TMEM126B|55863|transmembrane protein 126B##BC107900|TMEM126B|55863|transmembrane protein 126B##AF220193|TMEM126B|55863|transmembrane protein 126B##AF246240|TMEM126B|55863|transmembrane protein 126B##AK291150|TMEM126B|55863|transmembrane protein 126B##BC038933|TMEM126B|55863|transmembrane protein 126B##BC012065|TMEM126B|55863|transmembrane protein 126B##NM_001244735|TMEM126A|84233|transmembrane protein 126A##NM_032273|TMEM126A|84233|transmembrane protein 126A##AL136941|TMEM126A|84233|transmembrane protein 126A##AK312081|TMEM126A|84233|transmembrane protein 126A##BC007875|TMEM126A|84233|transmembrane protein 126A	0.010103	
chr20	37563968	37564093	reg1026349.p1	5.409	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-8962	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-9041	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	-129676	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	26959	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1753847	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	2093464	+	AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I	0.993589	CTCF.p2:6:0.994
chr8	108792158	108792263	reg1025955.p2	5.409	+	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	-282022	-	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	-1009766	-	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	-1053855	+	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	303664	-	AB527268 CR457029 CR542275 CU674376 CU677689 CU678957 DQ892278 DQ895478 BC000734 TSC_hg19_v1_chr8_-_109260938 U54562 U85947	468724	-	TSC_hg19_v1_chr8_-_109260947 BC017887 AK313186 BC005944 BC016706 BC021679 U94175 U62962 BC008419 NM_001568 AK310902	468775	-	U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1##AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2##CR457029|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR542275|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ892278|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ895478|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC000734|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U54562|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U85947|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC017887|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK313186|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC005944|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC016706|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC021679|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U94175|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U62962|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC008419|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##NM_001568|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK310902|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E	0.999205	CTCF.p2:-15:0.999
chr11	16653882	16654002	reg1026680.p2	5.408	+	AF309034 NM_033326	-156017	-	BC037866 NM_001145811	-223515	-	AL136780 AK310506 BC047064 NM_001145819 NM_017508	-229541	-	NM_014267 TSC_hg19_v1_chr11_+_16760165	106218	+	TSC_hg19_v1_chr11_+_16760204 BC103747 AK315382 BC007103 BC016352 BC020937 U51678 CR456882 CU675547 AK124165	106342	+	TSC_hg19_v1_chr11_-_16996590 D28414	342634	-	AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##NM_014267|C11orf58|10944|chromosome 11 open reading frame 58##BC103747|C11orf58|10944|chromosome 11 open reading frame 58##AK315382|C11orf58|10944|chromosome 11 open reading frame 58##BC007103|C11orf58|10944|chromosome 11 open reading frame 58##BC016352|C11orf58|10944|chromosome 11 open reading frame 58##BC020937|C11orf58|10944|chromosome 11 open reading frame 58##U51678|C11orf58|10944|chromosome 11 open reading frame 58##CR456882|C11orf58|10944|chromosome 11 open reading frame 58##D28414|RPL36A|6173|ribosomal protein L36a	0.948556	CTCF.p2:-7:0.949
chr2	34237933	34238040	reg1026869.p2	5.408	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-413641	-	AB020653 NM_015376	-499045	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-536290	+	TSC_hg19_v1_chr2_+_36582920 AY358371	2344976	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	2345416	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	2587296	-	BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	0.0	
chr9	1101090	1101195	reg1026222.p1	5.408	+	AF130729 NM_181872	-50533	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-50772	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-50798	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	914154	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	1520665	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	1520932	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.129052	
chr16	14404585	14404766	reg1025450.p1	5.407	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-110477	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-124157	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-239589	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	319353	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	319458	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	322064	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.010076	
chr2	81080010	81080121	reg1025131.p2	5.407	+	TSC_hg19_v1_chr2_-_80531838 AK225779	-548222	-	TSC_hg19_v1_chr2_-_80531719 AK290512	-548340	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	-548540	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	3606305	-	AK296741 TSC_hg19_v1_chr2_-_84686396	3606330	-	NM_003849	3606520	-	AK225779|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit	0.147934	
chr3	69021660	69021749	reg1024740.p1	5.407	+	BC031566 TSC_hg19_v1_chr3_-_68981699 AY325117 NM_001005527 NM_182522	-39987	-	NM_213609 AK289668 AK290446 BC025746	-968299	+	AY325114 NM_001252216	-980971	+	TSC_hg19_v1_chr3_-_69037499 AK123213	15802	-	TSC_hg19_v1_chr3_-_69062806 BC060887 NM_173654 AK304102 BX648818	41097	-	AB384853 L01042 BC117418 BC126123 BC143840 TSC_hg19_v1_chr3_-_69101449 AK299020 BC033771 BC008454 AK312697 AB209109 NM_007114	79681	-	BC031566|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##AY325117|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##NM_001005527|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##NM_182522|FAM19A4|151647|family with sequence similarity 19 (chemokine (C-C motif)-like), member A4##NM_213609|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AK289668|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AK290446|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##BC025746|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AY325114|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##NM_001252216|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##AK123213|C3orf64|285203|chromosome 3 open reading frame 64##BC060887|C3orf64|285203|chromosome 3 open reading frame 64##NM_173654|C3orf64|285203|chromosome 3 open reading frame 64##AK304102|C3orf64|285203|chromosome 3 open reading frame 64##BX648818|C3orf64|285203|chromosome 3 open reading frame 64##L01042|TMF1|7110|TATA element modulatory factor 1##BC117418|TMF1|7110|TATA element modulatory factor 1##BC126123|TMF1|7110|TATA element modulatory factor 1##BC143840|TMF1|7110|TATA element modulatory factor 1##AK299020|TMF1|7110|TATA element modulatory factor 1##BC033771|TMF1|7110|TATA element modulatory factor 1##BC008454|TMF1|7110|TATA element modulatory factor 1##AK312697|TMF1|7110|TATA element modulatory factor 1##AB209109|TMF1|7110|TATA element modulatory factor 1##NM_007114|TMF1|7110|TATA element modulatory factor 1	0.996815	CTCF.p2:18:0.997
chr5	178266493	178266600	reg1027206.p1	5.407	+	AK290711 BC036517 TSC_hg19_v1_chr5_-_178157661 D89928 BC047105 AK128881 AF116030 NM_005649	-108878	-	TSC_hg19_v1_chr5_-_178054103 AK308674	-212423	-	TSC_hg19_v1_chr5_-_178054072 AK308879 AK309215 BC151233 AK308578	-212466	-	TSC_hg19_v1_chr5_+_178287000 BC022190 BC036466 NM_058230 AK057737 AK289667	20453	+	AK131367 NM_030613 TSC_hg19_v1_chr5_+_178322918 BC142989	56375	+	NM_001178089 NM_001178090 NM_182594 AK094763 AK292317 AX721148	101669	+	AK290711|ZNF354A|6940|zinc finger protein 354A##BC036517|ZNF354A|6940|zinc finger protein 354A##D89928|ZNF354A|6940|zinc finger protein 354A##BC047105|ZNF354A|6940|zinc finger protein 354A##AF116030|ZNF354A|6940|zinc finger protein 354A##NM_005649|ZNF354A|6940|zinc finger protein 354A##AK308674|CLK4|57396|CDC-like kinase 4##AK308879|CLK4|57396|CDC-like kinase 4##BC151233|CLK4|57396|CDC-like kinase 4##BC022190|ZNF354B|117608|zinc finger protein 354B##BC036466|ZNF354B|117608|zinc finger protein 354B##NM_058230|ZNF354B|117608|zinc finger protein 354B##AK057737|ZNF354B|117608|zinc finger protein 354B##AK289667|ZNF354B|117608|zinc finger protein 354B##AK131367|ZFP2|80108|zinc finger protein 2 homolog (mouse)##NM_030613|ZFP2|80108|zinc finger protein 2 homolog (mouse)##BC142989|ZFP2|80108|zinc finger protein 2 homolog (mouse)##NM_001178089|ZNF454|285676|zinc finger protein 454##NM_001178090|ZNF454|285676|zinc finger protein 454##NM_182594|ZNF454|285676|zinc finger protein 454##AK094763|ZNF454|285676|zinc finger protein 454##AK292317|ZNF454|285676|zinc finger protein 454	0.991126	CTCF.p2:7:0.991
chr1	157333482	157333602	reg1025834.p1	5.406	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-225259	-	TSC_hg19_v1_chr1_-_157108158 L16464	-225392	-	AK131392 NM_001004341	-263943	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	188688	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	234259	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	336985	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.793609	CTCF.p2:-4:0.794
chr1	188098084	188098218	reg1025888.p1	5.406	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-1300063	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-1448661	-	M33478 NM_002597	-1667924	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	2348584	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	4029452	+	AY643711 NM_001039152	4187970	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.070324	
chr12	108729619	108729800	reg1026562.p2	5.406	+	NM_001142345	-15271	-	BC110330 AB018332 NM_014653	-206222	+	AY238895 NM_203436	-561548	+	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	3375	-	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	179373	+	AB385287 D63879 TSC_hg19_v1_chr12_-_108954936 BC103706 BC093784 BC111983 BC143253 BC004547 BC024279 AB020880 AF387506 BC032601	225225	-	NM_001142345|CMKLR1|1240|chemokine-like receptor 1##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing##D63879|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC103706|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC093784|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC111983|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC143253|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC004547|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC024279|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AB020880|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AF387506|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC032601|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3	0.0	
chr6	77883314	77883398	reg1024030.p1	5.406	+	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	-1101057	-	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-1424347	+	TSC_hg19_v1_chr6_+_76458926 NM_004999 BX647397 BC012598	-1424440	+	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	289793	-	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	1693899	+	BC064611 TSC_hg19_v1_chr6_-_79675737 AK000712	1792396	-	HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_004999|MYO6|4646|myosin VI##BX647397|MYO6|4646|myosin VI##BC012598|MYO6|4646|myosin VI##BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC064611|PHIP|55023|pleckstrin homology domain interacting protein##AK000712|PHIP|55023|pleckstrin homology domain interacting protein	0.745136	CTCF.p2:1:0.745
chr6	100932384	100932565	reg1026891.p1	5.405	+	NM_005068 U70212	-20924	-	AK123634 NM_001040179 NM_032503 AF347063	-490364	-	AY004253 NM_021620	-877825	+	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	396626	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	396742	-	TSC_hg19_v1_chr6_-_101329241 BC026066 AK299117	396769	-	NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC026066|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK299117|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.040213	
chr6	168771076	168771175	reg1025046.p1	5.405	+	BC111764 BC111790 AF318336 NM_214462 TSC_hg19_v1_chr6_-_168720424 BC092498	-50714	-	BC137144 AK097179 NM_024919 AK074110	-291299	-	NM_001122841 AK097579	-294587	-	TSC_hg19_v1_chr6_+_168841832 BC028420 NM_001166412 NM_022138	70710	+	TSC_hg19_v1_chr6_+_168841866 BC047583 AJ420521 AK314613	70737	+	TSC_hg19_v1_chr6_+_168841879 AK056700 AL832303 AB014730 AB014737	70826	+	BC111764|DACT2|168002|dapper, antagonist of beta-catenin, homolog 2 (Xenopus laevis)##BC111790|DACT2|168002|dapper, antagonist of beta-catenin, homolog 2 (Xenopus laevis)##AF318336|DACT2|168002|dapper, antagonist of beta-catenin, homolog 2 (Xenopus laevis)##NM_214462|DACT2|168002|dapper, antagonist of beta-catenin, homolog 2 (Xenopus laevis)##BC092498|DACT2|168002|dapper, antagonist of beta-catenin, homolog 2 (Xenopus laevis)##BC137144|FRMD1|79981|FERM domain containing 1##AK097179|FRMD1|79981|FERM domain containing 1##NM_024919|FRMD1|79981|FERM domain containing 1##AK074110|FRMD1|79981|FERM domain containing 1##NM_001122841|FRMD1|79981|FERM domain containing 1##AK097579|FRMD1|79981|FERM domain containing 1##BC028420|SMOC2|64094|SPARC related modular calcium binding 2##NM_001166412|SMOC2|64094|SPARC related modular calcium binding 2##NM_022138|SMOC2|64094|SPARC related modular calcium binding 2##BC047583|SMOC2|64094|SPARC related modular calcium binding 2##AJ420521|SMOC2|64094|SPARC related modular calcium binding 2##AK314613|SMOC2|64094|SPARC related modular calcium binding 2##AK056700|SMOC2|64094|SPARC related modular calcium binding 2##AL832303|SMOC2|64094|SPARC related modular calcium binding 2##AB014730|SMOC2|64094|SPARC related modular calcium binding 2##AB014737|SMOC2|64094|SPARC related modular calcium binding 2	0.999806	CTCF.p2:1:1.000
chr10	32939204	32939305	reg1025157.p1	5.404	+	AK023093 NM_024688 BC125090 BC125091	-82548	+	TSC_hg19_v1_chr10_+_32735092 NM_001026383 NM_145023 AK057324 BC042672 BC022020	-204192	+	AF286905 AK309309 AK299676 TSC_hg19_v1_chr10_-_32667698	-271617	-	AB463074 AM393197 CU676490 DQ891069 DQ894251 NM_033668	285231	-	TSC_hg19_v1_chr10_-_33246826 NM_133376	307580	-	TSC_hg19_v1_chr10_-_33247146 BC020057 AK291697 BX537407	307885	-	AK023093|C10orf68|79741|chromosome 10 open reading frame 68##NM_024688|C10orf68|79741|chromosome 10 open reading frame 68##BC125090|C10orf68|79741|chromosome 10 open reading frame 68##BC125091|C10orf68|79741|chromosome 10 open reading frame 68##NM_001026383|CCDC7|221016|coiled-coil domain containing 7##NM_145023|CCDC7|221016|coiled-coil domain containing 7##AK057324|CCDC7|221016|coiled-coil domain containing 7##BC042672|CCDC7|221016|coiled-coil domain containing 7##BC022020|CCDC7|221016|coiled-coil domain containing 7##AF286905|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AK309309|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AK299676|EPC1|80314|enhancer of polycomb homolog 1 (Drosophila)##AM393197|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##DQ891069|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##DQ894251|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##NM_033668|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##NM_133376|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BC020057|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##AK291697|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BX537407|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)	0.0	
chr11	74199074	74199177	reg1024560.p2	5.404	+	CR936625 DQ192291 NM_005472	-20529	-	TSC_hg19_v1_chr11_-_74109469 BC027950 AB019210 AK056591 BC059360 NM_173582	-89635	-	BC089446 TSC_hg19_v1_chr11_-_74022686 BC040582 AL833965 AY358521 AK300598 AY327887 BC117333 BC126170 AY313448 NM_182904	-176443	-	TSC_hg19_v1_chr11_-_74204756 NM_001144869	5625	-	AK302677 AK316370 D26018 NM_006591 TSC_hg19_v1_chr11_+_74303654 BC092454 AK316301 BC108908 BC108909 BC032636 BC058840 BC041703 AB383722	104538	+	NM_015424 AK304519 AY358522 AY279090 AY279091	243080	-	CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##AB019210|PGM2L1|283209|phosphoglucomutase 2-like 1##AK056591|PGM2L1|283209|phosphoglucomutase 2-like 1##BC059360|PGM2L1|283209|phosphoglucomutase 2-like 1##NM_173582|PGM2L1|283209|phosphoglucomutase 2-like 1##BC089446|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC040582|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AL833965|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY358521|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AK300598|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY327887|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC117333|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC126170|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY313448|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##NM_182904|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##NM_001144869|LIPT2|387787|lipoyl(octanoyl) transferase 2 (putative)##AK302677|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316370|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##D26018|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_006591|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC092454|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316301|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108908|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108909|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC032636|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC058840|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC041703|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_015424|CHRDL2|25884|chordin-like 2##AK304519|CHRDL2|25884|chordin-like 2##AY358522|CHRDL2|25884|chordin-like 2##AY279090|CHRDL2|25884|chordin-like 2##AY279091|CHRDL2|25884|chordin-like 2	0.750537	CTCF.p2:-1:0.751
chr1	27019559	27019740	reg1026661.p3	5.404	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	-147291	+	TSC_hg19_v1_chr1_+_26872335 AK092955	-147326	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-163314	+	NM_006015 NM_139135 AF231056	2873	+	AB210022 AF219114 AB051293 AF265208 TSC_hg19_v1_chr1_+_27024003	4320	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	81639	+	AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.0	
chr17	30334317	30334428	reg1023215.p2	5.404	+	AB385289 TSC_hg19_v1_chr17_+_30264319	-70078	+	TSC_hg19_v1_chr17_+_30264164 BC015704	-70209	+	TSC_hg19_v1_chr17_+_30264067 D63881 BC018583	-70297	+	AY386261 AK302740 BC117373 BC143578 BC143581 AK310287 NM_052888 HQ258530 AJ314647	13721	+	TSC_hg19_v1_chr17_+_30469463 BC060781 NM_001033566 NM_001033568 NM_018307 AJ496730	135056	+	TSC_hg19_v1_chr17_+_30469520 BC041114	135150	+	BC015704|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)##D63881|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)##BC018583|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)##AY386261|LRRC37B|114659|leucine rich repeat containing 37B##AK302740|LRRC37B|114659|leucine rich repeat containing 37B##BC117373|LRRC37B|114659|leucine rich repeat containing 37B##BC143578|LRRC37B|114659|leucine rich repeat containing 37B##BC143581|LRRC37B|114659|leucine rich repeat containing 37B##AK310287|LRRC37B|114659|leucine rich repeat containing 37B##NM_052888|LRRC37B|114659|leucine rich repeat containing 37B##HQ258530|LRRC37B|114659|leucine rich repeat containing 37B##AJ314647|LRRC37B|114659|leucine rich repeat containing 37B##BC060781|RHOT1|55288|ras homolog gene family, member T1##NM_001033566|RHOT1|55288|ras homolog gene family, member T1##NM_001033568|RHOT1|55288|ras homolog gene family, member T1##NM_018307|RHOT1|55288|ras homolog gene family, member T1##AJ496730|RHOT1|55288|ras homolog gene family, member T1##BC041114|RHOT1|55288|ras homolog gene family, member T1	0.926846	CTCF.p2:-28:0.713	CTCF.p2:44:0.214
chr2	206768625	206768721	reg1025627.p1	5.404	+	TSC_hg19_v1_chr2_+_206547371 AK290934	-221312	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	-221495	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-1357954	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	182238	-	AK295987 NM_001199984	255244	-	X61100 AK098395 BC018900 BC022368 TSC_hg19_v1_chr2_-_207024145 AK300585 BC030833 AK295705 AK295966 AK298320 BC004133 NM_001199981 NM_001199982 NM_001199983 NM_005006	255499	-	AK290934|NRP2|8828|neuropilin 2##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D##AK295987|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199984|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	0.01608	
chr7	21293789	21293908	reg1025894.p1	5.404	+	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	-467314	-	TSC_hg19_v1_chr7_-_20826429 AK299947	-467420	-	TSC_hg19_v1_chr7_-_20825382 AB464710	-468466	-	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	173971	+	AB591008 TSC_hg19_v1_chr7_+_21468356	174476	+	AJ320497 NM_003777	288984	+	AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor##AK299947|SP8|221833|Sp8 transcription factor##AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11	0.517584	CTCF.p2:24:0.518
chr5	35202581	35202689	reg1024544.p2	5.403	+	NM_001204314 NM_001204315 NM_001204316 NM_001204317 NM_001204318	-84412	-	NM_031900	-154396	-	TSC_hg19_v1_chr5_+_34929697 AY177688 AY258422 BC065745 NM_001012339 NM_194283	-272943	+	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	27942	-	NM_000949	28187	-	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	415374	+	NM_001204314|PRLR|5618|prolactin receptor##NM_001204315|PRLR|5618|prolactin receptor##NM_001204316|PRLR|5618|prolactin receptor##NM_001204317|PRLR|5618|prolactin receptor##NM_001204318|PRLR|5618|prolactin receptor##NM_031900|AGXT2|64902|alanine--glyoxylate aminotransferase 2##AY177688|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##AY258422|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##BC065745|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_001012339|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_194283|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##NM_000949|PRLR|5618|prolactin receptor##BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2	0.970191	CTCF.p2:4:0.970
chr6_ssto_hap7	3730048	3730114	reg1022120.p1	5.403	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.101968	
chr13	40621603	40621784	reg1022045.p2	5.402	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-391832	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-444331	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-444366	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	619019	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	723599	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	723639	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.0	
chr8	102108813	102108941	reg1025400.p1	5.402	+	TSC_hg19_v1_chr8_-_101965608 NM_003406	-143254	-	TSC_hg19_v1_chr8_-_101965595 M86400	-143301	-	TSC_hg19_v1_chr8_-_101965198 NM_001135699	-143651	-	BC035233 TSC_hg19_v1_chr8_-_102217845 BC015925 AF125099 AF275802 AF275809 AK290477 BC068524	108816	-	TSC_hg19_v1_chr8_-_102217877 NM_001042511	108999	-	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	109077	-	NM_003406|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##M86400|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135699|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##BC035233|ZNF706|51123|zinc finger protein 706##BC015925|ZNF706|51123|zinc finger protein 706##AF125099|ZNF706|51123|zinc finger protein 706##AF275802|ZNF706|51123|zinc finger protein 706##AF275809|ZNF706|51123|zinc finger protein 706##AK290477|ZNF706|51123|zinc finger protein 706##BC068524|ZNF706|51123|zinc finger protein 706##NM_001042511|ZNF706|51123|zinc finger protein 706##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706	0.027663	
chrX	149654427	149654539	reg1027340.p1	5.402	+	NM_001177466 NM_005491 U46023 BC136324 AB527434 AK315217	-40701	+	TSC_hg19_v1_chrX_+_149531583 NM_001177465 AK294478	-122921	+	TSC_hg19_v1_chrX_+_149529838 AK302612	-124650	+	TSC_hg19_v1_chrX_+_149737070 NM_000252 AK291710 U46024 AK297057 AK304036	82563	+	AL832715 AK297021 BC030779 TSC_hg19_v1_chrX_+_149737092	82621	+	TSC_hg19_v1_chrX_+_149861868 BC032947 NM_003828 AK226109 AF057354 AJ224979	207438	+	NM_001177466|MAMLD1|10046|mastermind-like domain containing 1##NM_005491|MAMLD1|10046|mastermind-like domain containing 1##U46023|MAMLD1|10046|mastermind-like domain containing 1##BC136324|MAMLD1|10046|mastermind-like domain containing 1##AK315217|MAMLD1|10046|mastermind-like domain containing 1##NM_001177465|MAMLD1|10046|mastermind-like domain containing 1##AK294478|MAMLD1|10046|mastermind-like domain containing 1##AK302612|MAMLD1|10046|mastermind-like domain containing 1##NM_000252|MTM1|4534|myotubularin 1##AK291710|MTM1|4534|myotubularin 1##U46024|MTM1|4534|myotubularin 1##AK297057|MTM1|4534|myotubularin 1##AK304036|MTM1|4534|myotubularin 1##AL832715|MTM1|4534|myotubularin 1##AK297021|MTM1|4534|myotubularin 1##BC030779|MTM1|4534|myotubularin 1##BC032947|MTMR1|8776|myotubularin related protein 1##NM_003828|MTMR1|8776|myotubularin related protein 1##AK226109|MTMR1|8776|myotubularin related protein 1##AF057354|MTMR1|8776|myotubularin related protein 1##AJ224979|MTMR1|8776|myotubularin related protein 1	0.981957	CTCF.p2:0:0.982
chr2	17329717	17329825	reg1027237.p1	5.401	+	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	-482627	-	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-1247604	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-1247776	+	DQ860102 NM_001099218	369934	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	392116	+	TSC_hg19_v1_chr2_+_17721989 AF039555 U14747 AB001104	392249	+	BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1##AF039555|VSNL1|7447|visinin-like 1##U14747|VSNL1|7447|visinin-like 1##AB001104|VSNL1|7447|visinin-like 1	0.843237	CTCF.p2:-10:0.843
chr10	43700704	43700854	reg1005069.p2	5.400	+	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	-66837	+	TSC_hg19_v1_chr10_+_43572516 NM_020630 NM_020975 BC003072 BC004257 X15262 AK291807 AB384817 CU678360 CU678648 Y12528	-128176	+	TSC_hg19_v1_chr10_+_43278248 AK308420 BC043345	-422529	+	BC022548 NM_145313	61587	-	BC054876 AY358584 NM_001184963 NM_173160	166311	+	TSC_hg19_v1_chr10_-_43892200 NM_001098208	191440	-	AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_020630|RET|5979|ret proto-oncogene##NM_020975|RET|5979|ret proto-oncogene##BC003072|RET|5979|ret proto-oncogene##BC004257|RET|5979|ret proto-oncogene##X15262|RET|5979|ret proto-oncogene##AK291807|RET|5979|ret proto-oncogene##Y12528|RET|5979|ret proto-oncogene##AK308420|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC043345|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC022548|RASGEF1A|221002|RasGEF domain family, member 1A##NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A##BC054876|FXYD4|53828|FXYD domain containing ion transport regulator 4##AY358584|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001184963|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_173160|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F	1.105919	CTCF.p2:-31:0.452	CTCF.p2:32:0.538
chr14	107117785	107117874	reg1024355.p2	5.400	+	DQ454926 GU552751 DQ523845 DQ454743 DQ454741 FJ873884 FJ873949 FJ874082 DQ454745 AY003790 EU350425 EU667608 EF407835 DQ454756 DQ454758 DQ322814 AF343367 AF343413 AF103266 AJ007443 AF103288 FJ385341 AF103034 AF103338 AF062236 JN110970 L03820 HM774324 HM774398 HM774726 HM774904 HM774928 L33041 HM775043 AF408742 AF485449 AF078936 AF485451 AF485453 AF485455 EF633815 DQ524036 DQ524153 DQ926062 HM995709 HM995710 HM995711 HM995712 HM995713 HM995863 HM995864 HM995866 DQ322813 HM996268 AJ245306 AY044149 DQ100802 DQ100910 DQ926129 AB063797 AB063898 AB063899 AF022008 AF099199 AF398961 AF471517 AF471518 AF471519 AF471520 AJ224899 AJ399811 AY554175 AY640527 DQ065678 DQ535356 DQ779565 DQ779566 FJ385288 FN563805 FN563806 FN563810 FN563812 FN563827 FN563828 HQ689733 JF806286 X77017 L48239 AY392926 AY393064 AY452138 X65898 X81752 X81753 BC073782 AF067420 TSC_hg19_v1_chr14_-_107114275 AK097071	-3720	-	S76904 AM279575 EU619960 JN110911 JN111008 HM774600 HM774602 AF103144 AF103285 AY866748 AY866803 DQ187673 DQ187733 DQ322974 DQ840851 DQ840858 DQ840864 AF006522 AF233250 AF471440 EF177980 EU835549 AB063812 AJ399808 AJ579268 DQ205169 DQ535364 DQ535448 DQ926460 Z98683 Z98702 AJ519260 AJ519262 AJ519304 AY392915 AF062171 TSC_hg19_v1_chr14_-_107099662 AK097355 AK097366 AK093636 AK097572 AX748235	-18306	-	AF460776 EF583680 DQ454729 DQ454436 HM995491 DQ454495 DQ454638 DQ454782 DQ523857 DQ454730 DQ454735 DQ454736 DQ454850 DQ454463 DQ454626 DQ454634 DQ454779 AY003758 DQ454909 AY003782 DQ454387 DQ454439 DQ454443 DQ454491 DQ454630 DQ454640 DQ454657 DQ454658 DQ454693 DQ454996 DQ523865 DQ523866 DQ523904 DQ523907 GU552723 GU552763 DQ454683 DQ454954 AY003756 AY003861 DQ454803 DQ454883 DQ454908 DQ454931 DQ454981 Z30558 Z30559 Z30575 Z30577 Z30579 Z30673 DQ454894 HM995480 DQ454567 DQ454586 DQ454595 DQ454611 DQ454623 DQ454649 DQ454661 DQ454790 DQ454858 DQ454930 DQ454940 DQ523860 M18514 AY003863 AY003854 DQ454390 DQ454444 DQ454650 DQ454684 DQ454709 DQ454717 DQ454721 DQ454733 DQ454737 DQ454855 DQ454887 DQ454933 DQ454936 DQ454963 DQ454984 DQ454994 DQ523863 DQ454447 DQ454504 DQ454539 DQ454596 DQ454609 DQ454613 DQ454619 DQ454633 DQ454656 DQ454672 DQ454720 DQ454886 DQ454942 DQ454972 DQ454977 HM116187 DQ454605 DQ454646 DQ454702 DQ454703 DQ454851 HM116123 HM116135 HM116139 HM116144 HM116147 HM116154 HM116217 AY003860 DQ454602 DQ454880 DQ454822 DQ454825 EF091925 EF175400 EF175422 EF175440 EF583671 EU667610 EU814956 GQ232848 GQ232850 GQ232880 DQ454435 EU099241 EU099155 EU099196 AY577297 AY393172 DQ523932 DQ524057 EU099215 EU099224 AM183980 AY393168 AY393171 AY393176 AY393177 AY393178 AM279541 AF103075 AF103349 AF103054 AY180386 AF103162 FJ385403 JN110682 JN110887 AF103140 FJ385332 FJ385336 FJ385376 FJ385404 FJ385416 FJ385417 FJ385421 GQ504863 L26904 AF103343 AF103091 EU620035 AF103271 EU146313 U00585 EU620063 DQ926547 AY062314 U00553 U00557 AF103164 AF103228 DQ005270 HM995488 AY671631 HM996467 AJ245067 DQ523945 DQ523951 DQ523954 DQ523969 DQ523970 DQ523977 DQ523979 DQ524002 DQ524011 DQ524015 DQ524019 DQ524040 DQ524042 DQ524043 DQ524052 DQ524055 DQ524072 DQ524087 DQ524090 DQ524092 DQ524099 DQ524100 DQ524104 DQ524108 DQ524110 DQ524124 DQ524133 AM233755 DQ926051 DQ926252 AB067262 AJ300799 AY671719 AY941873 AY944692 AY944703 AY944704 AY944722 DQ005289 DQ005293 DQ005305 EF178085 FJ385391 HM995323 HM995324 HM995327 HM995330 HM995345 HM995347 HM995388 HM995403 HM995478 HM995483 HM995484 HM995485 HM995486 HM995487 HM995498 HM995499 HM995500 HM995502 HM995534 HM995551 HM995556 HM995557 HM995559 HM995560 HM995932 HM995933 HM995957 HM995994 HM996010 HM996122 HM996155 HM996464 HM996496 AB063721 AB063723 AB063729 AB063744 AB063787 AB063920 AB066903 AB066912 AB066913 AB067270 AB067272 AB067275 AB067296 AF021963 AF035041 AF062230 AF174018 AF174072 AF174080 AF174097 AF174119 AJ006351 AJ239343 AJ244983 AJ245027 AJ413991 AJ413998 AJ413999 AJ574780 AM279612 AY345917 AY640510 AY670733 AY670744 AY670820 AY670910 AY670915 AY670930 AY670942 AY670967 AY670984 AY671004 AY671056 AY671062 AY671072 AY671075 AY671076 AY671082 AY671085 AY671088 AY671194 AY671221 AY671255 AY671326 AY671337 AY671343 AY671346 AY671353 AY671356 AY671359 AY671373 AY671376 AY671378 AY671394 AY671456 AY671457 AY671458 AY671459 AY671460 AY671463 AY671467 AY671470 AY671472 AY671473 AY671476 AY671485 AY671488 AY671493 AY671494 AY671575 AY671588 AY671589 AY671601 AY671606 AY671628 AY671645 AY671666 AY671667 AY671674 AY671692 AY671710 AY671715 AY671717 AY671759 AY866865 AY986386 AY986387 AY986388 AY986389 AY986390 DQ005263 DQ005287 DQ005288 DQ100795 DQ328873 DQ431484 DQ431485 DQ926085 DQ926130 DQ926178 DQ926219 DQ926256 DQ926258 DQ926290 DQ926310 DQ926368 DQ926395 DQ926514 DQ926572 DQ926640 DQ926644 EU794431 FJ385318 FJ456850 GU570380 GU570382 HQ378396 HQ689744 JF806450 L12189 L12197 L23516 L23517 L23563 S73508 U00486 U00493 U31937 U43927 U51549 U95241 U96283 X98749 Z70613 Z70615 Z70628 Z70629 Z70651 Z70652 Z70653 Z70658 Z74672 Z74674 Z74681 Z74682 Z74683 Z74684 Z74685 Z74686 Z74687 Z74688 Z74689 Z74690 DQ926105 AY686879 AY944715 DQ535399 DQ535425 DQ535434 DQ535441 DQ535468 DQ535469 DQ535474 EF177985 EF178038 EF178125 HM996104 HM996425 HM996431 HM996435 Z14199 Z75403 AY392942 AY393076 AY393081 AY393082 Z47242 AY671167 AF062106 AF062108 AF062109 AF062126 AF062129 AF062132 AF062144 AF062166 AF062185 AF062209 AF062228 AF062252 AF062266 AY671032 AY671186 AY671196 AY671241 AY671258 AY671290 AY671296 M88500 S46247 U44791 U86525 X52111 Z11958 Z47349 Z75395 M18518 BC066594 S50735 TSC_hg19_v1_chr14_-_107083721 AK097365 X67906 X69860 X69866 AK097362 BX248300 AK125079	-34252	-	AF103081 JN110643 JN110687 GQ504895 GQ504960 HM774028 HM774358 HM774582 HM774889 X98961 AF165107 AY423163 AF485471 AF485473 AJ306675 AY423172 FN563800 EF633801 HM994977 HM994995 HM995120 HM995247 HM995290 HM995392 HM995519 HM995754 HM995991 HM996039 HM996369 AY866776 DQ322973 DQ926438 AF471404 AJ245345 AJ401162 AM279604 AY866777 DQ100932 DQ100975 DQ926053 DQ926476 GU570357 L19914 Z96976 AB067024 AB067127 AB363182 AB373619 AF231404 AF471217 AF471316 AF471319 AF471331 AF471353 AJ519231 AJ556646 AJ556650 AY640562 AY866705 AY866733 AY971141 DQ065617 DQ065721 DQ100842 DQ535272 DQ535332 DQ926279 EF633803 EF633809 EF633824 EF633825 FJ385293 FJ492933 FN563769 FN563801 FN563814 FN563817 FN563830 FN563831 L38018 Y08405 Y08406 Z96975 Z98724 AJ519258 AJ519228 AJ519314 AJ519323 AJ519243 AJ519280 AJ519310 AJ519335 AJ519268 AJ519313 X62126 TSC_hg19_v1_chr14_-_107122620	4660	-	GQ232991 EU814957 AY003867 GQ233006 AY003724 AY003757 FJ840009 GU552709 AY003791 FJ840366 JF810271 FJ840139 FJ874031 AF017464 HM774748 HM775002 HQ704029 DQ524134 DQ840815 DQ840856 AY530312 AY941926 AY986399 DQ100849 AB067106 AB363089 DQ535377 U00563 U64502 AY392909 AY393069 AY393070 AF062111 AF062168 X81739 X81750 Z14221 TSC_hg19_v1_chr14_-_107131555 AK097017 AK128476 AK130433	13560	-	AY179836 AY179838 AY179841 AY179844 AY179846 AY179847 AY179848 AY179850 AY179854 AY179855 AY179856 AY179858 AY179860 AY003797 DQ454801 EF583677 EU099154 EU099192 AY003810 DQ454853 AY003779 DQ454620 DQ523910 GU552683 AY003802 AY003865 DQ454802 DQ454808 DQ454937 GU552691 GU552774 HM773974 FJ873961 EF441761 DQ454821 AY996332 FJ840044 FJ840053 FJ840143 FJ840193 FJ840194 FJ840196 FJ840204 FJ840239 FJ873866 FJ873869 FJ873895 FJ873936 FJ874043 GQ232929 HM116184 EF583683 EF175392 EU099153 GQ232967 GU358675 EF583681 EU099116 GU358674 JF810254 EF091907 EF175405 EU667599 EF091906 EF091908 EF091909 EF091910 EF175388 EF175390 EF175395 EF175406 EF175412 EF175417 EF175418 EF175420 EF175428 EF407848 EF441755 EU099106 EU350411 EU350412 EU433866 EU433872 EU433873 EU433879 EU667594 EU667595 EU667596 EU667597 EU667598 EU814958 EU814959 EU814960 EU814963 EU814966 FJ694873 FJ694874 GQ232838 GQ232965 GU358670 GU358676 GU358678 GU358682 JF810255 JF810274 AF103216 EF175425 EF583662 EF583663 EF583664 EF583665 EF583667 EF583673 EF583674 EF583675 EF583682 EU350410 M35478 EF407834 EF566907 EF407828 EF407830 EF583660 DQ100847 AY998726 AF209884 AJ007325 EF473862 EU099204 U86786 U86795 U86797 AF308545 AF308549 AF308553 AF308554 AF308559 AF308560 AF308561 EU090245 GQ903485 GQ903489 GQ903492 EU099120 GQ903503 AJ239384 EU099100 EU099208 Z80841 AF103052 AF103307 EU099086 EU099105 EU099142 EU099250 EU099176 EU099293 HM774304 AY515008 EU099141 EU099212 JN110763 JN110845 JN110914 JN111163 L04334 L04335 L04344 FJ385405 FJ385410 FJ385424 FJ385430 FJ385431 HM774065 HM774083 HM774091 HM774102 HM774365 HM774646 HM774653 HM774656 HM774681 HM774757 HM774769 HM774771 HM774786 HM774863 HM774965 HM775047 AF103339 AY515006 DQ523992 EU099090 EU099092 EU099115 EU099162 EU099179 EU099210 EU099218 EU099282 DQ097895 EF624069 EF624074 EF624075 EF624077 EF624128 EF624129 EF624130 EF624131 EF624138 EF624140 EF624141 EF624143 EF624174 EF624175 EF624176 EF624177 EF624179 EF624180 EF624182 EF624183 EF624184 EF624185 EF624186 EF624187 EF624188 EF624189 EF624190 EF624191 EF624192 EF624193 EU099060 EU099066 EU099128 EU099129 EU099145 EU099158 EU099160 EU099161 EU099165 EU099177 EU099178 EU099180 EU099247 EU146320 EU146330 EU146331 EU146336 EU146348 EU146349 EU146350 EU146351 EU146352 EU146353 EU146354 EU146355 EU146356 EU146357 EU146359 EU146383 EU146385 EU146386 M98324 AY393263 AY393515 DQ524120 EU090241 EU099081 EU099095 EU099099 EU099103 EU099111 EU099121 EU099135 EU099136 EU099164 EU099170 EU099174 EU099189 EU099205 EU099207 EU099209 EU099220 AF306353 AJ132852 AM259138 L12098 AF035025 AY392856 AY392858 AY393000 AY393010 AY393106 AY393123 AY393128 AY393133 AY393135 AY393137 AY393138 AY393233 AY393338 AY393342 AY393350 AY393373 AY393495 AY393496 AY393501 AY393503 AY393504 AY393508 AY393513 AY393514 AY393516 AY393517 AY393518 AY393519 AY393520 AY393522 AY393523 AY393525 AY393528 AY393532 AY393535 AY393538 AY393539 AY393540 AY393541 AY393542 AY393543 AY393544 AY393545 AY393546 AY393604 AY393611 AY393682 DQ100913 EU099069 EU099072 EU099083 EU099117 EU099138 EU099167 EU099168 EU099171 EU099175 EU099188 EU099198 EU099201 EU099202 EU099211 EU099219 EU099236 HM994945 AY574947 AY093586 AY093587 DQ100805 DQ100924 JN158773 AY093585 AF035785 AF098366 AY781822 DQ100688 DQ523989 HM995306 U00502 DQ100709 DQ100908 DQ523957 DQ524013 DQ524031 DQ524041 DQ524127 HM994992 HM994994 HM994997 HM994998 HM995013 HM995114 HM995174 HM995178 HM995180 HM995227 HM995241 HM995248 HM995283 HM995304 HM995307 HM995375 HM995447 HM995450 HM995512 HM995517 HM995520 HM995558 HM995678 HM995679 HM995680 HM995681 HM995682 HM995683 HM995684 HM995685 HM995744 HM996065 HM996269 HM996387 AF004321 AB063837 AB063906 AB063914 AB067012 AB067013 AB067018 AB067022 AB067235 AB363092 AF099200 AF174076 AY781868 AY866799 AY941859 DQ065663 DQ065677 DQ065701 DQ840709 DQ926327 EF178030 FJ195540 FJ385306 FJ385381 GQ856069 GQ903493 GQ903497 GQ903502 GQ903514 Z92894 AB027437 AB063666 AB063701 AB063715 AB063720 AB063763 AB063768 AB063778 AB063780 AB063785 AB063831 AB063902 AB063903 AB063921 AB066830 AB066835 AB066837 AB066840 AB066841 AB066842 AB066843 AB066928 AB066936 AB066939 AB066942 AB066944 AB066948 AB066949 AB066953 AB067158 AB067170 AB067305 AB067309 AB067333 AB067383 AB363078 AB363086 AB363094 AB363097 AB373608 AF021950 AF021951 AF021952 AF021970 AF021992 AF035784 AF062098 AF062127 AF062189 AF062216 AF062283 AF115114 AF115115 AF115116 AF115118 AF115119 AF174042 AF174065 AF174069 AF174073 AF174096 AF174109 AF174126 AF193848 AF217789 AF408721 AF460964 AF460965 AJ239346 AJ239357 AJ239365 AJ239372 AJ239376 AJ389170 AJ389172 AJ389179 AJ389181 AJ413995 AJ414000 AJ414001 AJ414002 AJ414004 AJ414008 AJ414009 AJ414010 AJ414015 AJ414017 AJ414020 AJ414021 AJ414023 AJ414027 AJ416562 AJ555258 AJ555262 AJ555275 AM040567 AY033246 AY055485 AY059634 AY281328 AY281329 AY466503 AY485361 AY553640 AY557623 AY557624 AY557625 AY557626 AY557627 AY561708 AY577304 AY781812 AY927666 AY941846 AY941940 D16837 DQ100681 DQ100723 DQ100733 DQ100777 DQ100808 DQ100811 DQ100820 DQ100839 DQ100902 DQ100906 DQ100912 DQ100952 DQ212523 DQ490739 DQ926531 EF555585 EF624068 EF624070 EF624071 EF624072 EF624073 EF624078 EF624079 EF624132 EF624136 EF624178 EF624181 EF624194 EF624195 EU202446 EU202448 EU835547 EU835554 FJ039781 FJ039784 FJ385379 GQ903484 GQ903486 GQ903487 GQ903490 GQ903491 GQ903495 GQ903496 GQ903498 GQ903500 GQ903501 GQ903504 GQ903507 GQ903509 GQ903511 GU570264 GU570271 GU570274 HM152493 HM152496 HM152502 HM152504 HM152527 HQ378401 HQ392874 HQ689778 HQ689781 JN158782 JN159449 JN159454 L14454 L23519 S73955 U00518 U00550 U00583 U71105 U85240 U89903 X64237 X67903 Z18841 Z34906 Z34908 Z34957 Z34959 Z34960 Z34961 Z34962 Z34963 AY927663 JN158517 DQ535261 DQ535284 DQ535416 DQ535445 DQ535451 DQ535460 EF177997 EF178006 EF178014 GU570268 Z35123 M18516 AF062105 AF062117 AF062156 AF062161 AF062175 AF062193 AF062198 AF062208 AF174026 AY172957 L06923 M62723 X65889 Z14214 Z47222 Z47224 Z47227 Z47233 Z47244 Z47245 Z47246 Z47247 Z47248 Z47249 Z47250 Z47251 Z47252 Z47253 Z47254 Z47255 Z47256 Z47257 Z47258 Z47259 Z47260 Z47261 Z47262 Z47263 Z47264 Z47265 Z47266 Z47267 Z47268 Z47269 Z47270 Z47271 Z47272 Z47273 Z80837 Z80853 CU688244 L23561 M24669 M24670 TSC_hg19_v1_chr14_-_107170387 BC062336	52406	-	BC073782|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF067420|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK097366|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC066594|IGH@|3492|immunoglobulin heavy locus##AK097365|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097362|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125079|IGH@|3492|immunoglobulin heavy locus##AK097017|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130433|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF035025|IGHV1-69|28461|immunoglobulin heavy variable 1-69##BC062336|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.312869	CTCF.p2:4:0.313
chr17	43717849	43717975	reg1027477.p1	5.400	+	TSC_hg19_v1_chr17_-_43568133 NM_014798	-149758	-	TSC_hg19_v1_chr17_-_43568118 AK299116 BC053848 AB002354 BC064361	-149810	-	TSC_hg19_v1_chr17_-_43510292 BC067345 NM_174919	-207625	-	TSC_hg19_v1_chr17_+_43861628 NM_001145146 NM_001145147 NM_001145148 NM_004382	143724	+	BC037967 HM852949 TSC_hg19_v1_chr17_+_43861685 X72304	143766	+	BC025401 NM_175882 BC022041	204344	+	NM_014798|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##AK299116|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC053848|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##AB002354|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC064361|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC067345|ARHGAP27|201176|Rho GTPase activating protein 27##NM_174919|ARHGAP27|201176|Rho GTPase activating protein 27##NM_001145146|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145147|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145148|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_004382|CRHR1|1394|corticotropin releasing hormone receptor 1##BC037967|CRHR1|1394|corticotropin releasing hormone receptor 1##X72304|CRHR1|1394|corticotropin releasing hormone receptor 1##BC025401|IMP5|162540|intramembrane protease 5##NM_175882|IMP5|162540|intramembrane protease 5##BC022041|IMP5|162540|intramembrane protease 5	0.996219	CTCF.p2:1:0.996
chr19	30156044	30156205	reg1023939.p2	5.400	+	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	-58935	+	NM_001146339	-138634	+	TSC_hg19_v1_chr19_-_29704107 NM_006003	-452003	-	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	225	+	TSC_hg19_v1_chr19_+_30156375 AK225814	297	+	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	49968	-	NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12	0.014931	
chr20	35402661	35402842	reg1025633.p1	5.400	+	TSC_hg19_v1_chr20_-_35402167 BC035821 AK093031 AX747868 AK290738 NM_001145316 NM_024918 AK301671 AK301840 BC058899 AK023408 BC026011 NM_001145315 NM_001145317 NM_001145318	-566	-	TSC_hg19_v1_chr20_-_35374542 NM_022477 NM_032013	-28199	-	TSC_hg19_v1_chr20_-_35374488 AK027665 AK295466 AB044943 AF251054 AK023618 AK295420	-28272	-	AK057056 TSC_hg19_v1_chr20_-_35407842	5025	-	TSC_hg19_v1_chr20_-_35444558 AK131491	41869	-	AK126630 NM_199181	85524	-	BC035821|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK093031|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK290738|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145316|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_024918|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301671|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301840|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC058899|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK023408|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC026011|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145315|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145317|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145318|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_022477|NDRG3|57446|NDRG family member 3##NM_032013|NDRG3|57446|NDRG family member 3##AK027665|NDRG3|57446|NDRG family member 3##AK295466|NDRG3|57446|NDRG family member 3##AB044943|NDRG3|57446|NDRG family member 3##AK023618|NDRG3|57446|NDRG family member 3##AK295420|NDRG3|57446|NDRG family member 3##AK057056|KIAA0889|140710|KIAA0889##AK131491|KIAA0889|140710|KIAA0889##AK126630|KIAA0889|140710|KIAA0889##NM_199181|KIAA0889|140710|KIAA0889	0.977273	CTCF.p2:44:0.977
chr5	72251710	72251869	reg1026963.p1	5.400	+	TSC_hg19_v1_chr5_+_72251813 BC137070 NM_001146032 NM_138782	-4	+	TSC_hg19_v1_chr5_+_72143999 U72395 U72069	-107782	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	-107848	+	TSC_hg19_v1_chr5_+_72251873 AK056770	82	+	TSC_hg19_v1_chr5_+_72251897 AK291782 BC006004 AK295141 BC014311 AL831971 AM393291 AM393840 CU676963	112	+	TSC_hg19_v1_chr5_+_72416401 NM_001161342 NM_173490 BC018083	164647	+	BC137070|FCHO2|115548|FCH domain only 2##NM_001146032|FCHO2|115548|FCH domain only 2##NM_138782|FCHO2|115548|FCH domain only 2##U72395|TNPO1|3842|transportin 1##U72069|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1##AK291782|FCHO2|115548|FCH domain only 2##BC006004|FCHO2|115548|FCH domain only 2##AK295141|FCHO2|115548|FCH domain only 2##BC014311|FCHO2|115548|FCH domain only 2##AL831971|FCHO2|115548|FCH domain only 2##AM393291|FCHO2|115548|FCH domain only 2##AM393840|FCHO2|115548|FCH domain only 2##NM_001161342|TMEM171|134285|transmembrane protein 171##NM_173490|TMEM171|134285|transmembrane protein 171##BC018083|TMEM171|134285|transmembrane protein 171	0.652017	CTCF.p2:-9:0.652
chr1	161762613	161762708	reg1021290.p1	5.399	+	TSC_hg19_v1_chr1_+_161736145 BC014969 BC071997 AB208929 CU677145	-26524	+	AF005887 AK290498 TSC_hg19_v1_chr1_+_161736109	-26550	+	NM_007348 TSC_hg19_v1_chr1_+_161736080 AB015856	-26590	+	AK316154 BC067274 NM_015441 TSC_hg19_v1_chr1_-_161993687	230976	-	TSC_hg19_v1_chr1_+_162039485 BC041382 AB007933 NM_001164757 NM_014697	276864	+	AY841899 NM_001126060	570112	+	BC014969|ATF6|22926|activating transcription factor 6##BC071997|ATF6|22926|activating transcription factor 6##AB208929|ATF6|22926|activating transcription factor 6##AF005887|ATF6|22926|activating transcription factor 6##AK290498|ATF6|22926|activating transcription factor 6##NM_007348|ATF6|22926|activating transcription factor 6##AB015856|ATF6|22926|activating transcription factor 6##AK316154|OLFML2B|25903|olfactomedin-like 2B##BC067274|OLFML2B|25903|olfactomedin-like 2B##NM_015441|OLFML2B|25903|olfactomedin-like 2B##BC041382|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AB007933|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_001164757|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_014697|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##AY841899|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein##NM_001126060|NOS1AP|9722|nitric oxide synthase 1 (neuronal) adaptor protein	0.444654	CTCF.p2:-21:0.445
chr1	212782075	212782163	reg1024509.p1	5.399	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	-12	+	NM_001040619 NM_001206484 NM_001206488 NM_001674 TSC_hg19_v1_chr1_+_212782102 AK294296	-84	+	NM_001030287	-43444	+	NM_001206486 AB066566 AB078026 AB078027 AB528347 AY313926 AY313927 BT006996 CR450334 DQ892723 DQ895972 AB209032	6288	+	AK301981 NM_153606 BC035007	15682	+	AB463432 HQ258061 TSC_hg19_v1_chr1_-_212873132	91001	-	AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3##NM_001040619|ATF3|467|activating transcription factor 3##NM_001206484|ATF3|467|activating transcription factor 3##NM_001206488|ATF3|467|activating transcription factor 3##NM_001674|ATF3|467|activating transcription factor 3##AK294296|ATF3|467|activating transcription factor 3##NM_001030287|ATF3|467|activating transcription factor 3##NM_001206486|ATF3|467|activating transcription factor 3##AB066566|ATF3|467|activating transcription factor 3##AB078026|ATF3|467|activating transcription factor 3##AB078027|ATF3|467|activating transcription factor 3##AY313926|ATF3|467|activating transcription factor 3##AY313927|ATF3|467|activating transcription factor 3##BT006996|ATF3|467|activating transcription factor 3##CR450334|ATF3|467|activating transcription factor 3##DQ892723|ATF3|467|activating transcription factor 3##DQ895972|ATF3|467|activating transcription factor 3##AB209032|ATF3|467|activating transcription factor 3##AK301981|FAM71A|149647|family with sequence similarity 71, member A##NM_153606|FAM71A|149647|family with sequence similarity 71, member A##BC035007|FAM71A|149647|family with sequence similarity 71, member A##HQ258061|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3	0.0	
chr16	4303310	4303491	reg1018568.p1	5.399	+	AL831973 AL832361 BX647476 AK056588 NM_001098814	-11334	-	AJ133123 NM_001116 TSC_hg19_v1_chr16_-_4166252	-137170	-	BC151207 AB011092 BC151229 TSC_hg19_v1_chr16_-_4166045	-137366	-	TSC_hg19_v1_chr16_-_4303791 AK094828	381	-	X57435 DQ893617 DQ895293 CR541726 CU679751 AB464303 TSC_hg19_v1_chr16_-_4322885 BC010576	19428	-	NM_003223 S73885 TSC_hg19_v1_chr16_-_4323025	19612	-	AL831973|SRL|6345|sarcalumenin##AL832361|SRL|6345|sarcalumenin##BX647476|SRL|6345|sarcalumenin##AK056588|SRL|6345|sarcalumenin##NM_001098814|SRL|6345|sarcalumenin##AJ133123|ADCY9|115|adenylate cyclase 9##NM_001116|ADCY9|115|adenylate cyclase 9##BC151207|ADCY9|115|adenylate cyclase 9##AB011092|ADCY9|115|adenylate cyclase 9##BC151229|ADCY9|115|adenylate cyclase 9##AK094828|LOC100507501|100507501|uncharacterized LOC100507501##X57435|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ893617|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ895293|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##CR541726|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##BC010576|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)	0.013147	
chr19	2595879	2596052	reg1022145.p2	5.399	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-119727	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-139005	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-139029	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	106730	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	106777	-	AK124445 TSC_hg19_v1_chr19_-_2717420	121384	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr4	323982	324115	reg1023049.p2	5.399	+	AK302099 NM_001137608	-34105	-	TSC_hg19_v1_chr4_+_124389 AK096662 AL833758 BC104026 BC104028	-199674	+	TSC_hg19_v1_chr4_+_53214 AK300505 AK311343 BC036110 BC043151 AK301848 AK309855 AK056302 BC020836 BC009008 BX537887 NM_182524	-270824	+	TSC_hg19_v1_chr4_+_331602 NM_003441	7547	+	TSC_hg19_v1_chr4_+_331608 BC036854 BC057244 L15309 BC074853	7622	+	BC098116 BC098259 BC098291 BC099730 TSC_hg19_v1_chr4_-_467940 BC040413 BC036795 BC060316 BC065035 AK024359 AK303674	143855	-	AK302099|ZNF732|654254|zinc finger protein 732##NM_001137608|ZNF732|654254|zinc finger protein 732##AK096662|ZNF718|255403|zinc finger protein 718##AL833758|ZNF718|255403|zinc finger protein 718##BC104026|ZNF718|255403|zinc finger protein 718##BC104028|ZNF718|255403|zinc finger protein 718##AK300505|ZNF595|152687|zinc finger protein 595##BC036110|ZNF595|152687|zinc finger protein 595##BC043151|ZNF595|152687|zinc finger protein 595##AK301848|ZNF595|152687|zinc finger protein 595##AK309855|ZNF595|152687|zinc finger protein 595##AK056302|ZNF595|152687|zinc finger protein 595##BC020836|ZNF718|255403|zinc finger protein 718##BX537887|ZNF595|152687|zinc finger protein 595##NM_182524|ZNF595|152687|zinc finger protein 595##NM_003441|ZNF141|7700|zinc finger protein 141##BC036854|ZNF141|7700|zinc finger protein 141##BC057244|ZNF141|7700|zinc finger protein 141##L15309|ZNF141|7700|zinc finger protein 141##BC074853|ZNF141|7700|zinc finger protein 141##BC098116|ABCA11P|79963|ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene##BC098259|ABCA11P|79963|ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene##BC098291|ABCA11P|79963|ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene##BC099730|ABCA11P|79963|ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene##BC040413|ABCA11P|79963|ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene##BC060316|ABCA11P|79963|ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene##AK024359|ABCA11P|79963|ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene##AK303674|ABCA11P|79963|ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene	0.119971	
chr8	55614286	55614397	reg1024894.p2	5.399	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	-85689	+	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	-243825	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-566530	+	BC106028 AY534241 NM_052898	400673	+	AF286340 NM_024831	1071404	+	AK308247 AK056932 NM_152417 BC020835 BC071636	1071556	-	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##AF286340|TGS1|96764|trimethylguanosine synthase 1##NM_024831|TGS1|96764|trimethylguanosine synthase 1##AK308247|TMEM68|137695|transmembrane protein 68##AK056932|TMEM68|137695|transmembrane protein 68##NM_152417|TMEM68|137695|transmembrane protein 68##BC020835|TMEM68|137695|transmembrane protein 68##BC071636|TMEM68|137695|transmembrane protein 68	0.963413	CTCF.p2:-4:0.963
chr11	615830	616009	reg1021513.p1	5.398	+	AF076494 NM_004031	-231	-	NM_020901 TSC_hg19_v1_chr11_+_576482 AB040975 BC146771 AK308541 BC136615 BC144293 BC144294 BC144295 BC112931	-39414	+	TSC_hg19_v1_chr11_-_575850 AK057794 AK123970	-40053	-	U53830 U53831 U53832 U73036 TSC_hg19_v1_chr11_-_615951 AK303752	17	-	NM_001572 NM_004029 TSC_hg19_v1_chr11_-_616001	82	-	AF276242 AF301909 TSC_hg19_v1_chr11_-_624945 AY358368 BC038405 AK000226 AK300991 AK308040 AK309157 AK000384 NM_001171968 NM_021924 NM_031264 AF258678 AF258679	9115	-	AF076494|IRF7|3665|interferon regulatory factor 7##NM_004031|IRF7|3665|interferon regulatory factor 7##NM_020901|PHRF1|57661|PHD and ring finger domains 1##AB040975|PHRF1|57661|PHD and ring finger domains 1##BC146771|PHRF1|57661|PHD and ring finger domains 1##AK308541|PHRF1|57661|PHD and ring finger domains 1##BC136615|PHRF1|57661|PHD and ring finger domains 1##BC144293|PHRF1|57661|PHD and ring finger domains 1##BC144294|PHRF1|57661|PHD and ring finger domains 1##BC144295|PHRF1|57661|PHD and ring finger domains 1##BC112931|PHRF1|57661|PHD and ring finger domains 1##AK057794|LOC143666|143666|uncharacterized LOC143666##AK123970|LOC143666|143666|uncharacterized LOC143666##U53830|IRF7|3665|interferon regulatory factor 7##U53831|IRF7|3665|interferon regulatory factor 7##U53832|IRF7|3665|interferon regulatory factor 7##U73036|IRF7|3665|interferon regulatory factor 7##AK303752|IRF7|3665|interferon regulatory factor 7##NM_001572|IRF7|3665|interferon regulatory factor 7##NM_004029|IRF7|3665|interferon regulatory factor 7##AF276242|CDHR5|53841|cadherin-related family member 5##AF301909|CDHR5|53841|cadherin-related family member 5##AY358368|CDHR5|53841|cadherin-related family member 5##BC038405|CDHR5|53841|cadherin-related family member 5##AK000226|CDHR5|53841|cadherin-related family member 5##AK300991|CDHR5|53841|cadherin-related family member 5##AK308040|CDHR5|53841|cadherin-related family member 5##AK309157|CDHR5|53841|cadherin-related family member 5##AK000384|CDHR5|53841|cadherin-related family member 5##NM_001171968|CDHR5|53841|cadherin-related family member 5##NM_021924|CDHR5|53841|cadherin-related family member 5##NM_031264|CDHR5|53841|cadherin-related family member 5##AF258678|CDHR5|53841|cadherin-related family member 5##AF258679|CDHR5|53841|cadherin-related family member 5	0.0	
chr1	184942801	184942972	reg1025285.p1	5.398	+	TSC_hg19_v1_chr1_-_184724031 NM_025191	-218855	-	AK023095 TSC_hg19_v1_chr1_-_184724001	-218882	-	AK225171 TSC_hg19_v1_chr1_-_184723985 AK315118	-218902	-	BC018532 AK022527 AY550972 TSC_hg19_v1_chr1_-_184943641 BC030531 AK310557 AK311019 AK127373 AB050477	703	-	TSC_hg19_v1_chr1_-_184943680 AF288391 NM_052966	803	-	TSC_hg19_v1_chr1_+_185014449 NM_007212 AF141327	71617	+	NM_025191|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK023095|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK225171|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK315118|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC018532|FAM129A|116496|family with sequence similarity 129, member A##AK022527|FAM129A|116496|family with sequence similarity 129, member A##AY550972|FAM129A|116496|family with sequence similarity 129, member A##BC030531|FAM129A|116496|family with sequence similarity 129, member A##AK310557|FAM129A|116496|family with sequence similarity 129, member A##AK311019|FAM129A|116496|family with sequence similarity 129, member A##AB050477|FAM129A|116496|family with sequence similarity 129, member A##AF288391|FAM129A|116496|family with sequence similarity 129, member A##NM_052966|FAM129A|116496|family with sequence similarity 129, member A##NM_007212|RNF2|6045|ring finger protein 2##AF141327|RNF2|6045|ring finger protein 2	0.0	
chr1	66911257	66911379	reg1026385.p1	5.398	+	TSC_hg19_v1_chr1_+_66798096 AK294441	-113223	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	-113465	+	AB209081 NM_001037340 AK290006	-452915	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	88566	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	306806	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	306847	+	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1	0.0	
chr18	24384518	24384628	reg1024950.p1	5.398	+	AF542549 NM_198991	-164266	-	AK289870 BC063652 TSC_hg19_v1_chr18_-_24129261 NM_001136205	-255332	-	NM_001142730 TSC_hg19_v1_chr18_-_24128518	-256063	-	U63623 NM_004028	57981	-	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	61143	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	338306	-	AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1##AK289870|KCTD1|284252|potassium channel tetramerisation domain containing 1##BC063652|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001136205|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1##U63623|AQP4|361|aquaporin 4##NM_004028|AQP4|361|aquaporin 4##AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	0.481893	CTCF.p2:4:0.482
chr6	40024720	40024813	reg1023610.p1	5.398	+	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-122552	-	AB527188 AJ224328 NM_005943	-129381	-	NM_015345 AL833083 BC128388	-263948	+	BC142616 AB033072 NM_020737 AK291474	530378	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	982183	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	985580	+	AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2	0.390935	CTCF.p2:6:0.391
chr6_ssto_hap7	2845334	2845461	reg1025054.p1	5.398	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.013387	
chrUn_gl000219	125379	125469	reg1022758.p2	5.398	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.803189	CTCF.p2:16:0.803
chr11	60115737	60115858	reg1029042.p1	5.397	+	BC101783 AF333758 AF354931 BC069322 NM_139249 GQ129453 GQ129454 AF354933 BC034588 AF354932	-13415	+	NM_001243266 NM_024021 NM_148975 AK292089 AK075081 TSC_hg19_v1_chr11_+_60048138 BC020648 CU676600 DQ891395 DQ894573 AB022821 AK314033 AB013102	-67704	+	AK291870 NM_001247999 NM_152852	-163659	-	AK075106 NM_021201 NM_206938 NM_206939 NM_206940 AK297027 TSC_hg19_v1_chr11_+_60146004 BC043485 AF309653 AK309884	30190	+	TSC_hg19_v1_chr11_+_60146063 BC020673 AF237916 AF201951 AF350501	30262	+	NM_001079692 NM_032597	47689	+	BC101783|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF333758|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354931|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC069322|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_139249|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129453|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129454|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354933|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC034588|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354932|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_001243266|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_024021|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_148975|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK292089|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK075081|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC020648|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ891395|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ894573|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB022821|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK314033|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB013102|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK291870|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001247999|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK075106|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_021201|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206938|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206939|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206940|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK297027|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF309653|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK309884|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##BC020673|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF237916|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF201951|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF350501|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_001079692|MS4A14|84689|membrane-spanning 4-domains, subfamily A, member 14##NM_032597|MS4A14|84689|membrane-spanning 4-domains, subfamily A, member 14	0.0	
chr16	20956310	20956403	reg1027496.p1	5.397	+	TSC_hg19_v1_chr16_+_20912407 BC017039	-43948	+	AK311415 NM_001128301 NM_001128302 TSC_hg19_v1_chr16_+_20912121 AK311881	-44235	+	BX648998 NM_173475 TSC_hg19_v1_chr16_-_20911681 BC040442 BX648185	-44706	-	NM_020422 TSC_hg19_v1_chr16_+_21169994 AK074667 AK293557 BC015812	213626	+	AF494040 NM_017539	214405	-	BC096304 BC096305 BC096306 BC096307 M90366 NM_003460 AK313003 AK293805 AK308820	266524	-	BC017039|LYRM1|57149|LYR motif containing 1##AK311415|LYRM1|57149|LYR motif containing 1##NM_001128301|LYRM1|57149|LYR motif containing 1##NM_001128302|LYRM1|57149|LYR motif containing 1##AK311881|LYRM1|57149|LYR motif containing 1##BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_020422|TMEM159|57146|transmembrane protein 159##AK074667|TMEM159|57146|transmembrane protein 159##AK293557|TMEM159|57146|transmembrane protein 159##BC015812|TMEM159|57146|transmembrane protein 159##AF494040|DNAH3|55567|dynein, axonemal, heavy chain 3##NM_017539|DNAH3|55567|dynein, axonemal, heavy chain 3##BC096304|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096305|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096306|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096307|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##M90366|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##NM_003460|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK313003|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK293805|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK308820|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)	0.679719	CTCF.p2:6:0.680
chr19	17180188	17180278	reg1028540.p1	5.397	+	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-42693	-	AK075099 TSC_hg19_v1_chr19_-_17014494	-165780	-	AK092632 TSC_hg19_v1_chr19_-_17007756 AK124052	-172485	-	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	6088	-	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	6360	+	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	145939	+	AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK075099|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK092632|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK124052|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)	0.344556	CTCF.p2:-1:0.345
chr3	146312794	146312909	reg1028552.p1	5.397	+	TSC_hg19_v1_chr3_-_146262505 AF098642 AB006746 NM_021105	-50327	-	TSC_hg19_v1_chr3_-_146262343 BC021100 BC032718 BC017901 AK313377 AK300181	-50482	-	TSC_hg19_v1_chr3_-_146262279 BC070251	-50559	-	BC157886 BC171917 TSC_hg19_v1_chr3_-_146323105	10216	-	AY436642 NM_001085420	11151	-	BC041954 TSC_hg19_v1_chr3_+_147111244	798381	+	AF098642|PLSCR1|5359|phospholipid scramblase 1##AB006746|PLSCR1|5359|phospholipid scramblase 1##NM_021105|PLSCR1|5359|phospholipid scramblase 1##BC021100|PLSCR1|5359|phospholipid scramblase 1##BC032718|PLSCR1|5359|phospholipid scramblase 1##BC017901|PLSCR1|5359|phospholipid scramblase 1##AK313377|PLSCR1|5359|phospholipid scramblase 1##AK300181|PLSCR1|5359|phospholipid scramblase 1##BC070251|PLSCR1|5359|phospholipid scramblase 1##BC157886|PLSCR5|389158|phospholipid scramblase family, member 5##BC171917|PLSCR5|389158|phospholipid scramblase family, member 5##AY436642|PLSCR5|389158|phospholipid scramblase family, member 5##NM_001085420|PLSCR5|389158|phospholipid scramblase family, member 5	0.952892	CTCF.p2:-6:0.953
chr1	231942538	231942650	reg1027063.p1	5.396	+	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	-180039	+	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	-278163	+	AF229245 NM_022051	-381805	-	BC006013 NM_020808 AY168879	708675	-	TSC_hg19_v1_chr1_-_232878472 AK093200	935863	-	NM_019090 BC109122	998110	+	AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1##FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)##NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)##BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_019090|KIAA1383|54627|KIAA1383##BC109122|KIAA1383|54627|KIAA1383	0.037423	
chr2	161126654	161126769	reg1025170.p2	5.396	+	AK304203 AL831998 TSC_hg19_v1_chr2_-_161056784 AK290300 AK313944	-69916	-	AB463075 AM393800 M35198 NM_000888 BC121178 BC143656	-70124	-	U17033 U17034 NM_001007267 NM_001195641 NM_007366 TSC_hg19_v1_chr2_-_160919148	-207576	-	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	3478	-	CU676342 D28482 X77494 AK225887 L11289 TSC_hg19_v1_chr2_-_161350025 AK309949 BC012992 BC012993 AK297812	223248	-	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	223606	-	AK304203|ITGB6|3694|integrin, beta 6##AL831998|ITGB6|3694|integrin, beta 6##AK290300|ITGB6|3694|integrin, beta 6##AK313944|ITGB6|3694|integrin, beta 6##AM393800|ITGB6|3694|integrin, beta 6##M35198|ITGB6|3694|integrin, beta 6##NM_000888|ITGB6|3694|integrin, beta 6##BC121178|ITGB6|3694|integrin, beta 6##BC143656|ITGB6|3694|integrin, beta 6##U17033|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##U17034|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001007267|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001195641|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_007366|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	0.028997	
chr2	12044363	12044489	reg1027356.p1	5.395	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-157651	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-234135	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-361583	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	812827	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	813490	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	813971	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.246918	CTCF.p2:12:0.247
chr4	174209565	174209740	reg1024780.p1	5.395	+	BC040577 TSC_hg19_v1_chr4_-_174090813	-118845	-	BC043556 TSC_hg19_v1_chr4_-_174090314	-119342	-	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	-119700	+	Z17240 BT019782 BT019783 AB463732 DQ892288 DQ895487 NM_001130689 TSC_hg19_v1_chr4_-_174255014	45223	-	BC001063 BC100019 BC021054 TSC_hg19_v1_chr4_-_174255505 BC000903 AK311864 NM_001130688 NM_002129	45877	-	TSC_hg19_v1_chr4_+_174292088 NM_003864 AF055993	82411	+	NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##Z17240|HMGB2|3148|high mobility group box 2##BT019782|HMGB2|3148|high mobility group box 2##BT019783|HMGB2|3148|high mobility group box 2##DQ892288|HMGB2|3148|high mobility group box 2##DQ895487|HMGB2|3148|high mobility group box 2##NM_001130689|HMGB2|3148|high mobility group box 2##BC001063|HMGB2|3148|high mobility group box 2##BC100019|HMGB2|3148|high mobility group box 2##BC000903|HMGB2|3148|high mobility group box 2##AK311864|HMGB2|3148|high mobility group box 2##NM_001130688|HMGB2|3148|high mobility group box 2##NM_002129|HMGB2|3148|high mobility group box 2##NM_003864|SAP30|8819|Sin3A-associated protein, 30kDa##AF055993|SAP30|8819|Sin3A-associated protein, 30kDa	0.985301	CTCF.p2:-9:0.985
chr7	97651100	97651281	reg1001156.p2	5.395	+	TSC_hg19_v1_chr7_-_97619350 AB528806 NM_006188	-31808	-	TSC_hg19_v1_chr7_-_97601657 BC030024	-49530	-	BC062733 TSC_hg19_v1_chr7_-_97601645 BC029615	-49547	-	TSC_hg19_v1_chr7_+_97736173 AB029002 BC146773 NM_014916 BC131504 AB384558 AB590084 AY130988	85146	+	BC113394 BC113396 NM_177455 AB464465	190401	+	TSC_hg19_v1_chr7_-_97881512 AK292996 BC053591 NM_015395 AK057048	230309	-	NM_006188|OCM2|4951|oncomodulin 2##BC062733|MGC72080|389538|MGC72080 pseudogene##BC029615|MGC72080|389538|MGC72080 pseudogene##AB029002|LMTK2|22853|lemur tyrosine kinase 2##BC146773|LMTK2|22853|lemur tyrosine kinase 2##NM_014916|LMTK2|22853|lemur tyrosine kinase 2##BC131504|LMTK2|22853|lemur tyrosine kinase 2##AY130988|LMTK2|22853|lemur tyrosine kinase 2##BC113394|BHLHA15|168620|basic helix-loop-helix family, member a15##BC113396|BHLHA15|168620|basic helix-loop-helix family, member a15##NM_177455|BHLHA15|168620|basic helix-loop-helix family, member a15##AK292996|TECPR1|25851|tectonin beta-propeller repeat containing 1##BC053591|TECPR1|25851|tectonin beta-propeller repeat containing 1##NM_015395|TECPR1|25851|tectonin beta-propeller repeat containing 1##AK057048|TECPR1|25851|tectonin beta-propeller repeat containing 1	0.0	
chr10	66190631	66190778	reg1027832.p2	5.394	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-909463	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-909542	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-909589	+	NM_178011 BX640611 AY358315 BC111492	2495111	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	3234692	-	AF091606 AK313882 NM_013266	3265233	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.010533	
chr1	234908666	234908778	reg1018811.p2	5.394	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-12948	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-163476	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-164864	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	383367	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	383509	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	415841	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr3	79027333	79027445	reg1024103.p2	5.394	+	TSC_hg19_v1_chr3_-_78666943 AK025535	-360404	-	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-1938109	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-3192687	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	41198	-	NM_002941	789669	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	2783308	-	AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK123776|ZNF717|100131827|zinc finger protein 717##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.998688	CTCF.p2:-14:0.999
chrX	93313905	93314021	reg1029178.p1	5.394	+	NM_001171109 NM_001171110 NM_001171111 NM_173698	-384952	+	AK090772 D50370 TSC_hg19_v1_chrX_-_92928576 BC034954 AK315176 AK223621 BC094729 AK095682 NM_004538	-385340	-	AJ564931 NM_001168360 NM_001168361 NM_001168362 NM_001168363 AF206516 AF217288 AY861432 AY861433 AY861434 AY861435	-2223482	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	2625788	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	2625991	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	2825007	+	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A##NM_001171110|FAM133A|286499|family with sequence similarity 133, member A##NM_001171111|FAM133A|286499|family with sequence similarity 133, member A##NM_173698|FAM133A|286499|family with sequence similarity 133, member A##AK090772|NAP1L3|4675|nucleosome assembly protein 1-like 3##D50370|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC034954|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK315176|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK223621|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC094729|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK095682|NAP1L3|4675|nucleosome assembly protein 1-like 3##NM_004538|NAP1L3|4675|nucleosome assembly protein 1-like 3##AJ564931|PCDH11X|27328|protocadherin 11 X-linked##NM_001168360|PCDH11X|27328|protocadherin 11 X-linked##NM_001168361|PCDH11X|27328|protocadherin 11 X-linked##NM_001168362|PCDH11X|27328|protocadherin 11 X-linked##NM_001168363|PCDH11X|27328|protocadherin 11 X-linked##AF206516|PCDH11X|27328|protocadherin 11 X-linked##AF217288|PCDH11X|27328|protocadherin 11 X-linked##AY861432|PCDH11X|27328|protocadherin 11 X-linked##AY861433|PCDH11X|27328|protocadherin 11 X-linked##AY861434|PCDH11X|27328|protocadherin 11 X-linked##AY861435|PCDH11X|27328|protocadherin 11 X-linked##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa	0.963438	CTCF.p2:3:0.963
chr10	112257337	112257469	reg1026351.p2	5.393	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-192703	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-192810	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-271582	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	348	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	70089	+	AF067163 TSC_hg19_v1_chr10_+_112344155	86712	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.0	
chr10	114325338	114325463	reg1027228.p1	5.393	+	TSC_hg19_v1_chr10_-_114207307 AK308026	-118095	-	TSC_hg19_v1_chr10_+_114206991 BC017052 AK303646	-118389	+	TSC_hg19_v1_chr10_+_114206756 AK095476 NM_145206 BC064614	-118636	+	TSC_hg19_v1_chr10_+_114710005 AK225809 NM_001146274 NM_001146283 NM_001146284 NM_001146285 NM_001146286 NM_001198525 NM_001198526 NM_001198527 NM_001198528 NM_001198529 NM_001198530 NM_001198531 NM_030756 FJ010174 Y11306 AK315243 FJ010168 FJ010169 FJ010172 FJ010166 FJ010167 FJ010170 BC032656 FJ010171 AK299295 AB440195 AB451266 CR536574 HM352838 HM352839 HM352840 HM352841 HM352842 HM352843 HM352844 HM352845 HM352846 HM352847 HM352848 HM352849 HM352850 HM352851 BX648364	384902	+	TSC_hg19_v1_chr10_+_114710785 FJ010164 FJ010165 FJ010173	385433	+	AK303948 NM_001177660	985189	+	AK308026|ZDHHC6|64429|zinc finger, DHHC-type containing 6##BC017052|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##AK303646|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##NM_145206|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010164|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010165|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010173|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK303948|HABP2|3026|hyaluronan binding protein 2##NM_001177660|HABP2|3026|hyaluronan binding protein 2	0.0	
chr14	86523509	86523638	reg1025020.p1	5.393	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-523988	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-527032	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-527100	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	1935890	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	1935986	-	NM_001201402	1936435	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	0.160093	
chr16	89008504	89008684	reg1006833.p2	5.393	+	AB010420 NM_175931	-988	-	AB528852 EU190484 BC130001 BC130002 NM_001080487	-75553	-	TSC_hg19_v1_chr16_+_88923536 NM_016209 AF089106 AX771012 AK311885 BC105809 AK126779 AF161524 AK310805 AX771013 BC018024 AX771014 BC011369	-85071	+	AB527670 EU446890 BC047019 AK314766 AB010419 BC062624 NM_005187 TSC_hg19_v1_chr16_-_89043569	34809	-	TSC_hg19_v1_chr16_-_89119364 AK055272	110775	-	NM_001127214 NM_001243279 NM_174917 TSC_hg19_v1_chr16_+_89160259	151643	+	AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##EU190484|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130001|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130002|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001080487|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_016209|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF089106|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771012|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK311885|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC105809|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK126779|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF161524|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK310805|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771013|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC018024|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771014|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC011369|TRAPPC2L|51693|trafficking protein particle complex 2-like##EU446890|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC047019|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AK314766|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010419|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC062624|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_005187|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_001127214|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001243279|ACSF3|197322|acyl-CoA synthetase family member 3##NM_174917|ACSF3|197322|acyl-CoA synthetase family member 3	0.0	
chr1	77882907	77882974	reg1031331.p2	5.393	+	AY171600 BC033896 NM_012093	-134654	+	TSC_hg19_v1_chr1_+_77747727 BC036666 AK090967 AX746708	-135206	+	TSC_hg19_v1_chr1_+_77747603 AF445193 NM_174858	-135309	+	TSC_hg19_v1_chr1_-_78148354 BX641096 BX641096 AK310514 BX641001 BX641001 NM_015534	265415	-	TSC_hg19_v1_chr1_-_78149099 BC035079 BC035079	266258	-	TSC_hg19_v1_chr1_-_78225538 BC016663 AK308402 AB029020 AF383172 AF383173 AK022864 NM_015017 NM_201624 NM_201626	342512	-	AY171600|AK5|26289|adenylate kinase 5##BC033896|AK5|26289|adenylate kinase 5##NM_012093|AK5|26289|adenylate kinase 5##BC036666|AK5|26289|adenylate kinase 5##AK090967|AK5|26289|adenylate kinase 5##AF445193|AK5|26289|adenylate kinase 5##NM_174858|AK5|26289|adenylate kinase 5##BX641096|ZZZ3|26009|zinc finger, ZZ-type containing 3##BX641096|ZZZ3|26009|zinc finger, ZZ-type containing 3##AK310514|ZZZ3|26009|zinc finger, ZZ-type containing 3##BX641001|ZZZ3|26009|zinc finger, ZZ-type containing 3##BX641001|ZZZ3|26009|zinc finger, ZZ-type containing 3##NM_015534|ZZZ3|26009|zinc finger, ZZ-type containing 3##BC035079|ZZZ3|26009|zinc finger, ZZ-type containing 3##BC035079|ZZZ3|26009|zinc finger, ZZ-type containing 3##BC016663|USP33|23032|ubiquitin specific peptidase 33##AK308402|USP33|23032|ubiquitin specific peptidase 33##AB029020|USP33|23032|ubiquitin specific peptidase 33##AF383172|USP33|23032|ubiquitin specific peptidase 33##AF383173|USP33|23032|ubiquitin specific peptidase 33##AK022864|USP33|23032|ubiquitin specific peptidase 33##NM_015017|USP33|23032|ubiquitin specific peptidase 33##NM_201624|USP33|23032|ubiquitin specific peptidase 33##NM_201626|USP33|23032|ubiquitin specific peptidase 33	0.672835	CTCF.p2:2:0.673
chr2	102972466	102972647	reg1009352.p2	5.393	+	BC012580 BC030975 NM_003856 AK291578 AB029084	-18825	+	AB012701 NM_016232 AK313967 AK303389	-44565	+	AF284434 NM_003854 U49065 BC107064	-169108	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	6552	+	AK300026 AF077346 NM_003853	62644	+	CR627411 NM_001011552	117205	+	BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##AB012701|IL1RL1|9173|interleukin 1 receptor-like 1##NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1##AK313967|IL18R1|8809|interleukin 18 receptor 1##AK303389|IL1RL1|9173|interleukin 1 receptor-like 1##AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1##AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein##AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein##NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein##CR627411|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##NM_001011552|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4	0.0	
chr2	84858359	84858455	reg1023095.p1	5.393	+	TSC_hg19_v1_chr2_+_84743576 AK094676 NM_001370	-114830	+	NM_003849	-171822	-	AK296741 TSC_hg19_v1_chr2_-_84686396	-172012	-	TSC_hg19_v1_chr2_-_85108209 AK296608 AK309615	249800	-	TSC_hg19_v1_chr2_-_85108241 NM_001080824 BC051789	249896	-	NM_021103 AK130949 D28363 TSC_hg19_v1_chr2_+_85132779 AK311952 BC016731 BC107889 S54005 BC016025 M20259 AY453400	274388	+	AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296608|C2orf89|129293|chromosome 2 open reading frame 89##AK309615|C2orf89|129293|chromosome 2 open reading frame 89##NM_001080824|C2orf89|129293|chromosome 2 open reading frame 89##BC051789|C2orf89|129293|chromosome 2 open reading frame 89##NM_021103|TMSB10|9168|thymosin beta 10##AK130949|TMSB10|9168|thymosin beta 10##AK311952|TMSB10|9168|thymosin beta 10##BC016731|TMSB10|9168|thymosin beta 10##BC107889|TMSB10|9168|thymosin beta 10##S54005|TMSB10|9168|thymosin beta 10##BC016025|TMSB10|9168|thymosin beta 10##M20259|TMSB10|9168|thymosin beta 10##AY453400|TMSB10|9168|thymosin beta 10	0.021916	
chr4	12681003	12681116	reg1026627.p1	5.393	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-1250527	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-1994658	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-2222049	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	804892	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	804916	-	AB463932 AF009801 EU446467 BC111966 NM_001189	865016	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.959707	CTCF.p2:-10:0.960
chr4	48683993	48684126	reg1023664.p1	5.393	+	TSC_hg19_v1_chr4_+_48492278 BC136265 AY191416 NM_175619	-191778	+	TSC_hg19_v1_chr4_+_48485353 AK126542 NM_152679 BC019066 BC012048 DQ892628 EU176704 AY704414	-198632	+	TSC_hg19_v1_chr4_+_48343571 BC006139 BC007701 BC012067 NM_020846 AB040891	-340446	+	TSC_hg19_v1_chr4_-_48782266 AL833444	98210	-	TSC_hg19_v1_chr4_-_48782286 BC040987 BC050336 NM_015030	98239	-	TSC_hg19_v1_chr4_+_48833104 NM_001079840 NM_001079841 NM_017830 AK297864 AF323665 AF324350 AK000462 BC003409 NM_001079839 NM_001079842 NM_001168254 BC088361	149192	+	BC136265|ZAR1|326340|zygote arrest 1##AY191416|ZAR1|326340|zygote arrest 1##NM_175619|ZAR1|326340|zygote arrest 1##AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC006139|SLAIN2|57606|SLAIN motif family, member 2##BC007701|SLAIN2|57606|SLAIN motif family, member 2##BC012067|SLAIN2|57606|SLAIN motif family, member 2##NM_020846|SLAIN2|57606|SLAIN motif family, member 2##AB040891|SLAIN2|57606|SLAIN motif family, member 2##AL833444|FRYL|285527|FRY-like##BC040987|FRYL|285527|FRY-like##BC050336|FRYL|285527|FRY-like##NM_015030|FRYL|285527|FRY-like##NM_001079840|OCIAD1|54940|OCIA domain containing 1##NM_001079841|OCIAD1|54940|OCIA domain containing 1##NM_017830|OCIAD1|54940|OCIA domain containing 1##AK297864|OCIAD1|54940|OCIA domain containing 1##AF323665|OCIAD1|54940|OCIA domain containing 1##AF324350|OCIAD1|54940|OCIA domain containing 1##AK000462|OCIAD1|54940|OCIA domain containing 1##BC003409|OCIAD1|54940|OCIA domain containing 1##NM_001079839|OCIAD1|54940|OCIA domain containing 1##NM_001079842|OCIAD1|54940|OCIA domain containing 1##NM_001168254|OCIAD1|54940|OCIA domain containing 1##BC088361|OCIAD1|54940|OCIA domain containing 1	0.831815	CTCF.p2:-20:0.832
chr7	123341701	123341820	reg1026031.p1	5.393	+	NM_207163 AK299434 AK299389 AK300698 AK309449 BC017911 BC062765 AK309496 AB591033	-45823	+	AF428257 BC100874 BC100875 BC100876 BC100877 NM_080928	-92667	+	CR933664 BT006695 TSC_hg19_v1_chr7_-_123197862 AK022209 BC020821 BC070236 BC070237 U64028 AK315458 U53468 BC000813 NM_005000	-143870	-	TSC_hg19_v1_chr7_-_123389069 AM295156 CU690940 AB587496 BC013776 AK289795 D88460 CR749438 BC028602 BC052955 NM_003941	47214	-	AF009010 NM_012269	143462	+	NM_001174044 NM_003117 NM_153189 AY920278 AY920279 S67798 BC026163	223566	+	NM_207163|LMOD2|442721|leiomodin 2 (cardiac)##AK299434|LMOD2|442721|leiomodin 2 (cardiac)##AK299389|LMOD2|442721|leiomodin 2 (cardiac)##AK300698|LMOD2|442721|leiomodin 2 (cardiac)##BC017911|LMOD2|442721|leiomodin 2 (cardiac)##BC062765|LMOD2|442721|leiomodin 2 (cardiac)##AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15##NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15##CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AM295156|WASL|8976|Wiskott-Aldrich syndrome-like##BC013776|WASL|8976|Wiskott-Aldrich syndrome-like##AK289795|WASL|8976|Wiskott-Aldrich syndrome-like##D88460|WASL|8976|Wiskott-Aldrich syndrome-like##CR749438|WASL|8976|Wiskott-Aldrich syndrome-like##BC028602|WASL|8976|Wiskott-Aldrich syndrome-like##BC052955|WASL|8976|Wiskott-Aldrich syndrome-like##NM_003941|WASL|8976|Wiskott-Aldrich syndrome-like##AF009010|HYAL4|23553|hyaluronoglucosaminidase 4##NM_012269|HYAL4|23553|hyaluronoglucosaminidase 4##NM_001174044|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_003117|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_153189|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920278|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920279|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##S67798|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##BC026163|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)	0.998903	CTCF.p2:-2:0.999
chr8	20400554	20400671	reg1027111.p1	5.393	+	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	-287866	-	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	-345690	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	-345719	+	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	1245180	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	1245754	-	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	1370553	-	AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa	1.163484	CTCF.p2:-2:0.998
chr9	88515556	88515665	reg1024818.p1	5.393	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	-158739	-	U12140 TSC_hg19_v1_chr9_+_87285349	-1230278	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-1230858	+	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	40464	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	40568	+	TSC_hg19_v1_chr9_-_88714445 AY358593 BC001740 AK075542 AF236056	198815	-	AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AY358593|GOLM1|51280|golgi membrane protein 1##BC001740|GOLM1|51280|golgi membrane protein 1##AK075542|GOLM1|51280|golgi membrane protein 1##AF236056|GOLM1|51280|golgi membrane protein 1	0.0	
chr1	214811211	214811321	reg1025116.p1	5.392	+	TSC_hg19_v1_chr1_+_214776585 U30872	-34648	+	TSC_hg19_v1_chr1_+_214776547 NM_016343 U19769 AK307690	-34745	+	TSC_hg19_v1_chr1_-_214724977 NM_005401	-86268	-	NM_001017424	367618	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	445344	+	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	929597	+	U30872|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##NM_016343|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##U19769|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##AK307690|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##NM_005401|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3	0.984465	CTCF.p2:10:0.984
chr17	61943584	61943729	reg1027987.p2	5.392	+	TSC_hg19_v1_chr17_-_61920365 BC136322 NM_001098426 U66618	-23306	-	TSC_hg19_v1_chr17_-_61920289 BC142963	-23369	-	TSC_hg19_v1_chr17_-_61920046 AK300939	-23575	-	V00573 BC119748 BC022044 BC035965 NM_020991 NM_022644 NM_022645	7386	-	AB451332 AB451477 AF006061 AF006060 M38451 BC020760 J03756 NM_002059 NM_022556 NM_022557 NM_022558 AK312194	15535	-	BT006926 J00118 BC002717 AK291587 BC005921 BC057768 BC062775 BC020756 NM_001317 M35419	30295	-	BC136322|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##NM_001098426|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##U66618|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##BC142963|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##AK300939|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##V00573|CSH2|1443|chorionic somatomammotropin hormone 2##BC119748|CSH2|1443|chorionic somatomammotropin hormone 2##BC022044|CSH2|1443|chorionic somatomammotropin hormone 2##BC035965|CSH2|1443|chorionic somatomammotropin hormone 2##NM_020991|CSH2|1443|chorionic somatomammotropin hormone 2##NM_022644|CSH2|1443|chorionic somatomammotropin hormone 2##NM_022645|CSH2|1443|chorionic somatomammotropin hormone 2##AB451332|GH2|2689|growth hormone 2##AB451477|GH2|2689|growth hormone 2##AF006061|GH2|2689|growth hormone 2##AF006060|GH2|2689|growth hormone 2##M38451|GH2|2689|growth hormone 2##BC020760|GH2|2689|growth hormone 2##J03756|GH2|2689|growth hormone 2##NM_002059|GH2|2689|growth hormone 2##NM_022556|GH2|2689|growth hormone 2##NM_022557|GH2|2689|growth hormone 2##NM_022558|GH2|2689|growth hormone 2##AK312194|GH2|2689|growth hormone 2##BT006926|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##J00118|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC002717|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##AK291587|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC005921|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC057768|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC062775|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC020756|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##NM_001317|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)	0.991911	CTCF.p2:-19:0.992
chr19	14685243	14685399	reg1001983.p2	5.392	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	-2472	-	TSC_hg19_v1_chr19_+_14640435 AK001416 AK315412 BC007801 BC013881 BC005952 AF038958 BC002425 BC034484 AF222742 AX771269 AF038959 AB529027 DQ891949 DQ895135 EU832830 GQ129437	-44862	+	AK094087 TSC_hg19_v1_chr19_+_14640406	-44915	+	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	8593	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	100356	-	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	115443	+	CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AK001416|TECR|9524|trans-2,3-enoyl-CoA reductase##AK315412|TECR|9524|trans-2,3-enoyl-CoA reductase##BC007801|TECR|9524|trans-2,3-enoyl-CoA reductase##BC013881|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005952|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038958|TECR|9524|trans-2,3-enoyl-CoA reductase##BC002425|TECR|9524|trans-2,3-enoyl-CoA reductase##BC034484|TECR|9524|trans-2,3-enoyl-CoA reductase##AF222742|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038959|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ891949|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ895135|TECR|9524|trans-2,3-enoyl-CoA reductase##EU832830|TECR|9524|trans-2,3-enoyl-CoA reductase##GQ129437|TECR|9524|trans-2,3-enoyl-CoA reductase##AK094087|TECR|9524|trans-2,3-enoyl-CoA reductase##NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333	0.0	
chr2	192543655	192543757	reg1028154.p4	5.392	+	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	-844	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-433608	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-527399	-	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	168032	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	168265	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	515608	-	NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2	0.0	
chrX	17139732	17139830	reg1027508.p1	5.392	+	TSC_hg19_v1_chrX_+_16964847 AF010233 NM_001080975 NM_004726 AF511533 AF512951	-174849	+	TSC_hg19_v1_chrX_-_16888462 NM_002893	-251284	-	TSC_hg19_v1_chrX_-_16888456 X72841	-251330	-	TSC_hg19_v1_chrX_+_17393357 AK302437	253573	+	TSC_hg19_v1_chrX_+_17393541 AY436752 NM_198270	253761	+	TSC_hg19_v1_chrX_+_17393806 BC136415 BC171763	254030	+	AF010233|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_001080975|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_004726|REPS2|9185|RALBP1 associated Eps domain containing 2##AF511533|REPS2|9185|RALBP1 associated Eps domain containing 2##AF512951|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_002893|RBBP7|5931|retinoblastoma binding protein 7##X72841|RBBP7|5931|retinoblastoma binding protein 7##AK302437|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AY436752|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_198270|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC136415|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC171763|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	0.988844	CTCF.p2:8:0.989
chr1	110448938	110449089	reg1023496.p2	5.391	+	AY074930 TSC_hg19_v1_chr1_-_110306546 AK307932 AK310979 AK308196 AK025175 AK225235 BC012926 AK292198 AK290261 NM_024526 NM_133181 NM_139053	-142429	-	BC008790 NM_000849	-165354	-	BT019945 CR542108 AB527634 DQ891834 EU176637 BC000088 EF363096 J05459 AB209816 AK313444 TSC_hg19_v1_chr1_-_110282939 AK304300	-166085	-	NM_000757 NM_172210 NM_172212	4219	+	BC021117 TSC_hg19_v1_chr1_+_110453470 AK291660 M37435 M27087 U22386 AB527768 M64592	4537	+	AF315687 TSC_hg19_v1_chr1_+_110527316	78298	+	AY074930|EPS8L3|79574|EPS8-like 3##AK307932|EPS8L3|79574|EPS8-like 3##AK310979|EPS8L3|79574|EPS8-like 3##AK308196|EPS8L3|79574|EPS8-like 3##AK025175|EPS8L3|79574|EPS8-like 3##AK225235|EPS8L3|79574|EPS8-like 3##BC012926|EPS8L3|79574|EPS8-like 3##AK292198|EPS8L3|79574|EPS8-like 3##AK290261|EPS8L3|79574|EPS8-like 3##NM_024526|EPS8L3|79574|EPS8-like 3##NM_133181|EPS8L3|79574|EPS8-like 3##NM_139053|EPS8L3|79574|EPS8-like 3##BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)##NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)##BT019945|GSTM3|2947|glutathione S-transferase mu 3 (brain)##CR542108|GSTM3|2947|glutathione S-transferase mu 3 (brain)##DQ891834|GSTM3|2947|glutathione S-transferase mu 3 (brain)##EU176637|GSTM3|2947|glutathione S-transferase mu 3 (brain)##BC000088|GSTM3|2947|glutathione S-transferase mu 3 (brain)##EF363096|GSTM3|2947|glutathione S-transferase mu 3 (brain)##J05459|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AB209816|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AK313444|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AK304300|GSTM3|2947|glutathione S-transferase mu 3 (brain)##NM_000757|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172210|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172212|CSF1|1435|colony stimulating factor 1 (macrophage)##BC021117|CSF1|1435|colony stimulating factor 1 (macrophage)##AK291660|CSF1|1435|colony stimulating factor 1 (macrophage)##M37435|CSF1|1435|colony stimulating factor 1 (macrophage)##M27087|CSF1|1435|colony stimulating factor 1 (macrophage)##U22386|CSF1|1435|colony stimulating factor 1 (macrophage)##M64592|CSF1|1435|colony stimulating factor 1 (macrophage)##AF315687|AHCYL1|10768|adenosylhomocysteinase-like 1	0.0	
chr12	54415543	54415670	reg1027083.p1	5.391	+	BC034922 BC044635 M16938 TSC_hg19_v1_chr12_+_54410917 AK314829	-4682	+	NM_014620 NM_153693 TSC_hg19_v1_chr12_+_54410671 X07495	-4929	+	TSC_hg19_v1_chr12_+_54402796 BC053898 NM_022658 AK290959	-12760	+	NM_004503 S82986 BC074844 BC074845 AB587587 CR456954	6643	+	NM_018953 AB463752	11260	+	BC050442 NM_153633 AB464580 CU690682 EU446482	32077	+	BC034922|HOXC5|3222|homeobox C5##BC044635|HOXC5|3222|homeobox C5##M16938|HOXC6|3223|homeobox C6##AK314829|HOXC6|3223|homeobox C6##NM_014620|HOXC4|3221|homeobox C4##NM_153693|HOXC6|3223|homeobox C6##X07495|HOXC4|3221|homeobox C4##BC053898|HOXC8|3224|homeobox C8##NM_022658|HOXC8|3224|homeobox C8##AK290959|HOXC8|3224|homeobox C8##NM_004503|HOXC6|3223|homeobox C6##S82986|HOXC6|3223|homeobox C6##BC074844|HOXC6|3223|homeobox C6##BC074845|HOXC6|3223|homeobox C6##CR456954|HOXC6|3223|homeobox C6##NM_018953|HOXC5|3222|homeobox C5##BC050442|HOXC4|3221|homeobox C4##NM_153633|HOXC4|3221|homeobox C4##EU446482|HOXC6|3223|homeobox C6	0.130895	
chr2	128173581	128173678	reg1024357.p1	5.391	+	AF234262 AF239798 BC136293 AF111105 NM_006609	-72891	-	TSC_hg19_v1_chr2_-_128051744 M31899 NM_000122	-121876	-	TSC_hg19_v1_chr2_-_128051743 AK307338 AK222465 BC008820 AK300250	-121908	-	TSC_hg19_v1_chr2_+_128176007 NM_000312 AK298449 AK303773 AK298280 AK298454 X02750	2373	+	TSC_hg19_v1_chr2_+_128176019 BC034377	2397	+	BC065279 BC110536 BC110537 TSC_hg19_v1_chr2_-_128284054 AK000868 AL834178 AK296848 AK027561 AK295970 AK309006 AK056881 AK294669 NM_017969	110336	-	AF239798|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##BC136293|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##AF111105|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##NM_006609|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##M31899|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##NM_000122|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK307338|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK222465|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##BC008820|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK300250|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##NM_000312|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298449|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK303773|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298280|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298454|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##X02750|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##BC034377|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##BC065279|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110536|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110537|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK000868|IWS1|55677|IWS1 homolog (S. cerevisiae)##AL834178|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK296848|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK027561|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK295970|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK309006|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK056881|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK294669|IWS1|55677|IWS1 homolog (S. cerevisiae)##NM_017969|IWS1|55677|IWS1 homolog (S. cerevisiae)	0.280026	CTCF.p2:4:0.280
chr4	172108421	172108513	reg1022524.p2	5.391	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-1097053	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-1097269	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-1160962	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	626177	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	1981485	+	BC043556 TSC_hg19_v1_chr4_-_174090314	1981843	-	BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.678024	CTCF.p2:-6:0.678
chr6	31342084	31342163	reg1022210.p1	5.391	+	TSC_hg19_v1_chr6_-_31324990 AK124160 NM_005514 L42024	-17125	-	AK129796 AK130137 AK130166 AK130169 AK290570 AK292226 AK300685 AK301008 AK303541 AK309345 AK310586 AK313911 TSC_hg19_v1_chr6_-_31324957 BX647315	-17166	-	D14343 M28204 AF436095 AF436096 L20086 L20088 L20089 M86403 DQ336696 AF436090 AF436091 AF436092 AF436093 D87665 M12678 M15470 M28203 TSC_hg19_v1_chr6_-_31324946 BC007243 DQ336697 AF006634 AF022783 AF026218 AF170577 AF189017 AF418978 AF436098 AJ634528 AM711637 D25275 D31816 D49824 D50290 D50292 D50294 D50295 D50299 D50300 D83043 D85761 D85762 FM205711 L04695 L04696 L07743 L09736 L11603 L11604 L11666 L15005 L17005 L19923 L19937 L22027 L22028 L24373 L33922 L36318 L36591 L37880 L37881 L38504 L41214 L41925 L42345 M24033 M28205 M32317 M32319 M32320 M77774 M77775 M77776 M77777 M77778 M81798 M84380 M84381 M84382 M84383 M84384 M84385 M84694 U01848 U03027 U03698 U03859 U04243 U04244 U04245 U04787 U09864 U09912 U11262 U11264 U11265 U11266 U11268 U11269 U14943 U17107 U17572 U21052 U21053 U27608 U29057 U29083 U29480 U30904 U30936 U31971 U35431 U35734 U36492 U38800 U40498 U63653 U70528 U80945 U88407 X61706 X61708 X64454 X73578 X77658 X81363 X84725 X90390 X90391 X91749 Y08995 Y09058 Y09118 Y13029 Y13567 Z15143 Z22651 Z33453 AF389378 AF428252 AJ535113 BC091497 AY007140 BC013187 M16102 AK026595 AK130155 AK130654	-17199	-	TSC_hg19_v1_chr6_+_31368497 AK310028	26354	+	BC016929 AK225393 L14848 NM_000247 NM_001177519 AK299135 AB590509 CU677769 AB506764 AY204547 AY750850	29259	+	TSC_hg19_v1_chr6_+_31430961 BX640979 AK093953 AK290875 L06175 AJ437509 BC106759 BC113853 BC114462	88859	+	AK124160|HLA-B|3106|major histocompatibility complex, class I, B##NM_005514|HLA-B|3106|major histocompatibility complex, class I, B##AK292226|HLA-B|3106|major histocompatibility complex, class I, B##AK300685|HLA-B|3106|major histocompatibility complex, class I, B##AK310586|HLA-B|3106|major histocompatibility complex, class I, B##AK313911|HLA-B|3106|major histocompatibility complex, class I, B##BX647315|HLA-B|3106|major histocompatibility complex, class I, B##M28204|HLA-B|3106|major histocompatibility complex, class I, B##AF436095|HLA-B|3106|major histocompatibility complex, class I, B##AF436096|HLA-B|3106|major histocompatibility complex, class I, B##DQ336696|HLA-B|3106|major histocompatibility complex, class I, B##AF436090|HLA-B|3106|major histocompatibility complex, class I, B##AF436091|HLA-B|3106|major histocompatibility complex, class I, B##AF436092|HLA-B|3106|major histocompatibility complex, class I, B##AF436093|HLA-B|3106|major histocompatibility complex, class I, B##D87665|HLA-B|3106|major histocompatibility complex, class I, B##M12678|HLA-B|3106|major histocompatibility complex, class I, B##M15470|HLA-B|3106|major histocompatibility complex, class I, B##M28203|HLA-B|3106|major histocompatibility complex, class I, B##BC007243|HLA-B|3106|major histocompatibility complex, class I, B##DQ336697|HLA-B|3106|major histocompatibility complex, class I, B##AF022783|HLA-B|3106|major histocompatibility complex, class I, B##AF026218|HLA-B|3106|major histocompatibility complex, class I, B##AF170577|HLA-B|3106|major histocompatibility complex, class I, B##AF189017|HLA-B|3106|major histocompatibility complex, class I, B##AF436098|HLA-B|3106|major histocompatibility complex, class I, B##AJ634528|HLA-B|3106|major histocompatibility complex, class I, B##D25275|HLA-B|3106|major histocompatibility complex, class I, B##D31816|HLA-B|3106|major histocompatibility complex, class I, B##D50290|HLA-B|3106|major histocompatibility complex, class I, B##D50292|HLA-B|3106|major histocompatibility complex, class I, B##D50294|HLA-B|3106|major histocompatibility complex, class I, B##D50295|HLA-B|3106|major histocompatibility complex, class I, B##D50300|HLA-B|3106|major histocompatibility complex, class I, B##D83043|HLA-B|3106|major histocompatibility complex, class I, B##L07743|HLA-B|3106|major histocompatibility complex, class I, B##L09736|HLA-B|3106|major histocompatibility complex, class I, B##L11603|HLA-B|3106|major histocompatibility complex, class I, B##L11604|HLA-B|3106|major histocompatibility complex, class I, B##L11666|HLA-B|3106|major histocompatibility complex, class I, B##L15005|HLA-B|3106|major histocompatibility complex, class I, B##L17005|HLA-B|3106|major histocompatibility complex, class I, B##L19937|HLA-B|3106|major histocompatibility complex, class I, B##L22027|HLA-B|3106|major histocompatibility complex, class I, B##L24373|HLA-B|3106|major histocompatibility complex, class I, B##L33922|HLA-B|3106|major histocompatibility complex, class I, B##L36591|HLA-B|3106|major histocompatibility complex, class I, B##L37880|HLA-B|3106|major histocompatibility complex, class I, B##L37881|HLA-B|3106|major histocompatibility complex, class I, B##L41925|HLA-B|3106|major histocompatibility complex, class I, B##L42345|HLA-B|3106|major histocompatibility complex, class I, B##M24033|HLA-B|3106|major histocompatibility complex, class I, B##M28205|HLA-B|3106|major histocompatibility complex, class I, B##M32317|HLA-B|3106|major histocompatibility complex, class I, B##M32319|HLA-B|3106|major histocompatibility complex, class I, B##M32320|HLA-B|3106|major histocompatibility complex, class I, B##M77774|HLA-B|3106|major histocompatibility complex, class I, B##M77776|HLA-B|3106|major histocompatibility complex, class I, B##M77778|HLA-B|3106|major histocompatibility complex, class I, B##M84380|HLA-B|3106|major histocompatibility complex, class I, B##M84382|HLA-B|3106|major histocompatibility complex, class I, B##U01848|HLA-B|3106|major histocompatibility complex, class I, B##U03027|HLA-B|3106|major histocompatibility complex, class I, B##U03859|HLA-B|3106|major histocompatibility complex, class I, B##U04244|HLA-B|3106|major histocompatibility complex, class I, B##U04245|HLA-B|3106|major histocompatibility complex, class I, B##U04787|HLA-B|3106|major histocompatibility complex, class I, B##U09864|HLA-B|3106|major histocompatibility complex, class I, B##U09912|HLA-B|3106|major histocompatibility complex, class I, B##U11262|HLA-B|3106|major histocompatibility complex, class I, B##U11264|HLA-B|3106|major histocompatibility complex, class I, B##U11265|HLA-B|3106|major histocompatibility complex, class I, B##U11266|HLA-B|3106|major histocompatibility complex, class I, B##U11268|HLA-B|3106|major histocompatibility complex, class I, B##U11269|HLA-B|3106|major histocompatibility complex, class I, B##U17107|HLA-B|3106|major histocompatibility complex, class I, B##U17572|HLA-B|3106|major histocompatibility complex, class I, B##U21052|HLA-B|3106|major histocompatibility complex, class I, B##U21053|HLA-B|3106|major histocompatibility complex, class I, B##U29057|HLA-B|3106|major histocompatibility complex, class I, B##U30904|HLA-B|3106|major histocompatibility complex, class I, B##U30936|HLA-B|3106|major histocompatibility complex, class I, B##U31971|HLA-B|3106|major histocompatibility complex, class I, B##U35431|HLA-B|3106|major histocompatibility complex, class I, B##U40498|HLA-B|3106|major histocompatibility complex, class I, B##U70528|HLA-B|3106|major histocompatibility complex, class I, B##U80945|HLA-B|3106|major histocompatibility complex, class I, B##U88407|HLA-B|3106|major histocompatibility complex, class I, B##X61708|HLA-B|3106|major histocompatibility complex, class I, B##X64454|HLA-B|3106|major histocompatibility complex, class I, B##X77658|HLA-B|3106|major histocompatibility complex, class I, B##X90390|HLA-B|3106|major histocompatibility complex, class I, B##X90391|HLA-B|3106|major histocompatibility complex, class I, B##X91749|HLA-B|3106|major histocompatibility complex, class I, B##Y13029|HLA-B|3106|major histocompatibility complex, class I, B##Y13567|HLA-B|3106|major histocompatibility complex, class I, B##Z15143|HLA-B|3106|major histocompatibility complex, class I, B##AF389378|HLA-B|3106|major histocompatibility complex, class I, B##BC091497|HLA-B|3106|major histocompatibility complex, class I, B##AY007140|HLA-B|3106|major histocompatibility complex, class I, B##BC013187|HLA-B|3106|major histocompatibility complex, class I, B##M16102|HLA-B|3106|major histocompatibility complex, class I, B##BC016929|MICA|100507436|MHC class I polypeptide-related sequence A##AK225393|MICA|100507436|MHC class I polypeptide-related sequence A##L14848|MICA|100507436|MHC class I polypeptide-related sequence A##NM_000247|MICA|100507436|MHC class I polypeptide-related sequence A##NM_001177519|MICA|100507436|MHC class I polypeptide-related sequence A##AK299135|MICA|100507436|MHC class I polypeptide-related sequence A##AB506764|MICA|100507436|MHC class I polypeptide-related sequence A##AY204547|MICA|100507436|MHC class I polypeptide-related sequence A##AY750850|MICA|100507436|MHC class I polypeptide-related sequence A##BX640979|HCP5|10866|HLA complex P5 (non-protein coding)##AK093953|HCP5|10866|HLA complex P5 (non-protein coding)##AK290875|HCP5|10866|HLA complex P5 (non-protein coding)##L06175|HCP5|10866|HLA complex P5 (non-protein coding)##BC106759|HCP5|10866|HLA complex P5 (non-protein coding)##BC113853|HCP5|10866|HLA complex P5 (non-protein coding)##BC114462|HCP5|10866|HLA complex P5 (non-protein coding)	0.830068	CTCF.p2:0:0.830
chr7	7221426	7221558	reg1027687.p1	5.391	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-355594	-	AK296026 CU679629 AK000993 TSC_hg19_v1_chr7_-_6865849	-355654	-	AK314983 BC034495 NM_001099697 NM_173565	-427753	+	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	755	+	BC136892 BC144431 AJ890451 NM_001037763	353962	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	385096	+	BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK296026|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK000993|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)	0.069168	
chr8	67976463	67976596	reg1024175.p1	5.391	+	TSC_hg19_v1_chr8_-_67974551 NM_006837 BX648542	-1970	-	TSC_hg19_v1_chr8_-_67974369 BC007272 BC001859 U70734 U65928 AK310434 AK311071 BC001187 AK056967	-2176	-	AK128519 TSC_hg19_v1_chr8_-_67974217 AB463539 CR541678	-2341	-	TSC_hg19_v1_chr8_+_67976626 AM156947 BX649147 NM_024790 BC029445 AK096205 AB527449 AK127108	107	+	NM_006421 TSC_hg19_v1_chr8_-_68256017	279436	-	BC030256 TSC_hg19_v1_chr8_+_68256207	279626	+	NM_006837|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##BX648542|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##BC007272|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##BC001859|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##U70734|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##U65928|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##AK310434|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##AK311071|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##BC001187|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##AK056967|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##AK128519|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##CR541678|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##AM156947|CSPP1|79848|centrosome and spindle pole associated protein 1##BX649147|CSPP1|79848|centrosome and spindle pole associated protein 1##NM_024790|CSPP1|79848|centrosome and spindle pole associated protein 1##BC029445|CSPP1|79848|centrosome and spindle pole associated protein 1##AK096205|CSPP1|79848|centrosome and spindle pole associated protein 1##AK127108|CSPP1|79848|centrosome and spindle pole associated protein 1##NM_006421|ARFGEF1|10565|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)	0.908958	CTCF.p2:-13:0.909
chrX	35908897	35909032	reg1025196.p2	5.391	+	NM_001099921	-92506	+	BC035026 NM_152631 AK093101 AX747923 CU690032	-948035	+	TSC_hg19_v1_chrX_-_34675406 BC039242 NM_031442	-1233556	-	NM_152632 AK126295 BC027936 CU693328	28918	+	AK093920 AX748365 NM_173695	156088	+	NM_001098843	345086	+	NM_001099921|MAGEB16|139604|melanoma antigen family B, 16##BC035026|FAM47B|170062|family with sequence similarity 47, member B##NM_152631|FAM47B|170062|family with sequence similarity 47, member B##AK093101|FAM47B|170062|family with sequence similarity 47, member B##BC039242|TMEM47|83604|transmembrane protein 47##NM_031442|TMEM47|83604|transmembrane protein 47##NM_152632|CXorf22|170063|chromosome X open reading frame 22##AK126295|CXorf22|170063|chromosome X open reading frame 22##BC027936|CXorf22|170063|chromosome X open reading frame 22##AK093920|CXorf59|286464|chromosome X open reading frame 59##NM_173695|CXorf59|286464|chromosome X open reading frame 59##NM_001098843|CXorf30|645090|chromosome X open reading frame 30	0.321694	CTCF.p2:0:0.322
chr12	6176840	6177016	reg1027798.p2	5.390	+	AJ272204 NM_020373	-121531	-	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	-122454	-	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	-573590	+	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	56831	-	TSC_hg19_v1_chr12_+_6309565 NM_001769 AK315219 AK308700 AK296332 AK309527 AY966455 X60111 AK296894 AK298431 BC011988 M38690 AY423720 DQ891314 DQ894498 AB590218 CU680148 L34068	132642	+	AK001527 NM_018173 BC104751 BC105961 BC109095	242705	+	AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor##NM_001769|CD9|928|CD9 molecule##AK315219|CD9|928|CD9 molecule##AK308700|CD9|928|CD9 molecule##AK296332|CD9|928|CD9 molecule##AK309527|CD9|928|CD9 molecule##AY966455|CD9|928|CD9 molecule##X60111|CD9|928|CD9 molecule##AK296894|CD9|928|CD9 molecule##AK298431|CD9|928|CD9 molecule##BC011988|CD9|928|CD9 molecule##M38690|CD9|928|CD9 molecule##AY423720|CD9|928|CD9 molecule##DQ891314|CD9|928|CD9 molecule##DQ894498|CD9|928|CD9 molecule##L34068|CD9|928|CD9 molecule##AK001527|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_018173|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC104751|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC105961|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC109095|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6	0.813194	CTCF.p2:4:0.813
chr22	36784392	36784477	reg1020764.p1	5.390	+	TSC_hg19_v1_chr22_-_36784062 NM_002473	-376	-	TSC_hg19_v1_chr22_-_36784013 AK304840 AK291609 AB191263	-426	-	AK131080 TSC_hg19_v1_chr22_-_36783982 BC049849	-455	-	TSC_hg19_v1_chr22_-_36877665 BC013726 BC050610 AF480262 NM_012473 CR456601	93245	-	TSC_hg19_v1_chr22_-_36903081 BC027716 BC015726	118624	-	AK025714 AK225347 TSC_hg19_v1_chr22_-_36903088 AK315555 NM_024955 BC040351 NM_001102371	118683	-	NM_002473|MYH9|4627|myosin, heavy chain 9, non-muscle##AK304840|MYH9|4627|myosin, heavy chain 9, non-muscle##AK291609|MYH9|4627|myosin, heavy chain 9, non-muscle##AB191263|MYH9|4627|myosin, heavy chain 9, non-muscle##AK131080|MYH9|4627|myosin, heavy chain 9, non-muscle##BC049849|MYH9|4627|myosin, heavy chain 9, non-muscle##BC013726|TXN2|25828|thioredoxin 2##BC050610|TXN2|25828|thioredoxin 2##AF480262|TXN2|25828|thioredoxin 2##NM_012473|TXN2|25828|thioredoxin 2##CR456601|TXN2|25828|thioredoxin 2##BC027716|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC015726|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	0.0	
chr22	50911764	50911910	reg1026691.p1	5.390	+	BC046169 TSC_hg19_v1_chr22_-_50893787 BC056915	-18071	-	AB014585 TSC_hg19_v1_chr22_+_50781776 BC041698 AK302472	-130034	+	TSC_hg19_v1_chr22_+_50781755 NM_001242898 NM_001242899 NM_001242900 NM_014678 BC032664 BC006568 BC052995	-130094	+	EU831421 EU831514 BC111424 BC087612 TSC_hg19_v1_chr22_-_50913465 BC040031 AK057985 NM_002972	1551	-	TSC_hg19_v1_chr22_+_50919971 AK024788 AK225097 NM_024866 AB236970 NM_001253845 AK090635 AB463404 AB121034 AF529213	8286	+	BC012025 NM_017584 CR456478 BC073848 AY064416 BC064395 AB528181 AY738258 CU013028 CU013316 CU687262	13432	+	BC046169|SBF1|6305|SET binding factor 1##BC056915|SBF1|6305|SET binding factor 1##AB014585|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC041698|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##AK302472|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242898|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242899|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242900|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_014678|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC032664|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC006568|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC052995|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##EU831421|SBF1|6305|SET binding factor 1##EU831514|SBF1|6305|SET binding factor 1##BC087612|SBF1|6305|SET binding factor 1##BC040031|SBF1|6305|SET binding factor 1##AK057985|SBF1|6305|SET binding factor 1##NM_002972|SBF1|6305|SET binding factor 1##AK024788|ADM2|79924|adrenomedullin 2##NM_024866|ADM2|79924|adrenomedullin 2##AB236970|ADM2|79924|adrenomedullin 2##NM_001253845|ADM2|79924|adrenomedullin 2##AK090635|ADM2|79924|adrenomedullin 2##AB121034|ADM2|79924|adrenomedullin 2##AF529213|ADM2|79924|adrenomedullin 2##BC012025|MIOX|55586|myo-inositol oxygenase##NM_017584|MIOX|55586|myo-inositol oxygenase##CR456478|MIOX|55586|myo-inositol oxygenase##BC073848|MIOX|55586|myo-inositol oxygenase##AY064416|MIOX|55586|myo-inositol oxygenase##BC064395|MIOX|55586|myo-inositol oxygenase##AY738258|MIOX|55586|myo-inositol oxygenase##CU013028|MIOX|55586|myo-inositol oxygenase##CU013316|MIOX|55586|myo-inositol oxygenase	0.024505	
chr5	54620778	54620894	reg1026638.p1	5.390	+	AK291649 AK304788 TSC_hg19_v1_chr5_+_54603828 D29641 BC065258 AB527662	-17002	+	TSC_hg19_v1_chr5_+_54603816 BC104996 BC113509 BC028604	-17030	+	NM_015360 BC105291 BX640789	-17241	+	BC040295 CU691780 AB000888 BC117133 BC143281 BC168254 TSC_hg19_v1_chr5_-_54830793 AF017116 BC039847 AF014402 AF014403 BC008787 NM_003711 NM_176895	209832	-	TSC_hg19_v1_chr5_-_55008090 BC101361 BC101362 AK075190	387250	-	TSC_hg19_v1_chr5_-_55008148 AK122957 BC066891 NM_173514	387312	-	AK291649|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##AK304788|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##D29641|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC065258|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC104996|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC113509|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC028604|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##NM_015360|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC105291|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BX640789|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC040295|RNF138P1|379013|ring finger protein 138 pseudogene 1##AB000888|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC117133|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC143281|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC168254|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF017116|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC039847|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF014402|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF014403|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC008787|PPAP2A|8611|phosphatidic acid phosphatase type 2A##NM_003711|PPAP2A|8611|phosphatidic acid phosphatase type 2A##NM_176895|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC101361|SLC38A9|153129|solute carrier family 38, member 9##BC101362|SLC38A9|153129|solute carrier family 38, member 9##AK075190|SLC38A9|153129|solute carrier family 38, member 9##AK122957|SLC38A9|153129|solute carrier family 38, member 9##BC066891|SLC38A9|153129|solute carrier family 38, member 9##NM_173514|SLC38A9|153129|solute carrier family 38, member 9	0.980679	CTCF.p2:1:0.981
chr6	140203073	140203253	reg1008376.p2	5.390	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-507379	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-507402	-	NM_001168389 NM_001168388	-507740	-	BC095542 GU727635 M73482 NM_002511	2206701	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	2265227	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	2265243	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.0	
chr19	1590822	1590933	reg1026747.p1	5.389	+	DQ225272 DQ225273 TSC_hg19_v1_chr19_-_1567994 AY950680 NM_001174118 NM_203304	-22912	-	AK054808 NM_001243079	-66805	+	BC040620 NM_213604	-77690	-	AB528617 AF072247 NM_003926 TSC_hg19_v1_chr19_-_1592683	1781	-	BC009372 TSC_hg19_v1_chr19_-_1592751 AK290882 BC043619	1851	-	TSC_hg19_v1_chr19_-_1605429 BC000462 BC003594 D55636	14554	-	DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)##DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)##AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)##NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)##NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)##AK054808|PLK5|126520|polo-like kinase 5##NM_001243079|PLK5|126520|polo-like kinase 5##BC040620|ADAMTSL5|339366|ADAMTS-like 5##NM_213604|ADAMTSL5|339366|ADAMTS-like 5##AF072247|MBD3|53615|methyl-CpG binding domain protein 3##NM_003926|MBD3|53615|methyl-CpG binding domain protein 3##BC009372|MBD3|53615|methyl-CpG binding domain protein 3##AK290882|MBD3|53615|methyl-CpG binding domain protein 3##BC043619|MBD3|53615|methyl-CpG binding domain protein 3##BC000462|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##BC003594|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##D55636|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI	0.817974	CTCF.p2:-9:0.818
chr22	22555631	22555754	reg1027999.p2	5.389	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	-5514	+	X02422 TSC_hg19_v1_chr22_+_22550141	-5563	+	TSC_hg19_v1_chr22_+_22385369 AF026922	-170327	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	13572	+	BC017922 NM_007128 CR456609 CU013205 CU013493 AB590106	43519	+	TSC_hg19_v1_chr22_+_22652513 BC033148 AK090629 AX746545 BX641141	96827	+	BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57##BC017922|VPREB1|7441|pre-B lymphocyte 1##NM_007128|VPREB1|7441|pre-B lymphocyte 1##CR456609|VPREB1|7441|pre-B lymphocyte 1##CU013205|VPREB1|7441|pre-B lymphocyte 1##CU013493|VPREB1|7441|pre-B lymphocyte 1##BC033148|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##AK090629|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##BX641141|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene	0.213506	
chr22	37495213	37495315	reg1025950.p1	5.389	+	TSC_hg19_v1_chr22_+_37447781 NM_024681 BC025403 BC031038 BC009961 AK022304	-47485	+	TSC_hg19_v1_chr22_+_37415797 BC016737 AB208824	-79426	+	NM_001013436 NM_001130517 NM_021126 TSC_hg19_v1_chr22_+_37415789	-79519	+	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	4311	-	CR456446 TSC_hg19_v1_chr22_-_37505748	10414	-	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	50688	-	NM_024681|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC025403|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC031038|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC009961|KCTD17|79734|potassium channel tetramerisation domain containing 17##AK022304|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC016737|MPST|4357|mercaptopyruvate sulfurtransferase##AB208824|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001013436|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001130517|MPST|4357|mercaptopyruvate sulfurtransferase##NM_021126|MPST|4357|mercaptopyruvate sulfurtransferase##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##CR456446|TMPRSS6|164656|transmembrane protease, serine 6##BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta	0.915352	CTCF.p2:13:0.915
chr11	11643746	11643889	reg1027377.p1	5.388	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	-239	-	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-764031	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-764299	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	219199	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	219674	+	TSC_hg19_v1_chr11_+_11863521 BC071559 AK027362 AK092290 AX747455	219751	+	AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47##BC071559|USP47|55031|ubiquitin specific peptidase 47##AK027362|USP47|55031|ubiquitin specific peptidase 47##AK092290|USP47|55031|ubiquitin specific peptidase 47	0.686582	CTCF.p2:-95:0.687
chr5	55274119	55274239	reg1022409.p2	5.388	+	NM_001242636 NM_001242639	-125030	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-126910	+	NM_001166534 AK093439 AX748127	-211454	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	16584	-	AK123389 NM_024669	255006	-	NM_005921	836720	+	NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##NM_001166534|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##AK093439|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0804	
chr9	80366490	80366612	reg1026896.p1	5.388	+	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	-103320	-	AK027023 TSC_hg19_v1_chr9_+_79968352	-398203	+	TSC_hg19_v1_chr9_+_79792474 AB054005	-574043	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	279633	-	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	484479	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	545507	+	BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1	0.937218	CTCF.p2:8:0.937
chr12	130399316	130399411	reg1026908.p2	5.387	+	BC114626 BC114936 NM_133448 AB061814	-11152	-	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	-1061276	+	BC043528 TSC_hg19_v1_chr12_+_129337985	-1061379	+	AK056047 TSC_hg19_v1_chr12_-_130646911	247493	-	TSC_hg19_v1_chr12_+_130647008 BC070037 NM_007197	247647	+	NM_001190971 NM_004764	423069	+	BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056047|FLJ31485|440119|uncharacterized LOC440119##BC070037|FZD10|11211|frizzled family receptor 10##NM_007197|FZD10|11211|frizzled family receptor 10##NM_001190971|PIWIL1|9271|piwi-like 1 (Drosophila)##NM_004764|PIWIL1|9271|piwi-like 1 (Drosophila)	0.921785	CTCF.p2:8:0.922
chr1	45142939	45143045	reg1027401.p1	5.387	+	BC026115 NM_001145636	-2599	+	AK296548 TSC_hg19_v1_chr1_-_45140143 BC007521	-2844	-	CR457348 AK026006 AK225405 TSC_hg19_v1_chr1_-_45140099 BC064520 NM_024587 AL832539	-2905	-	TSC_hg19_v1_chr1_+_45205518 AB264115 NM_006845	62506	+	AK124208 AK300756 AK312606 TSC_hg19_v1_chr1_+_45205533 BC008764 U63743 BC014924	62550	+	TSC_hg19_v1_chr1_+_45205568 AK290688 AB590244 BT006759 CR450302 CU677119 CU679091 DQ893800 EU176178	62589	+	BC026115|C1orf228|339541|chromosome 1 open reading frame 228##NM_001145636|C1orf228|339541|chromosome 1 open reading frame 228##AK296548|TMEM53|79639|transmembrane protein 53##BC007521|TMEM53|79639|transmembrane protein 53##CR457348|TMEM53|79639|transmembrane protein 53##AK026006|TMEM53|79639|transmembrane protein 53##AK225405|TMEM53|79639|transmembrane protein 53##BC064520|TMEM53|79639|transmembrane protein 53##NM_024587|TMEM53|79639|transmembrane protein 53##AL832539|TMEM53|79639|transmembrane protein 53##AB264115|KIF2C|11004|kinesin family member 2C##NM_006845|KIF2C|11004|kinesin family member 2C##AK300756|KIF2C|11004|kinesin family member 2C##AK312606|KIF2C|11004|kinesin family member 2C##BC008764|KIF2C|11004|kinesin family member 2C##U63743|KIF2C|11004|kinesin family member 2C##BC014924|KIF2C|11004|kinesin family member 2C##AK290688|KIF2C|11004|kinesin family member 2C##BT006759|KIF2C|11004|kinesin family member 2C##CR450302|KIF2C|11004|kinesin family member 2C##DQ893800|KIF2C|11004|kinesin family member 2C##EU176178|KIF2C|11004|kinesin family member 2C	0.826532	CTCF.p2:12:0.827
chr19	6591082	6591202	reg1026270.p2	5.387	+	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	-36	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	-110	-	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	-60116	+	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	16	-	TSC_hg19_v1_chr19_-_6670094 CR541854 CR541871 AB528780 AF036581 AY028261 AY358812 BC018058 AK292037	78982	-	AF064090 NM_003807 NM_172014	79456	-	BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##BT007211|CD70|970|CD70 molecule##NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule##CR541854|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541871|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF036581|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY028261|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY358812|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC018058|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AK292037|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF064090|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_003807|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_172014|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14	0.011298	
chr3	138921310	138921432	reg1026230.p1	5.387	+	AK128089 NM_001134657	-157638	-	BC137146 BC137145 AK127998 NM_001013650	-181613	-	NM_001134659	-196262	-	TSC_hg19_v1_chr3_+_139062861 AF226045 NM_020191 AF063603 AK292852 BC009296 AK075436 AB208981	141519	+	TSC_hg19_v1_chr3_-_139108462 AK304219 X70476 BC000326	187073	-	TSC_hg19_v1_chr3_-_139108486 AK128561	187126	-	AK128089|PRR23C|389152|proline rich 23C##NM_001134657|PRR23C|389152|proline rich 23C##BC137146|PRR23B|389151|proline rich 23B##BC137145|PRR23B|389151|proline rich 23B##AK127998|PRR23B|389151|proline rich 23B##NM_001013650|PRR23B|389151|proline rich 23B##NM_001134659|PRR23A|729627|proline rich 23A##AF226045|MRPS22|56945|mitochondrial ribosomal protein S22##NM_020191|MRPS22|56945|mitochondrial ribosomal protein S22##AF063603|MRPS22|56945|mitochondrial ribosomal protein S22##AK292852|MRPS22|56945|mitochondrial ribosomal protein S22##BC009296|MRPS22|56945|mitochondrial ribosomal protein S22##AK075436|MRPS22|56945|mitochondrial ribosomal protein S22##AB208981|MRPS22|56945|mitochondrial ribosomal protein S22##AK304219|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##X70476|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##BC000326|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)	0.0	
chr9	136890978	136891159	reg1029141.p2	5.387	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	-33622	-	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-286082	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-287590	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	42125	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	42558	-	NM_017588 TSC_hg19_v1_chr9_+_137001212	110142	+	BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3##NM_017588|WDR5|11091|WD repeat domain 5	0.0	
chr11	103800396	103800568	reg1025544.p2	5.386	+	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	-820283	+	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	-837559	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	-837741	-	NM_001001711 AF429971 AK093336 AX748060 BC022018 BC022017 BC021710 BC021172	106856	+	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	234312	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	234558	-	AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_001001711|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AF429971|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK093336|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022018|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022017|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021710|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021172|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D	0.0	
chr11	35412710	35412889	reg1027312.p1	5.386	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	-133974	-	TSC_hg19_v1_chr11_+_35198199 AK129808	-214587	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-251939	+	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	27912	-	TSC_hg19_v1_chr11_-_35441106 NM_004171	28304	-	S83375 U01824 TSC_hg19_v1_chr11_-_35441572 AK122843 NM_001195728 NM_001252652	28756	-	CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK129808|CD44|960|CD44 molecule (Indian blood group)##AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.0	
chr1	160386334	160386453	reg1026416.p1	5.386	+	NM_020335 TSC_hg19_v1_chr1_+_160370394	-16014	+	M96739 AK313700 NM_005598 BC013789	-49529	+	NM_001098398 NM_004371 U24105	-72990	-	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	106636	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	162854	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	162895	-	NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##NM_001098398|COPA|1314|coatomer protein complex, subunit alpha##NM_004371|COPA|1314|coatomer protein complex, subunit alpha##U24105|COPA|1314|coatomer protein complex, subunit alpha##AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule	0.988023	CTCF.p2:-6:0.988
chr11	66610866	66611015	reg1026864.p2	5.386	+	AF121951 NM_001032279 NM_005133 BC093726 BC093728 TSC_hg19_v1_chr11_+_66610911 BC052622 Y13835	-35	+	CU688443 TSC_hg19_v1_chr11_-_66610832	-171	-	TSC_hg19_v1_chr11_+_66512242 AK302025	-98640	+	TSC_hg19_v1_chr11_+_66624583 BC071866	13608	+	NM_024036 BC015581 BC007718	13995	+	TSC_hg19_v1_chr11_-_66639602 AB527412 CU679988	28675	-	AF121951|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##NM_001032279|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##NM_005133|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##BC093726|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##BC093728|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##BC052622|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##Y13835|RCE1|9986|RCE1 homolog, prenyl protein protease (S. cerevisiae)##AK302025|C11orf80|79703|chromosome 11 open reading frame 80##BC071866|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4##NM_024036|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4##BC015581|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4##BC007718|LRFN4|78999|leucine rich repeat and fibronectin type III domain containing 4	0.0	
chr2	139473915	139474022	reg1024503.p1	5.386	+	TSC_hg19_v1_chr2_+_139259500 AK021919	-214478	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-214575	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	-752034	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	63838	-	TSC_hg19_v1_chr2_-_142888540 AK054663	3414588	-	AF176832 NM_018557	3415301	-	NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B	0.0	
chr21	45579688	45579869	reg1023968.p1	5.386	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-26217	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-26273	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-52479	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	80988	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	81079	-	AF194032 NM_013369 NM_175867	102320	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.031082	
chr3	114166490	114166644	reg1025623.p1	5.386	+	AF139460 NM_001164342	-64079	-	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	-153714	+	NM_007136 X65233	-210143	-	BC029041 NM_001164347	176485	-	AK315307 NM_001164346 TSC_hg19_v1_chr3_-_114343793	177227	-	AK225788 NM_001164344 NM_001164345	311553	-	AF139460|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164342|ZBTB20|26137|zinc finger and BTB domain containing 20##EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20##AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20	0.133879	
chr5	160076454	160076572	reg1025251.p1	5.386	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-227610	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-227659	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-230408	-	AK025130 TSC_hg19_v1_chr5_-_160112393	35826	-	AB018258 AK295081 AK090832 AX746642 NM_025153	202618	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	898613	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.0	
chr5	43065085	43065251	reg1026043.p2	5.386	+	AB463523 BC067873 AY032883 NM_001014279	-24872	-	TSC_hg19_v1_chr5_-_42993436 AK056817	-71722	-	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	-253177	-	AK307963 TSC_hg19_v1_chr5_+_43121018 BC045109	55833	+	TSC_hg19_v1_chr5_+_43121609 AK299315 AK307977	56446	+	AK057343 NM_003432 TSC_hg19_v1_chr5_+_43121669 AK310735 BC017923	56516	+	BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39##AK056817|FLJ32255|643977|uncharacterized LOC643977##Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK307963|ZNF131|7690|zinc finger protein 131##AK299315|ZNF131|7690|zinc finger protein 131##AK307977|ZNF131|7690|zinc finger protein 131##AK057343|ZNF131|7690|zinc finger protein 131##NM_003432|ZNF131|7690|zinc finger protein 131##AK310735|ZNF131|7690|zinc finger protein 131##BC017923|ZNF131|7690|zinc finger protein 131	0.118283	
chr5	6583227	6583308	reg1026071.p1	5.386	+	TSC_hg19_v1_chr5_+_6449114 AK057805	-134078	+	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	-134414	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	-204617	-	TSC_hg19_v1_chr5_-_6633158 AK291144 BC137083 AK298980	49887	-	TSC_hg19_v1_chr5_-_6633411 AK055456 AB255451 NM_001193455 NM_017755	50142	-	NM_001047 TSC_hg19_v1_chr5_+_6633508	50243	+	AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##AK291144|NSUN2|54888|NOP2/Sun domain family, member 2##BC137083|NSUN2|54888|NOP2/Sun domain family, member 2##AK298980|NSUN2|54888|NOP2/Sun domain family, member 2##AK055456|NSUN2|54888|NOP2/Sun domain family, member 2##AB255451|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001193455|NSUN2|54888|NOP2/Sun domain family, member 2##NM_017755|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001047|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)	0.498977	CTCF.p2:10:0.499
chr7	122190748	122190855	reg1025822.p1	5.386	+	AY726588 BC127714 BC127715 NM_001024613 NM_001160264 BC136684 BC144367 AK300742	-246212	-	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	-406512	-	TSC_hg19_v1_chr7_+_121513214 U88967	-677580	+	BC022038 AF447589 NM_139175 AK098524	148396	-	AK058116 AK098654 BC029264 NM_198085	152191	-	AY264289 TSC_hg19_v1_chr7_-_122526515 AF401638 BC054339 BC136601 BC144278 BC144279 AK098170 AK126518	335697	-	AY726588|FEZF1|389549|FEZ family zinc finger 1##BC127714|FEZF1|389549|FEZ family zinc finger 1##BC127715|FEZF1|389549|FEZ family zinc finger 1##NM_001024613|FEZF1|389549|FEZ family zinc finger 1##NM_001160264|FEZF1|389549|FEZ family zinc finger 1##BC136684|FEZF1|389549|FEZ family zinc finger 1##BC144367|FEZF1|389549|FEZ family zinc finger 1##AK300742|FEZF1|389549|FEZ family zinc finger 1##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase##U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##BC022038|RNF133|168433|ring finger protein 133##AF447589|RNF133|168433|ring finger protein 133##NM_139175|RNF133|168433|ring finger protein 133##AK098524|RNF133|168433|ring finger protein 133##AK058116|RNF148|378925|ring finger protein 148##AK098654|RNF148|378925|ring finger protein 148##BC029264|RNF148|378925|ring finger protein 148##NM_198085|RNF148|378925|ring finger protein 148##AY264289|CADPS2|93664|Ca++-dependent secretion activator 2##AF401638|CADPS2|93664|Ca++-dependent secretion activator 2##BC054339|CADPS2|93664|Ca++-dependent secretion activator 2##BC136601|CADPS2|93664|Ca++-dependent secretion activator 2##BC144278|CADPS2|93664|Ca++-dependent secretion activator 2##BC144279|CADPS2|93664|Ca++-dependent secretion activator 2##AK126518|CADPS2|93664|Ca++-dependent secretion activator 2	0.0	
chr6	151042050	151042230	reg1028864.p2	5.385	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	-121120	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	-351982	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-577899	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	144692	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	144781	+	TSC_hg19_v1_chr6_+_151187064 AL117452	144961	+	NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AL117452|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.190805	
chr6	39949101	39949217	reg1003302.p2	5.385	+	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-46945	-	AB527188 AJ224328 NM_005943	-53774	-	NM_015345 AL833083 BC128388	-188341	+	BC142616 AB033072 NM_020737 AK291474	605985	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	1057790	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	1061187	+	AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##NM_015345|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AL833083|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC128388|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2	0.0	
chrX	39511717	39511848	reg1027422.p1	5.385	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-848242	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-848322	+	BC008908 NM_021242	-848710	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	444910	-	BC114220 NM_001123383 NM_001123384	524799	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	928404	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	1.128396	CTCF.p2:8:0.994
chr16	50701569	50701698	reg1026169.p2	5.384	+	TSC_hg19_v1_chr16_-_50647562 AK124375	-54055	-	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	-119307	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	-298803	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	13544	-	TSC_hg19_v1_chr16_-_50715246 NM_001144972 NM_153337 NM_182854	13668	-	AF178930 AY187243 NM_022162 AY187244 AY187246 AB527390	29468	+	BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20##NM_001144972|SNX20|124460|sorting nexin 20##NM_153337|SNX20|124460|sorting nexin 20##NM_182854|SNX20|124460|sorting nexin 20##AF178930|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187243|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_022162|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187244|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187246|NOD2|64127|nucleotide-binding oligomerization domain containing 2	1.376936	CTCF.p2:-25:0.994	CTCF.p2:30:0.383
chr1	66969661	66969811	reg1025786.p2	5.384	+	TSC_hg19_v1_chr1_+_66798096 AK294441	-171641	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	-171883	+	AB209081 NM_001037340 AK290006	-511333	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	30148	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	248388	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	248429	+	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1	0.131483	
chr20	34149191	34149320	reg1030388.p1	5.384	+	TSC_hg19_v1_chr20_+_34129833 CU679479 CU680742 AF091085	-19410	+	AK074550 BC009765 TSC_hg19_v1_chr20_+_34129829 AK096484 AK300916	-19425	+	NM_015966 NM_198398 TSC_hg19_v1_chr20_+_34129827 AF308298 AF077030 AF151812 EF206690 BC014014	-19453	+	BC029951 AY461812 TSC_hg19_v1_chr20_-_34195432	46167	-	TSC_hg19_v1_chr20_+_34203752 AF262992 NM_003116 BC143783 AB464242	54580	+	NM_003915	92575	-	AF091085|ERGIC3|51614|ERGIC and golgi 3##AK074550|ERGIC3|51614|ERGIC and golgi 3##BC009765|ERGIC3|51614|ERGIC and golgi 3##AK096484|ERGIC3|51614|ERGIC and golgi 3##AK300916|ERGIC3|51614|ERGIC and golgi 3##NM_015966|ERGIC3|51614|ERGIC and golgi 3##NM_198398|ERGIC3|51614|ERGIC and golgi 3##AF308298|ERGIC3|51614|ERGIC and golgi 3##AF077030|ERGIC3|51614|ERGIC and golgi 3##AF151812|ERGIC3|51614|ERGIC and golgi 3##EF206690|ERGIC3|51614|ERGIC and golgi 3##BC014014|ERGIC3|51614|ERGIC and golgi 3##BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene##AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene##AF262992|SPAG4|6676|sperm associated antigen 4##NM_003116|SPAG4|6676|sperm associated antigen 4##BC143783|SPAG4|6676|sperm associated antigen 4##NM_003915|CPNE1|8904|copine I	0.206939	CTCF.p2:7:0.207
chr20	61641959	61642059	reg1000073.p5	5.384	+	BC137288 BC137308 NM_080606	-3623	-	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-57884	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-57979	+	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	205514	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	225332	+	TSC_hg19_v1_chr20_-_61884664 AK308958	242724	-	BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7##AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4	0.0	
chr2	35653715	35653857	reg1030189.p1	5.383	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-1829441	-	AB020653 NM_015376	-1914845	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-1952090	+	TSC_hg19_v1_chr2_+_36582920 AY358371	929176	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	929616	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	1171496	-	BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	0.991489	CTCF.p2:16:0.991
chr2	97025154	97025312	reg1026776.p2	5.383	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-23697	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-23757	+	NM_178495 NM_001163524 BC034503	-33285	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	177252	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	278786	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	278834	-	BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_178495|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163524|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC034503|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.761161	CTCF.p2:14:0.761
chr4	157299305	157299410	reg1006980.p1	5.383	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	-424309	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	-474480	+	AB528059 AJ252011 NM_017419	-511957	-	AB590688 BC051876 BC094746 AF260738 AK300480 AF244813 AK313817 BC041783 BC065490 TSC_hg19_v1_chr4_-_157892334 AM922296 AB033831	592860	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	593121	-	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	593202	-	BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##BC051876|PDGFC|56034|platelet derived growth factor C##BC094746|PDGFC|56034|platelet derived growth factor C##AF260738|PDGFC|56034|platelet derived growth factor C##AK300480|PDGFC|56034|platelet derived growth factor C##AF244813|PDGFC|56034|platelet derived growth factor C##AK313817|PDGFC|56034|platelet derived growth factor C##BC041783|PDGFC|56034|platelet derived growth factor C##AM922296|PDGFC|56034|platelet derived growth factor C##AB033831|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C	0.339614	
chrX	134200361	134200462	reg1025121.p2	5.383	+	BC008096 TSC_hg19_v1_chrX_-_134186208 BC071991 AL117556 BC000393 BC019300 NM_001078172 NM_001134321	-14282	-	TSC_hg19_v1_chrX_+_134166384 NM_001078171 Y13374 AF038168 AF052096 BC106076 BC002385 BC002410	-34051	+	HQ258053 TSC_hg19_v1_chrX_-_134156520 BC063496 BC073159 BC113720 BC117393 BC086860 NM_001078173	-43868	-	AK123302 TSC_hg19_v1_chrX_-_134232743	32324	-	AF520814 AY352211 NM_001031705 NM_017863	105339	-	AK091687 AX747129 NM_001185063 NM_007131 AK290215	229561	-	BC008096|FAM127B|26071|family with sequence similarity 127, member B##BC071991|FAM127B|26071|family with sequence similarity 127, member B##AL117556|FAM127B|26071|family with sequence similarity 127, member B##BC000393|FAM127B|26071|family with sequence similarity 127, member B##BC019300|FAM127B|26071|family with sequence similarity 127, member B##NM_001078172|FAM127B|26071|family with sequence similarity 127, member B##NM_001134321|FAM127B|26071|family with sequence similarity 127, member B##NM_001078171|FAM127A|8933|family with sequence similarity 127, member A##Y13374|FAM127A|8933|family with sequence similarity 127, member A##AF038168|FAM127A|8933|family with sequence similarity 127, member A##AF052096|FAM127A|8933|family with sequence similarity 127, member A##BC106076|FAM127A|8933|family with sequence similarity 127, member A##BC002385|FAM127A|8933|family with sequence similarity 127, member A##BC002410|FAM127A|8933|family with sequence similarity 127, member A##HQ258053|FAM127C|441518|family with sequence similarity 127, member C##BC063496|FAM127C|441518|family with sequence similarity 127, member C##BC073159|FAM127C|441518|family with sequence similarity 127, member C##BC113720|FAM127C|441518|family with sequence similarity 127, member C##BC117393|FAM127C|441518|family with sequence similarity 127, member C##BC086860|FAM127C|441518|family with sequence similarity 127, member C##NM_001078173|FAM127C|441518|family with sequence similarity 127, member C##AK123302|LINC00087|644596|long intergenic non-protein coding RNA 87##AF520814|CXorf48|54967|chromosome X open reading frame 48##AY352211|CXorf48|54967|chromosome X open reading frame 48##NM_001031705|CXorf48|54967|chromosome X open reading frame 48##NM_017863|CXorf48|54967|chromosome X open reading frame 48##AK091687|ZNF75D|7626|zinc finger protein 75D##NM_001185063|ZNF75D|7626|zinc finger protein 75D##NM_007131|ZNF75D|7626|zinc finger protein 75D##AK290215|ZNF75D|7626|zinc finger protein 75D	0.147392	
chr17	61190664	61190798	reg1025511.p2	5.382	+	NM_025185	-103834	+	AK122947 AK093076 AX747906 BX648705 NM_152598	-305054	-	NM_001100875 BC035021	-306720	-	BC144357 TSC_hg19_v1_chr17_+_61271368	80630	+	BC091485 NM_001017917	327459	-	AK095244 NM_001017916 TSC_hg19_v1_chr17_-_61523715 AK301541 AK294403 BC002976 AK303177 AK316606 NM_001915	332905	-	NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_001100875|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC035021|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##BC091485|CYB561|1534|cytochrome b-561##NM_001017917|CYB561|1534|cytochrome b-561##AK095244|CYB561|1534|cytochrome b-561##NM_001017916|CYB561|1534|cytochrome b-561##AK301541|CYB561|1534|cytochrome b-561##AK294403|CYB561|1534|cytochrome b-561##BC002976|CYB561|1534|cytochrome b-561##AK303177|CYB561|1534|cytochrome b-561##AK316606|CYB561|1534|cytochrome b-561##NM_001915|CYB561|1534|cytochrome b-561	0.980404	CTCF.p2:2:0.980
chr2	175499691	175499787	reg1026689.p1	5.382	+	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	-442	-	TSC_hg19_v1_chr2_-_175462533 BC002914 X86019	-37258	-	BC036681 AK091200 AK315125 AX746845 BC028730 AL834154 TSC_hg19_v1_chr2_-_175351812 AK307896 BX537947 NM_001033045 NM_152529 BC035037	-147942	-	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	48015	-	TSC_hg19_v1_chr2_+_175584527 DQ895855	84839	+	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	129430	-	AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1##X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC036681|GPR155|151556|G protein-coupled receptor 155##AK091200|GPR155|151556|G protein-coupled receptor 155##AK315125|GPR155|151556|G protein-coupled receptor 155##BC028730|GPR155|151556|G protein-coupled receptor 155##AL834154|GPR155|151556|G protein-coupled receptor 155##AK307896|GPR155|151556|G protein-coupled receptor 155##BX537947|GPR155|151556|G protein-coupled receptor 155##NM_001033045|GPR155|151556|G protein-coupled receptor 155##NM_152529|GPR155|151556|G protein-coupled receptor 155##BC035037|GPR155|151556|G protein-coupled receptor 155##BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1##DQ895855|H3F3A|3020|H3 histone, family 3A##AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)	0.307567	CTCF.p2:-34:0.262
chr3	45097143	45097288	reg1029133.p1	5.382	+	AK312093 NM_003278 X64559 TSC_hg19_v1_chr3_+_45067794 BC011024 CU679874 CR541981 CR542009	-29413	+	TSC_hg19_v1_chr3_+_45017751 BC012831 AB384439 D29958	-79455	+	TSC_hg19_v1_chr3_+_45017742 AK315741 NM_015004 AK295779	-79478	+	AB527383 CU676820 TSC_hg19_v1_chr3_-_45187791	90571	-	TSC_hg19_v1_chr3_-_45187849 AY375452 AY026461	90636	-	TSC_hg19_v1_chr3_-_45187871 BC069254 AY167484 AY358779 AK314441 AF468010 AK026622	90660	-	AK312093|CLEC3B|7123|C-type lectin domain family 3, member B##NM_003278|CLEC3B|7123|C-type lectin domain family 3, member B##X64559|CLEC3B|7123|C-type lectin domain family 3, member B##BC011024|CLEC3B|7123|C-type lectin domain family 3, member B##CR541981|CLEC3B|7123|C-type lectin domain family 3, member B##CR542009|CLEC3B|7123|C-type lectin domain family 3, member B##BC012831|EXOSC7|23016|exosome component 7##D29958|EXOSC7|23016|exosome component 7##AK315741|EXOSC7|23016|exosome component 7##NM_015004|EXOSC7|23016|exosome component 7##AK295779|EXOSC7|23016|exosome component 7##AY375452|CDCP1|64866|CUB domain containing protein 1##AY026461|CDCP1|64866|CUB domain containing protein 1##BC069254|CDCP1|64866|CUB domain containing protein 1##AY167484|CDCP1|64866|CUB domain containing protein 1##AY358779|CDCP1|64866|CUB domain containing protein 1##AK314441|CDCP1|64866|CUB domain containing protein 1##AF468010|CDCP1|64866|CUB domain containing protein 1##AK026622|CDCP1|64866|CUB domain containing protein 1	0.994459	CTCF.p2:14:0.994
chr8	42040429	42040604	reg1025452.p2	5.382	+	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	-29983	+	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	-131017	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-286206	-	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	24572	-	AK289387 AK290575 NM_000930 NM_033011 TSC_hg19_v1_chr8_-_42065195	24678	-	TSC_hg19_v1_chr8_+_42128819 NM_001190720 NM_001242778 NM_001556	88292	+	NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue##AK289387|PLAT|5327|plasminogen activator, tissue##AK290575|PLAT|5327|plasminogen activator, tissue##NM_000930|PLAT|5327|plasminogen activator, tissue##NM_033011|PLAT|5327|plasminogen activator, tissue##NM_001190720|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001242778|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001556|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	0.0	
chrX	25739837	25739953	reg1024670.p2	5.382	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-705822	-	BC169334 TSC_hg19_v1_chrX_-_25031209	-708702	-	NM_016937 X06745 TSC_hg19_v1_chrX_+_24712066	-1027830	+	NM_173699 BC029525 AK057361	416591	+	AK097561 BC067286 NM_173523	470661	+	BC157859 NM_001136533	2025030	+	NM_139058|ARX|170302|aristaless related homeobox##BC169334|ARX|170302|aristaless related homeobox##NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2	0.980947	CTCF.p2:-22:0.981
chr1	198492446	198492613	reg1027589.p1	5.381	+	TSC_hg19_v1_chr1_+_198126162 NM_133494 AK313411	-366475	+	TSC_hg19_v1_chr1_+_197886502 AY273889 NM_020204	-606022	+	AJ296272 NM_001014434 AJ277915	-610890	+	NM_133262 NM_133326	17545	-	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	115644	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	115696	+	NM_133494|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##AK313411|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##AY273889|LHX9|56956|LIM homeobox 9##NM_020204|LHX9|56956|LIM homeobox 9##AJ296272|LHX9|56956|LIM homeobox 9##NM_001014434|LHX9|56956|LIM homeobox 9##AJ277915|LHX9|56956|LIM homeobox 9##NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	0.513337	CTCF.p2:-55:0.513
chr19	680339	680453	reg1024497.p1	5.381	+	TSC_hg19_v1_chr19_+_676391 NM_005860 AK291958 AK313341 BC005839 AY358917 BC033119 U76702	-4012	+	TSC_hg19_v1_chr19_+_663381 AK096031	-16965	+	TSC_hg19_v1_chr19_-_663219 AK289616 NM_194460	-17154	-	BC137161 BC144505 NM_214710	15064	-	TSC_hg19_v1_chr19_+_708934 NM_001040134 NM_002579 AK299809 AK315168 BC032449 Y14770	28553	+	TSC_hg19_v1_chr19_+_751132 BC052236 BX648389 BC042125 NM_173481	70733	+	NM_005860|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##AK291958|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##AK313341|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##BC005839|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##AY358917|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##BC033119|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##U76702|FSTL3|10272|follistatin-like 3 (secreted glycoprotein)##AK289616|RNF126|55658|ring finger protein 126##NM_194460|RNF126|55658|ring finger protein 126##BC137161|PRSS57|400668|protease, serine, 57##BC144505|PRSS57|400668|protease, serine, 57##NM_214710|PRSS57|400668|protease, serine, 57##NM_001040134|PALM|5064|paralemmin##NM_002579|PALM|5064|paralemmin##AK315168|PALM|5064|paralemmin##BC032449|PALM|5064|paralemmin##Y14770|PALM|5064|paralemmin##BC052236|C19orf21|126353|chromosome 19 open reading frame 21##BX648389|C19orf21|126353|chromosome 19 open reading frame 21##BC042125|C19orf21|126353|chromosome 19 open reading frame 21##NM_173481|C19orf21|126353|chromosome 19 open reading frame 21	0.012548	
chr22	40098440	40098552	reg1026986.p1	5.381	+	AF129133 AF142567 AF211189 AF393329 NM_001003406 NM_021096	-131739	+	TSC_hg19_v1_chr22_-_39928773 CR456443 BC037573 NM_194326	-169682	-	BC047711 TSC_hg19_v1_chr22_-_39928752 AK025423	-169745	-	BC033895 NM_152512	191297	-	AY069959 NM_004810 TSC_hg19_v1_chr22_+_40297087 AK303332 AK303512 AF236119 AJ011736 BC025692 AF042380 AF102694	198628	+	TSC_hg19_v1_chr22_+_40297183 AF129476 AF090456 CR456498 Y18051	198751	+	AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##CR456443|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC037573|RPS19BP1|91582|ribosomal protein S19 binding protein 1##NM_194326|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC047711|RPS19BP1|91582|ribosomal protein S19 binding protein 1##AK025423|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC033895|ENTHD1|150350|ENTH domain containing 1##NM_152512|ENTHD1|150350|ENTH domain containing 1##AY069959|GRAP2|9402|GRB2-related adaptor protein 2##NM_004810|GRAP2|9402|GRB2-related adaptor protein 2##AK303332|GRAP2|9402|GRB2-related adaptor protein 2##AK303512|GRAP2|9402|GRB2-related adaptor protein 2##AF236119|GRAP2|9402|GRB2-related adaptor protein 2##AJ011736|GRAP2|9402|GRB2-related adaptor protein 2##BC025692|GRAP2|9402|GRB2-related adaptor protein 2##AF042380|GRAP2|9402|GRB2-related adaptor protein 2##AF102694|GRAP2|9402|GRB2-related adaptor protein 2##AF129476|GRAP2|9402|GRB2-related adaptor protein 2##AF090456|GRAP2|9402|GRB2-related adaptor protein 2##CR456498|GRAP2|9402|GRB2-related adaptor protein 2##Y18051|GRAP2|9402|GRB2-related adaptor protein 2	0.610382	CTCF.p2:-11:0.610
chr3	12883337	12883463	reg1027398.p2	5.381	+	BC011514 BC070209 X03342 D28385 AK311909 TSC_hg19_v1_chr3_-_12883042 NM_000994 NM_001007073	-357	-	NM_001007074	-1452	-	GU727621 NM_001162499 NM_012298 BC136592 AB014567	-45194	+	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	58208	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	125708	-	TSC_hg19_v1_chr3_-_13057189 BC071805	173818	-	BC011514|RPL32|6161|ribosomal protein L32##BC070209|RPL32|6161|ribosomal protein L32##X03342|RPL32|6161|ribosomal protein L32##D28385|RPL32|6161|ribosomal protein L32##AK311909|RPL32|6161|ribosomal protein L32##NM_000994|RPL32|6161|ribosomal protein L32##NM_001007073|RPL32|6161|ribosomal protein L32##NM_001007074|RPL32|6161|ribosomal protein L32##GU727621|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_001162499|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_012298|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##BC136592|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##AB014567|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1##AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1	0.0	
chr4	41074098	41074201	reg1022567.p1	5.381	+	BC088372 TSC_hg19_v1_chr4_-_40936716	-137471	-	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-214974	-	BC042401 NM_024677 BC036568 AK024063	-322203	+	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	142420	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	184747	+	TSC_hg19_v1_chr4_+_41258913 BC000332 BC018838	184769	+	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.0	
chr5	10607929	10608099	reg1023871.p3	5.381	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-43572	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-165862	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-166011	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	153245	-	TSC_hg19_v1_chr5_-_10761341 BC002726	153328	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	153385	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.0	
chr8	97247005	97247106	reg1022002.p1	5.381	+	BC127948 BC127947 AJ537424 NM_001001557	-74074	-	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	-965590	-	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	-966004	+	CR542176 CR542196 TSC_hg19_v1_chr8_-_97247774 AK307085 NM_001199975 BC041005 AK295007 AK311756 M22348 X13585 M26700 BC005230 NM_006294	754	-	BC012995 NM_015942 TSC_hg19_v1_chr8_-_97273837 AK309002	26762	-	TSC_hg19_v1_chr8_+_97274125 AK293036	27063	+	BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6##BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_001199975|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC012995|MTERFD1|51001|MTERF domain containing 1##NM_015942|MTERFD1|51001|MTERF domain containing 1##AK309002|MTERFD1|51001|MTERF domain containing 1##AK293036|PTDSS1|9791|phosphatidylserine synthase 1	0.959566	CTCF.p2:-4:0.960
chr14	89774705	89774886	reg1027124.p1	5.380	+	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-483802	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-515585	-	NM_207662 BC027607 AF474376	-714042	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	103981	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	108615	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	310800	-	AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3	0.0	
chr15	76935179	76935360	reg1023338.p1	5.379	+	TSC_hg19_v1_chr15_+_76629141 AB593133 AK001022 BC012136 NM_145805 BC011967 EU446846	-306107	+	TSC_hg19_v1_chr15_-_76603808 AK292979 NM_000126 NM_001127716	-331455	-	TSC_hg19_v1_chr15_-_76603791 BC029995	-331472	-	BX647285 NM_001145923	219015	-	AF242528 NM_020843	240934	-	TSC_hg19_v1_chr15_-_77197682 BC070197 BC107415 AK056515	262395	-	AB593133|ISL2|64843|ISL LIM homeobox 2##AK001022|ISL2|64843|ISL LIM homeobox 2##BC012136|ISL2|64843|ISL LIM homeobox 2##NM_145805|ISL2|64843|ISL LIM homeobox 2##BC011967|ISL2|64843|ISL LIM homeobox 2##EU446846|ISL2|64843|ISL LIM homeobox 2##AK292979|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##NM_000126|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##NM_001127716|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC029995|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER##NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AF242528|SCAPER|49855|S-phase cyclin A-associated protein in the ER##NM_020843|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC070197|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC107415|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056515|SCAPER|49855|S-phase cyclin A-associated protein in the ER	0.996017	CTCF.p2:-49:0.996
chr20	32657184	32657302	reg1010730.p1	5.379	+	AK291079 TSC_hg19_v1_chr20_+_32581883 AK291054	-75360	+	TSC_hg19_v1_chr20_+_32581743 AF148457 AK222915 L38696 BC105018	-75448	+	TSC_hg19_v1_chr20_+_32581716 BC103753 AK299766	-75539	+	AB451237 AB451362 BT009795 CR456734 CU674464 AB590122 TSC_hg19_v1_chr20_-_32700021 AB208966 M29536 BC107588 BC000934 AK313025 BC000461	42753	-	TSC_hg19_v1_chr20_-_32700082 NM_003908	42842	-	NM_001672 BC104238 BC104239	190931	+	AK291079|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK291054|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AF148457|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK222915|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##L38696|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC105018|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC103753|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK299766|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AB451237|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB451362|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BT009795|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##CR456734|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB208966|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##M29536|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC107588|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000934|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AK313025|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000461|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##NM_003908|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##NM_001672|ASIP|434|agouti signaling protein##BC104238|ASIP|434|agouti signaling protein##BC104239|ASIP|434|agouti signaling protein	0.823219	CTCF.p2:4:0.823
chr4	111208391	111208571	reg1024701.p1	5.379	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	-88696	-	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-374434	+	AK126648 NM_198506	-435996	+	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	188892	+	AK313987 TSC_hg19_v1_chr4_-_111543909	335429	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	335794	-	BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK126648|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_198506|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313987|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2	0.0	
chr10	47627474	47627582	reg1026979.p1	5.378	+	BC171820 BC171845 BC171847 NM_001190810	-413903	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	-445844	-	AB590156 CU687256 DQ893430 DQ896775 M81844 AK296573 AK300139 AK300158 BC021910 BC004376 NM_001098845 AK296976 Z36830 BC073755 NM_001040084 AK298761	-453509	-	NM_001630 BC008813 BC073755 AK096715 AK313626 X16662 BC029890 AK300191 AK223149 AK307182 CU679125 CU687256	119487	+	NM_018232	266494	+	BC171820 BC171845 BC171847 NM_001190810	588195	+	BC171845|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171847|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##NM_001190810|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##DQ893430|ANXA8L2|244|annexin A8-like 2##DQ896775|ANXA8|653145|annexin A8##M81844|ANXA8|653145|annexin A8##AK296573|ANXA8|653145|annexin A8##AK300139|ANXA8|653145|annexin A8##AK300158|ANXA8|653145|annexin A8##BC004376|ANXA8|653145|annexin A8##NM_001098845|ANXA8L1|728113|annexin A8-like 1##Z36830|ANXA8|653145|annexin A8##BC073755|ANXA8|653145|annexin A8##NM_001040084|ANXA8|653145|annexin A8##AK298761|ANXA8|653145|annexin A8##NM_001630|ANXA8L2|244|annexin A8-like 2##BC008813|ANXA8L2|244|annexin A8-like 2##BC073755|ANXA8|653145|annexin A8##AK313626|ANXA8L2|244|annexin A8-like 2##X16662|ANXA8L2|244|annexin A8-like 2##AK300191|ANXA8L2|244|annexin A8-like 2##AK223149|ANXA8L2|244|annexin A8-like 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##BC171845|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171847|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##NM_001190810|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9	0.993556	CTCF.p2:-15:0.994
chr1	234904134	234904314	reg1027107.p2	5.378	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-8450	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-158978	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-160366	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	387865	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	388007	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	420339	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.011685	
chr17	76113571	76113701	reg1025692.p1	5.378	+	BC039479 NM_001142640 NM_018996	-113354	+	TSC_hg19_v1_chr17_+_75543021 AK096234	-570616	+	AK056495 NM_001113495	-642312	+	TSC_hg19_v1_chr17_-_76124768 AK074065	11136	-	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	11202	-	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	13230	+	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK074065|TMC6|11322|transmembrane channel-like 6##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8	0.987604	CTCF.p2:10:0.974
chr19	45311310	45311432	reg1023760.p2	5.378	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	-30215	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	-59390	+	BC144608 NM_001039213	-108951	+	TSC_hg19_v1_chr19_+_45312359 BC014065 NM_001013257 NM_005581 X83425 BC036745 X80026 BC050450 AB463427 CU690688 HE572749	985	+	NM_001042724 NM_002856 TSC_hg19_v1_chr19_+_45349482	38071	+	TSC_hg19_v1_chr19_+_45349564 AK291330	38192	+	AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_001042724|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##NM_002856|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##AK291330|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)	0.907596	CTCF.p2:9:0.908
chr3	17844684	17844864	reg1026379.p1	5.378	+	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-60607	-	D86965 NM_014744	-62376	-	AK310539 NM_001134381	-103263	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	622023	-	BC001744 NM_001131010	635459	-	AK295633 AY053503 NM_144633 AB209053 AK309034	1345230	+	NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	0.0	
chrY	4859932	4860069	reg1026746.p1	5.378	+	AK292609 AF332223 NM_139214 BC101143 BC101146 BC128604 AB464726	-1412817	+	TSC_hg19_v1_chrY_+_2803421 AK301061 NM_001145275 NM_003411	-2056537	+	AK310553 NM_001145276	-2056889	+	AJ276803 AJ564948 NM_032971 TSC_hg19_v1_chrY_+_4868336 AF277053 AK289676	8353	+	AJ564959 AF332216 AF332217 NM_032972 NM_032973	64129	+	NM_022573 AB464293 AY130858 AK307425 M98525	1254311	+	AK292609|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked##AF332223|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked##NM_139214|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked##BC101143|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked##BC101146|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked##BC128604|TGIF2LY|90655|TGFB-induced factor homeobox 2-like, Y-linked##AK301061|ZFY|7544|zinc finger protein, Y-linked##NM_001145275|ZFY|7544|zinc finger protein, Y-linked##NM_003411|ZFY|7544|zinc finger protein, Y-linked##AK310553|ZFY|7544|zinc finger protein, Y-linked##NM_001145276|ZFY|7544|zinc finger protein, Y-linked##AJ276803|PCDH11Y|83259|protocadherin 11 Y-linked##AJ564948|PCDH11Y|83259|protocadherin 11 Y-linked##NM_032971|PCDH11Y|83259|protocadherin 11 Y-linked##AF277053|PCDH11Y|83259|protocadherin 11 Y-linked##AK289676|PCDH11Y|83259|protocadherin 11 Y-linked##AJ564959|PCDH11X|27328|protocadherin 11 X-linked##AF332216|PCDH11Y|83259|protocadherin 11 Y-linked##AF332217|PCDH11Y|83259|protocadherin 11 Y-linked##NM_032972|PCDH11Y|83259|protocadherin 11 Y-linked##NM_032973|PCDH11Y|83259|protocadherin 11 Y-linked##NM_022573|TSPY2|64591|testis specific protein, Y-linked 2##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##AK307425|TSPY2|64591|testis specific protein, Y-linked 2##M98525|TSPY1|7258|testis specific protein, Y-linked 1	0.979299	CTCF.p2:-17:0.979
chr1	1656072	1656183	reg1023622.p2	5.377	+	TSC_hg19_v1_chr1_-_1655767 AK303446 AF067518 AF067519 AF067520 AF067521 AF067522 AF067523 AK301495 AK304679 BC009375 AF067512 AF067513 AF067514 AF067515 AF067516 AF067517 AK303451 NM_033486 NM_033487 NM_033488 NM_033489 NM_033492 NM_033493 U04816 U04817 U04818 U04824 U07704 U07705 NM_024011 NM_033529	-351	-	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	-31910	-	BC092507 TSC_hg19_v1_chr1_-_1624149 AK125619	-31969	-	AL049665 NM_001199787 NM_182838 TSC_hg19_v1_chr1_-_1677454 BC110653	21334	-	AK296722 NM_001198995	33953	-	TSC_hg19_v1_chr1_-_1709864 AK291728 AK290161 AK023114 NM_023018	53759	-	AK303446|CDK11B|984|cyclin-dependent kinase 11B##AF067518|CDK11A|728642|cyclin-dependent kinase 11A##AF067519|CDK11A|728642|cyclin-dependent kinase 11A##AF067520|CDK11A|728642|cyclin-dependent kinase 11A##AF067521|CDK11A|728642|cyclin-dependent kinase 11A##AF067522|CDK11A|728642|cyclin-dependent kinase 11A##AF067523|CDK11A|728642|cyclin-dependent kinase 11A##AK301495|CDK11B|984|cyclin-dependent kinase 11B##AK304679|CDK11B|984|cyclin-dependent kinase 11B##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AF067512|CDK11B|984|cyclin-dependent kinase 11B##AF067513|CDK11B|984|cyclin-dependent kinase 11B##AF067514|CDK11B|984|cyclin-dependent kinase 11B##AF067515|CDK11B|984|cyclin-dependent kinase 11B##AF067516|CDK11B|984|cyclin-dependent kinase 11B##AF067517|CDK11B|984|cyclin-dependent kinase 11B##AK303451|CDK11B|984|cyclin-dependent kinase 11B##NM_033486|CDK11B|984|cyclin-dependent kinase 11B##NM_033487|CDK11B|984|cyclin-dependent kinase 11B##NM_033488|CDK11B|984|cyclin-dependent kinase 11B##NM_033489|CDK11B|984|cyclin-dependent kinase 11B##NM_033492|CDK11B|984|cyclin-dependent kinase 11B##NM_033493|CDK11B|984|cyclin-dependent kinase 11B##U04816|CDK11B|984|cyclin-dependent kinase 11B##U04817|CDK11B|984|cyclin-dependent kinase 11B##U04818|CDK11B|984|cyclin-dependent kinase 11B##U04824|CDK11B|984|cyclin-dependent kinase 11B##U07704|CDK11A|728642|cyclin-dependent kinase 11A##U07705|CDK11A|728642|cyclin-dependent kinase 11A##NM_024011|CDK11A|728642|cyclin-dependent kinase 11A##NM_033529|CDK11A|728642|cyclin-dependent kinase 11A##AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B##BC092507|SLC35E2B|728661|solute carrier family 35, member E2B##AK125619|SLC35E2B|728661|solute carrier family 35, member E2B##AL049665|SLC35E2|9906|solute carrier family 35, member E2##NM_001199787|SLC35E2|9906|solute carrier family 35, member E2##NM_182838|SLC35E2|9906|solute carrier family 35, member E2##BC110653|SLC35E2B|728661|solute carrier family 35, member E2B##AK296722|NADK|65220|NAD kinase##NM_001198995|NADK|65220|NAD kinase##AK291728|NADK|65220|NAD kinase##AK290161|NADK|65220|NAD kinase##AK023114|NADK|65220|NAD kinase##NM_023018|NADK|65220|NAD kinase	0.039695	
chr17	43312164	43312277	reg1025052.p1	5.377	+	TSC_hg19_v1_chr17_+_43299284 AY278319 NM_005892 BC111564	-12860	+	AK056946 NM_144608	-73957	+	TSC_hg19_v1_chr17_+_43225936 BC006460	-86285	+	AK096807 TSC_hg19_v1_chr17_-_43319268	6976	-	TSC_hg19_v1_chr17_+_43325300 AK311429	13084	+	BC028124 AF433663 AK302184 AK058143 NM_152343	27235	-	AY278319|FMNL1|752|formin-like 1##NM_005892|FMNL1|752|formin-like 1##BC111564|FMNL1|752|formin-like 1##AK056946|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##NM_144608|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##BC006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK311429|LOC100133991|100133991|uncharacterized LOC100133991##BC028124|C17orf46|124783|chromosome 17 open reading frame 46##AF433663|C17orf46|124783|chromosome 17 open reading frame 46##AK302184|C17orf46|124783|chromosome 17 open reading frame 46##AK058143|C17orf46|124783|chromosome 17 open reading frame 46##NM_152343|C17orf46|124783|chromosome 17 open reading frame 46	0.073201	
chr18	67512973	67513098	reg1026434.p1	5.377	+	TSC_hg19_v1_chr18_+_67068214 NM_152721 AY599248 BC096744	-444805	+	NM_024781 CR749520	-1047693	+	NM_001093729 AK308114 AK091108	-1130516	+	AK313199 TSC_hg19_v1_chr18_-_67615110	102064	-	GU935335 GU935336 U56102 NM_006566	111160	-	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	359903	-	NM_152721|DOK6|220164|docking protein 6##AY599248|DOK6|220164|docking protein 6##BC096744|DOK6|220164|docking protein 6##NM_024781|CCDC102B|79839|coiled-coil domain containing 102B##CR749520|CCDC102B|79839|coiled-coil domain containing 102B##NM_001093729|CCDC102B|79839|coiled-coil domain containing 102B##AK308114|CCDC102B|79839|coiled-coil domain containing 102B##AK091108|CCDC102B|79839|coiled-coil domain containing 102B##AK313199|CD226|10666|CD226 molecule##GU935335|CD226|10666|CD226 molecule##GU935336|CD226|10666|CD226 molecule##U56102|CD226|10666|CD226 molecule##NM_006566|CD226|10666|CD226 molecule##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin	0.013655	
chr6	114417854	114417971	reg1025174.p1	5.377	+	AF503292 NM_153612 BC093911 BC093913	-33888	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-125576	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	-125640	-	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	1963970	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	2004097	+	AK097758 TSC_hg19_v1_chr6_-_116422450	2004518	-	AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	0.940119	CTCF.p2:8:0.940
chr9	131769160	131769295	reg1026795.p1	5.377	+	TSC_hg19_v1_chr9_+_131709992 BX537774 D79991	-59216	+	TSC_hg19_v1_chr9_+_131709977 NM_015354	-59247	+	TSC_hg19_v1_chr9_-_131709833 AK300180 BC035556 AY358759 AK225402 AB029017 NM_014908	-59330	-	EU832345 EU832430 TSC_hg19_v1_chr9_-_131790591 AF257319 AF258589 AB058751 BC014635 NM_020145	21305	-	TSC_hg19_v1_chr9_+_131798900 AK074127 AK075421 AK301241	29703	+	AK303036 BC009114 NM_032809	30005	+	BX537774|NUP188|23511|nucleoporin 188kDa##D79991|NUP188|23511|nucleoporin 188kDa##NM_015354|NUP188|23511|nucleoporin 188kDa##AK300180|DOLK|22845|dolichol kinase##BC035556|DOLK|22845|dolichol kinase##AY358759|DOLK|22845|dolichol kinase##AB029017|DOLK|22845|dolichol kinase##NM_014908|DOLK|22845|dolichol kinase##EU832345|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##EU832430|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##AF257319|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##AF258589|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##AB058751|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##BC014635|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##NM_020145|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##AK074127|FAM73B|84895|family with sequence similarity 73, member B##AK075421|FAM73B|84895|family with sequence similarity 73, member B##AK301241|FAM73B|84895|family with sequence similarity 73, member B##AK303036|FAM73B|84895|family with sequence similarity 73, member B##BC009114|FAM73B|84895|family with sequence similarity 73, member B##NM_032809|FAM73B|84895|family with sequence similarity 73, member B	0.969953	CTCF.p2:42:0.874
chr12	48152883	48153020	reg1026577.p1	5.376	+	AK092448 NM_001098531	-77	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	-542	-	AK314688 BC069715 BC069698 BC074763 AX772808 AK300169 AK075446 BC111782 M32402 M36109 NM_001172439 NM_001172440 NM_006025	-33662	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	14083	+	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	60713	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	145850	-	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK314688|ENDOU|8909|endonuclease, polyU-specific##BC069715|ENDOU|8909|endonuclease, polyU-specific##BC069698|ENDOU|8909|endonuclease, polyU-specific##BC074763|ENDOU|8909|endonuclease, polyU-specific##AX772808|ENDOU|8909|endonuclease, polyU-specific##AK300169|ENDOU|8909|endonuclease, polyU-specific##AK075446|ENDOU|8909|endonuclease, polyU-specific##BC111782|ENDOU|8909|endonuclease, polyU-specific##M32402|ENDOU|8909|endonuclease, polyU-specific##M36109|ENDOU|8909|endonuclease, polyU-specific##NM_001172439|ENDOU|8909|endonuclease, polyU-specific##NM_001172440|ENDOU|8909|endonuclease, polyU-specific##NM_006025|ENDOU|8909|endonuclease, polyU-specific##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor	0.046059	
chr13	31028063	31028199	reg1021207.p2	5.376	+	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-146562	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	-146980	-	TSC_hg19_v1_chr13_-_30424811 NM_007106	-603290	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	11862	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	11927	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	163496	-	AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##NM_007106|UBL3|5412|ubiquitin-like 3##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1	0.951512	CTCF.p2:39:0.952
chr13	91519664	91519798	reg1025141.p2	5.376	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3194862	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5146292	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7063231	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	531173	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	2359696	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3612095	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.844376	CTCF.p2:-9:0.844
chr3	66304607	66304723	reg1024739.p2	5.376	+	NM_001164796	-33498	+	AK092495 AX747571 NM_173471	-185381	+	BC062367 NM_001033057 NM_004742 NM_015520 TSC_hg19_v1_chr3_-_66024518	-280152	-	TSC_hg19_v1_chr3_+_66444897 AB075504	140294	+	AF381545 BC140907 NM_015541 AY730707	246187	-	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	246799	-	NM_001164796|SLC25A26|115286|solute carrier family 25, member 26##AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1	0.80544	CTCF.p2:-20:0.805
chr4	124320631	124320761	reg1016178.p5	5.376	+	AK026960 BC063856 NM_005841	-23	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-2740	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-476444	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	1313118	-	NM_024582	1916870	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	4233443	+	AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	0.015736	
chr4	17764457	17764563	reg1025210.p1	5.376	+	TSC_hg19_v1_chr4_+_17616263 AF318059 AK313928 AF358829 NM_025205 BC011936 AF317680 DQ893391 DQ896713 AF317679 AF317678	-148244	+	TSC_hg19_v1_chr4_+_17579121 AK298613 AK307723 AK225511 BC006199 AK298790	-185380	+	TSC_hg19_v1_chr4_+_17579057 BC065564 CR457128 AK022055	-185434	+	AK308144 NM_015688	18624	-	BC050697 TSC_hg19_v1_chr4_-_17806917	42358	-	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	47763	-	AF318059|MED28|80306|mediator complex subunit 28##AK313928|MED28|80306|mediator complex subunit 28##AF358829|MED28|80306|mediator complex subunit 28##NM_025205|MED28|80306|mediator complex subunit 28##BC011936|MED28|80306|mediator complex subunit 28##AF317680|MED28|80306|mediator complex subunit 28##DQ893391|MED28|80306|mediator complex subunit 28##DQ896713|MED28|80306|mediator complex subunit 28##AF317679|MED28|80306|mediator complex subunit 28##AF317678|MED28|80306|mediator complex subunit 28##AK298613|LAP3|51056|leucine aminopeptidase 3##AK307723|LAP3|51056|leucine aminopeptidase 3##AK225511|LAP3|51056|leucine aminopeptidase 3##BC006199|LAP3|51056|leucine aminopeptidase 3##AK298790|LAP3|51056|leucine aminopeptidase 3##BC065564|LAP3|51056|leucine aminopeptidase 3##CR457128|LAP3|51056|leucine aminopeptidase 3##AK022055|LAP3|51056|leucine aminopeptidase 3##AK308144|FAM184B|27146|family with sequence similarity 184, member B##NM_015688|FAM184B|27146|family with sequence similarity 184, member B##BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16	0.192945	
chrY	59361352	59361481	reg1022492.p1	5.376	+	M84747 NM_002186 AK303178 BC025298 BC051337 S71404 CU690808	-31069	+	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	-147419	+	AK289543 AK311508 NM_005840 AK125483	-260976	+	None	None	None	None	None	None	None	None	None	M84747|IL9R|3581|interleukin 9 receptor##NM_002186|IL9R|3581|interleukin 9 receptor##AK303178|IL9R|3581|interleukin 9 receptor##BC025298|IL9R|3581|interleukin 9 receptor##BC051337|IL9R|3581|interleukin 9 receptor##S71404|IL9R|3581|interleukin 9 receptor##NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7##AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)	2.060603	CTCF.p2:22:0.980	CTCF.p2:80:1.000
chr10	125974469	125974649	reg1020324.p1	5.375	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	-121406	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-122660	-	BC137492 BC146862 AY358565 NM_198148	-323063	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	132914	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	132959	-	NM_001146340 TSC_hg19_v1_chr10_-_126138606	164018	-	BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##NM_001146340|NKX1-2|390010|NK1 homeobox 2	0.0	
chr1	206912439	206912578	reg1026648.p1	5.375	+	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-54037	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-103398	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	-103664	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	33371	-	AY040367 NM_153758 AB463800	59718	+	AF453946 NM_013371	89713	+	BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19	0.299377	CTCF.p2:-16:0.299
chr17	1957930	1958053	reg1001342.p3	5.375	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-12683	+	TSC_hg19_v1_chr17_+_1933446 S81752 U34880 AF321876 NM_001383 AK314015 BC096086 BC096087 BC096088 BC096089 BC003099	-24570	+	BC128608 NM_178568	-29814	-	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	407	+	DQ187313 NM_001098202	1566	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	248821	-	NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##S81752|DPH1|1801|DPH1 homolog (S. cerevisiae)##U34880|DPH1|1801|DPH1 homolog (S. cerevisiae)##AF321876|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_001383|DPH1|1801|DPH1 homolog (S. cerevisiae)##AK314015|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096086|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096087|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096088|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096089|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC003099|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC128608|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_178568|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.0	
chr8	26486091	26486223	reg1023663.p1	5.375	+	NM_001244604 TSC_hg19_v1_chr8_+_26435921 AK299077	-50230	+	TSC_hg19_v1_chr8_+_26435604 U17279 AB370194 AB590733 BT006944 CU691152	-50477	+	TSC_hg19_v1_chr8_+_26435468 AK223557 BC056408 D78013 BC010880 AK291287	-50630	+	U02569 AY491775 AY491776 AY491777 AY491778 AY491779 AY491780 AY491781 D25235 D32201 D32202 NM_000680 NM_033302 NM_033303 NM_033304	236761	-	AK311558 TSC_hg19_v1_chr8_-_26724735	238577	-	TSC_hg19_v1_chr8_-_26724764 AK289548	238601	-	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2##AK299077|DPYSL2|1808|dihydropyrimidinase-like 2##U17279|DPYSL2|1808|dihydropyrimidinase-like 2##AB370194|DPYSL2|1808|dihydropyrimidinase-like 2##AK223557|DPYSL2|1808|dihydropyrimidinase-like 2##BC056408|DPYSL2|1808|dihydropyrimidinase-like 2##D78013|DPYSL2|1808|dihydropyrimidinase-like 2##AK291287|DPYSL2|1808|dihydropyrimidinase-like 2##U02569|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491775|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491776|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491777|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491778|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491780|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491781|ADRA1A|148|adrenergic, alpha-1A-, receptor##D25235|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32201|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32202|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_000680|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033302|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033303|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033304|ADRA1A|148|adrenergic, alpha-1A-, receptor##AK289548|ADRA1A|148|adrenergic, alpha-1A-, receptor	0.0	
chr8	38614298	38614409	reg1021200.p1	5.375	+	BX647696 NM_001146216	-28650	+	BC137511 BC137512 BC139744 AK125570 NM_207412	-228177	-	FJ809916 FJ809917 NM_001174063 NM_001174064 NM_015850 NM_023105 NM_023106 NM_023110	-288002	-	AY072874 AY072875 TSC_hg19_v1_chr8_+_38614814 AK308849	433	+	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	30369	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	30415	+	BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1##BC137511|C8orf86|389649|chromosome 8 open reading frame 86##BC137512|C8orf86|389649|chromosome 8 open reading frame 86##BC139744|C8orf86|389649|chromosome 8 open reading frame 86##AK125570|C8orf86|389649|chromosome 8 open reading frame 86##NM_207412|C8orf86|389649|chromosome 8 open reading frame 86##FJ809916|FGFR1|2260|fibroblast growth factor receptor 1##FJ809917|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174063|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174064|FGFR1|2260|fibroblast growth factor receptor 1##NM_015850|FGFR1|2260|fibroblast growth factor receptor 1##NM_023105|FGFR1|2260|fibroblast growth factor receptor 1##NM_023106|FGFR1|2260|fibroblast growth factor receptor 1##NM_023110|FGFR1|2260|fibroblast growth factor receptor 1##AY072874|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072875|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK308849|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1	0.059969	
chr12	125398565	125398711	reg1025463.p1	5.374	+	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	-50165	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	-50261	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	-50333	-	AY732488 AY819759 BC008955 BC080583 AB209782 BC000449 AK056939 AK098827 AK129749 AK291539 BC039193 BC093445 AB009010 TSC_hg19_v1_chr12_-_125399197 AK026846	535	-	NM_021009	948	-	TSC_hg19_v1_chr12_-_125473644 BC037964 NM_032656	75006	-	NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AY732488|UBC|7316|ubiquitin C##AY819759|UBC|7316|ubiquitin C##BC008955|UBC|7316|ubiquitin C##BC080583|UBC|7316|ubiquitin C##AB209782|UBC|7316|ubiquitin C##BC000449|UBC|7316|ubiquitin C##AK056939|UBC|7316|ubiquitin C##AK098827|UBC|7316|ubiquitin C##AK129749|UBC|7316|ubiquitin C##AK291539|UBC|7316|ubiquitin C##BC039193|UBC|7316|ubiquitin C##BC093445|UBC|7316|ubiquitin C##AB009010|UBC|7316|ubiquitin C##AK026846|UBC|7316|ubiquitin C##NM_021009|UBC|7316|ubiquitin C##BC037964|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37##NM_032656|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37	0.471458	CTCF.p2:7:0.471
chr17	8085368	8085493	reg1025361.p1	5.374	+	CU687070 BC006292 TSC_hg19_v1_chr17_-_8079699 AK127891 AK315666 AK027813 BC119730 BC119731 BC127649 BC127650 AY358525 BC070231 NM_032354 NM_183065	-5770	-	TSC_hg19_v1_chr17_-_8066267 BC002737 AK289555 BC019608 BC033870 AK225777 NM_014232	-19138	-	AL050223 TSC_hg19_v1_chr17_-_8064059	-21428	-	BC009261 AK000021 AK222506 TSC_hg19_v1_chr17_-_8093462 BC018880 BC070272	7974	-	TSC_hg19_v1_chr17_-_8093499 NM_017622	8097	-	BC009751 AB011446 BC080581 AB011450 AF004022 AF015254 BC000442 NM_004217 TSC_hg19_v1_chr17_-_8113894 AK314889 AK297976 BC013300	28453	-	BC006292|TMEM107|84314|transmembrane protein 107##AK315666|TMEM107|84314|transmembrane protein 107##AK027813|TMEM107|84314|transmembrane protein 107##BC119730|TMEM107|84314|transmembrane protein 107##BC119731|TMEM107|84314|transmembrane protein 107##BC127649|TMEM107|84314|transmembrane protein 107##BC127650|TMEM107|84314|transmembrane protein 107##AY358525|TMEM107|84314|transmembrane protein 107##BC070231|TMEM107|84314|transmembrane protein 107##NM_032354|TMEM107|84314|transmembrane protein 107##NM_183065|TMEM107|84314|transmembrane protein 107##BC002737|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##AK289555|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##BC019608|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##BC033870|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##AK225777|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##NM_014232|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##AL050223|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##BC009261|C17orf59|54785|chromosome 17 open reading frame 59##AK000021|C17orf59|54785|chromosome 17 open reading frame 59##AK222506|C17orf59|54785|chromosome 17 open reading frame 59##BC018880|C17orf59|54785|chromosome 17 open reading frame 59##BC070272|C17orf59|54785|chromosome 17 open reading frame 59##NM_017622|C17orf59|54785|chromosome 17 open reading frame 59##BC009751|AURKB|9212|aurora kinase B##AB011446|AURKB|9212|aurora kinase B##BC080581|AURKB|9212|aurora kinase B##AB011450|AURKB|9212|aurora kinase B##AF004022|AURKB|9212|aurora kinase B##AF015254|AURKB|9212|aurora kinase B##BC000442|AURKB|9212|aurora kinase B##NM_004217|AURKB|9212|aurora kinase B##AK314889|AURKB|9212|aurora kinase B##AK297976|AURKB|9212|aurora kinase B##BC013300|AURKB|9212|aurora kinase B	0.0	
chr18	28469941	28470106	reg1026514.p1	5.374	+	TSC_hg19_v1_chr18_-_25757363 NM_001792	-2712626	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	-2712986	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-3704790	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	152679	-	CR749226 TSC_hg19_v1_chr18_-_28681542	211465	-	TSC_hg19_v1_chr18_-_28682275 EF017811 EF017812 X56807 AK297029 AK290313 BX648425 BC063291 NM_004949 NM_024422	212168	-	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3##CR749226|DSC2|1824|desmocollin 2##EF017811|DSC2|1824|desmocollin 2##EF017812|DSC2|1824|desmocollin 2##X56807|DSC2|1824|desmocollin 2##AK297029|DSC2|1824|desmocollin 2##AK290313|DSC2|1824|desmocollin 2##BX648425|DSC2|1824|desmocollin 2##BC063291|DSC2|1824|desmocollin 2##NM_004949|DSC2|1824|desmocollin 2##NM_024422|DSC2|1824|desmocollin 2	0.54627	CTCF.p2:24:0.546
chr7	128503668	128503796	reg1025620.p2	5.374	+	TSC_hg19_v1_chr7_+_128502927 CR456896	-790	+	NM_001198909 NM_004231 BC107854 TSC_hg19_v1_chr7_+_128502909 BC104230 BC104231 D49400 AK312214	-842	+	AB371585 AF146692 NM_001127487 NM_001458	-33260	+	NM_001195150	2731	+	TSC_hg19_v1_chr7_-_128543406 AK095464	39669	-	TSC_hg19_v1_chr7_-_128550763 AK122706 NM_001135914 NM_199349	47034	-	CR456896|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##NM_001198909|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##NM_004231|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC107854|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC104230|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC104231|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##D49400|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##AK312214|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##AB371585|FLNC|2318|filamin C, gamma##AF146692|FLNC|2318|filamin C, gamma##NM_001127487|FLNC|2318|filamin C, gamma##NM_001458|FLNC|2318|filamin C, gamma##NM_001195150|LOC100130705|100130705|uncharacterized LOC100130705##AK095464|KCP|375616|kielin/chordin-like protein##AK122706|KCP|375616|kielin/chordin-like protein##NM_001135914|KCP|375616|kielin/chordin-like protein##NM_199349|KCP|375616|kielin/chordin-like protein	0.0	
chr14	32938730	32938859	reg1025878.p1	5.373	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-140258	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-392288	+	TSC_hg19_v1_chr14_+_32546223 BC075799	-392549	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	469696	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	1481355	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	1992693	-	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A	0.856085	CTCF.p2:17:0.856
chr2	31913547	31913663	reg1025912.p2	5.373	+	EU832809 GQ129244 HQ258121 M74047 EF560740 AK316597 BC112252 BC113641 NM_000348	-107602	-	TSC_hg19_v1_chr2_-_31637599 NM_000379	-275994	-	TSC_hg19_v1_chr2_-_31637569 U39487 D11456 U06117	-276034	-	TSC_hg19_v1_chr2_-_32235713 AF363446 BC018733 NM_001137602 NM_015955	322053	-	TSC_hg19_v1_chr2_-_32235732 AB041018	322123	-	TSC_hg19_v1_chr2_-_32235815 BC070046	322217	-	EU832809|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##GQ129244|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##HQ258121|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##M74047|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##EF560740|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##AK316597|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC112252|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC113641|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000348|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000379|XDH|7498|xanthine dehydrogenase##U39487|XDH|7498|xanthine dehydrogenase##D11456|XDH|7498|xanthine dehydrogenase##U06117|XDH|7498|xanthine dehydrogenase##AF363446|MEMO1|51072|mediator of cell motility 1##BC018733|MEMO1|51072|mediator of cell motility 1##NM_001137602|MEMO1|51072|mediator of cell motility 1##NM_015955|MEMO1|51072|mediator of cell motility 1##AB041018|MEMO1|51072|mediator of cell motility 1##BC070046|MEMO1|51072|mediator of cell motility 1	0.940771	CTCF.p2:-17:0.941
chr7	135306131	135306311	reg1027439.p2	5.373	+	TSC_hg19_v1_chr7_+_135242675 NM_015135 BC136624 AK297307 BC146784 D86978	-63533	+	BC035590 U71267 U71268 AL389980 TSC_hg19_v1_chr7_-_135194851 AK314540 AK074493 AK300365 NM_001008225 NM_001190847 NM_001190848 NM_001190849 NM_001190850 NM_013316	-111361	-	AB464251 AF513502 NM_182489	-389491	+	TSC_hg19_v1_chr7_+_135347230 NM_001130929 BC063529 BC073942 BC021734 BC107765 BC047474 BC016741 BC040872	41040	+	AF169301 NM_012450 BC030689 TSC_hg19_v1_chr7_-_135412940 AB208809	106715	-	BC137311 BC137312 AK297754 AY358803 AK290250 AK310180 NM_205855	127258	-	NM_015135|NUP205|23165|nucleoporin 205kDa##BC136624|NUP205|23165|nucleoporin 205kDa##AK297307|NUP205|23165|nucleoporin 205kDa##BC146784|NUP205|23165|nucleoporin 205kDa##D86978|NUP205|23165|nucleoporin 205kDa##BC035590|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71267|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71268|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AL389980|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK314540|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK074493|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK300365|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001008225|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190847|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190848|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190849|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190850|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_013316|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AB464251|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AF513502|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##NM_182489|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##NM_001130929|C7orf73|647087|chromosome 7 open reading frame 73##BC063529|C7orf73|647087|chromosome 7 open reading frame 73##BC073942|C7orf73|647087|chromosome 7 open reading frame 73##BC021734|C7orf73|647087|chromosome 7 open reading frame 73##BC107765|C7orf73|647087|chromosome 7 open reading frame 73##BC047474|C7orf73|647087|chromosome 7 open reading frame 73##BC016741|C7orf73|647087|chromosome 7 open reading frame 73##BC040872|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##AF169301|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##NM_012450|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##BC030689|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##AB208809|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##BC137311|FAM180A|389558|family with sequence similarity 180, member A##BC137312|FAM180A|389558|family with sequence similarity 180, member A##AK297754|FAM180A|389558|family with sequence similarity 180, member A##AY358803|FAM180A|389558|family with sequence similarity 180, member A##AK290250|FAM180A|389558|family with sequence similarity 180, member A##AK310180|FAM180A|389558|family with sequence similarity 180, member A##NM_205855|FAM180A|389558|family with sequence similarity 180, member A	0.87047	CTCF.p2:-27:0.870
chr8	31453752	31453841	reg1024055.p1	5.373	+	TSC_hg19_v1_chr8_+_30891325 AF091214	-562505	+	AF195513 AY077841 NM_001015508	-562566	-	NM_000553	-563019	+	NM_013962	43471	+	AK298132 NM_001160002 NM_001160004 NM_001160005 NM_001160007 NM_001160008 NM_004495 NM_013956 NM_013957 NM_013958 NM_013960 NM_013964 M94168 BC006492 TSC_hg19_v1_chr8_+_32405834 M94167 AF026146 AK097005 AK290730 L12261	951993	+	AK289927 NM_013959	1050454	+	AF091214|WRN|7486|Werner syndrome, RecQ helicase-like##AF195513|PURG|29942|purine-rich element binding protein G##AY077841|PURG|29942|purine-rich element binding protein G##NM_001015508|PURG|29942|purine-rich element binding protein G##NM_000553|WRN|7486|Werner syndrome, RecQ helicase-like##NM_013962|NRG1|3084|neuregulin 1##AK298132|NRG1|3084|neuregulin 1##NM_001160002|NRG1|3084|neuregulin 1##NM_001160004|NRG1|3084|neuregulin 1##NM_001160005|NRG1|3084|neuregulin 1##NM_001160007|NRG1|3084|neuregulin 1##NM_001160008|NRG1|3084|neuregulin 1##NM_004495|NRG1|3084|neuregulin 1##NM_013956|NRG1|3084|neuregulin 1##NM_013957|NRG1|3084|neuregulin 1##NM_013958|NRG1|3084|neuregulin 1##NM_013960|NRG1|3084|neuregulin 1##NM_013964|NRG1|3084|neuregulin 1##M94168|NRG1|3084|neuregulin 1##BC006492|NRG1|3084|neuregulin 1##M94167|NRG1|3084|neuregulin 1##AF026146|NRG1|3084|neuregulin 1##AK097005|NRG1|3084|neuregulin 1##AK290730|NRG1|3084|neuregulin 1##L12261|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1	0.08803	
chrX	87868473	87868576	reg1022747.p1	5.373	+	NM_019117 NM_057162 AK056457 AB051474 BC161675 AL832514 AF284765 AF284766 BC140839 BC140840 BC142652 BC146677 AB385497	-1095719	+	AK055953 AK298787 NM_001139515	-2350554	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	-2465059	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	133716	+	BC117398 BC117400 NM_138960 BC101144 BC101145 AF497480 BC029920 AB464725 HQ258115	1308487	+	NM_080832	2821072	+	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)##NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)##AK056457|KLHL4|56062|kelch-like 4 (Drosophila)##AB051474|KLHL4|56062|kelch-like 4 (Drosophila)##BC161675|KLHL4|56062|kelch-like 4 (Drosophila)##AL832514|KLHL4|56062|kelch-like 4 (Drosophila)##AF284765|KLHL4|56062|kelch-like 4 (Drosophila)##AF284766|KLHL4|56062|kelch-like 4 (Drosophila)##BC140839|KLHL4|56062|kelch-like 4 (Drosophila)##BC140840|KLHL4|56062|kelch-like 4 (Drosophila)##BC142652|KLHL4|56062|kelch-like 4 (Drosophila)##BC146677|KLHL4|56062|kelch-like 4 (Drosophila)##AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1##BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_080832|PABPC5|140886|poly(A) binding protein, cytoplasmic 5	0.017864	
chr2	134020610	134020711	reg1027285.p1	5.372	+	AK124659 TSC_hg19_v1_chr2_-_133539761	-480966	-	NM_001077427 AK309668	-591550	-	NM_144586	-592180	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	158694	-	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	305378	-	NM_002410 D17716 AF113921	991225	+	AK124659|NCKAP5|344148|NCK-associated protein 5##NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1##AK309668|LYPD1|116372|LY6/PLAUR domain containing 1##NM_144586|LYPD1|116372|LY6/PLAUR domain containing 1##AK092189|NCKAP5|344148|NCK-associated protein 5##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase	0.780067	CTCF.p2:-6:0.780
chr2	215452149	215452288	reg1013405.p1	5.372	+	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	-175758	+	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	-1303061	+	AK124960 NM_001242575	-1303290	-	AB590656 JF790283 JF790285 JF790287 TSC_hg19_v1_chr2_-_215674408 BC126426 BC126428 AX794378 JF790280 JF790281 JF790282 JF790284 U76638 AK314260 AK301843 JF790286 AK223409 NM_000465	222141	-	AY033486 NM_015657	444591	-	BC144073 AY219711 NM_173076	550891	-	BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451##JF790283|BARD1|580|BRCA1 associated RING domain 1##JF790285|BARD1|580|BRCA1 associated RING domain 1##JF790287|BARD1|580|BRCA1 associated RING domain 1##BC126426|BARD1|580|BRCA1 associated RING domain 1##BC126428|BARD1|580|BRCA1 associated RING domain 1##AX794378|BARD1|580|BRCA1 associated RING domain 1##JF790280|BARD1|580|BRCA1 associated RING domain 1##JF790281|BARD1|580|BRCA1 associated RING domain 1##JF790282|BARD1|580|BRCA1 associated RING domain 1##JF790284|BARD1|580|BRCA1 associated RING domain 1##U76638|BARD1|580|BRCA1 associated RING domain 1##AK314260|BARD1|580|BRCA1 associated RING domain 1##AK301843|BARD1|580|BRCA1 associated RING domain 1##JF790286|BARD1|580|BRCA1 associated RING domain 1##AK223409|BARD1|580|BRCA1 associated RING domain 1##NM_000465|BARD1|580|BRCA1 associated RING domain 1##AY033486|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_015657|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##BC144073|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##AY219711|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_173076|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12	0.0	
chr2	232651039	232651154	reg1025033.p1	5.372	+	TSC_hg19_v1_chr2_+_232646442 AK307486	-4659	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	-5171	-	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	-77764	+	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	20	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	139937	-	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	175264	+	AK307486|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2	0.012766	
chr2	98612789	98612939	reg1023484.p2	5.372	+	TSC_hg19_v1_chr2_-_98612395 AK098792	-461	-	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	-678	-	AK025852 TSC_hg19_v1_chr2_-_98408976	-203942	-	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	90782	+	DQ426863 NM_001079878 NM_001298 DQ067460	349769	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	350041	+	AK098792|TMEM131|23505|transmembrane protein 131##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##AK025852|TMEM131|23505|transmembrane protein 131##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3	0.0	
chr7	32397282	32397414	reg1026207.p2	5.372	+	NM_001191058	-58966	-	AK094180 NM_001191059 U40371 NM_005020	-286337	-	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	-286843	-	TSC_hg19_v1_chr7_-_32529998 AJ238097 AF182291 CU675199 AB463843 BC005938 AK022772 AK024217 NM_012322	132649	-	NM_001130710 NM_001139499	137521	-	TSC_hg19_v1_chr7_+_32535132 AL833560	137747	+	NM_001191058|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AJ238097|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182291|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC005938|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK022772|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK024217|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012322|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001130710|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001139499|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AL833560|AVL9|23080|AVL9 homolog (S. cerevisiase)	0.982458	CTCF.p2:-2:0.982
chr8	22022118	22022226	reg1026842.p2	5.372	+	J03553 NM_001172357 NM_001172410 NM_003018 BC105594 AK315742 BC005913 AK298119 J03517 DQ884411	-2918	+	AF467956 BC142997 TSC_hg19_v1_chr8_-_22014320 BC036494 AJ487961 NM_139278	-7869	-	AY562242 CR457353 AK025930 AF218014 AK302352 TSC_hg19_v1_chr8_-_21999400 BC050622 AK025899 AK172846 BC013048 NM_025232	-22945	-	TSC_hg19_v1_chr8_+_22022649 NM_001199 NM_006129	476	+	TSC_hg19_v1_chr8_+_22022799 AB209590 BC002593 BC009305 BC032105 BC044626 BC142953 AK291620 BC136679 BC144365 BC144366 BC101763 BC101765 BC143338	599	+	TSC_hg19_v1_chr8_+_22022887 M22488 Y08723 Y08724 Y08725 AB527418 U50330	727	+	J03553|SFTPC|6440|surfactant protein C##NM_001172357|SFTPC|6440|surfactant protein C##NM_001172410|SFTPC|6440|surfactant protein C##NM_003018|SFTPC|6440|surfactant protein C##BC105594|SFTPC|6440|surfactant protein C##AK315742|SFTPC|6440|surfactant protein C##BC005913|SFTPC|6440|surfactant protein C##AK298119|SFTPC|6440|surfactant protein C##J03517|SFTPC|6440|surfactant protein C##DQ884411|SFTPC|6440|surfactant protein C##AF467956|LGI3|203190|leucine-rich repeat LGI family, member 3##BC142997|LGI3|203190|leucine-rich repeat LGI family, member 3##BC036494|LGI3|203190|leucine-rich repeat LGI family, member 3##AJ487961|LGI3|203190|leucine-rich repeat LGI family, member 3##NM_139278|LGI3|203190|leucine-rich repeat LGI family, member 3##AY562242|REEP4|80346|receptor accessory protein 4##CR457353|REEP4|80346|receptor accessory protein 4##AK025930|REEP4|80346|receptor accessory protein 4##AF218014|REEP4|80346|receptor accessory protein 4##AK302352|REEP4|80346|receptor accessory protein 4##BC050622|REEP4|80346|receptor accessory protein 4##AK025899|REEP4|80346|receptor accessory protein 4##AK172846|REEP4|80346|receptor accessory protein 4##BC013048|REEP4|80346|receptor accessory protein 4##NM_025232|REEP4|80346|receptor accessory protein 4##NM_001199|BMP1|649|bone morphogenetic protein 1##NM_006129|BMP1|649|bone morphogenetic protein 1##AB209590|BMP1|649|bone morphogenetic protein 1##BC002593|BMP1|649|bone morphogenetic protein 1##BC009305|BMP1|649|bone morphogenetic protein 1##BC032105|BMP1|649|bone morphogenetic protein 1##BC044626|BMP1|649|bone morphogenetic protein 1##BC142953|BMP1|649|bone morphogenetic protein 1##AK291620|BMP1|649|bone morphogenetic protein 1##BC136679|BMP1|649|bone morphogenetic protein 1##BC144365|BMP1|649|bone morphogenetic protein 1##BC144366|BMP1|649|bone morphogenetic protein 1##BC101763|BMP1|649|bone morphogenetic protein 1##BC101765|BMP1|649|bone morphogenetic protein 1##BC143338|BMP1|649|bone morphogenetic protein 1##M22488|BMP1|649|bone morphogenetic protein 1##Y08723|BMP1|649|bone morphogenetic protein 1##Y08724|BMP1|649|bone morphogenetic protein 1##Y08725|BMP1|649|bone morphogenetic protein 1##U50330|BMP1|649|bone morphogenetic protein 1	0.390277	CTCF.p2:8:0.390
chr8	91257287	91257390	reg1025583.p1	5.372	+	AB529128 X06661 BC006478 AK054881 AK312491 BC020864 NM_004929	-162323	-	NM_001359 BC105080 BC105082 BC143669 TSC_hg19_v1_chr8_+_91013704 AK300069 L26050	-243689	+	TSC_hg19_v1_chr8_-_90996896 AK001017 AK289848 BC071590 BC040519 BX640816 NM_002485 AK312410	-260434	-	AK300583 AK123958 AL834364 TSC_hg19_v1_chr8_-_91657856	400460	-	TSC_hg19_v1_chr8_-_91657970 AY147881 NM_001008495 NM_001146273	400677	-	AF414126 TSC_hg19_v1_chr8_+_91803956 NM_022351 AK095533 BC068448 AY224210	546607	+	X06661|CALB1|793|calbindin 1, 28kDa##BC006478|CALB1|793|calbindin 1, 28kDa##AK054881|CALB1|793|calbindin 1, 28kDa##AK312491|CALB1|793|calbindin 1, 28kDa##BC020864|CALB1|793|calbindin 1, 28kDa##NM_004929|CALB1|793|calbindin 1, 28kDa##NM_001359|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105080|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105082|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC143669|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK300069|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##L26050|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK001017|NBN|4683|nibrin##AK289848|NBN|4683|nibrin##BC071590|NBN|4683|nibrin##BC040519|NBN|4683|nibrin##BX640816|NBN|4683|nibrin##NM_002485|NBN|4683|nibrin##AK312410|NBN|4683|nibrin##AK300583|TMEM64|169200|transmembrane protein 64##AK123958|TMEM64|169200|transmembrane protein 64##AL834364|TMEM64|169200|transmembrane protein 64##AY147881|TMEM64|169200|transmembrane protein 64##NM_001008495|TMEM64|169200|transmembrane protein 64##NM_001146273|TMEM64|169200|transmembrane protein 64##AF414126|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##NM_022351|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AK095533|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##BC068448|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AY224210|NECAB1|64168|N-terminal EF-hand calcium binding protein 1	0.266926	CTCF.p2:0:0.267
chr10	25278937	25279074	reg1027511.p1	5.371	+	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	-37473	-	AF480466 NM_020824 TSC_hg19_v1_chr10_-_25012632	-266399	-	AK307604 TSC_hg19_v1_chr10_-_25012174	-266832	-	CU693144 DQ892076 DQ895269 BC064597 AK095021 NM_145010 AY454125 AK292495 BC026165	25969	-	NM_024838 TSC_hg19_v1_chr10_+_25305540 AK125249 BC035132 BX647989	26545	+	AY528411 NM_020752	185284	+	AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AF480466|ARHGAP21|57584|Rho GTPase activating protein 21##NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21##DQ892076|ENKUR|219670|enkurin, TRPC channel interacting protein##DQ895269|ENKUR|219670|enkurin, TRPC channel interacting protein##AK095021|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_145010|ENKUR|219670|enkurin, TRPC channel interacting protein##AY454125|ENKUR|219670|enkurin, TRPC channel interacting protein##AK292495|ENKUR|219670|enkurin, TRPC channel interacting protein##BC026165|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_024838|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AK125249|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BC035132|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BX647989|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AY528411|GPR158|57512|G protein-coupled receptor 158##NM_020752|GPR158|57512|G protein-coupled receptor 158	0.654679	CTCF.p2:11:0.655
chr12	120218747	120218874	reg1028900.p1	5.371	+	TSC_hg19_v1_chr12_+_120105769 AK312495 NM_006253 BC017671 AF022116 BC001007 BC001056 BC001823 BC018818 U83994 AK301165 Y12556 AB590811 AJ224515	-112958	+	NM_001136534 AK296289	-187510	+	BC040553 NM_178499	-446294	+	AK123136 TSC_hg19_v1_chr12_-_120241305	22487	-	TSC_hg19_v1_chr12_-_120315112 AY209000 AY257469 BC008127 AY681966 NM_001206999 NM_007174	96283	-	TSC_hg19_v1_chr12_+_120427616 AK129960 NM_207311 U88834	208788	+	AK312495|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##NM_006253|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC017671|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AF022116|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001007|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001056|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001823|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC018818|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##U83994|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK301165|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##Y12556|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AJ224515|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##NM_001136534|TMEM233|387890|transmembrane protein 233##AK296289|TMEM233|387890|transmembrane protein 233##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60##AK123136|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY209000|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY257469|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##BC008127|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY681966|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_001206999|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_007174|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AK129960|CCDC64|92558|coiled-coil domain containing 64##NM_207311|CCDC64|92558|coiled-coil domain containing 64##U88834|CCDC64|92558|coiled-coil domain containing 64	0.995949	CTCF.p2:6:0.996
chr4	112552917	112553030	reg1025391.p2	5.371	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-989695	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-994804	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-1008698	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	513641	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	600111	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	654028	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.204847	
chr6	137487105	137487249	reg1007644.p1	5.371	+	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	-120932	-	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	-121339	-	AK316095 BC087842 NM_001008783 AK295424	-243724	+	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	7574	-	TSC_hg19_v1_chr6_-_137540496 BT006814 AB527981 CU675119 AF056979 AK294252	53291	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	53335	-	AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2##BT006814|IFNGR1|3459|interferon gamma receptor 1##AF056979|IFNGR1|3459|interferon gamma receptor 1##AK294252|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1	0.0	
chr6	41691330	41691488	reg1028414.p1	5.371	+	AJ608793 AJ608794 AJ608792 TSC_hg19_v1_chr6_-_41673723	-17708	-	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	-85187	+	TSC_hg19_v1_chr6_+_41514342 BC052803	-177072	+	TSC_hg19_v1_chr6_-_41702787 AJ608787 BC032448 NM_007162	11356	-	M33782 TSC_hg19_v1_chr6_-_41703347	11937	-	TSC_hg19_v1_chr6_-_41703962 AK298390 AJ608786 NM_001167827	12563	-	AJ608793|TFEB|7942|transcription factor EB##AJ608794|TFEB|7942|transcription factor EB##AJ608792|TFEB|7942|transcription factor EB##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor##BC052803|FOXP4|116113|forkhead box P4##AJ608787|TFEB|7942|transcription factor EB##BC032448|TFEB|7942|transcription factor EB##NM_007162|TFEB|7942|transcription factor EB##M33782|TFEB|7942|transcription factor EB##AK298390|TFEB|7942|transcription factor EB##AJ608786|TFEB|7942|transcription factor EB##NM_001167827|TFEB|7942|transcription factor EB	0.0	
chr12	124326571	124326698	reg1026812.p1	5.370	+	NM_207437	-79593	+	TSC_hg19_v1_chr12_+_124196946 AK289391 AF112972 HQ258004	-129608	+	TSC_hg19_v1_chr12_+_124196899 BC022300	-129738	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	130565	-	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	131095	+	AK126577 NM_181709	447075	+	NM_207437|DNAH10|196385|dynein, axonemal, heavy chain 10##AK289391|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##AF112972|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##HQ258004|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##BC022300|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A	0.999199	CTCF.p2:-14:0.999
chr1	230768179	230768301	reg1026922.p1	5.370	+	BC150638 NM_024554	-254850	-	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-565244	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-565298	+	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	9956	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	9993	+	TSC_hg19_v1_chr1_+_230778257 Z34975 AK312678 BC051906 CU677137 DQ892244 DQ895445 EU176335	10064	+	BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2##Z34975|COG2|22796|component of oligomeric golgi complex 2##AK312678|COG2|22796|component of oligomeric golgi complex 2##BC051906|COG2|22796|component of oligomeric golgi complex 2##DQ892244|COG2|22796|component of oligomeric golgi complex 2##DQ895445|COG2|22796|component of oligomeric golgi complex 2##EU176335|COG2|22796|component of oligomeric golgi complex 2	0.938739	CTCF.p2:-26:0.939
chr1	249120788	249120944	reg1023137.p1	5.370	+	AY358453 TSC_hg19_v1_chr1_-_249120082 AK056382 NM_030645	-758	-	NM_001004734 BC137188 BC137189	-275250	-	NM_001001824	-306682	-	TSC_hg19_v1_chr1_+_249132449 BC029310	11591	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	11679	+	TSC_hg19_v1_chr1_+_249132593 BC068506 BC008872	11780	+	AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like##AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##NM_001001824|OR2T27|403239|olfactory receptor, family 2, subfamily T, member 27##BC029310|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672##BC068506|ZNF672|79894|zinc finger protein 672##BC008872|ZNF672|79894|zinc finger protein 672	0.167339	
chr7	22590016	22590122	reg1023275.p1	5.370	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	-50222	-	AL833195 NM_012294	-193548	-	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-604587	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	176754	+	TSC_hg19_v1_chr7_+_22767104 X04403	177049	+	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	272374	-	BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	0.016367	
chr19	17600098	17600202	reg1027591.p2	5.369	+	TSC_hg19_v1_chr19_+_17581338 AK296355 AK315935	-18810	+	TSC_hg19_v1_chr19_+_17581292 AK299852 BC059399 NM_198580	-18850	+	AK294238 TSC_hg19_v1_chr19_+_17579599	-20562	+	TSC_hg19_v1_chr19_-_17622285 AK125289	22137	-	TSC_hg19_v1_chr19_+_17622443 NM_012088	22281	+	TSC_hg19_v1_chr19_+_17622445 BC017706 BC014006 AJ243972 AB463386 DQ893462 DQ896322	22312	+	AK296355|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK315935|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK299852|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##BC059399|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##NM_198580|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK294238|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK125289|LOC100507551|100507551|uncharacterized LOC100507551##NM_012088|PGLS|25796|6-phosphogluconolactonase##BC017706|PGLS|25796|6-phosphogluconolactonase##BC014006|PGLS|25796|6-phosphogluconolactonase##AJ243972|PGLS|25796|6-phosphogluconolactonase##DQ893462|PGLS|25796|6-phosphogluconolactonase##DQ896322|PGLS|25796|6-phosphogluconolactonase	0.066615	
chr2	234823943	234824088	reg1027155.p1	5.369	+	TSC_hg19_v1_chr2_-_234777033 AK301707	-46978	-	TSC_hg19_v1_chr2_-_234777018 AK316372	-47004	-	TSC_hg19_v1_chr2_-_234763182 AB101211 NM_018410	-60819	-	AY090109 NM_024080 BC126342 BC143819	2030	+	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	135372	+	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	581704	-	AK301707|MSL3P1|151507|male-specific lethal 3 homolog (Drosophila) pseudogene 1##AK316372|MSL3P1|151507|male-specific lethal 3 homolog (Drosophila) pseudogene 1##AB101211|HJURP|55355|Holliday junction recognition protein##NM_018410|HJURP|55355|Holliday junction recognition protein##AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C	0.700569	CTCF.p2:-13:0.701
chr2	238318766	238318886	reg1021408.p1	5.369	+	TSC_hg19_v1_chr2_+_237994551 AK289891 BC067774 AK308962 U51205 BC003090 BC080617 CR456994 CU678366	-324249	+	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	-324306	+	TSC_hg19_v1_chr2_-_237994424 AK056246	-324389	-	TSC_hg19_v1_chr2_-_238322786 AK092021 AX747317 AK304870 BC144595 BC150625 BC171790	3959	-	AK308451 TSC_hg19_v1_chr2_-_238322808 BX647500	3983	-	AK303290 TSC_hg19_v1_chr2_-_238322814	3988	-	AK289891|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK308962|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##U51205|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC003090|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC080617|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##CR456994|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK092021|COL6A3|1293|collagen, type VI, alpha 3##AK304870|COL6A3|1293|collagen, type VI, alpha 3##BC144595|COL6A3|1293|collagen, type VI, alpha 3##BC150625|COL6A3|1293|collagen, type VI, alpha 3##BC171790|COL6A3|1293|collagen, type VI, alpha 3##AK308451|COL6A3|1293|collagen, type VI, alpha 3##BX647500|COL6A3|1293|collagen, type VI, alpha 3##AK303290|COL6A3|1293|collagen, type VI, alpha 3	0.830723	CTCF.p2:45:0.831
chr6_mann_hap4	4586667	4586777	reg1026900.p2	5.369	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.964158	CTCF.p2:-6:0.964
chr10	96122731	96122846	reg1025646.p1	5.368	+	AB077992 TSC_hg19_v1_chr10_-_96122697 BC049850 NM_022451 AK091246 AX746873 BC030999 AK292520	-112	-	AK297779 AK289852 NM_001165979 AF170071	-273957	+	TSC_hg19_v1_chr10_+_95753696 AB040949 BC151854 NM_016341	-369074	+	NM_015188 TSC_hg19_v1_chr10_+_96162185	39398	+	TSC_hg19_v1_chr10_+_96162276 AB011180 AB449898	39533	+	TSC_hg19_v1_chr10_+_96305574 AK314485 BX538033 BC068440 AK308331 BC105606 AF155827 NM_018063 BC111789 AB527159 AB102716 AB102717 AB102718 AB102719 AB102720 AB102721 AB102722 AB102723 AB113248 AB113249	182811	+	AB077992|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##BC049850|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##NM_022451|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##AK091246|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##BC030999|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##AK292520|NOC3L|64318|nucleolar complex associated 3 homolog (S. cerevisiae)##AK297779|PLCE1|51196|phospholipase C, epsilon 1##AK289852|PLCE1|51196|phospholipase C, epsilon 1##NM_001165979|PLCE1|51196|phospholipase C, epsilon 1##AF170071|PLCE1|51196|phospholipase C, epsilon 1##AB040949|PLCE1|51196|phospholipase C, epsilon 1##BC151854|PLCE1|51196|phospholipase C, epsilon 1##NM_016341|PLCE1|51196|phospholipase C, epsilon 1##NM_015188|TBC1D12|23232|TBC1 domain family, member 12##AB011180|TBC1D12|23232|TBC1 domain family, member 12##AB449898|TBC1D12|23232|TBC1 domain family, member 12##AK314485|HELLS|3070|helicase, lymphoid-specific##BX538033|HELLS|3070|helicase, lymphoid-specific##BC068440|HELLS|3070|helicase, lymphoid-specific##AK308331|HELLS|3070|helicase, lymphoid-specific##BC105606|HELLS|3070|helicase, lymphoid-specific##AF155827|HELLS|3070|helicase, lymphoid-specific##NM_018063|HELLS|3070|helicase, lymphoid-specific##BC111789|HELLS|3070|helicase, lymphoid-specific##AB102716|HELLS|3070|helicase, lymphoid-specific##AB102717|HELLS|3070|helicase, lymphoid-specific##AB102718|HELLS|3070|helicase, lymphoid-specific##AB102719|HELLS|3070|helicase, lymphoid-specific##AB102720|HELLS|3070|helicase, lymphoid-specific##AB102721|HELLS|3070|helicase, lymphoid-specific##AB102722|HELLS|3070|helicase, lymphoid-specific##AB102723|HELLS|3070|helicase, lymphoid-specific##AB113248|HELLS|3070|helicase, lymphoid-specific##AB113249|HELLS|3070|helicase, lymphoid-specific	0.741163	CTCF.p2:-1:0.726
chr13	54356537	54356604	reg1002204.p1	5.368	+	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	-753658	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	-933795	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-1042608	-	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3358546	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3365116	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3371689	+	AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	0.0	
chr20	30161029	30161209	reg1018345.p2	5.368	+	TSC_hg19_v1_chr20_+_30135200 BC053868	-25885	+	TSC_hg19_v1_chr20_+_30102316 AJ420895 DQ896206 CU687568 AF515663	-58786	+	AF172086 BC062595 TSC_hg19_v1_chr20_+_30102287 AF483215 AJ345029 AK074686	-58838	+	TSC_hg19_v1_chr20_+_30193091 NM_002165 NM_181353 AK313786 BC012420 BC000613 S78986 X77956 AK291152 D13889 D13890 S78825 AB463776 CU680316 DQ891293 DQ893342 DQ894477 DQ896657 EU176458 EU176468 EU176808 BT007443	32017	+	AF257180 NM_032609 BC057779	64583	+	BC032024 TSC_hg19_v1_chr20_-_30288101	126978	-	AJ420895|HM13|81502|histocompatibility (minor) 13##DQ896206|HM13|81502|histocompatibility (minor) 13##AF515663|HM13|81502|histocompatibility (minor) 13##AF172086|HM13|81502|histocompatibility (minor) 13##BC062595|HM13|81502|histocompatibility (minor) 13##AF483215|HM13|81502|histocompatibility (minor) 13##AJ345029|HM13|81502|histocompatibility (minor) 13##AK074686|HM13|81502|histocompatibility (minor) 13##NM_002165|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##NM_181353|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK313786|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC012420|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC000613|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78986|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##X77956|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK291152|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13889|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13890|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78825|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ891293|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ893342|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ894477|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ896657|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176458|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176468|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176808|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BT007443|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AF257180|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_032609|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##BC057779|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)	0.0	
chr4	7805697	7805870	reg1000517.p1	5.368	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	-369127	-	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-611388	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-735982	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	135605	-	TSC_hg19_v1_chr4_-_8073714 AK094798	267933	-	TSC_hg19_v1_chr4_-_8129388 AK301060	323602	-	BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2	0.0	
chr7	28579262	28579424	reg1023908.p1	5.368	+	AK292916 TSC_hg19_v1_chr7_+_28530784	-48578	+	L05911 NM_004904	-104110	+	L05515 NM_182898	-127200	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	146340	+	CU690330 TSC_hg19_v1_chr7_-_28997732	418354	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	418586	-	AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##L05515|CREB5|9586|cAMP responsive element binding protein 5##NM_182898|CREB5|9586|cAMP responsive element binding protein 5##L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats	0.016732	
chr14	72570862	72571005	reg1027191.p2	5.367	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-171067	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-171780	+	AK294895 NM_001204423	-172117	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	789875	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	822202	+	AK098542 AF311602 NM_178441	882724	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.953617	CTCF.p2:-6:0.954
chr17	42201316	42201472	reg1027323.p2	5.367	+	TSC_hg19_v1_chr17_-_42201010 NM_001015053 NM_005474	-378	-	TSC_hg19_v1_chr17_-_42201007 AK294760 AB011172	-412	-	NM_138387 TSC_hg19_v1_chr17_+_42148102 BC021574 BC062596 AK091417 AX746969 BC002494	-53195	+	TSC_hg19_v1_chr17_+_42219297 NM_001171251 NM_024032 AK291924	17872	+	TSC_hg19_v1_chr17_+_42219306 AL834295	17940	+	TSC_hg19_v1_chr17_+_42219388 BC000121 AK021656	18009	+	NM_001015053|HDAC5|10014|histone deacetylase 5##NM_005474|HDAC5|10014|histone deacetylase 5##AK294760|HDAC5|10014|histone deacetylase 5##AB011172|HDAC5|10014|histone deacetylase 5##NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##NM_001171251|C17orf53|78995|chromosome 17 open reading frame 53##NM_024032|C17orf53|78995|chromosome 17 open reading frame 53##AK291924|C17orf53|78995|chromosome 17 open reading frame 53##AL834295|C17orf53|78995|chromosome 17 open reading frame 53##BC000121|C17orf53|78995|chromosome 17 open reading frame 53##AK021656|C17orf53|78995|chromosome 17 open reading frame 53	0.0	
chr19	49831282	49831383	reg1023567.p2	5.367	+	BC034948 BC039336 NM_014037	-2879	-	AK000048 TSC_hg19_v1_chr19_+_49669495	-161882	+	TSC_hg19_v1_chr19_+_49661048 AK074664 AF497623 AK292862 AY297044 AY297045 AY297046 AY046396 AJ575813 BC132727 BC144122 BC144123 AK295820	-170266	+	TSC_hg19_v1_chr19_+_49838662 AK301016	7326	+	TSC_hg19_v1_chr19_+_49838683 NM_001040031 NM_001774 AK301328	7346	+	TSC_hg19_v1_chr19_+_49838702 AL833693 BC110379	7380	+	BC034948|SLC6A16|28968|solute carrier family 6, member 16##NM_014037|SLC6A16|28968|solute carrier family 6, member 16##AK000048|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AF497623|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK292862|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297044|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297045|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297046|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY046396|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AJ575813|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC132727|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144122|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144123|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK295820|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK301016|CD37|951|CD37 molecule##NM_001040031|CD37|951|CD37 molecule##NM_001774|CD37|951|CD37 molecule##AK301328|CD37|951|CD37 molecule##AL833693|CD37|951|CD37 molecule##BC110379|CD37|951|CD37 molecule	0.0	
chr4	96077466	96077603	reg1030403.p1	5.367	+	TSC_hg19_v1_chr4_+_95679109 NM_001203 U89326	-398428	+	BC026029 AM393306 AM393394 AM393485 AM393621 AM393813 DQ890686 DQ893868 AB587372 CU676108 CU679071 AY598328 BT007328 TSC_hg19_v1_chr4_+_95376500	-701084	+	TSC_hg19_v1_chr4_+_95373092 BC017902 BC008741 AK291898 AK291624 AK304125 AK296980 AL832157 AL832686 AF061258 AL833151 AL833438	-704438	+	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	392645	-	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	392842	-	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	683724	+	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB##U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB##BC026029|PDLIM5|10611|PDZ and LIM domain 5##AM393306|PDLIM5|10611|PDZ and LIM domain 5##AM393394|PDLIM5|10611|PDZ and LIM domain 5##AM393485|PDLIM5|10611|PDZ and LIM domain 5##AM393621|PDLIM5|10611|PDZ and LIM domain 5##AM393813|PDLIM5|10611|PDZ and LIM domain 5##DQ890686|PDLIM5|10611|PDZ and LIM domain 5##DQ893868|PDLIM5|10611|PDZ and LIM domain 5##AY598328|PDLIM5|10611|PDZ and LIM domain 5##BT007328|PDLIM5|10611|PDZ and LIM domain 5##BC017902|PDLIM5|10611|PDZ and LIM domain 5##BC008741|PDLIM5|10611|PDZ and LIM domain 5##AK291898|PDLIM5|10611|PDZ and LIM domain 5##AK291624|PDLIM5|10611|PDZ and LIM domain 5##AK304125|PDLIM5|10611|PDZ and LIM domain 5##AK296980|PDLIM5|10611|PDZ and LIM domain 5##AL832157|PDLIM5|10611|PDZ and LIM domain 5##AL832686|PDLIM5|10611|PDZ and LIM domain 5##AF061258|PDLIM5|10611|PDZ and LIM domain 5##AL833151|PDLIM5|10611|PDZ and LIM domain 5##AL833438|PDLIM5|10611|PDZ and LIM domain 5##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2	0.655192	CTCF.p2:-24:0.655
chr6	90307804	90307925	reg1027047.p1	5.367	+	NM_001242814 AK096867	-31239	+	NM_001242811 AK295731	-35787	+	TSC_hg19_v1_chr6_+_90142897 NM_001242809 NM_001242813 NM_014942 AK307792 BC042173 AB023174	-164929	+	EU831412 EU831505 TSC_hg19_v1_chr6_-_90348462 AL122090 BC104668 AK311948 BC009782 AK024783 NM_020466	40599	-	TSC_hg19_v1_chr6_-_90529463 AF503925 NM_014611	221581	-	TSC_hg19_v1_chr6_-_90529484 AK124025	221642	-	NM_001242814|ANKRD6|22881|ankyrin repeat domain 6##AK096867|ANKRD6|22881|ankyrin repeat domain 6##NM_001242811|ANKRD6|22881|ankyrin repeat domain 6##AK295731|ANKRD6|22881|ankyrin repeat domain 6##NM_001242809|ANKRD6|22881|ankyrin repeat domain 6##NM_001242813|ANKRD6|22881|ankyrin repeat domain 6##NM_014942|ANKRD6|22881|ankyrin repeat domain 6##AK307792|ANKRD6|22881|ankyrin repeat domain 6##BC042173|ANKRD6|22881|ankyrin repeat domain 6##AB023174|ANKRD6|22881|ankyrin repeat domain 6##EU831412|LYRM2|57226|LYR motif containing 2##EU831505|LYRM2|57226|LYR motif containing 2##AL122090|LYRM2|57226|LYR motif containing 2##BC104668|LYRM2|57226|LYR motif containing 2##AK311948|LYRM2|57226|LYR motif containing 2##BC009782|LYRM2|57226|LYR motif containing 2##AK024783|LYRM2|57226|LYR motif containing 2##NM_020466|LYRM2|57226|LYR motif containing 2##AF503925|MDN1|23195|MDN1, midasin homolog (yeast)##NM_014611|MDN1|23195|MDN1, midasin homolog (yeast)##AK124025|MDN1|23195|MDN1, midasin homolog (yeast)	0.019764	
chr6_mcf_hap5	4603117	4603227	reg1027690.p2	5.367	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.964158	CTCF.p2:-6:0.964
chr7	74898620	74898721	reg1026863.p2	5.367	+	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	-31150	-	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	-390296	+	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	-408978	-	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	89900	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	126295	+	AK126486 TSC_hg19_v1_chr7_+_75039644 BC044928 BC103750	140984	+	NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC044928|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC103750|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1	0.0	
chr1	165112846	165112960	reg1024072.p1	5.366	+	TSC_hg19_v1_chr1_+_164818083 AK022520	-294780	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	-583917	+	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	-584312	+	AK122800 NM_001174069	212572	-	AK127724 NM_177398	213048	-	AB593016 AK312922 NM_006917	301642	-	AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AB593016|RXRG|6258|retinoid X receptor, gamma##AK312922|RXRG|6258|retinoid X receptor, gamma##NM_006917|RXRG|6258|retinoid X receptor, gamma	0.979763	CTCF.p2:-19:0.980
chr16	81842670	81842851	reg1025641.p2	5.366	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-29830	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-29858	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	-29863	+	BC019670 AK315652 AK026740 NM_145168	202308	-	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	226101	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	226172	+	BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.0	
chr17_ctg5_hap1	1417771	1417896	reg1026670.p1	5.366	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999815	CTCF.p2:-7:1.000
chr2	89180309	89180476	reg1006355.p2	5.366	+	S49006 TSC_hg19_v1_chr2_-_89165772	-14680	-	BX648045 TSC_hg19_v1_chr2_+_89065391 AL137717 BC031698	-114991	+	TSC_hg19_v1_chr2_+_88991190 NM_144563 AY050633 BC015529	-189177	+	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	4698	+	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	112021	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	262197	-	BX648045|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AL137717|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##BC031698|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##NM_144563|RPIA|22934|ribose 5-phosphate isomerase A##AY050633|RPIA|22934|ribose 5-phosphate isomerase A##BC015529|RPIA|22934|ribose 5-phosphate isomerase A##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus	0.936488	CTCF.p2:49:0.936
chr4	141664579	141664710	reg1028119.p1	5.366	+	U28480 BC069556 BC096736 BC098168 BC098258 BC098352 NM_021833	-174724	-	TSC_hg19_v1_chr4_+_141445351 BX648843 BC015168 AK093087	-219289	+	NM_153702 TSC_hg19_v1_chr4_+_141445321 AK312800 BX648349	-219328	+	NM_015130 TSC_hg19_v1_chr4_-_141677529	12855	-	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	389887	-	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	477411	+	U28480|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC069556|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC096736|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098168|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098258|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BC098352|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##NM_021833|UCP1|7350|uncoupling protein 1 (mitochondrial, proton carrier)##BX648843|ELMOD2|255520|ELMO/CED-12 domain containing 2##BC015168|ELMOD2|255520|ELMO/CED-12 domain containing 2##AK093087|ELMOD2|255520|ELMO/CED-12 domain containing 2##NM_153702|ELMOD2|255520|ELMO/CED-12 domain containing 2##AK312800|ELMOD2|255520|ELMO/CED-12 domain containing 2##BX648349|ELMOD2|255520|ELMO/CED-12 domain containing 2##NM_015130|TBC1D9|23158|TBC1 domain family, member 9 (with GRAM domain)##AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330	0.757226	CTCF.p2:-16:0.757
chrX	152736419	152736513	reg1026953.p2	5.366	+	CU675933 TSC_hg19_v1_chrX_-_152736028 AF267739 AK302066 AK300650 AF319570 AF319571 AF319572 AF319573 AB464338 AM393157 DQ891762 DQ894946 BC008141	-415	-	NM_080701	-24522	-	NM_001136273	-52686	+	NM_017518	136	-	NM_001711 TSC_hg19_v1_chrX_+_152760437 AK293289 AK293268 AK222484 AK291955 AK297966 AK092954 AX747825 AK093023 AX747863	23930	+	TSC_hg19_v1_chrX_+_152760466 BC002416 BC004244 J04599 AK223302	23995	+	AF267739|HAUS7|55559|HAUS augmin-like complex, subunit 7##AK302066|HAUS7|55559|HAUS augmin-like complex, subunit 7##AK300650|HAUS7|55559|HAUS augmin-like complex, subunit 7##AM393157|HAUS7|55559|HAUS augmin-like complex, subunit 7##DQ891762|TREX2|11219|three prime repair exonuclease 2##DQ894946|HAUS7|55559|HAUS augmin-like complex, subunit 7##BC008141|HAUS7|55559|HAUS augmin-like complex, subunit 7##NM_080701|TREX2|11219|three prime repair exonuclease 2##NM_001136273|ZFP92|139735|zinc finger protein 92 homolog (mouse)##NM_017518|HAUS7|55559|HAUS augmin-like complex, subunit 7##NM_001711|BGN|633|biglycan##AK293289|BGN|633|biglycan##AK293268|BGN|633|biglycan##AK222484|BGN|633|biglycan##AK291955|BGN|633|biglycan##AK297966|BGN|633|biglycan##AK092954|BGN|633|biglycan##AK093023|BGN|633|biglycan##BC002416|BGN|633|biglycan##BC004244|BGN|633|biglycan##J04599|BGN|633|biglycan##AK223302|BGN|633|biglycan	1.525205	CTCF.p2:-21:0.975	CTCF.p2:24:0.551
chr21	16095357	16095538	reg1023631.p2	5.365	+	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	-176798	-	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-339974	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-506950	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	341770	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	1006878	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	1007094	+	BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25	0.0	
chrUn_gl000213	9267	9333	reg1029786.p1	5.365	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.947197	CTCF.p2:-18:0.947
chr10	98479031	98479154	reg1010478.p1	5.364	+	TSC_hg19_v1_chr10_-_98346798 AF269150 BC136788 BC136789 BC144412 NM_020123	-132269	-	TSC_hg19_v1_chr10_-_98346770 AK314348	-132314	-	TSC_hg19_v1_chr10_-_98346739 AF160213	-132420	-	BX648550 TSC_hg19_v1_chr10_-_98480272 AK125635 NM_152309	1149	-	TSC_hg19_v1_chr10_+_98592020 NM_001170765 NM_001170766 AL832106 AK308356 BC053359	112961	+	TSC_hg19_v1_chr10_-_98592186 AB593180	113108	-	AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3##BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3##AK314348|TM9SF3|56889|transmembrane 9 superfamily member 3##AF160213|TM9SF3|56889|transmembrane 9 superfamily member 3##BX648550|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AK125635|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_152309|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor##AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor##BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor	0.852849	CTCF.p2:8:0.853
chr11	3915487	3915668	reg1022969.p1	5.364	+	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	-38648	+	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	-53378	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	-53422	-	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	200412	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	200489	+	TSC_hg19_v1_chr11_+_4116085 AK297988 BC006498 CU675435 DQ893028 DQ896272	200582	+	NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1##X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1##AK297988|RRM1|6240|ribonucleotide reductase M1##BC006498|RRM1|6240|ribonucleotide reductase M1##DQ893028|RRM1|6240|ribonucleotide reductase M1##DQ896272|RRM1|6240|ribonucleotide reductase M1	0.0	
chr1	205091400	205091551	reg1023588.p2	5.364	+	TSC_hg19_v1_chr1_-_205091144 NM_001193272 NM_001193273 NM_005057	-328	-	AB527310 CU691040 DQ891205 DQ894388 BC075059 BC075060 AK290137 BC037284 AK296978 TSC_hg19_v1_chr1_-_205091104 X85134 BC053856	-408	-	BC061592 AY359081 NM_203376 AK303432	-37888	-	TSC_hg19_v1_chr1_-_205180683 AB384485 AY208850 EU832787 GQ129280 BC072406 AK298011 BC117411 BC143603 BC053627	89198	-	TSC_hg19_v1_chr1_-_205180700 AY429674 BC060870 NM_015375 NM_199462	89244	-	TSC_hg19_v1_chr1_+_205197073 AB007950 NM_014858 AK131419	105608	+	NM_001193272|RBBP5|5929|retinoblastoma binding protein 5##NM_001193273|RBBP5|5929|retinoblastoma binding protein 5##NM_005057|RBBP5|5929|retinoblastoma binding protein 5##DQ891205|RBBP5|5929|retinoblastoma binding protein 5##DQ894388|RBBP5|5929|retinoblastoma binding protein 5##BC075059|RBBP5|5929|retinoblastoma binding protein 5##BC075060|RBBP5|5929|retinoblastoma binding protein 5##AK290137|RBBP5|5929|retinoblastoma binding protein 5##BC037284|RBBP5|5929|retinoblastoma binding protein 5##AK296978|RBBP5|5929|retinoblastoma binding protein 5##X85134|RBBP5|5929|retinoblastoma binding protein 5##BC053856|RBBP5|5929|retinoblastoma binding protein 5##BC061592|TMEM81|388730|transmembrane protein 81##AY359081|TMEM81|388730|transmembrane protein 81##NM_203376|TMEM81|388730|transmembrane protein 81##AK303432|TMEM81|388730|transmembrane protein 81##AY208850|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##EU832787|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##GQ129280|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC072406|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AK298011|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC117411|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC143603|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC053627|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AY429674|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC060870|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_015375|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_199462|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2	0.0	
chr10	54577850	54577947	reg1022484.p1	5.363	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-46472	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-503783	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-1118551	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	1983100	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	2780876	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	3543116	-	AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor	0.98926	CTCF.p2:-16:0.989
chr14	36283745	36283859	reg1029350.p1	5.363	+	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	-5407	-	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	-5655	-	AF260323 NM_032594 BC130377 BC130379 TSC_hg19_v1_chr14_+_36003369 AB037912 AK096639	-280493	+	TSC_hg19_v1_chr14_+_36295599 NM_032352 AY827074 BC006250 AK297106 AK310359 AK315424	11801	+	AB463855 CU677729 BX248287 TSC_hg19_v1_chr14_-_36789806 AF208857 BC016821 AK293473 BC005197 AB038523 AK315290 NM_001144891 NM_016586	506042	-	TSC_hg19_v1_chr14_-_36982983 BC042093 NM_001101341	699180	-	AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AF260323|INSM2|84684|insulinoma-associated 2##NM_032594|INSM2|84684|insulinoma-associated 2##BC130377|INSM2|84684|insulinoma-associated 2##BC130379|INSM2|84684|insulinoma-associated 2##AB037912|INSM2|84684|insulinoma-associated 2##AK096639|INSM2|84684|insulinoma-associated 2##NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BX248287|MBIP|51562|MAP3K12 binding inhibitory protein 1##AF208857|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC016821|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK293473|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC005197|MBIP|51562|MAP3K12 binding inhibitory protein 1##AB038523|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK315290|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_001144891|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_016586|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC042093|SFTA3|253970|surfactant associated 3##NM_001101341|SFTA3|253970|surfactant associated 3	0.998815	CTCF.p2:0:0.999
chr14	78630711	78630810	reg1027283.p1	5.363	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-364310	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-403251	-	NM_001173978 NM_174943 BC107147 BC113929 BC113986	-403516	+	AB018286 BC152457 NM_004796	239332	+	NM_001105250 NM_138970 AK056530 BC059368 BC068469	1114944	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	2047144	-	NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001173978|C14orf178|283579|chromosome 14 open reading frame 178##NM_174943|C14orf178|283579|chromosome 14 open reading frame 178##BC107147|C14orf178|283579|chromosome 14 open reading frame 178##BC113929|C14orf178|283579|chromosome 14 open reading frame 178##BC113986|C14orf178|283579|chromosome 14 open reading frame 178##AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II	0.859017	CTCF.p2:14:0.859
chr15	89182099	89182236	reg1022727.p1	5.363	+	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	-17597	+	BC109060 BC109061 BC073867 AK054603 BC064591 AB073887 NM_001144074 NM_017996	-92316	-	TSC_hg19_v1_chr15_+_89010935 BC032378 BC012489 AK027059 AK026165 AK222933 AK315407 AK223152 BC000200 CU680342 CU689362 DQ891586 DQ894780 BC009451	-171241	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	19	+	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	164519	+	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	256631	-	NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC032378|MRPS11|64963|mitochondrial ribosomal protein S11##BC012489|MRPS11|64963|mitochondrial ribosomal protein S11##AK027059|MRPS11|64963|mitochondrial ribosomal protein S11##AK026165|MRPS11|64963|mitochondrial ribosomal protein S11##AK222933|MRPS11|64963|mitochondrial ribosomal protein S11##AK315407|MRPS11|64963|mitochondrial ribosomal protein S11##AK223152|MRPS11|64963|mitochondrial ribosomal protein S11##BC000200|MRPS11|64963|mitochondrial ribosomal protein S11##DQ891586|MRPS11|64963|mitochondrial ribosomal protein S11##DQ894780|MRPS11|64963|mitochondrial ribosomal protein S11##BC009451|MRPS11|64963|mitochondrial ribosomal protein S11##BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3	0.11185	
chr2	96011395	96011545	reg1025223.p1	5.363	+	TSC_hg19_v1_chr2_+_95963054 NM_013434 AB209076 AJ131730 AK095539 AK315437 BC012850 AF120102 AB528387 AF199599 AF367022 BT020075 CU680412 DQ148485 DQ892078 DQ895271 DQ895316	-48364	+	BC113877 BC114525 AK091175 AX746828 TSC_hg19_v1_chr2_+_95940239 AK290366 AK313267 AY358377 BC025736	-71236	+	TSC_hg19_v1_chr2_+_95940195 AF245303 AF245304 NM_001165977 NM_001165978 NM_144707	-71273	+	DQ148486 NM_001034914	1297	+	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	57009	+	NM_001164464	139008	-	NM_013434|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AJ131730|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK095539|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK315437|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC012850|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF120102|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF199599|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF367022|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BT020075|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ148485|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ892078|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895271|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895316|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC113877|PROM2|150696|prominin 2##BC114525|PROM2|150696|prominin 2##AK091175|PROM2|150696|prominin 2##AK290366|PROM2|150696|prominin 2##AK313267|PROM2|150696|prominin 2##AY358377|PROM2|150696|prominin 2##BC025736|PROM2|150696|prominin 2##AF245303|PROM2|150696|prominin 2##AF245304|PROM2|150696|prominin 2##NM_001165977|PROM2|150696|prominin 2##NM_001165978|PROM2|150696|prominin 2##NM_144707|PROM2|150696|prominin 2##DQ148486|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_001034914|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_001164464|TRIM43B|653192|tripartite motif containing 43B	0.649541	CTCF.p2:-15:0.631
chr5	107787094	107787216	reg1025044.p1	5.363	+	BC063316 NM_001163315	-69357	-	TSC_hg19_v1_chr5_-_107717106 AK126722	-70025	-	AK308672 NM_001962 U26403	-780565	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	276825	-	AK293376 J03358 NM_005246 AK296874	296407	+	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	297517	+	BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AB593118|HP07349|100652853|uncharacterized protein HP07349##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase	0.8442	CTCF.p2:-6:0.844
chr5	130500366	130500513	reg1018968.p1	5.363	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	-1259952	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-1704386	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-2070014	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	492	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	551	-	TSC_hg19_v1_chr5_-_130501019 NM_005340	604	-	BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1##NM_005340|HINT1|3094|histidine triad nucleotide binding protein 1	0.0	
chr6	35536871	35536957	reg1025936.p2	5.363	+	CU689498 EU446712 BC065261 NM_003322 BC032714 BC001761 BC021268 AB593124 AB593123 DQ426893	-56240	-	BC010053 BC027877 BC091488 AF142482 TSC_hg19_v1_chr6_-_35464854 NM_003214	-72102	-	AB082926 BC006791 U12404 TSC_hg19_v1_chr6_+_35436204 BC011366	-100711	+	TSC_hg19_v1_chr6_-_35656616 HM245391 AB209893	119706	-	TSC_hg19_v1_chr6_-_35656693 BC111050 AK222807 AK302704 AK303356 AK312422 BX647390 NM_001145776 AF194172 U71321 NM_001145777 NM_004117	119792	-	BC042605 NM_001145775	159445	-	EU446712|TULP1|7287|tubby like protein 1##BC065261|TULP1|7287|tubby like protein 1##NM_003322|TULP1|7287|tubby like protein 1##BC032714|TULP1|7287|tubby like protein 1##AB593124|TULP1|7287|tubby like protein 1##AB593123|TULP1|7287|tubby like protein 1##DQ426893|TULP1|7287|tubby like protein 1##BC010053|TEAD3|7005|TEA domain family member 3##BC027877|TEAD3|7005|TEA domain family member 3##BC091488|TEAD3|7005|TEA domain family member 3##AF142482|TEAD3|7005|TEA domain family member 3##NM_003214|TEAD3|7005|TEA domain family member 3##AB082926|RPL10A|4736|ribosomal protein L10a##BC006791|RPL10A|4736|ribosomal protein L10a##U12404|RPL10A|4736|ribosomal protein L10a##BC011366|RPL10A|4736|ribosomal protein L10a##HM245391|FKBP5|2289|FK506 binding protein 5##AB209893|FKBP5|2289|FK506 binding protein 5##BC111050|FKBP5|2289|FK506 binding protein 5##AK222807|FKBP5|2289|FK506 binding protein 5##AK302704|FKBP5|2289|FK506 binding protein 5##AK303356|FKBP5|2289|FK506 binding protein 5##AK312422|FKBP5|2289|FK506 binding protein 5##BX647390|FKBP5|2289|FK506 binding protein 5##NM_001145776|FKBP5|2289|FK506 binding protein 5##AF194172|FKBP5|2289|FK506 binding protein 5##U71321|FKBP5|2289|FK506 binding protein 5##NM_001145777|FKBP5|2289|FK506 binding protein 5##NM_004117|FKBP5|2289|FK506 binding protein 5##BC042605|FKBP5|2289|FK506 binding protein 5##NM_001145775|FKBP5|2289|FK506 binding protein 5	0.99564	CTCF.p2:9:0.996
chr6	46958791	46958888	reg1022689.p1	5.363	+	AY498875 AL050295 NM_015234	-36236	-	AL832125 AB018301 AK289503 AK092043 AX747330 NM_001098518	-69173	-	TSC_hg19_v1_chr6_-_46825943 BC036002	-132891	-	CR627234 BC104214 BC104215 AK026337 AK225460 AB045123 NM_025048 NM_153840 AK095348	51199	-	TSC_hg19_v1_chr6_-_47253972 BC010241	295143	-	TSC_hg19_v1_chr6_-_47254146 AJ420531	295342	-	AY498875|GPR116|221395|G protein-coupled receptor 116##AL050295|GPR116|221395|G protein-coupled receptor 116##NM_015234|GPR116|221395|G protein-coupled receptor 116##AL832125|GPR116|221395|G protein-coupled receptor 116##AB018301|GPR116|221395|G protein-coupled receptor 116##AK289503|GPR116|221395|G protein-coupled receptor 116##AK092043|GPR116|221395|G protein-coupled receptor 116##NM_001098518|GPR116|221395|G protein-coupled receptor 116##BC036002|GPR116|221395|G protein-coupled receptor 116##CR627234|GPR110|266977|G protein-coupled receptor 110##BC104214|GPR110|266977|G protein-coupled receptor 110##BC104215|GPR110|266977|G protein-coupled receptor 110##AK026337|GPR110|266977|G protein-coupled receptor 110##AK225460|GPR110|266977|G protein-coupled receptor 110##AB045123|GPR110|266977|G protein-coupled receptor 110##NM_025048|GPR110|266977|G protein-coupled receptor 110##NM_153840|GPR110|266977|G protein-coupled receptor 110##AK095348|GPR110|266977|G protein-coupled receptor 110##BC010241|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AJ420531|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21	0.044797	
chr11	115373882	115373974	reg1027925.p2	5.362	+	AY309502 TSC_hg19_v1_chr11_-_115088658	-285280	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-824680	+	AK000134 AK225236 TSC_hg19_v1_chr11_-_114466485 NM_001077639 NM_017678	-907450	-	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	1252	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	1269770	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	1284787	-	AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##AK000134|FAM55D|54827|family with sequence similarity 55, member D##AK225236|FAM55D|54827|family with sequence similarity 55, member D##NM_001077639|FAM55D|54827|family with sequence similarity 55, member D##NM_017678|FAM55D|54827|family with sequence similarity 55, member D##AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259	0.019898	
chr19	19221259	19221364	reg1026504.p1	5.362	+	TSC_hg19_v1_chr19_+_19174802 NM_178526 BC045598 FN356975	-46502	+	BC067125 TSC_hg19_v1_chr19_+_19144690	-76651	+	TSC_hg19_v1_chr19_+_19144524 BC056161	-76764	+	TSC_hg19_v1_chr19_-_19249264 AK225424 AK000429 NM_017814	27943	-	TSC_hg19_v1_chr19_-_19249268 BC005210 AK096964	27964	-	TSC_hg19_v1_chr19_-_19281067 AK057210	59756	-	NM_178526|SLC25A42|284439|solute carrier family 25, member 42##BC045598|SLC25A42|284439|solute carrier family 25, member 42##FN356975|SLC25A42|284439|solute carrier family 25, member 42##BC067125|ARMC6|93436|armadillo repeat containing 6##BC056161|ARMC6|93436|armadillo repeat containing 6##AK225424|TMEM161A|54929|transmembrane protein 161A##AK000429|TMEM161A|54929|transmembrane protein 161A##NM_017814|TMEM161A|54929|transmembrane protein 161A##BC005210|TMEM161A|54929|transmembrane protein 161A##AK096964|TMEM161A|54929|transmembrane protein 161A##AK057210|MEF2B|100271849|myocyte enhancer factor 2B	0.331624	CTCF.p2:26:0.332
chr4	152722874	152722991	reg1021855.p1	5.362	+	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	-40791	-	TSC_hg19_v1_chr4_+_152330327 NM_001109977	-392571	+	BC121109 BC121110 NM_183375	-524608	+	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	550964	-	NM_001013415 AY008274	580732	-	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	733362	-	AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##NM_001109977|FAM160A1|729830|family with sequence similarity 160, member A1##BC121109|PRSS48|345062|protease, serine, 48##BC121110|PRSS48|345062|protease, serine, 48##NM_183375|PRSS48|345062|protease, serine, 48##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7	0.015521	
chr7	2249452	2249633	reg1004197.p2	5.362	+	TSC_hg19_v1_chr7_-_1980177 BC018870	-269379	-	NM_001128636	-500745	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-639721	+	AK310481 TSC_hg19_v1_chr7_-_2272542	22993	-	TSC_hg19_v1_chr7_-_2272559 AF083811	23018	-	TSC_hg19_v1_chr7_-_2272581 AK090959 AK310831 AK314227 AX746704 NM_001013836 NM_001013837 NM_003550	23038	-	BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AF083811|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK090959|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310831|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK314227|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013836|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013837|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_003550|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.0	
chr12	112262275	112262362	reg1025693.p1	5.361	+	TSC_hg19_v1_chr12_+_112204765 AY621070 BC002967 X05409 AK223373 AK301375 Y00109 AK314856 BC071839 AB385105 CR456991 CU678320	-57570	+	NM_000690 NM_001204889 TSC_hg19_v1_chr12_+_112204694	-57626	+	AK092356 AK310923 AX747497 TSC_hg19_v1_chr12_+_112123871 AL832043 BC015056 AY323912 BC126358	-138412	+	TSC_hg19_v1_chr12_-_112279735 BC071748 BC007973 BC015633 BC032560 AK124158 BC107695	17414	-	AK122767 TSC_hg19_v1_chr12_+_112280039	17594	+	BC041049 TSC_hg19_v1_chr12_+_112280044	17755	+	AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##NM_000690|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##NM_001204889|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK092356|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AK310923|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AL832043|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC015056|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AY323912|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC126358|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC007973|C12orf47|51275|chromosome 12 open reading frame 47##BC015633|C12orf47|51275|chromosome 12 open reading frame 47##BC032560|C12orf47|51275|chromosome 12 open reading frame 47##AK122767|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##BC041049|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5	0.141232	
chr22	46432732	46432854	reg1025520.p2	5.361	+	AF416743 NM_058238 TSC_hg19_v1_chr22_-_46373045	-59764	-	CR456568 TSC_hg19_v1_chr22_+_46067931 AK095309 CR457381 DQ893240 DQ896570	-364876	+	AK025734 TSC_hg19_v1_chr22_+_46067746 AF119662 BC007508	-365037	+	TSC_hg19_v1_chr22_+_46449736 BC036832	16931	+	AB528792 AK001807 NM_018280 TSC_hg19_v1_chr22_-_46450052	17219	-	NM_001001928 NM_005036 AY258330 TSC_hg19_v1_chr22_+_46546555 AY258328	113737	+	AF416743|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_058238|WNT7B|7477|wingless-type MMTV integration site family, member 7B##CR456568|ATXN10|25814|ataxin 10##AK095309|ATXN10|25814|ataxin 10##CR457381|ATXN10|25814|ataxin 10##DQ893240|ATXN10|25814|ataxin 10##DQ896570|ATXN10|25814|ataxin 10##AK025734|ATXN10|25814|ataxin 10##AF119662|ATXN10|25814|ataxin 10##BC007508|ATXN10|25814|ataxin 10##AK001807|C22orf26|55267|chromosome 22 open reading frame 26##NM_018280|C22orf26|55267|chromosome 22 open reading frame 26##NM_001001928|PPARA|5465|peroxisome proliferator-activated receptor alpha##NM_005036|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258330|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258328|PPARA|5465|peroxisome proliferator-activated receptor alpha	0.010358	
chr2	47979558	47979738	reg1027353.p2	5.361	+	TSC_hg19_v1_chr2_-_47918421 D28393	-61229	-	AF287302 NM_022055 BC047749	-182165	-	TSC_hg19_v1_chr2_+_47630294 AK223284 AK296831 AK297763 BX649122 BC021566 AK311330 DQ892558 DQ895772 AB489153 BC001122 U03911 CU692370 DQ648894	-349331	+	BC071594 NM_000179 TSC_hg19_v1_chr2_+_48010283 U28946 D89646 BC104665 U54777 BC004246 AK293921 AK308392 AB590153 DQ892898	30648	+	AK304140 AK315108 NM_025133	136203	-	BC130445 BC136480 AK292877 AF176706 AF174599 AK223592 BC043258 AY827075 TSC_hg19_v1_chr2_-_48132864 AK297444 NM_001190274	153145	-	D28393|RPL18A|6142|ribosomal protein L18a##AF287302|KCNK12|56660|potassium channel, subfamily K, member 12##NM_022055|KCNK12|56660|potassium channel, subfamily K, member 12##BC047749|KCNK12|56660|potassium channel, subfamily K, member 12##AK223284|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK296831|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK297763|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BX649122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC021566|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK311330|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ892558|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ895772|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC001122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U03911|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ648894|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC071594|MSH6|2956|mutS homolog 6 (E. coli)##NM_000179|MSH6|2956|mutS homolog 6 (E. coli)##U28946|MSH6|2956|mutS homolog 6 (E. coli)##D89646|MSH6|2956|mutS homolog 6 (E. coli)##BC104665|MSH6|2956|mutS homolog 6 (E. coli)##U54777|MSH6|2956|mutS homolog 6 (E. coli)##BC004246|MSH6|2956|mutS homolog 6 (E. coli)##AK293921|MSH6|2956|mutS homolog 6 (E. coli)##AK308392|MSH6|2956|mutS homolog 6 (E. coli)##DQ892898|MSH6|2956|mutS homolog 6 (E. coli)##AK304140|FBXO11|80204|F-box protein 11##AK315108|FBXO11|80204|F-box protein 11##NM_025133|FBXO11|80204|F-box protein 11##BC130445|FBXO11|80204|F-box protein 11##BC136480|FBXO11|80204|F-box protein 11##AK292877|FBXO11|80204|F-box protein 11##AF176706|FBXO11|80204|F-box protein 11##AF174599|FBXO11|80204|F-box protein 11##AK223592|FBXO11|80204|F-box protein 11##BC043258|FBXO11|80204|F-box protein 11##AY827075|FBXO11|80204|F-box protein 11##AK297444|FBXO11|80204|F-box protein 11##NM_001190274|FBXO11|80204|F-box protein 11	0.0	
chr3	127576244	127576343	reg1020918.p1	5.361	+	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	-34151	-	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	-34863	-	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-184476	+	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	58025	+	NM_207335 AB590042 AM393308 AM393457	65609	+	TSC_hg19_v1_chr3_+_127771248 AK027423 AK074706 NM_013336	194894	+	AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##NM_207335|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393308|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393457|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AK027423|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AK074706|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##NM_013336|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	0.864433	CTCF.p2:31:0.864
chr4	36189481	36189595	reg1027344.p1	5.361	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-5467079	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-5467344	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-5467539	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	56499	-	AK131492 NM_001136536 AK304357 AK316523	93708	+	BC157885 NM_001170700	96105	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.561234	CTCF.p2:11:0.561
chr5	59109894	59110074	reg1011540.p2	5.361	+	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	-45529	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	-45636	-	U50159 NM_006203 L20970	-227685	-	NM_001104631	79636	-	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	673920	-	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	674056	+	NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)	0.92208	CTCF.p2:-3:0.922
chr7	50321311	50321491	reg1026189.p1	5.361	+	NM_001161834	-185720	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	-188577	-	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-508131	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	22952	+	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	26918	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	196653	-	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1	0.0	
chr8	17777001	17777124	reg1025347.p1	5.361	+	TSC_hg19_v1_chr8_-_17767878 BC073919	-9182	-	AF042354 AF168954 NM_147203 NM_201553 AX772838 TSC_hg19_v1_chr8_-_17753015 D14446 AK225619 AK289448 AK225616 BC007047 NM_004467 NM_201552	-24116	-	BT006635 CU675515 D87342 TSC_hg19_v1_chr8_-_17743179	-33942	-	TSC_hg19_v1_chr8_+_17780369 L27841 NM_006197	3334	+	TSC_hg19_v1_chr8_+_17780498 AK307583 BC098391	3433	+	TSC_hg19_v1_chr8_+_17780501 BC000453	3443	+	AF042354|FGL1|2267|fibrinogen-like 1##AF168954|FGL1|2267|fibrinogen-like 1##NM_147203|FGL1|2267|fibrinogen-like 1##NM_201553|FGL1|2267|fibrinogen-like 1##AX772838|FGL1|2267|fibrinogen-like 1##D14446|FGL1|2267|fibrinogen-like 1##AK225619|FGL1|2267|fibrinogen-like 1##AK289448|FGL1|2267|fibrinogen-like 1##AK225616|FGL1|2267|fibrinogen-like 1##BC007047|FGL1|2267|fibrinogen-like 1##NM_004467|FGL1|2267|fibrinogen-like 1##NM_201552|FGL1|2267|fibrinogen-like 1##BT006635|FGL1|2267|fibrinogen-like 1##D87342|FGL1|2267|fibrinogen-like 1##L27841|PCM1|5108|pericentriolar material 1##NM_006197|PCM1|5108|pericentriolar material 1##AK307583|PCM1|5108|pericentriolar material 1##BC000453|PCM1|5108|pericentriolar material 1	0.733398	CTCF.p2:4:0.733
chrX	133055963	133056107	reg1026057.p1	5.361	+	TSC_hg19_v1_chrX_-_132549514 AK312605 AY358507 BC017166	-506567	-	AB528412 CU677845 DQ891809 DQ894992 AF064826 AY052833 AF030186 NM_001448 TSC_hg19_v1_chrX_-_132549316	-506861	-	EU446842 BC074762 BC117336 BC126361 AB464736 AF219119 NM_016521	-703795	-	AB527294 CU690242 DQ349136 DQ349137 DQ349138 DQ893658 DQ895822 TSC_hg19_v1_chrX_-_133119622 Z37987 L47176 AK222761 AK222766 AK310689 BC035972 U50410	63514	-	TSC_hg19_v1_chrX_-_133119645 L47125 AK300168 NM_001164617 NM_001164618 NM_001164619 NM_004484	63616	-	NM_001101357	315041	+	AK312605|GPC4|2239|glypican 4##AY358507|GPC4|2239|glypican 4##BC017166|GPC4|2239|glypican 4##DQ891809|GPC4|2239|glypican 4##DQ894992|GPC4|2239|glypican 4##AF064826|GPC4|2239|glypican 4##AY052833|GPC4|2239|glypican 4##AF030186|GPC4|2239|glypican 4##NM_001448|GPC4|2239|glypican 4##EU446842|TFDP3|51270|transcription factor Dp family, member 3##BC074762|TFDP3|51270|transcription factor Dp family, member 3##BC117336|TFDP3|51270|transcription factor Dp family, member 3##BC126361|TFDP3|51270|transcription factor Dp family, member 3##AF219119|TFDP3|51270|transcription factor Dp family, member 3##NM_016521|TFDP3|51270|transcription factor Dp family, member 3##DQ349136|GPC3|2719|glypican 3##DQ349137|GPC3|2719|glypican 3##DQ349138|GPC3|2719|glypican 3##DQ893658|GPC3|2719|glypican 3##DQ895822|GPC3|2719|glypican 3##Z37987|GPC3|2719|glypican 3##L47176|GPC3|2719|glypican 3##AK222761|GPC3|2719|glypican 3##AK222766|GPC3|2719|glypican 3##AK310689|GPC3|2719|glypican 3##BC035972|GPC3|2719|glypican 3##U50410|GPC3|2719|glypican 3##L47125|GPC3|2719|glypican 3##AK300168|GPC3|2719|glypican 3##NM_001164617|GPC3|2719|glypican 3##NM_001164618|GPC3|2719|glypican 3##NM_001164619|GPC3|2719|glypican 3##NM_004484|GPC3|2719|glypican 3##NM_001101357|CCDC160|347475|coiled-coil domain containing 160	0.469022	CTCF.p2:12:0.469
chr1	230442075	230442183	reg1026459.p2	5.360	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-239133	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-239187	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-680115	+	BC150638 NM_024554	71261	-	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	336067	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	336104	+	AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2	0.790688	CTCF.p2:8:0.791
chr1	40138452	40138563	reg1025284.p1	5.360	+	AF331801 AY028778 BC103879 BC103880 NM_032526	-798	-	TSC_hg19_v1_chr1_-_40105343 NM_014571	-33162	-	AF311885 EU446871 TSC_hg19_v1_chr1_-_40105307 AB463718 AJ272215 BC006087	-33191	-	TSC_hg19_v1_chr1_-_40157103 BC030827 AL136591 NM_016257 AK294412 AK312314 AK294813	18595	-	NM_001195007 NM_006112 NM_203456 TSC_hg19_v1_chr1_+_40204553 AK313666 BC008451 AL833576 AF104012 AF104013 AK094660 AK304694 BC107736	66031	+	AK130628 TSC_hg19_v1_chr1_+_40204563 AK293094 BC004898 AB464008 CU678794 DQ160195	66060	+	AF331801|NT5C1A|84618|5'-nucleotidase, cytosolic IA##AY028778|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC103879|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC103880|NT5C1A|84618|5'-nucleotidase, cytosolic IA##NM_032526|NT5C1A|84618|5'-nucleotidase, cytosolic IA##NM_014571|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AF311885|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##EU446871|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AJ272215|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##BC006087|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##BC030827|HPCAL4|51440|hippocalcin like 4##AL136591|HPCAL4|51440|hippocalcin like 4##NM_016257|HPCAL4|51440|hippocalcin like 4##AK294412|HPCAL4|51440|hippocalcin like 4##AK312314|HPCAL4|51440|hippocalcin like 4##AK294813|HPCAL4|51440|hippocalcin like 4##NM_001195007|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_006112|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_203456|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK313666|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC008451|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AL833576|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104012|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104013|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK094660|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK304694|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC107736|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK130628|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK293094|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC004898|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##DQ160195|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)	0.976906	CTCF.p2:-1:0.977
chr14	106948008	106948124	reg1027128.p1	5.360	+	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	-9608	+	GQ232933 AY003798 FJ840151 FJ873995 EF407840 AM279492 AM279629 HM774186 AY957513 EF633772 AY062305 DQ524058 AF174122 AY944701 DQ065664 DQ065670 DQ065719 DQ065726 DQ926522 EF178118 EF633803 FJ385316 GU570332 HM995173 HM995251 HM995315 HM995321 HM995523 AB021518 AB021527 AF035043 AF471473 AJ579183 DQ535349 DQ535444 GU570331 GU570333 X95661 Z47231 BC092518 TSC_hg19_v1_chr14_-_106926725 BX647160 AK123783 AK097306 AK097329	-21507	-	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 AJ245014 AJ245018 AJ245021 AJ245023 AJ245024 AJ245030 AJ245033 AJ245034 AJ245038 AJ245056 AJ245060 AJ245061 AJ245071 AJ249629 AJ279514 AJ279515 AJ279525 AJ279530 AJ308449 AJ389175 AJ389176 AJ414019 AJ416561 AJ555264 AJ556674 AJ556675 AJ556676 AJ556691 AJ556693 AJ574781 AJ579117 AJ579126 AJ579130 AJ579131 AJ579134 AJ579138 AJ579166 AJ579168 AJ579169 AJ579170 AJ579179 AJ579200 AJ579202 AJ579205 AJ579209 AJ579210 AJ579214 AJ579244 AJ579245 AJ579292 AJ579293 AJ579297 AJ617569 AY165854 AY268372 AY268373 AY300037 AY577300 AY640552 AY670713 AY670734 AY670740 AY670742 AY670747 AY670751 AY670754 AY670758 AY670762 AY670771 AY670774 AY670799 AY670802 AY670805 AY670817 AY670822 AY670823 AY670825 AY670849 AY670850 AY670858 AY670859 AY670865 AY670874 AY670881 AY670894 AY670896 AY670897 AY670902 AY670914 AY670920 AY670922 AY670947 AY670950 AY670955 AY670960 AY670961 AY670970 AY670972 AY670978 AY670980 AY670986 AY670991 AY671017 AY671060 AY671089 AY671090 AY671101 AY671109 AY671112 AY671114 AY671119 AY671124 AY671126 AY671136 AY671137 AY671140 AY671146 AY671264 AY671318 AY671368 AY671369 AY671384 AY671392 AY671418 AY671433 AY671439 AY671482 AY671489 AY671517 AY671524 AY671534 AY671536 AY671545 AY671552 AY671560 AY671562 AY671563 AY671567 AY671572 AY671576 AY671578 AY671582 AY671583 AY671588 AY671598 AY671599 AY671600 AY671602 AY671616 AY671624 AY671626 AY671635 AY671638 AY671661 AY671672 AY671677 AY671681 AY671730 AY671736 AY671744 AY671752 AY671773 AY671774 AY671778 AY671780 AY671786 AY781849 AY885184 AY941931 AY941962 AY941975 AY960198 AY960201 AY971014 AY971044 AY971045 AY971080 AY971086 AY998723 DQ005257 DQ065676 DQ100673 DQ100687 DQ100701 DQ100784 DQ100821 DQ100822 DQ100824 DQ100825 DQ100897 DQ100953 DQ205162 DQ205173 DQ212518 DQ212520 DQ328872 DQ431572 DQ431610 DQ926162 DQ926290 DQ926291 DQ926302 DQ926317 DQ926323 DQ926515 DQ926519 DQ926521 DQ926608 FJ039783 FJ039790 FJ039791 FJ385371 FJ385402 FR820867 FR820868 FR820869 FR820870 FR820871 FR820872 FR820873 FR820875 GU570374 HM152512 HM152521 HQ689769 JN201901 L12190 L43117 U00494 U00566 U00571 U00578 U00581 U64496 U96278 U96280 U96285 U96287 U97243 X84336 X84339 Y08428 Y09249 Y09390 Z18316 Z46285 Z70608 Z70621 Z70622 Z70623 Z70631 Z70632 Z70654 Z70655 Z70656 Z70657 DQ926182 DQ926347 DQ926348 AY944695 DQ535289 DQ535393 DQ535427 DQ535433 DQ535456 EF177973 EF178111 EF178132 FJ385279 AJ579303 X54447 AY392937 X17678 S63731 X54437 Z14197 AY671021 AY670994 AY671000 AY671001 AY671009 AY671012 AY671016 AY671023 AY671031 AY671036 AY671054 AY671142 AY671197 AY671335 AY671182 AF013622 AY671048 AY671052 AY671159 AY671179 AY671239 AY671263 AY671276 AY671279 AY671282 AF013619 AF062204 AF062240 AF247737 AY671165 AY671185 AY671217 AY671297 AY671693 AY671723 AY671725 CU677619 EU937522 L23556 L38425 M99607 U86523 U86524 X65903 X65911 Z14198 Z75364 Z75388 AY671162 X52895 TSC_hg19_v1_chr14_-_106878091 X56158 M97921 AF417843 AK057754 AK057775 AK130529 BC025985 BX640824 AK130609 Z14206 AK126352 AK129514 AK129592 AK129637 AK130589 AK130611 BC016369 BX538077 BX648082 BX648874 Z14195 AK095222 AK303185	-70159	-	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	19234	-	BX640710 TSC_hg19_v1_chr14_-_106967543 AK097354 AK097357 L22586 AK092384 AK125238 AX747511 AK125703 AK092976 AX747834 AK097028 L06610	19501	-	GQ232968 DQ454715 DQ454740 DQ454804 FJ840179 GU552701 FJ840340 GQ232950 GQ232981 GU552754 DQ454538 DQ454540 DQ454585 DQ523858 GU552713 AY003858 DQ454386 DQ454541 DQ454621 DQ454676 GU552719 GU552720 GU552767 AY003800 EF566901 DQ454598 DQ454606 DQ454788 DQ455001 DQ454592 Z11947 FJ873823 FJ873826 FJ873839 FJ873846 FJ873864 FJ873876 FJ873933 FJ873992 HM116214 EF175393 AY003851 EF175424 EU350424 GU358679 JF810268 EU099085 EU099261 AY206990 AF103064 AM279530 HM996031 GQ903512 AF103334 AF062095 AF103183 AF103113 L07311 AF165109 AY062321 HM774774 JN110645 JN110658 JN110671 JN110688 JN110706 JN110718 FJ385349 HM774039 HM774378 HM774566 HM774910 HQ704000 HQ704008 HQ704009 AY062300 HM774238 HM775050 AF103319 AF194121 HM775049 DQ100804 EU146317 EU146347 EU146389 DQ100818 DQ100905 AJ006652 AF485463 AF485473 AY423189 AY423190 AY423196 AY423198 AY423199 AY423207 HM996483 AF103257 AY941883 DQ100909 AF006520 AJ249628 AY866746 DQ187712 DQ524024 GU570284 HM995016 HM995139 HM995190 HM995191 HM995236 HM995887 HM995889 HM995890 HM995891 HM995919 HM996054 HM996304 HM996511 AJ245323 AJ245324 DQ322799 DQ840839 DQ840841 DQ926120 DQ926247 DQ926326 AB374202 AF115123 AF174048 AJ245353 AJ245354 AJ245355 AJ278773 AY640567 AY866807 AY941926 AY944711 DQ100900 DQ100918 DQ926040 DQ926081 DQ926084 DQ926450 DQ926565 DQ926602 DQ926604 EU794403 Z18824 AB021525 AB063673 AB363090 AB363101 AB363126 AB363166 AF021949 AF021979 AF035023 AF052525 AF062215 AF062235 AF129457 AF174081 AF398962 AF408730 AF455546 AF455553 AF471175 AF471178 AF471201 AF471216 AF471265 AF471373 AF471475 AF471476 AF471477 AF471486 AF471490 AF471494 AF471528 AJ239363 AJ239370 AJ389190 AJ413993 AJ627249 AM040520 AM040566 AM259133 AM259134 AY466507 AY866733 AY866738 AY866759 AY866795 AY941854 AY941870 AY941906 AY941952 AY941974 AY941976 AY941980 AY962566 D83682 DQ065617 DQ205182 DQ212502 DQ212503 DQ535300 DQ535366 DQ535419 DQ535472 DQ926167 DQ926385 DQ926389 DQ926413 DQ926426 DQ926459 DQ926557 DQ926616 EF177950 EU549721 FJ492926 GQ903506 GU570336 GU570338 GU570341 HM152510 U00501 U77374 X59703 X87449 Z33898 Z96965 Z98722 AF283800 AJ519241 HM995874 AJ519332 L28051 AJ519250 AJ519294 AY392920 AY393056 L08082 AF062182 AF062206 AF062253 AF062285 AY190818 X81729 Z47218 TSC_hg19_v1_chr14_-_106994347 AK097076 AK097206 AK097859 AK126358 AK128664 AK130501 AK301358 BX640853 BX640854	46108	-	AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221##BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640710|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK097354|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097357|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK092384|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125238|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092976|IGHM|3507|immunoglobulin heavy constant mu##AK097028|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF035023|IGHV3-48|28424|immunoglobulin heavy variable 3-48##AK097076|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097859|IGHM|3507|immunoglobulin heavy constant mu##AK128664|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130501|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640854|IGH@|3492|immunoglobulin heavy locus	0.959384	CTCF.p2:11:0.959
chr15	41164224	41164404	reg1023766.p2	5.360	+	TSC_hg19_v1_chr15_+_41136676 NM_001032367 AK303899 BC004140 BT007425 CU676280 DQ890747 DQ892293 DQ895493	-27613	+	TSC_hg19_v1_chr15_+_41136245 AK314825 AK300195 NM_003710 NM_181642 BC018702 AY358969 AB000095 AY296715	-27964	+	AK000258 BC096716 BC098124 BC098150 BC098341 NM_001130143 NM_017726	-43409	-	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	2133	-	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	22386	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	57384	+	NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK000258|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC096716|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098124|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098150|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098341|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##NM_001130143|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##NM_017726|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)	0.0	
chr1	59250891	59251072	reg1028454.p1	5.360	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-1246	-	TSC_hg19_v1_chr1_-_59248287 BC009874	-2616	-	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-85229	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	511631	+	NM_001244714 AK054842	524772	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	1029671	+	BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##BC009874|JUN|3725|jun proto-oncogene##BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)	0.0	
chr18	4068691	4068791	reg1026377.p1	5.360	+	AK294777 AK294717 NM_001242762 NM_001242763	-194014	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	-194457	-	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	-223411	-	AK304101 TSC_hg19_v1_chr18_-_4455255	386512	-	AK316099 NM_001242761 NM_004746 TSC_hg19_v1_chr18_-_4455271	386529	-	TSC_hg19_v1_chr18_-_5197257 NM_001145194	1128511	-	AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK304101|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK316099|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242761|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_004746|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42	0.962582	CTCF.p2:7:0.963
chr22	50323462	50323642	reg1002601.p2	5.360	+	TSC_hg19_v1_chr22_+_50312337 BC050675 DQ470678 AK225930 AY358355 BC002894 DQ470676 DQ470677 DQ470680 AJ968414	-11177	+	TSC_hg19_v1_chr22_+_50312328 DQ470679 NM_001135101 NM_024324 AK308692 AK308535	-11248	+	TSC_hg19_v1_chr22_-_50312107 NM_024105	-11445	-	TSC_hg19_v1_chr22_+_50354140 NM_001001852 AB114795	30597	+	TSC_hg19_v1_chr22_+_50354433 AK292005 BC141855 BC052239 AB528933 BC140030	30959	+	NM_001001694 AK123987	127518	-	BC050675|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470678|CRELD2|79174|cysteine-rich with EGF-like domains 2##AK225930|CRELD2|79174|cysteine-rich with EGF-like domains 2##AY358355|CRELD2|79174|cysteine-rich with EGF-like domains 2##BC002894|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470676|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470677|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470680|CRELD2|79174|cysteine-rich with EGF-like domains 2##AJ968414|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470679|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_001135101|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_024324|CRELD2|79174|cysteine-rich with EGF-like domains 2##AK308535|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_024105|ALG12|79087|asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae)##NM_001001852|PIM3|415116|pim-3 oncogene##AB114795|PIM3|415116|pim-3 oncogene##AK292005|PIM3|415116|pim-3 oncogene##BC141855|PIM3|415116|pim-3 oncogene##BC052239|PIM3|415116|pim-3 oncogene##BC140030|PIM3|415116|pim-3 oncogene##NM_001001694|IL17REL|400935|interleukin 17 receptor E-like##AK123987|IL17REL|400935|interleukin 17 receptor E-like	0.010889	
chr3	58477629	58477725	reg1027108.p2	5.360	+	M34056 M19123 BC004115 AB528205 AM392999 AM393278 CR541911 CU674222 DQ891366 DQ894546 M34479 M34055 M54788 AB209241 AL117618 AK293153 BC000439 BC001924 TSC_hg19_v1_chr3_-_58419557 AK225569 AK311514 AK313022 J03576 X57778 AK225621 NM_000925 NM_001173468	-58195	-	TSC_hg19_v1_chr3_+_58318663 BC008943 AB209688 AK131385 AY437879 AK296215 BC014479 AY847220 AY847221 AY847222 AF399753 CU677017 DQ124707 DQ124708	-159003	+	TSC_hg19_v1_chr3_+_58318618 AY274811 NM_017771 AK000342 AK295542	-159064	+	TSC_hg19_v1_chr3_+_58477822 NM_001128214 AK075297	161	+	AK074934 NM_153331	6414	+	AK298402 AK313512 BC033517 BC047700 TSC_hg19_v1_chr3_-_58522918 NM_003500	45223	-	M34056|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M19123|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC004115|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM392999|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM393278|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##CR541911|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ891366|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ894546|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34479|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34055|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M54788|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AB209241|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AL117618|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK293153|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC000439|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC001924|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225569|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK311514|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK313022|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##J03576|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##X57778|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225621|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_000925|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_001173468|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC008943|PXK|54899|PX domain containing serine/threonine kinase##AB209688|PXK|54899|PX domain containing serine/threonine kinase##AK131385|PXK|54899|PX domain containing serine/threonine kinase##AY437879|PXK|54899|PX domain containing serine/threonine kinase##AK296215|PXK|54899|PX domain containing serine/threonine kinase##BC014479|PXK|54899|PX domain containing serine/threonine kinase##AY847220|PXK|54899|PX domain containing serine/threonine kinase##AY847221|PXK|54899|PX domain containing serine/threonine kinase##AY847222|PXK|54899|PX domain containing serine/threonine kinase##AF399753|PXK|54899|PX domain containing serine/threonine kinase##DQ124707|PXK|54899|PX domain containing serine/threonine kinase##DQ124708|PXK|54899|PX domain containing serine/threonine kinase##AY274811|PXK|54899|PX domain containing serine/threonine kinase##NM_017771|PXK|54899|PX domain containing serine/threonine kinase##AK000342|PXK|54899|PX domain containing serine/threonine kinase##AK295542|PXK|54899|PX domain containing serine/threonine kinase##NM_001128214|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK075297|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK074934|KCTD6|200845|potassium channel tetramerisation domain containing 6##NM_153331|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK298402|ACOX2|8309|acyl-CoA oxidase 2, branched chain##AK313512|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC033517|ACOX2|8309|acyl-CoA oxidase 2, branched chain##BC047700|ACOX2|8309|acyl-CoA oxidase 2, branched chain##NM_003500|ACOX2|8309|acyl-CoA oxidase 2, branched chain	0.400478	CTCF.p2:8:0.400
chr9	109917813	109917931	reg1020655.p1	5.360	+	TSC_hg19_v1_chr9_+_109686439 CR749850	-231403	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	-292508	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-1460954	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	127660	+	TSC_hg19_v1_chr9_+_110045559 AK125226 AK223479	127685	+	TSC_hg19_v1_chr9_+_110045567 D21090	127730	+	CR749850|ZNF462|58499|zinc finger protein 462##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK125226|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK223479|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##D21090|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.951671	CTCF.p2:24:0.952
chr10	98230028	98230153	reg1027371.p1	5.359	+	AF367761 NM_001040102 NM_001040103 NM_033207	-111016	-	NM_001017520 NM_004088 AB046378 AK313615 M26144 BC012920 AK223317 DQ891465 DQ894645	-165922	+	AM180327 AM180328 AM180329 AM180330 AM180331 AM180332 AM180333 AM180334 AM180335 AM180336 AM180337 AM180338 AM180339 AM180340 AM180341 AM180342 AM180343 AM180344 AM180345 AM180346 BC018906 BC110298 AK027779 AF068180 AF068181 AK225546 NM_001114094 NM_013314	-198847	-	AB384048 BC113577 BC112341 BC112366 AB023149 BC013871 BC030548 TSC_hg19_v1_chr10_-_98273674 AK026106 NM_012465	43473	-	AK075451 TSC_hg19_v1_chr10_-_98290333	60247	-	AK074824 TSC_hg19_v1_chr10_-_98321895	91770	-	AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal##NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal##AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal##AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal##M26144|DNTT|1791|deoxynucleotidyltransferase, terminal##BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal##AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal##AM180327|BLNK|29760|B-cell linker##AM180328|BLNK|29760|B-cell linker##AM180329|BLNK|29760|B-cell linker##AM180330|BLNK|29760|B-cell linker##AM180331|BLNK|29760|B-cell linker##AM180332|BLNK|29760|B-cell linker##AM180333|BLNK|29760|B-cell linker##AM180334|BLNK|29760|B-cell linker##AM180335|BLNK|29760|B-cell linker##AM180336|BLNK|29760|B-cell linker##AM180337|BLNK|29760|B-cell linker##AM180338|BLNK|29760|B-cell linker##AM180339|BLNK|29760|B-cell linker##AM180340|BLNK|29760|B-cell linker##AM180341|BLNK|29760|B-cell linker##AM180342|BLNK|29760|B-cell linker##AM180343|BLNK|29760|B-cell linker##AM180344|BLNK|29760|B-cell linker##AM180345|BLNK|29760|B-cell linker##AM180346|BLNK|29760|B-cell linker##BC018906|BLNK|29760|B-cell linker##BC110298|BLNK|29760|B-cell linker##AK027779|BLNK|29760|B-cell linker##AF068180|BLNK|29760|B-cell linker##AF068181|BLNK|29760|B-cell linker##AK225546|BLNK|29760|B-cell linker##NM_001114094|BLNK|29760|B-cell linker##NM_013314|BLNK|29760|B-cell linker##BC113577|TLL2|7093|tolloid-like 2##BC112341|TLL2|7093|tolloid-like 2##BC112366|TLL2|7093|tolloid-like 2##AB023149|TLL2|7093|tolloid-like 2##BC013871|TLL2|7093|tolloid-like 2##BC030548|TLL2|7093|tolloid-like 2##AK026106|TLL2|7093|tolloid-like 2##NM_012465|TLL2|7093|tolloid-like 2##AK075451|TM9SF3|56889|transmembrane 9 superfamily member 3##AK074824|TM9SF3|56889|transmembrane 9 superfamily member 3	0.034606	
chr1	112301161	112301278	reg1027076.p2	5.359	+	TSC_hg19_v1_chr1_+_112298524 AK301697 AK001506 BC031062 BC011556 AF106019 AF155803 AK314312 DQ892249 DQ895449 CU679958	-2670	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	-2784	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	-3000	+	AY863198 AF120491 NM_004980 NM_172198	230503	-	NM_018704 TSC_hg19_v1_chr1_+_112938844 AK023340	637607	+	TSC_hg19_v1_chr1_+_112938871 BC016029 AK022544 AK092791 AX747733	637649	+	AK301697|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK001506|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC031062|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC011556|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF106019|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF155803|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK314312|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ892249|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ895449|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF120491|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_004980|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_172198|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like##BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK092791|LOC100129406|100129406|uncharacterized LOC100129406	0.703094	CTCF.p2:-16:0.703
chr4	33062691	33062805	reg1025718.p1	5.359	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-2340289	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-2340554	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-2340749	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	3183289	-	AK131492 NM_001136536 AK304357 AK316523	3220498	+	BC157885 NM_001170700	3222895	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.849939	CTCF.p2:13:0.850
chrX	47420889	47421070	reg1025839.p2	5.359	+	NM_001654 X04790 TSC_hg19_v1_chrX_+_47420605 AB208831 AK300975 AK130043 AK297453 AK307747 BC002466 BC007514	-412	+	BC015023 NM_007130 NM_153380	-78635	-	U28687 NM_003446 BC075003 AB528013 EU446919	-190956	+	TSC_hg19_v1_chrX_+_47441773 NM_003254 AK074854 AK296116 BC000866 BC007097	20744	+	TSC_hg19_v1_chrX_+_47441834 X03124 M12670 AK310206 AK311937 AK307222 M59906 X02598	20844	+	TSC_hg19_v1_chrX_-_47479098 AB591026	58133	-	NM_001654|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##X04790|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AB208831|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK300975|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK130043|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK297453|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK307747|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC002466|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC007514|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC015023|ZNF41|7592|zinc finger protein 41##NM_007130|ZNF41|7592|zinc finger protein 41##NM_153380|ZNF41|7592|zinc finger protein 41##U28687|ZNF157|7712|zinc finger protein 157##NM_003446|ZNF157|7712|zinc finger protein 157##BC075003|ZNF157|7712|zinc finger protein 157##EU446919|ZNF157|7712|zinc finger protein 157##NM_003254|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK074854|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK296116|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC000866|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC007097|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X03124|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M12670|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK310206|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK311937|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M59906|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X02598|TIMP1|7076|TIMP metallopeptidase inhibitor 1	0.0	
chr12	6579753	6579848	reg1026999.p1	5.358	+	NM_018009 TSC_hg19_v1_chr12_+_6561272 BC015017 AK223163 AK001005 AK002056 AK222956 AK098035 HQ258015	-18506	+	AK315732 NM_001242 BC012160 M63928 DQ892296 EU176659 AB590221 CU680244	-25654	+	TSC_hg19_v1_chr12_+_6493333 AK095418 BC026262 AK027080 L04270 NM_002342 AB527559 DQ891995 DQ895185 CU693188	-86428	+	TSC_hg19_v1_chr12_-_6579844 AF060538 BC023286 AK289498 AK296294 AK303137 AK309184 NM_014231 NM_016830 NM_199245	14	-	BC000191 TSC_hg19_v1_chr12_-_6602417 BC014329 AB049959 AF151075 AF212248 NM_016497	22644	-	TSC_hg19_v1_chr12_+_6602542 D63880 BC016913	22749	+	NM_018009|TAPBPL|55080|TAP binding protein-like##BC015017|TAPBPL|55080|TAP binding protein-like##AK223163|TAPBPL|55080|TAP binding protein-like##AK001005|TAPBPL|55080|TAP binding protein-like##AK002056|TAPBPL|55080|TAP binding protein-like##AK222956|TAPBPL|55080|TAP binding protein-like##AK098035|TAPBPL|55080|TAP binding protein-like##HQ258015|TAPBPL|55080|TAP binding protein-like##AK315732|CD27|939|CD27 molecule##NM_001242|CD27|939|CD27 molecule##BC012160|CD27|939|CD27 molecule##M63928|CD27|939|CD27 molecule##DQ892296|CD27|939|CD27 molecule##EU176659|CD27|939|CD27 molecule##AK095418|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##BC026262|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK027080|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##L04270|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##NM_002342|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ891995|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ895185|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AF060538|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC023286|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK289498|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK296294|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK303137|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK309184|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_014231|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_016830|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_199245|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC000191|MRPL51|51258|mitochondrial ribosomal protein L51##BC014329|MRPL51|51258|mitochondrial ribosomal protein L51##AB049959|MRPL51|51258|mitochondrial ribosomal protein L51##AF151075|MRPL51|51258|mitochondrial ribosomal protein L51##AF212248|MRPL51|51258|mitochondrial ribosomal protein L51##NM_016497|MRPL51|51258|mitochondrial ribosomal protein L51##D63880|NCAPD2|9918|non-SMC condensin I complex, subunit D2##BC016913|NCAPD2|9918|non-SMC condensin I complex, subunit D2	0.0	
chr14	77575171	77575306	reg1028978.p1	5.358	+	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	-10593	+	AK124327 TSC_hg19_v1_chr14_-_77542533	-32705	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-80178	-	BC117676 TSC_hg19_v1_chr14_-_77608072	32777	-	AK294840 TSC_hg19_v1_chr14_-_77608135 AK095612 NM_174976	32897	-	TSC_hg19_v1_chr14_+_77648082 NM_020431	72854	+	NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK294840|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK095612|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_174976|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_020431|TMEM63C|57156|transmembrane protein 63C	0.0	
chr17	45356654	45356794	reg1022582.p2	5.358	+	TSC_hg19_v1_chr17_+_45331260 AK300424	-25466	+	AY826979 TSC_hg19_v1_chr17_+_45331224 AB587392 U95204	-25500	+	TSC_hg19_v1_chr17_+_45331192 BC127666 BC127667 J02703 NM_000212 M35999 M20311	-25540	+	BC044604 TSC_hg19_v1_chr17_+_45401141	44417	+	TSC_hg19_v1_chr17_+_45401357 NM_001195192 NM_152347 BC036407 BC037876	44608	+	TSC_hg19_v1_chr17_-_45569837 BC090855 BC067758	213120	-	AY826979|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##U95204|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127666|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127667|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##J02703|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##NM_000212|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M35999|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M20311|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC044604|C17orf57|124989|chromosome 17 open reading frame 57##NM_001195192|C17orf57|124989|chromosome 17 open reading frame 57##NM_152347|C17orf57|124989|chromosome 17 open reading frame 57##BC036407|C17orf57|124989|chromosome 17 open reading frame 57##BC037876|C17orf57|124989|chromosome 17 open reading frame 57##BC090855|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2##BC067758|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2	0.0	
chr17	72858488	72858607	reg1023636.p1	5.358	+	BC140801 BC144586 AB208799 NM_000835	-2602	-	AL137521 BC037584 TSC_hg19_v1_chr17_+_72832152	-26439	+	NM_017728 AK291159 TSC_hg19_v1_chr17_+_72772637 AK296621 AK000262 AK074029 BC011552 BC037278	-85891	+	BT006684 CU678312 AB463633 AK223530 J03826 AK098648 AK293210 AK301779 BC063493 BC002960 AK298908 AK094120 AK293208 BC018911 BC034763 BC011521 AK295307 NM_004110 NM_024417	10564	-	NM_178128 AY203929 BC117230 AK094411	31174	-	BC101096 BC101097 BC101098 BC101099 AK091243 AK296899 AX746872 NM_173477 AK289804	60752	-	BC140801|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##BC144586|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##AB208799|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##NM_000835|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##AL137521|TMEM104|54868|transmembrane protein 104##NM_017728|TMEM104|54868|transmembrane protein 104##AK291159|TMEM104|54868|transmembrane protein 104##AK296621|TMEM104|54868|transmembrane protein 104##AK000262|TMEM104|54868|transmembrane protein 104##AK074029|TMEM104|54868|transmembrane protein 104##BC011552|TMEM104|54868|transmembrane protein 104##BC037278|TMEM104|54868|transmembrane protein 104##BT006684|FDXR|2232|ferredoxin reductase##AK223530|FDXR|2232|ferredoxin reductase##J03826|FDXR|2232|ferredoxin reductase##AK098648|FDXR|2232|ferredoxin reductase##AK293210|FDXR|2232|ferredoxin reductase##AK301779|FDXR|2232|ferredoxin reductase##BC063493|FDXR|2232|ferredoxin reductase##BC002960|FDXR|2232|ferredoxin reductase##AK298908|FDXR|2232|ferredoxin reductase##AK094120|FDXR|2232|ferredoxin reductase##AK293208|FDXR|2232|ferredoxin reductase##BC018911|FDXR|2232|ferredoxin reductase##BC034763|FDXR|2232|ferredoxin reductase##BC011521|FDXR|2232|ferredoxin reductase##AK295307|FDXR|2232|ferredoxin reductase##NM_004110|FDXR|2232|ferredoxin reductase##NM_024417|FDXR|2232|ferredoxin reductase##NM_178128|FADS6|283985|fatty acid desaturase domain family, member 6##AY203929|FADS6|283985|fatty acid desaturase domain family, member 6##BC117230|FADS6|283985|fatty acid desaturase domain family, member 6##AK094411|FADS6|283985|fatty acid desaturase domain family, member 6##BC101096|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101097|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101098|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101099|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK091243|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK296899|USH1G|124590|Usher syndrome 1G (autosomal recessive)##NM_173477|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK289804|USH1G|124590|Usher syndrome 1G (autosomal recessive)	0.99272	CTCF.p2:-8:0.983
chr20	15635029	15635133	reg1006030.p2	5.358	+	BC018687 NM_001033087	-457578	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-1316825	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-1658745	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	918932	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	1075582	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	1093940	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	0.289397	
chr2	13186849	13186948	reg1023646.p1	5.358	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-328501	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	-328982	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-329645	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	1585923	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	1585953	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	2514531	-	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence	0.87226	CTCF.p2:-23:0.872
chr2	172304297	172304477	reg1027681.p1	5.358	+	TSC_hg19_v1_chr2_-_172291283 AK292108 NM_024770 AK297141	-13102	-	TSC_hg19_v1_chr2_+_172290837 BC140843 BC144653	-13479	+	TSC_hg19_v1_chr2_+_172290824 CR933646	-13576	+	TSC_hg19_v1_chr2_-_172374248 AB055776	69859	-	AK301485 TSC_hg19_v1_chr2_+_172378762	74372	+	TSC_hg19_v1_chr2_+_172379020 NM_001127383 NM_024843 AK128495 AK316588 AL136693 BC016900 AK291731 AK027115 AK225459 BC065290 HQ257890	74568	+	AK292108|METTL8|79828|methyltransferase like 8##NM_024770|METTL8|79828|methyltransferase like 8##AK297141|METTL8|79828|methyltransferase like 8##BC140843|DCAF17|80067|DDB1 and CUL4 associated factor 17##BC144653|DCAF17|80067|DDB1 and CUL4 associated factor 17##CR933646|DCAF17|80067|DDB1 and CUL4 associated factor 17##AK301485|CYBRD1|79901|cytochrome b reductase 1##NM_001127383|CYBRD1|79901|cytochrome b reductase 1##NM_024843|CYBRD1|79901|cytochrome b reductase 1##AK128495|CYBRD1|79901|cytochrome b reductase 1##AK316588|CYBRD1|79901|cytochrome b reductase 1##AL136693|CYBRD1|79901|cytochrome b reductase 1##BC016900|CYBRD1|79901|cytochrome b reductase 1##AK291731|CYBRD1|79901|cytochrome b reductase 1##AK027115|CYBRD1|79901|cytochrome b reductase 1##AK225459|CYBRD1|79901|cytochrome b reductase 1##BC065290|CYBRD1|79901|cytochrome b reductase 1##HQ257890|CYBRD1|79901|cytochrome b reductase 1	0.954013	CTCF.p2:-14:0.954
chr2	228344927	228345064	reg1025970.p2	5.358	+	TSC_hg19_v1_chr2_+_228336877 NM_001135187 NM_001135188 NM_001135189 NM_004504 BC030592 X89478 BC096272 BC096273 BC096274 BC096275 AB527534 CU688928	-7989	+	TSC_hg19_v1_chr2_+_228336861 AK097451	-8153	+	AY358671 BC137256 BC137257 BC035754 TSC_hg19_v1_chr2_-_228244023 AK026453 NM_024795	-100981	-	TSC_hg19_v1_chr2_+_228356287 AK295030	11296	+	AM393148 AM393273 BC131618 AL359944 CR749679 AK055355 NM_001162483 NM_020161	152923	-	AF271633 BC032014 AK301490 AF283317 AK312464 NM_025243	237726	-	NM_001135187|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135188|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135189|AGFG1|3267|ArfGAP with FG repeats 1##NM_004504|AGFG1|3267|ArfGAP with FG repeats 1##BC030592|AGFG1|3267|ArfGAP with FG repeats 1##X89478|AGFG1|3267|ArfGAP with FG repeats 1##BC096272|AGFG1|3267|ArfGAP with FG repeats 1##BC096273|AGFG1|3267|ArfGAP with FG repeats 1##BC096274|AGFG1|3267|ArfGAP with FG repeats 1##BC096275|AGFG1|3267|ArfGAP with FG repeats 1##AK097451|AGFG1|3267|ArfGAP with FG repeats 1##AY358671|TM4SF20|79853|transmembrane 4 L six family member 20##BC137256|TM4SF20|79853|transmembrane 4 L six family member 20##BC137257|TM4SF20|79853|transmembrane 4 L six family member 20##BC035754|TM4SF20|79853|transmembrane 4 L six family member 20##AK026453|TM4SF20|79853|transmembrane 4 L six family member 20##NM_024795|TM4SF20|79853|transmembrane 4 L six family member 20##AK295030|AGFG1|3267|ArfGAP with FG repeats 1##AM393148|C2orf83|56918|chromosome 2 open reading frame 83##AM393273|C2orf83|56918|chromosome 2 open reading frame 83##BC131618|C2orf83|56918|chromosome 2 open reading frame 83##AL359944|C2orf83|56918|chromosome 2 open reading frame 83##CR749679|C2orf83|56918|chromosome 2 open reading frame 83##AK055355|C2orf83|56918|chromosome 2 open reading frame 83##NM_001162483|C2orf83|56918|chromosome 2 open reading frame 83##NM_020161|C2orf83|56918|chromosome 2 open reading frame 83##AF271633|SLC19A3|80704|solute carrier family 19, member 3##BC032014|SLC19A3|80704|solute carrier family 19, member 3##AK301490|SLC19A3|80704|solute carrier family 19, member 3##AF283317|SLC19A3|80704|solute carrier family 19, member 3##AK312464|SLC19A3|80704|solute carrier family 19, member 3##NM_025243|SLC19A3|80704|solute carrier family 19, member 3	0.023413	
chr6_ssto_hap7	4252630	4252735	reg1027649.p2	5.358	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.08447	
chr10	11078537	11078652	reg1029931.p1	5.357	+	U69546 TSC_hg19_v1_chr10_+_11060121	-18478	+	AF090694 TSC_hg19_v1_chr10_+_11060072	-18523	+	TSC_hg19_v1_chr10_+_11059882 AK314087 NM_006561 BC036391	-18704	+	AK299983 NM_001025076 NM_001083591 TSC_hg19_v1_chr10_+_11207008	128375	+	AK297313 TSC_hg19_v1_chr10_+_11207057 AK299992 AF036956 AK293164 AF432906	128502	+	TSC_hg19_v1_chr10_+_11207244 AK316354	128651	+	U69546|CELF2|10659|CUGBP, Elav-like family member 2##AF090694|CELF2|10659|CUGBP, Elav-like family member 2##AK314087|CELF2|10659|CUGBP, Elav-like family member 2##NM_006561|CELF2|10659|CUGBP, Elav-like family member 2##BC036391|CELF2|10659|CUGBP, Elav-like family member 2##AK299983|CELF2|10659|CUGBP, Elav-like family member 2##NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2##NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2##AK297313|CELF2|10659|CUGBP, Elav-like family member 2##AK299992|CELF2|10659|CUGBP, Elav-like family member 2##AF036956|CELF2|10659|CUGBP, Elav-like family member 2##AK293164|CELF2|10659|CUGBP, Elav-like family member 2##AF432906|CELF2|10659|CUGBP, Elav-like family member 2##AK316354|CELF2|10659|CUGBP, Elav-like family member 2	0.987275	CTCF.p2:-3:0.987
chr1	160912792	160912945	reg1027255.p1	5.357	+	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	-57910	-	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	-80290	-	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	-146870	+	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	11691	-	BT020103 CR533512 DQ892228 DQ895428 EU831648 EU831732 AB528601 AF207907 AK304412 TSC_hg19_v1_chr1_-_160990931 BC001533 AY358896 AK026665 AF154005 AK075152 AL136649	78030	-	TSC_hg19_v1_chr1_-_160990981 NM_016946	78183	-	AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2##BT020103|F11R|50848|F11 receptor##CR533512|F11R|50848|F11 receptor##DQ892228|F11R|50848|F11 receptor##DQ895428|F11R|50848|F11 receptor##EU831648|F11R|50848|F11 receptor##EU831732|F11R|50848|F11 receptor##AF207907|F11R|50848|F11 receptor##AK304412|F11R|50848|F11 receptor##BC001533|F11R|50848|F11 receptor##AY358896|F11R|50848|F11 receptor##AK026665|F11R|50848|F11 receptor##AF154005|F11R|50848|F11 receptor##AK075152|F11R|50848|F11 receptor##AL136649|F11R|50848|F11 receptor##NM_016946|F11R|50848|F11 receptor	0.426115	CTCF.p2:-8:0.426
chr15	64679843	64680007	reg1024136.p1	5.357	+	AF529370 AY598324 AB463081 CU675545 BC005832 D14657 BC007101 TSC_hg19_v1_chr15_-_64673641 AK290748 BC016782 NM_001029989 NM_014736	-6290	-	TSC_hg19_v1_chr15_-_64648373 AK225960 NM_022048	-31525	-	BC130613 BC136504 AL832551 TSC_hg19_v1_chr15_-_64648283	-31657	-	NM_016213 TSC_hg19_v1_chr15_+_64680041 BC012448 AK314319 AB464298 EU446746	111	+	TSC_hg19_v1_chr15_+_64752786 BC142647	72934	+	NM_015042	111693	+	AF529370|KIAA0101|9768|KIAA0101##AY598324|KIAA0101|9768|KIAA0101##BC005832|KIAA0101|9768|KIAA0101##D14657|KIAA0101|9768|KIAA0101##BC007101|KIAA0101|9768|KIAA0101##AK290748|KIAA0101|9768|KIAA0101##BC016782|KIAA0101|9768|KIAA0101##NM_001029989|KIAA0101|9768|KIAA0101##NM_014736|KIAA0101|9768|KIAA0101##AK225960|CSNK1G1|53944|casein kinase 1, gamma 1##NM_022048|CSNK1G1|53944|casein kinase 1, gamma 1##BC130613|CSNK1G1|53944|casein kinase 1, gamma 1##BC136504|CSNK1G1|53944|casein kinase 1, gamma 1##AL832551|CSNK1G1|53944|casein kinase 1, gamma 1##NM_016213|TRIP4|9325|thyroid hormone receptor interactor 4##BC012448|TRIP4|9325|thyroid hormone receptor interactor 4##AK314319|TRIP4|9325|thyroid hormone receptor interactor 4##EU446746|TRIP4|9325|thyroid hormone receptor interactor 4##BC142647|ZNF609|23060|zinc finger protein 609##NM_015042|ZNF609|23060|zinc finger protein 609	0.209407	CTCF.p2:-60:0.209
chr16	2954265	2954374	reg1024904.p1	5.357	+	NM_001142499 NM_001142500 NM_138439 TSC_hg19_v1_chr16_+_2933215 BC014089	-21063	+	CU679465 AB010779 AF321182 BC009726 AY358396 NM_022119	-46182	-	NM_145252 AY359021 JN411265 BC009722 AB528168 AM392915 AM393869 EF067313 AK311810	-74081	+	TSC_hg19_v1_chr16_+_2961983 BC028572 NM_020912 NM_032296	7645	+	TSC_hg19_v1_chr16_+_2961994 AB046772	7678	+	BC009383 NM_001253725 NM_001253726 NM_024507 NM_172229 AK075033 AK301953 AK027669 BC003533 AK223422 AB086355 AB086356 AB086357 AB086405 DQ896447	60049	+	NM_001142499|FLYWCH2|114984|FLYWCH family member 2##NM_001142500|FLYWCH2|114984|FLYWCH family member 2##NM_138439|FLYWCH2|114984|FLYWCH family member 2##BC014089|FLYWCH2|114984|FLYWCH family member 2##AB010779|PRSS22|64063|protease, serine, 22##AF321182|PRSS22|64063|protease, serine, 22##BC009726|PRSS22|64063|protease, serine, 22##AY358396|PRSS22|64063|protease, serine, 22##NM_022119|PRSS22|64063|protease, serine, 22##NM_145252|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AY359021|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##JN411265|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC009722|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM392915|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM393869|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##EF067313|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AK311810|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC028572|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_020912|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_032296|FLYWCH1|84256|FLYWCH-type zinc finger 1##AB046772|FLYWCH1|84256|FLYWCH-type zinc finger 1##BC009383|KREMEN2|79412|kringle containing transmembrane protein 2##NM_001253725|KREMEN2|79412|kringle containing transmembrane protein 2##NM_001253726|KREMEN2|79412|kringle containing transmembrane protein 2##NM_024507|KREMEN2|79412|kringle containing transmembrane protein 2##NM_172229|KREMEN2|79412|kringle containing transmembrane protein 2##AK075033|KREMEN2|79412|kringle containing transmembrane protein 2##AK301953|KREMEN2|79412|kringle containing transmembrane protein 2##AK027669|KREMEN2|79412|kringle containing transmembrane protein 2##BC003533|KREMEN2|79412|kringle containing transmembrane protein 2##AK223422|KREMEN2|79412|kringle containing transmembrane protein 2##AB086355|KREMEN2|79412|kringle containing transmembrane protein 2##AB086356|KREMEN2|79412|kringle containing transmembrane protein 2##AB086357|KREMEN2|79412|kringle containing transmembrane protein 2##AB086405|KREMEN2|79412|kringle containing transmembrane protein 2##DQ896447|KREMEN2|79412|kringle containing transmembrane protein 2	0.65663	CTCF.p2:26:0.657
chr20	47603581	47603691	reg1028744.p1	5.357	+	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	-65318	+	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	-159197	-	AB037836 TSC_hg19_v1_chr20_-_47444291	-159350	-	TSC_hg19_v1_chr20_+_47662853 BC108309 NM_001316 AF053641 U33286 AK312306 AK307965 AK297270 AK297314 AK298477 AK300589 BC109313 BC109314	59190	+	TSC_hg19_v1_chr20_+_47662875 AF053640	59252	+	TSC_hg19_v1_chr20_-_47804876 AK292859 BC001893 BC010169 AY529074 AK291487 BC007532 AK057739 AK025519 BC095397 AL136601	201150	-	BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC108309|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##NM_001316|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053641|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##U33286|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK312306|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK307965|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297270|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK298477|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK300589|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109313|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053640|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK292859|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC001893|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC010169|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AY529074|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK291487|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC007532|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK057739|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK025519|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC095397|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AL136601|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)	0.863685	CTCF.p2:1:0.864
chr4	4509835	4509947	reg1026855.p2	5.357	+	TSC_hg19_v1_chr4_+_4388828 AK299657 AK312288 AK301911	-121072	+	TSC_hg19_v1_chr4_+_4388753 AX775767 BC001745	-121147	+	AK125172 NM_001040101 NM_014392	-121909	+	AY453396 BT007150 BT020135 CU677069 AB028741 BC014613 BC071980 TSC_hg19_v1_chr4_-_4543708	33813	-	TSC_hg19_v1_chr4_-_4543741 AK310026	33840	-	TSC_hg19_v1_chr4_-_4543750 NM_016930	33870	-	AK299657|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK312288|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK301911|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##BC001745|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AK125172|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##NM_001040101|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##NM_014392|D4S234E|27065|DNA segment on chromosome 4 (unique) 234 expressed sequence##AY453396|STX18|53407|syntaxin 18##BT007150|STX18|53407|syntaxin 18##BT020135|STX18|53407|syntaxin 18##AB028741|STX18|53407|syntaxin 18##BC014613|STX18|53407|syntaxin 18##BC071980|STX18|53407|syntaxin 18##AK310026|STX18|53407|syntaxin 18##NM_016930|STX18|53407|syntaxin 18	0.0	
chr1	26612479	26612612	reg1003128.p3	5.356	+	TSC_hg19_v1_chr1_+_26606633 DQ893377 DQ896698	-5914	+	TSC_hg19_v1_chr1_+_26606589 AK024884 AF304163	-5947	+	TSC_hg19_v1_chr1_+_26606583 AJ297915	-5964	+	AY007163 TSC_hg19_v1_chr1_-_26633128 AF521018 AK291503 AF520989 AF521017 AK090792 AX746618 AK293910 CR749413 AK094198 AK296179 BX647774 BX648412 BC038106 AK093258 AX748018 NM_001077262 NM_183008	20607	-	TSC_hg19_v1_chr1_+_26644396 NM_001803 AK311554	31855	+	TSC_hg19_v1_chr1_+_26644458 BC000644 X62466 X67699 BT007116 CR456874	31938	+	DQ893377|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##DQ896698|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AK024884|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AF304163|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AJ297915|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AY007163|UBXN11|91544|UBX domain protein 11##AF521018|UBXN11|91544|UBX domain protein 11##AK291503|UBXN11|91544|UBX domain protein 11##AF520989|UBXN11|91544|UBX domain protein 11##AF521017|UBXN11|91544|UBX domain protein 11##AK090792|UBXN11|91544|UBX domain protein 11##AK293910|UBXN11|91544|UBX domain protein 11##CR749413|UBXN11|91544|UBX domain protein 11##AK094198|UBXN11|91544|UBX domain protein 11##AK296179|UBXN11|91544|UBX domain protein 11##BX647774|UBXN11|91544|UBX domain protein 11##BX648412|UBXN11|91544|UBX domain protein 11##BC038106|UBXN11|91544|UBX domain protein 11##AK093258|UBXN11|91544|UBX domain protein 11##NM_001077262|UBXN11|91544|UBX domain protein 11##NM_183008|UBXN11|91544|UBX domain protein 11##NM_001803|CD52|1043|CD52 molecule##BC000644|CD52|1043|CD52 molecule##X62466|CD52|1043|CD52 molecule##X67699|CD52|1043|CD52 molecule##BT007116|CD52|1043|CD52 molecule##CR456874|CD52|1043|CD52 molecule	0.0	
chr15	100879335	100879441	reg1024465.p2	5.356	+	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-605754	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-605784	-	TSC_hg19_v1_chr15_-_100273591 BC084545 AK124852	-605822	-	AB527357 AJ315735 NM_139057	2755	-	BC034500 BC034970 NM_178842	205509	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	263021	-	BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC084545|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK124852|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)	0.0	
chr18	38109581	38109723	reg1026493.p1	5.356	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-729384	-	TSC_hg19_v1_chr18_-_36915657 D28405	-1193996	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	-2963653	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	1425547	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	1425581	+	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	2585917	-	AK090603|LOC647946|647946|uncharacterized LOC647946##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2	0.154095	
chr20	39521486	39521627	reg1026962.p1	5.356	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-203679	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-1930567	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-1966488	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	135938	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	136108	+	TSC_hg19_v1_chr20_+_39765861 AB210028	244306	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.04442	
chr2	131113693	131113818	reg1026273.p2	5.356	+	NM_001142370 NM_014369 TSC_hg19_v1_chr2_+_131113598 BC031076 BC024280 BC041562 BC052800 X79568 AK303804 CU690934	-105	+	TSC_hg19_v1_chr2_+_131100487 BC010042 NM_033416	-13269	+	TSC_hg19_v1_chr2_+_131100469 AK289878 AK292345 AK312808	-13287	+	NM_001079530 AK315326 AK290094 NM_032545 BC146897 BC110080 BC069508 BC074825 BC074826 AF312769	165083	+	CU686866 AF312769 BC074825 BC074826 BC069508 BC110080 BC146897 NM_032545 AK290094 AK315326 NM_001079530	243299	-	BC105013 BC105041 NM_207364 AY569570 AY280965	372928	+	NM_001142370|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##NM_014369|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC031076|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC024280|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC041562|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC052800|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##X79568|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##AK303804|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC010042|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_033416|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK289878|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK292345|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK312808|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##BC105013|GPR148|344561|G protein-coupled receptor 148##BC105041|GPR148|344561|G protein-coupled receptor 148##NM_207364|GPR148|344561|G protein-coupled receptor 148##AY569570|GPR148|344561|G protein-coupled receptor 148##AY280965|GPR148|344561|G protein-coupled receptor 148	0.945868	CTCF.p2:-9:0.946
chr2	198175535	198175630	reg1022214.p4	5.356	+	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	-63	-	TSC_hg19_v1_chr2_-_198175459 BC063622	-109	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	-200	-	AF054284 TSC_hg19_v1_chr2_-_198299735 BC039020 AF086296 BC064335	124147	-	BC046140 BC107883 TSC_hg19_v1_chr2_-_198299753 AK290470 BC029418 BC015530	124169	-	BC056155 AK308122 TSC_hg19_v1_chr2_-_198299772 NM_001005526 NM_012433 AK294851	124203	-	BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##AK124039|ANKRD44|91526|ankyrin repeat domain 44##AF054284|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC039020|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AF086296|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC064335|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC046140|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC107883|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AK290470|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC029418|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC015530|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC056155|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AK308122|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##NM_001005526|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##NM_012433|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AK294851|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	0.021507	
chr4	20249845	20249964	reg1025081.p1	5.356	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-2226438	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-2437293	+	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	-2437631	-	AB017168 NM_004787 BC117190 BC143978 AF133270	5432	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	452163	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	735725	-	AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16##AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4	0.998148	CTCF.p2:6:0.998
chr5	133463142	133463307	reg1028078.p2	5.356	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	-11863	+	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	-12705	+	AK095989 NM_003374	-122401	-	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	49399	-	TSC_hg19_v1_chr5_-_133512642 Z47087 BC020798 NM_006930 NM_170679	49458	-	AB451240 AB451365 CR457417 AB385080 X12646 TSC_hg19_v1_chr5_-_133561733 J03804	98420	-	NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1##Z47087|SKP1|6500|S-phase kinase-associated protein 1##BC020798|SKP1|6500|S-phase kinase-associated protein 1##NM_006930|SKP1|6500|S-phase kinase-associated protein 1##NM_170679|SKP1|6500|S-phase kinase-associated protein 1##AB451240|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AB451365|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##CR457417|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##X12646|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##J03804|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme	0.0	
chr8	57389554	57389624	reg1022586.p2	5.356	+	BC107706 TSC_hg19_v1_chr8_-_57359201 AK309758 AK314908 NM_001135690	-30360	-	CR541808 CR541828 DQ890865 DQ890871 DQ894027 BC032505 NM_006211	-31038	-	TSC_hg19_v1_chr8_+_57358383 AK091563 AX747062	-31217	+	AY032885 TSC_hg19_v1_chr8_-_57906227	516667	-	TSC_hg19_v1_chr8_-_57906381 BC017797	516789	-	BC067814 TSC_hg19_v1_chr8_-_57906402	516813	-	BC107706|PENK|5179|proenkephalin##AK314908|PENK|5179|proenkephalin##NM_001135690|PENK|5179|proenkephalin##CR541808|PENK|5179|proenkephalin##CR541828|PENK|5179|proenkephalin##DQ890865|PENK|5179|proenkephalin##DQ890871|PENK|5179|proenkephalin##DQ894027|PENK|5179|proenkephalin##BC032505|PENK|5179|proenkephalin##NM_006211|PENK|5179|proenkephalin##AY032885|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1	0.0	
chr13	52027072	52027172	reg1023861.p1	5.355	+	AX772926 NM_001101320 AM402969	-111927	+	TSC_hg19_v1_chr13_+_51796507 BC034497 NM_001242312 NM_145019 AK055269 AK096364 BC051771 AB527542 CU690842	-230606	+	BC001397 BC005088 BC007332 BC010174 TSC_hg19_v1_chr13_+_51484193	-542965	+	AF097645 BC039829 BC018725 BC013358 BC032386 TSC_hg19_v1_chr13_-_52027173 AK296801 AK304218	31	-	NM_001039937 NM_001039938 NM_012141 AL833524 TSC_hg19_v1_chr13_-_52027409	220	-	TSC_hg19_v1_chr13_+_52027481 BC030118 BC045725	351	+	AX772926|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##NM_001101320|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AM402969|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##BC034497|FAM124A|220108|family with sequence similarity 124A##NM_001242312|FAM124A|220108|family with sequence similarity 124A##NM_145019|FAM124A|220108|family with sequence similarity 124A##AK055269|FAM124A|220108|family with sequence similarity 124A##AK096364|FAM124A|220108|family with sequence similarity 124A##BC051771|FAM124A|220108|family with sequence similarity 124A##BC001397|RNASEH2B|79621|ribonuclease H2, subunit B##BC005088|RNASEH2B|79621|ribonuclease H2, subunit B##BC007332|RNASEH2B|79621|ribonuclease H2, subunit B##BC010174|RNASEH2B|79621|ribonuclease H2, subunit B##AF097645|INTS6|26512|integrator complex subunit 6##BC039829|INTS6|26512|integrator complex subunit 6##BC018725|INTS6|26512|integrator complex subunit 6##BC013358|INTS6|26512|integrator complex subunit 6##BC032386|INTS6|26512|integrator complex subunit 6##AK296801|INTS6|26512|integrator complex subunit 6##AK304218|INTS6|26512|integrator complex subunit 6##NM_001039937|INTS6|26512|integrator complex subunit 6##NM_001039938|INTS6|26512|integrator complex subunit 6##NM_012141|INTS6|26512|integrator complex subunit 6##AL833524|INTS6|26512|integrator complex subunit 6	0.0	
chr10	64370714	64370894	reg1002077.p2	5.354	+	AJ505150 NM_199452	-90598	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-236761	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-342265	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	193738	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	193853	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	205293	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.0	
chr11	80718176	80718354	reg1025234.p1	5.354	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-1566541	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-2432370	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-2432473	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	1726633	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	1893252	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	1894509	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.992884	CTCF.p2:25:0.993
chr12	27124986	27125145	reg1024793.p1	5.354	+	NM_001171887 NM_001171888 NM_015633 AK001534 TSC_hg19_v1_chr12_+_27091402 BC032143 AF161472	-33690	+	TSC_hg19_v1_chr12_-_27091213 NM_018164	-33835	-	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	-34156	-	TSC_hg19_v1_chr12_-_27167274 AK002031 AB032470 BC005176	42093	-	TSC_hg19_v1_chr12_-_27167318 AK023085	42256	-	TSC_hg19_v1_chr12_-_27167332 NM_016551	42270	-	NM_001171887|FGFR1OP2|26127|FGFR1 oncogene partner 2##NM_001171888|FGFR1OP2|26127|FGFR1 oncogene partner 2##NM_015633|FGFR1OP2|26127|FGFR1 oncogene partner 2##AK001534|FGFR1OP2|26127|FGFR1 oncogene partner 2##BC032143|FGFR1OP2|26127|FGFR1 oncogene partner 2##AF161472|FGFR1OP2|26127|FGFR1 oncogene partner 2##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK002031|TM7SF3|51768|transmembrane 7 superfamily member 3##AB032470|TM7SF3|51768|transmembrane 7 superfamily member 3##BC005176|TM7SF3|51768|transmembrane 7 superfamily member 3##AK023085|TM7SF3|51768|transmembrane 7 superfamily member 3##NM_016551|TM7SF3|51768|transmembrane 7 superfamily member 3	0.012932	
chr15	93374991	93375171	reg1027738.p1	5.354	+	BC110328 TSC_hg19_v1_chr15_-_93277463	-97692	-	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	-176202	-	AK057393 NM_153040	-360175	+	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	68405	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	68499	+	AK295909 TSC_hg19_v1_chr15_+_93447798	72679	+	BC110328|FAM174B|400451|family with sequence similarity 174, member B##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2##AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2	0.0	
chr22	25506993	25507141	reg1025743.p1	5.354	+	BC171801 NM_001145206	-83127	+	BC130647 BC130649 CR456388 NM_001001663	-171755	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-304857	+	TSC_hg19_v1_chr22_+_25591072 AK025418	84062	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	88777	+	NM_000496	108544	+	BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AK025418|KIAA1671|85379|KIAA1671##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##NM_000496|CRYBB2|1415|crystallin, beta B2	0.384726	CTCF.p2:8:0.385
chrX	109389881	109390011	reg1025697.p2	5.354	+	TSC_hg19_v1_chrX_+_109246360 BC085605	-143591	+	TSC_hg19_v1_chrX_+_109246341 NM_032227 AK026332	-143606	+	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	-144076	+	CU687440 TSC_hg19_v1_chrX_-_109561311 AK314596 BC060813	171359	-	TSC_hg19_v1_chrX_-_109561314 BX648797 NM_001025580 NM_015365	171400	-	TSC_hg19_v1_chrX_-_109561428 AJ007014	171500	-	BC085605|TMEM164|84187|transmembrane protein 164##NM_032227|TMEM164|84187|transmembrane protein 164##AK026332|TMEM164|84187|transmembrane protein 164##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164##AK314596|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC060813|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BX648797|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001025580|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_015365|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1	0.997842	CTCF.p2:29:0.998
chr13	111805625	111805758	reg1026614.p1	5.353	+	TSC_hg19_v1_chr13_+_111767658 BC060776 NM_001113511 NM_001113512 NM_145735 BC033905 AL834228 CU687414 CU689800 EU832819 GQ129214	-37962	+	AK000100 NM_017664 TSC_hg19_v1_chr13_-_111567417	-238275	-	TSC_hg19_v1_chr13_-_111567375 BC001727 AK096083 BC039715	-238326	-	AK300157 TSC_hg19_v1_chr13_+_111806035	345	+	TSC_hg19_v1_chr13_+_111806041 AB177849 NM_003899	360	+	TSC_hg19_v1_chr13_+_111806070 D63476	387	+	BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK000100|ANKRD10|55608|ankyrin repeat domain 10##NM_017664|ANKRD10|55608|ankyrin repeat domain 10##BC001727|ANKRD10|55608|ankyrin repeat domain 10##AK096083|ANKRD10|55608|ankyrin repeat domain 10##BC039715|ANKRD10|55608|ankyrin repeat domain 10##AK300157|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AB177849|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_003899|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##D63476|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	0.0	
chr14	107113615	107113715	reg1027273.p2	5.353	+	S76904 AM279575 EU619960 JN110911 JN111008 HM774600 HM774602 AF103144 AF103285 AY866748 AY866803 DQ187673 DQ187733 DQ322974 DQ840851 DQ840858 DQ840864 AF006522 AF233250 AF471440 EF177980 EU835549 AB063812 AJ399808 AJ579268 DQ205169 DQ535364 DQ535448 DQ926460 Z98683 Z98702 AJ519260 AJ519262 AJ519304 AY392915 AF062171 TSC_hg19_v1_chr14_-_107099662 AK097355 AK097366 AK093636 AK097572 AX748235	-14142	-	AF460776 EF583680 DQ454729 DQ454436 HM995491 DQ454495 DQ454638 DQ454782 DQ523857 DQ454730 DQ454735 DQ454736 DQ454850 DQ454463 DQ454626 DQ454634 DQ454779 AY003758 DQ454909 AY003782 DQ454387 DQ454439 DQ454443 DQ454491 DQ454630 DQ454640 DQ454657 DQ454658 DQ454693 DQ454996 DQ523865 DQ523866 DQ523904 DQ523907 GU552723 GU552763 DQ454683 DQ454954 AY003756 AY003861 DQ454803 DQ454883 DQ454908 DQ454931 DQ454981 Z30558 Z30559 Z30575 Z30577 Z30579 Z30673 DQ454894 HM995480 DQ454567 DQ454586 DQ454595 DQ454611 DQ454623 DQ454649 DQ454661 DQ454790 DQ454858 DQ454930 DQ454940 DQ523860 M18514 AY003863 AY003854 DQ454390 DQ454444 DQ454650 DQ454684 DQ454709 DQ454717 DQ454721 DQ454733 DQ454737 DQ454855 DQ454887 DQ454933 DQ454936 DQ454963 DQ454984 DQ454994 DQ523863 DQ454447 DQ454504 DQ454539 DQ454596 DQ454609 DQ454613 DQ454619 DQ454633 DQ454656 DQ454672 DQ454720 DQ454886 DQ454942 DQ454972 DQ454977 HM116187 DQ454605 DQ454646 DQ454702 DQ454703 DQ454851 HM116123 HM116135 HM116139 HM116144 HM116147 HM116154 HM116217 AY003860 DQ454602 DQ454880 DQ454822 DQ454825 EF091925 EF175400 EF175422 EF175440 EF583671 EU667610 EU814956 GQ232848 GQ232850 GQ232880 DQ454435 EU099241 EU099155 EU099196 AY577297 AY393172 DQ523932 DQ524057 EU099215 EU099224 AM183980 AY393168 AY393171 AY393176 AY393177 AY393178 AM279541 AF103075 AF103349 AF103054 AY180386 AF103162 FJ385403 JN110682 JN110887 AF103140 FJ385332 FJ385336 FJ385376 FJ385404 FJ385416 FJ385417 FJ385421 GQ504863 L26904 AF103343 AF103091 EU620035 AF103271 EU146313 U00585 EU620063 DQ926547 AY062314 U00553 U00557 AF103164 AF103228 DQ005270 HM995488 AY671631 HM996467 AJ245067 DQ523945 DQ523951 DQ523954 DQ523969 DQ523970 DQ523977 DQ523979 DQ524002 DQ524011 DQ524015 DQ524019 DQ524040 DQ524042 DQ524043 DQ524052 DQ524055 DQ524072 DQ524087 DQ524090 DQ524092 DQ524099 DQ524100 DQ524104 DQ524108 DQ524110 DQ524124 DQ524133 AM233755 DQ926051 DQ926252 AB067262 AJ300799 AY671719 AY941873 AY944692 AY944703 AY944704 AY944722 DQ005289 DQ005293 DQ005305 EF178085 FJ385391 HM995323 HM995324 HM995327 HM995330 HM995345 HM995347 HM995388 HM995403 HM995478 HM995483 HM995484 HM995485 HM995486 HM995487 HM995498 HM995499 HM995500 HM995502 HM995534 HM995551 HM995556 HM995557 HM995559 HM995560 HM995932 HM995933 HM995957 HM995994 HM996010 HM996122 HM996155 HM996464 HM996496 AB063721 AB063723 AB063729 AB063744 AB063787 AB063920 AB066903 AB066912 AB066913 AB067270 AB067272 AB067275 AB067296 AF021963 AF035041 AF062230 AF174018 AF174072 AF174080 AF174097 AF174119 AJ006351 AJ239343 AJ244983 AJ245027 AJ413991 AJ413998 AJ413999 AJ574780 AM279612 AY345917 AY640510 AY670733 AY670744 AY670820 AY670910 AY670915 AY670930 AY670942 AY670967 AY670984 AY671004 AY671056 AY671062 AY671072 AY671075 AY671076 AY671082 AY671085 AY671088 AY671194 AY671221 AY671255 AY671326 AY671337 AY671343 AY671346 AY671353 AY671356 AY671359 AY671373 AY671376 AY671378 AY671394 AY671456 AY671457 AY671458 AY671459 AY671460 AY671463 AY671467 AY671470 AY671472 AY671473 AY671476 AY671485 AY671488 AY671493 AY671494 AY671575 AY671588 AY671589 AY671601 AY671606 AY671628 AY671645 AY671666 AY671667 AY671674 AY671692 AY671710 AY671715 AY671717 AY671759 AY866865 AY986386 AY986387 AY986388 AY986389 AY986390 DQ005263 DQ005287 DQ005288 DQ100795 DQ328873 DQ431484 DQ431485 DQ926085 DQ926130 DQ926178 DQ926219 DQ926256 DQ926258 DQ926290 DQ926310 DQ926368 DQ926395 DQ926514 DQ926572 DQ926640 DQ926644 EU794431 FJ385318 FJ456850 GU570380 GU570382 HQ378396 HQ689744 JF806450 L12189 L12197 L23516 L23517 L23563 S73508 U00486 U00493 U31937 U43927 U51549 U95241 U96283 X98749 Z70613 Z70615 Z70628 Z70629 Z70651 Z70652 Z70653 Z70658 Z74672 Z74674 Z74681 Z74682 Z74683 Z74684 Z74685 Z74686 Z74687 Z74688 Z74689 Z74690 DQ926105 AY686879 AY944715 DQ535399 DQ535425 DQ535434 DQ535441 DQ535468 DQ535469 DQ535474 EF177985 EF178038 EF178125 HM996104 HM996425 HM996431 HM996435 Z14199 Z75403 AY392942 AY393076 AY393081 AY393082 Z47242 AY671167 AF062106 AF062108 AF062109 AF062126 AF062129 AF062132 AF062144 AF062166 AF062185 AF062209 AF062228 AF062252 AF062266 AY671032 AY671186 AY671196 AY671241 AY671258 AY671290 AY671296 M88500 S46247 U44791 U86525 X52111 Z11958 Z47349 Z75395 M18518 BC066594 S50735 TSC_hg19_v1_chr14_-_107083721 AK097365 X67906 X69860 X69866 AK097362 BX248300 AK125079	-30088	-	DQ454429 DQ454922 HM116180 EF091913 EF175413 GQ232868 GQ232976 EF583666 EF407827 EF407822 AJ007320 AF308556 AF103132 HM774392 HQ703981 JN110710 JN111102 HM774550 AY393601 AY393649 AY393679 EU099114 EU099216 DQ100711 AB066834 AF174037 AY050706 DQ005304 FJ492918 HM994925 HQ689790 Z80842 DQ524125 DQ535395 HQ378413 DQ100675 HM996225 AB067078 AY866569 AY971062 DQ065681 DQ926239 EF028212 HM994895 HM994932 HM994933 HM994938 HM994946 HM994963 HM994965 HM995218 HM995258 HM995267 HM995314 HM996512 HM996546 AF021955 GU570262 AF062174 AF062225 AF062279 TSC_hg19_v1_chr14_-_107078867	-34940	-	DQ454926 GU552751 DQ523845 DQ454743 DQ454741 FJ873884 FJ873949 FJ874082 DQ454745 AY003790 EU350425 EU667608 EF407835 DQ454756 DQ454758 DQ322814 AF343367 AF343413 AF103266 AJ007443 AF103288 FJ385341 AF103034 AF103338 AF062236 JN110970 L03820 HM774324 HM774398 HM774726 HM774904 HM774928 L33041 HM775043 AF408742 AF485449 AF078936 AF485451 AF485453 AF485455 EF633815 DQ524036 DQ524153 DQ926062 HM995709 HM995710 HM995711 HM995712 HM995713 HM995863 HM995864 HM995866 DQ322813 HM996268 AJ245306 AY044149 DQ100802 DQ100910 DQ926129 AB063797 AB063898 AB063899 AF022008 AF099199 AF398961 AF471517 AF471518 AF471519 AF471520 AJ224899 AJ399811 AY554175 AY640527 DQ065678 DQ535356 DQ779565 DQ779566 FJ385288 FN563805 FN563806 FN563810 FN563812 FN563827 FN563828 HQ689733 JF806286 X77017 L48239 AY392926 AY393064 AY452138 X65898 X81752 X81753 BC073782 AF067420 TSC_hg19_v1_chr14_-_107114275 AK097071	444	-	AF103081 JN110643 JN110687 GQ504895 GQ504960 HM774028 HM774358 HM774582 HM774889 X98961 AF165107 AY423163 AF485471 AF485473 AJ306675 AY423172 FN563800 EF633801 HM994977 HM994995 HM995120 HM995247 HM995290 HM995392 HM995519 HM995754 HM995991 HM996039 HM996369 AY866776 DQ322973 DQ926438 AF471404 AJ245345 AJ401162 AM279604 AY866777 DQ100932 DQ100975 DQ926053 DQ926476 GU570357 L19914 Z96976 AB067024 AB067127 AB363182 AB373619 AF231404 AF471217 AF471316 AF471319 AF471331 AF471353 AJ519231 AJ556646 AJ556650 AY640562 AY866705 AY866733 AY971141 DQ065617 DQ065721 DQ100842 DQ535272 DQ535332 DQ926279 EF633803 EF633809 EF633824 EF633825 FJ385293 FJ492933 FN563769 FN563801 FN563814 FN563817 FN563830 FN563831 L38018 Y08405 Y08406 Z96975 Z98724 AJ519258 AJ519228 AJ519314 AJ519323 AJ519243 AJ519280 AJ519310 AJ519335 AJ519268 AJ519313 X62126 TSC_hg19_v1_chr14_-_107122620	8824	-	GQ232991 EU814957 AY003867 GQ233006 AY003724 AY003757 FJ840009 GU552709 AY003791 FJ840366 JF810271 FJ840139 FJ874031 AF017464 HM774748 HM775002 HQ704029 DQ524134 DQ840815 DQ840856 AY530312 AY941926 AY986399 DQ100849 AB067106 AB363089 DQ535377 U00563 U64502 AY392909 AY393069 AY393070 AF062111 AF062168 X81739 X81750 Z14221 TSC_hg19_v1_chr14_-_107131555 AK097017 AK128476 AK130433	17724	-	AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK097366|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC066594|IGH@|3492|immunoglobulin heavy locus##AK097365|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097362|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125079|IGH@|3492|immunoglobulin heavy locus##BC073782|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF067420|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097017|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130433|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.864496	CTCF.p2:2:0.864
chr2	210442216	210442347	reg1024543.p1	5.353	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	-153527	+	BC036811 NM_005048 U25128 HQ257935 AY497546	-1170620	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-1217656	+	BC110423 TSC_hg19_v1_chr2_+_210444185	1889	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	2113	+	TSC_hg19_v1_chr2_+_210636707 AK090815 AX746629 NM_032504 NM_182587	194427	+	NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##AK294181|PTH2R|5746|parathyroid hormone 2 receptor##BC110423|MAP2|4133|microtubule-associated protein 2##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2##AK090815|UNC80|285175|unc-80 homolog (C. elegans)##NM_032504|UNC80|285175|unc-80 homolog (C. elegans)##NM_182587|UNC80|285175|unc-80 homolog (C. elegans)	0.878417	CTCF.p2:12:0.878
chr14	67993575	67993755	reg1009315.p2	5.352	+	NM_182526 TSC_hg19_v1_chr14_-_67982162 AK090706 AX746582	-11555	-	TSC_hg19_v1_chr14_-_67878872 BC001226	-114794	-	BC008056 AB528314 DQ891238 DQ894423 TSC_hg19_v1_chr14_-_67878843 AF228603 NM_016445	-114854	-	AK307428 NM_020715 TSC_hg19_v1_chr14_+_68000028 AB033026 BC146787	6308	+	BT006804 CU678574 BC071849 BC004100 L19783 AK314108 AK293584 NM_004569	73302	-	TSC_hg19_v1_chr14_+_68086582 BC029050 NM_001172	92924	+	NM_182526|TMEM229B|161145|transmembrane protein 229B##AK090706|TMEM229B|161145|transmembrane protein 229B##BC001226|PLEK2|26499|pleckstrin 2##BC008056|PLEK2|26499|pleckstrin 2##DQ891238|PLEK2|26499|pleckstrin 2##DQ894423|PLEK2|26499|pleckstrin 2##AF228603|PLEK2|26499|pleckstrin 2##NM_016445|PLEK2|26499|pleckstrin 2##AK307428|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##NM_020715|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##AB033026|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##BC146787|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##BT006804|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC071849|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC004100|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##L19783|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##AK314108|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##NM_004569|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC029050|ARG2|384|arginase, type II##NM_001172|ARG2|384|arginase, type II	0.014372	
chr2	174151091	174151259	reg1027764.p2	5.352	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	-210527	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	-210629	+	AB208974 TSC_hg19_v1_chr2_+_173940455	-210727	+	TSC_hg19_v1_chr2_+_174219599 AY029179 NM_031942 NM_145810 AK027642 AK027628 BC027966 AK075134 AK297097 AK300949 AK297245 AL834186 CU693352 AB527763	68438	+	AK023489 TSC_hg19_v1_chr2_-_174767427	616179	-	X68560 TSC_hg19_v1_chr2_-_174828559 M97191	677372	-	AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AB208974|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AY029179|CDCA7|83879|cell division cycle associated 7##NM_031942|CDCA7|83879|cell division cycle associated 7##NM_145810|CDCA7|83879|cell division cycle associated 7##AK027642|CDCA7|83879|cell division cycle associated 7##AK027628|CDCA7|83879|cell division cycle associated 7##BC027966|CDCA7|83879|cell division cycle associated 7##AK075134|CDCA7|83879|cell division cycle associated 7##AK297097|CDCA7|83879|cell division cycle associated 7##AK300949|CDCA7|83879|cell division cycle associated 7##AK297245|CDCA7|83879|cell division cycle associated 7##AL834186|CDCA7|83879|cell division cycle associated 7##X68560|SP3|6670|Sp3 transcription factor##M97191|SP3|6670|Sp3 transcription factor	0.023553	
chr2	188312934	188313107	reg1023750.p1	5.352	+	DQ280491 U17473 L76380 AK291630 AK292998 DQ280490 NM_005795	-74	-	AK128006 BC031094 NM_182521	-599124	-	TSC_hg19_v1_chr2_+_187558788 AK091423 AK289737 AX746973 BC060872 NM_177454 AF361495 CU687488	-754244	+	J03225 AF021834 TSC_hg19_v1_chr2_-_188419163 AK313562 BC015514 BC014332	106090	-	TSC_hg19_v1_chr2_-_188419185 NM_001032281 NM_006287	106181	-	AK055718 NM_001252668 NM_001252669 NM_016315 TSC_hg19_v1_chr2_+_189156445	843405	+	DQ280491|CALCRL|10203|calcitonin receptor-like##U17473|CALCRL|10203|calcitonin receptor-like##L76380|CALCRL|10203|calcitonin receptor-like##AK291630|CALCRL|10203|calcitonin receptor-like##AK292998|CALCRL|10203|calcitonin receptor-like##NM_005795|CALCRL|10203|calcitonin receptor-like##AK128006|ZSWIM2|151112|zinc finger, SWIM-type containing 2##BC031094|ZSWIM2|151112|zinc finger, SWIM-type containing 2##NM_182521|ZSWIM2|151112|zinc finger, SWIM-type containing 2##AK091423|FAM171B|165215|family with sequence similarity 171, member B##AK289737|FAM171B|165215|family with sequence similarity 171, member B##BC060872|FAM171B|165215|family with sequence similarity 171, member B##NM_177454|FAM171B|165215|family with sequence similarity 171, member B##AF361495|FAM171B|165215|family with sequence similarity 171, member B##J03225|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AF021834|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK313562|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC015514|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC014332|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK055718|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252668|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252669|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_016315|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	0.0	
chr4	26721697	26721848	reg1026841.p1	5.352	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-136092	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-229787	-	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	-399090	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	140768	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	4000227	+	AB006757 TSC_hg19_v1_chr4_+_30722198	4000422	+	NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7	0.03684	
chr6	141630583	141630697	reg1027778.p2	5.352	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-1934856	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-1934879	-	NM_001168389 NM_001168388	-1935217	-	BC095542 GU727635 M73482 NM_002511	779224	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	837750	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	837766	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.014754	
chr7	134563685	134563821	reg1025243.p1	5.352	+	TSC_hg19_v1_chr7_+_134464419 BC040354	-99331	+	TSC_hg19_v1_chr7_+_134464387 AK298524 AK304729 AF247820 M83216	-99364	+	TSC_hg19_v1_chr7_+_134464170 NM_004342 NM_033138 NM_033157 AK289686	-99587	+	NM_033139 NM_033140 TSC_hg19_v1_chr7_+_134576161	12402	+	BC014035 TSC_hg19_v1_chr7_+_134576197 BC061926 BC005006 D90452 D90453	12520	+	TSC_hg19_v1_chr7_+_134671258 AK302827 NM_178563 BC030651 AL832281 AK023045 AK311252	107532	+	BC040354|CALD1|800|caldesmon 1##AK298524|CALD1|800|caldesmon 1##AK304729|CALD1|800|caldesmon 1##AF247820|CALD1|800|caldesmon 1##M83216|CALD1|800|caldesmon 1##NM_004342|CALD1|800|caldesmon 1##NM_033138|CALD1|800|caldesmon 1##NM_033157|CALD1|800|caldesmon 1##AK289686|CALD1|800|caldesmon 1##NM_033139|CALD1|800|caldesmon 1##NM_033140|CALD1|800|caldesmon 1##BC014035|CALD1|800|caldesmon 1##BC061926|CALD1|800|caldesmon 1##BC005006|CALD1|800|caldesmon 1##D90452|CALD1|800|caldesmon 1##D90453|CALD1|800|caldesmon 1##AK302827|AGBL3|340351|ATP/GTP binding protein-like 3##NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3##BC030651|AGBL3|340351|ATP/GTP binding protein-like 3##AL832281|AGBL3|340351|ATP/GTP binding protein-like 3##AK023045|AGBL3|340351|ATP/GTP binding protein-like 3	0.04695	
chr8	134842775	134842872	reg1026965.p1	5.352	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-258726	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-533326	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-639493	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	865971	-	TSC_hg19_v1_chr8_-_135725053 AB463359	882256	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	882451	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.024647	
chr8	146011110	146011242	reg1026335.p2	5.352	+	TSC_hg19_v1_chr8_-_145980977 NM_138367	-30202	-	TSC_hg19_v1_chr8_-_145980846 AK000435	-30322	-	TSC_hg19_v1_chr8_-_145911232 AK296353	-99949	-	TSC_hg19_v1_chr8_-_146012703 BC004480 AL833814 AK096508 NM_030580	1524	-	TSC_hg19_v1_chr8_-_146017753 BC012197 NM_033301 BC013104 BC000077	6564	-	AK301073 D28421 TSC_hg19_v1_chr8_-_146017776	6600	-	NM_138367|ZNF251|90987|zinc finger protein 251##AK000435|ZNF251|90987|zinc finger protein 251##AK296353|ARHGAP39|80728|Rho GTPase activating protein 39##BC004480|ZNF34|80778|zinc finger protein 34##AL833814|ZNF34|80778|zinc finger protein 34##AK096508|ZNF34|80778|zinc finger protein 34##NM_030580|ZNF34|80778|zinc finger protein 34##BC012197|RPL8|6132|ribosomal protein L8##NM_033301|RPL8|6132|ribosomal protein L8##BC013104|RPL8|6132|ribosomal protein L8##BC000077|RPL8|6132|ribosomal protein L8##AK301073|RPL8|6132|ribosomal protein L8	0.0	
chr14	95565435	95565603	reg1025819.p1	5.351	+	AB463695 BC063580 AY177407 NM_173849	-329095	-	NM_001085 TSC_hg19_v1_chr14_+_95078727 AK123091 AK308565 BC070265 BC003559 AB209060 BC010530 BC034554 AY513275 AY513276	-486783	+	TSC_hg19_v1_chr14_+_95047798 AK293192 BC008915 AK096131	-517713	+	AB590557 HM595745 NM_001195573	34297	-	AB028449 NM_030621	42535	-	AY929254 AY929255 AY929256 TSC_hg19_v1_chr14_-_95623633	58103	-	BC063580|GSC|145258|goosecoid homeobox##AY177407|GSC|145258|goosecoid homeobox##NM_173849|GSC|145258|goosecoid homeobox##NM_001085|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AK123091|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC070265|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC003559|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AB209060|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC010530|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC034554|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AY513275|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AY513276|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AK293192|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##BC008915|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##AK096131|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##HM595745|DICER1|23405|dicer 1, ribonuclease type III##NM_001195573|DICER1|23405|dicer 1, ribonuclease type III##AB028449|DICER1|23405|dicer 1, ribonuclease type III##NM_030621|DICER1|23405|dicer 1, ribonuclease type III##AY929254|DICER1|23405|dicer 1, ribonuclease type III##AY929255|DICER1|23405|dicer 1, ribonuclease type III##AY929256|DICER1|23405|dicer 1, ribonuclease type III	0.996681	CTCF.p2:6:0.997
chr17	78075188	78075279	reg1025622.p2	5.351	+	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	-64785	+	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	-65631	-	BC044939 TSC_hg19_v1_chr17_+_77893233	-182034	+	TSC_hg19_v1_chr17_+_78075349 NM_000152 NM_001079803 NM_001079804	93	+	AK299462 TSC_hg19_v1_chr17_+_78075368	131	+	TSC_hg19_v1_chr17_+_78075395 BC040431 BC065262 Y00839	237	+	NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_000152|GAA|2548|glucosidase, alpha; acid##NM_001079803|GAA|2548|glucosidase, alpha; acid##NM_001079804|GAA|2548|glucosidase, alpha; acid##AK299462|GAA|2548|glucosidase, alpha; acid##BC040431|GAA|2548|glucosidase, alpha; acid##Y00839|GAA|2548|glucosidase, alpha; acid	0.41965	CTCF.p2:14:0.302
chr1	9749082	9749263	reg1021658.p1	5.351	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	-37368	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-100216	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-149536	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	134723	-	TSC_hg19_v1_chr1_-_9884023 AK304813	134849	-	TSC_hg19_v1_chr1_-_9884024 BC033902	134872	-	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1	0.0	
chr2	119884281	119884401	reg1025736.p1	5.351	+	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	-184521	+	NM_001426	-278583	-	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-1038278	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	32063	-	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	97044	+	TSC_hg19_v1_chr2_+_119981409 AF423424 AK001691 AY029585 AY214461 BX538047 AK291608 AF238864 AF262322 AY082673 BC095421 BC042150	97086	+	BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##NM_001426|EN1|2019|engrailed homeobox 1##AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase##AF423424|STEAP3|55240|STEAP family member 3, metalloreductase##AK001691|STEAP3|55240|STEAP family member 3, metalloreductase##AY029585|STEAP3|55240|STEAP family member 3, metalloreductase##AY214461|STEAP3|55240|STEAP family member 3, metalloreductase##BX538047|STEAP3|55240|STEAP family member 3, metalloreductase##AK291608|STEAP3|55240|STEAP family member 3, metalloreductase##AF238864|STEAP3|55240|STEAP family member 3, metalloreductase##AF262322|STEAP3|55240|STEAP family member 3, metalloreductase##AY082673|STEAP3|55240|STEAP family member 3, metalloreductase##BC095421|STEAP3|55240|STEAP family member 3, metalloreductase##BC042150|STEAP3|55240|STEAP family member 3, metalloreductase	0.983934	CTCF.p2:-4:0.984
chr21	43860688	43860849	reg1025321.p2	5.351	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-36756	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-44607	-	M12075 BC032811 NM_003225 X00474 X52003	-74146	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	55612	-	AJ269529 NM_018964	58973	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	73235	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.0	
chr2	153323547	153323721	reg1025169.p1	5.351	+	BC113878 BC114438 TSC_hg19_v1_chr2_+_153191857 AB067489 BC167159 AB385514	-131661	+	TSC_hg19_v1_chr2_+_153191687 NM_052905	-131964	+	TSC_hg19_v1_chr2_-_153032266 AB463258 AM393419 CU688564 DQ892427 DQ895641 AK292265 AK292847 AK310863 AF042273 AF042274 AL133600 BC022277 BC028740 NM_005843	-291284	-	TSC_hg19_v1_chr2_-_153573924 U70667 AF049524 AF049528 BC000273 BC073138 BC011788 AF049523 AK298547 AK024810 BC029414 NM_017892	250286	-	TSC_hg19_v1_chr2_+_153574392 NM_152522 AK023109	250814	+	TSC_hg19_v1_chr2_+_153575123 AK315657	251481	+	BC113878|FMNL2|114793|formin-like 2##BC114438|FMNL2|114793|formin-like 2##AB067489|FMNL2|114793|formin-like 2##BC167159|FMNL2|114793|formin-like 2##NM_052905|FMNL2|114793|formin-like 2##AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_152522|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK023109|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK315657|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6	0.0	
chr8	103057350	103057522	reg1027858.p1	5.351	+	NM_032041	-253998	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-254236	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-254253	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	79087	-	NM_001040630	79698	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	193737	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.0	
chr8	102996911	102997092	reg1024436.p2	5.350	+	NM_032041	-193563	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-193801	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-193818	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	139522	-	NM_001040630	140133	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	254172	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.0	
chrX	155049929	155050057	reg1026565.p1	5.350	+	AK289543 AK311508 NM_005840 AK125483	-52559	+	AF373407 BC025269 BC009673 TSC_hg19_v1_chrX_-_154842563 AK291694 AK001589 NM_001184797 NM_018196	-207437	-	BC101409 BC101415 BC101417 BC101418 CR542230 NM_001017991 BC134365 HQ258044 AF254576 NM_001017990 NM_080720 BC130510 BC130512	-360368	-	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	60998	+	M84747 NM_002186 AK303178 BC025298 BC051337 S71404 CU690808	177348	+	None	None	None	AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)##AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon##BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon##BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon##AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon##AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon##NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon##NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon##BC101409|H2AFB2|474381|H2A histone family, member B2##BC101415|H2AFB3|83740|H2A histone family, member B3##BC101417|H2AFB3|83740|H2A histone family, member B3##BC101418|H2AFB3|83740|H2A histone family, member B3##CR542230|H2AFB1|474382|H2A histone family, member B1##NM_001017991|H2AFB2|474381|H2A histone family, member B2##BC134365|H2AFB2|474381|H2A histone family, member B2##HQ258044|H2AFB3|83740|H2A histone family, member B3##AF254576|H2AFB3|83740|H2A histone family, member B3##NM_001017990|H2AFB1|474382|H2A histone family, member B1##NM_080720|H2AFB3|83740|H2A histone family, member B3##BC130510|H2AFB3|83740|H2A histone family, member B3##BC130512|H2AFB3|83740|H2A histone family, member B3##NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7##M84747|IL9R|3581|interleukin 9 receptor##NM_002186|IL9R|3581|interleukin 9 receptor##AK303178|IL9R|3581|interleukin 9 receptor##BC025298|IL9R|3581|interleukin 9 receptor##BC051337|IL9R|3581|interleukin 9 receptor##S71404|IL9R|3581|interleukin 9 receptor	0.053577	
chr16	89724419	89724599	reg1023759.p1	5.349	+	TSC_hg19_v1_chr16_+_89724475 AK125673	-39	+	TSC_hg19_v1_chr16_+_89724243 AK056168 BC148299 NM_153025 AK128803 AK303024 BC045670	-273	+	TSC_hg19_v1_chr16_-_89724128 NM_001083314 NM_002768 U58048	-320	-	TSC_hg19_v1_chr16_+_89753087 AK298386 NM_001098533 NM_001160367 NM_052987 NM_052988 AK075036 L33264 AK295397	28570	+	TSC_hg19_v1_chr16_+_89753098 AB209829 BC017342 AK292351 BC093028 AK296631 AK290485 AF153430 AK312016 BC025301 BC032704	28600	+	TSC_hg19_v1_chr16_-_89768114 BC039608 BC053588 BC027606 NM_152339	43610	-	AK125673|C16orf55|124045|chromosome 16 open reading frame 55##AK056168|C16orf55|124045|chromosome 16 open reading frame 55##BC148299|C16orf55|124045|chromosome 16 open reading frame 55##NM_153025|C16orf55|124045|chromosome 16 open reading frame 55##AK128803|C16orf55|124045|chromosome 16 open reading frame 55##AK303024|C16orf55|124045|chromosome 16 open reading frame 55##BC045670|C16orf55|124045|chromosome 16 open reading frame 55##NM_001083314|CHMP1A|5119|charged multivesicular body protein 1A##NM_002768|CHMP1A|5119|charged multivesicular body protein 1A##U58048|CHMP1A|5119|charged multivesicular body protein 1A##AK298386|CDK10|8558|cyclin-dependent kinase 10##NM_001098533|CDK10|8558|cyclin-dependent kinase 10##NM_001160367|CDK10|8558|cyclin-dependent kinase 10##NM_052987|CDK10|8558|cyclin-dependent kinase 10##NM_052988|CDK10|8558|cyclin-dependent kinase 10##AK075036|CDK10|8558|cyclin-dependent kinase 10##L33264|CDK10|8558|cyclin-dependent kinase 10##AK295397|CDK10|8558|cyclin-dependent kinase 10##AB209829|CDK10|8558|cyclin-dependent kinase 10##BC017342|CDK10|8558|cyclin-dependent kinase 10##AK292351|CDK10|8558|cyclin-dependent kinase 10##BC093028|CDK10|8558|cyclin-dependent kinase 10##AK296631|CDK10|8558|cyclin-dependent kinase 10##AK290485|CDK10|8558|cyclin-dependent kinase 10##AF153430|CDK10|8558|cyclin-dependent kinase 10##AK312016|CDK10|8558|cyclin-dependent kinase 10##BC025301|CDK10|8558|cyclin-dependent kinase 10##BC032704|CDK10|8558|cyclin-dependent kinase 10##BC039608|SPATA2L|124044|spermatogenesis associated 2-like##BC053588|SPATA2L|124044|spermatogenesis associated 2-like##BC027606|SPATA2L|124044|spermatogenesis associated 2-like##NM_152339|SPATA2L|124044|spermatogenesis associated 2-like	0.0	
chr18	29869602	29869744	reg1027921.p1	5.349	+	AY695931 NM_005925 X81333 TSC_hg19_v1_chr18_+_29770001 BC136559 BC144244	-99676	+	NM_001191324 NM_198128 TSC_hg19_v1_chr18_+_29672650 AK023579 AB528421 DQ890744 DQ893914 CU676180 BT006878 CR457150	-197020	+	TSC_hg19_v1_chr18_+_29671959 AK315761 AF162680 BC018107	-197623	+	TSC_hg19_v1_chr18_-_29993196 D28353	123522	-	AL834491 BC121067 BC121068 AK025263 NM_001242409 NM_022751	180747	-	BC021267 AB037805 NM_020805	483234	-	AY695931|MEP1B|4225|meprin A, beta##NM_005925|MEP1B|4225|meprin A, beta##X81333|MEP1B|4225|meprin A, beta##BC136559|MEP1B|4225|meprin A, beta##BC144244|MEP1B|4225|meprin A, beta##NM_001191324|RNF138|51444|ring finger protein 138##NM_198128|RNF138|51444|ring finger protein 138##AK023579|RNF138|51444|ring finger protein 138##DQ890744|RNF138|51444|ring finger protein 138##DQ893914|RNF138|51444|ring finger protein 138##BT006878|RNF138|51444|ring finger protein 138##CR457150|RNF138|51444|ring finger protein 138##AK315761|RNF138|51444|ring finger protein 138##AF162680|RNF138|51444|ring finger protein 138##BC018107|RNF138|51444|ring finger protein 138##AL834491|FAM59A|64762|family with sequence similarity 59, member A##BC121067|FAM59A|64762|family with sequence similarity 59, member A##BC121068|FAM59A|64762|family with sequence similarity 59, member A##AK025263|FAM59A|64762|family with sequence similarity 59, member A##NM_001242409|FAM59A|64762|family with sequence similarity 59, member A##NM_022751|FAM59A|64762|family with sequence similarity 59, member A##BC021267|KLHL14|57565|kelch-like 14 (Drosophila)##AB037805|KLHL14|57565|kelch-like 14 (Drosophila)##NM_020805|KLHL14|57565|kelch-like 14 (Drosophila)	1.011626	CTCF.p2:-17:0.988
chr20	35134785	35134893	reg1026655.p1	5.349	+	NM_183006 BC153874 TSC_hg19_v1_chr20_+_35090197 BC108706	-44664	+	TSC_hg19_v1_chr20_+_35089870 NM_001042486 AK001681	-44970	+	NM_014902	-139396	+	TSC_hg19_v1_chr20_+_35169892 NM_006097 NM_181526	35047	+	TSC_hg19_v1_chr20_+_35169921 D82057 AK130879 AK097235 BC002648 AF176042 AF176043	35084	+	BC039668 TSC_hg19_v1_chr20_-_35201701	66852	-	NM_183006|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC153874|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC108706|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_001042486|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##AK001681|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_006097|MYL9|10398|myosin, light chain 9, regulatory##NM_181526|MYL9|10398|myosin, light chain 9, regulatory##D82057|MYL9|10398|myosin, light chain 9, regulatory##AK130879|MYL9|10398|myosin, light chain 9, regulatory##AK097235|MYL9|10398|myosin, light chain 9, regulatory##BC002648|MYL9|10398|myosin, light chain 9, regulatory##AF176042|MYL9|10398|myosin, light chain 9, regulatory##AF176043|MYL9|10398|myosin, light chain 9, regulatory	0.077887	
chr3	114246010	114246125	reg1025942.p1	5.349	+	AF139460 NM_001164342	-143579	-	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	-233214	+	NM_007136 X65233	-289643	-	BC029041 NM_001164347	96985	-	AK315307 NM_001164346 TSC_hg19_v1_chr3_-_114343793	97727	-	AK225788 NM_001164344 NM_001164345	232053	-	AF139460|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164342|ZBTB20|26137|zinc finger and BTB domain containing 20##EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20##AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20	0.988258	CTCF.p2:10:0.988
chr3	138048020	138048187	reg1023661.p1	5.349	+	TSC_hg19_v1_chr3_+_137906372 NM_014154 NM_015396 NM_213654 BC032661 AK296757 AK299769 AF161541 AK304558 AK296837 BC013424 AF109184 AK289577 BC041699	-141760	+	AF180919 TSC_hg19_v1_chr3_-_137893764 NM_016216	-154334	-	BC009472 TSC_hg19_v1_chr3_-_137893737 AK094147	-154374	-	AK094830 NM_178130	624	-	NM_001252091 NM_012219 AK124954	18410	+	TSC_hg19_v1_chr3_+_138067476 NM_001085049 NM_001252093 BC047690 AF043938	19408	+	NM_014154|ARMC8|25852|armadillo repeat containing 8##NM_015396|ARMC8|25852|armadillo repeat containing 8##NM_213654|ARMC8|25852|armadillo repeat containing 8##BC032661|ARMC8|25852|armadillo repeat containing 8##AK296757|ARMC8|25852|armadillo repeat containing 8##AK299769|ARMC8|25852|armadillo repeat containing 8##AF161541|ARMC8|25852|armadillo repeat containing 8##AK304558|ARMC8|25852|armadillo repeat containing 8##AK296837|ARMC8|25852|armadillo repeat containing 8##BC013424|ARMC8|25852|armadillo repeat containing 8##AF109184|ARMC8|25852|armadillo repeat containing 8##AK289577|ARMC8|25852|armadillo repeat containing 8##BC041699|ARMC8|25852|armadillo repeat containing 8##AF180919|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##NM_016216|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##BC009472|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##AK094147|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##AK094830|NME9|347736|NME gene family member 9##NM_178130|NME9|347736|NME gene family member 9##NM_001252091|MRAS|22808|muscle RAS oncogene homolog##NM_012219|MRAS|22808|muscle RAS oncogene homolog##AK124954|MRAS|22808|muscle RAS oncogene homolog##NM_001085049|MRAS|22808|muscle RAS oncogene homolog##NM_001252093|MRAS|22808|muscle RAS oncogene homolog##BC047690|MRAS|22808|muscle RAS oncogene homolog##AF043938|MRAS|22808|muscle RAS oncogene homolog	0.0	
chr4	10733979	10734160	reg1023826.p1	5.349	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-47668	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-275059	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-615533	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	696463	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2751882	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2751906	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr6_dbb_hap3	2177528	2177650	reg1026376.p2	5.349	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.51578	CTCF.p2:-14:0.516
chr13	62694130	62694269	reg1016948.p2	5.348	+	AK289924 NM_022843	-704545	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-704946	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-1722720	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	5110305	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	7988342	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	9746060	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.0	
chr1	40778144	40778324	reg1028410.p1	5.348	+	TSC_hg19_v1_chr1_+_40735749 AK027874	-42471	+	TSC_hg19_v1_chr1_+_40723926 EU176257 EU176564	-54297	+	TSC_hg19_v1_chr1_+_40723907 Y13834	-54326	+	M95610 AB590601 TSC_hg19_v1_chr1_-_40782905	4631	-	TSC_hg19_v1_chr1_-_40782958 BC136326 BC136327 NM_001852	4709	-	TSC_hg19_v1_chr1_-_40782992 BC041479	4786	-	AK027874|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##EU176257|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##EU176564|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##Y13834|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##M95610|COL9A2|1298|collagen, type IX, alpha 2##BC136326|COL9A2|1298|collagen, type IX, alpha 2##BC136327|COL9A2|1298|collagen, type IX, alpha 2##NM_001852|COL9A2|1298|collagen, type IX, alpha 2##BC041479|COL9A2|1298|collagen, type IX, alpha 2	0.912436	CTCF.p2:-41:0.912
chr3	38323545	38323677	reg1023851.p2	5.348	+	NM_004256 AK315301 BC035973 AB010438 CU690244 AK298375	-16265	+	TSC_hg19_v1_chr3_+_38263077 AF087893	-60528	+	TSC_hg19_v1_chr3_+_38207257 AB029024 AB384561 CU679061 DQ893255 DQ896584	-116305	+	AB011082 BC126482 BC130543 BC144079 NM_004803 BC075070 BC075071 HQ258465	23860	+	TSC_hg19_v1_chr3_+_38388285 AB015046 BC039712 NM_005108	64642	+	TSC_hg19_v1_chr3_+_38388288 BC052984	64679	+	NM_004256|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AK315301|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##BC035973|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AB010438|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AK298375|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AF087893|OXSR1|9943|oxidative-stress responsive 1##AB029024|OXSR1|9943|oxidative-stress responsive 1##DQ893255|OXSR1|9943|oxidative-stress responsive 1##DQ896584|OXSR1|9943|oxidative-stress responsive 1##AB011082|SLC22A14|9389|solute carrier family 22, member 14##BC126482|SLC22A14|9389|solute carrier family 22, member 14##BC130543|SLC22A14|9389|solute carrier family 22, member 14##BC144079|SLC22A14|9389|solute carrier family 22, member 14##NM_004803|SLC22A14|9389|solute carrier family 22, member 14##BC075070|SLC22A14|9389|solute carrier family 22, member 14##BC075071|SLC22A14|9389|solute carrier family 22, member 14##HQ258465|SLC22A14|9389|solute carrier family 22, member 14##AB015046|XYLB|9942|xylulokinase homolog (H. influenzae)##BC039712|XYLB|9942|xylulokinase homolog (H. influenzae)##NM_005108|XYLB|9942|xylulokinase homolog (H. influenzae)##BC052984|XYLB|9942|xylulokinase homolog (H. influenzae)	0.028978	
chr1	174852622	174852770	reg1029038.p1	5.347	+	NM_001035230 BC012094	-8027	+	NM_001243763 AL049701	-9137	+	AB007940 NM_001243765	-83662	+	AK316355 NM_001243764 AK316219 AK298711	81225	+	NM_001007214 AK093425 AX748118	115887	+	TSC_hg19_v1_chr1_+_174968845 NM_014412	116171	+	NM_001035230|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC012094|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243763|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL049701|RABGAP1L|9910|RAB GTPase activating protein 1-like##AB007940|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243765|RABGAP1L|9910|RAB GTPase activating protein 1-like##AK316355|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243764|RABGAP1L|9910|RAB GTPase activating protein 1-like##AK316219|RABGAP1L|9910|RAB GTPase activating protein 1-like##AK298711|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001007214|CACYBP|27101|calcyclin binding protein##AK093425|CACYBP|27101|calcyclin binding protein##NM_014412|CACYBP|27101|calcyclin binding protein	0.545544	CTCF.p2:-12:0.546
chr1	21521601	21521782	reg1002065.p1	5.347	+	TSC_hg19_v1_chr1_-_21503387 NM_001198801 NM_001198802	-18321	-	TSC_hg19_v1_chr1_-_21503344 BC072413 AB209119	-18367	-	BC030578 NM_001198803	-20452	-	D43698 TSC_hg19_v1_chr1_-_21606025 BX648351 NM_001113347	84392	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	95017	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	95243	-	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##D43698|ECE1|1889|endothelin converting enzyme 1##BX648351|ECE1|1889|endothelin converting enzyme 1##NM_001113347|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1	0.0	
chr15	63140238	63140343	reg1024564.p2	5.347	+	TSC_hg19_v1_chr15_+_63050761 BX648144 BX648146	-89516	+	AF402000 NM_015059	-200781	+	TSC_hg19_v1_chr15_+_62682748 AB621808	-457572	+	TSC_hg19_v1_chr15_+_63334949 NM_000366 NM_001018004 NM_001018005 NM_001018006 NM_001018007 NM_001018020 AK092051 AX747334 BC007433 AK057989 AK299387 AK129882 AK131384 AK309170 AL050179 M19713 DQ893259 DQ896588 CU675655 AY640414 AY640415	194612	+	M19714 TSC_hg19_v1_chr15_+_63335095	194800	+	L02923 TSC_hg19_v1_chr15_+_63335956	195668	+	BX648144|TLN2|83660|talin 2##BX648146|TLN2|83660|talin 2##AF402000|TLN2|83660|talin 2##NM_015059|TLN2|83660|talin 2##AB621808|TLN2|83660|talin 2##NM_000366|TPM1|7168|tropomyosin 1 (alpha)##NM_001018004|TPM1|7168|tropomyosin 1 (alpha)##NM_001018005|TPM1|7168|tropomyosin 1 (alpha)##NM_001018006|TPM1|7168|tropomyosin 1 (alpha)##NM_001018007|TPM1|7168|tropomyosin 1 (alpha)##NM_001018020|TPM1|7168|tropomyosin 1 (alpha)##AK092051|TPM1|7168|tropomyosin 1 (alpha)##BC007433|TPM1|7168|tropomyosin 1 (alpha)##AK057989|TPM1|7168|tropomyosin 1 (alpha)##AK299387|TPM1|7168|tropomyosin 1 (alpha)##AK129882|TPM1|7168|tropomyosin 1 (alpha)##AK131384|TPM1|7168|tropomyosin 1 (alpha)##AK309170|TPM1|7168|tropomyosin 1 (alpha)##AL050179|TPM1|7168|tropomyosin 1 (alpha)##M19713|TPM1|7168|tropomyosin 1 (alpha)##DQ893259|TPM1|7168|tropomyosin 1 (alpha)##DQ896588|TPM1|7168|tropomyosin 1 (alpha)##AY640414|TPM1|7168|tropomyosin 1 (alpha)##AY640415|TPM1|7168|tropomyosin 1 (alpha)##M19714|TPM1|7168|tropomyosin 1 (alpha)##L02923|TPM1|7168|tropomyosin 1 (alpha)	0.017018	
chr6	135732581	135732716	reg1026358.p1	5.347	+	TSC_hg19_v1_chr6_+_135517056 X17469	-215559	+	TSC_hg19_v1_chr6_+_135516916 AJ616799	-215742	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	-230062	+	AY133243 TSC_hg19_v1_chr6_-_135818858 DQ090887	86177	-	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	86237	-	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	86316	+	X17469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY133243|AHI1|54806|Abelson helper integration site 1##DQ090887|AHI1|54806|Abelson helper integration site 1##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271	0.143812	
chr3	184081209	184081328	reg1026046.p1	5.346	+	TSC_hg19_v1_chr3_+_184081196 NM_006232 Z49199 BC000739 AB464044 EU446997	-39	+	AF026004 TSC_hg19_v1_chr3_-_184079266 AK302389 BC072004 AK298952 AK302759 NM_001171087 NM_001171088 NM_001171089 NM_004366	-1940	-	BC026221 TSC_hg19_v1_chr3_+_184056421	-24906	+	BC130322 BC136338 BC143982 L33410 NM_000460 NM_001177597 NM_001177598 TSC_hg19_v1_chr3_-_184095936	14670	-	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	16772	+	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	198314	+	NM_006232|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##Z49199|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##BC000739|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##EU446997|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##AF026004|CLCN2|1181|chloride channel 2##AK302389|CLCN2|1181|chloride channel 2##BC072004|CLCN2|1181|chloride channel 2##AK298952|CLCN2|1181|chloride channel 2##AK302759|CLCN2|1181|chloride channel 2##NM_001171087|CLCN2|1181|chloride channel 2##NM_001171088|CLCN2|1181|chloride channel 2##NM_001171089|CLCN2|1181|chloride channel 2##NM_004366|CLCN2|1181|chloride channel 2##BC026221|FAM131A|131408|family with sequence similarity 131, member A##BC130322|THPO|7066|thrombopoietin##BC136338|THPO|7066|thrombopoietin##BC143982|THPO|7066|thrombopoietin##L33410|THPO|7066|thrombopoietin##NM_000460|THPO|7066|thrombopoietin##NM_001177597|THPO|7066|thrombopoietin##NM_001177598|THPO|7066|thrombopoietin##AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3	0.025622	
chr7	16471901	16472021	reg1027702.p1	5.346	+	NM_001101417 NM_001101426	-11015	-	TSC_hg19_v1_chr7_-_15726309 AK309472 X82629 NM_005924	-745670	-	AB463880 CR536553 CU677801 L36328 TSC_hg19_v1_chr7_-_15726203 BC017021 AK313386	-745832	-	AB059270 CU678977 AB590718 AK315682 BC008484 AF361494 NM_015464	33421	-	NM_001195280	94543	+	TSC_hg19_v1_chr7_-_16685370 AK023704 AL050390 AK001740 BC035353 AK001389 NM_020319	213440	-	NM_001101417|ISPD|729920|isoprenoid synthase domain containing##NM_001101426|ISPD|729920|isoprenoid synthase domain containing##AK309472|MEOX2|4223|mesenchyme homeobox 2##X82629|MEOX2|4223|mesenchyme homeobox 2##NM_005924|MEOX2|4223|mesenchyme homeobox 2##CR536553|MEOX2|4223|mesenchyme homeobox 2##L36328|MEOX2|4223|mesenchyme homeobox 2##BC017021|MEOX2|4223|mesenchyme homeobox 2##AK313386|MEOX2|4223|mesenchyme homeobox 2##AB059270|SOSTDC1|25928|sclerostin domain containing 1##AK315682|SOSTDC1|25928|sclerostin domain containing 1##BC008484|SOSTDC1|25928|sclerostin domain containing 1##AF361494|SOSTDC1|25928|sclerostin domain containing 1##NM_015464|SOSTDC1|25928|sclerostin domain containing 1##NM_001195280|LRRC72|100506049|leucine rich repeat containing 72##AK023704|ANKMY2|57037|ankyrin repeat and MYND domain containing 2##AL050390|ANKMY2|57037|ankyrin repeat and MYND domain containing 2##AK001740|ANKMY2|57037|ankyrin repeat and MYND domain containing 2##BC035353|ANKMY2|57037|ankyrin repeat and MYND domain containing 2##AK001389|ANKMY2|57037|ankyrin repeat and MYND domain containing 2##NM_020319|ANKMY2|57037|ankyrin repeat and MYND domain containing 2	1.160092	CTCF.p2:-15:0.964
chr10	103990743	103990898	reg1012568.p1	5.345	+	BC034344 NM_152310	-4678	+	NM_004741 TSC_hg19_v1_chr10_+_103912145 Z34289 AK225101 AK314363 AK056755 BC001883 BC006769 DQ891862 DQ895051 AY820769 D21262	-78769	+	AF325193 NM_015062 TSC_hg19_v1_chr10_+_103892796 AK299885 BC063806 AB011167 BC063829 AK095248 AB384505	-98015	+	BC011642 NM_005029	10409	-	NM_001199378 NM_001199379 NM_004193 BC057804 BC068543 TSC_hg19_v1_chr10_+_104005288 BC094763 AK025330 BC032543	14459	+	TSC_hg19_v1_chr10_+_104005308 AF068755 D87435 BC117681 BC117682	14547	+	BC034344|ELOVL3|83401|ELOVL fatty acid elongase 3##NM_152310|ELOVL3|83401|ELOVL fatty acid elongase 3##NM_004741|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##Z34289|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK225101|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK314363|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK056755|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC001883|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC006769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##DQ891862|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##DQ895051|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AY820769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##D21262|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AF325193|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##NM_015062|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AK299885|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC063806|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AB011167|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC063829|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AK095248|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC011642|PITX3|5309|paired-like homeodomain 3##NM_005029|PITX3|5309|paired-like homeodomain 3##NM_001199378|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199379|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	0.0	
chr10	73550640	73550742	reg1025409.p2	5.345	+	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	-17385	-	AK074172 NM_001168390	-53111	-	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	-71099	-	AY563165 AY563166 NM_001171933 NM_001171934	4836	+	AY563161 AY563162 NM_001171935 NM_001171936	20948	+	TSC_hg19_v1_chr10_-_73611004 BT006849 CR456746 CU678650 DQ893009 DQ896255 M60255 M60257 M60258 AB527305 BC001503 J03015 M32221 D00422 M81355 AB209776 BC004275 BC007612	60290	-	BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AY563165|CDH23|64072|cadherin-related 23##AY563166|CDH23|64072|cadherin-related 23##NM_001171933|CDH23|64072|cadherin-related 23##NM_001171934|CDH23|64072|cadherin-related 23##AY563161|CDH23|64072|cadherin-related 23##AY563162|CDH23|64072|cadherin-related 23##NM_001171935|CDH23|64072|cadherin-related 23##NM_001171936|CDH23|64072|cadherin-related 23##BT006849|PSAP|5660|prosaposin##CR456746|PSAP|5660|prosaposin##DQ893009|PSAP|5660|prosaposin##DQ896255|PSAP|5660|prosaposin##M60255|PSAP|5660|prosaposin##M60257|PSAP|5660|prosaposin##M60258|PSAP|5660|prosaposin##BC001503|PSAP|5660|prosaposin##J03015|PSAP|5660|prosaposin##M32221|PSAP|5660|prosaposin##D00422|PSAP|5660|prosaposin##M81355|PSAP|5660|prosaposin##AB209776|PSAP|5660|prosaposin##BC004275|PSAP|5660|prosaposin##BC007612|PSAP|5660|prosaposin	0.767591	CTCF.p2:-31:0.733
chr21	39544338	39544447	reg1028081.p2	5.345	+	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	-50991	-	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	-255681	-	NM_130438 NM_001396 U52373 D85759 U58496	-751772	+	BC013327 NM_002243	84271	+	D87291 NM_170736 AK292812	84537	+	NM_170737	100036	+	HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170737|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.905516	CTCF.p2:-27:0.906
chr1	154836219	154836364	reg1026429.p1	5.344	+	CU692066 HQ448417 AF438203 BC042147 NM_170782	-4029	-	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-235826	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-235877	-	BX649146 TSC_hg19_v1_chr1_-_154840541	4210	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	6455	-	BT019976 CR541998 TSC_hg19_v1_chr1_-_154909187 L77213	72883	-	HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BT019976|PMVK|10654|phosphomevalonate kinase##CR541998|PMVK|10654|phosphomevalonate kinase##L77213|PMVK|10654|phosphomevalonate kinase	0.0	
chr5	157243828	157243982	reg1028613.p1	5.344	+	AK055297 TSC_hg19_v1_chr5_+_157184422	-59525	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-73165	+	AY463216 NM_017872 TSC_hg19_v1_chr5_+_157158427 AK000553 AK223119 AK304590 BC023521 AL136669 AK021663 AB528251 AM392629 CR533503 BC001523 BC001852 CU674750	-85477	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	42185	-	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	1282552	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	1282837	-	BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AY463216|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##NM_017872|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK000553|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK223119|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK304590|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC023521|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AL136669|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK021663|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##CR533503|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001523|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001852|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1	0.964071	CTCF.p2:-13:0.964
chr5	54790163	54790280	reg1026612.p1	5.344	+	AK291649 AK304788 TSC_hg19_v1_chr5_+_54603828 D29641 BC065258 AB527662	-186387	+	TSC_hg19_v1_chr5_+_54603816 BC104996 BC113509 BC028604	-186415	+	NM_015360 BC105291 BX640789	-186626	+	BC040295 CU691780 AB000888 BC117133 BC143281 BC168254 TSC_hg19_v1_chr5_-_54830793 AF017116 BC039847 AF014402 AF014403 BC008787 NM_003711 NM_176895	40447	-	TSC_hg19_v1_chr5_-_55008090 BC101361 BC101362 AK075190	217865	-	TSC_hg19_v1_chr5_-_55008148 AK122957 BC066891 NM_173514	217927	-	AK291649|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##AK304788|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##D29641|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC065258|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC104996|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC113509|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC028604|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##NM_015360|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC105291|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BX640789|SKIV2L2|23517|superkiller viralicidic activity 2-like 2 (S. cerevisiae)##BC040295|RNF138P1|379013|ring finger protein 138 pseudogene 1##AB000888|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC117133|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC143281|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC168254|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF017116|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC039847|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF014402|PPAP2A|8611|phosphatidic acid phosphatase type 2A##AF014403|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC008787|PPAP2A|8611|phosphatidic acid phosphatase type 2A##NM_003711|PPAP2A|8611|phosphatidic acid phosphatase type 2A##NM_176895|PPAP2A|8611|phosphatidic acid phosphatase type 2A##BC101361|SLC38A9|153129|solute carrier family 38, member 9##BC101362|SLC38A9|153129|solute carrier family 38, member 9##AK075190|SLC38A9|153129|solute carrier family 38, member 9##AK122957|SLC38A9|153129|solute carrier family 38, member 9##BC066891|SLC38A9|153129|solute carrier family 38, member 9##NM_173514|SLC38A9|153129|solute carrier family 38, member 9	0.536366	CTCF.p2:-25:0.536
chr11	95241089	95241201	reg1025549.p1	5.343	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	-276841	-	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-418133	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-440737	+	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	281506	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	281588	-	AK021591 TSC_hg19_v1_chr11_-_95522975 BC026013 NM_144664	281821	-	BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B##AK021591|FAM76B|143684|family with sequence similarity 76, member B##BC026013|FAM76B|143684|family with sequence similarity 76, member B##NM_144664|FAM76B|143684|family with sequence similarity 76, member B	0.993901	CTCF.p2:4:0.994
chr13	71535132	71535221	reg1025168.p1	5.343	+	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	-852635	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-3730672	-	AK289924 NM_022843	-9545522	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	905083	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	905587	-	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	906258	-	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)	0.019733	
chr13	96632866	96632968	reg1026063.p2	5.343	+	TSC_hg19_v1_chr13_+_96329409 BC047936 BC020215 BC033823 AB384852 CU690538	-303459	+	TSC_hg19_v1_chr13_+_96329401 AK312861	-303516	+	AK292947 NM_006260 TSC_hg19_v1_chr13_+_96329392	-303523	+	CU688350 TSC_hg19_v1_chr13_-_96705666 BC125233 BC125234 AF227906 BC017759 BC067807 BC111021 AK001735 BC032302 NM_020121	72733	-	AF539426 NM_153456	110175	+	AK122639 NM_080818 AK313684	1013695	-	BC047936|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##BC033823|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##AK312861|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##AK292947|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##NM_006260|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##BC125233|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC125234|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF227906|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC017759|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC067807|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC111021|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AK001735|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC032302|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##NM_020121|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##AK122639|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##NM_080818|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AK313684|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1	0.995258	CTCF.p2:12:0.995
chr15	101168277	101168348	reg1006036.p2	5.343	+	NM_024708 NM_198243 TSC_hg19_v1_chr15_+_101142810 AK289860 BC063581 AF451994 AK026204 AK222958 AK222974 BC025252	-25517	+	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	-25903	-	BC034500 BC034970 NM_178842	-83415	-	TSC_hg19_v1_chr15_+_101390032 AK056534	221721	+	TSC_hg19_v1_chr15_+_101420006 NM_000693	251694	+	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	251759	+	NM_024708|ASB7|140460|ankyrin repeat and SOCS box containing 7##NM_198243|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK289860|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC063581|ASB7|140460|ankyrin repeat and SOCS box containing 7##AF451994|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK026204|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222958|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222974|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC025252|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK056534|LOC145757|145757|uncharacterized LOC145757##NM_000693|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3	0.0	
chr16	58712820	58712912	reg1023279.p1	5.343	+	TSC_hg19_v1_chr16_-_58663742 BC040523 AL833549 NM_016284 NM_206999	-49121	-	AK300281 AK056927 BX537840 TSC_hg19_v1_chr16_-_58663736 EF553522 AL832769	-49130	-	TSC_hg19_v1_chr16_-_58663731 BX647815	-49137	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	5790	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	55331	-	AK124734 NM_001796	3357872	-	BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK300281|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK056927|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##BX537840|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##EF553522|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL832769|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##BX647815|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2	0.903035	CTCF.p2:-19:0.903
chr18	70368676	70368800	reg1026276.p2	5.343	+	NM_182511 TSC_hg19_v1_chr18_-_70211738	-157008	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	-157963	-	TSC_hg19_v1_chr18_+_67956280 BC020082	-2412477	+	AF448839 NM_138999	164195	-	AF448838 BC050329 NM_001201465 NM_138966	166071	-	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	1446289	-	NM_182511|CBLN2|147381|cerebellin 2 precursor##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##BC020082|SOCS6|9306|suppressor of cytokine signaling 6##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15	0.912249	CTCF.p2:4:0.912
chr2	86623690	86623801	reg1027551.p2	5.343	+	AK297287 NM_001164730	-58540	-	AY562239 CR457301 CU687956 AK297201 TSC_hg19_v1_chr2_-_86564750 BC064846 AK294300 AK297359 AK297373 AK299334 AK023172 NM_001164731 NM_001164732 NM_022912	-59012	-	NM_016622 NM_145644 TSC_hg19_v1_chr2_+_86426604 BC020651 AK074352 AK314555 AK314577 AF208849 AL832982 CU676602	-197161	+	NM_018433	44525	+	TSC_hg19_v1_chr2_+_86668482 BX647752 BX640698	44710	+	TSC_hg19_v1_chr2_+_86668501 BC038297 BX647271 BX649109 CR749581 AB018285 BX648841 NM_001146688	44790	+	AK297287|REEP1|65055|receptor accessory protein 1##NM_001164730|REEP1|65055|receptor accessory protein 1##AY562239|REEP1|65055|receptor accessory protein 1##CR457301|REEP1|65055|receptor accessory protein 1##AK297201|REEP1|65055|receptor accessory protein 1##BC064846|REEP1|65055|receptor accessory protein 1##AK294300|REEP1|65055|receptor accessory protein 1##AK297359|REEP1|65055|receptor accessory protein 1##AK297373|REEP1|65055|receptor accessory protein 1##AK299334|REEP1|65055|receptor accessory protein 1##AK023172|REEP1|65055|receptor accessory protein 1##NM_001164731|REEP1|65055|receptor accessory protein 1##NM_001164732|REEP1|65055|receptor accessory protein 1##NM_022912|REEP1|65055|receptor accessory protein 1##NM_016622|MRPL35|51318|mitochondrial ribosomal protein L35##NM_145644|MRPL35|51318|mitochondrial ribosomal protein L35##BC020651|MRPL35|51318|mitochondrial ribosomal protein L35##AK074352|MRPL35|51318|mitochondrial ribosomal protein L35##AK314555|MRPL35|51318|mitochondrial ribosomal protein L35##AK314577|MRPL35|51318|mitochondrial ribosomal protein L35##AF208849|MRPL35|51318|mitochondrial ribosomal protein L35##AL832982|MRPL35|51318|mitochondrial ribosomal protein L35##NM_018433|KDM3A|55818|lysine (K)-specific demethylase 3A##BX647752|KDM3A|55818|lysine (K)-specific demethylase 3A##BX640698|KDM3A|55818|lysine (K)-specific demethylase 3A##BC038297|KDM3A|55818|lysine (K)-specific demethylase 3A##BX647271|KDM3A|55818|lysine (K)-specific demethylase 3A##BX649109|KDM3A|55818|lysine (K)-specific demethylase 3A##CR749581|KDM3A|55818|lysine (K)-specific demethylase 3A##AB018285|KDM3A|55818|lysine (K)-specific demethylase 3A##BX648841|KDM3A|55818|lysine (K)-specific demethylase 3A##NM_001146688|KDM3A|55818|lysine (K)-specific demethylase 3A	0.156007	
chr5	100163785	100163957	reg1026029.p2	5.343	+	AF529367 TSC_hg19_v1_chr5_+_99871306	-292601	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-292798	+	BC054860 BC117134 NM_001270 AF006513	-1901643	-	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	75057	-	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	1468237	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	1670762	-	AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1	0.0	
chr1	171685156	171685284	reg1023773.p2	5.342	+	AB528547 DQ892415 DQ895629 AF001620 FJ227302 FJ237046 FJ237047 NM_000261 U85257 D88214 BC029261 AK300924 AK300943 AK301297 AK315443 AK097310	-63420	-	AF253978 AL096857 TSC_hg19_v1_chr1_+_171481269 AF488829	-203968	+	TSC_hg19_v1_chr1_+_171454689 BC066968 NM_015172 BC058930 BC026108 BC045713 BC001260 BC006090	-230526	+	BC005974 TSC_hg19_v1_chr1_-_171711206 AL035296 AK290441 AF044310 BC031264 BC007019 NM_001185127 NM_003762	26015	-	AK092254 TSC_hg19_v1_chr1_+_171711293	26067	+	NM_001007239 NM_014955 NM_015935 TSC_hg19_v1_chr1_+_171750799 AK304471 AK223493	65560	+	DQ892415|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##DQ895629|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AF001620|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ227302|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ237046|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ237047|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##NM_000261|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##U85257|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##D88214|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##BC029261|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK300924|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK300943|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK301297|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK315443|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK097310|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AF253978|PRRC2C|23215|proline-rich coiled-coil 2C##AL096857|PRRC2C|23215|proline-rich coiled-coil 2C##AF488829|PRRC2C|23215|proline-rich coiled-coil 2C##BC066968|PRRC2C|23215|proline-rich coiled-coil 2C##NM_015172|PRRC2C|23215|proline-rich coiled-coil 2C##BC058930|PRRC2C|23215|proline-rich coiled-coil 2C##BC026108|PRRC2C|23215|proline-rich coiled-coil 2C##BC045713|PRRC2C|23215|proline-rich coiled-coil 2C##BC001260|PRRC2C|23215|proline-rich coiled-coil 2C##BC006090|PRRC2C|23215|proline-rich coiled-coil 2C##BC005974|VAMP4|8674|vesicle-associated membrane protein 4##AL035296|VAMP4|8674|vesicle-associated membrane protein 4##AK290441|VAMP4|8674|vesicle-associated membrane protein 4##AF044310|VAMP4|8674|vesicle-associated membrane protein 4##BC031264|VAMP4|8674|vesicle-associated membrane protein 4##BC007019|VAMP4|8674|vesicle-associated membrane protein 4##NM_001185127|VAMP4|8674|vesicle-associated membrane protein 4##NM_003762|VAMP4|8674|vesicle-associated membrane protein 4##NM_001007239|METTL13|51603|methyltransferase like 13##NM_014955|METTL13|51603|methyltransferase like 13##NM_015935|METTL13|51603|methyltransferase like 13##AK304471|METTL13|51603|methyltransferase like 13##AK223493|METTL13|51603|methyltransferase like 13	0.18921	
chr14	91800045	91800206	reg1025271.p1	5.342	+	BC098567 NM_003485	-79931	-	BC128536 NM_001177676	-89274	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-219098	+	TSC_hg19_v1_chr14_-_91884159 AF070587	84023	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	84050	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	176375	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.0	
chr16	68754019	68754200	reg1023193.p1	5.342	+	X63629 TSC_hg19_v1_chr16_+_68679239 AB527800 EU832319 EU832404	-74855	+	TSC_hg19_v1_chr16_+_68679201 AK296968 AK312554 AK225396	-74904	+	NM_001793	-75959	+	AK312551 TSC_hg19_v1_chr16_+_68771194 AK297913 EU709494 NM_004360 BC141838 BC146662 L08599	17092	+	BC144283 TSC_hg19_v1_chr16_+_68771216 AK290012 Z13009	17110	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	17136	+	X63629|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##EU832319|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##EU832404|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK296968|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK312554|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK225396|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##NM_001793|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK312551|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK297913|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##EU709494|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##NM_004360|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC141838|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC146662|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##L08599|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC144283|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK290012|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##Z13009|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)	0.0	
chr22	38572343	38572488	reg1025314.p1	5.342	+	TSC_hg19_v1_chr22_-_38506676 AY358164 NM_025045	-65738	-	CU677367 TSC_hg19_v1_chr22_-_38506639 AK026235 BC015619	-65813	-	AF132610 NM_013356	-93257	-	CR456543 TSC_hg19_v1_chr22_-_38577838 AK291212 BC036742 AL080187 NM_001004426 NM_003560 AF064594 AK308308 BC051904 AK096521 AK290825 NM_001199562 AK300459	5378	-	NM_001161572 NM_001161574 NM_012323 TSC_hg19_v1_chr22_+_38597996 AK002001 BC067751 AK300932 AJ010857	25562	+	BC015037 TSC_hg19_v1_chr22_+_38598094 AB025247	25671	+	AY358164|BAIAP2L2|80115|BAI1-associated protein 2-like 2##NM_025045|BAIAP2L2|80115|BAI1-associated protein 2-like 2##AK026235|BAIAP2L2|80115|BAI1-associated protein 2-like 2##BC015619|BAIAP2L2|80115|BAI1-associated protein 2-like 2##AF132610|SLC16A8|23539|solute carrier family 16, member 8 (monocarboxylic acid transporter 3)##NM_013356|SLC16A8|23539|solute carrier family 16, member 8 (monocarboxylic acid transporter 3)##CR456543|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK291212|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##BC036742|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AL080187|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001004426|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_003560|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AF064594|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK308308|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##BC051904|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK096521|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK290825|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001199562|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK300459|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	0.0	
chr2	25537411	25537592	reg1026131.p2	5.342	+	TSC_hg19_v1_chr2_-_25536762 AB527956 EU446951	-694	-	TSC_hg19_v1_chr2_-_25475127 AF480163 NM_153759	-62295	-	TSC_hg19_v1_chr2_-_25468920 AK025230	-68523	-	AF067972 TSC_hg19_v1_chr2_-_25564801 BC043617 NM_022552	27298	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	27827	-	TSC_hg19_v1_chr2_-_25565353 AB208833	27862	-	EU446951|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF480163|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_153759|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF067972|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC043617|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_022552|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.031894	
chr5	139726389	139726494	reg1026701.p2	5.342	+	M60278 BC033097 TSC_hg19_v1_chr5_-_139726189 AK222688 AK307310 AK313202 NM_001945	-258	-	TSC_hg19_v1_chr5_-_139725861 EU832647 EU832724	-553	-	TSC_hg19_v1_chr5_-_139682680 BC011869 BC003620 BC006202 AK223394 NM_002622	-43757	-	AF332961 NM_031467 AF336237 BC136262 BC143602 AF313465 AB032762	13365	+	TSC_hg19_v1_chr5_-_139780719 BC079833	54276	-	TSC_hg19_v1_chr5_-_139781027 BC030152	54600	-	M60278|HBEGF|1839|heparin-binding EGF-like growth factor##BC033097|HBEGF|1839|heparin-binding EGF-like growth factor##AK222688|HBEGF|1839|heparin-binding EGF-like growth factor##AK307310|HBEGF|1839|heparin-binding EGF-like growth factor##AK313202|HBEGF|1839|heparin-binding EGF-like growth factor##NM_001945|HBEGF|1839|heparin-binding EGF-like growth factor##EU832647|HBEGF|1839|heparin-binding EGF-like growth factor##EU832724|HBEGF|1839|heparin-binding EGF-like growth factor##BC011869|PFDN1|5201|prefoldin subunit 1##BC003620|PFDN1|5201|prefoldin subunit 1##BC006202|PFDN1|5201|prefoldin subunit 1##AK223394|PFDN1|5201|prefoldin subunit 1##NM_002622|PFDN1|5201|prefoldin subunit 1##AF332961|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##NM_031467|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AF336237|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##BC136262|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##BC143602|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AF313465|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9##AB032762|SLC4A9|83697|solute carrier family 4, sodium bicarbonate cotransporter, member 9	0.981945	CTCF.p2:-8:0.982
chr12	121175903	121176002	reg1026129.p1	5.341	+	NM_000017 TSC_hg19_v1_chr12_+_121163641 BC025963 AK300645 M26393 DQ892184 DQ895378 CU693082 AB527081	-12323	+	TSC_hg19_v1_chr12_+_121148260 AK126367 BC070088	-27679	+	NM_001080533	-28122	+	AK074916 TSC_hg19_v1_chr12_-_121248688	72731	-	AY169313 TSC_hg19_v1_chr12_-_121341927 BC073910 AK291161	166012	-	TSC_hg19_v1_chr12_-_121342070 AK223590 NM_139015	166182	-	NM_000017|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##BC025963|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AK300645|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##M26393|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##DQ892184|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##DQ895378|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AB527081|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AK126367|UNC119B|84747|unc-119 homolog B (C. elegans)##BC070088|UNC119B|84747|unc-119 homolog B (C. elegans)##NM_001080533|UNC119B|84747|unc-119 homolog B (C. elegans)##AK074916|SPPL3|121665|signal peptide peptidase-like 3##AY169313|SPPL3|121665|signal peptide peptidase-like 3##BC073910|SPPL3|121665|signal peptide peptidase-like 3##AK291161|SPPL3|121665|signal peptide peptidase-like 3##AK223590|SPPL3|121665|signal peptide peptidase-like 3##NM_139015|SPPL3|121665|signal peptide peptidase-like 3	0.224109	CTCF.p2:8:0.224
chr15	67596038	67596219	reg1001553.p1	5.341	+	TSC_hg19_v1_chr15_+_67547171 BC039463 NM_001031715 NM_022784 AY014282 AK292478 AK304303 BC031041 BC048964 BC039292 AK022538 CU690588	-48954	+	AB528136 AM393020 AM393411 CR533540 CU691322 TSC_hg19_v1_chr15_-_67547000 AK021568 AL136715 BC058886 BC047026 BC035852 NM_024666	-49108	-	NM_001145104 AK300614 AK301348	-137632	+	TSC_hg19_v1_chr15_+_67813533 NM_001143936 AK294012 AY726587	217419	+	TSC_hg19_v1_chr15_-_67814131 BC047537	218028	-	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	238894	+	BC039463|IQCH|64799|IQ motif containing H##NM_001031715|IQCH|64799|IQ motif containing H##NM_022784|IQCH|64799|IQ motif containing H##AY014282|IQCH|64799|IQ motif containing H##AK292478|IQCH|64799|IQ motif containing H##AK304303|IQCH|64799|IQ motif containing H##BC031041|IQCH|64799|IQ motif containing H##BC048964|IQCH|64799|IQ motif containing H##BC039292|IQCH|64799|IQ motif containing H##AK022538|IQCH|64799|IQ motif containing H##AM393020|AAGAB|79719|alpha- and gamma-adaptin binding protein##AM393411|AAGAB|79719|alpha- and gamma-adaptin binding protein##CR533540|AAGAB|79719|alpha- and gamma-adaptin binding protein##AK021568|AAGAB|79719|alpha- and gamma-adaptin binding protein##AL136715|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC058886|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC047026|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC035852|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_024666|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3##NM_001143936|C15orf61|145853|chromosome 15 open reading frame 61##AK294012|C15orf61|145853|chromosome 15 open reading frame 61##AY726587|C15orf61|145853|chromosome 15 open reading frame 61##BC047537|LOC100506686|100506686|uncharacterized LOC100506686##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5	0.0	
chr17	73319510	73319691	reg1000842.p2	5.341	+	TSC_hg19_v1_chr17_-_73285501 AK075239 NM_001126121 NM_001126122 NM_021734	-34071	-	BC001075 BC005120 TSC_hg19_v1_chr17_-_73285471 AL833387	-34128	-	TSC_hg19_v1_chr17_-_73267265 AF225422 NM_001242498 NM_020679	-52286	-	AB385058 AF498925 CR450363 CR541942 DQ891830 DQ894923 CU674310 L29511 TSC_hg19_v1_chr17_-_73389844	70177	-	AK091010 TSC_hg19_v1_chr17_-_73401721	82044	-	TSC_hg19_v1_chr17_-_73401738 BC000631	82134	-	AK075239|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126121|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126122|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_021734|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC001075|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC005120|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AL833387|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AF225422|MIF4GD|57409|MIF4G domain containing##NM_001242498|MIF4GD|57409|MIF4G domain containing##NM_020679|MIF4GD|57409|MIF4G domain containing##AF498925|GRB2|2885|growth factor receptor-bound protein 2##CR450363|GRB2|2885|growth factor receptor-bound protein 2##CR541942|GRB2|2885|growth factor receptor-bound protein 2##DQ891830|GRB2|2885|growth factor receptor-bound protein 2##DQ894923|GRB2|2885|growth factor receptor-bound protein 2##L29511|GRB2|2885|growth factor receptor-bound protein 2##AK091010|GRB2|2885|growth factor receptor-bound protein 2##BC000631|GRB2|2885|growth factor receptor-bound protein 2	0.0	
chr10	66493915	66494013	reg1026156.p2	5.340	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-1212723	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-1212802	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-1212849	+	NM_178011 BX640611 AY358315 BC111492	2191851	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	2931432	-	AF091606 AK313882 NM_013266	2961973	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.914384	CTCF.p2:-9:0.914
chr19	7767057	7767238	reg1027136.p2	5.340	+	BC064417 BC062591 AK223207 BC014108 M14766 TSC_hg19_v1_chr19_-_7767004 AK310707 AK310071 M15059 NM_001220500 NM_002002 X04772	-143	-	TSC_hg19_v1_chr19_-_7764328 NM_001207019	-2821	-	TSC_hg19_v1_chr19_+_7745742 BC042161 NM_174894 NM_001042461 BC022836	-21392	+	AY203939 BC093691 BC093693 BC143309 AY423706 NM_001244856 NM_198492	29869	-	AY042221 AY042222 AY042223 AY042224 AY042225 AY042226 AY042227 AY042228 AY042229 AY042230 AY042231 AY042232 AY042233 AB527563 BC110615 AF290886 AK293089 TSC_hg19_v1_chr19_-_7812421 M98457 AK304190 AK313585 NM_001144893 NM_001144894 NM_001144895 NM_001144896 NM_001144897 NM_001144899 NM_021155	45282	-	NM_001144904 NM_001144905 NM_001144906 NM_001144907 NM_001144908 NM_001144909 NM_001144910 NM_001144911 NM_014257 AK292278 BC038851 AF290887 AK304499 AK314704 AB015629 AF245219 AK298084 AK023750 BC110614 AY343913 DQ893779 AY042234 AY042235 AY042236 AY042237 AY042238 AY042239 AY042240	60946	+	BC064417|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC062591|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK223207|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC014108|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M14766|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310707|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310071|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M15059|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_001220500|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_002002|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##X04772|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_001207019|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC042161|TRAPPC5|126003|trafficking protein particle complex 5##NM_174894|TRAPPC5|126003|trafficking protein particle complex 5##NM_001042461|TRAPPC5|126003|trafficking protein particle complex 5##BC022836|TRAPPC5|126003|trafficking protein particle complex 5##AY203939|CLEC4G|339390|C-type lectin domain family 4, member G##BC093691|CLEC4G|339390|C-type lectin domain family 4, member G##BC093693|CLEC4G|339390|C-type lectin domain family 4, member G##BC143309|CLEC4G|339390|C-type lectin domain family 4, member G##AY423706|CLEC4G|339390|C-type lectin domain family 4, member G##NM_001244856|CLEC4G|339390|C-type lectin domain family 4, member G##NM_198492|CLEC4G|339390|C-type lectin domain family 4, member G##AY042221|CD209|30835|CD209 molecule##AY042222|CD209|30835|CD209 molecule##AY042223|CD209|30835|CD209 molecule##AY042224|CD209|30835|CD209 molecule##AY042225|CD209|30835|CD209 molecule##AY042226|CD209|30835|CD209 molecule##AY042227|CD209|30835|CD209 molecule##AY042228|CD209|30835|CD209 molecule##AY042229|CD209|30835|CD209 molecule##AY042230|CD209|30835|CD209 molecule##AY042231|CD209|30835|CD209 molecule##AY042232|CD209|30835|CD209 molecule##AY042233|CD209|30835|CD209 molecule##BC110615|CD209|30835|CD209 molecule##AF290886|CD209|30835|CD209 molecule##AK293089|CD209|30835|CD209 molecule##M98457|CD209|30835|CD209 molecule##AK304190|CD209|30835|CD209 molecule##AK313585|CD209|30835|CD209 molecule##NM_001144893|CD209|30835|CD209 molecule##NM_001144894|CD209|30835|CD209 molecule##NM_001144895|CD209|30835|CD209 molecule##NM_001144896|CD209|30835|CD209 molecule##NM_001144897|CD209|30835|CD209 molecule##NM_001144899|CD209|30835|CD209 molecule##NM_021155|CD209|30835|CD209 molecule##NM_001144904|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144905|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144906|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144907|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144908|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144909|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144910|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144911|CLEC4M|10332|C-type lectin domain family 4, member M##NM_014257|CLEC4M|10332|C-type lectin domain family 4, member M##AK292278|CLEC4M|10332|C-type lectin domain family 4, member M##BC038851|CLEC4M|10332|C-type lectin domain family 4, member M##AF290887|CLEC4M|10332|C-type lectin domain family 4, member M##AK304499|CLEC4M|10332|C-type lectin domain family 4, member M##AK314704|CLEC4M|10332|C-type lectin domain family 4, member M##AB015629|CLEC4M|10332|C-type lectin domain family 4, member M##AF245219|CLEC4M|10332|C-type lectin domain family 4, member M##AK298084|CLEC4M|10332|C-type lectin domain family 4, member M##AK023750|CLEC4M|10332|C-type lectin domain family 4, member M##BC110614|CLEC4M|10332|C-type lectin domain family 4, member M##AY343913|CLEC4M|10332|C-type lectin domain family 4, member M##DQ893779|CLEC4M|10332|C-type lectin domain family 4, member M##AY042234|CLEC4M|10332|C-type lectin domain family 4, member M##AY042235|CLEC4M|10332|C-type lectin domain family 4, member M##AY042236|CLEC4M|10332|C-type lectin domain family 4, member M##AY042237|CLEC4M|10332|C-type lectin domain family 4, member M##AY042238|CLEC4M|10332|C-type lectin domain family 4, member M##AY042239|CLEC4M|10332|C-type lectin domain family 4, member M##AY042240|CLEC4M|10332|C-type lectin domain family 4, member M	0.0	
chr11	82393372	82393486	reg1029631.p1	5.339	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-3241705	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-4107534	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-4107637	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	51469	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	218088	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	219345	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.99931	CTCF.p2:2:0.999
chr12	3992475	3992656	reg1028508.p1	5.339	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-10065	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-130183	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-130297	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	390479	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	437826	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	496235	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.0	
chr16	545558	545695	reg1025644.p3	5.339	+	TSC_hg19_v1_chr16_+_524843 AK303061 NM_001142272	-20777	+	TSC_hg19_v1_chr16_+_475648 BC051360 NM_014700	-69974	+	TSC_hg19_v1_chr16_+_475616 AB014565 AF395731	-70011	+	TSC_hg19_v1_chr16_+_570732 Z36827 AF038180	25131	+	TSC_hg19_v1_chr16_+_577845 BC112918 NM_005632 U85647 BC032648	32266	+	TSC_hg19_v1_chr16_+_610415 BC016613 NM_145270	64788	+	AK303061|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##NM_001142272|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##BC051360|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##NM_014700|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##AB014565|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##AF395731|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##BC112918|SOLH|6650|small optic lobes homolog (Drosophila)##NM_005632|SOLH|6650|small optic lobes homolog (Drosophila)##U85647|SOLH|6650|small optic lobes homolog (Drosophila)##BC032648|SOLH|6650|small optic lobes homolog (Drosophila)##BC016613|C16orf11|146325|chromosome 16 open reading frame 11##NM_145270|C16orf11|146325|chromosome 16 open reading frame 11	0.81468	CTCF.p2:-15:0.803
chr17	47929246	47929357	reg1023569.p2	5.339	+	AF515828 AF515829 AF515830 AF515831 AF521560 AY471574 BC100840 BC100841 BC100842 BC100843 BC111857 BC111858 NM_001077503 NM_001077504 NM_001077505 NM_001077506 NM_170685	-3923	-	AK127421 NM_001242791	-6030	+	TSC_hg19_v1_chr17_+_47866119 AF074606 AB463912 CU689460 DQ890883 DQ894037	-63143	+	BC016145 NM_138281 AF254115	117261	+	U31762 TSC_hg19_v1_chr17_+_48049688	120382	+	NM_001934 U73328	120828	+	AF515828|TAC4|255061|tachykinin 4 (hemokinin)##AF515829|TAC4|255061|tachykinin 4 (hemokinin)##AF515830|TAC4|255061|tachykinin 4 (hemokinin)##AF515831|TAC4|255061|tachykinin 4 (hemokinin)##AF521560|TAC4|255061|tachykinin 4 (hemokinin)##AY471574|TAC4|255061|tachykinin 4 (hemokinin)##BC100840|TAC4|255061|tachykinin 4 (hemokinin)##BC100841|TAC4|255061|tachykinin 4 (hemokinin)##BC100842|TAC4|255061|tachykinin 4 (hemokinin)##BC100843|TAC4|255061|tachykinin 4 (hemokinin)##BC111857|TAC4|255061|tachykinin 4 (hemokinin)##BC111858|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077503|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077504|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077505|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077506|TAC4|255061|tachykinin 4 (hemokinin)##NM_170685|TAC4|255061|tachykinin 4 (hemokinin)##AK127421|FLJ45513|729220|uncharacterized LOC729220##NM_001242791|FLJ45513|729220|uncharacterized LOC729220##AF074606|KAT7|11143|K(lysine) acetyltransferase 7##DQ890883|KAT7|11143|K(lysine) acetyltransferase 7##DQ894037|KAT7|11143|K(lysine) acetyltransferase 7##BC016145|DLX4|1748|distal-less homeobox 4##NM_138281|DLX4|1748|distal-less homeobox 4##AF254115|DLX4|1748|distal-less homeobox 4##U31762|DLX4|1748|distal-less homeobox 4##NM_001934|DLX4|1748|distal-less homeobox 4##U73328|DLX4|1748|distal-less homeobox 4	0.672818	CTCF.p2:4:0.673
chr4	13656218	13656399	reg1006766.p2	5.339	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-26991	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-106894	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-110233	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	1347401	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	1347687	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	1347989	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.028101	
chr5	112379352	112379476	reg1027645.p1	5.339	+	TSC_hg19_v1_chr5_+_112312506 AY135173 AY146650 BC017965 AK296361 AK090564 AX746512 BC064593 BC068042 CU687920	-66886	+	TSC_hg19_v1_chr5_+_112312407 NM_001242377 NM_152624	-67009	+	CU688102 AY562243 BC065926 TSC_hg19_v1_chr5_-_112257925 BC000232 M74090 AK295436 AK298268 AK299902 AK300048 AK312522 M73547 AX775929 BX648005 NM_005669	-121427	-	M62397 AK096212 TSC_hg19_v1_chr5_-_112630346	250911	-	TSC_hg19_v1_chr5_-_112630624 BC009279 BC018919 NM_002387 AK300259	251195	-	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	391218	-	AY135173|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY146650|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC017965|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK296361|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK090564|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC064593|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC068042|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##NM_001242377|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##NM_152624|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY562243|REEP5|7905|receptor accessory protein 5##BC065926|REEP5|7905|receptor accessory protein 5##BC000232|REEP5|7905|receptor accessory protein 5##M74090|REEP5|7905|receptor accessory protein 5##AK295436|REEP5|7905|receptor accessory protein 5##AK298268|REEP5|7905|receptor accessory protein 5##AK299902|REEP5|7905|receptor accessory protein 5##AK312522|REEP5|7905|receptor accessory protein 5##BX648005|REEP5|7905|receptor accessory protein 5##NM_005669|REEP5|7905|receptor accessory protein 5##M62397|MCC|4163|mutated in colorectal cancers##AK096212|MCC|4163|mutated in colorectal cancers##BC009279|MCC|4163|mutated in colorectal cancers##BC018919|MCC|4163|mutated in colorectal cancers##NM_002387|MCC|4163|mutated in colorectal cancers##AK300259|MCC|4163|mutated in colorectal cancers##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B	0.424643	CTCF.p2:29:0.425
chr17	33390591	33390716	reg1019373.p1	5.338	+	TSC_hg19_v1_chr17_+_33307530 NM_002311 NM_013975 BC068005 AK300363 AK308407 U40671 X84740 BC009026	-83065	+	TSC_hg19_v1_chr17_+_33288558 AK315671 NM_052857 AK055707 AB590460 BC002913 BC011584 DQ892326 DQ895528	-102064	+	TSC_hg19_v1_chr17_-_33288480 AK302344 BC027591 NM_001193529 NM_001193530 NM_006584	-102151	-	TSC_hg19_v1_chr17_-_33390690 CR933651 NM_001017368	64	-	TSC_hg19_v1_chr17_-_33416298 AK093112 AX747930 BC028424	25658	-	AB464124 DQ892318 DQ895520 BC002723 AB013341 AB016223 AB016224 AB016225 Y15572 AF034956 BC014422 TSC_hg19_v1_chr17_-_33446836 AK296241 BX647297 AK301249	56092	-	NM_002311|LIG3|3980|ligase III, DNA, ATP-dependent##NM_013975|LIG3|3980|ligase III, DNA, ATP-dependent##BC068005|LIG3|3980|ligase III, DNA, ATP-dependent##AK300363|LIG3|3980|ligase III, DNA, ATP-dependent##AK308407|LIG3|3980|ligase III, DNA, ATP-dependent##U40671|LIG3|3980|ligase III, DNA, ATP-dependent##X84740|LIG3|3980|ligase III, DNA, ATP-dependent##BC009026|LIG3|3980|ligase III, DNA, ATP-dependent##AK315671|ZNF830|91603|zinc finger protein 830##NM_052857|ZNF830|91603|zinc finger protein 830##AK055707|ZNF830|91603|zinc finger protein 830##BC002913|ZNF830|91603|zinc finger protein 830##BC011584|ZNF830|91603|zinc finger protein 830##DQ892326|ZNF830|91603|zinc finger protein 830##DQ895528|ZNF830|91603|zinc finger protein 830##AK302344|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC027591|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193529|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193530|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_006584|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1##NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1##AK093112|RFFL|117584|ring finger and FYVE-like domain containing 1##BC028424|RFFL|117584|ring finger and FYVE-like domain containing 1##DQ892318|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##DQ895520|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC002723|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB013341|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016223|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016224|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016225|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##Y15572|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AF034956|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC014422|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK296241|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BX647297|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK301249|RAD51D|5892|RAD51 homolog D (S. cerevisiae)	0.0	
chr1	9294558	9294670	reg1022846.p2	5.338	+	DQ892804 DQ896051 TSC_hg19_v1_chr1_-_9189169 AK022194 AK292888 AK304154 AY768808 NM_024980 BC094733 BC018691	-105393	-	TSC_hg19_v1_chr1_-_9129695 M55531 AK290398 AK294368 NM_001135585 NM_003039	-164838	-	TSC_hg19_v1_chr1_-_9129644 AK289849 BC001692 BC001820 AK295785 BC035878	-164973	-	TSC_hg19_v1_chr1_+_9294832 BC081559	201	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	303	+	CR749282 TSC_hg19_v1_chr1_+_9299950	5324	+	DQ892804|GPR157|80045|G protein-coupled receptor 157##DQ896051|GPR157|80045|G protein-coupled receptor 157##AK022194|GPR157|80045|G protein-coupled receptor 157##AK292888|GPR157|80045|G protein-coupled receptor 157##AK304154|GPR157|80045|G protein-coupled receptor 157##AY768808|GPR157|80045|G protein-coupled receptor 157##NM_024980|GPR157|80045|G protein-coupled receptor 157##BC018691|GPR157|80045|G protein-coupled receptor 157##M55531|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK290398|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK294368|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_001135585|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_003039|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK289849|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001692|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001820|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK295785|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC035878|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##CR749282|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	0.96263	CTCF.p2:41:0.963
chr7	45299641	45299719	reg1001247.p1	5.338	+	NM_005856 TSC_hg19_v1_chr7_+_45197392 AJ001016 BC022304 BC053852 AK222469 DQ891371 CU691036 AK311871 AY265459	-102284	+	TSC_hg19_v1_chr7_-_45151297 AK300489 AL833840 AK001281 AB023165 NM_004749 NM_030900 NM_199122	-148368	-	BC017235 BC014918 AK022575 AK222943 TSC_hg19_v1_chr7_-_45151294	-148397	-	TSC_hg19_v1_chr7_+_45614105 AF497515 NM_021116	314422	+	AB209496 TSC_hg19_v1_chr7_+_45614187	314519	+	TSC_hg19_v1_chr7_-_45808577 AL832059 BC092503	508910	-	NM_005856|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AJ001016|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC022304|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC053852|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK222469|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##DQ891371|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK311871|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AY265459|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK300489|TBRG4|9238|transforming growth factor beta regulator 4##AL833840|TBRG4|9238|transforming growth factor beta regulator 4##AK001281|TBRG4|9238|transforming growth factor beta regulator 4##AB023165|TBRG4|9238|transforming growth factor beta regulator 4##NM_004749|TBRG4|9238|transforming growth factor beta regulator 4##NM_030900|TBRG4|9238|transforming growth factor beta regulator 4##NM_199122|TBRG4|9238|transforming growth factor beta regulator 4##BC017235|TBRG4|9238|transforming growth factor beta regulator 4##BC014918|TBRG4|9238|transforming growth factor beta regulator 4##AK022575|TBRG4|9238|transforming growth factor beta regulator 4##AK222943|TBRG4|9238|transforming growth factor beta regulator 4##AF497515|ADCY1|107|adenylate cyclase 1 (brain)##NM_021116|ADCY1|107|adenylate cyclase 1 (brain)##AB209496|ADCY1|107|adenylate cyclase 1 (brain)##AL832059|SEPT7P2|641977|septin 7 pseudogene 2##BC092503|SEPT7P2|641977|septin 7 pseudogene 2	0.0	
chr8	29360607	29360732	reg1025175.p2	5.338	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-152599	-	AL137704 NM_057158	-154348	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-240055	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	579805	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	579903	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	592274	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.82927	CTCF.p2:-1:0.829
chr9	140083097	140083277	reg1027442.p1	5.338	+	NM_003731 TSC_hg19_v1_chr9_+_140083127 BC000864 BC004118 Z96932 BT006766 CR542238 BC015827	-61	+	TSC_hg19_v1_chr9_-_140083038 NM_013366	-142	-	TSC_hg19_v1_chr9_-_140083013 AK294601	-172	-	TSC_hg19_v1_chr9_-_140095194 NM_001128228	12008	-	TSC_hg19_v1_chr9_-_140100101 AX775751 BC009283 BC009461 NM_053045 BC067786	16906	-	TSC_hg19_v1_chr9_+_140100154 NM_001144026 NM_001144027 NM_001144028 NM_014434 AK290026 AK026089 AK225995 AK074403 AF199509 BC015735 BC078668 AY077845 BC093782 BC111943 BC143229 AB463918 DQ892229 DQ895429	16982	+	NM_003731|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##BC000864|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##BC004118|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##Z96932|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##BT006766|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##CR542238|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##BC015827|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##NM_013366|ANAPC2|29882|anaphase promoting complex subunit 2##AK294601|ANAPC2|29882|anaphase promoting complex subunit 2##NM_001128228|TPRN|286262|taperin##AX775751|TMEM203|94107|transmembrane protein 203##BC009283|TMEM203|94107|transmembrane protein 203##BC009461|TMEM203|94107|transmembrane protein 203##NM_053045|TMEM203|94107|transmembrane protein 203##BC067786|TMEM203|94107|transmembrane protein 203##NM_001144026|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##NM_001144027|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##NM_001144028|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##NM_014434|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##AK290026|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##AK026089|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##AK225995|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##AK074403|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##AF199509|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##BC015735|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##BC078668|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##AY077845|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##BC093782|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##BC111943|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##BC143229|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##DQ892229|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##DQ895429|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1	0.101202	
chr6	35655087	35655268	reg1024832.p1	5.337	+	CU689498 EU446712 BC065261 NM_003322 BC032714 BC001761 BC021268 AB593124 AB593123 DQ426893	-174503	-	BC010053 BC027877 BC091488 AF142482 TSC_hg19_v1_chr6_-_35464854 NM_003214	-190365	-	AB082926 BC006791 U12404 TSC_hg19_v1_chr6_+_35436204 BC011366	-218974	+	TSC_hg19_v1_chr6_-_35656616 HM245391 AB209893	1443	-	TSC_hg19_v1_chr6_-_35656693 BC111050 AK222807 AK302704 AK303356 AK312422 BX647390 NM_001145776 AF194172 U71321 NM_001145777 NM_004117	1529	-	BC042605 NM_001145775	41182	-	EU446712|TULP1|7287|tubby like protein 1##BC065261|TULP1|7287|tubby like protein 1##NM_003322|TULP1|7287|tubby like protein 1##BC032714|TULP1|7287|tubby like protein 1##AB593124|TULP1|7287|tubby like protein 1##AB593123|TULP1|7287|tubby like protein 1##DQ426893|TULP1|7287|tubby like protein 1##BC010053|TEAD3|7005|TEA domain family member 3##BC027877|TEAD3|7005|TEA domain family member 3##BC091488|TEAD3|7005|TEA domain family member 3##AF142482|TEAD3|7005|TEA domain family member 3##NM_003214|TEAD3|7005|TEA domain family member 3##AB082926|RPL10A|4736|ribosomal protein L10a##BC006791|RPL10A|4736|ribosomal protein L10a##U12404|RPL10A|4736|ribosomal protein L10a##BC011366|RPL10A|4736|ribosomal protein L10a##HM245391|FKBP5|2289|FK506 binding protein 5##AB209893|FKBP5|2289|FK506 binding protein 5##BC111050|FKBP5|2289|FK506 binding protein 5##AK222807|FKBP5|2289|FK506 binding protein 5##AK302704|FKBP5|2289|FK506 binding protein 5##AK303356|FKBP5|2289|FK506 binding protein 5##AK312422|FKBP5|2289|FK506 binding protein 5##BX647390|FKBP5|2289|FK506 binding protein 5##NM_001145776|FKBP5|2289|FK506 binding protein 5##AF194172|FKBP5|2289|FK506 binding protein 5##U71321|FKBP5|2289|FK506 binding protein 5##NM_001145777|FKBP5|2289|FK506 binding protein 5##NM_004117|FKBP5|2289|FK506 binding protein 5##BC042605|FKBP5|2289|FK506 binding protein 5##NM_001145775|FKBP5|2289|FK506 binding protein 5	0.0	
chr6_qbl_hap6	3473817	3473955	reg1026641.p1	5.337	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999422	CTCF.p2:12:0.999
chr8	59147143	59147268	reg1025799.p2	5.337	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-240048	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1240779	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1240803	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	176680	+	X56088 M93133 BC101777 BC112184 NM_000780	265502	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	318547	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.019958	
chr2	178026512	178026660	reg1026801.p1	5.336	+	BC013438 TSC_hg19_v1_chr2_-_177502718	-523898	-	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-892347	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-973170	+	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	50888	+	AK311688 NM_001145412 NM_001145413	101985	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	102790	-	BC013438|LOC375295|375295|uncharacterized LOC375295##NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.503228	CTCF.p2:1:0.503
chr2	43249528	43249634	reg1026093.p1	5.336	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-229830	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-258281	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-453684	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	203764	-	TSC_hg19_v1_chr2_-_43453736 BC020369	204149	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	204161	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.964586	CTCF.p2:-11:0.965
chr7	12283889	12284006	reg1026833.p2	5.336	+	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	-33022	+	TSC_hg19_v1_chr7_-_11871825 AK092252 AX747433 NM_015204	-412158	-	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	-1270437	+	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	159585	-	NM_001135924	159904	-	AB067492 NM_001112706 AK290363 AK075123 TSC_hg19_v1_chr7_+_12610346 BC021090 AB590413 DQ892033 DQ895224 AF276507	326360	+	NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A##AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains##NM_001135924|VWDE|221806|von Willebrand factor D and EGF domains##AB067492|SCIN|85477|scinderin##NM_001112706|SCIN|85477|scinderin##AK290363|SCIN|85477|scinderin##AK075123|SCIN|85477|scinderin##BC021090|SCIN|85477|scinderin##DQ892033|SCIN|85477|scinderin##DQ895224|SCIN|85477|scinderin##AF276507|SCIN|85477|scinderin	0.971975	CTCF.p2:6:0.972
chr9	114836879	114837059	reg1000602.p1	5.336	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-177502	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-177855	+	AL833535 NM_173521	-291194	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	100551	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	258318	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	258880	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chr12	80991952	80992052	reg1026802.p1	5.335	+	NM_001145026	-153877	+	NM_173591	-388770	+	AF458589 BC092481 NM_001143885 NM_001244990	-662768	-	NM_002469 AK313287 X52011 BC017834 AB587443 CU676084 DQ893248 DQ896577 CR407641 CR541763	109450	+	TSC_hg19_v1_chr12_+_81110690 NM_005593 BC069373 X14894 AB528948 BT019399	118763	+	TSC_hg19_v1_chr12_-_81331470 AK309256	339465	-	NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q##NM_173591|OTOGL|283310|otogelin-like##AF458589|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##BC092481|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143885|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001244990|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_002469|MYF6|4618|myogenic factor 6 (herculin)##AK313287|MYF6|4618|myogenic factor 6 (herculin)##X52011|MYF6|4618|myogenic factor 6 (herculin)##BC017834|MYF6|4618|myogenic factor 6 (herculin)##DQ893248|MYF6|4618|myogenic factor 6 (herculin)##DQ896577|MYF6|4618|myogenic factor 6 (herculin)##CR407641|MYF6|4618|myogenic factor 6 (herculin)##CR541763|MYF6|4618|myogenic factor 6 (herculin)##NM_005593|MYF5|4617|myogenic factor 5##BC069373|MYF5|4617|myogenic factor 5##X14894|MYF5|4617|myogenic factor 5##BT019399|MYF5|4617|myogenic factor 5##AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)	0.694916	CTCF.p2:-1:0.695
chr1	416631	416747	reg1028894.p1	5.335	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-49041	+	NM_001005484	-347599	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-387284	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	205353	-	TSC_hg19_v1_chr1_-_714015 BC006361	297328	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	346206	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	0.168637	
chr1	45390885	45390990	reg1024852.p1	5.335	+	AF087651 AF091501 AY358555 AB527344 AY359016 AF119569 NM_001166292 NM_003738 BC143712	-82300	-	NM_001136537 TSC_hg19_v1_chr1_+_45274197 AK304611 AK056150	-116727	+	BC092499 DQ132441 NM_001013632	-117981	-	TSC_hg19_v1_chr1_-_45452256 BC021017 BC018728 AK022399 AF257077 BC014234 AL834288	61300	-	AK314668 TSC_hg19_v1_chr1_-_45452268 AK024006 NM_001166588 NM_020365	61376	-	TSC_hg19_v1_chr1_-_45476978 AK096462	86053	-	AF087651|PTCH2|8643|patched 2##AF091501|PTCH2|8643|patched 2##AY358555|PTCH2|8643|patched 2##AY359016|PTCH2|8643|patched 2##AF119569|PTCH2|8643|patched 2##NM_001166292|PTCH2|8643|patched 2##NM_003738|PTCH2|8643|patched 2##BC143712|PTCH2|8643|patched 2##NM_001136537|BTBD19|149478|BTB (POZ) domain containing 19##AK304611|BTBD19|149478|BTB (POZ) domain containing 19##AK056150|BTBD19|149478|BTB (POZ) domain containing 19##BC092499|TCTEX1D4|343521|Tctex1 domain containing 4##DQ132441|TCTEX1D4|343521|Tctex1 domain containing 4##NM_001013632|TCTEX1D4|343521|Tctex1 domain containing 4##BC021017|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##BC018728|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AK022399|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AF257077|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##BC014234|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AL834288|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AK314668|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AK024006|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##NM_001166588|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##NM_020365|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AK096462|HECTD3|79654|HECT domain containing 3	0.83301	CTCF.p2:5:0.833
chr5	177361394	177361505	reg1027161.p1	5.335	+	AB018295 NM_173663	-153965	-	TSC_hg19_v1_chr5_-_177099217 AK297457	-262220	-	TSC_hg19_v1_chr5_+_177027143 BC007317 NM_007255 BC072403 AY358578 BC062983 AB028600 AK023506 AF142675 DQ893010 DQ896256 AB527637 AJ005382	-334295	+	AF076215 NM_006261	61793	-	TSC_hg19_v1_chr5_+_177482580 AB055766	121129	+	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	179179	+	AB018295|FAM153A|285596|family with sequence similarity 153, member A##NM_173663|FAM153A|285596|family with sequence similarity 153, member A##AK297457|LOC202181|202181|chromosome 5 open reading frame 25 pseudogene##BC007317|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##NM_007255|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC072403|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AY358578|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC062983|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AB028600|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AK023506|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF142675|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ893010|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ896256|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AJ005382|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF076215|PROP1|5626|PROP paired-like homeobox 1##NM_006261|PROP1|5626|PROP paired-like homeobox 1##AB055766|RPL19|6143|ribosomal protein L19##BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3	0.386464	CTCF.p2:-22:0.386
chr6_mann_hap4	3742002	3742134	reg1022570.p1	5.335	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.943967	CTCF.p2:-46:0.944
chr4	10003916	10004060	reg1027643.p2	5.334	+	NM_000798	-220731	+	AF529414 NM_001040448	-557729	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-639135	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	19136	-	AK310895 BC018897 NM_001001290 AK096819	37934	-	TSC_hg19_v1_chr4_-_10118286 AB385044 CU674086 CU677992	114299	-	NM_000798|DRD5|1816|dopamine receptor D5##AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.0	
chr4	68854283	68854376	reg1025933.p1	5.334	+	AY498712 BC111796 AK292950 AF071882 AK131518 NM_001114387 NM_182606	-25142	-	AK296853 BC125195 BC125196 AB002134 NM_004262 AK290289	-104622	-	NM_000406 NM_001012763	-232526	-	AK122625 NM_207407	141257	-	AK123556 NM_001129907	229468	-	BC126195 AK310210 AL833167 BX537945 AK290904 NM_182502	257043	-	AY498712|TMPRSS11A|339967|transmembrane protease, serine 11A##BC111796|TMPRSS11A|339967|transmembrane protease, serine 11A##AK292950|TMPRSS11A|339967|transmembrane protease, serine 11A##AF071882|TMPRSS11A|339967|transmembrane protease, serine 11A##AK131518|TMPRSS11A|339967|transmembrane protease, serine 11A##NM_001114387|TMPRSS11A|339967|transmembrane protease, serine 11A##NM_182606|TMPRSS11A|339967|transmembrane protease, serine 11A##AK296853|TMPRSS11D|9407|transmembrane protease, serine 11D##BC125195|TMPRSS11D|9407|transmembrane protease, serine 11D##BC125196|TMPRSS11D|9407|transmembrane protease, serine 11D##AB002134|TMPRSS11D|9407|transmembrane protease, serine 11D##NM_004262|TMPRSS11D|9407|transmembrane protease, serine 11D##AK290289|TMPRSS11D|9407|transmembrane protease, serine 11D##NM_000406|GNRHR|2798|gonadotropin-releasing hormone receptor##NM_001012763|GNRHR|2798|gonadotropin-releasing hormone receptor##AK122625|TMPRSS11F|389208|transmembrane protease, serine 11F##NM_207407|TMPRSS11F|389208|transmembrane protease, serine 11F##AK123556|TMPRSS11BNL|401136|TMPRSS11B N terminal-like##NM_001129907|TMPRSS11BNL|401136|TMPRSS11B N terminal-like##BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B##AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B##AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B##BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B##AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B##NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B	0.999247	CTCF.p2:-20:0.999
chr6_cox_hap2	3870277	3870381	reg1014939.p1	5.334	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.943967	CTCF.p2:63:0.944
chr12	111872771	111872941	reg1025616.p1	5.333	+	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	-29107	+	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	-65946	-	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	-66010	-	AK126309 TSC_hg19_v1_chr12_-_111893987	21067	-	TSC_hg19_v1_chr12_-_112036257 AK095017	163419	-	TSC_hg19_v1_chr12_-_112036908 AK307803	164057	-	AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##AK095017|ATXN2|6311|ataxin 2##AK307803|ATXN2|6311|ataxin 2	0.0	
chr2	66240736	66240882	reg1028427.p1	5.333	+	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	-576972	+	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	-581133	-	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	-581597	-	AL832770 BC043503 NM_002398	421714	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	422031	+	TSC_hg19_v1_chr2_+_66666452 AK297109	425641	+	AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein##BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AL832770|MEIS1|4211|Meis homeobox 1##BC043503|MEIS1|4211|Meis homeobox 1##NM_002398|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##AK297109|MEIS1|4211|Meis homeobox 1	0.987469	CTCF.p2:5:0.921
chr4	76579145	76579268	reg1026945.p2	5.333	+	U35146 BC017417 AK294866 AK312490 NM_003948	-23561	-	AK074237 AK172776 BC117342 BC144003 BC144005 NM_001206981 NM_178497 AK300227 BC061701 HQ258050	-97933	+	NM_144721 TSC_hg19_v1_chr4_+_76439670 AK310575 AK056959 AK303658 AK308914 AK309187 AL833350 BX647579 AK313765	-139515	+	TSC_hg19_v1_chr4_-_76598333 AB014560 AK291786 NM_012297	19110	-	AF053535 AF145284 TSC_hg19_v1_chr4_-_76598560	19354	-	TSC_hg19_v1_chr4_-_76598595 BC011731 AK291772	19373	-	U35146|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##BC017417|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##AK294866|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##AK312490|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##NM_003948|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##AK074237|C4orf26|152816|chromosome 4 open reading frame 26##AK172776|C4orf26|152816|chromosome 4 open reading frame 26##BC117342|C4orf26|152816|chromosome 4 open reading frame 26##BC144003|C4orf26|152816|chromosome 4 open reading frame 26##BC144005|C4orf26|152816|chromosome 4 open reading frame 26##NM_001206981|C4orf26|152816|chromosome 4 open reading frame 26##NM_178497|C4orf26|152816|chromosome 4 open reading frame 26##AK300227|C4orf26|152816|chromosome 4 open reading frame 26##BC061701|C4orf26|152816|chromosome 4 open reading frame 26##HQ258050|C4orf26|152816|chromosome 4 open reading frame 26##NM_144721|THAP6|152815|THAP domain containing 6##AK310575|THAP6|152815|THAP domain containing 6##AK056959|THAP6|152815|THAP domain containing 6##AK303658|THAP6|152815|THAP domain containing 6##AK308914|THAP6|152815|THAP domain containing 6##AK309187|THAP6|152815|THAP domain containing 6##AL833350|THAP6|152815|THAP domain containing 6##BX647579|THAP6|152815|THAP domain containing 6##AK313765|THAP6|152815|THAP domain containing 6##AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	0.085747	
chr6	30565235	30565356	reg1029088.p1	5.333	+	AF027302 NM_001025091 NM_001090 TSC_hg19_v1_chr6_+_30539218 AK307551 BC034488 AK298061 BC112923 BC016772 DQ891255 DQ894817	-26079	+	NM_005275	-39925	-	TSC_hg19_v1_chr6_+_30525071 AK074531	-40187	+	AJ544537 AK307406 NM_002714 TSC_hg19_v1_chr6_-_30585021	19724	-	TSC_hg19_v1_chr6_-_30585024 BC150310	19758	-	NM_014046 TSC_hg19_v1_chr6_+_30585630 AF151017 BC005373 AK294086 AL050361 AK311890 AF100761 AB463890	20268	+	AF027302|ABCF1|23|ATP-binding cassette, sub-family F (GCN20), member 1##NM_001025091|ABCF1|23|ATP-binding cassette, sub-family F (GCN20), member 1##NM_001090|ABCF1|23|ATP-binding cassette, sub-family F (GCN20), member 1##AK307551|ABCF1|23|ATP-binding cassette, sub-family F (GCN20), member 1##BC034488|ABCF1|23|ATP-binding cassette, sub-family F (GCN20), member 1##AK298061|ABCF1|23|ATP-binding cassette, sub-family F (GCN20), member 1##BC112923|ABCF1|23|ATP-binding cassette, sub-family F (GCN20), member 1##BC016772|ABCF1|23|ATP-binding cassette, sub-family F (GCN20), member 1##DQ891255|ABCF1|23|ATP-binding cassette, sub-family F (GCN20), member 1##DQ894817|ABCF1|23|ATP-binding cassette, sub-family F (GCN20), member 1##NM_005275|GNL1|2794|guanine nucleotide binding protein-like 1##AK074531|PRR3|80742|proline rich 3##AJ544537|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10##AK307406|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10##NM_002714|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10##BC150310|PPP1R10|5514|protein phosphatase 1, regulatory subunit 10##NM_014046|MRPS18B|28973|mitochondrial ribosomal protein S18B##AF151017|MRPS18B|28973|mitochondrial ribosomal protein S18B##BC005373|MRPS18B|28973|mitochondrial ribosomal protein S18B##AK294086|MRPS18B|28973|mitochondrial ribosomal protein S18B##AL050361|MRPS18B|28973|mitochondrial ribosomal protein S18B##AK311890|MRPS18B|28973|mitochondrial ribosomal protein S18B##AF100761|MRPS18B|28973|mitochondrial ribosomal protein S18B	0.147186	
chr7	54841582	54841744	reg1006279.p1	5.333	+	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	-14742	-	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	-14784	-	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	-231581	+	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	245082	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	245283	+	AK095857 NM_018697	591477	+	AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit##NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor##AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	0.874556	CTCF.p2:-45:0.875
chr11	106592261	106592360	reg1024859.p1	5.332	+	NM_152433 NM_198439	-643846	-	AF136978 AF151057 AF151838 AF302110 NM_015423 TSC_hg19_v1_chr11_+_105948388 BC016728 AK312529 BC015470 AK293362 AB463408 CU677695 DQ891342 DQ894524	-643945	+	TSC_hg19_v1_chr11_-_105892952 AL834523 BC041118 AB058729 NM_032424	-699351	-	BC085622 TSC_hg19_v1_chr11_-_106889260 BC130484 BC130488 BC144033 NM_000855 X63282 Z50053	296778	-	AK293001 TSC_hg19_v1_chr11_-_107328552 BX649022 BX647832 BC107418 BC070142 BX648704 AK126881 NM_152434	736229	-	AK293603 TSC_hg19_v1_chr11_-_107436464 BC015183 AK304413 AB218768 AK095523 NM_138775	844134	-	NM_152433|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##NM_198439|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##AF136978|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151057|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151838|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF302110|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##NM_015423|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC016728|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK312529|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC015470|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK293362|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ891342|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ894524|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AL834523|KIAA1826|84437|KIAA1826##BC041118|KIAA1826|84437|KIAA1826##AB058729|KIAA1826|84437|KIAA1826##NM_032424|KIAA1826|84437|KIAA1826##BC130484|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC130488|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC144033|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_000855|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##X63282|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##Z50053|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##AK293001|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX649022|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX647832|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC107418|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC070142|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX648704|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK126881|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##NM_152434|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK293603|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##BC015183|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK304413|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AB218768|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK095523|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##NM_138775|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)	0.079801	
chr16	78512467	78512615	reg1027026.p1	5.332	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-379086	+	NM_001244755	-449556	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	-456091	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	1122074	-	AF125108 NM_130897 BC054892 BC035232	2062347	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	2325506	-	NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2	0.0	
chr6	135644460	135644609	reg1024295.p2	5.332	+	TSC_hg19_v1_chr6_+_135517056 X17469	-127445	+	TSC_hg19_v1_chr6_+_135516916 AJ616799	-127628	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	-141948	+	AY133243 TSC_hg19_v1_chr6_-_135818858 DQ090887	174291	-	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	174351	-	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	174430	+	X17469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY133243|AHI1|54806|Abelson helper integration site 1##DQ090887|AHI1|54806|Abelson helper integration site 1##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271	0.0	
chr7	5436220	5436324	reg1026678.p1	5.332	+	TSC_hg19_v1_chr7_+_5322595 AY485959 NM_001040661 NM_153247 AK092242 AX747426 AK296278 BC047592 BC025325	-113666	+	BC016912 AF151808 NM_001033520 AY691426	-182380	+	TSC_hg19_v1_chr7_+_5229923 AB463348 AM392901 AM393618 AM393628 CU675721 AY691425 CR533530	-206287	+	TSC_hg19_v1_chr7_-_5460842 BC140723	24634	-	AY129022 TSC_hg19_v1_chr7_-_5461555	25269	-	NM_001080495	26904	-	AY485959|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##NM_001040661|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##NM_153247|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AK092242|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AK296278|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC047592|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC025325|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC016912|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AF151808|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033520|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY691426|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM392901|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM393618|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM393628|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY691425|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##CR533530|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY129022|TNRC18|84629|trinucleotide repeat containing 18##NM_001080495|TNRC18|84629|trinucleotide repeat containing 18	0.437655	CTCF.p2:-4:0.438
chr14	21924466	21924647	reg1026528.p1	5.331	+	CR749315 TSC_hg19_v1_chr14_-_21905405 AK122910 NM_020920	-19128	-	NM_001170629	-24690	-	AK024072 NM_007192	-72132	-	AF091029 TSC_hg19_v1_chr14_-_21944789 AK300599	20232	-	TSC_hg19_v1_chr14_-_21944834 NM_001163380	20298	-	CU676744 DQ893243 DQ896572 AK027730 TSC_hg19_v1_chr14_-_21945094 AK296057 BX647601 BC066366 AK315354 AK307349 BC020839 AF468652 NM_032846	20533	-	CR749315|CHD8|57680|chromodomain helicase DNA binding protein 8##AK122910|CHD8|57680|chromodomain helicase DNA binding protein 8##NM_020920|CHD8|57680|chromodomain helicase DNA binding protein 8##NM_001170629|CHD8|57680|chromodomain helicase DNA binding protein 8##AK024072|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)##NM_007192|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)##AF091029|RAB2B|84932|RAB2B, member RAS oncogene family##AK300599|RAB2B|84932|RAB2B, member RAS oncogene family##NM_001163380|RAB2B|84932|RAB2B, member RAS oncogene family##DQ893243|RAB2B|84932|RAB2B, member RAS oncogene family##DQ896572|RAB2B|84932|RAB2B, member RAS oncogene family##AK027730|RAB2B|84932|RAB2B, member RAS oncogene family##AK296057|RAB2B|84932|RAB2B, member RAS oncogene family##BX647601|RAB2B|84932|RAB2B, member RAS oncogene family##BC066366|RAB2B|84932|RAB2B, member RAS oncogene family##AK315354|RAB2B|84932|RAB2B, member RAS oncogene family##AK307349|RAB2B|84932|RAB2B, member RAS oncogene family##BC020839|RAB2B|84932|RAB2B, member RAS oncogene family##AF468652|RAB2B|84932|RAB2B, member RAS oncogene family##NM_032846|RAB2B|84932|RAB2B, member RAS oncogene family	0.0	
chr6	52077983	52078123	reg1025375.p1	5.331	+	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	-26847	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	-125658	-	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-1291518	+	AF384857 JF305974 AB590713 BC070124 NM_052872	31208	-	AB528319 DQ893654 DQ895840 TSC_hg19_v1_chr6_-_52149506 AK312928 AK300754 X62153 AY032603	71438	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	71467	-	NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F##DQ893654|MCM3|4172|minichromosome maintenance complex component 3##DQ895840|MCM3|4172|minichromosome maintenance complex component 3##AK312928|MCM3|4172|minichromosome maintenance complex component 3##AK300754|MCM3|4172|minichromosome maintenance complex component 3##X62153|MCM3|4172|minichromosome maintenance complex component 3##AY032603|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3	0.241946	CTCF.p2:13:0.242
chr7	73959644	73959766	reg1027594.p2	5.331	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	-91270	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	-91397	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	-91541	+	AK292832 TSC_hg19_v1_chr7_+_74072028 AF015553 NM_001163636 NM_001518 NM_032999 NM_033000 NM_033001	112316	+	TSC_hg19_v1_chr7_+_74072046 BC070484	112339	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	112417	+	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AK292832|GTF2I|2969|general transcription factor IIi##AF015553|GTF2I|2969|general transcription factor IIi##NM_001163636|GTF2I|2969|general transcription factor IIi##NM_001518|GTF2I|2969|general transcription factor IIi##NM_032999|GTF2I|2969|general transcription factor IIi##NM_033000|GTF2I|2969|general transcription factor IIi##NM_033001|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi	0.999794	CTCF.p2:11:0.985
chr1	102235209	102235320	reg1028157.p1	5.330	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-532694	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-532883	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-743831	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	227223	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	227526	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1261519	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.906643	CTCF.p2:10:0.907
chr19	3849253	3849379	reg1030374.p1	5.330	+	AK055395 NM_002378	-47507	-	TSC_hg19_v1_chr19_-_3786423 BC000114 BC003109 NM_139354 NM_139355	-62905	-	L18974 TSC_hg19_v1_chr19_-_3786289 AL137754 AK315646 AB593100	-63019	-	AL365406 TSC_hg19_v1_chr19_-_3869037 AK295037 NM_001145640 NM_015174 BC034005	19723	-	NM_033064 TSC_hg19_v1_chr19_+_3880650	31319	+	TSC_hg19_v1_chr19_+_3880670 AB058775	31349	+	AK055395|MATK|4145|megakaryocyte-associated tyrosine kinase##NM_002378|MATK|4145|megakaryocyte-associated tyrosine kinase##BC000114|MATK|4145|megakaryocyte-associated tyrosine kinase##BC003109|MATK|4145|megakaryocyte-associated tyrosine kinase##NM_139354|MATK|4145|megakaryocyte-associated tyrosine kinase##NM_139355|MATK|4145|megakaryocyte-associated tyrosine kinase##L18974|MATK|4145|megakaryocyte-associated tyrosine kinase##AL137754|MATK|4145|megakaryocyte-associated tyrosine kinase##AK315646|MATK|4145|megakaryocyte-associated tyrosine kinase##AB593100|MATK|4145|megakaryocyte-associated tyrosine kinase##AL365406|ZFR2|23217|zinc finger RNA binding protein 2##AK295037|ZFR2|23217|zinc finger RNA binding protein 2##NM_001145640|ZFR2|23217|zinc finger RNA binding protein 2##NM_015174|ZFR2|23217|zinc finger RNA binding protein 2##BC034005|ZFR2|23217|zinc finger RNA binding protein 2##NM_033064|ATCAY|85300|ataxia, cerebellar, Cayman type##AB058775|ATCAY|85300|ataxia, cerebellar, Cayman type	1.328369	CTCF.p2:-3:0.983	CTCF.p2:81:0.345
chr20	5630840	5630935	reg1025812.p2	5.330	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	-39300	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-335851	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-523192	+	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	100179	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	261239	+	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	300236	-	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	0.0	
chr2	181105637	181105776	reg1029812.p1	5.330	+	BC031216 NM_020943 TSC_hg19_v1_chr2_-_180871834 AK025635 BC057826	-233892	-	TSC_hg19_v1_chr2_-_180726110 NM_152520	-379541	-	BC092423 TSC_hg19_v1_chr2_-_180726080	-379633	-	TSC_hg19_v1_chr2_+_181845341 NM_182678 NM_006357	739519	+	TSC_hg19_v1_chr2_+_181845369 BC092407	739664	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	739937	+	BC031216|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##NM_020943|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##AK025635|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##BC057826|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##NM_152520|ZNF385B|151126|zinc finger protein 385B##BC092423|ZNF385B|151126|zinc finger protein 385B##NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3	0.162485	
chr4	145496491	145496590	reg1024329.p1	5.330	+	AY950614 DQ893046 L07251 L07253 S77893 U00177 U00178 U00179 X57023 M12857 M36281 X51798 BC013328 EU338231 EU338232 EU338233 EU338234 L31860 X08054 BC005319 AK290561 NM_002099	-434695	-	AY509882 AY509883 AY950609 AY950610 AY950611 AY950612 U05255 J02982 BC121077 BC121078 EU338223 EU338224 EU338225 EU338226 EU338227 EU338228 EU338229 EU338230 EU338235 EU338236 EU338237 EU338238 BC069310 X08055 NM_002100	-556073	-	EU176664 BC064396 BC017864 M29610 NM_002102 NM_198682	-669853	-	NM_022475 AY009951 TSC_hg19_v1_chr4_+_145567307 AY009317 BC025311 BC015636 BC009298	70708	+	NM_001040876 NM_002940	522615	+	TSC_hg19_v1_chr4_-_146019349 AF132794 AL080090 BC005217 AB012109 NM_014885	522797	-	AY950614|GYPA|2993|glycophorin A (MNS blood group)##DQ893046|GYPA|2993|glycophorin A (MNS blood group)##L07251|GYPA|2993|glycophorin A (MNS blood group)##L07253|GYPA|2993|glycophorin A (MNS blood group)##U00177|GYPA|2993|glycophorin A (MNS blood group)##U00178|GYPA|2993|glycophorin A (MNS blood group)##U00179|GYPA|2993|glycophorin A (MNS blood group)##X57023|GYPA|2993|glycophorin A (MNS blood group)##M12857|GYPA|2993|glycophorin A (MNS blood group)##M36281|GYPA|2993|glycophorin A (MNS blood group)##X51798|GYPA|2993|glycophorin A (MNS blood group)##BC013328|GYPA|2993|glycophorin A (MNS blood group)##EU338231|GYPA|2993|glycophorin A (MNS blood group)##EU338232|GYPA|2993|glycophorin A (MNS blood group)##EU338233|GYPA|2993|glycophorin A (MNS blood group)##EU338234|GYPA|2993|glycophorin A (MNS blood group)##L31860|GYPA|2993|glycophorin A (MNS blood group)##X08054|GYPA|2993|glycophorin A (MNS blood group)##BC005319|GYPA|2993|glycophorin A (MNS blood group)##AK290561|GYPA|2993|glycophorin A (MNS blood group)##NM_002099|GYPA|2993|glycophorin A (MNS blood group)##AY509882|GYPB|2994|glycophorin B (MNS blood group)##AY509883|GYPB|2994|glycophorin B (MNS blood group)##AY950609|GYPB|2994|glycophorin B (MNS blood group)##AY950610|GYPB|2994|glycophorin B (MNS blood group)##AY950611|GYPB|2994|glycophorin B (MNS blood group)##U05255|GYPB|2994|glycophorin B (MNS blood group)##J02982|GYPB|2994|glycophorin B (MNS blood group)##BC121077|GYPB|2994|glycophorin B (MNS blood group)##BC121078|GYPB|2994|glycophorin B (MNS blood group)##EU338223|GYPB|2994|glycophorin B (MNS blood group)##EU338224|GYPB|2994|glycophorin B (MNS blood group)##EU338225|GYPB|2994|glycophorin B (MNS blood group)##EU338226|GYPB|2994|glycophorin B (MNS blood group)##EU338227|GYPB|2994|glycophorin B (MNS blood group)##EU338228|GYPB|2994|glycophorin B (MNS blood group)##EU338229|GYPB|2994|glycophorin B (MNS blood group)##EU338230|GYPB|2994|glycophorin B (MNS blood group)##EU338235|GYPB|2994|glycophorin B (MNS blood group)##EU338236|GYPB|2994|glycophorin B (MNS blood group)##EU338237|GYPB|2994|glycophorin B (MNS blood group)##EU338238|GYPB|2994|glycophorin B (MNS blood group)##BC069310|GYPB|2994|glycophorin B (MNS blood group)##X08055|GYPB|2994|glycophorin B (MNS blood group)##NM_002100|GYPB|2994|glycophorin B (MNS blood group)##EU176664|GYPE|2996|glycophorin E (MNS blood group)##BC064396|GYPE|2996|glycophorin E (MNS blood group)##BC017864|GYPE|2996|glycophorin E (MNS blood group)##M29610|GYPE|2996|glycophorin E (MNS blood group)##NM_002102|GYPE|2996|glycophorin E (MNS blood group)##NM_198682|GYPE|2996|glycophorin E (MNS blood group)##NM_022475|HHIP|64399|hedgehog interacting protein##AY009951|HHIP|64399|hedgehog interacting protein##AY009317|HHIP|64399|hedgehog interacting protein##BC025311|HHIP|64399|hedgehog interacting protein##BC015636|HHIP|64399|hedgehog interacting protein##BC009298|HHIP|64399|hedgehog interacting protein##NM_001040876|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##NM_002940|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##AF132794|ANAPC10|10393|anaphase promoting complex subunit 10##AL080090|ANAPC10|10393|anaphase promoting complex subunit 10##BC005217|ANAPC10|10393|anaphase promoting complex subunit 10##AB012109|ANAPC10|10393|anaphase promoting complex subunit 10##NM_014885|ANAPC10|10393|anaphase promoting complex subunit 10	0.0	
chr8	91657202	91657328	reg1026771.p1	5.330	+	AB529128 X06661 BC006478 AK054881 AK312491 BC020864 NM_004929	-562250	-	NM_001359 BC105080 BC105082 BC143669 TSC_hg19_v1_chr8_+_91013704 AK300069 L26050	-643616	+	TSC_hg19_v1_chr8_-_90996896 AK001017 AK289848 BC071590 BC040519 BX640816 NM_002485 AK312410	-660361	-	AK300583 AK123958 AL834364 TSC_hg19_v1_chr8_-_91657856	533	-	TSC_hg19_v1_chr8_-_91657970 AY147881 NM_001008495 NM_001146273	750	-	AF414126 TSC_hg19_v1_chr8_+_91803956 NM_022351 AK095533 BC068448 AY224210	146680	+	X06661|CALB1|793|calbindin 1, 28kDa##BC006478|CALB1|793|calbindin 1, 28kDa##AK054881|CALB1|793|calbindin 1, 28kDa##AK312491|CALB1|793|calbindin 1, 28kDa##BC020864|CALB1|793|calbindin 1, 28kDa##NM_004929|CALB1|793|calbindin 1, 28kDa##NM_001359|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105080|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105082|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC143669|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK300069|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##L26050|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK001017|NBN|4683|nibrin##AK289848|NBN|4683|nibrin##BC071590|NBN|4683|nibrin##BC040519|NBN|4683|nibrin##BX640816|NBN|4683|nibrin##NM_002485|NBN|4683|nibrin##AK312410|NBN|4683|nibrin##AK300583|TMEM64|169200|transmembrane protein 64##AK123958|TMEM64|169200|transmembrane protein 64##AL834364|TMEM64|169200|transmembrane protein 64##AY147881|TMEM64|169200|transmembrane protein 64##NM_001008495|TMEM64|169200|transmembrane protein 64##NM_001146273|TMEM64|169200|transmembrane protein 64##AF414126|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##NM_022351|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AK095533|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##BC068448|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AY224210|NECAB1|64168|N-terminal EF-hand calcium binding protein 1	0.0	
chr9	102581654	102581834	reg1025593.p2	5.330	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-597157	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-597501	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-597527	-	TSC_hg19_v1_chr9_-_102582187 AK057451	421	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	2413	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	87183	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.0	
chr11	765399	765537	reg1027082.p2	5.329	+	TSC_hg19_v1_chr11_+_747461 AK295537 AK313427 AK130060 AB528639 CU679621 BC018847	-18002	+	TSC_hg19_v1_chr11_+_747430 L19437 NM_006755	-18034	+	TSC_hg19_v1_chr11_+_747426 BC010103 BC009680	-18043	+	BC110868 TSC_hg19_v1_chr11_-_777488 BC143419 BC112145 BC143415 BC143416 BC143418 BC143420 BC143421 BC143422 BC143423 AK091602 AX747087 AK309153 AK092816 AK293559 AX747745 NM_182612 AK128653	12027	-	TSC_hg19_v1_chr11_-_790103 BC034732 AK074547 AK312993 NM_016564	24646	-	AB528574 CU676356 DQ892920 DQ895939 AJ428202 AK023106 TSC_hg19_v1_chr11_-_795170	29620	-	AK295537|TALDO1|6888|transaldolase 1##AK313427|TALDO1|6888|transaldolase 1##BC018847|TALDO1|6888|transaldolase 1##L19437|TALDO1|6888|transaldolase 1##NM_006755|TALDO1|6888|transaldolase 1##BC010103|TALDO1|6888|transaldolase 1##BC009680|TALDO1|6888|transaldolase 1##BC110868|PDDC1|347862|Parkinson disease 7 domain containing 1##BC143419|PDDC1|347862|Parkinson disease 7 domain containing 1##BC112145|PDDC1|347862|Parkinson disease 7 domain containing 1##BC143415|PDDC1|347862|Parkinson disease 7 domain containing 1##BC143416|PDDC1|347862|Parkinson disease 7 domain containing 1##BC143418|PDDC1|347862|Parkinson disease 7 domain containing 1##BC143420|PDDC1|347862|Parkinson disease 7 domain containing 1##BC143421|PDDC1|347862|Parkinson disease 7 domain containing 1##BC143422|PDDC1|347862|Parkinson disease 7 domain containing 1##BC143423|PDDC1|347862|Parkinson disease 7 domain containing 1##AK091602|PDDC1|347862|Parkinson disease 7 domain containing 1##AK309153|PDDC1|347862|Parkinson disease 7 domain containing 1##AK092816|PDDC1|347862|Parkinson disease 7 domain containing 1##AK293559|PDDC1|347862|Parkinson disease 7 domain containing 1##NM_182612|PDDC1|347862|Parkinson disease 7 domain containing 1##AK128653|PDDC1|347862|Parkinson disease 7 domain containing 1##BC034732|CEND1|51286|cell cycle exit and neuronal differentiation 1##AK074547|CEND1|51286|cell cycle exit and neuronal differentiation 1##AK312993|CEND1|51286|cell cycle exit and neuronal differentiation 1##NM_016564|CEND1|51286|cell cycle exit and neuronal differentiation 1##DQ892920|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22##DQ895939|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22##AJ428202|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22##AK023106|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22	0.99528	CTCF.p2:8:0.995
chr16	30539156	30539317	reg1020129.p3	5.329	+	TSC_hg19_v1_chr16_-_30538096 AK295274	-1154	-	TSC_hg19_v1_chr16_-_30537922 BC013760 NM_024671	-1345	-	AK027089 AK315449 TSC_hg19_v1_chr16_-_30537813 BC092403	-1486	-	TSC_hg19_v1_chr16_-_30546003 AK292192	6764	-	TSC_hg19_v1_chr16_-_30546234 AB209546 AK299308 AK054567 BC001361 NM_023931 AK316254	6954	-	EU446557 BC008821 AK093992 AX748400 NM_001172679 NM_033410 TSC_hg19_v1_chr16_-_30569709	30372	-	AK295274|ZNF768|79724|zinc finger protein 768##BC013760|ZNF768|79724|zinc finger protein 768##NM_024671|ZNF768|79724|zinc finger protein 768##AK027089|ZNF768|79724|zinc finger protein 768##AK315449|ZNF768|79724|zinc finger protein 768##BC092403|ZNF768|79724|zinc finger protein 768##AK292192|ZNF747|65988|zinc finger protein 747##AB209546|ZNF747|65988|zinc finger protein 747##AK054567|ZNF747|65988|zinc finger protein 747##BC001361|ZNF747|65988|zinc finger protein 747##NM_023931|ZNF747|65988|zinc finger protein 747##EU446557|ZNF764|92595|zinc finger protein 764##BC008821|ZNF764|92595|zinc finger protein 764##AK093992|ZNF764|92595|zinc finger protein 764##NM_001172679|ZNF764|92595|zinc finger protein 764##NM_033410|ZNF764|92595|zinc finger protein 764	0.010091	
chr2	105904322	105904452	reg1026436.p1	5.329	+	BC066879 BC066880 BC067455 NM_007227 CU688176 EU883573	-46130	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	-249873	+	TSC_hg19_v1_chr2_+_105471877 NM_006236	-432489	+	TSC_hg19_v1_chr2_-_105946156 BC020548 BC010093 NM_001142621 NM_004257	41765	-	AK304268 TSC_hg19_v1_chr2_+_105953980 AK307891	49523	+	TSC_hg19_v1_chr2_+_105954010 AK127661 BC001310 NM_024093 DQ891212 DQ894395	49637	+	BC066879|GPR45|11250|G protein-coupled receptor 45##BC066880|GPR45|11250|G protein-coupled receptor 45##BC067455|GPR45|11250|G protein-coupled receptor 45##NM_007227|GPR45|11250|G protein-coupled receptor 45##EU883573|GPR45|11250|G protein-coupled receptor 45##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9##NM_006236|POU3F3|5455|POU class 3 homeobox 3##BC020548|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_001142621|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_004257|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##AK304268|C2orf49|79074|chromosome 2 open reading frame 49##AK307891|C2orf49|79074|chromosome 2 open reading frame 49##AK127661|C2orf49|79074|chromosome 2 open reading frame 49##BC001310|C2orf49|79074|chromosome 2 open reading frame 49##NM_024093|C2orf49|79074|chromosome 2 open reading frame 49##DQ891212|C2orf49|79074|chromosome 2 open reading frame 49##DQ894395|C2orf49|79074|chromosome 2 open reading frame 49	0.386082	CTCF.p2:-10:0.386
chr6_mann_hap4	3040152	3040249	reg1026323.p1	5.329	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.016416	
chr8	23842031	23842155	reg1026613.p1	5.329	+	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	-129782	-	AB464642 NM_001136271	-277983	-	AB464643 AF249669 AF249670 AF249671 AF249672 EU446642 U91540 U80669 BC074863 BC074864 BC111569 BC111574 AF247704 NM_006167 TSC_hg19_v1_chr8_-_23540449	-301662	-	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	309514	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	399814	+	BC058037 AK292492 NM_003817 AF215824 CU691292 AB527100	456438	+	BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1##AB464642|NKX2-6|137814|NK2 homeobox 6##NM_001136271|NKX2-6|137814|NK2 homeobox 6##AF249669|NKX3-1|4824|NK3 homeobox 1##AF249670|NKX3-1|4824|NK3 homeobox 1##AF249671|NKX3-1|4824|NK3 homeobox 1##AF249672|NKX3-1|4824|NK3 homeobox 1##EU446642|NKX3-1|4824|NK3 homeobox 1##U91540|NKX3-1|4824|NK3 homeobox 1##U80669|NKX3-1|4824|NK3 homeobox 1##BC074863|NKX3-1|4824|NK3 homeobox 1##BC074864|NKX3-1|4824|NK3 homeobox 1##AF247704|NKX3-1|4824|NK3 homeobox 1##NM_006167|NKX3-1|4824|NK3 homeobox 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1##BC058037|ADAM7|8756|ADAM metallopeptidase domain 7##AK292492|ADAM7|8756|ADAM metallopeptidase domain 7##NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7##AF215824|ADAM7|8756|ADAM metallopeptidase domain 7	0.999558	CTCF.p2:0:1.000
chr12	114404253	114404370	reg1026617.p1	5.328	+	CU678656 EU831458 EU831545 AB385372 AB014582 BC004289 BC006137 AL117547 TSC_hg19_v1_chr12_-_114404131 AK291444 AK314606 NM_001146698 NM_001146699 NM_016196	-207	-	AF291181 NM_022363	-494435	-	TSC_hg19_v1_chr12_+_113860217 BC009849 NM_138432 BC091479 AF134473	-544114	+	NM_080718 U80987 U89353 AB527531 EU446658	437393	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	439613	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	441907	-	EU831458|RBM19|9904|RNA binding motif protein 19##EU831545|RBM19|9904|RNA binding motif protein 19##AB014582|RBM19|9904|RNA binding motif protein 19##BC004289|RBM19|9904|RNA binding motif protein 19##BC006137|RBM19|9904|RNA binding motif protein 19##AL117547|RBM19|9904|RNA binding motif protein 19##AK291444|RBM19|9904|RNA binding motif protein 19##AK314606|RBM19|9904|RNA binding motif protein 19##NM_001146698|RBM19|9904|RNA binding motif protein 19##NM_001146699|RBM19|9904|RNA binding motif protein 19##NM_016196|RBM19|9904|RNA binding motif protein 19##AF291181|LHX5|64211|LIM homeobox 5##NM_022363|LHX5|64211|LIM homeobox 5##BC009849|SDSL|113675|serine dehydratase-like##NM_138432|SDSL|113675|serine dehydratase-like##BC091479|SDSL|113675|serine dehydratase-like##AF134473|SDSL|113675|serine dehydratase-like##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5	0.144444	
chr15	27109974	27110091	reg1023956.p1	5.328	+	TSC_hg19_v1_chr15_-_27018924 AK315311 NM_021912	-91107	-	TSC_hg19_v1_chr15_-_27018219 NM_000814	-91806	-	M82919 TSC_hg19_v1_chr15_-_27018181 BC010641	-91854	-	NM_000810	1833	+	L08485 AK290453 TSC_hg19_v1_chr15_+_27112237 NM_001165037	2204	+	NM_033223 BC029850 BC045709 S82769	106515	+	AK315311|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_021912|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_000814|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##M82919|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##BC010641|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_000810|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##L08485|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AK290453|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_001165037|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3	0.935125	CTCF.p2:35:0.935
chr12	25005498	25005601	reg1027448.p1	5.327	+	BC104436 BC104437 TSC_hg19_v1_chr12_-_24737100 AK057456	-268456	-	TSC_hg19_v1_chr12_-_24715349 AB081588 NM_152989 BC060773	-290184	-	BC014929 TSC_hg19_v1_chr12_-_24103967 AK303970	-901588	-	TSC_hg19_v1_chr12_-_25055230 CR749308 BC033864 NM_001178094	49725	-	TSC_hg19_v1_chr12_-_25055966 AK294879 NM_001178093	50438	-	TSC_hg19_v1_chr12_-_25101988 AK299088	96407	-	BC104436|LINC00477|144360|long intergenic non-protein coding RNA 477##BC104437|LINC00477|144360|long intergenic non-protein coding RNA 477##AK057456|LINC00477|144360|long intergenic non-protein coding RNA 477##AB081588|SOX5|6660|SRY (sex determining region Y)-box 5##NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5##BC060773|SOX5|6660|SRY (sex determining region Y)-box 5##BC014929|SOX5|6660|SRY (sex determining region Y)-box 5##AK303970|SOX5|6660|SRY (sex determining region Y)-box 5##CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK294879|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178093|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK299088|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	0.973089	CTCF.p2:-5:0.973
chr12	60174642	60174783	reg1027888.p2	5.327	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	-91573	+	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	-184795	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-860410	-	BC050347 NM_178539	2411871	-	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	2479472	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	2685867	+	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)	0.936417	CTCF.p2:11:0.936
chr16	11707834	11708014	reg1029165.p2	5.327	+	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	-27135	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	-27737	-	TSC_hg19_v1_chr16_+_11439315 BC013040	-268606	+	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	54374	+	TSC_hg19_v1_chr16_-_11836686 AK297094 BX648407 AK027646 NM_015914 BC002856 BC018635	128732	-	BC046363 BC036857 TSC_hg19_v1_chr16_-_11891096 AK091803 AX747194	183127	-	BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin##AK297094|TXNDC11|51061|thioredoxin domain containing 11##BX648407|TXNDC11|51061|thioredoxin domain containing 11##AK027646|TXNDC11|51061|thioredoxin domain containing 11##NM_015914|TXNDC11|51061|thioredoxin domain containing 11##BC002856|TXNDC11|51061|thioredoxin domain containing 11##BC018635|TXNDC11|51061|thioredoxin domain containing 11##BC046363|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC036857|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK091803|ZC3H7A|29066|zinc finger CCCH-type containing 7A	0.0	
chr19	17236216	17236397	reg1021598.p1	5.327	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-49713	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-49985	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-98766	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	89866	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	89899	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	100728	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.0	
chr3	180397951	180398053	reg1028139.p1	5.327	+	AK304270 NM_181426	-731	-	AB075860 TSC_hg19_v1_chr3_+_180320970	-77039	+	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	-77999	+	TSC_hg19_v1_chr3_+_180630246 NM_001013438 NM_001013439 NM_005087	232181	+	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	232476	+	NM_001190233 TSC_hg19_v1_chr3_-_180707525 AK311765 BC073989 BC009702 AK309019 AK307097 NM_145261	309431	-	AK304270|CCDC39|339829|coiled-coil domain containing 39##NM_181426|CCDC39|339829|coiled-coil domain containing 39##AB075860|TTC14|151613|tetratricopeptide repeat domain 14##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##NM_001013438|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013439|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_005087|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001190233|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK311765|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC073989|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC009702|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK307097|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##NM_145261|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19	0.012792	
chr5	11075200	11075346	reg1027366.p1	5.327	+	TSC_hg19_v1_chr5_-_10761361 NM_004394	-313874	-	TSC_hg19_v1_chr5_-_10761341 BC002726	-313931	-	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	-314014	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	828763	-	TSC_hg19_v1_chr5_-_11904184 AK296232	828911	-	AX800026 AY045575 NM_001369	2869315	-	NM_004394|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5	0.054356	
chr5	126334170	126334314	reg1025580.p1	5.327	+	TSC_hg19_v1_chr5_+_126113050 AB527547 DQ891592 EU176582 CU680274	-221118	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	-221360	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	-221411	+	BC146948 BC146964 AF055007 TSC_hg19_v1_chr5_-_126366251 BC047569 AK290129	31933	-	NM_178450	32197	-	AK126569 NM_001164478 NM_001164479	74935	-	DQ891592|LMNB1|4001|lamin B1##EU176582|LMNB1|4001|lamin B1##AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1##BC146948|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146964|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AF055007|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC047569|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK290129|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63	0.052473	
chr7	96505679	96505773	reg1028007.p2	5.327	+	TSC_hg19_v1_chr7_-_96339174 AK291070 NM_006304 U41515	-166540	-	CR456887 TSC_hg19_v1_chr7_-_96339159 AK309241 BC032782	-166608	-	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	-372899	-	TSC_hg19_v1_chr7_-_96633611 AK091367 AX746939 BC101445 BC101446 BC101447 BC101985 BC113049	127885	-	NM_005222	129563	+	BC006226 TSC_hg19_v1_chr7_-_96654144 AK023493 NM_005221 AK297614	148468	-	AK291070|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##NM_006304|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##U41515|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##CR456887|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##AK309241|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##BC032782|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK091367|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101445|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101446|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101447|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101985|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC113049|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##NM_005222|DLX6|1750|distal-less homeobox 6##BC006226|DLX5|1749|distal-less homeobox 5##AK023493|DLX5|1749|distal-less homeobox 5##NM_005221|DLX5|1749|distal-less homeobox 5##AK297614|DLX5|1749|distal-less homeobox 5	0.017335	
chr10	15627397	15627490	reg1026431.p2	5.326	+	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	-214294	-	BT007024 CU675371 DQ890667 DQ893848 BC006376 AK315085 AK094904 AF043325 TSC_hg19_v1_chr10_-_15210693 NM_004808	-416782	-	BC157831 BC171823 TSC_hg19_v1_chr10_-_15197364	-430088	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	134350	-	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	275048	-	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	851542	+	AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##BT007024|NMT2|9397|N-myristoyltransferase 2##DQ890667|NMT2|9397|N-myristoyltransferase 2##DQ893848|NMT2|9397|N-myristoyltransferase 2##BC006376|NMT2|9397|N-myristoyltransferase 2##AK315085|NMT2|9397|N-myristoyltransferase 2##AK094904|NMT2|9397|N-myristoyltransferase 2##AF043325|NMT2|9397|N-myristoyltransferase 2##NM_004808|NMT2|9397|N-myristoyltransferase 2##BC157831|LOC100192204|100192204|peptidylprolyl isomerase A (cyclophilin A) pseudogene##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related	0.904329	CTCF.p2:-8:0.904
chr11	126839903	126840040	reg1030132.p1	5.326	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	-563973	+	NM_006278 X74570	-613876	+	TSC_hg19_v1_chr11_-_126225452 AK096370	-614508	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	30689	-	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	30754	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	33334	+	AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK096370|FLJ39051|399972|uncharacterized LOC399972##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)	0.0	
chr12	100204613	100204723	reg1027524.p2	5.326	+	NM_153364 AK312767 BC031221	-163138	+	AK294191 NM_001204067	-655801	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	-656111	-	NM_152788	173763	-	BC127017 AK125813 TSC_hg19_v1_chr12_-_100536637 BC014891	331881	-	TSC_hg19_v1_chr12_-_100536644 NM_001006947 NM_015054	331980	-	NM_153364|FAM71C|196472|family with sequence similarity 71, member C##AK312767|FAM71C|196472|family with sequence similarity 71, member C##BC031221|FAM71C|196472|family with sequence similarity 71, member C##AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_152788|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC127017|UHRF1BP1L|23074|UHRF1 binding protein 1-like##AK125813|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC014891|UHRF1BP1L|23074|UHRF1 binding protein 1-like##NM_001006947|UHRF1BP1L|23074|UHRF1 binding protein 1-like##NM_015054|UHRF1BP1L|23074|UHRF1 binding protein 1-like	0.486341	CTCF.p2:0:0.486
chr1	26718078	26718209	reg1025185.p1	5.326	+	BC028731 BC029505 NM_001114759 NM_173574	-18898	-	AK000902 NM_001039775	-37523	-	NM_145345 AK097368	-73339	-	TSC_hg19_v1_chr1_+_26737262 BC028566 NM_024674	19108	+	TSC_hg19_v1_chr1_+_26737312 AF521099 AK022519 DQ893398 DQ896719 AB528435 CU688506	19200	+	BX648507 NM_001243564 NM_001243565 NM_024887 NM_205861 TSC_hg19_v1_chr1_+_26758838 AK308187 AK316485 BC004117 AK023164 AK297134	40702	+	BC028731|ZNF683|257101|zinc finger protein 683##BC029505|ZNF683|257101|zinc finger protein 683##NM_001114759|ZNF683|257101|zinc finger protein 683##NM_173574|ZNF683|257101|zinc finger protein 683##AK000902|AIM1L|55057|absent in melanoma 1-like##NM_001039775|AIM1L|55057|absent in melanoma 1-like##NM_145345|UBXN11|91544|UBX domain protein 11##AK097368|UBXN11|91544|UBX domain protein 11##BC028566|LIN28A|79727|lin-28 homolog A (C. elegans)##NM_024674|LIN28A|79727|lin-28 homolog A (C. elegans)##AF521099|LIN28A|79727|lin-28 homolog A (C. elegans)##AK022519|LIN28A|79727|lin-28 homolog A (C. elegans)##DQ893398|LIN28A|79727|lin-28 homolog A (C. elegans)##DQ896719|LIN28A|79727|lin-28 homolog A (C. elegans)##BX648507|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_001243564|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_001243565|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_024887|DHDDS|79947|dehydrodolichyl diphosphate synthase##NM_205861|DHDDS|79947|dehydrodolichyl diphosphate synthase##AK308187|DHDDS|79947|dehydrodolichyl diphosphate synthase##AK316485|DHDDS|79947|dehydrodolichyl diphosphate synthase##BC004117|DHDDS|79947|dehydrodolichyl diphosphate synthase##AK023164|DHDDS|79947|dehydrodolichyl diphosphate synthase##AK297134|DHDDS|79947|dehydrodolichyl diphosphate synthase	0.880054	CTCF.p2:17:0.880
chr3	45701661	45701769	reg1023756.p2	5.326	+	TSC_hg19_v1_chr3_+_45636176 BC117236 BC117238 NM_014240 AJ132408 HQ258355	-65444	+	TSC_hg19_v1_chr3_+_45635397 M80651	-66130	+	AK308146 BC025989 TSC_hg19_v1_chr3_+_45430067 D21851 NM_015340	-271651	+	CR749564 TSC_hg19_v1_chr3_+_45730767 NM_014016	29018	+	TSC_hg19_v1_chr3_+_45730846 AK291142	29142	+	TSC_hg19_v1_chr3_+_45730887 AB020658 AK301248	29174	+	BC117236|LIMD1|8994|LIM domains containing 1##BC117238|LIMD1|8994|LIM domains containing 1##NM_014240|LIMD1|8994|LIM domains containing 1##AJ132408|LIMD1|8994|LIM domains containing 1##HQ258355|LIMD1|8994|LIM domains containing 1##M80651|LIMD1|8994|LIM domains containing 1##AK308146|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##BC025989|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##D21851|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015340|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##CR749564|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##NM_014016|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK291142|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AB020658|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK301248|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	0.370617	CTCF.p2:-6:0.371
chr6	51434553	51434661	reg1027562.p1	5.326	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-648072	+	AY028376 NM_172238	-753351	+	DQ012016 NM_001037498	-1418244	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	517788	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	616599	+	AF384857 JF305974 AB590713 BC070124 NM_052872	674654	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.0	
chr8	126517832	126517949	reg1021519.p1	5.326	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-75311	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-413793	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-413833	-	TSC_hg19_v1_chr8_-_126963395 BX648371	445523	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	1052665	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	1052834	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.311685	CTCF.p2:15:0.312
chrX	33355047	33355150	reg1026073.p1	5.326	+	S60972 X14298 AK309142 TSC_hg19_v1_chrX_-_33229631 M18533 BC010932 NM_004006	-125548	-	NM_004010 S81419 NM_004009 S64152	-208555	-	NM_004011 NM_004012	-924728	-	NM_000109	2627	-	BC026171 AK292354 NM_203408	795338	-	TSC_hg19_v1_chrX_-_34675406 BC039242 NM_031442	1320310	-	S60972|DMD|1756|dystrophin##X14298|DMD|1756|dystrophin##AK309142|DMD|1756|dystrophin##M18533|DMD|1756|dystrophin##BC010932|DMD|1756|dystrophin##NM_004006|DMD|1756|dystrophin##NM_004010|DMD|1756|dystrophin##S81419|DMD|1756|dystrophin##NM_004009|DMD|1756|dystrophin##S64152|DMD|1756|dystrophin##NM_004011|DMD|1756|dystrophin##NM_004012|DMD|1756|dystrophin##NM_000109|DMD|1756|dystrophin##BC026171|FAM47A|158724|family with sequence similarity 47, member A##AK292354|FAM47A|158724|family with sequence similarity 47, member A##NM_203408|FAM47A|158724|family with sequence similarity 47, member A##BC039242|TMEM47|83604|transmembrane protein 47##NM_031442|TMEM47|83604|transmembrane protein 47	0.914396	CTCF.p2:7:0.914
chr11	71251624	71251721	reg1024403.p1	5.325	+	AB126077 NM_021046 AY360461	-2587	+	AB126076 NM_001012503 BC136967 BC136968 AB528865 BC119736	-13343	+	AK225700 TSC_hg19_v1_chr11_+_71164286 AK001493 AB091316 CR457286	-87370	+	NM_005553 X63755 BC101744 AB126078 CU686892 BC069531	7912	+	AB126079 BC137550 BC137566 NM_001012710	24936	+	BC130498 BC130502 AB126080 NM_001005405	42242	-	AB126077|KRTAP5-8|57830|keratin associated protein 5-8##NM_021046|KRTAP5-8|57830|keratin associated protein 5-8##AY360461|KRTAP5-8|57830|keratin associated protein 5-8##AB126076|KRTAP5-7|440050|keratin associated protein 5-7##NM_001012503|KRTAP5-7|440050|keratin associated protein 5-7##BC136967|KRTAP5-7|440050|keratin associated protein 5-7##BC136968|KRTAP5-7|440050|keratin associated protein 5-7##AK225700|NADSYN1|55191|NAD synthetase 1##AK001493|NADSYN1|55191|NAD synthetase 1##AB091316|NADSYN1|55191|NAD synthetase 1##CR457286|NADSYN1|55191|NAD synthetase 1##NM_005553|KRTAP5-9|3846|keratin associated protein 5-9##X63755|KRTAP5-9|3846|keratin associated protein 5-9##BC101744|KRTAP5-9|3846|keratin associated protein 5-9##AB126078|KRTAP5-9|3846|keratin associated protein 5-9##BC069531|KRTAP5-9|3846|keratin associated protein 5-9##AB126079|KRTAP5-10|387273|keratin associated protein 5-10##BC137550|KRTAP5-10|387273|keratin associated protein 5-10##BC137566|KRTAP5-10|387273|keratin associated protein 5-10##NM_001012710|KRTAP5-10|387273|keratin associated protein 5-10##BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11	0.261128	CTCF.p2:-18:0.261
chr13	24586966	24587105	reg1027131.p1	5.325	+	TSC_hg19_v1_chr13_+_24553943 BX648244 BC043582	-33102	+	BX648445 TSC_hg19_v1_chr13_+_24553892	-33170	+	NM_001007537 CU691876 BC137004 BC137006 BC144450	-115877	-	TSC_hg19_v1_chr13_+_24734858 AK092754 AX747708 NM_001166271 NM_153023 AK055770	147860	+	AK299981 AK301149 TSC_hg19_v1_chr13_+_24825840	238800	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	257863	+	BX648244|SPATA13|221178|spermatogenesis associated 13##NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##AK092754|SPATA13|221178|spermatogenesis associated 13##NM_001166271|SPATA13|221178|spermatogenesis associated 13##NM_153023|SPATA13|221178|spermatogenesis associated 13##AK055770|SPATA13|221178|spermatogenesis associated 13##AK299981|SPATA13|221178|spermatogenesis associated 13##AK301149|SPATA13|221178|spermatogenesis associated 13##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13	0.313182	CTCF.p2:-7:0.313
chr15	40660592	40660658	reg1001210.p2	5.325	+	TSC_hg19_v1_chr15_+_40650431 NM_033510 AB051529 BC151833	-10203	+	TSC_hg19_v1_chr15_+_40643233 NM_001145643 BC061640	-17390	+	TSC_hg19_v1_chr15_-_40633122 AK125329 NM_207380	-27481	-	AK125765 AK301887 NM_001142761 NM_001142762 NM_033286 BC118559 BC118639 AY652615 TSC_hg19_v1_chr15_+_40675159 BC045739 BC107802 U81002 AK027408	14425	+	TSC_hg19_v1_chr15_+_40675188 AK298156 BC004543 BC014060 BC021124 BC064344	14575	+	NM_001159508 NM_002225	37060	+	NM_033510|DISP2|85455|dispatched homolog 2 (Drosophila)##AB051529|DISP2|85455|dispatched homolog 2 (Drosophila)##BC151833|DISP2|85455|dispatched homolog 2 (Drosophila)##NM_001145643|PHGR1|644844|proline/histidine/glycine-rich 1##BC061640|PHGR1|644844|proline/histidine/glycine-rich 1##AK125329|C15orf52|388115|chromosome 15 open reading frame 52##NM_207380|C15orf52|388115|chromosome 15 open reading frame 52##AK125765|C15orf23|90417|chromosome 15 open reading frame 23##AK301887|C15orf23|90417|chromosome 15 open reading frame 23##NM_001142761|C15orf23|90417|chromosome 15 open reading frame 23##NM_001142762|C15orf23|90417|chromosome 15 open reading frame 23##NM_033286|C15orf23|90417|chromosome 15 open reading frame 23##BC118559|C15orf23|90417|chromosome 15 open reading frame 23##BC118639|C15orf23|90417|chromosome 15 open reading frame 23##AY652615|C15orf23|90417|chromosome 15 open reading frame 23##BC045739|C15orf23|90417|chromosome 15 open reading frame 23##BC107802|C15orf23|90417|chromosome 15 open reading frame 23##U81002|C15orf23|90417|chromosome 15 open reading frame 23##AK027408|C15orf23|90417|chromosome 15 open reading frame 23##AK298156|C15orf23|90417|chromosome 15 open reading frame 23##BC004543|C15orf23|90417|chromosome 15 open reading frame 23##BC014060|C15orf23|90417|chromosome 15 open reading frame 23##BC021124|C15orf23|90417|chromosome 15 open reading frame 23##BC064344|C15orf23|90417|chromosome 15 open reading frame 23##NM_001159508|IVD|3712|isovaleryl-CoA dehydrogenase##NM_002225|IVD|3712|isovaleryl-CoA dehydrogenase	0.105059	
chr17	40972105	40972223	reg1026383.p1	5.325	+	BC026187 NM_173478 AK302094 AK097456 CU693154	-21217	+	TSC_hg19_v1_chr17_-_40950712 DQ893448 EU176748 BC002698 NM_001040431 AK295023 AK290863 AF070665 AK225611	-21460	-	TSC_hg19_v1_chr17_+_40932634 NM_032387 AF390018 BC136664 BC144356 AJ316534	-39506	+	TSC_hg19_v1_chr17_-_40976300 AK223411 AK312651 BC010276 AF139131 BX647788 AK298619 AK299616 NM_003766	4135	-	TSC_hg19_v1_chr17_+_40985415 AK314347	13249	+	TSC_hg19_v1_chr17_+_40985422 NM_005789 NM_176863	13255	+	BC026187|CNTD1|124817|cyclin N-terminal domain containing 1##NM_173478|CNTD1|124817|cyclin N-terminal domain containing 1##AK302094|CNTD1|124817|cyclin N-terminal domain containing 1##AK097456|CNTD1|124817|cyclin N-terminal domain containing 1##DQ893448|CCDC56|28958|coiled-coil domain containing 56##EU176748|CCDC56|28958|coiled-coil domain containing 56##BC002698|CCDC56|28958|coiled-coil domain containing 56##NM_001040431|CCDC56|28958|coiled-coil domain containing 56##AK295023|CCDC56|28958|coiled-coil domain containing 56##AK290863|CCDC56|28958|coiled-coil domain containing 56##AF070665|CCDC56|28958|coiled-coil domain containing 56##AK225611|CCDC56|28958|coiled-coil domain containing 56##NM_032387|WNK4|65266|WNK lysine deficient protein kinase 4##AF390018|WNK4|65266|WNK lysine deficient protein kinase 4##BC136664|WNK4|65266|WNK lysine deficient protein kinase 4##BC144356|WNK4|65266|WNK lysine deficient protein kinase 4##AJ316534|WNK4|65266|WNK lysine deficient protein kinase 4##AK223411|BECN1|8678|beclin 1, autophagy related##AK312651|BECN1|8678|beclin 1, autophagy related##BC010276|BECN1|8678|beclin 1, autophagy related##AF139131|BECN1|8678|beclin 1, autophagy related##BX647788|BECN1|8678|beclin 1, autophagy related##AK298619|BECN1|8678|beclin 1, autophagy related##AK299616|BECN1|8678|beclin 1, autophagy related##NM_003766|BECN1|8678|beclin 1, autophagy related##AK314347|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##NM_005789|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)##NM_176863|PSME3|10197|proteasome (prosome, macropain) activator subunit 3 (PA28 gamma; Ki)	0.996922	CTCF.p2:-16:0.997
chr18	64227495	64227631	reg1027830.p1	5.325	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-809361	+	TSC_hg19_v1_chr18_+_63417845 BC036786	-809697	+	AJ007611 NM_033646	-810076	+	AJ007607 NM_021153 AK304000 AK315257 BC015877	43748	-	AK021849 TSC_hg19_v1_chr18_-_65182656	955020	-	TSC_hg19_v1_chr18_-_65183956 NM_032160	956383	-	AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AK021849|DSEL|92126|dermatan sulfate epimerase-like##NM_032160|DSEL|92126|dermatan sulfate epimerase-like	0.991489	CTCF.p2:-24:0.991
chrX	108876243	108876358	reg1025111.p1	5.325	+	DQ891287 DQ894471 DQ896649 DQ896656 DQ896659 DQ896664 EF535525 BC035330 AJ012743 NM_012282 AK223306 AK314923 DQ192294 TSC_hg19_v1_chrX_-_108868398	-7976	-	AF246127 AJ277591 AJ278323 NM_001242618 TSC_hg19_v1_chrX_+_108780470	-95946	+	NM_001242617 TSC_hg19_v1_chrX_+_108780077 AF201942 BC014888 AF212223	-96217	+	TSC_hg19_v1_chrX_-_108976464 Y12777 Y13058 AB061714 BC034959 AK307566 AK294915	100179	-	TSC_hg19_v1_chrX_-_108976528 AB061713 AK292070 AF030555 NM_004458 NM_022977	100264	-	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	369570	+	DQ891287|KCNE1L|23630|KCNE1-like##DQ894471|KCNE1L|23630|KCNE1-like##DQ896649|KCNE1L|23630|KCNE1-like##DQ896656|KCNE1L|23630|KCNE1-like##DQ896659|KCNE1L|23630|KCNE1-like##DQ896664|KCNE1L|23630|KCNE1-like##EF535525|KCNE1L|23630|KCNE1-like##BC035330|KCNE1L|23630|KCNE1-like##AJ012743|KCNE1L|23630|KCNE1-like##NM_012282|KCNE1L|23630|KCNE1-like##AK223306|KCNE1L|23630|KCNE1-like##AK314923|KCNE1L|23630|KCNE1-like##DQ192294|KCNE1L|23630|KCNE1-like##AF246127|NXT2|55916|nuclear transport factor 2-like export factor 2##AJ277591|NXT2|55916|nuclear transport factor 2-like export factor 2##AJ278323|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242618|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2##AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2##BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2##AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2##Y12777|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y13058|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061714|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##BC034959|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK307566|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK294915|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061713|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK292070|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AF030555|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_004458|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_022977|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164	0.98563	CTCF.p2:37:0.986
chr11	61828956	61829074	reg1028300.p1	5.324	+	TSC_hg19_v1_chr11_+_61735277 AK093779 AX748301 BC132894 BC132896	-93681	+	TSC_hg19_v1_chr11_-_61735173 NM_002032	-93868	-	BC020300 BC015946 BC063514 TSC_hg19_v1_chr11_-_61735103 BC011359 BC070494 AB062402 BC013724 BC073750 BC000857 BC035441 AK307190 AK311818 BC016009 BC066341 BC066961 BC104643 BC105802 L20941 D28463	-93928	-	TSC_hg19_v1_chr11_+_61891482 AK307633 BC098576 NM_001040694 NM_020238 AK056195 AK310714 BC032678	62457	+	BC062693 AJ224171 BC069170 BC069289 NM_006552	128683	+	AF071219 NM_002407 BC062218 AJ224173	147136	+	AK093779|LOC399900|399900|uncharacterized LOC399900##BC132894|LOC399900|399900|uncharacterized LOC399900##BC132896|LOC399900|399900|uncharacterized LOC399900##NM_002032|FTH1|2495|ferritin, heavy polypeptide 1##BC020300|FTH1|2495|ferritin, heavy polypeptide 1##BC015946|FTH1|2495|ferritin, heavy polypeptide 1##BC063514|FTH1|2495|ferritin, heavy polypeptide 1##BC011359|FTH1|2495|ferritin, heavy polypeptide 1##BC070494|FTH1|2495|ferritin, heavy polypeptide 1##AB062402|FTH1|2495|ferritin, heavy polypeptide 1##BC013724|FTH1|2495|ferritin, heavy polypeptide 1##BC073750|FTH1|2495|ferritin, heavy polypeptide 1##BC000857|FTH1|2495|ferritin, heavy polypeptide 1##BC035441|FTH1|2495|ferritin, heavy polypeptide 1##AK307190|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK311818|FTH1|2495|ferritin, heavy polypeptide 1##BC016009|FTH1|2495|ferritin, heavy polypeptide 1##BC066341|FTH1|2495|ferritin, heavy polypeptide 1##BC066961|FTH1|2495|ferritin, heavy polypeptide 1##BC104643|FTH1|2495|ferritin, heavy polypeptide 1##BC105802|FTH1|2495|ferritin, heavy polypeptide 1##L20941|FTH1|2495|ferritin, heavy polypeptide 1##D28463|FTH1|2495|ferritin, heavy polypeptide 1##AK307633|INCENP|3619|inner centromere protein antigens 135/155kDa##BC098576|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_001040694|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_020238|INCENP|3619|inner centromere protein antigens 135/155kDa##AK056195|INCENP|3619|inner centromere protein antigens 135/155kDa##AK310714|INCENP|3619|inner centromere protein antigens 135/155kDa##BC032678|INCENP|3619|inner centromere protein antigens 135/155kDa##BC062693|SCGB1D1|10648|secretoglobin, family 1D, member 1##AJ224171|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069170|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069289|SCGB1D1|10648|secretoglobin, family 1D, member 1##NM_006552|SCGB1D1|10648|secretoglobin, family 1D, member 1##AF071219|SCGB2A1|4246|secretoglobin, family 2A, member 1##NM_002407|SCGB2A1|4246|secretoglobin, family 2A, member 1##BC062218|SCGB2A1|4246|secretoglobin, family 2A, member 1##AJ224173|SCGB2A1|4246|secretoglobin, family 2A, member 1	0.0	
chr8	142153879	142154060	reg1022260.p1	5.324	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-15232	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-142713	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-508345	-	AK128212 NM_001080431	84703	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	110221	-	NM_005293	223395	-	NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.0	
chr1	172363343	172363523	reg1026710.p2	5.323	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-552730	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-612595	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-612619	+	AL035295 NM_139240 BC038410	26395	+	TSC_hg19_v1_chr1_-_172413202 BC006539	49755	-	TSC_hg19_v1_chr1_-_172413207 AK308201	49774	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.0	
chr11	131278060	131278174	reg1028137.p1	5.322	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-37648	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-491729	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-491772	-	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	502507	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	503222	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	1534897	-	NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.208706	CTCF.p2:-2:0.209
chr1	160519221	160519396	reg1027440.p1	5.322	+	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	-26279	-	NM_020335 TSC_hg19_v1_chr1_+_160370394	-148929	+	M96739 AK313700 NM_005598 BC013789	-182444	+	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	29939	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	29980	-	AK314244 NM_003037 BC012602	97755	-	AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1	0.0	
chr13	28975792	28975944	reg1025229.p1	5.322	+	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	-263202	+	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	-301181	-	NM_001105577	-413095	-	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	93376	-	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	257340	+	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	257426	+	AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##NM_001105577|PRHOXNB|646625|parahox cluster neighbor##BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein	0.022919	
chr14	50087527	50087631	reg1026937.p2	5.322	+	TSC_hg19_v1_chr14_-_50087339 BC003145 BC000741 BC070207 AK311959 AB063609 NM_001001 BC107716	-235	-	NM_152329 NM_203467 TSC_hg19_v1_chr14_+_50065473 BC030142 BX648029	-22119	+	BC032813 BC035313 L31610 U14973 AK026649 BC015974 NM_001030001 NM_001032 AB055780 AK307833 TSC_hg19_v1_chr14_-_50053095	-34486	-	TSC_hg19_v1_chr14_+_50087493 NM_002408 BC006390 BC018912 AK075199 AK056167 AK293231 DQ892713 DQ896859	128	+	BC013322 TSC_hg19_v1_chr14_-_50100693 BX248264 BC011400 AK001425	13117	-	FJ158843 TSC_hg19_v1_chr14_-_50101912	14313	-	BC003145|RPL36AL|6166|ribosomal protein L36a-like##BC000741|RPL36AL|6166|ribosomal protein L36a-like##BC070207|RPL36AL|6166|ribosomal protein L36a-like##AK311959|RPL36AL|6166|ribosomal protein L36a-like##AB063609|RPL36AL|6166|ribosomal protein L36a-like##NM_001001|RPL36AL|6166|ribosomal protein L36a-like##BC107716|RPL36AL|6166|ribosomal protein L36a-like##NM_152329|LRR1|122769|leucine rich repeat protein 1##NM_203467|LRR1|122769|leucine rich repeat protein 1##BC030142|LRR1|122769|leucine rich repeat protein 1##BX648029|LRR1|122769|leucine rich repeat protein 1##BC032813|RPS29|6235|ribosomal protein S29##BC035313|RPS29|6235|ribosomal protein S29##L31610|RPS29|6235|ribosomal protein S29##U14973|RPS29|6235|ribosomal protein S29##AK026649|RPS29|6235|ribosomal protein S29##BC015974|RPS29|6235|ribosomal protein S29##NM_001030001|RPS29|6235|ribosomal protein S29##NM_001032|RPS29|6235|ribosomal protein S29##AB055780|RPS29|6235|ribosomal protein S29##NM_002408|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##BC006390|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##BC018912|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK075199|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK056167|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK293231|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##DQ892713|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##DQ896859|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##BC013322|DNAAF2|55172|dynein, axonemal, assembly factor 2##BX248264|DNAAF2|55172|dynein, axonemal, assembly factor 2##BC011400|DNAAF2|55172|dynein, axonemal, assembly factor 2##AK001425|DNAAF2|55172|dynein, axonemal, assembly factor 2##FJ158843|DNAAF2|55172|dynein, axonemal, assembly factor 2	0.0	
chr6	130544798	130544889	reg1028692.p1	5.322	+	AK091882 AX747235 NM_001017373	-745	-	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	-8388	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	-205118	+	AB052099 NM_052913	213418	+	BC113027 NM_001195597 AK091900 AX747243 BC101422 BC101423 BC101424 BC101425 BC113026 TSC_hg19_v1_chr6_+_131148577	603719	+	TSC_hg19_v1_chr6_-_131291480 AK307764 NM_001199389	746708	-	AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A##BC113027|LOC100507203|100507203|uncharacterized LOC100507203##NM_001195597|LOC100507203|100507203|uncharacterized LOC100507203##AK091900|LOC100507203|100507203|uncharacterized LOC100507203##BC101422|LOC100507203|100507203|uncharacterized LOC100507203##BC101423|LOC100507203|100507203|uncharacterized LOC100507203##BC101424|LOC100507203|100507203|uncharacterized LOC100507203##BC101425|LOC100507203|100507203|uncharacterized LOC100507203##BC113026|LOC100507203|100507203|uncharacterized LOC100507203##AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	0.0	
chr7	155317145	155317233	reg1027141.p2	5.322	+	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	-66425	+	AK291675 TSC_hg19_v1_chr7_+_155089667	-227545	+	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	-227667	+	BC105732 BC105733 BC105734 BC107598 NM_001103176 AK094445	9358	-	TSC_hg19_v1_chr7_-_155437101 AK091942 AX747269	119901	-	TSC_hg19_v1_chr7_+_155437147 BC011923	119962	+	BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2##AK291675|INSIG1|3638|insulin induced gene 1##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)##BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)##NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)##AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)##BC011923|RBM33|155435|RNA binding motif protein 33	0.881337	CTCF.p2:-11:0.881
chr9	102985078	102985220	reg1027487.p2	5.322	+	TSC_hg19_v1_chr9_+_102861574 BC006370 BC111761 BC112351	-123528	+	AF039217 TSC_hg19_v1_chr9_+_102861540 BC063847 AK304851 BC072429 BC110864	-123609	+	TSC_hg19_v1_chr9_+_102861524 BC041665 NM_014425 NM_183245 AK312795	-123668	+	AK302619 NM_001161584	129703	-	BC030652 TSC_hg19_v1_chr9_-_103115211 AK304869 AK000294 AB060968 AK303662 AK298916 NM_017746	130036	-	BC042955 TSC_hg19_v1_chr9_+_103115352 AK056351	130211	+	BC006370|INVS|27130|inversin##BC111761|INVS|27130|inversin##BC112351|INVS|27130|inversin##AF039217|INVS|27130|inversin##BC063847|INVS|27130|inversin##AK304851|INVS|27130|inversin##BC072429|INVS|27130|inversin##BC041665|INVS|27130|inversin##NM_014425|INVS|27130|inversin##NM_183245|INVS|27130|inversin##AK312795|INVS|27130|inversin##AK302619|TEX10|54881|testis expressed 10##NM_001161584|TEX10|54881|testis expressed 10##BC030652|TEX10|54881|testis expressed 10##AK304869|TEX10|54881|testis expressed 10##AK000294|TEX10|54881|testis expressed 10##AB060968|TEX10|54881|testis expressed 10##AK303662|TEX10|54881|testis expressed 10##AK298916|TEX10|54881|testis expressed 10##NM_017746|TEX10|54881|testis expressed 10	0.98197	CTCF.p2:12:0.982
chr10	74033674	74033784	reg1020402.p4	5.321	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-57618	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-57941	+	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	-57965	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	95	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	80949	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	81197	-	AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	0.0	
chr1	55944518	55944673	reg1026954.p1	5.321	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-263511	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-263559	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-439371	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	1100424	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	1100535	-	AK312439 TSC_hg19_v1_chr1_-_57045216	1100622	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.880246	CTCF.p2:0:0.880
chr15	66274725	66274867	reg1024185.p1	5.321	+	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	-112949	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-190203	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	-190323	-	TSC_hg19_v1_chr15_-_66321664 AK054827	46897	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	271281	-	NM_133375 AK295392 BC022089	310849	+	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	0.0	
chr20	2668771	2668873	reg1022370.p1	5.321	+	TSC_hg19_v1_chr20_-_2644844 BC019037 CU674954 DQ892561 DQ895776 DQ895816 EU831924 EU832019 AK001905 BC001960 NM_006899 NM_174855 NM_174856 AK309488 AK315641 AK300485	-23988	-	AL050094 TSC_hg19_v1_chr20_-_2641583	-27286	-	BC104791 BC104793 NM_006392 TSC_hg19_v1_chr20_+_2633277 AK292721 BX647439 BC035369	-35571	+	TSC_hg19_v1_chr20_+_2673520 AB037863 NM_001110514	4860	+	AK027661 BC032692 AY358956 TSC_hg19_v1_chr20_-_2781253	112421	-	AK075527 BC063430 AK075508 TSC_hg19_v1_chr20_-_2781274 AK315027 NM_001184699 NM_019609	112461	-	BC019037|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ892561|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ895776|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ895816|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##EU831924|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##EU832019|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK001905|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##BC001960|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_006899|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_174855|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_174856|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK309488|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK315641|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK300485|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##BC104791|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##BC104793|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##NM_006392|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##AK292721|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##BX647439|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##BC035369|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##AB037863|EBF4|57593|early B-cell factor 4##NM_001110514|EBF4|57593|early B-cell factor 4##AK027661|CPXM1|56265|carboxypeptidase X (M14 family), member 1##BC032692|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AY358956|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK075527|CPXM1|56265|carboxypeptidase X (M14 family), member 1##BC063430|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK075508|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK315027|CPXM1|56265|carboxypeptidase X (M14 family), member 1##NM_001184699|CPXM1|56265|carboxypeptidase X (M14 family), member 1##NM_019609|CPXM1|56265|carboxypeptidase X (M14 family), member 1	0.92402	CTCF.p2:-11:0.924
chr2	231627161	231627296	reg1030560.p1	5.321	+	AK292382 NM_001130849 NM_001130850 AK315692	-48950	+	TSC_hg19_v1_chr2_+_231577633 BC020570	-49584	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	-49682	+	TSC_hg19_v1_chr2_+_231729608 NM_001012514 NM_001012516 NM_030926	102332	+	TSC_hg19_v1_chr2_+_231729626 AF271781 AF272043	102401	+	TSC_hg19_v1_chr2_+_231729653 AK075361 AK090975 AK303199 AX746713	102417	+	AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##NM_016289|CAB39|51719|calcium binding protein 39##NM_001012514|ITM2C|81618|integral membrane protein 2C##NM_001012516|ITM2C|81618|integral membrane protein 2C##NM_030926|ITM2C|81618|integral membrane protein 2C##AF271781|ITM2C|81618|integral membrane protein 2C##AF272043|ITM2C|81618|integral membrane protein 2C##AK075361|ITM2C|81618|integral membrane protein 2C##AK090975|ITM2C|81618|integral membrane protein 2C##AK303199|ITM2C|81618|integral membrane protein 2C	0.939887	CTCF.p2:7:0.551	CTCF.p2:-44:0.389
chr11	34127033	34127203	reg1023120.p1	5.320	+	TSC_hg19_v1_chr11_+_34073956 EU176359 EU176467 EU176701	-53081	+	TSC_hg19_v1_chr11_+_34073950 Z48042	-53181	+	TSC_hg19_v1_chr11_+_34073889 AK299720	-53214	+	NM_001144030 NM_024662 TSC_hg19_v1_chr11_+_34127175 AK022241 AK225341 BC035558 AB051496	39	+	TSC_hg19_v1_chr11_+_34127208 AK294044 AL136882 AK001636 BC014440 BC020205	132	+	TSC_hg19_v1_chr11_-_34379556 AK291744 NM_145804	252437	-	EU176359|CAPRIN1|4076|cell cycle associated protein 1##EU176467|CAPRIN1|4076|cell cycle associated protein 1##EU176701|CAPRIN1|4076|cell cycle associated protein 1##Z48042|CAPRIN1|4076|cell cycle associated protein 1##AK299720|CAPRIN1|4076|cell cycle associated protein 1##NM_001144030|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_024662|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK022241|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK225341|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC035558|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AB051496|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK294044|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AL136882|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK001636|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC014440|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC020205|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2	0.0	
chr17	71253529	71253668	reg1025802.p2	5.320	+	BC005005 TSC_hg19_v1_chr17_+_71229423	-24208	+	TSC_hg19_v1_chr17_+_71228800 AY163812 NM_001100621 NM_001100622 NM_017941 AL136740 AK000728	-24792	+	TSC_hg19_v1_chr17_+_71228596 AK292838	-25004	+	BC157870 NM_001129885	4420	-	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	54542	-	NM_001144952	386628	-	BC005005|C17orf80|55028|chromosome 17 open reading frame 80##AY163812|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100621|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100622|C17orf80|55028|chromosome 17 open reading frame 80##NM_017941|C17orf80|55028|chromosome 17 open reading frame 80##AL136740|C17orf80|55028|chromosome 17 open reading frame 80##AK000728|C17orf80|55028|chromosome 17 open reading frame 80##AK292838|C17orf80|55028|chromosome 17 open reading frame 80##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2	0.0	
chrX	7909832	7909957	reg1025307.p2	5.320	+	AK304586 TSC_hg19_v1_chrX_-_7895766 NM_001142389 NM_001172672	-14123	-	AK289888 U03886 NM_004650 BC020746	-14444	-	AF167081 NM_013452	-99592	+	AF167079 NM_016378	229413	-	AF167078 AF167080 NM_001001888	522976	+	X60299 TSC_hg19_v1_chrX_-_8700155	790249	-	AK304586|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001142389|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001172672|PNPLA4|8228|patatin-like phospholipase domain containing 4##AK289888|PNPLA4|8228|patatin-like phospholipase domain containing 4##U03886|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_004650|PNPLA4|8228|patatin-like phospholipase domain containing 4##BC020746|PNPLA4|8228|patatin-like phospholipase domain containing 4##AF167081|VCX|26609|variable charge, X-linked##NM_013452|VCX|26609|variable charge, X-linked##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016378|VCX2|51480|variable charge, X-linked 2##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167080|VCX3B|425054|variable charge, X-linked 3B##NM_001001888|VCX3B|425054|variable charge, X-linked 3B##X60299|KAL1|3730|Kallmann syndrome 1 sequence	0.994933	CTCF.p2:-6:0.995
chr10	3944671	3944822	reg1025249.p2	5.319	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-117237	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-117435	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-729741	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	923672	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1060768	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1060877	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr15	30422361	30422493	reg1024759.p1	5.319	+	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-307804	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-308085	-	NM_015307	-559501	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	263285	-	TSC_hg19_v1_chr15_+_30918372 BC071990	495959	+	BC105788 NM_001039841	496451	+	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B	0.369177	CTCF.p2:-26:0.369
chr2	158890892	158891018	reg1027431.p2	5.319	+	BC033529 NM_001135098	-39265	+	AK297765 AK313630 NM_001111067	-158598	-	BC033867 BC036748 NM_001105	-159333	-	AK122743 NM_173355	67426	+	CU677295 BC105928 BC107596 BC107597 AK123220 AK058105 AF458588 BC015395 AK309246 TSC_hg19_v1_chr2_-_159313250 AK308783 AK311042 NM_001171637 NM_138803	422154	-	TSC_hg19_v1_chr2_+_159313419 BC034473	422480	+	BC033529|UPP2|151531|uridine phosphorylase 2##NM_001135098|UPP2|151531|uridine phosphorylase 2##AK297765|ACVR1|90|activin A receptor, type I##AK313630|ACVR1|90|activin A receptor, type I##NM_001111067|ACVR1|90|activin A receptor, type I##BC033867|ACVR1|90|activin A receptor, type I##BC036748|ACVR1|90|activin A receptor, type I##NM_001105|ACVR1|90|activin A receptor, type I##AK122743|UPP2|151531|uridine phosphorylase 2##NM_173355|UPP2|151531|uridine phosphorylase 2##BC105928|CCDC148|130940|coiled-coil domain containing 148##BC107596|CCDC148|130940|coiled-coil domain containing 148##BC107597|CCDC148|130940|coiled-coil domain containing 148##AK123220|CCDC148|130940|coiled-coil domain containing 148##AK058105|CCDC148|130940|coiled-coil domain containing 148##AF458588|CCDC148|130940|coiled-coil domain containing 148##BC015395|CCDC148|130940|coiled-coil domain containing 148##AK309246|CCDC148|130940|coiled-coil domain containing 148##AK308783|CCDC148|130940|coiled-coil domain containing 148##AK311042|CCDC148|130940|coiled-coil domain containing 148##NM_001171637|CCDC148|130940|coiled-coil domain containing 148##NM_138803|CCDC148|130940|coiled-coil domain containing 148##BC034473|PKP4|8502|plakophilin 4	0.980087	CTCF.p2:-6:0.980
chr3	106837174	106837281	reg1026479.p2	5.319	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-1249420	-	CR749655 TSC_hg19_v1_chr3_-_105421064	-1416173	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-1751405	+	TSC_hg19_v1_chr3_-_106959482 BC036229	122252	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	122365	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	259083	+	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54	0.946293	CTCF.p2:18:0.946
chr5	153764212	153764389	reg1022773.p2	5.319	+	TSC_hg19_v1_chr5_+_153570292 BC050333 NM_198321 AK127135 AB078145 AB527381 AJ505950 AK074132	-193942	+	TSC_hg19_v1_chr5_+_153418558 AK315573 BC026244	-345740	+	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	-345776	+	TSC_hg19_v1_chr5_-_153825380 BC042059 AK095428	61067	-	TSC_hg19_v1_chr5_+_153825535 AK021588 NM_001131062 NM_001131063 NM_024632	61219	+	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	61310	+	BC050333|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##NM_198321|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK127135|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AB078145|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AJ505950|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK074132|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK315573|MFAP3|4238|microfibrillar-associated protein 3##BC026244|MFAP3|4238|microfibrillar-associated protein 3##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3##BC042059|FLJ38109|386627|uncharacterized LOC386627##AK095428|FLJ38109|386627|uncharacterized LOC386627##AK021588|SAP30L|79685|SAP30-like##NM_001131062|SAP30L|79685|SAP30-like##NM_001131063|SAP30L|79685|SAP30-like##NM_024632|SAP30L|79685|SAP30-like##AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like	0.0	
chr10	12591429	12591545	reg1026192.p1	5.318	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-199710	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-199770	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	-199912	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	452212	-	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	550658	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	612081	+	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10	0.372169	CTCF.p2:-9:0.372
chr12	776017	776198	reg1022553.p1	5.318	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-3392	-	TSC_hg19_v1_chr12_-_752800 AK298043	-23288	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-23929	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	86049	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	86649	+	BC013629 TSC_hg19_v1_chr12_+_1017145	240975	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr17	41843913	41844025	reg1024748.p2	5.318	+	BC101086 BC101087 BC101088 BC101089 AF331844 AF326739 NM_025237	-7826	-	NM_001040002 AK291139	-104694	-	AB527749 CU686836 EU446636 BC069474 BC069506 NM_004527 NM_013999 U10492 U10493	-105054	-	AK226170 TSC_hg19_v1_chr17_-_41856314 AB451424 BT019522 CU678116 DQ893122 DQ896399 BC035701 AK129822 L05147 BC002682 NM_004090	12315	-	BC054872 BC070324 NM_001136483 BC146971 AK125817	13845	+	BC056865 TSC_hg19_v1_chr17_-_41910234	66242	-	BC101086|SOST|50964|sclerostin##BC101087|SOST|50964|sclerostin##BC101088|SOST|50964|sclerostin##BC101089|SOST|50964|sclerostin##AF331844|SOST|50964|sclerostin##AF326739|SOST|50964|sclerostin##NM_025237|SOST|50964|sclerostin##NM_001040002|MEOX1|4222|mesenchyme homeobox 1##AK291139|MEOX1|4222|mesenchyme homeobox 1##EU446636|MEOX1|4222|mesenchyme homeobox 1##BC069474|MEOX1|4222|mesenchyme homeobox 1##BC069506|MEOX1|4222|mesenchyme homeobox 1##NM_004527|MEOX1|4222|mesenchyme homeobox 1##NM_013999|MEOX1|4222|mesenchyme homeobox 1##U10492|MEOX1|4222|mesenchyme homeobox 1##U10493|MEOX1|4222|mesenchyme homeobox 1##AK226170|DUSP3|1845|dual specificity phosphatase 3##AB451424|DUSP3|1845|dual specificity phosphatase 3##BT019522|DUSP3|1845|dual specificity phosphatase 3##DQ893122|DUSP3|1845|dual specificity phosphatase 3##DQ896399|DUSP3|1845|dual specificity phosphatase 3##BC035701|DUSP3|1845|dual specificity phosphatase 3##AK129822|DUSP3|1845|dual specificity phosphatase 3##L05147|DUSP3|1845|dual specificity phosphatase 3##BC002682|DUSP3|1845|dual specificity phosphatase 3##NM_004090|DUSP3|1845|dual specificity phosphatase 3##BC054872|C17orf105|284067|chromosome 17 open reading frame 105##BC070324|C17orf105|284067|chromosome 17 open reading frame 105##NM_001136483|C17orf105|284067|chromosome 17 open reading frame 105##BC146971|C17orf105|284067|chromosome 17 open reading frame 105##AK125817|C17orf105|284067|chromosome 17 open reading frame 105##BC056865|MPP3|4356|membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)	0.968411	CTCF.p2:4:0.968
chr2	238074169	238074292	reg1025132.p1	5.318	+	TSC_hg19_v1_chr2_+_237994551 AK289891 BC067774 AK308962 U51205 BC003090 BC080617 CR456994 CU678366	-79653	+	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	-79710	+	TSC_hg19_v1_chr2_-_237994424 AK056246	-79793	-	TSC_hg19_v1_chr2_-_238322786 AK092021 AX747317 AK304870 BC144595 BC150625 BC171790	248555	-	AK308451 TSC_hg19_v1_chr2_-_238322808 BX647500	248579	-	AK303290 TSC_hg19_v1_chr2_-_238322814	248584	-	AK289891|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK308962|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##U51205|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC003090|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC080617|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##CR456994|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK092021|COL6A3|1293|collagen, type VI, alpha 3##AK304870|COL6A3|1293|collagen, type VI, alpha 3##BC144595|COL6A3|1293|collagen, type VI, alpha 3##BC150625|COL6A3|1293|collagen, type VI, alpha 3##BC171790|COL6A3|1293|collagen, type VI, alpha 3##AK308451|COL6A3|1293|collagen, type VI, alpha 3##BX647500|COL6A3|1293|collagen, type VI, alpha 3##AK303290|COL6A3|1293|collagen, type VI, alpha 3	0.91719	CTCF.p2:-30:0.917
chr4	113435716	113435804	reg1027365.p1	5.318	+	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	-217233	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	-228759	-	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	-282676	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	1572	-	TSC_hg19_v1_chr4_-_113558057 BC044799 BC028584 AK002193	122286	-	NM_016648	122359	+	NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2##BC044799|C4orf21|55345|chromosome 4 open reading frame 21##BC028584|C4orf21|55345|chromosome 4 open reading frame 21##AK002193|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7	0.0	
chr6	137416888	137417045	reg1024081.p1	5.318	+	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	-50721	-	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	-51128	-	AK316095 BC087842 NM_001008783 AK295424	-173513	+	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	77785	-	TSC_hg19_v1_chr6_-_137540496 BT006814 AB527981 CU675119 AF056979 AK294252	123502	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	123546	-	AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2##BT006814|IFNGR1|3459|interferon gamma receptor 1##AF056979|IFNGR1|3459|interferon gamma receptor 1##AK294252|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1	0.0	
chr1	154721674	154721779	reg1027808.p2	5.317	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-121261	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-121312	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-141026	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	110536	-	BX649146 TSC_hg19_v1_chr1_-_154840541	118775	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	121020	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.930791	CTCF.p2:0:0.931
chr12	27577660	27577779	reg1027582.p2	5.317	+	TSC_hg19_v1_chr12_+_27485806 AF256215 NM_001248002 NM_001248003 NM_001248004 NM_001248005 NM_020183 AK296706 AF246960 AF246961 AF246962 AF246963 BC125062 BC125061	-91840	+	TSC_hg19_v1_chr12_+_27397225 AK304755	-180494	+	TSC_hg19_v1_chr12_+_27397187 AK291055	-180532	+	BC043511 TSC_hg19_v1_chr12_-_27599649	21885	-	NM_001145010	42023	+	NM_001198915 NM_001198916 NM_003622 NM_177444 TSC_hg19_v1_chr12_+_27677138 BC022873 BC001560 AK294267 AB033056 BC050281 AB049149 AK314350 AF034802 BC046159	99416	+	AF256215|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248002|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248003|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248004|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248005|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_020183|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AK296706|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246960|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246961|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246962|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246963|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##BC125062|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##BC125061|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AK304755|STK38L|23012|serine/threonine kinase 38 like##AK291055|STK38L|23012|serine/threonine kinase 38 like##BC043511|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001145010|C12orf70|341346|chromosome 12 open reading frame 70##NM_001198915|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_001198916|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_003622|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_177444|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC022873|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC001560|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK294267|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB033056|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC050281|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB049149|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK314350|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AF034802|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC046159|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)	0.794119	CTCF.p2:18:0.794
chr13	23893903	23894032	reg1026372.p2	5.317	+	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	-138852	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-1648819	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-1715607	-	TSC_hg19_v1_chr13_-_23949652 AK125458	55683	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	113873	-	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	250488	+	NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19	0.999219	CTCF.p2:-1:0.999
chr3	142926213	142926394	reg1026567.p2	5.317	+	BC067737 TSC_hg19_v1_chr3_+_142895211	-31132	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-87652	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-205873	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	640964	-	NM_173552 AK315082	764349	+	TSC_hg19_v1_chr3_+_143690915 BC037293	764687	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58	0.0	
chr3	53565890	53566053	reg1024761.p1	5.317	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	-36860	+	TSC_hg19_v1_chr3_+_53528709 M76558	-37312	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	-184378	-	TSC_hg19_v1_chr3_-_53880427 NM_018397	314448	-	TSC_hg19_v1_chr3_+_53880576 NM_018725	314601	+	TSC_hg19_v1_chr3_+_53880594 AK307749	314624	+	NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018397|CHDH|55349|choline dehydrogenase##NM_018725|IL17RB|55540|interleukin 17 receptor B##AK307749|IL17RB|55540|interleukin 17 receptor B	0.948835	CTCF.p2:-18:0.949
chr4	10159643	10159729	reg1005113.p2	5.317	+	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-41150	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-41208	-	AK222764 AK225276 TSC_hg19_v1_chr4_-_10118453	-41236	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	299324	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	526715	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	1270846	-	NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##AK222764|WDR1|9948|WD repeat domain 1##AK225276|WDR1|9948|WD repeat domain 1##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1	0.0	
chr5	138893492	138893672	reg1000182.p2	5.317	+	NM_198282 TSC_hg19_v1_chr5_-_138862344	-31239	-	TSC_hg19_v1_chr5_-_138862306 AK095896 AX775913 BC047779 AK290661	-31310	-	AK304726 BC146912 BC146913 DQ462572 NM_001077693 EU025066 TSC_hg19_v1_chr5_-_138842329	-51272	-	TSC_hg19_v1_chr5_+_138940760 BC033349 NM_003339 NM_181838 BC048426	47191	+	TSC_hg19_v1_chr5_+_138940966 AK001428 BC019052 AK001311 AY651263	47343	+	TSC_hg19_v1_chr5_+_138941350 U39317 AB590980	47766	+	NM_198282|TMEM173|340061|transmembrane protein 173##AK095896|TMEM173|340061|transmembrane protein 173##AX775913|TMEM173|340061|transmembrane protein 173##BC047779|TMEM173|340061|transmembrane protein 173##AK290661|TMEM173|340061|transmembrane protein 173##BC146912|ECSCR|641700|endothelial cell-specific chemotaxis regulator##BC146913|ECSCR|641700|endothelial cell-specific chemotaxis regulator##DQ462572|ECSCR|641700|endothelial cell-specific chemotaxis regulator##NM_001077693|ECSCR|641700|endothelial cell-specific chemotaxis regulator##EU025066|ECSCR|641700|endothelial cell-specific chemotaxis regulator##BC033349|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_003339|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_181838|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC048426|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001428|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC019052|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001311|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AY651263|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##U39317|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2	0.0	
chr5	59837128	59837288	reg1018072.p1	5.317	+	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	-53168	+	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	-53304	-	NM_001104631	-647588	-	TSC_hg19_v1_chr5_-_59995928 AF490257	158708	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	158757	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	302863	-	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF490257|DEPDC1B|55789|DEP domain containing 1B##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7	0.022748	
chr16	82637528	82637626	reg1024883.p1	5.316	+	CU689076 AB463897 TSC_hg19_v1_chr16_-_82203821 BC005242 BC031017 BC011020 BC029395 X98263 AK222667 AK314163 NM_005792	-433767	-	TSC_hg19_v1_chr16_+_82068989 DQ893100 DQ896372	-568584	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	-568645	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	22817	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	23012	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	23092	+	BC005242|MPHOSPH6|10200|M-phase phosphoprotein 6##BC031017|MPHOSPH6|10200|M-phase phosphoprotein 6##BC011020|MPHOSPH6|10200|M-phase phosphoprotein 6##BC029395|MPHOSPH6|10200|M-phase phosphoprotein 6##X98263|MPHOSPH6|10200|M-phase phosphoprotein 6##AK222667|MPHOSPH6|10200|M-phase phosphoprotein 6##AK314163|MPHOSPH6|10200|M-phase phosphoprotein 6##NM_005792|MPHOSPH6|10200|M-phase phosphoprotein 6##DQ893100|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##DQ896372|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)	0.732206	CTCF.p2:9:0.732
chr3	127409855	127409952	reg1025713.p1	5.316	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-18086	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-61871	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-92619	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	131527	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	132239	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	224415	+	NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.817151	CTCF.p2:-11:0.817
chr1	105570630	105570805	reg1007518.p1	5.315	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-1278215	+	NM_001008221 AK292341	-1278439	+	AK292341 NM_001008221	-1331646	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	2028648	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	2112025	+	AB023193 TSC_hg19_v1_chr1_+_107683657	2112887	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.0	
chr15	45814687	45814841	reg1028820.p1	5.315	+	NM_032413 NM_197955 TSC_hg19_v1_chr15_+_45722808 AF228422 AK026298 BC021173 AB026707	-91967	+	NM_024063 TSC_hg19_v1_chr15_+_45694551 AK291457 AK023232 AK225463 BC051861 BC000981 AK022348	-120212	+	TSC_hg19_v1_chr15_-_45670958 NM_001482	-143797	-	BC026089 NM_013309 TSC_hg19_v1_chr15_-_45815017	246	-	AF080470 NM_012388 TSC_hg19_v1_chr15_+_45879539 AK091740	64722	+	TSC_hg19_v1_chr15_+_45879576 AK057545 BC004819 AK315581 AB527698	64843	+	NM_032413|C15orf48|84419|chromosome 15 open reading frame 48##NM_197955|C15orf48|84419|chromosome 15 open reading frame 48##AF228422|C15orf48|84419|chromosome 15 open reading frame 48##AK026298|C15orf48|84419|chromosome 15 open reading frame 48##BC021173|C15orf48|84419|chromosome 15 open reading frame 48##AB026707|C15orf48|84419|chromosome 15 open reading frame 48##NM_024063|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK291457|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK023232|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK225463|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC051861|SPATA5L1|79029|spermatogenesis associated 5-like 1##BC000981|SPATA5L1|79029|spermatogenesis associated 5-like 1##AK022348|SPATA5L1|79029|spermatogenesis associated 5-like 1##NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC026089|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##NM_013309|SLC30A4|7782|solute carrier family 30 (zinc transporter), member 4##AF080470|PLDN|26258|pallidin homolog (mouse)##NM_012388|PLDN|26258|pallidin homolog (mouse)##AK057545|PLDN|26258|pallidin homolog (mouse)##BC004819|PLDN|26258|pallidin homolog (mouse)##AK315581|PLDN|26258|pallidin homolog (mouse)	0.659386	CTCF.p2:16:0.659
chr2	20800662	20800828	reg1025932.p1	5.315	+	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-153913	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-250326	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-273612	-	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	50103	-	AF522369 NM_182828	65678	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	222108	-	AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43	1.104106	CTCF.p2:-32:0.975
chr2	25449441	25449618	reg1027017.p1	5.315	+	NM_000939 NM_001035256	-57971	-	TSC_hg19_v1_chr2_+_25264954 NM_014971 AB023170	-184552	+	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	-254662	-	TSC_hg19_v1_chr2_-_25466801 BC018214	17279	-	TSC_hg19_v1_chr2_-_25467080 BC023612	17606	-	TSC_hg19_v1_chr2_-_25468920 AK025230	19449	-	NM_000939|POMC|5443|proopiomelanocortin##NM_001035256|POMC|5443|proopiomelanocortin##NM_014971|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AB023170|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC018214|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.0	
chr3	127413374	127413492	reg1024947.p1	5.315	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-21616	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-65401	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-96149	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	127997	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	128709	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	220885	+	NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.986642	CTCF.p2:-14:0.987
chr11	68723763	68723869	reg1024988.p1	5.313	+	TSC_hg19_v1_chr11_+_68671384 AB208802 BC105088 BC105090 BC015666 BC062312 BC000290	-52414	+	TSC_hg19_v1_chr11_+_68671358 AK312565 L14754 BC025299 BC052278 BC080519	-52451	+	TSC_hg19_v1_chr11_+_68671350 BC041808	-52481	+	AB154410 AB463856 AY427820 NM_198923	24638	-	BC016964 AK098317 TSC_hg19_v1_chr11_-_68780715 AK293469 AK075492 AK122669 AK131068 AK075450 NM_001098515 NM_145015	56942	-	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	92534	+	AB208802|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC105088|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC105090|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC015666|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC062312|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC000290|IGHMBP2|3508|immunoglobulin mu binding protein 2##AK312565|IGHMBP2|3508|immunoglobulin mu binding protein 2##L14754|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC025299|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC052278|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC080519|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC041808|IGHMBP2|3508|immunoglobulin mu binding protein 2##AB154410|MRGPRD|116512|MAS-related GPR, member D##AY427820|MRGPRD|116512|MAS-related GPR, member D##NM_198923|MRGPRD|116512|MAS-related GPR, member D##BC016964|MRGPRF|116535|MAS-related GPR, member F##AK098317|MRGPRF|116535|MAS-related GPR, member F##AK293469|MRGPRF|116535|MAS-related GPR, member F##AK075492|MRGPRF|116535|MAS-related GPR, member F##AK122669|MRGPRF|116535|MAS-related GPR, member F##AK131068|MRGPRF|116535|MAS-related GPR, member F##AK075450|MRGPRF|116535|MAS-related GPR, member F##NM_001098515|MRGPRF|116535|MAS-related GPR, member F##NM_145015|MRGPRF|116535|MAS-related GPR, member F##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2	0.137167	
chr6	24283557	24283694	reg1018882.p2	5.313	+	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	-157195	+	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	-1713900	+	X54394 X54393 GQ305133 M58594 NM_001163558	-1980578	-	AF181722 NM_181337	73505	+	AF181721 NM_016356	74654	-	BC050704 NM_001195610	99894	-	AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1##AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2##BC050704|DCDC2|51473|doublecortin domain containing 2##NM_001195610|DCDC2|51473|doublecortin domain containing 2	0.043366	
chr19	43045910	43046050	reg1028038.p2	5.312	+	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	-13388	-	X16356 TSC_hg19_v1_chr19_-_43031473	-14571	-	BC093946 BC112095 AK292985 AY358433 NM_198477 AY598464	-98856	-	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	53050	-	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	198621	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	223844	-	M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17##BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17##NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17##DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8	0.975502	CTCF.p2:16:0.976
chr20	16373101	16373281	reg1026830.p2	5.312	+	BC018687 NM_001033087	-1195688	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-2054935	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-2396855	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	180822	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	337472	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	355830	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	0.0	
chr3	192530675	192530817	reg1026851.p1	5.312	+	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	-85381	-	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-403903	-	AY858112 NM_001083308	-1351795	+	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	104890	-	BC036194 BC045582 NM_178496	105195	-	TSC_hg19_v1_chr3_+_192958897 BC048095 NM_020386	428158	+	AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2##BC048095|HRASLS|57110|HRAS-like suppressor##NM_020386|HRASLS|57110|HRAS-like suppressor	0.826486	CTCF.p2:-19:0.826
chr6	88414948	88415129	reg1024045.p2	5.312	+	AK001204 NM_018064 TSC_hg19_v1_chr6_-_88411988	-3050	-	TSC_hg19_v1_chr6_-_88411949 AK222701	-3090	-	TSC_hg19_v1_chr6_-_88411885 BC000764 BC003042	-3129	-	BC029488 NM_030960 AF203447	342492	+	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	439998	-	NM_001160226 NM_001160258 NM_001160259 NM_016083	460728	-	AK001204|AKIRIN2|55122|akirin 2##NM_018064|AKIRIN2|55122|akirin 2##AK222701|AKIRIN2|55122|akirin 2##BC000764|AKIRIN2|55122|akirin 2##BC003042|AKIRIN2|55122|akirin 2##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)	0.0	
chr7	50764507	50764639	reg1027485.p1	5.312	+	M88700 TSC_hg19_v1_chr7_-_50633103 AK298392 NM_001082971	-131476	-	AJ310724 BC000485 BC008366 M76180 AK298321 NM_000790 NM_001242886 NM_001242887 NM_001242888 NM_001242889 NM_001242890 TSC_hg19_v1_chr7_-_50628769	-135814	-	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	-246519	-	NM_001001550 U66065 U69276	8424	-	AF000017 AB000731 AF001534 NM_001001549 NM_005311 U34355	35460	-	D86962 TSC_hg19_v1_chr7_-_50860699	96116	-	M88700|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298392|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001082971|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AJ310724|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC000485|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC008366|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##M76180|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##AK298321|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_000790|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242886|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242887|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242888|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242889|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##NM_001242890|DDC|1644|dopa decarboxylase (aromatic L-amino acid decarboxylase)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1##NM_001001550|GRB10|2887|growth factor receptor-bound protein 10##U66065|GRB10|2887|growth factor receptor-bound protein 10##U69276|GRB10|2887|growth factor receptor-bound protein 10##AF000017|GRB10|2887|growth factor receptor-bound protein 10##AB000731|GRB10|2887|growth factor receptor-bound protein 10##AF001534|GRB10|2887|growth factor receptor-bound protein 10##NM_001001549|GRB10|2887|growth factor receptor-bound protein 10##NM_005311|GRB10|2887|growth factor receptor-bound protein 10##U34355|GRB10|2887|growth factor receptor-bound protein 10##D86962|GRB10|2887|growth factor receptor-bound protein 10	0.981585	CTCF.p2:17:0.982
chr11	125215765	125215874	reg1025160.p1	5.311	+	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	-181193	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	-181241	+	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	-234350	-	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	150322	-	TSC_hg19_v1_chr11_+_125439294 NM_001007277 NM_004879	223476	+	TSC_hg19_v1_chr11_+_125439332 AB209820	223506	+	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_001007277|EI24|9538|etoposide induced 2.4 mRNA##NM_004879|EI24|9538|etoposide induced 2.4 mRNA##AB209820|EI24|9538|etoposide induced 2.4 mRNA	0.94152	CTCF.p2:8:0.942
chr11	33709333	33709514	reg1003444.p1	5.311	+	TSC_hg19_v1_chr11_+_33563772 AK124395 NM_012194	-145599	+	TSC_hg19_v1_chr11_+_33363104 AK304063	-346279	+	TSC_hg19_v1_chr11_+_33350077 AY425958	-359313	+	NM_001166692	12862	-	AK309894 NM_001127223 NM_001127225 NM_001127226	34849	-	NM_001127227	35074	-	AK124395|C11orf41|25758|chromosome 11 open reading frame 41##NM_012194|C11orf41|25758|chromosome 11 open reading frame 41##AK304063|HIPK3|10114|homeodomain interacting protein kinase 3##AY425958|HIPK3|10114|homeodomain interacting protein kinase 3##NM_001166692|C11orf91|100131378|chromosome 11 open reading frame 91##AK309894|CD59|966|CD59 molecule, complement regulatory protein##NM_001127223|CD59|966|CD59 molecule, complement regulatory protein##NM_001127225|CD59|966|CD59 molecule, complement regulatory protein##NM_001127226|CD59|966|CD59 molecule, complement regulatory protein##NM_001127227|CD59|966|CD59 molecule, complement regulatory protein	0.663255	CTCF.p2:-3:0.663
chr12	56513230	56513362	reg1024292.p1	5.311	+	TSC_hg19_v1_chr12_+_56512049 AK027357 NM_032786 BC018708	-1287	+	NM_001035267 NM_021104 Z12962 BC102007 BC102008 BC102009 D28462 BC014383 BC070254 BC105286 BC015984 BC070252 BC070253 BC070255 BC105279 BC105296 BC105794 BC105795 BC105799 TSC_hg19_v1_chr12_+_56510418 BC017820 BC062462 BC064907 BC142666 BC142726 BC082759 BC066328 BC032611 BC070483	-2828	+	TSC_hg19_v1_chr12_+_56498422 BC011718 BC032111 BC072007 U59435 BC069786 AB464072 CU675707 DQ893446 DQ896751	-14829	+	TSC_hg19_v1_chr12_+_56522018 NM_001184796 NM_015292 AK022790	8701	+	TSC_hg19_v1_chr12_+_56522044 AK128730	8748	+	TSC_hg19_v1_chr12_+_56522050 AK225035 AK290337 BC004998 BC013880	8761	+	AK027357|ZC3H10|84872|zinc finger CCCH-type containing 10##NM_032786|ZC3H10|84872|zinc finger CCCH-type containing 10##BC018708|ZC3H10|84872|zinc finger CCCH-type containing 10##NM_001035267|RPL41|6171|ribosomal protein L41##NM_021104|RPL41|6171|ribosomal protein L41##Z12962|RPL41|6171|ribosomal protein L41##BC102007|RPL41|6171|ribosomal protein L41##BC102008|RPL41|6171|ribosomal protein L41##BC102009|RPL41|6171|ribosomal protein L41##D28462|RPL41|6171|ribosomal protein L41##BC014383|RPL41|6171|ribosomal protein L41##BC070254|RPL41|6171|ribosomal protein L41##BC105286|RPL41|6171|ribosomal protein L41##BC015984|RPL41|6171|ribosomal protein L41##BC070252|RPL41|6171|ribosomal protein L41##BC070253|RPL41|6171|ribosomal protein L41##BC070255|RPL41|6171|ribosomal protein L41##BC105279|RPL41|6171|ribosomal protein L41##BC105296|RPL41|6171|ribosomal protein L41##BC105794|RPL41|6171|ribosomal protein L41##BC105795|RPL41|6171|ribosomal protein L41##BC105799|RPL41|6171|ribosomal protein L41##BC017820|RPL41|6171|ribosomal protein L41##BC062462|RPL41|6171|ribosomal protein L41##BC064907|RPL41|6171|ribosomal protein L41##BC142666|RPL41|6171|ribosomal protein L41##BC142726|RPL41|6171|ribosomal protein L41##BC082759|RPL41|6171|ribosomal protein L41##BC066328|RPL41|6171|ribosomal protein L41##BC032611|RPL41|6171|ribosomal protein L41##BC070483|RPL41|6171|ribosomal protein L41##BC032111|PA2G4|5036|proliferation-associated 2G4, 38kDa##BC072007|PA2G4|5036|proliferation-associated 2G4, 38kDa##U59435|PA2G4|5036|proliferation-associated 2G4, 38kDa##BC069786|PA2G4|5036|proliferation-associated 2G4, 38kDa##DQ893446|PA2G4|5036|proliferation-associated 2G4, 38kDa##DQ896751|PA2G4|5036|proliferation-associated 2G4, 38kDa##NM_001184796|ESYT1|23344|extended synaptotagmin-like protein 1##NM_015292|ESYT1|23344|extended synaptotagmin-like protein 1##AK022790|ESYT1|23344|extended synaptotagmin-like protein 1##AK128730|ESYT1|23344|extended synaptotagmin-like protein 1##AK225035|ESYT1|23344|extended synaptotagmin-like protein 1##AK290337|ESYT1|23344|extended synaptotagmin-like protein 1##BC004998|ESYT1|23344|extended synaptotagmin-like protein 1##BC013880|ESYT1|23344|extended synaptotagmin-like protein 1	0.043362	
chr14	68779556	68779736	reg1018192.p1	5.311	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-493126	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-496347	-	AK315462 NM_152443	-611044	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	480074	-	NM_001244698 NM_004926	480984	-	NM_001244701 AB528867	483338	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr2	206544821	206544951	reg1022659.p2	5.311	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-1134167	+	TSC_hg19_v1_chr2_+_205410560 AX765687 AX765741 AK056157	-1134292	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	-1134396	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	2292	+	TSC_hg19_v1_chr2_+_206547371 AK290934	2475	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	406025	-	AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK056157|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AK290934|NRP2|8828|neuropilin 2##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D	0.958648	CTCF.p2:-11:0.959
chr22	19760532	19760652	reg1020835.p1	5.311	+	AF012130 AF012131 AF373867 NM_005992 NM_080646 NM_080647	-16367	+	NM_000407 J03259	-49525	+	L20860 TSC_hg19_v1_chr22_+_19710169	-50449	+	TSC_hg19_v1_chr22_-_19842337 AK291262 BX640785 BX640969 BX640998	81749	-	TSC_hg19_v1_chr22_-_19842398 BC012060 NM_024627 BC008696 AB051432 AL832509 AF301895 AF238328 AY007378 NM_053004	81813	-	TSC_hg19_v1_chr22_-_19929293 AB209724	168686	-	AF012130|TBX1|6899|T-box 1##AF012131|TBX1|6899|T-box 1##AF373867|TBX1|6899|T-box 1##NM_005992|TBX1|6899|T-box 1##NM_080646|TBX1|6899|T-box 1##NM_080647|TBX1|6899|T-box 1##NM_000407|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide##J03259|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide##L20860|SEPT5-GP1BB|100526833|SEPT5-GP1BB readthrough##AK291262|C22orf29|79680|chromosome 22 open reading frame 29##BX640785|C22orf29|79680|chromosome 22 open reading frame 29##BX640969|C22orf29|79680|chromosome 22 open reading frame 29##BX640998|C22orf29|79680|chromosome 22 open reading frame 29##BC012060|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_024627|C22orf29|79680|chromosome 22 open reading frame 29##BC008696|C22orf29|79680|chromosome 22 open reading frame 29##AB051432|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AL832509|C22orf29|79680|chromosome 22 open reading frame 29##AF301895|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AF238328|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AY007378|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_053004|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AB209724|TXNRD2|10587|thioredoxin reductase 2	0.093715	
chr4	14789685	14789797	reg1026889.p2	5.311	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-1160424	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-1240327	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-1243666	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	213968	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	214254	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	214556	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.711254	CTCF.p2:-5:0.711
chr4	81514243	81514386	reg1026480.p1	5.311	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-257417	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	-326455	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	-395660	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	437828	+	AB528214 D70899 NM_006259 X94612	611893	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	878669	-	BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B	0.0	
chr6	106534168	106534275	reg1025922.p2	5.311	+	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	-25	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-683226	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-683263	-	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	14	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	12583	+	BC002699 TSC_hg19_v1_chr6_-_106773313	239087	-	AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	0.0	
chr10	94050706	94050857	reg1027545.p1	5.310	+	AB023157 NM_001178137 TSC_hg19_v1_chr10_-_94003035	-47762	-	TSC_hg19_v1_chr10_+_93683569 AF038362 NM_003972 BC112201 AJ001017	-367089	+	TSC_hg19_v1_chr10_+_93683526 AK308399	-367265	+	TSC_hg19_v1_chr10_-_94050827 BC036444 AK302576 NM_014912	55	-	TSC_hg19_v1_chr10_+_94050959 AK000452 AK309175 NM_017824 AK294799 BC015480 AB191202 AB529108	273	+	AK302578 AK093287 AK316407 AX748033 NM_001165946	206712	-	AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AF038362|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##NM_003972|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##BC112201|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AJ001017|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AK308399|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##BC036444|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK302576|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_014912|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK000452|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK309175|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##NM_017824|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK294799|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##BC015480|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AB191202|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK302578|IDE|3416|insulin-degrading enzyme##AK093287|IDE|3416|insulin-degrading enzyme##AK316407|IDE|3416|insulin-degrading enzyme##NM_001165946|IDE|3416|insulin-degrading enzyme	0.463997	CTCF.p2:-24:0.393
chr12	128771340	128771416	reg1042468.p2	5.310	+	NM_001136103	-19431	+	NM_052907	-2960217	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-3221310	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	537065	-	BC043528 TSC_hg19_v1_chr12_+_129337985	566606	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	566709	+	NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.0	
chr5	118591855	118592015	reg1025983.p1	5.310	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	-184770	+	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	-185124	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	-267697	-	NM_001077654 TSC_hg19_v1_chr5_+_118604492 AK097884 AK001931	12523	+	AF070671 TSC_hg19_v1_chr5_+_118604523	12582	+	BC007014 NM_014350 BC005352 TSC_hg19_v1_chr5_+_118691687	99683	+	NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##NM_001077654|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK097884|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001931|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF070671|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC007014|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_014350|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC005352|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8	0.915411	CTCF.p2:-10:0.915
chr6_dbb_hap3	1992406	1992519	reg1024811.p1	5.310	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.996692	CTCF.p2:5:0.997
chr7	76116214	76116291	reg1021343.p2	5.310	+	AY225124 AY225125 CU679151 DQ893264 DQ896593 NM_001102596	-6426	+	NM_001102594 NM_001102595 NM_020892 BC018555 DQ010329 AK293226 TSC_hg19_v1_chr7_+_76091025 AK023924 AB040961 BC008856 BC026059 BC093079	-25225	+	X56777 M60504 NM_001110354	-61991	+	NM_030570 NM_182684 AK290096 AY233462 BC004304 AK056760 CU678662	23604	+	TSC_hg19_v1_chr7_+_76178647 BC090058	62380	+	TSC_hg19_v1_chr7_+_76178675 BC078169	62423	+	AY225124|DTX2|113878|deltex homolog 2 (Drosophila)##AY225125|DTX2|113878|deltex homolog 2 (Drosophila)##DQ893264|DTX2|113878|deltex homolog 2 (Drosophila)##DQ896593|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102596|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102594|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102595|DTX2|113878|deltex homolog 2 (Drosophila)##NM_020892|DTX2|113878|deltex homolog 2 (Drosophila)##BC018555|DTX2|113878|deltex homolog 2 (Drosophila)##DQ010329|DTX2|113878|deltex homolog 2 (Drosophila)##AK293226|DTX2|113878|deltex homolog 2 (Drosophila)##AK023924|DTX2|113878|deltex homolog 2 (Drosophila)##AB040961|DTX2|113878|deltex homolog 2 (Drosophila)##BC008856|DTX2|113878|deltex homolog 2 (Drosophila)##BC026059|DTX2|113878|deltex homolog 2 (Drosophila)##BC093079|DTX2|113878|deltex homolog 2 (Drosophila)##X56777|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##M60504|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_001110354|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_030570|UPK3B|80761|uroplakin 3B##NM_182684|UPK3B|80761|uroplakin 3B##AK290096|UPK3B|80761|uroplakin 3B##AY233462|UPK3B|80761|uroplakin 3B##BC004304|UPK3B|80761|uroplakin 3B##AK056760|UPK3B|80761|uroplakin 3B##BC090058|LOC100133091|100133091|uncharacterized LOC100133091##BC078169|LOC100133091|100133091|uncharacterized LOC100133091	0.0	
chr8	22562256	22562348	reg1022564.p1	5.310	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-11518	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-11797	-	AK294968 AK295834 NM_001199881	-12228	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	223022	-	AK092617 BC034917 NM_001160036	282621	+	NM_001160037	291058	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.852894	CTCF.p2:0:0.809
chrX	155258349	155258473	reg1022271.p1	5.310	+	M84747 NM_002186 AK303178 BC025298 BC051337 S71404 CU690808	-31070	+	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	-147420	+	AK289543 AK311508 NM_005840 AK125483	-260977	+	None	None	None	None	None	None	None	None	None	M84747|IL9R|3581|interleukin 9 receptor##NM_002186|IL9R|3581|interleukin 9 receptor##AK303178|IL9R|3581|interleukin 9 receptor##BC025298|IL9R|3581|interleukin 9 receptor##BC051337|IL9R|3581|interleukin 9 receptor##S71404|IL9R|3581|interleukin 9 receptor##NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7##AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)	2.060603	CTCF.p2:22:0.980	CTCF.p2:80:1.000
chr1	155953660	155953787	reg1027873.p1	5.309	+	TSC_hg19_v1_chr1_-_155948944 AK295924	-4716	-	BC020567 TSC_hg19_v1_chr1_-_155948334 U72206 NM_001162383 NM_001162384	-5397	-	TSC_hg19_v1_chr1_-_155948245 AF486838	-5497	-	TSC_hg19_v1_chr1_-_155959876 AB014551	6148	-	BC010085 AK222600 D37991 TSC_hg19_v1_chr1_-_155990703 BC000341 AY251536	36983	-	TSC_hg19_v1_chr1_-_155990725 X74104 BC011791 BX649192 AK300678 AK313821 NM_003145	37016	-	AK295924|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##BC020567|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##U72206|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##NM_001162383|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##NM_001162384|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AF486838|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AB014551|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AK222600|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##D37991|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##BC000341|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##AY251536|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##X74104|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##BX649192|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##AK300678|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##AK313821|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)##NM_003145|SSR2|6746|signal sequence receptor, beta (translocon-associated protein beta)	0.988285	CTCF.p2:-1:0.988
chr19	37464307	37464447	reg1023205.p2	5.309	+	NM_001204835 NM_001204836 NM_001204837 NM_001204838 NM_001204839 NM_198539 BC016334 BC031218 BX640681 TSC_hg19_v1_chr19_+_37407267 BC108696 AK299626 AK093123 AX747939 BC131547 BC111777	-57038	+	BC107131 BC107132 TSC_hg19_v1_chr19_-_37407194 CR936826 NM_001037232	-57229	-	TSC_hg19_v1_chr19_-_37406930 BX538288 NM_001171979	-57453	-	TSC_hg19_v1_chr19_+_37569355 AK315728 AK056753 BC026210 NM_144689	104967	+	NM_199126 BC052956	198957	-	AF086428 BC063820 TSC_hg19_v1_chr19_-_37663623 AK056389 NM_152655 AK290660 BC026081	199220	-	NM_001204835|ZNF568|374900|zinc finger protein 568##NM_001204836|ZNF568|374900|zinc finger protein 568##NM_001204837|ZNF568|374900|zinc finger protein 568##NM_001204838|ZNF568|374900|zinc finger protein 568##NM_001204839|ZNF568|374900|zinc finger protein 568##NM_198539|ZNF568|374900|zinc finger protein 568##BC016334|ZNF568|374900|zinc finger protein 568##BC031218|ZNF568|374900|zinc finger protein 568##BX640681|ZNF568|374900|zinc finger protein 568##BC108696|ZNF568|374900|zinc finger protein 568##AK299626|ZNF568|374900|zinc finger protein 568##AK093123|ZNF568|374900|zinc finger protein 568##BC131547|ZNF568|374900|zinc finger protein 568##BC111777|ZNF568|374900|zinc finger protein 568##BC107131|ZNF829|374899|zinc finger protein 829##BC107132|ZNF829|374899|zinc finger protein 829##CR936826|ZNF829|374899|zinc finger protein 829##NM_001037232|ZNF829|374899|zinc finger protein 829##BX538288|ZNF829|374899|zinc finger protein 829##NM_001171979|ZNF829|374899|zinc finger protein 829##AK315728|ZNF420|147923|zinc finger protein 420##AK056753|ZNF420|147923|zinc finger protein 420##BC026210|ZNF420|147923|zinc finger protein 420##NM_144689|ZNF420|147923|zinc finger protein 420##NM_199126|ZNF585A|199704|zinc finger protein 585A##BC052956|ZNF585A|199704|zinc finger protein 585A##AF086428|ZNF585A|199704|zinc finger protein 585A##BC063820|ZNF585A|199704|zinc finger protein 585A##AK056389|ZNF585A|199704|zinc finger protein 585A##NM_152655|ZNF585A|199704|zinc finger protein 585A##AK290660|ZNF585A|199704|zinc finger protein 585A##BC026081|ZNF585A|199704|zinc finger protein 585A	0.368633	CTCF.p2:29:0.369
chr4	181478655	181478801	reg1027647.p2	5.309	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-3115085	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-3115135	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-3115187	-	TSC_hg19_v1_chr4_+_183065111 AK308489	1586397	+	NM_001080477 HE578284 HE578285	1766426	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	2359802	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.0	
chr6	52680419	52680557	reg1025795.p1	5.309	+	BC053578 BC110891 M15872 TSC_hg19_v1_chr6_-_52668615 AK293371 M14777 M21758 M25627 NM_145740 AK310324	-11807	-	AK292602 AK313601 M16594 BC002895 NM_000846	-52172	-	TSC_hg19_v1_chr6_+_52535913 NM_014051 AF239771 AK312063 BC015097 BC019328	-144565	+	NM_153699	30404	-	AF020919 BC020619 NM_000847	93989	-	AK315369 TSC_hg19_v1_chr6_-_52860078 AF020918 AF025887 BC096817 NM_001512	179639	-	BC053578|GSTA1|2938|glutathione S-transferase alpha 1##BC110891|GSTA1|2938|glutathione S-transferase alpha 1##M15872|GSTA1|2938|glutathione S-transferase alpha 1##AK293371|GSTA1|2938|glutathione S-transferase alpha 1##M14777|GSTA1|2938|glutathione S-transferase alpha 1##M21758|GSTA1|2938|glutathione S-transferase alpha 1##M25627|GSTA1|2938|glutathione S-transferase alpha 1##NM_145740|GSTA1|2938|glutathione S-transferase alpha 1##AK310324|GSTA1|2938|glutathione S-transferase alpha 1##AK292602|GSTA2|2939|glutathione S-transferase alpha 2##AK313601|GSTA2|2939|glutathione S-transferase alpha 2##M16594|GSTA2|2939|glutathione S-transferase alpha 2##BC002895|GSTA2|2939|glutathione S-transferase alpha 2##NM_000846|GSTA2|2939|glutathione S-transferase alpha 2##NM_014051|TMEM14A|28978|transmembrane protein 14A##AF239771|TMEM14A|28978|transmembrane protein 14A##AK312063|TMEM14A|28978|transmembrane protein 14A##BC015097|TMEM14A|28978|transmembrane protein 14A##BC019328|TMEM14A|28978|transmembrane protein 14A##NM_153699|GSTA5|221357|glutathione S-transferase alpha 5##AF020919|GSTA3|2940|glutathione S-transferase alpha 3##BC020619|GSTA3|2940|glutathione S-transferase alpha 3##NM_000847|GSTA3|2940|glutathione S-transferase alpha 3##AK315369|GSTA4|2941|glutathione S-transferase alpha 4##AF020918|GSTA4|2941|glutathione S-transferase alpha 4##AF025887|GSTA4|2941|glutathione S-transferase alpha 4##BC096817|GSTA4|2941|glutathione S-transferase alpha 4##NM_001512|GSTA4|2941|glutathione S-transferase alpha 4	0.981327	CTCF.p2:-11:0.981
chr7	150705919	150706035	reg1027185.p2	5.309	+	AK292928 AK302686 M93718 AK315213 TSC_hg19_v1_chr7_+_150690869 AK223636 AK225827 M95296 BC069465 HQ257992 AF400594 DQ256129 DQ256130 DQ256131 NM_001160109 NM_001160110 NM_001160111	-15113	+	NM_000603 BC063294 AK300390	-17810	+	TSC_hg19_v1_chr7_-_150675385 DQ525913 NM_000238 NM_172056	-30608	-	BC128587 AK096734 AY515311 NM_173681	15591	-	TSC_hg19_v1_chr7_+_150725538 AK128129 NM_007188 AK094636 AK002018 AK094005 AK222911 AK294344 AK310796 AK314721 BC141814 BC141836 BC151235 AF047690 BC130036 AK024401 BC143080 BC146829	19586	+	BC030282 NM_004769 NM_020321 NM_020322	39627	+	AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##HQ257992|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ525913|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_000238|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172056|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##NM_007188|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK094636|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK002018|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK094005|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK222911|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK294344|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK310796|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK314721|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC141814|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC141836|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC151235|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AF047690|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK024401|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC143080|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC146829|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC030282|ACCN3|9311|amiloride-sensitive cation channel 3##NM_004769|ACCN3|9311|amiloride-sensitive cation channel 3##NM_020321|ACCN3|9311|amiloride-sensitive cation channel 3##NM_020322|ACCN3|9311|amiloride-sensitive cation channel 3	0.977717	CTCF.p2:-1:0.978
chr14	89884025	89884206	reg1001575.p3	5.308	+	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	-705	-	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-5339	-	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-593122	+	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	201480	-	BC001787 BX247991 AK298930 AK094740 NM_145231	536945	-	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	538131	+	BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1	0.0	
chr17	77015775	77015886	reg1023036.p1	5.308	+	TSC_hg19_v1_chr17_-_77005876 AK074687 AB097006 AB097033 AF328554 AK295930 NM_001159772 NM_001159773 NM_138793	-9951	-	TSC_hg19_v1_chr17_-_77005820 BC017655	-10050	-	BC005104 TSC_hg19_v1_chr17_-_76989827	-26031	-	TSC_hg19_v1_chr17_+_77020250 NM_030968 NM_198594	4412	+	TSC_hg19_v1_chr17_+_77020308 AK055541	4480	+	AF329840 NM_198593 BC021553	14692	+	AK074687|CANT1|124583|calcium activated nucleotidase 1##AB097006|CANT1|124583|calcium activated nucleotidase 1##AB097033|CANT1|124583|calcium activated nucleotidase 1##AF328554|CANT1|124583|calcium activated nucleotidase 1##AK295930|CANT1|124583|calcium activated nucleotidase 1##NM_001159772|CANT1|124583|calcium activated nucleotidase 1##NM_001159773|CANT1|124583|calcium activated nucleotidase 1##NM_138793|CANT1|124583|calcium activated nucleotidase 1##BC017655|CANT1|124583|calcium activated nucleotidase 1##BC005104|CANT1|124583|calcium activated nucleotidase 1##NM_030968|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198594|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1	0.828912	CTCF.p2:-26:0.829
chr3	32944643	32944756	reg1025974.p2	5.308	+	DQ232881 NM_001039111	-85190	+	TSC_hg19_v1_chr3_+_32726700 AK023227 AK022952 NM_015442 AK309670 BC006382 BC002931 BC002928 AK297085 AK298693 CU678296 CU678298 DQ892895 DQ896143 EU831494 EU831581	-217894	+	BX649189 TSC_hg19_v1_chr3_-_32612288 AK222573 AK222653 BC131620 AF078849 AK074348 AK293253 NM_016141	-332425	-	BC071751 NM_005508 AK292674	48401	+	TSC_hg19_v1_chr3_-_33138279 AK300021 AK126979 AK128242 NM_001039770 NM_001136238	193571	-	NM_001079811 TSC_hg19_v1_chr3_-_33138315	193634	-	DQ232881|TRIM71|131405|tripartite motif containing 71##NM_001039111|TRIM71|131405|tripartite motif containing 71##AK023227|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK022952|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##NM_015442|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK309670|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC006382|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002931|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002928|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK297085|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK298693|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ892895|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ896143|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831494|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831581|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC071751|CCR4|1233|chemokine (C-C motif) receptor 4##NM_005508|CCR4|1233|chemokine (C-C motif) receptor 4##AK292674|CCR4|1233|chemokine (C-C motif) receptor 4##AK300021|GLB1|2720|galactosidase, beta 1##AK126979|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##AK128242|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001039770|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001136238|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001079811|GLB1|2720|galactosidase, beta 1	0.936649	CTCF.p2:4:0.937
chr6	51928443	51928567	reg1028304.p1	5.308	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-1141970	+	AY028376 NM_172238	-1247249	+	DQ012016 NM_001037498	-1912142	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	23890	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	122701	+	AF384857 JF305974 AB590713 BC070124 NM_052872	180756	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.82446	CTCF.p2:-8:0.824
chr10	34973566	34973664	reg1023941.p2	5.307	+	TSC_hg19_v1_chr10_-_33623996 BX648025	-1349617	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1349801	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	-1350162	-	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	130536	-	AK310225 AK300491 NM_001198778 NM_001198779	389597	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	405657	-	BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2	0.048335	
chr11	116798008	116798135	reg1027632.p1	5.307	+	X00566 TSC_hg19_v1_chr11_-_116708339 AX752114 AX752116 BC005380 NM_000039 AK292231 BC110286	-89716	-	TSC_hg19_v1_chr11_+_116700622 BC121081 BC134419 NM_000040 BC027977	-97447	+	HQ258218 HQ258399 BC113594 BC113596 BC074764 X13629 M13654 NM_000482 TSC_hg19_v1_chr11_-_116694025	-104105	-	BC128511 BC128510 NM_025164 BC121188 TSC_hg19_v1_chr11_-_116969081	170962	-	TSC_hg19_v1_chr11_+_117015002 NM_001184746 NM_001184747 NM_001184748 NM_002572 AK292973 AK307366 BC000398 BC019301 BC039721 D63390 BC001774 DQ836738 DQ836739 DQ836740 DQ836741 DQ836742 DQ836743	216962	+	TSC_hg19_v1_chr11_+_117049458 AK292501	251486	+	X00566|APOA1|335|apolipoprotein A-I##BC005380|APOA1|335|apolipoprotein A-I##NM_000039|APOA1|335|apolipoprotein A-I##AK292231|APOA1|335|apolipoprotein A-I##BC110286|APOA1|335|apolipoprotein A-I##BC121081|APOC3|345|apolipoprotein C-III##BC134419|APOC3|345|apolipoprotein C-III##NM_000040|APOC3|345|apolipoprotein C-III##BC027977|APOC3|345|apolipoprotein C-III##HQ258218|APOA4|337|apolipoprotein A-IV##HQ258399|APOA4|337|apolipoprotein A-IV##BC113594|APOA4|337|apolipoprotein A-IV##BC113596|APOA4|337|apolipoprotein A-IV##BC074764|APOA4|337|apolipoprotein A-IV##X13629|APOA4|337|apolipoprotein A-IV##M13654|APOA4|337|apolipoprotein A-IV##NM_000482|APOA4|337|apolipoprotein A-IV##BC128511|SIK3|23387|SIK family kinase 3##BC128510|SIK3|23387|SIK family kinase 3##NM_025164|SIK3|23387|SIK family kinase 3##BC121188|SIK3|23387|SIK family kinase 3##NM_001184746|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184747|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184748|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_002572|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292973|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK307366|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC000398|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC019301|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC039721|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##D63390|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC001774|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836738|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836739|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836740|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836741|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836742|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836743|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292501|SIDT2|51092|SID1 transmembrane family, member 2	0.0	
chr1	221967183	221967363	reg1022240.p1	5.307	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-51787	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-51843	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-51865	-	AY358602 BC007638 BC016552 NM_024746	754161	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	795904	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	824127	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.0	
chr16	33716142	33716277	reg1026991.p1	5.307	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-454076	+	AL133588 NM_016212	-454695	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-510611	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	12939063	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	12939097	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	13006853	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	1.105722	CTCF.p2:21:0.979
chr18	27473051	27473163	reg1026352.p1	5.307	+	TSC_hg19_v1_chr18_-_25757363 NM_001792	-1715710	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	-1716070	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-2707874	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	1149595	-	CR749226 TSC_hg19_v1_chr18_-_28681542	1208381	-	TSC_hg19_v1_chr18_-_28682275 EF017811 EF017812 X56807 AK297029 AK290313 BX648425 BC063291 NM_004949 NM_024422	1209084	-	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3##CR749226|DSC2|1824|desmocollin 2##EF017811|DSC2|1824|desmocollin 2##EF017812|DSC2|1824|desmocollin 2##X56807|DSC2|1824|desmocollin 2##AK297029|DSC2|1824|desmocollin 2##AK290313|DSC2|1824|desmocollin 2##BX648425|DSC2|1824|desmocollin 2##BC063291|DSC2|1824|desmocollin 2##NM_004949|DSC2|1824|desmocollin 2##NM_024422|DSC2|1824|desmocollin 2	0.19129	
chr1	207155402	207155582	reg1003662.p1	5.306	+	AK298394 NM_001122979 NM_001170631 NM_032029	-11536	-	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	-35731	-	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	-60205	-	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	50556	-	TSC_hg19_v1_chr1_-_207224335 AL833081 BC137166 BC137167 NM_018566	68867	-	AK292883 TSC_hg19_v1_chr1_+_207226619 NM_001018053 NM_006212 AJ005578 AF470623 AB044805 BC112103 BC112105 BC069350 BC069385 BC069583 BC069586 BC069600 BC075075 BC075076	71145	+	AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116##AL833081|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137166|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137167|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##NM_018566|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##AK292883|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_001018053|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_006212|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AJ005578|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AF470623|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AB044805|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112103|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112105|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069350|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069385|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069583|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069586|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069600|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075075|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075076|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	0.0	
chr11	129637168	129637286	reg1026255.p2	5.305	+	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	-391346	+	EF127492 NM_001142685	-575135	-	AB018255 AY194287 TSC_hg19_v1_chr11_-_128894084 AB079856 NM_014715	-743166	-	TSC_hg19_v1_chr11_+_129685744 AK098106 NM_138788 AK290283 AK292058	48517	+	NM_006165 X80878	125676	-	TSC_hg19_v1_chr11_-_129765453 BC063280	128215	-	AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2##EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##AB018255|ARHGAP32|9743|Rho GTPase activating protein 32##AY194287|ARHGAP32|9743|Rho GTPase activating protein 32##AB079856|ARHGAP32|9743|Rho GTPase activating protein 32##NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32##AK098106|TMEM45B|120224|transmembrane protein 45B##NM_138788|TMEM45B|120224|transmembrane protein 45B##AK290283|TMEM45B|120224|transmembrane protein 45B##AK292058|TMEM45B|120224|transmembrane protein 45B##NM_006165|NFRKB|4798|nuclear factor related to kappaB binding protein##X80878|NFRKB|4798|nuclear factor related to kappaB binding protein##BC063280|NFRKB|4798|nuclear factor related to kappaB binding protein	0.653706	CTCF.p2:-2:0.489
chr13	41927306	41927411	reg1024404.p1	5.305	+	NM_001110798 NM_018527 NM_024561 TSC_hg19_v1_chr13_+_41885376 BC064592 BC032318 AK291248 AK097224 BX640665 BC101719 BC101721 BC143506 CU689326	-41856	+	AK055086 AF072934 TSC_hg19_v1_chr13_-_41837713 BC027731 BC038427 BC042196 BC065496 NM_004294 AK294343	-89678	-	TSC_hg19_v1_chr13_-_41768706 AK299614 AL136782 AK315589 BC022033 FJ150424 NM_032138 AK091344 AX746923	-158733	-	TSC_hg19_v1_chr13_+_42031539 NM_014059	104193	+	TSC_hg19_v1_chr13_+_42031685 BC066334	104325	+	TSC_hg19_v1_chr13_+_42031690 BC038706 AF036549	104342	+	NM_001110798|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_018527|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_024561|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC064592|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC032318|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK291248|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK097224|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BX640665|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101719|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101721|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC143506|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK055086|MTRF1|9617|mitochondrial translational release factor 1##AF072934|MTRF1|9617|mitochondrial translational release factor 1##BC027731|MTRF1|9617|mitochondrial translational release factor 1##BC038427|MTRF1|9617|mitochondrial translational release factor 1##BC042196|MTRF1|9617|mitochondrial translational release factor 1##BC065496|MTRF1|9617|mitochondrial translational release factor 1##NM_004294|MTRF1|9617|mitochondrial translational release factor 1##AK294343|MTRF1|9617|mitochondrial translational release factor 1##AK299614|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AL136782|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK315589|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##BC022033|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##FJ150424|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_032138|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK091344|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15##BC066334|C13orf15|28984|chromosome 13 open reading frame 15##BC038706|C13orf15|28984|chromosome 13 open reading frame 15##AF036549|C13orf15|28984|chromosome 13 open reading frame 15	0.996404	CTCF.p2:-3:0.996
chr19	40887370	40887485	reg1028980.p1	5.305	+	BC000553 TSC_hg19_v1_chr19_+_40872852	-14644	+	TSC_hg19_v1_chr19_+_40854603 BC036327 AK293690 BC096820	-32837	+	TSC_hg19_v1_chr19_-_40854423 EU831761 EU831839 AK094207 CR936760	-32995	-	AK302301 AK301713 AK292228 BC034501 NM_144685 AK057380	8660	-	AF321191 AF321192 NM_020956 NM_181882 BC067266	31844	-	BC002670 AF366402 AF117959 AK222970 AK223011 TSC_hg19_v1_chr19_-_40931900 AK074652 NM_013376	44478	-	BC000553|PLD3|23646|phospholipase D family, member 3##BC036327|PLD3|23646|phospholipase D family, member 3##AK293690|PLD3|23646|phospholipase D family, member 3##BC096820|PLD3|23646|phospholipase D family, member 3##EU831761|C19orf47|126526|chromosome 19 open reading frame 47##EU831839|C19orf47|126526|chromosome 19 open reading frame 47##AK094207|C19orf47|126526|chromosome 19 open reading frame 47##CR936760|C19orf47|126526|chromosome 19 open reading frame 47##AK302301|HIPK4|147746|homeodomain interacting protein kinase 4##AK301713|HIPK4|147746|homeodomain interacting protein kinase 4##AK292228|HIPK4|147746|homeodomain interacting protein kinase 4##BC034501|HIPK4|147746|homeodomain interacting protein kinase 4##NM_144685|HIPK4|147746|homeodomain interacting protein kinase 4##AK057380|HIPK4|147746|homeodomain interacting protein kinase 4##AF321191|PRX|57716|periaxin##AF321192|PRX|57716|periaxin##NM_020956|PRX|57716|periaxin##NM_181882|PRX|57716|periaxin##BC067266|PRX|57716|periaxin##BC002670|SERTAD1|29950|SERTA domain containing 1##AF366402|SERTAD1|29950|SERTA domain containing 1##AF117959|SERTAD1|29950|SERTA domain containing 1##AK222970|SERTAD1|29950|SERTA domain containing 1##AK223011|SERTAD1|29950|SERTA domain containing 1##AK074652|SERTAD1|29950|SERTA domain containing 1##NM_013376|SERTAD1|29950|SERTA domain containing 1	0.0	
chr3	150874535	150874682	reg1029217.p1	5.305	+	AF399708 NM_053002 BC144559	-69931	+	TSC_hg19_v1_chr3_+_150803504 AK128165	-71103	+	AF482697 NM_001195794 NM_174878	-183823	-	AF002986 BC036815 NM_013308	46358	-	AK289617 NM_001081455	92341	-	BC034989 D13626 NM_014879	121583	-	AF399708|MED12L|116931|mediator complex subunit 12-like##NM_053002|MED12L|116931|mediator complex subunit 12-like##BC144559|MED12L|116931|mediator complex subunit 12-like##AK128165|MED12L|116931|mediator complex subunit 12-like##AF482697|CLRN1|7401|clarin 1##NM_001195794|CLRN1|7401|clarin 1##NM_174878|CLRN1|7401|clarin 1##AF002986|GPR171|29909|G protein-coupled receptor 171##BC036815|GPR171|29909|G protein-coupled receptor 171##NM_013308|GPR171|29909|G protein-coupled receptor 171##AK289617|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_001081455|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	0.836164	CTCF.p2:7:0.836
chr4	149952696	149952815	reg1028071.p1	5.305	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-589171	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-589416	-	TSC_hg19_v1_chr4_-_149357955 AB587357	-594773	-	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	1046770	+	NM_006439	1550321	+	TSC_hg19_v1_chr4_-_151770612 AB208838	1817894	-	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.04554	
chr18	72885078	72885145	reg1007300.p1	5.304	+	NM_001146189 NM_001146190 NM_017757	-542193	+	TSC_hg19_v1_chr18_+_72265126 AK056288	-619980	+	TSC_hg19_v1_chr18_-_72265072 BC036588	-620051	-	TSC_hg19_v1_chr18_-_72920993 CU687330 CU689738	35890	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	36001	-	BC018081 NM_175907 TSC_hg19_v1_chr18_-_72921324	36194	-	NM_001146189|ZNF407|55628|zinc finger protein 407##NM_001146190|ZNF407|55628|zinc finger protein 407##NM_017757|ZNF407|55628|zinc finger protein 407##AK056288|ZNF407|55628|zinc finger protein 407##BC036588|LOC400657|400657|uncharacterized LOC400657##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	0.0	
chr7	73598151	73598291	reg1026290.p2	5.304	+	TSC_hg19_v1_chr7_+_73588685 AK290676 BC066928 D26068 NM_022170 NM_031992 BC010021 BC021214 AB385268 DQ891924 DQ895111 DQ895112	-9518	+	TSC_hg19_v1_chr7_+_73588678 AK314749 AK297651	-9580	+	NM_001204426 TSC_hg19_v1_chr7_+_73507550 AK300382	-90704	+	NM_014146 NM_032463 NM_032464	25865	+	TSC_hg19_v1_chr7_+_73624283 BC001609 AK002099 BC006080	26061	+	TSC_hg19_v1_chr7_+_73624338 AF161531 AF252611 AF252612 AF252614 AK225150 AK290074 AK290916	26115	+	AK290676|EIF4H|7458|eukaryotic translation initiation factor 4H##BC066928|EIF4H|7458|eukaryotic translation initiation factor 4H##D26068|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_022170|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_031992|EIF4H|7458|eukaryotic translation initiation factor 4H##BC010021|EIF4H|7458|eukaryotic translation initiation factor 4H##BC021214|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ891924|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ895111|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ895112|EIF4H|7458|eukaryotic translation initiation factor 4H##AK314749|EIF4H|7458|eukaryotic translation initiation factor 4H##AK297651|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_001204426|LIMK1|3984|LIM domain kinase 1##AK300382|LIMK1|3984|LIM domain kinase 1##NM_014146|LAT2|7462|linker for activation of T cells family, member 2##NM_032463|LAT2|7462|linker for activation of T cells family, member 2##NM_032464|LAT2|7462|linker for activation of T cells family, member 2##BC001609|LAT2|7462|linker for activation of T cells family, member 2##AK002099|LAT2|7462|linker for activation of T cells family, member 2##BC006080|LAT2|7462|linker for activation of T cells family, member 2##AF161531|LAT2|7462|linker for activation of T cells family, member 2##AF252611|LAT2|7462|linker for activation of T cells family, member 2##AF252612|LAT2|7462|linker for activation of T cells family, member 2##AF252614|LAT2|7462|linker for activation of T cells family, member 2##AK225150|LAT2|7462|linker for activation of T cells family, member 2##AK290074|LAT2|7462|linker for activation of T cells family, member 2##AK290916|LAT2|7462|linker for activation of T cells family, member 2	0.953345	CTCF.p2:2:0.953
chr11	46300137	46300228	reg1017672.p2	5.303	+	TSC_hg19_v1_chr11_+_46299596 AB463458 CU680776 DQ895809 EU176365	-559	+	BC014097 TSC_hg19_v1_chr11_+_46299557 BC015781 AB063321	-622	+	TSC_hg19_v1_chr11_+_46299212 AK314072 NM_052854	-977	+	AK124594 NM_201532	54272	+	NM_201533 TSC_hg19_v1_chr11_+_46366981 AK303322	66716	+	TSC_hg19_v1_chr11_+_46366983 AK123378 BX648433	66802	+	DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AK124594|DGKZ|8525|diacylglycerol kinase, zeta##NM_201532|DGKZ|8525|diacylglycerol kinase, zeta##NM_201533|DGKZ|8525|diacylglycerol kinase, zeta##AK303322|DGKZ|8525|diacylglycerol kinase, zeta##AK123378|DGKZ|8525|diacylglycerol kinase, zeta##BX648433|DGKZ|8525|diacylglycerol kinase, zeta	0.221568	CTCF.p2:-12:0.222
chr18	43753777	43753958	reg1013363.p2	5.302	+	AY360137 NM_138443 AK097403 TSC_hg19_v1_chr18_+_43684350 BC014003 AK315605 BC005958 AB463535	-69530	+	NM_001001937	-69669	-	TSC_hg19_v1_chr18_-_43678288 AK310051 NM_004046	-75586	-	TSC_hg19_v1_chr18_+_43754002 NM_001008239 NM_145055 AK292981	127	+	TSC_hg19_v1_chr18_+_43754007 BC084579	148	+	TSC_hg19_v1_chr18_+_43754065 AK289738	215	+	AY360137|HAUS1|115106|HAUS augmin-like complex, subunit 1##NM_138443|HAUS1|115106|HAUS augmin-like complex, subunit 1##AK097403|HAUS1|115106|HAUS augmin-like complex, subunit 1##BC014003|HAUS1|115106|HAUS augmin-like complex, subunit 1##AK315605|HAUS1|115106|HAUS augmin-like complex, subunit 1##BC005958|HAUS1|115106|HAUS augmin-like complex, subunit 1##NM_001001937|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##AK310051|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##NM_004046|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##NM_001008239|C18orf25|147339|chromosome 18 open reading frame 25##NM_145055|C18orf25|147339|chromosome 18 open reading frame 25##AK292981|C18orf25|147339|chromosome 18 open reading frame 25##BC084579|C18orf25|147339|chromosome 18 open reading frame 25##AK289738|C18orf25|147339|chromosome 18 open reading frame 25	0.034441	
chr3	141079970	141080150	reg1004006.p2	5.302	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	-37004	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	-129374	+	AF403029 BC008324 NM_080862 AK056367	-309303	+	TSC_hg19_v1_chr3_+_141087345 AK311501	7297	+	AK311479 TSC_hg19_v1_chr3_+_141105293	25228	+	TSC_hg19_v1_chr3_+_141205882 AK292016 AK301015 AF115573 D78155 D82880 NM_006506	125811	+	BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38##AK292016|RASA2|5922|RAS p21 protein activator 2##AK301015|RASA2|5922|RAS p21 protein activator 2##AF115573|RASA2|5922|RAS p21 protein activator 2##D78155|RASA2|5922|RAS p21 protein activator 2##D82880|RASA2|5922|RAS p21 protein activator 2##NM_006506|RASA2|5922|RAS p21 protein activator 2	0.0	
chr7	23736723	23736830	reg1025650.p1	5.302	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	-16953	+	TSC_hg19_v1_chr7_+_23637005 NM_138771 AK289911 AY358713 AX721042	-99761	+	CU677835 DQ892442 DQ895653 AB528532 TSC_hg19_v1_chr7_-_23571604 BC069011 BC017094 U53209 AB097048 AK300565 AK311687 AK314801 AK300741 AK310719 AK298815 NM_013293	-165212	-	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	13140	+	BC029497 NM_000905 AK312156 K01911 M15789	587067	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	876312	+	NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##NM_138771|CCDC126|90693|coiled-coil domain containing 126##AK289911|CCDC126|90693|coiled-coil domain containing 126##AY358713|CCDC126|90693|coiled-coil domain containing 126##DQ892442|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##DQ895653|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC069011|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC017094|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##U53209|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AB097048|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK300565|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK311687|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK314801|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK300741|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK310719|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK298815|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##NM_013293|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)	0.997958	CTCF.p2:-4:0.998
chrX	153150089	153150180	reg1026836.p1	5.302	+	NM_000425 NM_001143963 NM_024003 BC126229 BC136447 TSC_hg19_v1_chrX_-_153141452	-8683	-	AB102653 EF506611 X59847 M74387 M77640 AK289754 TSC_hg19_v1_chrX_-_153141346	-8819	-	TSC_hg19_v1_chrX_-_153096000 AB103478 NM_032512 AK127016	-54126	-	TSC_hg19_v1_chrX_-_153151599 BC021858	1468	-	NM_000054 NM_001146151 Z11687 AF030626 AF032388 AF101727 AF101728 BC101484 BC112181 AB527584 AY242131	20429	+	D50921 AM392626 AM393222 AB384442 TSC_hg19_v1_chrX_-_153191680	41528	-	NM_000425|L1CAM|3897|L1 cell adhesion molecule##NM_001143963|L1CAM|3897|L1 cell adhesion molecule##NM_024003|L1CAM|3897|L1 cell adhesion molecule##BC126229|L1CAM|3897|L1 cell adhesion molecule##BC136447|L1CAM|3897|L1 cell adhesion molecule##AB102653|L1CAM|3897|L1 cell adhesion molecule##EF506611|L1CAM|3897|L1 cell adhesion molecule##X59847|L1CAM|3897|L1 cell adhesion molecule##M74387|L1CAM|3897|L1 cell adhesion molecule##M77640|L1CAM|3897|L1 cell adhesion molecule##AK289754|L1CAM|3897|L1 cell adhesion molecule##AB103478|PDZD4|57595|PDZ domain containing 4##NM_032512|PDZD4|57595|PDZ domain containing 4##AK127016|PDZD4|57595|PDZ domain containing 4##NM_000054|AVPR2|554|arginine vasopressin receptor 2##NM_001146151|AVPR2|554|arginine vasopressin receptor 2##Z11687|AVPR2|554|arginine vasopressin receptor 2##AF030626|AVPR2|554|arginine vasopressin receptor 2##AF032388|AVPR2|554|arginine vasopressin receptor 2##AF101727|AVPR2|554|arginine vasopressin receptor 2##AF101728|AVPR2|554|arginine vasopressin receptor 2##BC101484|AVPR2|554|arginine vasopressin receptor 2##BC112181|AVPR2|554|arginine vasopressin receptor 2##AY242131|AVPR2|554|arginine vasopressin receptor 2##D50921|ARHGAP4|393|Rho GTPase activating protein 4##AM392626|ARHGAP4|393|Rho GTPase activating protein 4##AM393222|ARHGAP4|393|Rho GTPase activating protein 4	0.063844	
chr10	114235540	114235651	reg1026704.p1	5.301	+	TSC_hg19_v1_chr10_-_114207307 AK308026	-28290	-	TSC_hg19_v1_chr10_+_114206991 BC017052 AK303646	-28584	+	TSC_hg19_v1_chr10_+_114206756 AK095476 NM_145206 BC064614	-28831	+	TSC_hg19_v1_chr10_+_114710005 AK225809 NM_001146274 NM_001146283 NM_001146284 NM_001146285 NM_001146286 NM_001198525 NM_001198526 NM_001198527 NM_001198528 NM_001198529 NM_001198530 NM_001198531 NM_030756 FJ010174 Y11306 AK315243 FJ010168 FJ010169 FJ010172 FJ010166 FJ010167 FJ010170 BC032656 FJ010171 AK299295 AB440195 AB451266 CR536574 HM352838 HM352839 HM352840 HM352841 HM352842 HM352843 HM352844 HM352845 HM352846 HM352847 HM352848 HM352849 HM352850 HM352851 BX648364	474707	+	TSC_hg19_v1_chr10_+_114710785 FJ010164 FJ010165 FJ010173	475238	+	AK303948 NM_001177660	1074994	+	AK308026|ZDHHC6|64429|zinc finger, DHHC-type containing 6##BC017052|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##AK303646|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##NM_145206|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010164|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010165|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010173|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK303948|HABP2|3026|hyaluronan binding protein 2##NM_001177660|HABP2|3026|hyaluronan binding protein 2	0.732378	CTCF.p2:-33:0.732
chr4	70201229	70201378	reg1027750.p1	5.301	+	AF177272 AF177273 AF177274 NM_001207004 NM_053039 AB451456	-55086	+	AF016492 BC069441 BC107059 BC107060 NM_001073 AK222839 AK222872 AK292738 AK298432 BC113649	-120846	-	AK313190 TSC_hg19_v1_chr4_+_69962191 BC030974 NM_001074 BC107727 AK223142 J05428 DQ893657 DQ895814	-239089	+	AY529122 DQ895203 AF064200 AF081793 AJ005162 Y00317 BC026264 TSC_hg19_v1_chr4_-_70361624 AK292748 NM_021139	160299	-	FJ664272 FJ664273 NM_001105677	304056	-	AK314209 AK304249 NM_001252274 NM_001252275 NM_006798	317662	-	AF177272|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF177273|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF177274|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##NM_001207004|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##NM_053039|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AB451456|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF016492|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC069441|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC107059|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC107060|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##NM_001073|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##AK222839|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK222872|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK292738|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK298432|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##BC113649|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK313190|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##BC030974|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##NM_001074|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##AK223142|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##J05428|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##DQ893657|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##DQ895814|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##AY529122|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##DQ895203|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF064200|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF081793|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AJ005162|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##Y00317|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##BC026264|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AK292748|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##NM_021139|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##FJ664272|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##FJ664273|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##NM_001105677|UGT2A2|574537|UDP glucuronosyltransferase 2 family, polypeptide A2##AK314209|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##AK304249|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252274|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_001252275|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus##NM_006798|UGT2A1|10941|UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus	0.0	
chr10	93834055	93834166	reg1023572.p1	5.300	+	TSC_hg19_v1_chr10_+_93683569 AF038362 NM_003972 BC112201 AJ001017	-150418	+	TSC_hg19_v1_chr10_+_93683526 AK308399	-150594	+	AK315427 BC025966 AK075410 NM_152429	-164890	-	AB023157 NM_001178137 TSC_hg19_v1_chr10_-_94003035	168909	-	TSC_hg19_v1_chr10_-_94050827 BC036444 AK302576 NM_014912	216726	-	TSC_hg19_v1_chr10_+_94050959 AK000452 AK309175 NM_017824 AK294799 BC015480 AB191202 AB529108	216944	+	AF038362|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##NM_003972|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##BC112201|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AJ001017|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AK308399|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AK315427|FGFBP3|143282|fibroblast growth factor binding protein 3##BC025966|FGFBP3|143282|fibroblast growth factor binding protein 3##AK075410|FGFBP3|143282|fibroblast growth factor binding protein 3##NM_152429|FGFBP3|143282|fibroblast growth factor binding protein 3##AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##BC036444|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK302576|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_014912|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK000452|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK309175|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##NM_017824|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK294799|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##BC015480|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AB191202|MARCH5|54708|membrane-associated ring finger (C3HC4) 5	0.84798	CTCF.p2:-22:0.848
chr11	125034394	125034472	reg1025416.p2	5.300	+	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	-52964	-	NM_001080546	-61229	-	TSC_hg19_v1_chr11_+_124933200 AK290314 AK074100 BC051314 CU690800	-101203	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	145	+	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	193	+	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	331708	-	BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##NM_001080546|TMEM218|219854|transmembrane protein 218##AK290314|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##AK074100|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##BC051314|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)	0.25149	CTCF.p2:20:0.251
chr1	222152873	222153036	reg1024266.p1	5.300	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-237468	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-237524	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-237546	-	AY358602 BC007638 BC016552 NM_024746	568480	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	610223	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	638446	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.0	
chr4	129783819	129784000	reg1004233.p2	5.300	+	TSC_hg19_v1_chr4_+_129732427 BC032376	-51456	+	TSC_hg19_v1_chr4_+_129730875 NM_024900 NM_199320 AK027620 AF520952 AK304815 AK127326	-53039	+	AK131272 NM_006320	-573926	-	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	230681	-	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	230958	+	NM_001099783	233372	+	BC032376|PHF17|79960|PHD finger protein 17##NM_024900|PHF17|79960|PHD finger protein 17##NM_199320|PHF17|79960|PHD finger protein 17##AK027620|PHF17|79960|PHD finger protein 17##AF520952|PHF17|79960|PHD finger protein 17##AK304815|PHF17|79960|PHD finger protein 17##AK127326|PHF17|79960|PHD finger protein 17##AK131272|PGRMC2|10424|progesterone receptor membrane component 2##NM_006320|PGRMC2|10424|progesterone receptor membrane component 2##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33	0.0	
chr4	99071663	99071773	reg1024408.p1	5.300	+	CU691442 BC036870 NM_174952	-7373	-	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	-2310460	+	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	-2601342	-	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	110876	+	TSC_hg19_v1_chr4_-_99579781 BC009704 AF065389 AK315723 NM_005723	508041	-	AK300982 NM_001130678 AB528981 DQ890728 DQ893903 TSC_hg19_v1_chr4_-_99850278 BC012611 BC107715 AK295083	778542	-	BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC009704|TSPAN5|10098|tetraspanin 5##AF065389|TSPAN5|10098|tetraspanin 5##AK315723|TSPAN5|10098|tetraspanin 5##NM_005723|TSPAN5|10098|tetraspanin 5##AK300982|EIF4E|1977|eukaryotic translation initiation factor 4E##NM_001130678|EIF4E|1977|eukaryotic translation initiation factor 4E##DQ890728|EIF4E|1977|eukaryotic translation initiation factor 4E##DQ893903|EIF4E|1977|eukaryotic translation initiation factor 4E##BC012611|EIF4E|1977|eukaryotic translation initiation factor 4E##BC107715|EIF4E|1977|eukaryotic translation initiation factor 4E	0.685687	CTCF.p2:-14:0.686
chr6	129942533	129942682	reg1031355.p1	5.300	+	NM_000426 NM_001079823 Z26653	-738294	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-1100951	-	AK124031 NM_001164687	-1702849	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	88719	-	NM_001010876	239808	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	397118	+	NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	0.995149	CTCF.p2:-12:0.995
chr6	42007183	42007305	reg1021337.p1	5.300	+	AB385206 CR542246 DQ891748 DQ895130 BC011616 M90814 TSC_hg19_v1_chr6_-_41909544 AK315421 AK299187 M92287 NM_001136125 NM_001760	-97745	-	TSC_hg19_v1_chr6_+_41889236 CU690756	-117977	+	TSC_hg19_v1_chr6_+_41889209 AK314147 BC007340	-118035	+	TSC_hg19_v1_chr6_-_42016453 AK303452 AB209825 AK057206 AK097856	9174	-	NM_001136017 NM_001136126	9365	-	BC033728 NM_138572 TSC_hg19_v1_chr6_+_42018261 AK057383 BC119678 BC119679 AL833401	11012	+	CR542246|CCND3|896|cyclin D3##DQ891748|CCND3|896|cyclin D3##DQ895130|CCND3|896|cyclin D3##BC011616|CCND3|896|cyclin D3##M90814|CCND3|896|cyclin D3##AK315421|CCND3|896|cyclin D3##AK299187|CCND3|896|cyclin D3##M92287|CCND3|896|cyclin D3##NM_001136125|CCND3|896|cyclin D3##NM_001760|CCND3|896|cyclin D3##AK314147|BYSL|705|bystin-like##BC007340|BYSL|705|bystin-like##AK303452|CCND3|896|cyclin D3##AB209825|CCND3|896|cyclin D3##AK057206|CCND3|896|cyclin D3##AK097856|CCND3|896|cyclin D3##NM_001136017|CCND3|896|cyclin D3##NM_001136126|CCND3|896|cyclin D3##BC033728|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##NM_138572|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AK057383|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119678|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119679|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AL833401|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa	0.0	
chr9	107257230	107257320	reg1025101.p1	5.300	+	TSC_hg19_v1_chr9_+_106856844 BC071750 NM_001042550 AK001485 BC032705 BC107891	-400403	+	TSC_hg19_v1_chr9_+_106856625 AY739716 BC130385 BC144163	-400622	+	TSC_hg19_v1_chr9_+_106856601 AL833191 NM_001042551 NM_006444 BC055081 BC061906 AK307752 AK292599 BC017845 AF092563	-400704	+	BC140739 AB529294 NM_001004485	9223	+	NM_001001919 AB463956	32214	-	AB529293 NM_001001961 BC136949 BC136952	41839	-	BC071750|SMC2|10592|structural maintenance of chromosomes 2##NM_001042550|SMC2|10592|structural maintenance of chromosomes 2##AK001485|SMC2|10592|structural maintenance of chromosomes 2##BC032705|SMC2|10592|structural maintenance of chromosomes 2##BC107891|SMC2|10592|structural maintenance of chromosomes 2##AY739716|SMC2|10592|structural maintenance of chromosomes 2##BC130385|SMC2|10592|structural maintenance of chromosomes 2##BC144163|SMC2|10592|structural maintenance of chromosomes 2##AL833191|SMC2|10592|structural maintenance of chromosomes 2##NM_001042551|SMC2|10592|structural maintenance of chromosomes 2##NM_006444|SMC2|10592|structural maintenance of chromosomes 2##BC055081|SMC2|10592|structural maintenance of chromosomes 2##BC061906|SMC2|10592|structural maintenance of chromosomes 2##AK307752|SMC2|10592|structural maintenance of chromosomes 2##AK292599|SMC2|10592|structural maintenance of chromosomes 2##BC017845|SMC2|10592|structural maintenance of chromosomes 2##AF092563|SMC2|10592|structural maintenance of chromosomes 2##BC140739|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1##NM_001004485|OR13F1|138805|olfactory receptor, family 13, subfamily F, member 1##NM_001001919|OR13C4|138804|olfactory receptor, family 13, subfamily C, member 4##NM_001001961|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3##BC136949|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3##BC136952|OR13C3|138803|olfactory receptor, family 13, subfamily C, member 3	0.938947	CTCF.p2:33:0.939
chr11	67056494	67056609	reg1026497.p2	5.299	+	TSC_hg19_v1_chr11_+_67034167 CU691526 DQ891148 DQ894328	-22378	+	TSC_hg19_v1_chr11_+_67034155 M80776	-22398	+	TSC_hg19_v1_chr11_+_67033929 BC037963 BC090863	-22617	+	NM_207354 TSC_hg19_v1_chr11_+_67056786 BC110419	223	+	TSC_hg19_v1_chr11_+_67056815 AK124721 AK096277 AK126438	292	+	NM_017857 TSC_hg19_v1_chr11_+_67070955 AK000522	14390	+	DQ891148|ADRBK1|156|adrenergic, beta, receptor kinase 1##DQ894328|ADRBK1|156|adrenergic, beta, receptor kinase 1##M80776|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC037963|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC090863|ADRBK1|156|adrenergic, beta, receptor kinase 1##NM_207354|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##BC110419|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK124721|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK096277|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK126438|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##NM_017857|SSH3|54961|slingshot homolog 3 (Drosophila)##AK000522|SSH3|54961|slingshot homolog 3 (Drosophila)	0.160475	
chr17	1235780	1235957	reg1004509.p1	5.299	+	AB090231 NM_172367 BC142615	-52904	+	NM_001164405	-62011	+	TSC_hg19_v1_chr17_-_1090565 AK126882 AK124547 NM_001159746	-145280	-	TSC_hg19_v1_chr17_-_1248347 L13388	12488	-	TSC_hg19_v1_chr17_-_1303504 BT007161 CU674076 EU176525 U28936 AB590347 BC000179 AX775995 U43399 U43430 U54778 U20972 BC001440 AY883089 AK295260 AK295997 AK296050 AK296555 AK128785 AK316185 AK316201	67601	-	TSC_hg19_v1_chr17_-_1303556 NM_006761	67685	-	AB090231|TUSC5|286753|tumor suppressor candidate 5##NM_172367|TUSC5|286753|tumor suppressor candidate 5##BC142615|TUSC5|286753|tumor suppressor candidate 5##NM_001164405|BHLHA9|727857|basic helix-loop-helix family, member a9##AK126882|ABR|29|active BCR-related gene##AK124547|ABR|29|active BCR-related gene##NM_001159746|ABR|29|active BCR-related gene##L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BT007161|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##EU176525|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U28936|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC000179|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43399|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43430|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U54778|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U20972|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC001440|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AY883089|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295260|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295997|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296050|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296555|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK128785|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316185|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316201|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##NM_006761|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	0.0	
chr19	35154002	35154108	reg1020628.p1	5.299	+	BC093909 BC093935 NM_001025591	-68566	-	TSC_hg19_v1_chr19_+_34972869 NM_001080436	-181183	+	TSC_hg19_v1_chr19_+_34919329 DQ893423 EU176757 CU678406 AF110957 BT009781 CR456756	-234714	+	TSC_hg19_v1_chr19_+_35168582 AL834318 NM_001012320 NM_018443 AK074901 AF155656 AK315241 AF190157 AK297551 AK131278 BC024176 AF265236 AF326206	14594	+	TSC_hg19_v1_chr19_+_35225102 BC043228	71043	+	TSC_hg19_v1_chr19_+_35225150 AK295492	71101	+	BC093909|SCGBL|284402|secretoglobin-like##BC093935|SCGBL|284402|secretoglobin-like##NM_001025591|SCGBL|284402|secretoglobin-like##NM_001080436|WTIP|126374|Wilms tumor 1 interacting protein##DQ893423|UBA2|10054|ubiquitin-like modifier activating enzyme 2##EU176757|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AF110957|UBA2|10054|ubiquitin-like modifier activating enzyme 2##BT009781|UBA2|10054|ubiquitin-like modifier activating enzyme 2##CR456756|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AL834318|ZNF302|55900|zinc finger protein 302##NM_001012320|ZNF302|55900|zinc finger protein 302##NM_018443|ZNF302|55900|zinc finger protein 302##AK074901|ZNF302|55900|zinc finger protein 302##AF155656|ZNF302|55900|zinc finger protein 302##AK315241|ZNF302|55900|zinc finger protein 302##AF190157|ZNF302|55900|zinc finger protein 302##AK131278|ZNF302|55900|zinc finger protein 302##BC024176|ZNF302|55900|zinc finger protein 302##AF265236|ZNF302|55900|zinc finger protein 302##AF326206|ZNF302|55900|zinc finger protein 302##BC043228|ZNF181|339318|zinc finger protein 181##AK295492|ZNF181|339318|zinc finger protein 181	0.986502	CTCF.p2:-11:0.987
chr3	10814558	10814699	reg1028058.p2	5.299	+	L20977 TSC_hg19_v1_chr3_-_10749723	-64906	-	AB210008 TSC_hg19_v1_chr3_-_10547352	-267282	-	AK308898 NM_001001331 NM_001683 TSC_hg19_v1_chr3_-_10547271	-267359	-	TSC_hg19_v1_chr3_+_10857912 AK312719 BC036083 NM_014229 S75989 AB527355	43279	+	NM_003042 TSC_hg19_v1_chr3_+_11034421	219793	+	TSC_hg19_v1_chr3_+_11034439 BC057291 BC033904	219834	+	L20977|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC057291|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC033904|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1	0.326702	CTCF.p2:7:0.327
chr5	66505020	66505110	reg1007308.p1	5.299	+	BC109069 BC109070 D83597 NM_005582 AK313177	-12465	-	AY830839 BC018692 NM_015183	-380462	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-612857	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	1006515	+	TSC_hg19_v1_chr5_+_67511602 BC094795	1006542	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	1079229	+	BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.0	
chr2	112231231	112231338	reg1026136.p1	5.298	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-352797	+	AK300513 NM_001142807 BC022268	-741105	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-795462	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	410342	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	410477	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	424901	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.475811	CTCF.p2:12:0.476
chr2	8561991	8562146	reg1025917.p1	5.298	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1504481	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1544205	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1555365	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	260135	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	415651	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	581753	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.089438	
chr4	24981762	24981850	reg1005513.p1	5.298	+	AK302905 AL834257 NM_173463	-9	-	AK125353 BC057761 BC067735 NM_001130726 TSC_hg19_v1_chr4_-_24914655	-67225	-	TSC_hg19_v1_chr4_+_24797207 BC014418 J02947	-184588	+	AB067503 AF467955 AJ487516 AJ487958 BC101759 BC101761 NM_018176 TSC_hg19_v1_chr4_-_25032569	50631	-	AF146396 AJ277541 BC117202 BC126213 TSC_hg19_v1_chr4_-_25162072 AJ238617 EU832146 EU832239 BC023539 BX648976 BC012188 AK292476 NM_016955	180249	-	AK296302 AK095450 TSC_hg19_v1_chr4_+_25162325	180499	+	AK302905|CCDC149|91050|coiled-coil domain containing 149##AL834257|CCDC149|91050|coiled-coil domain containing 149##NM_173463|CCDC149|91050|coiled-coil domain containing 149##AK125353|CCDC149|91050|coiled-coil domain containing 149##BC057761|CCDC149|91050|coiled-coil domain containing 149##BC067735|CCDC149|91050|coiled-coil domain containing 149##NM_001130726|CCDC149|91050|coiled-coil domain containing 149##BC014418|SOD3|6649|superoxide dismutase 3, extracellular##J02947|SOD3|6649|superoxide dismutase 3, extracellular##AB067503|LGI2|55203|leucine-rich repeat LGI family, member 2##AF467955|LGI2|55203|leucine-rich repeat LGI family, member 2##AJ487516|LGI2|55203|leucine-rich repeat LGI family, member 2##AJ487958|LGI2|55203|leucine-rich repeat LGI family, member 2##BC101759|LGI2|55203|leucine-rich repeat LGI family, member 2##BC101761|LGI2|55203|leucine-rich repeat LGI family, member 2##NM_018176|LGI2|55203|leucine-rich repeat LGI family, member 2##AF146396|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ277541|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC117202|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC126213|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ238617|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832146|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832239|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC023539|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BX648976|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC012188|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AK292476|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##NM_016955|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AK296302|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK095450|LOC285540|285540|uncharacterized LOC285540	0.993794	
chr6	93746669	93746767	reg1028020.p2	5.298	+	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-2449880	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-2450035	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-2740106	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	382465	-	TSC_hg19_v1_chr6_-_96025325 BC047582	2278571	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	2278683	+	BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha	0.948556	CTCF.p2:0:0.949
chr1	109743868	109743961	reg1027435.p1	5.297	+	BC125208 TSC_hg19_v1_chr1_+_109656794 AK297221 AK297478 AK304003	-87127	+	TSC_hg19_v1_chr1_+_109656726 AK057647	-87188	+	TSC_hg19_v1_chr1_+_109656574 NM_020775	-87314	+	TSC_hg19_v1_chr1_+_109756523 NM_006513	12585	+	BC111398 X91257 TSC_hg19_v1_chr1_+_109756539	12625	+	TSC_hg19_v1_chr1_+_109756553 AK222677 AK312771	12636	+	BC125208|KIAA1324|57535|KIAA1324##AK297221|KIAA1324|57535|KIAA1324##AK297478|KIAA1324|57535|KIAA1324##AK304003|KIAA1324|57535|KIAA1324##AK057647|KIAA1324|57535|KIAA1324##NM_020775|KIAA1324|57535|KIAA1324##NM_006513|SARS|6301|seryl-tRNA synthetase##BC111398|SARS|6301|seryl-tRNA synthetase##X91257|SARS|6301|seryl-tRNA synthetase##AK222677|SARS|6301|seryl-tRNA synthetase##AK312771|SARS|6301|seryl-tRNA synthetase	0.816549	CTCF.p2:8:0.817
chr11	90168142	90168265	reg1026957.p1	5.297	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-183793	+	AK290231 NM_001144073 NM_012124	-211672	-	CU687242 BC002339 BC072461 TSC_hg19_v1_chr11_-_89956218 AF192466 AK226099 AK225565 AK312663 AF123249 AK225365	-212001	-	NM_001008781	1917058	+	BC069163 NM_005959 U25341 AY521019	2534636	+	TSC_hg19_v1_chr11_-_92930978 CU690400	2762784	-	AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC002339|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC072461|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF192466|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK226099|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225565|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK312663|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF123249|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225365|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B	0.304405	CTCF.p2:12:0.304
chr12	133215457	133215572	reg1028921.p2	5.297	+	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	-20110	+	NM_001195520	-28478	-	NM_001142641	-148358	+	BC021559 TSC_hg19_v1_chr12_-_133215909	328	-	TSC_hg19_v1_chr12_-_133263981 U49356 S60080 BC144561 L09561 NM_006231	48426	-	TSC_hg19_v1_chr12_-_133264011 AF128542	48507	-	AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##NM_001142641|FBRSL1|57666|fibrosin-like 1##BC021559|POLE|5426|polymerase (DNA directed), epsilon##U49356|POLE|5426|polymerase (DNA directed), epsilon##S60080|POLE|5426|polymerase (DNA directed), epsilon##BC144561|POLE|5426|polymerase (DNA directed), epsilon##L09561|POLE|5426|polymerase (DNA directed), epsilon##NM_006231|POLE|5426|polymerase (DNA directed), epsilon##AF128542|POLE|5426|polymerase (DNA directed), epsilon	0.749461	CTCF.p2:-6:0.749
chrX	77347808	77347989	reg1015185.p1	5.297	+	NM_001029891 AB528771	-122762	-	AB117973 TSC_hg19_v1_chrX_+_77166237 AK096667 AB208828	-181656	+	TSC_hg19_v1_chrX_+_77166193 AK310748 NM_000052 L06133	-181705	+	NM_000291 TSC_hg19_v1_chrX_+_77359707	11789	+	TSC_hg19_v1_chrX_+_77359742 AK301632 AK303848 AK291081 AK295014 AK295182 AK298855 AK310756 AK312280 BC103752 D28371	11833	+	TSC_hg19_v1_chrX_+_77359756 V00572	11858	+	NM_001029891|PGAM4|441531|phosphoglycerate mutase family member 4##AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##NM_000291|PGK1|5230|phosphoglycerate kinase 1##AK301632|PGK1|5230|phosphoglycerate kinase 1##AK303848|PGK1|5230|phosphoglycerate kinase 1##AK291081|PGK1|5230|phosphoglycerate kinase 1##AK295014|PGK1|5230|phosphoglycerate kinase 1##AK295182|PGK1|5230|phosphoglycerate kinase 1##AK298855|PGK1|5230|phosphoglycerate kinase 1##AK310756|PGK1|5230|phosphoglycerate kinase 1##AK312280|PGK1|5230|phosphoglycerate kinase 1##BC103752|PGK1|5230|phosphoglycerate kinase 1##D28371|PGK1|5230|phosphoglycerate kinase 1##V00572|PGK1|5230|phosphoglycerate kinase 1	0.0	
chr11	64614879	64615059	reg1000764.p2	5.296	+	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	-2880	-	AJ297488 AJ297489 NM_130803 NM_130804	-36204	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	-36775	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	31013	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	31185	-	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	32192	-	AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I##AY007161|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1	0.010226	
chr15	57430598	57430715	reg1026974.p2	5.296	+	TSC_hg19_v1_chr15_+_57210977 M83233	-219656	+	TSC_hg19_v1_chr15_+_57210901 BC050556 BC051769 M80627	-219754	+	TSC_hg19_v1_chr15_+_57210872 AL831981 AK294617 AK310708 AK312710	-219788	+	TSC_hg19_v1_chr15_+_57511630 AK294991 AK304007 AK311359 AK308101 NM_207040 BX537967 AM393573	81011	+	AK056673 AK307410 NM_001252335 NM_032866 TSC_hg19_v1_chr15_+_57668732 AY274808 BC030995 AY610514	238061	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	453509	+	M83233|TCF12|6938|transcription factor 12##BC050556|TCF12|6938|transcription factor 12##BC051769|TCF12|6938|transcription factor 12##M80627|TCF12|6938|transcription factor 12##AL831981|TCF12|6938|transcription factor 12##AK294617|TCF12|6938|transcription factor 12##AK310708|TCF12|6938|transcription factor 12##AK312710|TCF12|6938|transcription factor 12##AK294991|TCF12|6938|transcription factor 12##AK304007|TCF12|6938|transcription factor 12##AK311359|TCF12|6938|transcription factor 12##AK308101|TCF12|6938|transcription factor 12##NM_207040|TCF12|6938|transcription factor 12##BX537967|TCF12|6938|transcription factor 12##AM393573|TCF12|6938|transcription factor 12##AK056673|CGNL1|84952|cingulin-like 1##AK307410|CGNL1|84952|cingulin-like 1##NM_001252335|CGNL1|84952|cingulin-like 1##NM_032866|CGNL1|84952|cingulin-like 1##AY274808|CGNL1|84952|cingulin-like 1##BC030995|CGNL1|84952|cingulin-like 1##AY610514|CGNL1|84952|cingulin-like 1##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1	0.0	
chr20	35028226	35028346	reg1027259.p1	5.296	+	NM_014902	-32843	+	TSC_hg19_v1_chr20_+_34894262 AB023181	-134031	+	TSC_hg19_v1_chr20_+_34824402 BC001751 BC019311 NM_015511	-203863	+	TSC_hg19_v1_chr20_+_35089870 NM_001042486 AK001681	61583	+	NM_183006 BC153874 TSC_hg19_v1_chr20_+_35090197 BC108706	61889	+	TSC_hg19_v1_chr20_+_35169892 NM_006097 NM_181526	141600	+	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##AB023181|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC001751|C20orf4|25980|chromosome 20 open reading frame 4##BC019311|C20orf4|25980|chromosome 20 open reading frame 4##NM_015511|C20orf4|25980|chromosome 20 open reading frame 4##NM_001042486|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##AK001681|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_183006|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC153874|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC108706|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_006097|MYL9|10398|myosin, light chain 9, regulatory##NM_181526|MYL9|10398|myosin, light chain 9, regulatory	0.0	
chr1	206107804	206107911	reg1027345.p1	5.295	+	BC151208 BC136538 BC144233 AF331525 NM_052934 NM_134325	-195291	-	BC039170 BC063477 AK057131 AK290786 TSC_hg19_v1_chr1_-_205819261 NM_152491	-288598	-	TSC_hg19_v1_chr1_+_205782474 AK097788	-325356	+	TSC_hg19_v1_chr1_-_206137445 AK124556	29591	-	BC035696 NM_001123168 BC137545 BC137546	31059	+	NM_000707 AF030512 AF101726 L37112 AB528977 EU432111	116504	+	BC151208|SLC26A9|115019|solute carrier family 26, member 9##BC136538|SLC26A9|115019|solute carrier family 26, member 9##BC144233|SLC26A9|115019|solute carrier family 26, member 9##AF331525|SLC26A9|115019|solute carrier family 26, member 9##NM_052934|SLC26A9|115019|solute carrier family 26, member 9##NM_134325|SLC26A9|115019|solute carrier family 26, member 9##BC039170|PM20D1|148811|peptidase M20 domain containing 1##BC063477|PM20D1|148811|peptidase M20 domain containing 1##AK057131|PM20D1|148811|peptidase M20 domain containing 1##AK290786|PM20D1|148811|peptidase M20 domain containing 1##NM_152491|PM20D1|148811|peptidase M20 domain containing 1##AK124556|LOC100132966|100132966|uncharacterized LOC100132966##BC035696|FAM72A|729533|family with sequence similarity 72, member A##NM_001123168|FAM72A|729533|family with sequence similarity 72, member A##BC137545|FAM72A|729533|family with sequence similarity 72, member A##BC137546|FAM72B|653820|family with sequence similarity 72, member B##NM_000707|AVPR1B|553|arginine vasopressin receptor 1B##AF030512|AVPR1B|553|arginine vasopressin receptor 1B##AF101726|AVPR1B|553|arginine vasopressin receptor 1B##L37112|AVPR1B|553|arginine vasopressin receptor 1B##EU432111|AVPR1B|553|arginine vasopressin receptor 1B	0.08407	
chr14	37026153	37026304	reg1027947.p2	5.295	+	BT009773 DQ892964 DQ896211 D50740 BC006221 U43203 NM_001079668	-36847	-	NM_003317 U33749	-37326	-	TSC_hg19_v1_chr14_-_36982983 BC042093 NM_001101341	-43246	-	BC041090 NM_014360 AF000295 AK313537	25570	-	NM_006194	100544	+	TSC_hg19_v1_chr14_+_37131069 BC001159	104856	+	BT009773|NKX2-1|7080|NK2 homeobox 1##DQ892964|NKX2-1|7080|NK2 homeobox 1##DQ896211|NKX2-1|7080|NK2 homeobox 1##D50740|NKX2-1|7080|NK2 homeobox 1##BC006221|NKX2-1|7080|NK2 homeobox 1##U43203|NKX2-1|7080|NK2 homeobox 1##NM_001079668|NKX2-1|7080|NK2 homeobox 1##NM_003317|NKX2-1|7080|NK2 homeobox 1##U33749|NKX2-1|7080|NK2 homeobox 1##BC042093|SFTA3|253970|surfactant associated 3##NM_001101341|SFTA3|253970|surfactant associated 3##BC041090|NKX2-8|26257|NK2 homeobox 8##NM_014360|NKX2-8|26257|NK2 homeobox 8##AF000295|NKX2-8|26257|NK2 homeobox 8##AK313537|NKX2-8|26257|NK2 homeobox 8##NM_006194|PAX9|5083|paired box 9##BC001159|PAX9|5083|paired box 9	0.878976	CTCF.p2:-17:0.879
chr4	2600487	2600594	reg1026035.p1	5.295	+	NM_001185009 BC031935	-129360	+	TSC_hg19_v1_chr4_+_2470846 AK312534 AK309509 U95140	-129664	+	TSC_hg19_v1_chr4_+_2470845 AB000468	-129696	+	AB000459 AB000460 AB000461 NM_003704 BC136646 BC144337 BC144339 BC144340	26633	+	AK026176 NM_001161527	157210	-	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	157523	-	NM_001185009|RNF4|6047|ring finger protein 4##BC031935|RNF4|6047|ring finger protein 4##AK312534|RNF4|6047|ring finger protein 4##AK309509|RNF4|6047|ring finger protein 4##U95140|RNF4|6047|ring finger protein 4##AB000468|RNF4|6047|ring finger protein 4##AB000459|FAM193A|8603|family with sequence similarity 193, member A##AB000460|FAM193A|8603|family with sequence similarity 193, member A##AB000461|FAM193A|8603|family with sequence similarity 193, member A##NM_003704|FAM193A|8603|family with sequence similarity 193, member A##BC136646|FAM193A|8603|family with sequence similarity 193, member A##BC144337|FAM193A|8603|family with sequence similarity 193, member A##BC144339|FAM193A|8603|family with sequence similarity 193, member A##BC144340|FAM193A|8603|family with sequence similarity 193, member A##AK026176|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001161527|TNIP2|79155|TNFAIP3 interacting protein 2##AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2	0.369587	CTCF.p2:1:0.370
chr6	111265998	111266179	reg1024429.p1	5.295	+	AK302761 NM_001634 TSC_hg19_v1_chr6_+_111195987 AK300330 AL832698 BX640599 NM_001033059 AJ420527 M21154	-70066	+	TSC_hg19_v1_chr6_-_111136673 BC024247	-129362	-	TSC_hg19_v1_chr6_-_111136507 AY028424	-129574	-	AF361492 AF361496 NM_138408 BC104655 TSC_hg19_v1_chr6_+_111279890	13742	+	BC011593 TSC_hg19_v1_chr6_+_111279945 AK057977 EF137904	13870	+	AK292165 TSC_hg19_v1_chr6_+_111303240 AK024740 AK301662 AL833613 BC005347 BC035314 NM_032194 CU690066	37186	+	AK302761|AMD1|262|adenosylmethionine decarboxylase 1##NM_001634|AMD1|262|adenosylmethionine decarboxylase 1##AK300330|AMD1|262|adenosylmethionine decarboxylase 1##AL832698|AMD1|262|adenosylmethionine decarboxylase 1##BX640599|AMD1|262|adenosylmethionine decarboxylase 1##NM_001033059|AMD1|262|adenosylmethionine decarboxylase 1##AJ420527|AMD1|262|adenosylmethionine decarboxylase 1##M21154|AMD1|262|adenosylmethionine decarboxylase 1##BC024247|CDK19|23097|cyclin-dependent kinase 19##AY028424|CDK19|23097|cyclin-dependent kinase 19##AF361492|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AF361496|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##NM_138408|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##BC104655|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##BC011593|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AK057977|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##EF137904|GTF3C6|112495|general transcription factor IIIC, polypeptide 6, alpha 35kDa##AK292165|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK024740|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK301662|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AL833613|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC005347|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC035314|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##NM_032194|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)	0.0	
chr12	63025729	63025828	reg1027022.p1	5.294	+	BC136288 AK098456 NM_175895	-28568	-	AK022671 TSC_hg19_v1_chr12_+_62954346	-71467	+	BC042679 AB017814 AB384555 TSC_hg19_v1_chr12_+_62861012	-164863	+	TSC_hg19_v1_chr12_-_63328666 NM_020700 BC157843	302927	-	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	303147	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	518893	-	BC136288|C12orf61|283416|chromosome 12 open reading frame 61##AK098456|C12orf61|283416|chromosome 12 open reading frame 61##NM_175895|C12orf61|283416|chromosome 12 open reading frame 61##AK022671|MON2|23041|MON2 homolog (S. cerevisiae)##AB017814|MON2|23041|MON2 homolog (S. cerevisiae)##NM_020700|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC157843|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A	0.011118	
chr22	25424606	25424712	reg1026460.p1	5.294	+	BC171801 NM_001145206	-719	+	BC130647 BC130649 CR456388 NM_001001663	-89347	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-222449	+	TSC_hg19_v1_chr22_+_25591072 AK025418	166470	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	171185	+	NM_000496	190952	+	BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AK025418|KIAA1671|85379|KIAA1671##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##NM_000496|CRYBB2|1415|crystallin, beta B2	0.364614	CTCF.p2:-1:0.365
chr3	112301239	112301341	reg1027109.p1	5.294	+	TSC_hg19_v1_chr3_+_112280915 AK098839 AY358994 BC013046 AK000737 AK297411	-20331	+	TSC_hg19_v1_chr3_+_112280894 BC005207 BC010307 NM_017945	-20402	+	TSC_hg19_v1_chr3_-_112280783 AK308919	-20508	-	BC023639 BC042128 TSC_hg19_v1_chr3_-_112358640	57287	-	TSC_hg19_v1_chr3_-_112358758 AK075210	57497	-	TSC_hg19_v1_chr3_-_112359256 AL833034	57965	-	AK098839|SLC35A5|55032|solute carrier family 35, member A5##AY358994|SLC35A5|55032|solute carrier family 35, member A5##BC013046|SLC35A5|55032|solute carrier family 35, member A5##AK000737|SLC35A5|55032|solute carrier family 35, member A5##AK297411|SLC35A5|55032|solute carrier family 35, member A5##BC005207|SLC35A5|55032|solute carrier family 35, member A5##BC010307|SLC35A5|55032|solute carrier family 35, member A5##NM_017945|SLC35A5|55032|solute carrier family 35, member A5##AK308919|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##BC023639|CCDC80|151887|coiled-coil domain containing 80##BC042128|CCDC80|151887|coiled-coil domain containing 80##AK075210|CCDC80|151887|coiled-coil domain containing 80##AL833034|CCDC80|151887|coiled-coil domain containing 80	0.97978	CTCF.p2:-13:0.980
chr12	103899400	103899580	reg1024562.p2	5.293	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	-9744	-	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-547398	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-547969	+	AY311388 AJ295695 NM_017564 AB052958	81571	+	AB032773 TSC_hg19_v1_chr12_-_104234857	335334	-	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	335489	-	AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3	0.0	
chr15	77327535	77327652	reg1027525.p1	5.293	+	TSC_hg19_v1_chr15_+_77287743 AK310072 AB451310 AB451440 AF038602 AF038603 DQ891779 DQ894963 AB528365	-39766	+	AK304052 U94778 AK316220 TSC_hg19_v1_chr15_+_77287720 AK298733	-39887	+	TSC_hg19_v1_chr15_+_77287465 AK309856 NM_003978 AK310126 BC008602	-40103	+	TSC_hg19_v1_chr15_-_77363389 AF054840 CU674348 AB529127 AF133423 AK293677 AK001310 AK001305 BC004280 BC009248 AK075336 AK075482 AK095520 AK298157	35693	-	TSC_hg19_v1_chr15_-_77363454 BC011206 BC000704 AK001326	35890	-	TSC_hg19_v1_chr15_-_77363522 NM_001168412 NM_005724 NM_198902	35951	-	AK310072|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451310|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451440|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038603|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ891779|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ894963|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF054840|TSPAN3|10099|tetraspanin 3##AF133423|TSPAN3|10099|tetraspanin 3##AK293677|TSPAN3|10099|tetraspanin 3##AK001310|TSPAN3|10099|tetraspanin 3##AK001305|TSPAN3|10099|tetraspanin 3##BC004280|TSPAN3|10099|tetraspanin 3##BC009248|TSPAN3|10099|tetraspanin 3##AK075336|TSPAN3|10099|tetraspanin 3##AK075482|TSPAN3|10099|tetraspanin 3##AK298157|TSPAN3|10099|tetraspanin 3##BC011206|TSPAN3|10099|tetraspanin 3##BC000704|TSPAN3|10099|tetraspanin 3##AK001326|TSPAN3|10099|tetraspanin 3##NM_001168412|TSPAN3|10099|tetraspanin 3##NM_005724|TSPAN3|10099|tetraspanin 3##NM_198902|TSPAN3|10099|tetraspanin 3	0.99929	CTCF.p2:19:0.999
chr15	88787255	88787379	reg1023486.p1	5.293	+	NM_152336	-2102076	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-2449122	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-2449220	-	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	12649	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	223311	-	AB049944 NM_022839 NM_176805	223366	+	NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11	0.500106	CTCF.p2:-3:0.329
chr17_ctg5_hap1	1149314	1149448	reg1026051.p1	5.293	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.996219	CTCF.p2:18:0.996
chr19	2476129	2476250	reg1026066.p1	5.293	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-19229	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-19253	-	BT007441 EU832653 EU832731 TSC_hg19_v1_chr19_-_2456904	-19299	-	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	49	+	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	226506	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	226553	-	NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BT007441|LMNB2|84823|lamin B2##EU832653|LMNB2|84823|lamin B2##EU832731|LMNB2|84823|lamin B2##NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7	0.0	
chr4	23616300	23616374	reg1021790.p1	5.293	+	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	-921745	+	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	-1098783	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	-1665953	-	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	275316	-	AF279891 TSC_hg19_v1_chr4_-_24586127	969739	-	TSC_hg19_v1_chr4_-_24586154 AK303506 BC035974	969823	-	BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##NM_147182|KCNIP4|80333|Kv channel interacting protein 4##AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.966503	CTCF.p2:6:0.944
chr9	38708102	38708244	reg1026544.p2	5.293	+	TSC_hg19_v1_chr9_-_38620602 BC056266	-87550	-	AB385522 AB095935 BC152434 NM_147195	-87852	-	TSC_hg19_v1_chr9_-_38424452 AB463783 NM_001007563	-283708	-	AB385498 AK294281 AB051501 BC132737 BC144130 AK056833 NM_033655	580007	-	AK302569 NM_001040065 NM_001085452 BC146855	647512	+	AK302569 NM_001040065 NM_001085452 BC146855	1176788	+	BC056266|ANKRD18A|253650|ankyrin repeat domain 18A##AB095935|ANKRD18A|253650|ankyrin repeat domain 18A##BC152434|ANKRD18A|253650|ankyrin repeat domain 18A##NM_147195|ANKRD18A|253650|ankyrin repeat domain 18A##NM_001007563|IGFBPL1|347252|insulin-like growth factor binding protein-like 1##AK294281|CNTNAP3|79937|contactin associated protein-like 3##AB051501|CNTNAP3|79937|contactin associated protein-like 3##BC132737|CNTNAP3|79937|contactin associated protein-like 3##BC144130|CNTNAP3|79937|contactin associated protein-like 3##AK056833|CNTNAP3|79937|contactin associated protein-like 3##NM_033655|CNTNAP3|79937|contactin associated protein-like 3##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2	0.0	
chr10	71844059	71844204	reg1026326.p2	5.292	+	TSC_hg19_v1_chr10_+_71812601 BC016172 AK022776 AK131057 AF151534 AF336304 AK022475	-31534	+	NM_018649	-31775	+	TSC_hg19_v1_chr10_+_71562275 M59217	-281840	+	TSC_hg19_v1_chr10_-_71892569 AK027403	48417	-	TSC_hg19_v1_chr10_-_71892601 BC023601 AF506757 NM_001198696 NM_032797	48511	-	TSC_hg19_v1_chr10_-_71905958 BC016840	61875	-	BC016172|H2AFY2|55506|H2A histone family, member Y2##AK022776|H2AFY2|55506|H2A histone family, member Y2##AK131057|H2AFY2|55506|H2A histone family, member Y2##AF151534|H2AFY2|55506|H2A histone family, member Y2##AF336304|H2AFY2|55506|H2A histone family, member Y2##AK022475|H2AFY2|55506|H2A histone family, member Y2##NM_018649|H2AFY2|55506|H2A histone family, member Y2##M59217|COL13A1|1305|collagen, type XIII, alpha 1##AK027403|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##BC023601|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##AF506757|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##NM_001198696|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##NM_032797|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2##BC016840|TYSND1|219743|trypsin domain containing 1	0.995647	CTCF.p2:-20:0.996
chr15	51791719	51791832	reg1028083.p1	5.292	+	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	-157981	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	-161011	-	AY517501 NM_207381	-394303	-	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	123198	-	AF453583 NM_001165257 NM_013243 AF078851 TSC_hg19_v1_chr15_+_51973699 AY359093 AK075314 AK296466 AK290175	181856	+	AK129759 DQ892424 DQ895638 TSC_hg19_v1_chr15_-_52029856	238101	-	NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2##AF453583|SCG3|29106|secretogranin III##NM_001165257|SCG3|29106|secretogranin III##NM_013243|SCG3|29106|secretogranin III##AF078851|SCG3|29106|secretogranin III##AY359093|SCG3|29106|secretogranin III##AK075314|SCG3|29106|secretogranin III##AK296466|SCG3|29106|secretogranin III##AK290175|SCG3|29106|secretogranin III##AK129759|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ892424|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ895638|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	0.997296	CTCF.p2:-8:0.997
chr17	48275492	48275673	reg1000439.p1	5.292	+	S67495 TSC_hg19_v1_chr17_-_48274424	-1169	-	Y15917 TSC_hg19_v1_chr17_-_48272117	-3537	-	X98707 TSC_hg19_v1_chr17_-_48271508	-4141	-	AB384988 DQ893571 EU176569 CU691368 M36546 X07884 AB209597 TSC_hg19_v1_chr17_-_48278986	3348	-	TSC_hg19_v1_chr17_-_48278993 BC036531 Z74615 NM_000088	3411	-	AY358204 NM_001168215	73184	+	DQ893571|COL1A1|1277|collagen, type I, alpha 1##EU176569|COL1A1|1277|collagen, type I, alpha 1##M36546|COL1A1|1277|collagen, type I, alpha 1##X07884|COL1A1|1277|collagen, type I, alpha 1##AB209597|COL1A1|1277|collagen, type I, alpha 1##BC036531|COL1A1|1277|collagen, type I, alpha 1##Z74615|COL1A1|1277|collagen, type I, alpha 1##NM_000088|COL1A1|1277|collagen, type I, alpha 1##AY358204|TMEM92|162461|transmembrane protein 92##NM_001168215|TMEM92|162461|transmembrane protein 92	0.0	
chr6	63982401	63982574	reg1026619.p2	5.292	+	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	-986486	-	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	-5694808	-	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	-6800072	+	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	47377	-	TSC_hg19_v1_chr6_+_64231650 CR749458	249168	+	TSC_hg19_v1_chr6_+_64281913 BC045571 NM_003463	299429	+	AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	0.0	
chr8	120082878	120082986	reg1025973.p2	5.292	+	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	-3463	+	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	-118712	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	-448725	-	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	137707	+	NM_002514 AK294289 AK312355 TSC_hg19_v1_chr8_+_120428685 AY082381 X96584 BC015028 CU677181 AB463923 DQ891179 DQ894361 CR457432	345729	+	EU131011 DQ891628 DQ894819 D45421 L35594 AK315253 BC034961 TSC_hg19_v1_chr8_-_120651080 NM_001040092 NM_001130863 NM_006209	568130	-	AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_002514|NOV|4856|nephroblastoma overexpressed gene##AK294289|NOV|4856|nephroblastoma overexpressed gene##AK312355|NOV|4856|nephroblastoma overexpressed gene##AY082381|NOV|4856|nephroblastoma overexpressed gene##X96584|NOV|4856|nephroblastoma overexpressed gene##BC015028|NOV|4856|nephroblastoma overexpressed gene##DQ891179|NOV|4856|nephroblastoma overexpressed gene##DQ894361|NOV|4856|nephroblastoma overexpressed gene##CR457432|NOV|4856|nephroblastoma overexpressed gene##EU131011|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ891628|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ894819|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##D45421|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##L35594|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##AK315253|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC034961|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001040092|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001130863|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_006209|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2	0.879568	CTCF.p2:-13:0.880
chr17	44953932	44954028	reg1025608.p1	5.291	+	AY358217 AK127615 AB063483 NM_003396 BC064534 AB590853	-25006	+	AB464356 AB067628 BC114219 BC112116 BC112118 AY009397 NM_030753	-57959	-	NM_006178 AF135168 AF102846 AK294001 AK294727 AK294886 AK299786 BC030613 AK226078 AK290204 AK316057 U03985	-285903	+	TSC_hg19_v1_chr17_+_45000492 NM_001012511 NM_004287 NM_054022	46507	+	TSC_hg19_v1_chr17_+_45000525 AK303650 AK290890 BC009710 AF229796 BC034762 CU679451 AF007548 DQ891461 DQ894638	46565	+	BC108690 BC033942 NM_203400	102620	-	AY358217|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AK127615|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AB063483|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_003396|WNT9B|7484|wingless-type MMTV integration site family, member 9B##BC064534|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AB067628|WNT3|7473|wingless-type MMTV integration site family, member 3##BC114219|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112116|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112118|WNT3|7473|wingless-type MMTV integration site family, member 3##AY009397|WNT3|7473|wingless-type MMTV integration site family, member 3##NM_030753|WNT3|7473|wingless-type MMTV integration site family, member 3##NM_006178|NSF|4905|N-ethylmaleimide-sensitive factor##AF135168|NSF|4905|N-ethylmaleimide-sensitive factor##AF102846|NSF|4905|N-ethylmaleimide-sensitive factor##AK294001|NSF|4905|N-ethylmaleimide-sensitive factor##AK294727|NSF|4905|N-ethylmaleimide-sensitive factor##AK294886|NSF|4905|N-ethylmaleimide-sensitive factor##AK299786|NSF|4905|N-ethylmaleimide-sensitive factor##BC030613|NSF|4905|N-ethylmaleimide-sensitive factor##AK226078|NSF|4905|N-ethylmaleimide-sensitive factor##AK290204|NSF|4905|N-ethylmaleimide-sensitive factor##AK316057|NSF|4905|N-ethylmaleimide-sensitive factor##U03985|NSF|4905|N-ethylmaleimide-sensitive factor##NM_001012511|GOSR2|9570|golgi SNAP receptor complex member 2##NM_004287|GOSR2|9570|golgi SNAP receptor complex member 2##NM_054022|GOSR2|9570|golgi SNAP receptor complex member 2##AK290890|GOSR2|9570|golgi SNAP receptor complex member 2##BC009710|GOSR2|9570|golgi SNAP receptor complex member 2##AF229796|GOSR2|9570|golgi SNAP receptor complex member 2##BC034762|GOSR2|9570|golgi SNAP receptor complex member 2##AF007548|GOSR2|9570|golgi SNAP receptor complex member 2##DQ891461|GOSR2|9570|golgi SNAP receptor complex member 2##DQ894638|GOSR2|9570|golgi SNAP receptor complex member 2##BC108690|RPRML|388394|reprimo-like##BC033942|RPRML|388394|reprimo-like##NM_203400|RPRML|388394|reprimo-like	0.189667	
chr7	13319643	13319753	reg1024649.p1	5.291	+	TSC_hg19_v1_chr7_+_12727257 AK313233 U73960	-592452	+	NM_001195396 NM_005738	-592788	+	TSC_hg19_v1_chr7_+_12726499 NM_001037164 NM_212460 BC039123 BC001111 BC003027	-593212	+	AK293802 AK311134 AK311194 CR627389 AK294572 AK311707 AK316007 AK299693 NM_001163150 NM_001163151 NM_001163152	706284	-	TSC_hg19_v1_chr7_-_14029292 AB209202 BC098403 AK312863	709606	-	NM_001163147 NM_004956	709943	-	AK313233|ARL4A|10124|ADP-ribosylation factor-like 4A##U73960|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_001195396|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_005738|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_001037164|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_212460|ARL4A|10124|ADP-ribosylation factor-like 4A##BC039123|ARL4A|10124|ADP-ribosylation factor-like 4A##BC001111|ARL4A|10124|ADP-ribosylation factor-like 4A##BC003027|ARL4A|10124|ADP-ribosylation factor-like 4A##AK293802|ETV1|2115|ets variant 1##AK311134|ETV1|2115|ets variant 1##AK311194|ETV1|2115|ets variant 1##CR627389|ETV1|2115|ets variant 1##AK294572|ETV1|2115|ets variant 1##AK311707|ETV1|2115|ets variant 1##AK316007|ETV1|2115|ets variant 1##AK299693|ETV1|2115|ets variant 1##NM_001163150|ETV1|2115|ets variant 1##NM_001163151|ETV1|2115|ets variant 1##NM_001163152|ETV1|2115|ets variant 1##AB209202|ETV1|2115|ets variant 1##BC098403|ETV1|2115|ets variant 1##AK312863|ETV1|2115|ets variant 1##NM_001163147|ETV1|2115|ets variant 1##NM_004956|ETV1|2115|ets variant 1	0.97724	CTCF.p2:-29:0.977
chr10	49493855	49494033	reg1026455.p2	5.290	+	CR749241 NM_001018071	-11018	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	-286123	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-666002	-	TSC_hg19_v1_chr10_+_49514722 AK292523	20842	+	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	115728	+	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	319143	-	CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AK292523|MAPK8|5599|mitogen-activated protein kinase 8##BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22	0.0	
chr1	101701258	101701405	reg1024432.p2	5.290	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-209898	+	BC003660 TSC_hg19_v1_chr1_-_101491341 AK125485 BC053857 AF132964 AF157319 AF248965 AK298181 AK225469 AK225707 AK225951 AK289351 NM_001077394 NM_001077395 NM_015958 AF161492	-209992	-	TSC_hg19_v1_chr1_+_101361700 AF233345 AB463270 AF529197 AM392927 AY094606	-339578	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	1050	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	1239	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	761156	-	AK125485|DPH5|51611|DPH5 homolog (S. cerevisiae)##BC053857|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF132964|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF157319|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF248965|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK298181|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225469|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225707|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225951|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK289351|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_001077394|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_001077395|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_015958|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF161492|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF233345|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AF529197|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AM392927|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AY094606|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3	0.0	
chr14	22771596	22771713	reg1026621.p1	5.290	+	AB463964 NM_001001912 AY726598	-638332	+	NM_001005466 AB529274 BC137371 BC137382	-668608	-	AB528817 NM_001005465	-732780	-	X58763 TSC_hg19_v1_chr14_+_22989364	217695	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	286432	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	286480	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.965597	CTCF.p2:17:0.966
chr17	63274577	63274682	reg1026421.p2	5.290	+	TSC_hg19_v1_chr17_+_63133501 AK309061 AK290535 BC022504 AK301719 AF071476 AK289876 AF493933 AY585191	-141050	+	NM_001081955 NM_001165933 NM_003835 TSC_hg19_v1_chr17_+_63133479	-141159	+	TSC_hg19_v1_chr17_-_63052903 AK301699 NM_006572	-221728	-	BC006295 TSC_hg19_v1_chr17_-_63556453	281846	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	283050	-	CR933657 TSC_hg19_v1_chr17_-_63557767	283139	-	AK309061|RGS9|8787|regulator of G-protein signaling 9##AK290535|RGS9|8787|regulator of G-protein signaling 9##BC022504|RGS9|8787|regulator of G-protein signaling 9##AK301719|RGS9|8787|regulator of G-protein signaling 9##AF071476|RGS9|8787|regulator of G-protein signaling 9##AK289876|RGS9|8787|regulator of G-protein signaling 9##AF493933|RGS9|8787|regulator of G-protein signaling 9##AY585191|RGS9|8787|regulator of G-protein signaling 9##NM_001081955|RGS9|8787|regulator of G-protein signaling 9##NM_001165933|RGS9|8787|regulator of G-protein signaling 9##NM_003835|RGS9|8787|regulator of G-protein signaling 9##AK301699|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_006572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC006295|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##CR933657|AXIN2|8313|axin 2	0.0	
chr20	55974822	55975002	reg1018183.p1	5.290	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-8455	+	NM_001190472	-40035	-	AK292247 AY349350 NM_001015885	-48311	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	125289	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	161245	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	220626	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.0	
chr22	50712949	50713026	reg1026483.p2	5.290	+	AF001008 CU013114 CU013402 AB463125 DQ891728 DQ894905 CR456514 U92268 AF001174 Y14440 AF031135 U53442 AK291845 BC027933 NM_002751 AK299745	-4231	-	CU677413 CU013115 CU013403 DQ892787 DQ896034 AB587470 X79483 AK308768 CR456515 BC015741 NM_002969 TSC_hg19_v1_chr22_-_50700113 Y10487	-12879	-	AK307421 TSC_hg19_v1_chr22_-_50699740 AK294422 BX640648 AK289770	-13248	-	TSC_hg19_v1_chr22_-_50720334 AK074932 AK126394	7361	-	TSC_hg19_v1_chr22_-_50720982 AK056543	7988	-	NM_012401	33013	-	AF001008|MAPK11|5600|mitogen-activated protein kinase 11##CU013114|MAPK11|5600|mitogen-activated protein kinase 11##CU013402|MAPK11|5600|mitogen-activated protein kinase 11##DQ891728|MAPK11|5600|mitogen-activated protein kinase 11##DQ894905|MAPK11|5600|mitogen-activated protein kinase 11##CR456514|MAPK11|5600|mitogen-activated protein kinase 11##U92268|MAPK11|5600|mitogen-activated protein kinase 11##AF001174|MAPK11|5600|mitogen-activated protein kinase 11##Y14440|MAPK11|5600|mitogen-activated protein kinase 11##AF031135|MAPK11|5600|mitogen-activated protein kinase 11##U53442|MAPK11|5600|mitogen-activated protein kinase 11##AK291845|MAPK11|5600|mitogen-activated protein kinase 11##BC027933|MAPK11|5600|mitogen-activated protein kinase 11##NM_002751|MAPK11|5600|mitogen-activated protein kinase 11##AK299745|MAPK11|5600|mitogen-activated protein kinase 11##CU013115|MAPK12|6300|mitogen-activated protein kinase 12##CU013403|MAPK12|6300|mitogen-activated protein kinase 12##DQ892787|MAPK12|6300|mitogen-activated protein kinase 12##DQ896034|MAPK12|6300|mitogen-activated protein kinase 12##X79483|MAPK12|6300|mitogen-activated protein kinase 12##AK308768|MAPK12|6300|mitogen-activated protein kinase 12##CR456515|MAPK12|6300|mitogen-activated protein kinase 12##BC015741|MAPK12|6300|mitogen-activated protein kinase 12##NM_002969|MAPK12|6300|mitogen-activated protein kinase 12##Y10487|MAPK12|6300|mitogen-activated protein kinase 12##AK307421|MAPK12|6300|mitogen-activated protein kinase 12##AK294422|MAPK12|6300|mitogen-activated protein kinase 12##BX640648|MAPK12|6300|mitogen-activated protein kinase 12##AK289770|MAPK12|6300|mitogen-activated protein kinase 12##AK074932|PLXNB2|23654|plexin B2##AK126394|PLXNB2|23654|plexin B2##AK056543|PLXNB2|23654|plexin B2##NM_012401|PLXNB2|23654|plexin B2	0.999412	CTCF.p2:32:0.999
chr3	15599038	15599144	reg1012174.p1	5.290	+	BC126363 BC144004 BC074828 BC074829 TSC_hg19_v1_chr3_-_15563197 AY150334 AY150335 AY150336 AY150337 AY150338 AY150339 AJ225895 AF057036 NM_005677 NM_080539 AK289688	-35873	-	AK128401 NM_080538	-58713	-	TSC_hg19_v1_chr3_+_15469073 NM_033083 AK312330 AK304697 BC041329 AF272973 CU691982	-129923	+	DQ895558 EU176367 AF161397 TSC_hg19_v1_chr3_-_15643040	43913	-	BC007440 TSC_hg19_v1_chr3_-_15643077 AJ131753 AK056977 AK299287 AK301546 AK302086 BC001627 AK301990 NM_012260	44005	-	AK297033 TSC_hg19_v1_chr3_+_15643251 NM_000060 AK313252 AK294301 U03274 BC012099 CU680214	44157	+	BC126363|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC144004|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC074828|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC074829|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150334|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150335|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150336|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150337|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150338|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150339|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AJ225895|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AF057036|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_005677|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080539|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AK289688|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_033083|EAF1|85403|ELL associated factor 1##AK312330|EAF1|85403|ELL associated factor 1##AK304697|EAF1|85403|ELL associated factor 1##BC041329|EAF1|85403|ELL associated factor 1##AF272973|EAF1|85403|ELL associated factor 1##DQ895558|HACL1|26061|2-hydroxyacyl-CoA lyase 1##EU176367|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AF161397|HACL1|26061|2-hydroxyacyl-CoA lyase 1##BC007440|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AJ131753|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK056977|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK301546|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK302086|HACL1|26061|2-hydroxyacyl-CoA lyase 1##BC001627|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK301990|HACL1|26061|2-hydroxyacyl-CoA lyase 1##NM_012260|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK297033|BTD|686|biotinidase##NM_000060|BTD|686|biotinidase##AK313252|BTD|686|biotinidase##AK294301|BTD|686|biotinidase##U03274|BTD|686|biotinidase##BC012099|BTD|686|biotinidase	0.97818	CTCF.p2:15:0.978
chr3	90408487	90408590	reg1025947.p2	5.290	+	M83941 AF213460 BC026247 TSC_hg19_v1_chr3_+_89156840 AK291411 AB384708	-1251688	+	AF213459 NM_005233 NM_182644 BC063282 TSC_hg19_v1_chr3_+_89156770	-1251817	+	AL832398 NM_173824 TSC_hg19_v1_chr3_+_88199126 BC024188 AK297719 AK313547	-2209510	+	AB590252 DQ892389 DQ895602 TSC_hg19_v1_chr3_-_93692741 Y00692 AK292994	3284138	-	TSC_hg19_v1_chr3_-_93692932 BC015801 NM_000313	3284380	-	TSC_hg19_v1_chr3_+_93698998 BC073842 NM_001174150 NM_001174151 NM_144996 NM_182896 CR936753 BC094725 BC104033 BC104034 BC104035 BC104036 AK299284 BC031093 AK296994 BC062993 BC015439 CR936763 AL713789 CR936756	3290489	+	M83941|EPHA3|2042|EPH receptor A3##AF213460|EPHA3|2042|EPH receptor A3##BC026247|EPHA3|2042|EPH receptor A3##AK291411|EPHA3|2042|EPH receptor A3##AF213459|EPHA3|2042|EPH receptor A3##NM_005233|EPHA3|2042|EPH receptor A3##NM_182644|EPHA3|2042|EPH receptor A3##BC063282|EPHA3|2042|EPH receptor A3##AL832398|C3orf38|285237|chromosome 3 open reading frame 38##NM_173824|C3orf38|285237|chromosome 3 open reading frame 38##BC024188|C3orf38|285237|chromosome 3 open reading frame 38##AK297719|C3orf38|285237|chromosome 3 open reading frame 38##AK313547|C3orf38|285237|chromosome 3 open reading frame 38##DQ892389|PROS1|5627|protein S (alpha)##DQ895602|PROS1|5627|protein S (alpha)##Y00692|PROS1|5627|protein S (alpha)##AK292994|PROS1|5627|protein S (alpha)##BC015801|PROS1|5627|protein S (alpha)##NM_000313|PROS1|5627|protein S (alpha)##BC073842|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174150|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174151|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_144996|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_182896|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936753|ARL13B|200894|ADP-ribosylation factor-like 13B##BC094725|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104033|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104034|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104035|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104036|ARL13B|200894|ADP-ribosylation factor-like 13B##AK299284|ARL13B|200894|ADP-ribosylation factor-like 13B##BC031093|ARL13B|200894|ADP-ribosylation factor-like 13B##AK296994|ARL13B|200894|ADP-ribosylation factor-like 13B##BC062993|ARL13B|200894|ADP-ribosylation factor-like 13B##BC015439|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936763|ARL13B|200894|ADP-ribosylation factor-like 13B##AL713789|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936756|ARL13B|200894|ADP-ribosylation factor-like 13B	0.0	
chr7	66197485	66197633	reg1021615.p1	5.290	+	TSC_hg19_v1_chr7_+_66147121 AK056864	-50419	+	BC042482 TSC_hg19_v1_chr7_+_66093944 AK056631 AK127790	-103617	+	TSC_hg19_v1_chr7_+_66093867 NM_001167961 NM_153033	-103685	+	NM_014504 TSC_hg19_v1_chr7_+_66205645	8085	+	TSC_hg19_v1_chr7_+_66205692 BC015330	8135	+	TSC_hg19_v1_chr7_+_66205719 AJ250042 AK223329 AK290678	8171	+	AK056864|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##BC042482|KCTD7|154881|potassium channel tetramerisation domain containing 7##AK056631|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_001167961|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_153033|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_014504|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##BC015330|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AJ250042|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK223329|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK290678|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1	0.0	
chr8	57837920	57838043	reg1027896.p2	5.290	+	BC107706 TSC_hg19_v1_chr8_-_57359201 AK309758 AK314908 NM_001135690	-478752	-	CR541808 CR541828 DQ890865 DQ890871 DQ894027 BC032505 NM_006211	-479430	-	TSC_hg19_v1_chr8_+_57358383 AK091563 AX747062	-479609	+	AY032885 TSC_hg19_v1_chr8_-_57906227	68275	-	TSC_hg19_v1_chr8_-_57906381 BC017797	68397	-	BC067814 TSC_hg19_v1_chr8_-_57906402	68421	-	BC107706|PENK|5179|proenkephalin##AK314908|PENK|5179|proenkephalin##NM_001135690|PENK|5179|proenkephalin##CR541808|PENK|5179|proenkephalin##CR541828|PENK|5179|proenkephalin##DQ890865|PENK|5179|proenkephalin##DQ890871|PENK|5179|proenkephalin##DQ894027|PENK|5179|proenkephalin##BC032505|PENK|5179|proenkephalin##NM_006211|PENK|5179|proenkephalin##AY032885|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1	0.0	
chr9	119672666	119672825	reg1027482.p2	5.290	+	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	-223139	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	-223283	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	-756675	+	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	504568	-	TSC_hg19_v1_chr9_-_120177336 BX649176	504589	-	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	793719	+	NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2##BX649176|ASTN2|23245|astrotactin 2##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4	0.761179	CTCF.p2:-61:0.761
chr2	139680695	139680816	reg1027197.p1	5.289	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-142949	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-421265	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-421362	+	TSC_hg19_v1_chr2_-_142888540 AK054663	3207801	-	AF176832 NM_018557	3208514	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	3954451	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.992504	CTCF.p2:-23:0.993
chr6	109718401	109718500	reg1028348.p2	5.289	+	TSC_hg19_v1_chr6_-_109703704 NM_001142401 NM_001142402 NM_001142403 NM_001142404 NM_006016	-14705	-	TSC_hg19_v1_chr6_-_109703671 AK307193 AK312357 AK301692	-14778	-	TSC_hg19_v1_chr6_-_109703643 BC011522 AF299342 AF299343 D14043	-14812	-	TSC_hg19_v1_chr6_-_109761830 AK293674 BC038716 AK315790 BC026359 BC026360	43487	-	TSC_hg19_v1_chr6_+_109761901 AK310148 AK313515 NM_003080 AJ222801	43493	+	TSC_hg19_v1_chr6_+_109762043 BC000038	43600	+	NM_001142401|CD164|8763|CD164 molecule, sialomucin##NM_001142402|CD164|8763|CD164 molecule, sialomucin##NM_001142403|CD164|8763|CD164 molecule, sialomucin##NM_001142404|CD164|8763|CD164 molecule, sialomucin##NM_006016|CD164|8763|CD164 molecule, sialomucin##AK312357|CD164|8763|CD164 molecule, sialomucin##AK301692|CD164|8763|CD164 molecule, sialomucin##BC011522|CD164|8763|CD164 molecule, sialomucin##AF299342|CD164|8763|CD164 molecule, sialomucin##AF299343|CD164|8763|CD164 molecule, sialomucin##D14043|CD164|8763|CD164 molecule, sialomucin##AK293674|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##BC038716|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##AK315790|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##BC026359|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##BC026360|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##AK310148|SMPD2|6610|sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)##AK313515|SMPD2|6610|sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)##NM_003080|SMPD2|6610|sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)##AJ222801|SMPD2|6610|sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)##BC000038|SMPD2|6610|sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)	0.023668	
chr9	1942126	1942284	reg1026822.p2	5.289	+	AF130729 NM_181872	-891596	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-891835	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-891861	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	73091	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	679602	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	679869	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.0	
chr1	29211557	29211691	reg1025523.p2	5.288	+	NM_000911 U07882	-72971	+	TSC_hg19_v1_chr1_+_29063503 AK303833 NM_001172828 AF432214 AF155095 AF192968 DQ892157 DQ895352 CU678040 AB451335 AB451484	-148087	+	NM_001173128 NM_016258 BC002559 AK292581 TSC_hg19_v1_chr1_+_29063435	-148341	+	TSC_hg19_v1_chr1_+_29213611 AB209649 NM_001166005 NM_001166007 NM_004437 NM_203342 NM_203343	1967	+	TSC_hg19_v1_chr1_+_29213624 M14993 M61733 J03796	2033	+	TSC_hg19_v1_chr1_+_29241080 NM_001166006 BC039079 AK310655	29457	+	NM_000911|OPRD1|4985|opioid receptor, delta 1##U07882|OPRD1|4985|opioid receptor, delta 1##AK303833|YTHDF2|51441|YTH domain family, member 2##NM_001172828|YTHDF2|51441|YTH domain family, member 2##AF432214|YTHDF2|51441|YTH domain family, member 2##AF155095|YTHDF2|51441|YTH domain family, member 2##AF192968|YTHDF2|51441|YTH domain family, member 2##DQ892157|YTHDF2|51441|YTH domain family, member 2##DQ895352|YTHDF2|51441|YTH domain family, member 2##AB451335|YTHDF2|51441|YTH domain family, member 2##AB451484|YTHDF2|51441|YTH domain family, member 2##NM_001173128|YTHDF2|51441|YTH domain family, member 2##NM_016258|YTHDF2|51441|YTH domain family, member 2##BC002559|YTHDF2|51441|YTH domain family, member 2##AK292581|YTHDF2|51441|YTH domain family, member 2##AB209649|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166005|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166007|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_004437|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203342|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203343|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M14993|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M61733|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##J03796|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	0.0	
chr14	76964247	76964340	reg1022099.p1	5.288	+	NM_004452	-126604	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-345987	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-346016	+	TSC_hg19_v1_chr14_+_77227817 AK094330	263507	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	264162	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	264759	+	NM_004452|ESRRB|2103|estrogen-related receptor beta##AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1	0.938289	CTCF.p2:30:0.764
chr16	53317384	53317514	reg1027095.p2	5.288	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	-152389	+	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	-184350	+	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	-228568	+	NM_001207030	87591	-	TSC_hg19_v1_chr16_+_53468350 NM_005611	150903	+	TSC_hg19_v1_chr16_+_53468362 BC034490	150914	+	DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_001207030|LOC643802|643802|u3 small nucleolar ribonucleoprotein protein MPP10-like##NM_005611|RBL2|5934|retinoblastoma-like 2 (p130)##BC034490|RBL2|5934|retinoblastoma-like 2 (p130)	0.520718	CTCF.p2:-6:0.521
chr18	56219298	56219478	reg1022699.p1	5.288	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-330538	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-330585	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-330626	+	BX647796 NM_052947	76800	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	119253	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	119340	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.0	
chr2	121433234	121433364	reg1030753.p1	5.288	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-329502	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-422795	+	AK127675 AK304588 TSC_hg19_v1_chr2_+_121010450 M35416	-422855	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	121594	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	609474	-	TSC_hg19_v1_chr2_-_122159142 CR749627	725856	-	BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK127675|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK304588|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##M35416|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1	0.642002	CTCF.p2:-3:0.642
chr21	47238311	47238419	reg1025763.p1	5.288	+	TSC_hg19_v1_chr21_+_47063638 AK310131	-174736	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-276033	-	AK303168 NM_001205207	-283831	-	AF176329 NM_001130141 NM_020528 BC012061 AK310672	31523	+	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	163320	+	TSC_hg19_v1_chr21_+_47518062 NM_001849 NM_058174 NM_058175 BC065509	279685	+	AK310131|PCBP3|54039|poly(rC) binding protein 3##U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1##NM_001849|COL6A2|1292|collagen, type VI, alpha 2##NM_058174|COL6A2|1292|collagen, type VI, alpha 2##NM_058175|COL6A2|1292|collagen, type VI, alpha 2##BC065509|COL6A2|1292|collagen, type VI, alpha 2	0.0	
chr10	51382571	51382678	reg1027462.p1	5.287	+	DQ867088 BC033633 BC012005 BC052966 BC050560 AK293897 AK308656 AK311609 AK301845 BC051717 AK307788 AY575848 AK293735 AY258587 AY575849 EF382674 NM_003631 AK295786 AK294819 AK295244 AK302560	-11378	-	BC171820 BC171833 AF411132 NM_001077686	-136097	-	TSC_hg19_v1_chr10_-_50970341 AK296551 BC026320 AK225558 AK001713 AK303729 AK307759 NM_001143996 NM_001143997 NM_018245	-412252	-	NM_001077685	103702	-	AK312108 BC005257 NM_002443 NM_138634 S67815 M15885 U22178 U78976	166938	+	NM_001145260 NM_001145261 NM_001145263 TSC_hg19_v1_chr10_+_51565152 AK312325	182515	+	DQ867088|PARG|8505|poly (ADP-ribose) glycohydrolase##BC012005|PARG|8505|poly (ADP-ribose) glycohydrolase##BC052966|PARG|8505|poly (ADP-ribose) glycohydrolase##BC050560|PARG|8505|poly (ADP-ribose) glycohydrolase##AK293897|LOC728407|728407|poly (ADP-ribose) glycohydrolase pseudogene##AK311609|LOC728407|728407|poly (ADP-ribose) glycohydrolase pseudogene##AK301845|PARG|8505|poly (ADP-ribose) glycohydrolase##BC051717|AGAP8|728404|ArfGAP with GTPase domain, ankyrin repeat and PH domain 8##AY575848|PARG|8505|poly (ADP-ribose) glycohydrolase##AY258587|PARG|8505|poly (ADP-ribose) glycohydrolase##AY575849|PARG|8505|poly (ADP-ribose) glycohydrolase##EF382674|PARG|8505|poly (ADP-ribose) glycohydrolase##NM_003631|PARG|8505|poly (ADP-ribose) glycohydrolase##AK295786|PARG|8505|poly (ADP-ribose) glycohydrolase##AK294819|LOC728407|728407|poly (ADP-ribose) glycohydrolase pseudogene##AK295244|PARG|8505|poly (ADP-ribose) glycohydrolase##AK302560|PARG|8505|poly (ADP-ribose) glycohydrolase##BC171833|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##AF411132|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##NM_001077686|AGAP8|728404|ArfGAP with GTPase domain, ankyrin repeat and PH domain 8##AK296551|OGDHL|55753|oxoglutarate dehydrogenase-like##BC026320|OGDHL|55753|oxoglutarate dehydrogenase-like##AK225558|OGDHL|55753|oxoglutarate dehydrogenase-like##AK001713|OGDHL|55753|oxoglutarate dehydrogenase-like##AK303729|OGDHL|55753|oxoglutarate dehydrogenase-like##AK307759|OGDHL|55753|oxoglutarate dehydrogenase-like##NM_001143996|OGDHL|55753|oxoglutarate dehydrogenase-like##NM_001143997|OGDHL|55753|oxoglutarate dehydrogenase-like##NM_018245|OGDHL|55753|oxoglutarate dehydrogenase-like##NM_001077685|AGAP7|653268|ArfGAP with GTPase domain, ankyrin repeat and PH domain 7##AK312108|MSMB|4477|microseminoprotein, beta-##BC005257|MSMB|4477|microseminoprotein, beta-##NM_002443|MSMB|4477|microseminoprotein, beta-##NM_138634|MSMB|4477|microseminoprotein, beta-##S67815|MSMB|4477|microseminoprotein, beta-##M15885|MSMB|4477|microseminoprotein, beta-##U22178|MSMB|4477|microseminoprotein, beta-##U78976|MSMB|4477|microseminoprotein, beta-##NM_001145260|NCOA4|8031|nuclear receptor coactivator 4##NM_001145261|NCOA4|8031|nuclear receptor coactivator 4##NM_001145263|NCOA4|8031|nuclear receptor coactivator 4##AK312325|NCOA4|8031|nuclear receptor coactivator 4	0.999741	CTCF.p2:-16:1.000
chr11	117339815	117339915	reg1021812.p1	5.287	+	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-141034	+	TSC_hg19_v1_chr11_+_117198594 BX648682 NM_014956 BC054015	-141281	+	TSC_hg19_v1_chr11_-_117186973 AF324837 AB032975 AF201468 AF190725 BC036084 AK075049 BC065492 NM_012104 NM_138971 NM_138972 NM_138973	-152885	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	327988	-	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	328094	-	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	355569	-	AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##BX648682|CEP164|22897|centrosomal protein 164kDa##NM_014956|CEP164|22897|centrosomal protein 164kDa##BC054015|CEP164|22897|centrosomal protein 164kDa##AF324837|BACE1|23621|beta-site APP-cleaving enzyme 1##AB032975|BACE1|23621|beta-site APP-cleaving enzyme 1##AF201468|BACE1|23621|beta-site APP-cleaving enzyme 1##AF190725|BACE1|23621|beta-site APP-cleaving enzyme 1##BC036084|BACE1|23621|beta-site APP-cleaving enzyme 1##AK075049|BACE1|23621|beta-site APP-cleaving enzyme 1##BC065492|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_012104|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138971|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138972|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138973|BACE1|23621|beta-site APP-cleaving enzyme 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2	0.02634	
chr12	4636275	4636397	reg1020503.p2	5.287	+	BC121097 BC121098 NM_020996 X63454	-81557	-	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	-147536	-	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	-205945	+	TSC_hg19_v1_chr12_-_4647633 AJ272205 BC016908	11283	-	AL834377 NM_020374 TSC_hg19_v1_chr12_-_4647648	11310	-	TSC_hg19_v1_chr12_-_4647672 AK074479 BX641128	11332	-	BC121097|FGF6|2251|fibroblast growth factor 6##BC121098|FGF6|2251|fibroblast growth factor 6##NM_020996|FGF6|2251|fibroblast growth factor 6##X63454|FGF6|2251|fibroblast growth factor 6##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AJ272205|C12orf4|57102|chromosome 12 open reading frame 4##BC016908|C12orf4|57102|chromosome 12 open reading frame 4##AL834377|C12orf4|57102|chromosome 12 open reading frame 4##NM_020374|C12orf4|57102|chromosome 12 open reading frame 4##AK074479|C12orf4|57102|chromosome 12 open reading frame 4##BX641128|C12orf4|57102|chromosome 12 open reading frame 4	0.595552	CTCF.p2:-12:0.596
chr14	32713746	32713842	reg1027413.p1	5.287	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-167288	+	TSC_hg19_v1_chr14_+_32546223 BC075799	-167549	+	TSC_hg19_v1_chr14_+_32546174 BC050059	-167615	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	84742	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	694696	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	1706355	-	NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##BC050059|ARHGAP5|394|Rho GTPase activating protein 5##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)	0.011613	
chr19	17501973	17502081	reg1026343.p1	5.287	+	CU691156 TSC_hg19_v1_chr19_-_17488155 AF348827 BC050365 BC056414 NM_031310 AF326591 AL834363 AK096030 AK313837	-13895	-	NM_001128855 NM_032620 NM_133644 AF360742 AF360743 AY078987 AY078988 AK298485 AK027606 AK291929 BC019261 TSC_hg19_v1_chr19_+_17448396 BC017207 AK311442 AF360744 DQ892217 DQ895413 CU676414 CU677863	-53655	+	NM_001195422 AK297953	-56228	+	CU689786 D28137 NM_004335 AK223124 AK291099 AK303593 TSC_hg19_v1_chr19_-_17516428 BC033873	14392	-	AK311380 AK055623 TSC_hg19_v1_chr19_+_17516630	14539	+	TSC_hg19_v1_chr19_+_17530855 AK057057 AK289487	28821	+	AF348827|PLVAP|83483|plasmalemma vesicle associated protein##BC050365|PLVAP|83483|plasmalemma vesicle associated protein##BC056414|PLVAP|83483|plasmalemma vesicle associated protein##NM_031310|PLVAP|83483|plasmalemma vesicle associated protein##AF326591|PLVAP|83483|plasmalemma vesicle associated protein##AL834363|PLVAP|83483|plasmalemma vesicle associated protein##AK096030|PLVAP|83483|plasmalemma vesicle associated protein##AK313837|PLVAP|83483|plasmalemma vesicle associated protein##NM_001128855|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_032620|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_133644|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360742|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360743|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AY078987|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AY078988|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK298485|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK027606|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK291929|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC019261|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC017207|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK311442|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360744|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##DQ892217|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##DQ895413|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_001195422|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK297953|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##D28137|BST2|684|bone marrow stromal cell antigen 2##NM_004335|BST2|684|bone marrow stromal cell antigen 2##AK223124|BST2|684|bone marrow stromal cell antigen 2##AK291099|BST2|684|bone marrow stromal cell antigen 2##AK303593|BST2|684|bone marrow stromal cell antigen 2##BC033873|BST2|684|bone marrow stromal cell antigen 2##AK311380|LOC100507535|100507535|uncharacterized LOC100507535##AK055623|LOC100507535|100507535|uncharacterized LOC100507535##AK057057|FAM125A|93343|family with sequence similarity 125, member A##AK289487|FAM125A|93343|family with sequence similarity 125, member A	0.0	
chr2	208599134	208599234	reg1025591.p1	5.287	+	TSC_hg19_v1_chr2_+_208576466 BC067253	-22684	+	TSC_hg19_v1_chr2_+_208576365 BC047293	-22789	+	TSC_hg19_v1_chr2_+_208576363 AK097751 NM_001142300 NM_152523	-22883	+	U43318 AB043702 NM_003468	34912	-	TSC_hg19_v1_chr2_-_208890252 BX648983 NM_001080475	291080	-	HQ258094 U66583 BC117338 BC117340 NM_006891	390012	-	BC067253|CCNYL1|151195|cyclin Y-like 1##BC047293|CCNYL1|151195|cyclin Y-like 1##AK097751|CCNYL1|151195|cyclin Y-like 1##NM_001142300|CCNYL1|151195|cyclin Y-like 1##NM_152523|CCNYL1|151195|cyclin Y-like 1##U43318|FZD5|7855|frizzled family receptor 5##AB043702|FZD5|7855|frizzled family receptor 5##NM_003468|FZD5|7855|frizzled family receptor 5##BX648983|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##NM_001080475|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##HQ258094|CRYGD|1421|crystallin, gamma D##U66583|CRYGD|1421|crystallin, gamma D##BC117338|CRYGD|1421|crystallin, gamma D##BC117340|CRYGD|1421|crystallin, gamma D##NM_006891|CRYGD|1421|crystallin, gamma D	0.026492	
chr4	178588997	178589103	reg1024642.p1	5.287	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-225407	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-225457	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-225509	-	TSC_hg19_v1_chr4_+_183065111 AK308489	4476075	+	NM_001080477 HE578284 HE578285	4656104	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	5249480	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.0	
chr7	123134395	123134492	reg1027169.p1	5.287	+	AB528233 AK026413 AK314537 AF260824 BC111775 NM_022444	-294432	-	BC095524 NM_016945	-498690	-	TSC_hg19_v1_chr7_-_122526793 NM_001009571 NM_001167940 NM_017954	-607647	-	BC091520 BC128181 BC128182 AK093153 AX747958 BC032838 BC068607 NM_178827	40201	-	CR933664 BT006695 TSC_hg19_v1_chr7_-_123197862 AK022209 BC020821 BC070236 BC070237 U64028 AK315458 U53468 BC000813 NM_005000	63447	-	AF428257 BC100874 BC100875 BC100876 BC100877 NM_080928	114650	+	AK026413|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AK314537|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##AF260824|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##BC111775|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##NM_022444|SLC13A1|6561|solute carrier family 13 (sodium/sulfate symporters), member 1##BC095524|TAS2R16|50833|taste receptor, type 2, member 16##NM_016945|TAS2R16|50833|taste receptor, type 2, member 16##NM_001009571|CADPS2|93664|Ca++-dependent secretion activator 2##NM_001167940|CADPS2|93664|Ca++-dependent secretion activator 2##NM_017954|CADPS2|93664|Ca++-dependent secretion activator 2##BC091520|IQUB|154865|IQ motif and ubiquitin domain containing##BC128181|IQUB|154865|IQ motif and ubiquitin domain containing##BC128182|IQUB|154865|IQ motif and ubiquitin domain containing##AK093153|IQUB|154865|IQ motif and ubiquitin domain containing##BC032838|IQUB|154865|IQ motif and ubiquitin domain containing##BC068607|IQUB|154865|IQ motif and ubiquitin domain containing##NM_178827|IQUB|154865|IQ motif and ubiquitin domain containing##CR933664|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BT006695|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK022209|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC020821|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070236|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC070237|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U64028|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AK315458|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##U53468|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##BC000813|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##NM_005000|NDUFA5|4698|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa##AF428257|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100874|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100875|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100876|ASB15|142685|ankyrin repeat and SOCS box containing 15##BC100877|ASB15|142685|ankyrin repeat and SOCS box containing 15##NM_080928|ASB15|142685|ankyrin repeat and SOCS box containing 15	0.998221	CTCF.p2:-5:0.998
chr7	37873162	37873244	reg1007256.p1	5.287	+	AB529245 AY288420 BC120951 BC120952 NM_181791	-93208	+	BC043356 TSC_hg19_v1_chr7_+_37723380	-149821	+	NM_001206480	-384309	-	BC036816 NM_016616	14995	+	AF026692 BC047684 BC058911 AK313029 TSC_hg19_v1_chr7_-_37956420 AK303977 AK302357	83208	-	TSC_hg19_v1_chr7_-_37956526 BC032828 NM_003014	83317	-	AY288420|GPR141|353345|G protein-coupled receptor 141##BC120951|GPR141|353345|G protein-coupled receptor 141##BC120952|GPR141|353345|G protein-coupled receptor 141##NM_181791|GPR141|353345|G protein-coupled receptor 141##NM_001206480|ELMO1|9844|engulfment and cell motility 1##BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##AF026692|SFRP4|6424|secreted frizzled-related protein 4##BC047684|SFRP4|6424|secreted frizzled-related protein 4##BC058911|SFRP4|6424|secreted frizzled-related protein 4##AK313029|SFRP4|6424|secreted frizzled-related protein 4##AK303977|SFRP4|6424|secreted frizzled-related protein 4##AK302357|SFRP4|6424|secreted frizzled-related protein 4##BC032828|SFRP4|6424|secreted frizzled-related protein 4##NM_003014|SFRP4|6424|secreted frizzled-related protein 4	0.0	
chr14	35451603	35451692	reg1024620.p2	5.286	+	AB032252 NM_013448 NM_182648	-106795	-	TSC_hg19_v1_chr14_-_35344546 AF161435	-107110	-	TSC_hg19_v1_chr14_-_35344525 BC108711	-107140	-	NM_001146282 NM_003136 TSC_hg19_v1_chr14_+_35452178 AK312853	496	+	TSC_hg19_v1_chr14_+_35452224 AK293319 AK300824 BC003389 BC000652 U51920	641	+	NM_001079519	62465	+	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##AF161435|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##BC108711|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##NM_001146282|SRP54|6729|signal recognition particle 54kDa##NM_003136|SRP54|6729|signal recognition particle 54kDa##AK312853|SRP54|6729|signal recognition particle 54kDa##AK293319|SRP54|6729|signal recognition particle 54kDa##AK300824|SRP54|6729|signal recognition particle 54kDa##BC003389|SRP54|6729|signal recognition particle 54kDa##BC000652|SRP54|6729|signal recognition particle 54kDa##U51920|SRP54|6729|signal recognition particle 54kDa##NM_001079519|FAM177A1|283635|family with sequence similarity 177, member A1	0.0	
chr16	31369286	31369408	reg1025114.p1	5.286	+	TSC_hg19_v1_chr16_+_31366549 BC037577 BC038237 DQ892486 DQ895697	-2796	+	TSC_hg19_v1_chr16_+_31366521 M81695	-2825	+	TSC_hg19_v1_chr16_+_31366508 AK296666 AK309642 NM_000887	-2855	+	AK097160 AB208945 NM_005353 AK301028 AB384792 U37028	35291	+	DQ890561 DQ893723 M83308 BC029818 NM_005205	70352	-	AK096248 NM_001136509	84999	-	BC037577|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##BC038237|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ892486|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ895697|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##M81695|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##AK296666|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##AK309642|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##NM_000887|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##AK097160|ITGAD|3681|integrin, alpha D##AB208945|ITGAD|3681|integrin, alpha D##NM_005353|ITGAD|3681|integrin, alpha D##AK301028|ITGAD|3681|integrin, alpha D##U37028|ITGAD|3681|integrin, alpha D##DQ890561|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##DQ893723|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##M83308|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##BC029818|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##NM_005205|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##AK096248|ZNF843|283933|zinc finger protein 843##NM_001136509|ZNF843|283933|zinc finger protein 843	0.011062	
chr19	42620576	42620706	reg1030197.p1	5.286	+	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	-40275	+	TSC_hg19_v1_chr19_+_42580286 NM_022752	-40359	+	S40369 AJ249209 BC131717 NM_002088	-50703	-	M36718 X13809 BT007438 AB590941 TSC_hg19_v1_chr19_-_42636564 BC006101 M36653 NM_001207025 NM_001207026 NM_001247994 NM_002698 X53468	15950	-	TSC_hg19_v1_chr19_-_42721830 BC027930 NM_133328 AY125488 BC013372 AK307895 AK130203 AK075328	101198	-	TSC_hg19_v1_chr19_+_42724463 AK298895 AB075831 NM_133444	103823	+	AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574##NM_022752|ZNF574|64763|zinc finger protein 574##S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##M36718|POU2F2|5452|POU class 2 homeobox 2##X13809|POU2F2|5452|POU class 2 homeobox 2##BT007438|POU2F2|5452|POU class 2 homeobox 2##BC006101|POU2F2|5452|POU class 2 homeobox 2##M36653|POU2F2|5452|POU class 2 homeobox 2##NM_001207025|POU2F2|5452|POU class 2 homeobox 2##NM_001207026|POU2F2|5452|POU class 2 homeobox 2##NM_001247994|POU2F2|5452|POU class 2 homeobox 2##NM_002698|POU2F2|5452|POU class 2 homeobox 2##X53468|POU2F2|5452|POU class 2 homeobox 2##BC027930|DEDD2|162989|death effector domain containing 2##NM_133328|DEDD2|162989|death effector domain containing 2##AY125488|DEDD2|162989|death effector domain containing 2##BC013372|DEDD2|162989|death effector domain containing 2##AK307895|DEDD2|162989|death effector domain containing 2##AK130203|DEDD2|162989|death effector domain containing 2##AK075328|DEDD2|162989|death effector domain containing 2##AK298895|ZNF526|116115|zinc finger protein 526##AB075831|ZNF526|116115|zinc finger protein 526##NM_133444|ZNF526|116115|zinc finger protein 526	0.330687	CTCF.p2:-6:0.331
chr2	232791599	232791779	reg1002938.p4	5.286	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	-656	-	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-140573	+	TSC_hg19_v1_chr2_+_232646442 AK307486	-145252	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	34671	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	451694	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	479887	+	BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK307486|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2	0.0	
chr5	141142525	141142647	reg1026791.p1	5.286	+	TSC_hg19_v1_chr5_-_141061801 NM_022481	-80769	-	AJ310567 TSC_hg19_v1_chr5_-_141061794 AK091385 AX746950 AK290052	-80814	-	TSC_hg19_v1_chr5_-_141030986 AY217346 NM_033449	-111603	-	CU690208 TSC_hg19_v1_chr5_-_141257848	115253	-	BC035812 NM_002587 NM_032420 BC051287 BC075821 TSC_hg19_v1_chr5_-_141257976 AK289512	115373	-	TSC_hg19_v1_chr5_+_141303403 NM_001142603 NM_014773 BC007855 D50931 AK292869	160823	+	NM_022481|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AJ310567|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK091385|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK290052|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AY217346|FCHSD1|89848|FCH and double SH3 domains 1##NM_033449|FCHSD1|89848|FCH and double SH3 domains 1##BC035812|PCDH1|5097|protocadherin 1##NM_002587|PCDH1|5097|protocadherin 1##NM_032420|PCDH1|5097|protocadherin 1##BC051287|PCDH1|5097|protocadherin 1##BC075821|PCDH1|5097|protocadherin 1##AK289512|PCDH1|5097|protocadherin 1##NM_001142603|KIAA0141|9812|KIAA0141##NM_014773|KIAA0141|9812|KIAA0141##BC007855|KIAA0141|9812|KIAA0141##D50931|KIAA0141|9812|KIAA0141##AK292869|KIAA0141|9812|KIAA0141	0.081375	
chrX	52004541	52004622	reg1005996.p1	5.286	+	NM_001242362 NM_030801 NM_177535 NM_177537 AB058762 BC001207 AK098830 AK289458 AK308365 AB040527 AB040528 AB040529 NM_001098800 AL136582 BC081566 BC063838	-76604	+	BC063838 BC081566 AL136582 AB040527 AB040528 AB040529 NM_001098800 AK098830 AK289458 AK308365 BC001207 AB058762 NM_001242362 NM_030801 NM_177535 NM_177537	-192273	-	TSC_hg19_v1_chrX_+_51636723 NM_001005333 NM_006986 AF258554 AK298574 AK308706 BC014070 AK314053 AK074092 AF217963 AF300328	-367878	+	NM_130777 BC066311 BC009232 AJ318880	107546	+	AB590383 DQ893147 DQ896442 NM_001079538	108576	+	NM_001097592 NM_001097594 NM_001097597 NM_001097604 NM_020411 AF251237 NM_001097593 NM_001097596 NM_001097598 NM_001097605 NM_133430 AJ290447 AJ318879 AJ318878	234332	+	NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B##NM_030801|MAGED4B|81557|melanoma antigen family D, 4B##NM_177535|MAGED4B|81557|melanoma antigen family D, 4B##NM_177537|MAGED4B|81557|melanoma antigen family D, 4B##AB058762|MAGED4B|81557|melanoma antigen family D, 4B##BC001207|MAGED4B|81557|melanoma antigen family D, 4B##AK098830|MAGED4B|81557|melanoma antigen family D, 4B##AK289458|MAGED4B|81557|melanoma antigen family D, 4B##AK308365|MAGED4B|81557|melanoma antigen family D, 4B##AB040527|MAGED4B|81557|melanoma antigen family D, 4B##AB040528|MAGED4B|81557|melanoma antigen family D, 4B##AB040529|MAGED4B|81557|melanoma antigen family D, 4B##NM_001098800|MAGED4|728239|melanoma antigen family D, 4##AL136582|MAGED4B|81557|melanoma antigen family D, 4B##BC081566|MAGED4B|81557|melanoma antigen family D, 4B##BC063838|MAGED4B|81557|melanoma antigen family D, 4B##BC063838|MAGED4B|81557|melanoma antigen family D, 4B##BC081566|MAGED4B|81557|melanoma antigen family D, 4B##AL136582|MAGED4B|81557|melanoma antigen family D, 4B##AB040527|MAGED4B|81557|melanoma antigen family D, 4B##AB040528|MAGED4B|81557|melanoma antigen family D, 4B##AB040529|MAGED4B|81557|melanoma antigen family D, 4B##NM_001098800|MAGED4|728239|melanoma antigen family D, 4##AK098830|MAGED4B|81557|melanoma antigen family D, 4B##AK289458|MAGED4B|81557|melanoma antigen family D, 4B##AK308365|MAGED4B|81557|melanoma antigen family D, 4B##BC001207|MAGED4B|81557|melanoma antigen family D, 4B##AB058762|MAGED4B|81557|melanoma antigen family D, 4B##NM_001242362|MAGED4B|81557|melanoma antigen family D, 4B##NM_030801|MAGED4B|81557|melanoma antigen family D, 4B##NM_177535|MAGED4B|81557|melanoma antigen family D, 4B##NM_177537|MAGED4B|81557|melanoma antigen family D, 4B##NM_001005333|MAGED1|9500|melanoma antigen family D, 1##NM_006986|MAGED1|9500|melanoma antigen family D, 1##AF258554|MAGED1|9500|melanoma antigen family D, 1##AK298574|MAGED1|9500|melanoma antigen family D, 1##AK308706|MAGED1|9500|melanoma antigen family D, 1##BC014070|MAGED1|9500|melanoma antigen family D, 1##AK314053|MAGED1|9500|melanoma antigen family D, 1##AK074092|MAGED1|9500|melanoma antigen family D, 1##AF217963|MAGED1|9500|melanoma antigen family D, 1##AF300328|MAGED1|9500|melanoma antigen family D, 1##NM_130777|XAGE2|9502|X antigen family, member 2##BC066311|XAGE2|9502|X antigen family, member 2##BC009232|XAGE2|9502|X antigen family, member 2##AJ318880|XAGE2|9502|X antigen family, member 2##DQ893147|XAGE2|9502|X antigen family, member 2##DQ896442|XAGE2|9502|X antigen family, member 2##NM_001079538|XAGE2B|728242|X antigen family, member 2B##NM_001097592|XAGE1A|653219|X antigen family, member 1A##NM_001097594|XAGE1B|653220|X antigen family, member 1B##NM_001097597|XAGE1C|653048|X antigen family, member 1C##NM_001097604|XAGE1E|653067|X antigen family, member 1E##NM_020411|XAGE1D|9503|X antigen family, member 1D##AF251237|XAGE1D|9503|X antigen family, member 1D##NM_001097593|XAGE1A|653219|X antigen family, member 1A##NM_001097596|XAGE1B|653220|X antigen family, member 1B##NM_001097598|XAGE1C|653048|X antigen family, member 1C##NM_001097605|XAGE1E|653067|X antigen family, member 1E##NM_133430|XAGE1D|9503|X antigen family, member 1D##AJ290447|XAGE1D|9503|X antigen family, member 1D##AJ318879|XAGE1D|9503|X antigen family, member 1D##AJ318878|XAGE1D|9503|X antigen family, member 1D	0.0	
chr17	74554681	74554826	reg1027301.p1	5.285	+	TSC_hg19_v1_chr17_+_74553850 AK123993 AK129904 AB073602 BC042949 AK055935 BX647993 BC100293	-874	+	DQ390338 NM_001077620 BC146898 BC146904	-18607	+	AJ315162 AK098057 BC029798 AB057769 BC018822 NM_134268	-21051	-	TSC_hg19_v1_chr17_-_74581928 BT019972 BC040455 AJ251053 U14550	27152	-	TSC_hg19_v1_chr17_-_74581934 AK225943	27188	-	NM_006456 TSC_hg19_v1_chr17_-_74582222	27434	-	BC042949|LOC100507246|100507246|uncharacterized LOC100507246##BX647993|LOC100507246|100507246|uncharacterized LOC100507246##BC100293|LOC100507246|100507246|uncharacterized LOC100507246##DQ390338|PRCD|768206|progressive rod-cone degeneration##NM_001077620|PRCD|768206|progressive rod-cone degeneration##BC146898|PRCD|768206|progressive rod-cone degeneration##BC146904|PRCD|768206|progressive rod-cone degeneration##AJ315162|CYGB|114757|cytoglobin##AK098057|CYGB|114757|cytoglobin##BC029798|CYGB|114757|cytoglobin##AB057769|CYGB|114757|cytoglobin##NM_134268|CYGB|114757|cytoglobin##BT019972|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##BC040455|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##AJ251053|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##U14550|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##AK225943|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2##NM_006456|ST6GALNAC2|10610|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2	0.62126	CTCF.p2:15:0.621
chr2	62222733	62222914	reg1027919.p2	5.285	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-89994	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-107037	-	TSC_hg19_v1_chr2_-_62115733 BC106933 BC106934 AF026291	-107089	-	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	200443	+	BC047439 AK091902 AX747245 NM_198276	510716	-	AK292545 NM_001142615	678162	+	AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106933|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106934|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AF026291|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1	0.0	
chr5	90795909	90796071	reg1027096.p2	5.285	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-116858	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-119828	+	AK091866 TSC_hg19_v1_chr5_-_90610220	-185745	-	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	2120973	-	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	2122993	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	2124678	+	BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	0.968506	CTCF.p2:-42:0.969
chr1	234352109	234352259	reg1028009.p2	5.284	+	TSC_hg19_v1_chr1_+_234350005 BC037878	-2178	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-311572	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-602265	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	157188	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	262676	-	TSC_hg19_v1_chr1_-_234743489 BC020516	391342	-	BC037878|SLC35F3|148641|solute carrier family 35, member F3##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2	0.0	
chr12	58136002	58136104	reg1025615.p1	5.284	+	AF413077 BC028020 AK292672 AF384128 D79989 NM_014770	-155	-	AY128689 NM_001122772	-4025	-	TSC_hg19_v1_chr12_+_58120054 AK301303 BC069024 BC098453 BC039697 BC019026	-15985	+	AK315765 NM_005981 BX647402 TSC_hg19_v1_chr12_+_58138821 BC010377 U01160 AK294128 CR407647 DQ892877 DQ896127	2747	+	U79269 AK313701 Z48970 BC003644 BC010153 TSC_hg19_v1_chr12_-_58146082	10013	-	AK297901 TSC_hg19_v1_chr12_-_58146108	10055	-	AF413077|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##BC028020|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##AK292672|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##AF384128|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##D79989|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##NM_014770|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##AY128689|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##NM_001122772|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##AK301303|LOC100130776|100130776|uncharacterized LOC100130776##BC069024|LOC100130776|100130776|uncharacterized LOC100130776##BC039697|LOC100130776|100130776|uncharacterized LOC100130776##BC019026|LOC100130776|100130776|uncharacterized LOC100130776##AK315765|TSPAN31|6302|tetraspanin 31##NM_005981|TSPAN31|6302|tetraspanin 31##BX647402|TSPAN31|6302|tetraspanin 31##BC010377|TSPAN31|6302|tetraspanin 31##U01160|TSPAN31|6302|tetraspanin 31##AK294128|TSPAN31|6302|tetraspanin 31##CR407647|TSPAN31|6302|tetraspanin 31##DQ892877|TSPAN31|6302|tetraspanin 31##DQ896127|TSPAN31|6302|tetraspanin 31##U79269|CDK4|1019|cyclin-dependent kinase 4##AK313701|CDK4|1019|cyclin-dependent kinase 4##Z48970|CDK4|1019|cyclin-dependent kinase 4##BC003644|CDK4|1019|cyclin-dependent kinase 4##BC010153|CDK4|1019|cyclin-dependent kinase 4##AK297901|CDK4|1019|cyclin-dependent kinase 4	0.0	
chr13	97469727	97469833	reg1023004.p1	5.284	+	AF539426 NM_153456	-726688	+	CU688350 TSC_hg19_v1_chr13_-_96705666 BC125233 BC125234 AF227906 BC017759 BC067807 BC111021 AK001735 BC032302 NM_020121	-764130	-	TSC_hg19_v1_chr13_+_96329409 BC047936 BC020215 BC033823 AB384852 CU690538	-1140322	+	AK122639 NM_080818 AK313684	176832	-	TSC_hg19_v1_chr13_+_97794087 CR749802	324302	+	TSC_hg19_v1_chr13_+_97874586 AK074610 NM_144778 NM_207304 AK291727 AF061261 AF491866 BC032426 BC104038 BC104039 BC104040 AK315844	404815	+	AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##BC125233|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC125234|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF227906|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC017759|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC067807|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC111021|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AK001735|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC032302|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##NM_020121|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC047936|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##BC033823|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##AK122639|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##NM_080818|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AK313684|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_144778|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_207304|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK291727|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF061261|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF491866|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC032426|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104038|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104039|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104040|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK315844|MBNL2|10150|muscleblind-like 2 (Drosophila)	0.955662	CTCF.p2:19:0.956
chr3	125978420	125978539	reg1028777.p1	5.284	+	AF052732 BC027241 AK222535 AK222694 TSC_hg19_v1_chr3_-_125899430 AK294392 AK294530 AB209299 NM_012190	-79036	-	TSC_hg19_v1_chr3_-_125899364 AK307699 AK308112	-79107	-	NM_001164475 AK298070	-158085	-	TSC_hg19_v1_chr3_-_126076252 NM_014079 BC036733	97736	-	AK097402 NM_182628 TSC_hg19_v1_chr3_+_126113866	135344	+	TSC_hg19_v1_chr3_-_126194735 AY936556	216246	-	AF052732|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##BC027241|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222535|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222694|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294392|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294530|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AB209299|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##NM_012190|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK307699|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK308112|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##NM_001164475|SLC41A3|54946|solute carrier family 41, member 3##AK298070|SLC41A3|54946|solute carrier family 41, member 3##NM_014079|KLF15|28999|Kruppel-like factor 15##BC036733|KLF15|28999|Kruppel-like factor 15##AK097402|CCDC37|348807|coiled-coil domain containing 37##NM_182628|CCDC37|348807|coiled-coil domain containing 37##AY936556|ZXDC|79364|ZXD family zinc finger C	0.990727	CTCF.p2:0:0.991
chr3	127468688	127468783	reg1025934.p1	5.284	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-76918	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-120703	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-151451	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	72695	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	73407	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	165583	+	NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.396846	CTCF.p2:-28:0.209
chr5	6483981	6484136	reg1024622.p1	5.284	+	TSC_hg19_v1_chr5_+_6449114 AK057805	-34869	+	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	-35205	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	-105408	-	TSC_hg19_v1_chr5_-_6633158 AK291144 BC137083 AK298980	149096	-	TSC_hg19_v1_chr5_-_6633411 AK055456 AB255451 NM_001193455 NM_017755	149351	-	NM_001047 TSC_hg19_v1_chr5_+_6633508	149452	+	AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##AK291144|NSUN2|54888|NOP2/Sun domain family, member 2##BC137083|NSUN2|54888|NOP2/Sun domain family, member 2##AK298980|NSUN2|54888|NOP2/Sun domain family, member 2##AK055456|NSUN2|54888|NOP2/Sun domain family, member 2##AB255451|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001193455|NSUN2|54888|NOP2/Sun domain family, member 2##NM_017755|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001047|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)	0.0	
chrX	129527589	129527685	reg1026201.p1	5.284	+	AY288416 BC101166 BC101167 BC101168 AB529244 HQ258187 BC095502 BC126179 BC126181 NM_178471	-8172	-	TSC_hg19_v1_chrX_+_129473927 AK304649 AK297499 AK309433 AK296155 NM_003951 NM_022810 BC119666 BC119667 AF155809 AF155810 AF155811 AY358099	-53605	+	TSC_hg19_v1_chrX_-_129402874 AK000102 AL834333 AL133204 AK290373 BC051728 NM_017666	-124791	-	TSC_hg19_v1_chrX_+_129535955 BC003676 NM_016024 AK292855 BC105582 BC012345 AL050405 BC033750 BC063517 BC010036 BC040433 BC050707	8316	+	TSC_hg19_v1_chrX_-_130037184 BC108713 AL133207 AK289812 AK289837	509540	-	TSC_hg19_v1_chrX_-_130037207 AK000353 NM_006375 NM_182314	509569	-	AY288416|GPR119|139760|G protein-coupled receptor 119##BC101166|GPR119|139760|G protein-coupled receptor 119##BC101167|GPR119|139760|G protein-coupled receptor 119##BC101168|GPR119|139760|G protein-coupled receptor 119##HQ258187|GPR119|139760|G protein-coupled receptor 119##BC095502|GPR119|139760|G protein-coupled receptor 119##BC126179|GPR119|139760|G protein-coupled receptor 119##BC126181|GPR119|139760|G protein-coupled receptor 119##NM_178471|GPR119|139760|G protein-coupled receptor 119##AK297499|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AK309433|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AK296155|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##NM_003951|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##NM_022810|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##BC119666|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##BC119667|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155809|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155810|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AF155811|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AY358099|SLC25A14|9016|solute carrier family 25 (mitochondrial carrier, brain), member 14##AK000102|ZNF280C|55609|zinc finger protein 280C##AL834333|ZNF280C|55609|zinc finger protein 280C##AL133204|ZNF280C|55609|zinc finger protein 280C##AK290373|ZNF280C|55609|zinc finger protein 280C##BC051728|ZNF280C|55609|zinc finger protein 280C##NM_017666|ZNF280C|55609|zinc finger protein 280C##BC003676|RBMX2|51634|RNA binding motif protein, X-linked 2##NM_016024|RBMX2|51634|RNA binding motif protein, X-linked 2##AK292855|RBMX2|51634|RNA binding motif protein, X-linked 2##BC105582|RBMX2|51634|RNA binding motif protein, X-linked 2##BC012345|RBMX2|51634|RNA binding motif protein, X-linked 2##AL050405|RBMX2|51634|RNA binding motif protein, X-linked 2##BC033750|RBMX2|51634|RNA binding motif protein, X-linked 2##BC063517|RBMX2|51634|RNA binding motif protein, X-linked 2##BC010036|RBMX2|51634|RNA binding motif protein, X-linked 2##BC040433|RBMX2|51634|RNA binding motif protein, X-linked 2##BC050707|RBMX2|51634|RNA binding motif protein, X-linked 2##BC108713|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AL133207|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289812|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289837|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK000353|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_006375|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_182314|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2	0.985	CTCF.p2:-1:0.985
chr11	84893889	84893976	reg1026126.p2	5.283	+	U32376 AB209252 AK295094 NM_001364	-259482	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	-259700	-	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	-865551	-	CR749820 NM_001142699	444381	-	NM_001193537 NM_001193538 NM_018480 TSC_hg19_v1_chr11_+_85339636 AK298189 BC017574 BC107900 AF220193 AF246240 AK291150 BC038933 BC012065	445714	+	NM_001244735 NM_032273 AL136941 AK312081 BC007875	465071	+	U32376|DLG2|1740|discs, large homolog 2 (Drosophila)##AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)##AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##CR749820|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142699|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001193537|TMEM126B|55863|transmembrane protein 126B##NM_001193538|TMEM126B|55863|transmembrane protein 126B##NM_018480|TMEM126B|55863|transmembrane protein 126B##AK298189|TMEM126B|55863|transmembrane protein 126B##BC017574|TMEM126B|55863|transmembrane protein 126B##BC107900|TMEM126B|55863|transmembrane protein 126B##AF220193|TMEM126B|55863|transmembrane protein 126B##AF246240|TMEM126B|55863|transmembrane protein 126B##AK291150|TMEM126B|55863|transmembrane protein 126B##BC038933|TMEM126B|55863|transmembrane protein 126B##BC012065|TMEM126B|55863|transmembrane protein 126B##NM_001244735|TMEM126A|84233|transmembrane protein 126A##NM_032273|TMEM126A|84233|transmembrane protein 126A##AL136941|TMEM126A|84233|transmembrane protein 126A##AK312081|TMEM126A|84233|transmembrane protein 126A##BC007875|TMEM126A|84233|transmembrane protein 126A	0.0	
chr22	47135148	47135258	reg1027592.p2	5.283	+	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	-1048	-	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	-1124	-	CR456470 NM_015124 BC129837 AB463563 CU013020 CU013308	-112527	+	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	23397	+	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	892300	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	1750077	+	NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##CR456470|GRAMD4|23151|GRAM domain containing 4##NM_015124|GRAMD4|23151|GRAM domain containing 4##BC129837|GRAMD4|23151|GRAM domain containing 4##NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A##AK093107|LOC284930|284930|uncharacterized LOC284930##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	0.960896	CTCF.p2:-3:0.961
chr2	43453908	43454088	reg1027787.p3	5.283	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-256	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-268	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-653	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	369150	-	TSC_hg19_v1_chr2_+_43864411 BC063310	410415	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	410441	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.605235	CTCF.p2:17:0.605
chr2	47881546	47881665	reg1028110.p1	5.283	+	AF287302 NM_022055 BC047749	-84122	-	TSC_hg19_v1_chr2_+_47630294 AK223284 AK296831 AK297763 BX649122 BC021566 AK311330 DQ892558 DQ895772 AB489153 BC001122 U03911 CU692370 DQ648894	-251288	+	TSC_hg19_v1_chr2_+_47630289 BC012599 NM_000251 U04045 AK222860 L47574 L47575 L47576 L47577 L47578 L47579 L47580 L47581 L47582 L47583	-251337	+	TSC_hg19_v1_chr2_-_47918421 D28393	36814	-	BC071594 NM_000179 TSC_hg19_v1_chr2_+_48010283 U28946 D89646 BC104665 U54777 BC004246 AK293921 AK308392 AB590153 DQ892898	128691	+	AK304140 AK315108 NM_025133	234246	-	AF287302|KCNK12|56660|potassium channel, subfamily K, member 12##NM_022055|KCNK12|56660|potassium channel, subfamily K, member 12##BC047749|KCNK12|56660|potassium channel, subfamily K, member 12##AK223284|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK296831|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK297763|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BX649122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC021566|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK311330|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ892558|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ895772|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC001122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U03911|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ648894|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC012599|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##NM_000251|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U04045|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK222860|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47574|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47575|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47576|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47577|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47578|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47579|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47580|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47581|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47582|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47583|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##D28393|RPL18A|6142|ribosomal protein L18a##BC071594|MSH6|2956|mutS homolog 6 (E. coli)##NM_000179|MSH6|2956|mutS homolog 6 (E. coli)##U28946|MSH6|2956|mutS homolog 6 (E. coli)##D89646|MSH6|2956|mutS homolog 6 (E. coli)##BC104665|MSH6|2956|mutS homolog 6 (E. coli)##U54777|MSH6|2956|mutS homolog 6 (E. coli)##BC004246|MSH6|2956|mutS homolog 6 (E. coli)##AK293921|MSH6|2956|mutS homolog 6 (E. coli)##AK308392|MSH6|2956|mutS homolog 6 (E. coli)##DQ892898|MSH6|2956|mutS homolog 6 (E. coli)##AK304140|FBXO11|80204|F-box protein 11##AK315108|FBXO11|80204|F-box protein 11##NM_025133|FBXO11|80204|F-box protein 11	0.0	
chr3	111851914	111852094	reg1024953.p1	5.283	+	TSC_hg19_v1_chr3_+_111805267 AK303588 NM_001171747 NM_024616 AY830714 AK026839 BC017064 AK298076	-46776	+	AK131211 NM_001042575 BC117322	-93496	+	NM_001008273 BC004477 TSC_hg19_v1_chr3_+_111718179 AF112201 BT007408 CU677265	-133867	+	CU688884 BC030506 AY212246 AK313368 AK128276 AF521911 NM_001190259 NM_001190260 NM_152785	55	-	BC044801 NM_183061 AK128084	161084	-	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	199954	+	AK303588|C3orf52|79669|chromosome 3 open reading frame 52##NM_001171747|C3orf52|79669|chromosome 3 open reading frame 52##NM_024616|C3orf52|79669|chromosome 3 open reading frame 52##AY830714|C3orf52|79669|chromosome 3 open reading frame 52##AK026839|C3orf52|79669|chromosome 3 open reading frame 52##BC017064|C3orf52|79669|chromosome 3 open reading frame 52##AK298076|C3orf52|79669|chromosome 3 open reading frame 52##AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7##NM_001008273|TAGLN3|29114|transgelin 3##AF112201|TAGLN3|29114|transgelin 3##BT007408|TAGLN3|29114|transgelin 3##BC030506|GCET2|257144|germinal center expressed transcript 2##AY212246|GCET2|257144|germinal center expressed transcript 2##AK313368|GCET2|257144|germinal center expressed transcript 2##AF521911|GCET2|257144|germinal center expressed transcript 2##NM_001190259|GCET2|257144|germinal center expressed transcript 2##NM_001190260|GCET2|257144|germinal center expressed transcript 2##NM_152785|GCET2|257144|germinal center expressed transcript 2##BC044801|SLC9A10|285335|solute carrier family 9, member 10##NM_183061|SLC9A10|285335|solute carrier family 9, member 10##AK128084|SLC9A10|285335|solute carrier family 9, member 10##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule	0.0	
chr4	43711615	43711717	reg1025870.p1	5.283	+	AB528853 NM_001080476	-816385	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	-1052578	-	NM_001080505	-1311811	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	738887	-	AK123347 NM_198353	739157	-	AK096895 BC103995 BC103996 NM_182592	941991	-	NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7	0.124571	
chr11	125384169	125384350	reg1022291.p1	5.282	+	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	-18118	-	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	-349633	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	-349681	+	TSC_hg19_v1_chr11_+_125439294 NM_001007277 NM_004879	55036	+	TSC_hg19_v1_chr11_+_125439332 AB209820	55066	+	TSC_hg19_v1_chr11_+_125439353 AK223029 AK296620 AK301556	55096	+	U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_001007277|EI24|9538|etoposide induced 2.4 mRNA##NM_004879|EI24|9538|etoposide induced 2.4 mRNA##AB209820|EI24|9538|etoposide induced 2.4 mRNA##AK223029|EI24|9538|etoposide induced 2.4 mRNA##AK296620|EI24|9538|etoposide induced 2.4 mRNA##AK301556|EI24|9538|etoposide induced 2.4 mRNA	0.0	
chr15	50169091	50169227	reg1026432.p1	5.282	+	TSC_hg19_v1_chr15_+_49913254 NM_001144955 NM_020234 BC018028 AF168717 AK290184 BC093073 BC032535	-255910	+	BC048125 BC048139 AK057362 NM_152647	-256076	-	NM_002009 BC010956 AK313160 M60828 S81661	-453743	+	AB075819 TSC_hg19_v1_chr15_-_50405521	236357	-	TSC_hg19_v1_chr15_-_50411492 BC144298 BC144297 NM_024837	242307	-	TSC_hg19_v1_chr15_+_50474425 AK290262 NM_001159629 NM_003645 AF096290 AK222859 D88308 AK223145 BC057770 CU691220	305331	+	NM_001144955|DTWD1|56986|DTW domain containing 1##NM_020234|DTWD1|56986|DTW domain containing 1##BC018028|DTWD1|56986|DTW domain containing 1##AF168717|DTWD1|56986|DTW domain containing 1##AK290184|DTWD1|56986|DTW domain containing 1##BC093073|DTWD1|56986|DTW domain containing 1##BC032535|DTWD1|56986|DTW domain containing 1##BC048125|C15orf33|196951|chromosome 15 open reading frame 33##BC048139|C15orf33|196951|chromosome 15 open reading frame 33##AK057362|C15orf33|196951|chromosome 15 open reading frame 33##NM_152647|C15orf33|196951|chromosome 15 open reading frame 33##NM_002009|FGF7|2252|fibroblast growth factor 7##BC010956|FGF7|2252|fibroblast growth factor 7##AK313160|FGF7|2252|fibroblast growth factor 7##M60828|FGF7|2252|fibroblast growth factor 7##S81661|FGF7|2252|fibroblast growth factor 7##AB075819|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4##AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	0.412136	CTCF.p2:-13:0.412
chr16	20719603	20719706	reg1025840.p1	5.282	+	AB059429 BC125177 BC125178 NM_052956	-17077	-	AB073604 AK129944 AK289416 AK309601 NM_001105069 NM_182617	-131995	-	NM_001010845 AK298359 AK055867 AK303774 AK096039 AK298434 BC125175 BC125176	-256753	+	BC000448 TSC_hg19_v1_chr16_-_20753141 AK000281 NM_017736	33503	-	NM_005622 NM_202000 TSC_hg19_v1_chr16_+_20775331 AK223139 AK290322 X80062	55690	+	AB590202 CU679731 DQ895001 DQ895002 TSC_hg19_v1_chr16_-_20817767	98105	-	AB059429|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##BC125177|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##BC125178|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##NM_052956|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##AB073604|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##AK129944|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##AK289416|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##AK309601|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##NM_001105069|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##NM_182617|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##NM_001010845|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK298359|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK055867|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK303774|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK096039|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK298434|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC125175|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC125176|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC000448|THUMPD1|55623|THUMP domain containing 1##AK000281|THUMPD1|55623|THUMP domain containing 1##NM_017736|THUMPD1|55623|THUMP domain containing 1##NM_005622|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##NM_202000|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##AK223139|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##AK290322|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##X80062|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##DQ895001|ERI2|112479|ERI1 exoribonuclease family member 2##DQ895002|ERI2|112479|ERI1 exoribonuclease family member 2	0.195347	
chr20	14170588	14170688	reg1027426.p2	5.282	+	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-194302	+	AK131348 TSC_hg19_v1_chr20_+_13976161 NM_080676	-194532	+	BC035741 AK302170 NM_025229	-199380	-	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	147618	-	BC018687 NM_001033087	1006865	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	2383375	-	BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK131348|MACROD2|140733|MACRO domain containing 2##NM_080676|MACROD2|140733|MACRO domain containing 2##BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B	0.625035	CTCF.p2:-5:0.625
chr4	107819937	107820034	reg1026348.p1	5.282	+	NM_001195138	-531394	-	AK074305 NM_001163436	-582158	-	TSC_hg19_v1_chr4_+_107237727 U10117	-582255	+	NM_014421 AF177395	137467	-	BC011392 AF016496 CR457028 CU690750 BC040940 TSC_hg19_v1_chr4_-_108641372 BC050627 AF033026 AK292774 AK297981 Y10387 BC032513 AF105227 NM_005443	821379	-	AK290344 NM_001136258 AF452717	925782	+	NM_001195138|LOC100507096|100507096|GTPase IMAP family member-like##AK074305|TBCK|93627|TBC1 domain containing kinase##NM_001163436|TBCK|93627|TBC1 domain containing kinase##U10117|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_014421|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##AF177395|DKK2|27123|dickkopf 2 homolog (Xenopus laevis)##BC011392|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF016496|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##CR457028|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC040940|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC050627|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF033026|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK292774|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK297981|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##Y10387|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##BC032513|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AF105227|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##NM_005443|PAPSS1|9061|3'-phosphoadenosine 5'-phosphosulfate synthase 1##AK290344|SGMS2|166929|sphingomyelin synthase 2##NM_001136258|SGMS2|166929|sphingomyelin synthase 2##AF452717|SGMS2|166929|sphingomyelin synthase 2	0.994072	CTCF.p2:-4:0.994
chr8	59058449	59058629	reg1025739.p2	5.282	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-151382	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1152113	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1152137	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	265346	+	X56088 M93133 BC101777 BC112184 NM_000780	354168	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	407213	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.0	
chr1	120020491	120020561	reg1022102.p1	5.281	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	-62765	+	NM_001166120	-62973	+	TSC_hg19_v1_chr1_+_119911431 AK298289 NM_001005783 NM_016527 BC020863 AF231917 AF203975 AY513277	-109082	+	NM_000862 S45679 AK291556 BC031999 M35493 X53321 M27137 DQ891161 DQ894342 CU689258 X55997	29436	+	NM_001080470	169863	-	NM_006623 AK315360 BC011262 TSC_hg19_v1_chr1_+_120254558 AK309662 AK310132 AF171237 BC000303 BC001349 BC023235 DQ892073 EU176546 AB528378 CR456795	234005	+	NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)##BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_000862|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##S45679|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##AK291556|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##BC031999|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M35493|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X53321|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##M27137|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ891161|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##DQ894342|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##X55997|HSD3B1|3283|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1##NM_001080470|ZNF697|90874|zinc finger protein 697##NM_006623|PHGDH|26227|phosphoglycerate dehydrogenase##AK315360|PHGDH|26227|phosphoglycerate dehydrogenase##BC011262|PHGDH|26227|phosphoglycerate dehydrogenase##AK309662|PHGDH|26227|phosphoglycerate dehydrogenase##AK310132|PHGDH|26227|phosphoglycerate dehydrogenase##AF171237|PHGDH|26227|phosphoglycerate dehydrogenase##BC000303|PHGDH|26227|phosphoglycerate dehydrogenase##BC001349|PHGDH|26227|phosphoglycerate dehydrogenase##BC023235|PHGDH|26227|phosphoglycerate dehydrogenase##DQ892073|PHGDH|26227|phosphoglycerate dehydrogenase##EU176546|PHGDH|26227|phosphoglycerate dehydrogenase##CR456795|PHGDH|26227|phosphoglycerate dehydrogenase	0.299997	CTCF.p2:-29:0.300
chr17	47297113	47297226	reg1022930.p2	5.281	+	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-9092	+	NM_001198754	-9234	-	AB037886 NM_001135186 NM_016428	-9581	+	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	10974	-	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	142411	-	BC095460 TSC_hg19_v1_chr17_-_47492215	195046	-	BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AB037886|ABI3|51225|ABI family, member 3##NM_001135186|ABI3|51225|ABI family, member 3##NM_016428|ABI3|51225|ABI family, member 3##BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC095460|PHB|5245|prohibitin	0.694257	CTCF.p2:-5:0.646
chr4	57904315	57904398	reg1021240.p1	5.281	+	TSC_hg19_v1_chr4_+_57845099 NM_000938 X63563 AB384836	-59233	+	TSC_hg19_v1_chr4_+_57845061 AK289823	-59288	+	TSC_hg19_v1_chr4_+_57845029 AK294901 AK299090 AK295132 BC023503	-59320	+	TSC_hg19_v1_chr4_-_57976376 AF540057	72043	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	72176	-	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	72212	-	NM_000938|POLR2B|5431|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa##X63563|POLR2B|5431|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa##AK289823|POLR2B|5431|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa##AK294901|POLR2B|5431|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa##AK299090|POLR2B|5431|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa##AK295132|POLR2B|5431|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa##BC023503|POLR2B|5431|polymerase (RNA) II (DNA directed) polypeptide B, 140kDa##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7	0.170957	
chr5	150827220	150827353	reg1000639.p2	5.281	+	TSC_hg19_v1_chr5_+_150827239 AY162213 BC136437 BC136438	-42	+	AK309323 TSC_hg19_v1_chr5_+_150827187	-97	+	TSC_hg19_v1_chr5_+_150827163 NM_078483 BX537963 AY227111	-126	+	AF231022 NM_001447	121218	-	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	239175	-	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	239222	-	AY162213|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136437|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136438|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AK309323|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##NM_078483|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BX537963|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AY227111|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)	0.014631	
chr9	4797496	4797625	reg1026015.p1	5.281	+	TSC_hg19_v1_chr9_+_4792995 AJ276894 EU831474 EU831561 AF067172	-4517	+	TSC_hg19_v1_chr9_+_4792936 AK022904 BC001025 AK225872	-4637	+	NM_005772 TSC_hg19_v1_chr9_+_4792833	-4727	+	TSC_hg19_v1_chr9_+_4839769 EF553527	42208	+	TSC_hg19_v1_chr9_+_4985085 AK292525	187527	+	TSC_hg19_v1_chr9_+_4985271 AF005216 NM_004972 AF058925	187699	+	AJ276894|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831474|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831561|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF067172|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK022904|RCL1|10171|RNA terminal phosphate cyclase-like 1##BC001025|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK225872|RCL1|10171|RNA terminal phosphate cyclase-like 1##NM_005772|RCL1|10171|RNA terminal phosphate cyclase-like 1##EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK292525|JAK2|3717|Janus kinase 2##AF005216|JAK2|3717|Janus kinase 2##NM_004972|JAK2|3717|Janus kinase 2##AF058925|JAK2|3717|Janus kinase 2	0.932974	CTCF.p2:0:0.933
chr1	46710694	46710801	reg1025192.p1	5.280	+	CR749700 AK056186 NM_001243766	-24778	-	AK057892 NM_001013615 TSC_hg19_v1_chr1_+_46669021 BC034422 AB463505	-41696	+	TSC_hg19_v1_chr1_-_46664112 BC001471 NM_017739	-46622	-	TSC_hg19_v1_chr1_+_46713362 NM_001142548 NM_003579	2621	+	TSC_hg19_v1_chr1_+_46713388 AK292611	2639	+	TSC_hg19_v1_chr1_+_46713434 AK297204	2692	+	CR749700|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##AK056186|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##NM_001243766|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##AK057892|C1orf190|541468|chromosome 1 open reading frame 190##NM_001013615|C1orf190|541468|chromosome 1 open reading frame 190##BC034422|C1orf190|541468|chromosome 1 open reading frame 190##BC001471|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##NM_017739|POMGNT1|55624|protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase##NM_001142548|RAD54L|8438|RAD54-like (S. cerevisiae)##NM_003579|RAD54L|8438|RAD54-like (S. cerevisiae)##AK292611|RAD54L|8438|RAD54-like (S. cerevisiae)##AK297204|RAD54L|8438|RAD54-like (S. cerevisiae)	0.998496	CTCF.p2:6:0.998
chr16	9391465	9391591	reg1030642.p1	5.280	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-205925	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-205988	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-334233	-	BC143273 U09002 NM_001134408	884305	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	884660	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	885149	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.942052	CTCF.p2:10:0.942
chr19	59031245	59031408	reg1015479.p3	5.280	+	TSC_hg19_v1_chr19_-_59031178 AK130056 AK027392	-138	-	BC024738 NM_032792 TSC_hg19_v1_chr19_-_59030968	-373	-	AB527212 TSC_hg19_v1_chr19_-_59023360 AK298446 AK123036 NM_012254	-7949	-	TSC_hg19_v1_chr19_+_59055826 AK225760 BC004978 NM_005762 BC052986	24506	+	TSC_hg19_v1_chr19_+_59055881 U95040	24562	+	U78773 TSC_hg19_v1_chr19_+_59056118 AK313478 AB385179	24744	+	AK027392|ZBTB45|84878|zinc finger and BTB domain containing 45##BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45##NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45##AK298446|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##AK123036|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##NM_012254|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##AK225760|TRIM28|10155|tripartite motif containing 28##BC004978|TRIM28|10155|tripartite motif containing 28##NM_005762|TRIM28|10155|tripartite motif containing 28##BC052986|TRIM28|10155|tripartite motif containing 28##U95040|TRIM28|10155|tripartite motif containing 28##U78773|TRIM28|10155|tripartite motif containing 28##AK313478|TRIM28|10155|tripartite motif containing 28	0.0	
chr3	119062671	119062818	reg1024792.p1	5.280	+	TSC_hg19_v1_chr3_+_119013513 AK293726 BC112163 BC112165 AB384581 HQ258543	-49124	+	TSC_hg19_v1_chr3_+_119013229 AB033030 NM_020754	-49513	+	TSC_hg19_v1_chr3_-_118959726 AK001006 AK301688 AK314425 BX647468 CR749555 NM_003778 NM_212543	-103007	-	TSC_hg19_v1_chr3_-_119182462 BC003192 BC010070 BC021277 AK222950 AK223248 AK001764 NM_018266	119725	-	TSC_hg19_v1_chr3_+_119187809 NM_152305 AY298903 BC030614 AK295984 AK301002 AK315367 AK222937 AF168711 BC048810 AY358581 AK075444 BC011871 CU688946 CU690580	125081	+	NM_016589 TSC_hg19_v1_chr3_+_119217393 AF139077 AL136622 AK026250 AK225954 AF210057 AL390077 AY358633 AL390090 BC012341 AB528090 AM393632 CU680290 CR457158 CR533524	154729	+	AK293726|ARHGAP31|57514|Rho GTPase activating protein 31##BC112163|ARHGAP31|57514|Rho GTPase activating protein 31##BC112165|ARHGAP31|57514|Rho GTPase activating protein 31##HQ258543|ARHGAP31|57514|Rho GTPase activating protein 31##AB033030|ARHGAP31|57514|Rho GTPase activating protein 31##NM_020754|ARHGAP31|57514|Rho GTPase activating protein 31##AK001006|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK301688|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK314425|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BX647468|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##CR749555|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_003778|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_212543|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BC003192|TMEM39A|55254|transmembrane protein 39A##BC010070|TMEM39A|55254|transmembrane protein 39A##BC021277|TMEM39A|55254|transmembrane protein 39A##AK222950|TMEM39A|55254|transmembrane protein 39A##AK223248|TMEM39A|55254|transmembrane protein 39A##AK001764|TMEM39A|55254|transmembrane protein 39A##NM_018266|TMEM39A|55254|transmembrane protein 39A##NM_152305|POGLUT1|56983|protein O-glucosyltransferase 1##AY298903|POGLUT1|56983|protein O-glucosyltransferase 1##BC030614|POGLUT1|56983|protein O-glucosyltransferase 1##AK295984|POGLUT1|56983|protein O-glucosyltransferase 1##AK301002|POGLUT1|56983|protein O-glucosyltransferase 1##AK315367|POGLUT1|56983|protein O-glucosyltransferase 1##AK222937|POGLUT1|56983|protein O-glucosyltransferase 1##AF168711|POGLUT1|56983|protein O-glucosyltransferase 1##BC048810|POGLUT1|56983|protein O-glucosyltransferase 1##AY358581|POGLUT1|56983|protein O-glucosyltransferase 1##AK075444|POGLUT1|56983|protein O-glucosyltransferase 1##NM_016589|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF139077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL136622|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK026250|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK225954|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF210057|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AY358633|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390090|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##BC012341|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AM393632|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR457158|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR533524|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1	0.43046	CTCF.p2:10:0.337
chr4	113152462	113152643	reg1027200.p1	5.280	+	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	-85938	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1589274	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1594383	-	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	532	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	54449	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	65975	+	BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1	0.0	
chr5	110797198	110797332	reg1025451.p2	5.280	+	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	-237316	+	AF385437 NM_139281 BC133025 BC136517 AK095312 TSC_hg19_v1_chr5_+_110428045 AL832494	-369306	+	AY037115 NM_033035	-389876	+	AK054566 NM_139164 TSC_hg19_v1_chr5_-_110848234 AK290312 AK310848 BC019632 AK125317 AK308851 AK315863 AK315869	50937	-	BC042956 TSC_hg19_v1_chr5_-_110848300	51029	-	NM_001142483	294682	-	L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AF385437|WDR36|134430|WD repeat domain 36##NM_139281|WDR36|134430|WD repeat domain 36##BC133025|WDR36|134430|WD repeat domain 36##BC136517|WDR36|134430|WD repeat domain 36##AK095312|WDR36|134430|WD repeat domain 36##AL832494|WDR36|134430|WD repeat domain 36##AY037115|TSLP|85480|thymic stromal lymphopoietin##NM_033035|TSLP|85480|thymic stromal lymphopoietin##AK054566|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_139164|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK290312|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK310848|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC019632|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK125317|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK308851|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315863|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315869|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC042956|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13	0.0	
chr6_qbl_hap6	4361568	4361678	reg1027707.p1	5.280	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.964158	CTCF.p2:-1:0.964
chr7	1311907	1312061	reg1026038.p1	5.280	+	TSC_hg19_v1_chr7_+_1272552 NM_001080461	-39382	+	TSC_hg19_v1_chr7_+_1200097 AK090593	-111871	+	TSC_hg19_v1_chr7_-_1199853 NM_182491	-112145	-	CU691530 EU832111 EU832205 AK074068 BC037988 TSC_hg19_v1_chr7_-_1499102	187049	-	TSC_hg19_v1_chr7_-_1499107 AK027124 NM_182924	187123	-	TSC_hg19_v1_chr7_-_1544019 AK093809 AX748318 NM_001080453	232049	-	NM_001080461|UNCX|340260|UNC homeobox##NM_182491|ZFAND2A|90637|zinc finger, AN1-type domain 2A##EU832111|MICALL2|79778|MICAL-like 2##EU832205|MICALL2|79778|MICAL-like 2##AK074068|MICALL2|79778|MICAL-like 2##BC037988|MICALL2|79778|MICAL-like 2##AK027124|MICALL2|79778|MICAL-like 2##NM_182924|MICALL2|79778|MICAL-like 2##NM_001080453|INTS1|26173|integrator complex subunit 1	0.0	
chr9	19967695	19967842	reg1030760.p1	5.280	+	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-180817	-	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-558765	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-587541	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	654680	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	654728	-	AK056522 AY139834 NM_017794	690539	+	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797	0.126526	
chr10	2661814	2661928	reg1029415.p1	5.279	+	AF034837 NM_018702	-882202	-	TSC_hg19_v1_chr10_+_1102822 AK292591	-1559045	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-1559102	+	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	447876	+	AK092597 AX747622 NM_001242339	448947	+	BC021698 TSC_hg19_v1_chr10_+_3151628	489741	+	AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet##BC021698|PFKP|5214|phosphofructokinase, platelet	0.130181	
chr10	29681476	29681609	reg1027723.p1	5.279	+	NM_032517 BC021730 AY358694	-103526	+	TSC_hg19_v1_chr10_+_28966451 NM_012342 AK290639 BC019252 AK223065 U23070	-715095	+	TSC_hg19_v1_chr10_+_28878692 BC010356	-802836	+	TSC_hg19_v1_chr10_+_29698475 BC066966 BC050354	16927	+	BC107795 AK056080 TSC_hg19_v1_chr10_+_29698485	16943	+	TSC_hg19_v1_chr10_+_29698496 BC073888	16956	+	NM_032517|LYZL1|84569|lysozyme-like 1##BC021730|LYZL1|84569|lysozyme-like 1##AY358694|LYZL1|84569|lysozyme-like 1##NM_012342|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK290639|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC019252|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##AK223065|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##U23070|BAMBI|25805|BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)##BC010356|WAC|51322|WW domain containing adaptor with coiled-coil##BC066966|LOC387647|387647|patched domain containing 3 pseudogene##BC050354|LOC387647|387647|patched domain containing 3 pseudogene##BC107795|LOC387647|387647|patched domain containing 3 pseudogene##AK056080|LOC387647|387647|patched domain containing 3 pseudogene##BC073888|LOC387647|387647|patched domain containing 3 pseudogene	0.971978	CTCF.p2:-12:0.972
chr14	69122892	69123003	reg1026788.p2	5.279	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-836427	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-839648	-	AK315462 NM_152443	-954345	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	136773	-	NM_001244698 NM_004926	137683	-	NM_001244701 AB528867	140037	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.01656	
chr3	112997159	112997285	reg1027240.p2	5.279	+	AY358328 NM_033254 AK309055	-65823	+	BC067743 TSC_hg19_v1_chr3_-_112738514 AK295954 AK293218 BC014673 NM_015412 CR749341	-258676	-	TSC_hg19_v1_chr3_-_112738512 AK301161 EU831596 EU831683 EU831956 EU832050 CU688320 AL117573 BC056663 AK295165 AK304022 AK024325 AK300811 AK304083	-258724	-	BC101582 BC113553 AK056472 NM_001164496 NM_018338	163117	-	TSC_hg19_v1_chr3_-_113233690 AK296160	236464	-	AY099107 BC036951 TSC_hg19_v1_chr3_-_113234023 AK057966 AL832327 AL832148 NM_144718	236771	-	AY358328|BOC|91653|Boc homolog (mouse)##NM_033254|BOC|91653|Boc homolog (mouse)##AK309055|BOC|91653|Boc homolog (mouse)##BC067743|C3orf17|25871|chromosome 3 open reading frame 17##AK295954|C3orf17|25871|chromosome 3 open reading frame 17##AK293218|C3orf17|25871|chromosome 3 open reading frame 17##BC014673|C3orf17|25871|chromosome 3 open reading frame 17##NM_015412|C3orf17|25871|chromosome 3 open reading frame 17##CR749341|C3orf17|25871|chromosome 3 open reading frame 17##AK301161|C3orf17|25871|chromosome 3 open reading frame 17##EU831596|C3orf17|25871|chromosome 3 open reading frame 17##EU831683|C3orf17|25871|chromosome 3 open reading frame 17##EU831956|C3orf17|25871|chromosome 3 open reading frame 17##EU832050|C3orf17|25871|chromosome 3 open reading frame 17##AL117573|C3orf17|25871|chromosome 3 open reading frame 17##BC056663|C3orf17|25871|chromosome 3 open reading frame 17##AK295165|C3orf17|25871|chromosome 3 open reading frame 17##AK304022|C3orf17|25871|chromosome 3 open reading frame 17##AK024325|C3orf17|25871|chromosome 3 open reading frame 17##AK300811|C3orf17|25871|chromosome 3 open reading frame 17##AK304083|C3orf17|25871|chromosome 3 open reading frame 17##BC101582|WDR52|55779|WD repeat domain 52##BC113553|WDR52|55779|WD repeat domain 52##AK056472|WDR52|55779|WD repeat domain 52##NM_001164496|WDR52|55779|WD repeat domain 52##NM_018338|WDR52|55779|WD repeat domain 52##AK296160|SPICE1|152185|spindle and centriole associated protein 1##AY099107|SPICE1|152185|spindle and centriole associated protein 1##BC036951|SPICE1|152185|spindle and centriole associated protein 1##AK057966|SPICE1|152185|spindle and centriole associated protein 1##AL832327|SPICE1|152185|spindle and centriole associated protein 1##AL832148|SPICE1|152185|spindle and centriole associated protein 1##NM_144718|SPICE1|152185|spindle and centriole associated protein 1	0.716107	CTCF.p2:18:0.716
chr9	129921717	129921801	reg1028780.p1	5.279	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-36729	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-36797	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-36851	-	NM_032293 AK293732 AK095679	105048	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	237687	+	TSC_hg19_v1_chr9_-_130186602 AK124330	264807	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.137897	
chr10	51612075	51612180	reg1027463.p1	5.278	+	AK292480 NM_001145262	-35843	+	NM_005437 AL162047 TSC_hg19_v1_chr10_+_51572443 BC012736	-39722	+	TSC_hg19_v1_chr10_+_51565230 BC001562 AK129911 AK302794 S71225 X77548	-46894	+	CU687598 CU688220 AK304883 AK223331 BC066951 NM_006327 TSC_hg19_v1_chr10_-_51623335 AF030162 AY442341 BC062707	11172	-	NM_001077665	135950	+	TSC_hg19_v1_chr10_+_51827685 BC150611 AK001686 NM_001005751 AK295129	215553	+	AK292480|NCOA4|8031|nuclear receptor coactivator 4##NM_001145262|NCOA4|8031|nuclear receptor coactivator 4##NM_005437|NCOA4|8031|nuclear receptor coactivator 4##AL162047|NCOA4|8031|nuclear receptor coactivator 4##BC012736|NCOA4|8031|nuclear receptor coactivator 4##BC001562|NCOA4|8031|nuclear receptor coactivator 4##AK129911|NCOA4|8031|nuclear receptor coactivator 4##AK302794|NCOA4|8031|nuclear receptor coactivator 4##X77548|NCOA4|8031|nuclear receptor coactivator 4##AK304883|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##AK223331|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##BC066951|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##NM_006327|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##AF030162|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##AY442341|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##BC062707|TIMM23|100287932|translocase of inner mitochondrial membrane 23 homolog (yeast)##NM_001077665|AGAP6|414189|ArfGAP with GTPase domain, ankyrin repeat and PH domain 6##BC150611|FAM21C|253725|family with sequence similarity 21, member C##AK001686|FAM21A|387680|family with sequence similarity 21, member A##NM_001005751|FAM21A|387680|family with sequence similarity 21, member A##AK295129|FAM21A|387680|family with sequence similarity 21, member A	0.999741	CTCF.p2:15:1.000
chr11	2216240	2216402	reg1026125.p1	5.278	+	M20911 M20912 AB591012 DQ677336 DQ677337 M17589 Y00414 M24790 NM_000360 NM_199292 NM_199293 X05290 BC143611 BC104967 BC143614	-23261	-	AY899304 X70508 BC005255 DQ104204 DQ104205 NM_000207 NM_001042376 NM_001185097 NM_001185098	-33898	-	TSC_hg19_v1_chr11_-_2170792 DQ104203 NM_001007139	-45509	-	TSC_hg19_v1_chr11_-_2291819 BC057801 BC136561 BC136567	75536	-	BC028140 NM_005170 TSC_hg19_v1_chr11_-_2292209	75874	-	TSC_hg19_v1_chr11_-_2323122 AK290921 BC028070 AK310172 NM_001142946 AB029488	106856	-	M20911|TH|7054|tyrosine hydroxylase##M20912|TH|7054|tyrosine hydroxylase##DQ677336|TH|7054|tyrosine hydroxylase##DQ677337|TH|7054|tyrosine hydroxylase##M17589|TH|7054|tyrosine hydroxylase##Y00414|TH|7054|tyrosine hydroxylase##M24790|TH|7054|tyrosine hydroxylase##NM_000360|TH|7054|tyrosine hydroxylase##NM_199292|TH|7054|tyrosine hydroxylase##NM_199293|TH|7054|tyrosine hydroxylase##X05290|TH|7054|tyrosine hydroxylase##BC143611|TH|7054|tyrosine hydroxylase##BC104967|TH|7054|tyrosine hydroxylase##BC143614|TH|7054|tyrosine hydroxylase##AY899304|INS|3630|insulin##X70508|INS|3630|insulin##BC005255|INS|3630|insulin##DQ104204|INS-IGF2|723961|INS-IGF2 readthrough##DQ104205|INS-IGF2|723961|INS-IGF2 readthrough##NM_000207|INS|3630|insulin##NM_001042376|INS-IGF2|723961|INS-IGF2 readthrough##NM_001185097|INS|3630|insulin##NM_001185098|INS|3630|insulin##DQ104203|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##NM_001007139|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##BC057801|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136561|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136567|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC028140|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##NM_005170|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##AK290921|C11orf21|29125|chromosome 11 open reading frame 21##BC028070|C11orf21|29125|chromosome 11 open reading frame 21##AK310172|C11orf21|29125|chromosome 11 open reading frame 21##NM_001142946|C11orf21|29125|chromosome 11 open reading frame 21##AB029488|C11orf21|29125|chromosome 11 open reading frame 21	0.97159	CTCF.p2:3:0.972
chr15	31595415	31595537	reg1027657.p2	5.278	+	NM_001243538	-72427	-	GQ502181 HM135791 NM_001252020	-142048	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-201559	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	23862	+	AJ430383 NM_130901	352065	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	567353	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.0	
chr4	68612534	68612692	reg1025345.p1	5.278	+	TSC_hg19_v1_chr4_-_68566867 AL832015 AL832458 AK094969 AK314371 BC031637 BC126484 BC126486 NM_018227	-45742	-	TSC_hg19_v1_chr4_-_68566842 AB014773 AB463334 AM392673 EF623993	-45795	-	TSC_hg19_v1_chr4_+_68424444 AB023483 NM_012108 AK313676 BC014958 AB528919 CU677135	-188128	+	NM_000406 NM_001012763	9190	-	AK296853 BC125195 BC125196 AB002134 NM_004262 AK290289	137094	-	AY498712 BC111796 AK292950 AF071882 AK131518 NM_001114387 NM_182606	216574	-	AL832015|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AL832458|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK094969|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK314371|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC031637|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC126484|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC126486|UBA6|55236|ubiquitin-like modifier activating enzyme 6##NM_018227|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AB014773|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AM392673|UBA6|55236|ubiquitin-like modifier activating enzyme 6##EF623993|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AB023483|STAP1|26228|signal transducing adaptor family member 1##NM_012108|STAP1|26228|signal transducing adaptor family member 1##AK313676|STAP1|26228|signal transducing adaptor family member 1##BC014958|STAP1|26228|signal transducing adaptor family member 1##NM_000406|GNRHR|2798|gonadotropin-releasing hormone receptor##NM_001012763|GNRHR|2798|gonadotropin-releasing hormone receptor##AK296853|TMPRSS11D|9407|transmembrane protease, serine 11D##BC125195|TMPRSS11D|9407|transmembrane protease, serine 11D##BC125196|TMPRSS11D|9407|transmembrane protease, serine 11D##AB002134|TMPRSS11D|9407|transmembrane protease, serine 11D##NM_004262|TMPRSS11D|9407|transmembrane protease, serine 11D##AK290289|TMPRSS11D|9407|transmembrane protease, serine 11D##AY498712|TMPRSS11A|339967|transmembrane protease, serine 11A##BC111796|TMPRSS11A|339967|transmembrane protease, serine 11A##AK292950|TMPRSS11A|339967|transmembrane protease, serine 11A##AF071882|TMPRSS11A|339967|transmembrane protease, serine 11A##AK131518|TMPRSS11A|339967|transmembrane protease, serine 11A##NM_001114387|TMPRSS11A|339967|transmembrane protease, serine 11A##NM_182606|TMPRSS11A|339967|transmembrane protease, serine 11A	0.661697	CTCF.p2:-2:0.662
chr5	95931334	95931438	reg1020207.p1	5.278	+	AB208874 AB590528 BC130295 BC136486 TSC_hg19_v1_chr5_-_95768927 X64810 M90753 BC031211 NM_000439	-162564	-	AK303888 NM_001177875	-163524	-	AK308575 NM_001177876	-182698	-	TSC_hg19_v1_chr5_+_95997755 NM_001190442 AB208816	66365	+	TSC_hg19_v1_chr5_+_95997965 BC016066 NM_001042440	66542	+	BC013579 TSC_hg19_v1_chr5_+_95998220	66809	+	AB208874|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC130295|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC136486|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##X64810|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##M90753|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC031211|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_000439|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AK303888|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177875|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001190442|CAST|831|calpastatin##AB208816|CAST|831|calpastatin##BC016066|CAST|831|calpastatin##NM_001042440|CAST|831|calpastatin##BC013579|CAST|831|calpastatin	0.141651	
chr9	134351464	134351592	reg1024807.p1	5.278	+	TSC_hg19_v1_chr9_+_134348954 BX647528	-2505	+	CU678266 TSC_hg19_v1_chr9_+_134305548	-45988	+	NM_013318 TSC_hg19_v1_chr9_+_134305488	-46046	+	TSC_hg19_v1_chr9_+_134378304 AK295561 NM_001077365 NM_001077366 NM_001136113 NM_001136114 NM_007171 AK074888 AK301486 AF095136	26768	+	TSC_hg19_v1_chr9_+_134378330 AK074874 AK299646 AK303254 AK307876 AK295458	26800	+	AK300393 TSC_hg19_v1_chr9_+_134378334	26806	+	BX647528|PRRC2B|84726|proline-rich coiled-coil 2B##NM_013318|PRRC2B|84726|proline-rich coiled-coil 2B##AK295561|POMT1|10585|protein-O-mannosyltransferase 1##NM_001077365|POMT1|10585|protein-O-mannosyltransferase 1##NM_001077366|POMT1|10585|protein-O-mannosyltransferase 1##NM_001136113|POMT1|10585|protein-O-mannosyltransferase 1##NM_001136114|POMT1|10585|protein-O-mannosyltransferase 1##NM_007171|POMT1|10585|protein-O-mannosyltransferase 1##AK074888|POMT1|10585|protein-O-mannosyltransferase 1##AK301486|POMT1|10585|protein-O-mannosyltransferase 1##AF095136|POMT1|10585|protein-O-mannosyltransferase 1##AK074874|POMT1|10585|protein-O-mannosyltransferase 1##AK299646|POMT1|10585|protein-O-mannosyltransferase 1##AK303254|POMT1|10585|protein-O-mannosyltransferase 1##AK307876|POMT1|10585|protein-O-mannosyltransferase 1##AK295458|POMT1|10585|protein-O-mannosyltransferase 1##AK300393|POMT1|10585|protein-O-mannosyltransferase 1	0.911904	CTCF.p2:-11:0.912
chr10	14993683	14993818	reg1025677.p1	5.277	+	NM_001193424 NM_001193426 BC029360 TSC_hg19_v1_chr10_+_14920864 NM_001193425 NM_001193427 AK222565 AK225369 AK027067 CU688630 BC007754 NM_024670	-72911	+	TSC_hg19_v1_chr10_+_14880343 AF143723 AK292323 AB528152 AB587406	-113379	+	TSC_hg19_v1_chr10_+_14880335 AF112210 BC119690 BC119691	-113412	+	CU692508 TSC_hg19_v1_chr10_-_14996096 BC108276 AK022922 BC022254 AF395747 AF395748 AF395749 AF395750 AF395751 AF395752 AJ296101 BC009185 BX648858 AK021422 AK290598 AK307912 NM_001033855 NM_001033857 NM_001033858 NM_022487	2304	-	NM_001080836	7687	+	NM_001039702 NM_018324 BC050372 AK001844 AK001968	92177	+	NM_001193424|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193426|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##BC029360|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193425|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193427|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK222565|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK225369|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK027067|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##BC007754|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_024670|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AF143723|HSPA14|51182|heat shock 70kDa protein 14##AK292323|HSPA14|51182|heat shock 70kDa protein 14##AF112210|HSPA14|51182|heat shock 70kDa protein 14##BC119690|HSPA14|51182|heat shock 70kDa protein 14##BC119691|HSPA14|51182|heat shock 70kDa protein 14##BC108276|DCLRE1C|64421|DNA cross-link repair 1C##AK022922|DCLRE1C|64421|DNA cross-link repair 1C##BC022254|DCLRE1C|64421|DNA cross-link repair 1C##AF395747|DCLRE1C|64421|DNA cross-link repair 1C##AF395748|DCLRE1C|64421|DNA cross-link repair 1C##AF395749|DCLRE1C|64421|DNA cross-link repair 1C##AF395750|DCLRE1C|64421|DNA cross-link repair 1C##AF395751|DCLRE1C|64421|DNA cross-link repair 1C##AF395752|DCLRE1C|64421|DNA cross-link repair 1C##AJ296101|DCLRE1C|64421|DNA cross-link repair 1C##BC009185|DCLRE1C|64421|DNA cross-link repair 1C##BX648858|DCLRE1C|64421|DNA cross-link repair 1C##AK021422|DCLRE1C|64421|DNA cross-link repair 1C##AK290598|DCLRE1C|64421|DNA cross-link repair 1C##AK307912|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033855|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033857|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033858|DCLRE1C|64421|DNA cross-link repair 1C##NM_022487|DCLRE1C|64421|DNA cross-link repair 1C##NM_001080836|MEIG1|644890|meiosis expressed gene 1 homolog (mouse)##NM_001039702|OLAH|55301|oleoyl-ACP hydrolase##NM_018324|OLAH|55301|oleoyl-ACP hydrolase##BC050372|OLAH|55301|oleoyl-ACP hydrolase##AK001844|OLAH|55301|oleoyl-ACP hydrolase##AK001968|OLAH|55301|oleoyl-ACP hydrolase	0.0	
chr1	68319449	68319572	reg1029695.p1	5.277	+	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	-20400	-	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	-21522	+	TSC_hg19_v1_chr1_+_68151094 AB463698 AM393439 DQ893229 DQ896558	-168376	+	BC005362 U96750 NM_004675	196875	-	TSC_hg19_v1_chr1_-_68698207 BC137109 BC137113 BC110826 AB097018 AK074984 AK301613 BX648748 BX538320 NM_001002292 NM_001193334 AK074583 AK309779 DQ323735 AY359035 NM_024911	378647	-	AK289925 BC075035 BC075036 NM_000329 U18991	596126	-	AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK124028|LOC100289178|100289178|uncharacterized LOC100289178##AM393439|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ893229|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ896558|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##BC137109|WLS|79971|wntless homolog (Drosophila)##BC137113|WLS|79971|wntless homolog (Drosophila)##BC110826|WLS|79971|wntless homolog (Drosophila)##AB097018|WLS|79971|wntless homolog (Drosophila)##AK074984|WLS|79971|wntless homolog (Drosophila)##AK301613|WLS|79971|wntless homolog (Drosophila)##BX648748|WLS|79971|wntless homolog (Drosophila)##BX538320|WLS|79971|wntless homolog (Drosophila)##NM_001002292|WLS|79971|wntless homolog (Drosophila)##NM_001193334|WLS|79971|wntless homolog (Drosophila)##AK074583|WLS|79971|wntless homolog (Drosophila)##AK309779|WLS|79971|wntless homolog (Drosophila)##DQ323735|WLS|79971|wntless homolog (Drosophila)##AY359035|WLS|79971|wntless homolog (Drosophila)##NM_024911|WLS|79971|wntless homolog (Drosophila)##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	0.876417	CTCF.p2:-11:0.876
chr6	422842	423023	reg1027521.p2	5.277	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-31168	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-130435	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-130847	+	AF508547 BC101697 BC101699 NM_148959	234021	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	270158	-	BC053850 NM_033260	889742	+	NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1	0.0	
chr9	95264398	95264526	reg1026539.p2	5.277	+	TSC_hg19_v1_chr9_-_95244789 AK308107 AY029191 AY358329 BC022059 BC063114 NM_001193335 NM_017680	-19666	-	AK027359 AK304501 TSC_hg19_v1_chr9_-_95244656 AK172737	-19815	-	AB000114 AK313055 AK225922 AY358872 BC046356 NM_005014	-77765	-	AB011792 AK303922 AK312820 AK296458 BX537976 NM_001197295 NM_001197296 NM_001393	33850	-	AF520811 TSC_hg19_v1_chr9_-_95432355 AK023225 AF351202	167851	-	TSC_hg19_v1_chr9_-_95432542 BC026154 NM_022755	168095	-	AK308107|ASPN|54829|asporin##AY029191|ASPN|54829|asporin##AY358329|ASPN|54829|asporin##BC022059|ASPN|54829|asporin##BC063114|ASPN|54829|asporin##NM_001193335|ASPN|54829|asporin##NM_017680|ASPN|54829|asporin##AK027359|ASPN|54829|asporin##AK304501|ASPN|54829|asporin##AK172737|ASPN|54829|asporin##AB000114|OMD|4958|osteomodulin##AK313055|OMD|4958|osteomodulin##AK225922|OMD|4958|osteomodulin##AY358872|OMD|4958|osteomodulin##BC046356|OMD|4958|osteomodulin##NM_005014|OMD|4958|osteomodulin##AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AF520811|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AK023225|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF351202|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##BC026154|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##NM_022755|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase	0.700562	CTCF.p2:2:0.701
chr11	448306	448384	reg1013750.p1	5.276	+	AK074088 TSC_hg19_v1_chr11_-_442005 AK316479 NM_001012302	-6342	-	BC144415 AK026923 TSC_hg19_v1_chr11_-_441974 AK303642 BC128557	-6374	-	BC025953 AK025099 AK172830 NM_001135053 NM_021805 AK093427	-30956	-	TSC_hg19_v1_chr11_+_450299 BC001210 NM_030783	1951	+	AK311723 TSC_hg19_v1_chr11_+_450363 AK307374 AL834357	2026	+	TSC_hg19_v1_chr11_+_450413 DQ891743 DQ894922 CU674608	2095	+	AK074088|ANO9|338440|anoctamin 9##AK316479|ANO9|338440|anoctamin 9##NM_001012302|ANO9|338440|anoctamin 9##BC144415|ANO9|338440|anoctamin 9##AK026923|ANO9|338440|anoctamin 9##AK303642|ANO9|338440|anoctamin 9##BC128557|ANO9|338440|anoctamin 9##BC025953|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK025099|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK172830|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_001135053|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_021805|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK093427|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##BC001210|PTDSS2|81490|phosphatidylserine synthase 2##NM_030783|PTDSS2|81490|phosphatidylserine synthase 2##AK311723|PTDSS2|81490|phosphatidylserine synthase 2##AL834357|PTDSS2|81490|phosphatidylserine synthase 2##DQ891743|PTDSS2|81490|phosphatidylserine synthase 2##DQ894922|PTDSS2|81490|phosphatidylserine synthase 2	0.98689	
chr12	5052747	5052906	reg1018825.p1	5.276	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	-33766	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	-134411	+	AJ271385 NM_017417 BC140888 BC140889	-223058	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	100293	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	488450	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	550512	+	NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3	0.0	
chr16	4674331	4674464	reg1023697.p2	5.276	+	BC040160 TSC_hg19_v1_chr16_-_4665044	-9369	-	TSC_hg19_v1_chr16_-_4664901 BC062534 NM_145253	-9464	-	TSC_hg19_v1_chr16_-_4664870 CU687554 AF370434 BC012018 AK055785 BC025327 BC008681	-9563	-	TSC_hg19_v1_chr16_+_4674826 NM_001142289 NM_001142290 NM_001142291 NM_015246	426	+	TSC_hg19_v1_chr16_+_4674861 AK299052 BC050389 AB011116	465	+	AB383902 CU690664 EF471397 EF471398 TSC_hg19_v1_chr16_+_4675003	591	+	BC040160|FAM100A|124402|family with sequence similarity 100, member A##BC062534|FAM100A|124402|family with sequence similarity 100, member A##NM_145253|FAM100A|124402|family with sequence similarity 100, member A##AF370434|FAM100A|124402|family with sequence similarity 100, member A##BC012018|FAM100A|124402|family with sequence similarity 100, member A##AK055785|FAM100A|124402|family with sequence similarity 100, member A##BC025327|FAM100A|124402|family with sequence similarity 100, member A##BC008681|FAM100A|124402|family with sequence similarity 100, member A##NM_001142289|MGRN1|23295|mahogunin, ring finger 1##NM_001142290|MGRN1|23295|mahogunin, ring finger 1##NM_001142291|MGRN1|23295|mahogunin, ring finger 1##NM_015246|MGRN1|23295|mahogunin, ring finger 1##AK299052|MGRN1|23295|mahogunin, ring finger 1##BC050389|MGRN1|23295|mahogunin, ring finger 1##AB011116|MGRN1|23295|mahogunin, ring finger 1##EF471397|MGRN1|23295|mahogunin, ring finger 1##EF471398|MGRN1|23295|mahogunin, ring finger 1	0.667857	CTCF.p2:4:0.668
chr17	43370911	43371036	reg1022959.p1	5.276	+	BC028124 AF433663 AK302184 AK058143 NM_152343	-31518	-	TSC_hg19_v1_chr17_+_43325300 AK311429	-45669	+	AK096807 TSC_hg19_v1_chr17_-_43319268	-51777	-	TSC_hg19_v1_chr17_-_43394387 BC035576 BC022296 AK290203 AK313085 NM_003954	23402	-	TSC_hg19_v1_chr17_-_43487753 AK092891 AX747793 AK300880	116777	-	TSC_hg19_v1_chr17_-_43503000 AK125535 NM_199282	132028	-	BC028124|C17orf46|124783|chromosome 17 open reading frame 46##AF433663|C17orf46|124783|chromosome 17 open reading frame 46##AK302184|C17orf46|124783|chromosome 17 open reading frame 46##AK058143|C17orf46|124783|chromosome 17 open reading frame 46##NM_152343|C17orf46|124783|chromosome 17 open reading frame 46##AK311429|LOC100133991|100133991|uncharacterized LOC100133991##BC035576|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC022296|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK290203|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK313085|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##NM_003954|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK092891|ARHGAP27|201176|Rho GTPase activating protein 27##AK300880|ARHGAP27|201176|Rho GTPase activating protein 27##AK125535|ARHGAP27|201176|Rho GTPase activating protein 27##NM_199282|ARHGAP27|201176|Rho GTPase activating protein 27	0.893639	CTCF.p2:-15:0.894
chr18	47310997	47311137	reg1028944.p1	5.276	+	AK315252 TSC_hg19_v1_chr18_+_47088426 AF118767 AK291799 NM_006033 AK300333 BC060825 AY358928	-222639	+	TSC_hg19_v1_chr18_+_47087059 AK125344	-224005	+	TSC_hg19_v1_chr18_-_47018852 AK304659 AK311828 BC066323 BC017831 BC066324 NM_000985 NM_001035006 NM_001199340 NM_001199345 NM_001199356	-292179	-	CU674934 DQ893376 DQ896697 AB529169 BC001918 TSC_hg19_v1_chr18_-_47339904 AK225457 D16294	28847	-	TSC_hg19_v1_chr18_-_47340253 AK054673 NM_006111 AK314462	29203	-	TSC_hg19_v1_chr18_+_47340396 AK123464	29324	+	AK315252|LIPG|9388|lipase, endothelial##AF118767|LIPG|9388|lipase, endothelial##AK291799|LIPG|9388|lipase, endothelial##NM_006033|LIPG|9388|lipase, endothelial##AK300333|LIPG|9388|lipase, endothelial##BC060825|LIPG|9388|lipase, endothelial##AY358928|LIPG|9388|lipase, endothelial##AK125344|LIPG|9388|lipase, endothelial##AK304659|RPL17|6139|ribosomal protein L17##AK311828|RPL17|6139|ribosomal protein L17##BC066323|RPL17|6139|ribosomal protein L17##BC017831|RPL17|6139|ribosomal protein L17##BC066324|RPL17|6139|ribosomal protein L17##NM_000985|RPL17|6139|ribosomal protein L17##NM_001035006|RPL17|6139|ribosomal protein L17##NM_001199340|RPL17|6139|ribosomal protein L17##NM_001199345|RPL17|6139|ribosomal protein L17##NM_001199356|RPL17-C18ORF32|100526842|RPL17-C18orf32 readthrough##DQ893376|ACAA2|10449|acetyl-CoA acyltransferase 2##DQ896697|ACAA2|10449|acetyl-CoA acyltransferase 2##BC001918|ACAA2|10449|acetyl-CoA acyltransferase 2##AK225457|ACAA2|10449|acetyl-CoA acyltransferase 2##D16294|ACAA2|10449|acetyl-CoA acyltransferase 2##AK054673|ACAA2|10449|acetyl-CoA acyltransferase 2##NM_006111|ACAA2|10449|acetyl-CoA acyltransferase 2##AK314462|ACAA2|10449|acetyl-CoA acyltransferase 2	0.078362	
chr2	237439253	237439434	reg1025373.p1	5.276	+	BC043504 NM_024726 AK294105 BC028699	-23211	-	NM_212556 BX647589	-266349	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-362711	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	39085	+	BC036499 NM_006710 NM_198189	554675	+	TSC_hg19_v1_chr2_-_237994424 AK056246	555094	-	BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037	0.487489	CTCF.p2:22:0.487
chr11	101307405	101307496	reg1023397.p2	5.275	+	AK304853 TSC_hg19_v1_chr11_-_101000531 NM_000926	-306947	-	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	-307651	-	AK314174 AF247167 NM_032021	-444686	+	AJ006276 NM_004621	147208	-	TSC_hg19_v1_chr11_+_101785752 NM_020802 AK057230 BC036525 BC146807	478337	+	TSC_hg19_v1_chr11_+_101785949 AK309479 BX647415	478542	+	AK304853|PGR|5241|progesterone receptor##NM_000926|PGR|5241|progesterone receptor##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##AJ006276|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6##NM_004621|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6##NM_020802|KIAA1377|57562|KIAA1377##AK057230|KIAA1377|57562|KIAA1377##BC036525|KIAA1377|57562|KIAA1377##BC146807|KIAA1377|57562|KIAA1377##BX647415|KIAA1377|57562|KIAA1377	0.98862	CTCF.p2:4:0.989
chr13	24283808	24283968	reg1032446.p1	5.275	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	-130356	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-139433	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-276048	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	179128	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	179626	-	NM_001135816 BC142999	179704	+	BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.389658	CTCF.p2:-6:0.390
chr15	33508611	33508702	reg1024014.p1	5.275	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-148421	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-497490	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-498399	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	94513	+	TSC_hg19_v1_chr15_-_34212524 BC037796	703902	-	AK095198 NM_012125	752432	+	NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5	0.784136	CTCF.p2:-3:0.784
chr17	4280634	4280815	reg1025777.p2	5.275	+	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	-10816	-	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	-11013	-	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	-113573	-	AK172832 NM_182538 TSC_hg19_v1_chr17_+_4337247 BC023646	56518	+	NM_001124758 BC041772 TSC_hg19_v1_chr17_+_4402177 AB441165	121512	+	EU832503 BC050546 TSC_hg19_v1_chr17_-_4458680 AF147709 AK303150 AK301622 AK307948 NM_001105538 NM_014520	177950	-	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK172832|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_182538|SPNS3|201305|spinster homolog 3 (Drosophila)##BC023646|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_001124758|SPNS2|124976|spinster homolog 2 (Drosophila)##BC041772|SPNS2|124976|spinster homolog 2 (Drosophila)##AB441165|SPNS2|124976|spinster homolog 2 (Drosophila)##EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a##BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a##AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a##AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a##AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a##AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a	0.0	
chr2	127822382	127822562	reg1024006.p2	5.275	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-408680	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-408765	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-3039608	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	42269	-	BC039307 NM_001001665	140870	-	AK131190 TSC_hg19_v1_chr2_-_127977781	155245	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.0	
chr9	3524677	3524804	reg1027058.p2	5.275	+	AK127804 TSC_hg19_v1_chr9_-_3223066	-301704	-	TSC_hg19_v1_chr9_-_2844102 AK315531 NM_014878	-680627	-	TSC_hg19_v1_chr9_-_2844084 AL832245 AK225953 AL832239	-680651	-	TSC_hg19_v1_chr9_-_3525889 AK310956 AK289540	1099	-	TSC_hg19_v1_chr9_-_3525983 BC022191 NM_002919 NM_134428	1264	-	TSC_hg19_v1_chr9_+_3526079 AK125504	1348	+	AK315531|KIAA0020|9933|KIAA0020##NM_014878|KIAA0020|9933|KIAA0020##AL832245|KIAA0020|9933|KIAA0020##AK225953|KIAA0020|9933|KIAA0020##AL832239|KIAA0020|9933|KIAA0020##AK310956|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK289540|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##BC022191|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_002919|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_134428|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)	0.0	
chrX	15948851	15948995	reg1028464.p1	5.275	+	TSC_hg19_v1_chrX_-_15873104 NM_003916	-75820	-	AK130075 TSC_hg19_v1_chrX_-_15872938	-75985	-	TSC_hg19_v1_chrX_-_15872937 AK296135 AK299921 AK312594	-75994	-	NM_005314	192500	+	L13220 NM_004057 X65869 BC112174	719374	+	AK125332 NM_001144002	781416	-	NM_003916|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##NM_005314|GRPR|2925|gastrin-releasing peptide receptor##L13220|S100G|795|S100 calcium binding protein G##NM_004057|S100G|795|S100 calcium binding protein G##X65869|S100G|795|S100 calcium binding protein G##BC112174|S100G|795|S100 calcium binding protein G##AK125332|CTPS2|56474|CTP synthase II##NM_001144002|CTPS2|56474|CTP synthase II	0.581617	CTCF.p2:-26:0.582
chr12	40719306	40719427	reg1021448.p1	5.274	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	-100507	+	TSC_hg19_v1_chr12_-_40499870 BC047507	-219494	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	-219677	-	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	366916	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	862842	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	1112221	+	NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4	0.954365	CTCF.p2:-27:0.954
chr15	23216887	23217013	reg1027472.p2	5.274	+	DQ309040 BC048987 TSC_hg19_v1_chr15_-_23208467	-8539	-	TSC_hg19_v1_chr15_-_23115247 BC044583	-101702	-	BC025678 NM_001142275	-130108	-	TSC_hg19_v1_chr15_-_23378205 AK308640	161240	-	TSC_hg19_v1_chr15_-_23378229 AF041081 AF041080	161294	-	NM_005664	593503	+	DQ309040|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC048987|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC044583|LOC283683|283683|uncharacterized LOC283683##BC025678|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##NM_001142275|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##AK308640|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041080|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##NM_005664|MKRN3|7681|makorin ring finger protein 3	0.575118	CTCF.p2:8:0.575
chr5	160112843	160112939	reg1023132.p1	5.274	+	AK025130 TSC_hg19_v1_chr5_-_160112393	-552	-	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-263988	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-264037	+	AB018258 AK295081 AK090832 AX746642 NM_025153	166240	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	862235	-	NM_000811	999766	+	AK025130|ATP10B|23120|ATPase, class V, type 10B##BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6	1.528973	CTCF.p2:-20:0.935	CTCF.p2:50:0.594
chr10	115847124	115847304	reg1021328.p1	5.273	+	NM_000684 J03019	-43405	+	TSC_hg19_v1_chr10_+_115614419 NM_198514 AK090631 AX746547	-232795	+	D42045 NM_014881 AK307187	-233298	-	TSC_hg19_v1_chr10_-_115933963 BC100670 BC103499 BC103504 BC105632 BC152306 BC107430 BC070368 BX537964 AK307517 AK092620 AX747632 BC020842 BC030557	86718	-	NM_018017	87149	-	AK122916 AL833340 NM_198795 BX648664 BC063133	91857	+	NM_000684|ADRB1|153|adrenergic, beta-1-, receptor##J03019|ADRB1|153|adrenergic, beta-1-, receptor##NM_198514|NHLRC2|374354|NHL repeat containing 2##AK090631|NHLRC2|374354|NHL repeat containing 2##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A##BC100670|C10orf118|55088|chromosome 10 open reading frame 118##BC103499|C10orf118|55088|chromosome 10 open reading frame 118##BC103504|C10orf118|55088|chromosome 10 open reading frame 118##BC105632|C10orf118|55088|chromosome 10 open reading frame 118##BC152306|C10orf118|55088|chromosome 10 open reading frame 118##BC107430|C10orf118|55088|chromosome 10 open reading frame 118##BC070368|C10orf118|55088|chromosome 10 open reading frame 118##BX537964|C10orf118|55088|chromosome 10 open reading frame 118##AK307517|C10orf118|55088|chromosome 10 open reading frame 118##AK092620|C10orf118|55088|chromosome 10 open reading frame 118##BC020842|C10orf118|55088|chromosome 10 open reading frame 118##BC030557|C10orf118|55088|chromosome 10 open reading frame 118##NM_018017|C10orf118|55088|chromosome 10 open reading frame 118##AK122916|TDRD1|56165|tudor domain containing 1##AL833340|TDRD1|56165|tudor domain containing 1##NM_198795|TDRD1|56165|tudor domain containing 1##BX648664|TDRD1|56165|tudor domain containing 1##BC063133|TDRD1|56165|tudor domain containing 1	0.029233	
chr4	1339807	1339920	reg1027908.p1	5.273	+	TSC_hg19_v1_chr4_+_1283693 AK296174 AK022515 AY236486 AK308901 AF084928 BC006470 AY189687 BT006957	-56157	+	TSC_hg19_v1_chr4_+_1283678 BC001225 NM_001017405 NM_005882 AK001088 AK022586 AK094253 AK300572	-56193	+	TSC_hg19_v1_chr4_+_1243060 AK125775 AK056133	-96695	+	TSC_hg19_v1_chr4_+_1341031 BC110331 AB040963 NM_020894 BC140901	1405	+	AK126919 NM_175918	45476	+	BC070112 NM_001013622 BC042071 NM_001174070	345989	-	AK296174|MAEA|10296|macrophage erythroblast attacher##AK022515|MAEA|10296|macrophage erythroblast attacher##AY236486|MAEA|10296|macrophage erythroblast attacher##AK308901|MAEA|10296|macrophage erythroblast attacher##AF084928|MAEA|10296|macrophage erythroblast attacher##BC006470|MAEA|10296|macrophage erythroblast attacher##AY189687|MAEA|10296|macrophage erythroblast attacher##BT006957|MAEA|10296|macrophage erythroblast attacher##BC001225|MAEA|10296|macrophage erythroblast attacher##NM_001017405|MAEA|10296|macrophage erythroblast attacher##NM_005882|MAEA|10296|macrophage erythroblast attacher##AK001088|MAEA|10296|macrophage erythroblast attacher##AK022586|MAEA|10296|macrophage erythroblast attacher##AK094253|MAEA|10296|macrophage erythroblast attacher##AK300572|MAEA|10296|macrophage erythroblast attacher##AK125775|C4orf42|92070|chromosome 4 open reading frame 42##AK056133|C4orf42|92070|chromosome 4 open reading frame 42##BC110331|KIAA1530|57654|KIAA1530##AB040963|KIAA1530|57654|KIAA1530##NM_020894|KIAA1530|57654|KIAA1530##BC140901|KIAA1530|57654|KIAA1530##AK126919|CRIPAK|285464|cysteine-rich PAK1 inhibitor##NM_175918|CRIPAK|285464|cysteine-rich PAK1 inhibitor##BC070112|FAM53A|152877|family with sequence similarity 53, member A##NM_001013622|FAM53A|152877|family with sequence similarity 53, member A##BC042071|FAM53A|152877|family with sequence similarity 53, member A##NM_001174070|FAM53A|152877|family with sequence similarity 53, member A	0.0	
chr12	121916867	121916947	reg1020886.p2	5.272	+	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	-11833	-	AF306709 TSC_hg19_v1_chr12_+_121837931 NM_025126 NM_194271 AK025439 AK225285 AK304366 BC007826 BC039029 BC046174 BC029038	-78943	+	AK025614 NM_001137559	-124896	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	101352	-	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	102007	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	147736	+	BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##AF306709|RNF34|80196|ring finger protein 34##NM_025126|RNF34|80196|ring finger protein 34##NM_194271|RNF34|80196|ring finger protein 34##AK025439|RNF34|80196|ring finger protein 34##AK225285|RNF34|80196|ring finger protein 34##BC007826|RNF34|80196|ring finger protein 34##BC039029|RNF34|80196|ring finger protein 34##BC046174|RNF34|80196|ring finger protein 34##AK025614|ANAPC5|51433|anaphase promoting complex subunit 5##NM_001137559|ANAPC5|51433|anaphase promoting complex subunit 5##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1	0.824758	CTCF.p2:0:0.825
chr1	215883843	215883972	reg1026955.p2	5.272	+	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	-143044	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	-627297	+	NM_001017424	-705023	+	AF055580 AY481573 NM_007123 NM_206933	712830	-	HQ692853 AF117255 BC008218 AY388456 AK291647 TSC_hg19_v1_chr1_-_216896791 AB020639 AK290945 BC064700 NM_001243515 NM_001243518 NM_001243519 NM_001438	1012819	-	AY388461 NM_001243514	1094801	-	BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2##AF055580|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##AY481573|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_007123|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_206933|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##HQ692853|ESRRG|2104|estrogen-related receptor gamma##AF117255|ESRRG|2104|estrogen-related receptor gamma##BC008218|ESRRG|2104|estrogen-related receptor gamma##AY388456|ESRRG|2104|estrogen-related receptor gamma##AK291647|ESRRG|2104|estrogen-related receptor gamma##AB020639|ESRRG|2104|estrogen-related receptor gamma##AK290945|ESRRG|2104|estrogen-related receptor gamma##BC064700|ESRRG|2104|estrogen-related receptor gamma##NM_001243515|ESRRG|2104|estrogen-related receptor gamma##NM_001243518|ESRRG|2104|estrogen-related receptor gamma##NM_001243519|ESRRG|2104|estrogen-related receptor gamma##NM_001438|ESRRG|2104|estrogen-related receptor gamma##AY388461|ESRRG|2104|estrogen-related receptor gamma##NM_001243514|ESRRG|2104|estrogen-related receptor gamma	0.994944	CTCF.p2:-13:0.995
chr12	74505639	74505758	reg1025507.p2	5.272	+	TSC_hg19_v1_chr12_-_72667288 BC040230	-1838428	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	-1839194	+	AK095156 TSC_hg19_v1_chr12_-_72666355	-1839355	-	NM_001136262 TSC_hg19_v1_chr12_+_74931614 AK056642	425887	+	TSC_hg19_v1_chr12_+_74931622 BC009111 AL713650	425941	+	AK054742 TSC_hg19_v1_chr12_+_74933681	427922	+	BC040230|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AK095156|LOC283392|283392|uncharacterized LOC283392##NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B##AK056642|ATXN7L3B|552889|ataxin 7-like 3B##BC009111|ATXN7L3B|552889|ataxin 7-like 3B##AL713650|ATXN7L3B|552889|ataxin 7-like 3B	0.0	
chr14	31889888	31890058	reg1026197.p2	5.272	+	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	-212	-	TSC_hg19_v1_chr14_-_31676920 BC016947	-213038	-	TSC_hg19_v1_chr14_-_31676690 NM_015382	-213288	-	TSC_hg19_v1_chr14_-_31926633 BC010618 AK302829 AK055367 NM_080664	36702	-	GQ981321 GQ981322 NM_001197184	67177	-	TSC_hg19_v1_chr14_+_32030642 NM_025152 AK316445 BX248028 AK295326 BC024919 AK022722 CU692938	140684	+	BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A##NM_015382|HECTD1|25831|HECT domain containing 1##BC010618|C14orf126|112487|chromosome 14 open reading frame 126##AK055367|C14orf126|112487|chromosome 14 open reading frame 126##NM_080664|C14orf126|112487|chromosome 14 open reading frame 126##GQ981321|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##GQ981322|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##NM_001197184|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##NM_025152|NUBPL|80224|nucleotide binding protein-like##AK316445|NUBPL|80224|nucleotide binding protein-like##BX248028|NUBPL|80224|nucleotide binding protein-like##AK295326|NUBPL|80224|nucleotide binding protein-like##BC024919|NUBPL|80224|nucleotide binding protein-like##AK022722|NUBPL|80224|nucleotide binding protein-like	0.0	
chr5	18314422	18314550	reg1026620.p2	5.272	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-1096646	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-1096874	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-1378101	-	AK295087 BC031051 NM_001167667 NM_004934	1673836	-	TSC_hg19_v1_chr5_+_21459621 AK290693	3145123	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	3145162	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.999826	CTCF.p2:2:1.000
chr8	73067368	73067480	reg1000945.p1	5.272	+	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	-79590	-	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-310716	-	AF060154 TSC_hg19_v1_chr8_-_72756646	-310796	-	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	382219	+	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	853688	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	938018	-	NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##AF060154|MSC|9242|musculin##AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84	0.0	
chr12	66429207	66429370	reg1028109.p1	5.271	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	-210275	+	TSC_hg19_v1_chr12_+_66218605 AK311399	-210681	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	-211081	+	TSC_hg19_v1_chr12_-_66524536 BC070232 BC006002 BC107780 AK091568 AX747065 NM_032338	95237	-	AB464309 TSC_hg19_v1_chr12_-_66563773 AF182414 AF161526 BC020613 AF113127 AK301359 AF182041 AK075069 AK225158 BC070366 BC052273 BC094852	134466	-	TSC_hg19_v1_chr12_-_66563806 BC004401 NM_016056	134514	-	AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##BC070232|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC006002|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC107780|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AK091568|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##NM_032338|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AF182414|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF161526|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC020613|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF113127|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF182041|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK075069|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK225158|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC070366|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC052273|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC094852|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC004401|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##NM_016056|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4	0.0	
chr14	40425717	40425851	reg1025428.p2	5.271	+	BC053537 BC068566 BC030611 NM_203301	-524123	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-524427	-	TSC_hg19_v1_chr14_+_39736592 BC039017 AK315254 BC029513 BC051363 U73682	-689211	+	NM_152447 AK096627	1650983	+	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	4550691	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	4940714	+	BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##BC039017|CTAGE5|4253|CTAGE family, member 5##AK315254|CTAGE5|4253|CTAGE family, member 5##BC029513|CTAGE5|4253|CTAGE family, member 5##BC051363|CTAGE5|4253|CTAGE family, member 5##U73682|CTAGE5|4253|CTAGE family, member 5##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28	0.785332	CTCF.p2:-19:0.760
chr16	69345150	69345263	reg1024423.p2	5.271	+	TSC_hg19_v1_chr16_+_69221066 BC031058 AF243385 NM_006750 U40572 BC048215 EU831451 EU831538	-124178	+	TSC_hg19_v1_chr16_+_69166551 AK027634 AK027675 AK310104 AB075868 BC009348	-178653	+	TSC_hg19_v1_chr16_+_69166532 BX647265 AK074795	-178679	+	TSC_hg19_v1_chr16_+_69345258 AK315026 AF132747 AF159063 AF255952 NM_013245 BC047932 AF112215 CU690536 EU831747	126	+	TSC_hg19_v1_chr16_-_69364492 AF322879 BC019912 AF239156 NM_022341	19286	-	TSC_hg19_v1_chr16_-_69373468 BC063831	28231	-	BC031058|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##AF243385|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##NM_006750|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##U40572|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##BC048215|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##EU831451|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##EU831538|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##AK027634|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK027675|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK310104|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AB075868|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##BC009348|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##BX647265|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK074795|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK315026|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF132747|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF159063|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF255952|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##NM_013245|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##BC047932|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF112215|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##EU831747|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF322879|PDF|64146|peptide deformylase (mitochondrial)##BC019912|PDF|64146|peptide deformylase (mitochondrial)##AF239156|PDF|64146|peptide deformylase (mitochondrial)##NM_022341|PDF|64146|peptide deformylase (mitochondrial)##BC063831|COG8|84342|component of oligomeric golgi complex 8	0.964609	CTCF.p2:-5:0.965
chr20	25262267	25262448	reg1025008.p2	5.271	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	-33599	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	-85877	+	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	-85987	+	CU680756 AK075023 AK290815 AK293495 TSC_hg19_v1_chr20_-_25371426	109028	-	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	109169	-	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	125965	+	NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK075023|ABHD12|26090|abhydrolase domain containing 12##AK290815|ABHD12|26090|abhydrolase domain containing 12##AK293495|ABHD12|26090|abhydrolase domain containing 12##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	0.0	
chr20	9439132	9439278	reg1026243.p2	5.271	+	NM_000933 AB384821	-150752	+	NM_182797 BC117458 BC143868	-241147	+	AK307482 TSC_hg19_v1_chr20_+_9049806	-389407	+	TSC_hg19_v1_chr20_+_9458460 AK057634	19308	+	TSC_hg19_v1_chr20_+_9494997 AK295336 AK316114 NM_001199897 NM_012261	55794	+	AL121740 BC050727 TSC_hg19_v1_chr20_+_9495326	56107	+	NM_000933|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##AK057634|PLCB4|5332|phospholipase C, beta 4##AK295336|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AK316114|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_001199897|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_012261|LAMP5|24141|lysosomal-associated membrane protein family, member 5##AL121740|LAMP5|24141|lysosomal-associated membrane protein family, member 5##BC050727|LAMP5|24141|lysosomal-associated membrane protein family, member 5	0.113741	
chr3	60740993	60741104	reg1027210.p1	5.271	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-1705288	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-1705307	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-1705340	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	496042	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	806163	+	BC047734 TSC_hg19_v1_chr3_+_61547294	806238	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.94165	CTCF.p2:0:0.942
chr5	68180860	68180994	reg1031231.p1	5.271	+	AK094785 NM_001242466 AK294919	-592475	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-594381	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-596633	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	208876	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	208955	+	AK292925 TSC_hg19_v1_chr5_+_68389913	208986	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.019438	
chr12	11659552	11659732	reg1027153.p2	5.270	+	BC044827 NM_006248	-111151	-	BC044827 K03205 K03206 BC141917 K03204 NM_005039 NM_199353 NM_199354 AX772842	-151126	-	BC130386 BC035362 K03207 NM_002723 BC128191	-196282	-	TSC_hg19_v1_chr12_+_11802659 AK289441	143031	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	143132	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	143344	+	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2##BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##K03205|PRB1|5542|proline-rich protein BstNI subfamily 1##K03206|PRB1|5542|proline-rich protein BstNI subfamily 1##BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1##K03204|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1##BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4##BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4##K03207|PRB4|5545|proline-rich protein BstNI subfamily 4##NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4##BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4##AK289441|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6	0.996681	CTCF.p2:11:0.997
chr17	63096507	63096688	reg1007865.p2	5.270	+	TSC_hg19_v1_chr17_-_63052903 AK301699 NM_006572	-43696	-	BC011925 TSC_hg19_v1_chr17_-_63052851	-43764	-	TSC_hg19_v1_chr17_-_63052756 L22075 BC036756	-43837	-	NM_001081955 NM_001165933 NM_003835 TSC_hg19_v1_chr17_+_63133479	36873	+	TSC_hg19_v1_chr17_+_63133501 AK309061 AK290535 BC022504 AK301719 AF071476 AK289876 AF493933 AY585191	36982	+	BC006295 TSC_hg19_v1_chr17_-_63556453	459878	-	AK301699|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_006572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##L22075|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC036756|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_001081955|RGS9|8787|regulator of G-protein signaling 9##NM_001165933|RGS9|8787|regulator of G-protein signaling 9##NM_003835|RGS9|8787|regulator of G-protein signaling 9##AK309061|RGS9|8787|regulator of G-protein signaling 9##AK290535|RGS9|8787|regulator of G-protein signaling 9##BC022504|RGS9|8787|regulator of G-protein signaling 9##AK301719|RGS9|8787|regulator of G-protein signaling 9##AF071476|RGS9|8787|regulator of G-protein signaling 9##AK289876|RGS9|8787|regulator of G-protein signaling 9##AF493933|RGS9|8787|regulator of G-protein signaling 9##AY585191|RGS9|8787|regulator of G-protein signaling 9##BC006295|AXIN2|8313|axin 2	0.0	
chr22	50805113	50805229	reg1026901.p1	5.270	+	AB014585 TSC_hg19_v1_chr22_+_50781776 BC041698 AK302472	-23368	+	TSC_hg19_v1_chr22_+_50781755 NM_001242898 NM_001242899 NM_001242900 NM_014678 BC032664 BC006568 BC052995	-23428	+	AK054743 AK022407 BC031069 NM_001001794	-39725	-	BC046169 TSC_hg19_v1_chr22_-_50893787 BC056915	88595	-	EU831421 EU831514 BC111424 BC087612 TSC_hg19_v1_chr22_-_50913465 BC040031 AK057985 NM_002972	108217	-	TSC_hg19_v1_chr22_+_50919971 AK024788 AK225097 NM_024866 AB236970 NM_001253845 AK090635 AB463404 AB121034 AF529213	114952	+	AB014585|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC041698|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##AK302472|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242898|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242899|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242900|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_014678|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC032664|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC006568|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC052995|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##AK054743|FAM116B|414918|family with sequence similarity 116, member B##BC031069|FAM116B|414918|family with sequence similarity 116, member B##NM_001001794|FAM116B|414918|family with sequence similarity 116, member B##BC046169|SBF1|6305|SET binding factor 1##BC056915|SBF1|6305|SET binding factor 1##EU831421|SBF1|6305|SET binding factor 1##EU831514|SBF1|6305|SET binding factor 1##BC087612|SBF1|6305|SET binding factor 1##BC040031|SBF1|6305|SET binding factor 1##AK057985|SBF1|6305|SET binding factor 1##NM_002972|SBF1|6305|SET binding factor 1##AK024788|ADM2|79924|adrenomedullin 2##NM_024866|ADM2|79924|adrenomedullin 2##AB236970|ADM2|79924|adrenomedullin 2##NM_001253845|ADM2|79924|adrenomedullin 2##AK090635|ADM2|79924|adrenomedullin 2##AB121034|ADM2|79924|adrenomedullin 2##AF529213|ADM2|79924|adrenomedullin 2	0.942665	CTCF.p2:0:0.943
chr3	183846956	183847084	reg1024969.p1	5.270	+	AY159813 NM_182589 BC101182 BC101183 BC101184 BC101185 AY349353 EU165354	-28957	+	AF459285 NM_130770 BC131799	-76182	+	AJ437318 NM_001163646	-96402	+	BC053646 NM_003907 BC050476	5797	+	AK091646 AX747110 BC013590 TSC_hg19_v1_chr3_+_183853147 AL832179 AK307347	6091	+	TSC_hg19_v1_chr3_+_183853169 AK310207 AB208821 DQ891483 DQ894670	6147	+	AY159813|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E##NM_182589|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E##BC101182|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E##BC101183|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E##BC101184|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E##BC101185|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E##AY349353|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E##EU165354|HTR3E|285242|5-hydroxytryptamine (serotonin) receptor 3, family member E##AF459285|HTR3C|170572|5-hydroxytryptamine (serotonin) receptor 3, family member C##NM_130770|HTR3C|170572|5-hydroxytryptamine (serotonin) receptor 3, family member C##BC131799|HTR3C|170572|5-hydroxytryptamine (serotonin) receptor 3, family member C##AJ437318|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D##NM_001163646|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D##BC053646|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##NM_003907|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##BC050476|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##AK091646|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##BC013590|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##AL832179|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##AK307347|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##AK310207|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##AB208821|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##DQ891483|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##DQ894670|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa	0.174776	
chr6	15287985	15288165	reg1027844.p1	5.270	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-38962	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-39174	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-41663	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	375102	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	375215	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	841227	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.0	
chr1	151371821	151372001	reg1024430.p1	5.269	+	AK310044 BC009084 NM_003944 TSC_hg19_v1_chr1_-_151345182 AK303815 AK296661 AK309264 AK315643 AK023875 AK298355 BC032997	-26742	-	TSC_hg19_v1_chr1_-_151319726 AK312289 AK302891 NM_000449 NM_001025603 AK311525	-52168	-	TSC_hg19_v1_chr1_-_151319685 X85786 BC017471	-52223	-	TSC_hg19_v1_chr1_+_151372038 AK313825 AK294149 D26600 NM_002796 BC008314 BC010088 BC010098 BC011768 BC012168 BC017451 BC017486 BC000331 AB464086 BT006917 CR456820 CU675936 CU678915 CU679615 CU680252 DQ890748 DQ892020 DQ895212 S71381	129	+	TSC_hg19_v1_chr1_-_151414644 AB007930 AB463182 NM_207171 CU691222	42750	-	TSC_hg19_v1_chr1_-_151431656 BX649163 AB037911 AB075477 AK000199 AK300307 BC057773 BX537561 AK299791 AK302501	59765	-	AK310044|SELENBP1|8991|selenium binding protein 1##BC009084|SELENBP1|8991|selenium binding protein 1##NM_003944|SELENBP1|8991|selenium binding protein 1##AK303815|SELENBP1|8991|selenium binding protein 1##AK296661|SELENBP1|8991|selenium binding protein 1##AK309264|SELENBP1|8991|selenium binding protein 1##AK315643|SELENBP1|8991|selenium binding protein 1##AK023875|SELENBP1|8991|selenium binding protein 1##AK298355|SELENBP1|8991|selenium binding protein 1##BC032997|SELENBP1|8991|selenium binding protein 1##AK312289|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##AK302891|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##NM_000449|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##NM_001025603|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##AK311525|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##X85786|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##BC017471|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##AK313825|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##AK294149|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##D26600|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##NM_002796|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC008314|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC010088|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC010098|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC011768|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC012168|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC017451|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC017486|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BC000331|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##BT006917|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##CR456820|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##DQ890748|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##DQ892020|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##DQ895212|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##S71381|PSMB4|5692|proteasome (prosome, macropain) subunit, beta type, 4##AB007930|POGZ|23126|pogo transposable element with ZNF domain##NM_207171|POGZ|23126|pogo transposable element with ZNF domain##BX649163|POGZ|23126|pogo transposable element with ZNF domain##AB037911|POGZ|23126|pogo transposable element with ZNF domain##AB075477|POGZ|23126|pogo transposable element with ZNF domain##AK000199|POGZ|23126|pogo transposable element with ZNF domain##AK300307|POGZ|23126|pogo transposable element with ZNF domain##BC057773|POGZ|23126|pogo transposable element with ZNF domain##BX537561|POGZ|23126|pogo transposable element with ZNF domain##AK299791|POGZ|23126|pogo transposable element with ZNF domain##AK302501|POGZ|23126|pogo transposable element with ZNF domain	0.0	
chr17	80666081	80666254	reg1025887.p2	5.269	+	TSC_hg19_v1_chr17_-_80656575 BC035814 U05227 AB209711 BC018039 NM_006822	-9633	-	TSC_hg19_v1_chr17_-_80606321 AK297477 BC000974 AM182326 AB464355 BC007838 NM_019613	-59884	-	TSC_hg19_v1_chr17_+_80477607 NM_004514	-188577	+	TSC_hg19_v1_chr17_+_80674622 NM_024619 AK293523 AK301958 AK315373 BC007611 AK022233 AL136631 AY360465 BC014408 AB385548 CU676977 CR533461	8439	+	TSC_hg19_v1_chr17_+_80693490 NM_022158 AK294871 BC042680 AJ404615 CU692116	27295	+	TSC_hg19_v1_chr17_+_80709949 BC003094 NM_005993 AB023205 AK293471 BC006364	43787	+	BC035814|RAB40B|10966|RAB40B, member RAS oncogene family##U05227|RAB40B|10966|RAB40B, member RAS oncogene family##AB209711|RAB40B|10966|RAB40B, member RAS oncogene family##BC018039|RAB40B|10966|RAB40B, member RAS oncogene family##NM_006822|RAB40B|10966|RAB40B, member RAS oncogene family##AK297477|WDR45L|56270|WDR45-like##BC000974|WDR45L|56270|WDR45-like##AM182326|WDR45L|56270|WDR45-like##BC007838|WDR45L|56270|WDR45-like##NM_019613|WDR45L|56270|WDR45-like##NM_004514|FOXK2|3607|forkhead box K2##NM_024619|FN3KRP|79672|fructosamine 3 kinase related protein##AK293523|FN3KRP|79672|fructosamine 3 kinase related protein##AK301958|FN3KRP|79672|fructosamine 3 kinase related protein##AK315373|FN3KRP|79672|fructosamine 3 kinase related protein##BC007611|FN3KRP|79672|fructosamine 3 kinase related protein##AK022233|FN3KRP|79672|fructosamine 3 kinase related protein##AL136631|FN3KRP|79672|fructosamine 3 kinase related protein##AY360465|FN3KRP|79672|fructosamine 3 kinase related protein##BC014408|FN3KRP|79672|fructosamine 3 kinase related protein##CR533461|FN3KRP|79672|fructosamine 3 kinase related protein##NM_022158|FN3K|64122|fructosamine 3 kinase##AK294871|FN3K|64122|fructosamine 3 kinase##BC042680|FN3K|64122|fructosamine 3 kinase##AJ404615|FN3K|64122|fructosamine 3 kinase##BC003094|TBCD|6904|tubulin folding cofactor D##NM_005993|TBCD|6904|tubulin folding cofactor D##AB023205|TBCD|6904|tubulin folding cofactor D##AK293471|TBCD|6904|tubulin folding cofactor D##BC006364|TBCD|6904|tubulin folding cofactor D	0.0	
chr18	28579286	28579403	reg1024827.p1	5.269	+	TSC_hg19_v1_chr18_-_25757363 NM_001792	-2821947	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	-2822307	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-3814111	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	43358	-	CR749226 TSC_hg19_v1_chr18_-_28681542	102144	-	TSC_hg19_v1_chr18_-_28682275 EF017811 EF017812 X56807 AK297029 AK290313 BX648425 BC063291 NM_004949 NM_024422	102847	-	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3##CR749226|DSC2|1824|desmocollin 2##EF017811|DSC2|1824|desmocollin 2##EF017812|DSC2|1824|desmocollin 2##X56807|DSC2|1824|desmocollin 2##AK297029|DSC2|1824|desmocollin 2##AK290313|DSC2|1824|desmocollin 2##BX648425|DSC2|1824|desmocollin 2##BC063291|DSC2|1824|desmocollin 2##NM_004949|DSC2|1824|desmocollin 2##NM_024422|DSC2|1824|desmocollin 2	0.178194	
chr20	44452981	44453104	reg1028189.p1	5.269	+	NM_181801	-11371	+	BT007300 BT020165 BT020166 CR456988 DQ892416 DQ895630 EU831629 EU831714 TSC_hg19_v1_chr20_+_44441336	-11703	+	AK311949 NM_007019 NM_181799 NM_181800 NM_181802 NM_181803 BC050736 TSC_hg19_v1_chr20_+_44441282 BC016292 BC007656 U73379 BC028161	-11761	+	M22307 AK291323 AK300665 BC005323 X07898 TSC_hg19_v1_chr20_-_44455952 NM_003279	2900	-	TSC_hg19_v1_chr20_+_44462489 AK293443 BC012904 NM_001042632 NM_001042633 NM_033421 NM_152897 AF523834 AL591562 BC019823 AF395845	9434	+	TSC_hg19_v1_chr20_+_44462788 AK297622 AK095851	9778	+	NM_181801|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BT007300|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BT020165|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BT020166|UBE2C|11065|ubiquitin-conjugating enzyme E2C##CR456988|UBE2C|11065|ubiquitin-conjugating enzyme E2C##DQ892416|UBE2C|11065|ubiquitin-conjugating enzyme E2C##DQ895630|UBE2C|11065|ubiquitin-conjugating enzyme E2C##EU831629|UBE2C|11065|ubiquitin-conjugating enzyme E2C##EU831714|UBE2C|11065|ubiquitin-conjugating enzyme E2C##AK311949|UBE2C|11065|ubiquitin-conjugating enzyme E2C##NM_007019|UBE2C|11065|ubiquitin-conjugating enzyme E2C##NM_181799|UBE2C|11065|ubiquitin-conjugating enzyme E2C##NM_181800|UBE2C|11065|ubiquitin-conjugating enzyme E2C##NM_181802|UBE2C|11065|ubiquitin-conjugating enzyme E2C##NM_181803|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BC050736|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BC016292|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BC007656|UBE2C|11065|ubiquitin-conjugating enzyme E2C##U73379|UBE2C|11065|ubiquitin-conjugating enzyme E2C##BC028161|UBE2C|11065|ubiquitin-conjugating enzyme E2C##M22307|TNNC2|7125|troponin C type 2 (fast)##AK291323|TNNC2|7125|troponin C type 2 (fast)##AK300665|TNNC2|7125|troponin C type 2 (fast)##BC005323|TNNC2|7125|troponin C type 2 (fast)##X07898|TNNC2|7125|troponin C type 2 (fast)##NM_003279|TNNC2|7125|troponin C type 2 (fast)##AK293443|SNX21|90203|sorting nexin family member 21##BC012904|SNX21|90203|sorting nexin family member 21##NM_001042632|SNX21|90203|sorting nexin family member 21##NM_001042633|SNX21|90203|sorting nexin family member 21##NM_033421|SNX21|90203|sorting nexin family member 21##NM_152897|SNX21|90203|sorting nexin family member 21##AF523834|SNX21|90203|sorting nexin family member 21##AL591562|SNX21|90203|sorting nexin family member 21##BC019823|SNX21|90203|sorting nexin family member 21##AF395845|SNX21|90203|sorting nexin family member 21##AK297622|SNX21|90203|sorting nexin family member 21##AK095851|SNX21|90203|sorting nexin family member 21	0.813019	CTCF.p2:15:0.813
chr8	91522264	91522377	reg1025823.p1	5.269	+	AB529128 X06661 BC006478 AK054881 AK312491 BC020864 NM_004929	-427305	-	NM_001359 BC105080 BC105082 BC143669 TSC_hg19_v1_chr8_+_91013704 AK300069 L26050	-508671	+	TSC_hg19_v1_chr8_-_90996896 AK001017 AK289848 BC071590 BC040519 BX640816 NM_002485 AK312410	-525416	-	AK300583 AK123958 AL834364 TSC_hg19_v1_chr8_-_91657856	135478	-	TSC_hg19_v1_chr8_-_91657970 AY147881 NM_001008495 NM_001146273	135695	-	AF414126 TSC_hg19_v1_chr8_+_91803956 NM_022351 AK095533 BC068448 AY224210	281625	+	X06661|CALB1|793|calbindin 1, 28kDa##BC006478|CALB1|793|calbindin 1, 28kDa##AK054881|CALB1|793|calbindin 1, 28kDa##AK312491|CALB1|793|calbindin 1, 28kDa##BC020864|CALB1|793|calbindin 1, 28kDa##NM_004929|CALB1|793|calbindin 1, 28kDa##NM_001359|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105080|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105082|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC143669|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK300069|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##L26050|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK001017|NBN|4683|nibrin##AK289848|NBN|4683|nibrin##BC071590|NBN|4683|nibrin##BC040519|NBN|4683|nibrin##BX640816|NBN|4683|nibrin##NM_002485|NBN|4683|nibrin##AK312410|NBN|4683|nibrin##AK300583|TMEM64|169200|transmembrane protein 64##AK123958|TMEM64|169200|transmembrane protein 64##AL834364|TMEM64|169200|transmembrane protein 64##AY147881|TMEM64|169200|transmembrane protein 64##NM_001008495|TMEM64|169200|transmembrane protein 64##NM_001146273|TMEM64|169200|transmembrane protein 64##AF414126|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##NM_022351|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AK095533|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##BC068448|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AY224210|NECAB1|64168|N-terminal EF-hand calcium binding protein 1	0.74043	CTCF.p2:33:0.740
chrX	53313953	53314073	reg1029961.p1	5.269	+	TSC_hg19_v1_chrX_-_53310765 BC038213 BC108674 FJ154891 FJ154890 AK095232 NM_001243197 NM_015075	-3214	-	L25270 NM_001146702 NM_004187 TSC_hg19_v1_chrX_-_53254729	-59347	-	BC054499 BC047751 TSC_hg19_v1_chrX_-_53254393 AK308077 AK304732	-59626	-	AB011094 NM_001111125 TSC_hg19_v1_chrX_-_53350549	36536	-	BX640922 TSC_hg19_v1_chrX_-_53449153	135130	-	D80000 AB385291 HQ258690 AF176781 S78271 TSC_hg19_v1_chrX_-_53449604 BC046147 AK301266 BC064368	135564	-	BC038213|IQSEC2|23096|IQ motif and Sec7 domain 2##BC108674|IQSEC2|23096|IQ motif and Sec7 domain 2##FJ154891|IQSEC2|23096|IQ motif and Sec7 domain 2##FJ154890|IQSEC2|23096|IQ motif and Sec7 domain 2##AK095232|IQSEC2|23096|IQ motif and Sec7 domain 2##NM_001243197|IQSEC2|23096|IQ motif and Sec7 domain 2##NM_015075|IQSEC2|23096|IQ motif and Sec7 domain 2##L25270|KDM5C|8242|lysine (K)-specific demethylase 5C##NM_001146702|KDM5C|8242|lysine (K)-specific demethylase 5C##NM_004187|KDM5C|8242|lysine (K)-specific demethylase 5C##BC054499|KDM5C|8242|lysine (K)-specific demethylase 5C##BC047751|KDM5C|8242|lysine (K)-specific demethylase 5C##AK308077|KDM5C|8242|lysine (K)-specific demethylase 5C##AK304732|KDM5C|8242|lysine (K)-specific demethylase 5C##AB011094|IQSEC2|23096|IQ motif and Sec7 domain 2##NM_001111125|IQSEC2|23096|IQ motif and Sec7 domain 2##BX640922|SMC1A|8243|structural maintenance of chromosomes 1A##D80000|SMC1A|8243|structural maintenance of chromosomes 1A##HQ258690|SMC1A|8243|structural maintenance of chromosomes 1A##AF176781|SMC1A|8243|structural maintenance of chromosomes 1A##S78271|SMC1A|8243|structural maintenance of chromosomes 1A##AK301266|SMC1A|8243|structural maintenance of chromosomes 1A##BC064368|SMC1A|8243|structural maintenance of chromosomes 1A	0.997923	CTCF.p2:-15:0.998
chr1	26136256	26136322	reg1045235.p1	5.268	+	TSC_hg19_v1_chr1_+_26126678 AJ306399 NM_020451 NM_206926	-9621	+	AB209275 TSC_hg19_v1_chr1_+_25944698	-191634	+	AF261655 NM_020379	-192331	+	TSC_hg19_v1_chr1_+_26146429 NM_001099625 NM_001099627 BX647921	10121	+	TSC_hg19_v1_chr1_+_26146468 AB075880 AK314297 AK299221 AF173891	10182	+	TSC_hg19_v1_chr1_+_26146696 AL512766 NM_019557	10376	+	AJ306399|SEPN1|57190|selenoprotein N, 1##NM_020451|SEPN1|57190|selenoprotein N, 1##NM_206926|SEPN1|57190|selenoprotein N, 1##AB209275|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_001099625|FAM54B|56181|family with sequence similarity 54, member B##NM_001099627|FAM54B|56181|family with sequence similarity 54, member B##BX647921|FAM54B|56181|family with sequence similarity 54, member B##AB075880|FAM54B|56181|family with sequence similarity 54, member B##AK314297|FAM54B|56181|family with sequence similarity 54, member B##AK299221|FAM54B|56181|family with sequence similarity 54, member B##AF173891|FAM54B|56181|family with sequence similarity 54, member B##AL512766|FAM54B|56181|family with sequence similarity 54, member B##NM_019557|FAM54B|56181|family with sequence similarity 54, member B	0.0	
chr18	47814387	47814567	reg1016668.p2	5.268	+	AB031069 AF149758 AK314886 TSC_hg19_v1_chr18_-_47814205 AK294645	-270	-	TSC_hg19_v1_chr18_-_47814047 BC002504 BC014940	-441	-	BC015733 AL136862 TSC_hg19_v1_chr18_-_47814017 BC009188	-465	-	BX647189 NM_001101654 NM_014593	214	-	TSC_hg19_v1_chr18_+_47901415 NM_001039535 NM_145060 BC015706 AK313968 AK303464	86920	+	TSC_hg19_v1_chr18_+_48086463 BC050299 NM_002747 AK293818 BC040493 AK295058	272020	+	AB031069|CXXC1|30827|CXXC finger protein 1##AF149758|CXXC1|30827|CXXC finger protein 1##AK314886|CXXC1|30827|CXXC finger protein 1##AK294645|CXXC1|30827|CXXC finger protein 1##BC002504|CXXC1|30827|CXXC finger protein 1##BC014940|CXXC1|30827|CXXC finger protein 1##BC015733|CXXC1|30827|CXXC finger protein 1##AL136862|CXXC1|30827|CXXC finger protein 1##BC009188|CXXC1|30827|CXXC finger protein 1##BX647189|CXXC1|30827|CXXC finger protein 1##NM_001101654|CXXC1|30827|CXXC finger protein 1##NM_014593|CXXC1|30827|CXXC finger protein 1##NM_001039535|SKA1|220134|spindle and kinetochore associated complex subunit 1##NM_145060|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC015706|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK313968|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK303464|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC050299|MAPK4|5596|mitogen-activated protein kinase 4##NM_002747|MAPK4|5596|mitogen-activated protein kinase 4##AK293818|MAPK4|5596|mitogen-activated protein kinase 4##BC040493|MAPK4|5596|mitogen-activated protein kinase 4##AK295058|MAPK4|5596|mitogen-activated protein kinase 4	0.0	
chr20	56169297	56169478	reg1003903.p1	5.268	+	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	-33230	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	-69186	-	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-202930	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	26151	-	TSC_hg19_v1_chr20_-_56285017 AF305616 AX775889 NM_020182	115602	-	TSC_hg19_v1_chr20_+_56285236 AK056098	115838	+	NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1##AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	0.0	
chr2	70914059	70914166	reg1026001.p1	5.268	+	NM_001099691 NM_003236	-132966	-	AK309220 AK309066 CU675103 BT006833 AF149096 AF149097 AF149098 X70340 K03222 M31172 AK290151 AK312899 BC005308 TSC_hg19_v1_chr2_-_70780995	-133304	-	AM393139 AB528755 AK225148 BC026293 TSC_hg19_v1_chr2_-_70529198 AL833147 BC014975 AK225151 AK309543 AK315877 AK027574 NM_032822	-384906	-	BC065525 NM_001185054	80734	-	TSC_hg19_v1_chr2_-_70995330 BC056881 BC051882 BC010237 BC041666 BC027876 AK297250 AK309773 AK291007 AB209227 AB593080 NM_001185055 NM_001617 NM_017482 NM_017488	81179	-	BC039536 AB463644 AY541030 NM_001004311	103640	-	NM_001099691|TGFA|7039|transforming growth factor, alpha##NM_003236|TGFA|7039|transforming growth factor, alpha##AK309220|TGFA|7039|transforming growth factor, alpha##AK309066|TGFA|7039|transforming growth factor, alpha##BT006833|TGFA|7039|transforming growth factor, alpha##AF149096|TGFA|7039|transforming growth factor, alpha##AF149097|TGFA|7039|transforming growth factor, alpha##AF149098|TGFA|7039|transforming growth factor, alpha##X70340|TGFA|7039|transforming growth factor, alpha##K03222|TGFA|7039|transforming growth factor, alpha##M31172|TGFA|7039|transforming growth factor, alpha##AK290151|TGFA|7039|transforming growth factor, alpha##AK312899|TGFA|7039|transforming growth factor, alpha##BC005308|TGFA|7039|transforming growth factor, alpha##AM393139|FAM136A|84908|family with sequence similarity 136, member A##AK225148|FAM136A|84908|family with sequence similarity 136, member A##BC026293|FAM136A|84908|family with sequence similarity 136, member A##AL833147|FAM136A|84908|family with sequence similarity 136, member A##BC014975|FAM136A|84908|family with sequence similarity 136, member A##AK225151|FAM136A|84908|family with sequence similarity 136, member A##AK309543|FAM136A|84908|family with sequence similarity 136, member A##AK315877|FAM136A|84908|family with sequence similarity 136, member A##AK027574|FAM136A|84908|family with sequence similarity 136, member A##NM_032822|FAM136A|84908|family with sequence similarity 136, member A##BC065525|ADD2|119|adducin 2 (beta)##NM_001185054|ADD2|119|adducin 2 (beta)##BC056881|ADD2|119|adducin 2 (beta)##BC051882|ADD2|119|adducin 2 (beta)##BC010237|ADD2|119|adducin 2 (beta)##BC041666|ADD2|119|adducin 2 (beta)##BC027876|ADD2|119|adducin 2 (beta)##AK297250|ADD2|119|adducin 2 (beta)##AK309773|ADD2|119|adducin 2 (beta)##AK291007|ADD2|119|adducin 2 (beta)##AB209227|ADD2|119|adducin 2 (beta)##AB593080|ADD2|119|adducin 2 (beta)##NM_001185055|ADD2|119|adducin 2 (beta)##NM_001617|ADD2|119|adducin 2 (beta)##NM_017482|ADD2|119|adducin 2 (beta)##NM_017488|ADD2|119|adducin 2 (beta)##BC039536|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##AY541030|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##NM_001004311|FIGLA|344018|folliculogenesis specific basic helix-loop-helix	0.914727	CTCF.p2:21:0.915
chr6	24934215	24934370	reg1028678.p1	5.268	+	AB002384 NM_014722	-23098	-	U49187 AK300138 BC001232 NM_015864	-56775	-	NM_001251991	-158652	+	TSC_hg19_v1_chr6_-_24936189 AK299047	1891	-	TSC_hg19_v1_chr6_+_25279316 BC040903	345026	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	345366	+	AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##NM_001251991|GMNN|51053|geminin, DNA replication inhibitor##AK299047|FAM65B|9750|family with sequence similarity 65, member B##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A	0.61751	CTCF.p2:-28:0.618
chr6	38997355	38997471	reg1028724.p1	5.268	+	AF527621 NM_001206927	-314297	+	TSC_hg19_v1_chr6_-_38670922 NM_006708	-326476	-	AK312662 TSC_hg19_v1_chr6_-_38670921	-326493	-	BC112126 BC113493 NM_002062 TSC_hg19_v1_chr6_+_39016556 U01104 L23503 AB463688 U01156 U01157	19173	+	AF086405 TSC_hg19_v1_chr6_-_39072506	75046	-	TSC_hg19_v1_chr6_-_39082938 CR627244 AK001963 NM_018322 EU832483 EU832563 BC022007	85433	-	AF527621|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_001206927|DNAH8|1769|dynein, axonemal, heavy chain 8##NM_006708|GLO1|2739|glyoxalase I##AK312662|GLO1|2739|glyoxalase I##BC112126|GLP1R|2740|glucagon-like peptide 1 receptor##BC113493|GLP1R|2740|glucagon-like peptide 1 receptor##NM_002062|GLP1R|2740|glucagon-like peptide 1 receptor##U01104|GLP1R|2740|glucagon-like peptide 1 receptor##L23503|GLP1R|2740|glucagon-like peptide 1 receptor##U01156|GLP1R|2740|glucagon-like peptide 1 receptor##U01157|GLP1R|2740|glucagon-like peptide 1 receptor##AF086405|C6orf64|55776|chromosome 6 open reading frame 64##CR627244|C6orf64|55776|chromosome 6 open reading frame 64##AK001963|C6orf64|55776|chromosome 6 open reading frame 64##NM_018322|C6orf64|55776|chromosome 6 open reading frame 64##EU832483|C6orf64|55776|chromosome 6 open reading frame 64##EU832563|C6orf64|55776|chromosome 6 open reading frame 64##BC022007|C6orf64|55776|chromosome 6 open reading frame 64	0.0	
chr7	80021720	80021823	reg1023933.p2	5.268	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	-257632	+	TSC_hg19_v1_chr7_+_79083303 AK311103	-938614	+	AB014605 BC150277 AK297353 AF038563 NM_012301	-938892	-	NM_001102386 BC147016 BC147017	119511	-	NM_001001547 AK129899 AK300101 AK312920	209750	+	TSC_hg19_v1_chr7_+_80267800 NM_000072 NM_001001548	246035	+	NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_001102386|GNAT3|346562|guanine nucleotide binding protein, alpha transducing 3##BC147016|GNAT3|346562|guanine nucleotide binding protein, alpha transducing 3##BC147017|GNAT3|346562|guanine nucleotide binding protein, alpha transducing 3##NM_001001547|CD36|948|CD36 molecule (thrombospondin receptor)##AK129899|CD36|948|CD36 molecule (thrombospondin receptor)##AK300101|CD36|948|CD36 molecule (thrombospondin receptor)##AK312920|CD36|948|CD36 molecule (thrombospondin receptor)##NM_000072|CD36|948|CD36 molecule (thrombospondin receptor)##NM_001001548|CD36|948|CD36 molecule (thrombospondin receptor)	0.999214	CTCF.p2:-5:0.999
chr9	78097599	78097704	reg1023361.p1	5.268	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	-394141	+	TSC_hg19_v1_chr9_+_77703406 NM_012383	-394251	+	BC001366 TSC_hg19_v1_chr9_-_77703070 AK000566 AK097144 AK023413 BC036804 NM_001127603 NM_017881 BC026243	-394563	-	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	407984	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	911740	-	AY196293 NM_001097634	958930	+	AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1##NM_012383|OSTF1|26578|osteoclast stimulating factor 1##BC001366|C9orf95|54981|chromosome 9 open reading frame 95##AK000566|C9orf95|54981|chromosome 9 open reading frame 95##AK097144|C9orf95|54981|chromosome 9 open reading frame 95##AK023413|C9orf95|54981|chromosome 9 open reading frame 95##BC036804|C9orf95|54981|chromosome 9 open reading frame 95##NM_001127603|C9orf95|54981|chromosome 9 open reading frame 95##NM_017881|C9orf95|54981|chromosome 9 open reading frame 95##BC026243|C9orf95|54981|chromosome 9 open reading frame 95##NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.761093	CTCF.p2:43:0.761
chr10	62950468	62950580	reg1027877.p1	5.267	+	AK075129 BC093035 TSC_hg19_v1_chr10_-_62761269	-189284	-	BC041791 AB018283 BC032848 TSC_hg19_v1_chr10_-_62704033 NM_001242359 NM_014836 AK307630	-246572	-	TSC_hg19_v1_chr10_+_62538253 BC107750 AK291939	-412253	+	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	262435	-	CR749606 NM_178505	262683	-	BC041932 NM_173554	472194	+	AK075129|RHOBTB1|9886|Rho-related BTB domain containing 1##BC093035|RHOBTB1|9886|Rho-related BTB domain containing 1##BC041791|RHOBTB1|9886|Rho-related BTB domain containing 1##AB018283|RHOBTB1|9886|Rho-related BTB domain containing 1##BC032848|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_001242359|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_014836|RHOBTB1|9886|Rho-related BTB domain containing 1##AK307630|RHOBTB1|9886|Rho-related BTB domain containing 1##BC107750|CDK1|983|cyclin-dependent kinase 1##AK291939|CDK1|983|cyclin-dependent kinase 1##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26##CR749606|TMEM26|219623|transmembrane protein 26##NM_178505|TMEM26|219623|transmembrane protein 26##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107	0.999428	CTCF.p2:-5:0.999
chr15	40408092	40408273	reg1025768.p2	5.267	+	TSC_hg19_v1_chr15_-_40401076 BC060783 BC070043 NM_001003940	-7087	-	BC104983 BC104985 BC069328 BC069505 NM_033503 AK024472	-9572	-	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	-9896	-	NM_001211 AF053306 TSC_hg19_v1_chr15_+_40453249 AK296795 AK312709	45047	+	TSC_hg19_v1_chr15_+_40453269 AK296984 AF107297 BC018739 AF046918 AB208782 AF035933 AF068760 AF046079 AB384719 CU676304	45160	+	AK315817 NM_001128628 NM_001128629 AK315813 AK290227	101525	+	BC060783|BMF|90427|Bcl2 modifying factor##BC070043|BMF|90427|Bcl2 modifying factor##NM_001003940|BMF|90427|Bcl2 modifying factor##BC104983|BMF|90427|Bcl2 modifying factor##BC104985|BMF|90427|Bcl2 modifying factor##BC069328|BMF|90427|Bcl2 modifying factor##BC069505|BMF|90427|Bcl2 modifying factor##NM_033503|BMF|90427|Bcl2 modifying factor##AK024472|BMF|90427|Bcl2 modifying factor##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor##NM_001211|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF053306|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AK296795|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AK312709|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AK296984|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF107297|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##BC018739|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF046918|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AB208782|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF035933|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF068760|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AF046079|BUB1B|701|budding uninhibited by benzimidazoles 1 homolog beta (yeast)##AK315817|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##NM_001128628|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##NM_001128629|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AK315813|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AK290227|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6	0.0	
chr15	70271818	70271948	reg1010475.p2	5.267	+	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-526662	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-564521	-	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	-565137	+	BC015421 TSC_hg19_v1_chr15_-_70341948	70026	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	118344	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	118360	-	NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.0	
chr19	10350010	10350166	reg1022772.p1	5.267	+	NM_004230 TSC_hg19_v1_chr19_-_10342058	-8082	-	TSC_hg19_v1_chr19_-_10305646 BC126227 BC144093 NM_001130823 NM_001379 AF180682 X63692	-44361	-	TSC_hg19_v1_chr19_-_10305600 BC092517	-44483	-	TSC_hg19_v1_chr19_+_10362680 NM_015956 NM_146387 NM_146388 AF132962 BC000756	12559	+	TSC_hg19_v1_chr19_+_10362889 BC009858	12810	+	TSC_hg19_v1_chr19_+_10362916 AB049635 AY007152	12904	+	NM_004230|S1PR2|9294|sphingosine-1-phosphate receptor 2##BC126227|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC144093|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001130823|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001379|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##AF180682|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##X63692|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC092517|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_015956|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146387|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146388|MRPL4|51073|mitochondrial ribosomal protein L4##AF132962|MRPL4|51073|mitochondrial ribosomal protein L4##BC000756|MRPL4|51073|mitochondrial ribosomal protein L4##BC009858|MRPL4|51073|mitochondrial ribosomal protein L4##AB049635|MRPL4|51073|mitochondrial ribosomal protein L4##AY007152|MRPL4|51073|mitochondrial ribosomal protein L4	0.0	
chr6	149461304	149461423	reg1029109.p1	5.267	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-393154	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-797172	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-797373	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	177740	+	AK315038 NM_015093 AK307650	178078	+	AY340238 NM_001002255 BC130305 HQ258040	260145	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chrX	22099726	22099867	reg1030848.p1	5.267	+	NM_000444 U87284 AD000712 AK298030 BC105057 BC105059 U75645 U60475	-48771	+	NM_004595 TSC_hg19_v1_chrX_+_21958824 AD001528 AK293455 AK313834 BC009898 BC085621 EU176347	-140970	+	AK091850 NM_206923	-225692	+	GQ355336 NM_152577 AK098601 BC074910 BC126190 BC126192 HQ258412 HQ258552	191272	+	AY039237 NM_182699 BC067878 BC051703	918288	+	AK298796 NM_173495 AK054858 BC121061	1253264	+	NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##NM_004595|SMS|6611|spermine synthase##AD001528|SMS|6611|spermine synthase##AK293455|SMS|6611|spermine synthase##AK313834|SMS|6611|spermine synthase##BC009898|SMS|6611|spermine synthase##BC085621|SMS|6611|spermine synthase##EU176347|SMS|6611|spermine synthase##AK091850|YY2|404281|YY2 transcription factor##NM_206923|YY2|404281|YY2 transcription factor##GQ355336|ZNF645|158506|zinc finger protein 645##NM_152577|ZNF645|158506|zinc finger protein 645##AK098601|ZNF645|158506|zinc finger protein 645##BC074910|ZNF645|158506|zinc finger protein 645##BC126190|ZNF645|158506|zinc finger protein 645##BC126192|ZNF645|158506|zinc finger protein 645##HQ258412|ZNF645|158506|zinc finger protein 645##HQ258552|ZNF645|158506|zinc finger protein 645##AY039237|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##NM_182699|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC067878|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC051703|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##AK298796|PTCHD1|139411|patched domain containing 1##NM_173495|PTCHD1|139411|patched domain containing 1##AK054858|PTCHD1|139411|patched domain containing 1##BC121061|PTCHD1|139411|patched domain containing 1	0.99477	CTCF.p2:-1:0.995
chr1	48526987	48527088	reg1027843.p1	5.266	+	NM_001194986	-64476	-	AF042832 NM_004474	-625349	+	AF275722 NM_012186	-645294	+	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	161355	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	410641	-	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	410808	-	NM_001194986|LOC388630|388630|UPF0632 protein A##AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6	0.905177	CTCF.p2:5:0.905
chr14	97033775	97033920	reg1026076.p1	5.266	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-65063	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-65101	+	TSC_hg19_v1_chr14_+_96968718 NM_001252006 NM_001252007 NM_032632 AK302406 BC036014	-65138	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	229868	+	AK098639 NM_182560	2144102	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	2703770	-	BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##NM_001252006|PAPOLA|10914|poly(A) polymerase alpha##NM_001252007|PAPOLA|10914|poly(A) polymerase alpha##NM_032632|PAPOLA|10914|poly(A) polymerase alpha##AK302406|PAPOLA|10914|poly(A) polymerase alpha##BC036014|PAPOLA|10914|poly(A) polymerase alpha##NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.974695	CTCF.p2:-34:0.975
chr17	16776654	16776792	reg1024700.p1	5.266	+	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-183119	+	AK131401 NM_020787	-219562	-	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-304227	-	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	98681	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	169241	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	332890	-	EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6	0.998785	CTCF.p2:-8:0.999
chr17	80372674	80372789	reg1006157.p2	5.266	+	BC136490 NM_018949 TSC_hg19_v1_chr17_+_80332304	-40501	+	BC036191 NM_207459 AK093086 AX747912 BC057820 BC050391	-55598	+	TSC_hg19_v1_chr17_-_80291903 NM_003004	-80820	-	TSC_hg19_v1_chr17_+_80376228 NM_173620	3511	+	BC008897 TSC_hg19_v1_chr17_-_80376463 BC023602 AK025875 AK311057 NM_024648 NM_175902	3745	-	TSC_hg19_v1_chr17_+_80376563 BC035561	3863	+	BC136490|UTS2R|2837|urotensin 2 receptor##NM_018949|UTS2R|2837|urotensin 2 receptor##BC036191|TEX19|400629|testis expressed 19##NM_207459|TEX19|400629|testis expressed 19##AK093086|TEX19|400629|testis expressed 19##BC057820|TEX19|400629|testis expressed 19##BC050391|TEX19|400629|testis expressed 19##NM_003004|SECTM1|6398|secreted and transmembrane 1##NM_173620|HEXDC|284004|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing##BC008897|C17orf101|79701|chromosome 17 open reading frame 101##BC023602|C17orf101|79701|chromosome 17 open reading frame 101##AK025875|C17orf101|79701|chromosome 17 open reading frame 101##AK311057|C17orf101|79701|chromosome 17 open reading frame 101##NM_024648|C17orf101|79701|chromosome 17 open reading frame 101##NM_175902|C17orf101|79701|chromosome 17 open reading frame 101##BC035561|HEXDC|284004|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing	0.0	
chr9	44292411	44292506	reg1025467.p1	5.266	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-607615	+	NM_001145196	-661729	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-1158971	-	TSC_hg19_v1_chr9_+_45441926 BC006438	1149468	+	BC040528 NM_001113541 NM_015667	21217151	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	22164843	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.997456	CTCF.p2:15:0.997
chr10	135071143	135071244	reg1023388.p1	5.265	+	AF068006 BC108915 BC108916 NM_014468 AB464343 EU446701	-19782	+	AB011076 AY606112 NM_003577	-27417	+	TSC_hg19_v1_chr10_+_134973945 NM_152643 AK090457	-97222	+	BC115404 D26579 BC064500 AX810718 AK310662 TSC_hg19_v1_chr10_-_135090368 AK301147 AK312834 NM_001109 NM_001164489 NM_001164490	19172	-	BC005011 BC093770 BC111957 BC143247 AF042379 TSC_hg19_v1_chr10_-_135122377 BC052368 AK299564 AK297251 AK314520	51166	-	TSC_hg19_v1_chr10_+_135122444 BC015139 BC019897 NM_145806 AK091711 AX747142 AK292380	51216	+	AF068006|VENTX|27287|VENT homeobox##BC108915|VENTX|27287|VENT homeobox##BC108916|VENTX|27287|VENT homeobox##NM_014468|VENTX|27287|VENT homeobox##EU446701|VENTX|27287|VENT homeobox##AB011076|UTF1|8433|undifferentiated embryonic cell transcription factor 1##AY606112|UTF1|8433|undifferentiated embryonic cell transcription factor 1##NM_003577|UTF1|8433|undifferentiated embryonic cell transcription factor 1##NM_152643|KNDC1|85442|kinase non-catalytic C-lobe domain (KIND) containing 1##AK090457|KNDC1|85442|kinase non-catalytic C-lobe domain (KIND) containing 1##BC115404|ADAM8|101|ADAM metallopeptidase domain 8##D26579|ADAM8|101|ADAM metallopeptidase domain 8##BC064500|ADAM8|101|ADAM metallopeptidase domain 8##AK310662|ADAM8|101|ADAM metallopeptidase domain 8##AK301147|ADAM8|101|ADAM metallopeptidase domain 8##AK312834|ADAM8|101|ADAM metallopeptidase domain 8##NM_001109|ADAM8|101|ADAM metallopeptidase domain 8##NM_001164489|ADAM8|101|ADAM metallopeptidase domain 8##NM_001164490|ADAM8|101|ADAM metallopeptidase domain 8##BC005011|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC093770|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC111957|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC143247|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AF042379|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC052368|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AK299564|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AK297251|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AK314520|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC015139|ZNF511|118472|zinc finger protein 511##BC019897|ZNF511|118472|zinc finger protein 511##NM_145806|ZNF511|118472|zinc finger protein 511##AK091711|ZNF511|118472|zinc finger protein 511##AK292380|ZNF511|118472|zinc finger protein 511	1.003546	CTCF.p2:0:0.528	CTCF.p2:72:0.475
chr1	3236644	3236770	reg1028063.p1	5.265	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	-250931	+	NM_080431 AK058153 AK314500 BC029499	-298652	+	NM_001242672	-530478	-	TSC_hg19_v1_chr1_+_3371228 NM_014448 AK095984	134498	+	AK310408 TSC_hg19_v1_chr1_+_3388187 AK296150	151477	+	TSC_hg19_v1_chr1_-_3447976 AB011539	211285	-	NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16##NM_080431|ACTRT2|140625|actin-related protein T2##AK058153|ACTRT2|140625|actin-related protein T2##AK314500|ACTRT2|140625|actin-related protein T2##BC029499|ACTRT2|140625|actin-related protein T2##NM_001242672|TTC34|100287898|tetratricopeptide repeat domain 34##NM_014448|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK095984|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK310408|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK296150|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AB011539|MEGF6|1953|multiple EGF-like-domains 6	0.794569	CTCF.p2:-7:0.795
chr1	53326384	53326541	reg1027991.p1	5.265	+	AY271826 NM_001004339	-18280	+	TSC_hg19_v1_chr1_-_53238345 D28429	-88119	-	TSC_hg19_v1_chr1_+_53192124 AK296460 NM_024646 AB051517	-134344	+	TSC_hg19_v1_chr1_-_53387217 AK300896 AK299834	60765	-	TSC_hg19_v1_chr1_-_53387399 CU692200 BC038389 BC044574 AK315906 AK310650 AK001810	60907	-	TSC_hg19_v1_chr1_-_53387413 BC051887 BC040480 NM_001198961 NM_001198962 NM_018281 AK309535	61031	-	AY271826|ZYG11A|440590|zyg-11 homolog A (C. elegans)##NM_001004339|ZYG11A|440590|zyg-11 homolog A (C. elegans)##AK296460|ZYG11B|79699|zyg-11 homolog B (C. elegans)##NM_024646|ZYG11B|79699|zyg-11 homolog B (C. elegans)##AB051517|ZYG11B|79699|zyg-11 homolog B (C. elegans)##AK300896|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK299834|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC038389|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC044574|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK315906|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK310650|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK001810|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC051887|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC040480|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_001198961|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_001198962|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_018281|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK309535|ECHDC2|55268|enoyl CoA hydratase domain containing 2	0.0	
chr2	180205600	180205720	reg1025883.p1	5.264	+	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	-76255	-	AL832777 NM_173648	-290875	-	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-533557	-	AK057999 NM_001113398	221654	-	AK096822 NM_001113397	405108	-	TSC_hg19_v1_chr2_-_180726048 AK131432 BC033042	520387	-	AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B##AK096822|ZNF385B|151126|zinc finger protein 385B##NM_001113397|ZNF385B|151126|zinc finger protein 385B##AK131432|ZNF385B|151126|zinc finger protein 385B##BC033042|ZNF385B|151126|zinc finger protein 385B	0.719971	CTCF.p2:-9:0.720
chr7	104558963	104559144	reg1006927.p1	5.264	+	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-589835	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-710622	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-929057	-	TSC_hg19_v1_chr7_-_104567089 BC050337	8037	-	TSC_hg19_v1_chr7_-_104653491 AK124046	94429	-	TSC_hg19_v1_chr7_-_104654062 AK094372	95021	-	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##BC050337|LOC723809|723809|uncharacterized LOC723809##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545	0.0	
chrX	123018792	123018910	reg1027479.p1	5.264	+	TSC_hg19_v1_chrX_+_122993844 AK313883 NM_001204401 NM_001167 AK309704 U32974 BC032729	-24909	+	TSC_hg19_v1_chrX_-_122866897 NM_001081550	-151954	-	TSC_hg19_v1_chrX_-_122866885 AK001758	-151968	-	TSC_hg19_v1_chrX_+_123094397 NM_001042749 AK098737 BX640970 AK298633 AK313559	75673	+	NM_001042750 NM_001042751 NM_006603 TSC_hg19_v1_chrX_+_123095573 AL831939 BX641002 CR749433 BX641003	76722	+	TSC_hg19_v1_chrX_+_123095638 BC001765	76786	+	AK313883|XIAP|331|X-linked inhibitor of apoptosis##NM_001204401|XIAP|331|X-linked inhibitor of apoptosis##NM_001167|XIAP|331|X-linked inhibitor of apoptosis##AK309704|XIAP|331|X-linked inhibitor of apoptosis##U32974|XIAP|331|X-linked inhibitor of apoptosis##BC032729|XIAP|331|X-linked inhibitor of apoptosis##NM_001081550|THOC2|57187|THO complex 2##AK001758|THOC2|57187|THO complex 2##NM_001042749|STAG2|10735|stromal antigen 2##AK098737|STAG2|10735|stromal antigen 2##BX640970|STAG2|10735|stromal antigen 2##AK298633|STAG2|10735|stromal antigen 2##AK313559|STAG2|10735|stromal antigen 2##NM_001042750|STAG2|10735|stromal antigen 2##NM_001042751|STAG2|10735|stromal antigen 2##NM_006603|STAG2|10735|stromal antigen 2##AL831939|STAG2|10735|stromal antigen 2##BX641002|STAG2|10735|stromal antigen 2##CR749433|STAG2|10735|stromal antigen 2##BX641003|STAG2|10735|stromal antigen 2##BC001765|STAG2|10735|stromal antigen 2	0.950222	CTCF.p2:9:0.930
chrX	3858163	3858293	reg1029761.p1	5.264	+	TSC_hg19_v1_chrX_-_3631668 NM_005044	-226510	-	TSC_hg19_v1_chrX_-_3631645 X85545	-226583	-	TSC_hg19_v1_chrX_-_3631619 BC041073	-226686	-	AB033086 AF376803 AX773938 NM_020742	2287659	-	AK055471 BC034018 NM_181332	2288452	-	AF167078 AF167079 NM_016379	2594930	-	NM_005044|PRKX|5613|protein kinase, X-linked##X85545|PRKX|5613|protein kinase, X-linked##BC041073|PRKX|5613|protein kinase, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A	0.991444	CTCF.p2:-17:0.991
chr22	43088528	43088709	reg1025390.p2	5.263	+	TSC_hg19_v1_chr22_-_43045399 NM_000398	-43215	-	TSC_hg19_v1_chr22_-_43045347 AJ010116 AJ010117 AJ010118 BT009821 AB463000 CU012995 CU013283 CR456435 AF361370 Y09501 BC004821	-43286	-	TSC_hg19_v1_chr22_-_43042979 NM_001129819 NM_001171661 NM_007326	-45633	-	AK074388 TSC_hg19_v1_chr22_-_43089917 AJ245581 CU677819 AB590407 DQ891619 DQ894811	1289	-	TSC_hg19_v1_chr22_-_43116877 BC017068 GU902275 GU902276 GU902277 GU902278 GU902279 GU902280 GU902281 AK130208 NM_017436	28237	-	TSC_hg19_v1_chr22_-_43117270 AK312927	28659	-	NM_000398|CYB5R3|1727|cytochrome b5 reductase 3##AJ010116|CYB5R3|1727|cytochrome b5 reductase 3##AJ010117|CYB5R3|1727|cytochrome b5 reductase 3##AJ010118|CYB5R3|1727|cytochrome b5 reductase 3##BT009821|CYB5R3|1727|cytochrome b5 reductase 3##CU012995|CYB5R3|1727|cytochrome b5 reductase 3##CU013283|CYB5R3|1727|cytochrome b5 reductase 3##CR456435|CYB5R3|1727|cytochrome b5 reductase 3##AF361370|CYB5R3|1727|cytochrome b5 reductase 3##Y09501|CYB5R3|1727|cytochrome b5 reductase 3##BC004821|CYB5R3|1727|cytochrome b5 reductase 3##NM_001129819|CYB5R3|1727|cytochrome b5 reductase 3##NM_001171661|CYB5R3|1727|cytochrome b5 reductase 3##NM_007326|CYB5R3|1727|cytochrome b5 reductase 3##AK074388|A4GALT|53947|alpha 1,4-galactosyltransferase##AJ245581|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ891619|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ894811|A4GALT|53947|alpha 1,4-galactosyltransferase##BC017068|A4GALT|53947|alpha 1,4-galactosyltransferase##NM_017436|A4GALT|53947|alpha 1,4-galactosyltransferase##AK312927|A4GALT|53947|alpha 1,4-galactosyltransferase	1.365632	CTCF.p2:-13:0.368	CTCF.p2:55:0.983
chr3	101412574	101412663	reg1027126.p1	5.263	+	CR456729 TSC_hg19_v1_chr3_-_101405541 BC070193 BC000690 M94314 AK311992 NM_000986	-7136	-	TSC_hg19_v1_chr3_-_101395977 BC111700 U69274 BC028062 AK312859 NM_014415	-16798	-	TSC_hg19_v1_chr3_+_101395318 BC016930	-17307	+	AK309806 AL833269 BC041085 NM_024548 AK294784	30849	+	NM_145037 TSC_hg19_v1_chr3_+_101498054	85430	+	TSC_hg19_v1_chr3_+_101498080 BC009431	85470	+	CR456729|RPL24|6152|ribosomal protein L24##BC070193|RPL24|6152|ribosomal protein L24##BC000690|RPL24|6152|ribosomal protein L24##M94314|RPL24|6152|ribosomal protein L24##AK311992|RPL24|6152|ribosomal protein L24##NM_000986|RPL24|6152|ribosomal protein L24##BC111700|ZBTB11|27107|zinc finger and BTB domain containing 11##U69274|ZBTB11|27107|zinc finger and BTB domain containing 11##BC028062|ZBTB11|27107|zinc finger and BTB domain containing 11##AK312859|ZBTB11|27107|zinc finger and BTB domain containing 11##NM_014415|ZBTB11|27107|zinc finger and BTB domain containing 11##BC016930|LOC100009676|100009676|uncharacterized LOC100009676##AK309806|CEP97|79598|centrosomal protein 97kDa##AL833269|CEP97|79598|centrosomal protein 97kDa##BC041085|CEP97|79598|centrosomal protein 97kDa##NM_024548|CEP97|79598|centrosomal protein 97kDa##AK294784|CEP97|79598|centrosomal protein 97kDa##NM_145037|FAM55C|91775|family with sequence similarity 55, member C##BC009431|FAM55C|91775|family with sequence similarity 55, member C	0.0	
chr7	96225605	96225694	reg1028226.p2	5.263	+	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	-92822	-	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	-274247	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	-823741	+	CR456887 TSC_hg19_v1_chr7_-_96339159 AK309241 BC032782	113469	-	TSC_hg19_v1_chr7_-_96339174 AK291070 NM_006304 U41515	113537	-	TSC_hg19_v1_chr7_-_96633611 AK091367 AX746939 BC101445 BC101446 BC101447 BC101985 BC113049	407962	-	BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##CR456887|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##AK309241|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##BC032782|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##AK291070|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##NM_006304|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##U41515|SHFM1|7979|split hand/foot malformation (ectrodactyly) type 1##AK091367|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101445|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101446|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101447|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101985|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC113049|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)	0.07213	
chr10	135060594	135060729	reg1025351.p1	5.262	+	AF068006 BC108915 BC108916 NM_014468 AB464343 EU446701	-9250	+	AB011076 AY606112 NM_003577	-16885	+	TSC_hg19_v1_chr10_+_134973945 NM_152643 AK090457	-86690	+	BC115404 D26579 BC064500 AX810718 AK310662 TSC_hg19_v1_chr10_-_135090368 AK301147 AK312834 NM_001109 NM_001164489 NM_001164490	29704	-	BC005011 BC093770 BC111957 BC143247 AF042379 TSC_hg19_v1_chr10_-_135122377 BC052368 AK299564 AK297251 AK314520	61698	-	TSC_hg19_v1_chr10_+_135122444 BC015139 BC019897 NM_145806 AK091711 AX747142 AK292380	61748	+	AF068006|VENTX|27287|VENT homeobox##BC108915|VENTX|27287|VENT homeobox##BC108916|VENTX|27287|VENT homeobox##NM_014468|VENTX|27287|VENT homeobox##EU446701|VENTX|27287|VENT homeobox##AB011076|UTF1|8433|undifferentiated embryonic cell transcription factor 1##AY606112|UTF1|8433|undifferentiated embryonic cell transcription factor 1##NM_003577|UTF1|8433|undifferentiated embryonic cell transcription factor 1##NM_152643|KNDC1|85442|kinase non-catalytic C-lobe domain (KIND) containing 1##AK090457|KNDC1|85442|kinase non-catalytic C-lobe domain (KIND) containing 1##BC115404|ADAM8|101|ADAM metallopeptidase domain 8##D26579|ADAM8|101|ADAM metallopeptidase domain 8##BC064500|ADAM8|101|ADAM metallopeptidase domain 8##AK310662|ADAM8|101|ADAM metallopeptidase domain 8##AK301147|ADAM8|101|ADAM metallopeptidase domain 8##AK312834|ADAM8|101|ADAM metallopeptidase domain 8##NM_001109|ADAM8|101|ADAM metallopeptidase domain 8##NM_001164489|ADAM8|101|ADAM metallopeptidase domain 8##NM_001164490|ADAM8|101|ADAM metallopeptidase domain 8##BC005011|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC093770|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC111957|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC143247|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AF042379|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC052368|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AK299564|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AK297251|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AK314520|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC015139|ZNF511|118472|zinc finger protein 511##BC019897|ZNF511|118472|zinc finger protein 511##NM_145806|ZNF511|118472|zinc finger protein 511##AK091711|ZNF511|118472|zinc finger protein 511##AK292380|ZNF511|118472|zinc finger protein 511	0.238722	
chr1	156554708	156554875	reg1004646.p2	5.262	+	NM_001105669	-5273	+	AY253300 TSC_hg19_v1_chr1_-_156542352 AB105103 BC131536 BC033549 NM_178229	-12429	-	AK310187 TSC_hg19_v1_chr1_-_156470568	-84223	-	TSC_hg19_v1_chr1_+_156561567 AK294835 AK298222 BC056917 NM_144772 AJ315849 BC100931 BC100932 BC100933 BC100934	6764	+	TSC_hg19_v1_chr1_+_156561594 AK316083	6811	+	AB528795 BC032436 TSC_hg19_v1_chr1_-_156571275 BC040147 AK125763 BC056904 AK000256 AK293026 AK301232 NM_015590 NM_182679	16466	-	NM_001105669|TTC24|164118|tetratricopeptide repeat domain 24##AY253300|IQGAP3|128239|IQ motif containing GTPase activating protein 3##AB105103|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC131536|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC033549|IQGAP3|128239|IQ motif containing GTPase activating protein 3##NM_178229|IQGAP3|128239|IQ motif containing GTPase activating protein 3##AK310187|MEF2D|4209|myocyte enhancer factor 2D##AK294835|APOA1BP|128240|apolipoprotein A-I binding protein##AK298222|APOA1BP|128240|apolipoprotein A-I binding protein##BC056917|APOA1BP|128240|apolipoprotein A-I binding protein##NM_144772|APOA1BP|128240|apolipoprotein A-I binding protein##AJ315849|APOA1BP|128240|apolipoprotein A-I binding protein##BC100931|APOA1BP|128240|apolipoprotein A-I binding protein##BC100932|APOA1BP|128240|apolipoprotein A-I binding protein##BC100933|APOA1BP|128240|apolipoprotein A-I binding protein##BC100934|APOA1BP|128240|apolipoprotein A-I binding protein##BC032436|GPATCH4|54865|G patch domain containing 4##BC040147|GPATCH4|54865|G patch domain containing 4##AK125763|GPATCH4|54865|G patch domain containing 4##BC056904|GPATCH4|54865|G patch domain containing 4##AK000256|GPATCH4|54865|G patch domain containing 4##AK293026|GPATCH4|54865|G patch domain containing 4##AK301232|GPATCH4|54865|G patch domain containing 4##NM_015590|GPATCH4|54865|G patch domain containing 4##NM_182679|GPATCH4|54865|G patch domain containing 4	0.356177	CTCF.p2:15:0.356
chr18	21544628	21544745	reg1026709.p2	5.262	+	TSC_hg19_v1_chr18_+_21452983 NM_000227 NM_001127718 X85107 X84392 AY327114 L34155	-91675	+	TSC_hg19_v1_chr18_+_21269563 BC093406 NM_001127717 NM_198129 AY327115 AY327116	-275099	+	TSC_hg19_v1_chr18_+_21269416 AK096422	-275272	+	AK091080 AX746769 NM_153211 BC121034 BC121035	28108	+	TSC_hg19_v1_chr18_+_21594449 BC016833 NM_001135993 NM_001243425	49713	+	TSC_hg19_v1_chr18_+_21594754 AK074875	50070	+	NM_000227|LAMA3|3909|laminin, alpha 3##NM_001127718|LAMA3|3909|laminin, alpha 3##X85107|LAMA3|3909|laminin, alpha 3##X84392|LAMA3|3909|laminin, alpha 3##AY327114|LAMA3|3909|laminin, alpha 3##L34155|LAMA3|3909|laminin, alpha 3##BC093406|LAMA3|3909|laminin, alpha 3##NM_001127717|LAMA3|3909|laminin, alpha 3##NM_198129|LAMA3|3909|laminin, alpha 3##AY327115|LAMA3|3909|laminin, alpha 3##AY327116|LAMA3|3909|laminin, alpha 3##AK096422|LAMA3|3909|laminin, alpha 3##AK091080|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_153211|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121034|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121035|TTC39C|125488|tetratricopeptide repeat domain 39C##BC016833|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001135993|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001243425|TTC39C|125488|tetratricopeptide repeat domain 39C##AK074875|TTC39C|125488|tetratricopeptide repeat domain 39C	0.033059	
chr5	176239957	176240058	reg1027894.p1	5.262	+	TSC_hg19_v1_chr5_+_176237521 AK131380 NM_133369 BC157824	-2452	+	TSC_hg19_v1_chr5_+_176074497 AK024427 BC067105 BC010405 AF174603 CU679699 CU688248	-165455	+	NM_001006616 NM_012171 NM_130465 TSC_hg19_v1_chr5_+_176074470 AY037146	-165577	+	U51333 BC028129 NM_002115	86316	-	AK304794 BX537376 NM_016290 AK023044 BC032561 BC006078 BC014069 AF349313 NM_001199297 NM_001199298 TSC_hg19_v1_chr5_-_176433806	193581	-	AK297448 AK297584 NM_012279 TSC_hg19_v1_chr5_+_176449708 AK295549 AF083340 AK026627 AK300065 BC007775 AL359576 CR749692 AK131469 AK300738 AB463365 AM392799 AM393768	209712	+	AK131380|UNC5A|90249|unc-5 homolog A (C. elegans)##NM_133369|UNC5A|90249|unc-5 homolog A (C. elegans)##BC157824|UNC5A|90249|unc-5 homolog A (C. elegans)##AK024427|TSPAN17|26262|tetraspanin 17##BC067105|TSPAN17|26262|tetraspanin 17##BC010405|TSPAN17|26262|tetraspanin 17##AF174603|TSPAN17|26262|tetraspanin 17##NM_001006616|TSPAN17|26262|tetraspanin 17##NM_012171|TSPAN17|26262|tetraspanin 17##NM_130465|TSPAN17|26262|tetraspanin 17##AY037146|TSPAN17|26262|tetraspanin 17##U51333|HK3|3101|hexokinase 3 (white cell)##BC028129|HK3|3101|hexokinase 3 (white cell)##NM_002115|HK3|3101|hexokinase 3 (white cell)##AK304794|UIMC1|51720|ubiquitin interaction motif containing 1##BX537376|UIMC1|51720|ubiquitin interaction motif containing 1##NM_016290|UIMC1|51720|ubiquitin interaction motif containing 1##AK023044|UIMC1|51720|ubiquitin interaction motif containing 1##BC032561|UIMC1|51720|ubiquitin interaction motif containing 1##BC006078|UIMC1|51720|ubiquitin interaction motif containing 1##AF349313|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199297|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199298|UIMC1|51720|ubiquitin interaction motif containing 1##AK297448|ZNF346|23567|zinc finger protein 346##NM_012279|ZNF346|23567|zinc finger protein 346##AK295549|ZNF346|23567|zinc finger protein 346##AF083340|ZNF346|23567|zinc finger protein 346##AK026627|ZNF346|23567|zinc finger protein 346##AK300065|ZNF346|23567|zinc finger protein 346##BC007775|ZNF346|23567|zinc finger protein 346##AL359576|ZNF346|23567|zinc finger protein 346##CR749692|ZNF346|23567|zinc finger protein 346##AK131469|ZNF346|23567|zinc finger protein 346##AK300738|ZNF346|23567|zinc finger protein 346##AM392799|ZNF346|23567|zinc finger protein 346##AM393768|ZNF346|23567|zinc finger protein 346	0.95456	CTCF.p2:-3:0.955
chr6	149079781	149079911	reg1024656.p2	5.262	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-11637	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-415655	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-415856	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	559257	+	AK315038 NM_015093 AK307650	559595	+	AY340238 NM_001002255 BC130305 HQ258040	641662	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.055658	
chr6	57539484	57539624	reg1024834.p2	5.262	+	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	-357139	+	TSC_hg19_v1_chr6_-_57087081 AF161486 BC015021 NM_016277 CR749371 AK311123	-452483	-	AB034244 AK313796 NM_183227	-453324	-	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	748125	-	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	5456447	-	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	6490310	-	BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AF161486|RAB23|51715|RAB23, member RAS oncogene family##BC015021|RAB23|51715|RAB23, member RAS oncogene family##NM_016277|RAB23|51715|RAB23, member RAS oncogene family##CR749371|RAB23|51715|RAB23, member RAS oncogene family##AK311123|RAB23|51715|RAB23, member RAS oncogene family##AB034244|RAB23|51715|RAB23, member RAS oncogene family##AK313796|RAB23|51715|RAB23, member RAS oncogene family##NM_183227|RAB23|51715|RAB23, member RAS oncogene family##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain	0.457475	CTCF.p2:0:0.457
chr6_mcf_hap5	1947090	1947211	reg1030527.p1	5.262	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.147186	
chrX	107019057	107019194	reg1025559.p2	5.262	+	TSC_hg19_v1_chrX_-_107019012 NM_198057	-117	-	AK300535 TSC_hg19_v1_chrX_-_107018990 AK092669 AX747661	-186	-	AF153603 AF228339 AB025432 AF183393 BC072446 TSC_hg19_v1_chrX_-_106960293 AL110191 NM_004089 CR933650	-58844	-	TSC_hg19_v1_chrX_+_107069107 NM_012216 NM_052817	49978	+	Y18880 TSC_hg19_v1_chrX_+_107069473	50342	+	TSC_hg19_v1_chrX_+_107069526 AF196481	50447	+	NM_198057|TSC22D3|1831|TSC22 domain family, member 3##AK300535|TSC22D3|1831|TSC22 domain family, member 3##AK092669|TSC22D3|1831|TSC22 domain family, member 3##AF153603|TSC22D3|1831|TSC22 domain family, member 3##AF228339|TSC22D3|1831|TSC22 domain family, member 3##AB025432|TSC22D3|1831|TSC22 domain family, member 3##AF183393|TSC22D3|1831|TSC22 domain family, member 3##BC072446|TSC22D3|1831|TSC22 domain family, member 3##AL110191|TSC22D3|1831|TSC22 domain family, member 3##NM_004089|TSC22D3|1831|TSC22 domain family, member 3##CR933650|TSC22D3|1831|TSC22 domain family, member 3##NM_012216|MID2|11043|midline 2##NM_052817|MID2|11043|midline 2##Y18880|MID2|11043|midline 2##AF196481|MID2|11043|midline 2	0.0	
chrX	119330824	119330962	reg1025967.p1	5.262	+	AL590526 NM_001099685 NM_032498 AF317219 AL590524 AK058125 BC021719 AB464156 DQ890992 DQ894169	-38332	+	AB464155 EU446851 BC103857 BC103858 BC069324 BC069529 AY099086 NM_139282	-81083	-	AB464156 DQ890992 DQ894169 BC021719 AK058125 AL590524 AF317219 AL590526 NM_001099685 NM_032498	-119282	-	BC113730 BC113732 TSC_hg19_v1_chrX_-_119379092 BC022359 AK093895 AX748357	48185	-	TSC_hg19_v1_chrX_+_119384666 BC042753 NM_006777 NM_001184742 BX538016 AL833604 AK312321 BX538101	53693	+	TSC_hg19_v1_chrX_+_119384690 AX721150	53797	+	AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##EU446851|RHOXF1|158800|Rhox homeobox family, member 1##BC103857|RHOXF1|158800|Rhox homeobox family, member 1##BC103858|RHOXF1|158800|Rhox homeobox family, member 1##BC069324|RHOXF1|158800|Rhox homeobox family, member 1##BC069529|RHOXF1|158800|Rhox homeobox family, member 1##AY099086|RHOXF1|158800|Rhox homeobox family, member 1##NM_139282|RHOXF1|158800|Rhox homeobox family, member 1##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##BC113730|NKAPP1|158801|NFKB activating protein pseudogene 1##BC113732|NKAPP1|158801|NFKB activating protein pseudogene 1##BC022359|NKAPP1|158801|NFKB activating protein pseudogene 1##AK093895|NKAPP1|158801|NFKB activating protein pseudogene 1##BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33##NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33##NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33##BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33##AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33##AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33##BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33	0.98918	CTCF.p2:31:0.989
chr17	618032	618213	reg1027986.p1	5.261	+	CU675257 EU021218 EU434648 EU434649 EU434650 AF246287 AY444797 BC006116 TSC_hg19_v1_chr17_-_618080 BC040223 AF318335 AK290343 AK092532 AX747587 NM_001128159 NM_018289	-83	-	TSC_hg19_v1_chr17_+_260159 AK128660 NM_001013672 BC141806 BC057385 BC070116 CU687042	-357942	+	TSC_hg19_v1_chr17_-_202619 NM_001190411 NM_001190412 NM_001190413 NM_006987	-415498	-	TSC_hg19_v1_chr17_+_635806 AF477201 BC026023 AK025935 AK292065 NM_024792 CU693104 AK125146	17664	+	TSC_hg19_v1_chr17_-_655412 AB463052 AF173856 BC036024 AK302722 BC032084 BC020062	37298	-	TSC_hg19_v1_chr17_-_655502 NM_015721	37363	-	EU021218|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434648|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434649|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434650|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF246287|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AY444797|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC006116|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC040223|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF318335|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK290343|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK092532|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_001128159|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_018289|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK128660|C17orf97|400566|chromosome 17 open reading frame 97##NM_001013672|C17orf97|400566|chromosome 17 open reading frame 97##BC141806|C17orf97|400566|chromosome 17 open reading frame 97##BC057385|C17orf97|400566|chromosome 17 open reading frame 97##BC070116|C17orf97|400566|chromosome 17 open reading frame 97##NM_001190411|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190412|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190413|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_006987|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AF477201|FAM57A|79850|family with sequence similarity 57, member A##BC026023|FAM57A|79850|family with sequence similarity 57, member A##AK025935|FAM57A|79850|family with sequence similarity 57, member A##AK292065|FAM57A|79850|family with sequence similarity 57, member A##NM_024792|FAM57A|79850|family with sequence similarity 57, member A##AK125146|FAM57A|79850|family with sequence similarity 57, member A##AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4##AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4##NM_015721|GEMIN4|50628|gem (nuclear organelle) associated protein 4	0.0	
chr2	31657915	31658016	reg1027028.p2	5.260	+	TSC_hg19_v1_chr2_-_31637599 NM_000379	-20354	-	TSC_hg19_v1_chr2_-_31637569 U39487 D11456 U06117	-20394	-	AK294222 TSC_hg19_v1_chr2_+_31456985	-200982	+	EU832809 GQ129244 HQ258121 M74047 EF560740 AK316597 BC112252 BC113641 NM_000348	148038	-	TSC_hg19_v1_chr2_-_32235713 AF363446 BC018733 NM_001137602 NM_015955	577693	-	TSC_hg19_v1_chr2_-_32235732 AB041018	577763	-	NM_000379|XDH|7498|xanthine dehydrogenase##U39487|XDH|7498|xanthine dehydrogenase##D11456|XDH|7498|xanthine dehydrogenase##U06117|XDH|7498|xanthine dehydrogenase##AK294222|EHD3|30845|EH-domain containing 3##EU832809|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##GQ129244|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##HQ258121|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##M74047|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##EF560740|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##AK316597|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC112252|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC113641|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000348|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##AF363446|MEMO1|51072|mediator of cell motility 1##BC018733|MEMO1|51072|mediator of cell motility 1##NM_001137602|MEMO1|51072|mediator of cell motility 1##NM_015955|MEMO1|51072|mediator of cell motility 1##AB041018|MEMO1|51072|mediator of cell motility 1	0.154831	
chr2	87127944	87128048	reg1027375.p1	5.260	+	X13452 AK303360 M36712 Y00805 BC100911 BC100912 BC100913 BC100914 X13444 X13445 X13446 NM_001178100 NM_004931 NM_172101 NM_172102 NM_172213	-38977	-	AK124156 NM_001145873	-92478	-	AK300089 NM_001768 NM_171827	-109177	-	TSC_hg19_v1_chr2_+_87140905 AK302429 NM_001078170	12923	+	CR749330 NM_001024457	16741	+	BC107767 BC109248 BC070296 BC005379 NM_001032392 M93143 NM_002665 BC022294	120962	-	X13452|CD8B|926|CD8b molecule##AK303360|CD8B|926|CD8b molecule##M36712|CD8B|926|CD8b molecule##Y00805|CD8B|926|CD8b molecule##BC100911|CD8B|926|CD8b molecule##BC100912|CD8B|926|CD8b molecule##BC100913|CD8B|926|CD8b molecule##BC100914|CD8B|926|CD8b molecule##X13444|CD8B|926|CD8b molecule##X13445|CD8B|926|CD8b molecule##X13446|CD8B|926|CD8b molecule##NM_001178100|CD8B|926|CD8b molecule##NM_004931|CD8B|926|CD8b molecule##NM_172101|CD8B|926|CD8b molecule##NM_172102|CD8B|926|CD8b molecule##NM_172213|CD8B|926|CD8b molecule##AK124156|CD8A|925|CD8a molecule##NM_001145873|CD8A|925|CD8a molecule##AK300089|CD8A|925|CD8a molecule##NM_001768|CD8A|925|CD8a molecule##NM_171827|CD8A|925|CD8a molecule##AK302429|RGPD2|729857|RANBP2-like and GRIP domain containing 2##NM_001078170|RGPD2|729857|RANBP2-like and GRIP domain containing 2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##BC107767|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC022294|PLGLB2|5342|plasminogen-like B2	0.174419	
chr7	3340578	3340684	reg1023989.p2	5.260	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	-257169	-	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-456823	-	AK289723 AB075830 BC146753 NM_133463	-621473	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	368	+	TSC_hg19_v1_chr7_+_4721925 NM_001037165	1381207	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	1381620	+	AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##NM_001037165|FOXK1|221937|forkhead box K1##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1	0.036609	
chr10	56745646	56745739	reg1025618.p1	5.259	+	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	-184694	-	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-2214266	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-2671577	+	NM_001190478 TSC_hg19_v1_chr10_+_57358800	613082	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	1375322	-	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	1375334	-	AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor	0.943271	CTCF.p2:-4:0.943
chr11	1616816	1616908	reg1024092.p1	5.259	+	AB528866 AB126070 NM_001005922	-10366	-	NM_004420 U27193 TSC_hg19_v1_chr11_-_1593332	-23621	-	AB066564 NM_001172223 AK296658	-108970	-	AB528163 BC132882 BC132908 AJ628245 NM_001004325 AB126071	2644	-	AY597812 AB528164 AB126072 NM_001012708	12791	-	AB528165 AB126073 NM_001012709	26483	-	AB126070|KRTAP5-1|387264|keratin associated protein 5-1##NM_001005922|KRTAP5-1|387264|keratin associated protein 5-1##NM_004420|DUSP8|1850|dual specificity phosphatase 8##U27193|DUSP8|1850|dual specificity phosphatase 8##AB066564|MOB2|81532|MOB kinase activator 2##NM_001172223|MOB2|81532|MOB kinase activator 2##AK296658|MOB2|81532|MOB kinase activator 2##BC132882|KRTAP5-2|440021|keratin associated protein 5-2##BC132908|KRTAP5-2|440021|keratin associated protein 5-2##AJ628245|KRTAP5-2|440021|keratin associated protein 5-2##NM_001004325|KRTAP5-2|440021|keratin associated protein 5-2##AB126071|KRTAP5-2|440021|keratin associated protein 5-2##AY597812|KRTAP5-3|387266|keratin associated protein 5-3##AB126072|KRTAP5-3|387266|keratin associated protein 5-3##NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3##AB126073|KRTAP5-4|387267|keratin associated protein 5-4##NM_001012709|KRTAP5-4|387267|keratin associated protein 5-4	0.967405	CTCF.p2:9:0.967
chr15	23443120	23443231	reg1030808.p1	5.259	+	TSC_hg19_v1_chr15_-_23378229 AF041081 AF041080	-64931	-	TSC_hg19_v1_chr15_-_23378205 AK308640	-64985	-	DQ309040 BC048987 TSC_hg19_v1_chr15_-_23208467	-234764	-	NM_005664	367278	+	AK309383 TSC_hg19_v1_chr15_+_23810820 BC044639 BC013970 BC070293 EU446987 CU692226	367693	+	NM_019066 TSC_hg19_v1_chr15_-_23893004	449829	-	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041080|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AK308640|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##DQ309040|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC048987|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##NM_005664|MKRN3|7681|makorin ring finger protein 3##BC044639|MKRN3|7681|makorin ring finger protein 3##BC070293|MKRN3|7681|makorin ring finger protein 3##EU446987|MKRN3|7681|makorin ring finger protein 3##NM_019066|MAGEL2|54551|MAGE-like 2	0.864445	CTCF.p2:-4:0.836
chr17_ctg5_hap1	1576190	1576315	reg1029901.p1	5.259	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999163	CTCF.p2:-12:0.999
chr3	146358756	146358873	reg1028104.p1	5.259	+	AY436642 NM_001085420	-34812	-	BC157886 BC171917 TSC_hg19_v1_chr3_-_146323105	-35747	-	TSC_hg19_v1_chr3_-_146262505 AF098642 AB006746 NM_021105	-96290	-	BC041954 TSC_hg19_v1_chr3_+_147111244	752418	+	AK294831 NM_001168378	763256	-	AK293981 NM_001168379	764492	-	AY436642|PLSCR5|389158|phospholipid scramblase family, member 5##NM_001085420|PLSCR5|389158|phospholipid scramblase family, member 5##BC157886|PLSCR5|389158|phospholipid scramblase family, member 5##BC171917|PLSCR5|389158|phospholipid scramblase family, member 5##AF098642|PLSCR1|5359|phospholipid scramblase 1##AB006746|PLSCR1|5359|phospholipid scramblase 1##NM_021105|PLSCR1|5359|phospholipid scramblase 1##AK294831|ZIC4|84107|Zic family member 4##NM_001168378|ZIC4|84107|Zic family member 4##AK293981|ZIC4|84107|Zic family member 4##NM_001168379|ZIC4|84107|Zic family member 4	0.809598	CTCF.p2:3:0.810
chr3	36833964	36834080	reg1028406.p1	5.259	+	NM_033403	-52671	-	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	-411970	+	BC017805 NM_198399 BC066651 BC036548	-1111563	+	TSC_hg19_v1_chr3_-_36986546 NM_014831	152548	-	AB385383 CU687938 TSC_hg19_v1_chr3_-_37034574	200549	-	TSC_hg19_v1_chr3_-_37034623 BC064696 AF059751 BC012624 AB018309 AY178832 NM_014805	200679	-	NM_033403|DCLK3|85443|doublecortin-like kinase 3##AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain##BC017805|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_198399|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC066651|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC036548|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1##BC064696|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AF059751|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##BC012624|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AB018309|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AY178832|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##NM_014805|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1	0.0	
chr5	77974241	77974362	reg1027684.p1	5.259	+	TSC_hg19_v1_chr5_-_77944584 NM_005779	-29735	-	CR936660 TSC_hg19_v1_chr5_-_77845052	-129278	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-168105	-	J05225 TSC_hg19_v1_chr5_-_78281101	306787	-	AK290865 TSC_hg19_v1_chr5_-_78281134	306832	-	TSC_hg19_v1_chr5_-_78281142 AK314903	306845	-	NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B##AK314903|ARSB|411|arylsulfatase B	0.0	
chr9	5575110	5575259	reg1027848.p2	5.259	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	-64521	+	TSC_hg19_v1_chr9_+_5450455 NM_014143 DQ836393 AK300470 AK314567 AF233516 BC069381	-124677	+	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	-137304	-	TSC_hg19_v1_chr9_+_5629121 NM_001135920 NM_001206557 NM_020829	53943	+	BC036853 TSC_hg19_v1_chr9_-_5630098	54906	-	AL834191 AB058718 TSC_hg19_v1_chr9_-_5833045 BC136771 BC136773 BC144404	257767	-	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_014143|CD274|29126|CD274 molecule##DQ836393|CD274|29126|CD274 molecule##AK300470|CD274|29126|CD274 molecule##AK314567|CD274|29126|CD274 molecule##AF233516|CD274|29126|CD274 molecule##BC069381|CD274|29126|CD274 molecule##BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46##NM_001135920|KIAA1432|57589|KIAA1432##NM_001206557|KIAA1432|57589|KIAA1432##NM_020829|KIAA1432|57589|KIAA1432##BC036853|C9orf46|55848|chromosome 9 open reading frame 46##AL834191|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AB058718|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136771|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136773|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC144404|ERMP1|79956|endoplasmic reticulum metallopeptidase 1	0.0	
chr3	125635470	125635576	reg1028024.p1	5.258	+	TSC_hg19_v1_chr3_+_125635451 BC032772 BC041080	-67	+	TSC_hg19_v1_chr3_-_125314371 NM_022776	-321150	-	TSC_hg19_v1_chr3_-_125239050 NM_003794	-396470	-	BC073816 NM_001015050 NM_001195223	20360	-	AF231410 NM_001012337 BC141849 AK302014	52531	+	AK093380 AX748089 NM_001008487	140090	-	BC032772|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC041080|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##NM_022776|OSBPL11|114885|oxysterol binding protein-like 11##NM_003794|SNX4|8723|sorting nexin 4##BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like##AF231410|ROPN1B|152015|rhophilin associated tail protein 1B##NM_001012337|ROPN1B|152015|rhophilin associated tail protein 1B##BC141849|ROPN1B|152015|rhophilin associated tail protein 1B##AK093380|SLC41A3|54946|solute carrier family 41, member 3##NM_001008487|SLC41A3|54946|solute carrier family 41, member 3	0.0	
chr15	60371505	60371638	reg1028681.p1	5.257	+	TSC_hg19_v1_chr15_+_60296509 AK314075	-75022	+	EF565104 TSC_hg19_v1_chr15_+_60296453	-75122	+	AK290944 NM_012182 TSC_hg19_v1_chr15_+_60296425	-75143	+	AB587463 BC068065 BC009564 BC021114 BC052567 BC001388 BC013843 D00017 TSC_hg19_v1_chr15_-_60690186 AK222542 BX640598 AK297923 BC015834 BC023990 BC066955 BC093056 D28364 NM_001002857 NM_001002858 NM_001136015 NM_004039 AK309956 BC016774	318590	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	399703	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	513108	-	AK314075|FOXB1|27023|forkhead box B1##AK290944|FOXB1|27023|forkhead box B1##NM_012182|FOXB1|27023|forkhead box B1##BC068065|ANXA2|302|annexin A2##BC009564|ANXA2|302|annexin A2##BC021114|ANXA2|302|annexin A2##BC052567|ANXA2|302|annexin A2##BC001388|ANXA2|302|annexin A2##BC013843|ANXA2|302|annexin A2##D00017|ANXA2|302|annexin A2##AK222542|ANXA2|302|annexin A2##BX640598|ANXA2|302|annexin A2##AK297923|ANXA2|302|annexin A2##BC015834|ANXA2|302|annexin A2##BC023990|ANXA2|302|annexin A2##BC066955|ANXA2|302|annexin A2##BC093056|ANXA2|302|annexin A2##D28364|ANXA2|302|annexin A2##NM_001002857|ANXA2|302|annexin A2##NM_001002858|ANXA2|302|annexin A2##NM_001136015|ANXA2|302|annexin A2##NM_004039|ANXA2|302|annexin A2##BC016774|ANXA2|302|annexin A2##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A	0.080686	
chr3	46968773	46968954	reg1024696.p2	5.257	+	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	-45121	+	BC112221 BC112247 NM_000316 U17418 X68596	-49614	+	AF174483 CU679491 X07373 M24122 AK312044 BC009790 NM_000258	-63938	-	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	49382	-	TSC_hg19_v1_chr3_+_47021155 NM_015175 AK131104 AB384492	52384	+	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	60607	+	BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor##BC112221|PTH1R|5745|parathyroid hormone 1 receptor##BC112247|PTH1R|5745|parathyroid hormone 1 receptor##NM_000316|PTH1R|5745|parathyroid hormone 1 receptor##U17418|PTH1R|5745|parathyroid hormone 1 receptor##X68596|PTH1R|5745|parathyroid hormone 1 receptor##AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12##NM_015175|NBEAL2|23218|neurobeachin-like 2##AK131104|NBEAL2|23218|neurobeachin-like 2##AK092871|NBEAL2|23218|neurobeachin-like 2	0.0	
chr7	27973982	27974075	reg1022420.p2	5.257	+	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-194209	+	BC001764 TSC_hg19_v1_chr7_+_27779809	-194219	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	-194253	+	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	246173	-	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	246378	-	L05913 NM_182899	364911	+	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5	0.051719	
chr8	41160528	41160609	reg1028962.p1	5.257	+	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	-405231	-	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	-1149550	+	AK128691 NM_194294	-1368095	+	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	6462	-	TSC_hg19_v1_chr8_+_41348077 NM_001174124 NM_016099	187505	+	TSC_hg19_v1_chr8_+_41348100 AK026613	187531	+	BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1##NM_001174124|GOLGA7|51125|golgin A7##NM_016099|GOLGA7|51125|golgin A7##AK026613|GOLGA7|51125|golgin A7	0.147791	
chr1	12112257	12112437	reg1022340.p2	5.256	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-32777	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-32813	+	FJ618905 NM_021933	-33049	+	M83554 NM_001243 BC136400 BC171762 S75768	11197	+	D86042 BC063482 NM_152942 BC073839 BC141804	73669	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	114714	+	AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr12	120570784	120570965	reg1023765.p1	5.256	+	TSC_hg19_v1_chr12_+_120554697 BC041995 AK130486	-16165	+	TSC_hg19_v1_chr12_-_120554632 NM_001167606 NM_006861	-16235	-	TSC_hg19_v1_chr12_-_120554558 AK300127	-16309	-	TSC_hg19_v1_chr12_-_120632504 AB587307 AK297271 BC153881 D86973 NM_006836	61614	-	BC019014 BC000087 TSC_hg19_v1_chr12_-_120638906 BC070194	68027	-	AK129754 AK222571 AK304674 BC107717 D28418 TSC_hg19_v1_chr12_-_120638911 AK222468 AK291109	68036	-	NM_001167606|RAB35|11021|RAB35, member RAS oncogene family##NM_006861|RAB35|11021|RAB35, member RAS oncogene family##AK300127|RAB35|11021|RAB35, member RAS oncogene family##AK297271|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##BC153881|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##D86973|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##NM_006836|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##BC019014|RPLP0|6175|ribosomal protein, large, P0##BC000087|RPLP0|6175|ribosomal protein, large, P0##BC070194|RPLP0|6175|ribosomal protein, large, P0##AK129754|RPLP0|6175|ribosomal protein, large, P0##AK222571|RPLP0|6175|ribosomal protein, large, P0##AK304674|RPLP0|6175|ribosomal protein, large, P0##BC107717|RPLP0|6175|ribosomal protein, large, P0##D28418|RPLP0|6175|ribosomal protein, large, P0##AK222468|RPLP0|6175|ribosomal protein, large, P0##AK291109|RPLP0|6175|ribosomal protein, large, P0	0.0	
chr18	5546796	5546910	reg1023991.p1	5.256	+	AF069072 AB023204 NM_012307 TSC_hg19_v1_chr18_-_5543997 AK128531	-2865	-	NM_001243704	-249802	-	TSC_hg19_v1_chr18_-_5296038 AK313236 BC057282 NM_001143823 NM_003409	-250750	-	TSC_hg19_v1_chr18_-_5630663 BC008377	83794	-	NM_001080209	345249	-	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	868062	-	AF069072|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AB023204|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_012307|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AK128531|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_001243704|ZFP161|7541|zinc finger protein 161 homolog (mouse)##AK313236|ZFP161|7541|zinc finger protein 161 homolog (mouse)##BC057282|ZFP161|7541|zinc finger protein 161 homolog (mouse)##NM_001143823|ZFP161|7541|zinc finger protein 161 homolog (mouse)##NM_003409|ZFP161|7541|zinc finger protein 161 homolog (mouse)##BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_001080209|TMEM200C|645369|transmembrane protein 200C##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)	0.0	
chr8	135856023	135856120	reg1025176.p2	5.256	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-130797	-	TSC_hg19_v1_chr8_-_135725053 AB463359	-130992	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	-147277	-	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	613587	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	614130	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	3653035	-	BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B	0.0	
chr14	23525455	23525597	reg1026065.p1	5.255	+	AK122797 NM_001099780 AB299437 AB590974	-14122	+	NM_001144932 NM_002797 NM_001130725	-21136	-	BT006777 S74378 D29011 BC004146 BX248299 AB528985 CU691272 TSC_hg19_v1_chr14_-_23504095 AK300714 BX538001 BC107720 BC057840 AK311895 AK225888	-21504	-	AK057922 BC110867 TSC_hg19_v1_chr14_-_23526749 AK307746 BX248750 BC142724 AK289576 NM_022478 NM_144985	1250	-	AF124727 BX247975 TSC_hg19_v1_chr14_-_23540768 AF124728	15224	-	TSC_hg19_v1_chr14_-_23540779 NM_001164816 NM_001164817	15257	-	AK122797|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##NM_001099780|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##AB299437|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##NM_001144932|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_002797|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_001130725|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BT006777|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##S74378|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BX248299|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK300714|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BX538001|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BC107720|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BC057840|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK311895|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK225888|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK057922|CDH24|64403|cadherin 24, type 2##BC110867|CDH24|64403|cadherin 24, type 2##AK307746|CDH24|64403|cadherin 24, type 2##BX248750|CDH24|64403|cadherin 24, type 2##BC142724|CDH24|64403|cadherin 24, type 2##AK289576|CDH24|64403|cadherin 24, type 2##NM_022478|CDH24|64403|cadherin 24, type 2##NM_144985|CDH24|64403|cadherin 24, type 2##AF124727|ACIN1|22985|apoptotic chromatin condensation inducer 1##BX247975|ACIN1|22985|apoptotic chromatin condensation inducer 1##AF124728|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164816|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164817|ACIN1|22985|apoptotic chromatin condensation inducer 1	0.880021	CTCF.p2:9:0.880
chr22	18281018	18281198	reg1026301.p1	5.255	+	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-23774	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-23885	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	-23901	-	TSC_hg19_v1_chr22_-_18484268 AK127487	203120	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	226153	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	279580	+	BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26	0.0	
chr22	47077057	47077164	reg1024479.p1	5.255	+	CR456470 NM_015124 BC129837 AB463563 CU013020 CU013308	-54434	+	AF231024 NM_014246 TSC_hg19_v1_chr22_-_46933142	-143996	-	TSC_hg19_v1_chr22_+_46731810 AK303020	-345300	+	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	56969	-	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	57045	-	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	81490	+	CR456470|GRAMD4|23151|GRAM domain containing 4##NM_015124|GRAMD4|23151|GRAM domain containing 4##BC129837|GRAMD4|23151|GRAM domain containing 4##AF231024|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##NM_014246|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##AK303020|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase##NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A	0.0	
chr2	68614979	68615160	reg1024443.p2	5.255	+	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	-22612	+	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	-22697	+	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	-67969	-	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	79341	-	TSC_hg19_v1_chr2_+_68694716 AK290841 NM_173545 AK308186 BC041144 CU691972	79695	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	257884	+	DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48##AK290841|APLF|200558|aprataxin and PNKP like factor##NM_173545|APLF|200558|aprataxin and PNKP like factor##AK308186|APLF|200558|aprataxin and PNKP like factor##BC041144|APLF|200558|aprataxin and PNKP like factor##AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1	0.0	
chr3	147079744	147079853	reg1025959.p1	5.255	+	AY436642 NM_001085420	-755796	-	BC157886 BC171917 TSC_hg19_v1_chr3_-_146323105	-756731	-	TSC_hg19_v1_chr3_-_146262505 AF098642 AB006746 NM_021105	-817274	-	BC041954 TSC_hg19_v1_chr3_+_147111244	31434	+	AK294831 NM_001168378	42272	-	AK293981 NM_001168379	43508	-	AY436642|PLSCR5|389158|phospholipid scramblase family, member 5##NM_001085420|PLSCR5|389158|phospholipid scramblase family, member 5##BC157886|PLSCR5|389158|phospholipid scramblase family, member 5##BC171917|PLSCR5|389158|phospholipid scramblase family, member 5##AF098642|PLSCR1|5359|phospholipid scramblase 1##AB006746|PLSCR1|5359|phospholipid scramblase 1##NM_021105|PLSCR1|5359|phospholipid scramblase 1##AK294831|ZIC4|84107|Zic family member 4##NM_001168378|ZIC4|84107|Zic family member 4##AK293981|ZIC4|84107|Zic family member 4##NM_001168379|ZIC4|84107|Zic family member 4	0.898021	CTCF.p2:7:0.898
chr7	101705197	101705377	reg1024554.p1	5.255	+	M74099 NM_181552	-244406	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-246078	+	BC002778 NM_138403	-432712	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	223110	+	TSC_hg19_v1_chr7_+_101928431 AB000520	223156	+	NM_001146210	291601	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.041782	
chr5	33934007	33934188	reg1005177.p1	5.254	+	TSC_hg19_v1_chr5_-_33892294 AJ250725	-41802	-	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	-42052	-	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	-492958	+	D88437 NM_016568	2393	+	CU687878 CU678524 AF172849 BC064405 BC003597 NM_001012509 NM_016180	50636	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	74066	-	AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##D88437|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##NM_016568|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##AF172849|SLC45A2|51151|solute carrier family 45, member 2##BC064405|SLC45A2|51151|solute carrier family 45, member 2##BC003597|SLC45A2|51151|solute carrier family 45, member 2##NM_001012509|SLC45A2|51151|solute carrier family 45, member 2##NM_016180|SLC45A2|51151|solute carrier family 45, member 2##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase	0.0	
chr6	52455214	52455359	reg1029097.p1	5.254	+	AK095117 TSC_hg19_v1_chr6_+_52442225	-13112	+	TSC_hg19_v1_chr6_-_52441859 AK291751 AB621814 BC028121 NM_012288	-13435	-	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	-13528	-	TSC_hg19_v1_chr6_+_52529228 AK091117	73942	+	TSC_hg19_v1_chr6_+_52535913 NM_014051 AF239771 AK312063 BC015097 BC019328	80637	+	AK292602 AK313601 M16594 BC002895 NM_000846	173030	-	AK095117|FLJ37798|401264|uncharacterized LOC401264##AK291751|TRAM2|9697|translocation associated membrane protein 2##BC028121|TRAM2|9697|translocation associated membrane protein 2##NM_012288|TRAM2|9697|translocation associated membrane protein 2##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2##AK091117|LOC730101|730101|uncharacterized LOC730101##NM_014051|TMEM14A|28978|transmembrane protein 14A##AF239771|TMEM14A|28978|transmembrane protein 14A##AK312063|TMEM14A|28978|transmembrane protein 14A##BC015097|TMEM14A|28978|transmembrane protein 14A##BC019328|TMEM14A|28978|transmembrane protein 14A##AK292602|GSTA2|2939|glutathione S-transferase alpha 2##AK313601|GSTA2|2939|glutathione S-transferase alpha 2##M16594|GSTA2|2939|glutathione S-transferase alpha 2##BC002895|GSTA2|2939|glutathione S-transferase alpha 2##NM_000846|GSTA2|2939|glutathione S-transferase alpha 2	0.0	
chr3	149205522	149205639	reg1027449.p1	5.253	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-13091	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-13178	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-110038	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	170155	-	AK022036 NM_001168278	215479	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	264659	-	AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2	0.0	
chr4	116977803	116977909	reg1022975.p1	5.253	+	BC113075 BC012326 AK289670 AB036429 NM_022569	-942875	-	NM_003360 U30930	-1434334	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-1458273	+	AK074617 BC030831 NM_152402	1028877	-	TSC_hg19_v1_chr4_+_118954764 AY358852	1976915	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	1977719	+	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.923578	CTCF.p2:-76:0.924
chr5	14364872	14364970	reg1022462.p2	5.253	+	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	-221249	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-353051	-	AX800026 AY045575 NM_001369	-420333	-	TSC_hg19_v1_chr5_+_14488527 AK131423	123618	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	216979	+	TSC_hg19_v1_chr5_+_14581949 AK001989 BC011524 CU679940	217043	+	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A##AK001989|FAM105A|54491|family with sequence similarity 105, member A##BC011524|FAM105A|54491|family with sequence similarity 105, member A	0.985098	CTCF.p2:-15:0.985
chr5	58956717	58956817	reg1025604.p2	5.253	+	U50159 NM_006203 L20970	-74468	-	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	-304024	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	-384837	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	107581	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	107688	-	NM_001104631	232853	-	U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.862702	CTCF.p2:17:0.863
chr11	30068183	30068332	reg1027711.p1	5.252	+	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	-29726	-	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-1936404	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-1938379	+	NM_000510 NM_001018080	184305	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	276395	+	CU689190 NM_001584 U57911	533722	-	M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46##NM_001584|MPPED2|744|metallophosphoesterase domain containing 2##U57911|MPPED2|744|metallophosphoesterase domain containing 2	0.083296	
chr12	113671172	113671295	reg1024021.p2	5.252	+	TSC_hg19_v1_chr12_+_113659290 BC142664 AK057414 BC150203	-11930	+	AB032995 BC152423 TSC_hg19_v1_chr12_+_113659278 BC136795 BC136796	-11953	+	TSC_hg19_v1_chr12_+_113659268 AK093490 AX748162 NM_001143819 NM_017901 AY083666	-11990	+	BC098174 BC098360 TSC_hg19_v1_chr12_-_113772887	101628	-	TSC_hg19_v1_chr12_-_113772942 NM_024959 AK056179	101692	-	BC002929 BC071832 NM_001159727 NM_173542 TSC_hg19_v1_chr12_+_113796372	125138	+	BC142664|TPCN1|53373|two pore segment channel 1##AK057414|TPCN1|53373|two pore segment channel 1##BC150203|TPCN1|53373|two pore segment channel 1##AB032995|TPCN1|53373|two pore segment channel 1##BC152423|TPCN1|53373|two pore segment channel 1##BC136795|TPCN1|53373|two pore segment channel 1##BC136796|TPCN1|53373|two pore segment channel 1##AK093490|TPCN1|53373|two pore segment channel 1##NM_001143819|TPCN1|53373|two pore segment channel 1##NM_017901|TPCN1|53373|two pore segment channel 1##AY083666|TPCN1|53373|two pore segment channel 1##BC098360|SLC24A6|80024|solute carrier family 24 (sodium/potassium/calcium exchanger), member 6##NM_024959|SLC24A6|80024|solute carrier family 24 (sodium/potassium/calcium exchanger), member 6##AK056179|SLC24A6|80024|solute carrier family 24 (sodium/potassium/calcium exchanger), member 6##NM_001159727|PLBD2|196463|phospholipase B domain containing 2##NM_173542|PLBD2|196463|phospholipase B domain containing 2	0.624589	CTCF.p2:17:0.625
chr20	49204801	49204927	reg1027884.p1	5.252	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	-77859	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-77932	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-77945	+	AK056792 NM_080829	48561	-	TSC_hg19_v1_chr20_-_49308074 AK124347	103213	-	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	143205	+	BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	0.99846	CTCF.p2:-2:0.998
chr3	139770267	139770447	reg1022950.p1	5.252	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-116105	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-116339	+	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	-373529	-	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	626602	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	890410	+	TSC_hg19_v1_chr3_+_140770412 BC051354	1000121	+	AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.95251	CTCF.p2:24:0.953
chr4	9900399	9900526	reg1031677.p1	5.252	+	NM_000798	-117205	+	AF529414 NM_001040448	-454203	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-535609	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	122662	-	AK310895 BC018897 NM_001001290 AK096819	141460	-	TSC_hg19_v1_chr4_-_10118286 AB385044 CU674086 CU677992	217825	-	NM_000798|DRD5|1816|dopamine receptor D5##AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.020538	
chr6	143105582	143105727	reg1026350.p1	5.252	+	TSC_hg19_v1_chr6_+_142623443 BX640873	-482248	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-482585	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-595025	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	160674	-	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	276341	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	276382	+	BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1	0.0	
chr8	87524160	87524240	reg1025833.p2	5.252	+	TSC_hg19_v1_chr8_-_87520981 NM_016033	-3204	-	CU679433 BX640636 AK303122 TSC_hg19_v1_chr8_-_87520885 BC009671 AK297896 AF151848 AK000672	-3287	-	TSC_hg19_v1_chr8_+_87354966 AY345857 AK292800 BC036065 NM_007013	-169150	+	TSC_hg19_v1_chr8_+_87526660 NM_003909	2453	+	AK292912 BC007017 BC008385 TSC_hg19_v1_chr8_+_87526694 BC066597 BC036242 AB014536 AF077226	2511	+	BC150601 AF272900 NM_019098 DQ426865	231712	-	NM_016033|FAM82B|51115|family with sequence similarity 82, member B##BX640636|FAM82B|51115|family with sequence similarity 82, member B##AK303122|FAM82B|51115|family with sequence similarity 82, member B##BC009671|FAM82B|51115|family with sequence similarity 82, member B##AK297896|FAM82B|51115|family with sequence similarity 82, member B##AF151848|FAM82B|51115|family with sequence similarity 82, member B##AK000672|FAM82B|51115|family with sequence similarity 82, member B##AY345857|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##AK292800|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##BC036065|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##NM_007013|WWP1|11059|WW domain containing E3 ubiquitin protein ligase 1##NM_003909|CPNE3|8895|copine III##AK292912|CPNE3|8895|copine III##BC007017|CPNE3|8895|copine III##BC008385|CPNE3|8895|copine III##BC066597|CPNE3|8895|copine III##BC036242|CPNE3|8895|copine III##AB014536|CPNE3|8895|copine III##AF077226|CPNE3|8895|copine III##BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3##AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3##NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3	0.284351	CTCF.p2:7:0.284
chr9	19922609	19922773	reg1028314.p2	5.252	+	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-135740	-	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-513688	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-542464	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	699757	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	699805	-	AK056522 AY139834 NM_017794	735616	+	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797	0.0	
chr11	1874203	1874378	reg1025159.p2	5.251	+	NM_002339 TSC_hg19_v1_chr11_+_1874296 AK222733 BC001785 X55188 AK290279 S67783 CR541728 CR541754 CU674886	-4	+	NM_001145841	-12859	+	BC032148 NM_001145829	-13572	+	AK092071 AX747343 NM_001242932	12104	+	NM_001013253	15612	+	NM_001013254 NM_001013255	17835	+	NM_002339|LSP1|4046|lymphocyte-specific protein 1##AK222733|LSP1|4046|lymphocyte-specific protein 1##BC001785|LSP1|4046|lymphocyte-specific protein 1##X55188|LSP1|4046|lymphocyte-specific protein 1##AK290279|LSP1|4046|lymphocyte-specific protein 1##S67783|LSP1|4046|lymphocyte-specific protein 1##CR541728|LSP1|4046|lymphocyte-specific protein 1##CR541754|LSP1|4046|lymphocyte-specific protein 1##NM_001145841|TNNI2|7136|troponin I type 2 (skeletal, fast)##BC032148|TNNI2|7136|troponin I type 2 (skeletal, fast)##NM_001145829|TNNI2|7136|troponin I type 2 (skeletal, fast)##AK092071|LSP1|4046|lymphocyte-specific protein 1##NM_001242932|LSP1|4046|lymphocyte-specific protein 1##NM_001013253|LSP1|4046|lymphocyte-specific protein 1##NM_001013254|LSP1|4046|lymphocyte-specific protein 1##NM_001013255|LSP1|4046|lymphocyte-specific protein 1	0.712778	CTCF.p2:-39:0.713
chr1	226612331	226612435	reg1023753.p1	5.251	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-16580	-	AK303340 M32721 TSC_hg19_v1_chr1_-_226595791	-16593	-	BC037545 TSC_hg19_v1_chr1_-_226595774 BC008660 BC014206	-16606	-	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	124118	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	124234	+	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	314555	-	NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##AK303340|PARP1|142|poly (ADP-ribose) polymerase 1##M32721|PARP1|142|poly (ADP-ribose) polymerase 1##BC037545|PARP1|142|poly (ADP-ribose) polymerase 1##BC008660|PARP1|142|poly (ADP-ribose) polymerase 1##BC014206|PARP1|142|poly (ADP-ribose) polymerase 1##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B	0.854787	CTCF.p2:-8:0.855
chr20	46082279	46082437	reg1023992.p1	5.251	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-96870	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-105711	-	TSC_hg19_v1_chr20_-_45927496 BC030721	-154789	-	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	48264	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	48326	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	332394	-	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2	0.0	
chr9	17063708	17063802	reg1027734.p1	5.251	+	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	-192989	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	-193088	-	TSC_hg19_v1_chr9_-_16727889 AY438376	-335858	-	TSC_hg19_v1_chr9_+_17134988 AK303973 AK308837 BX647069 AK098502 NM_001114395 NM_017738	71262	+	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	515341	+	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	1410333	+	CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##AY438376|BNC2|54796|basonuclin 2##AK303973|CNTLN|54875|centlein, centrosomal protein##AK308837|CNTLN|54875|centlein, centrosomal protein##BX647069|CNTLN|54875|centlein, centrosomal protein##AK098502|CNTLN|54875|centlein, centrosomal protein##NM_001114395|CNTLN|54875|centlein, centrosomal protein##NM_017738|CNTLN|54875|centlein, centrosomal protein##AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1	0.997419	CTCF.p2:-17:0.997
chr8	71520477	71520587	reg1019527.p1	5.250	+	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	-10	-	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	-204506	-	BC092442 TSC_hg19_v1_chr8_-_71315599	-204985	-	TSC_hg19_v1_chr8_-_71520654 AK303411 NM_014294	124	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	60852	-	TSC_hg19_v1_chr8_-_71581419 BC000878 BC008505 NM_016027	60917	-	BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1##NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##BC092442|NCOA2|10499|nuclear receptor coactivator 2##AK303411|TRAM1|23471|translocation associated membrane protein 1##NM_014294|TRAM1|23471|translocation associated membrane protein 1##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2##BC000878|LACTB2|51110|lactamase, beta 2##BC008505|LACTB2|51110|lactamase, beta 2##NM_016027|LACTB2|51110|lactamase, beta 2	0.296826	CTCF.p2:-15:0.297
chr10	19701589	19701710	reg1024080.p2	5.249	+	TSC_hg19_v1_chr10_+_18948359 NM_178815 BC024163 AK027275 AF494061 DQ893166 DQ896464	-753228	+	BC033534 TSC_hg19_v1_chr10_-_18948215	-753452	-	AK074323 BC035778 NM_182543	-761117	-	TSC_hg19_v1_chr10_+_20105360 AK304591 AY358486 NM_032812	403724	+	NM_006393 Y16241	1484881	-	BC140744 BC144447 NM_001010896 NM_001177483	1733838	-	NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B##BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B##AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B##AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B##AK074323|NSUN6|221078|NOP2/Sun domain family, member 6##BC035778|NSUN6|221078|NOP2/Sun domain family, member 6##NM_182543|NSUN6|221078|NOP2/Sun domain family, member 6##AK304591|PLXDC2|84898|plexin domain containing 2##AY358486|PLXDC2|84898|plexin domain containing 2##NM_032812|PLXDC2|84898|plexin domain containing 2##NM_006393|NEBL|10529|nebulette##Y16241|NEBL|10529|nebulette##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113	0.803975	CTCF.p2:-1:0.804
chr1	172359925	172360079	reg1026039.p2	5.249	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-549299	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-609164	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-609188	+	AL035295 NM_139240 BC038410	29826	+	TSC_hg19_v1_chr1_-_172413202 BC006539	53186	-	TSC_hg19_v1_chr1_-_172413207 AK308201	53205	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.0	
chr1	25071377	25071518	reg1024388.p1	5.249	+	TSC_hg19_v1_chr1_+_24969795 AF048977 BC017315	-101643	+	TSC_hg19_v1_chr1_+_24969792 AK302498	-101668	+	TSC_hg19_v1_chr1_+_24969763 BC011019 BC036187	-101709	+	NM_013943 TSC_hg19_v1_chr1_+_25071875 AL117424 AK001624 AK095959 BC012444 AF097330	384	+	TSC_hg19_v1_chr1_+_25071937 AK315051 AK301466 AK307142	486	+	TSC_hg19_v1_chr1_+_25071976 AF109196 AB463494 AM393644 CU680328 CR533501	558	+	AF048977|SRRM1|10250|serine/arginine repetitive matrix 1##BC017315|SRRM1|10250|serine/arginine repetitive matrix 1##AK302498|SRRM1|10250|serine/arginine repetitive matrix 1##BC011019|SRRM1|10250|serine/arginine repetitive matrix 1##BC036187|SRRM1|10250|serine/arginine repetitive matrix 1##NM_013943|CLIC4|25932|chloride intracellular channel 4##AL117424|CLIC4|25932|chloride intracellular channel 4##AK001624|CLIC4|25932|chloride intracellular channel 4##AK095959|CLIC4|25932|chloride intracellular channel 4##BC012444|CLIC4|25932|chloride intracellular channel 4##AF097330|CLIC4|25932|chloride intracellular channel 4##AK315051|CLIC4|25932|chloride intracellular channel 4##AK301466|CLIC4|25932|chloride intracellular channel 4##AK307142|CLIC4|25932|chloride intracellular channel 4##AF109196|CLIC4|25932|chloride intracellular channel 4##AM393644|CLIC4|25932|chloride intracellular channel 4##CR533501|CLIC4|25932|chloride intracellular channel 4	0.0	
chr3	47324033	47324213	reg1020845.p3	5.249	+	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	-118684	-	TSC_hg19_v1_chr3_-_47098906 AK026837	-225180	-	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	-294653	+	BC015311 NM_001134878 NM_022342 NM_182902	172	-	NM_025010 TSC_hg19_v1_chr3_+_47324433 AK023765 AK291477 AK295292 BX537953 BC015962 AB527175 AM393269 AM393767 BC032620	305	+	AB040904 NM_015466 TSC_hg19_v1_chr3_+_47422510 AK055157 AK299906 AK295888 AK289502 AB025194 AF290614 AK295877 BC089042	98409	+	AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2##AK026837|SETD2|29072|SET domain containing 2##AK092871|NBEAL2|23218|neurobeachin-like 2##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9##NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)##AK023765|KLHL18|23276|kelch-like 18 (Drosophila)##AK291477|KLHL18|23276|kelch-like 18 (Drosophila)##AK295292|KLHL18|23276|kelch-like 18 (Drosophila)##BX537953|KLHL18|23276|kelch-like 18 (Drosophila)##BC015962|KLHL18|23276|kelch-like 18 (Drosophila)##AM393269|KLHL18|23276|kelch-like 18 (Drosophila)##AM393767|KLHL18|23276|kelch-like 18 (Drosophila)##BC032620|KLHL18|23276|kelch-like 18 (Drosophila)##AB040904|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_015466|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK055157|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK299906|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295888|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK289502|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AB025194|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AF290614|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295877|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##BC089042|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23	0.0	
chr7	134681034	134681204	reg1028871.p2	5.249	+	TSC_hg19_v1_chr7_+_134671258 AK302827 NM_178563 BC030651 AL832281 AK023045 AK311252	-9834	+	BC014035 TSC_hg19_v1_chr7_+_134576197 BC061926 BC005006 D90452 D90453	-104846	+	NM_033139 NM_033140 TSC_hg19_v1_chr7_+_134576161	-104964	+	NM_018295 TSC_hg19_v1_chr7_+_134832838 AK001862 AK225055 AK301268 BC020942	151728	+	NM_001243753 NM_001243755	173106	-	TSC_hg19_v1_chr7_-_134855252 NM_001243752	174148	-	AK302827|AGBL3|340351|ATP/GTP binding protein-like 3##NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3##BC030651|AGBL3|340351|ATP/GTP binding protein-like 3##AL832281|AGBL3|340351|ATP/GTP binding protein-like 3##AK023045|AGBL3|340351|ATP/GTP binding protein-like 3##BC014035|CALD1|800|caldesmon 1##BC061926|CALD1|800|caldesmon 1##BC005006|CALD1|800|caldesmon 1##D90452|CALD1|800|caldesmon 1##D90453|CALD1|800|caldesmon 1##NM_033139|CALD1|800|caldesmon 1##NM_033140|CALD1|800|caldesmon 1##NM_018295|TMEM140|55281|transmembrane protein 140##AK001862|TMEM140|55281|transmembrane protein 140##AK225055|TMEM140|55281|transmembrane protein 140##AK301268|TMEM140|55281|transmembrane protein 140##BC020942|TMEM140|55281|transmembrane protein 140##NM_001243753|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243755|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243752|C7orf49|78996|chromosome 7 open reading frame 49	0.0	
chr9	20423348	20423498	reg1026644.p2	5.249	+	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-636472	-	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-1014420	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-1043196	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	199025	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	199073	-	AK056522 AY139834 NM_017794	234884	+	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797	0.100365	
chrX	119798057	119798238	reg1019604.p1	5.249	+	TSC_hg19_v1_chrX_-_119763907 BC011930 AY358642 AF161552 AY159319 AB084170 AF177284 AK290111 BC012502 BC050441 AJ238398 NM_001011551 NM_152692	-34243	-	TSC_hg19_v1_chrX_+_119738553 NM_001137554 AK294834	-59585	+	TSC_hg19_v1_chrX_+_119737985 BC001013 CU674498 AY364258	-60110	+	NM_001145718	211631	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	268003	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080141 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	272864	-	BC011930|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AY358642|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AF161552|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AY159319|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AB084170|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AF177284|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AK290111|C1GALT1C1|29071|C1GALT1-specific chaperone 1##BC012502|C1GALT1C1|29071|C1GALT1-specific chaperone 1##BC050441|C1GALT1C1|29071|C1GALT1-specific chaperone 1##AJ238398|C1GALT1C1|29071|C1GALT1-specific chaperone 1##NM_001011551|C1GALT1C1|29071|C1GALT1-specific chaperone 1##NM_152692|C1GALT1C1|29071|C1GALT1-specific chaperone 1##NM_001137554|MCTS1|28985|malignant T cell amplified sequence 1##AK294834|MCTS1|28985|malignant T cell amplified sequence 1##BC001013|MCTS1|28985|malignant T cell amplified sequence 1##AY364258|MCTS1|28985|malignant T cell amplified sequence 1##NM_001145718|CT47B1|643311|cancer/testis antigen family 47, member B1##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11	0.993073	CTCF.p2:14:0.993
chr14	74208348	74208524	reg1025404.p2	5.248	+	CR457112 BC039577 AK290980 TSC_hg19_v1_chr14_-_74181085 AF320308 BC007712 NM_006029	-27675	-	NM_001201366 NM_031427 AF542071 BC005343 AL833654 AK315392	-96783	+	DQ082756 NM_001037162	-124889	+	BC015668 TSC_hg19_v1_chr14_-_74226640	18202	-	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	18529	-	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	45483	-	CR457112|PNMA1|9240|paraneoplastic antigen MA1##BC039577|PNMA1|9240|paraneoplastic antigen MA1##AK290980|PNMA1|9240|paraneoplastic antigen MA1##AF320308|PNMA1|9240|paraneoplastic antigen MA1##BC007712|PNMA1|9240|paraneoplastic antigen MA1##NM_006029|PNMA1|9240|paraneoplastic antigen MA1##NM_001201366|DNAL1|83544|dynein, axonemal, light chain 1##NM_031427|DNAL1|83544|dynein, axonemal, light chain 1##AF542071|DNAL1|83544|dynein, axonemal, light chain 1##BC005343|DNAL1|83544|dynein, axonemal, light chain 1##AL833654|DNAL1|83544|dynein, axonemal, light chain 1##AK315392|DNAL1|83544|dynein, axonemal, light chain 1##DQ082756|ACOT6|641372|acyl-CoA thioesterase 6##NM_001037162|ACOT6|641372|acyl-CoA thioesterase 6##BC015668|C14orf43|91748|chromosome 14 open reading frame 43##AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43	0.0	
chr20	47178118	47178251	reg1028469.p2	5.248	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-762866	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-763432	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1047500	+	AB037836 TSC_hg19_v1_chr20_-_47444291	266102	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	266255	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	360134	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr9	109048681	109048836	reg1024892.p1	5.248	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-591840	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	-591905	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	-624001	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	576606	+	TSC_hg19_v1_chr9_+_109686439 CR749850	637711	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	996774	+	AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##CR749850|ZNF462|58499|zinc finger protein 462##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.132081	
chr14	104467477	104467599	reg1027909.p1	5.247	+	TSC_hg19_v1_chr14_+_104394792 NM_153046	-72755	+	AK310120 TSC_hg19_v1_chr14_-_104387867 AK309355 AK312099 AF054175 AK309499 DQ426862 NM_001127393 NM_004894	-79659	-	BX161388 TSC_hg19_v1_chr14_-_104387847 BC047289 BC063419 BC000429 BC001944	-79693	-	AX781433 BX247999 NM_001080464 AX721044 BC035836 BC136637 AX781428 AX781429 AX781430 AX781431 AX781435	84523	+	NM_015656	137521	+	TSC_hg19_v1_chr14_+_104605441 AB033062	137914	+	NM_153046|TDRD9|122402|tudor domain containing 9##AK310120|C14orf2|9556|chromosome 14 open reading frame 2##AK309355|C14orf2|9556|chromosome 14 open reading frame 2##AK312099|C14orf2|9556|chromosome 14 open reading frame 2##AF054175|C14orf2|9556|chromosome 14 open reading frame 2##AK309499|C14orf2|9556|chromosome 14 open reading frame 2##DQ426862|C14orf2|9556|chromosome 14 open reading frame 2##NM_001127393|C14orf2|9556|chromosome 14 open reading frame 2##NM_004894|C14orf2|9556|chromosome 14 open reading frame 2##BX161388|C14orf2|9556|chromosome 14 open reading frame 2##BC047289|C14orf2|9556|chromosome 14 open reading frame 2##BC063419|C14orf2|9556|chromosome 14 open reading frame 2##BC000429|C14orf2|9556|chromosome 14 open reading frame 2##BC001944|C14orf2|9556|chromosome 14 open reading frame 2##AX781433|ASPG|374569|asparaginase homolog (S. cerevisiae)##BX247999|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_001080464|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC035836|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC136637|ASPG|374569|asparaginase homolog (S. cerevisiae)##AX781435|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_015656|KIF26A|26153|kinesin family member 26A##AB033062|KIF26A|26153|kinesin family member 26A	0.588434	CTCF.p2:16:0.588
chr21	34366788	34366896	reg1025105.p2	5.247	+	BC069689 BC069709 BC069766 BC069779 AF231922 AK290983 DQ656042 NM_001162495 NM_001162496 NM_019596	-180845	-	AK096601 BC034794 TSC_hg19_v1_chr21_+_34144471 BC117397 BC117399	-222379	+	AY033903 AY033904 AY033905 AY033906 TSC_hg19_v1_chr21_-_34144044 AJ279080 AJ279081 AK309404 BC030539 BC084542 BC062992 NM_013329 NM_016631	-222768	-	TSC_hg19_v1_chr21_+_34398242 NM_005806 AK091462 BC047511 BC036245 BC034681 BC036275 AF221520	31409	+	TSC_hg19_v1_chr21_+_34442446 BC033290 NM_138983 AL834450 AB209791	75610	+	TSC_hg19_v1_chr21_+_34442554 AB463154 DQ896828 BC026989	75719	+	BC069689|C21orf62|56245|chromosome 21 open reading frame 62##BC069709|C21orf62|56245|chromosome 21 open reading frame 62##BC069766|C21orf62|56245|chromosome 21 open reading frame 62##BC069779|C21orf62|56245|chromosome 21 open reading frame 62##AF231922|C21orf62|56245|chromosome 21 open reading frame 62##AK290983|C21orf62|56245|chromosome 21 open reading frame 62##DQ656042|C21orf62|56245|chromosome 21 open reading frame 62##NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62##NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62##NM_019596|C21orf62|56245|chromosome 21 open reading frame 62##AK096601|C21orf49|54067|chromosome 21 open reading frame 49##BC034794|C21orf49|54067|chromosome 21 open reading frame 49##BC117397|C21orf49|54067|chromosome 21 open reading frame 49##BC117399|C21orf49|54067|chromosome 21 open reading frame 49##AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_005806|OLIG2|10215|oligodendrocyte lineage transcription factor 2##AK091462|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC047511|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC036245|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC034681|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC036275|OLIG2|10215|oligodendrocyte lineage transcription factor 2##AF221520|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC033290|OLIG1|116448|oligodendrocyte transcription factor 1##NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1##AL834450|OLIG1|116448|oligodendrocyte transcription factor 1##AB209791|OLIG1|116448|oligodendrocyte transcription factor 1##DQ896828|OLIG1|116448|oligodendrocyte transcription factor 1##BC026989|OLIG1|116448|oligodendrocyte transcription factor 1	0.095155	
chr2	14024832	14024929	reg1023047.p1	5.247	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-1166483	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	-1166964	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-1167627	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	747941	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	747971	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	1676549	-	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence	0.0	
chr22	45224190	45224291	reg1023392.p1	5.247	+	AK001306 NM_001017526 NM_001198726 NM_181335 BC059382 BC067824 BC048280	-75779	+	AK291564 TSC_hg19_v1_chr22_+_45098246 AF177331 AL355192 NM_181334	-125987	+	TSC_hg19_v1_chr22_+_45098090 NM_181333	-126172	+	TSC_hg19_v1_chr22_-_45404785 AK299836 AK297317 AK091480 AX747013 NM_001242450	180589	-	AB489146 CU012999 CU013287 CU680262 CR456448 BC012187 NM_138415	181264	-	TSC_hg19_v1_chr22_-_45405781 AK092243 AX747427 NM_001135862	181554	-	AK001306|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001017526|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001198726|ARHGAP8|23779|Rho GTPase activating protein 8##NM_181335|ARHGAP8|23779|Rho GTPase activating protein 8##BC059382|ARHGAP8|23779|Rho GTPase activating protein 8##BC067824|ARHGAP8|23779|Rho GTPase activating protein 8##BC048280|ARHGAP8|23779|Rho GTPase activating protein 8##AK291564|PRR5|55615|proline rich 5 (renal)##AF177331|PRR5|55615|proline rich 5 (renal)##AL355192|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181334|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181333|PRR5|55615|proline rich 5 (renal)##AK299836|PHF21B|112885|PHD finger protein 21B##AK297317|PHF21B|112885|PHD finger protein 21B##AK091480|PHF21B|112885|PHD finger protein 21B##NM_001242450|PHF21B|112885|PHD finger protein 21B##CU012999|PHF21B|112885|PHD finger protein 21B##CU013287|PHF21B|112885|PHD finger protein 21B##CR456448|PHF21B|112885|PHD finger protein 21B##BC012187|PHF21B|112885|PHD finger protein 21B##NM_138415|PHF21B|112885|PHD finger protein 21B##AK092243|PHF21B|112885|PHD finger protein 21B##NM_001135862|PHF21B|112885|PHD finger protein 21B	0.68599	CTCF.p2:12:0.686
chr6	129993187	129993354	reg1009478.p2	5.247	+	NM_000426 NM_001079823 Z26653	-788957	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-1151614	-	AK124031 NM_001164687	-1753512	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	38056	-	NM_001010876	189145	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	346455	+	NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	0.0	
chr10	94350587	94350689	reg1026893.p2	5.246	+	TSC_hg19_v1_chr10_-_94333847 NM_004969	-16771	-	TSC_hg19_v1_chr10_-_94333845 M21188	-16801	-	TSC_hg19_v1_chr10_-_94333800 AB527891 AK312810 BC096336 BC096337 BC096338 BC096339 BC036188	-16864	-	TSC_hg19_v1_chr10_+_94352824 NM_004523	2178	+	TSC_hg19_v1_chr10_+_94352886 BC050421 BC050667 AK314258	2259	+	TSC_hg19_v1_chr10_+_94352960 BC126211 BC136474 U37426 X85137	2405	+	NM_004969|IDE|3416|insulin-degrading enzyme##M21188|IDE|3416|insulin-degrading enzyme##AK312810|IDE|3416|insulin-degrading enzyme##BC096336|IDE|3416|insulin-degrading enzyme##BC096337|IDE|3416|insulin-degrading enzyme##BC096338|IDE|3416|insulin-degrading enzyme##BC096339|IDE|3416|insulin-degrading enzyme##BC036188|IDE|3416|insulin-degrading enzyme##NM_004523|KIF11|3832|kinesin family member 11##BC050421|KIF11|3832|kinesin family member 11##BC050667|KIF11|3832|kinesin family member 11##AK314258|KIF11|3832|kinesin family member 11##BC126211|KIF11|3832|kinesin family member 11##BC136474|KIF11|3832|kinesin family member 11##U37426|KIF11|3832|kinesin family member 11##X85137|KIF11|3832|kinesin family member 11	0.785275	CTCF.p2:0:0.785
chr11	46368854	46368962	reg1025966.p2	5.246	+	TSC_hg19_v1_chr11_+_46367020 AK300577	-1872	+	TSC_hg19_v1_chr11_+_46366983 AK123378 BX648433	-1924	+	NM_201533 TSC_hg19_v1_chr11_+_46366981 AK303322	-2010	+	TSC_hg19_v1_chr11_+_46369117 NM_001199266 NM_001199267 NM_001199268 NM_003646 AK225774 U51477 BC041770 AK293615 AK294888 AK312398	116	+	TSC_hg19_v1_chr11_+_46383155 NM_001105540 U94905	14227	+	AK309963 AK308210 TSC_hg19_v1_chr11_+_46402507 AK130889 NM_001012334	33567	+	AK300577|DGKZ|8525|diacylglycerol kinase, zeta##AK123378|DGKZ|8525|diacylglycerol kinase, zeta##BX648433|DGKZ|8525|diacylglycerol kinase, zeta##NM_201533|DGKZ|8525|diacylglycerol kinase, zeta##AK303322|DGKZ|8525|diacylglycerol kinase, zeta##NM_001199266|DGKZ|8525|diacylglycerol kinase, zeta##NM_001199267|DGKZ|8525|diacylglycerol kinase, zeta##NM_001199268|DGKZ|8525|diacylglycerol kinase, zeta##NM_003646|DGKZ|8525|diacylglycerol kinase, zeta##AK225774|DGKZ|8525|diacylglycerol kinase, zeta##U51477|DGKZ|8525|diacylglycerol kinase, zeta##BC041770|DGKZ|8525|diacylglycerol kinase, zeta##AK293615|DGKZ|8525|diacylglycerol kinase, zeta##AK294888|DGKZ|8525|diacylglycerol kinase, zeta##AK312398|DGKZ|8525|diacylglycerol kinase, zeta##NM_001105540|DGKZ|8525|diacylglycerol kinase, zeta##U94905|DGKZ|8525|diacylglycerol kinase, zeta##AK309963|MDK|4192|midkine (neurite growth-promoting factor 2)##AK308210|MDK|4192|midkine (neurite growth-promoting factor 2)##AK130889|MDK|4192|midkine (neurite growth-promoting factor 2)##NM_001012334|MDK|4192|midkine (neurite growth-promoting factor 2)	1.133911	CTCF.p2:0:0.992
chr1	214996676	214996766	reg1023508.p1	5.246	+	TSC_hg19_v1_chr1_+_214776585 U30872	-220103	+	TSC_hg19_v1_chr1_+_214776547 NM_016343 U19769 AK307690	-220200	+	TSC_hg19_v1_chr1_-_214724977 NM_005401	-271723	-	NM_001017424	182163	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	259889	+	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	744142	+	U30872|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##NM_016343|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##U19769|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##AK307690|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##NM_005401|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3	0.869245	CTCF.p2:-12:0.869
chr15	82578974	82579148	reg1024339.p2	5.246	+	TSC_hg19_v1_chr15_+_82555158 AL833762 NM_001008226 BC144647 AK304339	-23908	+	TSC_hg19_v1_chr15_-_82555076 NM_001040610 NM_024580	-23972	-	BC014628 TSC_hg19_v1_chr15_-_82555043 AK300348 AK056656 BX538332	-24030	-	NM_001164465	62644	-	TSC_hg19_v1_chr15_+_82647308 BC066934	68270	+	NM_198181 CR936812	143155	+	AL833762|FAM154B|283726|family with sequence similarity 154, member B##NM_001008226|FAM154B|283726|family with sequence similarity 154, member B##AK304339|FAM154B|283726|family with sequence similarity 154, member B##NM_001040610|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_024580|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BC014628|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK300348|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK056656|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BX538332|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9	0.0	
chr18	57566566	57566667	reg1027847.p1	5.246	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-201966	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	-202025	-	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	-540130	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	613	+	AK314130 NM_005912	473384	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1591158	+	NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2	0.0	
chr8	143627057	143627156	reg1027007.p1	5.246	+	AB005297 NM_001702	-81730	+	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	-142569	-	BC144560 AK125848 AK131461 NM_207414	-1109789	-	AF193421 D87468 BC075802 BC012321 NM_015193 TSC_hg19_v1_chr8_-_143695839	68720	-	TSC_hg19_v1_chr8_-_143751386 BC071862	124248	-	TSC_hg19_v1_chr8_-_143751397 AK127631 NM_001077527 NM_003724 BX640755	124295	-	AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein##AF193421|ARC|23237|activity-regulated cytoskeleton-associated protein##D87468|ARC|23237|activity-regulated cytoskeleton-associated protein##BC075802|ARC|23237|activity-regulated cytoskeleton-associated protein##BC012321|ARC|23237|activity-regulated cytoskeleton-associated protein##NM_015193|ARC|23237|activity-regulated cytoskeleton-associated protein##BC071862|JRK|8629|jerky homolog (mouse)##AK127631|JRK|8629|jerky homolog (mouse)##NM_001077527|JRK|8629|jerky homolog (mouse)##NM_003724|JRK|8629|jerky homolog (mouse)##BX640755|JRK|8629|jerky homolog (mouse)	1.061598	CTCF.p2:0:0.999
chr1	223348479	223348614	reg1028133.p1	5.245	+	TSC_hg19_v1_chr1_-_223316591 NM_003268	-31940	-	TSC_hg19_v1_chr1_+_222988422 NM_032890	-360155	+	AK125494 NM_207468	-437989	+	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	188925	-	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	218219	+	TSC_hg19_v1_chr1_-_223853364 BC157893	504824	-	NM_003268|TLR5|7100|toll-like receptor 5##NM_032890|DISP1|84976|dispatched homolog 1 (Drosophila)##AK125494|FAM177B|400823|family with sequence similarity 177, member B##NM_207468|FAM177B|400823|family with sequence similarity 177, member B##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4##NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65##BC157893|CAPN8|388743|calpain 8	0.0	
chr17	35887477	35887616	reg1027800.p1	5.245	+	TSC_hg19_v1_chr17_+_35849998 BC001894 AF038844 BC000370 BC004448	-37531	+	TSC_hg19_v1_chr17_+_35849996 AK314894	-37557	+	NM_007026 TSC_hg19_v1_chr17_+_35849956	-37586	+	TSC_hg19_v1_chr17_-_35969418 AB462949 BC117313 BC143452 BC143476 BC143478 BC084536 BC090930 AF169548 AK302821 NM_001163544 NM_001163545 NM_001163546 NM_001163547 NM_007247 NM_080550 NM_198882	81904	-	TSC_hg19_v1_chr17_-_36003446 BC006489 AB208938 CU692030	115895	-	TSC_hg19_v1_chr17_-_36003470 AF077033 AK001652 AK093661 AX748248 BC041785 NM_007010	115931	-	BC001894|DUSP14|11072|dual specificity phosphatase 14##AF038844|DUSP14|11072|dual specificity phosphatase 14##BC000370|DUSP14|11072|dual specificity phosphatase 14##BC004448|DUSP14|11072|dual specificity phosphatase 14##AK314894|DUSP14|11072|dual specificity phosphatase 14##NM_007026|DUSP14|11072|dual specificity phosphatase 14##BC117313|SYNRG|11276|synergin, gamma##BC143452|SYNRG|11276|synergin, gamma##BC143476|SYNRG|11276|synergin, gamma##BC143478|SYNRG|11276|synergin, gamma##BC084536|SYNRG|11276|synergin, gamma##BC090930|SYNRG|11276|synergin, gamma##AF169548|SYNRG|11276|synergin, gamma##AK302821|SYNRG|11276|synergin, gamma##NM_001163544|SYNRG|11276|synergin, gamma##NM_001163545|SYNRG|11276|synergin, gamma##NM_001163546|SYNRG|11276|synergin, gamma##NM_001163547|SYNRG|11276|synergin, gamma##NM_007247|SYNRG|11276|synergin, gamma##NM_080550|SYNRG|11276|synergin, gamma##NM_198882|SYNRG|11276|synergin, gamma##BC006489|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AB208938|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AF077033|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK001652|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK093661|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC041785|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_007010|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	0.128949	
chr7	112655163	112655337	reg1027421.p1	5.245	+	AL834437 AK299901 TSC_hg19_v1_chr7_-_112579931 BC114615 AK056380 NM_152556	-75420	-	AK293311 TSC_hg19_v1_chr7_-_112430447 AK314460 AL136626 AK025482 NM_022484	-224807	-	NM_001134468 BC031976 AK096894 NM_182597	-534264	+	AK297464 AK312587 NM_001146266 AL161959 NM_001146267 TSC_hg19_v1_chr7_-_112726667	71245	-	BC030577 TSC_hg19_v1_chr7_-_112727780	72530	-	TSC_hg19_v1_chr7_-_112727812 AK309392 AF250237 AK302769	72557	-	AL834437|C7orf60|154743|chromosome 7 open reading frame 60##AK299901|C7orf60|154743|chromosome 7 open reading frame 60##BC114615|C7orf60|154743|chromosome 7 open reading frame 60##AK056380|C7orf60|154743|chromosome 7 open reading frame 60##NM_152556|C7orf60|154743|chromosome 7 open reading frame 60##AK293311|TMEM168|64418|transmembrane protein 168##AK314460|TMEM168|64418|transmembrane protein 168##AL136626|TMEM168|64418|transmembrane protein 168##AK025482|TMEM168|64418|transmembrane protein 168##NM_022484|TMEM168|64418|transmembrane protein 168##NM_001134468|C7orf53|286006|chromosome 7 open reading frame 53##BC031976|C7orf53|286006|chromosome 7 open reading frame 53##AK096894|C7orf53|286006|chromosome 7 open reading frame 53##NM_182597|C7orf53|286006|chromosome 7 open reading frame 53##AK297464|GPR85|54329|G protein-coupled receptor 85##AK312587|GPR85|54329|G protein-coupled receptor 85##NM_001146266|GPR85|54329|G protein-coupled receptor 85##AL161959|GPR85|54329|G protein-coupled receptor 85##NM_001146267|GPR85|54329|G protein-coupled receptor 85##BC030577|GPR85|54329|G protein-coupled receptor 85##AK309392|GPR85|54329|G protein-coupled receptor 85##AF250237|GPR85|54329|G protein-coupled receptor 85##AK302769|GPR85|54329|G protein-coupled receptor 85	0.9807	CTCF.p2:17:0.981
chr13	25180115	25180289	reg1027147.p2	5.244	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	-93291	-	BC040438 NM_178540 AY358145	-296485	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	-335304	+	AK292968 NM_001185085 NM_001676	74346	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	158117	+	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	316767	-	BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13##AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J	0.904898	CTCF.p2:-46:0.905
chr1	51510646	51510747	reg1027762.p1	5.244	+	TSC_hg19_v1_chr1_+_51435925 U17074 CU674290 AB587581 CR450289 DQ891516 DQ894707	-74721	+	NM_078626	-75055	+	TSC_hg19_v1_chr1_+_51434477 AK021794 BC017036	-76218	+	AK130995 NM_001136508	57206	+	TSC_hg19_v1_chr1_+_51701939 AK293047	191231	+	TSC_hg19_v1_chr1_+_51701944 NM_014372	191253	+	U17074|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##CR450289|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##DQ891516|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##DQ894707|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##NM_078626|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##AK021794|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##BC017036|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##AK130995|C1orf185|284546|chromosome 1 open reading frame 185##NM_001136508|C1orf185|284546|chromosome 1 open reading frame 185##AK293047|RNF11|26994|ring finger protein 11##NM_014372|RNF11|26994|ring finger protein 11	0.973017	CTCF.p2:12:0.973
chr20	52211255	52211435	reg1027823.p2	5.244	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-546	-	AF041259 NM_006526	-11710	-	AK302570 NM_001193421	-409524	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	475717	-	AK315220 NM_003657	475958	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	579175	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr3	15857333	15857480	reg1023980.p1	5.244	+	TSC_hg19_v1_chr3_-_15839678 AK293770 NM_001195098	-17724	-	AY367056 NM_001195099 BC035170 BC048975	-59329	-	TSC_hg19_v1_chr3_+_15643452 AK301838	-213943	+	AB002377 NM_015199 TSC_hg19_v1_chr3_-_15901096	43606	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	358788	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	448983	-	AK293770|ANKRD28|23243|ankyrin repeat domain 28##NM_001195098|ANKRD28|23243|ankyrin repeat domain 28##AY367056|ANKRD28|23243|ankyrin repeat domain 28##NM_001195099|ANKRD28|23243|ankyrin repeat domain 28##BC035170|ANKRD28|23243|ankyrin repeat domain 28##BC048975|ANKRD28|23243|ankyrin repeat domain 28##AK301838|BTD|686|biotinidase##AB002377|ANKRD28|23243|ankyrin repeat domain 28##NM_015199|ANKRD28|23243|ankyrin repeat domain 28##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)	0.536607	CTCF.p2:-11:0.459
chr4	122658011	122658115	reg1024502.p1	5.244	+	TSC_hg19_v1_chr4_-_122618148 J03745 AK312644 NM_001154	-39907	-	TSC_hg19_v1_chr4_-_122618136 AK297909 M19384 BC018671 BC032093	-39930	-	BC012804 BC012822 TSC_hg19_v1_chr4_-_122618109 BC004993 X12454 D00172 M21731	-39951	-	BC059365 TSC_hg19_v1_chr4_-_122686341 BC047657 NM_152399 AK310583	28292	-	NM_001034194 NM_005033 TSC_hg19_v1_chr4_+_122722477 AK301967 AJ505989 AJ517294 BC142978 AK307548 BC012371 BC140038 BC140039	64460	+	CR407692 TSC_hg19_v1_chr4_-_122744913 BC104783 BC104787 X51688	86788	-	J03745|ANXA5|308|annexin A5##AK312644|ANXA5|308|annexin A5##NM_001154|ANXA5|308|annexin A5##AK297909|ANXA5|308|annexin A5##M19384|ANXA5|308|annexin A5##BC018671|ANXA5|308|annexin A5##BC032093|ANXA5|308|annexin A5##BC012804|ANXA5|308|annexin A5##BC012822|ANXA5|308|annexin A5##BC004993|ANXA5|308|annexin A5##X12454|ANXA5|308|annexin A5##D00172|ANXA5|308|annexin A5##M21731|ANXA5|308|annexin A5##BC059365|TMEM155|132332|transmembrane protein 155##BC047657|TMEM155|132332|transmembrane protein 155##NM_152399|TMEM155|132332|transmembrane protein 155##AK310583|TMEM155|132332|transmembrane protein 155##NM_001034194|EXOSC9|5393|exosome component 9##NM_005033|EXOSC9|5393|exosome component 9##AK301967|EXOSC9|5393|exosome component 9##AJ505989|EXOSC9|5393|exosome component 9##AJ517294|EXOSC9|5393|exosome component 9##BC142978|EXOSC9|5393|exosome component 9##AK307548|EXOSC9|5393|exosome component 9##BC012371|EXOSC9|5393|exosome component 9##BC140038|EXOSC9|5393|exosome component 9##BC140039|EXOSC9|5393|exosome component 9##CR407692|CCNA2|890|cyclin A2##BC104783|CCNA2|890|cyclin A2##BC104787|CCNA2|890|cyclin A2##X51688|CCNA2|890|cyclin A2	0.994486	CTCF.p2:21:0.994
chr5	4942542	4942658	reg1028630.p1	5.244	+	AY335938 NM_024337	-1346433	+	AY249325 NM_178569 BC101608 BC101634 BC143638 BC143639 BC143640 BC171731	-2190299	+	AB188492 NM_001134222 NM_033267 BC065189	-2190829	-	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	197911	+	TSC_hg19_v1_chr5_+_5422777 AK126937	480175	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	480309	+	AY335938|IRX1|79192|iroquois homeobox 1##NM_024337|IRX1|79192|iroquois homeobox 1##AY249325|C5orf38|153571|chromosome 5 open reading frame 38##NM_178569|C5orf38|153571|chromosome 5 open reading frame 38##BC101608|C5orf38|153571|chromosome 5 open reading frame 38##BC101634|C5orf38|153571|chromosome 5 open reading frame 38##BC143638|C5orf38|153571|chromosome 5 open reading frame 38##BC143639|C5orf38|153571|chromosome 5 open reading frame 38##BC143640|C5orf38|153571|chromosome 5 open reading frame 38##BC171731|C5orf38|153571|chromosome 5 open reading frame 38##AB188492|IRX2|153572|iroquois homeobox 2##NM_001134222|IRX2|153572|iroquois homeobox 2##NM_033267|IRX2|153572|iroquois homeobox 2##BC065189|IRX2|153572|iroquois homeobox 2##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947	0.962591	CTCF.p2:-17:0.963
chr7	76116007	76116187	reg1021343.p1	5.244	+	AY225124 AY225125 CU679151 DQ893264 DQ896593 NM_001102596	-6271	+	NM_001102594 NM_001102595 NM_020892 BC018555 DQ010329 AK293226 TSC_hg19_v1_chr7_+_76091025 AK023924 AB040961 BC008856 BC026059 BC093079	-25070	+	X56777 M60504 NM_001110354	-61836	+	NM_030570 NM_182684 AK290096 AY233462 BC004304 AK056760 CU678662	23759	+	TSC_hg19_v1_chr7_+_76178647 BC090058	62535	+	TSC_hg19_v1_chr7_+_76178675 BC078169	62578	+	AY225124|DTX2|113878|deltex homolog 2 (Drosophila)##AY225125|DTX2|113878|deltex homolog 2 (Drosophila)##DQ893264|DTX2|113878|deltex homolog 2 (Drosophila)##DQ896593|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102596|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102594|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102595|DTX2|113878|deltex homolog 2 (Drosophila)##NM_020892|DTX2|113878|deltex homolog 2 (Drosophila)##BC018555|DTX2|113878|deltex homolog 2 (Drosophila)##DQ010329|DTX2|113878|deltex homolog 2 (Drosophila)##AK293226|DTX2|113878|deltex homolog 2 (Drosophila)##AK023924|DTX2|113878|deltex homolog 2 (Drosophila)##AB040961|DTX2|113878|deltex homolog 2 (Drosophila)##BC008856|DTX2|113878|deltex homolog 2 (Drosophila)##BC026059|DTX2|113878|deltex homolog 2 (Drosophila)##BC093079|DTX2|113878|deltex homolog 2 (Drosophila)##X56777|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##M60504|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_001110354|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_030570|UPK3B|80761|uroplakin 3B##NM_182684|UPK3B|80761|uroplakin 3B##AK290096|UPK3B|80761|uroplakin 3B##AY233462|UPK3B|80761|uroplakin 3B##BC004304|UPK3B|80761|uroplakin 3B##AK056760|UPK3B|80761|uroplakin 3B##BC090058|LOC100133091|100133091|uncharacterized LOC100133091##BC078169|LOC100133091|100133091|uncharacterized LOC100133091	0.0	
chr10	103296708	103296817	reg1026575.p1	5.243	+	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	-182890	+	BC136321 BC069156 NM_006562 X90828	-308060	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-405584	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	51167	-	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	51247	-	TSC_hg19_v1_chr10_+_103348081 BC031695 BC001082 NM_015448 AK290154 AB527777 EU832466 EU832547 AY532267	51308	+	NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda##BC031695|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##BC001082|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##NM_015448|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AK290154|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832466|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832547|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AY532267|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)	0.971369	CTCF.p2:-2:0.971
chr17	71581817	71581916	reg1024102.p1	5.243	+	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-273726	-	BC157870 NM_001129885	-323848	-	BC005005 TSC_hg19_v1_chr17_+_71229423	-352476	+	NM_001144952	58360	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	617949	+	TSC_hg19_v1_chr17_+_72199849 BC000603	617987	+	BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##BC005005|C17orf80|55028|chromosome 17 open reading frame 80##NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38	0.676644	CTCF.p2:21:0.677
chr6	137881040	137881124	reg1024900.p1	5.243	+	BC051352 AK096362 NM_175747	-65557	-	TSC_hg19_v1_chr6_-_137540556 NM_000416	-340524	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-340537	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	307455	+	TSC_hg19_v1_chr6_-_138189314 AK124173	308268	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	547486	-	BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector	0.869245	CTCF.p2:6:0.869
chr8	19616182	19616297	reg1020705.p2	5.243	+	AK314625 TSC_hg19_v1_chr8_-_19615422	-822	-	AY358441 NM_018371	-76146	-	BX649103 NM_001130518	-156209	-	TSC_hg19_v1_chr8_+_19674936 NM_018142	58682	+	TSC_hg19_v1_chr8_+_19674972 AK001431 AB590485	58764	+	NM_000237 S78266 TSC_hg19_v1_chr8_+_19796721	180413	+	AK314625|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AY358441|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018371|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##BX649103|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_001130518|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018142|INTS10|55174|integrator complex subunit 10##AK001431|INTS10|55174|integrator complex subunit 10##NM_000237|LPL|4023|lipoprotein lipase##S78266|LPL|4023|lipoprotein lipase	0.061968	
chr10	18026487	18026601	reg1025731.p1	5.242	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	-175141	+	NM_001098844 BC157856	-232290	+	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	-340314	+	NM_001098844 BC157856	14677	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	71849	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	214285	+	BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	0.976734	CTCF.p2:-6:0.977
chr11	108659427	108659518	reg1024921.p1	5.242	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-123658	+	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	-195068	-	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	-290277	-	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	633371	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	633427	+	AK095101 TSC_hg19_v1_chr11_+_109963524	1304056	+	AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5##AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C	0.265151	CTCF.p2:1:0.265
chr1	155931899	155932033	reg1028129.p2	5.242	+	NM_181885 BC101507 BC101509 AY170824 AY288415 AY394502 EU432129	-20477	+	TSC_hg19_v1_chr1_-_155904201 AK225714	-27764	-	BC027182 TSC_hg19_v1_chr1_-_155904193 AB020714	-27776	-	TSC_hg19_v1_chr1_-_155939059 AM393305 BT007407 CU676564 DQ891489 DQ894678	7095	-	TSC_hg19_v1_chr1_-_155947967 AL512715 NM_004723	15979	-	TSC_hg19_v1_chr1_-_155948245 AF486838	16260	-	NM_181885|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##BC101507|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##BC101509|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY170824|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY288415|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY394502|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##EU432129|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AK225714|KIAA0907|22889|KIAA0907##BC027182|KIAA0907|22889|KIAA0907##AB020714|KIAA0907|22889|KIAA0907##AM393305|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##BT007407|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##DQ891489|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##DQ894678|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AL512715|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##NM_004723|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AF486838|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2	0.030867	
chr1	221967729	221967910	reg1022240.p3	5.242	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-52333	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-52389	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-52411	-	AY358602 BC007638 BC016552 NM_024746	753615	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	795358	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	823581	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.0	
chr14	55360006	55360125	reg1026228.p1	5.242	+	NM_001161577 BC021726	-138538	+	TSC_hg19_v1_chr14_+_55168831 AB028976	-191176	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	-325429	+	AY137463 AY137464 AY137465 Z16418 S44049 CR536551 DQ892998 DQ896245 S43856 S44053 TSC_hg19_v1_chr14_-_55369545 Z29433 Z29434 U66095 BC025415 U19523 U66097 NM_000161 NM_001024024 NM_001024070 NM_001024071	9349	-	TSC_hg19_v1_chr14_-_55493780 BC000622 BC005040 AK293005 BC063041	133720	-	TSC_hg19_v1_chr14_-_55493818 BC043349 NM_001008396 NM_007086	133746	-	NM_001161577|SAMD4A|23034|sterile alpha motif domain containing 4A##BC021726|SAMD4A|23034|sterile alpha motif domain containing 4A##AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A##AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##AY137463|GCH1|2643|GTP cyclohydrolase 1##AY137464|GCH1|2643|GTP cyclohydrolase 1##AY137465|GCH1|2643|GTP cyclohydrolase 1##Z16418|GCH1|2643|GTP cyclohydrolase 1##S44049|GCH1|2643|GTP cyclohydrolase 1##CR536551|GCH1|2643|GTP cyclohydrolase 1##DQ892998|GCH1|2643|GTP cyclohydrolase 1##DQ896245|GCH1|2643|GTP cyclohydrolase 1##S43856|GCH1|2643|GTP cyclohydrolase 1##S44053|GCH1|2643|GTP cyclohydrolase 1##Z29433|GCH1|2643|GTP cyclohydrolase 1##Z29434|GCH1|2643|GTP cyclohydrolase 1##U66095|GCH1|2643|GTP cyclohydrolase 1##BC025415|GCH1|2643|GTP cyclohydrolase 1##U19523|GCH1|2643|GTP cyclohydrolase 1##U66097|GCH1|2643|GTP cyclohydrolase 1##NM_000161|GCH1|2643|GTP cyclohydrolase 1##NM_001024024|GCH1|2643|GTP cyclohydrolase 1##NM_001024070|GCH1|2643|GTP cyclohydrolase 1##NM_001024071|GCH1|2643|GTP cyclohydrolase 1##BC000622|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC005040|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##AK293005|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC063041|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC043349|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_001008396|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_007086|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1	0.475599	CTCF.p2:-1:0.476
chr2	102674105	102674285	reg1024171.p2	5.242	+	BC027733 BC012346 NM_173343	-58738	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	-65832	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	-165663	+	TSC_hg19_v1_chr2_+_102759205 X16896	85037	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	96225	+	AF284434 NM_003854 U49065 BC107064	129253	+	BC027733|IL1R2|7850|interleukin 1 receptor, type II##BC012346|IL1R2|7850|interleukin 1 receptor, type II##NM_173343|IL1R2|7850|interleukin 1 receptor, type II##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##X16896|IL1R1|3554|interleukin 1 receptor, type I##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2	0.0	
chr2	63250679	63250847	reg1025510.p1	5.242	+	BC029477 NM_001142614	-316733	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	-317797	+	AK292545 NM_001142615	-349778	+	NM_001199770	26428	+	NM_014562 TSC_hg19_v1_chr2_+_63277964 AK095680 AK297308 BC007621	27202	+	TSC_hg19_v1_chr2_-_63815560 AK310290	564777	-	BC029477|EHBP1|23301|EH domain binding protein 1##NM_001142614|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##NM_001199770|OTX1|5013|orthodenticle homeobox 1##NM_014562|OTX1|5013|orthodenticle homeobox 1##AK095680|OTX1|5013|orthodenticle homeobox 1##AK297308|OTX1|5013|orthodenticle homeobox 1##BC007621|OTX1|5013|orthodenticle homeobox 1##AK310290|WDPCP|51057|WD repeat containing planar cell polarity effector	0.713308	CTCF.p2:25:0.713
chr6	12011279	12011432	reg1024251.p2	5.242	+	NM_001143948 NM_032744	-232076	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-472857	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-628815	-	NM_002114	1368	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	279238	+	TSC_hg19_v1_chr6_+_12514301 D28417	502947	+	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr8	95654669	95654774	reg1024332.p2	5.242	+	TSC_hg19_v1_chr8_+_95653401 BC099916 BC067098 BC019932 BC052574	-1277	+	TSC_hg19_v1_chr8_+_95653392 NM_001034915 NM_001122825 NM_001122826 NM_001122827 NM_017697	-1355	+	TSC_hg19_v1_chr8_+_95653284 BX647570	-1429	+	TSC_hg19_v1_chr8_+_95732105 NM_181787 AK123682 BX538174 BX538048 BC110870	77419	+	TSC_hg19_v1_chr8_+_95732206 BC126193 BC130576	77489	+	TSC_hg19_v1_chr8_+_95835522 BC099915 AB161944 NM_017864	180827	+	BC099916|ESRP1|54845|epithelial splicing regulatory protein 1##BC067098|ESRP1|54845|epithelial splicing regulatory protein 1##BC019932|ESRP1|54845|epithelial splicing regulatory protein 1##BC052574|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001034915|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122825|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122826|ESRP1|54845|epithelial splicing regulatory protein 1##NM_001122827|ESRP1|54845|epithelial splicing regulatory protein 1##NM_017697|ESRP1|54845|epithelial splicing regulatory protein 1##BX647570|ESRP1|54845|epithelial splicing regulatory protein 1##NM_181787|DPY19L4|286148|dpy-19-like 4 (C. elegans)##AK123682|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BX538174|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BX538048|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC110870|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC126193|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC130576|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC099915|INTS8|55656|integrator complex subunit 8##AB161944|INTS8|55656|integrator complex subunit 8##NM_017864|INTS8|55656|integrator complex subunit 8	0.07545	
chr1	1731300	1731415	reg1027469.p1	5.241	+	TSC_hg19_v1_chr1_-_1711471 AF250320 NM_001198994	-19877	-	BC001709 TSC_hg19_v1_chr1_-_1710295 AK291599 NM_001198993	-21088	-	TSC_hg19_v1_chr1_-_1709864 AK291728 AK290161 AK023114 NM_023018	-21471	-	TSC_hg19_v1_chr1_-_1822437 BC004186 X04526 AK295607 BC140714 BC171773	91095	-	TSC_hg19_v1_chr1_-_1822496 BC008991	91138	-	AK312614 TSC_hg19_v1_chr1_-_1822502	91145	-	AF250320|NADK|65220|NAD kinase##NM_001198994|NADK|65220|NAD kinase##BC001709|NADK|65220|NAD kinase##AK291599|NADK|65220|NAD kinase##NM_001198993|NADK|65220|NAD kinase##AK291728|NADK|65220|NAD kinase##AK290161|NADK|65220|NAD kinase##AK023114|NADK|65220|NAD kinase##NM_023018|NADK|65220|NAD kinase##BC004186|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##X04526|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##BC140714|CDK11B|984|cyclin-dependent kinase 11B##BC171773|CDK11B|984|cyclin-dependent kinase 11B##BC008991|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##AK312614|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1	0.0	
chr12	110887577	110887710	reg1015804.p1	5.241	+	TSC_hg19_v1_chr12_-_110841526 BC141848 AK021809 NM_001137664 NM_016238	-46132	-	TSC_hg19_v1_chr12_-_110841470 BC098264 BC098295 BC098362 BC099732 BC111798 AF191340 BC148236 BC040130	-46204	-	TSC_hg19_v1_chr12_+_110719528 M23114 BC035588 M23115 CU690124	-168275	+	TSC_hg19_v1_chr12_-_110888079 AF006086	442	-	BC078162 TSC_hg19_v1_chr12_-_110888104	458	-	TSC_hg19_v1_chr12_-_110888123 BC067747 AL357196	475	-	BC141848|ANAPC7|51434|anaphase promoting complex subunit 7##AK021809|ANAPC7|51434|anaphase promoting complex subunit 7##NM_001137664|ANAPC7|51434|anaphase promoting complex subunit 7##NM_016238|ANAPC7|51434|anaphase promoting complex subunit 7##BC098264|ANAPC7|51434|anaphase promoting complex subunit 7##BC098295|ANAPC7|51434|anaphase promoting complex subunit 7##BC098362|ANAPC7|51434|anaphase promoting complex subunit 7##BC099732|ANAPC7|51434|anaphase promoting complex subunit 7##BC111798|ANAPC7|51434|anaphase promoting complex subunit 7##AF191340|ANAPC7|51434|anaphase promoting complex subunit 7##BC148236|ANAPC7|51434|anaphase promoting complex subunit 7##BC040130|ANAPC7|51434|anaphase promoting complex subunit 7##M23114|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC035588|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23115|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##AF006086|ARPC3|10094|actin related protein 2/3 complex, subunit 3, 21kDa##BC078162|ARPC3|10094|actin related protein 2/3 complex, subunit 3, 21kDa##BC067747|ARPC3|10094|actin related protein 2/3 complex, subunit 3, 21kDa	0.202318	CTCF.p2:9:0.202
chr15	100106064	100106244	reg1020788.p2	5.241	+	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	-1	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-314512	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-314738	-	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	40	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	81	+	NM_001130928 BC053871 CU680614 AB384809 AM392739 AM393856 EU446488 CU691046	67115	+	NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A##NM_001130928|MEF2A|4205|myocyte enhancer factor 2A##BC053871|MEF2A|4205|myocyte enhancer factor 2A##AM392739|MEF2A|4205|myocyte enhancer factor 2A##AM393856|MEF2A|4205|myocyte enhancer factor 2A##EU446488|MEF2A|4205|myocyte enhancer factor 2A	0.0	
chr2	38123573	38123741	reg1027252.p1	5.241	+	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	-224268	-	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	-224878	-	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-551844	+	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	28775	+	BC024243 NM_001170792	32244	+	NM_001170793 NM_144713 AK057516 AF435956	53943	+	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1##BC024243|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1	0.978902	CTCF.p2:6:0.979
chr13	52158610	52158790	reg1019767.p3	5.240	+	TSC_hg19_v1_chr13_+_52158639 BC014004	-59	+	AK309815 TSC_hg19_v1_chr13_+_52158630	-67	+	TSC_hg19_v1_chr13_+_52158597 AK311177	-106	+	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	35	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	219575	-	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	277494	+	BC014004|WDFY2|115825|WD repeat and FYVE domain containing 2##AK309815|WDFY2|115825|WD repeat and FYVE domain containing 2##AK311177|WDFY2|115825|WD repeat and FYVE domain containing 2##AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70	0.0	
chr17	49717554	49717659	reg1024529.p1	5.240	+	AF151806 TSC_hg19_v1_chr17_+_49337913 AK314399 BC025276 BC001535	-379681	+	TSC_hg19_v1_chr17_+_49337906 NM_016001	-379707	+	TSC_hg19_v1_chr17_+_49337888 AK026355	-379720	+	TSC_hg19_v1_chr17_-_50235676 AK294652 AK313001	518082	-	TSC_hg19_v1_chr17_-_50236075 BC047456 BC068462	518434	-	CR936674 TSC_hg19_v1_chr17_-_50236127 NM_020178	518532	-	AF151806|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK314399|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC025276|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC001535|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##NM_016001|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK026355|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK294652|CA10|56934|carbonic anhydrase X##AK313001|CA10|56934|carbonic anhydrase X##BC047456|CA10|56934|carbonic anhydrase X##BC068462|CA10|56934|carbonic anhydrase X##NM_020178|CA10|56934|carbonic anhydrase X	0.185275	
chr19	56582573	56582711	reg1022584.p1	5.240	+	AB527195 AY054986 AY154460 NM_153447	-71552	+	NM_176811 AB527377 AY154463	-123410	+	AB527194 AY154468 NM_176810	-138954	-	TSC_hg19_v1_chr19_-_56632629 BC037737	49972	-	TSC_hg19_v1_chr19_-_56632646 BC012495 BC077728 NM_001002836	50004	-	TSC_hg19_v1_chr19_+_56652664 NM_001253792 NM_018337 AL834130 AK223408	69963	+	AY054986|NLRP5|126206|NLR family, pyrin domain containing 5##AY154460|NLRP5|126206|NLR family, pyrin domain containing 5##NM_153447|NLRP5|126206|NLR family, pyrin domain containing 5##NM_176811|NLRP8|126205|NLR family, pyrin domain containing 8##AY154463|NLRP8|126205|NLR family, pyrin domain containing 8##AY154468|NLRP13|126204|NLR family, pyrin domain containing 13##NM_176810|NLRP13|126204|NLR family, pyrin domain containing 13##BC037737|ZNF787|126208|zinc finger protein 787##BC012495|ZNF787|126208|zinc finger protein 787##BC077728|ZNF787|126208|zinc finger protein 787##NM_001002836|ZNF787|126208|zinc finger protein 787##NM_001253792|ZNF444|55311|zinc finger protein 444##NM_018337|ZNF444|55311|zinc finger protein 444##AL834130|ZNF444|55311|zinc finger protein 444##AK223408|ZNF444|55311|zinc finger protein 444	0.981942	CTCF.p2:8:0.982
chr2	176068491	176068607	reg1024711.p1	5.240	+	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	-22245	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	-35654	-	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	-198536	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	798426	-	NM_001080458	880140	-	TSC_hg19_v1_chr2_+_176957451 NM_000523 AB463753	888995	+	CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715##NM_001080458|EVX2|344191|even-skipped homeobox 2##NM_000523|HOXD13|3239|homeobox D13	0.883885	CTCF.p2:0:0.884
chr4	2801962	2802115	reg1026094.p3	5.240	+	AK312286 TSC_hg19_v1_chr4_+_2794811 AK307106	-7216	+	TSC_hg19_v1_chr4_+_2794755 AK225497 NM_001122681 BC022996	-7303	+	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	-43975	-	NM_001145855 TSC_hg19_v1_chr4_+_2813962	11916	+	TSC_hg19_v1_chr4_+_2813973 AK299996 AK304752	11967	+	TSC_hg19_v1_chr4_+_2819914 NM_001145856 U56386	17875	+	AK312286|SH3BP2|6452|SH3-domain binding protein 2##AK307106|SH3BP2|6452|SH3-domain binding protein 2##AK225497|SH3BP2|6452|SH3-domain binding protein 2##NM_001122681|SH3BP2|6452|SH3-domain binding protein 2##BC022996|SH3BP2|6452|SH3-domain binding protein 2##AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001145855|SH3BP2|6452|SH3-domain binding protein 2##AK299996|SH3BP2|6452|SH3-domain binding protein 2##AK304752|SH3BP2|6452|SH3-domain binding protein 2##NM_001145856|SH3BP2|6452|SH3-domain binding protein 2##U56386|SH3BP2|6452|SH3-domain binding protein 2	0.0	
chr6	151134661	151134841	reg1026605.p1	5.240	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	-213731	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	-444593	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-670510	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	52081	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	52170	+	TSC_hg19_v1_chr6_+_151187064 AL117452	52350	+	NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AL117452|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.0	
chr8	22722973	22723049	reg1012162.p2	5.240	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-172227	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-172506	-	AK294968 AK295834 NM_001199881	-172937	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	62313	-	AK092617 BC034917 NM_001160036	121912	+	NM_001160037	130349	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.045685	
chr9	138494664	138494771	reg1024898.p1	5.240	+	AK311730 AK304657 AK309965 AK309983 AK311007 AK311731 AK311813 J04129 NM_001018049 NM_002571 M61886 AL050169 BC069451 BC069562 AB528962 HQ258098 CU686906 BC112304 BC113728 DQ884407	-41094	+	AJ251021 AJ251022 AJ251023 AJ251024 NM_014582 BC143803 BC069563 AM087898	-56691	+	M90424 NM_001252617 NM_001252618 NM_001252619 NM_002297 BC065721 X67647 BC074925 BC074926 X62418	-81411	+	AY336054 NM_182974	36668	-	AB463839 AY301270 NM_001001676	60450	+	AY884306 AY902244 BC031861 NM_001012415 NM_001101677	96628	-	AK311730|PAEP|5047|progestagen-associated endometrial protein##AK304657|PAEP|5047|progestagen-associated endometrial protein##AK309983|PAEP|5047|progestagen-associated endometrial protein##AK311007|PAEP|5047|progestagen-associated endometrial protein##AK311813|PAEP|5047|progestagen-associated endometrial protein##J04129|PAEP|5047|progestagen-associated endometrial protein##NM_001018049|PAEP|5047|progestagen-associated endometrial protein##NM_002571|PAEP|5047|progestagen-associated endometrial protein##M61886|PAEP|5047|progestagen-associated endometrial protein##BC069451|PAEP|5047|progestagen-associated endometrial protein##BC069562|PAEP|5047|progestagen-associated endometrial protein##HQ258098|PAEP|5047|progestagen-associated endometrial protein##BC112304|PAEP|5047|progestagen-associated endometrial protein##BC113728|PAEP|5047|progestagen-associated endometrial protein##DQ884407|PAEP|5047|progestagen-associated endometrial protein##AJ251021|OBP2A|29991|odorant binding protein 2A##AJ251022|OBP2A|29991|odorant binding protein 2A##AJ251023|OBP2A|29991|odorant binding protein 2A##AJ251024|OBP2A|29991|odorant binding protein 2A##NM_014582|OBP2A|29991|odorant binding protein 2A##BC069563|OBP2A|29991|odorant binding protein 2A##AM087898|OBP2A|29991|odorant binding protein 2A##M90424|LCN1|3933|lipocalin 1##NM_001252617|LCN1|3933|lipocalin 1##NM_001252618|LCN1|3933|lipocalin 1##NM_001252619|LCN1|3933|lipocalin 1##NM_002297|LCN1|3933|lipocalin 1##BC065721|LCN1|3933|lipocalin 1##X67647|LCN1|3933|lipocalin 1##BC074925|LCN1|3933|lipocalin 1##BC074926|LCN1|3933|lipocalin 1##X62418|LCN1|3933|lipocalin 1##AY336054|GLT6D1|360203|glycosyltransferase 6 domain containing 1##NM_182974|GLT6D1|360203|glycosyltransferase 6 domain containing 1##AY301270|LCN9|392399|lipocalin 9##NM_001001676|LCN9|392399|lipocalin 9##AY884306|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##AY902244|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##BC031861|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##NM_001012415|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##NM_001101677|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1	0.965373	CTCF.p2:-1:0.965
chr11	86343906	86344061	reg1026466.p1	5.239	+	AK131331 NM_001156474 NM_021827	-258206	+	NM_016401 TSC_hg19_v1_chr11_+_86013281 AF161487 AF161527 AK001447 AK223198 BC015991 BC021621 AK298763 BC018080 BC001677 BC006476 DQ892731 DQ895977 CU674828 CU676162	-330614	+	TSC_hg19_v1_chr11_+_85956277 BC068995 AK294133 CU686693 AB463023 EU446743 AF078933 AK301265 BC047672	-387697	+	TSC_hg19_v1_chr11_-_86383218 BC022472 NM_001014811 AK092181	39222	-	X79440 TSC_hg19_v1_chr11_-_86383470 NM_006680 AK313695	39459	-	TSC_hg19_v1_chr11_-_86383659 AK300974 NM_001161586	39682	-	AK131331|CCDC81|60494|coiled-coil domain containing 81##NM_001156474|CCDC81|60494|coiled-coil domain containing 81##NM_021827|CCDC81|60494|coiled-coil domain containing 81##NM_016401|C11orf73|51501|chromosome 11 open reading frame 73##AF161487|C11orf73|51501|chromosome 11 open reading frame 73##AF161527|C11orf73|51501|chromosome 11 open reading frame 73##AK001447|C11orf73|51501|chromosome 11 open reading frame 73##AK223198|C11orf73|51501|chromosome 11 open reading frame 73##BC015991|C11orf73|51501|chromosome 11 open reading frame 73##BC021621|C11orf73|51501|chromosome 11 open reading frame 73##AK298763|C11orf73|51501|chromosome 11 open reading frame 73##BC018080|C11orf73|51501|chromosome 11 open reading frame 73##BC001677|C11orf73|51501|chromosome 11 open reading frame 73##BC006476|C11orf73|51501|chromosome 11 open reading frame 73##DQ892731|C11orf73|51501|chromosome 11 open reading frame 73##DQ895977|C11orf73|51501|chromosome 11 open reading frame 73##BC068995|EED|8726|embryonic ectoderm development##AK294133|EED|8726|embryonic ectoderm development##EU446743|EED|8726|embryonic ectoderm development##AF078933|EED|8726|embryonic ectoderm development##AK301265|EED|8726|embryonic ectoderm development##BC047672|EED|8726|embryonic ectoderm development##BC022472|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001014811|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK092181|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##X79440|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_006680|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK313695|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK300974|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001161586|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial	0.0	
chr13	70509279	70509393	reg1022716.p1	5.239	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-2704832	-	AK289924 NM_022843	-8519682	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-8520083	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	173205	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	1930923	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	1931427	-	BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)	0.996633	CTCF.p2:-22:0.997
chr15	38543758	38543858	reg1021307.p1	5.239	+	BC029221 NM_152453	-316352	+	TSC_hg19_v1_chr15_-_37393466 BC050431 NM_001220482 NM_002399 BC001516 BC001844 BC007202 AK300247	-1150366	-	TSC_hg19_v1_chr15_-_37392751 AK056216 NM_170674 NM_170675 NM_170676 NM_170677	-1151252	-	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	587	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	1214	+	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	202537	+	BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##BC050431|MEIS2|4212|Meis homeobox 2##NM_001220482|MEIS2|4212|Meis homeobox 2##NM_002399|MEIS2|4212|Meis homeobox 2##BC001516|MEIS2|4212|Meis homeobox 2##BC001844|MEIS2|4212|Meis homeobox 2##BC007202|MEIS2|4212|Meis homeobox 2##AK300247|MEIS2|4212|Meis homeobox 2##AK056216|MEIS2|4212|Meis homeobox 2##NM_170674|MEIS2|4212|Meis homeobox 2##NM_170675|MEIS2|4212|Meis homeobox 2##NM_170676|MEIS2|4212|Meis homeobox 2##NM_170677|MEIS2|4212|Meis homeobox 2##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B	0.061179	
chr18	51749713	51749814	reg1026915.p1	5.239	+	TSC_hg19_v1_chr18_-_51690988 AL110266	-58771	-	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-1882650	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-1883222	+	AF072246 TSC_hg19_v1_chr18_-_51750614	774	-	TSC_hg19_v1_chr18_-_51750997 BC032638	1202	-	TSC_hg19_v1_chr18_-_51751035 AF072242 NM_003927 NM_015832	1314	-	AL110266|MBD2|8932|methyl-CpG binding domain protein 2##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2##AF072242|MBD2|8932|methyl-CpG binding domain protein 2##NM_003927|MBD2|8932|methyl-CpG binding domain protein 2##NM_015832|MBD2|8932|methyl-CpG binding domain protein 2	0.740427	CTCF.p2:-17:0.740
chr4	101425742	101425869	reg1027775.p1	5.239	+	AL832277 BC013592 TSC_hg19_v1_chr4_-_101111626 AK312926 AK094236 NM_145244	-314175	-	TSC_hg19_v1_chr4_+_100871641 AK123926	-554159	+	TSC_hg19_v1_chr4_-_100871513 AK056803 NM_002106 BC103743	-554291	-	CU676062 AB590686 AB034695 AK222741 AK304568 AK291831 BC017781 AF205940 AK026875 AK313504 NM_001159694 NM_016242	13355	-	AB385587 AB451338 AB451487 AM393486 AM393713 CU693026 AY904364 BC025714 TSC_hg19_v1_chr4_-_102268080 L14778	842221	-	TSC_hg19_v1_chr4_-_102268343 AL353950	842567	-	AL832277|DDIT4L|115265|DNA-damage-inducible transcript 4-like##BC013592|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK312926|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK094236|DDIT4L|115265|DNA-damage-inducible transcript 4-like##NM_145244|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK123926|LOC256880|256880|uncharacterized LOC256880##AK056803|H2AFZ|3015|H2A histone family, member Z##NM_002106|H2AFZ|3015|H2A histone family, member Z##BC103743|H2AFZ|3015|H2A histone family, member Z##AB034695|EMCN|51705|endomucin##AK222741|EMCN|51705|endomucin##AK304568|EMCN|51705|endomucin##AK291831|EMCN|51705|endomucin##BC017781|EMCN|51705|endomucin##AF205940|EMCN|51705|endomucin##AK026875|EMCN|51705|endomucin##AK313504|EMCN|51705|endomucin##NM_001159694|EMCN|51705|endomucin##NM_016242|EMCN|51705|endomucin##AB451338|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AB451487|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393486|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393713|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AY904364|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##BC025714|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##L14778|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AL353950|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	0.087661	
chr7	72649264	72649398	reg1024043.p1	5.239	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	-80300	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-224089	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-252457	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	73493	-	AK057366 AY081948 AY081949 NM_178125	92753	-	NM_001135211 AK302121 NM_003602 AK310255 BC036817 AF038847 CU691432 EU176233 EU176537 GQ129339 GQ129340	92961	+	BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50##NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa##AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa##NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa##AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa##BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa##AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa	0.0	
chr11	117009492	117009600	reg1028902.p1	5.238	+	BC128511 BC128510 NM_025164 BC121188 TSC_hg19_v1_chr11_-_116969081	-40513	-	X00566 TSC_hg19_v1_chr11_-_116708339 AX752114 AX752116 BC005380 NM_000039 AK292231 BC110286	-301191	-	TSC_hg19_v1_chr11_+_116700622 BC121081 BC134419 NM_000040 BC027977	-308922	+	TSC_hg19_v1_chr11_+_117015002 NM_001184746 NM_001184747 NM_001184748 NM_002572 AK292973 AK307366 BC000398 BC019301 BC039721 D63390 BC001774 DQ836738 DQ836739 DQ836740 DQ836741 DQ836742 DQ836743	5487	+	TSC_hg19_v1_chr11_+_117049458 AK292501	40011	+	TSC_hg19_v1_chr11_+_117049872 AF151799 BC114522 BC114959 AY358442 NM_001040455 AK292974	40346	+	BC128511|SIK3|23387|SIK family kinase 3##BC128510|SIK3|23387|SIK family kinase 3##NM_025164|SIK3|23387|SIK family kinase 3##BC121188|SIK3|23387|SIK family kinase 3##X00566|APOA1|335|apolipoprotein A-I##BC005380|APOA1|335|apolipoprotein A-I##NM_000039|APOA1|335|apolipoprotein A-I##AK292231|APOA1|335|apolipoprotein A-I##BC110286|APOA1|335|apolipoprotein A-I##BC121081|APOC3|345|apolipoprotein C-III##BC134419|APOC3|345|apolipoprotein C-III##NM_000040|APOC3|345|apolipoprotein C-III##BC027977|APOC3|345|apolipoprotein C-III##NM_001184746|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184747|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184748|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_002572|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292973|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK307366|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC000398|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC019301|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC039721|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##D63390|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC001774|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836738|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836739|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836740|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836741|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836742|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836743|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292501|SIDT2|51092|SID1 transmembrane family, member 2##AF151799|SIDT2|51092|SID1 transmembrane family, member 2##BC114522|SIDT2|51092|SID1 transmembrane family, member 2##BC114959|SIDT2|51092|SID1 transmembrane family, member 2##AY358442|SIDT2|51092|SID1 transmembrane family, member 2##NM_001040455|SIDT2|51092|SID1 transmembrane family, member 2##AK292974|SIDT2|51092|SID1 transmembrane family, member 2	0.023626	
chr20	48808883	48809063	reg1028056.p2	5.238	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	-1343	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	-1592	+	NM_005194 TSC_hg19_v1_chr20_+_48807197	-1780	+	TSC_hg19_v1_chr20_+_49126895 AK290638 NM_002827	317903	+	TSC_hg19_v1_chr20_+_49126916 AK316563	317940	+	AK299830 TSC_hg19_v1_chr20_+_49126919	317946	+	EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK290638|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##NM_002827|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK316563|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1	0.0	
chr22	22465429	22465536	reg1023265.p1	5.238	+	TSC_hg19_v1_chr22_+_22385369 AF026922	-80117	+	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	-128296	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	-128335	-	X02422 TSC_hg19_v1_chr22_+_22550141	84647	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	84696	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	103782	+	AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57	0.0	
chr4	147466400	147466509	reg1027772.p2	5.238	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	-23458	-	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	-369587	+	BC033879 TSC_hg19_v1_chr4_-_146859976	-606486	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	93637	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	400544	-	NM_001166055 NM_001957 AK315931 TSC_hg19_v1_chr4_+_148402083	935621	+	AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29##NM_001166055|EDNRA|1909|endothelin receptor type A##NM_001957|EDNRA|1909|endothelin receptor type A##AK315931|EDNRA|1909|endothelin receptor type A	0.891291	CTCF.p2:-4:0.891
chr4	16915992	16916085	reg1026588.p1	5.238	+	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	-15653	-	AK226029 TSC_hg19_v1_chr4_-_16900258	-15779	-	AK300119 AB463834 DQ891981 DQ895171 AK312881 TSC_hg19_v1_chr4_-_16900210 AF068651 AF047337 AF064492 AF064493 BC034019	-15912	-	AB528218 AM393718 DQ891926 DQ895113 CU674280 TSC_hg19_v1_chr4_-_17513714 X04882 BC000576 AK124382 AK296622 AK223437 AK289773 NM_000320	597728	-	BC127863 NM_001079827	600749	+	TSC_hg19_v1_chr4_+_17578852 NM_015907	662844	+	AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2##AK226029|LDB2|9079|LIM domain binding 2##AK300119|LDB2|9079|LIM domain binding 2##DQ891981|LDB2|9079|LIM domain binding 2##DQ895171|LDB2|9079|LIM domain binding 2##AK312881|LDB2|9079|LIM domain binding 2##AF068651|LDB2|9079|LIM domain binding 2##AF047337|LDB2|9079|LIM domain binding 2##AF064492|LDB2|9079|LIM domain binding 2##AF064493|LDB2|9079|LIM domain binding 2##BC034019|LDB2|9079|LIM domain binding 2##AM393718|QDPR|5860|quinoid dihydropteridine reductase##DQ891926|QDPR|5860|quinoid dihydropteridine reductase##DQ895113|QDPR|5860|quinoid dihydropteridine reductase##X04882|QDPR|5860|quinoid dihydropteridine reductase##BC000576|QDPR|5860|quinoid dihydropteridine reductase##AK124382|QDPR|5860|quinoid dihydropteridine reductase##AK296622|QDPR|5860|quinoid dihydropteridine reductase##AK223437|QDPR|5860|quinoid dihydropteridine reductase##AK289773|QDPR|5860|quinoid dihydropteridine reductase##NM_000320|QDPR|5860|quinoid dihydropteridine reductase##BC127863|CLRN2|645104|clarin 2##NM_001079827|CLRN2|645104|clarin 2##NM_015907|LAP3|51056|leucine aminopeptidase 3	0.248168	CTCF.p2:-11:0.248
chr4	6911056	6911185	reg1024999.p1	5.238	+	TSC_hg19_v1_chr4_+_6784518 AK124715 EF553521	-126592	+	TSC_hg19_v1_chr4_+_6784467 BC150286 D86985	-126646	+	TSC_hg19_v1_chr4_+_6784458 NM_001100590 NM_014743	-126665	+	TSC_hg19_v1_chr4_+_6911192 NM_001113361	32	+	TSC_hg19_v1_chr4_-_6911379 BC032036	285	-	TSC_hg19_v1_chr4_+_6911497 NM_020773	356	+	AK124715|KIAA0232|9778|KIAA0232##EF553521|KIAA0232|9778|KIAA0232##BC150286|KIAA0232|9778|KIAA0232##D86985|KIAA0232|9778|KIAA0232##NM_001100590|KIAA0232|9778|KIAA0232##NM_014743|KIAA0232|9778|KIAA0232##NM_001113361|TBC1D14|57533|TBC1 domain family, member 14##NM_020773|TBC1D14|57533|TBC1 domain family, member 14	0.159207	
chr5	7794580	7794692	reg1023745.p2	5.238	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	-398368	+	AK308405 NM_001171806 AK303516	-1048514	+	NM_001171805 NM_006999 AF089896 BC084567	-1079886	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	56623	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	74496	-	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	74623	+	NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase	0.0	
chr3	53703048	53703145	reg1027199.p1	5.237	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	-173985	+	TSC_hg19_v1_chr3_+_53528709 M76558	-174437	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	-321503	-	TSC_hg19_v1_chr3_-_53880427 NM_018397	177323	-	TSC_hg19_v1_chr3_+_53880576 NM_018725	177476	+	TSC_hg19_v1_chr3_+_53880594 AK307749	177499	+	NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018397|CHDH|55349|choline dehydrogenase##NM_018725|IL17RB|55540|interleukin 17 receptor B##AK307749|IL17RB|55540|interleukin 17 receptor B	0.731875	CTCF.p2:9:0.732
chr8	55973386	55973514	reg1028290.p1	5.237	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	-444798	+	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	-602934	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-925639	+	BC106028 AY534241 NM_052898	41564	+	AF286340 NM_024831	712295	+	AK308247 AK056932 NM_152417 BC020835 BC071636	712447	-	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##AF286340|TGS1|96764|trimethylguanosine synthase 1##NM_024831|TGS1|96764|trimethylguanosine synthase 1##AK308247|TMEM68|137695|transmembrane protein 68##AK056932|TMEM68|137695|transmembrane protein 68##NM_152417|TMEM68|137695|transmembrane protein 68##BC020835|TMEM68|137695|transmembrane protein 68##BC071636|TMEM68|137695|transmembrane protein 68	0.822417	CTCF.p2:-26:0.822
chr11	300081	300231	reg1021516.p2	5.236	+	BC150562 BC150563 NM_001025295	-635	-	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	-11014	+	AF479748 AY154461 NM_138329	-21587	+	NM_006435 TSC_hg19_v1_chr11_+_308199 BC009696 DQ891667 DQ894615 BT009859 CR456894 CR541874 X02490	8014	+	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	13855	+	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	20688	-	BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##AF479748|NLRP6|171389|NLR family, pyrin domain containing 6##AY154461|NLRP6|171389|NLR family, pyrin domain containing 6##NM_138329|NLRP6|171389|NLR family, pyrin domain containing 6##NM_006435|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC009696|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ891667|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ894615|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BT009859|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR456894|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR541874|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##X02490|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3	0.0	
chr1	181473542	181473681	reg1026250.p1	5.236	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-20911	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-415746	+	NM_016545	-415974	+	BC137223 BC137224 AK128654 NM_001009992	557186	-	TSC_hg19_v1_chr1_-_182354649 AK301600	881071	-	TSC_hg19_v1_chr1_-_182357758 BC127883	884152	-	NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase	0.603733	CTCF.p2:1:0.604
chr1	210163057	210163237	reg1029295.p2	5.236	+	AJ617623 TSC_hg19_v1_chr1_+_210111595 AK091517 AX747035 BC130323 BC144154 BC144155 BC144157 AJ617625	-51558	+	NM_001146261 NM_001146262 NM_001146264 NM_153262 TSC_hg19_v1_chr1_+_210111559	-51597	+	BX648514 CU692760 TSC_hg19_v1_chr1_+_210001421	-161737	+	BC012083 NM_019605 AK096381	243064	+	NM_001122834 NM_001170564 AK297193	338449	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	339118	+	AJ617623|SYT14|255928|synaptotagmin XIV##AK091517|SYT14|255928|synaptotagmin XIV##BC130323|SYT14|255928|synaptotagmin XIV##BC144154|SYT14|255928|synaptotagmin XIV##BC144155|SYT14|255928|synaptotagmin XIV##BC144157|SYT14|255928|synaptotagmin XIV##AJ617625|SYT14|255928|synaptotagmin XIV##NM_001146261|SYT14|255928|synaptotagmin XIV##NM_001146262|SYT14|255928|synaptotagmin XIV##NM_001146264|SYT14|255928|synaptotagmin XIV##NM_153262|SYT14|255928|synaptotagmin XIV##BX648514|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##BC012083|SERTAD4|56256|SERTA domain containing 4##NM_019605|SERTAD4|56256|SERTA domain containing 4##AK096381|SERTAD4|56256|SERTA domain containing 4##NM_001122834|HHAT|55733|hedgehog acyltransferase##NM_001170564|HHAT|55733|hedgehog acyltransferase##AK297193|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase	0.958838	CTCF.p2:-43:0.959
chr1	81771692	81771868	reg1028051.p1	5.236	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-2299353	-	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-2656282	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	-2685649	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	147	+	AF104266 AF104938 AF104939 NM_012302	494301	+	AK097722 TSC_hg19_v1_chr1_-_84326308	2554488	-	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.0	
chr19	14688739	14688914	reg1021441.p1	5.236	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	-5977	-	TSC_hg19_v1_chr19_+_14640435 AK001416 AK315412 BC007801 BC013881 BC005952 AF038958 BC002425 BC034484 AF222742 AX771269 AF038959 AB529027 DQ891949 DQ895135 EU832830 GQ129437	-48367	+	AK094087 TSC_hg19_v1_chr19_+_14640406	-48420	+	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	5088	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	96851	-	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	111938	+	CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AK001416|TECR|9524|trans-2,3-enoyl-CoA reductase##AK315412|TECR|9524|trans-2,3-enoyl-CoA reductase##BC007801|TECR|9524|trans-2,3-enoyl-CoA reductase##BC013881|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005952|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038958|TECR|9524|trans-2,3-enoyl-CoA reductase##BC002425|TECR|9524|trans-2,3-enoyl-CoA reductase##BC034484|TECR|9524|trans-2,3-enoyl-CoA reductase##AF222742|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038959|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ891949|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ895135|TECR|9524|trans-2,3-enoyl-CoA reductase##EU832830|TECR|9524|trans-2,3-enoyl-CoA reductase##GQ129437|TECR|9524|trans-2,3-enoyl-CoA reductase##AK094087|TECR|9524|trans-2,3-enoyl-CoA reductase##NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333	0.0	
chr20	49548241	49548413	reg1025455.p2	5.236	+	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	-604	-	AF361220 NM_001010974 NM_017843 NM_198799 TSC_hg19_v1_chr20_+_49411542 AK000502 BC038381 BC047337 AJ511266 BC056883	-136809	+	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	-200258	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	26736	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	27041	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	91330	-	AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##AF361220|BCAS4|55653|breast carcinoma amplified sequence 4##NM_001010974|BCAS4|55653|breast carcinoma amplified sequence 4##NM_017843|BCAS4|55653|breast carcinoma amplified sequence 4##NM_198799|BCAS4|55653|breast carcinoma amplified sequence 4##AK000502|BCAS4|55653|breast carcinoma amplified sequence 4##BC038381|BCAS4|55653|breast carcinoma amplified sequence 4##BC047337|BCAS4|55653|breast carcinoma amplified sequence 4##AJ511266|BCAS4|55653|breast carcinoma amplified sequence 4##BC056883|BCAS4|55653|breast carcinoma amplified sequence 4##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1	0.673497	CTCF.p2:-97:0.507
chr2	127240568	127240652	reg1021885.p1	5.236	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2457746	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-4727373	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-4746145	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	173097	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	173182	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	624131	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.99898	CTCF.p2:-6:0.999
chr2	89894702	89894815	reg1027304.p1	5.236	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-274905	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-381525	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-452169	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	182996	+	TSC_hg19_v1_chr2_+_90211706 Z69013	316960	+	TSC_hg19_v1_chr2_-_91847997 BC030764	1953245	-	BC070334|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus	0.90607	CTCF.p2:-27:0.906
chr5	111021823	111021968	reg1027964.p1	5.236	+	BC042956 TSC_hg19_v1_chr5_-_110848300	-173601	-	AK054566 NM_139164 TSC_hg19_v1_chr5_-_110848234 AK290312 AK310848 BC019632 AK125317 AK308851 AK315863 AK315869	-173693	-	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	-461946	+	NM_001142483	70052	-	TSC_hg19_v1_chr5_-_111092886 BC019068 BC001783 AK309667 AK310585 BX649051 BC072013 BC072443	70991	-	AK315617 TSC_hg19_v1_chr5_-_111092922 NM_004772 U30521	71041	-	BC042956|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK054566|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_139164|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK290312|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK310848|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC019632|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK125317|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK308851|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315863|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315869|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13##BC019068|C5orf13|9315|chromosome 5 open reading frame 13##BX649051|C5orf13|9315|chromosome 5 open reading frame 13##BC072013|C5orf13|9315|chromosome 5 open reading frame 13##BC072443|C5orf13|9315|chromosome 5 open reading frame 13##AK315617|C5orf13|9315|chromosome 5 open reading frame 13##NM_004772|C5orf13|9315|chromosome 5 open reading frame 13##U30521|C5orf13|9315|chromosome 5 open reading frame 13	0.176448	
chr1	14151725	14151818	reg1024351.p2	5.235	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-75830	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-75848	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-75886	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	773423	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	1098948	+	AY505121 NM_001018001	1104524	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.258434	CTCF.p2:-26:0.258
chr12	53721388	53721496	reg1026474.p2	5.235	+	TSC_hg19_v1_chr12_-_53715374 AK293342 BC000659 BC018836 AY237818 NM_001173466 NM_015665	-6065	-	BT006912 DQ893306 DQ893864 TSC_hg19_v1_chr12_-_53715341 AF226048 AJ289857 AK000833 AK222509	-6148	-	TSC_hg19_v1_chr12_-_53715042 AK094302	-6380	-	AB527932 EU446563 BC101549 BC113613 AY150673 AF477981 NM_152860 AF466179	8041	-	AY150674 NM_001173467	8561	-	TSC_hg19_v1_chr12_+_53773935 BC062539 NM_001251825 NM_138473 AF255682 AJ272134	52548	+	AK293342|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BC000659|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BC018836|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AY237818|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##NM_001173466|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##NM_015665|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##BT006912|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##DQ893306|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##DQ893864|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AF226048|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AJ289857|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AK000833|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AK222509|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##AK094302|AAAS|8086|achalasia, adrenocortical insufficiency, alacrimia##EU446563|SP7|121340|Sp7 transcription factor##BC101549|SP7|121340|Sp7 transcription factor##BC113613|SP7|121340|Sp7 transcription factor##AY150673|SP7|121340|Sp7 transcription factor##AF477981|SP7|121340|Sp7 transcription factor##NM_152860|SP7|121340|Sp7 transcription factor##AF466179|SP7|121340|Sp7 transcription factor##AY150674|SP7|121340|Sp7 transcription factor##NM_001173467|SP7|121340|Sp7 transcription factor##BC062539|SP1|6667|Sp1 transcription factor##NM_001251825|SP1|6667|Sp1 transcription factor##NM_138473|SP1|6667|Sp1 transcription factor##AF255682|SP1|6667|Sp1 transcription factor##AJ272134|SP1|6667|Sp1 transcription factor	0.999057	CTCF.p2:0:0.999
chr17	40591325	40591462	reg1035234.p1	5.235	+	AB464659 TSC_hg19_v1_chr17_-_40575275 BC008849 AK298072 AK074512 AK092406 AK298563 AK314389 AX747528 BC066123 NM_012232	-16166	-	TSC_hg19_v1_chr17_-_40540580 AK291933	-50801	-	TSC_hg19_v1_chr17_-_40540493 L29277 NM_003150 NM_139276 AK301200 AK316139	-50861	-	TSC_hg19_v1_chr17_+_40610864 L78933 NM_001130020 NM_001130021 NM_005177 Z71460	19470	+	BC017826 TSC_hg19_v1_chr17_+_40610895 AK223554 AK299784	19492	+	AK316305 TSC_hg19_v1_chr17_+_40610897	19504	+	BC008849|PTRF|284119|polymerase I and transcript release factor##AK298072|PTRF|284119|polymerase I and transcript release factor##AK074512|PTRF|284119|polymerase I and transcript release factor##AK092406|PTRF|284119|polymerase I and transcript release factor##AK298563|PTRF|284119|polymerase I and transcript release factor##AK314389|PTRF|284119|polymerase I and transcript release factor##BC066123|PTRF|284119|polymerase I and transcript release factor##NM_012232|PTRF|284119|polymerase I and transcript release factor##AK291933|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##L29277|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_003150|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_139276|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK301200|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK316139|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##L78933|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_001130020|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_001130021|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_005177|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##Z71460|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##BC017826|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK223554|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK299784|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK316305|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1	0.0	
chr19	2051216	2051396	reg1027284.p1	5.235	+	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-73	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-5065	-	TSC_hg19_v1_chr19_-_2042036 AK001730	-9256	-	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	33937	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	44959	-	TSC_hg19_v1_chr19_-_2096297 AL832474	44988	-	BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK001730|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A	0.992057	CTCF.p2:48:0.992
chr21	48118232	48118396	reg1026396.p1	5.235	+	TSC_hg19_v1_chr21_+_48055589 BC100026	-62700	+	AK223157 TSC_hg19_v1_chr21_+_48055585 BC000727	-62728	+	NM_001242864 NM_001242865 NM_001242866 NM_001535 NM_206962 TSC_hg19_v1_chr21_+_48055572 AK123352 AY786414 FJ436410 FJ436411 FJ436412 U79286 X99209 U80213 AK312573 AL833586	-62771	+	None	None	None	None	None	None	None	None	None	BC100026|PRMT2|3275|protein arginine methyltransferase 2##AK223157|PRMT2|3275|protein arginine methyltransferase 2##BC000727|PRMT2|3275|protein arginine methyltransferase 2##NM_001242864|PRMT2|3275|protein arginine methyltransferase 2##NM_001242865|PRMT2|3275|protein arginine methyltransferase 2##NM_001242866|PRMT2|3275|protein arginine methyltransferase 2##NM_001535|PRMT2|3275|protein arginine methyltransferase 2##NM_206962|PRMT2|3275|protein arginine methyltransferase 2##AK123352|PRMT2|3275|protein arginine methyltransferase 2##AY786414|PRMT2|3275|protein arginine methyltransferase 2##FJ436410|PRMT2|3275|protein arginine methyltransferase 2##FJ436411|PRMT2|3275|protein arginine methyltransferase 2##FJ436412|PRMT2|3275|protein arginine methyltransferase 2##U79286|PRMT2|3275|protein arginine methyltransferase 2##X99209|PRMT2|3275|protein arginine methyltransferase 2##U80213|PRMT2|3275|protein arginine methyltransferase 2##AK312573|PRMT2|3275|protein arginine methyltransferase 2##AL833586|PRMT2|3275|protein arginine methyltransferase 2	1.754169	CTCF.p2:38:0.675	CTCF.p2:96:0.999
chr22	17413633	17413734	reg1027452.p2	5.235	+	BC137521 BC137522 BC144679 AY989815 AK098608 AY534240 BC045548 NM_175878	-111114	-	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	-340114	-	NM_001005239	-963880	-	AB076978 NM_001037814	75428	-	TSC_hg19_v1_chr22_+_17565850 NM_014339	152168	+	TSC_hg19_v1_chr22_+_17565906 BC011624	152219	+	BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_001005239|OR11H1|81061|olfactory receptor, family 11, subfamily H, member 1##AB076978|GAB4|128954|GRB2-associated binding protein family, member 4##NM_001037814|GAB4|128954|GRB2-associated binding protein family, member 4##NM_014339|IL17RA|23765|interleukin 17 receptor A##BC011624|IL17RA|23765|interleukin 17 receptor A	0.111423	
chr4	160113312	160113411	reg1024133.p1	5.235	+	AK058100 NM_152543	-157029	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-423076	+	TSC_hg19_v1_chr4_+_159690177 NM_020840	-423183	+	AK294459 NM_014247	75636	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	2971790	-	TSC_hg19_v1_chr4_-_164088002 AK097352	3974631	-	AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##NM_020840|FNIP2|57600|folliculin interacting protein 2##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.322169	CTCF.p2:5:0.322
chr7	91413909	91414030	reg1028601.p2	5.235	+	TSC_hg19_v1_chr7_+_90893747 AB017363 NM_003505 AF072872 BC051271 AK314996	-520093	+	BC017719 TSC_hg19_v1_chr7_+_90893724	-520268	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	-1074809	+	TSC_hg19_v1_chr7_-_91509979 BC108648 AL832861 AK298469 AK313641 NM_006980 Y09615 AK222730 AK311568	96046	-	TSC_hg19_v1_chr7_+_91570181 NM_005751 NM_147185 AJ131693 AF026245 BC015533 AB019691 AY803272 CU677341	156312	+	AB590319 CU689330 DQ891311 DQ894495 TSC_hg19_v1_chr7_-_91763765 D55653 BC018429	349753	-	AB017363|FZD1|8321|frizzled family receptor 1##NM_003505|FZD1|8321|frizzled family receptor 1##AF072872|FZD1|8321|frizzled family receptor 1##BC051271|FZD1|8321|frizzled family receptor 1##AK314996|FZD1|8321|frizzled family receptor 1##BC017719|FZD1|8321|frizzled family receptor 1##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14##BC108648|MTERF|7978|mitochondrial transcription termination factor##AL832861|MTERF|7978|mitochondrial transcription termination factor##AK298469|MTERF|7978|mitochondrial transcription termination factor##AK313641|MTERF|7978|mitochondrial transcription termination factor##NM_006980|MTERF|7978|mitochondrial transcription termination factor##Y09615|MTERF|7978|mitochondrial transcription termination factor##AK222730|MTERF|7978|mitochondrial transcription termination factor##NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##DQ891311|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##DQ894495|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##D55653|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##BC018429|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1	0.154685	
chr8	75557968	75558119	reg1028688.p1	5.235	+	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	-295353	+	BX537756 BC139832 BC098299 BC098314 BC099736 BC113856 BC114464 NM_020647 BC140875 BC140876	-324515	-	NM_001195797 NM_015364 BC020690 AF168121 AB590737 AB446498	-654423	+	CR749657 NM_015886	178728	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	338866	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	762145	+	AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BX537756|JPH1|56704|junctophilin 1##BC139832|JPH1|56704|junctophilin 1##BC098299|JPH1|56704|junctophilin 1##BC098314|JPH1|56704|junctophilin 1##BC099736|JPH1|56704|junctophilin 1##BC113856|JPH1|56704|junctophilin 1##BC114464|JPH1|56704|junctophilin 1##NM_020647|JPH1|56704|junctophilin 1##BC140875|JPH1|56704|junctophilin 1##BC140876|JPH1|56704|junctophilin 1##NM_001195797|LY96|23643|lymphocyte antigen 96##NM_015364|LY96|23643|lymphocyte antigen 96##BC020690|LY96|23643|lymphocyte antigen 96##AF168121|LY96|23643|lymphocyte antigen 96##AB446498|LY96|23643|lymphocyte antigen 96##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma	0.772431	CTCF.p2:12:0.772
chr10	54969846	54969956	reg1026935.p2	5.234	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-438475	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-895786	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-1510554	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	1591097	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	2388873	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	3151113	-	AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor	0.805148	CTCF.p2:0:0.805
chr14	21133717	21133855	reg1025357.p2	5.234	+	NM_001001968	-23937	-	HQ258082 AY665807 BC130347 BC130349 NM_001024822	-74856	-	BX161458 NM_145250	-75384	-	FJ236304 NM_001145 AK092422 NM_002937	18567	+	TSC_hg19_v1_chr14_+_21152776 AK313989 BC015520 BC054880 BX248010	18990	+	TSC_hg19_v1_chr14_+_21156940 NM_001097577 NM_194431 BC062698 BC020704	23146	+	NM_001001968|OR6S1|341799|olfactory receptor, family 6, subfamily S, member 1##HQ258082|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##AY665807|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BC130347|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BC130349|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##NM_001024822|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BX161458|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##NM_145250|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5##AK092422|RNASE4|6038|ribonuclease, RNase A family, 4##NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4##AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC015520|RNASE4|6038|ribonuclease, RNase A family, 4##BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BX248010|RNASE4|6038|ribonuclease, RNase A family, 4##NM_001097577|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_194431|RNASE4|6038|ribonuclease, RNase A family, 4##BC062698|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC020704|ANG|283|angiogenin, ribonuclease, RNase A family, 5	0.0	
chr15	74346546	74346653	reg1025675.p1	5.234	+	TSC_hg19_v1_chr15_+_74287153 AB384942 CU674024 BT009911	-59443	+	TSC_hg19_v1_chr15_+_74287135 M79462 M79463 M79464 M80185 AB208950	-59460	+	TSC_hg19_v1_chr15_+_74287128 AK300256 AK300951	-59480	+	BC131515 AK292574 AF263742 NM_001038640	28281	-	AK092302 AX747465 AB040898 BC152429 NM_001130136	75107	+	AK309388 NM_001130137 BC028042	75393	+	BT009911|PML|5371|promyelocytic leukemia##M79462|PML|5371|promyelocytic leukemia##M79463|PML|5371|promyelocytic leukemia##M79464|PML|5371|promyelocytic leukemia##M80185|PML|5371|promyelocytic leukemia##AB208950|PML|5371|promyelocytic leukemia##AK300256|PML|5371|promyelocytic leukemia##BC131515|GOLGA6A|342096|golgin A6 family, member A##AK292574|GOLGA6A|342096|golgin A6 family, member A##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001038640|GOLGA6A|342096|golgin A6 family, member A##AK092302|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AB040898|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC152429|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130136|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130137|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC028042|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	0.997141	CTCF.p2:-58:0.997
chr1	59612558	59612739	reg1025072.p1	5.234	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-362913	-	TSC_hg19_v1_chr1_-_59248287 BC009874	-364283	-	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-446896	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	149964	+	NM_001244714 AK054842	163105	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	668004	+	BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##BC009874|JUN|3725|jun proto-oncogene##BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)	0.0	
chr17	38457702	38457849	reg1027980.p1	5.234	+	TSC_hg19_v1_chr17_+_38444176 BC025232 AF022109	-13561	+	TSC_hg19_v1_chr17_+_38444134 NM_001254 U77949	-13635	+	AK313620 TSC_hg19_v1_chr17_+_38444130	-13645	+	NM_000964 BC008727 AK312564	7659	+	NM_001145301 NM_001145302 TSC_hg19_v1_chr17_+_38474476	16705	+	TSC_hg19_v1_chr17_+_38474521 AK292205 FJ487576	16749	+	BC025232|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##AF022109|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##NM_001254|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##U77949|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##AK313620|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##NM_000964|RARA|5914|retinoic acid receptor, alpha##BC008727|RARA|5914|retinoic acid receptor, alpha##AK312564|RARA|5914|retinoic acid receptor, alpha##NM_001145301|RARA|5914|retinoic acid receptor, alpha##NM_001145302|RARA|5914|retinoic acid receptor, alpha##AK292205|RARA|5914|retinoic acid receptor, alpha##FJ487576|RARA|5914|retinoic acid receptor, alpha	0.765283	CTCF.p2:-17:0.765
chr19	1207493	1207674	reg1027512.p1	5.234	+	BC146278 BC148727 TSC_hg19_v1_chr19_+_1207211	-410	+	BC007981 AF035625 BC019334 AK314858 AB209553 EF644172 DQ893232 DQ896561 AB528360 CU675883 U63333 TSC_hg19_v1_chr19_+_1206921	-892	+	TSC_hg19_v1_chr19_+_1205777 NM_000455 AF217978	-1777	+	BC028156 NM_152769	30331	-	TSC_hg19_v1_chr19_+_1241763 BC002389 BC004426 BC018817 NM_001001975 NM_001687	34169	+	AK094357 S87916 S87918 X63422 X63423 TSC_hg19_v1_chr19_+_1241766	34183	+	BC146278|EFNA2|1943|ephrin-A2##BC148727|EFNA2|1943|ephrin-A2##BC007981|STK11|6794|serine/threonine kinase 11##AF035625|STK11|6794|serine/threonine kinase 11##BC019334|STK11|6794|serine/threonine kinase 11##AK314858|STK11|6794|serine/threonine kinase 11##AB209553|STK11|6794|serine/threonine kinase 11##EF644172|STK11|6794|serine/threonine kinase 11##DQ893232|STK11|6794|serine/threonine kinase 11##DQ896561|STK11|6794|serine/threonine kinase 11##U63333|STK11|6794|serine/threonine kinase 11##NM_000455|STK11|6794|serine/threonine kinase 11##AF217978|STK11|6794|serine/threonine kinase 11##BC028156|C19orf26|255057|chromosome 19 open reading frame 26##NM_152769|C19orf26|255057|chromosome 19 open reading frame 26##BC002389|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC004426|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC018817|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001001975|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001687|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##AK094357|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87916|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87918|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63422|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63423|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	0.519256	CTCF.p2:-58:0.519
chr3	114010116	114010297	reg1004334.p2	5.234	+	NM_007136 X65233	-53782	-	AY228457 AY228458 NM_000796 NM_033663 AY228454	-112290	-	TSC_hg19_v1_chr3_+_113775661 AK023022	-234532	+	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	2647	+	AF139460 NM_001164342	92282	-	BC029041 NM_001164347	332846	-	NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##AY228457|DRD3|1814|dopamine receptor D3##AY228458|DRD3|1814|dopamine receptor D3##NM_000796|DRD3|1814|dopamine receptor D3##NM_033663|DRD3|1814|dopamine receptor D3##AY228454|DRD3|1814|dopamine receptor D3##AK023022|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AF139460|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164342|ZBTB20|26137|zinc finger and BTB domain containing 20##BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20	0.0	
chr5	126828783	126828912	reg1016647.p2	5.234	+	NM_032446 CR749437 AK307919 BC020198 AB058676 BC152478	-202313	+	AK126569 NM_001164478 NM_001164479	-419670	-	NM_178450	-462408	-	NM_130809 TSC_hg19_v1_chr5_+_126853331 AL831963 AL832056 AL832600 AJ427339 AJ441110 AJ496322 AJ515158 AJ515428 AJ515429 AK057437 BC017066	24504	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	30347	+	NM_001048252 AB219764	155876	+	NM_032446|MEGF10|84466|multiple EGF-like-domains 10##CR749437|MEGF10|84466|multiple EGF-like-domains 10##AK307919|MEGF10|84466|multiple EGF-like-domains 10##BC020198|MEGF10|84466|multiple EGF-like-domains 10##AB058676|MEGF10|84466|multiple EGF-like-domains 10##BC152478|MEGF10|84466|multiple EGF-like-domains 10##AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63##NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##NM_130809|PRRC1|133619|proline-rich coiled-coil 1##AL831963|PRRC1|133619|proline-rich coiled-coil 1##AL832056|PRRC1|133619|proline-rich coiled-coil 1##AL832600|PRRC1|133619|proline-rich coiled-coil 1##AJ427339|PRRC1|133619|proline-rich coiled-coil 1##AJ441110|PRRC1|133619|proline-rich coiled-coil 1##AJ496322|PRRC1|133619|proline-rich coiled-coil 1##AJ515158|PRRC1|133619|proline-rich coiled-coil 1##AJ515428|PRRC1|133619|proline-rich coiled-coil 1##AJ515429|PRRC1|133619|proline-rich coiled-coil 1##AK057437|PRRC1|133619|proline-rich coiled-coil 1##BC017066|PRRC1|133619|proline-rich coiled-coil 1##AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1##NM_001048252|CTXN3|613212|cortexin 3##AB219764|CTXN3|613212|cortexin 3	0.551215	CTCF.p2:0:0.551
chr6_apd_hap1	3112587	3112718	reg1025526.p2	5.234	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.953188	CTCF.p2:16:0.953
chr9	104740021	104740147	reg1026522.p1	5.234	+	AB075853 BC167432 NM_133445 TSC_hg19_v1_chr9_-_104500930	-239183	-	TSC_hg19_v1_chr9_-_104500218 AB385519 AF416558 AJ416950	-239839	-	AF085237 AF145026 BC066299 AK057524 AK302547 AF400667 BC030595 NM_147180 AK310471	-382832	-	BC058038 NM_001340 AK313349 BC114547 Z46788	1017543	+	TSC_hg19_v1_chr9_+_106856601 AL833191 NM_001042551 NM_006444 BC055081 BC061906 AK307752 AK292599 BC017845 AF092563	2116487	+	TSC_hg19_v1_chr9_+_106856625 AY739716 BC130385 BC144163	2116569	+	AB075853|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##BC167432|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##NM_133445|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AF416558|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AJ416950|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AF085237|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF145026|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC066299|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AK057524|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF400667|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC030595|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##NM_147180|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC058038|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##NM_001340|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##AK313349|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##BC114547|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##Z46788|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##AL833191|SMC2|10592|structural maintenance of chromosomes 2##NM_001042551|SMC2|10592|structural maintenance of chromosomes 2##NM_006444|SMC2|10592|structural maintenance of chromosomes 2##BC055081|SMC2|10592|structural maintenance of chromosomes 2##BC061906|SMC2|10592|structural maintenance of chromosomes 2##AK307752|SMC2|10592|structural maintenance of chromosomes 2##AK292599|SMC2|10592|structural maintenance of chromosomes 2##BC017845|SMC2|10592|structural maintenance of chromosomes 2##AF092563|SMC2|10592|structural maintenance of chromosomes 2##AY739716|SMC2|10592|structural maintenance of chromosomes 2##BC130385|SMC2|10592|structural maintenance of chromosomes 2##BC144163|SMC2|10592|structural maintenance of chromosomes 2	0.063568	
chr10	34862757	34862867	reg1025231.p2	5.233	+	TSC_hg19_v1_chr10_-_33623996 BX648025	-1238814	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1238998	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	-1239359	-	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	241339	-	AK310225 AK300491 NM_001198778 NM_001198779	500400	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	516460	-	BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2	0.56475	CTCF.p2:11:0.565
chr2	164039418	164039514	reg1026688.p1	5.233	+	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-344219	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-344342	-	TSC_hg19_v1_chr2_+_163200633 AK312349 M81637 BC005214 AB209768 AB529141 CU675051 AK295413	-838705	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	553051	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	1385538	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	1438427	-	BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK312349|GCA|25801|grancalcin, EF-hand calcium binding protein##M81637|GCA|25801|grancalcin, EF-hand calcium binding protein##BC005214|GCA|25801|grancalcin, EF-hand calcium binding protein##AB209768|GCA|25801|grancalcin, EF-hand calcium binding protein##AK295413|GCA|25801|grancalcin, EF-hand calcium binding protein##BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14	0.962964	CTCF.p2:-7:0.963
chr2	171343395	171343505	reg1024703.p1	5.233	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	-308765	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-659492	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-662065	-	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	228408	+	TSC_hg19_v1_chr2_+_171571942 AB464708	228527	+	TSC_hg19_v1_chr2_+_171572707 BC069026	229260	+	AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##BC069026|SP5|389058|Sp5 transcription factor	0.929503	CTCF.p2:-10:0.930
chr22	37705816	37705956	reg1025209.p1	5.233	+	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	-27310	+	TSC_hg19_v1_chr22_+_37678548 AK304453 BC017780	-27349	+	AF125349 AF075458 NM_013385 TSC_hg19_v1_chr22_+_37678513	-27418	+	TSC_hg19_v1_chr22_-_37823515 NM_052906	117642	-	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	176459	-	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	209421	-	BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4##AK304453|CYTH4|27128|cytohesin 4##BC017780|CYTH4|27128|cytohesin 4##AF125349|CYTH4|27128|cytohesin 4##AF075458|CYTH4|27128|cytohesin 4##NM_013385|CYTH4|27128|cytohesin 4##NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2##CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10	0.0	
chr9	130673552	130673732	reg1025914.p2	5.233	+	TSC_hg19_v1_chr9_-_130667604 AY358672 AK124217 AK310850	-6027	-	TSC_hg19_v1_chr9_-_130661892 BC036102	-11732	-	TSC_hg19_v1_chr9_-_130661883 AK023900	-11763	-	BC036705 TSC_hg19_v1_chr9_-_130679297 AK292049 AK000600 NM_175039 NM_175040	5618	-	TSC_hg19_v1_chr9_-_130689700 BC042184 NM_173492	16091	-	NM_001135219	19433	-	AY358672|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK124217|LOC100131355|100131355|uncharacterized LOC100131355##AK310850|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC036102|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK023900|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC036705|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AK292049|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AK000600|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##NM_175039|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##NM_175040|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##BC042184|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##NM_173492|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##NM_001135219|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1	0.0	
chr14	100751664	100751805	reg1027614.p1	5.232	+	TSC_hg19_v1_chr14_+_100705474 BC037308 M76541 BC020324 BC065366 AB464361 DQ891638 EU176600 CU691478	-46228	+	TSC_hg19_v1_chr14_+_100705309 M77698	-46422	+	NM_003403 TSC_hg19_v1_chr14_+_100705177	-46592	+	TSC_hg19_v1_chr14_-_100772779 AK096294 AK123821 AK310069 BC142945 AK172788 BX247983 NM_001039355	21105	-	AK092001 AX747302 TSC_hg19_v1_chr14_+_100789675 AB073385 AY569438 AY570298 NM_207117 BX248260 BC137253 BC137254 BC144549	37952	+	X59892 TSC_hg19_v1_chr14_-_100841685 BC095453 M61715	89957	-	BC037308|YY1|7528|YY1 transcription factor##M76541|YY1|7528|YY1 transcription factor##BC020324|YY1|7528|YY1 transcription factor##BC065366|YY1|7528|YY1 transcription factor##DQ891638|YY1|7528|YY1 transcription factor##EU176600|YY1|7528|YY1 transcription factor##M77698|YY1|7528|YY1 transcription factor##NM_003403|YY1|7528|YY1 transcription factor##AK096294|SLC25A29|123096|solute carrier family 25, member 29##AK123821|SLC25A29|123096|solute carrier family 25, member 29##AK310069|SLC25A29|123096|solute carrier family 25, member 29##AK172788|SLC25A29|123096|solute carrier family 25, member 29##BX247983|SLC25A29|123096|solute carrier family 25, member 29##NM_001039355|SLC25A29|123096|solute carrier family 25, member 29##AK092001|SLC25A47|283600|solute carrier family 25, member 47##AB073385|SLC25A47|283600|solute carrier family 25, member 47##AY569438|SLC25A47|283600|solute carrier family 25, member 47##AY570298|SLC25A47|283600|solute carrier family 25, member 47##NM_207117|SLC25A47|283600|solute carrier family 25, member 47##BX248260|SLC25A47|283600|solute carrier family 25, member 47##BC137253|SLC25A47|283600|solute carrier family 25, member 47##BC137254|SLC25A47|283600|solute carrier family 25, member 47##BC144549|SLC25A47|283600|solute carrier family 25, member 47##X59892|WARS|7453|tryptophanyl-tRNA synthetase##BC095453|WARS|7453|tryptophanyl-tRNA synthetase##M61715|WARS|7453|tryptophanyl-tRNA synthetase	0.727902	CTCF.p2:23:0.728
chr15	74243576	74243704	reg1026361.p1	5.232	+	TSC_hg19_v1_chr15_+_74218979 DQ893331	-24599	+	TSC_hg19_v1_chr15_+_74218813 BC015090 L21186	-24825	+	TSC_hg19_v1_chr15_+_74218802 BC068542 AK303982 AK314222	-24839	+	AL109664 AF074953 AL109665 CR542089 DQ064605 AB587381 AK300799 AK222665 AK075244 Y16522 BC034379 BC065249 NM_004809 AF111800 AK302051 TSC_hg19_v1_chr15_-_74284672 AF156557	40963	-	TSC_hg19_v1_chr15_-_74286928 AK091531	43294	-	TSC_hg19_v1_chr15_+_74287096 NM_002675 NM_033238 NM_033239 NM_033240 NM_033244 NM_033246 NM_033247 NM_033249 NM_033250 X63131 AB209411 S50913 M73778 AF230401 AF230402 AF230403 AF230404 AF230405 AF230406 AF230407 AF230408 AF230409 AF230410 AF230411 BC000080 BC020994	43410	+	DQ893331|LOXL1|4016|lysyl oxidase-like 1##BC015090|LOXL1|4016|lysyl oxidase-like 1##L21186|LOXL1|4016|lysyl oxidase-like 1##BC068542|LOXL1|4016|lysyl oxidase-like 1##AK303982|LOXL1|4016|lysyl oxidase-like 1##AK314222|LOXL1|4016|lysyl oxidase-like 1##AL109664|STOML1|9399|stomatin (EPB72)-like 1##AF074953|STOML1|9399|stomatin (EPB72)-like 1##AL109665|STOML1|9399|stomatin (EPB72)-like 1##CR542089|STOML1|9399|stomatin (EPB72)-like 1##DQ064605|STOML1|9399|stomatin (EPB72)-like 1##AK300799|STOML1|9399|stomatin (EPB72)-like 1##AK222665|STOML1|9399|stomatin (EPB72)-like 1##AK075244|STOML1|9399|stomatin (EPB72)-like 1##Y16522|STOML1|9399|stomatin (EPB72)-like 1##BC034379|STOML1|9399|stomatin (EPB72)-like 1##BC065249|STOML1|9399|stomatin (EPB72)-like 1##NM_004809|STOML1|9399|stomatin (EPB72)-like 1##AF111800|STOML1|9399|stomatin (EPB72)-like 1##AK302051|STOML1|9399|stomatin (EPB72)-like 1##AF156557|STOML1|9399|stomatin (EPB72)-like 1##AK091531|STOML1|9399|stomatin (EPB72)-like 1##NM_002675|PML|5371|promyelocytic leukemia##NM_033238|PML|5371|promyelocytic leukemia##NM_033239|PML|5371|promyelocytic leukemia##NM_033240|PML|5371|promyelocytic leukemia##NM_033244|PML|5371|promyelocytic leukemia##NM_033246|PML|5371|promyelocytic leukemia##NM_033247|PML|5371|promyelocytic leukemia##NM_033249|PML|5371|promyelocytic leukemia##NM_033250|PML|5371|promyelocytic leukemia##X63131|PML|5371|promyelocytic leukemia##AB209411|PML|5371|promyelocytic leukemia##S50913|PML|5371|promyelocytic leukemia##M73778|PML|5371|promyelocytic leukemia##AF230401|PML|5371|promyelocytic leukemia##AF230402|PML|5371|promyelocytic leukemia##AF230403|PML|5371|promyelocytic leukemia##AF230404|PML|5371|promyelocytic leukemia##AF230405|PML|5371|promyelocytic leukemia##AF230406|PML|5371|promyelocytic leukemia##AF230407|PML|5371|promyelocytic leukemia##AF230408|PML|5371|promyelocytic leukemia##AF230409|PML|5371|promyelocytic leukemia##AF230410|PML|5371|promyelocytic leukemia##AF230411|PML|5371|promyelocytic leukemia##BC000080|PML|5371|promyelocytic leukemia##BC020994|PML|5371|promyelocytic leukemia	0.807995	CTCF.p2:2:0.808
chr19	43262956	43263067	reg1027313.p1	5.232	+	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	-18410	-	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	-163981	-	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	-230419	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	6813	-	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	120814	-	CU676604 DQ893114 DQ896388 M31125 M33666 NM_002782 X17098 BC020652 NM_001031850	158982	-	M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##DQ893114|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##DQ896388|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M31125|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M33666|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_002782|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##X17098|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC020652|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_001031850|PSG6|5675|pregnancy specific beta-1-glycoprotein 6	0.980187	CTCF.p2:0:0.980
chr19	53688489	53688601	reg1026719.p1	5.232	+	BC002938 BC015611 TSC_hg19_v1_chr19_-_53662285 AY029765 AK289994 AK314603 AK096623 NM_001172674 NM_001172675 NM_032584	-26245	-	DQ925695 DQ925698 BC069668 BC063880 DQ925696 AK002053 AK095504 AY283600 NM_018355 DQ925697 NM_001136038 NM_001164309	-52397	-	BC094880 TSC_hg19_v1_chr19_-_53606670 BC000807 BC012054 NM_001102603 NM_033288 NM_198893	-81899	-	AL832507 AK291403 AK096261 NM_024733	8065	-	BC029855 TSC_hg19_v1_chr19_-_53758075 AK026366	69466	-	TSC_hg19_v1_chr19_-_53758116 BC050038 NM_182609 AK308120 BX648243 AX721115	69578	-	BC002938|ZNF347|84671|zinc finger protein 347##BC015611|ZNF347|84671|zinc finger protein 347##AY029765|ZNF347|84671|zinc finger protein 347##AK289994|ZNF347|84671|zinc finger protein 347##AK314603|ZNF347|84671|zinc finger protein 347##AK096623|ZNF347|84671|zinc finger protein 347##NM_001172674|ZNF347|84671|zinc finger protein 347##NM_001172675|ZNF347|84671|zinc finger protein 347##NM_032584|ZNF347|84671|zinc finger protein 347##DQ925695|ZNF415|55786|zinc finger protein 415##DQ925698|ZNF415|55786|zinc finger protein 415##BC069668|ZNF415|55786|zinc finger protein 415##BC063880|ZNF415|55786|zinc finger protein 415##DQ925696|ZNF415|55786|zinc finger protein 415##AK002053|ZNF415|55786|zinc finger protein 415##AK095504|ZNF415|55786|zinc finger protein 415##AY283600|ZNF415|55786|zinc finger protein 415##NM_018355|ZNF415|55786|zinc finger protein 415##DQ925697|ZNF415|55786|zinc finger protein 415##NM_001136038|ZNF415|55786|zinc finger protein 415##NM_001164309|ZNF415|55786|zinc finger protein 415##BC094880|ZNF160|90338|zinc finger protein 160##BC000807|ZNF160|90338|zinc finger protein 160##BC012054|ZNF160|90338|zinc finger protein 160##NM_001102603|ZNF160|90338|zinc finger protein 160##NM_033288|ZNF160|90338|zinc finger protein 160##NM_198893|ZNF160|90338|zinc finger protein 160##AL832507|ZNF665|79788|zinc finger protein 665##AK291403|ZNF665|79788|zinc finger protein 665##AK096261|ZNF665|79788|zinc finger protein 665##NM_024733|ZNF665|79788|zinc finger protein 665##BC029855|ZNF677|342926|zinc finger protein 677##AK026366|ZNF677|342926|zinc finger protein 677##BC050038|ZNF677|342926|zinc finger protein 677##NM_182609|ZNF677|342926|zinc finger protein 677##AK308120|ZNF677|342926|zinc finger protein 677##BX648243|ZNF677|342926|zinc finger protein 677	0.087661	
chr21	18926991	18927143	reg1028506.p1	5.232	+	TSC_hg19_v1_chr21_+_18885364 BC003684 AK313526 BC010536 Y07593 DQ891181 DQ894363 AF124598 AY072910 AY072911 AY072912 BT019876 GU474812 U90716	-41696	+	TSC_hg19_v1_chr21_+_18885168 NM_001207063 NM_001207064 NM_001207065 NM_001207066 NM_001338	-41904	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	-1824526	+	D64110 TSC_hg19_v1_chr21_-_18985177 BC011957	58073	-	TSC_hg19_v1_chr21_-_18985216 AK289408	58137	-	TSC_hg19_v1_chr21_-_18985237 NM_001130914 NM_006806	58200	-	BC003684|CXADR|1525|coxsackie virus and adenovirus receptor##AK313526|CXADR|1525|coxsackie virus and adenovirus receptor##BC010536|CXADR|1525|coxsackie virus and adenovirus receptor##Y07593|CXADR|1525|coxsackie virus and adenovirus receptor##DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor##DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor##AF124598|CXADR|1525|coxsackie virus and adenovirus receptor##AY072910|CXADR|1525|coxsackie virus and adenovirus receptor##AY072911|CXADR|1525|coxsackie virus and adenovirus receptor##AY072912|CXADR|1525|coxsackie virus and adenovirus receptor##BT019876|CXADR|1525|coxsackie virus and adenovirus receptor##GU474812|CXADR|1525|coxsackie virus and adenovirus receptor##U90716|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor##NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25##D64110|BTG3|10950|BTG family, member 3##BC011957|BTG3|10950|BTG family, member 3##AK289408|BTG3|10950|BTG family, member 3##NM_001130914|BTG3|10950|BTG family, member 3##NM_006806|BTG3|10950|BTG family, member 3	0.8675	CTCF.p2:29:0.868
chr21	44789090	44789270	reg1028344.p2	5.232	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-200006	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-261496	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-261555	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	56809	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	57815	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	290182	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr2	233989531	233989711	reg1025440.p1	5.232	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-64505	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-64562	+	BC069151 BC107053 NM_005383	-92240	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	170645	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	170702	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	170736	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.0	
chr5	179628386	179628529	reg1025426.p1	5.232	+	TSC_hg19_v1_chr5_-_179499095 BC113864 BC114472 AB209800 AY083998 NM_018434 BC108306	-129392	-	AK313089 BC017100 TSC_hg19_v1_chr5_-_179498743 BC082267	-129766	-	TSC_hg19_v1_chr5_-_179334854 AB014576 BC129994 NM_015043 NM_198868	-293605	-	TSC_hg19_v1_chr5_-_179636160 NM_175062 BC036802	7719	-	TSC_hg19_v1_chr5_-_179718968 AK289638	90510	-	TSC_hg19_v1_chr5_-_179719061 NM_001135044 NM_002752 NM_139068 NM_139069 NM_139070	90619	-	BC113864|RNF130|55819|ring finger protein 130##BC114472|RNF130|55819|ring finger protein 130##AB209800|RNF130|55819|ring finger protein 130##AY083998|RNF130|55819|ring finger protein 130##NM_018434|RNF130|55819|ring finger protein 130##BC108306|RNF130|55819|ring finger protein 130##AK313089|RNF130|55819|ring finger protein 130##BC017100|RNF130|55819|ring finger protein 130##BC082267|RNF130|55819|ring finger protein 130##AB014576|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##BC129994|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_015043|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_198868|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_175062|RASGEF1C|255426|RasGEF domain family, member 1C##BC036802|RASGEF1C|255426|RasGEF domain family, member 1C##AK289638|MAPK9|5601|mitogen-activated protein kinase 9##NM_001135044|MAPK9|5601|mitogen-activated protein kinase 9##NM_002752|MAPK9|5601|mitogen-activated protein kinase 9##NM_139068|MAPK9|5601|mitogen-activated protein kinase 9##NM_139069|MAPK9|5601|mitogen-activated protein kinase 9##NM_139070|MAPK9|5601|mitogen-activated protein kinase 9	0.367633	CTCF.p2:-23:0.368
chr10	17451291	17451425	reg1028753.p1	5.231	+	TSC_hg19_v1_chr10_-_17271978 BC078172	-179372	-	TSC_hg19_v1_chr10_+_17271962 AK093924	-179379	+	TSC_hg19_v1_chr10_+_17271887 M25246	-179470	+	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	44856	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	45007	-	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	208015	-	AK093924|VIM|7431|vimentin##M25246|VIM|7431|vimentin##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A	0.032488	
chr11	92074133	92074251	reg1028337.p1	5.231	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-2089782	+	AK290231 NM_001144073 NM_012124	-2117661	-	CU687242 BC002339 BC072461 TSC_hg19_v1_chr11_-_89956218 AF192466 AK226099 AK225565 AK312663 AF123249 AK225365	-2117990	-	NM_001008781	11069	+	BC069163 NM_005959 U25341 AY521019	628647	+	TSC_hg19_v1_chr11_-_92930978 CU690400	856795	-	AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC002339|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC072461|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF192466|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK226099|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225565|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK312663|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF123249|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225365|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B	1.00122	CTCF.p2:-18:0.986
chr16	31985712	31985819	reg1029333.p1	5.231	+	TSC_hg19_v1_chr16_+_31885159 BC036367 BC127088 BC127089 AK292573	-100561	+	AF220492 TSC_hg19_v1_chr16_+_31885131	-100633	+	TSC_hg19_v1_chr16_+_31885114 AK096390	-100649	+	TSC_hg19_v1_chr16_-_32199418 AK300387	213654	-	AB023508 AB023509 BC096700 BC099842 NM_001243722 AK312220 CR541650	278893	+	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	701668	-	BC036367|ZNF267|10308|zinc finger protein 267##BC127088|ZNF267|10308|zinc finger protein 267##BC127089|ZNF267|10308|zinc finger protein 267##AK292573|ZNF267|10308|zinc finger protein 267##AF220492|ZNF267|10308|zinc finger protein 267##AK096390|ZNF267|10308|zinc finger protein 267##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AB023508|TP53TG3|24150|TP53 target 3##AB023509|TP53TG3|24150|TP53 target 3##BC096700|TP53TG3|24150|TP53 target 3##BC099842|TP53TG3|24150|TP53 target 3##NM_001243722|LOC729264|729264|TP53-target gene 3 protein-like##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3	0.754417	CTCF.p2:-8:0.754
chr18	11154364	11154480	reg1007525.p1	5.231	+	NM_022068	-5662	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-628325	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-628366	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	534790	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	597093	+	L10665 TSC_hg19_v1_chr18_+_11752245	597793	+	NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.0	
chr1	89742460	89742602	reg1027728.p1	5.231	+	AY358953 AK090479 AF328727 AF430643 TSC_hg19_v1_chr1_-_89738544 BC031639 AF430642 NM_001134486 NM_052942	-4017	-	AK304245 AB527149 AF288814 AK131094 AL832576 BC070055 BC017889 AK312417 BC008421 NM_052941	-77960	-	AK096141 NM_207398	-100809	-	NM_198460 AK131356	86913	+	NM_001134476 TSC_hg19_v1_chr1_+_89990414	247884	+	TSC_hg19_v1_chr1_+_89990454 BC060782 BC030607	247945	+	AY358953|GBP5|115362|guanylate binding protein 5##AK090479|GBP5|115362|guanylate binding protein 5##AF328727|GBP5|115362|guanylate binding protein 5##AF430643|GBP5|115362|guanylate binding protein 5##BC031639|GBP5|115362|guanylate binding protein 5##AF430642|GBP5|115362|guanylate binding protein 5##NM_001134486|GBP5|115362|guanylate binding protein 5##NM_052942|GBP5|115362|guanylate binding protein 5##AK304245|GBP4|115361|guanylate binding protein 4##AF288814|GBP4|115361|guanylate binding protein 4##AK131094|GBP4|115361|guanylate binding protein 4##AL832576|GBP4|115361|guanylate binding protein 4##BC070055|GBP4|115361|guanylate binding protein 4##BC017889|GBP4|115361|guanylate binding protein 4##AK312417|GBP4|115361|guanylate binding protein 4##BC008421|GBP4|115361|guanylate binding protein 4##NM_052941|GBP4|115361|guanylate binding protein 4##AK096141|GBP7|388646|guanylate binding protein 7##NM_207398|GBP7|388646|guanylate binding protein 7##NM_198460|GBP6|163351|guanylate binding protein family, member 6##AK131356|GBP6|163351|guanylate binding protein family, member 6##NM_001134476|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC060782|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC030607|LRRC8B|23507|leucine rich repeat containing 8 family, member B	0.177344	
chr2	59676537	59676655	reg1032229.p1	5.231	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-1208114	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-1402608	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-1402842	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	1103926	-	AF080216 TSC_hg19_v1_chr2_-_60780784	1104182	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	1306888	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.440763	CTCF.p2:-5:0.441
chr8	30590962	30591141	reg1026750.p1	5.231	+	BC069244 TSC_hg19_v1_chr8_-_30585478 NM_000637 NM_001195102 NM_001195103 NM_001195104	-5585	-	BC035691 TSC_hg19_v1_chr8_-_30585320 X15722 AB519179 AB519180 AB519181 AF228704 CU686724	-5765	-	S67861 TSC_hg19_v1_chr8_-_30515718 X63469 BC030572 BC001775 NM_002095	-75315	-	TSC_hg19_v1_chr8_+_30601674 NM_005671 AK296600 BC020694 D83767 CU676648 AY302140	10635	+	J03805 BT019526 CR541747 AF444006 CU680166 AB590734 X12656 BC012022 TSC_hg19_v1_chr8_-_30669990	78918	-	TSC_hg19_v1_chr8_-_30670318 AK091875	79261	-	BC069244|GSR|2936|glutathione reductase##NM_000637|GSR|2936|glutathione reductase##NM_001195102|GSR|2936|glutathione reductase##NM_001195103|GSR|2936|glutathione reductase##NM_001195104|GSR|2936|glutathione reductase##BC035691|GSR|2936|glutathione reductase##X15722|GSR|2936|glutathione reductase##AB519179|GSR|2936|glutathione reductase##AB519180|GSR|2936|glutathione reductase##AB519181|GSR|2936|glutathione reductase##AF228704|GSR|2936|glutathione reductase##S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##NM_005671|UBXN8|7993|UBX domain protein 8##AK296600|UBXN8|7993|UBX domain protein 8##BC020694|UBXN8|7993|UBX domain protein 8##D83767|UBXN8|7993|UBX domain protein 8##AY302140|UBXN8|7993|UBX domain protein 8##J03805|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##BT019526|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##CR541747|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##AF444006|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##X12656|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##BC012022|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme##AK091875|PPP2CB|5516|protein phosphatase 2, catalytic subunit, beta isozyme	1.115574	CTCF.p2:40:0.375	CTCF.p2:-62:0.740
chrX	94086518	94086621	reg1024524.p1	5.231	+	NM_001171109 NM_001171110 NM_001171111 NM_173698	-1157558	+	AK090772 D50370 TSC_hg19_v1_chrX_-_92928576 BC034954 AK315176 AK223621 BC094729 AK095682 NM_004538	-1157946	-	AJ564931 NM_001168360 NM_001168361 NM_001168362 NM_001168363 AF206516 AF217288 AY861432 AY861433 AY861434 AY861435	-2996088	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	1853182	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	1853385	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	2052401	+	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A##NM_001171110|FAM133A|286499|family with sequence similarity 133, member A##NM_001171111|FAM133A|286499|family with sequence similarity 133, member A##NM_173698|FAM133A|286499|family with sequence similarity 133, member A##AK090772|NAP1L3|4675|nucleosome assembly protein 1-like 3##D50370|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC034954|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK315176|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK223621|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC094729|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK095682|NAP1L3|4675|nucleosome assembly protein 1-like 3##NM_004538|NAP1L3|4675|nucleosome assembly protein 1-like 3##AJ564931|PCDH11X|27328|protocadherin 11 X-linked##NM_001168360|PCDH11X|27328|protocadherin 11 X-linked##NM_001168361|PCDH11X|27328|protocadherin 11 X-linked##NM_001168362|PCDH11X|27328|protocadherin 11 X-linked##NM_001168363|PCDH11X|27328|protocadherin 11 X-linked##AF206516|PCDH11X|27328|protocadherin 11 X-linked##AF217288|PCDH11X|27328|protocadherin 11 X-linked##AY861432|PCDH11X|27328|protocadherin 11 X-linked##AY861433|PCDH11X|27328|protocadherin 11 X-linked##AY861434|PCDH11X|27328|protocadherin 11 X-linked##AY861435|PCDH11X|27328|protocadherin 11 X-linked##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa	0.13747	
chr15	22836840	22836961	reg1027260.p2	5.230	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	-3430	+	AK097517 NM_001001413	-100655	+	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	-363678	-	TSC_hg19_v1_chr15_+_22892666 AY763577	55699	+	NM_014608 TSC_hg19_v1_chr15_+_22892685	55789	+	AK291604 TSC_hg19_v1_chr15_+_22892705	55803	+	NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##AY763577|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1##NM_014608|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1##AK291604|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	0.683815	CTCF.p2:15:0.684
chr15	80263407	80263541	reg1024274.p1	5.230	+	TSC_hg19_v1_chr15_-_80216042 AF249277	-47436	-	NM_001100880 NM_001199757	-47811	-	NM_001199760	-48027	-	AB464467 BT007103 CR541937 CR541962 DQ891109 DQ894290 AY234180 U27467 AL110097 BC016281 AK304026 TSC_hg19_v1_chr15_-_80263526 U29680 Y09397 NM_001114735 NM_004049	77	-	NM_001242911 NM_001242912 NM_001242917 NM_001242918 NM_019006 TSC_hg19_v1_chr15_+_80351970 AF061739	88468	+	TSC_hg19_v1_chr15_+_80352031 BC005283 AK312646	88555	+	AF249277|ST20|400410|suppressor of tumorigenicity 20##NM_001100880|ST20|400410|suppressor of tumorigenicity 20##NM_001199757|ST20|400410|suppressor of tumorigenicity 20##NM_001199760|ST20-MTHFS|100528021|ST20-MTHFS readthrough##BT007103|BCL2A1|597|BCL2-related protein A1##CR541937|BCL2A1|597|BCL2-related protein A1##CR541962|BCL2A1|597|BCL2-related protein A1##DQ891109|BCL2A1|597|BCL2-related protein A1##DQ894290|BCL2A1|597|BCL2-related protein A1##AY234180|BCL2A1|597|BCL2-related protein A1##U27467|BCL2A1|597|BCL2-related protein A1##AL110097|BCL2A1|597|BCL2-related protein A1##BC016281|BCL2A1|597|BCL2-related protein A1##U29680|BCL2A1|597|BCL2-related protein A1##Y09397|BCL2A1|597|BCL2-related protein A1##NM_001114735|BCL2A1|597|BCL2-related protein A1##NM_004049|BCL2A1|597|BCL2-related protein A1##NM_001242911|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242912|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242917|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242918|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_019006|ZFAND6|54469|zinc finger, AN1-type domain 6##AF061739|ZFAND6|54469|zinc finger, AN1-type domain 6##BC005283|ZFAND6|54469|zinc finger, AN1-type domain 6##AK312646|ZFAND6|54469|zinc finger, AN1-type domain 6	0.0	
chr18	2547609	2547727	reg1024983.p2	5.230	+	NM_001117 BC093837 BC101803 S83513	-1642327	+	AK313050 NM_001099733	-1642725	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-1735365	-	AK290001 BC111020 NM_022840	23787	-	NM_006101 BC005239 TSC_hg19_v1_chr18_+_2571579 AK289396 AK313184 BC035617 BC010171	23877	+	TSC_hg19_v1_chr18_+_2571589 AF017790	23927	+	NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4##NM_006101|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC005239|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK289396|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK313184|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC035617|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC010171|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AF017790|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)	0.490158	CTCF.p2:10:0.490
chr19	11545906	11546011	reg1026191.p2	5.230	+	AK056363 BC141828 BC142637 AK294355 AK308072 NM_145045 BC036041 BC050355	-9	-	AK074082 TSC_hg19_v1_chr19_-_11529991 BC064475 AK057147 AK293404 AK298281 BC101756 BC111958 BC143530 BC014426 NM_001035223 NM_001161616	-15970	-	M34986 AB527807 BC112153 BC143697 BC143698 BC143700 AK315097 M60459 BC019092 NM_000121	-51009	-	TSC_hg19_v1_chr19_+_11546106 NM_001001329 NM_002743	218	+	TSC_hg19_v1_chr19_+_11546455 AK296187 AK130663 AK225279	495	+	J03075 TSC_hg19_v1_chr19_+_11546469 Z36798 AK225390	510	+	AK056363|CCDC151|115948|coiled-coil domain containing 151##BC141828|CCDC151|115948|coiled-coil domain containing 151##BC142637|CCDC151|115948|coiled-coil domain containing 151##AK294355|CCDC151|115948|coiled-coil domain containing 151##AK308072|CCDC151|115948|coiled-coil domain containing 151##NM_145045|CCDC151|115948|coiled-coil domain containing 151##BC036041|CCDC151|115948|coiled-coil domain containing 151##BC050355|CCDC151|115948|coiled-coil domain containing 151##BC064475|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK057147|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK293404|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK298281|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC101756|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC111958|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC143530|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC014426|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##NM_001035223|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##NM_001161616|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##M34986|EPOR|2057|erythropoietin receptor##BC112153|EPOR|2057|erythropoietin receptor##BC143697|EPOR|2057|erythropoietin receptor##BC143698|EPOR|2057|erythropoietin receptor##BC143700|EPOR|2057|erythropoietin receptor##AK315097|EPOR|2057|erythropoietin receptor##M60459|EPOR|2057|erythropoietin receptor##BC019092|EPOR|2057|erythropoietin receptor##NM_000121|EPOR|2057|erythropoietin receptor##NM_001001329|PRKCSH|5589|protein kinase C substrate 80K-H##NM_002743|PRKCSH|5589|protein kinase C substrate 80K-H##AK296187|PRKCSH|5589|protein kinase C substrate 80K-H##AK130663|PRKCSH|5589|protein kinase C substrate 80K-H##AK225279|PRKCSH|5589|protein kinase C substrate 80K-H##J03075|PRKCSH|5589|protein kinase C substrate 80K-H##Z36798|PRKCSH|5589|protein kinase C substrate 80K-H##AK225390|PRKCSH|5589|protein kinase C substrate 80K-H	0.116648	
chr2	238064198	238064365	reg1022976.p2	5.230	+	TSC_hg19_v1_chr2_+_237994551 AK289891 BC067774 AK308962 U51205 BC003090 BC080617 CR456994 CU678366	-69704	+	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	-69761	+	TSC_hg19_v1_chr2_-_237994424 AK056246	-69844	-	TSC_hg19_v1_chr2_-_238322786 AK092021 AX747317 AK304870 BC144595 BC150625 BC171790	258504	-	AK308451 TSC_hg19_v1_chr2_-_238322808 BX647500	258528	-	AK303290 TSC_hg19_v1_chr2_-_238322814	258533	-	AK289891|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK308962|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##U51205|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC003090|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC080617|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##CR456994|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK092021|COL6A3|1293|collagen, type VI, alpha 3##AK304870|COL6A3|1293|collagen, type VI, alpha 3##BC144595|COL6A3|1293|collagen, type VI, alpha 3##BC150625|COL6A3|1293|collagen, type VI, alpha 3##BC171790|COL6A3|1293|collagen, type VI, alpha 3##AK308451|COL6A3|1293|collagen, type VI, alpha 3##BX647500|COL6A3|1293|collagen, type VI, alpha 3##AK303290|COL6A3|1293|collagen, type VI, alpha 3	0.0	
chr6	163837953	163838092	reg1025498.p2	5.230	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	-1790	+	TSC_hg19_v1_chr6_+_163835795 AF272349	-2232	+	TSC_hg19_v1_chr6_+_163835675 AB067798 AB067799 AB067800 AB067801 NM_006775 NM_206853 NM_206854 NM_206855	-2350	+	AL050218 TSC_hg19_v1_chr6_+_163984651	146591	+	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	1885070	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	2237674	-	BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##AB067798|QKI|9444|QKI, KH domain containing, RNA binding##AB067799|QKI|9444|QKI, KH domain containing, RNA binding##AB067800|QKI|9444|QKI, KH domain containing, RNA binding##AB067801|QKI|9444|QKI, KH domain containing, RNA binding##NM_006775|QKI|9444|QKI, KH domain containing, RNA binding##NM_206853|QKI|9444|QKI, KH domain containing, RNA binding##NM_206854|QKI|9444|QKI, KH domain containing, RNA binding##NM_206855|QKI|9444|QKI, KH domain containing, RNA binding##AL050218|QKI|9444|QKI, KH domain containing, RNA binding##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A	0.0	
chr1	195703102	195703211	reg1027267.p1	5.229	+	AF288390 BC022507 NM_003783	-2547424	-	TSC_hg19_v1_chr1_+_193091308 BC007325 AF312865 AK314772 AB590625 CU688012 EU831787 EU831865 BC011808	-2611800	+	TSC_hg19_v1_chr1_+_193091242 AK300929 BC065037	-2611917	+	EU251076 BC103947 BC103948 BC103949 BC103950 AY359444 NM_198503 BX647852 AK309729 TSC_hg19_v1_chr1_-_196577612	874369	-	TSC_hg19_v1_chr1_-_196577676 AK131498	874526	-	NM_000186 NM_001014975 TSC_hg19_v1_chr1_+_196621172 AK291395 AK225649 X07523 Y00716 BC037285 BC012610 BC110643 BC073982 BC142699 CU691466	917971	+	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC007325|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF312865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK314772|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831787|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK300929|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC065037|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU251076|KCNT2|343450|potassium channel, subfamily T, member 2##BC103947|KCNT2|343450|potassium channel, subfamily T, member 2##BC103948|KCNT2|343450|potassium channel, subfamily T, member 2##BC103949|KCNT2|343450|potassium channel, subfamily T, member 2##BC103950|KCNT2|343450|potassium channel, subfamily T, member 2##AY359444|KCNT2|343450|potassium channel, subfamily T, member 2##NM_198503|KCNT2|343450|potassium channel, subfamily T, member 2##BX647852|KCNT2|343450|potassium channel, subfamily T, member 2##AK309729|KCNT2|343450|potassium channel, subfamily T, member 2##AK131498|KCNT2|343450|potassium channel, subfamily T, member 2##NM_000186|CFH|3075|complement factor H##NM_001014975|CFH|3075|complement factor H##AK291395|CFH|3075|complement factor H##AK225649|CFH|3075|complement factor H##X07523|CFH|3075|complement factor H##Y00716|CFH|3075|complement factor H##BC037285|CFH|3075|complement factor H##BC012610|CFH|3075|complement factor H##BC110643|CFH|3075|complement factor H##BC073982|CFH|3075|complement factor H##BC142699|CFH|3075|complement factor H	0.857582	CTCF.p2:12:0.858
chr13	100310998	100311138	reg1028102.p1	5.229	+	TSC_hg19_v1_chr13_+_100258943 NM_206808 AK300510 BC034360 AK095506 AF428253 CU689862	-52148	+	BC041830 TSC_hg19_v1_chr13_+_100229390	-81691	+	TSC_hg19_v1_chr13_+_100153777 BC130293	-157286	+	AF378304 NM_033132	313101	-	TSC_hg19_v1_chr13_+_100633453 AK298232	322387	+	TSC_hg19_v1_chr13_+_100634037 NM_007129	322952	+	NM_206808|CLYBL|171425|citrate lyase beta like##AK300510|CLYBL|171425|citrate lyase beta like##BC034360|CLYBL|171425|citrate lyase beta like##AK095506|CLYBL|171425|citrate lyase beta like##AF428253|CLYBL|171425|citrate lyase beta like##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2##AF378304|ZIC5|85416|Zic family member 5##NM_033132|ZIC5|85416|Zic family member 5##NM_007129|ZIC2|7546|Zic family member 2	0.0	
chr2	99081497	99081678	reg1024686.p2	5.229	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-20229	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-118682	+	DQ426863 NM_001079878 NM_001298 DQ067460	-118954	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	143355	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	143463	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	143483	+	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)	0.0	
chr4	85450452	85450590	reg1028863.p1	5.229	+	NM_006168	-31135	-	TSC_hg19_v1_chr4_+_84457420 DQ345298 BC090956 AY358100 NM_032717 DQ324782	-992940	+	TSC_hg19_v1_chr4_+_84457260 AK055749 AK223543	-993249	+	NM_001263 U65887	53572	+	NM_014991	437022	-	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	945822	+	NM_006168|NKX6-1|4825|NK6 homeobox 1##DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK055749|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK223543|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24	0.824307	CTCF.p2:-2:0.824
chr6	24274844	24274945	reg1025425.p1	5.229	+	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	-148464	+	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	-1705169	+	X54394 X54393 GQ305133 M58594 NM_001163558	-1971847	-	AF181722 NM_181337	82236	+	AF181721 NM_016356	83385	-	BC050704 NM_001195610	108625	-	AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1##AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2##BC050704|DCDC2|51473|doublecortin domain containing 2##NM_001195610|DCDC2|51473|doublecortin domain containing 2	0.270039	CTCF.p2:11:0.270
chr7	101500008	101500189	reg1019982.p1	5.229	+	M74099 NM_181552	-39217	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-40889	+	BC002778 NM_138403	-227523	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	428299	+	TSC_hg19_v1_chr7_+_101928431 AB000520	428345	+	NM_001146210	496790	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.0	
chr1	149683346	149683439	reg1026866.p1	5.228	+	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	-130369	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	-284196	-	NM_001164261 NM_001164262	-877378	+	X14355 AK311303 NM_000566 X14356 AK291451 BC032634 AB527585 BC152383 CU689454 DQ890842 DQ893997 L03418	70880	+	BC110793 AK289664 AK299108 AK296916 NM_001024599 NM_001161334	100526	-	NM_001123375	101843	-	AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##X14355|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##NM_000566|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##X14356|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK291451|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC032634|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC152383|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ890842|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ893997|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##L03418|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##AK289664|HIST2H2BF|440689|histone cluster 2, H2bf##AK299108|HIST2H2BF|440689|histone cluster 2, H2bf##AK296916|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001161334|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001123375|HIST2H3D|653604|histone cluster 2, H3d	0.0	
chr1	168204606	168204731	reg1026894.p2	5.228	+	TSC_hg19_v1_chr1_+_168195262 BC068098 CU686619	-9375	+	TSC_hg19_v1_chr1_+_168195254 AK290325 NM_199344	-9417	+	AK091404 AX746960 AL035297 TSC_hg19_v1_chr1_+_168195245	-9424	+	AJ010277 NM_005149 BC093664 BC093666 EU446671	45634	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	308549	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	341124	+	BC068098|SFT2D2|375035|SFT2 domain containing 2##AK290325|SFT2D2|375035|SFT2 domain containing 2##NM_199344|SFT2D2|375035|SFT2 domain containing 2##AL035297|SFT2D2|375035|SFT2 domain containing 2##AJ010277|TBX19|9095|T-box 19##NM_005149|TBX19|9095|T-box 19##BC093664|TBX19|9095|T-box 19##BC093666|TBX19|9095|T-box 19##EU446671|TBX19|9095|T-box 19##BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1	0.66738	CTCF.p2:-10:0.667
chr1	18629313	18629441	reg1003448.p1	5.228	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	-195100	+	AK057339 NM_030812 BC028909 U20582	-547531	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	-684512	+	NM_152375	178046	+	NM_001135254 NM_002584 NM_013945 X96743	328122	+	NM_152232 AB527225	556778	-	AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_152375|KLHDC7A|127707|kelch domain containing 7A##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2	0.0	
chr12	103835326	103835489	reg1025639.p1	5.228	+	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-483315	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-483886	+	L47726 NM_000277 U49897	-524027	-	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	54339	-	AY311388 AJ295695 NM_017564 AB052958	145654	+	AB032773 TSC_hg19_v1_chr12_-_104234857	399417	-	DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3	0.0	
chr1	70994571	70994669	reg1027564.p2	5.228	+	TSC_hg19_v1_chr1_+_70876950 NM_001190463 NM_001902 NM_153742 AK310269 AK303946 AK223376 BC015807 S52028 S52784 EU832313 EU832398 BT006882	-117640	+	TSC_hg19_v1_chr1_+_70820493 NM_001031693 NM_001036645 NM_001036646 AF126164 BC010922 AF126163	-174043	+	TSC_hg19_v1_chr1_-_70820406 BC016937 BC028840 AL136717 NM_030816	-174215	-	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	518759	-	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	552087	-	NM_005455 NM_203350	552351	-	NM_001190463|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001902|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_153742|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK310269|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK303946|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK223376|CTH|1491|cystathionase (cystathionine gamma-lyase)##BC015807|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52028|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52784|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832313|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832398|CTH|1491|cystathionase (cystathionine gamma-lyase)##BT006882|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001031693|HHLA3|11147|HERV-H LTR-associating 3##NM_001036645|HHLA3|11147|HERV-H LTR-associating 3##NM_001036646|HHLA3|11147|HERV-H LTR-associating 3##AF126164|HHLA3|11147|HERV-H LTR-associating 3##BC010922|HHLA3|11147|HERV-H LTR-associating 3##AF126163|HHLA3|11147|HERV-H LTR-associating 3##BC016937|ANKRD13C|81573|ankyrin repeat domain 13C##BC028840|ANKRD13C|81573|ankyrin repeat domain 13C##AL136717|ANKRD13C|81573|ankyrin repeat domain 13C##NM_030816|ANKRD13C|81573|ankyrin repeat domain 13C##AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2	0.876676	CTCF.p2:-8:0.877
chr2	139244526	139244646	reg1025372.p1	5.228	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	-522652	+	NM_001080427	-1496125	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-1721470	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	14807	+	TSC_hg19_v1_chr2_+_139259500 AK021919	14904	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	293220	-	NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2	0.027886	
chr22	35747012	35747192	reg1001835.p2	5.228	+	TSC_hg19_v1_chr22_+_35695886 AK097066 AK297827 AK295918 AK296670 AK314522 AK097926 CR456595 BC005144 BC040006 BC046151 AB463301 CU013195 CU013483 CU692314	-51206	+	TSC_hg19_v1_chr22_+_35695855 NM_001135730 NM_001135732 NM_005488 AK026576 AJ006973 AY358980	-51271	+	AK293694 NM_001135729	-51835	+	CR456505 NM_002133 TSC_hg19_v1_chr22_+_35777085 X06985	29966	+	TSC_hg19_v1_chr22_+_35777088 AK313120 BC001491 M23041 AB528477 BT019785 CR541945 CR541968 CU013103 CU013391 DQ892310 DQ895510 JF323038	30024	+	AF051791 TSC_hg19_v1_chr22_+_35779219	32060	+	AK097066|TOM1|10043|target of myb1 (chicken)##AK297827|TOM1|10043|target of myb1 (chicken)##AK295918|TOM1|10043|target of myb1 (chicken)##AK296670|TOM1|10043|target of myb1 (chicken)##AK314522|TOM1|10043|target of myb1 (chicken)##AK097926|TOM1|10043|target of myb1 (chicken)##CR456595|TOM1|10043|target of myb1 (chicken)##BC040006|TOM1|10043|target of myb1 (chicken)##BC046151|TOM1|10043|target of myb1 (chicken)##CU013195|TOM1|10043|target of myb1 (chicken)##CU013483|TOM1|10043|target of myb1 (chicken)##NM_001135730|TOM1|10043|target of myb1 (chicken)##NM_001135732|TOM1|10043|target of myb1 (chicken)##NM_005488|TOM1|10043|target of myb1 (chicken)##AK026576|TOM1|10043|target of myb1 (chicken)##AJ006973|TOM1|10043|target of myb1 (chicken)##AY358980|TOM1|10043|target of myb1 (chicken)##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)##CR456505|HMOX1|3162|heme oxygenase (decycling) 1##NM_002133|HMOX1|3162|heme oxygenase (decycling) 1##X06985|HMOX1|3162|heme oxygenase (decycling) 1##AK313120|HMOX1|3162|heme oxygenase (decycling) 1##BC001491|HMOX1|3162|heme oxygenase (decycling) 1##M23041|HMOX1|3162|heme oxygenase (decycling) 1##BT019785|HMOX1|3162|heme oxygenase (decycling) 1##CR541945|HMOX1|3162|heme oxygenase (decycling) 1##CR541968|HMOX1|3162|heme oxygenase (decycling) 1##CU013103|HMOX1|3162|heme oxygenase (decycling) 1##CU013391|HMOX1|3162|heme oxygenase (decycling) 1##DQ892310|HMOX1|3162|heme oxygenase (decycling) 1##DQ895510|HMOX1|3162|heme oxygenase (decycling) 1##JF323038|HMOX1|3162|heme oxygenase (decycling) 1##AF051791|HMOX1|3162|heme oxygenase (decycling) 1	0.0	
chr10	102998659	102998764	reg1026418.p1	5.227	+	BC136321 BC069156 NM_006562 X90828	-10009	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-107533	+	BC019674 NM_001085398	-107809	-	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	115161	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	349218	-	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	349298	-	BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda	0.0	
chr1	247844739	247844875	reg1029414.p1	5.227	+	AB529295 NM_001005487 BC136736 BC136738	-8454	-	BC136712 BC136713 NM_001001914	-75936	+	NM_001001915	-93146	+	NM_001005286 BC137142 BC137143	31273	-	AB529299 NM_012353	76900	-	AB463968 NM_001001966	134223	-	NM_001005487|OR13G1|441933|olfactory receptor, family 13, subfamily G, member 1##BC136736|OR13G1|441933|olfactory receptor, family 13, subfamily G, member 1##BC136738|OR13G1|441933|olfactory receptor, family 13, subfamily G, member 1##BC136712|OR2G3|81469|olfactory receptor, family 2, subfamily G, member 3##BC136713|OR2G3|81469|olfactory receptor, family 2, subfamily G, member 3##NM_001001914|OR2G3|81469|olfactory receptor, family 2, subfamily G, member 3##NM_001001915|OR2G2|81470|olfactory receptor, family 2, subfamily G, member 2##NM_001005286|OR6F1|343169|olfactory receptor, family 6, subfamily F, member 1##BC137142|OR6F1|343169|olfactory receptor, family 6, subfamily F, member 1##BC137143|OR6F1|343169|olfactory receptor, family 6, subfamily F, member 1##NM_012353|OR1C1|26188|olfactory receptor, family 1, subfamily C, member 1##NM_001001966|OR14A16|284532|olfactory receptor, family 14, subfamily A, member 16	0.998452	CTCF.p2:-13:0.998
chr22	46959720	46959901	reg1007675.p2	5.227	+	AF231024 NM_014246 TSC_hg19_v1_chr22_-_46933142	-26696	-	TSC_hg19_v1_chr22_+_46731810 AK303020	-228000	+	TSC_hg19_v1_chr22_+_46731615 AB178028 AK001002 AK295173 AK290712 BC066593 BC080631 CR456445 BC027991 BC012076 AB463324 CU013043 CU013331	-228181	+	CR456470 NM_015124 BC129837 AB463563 CU013020 CU013308	62866	+	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	174269	-	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	174345	-	AF231024|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##NM_014246|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##AK303020|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AB178028|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK001002|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK295173|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK290712|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC066593|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC080631|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456445|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC027991|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC012076|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013043|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013331|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456470|GRAMD4|23151|GRAM domain containing 4##NM_015124|GRAMD4|23151|GRAM domain containing 4##BC129837|GRAMD4|23151|GRAM domain containing 4##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase	0.0	
chr5	39005844	39005969	reg1025145.p2	5.227	+	TSC_hg19_v1_chr5_+_38846260 BC125209 BC125210	-159611	+	TSC_hg19_v1_chr5_+_38846113 NM_003999 BC010943 U60805 AK304016 BC063468	-159832	+	NM_001168355 TSC_hg19_v1_chr5_+_38845959	-159947	+	CU688716 DQ891672 DQ894858 TSC_hg19_v1_chr5_-_39074493 AK128358 CR749280	68579	-	TSC_hg19_v1_chr5_-_39074499 AY515854 BC029608 BC137163 BC137164 BC144509 NM_152756	68591	-	AF198052 U93049 AF001862 TSC_hg19_v1_chr5_-_39203164	197211	-	BC125209|OSMR|9180|oncostatin M receptor##BC125210|OSMR|9180|oncostatin M receptor##NM_003999|OSMR|9180|oncostatin M receptor##BC010943|OSMR|9180|oncostatin M receptor##U60805|OSMR|9180|oncostatin M receptor##AK304016|OSMR|9180|oncostatin M receptor##BC063468|OSMR|9180|oncostatin M receptor##NM_001168355|OSMR|9180|oncostatin M receptor##DQ891672|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##DQ894858|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AK128358|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##CR749280|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AY515854|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC029608|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137163|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137164|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC144509|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##NM_152756|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AF198052|FYB|2533|FYN binding protein##U93049|FYB|2533|FYN binding protein##AF001862|FYB|2533|FYN binding protein	0.437787	CTCF.p2:-20:0.438
chr6	158185338	158185462	reg1027678.p1	5.227	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-382861	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-440183	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-440816	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	58889	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	58974	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	217487	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.0	
chr11	109963829	109963942	reg1022673.p2	5.226	+	AK095101 TSC_hg19_v1_chr11_+_109963524	-357	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-670986	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-671042	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	245	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	203428	-	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	336831	+	AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1	0.01836	
chr13	30288109	30288260	reg1024463.p1	5.226	+	TSC_hg19_v1_chr13_-_30169826 NM_003045	-118364	-	X59155 X57303 TSC_hg19_v1_chr13_-_30169595 AK312818 BC063303	-118563	-	AK301633 TSC_hg19_v1_chr13_+_30070532	-217677	+	AK307361 AM393248 AM393364 CR533458 AF044221 AL080177 AK311846 TSC_hg19_v1_chr13_-_30423999	135615	-	BC059385 BC044582 TSC_hg19_v1_chr13_-_30424481	136222	-	TSC_hg19_v1_chr13_-_30424719 AK056580	136518	-	NM_003045|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK301633|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK307361|UBL3|5412|ubiquitin-like 3##AM393248|UBL3|5412|ubiquitin-like 3##AM393364|UBL3|5412|ubiquitin-like 3##CR533458|UBL3|5412|ubiquitin-like 3##AF044221|UBL3|5412|ubiquitin-like 3##AL080177|UBL3|5412|ubiquitin-like 3##AK311846|UBL3|5412|ubiquitin-like 3##BC059385|UBL3|5412|ubiquitin-like 3##BC044582|UBL3|5412|ubiquitin-like 3##AK056580|UBL3|5412|ubiquitin-like 3	0.503688	CTCF.p2:-17:0.504
chr3	142706083	142706181	reg1023695.p1	5.226	+	TSC_hg19_v1_chr3_+_142682794 BC062727	-23302	+	AK123932 BC118666 BC122527 NM_198504 AY424287	-23917	-	CR536570 TSC_hg19_v1_chr3_-_142607926 AB528798 AF098269 BC006265 AK315121 AY035400 AK223633 AY358557 AK075478 NM_013363	-98236	-	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	14298	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	132519	+	BC067737 TSC_hg19_v1_chr3_+_142895211	189039	+	BC062727|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK123932|PAQR9|344838|progestin and adipoQ receptor family member IX##BC118666|PAQR9|344838|progestin and adipoQ receptor family member IX##BC122527|PAQR9|344838|progestin and adipoQ receptor family member IX##NM_198504|PAQR9|344838|progestin and adipoQ receptor family member IX##AY424287|PAQR9|344838|progestin and adipoQ receptor family member IX##CR536570|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AF098269|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##BC006265|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK315121|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AY035400|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK223633|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AY358557|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##AK075478|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##NM_013363|PCOLCE2|26577|procollagen C-endopeptidase enhancer 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2	0.977274	CTCF.p2:-15:0.977
chr4	140871839	140871964	reg1024478.p1	5.225	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	-284767	+	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	-284911	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-394468	-	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	202437	-	NM_018717 TSC_hg19_v1_chr4_-_141075339	203431	-	AK027797 NM_032547	306538	+	AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)##NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)##AK027797|SCOC|60592|short coiled-coil protein##NM_032547|SCOC|60592|short coiled-coil protein	0.0	
chr6_apd_hap1	4108865	4108967	reg1027148.p2	5.225	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.08447	
chr12	56665055	56665190	reg1026215.p1	5.224	+	TSC_hg19_v1_chr12_+_56661038 BC026922 NM_001099337	-4071	+	BC047444 TSC_hg19_v1_chr12_+_56660935 AY358861	-4189	+	TSC_hg19_v1_chr12_+_56660725 AK057003 BC073923	-4376	+	BC000105 TSC_hg19_v1_chr12_-_56679730 AF147410 AK293263	14679	-	AF047042 CU679623 BC072016 TSC_hg19_v1_chr12_-_56694071 AK074956 AK296249	28909	-	TSC_hg19_v1_chr12_-_56694090 AK095856 BC010106	28974	-	BC026922|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)##NM_001099337|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)##BC047444|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)##AY358861|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)##AK057003|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)##BC073923|COQ10A|93058|coenzyme Q10 homolog A (S. cerevisiae)##BC000105|CS|1431|citrate synthase##AF147410|CS|1431|citrate synthase##AK293263|CS|1431|citrate synthase##AF047042|CS|1431|citrate synthase##BC072016|CS|1431|citrate synthase##AK074956|CS|1431|citrate synthase##AK296249|CS|1431|citrate synthase##AK095856|CS|1431|citrate synthase##BC010106|CS|1431|citrate synthase	0.913922	CTCF.p2:-26:0.914
chr19	45640626	45640786	reg1025350.p2	5.224	+	TSC_hg19_v1_chr19_+_45596436 NM_019121	-44284	+	TSC_hg19_v1_chr19_+_45596205 BC035704	-44491	+	TSC_hg19_v1_chr19_+_45582529 NM_001007270 NM_001007269 NM_024707 AK024018 BC007793	-58193	+	NM_198478	22701	-	TSC_hg19_v1_chr19_-_45681496 FJ418644 BC001907 NM_024108 BC004450 AF161407	40772	-	NM_212550 AK296695 TSC_hg19_v1_chr19_+_45682022	41307	+	NM_019121|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##BC035704|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##NM_001007270|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_001007269|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_024707|GEMIN7|79760|gem (nuclear organelle) associated protein 7##AK024018|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC007793|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_198478|NKPD1|284353|NTPase, KAP family P-loop domain containing 1##FJ418644|TRAPPC6A|79090|trafficking protein particle complex 6A##BC001907|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_024108|TRAPPC6A|79090|trafficking protein particle complex 6A##BC004450|TRAPPC6A|79090|trafficking protein particle complex 6A##AF161407|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_212550|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3##AK296695|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3	0.018638	
chr21	35267194	35267295	reg1026354.p2	5.224	+	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-76574	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-252389	+	BC033023 AK315707 AF029689 AF098798 BC022827 BC013155 TSC_hg19_v1_chr21_-_35014048 BX647276 BX648547 AK001293 NM_145858	-253158	-	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	20848	-	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	178597	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	178685	+	AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC033023|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##AK315707|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##AF029689|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##AF098798|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##BC022827|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##BC013155|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##BX647276|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##BX648547|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##AK001293|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##NM_145858|CRYZL1|9946|crystallin, zeta (quinone reductase)-like 1##BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6	0.0	
chr2	71192175	71192293	reg1026490.p1	5.224	+	AK291121 NM_001692 BC063411 AK313194 AK301542 BC035978 M25809 AK223151 CU687698 CU690248	-29192	+	TSC_hg19_v1_chr2_+_71127738 BC006336 AB527952 BT007035	-64496	+	TSC_hg19_v1_chr2_+_71127724 NM_012476 Y17791	-64515	+	BC035234 NM_001115116 NM_024933	13340	+	BC010656 AK074840 TSC_hg19_v1_chr2_-_71219046	26797	-	AK315543 TSC_hg19_v1_chr2_-_71221930	29648	-	AK291121|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##NM_001692|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC063411|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK313194|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK301542|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC035978|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##M25809|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK223151|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC006336|VAX2|25806|ventral anterior homeobox 2##BT007035|VAX2|25806|ventral anterior homeobox 2##NM_012476|VAX2|25806|ventral anterior homeobox 2##Y17791|VAX2|25806|ventral anterior homeobox 2##BC035234|ANKRD53|79998|ankyrin repeat domain 53##NM_001115116|ANKRD53|79998|ankyrin repeat domain 53##NM_024933|ANKRD53|79998|ankyrin repeat domain 53##BC010656|TEX261|113419|testis expressed 261##AK074840|TEX261|113419|testis expressed 261##AK315543|TEX261|113419|testis expressed 261	0.801998	CTCF.p2:-22:0.802
chr2	8425223	8425385	reg1027275.p1	5.223	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1367717	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1407441	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1418601	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	396899	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	552415	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	718517	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.539214	CTCF.p2:-12:0.539
chr19	44173460	44173578	reg1026583.p2	5.222	+	AB528095 TSC_hg19_v1_chr19_-_44143948 BC068457 AK313028 AF363368 BC113963 NM_145296	-29532	-	NM_182498	-49506	-	BC015950 TSC_hg19_v1_chr19_-_44123754 AY257197 BC045799	-49770	-	AF257789 CR456952 AB464026 DQ893017 DQ896262 M83246 TSC_hg19_v1_chr19_-_44174320 AK290774 AY029180 X51675 X74039 BC002788	784	-	NM_001005376 NM_001005377 NM_002659	978	-	BC033853 NM_019612 BC066939	46706	+	BC068457|CADM4|199731|cell adhesion molecule 4##AK313028|CADM4|199731|cell adhesion molecule 4##AF363368|CADM4|199731|cell adhesion molecule 4##BC113963|CADM4|199731|cell adhesion molecule 4##NM_145296|CADM4|199731|cell adhesion molecule 4##NM_182498|ZNF428|126299|zinc finger protein 428##BC015950|ZNF428|126299|zinc finger protein 428##AY257197|ZNF428|126299|zinc finger protein 428##BC045799|ZNF428|126299|zinc finger protein 428##AF257789|PLAUR|5329|plasminogen activator, urokinase receptor##CR456952|PLAUR|5329|plasminogen activator, urokinase receptor##DQ893017|PLAUR|5329|plasminogen activator, urokinase receptor##DQ896262|PLAUR|5329|plasminogen activator, urokinase receptor##M83246|PLAUR|5329|plasminogen activator, urokinase receptor##AK290774|PLAUR|5329|plasminogen activator, urokinase receptor##AY029180|PLAUR|5329|plasminogen activator, urokinase receptor##X51675|PLAUR|5329|plasminogen activator, urokinase receptor##X74039|PLAUR|5329|plasminogen activator, urokinase receptor##BC002788|PLAUR|5329|plasminogen activator, urokinase receptor##NM_001005376|PLAUR|5329|plasminogen activator, urokinase receptor##NM_001005377|PLAUR|5329|plasminogen activator, urokinase receptor##NM_002659|PLAUR|5329|plasminogen activator, urokinase receptor##BC033853|IRGC|56269|immunity-related GTPase family, cinema##NM_019612|IRGC|56269|immunity-related GTPase family, cinema##BC066939|IRGC|56269|immunity-related GTPase family, cinema	0.0	
chr2	234108596	234108735	reg1025241.p1	5.222	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-183549	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-183606	+	BC069151 BC107053 NM_005383	-211284	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	51601	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	51658	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	51692	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.010597	
chr2	31456742	31456909	reg1025956.p1	5.222	+	AK296910 NM_001145122	-16431	-	BC010659 NM_001253826 NM_024572 TSC_hg19_v1_chr2_-_31361621	-95217	-	TSC_hg19_v1_chr2_-_31361366 AK024039	-95459	-	AK316006 NM_014600 TSC_hg19_v1_chr2_+_31456952	96	+	AK294222 TSC_hg19_v1_chr2_+_31456985	158	+	TSC_hg19_v1_chr2_-_31637569 U39487 D11456 U06117	180746	-	AK296910|CAPN14|440854|calpain 14##NM_001145122|CAPN14|440854|calpain 14##BC010659|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253826|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_024572|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##AK316006|EHD3|30845|EH-domain containing 3##NM_014600|EHD3|30845|EH-domain containing 3##AK294222|EHD3|30845|EH-domain containing 3##U39487|XDH|7498|xanthine dehydrogenase##D11456|XDH|7498|xanthine dehydrogenase##U06117|XDH|7498|xanthine dehydrogenase	0.0	
chr5	178946533	178946635	reg1019315.p1	5.222	+	AK308213 NM_014244 NM_021599 TSC_hg19_v1_chr5_-_178772442	-174142	-	AJ003125 AB587330 TSC_hg19_v1_chr5_-_178772362	-174228	-	TSC_hg19_v1_chr5_+_178487382 BC063312 AF525463 NM_014594	-459115	+	TSC_hg19_v1_chr5_+_178977611 AF312367 NM_025158 AF361055	31034	+	TSC_hg19_v1_chr5_+_178977843 AB209507	31258	+	AK291926 NM_001040451 NM_001040452 BC032571 AK075021 TSC_hg19_v1_chr5_+_178986802	40165	+	AK308213|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##NM_014244|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##NM_021599|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##AJ003125|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##BC063312|ZNF354C|30832|zinc finger protein 354C##AF525463|ZNF354C|30832|zinc finger protein 354C##NM_014594|ZNF354C|30832|zinc finger protein 354C##AF312367|RUFY1|80230|RUN and FYVE domain containing 1##NM_025158|RUFY1|80230|RUN and FYVE domain containing 1##AF361055|RUFY1|80230|RUN and FYVE domain containing 1##AB209507|RUFY1|80230|RUN and FYVE domain containing 1##AK291926|RUFY1|80230|RUN and FYVE domain containing 1##NM_001040451|RUFY1|80230|RUN and FYVE domain containing 1##NM_001040452|RUFY1|80230|RUN and FYVE domain containing 1##BC032571|RUFY1|80230|RUN and FYVE domain containing 1##AK075021|RUFY1|80230|RUN and FYVE domain containing 1	0.100035	
chr7	72100371	72100503	reg1026988.p1	5.222	+	NM_031468	-223078	-	NM_001017440 TSC_hg19_v1_chr7_-_71802376	-298133	-	AK123862 TSC_hg19_v1_chr7_-_71801809	-298659	-	AK303225 AK309556 AK301471 BC068520 AK310913 NM_001145440 NM_001145441	198345	-	TSC_hg19_v1_chr7_+_72300065 BC010183	199662	+	TSC_hg19_v1_chr7_+_72349925 AB014518 NM_172020	249498	+	NM_031468|CALN1|83698|calneuron 1##NM_001017440|CALN1|83698|calneuron 1##AK123862|CALN1|83698|calneuron 1##AK303225|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK309556|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK301471|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##BC068520|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK310913|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145440|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145441|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1##AB014518|POM121|9883|POM121 membrane glycoprotein##NM_172020|POM121|9883|POM121 membrane glycoprotein	0.934608	CTCF.p2:4:0.935
chr16	46641545	46641704	reg1027822.p1	5.221	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-13379491	+	AL133588 NM_016212	-13380110	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-13436026	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	13648	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	13682	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	81438	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.608853	CTCF.p2:11:0.609
chr2	227898204	227898364	reg1028459.p1	5.221	+	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	-197554	+	TSC_hg19_v1_chr2_-_227664534 S62539	-233785	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	-234805	-	TSC_hg19_v1_chr2_-_228028922 X81053	130618	-	NM_000092	130990	-	NM_000091 X80031 TSC_hg19_v1_chr2_+_228029337	131026	+	NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1##S62539|IRS1|3667|insulin receptor substrate 1##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##X81053|COL4A4|1286|collagen, type IV, alpha 4##NM_000092|COL4A4|1286|collagen, type IV, alpha 4##NM_000091|COL4A3|1285|collagen, type IV, alpha 3 (Goodpasture antigen)##X80031|COL4A3|1285|collagen, type IV, alpha 3 (Goodpasture antigen)	0.931344	CTCF.p2:-1:0.931
chr3	133646541	133646636	reg1023825.p1	5.221	+	TSC_hg19_v1_chr3_-_133614642 BC078662 AK312378 AF166492 BC002510 NM_016577	-32006	-	AK295451 AF498940 BT007263 AB385529 EU832725 TSC_hg19_v1_chr3_-_133614324	-32278	-	AF086914 TSC_hg19_v1_chr3_+_133524688 AF141882 AK027525 AB464203 CU688042 BC065299	-121907	+	AK025826 AK225383 BC051274 BC064502 BC082257 NM_025041	1998	-	U70867 BC041140 AK303550 AK309561 TSC_hg19_v1_chr3_-_133748770	102162	-	BC051347 TSC_hg19_v1_chr3_-_133748836 NM_005630	102285	-	BC078662|RAB6B|51560|RAB6B, member RAS oncogene family##AK312378|RAB6B|51560|RAB6B, member RAS oncogene family##AF166492|RAB6B|51560|RAB6B, member RAS oncogene family##BC002510|RAB6B|51560|RAB6B, member RAS oncogene family##NM_016577|RAB6B|51560|RAB6B, member RAS oncogene family##AK295451|RAB6B|51560|RAB6B, member RAS oncogene family##AF498940|RAB6B|51560|RAB6B, member RAS oncogene family##BT007263|RAB6B|51560|RAB6B, member RAS oncogene family##EU832725|RAB6B|51560|RAB6B, member RAS oncogene family##AF086914|SRPRB|58477|signal recognition particle receptor, B subunit##AF141882|SRPRB|58477|signal recognition particle receptor, B subunit##AK027525|SRPRB|58477|signal recognition particle receptor, B subunit##BC065299|SRPRB|58477|signal recognition particle receptor, B subunit##AK025826|C3orf36|80111|chromosome 3 open reading frame 36##AK225383|C3orf36|80111|chromosome 3 open reading frame 36##BC051274|C3orf36|80111|chromosome 3 open reading frame 36##BC064502|C3orf36|80111|chromosome 3 open reading frame 36##BC082257|C3orf36|80111|chromosome 3 open reading frame 36##NM_025041|C3orf36|80111|chromosome 3 open reading frame 36##U70867|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##BC041140|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK303550|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK309561|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##BC051347|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##NM_005630|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1	0.999737	CTCF.p2:-10:1.000
chr5	70897129	70897226	reg1023432.p2	5.221	+	AF261884 TSC_hg19_v1_chr5_+_70883182 BC065027 CU688004	-13962	+	TSC_hg19_v1_chr5_+_70883166 AB050049 AF301000 AK310194	-14026	+	AF310971 TSC_hg19_v1_chr5_+_70883132	-14045	+	TSC_hg19_v1_chr5_+_70944968 AK025591	47810	+	NM_004291 BC029882 U16826 CR542216 CU688778 EU831800 EU831877	117877	+	TSC_hg19_v1_chr5_+_71403301 BC017240 NM_005909 BC025240 BC139918 BC150196 BC046114 AK096273 AK308147 BX647077 BC039822 BC108733 BC032516 BC073993 BC056145 BC063669 BC094834 AB463119	506102	+	AF261884|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##BC065027|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AB050049|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AF301000|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AK310194|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AF310971|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##NM_004291|CARTPT|9607|CART prepropeptide##BC029882|CARTPT|9607|CART prepropeptide##U16826|CARTPT|9607|CART prepropeptide##CR542216|CARTPT|9607|CART prepropeptide##EU831800|CARTPT|9607|CART prepropeptide##EU831877|CARTPT|9607|CART prepropeptide##BC017240|MAP1B|4131|microtubule-associated protein 1B##NM_005909|MAP1B|4131|microtubule-associated protein 1B##BC025240|MAP1B|4131|microtubule-associated protein 1B##BC139918|MAP1B|4131|microtubule-associated protein 1B##BC150196|MAP1B|4131|microtubule-associated protein 1B##BC046114|MAP1B|4131|microtubule-associated protein 1B##AK096273|MAP1B|4131|microtubule-associated protein 1B##AK308147|MAP1B|4131|microtubule-associated protein 1B##BX647077|MAP1B|4131|microtubule-associated protein 1B##BC039822|MAP1B|4131|microtubule-associated protein 1B##BC108733|MAP1B|4131|microtubule-associated protein 1B##BC032516|MAP1B|4131|microtubule-associated protein 1B##BC073993|MAP1B|4131|microtubule-associated protein 1B##BC056145|MAP1B|4131|microtubule-associated protein 1B##BC063669|MAP1B|4131|microtubule-associated protein 1B##BC094834|MAP1B|4131|microtubule-associated protein 1B	0.0	
chr11	64611876	64611985	reg1019438.p2	5.220	+	AJ297488 AJ297489 NM_130803 NM_130804	-33165	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	-33736	-	TSC_hg19_v1_chr11_-_64578027 BC002544 AJ297485 AJ297486 NM_130800 NM_130801	-33873	-	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	159	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	34052	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	34224	-	AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I##BC002544|MEN1|4221|multiple endocrine neoplasia I##AJ297485|MEN1|4221|multiple endocrine neoplasia I##AJ297486|MEN1|4221|multiple endocrine neoplasia I##NM_130800|MEN1|4221|multiple endocrine neoplasia I##NM_130801|MEN1|4221|multiple endocrine neoplasia I##AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AY007161|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1	0.0	
chr17	55593166	55593269	reg1026258.p2	5.220	+	AK093888 AX748353 NM_170721	-258844	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-259244	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-430074	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	334187	-	AK000746 NM_017949	387532	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	439459	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.047751	
chr19	15212453	15212573	reg1022990.p1	5.220	+	BC140930 AB529304 NM_001004713	-14680	+	EU502748 AK313992 NM_012114	-52271	+	AK097684 NM_173482 BC035678	-90967	+	TSC_hg19_v1_chr19_+_15218213 AK123686 NM_033025 AK315453 BC029926 CU688794	5678	+	BC126913 CU680024 CU680048 TSC_hg19_v1_chr19_-_15235944	23333	-	BC000109 TSC_hg19_v1_chr19_-_15236004	23475	-	BC140930|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1##NM_001004713|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1##EU502748|CASP14|23581|caspase 14, apoptosis-related cysteine peptidase##AK313992|CASP14|23581|caspase 14, apoptosis-related cysteine peptidase##NM_012114|CASP14|23581|caspase 14, apoptosis-related cysteine peptidase##AK097684|CCDC105|126402|coiled-coil domain containing 105##NM_173482|CCDC105|126402|coiled-coil domain containing 105##BC035678|CCDC105|126402|coiled-coil domain containing 105##AK123686|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)##NM_033025|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)##AK315453|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)##BC029926|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)##BC126913|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC000109|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like	0.838271	CTCF.p2:-29:0.838
chr4	37070335	37070453	reg1028183.p1	5.220	+	BC157885 NM_001170700	-784751	+	AK131492 NM_001136536 AK304357 AK316523	-787148	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	-824357	-	NM_001144990	176295	+	NM_001104629 BC037906	385181	+	AK001879 NM_018302 AK225192	515475	+	BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_001144990|KIAA1239|57495|KIAA1239##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19	0.510995	CTCF.p2:2:0.511
chr5	175788677	175788857	reg1021588.p1	5.220	+	TSC_hg19_v1_chr5_-_175788768 BC006316 BC010448 BC012848 AK024675 AK225073 AK315428 BC017097 AL390217 BX648859 NM_001079684 NM_001079685 NM_020444	-4	-	TSC_hg19_v1_chr5_+_175665384 BC037298 BC066980 NM_198567 AK299336	-123377	+	BC028606 NM_001079529	-276889	+	TSC_hg19_v1_chr5_+_175792493 BC059361 NM_173664 AK096568	3722	+	HQ257929 AY561704 CR457169 NM_016391 BC032424 TSC_hg19_v1_chr5_-_175815607 BC040106 AK303281 AF161460 AK300883 BC019331	26882	-	TSC_hg19_v1_chr5_+_175815751 BC000587 BC007502 NM_138820 DQ891893 DQ895080	27007	+	BC006316|KIAA1191|57179|KIAA1191##BC010448|KIAA1191|57179|KIAA1191##BC012848|KIAA1191|57179|KIAA1191##AK315428|KIAA1191|57179|KIAA1191##BC017097|KIAA1191|57179|KIAA1191##AL390217|KIAA1191|57179|KIAA1191##BX648859|KIAA1191|57179|KIAA1191##NM_001079684|KIAA1191|57179|KIAA1191##NM_001079685|KIAA1191|57179|KIAA1191##NM_020444|KIAA1191|57179|KIAA1191##BC037298|C5orf25|375484|chromosome 5 open reading frame 25##BC066980|C5orf25|375484|chromosome 5 open reading frame 25##NM_198567|C5orf25|375484|chromosome 5 open reading frame 25##AK299336|C5orf25|375484|chromosome 5 open reading frame 25##BC028606|FAM153B|202134|family with sequence similarity 153, member B##NM_001079529|FAM153B|202134|family with sequence similarity 153, member B##BC059361|ARL10|285598|ADP-ribosylation factor-like 10##NM_173664|ARL10|285598|ADP-ribosylation factor-like 10##HQ257929|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##AY561704|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##CR457169|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##NM_016391|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##BC032424|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##BC040106|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##AK303281|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##AF161460|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##AK300883|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##BC019331|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##BC007502|HIGD2A|192286|HIG1 hypoxia inducible domain family, member 2A##NM_138820|HIGD2A|192286|HIG1 hypoxia inducible domain family, member 2A##DQ891893|HIGD2A|192286|HIG1 hypoxia inducible domain family, member 2A##DQ895080|HIGD2A|192286|HIG1 hypoxia inducible domain family, member 2A	0.241331	
chr6	53043927	53044043	reg1027014.p2	5.220	+	BC096288 BC096289 AK309881 NM_003643 D88613	-30382	-	AF176704 NM_012347	-108215	+	TSC_hg19_v1_chr6_+_52930242 AF155114 AL137520 NM_033480	-113664	+	AK125098 TSC_hg19_v1_chr6_-_53213676	169654	-	TSC_hg19_v1_chr6_-_53213736 AB209798 AL136939 BC074503 BC067123	169736	-	AK299674 AK302948 TSC_hg19_v1_chr6_-_53213749 AF338241 NM_001242828 NM_001242830 NM_001242831 NM_021814	169876	-	BC096288|GCM1|8521|glial cells missing homolog 1 (Drosophila)##BC096289|GCM1|8521|glial cells missing homolog 1 (Drosophila)##AK309881|GCM1|8521|glial cells missing homolog 1 (Drosophila)##NM_003643|GCM1|8521|glial cells missing homolog 1 (Drosophila)##D88613|GCM1|8521|glial cells missing homolog 1 (Drosophila)##AF176704|FBXO9|26268|F-box protein 9##NM_012347|FBXO9|26268|F-box protein 9##AL137520|FBXO9|26268|F-box protein 9##NM_033480|FBXO9|26268|F-box protein 9##AK125098|ELOVL5|60481|ELOVL fatty acid elongase 5##AB209798|ELOVL5|60481|ELOVL fatty acid elongase 5##AL136939|ELOVL5|60481|ELOVL fatty acid elongase 5##BC074503|ELOVL5|60481|ELOVL fatty acid elongase 5##BC067123|ELOVL5|60481|ELOVL fatty acid elongase 5##AK299674|ELOVL5|60481|ELOVL fatty acid elongase 5##AK302948|ELOVL5|60481|ELOVL fatty acid elongase 5##AF338241|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242828|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242830|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242831|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_021814|ELOVL5|60481|ELOVL fatty acid elongase 5	0.0	
chr8	55051881	55051985	reg1023630.p1	5.220	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-4122	+	TSC_hg19_v1_chr8_-_55014465 CR457103 CU679013 DQ891527 DQ894717 BC010397 AF077198 AF077199 AF291053 AK307277 AK313739 AF081281 AK298206 AK289400 BC008652 AF052112 NM_006330	-37435	-	TSC_hg19_v1_chr8_-_54934990 NM_006756 NM_201437	-116914	-	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	318583	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	476719	+	BC106028 AY534241 NM_052898	963081	+	BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##CR457103|LYPLA1|10434|lysophospholipase I##DQ891527|LYPLA1|10434|lysophospholipase I##DQ894717|LYPLA1|10434|lysophospholipase I##BC010397|LYPLA1|10434|lysophospholipase I##AF077198|LYPLA1|10434|lysophospholipase I##AF077199|LYPLA1|10434|lysophospholipase I##AF291053|LYPLA1|10434|lysophospholipase I##AK307277|LYPLA1|10434|lysophospholipase I##AK313739|LYPLA1|10434|lysophospholipase I##AF081281|LYPLA1|10434|lysophospholipase I##AK298206|LYPLA1|10434|lysophospholipase I##AK289400|LYPLA1|10434|lysophospholipase I##BC008652|LYPLA1|10434|lysophospholipase I##AF052112|LYPLA1|10434|lysophospholipase I##NM_006330|LYPLA1|10434|lysophospholipase I##NM_006756|TCEA1|6917|transcription elongation factor A (SII), 1##NM_201437|TCEA1|6917|transcription elongation factor A (SII), 1##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4	0.996453	CTCF.p2:-3:0.996
chr4	152533827	152533966	reg1035138.p1	5.219	+	TSC_hg19_v1_chr4_+_152330327 NM_001109977	-203535	+	BC121109 BC121110 NM_183375	-335572	+	TSC_hg19_v1_chr4_-_152149045 AK294476 NM_001243349	-384785	-	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	148245	-	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	740000	-	NM_001013415 AY008274	769768	-	NM_001109977|FAM160A1|729830|family with sequence similarity 160, member A1##BC121109|PRSS48|345062|protease, serine, 48##BC121110|PRSS48|345062|protease, serine, 48##NM_183375|PRSS48|345062|protease, serine, 48##AK294476|SH3D19|152503|SH3 domain containing 19##NM_001243349|SH3D19|152503|SH3 domain containing 19##AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7	0.98731	CTCF.p2:5:0.987
chr14	32729000	32729124	reg1026968.p2	5.218	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-182556	+	TSC_hg19_v1_chr14_+_32546223 BC075799	-182817	+	TSC_hg19_v1_chr14_+_32546174 BC050059	-182883	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	69474	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	679428	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	1691087	-	NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##BC050059|ARHGAP5|394|Rho GTPase activating protein 5##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)	0.0	
chr16	11391503	11391669	reg1026023.p1	5.218	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-16444	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	-21266	-	NM_021247	-24135	-	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	47708	+	TSC_hg19_v1_chr16_+_11439315 BC013040	47732	+	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	288601	-	BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2##NM_021247|PRM3|58531|protamine 3##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor	0.0	
chr17	36665712	36665841	reg1029965.p1	5.218	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	-81071	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	-157913	+	AY584611 NM_001004334	-166084	-	TSC_hg19_v1_chr17_-_36729122 AK295027	63346	-	BC029278 TSC_hg19_v1_chr17_-_36760969	95162	-	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	96420	-	NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1	0.016145	
chr5	90515711	90515840	reg1026406.p1	5.218	+	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	-661161	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-690409	-	NM_006467 AK295434 U93868	-745073	+	AK091866 TSC_hg19_v1_chr5_-_90610220	94470	-	TSC_hg19_v1_chr5_+_90676181 BC043415	160387	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	163357	-	AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3	0.996932	CTCF.p2:18:0.997
chr7	30114201	30114300	reg1025854.p1	5.218	+	TSC_hg19_v1_chr7_+_30068250 BC002838 AF308300 AF380162 DQ893498 DQ896458 CU678236	-45959	+	TSC_hg19_v1_chr7_+_30068010 NM_001197026 NM_001197027 NM_032639 AK294857 BC053990 AK023180	-46249	+	CU675039 DQ892525 DQ895737 TSC_hg19_v1_chr7_-_30066286 AK000738 NM_017946 AK309552 AY358643 BC005206	-48029	-	TSC_hg19_v1_chr7_+_30174621 NM_152793 AK096533 AL834391 AK098769 AB528783 AK294982	60332	+	AF513707 NM_147128	209672	+	TSC_hg19_v1_chr7_+_30324515 AF527533	210299	+	BC002838|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF308300|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF380162|PLEKHA8P1|51054|pleckstrin homology domain containing, family A member 8 pseudogene 1##DQ893498|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##DQ896458|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197026|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197027|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_032639|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK294857|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##BC053990|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK023180|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##DQ892525|FKBP14|55033|FK506 binding protein 14, 22 kDa##DQ895737|FKBP14|55033|FK506 binding protein 14, 22 kDa##AK000738|FKBP14|55033|FK506 binding protein 14, 22 kDa##NM_017946|FKBP14|55033|FK506 binding protein 14, 22 kDa##AK309552|FKBP14|55033|FK506 binding protein 14, 22 kDa##AY358643|FKBP14|55033|FK506 binding protein 14, 22 kDa##BC005206|FKBP14|55033|FK506 binding protein 14, 22 kDa##NM_152793|C7orf41|222166|chromosome 7 open reading frame 41##AK096533|C7orf41|222166|chromosome 7 open reading frame 41##AL834391|C7orf41|222166|chromosome 7 open reading frame 41##AK098769|C7orf41|222166|chromosome 7 open reading frame 41##AK294982|C7orf41|222166|chromosome 7 open reading frame 41##AF513707|ZNRF2|223082|zinc and ring finger 2##NM_147128|ZNRF2|223082|zinc and ring finger 2##AF527533|ZNRF2|223082|zinc and ring finger 2	0.804232	CTCF.p2:-2:0.804
chr7	69371325	69371489	reg1024065.p1	5.218	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-306819	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-307078	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-307571	+	TSC_hg19_v1_chr7_+_70231164 AK296981	859798	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1226381	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2430371	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.0	
chr10	6337625	6337805	reg1023768.p1	5.217	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-92839	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-150803	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-150831	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	284546	-	TSC_hg19_v1_chr10_+_6622460 AY007155	284765	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	1113535	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.0	
chr1	236117997	236118111	reg1024578.p1	5.217	+	NM_000081 U67615 TSC_hg19_v1_chr1_-_236030233	-87810	-	TSC_hg19_v1_chr1_-_236030193 BC020793	-87871	-	BC022485 NM_001098721 NM_004485	-304001	-	TSC_hg19_v1_chr1_-_236228375 AB209448 CU692272	110323	-	TSC_hg19_v1_chr1_-_236228393 BC045606 M30269	110371	-	TSC_hg19_v1_chr1_-_236228477 NM_002508	110424	-	NM_000081|LYST|1130|lysosomal trafficking regulator##U67615|LYST|1130|lysosomal trafficking regulator##BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##AB209448|NID1|4811|nidogen 1##BC045606|NID1|4811|nidogen 1##M30269|NID1|4811|nidogen 1##NM_002508|NID1|4811|nidogen 1	0.055134	
chr6	42478691	42478815	reg1029949.p1	5.216	+	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	-58930	-	TSC_hg19_v1_chr6_-_42185603 NM_018141	-293136	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-293153	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	52997	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	53024	+	TSC_hg19_v1_chr6_+_42531956 AY061884 CU687884	53251	+	AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.998326	CTCF.p2:9:0.998
chr11	109963391	109963550	reg1022673.p1	5.215	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-670571	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-670627	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-1427656	+	AK095101 TSC_hg19_v1_chr11_+_109963524	58	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	660	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	203843	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.0	
chr19	28503411	28503524	reg1026237.p2	5.215	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-218539	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-218634	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-219079	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	1200593	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	1200654	-	NM_001146339	1514023	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.0	
chr22	25456700	25456835	reg1026295.p1	5.215	+	BC171801 NM_001145206	-32827	+	BC130647 BC130649 CR456388 NM_001001663	-121455	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-254557	+	TSC_hg19_v1_chr22_+_25591072 AK025418	134362	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	139077	+	NM_000496	158844	+	BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AK025418|KIAA1671|85379|KIAA1671##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##NM_000496|CRYBB2|1415|crystallin, beta B2	0.978756	CTCF.p2:-4:0.979
chr3	71446315	71446411	reg1023480.p1	5.215	+	AK092383 AX747510 NM_001244812	-92453	-	TSC_hg19_v1_chr3_-_71294229 AK074321 NM_001244814	-152091	-	TSC_hg19_v1_chr3_-_71180072 NM_001244815	-266284	-	TSC_hg19_v1_chr3_-_71542628 AF146696 BC054505	96304	-	AF250920 NM_001244816	146344	-	TSC_hg19_v1_chr3_-_71632874 AK122710 NM_001244808 BC005055 BC054815 BC071893 BC080521 BC068481 NM_001012505 NM_001244810 NM_032682	186615	-	AK092383|FOXP1|27086|forkhead box P1##NM_001244812|FOXP1|27086|forkhead box P1##AK074321|FOXP1|27086|forkhead box P1##NM_001244814|FOXP1|27086|forkhead box P1##NM_001244815|FOXP1|27086|forkhead box P1##AF146696|FOXP1|27086|forkhead box P1##BC054505|FOXP1|27086|forkhead box P1##AF250920|FOXP1|27086|forkhead box P1##NM_001244816|FOXP1|27086|forkhead box P1##AK122710|FOXP1|27086|forkhead box P1##NM_001244808|FOXP1|27086|forkhead box P1##BC005055|FOXP1|27086|forkhead box P1##BC054815|FOXP1|27086|forkhead box P1##BC071893|FOXP1|27086|forkhead box P1##BC080521|FOXP1|27086|forkhead box P1##BC068481|FOXP1|27086|forkhead box P1##NM_001012505|FOXP1|27086|forkhead box P1##NM_001244810|FOXP1|27086|forkhead box P1##NM_032682|FOXP1|27086|forkhead box P1	0.0	
chr8	126346367	126346547	reg1025588.p1	5.215	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-242360	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-242400	-	TSC_hg19_v1_chr8_-_126104024 AK296970	-242435	-	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	96122	+	TSC_hg19_v1_chr8_-_126963395 BX648371	616956	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	1224098	-	NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##AK296970|KIAA0196|9897|KIAA0196##BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B	0.018201	
chr16	11600777	11600958	reg1026327.p1	5.214	+	TSC_hg19_v1_chr16_+_11439315 BC013040	-161549	+	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	-161573	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-225725	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	79320	-	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	79922	-	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	161431	+	BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin	0.046858	
chr2	119296999	119297150	reg1029435.p1	5.214	+	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-451011	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-525341	-	TSC_hg19_v1_chr2_-_118771677 BC028609	-525390	-	NM_001426	308684	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	402746	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	619330	-	AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC028609|CCDC93|54520|coiled-coil domain containing 93##NM_001426|EN1|2019|engrailed homeobox 1##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2	0.964428	CTCF.p2:15:0.964
chr2	238924393	238924524	reg1031822.p1	5.214	+	TSC_hg19_v1_chr2_+_238875689 BC010549 AK294107	-48755	+	TSC_hg19_v1_chr2_+_238875673 AK290063	-48778	+	NM_080678 TSC_hg19_v1_chr2_+_238875655 AK002119 AK293334 AK297502 AK303094	-48834	+	AB209458 NM_016510 TSC_hg19_v1_chr2_+_238969639	45143	+	TSC_hg19_v1_chr2_+_238969669 AK301009 BC007891 AF175767 AK298409 DQ893234 DQ896564 CU675851	45222	+	TSC_hg19_v1_chr2_+_238969747 BC000586 AK293283	45309	+	BC010549|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK294107|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK290063|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##NM_080678|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK293334|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK297502|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK303094|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AB209458|SCLY|51540|selenocysteine lyase##NM_016510|SCLY|51540|selenocysteine lyase##AK301009|SCLY|51540|selenocysteine lyase##BC007891|SCLY|51540|selenocysteine lyase##AF175767|SCLY|51540|selenocysteine lyase##AK298409|SCLY|51540|selenocysteine lyase##DQ893234|SCLY|51540|selenocysteine lyase##DQ896564|SCLY|51540|selenocysteine lyase##BC000586|SCLY|51540|selenocysteine lyase##AK293283|SCLY|51540|selenocysteine lyase	0.992347	CTCF.p2:9:0.992
chr2	74346604	74346723	reg1027139.p1	5.214	+	NM_144993	-73214	+	TSC_hg19_v1_chr2_+_74154019 X97386	-192617	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-192663	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	28355	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	28557	+	AL122062 TSC_hg19_v1_chr2_-_74382411	35718	-	NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.091526	
chr9	139839244	139839424	reg1022885.p2	5.214	+	BC014130 TSC_hg19_v1_chr9_-_139839140 BC035355 BC031100 NM_018998	-198	-	BC014297 TSC_hg19_v1_chr9_-_139839082 AK315738	-250	-	TSC_hg19_v1_chr9_-_139839068 AK026081	-266	-	NM_000606 M17999 X06465 BC113624 BC113626 M17263 HQ258743 AB590759	399	+	BC041168 NM_178536 AY301272	7439	+	TSC_hg19_v1_chr9_+_139871955 NM_000954 AK075333 M61900 AK312817	32627	+	BC014130|FBXW5|54461|F-box and WD repeat domain containing 5##BC035355|FBXW5|54461|F-box and WD repeat domain containing 5##BC031100|FBXW5|54461|F-box and WD repeat domain containing 5##NM_018998|FBXW5|54461|F-box and WD repeat domain containing 5##BC014297|FBXW5|54461|F-box and WD repeat domain containing 5##AK315738|FBXW5|54461|F-box and WD repeat domain containing 5##AK026081|FBXW5|54461|F-box and WD repeat domain containing 5##NM_000606|C8G|733|complement component 8, gamma polypeptide##M17999|C8G|733|complement component 8, gamma polypeptide##X06465|C8G|733|complement component 8, gamma polypeptide##BC113624|C8G|733|complement component 8, gamma polypeptide##BC113626|C8G|733|complement component 8, gamma polypeptide##M17263|C8G|733|complement component 8, gamma polypeptide##HQ258743|C8G|733|complement component 8, gamma polypeptide##BC041168|LCN12|286256|lipocalin 12##NM_178536|LCN12|286256|lipocalin 12##AY301272|LCN12|286256|lipocalin 12##NM_000954|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##AK075333|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##M61900|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##AK312817|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)	0.388354	CTCF.p2:-7:0.388
chr1	15131274	15131383	reg1024855.p1	5.213	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	-206134	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-1055387	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-1055405	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	119391	+	AY505121 NM_001018001	124967	+	AY505122 NM_001017999	141086	+	AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein	0.033194	
chr1	2160655	2160835	reg1025413.p1	5.213	+	NM_003036 X15218 TSC_hg19_v1_chr1_+_2160159	-576	+	AK127994 NM_001146310	-21574	-	TSC_hg19_v1_chr1_-_2126212 BC041041 AF469129 BC066360 AK055593 BC103992 NM_182533	-34566	-	TSC_hg19_v1_chr1_-_2322994 AK024003 NM_024848	162247	-	TSC_hg19_v1_chr1_-_2322997 AK299217 AK310323 BC021704	162325	-	TSC_hg19_v1_chr1_+_2323265 NM_007033 AF157324	162490	+	NM_003036|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##X15218|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##AK127994|C1orf86|199990|chromosome 1 open reading frame 86##NM_001146310|C1orf86|199990|chromosome 1 open reading frame 86##BC041041|C1orf86|199990|chromosome 1 open reading frame 86##AF469129|C1orf86|199990|chromosome 1 open reading frame 86##BC066360|C1orf86|199990|chromosome 1 open reading frame 86##AK055593|C1orf86|199990|chromosome 1 open reading frame 86##BC103992|C1orf86|199990|chromosome 1 open reading frame 86##NM_182533|C1orf86|199990|chromosome 1 open reading frame 86##AK024003|MORN1|79906|MORN repeat containing 1##NM_024848|MORN1|79906|MORN repeat containing 1##AK299217|MORN1|79906|MORN repeat containing 1##AK310323|MORN1|79906|MORN repeat containing 1##BC021704|MORN1|79906|MORN repeat containing 1##NM_007033|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##AF157324|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)	0.0	
chr14	29692014	29692111	reg1024664.p1	5.213	+	TSC_hg19_v1_chr14_+_29241992 BX248251	-450067	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-455149	+	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	-455834	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	704792	-	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	1336298	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	1399462	+	BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1	0.089938	
chr5	6502015	6502121	reg1025963.p2	5.213	+	TSC_hg19_v1_chr5_+_6449114 AK057805	-52879	+	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	-53215	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	-123418	-	TSC_hg19_v1_chr5_-_6633158 AK291144 BC137083 AK298980	131086	-	TSC_hg19_v1_chr5_-_6633411 AK055456 AB255451 NM_001193455 NM_017755	131341	-	NM_001047 TSC_hg19_v1_chr5_+_6633508	131442	+	AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##AK291144|NSUN2|54888|NOP2/Sun domain family, member 2##BC137083|NSUN2|54888|NOP2/Sun domain family, member 2##AK298980|NSUN2|54888|NOP2/Sun domain family, member 2##AK055456|NSUN2|54888|NOP2/Sun domain family, member 2##AB255451|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001193455|NSUN2|54888|NOP2/Sun domain family, member 2##NM_017755|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001047|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)	0.732953	CTCF.p2:-15:0.733
chr7	70181568	70181708	reg1023936.p1	5.213	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-1117050	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-1117309	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-1117802	+	TSC_hg19_v1_chr7_+_70231164 AK296981	49567	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	416150	+	AK123862 TSC_hg19_v1_chr7_-_71801809	1620140	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.0	
chr15	101450425	101450562	reg1030149.p2	5.212	+	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-30422	+	TSC_hg19_v1_chr15_+_101420006 NM_000693	-30487	+	TSC_hg19_v1_chr15_+_101390032 AK056534	-60460	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	8981	-	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	9019	+	AB071402 TSC_hg19_v1_chr15_-_101791795	341243	-	AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##NM_000693|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK056534|LOC145757|145757|uncharacterized LOC145757##NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AB071402|CHSY1|22856|chondroitin sulfate synthase 1	0.959185	CTCF.p2:24:0.959
chr22	24529279	24529394	reg1029053.p1	5.212	+	TSC_hg19_v1_chr22_+_24407870 AB002328 BC041659	-121441	+	TSC_hg19_v1_chr22_+_24407863 NM_001199281 BC013099 BC028969	-121496	+	TSC_hg19_v1_chr22_+_24407753 AF072441 NM_001201429 NM_012295 AK307522 BC054497	-121561	+	TSC_hg19_v1_chr22_+_24551954 AL390166	22621	+	TSC_hg19_v1_chr22_+_24577424 AK026431	48091	+	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	48108	+	AB002328|CABIN1|23523|calcineurin binding protein 1##BC041659|CABIN1|23523|calcineurin binding protein 1##NM_001199281|CABIN1|23523|calcineurin binding protein 1##BC013099|CABIN1|23523|calcineurin binding protein 1##BC028969|CABIN1|23523|calcineurin binding protein 1##AF072441|CABIN1|23523|calcineurin binding protein 1##NM_001201429|CABIN1|23523|calcineurin binding protein 1##NM_012295|CABIN1|23523|calcineurin binding protein 1##AK307522|CABIN1|23523|calcineurin binding protein 1##BC054497|CABIN1|23523|calcineurin binding protein 1##AL390166|CABIN1|23523|calcineurin binding protein 1##AK026431|SUSD2|56241|sushi domain containing 2##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2	0.900478	CTCF.p2:-2:0.900
chr3	86612639	86612777	reg1026739.p1	5.212	+	AF538973 NM_153184	-837077	+	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	-1604579	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-4577406	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	427543	-	BC094780 TSC_hg19_v1_chr3_-_87040272	427562	-	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	663827	+	AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B	0.996414	CTCF.p2:1:0.996
chr9	137673854	137674001	reg1024731.p1	5.212	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	-140117	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	-140280	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-455527	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	98733	+	D83920 DQ891426 DQ894436 CR749452 BC020635 AK314867 NM_002003	135830	-	NM_014279 NM_006334 TSC_hg19_v1_chr9_+_137967133	293188	+	D90279|COL5A1|1289|collagen, type V, alpha 1##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D83920|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ891426|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ894436|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##CR749452|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##BC020635|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##AK314867|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_002003|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_014279|OLFM1|10439|olfactomedin 1##NM_006334|OLFM1|10439|olfactomedin 1	1.83914	CTCF.p2:8:0.998	CTCF.p2:-69:0.842
chr17	55479581	55479712	reg1027559.p1	5.211	+	AK093888 AX748353 NM_170721	-145273	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-145673	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-316503	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	447758	-	AK000746 NM_017949	501103	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	553030	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.514838	CTCF.p2:3:0.515
chr5	426007	426108	reg1027667.p1	5.211	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-121767	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-154252	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-154289	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	17173	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	17293	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	47055	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.0	
chr9	44172295	44172424	reg1028429.p1	5.211	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-487516	+	NM_001145196	-541630	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-1038872	-	TSC_hg19_v1_chr9_+_45441926 BC006438	1269567	+	BC040528 NM_001113541 NM_015667	21337250	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	22284942	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.991931	CTCF.p2:-7:0.992
chr10	86503394	86503485	reg1025378.p1	5.210	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-318744	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-371821	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-415045	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	1622824	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	1778055	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	1778091	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.970055	CTCF.p2:1:0.970
chr1	152505924	152506041	reg1028317.p1	5.210	+	AJ243662 NM_019060	-19005	+	NM_178438	-22663	+	AF077831 AK291301 AK298640 AK316568 BC030807 NM_016190	-119244	-	BC131716 NM_178435	33255	-	BC101784 BC069291 AB048288 NM_032563	46988	-	BC130365 BC130367 NM_178434 HQ258028	67190	+	AJ243662|CRCT1|54544|cysteine-rich C-terminal 1##NM_019060|CRCT1|54544|cysteine-rich C-terminal 1##NM_178438|LCE5A|254910|late cornified envelope 5A##AF077831|CRNN|49860|cornulin##AK291301|CRNN|49860|cornulin##AK298640|CRNN|49860|cornulin##AK316568|CRNN|49860|cornulin##BC030807|CRNN|49860|cornulin##NM_016190|CRNN|49860|cornulin##BC131716|LCE3E|353145|late cornified envelope 3E##NM_178435|LCE3E|353145|late cornified envelope 3E##BC101784|LCE3D|84648|late cornified envelope 3D##BC069291|LCE3D|84648|late cornified envelope 3D##AB048288|LCE3D|84648|late cornified envelope 3D##NM_032563|LCE3D|84648|late cornified envelope 3D##BC130365|LCE3C|353144|late cornified envelope 3C##BC130367|LCE3C|353144|late cornified envelope 3C##NM_178434|LCE3C|353144|late cornified envelope 3C##HQ258028|LCE3C|353144|late cornified envelope 3C	0.787044	CTCF.p2:18:0.787
chr12	118109578	118109693	reg1026553.p2	5.210	+	AK294435 AF446135 EU753241 U17327 AK307481 NM_000620 NM_001204218	-310127	-	AF446136 TSC_hg19_v1_chr12_-_117799037	-310614	-	NM_001204214	-362421	-	NM_173598	296392	-	NM_001130112 NM_001206801 NM_007370 NM_181578 TSC_hg19_v1_chr12_+_118454507 AK291107 AK094575 AK290685 BC001866 BC013961 AB208992 BC020440 L07540 AB464140 CU674898 CR407651	344933	+	AK310892 TSC_hg19_v1_chr12_-_118498977 BC015887 AK298513 AF229181 NM_018639	389300	-	AK294435|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446135|NOS1|4842|nitric oxide synthase 1 (neuronal)##EU753241|NOS1|4842|nitric oxide synthase 1 (neuronal)##U17327|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK307481|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_000620|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204218|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446136|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_173598|KSR2|283455|kinase suppressor of ras 2##NM_001130112|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_001206801|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_007370|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_181578|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK291107|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK094575|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK290685|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC001866|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC013961|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AB208992|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC020440|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##L07540|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##CR407651|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK310892|WSB2|55884|WD repeat and SOCS box containing 2##BC015887|WSB2|55884|WD repeat and SOCS box containing 2##AK298513|WSB2|55884|WD repeat and SOCS box containing 2##AF229181|WSB2|55884|WD repeat and SOCS box containing 2##NM_018639|WSB2|55884|WD repeat and SOCS box containing 2	0.999601	CTCF.p2:12:1.000
chr2	10808659	10808793	reg1028559.p2	5.210	+	TSC_hg19_v1_chr2_-_10588453 AK301956 NM_002539	-220274	-	D28365 BC014562 BC025296 X55362 TSC_hg19_v1_chr2_-_10588440	-220366	-	AK000596 NM_134421	-364901	+	CU675005 TSC_hg19_v1_chr2_-_10830078 AK290680 AK024000 BC005125 AK024137 AK297169 AK299617	21318	-	TSC_hg19_v1_chr2_-_10830102 NM_024894	21393	-	TSC_hg19_v1_chr2_+_10861755 NM_001039362 NM_144583 AK292952	53049	+	AK301956|ODC1|4953|ornithine decarboxylase 1##NM_002539|ODC1|4953|ornithine decarboxylase 1##D28365|ODC1|4953|ornithine decarboxylase 1##BC014562|ODC1|4953|ornithine decarboxylase 1##BC025296|ODC1|4953|ornithine decarboxylase 1##X55362|ODC1|4953|ornithine decarboxylase 1##AK000596|HPCAL1|3241|hippocalcin-like 1##NM_134421|HPCAL1|3241|hippocalcin-like 1##AK290680|NOL10|79954|nucleolar protein 10##AK024000|NOL10|79954|nucleolar protein 10##BC005125|NOL10|79954|nucleolar protein 10##AK024137|NOL10|79954|nucleolar protein 10##AK297169|NOL10|79954|nucleolar protein 10##AK299617|NOL10|79954|nucleolar protein 10##NM_024894|NOL10|79954|nucleolar protein 10##NM_001039362|ATP6V1C2|245973|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2##NM_144583|ATP6V1C2|245973|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2##AK292952|ATP6V1C2|245973|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2	0.951605	CTCF.p2:14:0.952
chr5	132143158	132143293	reg1025027.p1	5.210	+	AF440763 NM_001098813 TSC_hg19_v1_chr5_-_132113705	-29638	-	TSC_hg19_v1_chr5_-_132112954 BC140759 BC171779 AK057797 AF179995 AF440761 AF440762 D86957 NM_001098811 NM_001098812 NM_015146	-30221	-	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	-60081	+	TSC_hg19_v1_chr5_+_132149022 NM_175873	5802	+	BC104914 BC104916 BC143494 AF314142 NM_133456	18707	-	DQ655971 TSC_hg19_v1_chr5_-_132166340 BC040980	23079	-	AF440763|SEPT8|23176|septin 8##NM_001098813|SEPT8|23176|septin 8##BC140759|SEPT8|23176|septin 8##BC171779|SEPT8|23176|septin 8##AK057797|SEPT8|23176|septin 8##AF179995|SEPT8|23176|septin 8##AF440761|SEPT8|23176|septin 8##AF440762|SEPT8|23176|septin 8##D86957|SEPT8|23176|septin 8##NM_001098811|SEPT8|23176|septin 8##NM_001098812|SEPT8|23176|septin 8##NM_015146|SEPT8|23176|septin 8##AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2##NM_175873|ANKRD43|134548|ankyrin repeat domain 43##BC104914|SHROOM1|134549|shroom family member 1##BC104916|SHROOM1|134549|shroom family member 1##BC143494|SHROOM1|134549|shroom family member 1##AF314142|SHROOM1|134549|shroom family member 1##NM_133456|SHROOM1|134549|shroom family member 1	0.954924	CTCF.p2:35:0.955
chr5	89481273	89481387	reg1024407.p2	5.210	+	AL833268 AL833274 NM_001131005 NM_001193347	-1281436	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1296066	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-1296210	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	224209	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	288852	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	289248	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.697389	CTCF.p2:18:0.697
chr8	27182116	27182194	reg1000967.p4	5.210	+	NM_004103 D45853 U43522	-2232	+	TSC_hg19_v1_chr8_+_27169015 BC036651 NM_173174	-13154	+	TSC_hg19_v1_chr8_-_27168793 AB029021 AF492463 BC018337 NM_171982	-13347	-	NM_173176 TSC_hg19_v1_chr8_+_27183022	862	+	TSC_hg19_v1_chr8_+_27183049 BC042599	897	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	922	+	NM_004103|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##D45853|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##U43522|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC036651|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173174|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB029021|TRIM35|23087|tripartite motif containing 35##AF492463|TRIM35|23087|tripartite motif containing 35##BC018337|TRIM35|23087|tripartite motif containing 35##NM_171982|TRIM35|23087|tripartite motif containing 35##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta	0.79846	CTCF.p2:-37:0.798
chr10	88109383	88109495	reg1027547.p1	5.209	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-1924744	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-1977821	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-2021045	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	16824	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	172055	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	172091	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.39582	CTCF.p2:-24:0.338
chr11	60712432	60712539	reg1028517.p2	5.209	+	TSC_hg19_v1_chr11_+_60691945 NM_017870 NM_178031 AK000546 BC114569 BC032059	-20550	+	TSC_hg19_v1_chr11_+_60681647 AX775851 BC001309 AX775849	-30817	+	NM_024092 AK303961 TSC_hg19_v1_chr11_+_60681578 AK313913	-31006	+	BC037974 BC025710 AF135600 AB020598 NM_016582	6701	-	NM_006725 TSC_hg19_v1_chr11_+_60739236 AK128419 AK312749 BC078669 BC033755 X60992 AK292704 DQ786329 DQ786330 U66142 U66145 U66146	26740	+	NM_014207 AY541703 TSC_hg19_v1_chr11_+_60869960 AK292698 X04391 BC027901 DQ892077 DQ895270	157494	+	NM_017870|TMEM132A|54972|transmembrane protein 132A##NM_178031|TMEM132A|54972|transmembrane protein 132A##AK000546|TMEM132A|54972|transmembrane protein 132A##BC114569|TMEM132A|54972|transmembrane protein 132A##BC032059|TMEM132A|54972|transmembrane protein 132A##AX775851|TMEM109|79073|transmembrane protein 109##BC001309|TMEM109|79073|transmembrane protein 109##AX775849|TMEM109|79073|transmembrane protein 109##NM_024092|TMEM109|79073|transmembrane protein 109##AK303961|TMEM109|79073|transmembrane protein 109##AK313913|TMEM109|79073|transmembrane protein 109##BC037974|SLC15A3|51296|solute carrier family 15, member 3##BC025710|SLC15A3|51296|solute carrier family 15, member 3##AF135600|SLC15A3|51296|solute carrier family 15, member 3##AB020598|SLC15A3|51296|solute carrier family 15, member 3##NM_016582|SLC15A3|51296|solute carrier family 15, member 3##NM_006725|CD6|923|CD6 molecule##AK128419|CD6|923|CD6 molecule##AK312749|CD6|923|CD6 molecule##BC078669|CD6|923|CD6 molecule##BC033755|CD6|923|CD6 molecule##X60992|CD6|923|CD6 molecule##AK292704|CD6|923|CD6 molecule##DQ786329|CD6|923|CD6 molecule##DQ786330|CD6|923|CD6 molecule##U66142|CD6|923|CD6 molecule##U66145|CD6|923|CD6 molecule##U66146|CD6|923|CD6 molecule##NM_014207|CD5|921|CD5 molecule##AY541703|CD5|921|CD5 molecule##AK292698|CD5|921|CD5 molecule##X04391|CD5|921|CD5 molecule##BC027901|CD5|921|CD5 molecule##DQ892077|CD5|921|CD5 molecule##DQ895270|CD5|921|CD5 molecule	0.067987	
chr17	37427376	37427473	reg1027609.p1	5.209	+	BC109231 AJ608762 AK131500 NM_198993	-45445	-	TSC_hg19_v1_chr17_+_37356579 BC000530 S56985 BC013016	-70843	+	TSC_hg19_v1_chr17_+_37356573 AK223082 BC062709 BX537435	-70852	+	TSC_hg19_v1_chr17_-_37557855 BC007557 DQ223959 AK312612 AK291844 AK123048 NM_001184906 NM_032875	130476	-	CU687400 BC131783 AF055994 BC006517 Y13467 BC060758 TSC_hg19_v1_chr17_-_37607519 AK299789 AK314185 NM_004774	179997	-	TSC_hg19_v1_chr17_+_37617760 NM_015083 NM_016507 AK302645	190328	+	BC109231|STAC2|342667|SH3 and cysteine rich domain 2##AJ608762|STAC2|342667|SH3 and cysteine rich domain 2##AK131500|STAC2|342667|SH3 and cysteine rich domain 2##NM_198993|STAC2|342667|SH3 and cysteine rich domain 2##BC000530|RPL19|6143|ribosomal protein L19##S56985|RPL19|6143|ribosomal protein L19##BC013016|RPL19|6143|ribosomal protein L19##AK223082|RPL19|6143|ribosomal protein L19##BC062709|RPL19|6143|ribosomal protein L19##BX537435|RPL19|6143|ribosomal protein L19##BC007557|FBXL20|84961|F-box and leucine-rich repeat protein 20##DQ223959|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK312612|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK291844|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK123048|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_001184906|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_032875|FBXL20|84961|F-box and leucine-rich repeat protein 20##BC131783|MED1|5469|mediator complex subunit 1##AF055994|MED1|5469|mediator complex subunit 1##BC006517|MED1|5469|mediator complex subunit 1##Y13467|MED1|5469|mediator complex subunit 1##BC060758|MED1|5469|mediator complex subunit 1##AK299789|MED1|5469|mediator complex subunit 1##AK314185|MED1|5469|mediator complex subunit 1##NM_004774|MED1|5469|mediator complex subunit 1##NM_015083|CDK12|51755|cyclin-dependent kinase 12##NM_016507|CDK12|51755|cyclin-dependent kinase 12##AK302645|CDK12|51755|cyclin-dependent kinase 12	0.923438	CTCF.p2:6:0.923
chr5	58802367	58802484	reg1008814.p2	5.209	+	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	-149682	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	-230495	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	-467047	-	U50159 NM_006203 L20970	79874	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	261923	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	262030	-	AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.0	
chr6	73353075	73353212	reg1027933.p1	5.209	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	-21082	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	-21254	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	-21573	+	BC004267 NM_001126063	582031	-	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	619723	-	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	619830	+	AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC004267|KHDC1L|100129128|KH homology domain containing 1-like##NM_001126063|KHDC1L|100129128|KH homology domain containing 1-like##BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1	0.0	
chr8	28269536	28269705	reg1027080.p1	5.209	+	AK002050 AK023418 NM_018660 AB057659 AB073627	-25659	-	BC001237 TSC_hg19_v1_chr8_-_28243694	-25978	-	NM_006228 U48263 TSC_hg19_v1_chr8_+_28174784 AK289633 AY335948 BC034758	-94895	+	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	78159	-	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	82145	+	TSC_hg19_v1_chr8_+_28559032 AB011091	289455	+	AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##BC001237|ZNF395|55893|zinc finger protein 395##NM_006228|PNOC|5368|prepronociceptin##U48263|PNOC|5368|prepronociceptin##AK289633|PNOC|5368|prepronociceptin##AY335948|PNOC|5368|prepronociceptin##BC034758|PNOC|5368|prepronociceptin##BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16##NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##AB011091|EXTL3|2137|exostoses (multiple)-like 3	0.021563	
chr1	154378337	154378442	reg1023806.p3	5.208	+	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	-315	+	AK223582 BC132684 BC132686 TSC_hg19_v1_chr1_+_154377856	-537	+	NM_000565 NM_001206866 NM_181359 X12830 BC089410 TSC_hg19_v1_chr1_+_154377822	-639	+	BC143765 BC117210 NM_001010846	96135	-	BC044864 NM_001098475 NM_182499	96305	+	BC107057 AY112698 TSC_hg19_v1_chr1_-_154531132 AY948200 NM_017582	152720	-	AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor##AK223582|IL6R|3570|interleukin 6 receptor##BC132684|IL6R|3570|interleukin 6 receptor##BC132686|IL6R|3570|interleukin 6 receptor##NM_000565|IL6R|3570|interleukin 6 receptor##NM_001206866|IL6R|3570|interleukin 6 receptor##NM_181359|IL6R|3570|interleukin 6 receptor##X12830|IL6R|3570|interleukin 6 receptor##BC089410|IL6R|3570|interleukin 6 receptor##BC143765|SHE|126669|Src homology 2 domain containing E##BC117210|SHE|126669|Src homology 2 domain containing E##NM_001010846|SHE|126669|Src homology 2 domain containing E##BC044864|TDRD10|126668|tudor domain containing 10##NM_001098475|TDRD10|126668|tudor domain containing 10##NM_182499|TDRD10|126668|tudor domain containing 10##BC107057|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY112698|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY948200|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##NM_017582|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1	0.319039	CTCF.p2:-12:0.319
chr1	27481601	27481755	reg1023686.p1	5.208	+	M96066 S68616 NM_003047 TSC_hg19_v1_chr1_-_27481521	-217	-	TSC_hg19_v1_chr1_-_27339448 AK122816	-142224	-	BC012790 BC014160 NM_052943 TSC_hg19_v1_chr1_-_27339338	-142344	-	NM_015023 TSC_hg19_v1_chr1_+_27561056	79356	+	TSC_hg19_v1_chr1_+_27561124 AK315564	79449	+	TSC_hg19_v1_chr1_+_27561153 BC032523	79484	+	M96066|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##S68616|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_003047|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##AK122816|FAM46B|115572|family with sequence similarity 46, member B##BC012790|FAM46B|115572|family with sequence similarity 46, member B##BC014160|FAM46B|115572|family with sequence similarity 46, member B##NM_052943|FAM46B|115572|family with sequence similarity 46, member B##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1##BC032523|WDTC1|23038|WD and tetratricopeptide repeats 1	0.0	
chr14	83929996	83930067	reg1020787.p1	5.208	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-1929804	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-1929883	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-2065205	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	2066442	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	2066510	+	TSC_hg19_v1_chr14_+_85999692 AK297248	2069554	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.99896	CTCF.p2:3:0.999
chr2	242728189	242728369	reg1027428.p2	5.208	+	AB040610 NM_022134 BC117293 BC117295	-11999	+	TSC_hg19_v1_chr2_+_242674044 AK304764 AK094149 BC071598 NM_152783 AK091725 AK304773 AX747146 BC036604	-54238	+	TSC_hg19_v1_chr2_+_242641311 AK289958 AK074422 NM_032329 AK300790 BC005370 BC071899 AF189286 AB527747 CU675145 CU687190 EU832330 EU832415	-86884	+	NM_001167600 NM_001167601 TSC_hg19_v1_chr2_+_242750226	21917	+	TSC_hg19_v1_chr2_+_242750289 AK289421 AK300969 AK025617 AK096992 AK298403 AY203952	22015	+	AK091038 AX746745 NM_001167599 NM_001167602 NM_080741 BC012899	23771	+	AB040610|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##NM_022134|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##BC117293|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##BC117295|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##AK304764|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK094149|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##BC071598|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##NM_152783|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK091725|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK304773|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##BC036604|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK289958|ING5|84289|inhibitor of growth family, member 5##AK074422|ING5|84289|inhibitor of growth family, member 5##NM_032329|ING5|84289|inhibitor of growth family, member 5##BC005370|ING5|84289|inhibitor of growth family, member 5##BC071899|ING5|84289|inhibitor of growth family, member 5##AF189286|ING5|84289|inhibitor of growth family, member 5##NM_001167600|NEU4|129807|sialidase 4##NM_001167601|NEU4|129807|sialidase 4##AK289421|NEU4|129807|sialidase 4##AK300969|NEU4|129807|sialidase 4##AK025617|NEU4|129807|sialidase 4##AK096992|NEU4|129807|sialidase 4##AK298403|NEU4|129807|sialidase 4##AY203952|NEU4|129807|sialidase 4##AK091038|NEU4|129807|sialidase 4##NM_001167599|NEU4|129807|sialidase 4##NM_001167602|NEU4|129807|sialidase 4##NM_080741|NEU4|129807|sialidase 4##BC012899|NEU4|129807|sialidase 4	0.0	
chr3	7036112	7036221	reg1024425.p1	5.208	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	-133268	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	-133367	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-1806675	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	1507164	-	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	1507349	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	1507415	+	X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1	0.04719	
chr9	11319588	11319690	reg1028604.p2	5.208	+	BC028038 NM_002839	-706917	-	TSC_hg19_v1_chr9_+_8858136 AK094342	-2461506	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-2585720	-	NM_000550 X51420 BC052608	1373786	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	1455377	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	1456142	+	BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##HQ257895|C9orf150|286343|chromosome 9 open reading frame 150	0.355095	CTCF.p2:11:0.355
chr10	117466118	117466273	reg1027853.p2	5.207	+	TSC_hg19_v1_chr10_+_116853123 BC029592 BC035157 NM_207303 BC139916 BC139923 BC047716	-613047	+	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	-768232	+	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	-884646	+	AB590245 DQ892210 DQ895406 AF042080 U95847 U97144 BC014962 NM_145793	565485	-	AK292886 NM_001145453	566561	-	AF038421 NM_005264 TSC_hg19_v1_chr10_-_118033147	566873	-	BC029592|ATRNL1|26033|attractin-like 1##BC035157|ATRNL1|26033|attractin-like 1##NM_207303|ATRNL1|26033|attractin-like 1##BC139916|ATRNL1|26033|attractin-like 1##BC139923|ATRNL1|26033|attractin-like 1##BC047716|ATRNL1|26033|attractin-like 1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##DQ892210|GFRA1|2674|GDNF family receptor alpha 1##DQ895406|GFRA1|2674|GDNF family receptor alpha 1##AF042080|GFRA1|2674|GDNF family receptor alpha 1##U95847|GFRA1|2674|GDNF family receptor alpha 1##U97144|GFRA1|2674|GDNF family receptor alpha 1##BC014962|GFRA1|2674|GDNF family receptor alpha 1##NM_145793|GFRA1|2674|GDNF family receptor alpha 1##AK292886|GFRA1|2674|GDNF family receptor alpha 1##NM_001145453|GFRA1|2674|GDNF family receptor alpha 1##AF038421|GFRA1|2674|GDNF family receptor alpha 1##NM_005264|GFRA1|2674|GDNF family receptor alpha 1	0.994681	CTCF.p2:-10:0.995
chr15	92396053	92396159	reg1026268.p1	5.207	+	AB018278 TSC_hg19_v1_chr15_+_91769341 CR457086 DQ891614 EU176590	-626695	+	TSC_hg19_v1_chr15_+_91643558 AF052188	-752547	+	TSC_hg19_v1_chr15_+_91643505 NM_014848 BC030011	-752620	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	837	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	991	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	1461	+	AB018278|SV2B|9899|synaptic vesicle glycoprotein 2B##CR457086|SV2B|9899|synaptic vesicle glycoprotein 2B##DQ891614|SV2B|9899|synaptic vesicle glycoprotein 2B##EU176590|SV2B|9899|synaptic vesicle glycoprotein 2B##AF052188|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_014848|SV2B|9899|synaptic vesicle glycoprotein 2B##BC030011|SV2B|9899|synaptic vesicle glycoprotein 2B##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1	0.029935	
chr17	75007384	75007510	reg1028049.p1	5.207	+	AB114297 NM_198955 BC144361	-138687	+	TSC_hg19_v1_chr17_+_74864556 AK057861 AB235153 BC041577 NM_001199172 NM_144677 BC062354	-142781	+	TSC_hg19_v1_chr17_+_74734111 AK308058 AF015184 AK000233	-273294	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	77350	+	NM_001204410 FM995496 AF130050	77821	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	129587	+	AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AK308058|MFSD11|79157|major facilitator superfamily domain containing 11##AF015184|MFSD11|79157|major facilitator superfamily domain containing 11##AK000233|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001204410|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995496|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AF130050|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)	0.877657	CTCF.p2:7:0.878
chr18	56224472	56224646	reg1027400.p2	5.207	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-335709	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-335756	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-335797	+	BX647796 NM_052947	71629	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	114082	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	114169	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.0	
chr19	38524507	38524687	reg1024613.p2	5.207	+	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	-126685	+	TSC_hg19_v1_chr19_+_38397847 NM_015073	-126740	+	AK302913 AY026504 AK128826 NM_031951	-127323	-	AB463560 GQ358728 BC125152 BC125153 U43843 AK308563 NM_001135155 NM_004647	190238	-	BC021191 TSC_hg19_v1_chr19_-_38720320 NM_001135156	195719	-	TSC_hg19_v1_chr19_-_38720336 AK297581	195737	-	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##AK302913|WDR87|83889|WD repeat domain 87##AY026504|WDR87|83889|WD repeat domain 87##AK128826|WDR87|83889|WD repeat domain 87##NM_031951|WDR87|83889|WD repeat domain 87##GQ358728|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125152|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125153|DPF1|8193|D4, zinc and double PHD fingers family 1##U43843|DPF1|8193|D4, zinc and double PHD fingers family 1##AK308563|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135155|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_004647|DPF1|8193|D4, zinc and double PHD fingers family 1##BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1##AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1	0.0	
chr19	54605807	54605987	reg1024319.p1	5.207	+	TSC_hg19_v1_chr19_-_54604114 AF391163 AF474153 DQ893697 DQ894733 AF391162 AK091111 AX746784 AK311307 AK130199 AF391164 AF474152 AF251702 NM_130771 NM_133168 NM_133169 NM_206818	-1778	-	DQ479398 NM_001135686	-21264	-	FN398145 FJ584316 FJ584317 FJ584318 FJ584319 FJ584320 FJ882051 DQ479397 BC100942 BC100943 AX721201 AY358542 NM_198481	-38777	-	TSC_hg19_v1_chr19_+_54606162 AF070653 BC061644 NM_004542 AK289489 BC011021 BC022369 AF044955 CR542143	269	+	NM_015629 DQ426885 AY040822 BC117389	12930	+	AK310647 AF052052 AK310627 NM_013342	13142	-	AF391163|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF474153|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##DQ893697|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##DQ894733|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF391162|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK091111|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK311307|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK130199|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF391164|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF474152|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF251702|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_130771|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_133168|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_133169|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_206818|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##DQ479398|TARM1|441864|T cell-interacting, activating receptor on myeloid cells 1##NM_001135686|TARM1|441864|T cell-interacting, activating receptor on myeloid cells 1##FN398145|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584316|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584317|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584318|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584319|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584320|VSTM1|284415|V-set and transmembrane domain containing 1##FJ882051|VSTM1|284415|V-set and transmembrane domain containing 1##DQ479397|VSTM1|284415|V-set and transmembrane domain containing 1##BC100942|VSTM1|284415|V-set and transmembrane domain containing 1##BC100943|VSTM1|284415|V-set and transmembrane domain containing 1##AY358542|VSTM1|284415|V-set and transmembrane domain containing 1##NM_198481|VSTM1|284415|V-set and transmembrane domain containing 1##AF070653|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##BC061644|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##NM_004542|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##AK289489|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##BC011021|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##BC022369|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##AF044955|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##CR542143|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##NM_015629|PRPF31|26121|PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae)##AY040822|PRPF31|26121|PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae)##BC117389|PRPF31|26121|PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae)##AK310647|TFPT|29844|TCF3 (E2A) fusion partner (in childhood Leukemia)##AF052052|TFPT|29844|TCF3 (E2A) fusion partner (in childhood Leukemia)##AK310627|TFPT|29844|TCF3 (E2A) fusion partner (in childhood Leukemia)##NM_013342|TFPT|29844|TCF3 (E2A) fusion partner (in childhood Leukemia)	0.0	
chr3	175658875	175658999	reg1017356.p1	5.207	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	-1081847	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	-1500217	+	BC032555 NM_014932	-2542694	+	TSC_hg19_v1_chr3_-_176914267 BX648935	1255313	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	1256014	-	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	1256122	-	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.991693	CTCF.p2:-10:0.992
chr7	100674498	100674598	reg1027397.p1	5.207	+	TSC_hg19_v1_chr7_+_100663360 AJ606307 AJ606308 NM_001040105	-11183	+	NM_001164462	-61645	+	AK130455 TSC_hg19_v1_chr7_+_100612694	-61855	+	BC005847 TSC_hg19_v1_chr7_+_100728767 AK092927 AX747810 BC048194 NM_030961 BC011882	54212	+	NM_000602 NM_001165413 TSC_hg19_v1_chr7_+_100770384 AK293248 AK297728 AK298048 AK316225 BC020765 X04729 BC010860 X04429 X12701 BC005927 M16006	95866	+	NM_001283 TSC_hg19_v1_chr7_+_100797756 AK312151 BC003561 AB015319	123180	+	AJ606307|MUC17|140453|mucin 17, cell surface associated##AJ606308|MUC17|140453|mucin 17, cell surface associated##NM_001040105|MUC17|140453|mucin 17, cell surface associated##NM_001164462|MUC12|10071|mucin 12, cell surface associated##BC005847|TRIM56|81844|tripartite motif containing 56##BC048194|TRIM56|81844|tripartite motif containing 56##NM_030961|TRIM56|81844|tripartite motif containing 56##BC011882|TRIM56|81844|tripartite motif containing 56##NM_000602|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001165413|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK293248|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK297728|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK298048|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK316225|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC020765|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04729|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC010860|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04429|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X12701|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC005927|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##M16006|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001283|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AK312151|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC003561|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AB015319|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit	0.0	
chr8	104116543	104116684	reg1027034.p1	5.207	+	TSC_hg19_v1_chr8_+_104033310 AK308632 BC010960 X69151 AK000064	-83293	+	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	-83346	+	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	-240218	-	TSC_hg19_v1_chr8_+_104152984 NM_001024372 NM_024812 BC035038 AK022077 BC011517 AK093819 AF371319 AF371323 DQ893318 DQ896633	36387	+	NM_001164615 BX640609 AK313789	194061	+	NM_001164616 NM_003506 TSC_hg19_v1_chr8_+_104311103 AK299341 AK296824 BC060836 BC036106 AB012911 AK304092 AK316544	194478	+	AK308632|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC010960|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##X69151|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK000064|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##NM_001024372|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_024812|BAALC|79870|brain and acute leukemia, cytoplasmic##BC035038|BAALC|79870|brain and acute leukemia, cytoplasmic##AK022077|BAALC|79870|brain and acute leukemia, cytoplasmic##BC011517|BAALC|79870|brain and acute leukemia, cytoplasmic##AK093819|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371319|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371323|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ893318|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ896633|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_001164615|FZD6|8323|frizzled family receptor 6##BX640609|FZD6|8323|frizzled family receptor 6##AK313789|FZD6|8323|frizzled family receptor 6##NM_001164616|FZD6|8323|frizzled family receptor 6##NM_003506|FZD6|8323|frizzled family receptor 6##AK299341|FZD6|8323|frizzled family receptor 6##AK296824|FZD6|8323|frizzled family receptor 6##BC060836|FZD6|8323|frizzled family receptor 6##BC036106|FZD6|8323|frizzled family receptor 6##AB012911|FZD6|8323|frizzled family receptor 6##AK304092|FZD6|8323|frizzled family receptor 6##AK316544|FZD6|8323|frizzled family receptor 6	0.822854	CTCF.p2:-16:0.823
chrX	120388329	120388450	reg1028023.p1	5.207	+	TSC_hg19_v1_chrX_+_120181464 BC050732 NM_012084 AK313356	-206949	+	BC029540 NM_001080141 NM_001080146	-268752	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080141 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	-273612	-	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	1929851	+	TSC_hg19_v1_chrX_-_122866885 AK001758	2478494	-	TSC_hg19_v1_chrX_-_122866897 NM_001081550	2478508	-	BC050732|GLUD2|2747|glutamate dehydrogenase 2##NM_012084|GLUD2|2747|glutamate dehydrogenase 2##AK313356|GLUD2|2747|glutamate dehydrogenase 2##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##AK001758|THOC2|57187|THO complex 2##NM_001081550|THOC2|57187|THO complex 2	0.020849	
chr18	61009586	61009709	reg1026526.p1	5.206	+	TSC_hg19_v1_chr18_-_60987309 M13994	-22361	-	TSC_hg19_v1_chr18_-_60986977 X06487	-22654	-	BC027258 NM_000633 NM_000657	-23087	-	AB529042 BT006782 AK312360 TSC_hg19_v1_chr18_-_61034440 AK297670 AK025120 X63657 BC008797 NM_002035	24780	-	CU691728 EU831666 EU831748 AY232629 TSC_hg19_v1_chr18_-_61089613	79908	-	TSC_hg19_v1_chr18_-_61089648 AK291253	80000	-	M13994|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##BT006782|KDSR|2531|3-ketodihydrosphingosine reductase##AK312360|KDSR|2531|3-ketodihydrosphingosine reductase##AK297670|KDSR|2531|3-ketodihydrosphingosine reductase##AK025120|KDSR|2531|3-ketodihydrosphingosine reductase##X63657|KDSR|2531|3-ketodihydrosphingosine reductase##BC008797|KDSR|2531|3-ketodihydrosphingosine reductase##NM_002035|KDSR|2531|3-ketodihydrosphingosine reductase##EU831666|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##EU831748|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AY232629|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)##AK291253|VPS4B|9525|vacuolar protein sorting 4 homolog B (S. cerevisiae)	0.376577	CTCF.p2:-15:0.377
chr6	5057477	5057593	reg1024061.p1	5.206	+	TSC_hg19_v1_chr6_+_5030223 BC042032 BC133670	-27302	+	TSC_hg19_v1_chr6_-_5004262 BC017871 NM_006638	-53265	-	TSC_hg19_v1_chr6_+_5004043 AK094934	-53509	+	NM_001145115	28184	+	AF088060 EU831799 EU831876 TSC_hg19_v1_chr6_-_5260976 AK309661 AK291158 BC067762 AF170070 AF285118 BC009552	203462	-	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	203631	-	BC042032|LOC100129461|100129461|uncharacterized LOC100129461##BC133670|LOC100129461|100129461|uncharacterized LOC100129461##BC017871|RPP40|10799|ribonuclease P/MRP 40kDa subunit##NM_006638|RPP40|10799|ribonuclease P/MRP 40kDa subunit##AK094934|LOC285778|285778|uncharacterized LOC285778##NM_001145115|PPP1R3G|648791|protein phosphatase 1, regulatory subunit 3G##AF088060|LYRM4|57128|LYR motif containing 4##EU831799|LYRM4|57128|LYR motif containing 4##EU831876|LYRM4|57128|LYR motif containing 4##AK309661|LYRM4|57128|LYR motif containing 4##AK291158|LYRM4|57128|LYR motif containing 4##BC067762|LYRM4|57128|LYR motif containing 4##AF170070|LYRM4|57128|LYR motif containing 4##AF285118|LYRM4|57128|LYR motif containing 4##BC009552|LYRM4|57128|LYR motif containing 4##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4	0.780683	CTCF.p2:-4:0.781
chr9	7186342	7186468	reg1029860.p2	5.206	+	TSC_hg19_v1_chr9_+_6757984 AB018323 AK304095 AK314355 AB037901 BC008296 AK303651 AK304032 BC104859 BC104861 BC143571	-428366	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	-428738	+	AK310439 NM_001146696	-465543	+	AL137489 TSC_hg19_v1_chr9_-_7799779 BC009510 AK308643 AK128876 AK292632 NM_033428	613310	-	TSC_hg19_v1_chr9_+_8713275 AY779046	1526887	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	1547514	-	AB018323|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304095|KDM4C|23081|lysine (K)-specific demethylase 4C##AK314355|KDM4C|23081|lysine (K)-specific demethylase 4C##AB037901|KDM4C|23081|lysine (K)-specific demethylase 4C##BC008296|KDM4C|23081|lysine (K)-specific demethylase 4C##AK303651|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304032|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104859|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104861|KDM4C|23081|lysine (K)-specific demethylase 4C##BC143571|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##AL137489|C9orf123|90871|chromosome 9 open reading frame 123##BC009510|C9orf123|90871|chromosome 9 open reading frame 123##AK292632|C9orf123|90871|chromosome 9 open reading frame 123##NM_033428|C9orf123|90871|chromosome 9 open reading frame 123##AY779046|RPL18A|6142|ribosomal protein L18a##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	0.089186	
chr22	41697494	41697605	reg1025518.p1	5.205	+	TSC_hg19_v1_chr22_+_41697577 BC152558 AK225891 AK315009 BC016159 NM_017590 BC098378	-35	+	AK303524 TSC_hg19_v1_chr22_-_41682189 NM_002883	-15342	-	BC014044 TSC_hg19_v1_chr22_-_41682182	-15373	-	TSC_hg19_v1_chr22_+_41697583 AF188530 AK023849	101	+	TSC_hg19_v1_chr22_+_41763458 NM_001145398 AK091916 AB051442 AB385204	65867	+	TSC_hg19_v1_chr22_+_41777945 BC042476 NM_003216 BC039258 U44059 AK314906 AK295595 HM370396 CR456592 CU013192 CU013480 DQ890611 DQ893781 CR541827 CU691698 U06935	80479	+	BC152558|ZC3H7B|23264|zinc finger CCCH-type containing 7B##AK225891|ZC3H7B|23264|zinc finger CCCH-type containing 7B##AK315009|ZC3H7B|23264|zinc finger CCCH-type containing 7B##NM_017590|ZC3H7B|23264|zinc finger CCCH-type containing 7B##BC098378|ZC3H7B|23264|zinc finger CCCH-type containing 7B##AK303524|RANGAP1|5905|Ran GTPase activating protein 1##NM_002883|RANGAP1|5905|Ran GTPase activating protein 1##BC014044|RANGAP1|5905|Ran GTPase activating protein 1##AF188530|ZC3H7B|23264|zinc finger CCCH-type containing 7B##AK023849|ZC3H7B|23264|zinc finger CCCH-type containing 7B##NM_001145398|TEF|7008|thyrotrophic embryonic factor##AK091916|TEF|7008|thyrotrophic embryonic factor##AB051442|TEF|7008|thyrotrophic embryonic factor##BC042476|TEF|7008|thyrotrophic embryonic factor##NM_003216|TEF|7008|thyrotrophic embryonic factor##BC039258|TEF|7008|thyrotrophic embryonic factor##U44059|TEF|7008|thyrotrophic embryonic factor##AK314906|TEF|7008|thyrotrophic embryonic factor##AK295595|TEF|7008|thyrotrophic embryonic factor##HM370396|TEF|7008|thyrotrophic embryonic factor##CR456592|TEF|7008|thyrotrophic embryonic factor##CU013192|TEF|7008|thyrotrophic embryonic factor##CU013480|TEF|7008|thyrotrophic embryonic factor##DQ890611|TEF|7008|thyrotrophic embryonic factor##DQ893781|TEF|7008|thyrotrophic embryonic factor##CR541827|TEF|7008|thyrotrophic embryonic factor##U06935|TEF|7008|thyrotrophic embryonic factor	0.027429	
chr2	8683525	8683706	reg1023045.p1	5.205	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1626028	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1665752	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1676912	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	138588	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	294104	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	460206	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr1	116563423	116563551	reg1029237.p1	5.204	+	TSC_hg19_v1_chr1_+_116519194 BC070033 AY358258 AY145501 CU693234 DQ892367 DQ895576	-44258	+	NM_018420 BC026358 TSC_hg19_v1_chr1_+_116519161	-44344	+	BC096359 BC096360 TSC_hg19_v1_chr1_-_116383744 M96740 NM_005599	-179767	-	AK096035 NM_152367	90888	+	NM_000701 TSC_hg19_v1_chr1_+_116915824	352324	+	BC003077 TSC_hg19_v1_chr1_+_116915881 BC050359	352395	+	BC070033|SLC22A15|55356|solute carrier family 22, member 15##AY358258|SLC22A15|55356|solute carrier family 22, member 15##AY145501|SLC22A15|55356|solute carrier family 22, member 15##DQ892367|SLC22A15|55356|solute carrier family 22, member 15##DQ895576|SLC22A15|55356|solute carrier family 22, member 15##NM_018420|SLC22A15|55356|solute carrier family 22, member 15##BC026358|SLC22A15|55356|solute carrier family 22, member 15##BC096359|NHLH2|4808|nescient helix loop helix 2##BC096360|NHLH2|4808|nescient helix loop helix 2##M96740|NHLH2|4808|nescient helix loop helix 2##NM_005599|NHLH2|4808|nescient helix loop helix 2##AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_000701|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC003077|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC050359|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.144372	
chr3	167812633	167812777	reg1024104.p2	5.204	+	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-359216	+	BC002506 NM_007217 AF022385 NM_145860 TSC_hg19_v1_chr3_-_167452681 BC016353 NM_145859 AK291130	-360054	-	TSC_hg19_v1_chr3_-_167371732 AK097556	-440982	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	410	-	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	726	-	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	1051374	-	NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC002506|PDCD10|11235|programmed cell death 10##NM_007217|PDCD10|11235|programmed cell death 10##AF022385|PDCD10|11235|programmed cell death 10##NM_145860|PDCD10|11235|programmed cell death 10##BC016353|PDCD10|11235|programmed cell death 10##NM_145859|PDCD10|11235|programmed cell death 10##AK291130|PDCD10|11235|programmed cell death 10##AK097556|WDR49|151790|WD repeat domain 49##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus	0.0	
chr5	65794692	65794794	reg1028571.p1	5.204	+	BC067770 NM_139168	-354081	+	TSC_hg19_v1_chr5_+_65440162 AK308287 BC017000 AK091758 AX747166 BC047322	-354574	+	TSC_hg19_v1_chr5_+_65440053 NM_001077199	-354683	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	97465	+	AY830839 BC018692 NM_015183	329860	+	BC109069 BC109070 D83597 NM_005582 AK313177	697857	-	BC067770|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_139168|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK308287|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC017000|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK091758|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC047322|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_001077199|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule	1.474343	CTCF.p2:7:0.945	CTCF.p2:-95:0.529
chr6	118097768	118097882	reg1026002.p1	5.204	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-101159	+	BC110325 TSC_hg19_v1_chr6_+_117996661 BC063794	-101164	+	TSC_hg19_v1_chr6_+_117996651 BC150654 BC150655 AK125119	-101178	+	BC028615 NM_001029858 BC114925	130865	+	NM_002667 M63603 AK311799 BC005269	771640	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	875211	-	AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC110325|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC063794|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150654|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150655|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##AK125119|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like	0.0	
chr6	126682303	126682416	reg1026700.p2	5.204	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	-21089	+	TSC_hg19_v1_chr6_+_126307685 AK308651	-374696	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	-374757	+	TSC_hg19_v1_chr6_+_127439818 BC022367	757452	+	NM_032784 AF251057	757692	+	NM_001242851 NM_001242844 NM_001242849 NM_001242852 TSC_hg19_v1_chr6_+_127587982 NM_001242845 NM_001242846 NM_001242850 NM_030963	905545	+	BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC022367|RSPO3|84870|R-spondin 3##NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3##NM_001242851|RNF146|81847|ring finger protein 146##NM_001242844|RNF146|81847|ring finger protein 146##NM_001242849|RNF146|81847|ring finger protein 146##NM_001242852|RNF146|81847|ring finger protein 146##NM_001242845|RNF146|81847|ring finger protein 146##NM_001242846|RNF146|81847|ring finger protein 146##NM_001242850|RNF146|81847|ring finger protein 146##NM_030963|RNF146|81847|ring finger protein 146	0.97259	CTCF.p2:6:0.973
chr8	11755215	11755396	reg1020475.p3	5.204	+	TSC_hg19_v1_chr8_-_11725628 NM_001908 NM_147780 NM_147781 NM_147782 NM_147783	-29607	-	TSC_hg19_v1_chr8_-_11725624 AK075393	-29681	-	AK092070 AK130184 AK290239 AK297687 BC095408 TSC_hg19_v1_chr8_-_11725597 AK296845 BX647952	-29708	-	AY621333 DQ012026 NM_001033018	76802	-	AY621332 DQ012025 NM_001033017	84524	+	AY621331 DQ012024 NM_001033019 BC130461 BC130463	98484	-	NM_001908|CTSB|1508|cathepsin B##NM_147780|CTSB|1508|cathepsin B##NM_147781|CTSB|1508|cathepsin B##NM_147782|CTSB|1508|cathepsin B##NM_147783|CTSB|1508|cathepsin B##AK075393|CTSB|1508|cathepsin B##AK092070|CTSB|1508|cathepsin B##AK130184|CTSB|1508|cathepsin B##AK290239|CTSB|1508|cathepsin B##AK297687|CTSB|1508|cathepsin B##BC095408|CTSB|1508|cathepsin B##AK296845|CTSB|1508|cathepsin B##BX647952|CTSB|1508|cathepsin B##AY621333|DEFB136|613210|defensin, beta 136##DQ012026|DEFB136|613210|defensin, beta 136##NM_001033018|DEFB136|613210|defensin, beta 136##AY621332|DEFB135|613209|defensin, beta 135##DQ012025|DEFB135|613209|defensin, beta 135##NM_001033017|DEFB135|613209|defensin, beta 135##AY621331|DEFB134|613211|defensin, beta 134##DQ012024|DEFB134|613211|defensin, beta 134##NM_001033019|DEFB134|613211|defensin, beta 134##BC130461|DEFB134|613211|defensin, beta 134##BC130463|DEFB134|613211|defensin, beta 134	0.0	
chr16	85859044	85859191	reg1027646.p1	5.203	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-25782	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-25812	+	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	-25884	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	73669	+	TSC_hg19_v1_chr16_-_86542463 AK091834	683347	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	685039	+	BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1	0.027633	
chr2	227661706	227661826	reg1027029.p1	5.203	+	NM_020864 BC131727 AB040919	-1396121	+	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	-1754418	-	TSC_hg19_v1_chr2_-_225811768 EU236710	-1850012	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	1713	-	TSC_hg19_v1_chr2_-_227664534 S62539	2733	-	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	38964	+	NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##EU236710|DOCK10|55619|dedicator of cytokinesis 10##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##S62539|IRS1|3667|insulin receptor substrate 1##NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1	0.973913	CTCF.p2:6:0.949
chr5	149940747	149940928	reg1000453.p3	5.203	+	AK292448 NM_001543 U36600	-53124	+	TSC_hg19_v1_chr5_+_149865341 AB209107	-75398	+	TSC_hg19_v1_chr5_-_149829301 BC003401 BC001126 BC006784 BC110792 AK312179 BC091474 NM_001025070 NM_001025071 NM_005617	-111546	-	TSC_hg19_v1_chr5_+_149980641 AL831818 NM_001166208	39805	+	AK127049 NM_001166209	56368	+	TSC_hg19_v1_chr5_+_150020221 NM_001109974 NM_007286 AK290178 BC042624 BC146665 AB028952 BC152538 BC142683 AF499136 AF499137	79456	+	AK292448|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##NM_001543|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##U36600|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##BC003401|RPS14|6208|ribosomal protein S14##BC001126|RPS14|6208|ribosomal protein S14##BC006784|RPS14|6208|ribosomal protein S14##BC110792|RPS14|6208|ribosomal protein S14##AK312179|RPS14|6208|ribosomal protein S14##BC091474|RPS14|6208|ribosomal protein S14##NM_001025070|RPS14|6208|ribosomal protein S14##NM_001025071|RPS14|6208|ribosomal protein S14##NM_005617|RPS14|6208|ribosomal protein S14##AL831818|SYNPO|11346|synaptopodin##NM_001166208|SYNPO|11346|synaptopodin##AK127049|SYNPO|11346|synaptopodin##NM_001166209|SYNPO|11346|synaptopodin##NM_001109974|SYNPO|11346|synaptopodin##NM_007286|SYNPO|11346|synaptopodin##AK290178|SYNPO|11346|synaptopodin##BC042624|SYNPO|11346|synaptopodin##BC146665|SYNPO|11346|synaptopodin##AB028952|SYNPO|11346|synaptopodin##BC152538|SYNPO|11346|synaptopodin##BC142683|SYNPO|11346|synaptopodin##AF499136|SYNPO|11346|synaptopodin##AF499137|SYNPO|11346|synaptopodin	0.0	
chr7	81157062	81157207	reg1025756.p1	5.203	+	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-608460	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-608700	-	HM217020 HM217021 HM217022 HM217023 HM217024 HM217025 HM217026 AB590184 CU678951 DQ893062 DQ896314 TSC_hg19_v1_chr7_+_80276126	-881087	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	242240	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	915712	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	915946	-	AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##HM217020|CD36|948|CD36 molecule (thrombospondin receptor)##HM217021|CD36|948|CD36 molecule (thrombospondin receptor)##HM217022|CD36|948|CD36 molecule (thrombospondin receptor)##HM217023|CD36|948|CD36 molecule (thrombospondin receptor)##HM217024|CD36|948|CD36 molecule (thrombospondin receptor)##HM217025|CD36|948|CD36 molecule (thrombospondin receptor)##HM217026|CD36|948|CD36 molecule (thrombospondin receptor)##DQ893062|CD36|948|CD36 molecule (thrombospondin receptor)##DQ896314|CD36|948|CD36 molecule (thrombospondin receptor)##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1	0.166404	
chr10	103769461	103769641	reg1000298.p1	5.202	+	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	-165944	-	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	-169939	-	TSC_hg19_v1_chr10_-_103578213 NM_001142434 NM_012215	-191333	-	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	46361	-	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	55591	+	AK300588 TSC_hg19_v1_chr10_-_103874641	105068	-	BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##NM_001142434|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##NM_012215|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6##AK300588|LDB1|8861|LIM domain binding 1	0.0	
chr1	2487898	2488019	reg1006216.p4	5.202	+	AK300515 NM_003820 U70321 AK303468 BC029848 BC002794 BC018882 U81232 AF153978 AK310076 AB208808 AY358879 CU678202 AB590572 DQ893000 DQ896755 AF373877 AF373878 CR456909	-5	+	BC087840 DQ272660 NM_001010926	-26275	-	TSC_hg19_v1_chr1_-_2458040 AL442072 BC043496 AK001644 AK223546 AK303127 AK309860 NM_018216 AK295301	-29894	-	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	30230	+	TSC_hg19_v1_chr1_+_2518534 AK094901	30556	+	AK093058 AX747891 NM_033467 TSC_hg19_v1_chr1_-_2564497	76507	-	AK300515|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##NM_003820|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U70321|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK303468|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC029848|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC002794|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC018882|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U81232|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF153978|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK310076|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AB208808|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AY358879|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ893000|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ896755|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373877|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373878|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##CR456909|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC087840|HES5|388585|hairy and enhancer of split 5 (Drosophila)##DQ272660|HES5|388585|hairy and enhancer of split 5 (Drosophila)##NM_001010926|HES5|388585|hairy and enhancer of split 5 (Drosophila)##AL442072|PANK4|55229|pantothenate kinase 4##BC043496|PANK4|55229|pantothenate kinase 4##AK001644|PANK4|55229|pantothenate kinase 4##AK223546|PANK4|55229|pantothenate kinase 4##AK303127|PANK4|55229|pantothenate kinase 4##AK309860|PANK4|55229|pantothenate kinase 4##NM_018216|PANK4|55229|pantothenate kinase 4##AK295301|PANK4|55229|pantothenate kinase 4##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B##AK094901|FAM213B|127281|family with sequence similarity 213, member B##AK093058|MMEL1|79258|membrane metallo-endopeptidase-like 1##NM_033467|MMEL1|79258|membrane metallo-endopeptidase-like 1	0.011847	
chr15	74419680	74419861	reg1000131.p1	5.202	+	BC131515 AK292574 AF263742 NM_001038640	-44890	-	TSC_hg19_v1_chr15_+_74287153 AB384942 CU674024 BT009911	-132614	+	TSC_hg19_v1_chr15_+_74287135 M79462 M79463 M79464 M80185 AB208950	-132631	+	AK092302 AX747465 AB040898 BC152429 NM_001130136	1936	+	AK309388 NM_001130137 BC028042	2222	+	NM_001130138	2819	+	BC131515|GOLGA6A|342096|golgin A6 family, member A##AK292574|GOLGA6A|342096|golgin A6 family, member A##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001038640|GOLGA6A|342096|golgin A6 family, member A##BT009911|PML|5371|promyelocytic leukemia##M79462|PML|5371|promyelocytic leukemia##M79463|PML|5371|promyelocytic leukemia##M79464|PML|5371|promyelocytic leukemia##M80185|PML|5371|promyelocytic leukemia##AB208950|PML|5371|promyelocytic leukemia##AK092302|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AB040898|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC152429|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130136|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130137|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC028042|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130138|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	0.0	
chr2	32360528	32360637	reg1022107.p1	5.202	+	TSC_hg19_v1_chr2_+_32288665 AB029006 BC150260 NM_014946 NM_199436 AJ246001	-71882	+	TSC_hg19_v1_chr2_-_32264863 AF226998 NM_032574 AK295755 BC015970	-95714	-	AK057760 TSC_hg19_v1_chr2_-_32236109	-124476	-	TSC_hg19_v1_chr2_+_32390932 NM_001193513 NM_001193514 NM_001193515 NM_017964 AK055663 AK096672 AK127716 AK304225 BC066903 EF560719 EF560726 AL832755 AF173387	30347	+	AY358152 BC031555 AK292673 AK314762 AK095467 NM_001199138	129347	-	AY035391 NM_001199139 AY027787 AY027788 AY027789 AY027790 NM_021209 AF376061	130223	-	AB029006|SPAST|6683|spastin##BC150260|SPAST|6683|spastin##NM_014946|SPAST|6683|spastin##NM_199436|SPAST|6683|spastin##AJ246001|SPAST|6683|spastin##AF226998|DPY30|84661|dpy-30 homolog (C. elegans)##NM_032574|DPY30|84661|dpy-30 homolog (C. elegans)##BC015970|DPY30|84661|dpy-30 homolog (C. elegans)##AK057760|MEMO1|51072|mediator of cell motility 1##NM_001193513|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##NM_001193514|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##NM_001193515|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##NM_017964|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AK055663|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AK096672|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AK127716|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AK304225|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##BC066903|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##EF560719|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##EF560726|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AL832755|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AF173387|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AY358152|NLRC4|58484|NLR family, CARD domain containing 4##BC031555|NLRC4|58484|NLR family, CARD domain containing 4##AK292673|NLRC4|58484|NLR family, CARD domain containing 4##AK314762|NLRC4|58484|NLR family, CARD domain containing 4##AK095467|NLRC4|58484|NLR family, CARD domain containing 4##NM_001199138|NLRC4|58484|NLR family, CARD domain containing 4##AY035391|NLRC4|58484|NLR family, CARD domain containing 4##NM_001199139|NLRC4|58484|NLR family, CARD domain containing 4##AY027787|NLRC4|58484|NLR family, CARD domain containing 4##AY027788|NLRC4|58484|NLR family, CARD domain containing 4##AY027789|NLRC4|58484|NLR family, CARD domain containing 4##AY027790|NLRC4|58484|NLR family, CARD domain containing 4##NM_021209|NLRC4|58484|NLR family, CARD domain containing 4##AF376061|NLRC4|58484|NLR family, CARD domain containing 4	0.432083	CTCF.p2:1:0.432
chr2	64545014	64545108	reg1023863.p1	5.202	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-173537	-	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	-298556	-	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	-298799	-	TSC_hg19_v1_chr2_+_64681295 NM_014181	136239	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	136587	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	206423	+	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin	0.186863	
chr4	38180375	38180529	reg1023528.p1	5.202	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-201435	+	AF095288 BC069114 BC069400 NM_006607	-218397	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-287663	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	485374	+	AF289565 TSC_hg19_v1_chr4_-_38666549	486037	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	604147	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr7	84650576	84650752	reg1028745.p2	5.202	+	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-826342	-	NM_012431	-1372186	-	AK303925 NM_001178129	-1379918	-	NM_152754	100582	-	AK309116 TSC_hg19_v1_chr7_-_84816296	165571	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	1622561	+	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3	0.985145	CTCF.p2:-59:0.985
chrX	128888747	128888856	reg1023228.p1	5.202	+	AK300954 U90724 NM_003399 BC126174 BC143901	-15825	+	BC021104 NM_017413	-99879	-	TSC_hg19_v1_chrX_+_128674247 AK226116 BC094726 NM_000276 NM_001587 U57627 AK293107 BC130612 BC144106 BC025253 AB384825	-214503	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	25086	+	TSC_hg19_v1_chrX_+_128913898 AK314869 AK292023 BC051881 AL049683 AB528892	25183	+	AK001524 BC000035 AB209807 TSC_hg19_v1_chrX_-_128977481 NM_001008222	88624	-	AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC021104|APLN|8862|apelin##NM_017413|APLN|8862|apelin##AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe##U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe##AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3##AK314869|SASH3|54440|SAM and SH3 domain containing 3##AK292023|SASH3|54440|SAM and SH3 domain containing 3##BC051881|SASH3|54440|SAM and SH3 domain containing 3##AL049683|SASH3|54440|SAM and SH3 domain containing 3##AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9	0.252028	CTCF.p2:10:0.252
chrX	154285565	154285706	reg1004207.p1	5.202	+	AK295164 TSC_hg19_v1_chrX_-_154255216	-30420	-	NM_023934 AJ272054 BC000255 AF320778 AK313143 BC072685 TSC_hg19_v1_chrX_+_154255191 BC108657 CU674108 AB528138 AM393227 AM393536 AY032594	-30497	+	FN811132 AX746360 X01179 K01740 BC150305 AK292902 M14113 NM_000132 AK307726	-34737	-	TSC_hg19_v1_chrX_-_154299405 BC002600 X64644 NM_001018024 NM_001018025	13812	-	TSC_hg19_v1_chrX_+_154299709 NM_001018055 NM_001242640 NM_024332	14072	+	TSC_hg19_v1_chrX_+_154299784 AK310286 X64643 AK299194 AK313544 BC002999 BC006540 AB462964 AM392829 AY438030 CU678330 AK298886	14155	+	AK295164|F8|2157|coagulation factor VIII, procoagulant component##NM_023934|FUNDC2|65991|FUN14 domain containing 2##AJ272054|FUNDC2|65991|FUN14 domain containing 2##BC000255|FUNDC2|65991|FUN14 domain containing 2##AF320778|FUNDC2|65991|FUN14 domain containing 2##AK313143|FUNDC2|65991|FUN14 domain containing 2##BC072685|FUNDC2|65991|FUN14 domain containing 2##BC108657|FUNDC2|65991|FUN14 domain containing 2##AM393227|FUNDC2|65991|FUN14 domain containing 2##AM393536|FUNDC2|65991|FUN14 domain containing 2##AY032594|FUNDC2|65991|FUN14 domain containing 2##FN811132|F8|2157|coagulation factor VIII, procoagulant component##AX746360|F8|2157|coagulation factor VIII, procoagulant component##X01179|F8|2157|coagulation factor VIII, procoagulant component##K01740|F8|2157|coagulation factor VIII, procoagulant component##AK292902|F8|2157|coagulation factor VIII, procoagulant component##M14113|F8|2157|coagulation factor VIII, procoagulant component##NM_000132|F8|2157|coagulation factor VIII, procoagulant component##AK307726|F8|2157|coagulation factor VIII, procoagulant component##BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##NM_001018025|MTCP1|4515|mature T-cell proliferation 1##NM_001018055|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_001242640|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_024332|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK310286|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##X64643|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK299194|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK313544|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC002999|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC006540|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AM392829|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AY438030|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK298886|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3	0.0	
chr10	88343895	88344013	reg1025016.p2	5.201	+	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	-62424	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	-62460	-	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	-217691	-	DQ426884 NM_001030015 NM_033282 BC029291 BC113558 BC143688	70440	+	TSC_hg19_v1_chr10_+_88426539 AK294696	82591	+	TSC_hg19_v1_chr10_+_88428170 NM_001171610	84232	+	BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_001030015|OPN4|94233|opsin 4##NM_033282|OPN4|94233|opsin 4##BC029291|OPN4|94233|opsin 4##BC113558|OPN4|94233|opsin 4##BC143688|OPN4|94233|opsin 4##AK294696|LDB3|11155|LIM domain binding 3##NM_001171610|LDB3|11155|LIM domain binding 3	0.105352	
chr11	1861243	1861384	reg1028176.p1	5.201	+	BC032148 NM_001145829	-595	+	NM_003282	-1081	+	NM_138567 AK075202 BC144657 BC144659 BC144660 BC144661	-5596	+	NM_001145841	118	+	NM_002339 TSC_hg19_v1_chr11_+_1874296 AK222733 BC001785 X55188 AK290279 S67783 CR541728 CR541754 CU674886	12973	+	AK092071 AX747343 NM_001242932	25081	+	BC032148|TNNI2|7136|troponin I type 2 (skeletal, fast)##NM_001145829|TNNI2|7136|troponin I type 2 (skeletal, fast)##NM_003282|TNNI2|7136|troponin I type 2 (skeletal, fast)##NM_138567|SYT8|90019|synaptotagmin VIII##AK075202|SYT8|90019|synaptotagmin VIII##BC144657|SYT8|90019|synaptotagmin VIII##BC144659|SYT8|90019|synaptotagmin VIII##BC144660|SYT8|90019|synaptotagmin VIII##BC144661|SYT8|90019|synaptotagmin VIII##NM_001145841|TNNI2|7136|troponin I type 2 (skeletal, fast)##NM_002339|LSP1|4046|lymphocyte-specific protein 1##AK222733|LSP1|4046|lymphocyte-specific protein 1##BC001785|LSP1|4046|lymphocyte-specific protein 1##X55188|LSP1|4046|lymphocyte-specific protein 1##AK290279|LSP1|4046|lymphocyte-specific protein 1##S67783|LSP1|4046|lymphocyte-specific protein 1##CR541728|LSP1|4046|lymphocyte-specific protein 1##CR541754|LSP1|4046|lymphocyte-specific protein 1##AK092071|LSP1|4046|lymphocyte-specific protein 1##NM_001242932|LSP1|4046|lymphocyte-specific protein 1	0.218287	CTCF.p2:60:0.218
chr1	237963302	237963404	reg1024000.p2	5.201	+	NM_001035 X98330 Y08218	-757580	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-1004518	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	-1004776	+	AK314151 NM_021186	90868	-	TSC_hg19_v1_chr1_+_239550016 AK056349	1586589	+	AF279779 NM_000740	1829019	+	NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3	0.674616	CTCF.p2:17:0.675
chr12	53973690	53973820	reg1023687.p2	5.201	+	BC104234 BC104235 AF005271 NM_003717	-72359	-	NM_134324	-78379	+	TSC_hg19_v1_chr12_+_53895135 AK309569 U08998 AK290737 AK293728 AB464283 BT007140 DQ893549 DQ893931	-78627	+	AB463398 X57197 NM_001130059	21038	-	TSC_hg19_v1_chr12_-_54019764 BC042363 NM_001206683	45980	-	TSC_hg19_v1_chr12_-_54020167 BC136302 X52943 AK298853 AK313507 BC032433 BC140006 NM_001130060 NM_001206682 NM_006856	46398	-	BC104234|NPFF|8620|neuropeptide FF-amide peptide precursor##BC104235|NPFF|8620|neuropeptide FF-amide peptide precursor##AF005271|NPFF|8620|neuropeptide FF-amide peptide precursor##NM_003717|NPFF|8620|neuropeptide FF-amide peptide precursor##NM_134324|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##AK309569|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##U08998|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##AK290737|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##BT007140|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##DQ893549|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##DQ893931|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##X57197|ATF7|11016|activating transcription factor 7##NM_001130059|ATF7|11016|activating transcription factor 7##BC042363|ATF7|11016|activating transcription factor 7##NM_001206683|ATF7|11016|activating transcription factor 7##BC136302|ATF7|11016|activating transcription factor 7##X52943|ATF7|11016|activating transcription factor 7##AK298853|ATF7|11016|activating transcription factor 7##AK313507|ATF7|11016|activating transcription factor 7##BC032433|ATF7|11016|activating transcription factor 7##BC140006|ATF7|11016|activating transcription factor 7##NM_001130060|ATF7|11016|activating transcription factor 7##NM_001206682|ATF7|11016|activating transcription factor 7##NM_006856|ATF7|11016|activating transcription factor 7	0.027446	
chr5	7805610	7805729	reg1030041.p1	5.201	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	-409401	+	AK308405 NM_001171806 AK303516	-1059547	+	NM_001171805 NM_006999 AF089896 BC084567	-1090919	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	45590	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	63463	-	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	63590	+	NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase	0.993931	CTCF.p2:21:0.994
chr7	105697399	105697504	reg1000856.p1	5.201	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	-93753	+	TSC_hg19_v1_chr7_+_105517250 AK125261	-180187	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	-180466	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	55230	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	55293	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	55564	-	NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3##AK125261|CDHR3|222256|cadherin-related family member 3##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##X61382|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1	0.0	
chr9	129961328	129961508	reg1000030.p1	5.201	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-76388	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-76456	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-76510	-	NM_032293 AK293732 AK095679	65389	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	198028	+	TSC_hg19_v1_chr9_-_130186602 AK124330	225148	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.0	
chr10	73648677	73648857	reg1027997.p1	5.200	+	TSC_hg19_v1_chr10_-_73611059 NM_001042465 NM_001042466 NM_002778	-37676	-	AK299184 TSC_hg19_v1_chr10_-_73611043	-37724	-	AK223290 AK293672 AK307721 TSC_hg19_v1_chr10_-_73611007 AK129790 J03077 AK057878 BC091483	-37750	-	TSC_hg19_v1_chr10_+_73723993 AB017915 NM_004273 AB012192	75290	+	AK292328 TSC_hg19_v1_chr10_-_73848270 AK294008 AK307091	199501	-	TSC_hg19_v1_chr10_-_73848286 AY358921	199515	-	NM_001042465|PSAP|5660|prosaposin##NM_001042466|PSAP|5660|prosaposin##NM_002778|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin##AK223290|PSAP|5660|prosaposin##AK293672|PSAP|5660|prosaposin##AK307721|PSAP|5660|prosaposin##AK129790|PSAP|5660|prosaposin##J03077|PSAP|5660|prosaposin##AK057878|PSAP|5660|prosaposin##BC091483|PSAP|5660|prosaposin##AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AY358921|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	0.0	
chr4	104400018	104400169	reg1028141.p1	5.200	+	AB527246 AB209996 TSC_hg19_v1_chr4_-_104119535 AK290362 NM_001813 Z15005	-280573	-	AK128463 TSC_hg19_v1_chr4_-_104020987 AF164790 AK023323 AK290160 AK291335 AK300626 BC037277 BC095414 AY358841 BC001953 NM_020139	-379093	-	NM_178833	-401924	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	240807	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	1012389	-	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	1015960	-	AB209996|CENPE|1062|centromere protein E, 312kDa##AK290362|CENPE|1062|centromere protein E, 312kDa##NM_001813|CENPE|1062|centromere protein E, 312kDa##Z15005|CENPE|1062|centromere protein E, 312kDa##AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_178833|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##AK127778|CXXC4|80319|CXXC finger protein 4	0.501932	CTCF.p2:-7:0.502
chr4	165669661	165669784	reg1026973.p2	5.200	+	AK289711 NM_001166373	-365316	-	NM_012403	-550860	-	AB463878 AK000675 AK301408 NM_017923	-1135007	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	208380	+	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	208429	+	BC089393 NM_001012414	229095	-	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61	0.97706	CTCF.p2:0:0.977
chr5	133897577	133897703	reg1024138.p2	5.200	+	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	-35835	+	TSC_hg19_v1_chr5_+_133861359 AK056471 BC021962 AK292635 AK074123	-36277	+	TSC_hg19_v1_chr5_+_133842276 BC032795	-55350	+	BC002847 TSC_hg19_v1_chr5_-_133968519 AK223452 AF092130 BC093034 NM_001033503 NM_016103	70857	-	TSC_hg19_v1_chr5_+_133984493 AK304060 NM_001252231 NM_021982 BC019341	86791	+	TSC_hg19_v1_chr5_+_134074237 NM_001745 BC130325 AK313156 BC063532 U18242 AB590695 HQ258172 AF068179	176670	+	D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15##AK056471|PHF15|23338|PHD finger protein 15##BC021962|PHF15|23338|PHD finger protein 15##AK292635|PHF15|23338|PHD finger protein 15##AK074123|PHF15|23338|PHD finger protein 15##BC002847|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK223452|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AF092130|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##BC093034|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_001033503|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_016103|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001252231|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001745|CAMLG|819|calcium modulating ligand##BC130325|CAMLG|819|calcium modulating ligand##AK313156|CAMLG|819|calcium modulating ligand##BC063532|CAMLG|819|calcium modulating ligand##U18242|CAMLG|819|calcium modulating ligand##HQ258172|CAMLG|819|calcium modulating ligand##AF068179|CAMLG|819|calcium modulating ligand	0.988643	CTCF.p2:-3:0.989
chr1	235151666	235151846	reg1023497.p2	5.199	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-255982	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-406510	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-407898	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	140333	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	140475	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	172807	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr14	26007176	26007284	reg1026510.p2	5.199	+	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	-487992	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-903812	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-928369	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1059758	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	3228998	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	3229683	+	BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1	0.995821	CTCF.p2:18:0.996
chr3	195919243	195919390	reg1025830.p2	5.199	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-110300	-	TSC_hg19_v1_chr3_-_195808984 M11507	-110333	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-110355	-	BC034801 BC022078 NM_001039617 AK122907	18965	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	24078	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	95219	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr4	89447486	89447635	reg1029829.p1	5.199	+	TSC_hg19_v1_chr4_-_89444931 NM_001042616 NM_032906	-2608	-	TSC_hg19_v1_chr4_-_89444916 AB206972 BC007876 AK312082	-2639	-	TSC_hg19_v1_chr4_+_89378269 AY337518 NM_016323 AB027289 BC140716	-69238	+	AK296379 TSC_hg19_v1_chr4_+_89513611 AK289990 BC038960 D25215 NM_014606	66061	+	BC104883 TSC_hg19_v1_chr4_-_89618996 AL834329 AK054689 BC022544 NM_153757	171415	-	AB385402 AB020721 TSC_hg19_v1_chr4_-_89744384 AK027138 BC033006 BC086875 BC058029 AK296932 NM_001015045 AK091787 AX747185	296721	-	NM_001042616|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_032906|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AB206972|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##BC007876|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AK312082|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AY337518|HERC5|51191|hect domain and RLD 5##NM_016323|HERC5|51191|hect domain and RLD 5##AB027289|HERC5|51191|hect domain and RLD 5##BC140716|HERC5|51191|hect domain and RLD 5##AK296379|HERC3|8916|hect domain and RLD 3##AK289990|HERC3|8916|hect domain and RLD 3##BC038960|HERC3|8916|hect domain and RLD 3##D25215|HERC3|8916|hect domain and RLD 3##NM_014606|HERC3|8916|hect domain and RLD 3##BC104883|NAP1L5|266812|nucleosome assembly protein 1-like 5##AL834329|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK054689|NAP1L5|266812|nucleosome assembly protein 1-like 5##BC022544|NAP1L5|266812|nucleosome assembly protein 1-like 5##NM_153757|NAP1L5|266812|nucleosome assembly protein 1-like 5##AB020721|FAM13A|10144|family with sequence similarity 13, member A##AK027138|FAM13A|10144|family with sequence similarity 13, member A##BC033006|FAM13A|10144|family with sequence similarity 13, member A##BC086875|FAM13A|10144|family with sequence similarity 13, member A##BC058029|FAM13A|10144|family with sequence similarity 13, member A##AK296932|FAM13A|10144|family with sequence similarity 13, member A##NM_001015045|FAM13A|10144|family with sequence similarity 13, member A##AK091787|FAM13A|10144|family with sequence similarity 13, member A	0.992042	CTCF.p2:7:0.992
chr8	118341313	118341414	reg1025831.p1	5.199	+	NM_001172814 NM_173851	-194027	+	AK298294 NM_001172813 NM_001172815 AL713790	-378160	+	EF560713 NM_001172811	-378852	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	191595	+	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	191679	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	782598	-	NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##EF560713|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172811|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_080651|MED30|90390|mediator complex subunit 30##BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1	0.999838	CTCF.p2:2:1.000
chrX	111287383	111287487	reg1022685.p2	5.199	+	BC034811 NM_001195577	-162311	+	NM_001195576 NM_001195578	-168083	+	NM_001039210 NM_001099922 NM_001168385 NM_018466 TSC_hg19_v1_chrX_+_110924425 AK300394 AK302729 AK311608 AK312229 BC005336 AF220051 AK316306 AK316522 AK304712 AK302890	-363016	+	AF054568 NM_012471	38568	-	AK128465 NM_001004308	38817	+	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	635904	-	BC034811|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195577|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195576|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195578|LOC100329135|100329135|uncharacterized LOC100329135##NM_001039210|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_001099922|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_001168385|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##NM_018466|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK300394|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK302729|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK311608|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK312229|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##BC005336|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AF220051|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK316306|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK316522|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK304712|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AK302890|ALG13|79868|asparagine-linked glycosylation 13 homolog (S. cerevisiae)##AF054568|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##NM_012471|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##AK128465|ZCCHC16|340595|zinc finger, CCHC domain containing 16##NM_001004308|ZCCHC16|340595|zinc finger, CCHC domain containing 16##BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1	0.688052	CTCF.p2:-9:0.688
chrX	149085102	149085244	reg1026176.p1	5.199	+	AK313943 NM_001166400 NM_001166401 NM_005364 BC002455 BC012744	-75203	+	AK292272 AK313321 NM_001080790 BC002351 NM_005365	-221578	+	NM_001164415 NM_016153	-229448	+	L43575 TSC_hg19_v1_chrX_-_149106661 U66042 NM_001013845	21509	-	TSC_hg19_v1_chrX_+_149529838 AK302612	444660	+	TSC_hg19_v1_chrX_+_149531583 NM_001177465 AK294478	446389	+	AK313943|MAGEA8|4107|melanoma antigen family A, 8##NM_001166400|MAGEA8|4107|melanoma antigen family A, 8##NM_001166401|MAGEA8|4107|melanoma antigen family A, 8##NM_005364|MAGEA8|4107|melanoma antigen family A, 8##BC002455|MAGEA8|4107|melanoma antigen family A, 8##BC012744|MAGEA8|4107|melanoma antigen family A, 8##AK292272|MAGEA9|4108|melanoma antigen family A, 9##AK313321|MAGEA9|4108|melanoma antigen family A, 9##NM_001080790|MAGEA9B|728269|melanoma antigen family A, 9B##BC002351|MAGEA9|4108|melanoma antigen family A, 9##NM_005365|MAGEA9|4108|melanoma antigen family A, 9##NM_001164415|HSFX2|100130086|heat shock transcription factor family, X linked 2##NM_016153|HSFX1|100506164|heat shock transcription factor family, X linked 1##L43575|CXorf40B|541578|chromosome X open reading frame 40B##U66042|CXorf40B|541578|chromosome X open reading frame 40B##NM_001013845|CXorf40B|541578|chromosome X open reading frame 40B##AK302612|MAMLD1|10046|mastermind-like domain containing 1##NM_001177465|MAMLD1|10046|mastermind-like domain containing 1##AK294478|MAMLD1|10046|mastermind-like domain containing 1	0.670467	CTCF.p2:2:0.670
chr1	28980545	28980623	reg1024236.p1	5.197	+	BC011986 TSC_hg19_v1_chr1_-_28969617 U57693 X84002 AK310097 NM_001135218 NM_005644	-11004	-	NM_001193532 AK026009	-61568	+	BC033175 NM_152304 AK312176	-61842	+	TSC_hg19_v1_chr1_+_28995244 NM_006582 NM_024482 AK000892	14645	+	BC001473 AK315195 AK315436 AF173868 AF203694 AK023126 TSC_hg19_v1_chr1_+_28995361	14744	+	NM_001173128 NM_016258 BC002559 AK292581 TSC_hg19_v1_chr1_+_29063435	82699	+	BC011986|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##U57693|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##X84002|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##AK310097|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##NM_001135218|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##NM_005644|TAF12|6883|TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20kDa##NM_001193532|RAB42|115273|RAB42, member RAS oncogene family##BC033175|RAB42|115273|RAB42, member RAS oncogene family##NM_152304|RAB42|115273|RAB42, member RAS oncogene family##AK312176|RAB42|115273|RAB42, member RAS oncogene family##NM_006582|GMEB1|10691|glucocorticoid modulatory element binding protein 1##NM_024482|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK000892|GMEB1|10691|glucocorticoid modulatory element binding protein 1##BC001473|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK315195|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK315436|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AF173868|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AF203694|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK023126|GMEB1|10691|glucocorticoid modulatory element binding protein 1##NM_001173128|YTHDF2|51441|YTH domain family, member 2##NM_016258|YTHDF2|51441|YTH domain family, member 2##BC002559|YTHDF2|51441|YTH domain family, member 2##AK292581|YTHDF2|51441|YTH domain family, member 2	0.978882	CTCF.p2:-17:0.855
chr15	59590584	59590760	reg1023518.p2	5.197	+	AY642121 BC022034 AY009108 NM_033195 AK312777 AK058192	-91620	+	TSC_hg19_v1_chr15_+_59397344 NM_004701 AK001404 AL080146 BC105086 BC105112 AF087910 AK222611 AB020981 AF002822 AB587333 AM393577 BT019458 CR533527	-193301	+	TSC_hg19_v1_chr15_+_59359061 AK095327	-231594	+	AB290177 TSC_hg19_v1_chr15_-_59665055	74382	-	TSC_hg19_v1_chr15_-_59665065 AK291688	74394	-	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	74398	-	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B##BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_004701|CCNB2|9133|cyclin B2##AK001404|CCNB2|9133|cyclin B2##AL080146|CCNB2|9133|cyclin B2##BC105086|CCNB2|9133|cyclin B2##BC105112|CCNB2|9133|cyclin B2##AF087910|CCNB2|9133|cyclin B2##AK222611|CCNB2|9133|cyclin B2##AB020981|CCNB2|9133|cyclin B2##AF002822|CCNB2|9133|cyclin B2##AM393577|CCNB2|9133|cyclin B2##BT019458|CCNB2|9133|cyclin B2##CR533527|CCNB2|9133|cyclin B2##AK095327|RNF111|54778|ring finger protein 111##AB290177|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE	0.0	
chrX	142747526	142747642	reg1029196.p1	5.197	+	TSC_hg19_v1_chrX_-_142723922 NM_001184749	-23661	-	TSC_hg19_v1_chrX_-_142722880 BC040986 NM_173078	-24641	-	AK315044 NM_001184750	-25266	-	NM_001009615	56931	-	GU727624 NM_001012989	219588	+	DQ336118 DQ336119 DQ336120 DQ336121 NM_001009614	1581522	+	NM_001184749|SLITRK4|139065|SLIT and NTRK-like family, member 4##BC040986|SLITRK4|139065|SLIT and NTRK-like family, member 4##NM_173078|SLITRK4|139065|SLIT and NTRK-like family, member 4##AK315044|SLITRK4|139065|SLIT and NTRK-like family, member 4##NM_001184750|SLITRK4|139065|SLIT and NTRK-like family, member 4##NM_001009615|SPANXN2|494119|SPANX family, member N2##GU727624|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like##NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like##DQ336118|SPANXN1|494118|SPANX family, member N1##DQ336119|SPANXN1|494118|SPANX family, member N1##DQ336120|SPANXN1|494118|SPANX family, member N1##DQ336121|SPANXN1|494118|SPANX family, member N1##NM_001009614|SPANXN1|494118|SPANX family, member N1	0.729442	CTCF.p2:-5:0.691
chr10	102754154	102754249	reg1025126.p2	5.196	+	TSC_hg19_v1_chr10_+_102747299 AK308098 NM_001163812 NM_001163813 NM_001163814 NM_021830 AK297068 BX640829	-6887	+	CU677499 CU690928 CU690970 CU691974 BC041165 BC052639 BC053373 AK291069 TSC_hg19_v1_chr10_-_102747255 AB049656 AK095556 AK300237 BC015905 NM_032112 NM_176792 NM_176793 NM_176794	-6966	-	AF086122 TSC_hg19_v1_chr10_-_102747046 BC031287	-7159	-	TSC_hg19_v1_chr10_+_102756830 NM_032429 BC006212	2695	+	TSC_hg19_v1_chr10_+_102758072 AK298208	3905	+	AB058716 TSC_hg19_v1_chr10_+_102759264	5047	+	AK308098|C10orf2|56652|chromosome 10 open reading frame 2##NM_001163812|C10orf2|56652|chromosome 10 open reading frame 2##NM_001163813|C10orf2|56652|chromosome 10 open reading frame 2##NM_001163814|C10orf2|56652|chromosome 10 open reading frame 2##NM_021830|C10orf2|56652|chromosome 10 open reading frame 2##AK297068|C10orf2|56652|chromosome 10 open reading frame 2##BX640829|C10orf2|56652|chromosome 10 open reading frame 2##BC041165|MRPL43|84545|mitochondrial ribosomal protein L43##BC052639|MRPL43|84545|mitochondrial ribosomal protein L43##BC053373|MRPL43|84545|mitochondrial ribosomal protein L43##AK291069|MRPL43|84545|mitochondrial ribosomal protein L43##AB049656|MRPL43|84545|mitochondrial ribosomal protein L43##AK095556|MRPL43|84545|mitochondrial ribosomal protein L43##AK300237|MRPL43|84545|mitochondrial ribosomal protein L43##BC015905|MRPL43|84545|mitochondrial ribosomal protein L43##NM_032112|MRPL43|84545|mitochondrial ribosomal protein L43##NM_176792|MRPL43|84545|mitochondrial ribosomal protein L43##NM_176793|MRPL43|84545|mitochondrial ribosomal protein L43##NM_176794|MRPL43|84545|mitochondrial ribosomal protein L43##AF086122|MRPL43|84545|mitochondrial ribosomal protein L43##BC031287|MRPL43|84545|mitochondrial ribosomal protein L43##NM_032429|LZTS2|84445|leucine zipper, putative tumor suppressor 2##BC006212|LZTS2|84445|leucine zipper, putative tumor suppressor 2##AK298208|LZTS2|84445|leucine zipper, putative tumor suppressor 2##AB058716|LZTS2|84445|leucine zipper, putative tumor suppressor 2	0.213919	CTCF.p2:-7:0.214
chr10	131767300	131767389	reg1021636.p2	5.196	+	TSC_hg19_v1_chr10_-_131762539 AK097335	-4819	-	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	-5291	-	TSC_hg19_v1_chr10_+_131265507 BC000824	-501830	+	TSC_hg19_v1_chr10_-_131909090 EU250747 AK094118	141737	-	TSC_hg19_v1_chr10_+_131934662 NM_001199868 NM_006541 BC005289 AK022131 AF118652	167311	+	TSC_hg19_v1_chr10_+_131934675 AF118649 AK225609	167331	+	AK097335|EBF3|253738|early B-cell factor 3##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##EU250747|LOC387723|387723|uncharacterized LOC387723##AK094118|LOC387723|387723|uncharacterized LOC387723##NM_001199868|GLRX3|10539|glutaredoxin 3##NM_006541|GLRX3|10539|glutaredoxin 3##BC005289|GLRX3|10539|glutaredoxin 3##AK022131|GLRX3|10539|glutaredoxin 3##AF118652|GLRX3|10539|glutaredoxin 3##AF118649|GLRX3|10539|glutaredoxin 3##AK225609|GLRX3|10539|glutaredoxin 3	0.0	
chr1	26019212	26019310	reg1022983.p1	5.196	+	AB209275 TSC_hg19_v1_chr1_+_25944698	-74606	+	AF261655 NM_020379	-75303	+	TSC_hg19_v1_chr1_+_25870146 BC029770 AL117654 AB528624	-149097	+	TSC_hg19_v1_chr1_+_26126678 AJ306399 NM_020451 NM_206926	107407	+	TSC_hg19_v1_chr1_+_26146429 NM_001099625 NM_001099627 BX647921	127149	+	TSC_hg19_v1_chr1_+_26146468 AB075880 AK314297 AK299221 AF173891	127210	+	AB209275|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##BC029770|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AL117654|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AJ306399|SEPN1|57190|selenoprotein N, 1##NM_020451|SEPN1|57190|selenoprotein N, 1##NM_206926|SEPN1|57190|selenoprotein N, 1##NM_001099625|FAM54B|56181|family with sequence similarity 54, member B##NM_001099627|FAM54B|56181|family with sequence similarity 54, member B##BX647921|FAM54B|56181|family with sequence similarity 54, member B##AB075880|FAM54B|56181|family with sequence similarity 54, member B##AK314297|FAM54B|56181|family with sequence similarity 54, member B##AK299221|FAM54B|56181|family with sequence similarity 54, member B##AF173891|FAM54B|56181|family with sequence similarity 54, member B	0.0	
chr15	65903564	65903691	reg1025778.p2	5.196	+	AL136662 TSC_hg19_v1_chr15_-_65903462 BC007991 AK296134 AK027475 AK301033 AK301742 AK310857 AK301222 AK293207 NM_001207058 NM_001207059	-111	-	TSC_hg19_v1_chr15_+_65822862 BC011443 AK027421 BC000194 AJ271091	-80704	+	TSC_hg19_v1_chr15_+_65822839 AK074898 AK299234 AF161470 BC058912 NM_016395 BC035508 BC047685 BC009056 AK225120	-80838	+	BC012630 TSC_hg19_v1_chr15_+_65903706 AB014602 BC029407 AK304006	28	+	AF062922 NM_004727	10642	+	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	180846	-	AL136662|C15orf44|81556|chromosome 15 open reading frame 44##BC007991|C15orf44|81556|chromosome 15 open reading frame 44##AK296134|C15orf44|81556|chromosome 15 open reading frame 44##AK027475|C15orf44|81556|chromosome 15 open reading frame 44##AK301033|C15orf44|81556|chromosome 15 open reading frame 44##AK301742|C15orf44|81556|chromosome 15 open reading frame 44##AK310857|C15orf44|81556|chromosome 15 open reading frame 44##AK301222|C15orf44|81556|chromosome 15 open reading frame 44##AK293207|C15orf44|81556|chromosome 15 open reading frame 44##NM_001207058|C15orf44|81556|chromosome 15 open reading frame 44##NM_001207059|C15orf44|81556|chromosome 15 open reading frame 44##BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##BC012630|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##AB014602|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##BC029407|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##AK304006|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A	0.473942	CTCF.p2:7:0.474
chr17	73257788	73257969	reg1026804.p2	5.196	+	TSC_hg19_v1_chr17_+_73257759 NM_015971 AK222995 BC000241 AF077042	-106	+	BC063285 TSC_hg19_v1_chr17_-_73257705 AK291651 NM_014001 NM_138619	-163	-	TSC_hg19_v1_chr17_-_73257688 AK293291 BC051732	-185	-	TSC_hg19_v1_chr17_+_73257959 AK313854	83	+	BC050641 TSC_hg19_v1_chr17_+_73258009	122	+	AK301895 AK302278 NM_001172703 NM_001172704	564	-	NM_015971|MRPS7|51081|mitochondrial ribosomal protein S7##AK222995|MRPS7|51081|mitochondrial ribosomal protein S7##BC000241|MRPS7|51081|mitochondrial ribosomal protein S7##AF077042|MRPS7|51081|mitochondrial ribosomal protein S7##BC063285|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK291651|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##NM_014001|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##NM_138619|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK293291|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##BC051732|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK313854|MRPS7|51081|mitochondrial ribosomal protein S7##BC050641|MRPS7|51081|mitochondrial ribosomal protein S7##AK301895|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##AK302278|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##NM_001172703|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3##NM_001172704|GGA3|23163|golgi-associated, gamma adaptin ear containing, ARF binding protein 3	0.0	
chr7	38389627	38389772	reg1027550.p2	5.196	+	TSC_hg19_v1_chr7_-_38389583 BC035592	-110	-	Y00482 TSC_hg19_v1_chr7_-_38389512	-223	-	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	-14495	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	281263	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	281378	-	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	559094	-	BC035592|TRGV5|6978|T cell receptor gamma variable 5##BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)	0.994853	CTCF.p2:-7:0.995
chr10	52127657	52127785	reg1026589.p2	5.195	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-119381	-	NM_018232	-289836	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-299999	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	255982	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	371989	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	517672	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.993837	CTCF.p2:-14:0.994
chr11	73801887	73802006	reg1027051.p1	5.195	+	NM_003356 NM_022803	-81665	-	TSC_hg19_v1_chr11_-_73694300 AK025742	-107603	-	TSC_hg19_v1_chr11_-_73693886 AK222540 AK222557 NM_003355	-108061	-	TSC_hg19_v1_chr11_-_73881923 AB231764 AK092089 AX747350 BC037429 NM_015531	80122	-	TSC_hg19_v1_chr11_+_73882299 AK022725	80336	+	TSC_hg19_v1_chr11_+_73882350 BC003046 BC050705 AK225647 AF157028 NM_016147 AK001381	80397	+	NM_003356|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##NM_022803|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##AK025742|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3##AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3##NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3##AK022725|PPME1|51400|protein phosphatase methylesterase 1##BC003046|PPME1|51400|protein phosphatase methylesterase 1##BC050705|PPME1|51400|protein phosphatase methylesterase 1##AK225647|PPME1|51400|protein phosphatase methylesterase 1##AF157028|PPME1|51400|protein phosphatase methylesterase 1##NM_016147|PPME1|51400|protein phosphatase methylesterase 1##AK001381|PPME1|51400|protein phosphatase methylesterase 1	0.102468	
chr13	114831294	114831389	reg1025006.p2	5.195	+	TSC_hg19_v1_chr13_-_114567041 NM_000820	-264298	-	TSC_hg19_v1_chr13_-_114567037 BC030708	-264305	-	TSC_hg19_v1_chr13_-_114567011 BC038984 L13720	-264320	-	AB385165 TSC_hg19_v1_chr13_-_114898005 AK289746 X89399	66645	-	TSC_hg19_v1_chr13_-_114898028 AK295861 AK313795	66684	-	TSC_hg19_v1_chr13_-_114898058 AK128094	66725	-	NM_000820|GAS6|2621|growth arrest-specific 6##BC030708|GAS6|2621|growth arrest-specific 6##BC038984|GAS6|2621|growth arrest-specific 6##L13720|GAS6|2621|growth arrest-specific 6##AK289746|RASA3|22821|RAS p21 protein activator 3##X89399|RASA3|22821|RAS p21 protein activator 3##AK295861|RASA3|22821|RAS p21 protein activator 3##AK313795|RASA3|22821|RAS p21 protein activator 3##AK128094|RASA3|22821|RAS p21 protein activator 3	0.0	
chr13	38992069	38992197	reg1028211.p1	5.195	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	-68084	+	NM_016617 TSC_hg19_v1_chr13_+_38923946	-68182	+	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	-548235	-	NM_207361	269039	+	DQ891676 EU176604 AK313632 BC025760 AK304159 NM_001144033 NM_145286	572793	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	620068	-	AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2##DQ891676|STOML3|161003|stomatin (EPB72)-like 3##EU176604|STOML3|161003|stomatin (EPB72)-like 3##AK313632|STOML3|161003|stomatin (EPB72)-like 3##BC025760|STOML3|161003|stomatin (EPB72)-like 3##AK304159|STOML3|161003|stomatin (EPB72)-like 3##NM_001144033|STOML3|161003|stomatin (EPB72)-like 3##NM_145286|STOML3|161003|stomatin (EPB72)-like 3##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1	0.279799	CTCF.p2:1:0.247
chr1	86885099	86885215	reg1026853.p1	5.195	+	BC091490 TSC_hg19_v1_chr1_-_86862004 AB033055 BC047368 BC009779 BC012579 AK308351 AK302792 BC026105 AK303209 NM_001007022 NM_001184765 NM_001184766 NM_020729	-23182	-	BC116180 BC113654 BC117170 BC143715 BC143717 BC143718 AY244357 NM_152890	-263044	-	TSC_hg19_v1_chr1_-_86174088 AL442074 BC026236 AK298149 NM_001170670 NM_017953	-711044	-	NM_006536 AF043977 AK296719 AK290348 AK307937 BC041096 AB026833 AF127980	4692	+	NM_001285 TSC_hg19_v1_chr1_+_86934607 AK314375 AK291999 AK097057 AF127036	49430	+	NM_012128 AK000072 AK314430 BC113687 BC113689 AF127035 AY358470 HQ258531 AK307785 AK307898 AK293766	127684	+	BC091490|ODF2L|57489|outer dense fiber of sperm tails 2-like##AB033055|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC047368|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC009779|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC012579|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK308351|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK302792|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC026105|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK303209|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001007022|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184765|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184766|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_020729|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC116180|COL24A1|255631|collagen, type XXIV, alpha 1##BC113654|COL24A1|255631|collagen, type XXIV, alpha 1##BC117170|COL24A1|255631|collagen, type XXIV, alpha 1##BC143715|COL24A1|255631|collagen, type XXIV, alpha 1##BC143717|COL24A1|255631|collagen, type XXIV, alpha 1##BC143718|COL24A1|255631|collagen, type XXIV, alpha 1##AY244357|COL24A1|255631|collagen, type XXIV, alpha 1##NM_152890|COL24A1|255631|collagen, type XXIV, alpha 1##AL442074|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC026236|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK298149|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_001170670|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_017953|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_006536|CLCA2|9635|chloride channel accessory 2##AF043977|CLCA2|9635|chloride channel accessory 2##AK290348|CLCA2|9635|chloride channel accessory 2##AK307937|CLCA2|9635|chloride channel accessory 2##BC041096|CLCA2|9635|chloride channel accessory 2##AB026833|CLCA2|9635|chloride channel accessory 2##AF127980|CLCA2|9635|chloride channel accessory 2##NM_001285|CLCA1|1179|chloride channel accessory 1##AK314375|CLCA1|1179|chloride channel accessory 1##AK291999|CLCA1|1179|chloride channel accessory 1##AK097057|CLCA1|1179|chloride channel accessory 1##AF127036|CLCA1|1179|chloride channel accessory 1##NM_012128|CLCA4|22802|chloride channel accessory 4##AK000072|CLCA4|22802|chloride channel accessory 4##AK314430|CLCA4|22802|chloride channel accessory 4##BC113687|CLCA4|22802|chloride channel accessory 4##BC113689|CLCA4|22802|chloride channel accessory 4##AF127035|CLCA4|22802|chloride channel accessory 4##AY358470|CLCA4|22802|chloride channel accessory 4##HQ258531|CLCA4|22802|chloride channel accessory 4##AK307785|CLCA4|22802|chloride channel accessory 4##AK307898|CLCA4|22802|chloride channel accessory 4##AK293766|CLCA4|22802|chloride channel accessory 4	0.327079	CTCF.p2:-4:0.327
chr20	3869306	3869411	reg1023798.p1	5.195	+	TSC_hg19_v1_chr20_+_3827524 NM_001206491 NM_020746 AK296897 AB097003 AK123956 AK291785 BX649084 AK023799 AX775775 BC044952 AK130992	-41862	+	TSC_hg19_v1_chr20_+_3801202 NM_001204446 NM_001204447 NM_018347 BC011985 AK002030 AK093332 BC043344	-68160	+	TSC_hg19_v1_chr20_+_3776956 S78187 Z68092 BC006395 M81934	-92353	+	AK021791 NM_024960 TSC_hg19_v1_chr20_+_3869569	174	+	TSC_hg19_v1_chr20_+_3869593 AF494409 NM_153638	309	+	TSC_hg19_v1_chr20_-_3869721 BC005095 BC012193	360	-	NM_001206491|MAVS|57506|mitochondrial antiviral signaling protein##NM_020746|MAVS|57506|mitochondrial antiviral signaling protein##AK296897|MAVS|57506|mitochondrial antiviral signaling protein##AB097003|MAVS|57506|mitochondrial antiviral signaling protein##AK123956|MAVS|57506|mitochondrial antiviral signaling protein##AK291785|MAVS|57506|mitochondrial antiviral signaling protein##BX649084|MAVS|57506|mitochondrial antiviral signaling protein##AK023799|MAVS|57506|mitochondrial antiviral signaling protein##BC044952|MAVS|57506|mitochondrial antiviral signaling protein##AK130992|MAVS|57506|mitochondrial antiviral signaling protein##NM_001204446|C20orf29|55317|chromosome 20 open reading frame 29##NM_001204447|C20orf29|55317|chromosome 20 open reading frame 29##NM_018347|C20orf29|55317|chromosome 20 open reading frame 29##BC011985|C20orf29|55317|chromosome 20 open reading frame 29##AK002030|C20orf29|55317|chromosome 20 open reading frame 29##AK093332|C20orf29|55317|chromosome 20 open reading frame 29##BC043344|C20orf29|55317|chromosome 20 open reading frame 29##S78187|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##Z68092|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BC006395|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##M81934|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##AK021791|PANK2|80025|pantothenate kinase 2##NM_024960|PANK2|80025|pantothenate kinase 2##AF494409|PANK2|80025|pantothenate kinase 2##NM_153638|PANK2|80025|pantothenate kinase 2	0.636463	CTCF.p2:0:0.636
chr4	11425603	11425784	reg1002841.p1	5.195	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-739292	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-966683	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-1307157	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	4839	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2060258	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2060282	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr10	70865216	70865396	reg1026319.p1	5.194	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	-17422	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	-17470	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-116771	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	18585	+	TSC_hg19_v1_chr10_+_70883933 BX649092 AK315496	18627	+	AK297142 TSC_hg19_v1_chr10_+_70883939	18634	+	D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_002727|SRGN|5552|serglycin##NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BX649092|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK315496|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK297142|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.0	
chr12	52699977	52700107	reg1032175.p1	5.194	+	NM_002284 BC069585 CU686916 X99142	-4364	+	AB527612 HQ258431 BC117465 BC117467 NM_002281	-14769	-	TSC_hg19_v1_chr12_+_52627029 AK025881 AK128848 AF509887 AJ238246 X03212 AK128505 AK225498 BC002700 DQ892996 DQ896244 AB590146 CU678130	-72999	+	BC126935 BC128063 BC069546 X99141 AK314904 NM_002282	15118	-	X99140 NM_002283	61239	-	AJ628420 BC069647 NM_033045 AK314030	79356	-	NM_002284|KRT86|3892|keratin 86##BC069585|KRT86|3892|keratin 86##X99142|KRT86|3892|keratin 86##HQ258431|KRT81|3887|keratin 81##BC117465|KRT81|3887|keratin 81##BC117467|KRT81|3887|keratin 81##NM_002281|KRT81|3887|keratin 81##AK025881|KRT7|3855|keratin 7##AK128848|KRT7|3855|keratin 7##AF509887|KRT7|3855|keratin 7##AJ238246|KRT7|3855|keratin 7##X03212|KRT7|3855|keratin 7##AK128505|KRT7|3855|keratin 7##AK225498|KRT7|3855|keratin 7##BC002700|KRT7|3855|keratin 7##DQ892996|KRT7|3855|keratin 7##DQ896244|KRT7|3855|keratin 7##BC126935|KRT83|3889|keratin 83##BC128063|KRT83|3889|keratin 83##BC069546|KRT83|3889|keratin 83##X99141|KRT83|3889|keratin 83##AK314904|KRT83|3889|keratin 83##NM_002282|KRT83|3889|keratin 83##X99140|KRT85|3891|keratin 85##NM_002283|KRT85|3891|keratin 85##AJ628420|KRT84|3890|keratin 84##BC069647|KRT84|3890|keratin 84##NM_033045|KRT84|3890|keratin 84##AK314030|KRT84|3890|keratin 84	0.773131	CTCF.p2:-9:0.773
chr15	25006970	25007110	reg1032642.p1	5.194	+	AB527113 TSC_hg19_v1_chr15_+_24921043	-86011	+	NM_018958	-86500	+	TSC_hg19_v1_chr15_-_23932453 U35139 BC008750 AK312779 AK129654 NM_002487	-1074608	-	L80005 NM_022806 NM_022807 NM_022808	61753	+	TSC_hg19_v1_chr15_+_25093355 BC035402	86389	+	L80004 NM_022805 TSC_hg19_v1_chr15_+_25101717 AK222633 BC035280	94673	+	NM_018958|C15orf2|23742|chromosome 15 open reading frame 2##U35139|NDN|4692|necdin homolog (mouse)##BC008750|NDN|4692|necdin homolog (mouse)##AK312779|NDN|4692|necdin homolog (mouse)##AK129654|NDN|4692|necdin homolog (mouse)##NM_002487|NDN|4692|necdin homolog (mouse)##L80005|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N##NM_022806|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N##NM_022807|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N##NM_022808|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N##L80004|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N##NM_022805|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N##AK222633|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N##BC035280|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N	0.636024	CTCF.p2:0:0.636
chr17	9885616	9885727	reg1022981.p1	5.194	+	AJ224876 NM_003644 AK293834 AK315162	-22900	-	AB001838 BT009838 AB528320 DQ892822 DQ896068 BC001720 S62028 S45545 AB593156 NM_002903 S43855	-77082	-	TSC_hg19_v1_chr17_+_9745847 BC041176 BC019818	-139812	+	AB385324 BT006891 DQ892802 DQ895910 CU674584 AB209030 AK294829 TSC_hg19_v1_chr17_-_9923322	37592	-	TSC_hg19_v1_chr17_-_9923331 AK309722	37721	-	TSC_hg19_v1_chr17_-_9929603 AB007854 AK225165 AK299574 NM_001130831	43950	-	AJ224876|GAS7|8522|growth arrest-specific 7##NM_003644|GAS7|8522|growth arrest-specific 7##AK293834|GAS7|8522|growth arrest-specific 7##AK315162|GAS7|8522|growth arrest-specific 7##AB001838|RCVRN|5957|recoverin##BT009838|RCVRN|5957|recoverin##DQ892822|RCVRN|5957|recoverin##DQ896068|RCVRN|5957|recoverin##BC001720|RCVRN|5957|recoverin##S62028|RCVRN|5957|recoverin##S45545|RCVRN|5957|recoverin##AB593156|RCVRN|5957|recoverin##NM_002903|RCVRN|5957|recoverin##S43855|RCVRN|5957|recoverin##BC041176|GLP2R|9340|glucagon-like peptide 2 receptor##BC019818|GLP2R|9340|glucagon-like peptide 2 receptor##BT006891|GAS7|8522|growth arrest-specific 7##DQ892802|GAS7|8522|growth arrest-specific 7##DQ895910|GAS7|8522|growth arrest-specific 7##AB209030|GAS7|8522|growth arrest-specific 7##AK294829|GAS7|8522|growth arrest-specific 7##AK309722|GAS7|8522|growth arrest-specific 7##AB007854|GAS7|8522|growth arrest-specific 7##AK225165|GAS7|8522|growth arrest-specific 7##AK299574|GAS7|8522|growth arrest-specific 7##NM_001130831|GAS7|8522|growth arrest-specific 7	0.998732	CTCF.p2:10:0.999
chr19	1438205	1438361	reg1026811.p1	5.194	+	TSC_hg19_v1_chr19_+_1407754 AB528000 EU446950 CU680190	-30516	+	AF181719 TSC_hg19_v1_chr19_+_1407665 AL360261 BC012062	-30591	+	TSC_hg19_v1_chr19_+_1407556 NM_018959 NM_170711	-30723	+	TSC_hg19_v1_chr19_+_1438371 NM_001018 BC105810 J02984	82	+	TSC_hg19_v1_chr19_+_1438400 AB055776 BC080543	119	+	TSC_hg19_v1_chr19_+_1438421 BC064908 BC141832	146	+	EU446950|DAZAP1|26528|DAZ associated protein 1##AF181719|DAZAP1|26528|DAZ associated protein 1##AL360261|DAZAP1|26528|DAZ associated protein 1##BC012062|DAZAP1|26528|DAZ associated protein 1##NM_018959|DAZAP1|26528|DAZ associated protein 1##NM_170711|DAZAP1|26528|DAZ associated protein 1##NM_001018|RPS15|6209|ribosomal protein S15##BC105810|RPS15|6209|ribosomal protein S15##J02984|RPS15|6209|ribosomal protein S15##BC080543|RPS15|6209|ribosomal protein S15##BC064908|RPS15|6209|ribosomal protein S15##BC141832|RPS15|6209|ribosomal protein S15	0.255311	CTCF.p2:3:0.203
chr19	43715034	43715197	reg1027280.p1	5.194	+	U18468 U18469 M94891 X17097 BC008405 BC013431 BC063127 NM_002780 NM_213633 AK075149	-5360	-	AB527988 EU831982 EU832075 M73713 M25384 BC012607 NM_001130014 NM_002781	-24493	-	DQ891359 EU832659 EU832736 M20882 AK002132 BC022316 NM_031246	-128308	-	CR407605 CU676704 DQ891385 DQ894561 U25987 M34481 M94890 M58591 M34421 X17610 AK300187 AK300229 BC005925 BC020759 AK313256 NM_002784	58516	-	NM_020406 AF146747 AK290965 TSC_hg19_v1_chr19_+_43857837 AJ290452 AJ310433 AK225226 AM884905 BC029167 AY358932 AB237911 AB527936 CU688610 DQ892045 DQ895239 AJ305326 BT020111	142730	+	AF241268 NM_031451	177647	+	U18468|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##U18469|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##M94891|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##X17097|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC013431|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC063127|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##NM_002780|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##NM_213633|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK075149|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##EU831982|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##EU832075|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M73713|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M25384|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##BC012607|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_001130014|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_002781|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##DQ891359|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832659|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832736|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M20882|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##BC022316|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##NM_031246|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##CR407605|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##DQ891385|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##DQ894561|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##U25987|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M34481|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M94890|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M58591|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M34421|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##X17610|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK300187|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK300229|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##BC005925|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##BC020759|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK313256|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##NM_002784|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##NM_020406|CD177|57126|CD177 molecule##AF146747|CD177|57126|CD177 molecule##AK290965|CD177|57126|CD177 molecule##AJ290452|CD177|57126|CD177 molecule##AJ310433|CD177|57126|CD177 molecule##AK225226|CD177|57126|CD177 molecule##AM884905|CD177|57126|CD177 molecule##BC029167|CD177|57126|CD177 molecule##AY358932|CD177|57126|CD177 molecule##AB237911|CD177|57126|CD177 molecule##DQ892045|CD177|57126|CD177 molecule##DQ895239|CD177|57126|CD177 molecule##AJ305326|CD177|57126|CD177 molecule##BT020111|CD177|57126|CD177 molecule##AF241268|TEX101|83639|testis expressed 101##NM_031451|TEX101|83639|testis expressed 101	0.694154	CTCF.p2:17:0.694
chr20	2383421	2383524	reg1026673.p2	5.194	+	AF540969 AF540970 NM_198994	-21919	+	NM_003245 AK298637 AK299447 AK308249 AK290324 AK291351 AK315236 L10386 BC109075 BC109076	-106823	+	TSC_hg19_v1_chr20_-_2083527 BC034792	-299946	-	TSC_hg19_v1_chr20_-_2451416 X17568 X17567 BC080516	67918	-	TSC_hg19_v1_chr20_-_2451436 AK301034 AK312620 AK301206 AK307093 AK307266	67960	-	TSC_hg19_v1_chr20_-_2451439 BC003530 J04564 NM_003091 NM_198216	68001	-	AF540969|TGM6|343641|transglutaminase 6##AF540970|TGM6|343641|transglutaminase 6##NM_198994|TGM6|343641|transglutaminase 6##NM_003245|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK298637|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK299447|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK308249|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK290324|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291351|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK315236|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##L10386|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109075|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC109076|TGM3|7053|transglutaminase 3 (E polypeptide, protein-glutamine-gamma-glutamyltransferase)##X17568|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##X17567|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##BC080516|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK301034|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK312620|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK301206|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##AK307093|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##BC003530|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##J04564|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##NM_003091|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1##NM_198216|SNRPB|6628|small nuclear ribonucleoprotein polypeptides B and B1	0.415336	CTCF.p2:-7:0.415
chr20	2694044	2694157	reg1026536.p2	5.194	+	TSC_hg19_v1_chr20_+_2673520 AB037863 NM_001110514	-20418	+	TSC_hg19_v1_chr20_-_2644844 BC019037 CU674954 DQ892561 DQ895776 DQ895816 EU831924 EU832019 AK001905 BC001960 NM_006899 NM_174855 NM_174856 AK309488 AK315641 AK300485	-49266	-	AL050094 TSC_hg19_v1_chr20_-_2641583	-52564	-	AK027661 BC032692 AY358956 TSC_hg19_v1_chr20_-_2781253	87143	-	AK075527 BC063430 AK075508 TSC_hg19_v1_chr20_-_2781274 AK315027 NM_001184699 NM_019609	87183	-	AK129653 AK312218 BC014591 NM_080739 AL713708	101546	+	AB037863|EBF4|57593|early B-cell factor 4##NM_001110514|EBF4|57593|early B-cell factor 4##BC019037|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ892561|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ895776|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ895816|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##EU831924|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##EU832019|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK001905|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##BC001960|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_006899|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_174855|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_174856|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK309488|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK315641|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK300485|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK027661|CPXM1|56265|carboxypeptidase X (M14 family), member 1##BC032692|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AY358956|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK075527|CPXM1|56265|carboxypeptidase X (M14 family), member 1##BC063430|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK075508|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK315027|CPXM1|56265|carboxypeptidase X (M14 family), member 1##NM_001184699|CPXM1|56265|carboxypeptidase X (M14 family), member 1##NM_019609|CPXM1|56265|carboxypeptidase X (M14 family), member 1##AK312218|C20orf141|128653|chromosome 20 open reading frame 141##BC014591|C20orf141|128653|chromosome 20 open reading frame 141##NM_080739|C20orf141|128653|chromosome 20 open reading frame 141##AL713708|C20orf141|128653|chromosome 20 open reading frame 141	0.276772	CTCF.p2:-12:0.277
chr3	15404130	15404237	reg1024154.p1	5.194	+	BC006169 NM_001018009	-21296	-	TSC_hg19_v1_chr3_-_15374094 AL117422 AK313167 NM_004844	-30086	-	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	-30242	-	TSC_hg19_v1_chr3_-_15469037 BC022400 AK057791 NM_152396 AK293370	64835	-	TSC_hg19_v1_chr3_+_15469073 NM_033083 AK312330 AK304697 BC041329 AF272973 CU691982	64985	+	AK128401 NM_080538	136195	-	BC006169|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_001018009|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AL117422|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AK313167|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_004844|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC022400|METTL6|131965|methyltransferase like 6##AK057791|METTL6|131965|methyltransferase like 6##NM_152396|METTL6|131965|methyltransferase like 6##AK293370|METTL6|131965|methyltransferase like 6##NM_033083|EAF1|85403|ELL associated factor 1##AK312330|EAF1|85403|ELL associated factor 1##AK304697|EAF1|85403|ELL associated factor 1##BC041329|EAF1|85403|ELL associated factor 1##AF272973|EAF1|85403|ELL associated factor 1##AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	0.421833	CTCF.p2:-2:0.422
chr7	142115742	142115846	reg1026654.p1	5.194	+	AY358487 BC035384 AK122940 NM_001001317	-157933	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-304255	+	AF016833 NM_004668 BC120872	-420102	+	NM_001190487	258336	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	341532	+	M12426 TSC_hg19_v1_chr7_+_142495248	379401	+	AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	0.999695	CTCF.p2:-2:1.000
chr8	8436042	8436184	reg1024614.p1	5.194	+	AK122582 NM_001080826	-196891	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-260225	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-349971	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	123585	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	314825	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	424252	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.984803	CTCF.p2:14:0.985
chrX	151955728	151955827	reg1027335.p1	5.194	+	BC017389 BC016803 BC000340 AK292384 BC005963 NM_005362	-17561	-	AF080246 AF136715 NM_001080848 NM_001129828 NM_004909 BC119735 BC119734 NM_001129826	-28006	+	BC109188 NM_005361 NM_175742 NM_175743 BC108720 AK290443	-33409	-	TSC_hg19_v1_chrX_-_151999272 AK311940 BC013873 BC005334 NM_004344 X72964	43504	-	NM_001129765 NM_015922 U47105 BC007816 TSC_hg19_v1_chrX_+_151999551	43757	+	TSC_hg19_v1_chrX_+_151999576 BC000245	43800	+	BC017389|MAGEA3|4102|melanoma antigen family A, 3##BC016803|MAGEA3|4102|melanoma antigen family A, 3##BC000340|MAGEA3|4102|melanoma antigen family A, 3##AK292384|MAGEA3|4102|melanoma antigen family A, 3##BC005963|MAGEA3|4102|melanoma antigen family A, 3##NM_005362|MAGEA3|4102|melanoma antigen family A, 3##AF080246|CSAG3|389903|CSAG family, member 3##AF136715|CSAG3|389903|CSAG family, member 3##NM_001080848|CSAG2|728461|CSAG family, member 2##NM_001129828|CSAG3|389903|CSAG family, member 3##NM_004909|CSAG2|728461|CSAG family, member 2##BC119735|CSAG3|389903|CSAG family, member 3##BC119734|CSAG3|389903|CSAG family, member 3##NM_001129826|CSAG3|389903|CSAG family, member 3##BC109188|MAGEA2|4101|melanoma antigen family A, 2##NM_005361|MAGEA2|4101|melanoma antigen family A, 2##NM_175742|MAGEA2|4101|melanoma antigen family A, 2##NM_175743|MAGEA2|4101|melanoma antigen family A, 2##BC108720|MAGEA2|4101|melanoma antigen family A, 2##AK290443|MAGEA2|4101|melanoma antigen family A, 2##AK311940|CETN2|1069|centrin, EF-hand protein, 2##BC013873|CETN2|1069|centrin, EF-hand protein, 2##BC005334|CETN2|1069|centrin, EF-hand protein, 2##NM_004344|CETN2|1069|centrin, EF-hand protein, 2##X72964|CETN2|1069|centrin, EF-hand protein, 2##NM_001129765|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##NM_015922|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##U47105|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##BC007816|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like##BC000245|NSDHL|50814|NAD(P) dependent steroid dehydrogenase-like	1.758488	CTCF.p2:5:0.984	CTCF.p2:-17:0.775
chr12	117197614	117197737	reg1028699.p2	5.193	+	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	-21556	+	TSC_hg19_v1_chr12_-_117175868 AK222983 AK298857	-21806	-	TSC_hg19_v1_chr12_-_117175822 AK309652 BC019843 AK025068 NM_024738	-21937	-	NM_003806 U76376	121556	-	TSC_hg19_v1_chr12_+_117348781 BC037296 NM_012174 NM_153348 AK289621 AF176707 BC075823	151111	+	DQ894644 TSC_hg19_v1_chr12_-_117537222 AF443207 BC015221 NM_001168325 NM_017899 AK000614	339588	-	NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2##AK222983|C12orf49|79794|chromosome 12 open reading frame 49##AK298857|C12orf49|79794|chromosome 12 open reading frame 49##AK309652|C12orf49|79794|chromosome 12 open reading frame 49##BC019843|C12orf49|79794|chromosome 12 open reading frame 49##AK025068|C12orf49|79794|chromosome 12 open reading frame 49##NM_024738|C12orf49|79794|chromosome 12 open reading frame 49##NM_003806|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##U76376|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##BC037296|FBXW8|26259|F-box and WD repeat domain containing 8##NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8##NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8##AK289621|FBXW8|26259|F-box and WD repeat domain containing 8##AF176707|FBXW8|26259|F-box and WD repeat domain containing 8##DQ894644|TESC|54997|tescalcin##AF443207|TESC|54997|tescalcin##BC015221|TESC|54997|tescalcin##NM_001168325|TESC|54997|tescalcin##NM_017899|TESC|54997|tescalcin##AK000614|TESC|54997|tescalcin	0.869245	CTCF.p2:-20:0.869
chr13	77396972	77397068	reg1024197.p1	5.193	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-1062180	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-1186550	+	AF330045 NM_005358	-1202451	+	BC013764 TSC_hg19_v1_chr13_-_77460431	63380	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	63587	-	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	169149	+	NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5	0.531386	CTCF.p2:-15:0.531
chr14	106146793	106146973	reg1004345.p2	5.193	+	TSC_hg19_v1_chr14_-_106111114 AJ294731	-35767	-	BC040042 TSC_hg19_v1_chr14_-_106110945	-35960	-	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	-54547	-	TSC_hg19_v1_chr14_-_106174914 BC113815 AJ294729	28070	-	TSC_hg19_v1_chr14_-_106208542 AF487336	61666	-	AF150959 TSC_hg19_v1_chr14_-_106208714 S76144	61827	-	AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AJ294729|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.0	
chr14	95215266	95215365	reg1026862.p1	5.193	+	NM_001085 TSC_hg19_v1_chr14_+_95078727 AK123091 AK308565 BC070265 BC003559 AB209060 BC010530 BC034554 AY513275 AY513276	-136579	+	TSC_hg19_v1_chr14_+_95047798 AK293192 BC008915 AK096131	-167509	+	TSC_hg19_v1_chr14_+_95047766 AK298279	-167552	+	AB463695 BC063580 AY177407 NM_173849	21109	-	AB590557 HM595745 NM_001195573	384501	-	AB028449 NM_030621	392739	-	NM_001085|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AK123091|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC070265|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC003559|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AB209060|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC010530|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC034554|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AY513275|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AY513276|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AK293192|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##BC008915|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##AK096131|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##AK298279|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##BC063580|GSC|145258|goosecoid homeobox##AY177407|GSC|145258|goosecoid homeobox##NM_173849|GSC|145258|goosecoid homeobox##HM595745|DICER1|23405|dicer 1, ribonuclease type III##NM_001195573|DICER1|23405|dicer 1, ribonuclease type III##AB028449|DICER1|23405|dicer 1, ribonuclease type III##NM_030621|DICER1|23405|dicer 1, ribonuclease type III	0.723437	CTCF.p2:8:0.630
chr19	2749173	2749315	reg1000668.p1	5.193	+	TSC_hg19_v1_chr19_-_2740065 NM_144564 NM_213568	-9177	-	TSC_hg19_v1_chr19_-_2740016 AK302600 BC020571 AK002044	-9216	-	TSC_hg19_v1_chr19_-_2740007 BC005869	-9240	-	TSC_hg19_v1_chr19_-_2783272 AJ133129 BC005165 BC008885 BC000390 BC002989	34018	-	TSC_hg19_v1_chr19_-_2783313 AL050156	34070	-	AK293535 TSC_hg19_v1_chr19_-_2783326	34083	-	NM_144564|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##NM_213568|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##AK302600|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##BC020571|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##AK002044|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##BC005869|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##AJ133129|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##BC005165|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##BC008885|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##BC000390|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##BC002989|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##AL050156|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##AK293535|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	0.0	
chrX	109389130	109389298	reg1025697.p1	5.193	+	TSC_hg19_v1_chrX_+_109246360 BC085605	-142859	+	TSC_hg19_v1_chrX_+_109246341 NM_032227 AK026332	-142874	+	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	-143344	+	CU687440 TSC_hg19_v1_chrX_-_109561311 AK314596 BC060813	172091	-	TSC_hg19_v1_chrX_-_109561314 BX648797 NM_001025580 NM_015365	172132	-	TSC_hg19_v1_chrX_-_109561428 AJ007014	172232	-	BC085605|TMEM164|84187|transmembrane protein 164##NM_032227|TMEM164|84187|transmembrane protein 164##AK026332|TMEM164|84187|transmembrane protein 164##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164##AK314596|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC060813|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BX648797|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001025580|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_015365|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1	0.0	
chr1	117636712	117636839	reg1028172.p1	5.192	+	TSC_hg19_v1_chr1_+_117602948 AF073771 NM_003594 AF080255 BC015341 BC030058	-33821	+	AK291017 TSC_hg19_v1_chr1_+_117602939	-33851	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	-92370	+	AK023243 AK222901 BC034943 AY669488 NM_001145635 NM_025188	27604	-	AK303466 NM_001253849	109682	-	AY280972 DQ103757 AB590614 BC074729 AY346100 AY358352 AK026071 AK225413 AK310812 AY442303 BC065717 BX648021 DQ836392 NM_001253850 NM_024626	116753	-	AF073771|TTF2|8458|transcription termination factor, RNA polymerase II##NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II##AF080255|TTF2|8458|transcription termination factor, RNA polymerase II##BC015341|TTF2|8458|transcription termination factor, RNA polymerase II##BC030058|TTF2|8458|transcription termination factor, RNA polymerase II##AK291017|TTF2|8458|transcription termination factor, RNA polymerase II##AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule##AK023243|TRIM45|80263|tripartite motif containing 45##AK222901|TRIM45|80263|tripartite motif containing 45##BC034943|TRIM45|80263|tripartite motif containing 45##AY669488|TRIM45|80263|tripartite motif containing 45##NM_001145635|TRIM45|80263|tripartite motif containing 45##NM_025188|TRIM45|80263|tripartite motif containing 45##AK303466|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253849|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY280972|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ103757|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC074729|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY346100|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY358352|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK026071|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK225413|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK310812|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY442303|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC065717|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BX648021|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ836392|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253850|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_024626|VTCN1|79679|V-set domain containing T cell activation inhibitor 1	0.0	
chr20	36037742	36037882	reg1025336.p1	5.192	+	TSC_hg19_v1_chr20_+_36011960 BC011566	-25809	+	TSC_hg19_v1_chr20_+_35974513 NM_198291 Z18364	-63305	+	TSC_hg19_v1_chr20_+_35973086 AF272982 NM_005417	-64719	+	TSC_hg19_v1_chr20_-_36073959 D28405	36143	-	NM_005386 NM_181689 TSC_hg19_v1_chr20_+_36149651 AK312069 U25034 BC001768 U25033 AB002392 BT019426	111857	+	NM_001167823	115140	-	BC011566|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##AF272982|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005417|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005386|NNAT|4826|neuronatin##NM_181689|NNAT|4826|neuronatin##AK312069|NNAT|4826|neuronatin##U25034|NNAT|4826|neuronatin##BC001768|NNAT|4826|neuronatin##U25033|NNAT|4826|neuronatin##AB002392|NNAT|4826|neuronatin##BT019426|NNAT|4826|neuronatin##NM_001167823|BLCAP|10904|bladder cancer associated protein	0.02947	
chr22	18360193	18360319	reg1023813.p2	5.192	+	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-102922	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-103033	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	-103049	-	TSC_hg19_v1_chr22_-_18484268 AK127487	123972	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	147005	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	200432	+	BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26	0.0	
chr22	45631251	45631388	reg1026478.p1	5.192	+	AK315883 AK297058 TSC_hg19_v1_chr22_-_45609417	-21951	-	NM_015264 AK124648 TSC_hg19_v1_chr22_-_45608429	-22919	-	TSC_hg19_v1_chr22_-_45608255 AK309015 BC038414	-23067	-	CU012960 CU013248 CR456402 TSC_hg19_v1_chr22_-_45636622 NM_001009880	5297	-	TSC_hg19_v1_chr22_-_45636776 AK094937	5455	-	TSC_hg19_v1_chr22_+_45680833 AF085808 BC069544 NM_001167574 NM_006953 BC108900 CR456608 AB010637 AB528272 CU013204 CU013492	49541	+	AK315883|KIAA0930|23313|KIAA0930##AK297058|KIAA0930|23313|KIAA0930##NM_015264|KIAA0930|23313|KIAA0930##AK124648|KIAA0930|23313|KIAA0930##AK309015|KIAA0930|23313|KIAA0930##BC038414|KIAA0930|23313|KIAA0930##CU012960|KIAA0930|23313|KIAA0930##CU013248|KIAA0930|23313|KIAA0930##CR456402|KIAA0930|23313|KIAA0930##NM_001009880|KIAA0930|23313|KIAA0930##AK094937|KIAA0930|23313|KIAA0930##AF085808|UPK3A|7380|uroplakin 3A##BC069544|UPK3A|7380|uroplakin 3A##NM_001167574|UPK3A|7380|uroplakin 3A##NM_006953|UPK3A|7380|uroplakin 3A##BC108900|UPK3A|7380|uroplakin 3A##CR456608|UPK3A|7380|uroplakin 3A##AB010637|UPK3A|7380|uroplakin 3A##CU013204|UPK3A|7380|uroplakin 3A##CU013492|UPK3A|7380|uroplakin 3A	0.0	
chr10	9785558	9785659	reg1032274.p1	5.191	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-1688125	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-1688833	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-1688959	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	1261649	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	1261677	+	AK299548 TSC_hg19_v1_chr10_+_11047339	1261732	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.012288	
chr1	40648793	40648895	reg1024181.p1	5.191	+	TSC_hg19_v1_chr1_+_40627068 HQ258544	-21768	+	TSC_hg19_v1_chr1_+_40627058 AK307662 U22377 X58480	-21787	+	TSC_hg19_v1_chr1_+_40627044 BC113666 NM_012421	-21805	+	NM_001008740 BC108666	64761	+	BC012000 TSC_hg19_v1_chr1_-_40723621 AK054902	74771	-	TSC_hg19_v1_chr1_+_40723742 NM_005857 AB016068 BC037283	74932	+	HQ258544|RLF|6018|rearranged L-myc fusion##AK307662|RLF|6018|rearranged L-myc fusion##U22377|RLF|6018|rearranged L-myc fusion##BC113666|RLF|6018|rearranged L-myc fusion##NM_012421|RLF|6018|rearranged L-myc fusion##NM_001008740|TMCO2|127391|transmembrane and coiled-coil domains 2##BC108666|TMCO2|127391|transmembrane and coiled-coil domains 2##NM_005857|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##AB016068|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##BC037283|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)	0.987579	CTCF.p2:11:0.988
chr3	139925645	139925730	reg1023743.p1	5.191	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-271435	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-271669	+	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	-528859	-	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	471272	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	735080	+	TSC_hg19_v1_chr3_+_140770412 BC051354	844791	+	AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.0	
chr5	159887782	159887878	reg1024638.p1	5.191	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-38927	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-38976	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-41725	-	AK025130 TSC_hg19_v1_chr5_-_160112393	224509	-	AB018258 AK295081 AK090832 AX746642 NM_025153	391301	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	1087296	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.0	
chr7	151048275	151048360	reg1007100.p3	5.191	+	TSC_hg19_v1_chr7_+_151038909 AF459743 AY129295 AK293159 AF155099	-9403	+	TSC_hg19_v1_chr7_+_151038874 NM_001243351 NM_016118 AF300717	-9475	+	BX648385 TSC_hg19_v1_chr7_-_150974229 NM_003078 U66619	-74088	-	AK056624 TSC_hg19_v1_chr7_-_151071775	23419	-	TSC_hg19_v1_chr7_-_151107122 NM_198285	58804	-	BC100878 BC100879 BC100880 BC100881 AF445455 NM_144727	88778	-	AF459743|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AY129295|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AK293159|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF155099|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_001243351|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_016118|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF300717|NUB1|51667|negative regulator of ubiquitin-like proteins 1##BX648385|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_003078|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##U66619|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_198285|WDR86|349136|WD repeat domain 86##BC100878|CRYGN|155051|crystallin, gamma N##BC100879|CRYGN|155051|crystallin, gamma N##BC100880|CRYGN|155051|crystallin, gamma N##BC100881|CRYGN|155051|crystallin, gamma N##AF445455|CRYGN|155051|crystallin, gamma N##NM_144727|CRYGN|155051|crystallin, gamma N	0.989243	CTCF.p2:1:0.989
chr9	138396643	138396771	reg1028061.p2	5.191	+	TSC_hg19_v1_chr9_+_138392535 NM_016034 BC008017 BC013108 AB055388 AF151849	-4194	+	AY927868 DQ892784 DQ896031 NM_001048265 NM_144654	-4979	-	TSC_hg19_v1_chr9_+_138371663 AB014549 NM_014811	-25057	+	M90424 NM_001252617 NM_001252618 NM_001252619 NM_002297 BC065721 X67647 BC074925 BC074926 X62418	16599	+	AJ251021 AJ251022 AJ251023 AJ251024 NM_014582 BC143803 BC069563 AM087898	41319	+	AK311730 AK304657 AK309965 AK309983 AK311007 AK311731 AK311813 J04129 NM_001018049 NM_002571 M61886 AL050169 BC069451 BC069562 AB528962 HQ258098 CU686906 BC112304 BC113728 DQ884407	56916	+	NM_016034|MRPS2|51116|mitochondrial ribosomal protein S2##BC008017|MRPS2|51116|mitochondrial ribosomal protein S2##BC013108|MRPS2|51116|mitochondrial ribosomal protein S2##AB055388|MRPS2|51116|mitochondrial ribosomal protein S2##AF151849|MRPS2|51116|mitochondrial ribosomal protein S2##AY927868|C9orf116|138162|chromosome 9 open reading frame 116##DQ892784|C9orf116|138162|chromosome 9 open reading frame 116##DQ896031|C9orf116|138162|chromosome 9 open reading frame 116##NM_001048265|C9orf116|138162|chromosome 9 open reading frame 116##NM_144654|C9orf116|138162|chromosome 9 open reading frame 116##AB014549|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##NM_014811|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##M90424|LCN1|3933|lipocalin 1##NM_001252617|LCN1|3933|lipocalin 1##NM_001252618|LCN1|3933|lipocalin 1##NM_001252619|LCN1|3933|lipocalin 1##NM_002297|LCN1|3933|lipocalin 1##BC065721|LCN1|3933|lipocalin 1##X67647|LCN1|3933|lipocalin 1##BC074925|LCN1|3933|lipocalin 1##BC074926|LCN1|3933|lipocalin 1##X62418|LCN1|3933|lipocalin 1##AJ251021|OBP2A|29991|odorant binding protein 2A##AJ251022|OBP2A|29991|odorant binding protein 2A##AJ251023|OBP2A|29991|odorant binding protein 2A##AJ251024|OBP2A|29991|odorant binding protein 2A##NM_014582|OBP2A|29991|odorant binding protein 2A##BC069563|OBP2A|29991|odorant binding protein 2A##AM087898|OBP2A|29991|odorant binding protein 2A##AK311730|PAEP|5047|progestagen-associated endometrial protein##AK304657|PAEP|5047|progestagen-associated endometrial protein##AK309983|PAEP|5047|progestagen-associated endometrial protein##AK311007|PAEP|5047|progestagen-associated endometrial protein##AK311813|PAEP|5047|progestagen-associated endometrial protein##J04129|PAEP|5047|progestagen-associated endometrial protein##NM_001018049|PAEP|5047|progestagen-associated endometrial protein##NM_002571|PAEP|5047|progestagen-associated endometrial protein##M61886|PAEP|5047|progestagen-associated endometrial protein##BC069451|PAEP|5047|progestagen-associated endometrial protein##BC069562|PAEP|5047|progestagen-associated endometrial protein##HQ258098|PAEP|5047|progestagen-associated endometrial protein##BC112304|PAEP|5047|progestagen-associated endometrial protein##BC113728|PAEP|5047|progestagen-associated endometrial protein##DQ884407|PAEP|5047|progestagen-associated endometrial protein	0.999651	CTCF.p2:-30:1.000
chr19	12606201	12606337	reg1026503.p1	5.190	+	TSC_hg19_v1_chr19_-_12595631 NM_152601	-10641	-	BC136746 BC136751 AK290911 TSC_hg19_v1_chr19_-_12595603 BC036481	-10693	-	AK023025 BC032753 TSC_hg19_v1_chr19_-_12551836 AB011414 NM_005815	-54403	-	BC136728 BC136729 TSC_hg19_v1_chr19_-_12662297 BC065023 AK095600 BC028367 AK092760 AX747711 BX647959 NM_144976	56004	-	AB385437 CU691590 EU446833 BC038586 AB033024 NM_020714 TSC_hg19_v1_chr19_-_12721628	115292	-	AK307775 NM_153358 AK298597 TSC_hg19_v1_chr19_+_12721749 AX721060 AK074877 AK297715 BC106937 BC106938	115495	+	NM_152601|ZNF709|163051|zinc finger protein 709##BC136746|ZNF709|163051|zinc finger protein 709##BC136751|ZNF709|163051|zinc finger protein 709##AK290911|ZNF709|163051|zinc finger protein 709##BC036481|ZNF709|163051|zinc finger protein 709##AK023025|ZNF443|10224|zinc finger protein 443##BC032753|ZNF443|10224|zinc finger protein 443##AB011414|ZNF443|10224|zinc finger protein 443##NM_005815|ZNF443|10224|zinc finger protein 443##BC136728|ZNF564|163050|zinc finger protein 564##BC136729|ZNF564|163050|zinc finger protein 564##BC065023|ZNF564|163050|zinc finger protein 564##BC028367|ZNF564|163050|zinc finger protein 564##AK092760|ZNF564|163050|zinc finger protein 564##BX647959|ZNF564|163050|zinc finger protein 564##NM_144976|ZNF564|163050|zinc finger protein 564##EU446833|ZNF490|57474|zinc finger protein 490##BC038586|ZNF490|57474|zinc finger protein 490##AB033024|ZNF490|57474|zinc finger protein 490##NM_020714|ZNF490|57474|zinc finger protein 490##AK307775|ZNF791|163049|zinc finger protein 791##NM_153358|ZNF791|163049|zinc finger protein 791##AK298597|ZNF791|163049|zinc finger protein 791##AK074877|ZNF791|163049|zinc finger protein 791##AK297715|ZNF791|163049|zinc finger protein 791##BC106937|ZNF791|163049|zinc finger protein 791##BC106938|ZNF791|163049|zinc finger protein 791	0.020985	
chr1	15480657	15480774	reg1022786.p1	5.189	+	TSC_hg19_v1_chr1_+_15480249 AK001061 NM_001136218 NM_018022 BC000593 BC005177 AK098467	-467	+	AK129922 TSC_hg19_v1_chr1_+_15479310	-1411	+	AK292184 NM_001136216 NM_001136217 TSC_hg19_v1_chr1_+_15479047	-1684	+	AK057963 NM_052929	93052	+	TSC_hg19_v1_chr1_+_15736390 NM_024329	255685	+	BC068473 TSC_hg19_v1_chr1_+_15736425 BC007233 BC014923 BC023611	255720	+	AK001061|TMEM51|55092|transmembrane protein 51##NM_001136218|TMEM51|55092|transmembrane protein 51##NM_018022|TMEM51|55092|transmembrane protein 51##BC000593|TMEM51|55092|transmembrane protein 51##BC005177|TMEM51|55092|transmembrane protein 51##AK098467|TMEM51|55092|transmembrane protein 51##AK129922|TMEM51|55092|transmembrane protein 51##AK292184|TMEM51|55092|transmembrane protein 51##NM_001136216|TMEM51|55092|transmembrane protein 51##NM_001136217|TMEM51|55092|transmembrane protein 51##AK057963|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##NM_052929|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##NM_024329|EFHD2|79180|EF-hand domain family, member D2##BC068473|EFHD2|79180|EF-hand domain family, member D2##BC007233|EFHD2|79180|EF-hand domain family, member D2##BC014923|EFHD2|79180|EF-hand domain family, member D2##BC023611|EFHD2|79180|EF-hand domain family, member D2	0.156614	
chr20	36525735	36525828	reg1027333.p1	5.189	+	TSC_hg19_v1_chr20_+_36322503 AF370431 AK293420	-203298	+	AK074663 AK130301 TSC_hg19_v1_chr20_+_36322443	-203337	+	TSC_hg19_v1_chr20_+_36322440 NM_030877 BC121005 BC121006 AF239607	-203351	+	NM_080607 AK056177 TSC_hg19_v1_chr20_+_36531528 AL834410	5735	+	TSC_hg19_v1_chr20_+_36531556 BC033818	5776	+	BC013755 TSC_hg19_v1_chr20_-_36661845 BC013121 NM_014657 AK308164 BC107778	136062	-	AF370431|CTNNBL1|56259|catenin, beta like 1##AK293420|CTNNBL1|56259|catenin, beta like 1##AK074663|CTNNBL1|56259|catenin, beta like 1##AK130301|CTNNBL1|56259|catenin, beta like 1##NM_030877|CTNNBL1|56259|catenin, beta like 1##BC121005|CTNNBL1|56259|catenin, beta like 1##BC121006|CTNNBL1|56259|catenin, beta like 1##AF239607|CTNNBL1|56259|catenin, beta like 1##NM_080607|VSTM2L|128434|V-set and transmembrane domain containing 2 like##AK056177|VSTM2L|128434|V-set and transmembrane domain containing 2 like##AL834410|VSTM2L|128434|V-set and transmembrane domain containing 2 like##BC033818|VSTM2L|128434|V-set and transmembrane domain containing 2 like##BC013755|TTI1|9675|TELO2 interacting protein 1##BC013121|TTI1|9675|TELO2 interacting protein 1##NM_014657|TTI1|9675|TELO2 interacting protein 1##AK308164|TTI1|9675|TELO2 interacting protein 1##BC107778|TTI1|9675|TELO2 interacting protein 1	0.636306	CTCF.p2:0:0.636
chr7	149194828	149194931	reg1027490.p1	5.189	+	TSC_hg19_v1_chr7_-_149194830 AK291814	-39	-	TSC_hg19_v1_chr7_-_149194795 BC068505 BC035586	-94	-	TSC_hg19_v1_chr7_-_149157908 AB033111 NM_015694	-36920	-	TSC_hg19_v1_chr7_-_149194899 NM_001163474 NM_152557 AK128244	19	-	AB590454 AK295771 TSC_hg19_v1_chr7_-_149321793 AK022762	126863	-	TSC_hg19_v1_chr7_-_149321856 BC047675	126975	-	AK291814|ZNF746|155061|zinc finger protein 746##BC068505|ZNF746|155061|zinc finger protein 746##BC035586|ZNF746|155061|zinc finger protein 746##AB033111|ZNF777|27153|zinc finger protein 777##NM_015694|ZNF777|27153|zinc finger protein 777##NM_001163474|ZNF746|155061|zinc finger protein 746##NM_152557|ZNF746|155061|zinc finger protein 746##AK128244|ZNF746|155061|zinc finger protein 746##AK295771|ZNF767|79970|zinc finger family member 767##AK022762|ZNF767|79970|zinc finger family member 767##BC047675|ZNF767|79970|zinc finger family member 767	0.0	
chr8	22832196	22832319	reg1024029.p2	5.189	+	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	-46933	-	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-281473	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-281752	-	AK092617 BC034917 NM_001160036	12666	+	NM_001160037	21103	+	TSC_hg19_v1_chr8_+_22857067 AB018260 NM_015178	24820	+	AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2##AB018260|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_015178|RHOBTB2|23221|Rho-related BTB domain containing 2	0.933531	CTCF.p2:6:0.934
chrX	103913378	103913501	reg1027959.p1	5.189	+	TSC_hg19_v1_chrX_+_103810991 AJ272208 NM_017416	-102447	+	AK290196 TSC_hg19_v1_chrX_+_103810879	-102560	+	BC042633 AY114148 BC053599 NM_153448 AK097704	-413853	-	BC108734 AF285597 BC042547 NM_031274	551914	-	TSC_hg19_v1_chrX_+_105066535 BX538345 NM_198465 BC108702	1153099	+	TSC_hg19_v1_chrX_+_105066559 AK131549	1153127	+	AJ272208|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##NM_017416|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##AK290196|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##BC042633|ESX1|80712|ESX homeobox 1##AY114148|ESX1|80712|ESX homeobox 1##BC053599|ESX1|80712|ESX homeobox 1##NM_153448|ESX1|80712|ESX homeobox 1##AK097704|ESX1|80712|ESX homeobox 1##BC108734|TEX13A|56157|testis expressed 13A##AF285597|TEX13A|56157|testis expressed 13A##BC042547|TEX13A|56157|testis expressed 13A##NM_031274|TEX13A|56157|testis expressed 13A##BX538345|NRK|203447|Nik related kinase##NM_198465|NRK|203447|Nik related kinase##BC108702|NRK|203447|Nik related kinase##AK131549|NRK|203447|Nik related kinase	0.985397	CTCF.p2:-22:0.985
chr4	96756994	96757090	reg1022835.p1	5.188	+	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	-286666	-	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	-286863	-	TSC_hg19_v1_chr4_+_95679109 NM_001203 U89326	-1077936	+	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	4216	+	CU691442 BC036870 NM_174952	2307303	-	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	2425552	+	BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB##U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB##NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1	0.207187	CTCF.p2:-22:0.207
chr6	137493643	137493818	reg1026530.p2	5.188	+	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	-127485	-	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	-127892	-	AK316095 BC087842 NM_001008783 AK295424	-250277	+	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	1021	-	TSC_hg19_v1_chr6_-_137540496 BT006814 AB527981 CU675119 AF056979 AK294252	46738	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	46782	-	AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2##BT006814|IFNGR1|3459|interferon gamma receptor 1##AF056979|IFNGR1|3459|interferon gamma receptor 1##AK294252|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1	0.0	
chr7	130756734	130756847	reg1012560.p2	5.188	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-337863	-	AF294347 AF431815 BC038415 NM_052933	-385435	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-403195	-	TSC_hg19_v1_chr7_-_130792857 BC047367	36069	-	AK294384 NM_001145354	38064	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	255816	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.0	
chr7	26318547	26318682	reg1023847.p1	5.188	+	TSC_hg19_v1_chr7_+_26242052 AF086270	-76557	+	TSC_hg19_v1_chr7_+_26241400 BX647444 AF136630	-77224	+	TSC_hg19_v1_chr7_+_26241368 BX648807	-77265	+	TSC_hg19_v1_chr7_+_26331538 NM_001199835 NM_013322 AK316088 BC034992	12907	+	TSC_hg19_v1_chr7_+_26331633 BC031050 AK312850 AK296142	13033	+	NM_001199837 AK307905	81914	+	BX647444|CBX3|11335|chromobox homolog 3##AF136630|CBX3|11335|chromobox homolog 3##BX648807|CBX3|11335|chromobox homolog 3##NM_001199835|SNX10|29887|sorting nexin 10##NM_013322|SNX10|29887|sorting nexin 10##AK316088|SNX10|29887|sorting nexin 10##BC034992|SNX10|29887|sorting nexin 10##BC031050|SNX10|29887|sorting nexin 10##AK312850|SNX10|29887|sorting nexin 10##AK296142|SNX10|29887|sorting nexin 10##NM_001199837|SNX10|29887|sorting nexin 10##AK307905|SNX10|29887|sorting nexin 10	0.999698	CTCF.p2:19:1.000
chr1	197490428	197490546	reg1024540.p1	5.187	+	NM_001193640 NM_201253 AK299368 AK289733 AK307844 AB208923 AF154671 AY043324 AY043325 BC136271 BC143726 AJ748821	-253050	+	BC132818 BC136600 AK128549 AY163816 NM_194314	-320834	-	AF509326 AY099892 AY367065 AY971955 AY971956 AY971957 BC015396 TSC_hg19_v1_chr1_-_197115800 AK226178 AK125107 NM_001206846 NM_018136	-374793	-	AK000061 TSC_hg19_v1_chr1_-_197552357	61845	-	TSC_hg19_v1_chr1_-_197744376 BC022561	253847	-	TSC_hg19_v1_chr1_-_197744396 BC063456	253909	-	NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)##NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)##AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)##AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)##AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)##AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)##AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)##BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)##BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)##AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)##BC132818|ZBTB41|360023|zinc finger and BTB domain containing 41##BC136600|ZBTB41|360023|zinc finger and BTB domain containing 41##AK128549|ZBTB41|360023|zinc finger and BTB domain containing 41##AY163816|ZBTB41|360023|zinc finger and BTB domain containing 41##NM_194314|ZBTB41|360023|zinc finger and BTB domain containing 41##AF509326|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY099892|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY367065|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971955|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971956|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971957|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##BC015396|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK226178|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK125107|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_001206846|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_018136|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK000061|DENND1B|163486|DENN/MADD domain containing 1B##BC022561|DENND1B|163486|DENN/MADD domain containing 1B##BC063456|DENND1B|163486|DENN/MADD domain containing 1B	0.985691	CTCF.p2:-19:0.986
chr17	32291495	32291610	reg1028532.p1	5.187	+	AL834182 NM_183377	-671547	-	AF216311 NM_173847 BC100886 BC100887	-972650	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-1036349	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	192135	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	290779	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	305721	+	AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7	0.255653	CTCF.p2:-10:0.256
chr5	156091977	156092065	reg1024994.p1	5.187	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	-337848	+	BX537948 NM_000337 NM_001128209 NM_172244	-338261	+	NM_001099293 AK302388	-1698735	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	298214	-	BC013325 TSC_hg19_v1_chr5_-_156485247	393162	-	TSC_hg19_v1_chr5_-_156485459 NM_001099414 NM_012206	393444	-	BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC013325|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_001099414|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_012206|HAVCR1|26762|hepatitis A virus cellular receptor 1	0.498492	CTCF.p2:-4:0.328
chr6	137415858	137416039	reg1003970.p2	5.187	+	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	-49703	-	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	-50110	-	AK316095 BC087842 NM_001008783 AK295424	-172495	+	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	78803	-	TSC_hg19_v1_chr6_-_137540496 BT006814 AB527981 CU675119 AF056979 AK294252	124520	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	124564	-	AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2##BT006814|IFNGR1|3459|interferon gamma receptor 1##AF056979|IFNGR1|3459|interferon gamma receptor 1##AK294252|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1	0.0	
chr9	126164336	126164467	reg1027664.p2	5.187	+	NM_173689 AK123000 DQ426866 AY720432	-45908	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-133513	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	-133581	-	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	527910	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	609482	+	TSC_hg19_v1_chr9_+_126774046 BC034458	609670	+	NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC034458|LHX2|9355|LIM homeobox 2	0.198171	
chr11	56392169	56392287	reg1024550.p1	5.186	+	NM_001004740	-11251	-	NM_001004741 BC140733	-46999	-	NM_001005245 BC136951 BC136953	-81484	-	NM_001002925 BC136989 BC136990	17702	-	BC140745 NM_001004730	38921	+	AB463984 NM_001005213 NM_001013358	75633	+	NM_001004740|OR5M1|390168|olfactory receptor, family 5, subfamily M, member 1##NM_001004741|OR5M10|390167|olfactory receptor, family 5, subfamily M, member 10##BC140733|OR5M10|390167|olfactory receptor, family 5, subfamily M, member 10##NM_001005245|OR5M11|219487|olfactory receptor, family 5, subfamily M, member 11##BC136951|OR5M11|219487|olfactory receptor, family 5, subfamily M, member 11##BC136953|OR5M11|219487|olfactory receptor, family 5, subfamily M, member 11##NM_001002925|OR5AP2|338675|olfactory receptor, family 5, subfamily AP, member 2##BC136989|OR5AP2|338675|olfactory receptor, family 5, subfamily AP, member 2##BC136990|OR5AP2|338675|olfactory receptor, family 5, subfamily AP, member 2##BC140745|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1##NM_001004730|OR5AR1|219493|olfactory receptor, family 5, subfamily AR, member 1##NM_001005213|OR9G1|390174|olfactory receptor, family 9, subfamily G, member 1##NM_001013358|OR9G9|504191|olfactory receptor, family 9, subfamily G, member 9	0.817928	CTCF.p2:-9:0.818
chr14	91452301	91452443	reg1028533.p1	5.186	+	NM_001010854 TSC_hg19_v1_chr14_-_91282765	-169607	-	AB527232 TSC_hg19_v1_chr14_-_91282750	-169674	-	TSC_hg19_v1_chr14_+_90863372 BC011834 BC047523 U16851 BC000454 BC008597 AK289937 M27319	-588945	+	TSC_hg19_v1_chr14_-_91526731 CU677851	74382	-	TSC_hg19_v1_chr14_-_91526968 AF090421 AF074393 AF080000 BC017187 AK309925 NM_004755 NM_182398	74598	-	NM_001102366 NM_001102368 NM_001102369 NM_024952 TSC_hg19_v1_chr14_+_91580416 AK097294 AK098752 BX537970 BX161393 BX247989 BC009182 AK308857 AB210031	128033	+	NM_001010854|TTC7B|145567|tetratricopeptide repeat domain 7B##BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AF090421|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##AF074393|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##AF080000|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##BC017187|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##AK309925|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##NM_004755|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##NM_182398|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159##NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159##NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159##NM_024952|C14orf159|80017|chromosome 14 open reading frame 159##AK097294|C14orf159|80017|chromosome 14 open reading frame 159##AK098752|C14orf159|80017|chromosome 14 open reading frame 159##BX537970|C14orf159|80017|chromosome 14 open reading frame 159##BX161393|C14orf159|80017|chromosome 14 open reading frame 159##BX247989|C14orf159|80017|chromosome 14 open reading frame 159##BC009182|C14orf159|80017|chromosome 14 open reading frame 159##AK308857|C14orf159|80017|chromosome 14 open reading frame 159##AB210031|C14orf159|80017|chromosome 14 open reading frame 159	0.0	
chr15	70307493	70307639	reg1022726.p2	5.186	+	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-562345	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-600204	-	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	-600820	+	BC015421 TSC_hg19_v1_chr15_-_70341948	34343	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	82661	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	82677	-	NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.0	
chr20	15883286	15883405	reg1025117.p2	5.186	+	BC018687 NM_001033087	-705842	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-1565089	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-1907009	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	670668	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	827318	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	845676	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	0.659699	CTCF.p2:16:0.660
chr4	39412222	39412364	reg1027680.p1	5.186	+	TSC_hg19_v1_chr4_+_39408557 BC104871 BC113653 BC143575	-3744	+	AB079373 NM_175737 TSC_hg19_v1_chr4_+_39408496	-3809	+	AF040250 BC035297 TSC_hg19_v1_chr4_-_39367983 BC051751 AK291612 BC010387 AJ564999 NM_001204747 NM_002913	-44341	-	AB529031 DQ892727 DQ892959 DQ895974 AB062431 BC004156 BC004206 BC031906 D14531 U21138 NM_001024921 BC100285 AY376242	47853	-	TSC_hg19_v1_chr4_-_39460503 BC000483	48219	-	AK130966 AK303908 AY320412 TSC_hg19_v1_chr4_-_39460532 AL832047 AY597415 AK312241 BC066318 U09953 AK297178 NM_000661	48255	-	BC104871|KLB|152831|klotho beta##BC113653|KLB|152831|klotho beta##BC143575|KLB|152831|klotho beta##AB079373|KLB|152831|klotho beta##NM_175737|KLB|152831|klotho beta##AF040250|RFC1|5981|replication factor C (activator 1) 1, 145kDa##BC035297|RFC1|5981|replication factor C (activator 1) 1, 145kDa##BC051751|RFC1|5981|replication factor C (activator 1) 1, 145kDa##AK291612|RFC1|5981|replication factor C (activator 1) 1, 145kDa##BC010387|RFC1|5981|replication factor C (activator 1) 1, 145kDa##AJ564999|RFC1|5981|replication factor C (activator 1) 1, 145kDa##NM_001204747|RFC1|5981|replication factor C (activator 1) 1, 145kDa##NM_002913|RFC1|5981|replication factor C (activator 1) 1, 145kDa##DQ892727|RPL9|6133|ribosomal protein L9##DQ892959|RPL9|6133|ribosomal protein L9##DQ895974|RPL9|6133|ribosomal protein L9##AB062431|RPL9|6133|ribosomal protein L9##BC004156|RPL9|6133|ribosomal protein L9##BC004206|RPL9|6133|ribosomal protein L9##BC031906|RPL9|6133|ribosomal protein L9##D14531|RPL9|6133|ribosomal protein L9##U21138|RPL9|6133|ribosomal protein L9##NM_001024921|RPL9|6133|ribosomal protein L9##BC100285|RPL9|6133|ribosomal protein L9##AY376242|RPL9|6133|ribosomal protein L9##BC000483|RPL9|6133|ribosomal protein L9##AK130966|RPL9|6133|ribosomal protein L9##AK303908|RPL9|6133|ribosomal protein L9##AY320412|RPL9|6133|ribosomal protein L9##AL832047|RPL9|6133|ribosomal protein L9##AY597415|RPL9|6133|ribosomal protein L9##AK312241|RPL9|6133|ribosomal protein L9##BC066318|RPL9|6133|ribosomal protein L9##U09953|RPL9|6133|ribosomal protein L9##AK297178|RPL9|6133|ribosomal protein L9##NM_000661|RPL9|6133|ribosomal protein L9	0.909324	CTCF.p2:4:0.909
chr5	36242142	36242279	reg1028391.p2	5.186	+	NM_001085411 TSC_hg19_v1_chr5_-_36241996	-222	-	TSC_hg19_v1_chr5_-_36241813 BC045565	-435	-	BC007441 TSC_hg19_v1_chr5_+_36152241 BC001441 AK296223 AY029177	-89943	+	BC062567 NM_153013 AK304009	101	-	BC017951 AK058151 AK302947 TSC_hg19_v1_chr5_-_36302002 BC047660 NM_001161429 NM_145000	59794	-	NM_001166696 NM_004172	364246	+	NM_001085411|NADKD1|133686|NAD kinase domain containing 1##BC045565|NADKD1|133686|NAD kinase domain containing 1##BC007441|SKP2|6502|S-phase kinase-associated protein 2 (p45)##BC001441|SKP2|6502|S-phase kinase-associated protein 2 (p45)##AK296223|SKP2|6502|S-phase kinase-associated protein 2 (p45)##AY029177|SKP2|6502|S-phase kinase-associated protein 2 (p45)##BC062567|NADKD1|133686|NAD kinase domain containing 1##NM_153013|NADKD1|133686|NAD kinase domain containing 1##AK304009|NADKD1|133686|NAD kinase domain containing 1##BC017951|RANBP3L|202151|RAN binding protein 3-like##AK058151|RANBP3L|202151|RAN binding protein 3-like##AK302947|RANBP3L|202151|RAN binding protein 3-like##BC047660|RANBP3L|202151|RAN binding protein 3-like##NM_001161429|RANBP3L|202151|RAN binding protein 3-like##NM_145000|RANBP3L|202151|RAN binding protein 3-like##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	0.06005	
chr10	35887427	35887519	reg1026084.p1	5.185	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	-261679	+	TSC_hg19_v1_chr10_+_35625400 AK314666	-262017	+	AF429969 AK057280 NM_181698	-351521	+	AK074504 NM_153368	6864	+	AB587328 AB043703 NM_031866	42886	-	AF269087 NM_052997	1527311	+	AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AK314666|CCNY|219771|cyclin Y##AF429969|CCNY|219771|cyclin Y##AK057280|CCNY|219771|cyclin Y##NM_181698|CCNY|219771|cyclin Y##AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa##AB043703|FZD8|8325|frizzled family receptor 8##NM_031866|FZD8|8325|frizzled family receptor 8##AF269087|ANKRD30A|91074|ankyrin repeat domain 30A##NM_052997|ANKRD30A|91074|ankyrin repeat domain 30A	0.561285	CTCF.p2:24:0.561
chr12	57569768	57569911	reg1033502.p1	5.185	+	TSC_hg19_v1_chr12_+_57522452 BC045107	-47376	+	TSC_hg19_v1_chr12_+_57522265 BC052593 BC072015 NM_002332 X13916	-47557	+	TSC_hg19_v1_chr12_-_57505177 NM_001178078 NM_001178080 NM_001178081 NM_003153	-64642	-	AY358614 NM_007224 TSC_hg19_v1_chr12_+_57610601 BC036679 AK094231 AK290949 BC053581 CU690992	40825	+	NM_001166356 NM_005412 TSC_hg19_v1_chr12_+_57623504 AK055053 AK223555 AK298231 AK301339 AK303827 BC032584 BC044211 AK295941 BC008066 BC012833 BC011911 BC091501 CU680112 CU689432 AB527799 BT006866 DQ891309 DQ894430	53619	+	NM_001166358 BX647711 AK301443 TSC_hg19_v1_chr12_+_57623972 BX648847 NM_001166359 NM_001166357 BC004189 BC004215 BC008711 AK296183 AK297173 AK315916	54149	+	BC045107|LRP1|4035|low density lipoprotein receptor-related protein 1##BC052593|LRP1|4035|low density lipoprotein receptor-related protein 1##BC072015|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_002332|LRP1|4035|low density lipoprotein receptor-related protein 1##X13916|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_001178078|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178080|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178081|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_003153|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AY358614|NXPH4|11247|neurexophilin 4##NM_007224|NXPH4|11247|neurexophilin 4##BC036679|NXPH4|11247|neurexophilin 4##AK094231|NXPH4|11247|neurexophilin 4##AK290949|NXPH4|11247|neurexophilin 4##BC053581|NXPH4|11247|neurexophilin 4##NM_001166356|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_005412|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK055053|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK223555|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK298231|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301339|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK303827|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC032584|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC044211|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK295941|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008066|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC011911|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC091501|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BT006866|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ891309|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ894430|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166358|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX647711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301443|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX648847|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166359|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166357|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK296183|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK297173|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK315916|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)	0.994494	CTCF.p2:-7:0.994
chr13	20558983	20559095	reg1024878.p1	5.185	+	TSC_hg19_v1_chr13_+_20532911 AJ224901 BX647944 NM_001190965	-26074	+	TSC_hg19_v1_chr13_+_20532881 AK226118 AK289741	-26155	+	TSC_hg19_v1_chr13_+_20532834 BC036372 NM_003453 NM_197968 AL136621 NM_001190964 Y13472	-26222	+	NM_021954	176143	-	BC017048 BC071703 TSC_hg19_v1_chr13_-_20767078 AK225966	208019	-	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	208072	-	AJ224901|ZMYM2|7750|zinc finger, MYM-type 2##BX647944|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190965|ZMYM2|7750|zinc finger, MYM-type 2##AK226118|ZMYM2|7750|zinc finger, MYM-type 2##AK289741|ZMYM2|7750|zinc finger, MYM-type 2##BC036372|ZMYM2|7750|zinc finger, MYM-type 2##NM_003453|ZMYM2|7750|zinc finger, MYM-type 2##NM_197968|ZMYM2|7750|zinc finger, MYM-type 2##AL136621|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190964|ZMYM2|7750|zinc finger, MYM-type 2##Y13472|ZMYM2|7750|zinc finger, MYM-type 2##NM_021954|GJA3|2700|gap junction protein, alpha 3, 46kDa##BC017048|GJB2|2706|gap junction protein, beta 2, 26kDa##BC071703|GJB2|2706|gap junction protein, beta 2, 26kDa##AK225966|GJB2|2706|gap junction protein, beta 2, 26kDa##AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa	0.996111	CTCF.p2:-2:0.996
chr14	64099795	64099900	reg1027924.p1	5.185	+	TSC_hg19_v1_chr14_-_64010089 BC056156 BC034994	-89758	-	TSC_hg19_v1_chr14_-_64010080 AK313500 BC013154 NM_006246	-89773	-	TSC_hg19_v1_chr14_-_64010017 Z69029 AK299520 BC073873 AB209811 BC092477 L76703 BC064358	-89831	-	BX248008 NM_001008726	8277	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	8715	-	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	94902	-	BC056156|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC034994|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AK313500|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC013154|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##NM_006246|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##Z69029|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AK299520|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC073873|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AB209811|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC092477|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##L76703|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC064358|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BX248008|WDR89|112840|WD repeat domain 89##NM_001008726|WDR89|112840|WD repeat domain 89##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1	0.836318	CTCF.p2:-4:0.836
chr21	44847285	44847441	reg1027569.p1	5.185	+	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	-368	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	-1374	-	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-258189	+	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	231999	-	TSC_hg19_v1_chr21_+_45079444 BC028386 NM_015056 BC014005 AK056263 D80001 AB385292	232095	+	TSC_hg19_v1_chr21_+_45138985 BC005825 NM_003681	291616	+	AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein##BC028386|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##NM_015056|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##BC014005|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##AK056263|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##D80001|RRP1B|23076|ribosomal RNA processing 1 homolog B (S. cerevisiae)##BC005825|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase##NM_003681|PDXK|8566|pyridoxal (pyridoxine, vitamin B6) kinase	0.656833	CTCF.p2:-34:0.657
chr14	59889321	59889441	reg1025825.p1	5.184	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	-233977	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-784635	+	AK302579 NM_001244193 AK310356 AK302718	-982955	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	42541	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	42675	-	TSC_hg19_v1_chr14_-_59951106 AK058165 NM_144581 BC012131	61699	-	BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135##AK058165|C14orf149|112849|chromosome 14 open reading frame 149##NM_144581|C14orf149|112849|chromosome 14 open reading frame 149##BC012131|C14orf149|112849|chromosome 14 open reading frame 149	0.985584	CTCF.p2:34:0.986
chr18	56282844	56283024	reg1019334.p1	5.184	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-394084	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-394131	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-394172	+	BX647796 NM_052947	13254	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	55707	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	55794	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.0	
chr19	49535075	49535239	reg1029230.p2	5.184	+	K03181 BC022796 BC106059 AK291552 NM_000737	-7632	-	NM_000894	-14811	-	TSC_hg19_v1_chr19_+_49497154 AK301344 AK027762 AK074542 AB024301 BC004531 BC008355 NM_006666 AF124607 AF151804 AF155138 AM393635 BC000428 Y18417 AK057498 AL136743 AB464184 CU678752 CU678925 DQ891392 DQ894568	-38013	+	NM_033378 BC107143 BC069367	24	+	BC126460 BC069367 BC107144 NM_033377	4974	-	NM_033043 TSC_hg19_v1_chr19_+_49547104 BC106059 BC022796 BC006290 BC051378	11963	+	K03181|CGB|1082|chorionic gonadotropin, beta polypeptide##BC022796|CGB|1082|chorionic gonadotropin, beta polypeptide##BC106059|CGB|1082|chorionic gonadotropin, beta polypeptide##AK291552|CGB|1082|chorionic gonadotropin, beta polypeptide##NM_000737|CGB|1082|chorionic gonadotropin, beta polypeptide##NM_000894|LHB|3972|luteinizing hormone beta polypeptide##AK301344|RUVBL2|10856|RuvB-like 2 (E. coli)##AK027762|RUVBL2|10856|RuvB-like 2 (E. coli)##AK074542|RUVBL2|10856|RuvB-like 2 (E. coli)##AB024301|RUVBL2|10856|RuvB-like 2 (E. coli)##BC004531|RUVBL2|10856|RuvB-like 2 (E. coli)##BC008355|RUVBL2|10856|RuvB-like 2 (E. coli)##NM_006666|RUVBL2|10856|RuvB-like 2 (E. coli)##AF124607|RUVBL2|10856|RuvB-like 2 (E. coli)##AF151804|RUVBL2|10856|RuvB-like 2 (E. coli)##AF155138|RUVBL2|10856|RuvB-like 2 (E. coli)##AM393635|RUVBL2|10856|RuvB-like 2 (E. coli)##BC000428|RUVBL2|10856|RuvB-like 2 (E. coli)##Y18417|RUVBL2|10856|RuvB-like 2 (E. coli)##AK057498|RUVBL2|10856|RuvB-like 2 (E. coli)##AL136743|RUVBL2|10856|RuvB-like 2 (E. coli)##DQ891392|RUVBL2|10856|RuvB-like 2 (E. coli)##DQ894568|RUVBL2|10856|RuvB-like 2 (E. coli)##NM_033378|CGB2|114336|chorionic gonadotropin, beta polypeptide 2##BC107143|CGB2|114336|chorionic gonadotropin, beta polypeptide 2##BC069367|CGB2|114336|chorionic gonadotropin, beta polypeptide 2##BC126460|CGB1|114335|chorionic gonadotropin, beta polypeptide 1##BC069367|CGB2|114336|chorionic gonadotropin, beta polypeptide 2##BC107144|CGB1|114335|chorionic gonadotropin, beta polypeptide 1##NM_033377|CGB1|114335|chorionic gonadotropin, beta polypeptide 1##NM_033043|CGB5|93659|chorionic gonadotropin, beta polypeptide 5##BC106059|CGB|1082|chorionic gonadotropin, beta polypeptide##BC022796|CGB|1082|chorionic gonadotropin, beta polypeptide##BC006290|CGB5|93659|chorionic gonadotropin, beta polypeptide 5##BC051378|CGB5|93659|chorionic gonadotropin, beta polypeptide 5	0.990154	CTCF.p2:13:0.990
chr2	159741929	159742061	reg1025648.p1	5.184	+	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	-90160	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-428412	+	TSC_hg19_v1_chr2_+_159313419 BC034473	-428560	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	83152	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	401153	-	AK127551 BC107570 TSC_hg19_v1_chr2_-_160472070	730019	-	AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##BC034473|PKP4|8502|plakophilin 4##BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	0.740157	CTCF.p2:-27:0.740
chr22	24903953	24904062	reg1028448.p2	5.184	+	AK314727 CR627429 CR456375 NM_016327 BC131703 TSC_hg19_v1_chr22_+_24891299 AF163312 AB013885 BC033388 AB528843 BC139840 BC139843 CU013080 CU013368	-12766	+	NM_000675 AK123058 EU036693 AK301420 BC013780	-80442	+	TSC_hg19_v1_chr22_+_24819870 EU036694	-84127	+	CU687038 TSC_hg19_v1_chr22_-_24951093 BC053529 AK296893	47038	-	TSC_hg19_v1_chr22_-_24951145 AK054681 AK294972	47136	-	TSC_hg19_v1_chr22_-_24951160 BC070109 NM_031444	47207	-	AK314727|UPB1|51733|ureidopropionase, beta##CR627429|UPB1|51733|ureidopropionase, beta##CR456375|UPB1|51733|ureidopropionase, beta##NM_016327|UPB1|51733|ureidopropionase, beta##BC131703|UPB1|51733|ureidopropionase, beta##AF163312|UPB1|51733|ureidopropionase, beta##AB013885|UPB1|51733|ureidopropionase, beta##BC033388|UPB1|51733|ureidopropionase, beta##BC139840|UPB1|51733|ureidopropionase, beta##BC139843|UPB1|51733|ureidopropionase, beta##CU013080|UPB1|51733|ureidopropionase, beta##CU013368|UPB1|51733|ureidopropionase, beta##NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor##EU036694|ADORA2A|135|adenosine A2a receptor##BC053529|C22orf13|83606|chromosome 22 open reading frame 13##AK296893|C22orf13|83606|chromosome 22 open reading frame 13##AK054681|C22orf13|83606|chromosome 22 open reading frame 13##AK294972|C22orf13|83606|chromosome 22 open reading frame 13##BC070109|C22orf13|83606|chromosome 22 open reading frame 13##NM_031444|C22orf13|83606|chromosome 22 open reading frame 13	0.0	
chr8	28893126	28893307	reg1027989.p2	5.184	+	TSC_hg19_v1_chr8_+_28748135 AY522342 DQ269478 BC069242 NM_024567	-145089	+	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	-145299	+	NM_001145159 NM_018250	-145519	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	227398	-	AL137704 NM_057158	313105	-	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	314854	-	AY522342|HMBOX1|79618|homeobox containing 1##DQ269478|HMBOX1|79618|homeobox containing 1##BC069242|HMBOX1|79618|homeobox containing 1##NM_024567|HMBOX1|79618|homeobox containing 1##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4	0.486974	CTCF.p2:18:0.487
chr11	119950625	119950717	reg1025537.p2	5.183	+	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	-351289	-	BC037832 NM_006288	-656428	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-656762	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	48875	-	AK299472 TSC_hg19_v1_chr11_-_120008323	57601	-	AB464321 CU675956 EU446943 TSC_hg19_v1_chr11_-_120008772	58084	-	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29##EU446943|TRIM29|23650|tripartite motif containing 29	0.118326	
chr1	155058649	155058746	reg1024507.p1	5.183	+	TSC_hg19_v1_chr1_+_155051392 BC017722 NM_004952 BC110406 U14187 AK296030 AK316248 L37360 DQ891668 DQ894854	-7357	+	TSC_hg19_v1_chr1_+_155036206 NM_005227 NM_182689 NM_182690 BC107483 AK301966 AJ006352 AJ006353 U14188 CR533569	-22447	+	TSC_hg19_v1_chr1_+_155023819 AK308172 AK295614 AK296925 AK297468 U41767 EU176173 AB590397 AY518542 BT009764 U46005	-34861	+	AK057845 TSC_hg19_v1_chr1_+_155099946	41244	+	AK313117 NM_004428 NM_182685 TSC_hg19_v1_chr1_+_155100351 AK289589 AK308965 AL833641 AK311677 BC032698 BC095432 M57730 CR457416 DQ890722 DQ893900	41681	+	TSC_hg19_v1_chr1_+_155108327 AK289551 NM_001122837 NM_001122839 NM_018845 AF126023 BC009621 AF126024 BC012378	49612	+	BC017722|EFNA3|1944|ephrin-A3##NM_004952|EFNA3|1944|ephrin-A3##BC110406|EFNA3|1944|ephrin-A3##U14187|EFNA3|1944|ephrin-A3##AK296030|EFNA3|1944|ephrin-A3##AK316248|EFNA3|1944|ephrin-A3##L37360|EFNA3|1944|ephrin-A3##DQ891668|EFNA3|1944|ephrin-A3##DQ894854|EFNA3|1944|ephrin-A3##NM_005227|EFNA4|1945|ephrin-A4##NM_182689|EFNA4|1945|ephrin-A4##NM_182690|EFNA4|1945|ephrin-A4##BC107483|EFNA4|1945|ephrin-A4##AJ006352|EFNA4|1945|ephrin-A4##AJ006353|EFNA4|1945|ephrin-A4##U14188|EFNA4|1945|ephrin-A4##CR533569|EFNA4|1945|ephrin-A4##AK308172|ADAM15|8751|ADAM metallopeptidase domain 15##AK295614|ADAM15|8751|ADAM metallopeptidase domain 15##AK296925|ADAM15|8751|ADAM metallopeptidase domain 15##AK297468|ADAM15|8751|ADAM metallopeptidase domain 15##U41767|ADAM15|8751|ADAM metallopeptidase domain 15##EU176173|ADAM15|8751|ADAM metallopeptidase domain 15##AY518542|ADAM15|8751|ADAM metallopeptidase domain 15##BT009764|ADAM15|8751|ADAM metallopeptidase domain 15##U46005|ADAM15|8751|ADAM metallopeptidase domain 15##AK057845|EFNA1|1942|ephrin-A1##AK313117|EFNA1|1942|ephrin-A1##NM_004428|EFNA1|1942|ephrin-A1##NM_182685|EFNA1|1942|ephrin-A1##AK289589|EFNA1|1942|ephrin-A1##AL833641|EFNA1|1942|ephrin-A1##BC032698|EFNA1|1942|ephrin-A1##BC095432|EFNA1|1942|ephrin-A1##M57730|EFNA1|1942|ephrin-A1##CR457416|EFNA1|1942|ephrin-A1##DQ890722|EFNA1|1942|ephrin-A1##DQ893900|EFNA1|1942|ephrin-A1##AK289551|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122837|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122839|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_018845|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126023|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC009621|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126024|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC012378|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	0.999934	CTCF.p2:5:1.000
chr20	2853352	2853453	reg1028460.p1	5.183	+	BC126431 M34668 NM_002836 BC064406	-8619	+	BC014247 AK026029 TSC_hg19_v1_chr20_-_2821811	-31602	-	TSC_hg19_v1_chr20_+_2821400 AK055787 NM_022575 NM_080413 AF308801	-32026	+	TSC_hg19_v1_chr20_+_2854126 NM_080840 AK294990 AK297293 BX571753 AB209702 AK290233 AK294499 BC027308 X54890	843	+	NM_080841 X53364 TSC_hg19_v1_chr20_+_2903902	50479	+	TSC_hg19_v1_chr20_+_2944935 CU693258 DQ891155 DQ894334	91524	+	BC126431|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##M34668|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##NM_002836|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BC064406|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##BC014247|FAM113A|64773|family with sequence similarity 113, member A##AK026029|FAM113A|64773|family with sequence similarity 113, member A##AK055787|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##NM_022575|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##NM_080413|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##AF308801|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##NM_080840|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK294990|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK297293|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BX571753|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AB209702|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK290233|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK294499|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BC027308|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##X54890|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##NM_080841|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##X53364|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A	0.044444	
chr2	101868796	101868901	reg1024317.p2	5.183	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	-101065	-	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	-250126	+	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	-432082	+	TSC_hg19_v1_chr2_+_101869347 NM_017546	489	+	TSC_hg19_v1_chr2_+_101869378 AF103798 BC064421 BC018664	544	+	AM392566 AB463234 TSC_hg19_v1_chr2_-_101925153 BC019355 BC032328 AK074985 AK075141 AY450390 BC045743 AK129799 NM_173647	56294	-	AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_017546|C2orf29|55571|chromosome 2 open reading frame 29##AF103798|C2orf29|55571|chromosome 2 open reading frame 29##BC064421|C2orf29|55571|chromosome 2 open reading frame 29##BC018664|C2orf29|55571|chromosome 2 open reading frame 29##AM392566|RNF149|284996|ring finger protein 149##BC019355|RNF149|284996|ring finger protein 149##BC032328|RNF149|284996|ring finger protein 149##AK074985|RNF149|284996|ring finger protein 149##AK075141|RNF149|284996|ring finger protein 149##AY450390|RNF149|284996|ring finger protein 149##BC045743|RNF149|284996|ring finger protein 149##AK129799|RNF149|284996|ring finger protein 149##NM_173647|RNF149|284996|ring finger protein 149	0.0	
chr2	102720883	102721024	reg1026759.p1	5.183	+	BC027733 BC012346 NM_173343	-105496	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	-112590	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	-212421	+	TSC_hg19_v1_chr2_+_102759205 X16896	38279	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	49467	+	AF284434 NM_003854 U49065 BC107064	82495	+	BC027733|IL1R2|7850|interleukin 1 receptor, type II##BC012346|IL1R2|7850|interleukin 1 receptor, type II##NM_173343|IL1R2|7850|interleukin 1 receptor, type II##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##X16896|IL1R1|3554|interleukin 1 receptor, type I##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2	0.0	
chr9	95826753	95826933	reg1025532.p1	5.183	+	TSC_hg19_v1_chr9_+_95821007 CU677063 DQ894024 EU176188 AY358190	-5819	+	TSC_hg19_v1_chr9_+_95820982 BC014601 NM_145006	-5867	+	NM_033086 BX647829 BC111054 AY211386	-90094	+	NM_032310 TSC_hg19_v1_chr9_+_95858498 AK057716 AK091611 AX747094 BC042201 BC038856 BC004500	31637	+	BC091476 TSC_hg19_v1_chr9_+_95858566	31736	+	BT007164 CU690562 U72661 U91512 BC019336 BC004440 BC000298 TSC_hg19_v1_chr9_-_95896534 BC048212 NM_004148	69699	-	DQ894024|SUSD3|203328|sushi domain containing 3##EU176188|SUSD3|203328|sushi domain containing 3##AY358190|SUSD3|203328|sushi domain containing 3##BC014601|SUSD3|203328|sushi domain containing 3##NM_145006|SUSD3|203328|sushi domain containing 3##NM_033086|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BX647829|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BC111054|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AY211386|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##NM_032310|C9orf89|84270|chromosome 9 open reading frame 89##AK057716|C9orf89|84270|chromosome 9 open reading frame 89##AK091611|C9orf89|84270|chromosome 9 open reading frame 89##BC042201|C9orf89|84270|chromosome 9 open reading frame 89##BC038856|C9orf89|84270|chromosome 9 open reading frame 89##BC004500|C9orf89|84270|chromosome 9 open reading frame 89##BC091476|C9orf89|84270|chromosome 9 open reading frame 89##BT007164|NINJ1|4814|ninjurin 1##U72661|NINJ1|4814|ninjurin 1##U91512|NINJ1|4814|ninjurin 1##BC019336|NINJ1|4814|ninjurin 1##BC004440|NINJ1|4814|ninjurin 1##BC000298|NINJ1|4814|ninjurin 1##BC048212|NINJ1|4814|ninjurin 1##NM_004148|NINJ1|4814|ninjurin 1	0.0	
chrX	50790931	50791054	reg1028683.p1	5.183	+	BC117264 BC117266 NM_005448 BC069155 HQ258214	-137234	+	TSC_hg19_v1_chrX_-_50557118 AB033028 BC151240 NM_020717	-233881	-	TSC_hg19_v1_chrX_-_50386679 AY044234	-404315	-	AF469196 NM_153183	284090	+	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	284711	+	AB528198 AM392606 AK001490 TSC_hg19_v1_chrX_-_51239368	448340	-	BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AB033028|SHROOM4|57477|shroom family member 4##BC151240|SHROOM4|57477|shroom family member 4##NM_020717|SHROOM4|57477|shroom family member 4##AY044234|SHROOM4|57477|shroom family member 4##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AM392606|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK001490|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11	0.210182	CTCF.p2:18:0.210
chr10	91226393	91226506	reg1029244.p1	5.182	+	U34605 TSC_hg19_v1_chr10_+_91174502 AK312358 AK293346	-51961	+	TSC_hg19_v1_chr10_+_91174324 NM_012420 BC025786	-52106	+	NM_001548 BC007091 AK314588 AK308688 X03557	-74086	+	CR936657 AK127303 NM_213606	68862	-	AF355198 AY027662 AY027663 NM_138316 NM_148978	177189	-	TSC_hg19_v1_chr10_-_91404973 AK125428	178494	-	U34605|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK312358|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK293346|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##NM_012420|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##BC025786|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##NM_001548|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##BC007091|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK314588|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK308688|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##X03557|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##CR936657|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##AK127303|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##NM_213606|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##AF355198|PANK1|53354|pantothenate kinase 1##AY027662|PANK1|53354|pantothenate kinase 1##AY027663|PANK1|53354|pantothenate kinase 1##NM_138316|PANK1|53354|pantothenate kinase 1##NM_148978|PANK1|53354|pantothenate kinase 1##AK125428|PANK1|53354|pantothenate kinase 1	0.042833	
chr1	235151449	235151629	reg1023497.p1	5.182	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-255765	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-406293	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-407681	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	140550	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	140692	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	173024	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr3	151097287	151097402	reg1025874.p2	5.182	+	AF313449 AF321815 NM_176876	-38833	-	BC041116 JF810883 BC029363 AK313208 NM_176894	-50022	-	AF237763 BC112941 BC117565 AB031548 BC132888 BC132890 AK027784 NM_023915	-62770	-	AK292096 AK303714 AK316575 TSC_hg19_v1_chr3_-_151102542 BC017898 NM_022788	5200	-	AK093069 AX747900 BC031063 BC045734 NM_001178145 NM_001178146	61223	-	AY273815 NM_178822	79152	-	AF313449|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AF321815|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##NM_176876|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##BC041116|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##BC029363|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##AK313208|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##NM_176894|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##AF237763|GPR87|53836|G protein-coupled receptor 87##BC112941|GPR87|53836|G protein-coupled receptor 87##BC117565|GPR87|53836|G protein-coupled receptor 87##AB031548|GPR87|53836|G protein-coupled receptor 87##BC132888|GPR87|53836|G protein-coupled receptor 87##BC132890|GPR87|53836|G protein-coupled receptor 87##AK027784|GPR87|53836|G protein-coupled receptor 87##NM_023915|GPR87|53836|G protein-coupled receptor 87##AK292096|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AK303714|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AK316575|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##BC017898|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##NM_022788|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AK093069|IGSF10|285313|immunoglobulin superfamily, member 10##BC031063|IGSF10|285313|immunoglobulin superfamily, member 10##BC045734|IGSF10|285313|immunoglobulin superfamily, member 10##NM_001178145|IGSF10|285313|immunoglobulin superfamily, member 10##NM_001178146|IGSF10|285313|immunoglobulin superfamily, member 10##AY273815|IGSF10|285313|immunoglobulin superfamily, member 10##NM_178822|IGSF10|285313|immunoglobulin superfamily, member 10	0.600426	CTCF.p2:-2:0.600
chr5	105790525	105790637	reg1026481.p2	5.182	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-2892100	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-3196124	+	BC024591 NM_015216 AB463068	-3325307	+	AK308672 NM_001962 U26403	1216009	-	TSC_hg19_v1_chr5_-_107717106 AK126722	1926549	-	BC063316 NM_001163315	1927217	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.0	
chr11	111325597	111325690	reg1028136.p2	5.181	+	NM_006235	-75487	-	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	-75691	-	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	-155610	+	BC031045 NM_017589	57427	-	AK128145 NM_001100388 NM_207430 BC039505	59879	+	AK055539 NM_178834	85589	+	NM_006235|POU2AF1|5450|POU class 2 associating factor 1##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##BC031045|BTG4|54766|B-cell translocation gene 4##NM_017589|BTG4|54766|B-cell translocation gene 4##AK128145|C11orf88|399949|chromosome 11 open reading frame 88##NM_001100388|C11orf88|399949|chromosome 11 open reading frame 88##NM_207430|C11orf88|399949|chromosome 11 open reading frame 88##BC039505|C11orf88|399949|chromosome 11 open reading frame 88##AK055539|LAYN|143903|layilin##NM_178834|LAYN|143903|layilin	0.956464	CTCF.p2:-38:0.956
chr1	199306616	199306718	reg1024481.p1	5.181	+	TSC_hg19_v1_chr1_-_198906559 EF413001	-400120	-	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-698337	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-698442	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	690202	+	AK316513 TSC_hg19_v1_chr1_+_200011716	705057	+	NM_001105517	875988	+	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene	0.193371	
chr2	70314280	70314461	reg1028861.p4	5.181	+	TSC_hg19_v1_chr2_-_70314146 BC040598	-257	-	TSC_hg19_v1_chr2_-_70313405 AK056822	-962	-	AK055994 NM_152792	-124974	-	TSC_hg19_v1_chr2_+_70314613 NM_006196	224	+	TSC_hg19_v1_chr2_+_70314696 U24223	333	+	TSC_hg19_v1_chr2_+_70314716 AK314225	348	+	BC040598|PCBP1-AS1|400960|PCBP1 antisense RNA 1 (non-protein coding)##AK056822|PCBP1-AS1|400960|PCBP1 antisense RNA 1 (non-protein coding)##AK055994|ASPRV1|151516|aspartic peptidase, retroviral-like 1##NM_152792|ASPRV1|151516|aspartic peptidase, retroviral-like 1##NM_006196|PCBP1|5093|poly(rC) binding protein 1##U24223|PCBP1|5093|poly(rC) binding protein 1##AK314225|PCBP1|5093|poly(rC) binding protein 1	0.0	
chr3	138634751	138634881	reg1003333.p2	5.181	+	AB384841 BC114432 NM_006219 S67334	-156632	-	AK001444 NM_018147	-306898	+	NM_001033030 NM_001033031 NM_001033032 TSC_hg19_v1_chr3_+_138327638 BC012478	-307200	+	BC062549 NM_023067	31165	-	AK125319 NM_001040061	31259	+	NM_001134659	90293	-	BC114432|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##NM_006219|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##S67334|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##AK001444|FAIM|55179|Fas apoptotic inhibitory molecule##NM_018147|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033030|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033031|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033032|FAIM|55179|Fas apoptotic inhibitory molecule##BC012478|FAIM|55179|Fas apoptotic inhibitory molecule##BC062549|FOXL2|668|forkhead box L2##NM_023067|FOXL2|668|forkhead box L2##AK125319|C3orf72|401089|chromosome 3 open reading frame 72##NM_001040061|C3orf72|401089|chromosome 3 open reading frame 72##NM_001134659|PRR23A|729627|proline rich 23A	0.0	
chr5	131746671	131746847	reg1025572.p1	5.181	+	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-131	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-41251	+	BX538252 TSC_hg19_v1_chr5_-_131705330	-41460	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	79722	-	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	132433	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	145881	+	AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BX538252|LOC553103|553103|uncharacterized LOC553103##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)	0.0	
chr10	100022434	100022525	reg1026966.p1	5.180	+	TSC_hg19_v1_chr10_+_99894427 AF525304 BC047908 BC098175 BC098268 BC098359 BC099848	-128044	+	NM_014472 AK292546 TSC_hg19_v1_chr10_+_99894414	-128082	+	AK057190 NM_001206528 NM_018058	-231895	-	TSC_hg19_v1_chr10_-_100027952 AK172781 BC013153 BC035470 NM_032211	5513	-	CU675263 DQ893418 DQ896787 AK075265 TSC_hg19_v1_chr10_-_100174919 AK225637 AK074429 BC006131 AK295699 NM_032709	152455	-	BC002514 TSC_hg19_v1_chr10_-_100206650	184167	-	AF525304|C10orf28|27291|chromosome 10 open reading frame 28##BC047908|C10orf28|27291|chromosome 10 open reading frame 28##BC098175|C10orf28|27291|chromosome 10 open reading frame 28##BC098268|C10orf28|27291|chromosome 10 open reading frame 28##BC098359|C10orf28|27291|chromosome 10 open reading frame 28##BC099848|C10orf28|27291|chromosome 10 open reading frame 28##NM_014472|C10orf28|27291|chromosome 10 open reading frame 28##AK292546|C10orf28|27291|chromosome 10 open reading frame 28##AK057190|CRTAC1|55118|cartilage acidic protein 1##NM_001206528|CRTAC1|55118|cartilage acidic protein 1##NM_018058|CRTAC1|55118|cartilage acidic protein 1##AK172781|LOXL4|84171|lysyl oxidase-like 4##BC013153|LOXL4|84171|lysyl oxidase-like 4##BC035470|LOXL4|84171|lysyl oxidase-like 4##NM_032211|LOXL4|84171|lysyl oxidase-like 4##DQ893418|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##DQ896787|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK075265|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK225637|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK074429|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##BC006131|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK295699|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##NM_032709|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1	0.99361	CTCF.p2:1:0.994
chr13	47128767	47128947	reg1026216.p3	5.180	+	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-1350	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-1437	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	-1534	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	242458	-	AK314132 BX647777 AK302787 NM_000621 NM_001165947	342210	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1446594	-	HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.0	
chr15	85904690	85904797	reg1026279.p2	5.180	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-238425	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-379417	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-379506	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	19148	+	AF127481 NM_144767	315524	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	433354	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	0.0	
chr17	70002054	70002158	reg1023099.p1	5.180	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-1836410	+	BC033038 NM_170742	-1901112	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-1930676	+	TSC_hg19_v1_chr17_-_70116937 AL833139	114832	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	115053	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	115064	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.085028	
chr17	72375862	72375996	reg1000160.p2	5.180	+	BC143807 AB196530 AB528868 AY288421 NM_181790	-12335	+	NM_001080466	-17972	-	NM_153209 TSC_hg19_v1_chr17_+_72322355 BC067749 BC026362 BC110989 AK094619 BC143327 BC093631 BC104852	-53522	+	BC110848 BC004925 BC069202 NM_022036 BC125080 BC125081	51675	+	AK075397 AF207989 AK222909 TSC_hg19_v1_chr17_+_72428254 AK000249	52326	+	AJ276102 NM_018653	53906	+	BC143807|GPR142|350383|G protein-coupled receptor 142##AB196530|GPR142|350383|G protein-coupled receptor 142##AY288421|GPR142|350383|G protein-coupled receptor 142##NM_181790|GPR142|350383|G protein-coupled receptor 142##NM_001080466|BTBD17|388419|BTB (POZ) domain containing 17##NM_153209|KIF19|124602|kinesin family member 19##BC067749|KIF19|124602|kinesin family member 19##BC026362|KIF19|124602|kinesin family member 19##BC110989|KIF19|124602|kinesin family member 19##AK094619|KIF19|124602|kinesin family member 19##BC143327|KIF19|124602|kinesin family member 19##BC093631|KIF19|124602|kinesin family member 19##BC104852|KIF19|124602|kinesin family member 19##BC110848|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC004925|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC069202|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_022036|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125080|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##BC125081|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AJ276102|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_018653|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C	0.0	
chr3	149470354	149470515	reg1021910.p1	5.180	+	TSC_hg19_v1_chr3_-_149470277 AF059618 BC001228 BC022206 AF125096 BC093077 NM_016094	-164	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	-195	-	AK022036 NM_001168278	-49375	-	BC171805 NM_001144960	40175	-	TSC_hg19_v1_chr3_+_149530500 NM_007282 NM_183381 AK090638	60043	+	TSC_hg19_v1_chr3_+_149530987 AK313304	60552	+	AF059618|COMMD2|51122|COMM domain containing 2##BC001228|COMMD2|51122|COMM domain containing 2##BC022206|COMMD2|51122|COMM domain containing 2##AF125096|COMMD2|51122|COMM domain containing 2##BC093077|COMMD2|51122|COMM domain containing 2##NM_016094|COMMD2|51122|COMM domain containing 2##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##BC171805|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1##NM_001144960|ANKUB1|389161|ankyrin repeat and ubiquitin domain containing 1##NM_007282|RNF13|11342|ring finger protein 13##NM_183381|RNF13|11342|ring finger protein 13##AK090638|RNF13|11342|ring finger protein 13##AK313304|RNF13|11342|ring finger protein 13	0.011738	
chr7	33797297	33797431	reg1027777.p1	5.180	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-628283	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-648387	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-695042	-	AK289963 NM_133468 AK096150 BC060868	147778	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	900555	+	DQ287932 NM_015283	1280288	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	0.987906	CTCF.p2:10:0.988
chr7	70185582	70185697	reg1025430.p2	5.180	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-1121051	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-1121310	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-1121803	+	TSC_hg19_v1_chr7_+_70231164 AK296981	45566	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	412149	+	AK123862 TSC_hg19_v1_chr7_-_71801809	1616139	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.019661	
chr8	130564677	130564788	reg1019786.p1	5.180	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1757949	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1816242	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1816407	+	AB042405 NM_031415	234401	-	BC003599 TSC_hg19_v1_chr8_-_130951934	387183	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	387274	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.440418	CTCF.p2:-69:0.440
chr5	149829574	149829723	reg1027088.p1	5.179	+	TSC_hg19_v1_chr5_-_149829301 BC003401 BC001126 BC006784 BC110792 AK312179 BC091474 NM_001025070 NM_001025071 NM_005617	-357	-	TSC_hg19_v1_chr5_-_149829249 BC020515	-404	-	TSC_hg19_v1_chr5_-_149792474 NM_001025158 NM_001025159 NM_004355	-37198	-	TSC_hg19_v1_chr5_+_149865341 AB209107	35791	+	AK292448 NM_001543 U36600	58065	+	TSC_hg19_v1_chr5_+_149980641 AL831818 NM_001166208	150994	+	BC003401|RPS14|6208|ribosomal protein S14##BC001126|RPS14|6208|ribosomal protein S14##BC006784|RPS14|6208|ribosomal protein S14##BC110792|RPS14|6208|ribosomal protein S14##AK312179|RPS14|6208|ribosomal protein S14##BC091474|RPS14|6208|ribosomal protein S14##NM_001025070|RPS14|6208|ribosomal protein S14##NM_001025071|RPS14|6208|ribosomal protein S14##NM_005617|RPS14|6208|ribosomal protein S14##BC020515|RPS14|6208|ribosomal protein S14##NM_001025158|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##NM_001025159|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##NM_004355|CD74|972|CD74 molecule, major histocompatibility complex, class II invariant chain##AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##AK292448|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##NM_001543|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##U36600|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##AL831818|SYNPO|11346|synaptopodin##NM_001166208|SYNPO|11346|synaptopodin	0.0	
chr6	103721032	103721212	reg1027418.p1	5.179	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	-1874217	+	BC037954 TSC_hg19_v1_chr6_+_101846686	-1874445	+	HM149340 TSC_hg19_v1_chr6_+_101841583	-1879616	+	TSC_hg19_v1_chr6_-_105307736 AK291760	1586603	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	1586640	-	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	1586666	-	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	0.811489	CTCF.p2:2:0.811
chr7	27219453	27219606	reg1027242.p1	5.179	+	AB464570 DQ891906 DQ895092 DQ896836 TSC_hg19_v1_chr7_-_27213940 BC007600 BC013971 NM_018951	-5616	-	NM_152739 TSC_hg19_v1_chr7_-_27205157	-14375	-	TSC_hg19_v1_chr7_-_27205124 BC006537 BC010023	-14403	-	TSC_hg19_v1_chr7_+_27224163 DQ655923	4695	+	AB464571 EU446480 TSC_hg19_v1_chr7_-_27224852 AK313921 BC040948 NM_005523 BC033706	5312	-	TSC_hg19_v1_chr7_+_27225046 BC025338	5504	+	DQ891906|HOXA10|3206|homeobox A10##DQ895092|HOXA10|3206|homeobox A10##DQ896836|HOXA10|3206|homeobox A10##BC007600|HOXA10|3206|homeobox A10##BC013971|HOXA10|3206|homeobox A10##NM_018951|HOXA10|3206|homeobox A10##NM_152739|HOXA9|3205|homeobox A9##BC006537|HOXA9|3205|homeobox A9##BC010023|HOXA9|3205|homeobox A9##EU446480|HOXA11|3207|homeobox A11##AK313921|HOXA11|3207|homeobox A11##BC040948|HOXA11|3207|homeobox A11##NM_005523|HOXA11|3207|homeobox A11##BC033706|HOXA11|3207|homeobox A11##BC025338|HOXA11-AS1|221883|HOXA11 antisense RNA 1 (non-protein coding)	0.953874	CTCF.p2:1:0.954
chr9	66366963	66367095	reg1024057.p1	5.179	+	BC040528 NM_001113541 NM_015667	-857420	-	TSC_hg19_v1_chr9_+_45441926 BC006438	-20925103	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-22682186	+	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	90272	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	91467	-	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	127167	-	BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##AB593083|LOC100132249|100132249|uncharacterized LOC100132249	1.419076	CTCF.p2:26:0.981	CTCF.p2:80:0.438
chr15	75405355	75405535	reg1019807.p2	5.177	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-89464	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-89517	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-117538	+	AK128205 TSC_hg19_v1_chr15_+_75491259	85801	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	88767	+	BC110367 TSC_hg19_v1_chr15_+_75494233	88788	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chr18	56338263	56338443	reg1023224.p1	5.177	+	BX647796 NM_052947	-42165	-	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-449503	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-449550	+	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	288	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	375	+	TSC_hg19_v1_chr18_+_56338790 AB026118	444	+	BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AB026118|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.0	
chr10	26727520	26727700	reg1022863.p4	5.176	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	-293	+	TSC_hg19_v1_chr10_+_26727269 NM_019043	-339	+	M74826 BC029517 M81882 TSC_hg19_v1_chr10_+_26505702 BC126327 BC126329 AB527954 HQ258311	-221945	+	TSC_hg19_v1_chr10_+_26727679 BC054516	58	+	TSC_hg19_v1_chr10_+_26727703 AY152730	96	+	AK096048 TSC_hg19_v1_chr10_-_26986612	258974	-	AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##NM_019043|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##HQ258311|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AY152730|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	0.0	
chr10	31998001	31998118	reg1027565.p1	5.176	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-387970	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-389926	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-390102	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	219665	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	219726	-	TSC_hg19_v1_chr10_-_32344938 AB462413	346873	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.071274	
chr10	74080564	74080745	reg1024596.p2	5.176	+	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-46830	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-104543	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-104866	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	34024	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	34272	-	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	203065	-	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1	0.0	
chr13	46038755	46038884	reg1028925.p1	5.176	+	TSC_hg19_v1_chr13_-_45992486 BC132739 BC136760 BC144401 AK094133 AK095465 AK302967 NM_001010875	-46325	-	TSC_hg19_v1_chr13_-_45992456 BC129808	-46359	-	AF318337 TSC_hg19_v1_chr13_+_45915726 AK124332	-123206	+	TSC_hg19_v1_chr13_+_46039081 NM_031431 AF349676 AF332595 AK026305 AK225466 AK225952 BX648211 AK294959 AK304248 AK314387 BC038953 CU691622	278	+	BC131494 AK057244 NM_182542	151046	-	AK093129 AX747942 NM_152719	237626	+	BC132739|SLC25A30|253512|solute carrier family 25, member 30##BC136760|SLC25A30|253512|solute carrier family 25, member 30##BC144401|SLC25A30|253512|solute carrier family 25, member 30##AK094133|SLC25A30|253512|solute carrier family 25, member 30##AK095465|SLC25A30|253512|solute carrier family 25, member 30##AK302967|SLC25A30|253512|solute carrier family 25, member 30##NM_001010875|SLC25A30|253512|solute carrier family 25, member 30##BC129808|SLC25A30|253512|solute carrier family 25, member 30##AF318337|LOC100190939|100190939|uncharacterized LOC100190939##AK124332|LOC100190939|100190939|uncharacterized LOC100190939##NM_031431|COG3|83548|component of oligomeric golgi complex 3##AF349676|COG3|83548|component of oligomeric golgi complex 3##AF332595|COG3|83548|component of oligomeric golgi complex 3##AK026305|COG3|83548|component of oligomeric golgi complex 3##AK225466|COG3|83548|component of oligomeric golgi complex 3##AK225952|COG3|83548|component of oligomeric golgi complex 3##BX648211|COG3|83548|component of oligomeric golgi complex 3##AK294959|COG3|83548|component of oligomeric golgi complex 3##AK304248|COG3|83548|component of oligomeric golgi complex 3##AK314387|COG3|83548|component of oligomeric golgi complex 3##BC038953|COG3|83548|component of oligomeric golgi complex 3##BC131494|FAM194B|220081|family with sequence similarity 194, member B##AK057244|FAM194B|220081|family with sequence similarity 194, member B##NM_182542|FAM194B|220081|family with sequence similarity 194, member B##AK093129|SPERT|220082|spermatid associated##NM_152719|SPERT|220082|spermatid associated	0.0	
chr1	68577617	68577715	reg1026824.p1	5.176	+	BC005362 U96750 NM_004675	-61281	-	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	-278556	-	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	-279678	+	TSC_hg19_v1_chr1_-_68698207 BC137109 BC137113 BC110826 AB097018 AK074984 AK301613 BX648748 BX538320 NM_001002292 NM_001193334 AK074583 AK309779 DQ323735 AY359035 NM_024911	120491	-	AK289925 BC075035 BC075036 NM_000329 U18991	337970	-	CU688044 BC065304 BC011743 BC035506 BC041580 TSC_hg19_v1_chr1_-_68962723	385035	-	BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK124028|LOC100289178|100289178|uncharacterized LOC100289178##BC137109|WLS|79971|wntless homolog (Drosophila)##BC137113|WLS|79971|wntless homolog (Drosophila)##BC110826|WLS|79971|wntless homolog (Drosophila)##AB097018|WLS|79971|wntless homolog (Drosophila)##AK074984|WLS|79971|wntless homolog (Drosophila)##AK301613|WLS|79971|wntless homolog (Drosophila)##BX648748|WLS|79971|wntless homolog (Drosophila)##BX538320|WLS|79971|wntless homolog (Drosophila)##NM_001002292|WLS|79971|wntless homolog (Drosophila)##NM_001193334|WLS|79971|wntless homolog (Drosophila)##AK074583|WLS|79971|wntless homolog (Drosophila)##AK309779|WLS|79971|wntless homolog (Drosophila)##DQ323735|WLS|79971|wntless homolog (Drosophila)##AY359035|WLS|79971|wntless homolog (Drosophila)##NM_024911|WLS|79971|wntless homolog (Drosophila)##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC065304|DEPDC1|55635|DEP domain containing 1##BC011743|DEPDC1|55635|DEP domain containing 1##BC035506|DEPDC1|55635|DEP domain containing 1##BC041580|DEPDC1|55635|DEP domain containing 1	0.0	
chr17	32965326	32965410	reg1006599.p1	5.176	+	NM_207313	-57601	+	BC133004 BC136710 BC142651 AK126768 NM_207454	-59016	-	AB528767 BC105073 BC105075 M57502 AK312183 NM_002981	-275153	-	CU693272 AK301773 TSC_hg19_v1_chr17_-_33288425 AK225729 BC026125 AK225728 D78333	323067	-	TSC_hg19_v1_chr17_-_33288480 AK302344 BC027591 NM_001193529 NM_001193530 NM_006584	323134	-	TSC_hg19_v1_chr17_+_33288558 AK315671 NM_052857 AK055707 AB590460 BC002913 BC011584 DQ892326 DQ895528	323221	+	NM_207313|TMEM132E|124842|transmembrane protein 132E##BC133004|C17orf102|400591|chromosome 17 open reading frame 102##BC136710|C17orf102|400591|chromosome 17 open reading frame 102##BC142651|C17orf102|400591|chromosome 17 open reading frame 102##AK126768|C17orf102|400591|chromosome 17 open reading frame 102##NM_207454|C17orf102|400591|chromosome 17 open reading frame 102##BC105073|CCL1|6346|chemokine (C-C motif) ligand 1##BC105075|CCL1|6346|chemokine (C-C motif) ligand 1##M57502|CCL1|6346|chemokine (C-C motif) ligand 1##AK312183|CCL1|6346|chemokine (C-C motif) ligand 1##NM_002981|CCL1|6346|chemokine (C-C motif) ligand 1##AK301773|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225729|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC026125|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225728|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##D78333|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK302344|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC027591|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193529|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193530|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_006584|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK315671|ZNF830|91603|zinc finger protein 830##NM_052857|ZNF830|91603|zinc finger protein 830##AK055707|ZNF830|91603|zinc finger protein 830##BC002913|ZNF830|91603|zinc finger protein 830##BC011584|ZNF830|91603|zinc finger protein 830##DQ892326|ZNF830|91603|zinc finger protein 830##DQ895528|ZNF830|91603|zinc finger protein 830	0.984559	
chr17	48628322	48628471	reg1033581.p1	5.176	+	AK092731 TSC_hg19_v1_chr17_+_48624553 BC111029 AK025000 AK225189 AK291805 BC025255 NM_022827 BC065526 AK308616	-3838	+	TSC_hg19_v1_chr17_+_48610095 AK000785 AK291658 AK292977 AK295730 AK296346 AK300642 BC001038 BC051365 BC077722	-18293	+	TSC_hg19_v1_chr17_+_48610049 NM_017957	-18349	+	TSC_hg19_v1_chr17_+_48638339 BC110995 AF124351 NM_018896 NM_198376 NM_198377 NM_198378 NM_198379 NM_198380 NM_198382 NM_198383 NM_198384 NM_198385 NM_198386 NM_198387 NM_198388 NM_198396 NM_198397	9997	+	TSC_hg19_v1_chr17_+_48712188 BC046126 NM_001144070 NM_003786 AF009670 Y17151 BC058907 AF085690 AF085691 AF085692 BC104952 BC137347 BC137348 AB208954 AF083552 AB010887 BC050370 AF104943 AB384796	83813	+	AK314010 CR627413 TSC_hg19_v1_chr17_-_48785180 BC012978 EU164539 NM_052855	156747	-	AK092731|SPATA20|64847|spermatogenesis associated 20##BC111029|SPATA20|64847|spermatogenesis associated 20##AK025000|SPATA20|64847|spermatogenesis associated 20##AK225189|SPATA20|64847|spermatogenesis associated 20##AK291805|SPATA20|64847|spermatogenesis associated 20##BC025255|SPATA20|64847|spermatogenesis associated 20##NM_022827|SPATA20|64847|spermatogenesis associated 20##BC065526|SPATA20|64847|spermatogenesis associated 20##AK308616|SPATA20|64847|spermatogenesis associated 20##AK000785|EPN3|55040|epsin 3##AK291658|EPN3|55040|epsin 3##AK292977|EPN3|55040|epsin 3##AK295730|EPN3|55040|epsin 3##AK296346|EPN3|55040|epsin 3##AK300642|EPN3|55040|epsin 3##BC001038|EPN3|55040|epsin 3##BC051365|EPN3|55040|epsin 3##BC077722|EPN3|55040|epsin 3##NM_017957|EPN3|55040|epsin 3##BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##BC046126|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_001144070|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_003786|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF009670|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##Y17151|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC058907|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085690|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085691|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085692|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC104952|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137347|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137348|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB208954|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF083552|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB010887|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC050370|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF104943|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AK314010|ANKRD40|91369|ankyrin repeat domain 40##CR627413|ANKRD40|91369|ankyrin repeat domain 40##BC012978|ANKRD40|91369|ankyrin repeat domain 40##EU164539|ANKRD40|91369|ankyrin repeat domain 40##NM_052855|ANKRD40|91369|ankyrin repeat domain 40	0.078647	
chr2	242211268	242211449	reg1019861.p1	5.176	+	AY617079 AY617080 NM_001001666 NM_001001891	-83435	+	AK294043 TSC_hg19_v1_chr2_+_242089896 BC013001 BC000910 NM_002712 Z50749 BC012397 AB385583 BT007296 BT020134	-121467	+	CR749231 NM_001252120	-121965	-	TSC_hg19_v1_chr2_-_242212216 M64098	862	-	TSC_hg19_v1_chr2_-_242212245 AK300312 NM_001243900 NM_203346	886	-	TSC_hg19_v1_chr2_-_242212511 AK309075	1158	-	AY617079|ANO7|50636|anoctamin 7##AY617080|ANO7|50636|anoctamin 7##NM_001001666|ANO7|50636|anoctamin 7##NM_001001891|ANO7|50636|anoctamin 7##AK294043|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC013001|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC000910|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##NM_002712|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##Z50749|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC012397|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT007296|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT020134|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##CR749231|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252120|PASK|23178|PAS domain containing serine/threonine kinase##M64098|HDLBP|3069|high density lipoprotein binding protein##AK300312|HDLBP|3069|high density lipoprotein binding protein##NM_001243900|HDLBP|3069|high density lipoprotein binding protein##NM_203346|HDLBP|3069|high density lipoprotein binding protein##AK309075|HDLBP|3069|high density lipoprotein binding protein	0.013472	
chr17	27003123	27003225	reg1023515.p1	5.175	+	TSC_hg19_v1_chr17_+_26989239 BC150268 D79984 NM_003170 BC136522 BC136524	-13907	+	TSC_hg19_v1_chr17_+_26989222 AL833607	-13965	+	TSC_hg19_v1_chr17_-_26989199 NM_006923	-13978	-	BC029574 NM_152465	35697	-	TSC_hg19_v1_chr17_-_27044728 BC016841 AK074689 NM_001144942 NM_031934	41643	-	AF327350 AK297850 AK027312 AJ277106 AK304633 BC066904 NM_001142624 NM_001142625 NM_001144943	42054	-	BC150268|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)##D79984|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)##NM_003170|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)##BC136522|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)##BC136524|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)##AL833607|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)##NM_006923|SDF2|6388|stromal cell-derived factor 2##BC029574|PROCA1|147011|protein interacting with cyclin A1##NM_152465|PROCA1|147011|protein interacting with cyclin A1##BC016841|RAB34|83871|RAB34, member RAS oncogene family##AK074689|RAB34|83871|RAB34, member RAS oncogene family##NM_001144942|RAB34|83871|RAB34, member RAS oncogene family##NM_031934|RAB34|83871|RAB34, member RAS oncogene family##AF327350|RAB34|83871|RAB34, member RAS oncogene family##AK297850|RAB34|83871|RAB34, member RAS oncogene family##AK027312|RAB34|83871|RAB34, member RAS oncogene family##AJ277106|RAB34|83871|RAB34, member RAS oncogene family##AK304633|RAB34|83871|RAB34, member RAS oncogene family##BC066904|RAB34|83871|RAB34, member RAS oncogene family##NM_001142624|RAB34|83871|RAB34, member RAS oncogene family##NM_001142625|RAB34|83871|RAB34, member RAS oncogene family##NM_001144943|RAB34|83871|RAB34, member RAS oncogene family	0.957529	CTCF.p2:-4:0.958
chr22	20925933	20926055	reg1026546.p1	5.175	+	TSC_hg19_v1_chr22_+_20918811 U80745	-7170	+	BC017110 TSC_hg19_v1_chr22_+_20909388	-16687	+	AB463109 CU013137 CU013425 AF328769 TSC_hg19_v1_chr22_+_20861965	-64030	+	L36151 NM_002650	162960	-	TSC_hg19_v1_chr22_+_21128411 NM_000185 AK314200 AK225292 BC035028	202402	+	AB384703 TSC_hg19_v1_chr22_-_21213029 AK302424	287036	-	U80745|MED15|51586|mediator complex subunit 15##BC017110|MED15|51586|mediator complex subunit 15##CU013137|MED15|51586|mediator complex subunit 15##CU013425|MED15|51586|mediator complex subunit 15##AF328769|MED15|51586|mediator complex subunit 15##L36151|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_002650|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_000185|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK314200|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK225292|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##BC035028|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK302424|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha	0.997448	CTCF.p2:-29:0.997
chr4	84827207	84827322	reg1031055.p1	5.175	+	TSC_hg19_v1_chr4_+_84457420 DQ345298 BC090956 AY358100 NM_032717 DQ324782	-369683	+	TSC_hg19_v1_chr4_+_84457260 AK055749 AK223543	-369992	+	BC016905 TSC_hg19_v1_chr4_-_84406254 EF531340 BC039573 AY358576 AK022704 AK023676 NM_139076	-420990	-	NM_006168	592122	-	NM_001263 U65887	676829	+	NM_014991	1060279	-	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK055749|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK223543|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC016905|FAM175A|84142|family with sequence similarity 175, member A##EF531340|FAM175A|84142|family with sequence similarity 175, member A##BC039573|FAM175A|84142|family with sequence similarity 175, member A##AY358576|FAM175A|84142|family with sequence similarity 175, member A##AK022704|FAM175A|84142|family with sequence similarity 175, member A##AK023676|FAM175A|84142|family with sequence similarity 175, member A##NM_139076|FAM175A|84142|family with sequence similarity 175, member A##NM_006168|NKX6-1|4825|NK6 homeobox 1##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3	0.908178	CTCF.p2:21:0.908
chr8	53001715	53001810	reg1025595.p1	5.175	+	AK299452 TSC_hg19_v1_chr8_+_52812239	-189539	+	TSC_hg19_v1_chr8_-_52811724 NM_052937	-190035	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	-190160	-	BC026316 AB011107 AK311188 BC031075 NM_014682 BC025662	320558	-	BC130641 BC130643 BC144534 AY358213 NM_207413	476231	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	625224	-	NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC130641|FAM150A|389658|family with sequence similarity 150, member A##BC130643|FAM150A|389658|family with sequence similarity 150, member A##BC144534|FAM150A|389658|family with sequence similarity 150, member A##AY358213|FAM150A|389658|family with sequence similarity 150, member A##NM_207413|FAM150A|389658|family with sequence similarity 150, member A##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1	0.0	
chr11	124958907	124959027	reg1029086.p2	5.174	+	TSC_hg19_v1_chr11_+_124933200 AK290314 AK074100 BC051314 CU690800	-25737	+	TSC_hg19_v1_chr11_+_124933012 AK074207 NM_001145290 NM_198277	-25948	+	TSC_hg19_v1_chr11_+_124824093 BC018540	-134861	+	NM_001080546	14237	-	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	22502	-	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	75611	+	AK290314|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##AK074100|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##BC051314|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##AK074207|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##NM_001145290|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##NM_198277|SLC37A2|219855|solute carrier family 37 (glycerol-3-phosphate transporter), member 2##BC018540|CCDC15|80071|coiled-coil domain containing 15##NM_001080546|TMEM218|219854|transmembrane protein 218##BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2	0.878608	CTCF.p2:27:0.879
chr14	100991338	100991437	reg1026091.p1	5.174	+	TSC_hg19_v1_chr14_+_100842812 NM_001161476 BX248767 AK291960 NM_024515 BC067872 AY295082	-148549	+	TSC_hg19_v1_chr14_-_100842681 NM_173701 NM_213645	-148707	-	TSC_hg19_v1_chr14_-_100842665 AK291141	-148734	-	AB527893 CU678064 EU832622 EU832695 NM_001159531	42946	-	BC002607 NM_020836	44743	-	TSC_hg19_v1_chr14_+_101193228 NM_003836 AK289384 AK297918 AK313258 BC007741 BC014015	201836	+	NM_001161476|WDR25|79446|WD repeat domain 25##BX248767|WDR25|79446|WD repeat domain 25##AK291960|WDR25|79446|WD repeat domain 25##NM_024515|WDR25|79446|WD repeat domain 25##BC067872|WDR25|79446|WD repeat domain 25##AY295082|WDR25|79446|WD repeat domain 25##NM_173701|WARS|7453|tryptophanyl-tRNA synthetase##NM_213645|WARS|7453|tryptophanyl-tRNA synthetase##AK291141|WARS|7453|tryptophanyl-tRNA synthetase##EU832622|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832695|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001159531|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##BC002607|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_020836|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_003836|DLK1|8788|delta-like 1 homolog (Drosophila)##AK289384|DLK1|8788|delta-like 1 homolog (Drosophila)##AK297918|DLK1|8788|delta-like 1 homolog (Drosophila)##AK313258|DLK1|8788|delta-like 1 homolog (Drosophila)##BC007741|DLK1|8788|delta-like 1 homolog (Drosophila)##BC014015|DLK1|8788|delta-like 1 homolog (Drosophila)	0.873967	CTCF.p2:-27:0.862
chr1	63372147	63372276	reg1027357.p1	5.174	+	TSC_hg19_v1_chr1_+_63249807 NM_032852 NM_178221 AK027773 BC018678 BC033024 BC008395	-122398	+	DQ341187 TSC_hg19_v1_chr1_-_63154045 AK055401 NM_033407 AK292640	-218084	-	NM_014495 AK315304 TSC_hg19_v1_chr1_+_63063190 AK289426 BC007059 BC058287 AY358273 AF152562 AB590604 CU691298	-309000	+	AB464527 NM_012183	416518	+	TSC_hg19_v1_chr1_+_63789065 L12142	416873	+	NM_013339 AF063604 TSC_hg19_v1_chr1_+_63833313	461076	+	NM_032852|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_178221|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##AK027773|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC018678|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC033024|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC008395|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##DQ341187|DOCK7|85440|dedicator of cytokinesis 7##AK055401|DOCK7|85440|dedicator of cytokinesis 7##NM_033407|DOCK7|85440|dedicator of cytokinesis 7##AK292640|DOCK7|85440|dedicator of cytokinesis 7##NM_014495|ANGPTL3|27329|angiopoietin-like 3##AK315304|ANGPTL3|27329|angiopoietin-like 3##AK289426|ANGPTL3|27329|angiopoietin-like 3##BC007059|ANGPTL3|27329|angiopoietin-like 3##BC058287|ANGPTL3|27329|angiopoietin-like 3##AY358273|ANGPTL3|27329|angiopoietin-like 3##AF152562|ANGPTL3|27329|angiopoietin-like 3##NM_012183|FOXD3|27022|forkhead box D3##L12142|FOXD3|27022|forkhead box D3##NM_013339|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF063604|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	0.0	
chr17	1974049	1974230	reg1026112.p2	5.174	+	DQ187313 NM_001098202	-14582	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-15741	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-28831	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	232673	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	232901	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	233113	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.946161	CTCF.p2:2:0.946
chr3	134097305	134097420	reg1026532.p1	5.174	+	TSC_hg19_v1_chr3_-_134093290 AK223598 AK001343 AB023206 AK291616 NM_016201	-3997	-	TSC_hg19_v1_chr3_-_133969650 NM_001005861 NM_002958 X69970 X96588	-127736	-	TSC_hg19_v1_chr3_-_133969397 AB527382	-127898	-	AK290761 TSC_hg19_v1_chr3_-_134204548	107168	-	TSC_hg19_v1_chr3_+_134204601 NM_001042383 NM_001042384 BC014050 AK023738	107232	+	TSC_hg19_v1_chr3_-_134204828 AK026550 BC005398 AL050051 NM_001242375	107462	-	AK223598|AMOTL2|51421|angiomotin like 2##AK001343|AMOTL2|51421|angiomotin like 2##AB023206|AMOTL2|51421|angiomotin like 2##AK291616|AMOTL2|51421|angiomotin like 2##NM_016201|AMOTL2|51421|angiomotin like 2##NM_001005861|RYK|6259|RYK receptor-like tyrosine kinase##NM_002958|RYK|6259|RYK receptor-like tyrosine kinase##X69970|RYK|6259|RYK receptor-like tyrosine kinase##X96588|RYK|6259|RYK receptor-like tyrosine kinase##AK290761|ANAPC13|25847|anaphase promoting complex subunit 13##NM_001042383|CEP63|80254|centrosomal protein 63kDa##NM_001042384|CEP63|80254|centrosomal protein 63kDa##BC014050|CEP63|80254|centrosomal protein 63kDa##AK023738|CEP63|80254|centrosomal protein 63kDa##AK026550|ANAPC13|25847|anaphase promoting complex subunit 13##BC005398|ANAPC13|25847|anaphase promoting complex subunit 13##AL050051|ANAPC13|25847|anaphase promoting complex subunit 13##NM_001242375|ANAPC13|25847|anaphase promoting complex subunit 13	0.793419	CTCF.p2:49:0.793
chr14	70082480	70082660	reg1022609.p2	5.173	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	-4179	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	-4260	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	-131090	+	TSC_hg19_v1_chr14_+_70233809 BX640605	151236	+	BC095420 TSC_hg19_v1_chr14_+_70233810	151240	+	TSC_hg19_v1_chr14_+_70233856 AK311805 NM_001039465 NM_006925	151264	+	D87434|KIAA0247|9766|KIAA0247##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BX640605|SRSF5|6430|serine/arginine-rich splicing factor 5##BC095420|SRSF5|6430|serine/arginine-rich splicing factor 5##AK311805|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_001039465|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_006925|SRSF5|6430|serine/arginine-rich splicing factor 5	0.0	
chr16	30905548	30905631	reg1021055.p1	5.173	+	TSC_hg19_v1_chr16_-_30905474 BC058863	-53	-	TSC_hg19_v1_chr16_-_30905377 BC019071 NM_004765	-194	-	BC010017 AJ223980 CU691314 TSC_hg19_v1_chr16_-_30905327	-288	-	BC064416 NM_001142544 NM_001330 U43030 TSC_hg19_v1_chr16_+_30907950 BC049822 BC036787	2353	+	TSC_hg19_v1_chr16_-_30934469 BC101464 BC101988 BC105687 BC105926 AK092263 AX747439	28924	-	AK302669 NM_001099784	30306	+	BC058863|BCL7C|9274|B-cell CLL/lymphoma 7C##BC019071|BCL7C|9274|B-cell CLL/lymphoma 7C##NM_004765|BCL7C|9274|B-cell CLL/lymphoma 7C##AJ223980|BCL7C|9274|B-cell CLL/lymphoma 7C##BC064416|CTF1|1489|cardiotrophin 1##NM_001142544|CTF1|1489|cardiotrophin 1##NM_001330|CTF1|1489|cardiotrophin 1##U43030|CTF1|1489|cardiotrophin 1##BC049822|CTF1|1489|cardiotrophin 1##BC036787|CTF1|1489|cardiotrophin 1##BC101464|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC101988|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC105687|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC105926|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##AK092263|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##AK302669|FBXL19|54620|F-box and leucine-rich repeat protein 19##NM_001099784|FBXL19|54620|F-box and leucine-rich repeat protein 19	0.315826	CTCF.p2:-17:0.316
chr9	27333443	27333543	reg1005066.p2	5.173	+	BC137351 BC137352 BC144602 BC014307 AJ278482 NM_001161585 NM_020641	-36372	-	AK294887 NM_000459	-224351	+	BC126156 BC136298 AK222987 AK024955 BC056252 NM_022901	-327824	-	AF146759 AF315688 NM_020124 AY358855 AB463795	190829	+	TSC_hg19_v1_chr9_-_27529809 AL832572 BC033027 AK023266 NM_024761	196157	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	239978	-	BC137351|C9orf11|54586|chromosome 9 open reading frame 11##BC137352|C9orf11|54586|chromosome 9 open reading frame 11##BC144602|C9orf11|54586|chromosome 9 open reading frame 11##BC014307|C9orf11|54586|chromosome 9 open reading frame 11##AJ278482|C9orf11|54586|chromosome 9 open reading frame 11##NM_001161585|C9orf11|54586|chromosome 9 open reading frame 11##NM_020641|C9orf11|54586|chromosome 9 open reading frame 11##AK294887|TEK|7010|TEK tyrosine kinase, endothelial##NM_000459|TEK|7010|TEK tyrosine kinase, endothelial##BC126156|LRRC19|64922|leucine rich repeat containing 19##BC136298|LRRC19|64922|leucine rich repeat containing 19##AK222987|LRRC19|64922|leucine rich repeat containing 19##AK024955|LRRC19|64922|leucine rich repeat containing 19##BC056252|LRRC19|64922|leucine rich repeat containing 19##NM_022901|LRRC19|64922|leucine rich repeat containing 19##AF146759|IFNK|56832|interferon, kappa##AF315688|IFNK|56832|interferon, kappa##NM_020124|IFNK|56832|interferon, kappa##AY358855|IFNK|56832|interferon, kappa##AL832572|MOB3B|79817|MOB kinase activator 3B##BC033027|MOB3B|79817|MOB kinase activator 3B##AK023266|MOB3B|79817|MOB kinase activator 3B##NM_024761|MOB3B|79817|MOB kinase activator 3B##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72	0.0	
chr10	63798705	63798885	reg1003366.p2	5.172	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-137364	+	NM_032199	-137783	+	BC041932 NM_173554	-376077	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	10301	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	229744	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	335248	+	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365	0.0	
chr15	41624286	41624442	reg1025529.p1	5.172	+	TSC_hg19_v1_chr15_+_41576202 BC037835 BX647764 AK172729 AY007106	-48174	+	TSC_hg19_v1_chr15_+_41523465 AK307060 AK312582 BC051815 BC031293 CR536539 CR542085	-100842	+	TSC_hg19_v1_chr15_+_41523431 AK299660 NM_007236	-100946	+	TSC_hg19_v1_chr15_-_41624771 AF025441 BC015050 NM_007280	425	-	NM_001243142 NM_001243143 NM_001243144 NM_016359 NM_018454	527	+	AK307728 AK222819 AK290879 AK293168 BC011008 AF217513 TSC_hg19_v1_chr15_+_41625080 AK225703 AL833611 AK023483 BC024772 AF090915 AF290612 BC001308 BC012887	717	+	BC037835|OIP5-AS1|729082|OIP5 antisense RNA 1 (non-protein coding)##BX647764|OIP5-AS1|729082|OIP5 antisense RNA 1 (non-protein coding)##AK172729|OIP5-AS1|729082|OIP5 antisense RNA 1 (non-protein coding)##AY007106|OIP5-AS1|729082|OIP5 antisense RNA 1 (non-protein coding)##AK307060|CHP|11261|calcium binding protein P22##AK312582|CHP|11261|calcium binding protein P22##BC031293|CHP|11261|calcium binding protein P22##CR536539|CHP|11261|calcium binding protein P22##CR542085|CHP|11261|calcium binding protein P22##AK299660|CHP|11261|calcium binding protein P22##NM_007236|CHP|11261|calcium binding protein P22##AF025441|OIP5|11339|Opa interacting protein 5##BC015050|OIP5|11339|Opa interacting protein 5##NM_007280|OIP5|11339|Opa interacting protein 5##NM_001243142|NUSAP1|51203|nucleolar and spindle associated protein 1##NM_001243143|NUSAP1|51203|nucleolar and spindle associated protein 1##NM_001243144|NUSAP1|51203|nucleolar and spindle associated protein 1##NM_016359|NUSAP1|51203|nucleolar and spindle associated protein 1##NM_018454|NUSAP1|51203|nucleolar and spindle associated protein 1##AK307728|NUSAP1|51203|nucleolar and spindle associated protein 1##AK222819|NUSAP1|51203|nucleolar and spindle associated protein 1##AK290879|NUSAP1|51203|nucleolar and spindle associated protein 1##AK293168|NUSAP1|51203|nucleolar and spindle associated protein 1##BC011008|NUSAP1|51203|nucleolar and spindle associated protein 1##AF217513|NUSAP1|51203|nucleolar and spindle associated protein 1##AK225703|NUSAP1|51203|nucleolar and spindle associated protein 1##AL833611|NUSAP1|51203|nucleolar and spindle associated protein 1##AK023483|NUSAP1|51203|nucleolar and spindle associated protein 1##BC024772|NUSAP1|51203|nucleolar and spindle associated protein 1##AF090915|NUSAP1|51203|nucleolar and spindle associated protein 1##AF290612|NUSAP1|51203|nucleolar and spindle associated protein 1##BC001308|NUSAP1|51203|nucleolar and spindle associated protein 1##BC012887|NUSAP1|51203|nucleolar and spindle associated protein 1	0.883514	CTCF.p2:6:0.884
chr3	122017197	122017333	reg1028296.p1	5.172	+	NM_001178065 U20760	-114085	+	NM_000388 U20759	-114736	+	NM_006889 NM_176892 U04343	-220543	+	NM_005213 AK291308 BC010379 X05978 CR456914	26809	+	BC019231 BC109378 TSC_hg19_v1_chr3_-_122102079 BC054051 BC062725 NM_001017928	84812	-	NM_014367 AK026030 BC010896 BC015060 AF201944 AF107495 AF250321 TSC_hg19_v1_chr3_+_122103076 AK293994 AF191020	85803	+	NM_001178065|CASR|846|calcium-sensing receptor##U20760|CASR|846|calcium-sensing receptor##NM_000388|CASR|846|calcium-sensing receptor##U20759|CASR|846|calcium-sensing receptor##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule##NM_005213|CSTA|1475|cystatin A (stefin A)##AK291308|CSTA|1475|cystatin A (stefin A)##BC010379|CSTA|1475|cystatin A (stefin A)##X05978|CSTA|1475|cystatin A (stefin A)##CR456914|CSTA|1475|cystatin A (stefin A)##BC109378|CCDC58|131076|coiled-coil domain containing 58##BC054051|CCDC58|131076|coiled-coil domain containing 58##BC062725|CCDC58|131076|coiled-coil domain containing 58##NM_001017928|CCDC58|131076|coiled-coil domain containing 58##NM_014367|FAM162A|26355|family with sequence similarity 162, member A##AK026030|FAM162A|26355|family with sequence similarity 162, member A##BC010896|FAM162A|26355|family with sequence similarity 162, member A##BC015060|FAM162A|26355|family with sequence similarity 162, member A##AF201944|FAM162A|26355|family with sequence similarity 162, member A##AF107495|FAM162A|26355|family with sequence similarity 162, member A##AF250321|FAM162A|26355|family with sequence similarity 162, member A##AK293994|FAM162A|26355|family with sequence similarity 162, member A##AF191020|FAM162A|26355|family with sequence similarity 162, member A	0.0	
chr4	21514119	21514257	reg1028558.p2	5.172	+	AY118170 DQ148489 NM_147183 AK290998	-208619	-	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	-528559	-	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	-812121	+	DQ148491 NM_001035004	32090	-	BX648990 DQ148490 NM_001035003	185129	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	436196	-	AY118170|KCNIP4|80333|Kv channel interacting protein 4##DQ148489|KCNIP4|80333|Kv channel interacting protein 4##NM_147183|KCNIP4|80333|Kv channel interacting protein 4##AK290998|KCNIP4|80333|Kv channel interacting protein 4##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148491|KCNIP4|80333|Kv channel interacting protein 4##NM_001035004|KCNIP4|80333|Kv channel interacting protein 4##BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##NM_147182|KCNIP4|80333|Kv channel interacting protein 4	0.015893	
chr8	10405813	10405950	reg1006134.p2	5.172	+	BC033497 NM_001197020 NM_198464 AY358867	-22814	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	-452818	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	-494002	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	106759	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	124278	+	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	182103	-	BC033497|PRSS55|203074|protease, serine, 55##NM_001197020|PRSS55|203074|protease, serine, 55##NM_198464|PRSS55|203074|protease, serine, 55##AY358867|PRSS55|203074|protease, serine, 55##AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7	0.011357	
chr9	130795478	130795646	reg1027149.p1	5.172	+	TSC_hg19_v1_chr9_-_130742813 AK058004 NM_001035254	-52753	-	BC137087 BC137088 BC047949 NM_203305 BC142952	-82631	-	BC015233 NM_003863	-94800	-	AK122729 NM_197956	34036	-	TSC_hg19_v1_chr9_+_130830492 AK290991 NM_001006641	34921	+	AJ619990 TSC_hg19_v1_chr9_+_130830643	35057	+	AK058004|FAM102A|399665|family with sequence similarity 102, member A##NM_001035254|FAM102A|399665|family with sequence similarity 102, member A##BC137087|FAM102A|399665|family with sequence similarity 102, member A##BC137088|FAM102A|399665|family with sequence similarity 102, member A##BC047949|FAM102A|399665|family with sequence similarity 102, member A##NM_203305|FAM102A|399665|family with sequence similarity 102, member A##BC142952|FAM102A|399665|family with sequence similarity 102, member A##BC015233|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##NM_003863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1##AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	0.0	
chr9	71189178	71189320	reg1028187.p2	5.172	+	DQ890797 DQ893952 BC029780 NM_153237 TSC_hg19_v1_chr9_-_71155800	-33484	-	BC033073 NM_021965	-217435	+	AY344641 AY344642 NM_199135 BC137365 BC137366 EU446685 BC103887	-271425	+	TSC_hg19_v1_chr9_+_71320206 AK295587 AK292734 NM_003558	131127	+	TSC_hg19_v1_chr9_+_71394980 NM_138333 BC013062 AK126379 AK304099	205702	+	CU680482 TSC_hg19_v1_chr9_+_71395147	205867	+	DQ890797|C9orf71|169693|chromosome 9 open reading frame 71##DQ893952|C9orf71|169693|chromosome 9 open reading frame 71##BC029780|C9orf71|169693|chromosome 9 open reading frame 71##NM_153237|C9orf71|169693|chromosome 9 open reading frame 71##BC033073|PGM5|5239|phosphoglucomutase 5##NM_021965|PGM5|5239|phosphoglucomutase 5##AY344641|FOXD4L3|286380|forkhead box D4-like 3##AY344642|FOXD4L3|286380|forkhead box D4-like 3##NM_199135|FOXD4L3|286380|forkhead box D4-like 3##BC137365|FOXD4L6|653404|forkhead box D4-like 6##BC137366|FOXD4L6|653404|forkhead box D4-like 6##EU446685|FOXD4L6|653404|forkhead box D4-like 6##BC103887|FOXD4L6|653404|forkhead box D4-like 6##AK295587|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##AK292734|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_003558|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_138333|FAM122A|116224|family with sequence similarity 122A##BC013062|FAM122A|116224|family with sequence similarity 122A##AK126379|FAM122A|116224|family with sequence similarity 122A	0.28888	CTCF.p2:11:0.289
chr18	41151198	41151317	reg1023853.p1	5.171	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-293828	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-455688	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-1616024	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	1108857	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	1109611	+	NM_001242692 AK292422	1641695	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.965801	CTCF.p2:-20:0.966
chr19	17733209	17733355	reg1028413.p1	5.171	+	TSC_hg19_v1_chr19_+_17666507 AK075541 NM_024656	-66771	+	TSC_hg19_v1_chr19_+_17666457 BC108308	-66819	+	TSC_hg19_v1_chr19_+_17666429 AK074941	-66874	+	AB028955 NM_001080421 AB587313 TSC_hg19_v1_chr19_-_17799158	65816	-	TSC_hg19_v1_chr19_+_17830288 AK292555	97008	+	DQ387861 NM_018174 AL834233 BC067115 TSC_hg19_v1_chr19_+_17830310 BC080547 AJ440784 AK027623 BC113952 AK308975	97027	+	AK075541|GLT25D1|79709|glycosyltransferase 25 domain containing 1##NM_024656|GLT25D1|79709|glycosyltransferase 25 domain containing 1##BC108308|GLT25D1|79709|glycosyltransferase 25 domain containing 1##AK074941|GLT25D1|79709|glycosyltransferase 25 domain containing 1##AB028955|UNC13A|23025|unc-13 homolog A (C. elegans)##NM_001080421|UNC13A|23025|unc-13 homolog A (C. elegans)##AK292555|MAP1S|55201|microtubule-associated protein 1S##DQ387861|MAP1S|55201|microtubule-associated protein 1S##NM_018174|MAP1S|55201|microtubule-associated protein 1S##AL834233|MAP1S|55201|microtubule-associated protein 1S##BC067115|MAP1S|55201|microtubule-associated protein 1S##BC080547|MAP1S|55201|microtubule-associated protein 1S##AJ440784|MAP1S|55201|microtubule-associated protein 1S##AK027623|MAP1S|55201|microtubule-associated protein 1S##BC113952|MAP1S|55201|microtubule-associated protein 1S##AK308975|MAP1S|55201|microtubule-associated protein 1S	0.977952	CTCF.p2:26:0.978
chr2	65058567	65058747	reg1008510.p1	5.171	+	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-177610	-	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-177808	-	TSC_hg19_v1_chr2_+_64751580 AL833962	-307055	+	TSC_hg19_v1_chr2_-_65090764 AK097952	32084	-	TSC_hg19_v1_chr2_-_65159574 BC037562	100920	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	156943	+	D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##AL833962|AFTPH|54812|aftiphilin##BC037562|LOC400958|400958|uncharacterized LOC400958##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.0	
chr7	128070368	128070481	reg1021819.p1	5.171	+	TSC_hg19_v1_chr7_-_128050037 AK092452 BC033622 AK054667 AK122994 NM_000883 NM_001102605 NM_001142576 NM_183243	-20387	-	AK131294 TSC_hg19_v1_chr7_-_128049984 CR933672	-20444	-	AK054640 AK293413 AK297943 TSC_hg19_v1_chr7_-_128046013 NM_001142573 NM_001142574 NM_001142575	-24407	-	TSC_hg19_v1_chr7_+_128095931 NM_001098786 NM_013332 AF144755 AK024729 AK222583 BC008573 BC001863 BC093742 BC112183	25542	+	NM_018396 TSC_hg19_v1_chr7_+_128116813 AK302775 BC107586 AK002212 BC064929 BC121115 BC121116 AK299960	46413	+	BC066973 NM_001012454 NM_001128926 BC105729 BC105730 BC105731 BC047310	241922	+	AK092452|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC033622|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054667|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK122994|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_000883|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001102605|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142576|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_183243|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK131294|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##CR933672|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated##AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_018396|METTL2B|55798|methyltransferase like 2B##AK302775|METTL2B|55798|methyltransferase like 2B##BC107586|METTL2B|55798|methyltransferase like 2B##AK002212|METTL2B|55798|methyltransferase like 2B##BC064929|METTL2B|55798|methyltransferase like 2B##BC121115|METTL2B|55798|methyltransferase like 2B##BC121116|METTL2B|55798|methyltransferase like 2B##AK299960|METTL2B|55798|methyltransferase like 2B##BC066973|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001012454|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001128926|FAM71F2|346653|family with sequence similarity 71, member F2##BC105729|FAM71F2|346653|family with sequence similarity 71, member F2##BC105730|FAM71F2|346653|family with sequence similarity 71, member F2##BC105731|FAM71F2|346653|family with sequence similarity 71, member F2##BC047310|FAM71F2|346653|family with sequence similarity 71, member F2	0.049677	
chr1	110230283	110230412	reg1025184.p1	5.170	+	NM_000848 NM_001142368 BC017836 BC110380 TSC_hg19_v1_chr1_+_110210704 AK309796 BC105038 BC105066 M63509	-19664	+	M99421 TSC_hg19_v1_chr1_+_110198960 AB590400 DQ890658 DQ890659 DQ893839 BT019947 CR541869 CU677329	-31404	+	TSC_hg19_v1_chr1_+_110198727 DQ062813 AK311000 BC015513 M99422 M96234 BC108729	-31595	+	NM_000561 NM_146421 TSC_hg19_v1_chr1_+_110230438 BC024005 BC095463 X08020 BC036805 J03817 GQ129273 GQ129274 AB590610 CU692840 AY510272 AY532926 AY532927 CR541868	109	+	NM_000851 L02321 AK127250 BC058881 AK289673 AK315260 CU691316	24551	+	BT019945 CR542108 AB527634 DQ891834 EU176637 BC000088 EF363096 J05459 AB209816 AK313444 TSC_hg19_v1_chr1_-_110282939 AK304300	52581	-	NM_000848|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##NM_001142368|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##BC017836|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##BC110380|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##AK309796|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##BC105038|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##BC105066|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##M63509|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##M99421|GSTM4|2948|glutathione S-transferase mu 4##DQ890658|GSTM4|2948|glutathione S-transferase mu 4##DQ890659|GSTM4|2948|glutathione S-transferase mu 4##DQ893839|GSTM4|2948|glutathione S-transferase mu 4##BT019947|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##CR541869|GSTM4|2948|glutathione S-transferase mu 4##DQ062813|GSTM4|2948|glutathione S-transferase mu 4##BC015513|GSTM4|2948|glutathione S-transferase mu 4##M99422|GSTM4|2948|glutathione S-transferase mu 4##M96234|GSTM4|2948|glutathione S-transferase mu 4##BC108729|GSTM4|2948|glutathione S-transferase mu 4##NM_000561|GSTM1|2944|glutathione S-transferase mu 1##NM_146421|GSTM1|2944|glutathione S-transferase mu 1##BC024005|GSTM1|2944|glutathione S-transferase mu 1##BC095463|GSTM1|2944|glutathione S-transferase mu 1##X08020|GSTM1|2944|glutathione S-transferase mu 1##BC036805|GSTM1|2944|glutathione S-transferase mu 1##J03817|GSTM1|2944|glutathione S-transferase mu 1##GQ129273|GSTM1|2944|glutathione S-transferase mu 1##GQ129274|GSTM1|2944|glutathione S-transferase mu 1##AY510272|GSTM1|2944|glutathione S-transferase mu 1##AY532926|GSTM1|2944|glutathione S-transferase mu 1##AY532927|GSTM1|2944|glutathione S-transferase mu 1##CR541868|GSTM1|2944|glutathione S-transferase mu 1##NM_000851|GSTM5|2949|glutathione S-transferase mu 5##L02321|GSTM5|2949|glutathione S-transferase mu 5##AK127250|GSTM5|2949|glutathione S-transferase mu 5##BC058881|GSTM5|2949|glutathione S-transferase mu 5##AK289673|GSTM5|2949|glutathione S-transferase mu 5##AK315260|GSTM5|2949|glutathione S-transferase mu 5##BT019945|GSTM3|2947|glutathione S-transferase mu 3 (brain)##CR542108|GSTM3|2947|glutathione S-transferase mu 3 (brain)##DQ891834|GSTM3|2947|glutathione S-transferase mu 3 (brain)##EU176637|GSTM3|2947|glutathione S-transferase mu 3 (brain)##BC000088|GSTM3|2947|glutathione S-transferase mu 3 (brain)##EF363096|GSTM3|2947|glutathione S-transferase mu 3 (brain)##J05459|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AB209816|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AK313444|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AK304300|GSTM3|2947|glutathione S-transferase mu 3 (brain)	0.059426	
chr11	120111114	120111242	reg1023541.p1	5.170	+	AK291993 NM_014352 AF162278 BC101649 BC143593 BC143594 BC143595 AF133895 AJ012214 EU446698	-201	+	AK302212 NM_001244682	-3830	+	TSC_hg19_v1_chr11_+_120081739 BC047726 NM_178507 BC008339	-29465	+	AK128040 NM_001198670 NM_001198671 NM_001198672 NM_001198673 NM_001198674 NM_001198675 NM_174926	84659	+	AK096207 AK304086 TSC_hg19_v1_chr11_+_120196007 AK289680 AK294713 BC015232	84840	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	95926	+	AK291993|POU2F3|25833|POU class 2 homeobox 3##NM_014352|POU2F3|25833|POU class 2 homeobox 3##AF162278|POU2F3|25833|POU class 2 homeobox 3##BC101649|POU2F3|25833|POU class 2 homeobox 3##BC143593|POU2F3|25833|POU class 2 homeobox 3##BC143594|POU2F3|25833|POU class 2 homeobox 3##BC143595|POU2F3|25833|POU class 2 homeobox 3##AF133895|POU2F3|25833|POU class 2 homeobox 3##AJ012214|POU2F3|25833|POU class 2 homeobox 3##EU446698|POU2F3|25833|POU class 2 homeobox 3##AK302212|POU2F3|25833|POU class 2 homeobox 3##NM_001244682|POU2F3|25833|POU class 2 homeobox 3##BC047726|OAF|220323|OAF homolog (Drosophila)##NM_178507|OAF|220323|OAF homolog (Drosophila)##BC008339|OAF|220323|OAF homolog (Drosophila)##AK128040|TMEM136|219902|transmembrane protein 136##NM_001198670|TMEM136|219902|transmembrane protein 136##NM_001198671|TMEM136|219902|transmembrane protein 136##NM_001198672|TMEM136|219902|transmembrane protein 136##NM_001198673|TMEM136|219902|transmembrane protein 136##NM_001198674|TMEM136|219902|transmembrane protein 136##NM_001198675|TMEM136|219902|transmembrane protein 136##NM_174926|TMEM136|219902|transmembrane protein 136##AK096207|TMEM136|219902|transmembrane protein 136##AK304086|TMEM136|219902|transmembrane protein 136##AK289680|TMEM136|219902|transmembrane protein 136##AK294713|TMEM136|219902|transmembrane protein 136##BC015232|TMEM136|219902|transmembrane protein 136##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12	0.994779	CTCF.p2:13:0.995
chr13	71894723	71894865	reg1033646.p1	5.170	+	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	-1212253	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-4090290	-	AK289924 NM_022843	-9905140	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	545465	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	545969	-	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	546640	-	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)	0.950615	CTCF.p2:-10:0.951
chr15	85364768	85364893	reg1028299.p1	5.170	+	AY044449 NM_020778	-4920	+	TSC_hg19_v1_chr15_+_85291875 BC094688	-72968	+	TSC_hg19_v1_chr15_+_85291820 NM_014630	-73005	+	AK291997 AK296075 AK298369 AK296074 AK296119 AK309571 AK311387 AK309578 AF309632 NM_004213 NM_201651 BC029788	63081	+	TSC_hg19_v1_chr15_+_85523735 BC060762 AK074280 NM_001243137	158872	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	160407	+	AY044449|ALPK3|57538|alpha-kinase 3##NM_020778|ALPK3|57538|alpha-kinase 3##BC094688|ZNF592|9640|zinc finger protein 592##NM_014630|ZNF592|9640|zinc finger protein 592##AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC060762|PDE8A|5151|phosphodiesterase 8A##AK074280|PDE8A|5151|phosphodiesterase 8A##NM_001243137|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A	0.086988	
chr16	75584254	75584378	reg1027934.p1	5.170	+	AF246718 NM_024533	-15249	-	TSC_hg19_v1_chr16_-_75529303 AK311527 AK093904	-55019	-	TSC_hg19_v1_chr16_-_75529279 AF219990	-55037	-	CU679755 TSC_hg19_v1_chr16_-_75590137 AK096650 NM_001077416 BC010609 AK307263 AK025820 BC063677 AY358612 AK290483 NM_001077418 NM_001077419	5850	-	AB030710 NM_007285 TSC_hg19_v1_chr16_+_75600274 BC029601	15945	+	AK289788 TSC_hg19_v1_chr16_+_75600276 AF087848 AK311266 AF077046 AJ010569 BC014594 BC005985 AB463663 AM393324 DQ893101 DQ896373 CR542217	16014	+	AF246718|CHST5|23563|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5##NM_024533|CHST5|23563|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5##AK096650|TMEM231|79583|transmembrane protein 231##NM_001077416|TMEM231|79583|transmembrane protein 231##BC010609|TMEM231|79583|transmembrane protein 231##AK307263|TMEM231|79583|transmembrane protein 231##AK025820|TMEM231|79583|transmembrane protein 231##BC063677|TMEM231|79583|transmembrane protein 231##AY358612|TMEM231|79583|transmembrane protein 231##AK290483|TMEM231|79583|transmembrane protein 231##NM_001077418|TMEM231|79583|transmembrane protein 231##NM_001077419|TMEM231|79583|transmembrane protein 231##AB030710|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##NM_007285|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC029601|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AK289788|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AF087848|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AK311266|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AF077046|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AJ010569|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC014594|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC005985|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AM393324|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##DQ893101|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##DQ896373|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##CR542217|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2	0.28681	CTCF.p2:10:0.287
chr19	11489078	11489176	reg1025328.p1	5.170	+	BC068071 AK092438 AX747546 NM_175871 BC119677	-3754	+	AK094869 TSC_hg19_v1_chr19_+_11466173 BC009378	-22932	+	NM_001170635 NM_022737 TSC_hg19_v1_chr19_+_11466107 AK023117 AY304516 AK225482	-23012	+	M34986 AB527807 BC112153 BC143697 BC143698 BC143700 AK315097 M60459 BC019092 NM_000121	5822	-	AK074082 TSC_hg19_v1_chr19_-_11529991 BC064475 AK057147 AK293404 AK298281 BC101756 BC111958 BC143530 BC014426 NM_001035223 NM_001161616	40861	-	AK056363 BC141828 BC142637 AK294355 AK308072 NM_145045 BC036041 BC050355	56822	-	BC068071|SWSAP1|126074|SWIM-type zinc finger 7 associated protein 1##AK092438|SWSAP1|126074|SWIM-type zinc finger 7 associated protein 1##NM_175871|SWSAP1|126074|SWIM-type zinc finger 7 associated protein 1##BC119677|SWSAP1|126074|SWIM-type zinc finger 7 associated protein 1##AK094869|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##BC009378|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##NM_001170635|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##NM_022737|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##AK023117|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##AY304516|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##AK225482|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##M34986|EPOR|2057|erythropoietin receptor##BC112153|EPOR|2057|erythropoietin receptor##BC143697|EPOR|2057|erythropoietin receptor##BC143698|EPOR|2057|erythropoietin receptor##BC143700|EPOR|2057|erythropoietin receptor##AK315097|EPOR|2057|erythropoietin receptor##M60459|EPOR|2057|erythropoietin receptor##BC019092|EPOR|2057|erythropoietin receptor##NM_000121|EPOR|2057|erythropoietin receptor##BC064475|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK057147|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK293404|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK298281|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC101756|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC111958|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC143530|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC014426|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##NM_001035223|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##NM_001161616|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK056363|CCDC151|115948|coiled-coil domain containing 151##BC141828|CCDC151|115948|coiled-coil domain containing 151##BC142637|CCDC151|115948|coiled-coil domain containing 151##AK294355|CCDC151|115948|coiled-coil domain containing 151##AK308072|CCDC151|115948|coiled-coil domain containing 151##NM_145045|CCDC151|115948|coiled-coil domain containing 151##BC036041|CCDC151|115948|coiled-coil domain containing 151##BC050355|CCDC151|115948|coiled-coil domain containing 151	0.591661	CTCF.p2:-2:0.592
chr19	56215204	56215306	reg1026990.p1	5.170	+	AF073727 NM_001130071	-27265	+	BC044651 TSC_hg19_v1_chr19_+_56186632	-28582	+	TSC_hg19_v1_chr19_+_56186593 AK022454 AK314690	-28662	+	AY154464 BC136583 NM_176820	34498	-	NM_001145014	55251	+	AK315003 NM_134444	132688	+	AF073727|EPN1|29924|epsin 1##NM_001130071|EPN1|29924|epsin 1##BC044651|EPN1|29924|epsin 1##AK022454|EPN1|29924|epsin 1##AK314690|EPN1|29924|epsin 1##AY154464|NLRP9|338321|NLR family, pyrin domain containing 9##BC136583|NLRP9|338321|NLR family, pyrin domain containing 9##NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9##NM_001145014|RFPL4A|342931|ret finger protein-like 4A##AK315003|NLRP4|147945|NLR family, pyrin domain containing 4##NM_134444|NLRP4|147945|NLR family, pyrin domain containing 4	0.996581	CTCF.p2:6:0.997
chr5	169146479	169146659	reg1027857.p1	5.170	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-82269	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-82325	+	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	-135848	+	AK055998 NM_001129891	261174	-	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	386402	+	BC030767 NM_001102609 BC092511	513427	+	D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58	0.0	
chr6	5724258	5724439	reg1030083.p1	5.170	+	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-462658	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-463086	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-463182	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	282793	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	283349	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	596537	-	NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide	0.0	
chr7	143336593	143336701	reg1028198.p1	5.170	+	BC113530 BC117233 NM_173678 AY167570 BC010225	-18105	+	BC041464 AK315909 NM_001130025 AK098041 AK297123 AL832734 BC033189	-18585	+	BC043153 BC110410 NM_001008747 BC146818 BC150314	-67756	+	NM_001130026 AK296318	76303	+	BC110410 BC043153 NM_178561	118159	-	AK299911 TSC_hg19_v1_chr7_-_143582416 NM_001206941	245767	-	BC113530|FAM115C|285966|family with sequence similarity 115, member C##BC117233|FAM115C|285966|family with sequence similarity 115, member C##NM_173678|FAM115C|285966|family with sequence similarity 115, member C##AY167570|FAM115C|285966|family with sequence similarity 115, member C##BC010225|LOC154761|154761|uncharacterized LOC154761##BC041464|LOC154761|154761|uncharacterized LOC154761##NM_001130025|FAM115C|285966|family with sequence similarity 115, member C##AK098041|FAM115C|285966|family with sequence similarity 115, member C##AK297123|LOC154761|154761|uncharacterized LOC154761##AL832734|FAM115C|285966|family with sequence similarity 115, member C##BC033189|LOC154761|154761|uncharacterized LOC154761##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_001008747|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC146818|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC150314|CTAGE15P|441294|CTAGE family, member 15, pseudogene##NM_001130026|FAM115C|285966|family with sequence similarity 115, member C##AK296318|FAM115C|285966|family with sequence similarity 115, member C##BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_178561|CTAGE6P|340307|CTAGE family, member 6, pseudogene##AK299911|FAM115A|9747|family with sequence similarity 115, member A##NM_001206941|FAM115A|9747|family with sequence similarity 115, member A	0.991667	CTCF.p2:0:0.992
chr10	8173502	8173682	reg1026278.p2	5.169	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-76109	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-76817	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-76943	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	2873665	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	2873693	+	AK299548 TSC_hg19_v1_chr10_+_11047339	2873748	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.0	
chr6	3457418	3457527	reg1025420.p1	5.169	+	BC040876 NM_015482	-709	-	TSC_hg19_v1_chr6_-_3456513 AL110245	-958	-	BC128580 BC128581 BC038748 NM_021945	-12265	-	TSC_hg19_v1_chr6_-_3720312 BC031944	262838	-	NM_183373 TSC_hg19_v1_chr6_-_3752248	294774	-	BC001261 NM_012135 Y18503	392154	+	BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##BC128580|SLC22A23|63027|solute carrier family 22, member 23##BC128581|SLC22A23|63027|solute carrier family 22, member 23##BC038748|SLC22A23|63027|solute carrier family 22, member 23##NM_021945|SLC22A23|63027|solute carrier family 22, member 23##NM_183373|PXDC1|221749|PX domain containing 1##BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B	0.049858	
chr8	56794111	56794272	reg1026872.p2	5.169	+	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-1671	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	-1796	+	TSC_hg19_v1_chr8_+_56792383 M16038 NM_001111097 NM_002350 BC126456 BC126458	-1826	+	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	192895	-	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	232349	-	TSC_hg19_v1_chr8_-_57123833 U65002	329644	-	AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M16038|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_001111097|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_002350|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126456|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126458|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1	0.0	
chr12	75899612	75899746	reg1021770.p1	5.168	+	NM_006851 TSC_hg19_v1_chr12_+_75874534 AK304847 X91911 BC005227 U16307 BC012510 AF400440 AK313449 CU680346 AB529136 EF667354	-25093	+	TSC_hg19_v1_chr12_+_75784878 BX640916 BC029557 NM_152436 DQ891533 DQ894722	-114794	+	BC016749 AK093175 AX747973 TSC_hg19_v1_chr12_+_75784869	-114820	+	CU689792 DQ893552 DQ893553 DQ893554 DQ896515 EF010919 TSC_hg19_v1_chr12_-_75905381 AK297602 AK313687	5699	-	AK022133 TSC_hg19_v1_chr12_-_75905382 BC016778 U55766	5706	-	BC033887 TSC_hg19_v1_chr12_-_75905393 BC014034 BC026107	5716	-	NM_006851|GLIPR1|11010|GLI pathogenesis-related 1##AK304847|GLIPR1|11010|GLI pathogenesis-related 1##X91911|GLIPR1|11010|GLI pathogenesis-related 1##BC005227|GLIPR1|11010|GLI pathogenesis-related 1##U16307|GLIPR1|11010|GLI pathogenesis-related 1##BC012510|GLIPR1|11010|GLI pathogenesis-related 1##AF400440|GLIPR1|11010|GLI pathogenesis-related 1##AK313449|GLIPR1|11010|GLI pathogenesis-related 1##EF667354|GLIPR1|11010|GLI pathogenesis-related 1##BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ893552|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ893553|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ893554|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ896515|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##EF010919|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK297602|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK313687|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK022133|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC016778|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##U55766|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC033887|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC014034|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC026107|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)	0.829504	CTCF.p2:32:0.830
chr15	38056970	38057114	reg1026639.p1	5.168	+	TSC_hg19_v1_chr15_-_37393466 BC050431 NM_001220482 NM_002399 BC001516 BC001844 BC007202 AK300247	-663600	-	TSC_hg19_v1_chr15_-_37392751 AK056216 NM_170674 NM_170675 NM_170676 NM_170677	-664486	-	TSC_hg19_v1_chr15_-_37392322 AK226072	-664711	-	BC029221 NM_152453	170414	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	487353	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	487980	+	BC050431|MEIS2|4212|Meis homeobox 2##NM_001220482|MEIS2|4212|Meis homeobox 2##NM_002399|MEIS2|4212|Meis homeobox 2##BC001516|MEIS2|4212|Meis homeobox 2##BC001844|MEIS2|4212|Meis homeobox 2##BC007202|MEIS2|4212|Meis homeobox 2##AK300247|MEIS2|4212|Meis homeobox 2##AK056216|MEIS2|4212|Meis homeobox 2##NM_170674|MEIS2|4212|Meis homeobox 2##NM_170675|MEIS2|4212|Meis homeobox 2##NM_170676|MEIS2|4212|Meis homeobox 2##NM_170677|MEIS2|4212|Meis homeobox 2##AK226072|MEIS2|4212|Meis homeobox 2##BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1	0.99962	CTCF.p2:12:1.000
chr3	87194824	87194918	reg1027590.p1	5.168	+	BC094780 TSC_hg19_v1_chr3_-_87040272	-154601	-	TSC_hg19_v1_chr3_-_87040249 NM_016206	-154620	-	AF538973 NM_153184	-1419240	+	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	81664	+	AB587506 L18781 X72215 X62429 D10216 NM_000306 NM_001122757	130802	-	NM_000866	836854	+	BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B##L18781|POU1F1|5449|POU class 1 homeobox 1##X72215|POU1F1|5449|POU class 1 homeobox 1##X62429|POU1F1|5449|POU class 1 homeobox 1##D10216|POU1F1|5449|POU class 1 homeobox 1##NM_000306|POU1F1|5449|POU class 1 homeobox 1##NM_001122757|POU1F1|5449|POU class 1 homeobox 1##NM_000866|HTR1F|3355|5-hydroxytryptamine (serotonin) receptor 1F	0.947008	CTCF.p2:4:0.829
chr4	83139601	83139744	reg1027498.p2	5.168	+	TSC_hg19_v1_chr4_-_82393062 AK291459 BC036784 AK303625 AK056257 NM_152545	-746612	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	-746689	-	AB528214 D70899 NM_006259 X94612	-1013465	-	D55671 TSC_hg19_v1_chr4_-_83294725	155003	-	AF039575 X03910 AB463729 DQ892240 DQ895440 BC002401 TSC_hg19_v1_chr4_-_83294907	155200	-	TSC_hg19_v1_chr4_-_83295122 D55674 AK057836 D55672 BC023977 BC026015	155408	-	AK291459|RASGEF1B|153020|RasGEF domain family, member 1B##BC036784|RASGEF1B|153020|RasGEF domain family, member 1B##AK303625|RASGEF1B|153020|RasGEF domain family, member 1B##AK056257|RASGEF1B|153020|RasGEF domain family, member 1B##NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##D55671|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##AF039575|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##X03910|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##DQ892240|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##DQ895440|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##BC002401|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##D55674|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##AK057836|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##D55672|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##BC023977|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)##BC026015|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	0.976316	CTCF.p2:-2:0.976
chr5	71748077	71748252	reg1028826.p1	5.168	+	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-131942	+	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	-131962	+	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	-132084	-	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	55019	-	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	364326	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	395777	+	BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1	0.0	
chr6_mcf_hap5	860570	860636	reg1022625.p1	5.168	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.57731	CTCF.p2:7:0.577
chr10	93505081	93505208	reg1026717.p2	5.167	+	BX537399 NM_005398 TSC_hg19_v1_chr10_-_93392859	-112286	-	AF087874 Y18207 TSC_hg19_v1_chr10_-_93392829 AK299398 AK313149	-112330	-	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	-112383	-	AF438201 TSC_hg19_v1_chr10_+_93558136	52959	+	TSC_hg19_v1_chr10_+_93558164 AF305081 NM_025235	53008	+	AK314612 TSC_hg19_v1_chr10_+_93558182 AF309033	53045	+	BX537399|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##NM_005398|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AF087874|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##Y18207|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK299398|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK313149|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AF438201|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF305081|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##NM_025235|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AK314612|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF309033|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	0.010908	
chr11	64418516	64418653	reg1028713.p1	5.167	+	TSC_hg19_v1_chr11_-_64410785 NM_138734	-7793	-	BC043422 TSC_hg19_v1_chr11_-_64377473	-41182	-	AB050269 NM_144585 NM_153378	-60303	+	TSC_hg19_v1_chr11_-_64490666 AB023138 BC150275 NM_015080 NM_138732	72081	-	HQ258466 AB590919 TSC_hg19_v1_chr11_-_64510439	91812	-	TSC_hg19_v1_chr11_-_64510461 AK314637	91884	-	NM_138734|NRXN2|9379|neurexin 2##AB050269|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_144585|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_153378|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##AB023138|NRXN2|9379|neurexin 2##BC150275|NRXN2|9379|neurexin 2##NM_015080|NRXN2|9379|neurexin 2##NM_138732|NRXN2|9379|neurexin 2##HQ258466|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AK314637|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)	0.180015	
chr12	115919098	115919244	reg1024016.p2	5.167	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-797031	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1072953	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1075247	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	795779	-	TSC_hg19_v1_chr12_-_116715263 AY338463	795989	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	1052058	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.758291	CTCF.p2:39:0.758
chr16	31212269	31212411	reg1030425.p1	5.167	+	AB208902 TSC_hg19_v1_chr16_+_31191471 X71428 X71427 BC026062 BC002459 U00942 AB527797 BT007131 CR456747 DQ891705 DQ894882 U36561	-20838	+	TSC_hg19_v1_chr16_+_31191463 BC000402	-20876	+	AK299129 TSC_hg19_v1_chr16_+_31191461	-20879	+	BC013569 AF310103 AB464112 TSC_hg19_v1_chr16_-_31214046 AK000211	1686	-	TSC_hg19_v1_chr16_-_31214064 AF384665 AF184073 AF255794 AK314422 AB023416 NM_013258 NM_145182 BC004470	1810	-	NM_001008274 BC033211 AK131485	13037	+	AB208902|FUS|2521|fused in sarcoma##X71428|FUS|2521|fused in sarcoma##BC026062|FUS|2521|fused in sarcoma##BC002459|FUS|2521|fused in sarcoma##U00942|FUS|2521|fused in sarcoma##BT007131|FUS|2521|fused in sarcoma##CR456747|FUS|2521|fused in sarcoma##DQ891705|FUS|2521|fused in sarcoma##DQ894882|FUS|2521|fused in sarcoma##U36561|FUS|2521|fused in sarcoma##BC000402|FUS|2521|fused in sarcoma##AK299129|FUS|2521|fused in sarcoma##BC013569|PYCARD|29108|PYD and CARD domain containing##AF310103|PYCARD|29108|PYD and CARD domain containing##AK000211|PYCARD|29108|PYD and CARD domain containing##AF384665|PYCARD|29108|PYD and CARD domain containing##AF184073|PYCARD|29108|PYD and CARD domain containing##AF255794|PYCARD|29108|PYD and CARD domain containing##AK314422|PYCARD|29108|PYD and CARD domain containing##AB023416|PYCARD|29108|PYD and CARD domain containing##NM_013258|PYCARD|29108|PYD and CARD domain containing##NM_145182|PYCARD|29108|PYD and CARD domain containing##BC004470|PYCARD|29108|PYD and CARD domain containing##NM_001008274|TRIM72|493829|tripartite motif containing 72##BC033211|TRIM72|493829|tripartite motif containing 72##AK131485|TRIM72|493829|tripartite motif containing 72	0.0	
chr2	20776505	20776686	reg1026152.p2	5.167	+	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-129763	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-226176	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-249462	-	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	74253	-	AF522369 NM_182828	89828	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	246258	-	AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43	0.0	
chr6_ssto_hap7	2031072	2031161	reg1026981.p1	5.167	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.996692	CTCF.p2:0:0.997
chr8	82553827	82553946	reg1030407.p1	5.167	+	NM_001105281 EU733650 BC146973 BC146981	-110306	-	AB590738 BT006809 CR456903 J02874 TSC_hg19_v1_chr8_-_82395472 BC003672 NM_001442	-158448	-	AB528797 NM_001080526	-180129	-	AK300750 TSC_hg19_v1_chr8_-_82598565 AK312823 AK297078 BC008381 BC009565 AF042729 NM_001144878 NM_001144879 NM_005536	44666	-	AY825924 NM_001010893 BC136625 BC136631	53360	-	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	79640	-	NM_001105281|FABP12|646486|fatty acid binding protein 12##EU733650|FABP12|646486|fatty acid binding protein 12##BC146973|FABP12|646486|fatty acid binding protein 12##BC146981|FABP12|646486|fatty acid binding protein 12##BT006809|FABP4|2167|fatty acid binding protein 4, adipocyte##CR456903|FABP4|2167|fatty acid binding protein 4, adipocyte##J02874|FABP4|2167|fatty acid binding protein 4, adipocyte##BC003672|FABP4|2167|fatty acid binding protein 4, adipocyte##NM_001442|FABP4|2167|fatty acid binding protein 4, adipocyte##NM_001080526|FABP9|646480|fatty acid binding protein 9, testis##AK300750|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AK312823|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AK297078|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##BC008381|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##BC009565|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AF042729|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##NM_001144878|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##NM_001144879|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##NM_005536|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AY825924|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##NM_001010893|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136625|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136631|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1	0.341596	CTCF.p2:8:0.342
chr11	69064844	69065024	reg1028029.p2	5.166	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	-3312	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-207408	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-248508	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	390922	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	390976	+	BC000076 BC001501 BC014078 TSC_hg19_v1_chr11_+_69455939 M73554 BC023620	391016	+	AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1##BC000076|CCND1|595|cyclin D1##BC001501|CCND1|595|cyclin D1##BC014078|CCND1|595|cyclin D1##M73554|CCND1|595|cyclin D1##BC023620|CCND1|595|cyclin D1	0.0	
chr17	38473719	38473873	reg1026100.p1	5.166	+	NM_000964 BC008727 AK312564	-8362	+	TSC_hg19_v1_chr17_+_38444176 BC025232 AF022109	-29582	+	TSC_hg19_v1_chr17_+_38444134 NM_001254 U77949	-29656	+	NM_001145301 NM_001145302 TSC_hg19_v1_chr17_+_38474476	684	+	TSC_hg19_v1_chr17_+_38474521 AK292205 FJ487576	728	+	TSC_hg19_v1_chr17_+_38474548 AK130192	751	+	NM_000964|RARA|5914|retinoic acid receptor, alpha##BC008727|RARA|5914|retinoic acid receptor, alpha##AK312564|RARA|5914|retinoic acid receptor, alpha##BC025232|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##AF022109|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##NM_001254|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##U77949|CDC6|990|cell division cycle 6 homolog (S. cerevisiae)##NM_001145301|RARA|5914|retinoic acid receptor, alpha##NM_001145302|RARA|5914|retinoic acid receptor, alpha##AK292205|RARA|5914|retinoic acid receptor, alpha##FJ487576|RARA|5914|retinoic acid receptor, alpha##AK130192|RARA|5914|retinoic acid receptor, alpha	0.0	
chrX	50684800	50684903	reg1027708.p1	5.166	+	BC117264 BC117266 NM_005448 BC069155 HQ258214	-31093	+	TSC_hg19_v1_chrX_-_50557118 AB033028 BC151240 NM_020717	-127740	-	TSC_hg19_v1_chrX_-_50386679 AY044234	-298174	-	AF469196 NM_153183	390231	+	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	390852	+	AB528198 AM392606 AK001490 TSC_hg19_v1_chrX_-_51239368	554481	-	BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AB033028|SHROOM4|57477|shroom family member 4##BC151240|SHROOM4|57477|shroom family member 4##NM_020717|SHROOM4|57477|shroom family member 4##AY044234|SHROOM4|57477|shroom family member 4##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AM392606|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK001490|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11	0.992003	CTCF.p2:-7:0.992
chr7	24852287	24852390	reg1000947.p2	5.165	+	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-54741	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-54999	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	-55271	-	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	167406	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	312539	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	312602	-	NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic	0.0	
chr1	33546514	33546644	reg1027292.p1	5.164	+	TSC_hg19_v1_chr1_-_33502485 NM_001199199 NM_001625 NM_013411	-44079	-	AB005622 TSC_hg19_v1_chr1_-_33502470	-44104	-	TSC_hg19_v1_chr1_-_33502465 AB005621	-44113	-	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	154	+	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	101069	-	TSC_hg19_v1_chr1_+_33722167 NM_152493	175586	+	NM_001199199|AK2|204|adenylate kinase 2##NM_001625|AK2|204|adenylate kinase 2##NM_013411|AK2|204|adenylate kinase 2##AB005622|AK2|204|adenylate kinase 2##AB005621|AK2|204|adenylate kinase 2##BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##NM_152493|ZNF362|149076|zinc finger protein 362	0.0	
chr15	31577987	31578168	reg1020856.p1	5.164	+	NM_001243538	-55028	-	GQ502181 HM135791 NM_001252020	-124649	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-184160	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	41261	+	AJ430383 NM_130901	369464	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	584752	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.0	
chr3	156848313	156848483	reg1004742.p1	5.164	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-304287	+	BC034397 NM_001184718	-453946	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-454983	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	29511	-	NM_020307 AK122738	30116	-	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	306252	+	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long	0.014622	
chr4	4169063	4169168	reg1027907.p1	5.164	+	BC044637 TSC_hg19_v1_chr4_-_3957162	-211960	-	J03853 NM_000683	-400820	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-400997	+	BC130430 BC130432 NM_177998	59502	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	80833	-	TSC_hg19_v1_chr4_-_4291782 AL136750 NM_001145725	122652	-	BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128##AL136750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_001145725|LYAR|55646|Ly1 antibody reactive homolog (mouse)	0.200253	
chr7	105819297	105819439	reg1026491.p2	5.164	+	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	-66353	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	-66624	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	-66687	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	105994	-	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	106155	-	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	482135	-	EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##X61382|SYPL1|6856|synaptophysin-like 1##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74	0.532147	CTCF.p2:-36:0.532
chr10	86425734	86425870	reg1030672.p1	5.163	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-241107	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-294184	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-337408	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	1700461	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	1855692	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	1855728	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.999611	CTCF.p2:17:1.000
chr11	912718	912784	reg1028004.p1	5.163	+	AY037151 TSC_hg19_v1_chr11_-_910842 NM_001142674 NM_001142676 NM_001142677 NM_023947	-1898	-	TSC_hg19_v1_chr11_-_910811 AF212229 AK075413 AK225025 BC095409 AK297743 AK027711	-1941	-	NM_001025237	-68306	+	NM_001142675	2306	-	TSC_hg19_v1_chr11_+_925869 NM_001242837 NM_012305	13081	+	TSC_hg19_v1_chr11_+_925876 AK001986 AK223558 BC006155	13135	+	AY037151|CHID1|66005|chitinase domain containing 1##NM_001142674|CHID1|66005|chitinase domain containing 1##NM_001142676|CHID1|66005|chitinase domain containing 1##NM_001142677|CHID1|66005|chitinase domain containing 1##NM_023947|CHID1|66005|chitinase domain containing 1##AF212229|CHID1|66005|chitinase domain containing 1##AK075413|CHID1|66005|chitinase domain containing 1##AK225025|CHID1|66005|chitinase domain containing 1##BC095409|CHID1|66005|chitinase domain containing 1##AK297743|CHID1|66005|chitinase domain containing 1##AK027711|CHID1|66005|chitinase domain containing 1##NM_001025237|TSPAN4|7106|tetraspanin 4##NM_001142675|CHID1|66005|chitinase domain containing 1##NM_001242837|AP2A2|161|adaptor-related protein complex 2, alpha 2 subunit##NM_012305|AP2A2|161|adaptor-related protein complex 2, alpha 2 subunit##AK001986|AP2A2|161|adaptor-related protein complex 2, alpha 2 subunit##AK223558|AP2A2|161|adaptor-related protein complex 2, alpha 2 subunit##BC006155|AP2A2|161|adaptor-related protein complex 2, alpha 2 subunit	0.0	
chr12	120097208	120097355	reg1031050.p1	5.163	+	NM_001136534 AK296289	-65981	+	BC040553 NM_178499	-324765	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	-480602	+	TSC_hg19_v1_chr12_+_120105769 AK312495 NM_006253 BC017671 AF022116 BC001007 BC001056 BC001823 BC018818 U83994 AK301165 Y12556 AB590811 AJ224515	8571	+	AK123136 TSC_hg19_v1_chr12_-_120241305	144016	-	TSC_hg19_v1_chr12_-_120315112 AY209000 AY257469 BC008127 AY681966 NM_001206999 NM_007174	217812	-	NM_001136534|TMEM233|387890|transmembrane protein 233##AK296289|TMEM233|387890|transmembrane protein 233##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##AK312495|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##NM_006253|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC017671|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AF022116|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001007|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001056|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001823|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC018818|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##U83994|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK301165|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##Y12556|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AJ224515|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK123136|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY209000|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY257469|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##BC008127|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY681966|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_001206999|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_007174|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)	0.329871	CTCF.p2:3:0.330
chr14	39895969	39896089	reg1025747.p1	5.163	+	TSC_hg19_v1_chr14_+_39736592 BC039017 AK315254 BC029513 BC051363 U73682	-159456	+	TSC_hg19_v1_chr14_+_39736287 NM_001247989 NM_001247990 NM_005930 NM_203355 U94780 BC064355 AF338234	-159662	+	TSC_hg19_v1_chr14_+_39735882 AK055791	-160150	+	TSC_hg19_v1_chr14_-_39901371 BX248772	5328	-	BC053537 BC068566 BC030611 NM_203301	5632	-	NM_152447 AK096627	2180738	+	BC039017|CTAGE5|4253|CTAGE family, member 5##AK315254|CTAGE5|4253|CTAGE family, member 5##BC029513|CTAGE5|4253|CTAGE family, member 5##BC051363|CTAGE5|4253|CTAGE family, member 5##U73682|CTAGE5|4253|CTAGE family, member 5##NM_001247989|CTAGE5|4253|CTAGE family, member 5##NM_001247990|CTAGE5|4253|CTAGE family, member 5##NM_005930|CTAGE5|4253|CTAGE family, member 5##NM_203355|CTAGE5|4253|CTAGE family, member 5##U94780|CTAGE5|4253|CTAGE family, member 5##BC064355|CTAGE5|4253|CTAGE family, member 5##AF338234|CTAGE5|4253|CTAGE family, member 5##AK055791|CTAGE5|4253|CTAGE family, member 5##BX248772|FBXO33|254170|F-box protein 33##BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5	0.962527	CTCF.p2:7:0.963
chr20	31879780	31879868	reg1025061.p1	5.163	+	NM_033197 AK290243 AF364078 AK310964 TSC_hg19_v1_chr20_+_31871019 AK313176 BC008429 AY358595	-8840	+	AF417256 AF417257 BC012549 NM_001243193 NM_016583 NM_130852 AK292778 AY359020 AB024937 AF158745 AF439448 AF172993	-56012	+	BC041904 NM_001042439 NM_178466 BC066354	-74687	+	BC001215 TSC_hg19_v1_chr20_-_31989326 AF152097 BC050706 AK027449 AF161516 AK023992 AK222745 AK292075 AK295342 AK309906 AK314532 AY462283 AY462284	109490	-	TSC_hg19_v1_chr20_-_31989330 NM_016082 NM_016408	109515	-	AB590297 DQ893566 DQ896816 AK301800 TSC_hg19_v1_chr20_-_32031570 U40571 BC026215 S81737 AK291994 NM_003098	151737	-	NM_033197|BPIFB1|92747|BPI fold containing family B, member 1##AK290243|BPIFB1|92747|BPI fold containing family B, member 1##AF364078|BPIFB1|92747|BPI fold containing family B, member 1##AK310964|BPIFB1|92747|BPI fold containing family B, member 1##AK313176|BPIFB1|92747|BPI fold containing family B, member 1##BC008429|BPIFB1|92747|BPI fold containing family B, member 1##AY358595|BPIFB1|92747|BPI fold containing family B, member 1##AF417256|BPIFA1|51297|BPI fold containing family A, member 1##AF417257|BPIFA1|51297|BPI fold containing family A, member 1##BC012549|BPIFA1|51297|BPI fold containing family A, member 1##NM_001243193|BPIFA1|51297|BPI fold containing family A, member 1##NM_016583|BPIFA1|51297|BPI fold containing family A, member 1##NM_130852|BPIFA1|51297|BPI fold containing family A, member 1##AK292778|BPIFA1|51297|BPI fold containing family A, member 1##AY359020|BPIFA1|51297|BPI fold containing family A, member 1##AB024937|BPIFA1|51297|BPI fold containing family A, member 1##AF158745|BPIFA1|51297|BPI fold containing family A, member 1##AF439448|BPIFA1|51297|BPI fold containing family A, member 1##AF172993|BPIFA1|51297|BPI fold containing family A, member 1##BC041904|BPIFA3|128861|BPI fold containing family A, member 3##NM_001042439|BPIFA3|128861|BPI fold containing family A, member 3##NM_178466|BPIFA3|128861|BPI fold containing family A, member 3##BC066354|BPIFA3|128861|BPI fold containing family A, member 3##BC001215|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AF152097|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##BC050706|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK027449|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AF161516|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK023992|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK222745|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK292075|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK295342|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK309906|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AK314532|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AY462283|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##AY462284|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##NM_016082|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##NM_016408|CDK5RAP1|51654|CDK5 regulatory subunit associated protein 1##DQ893566|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##DQ896816|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##AK301800|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##U40571|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##BC026215|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##S81737|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##AK291994|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##NM_003098|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)	0.0	
chr6	43322565	43322746	reg1012855.p1	5.163	+	AB463553 AY555741 AY555742 AY555743 AY555744 NM_206922	-46126	-	TSC_hg19_v1_chr6_+_43266009 AK290806 AK309570 AK314822 BC033805 AK290796 BC017963 DQ893614 DQ896844 AF210455 AY050498	-56603	+	TSC_hg19_v1_chr6_+_43265994 NM_006672 NM_153320 AF097518	-56658	+	TSC_hg19_v1_chr6_-_43337215 BC098434 AF090114 NM_014345 BC030687	14587	-	TSC_hg19_v1_chr6_+_43395310 AK000002 NM_001198934	72658	+	AY032599 NM_033450	76833	+	AY555741|CRIP3|401262|cysteine-rich protein 3##AY555742|CRIP3|401262|cysteine-rich protein 3##AY555743|CRIP3|401262|cysteine-rich protein 3##AY555744|CRIP3|401262|cysteine-rich protein 3##NM_206922|CRIP3|401262|cysteine-rich protein 3##AK290806|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK309570|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK314822|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC033805|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290796|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC017963|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ893614|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ896844|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF210455|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AY050498|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_006672|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_153320|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF097518|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC098434|ZNF318|24149|zinc finger protein 318##AF090114|ZNF318|24149|zinc finger protein 318##NM_014345|ZNF318|24149|zinc finger protein 318##BC030687|ZNF318|24149|zinc finger protein 318##AK000002|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_001198934|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##AY032599|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_033450|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10	0.028487	
chr7	127849822	127849905	reg1001533.p1	5.163	+	BC111561 BC111745 AF196976 AJ297858 NM_022143 AK172751 TSC_hg19_v1_chr7_-_127671066 AK314047	-178827	-	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	-557527	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	-557627	+	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	31470	+	CU680694 TSC_hg19_v1_chr7_-_127983862	133991	-	TSC_hg19_v1_chr7_-_127983944 BC013889 AK222716 AK300500 AK295976 AK001239 NM_001166135 NM_018077	134073	-	BC111561|LRRC4|64101|leucine rich repeat containing 4##BC111745|LRRC4|64101|leucine rich repeat containing 4##AF196976|LRRC4|64101|leucine rich repeat containing 4##AJ297858|LRRC4|64101|leucine rich repeat containing 4##NM_022143|LRRC4|64101|leucine rich repeat containing 4##AK172751|LRRC4|64101|leucine rich repeat containing 4##AK314047|LRRC4|64101|leucine rich repeat containing 4##BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin##BC013889|RBM28|55131|RNA binding motif protein 28##AK222716|RBM28|55131|RNA binding motif protein 28##AK300500|RBM28|55131|RNA binding motif protein 28##AK001239|RBM28|55131|RNA binding motif protein 28##NM_001166135|RBM28|55131|RNA binding motif protein 28##NM_018077|RBM28|55131|RNA binding motif protein 28	1.038964	CTCF.p2:-55:0.289
chrX	28195445	28195587	reg1031424.p1	5.163	+	AK128123 NM_001017930	-195951	-	AK057527 NM_182506 BC101307 BC101309 BC101310	-369401	+	BC157859 NM_001136533	-430591	+	AF181284 AJ243874 NM_014271	410103	+	NM_002364 AF015766 AK313347 BC026071 AK223081	2038167	+	AK057441 NM_002365	2053036	+	AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##NM_002364|MAGEB2|4113|melanoma antigen family B, 2##AF015766|MAGEB2|4113|melanoma antigen family B, 2##AK313347|MAGEB2|4113|melanoma antigen family B, 2##BC026071|MAGEB2|4113|melanoma antigen family B, 2##AK223081|MAGEB2|4113|melanoma antigen family B, 2##AK057441|MAGEB3|4114|melanoma antigen family B, 3##NM_002365|MAGEB3|4114|melanoma antigen family B, 3	0.997165	CTCF.p2:-3:0.997
chr19	23466887	23467005	reg1028212.p1	5.162	+	TSC_hg19_v1_chr19_-_23457022 AK023040	-9928	-	AK301230 TSC_hg19_v1_chr19_-_23433196	-33747	-	AK131472 TSC_hg19_v1_chr19_+_23299828	-167140	+	TSC_hg19_v1_chr19_-_23578274 AK300294 L11672 AK291256 NM_003430	111318	-	TSC_hg19_v1_chr19_-_23598839 AK022793	131898	-	TSC_hg19_v1_chr19_-_23598867 BC041431	131923	-	AK023040|LOC100132815|100132815|importin 5 pseudogene##AK301230|ZNF724P|440519|zinc finger protein 724, pseudogene##AK131472|ZNF730|100129543|zinc finger protein 730##AK300294|ZNF91|7644|zinc finger protein 91##L11672|ZNF91|7644|zinc finger protein 91##AK291256|ZNF91|7644|zinc finger protein 91##NM_003430|ZNF91|7644|zinc finger protein 91	0.379625	CTCF.p2:-21:0.380
chr19	27865114	27865221	reg1024422.p2	5.162	+	TSC_hg19_v1_chr19_+_24269988 AF054180 NM_203282 BC056243 AK291286 BC043147 BC139749	-3595198	+	TSC_hg19_v1_chr19_+_24216256 AK092150 AK092080 AK303431	-3648911	+	TSC_hg19_v1_chr19_+_24097711 NM_001244038 AX721133 BC046415 AB593087	-3767473	+	TSC_hg19_v1_chr19_+_28284377 BC024732	419221	+	TSC_hg19_v1_chr19_-_28284831 AK311452	419666	-	TSC_hg19_v1_chr19_+_28284946 AK095009	419761	+	AF054180|ZNF254|9534|zinc finger protein 254##NM_203282|ZNF254|9534|zinc finger protein 254##BC056243|ZNF254|9534|zinc finger protein 254##AK291286|ZNF254|9534|zinc finger protein 254##BC043147|ZNF254|9534|zinc finger protein 254##BC139749|ZNF254|9534|zinc finger protein 254##AK303431|ZNF254|9534|zinc finger protein 254##NM_001244038|ZNF726|730087|zinc finger protein 726##BC046415|ZNF726|730087|zinc finger protein 726##AK311452|LOC148189|148189|uncharacterized LOC148189	0.0	
chr22	35826938	35827029	reg1027468.p1	5.162	+	TSC_hg19_v1_chr22_+_35796295 AB463121 CU013117 CU013405 CU674060 CU678562	-30621	+	TSC_hg19_v1_chr22_+_35796157 BC000142 AK308343 CR456517 X74795 BC003656	-30812	+	TSC_hg19_v1_chr22_+_35796134 NM_006739 AK223323 AK301121 D83986 AK130620 AK291136 AK298624 AK122853 AK312533	-30858	+	TSC_hg19_v1_chr22_+_35936902 AX721069	109919	+	BC013419 NM_014310 CR456477	110410	+	CR541949 CU013116 CU013404 DQ893679 DQ896050 AB528844 CR456516 TSC_hg19_v1_chr22_-_36013480 AK300657 BC014547 NM_005368 AK314057 NM_203378	186445	-	CU013117|MCM5|4174|minichromosome maintenance complex component 5##CU013405|MCM5|4174|minichromosome maintenance complex component 5##BC000142|MCM5|4174|minichromosome maintenance complex component 5##AK308343|MCM5|4174|minichromosome maintenance complex component 5##CR456517|MCM5|4174|minichromosome maintenance complex component 5##X74795|MCM5|4174|minichromosome maintenance complex component 5##BC003656|MCM5|4174|minichromosome maintenance complex component 5##NM_006739|MCM5|4174|minichromosome maintenance complex component 5##AK223323|MCM5|4174|minichromosome maintenance complex component 5##AK301121|MCM5|4174|minichromosome maintenance complex component 5##D83986|MCM5|4174|minichromosome maintenance complex component 5##AK130620|MCM5|4174|minichromosome maintenance complex component 5##AK291136|MCM5|4174|minichromosome maintenance complex component 5##AK298624|MCM5|4174|minichromosome maintenance complex component 5##AK122853|MCM5|4174|minichromosome maintenance complex component 5##AK312533|MCM5|4174|minichromosome maintenance complex component 5##BC013419|RASD2|23551|RASD family, member 2##NM_014310|RASD2|23551|RASD family, member 2##CR456477|RASD2|23551|RASD family, member 2##CR541949|MB|4151|myoglobin##CU013116|MB|4151|myoglobin##CU013404|MB|4151|myoglobin##DQ893679|MB|4151|myoglobin##DQ896050|MB|4151|myoglobin##CR456516|MB|4151|myoglobin##AK300657|MB|4151|myoglobin##BC014547|MB|4151|myoglobin##NM_005368|MB|4151|myoglobin##AK314057|MB|4151|myoglobin##NM_203378|MB|4151|myoglobin	0.619874	CTCF.p2:2:0.620
chr4	68064652	68064751	reg1024007.p1	5.162	+	TSC_hg19_v1_chr4_-_66536182 AB209375	-1528504	-	AK307826 NM_004439 NM_182472	-1529049	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	-2789605	-	CU688992 TSC_hg19_v1_chr4_-_68411171	346422	-	TSC_hg19_v1_chr4_-_68411224 BC030695 BX648166 BC041117 AK307928 AK308170 M95724	346507	-	TSC_hg19_v1_chr4_-_68411282 NM_001812	346577	-	AB209375|EPHA5|2044|EPH receptor A5##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC030695|CENPC1|1060|centromere protein C 1##BX648166|CENPC1|1060|centromere protein C 1##BC041117|CENPC1|1060|centromere protein C 1##AK307928|CENPC1|1060|centromere protein C 1##AK308170|CENPC1|1060|centromere protein C 1##M95724|CENPC1|1060|centromere protein C 1##NM_001812|CENPC1|1060|centromere protein C 1	0.0	
chr5	77596413	77596554	reg1029597.p1	5.162	+	TSC_hg19_v1_chr5_-_77590517 BC020230 BX538041 BC038444 AK291201 NM_003664	-5969	-	TSC_hg19_v1_chr5_-_77590495 U81504	-5991	-	TSC_hg19_v1_chr5_-_77590488 AY623424 AK303300	-6006	-	BC039455 TSC_hg19_v1_chr5_-_77656182	59698	-	TSC_hg19_v1_chr5_-_77656217 AK129849	59732	-	NM_004866 TSC_hg19_v1_chr5_+_77656440 AF038966 AK304452 AK225172 BC009787 BC015065 AK298146 BC034048 AK290225 CR542286 CU677209	59933	+	BC020230|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##BX538041|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##BC038444|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK291201|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##NM_003664|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U81504|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AY623424|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK303300|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK129849|LOC728769|728769|uncharacterized LOC728769##NM_004866|SCAMP1|9522|secretory carrier membrane protein 1##AF038966|SCAMP1|9522|secretory carrier membrane protein 1##AK304452|SCAMP1|9522|secretory carrier membrane protein 1##AK225172|SCAMP1|9522|secretory carrier membrane protein 1##BC009787|SCAMP1|9522|secretory carrier membrane protein 1##BC015065|SCAMP1|9522|secretory carrier membrane protein 1##AK298146|SCAMP1|9522|secretory carrier membrane protein 1##BC034048|SCAMP1|9522|secretory carrier membrane protein 1##AK290225|SCAMP1|9522|secretory carrier membrane protein 1##CR542286|SCAMP1|9522|secretory carrier membrane protein 1	0.242145	CTCF.p2:-12:0.242
chr10	120303708	120303847	reg1028936.p1	5.161	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	-201953	-	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	-497347	+	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	-497733	-	AK313269 AK290461 NM_004248	51381	-	CU691560 TSC_hg19_v1_chr10_-_120514298	210510	-	TSC_hg19_v1_chr10_-_120514483 AJ544771 AK097728	210734	-	AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A##BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AK313269|PRLHR|2834|prolactin releasing hormone receptor##AK290461|PRLHR|2834|prolactin releasing hormone receptor##NM_004248|PRLHR|2834|prolactin releasing hormone receptor##AJ544771|C10orf46|143384|chromosome 10 open reading frame 46##AK097728|C10orf46|143384|chromosome 10 open reading frame 46	1.02176	CTCF.p2:1:1.000
chr16	75353963	75354098	reg1023818.p2	5.161	+	AK124815 NM_001170715	-52080	-	AK295809 NM_001170716	-53338	-	TSC_hg19_v1_chr16_-_75299906 AK302617 NM_001170720 AK027608 AK293808 NM_001170714 NM_001170718	-54205	-	BT009819 CR542111 AB463545 CU674490 DQ890998 EU176574 AK313948 TSC_hg19_v1_chr16_-_75467369 AB009285 D85939 BC000991 NM_006324 AK226031	113295	-	TSC_hg19_v1_chr16_-_75498315 AK094930	144267	-	AM392693 AM393662 AY302139 CU676164 TSC_hg19_v1_chr16_-_75498577	144508	-	AK124815|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170715|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK295809|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170716|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK302617|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170720|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK027608|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK293808|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170714|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170718|BCAR1|9564|breast cancer anti-estrogen resistance 1##BT009819|CFDP1|10428|craniofacial development protein 1##CR542111|CFDP1|10428|craniofacial development protein 1##DQ890998|CFDP1|10428|craniofacial development protein 1##EU176574|CFDP1|10428|craniofacial development protein 1##AK313948|CFDP1|10428|craniofacial development protein 1##AB009285|CFDP1|10428|craniofacial development protein 1##D85939|CFDP1|10428|craniofacial development protein 1##BC000991|CFDP1|10428|craniofacial development protein 1##NM_006324|CFDP1|10428|craniofacial development protein 1##AK226031|CFDP1|10428|craniofacial development protein 1##AK094930|TMEM170A|124491|transmembrane protein 170A##AY302139|TMEM170A|124491|transmembrane protein 170A	0.0	
chr18	28822007	28822177	reg1028916.p1	5.161	+	Z34522 NM_004948 NM_024421 X72925	-79311	-	TSC_hg19_v1_chr18_-_28682275 EF017811 EF017812 X56807 AK297029 AK290313 BX648425 BC063291 NM_004949 NM_024422	-139901	-	CR749226 TSC_hg19_v1_chr18_-_28681542	-140604	-	AF097935 NM_001942 X56654 AB591022	76065	+	AY177664 NM_001134453 NM_177986 AY168788 AY228236 BC132907 BC132909 AY227350	134714	+	AK290367 NM_001944 M76482	205652	+	Z34522|DSC1|1823|desmocollin 1##NM_004948|DSC1|1823|desmocollin 1##NM_024421|DSC1|1823|desmocollin 1##X72925|DSC1|1823|desmocollin 1##EF017811|DSC2|1824|desmocollin 2##EF017812|DSC2|1824|desmocollin 2##X56807|DSC2|1824|desmocollin 2##AK297029|DSC2|1824|desmocollin 2##AK290313|DSC2|1824|desmocollin 2##BX648425|DSC2|1824|desmocollin 2##BC063291|DSC2|1824|desmocollin 2##NM_004949|DSC2|1824|desmocollin 2##NM_024422|DSC2|1824|desmocollin 2##CR749226|DSC2|1824|desmocollin 2##AF097935|DSG1|1828|desmoglein 1##NM_001942|DSG1|1828|desmoglein 1##X56654|DSG1|1828|desmoglein 1##AY177664|DSG4|147409|desmoglein 4##NM_001134453|DSG4|147409|desmoglein 4##NM_177986|DSG4|147409|desmoglein 4##AY168788|DSG4|147409|desmoglein 4##AY228236|DSG4|147409|desmoglein 4##BC132907|DSG4|147409|desmoglein 4##BC132909|DSG4|147409|desmoglein 4##AY227350|DSG4|147409|desmoglein 4##AK290367|DSG3|1830|desmoglein 3##NM_001944|DSG3|1830|desmoglein 3##M76482|DSG3|1830|desmoglein 3	0.0	
chr4	154153972	154154085	reg1023111.p1	5.161	+	TSC_hg19_v1_chr4_+_154125594 AK308731 NM_015271 AB011089 AF220018	-28423	+	BC011052 NM_001130067	-79759	+	NM_033393 AB051514	-289838	+	TSC_hg19_v1_chr4_+_154178530 BC025417	24511	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	111759	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	111847	+	AK308731|TRIM2|23321|tripartite motif containing 2##NM_015271|TRIM2|23321|tripartite motif containing 2##AB011089|TRIM2|23321|tripartite motif containing 2##AF220018|TRIM2|23321|tripartite motif containing 2##BC011052|TRIM2|23321|tripartite motif containing 2##NM_001130067|TRIM2|23321|tripartite motif containing 2##NM_033393|FHDC1|85462|FH2 domain containing 1##AB051514|FHDC1|85462|FH2 domain containing 1##BC025417|TRIM2|23321|tripartite motif containing 2##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)	0.0	
chr9	124446791	124446889	reg1028950.p1	5.161	+	NM_032552	-117442	+	AF378121 AF378122 AF378123 TSC_hg19_v1_chr9_-_124262101 BC045756	-184751	-	BC010703 TSC_hg19_v1_chr9_-_124132529 AK307999 AK304449 AK304518 AK302977 NM_004099 NM_198194	-314298	-	TSC_hg19_v1_chr9_+_124461442 AF367051	14666	+	AY032952 NM_138709	58223	+	TSC_hg19_v1_chr9_-_124855560 AK125178	408748	-	NM_032552|DAB2IP|153090|DAB2 interacting protein##AF378121|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378122|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378123|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC045756|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC010703|STOM|2040|stomatin##AK307999|STOM|2040|stomatin##AK304449|STOM|2040|stomatin##AK304518|STOM|2040|stomatin##AK302977|STOM|2040|stomatin##NM_004099|STOM|2040|stomatin##NM_198194|STOM|2040|stomatin##AF367051|DAB2IP|153090|DAB2 interacting protein##AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11	1.596275	CTCF.p2:-11:0.998	CTCF.p2:82:0.598
chr1	33603567	33603673	reg1024705.p1	5.160	+	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	-56887	+	TSC_hg19_v1_chr1_-_33502485 NM_001199199 NM_001625 NM_013411	-101120	-	AB005622 TSC_hg19_v1_chr1_-_33502470	-101145	-	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	44028	-	TSC_hg19_v1_chr1_+_33722167 NM_152493	118545	+	TSC_hg19_v1_chr1_-_33813262 AK055807	209676	-	BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##NM_001199199|AK2|204|adenylate kinase 2##NM_001625|AK2|204|adenylate kinase 2##NM_013411|AK2|204|adenylate kinase 2##AB005622|AK2|204|adenylate kinase 2##AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##NM_152493|ZNF362|149076|zinc finger protein 362	0.925843	CTCF.p2:-12:0.926
chr18	9722746	9722885	reg1028979.p1	5.160	+	TSC_hg19_v1_chr18_+_9708323 U59877 U57091 AK223505 DQ892578 DQ895794 AF498957 BT020027 BT020028 CR407659	-14452	+	TSC_hg19_v1_chr18_+_9708299 BC001148	-14513	+	AK314809 TSC_hg19_v1_chr18_+_9708269	-14545	+	NM_001098529 NM_032243 AK303045	162927	+	NM_003574 NM_194434 TSC_hg19_v1_chr18_+_9913982	191156	+	TSC_hg19_v1_chr18_+_9914012 AK315577	191192	+	U59877|RAB31|11031|RAB31, member RAS oncogene family##U57091|RAB31|11031|RAB31, member RAS oncogene family##AK223505|RAB31|11031|RAB31, member RAS oncogene family##DQ892578|RAB31|11031|RAB31, member RAS oncogene family##DQ895794|RAB31|11031|RAB31, member RAS oncogene family##AF498957|RAB31|11031|RAB31, member RAS oncogene family##BT020027|RAB31|11031|RAB31, member RAS oncogene family##BT020028|RAB31|11031|RAB31, member RAS oncogene family##CR407659|RAB31|11031|RAB31, member RAS oncogene family##BC001148|RAB31|11031|RAB31, member RAS oncogene family##AK314809|RAB31|11031|RAB31, member RAS oncogene family##NM_001098529|TXNDC2|84203|thioredoxin domain containing 2 (spermatozoa)##NM_032243|TXNDC2|84203|thioredoxin domain containing 2 (spermatozoa)##AK303045|TXNDC2|84203|thioredoxin domain containing 2 (spermatozoa)##NM_003574|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##NM_194434|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AK315577|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa	0.809443	CTCF.p2:18:0.640
chr2	85360071	85360174	reg1028230.p2	5.160	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	-161631	+	TSC_hg19_v1_chr2_+_85198299 NM_020122	-161838	+	TSC_hg19_v1_chr2_+_85133055 M92381	-227060	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	537	+	TSC_hg19_v1_chr2_-_85555100 CU678967 EU176441 EU176775 X94333 BC028219	194950	-	AK223063 TSC_hg19_v1_chr2_-_85555113 AK126465 AK222829 BX640733 AK312479 BC008461 AF027515 AF027516 U62390	195008	-	BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##M92381|TMSB10|9168|thymosin beta 10##BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##EU176441|TGOLN2|10618|trans-golgi network protein 2##EU176775|TGOLN2|10618|trans-golgi network protein 2##X94333|TGOLN2|10618|trans-golgi network protein 2##BC028219|TGOLN2|10618|trans-golgi network protein 2##AK223063|TGOLN2|10618|trans-golgi network protein 2##AK126465|TGOLN2|10618|trans-golgi network protein 2##AK222829|TGOLN2|10618|trans-golgi network protein 2##BX640733|TGOLN2|10618|trans-golgi network protein 2##AK312479|TGOLN2|10618|trans-golgi network protein 2##BC008461|TGOLN2|10618|trans-golgi network protein 2##AF027515|TGOLN2|10618|trans-golgi network protein 2##AF027516|TGOLN2|10618|trans-golgi network protein 2##U62390|TGOLN2|10618|trans-golgi network protein 2	0.862606	CTCF.p2:7:0.863
chr3	152184611	152184738	reg1025928.p1	5.160	+	AY358260 NM_001123228	-125896	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-167481	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	-197329	-	NM_002563 Z49205	368061	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	695352	+	TSC_hg19_v1_chr3_+_152880058 BC012362	695374	+	AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family	0.0	
chr8	83219938	83220046	reg1024987.p1	5.160	+	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	-465519	-	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-575233	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-586466	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	1875467	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	1875551	+	TSC_hg19_v1_chr8_+_85095702 AK095026	1875743	+	AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like	0.998978	CTCF.p2:-28:0.999
chr9	137283217	137283398	reg1027665.p1	5.159	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-64907	+	TSC_hg19_v1_chr9_+_137218317 BC063827 NM_002957	-64992	+	AJ011376 NM_052821 AB464354	-278353	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	250340	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	250503	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	489353	+	BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##BC063827|RXRA|6256|retinoid X receptor, alpha##NM_002957|RXRA|6256|retinoid X receptor, alpha##AJ011376|WDR5|11091|WD repeat domain 5##NM_052821|WDR5|11091|WD repeat domain 5##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##D90279|COL5A1|1289|collagen, type V, alpha 1##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	0.0	
chr10	109774829	109774974	reg1030489.p2	5.158	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-850525	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-1315842	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-3373856	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	1908308	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	1908376	-	NM_019903 AB209810 BC057285	1990880	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.0	
chr10	97044733	97044838	reg1028342.p1	5.158	+	AK126134 NM_207321	-90829	+	M21942 M21941 DQ891400 DQ894579 M17397 M17398 AK303813 Y00498 AK292753 AK293327 AK293328 AK298401 AK315823 BC020596 NM_000770 NM_001198853 NM_001198854 NM_001198855	-215622	-	TSC_hg19_v1_chr10_+_96698414 AK289420 AK298458 BC020754 NM_000771 BC070317 M61855 M61857 BC125054 D00173 M21939 M15331 S46963	-346343	+	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	5997	-	AM393082 NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_006434	156130	-	TSC_hg19_v1_chr10_-_97321129 AB037717 BC152463 AK022468 AK300407 AK304753 AL117472 AM260536 NM_015385 NM_024991	276354	-	AK126134|C10orf129|142827|chromosome 10 open reading frame 129##NM_207321|C10orf129|142827|chromosome 10 open reading frame 129##M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1##AM393082|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1##NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1##AB037717|SORBS1|10580|sorbin and SH3 domain containing 1##BC152463|SORBS1|10580|sorbin and SH3 domain containing 1##AK022468|SORBS1|10580|sorbin and SH3 domain containing 1##AK300407|SORBS1|10580|sorbin and SH3 domain containing 1##AK304753|SORBS1|10580|sorbin and SH3 domain containing 1##AL117472|SORBS1|10580|sorbin and SH3 domain containing 1##AM260536|SORBS1|10580|sorbin and SH3 domain containing 1##NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1##NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1	0.741902	CTCF.p2:-1:0.742
chr1	226832068	226832190	reg1028439.p1	5.158	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-95512	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-95628	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-236326	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	94809	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	226151	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	295817	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.658425	CTCF.p2:8:0.658
chr11	35187529	35187664	reg1023087.p2	5.157	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-26736	+	TSC_hg19_v1_chr11_+_35160821 M59040	-26778	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	-26862	+	TSC_hg19_v1_chr11_+_35198199 AK129808	10616	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	91229	-	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	253115	-	AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##AK129808|CD44|960|CD44 molecule (Indian blood group)##CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.0	
chr1	172307433	172307613	reg1026564.p1	5.157	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-496820	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-556685	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-556709	+	AL035295 NM_139240 BC038410	82305	+	TSC_hg19_v1_chr1_-_172413202 BC006539	105665	-	TSC_hg19_v1_chr1_-_172413207 AK308201	105684	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.0	
chr12	24262491	24262622	reg1028531.p1	5.157	+	BC014929 TSC_hg19_v1_chr12_-_24103967 AK303970	-158595	-	TSC_hg19_v1_chr12_-_24103855 AK299607 AK096569	-158702	-	AK074317 TSC_hg19_v1_chr12_-_24102605 BC065532 AB081589 NM_006940	-159954	-	TSC_hg19_v1_chr12_-_24715349 AB081588 NM_152989 BC060773	452809	-	BC104436 BC104437 TSC_hg19_v1_chr12_-_24737100 AK057456	474537	-	TSC_hg19_v1_chr12_-_25055230 CR749308 BC033864 NM_001178094	792718	-	BC014929|SOX5|6660|SRY (sex determining region Y)-box 5##AK303970|SOX5|6660|SRY (sex determining region Y)-box 5##AK299607|SOX5|6660|SRY (sex determining region Y)-box 5##AK096569|SOX5|6660|SRY (sex determining region Y)-box 5##AK074317|SOX5|6660|SRY (sex determining region Y)-box 5##BC065532|SOX5|6660|SRY (sex determining region Y)-box 5##AB081589|SOX5|6660|SRY (sex determining region Y)-box 5##NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5##AB081588|SOX5|6660|SRY (sex determining region Y)-box 5##NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5##BC060773|SOX5|6660|SRY (sex determining region Y)-box 5##BC104436|LINC00477|144360|long intergenic non-protein coding RNA 477##BC104437|LINC00477|144360|long intergenic non-protein coding RNA 477##AK057456|LINC00477|144360|long intergenic non-protein coding RNA 477##CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	0.021622	
chr15	89182237	89182335	reg1022727.p2	5.157	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	-100	+	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	-17716	+	BC109060 BC109061 BC073867 AK054603 BC064591 AB073887 NM_001144074 NM_017996	-92435	-	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	164400	+	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	256512	-	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	274274	-	BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein	0.0	
chr19	11908527	11908641	reg1005620.p2	5.157	+	NM_152355 TSC_hg19_v1_chr19_+_11877884 AK095956	-30724	+	X51760 BC052597 AK308189 NM_001080493 AK300579 AK303213	-58826	-	NM_145295 BC098416 AK095639 BC006279 AK074846 BC069232	-200293	+	AK297479 NM_152356 AK096593	795	+	TSC_hg19_v1_chr19_+_11925098 AK095252 NM_152357 BC035760	16522	+	AL833935 NM_152262	68259	+	NM_152355|ZNF441|126068|zinc finger protein 441##AK095956|ZNF441|126068|zinc finger protein 441##X51760|ZNF823|55552|zinc finger protein 823##BC052597|ZNF823|55552|zinc finger protein 823##AK308189|ZNF823|55552|zinc finger protein 823##NM_001080493|ZNF823|55552|zinc finger protein 823##AK300579|ZNF823|55552|zinc finger protein 823##AK303213|ZNF823|55552|zinc finger protein 823##NM_145295|ZNF627|199692|zinc finger protein 627##BC098416|ZNF627|199692|zinc finger protein 627##AK095639|ZNF627|199692|zinc finger protein 627##BC006279|ZNF627|199692|zinc finger protein 627##AK074846|ZNF627|199692|zinc finger protein 627##BC069232|ZNF627|199692|zinc finger protein 627##AK297479|ZNF491|126069|zinc finger protein 491##NM_152356|ZNF491|126069|zinc finger protein 491##AK096593|ZNF491|126069|zinc finger protein 491##AK095252|ZNF440|126070|zinc finger protein 440##NM_152357|ZNF440|126070|zinc finger protein 440##BC035760|ZNF440|126070|zinc finger protein 440##AL833935|ZNF439|90594|zinc finger protein 439##NM_152262|ZNF439|90594|zinc finger protein 439	0.153469	
chr20	42709320	42709460	reg1000966.p1	5.157	+	NM_001098798	-134855	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	-164597	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	-165903	+	AL132999 TSC_hg19_v1_chr20_-_42815818 AK304863	106403	-	BC029957 NM_020433 NM_175913	106827	-	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	129966	-	NM_001098798|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##AL132999|JPH2|57158|junctophilin 2##AK304863|JPH2|57158|junctophilin 2##BC029957|JPH2|57158|junctophilin 2##NM_020433|JPH2|57158|junctophilin 2##NM_175913|JPH2|57158|junctophilin 2##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111	0.0	
chr22	19419944	19420124	reg1027347.p2	5.157	+	TSC_hg19_v1_chr22_+_19419346 AK123768	-652	+	TSC_hg19_v1_chr22_-_19419257 NM_003325 X75296 X89887 BC032721	-787	-	TSC_hg19_v1_chr22_-_19419214 BC039835	-839	-	TSC_hg19_v1_chr22_+_19420067 BC009707 NM_003776 AF034091 AJ295637 CR456532 AB528186 CU013132 CU013420 AK057708	13	+	BC030758 CU013050 CU013338 TSC_hg19_v1_chr22_-_19435224 AK299950 AK095271 AK308642 CR456339 BC046204 BC062599 AK289809	15194	-	AK290073 NM_001166242 NM_173793	15706	-	AK123768|MRPL40|64976|mitochondrial ribosomal protein L40##NM_003325|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##X75296|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##X89887|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##BC032721|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##BC039835|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##BC009707|MRPL40|64976|mitochondrial ribosomal protein L40##NM_003776|MRPL40|64976|mitochondrial ribosomal protein L40##AF034091|MRPL40|64976|mitochondrial ribosomal protein L40##AJ295637|MRPL40|64976|mitochondrial ribosomal protein L40##CR456532|MRPL40|64976|mitochondrial ribosomal protein L40##CU013132|MRPL40|64976|mitochondrial ribosomal protein L40##CU013420|MRPL40|64976|mitochondrial ribosomal protein L40##AK057708|MRPL40|64976|mitochondrial ribosomal protein L40##BC030758|C22orf39|128977|chromosome 22 open reading frame 39##AK299950|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##AK095271|C22orf39|128977|chromosome 22 open reading frame 39##AK308642|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##CR456339|C22orf39|128977|chromosome 22 open reading frame 39##BC046204|C22orf39|128977|chromosome 22 open reading frame 39##BC062599|C22orf39|128977|chromosome 22 open reading frame 39##AK289809|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##AK290073|C22orf39|128977|chromosome 22 open reading frame 39##NM_001166242|C22orf39|128977|chromosome 22 open reading frame 39##NM_173793|C22orf39|128977|chromosome 22 open reading frame 39	0.824967	CTCF.p2:-14:0.825
chr8	110294517	110294620	reg1024925.p1	5.157	+	BC105045 BC113360 NM_003301 X72089 D16845 AY493373 HQ258206 X75071	-194872	+	AK055230 NM_153015 BC033057 BC030710	-494762	-	TSC_hg19_v1_chr8_+_109455874 AK290974 D14659 AB384437 CR457402 CU676696 CU692380 HQ447150	-838688	+	AF283302 AK311583 AF521133 NM_001128211 AK307663	47566	-	AK301278 TSC_hg19_v1_chr8_-_110346317 BC000967 AK027897 BC043406 AK315006 BC031258 NM_032869 AF283301	51803	-	TSC_hg19_v1_chr8_+_110346575 NM_001193557 NM_020189 AK095651 AK316560 AK000487 AK290752 BC051878 BC007870	52025	+	BC105045|TRHR|7201|thyrotropin-releasing hormone receptor##BC113360|TRHR|7201|thyrotropin-releasing hormone receptor##NM_003301|TRHR|7201|thyrotropin-releasing hormone receptor##X72089|TRHR|7201|thyrotropin-releasing hormone receptor##D16845|TRHR|7201|thyrotropin-releasing hormone receptor##AY493373|TRHR|7201|thyrotropin-releasing hormone receptor##HQ258206|TRHR|7201|thyrotropin-releasing hormone receptor##X75071|TRHR|7201|thyrotropin-releasing hormone receptor##AK055230|TMEM74|157753|transmembrane protein 74##NM_153015|TMEM74|157753|transmembrane protein 74##BC030710|TMEM74|157753|transmembrane protein 74##AK290974|TTC35|9694|tetratricopeptide repeat domain 35##D14659|TTC35|9694|tetratricopeptide repeat domain 35##CR457402|TTC35|9694|tetratricopeptide repeat domain 35##HQ447150|TTC35|9694|tetratricopeptide repeat domain 35##AF283302|NUDCD1|84955|NudC domain containing 1##AK311583|NUDCD1|84955|NudC domain containing 1##AF521133|NUDCD1|84955|NudC domain containing 1##NM_001128211|NUDCD1|84955|NudC domain containing 1##AK307663|NUDCD1|84955|NudC domain containing 1##AK301278|NUDCD1|84955|NudC domain containing 1##BC000967|NUDCD1|84955|NudC domain containing 1##AK027897|NUDCD1|84955|NudC domain containing 1##BC043406|NUDCD1|84955|NudC domain containing 1##AK315006|NUDCD1|84955|NudC domain containing 1##BC031258|NUDCD1|84955|NudC domain containing 1##NM_032869|NUDCD1|84955|NudC domain containing 1##AF283301|NUDCD1|84955|NudC domain containing 1##NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)	0.51023	CTCF.p2:-8:0.510
chr1	212838882	212838995	reg1002301.p2	5.156	+	AK301981 NM_153606 BC035007	-41137	+	NM_001206486 AB066566 AB078026 AB078027 AB528347 AY313926 AY313927 BT006996 CR450334 DQ892723 DQ895972 AB209032	-50531	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	-56831	+	AB463432 HQ258061 TSC_hg19_v1_chr1_-_212873132	34182	-	TSC_hg19_v1_chr1_-_212873221 BC117489 BC117491	34292	-	TSC_hg19_v1_chr1_-_212873317 AF255346 NM_018664	34382	-	AK301981|FAM71A|149647|family with sequence similarity 71, member A##NM_153606|FAM71A|149647|family with sequence similarity 71, member A##BC035007|FAM71A|149647|family with sequence similarity 71, member A##NM_001206486|ATF3|467|activating transcription factor 3##AB066566|ATF3|467|activating transcription factor 3##AB078026|ATF3|467|activating transcription factor 3##AB078027|ATF3|467|activating transcription factor 3##AY313926|ATF3|467|activating transcription factor 3##AY313927|ATF3|467|activating transcription factor 3##BT006996|ATF3|467|activating transcription factor 3##CR450334|ATF3|467|activating transcription factor 3##DQ892723|ATF3|467|activating transcription factor 3##DQ895972|ATF3|467|activating transcription factor 3##AB209032|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3##HQ258061|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117489|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##BC117491|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##AF255346|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##NM_018664|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3	0.0	
chr14	93117615	93117761	reg1027889.p2	5.156	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-137729	+	NM_153646 AF520704 AF520705 BC069653	-327512	+	AK295059 NM_153647	-328152	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	948	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	1135	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	97271	-	AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain	0.0	
chr17	48350457	48350550	reg1017133.p1	5.156	+	AY358204 NM_001168215	-1737	+	TSC_hg19_v1_chr17_-_48278993 BC036531 Z74615 NM_000088	-71510	-	AB384988 DQ893571 EU176569 CU691368 M36546 X07884 AB209597 TSC_hg19_v1_chr17_-_48278986	-71573	-	NM_153229 AK090637 AX746552 BC064507	1320	+	TSC_hg19_v1_chr17_+_48423495 AJ277442 NM_022167 BC052262 AK299999 BC036069 AY358090	72963	+	BC001066 AB049647 TSC_hg19_v1_chr17_-_48450546 AK023576 BC021986 AF151084 AK315758 NM_016504	100043	-	AY358204|TMEM92|162461|transmembrane protein 92##NM_001168215|TMEM92|162461|transmembrane protein 92##BC036531|COL1A1|1277|collagen, type I, alpha 1##Z74615|COL1A1|1277|collagen, type I, alpha 1##NM_000088|COL1A1|1277|collagen, type I, alpha 1##DQ893571|COL1A1|1277|collagen, type I, alpha 1##EU176569|COL1A1|1277|collagen, type I, alpha 1##M36546|COL1A1|1277|collagen, type I, alpha 1##X07884|COL1A1|1277|collagen, type I, alpha 1##AB209597|COL1A1|1277|collagen, type I, alpha 1##NM_153229|TMEM92|162461|transmembrane protein 92##AK090637|TMEM92|162461|transmembrane protein 92##BC064507|TMEM92|162461|transmembrane protein 92##AJ277442|XYLT2|64132|xylosyltransferase II##NM_022167|XYLT2|64132|xylosyltransferase II##BC052262|XYLT2|64132|xylosyltransferase II##AK299999|XYLT2|64132|xylosyltransferase II##BC036069|XYLT2|64132|xylosyltransferase II##AY358090|XYLT2|64132|xylosyltransferase II##BC001066|MRPL27|51264|mitochondrial ribosomal protein L27##AB049647|MRPL27|51264|mitochondrial ribosomal protein L27##AK023576|MRPL27|51264|mitochondrial ribosomal protein L27##BC021986|MRPL27|51264|mitochondrial ribosomal protein L27##AF151084|MRPL27|51264|mitochondrial ribosomal protein L27##AK315758|MRPL27|51264|mitochondrial ribosomal protein L27##NM_016504|MRPL27|51264|mitochondrial ribosomal protein L27	0.038778	
chr3	156880516	156880675	reg1028847.p1	5.156	+	NM_020307 AK122738	-2081	-	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	-2686	-	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-336484	+	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	274055	+	CU691278 AB384625 HQ258524 AL713656 BC101660 BC113555 NM_001167917	332621	-	AK027625 NM_024621	336798	-	NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long##HQ258524|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AL713656|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC101660|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC113555|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167917|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AK027625|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_024621|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	0.938889	CTCF.p2:2:0.890
chr4	4132750	4132860	reg1024056.p1	5.156	+	BC044637 TSC_hg19_v1_chr4_-_3957162	-175650	-	J03853 NM_000683	-364510	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-364687	+	BC130430 BC130432 NM_177998	95812	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	117143	-	TSC_hg19_v1_chr4_-_4291782 AL136750 NM_001145725	158962	-	BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128##AL136750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_001145725|LYAR|55646|Ly1 antibody reactive homolog (mouse)	0.335251	CTCF.p2:54:0.307
chrX	19881690	19881855	reg1023803.p2	5.156	+	TSC_hg19_v1_chrX_-_19817907 NM_001024666	-63860	-	AK293234 AF542051 TSC_hg19_v1_chrX_-_19817892	-63897	-	TSC_hg19_v1_chrX_-_19689029 AK293237 NM_001184960	-192716	-	TSC_hg19_v1_chrX_-_19905450 AY542305	23691	-	TSC_hg19_v1_chrX_-_19905646 BC050663 BC015806	23860	-	TSC_hg19_v1_chrX_-_19905675 AK313308 AF230904 AY423734 NM_031892	23932	-	NM_001024666|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY542305|SH3KBP1|30011|SH3-domain kinase binding protein 1##BC050663|SH3KBP1|30011|SH3-domain kinase binding protein 1##BC015806|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK313308|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF230904|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY423734|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_031892|SH3KBP1|30011|SH3-domain kinase binding protein 1	0.0	
chr1	234859784	234859923	reg1026815.p2	5.155	+	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-114607	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-115995	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-116022	-	TSC_hg19_v1_chr1_-_234895746 AF193050	35921	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	432236	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	432378	-	BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.0	
chr12	94723251	94723397	reg1024282.p1	5.155	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	-180820	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-652141	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-757723	-	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	130207	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	130318	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	130408	-	AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41	0.041948	
chr16	4378305	4378393	reg1025208.p1	5.155	+	TSC_hg19_v1_chr16_-_4323057 AK309301	-55284	-	NM_003223 S73885 TSC_hg19_v1_chr16_-_4323025	-55337	-	X57435 DQ893617 DQ895293 CR541726 CU679751 AB464303 TSC_hg19_v1_chr16_-_4322885 BC010576	-55521	-	AF325914 NM_032575 AB463687	3902	+	AK095566 TSC_hg19_v1_chr16_+_4385160	6802	+	TSC_hg19_v1_chr16_-_4401268 AF151894 AF349455 BC005024 AK026514 NM_016069	22969	-	AK309301|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##NM_003223|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##S73885|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##X57435|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ893617|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##DQ895293|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##CR541726|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##BC010576|TFAP4|7023|transcription factor AP-4 (activating enhancer binding protein 4)##AF325914|GLIS2|84662|GLIS family zinc finger 2##NM_032575|GLIS2|84662|GLIS family zinc finger 2##AK095566|GLIS2|84662|GLIS family zinc finger 2##AF151894|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AF349455|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##BC005024|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##AK026514|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)##NM_016069|PAM16|51025|presequence translocase-associated motor 16 homolog (S. cerevisiae)	0.0	
chr19	10676038	10676115	reg1025781.p1	5.155	+	TSC_hg19_v1_chr19_+_10654592 AK056210 AK314712 AK316454 BC068992 AK223383 BC007639 NM_032885 AJ312332 CU686689	-21398	+	AK294676 TSC_hg19_v1_chr19_+_10654589	-21496	+	AK074661 NM_001166215	-47440	-	BC009303 TSC_hg19_v1_chr19_-_10676685 AL833189 AK300780	590	-	TSC_hg19_v1_chr19_-_10676697 AK093879 AX748348 NM_023008 AK300850	621	-	CR542158 CU674892 U20498 DQ892872 DQ892951 DQ896120 AB464505 U49399 U40343 TSC_hg19_v1_chr19_-_10679530	3353	-	AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK294676|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK074661|S1PR5|53637|sphingosine-1-phosphate receptor 5##NM_001166215|S1PR5|53637|sphingosine-1-phosphate receptor 5##BC009303|KRI1|65095|KRI1 homolog (S. cerevisiae)##AL833189|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK300780|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK093879|KRI1|65095|KRI1 homolog (S. cerevisiae)##NM_023008|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK300850|KRI1|65095|KRI1 homolog (S. cerevisiae)##CR542158|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U20498|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892872|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892951|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ896120|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U49399|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U40343|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	0.0	
chr19	48293767	48293878	reg1027744.p1	5.155	+	NM_003009 TSC_hg19_v1_chr19_+_48281965 BC039597 BC032546 BC047893 BC000581 U67171 AF015283	-11896	+	TSC_hg19_v1_chr19_+_48248802 AK303180 AK297877 AK303918 AK309788 AK301117 AF182076 BC006311 BC013203 AY535000 CU679611 DQ892724 DQ895973 AK024486 BC013235 BC013307 BC014009 BC039869 BC007248 BC004229 AF296124 AL359336 AL359335	-44987	+	NM_015710 TSC_hg19_v1_chr19_+_48248797	-45028	+	BC137501 BC141863 BC144673 AK097640 NM_198479	13015	-	NM_000554 DQ426868 BC016664 DQ426867 BC053672	31333	+	CU676700 DQ891165 DQ894346 U08024 L20000 X70222 TSC_hg19_v1_chr19_-_48389554 X84816 U08025	95716	-	NM_003009|SEPW1|6415|selenoprotein W, 1##BC039597|SEPW1|6415|selenoprotein W, 1##BC032546|SEPW1|6415|selenoprotein W, 1##BC047893|SEPW1|6415|selenoprotein W, 1##BC000581|SEPW1|6415|selenoprotein W, 1##U67171|SEPW1|6415|selenoprotein W, 1##AF015283|SEPW1|6415|selenoprotein W, 1##AK297877|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK303918|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK309788|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK301117|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF182076|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC006311|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013203|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AY535000|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ892724|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ895973|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK024486|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013235|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013307|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC014009|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC039869|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC007248|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC004229|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF296124|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359336|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359335|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##NM_015710|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC137501|TPRX1|284355|tetra-peptide repeat homeobox 1##BC141863|TPRX1|284355|tetra-peptide repeat homeobox 1##BC144673|TPRX1|284355|tetra-peptide repeat homeobox 1##AK097640|TPRX1|284355|tetra-peptide repeat homeobox 1##NM_198479|TPRX1|284355|tetra-peptide repeat homeobox 1##NM_000554|CRX|1406|cone-rod homeobox##DQ426868|CRX|1406|cone-rod homeobox##BC016664|CRX|1406|cone-rod homeobox##DQ426867|CRX|1406|cone-rod homeobox##BC053672|CRX|1406|cone-rod homeobox##DQ891165|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ894346|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08024|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L20000|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X70222|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X84816|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08025|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	1.07985	CTCF.p2:-5:1.000
chr11	75162658	75162774	reg1026472.p2	5.154	+	TSC_hg19_v1_chr11_-_75141540 NM_001039548	-21121	-	TSC_hg19_v1_chr11_-_75141247 BC042952 BC057763	-21485	-	HQ258227 BC132708 BC132710 TSC_hg19_v1_chr11_-_75141083 AK091109 AX746783	-21656	-	BC090053 AF318351 NM_030792	73792	-	AF318377 TSC_hg19_v1_chr11_-_75236890	74162	-	NM_001207014 NM_001235 TSC_hg19_v1_chr11_+_75273168 AK290124	110419	+	NM_001039548|KLHL35|283212|kelch-like 35 (Drosophila)##BC042952|KLHL35|283212|kelch-like 35 (Drosophila)##BC057763|KLHL35|283212|kelch-like 35 (Drosophila)##HQ258227|KLHL35|283212|kelch-like 35 (Drosophila)##BC132708|KLHL35|283212|kelch-like 35 (Drosophila)##BC132710|KLHL35|283212|kelch-like 35 (Drosophila)##AK091109|KLHL35|283212|kelch-like 35 (Drosophila)##BC090053|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##AF318351|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##NM_030792|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##AF318377|GDPD5|81544|glycerophosphodiester phosphodiesterase domain containing 5##NM_001207014|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##NM_001235|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)##AK290124|SERPINH1|871|serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1)	0.995355	CTCF.p2:-14:0.995
chr19	54834284	54834409	reg1029760.p1	5.154	+	AF499917 EU915611 EU915612 AF499916 AF499919 AF499918 AF324830 NM_021250 NM_181879 NM_181985 NM_181986	-9971	-	AF014923 AF014924 AF041262 CU688428 DQ891075 DQ894258 AB590305 NM_001172654 U91926 BC028208 AF025527 NM_006865 TSC_hg19_v1_chr19_-_54804279	-30109	-	BC036827 AF283986 AF025528 BC025766 TSC_hg19_v1_chr19_-_54784966 AK297071 AK226015 AK297041 NM_001080978 NM_005874	-49369	-	BC109198 BC109199 NM_012276	16056	-	CR542051 CU693316 DQ892072 DQ895266 AF251509 AF251510 BC027899 AF109683 AF013249 AK309895 TSC_hg19_v1_chr19_-_54876492	42106	-	TSC_hg19_v1_chr19_-_54876541 AK290415 AK315419	42205	-	AF499917|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##EU915611|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##EU915612|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499916|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499919|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499918|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF324830|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_021250|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181879|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181985|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181986|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF014923|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF014924|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF041262|LILRA6|79168|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6##DQ891075|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##DQ894258|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##NM_001172654|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##U91926|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##BC028208|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF025527|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##NM_006865|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##BC036827|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AF283986|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AF025528|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##BC025766|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK297071|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK226015|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK297041|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##NM_001080978|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##NM_005874|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##BC109198|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##BC109199|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##NM_012276|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##CR542051|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##DQ892072|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##DQ895266|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF251509|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF251510|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##BC027899|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF109683|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF013249|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK309895|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK290415|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK315419|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1	0.830069	CTCF.p2:10:0.830
chr5	34523504	34523684	reg1001353.p2	5.154	+	EU399231 EU399232 BC112925 AF329837 BC120990 AF326976 AY358388 AK075533 BX640995 AK315921 AK295968 NM_030945 NM_181435	-480292	-	TSC_hg19_v1_chr5_-_34008240 AK225749	-515350	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	-515431	-	TSC_hg19_v1_chr5_+_34656432 NM_001145522 NM_015577	132819	+	TSC_hg19_v1_chr5_+_34656506 BC052988 AF155135 AK314379	132918	+	AB037755 NM_001145520 TSC_hg19_v1_chr5_+_34656599	133003	+	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK225749|AMACR|23600|alpha-methylacyl-CoA racemase##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001145522|RAI14|26064|retinoic acid induced 14##NM_015577|RAI14|26064|retinoic acid induced 14##BC052988|RAI14|26064|retinoic acid induced 14##AF155135|RAI14|26064|retinoic acid induced 14##AK314379|RAI14|26064|retinoic acid induced 14##AB037755|RAI14|26064|retinoic acid induced 14##NM_001145520|RAI14|26064|retinoic acid induced 14	0.0	
chr10	94516341	94516484	reg1026980.p1	5.153	+	TSC_hg19_v1_chr10_+_94449711 NM_002729 AK309463 AK314891 BC014336 BC015110 L16499 X67235 AB528006 BC050638 EU446478	-66703	+	TSC_hg19_v1_chr10_+_94352960 BC126211 BC136474 U37426 X85137	-163369	+	TSC_hg19_v1_chr10_+_94352886 BC050421 BC050667 AK314258	-163515	+	NM_001013848	78057	+	AK293857 NM_019053 AF220217 TSC_hg19_v1_chr10_+_94608276 AL832501 EF571007 AK315544 BC028395 CU688490 EU832839 GQ129240	91845	+	AY356349 NM_183374	304608	+	NM_002729|HHEX|3087|hematopoietically expressed homeobox##AK314891|HHEX|3087|hematopoietically expressed homeobox##BC014336|HHEX|3087|hematopoietically expressed homeobox##BC015110|HHEX|3087|hematopoietically expressed homeobox##L16499|HHEX|3087|hematopoietically expressed homeobox##X67235|HHEX|3087|hematopoietically expressed homeobox##BC050638|HHEX|3087|hematopoietically expressed homeobox##EU446478|HHEX|3087|hematopoietically expressed homeobox##BC126211|KIF11|3832|kinesin family member 11##BC136474|KIF11|3832|kinesin family member 11##U37426|KIF11|3832|kinesin family member 11##X85137|KIF11|3832|kinesin family member 11##BC050421|KIF11|3832|kinesin family member 11##BC050667|KIF11|3832|kinesin family member 11##AK314258|KIF11|3832|kinesin family member 11##NM_001013848|EXOC6|54536|exocyst complex component 6##AK293857|EXOC6|54536|exocyst complex component 6##NM_019053|EXOC6|54536|exocyst complex component 6##AF220217|EXOC6|54536|exocyst complex component 6##AL832501|EXOC6|54536|exocyst complex component 6##EF571007|EXOC6|54536|exocyst complex component 6##AK315544|EXOC6|54536|exocyst complex component 6##BC028395|EXOC6|54536|exocyst complex component 6##EU832839|EXOC6|54536|exocyst complex component 6##GQ129240|EXOC6|54536|exocyst complex component 6##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1	0.0	
chr11	11178866	11179006	reg1031235.p1	5.153	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-299150	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-299418	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-348139	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	464642	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	684080	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	684555	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.937912	CTCF.p2:-1:0.938
chr20	52516364	52516544	reg1029575.p1	5.153	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-305655	-	AF041259 NM_006526	-316819	-	AK302570 NM_001193421	-714633	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	170608	-	AK315220 NM_003657	170849	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	274066	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr2	145089574	145089680	reg1024372.p2	5.153	+	AY281366 NM_001006636	-37568	-	NM_024659	-94722	-	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	-1202636	+	BC017741 AK291357 TSC_hg19_v1_chr2_-_145090037 BC061699	405	-	BX647773 TSC_hg19_v1_chr2_-_145090075 BX647436 NM_001164629	437	-	AB193095 AB193096 AB463360 TSC_hg19_v1_chr2_-_145274968	185315	-	AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1##AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##BC017741|GTDC1|79712|glycosyltransferase-like domain containing 1##AK291357|GTDC1|79712|glycosyltransferase-like domain containing 1##BC061699|GTDC1|79712|glycosyltransferase-like domain containing 1##BX647773|GTDC1|79712|glycosyltransferase-like domain containing 1##BX647436|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001164629|GTDC1|79712|glycosyltransferase-like domain containing 1##AB193095|ZEB2|9839|zinc finger E-box binding homeobox 2##AB193096|ZEB2|9839|zinc finger E-box binding homeobox 2	0.0	
chr2	43401617	43401787	reg1027209.p2	5.153	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-381951	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-410402	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-605805	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	51643	-	TSC_hg19_v1_chr2_-_43453736 BC020369	52028	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	52040	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.0	
chr4	100298645	100298733	reg1024491.p2	5.153	+	CU688112 BC074786 BC066227 BC066228 BC067419 BC067420 BC067421 BC067422 BC074771 BC062476 M12272 X04299 TSC_hg19_v1_chr4_-_100273904 NM_000669	-24816	-	BT019812 D00137 M24317 M21692 AK304396 BX647469 AF153821 AK299409 AK316501 X03350 AK301018 AK303945 AK311712 BC033009 TSC_hg19_v1_chr4_-_100242559 NM_000668	-56160	-	M12271 BC074738 BC117442 BC126306 AK290558 M12963 AK309597 NM_000667	-86555	-	AK301696 NM_001166504	57601	-	X76342 AK223472 BC131512 U07821 AK301657 AK310811 AK312854 NM_000673	57868	-	NM_032149 AK093085 AX747911 AK223345 AK314711 AL136838	133490	+	BC074786|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC066227|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC066228|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067419|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067420|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067421|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067422|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC074771|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC062476|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##M12272|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##X04299|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##NM_000669|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BT019812|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##D00137|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##M24317|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##M21692|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK304396|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##BX647469|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AF153821|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK299409|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK316501|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##X03350|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK301018|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK303945|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##BC033009|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##NM_000668|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##M12271|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##BC074738|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##BC117442|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##BC126306|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##AK290558|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##M12963|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##AK309597|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##NM_000667|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##AK301696|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_001166504|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##X76342|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK223472|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##BC131512|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##U07821|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK301657|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK310811|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK312854|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_000673|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_032149|C4orf17|84103|chromosome 4 open reading frame 17##AK093085|C4orf17|84103|chromosome 4 open reading frame 17##AK223345|C4orf17|84103|chromosome 4 open reading frame 17##AK314711|C4orf17|84103|chromosome 4 open reading frame 17##AL136838|C4orf17|84103|chromosome 4 open reading frame 17	0.02007	
chr12	104998432	104998612	reg1025695.p2	5.152	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-147435	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-147714	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-147751	+	TSC_hg19_v1_chr12_+_105153261 AF131762	154755	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	323741	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	381568	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.0	
chr15	64429654	64429777	reg1025368.p1	5.152	+	TSC_hg19_v1_chr15_+_64388200 AK310618 BC000357 AK222793 AB528736 AF065483 AF065484 BT006983 DQ890751 DQ893918	-41509	+	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	-41575	+	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	-43618	-	TSC_hg19_v1_chr15_+_64443922 AK126655 AK024014 NM_024798 BC019655 BC036532 BC014660 BC030225 AY044653	14226	+	M60457 M60857 TSC_hg19_v1_chr15_-_64455171	25454	-	AB528494 CR456829 CU679145 DQ892289 DQ895488 TSC_hg19_v1_chr15_-_64455184	25470	-	AK310618|SNX1|6642|sorting nexin 1##BC000357|SNX1|6642|sorting nexin 1##AK222793|SNX1|6642|sorting nexin 1##AF065483|SNX1|6642|sorting nexin 1##AF065484|SNX1|6642|sorting nexin 1##BT006983|SNX1|6642|sorting nexin 1##DQ890751|SNX1|6642|sorting nexin 1##DQ893918|SNX1|6642|sorting nexin 1##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##AK126655|SNX22|79856|sorting nexin 22##AK024014|SNX22|79856|sorting nexin 22##NM_024798|SNX22|79856|sorting nexin 22##BC019655|SNX22|79856|sorting nexin 22##BC036532|SNX22|79856|sorting nexin 22##BC014660|SNX22|79856|sorting nexin 22##BC030225|SNX22|79856|sorting nexin 22##AY044653|SNX22|79856|sorting nexin 22##M60457|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##M60857|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##CR456829|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##DQ892289|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)##DQ895488|PPIB|5479|peptidylprolyl isomerase B (cyclophilin B)	0.954418	CTCF.p2:13:0.954
chr16	57079629	57079769	reg1004399.p1	5.152	+	AF389420 EF452236 TSC_hg19_v1_chr16_+_57054697	-25039	+	AK074182 NM_032206	-28714	+	TSC_hg19_v1_chr16_+_57023474 AK097030	-56239	+	TSC_hg19_v1_chr16_+_57126462 NM_152727	46766	+	TSC_hg19_v1_chr16_+_57126513 AF492484 BC053658	46809	+	TSC_hg19_v1_chr16_+_57126530 AK315394	46874	+	AF389420|NLRC5|84166|NLR family, CARD domain containing 5##EF452236|NLRC5|84166|NLR family, CARD domain containing 5##AK074182|NLRC5|84166|NLR family, CARD domain containing 5##NM_032206|NLRC5|84166|NLR family, CARD domain containing 5##AK097030|NLRC5|84166|NLR family, CARD domain containing 5##NM_152727|CPNE2|221184|copine II##AF492484|CPNE2|221184|copine II##BC053658|CPNE2|221184|copine II##AK315394|CPNE2|221184|copine II	0.0	
chr19	49838658	49838801	reg1025254.p1	5.152	+	TSC_hg19_v1_chr19_+_49838702 AL833693 BC110379	-17	+	TSC_hg19_v1_chr19_+_49838683 NM_001040031 NM_001774 AK301328	-51	+	TSC_hg19_v1_chr19_+_49838662 AK301016	-71	+	X14046 TSC_hg19_v1_chr19_+_49838746 BC106752 AK316348 BT019851 CR541877	36	+	AL832240 BC051301 TSC_hg19_v1_chr19_-_49865672 AK300241 AK290736 BC007556 NM_003598	26946	-	NM_001197302 AY358922 NM_001197301 NM_014419 BC030581 AF177398	28367	+	AL833693|CD37|951|CD37 molecule##BC110379|CD37|951|CD37 molecule##NM_001040031|CD37|951|CD37 molecule##NM_001774|CD37|951|CD37 molecule##AK301328|CD37|951|CD37 molecule##AK301016|CD37|951|CD37 molecule##X14046|CD37|951|CD37 molecule##BC106752|CD37|951|CD37 molecule##BT019851|CD37|951|CD37 molecule##CR541877|CD37|951|CD37 molecule##AL832240|TEAD2|8463|TEA domain family member 2##BC051301|TEAD2|8463|TEA domain family member 2##AK300241|TEAD2|8463|TEA domain family member 2##AK290736|TEAD2|8463|TEA domain family member 2##BC007556|TEAD2|8463|TEA domain family member 2##NM_003598|TEAD2|8463|TEA domain family member 2##NM_001197302|DKKL1|27120|dickkopf-like 1##AY358922|DKKL1|27120|dickkopf-like 1##NM_001197301|DKKL1|27120|dickkopf-like 1##NM_014419|DKKL1|27120|dickkopf-like 1##BC030581|DKKL1|27120|dickkopf-like 1##AF177398|DKKL1|27120|dickkopf-like 1	0.0	
chr4	181830554	181830689	reg1028242.p1	5.152	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-3466978	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-3467028	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-3467080	-	TSC_hg19_v1_chr4_+_183065111 AK308489	1234504	+	NM_001080477 HE578284 HE578285	1414533	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	2007909	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.0	
chrX	1640508	1640683	reg1028334.p1	5.152	+	AK301844 NM_001173473	-67944	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-68794	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-129626	-	BC043610 GQ280263 NM_178129 AK126147	15443	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	69934	+	NM_004043 U11090	73752	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr15	28949342	28949446	reg1025065.p2	5.151	+	AF071172 BC015486 BC142951 BC045544 NM_004667	-382123	-	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	-604961	-	NM_033223 BC029850 BC045709 S82769	-1732847	+	TSC_hg19_v1_chr15_+_29033278 AK302529	83929	+	TSC_hg19_v1_chr15_+_29077475 BC018626	128088	+	NM_001130414 NM_005503 AF047348 BC082986	264455	+	AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2##M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2	0.864445	CTCF.p2:0:0.836
chr15	38706681	38706781	reg1025977.p2	5.151	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	-161709	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	-162336	+	BC029221 NM_152453	-479275	+	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	39614	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	150200	-	AK093014 AX747856 BC119016 BC119810 NM_207444	282067	+	NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53	0.822473	CTCF.p2:25:0.822
chr15	44794079	44794253	reg1025716.p2	5.151	+	TSC_hg19_v1_chr15_+_44719836 BC018623 AK226094 DQ128104 BC035744	-74256	+	TSC_hg19_v1_chr15_+_44719826 AK291230 AF161478 AF161543	-74370	+	NM_016396	-74588	+	TSC_hg19_v1_chr15_-_44828876 AK092547 BC042851	34720	-	NM_003758 TSC_hg19_v1_chr15_+_44829270	35110	+	TSC_hg19_v1_chr15_+_44829313 AK023388	35146	+	BC018623|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##AK226094|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##DQ128104|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##BC035744|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##AK291230|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##AF161478|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##AF161543|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##NM_016396|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##NM_003758|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J##AK023388|EIF3J|8669|eukaryotic translation initiation factor 3, subunit J	0.96935	CTCF.p2:10:0.969
chr17	9891227	9891381	reg1027135.p1	5.151	+	AJ224876 NM_003644 AK293834 AK315162	-28533	-	AB001838 BT009838 AB528320 DQ892822 DQ896068 BC001720 S62028 S45545 AB593156 NM_002903 S43855	-82715	-	TSC_hg19_v1_chr17_+_9745847 BC041176 BC019818	-145445	+	AB385324 BT006891 DQ892802 DQ895910 CU674584 AB209030 AK294829 TSC_hg19_v1_chr17_-_9923322	31959	-	TSC_hg19_v1_chr17_-_9923331 AK309722	32088	-	TSC_hg19_v1_chr17_-_9929603 AB007854 AK225165 AK299574 NM_001130831	38317	-	AJ224876|GAS7|8522|growth arrest-specific 7##NM_003644|GAS7|8522|growth arrest-specific 7##AK293834|GAS7|8522|growth arrest-specific 7##AK315162|GAS7|8522|growth arrest-specific 7##AB001838|RCVRN|5957|recoverin##BT009838|RCVRN|5957|recoverin##DQ892822|RCVRN|5957|recoverin##DQ896068|RCVRN|5957|recoverin##BC001720|RCVRN|5957|recoverin##S62028|RCVRN|5957|recoverin##S45545|RCVRN|5957|recoverin##AB593156|RCVRN|5957|recoverin##NM_002903|RCVRN|5957|recoverin##S43855|RCVRN|5957|recoverin##BC041176|GLP2R|9340|glucagon-like peptide 2 receptor##BC019818|GLP2R|9340|glucagon-like peptide 2 receptor##BT006891|GAS7|8522|growth arrest-specific 7##DQ892802|GAS7|8522|growth arrest-specific 7##DQ895910|GAS7|8522|growth arrest-specific 7##AB209030|GAS7|8522|growth arrest-specific 7##AK294829|GAS7|8522|growth arrest-specific 7##AK309722|GAS7|8522|growth arrest-specific 7##AB007854|GAS7|8522|growth arrest-specific 7##AK225165|GAS7|8522|growth arrest-specific 7##AK299574|GAS7|8522|growth arrest-specific 7##NM_001130831|GAS7|8522|growth arrest-specific 7	0.042888	
chr3	141859597	141859698	reg1026813.p1	5.151	+	BC002405 AK303634 U18422 BC007976 AK303181 TSC_hg19_v1_chr3_-_141747469 NM_001178141 NM_001178142 NM_006286	-112177	-	AL080206 NM_001178140	-140439	-	TSC_hg19_v1_chr3_+_141595539 U51478 CU680074	-264070	+	TSC_hg19_v1_chr3_-_141868338 AK314786 BC013993 U35117 NM_001178138 NM_001178139	8677	-	DQ891607 DQ894800 TSC_hg19_v1_chr3_-_141944428 AK313792 BX648681 BC032470 AK127641 BX648359 AK310761	84718	-	TSC_hg19_v1_chr3_-_141944444 NM_001039547	84807	-	AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AL080206|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178140|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U51478|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK314786|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC013993|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U35117|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178138|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178139|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##DQ891607|GK5|256356|glycerol kinase 5 (putative)##DQ894800|GK5|256356|glycerol kinase 5 (putative)##AK313792|GK5|256356|glycerol kinase 5 (putative)##BX648681|GK5|256356|glycerol kinase 5 (putative)##BC032470|GK5|256356|glycerol kinase 5 (putative)##AK127641|GK5|256356|glycerol kinase 5 (putative)##BX648359|GK5|256356|glycerol kinase 5 (putative)##AK310761|GK5|256356|glycerol kinase 5 (putative)##NM_001039547|GK5|256356|glycerol kinase 5 (putative)	0.978035	CTCF.p2:-2:0.978
chr6	106787334	106787449	reg1024752.p1	5.151	+	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	-13728	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	-13859	-	BC002699 TSC_hg19_v1_chr6_-_106773313	-14083	-	AK056705 NM_001624	172338	+	TSC_hg19_v1_chr6_+_106960443 U83115	173020	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	289889	-	CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK056705|AIM1|202|absent in melanoma 1##NM_001624|AIM1|202|absent in melanoma 1##U83115|AIM1|202|absent in melanoma 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1	0.881991	CTCF.p2:2:0.882
chr6	166303718	166303837	reg1026793.p1	5.151	+	AY203946 TSC_hg19_v1_chr6_-_166076051	-227725	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	-228081	-	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	-580685	-	TSC_hg19_v1_chr6_-_166401424 AK289375	97656	-	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	97757	-	BC098425 NM_003181	278352	-	AY203946|LOC100132188|100132188|LP7097##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AK289375|LINC00473|90632|long intergenic non-protein coding RNA 473##BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)	0.949227	CTCF.p2:-19:0.949
chr11	70311613	70311686	reg1033697.p2	5.150	+	TSC_hg19_v1_chr11_+_70244653 NM_001184740 NM_005231 NM_138565 AK222613 AK291097 BC033889 BC008799 M98343	-66996	+	TSC_hg19_v1_chr11_-_70244476 AK125463	-67134	-	D49354 TSC_hg19_v1_chr11_+_70194450	-117228	+	AF141901 BC114484 BC113876 TSC_hg19_v1_chr11_-_70507895	196218	-	TSC_hg19_v1_chr11_-_70507919 AB208027 NM_133266	196269	-	BC093885 BC112097 BC143389 TSC_hg19_v1_chr11_-_70507947	196301	-	NM_001184740|CTTN|2017|cortactin##NM_005231|CTTN|2017|cortactin##NM_138565|CTTN|2017|cortactin##AK222613|CTTN|2017|cortactin##AK291097|CTTN|2017|cortactin##BC033889|CTTN|2017|cortactin##BC008799|CTTN|2017|cortactin##M98343|CTTN|2017|cortactin##D49354|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##AF141901|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC114484|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC113876|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AB208027|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##NM_133266|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC093885|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC112097|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC143389|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2	0.0	
chr1	237900076	237900181	reg1027103.p2	5.150	+	NM_001035 X98330 Y08218	-694355	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-941293	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	-941551	+	AK314151 NM_021186	154093	-	TSC_hg19_v1_chr1_+_239550016 AK056349	1649814	+	AF279779 NM_000740	1892244	+	NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3	0.0	
chr13	90577449	90577565	reg1025092.p1	5.150	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-2252638	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-4204068	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-6121007	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	1473397	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	3301920	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	4554319	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.135972	
chr19	7198336	7198464	reg1019783.p4	5.150	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-98849	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-128685	+	AK315405 NM_001044387 NM_001044388 NM_024341	-128938	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	95560	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	261607	+	TSC_hg19_v1_chr19_+_7460061 AB011093	261677	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr22	27802011	27802112	reg1026738.p1	5.150	+	TSC_hg19_v1_chr22_+_27068725 AK026502	-733321	+	TSC_hg19_v1_chr22_+_27053392 AB263414 AB263415 AB263416 AB263417 AK098833	-748589	+	BC069404 CR456424 NM_001886 U59057 AB528112 CU012985 CU013273 BC096171 BC096172 BC096173 BC096174	-784130	+	TSC_hg19_v1_chr22_-_28197481 NM_002430 X82209	395416	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	513113	-	TSC_hg19_v1_chr22_-_28315203 BC031427	513146	-	AK026502|LOC100507637|100507637|uncharacterized LOC100507637##AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##BC069404|CRYBA4|1413|crystallin, beta A4##CR456424|CRYBA4|1413|crystallin, beta A4##NM_001886|CRYBA4|1413|crystallin, beta A4##U59057|CRYBA4|1413|crystallin, beta A4##CU012985|CRYBA4|1413|crystallin, beta A4##CU013273|CRYBA4|1413|crystallin, beta A4##BC096171|CRYBA4|1413|crystallin, beta A4##BC096172|CRYBA4|1413|crystallin, beta A4##BC096173|CRYBA4|1413|crystallin, beta A4##BC096174|CRYBA4|1413|crystallin, beta A4##NM_002430|MN1|4330|meningioma (disrupted in balanced translocation) 1##X82209|MN1|4330|meningioma (disrupted in balanced translocation) 1##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta	0.993002	CTCF.p2:-11:0.993
chr9	131174791	131174909	reg1023457.p1	5.150	+	TSC_hg19_v1_chr9_+_131133650 BC003581 AK001880 AK097029 AK300877 BC011620	-41194	+	NM_001135947 NM_030914 TSC_hg19_v1_chr9_+_131133630	-41236	+	BC009959 TSC_hg19_v1_chr9_+_131102955 AK314681	-71883	+	TSC_hg19_v1_chr9_+_131182704 NM_016174	7874	+	AK297929 TSC_hg19_v1_chr9_+_131183135 BC108698 BC098432	8320	+	TSC_hg19_v1_chr9_+_131183225 BC119698 BC119699	8405	+	BC003581|URM1|81605|ubiquitin related modifier 1##AK001880|URM1|81605|ubiquitin related modifier 1##AK097029|URM1|81605|ubiquitin related modifier 1##AK300877|URM1|81605|ubiquitin related modifier 1##BC011620|URM1|81605|ubiquitin related modifier 1##NM_001135947|URM1|81605|ubiquitin related modifier 1##NM_030914|URM1|81605|ubiquitin related modifier 1##BC009959|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##AK314681|SLC27A4|10999|solute carrier family 27 (fatty acid transporter), member 4##NM_016174|CERCAM|51148|cerebral endothelial cell adhesion molecule##AK297929|CERCAM|51148|cerebral endothelial cell adhesion molecule##BC108698|CERCAM|51148|cerebral endothelial cell adhesion molecule##BC098432|CERCAM|51148|cerebral endothelial cell adhesion molecule##BC119698|CERCAM|51148|cerebral endothelial cell adhesion molecule##BC119699|CERCAM|51148|cerebral endothelial cell adhesion molecule	0.468557	CTCF.p2:100:0.300
chrX	138208799	138208918	reg1028015.p1	5.150	+	NM_001139502	-259142	-	AF100144 NM_033642	-387344	-	BC012347 NM_004114 TSC_hg19_v1_chrX_-_137793839	-415021	-	AF108756 AK316170 TSC_hg19_v1_chrX_-_138286506	77612	-	AF199613 TSC_hg19_v1_chrX_-_138287166	78301	-	TSC_hg19_v1_chrX_-_138287186 AK303685 NM_001139498 NM_001139500 NM_001139501 AK297545	78339	-	NM_001139502|FGF13|2258|fibroblast growth factor 13##AF100144|FGF13|2258|fibroblast growth factor 13##NM_033642|FGF13|2258|fibroblast growth factor 13##BC012347|FGF13|2258|fibroblast growth factor 13##NM_004114|FGF13|2258|fibroblast growth factor 13##AF108756|FGF13|2258|fibroblast growth factor 13##AK316170|FGF13|2258|fibroblast growth factor 13##AF199613|FGF13|2258|fibroblast growth factor 13##AK303685|FGF13|2258|fibroblast growth factor 13##NM_001139498|FGF13|2258|fibroblast growth factor 13##NM_001139500|FGF13|2258|fibroblast growth factor 13##NM_001139501|FGF13|2258|fibroblast growth factor 13##AK297545|FGF13|2258|fibroblast growth factor 13	0.952438	CTCF.p2:-10:0.952
chr10	63663443	63663543	reg1023738.p2	5.149	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-2062	+	NM_032199	-2481	+	BC041932 NM_173554	-240775	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	145603	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	365046	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	470550	+	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365	0.0	
chr18	55297554	55297684	reg1023609.p2	5.149	+	NM_001242804 BC040476	-62	+	TSC_hg19_v1_chr18_-_55289034 AK293985 NM_004539	-8518	-	TSC_hg19_v1_chr18_-_55289015 AK297777 BC001687 AK222835 AK294364	-8600	-	TSC_hg19_v1_chr18_-_55470548 NM_005603	172851	-	TSC_hg19_v1_chr18_+_55711515 NM_001144967 NM_001243960 NM_015277	413917	+	TSC_hg19_v1_chr18_+_55711771 AB071179	414165	+	NM_001242804|LOC100505549|100505549|uncharacterized LOC100505549##BC040476|LOC100505549|100505549|uncharacterized LOC100505549##AK293985|NARS|4677|asparaginyl-tRNA synthetase##NM_004539|NARS|4677|asparaginyl-tRNA synthetase##AK297777|NARS|4677|asparaginyl-tRNA synthetase##BC001687|NARS|4677|asparaginyl-tRNA synthetase##AK222835|NARS|4677|asparaginyl-tRNA synthetase##AK294364|NARS|4677|asparaginyl-tRNA synthetase##NM_005603|ATP8B1|5205|ATPase, aminophospholipid transporter, class I, type 8B, member 1##NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001243960|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB071179|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.0	
chr2	65244662	65244781	reg1030043.p1	5.149	+	TSC_hg19_v1_chr2_+_65216532 AK223486 AK313052 BC072423 BC026216 L14595 L19444 AB026689 DQ891127 DQ894306	-28071	+	TSC_hg19_v1_chr2_+_65216485 AK298472 AK315986 NM_003038	-28230	+	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	-29121	+	TSC_hg19_v1_chr2_+_65283579 AB011154 NM_015147 AK093846 AK000856 AK299373 AK304110 AK301173 AK098786 BX648774 BC030534 BC002982 BC004873	38839	+	AF498929 BT019528 BT019529 CR533479 CR536488 AB464118 AB590355 AM392684 CU674450 DQ894084 EU831590 EU831675 TSC_hg19_v1_chr2_-_65357083 M28209	112354	-	TSC_hg19_v1_chr2_-_65357236 BC000905 BX571747 AL050268 AK303678 AK055927 AK315495	112498	-	AK223486|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK313052|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC072423|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC026216|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L14595|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L19444|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AB026689|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ891127|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ894306|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AB011154|CEP68|23177|centrosomal protein 68kDa##NM_015147|CEP68|23177|centrosomal protein 68kDa##AK093846|CEP68|23177|centrosomal protein 68kDa##AK000856|CEP68|23177|centrosomal protein 68kDa##AK299373|CEP68|23177|centrosomal protein 68kDa##AK304110|CEP68|23177|centrosomal protein 68kDa##AK301173|CEP68|23177|centrosomal protein 68kDa##AK098786|CEP68|23177|centrosomal protein 68kDa##BX648774|CEP68|23177|centrosomal protein 68kDa##BC030534|CEP68|23177|centrosomal protein 68kDa##BC002982|CEP68|23177|centrosomal protein 68kDa##BC004873|CEP68|23177|centrosomal protein 68kDa##AF498929|RAB1A|5861|RAB1A, member RAS oncogene family##BT019528|RAB1A|5861|RAB1A, member RAS oncogene family##BT019529|RAB1A|5861|RAB1A, member RAS oncogene family##CR533479|RAB1A|5861|RAB1A, member RAS oncogene family##CR536488|RAB1A|5861|RAB1A, member RAS oncogene family##AM392684|RAB1A|5861|RAB1A, member RAS oncogene family##DQ894084|RAB1A|5861|RAB1A, member RAS oncogene family##EU831590|RAB1A|5861|RAB1A, member RAS oncogene family##EU831675|RAB1A|5861|RAB1A, member RAS oncogene family##M28209|RAB1A|5861|RAB1A, member RAS oncogene family##BC000905|RAB1A|5861|RAB1A, member RAS oncogene family##BX571747|RAB1A|5861|RAB1A, member RAS oncogene family##AL050268|RAB1A|5861|RAB1A, member RAS oncogene family##AK303678|RAB1A|5861|RAB1A, member RAS oncogene family##AK055927|RAB1A|5861|RAB1A, member RAS oncogene family##AK315495|RAB1A|5861|RAB1A, member RAS oncogene family	0.0	
chr6	82175715	82175838	reg1028387.p1	5.149	+	TSC_hg19_v1_chr6_+_80816397 AK289977 BC040139 M55575 AB529112 BT020063 X52446	-1359339	+	TSC_hg19_v1_chr6_+_80816387 AK316545 BC034481	-1359393	+	TSC_hg19_v1_chr6_+_80816367 NM_000056 NM_183050 AK304353 U50708	-1359449	+	AY740520 FJ211061 CU674334 CU675631 TSC_hg19_v1_chr6_-_82461975	286145	-	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	286635	-	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	781637	-	AK289977|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC040139|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##M55575|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BT020063|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##X52446|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK316545|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC034481|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##NM_000056|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##NM_183050|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK304353|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##U50708|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AY740520|FAM46A|55603|family with sequence similarity 46, member A##AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase	0.997261	CTCF.p2:-9:0.997
chr8	11754583	11754764	reg1020475.p1	5.149	+	TSC_hg19_v1_chr8_-_11725628 NM_001908 NM_147780 NM_147781 NM_147782 NM_147783	-28975	-	TSC_hg19_v1_chr8_-_11725624 AK075393	-29049	-	AK092070 AK130184 AK290239 AK297687 BC095408 TSC_hg19_v1_chr8_-_11725597 AK296845 BX647952	-29076	-	AY621333 DQ012026 NM_001033018	77434	-	AY621332 DQ012025 NM_001033017	85156	+	AY621331 DQ012024 NM_001033019 BC130461 BC130463	99116	-	NM_001908|CTSB|1508|cathepsin B##NM_147780|CTSB|1508|cathepsin B##NM_147781|CTSB|1508|cathepsin B##NM_147782|CTSB|1508|cathepsin B##NM_147783|CTSB|1508|cathepsin B##AK075393|CTSB|1508|cathepsin B##AK092070|CTSB|1508|cathepsin B##AK130184|CTSB|1508|cathepsin B##AK290239|CTSB|1508|cathepsin B##AK297687|CTSB|1508|cathepsin B##BC095408|CTSB|1508|cathepsin B##AK296845|CTSB|1508|cathepsin B##BX647952|CTSB|1508|cathepsin B##AY621333|DEFB136|613210|defensin, beta 136##DQ012026|DEFB136|613210|defensin, beta 136##NM_001033018|DEFB136|613210|defensin, beta 136##AY621332|DEFB135|613209|defensin, beta 135##DQ012025|DEFB135|613209|defensin, beta 135##NM_001033017|DEFB135|613209|defensin, beta 135##AY621331|DEFB134|613211|defensin, beta 134##DQ012024|DEFB134|613211|defensin, beta 134##NM_001033019|DEFB134|613211|defensin, beta 134##BC130461|DEFB134|613211|defensin, beta 134##BC130463|DEFB134|613211|defensin, beta 134	0.0	
chr9	134150863	134150981	reg1027170.p2	5.149	+	TSC_hg19_v1_chr9_+_134001016 D14689 AB159230	-149872	+	TSC_hg19_v1_chr9_+_134000975 BC105998 AK307573 NM_005085 AL832609 X64228 BC045620 BC012500	-149948	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	-178964	+	BC049388 NM_033387 AK095423	997	-	TSC_hg19_v1_chr9_+_134165108 AK075207 NM_032728 BC006362 AK027568 AK315502 AB385550	14306	+	TSC_hg19_v1_chr9_+_134269515 BC002872	118644	+	D14689|NUP214|8021|nucleoporin 214kDa##AB159230|NUP214|8021|nucleoporin 214kDa##BC105998|NUP214|8021|nucleoporin 214kDa##AK307573|NUP214|8021|nucleoporin 214kDa##NM_005085|NUP214|8021|nucleoporin 214kDa##AL832609|NUP214|8021|nucleoporin 214kDa##X64228|NUP214|8021|nucleoporin 214kDa##BC045620|NUP214|8021|nucleoporin 214kDa##BC012500|NUP214|8021|nucleoporin 214kDa##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like##BC049388|FAM78A|286336|family with sequence similarity 78, member A##NM_033387|FAM78A|286336|family with sequence similarity 78, member A##AK095423|FAM78A|286336|family with sequence similarity 78, member A##AK075207|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##NM_032728|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC006362|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK027568|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK315502|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC002872|PRRC2B|84726|proline-rich coiled-coil 2B	0.318806	CTCF.p2:-24:0.319
chrY	1590508	1590683	reg1028335.p1	5.149	+	AK301844 NM_001173473	-67944	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-68794	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-129626	-	BC043610 GQ280263 NM_178129 AK126147	15443	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	69934	+	NM_004043 U11090	73752	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr10	11752629	11752796	reg1018618.p1	5.148	+	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	-99076	-	NM_001080491	-178439	-	TSC_hg19_v1_chr10_+_11207490 AK295511	-545220	+	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	31686	+	TSC_hg19_v1_chr10_+_11865354 BC017269 BC048800 NM_153256	112646	+	AK056703 TSC_hg19_v1_chr10_-_11936707	183990	-	AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK295511|CELF2|10659|CUGBP, Elav-like family member 2##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC017269|C10orf47|254427|chromosome 10 open reading frame 47##BC048800|C10orf47|254427|chromosome 10 open reading frame 47##NM_153256|C10orf47|254427|chromosome 10 open reading frame 47##AK056703|LOC219731|219731|uncharacterized LOC219731	0.0	
chr12	117557337	117557517	reg1001030.p1	5.148	+	DQ894644 TSC_hg19_v1_chr12_-_117537222 AF443207 BC015221 NM_001168325 NM_017899 AK000614	-20164	-	TSC_hg19_v1_chr12_+_117348781 BC037296 NM_012174 NM_153348 AK289621 AF176707 BC075823	-208641	+	NM_003806 U76376	-238196	-	AL136899 TSC_hg19_v1_chr12_-_117628277 BC091496 AF174601 AB020682 AK001699 AK314573 BC034045 BC042333 AK308141 NM_015002 NM_033624	70798	-	NM_001204213	185429	-	NM_001204214	189787	-	DQ894644|TESC|54997|tescalcin##AF443207|TESC|54997|tescalcin##BC015221|TESC|54997|tescalcin##NM_001168325|TESC|54997|tescalcin##NM_017899|TESC|54997|tescalcin##AK000614|TESC|54997|tescalcin##BC037296|FBXW8|26259|F-box and WD repeat domain containing 8##NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8##NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8##AK289621|FBXW8|26259|F-box and WD repeat domain containing 8##AF176707|FBXW8|26259|F-box and WD repeat domain containing 8##NM_003806|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##U76376|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##AL136899|FBXO21|23014|F-box protein 21##BC091496|FBXO21|23014|F-box protein 21##AF174601|FBXO21|23014|F-box protein 21##AB020682|FBXO21|23014|F-box protein 21##AK001699|FBXO21|23014|F-box protein 21##AK314573|FBXO21|23014|F-box protein 21##BC034045|FBXO21|23014|F-box protein 21##BC042333|FBXO21|23014|F-box protein 21##AK308141|FBXO21|23014|F-box protein 21##NM_015002|FBXO21|23014|F-box protein 21##NM_033624|FBXO21|23014|F-box protein 21##NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204214|NOS1|4842|nitric oxide synthase 1 (neuronal)	0.0	
chr2	224324215	224324313	reg1029080.p1	5.148	+	NM_080671 TSC_hg19_v1_chr2_+_223916907 DQ192293 AK313203 BC014429 AY065987	-407367	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	-598517	+	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	-787855	+	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	142802	-	TSC_hg19_v1_chr2_-_224467100 BC022509	142843	-	TSC_hg19_v1_chr2_-_224467145 NM_003469	142915	-	NM_080671|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##DQ192293|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AK313203|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##BC014429|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AY065987|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II##BC022509|SCG2|7857|secretogranin II##NM_003469|SCG2|7857|secretogranin II	1.009122	CTCF.p2:-8:0.995
chr2	99163879	99163948	reg1035287.p2	5.148	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-102555	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-201008	+	DQ426863 NM_001079878 NM_001298 DQ067460	-201280	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	61029	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	61137	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	61157	+	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)	0.0	
chr3	19106653	19106804	reg1028822.p2	5.148	+	BC001744 NM_001131010	-626495	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	-639931	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-1322561	-	AK295633 AY053503 NM_144633 AB209053 AK309034	83276	+	BC028198 AK097644 NM_144715	868960	-	TSC_hg19_v1_chr3_+_19988586 NM_004162	881961	+	BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##BC028198|EFHB|151651|EF-hand domain family, member B##AK097644|EFHB|151651|EF-hand domain family, member B##NM_144715|EFHB|151651|EF-hand domain family, member B##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family	0.164512	
chr3	33294345	33294447	reg1026387.p2	5.148	+	AB011099 NM_015551	-33690	-	TSC_hg19_v1_chr3_+_33155562 AJ006470 CU679079 DQ893221 DQ896550	-138823	+	TSC_hg19_v1_chr3_+_33155553 NM_006371 AK314719 AK298250 AK075401 AK126433 AK001634 AK091772 BC008745 AK097650 AK092990	-138896	+	TSC_hg19_v1_chr3_+_33318965 AK001271 NM_012157 AK302218 NM_001171713 AK303764 AK299665 AK294209 AF174589 AK316229 AK001438 AK298967 AK297534 AF186273 BC031556	24554	+	AK023274 AF198487 TSC_hg19_v1_chr3_-_33481564	187140	-	TSC_hg19_v1_chr3_-_33481868 BC047235 NM_001128160 NM_014517	187469	-	AB011099|SUSD5|26032|sushi domain containing 5##NM_015551|SUSD5|26032|sushi domain containing 5##AJ006470|CRTAP|10491|cartilage associated protein##DQ893221|CRTAP|10491|cartilage associated protein##DQ896550|CRTAP|10491|cartilage associated protein##NM_006371|CRTAP|10491|cartilage associated protein##AK314719|CRTAP|10491|cartilage associated protein##AK298250|CRTAP|10491|cartilage associated protein##AK075401|CRTAP|10491|cartilage associated protein##AK126433|CRTAP|10491|cartilage associated protein##AK001634|CRTAP|10491|cartilage associated protein##AK091772|CRTAP|10491|cartilage associated protein##BC008745|CRTAP|10491|cartilage associated protein##AK097650|CRTAP|10491|cartilage associated protein##AK092990|CRTAP|10491|cartilage associated protein##AK001271|FBXL2|25827|F-box and leucine-rich repeat protein 2##NM_012157|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK302218|FBXL2|25827|F-box and leucine-rich repeat protein 2##NM_001171713|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK303764|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK299665|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK294209|FBXL2|25827|F-box and leucine-rich repeat protein 2##AF174589|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK316229|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK001438|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK298967|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK297534|FBXL2|25827|F-box and leucine-rich repeat protein 2##AF186273|FBXL2|25827|F-box and leucine-rich repeat protein 2##BC031556|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK023274|UBP1|7342|upstream binding protein 1 (LBP-1a)##AF198487|UBP1|7342|upstream binding protein 1 (LBP-1a)##BC047235|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_001128160|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_014517|UBP1|7342|upstream binding protein 1 (LBP-1a)	0.0	
chr4	179196970	179197068	reg1027090.p1	5.148	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-833376	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-833426	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-833478	-	TSC_hg19_v1_chr4_+_183065111 AK308489	3868106	+	NM_001080477 HE578284 HE578285	4048135	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	4641511	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.333912	CTCF.p2:10:0.334
chr7	120460070	120460204	reg1026055.p1	5.148	+	AK307139 AB028967 NM_012281	-546433	+	NM_019644 AK302407	-2595403	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-2635966	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	37883	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	38023	-	AK000096 NM_019071 NM_198267 TSC_hg19_v1_chr7_+_120590832 AF161419 BC009777 BC093091 AY007790 AK291905 AF074968 BC073865 AF180298 BC062634 BC093689 BC101609 BC143316 BC009776 BC010851 BC146417 BC153171 AB463778	130744	+	AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12##AK000096|ING3|54556|inhibitor of growth family, member 3##NM_019071|ING3|54556|inhibitor of growth family, member 3##NM_198267|ING3|54556|inhibitor of growth family, member 3##AF161419|ING3|54556|inhibitor of growth family, member 3##BC009777|ING3|54556|inhibitor of growth family, member 3##BC093091|ING3|54556|inhibitor of growth family, member 3##AY007790|ING3|54556|inhibitor of growth family, member 3##AK291905|ING3|54556|inhibitor of growth family, member 3##AF074968|ING3|54556|inhibitor of growth family, member 3##BC073865|ING3|54556|inhibitor of growth family, member 3##AF180298|ING3|54556|inhibitor of growth family, member 3##BC062634|ING3|54556|inhibitor of growth family, member 3##BC093689|ING3|54556|inhibitor of growth family, member 3##BC101609|ING3|54556|inhibitor of growth family, member 3##BC143316|ING3|54556|inhibitor of growth family, member 3##BC009776|ING3|54556|inhibitor of growth family, member 3##BC010851|ING3|54556|inhibitor of growth family, member 3##BC146417|ING3|54556|inhibitor of growth family, member 3##BC153171|ING3|54556|inhibitor of growth family, member 3	0.207506	CTCF.p2:-22:0.208
chr8	68402549	68402642	reg1003654.p1	5.148	+	BC030256 TSC_hg19_v1_chr8_+_68256207	-146440	+	NM_006421 TSC_hg19_v1_chr8_-_68256017	-146630	-	TSC_hg19_v1_chr8_+_67976626 AM156947 BX649147 NM_024790 BC029445 AK096205 AB527449 AK127108	-425959	+	AF221594 AY044833 BC033684 NM_020361	256003	-	TSC_hg19_v1_chr8_+_68864347 BC068571 BC036055 AJ437636	461757	+	TSC_hg19_v1_chr8_+_68864598 AY508996 AY508997 NM_024870 NM_025170	462000	+	NM_006421|ARFGEF1|10565|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)##AM156947|CSPP1|79848|centrosome and spindle pole associated protein 1##BX649147|CSPP1|79848|centrosome and spindle pole associated protein 1##NM_024790|CSPP1|79848|centrosome and spindle pole associated protein 1##BC029445|CSPP1|79848|centrosome and spindle pole associated protein 1##AK096205|CSPP1|79848|centrosome and spindle pole associated protein 1##AK127108|CSPP1|79848|centrosome and spindle pole associated protein 1##AF221594|CPA6|57094|carboxypeptidase A6##AY044833|CPA6|57094|carboxypeptidase A6##BC033684|CPA6|57094|carboxypeptidase A6##NM_020361|CPA6|57094|carboxypeptidase A6##AJ437636|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY508996|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY508997|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##NM_024870|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##NM_025170|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	0.0	
chrX	47503465	47503602	reg1021297.p1	5.148	+	NM_002621	-13830	-	AB590250 CU677429 DQ893460 DQ896310 TSC_hg19_v1_chrX_-_47489295 AK122955 BC015756 X57748 M83652 AK310695 NM_001145252	-14228	-	TSC_hg19_v1_chrX_-_47479257 BC048799 NM_006950 NM_133499	-24263	-	BC048296 AB016193 TSC_hg19_v1_chrX_-_47509984 AK312984 AF000672 M25269	6394	-	TSC_hg19_v1_chrX_-_47510001 NM_001114123 NM_005229	6475	-	TSC_hg19_v1_chrX_-_47518534 AF083242 AK223320	14978	-	NM_002621|CFP|5199|complement factor properdin##DQ893460|CFP|5199|complement factor properdin##DQ896310|CFP|5199|complement factor properdin##AK122955|CFP|5199|complement factor properdin##BC015756|CFP|5199|complement factor properdin##X57748|CFP|5199|complement factor properdin##M83652|CFP|5199|complement factor properdin##AK310695|CFP|5199|complement factor properdin##NM_001145252|CFP|5199|complement factor properdin##BC048799|SYN1|6853|synapsin I##NM_006950|SYN1|6853|synapsin I##NM_133499|SYN1|6853|synapsin I##BC048296|ELK1|2002|ELK1, member of ETS oncogene family##AB016193|ELK1|2002|ELK1, member of ETS oncogene family##AK312984|ELK1|2002|ELK1, member of ETS oncogene family##AF000672|ELK1|2002|ELK1, member of ETS oncogene family##M25269|ELK1|2002|ELK1, member of ETS oncogene family##NM_001114123|ELK1|2002|ELK1, member of ETS oncogene family##NM_005229|ELK1|2002|ELK1, member of ETS oncogene family##AF083242|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AK223320|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone	0.733249	CTCF.p2:16:0.733
chr18	3594168	3594265	reg1012630.p1	5.147	+	TSC_hg19_v1_chr18_+_3594077 AK093095 AX747919 BC137437	-74	+	NM_173211	-140445	+	TSC_hg19_v1_chr18_+_3451599 NM_170695 NM_173210 AK307230 BC031268	-142585	+	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	251114	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	280068	-	AK294777 AK294717 NM_001242762 NM_001242763	280511	-	AK093095|FLJ35776|649446|uncharacterized LOC649446##BC137437|FLJ35776|649446|uncharacterized LOC649446##NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1##NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1##BC031268|TGIF1|7050|TGFB-induced factor homeobox 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	0.0	
chr19	36282096	36282202	reg1026130.p1	5.147	+	TSC_hg19_v1_chr19_+_36266477 AK127255 NM_001172630 NM_052948 AK096338 BC128586	-15703	+	NM_001039887 TSC_hg19_v1_chr19_+_36249072 AL833894 AK055219 BC017947 AK124144 BC110893	-33072	+	BC068046 AK297852 TSC_hg19_v1_chr19_-_36247931 AK056951 AK300695 NM_144617	-34218	-	BC039710 TSC_hg19_v1_chr19_-_36303748	21587	-	TSC_hg19_v1_chr19_-_36303772 BC038853	21622	-	NM_021232 U80018	22051	-	AK127255|ARHGAP33|115703|Rho GTPase activating protein 33##NM_001172630|ARHGAP33|115703|Rho GTPase activating protein 33##NM_052948|ARHGAP33|115703|Rho GTPase activating protein 33##AK096338|ARHGAP33|115703|Rho GTPase activating protein 33##BC128586|ARHGAP33|115703|Rho GTPase activating protein 33##NM_001039887|C19orf55|148137|chromosome 19 open reading frame 55##AL833894|C19orf55|148137|chromosome 19 open reading frame 55##AK055219|C19orf55|148137|chromosome 19 open reading frame 55##BC017947|C19orf55|148137|chromosome 19 open reading frame 55##AK124144|C19orf55|148137|chromosome 19 open reading frame 55##BC110893|C19orf55|148137|chromosome 19 open reading frame 55##BC068046|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6##AK297852|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6##AK056951|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6##NM_144617|HSPB6|126393|heat shock protein, alpha-crystallin-related, B6##BC039710|PRODH2|58510|proline dehydrogenase (oxidase) 2##BC038853|PRODH2|58510|proline dehydrogenase (oxidase) 2##NM_021232|PRODH2|58510|proline dehydrogenase (oxidase) 2##U80018|PRODH2|58510|proline dehydrogenase (oxidase) 2	0.783612	CTCF.p2:2:0.784
chr2	46005728	46005849	reg1008990.p1	5.147	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-126714	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-167381	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-210660	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	518803	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	519187	+	NM_001145051	700915	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.0	
chr2	96840206	96840314	reg1000292.p1	5.147	+	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	-29101	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	-29306	-	BC107126 AJ537600 BC107127 NM_001002036	-36087	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	33795	-	TSC_hg19_v1_chr2_+_96874144 AK311432	33894	+	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	34274	-	BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.0	
chr4	121898869	121898962	reg1028366.p2	5.147	+	TSC_hg19_v1_chr4_-_121843992 AB464059 BC121037 BC121038 AK314293 AK310958 AF272897 AK056352 NM_018699 BC066942	-54920	-	EU831987 EU832080 AB528692 AF394735 TSC_hg19_v1_chr4_-_120987954 U65410 BC070283 AJ000186 BC005945 BC000356 U31278 AK223433 AK313827 AK298228 NM_002358	-910961	-	D89094 TSC_hg19_v1_chr4_-_120550167	-1348753	-	BC019351 AK289615 NM_024574 TSC_hg19_v1_chr4_-_121993690	94715	-	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	186569	-	AK301058 NM_001128843	238866	-	BC121037|PRDM5|11107|PR domain containing 5##BC121038|PRDM5|11107|PR domain containing 5##AK314293|PRDM5|11107|PR domain containing 5##AK310958|PRDM5|11107|PR domain containing 5##AF272897|PRDM5|11107|PR domain containing 5##AK056352|PRDM5|11107|PR domain containing 5##NM_018699|PRDM5|11107|PR domain containing 5##BC066942|PRDM5|11107|PR domain containing 5##EU831987|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##EU832080|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF394735|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC070283|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AJ000186|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC005945|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC000356|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK223433|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK313827|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK298228|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##NM_002358|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC019351|NDNF|79625|neuron-derived neurotrophic factor##AK289615|NDNF|79625|neuron-derived neurotrophic factor##NM_024574|NDNF|79625|neuron-derived neurotrophic factor##AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3##AK301058|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3	0.137425	
chr6_mann_hap4	1913308	1913429	reg1030949.p1	5.147	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.147186	
chr12	25710889	25711040	reg1028920.p2	5.146	+	AK093323 AX748055 NM_152590 BC037957 AK310411 AK302292 NM_001145728 NM_001145729	-4768	-	TSC_hg19_v1_chr12_-_25403864 AK292510 NM_004985 NM_033360 BC029545 M54968	-307023	-	TSC_hg19_v1_chr12_-_25403822 BC013572	-307149	-	AK296816 NM_001145727	90523	-	TSC_hg19_v1_chr12_+_26111964 NM_001164748 NM_007211 BC030021 AB093206 AY665468 AY665469 AY665470 AY665471	401037	+	AK290055 NM_001164747	415723	+	AK093323|IFLTD1|160492|intermediate filament tail domain containing 1##NM_152590|IFLTD1|160492|intermediate filament tail domain containing 1##BC037957|IFLTD1|160492|intermediate filament tail domain containing 1##AK310411|IFLTD1|160492|intermediate filament tail domain containing 1##AK302292|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145728|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145729|IFLTD1|160492|intermediate filament tail domain containing 1##AK292510|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##NM_004985|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##NM_033360|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC029545|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##M54968|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC013572|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##AK296816|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145727|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001164748|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_007211|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##BC030021|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AB093206|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665468|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665469|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665470|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665471|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AK290055|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_001164747|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	0.0	
chr15	102195624	102195804	reg1022708.p2	5.146	+	TSC_hg19_v1_chr15_-_102192580 BC006150 BC008873 AF353992 AK315584 AK297048 AK026257 AK296553 NM_025141 NM_078474	-3248	-	TSC_hg19_v1_chr15_-_102030140 NM_002570 NM_138319 NM_138320 NM_138321 NM_138322 NM_138323 NM_138324 NM_138325	-165552	-	TSC_hg19_v1_chr15_-_102029995 M80482 M80482	-165681	-	TSC_hg19_v1_chr15_-_102264638 BC132671 BC136315 BC143943 AK056653 AX721055 NM_152334	68941	-	BC137002 BC137003 NM_001005326	150197	+	BC137064 BC137065 NM_001001674	162663	+	BC006150|TM2D3|80213|TM2 domain containing 3##BC008873|TM2D3|80213|TM2 domain containing 3##AF353992|TM2D3|80213|TM2 domain containing 3##AK315584|TM2D3|80213|TM2 domain containing 3##AK297048|TM2D3|80213|TM2 domain containing 3##AK026257|TM2D3|80213|TM2 domain containing 3##AK296553|TM2D3|80213|TM2 domain containing 3##NM_025141|TM2D3|80213|TM2 domain containing 3##NM_078474|TM2D3|80213|TM2 domain containing 3##NM_002570|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138319|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138320|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138321|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138322|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138323|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138324|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138325|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##BC132671|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC136315|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC143943|TARSL2|123283|threonyl-tRNA synthetase-like 2##AK056653|TARSL2|123283|threonyl-tRNA synthetase-like 2##NM_152334|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137064|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##BC137065|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##NM_001001674|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15	0.020025	
chr17	37080328	37080416	reg1019896.p1	5.146	+	TSC_hg19_v1_chr17_+_37026351 X82456 BC012460 DQ891539 DQ894728 AB463833 CU675705 AK289847	-53976	+	TSC_hg19_v1_chr17_+_37026313 AK295522 AK296092 AK309933 BC007560	-54058	+	AK307868 TSC_hg19_v1_chr17_+_37026294 AK294704	-54091	+	BC140879 BC140880 NM_001008777 AY700575	43267	-	EU832116 EU832210 AK312999 TSC_hg19_v1_chr17_-_37307740 AF279144 AF378753 AY704670 AY704671	227360	-	TSC_hg19_v1_chr17_-_37307863 BC036059	227475	-	X82456|LASP1|3927|LIM and SH3 protein 1##BC012460|LASP1|3927|LIM and SH3 protein 1##DQ891539|LASP1|3927|LIM and SH3 protein 1##DQ894728|LASP1|3927|LIM and SH3 protein 1##AK289847|LASP1|3927|LIM and SH3 protein 1##AK295522|LASP1|3927|LIM and SH3 protein 1##AK296092|LASP1|3927|LIM and SH3 protein 1##AK309933|LASP1|3927|LIM and SH3 protein 1##BC007560|LASP1|3927|LIM and SH3 protein 1##AK307868|LASP1|3927|LIM and SH3 protein 1##BC140879|FBXO47|494188|F-box protein 47##BC140880|FBXO47|494188|F-box protein 47##NM_001008777|FBXO47|494188|F-box protein 47##AY700575|FBXO47|494188|F-box protein 47##EU832116|PLXDC1|57125|plexin domain containing 1##EU832210|PLXDC1|57125|plexin domain containing 1##AK312999|PLXDC1|57125|plexin domain containing 1##AF279144|PLXDC1|57125|plexin domain containing 1##AF378753|PLXDC1|57125|plexin domain containing 1##AY704670|PLXDC1|57125|plexin domain containing 1##AY704671|PLXDC1|57125|plexin domain containing 1##BC036059|PLXDC1|57125|plexin domain containing 1	0.239473	CTCF.p2:10:0.217
chr2	101869032	101869103	reg1024317.p3	5.146	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	-101284	-	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	-250345	+	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	-432301	+	TSC_hg19_v1_chr2_+_101869347 NM_017546	270	+	TSC_hg19_v1_chr2_+_101869378 AF103798 BC064421 BC018664	325	+	AM392566 AB463234 TSC_hg19_v1_chr2_-_101925153 BC019355 BC032328 AK074985 AK075141 AY450390 BC045743 AK129799 NM_173647	56075	-	AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_017546|C2orf29|55571|chromosome 2 open reading frame 29##AF103798|C2orf29|55571|chromosome 2 open reading frame 29##BC064421|C2orf29|55571|chromosome 2 open reading frame 29##BC018664|C2orf29|55571|chromosome 2 open reading frame 29##AM392566|RNF149|284996|ring finger protein 149##BC019355|RNF149|284996|ring finger protein 149##BC032328|RNF149|284996|ring finger protein 149##AK074985|RNF149|284996|ring finger protein 149##AK075141|RNF149|284996|ring finger protein 149##AY450390|RNF149|284996|ring finger protein 149##BC045743|RNF149|284996|ring finger protein 149##AK129799|RNF149|284996|ring finger protein 149##NM_173647|RNF149|284996|ring finger protein 149	0.010622	
chr2	102888458	102888550	reg1027211.p1	5.146	+	AF284434 NM_003854 U49065 BC107064	-85056	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	-118084	+	TSC_hg19_v1_chr2_+_102759205 X16896	-129272	+	AB012701 NM_016232 AK313967 AK303389	39487	+	BC012580 BC030975 NM_003856 AK291578 AB029084	65227	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	90604	+	AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##X16896|IL1R1|3554|interleukin 1 receptor, type I##AB012701|IL1RL1|9173|interleukin 1 receptor-like 1##NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1##AK313967|IL18R1|8809|interleukin 18 receptor 1##AK303389|IL1RL1|9173|interleukin 1 receptor-like 1##BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1	0.047458	
chr2	96899693	96899820	reg1026485.p1	5.146	+	TSC_hg19_v1_chr2_-_96874588 NM_020151	-25158	-	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	-25222	-	TSC_hg19_v1_chr2_+_96874144 AK311432	-25602	+	BC101730 BC101732 NM_001037228	6220	+	TSC_hg19_v1_chr2_-_96931700 BC039892	31931	-	TSC_hg19_v1_chr2_-_96931736 AX775835 BC028575 AK000514 AK293276	31973	-	NM_020151|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC101730|LOC285033|285033|uncharacterized LOC285033##BC101732|LOC285033|285033|uncharacterized LOC285033##NM_001037228|LOC285033|285033|uncharacterized LOC285033##BC039892|TMEM127|55654|transmembrane protein 127##BC028575|TMEM127|55654|transmembrane protein 127##AK000514|TMEM127|55654|transmembrane protein 127##AK293276|TMEM127|55654|transmembrane protein 127	0.026145	
chr3	114055061	114055242	reg1025704.p1	5.146	+	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	-42298	+	NM_007136 X65233	-98727	-	AY228457 AY228458 NM_000796 NM_033663 AY228454	-157235	-	AF139460 NM_001164342	47337	-	BC029041 NM_001164347	287901	-	AK315307 NM_001164346 TSC_hg19_v1_chr3_-_114343793	288643	-	EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##AY228457|DRD3|1814|dopamine receptor D3##AY228458|DRD3|1814|dopamine receptor D3##NM_000796|DRD3|1814|dopamine receptor D3##NM_033663|DRD3|1814|dopamine receptor D3##AY228454|DRD3|1814|dopamine receptor D3##AF139460|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164342|ZBTB20|26137|zinc finger and BTB domain containing 20##BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20	0.013862	
chr7	7702342	7702473	reg1031064.p1	5.146	+	TSC_hg19_v1_chr7_+_7680382 AK295253	-22034	+	BT007320 AB464142 TSC_hg19_v1_chr7_-_7680067 L07493 BC005264 AK311842	-22320	-	TSC_hg19_v1_chr7_+_7606667 AK294561	-95721	+	BC009868 NM_002947	55830	-	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	306026	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	599309	-	AK295253|LOC729852|729852|uncharacterized LOC729852##BT007320|RPA3|6119|replication protein A3, 14kDa##L07493|RPA3|6119|replication protein A3, 14kDa##BC005264|RPA3|6119|replication protein A3, 14kDa##AK311842|RPA3|6119|replication protein A3, 14kDa##AK294561|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa	0.18747	
chr9	93910076	93910257	reg1026177.p1	5.146	+	NM_001174167 X73568	-320433	+	TSC_hg19_v1_chr9_+_93564206 NM_001174168 BC011399	-345951	+	TSC_hg19_v1_chr9_+_93564100 AK290927	-346051	+	TSC_hg19_v1_chr9_-_94124185 AB528075 AM393420 CU676666 DQ892036 DQ895227 X79888 AK302453	214004	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	214033	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	275878	-	NM_001174167|SYK|6850|spleen tyrosine kinase##X73568|SYK|6850|spleen tyrosine kinase##NM_001174168|SYK|6850|spleen tyrosine kinase##BC011399|SYK|6850|spleen tyrosine kinase##AK290927|SYK|6850|spleen tyrosine kinase##AM393420|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ892036|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ895227|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##X79888|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK302453|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated	0.0	
chrX	114381901	114382040	reg1028730.p2	5.146	+	X95302 AK308523 GQ494004 U70981 AK291957 NM_000640 Y08768 AK309444	-129796	-	NM_000868 U49516 BC028688 AK295753 TSC_hg19_v1_chrX_+_113818558 M81778	-563398	+	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	-2297908	-	NM_001145346 AK301904	42005	+	AB587552 TSC_hg19_v1_chrX_-_114468623 BC125223 BC125224 BX647193 NM_001243963 NM_020871	86649	-	NM_016383 AK093369 AX748081 AK314765 AF124430 BC128134 BC128135	142335	+	X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2##GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2##U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2##Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin##NM_001145346|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##AK301904|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_001243963|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_016383|LUZP4|51213|leucine zipper protein 4##AK093369|LUZP4|51213|leucine zipper protein 4##AK314765|LUZP4|51213|leucine zipper protein 4##AF124430|LUZP4|51213|leucine zipper protein 4##BC128134|LUZP4|51213|leucine zipper protein 4##BC128135|LUZP4|51213|leucine zipper protein 4	0.582992	CTCF.p2:11:0.583
chr11	115093289	115093457	reg1026419.p2	5.145	+	AY309502 TSC_hg19_v1_chr11_-_115088658	-4725	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-544125	+	AK000134 AK225236 TSC_hg19_v1_chr11_-_114466485 NM_001077639 NM_017678	-626895	-	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	281807	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	1550325	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	1565342	-	AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##AK000134|FAM55D|54827|family with sequence similarity 55, member D##AK225236|FAM55D|54827|family with sequence similarity 55, member D##NM_001077639|FAM55D|54827|family with sequence similarity 55, member D##NM_017678|FAM55D|54827|family with sequence similarity 55, member D##AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259	0.135792	
chr12	11965626	11965793	reg1025919.p1	5.145	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-162723	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-162935	+	TSC_hg19_v1_chr12_+_11802659 AK289441	-163036	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	258174	+	AF281254 AF281255 NM_030766 NM_138722	258692	+	AK074543 TSC_hg19_v1_chr12_-_12291395	325675	-	U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AK289441|ETV6|2120|ets variant 6##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6	0.0	
chr12	122906732	122906837	reg1027748.p1	5.145	+	AF045652 AF045653 AY563000 TSC_hg19_v1_chr12_-_122839059	-67747	-	TSC_hg19_v1_chr12_-_122751044 NM_022916	-155729	-	AB527663 EU176253 TSC_hg19_v1_chr12_-_122750984 AL833244 BC016617 AF439857 AK026840 AK315545	-155786	-	X64838 TSC_hg19_v1_chr12_-_122907155 M97501 NM_001247997 NM_002956 NM_198240	453	-	TSC_hg19_v1_chr12_-_122985404 BC065918	78643	-	TSC_hg19_v1_chr12_-_122985537 AK027702 AK074638 NM_017612	78734	-	AF045652|CLIP1|6249|CAP-GLY domain containing linker protein 1##AF045653|CLIP1|6249|CAP-GLY domain containing linker protein 1##AY563000|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_022916|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##EU176253|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##BC016617|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##AF439857|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##AK026840|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##AK315545|VPS33A|65082|vacuolar protein sorting 33 homolog A (S. cerevisiae)##X64838|CLIP1|6249|CAP-GLY domain containing linker protein 1##M97501|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_001247997|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_002956|CLIP1|6249|CAP-GLY domain containing linker protein 1##NM_198240|CLIP1|6249|CAP-GLY domain containing linker protein 1##BC065918|ZCCHC8|55596|zinc finger, CCHC domain containing 8##AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8##AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8##NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8	0.258277	
chr12	124246506	124246611	reg1027952.p1	5.145	+	TSC_hg19_v1_chr12_+_124196946 AK289391 AF112972 HQ258004	-49532	+	TSC_hg19_v1_chr12_+_124196899 BC022300	-49662	+	TSC_hg19_v1_chr12_+_124196859 BC068531 NM_012463	-49697	+	NM_207437	483	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	210641	-	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	211171	+	AK289391|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##AF112972|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##HQ258004|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##BC022300|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##BC068531|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##NM_012463|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##NM_207437|DNAH10|196385|dynein, axonemal, heavy chain 10##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664	0.018597	
chr4	2188193	2188316	reg1028676.p1	5.145	+	NM_178557	-127016	+	NM_001168243 TSC_hg19_v1_chr4_+_2043732 BC062790 BC038466 BC047038 NM_001141936	-144496	+	NM_005663	-177293	-	AB527447 AY136549 NM_181808	42703	-	AK056134 AK293948 AK303673 TSC_hg19_v1_chr4_-_2243849 CR749640 NM_024511 BC003648	55614	-	AB463859 BT019969 BT019970 AF040963 AF082740 NM_006454 TSC_hg19_v1_chr4_-_2263788 BC068060	75498	-	NM_178557|NAT8L|339983|N-acetyltransferase 8-like (GCN5-related, putative)##NM_001168243|C4orf48|401115|chromosome 4 open reading frame 48##BC062790|C4orf48|401115|chromosome 4 open reading frame 48##BC038466|C4orf48|401115|chromosome 4 open reading frame 48##BC047038|C4orf48|401115|chromosome 4 open reading frame 48##NM_001141936|C4orf48|401115|chromosome 4 open reading frame 48##NM_005663|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AY136549|POLN|353497|polymerase (DNA directed) nu##NM_181808|POLN|353497|polymerase (DNA directed) nu##AK056134|HAUS3|79441|HAUS augmin-like complex, subunit 3##AK293948|HAUS3|79441|HAUS augmin-like complex, subunit 3##AK303673|POLN|353497|polymerase (DNA directed) nu##CR749640|HAUS3|79441|HAUS augmin-like complex, subunit 3##NM_024511|HAUS3|79441|HAUS augmin-like complex, subunit 3##BC003648|HAUS3|79441|HAUS augmin-like complex, subunit 3##BT019969|MXD4|10608|MAX dimerization protein 4##BT019970|MXD4|10608|MAX dimerization protein 4##AF040963|MXD4|10608|MAX dimerization protein 4##AF082740|MXD4|10608|MAX dimerization protein 4##NM_006454|MXD4|10608|MAX dimerization protein 4##BC068060|MXD4|10608|MAX dimerization protein 4	0.364698	CTCF.p2:22:0.365
chr8	32020278	32020415	reg1029177.p1	5.145	+	NM_013962	-523079	+	TSC_hg19_v1_chr8_+_30891325 AF091214	-1129055	+	AF195513 AY077841 NM_001015508	-1129116	-	AK298132 NM_001160002 NM_001160004 NM_001160005 NM_001160007 NM_001160008 NM_004495 NM_013956 NM_013957 NM_013958 NM_013960 NM_013964 M94168 BC006492 TSC_hg19_v1_chr8_+_32405834 M94167 AF026146 AK097005 AK290730 L12261	385443	+	AK289927 NM_013959	483904	+	NM_001159996 AK293270 AK293240	559046	+	NM_013962|NRG1|3084|neuregulin 1##AF091214|WRN|7486|Werner syndrome, RecQ helicase-like##AF195513|PURG|29942|purine-rich element binding protein G##AY077841|PURG|29942|purine-rich element binding protein G##NM_001015508|PURG|29942|purine-rich element binding protein G##AK298132|NRG1|3084|neuregulin 1##NM_001160002|NRG1|3084|neuregulin 1##NM_001160004|NRG1|3084|neuregulin 1##NM_001160005|NRG1|3084|neuregulin 1##NM_001160007|NRG1|3084|neuregulin 1##NM_001160008|NRG1|3084|neuregulin 1##NM_004495|NRG1|3084|neuregulin 1##NM_013956|NRG1|3084|neuregulin 1##NM_013957|NRG1|3084|neuregulin 1##NM_013958|NRG1|3084|neuregulin 1##NM_013960|NRG1|3084|neuregulin 1##NM_013964|NRG1|3084|neuregulin 1##M94168|NRG1|3084|neuregulin 1##BC006492|NRG1|3084|neuregulin 1##M94167|NRG1|3084|neuregulin 1##AF026146|NRG1|3084|neuregulin 1##AK097005|NRG1|3084|neuregulin 1##AK290730|NRG1|3084|neuregulin 1##L12261|NRG1|3084|neuregulin 1##AK289927|NRG1|3084|neuregulin 1##NM_013959|NRG1|3084|neuregulin 1##NM_001159996|NRG1|3084|neuregulin 1##AK293270|NRG1|3084|neuregulin 1##AK293240|NRG1|3084|neuregulin 1	0.87104	CTCF.p2:10:0.871
chr15	23263202	23263317	reg1026848.p1	5.144	+	DQ309040 BC048987 TSC_hg19_v1_chr15_-_23208467	-54848	-	TSC_hg19_v1_chr15_-_23115247 BC044583	-148011	-	BC025678 NM_001142275	-176417	-	TSC_hg19_v1_chr15_-_23378205 AK308640	114931	-	TSC_hg19_v1_chr15_-_23378229 AF041081 AF041080	114985	-	NM_005664	547194	+	DQ309040|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC048987|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC044583|LOC283683|283683|uncharacterized LOC283683##BC025678|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##NM_001142275|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##AK308640|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041080|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##NM_005664|MKRN3|7681|makorin ring finger protein 3	0.864445	CTCF.p2:3:0.836
chr22	31478744	31478875	reg1027417.p1	5.144	+	TSC_hg19_v1_chr22_+_31477303 NM_006932 NM_134269 NM_134270 AK128719 AF064238 AJ010306 AY061971 AY061972 Y13492 AK096953 AK293681 BC034237 AK300854	-1527	+	AK056480 TSC_hg19_v1_chr22_+_31366813	-112072	+	AB020659 NM_014941	-114623	-	AK304084 NM_001207017 TSC_hg19_v1_chr22_+_31478895	63	+	AK128627 AK295418 NM_001207018 TSC_hg19_v1_chr22_+_31481009	2192	+	TSC_hg19_v1_chr22_+_31487319 AK301289 AK307627 AK225648 Z49989	8515	+	NM_006932|SMTN|6525|smoothelin##NM_134269|SMTN|6525|smoothelin##NM_134270|SMTN|6525|smoothelin##AK128719|SMTN|6525|smoothelin##AF064238|SMTN|6525|smoothelin##AJ010306|SMTN|6525|smoothelin##AY061971|SMTN|6525|smoothelin##AY061972|SMTN|6525|smoothelin##Y13492|SMTN|6525|smoothelin##AK096953|SMTN|6525|smoothelin##AK293681|SMTN|6525|smoothelin##BC034237|SMTN|6525|smoothelin##AK300854|SMTN|6525|smoothelin##AB020659|MORC2|22880|MORC family CW-type zinc finger 2##NM_014941|MORC2|22880|MORC family CW-type zinc finger 2##AK304084|SMTN|6525|smoothelin##NM_001207017|SMTN|6525|smoothelin##AK128627|SMTN|6525|smoothelin##AK295418|SMTN|6525|smoothelin##NM_001207018|SMTN|6525|smoothelin##AK301289|SMTN|6525|smoothelin##AK307627|SMTN|6525|smoothelin##AK225648|SMTN|6525|smoothelin##Z49989|SMTN|6525|smoothelin	0.984403	CTCF.p2:9:0.984
chr2	89948217	89948394	reg1026238.p1	5.144	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-328452	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-435072	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-505716	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	129449	+	TSC_hg19_v1_chr2_+_90211706 Z69013	263413	+	TSC_hg19_v1_chr2_-_91847997 BC030764	1899698	-	BC070334|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus	0.929573	CTCF.p2:-19:0.930
chr5	139029316	139029414	reg1022061.p2	5.144	+	TSC_hg19_v1_chr5_+_139028524 AK001782	-857	+	TSC_hg19_v1_chr5_+_139028290 AB097005 AB097032 NM_016463	-1198	+	BC024040 BC041013 TSC_hg19_v1_chr5_+_139027968 BC050046 BC017439	-1381	+	BC002490 TSC_hg19_v1_chr5_+_139060088 AB463548 GQ379202 AK314420	30719	+	AF151029 TSC_hg19_v1_chr5_+_139060229	30847	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	31027	+	AK001782|CXXC5|51523|CXXC finger protein 5##AB097005|CXXC5|51523|CXXC finger protein 5##AB097032|CXXC5|51523|CXXC finger protein 5##NM_016463|CXXC5|51523|CXXC finger protein 5##BC024040|CXXC5|51523|CXXC finger protein 5##BC041013|CXXC5|51523|CXXC finger protein 5##BC050046|CXXC5|51523|CXXC finger protein 5##BC017439|CXXC5|51523|CXXC finger protein 5##BC002490|CXXC5|51523|CXXC finger protein 5##GQ379202|CXXC5|51523|CXXC finger protein 5##AK314420|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5	0.0	
chr5	436560	436672	reg1027470.p2	5.144	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-132326	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-164811	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-164848	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	6614	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	6734	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	36496	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.37525	CTCF.p2:6:0.375
chr10	73892297	73892390	reg1027955.p1	5.143	+	D87465 TSC_hg19_v1_chr10_-_73848773 NM_001134434 NM_014767	-43566	-	BC023558 NM_001244950	-43813	-	TSC_hg19_v1_chr10_-_73848310 AJ001453	-44003	-	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	83421	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	83445	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	83768	-	D87465|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##NM_001134434|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##NM_014767|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##BC023558|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##NM_001244950|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AJ001453|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1	0.685414	CTCF.p2:-11:0.685
chr11	350818	350999	reg1023719.p1	5.142	+	TSC_hg19_v1_chr11_-_320925 X57352	-29921	-	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	-30064	-	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	-36897	+	TSC_hg19_v1_chr11_+_369724 NM_178537 AB089939 BC131528	18857	+	TSC_hg19_v1_chr11_+_394208 BC000081 NM_007183 AK025067 AK223511 Z98265	43304	+	AF053719 TSC_hg19_v1_chr11_+_394242 DQ891692 DQ894875 CU674026	43356	+	X57352|IFITM3|10410|interferon induced transmembrane protein 3##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3##J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_178537|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##AB089939|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC131528|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC000081|PKP3|11187|plakophilin 3##NM_007183|PKP3|11187|plakophilin 3##AK025067|PKP3|11187|plakophilin 3##AK223511|PKP3|11187|plakophilin 3##Z98265|PKP3|11187|plakophilin 3##AF053719|PKP3|11187|plakophilin 3##DQ891692|PKP3|11187|plakophilin 3##DQ894875|PKP3|11187|plakophilin 3	0.0	
chr14	89882645	89882785	reg1027025.p2	5.142	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-3939	-	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-591722	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-623505	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	695	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	202880	-	BC001787 BX247991 AK298930 AK094740 NM_145231	538345	-	EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11	0.0	
chr17	28009198	28009327	reg1027992.p2	5.142	+	BC028205 TSC_hg19_v1_chr17_-_27949878 AL833952	-59411	-	AK096431 NM_032854	-60870	-	TSC_hg19_v1_chr17_+_27920483 NM_152345	-88760	+	TSC_hg19_v1_chr17_-_28088446 BC011636	79196	-	AK302745 AK303060 NM_001145053 AK299608	247634	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	247871	-	BC028205|CORO6|84940|coronin 6##AL833952|CORO6|84940|coronin 6##AK096431|CORO6|84940|coronin 6##NM_032854|CORO6|84940|coronin 6##NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B##BC011636|SSH2|85464|slingshot homolog 2 (Drosophila)##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)	0.0	
chr17	80822010	80822191	reg1022720.p2	5.142	+	BC109036 BC109037 AK301690 AK023903 NM_024702	-24191	-	TSC_hg19_v1_chr17_+_80710051 AJ006417 DQ891885 EU176650	-112052	+	TSC_hg19_v1_chr17_+_80710000 AK091959 AX747278	-112092	+	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	184370	-	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	187569	-	TSC_hg19_v1_chr17_+_81037508 BC082252 NM_001004431 BC118558 BC118638	215442	+	BC109036|ZNF750|79755|zinc finger protein 750##BC109037|ZNF750|79755|zinc finger protein 750##AK301690|ZNF750|79755|zinc finger protein 750##AK023903|ZNF750|79755|zinc finger protein 750##NM_024702|ZNF750|79755|zinc finger protein 750##AJ006417|TBCD|6904|tubulin folding cofactor D##DQ891885|TBCD|6904|tubulin folding cofactor D##EU176650|TBCD|6904|tubulin folding cofactor D##AK091959|TBCD|6904|tubulin folding cofactor D##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like##NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like	0.0	
chr18	55637788	55637885	reg1026422.p1	5.142	+	TSC_hg19_v1_chr18_-_55470548 NM_005603	-167366	-	NM_001242804 BC040476	-340279	+	TSC_hg19_v1_chr18_-_55289034 AK293985 NM_004539	-348735	-	TSC_hg19_v1_chr18_+_55711515 NM_001144967 NM_001243960 NM_015277	73700	+	TSC_hg19_v1_chr18_+_55711771 AB071179	73948	+	DQ890913 DQ893350 AY312514 TSC_hg19_v1_chr18_+_55711911	74070	+	NM_005603|ATP8B1|5205|ATPase, aminophospholipid transporter, class I, type 8B, member 1##NM_001242804|LOC100505549|100505549|uncharacterized LOC100505549##BC040476|LOC100505549|100505549|uncharacterized LOC100505549##AK293985|NARS|4677|asparaginyl-tRNA synthetase##NM_004539|NARS|4677|asparaginyl-tRNA synthetase##NM_001144967|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001243960|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_015277|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB071179|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	1.647175	CTCF.p2:-12:0.909	CTCF.p2:60:0.738
chr22	29563370	29563496	reg1020074.p1	5.142	+	TSC_hg19_v1_chr22_+_29469035 BC063787 NM_001039570 NM_032045 AK056425 AB059618	-94411	+	CR456405 BC074758 BC126262 BC126264 AL035364 NM_015370	-105584	-	TSC_hg19_v1_chr22_+_29449893 BC042614	-113508	+	TSC_hg19_v1_chr22_+_29601914 BC046358 NM_133455 CR456407 CU012965 CU013253 AB463024 AJ416090	38459	+	TSC_hg19_v1_chr22_-_29663824 AL050346 NM_012265	100435	-	NM_001163285 NM_001163286 NM_001163287 NM_005243 NM_013986 TSC_hg19_v1_chr22_+_29664088	100614	+	BC063787|KREMEN1|83999|kringle containing transmembrane protein 1##NM_001039570|KREMEN1|83999|kringle containing transmembrane protein 1##NM_032045|KREMEN1|83999|kringle containing transmembrane protein 1##AK056425|KREMEN1|83999|kringle containing transmembrane protein 1##AB059618|KREMEN1|83999|kringle containing transmembrane protein 1##CR456405|C22orf31|25770|chromosome 22 open reading frame 31##BC074758|C22orf31|25770|chromosome 22 open reading frame 31##BC126262|C22orf31|25770|chromosome 22 open reading frame 31##BC126264|C22orf31|25770|chromosome 22 open reading frame 31##AL035364|C22orf31|25770|chromosome 22 open reading frame 31##NM_015370|C22orf31|25770|chromosome 22 open reading frame 31##BC042614|ZNRF3|84133|zinc and ring finger 3##BC046358|EMID1|129080|EMI domain containing 1##NM_133455|EMID1|129080|EMI domain containing 1##CR456407|EMID1|129080|EMI domain containing 1##CU012965|EMID1|129080|EMI domain containing 1##CU013253|EMID1|129080|EMI domain containing 1##AJ416090|EMID1|129080|EMI domain containing 1##AL050346|RHBDD3|25807|rhomboid domain containing 3##NM_012265|RHBDD3|25807|rhomboid domain containing 3##NM_001163285|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163286|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163287|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_005243|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_013986|EWSR1|2130|Ewing sarcoma breakpoint region 1	0.010419	
chr22	41939871	41940016	reg1031528.p1	5.142	+	TSC_hg19_v1_chr22_+_41865120 AK293562 AK297213 AK301321 AK314845 AK302691 AK296260 BC026196 BC014092 NM_001098 U80040 CR456365 AB385022 CR536568 CU012932 CU013220 DQ893674 DQ895836	-74812	+	AB489147 CU012956 CU013244 EU446678 TSC_hg19_v1_chr22_-_41864681 BC075808 CR456398 BC007321 NM_032758	-75259	-	TSC_hg19_v1_chr22_-_41842881 NM_016272	-97004	-	TSC_hg19_v1_chr22_-_41940381 AB051452 BC088367 BC017248	410	-	TSC_hg19_v1_chr22_-_41940495 AY092087 AK026524 AK129663 NM_138338 NM_001018050 NM_001018052 CR456459	557	-	TSC_hg19_v1_chr22_+_41957014 NM_014460 AK313407 BC067113 AL834417	17126	+	AK293562|ACO2|50|aconitase 2, mitochondrial##AK297213|ACO2|50|aconitase 2, mitochondrial##AK301321|ACO2|50|aconitase 2, mitochondrial##AK314845|ACO2|50|aconitase 2, mitochondrial##AK302691|ACO2|50|aconitase 2, mitochondrial##AK296260|ACO2|50|aconitase 2, mitochondrial##BC026196|ACO2|50|aconitase 2, mitochondrial##BC014092|ACO2|50|aconitase 2, mitochondrial##NM_001098|ACO2|50|aconitase 2, mitochondrial##U80040|ACO2|50|aconitase 2, mitochondrial##CR456365|ACO2|50|aconitase 2, mitochondrial##CR536568|ACO2|50|aconitase 2, mitochondrial##CU012932|ACO2|50|aconitase 2, mitochondrial##CU013220|ACO2|50|aconitase 2, mitochondrial##DQ893674|ACO2|50|aconitase 2, mitochondrial##DQ895836|ACO2|50|aconitase 2, mitochondrial##CU012956|PHF5A|84844|PHD finger protein 5A##CU013244|PHF5A|84844|PHD finger protein 5A##EU446678|PHF5A|84844|PHD finger protein 5A##BC075808|PHF5A|84844|PHD finger protein 5A##CR456398|PHF5A|84844|PHD finger protein 5A##BC007321|PHF5A|84844|PHD finger protein 5A##NM_032758|PHF5A|84844|PHD finger protein 5A##NM_016272|TOB2|10766|transducer of ERBB2, 2##AB051452|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC088367|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC017248|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AY092087|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK026524|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK129663|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_138338|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018050|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018052|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##CR456459|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_014460|CSDC2|27254|cold shock domain containing C2, RNA binding##AK313407|CSDC2|27254|cold shock domain containing C2, RNA binding##BC067113|CSDC2|27254|cold shock domain containing C2, RNA binding##AL834417|CSDC2|27254|cold shock domain containing C2, RNA binding	0.155761	
chr3	14905350	14905446	reg1028197.p2	5.142	+	NM_152536	-44930	+	NM_001184957 NM_001184958 NM_032137 AK131481 BC030599 AL834386 AL136781 BC038406	-188753	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	-212115	+	TSC_hg19_v1_chr3_-_14988966 BC014104 BC063441 BC039246	83558	-	TSC_hg19_v1_chr3_-_14989000 AK055924	83639	-	TSC_hg19_v1_chr3_+_14989089 AK290590 L27586 NM_003298	83757	+	NM_152536|FGD5|152273|FYVE, RhoGEF and PH domain containing 5##NM_001184957|C3orf20|84077|chromosome 3 open reading frame 20##NM_001184958|C3orf20|84077|chromosome 3 open reading frame 20##NM_032137|C3orf20|84077|chromosome 3 open reading frame 20##AK131481|C3orf20|84077|chromosome 3 open reading frame 20##BC030599|C3orf20|84077|chromosome 3 open reading frame 20##AL834386|C3orf20|84077|chromosome 3 open reading frame 20##AL136781|C3orf20|84077|chromosome 3 open reading frame 20##BC038406|C3orf20|84077|chromosome 3 open reading frame 20##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19##BC014104|LOC100505641|100505641|uncharacterized LOC100505641##BC063441|LOC100505641|100505641|uncharacterized LOC100505641##BC039246|LOC100505641|100505641|uncharacterized LOC100505641##AK055924|LOC100505641|100505641|uncharacterized LOC100505641##AK290590|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2##L27586|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2##NM_003298|NR2C2|7182|nuclear receptor subfamily 2, group C, member 2	0.0	
chr4	183899811	183899899	reg1027577.p1	5.142	+	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	-61221	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	-61325	-	NM_001080477 HE578284 HE578285	-654701	+	TSC_hg19_v1_chr4_+_184020431 NM_024949	120623	+	NM_001111319	342071	-	NM_001185149	343723	-	NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_024949|WWC2|80014|WW and C2 domain containing 2##NM_001111319|CLDN22|53842|claudin 22##NM_001185149|CLDN24|100132463|claudin 24	0.0	
chrX	112004025	112004182	reg1028018.p1	5.142	+	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	-80764	-	AK128465 NM_001004308	-677851	+	AF054568 NM_012471	-678100	-	AB384557 AY987378 NM_001113490	62250	-	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	79959	-	NM_000868 U49516 BC028688 AK295753 TSC_hg19_v1_chrX_+_113818558 M81778	1814469	+	BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK128465|ZCCHC16|340595|zinc finger, CCHC domain containing 16##NM_001004308|ZCCHC16|340595|zinc finger, CCHC domain containing 16##AF054568|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##NM_012471|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin##NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C	0.995245	CTCF.p2:9:0.995
chr14	74969002	74969100	reg1026938.p1	5.141	+	TSC_hg19_v1_chr14_+_74960467 AK290728 NM_194279 BC015771 BX248252 BC032893	-8593	+	TSC_hg19_v1_chr14_-_74960037 AK311931 BC002532 NM_006432	-8992	-	AK222474 TSC_hg19_v1_chr14_-_74960013 AK300879	-9037	-	TSC_hg19_v1_chr14_-_75078940 BC078659 Z37976 NM_000428 S82451	109808	-	TSC_hg19_v1_chr14_-_75179784 AB002315 AK304217 AK296912 BX248747 BC032944 NM_001039479	210725	-	TSC_hg19_v1_chr14_+_75179883 NM_015962 AK290666 BC022361 AK021636 BC080600 BX248271	210824	+	AK290728|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##NM_194279|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##BC015771|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##BX248252|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##BC032893|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##AK311931|NPC2|10577|Niemann-Pick disease, type C2##BC002532|NPC2|10577|Niemann-Pick disease, type C2##NM_006432|NPC2|10577|Niemann-Pick disease, type C2##AK222474|NPC2|10577|Niemann-Pick disease, type C2##AK300879|NPC2|10577|Niemann-Pick disease, type C2##BC078659|LTBP2|4053|latent transforming growth factor beta binding protein 2##Z37976|LTBP2|4053|latent transforming growth factor beta binding protein 2##NM_000428|LTBP2|4053|latent transforming growth factor beta binding protein 2##S82451|LTBP2|4053|latent transforming growth factor beta binding protein 2##AB002315|KIAA0317|9870|KIAA0317##AK304217|KIAA0317|9870|KIAA0317##AK296912|KIAA0317|9870|KIAA0317##BX248747|KIAA0317|9870|KIAA0317##BC032944|KIAA0317|9870|KIAA0317##NM_001039479|KIAA0317|9870|KIAA0317##NM_015962|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK290666|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC022361|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK021636|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC080600|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BX248271|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)	0.353229	CTCF.p2:-12:0.353
chr1	47903541	47903665	reg1021369.p1	5.141	+	AF042832 NM_004474	-1915	+	AF275722 NM_012186	-21860	+	TSC_hg19_v1_chr1_+_47799646 AF259961	-103962	+	NM_001194986	558958	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	784789	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	1034075	-	AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##NM_001194986|LOC388630|388630|UPF0632 protein A##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6	0.996476	CTCF.p2:43:0.996
chr15	74425706	74425810	reg1029723.p1	5.141	+	TSC_hg19_v1_chr15_+_74422926 AY358316	-2826	+	NM_020851 AK290467 TSC_hg19_v1_chr15_+_74422912 AK092297 AX747460	-2929	+	NM_001130138	-3169	+	AK297730 TSC_hg19_v1_chr15_+_74466050 AB024536 AK000817 NM_005545	40307	+	TSC_hg19_v1_chr15_+_74466176 BC111013	40420	+	AK225606 AK223267 TSC_hg19_v1_chr15_+_74466899 AB003184 NM_201526 BC022478	41143	+	AY358316|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_020851|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AK290467|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AK092297|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130138|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AB024536|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##AK000817|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##NM_005545|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##BC111013|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##AK225606|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##AK223267|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##AB003184|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##NM_201526|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat##BC022478|ISLR|3671|immunoglobulin superfamily containing leucine-rich repeat	0.016378	
chr4	149919986	149920119	reg1029731.p1	5.141	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-556468	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-556713	-	TSC_hg19_v1_chr4_-_149357955 AB587357	-562070	-	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	1079473	+	NM_006439	1583024	+	TSC_hg19_v1_chr4_-_151770612 AB208838	1850597	-	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.270566	CTCF.p2:10:0.271
chr11	64880082	64880209	reg1025303.p1	5.140	+	TSC_hg19_v1_chr11_+_64879343 NM_003273 AK290935 AK296441 BC038353 BC009052 AF096304 AF023676 BC012857 CU679239 CU680420	-755	+	BC010872 TSC_hg19_v1_chr11_+_64863712 BC007198 BC017438	-16431	+	TSC_hg19_v1_chr11_+_64863710 BC010540	-16440	+	AK223333 BC041076 AK027081 BC057799 BC029825 BC038089 AF119497 NM_014205 BC052240 AK223358	5006	-	TSC_hg19_v1_chr11_-_64889607 BC051834 BC033877 D28403 X65923 AK026639 NM_001997	9481	-	TSC_hg19_v1_chr11_+_64889792 NM_004927 AK129986 AK311821 AK129795	9605	+	NM_003273|TM7SF2|7108|transmembrane 7 superfamily member 2##AK290935|TM7SF2|7108|transmembrane 7 superfamily member 2##AK296441|TM7SF2|7108|transmembrane 7 superfamily member 2##BC038353|TM7SF2|7108|transmembrane 7 superfamily member 2##BC009052|TM7SF2|7108|transmembrane 7 superfamily member 2##AF096304|TM7SF2|7108|transmembrane 7 superfamily member 2##AF023676|TM7SF2|7108|transmembrane 7 superfamily member 2##BC012857|TM7SF2|7108|transmembrane 7 superfamily member 2##BC010872|C11orf2|738|chromosome 11 open reading frame 2##BC007198|C11orf2|738|chromosome 11 open reading frame 2##BC017438|C11orf2|738|chromosome 11 open reading frame 2##BC010540|C11orf2|738|chromosome 11 open reading frame 2##AK223333|ZNHIT2|741|zinc finger, HIT-type containing 2##AK027081|ZNHIT2|741|zinc finger, HIT-type containing 2##BC057799|ZNHIT2|741|zinc finger, HIT-type containing 2##BC029825|ZNHIT2|741|zinc finger, HIT-type containing 2##BC038089|ZNHIT2|741|zinc finger, HIT-type containing 2##AF119497|ZNHIT2|741|zinc finger, HIT-type containing 2##NM_014205|ZNHIT2|741|zinc finger, HIT-type containing 2##BC052240|ZNHIT2|741|zinc finger, HIT-type containing 2##AK223358|ZNHIT2|741|zinc finger, HIT-type containing 2##BC051834|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##BC033877|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##D28403|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##X65923|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##AK026639|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##NM_001997|FAU|2197|Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed##NM_004927|MRPL49|740|mitochondrial ribosomal protein L49##AK129986|MRPL49|740|mitochondrial ribosomal protein L49##AK311821|MRPL49|740|mitochondrial ribosomal protein L49##AK129795|MRPL49|740|mitochondrial ribosomal protein L49	0.674053	CTCF.p2:7:0.674
chr1	24072170	24072308	reg1028851.p2	5.140	+	L47345 TSC_hg19_v1_chr1_+_24069969 BC002883 AK313079 AB527691 DQ893026 DQ896270 AF116729	-2256	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	-2335	+	TSC_hg19_v1_chr1_+_24018295 BC018970	-53940	+	TSC_hg19_v1_chr1_-_24104774 AK055276 AL049675	32530	-	TSC_hg19_v1_chr1_+_24104875 NM_020362 AF221595 AF271784 AF218024	32634	+	AK296662 TSC_hg19_v1_chr1_+_24104906	32667	+	L47345|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##BC002883|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK313079|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##DQ893026|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##DQ896270|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AF116729|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##BC018970|RPL11|6135|ribosomal protein L11##AL049675|LOC100506963|100506963|uncharacterized LOC100506963##NM_020362|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AF221595|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AF271784|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AF218024|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AK296662|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1	0.0	
chr8	146012829	146012939	reg1025796.p2	5.140	+	TSC_hg19_v1_chr8_-_146012703 BC004480 AL833814 AK096508 NM_030580	-184	-	TSC_hg19_v1_chr8_-_145980977 NM_138367	-31910	-	TSC_hg19_v1_chr8_-_145980846 AK000435	-32030	-	TSC_hg19_v1_chr8_-_146017753 BC012197 NM_033301 BC013104 BC000077	4856	-	AK301073 D28421 TSC_hg19_v1_chr8_-_146017776	4892	-	AK289459 TSC_hg19_v1_chr8_-_146017781 BC093064 NM_000973 AK309619	4909	-	BC004480|ZNF34|80778|zinc finger protein 34##AL833814|ZNF34|80778|zinc finger protein 34##AK096508|ZNF34|80778|zinc finger protein 34##NM_030580|ZNF34|80778|zinc finger protein 34##NM_138367|ZNF251|90987|zinc finger protein 251##AK000435|ZNF251|90987|zinc finger protein 251##BC012197|RPL8|6132|ribosomal protein L8##NM_033301|RPL8|6132|ribosomal protein L8##BC013104|RPL8|6132|ribosomal protein L8##BC000077|RPL8|6132|ribosomal protein L8##AK301073|RPL8|6132|ribosomal protein L8##AK289459|RPL8|6132|ribosomal protein L8##BC093064|RPL8|6132|ribosomal protein L8##NM_000973|RPL8|6132|ribosomal protein L8##AK309619|RPL8|6132|ribosomal protein L8	0.989631	CTCF.p2:9:0.888
chr1	47013768	47013904	reg1023972.p1	5.139	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	-41164	+	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	-153860	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-207393	+	NM_001097611	3050	-	BC002755 AB000409 AK096423 TSC_hg19_v1_chr1_-_47069922	56068	-	TSC_hg19_v1_chr1_-_47069924 AK290456	56092	-	NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##NM_001097611|KNCN|148930|kinocilin##BC002755|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AB000409|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK096423|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK290456|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1	0.930485	CTCF.p2:17:0.930
chr15	77195826	77195961	reg1026977.p2	5.139	+	AF242528 NM_020843	-19690	-	BX647285 NM_001145923	-41609	-	TSC_hg19_v1_chr15_+_76629141 AB593133 AK001022 BC012136 NM_145805 BC011967 EU446846	-566731	+	TSC_hg19_v1_chr15_-_77197682 BC070197 BC107415 AK056515	1771	-	AB040887 TSC_hg19_v1_chr15_-_77197781 AK056095	1878	-	TSC_hg19_v1_chr15_+_77224095 NM_002902 AK313833 X78669 BC004892 BT009790 CU678788	28179	+	AF242528|SCAPER|49855|S-phase cyclin A-associated protein in the ER##NM_020843|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BX647285|SCAPER|49855|S-phase cyclin A-associated protein in the ER##NM_001145923|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AB593133|ISL2|64843|ISL LIM homeobox 2##AK001022|ISL2|64843|ISL LIM homeobox 2##BC012136|ISL2|64843|ISL LIM homeobox 2##NM_145805|ISL2|64843|ISL LIM homeobox 2##BC011967|ISL2|64843|ISL LIM homeobox 2##EU446846|ISL2|64843|ISL LIM homeobox 2##BC070197|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC107415|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056515|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AB040887|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056095|SCAPER|49855|S-phase cyclin A-associated protein in the ER##NM_002902|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##AK313833|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##X78669|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##BC004892|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##BT009790|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain	0.0	
chr19	2085264	2085444	reg1022292.p1	5.139	+	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	-111	-	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-34121	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-39113	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	10911	-	TSC_hg19_v1_chr19_-_2096297 AL832474	10940	-	TSC_hg19_v1_chr19_+_2096913 AY358444 NM_001031735 NM_001039846 DQ196309 DQ196310 AK301957 AY753639 BC014609 BC040964 BC010443	11506	+	AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A##AY358444|IZUMO4|113177|IZUMO family member 4##NM_001031735|IZUMO4|113177|IZUMO family member 4##NM_001039846|IZUMO4|113177|IZUMO family member 4##DQ196309|IZUMO4|113177|IZUMO family member 4##DQ196310|IZUMO4|113177|IZUMO family member 4##AK301957|IZUMO4|113177|IZUMO family member 4##AY753639|IZUMO4|113177|IZUMO family member 4##BC014609|IZUMO4|113177|IZUMO family member 4##BC040964|IZUMO4|113177|IZUMO family member 4##BC010443|IZUMO4|113177|IZUMO family member 4	0.0	
chr2	231663774	231663953	reg1004749.p2	5.139	+	AK292382 NM_001130849 NM_001130850 AK315692	-85585	+	TSC_hg19_v1_chr2_+_231577633 BC020570	-86219	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	-86317	+	TSC_hg19_v1_chr2_+_231729608 NM_001012514 NM_001012516 NM_030926	65697	+	TSC_hg19_v1_chr2_+_231729626 AF271781 AF272043	65766	+	TSC_hg19_v1_chr2_+_231729653 AK075361 AK090975 AK303199 AX746713	65782	+	AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##NM_016289|CAB39|51719|calcium binding protein 39##NM_001012514|ITM2C|81618|integral membrane protein 2C##NM_001012516|ITM2C|81618|integral membrane protein 2C##NM_030926|ITM2C|81618|integral membrane protein 2C##AF271781|ITM2C|81618|integral membrane protein 2C##AF272043|ITM2C|81618|integral membrane protein 2C##AK075361|ITM2C|81618|integral membrane protein 2C##AK090975|ITM2C|81618|integral membrane protein 2C##AK303199|ITM2C|81618|integral membrane protein 2C	0.0	
chr5	157078645	157078794	reg1030587.p1	5.139	+	AF311317 AF326918 TSC_hg19_v1_chr5_-_157002784 Y13786 AK091464 AK308182 AX747000 NM_033274	-75914	-	AB462931 TSC_hg19_v1_chr5_-_157002728	-76003	-	TSC_hg19_v1_chr5_+_156887210 AK026158 AK308830 AK309242	-191449	+	AB527685 TSC_hg19_v1_chr5_-_157079170	409	-	AB022083 AB022441 AK308329 AK225861 BC033492 NM_007017 NM_178424	680	-	BC035142 AK055284 TSC_hg19_v1_chr5_-_157098473 AK302162	19746	-	AF311317|ADAM19|8728|ADAM metallopeptidase domain 19##AF326918|ADAM19|8728|ADAM metallopeptidase domain 19##Y13786|ADAM19|8728|ADAM metallopeptidase domain 19##AK091464|ADAM19|8728|ADAM metallopeptidase domain 19##AK308182|ADAM19|8728|ADAM metallopeptidase domain 19##NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19##AK026158|NIPAL4|348938|NIPA-like domain containing 4##AK308830|NIPAL4|348938|NIPA-like domain containing 4##AK309242|NIPAL4|348938|NIPA-like domain containing 4##AB022083|SOX30|11063|SRY (sex determining region Y)-box 30##AB022441|SOX30|11063|SRY (sex determining region Y)-box 30##AK308329|SOX30|11063|SRY (sex determining region Y)-box 30##BC033492|SOX30|11063|SRY (sex determining region Y)-box 30##NM_007017|SOX30|11063|SRY (sex determining region Y)-box 30##NM_178424|SOX30|11063|SRY (sex determining region Y)-box 30##AK302162|SOX30|11063|SRY (sex determining region Y)-box 30	0.80784	CTCF.p2:7:0.808
chr6	88875776	88875906	reg1022743.p1	5.139	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-75	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-20805	-	BC029488 NM_030960 AF203447	-118311	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	797350	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	797467	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	797506	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.0	
chr1	226925028	226925096	reg1026124.p2	5.138	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-188445	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-188561	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-329259	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	1876	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	133218	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	202884	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.0	
chr1	5697389	5697481	reg1027818.p1	5.138	+	AY282806 NM_001042478 NM_018836	-982331	+	TSC_hg19_v1_chr1_+_4714668 AF175409	-982706	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-1880590	-	NM_001199861	354922	+	TSC_hg19_v1_chr1_-_6052456 AY118228	355010	-	TSC_hg19_v1_chr1_-_6052507 AK124074 AK314326 AF537130 BC040520 NM_015102	355074	-	AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##AF175409|AJAP1|55966|adherens junctions associated protein 1##BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AY118228|NPHP4|261734|nephronophthisis 4##AK124074|NPHP4|261734|nephronophthisis 4##AK314326|NPHP4|261734|nephronophthisis 4##AF537130|NPHP4|261734|nephronophthisis 4##BC040520|NPHP4|261734|nephronophthisis 4##NM_015102|NPHP4|261734|nephronophthisis 4	0.999255	CTCF.p2:0:0.999
chr18	49181818	49181982	reg1025896.p2	5.138	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-457860	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-458188	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-458674	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	684641	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	685213	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2509092	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.0	
chr8	11316434	11316569	reg1028340.p2	5.138	+	BC038546 TSC_hg19_v1_chr8_-_11205010	-111497	-	AJ291677 NM_054028 BC131696	-127991	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	-174146	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	7728	-	S76617 NM_001715 BC018703 BC004473 BC038555	35092	+	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	245219	+	BC038546|LOC100129129|100129129|uncharacterized LOC100129129##AJ291677|SLC35G5|83650|solute carrier family 35, member G5##NM_054028|SLC35G5|83650|solute carrier family 35, member G5##BC131696|SLC35G5|83650|solute carrier family 35, member G5##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4	0.531927	CTCF.p2:-10:0.350
chr9	128170518	128170584	reg1005566.p2	5.138	+	TSC_hg19_v1_chr9_+_128024122 AK056493 NM_015635 AB040954 BC114937 BC114962	-146402	+	TSC_hg19_v1_chr9_+_128024104 BC110990	-146447	+	TSC_hg19_v1_chr9_+_128024097 AK296381	-146453	+	TSC_hg19_v1_chr9_-_128469297 M37191	298759	-	TSC_hg19_v1_chr9_-_128469466 AK290060	298916	-	AL833042 TSC_hg19_v1_chr9_-_128469485 AY633624 AY633625 AY633626 BC002326 BC003044	298928	-	AK056493|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##NM_015635|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AB040954|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114937|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114962|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC110990|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AK296381|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##M37191|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AK290060|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AL833042|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633624|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633625|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633626|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC002326|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC003044|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1	0.0	
chr1	151032108	151032252	reg1028210.p2	5.137	+	NM_006818 AK056089	-28	+	TSC_hg19_v1_chr1_-_151032111 BC041604 AK054914 NM_001038707 NM_020239	-77	-	TSC_hg19_v1_chr1_-_151032050 AF187845 AF286592	-137	-	U16954 BC021703 TSC_hg19_v1_chr1_+_151032854 BC032996	592	+	TSC_hg19_v1_chr1_+_151032872 BC009624	689	+	AK057755 TSC_hg19_v1_chr1_+_151032886 BC007079 BC008445	706	+	NM_006818|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##AK056089|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##BC041604|CDC42SE1|56882|CDC42 small effector 1##NM_001038707|CDC42SE1|56882|CDC42 small effector 1##NM_020239|CDC42SE1|56882|CDC42 small effector 1##AF187845|CDC42SE1|56882|CDC42 small effector 1##AF286592|CDC42SE1|56882|CDC42 small effector 1##U16954|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##BC021703|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##BC032996|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##BC009624|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	0.512315	CTCF.p2:-81:0.512
chr17	69081504	69081650	reg1029032.p1	5.137	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-915881	+	BC033038 NM_170742	-980583	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-1010147	+	TSC_hg19_v1_chr17_-_70116937 AL833139	1035361	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	1035582	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	1035593	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.986669	CTCF.p2:-1:0.987
chr13	64324102	64324256	reg1032445.p1	5.136	+	AK289924 NM_022843	-2334525	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-2334926	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-3352700	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	3480325	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	6358362	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	8116080	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.925991	CTCF.p2:-7:0.926
chr4	78980846	78980945	reg1022683.p1	5.136	+	NM_001166133 NM_025074 TSC_hg19_v1_chr4_+_78978757 AK096838	-2155	+	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	-196981	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	-240351	-	BC006366 TSC_hg19_v1_chr4_-_79103287	122390	-	NM_005139 TSC_hg19_v1_chr4_+_79472790	491875	+	TSC_hg19_v1_chr4_+_79472911 BC000871 AK313945	492013	+	NM_001166133|FRAS1|80144|Fraser syndrome 1##NM_025074|FRAS1|80144|Fraser syndrome 1##AK096838|FRAS1|80144|Fraser syndrome 1##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_005139|ANXA3|306|annexin A3##BC000871|ANXA3|306|annexin A3##AK313945|ANXA3|306|annexin A3	0.697678	CTCF.p2:-47:0.637
chr8	113477388	113477518	reg1025847.p1	5.136	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-2490487	-	NM_001099743 NM_001099744	-2773434	-	AK290469 NM_001099745 NM_001099746	-2784220	-	AB114605 NM_198124	911928	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	971676	-	TSC_hg19_v1_chr8_-_116680208 AK304046	3202767	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.95294	CTCF.p2:-17:0.953
chr9	132779119	132779265	reg1025152.p2	5.136	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-181427	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-181470	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-181508	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	26162	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	26296	-	BC039728 NM_001136557 NM_001136558 NM_020960	36792	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chrX	119443466	119443601	reg1026732.p1	5.136	+	TSC_hg19_v1_chrX_+_119384690 AX721150	-58843	+	TSC_hg19_v1_chrX_+_119384666 BC042753 NM_006777 NM_001184742 BX538016 AL833604 AK312321 BX538101	-58947	+	BC113730 BC113732 TSC_hg19_v1_chrX_-_119379092 BC022359 AK093895 AX748357	-64455	-	TSC_hg19_v1_chrX_-_119445289 AK289684 BC047054	1752	-	TSC_hg19_v1_chrX_-_119445320 AF450484 AK056403 NM_001104544 NM_001104545 NM_017938	1820	-	AK309999 NM_001142447 NM_012069 AF158383 AF158384 BC117227 BC143404 BC143406 BC143407 HQ258396	52447	+	BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33##NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33##NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33##BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33##AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33##AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33##BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33##BC113730|NKAPP1|158801|NFKB activating protein pseudogene 1##BC113732|NKAPP1|158801|NFKB activating protein pseudogene 1##BC022359|NKAPP1|158801|NFKB activating protein pseudogene 1##AK093895|NKAPP1|158801|NFKB activating protein pseudogene 1##AK289684|FAM70A|55026|family with sequence similarity 70, member A##BC047054|FAM70A|55026|family with sequence similarity 70, member A##AF450484|FAM70A|55026|family with sequence similarity 70, member A##AK056403|FAM70A|55026|family with sequence similarity 70, member A##NM_001104544|FAM70A|55026|family with sequence similarity 70, member A##NM_001104545|FAM70A|55026|family with sequence similarity 70, member A##NM_017938|FAM70A|55026|family with sequence similarity 70, member A##AK309999|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##NM_001142447|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##NM_012069|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF158383|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF158384|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC117227|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143404|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143406|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143407|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##HQ258396|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	0.0	
chr19	43775376	43775502	reg1032746.p1	5.135	+	CR407605 CU676704 DQ891385 DQ894561 U25987 M34481 M94890 M58591 M34421 X17610 AK300187 AK300229 BC005925 BC020759 AK313256 NM_002784	-1808	-	U18468 U18469 M94891 X17097 BC008405 BC013431 BC063127 NM_002780 NM_213633 AK075149	-65684	-	AB527988 EU831982 EU832075 M73713 M25384 BC012607 NM_001130014 NM_002781	-84817	-	NM_020406 AF146747 AK290965 TSC_hg19_v1_chr19_+_43857837 AJ290452 AJ310433 AK225226 AM884905 BC029167 AY358932 AB237911 AB527936 CU688610 DQ892045 DQ895239 AJ305326 BT020111	82406	+	AF241268 NM_031451	117323	+	NM_001130011 AY014285 AY359077	143611	+	CR407605|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##DQ891385|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##DQ894561|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##U25987|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M34481|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M94890|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M58591|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M34421|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##X17610|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK300187|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK300229|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##BC005925|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##BC020759|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK313256|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##NM_002784|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##U18468|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##U18469|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##M94891|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##X17097|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC013431|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC063127|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##NM_002780|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##NM_213633|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK075149|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##EU831982|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##EU832075|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M73713|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M25384|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##BC012607|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_001130014|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_002781|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_020406|CD177|57126|CD177 molecule##AF146747|CD177|57126|CD177 molecule##AK290965|CD177|57126|CD177 molecule##AJ290452|CD177|57126|CD177 molecule##AJ310433|CD177|57126|CD177 molecule##AK225226|CD177|57126|CD177 molecule##AM884905|CD177|57126|CD177 molecule##BC029167|CD177|57126|CD177 molecule##AY358932|CD177|57126|CD177 molecule##AB237911|CD177|57126|CD177 molecule##DQ892045|CD177|57126|CD177 molecule##DQ895239|CD177|57126|CD177 molecule##AJ305326|CD177|57126|CD177 molecule##BT020111|CD177|57126|CD177 molecule##AF241268|TEX101|83639|testis expressed 101##NM_031451|TEX101|83639|testis expressed 101##NM_001130011|TEX101|83639|testis expressed 101##AY014285|TEX101|83639|testis expressed 101##AY359077|TEX101|83639|testis expressed 101	0.99887	CTCF.p2:-7:0.999
chr7	571613	571793	reg1027602.p1	5.135	+	TSC_hg19_v1_chr7_-_559484 NM_002607 NM_033023	-12218	-	X03795 X06374 TSC_hg19_v1_chr7_-_559093	-12639	-	TSC_hg19_v1_chr7_-_558849 AK292217	-12869	-	AK289464 TSC_hg19_v1_chr7_-_752095 AK297337	180395	-	BC036828 TSC_hg19_v1_chr7_-_752142 AK315951 NM_002735	180444	-	NM_001164762	180873	-	NM_002607|PDGFA|5154|platelet-derived growth factor alpha polypeptide##NM_033023|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X03795|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X06374|PDGFA|5154|platelet-derived growth factor alpha polypeptide##AK292217|PDGFA|5154|platelet-derived growth factor alpha polypeptide##AK289464|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK297337|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##BC036828|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK315951|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_002735|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164762|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta	0.010432	
chr1	213094127	213094242	reg1003697.p1	5.134	+	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	-62504	+	TSC_hg19_v1_chr1_-_213031441 AY030238 AY030239 AK092887	-62720	-	AY640234 BC035742 NM_001024601	-73216	-	TSC_hg19_v1_chr1_+_213123945 AK290973 NM_001136474 NM_001136475 NM_024749 AK022567 AK096605 BC053836 BC051856 BC028194	29733	+	AK302675 TSC_hg19_v1_chr1_+_213124038	29839	+	TSC_hg19_v1_chr1_-_213188830 AK299208	94627	-	AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AY030238|FLVCR1-AS1|642946|FLVCR1 antisense RNA 1 (non-protein coding)##AY030239|FLVCR1-AS1|642946|FLVCR1 antisense RNA 1 (non-protein coding)##AY640234|C1orf227|149643|chromosome 1 open reading frame 227##BC035742|C1orf227|149643|chromosome 1 open reading frame 227##NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227##AK290973|VASH2|79805|vasohibin 2##NM_001136474|VASH2|79805|vasohibin 2##NM_001136475|VASH2|79805|vasohibin 2##NM_024749|VASH2|79805|vasohibin 2##AK022567|VASH2|79805|vasohibin 2##AK096605|VASH2|79805|vasohibin 2##BC053836|VASH2|79805|vasohibin 2##BC051856|VASH2|79805|vasohibin 2##BC028194|VASH2|79805|vasohibin 2##AK302675|VASH2|79805|vasohibin 2##AK299208|ANGEL2|90806|angel homolog 2 (Drosophila)	0.025142	
chr16	66962766	66962890	reg1025397.p1	5.134	+	L24564 BC011645 AK290613 BC057815 NM_001128850 NM_004165	-3400	-	AF016272 AK225544 AK298255 AK225552 AK298334 AK313101 AK075243 AY358911 NM_001204744 NM_001204745 NM_001204746 NM_004062	-10021	-	TSC_hg19_v1_chr16_+_66914417 AK292539 NM_020786 AB037769 BC028030	-48384	+	TSC_hg19_v1_chr16_-_66968283 BC001733 BC005023 AF161467 AF151886 NM_016062	5473	-	TSC_hg19_v1_chr16_+_66968351 BX538086 NM_003869 NM_198061	5510	+	TSC_hg19_v1_chr16_+_66968360 BC032095	5533	+	L24564|RRAD|6236|Ras-related associated with diabetes##BC011645|RRAD|6236|Ras-related associated with diabetes##AK290613|RRAD|6236|Ras-related associated with diabetes##BC057815|RRAD|6236|Ras-related associated with diabetes##NM_001128850|RRAD|6236|Ras-related associated with diabetes##NM_004165|RRAD|6236|Ras-related associated with diabetes##AF016272|CDH16|1014|cadherin 16, KSP-cadherin##AK225544|CDH16|1014|cadherin 16, KSP-cadherin##AK298255|CDH16|1014|cadherin 16, KSP-cadherin##AK225552|CDH16|1014|cadherin 16, KSP-cadherin##AK298334|CDH16|1014|cadherin 16, KSP-cadherin##AK313101|CDH16|1014|cadherin 16, KSP-cadherin##AK075243|CDH16|1014|cadherin 16, KSP-cadherin##AY358911|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204744|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204745|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204746|CDH16|1014|cadherin 16, KSP-cadherin##NM_004062|CDH16|1014|cadherin 16, KSP-cadherin##AK292539|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##NM_020786|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##AB037769|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##BC028030|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##BC001733|FAM96B|51647|family with sequence similarity 96, member B##BC005023|FAM96B|51647|family with sequence similarity 96, member B##AF161467|FAM96B|51647|family with sequence similarity 96, member B##AF151886|FAM96B|51647|family with sequence similarity 96, member B##NM_016062|FAM96B|51647|family with sequence similarity 96, member B##BX538086|CES2|8824|carboxylesterase 2##NM_003869|CES2|8824|carboxylesterase 2##NM_198061|CES2|8824|carboxylesterase 2##BC032095|CES2|8824|carboxylesterase 2	0.298315	CTCF.p2:20:0.276
chr7	114857425	114857503	reg1015669.p1	5.133	+	BC040713 TSC_hg19_v1_chr7_+_114562979 AY196485	-294508	+	TSC_hg19_v1_chr7_+_114562148 AF054589 NM_001166345 NM_001166346 NM_199072	-295290	+	AF467253 NM_001172767 NM_148899 U80741 AF467258 AF467259 TSC_hg19_v1_chr7_+_114066703	-790834	+	AJ608795 NM_001244583	750902	-	TSC_hg19_v1_chr7_-_115670796 D43945 BC029891	813322	-	TSC_hg19_v1_chr7_-_115670820 AK313546	813354	-	BC040713|MDFIC|29969|MyoD family inhibitor domain containing##AY196485|MDFIC|29969|MyoD family inhibitor domain containing##AF054589|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166345|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166346|MDFIC|29969|MyoD family inhibitor domain containing##NM_199072|MDFIC|29969|MyoD family inhibitor domain containing##AF467253|FOXP2|93986|forkhead box P2##NM_001172767|FOXP2|93986|forkhead box P2##NM_148899|FOXP2|93986|forkhead box P2##AF467258|FOXP2|93986|forkhead box P2##AF467259|FOXP2|93986|forkhead box P2##AJ608795|TFEC|22797|transcription factor EC##NM_001244583|TFEC|22797|transcription factor EC##D43945|TFEC|22797|transcription factor EC##BC029891|TFEC|22797|transcription factor EC##AK313546|TFEC|22797|transcription factor EC	0.0	
chr8	48909932	48910047	reg1026026.p2	5.133	+	AK022899 TSC_hg19_v1_chr8_+_48873533 BC031061 AB590735	-36371	+	TSC_hg19_v1_chr8_+_48873513 AK296913	-36476	+	TSC_hg19_v1_chr8_+_48873495 AK309812	-36518	+	TSC_hg19_v1_chr8_+_48920990 BC016332 BC016710 BC007051 AK313447 U62136 AF049140 BC028673 BC062418 NM_003350	10992	+	AK021829 BC025676 BC029586 AK316037 AK299659 AK307101 NM_001142857 NM_024593	737804	-	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	923921	-	AK022899|MCM4|4173|minichromosome maintenance complex component 4##BC031061|MCM4|4173|minichromosome maintenance complex component 4##AK296913|MCM4|4173|minichromosome maintenance complex component 4##AK309812|MCM4|4173|minichromosome maintenance complex component 4##BC016332|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC016710|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC007051|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AK313447|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##U62136|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AF049140|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC028673|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC062418|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##NM_003350|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AK021829|EFCAB1|79645|EF-hand calcium binding domain 1##BC025676|EFCAB1|79645|EF-hand calcium binding domain 1##BC029586|EFCAB1|79645|EF-hand calcium binding domain 1##AK316037|EFCAB1|79645|EF-hand calcium binding domain 1##AK299659|EFCAB1|79645|EF-hand calcium binding domain 1##AK307101|EFCAB1|79645|EF-hand calcium binding domain 1##NM_001142857|EFCAB1|79645|EF-hand calcium binding domain 1##NM_024593|EFCAB1|79645|EF-hand calcium binding domain 1##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)	0.9548	CTCF.p2:0:0.955
chr9	110001940	110002052	reg1027067.p1	5.133	+	TSC_hg19_v1_chr9_+_109686439 CR749850	-315527	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	-376632	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-1545078	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	43536	+	TSC_hg19_v1_chr9_+_110045559 AK125226 AK223479	43561	+	TSC_hg19_v1_chr9_+_110045567 D21090	43606	+	CR749850|ZNF462|58499|zinc finger protein 462##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK125226|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK223479|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##D21090|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.451076	CTCF.p2:-27:0.451
chr9	37386309	37386415	reg1023942.p2	5.133	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-265779	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-265854	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-265876	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	36344	+	BC010007 TSC_hg19_v1_chr9_-_37465267	78898	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	79033	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.982363	CTCF.p2:10:0.982
chr14	67802627	67802756	reg1029397.p2	5.132	+	BC095485 TSC_hg19_v1_chr14_+_67708117 NM_022474 AK291240 AK098373 BC053366 AL832326 BC129933 AL832578 BC037966 AK057160	-94528	+	NM_173526 AK093449 AX748134 AK302154 BC037380 BC050401	-146548	+	AJ272343 TSC_hg19_v1_chr14_+_66975224 AK294532 AK297447 BC030016 DQ892463 DQ895675 AB385462 AJ272033	-827466	+	CU692980 TSC_hg19_v1_chr14_-_67826522 BC001411 AF104629 BC031002 AK315784 AK001155 AF145316 AF077614 AF100741 BC025373 NM_015994	23875	-	TSC_hg19_v1_chr14_+_67827035 NM_004094	24342	+	TSC_hg19_v1_chr14_+_67827053 AK312442 BX161521 AK297244	24359	+	BC095485|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##NM_022474|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK291240|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK098373|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC053366|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832326|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC129933|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832578|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC037966|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##NM_173526|FAM71D|161142|family with sequence similarity 71, member D##AK093449|FAM71D|161142|family with sequence similarity 71, member D##AK302154|FAM71D|161142|family with sequence similarity 71, member D##BC037380|FAM71D|161142|family with sequence similarity 71, member D##BC050401|FAM71D|161142|family with sequence similarity 71, member D##AJ272343|GPHN|10243|gephyrin##AK294532|GPHN|10243|gephyrin##AK297447|GPHN|10243|gephyrin##BC030016|GPHN|10243|gephyrin##DQ892463|GPHN|10243|gephyrin##DQ895675|GPHN|10243|gephyrin##AJ272033|GPHN|10243|gephyrin##BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##NM_004094|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##AK312442|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##BX161521|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##AK297244|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	0.986572	CTCF.p2:5:0.987
chr15	75600538	75600681	reg1026442.p1	5.132	+	AF263742 NM_001145224	-25431	+	AF263742 NM_001164404	-49711	+	TSC_hg19_v1_chr15_+_75494242 AF495726 BC011379 AK125604	-106366	+	NM_017828 AK225716 BC033744 AK000459 AK293708 AK057145 AK124968 AK314740 BC069195 BC068998 AL136872	27785	+	NM_024608 AK026055	38760	+	AB209141 TSC_hg19_v1_chr15_-_75660874	60252	-	AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001145224|GOLGA6D|653643|golgin A6 family, member D##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001164404|GOLGA6C|653641|golgin A6 family, member C##AF495726|C15orf39|56905|chromosome 15 open reading frame 39##BC011379|C15orf39|56905|chromosome 15 open reading frame 39##AK125604|C15orf39|56905|chromosome 15 open reading frame 39##NM_017828|COMMD4|54939|COMM domain containing 4##AK225716|COMMD4|54939|COMM domain containing 4##BC033744|COMMD4|54939|COMM domain containing 4##AK000459|COMMD4|54939|COMM domain containing 4##AK293708|COMMD4|54939|COMM domain containing 4##AK057145|COMMD4|54939|COMM domain containing 4##AK314740|COMMD4|54939|COMM domain containing 4##BC069195|COMMD4|54939|COMM domain containing 4##BC068998|COMMD4|54939|COMM domain containing 4##AL136872|COMMD4|54939|COMM domain containing 4##NM_024608|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)##AK026055|NEIL1|79661|nei endonuclease VIII-like 1 (E. coli)##AB209141|MAN2C1|4123|mannosidase, alpha, class 2C, member 1	0.219942	CTCF.p2:-22:0.220
chr17	15848497	15848609	reg1028942.p2	5.132	+	TSC_hg19_v1_chr17_+_15848443 M97759 BC025722 AB464451 DQ891714 DQ894891 CU693036 AY136748	-61	+	NM_000676 X68487	-323	+	NM_178571 AK292544 AK315847 BC028414 BC047400	-212960	+	BC105128 BC112107 NM_017775 TSC_hg19_v1_chr17_+_15902780 AK056878	54212	+	DQ530600 AB464424 TSC_hg19_v1_chr17_-_15902988 BC094855 BC018807 BC044842 BC089386 BC066344 NM_001042697 NM_001042698	54416	-	TSC_hg19_v1_chr17_+_15903137 AK055780 AK297783 BC073796 BC011698	54604	+	M97759|ADORA2B|136|adenosine A2b receptor##BC025722|ADORA2B|136|adenosine A2b receptor##DQ891714|ADORA2B|136|adenosine A2b receptor##DQ894891|ADORA2B|136|adenosine A2b receptor##AY136748|ADORA2B|136|adenosine A2b receptor##NM_000676|ADORA2B|136|adenosine A2b receptor##X68487|ADORA2B|136|adenosine A2b receptor##NM_178571|TBC1D26|353149|TBC1 domain family, member 26##AK292544|TBC1D28|254272|TBC1 domain family, member 28##AK315847|TBC1D26|353149|TBC1 domain family, member 26##BC028414|TBC1D26|353149|TBC1 domain family, member 26##BC047400|TBC1D26|353149|TBC1 domain family, member 26##BC105128|TTC19|54902|tetratricopeptide repeat domain 19##BC112107|TTC19|54902|tetratricopeptide repeat domain 19##NM_017775|TTC19|54902|tetratricopeptide repeat domain 19##AK056878|TTC19|54902|tetratricopeptide repeat domain 19##DQ530600|ZSWIM7|125150|zinc finger, SWIM-type containing 7##BC094855|ZSWIM7|125150|zinc finger, SWIM-type containing 7##BC018807|ZSWIM7|125150|zinc finger, SWIM-type containing 7##BC044842|ZSWIM7|125150|zinc finger, SWIM-type containing 7##BC089386|ZSWIM7|125150|zinc finger, SWIM-type containing 7##BC066344|ZSWIM7|125150|zinc finger, SWIM-type containing 7##NM_001042697|ZSWIM7|125150|zinc finger, SWIM-type containing 7##NM_001042698|ZSWIM7|125150|zinc finger, SWIM-type containing 7##AK055780|TTC19|54902|tetratricopeptide repeat domain 19##AK297783|TTC19|54902|tetratricopeptide repeat domain 19##BC073796|TTC19|54902|tetratricopeptide repeat domain 19##BC011698|TTC19|54902|tetratricopeptide repeat domain 19	0.40815	CTCF.p2:-20:0.408
chr2	71509741	71509896	reg1025578.p2	5.132	+	TSC_hg19_v1_chr2_+_71503722 AK303723 AK309221 AK293938	-6092	+	TSC_hg19_v1_chr2_-_71454205 AB032981 NM_020459	-55588	-	TSC_hg19_v1_chr2_+_71357768 AK310931 BC041084 X98494	-152033	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	49079	+	NM_001130976 NM_001130977 NM_001130978 NM_001130979 NM_001130980 NM_001130981 NM_003494 AF075575 BC171803 EU515155 EU515156 EU515157 EU515158 EU515159 EU515160	170983	+	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	184075	+	AK303723|ZNF638|27332|zinc finger protein 638##AK309221|ZNF638|27332|zinc finger protein 638##AK293938|ZNF638|27332|zinc finger protein 638##AB032981|PAIP2B|400961|poly(A) binding protein interacting protein 2B##NM_020459|PAIP2B|400961|poly(A) binding protein interacting protein 2B##AK310931|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC041084|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##X98494|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638##NM_001130976|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130977|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130978|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130979|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130980|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130981|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_003494|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AF075575|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##BC171803|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515155|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515156|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515157|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515158|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515159|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515160|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)	1.069038	CTCF.p2:0:0.964
chr5	21459425	21459596	reg1026232.p1	5.132	+	AK295087 BC031051 NM_001167667 NM_004934	-1471188	-	TSC_hg19_v1_chr5_+_17217804 AF039656	-4241670	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-4241898	+	TSC_hg19_v1_chr5_+_21459621 AK290693	99	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	138	+	TSC_hg19_v1_chr5_-_22212879 AK314800	753371	-	AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	0.987355	CTCF.p2:-14:0.987
chr7	142571138	142571266	reg1027663.p2	5.132	+	TSC_hg19_v1_chr7_+_142560518 BC110606 BC110607	-10687	+	TSC_hg19_v1_chr7_+_142552837 NM_004445 D83492 BC015495 BC051028 BC056159	-18477	+	M12426 TSC_hg19_v1_chr7_+_142495248	-76007	+	AF304463 AF365928 AJ243500 AJ243501 AF365927 AK291707 NM_018646 AJ487964	12181	-	BC034740 NM_019841 AF304464	59659	-	BC014596 NM_178829 AB083483 AB083484 AB464498	65457	+	BC110606|EPHB6|2051|EPH receptor B6##BC110607|EPHB6|2051|EPH receptor B6##NM_004445|EPHB6|2051|EPH receptor B6##D83492|EPHB6|2051|EPH receptor B6##BC015495|EPHB6|2051|EPH receptor B6##BC051028|EPHB6|2051|EPH receptor B6##BC056159|EPHB6|2051|EPH receptor B6##AF304463|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AF365928|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AJ243500|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AJ243501|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AF365927|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AK291707|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##NM_018646|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##AJ487964|TRPV6|55503|transient receptor potential cation channel, subfamily V, member 6##BC034740|TRPV5|56302|transient receptor potential cation channel, subfamily V, member 5##NM_019841|TRPV5|56302|transient receptor potential cation channel, subfamily V, member 5##AF304464|TRPV5|56302|transient receptor potential cation channel, subfamily V, member 5##BC014596|C7orf34|135927|chromosome 7 open reading frame 34##NM_178829|C7orf34|135927|chromosome 7 open reading frame 34##AB083483|C7orf34|135927|chromosome 7 open reading frame 34##AB083484|C7orf34|135927|chromosome 7 open reading frame 34	0.944636	CTCF.p2:-10:0.945
chr8	11363929	11364109	reg1024805.p1	5.132	+	S76617 NM_001715 BC018703 BC004473 BC038555	-12426	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-39790	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-159015	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	197701	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	263249	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	296165	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.020838	
chr1	213168763	213168943	reg1003750.p1	5.131	+	AK302675 TSC_hg19_v1_chr1_+_213124038	-44830	+	TSC_hg19_v1_chr1_+_213123945 AK290973 NM_001136474 NM_001136475 NM_024749 AK022567 AK096605 BC053836 BC051856 BC028194	-44936	+	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	-137173	+	TSC_hg19_v1_chr1_-_213188830 AK299208	19958	-	TSC_hg19_v1_chr1_-_213189125 AK294479 AK311276 AK299365 BC047469 AK295116 AF510741 AL079275 NM_144567	20274	-	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	55734	+	AK302675|VASH2|79805|vasohibin 2##AK290973|VASH2|79805|vasohibin 2##NM_001136474|VASH2|79805|vasohibin 2##NM_001136475|VASH2|79805|vasohibin 2##NM_024749|VASH2|79805|vasohibin 2##AK022567|VASH2|79805|vasohibin 2##AK096605|VASH2|79805|vasohibin 2##BC053836|VASH2|79805|vasohibin 2##BC051856|VASH2|79805|vasohibin 2##BC028194|VASH2|79805|vasohibin 2##AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK299208|ANGEL2|90806|angel homolog 2 (Drosophila)##AK294479|ANGEL2|90806|angel homolog 2 (Drosophila)##AK311276|ANGEL2|90806|angel homolog 2 (Drosophila)##AK299365|ANGEL2|90806|angel homolog 2 (Drosophila)##BC047469|ANGEL2|90806|angel homolog 2 (Drosophila)##AK295116|ANGEL2|90806|angel homolog 2 (Drosophila)##AF510741|ANGEL2|90806|angel homolog 2 (Drosophila)##AL079275|ANGEL2|90806|angel homolog 2 (Drosophila)##NM_144567|ANGEL2|90806|angel homolog 2 (Drosophila)##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1	0.0	
chr19	8680747	8680860	reg1027635.p1	5.131	+	TSC_hg19_v1_chr19_-_8675585 AB209515 NM_030957	-5211	-	TSC_hg19_v1_chr19_-_8642338 AB290178	-38405	-	TSC_hg19_v1_chr19_-_8642317 AK301166 AK310058 AB210037 AK131106 NM_012335	-38481	-	AY248901 AK292258 BC024028 TSC_hg19_v1_chr19_-_8809146 BC045752 NM_178525	128309	-	BC137046 BC151149 NM_001004699	160549	+	AK055494 NM_144693	252761	-	AB209515|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##NM_030957|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##AB290178|MYO1F|4542|myosin IF##AK301166|MYO1F|4542|myosin IF##AB210037|MYO1F|4542|myosin IF##AK131106|MYO1F|4542|myosin IF##NM_012335|MYO1F|4542|myosin IF##AY248901|ACTL9|284382|actin-like 9##AK292258|ACTL9|284382|actin-like 9##BC024028|ACTL9|284382|actin-like 9##BC045752|ACTL9|284382|actin-like 9##NM_178525|ACTL9|284382|actin-like 9##BC137046|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##BC151149|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##NM_001004699|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##AK055494|ZNF558|148156|zinc finger protein 558##NM_144693|ZNF558|148156|zinc finger protein 558	0.912396	CTCF.p2:-8:0.912
chr19	8764231	8764412	reg1003738.p2	5.131	+	TSC_hg19_v1_chr19_-_8675585 AB209515 NM_030957	-88729	-	TSC_hg19_v1_chr19_-_8642338 AB290178	-121923	-	TSC_hg19_v1_chr19_-_8642317 AK301166 AK310058 AB210037 AK131106 NM_012335	-121999	-	AY248901 AK292258 BC024028 TSC_hg19_v1_chr19_-_8809146 BC045752 NM_178525	44791	-	BC137046 BC151149 NM_001004699	77031	+	AK055494 NM_144693	169243	-	AB209515|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##NM_030957|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##AB290178|MYO1F|4542|myosin IF##AK301166|MYO1F|4542|myosin IF##AB210037|MYO1F|4542|myosin IF##AK131106|MYO1F|4542|myosin IF##NM_012335|MYO1F|4542|myosin IF##AY248901|ACTL9|284382|actin-like 9##AK292258|ACTL9|284382|actin-like 9##BC024028|ACTL9|284382|actin-like 9##BC045752|ACTL9|284382|actin-like 9##NM_178525|ACTL9|284382|actin-like 9##BC137046|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##BC151149|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##NM_001004699|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##AK055494|ZNF558|148156|zinc finger protein 558##NM_144693|ZNF558|148156|zinc finger protein 558	0.0	
chr20	30161234	30161415	reg1018345.p3	5.131	+	TSC_hg19_v1_chr20_+_30135200 BC053868	-26090	+	TSC_hg19_v1_chr20_+_30102316 AJ420895 DQ896206 CU687568 AF515663	-58991	+	AF172086 BC062595 TSC_hg19_v1_chr20_+_30102287 AF483215 AJ345029 AK074686	-59043	+	TSC_hg19_v1_chr20_+_30193091 NM_002165 NM_181353 AK313786 BC012420 BC000613 S78986 X77956 AK291152 D13889 D13890 S78825 AB463776 CU680316 DQ891293 DQ893342 DQ894477 DQ896657 EU176458 EU176468 EU176808 BT007443	31812	+	AF257180 NM_032609 BC057779	64378	+	BC032024 TSC_hg19_v1_chr20_-_30288101	126773	-	AJ420895|HM13|81502|histocompatibility (minor) 13##DQ896206|HM13|81502|histocompatibility (minor) 13##AF515663|HM13|81502|histocompatibility (minor) 13##AF172086|HM13|81502|histocompatibility (minor) 13##BC062595|HM13|81502|histocompatibility (minor) 13##AF483215|HM13|81502|histocompatibility (minor) 13##AJ345029|HM13|81502|histocompatibility (minor) 13##AK074686|HM13|81502|histocompatibility (minor) 13##NM_002165|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##NM_181353|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK313786|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC012420|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC000613|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78986|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##X77956|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK291152|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13889|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13890|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78825|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ891293|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ893342|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ894477|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ896657|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176458|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176468|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176808|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BT007443|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AF257180|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_032609|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##BC057779|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)	0.0	
chr3	63647077	63647181	reg1028399.p1	5.131	+	NM_001080537 AK126350	-8771	+	NM_144642 AK315958 AK312465	-218330	+	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	-383212	+	TSC_hg19_v1_chr3_-_63849482 CU688000 CR457373 BC065012 AK225110	202343	-	TSC_hg19_v1_chr3_-_63849703 AK027098 AF104914 NM_025075	202527	-	TSC_hg19_v1_chr3_+_63850212 AF032104 AF032105 NM_000333 AJ000517	203079	+	NM_001080537|SNTN|132203|sentan, cilia apical structure protein##AK126350|SNTN|132203|sentan, cilia apical structure protein##NM_144642|SYNPR|132204|synaptoporin##AK315958|SYNPR|132204|synaptoporin##AK312465|SYNPR|132204|synaptoporin##NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin##CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)##BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)##AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)##AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)##AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)##NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)##AF032104|ATXN7|6314|ataxin 7##AF032105|ATXN7|6314|ataxin 7##NM_000333|ATXN7|6314|ataxin 7##AJ000517|ATXN7|6314|ataxin 7	0.372449	CTCF.p2:-6:0.372
chr5	14108896	14109077	reg1008656.p2	5.131	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-97116	-	AX800026 AY045575 NM_001369	-164398	-	TSC_hg19_v1_chr5_-_11904184 AK296232	-2204802	-	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	34686	+	TSC_hg19_v1_chr5_+_14488527 AK131423	379553	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	472914	+	AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A	0.0	
chr8	33663382	33663506	reg1028706.p2	5.131	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-205949	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	-205985	-	TSC_hg19_v1_chr8_-_33457295 BC067804	-206157	-	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	1429543	+	NM_001031836 AK302391 BC028701	2978426	+	TSC_hg19_v1_chr8_-_37457377 AK025743	3793924	-	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC067804|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AK025743|LOC157860|157860|uncharacterized LOC157860	0.228933	CTCF.p2:0:0.229
chr10	224326	224461	reg1030683.p1	5.130	+	TSC_hg19_v1_chr10_+_181412 BC091489 NM_001202464	-42973	+	NM_006624 NM_001202465 NM_001202466 NM_212479 TSC_hg19_v1_chr10_+_180423	-43980	+	BC101270 BC101271 NM_177987	-129220	-	BC012586 X86098 NM_001202467 NM_001202468 AB385196 DQ335452 DQ335453 DQ335454 DQ335455 AK296427	1553	+	AK096000 BC144473 AK296168 TSC_hg19_v1_chr10_+_696010 AK096013	471558	+	TSC_hg19_v1_chr10_-_735609 AB023151 BC063313 NM_014974	511298	-	BC091489|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202464|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202465|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202466|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11##BC101270|TUBB8|347688|tubulin, beta 8 class VIII##BC101271|TUBB8|347688|tubulin, beta 8 class VIII##NM_177987|TUBB8|347688|tubulin, beta 8 class VIII##BC012586|ZMYND11|10771|zinc finger, MYND-type containing 11##X86098|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202467|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202468|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335452|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335453|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335454|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335455|ZMYND11|10771|zinc finger, MYND-type containing 11##AK296427|ZMYND11|10771|zinc finger, MYND-type containing 11##AK096000|C10orf108|414235|chromosome 10 open reading frame 108##AK296168|C10orf108|414235|chromosome 10 open reading frame 108##AK096013|C10orf108|414235|chromosome 10 open reading frame 108##AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)	0.013107	
chr1	109734088	109734194	reg1028786.p2	5.130	+	BC125208 TSC_hg19_v1_chr1_+_109656794 AK297221 AK297478 AK304003	-77354	+	TSC_hg19_v1_chr1_+_109656726 AK057647	-77415	+	TSC_hg19_v1_chr1_+_109656574 NM_020775	-77541	+	TSC_hg19_v1_chr1_+_109756523 NM_006513	22358	+	BC111398 X91257 TSC_hg19_v1_chr1_+_109756539	22398	+	TSC_hg19_v1_chr1_+_109756553 AK222677 AK312771	22409	+	BC125208|KIAA1324|57535|KIAA1324##AK297221|KIAA1324|57535|KIAA1324##AK297478|KIAA1324|57535|KIAA1324##AK304003|KIAA1324|57535|KIAA1324##AK057647|KIAA1324|57535|KIAA1324##NM_020775|KIAA1324|57535|KIAA1324##NM_006513|SARS|6301|seryl-tRNA synthetase##BC111398|SARS|6301|seryl-tRNA synthetase##X91257|SARS|6301|seryl-tRNA synthetase##AK222677|SARS|6301|seryl-tRNA synthetase##AK312771|SARS|6301|seryl-tRNA synthetase	0.020002	
chr2	129472443	129472604	reg1028626.p1	5.130	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-396223	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-544476	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-623662	+	NM_032144 AL136727	1264712	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	1414335	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	1430088	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.927332	CTCF.p2:13:0.927
chr21	37907973	37908153	reg1019264.p1	5.130	+	AF314090 AY355348 NM_001146079 NM_144492	-55676	-	BC012126 NM_012130 AY355349	-69332	-	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	-150373	+	AJ566765 NM_001146078	6834	-	AJ566766 NM_001146077	40803	-	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	163377	+	AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AJ566765|CLDN14|23562|claudin 14##NM_001146078|CLDN14|23562|claudin 14##AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14	0.0	
chr21	43632101	43632214	reg1029091.p1	5.130	+	AF323660 NM_207627 AF323661 NM_207628	-12298	+	AB096965 AY771619 AY771620 NM_001004416 NM_173568	-140732	+	AB051810 AB051811 NM_001199527 NM_001199528	-149090	+	AF323662 NM_207629	4029	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	7136	+	AK298491 AF323664 NM_207174	7811	+	AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AF323662|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207629|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK298491|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323664|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207174|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	0.428114	CTCF.p2:-5:0.428
chr3	108208848	108209002	reg1001373.p2	5.130	+	BC035971 NM_007072	-187594	+	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	-193524	+	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	-267633	-	AB023217 NM_014981	39243	-	AB463087 AM393250 HQ258525 BC082961 TSC_hg19_v1_chr3_-_108308269 BC130564 BC136371 BC063433 AL713689 AF334474 AK056933 AK308315	99335	-	NM_014648 TSC_hg19_v1_chr3_+_108308395	99440	+	BC035971|HHLA2|11148|HERV-H LTR-associating 2##NM_007072|HHLA2|11148|HERV-H LTR-associating 2##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AB023217|MYH15|22989|myosin, heavy chain 15##NM_014981|MYH15|22989|myosin, heavy chain 15##AM393250|KIAA1524|57650|KIAA1524##BC082961|KIAA1524|57650|KIAA1524##BC130564|KIAA1524|57650|KIAA1524##BC136371|KIAA1524|57650|KIAA1524##BC063433|KIAA1524|57650|KIAA1524##AL713689|KIAA1524|57650|KIAA1524##AF334474|KIAA1524|57650|KIAA1524##AK056933|KIAA1524|57650|KIAA1524##AK308315|KIAA1524|57650|KIAA1524##NM_014648|DZIP3|9666|DAZ interacting protein 3, zinc finger	0.0	
chr4	103664654	103664773	reg1028249.p2	5.130	+	TSC_hg19_v1_chr4_+_103422822 AK291450	-241890	+	TSC_hg19_v1_chr4_+_103422737 M55643	-241951	+	TSC_hg19_v1_chr4_+_103422554 M58603	-242158	+	EU009130 TSC_hg19_v1_chr4_-_103682110 AK300015 AB209846 AK312827	17373	-	TSC_hg19_v1_chr4_-_103682126 U60337 AK291598 BC015743	17422	-	NM_005908 TSC_hg19_v1_chr4_-_103682152	17451	-	AK291450|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##M55643|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##M58603|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##EU009130|MANBA|4126|mannosidase, beta A, lysosomal##AK300015|MANBA|4126|mannosidase, beta A, lysosomal##AB209846|MANBA|4126|mannosidase, beta A, lysosomal##AK312827|MANBA|4126|mannosidase, beta A, lysosomal##U60337|MANBA|4126|mannosidase, beta A, lysosomal##AK291598|MANBA|4126|mannosidase, beta A, lysosomal##BC015743|MANBA|4126|mannosidase, beta A, lysosomal##NM_005908|MANBA|4126|mannosidase, beta A, lysosomal	0.0	
chr9	2645760	2645881	reg1025737.p2	5.130	+	AK092381 AX747508 TSC_hg19_v1_chr9_+_2622134 AB590563 D16494	-23659	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	-23708	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	-23746	+	BC101352 BC101353 NM_133497	71705	+	TSC_hg19_v1_chr9_-_2844074 AK292169 BC020598	198252	-	TSC_hg19_v1_chr9_-_2844084 AL832245 AK225953 AL832239	198269	-	AK092381|VLDLR|7436|very low density lipoprotein receptor##D16494|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##BC101352|KCNV2|169522|potassium channel, subfamily V, member 2##BC101353|KCNV2|169522|potassium channel, subfamily V, member 2##NM_133497|KCNV2|169522|potassium channel, subfamily V, member 2##AK292169|KIAA0020|9933|KIAA0020##AL832245|KIAA0020|9933|KIAA0020##AK225953|KIAA0020|9933|KIAA0020##AL832239|KIAA0020|9933|KIAA0020	0.0	
chrX	104435079	104435177	reg1022626.p2	5.130	+	TSC_hg19_v1_chrX_+_103810991 AJ272208 NM_017416	-624136	+	AK290196 TSC_hg19_v1_chrX_+_103810879	-624249	+	BC042633 AY114148 BC053599 NM_153448 AK097704	-935542	-	BC108734 AF285597 BC042547 NM_031274	30225	-	TSC_hg19_v1_chrX_+_105066535 BX538345 NM_198465 BC108702	631410	+	TSC_hg19_v1_chrX_+_105066559 AK131549	631438	+	AJ272208|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##NM_017416|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##AK290196|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##BC042633|ESX1|80712|ESX homeobox 1##AY114148|ESX1|80712|ESX homeobox 1##BC053599|ESX1|80712|ESX homeobox 1##NM_153448|ESX1|80712|ESX homeobox 1##AK097704|ESX1|80712|ESX homeobox 1##BC108734|TEX13A|56157|testis expressed 13A##AF285597|TEX13A|56157|testis expressed 13A##BC042547|TEX13A|56157|testis expressed 13A##NM_031274|TEX13A|56157|testis expressed 13A##BX538345|NRK|203447|Nik related kinase##NM_198465|NRK|203447|Nik related kinase##BC108702|NRK|203447|Nik related kinase##AK131549|NRK|203447|Nik related kinase	0.975272	CTCF.p2:-9:0.975
chr1	171711201	171711353	reg1026785.p1	5.129	+	BC005974 TSC_hg19_v1_chr1_-_171711206 AL035296 AK290441 AF044310 BC031264 BC007019 NM_001185127 NM_003762	-42	-	AB528547 DQ892415 DQ895629 AF001620 FJ227302 FJ237046 FJ237047 NM_000261 U85257 D88214 BC029261 AK300924 AK300943 AK301297 AK315443 AK097310	-89477	-	AF253978 AL096857 TSC_hg19_v1_chr1_+_171481269 AF488829	-230025	+	AK092254 TSC_hg19_v1_chr1_+_171711293	10	+	NM_001007239 NM_014955 NM_015935 TSC_hg19_v1_chr1_+_171750799 AK304471 AK223493	39503	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	39537	+	BC005974|VAMP4|8674|vesicle-associated membrane protein 4##AL035296|VAMP4|8674|vesicle-associated membrane protein 4##AK290441|VAMP4|8674|vesicle-associated membrane protein 4##AF044310|VAMP4|8674|vesicle-associated membrane protein 4##BC031264|VAMP4|8674|vesicle-associated membrane protein 4##BC007019|VAMP4|8674|vesicle-associated membrane protein 4##NM_001185127|VAMP4|8674|vesicle-associated membrane protein 4##NM_003762|VAMP4|8674|vesicle-associated membrane protein 4##DQ892415|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##DQ895629|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AF001620|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ227302|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ237046|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##FJ237047|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##NM_000261|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##U85257|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##D88214|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##BC029261|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK300924|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK300943|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK301297|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK315443|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AK097310|MYOC|4653|myocilin, trabecular meshwork inducible glucocorticoid response##AF253978|PRRC2C|23215|proline-rich coiled-coil 2C##AL096857|PRRC2C|23215|proline-rich coiled-coil 2C##AF488829|PRRC2C|23215|proline-rich coiled-coil 2C##NM_001007239|METTL13|51603|methyltransferase like 13##NM_014955|METTL13|51603|methyltransferase like 13##NM_015935|METTL13|51603|methyltransferase like 13##AK304471|METTL13|51603|methyltransferase like 13##AK223493|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13	0.0	
chr13	85491525	85491636	reg1026787.p1	5.129	+	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-1035080	-	TSC_hg19_v1_chr13_-_84456424 BC051738	-1035155	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-4576516	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	881859	-	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	2833289	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	6559324	+	AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5	0.459235	CTCF.p2:3:0.459
chr15	30435444	30435584	reg1028708.p1	5.129	+	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-320891	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-321172	-	NM_015307	-572588	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	250198	-	TSC_hg19_v1_chr15_+_30918372 BC071990	482872	+	BC105788 NM_001039841	483364	+	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B	0.835639	CTCF.p2:-12:0.836
chr17	7761896	7762006	reg1027956.p2	5.129	+	TSC_hg19_v1_chr17_+_7761320 BC060779 AK289520	-606	+	BC033861 NM_032356 BC051846 TSC_hg19_v1_chr17_-_7761246	-743	-	AK057061 NM_144607	-888	+	TSC_hg19_v1_chr17_+_7788113 NM_001005271	26160	+	TSC_hg19_v1_chr17_+_7792039 AF006515 NM_001005273 NM_005852 U91543	30150	+	TSC_hg19_v1_chr17_+_7812703 AK096555	50809	+	BC060779|CYB5D1|124637|cytochrome b5 domain containing 1##AK289520|CYB5D1|124637|cytochrome b5 domain containing 1##BC033861|LSMD1|84316|LSM domain containing 1##NM_032356|LSMD1|84316|LSM domain containing 1##BC051846|LSMD1|84316|LSM domain containing 1##AK057061|CYB5D1|124637|cytochrome b5 domain containing 1##NM_144607|CYB5D1|124637|cytochrome b5 domain containing 1##NM_001005271|CHD3|1107|chromodomain helicase DNA binding protein 3##NM_001005273|CHD3|1107|chromodomain helicase DNA binding protein 3##NM_005852|CHD3|1107|chromodomain helicase DNA binding protein 3##U91543|CHD3|1107|chromodomain helicase DNA binding protein 3##AK096555|CHD3|1107|chromodomain helicase DNA binding protein 3	0.0	
chr8	109508931	109509020	reg1026067.p1	5.129	+	TSC_hg19_v1_chr8_+_109455874 AK290974 D14659 AB384437 CR457402 CU676696 CU692380 HQ447150	-53095	+	TSC_hg19_v1_chr8_+_109455865 BC021667 NM_014673 AK222615 BC007027 BC020753	-53123	+	TSC_hg19_v1_chr8_-_109260947 BC017887 AK313186 BC005944 BC016706 BC021679 U94175 U62962 BC008419 NM_001568 AK310902	-247990	-	AK055230 NM_153015 BC033057 BC030710	290831	-	BC105045 BC113360 NM_003301 X72089 D16845 AY493373 HQ258206 X75071	590721	+	AF283302 AK311583 AF521133 NM_001128211 AK307663	833159	-	AK290974|TTC35|9694|tetratricopeptide repeat domain 35##D14659|TTC35|9694|tetratricopeptide repeat domain 35##CR457402|TTC35|9694|tetratricopeptide repeat domain 35##HQ447150|TTC35|9694|tetratricopeptide repeat domain 35##BC021667|TTC35|9694|tetratricopeptide repeat domain 35##NM_014673|TTC35|9694|tetratricopeptide repeat domain 35##AK222615|TTC35|9694|tetratricopeptide repeat domain 35##BC007027|TTC35|9694|tetratricopeptide repeat domain 35##BC020753|TTC35|9694|tetratricopeptide repeat domain 35##BC017887|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK313186|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC005944|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC016706|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC021679|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U94175|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U62962|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC008419|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##NM_001568|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK310902|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK055230|TMEM74|157753|transmembrane protein 74##NM_153015|TMEM74|157753|transmembrane protein 74##BC030710|TMEM74|157753|transmembrane protein 74##BC105045|TRHR|7201|thyrotropin-releasing hormone receptor##BC113360|TRHR|7201|thyrotropin-releasing hormone receptor##NM_003301|TRHR|7201|thyrotropin-releasing hormone receptor##X72089|TRHR|7201|thyrotropin-releasing hormone receptor##D16845|TRHR|7201|thyrotropin-releasing hormone receptor##AY493373|TRHR|7201|thyrotropin-releasing hormone receptor##HQ258206|TRHR|7201|thyrotropin-releasing hormone receptor##X75071|TRHR|7201|thyrotropin-releasing hormone receptor##AF283302|NUDCD1|84955|NudC domain containing 1##AK311583|NUDCD1|84955|NudC domain containing 1##AF521133|NUDCD1|84955|NudC domain containing 1##NM_001128211|NUDCD1|84955|NudC domain containing 1##AK307663|NUDCD1|84955|NudC domain containing 1	0.010734	
chr19	17190676	17190856	reg1007026.p3	5.128	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-4173	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-4445	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-53226	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	135406	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	135439	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	146268	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.0	
chr2	44522980	44523085	reg1027522.p1	5.128	+	NM_000341 BC022386 AK309145 AK313157 AB033549 AK091932 AK289636 L11696 M95548 AK223146 BC093624 BC093626 D82326 CU692594 DQ892031 DQ895222 DQ023513 DQ023515 DQ023516 DQ023517	-20397	+	TSC_hg19_v1_chr2_+_44396066 AL833035	-126922	+	TSC_hg19_v1_chr2_+_44396013 NM_001033556 NM_001033557 NM_002706 NM_177968 NM_177969 AK056009 AK291214 DQ023508 DQ023509 DQ023510 DQ023511 BC064381 AJ271832 AJ271835 BC012002	-127017	+	BC143061 BC143062 DQ023506 DQ023507 NM_001042385 NM_001042386	63838	-	DQ023503 DQ023504 DQ023505 NM_006036	64780	-	AB007896 TSC_hg19_v1_chr2_-_44588634 BC151236 AK025649 NM_001171606 NM_001171613	65648	-	NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AL833035|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_001033556|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_001033557|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_002706|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177968|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177969|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK056009|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK291214|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023508|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023509|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023510|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023511|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC064381|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271832|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271835|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC012002|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC143061|PREPL|9581|prolyl endopeptidase-like##BC143062|PREPL|9581|prolyl endopeptidase-like##DQ023506|PREPL|9581|prolyl endopeptidase-like##DQ023507|PREPL|9581|prolyl endopeptidase-like##NM_001042385|PREPL|9581|prolyl endopeptidase-like##NM_001042386|PREPL|9581|prolyl endopeptidase-like##DQ023503|PREPL|9581|prolyl endopeptidase-like##DQ023504|PREPL|9581|prolyl endopeptidase-like##DQ023505|PREPL|9581|prolyl endopeptidase-like##NM_006036|PREPL|9581|prolyl endopeptidase-like##AB007896|PREPL|9581|prolyl endopeptidase-like##BC151236|PREPL|9581|prolyl endopeptidase-like##AK025649|PREPL|9581|prolyl endopeptidase-like##NM_001171606|PREPL|9581|prolyl endopeptidase-like##NM_001171613|PREPL|9581|prolyl endopeptidase-like	0.0	
chr7	18733163	18733292	reg1032022.p1	5.128	+	TSC_hg19_v1_chr7_+_18548965 AK304343	-184258	+	NM_001204147 NM_001204148 TSC_hg19_v1_chr7_+_18548932 AK304410	-184304	+	CR749550 EU832154 EU832248 TSC_hg19_v1_chr7_+_18535882 NM_058176 NM_178425 AB385379 AY032737 AY032738 AY197371 EU832247 BC111735	-197356	+	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	424051	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	451786	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	1015419	-	AK304343|HDAC9|9734|histone deacetylase 9##NM_001204147|HDAC9|9734|histone deacetylase 9##NM_001204148|HDAC9|9734|histone deacetylase 9##AK304410|HDAC9|9734|histone deacetylase 9##CR749550|HDAC9|9734|histone deacetylase 9##EU832154|HDAC9|9734|histone deacetylase 9##EU832248|HDAC9|9734|histone deacetylase 9##NM_058176|HDAC9|9734|histone deacetylase 9##NM_178425|HDAC9|9734|histone deacetylase 9##AY032737|HDAC9|9734|histone deacetylase 9##AY032738|HDAC9|9734|histone deacetylase 9##AY197371|HDAC9|9734|histone deacetylase 9##EU832247|HDAC9|9734|histone deacetylase 9##BC111735|HDAC9|9734|histone deacetylase 9##BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor	0.676009	CTCF.p2:-10:0.676
chr8	77590247	77590351	reg1026834.p2	5.128	+	BX571750 NM_004133 EU832451 HQ692842	-1138085	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	-1270111	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-1693390	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	3211	+	AB083343 TSC_hg19_v1_chr8_+_77593533	3229	+	AK131399 TSC_hg19_v1_chr8_+_77765961	175590	+	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4##AB083343|ZFHX4|79776|zinc finger homeobox 4##AK131399|ZFHX4|79776|zinc finger homeobox 4	0.026271	
chr14	32852082	32852196	reg1028795.p1	5.127	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-53603	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-305633	+	TSC_hg19_v1_chr14_+_32546223 BC075799	-305894	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	556351	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	1568010	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	2079348	-	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A	0.013453	
chr17	27894859	27894981	reg1025462.p1	5.127	+	TSC_hg19_v1_chr17_-_27894056 BC012476 NM_198147 AY358212	-896	-	TSC_hg19_v1_chr17_-_27893539 AK056717	-1376	-	NM_020791 NM_025142 BC133039 BC144067	-176975	+	TSC_hg19_v1_chr17_+_27895730 AB110209 AK075341	787	+	BC001593 NM_138349 TSC_hg19_v1_chr17_+_27895738	818	+	AB384970 AF124490 AB209537 AK299932 TSC_hg19_v1_chr17_-_27916543	21550	-	BC012476|ABHD15|116236|abhydrolase domain containing 15##NM_198147|ABHD15|116236|abhydrolase domain containing 15##AY358212|ABHD15|116236|abhydrolase domain containing 15##AK056717|ABHD15|116236|abhydrolase domain containing 15##NM_020791|TAOK1|57551|TAO kinase 1##NM_025142|TAOK1|57551|TAO kinase 1##BC133039|TAOK1|57551|TAO kinase 1##BC144067|TAOK1|57551|TAO kinase 1##AB110209|TP53I13|90313|tumor protein p53 inducible protein 13##AK075341|TP53I13|90313|tumor protein p53 inducible protein 13##BC001593|TP53I13|90313|tumor protein p53 inducible protein 13##NM_138349|TP53I13|90313|tumor protein p53 inducible protein 13##AF124490|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AB209537|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AK299932|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1	0.095767	
chr18	39633289	39633408	reg1026751.p1	5.127	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-98115	+	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	-98149	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-2253080	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	1062221	-	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	1224081	-	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	2626766	+	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK090603|LOC647946|647946|uncharacterized LOC647946##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1	0.987264	CTCF.p2:-8:0.987
chr4	122033890	122034047	reg1016140.p2	5.127	+	BC019351 AK289615 NM_024574 TSC_hg19_v1_chr4_-_121993690	-40338	-	TSC_hg19_v1_chr4_-_121843992 AB464059 BC121037 BC121038 AK314293 AK310958 AF272897 AK056352 NM_018699 BC066942	-189973	-	EU831987 EU832080 AB528692 AF394735 TSC_hg19_v1_chr4_-_120987954 U65410 BC070283 AJ000186 BC005945 BC000356 U31278 AK223433 AK313827 AK298228 NM_002358	-1046014	-	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	51516	-	AK301058 NM_001128843	103813	-	AK303192 NM_001244764	114652	-	BC019351|NDNF|79625|neuron-derived neurotrophic factor##AK289615|NDNF|79625|neuron-derived neurotrophic factor##NM_024574|NDNF|79625|neuron-derived neurotrophic factor##BC121037|PRDM5|11107|PR domain containing 5##BC121038|PRDM5|11107|PR domain containing 5##AK314293|PRDM5|11107|PR domain containing 5##AK310958|PRDM5|11107|PR domain containing 5##AF272897|PRDM5|11107|PR domain containing 5##AK056352|PRDM5|11107|PR domain containing 5##NM_018699|PRDM5|11107|PR domain containing 5##BC066942|PRDM5|11107|PR domain containing 5##EU831987|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##EU832080|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF394735|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC070283|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AJ000186|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC005945|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC000356|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK223433|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK313827|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK298228|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##NM_002358|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3##AK301058|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001128843|TNIP3|79931|TNFAIP3 interacting protein 3##AK303192|TNIP3|79931|TNFAIP3 interacting protein 3##NM_001244764|TNIP3|79931|TNFAIP3 interacting protein 3	0.0	
chr10	61590505	61590644	reg1027193.p1	5.126	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-120850	-	AK299924 NM_001143773	-467914	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-468289	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	75627	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	75750	-	AK292927 AK092527 NM_001149	310142	-	AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.997297	CTCF.p2:-1:0.997
chr11	616098	616278	reg1021513.p2	5.126	+	NM_001572 NM_004029 TSC_hg19_v1_chr11_-_616001	-187	-	U53830 U53831 U53832 U73036 TSC_hg19_v1_chr11_-_615951 AK303752	-252	-	AF076494 NM_004031	-500	-	AF276242 AF301909 TSC_hg19_v1_chr11_-_624945 AY358368 BC038405 AK000226 AK300991 AK308040 AK309157 AK000384 NM_001171968 NM_021924 NM_031264 AF258678 AF258679	8846	-	NM_021920	10984	-	TSC_hg19_v1_chr11_+_637268 EU432112 L12398 NM_000797 S76942	21098	+	NM_001572|IRF7|3665|interferon regulatory factor 7##NM_004029|IRF7|3665|interferon regulatory factor 7##U53830|IRF7|3665|interferon regulatory factor 7##U53831|IRF7|3665|interferon regulatory factor 7##U53832|IRF7|3665|interferon regulatory factor 7##U73036|IRF7|3665|interferon regulatory factor 7##AK303752|IRF7|3665|interferon regulatory factor 7##AF076494|IRF7|3665|interferon regulatory factor 7##NM_004031|IRF7|3665|interferon regulatory factor 7##AF276242|CDHR5|53841|cadherin-related family member 5##AF301909|CDHR5|53841|cadherin-related family member 5##AY358368|CDHR5|53841|cadherin-related family member 5##BC038405|CDHR5|53841|cadherin-related family member 5##AK000226|CDHR5|53841|cadherin-related family member 5##AK300991|CDHR5|53841|cadherin-related family member 5##AK308040|CDHR5|53841|cadherin-related family member 5##AK309157|CDHR5|53841|cadherin-related family member 5##AK000384|CDHR5|53841|cadherin-related family member 5##NM_001171968|CDHR5|53841|cadherin-related family member 5##NM_021924|CDHR5|53841|cadherin-related family member 5##NM_031264|CDHR5|53841|cadherin-related family member 5##AF258678|CDHR5|53841|cadherin-related family member 5##AF258679|CDHR5|53841|cadherin-related family member 5##NM_021920|SCT|6343|secretin##EU432112|DRD4|1815|dopamine receptor D4##L12398|DRD4|1815|dopamine receptor D4##NM_000797|DRD4|1815|dopamine receptor D4##S76942|DRD4|1815|dopamine receptor D4	0.0	
chr14	24740876	24741020	reg1023292.p2	5.126	+	TSC_hg19_v1_chr14_-_24740802 NM_182836	-151	-	TSC_hg19_v1_chr14_-_24740785 AK291347	-165	-	TSC_hg19_v1_chr14_-_24740748 NM_004581 BC003093	-190	-	AK058159 NM_138452	27717	-	BC015943 AL833917 BC014057 TSC_hg19_v1_chr14_-_24768965 BX247980 AF418205 NM_001136050	27991	-	TSC_hg19_v1_chr14_+_24769078 AB095941 BC025332 BX647311 BX248018 NM_174913	28139	+	NM_182836|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##AK291347|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##NM_004581|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##BC003093|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##AK058159|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##NM_138452|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##BC015943|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##AL833917|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##BC014057|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##BX247980|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##AF418205|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##NM_001136050|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##AB095941|C14orf21|161424|chromosome 14 open reading frame 21##BC025332|C14orf21|161424|chromosome 14 open reading frame 21##BX647311|C14orf21|161424|chromosome 14 open reading frame 21##BX248018|C14orf21|161424|chromosome 14 open reading frame 21##NM_174913|C14orf21|161424|chromosome 14 open reading frame 21	0.01958	
chr2	11970490	11970671	reg1012905.p4	5.126	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-83805	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-160289	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-287737	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	886673	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	887336	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	887817	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.0	
chr22	38039546	38039667	reg1003088.p2	5.126	+	TSC_hg19_v1_chr22_+_38035718 CR456576 AB463257 CU013175 CU013463	-3847	+	TSC_hg19_v1_chr22_+_38035696 AK301163	-3902	+	NM_018957 TSC_hg19_v1_chr22_+_38035684	-3922	+	TSC_hg19_v1_chr22_+_38054751 BC064922 NM_020315 BC000320 BC018844 AY125047	15139	+	CR456511 NM_002305 EU363770 AK312161 BC020675 TSC_hg19_v1_chr22_+_38071644 AL832117 D28452 BC001693 AB097036 J04456 X15256 X14829	32051	+	TSC_hg19_v1_chr22_+_38082360 NM_024313 AK057139 AK294700 AK316443 BC002808 AK310084 AL160132 CR456463 AB528193 CU012996 CU013284 DQ278603	42769	+	CR456576|SH3BP1|23616|SH3-domain binding protein 1##CU013175|SH3BP1|23616|SH3-domain binding protein 1##CU013463|SH3BP1|23616|SH3-domain binding protein 1##AK301163|SH3BP1|23616|SH3-domain binding protein 1##NM_018957|SH3BP1|23616|SH3-domain binding protein 1##BC064922|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##NM_020315|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##BC000320|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##BC018844|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##AY125047|PDXP|57026|pyridoxal (pyridoxine, vitamin B6) phosphatase##CR456511|LGALS1|3956|lectin, galactoside-binding, soluble, 1##NM_002305|LGALS1|3956|lectin, galactoside-binding, soluble, 1##EU363770|LGALS1|3956|lectin, galactoside-binding, soluble, 1##AK312161|LGALS1|3956|lectin, galactoside-binding, soluble, 1##BC020675|LGALS1|3956|lectin, galactoside-binding, soluble, 1##AL832117|LGALS1|3956|lectin, galactoside-binding, soluble, 1##D28452|LGALS1|3956|lectin, galactoside-binding, soluble, 1##BC001693|LGALS1|3956|lectin, galactoside-binding, soluble, 1##AB097036|LGALS1|3956|lectin, galactoside-binding, soluble, 1##J04456|LGALS1|3956|lectin, galactoside-binding, soluble, 1##X15256|LGALS1|3956|lectin, galactoside-binding, soluble, 1##X14829|LGALS1|3956|lectin, galactoside-binding, soluble, 1##NM_024313|NOL12|79159|nucleolar protein 12##AK057139|NOL12|79159|nucleolar protein 12##AK294700|NOL12|79159|nucleolar protein 12##AK316443|NOL12|79159|nucleolar protein 12##BC002808|NOL12|79159|nucleolar protein 12##AL160132|NOL12|79159|nucleolar protein 12##CR456463|NOL12|79159|nucleolar protein 12	0.0	
chr4	36826473	36826653	reg1024958.p2	5.125	+	BC157885 NM_001170700	-540920	+	AK131492 NM_001136536 AK304357 AK316523	-543317	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	-580526	-	NM_001144990	420126	+	NM_001104629 BC037906	629012	+	AK001879 NM_018302 AK225192	759306	+	BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_001144990|KIAA1239|57495|KIAA1239##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19	0.060516	
chr5	34839185	34839365	reg1027710.p1	5.125	+	AY354204 NM_001145523	-151612	+	AK308306 NM_001145521 NM_001145525 BC028681 AY317139	-154641	+	AB037755 NM_001145520 TSC_hg19_v1_chr5_+_34656599	-182678	+	AK058168 NM_144725 AK293829 BC032871 BC057775 AK097766	22	+	AF074717 TSC_hg19_v1_chr5_-_34915671 BC009804 AJ004974 AJ004975 BC006837 AF073524 AF076841 AF090170 AF084512 AF084513 AF011905	76355	-	TSC_hg19_v1_chr5_-_34915716 AK002112 NM_002853	76471	-	AY354204|RAI14|26064|retinoic acid induced 14##NM_001145523|RAI14|26064|retinoic acid induced 14##AK308306|RAI14|26064|retinoic acid induced 14##NM_001145521|RAI14|26064|retinoic acid induced 14##NM_001145525|RAI14|26064|retinoic acid induced 14##BC028681|RAI14|26064|retinoic acid induced 14##AY317139|RAI14|26064|retinoic acid induced 14##AB037755|RAI14|26064|retinoic acid induced 14##NM_001145520|RAI14|26064|retinoic acid induced 14##AK058168|TTC23L|153657|tetratricopeptide repeat domain 23-like##NM_144725|TTC23L|153657|tetratricopeptide repeat domain 23-like##AK293829|TTC23L|153657|tetratricopeptide repeat domain 23-like##BC032871|TTC23L|153657|tetratricopeptide repeat domain 23-like##BC057775|TTC23L|153657|tetratricopeptide repeat domain 23-like##AK097766|TTC23L|153657|tetratricopeptide repeat domain 23-like##AF074717|RAD1|5810|RAD1 homolog (S. pombe)##BC009804|RAD1|5810|RAD1 homolog (S. pombe)##AJ004974|RAD1|5810|RAD1 homolog (S. pombe)##AJ004975|RAD1|5810|RAD1 homolog (S. pombe)##BC006837|RAD1|5810|RAD1 homolog (S. pombe)##AF073524|RAD1|5810|RAD1 homolog (S. pombe)##AF076841|RAD1|5810|RAD1 homolog (S. pombe)##AF090170|RAD1|5810|RAD1 homolog (S. pombe)##AF084512|RAD1|5810|RAD1 homolog (S. pombe)##AF084513|RAD1|5810|RAD1 homolog (S. pombe)##AF011905|RAD1|5810|RAD1 homolog (S. pombe)##AK002112|RAD1|5810|RAD1 homolog (S. pombe)##NM_002853|RAD1|5810|RAD1 homolog (S. pombe)	0.0	
chr6_ssto_hap7	1897514	1897635	reg1030553.p1	5.125	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.147186	
chrX	114975612	114975793	reg1006652.p2	5.125	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-147834	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-178660	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-180096	+	BC003645 TSC_hg19_v1_chrX_-_115085443	109737	-	AK313927 NM_000686 X87723 U16957	326293	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	592065	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr10	71168406	71168501	reg1018862.p3	5.124	+	TSC_hg19_v1_chr10_+_71078629 BC008730 DQ893281 DQ896762 CU679065 AB384968	-89788	+	AK309904 TSC_hg19_v1_chr10_+_71078627	-89826	+	TSC_hg19_v1_chr10_+_71078602 AK292012 NM_000188 AK294428 AB209526 M75126	-89854	+	AK300649 BC033742 AK291996 NM_001057	8167	-	TSC_hg19_v1_chr10_+_71211220 NM_012339 BC003157 BC004161 AF120266	42808	+	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	42880	+	BC008730|HK1|3098|hexokinase 1##DQ893281|HK1|3098|hexokinase 1##DQ896762|HK1|3098|hexokinase 1##AK309904|HK1|3098|hexokinase 1##AK292012|HK1|3098|hexokinase 1##NM_000188|HK1|3098|hexokinase 1##AK294428|HK1|3098|hexokinase 1##AB209526|HK1|3098|hexokinase 1##M75126|HK1|3098|hexokinase 1##AK300649|TACR2|6865|tachykinin receptor 2##BC033742|TACR2|6865|tachykinin receptor 2##AK291996|TACR2|6865|tachykinin receptor 2##NM_001057|TACR2|6865|tachykinin receptor 2##NM_012339|TSPAN15|23555|tetraspanin 15##BC003157|TSPAN15|23555|tetraspanin 15##BC004161|TSPAN15|23555|tetraspanin 15##AF120266|TSPAN15|23555|tetraspanin 15	0.896791	CTCF.p2:36:0.897
chr1	249152847	249152997	reg1028010.p2	5.124	+	TSC_hg19_v1_chr1_+_249132593 BC068506 BC008872	-20276	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	-20377	+	TSC_hg19_v1_chr1_+_249132449 BC029310	-20465	+	AK309421 AL133100 TSC_hg19_v1_chr1_-_249153150 AK302187 NM_001136036 AK001070 AK298899 BC002948 AK000538 AK225535	166	-	TSC_hg19_v1_chr1_-_249153285 NM_001193328 NM_017865	380	-	TSC_hg19_v1_chr1_+_249200433 AK123219 BC063785 NM_001017434 NM_170725 BX647065 AK298248	47501	+	BC068506|ZNF672|79894|zinc finger protein 672##BC008872|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672##BC029310|ZNF672|79894|zinc finger protein 672##AK309421|ZNF692|55657|zinc finger protein 692##AL133100|ZNF692|55657|zinc finger protein 692##AK302187|ZNF692|55657|zinc finger protein 692##NM_001136036|ZNF692|55657|zinc finger protein 692##AK001070|ZNF692|55657|zinc finger protein 692##AK298899|ZNF692|55657|zinc finger protein 692##BC002948|ZNF692|55657|zinc finger protein 692##AK000538|ZNF692|55657|zinc finger protein 692##AK225535|ZNF692|55657|zinc finger protein 692##NM_001193328|ZNF692|55657|zinc finger protein 692##NM_017865|ZNF692|55657|zinc finger protein 692##AK123219|PGBD2|267002|piggyBac transposable element derived 2##BC063785|PGBD2|267002|piggyBac transposable element derived 2##NM_001017434|PGBD2|267002|piggyBac transposable element derived 2##NM_170725|PGBD2|267002|piggyBac transposable element derived 2##BX647065|PGBD2|267002|piggyBac transposable element derived 2##AK298248|PGBD2|267002|piggyBac transposable element derived 2	0.094146	
chr14	106027608	106027734	reg1007485.p6	5.124	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-34730	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-70035	+	BX248038 NM_001134877	-71152	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	64665	-	BC040042 TSC_hg19_v1_chr14_-_106110945	83252	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	83445	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.249643	CTCF.p2:-10:0.250
chr8	116422205	116422359	reg1028949.p1	5.124	+	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	-1973153	-	AB114605 NM_198124	-2032901	-	BC028739 AK313469 AF167082 NM_014379 AK297393	-5435316	-	TSC_hg19_v1_chr8_-_116680208 AK304046	257938	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	258883	-	TSC_hg19_v1_chr8_-_116681365 AF183810	259053	-	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I	0.2683	CTCF.p2:0:0.268
chr9	2241954	2242062	reg1024602.p1	5.124	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-226712	+	AF130729 NM_181872	-1191399	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-1191638	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	379799	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	380066	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	380104	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.0	
chr9	3475889	3476036	reg1027125.p2	5.124	+	AK127804 TSC_hg19_v1_chr9_-_3223066	-252926	-	TSC_hg19_v1_chr9_-_2844102 AK315531 NM_014878	-631849	-	TSC_hg19_v1_chr9_-_2844084 AL832245 AK225953 AL832239	-631873	-	TSC_hg19_v1_chr9_-_3525889 AK310956 AK289540	49877	-	TSC_hg19_v1_chr9_-_3525983 BC022191 NM_002919 NM_134428	50042	-	TSC_hg19_v1_chr9_+_3526079 AK125504	50126	+	AK315531|KIAA0020|9933|KIAA0020##NM_014878|KIAA0020|9933|KIAA0020##AL832245|KIAA0020|9933|KIAA0020##AK225953|KIAA0020|9933|KIAA0020##AL832239|KIAA0020|9933|KIAA0020##AK310956|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK289540|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##BC022191|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_002919|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_134428|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)	0.0	
chr1	235017938	235018119	reg1026925.p1	5.123	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-122254	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-272782	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-274170	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	274061	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	274203	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	306535	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr15	66377638	66377739	reg1025200.p1	5.123	+	TSC_hg19_v1_chr15_-_66321664 AK054827	-55995	-	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	-215841	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-293095	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	168389	-	NM_133375 AK295392 BC022089	207957	+	TSC_hg19_v1_chr15_+_66585931 NM_001143688 AK095407	208211	+	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	0.921108	CTCF.p2:0:0.921
chr17	72489396	72489528	reg1000689.p1	5.123	+	TSC_hg19_v1_chr17_+_72462821 AF161346 AJ010101 AJ010102 AJ010103 AJ238323 AK309636 BC020681 AB590938 CU689350	-26652	+	AF020314 TSC_hg19_v1_chr17_+_72462772	-26692	+	NM_007261 AJ224864 BC032352	-26924	+	AF427618 AY359025 TSC_hg19_v1_chr17_-_72527570 AY646929	38081	-	TSC_hg19_v1_chr17_-_72527597 DQ893585 DQ896833 BC028091 AK290925 AK298665 NM_174892	38140	-	X66171 TSC_hg19_v1_chr17_-_72542230	52727	-	AF161346|CD300A|11314|CD300a molecule##AJ010101|CD300A|11314|CD300a molecule##AJ010102|CD300A|11314|CD300a molecule##AJ010103|CD300A|11314|CD300a molecule##AJ238323|CD300A|11314|CD300a molecule##AK309636|CD300A|11314|CD300a molecule##BC020681|CD300A|11314|CD300a molecule##AF020314|CD300A|11314|CD300a molecule##NM_007261|CD300A|11314|CD300a molecule##AJ224864|CD300A|11314|CD300a molecule##BC032352|CD300A|11314|CD300a molecule##AF427618|CD300LB|124599|CD300 molecule-like family member b##AY359025|CD300LB|124599|CD300 molecule-like family member b##AY646929|CD300LB|124599|CD300 molecule-like family member b##DQ893585|CD300LB|124599|CD300 molecule-like family member b##DQ896833|CD300LB|124599|CD300 molecule-like family member b##BC028091|CD300LB|124599|CD300 molecule-like family member b##AK290925|CD300LB|124599|CD300 molecule-like family member b##AK298665|CD300LB|124599|CD300 molecule-like family member b##NM_174892|CD300LB|124599|CD300 molecule-like family member b##X66171|CD300C|10871|CD300c molecule	0.0	
chr2	114681283	114681425	reg1024568.p1	5.123	+	AB209353 TSC_hg19_v1_chr2_+_114674521	-6841	+	TSC_hg19_v1_chr2_+_114647862 AB527566 CU692216	-33504	+	TSC_hg19_v1_chr2_+_114647707 AK312659	-33646	+	BC030832 NM_020868	518544	+	AK055256 BC038514 NM_001178036	537812	+	NM_001178037 DQ857321	1140936	+	AB209353|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AK312659|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##BC030832|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_020868|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178037|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857321|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	0.0	
chr4	106418214	106418333	reg1029110.p1	5.123	+	AM393754 AM393796 TSC_hg19_v1_chr4_-_106395220 AK294097 AL136655 AF161473 BC039462 BC008246 BC035569 BC012903 BC022803 AK289607 CU691190 AM393483 EU831414 EU831507 BC001065 BC021071 AB528841 AK297096 AK299125 AK299501 BC057219 AK000466 AB026722 AF217187 NM_006903 NM_176866 NM_176867 NM_176869	-23083	-	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	-350229	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	-350462	+	AK000191 NM_001242729 NM_017700 BC105695	55509	+	TSC_hg19_v1_chr4_-_106629819 BC014442 AK314939 NM_001142471 NM_020395	211568	-	TSC_hg19_v1_chr4_+_106629965 AK303547 BX648355 NM_024751 AK023335 AK225563	211700	+	AM393754|PPA2|27068|pyrophosphatase (inorganic) 2##AM393796|PPA2|27068|pyrophosphatase (inorganic) 2##AK294097|PPA2|27068|pyrophosphatase (inorganic) 2##AL136655|PPA2|27068|pyrophosphatase (inorganic) 2##AF161473|PPA2|27068|pyrophosphatase (inorganic) 2##BC039462|PPA2|27068|pyrophosphatase (inorganic) 2##BC008246|PPA2|27068|pyrophosphatase (inorganic) 2##BC035569|PPA2|27068|pyrophosphatase (inorganic) 2##BC012903|PPA2|27068|pyrophosphatase (inorganic) 2##BC022803|PPA2|27068|pyrophosphatase (inorganic) 2##AK289607|PPA2|27068|pyrophosphatase (inorganic) 2##AM393483|PPA2|27068|pyrophosphatase (inorganic) 2##EU831414|PPA2|27068|pyrophosphatase (inorganic) 2##EU831507|PPA2|27068|pyrophosphatase (inorganic) 2##AK299125|PPA2|27068|pyrophosphatase (inorganic) 2##BC057219|PPA2|27068|pyrophosphatase (inorganic) 2##AK000466|PPA2|27068|pyrophosphatase (inorganic) 2##AB026722|PPA2|27068|pyrophosphatase (inorganic) 2##AF217187|PPA2|27068|pyrophosphatase (inorganic) 2##NM_006903|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176866|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176867|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176869|PPA2|27068|pyrophosphatase (inorganic) 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_001242729|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC014442|INTS12|57117|integrator complex subunit 12##AK314939|INTS12|57117|integrator complex subunit 12##NM_001142471|INTS12|57117|integrator complex subunit 12##NM_020395|INTS12|57117|integrator complex subunit 12##AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	0.908169	CTCF.p2:-16:0.908
chr6	6391566	6391724	reg1028253.p2	5.123	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-70735	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-70760	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-383948	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	197305	+	BC039678 TSC_hg19_v1_chr6_+_6725205	333516	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	716181	+	NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1	0.017409	
chr10	71168690	71168829	reg1018862.p4	5.122	+	TSC_hg19_v1_chr10_+_71078629 BC008730 DQ893281 DQ896762 CU679065 AB384968	-90094	+	AK309904 TSC_hg19_v1_chr10_+_71078627	-90132	+	TSC_hg19_v1_chr10_+_71078602 AK292012 NM_000188 AK294428 AB209526 M75126	-90160	+	AK300649 BC033742 AK291996 NM_001057	7861	-	TSC_hg19_v1_chr10_+_71211220 NM_012339 BC003157 BC004161 AF120266	42502	+	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	42574	+	BC008730|HK1|3098|hexokinase 1##DQ893281|HK1|3098|hexokinase 1##DQ896762|HK1|3098|hexokinase 1##AK309904|HK1|3098|hexokinase 1##AK292012|HK1|3098|hexokinase 1##NM_000188|HK1|3098|hexokinase 1##AK294428|HK1|3098|hexokinase 1##AB209526|HK1|3098|hexokinase 1##M75126|HK1|3098|hexokinase 1##AK300649|TACR2|6865|tachykinin receptor 2##BC033742|TACR2|6865|tachykinin receptor 2##AK291996|TACR2|6865|tachykinin receptor 2##NM_001057|TACR2|6865|tachykinin receptor 2##NM_012339|TSPAN15|23555|tetraspanin 15##BC003157|TSPAN15|23555|tetraspanin 15##BC004161|TSPAN15|23555|tetraspanin 15##AF120266|TSPAN15|23555|tetraspanin 15	1.800123	CTCF.p2:-64:0.995	CTCF.p2:64:0.464	CTCF.p2:-106:0.342
chr13	32399424	32399521	reg1024458.p1	5.122	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-85759	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-625262	+	TSC_hg19_v1_chr13_+_31774111 NM_194318	-625369	+	TSC_hg19_v1_chr13_+_32420857 BC021729	21430	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	205969	+	BC146956 BC146965 NM_001136571	486617	-	NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like	0.0	
chr17	57078858	57079038	reg1028225.p2	5.122	+	AB028995 AF260269 BC151228 NM_014906 TSC_hg19_v1_chr17_+_56833235 BC136290 BC143845 AF520614	-245654	+	TSC_hg19_v1_chr17_+_56833220 AK289966	-245731	+	TSC_hg19_v1_chr17_+_56769962 AF029669 AK290487 BC073161 NM_002876 NM_058216 BC064578 BC093930 BC101485 BC143259 BC000667 AF029670 AB528656 BT007339 AK129738 AK303363	-308947	+	TSC_hg19_v1_chr17_-_57184098 AF213365 AK289674 BX537955	105125	-	BC036012 TSC_hg19_v1_chr17_-_57184114	105166	-	TSC_hg19_v1_chr17_-_57184116 AK292459	105191	-	AB028995|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AF260269|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##BC151228|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##NM_014906|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##BC136290|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##BC143845|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AF520614|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AK289966|PPM1E|22843|protein phosphatase, Mg2+/Mn2+ dependent, 1E##AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF213365|TRIM37|4591|tripartite motif containing 37##AK289674|TRIM37|4591|tripartite motif containing 37##BX537955|TRIM37|4591|tripartite motif containing 37##BC036012|TRIM37|4591|tripartite motif containing 37##AK292459|TRIM37|4591|tripartite motif containing 37	0.0	
chr3	185973536	185973678	reg1023527.p1	5.122	+	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	-146751	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	-147261	-	TSC_hg19_v1_chr3_-_185655843 AK315632 NM_001243879 NM_004593	-317729	-	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	106327	-	CU686840 AF161703 BC069478 AK314172 NM_017541	288533	-	TSC_hg19_v1_chr3_-_186285118 AK001422 BC025748	311501	-	BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AF161703|CRYGS|1427|crystallin, gamma S##BC069478|CRYGS|1427|crystallin, gamma S##AK314172|CRYGS|1427|crystallin, gamma S##NM_017541|CRYGS|1427|crystallin, gamma S##AK001422|TBCCD1|55171|TBCC domain containing 1##BC025748|TBCCD1|55171|TBCC domain containing 1	0.0	
chr8	21826656	21826765	reg1026696.p1	5.122	+	TSC_hg19_v1_chr8_+_21777257 AK291472 AB018288 AF064729 CU689010	-49462	+	TSC_hg19_v1_chr8_+_21777194 NM_015024 BC030785	-49521	+	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	-55545	-	TSC_hg19_v1_chr8_+_21881644 AK094267	54925	+	AY262114 NM_182795 BC068078	55647	+	BC105131 BC113489 BC143789 AY358869 AB009249 BC069475 NM_003867 HQ258756	73704	+	AK291472|XPO7|23039|exportin 7##AB018288|XPO7|23039|exportin 7##AF064729|XPO7|23039|exportin 7##NM_015024|XPO7|23039|exportin 7##BC030785|XPO7|23039|exportin 7##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa##AK094267|NPM2|10361|nucleophosmin/nucleoplasmin 2##AY262114|NPM2|10361|nucleophosmin/nucleoplasmin 2##NM_182795|NPM2|10361|nucleophosmin/nucleoplasmin 2##BC068078|NPM2|10361|nucleophosmin/nucleoplasmin 2##BC105131|FGF17|8822|fibroblast growth factor 17##BC113489|FGF17|8822|fibroblast growth factor 17##BC143789|FGF17|8822|fibroblast growth factor 17##AY358869|FGF17|8822|fibroblast growth factor 17##AB009249|FGF17|8822|fibroblast growth factor 17##BC069475|FGF17|8822|fibroblast growth factor 17##NM_003867|FGF17|8822|fibroblast growth factor 17##HQ258756|FGF17|8822|fibroblast growth factor 17	0.279857	CTCF.p2:3:0.280
chr19	30158895	30159029	reg1028021.p1	5.121	+	TSC_hg19_v1_chr19_+_30156375 AK225814	-2541	+	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	-2613	+	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	-61773	+	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	47130	-	TSC_hg19_v1_chr19_-_30206402 NM_031448	47460	-	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	143939	+	NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1	0.023992	
chr6	2695818	2695908	reg1025706.p1	5.121	+	NM_152554	-60566	-	TSC_hg19_v1_chr6_+_2245995 AK023629	-449850	+	CR541929 CR541947 DQ892789 DQ896036 AF042377 TSC_hg19_v1_chr6_-_2245809 AK130651 AK313953 BC000117 NM_001500	-450065	-	BX647582 NM_001012418 AK096893	55313	-	TSC_hg19_v1_chr6_+_2765561 AK315047	69717	+	TSC_hg19_v1_chr6_+_2765645 AB056152 NM_020135 NM_130395	69776	+	NM_152554|C6orf195|154386|chromosome 6 open reading frame 195##CR541929|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541947|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ892789|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ896036|GMDS|2762|GDP-mannose 4,6-dehydratase##AF042377|GMDS|2762|GDP-mannose 4,6-dehydratase##AK130651|GMDS|2762|GDP-mannose 4,6-dehydratase##AK313953|GMDS|2762|GDP-mannose 4,6-dehydratase##BC000117|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001500|GMDS|2762|GDP-mannose 4,6-dehydratase##BX647582|MYLK4|340156|myosin light chain kinase family, member 4##NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4##AK096893|MYLK4|340156|myosin light chain kinase family, member 4##AK315047|WRNIP1|56897|Werner helicase interacting protein 1##AB056152|WRNIP1|56897|Werner helicase interacting protein 1##NM_020135|WRNIP1|56897|Werner helicase interacting protein 1##NM_130395|WRNIP1|56897|Werner helicase interacting protein 1	0.45471	CTCF.p2:27:0.455
chr7	129464803	129464891	reg1016889.p1	5.121	+	L22454 NM_001040110	-194930	+	AK293351 TSC_hg19_v1_chr7_+_129251621 BC016925 AK290891	-213235	+	TSC_hg19_v1_chr7_+_129251531 NM_005011	-213306	+	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	127904	-	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	127962	-	TSC_hg19_v1_chr7_-_129691215 BC000190 AB463378 AJ537494 AM393415 CU679956 BC011551 AF151050 AK001317 AK022373 NM_016478	226374	-	L22454|NRF1|4899|nuclear respiratory factor 1##NM_001040110|NRF1|4899|nuclear respiratory factor 1##AK293351|NRF1|4899|nuclear respiratory factor 1##BC016925|NRF1|4899|nuclear respiratory factor 1##AK290891|NRF1|4899|nuclear respiratory factor 1##NM_005011|NRF1|4899|nuclear respiratory factor 1##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC000190|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AJ537494|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AM393415|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC011551|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AF151050|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK001317|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK022373|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_016478|ZC3HC1|51530|zinc finger, C3HC-type containing 1	0.0	
chr9	26614003	26614104	reg1025197.p1	5.121	+	AK131322 NM_001004352	-547381	+	NM_001004125	-935198	-	BC017510 TSC_hg19_v1_chr9_-_25678278 BC046919 AY168647 BC110824	-935720	-	AB590748 CU687198 BC071953 TSC_hg19_v1_chr9_-_26892779 AK023719 BC014658 NM_001167575 NM_024828	278716	-	EU176453 EU176795 AB385043 TSC_hg19_v1_chr9_-_26947158 BC032551 AK022761	333051	-	TSC_hg19_v1_chr9_-_26947165 AK001642	333115	-	AK131322|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004352|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004125|TUSC1|286319|tumor suppressor candidate 1##BC017510|TUSC1|286319|tumor suppressor candidate 1##BC046919|TUSC1|286319|tumor suppressor candidate 1##AY168647|TUSC1|286319|tumor suppressor candidate 1##BC110824|TUSC1|286319|tumor suppressor candidate 1##BC071953|C9orf82|79886|chromosome 9 open reading frame 82##AK023719|C9orf82|79886|chromosome 9 open reading frame 82##BC014658|C9orf82|79886|chromosome 9 open reading frame 82##NM_001167575|C9orf82|79886|chromosome 9 open reading frame 82##NM_024828|C9orf82|79886|chromosome 9 open reading frame 82##EU176453|PLAA|9373|phospholipase A2-activating protein##EU176795|PLAA|9373|phospholipase A2-activating protein##BC032551|PLAA|9373|phospholipase A2-activating protein##AK022761|PLAA|9373|phospholipase A2-activating protein##AK001642|PLAA|9373|phospholipase A2-activating protein	0.830068	CTCF.p2:13:0.830
chr9	43187334	43187450	reg1028090.p1	5.121	+	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-53905	-	NM_001099279 NM_199244	-470159	+	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	-819034	+	NM_001145196	443337	-	TSC_hg19_v1_chr9_+_43684876 NM_001201380	497451	+	TSC_hg19_v1_chr9_+_45441926 BC006438	2254534	+	AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##BC006438|LOC100132167|100132167|uncharacterized LOC100132167	0.991931	CTCF.p2:-3:0.992
chr20	43540180	43540294	reg1027916.p1	5.120	+	TSC_hg19_v1_chr20_+_43538705 NM_001124756 EU190483	-1519	+	TSC_hg19_v1_chr20_+_43514390 AL834170 AB209759	-25867	+	TSC_hg19_v1_chr20_+_43514345 NM_003404 NM_139323 AK292717 BC001359	-25893	+	AB590243 BT020008 BT020009 CR456765 CU677113 DQ891151 EU176561 TSC_hg19_v1_chr20_-_43589038 AK129538 U58970 BC014907 AK222952 BC001763 BC007423 AK000594 BC006573 AB085681 AK302128 AK307655 NM_006809	48817	-	NM_006282 TSC_hg19_v1_chr20_+_43595152 AB209315 BC029511 AK309169 AK225326 BC005231 BC015332 BC038850 CR933633 BC093768	54909	+	AK315238 U60207 TSC_hg19_v1_chr20_+_43595176 BC058916 BC039023 U18297	54954	+	NM_001124756|PABPC1L|80336|poly(A) binding protein, cytoplasmic 1-like##EU190483|PABPC1L|80336|poly(A) binding protein, cytoplasmic 1-like##AL834170|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AB209759|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##NM_003404|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##NM_139323|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AK292717|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##BC001359|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##BT020008|TOMM34|10953|translocase of outer mitochondrial membrane 34##BT020009|TOMM34|10953|translocase of outer mitochondrial membrane 34##CR456765|TOMM34|10953|translocase of outer mitochondrial membrane 34##DQ891151|TOMM34|10953|translocase of outer mitochondrial membrane 34##EU176561|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK129538|TOMM34|10953|translocase of outer mitochondrial membrane 34##U58970|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC014907|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK222952|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC001763|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC007423|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK000594|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC006573|TOMM34|10953|translocase of outer mitochondrial membrane 34##AB085681|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK302128|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK307655|TOMM34|10953|translocase of outer mitochondrial membrane 34##NM_006809|TOMM34|10953|translocase of outer mitochondrial membrane 34##NM_006282|STK4|6789|serine/threonine kinase 4##AB209315|STK4|6789|serine/threonine kinase 4##BC029511|STK4|6789|serine/threonine kinase 4##AK309169|STK4|6789|serine/threonine kinase 4##AK225326|STK4|6789|serine/threonine kinase 4##BC005231|STK4|6789|serine/threonine kinase 4##BC015332|STK4|6789|serine/threonine kinase 4##BC038850|STK4|6789|serine/threonine kinase 4##CR933633|STK4|6789|serine/threonine kinase 4##BC093768|STK4|6789|serine/threonine kinase 4##AK315238|STK4|6789|serine/threonine kinase 4##U60207|STK4|6789|serine/threonine kinase 4##BC058916|STK4|6789|serine/threonine kinase 4##BC039023|STK4|6789|serine/threonine kinase 4##U18297|STK4|6789|serine/threonine kinase 4	0.550434	CTCF.p2:-22:0.535
chrX	140000663	140000797	reg1027140.p1	5.120	+	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	-134078	-	TSC_hg19_v1_chrX_+_139791923 AK054978	-208803	+	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	-413478	-	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	84076	+	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	96081	+	CR457088 EU446786 AB464610 TSC_hg19_v1_chrX_-_140271262	270504	-	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1##CR457088|LDOC1|23641|leucine zipper, down-regulated in cancer 1##EU446786|LDOC1|23641|leucine zipper, down-regulated in cancer 1	1.989862	CTCF.p2:21:0.994	CTCF.p2:-24:0.996
chr11	78143355	78143515	reg1028246.p2	5.119	+	TSC_hg19_v1_chr11_-_78128866 NM_080491	-14559	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	-14629	-	AB011143 BC152459 NM_012296	-90510	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	142357	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	142460	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	1008289	-	NM_080491|GAB2|9846|GRB2-associated binding protein 2##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)	0.878769	CTCF.p2:16:0.879
chr1	180886555	180886677	reg1026011.p1	5.119	+	NM_020950 AB046834	-4298	+	AF099082 TSC_hg19_v1_chr1_+_180601194 AF115389 CU691970	-285339	+	TSC_hg19_v1_chr1_+_180601171 BC041142 AF089744	-285448	+	TSC_hg19_v1_chr1_+_180897572 BC000118	10965	+	BC009944 TSC_hg19_v1_chr1_-_180992009 AK299063 AK312440	105394	-	TSC_hg19_v1_chr1_-_180992052 NM_005819	105433	-	NM_020950|KIAA1614|57710|KIAA1614##AB046834|KIAA1614|57710|KIAA1614##AF099082|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF115389|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##BC041142|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF089744|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##BC009944|STX6|10228|syntaxin 6##AK299063|STX6|10228|syntaxin 6##AK312440|STX6|10228|syntaxin 6##NM_005819|STX6|10228|syntaxin 6	0.51982	CTCF.p2:-18:0.520
chr16	81038395	81038492	reg1024358.p1	5.119	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	-200396	-	AF125108 NM_130897 BC054892 BC035232	-463555	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-1403828	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	1641	+	TSC_hg19_v1_chr16_+_81040132 BC007334	1700	+	TSC_hg19_v1_chr16_-_81040491 AF201935 BC032631 NM_020188	2027	-	AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N##BC007334|CENPN|55839|centromere protein N##AF201935|C16orf61|56942|chromosome 16 open reading frame 61##BC032631|C16orf61|56942|chromosome 16 open reading frame 61##NM_020188|C16orf61|56942|chromosome 16 open reading frame 61	0.998982	CTCF.p2:-17:0.999
chr17	36761113	36761207	reg1023658.p1	5.119	+	BC029278 TSC_hg19_v1_chr17_-_36760969	-222	-	TSC_hg19_v1_chr17_-_36729122 AK295027	-32038	-	TSC_hg19_v1_chr17_+_36584709 NM_001199417	-176455	+	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	1036	-	TSC_hg19_v1_chr17_-_36831211 NM_001130677	70025	-	TSC_hg19_v1_chr17_+_36861421 BC064612	100439	+	BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96##BC064612|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	1.396354	CTCF.p2:-21:0.864	CTCF.p2:57:0.500
chr2	208176308	208176489	reg1020614.p2	5.119	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-144773	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-145742	-	BC112076 BC112078 NM_173077 AJ422118	-372098	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	218245	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	218323	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	218383	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.0	
chr5	82089728	82089877	reg1023534.p1	5.119	+	BC093982 BC112191 NM_001017971	-488637	+	TSC_hg19_v1_chr5_-_81574219 NM_001025	-515583	-	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	-515631	-	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	283395	-	TSC_hg19_v1_chr5_-_82373255 NM_174909	283460	-	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	283581	+	BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001025|RPS23|6228|ribosomal protein S23##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##NM_174909|TMEM167A|153339|transmembrane protein 167A##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4	0.894056	CTCF.p2:29:0.894
chrX	7674224	7674384	reg1029036.p1	5.119	+	NM_000351 M16505 J04964 AK314034	-536803	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	-608112	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	-608353	+	AF167081 NM_013452	135998	+	AK289888 U03886 NM_004650 BC020746	221146	-	AK304586 TSC_hg19_v1_chrX_-_7895766 NM_001142389 NM_001172672	221467	-	NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##AF167081|VCX|26609|variable charge, X-linked##NM_013452|VCX|26609|variable charge, X-linked##AK289888|PNPLA4|8228|patatin-like phospholipase domain containing 4##U03886|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_004650|PNPLA4|8228|patatin-like phospholipase domain containing 4##BC020746|PNPLA4|8228|patatin-like phospholipase domain containing 4##AK304586|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001142389|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001172672|PNPLA4|8228|patatin-like phospholipase domain containing 4	0.967971	CTCF.p2:-36:0.968
chr1	101871960	101872048	reg1028130.p2	5.118	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-169434	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-169623	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-380571	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	590483	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	590786	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1624779	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.211339	CTCF.p2:4:0.211
chr11	68065509	68065624	reg1000324.p2	5.118	+	TSC_hg19_v1_chr11_-_68039453 NM_022338	-26108	-	TSC_hg19_v1_chr11_-_68039418 AF264781	-26180	-	TSC_hg19_v1_chr11_-_67981112 AF264782 BC002522 BC065287 BC087834 NM_016028 NM_017635 BC108304 AK314336 AK299201	-84587	-	TSC_hg19_v1_chr11_+_68080058 AB017498 NM_002335 AF077820 AF064548 BC150595 BC098397	14523	+	AF088027 TSC_hg19_v1_chr11_+_68115450	49870	+	TSC_hg19_v1_chr11_+_68228219 NM_001164160 NM_001164161 NM_001164162 NM_001164163 NM_001164164 NM_018312 BC070121 AK298180 AK303315 AK315136 CR936718 CR749815 CR933658 AB046778	162643	+	NM_022338|C11orf24|53838|chromosome 11 open reading frame 24##AF264781|C11orf24|53838|chromosome 11 open reading frame 24##AF264782|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC002522|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC065287|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC087834|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_016028|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_017635|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC108304|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK314336|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK299201|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AB017498|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_002335|LRP5|4041|low density lipoprotein receptor-related protein 5##AF077820|LRP5|4041|low density lipoprotein receptor-related protein 5##AF064548|LRP5|4041|low density lipoprotein receptor-related protein 5##BC150595|LRP5|4041|low density lipoprotein receptor-related protein 5##BC098397|LRP5|4041|low density lipoprotein receptor-related protein 5##AF088027|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_001164160|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164161|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164162|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164163|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164164|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_018312|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##BC070121|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK298180|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK303315|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK315136|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR936718|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR749815|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR933658|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AB046778|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	0.0	
chr18	77156530	77156635	reg1025882.p1	5.118	+	TSC_hg19_v1_chr18_+_77155967 U08015 BC104753 BC112243 BC143457 EU887559 EU887561 EU887563 EU887565	-487	+	U80919 TSC_hg19_v1_chr18_+_77155946	-636	+	TSC_hg19_v1_chr18_+_77155929 AK292641	-649	+	TSC_hg19_v1_chr18_+_77160328 NM_172387 NM_172389 U59736 AK293760 U80918 X99829 EU887560 EU887562 EU887564 EU887566	3735	+	BC045628 TSC_hg19_v1_chr18_+_77253425	96798	+	TSC_hg19_v1_chr18_-_77439359 AK002023	282731	-	U08015|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC104753|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC112243|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC143457|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887559|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887561|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887563|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887565|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80919|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK292641|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172387|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172389|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U59736|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK293760|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80918|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887560|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887562|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887564|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887566|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	0.0	
chr6_cox_hap2	4573188	4573298	reg1028112.p2	5.118	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.964158	CTCF.p2:-6:0.964
chr21	14713120	14713248	reg1027331.p2	5.117	+	BC101132 BC101133 BC101134 BC107038 BC107039 BC113810 AF218570 AF339514 AF339515 AF339516 NM_181704 NM_182481 NM_182482 NM_182484 AF527550 AF527551 AF527553 NM_001187 U19180 BC017024 TSC_hg19_v1_chr21_-_11098961 AK292540 BC064647	-3614285	-	AK308254 AK314285 TSC_hg19_v1_chr21_-_10990898 AF007118 AF495908 AY219886 AY219887 AY219888 AL833345 BC028719 NM_199259 NM_199260 NM_199261	-3722286	-	None	None	None	AY172978 NM_174981 AY465173	269315	+	TSC_hg19_v1_chr21_+_15399763 BC070147 BC024173 BC048201	686580	+	AB463838 AY197607 NM_198996	866064	-	BC101132|BAGE2|85319|B melanoma antigen family, member 2##BC101133|BAGE2|85319|B melanoma antigen family, member 2##BC101134|BAGE3|85318|B melanoma antigen family, member 3##BC107038|BAGE|574|B melanoma antigen##BC107039|BAGE|574|B melanoma antigen##BC113810|BAGE|574|B melanoma antigen##AF218570|BAGE2|85319|B melanoma antigen family, member 2##AF339514|BAGE3|85318|B melanoma antigen family, member 3##AF339515|BAGE4|85317|B melanoma antigen family, member 4##AF339516|BAGE5|85316|B melanoma antigen family, member 5##NM_181704|BAGE4|85317|B melanoma antigen family, member 4##NM_182481|BAGE3|85318|B melanoma antigen family, member 3##NM_182482|BAGE2|85319|B melanoma antigen family, member 2##NM_182484|BAGE5|85316|B melanoma antigen family, member 5##AF527550|BAGE|574|B melanoma antigen##AF527551|BAGE|574|B melanoma antigen##AF527553|BAGE|574|B melanoma antigen##NM_001187|BAGE|574|B melanoma antigen##U19180|BAGE|574|B melanoma antigen##AK292540|BAGE2|85319|B melanoma antigen family, member 2##AK308254|TPTE|7179|transmembrane phosphatase with tensin homology##AK314285|TPTE|7179|transmembrane phosphatase with tensin homology##AF007118|TPTE|7179|transmembrane phosphatase with tensin homology##AF495908|TPTE|7179|transmembrane phosphatase with tensin homology##AY219886|TPTE|7179|transmembrane phosphatase with tensin homology##AY219887|TPTE|7179|transmembrane phosphatase with tensin homology##AY219888|TPTE|7179|transmembrane phosphatase with tensin homology##AL833345|TPTE|7179|transmembrane phosphatase with tensin homology##BC028719|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199259|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199260|TPTE|7179|transmembrane phosphatase with tensin homology##NM_199261|TPTE|7179|transmembrane phosphatase with tensin homology##AY172978|POTED|317754|POTE ankyrin domain family, member D##NM_174981|POTED|317754|POTE ankyrin domain family, member D##AY465173|POTEB|339010|POTE ankyrin domain family, member B##AY197607|LIPI|149998|lipase, member I##NM_198996|LIPI|149998|lipase, member I	0.071266	
chr15	35261978	35262128	reg1023084.p1	5.116	+	AB384497 AK291615 BC127111 BC127112 TSC_hg19_v1_chr15_-_35261899 AB011132 AK315815 BX647820 EF553519 NM_014691	-126	-	AK129892 AK056592 AK129902 AK290616 TSC_hg19_v1_chr15_-_35087751 BC009978 NM_005159	-174216	-	BC069131 BC069339 NM_020660 BC112110 BC112114 BC143788	-215319	-	TSC_hg19_v1_chr15_-_35280489 BC071603 AK291438	18401	-	NM_014106 TSC_hg19_v1_chr15_-_35280498	18459	-	CU688170 TSC_hg19_v1_chr15_-_35838365 BC066652 AK094007 AL833427 AX748407 AK125017 NM_001141972 NM_080650	576333	-	AK291615|AQR|9716|aquarius homolog (mouse)##BC127111|AQR|9716|aquarius homolog (mouse)##BC127112|AQR|9716|aquarius homolog (mouse)##AB011132|AQR|9716|aquarius homolog (mouse)##AK315815|AQR|9716|aquarius homolog (mouse)##BX647820|AQR|9716|aquarius homolog (mouse)##EF553519|AQR|9716|aquarius homolog (mouse)##NM_014691|AQR|9716|aquarius homolog (mouse)##AK129892|ACTC1|70|actin, alpha, cardiac muscle 1##AK056592|ACTC1|70|actin, alpha, cardiac muscle 1##AK129902|ACTC1|70|actin, alpha, cardiac muscle 1##AK290616|ACTC1|70|actin, alpha, cardiac muscle 1##BC009978|ACTC1|70|actin, alpha, cardiac muscle 1##NM_005159|ACTC1|70|actin, alpha, cardiac muscle 1##BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa##BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa##NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa##BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa##BC071603|ZNF770|54989|zinc finger protein 770##AK291438|ZNF770|54989|zinc finger protein 770##NM_014106|ZNF770|54989|zinc finger protein 770##BC066652|ATPBD4|89978|ATP binding domain 4##AK094007|ATPBD4|89978|ATP binding domain 4##AL833427|ATPBD4|89978|ATP binding domain 4##AK125017|ATPBD4|89978|ATP binding domain 4##NM_001141972|ATPBD4|89978|ATP binding domain 4##NM_080650|ATPBD4|89978|ATP binding domain 4	0.174985	
chr17	55970108	55970283	reg1001494.p2	5.116	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	-42791	-	AK093888 AX748353 NM_170721	-635822	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-636222	+	AK000746 NM_017949	10554	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	62481	-	TSC_hg19_v1_chr17_+_56065413 AB593183	95279	+	AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.098321	
chr19	14014036	14014189	reg1029742.p1	5.116	+	BC101209 BC101210 NM_001098622	-26050	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	-67010	-	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-107867	+	AK097431 NM_024323	2796	-	NM_017721 TSC_hg19_v1_chr19_+_14017006	2868	+	TSC_hg19_v1_chr19_+_14017013 AB097002	2898	+	BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57##NM_017721|CC2D1A|54862|coiled-coil and C2 domain containing 1A##AB097002|CC2D1A|54862|coiled-coil and C2 domain containing 1A	0.849232	CTCF.p2:44:0.849
chr20	44715952	44716057	reg1026382.p2	5.116	+	TSC_hg19_v1_chr20_+_44657861 AK289758 AK296331 AK294059 BC132668 BC132670 AK295096 AF208159 AB033002	-58073	+	TSC_hg19_v1_chr20_+_44657824 NM_020708 AK098371	-58181	+	TSC_hg19_v1_chr20_+_44650321 NM_001134771	-65684	+	TSC_hg19_v1_chr20_-_44718529 BC056872	2520	-	TSC_hg19_v1_chr20_-_44718561 AF230533	2549	-	TSC_hg19_v1_chr20_-_44718581 NM_020967	2607	-	AK289758|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK296331|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK294059|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC132668|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC132670|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK295096|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AF208159|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AB033002|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##NM_020708|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK098371|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##NM_001134771|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC056872|NCOA5|57727|nuclear receptor coactivator 5##AF230533|NCOA5|57727|nuclear receptor coactivator 5##NM_020967|NCOA5|57727|nuclear receptor coactivator 5	0.997785	CTCF.p2:1:0.998
chr4	139476894	139477029	reg1026946.p2	5.116	+	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	-313597	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-1023319	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-1023369	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	460032	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	528442	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	528650	-	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.842001	CTCF.p2:0:0.842
chr8	143705435	143705534	reg1006983.p1	5.116	+	AF193421 D87468 BC075802 BC012321 NM_015193 TSC_hg19_v1_chr8_-_143695839	-9658	-	AB005297 NM_001702	-160108	+	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	-220947	-	TSC_hg19_v1_chr8_-_143751386 BC071862	45870	-	TSC_hg19_v1_chr8_-_143751397 AK127631 NM_001077527 NM_003724 BX640755	45917	-	NM_005672 AJ297436 AF043498 BC023582 BC048808 BC065183 CU692804 AY358912	56422	+	AF193421|ARC|23237|activity-regulated cytoskeleton-associated protein##D87468|ARC|23237|activity-regulated cytoskeleton-associated protein##BC075802|ARC|23237|activity-regulated cytoskeleton-associated protein##BC012321|ARC|23237|activity-regulated cytoskeleton-associated protein##NM_015193|ARC|23237|activity-regulated cytoskeleton-associated protein##AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##BC071862|JRK|8629|jerky homolog (mouse)##AK127631|JRK|8629|jerky homolog (mouse)##NM_001077527|JRK|8629|jerky homolog (mouse)##NM_003724|JRK|8629|jerky homolog (mouse)##BX640755|JRK|8629|jerky homolog (mouse)##NM_005672|PSCA|8000|prostate stem cell antigen##AJ297436|PSCA|8000|prostate stem cell antigen##AF043498|PSCA|8000|prostate stem cell antigen##BC023582|PSCA|8000|prostate stem cell antigen##BC048808|PSCA|8000|prostate stem cell antigen##BC065183|PSCA|8000|prostate stem cell antigen##AY358912|PSCA|8000|prostate stem cell antigen	0.966722	
chr16	19178069	19178161	reg1027092.p1	5.115	+	TSC_hg19_v1_chr16_+_19125253 AK096327 NM_001034841	-52867	+	TSC_hg19_v1_chr16_+_19079232 AL136647 NM_001190983 BC043272	-98850	+	AF098948 TSC_hg19_v1_chr16_+_19078967 AK225115 AB528110 AM393051 AM393521	-99143	+	TSC_hg19_v1_chr16_+_19179561 NM_016524 BC004518 AF220560 AB527504 CU678742	1636	+	BC070101 NM_001105248 NM_001105249	243941	+	AY236494 NM_024780 BC038118 AK097718 BC027602 AK131202	289689	+	AK096327|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##NM_001034841|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##AL136647|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_001190983|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC043272|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AF098948|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK225115|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AM393051|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AM393521|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_016524|SYT17|51760|synaptotagmin XVII##BC004518|SYT17|51760|synaptotagmin XVII##AF220560|SYT17|51760|synaptotagmin XVII##BC070101|TMC5|79838|transmembrane channel-like 5##NM_001105248|TMC5|79838|transmembrane channel-like 5##NM_001105249|TMC5|79838|transmembrane channel-like 5##AY236494|TMC5|79838|transmembrane channel-like 5##NM_024780|TMC5|79838|transmembrane channel-like 5##BC038118|TMC5|79838|transmembrane channel-like 5##AK097718|TMC5|79838|transmembrane channel-like 5##BC027602|TMC5|79838|transmembrane channel-like 5##AK131202|TMC5|79838|transmembrane channel-like 5	0.0	
chr22	19462138	19462251	reg1029124.p1	5.115	+	AK290073 NM_001166242 NM_173793	-26454	-	BC030758 CU013050 CU013338 TSC_hg19_v1_chr22_-_19435224 AK299950 AK095271 AK308642 CR456339 BC046204 BC062599 AK289809	-26966	-	TSC_hg19_v1_chr22_+_19420067 BC009707 NM_003776 AF034091 AJ295637 CR456532 AB528186 CU013132 CU013420 AK057708	-42147	+	CR456607 TSC_hg19_v1_chr22_-_19466707 AY101594 U64444 BC001049 BC005087 AK315998 AK225877 BX648483 AK304734 AK308786	4471	-	TSC_hg19_v1_chr22_-_19466712 AK310950	4519	-	TSC_hg19_v1_chr22_-_19466726 NM_001035247 NM_005659	4542	-	AK290073|C22orf39|128977|chromosome 22 open reading frame 39##NM_001166242|C22orf39|128977|chromosome 22 open reading frame 39##NM_173793|C22orf39|128977|chromosome 22 open reading frame 39##BC030758|C22orf39|128977|chromosome 22 open reading frame 39##AK299950|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##AK095271|C22orf39|128977|chromosome 22 open reading frame 39##AK308642|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##CR456339|C22orf39|128977|chromosome 22 open reading frame 39##BC046204|C22orf39|128977|chromosome 22 open reading frame 39##BC062599|C22orf39|128977|chromosome 22 open reading frame 39##AK289809|HIRA|7290|HIR histone cell cycle regulation defective homolog A (S. cerevisiae)##BC009707|MRPL40|64976|mitochondrial ribosomal protein L40##NM_003776|MRPL40|64976|mitochondrial ribosomal protein L40##AF034091|MRPL40|64976|mitochondrial ribosomal protein L40##AJ295637|MRPL40|64976|mitochondrial ribosomal protein L40##CR456532|MRPL40|64976|mitochondrial ribosomal protein L40##CU013132|MRPL40|64976|mitochondrial ribosomal protein L40##CU013420|MRPL40|64976|mitochondrial ribosomal protein L40##AK057708|MRPL40|64976|mitochondrial ribosomal protein L40##CR456607|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##AY101594|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##U64444|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##BC001049|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##BC005087|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##AK315998|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##AK225877|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##BX648483|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##AK304734|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##AK308786|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##AK310950|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##NM_001035247|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)##NM_005659|UFD1L|7353|ubiquitin fusion degradation 1 like (yeast)	0.685911	CTCF.p2:-24:0.686
chr22	31688457	31688602	reg1030230.p1	5.115	+	AB489144 CU013051 CU013339 CR456340 GU135609 AK226089 TSC_hg19_v1_chr22_-_31688475 AK300990 AF528079 AF528080 BC011049 AK074688 AK299397 NM_001135911 NM_052880	-105	-	TSC_hg19_v1_chr22_-_31686709 BC041903 AK093768	-1806	-	TSC_hg19_v1_chr22_+_31644372 AK314391 AK293774 AL117466 D85527 BC013051	-44109	+	TSC_hg19_v1_chr22_-_31741603 AL096880 CU013210 CU013498 AB384725 AF242522 CR456613	53096	-	AK291803 TSC_hg19_v1_chr22_-_31741928 BC021091	53336	-	AF254082 AF254083 AF254084 AF254085 AF119256 NM_014323 NM_032050 NM_032051 NM_032052 TSC_hg19_v1_chr22_-_31742310 AB208787	53736	-	CR456340|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##GU135609|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK226089|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK300990|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AF528079|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AF528080|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##BC011049|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK074688|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK299397|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##NM_001135911|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##NM_052880|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##BC041903|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK093768|PIK3IP1|113791|phosphoinositide-3-kinase interacting protein 1##AK314391|LIMK2|3985|LIM domain kinase 2##AK293774|LIMK2|3985|LIM domain kinase 2##AL117466|LIMK2|3985|LIM domain kinase 2##D85527|LIMK2|3985|LIM domain kinase 2##BC013051|LIMK2|3985|LIM domain kinase 2##AL096880|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF242522|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##CR456613|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AK291803|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##BC021091|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF254082|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF254083|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF254084|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF254085|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AF119256|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##NM_014323|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##NM_032050|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##NM_032051|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##NM_032052|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1##AB208787|PATZ1|23598|POZ (BTB) and AT hook containing zinc finger 1	0.0	
chr5	94229597	94229711	reg1027367.p1	5.115	+	AK025997 TSC_hg19_v1_chr5_-_94224607	-5048	-	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	-275281	+	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	-275397	-	AY656716 AK058012 BC030005 AK057694 TSC_hg19_v1_chr5_-_94417350	187614	-	NM_001002796	187890	-	TSC_hg19_v1_chr5_-_94620306 AY656715 NM_024717	390639	-	AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1##BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1##AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1##BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1##AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_001002796|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656715|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_024717|MCTP1|79772|multiple C2 domains, transmembrane 1	0.0	
chr8	146052111	146052226	reg1023107.p1	5.115	+	TSC_hg19_v1_chr8_+_146024301 AK131440 NM_213605 AK096527 AK097278	-27846	+	AK289459 TSC_hg19_v1_chr8_-_146017781 BC093064 NM_000973 AK309619	-34375	-	AK301073 D28421 TSC_hg19_v1_chr8_-_146017776	-34392	-	AK127225 TSC_hg19_v1_chr8_-_146052601	376	-	NM_003416 TSC_hg19_v1_chr8_+_146052963 AK096025 AK301561 AK308002 BX647998 BC058923 AK313745 AK300001 M29580	789	+	TSC_hg19_v1_chr8_-_146078415 BC003055 AK023070 BC065729	26218	-	AK131440|ZNF517|340385|zinc finger protein 517##NM_213605|ZNF517|340385|zinc finger protein 517##AK096527|ZNF517|340385|zinc finger protein 517##AK097278|ZNF517|340385|zinc finger protein 517##AK289459|RPL8|6132|ribosomal protein L8##BC093064|RPL8|6132|ribosomal protein L8##NM_000973|RPL8|6132|ribosomal protein L8##AK309619|RPL8|6132|ribosomal protein L8##AK301073|RPL8|6132|ribosomal protein L8##AK127225|LOC100130027|100130027|uncharacterized LOC100130027##NM_003416|ZNF7|7553|zinc finger protein 7##AK096025|ZNF7|7553|zinc finger protein 7##AK301561|ZNF7|7553|zinc finger protein 7##AK308002|ZNF7|7553|zinc finger protein 7##BX647998|ZNF7|7553|zinc finger protein 7##BC058923|ZNF7|7553|zinc finger protein 7##AK313745|ZNF7|7553|zinc finger protein 7##AK300001|ZNF7|7553|zinc finger protein 7##M29580|ZNF7|7553|zinc finger protein 7##BC003055|COMMD5|28991|COMM domain containing 5##AK023070|COMMD5|28991|COMM domain containing 5##BC065729|COMMD5|28991|COMM domain containing 5	0.0	
chrX	11549490	11549591	reg1026241.p1	5.115	+	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	-237998	+	AF177663 NM_013423 AK297713	-265432	-	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	-420071	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	134280	-	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	226803	+	NM_001193270 AK300814	227177	+	AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase##AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	0.984032	CTCF.p2:9:0.984
chr12	112450817	112450964	reg1026037.p1	5.114	+	NM_003668 NM_139078 BC047284	-170570	+	BC041049 TSC_hg19_v1_chr12_+_112280044	-170817	+	AK122767 TSC_hg19_v1_chr12_+_112280039	-170978	+	BC048796 BC070135 AK074648 TSC_hg19_v1_chr12_-_112450970 AL833501 BC000282 AK092832 AX747754 NM_001193453 NM_001193531 NM_138341	78	-	NM_001034025 NM_006817 TSC_hg19_v1_chr12_+_112451212 BC101493 BC101495	296	+	TSC_hg19_v1_chr12_+_112451229 AK309426	340	+	NM_003668|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##NM_139078|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##BC047284|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##BC041049|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##AK122767|MAPKAPK5|8550|mitogen-activated protein kinase-activated protein kinase 5##BC048796|TMEM116|89894|transmembrane protein 116##BC070135|TMEM116|89894|transmembrane protein 116##AK074648|TMEM116|89894|transmembrane protein 116##AL833501|TMEM116|89894|transmembrane protein 116##BC000282|TMEM116|89894|transmembrane protein 116##AK092832|LOC728543|728543|uncharacterized LOC728543##NM_001193453|TMEM116|89894|transmembrane protein 116##NM_001193531|TMEM116|89894|transmembrane protein 116##NM_138341|TMEM116|89894|transmembrane protein 116##NM_001034025|ERP29|10961|endoplasmic reticulum protein 29##NM_006817|ERP29|10961|endoplasmic reticulum protein 29##BC101493|ERP29|10961|endoplasmic reticulum protein 29##BC101495|ERP29|10961|endoplasmic reticulum protein 29	0.0	
chr12	54754650	54754750	reg1005110.p1	5.114	+	TSC_hg19_v1_chr12_+_54718927 AK223188 BC002849 AB463530 CU678240	-35763	+	TSC_hg19_v1_chr12_+_54718925 AB047848 AF086911	-35775	+	TSC_hg19_v1_chr12_+_54718922 AK293377 AK295325	-35780	+	AF237762 AF282693 TSC_hg19_v1_chr12_-_54758271 BC020614 NM_020370 AK290394	3550	-	AB528580 CR457327 TSC_hg19_v1_chr12_-_54778374	23636	-	AK296564 TSC_hg19_v1_chr12_-_54778485 AF304052 NM_015481	23774	-	AK223188|COPZ1|22818|coatomer protein complex, subunit zeta 1##BC002849|COPZ1|22818|coatomer protein complex, subunit zeta 1##AB047848|COPZ1|22818|coatomer protein complex, subunit zeta 1##AF086911|COPZ1|22818|coatomer protein complex, subunit zeta 1##AK293377|COPZ1|22818|coatomer protein complex, subunit zeta 1##AK295325|COPZ1|22818|coatomer protein complex, subunit zeta 1##AF237762|GPR84|53831|G protein-coupled receptor 84##AF282693|GPR84|53831|G protein-coupled receptor 84##BC020614|GPR84|53831|G protein-coupled receptor 84##NM_020370|GPR84|53831|G protein-coupled receptor 84##AK290394|GPR84|53831|G protein-coupled receptor 84##CR457327|ZNF385A|25946|zinc finger protein 385A##AK296564|ZNF385A|25946|zinc finger protein 385A##AF304052|ZNF385A|25946|zinc finger protein 385A##NM_015481|ZNF385A|25946|zinc finger protein 385A	0.0	
chr14	77495113	77495293	reg1025487.p3	5.114	+	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-143	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	-519	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-202408	+	AK124327 TSC_hg19_v1_chr14_-_77542533	47330	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	69442	+	BC117676 TSC_hg19_v1_chr14_-_77608072	112812	-	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22	0.0	
chr20	741730	741860	reg1028627.p1	5.114	+	AY129025 NM_033129	-84973	-	AK125343 TSC_hg19_v1_chr20_-_656445	-85350	-	TSC_hg19_v1_chr20_-_633845 AK127435 AL833944 NM_080725	-107929	-	AK074650 BC009750 AK291706 NM_033409	7382	-	AK314165 NM_001042353 TSC_hg19_v1_chr20_+_814388	72589	+	BC004222 NM_207121	74915	+	AY129025|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)##NM_033129|SCRT2|85508|scratch homolog 2, zinc finger protein (Drosophila)##AK127435|SRXN1|140809|sulfiredoxin 1##AL833944|SRXN1|140809|sulfiredoxin 1##NM_080725|SRXN1|140809|sulfiredoxin 1##AK074650|C20orf54|113278|chromosome 20 open reading frame 54##BC009750|C20orf54|113278|chromosome 20 open reading frame 54##AK291706|C20orf54|113278|chromosome 20 open reading frame 54##NM_033409|C20orf54|113278|chromosome 20 open reading frame 54##AK314165|FAM110A|83541|family with sequence similarity 110, member A##NM_001042353|FAM110A|83541|family with sequence similarity 110, member A##BC004222|FAM110A|83541|family with sequence similarity 110, member A##NM_207121|FAM110A|83541|family with sequence similarity 110, member A	0.990951	CTCF.p2:-2:0.991
chr9	102972295	102972459	reg1023677.p1	5.114	+	TSC_hg19_v1_chr9_+_102861574 BC006370 BC111761 BC112351	-110756	+	AF039217 TSC_hg19_v1_chr9_+_102861540 BC063847 AK304851 BC072429 BC110864	-110837	+	TSC_hg19_v1_chr9_+_102861524 BC041665 NM_014425 NM_183245 AK312795	-110896	+	AK302619 NM_001161584	142475	-	BC030652 TSC_hg19_v1_chr9_-_103115211 AK304869 AK000294 AB060968 AK303662 AK298916 NM_017746	142808	-	BC042955 TSC_hg19_v1_chr9_+_103115352 AK056351	142983	+	BC006370|INVS|27130|inversin##BC111761|INVS|27130|inversin##BC112351|INVS|27130|inversin##AF039217|INVS|27130|inversin##BC063847|INVS|27130|inversin##AK304851|INVS|27130|inversin##BC072429|INVS|27130|inversin##BC041665|INVS|27130|inversin##NM_014425|INVS|27130|inversin##NM_183245|INVS|27130|inversin##AK312795|INVS|27130|inversin##AK302619|TEX10|54881|testis expressed 10##NM_001161584|TEX10|54881|testis expressed 10##BC030652|TEX10|54881|testis expressed 10##AK304869|TEX10|54881|testis expressed 10##AK000294|TEX10|54881|testis expressed 10##AB060968|TEX10|54881|testis expressed 10##AK303662|TEX10|54881|testis expressed 10##AK298916|TEX10|54881|testis expressed 10##NM_017746|TEX10|54881|testis expressed 10	0.0	
chr10	106374142	106374256	reg1028846.p2	5.113	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-260658	+	AB051541 TSC_hg19_v1_chr10_-_106098200 AK129877	-276010	-	BC070108 NM_033397	-280537	-	AB028982 NM_014978	26659	+	BC117417 TSC_hg19_v1_chr10_+_106401047	26846	+	TSC_hg19_v1_chr10_-_108459000 AK123752	2084860	-	BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AB051541|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##BC070108|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##NM_033397|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	0.970069	CTCF.p2:-3:0.970
chr11	612142	612227	reg1037034.p2	5.113	+	NM_020901 TSC_hg19_v1_chr11_+_576482 AB040975 BC146771 AK308541 BC136615 BC144293 BC144294 BC144295 BC112931	-35679	+	TSC_hg19_v1_chr11_-_575850 AK057794 AK123970	-36318	-	AK123483 TSC_hg19_v1_chr11_-_568468	-43740	-	AF076494 NM_004031	3504	-	U53830 U53831 U53832 U73036 TSC_hg19_v1_chr11_-_615951 AK303752	3752	-	NM_001572 NM_004029 TSC_hg19_v1_chr11_-_616001	3817	-	NM_020901|PHRF1|57661|PHD and ring finger domains 1##AB040975|PHRF1|57661|PHD and ring finger domains 1##BC146771|PHRF1|57661|PHD and ring finger domains 1##AK308541|PHRF1|57661|PHD and ring finger domains 1##BC136615|PHRF1|57661|PHD and ring finger domains 1##BC144293|PHRF1|57661|PHD and ring finger domains 1##BC144294|PHRF1|57661|PHD and ring finger domains 1##BC144295|PHRF1|57661|PHD and ring finger domains 1##BC112931|PHRF1|57661|PHD and ring finger domains 1##AK057794|LOC143666|143666|uncharacterized LOC143666##AK123970|LOC143666|143666|uncharacterized LOC143666##AK123483|MIR210HG|100506211|MIR210 host gene (non-protein coding)##AF076494|IRF7|3665|interferon regulatory factor 7##NM_004031|IRF7|3665|interferon regulatory factor 7##U53830|IRF7|3665|interferon regulatory factor 7##U53831|IRF7|3665|interferon regulatory factor 7##U53832|IRF7|3665|interferon regulatory factor 7##U73036|IRF7|3665|interferon regulatory factor 7##AK303752|IRF7|3665|interferon regulatory factor 7##NM_001572|IRF7|3665|interferon regulatory factor 7##NM_004029|IRF7|3665|interferon regulatory factor 7	0.0	
chr3	45874345	45874478	reg1029714.p1	5.113	+	TSC_hg19_v1_chr3_-_45838112 AF125107	-36263	-	BC036073 TSC_hg19_v1_chr3_-_45838029 NM_020208 NM_022405	-36381	-	AF075260 HQ258580 AJ276207 AJ276208 BC126197 BC136431 BC144087 TSC_hg19_v1_chr3_-_45838004	-36453	-	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	9184	-	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	53644	+	NM_006564 Y13248	110561	+	AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC036073|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_020208|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_022405|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##AF075260|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##HQ258580|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##AJ276207|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##AJ276208|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC126197|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC136431|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC144087|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6	0.861837	CTCF.p2:-21:0.862
chr9	136859319	136859420	reg1000028.p4	5.113	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	-1923	-	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-254383	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-255891	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	73824	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	74257	-	NM_017588 TSC_hg19_v1_chr9_+_137001212	141841	+	BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3##NM_017588|WDR5|11091|WD repeat domain 5	0.0	
chr10	38043758	38043876	reg1024776.p1	5.112	+	NM_001190489	-151959	-	AF269087 NM_052997	-629033	+	AB587328 AB043703 NM_031866	-2113458	-	BC132915 BC132917 BC110869 BC021819 AJ491695 AJ492196 NM_021045 TSC_hg19_v1_chr10_-_38146539	102601	-	BC146820 TSC_hg19_v1_chr10_-_38147013 AK299357	103182	-	AJ491696 NM_145011 TSC_hg19_v1_chr10_-_38265576 AK122958 BC036038 AK056452 AX721125	221710	-	NM_001190489|MTRNR2L7|100288485|MT-RNR2-like 7##AF269087|ANKRD30A|91074|ankyrin repeat domain 30A##NM_052997|ANKRD30A|91074|ankyrin repeat domain 30A##AB043703|FZD8|8325|frizzled family receptor 8##NM_031866|FZD8|8325|frizzled family receptor 8##BC132915|ZNF248|57209|zinc finger protein 248##BC132917|ZNF248|57209|zinc finger protein 248##BC110869|ZNF248|57209|zinc finger protein 248##BC021819|ZNF248|57209|zinc finger protein 248##AJ491695|ZNF248|57209|zinc finger protein 248##AJ492196|ZNF248|57209|zinc finger protein 248##NM_021045|ZNF248|57209|zinc finger protein 248##BC146820|ZNF248|57209|zinc finger protein 248##AK299357|ZNF248|57209|zinc finger protein 248##AJ491696|ZNF25|219749|zinc finger protein 25##NM_145011|ZNF25|219749|zinc finger protein 25##AK122958|ZNF25|219749|zinc finger protein 25##BC036038|ZNF25|219749|zinc finger protein 25##AK056452|ZNF25|219749|zinc finger protein 25	0.907142	CTCF.p2:36:0.815
chr18	72143519	72143623	reg1027619.p1	5.112	+	TSC_hg19_v1_chr18_-_72124545 NM_001044369	-19042	-	CR749350 NM_001174123	-160462	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	-184392	-	TSC_hg19_v1_chr18_+_72163567 NM_018235	19887	+	TSC_hg19_v1_chr18_+_72163611 AK001692 AK300904 AK298309 BC001375	20044	+	TSC_hg19_v1_chr18_+_72166580 AK097155	23024	+	NM_001044369|FAM69C|125704|family with sequence similarity 69, member C##CR749350|C18orf63|644041|chromosome 18 open reading frame 63##NM_001174123|C18orf63|644041|chromosome 18 open reading frame 63##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_018235|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK001692|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK300904|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK298309|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##BC001375|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK097155|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)	0.0	
chr5	158368094	158368274	reg1024232.p2	5.112	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1082094	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-1183804	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-1197444	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	158273	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	158558	-	AK304228 NM_001199382	266464	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.0	
chr6	120699871	120700009	reg1029672.p1	5.112	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-1029019	-	BX538186 AK091682 AX747126 NM_001100411	-1229594	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-1300032	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	955703	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	1056885	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	2020755	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.022877	
chr8	27182446	27182513	reg1000967.p5	5.112	+	NM_004103 D45853 U43522	-2556	+	TSC_hg19_v1_chr8_+_27169015 BC036651 NM_173174	-13478	+	TSC_hg19_v1_chr8_-_27168793 AB029021 AF492463 BC018337 NM_171982	-13671	-	NM_173176 TSC_hg19_v1_chr8_+_27183022	538	+	TSC_hg19_v1_chr8_+_27183049 BC042599	573	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	598	+	NM_004103|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##D45853|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##U43522|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC036651|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173174|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB029021|TRIM35|23087|tripartite motif containing 35##AF492463|TRIM35|23087|tripartite motif containing 35##BC018337|TRIM35|23087|tripartite motif containing 35##NM_171982|TRIM35|23087|tripartite motif containing 35##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta	0.0	
chr15	73089263	73089373	reg1026803.p1	5.111	+	TSC_hg19_v1_chr15_-_73076118 AK055526 NM_031284	-13195	-	BC044589 TSC_hg19_v1_chr15_-_73076072	-13247	-	TSC_hg19_v1_chr15_-_73076063 BC006112	-13253	-	NM_001172623 NM_001172624 NM_002499 U61262 U72391 BC117161 BC143270 BC143271 BC143279 AB528479	255602	+	TSC_hg19_v1_chr15_-_73661207 AJ132429 DQ854814	571889	-	AJ238850 NM_005477	572286	-	AK055526|ADPGK|83440|ADP-dependent glucokinase##NM_031284|ADPGK|83440|ADP-dependent glucokinase##BC044589|ADPGK|83440|ADP-dependent glucokinase##BC006112|ADPGK|83440|ADP-dependent glucokinase##NM_001172623|NEO1|4756|neogenin 1##NM_001172624|NEO1|4756|neogenin 1##NM_002499|NEO1|4756|neogenin 1##U61262|NEO1|4756|neogenin 1##U72391|NEO1|4756|neogenin 1##BC117161|NEO1|4756|neogenin 1##BC143270|NEO1|4756|neogenin 1##BC143271|NEO1|4756|neogenin 1##BC143279|NEO1|4756|neogenin 1##AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4	0.739511	CTCF.p2:-4:0.740
chr19	18699474	18699590	reg1027493.p1	5.111	+	NM_001033930 NM_003333 TSC_hg19_v1_chr19_+_18682666 AF348700 BC101830 BC101832 BC143668 D28425 AK314717	-16875	+	TSC_hg19_v1_chr19_+_18668679 AF173381	-30858	+	NM_001171948 NM_001171949 NM_024069 TSC_hg19_v1_chr19_+_18668584 AK125365 AK098346 BC001080 BC006479	-30922	+	NM_001100418 NM_001100419 TSC_hg19_v1_chr19_+_18699611 BC012078 AK000857 AK091925 AX747258 AK054670	35	+	EU832355 EU832440 AF178684 TSC_hg19_v1_chr19_-_18717548	17988	-	TSC_hg19_v1_chr19_-_18717610 AF059293 BC044634 AY358291	18071	-	NM_001033930|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##NM_003333|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##AF348700|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##BC101830|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##BC101832|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##BC143668|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##AK314717|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##AF173381|KXD1|79036|KxDL motif containing 1##NM_001171948|KXD1|79036|KxDL motif containing 1##NM_001171949|KXD1|79036|KxDL motif containing 1##NM_024069|KXD1|79036|KxDL motif containing 1##AK125365|KXD1|79036|KxDL motif containing 1##AK098346|KXD1|79036|KxDL motif containing 1##BC001080|KXD1|79036|KxDL motif containing 1##BC006479|KXD1|79036|KxDL motif containing 1##NM_001100418|C19orf60|55049|chromosome 19 open reading frame 60##NM_001100419|C19orf60|55049|chromosome 19 open reading frame 60##BC012078|C19orf60|55049|chromosome 19 open reading frame 60##AK000857|C19orf60|55049|chromosome 19 open reading frame 60##AK091925|C19orf60|55049|chromosome 19 open reading frame 60##AK054670|C19orf60|55049|chromosome 19 open reading frame 60##EU832355|CRLF1|9244|cytokine receptor-like factor 1##EU832440|CRLF1|9244|cytokine receptor-like factor 1##AF178684|CRLF1|9244|cytokine receptor-like factor 1##AF059293|CRLF1|9244|cytokine receptor-like factor 1##BC044634|CRLF1|9244|cytokine receptor-like factor 1##AY358291|CRLF1|9244|cytokine receptor-like factor 1	0.901851	CTCF.p2:21:0.902
chr5	142473857	142474037	reg1027453.p2	5.111	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-323639	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-323975	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-396376	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	308876	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	309159	-	BC015610 TSC_hg19_v1_chr5_-_142783214	309264	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.936811	CTCF.p2:46:0.924
chrX	46513035	46513203	reg1028025.p2	5.111	+	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	-79841	+	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	-108175	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	-108263	-	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	105410	-	TSC_hg19_v1_chrX_-_46618608 BC094742	105511	-	NM_006915 AJ007590 TSC_hg19_v1_chrX_+_46696391 BC027851	183258	+	NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##BC094742|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	0.994107	CTCF.p2:-3:0.994
chr15	79631078	79631200	reg1028006.p1	5.110	+	TSC_hg19_v1_chr15_+_79603557 AJ132270 CR457384	-27572	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	-27636	+	TSC_hg19_v1_chr15_+_79603465 BC111547 BC010853 AK222516 BC022232 AK289434 AK297710 NM_007364 BC017495 AL109672 AY358974 BC000027	-27678	+	AB028947 NM_015206 BC152466	93720	+	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	558241	-	NM_001199758	558487	-	AJ132270|TMED3|23423|transmembrane emp24 protein transport domain containing 3##CR457384|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC111547|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC010853|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK222516|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC022232|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK289434|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK297710|TMED3|23423|transmembrane emp24 protein transport domain containing 3##NM_007364|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC017495|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AL109672|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AY358974|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC000027|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)	0.830068	CTCF.p2:-11:0.830
chr16	29675627	29675729	reg1026527.p2	5.110	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-664	+	TSC_hg19_v1_chr16_+_29674568 J04168 J04536 NM_003123	-1105	+	TSC_hg19_v1_chr16_+_29674567 AK292626 AK313750	-1113	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	14716	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	14804	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	81623	-	DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##J04536|SPN|6693|sialophorin##NM_003123|SPN|6693|sialophorin##AK292626|SPN|6693|sialophorin##AK313750|SPN|6693|sialophorin##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54	0.0	
chr18	47577783	47577928	reg1027639.p1	5.110	+	TSC_hg19_v1_chr18_-_47376221 BC033527	-201666	-	TSC_hg19_v1_chr18_+_47340396 AK123464	-237464	+	TSC_hg19_v1_chr18_-_47340253 AK054673 NM_006111 AK314462	-237585	-	AB384567 AB032945 TSC_hg19_v1_chr18_-_47721518 AB290160 BC032511 NM_001080467	143517	-	AB527886 BC030606 NM_145020 AK302114	214977	-	AF078830 AF078831 AF078832 AF078833 EF488685 AB527669 NM_001204151	228518	-	BC033527|MYO5B|4645|myosin VB##AK054673|ACAA2|10449|acetyl-CoA acyltransferase 2##NM_006111|ACAA2|10449|acetyl-CoA acyltransferase 2##AK314462|ACAA2|10449|acetyl-CoA acyltransferase 2##AB032945|MYO5B|4645|myosin VB##AB290160|MYO5B|4645|myosin VB##BC032511|MYO5B|4645|myosin VB##NM_001080467|MYO5B|4645|myosin VB##BC030606|CCDC11|220136|coiled-coil domain containing 11##NM_145020|CCDC11|220136|coiled-coil domain containing 11##AK302114|CCDC11|220136|coiled-coil domain containing 11##AF078830|MBD1|4152|methyl-CpG binding domain protein 1##AF078831|MBD1|4152|methyl-CpG binding domain protein 1##AF078832|MBD1|4152|methyl-CpG binding domain protein 1##AF078833|MBD1|4152|methyl-CpG binding domain protein 1##EF488685|MBD1|4152|methyl-CpG binding domain protein 1##NM_001204151|MBD1|4152|methyl-CpG binding domain protein 1	0.266719	CTCF.p2:-12:0.267
chr9	4849642	4849739	reg1026347.p1	5.110	+	TSC_hg19_v1_chr9_+_4839769 EF553527	-9922	+	TSC_hg19_v1_chr9_+_4792995 AJ276894 EU831474 EU831561 AF067172	-56647	+	TSC_hg19_v1_chr9_+_4792936 AK022904 BC001025 AK225872	-56767	+	TSC_hg19_v1_chr9_+_4985085 AK292525	135397	+	TSC_hg19_v1_chr9_+_4985271 AF005216 NM_004972 AF058925	135569	+	AF135824 HQ258002 AF156094 NM_007179 BC126473 BC126475	335923	-	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1##AJ276894|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831474|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831561|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF067172|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK022904|RCL1|10171|RNA terminal phosphate cyclase-like 1##BC001025|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK225872|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK292525|JAK2|3717|Janus kinase 2##AF005216|JAK2|3717|Janus kinase 2##NM_004972|JAK2|3717|Janus kinase 2##AF058925|JAK2|3717|Janus kinase 2##AF135824|INSL6|11172|insulin-like 6##HQ258002|INSL6|11172|insulin-like 6##AF156094|INSL6|11172|insulin-like 6##NM_007179|INSL6|11172|insulin-like 6##BC126473|INSL6|11172|insulin-like 6##BC126475|INSL6|11172|insulin-like 6	0.07401	
chrX	142525413	142525530	reg1025980.p1	5.110	+	BC130503 BC130505 NM_001009613 HQ258561 DQ336126 DQ336127	-411720	+	AF151378 AF196482 AF116194 AK313591 BC013318 NM_016249	-1232406	-	NM_005462 AF056334 BC025969	-1533800	+	DQ336128 DQ336129 BC062750 NM_001009609	79791	-	AK315044 NM_001184750	196847	-	TSC_hg19_v1_chrX_-_142722880 BC040986 NM_173078	197472	-	BC130503|SPANXN4|441525|SPANX family, member N4##BC130505|SPANXN4|441525|SPANX family, member N4##NM_001009613|SPANXN4|441525|SPANX family, member N4##HQ258561|SPANXN4|441525|SPANX family, member N4##DQ336126|SPANXN4|441525|SPANX family, member N4##DQ336127|SPANXN4|441525|SPANX family, member N4##AF151378|MAGEC2|51438|melanoma antigen family C, 2##AF196482|MAGEC2|51438|melanoma antigen family C, 2##AF116194|MAGEC2|51438|melanoma antigen family C, 2##AK313591|MAGEC2|51438|melanoma antigen family C, 2##BC013318|MAGEC2|51438|melanoma antigen family C, 2##NM_016249|MAGEC2|51438|melanoma antigen family C, 2##NM_005462|MAGEC1|9947|melanoma antigen family C, 1##AF056334|MAGEC1|9947|melanoma antigen family C, 1##BC025969|MAGEC1|9947|melanoma antigen family C, 1##DQ336128|SPANXN3|139067|SPANX family, member N3##DQ336129|SPANXN3|139067|SPANX family, member N3##BC062750|SPANXN3|139067|SPANX family, member N3##NM_001009609|SPANXN3|139067|SPANX family, member N3##AK315044|SLITRK4|139065|SLIT and NTRK-like family, member 4##NM_001184750|SLITRK4|139065|SLIT and NTRK-like family, member 4##BC040986|SLITRK4|139065|SLIT and NTRK-like family, member 4##NM_173078|SLITRK4|139065|SLIT and NTRK-like family, member 4	0.41477	CTCF.p2:-40:0.415
chr11	122667106	122667207	reg1003022.p2	5.109	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	-140609	+	BC130361 BC130363 AF303179 NM_001001786	-680295	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-1206058	+	BC070266 AK313578 AF001622 NM_019604	42073	+	AK097534 BC068507 NM_024806 NM_199124	86275	+	AB231738 NM_001098169	185200	-	NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63##AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox	0.0	
chr15	92748777	92748868	reg1025253.p1	5.109	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-351255	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	-351725	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	-351879	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	188377	+	AK057393 NM_153040	266084	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	450057	-	AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B	0.264982	CTCF.p2:13:0.265
chr17	4278654	4278835	reg1020446.p2	5.109	+	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	-8836	-	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	-9033	-	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	-111593	-	AK172832 NM_182538 TSC_hg19_v1_chr17_+_4337247 BC023646	58498	+	NM_001124758 BC041772 TSC_hg19_v1_chr17_+_4402177 AB441165	123492	+	EU832503 BC050546 TSC_hg19_v1_chr17_-_4458680 AF147709 AK303150 AK301622 AK307948 NM_001105538 NM_014520	179930	-	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK172832|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_182538|SPNS3|201305|spinster homolog 3 (Drosophila)##BC023646|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_001124758|SPNS2|124976|spinster homolog 2 (Drosophila)##BC041772|SPNS2|124976|spinster homolog 2 (Drosophila)##AB441165|SPNS2|124976|spinster homolog 2 (Drosophila)##EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a##BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a##AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a##AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a##AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a##AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a	0.0	
chr18	45991729	45991838	reg1026049.p1	5.109	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-56074	-	AM988836 AK296709 NM_001039360 EF120357	-328084	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	-534294	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	73990	+	AK131394 NM_001190823	477364	-	AK301535 NM_001190822	483919	-	AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7	0.998387	CTCF.p2:-6:0.998
chr2	111506149	111506268	reg1026041.p1	5.109	+	AK300513 NM_001142807 BC022268	-16029	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-70386	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-70565	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	372279	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	1135418	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	1135553	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.0	
chr2	168976154	168976272	reg1018440.p3	5.109	+	NM_020981	-301032	+	EF119711 EF119717 NM_001199144 NM_001199145	-932421	+	EF119718 EF119719 EF119720 EF119721 EF119722 NM_001079810 NM_001199143 NM_152381 AK097519	-1231217	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	127860	-	TSC_hg19_v1_chr2_+_169312764 AK172775	336546	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	336662	+	NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##EF119718|XIRP2|129446|xin actin-binding repeat containing 2##EF119719|XIRP2|129446|xin actin-binding repeat containing 2##EF119720|XIRP2|129446|xin actin-binding repeat containing 2##EF119721|XIRP2|129446|xin actin-binding repeat containing 2##EF119722|XIRP2|129446|xin actin-binding repeat containing 2##NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199143|XIRP2|129446|xin actin-binding repeat containing 2##NM_152381|XIRP2|129446|xin actin-binding repeat containing 2##AK097519|XIRP2|129446|xin actin-binding repeat containing 2##BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##AK172775|CERS6|253782|ceramide synthase 6##NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6	0.99886	CTCF.p2:4:0.999
chr6	56435523	56435618	reg1010412.p1	5.109	+	BC038763 TSC_hg19_v1_chr6_-_56407722	-27862	-	AF330693 TSC_hg19_v1_chr6_-_56258945	-176646	-	TSC_hg19_v1_chr6_-_56112350 BC045597 AF414088 AL136624 AK313398 NM_030820	-323209	-	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	72069	-	TSC_hg19_v1_chr6_-_56708446 U31850	272902	-	AK294830 TSC_hg19_v1_chr6_-_56716493	280882	-	AF330693|COL21A1|81578|collagen, type XXI, alpha 1##BC045597|COL21A1|81578|collagen, type XXI, alpha 1##AF414088|COL21A1|81578|collagen, type XXI, alpha 1##AL136624|COL21A1|81578|collagen, type XXI, alpha 1##AK313398|COL21A1|81578|collagen, type XXI, alpha 1##NM_030820|COL21A1|81578|collagen, type XXI, alpha 1##AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin##U31850|DST|667|dystonin##AK294830|DST|667|dystonin	0.0	
chr10	107949152	107949264	reg1027486.p1	5.108	+	BC117417 TSC_hg19_v1_chr10_+_106401047	-1548163	+	AB028982 NM_014978	-1548350	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-1835667	+	TSC_hg19_v1_chr10_-_108459000 AK123752	509851	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	975168	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	3734001	-	BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	1.07434	CTCF.p2:4:0.998
chr12	96464854	96465015	reg1026445.p2	5.108	+	AK301308 TSC_hg19_v1_chr12_-_96429399 AK310522 AK293630	-35519	-	CR457068 AB590523 AB209740 J02959 TSC_hg19_v1_chr12_-_96429366 BC032528 J03459 NM_000895 AK308184	-35601	-	BC096096 BC096097 BC096098 BC096099 D16626 AK303544 NM_002108 AK298736 AK297004 TSC_hg19_v1_chr12_-_96390137	-74860	-	TSC_hg19_v1_chr12_+_96588154 NM_005230 Z36715 AK312694	123192	+	TSC_hg19_v1_chr12_+_96588254 BC017371	123333	+	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	329049	-	AK301308|LTA4H|4048|leukotriene A4 hydrolase##AK293630|LTA4H|4048|leukotriene A4 hydrolase##CR457068|LTA4H|4048|leukotriene A4 hydrolase##AB209740|LTA4H|4048|leukotriene A4 hydrolase##J02959|LTA4H|4048|leukotriene A4 hydrolase##BC032528|LTA4H|4048|leukotriene A4 hydrolase##J03459|LTA4H|4048|leukotriene A4 hydrolase##NM_000895|LTA4H|4048|leukotriene A4 hydrolase##AK308184|LTA4H|4048|leukotriene A4 hydrolase##BC096096|HAL|3034|histidine ammonia-lyase##BC096097|HAL|3034|histidine ammonia-lyase##BC096098|HAL|3034|histidine ammonia-lyase##BC096099|HAL|3034|histidine ammonia-lyase##D16626|HAL|3034|histidine ammonia-lyase##AK303544|HAL|3034|histidine ammonia-lyase##NM_002108|HAL|3034|histidine ammonia-lyase##AK298736|HAL|3034|histidine ammonia-lyase##AK297004|HAL|3034|histidine ammonia-lyase##NM_005230|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##Z36715|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK312694|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17	0.737033	CTCF.p2:0:0.737
chr1	9687301	9687482	reg1000875.p3	5.108	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-38435	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-87755	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	-87859	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	24413	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	196504	-	TSC_hg19_v1_chr1_-_9884023 AK304813	196630	-	BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1	0.0	
chr5	158325550	158325727	reg1023097.p3	5.108	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1039548	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-1141258	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-1154898	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	200819	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	201104	-	AK304228 NM_001199382	309010	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.0	
chr8	101506731	101506912	reg1022928.p1	5.108	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-184536	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-184640	-	AB271913 AB271914 AB029316 NM_015435	-191350	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	65119	-	AK093906 AX748361 NM_152628	155071	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	226985	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr10	120000695	120000875	reg1001754.p1	5.107	+	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	-194355	+	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	-194741	-	TSC_hg19_v1_chr10_+_119302713 AB463605	-698042	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	101039	-	AK313269 AK290461 NM_004248	354373	-	CU691560 TSC_hg19_v1_chr10_-_120514298	513502	-	BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A##AK313269|PRLHR|2834|prolactin releasing hormone receptor##AK290461|PRLHR|2834|prolactin releasing hormone receptor##NM_004248|PRLHR|2834|prolactin releasing hormone receptor	0.0	
chr15	54184203	54184325	reg1029738.p1	5.107	+	AK096055 BX537884 NM_182758	-132417	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-1102070	-	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	-1213383	-	NM_001080534	120836	+	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	1304828	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	1304915	-	AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1	0.970964	CTCF.p2:3:0.871
chr19	17552121	17552242	reg1028580.p2	5.107	+	TSC_hg19_v1_chr19_+_17530872 BC011840 NM_138401 BC007883	-21282	+	TSC_hg19_v1_chr19_+_17530855 AK057057 AK289487	-21333	+	AK311380 AK055623 TSC_hg19_v1_chr19_+_17516630	-35615	+	NM_001190844	7194	-	BC014127 NM_138454 DQ426894	19562	-	AK294238 TSC_hg19_v1_chr19_+_17579599	27407	+	BC011840|FAM125A|93343|family with sequence similarity 125, member A##NM_138401|FAM125A|93343|family with sequence similarity 125, member A##BC007883|FAM125A|93343|family with sequence similarity 125, member A##AK057057|FAM125A|93343|family with sequence similarity 125, member A##AK289487|FAM125A|93343|family with sequence similarity 125, member A##AK311380|LOC100507535|100507535|uncharacterized LOC100507535##AK055623|LOC100507535|100507535|uncharacterized LOC100507535##NM_001190844|TMEM221|100130519|transmembrane protein 221##BC014127|NXNL1|115861|nucleoredoxin-like 1##NM_138454|NXNL1|115861|nucleoredoxin-like 1##DQ426894|NXNL1|115861|nucleoredoxin-like 1##AK294238|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1	0.934608	CTCF.p2:-28:0.935
chr19	55644219	55644335	reg1023159.p1	5.107	+	AB209452 TSC_hg19_v1_chr19_-_55629006 AF312028 NM_017607	-15345	-	AK000265 AK301615 NM_017729 BC015763 CU677435	-52468	+	AK309305 NM_133180 AF370395 AK075098 AK296732	-57032	+	TSC_hg19_v1_chr19_-_55658311 AY762903 AY762904 BT019630 S51938	14140	-	S69208 S69209 BC022086 BC010963 AK291352 AK308199 BC007074 BC034143 BC107798 M19308 M19309 TSC_hg19_v1_chr19_-_55660575 NM_001126132 NM_001126133 NM_003283	16304	-	BT019517 CR541985 CR542012 M64247 BC096165 BC096166 BC096167 BC099631 X54163 AK223451 EU747720 NM_000363	24750	-	AB209452|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##AF312028|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##NM_017607|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##AK000265|EPS8L1|54869|EPS8-like 1##AK301615|EPS8L1|54869|EPS8-like 1##NM_017729|EPS8L1|54869|EPS8-like 1##BC015763|EPS8L1|54869|EPS8-like 1##AK309305|EPS8L1|54869|EPS8-like 1##NM_133180|EPS8L1|54869|EPS8-like 1##AF370395|EPS8L1|54869|EPS8-like 1##AK075098|EPS8L1|54869|EPS8-like 1##AK296732|EPS8L1|54869|EPS8-like 1##AY762903|TNNT1|7138|troponin T type 1 (skeletal, slow)##AY762904|TNNT1|7138|troponin T type 1 (skeletal, slow)##BT019630|TNNT1|7138|troponin T type 1 (skeletal, slow)##S51938|TNNT1|7138|troponin T type 1 (skeletal, slow)##S69208|TNNT1|7138|troponin T type 1 (skeletal, slow)##S69209|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC022086|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC010963|TNNT1|7138|troponin T type 1 (skeletal, slow)##AK291352|TNNT1|7138|troponin T type 1 (skeletal, slow)##AK308199|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC007074|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC034143|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC107798|TNNT1|7138|troponin T type 1 (skeletal, slow)##M19308|TNNT1|7138|troponin T type 1 (skeletal, slow)##M19309|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_001126132|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_001126133|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_003283|TNNT1|7138|troponin T type 1 (skeletal, slow)##BT019517|TNNI3|7137|troponin I type 3 (cardiac)##CR541985|TNNI3|7137|troponin I type 3 (cardiac)##CR542012|TNNI3|7137|troponin I type 3 (cardiac)##M64247|TNNI3|7137|troponin I type 3 (cardiac)##BC096165|TNNI3|7137|troponin I type 3 (cardiac)##BC096166|TNNI3|7137|troponin I type 3 (cardiac)##BC096167|TNNI3|7137|troponin I type 3 (cardiac)##BC099631|TNNI3|7137|troponin I type 3 (cardiac)##X54163|TNNI3|7137|troponin I type 3 (cardiac)##AK223451|TNNI3|7137|troponin I type 3 (cardiac)##EU747720|TNNI3|7137|troponin I type 3 (cardiac)##NM_000363|TNNI3|7137|troponin I type 3 (cardiac)	0.043637	
chr2	219575498	219575679	reg1030020.p1	5.107	+	TSC_hg19_v1_chr2_+_219536837 NM_001243313 NM_015690 AB033104 BC026158	-38797	+	AB527514 CU677361 TSC_hg19_v1_chr2_-_219536703 BC015612 AK023968 BC028167 AK222525 AK289501 NM_022453	-38852	-	TSC_hg19_v1_chr2_+_219524452 BC000416 BC007500 AF026849 AK096210	-51113	+	TSC_hg19_v1_chr2_+_219575602 AK302728 NM_014640 AK291770 BC021707 AL833511	5	+	TSC_hg19_v1_chr2_+_219575684 D79995	119	+	TSC_hg19_v1_chr2_+_219646471 AK226039 NM_000784 BC017044	70886	+	NM_001243313|STK36|27148|serine/threonine kinase 36##NM_015690|STK36|27148|serine/threonine kinase 36##AB033104|STK36|27148|serine/threonine kinase 36##BC026158|STK36|27148|serine/threonine kinase 36##BC015612|RNF25|64320|ring finger protein 25##AK023968|RNF25|64320|ring finger protein 25##BC028167|RNF25|64320|ring finger protein 25##AK222525|RNF25|64320|ring finger protein 25##AK289501|RNF25|64320|ring finger protein 25##NM_022453|RNF25|64320|ring finger protein 25##BC000416|BCS1L|617|BCS1-like (S. cerevisiae)##BC007500|BCS1L|617|BCS1-like (S. cerevisiae)##AF026849|BCS1L|617|BCS1-like (S. cerevisiae)##AK096210|BCS1L|617|BCS1-like (S. cerevisiae)##AK302728|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##NM_014640|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##AK291770|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##BC021707|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##AL833511|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##D79995|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	0.0	
chr2	57604280	57604366	reg1023206.p1	5.107	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-1191414	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-1192557	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-1193118	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	669431	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	669665	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	864159	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.933563	CTCF.p2:-12:0.934
chr4	55299980	55300119	reg1032785.p1	5.107	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-204585	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-204769	+	AB028838 EU596451 NM_133267	-333827	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	224085	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	691705	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	912367	+	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB028838|GSX2|170825|GS homeobox 2##EU596451|GSX2|170825|GS homeobox 2##NM_133267|GSX2|170825|GS homeobox 2##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3	0.982061	CTCF.p2:1:0.982
chr4	90871080	90871199	reg1025352.p1	5.107	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-55077	+	NM_001146055	-111693	-	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	-112897	-	AK097436 NM_001145065 AK310825 AB051467 BC021681	177579	+	BC051694 NM_207491	285042	+	AB209318 NM_001510 AK308611	2354453	+	AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##NM_001146055|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2	0.901789	CTCF.p2:-12:0.902
chr4	93084760	93084826	reg1033491.p1	5.107	+	BC051694 NM_207491	-1928612	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-2036075	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-2268731	+	AB209318 NM_001510 AK308611	140799	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	1665268	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	2044018	+	BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.0	
chr6_mcf_hap5	2080638	2080738	reg1025070.p1	5.107	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.996692	CTCF.p2:4:0.997
chr7	78216907	78217011	reg1028447.p2	5.107	+	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-747450	+	BC067742 TSC_hg19_v1_chr7_+_77428204 AL136883	-788749	+	TSC_hg19_v1_chr7_+_77428194 NM_001127358 NM_001127360 AK225854 AK090643 AX746556 AK308289	-788818	+	AB014605 BC150277 AK297353 AF038563 NM_012301	865920	-	TSC_hg19_v1_chr7_+_79083303 AK311103	866198	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	1547180	+	BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##BC067742|PHTF2|57157|putative homeodomain transcription factor 2##AL136883|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2##AK225854|PHTF2|57157|putative homeodomain transcription factor 2##AK090643|PHTF2|57157|putative homeodomain transcription factor 2##AK308289|PHTF2|57157|putative homeodomain transcription factor 2##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1	0.343678	CTCF.p2:-3:0.344
chr10	64354115	64354296	reg1001935.p2	5.106	+	AJ505150 NM_199452	-73999	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-220162	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-325666	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	210337	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	210452	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	221892	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.0	
chr11	105480098	105480205	reg1024326.p2	5.106	+	NM_021571	-469691	-	X65019 AY660536 AY761064 M87507 NM_001007232 NM_001223 NM_033292 NM_033293 NM_033294 NM_033295	-507999	-	AY885669 TSC_hg19_v1_chr11_-_104916063 BC104635 BC070196 NM_001017534 NM_052889 AK311902 AK125640 BC117478 BC117480	-564080	-	NM_000829 NM_001077243 NM_001077244 TSC_hg19_v1_chr11_+_105480799 BC045546 BC142654 BC150209 BC035610	738	+	BC015199 NM_001112812 BC146816	1279	+	TSC_hg19_v1_chr11_-_105892952 AL834523 BC041118 AB058729 NM_032424	412808	-	NM_021571|CARD18|59082|caspase recruitment domain family, member 18##X65019|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##AY660536|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##AY761064|CARD17|440068|caspase recruitment domain family, member 17##M87507|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##NM_001007232|CARD17|440068|caspase recruitment domain family, member 17##NM_001223|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##NM_033292|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##NM_033293|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##NM_033294|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##NM_033295|CASP1|834|caspase 1, apoptosis-related cysteine peptidase (interleukin 1, beta, convertase)##AY885669|CARD16|114769|caspase recruitment domain family, member 16##BC104635|CARD16|114769|caspase recruitment domain family, member 16##BC070196|CARD16|114769|caspase recruitment domain family, member 16##NM_001017534|CARD16|114769|caspase recruitment domain family, member 16##NM_052889|CARD16|114769|caspase recruitment domain family, member 16##AK311902|CARD16|114769|caspase recruitment domain family, member 16##AK125640|CARD16|114769|caspase recruitment domain family, member 16##BC117478|CARD16|114769|caspase recruitment domain family, member 16##BC117480|CARD16|114769|caspase recruitment domain family, member 16##NM_000829|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##NM_001077243|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##NM_001077244|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##BC045546|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##BC142654|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##BC150209|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##BC035610|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##BC015199|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##NM_001112812|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##BC146816|GRIA4|2893|glutamate receptor, ionotrophic, AMPA 4##AL834523|KIAA1826|84437|KIAA1826##BC041118|KIAA1826|84437|KIAA1826##AB058729|KIAA1826|84437|KIAA1826##NM_032424|KIAA1826|84437|KIAA1826	0.041509	
chr11	13136575	13136722	reg1036104.p1	5.106	+	TSC_hg19_v1_chr11_+_13030883 NM_001080521	-105724	+	TSC_hg19_v1_chr11_+_12960793 AK075236	-175837	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	-440685	+	TSC_hg19_v1_chr11_+_13299288 NM_001030272 NM_001030273 NM_001178	162644	+	TSC_hg19_v1_chr11_+_13299331 AK315174	162684	+	BC041129 TSC_hg19_v1_chr11_+_13299351 AK291510	162710	+	NM_001080521|RASSF10|644943|Ras association (RalGDS/AF-6) domain family (N-terminal) member 10##AK075236|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)##NM_001030272|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001030273|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##NM_001178|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK315174|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##BC041129|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK291510|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like	0.169778	
chr15	20994812	20994937	reg1031856.p1	5.106	+	NM_001145004	-247761	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-283437	-	None	None	None	NM_207355 BC066981	77104	-	NM_207355 BC066981	1088264	-	BC136985 NM_001004719	1373603	+	NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2	0.481375	CTCF.p2:0:0.481
chr17	28194957	28195064	reg1028656.p1	5.106	+	TSC_hg19_v1_chr17_-_28088446 BC011636	-106552	-	BC028205 TSC_hg19_v1_chr17_-_27949878 AL833952	-245159	-	AK096431 NM_032854	-246618	-	AK302745 AK303060 NM_001145053 AK299608	61886	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	62123	-	NM_198529 BX648689 BC137519	73694	+	BC011636|SSH2|85464|slingshot homolog 2 (Drosophila)##BC028205|CORO6|84940|coronin 6##AL833952|CORO6|84940|coronin 6##AK096431|CORO6|84940|coronin 6##NM_032854|CORO6|84940|coronin 6##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5	0.010793	
chr18	33077918	33078044	reg1028036.p2	5.106	+	AK095502 AK300660 BC039404 NM_001098817 NM_194281	-56	-	BC130288 BC136314 AF492004 AF533251 AK055775 NM_145756	-120688	-	TSC_hg19_v1_chr18_-_32924421 AK291246 NM_006965	-153560	-	NM_020474 BC047746 U41514 AB529022 X85018	156598	+	NM_001201474 NM_001201475 NM_001201476 NM_031446 BC108730 TSC_hg19_v1_chr18_+_33552656 BC119765 BC119766 AK311536 AF277182 AF277189 BC025950	474686	+	TSC_hg19_v1_chr18_-_33647515 DQ892910 EU176720 AF419845 NM_018170 BC000225 AK314569	569446	-	AK095502|INO80C|125476|INO80 complex subunit C##AK300660|INO80C|125476|INO80 complex subunit C##BC039404|INO80C|125476|INO80 complex subunit C##NM_001098817|INO80C|125476|INO80 complex subunit C##NM_194281|INO80C|125476|INO80 complex subunit C##BC130288|ZNF396|252884|zinc finger protein 396##BC136314|ZNF396|252884|zinc finger protein 396##AF492004|ZNF396|252884|zinc finger protein 396##AF533251|ZNF396|252884|zinc finger protein 396##AK055775|ZNF396|252884|zinc finger protein 396##NM_145756|ZNF396|252884|zinc finger protein 396##AK291246|ZNF24|7572|zinc finger protein 24##NM_006965|ZNF24|7572|zinc finger protein 24##NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21##NM_031446|C18orf21|83608|chromosome 18 open reading frame 21##BC108730|C18orf21|83608|chromosome 18 open reading frame 21##BC119765|C18orf21|83608|chromosome 18 open reading frame 21##BC119766|C18orf21|83608|chromosome 18 open reading frame 21##AF277182|C18orf21|83608|chromosome 18 open reading frame 21##AF277189|C18orf21|83608|chromosome 18 open reading frame 21##BC025950|C18orf21|83608|chromosome 18 open reading frame 21##DQ892910|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##EU176720|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AF419845|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##NM_018170|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC000225|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK314569|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A	0.0	
chr20	3799133	3799244	reg1025505.p1	5.106	+	TSC_hg19_v1_chr20_+_3776956 S78187 Z68092 BC006395 M81934	-22183	+	AK092713 FR695900 FR695901 NM_004358 NM_021872 NM_021873 TSC_hg19_v1_chr20_+_3776429 BX647988 BC051711	-22755	+	TSC_hg19_v1_chr20_-_3767358 X05299 AB464478 AF002713 BC053847 NM_001810	-32053	-	TSC_hg19_v1_chr20_+_3801202 NM_001204446 NM_001204447 NM_018347 BC011985 AK002030 AK093332 BC043344	2010	+	TSC_hg19_v1_chr20_+_3827524 NM_001206491 NM_020746 AK296897 AB097003 AK123956 AK291785 BX649084 AK023799 AX775775 BC044952 AK130992	28308	+	AK021791 NM_024960 TSC_hg19_v1_chr20_+_3869569	70344	+	S78187|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##Z68092|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BC006395|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##M81934|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##AK092713|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##FR695900|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##FR695901|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_004358|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_021872|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_021873|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BX647988|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BC051711|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##X05299|CENPB|1059|centromere protein B, 80kDa##AF002713|CENPB|1059|centromere protein B, 80kDa##BC053847|CENPB|1059|centromere protein B, 80kDa##NM_001810|CENPB|1059|centromere protein B, 80kDa##NM_001204446|C20orf29|55317|chromosome 20 open reading frame 29##NM_001204447|C20orf29|55317|chromosome 20 open reading frame 29##NM_018347|C20orf29|55317|chromosome 20 open reading frame 29##BC011985|C20orf29|55317|chromosome 20 open reading frame 29##AK002030|C20orf29|55317|chromosome 20 open reading frame 29##AK093332|C20orf29|55317|chromosome 20 open reading frame 29##BC043344|C20orf29|55317|chromosome 20 open reading frame 29##NM_001206491|MAVS|57506|mitochondrial antiviral signaling protein##NM_020746|MAVS|57506|mitochondrial antiviral signaling protein##AK296897|MAVS|57506|mitochondrial antiviral signaling protein##AB097003|MAVS|57506|mitochondrial antiviral signaling protein##AK123956|MAVS|57506|mitochondrial antiviral signaling protein##AK291785|MAVS|57506|mitochondrial antiviral signaling protein##BX649084|MAVS|57506|mitochondrial antiviral signaling protein##AK023799|MAVS|57506|mitochondrial antiviral signaling protein##BC044952|MAVS|57506|mitochondrial antiviral signaling protein##AK130992|MAVS|57506|mitochondrial antiviral signaling protein##AK021791|PANK2|80025|pantothenate kinase 2##NM_024960|PANK2|80025|pantothenate kinase 2	0.870288	CTCF.p2:3:0.870
chr20	52309870	52310050	reg1028220.p2	5.106	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-99161	-	AF041259 NM_006526	-110325	-	AK302570 NM_001193421	-508139	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	377102	-	AK315220 NM_003657	377343	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	480560	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr2	103592618	103592729	reg1025320.p2	5.106	+	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	-214091	+	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	-239291	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	-239340	-	TSC_hg19_v1_chr2_-_105467912 AK096498	1875243	-	TSC_hg19_v1_chr2_+_105471877 NM_006236	1879225	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	2061841	+	CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182##AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##NM_006236|POU3F3|5455|POU class 3 homeobox 3##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9	0.158269	
chr5	17219026	17219149	reg1024471.p2	5.106	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-1247	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-1475	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-282702	-	AK295087 BC031051 NM_001167667 NM_004934	2769235	-	TSC_hg19_v1_chr5_+_21459621 AK290693	4240522	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	4240561	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.0	
chr9	140473395	140473512	reg1026398.p1	5.106	+	TSC_hg19_v1_chr9_-_140473377 AK310987 AK308998 AK075115 NM_138778	-81	-	CU675946 TSC_hg19_v1_chr9_-_140473350 AK307180 BC003123 BC016349 BC017335	-163	-	NM_032477 TSC_hg19_v1_chr9_+_140446353 BC040035 AY232291	-27094	+	BC012948 AJ298882 AX766496 TSC_hg19_v1_chr9_-_140484953 NM_138462	11479	-	TSC_hg19_v1_chr9_+_140500092 NM_152285	26621	+	TSC_hg19_v1_chr9_+_140500105 BC032346	26651	+	AK310987|WDR85|92715|WD repeat domain 85##AK308998|WDR85|92715|WD repeat domain 85##AK075115|WDR85|92715|WD repeat domain 85##NM_138778|WDR85|92715|WD repeat domain 85##AK307180|WDR85|92715|WD repeat domain 85##BC003123|WDR85|92715|WD repeat domain 85##BC016349|WDR85|92715|WD repeat domain 85##BC017335|WDR85|92715|WD repeat domain 85##NM_032477|MRPL41|64975|mitochondrial ribosomal protein L41##BC040035|MRPL41|64975|mitochondrial ribosomal protein L41##AY232291|MRPL41|64975|mitochondrial ribosomal protein L41##BC012948|ZMYND19|116225|zinc finger, MYND-type containing 19##AJ298882|ZMYND19|116225|zinc finger, MYND-type containing 19##AX766496|ZMYND19|116225|zinc finger, MYND-type containing 19##NM_138462|ZMYND19|116225|zinc finger, MYND-type containing 19##NM_152285|ARRDC1|92714|arrestin domain containing 1##BC032346|ARRDC1|92714|arrestin domain containing 1	0.04984	
chr10	114194883	114195034	reg1027654.p2	5.105	+	TSC_hg19_v1_chr10_+_114154539 AM262166 DQ893266 DQ896596	-40345	+	TSC_hg19_v1_chr10_+_114136043 AB033899	-58879	+	TSC_hg19_v1_chr10_+_114135984 AK223288 BC007985 AY358520	-58970	+	TSC_hg19_v1_chr10_-_114206706 BX647270 BC007213 BC017434 AF267740 AK223086 AK025605 NM_022494	11730	-	TSC_hg19_v1_chr10_+_114206756 AK095476 NM_145206 BC064614	11806	+	TSC_hg19_v1_chr10_+_114206991 BC017052 AK303646	12053	+	AM262166|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##DQ893266|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##DQ896596|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##AB033899|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##AK223288|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##BC007985|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##AY358520|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##BX647270|ZDHHC6|64429|zinc finger, DHHC-type containing 6##BC007213|ZDHHC6|64429|zinc finger, DHHC-type containing 6##BC017434|ZDHHC6|64429|zinc finger, DHHC-type containing 6##AF267740|ZDHHC6|64429|zinc finger, DHHC-type containing 6##AK223086|ZDHHC6|64429|zinc finger, DHHC-type containing 6##AK025605|ZDHHC6|64429|zinc finger, DHHC-type containing 6##NM_022494|ZDHHC6|64429|zinc finger, DHHC-type containing 6##NM_145206|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##BC017052|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##AK303646|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)	0.91143	CTCF.p2:21:0.911
chr10	86294077	86294174	reg1027075.p1	5.105	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-109430	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-162507	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-205731	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	1832138	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	1987369	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	1987405	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.899684	CTCF.p2:-3:0.900
chr10	88699446	88699546	reg1000220.p2	5.105	+	TSC_hg19_v1_chr10_+_88516526 NM_004329 BC028383 AK291764 Z22535	-183009	+	AK304760 TSC_hg19_v1_chr10_+_88428267 AK300692 AK297871 NM_001080116 AJ133766 BC010929 NM_001080114 NM_001080115 NM_001171611 NM_007078 AB014513 AF276807 AF276808 AF276809 AJ133767 AJ133768	-271141	+	TSC_hg19_v1_chr10_+_88428170 NM_001171610	-271310	+	TSC_hg19_v1_chr10_-_88717330 BC072456 AK304727 AK023527 AK293822 BC094744 BC064415 AK308401 NM_024756	17875	-	NM_003087 AK223367 AK311652 BC014098 AK312141 AF017256 AF411524 EU019993 AF010126 DQ892334 DQ892505 DQ895719 EU176715 AB464279 CR541788 CR541790	18874	+	NM_006829 TSC_hg19_v1_chr10_+_88728238 AK304688 AK312031 BC004471 D45370	28732	+	NM_004329|BMPR1A|657|bone morphogenetic protein receptor, type IA##BC028383|BMPR1A|657|bone morphogenetic protein receptor, type IA##AK291764|BMPR1A|657|bone morphogenetic protein receptor, type IA##Z22535|BMPR1A|657|bone morphogenetic protein receptor, type IA##AK304760|LDB3|11155|LIM domain binding 3##AK300692|LDB3|11155|LIM domain binding 3##AK297871|LDB3|11155|LIM domain binding 3##NM_001080116|LDB3|11155|LIM domain binding 3##AJ133766|LDB3|11155|LIM domain binding 3##BC010929|LDB3|11155|LIM domain binding 3##NM_001080114|LDB3|11155|LIM domain binding 3##NM_001080115|LDB3|11155|LIM domain binding 3##NM_001171611|LDB3|11155|LIM domain binding 3##NM_007078|LDB3|11155|LIM domain binding 3##AB014513|LDB3|11155|LIM domain binding 3##AF276807|LDB3|11155|LIM domain binding 3##AF276808|LDB3|11155|LIM domain binding 3##AF276809|LDB3|11155|LIM domain binding 3##AJ133767|LDB3|11155|LIM domain binding 3##AJ133768|LDB3|11155|LIM domain binding 3##NM_001171610|LDB3|11155|LIM domain binding 3##BC072456|MMRN2|79812|multimerin 2##AK304727|MMRN2|79812|multimerin 2##AK023527|MMRN2|79812|multimerin 2##AK293822|MMRN2|79812|multimerin 2##BC094744|MMRN2|79812|multimerin 2##BC064415|MMRN2|79812|multimerin 2##AK308401|MMRN2|79812|multimerin 2##NM_024756|MMRN2|79812|multimerin 2##NM_003087|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK223367|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##BC014098|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK312141|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF017256|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF411524|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU019993|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF010126|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892334|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892505|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ895719|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU176715|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541788|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541790|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##NM_006829|C10orf116|10974|chromosome 10 open reading frame 116##AK312031|C10orf116|10974|chromosome 10 open reading frame 116##BC004471|C10orf116|10974|chromosome 10 open reading frame 116##D45370|C10orf116|10974|chromosome 10 open reading frame 116	0.0	
chr11	45792903	45793008	reg1017879.p1	5.105	+	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	-105771	-	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	-485205	-	AF275818 NM_020229	-677392	+	NM_001145265 NM_001145266	32667	+	TSC_hg19_v1_chr11_+_45825944 AK225428 AK002182 AK091245	32959	+	AK074929 NM_018389 AK027394 AK027747 AK130181 AF326199	33736	+	AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1##AK225428|SLC35C1|55343|solute carrier family 35, member C1##AK002182|SLC35C1|55343|solute carrier family 35, member C1##AK091245|SLC35C1|55343|solute carrier family 35, member C1##AK074929|SLC35C1|55343|solute carrier family 35, member C1##NM_018389|SLC35C1|55343|solute carrier family 35, member C1##AK027394|SLC35C1|55343|solute carrier family 35, member C1##AK027747|SLC35C1|55343|solute carrier family 35, member C1##AF326199|SLC35C1|55343|solute carrier family 35, member C1	0.359009	CTCF.p2:0:0.359
chr2	113539800	113539973	reg1026625.p1	5.105	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	-17664	-	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	-136366	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-197697	+	NM_000575 BC035169	3086	-	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	54458	-	AF167368 AF200496 NM_014439 NM_173202 NM_173203 NM_173204 BC020637 AB451333 AB451478 AB590279 AF251119 AF251120 AY071840 AY071841 CU676594 DQ891388	130682	+	AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta##AF167368|IL37|27178|interleukin 37##AF200496|IL37|27178|interleukin 37##NM_014439|IL37|27178|interleukin 37##NM_173202|IL37|27178|interleukin 37##NM_173203|IL37|27178|interleukin 37##NM_173204|IL37|27178|interleukin 37##BC020637|IL37|27178|interleukin 37##AB451333|IL37|27178|interleukin 37##AB451478|IL37|27178|interleukin 37##AF251119|IL37|27178|interleukin 37##AF251120|IL37|27178|interleukin 37##AY071840|IL37|27178|interleukin 37##AY071841|IL37|27178|interleukin 37##DQ891388|IL37|27178|interleukin 37	0.0	
chr3	181966264	181966397	reg1029296.p1	5.105	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-536192	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-536617	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-548938	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	544957	+	AK296750 TSC_hg19_v1_chr3_+_182511291	544965	+	TSC_hg19_v1_chr3_+_182511375 AF156548	545059	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.955856	CTCF.p2:-2:0.956
chr6	2952876	2953019	reg1018103.p1	5.105	+	TSC_hg19_v1_chr6_-_2903544 BC002538 AB060690 L40378 AK314842 NM_004155	-49439	-	TSC_hg19_v1_chr6_-_2842202 AK304641 AK309765	-110750	-	TSC_hg19_v1_chr6_-_2842095 BC009015 NM_030666 M93056 AK298044 AK312973 AK223370 AK291327	-110865	-	AK098566 TSC_hg19_v1_chr6_-_2971511	18467	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	18864	-	TSC_hg19_v1_chr6_-_2971981 AK314578	19102	-	BC002538|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AB060690|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##L40378|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK314842|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##NM_004155|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK304641|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK309765|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK098566|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314578|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6	0.905644	CTCF.p2:-15:0.763
chrX	147214763	147214920	reg1027899.p1	5.105	+	BC034320 NM_152578 AY211917 AK098602	-151986	+	TSC_hg19_v1_chrX_+_146993685 CU691632	-221148	+	BC038998 TSC_hg19_v1_chrX_+_146993559	-221290	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	367347	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	585771	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	1371933	-	BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##BC038998|FMR1|2332|fragile X mental retardation 1##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase	0.777212	CTCF.p2:-4:0.777
chr12	30042792	30042904	reg1022992.p1	5.104	+	BC042083 NM_175861	-105157	-	TSC_hg19_v1_chr12_-_29936844 GQ865601 NM_001193451	-106078	-	NM_183378	-392230	-	AK302260 NM_001190995	787312	-	U77494 TSC_hg19_v1_chr12_-_30848794	805922	-	TSC_hg19_v1_chr12_-_30848807 NM_006390	806018	-	BC042083|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_175861|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##GQ865601|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_001193451|TMTC1|83857|transmembrane and tetratricopeptide repeat containing 1##NM_183378|OVCH1|341350|ovochymase 1##AK302260|IPO8|10526|importin 8##NM_001190995|IPO8|10526|importin 8##U77494|IPO8|10526|importin 8##NM_006390|IPO8|10526|importin 8	0.734074	CTCF.p2:5:0.734
chr12	81231264	81231428	reg1033107.p1	5.104	+	TSC_hg19_v1_chr12_+_81110690 NM_005593 BC069373 X14894 AB528948 BT019399	-120581	+	NM_002469 AK313287 X52011 BC017834 AB587443 CU676084 DQ893248 DQ896577 CR407641 CR541763	-129894	+	NM_001145026	-393221	+	TSC_hg19_v1_chr12_-_81331470 AK309256	100121	-	TSC_hg19_v1_chr12_-_81331487 AB528898 CR407680 BC099921 AK315321 BC046926 BC062332 BC118609 BC122561 AF087693 AF173081 NM_004664	100244	-	TSC_hg19_v1_chr12_+_81471857 BC009317 BC015769 NM_024560 AK025616 AX764482	240512	+	NM_005593|MYF5|4617|myogenic factor 5##BC069373|MYF5|4617|myogenic factor 5##X14894|MYF5|4617|myogenic factor 5##BT019399|MYF5|4617|myogenic factor 5##NM_002469|MYF6|4618|myogenic factor 6 (herculin)##AK313287|MYF6|4618|myogenic factor 6 (herculin)##X52011|MYF6|4618|myogenic factor 6 (herculin)##BC017834|MYF6|4618|myogenic factor 6 (herculin)##DQ893248|MYF6|4618|myogenic factor 6 (herculin)##DQ896577|MYF6|4618|myogenic factor 6 (herculin)##CR407641|MYF6|4618|myogenic factor 6 (herculin)##CR541763|MYF6|4618|myogenic factor 6 (herculin)##NM_001145026|PTPRQ|374462|protein tyrosine phosphatase, receptor type, Q##AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)##CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)##BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)##AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)##BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)##BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)##BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)##BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)##AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)##AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)##NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)##BC009317|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##BC015769|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##NM_024560|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AK025616|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AX764482|ACSS3|79611|acyl-CoA synthetase short-chain family member 3	0.265834	CTCF.p2:-13:0.266
chr13	42790393	42790517	reg1027300.p2	5.104	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	-78245	+	NM_152910 NM_178009 AB078967 AB078968	-167590	+	AK289546 NM_001204504	-176284	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	55830	+	BC040889 NM_033012	346416	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	357879	+	AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##AK289546|DGKH|160851|diacylglycerol kinase, eta##NM_001204504|DGKH|160851|diacylglycerol kinase, eta##AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11	0.913368	CTCF.p2:-5:0.913
chr20	45887769	45887938	reg1027514.p2	5.104	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	-364301	+	TSC_hg19_v1_chr20_+_45523505 BC008803	-364345	+	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	-364571	+	TSC_hg19_v1_chr20_-_45927496 BC030721	39716	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	88794	-	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	97635	-	AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8	0.0	
chr20	50416837	50416937	reg1027416.p2	5.104	+	TSC_hg19_v1_chr20_-_50384925 NM_006045	-31959	-	TSC_hg19_v1_chr20_-_50384875 AB385363 AB014511 AK299064	-32009	-	BC110591 BC110592 BC063701 TSC_hg19_v1_chr20_-_50314160	-102809	-	AY170621 AY170622 AY172738 BC111714 AK001666 NM_020436	2109	-	BT009760 AB527686 BC021087 AK001744 TSC_hg19_v1_chr20_-_50808313 AK090547 BC031524 AK001596 AK222712	391368	-	BC012759 BC041622 NM_018197 NM_022088 NM_199426 NM_199427	391636	-	NM_006045|ATP9A|10079|ATPase, class II, type 9A##AB014511|ATP9A|10079|ATPase, class II, type 9A##AK299064|ATP9A|10079|ATPase, class II, type 9A##BC110591|ATP9A|10079|ATPase, class II, type 9A##BC110592|ATP9A|10079|ATPase, class II, type 9A##BC063701|ATP9A|10079|ATPase, class II, type 9A##AY170621|SALL4|57167|sal-like 4 (Drosophila)##AY170622|SALL4|57167|sal-like 4 (Drosophila)##AY172738|SALL4|57167|sal-like 4 (Drosophila)##BC111714|SALL4|57167|sal-like 4 (Drosophila)##AK001666|SALL4|57167|sal-like 4 (Drosophila)##NM_020436|SALL4|57167|sal-like 4 (Drosophila)##BT009760|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC021087|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001744|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK090547|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC031524|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001596|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK222712|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC012759|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC041622|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_018197|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_022088|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199426|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199427|ZFP64|55734|zinc finger protein 64 homolog (mouse)	1.028804	CTCF.p2:-15:0.996
chr6	13625202	13625323	reg1029941.p1	5.104	+	TSC_hg19_v1_chr6_+_13615570 AF172066 NM_016167 BC062683 AK075301 BC023517 CU692792	-9662	+	BC064478 TSC_hg19_v1_chr6_-_13615415	-9859	-	TSC_hg19_v1_chr6_+_13574830 NM_001193267 NM_001242827 NM_031244 BX538030 AK302467 AK000355 AK294162 AJ420496 NM_012241 BC000126 AF083110	-50419	+	AB008515 TSC_hg19_v1_chr6_-_13711498	86229	-	TSC_hg19_v1_chr6_-_13711730 AB055311 NM_005493	86473	-	BC052781 TSC_hg19_v1_chr6_-_13711955	86712	-	AF172066|NOL7|51406|nucleolar protein 7, 27kDa##NM_016167|NOL7|51406|nucleolar protein 7, 27kDa##BC062683|NOL7|51406|nucleolar protein 7, 27kDa##AK075301|NOL7|51406|nucleolar protein 7, 27kDa##BC023517|NOL7|51406|nucleolar protein 7, 27kDa##NM_001193267|SIRT5|23408|sirtuin 5##NM_001242827|SIRT5|23408|sirtuin 5##NM_031244|SIRT5|23408|sirtuin 5##BX538030|SIRT5|23408|sirtuin 5##AK302467|SIRT5|23408|sirtuin 5##AK000355|SIRT5|23408|sirtuin 5##AK294162|SIRT5|23408|sirtuin 5##AJ420496|SIRT5|23408|sirtuin 5##NM_012241|SIRT5|23408|sirtuin 5##BC000126|SIRT5|23408|sirtuin 5##AF083110|SIRT5|23408|sirtuin 5##AB008515|RANBP9|10048|RAN binding protein 9##AB055311|RANBP9|10048|RAN binding protein 9##NM_005493|RANBP9|10048|RAN binding protein 9##BC052781|RANBP9|10048|RAN binding protein 9	0.975353	CTCF.p2:6:0.975
chr10	73403817	73403914	reg1023509.p1	5.103	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	-247127	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-324819	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-324840	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	75727	-	AK074172 NM_001168390	93715	-	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	129441	-	BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54	0.072904	
chr11	133389719	133389893	reg1025862.p1	5.103	+	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-576201	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-576792	-	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1608467	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	12508	-	AF521713 AK098717 NM_174927 BC058039	325575	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	437076	-	AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B	0.0	
chr11	76224297	76224433	reg1025530.p2	5.103	+	TSC_hg19_v1_chr11_+_76156061 AK304043 BC033404 NM_020193 AK309621 BC021688 AK125114	-68262	+	TSC_hg19_v1_chr11_-_76155721 AK054718	-68640	-	TSC_hg19_v1_chr11_+_76092383 AK125821 BC040665 AK095089	-131942	+	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	156603	-	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	157444	-	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	269912	+	AK304043|C11orf30|56946|chromosome 11 open reading frame 30##BC033404|C11orf30|56946|chromosome 11 open reading frame 30##NM_020193|C11orf30|56946|chromosome 11 open reading frame 30##AK309621|C11orf30|56946|chromosome 11 open reading frame 30##BC021688|C11orf30|56946|chromosome 11 open reading frame 30##AK125114|C11orf30|56946|chromosome 11 open reading frame 30##AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)	0.14015	
chr15	65187688	65187796	reg1028166.p1	5.103	+	AK311036 NM_001195059 NM_025201 TSC_hg19_v1_chr15_+_65134113 AK096203 BC008744 AF494534	-53635	+	BC137503 BC137504 TSC_hg19_v1_chr15_-_65117814 BC018978 AK026345 EU084033 NM_025049 AB185926 AB185927	-69907	-	BC131612 BC148208 AY369207 NM_194272 TSC_hg19_v1_chr15_-_65067789 AK127873	-119996	-	TSC_hg19_v1_chr15_+_65204100 AK098736 NM_182703 AK075298 BC110610 AK307698	16347	+	TSC_hg19_v1_chr15_-_65281780 AF212231 NM_001127889	94067	-	TSC_hg19_v1_chr15_-_65282170 AK172849 AK225527 AK312943 BC000244	94392	-	NM_001195059|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##NM_025201|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK096203|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC008744|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AF494534|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC137503|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC137504|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC018978|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AK026345|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##EU084033|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_025049|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185926|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185927|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC131612|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC148208|RBPMS2|348093|RNA binding protein with multiple splicing 2##AY369207|RBPMS2|348093|RNA binding protein with multiple splicing 2##NM_194272|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK127873|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK098736|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##NM_182703|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK075298|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##BC110610|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK307698|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	0.0	
chr17	4871150	4871266	reg1026622.p2	5.103	+	BC007819 BC011934 TSC_hg19_v1_chr17_-_4871113 AF047437 AK312174 NM_004890	-97	-	NM_001193503 NM_001976 NM_053013 TSC_hg19_v1_chr17_+_4854406 AK300662 AK300673 AK300709 AK309864 BC017249	-16804	+	TSC_hg19_v1_chr17_-_4851828 BC057828	-19364	-	AL831849 NM_001171167 NM_001171168 TSC_hg19_v1_chr17_-_4890732	19492	-	AB020716 BC167148 BC167149 BC167151 BC167160 EU832136 EU832229 TSC_hg19_v1_chr17_-_4890947 AK302528 AL833974 BC142695 NM_001171166 NM_015099	19744	-	AY601906 AY601907 NM_001167985 NM_001167986 NM_001167987 NM_213726	29696	-	BC007819|SPAG7|9552|sperm associated antigen 7##BC011934|SPAG7|9552|sperm associated antigen 7##AF047437|SPAG7|9552|sperm associated antigen 7##AK312174|SPAG7|9552|sperm associated antigen 7##NM_004890|SPAG7|9552|sperm associated antigen 7##NM_001193503|ENO3|2027|enolase 3 (beta, muscle)##NM_001976|ENO3|2027|enolase 3 (beta, muscle)##NM_053013|ENO3|2027|enolase 3 (beta, muscle)##AK300662|ENO3|2027|enolase 3 (beta, muscle)##AK300673|ENO3|2027|enolase 3 (beta, muscle)##AK300709|ENO3|2027|enolase 3 (beta, muscle)##AK309864|ENO3|2027|enolase 3 (beta, muscle)##BC017249|ENO3|2027|enolase 3 (beta, muscle)##BC057828|PFN1|5216|profilin 1##AL831849|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171167|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171168|CAMTA2|23125|calmodulin binding transcription activator 2##AB020716|CAMTA2|23125|calmodulin binding transcription activator 2##BC167148|CAMTA2|23125|calmodulin binding transcription activator 2##BC167149|CAMTA2|23125|calmodulin binding transcription activator 2##BC167151|CAMTA2|23125|calmodulin binding transcription activator 2##BC167160|CAMTA2|23125|calmodulin binding transcription activator 2##EU832136|CAMTA2|23125|calmodulin binding transcription activator 2##EU832229|CAMTA2|23125|calmodulin binding transcription activator 2##AK302528|CAMTA2|23125|calmodulin binding transcription activator 2##AL833974|CAMTA2|23125|calmodulin binding transcription activator 2##BC142695|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171166|CAMTA2|23125|calmodulin binding transcription activator 2##NM_015099|CAMTA2|23125|calmodulin binding transcription activator 2##AY601906|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##AY601907|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167985|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167986|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167987|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_213726|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1	0.0	
chr20	35899080	35899230	reg1005603.p3	5.103	+	X00094 BC098109 BC098161 BC099727 NM_001184731 NM_021081	-13868	-	AB527120 AM392522 AM392819 TSC_hg19_v1_chr20_-_35807952 BC030006 BC057767 NM_152503 NM_213631 NM_213632 AK093432 AX748122	-91218	-	TSC_hg19_v1_chr20_+_35807749 AK308683 CR456899 DQ892347 DQ895552	-91402	+	TSC_hg19_v1_chr20_+_35918057 AK292971 NM_001003897 NM_022077	18880	+	TSC_hg19_v1_chr20_+_35918065 BC016822 BC014672	18930	+	TSC_hg19_v1_chr20_+_35973086 AF272982 NM_005417	73938	+	X00094|GHRH|2691|growth hormone releasing hormone##BC098109|GHRH|2691|growth hormone releasing hormone##BC098161|GHRH|2691|growth hormone releasing hormone##BC099727|GHRH|2691|growth hormone releasing hormone##NM_001184731|GHRH|2691|growth hormone releasing hormone##NM_021081|GHRH|2691|growth hormone releasing hormone##AM392522|C20orf132|140699|chromosome 20 open reading frame 132##AM392819|C20orf132|140699|chromosome 20 open reading frame 132##BC030006|C20orf132|140699|chromosome 20 open reading frame 132##BC057767|C20orf132|140699|chromosome 20 open reading frame 132##NM_152503|C20orf132|140699|chromosome 20 open reading frame 132##NM_213631|C20orf132|140699|chromosome 20 open reading frame 132##NM_213632|C20orf132|140699|chromosome 20 open reading frame 132##AK093432|C20orf132|140699|chromosome 20 open reading frame 132##AK308683|RPN2|6185|ribophorin II##CR456899|RPN2|6185|ribophorin II##DQ892347|RPN2|6185|ribophorin II##DQ895552|RPN2|6185|ribophorin II##AK292971|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_001003897|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_022077|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC016822|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC014672|MANBAL|63905|mannosidase, beta A, lysosomal-like##AF272982|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005417|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	0.0	
chr5	55376541	55376722	reg1024239.p1	5.103	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-85868	-	NM_001242636 NM_001242639	-227482	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-229362	+	AK123389 NM_024669	152554	-	NM_005921	734268	+	TSC_hg19_v1_chr5_+_56111375 AK307828	734733	+	BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr9	102130610	102130772	reg1026606.p1	5.103	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-146104	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-146448	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-146474	-	TSC_hg19_v1_chr9_-_102582187 AK057451	451474	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	453466	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	538236	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.0	
chr1	15241920	15242101	reg1026260.p1	5.102	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	-316816	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-1166069	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-1166087	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	8709	+	AY505121 NM_001018001	14285	+	AY505122 NM_001017999	30404	+	AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein	0.336661	CTCF.p2:25:0.337
chr1	178269164	178269322	reg1025617.p1	5.102	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-205602	+	TSC_hg19_v1_chr1_+_178063306 BC063442	-205939	+	TSC_hg19_v1_chr1_+_178063275 BC030292	-205968	+	AF047711 NM_004841 AK290308	41391	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	213023	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	425130	+	BC110611|RASAL2|9462|RAS protein activator like 2##BC063442|RASAL2|9462|RAS protein activator like 2##BC030292|RASAL2|9462|RAS protein activator like 2##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2	1.073771	CTCF.p2:-7:0.999
chr18	33991763	33991874	reg1028882.p1	5.102	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	-114104	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-224342	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-281930	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	416945	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	417076	-	AB073382 TSC_hg19_v1_chr18_-_34408948	417134	-	AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.014969	
chr9	35481537	35481648	reg1026457.p1	5.102	+	TSC_hg19_v1_chr9_+_35162109 BC111781 BC111800	-319483	+	TSC_hg19_v1_chr9_+_35161986 NM_006377 AB209998 AK296836 AF020202	-319590	+	TSC_hg19_v1_chr9_-_35115860 AK022837 AK021622 BC004406 NM_025182 AK307682	-365715	-	TSC_hg19_v1_chr9_+_35489994 NM_014806	8405	+	TSC_hg19_v1_chr9_+_35490107 BC150211 AB002373 BC042915	8492	+	NM_001135999	57036	+	BC111781|UNC13B|10497|unc-13 homolog B (C. elegans)##BC111800|UNC13B|10497|unc-13 homolog B (C. elegans)##NM_006377|UNC13B|10497|unc-13 homolog B (C. elegans)##AB209998|UNC13B|10497|unc-13 homolog B (C. elegans)##AK296836|UNC13B|10497|unc-13 homolog B (C. elegans)##AF020202|UNC13B|10497|unc-13 homolog B (C. elegans)##AK022837|FAM214B|80256|family with sequence similarity 214, member B##AK021622|FAM214B|80256|family with sequence similarity 214, member B##BC004406|FAM214B|80256|family with sequence similarity 214, member B##NM_025182|FAM214B|80256|family with sequence similarity 214, member B##AK307682|FAM214B|80256|family with sequence similarity 214, member B##NM_014806|RUSC2|9853|RUN and SH3 domain containing 2##BC150211|RUSC2|9853|RUN and SH3 domain containing 2##AB002373|RUSC2|9853|RUN and SH3 domain containing 2##NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2	0.0	
chr9	90299625	90299794	reg1028184.p2	5.102	+	TSC_hg19_v1_chr9_+_90112781 NM_004938 X76104 BC003614 AK295119	-186841	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	-187123	+	AK127445 NM_001001709 BC132741 BC136791 HQ258059	-536108	+	NM_001912 NM_145918 TSC_hg19_v1_chr9_+_90341001	41284	+	AK075100 TSC_hg19_v1_chr9_+_90341022 BX648848	41313	+	AL832167 BX647102 BX647434 TSC_hg19_v1_chr9_+_90341033 BX537395 BX647101 BX647413 BX647435 BX648849 BX649140 X12451 AF304301 BC142983 AF217997	41331	+	NM_004938|DAPK1|1612|death-associated protein kinase 1##X76104|DAPK1|1612|death-associated protein kinase 1##AK295119|DAPK1|1612|death-associated protein kinase 1##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##NM_001912|CTSL1|1514|cathepsin L1##NM_145918|CTSL1|1514|cathepsin L1##AK075100|CTSL1|1514|cathepsin L1##BX648848|CTSL1|1514|cathepsin L1##AL832167|CTSL1|1514|cathepsin L1##BX647102|CTSL1|1514|cathepsin L1##BX647434|CTSL1|1514|cathepsin L1##BX537395|CTSL1|1514|cathepsin L1##BX647101|CTSL1|1514|cathepsin L1##BX647413|CTSL1|1514|cathepsin L1##BX647435|CTSL1|1514|cathepsin L1##BX648849|CTSL1|1514|cathepsin L1##BX649140|CTSL1|1514|cathepsin L1##X12451|CTSL1|1514|cathepsin L1##AF304301|CTSL1|1514|cathepsin L1##BC142983|CTSL1|1514|cathepsin L1##AF217997|CTSL1|1514|cathepsin L1	0.991689	CTCF.p2:-14:0.992
chr16	11194133	11194265	reg1026618.p1	5.101	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-155756	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-157964	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-158033	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	155851	-	X63758 BC096135 BC096136 BC096137 NM_005425	168939	-	NM_021247	173252	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.022243	
chr2	34963861	34963983	reg1026570.p1	5.101	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-1139577	-	AB020653 NM_015376	-1224981	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-1262226	+	TSC_hg19_v1_chr2_+_36582920 AY358371	1619040	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	1619480	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	1861360	-	BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	0.485518	CTCF.p2:22:0.486
chr7	157066144	157066324	reg1003779.p1	5.101	+	TSC_hg19_v1_chr7_+_157023934 AK098447	-42228	+	D13635 TSC_hg19_v1_chr7_+_156931668 BC014029	-134551	+	TSC_hg19_v1_chr7_+_156931631 NM_014671	-134588	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	63477	+	TSC_hg19_v1_chr7_+_157647233 BC034557	581040	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	1314219	-	D13635|UBE3C|9690|ubiquitin protein ligase E3C##BC014029|UBE3C|9690|ubiquitin protein ligase E3C##NM_014671|UBE3C|9690|ubiquitin protein ligase E3C##AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC034557|LOC100506585|100506585|uncharacterized LOC100506585##DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	0.0	
chr7	33147059	33147213	reg1015774.p1	5.101	+	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-44814	-	BC015856 NM_001166118 NM_016489	-66617	-	TSC_hg19_v1_chr7_+_32997051 NM_007270 AK075331 AK128597 AK300328 AK293954 AK294266 BC101723 BC112053 AF089745	-149984	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	1841	-	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	21945	+	AK289963 NM_133468 AK096150 BC060868	798006	+	AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##BC015856|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001166118|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_016489|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_007270|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK075331|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK128597|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK300328|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK293954|FKBP9|11328|FK506 binding protein 9, 63 kDa##AK294266|FKBP9|11328|FK506 binding protein 9, 63 kDa##BC101723|FKBP9|11328|FK506 binding protein 9, 63 kDa##BC112053|FKBP9|11328|FK506 binding protein 9, 63 kDa##AF089745|FKBP9|11328|FK506 binding protein 9, 63 kDa##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator	0.0	
chr9	132145965	132146089	reg1029719.p1	5.101	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-62732	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-205487	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-205520	-	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	105327	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	105414	+	BC112353 AK093122 AX747938 NM_199350	237010	-	AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50	0.033648	
chrX	118887803	118887947	reg1023141.p1	5.101	+	AY034177 AF403058 AF403059 AF403060 AF403061 AF403062 AY679521 NM_015129 NM_145799 NM_145800 NM_145802 TSC_hg19_v1_chrX_-_118827360 AK290977	-60524	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	-60696	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	-60743	-	TSC_hg19_v1_chrX_+_118892553 NM_001105576	4706	+	U57846 AK098280 BC001019 D79205 TSC_hg19_v1_chrX_-_118925592 BC070205 D28397 NM_001000	37709	-	TSC_hg19_v1_chrX_-_118986969 AF318576 AK093728 AX748280 BC121017 BC121018 AY013251 BC008494 NM_023010 NM_080632	99076	-	AY034177|SEPT6|23157|septin 6##AF403058|SEPT6|23157|septin 6##AF403059|SEPT6|23157|septin 6##AF403060|SEPT6|23157|septin 6##AF403061|SEPT6|23157|septin 6##AF403062|SEPT6|23157|septin 6##AY679521|SEPT6|23157|septin 6##NM_015129|SEPT6|23157|septin 6##NM_145799|SEPT6|23157|septin 6##NM_145800|SEPT6|23157|septin 6##NM_145802|SEPT6|23157|septin 6##AK290977|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##NM_001105576|ANKRD58|347454|ankyrin repeat domain 58##U57846|RPL39|6170|ribosomal protein L39##BC001019|RPL39|6170|ribosomal protein L39##D79205|RPL39|6170|ribosomal protein L39##BC070205|RPL39|6170|ribosomal protein L39##D28397|RPL39|6170|ribosomal protein L39##NM_001000|RPL39|6170|ribosomal protein L39##AF318576|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##AK093728|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC121017|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC121018|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##AY013251|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC008494|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##NM_023010|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##NM_080632|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)	0.149874	
chr10	55757863	55757976	reg1028145.p2	5.100	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-1226493	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-1683804	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-2298572	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	803079	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	1600855	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	2363095	-	AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor	0.97701	CTCF.p2:-5:0.977
chr11	130895112	130895214	reg1025385.p1	5.100	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-108775	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-108818	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-576501	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	345306	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	885461	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	886176	+	NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin	0.838567	CTCF.p2:-47:0.839
chr11	44131884	44132005	reg1026151.p1	5.100	+	NM_000401 BX648142	-14185	+	BC068545 TSC_hg19_v1_chr11_+_44117272 U72263 BC013050	-14673	+	NM_001178083 NM_207122 U62740 TSC_hg19_v1_chr11_+_44117224 AK312375 BC010058 AK296713	-14770	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	199732	-	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	455221	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	455283	+	NM_000401|EXT2|2132|exostosin 2##BX648142|EXT2|2132|exostosin 2##BC068545|EXT2|2132|exostosin 2##U72263|EXT2|2132|exostosin 2##BC013050|EXT2|2132|exostosin 2##NM_001178083|EXT2|2132|exostosin 2##NM_207122|EXT2|2132|exostosin 2##U62740|EXT2|2132|exostosin 2##AK312375|EXT2|2132|exostosin 2##BC010058|EXT2|2132|exostosin 2##AK296713|EXT2|2132|exostosin 2##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule	0.274475	CTCF.p2:0:0.274
chr1	28474627	28474789	reg1027753.p1	5.100	+	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-59584	-	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-188190	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-213147	+	NM_000952 NM_001164723	28746	-	S52624 AK292053 NM_001164721 NM_001164722	45704	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	84823	-	BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8	0.63227	CTCF.p2:91:0.632
chr14	98693728	98693908	reg1025106.p1	5.100	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-1430103	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-1725034	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-1725072	+	AK098639 NM_182560	484131	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	1043799	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	1044072	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.0	
chr3	193855549	193855656	reg1014274.p2	5.100	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	-1647	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	-1669	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-544437	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	216472	-	BC101064 BC101065 TSC_hg19_v1_chr3_-_194090471 AK125112 NM_001135057 NM_130830	234865	-	NM_004488	264392	-	AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2##BC101064|LRRC15|131578|leucine rich repeat containing 15##BC101065|LRRC15|131578|leucine rich repeat containing 15##AK125112|LRRC15|131578|leucine rich repeat containing 15##NM_001135057|LRRC15|131578|leucine rich repeat containing 15##NM_130830|LRRC15|131578|leucine rich repeat containing 15##NM_004488|GP5|2814|glycoprotein V (platelet)	0.0	
chr7	7635255	7635377	reg1027419.p1	5.100	+	TSC_hg19_v1_chr7_+_7606667 AK294561	-28630	+	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	-28728	+	BC136892 BC144431 AJ890451 NM_001037763	-59862	-	BT007320 AB464142 TSC_hg19_v1_chr7_-_7680067 L07493 BC005264 AK311842	44771	-	TSC_hg19_v1_chr7_+_7680382 AK295253	45057	+	BC009868 NM_002947	122921	-	AK294561|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##BT007320|RPA3|6119|replication protein A3, 14kDa##L07493|RPA3|6119|replication protein A3, 14kDa##BC005264|RPA3|6119|replication protein A3, 14kDa##AK311842|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa	0.030587	
chr8	65776458	65776597	reg1028647.p2	5.100	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	-65248	-	TSC_hg19_v1_chr8_+_65493611 AK091333	-282863	+	NM_152414 AK293979	-283669	+	TSC_hg19_v1_chr8_-_66546394 AK001373	769868	-	TSC_hg19_v1_chr8_-_66546404 AK304463	769879	-	TSC_hg19_v1_chr8_-_66546413 BC011607 BC018846 NM_018120	769905	-	BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK001373|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1##BC011607|ARMC1|55156|armadillo repeat containing 1##BC018846|ARMC1|55156|armadillo repeat containing 1##NM_018120|ARMC1|55156|armadillo repeat containing 1	0.0	
chrX	122412024	122412132	reg1027652.p1	5.100	+	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	-93838	+	TSC_hg19_v1_chrX_+_120181464 BC050732 NM_012084 AK313356	-2230638	+	BC029540 NM_001080141 NM_001080146	-2292441	-	TSC_hg19_v1_chrX_-_122866885 AK001758	454805	-	TSC_hg19_v1_chrX_-_122866897 NM_001081550	454819	-	TSC_hg19_v1_chrX_+_122993844 AK313883 NM_001204401 NM_001167 AK309704 U32974 BC032729	581864	+	NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC050732|GLUD2|2747|glutamate dehydrogenase 2##NM_012084|GLUD2|2747|glutamate dehydrogenase 2##AK313356|GLUD2|2747|glutamate dehydrogenase 2##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##AK001758|THOC2|57187|THO complex 2##NM_001081550|THOC2|57187|THO complex 2##AK313883|XIAP|331|X-linked inhibitor of apoptosis##NM_001204401|XIAP|331|X-linked inhibitor of apoptosis##NM_001167|XIAP|331|X-linked inhibitor of apoptosis##AK309704|XIAP|331|X-linked inhibitor of apoptosis##U32974|XIAP|331|X-linked inhibitor of apoptosis##BC032729|XIAP|331|X-linked inhibitor of apoptosis	0.935484	CTCF.p2:-1:0.935
chr11	1212839	1213020	reg1025384.p1	5.099	+	TSC_hg19_v1_chr11_+_1151579 AF015521 AJ298317 AF043909	-61343	+	TSC_hg19_v1_chr11_+_1074873 L21998 NM_002457	-138057	+	AY458429 AY312160 NM_005961 TSC_hg19_v1_chr11_-_1036715	-176243	-	TSC_hg19_v1_chr11_+_1213469 Z48314	545	+	TSC_hg19_v1_chr11_+_1244295 NM_002458 AK310939	31367	+	TSC_hg19_v1_chr11_+_1244340 AF086604	31407	+	AF015521|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AJ298317|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AF043909|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##L21998|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##NM_002457|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##AY458429|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AY312160|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##NM_005961|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##Z48314|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##NM_002458|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##AK310939|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##AF086604|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming	0.0	
chr16	68794867	68795048	reg1024109.p2	5.099	+	TSC_hg19_v1_chr16_+_68771304 Z18923	-23646	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	-23712	+	BC144283 TSC_hg19_v1_chr16_+_68771216 AK290012 Z13009	-23738	+	TSC_hg19_v1_chr16_+_68877504 BC092500 AB051533 NM_024562 AB463318	82548	+	AK291400 NM_001199280	344509	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	345183	+	Z18923|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC144283|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK290012|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##Z13009|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC092500|TMCO7|79613|transmembrane and coiled-coil domains 7##AB051533|TMCO7|79613|transmembrane and coiled-coil domains 7##NM_024562|TMCO7|79613|transmembrane and coiled-coil domains 7##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3	0.0	
chr2	88650579	88650699	reg1024530.p1	5.099	+	NM_018271 BC050699 BC035315 AK001778	-177883	+	NM_001244676 NM_001244678 AK289486 AK315831 BC064423	-180775	+	CR542090 AB527938 M10617 BC032801 M10050 TSC_hg19_v1_chr2_-_88427582 BC022287 NM_001443	-223047	-	NM_001135649	101413	-	AK058098 NM_152670 BC029522	173545	+	AF110146 BC126354 BC126356 AK128659 TSC_hg19_v1_chr2_-_88926983 AK315287 AF193339 NM_004836	276339	-	NM_018271|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC050699|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC035315|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK001778|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001244676|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##NM_001244678|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK289486|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##AK315831|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##BC064423|THNSL2|55258|threonine synthase-like 2 (S. cerevisiae)##CR542090|FABP1|2168|fatty acid binding protein 1, liver##M10617|FABP1|2168|fatty acid binding protein 1, liver##BC032801|FABP1|2168|fatty acid binding protein 1, liver##M10050|FABP1|2168|fatty acid binding protein 1, liver##BC022287|FABP1|2168|fatty acid binding protein 1, liver##NM_001443|FABP1|2168|fatty acid binding protein 1, liver##NM_001135649|FOXI3|344167|forkhead box I3##AK058098|C2orf51|200523|chromosome 2 open reading frame 51##NM_152670|C2orf51|200523|chromosome 2 open reading frame 51##BC029522|C2orf51|200523|chromosome 2 open reading frame 51##AF110146|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126354|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##BC126356|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK128659|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AK315287|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##AF193339|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3##NM_004836|EIF2AK3|9451|eukaryotic translation initiation factor 2-alpha kinase 3	0.951817	CTCF.p2:20:0.952
chr3	43003219	43003400	reg1026572.p1	5.099	+	NM_001205272 BC062786 AK130974 TSC_hg19_v1_chr3_+_42977866 AK296046	-25451	+	TSC_hg19_v1_chr3_+_42947649 NM_001134656 AK128676	-55652	+	AK127779 NM_207404	-55908	+	NM_001129908 AK311059 AK311069 AK091001 AX746726	17484	+	TSC_hg19_v1_chr3_-_43147568 BC060861 NM_032806	144242	-	TSC_hg19_v1_chr3_+_43328077 AK291360 NM_001100594 NM_017719 BC071567 AK295187 CR749621 AK314376	324760	+	NM_001205272|KRBOX1|100506243|KRAB box domain containing 1##BC062786|KRBOX1|100506243|KRAB box domain containing 1##AK130974|KRBOX1|100506243|KRAB box domain containing 1##NM_001134656|ZNF662|389114|zinc finger protein 662##AK128676|ZNF662|389114|zinc finger protein 662##AK127779|ZNF662|389114|zinc finger protein 662##NM_207404|ZNF662|389114|zinc finger protein 662##NM_001129908|FAM198A|729085|family with sequence similarity 198, member A##AK311059|FAM198A|729085|family with sequence similarity 198, member A##AK311069|FAM198A|729085|family with sequence similarity 198, member A##AK091001|FAM198A|729085|family with sequence similarity 198, member A##BC060861|C3orf39|84892|chromosome 3 open reading frame 39##NM_032806|C3orf39|84892|chromosome 3 open reading frame 39##AK291360|SNRK|54861|SNF related kinase##NM_001100594|SNRK|54861|SNF related kinase##NM_017719|SNRK|54861|SNF related kinase##BC071567|SNRK|54861|SNF related kinase##AK295187|SNRK|54861|SNF related kinase##CR749621|SNRK|54861|SNF related kinase##AK314376|SNRK|54861|SNF related kinase	0.943623	CTCF.p2:-11:0.944
chr5	171486745	171486882	reg1027324.p1	5.099	+	BC026213 NM_012300 NM_033644 NM_033645	-52937	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	-53169	-	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	-53285	-	AB015718 TSC_hg19_v1_chr5_-_171615170	128325	-	AK307943 TSC_hg19_v1_chr5_-_171615203	128390	-	TSC_hg19_v1_chr5_-_171615241 BC070077 AK313350	128460	-	BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB015718|STK10|6793|serine/threonine kinase 10##AK307943|STK10|6793|serine/threonine kinase 10##BC070077|STK10|6793|serine/threonine kinase 10##AK313350|STK10|6793|serine/threonine kinase 10	0.999674	CTCF.p2:20:1.000
chr11	35105051	35105230	reg1028346.p2	5.098	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-166983	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-167251	-	NM_001135024 NM_001166158 NM_003477	-167464	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	55260	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	55594	+	TSC_hg19_v1_chr11_+_35160821 M59040	55678	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr1	40723777	40723957	reg1027538.p2	5.098	+	AF064867 TSC_hg19_v1_chr1_+_40723850 AK075007	-21	+	TSC_hg19_v1_chr1_+_40723742 NM_005857 AB016068 BC037283	-91	+	BC012000 TSC_hg19_v1_chr1_-_40723621 AK054902	-252	-	TSC_hg19_v1_chr1_+_40723881 AK074784	7	+	TSC_hg19_v1_chr1_+_40723907 Y13834	41	+	TSC_hg19_v1_chr1_+_40723926 EU176257 EU176564	70	+	AF064867|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##AK075007|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##NM_005857|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##AB016068|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##BC037283|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##AK074784|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##Y13834|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##EU176257|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##EU176564|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)	0.0	
chr14	56331638	56331762	reg1027329.p2	5.098	+	L25616 TSC_hg19_v1_chr14_+_56078737 AB527439	-252951	+	TSC_hg19_v1_chr14_+_56046963 NM_001079521 NM_001079522 NM_004986 NM_182926 BC066337 D13629 AK302797 BC050555 BC058736 Z22551 AY264265 BC112337	-284598	+	BX248296 TSC_hg19_v1_chr14_-_56046835 AK124927	-284884	-	TSC_hg19_v1_chr14_+_56585131 BC009476 NM_021255 AK315727	253294	+	TSC_hg19_v1_chr14_+_56585163 AF302502	253474	+	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	714845	+	L25616|KTN1|3895|kinectin 1 (kinesin receptor)##NM_001079521|KTN1|3895|kinectin 1 (kinesin receptor)##NM_001079522|KTN1|3895|kinectin 1 (kinesin receptor)##NM_004986|KTN1|3895|kinectin 1 (kinesin receptor)##NM_182926|KTN1|3895|kinectin 1 (kinesin receptor)##BC066337|KTN1|3895|kinectin 1 (kinesin receptor)##D13629|KTN1|3895|kinectin 1 (kinesin receptor)##AK302797|KTN1|3895|kinectin 1 (kinesin receptor)##BC050555|KTN1|3895|kinectin 1 (kinesin receptor)##BC058736|KTN1|3895|kinectin 1 (kinesin receptor)##Z22551|KTN1|3895|kinectin 1 (kinesin receptor)##AY264265|KTN1|3895|kinectin 1 (kinesin receptor)##BC112337|KTN1|3895|kinectin 1 (kinesin receptor)##BX248296|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##AK124927|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##BC009476|PELI2|57161|pellino homolog 2 (Drosophila)##NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)##AK315727|PELI2|57161|pellino homolog 2 (Drosophila)##AF302502|PELI2|57161|pellino homolog 2 (Drosophila)##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101	0.946487	CTCF.p2:-15:0.946
chr19	55657539	55657674	reg1022471.p1	5.098	+	AB209452 TSC_hg19_v1_chr19_-_55629006 AF312028 NM_017607	-28674	-	AK000265 AK301615 NM_017729 BC015763 CU677435	-65797	+	AK309305 NM_133180 AF370395 AK075098 AK296732	-70361	+	TSC_hg19_v1_chr19_-_55658311 AY762903 AY762904 BT019630 S51938	811	-	S69208 S69209 BC022086 BC010963 AK291352 AK308199 BC007074 BC034143 BC107798 M19308 M19309 TSC_hg19_v1_chr19_-_55660575 NM_001126132 NM_001126133 NM_003283	2975	-	BT019517 CR541985 CR542012 M64247 BC096165 BC096166 BC096167 BC099631 X54163 AK223451 EU747720 NM_000363	11421	-	AB209452|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##AF312028|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##NM_017607|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##AK000265|EPS8L1|54869|EPS8-like 1##AK301615|EPS8L1|54869|EPS8-like 1##NM_017729|EPS8L1|54869|EPS8-like 1##BC015763|EPS8L1|54869|EPS8-like 1##AK309305|EPS8L1|54869|EPS8-like 1##NM_133180|EPS8L1|54869|EPS8-like 1##AF370395|EPS8L1|54869|EPS8-like 1##AK075098|EPS8L1|54869|EPS8-like 1##AK296732|EPS8L1|54869|EPS8-like 1##AY762903|TNNT1|7138|troponin T type 1 (skeletal, slow)##AY762904|TNNT1|7138|troponin T type 1 (skeletal, slow)##BT019630|TNNT1|7138|troponin T type 1 (skeletal, slow)##S51938|TNNT1|7138|troponin T type 1 (skeletal, slow)##S69208|TNNT1|7138|troponin T type 1 (skeletal, slow)##S69209|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC022086|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC010963|TNNT1|7138|troponin T type 1 (skeletal, slow)##AK291352|TNNT1|7138|troponin T type 1 (skeletal, slow)##AK308199|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC007074|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC034143|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC107798|TNNT1|7138|troponin T type 1 (skeletal, slow)##M19308|TNNT1|7138|troponin T type 1 (skeletal, slow)##M19309|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_001126132|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_001126133|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_003283|TNNT1|7138|troponin T type 1 (skeletal, slow)##BT019517|TNNI3|7137|troponin I type 3 (cardiac)##CR541985|TNNI3|7137|troponin I type 3 (cardiac)##CR542012|TNNI3|7137|troponin I type 3 (cardiac)##M64247|TNNI3|7137|troponin I type 3 (cardiac)##BC096165|TNNI3|7137|troponin I type 3 (cardiac)##BC096166|TNNI3|7137|troponin I type 3 (cardiac)##BC096167|TNNI3|7137|troponin I type 3 (cardiac)##BC099631|TNNI3|7137|troponin I type 3 (cardiac)##X54163|TNNI3|7137|troponin I type 3 (cardiac)##AK223451|TNNI3|7137|troponin I type 3 (cardiac)##EU747720|TNNI3|7137|troponin I type 3 (cardiac)##NM_000363|TNNI3|7137|troponin I type 3 (cardiac)	0.17992	
chr19	7968477	7968617	reg1025826.p2	5.098	+	AK125117 TSC_hg19_v1_chr19_-_7968430	-119	-	TSC_hg19_v1_chr19_+_7953422 AK091134 AX746798 BC070089 NM_025061 BX538180	-15127	+	NM_001190467 TSC_hg19_v1_chr19_-_7939337	-29207	-	TSC_hg19_v1_chr19_+_7968761 BC038295	184	+	TSC_hg19_v1_chr19_+_7968762 AK313899	215	+	AF013588 AF013589 NM_145185 TSC_hg19_v1_chr19_+_7968764	217	+	AK091134|LRRC8E|80131|leucine rich repeat containing 8 family, member E##BC070089|LRRC8E|80131|leucine rich repeat containing 8 family, member E##NM_025061|LRRC8E|80131|leucine rich repeat containing 8 family, member E##BX538180|LRRC8E|80131|leucine rich repeat containing 8 family, member E##NM_001190467|FLJ22184|80164|putative uncharacterized protein FLJ22184##BC038295|MAP2K7|5609|mitogen-activated protein kinase kinase 7##AK313899|MAP2K7|5609|mitogen-activated protein kinase kinase 7##AF013588|MAP2K7|5609|mitogen-activated protein kinase kinase 7##AF013589|MAP2K7|5609|mitogen-activated protein kinase kinase 7##NM_145185|MAP2K7|5609|mitogen-activated protein kinase kinase 7	0.059487	
chr2	219984203	219984310	reg1006968.p1	5.098	+	BC136587 BC136588 NM_002181	-59019	-	AK127189 AK302678 AK302688 BC031585 NM_152389 NM_194302 BC047637	-78014	-	AF166331 NM_005209 BC006285 NM_057093 NM_057094	-126133	-	TSC_hg19_v1_chr2_-_220025558 BC012732 AK022672 AJ972687 BC030986 NM_024782	41283	-	DQ891019 DQ894199 CU688862 AK091919 BC030243 AK298256 AK298277 AK055730 NM_001144889 NM_001144890 NM_144712	50505	-	CR457401 CU674686 AK311656 TSC_hg19_v1_chr2_-_220041648 BC001393 AK314975 AK075274 BC012821 AY007160 NM_015680	57371	-	BC136587|IHH|3549|Indian hedgehog##BC136588|IHH|3549|Indian hedgehog##NM_002181|IHH|3549|Indian hedgehog##AK127189|CCDC108|255101|coiled-coil domain containing 108##AK302678|CCDC108|255101|coiled-coil domain containing 108##AK302688|CCDC108|255101|coiled-coil domain containing 108##BC031585|CCDC108|255101|coiled-coil domain containing 108##NM_152389|CCDC108|255101|coiled-coil domain containing 108##NM_194302|CCDC108|255101|coiled-coil domain containing 108##BC047637|CCDC108|255101|coiled-coil domain containing 108##AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2##BC012732|NHEJ1|79840|nonhomologous end-joining factor 1##AK022672|NHEJ1|79840|nonhomologous end-joining factor 1##AJ972687|NHEJ1|79840|nonhomologous end-joining factor 1##BC030986|NHEJ1|79840|nonhomologous end-joining factor 1##NM_024782|NHEJ1|79840|nonhomologous end-joining factor 1##DQ891019|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##DQ894199|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##BC030243|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298256|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK298277|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##AK055730|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144889|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_001144890|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##NM_144712|SLC23A3|151295|solute carrier family 23 (nucleobase transporters), member 3##CR457401|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC001393|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK314975|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AK075274|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##BC012821|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##AY007160|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1##NM_015680|CNPPD1|27013|cyclin Pas1/PHO80 domain containing 1	0.991867	
chr5	39579137	39579267	reg1025438.p1	5.098	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-153885	-	TSC_hg19_v1_chr5_-_39425082 AK314381	-154138	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	-154251	-	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	1100825	+	TSC_hg19_v1_chr5_+_40680042 L25124	1100842	+	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	1176838	-	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33	0.987742	CTCF.p2:-23:0.988
chr7	25019681	25019832	reg1017469.p2	5.098	+	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	-12	-	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-222159	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-222417	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	145121	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	145184	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	200115	-	AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31	0.0	
chr1	233016270	233016357	reg1024427.p1	5.097	+	AK290216 TSC_hg19_v1_chr1_+_232941173 BC036663 AB037804	-75162	+	NM_019090 BC109122	-75609	+	TSC_hg19_v1_chr1_-_232878472 AK093200	-137856	-	AK311229 AK316591 TSC_hg19_v1_chr1_+_233086356 BC005102 NM_032324	70031	+	TSC_hg19_v1_chr1_+_233086381 AF416713	70076	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	415170	-	AK290216|KIAA1383|54627|KIAA1383##BC036663|KIAA1383|54627|KIAA1383##AB037804|KIAA1383|54627|KIAA1383##NM_019090|KIAA1383|54627|KIAA1383##BC109122|KIAA1383|54627|KIAA1383##AK311229|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK316591|NTPCR|84284|nucleoside-triphosphatase, cancer-related##BC005102|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_032324|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)	0.0	
chr13	50961307	50961422	reg1023923.p2	5.097	+	AJ412041 AJ412042 AJ412043 TSC_hg19_v1_chr13_+_50760088	-201311	+	TSC_hg19_v1_chr13_-_50699781 AF380424	-261549	-	AJ412023 AJ412024 AJ412025 AJ412026 AJ412038 AJ412039 AJ412054 AJ412055 AJ412056 AJ412057 AJ412058 AJ412059 AJ412060 AJ412061 AJ412062 Y15227 TSC_hg19_v1_chr13_+_50656364 BC004131 AK312167 BC020692 AK095311	-305019	+	AY357595 BC104892 BC112009 NM_198989 AK303567 AK126830	456588	-	NM_001142279 NM_024570 TSC_hg19_v1_chr13_+_51483898	522492	+	TSC_hg19_v1_chr13_+_51483905 AY764036	522540	+	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AJ412023|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412024|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412061|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412062|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##Y15227|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC020692|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AK095311|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7##AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_001142279|RNASEH2B|79621|ribonuclease H2, subunit B##NM_024570|RNASEH2B|79621|ribonuclease H2, subunit B##AY764036|RNASEH2B|79621|ribonuclease H2, subunit B	0.090456	
chr2	18569098	18569223	reg1030394.p1	5.097	+	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	-509206	+	NM_001105569	-571375	+	TSC_hg19_v1_chr2_+_17935407 CR936783 NM_001130009 AK093631 AX748233	-633749	+	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	172756	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	201650	-	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	989219	-	AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_001105569|MSGN1|343930|mesogenin 1##CR936783|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##NM_001130009|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK093631|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)	0.997292	CTCF.p2:-17:0.997
chr6	133361298	133361384	reg1028159.p1	5.097	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	-225622	+	TSC_hg19_v1_chr6_+_133135707 AK096147 NM_001016 D28378 X53505	-225634	+	AK124442 BC069570 AK293853 TSC_hg19_v1_chr6_-_133119740 NM_052831 AK289918	-241640	-	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	201150	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	201191	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	848913	+	AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##AK096147|SNORA33|594839|small nucleolar RNA, H/ACA box 33##NM_001016|RPS12|6206|ribosomal protein S12##D28378|RPS12|6206|ribosomal protein S12##X53505|RPS12|6206|ribosomal protein S12##AK124442|C6orf192|116843|chromosome 6 open reading frame 192##BC069570|C6orf192|116843|chromosome 6 open reading frame 192##AK293853|C6orf192|116843|chromosome 6 open reading frame 192##NM_052831|C6orf192|116843|chromosome 6 open reading frame 192##AK289918|C6orf192|116843|chromosome 6 open reading frame 192##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21	0.664817	CTCF.p2:-5:0.665
chr7	47892436	47892526	reg1030416.p1	5.097	+	AK024728 NM_025031 BC113679 BC113681 AK092057 AX747337	-57543	+	AK126096 NM_001123065	-197640	+	TSC_hg19_v1_chr7_-_47622186 AB208995	-270295	-	AB061683 NM_138295	95572	-	BT019481 BT019482 CR536552 Y16893 AB463759 BC007013 TSC_hg19_v1_chr7_-_48019149 AK294117 AK290459 AF076844 AF110393	126671	-	TSC_hg19_v1_chr7_-_48019247 NM_004507	126748	-	AK024728|C7orf69|80099|chromosome 7 open reading frame 69##NM_025031|C7orf69|80099|chromosome 7 open reading frame 69##BC113679|C7orf69|80099|chromosome 7 open reading frame 69##BC113681|C7orf69|80099|chromosome 7 open reading frame 69##AK092057|PKD1L1|168507|polycystic kidney disease 1 like 1##AK126096|C7orf65|401335|chromosome 7 open reading frame 65##NM_001123065|C7orf65|401335|chromosome 7 open reading frame 65##AB208995|TNS3|64759|tensin 3##AB061683|PKD1L1|168507|polycystic kidney disease 1 like 1##NM_138295|PKD1L1|168507|polycystic kidney disease 1 like 1##BT019481|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BT019482|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##CR536552|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##Y16893|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BC007013|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK294117|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK290459|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF076844|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF110393|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##NM_004507|HUS1|3364|HUS1 checkpoint homolog (S. pombe)	0.032266	
chr7	99650994	99651114	reg1027769.p1	5.097	+	NM_145914 TSC_hg19_v1_chr7_+_99647416 CR749301 BC047309 AK301871	-3624	+	AK075324 TSC_hg19_v1_chr7_+_99647394 AK292267 AK313884	-3656	+	TSC_hg19_v1_chr7_+_99627917 U09848	-23116	+	TSC_hg19_v1_chr7_-_99679347 BC011887 BC025265 BC013603 AK297625 AF193057 AF217988 AK315479 AK091984 AX747291 NM_017715 NM_032924	28273	-	BC041695 TSC_hg19_v1_chr7_-_99680201	29133	-	AK309719 TSC_hg19_v1_chr7_-_99680369	29314	-	NM_145914|ZSCAN21|7589|zinc finger and SCAN domain containing 21##CR749301|ZSCAN21|7589|zinc finger and SCAN domain containing 21##BC047309|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK301871|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK075324|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK292267|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK313884|ZSCAN21|7589|zinc finger and SCAN domain containing 21##U09848|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC011887|ZNF3|7551|zinc finger protein 3##BC025265|ZNF3|7551|zinc finger protein 3##BC013603|ZNF3|7551|zinc finger protein 3##AK297625|ZNF3|7551|zinc finger protein 3##AF193057|ZNF3|7551|zinc finger protein 3##AF217988|ZNF3|7551|zinc finger protein 3##AK315479|ZNF3|7551|zinc finger protein 3##AK091984|ZNF3|7551|zinc finger protein 3##NM_017715|ZNF3|7551|zinc finger protein 3##NM_032924|ZNF3|7551|zinc finger protein 3##AK309719|ZNF3|7551|zinc finger protein 3	0.776396	CTCF.p2:23:0.776
chr9	140657133	140657247	reg1026810.p2	5.097	+	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	-18661	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-143723	+	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	-143747	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	115044	+	TSC_hg19_v1_chr9_+_140918045 AB209467	260884	+	TSC_hg19_v1_chr9_+_141044539 AK308459	387361	+	AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AK308459|TUBBP5|643224|tubulin, beta pseudogene 5	0.0	
chrX	99941009	99941145	reg1000693.p2	5.097	+	BC020733 TSC_hg19_v1_chrX_+_99899388	-41682	+	NM_014467 TSC_hg19_v1_chrX_+_99899195 AK075462 AF060567 AF393649	-41845	+	BT006977 CR457115 AB527646 DQ890668 DQ893849 TSC_hg19_v1_chrX_-_99891804 AF053453 AK299176 AF133426 AK309581 AY358825 AB097016 AF043906 U84895 BC012389 NM_003270 AK075072 AB209876 AK315773 AK300852	-49309	-	AK313086 BC014913 TSC_hg19_v1_chrX_-_99986519 NM_001174068 NM_080737	45434	-	TSC_hg19_v1_chrX_-_99987103 BX537410 AK292588 AK094110 NM_001129896	46026	-	NM_001325 TSC_hg19_v1_chrX_+_100075379	134287	+	BC020733|SRPX2|27286|sushi-repeat containing protein, X-linked 2##NM_014467|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AK075462|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF060567|SRPX2|27286|sushi-repeat containing protein, X-linked 2##AF393649|SRPX2|27286|sushi-repeat containing protein, X-linked 2##BT006977|TSPAN6|7105|tetraspanin 6##CR457115|TSPAN6|7105|tetraspanin 6##DQ890668|TSPAN6|7105|tetraspanin 6##DQ893849|TSPAN6|7105|tetraspanin 6##AF053453|TSPAN6|7105|tetraspanin 6##AK299176|TSPAN6|7105|tetraspanin 6##AF133426|TSPAN6|7105|tetraspanin 6##AK309581|TSPAN6|7105|tetraspanin 6##AY358825|TSPAN6|7105|tetraspanin 6##AB097016|TSPAN6|7105|tetraspanin 6##AF043906|TSPAN6|7105|tetraspanin 6##U84895|TSPAN6|7105|tetraspanin 6##BC012389|TSPAN6|7105|tetraspanin 6##NM_003270|TSPAN6|7105|tetraspanin 6##AK075072|TSPAN6|7105|tetraspanin 6##AB209876|TSPAN6|7105|tetraspanin 6##AK315773|TSPAN6|7105|tetraspanin 6##AK300852|TSPAN6|7105|tetraspanin 6##AK313086|SYTL4|94121|synaptotagmin-like 4##BC014913|SYTL4|94121|synaptotagmin-like 4##NM_001174068|SYTL4|94121|synaptotagmin-like 4##NM_080737|SYTL4|94121|synaptotagmin-like 4##BX537410|SYTL4|94121|synaptotagmin-like 4##AK292588|SYTL4|94121|synaptotagmin-like 4##NM_001129896|SYTL4|94121|synaptotagmin-like 4##NM_001325|CSTF2|1478|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa	0.0	
chr1	249099349	249099497	reg1026779.p2	5.096	+	NM_001004734 BC137188 BC137189	-253807	-	NM_001001824	-285239	-	NM_001001827 AB528813	-296864	-	AY358453 TSC_hg19_v1_chr1_-_249120082 AK056382 NM_030645	20685	-	TSC_hg19_v1_chr1_+_249132449 BC029310	33034	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	33122	+	NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##NM_001001824|OR2T27|403239|olfactory receptor, family 2, subfamily T, member 27##NM_001001827|OR2T35|403244|olfactory receptor, family 2, subfamily T, member 35##AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like##AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like##BC029310|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672	0.0	
chr14	29485614	29485737	reg1029686.p1	5.096	+	TSC_hg19_v1_chr14_+_29241992 BX248251	-243680	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-248762	+	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	-249447	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	911179	-	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	1542685	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	1605849	+	BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1	0.999552	CTCF.p2:10:1.000
chr2	125673292	125673387	reg1026109.p1	5.096	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-890475	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-3160102	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-3178874	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	1740368	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	1740453	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	2191402	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.0	
chr5	175267388	175267518	reg1028524.p1	5.096	+	TSC_hg19_v1_chr5_+_175223538 NM_006650 U35100	-43889	+	NM_022304	-158990	+	TSC_hg19_v1_chr5_+_175085101 AB023487	-182342	+	TSC_hg19_v1_chr5_+_175298517 AY576870 NM_001008220 AK124837	31056	+	TSC_hg19_v1_chr5_+_175298551 AK314177	31092	+	TSC_hg19_v1_chr5_+_175298607 AK293819	31157	+	NM_006650|CPLX2|10814|complexin 2##U35100|CPLX2|10814|complexin 2##NM_022304|HRH2|3274|histamine receptor H2##AB023487|HRH2|3274|histamine receptor H2##AY576870|CPLX2|10814|complexin 2##NM_001008220|CPLX2|10814|complexin 2##AK124837|CPLX2|10814|complexin 2##AK314177|CPLX2|10814|complexin 2##AK293819|CPLX2|10814|complexin 2	0.232258	
chr6	139494450	139494603	reg1028403.p1	5.096	+	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	-38270	+	TSC_hg19_v1_chr6_+_139349935 AK309402 AF116682 BC014953	-144608	+	NM_021243 AF161398 TSC_hg19_v1_chr6_+_139349850	-144689	+	TSC_hg19_v1_chr6_-_139613136 BX647633 AL834248 AL831988 AK314725 BX647477 BC115383 BC115384 AB085905 NM_153235	118634	-	NM_001168389 NM_001168388	200897	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	201235	-	BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)##AF116682|C6orf115|58527|chromosome 6 open reading frame 115##BC014953|C6orf115|58527|chromosome 6 open reading frame 115##NM_021243|C6orf115|58527|chromosome 6 open reading frame 115##AF161398|C6orf115|58527|chromosome 6 open reading frame 115##BX647633|TXLNB|167838|taxilin beta##AL834248|TXLNB|167838|taxilin beta##AL831988|TXLNB|167838|taxilin beta##AK314725|TXLNB|167838|taxilin beta##BX647477|TXLNB|167838|taxilin beta##BC115383|TXLNB|167838|taxilin beta##BC115384|TXLNB|167838|taxilin beta##AB085905|TXLNB|167838|taxilin beta##NM_153235|TXLNB|167838|taxilin beta##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	0.0	
chr1	114576021	114576150	reg1029489.p1	5.095	+	AY358954 NM_020190 AY464015 AK092766 AX747716 AK075369 TSC_hg19_v1_chr1_+_114522099 AK297902 AF201945 AK223221 BC009920 AK222471 AK075479 AK075353 AK075544 AB590196 DQ892781 DQ896028 CU679529	-54002	+	BC036057 NM_181358	-79587	+	BC028408 NM_198269	-82319	+	AK056448 NM_205848	118976	-	BC044948 NM_001253772	120386	-	TSC_hg19_v1_chr1_-_115053724 AB384564 AB029036	477625	-	AY358954|OLFML3|56944|olfactomedin-like 3##NM_020190|OLFML3|56944|olfactomedin-like 3##AY464015|OLFML3|56944|olfactomedin-like 3##AK092766|OLFML3|56944|olfactomedin-like 3##AK075369|OLFML3|56944|olfactomedin-like 3##AK297902|OLFML3|56944|olfactomedin-like 3##AF201945|OLFML3|56944|olfactomedin-like 3##AK223221|OLFML3|56944|olfactomedin-like 3##BC009920|OLFML3|56944|olfactomedin-like 3##AK222471|OLFML3|56944|olfactomedin-like 3##AK075479|OLFML3|56944|olfactomedin-like 3##AK075353|OLFML3|56944|olfactomedin-like 3##AK075544|OLFML3|56944|olfactomedin-like 3##DQ892781|OLFML3|56944|olfactomedin-like 3##DQ896028|OLFML3|56944|olfactomedin-like 3##BC036057|HIPK1|204851|homeodomain interacting protein kinase 1##NM_181358|HIPK1|204851|homeodomain interacting protein kinase 1##BC028408|HIPK1|204851|homeodomain interacting protein kinase 1##NM_198269|HIPK1|204851|homeodomain interacting protein kinase 1##AK056448|SYT6|148281|synaptotagmin VI##NM_205848|SYT6|148281|synaptotagmin VI##BC044948|SYT6|148281|synaptotagmin VI##NM_001253772|SYT6|148281|synaptotagmin VI##AB029036|TRIM33|51592|tripartite motif containing 33	0.157372	
chr17	40253559	40253659	reg1003369.p1	5.095	+	NM_001242704	-63566	-	TSC_hg19_v1_chr17_+_40172124 AK027265 AK297975 AK054571 BC007316 BC007450	-81463	+	NM_001144927 NM_001144928 NM_001144929 NM_017595 TSC_hg19_v1_chr17_+_40172107	-81511	+	BC014949 AK296840 AK300900 AK021416 AK225549 NM_024119	11109	-	TSC_hg19_v1_chr17_-_40273386 AB527835 AF029777 BC032743 BC105977 BC039907 NM_021078	19740	-	NM_033194 BC093991 BC093993 AK130947	21192	+	NM_001242704|ZNF385C|201181|zinc finger protein 385C##AK027265|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK297975|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK054571|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007316|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007450|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144927|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144928|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144929|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_017595|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC014949|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK296840|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK300900|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK021416|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK225549|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_024119|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AF029777|KAT2A|2648|K(lysine) acetyltransferase 2A##BC032743|KAT2A|2648|K(lysine) acetyltransferase 2A##BC105977|KAT2A|2648|K(lysine) acetyltransferase 2A##BC039907|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_021078|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_033194|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093991|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093993|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##AK130947|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9	0.0	
chr2	6966695	6966825	reg1028347.p1	5.095	+	U23752 AB028641 NM_003108 BC025789 AB464713	-1133945	+	AK302299 NM_018436 BC029652	-3260963	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-3324191	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	39140	-	TSC_hg19_v1_chr2_-_7006650 AK308509	39943	-	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	51103	+	U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2	0.935341	CTCF.p2:-18:0.935
chr11	128188963	128189144	reg1023262.p2	5.094	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1315748	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1318328	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1318393	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	202910	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	203081	-	BX640634 NM_001143820	268399	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.191404	
chr13	92228987	92229093	reg1027650.p1	5.094	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-178136	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3904171	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5855601	-	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1650387	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	2902786	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	3019389	-	BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase	0.950955	CTCF.p2:14:0.951
chr1	60437179	60437321	reg1026880.p1	5.094	+	BC032594 TSC_hg19_v1_chr1_-_60392478	-44781	-	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	-44865	-	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	-156598	+	BC027878 AK124828 NM_152377	102183	-	AK092769 TSC_hg19_v1_chr1_+_61542908	1105606	+	TSC_hg19_v1_chr1_+_61542928 AK299289 NM_001145511	1105686	+	BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)##BC027878|C1orf87|127795|chromosome 1 open reading frame 87##AK124828|C1orf87|127795|chromosome 1 open reading frame 87##NM_152377|C1orf87|127795|chromosome 1 open reading frame 87##AK299289|NFIA|4774|nuclear factor I/A##NM_001145511|NFIA|4774|nuclear factor I/A	0.998183	CTCF.p2:-17:0.998
chr4	27098192	27098331	reg1027576.p1	5.094	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-235721	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-512581	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-606276	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3623738	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3623933	+	TSC_hg19_v1_chr4_+_30722465 AB006756	3624198	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.430249	CTCF.p2:-13:0.430
chr11	35163003	35163123	reg1024879.p2	5.093	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-2203	+	TSC_hg19_v1_chr11_+_35160821 M59040	-2245	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	-2329	+	TSC_hg19_v1_chr11_+_35198199 AK129808	35149	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	115762	-	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	277648	-	AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##AK129808|CD44|960|CD44 molecule (Indian blood group)##CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.168213	
chr11	64863509	64863653	reg1023551.p1	5.093	+	NM_001242631 AK124141	-7022	-	TSC_hg19_v1_chr11_+_64851731 BC012530 BC012814 AF043611	-11801	+	TSC_hg19_v1_chr11_+_64851693 NM_006782 AF030291 AF001891 AK295279 AK316044 AK291964 AK308740	-11875	+	TSC_hg19_v1_chr11_+_64863684 AF024631 NM_013265	64	+	TSC_hg19_v1_chr11_+_64863710 BC010540	124	+	BC010872 TSC_hg19_v1_chr11_+_64863712 BC007198 BC017438	133	+	NM_001242631|LOC100130348|100130348|uncharacterized LOC100130348##AK124141|LOC399904|399904|uncharacterized LOC399904##BC012530|ZFPL1|7542|zinc finger protein-like 1##BC012814|ZFPL1|7542|zinc finger protein-like 1##AF043611|ZFPL1|7542|zinc finger protein-like 1##NM_006782|ZFPL1|7542|zinc finger protein-like 1##AF030291|ZFPL1|7542|zinc finger protein-like 1##AF001891|ZFPL1|7542|zinc finger protein-like 1##AK295279|ZFPL1|7542|zinc finger protein-like 1##AK316044|ZFPL1|7542|zinc finger protein-like 1##AK291964|ZFPL1|7542|zinc finger protein-like 1##AK308740|ZFPL1|7542|zinc finger protein-like 1##AF024631|C11orf2|738|chromosome 11 open reading frame 2##NM_013265|C11orf2|738|chromosome 11 open reading frame 2##BC010540|C11orf2|738|chromosome 11 open reading frame 2##BC010872|C11orf2|738|chromosome 11 open reading frame 2##BC007198|C11orf2|738|chromosome 11 open reading frame 2##BC017438|C11orf2|738|chromosome 11 open reading frame 2	0.0	
chr16	80118622	80118726	reg1025877.p2	5.093	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-484059	-	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-1985219	+	NM_001244755	-2055689	+	AF125108 NM_130897 BC054892 BC035232	456214	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	719373	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	921410	+	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N	0.40642	CTCF.p2:19:0.406
chr22	21997401	21997530	reg1026690.p2	5.093	+	TSC_hg19_v1_chr22_+_21996619 CR456570 AF277316 AB528230 BC139837 CU013169 CU013457	-826	+	TSC_hg19_v1_chr22_+_21996608 BC006248 AB043007	-864	+	TSC_hg19_v1_chr22_+_21996575 AY359118	-891	+	NM_014337 NM_148175 NM_148176 TSC_hg19_v1_chr22_+_22020298 AF320072 AK289545 BC000022 U37219 AK127259 BC028385 AK299206 CR456548 DQ891659 DQ894846 AB463162 CU013148 CU013436 CU673996 CU688484	22864	+	BC034486 BC074501 TSC_hg19_v1_chr22_-_22090057 BC048303 NM_013313 AB098734 AB098735	92583	-	TSC_hg19_v1_chr22_-_22221936 DQ399292 AB384931 EU176323 EU831429 EU831522 AK307615 Z11694 AK090869 BC099905	224364	-	CR456570|SDF2L1|23753|stromal cell-derived factor 2-like 1##AF277316|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC139837|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013169|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013457|SDF2L1|23753|stromal cell-derived factor 2-like 1##AB043007|SDF2L1|23753|stromal cell-derived factor 2-like 1##AY359118|SDF2L1|23753|stromal cell-derived factor 2-like 1##NM_014337|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148175|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148176|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AF320072|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK289545|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC000022|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##U37219|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK127259|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC028385|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK299206|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456548|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ891659|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ894846|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013148|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013436|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC034486|YPEL1|29799|yippee-like 1 (Drosophila)##BC074501|YPEL1|29799|yippee-like 1 (Drosophila)##BC048303|YPEL1|29799|yippee-like 1 (Drosophila)##NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)##AB098734|YPEL1|29799|yippee-like 1 (Drosophila)##AB098735|YPEL1|29799|yippee-like 1 (Drosophila)##DQ399292|MAPK1|5594|mitogen-activated protein kinase 1##EU176323|MAPK1|5594|mitogen-activated protein kinase 1##EU831429|MAPK1|5594|mitogen-activated protein kinase 1##EU831522|MAPK1|5594|mitogen-activated protein kinase 1##AK307615|MAPK1|5594|mitogen-activated protein kinase 1##Z11694|MAPK1|5594|mitogen-activated protein kinase 1##AK090869|MAPK1|5594|mitogen-activated protein kinase 1##BC099905|MAPK1|5594|mitogen-activated protein kinase 1	0.074168	
chr12	52444807	52444944	reg1025999.p3	5.092	+	AK297526 NM_001202233	-28260	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	-44134	+	AK299496 NM_020327	-97712	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	341	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	18879	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	18923	+	AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44	0.015627	
chr13	42908541	42908722	reg1003684.p2	5.092	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	-62346	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	-196421	+	NM_152910 NM_178009 AB078967 AB078968	-285766	+	BC040889 NM_033012	228240	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	239703	+	NM_182508 AK310859 AK098238 BC093659 BC112237	447093	+	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30	0.0	
chr15	97127040	97127152	reg1028591.p1	5.092	+	NM_001145157	-250528	+	AK316086 NM_001145156	-251303	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	-253119	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	199576	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	1376823	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	1376855	+	NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4	0.755441	CTCF.p2:10:0.755
chr2	242962935	242963052	reg1027743.p1	5.092	+	AK090909 AX746675 BC113517 BC113519 NM_173821	-151111	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	-161969	-	AK091038 AX746745 NM_001167599 NM_001167602 NM_080741 BC012899	-210943	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	67866	+	None	None	None	None	None	None	AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1##AK091038|NEU4|129807|sialidase 4##NM_001167599|NEU4|129807|sialidase 4##NM_001167602|NEU4|129807|sialidase 4##NM_080741|NEU4|129807|sialidase 4##BC012899|NEU4|129807|sialidase 4##AK298283|LOC728323|728323|uncharacterized LOC728323	0.0	
chr5	153801552	153801661	reg1030172.p1	5.092	+	TSC_hg19_v1_chr5_+_153570292 BC050333 NM_198321 AK127135 AB078145 AB527381 AJ505950 AK074132	-231248	+	TSC_hg19_v1_chr5_+_153418558 AK315573 BC026244	-383046	+	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	-383082	+	TSC_hg19_v1_chr5_-_153825380 BC042059 AK095428	23761	-	TSC_hg19_v1_chr5_+_153825535 AK021588 NM_001131062 NM_001131063 NM_024632	23913	+	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	24004	+	BC050333|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##NM_198321|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK127135|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AB078145|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AJ505950|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK074132|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK315573|MFAP3|4238|microfibrillar-associated protein 3##BC026244|MFAP3|4238|microfibrillar-associated protein 3##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3##BC042059|FLJ38109|386627|uncharacterized LOC386627##AK095428|FLJ38109|386627|uncharacterized LOC386627##AK021588|SAP30L|79685|SAP30-like##NM_001131062|SAP30L|79685|SAP30-like##NM_001131063|SAP30L|79685|SAP30-like##NM_024632|SAP30L|79685|SAP30-like##AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like	0.995977	CTCF.p2:-6:0.996
chr10	73137081	73137210	reg1019377.p1	5.091	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-58099	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-58120	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-164765	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	19593	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	342447	-	AK074172 NM_001168390	360435	-	BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105	0.0	
chr2	106536467	106536588	reg1026994.p1	5.091	+	NM_001004720 BC000103	-68266	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	-103552	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	-174984	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	145637	+	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	274218	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	274231	-	NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1	0.809704	CTCF.p2:0:0.796
chr8	1729716	1729897	reg1001269.p2	5.091	+	TSC_hg19_v1_chr8_+_1712012 BC007725	-17770	+	NM_018941 TSC_hg19_v1_chr8_+_1711937 AK312486 AF123757 AF123758 AF123759 AF123760 AF123761	-17896	+	AF119818 AF119817 NM_004745	-280257	+	TSC_hg19_v1_chr8_+_1772112 AB002292 NM_014629 BC112926 CR749570	42333	+	TSC_hg19_v1_chr8_+_1922078 AB018254 NM_014867	192252	+	TSC_hg19_v1_chr8_+_1949299 AY762229	219444	+	BC007725|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##NM_018941|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AK312486|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123757|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123758|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123759|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123760|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123761|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##AB002292|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##NM_014629|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##BC112926|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##CR749570|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##AB018254|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##NM_014867|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY762229|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11	0.0	
chr8	53883313	53883433	reg1024791.p1	5.091	+	BC069117 BC107101 NM_005285	-30906	+	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	-256360	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	-256387	-	BC099912 AK310407 AY168006 NM_000912 AY466378	280839	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	872306	-	AK022345 TSC_hg19_v1_chr8_-_54755834	872454	-	BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1##BC099912|OPRK1|4986|opioid receptor, kappa 1##AK310407|OPRK1|4986|opioid receptor, kappa 1##AY168006|OPRK1|4986|opioid receptor, kappa 1##NM_000912|OPRK1|4986|opioid receptor, kappa 1##AY466378|OPRK1|4986|opioid receptor, kappa 1##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H	0.882614	CTCF.p2:-22:0.883
chr20	22228816	22228915	reg1023367.p1	5.090	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	-542332	+	TSC_hg19_v1_chr20_+_21686296 NM_006192	-542571	+	NM_002509	-734202	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	336051	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	336210	-	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	337237	-	BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1##NM_006192|PAX1|5075|paired box 1##NM_002509|NKX2-2|4821|NK2 homeobox 2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2	0.460774	CTCF.p2:24:0.461
chr5	106642424	106642602	reg1028723.p1	5.090	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-3744032	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4048056	+	BC024591 NM_015216 AB463068	-4177239	+	AK308672 NM_001962 U26403	364077	-	TSC_hg19_v1_chr5_-_107717106 AK126722	1074617	-	BC063316 NM_001163315	1075285	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.010024	
chr9	12716954	12717082	reg1033796.p1	5.090	+	NM_000550 X51420 BC052608	-23593	+	BC028038 NM_002839	-2104296	-	TSC_hg19_v1_chr9_+_8858136 AK094342	-3858885	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	57998	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	58763	+	AB384682 AF093419 BC140793 BC144564 NM_003829	533320	-	NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##HQ257895|C9orf150|286343|chromosome 9 open reading frame 150##AF093419|MPDZ|8777|multiple PDZ domain protein##BC140793|MPDZ|8777|multiple PDZ domain protein##BC144564|MPDZ|8777|multiple PDZ domain protein##NM_003829|MPDZ|8777|multiple PDZ domain protein	0.987632	CTCF.p2:17:0.988
chr10	16563046	16563155	reg1028588.p1	5.089	+	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	-84115	+	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	-660609	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	-801307	-	NM_001010908	903	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	296259	-	TSC_hg19_v1_chr10_-_16859397 AK225681 AK312520	296294	-	AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##NM_001010908|C1QL3|389941|complement component 1, q subcomponent-like 3##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1##AK225681|RSU1|6251|Ras suppressor protein 1##AK312520|RSU1|6251|Ras suppressor protein 1	0.035308	
chr12	108064978	108065083	reg1025636.p2	5.089	+	AK127295 NM_001017523	-90397	+	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	-352817	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-577420	-	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	14637	+	AK056378 TSC_hg19_v1_chr12_-_108154899	89809	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	89880	-	AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK056378|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4	0.505259	CTCF.p2:-13:0.505
chr1	235069209	235069345	reg1025548.p1	5.089	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-173503	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-324031	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-325419	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	222812	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	222954	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	255286	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr13	79820822	79820958	reg1025497.p2	5.089	+	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	-587597	-	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	-643167	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	-650608	+	BX648672 BC111697 BC111739 BC041655 NM_022118 TSC_hg19_v1_chr13_-_79979967 AK302871	159064	-	BC030806 TSC_hg19_v1_chr13_-_79980382	159493	-	TSC_hg19_v1_chr13_+_79980440 AK002196 BC034812	159561	+	AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##BX648672|RBM26|64062|RNA binding motif protein 26##BC111697|RBM26|64062|RNA binding motif protein 26##BC111739|RBM26|64062|RNA binding motif protein 26##BC041655|RBM26|64062|RNA binding motif protein 26##NM_022118|RBM26|64062|RNA binding motif protein 26##AK302871|RBM26|64062|RNA binding motif protein 26##BC030806|RBM26|64062|RNA binding motif protein 26##AK002196|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)##BC034812|RBM26-AS1|100505538|RBM26 antisense RNA 1 (non-protein coding)	0.909276	CTCF.p2:-1:0.909
chr20	36741970	36742074	reg1027198.p1	5.089	+	TSC_hg19_v1_chr20_+_36662228 AB463518 CU689672	-79745	+	TSC_hg19_v1_chr20_+_36662168 BC033629 AK312468 BC001696	-79855	+	TSC_hg19_v1_chr20_+_36661917 NM_021215 DQ372938	-80061	+	TSC_hg19_v1_chr20_-_36758362 M98479	16369	-	TSC_hg19_v1_chr20_-_36793673 AK291714 AK058031 AK295775 AK300292 AK314618 BC003551 NM_004613 NM_198951	51657	-	AK096202 NM_001029864	147151	-	BC033629|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##AK312468|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##BC001696|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##NM_021215|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##DQ372938|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##M98479|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291714|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK058031|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK295775|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK300292|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK314618|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC003551|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_004613|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_198951|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755	0.245291	CTCF.p2:-6:0.245
chr7	7581298	7581418	reg1002191.p2	5.089	+	BC136892 BC144431 AJ890451 NM_001037763	-5904	-	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	-359111	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-715460	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	25230	+	TSC_hg19_v1_chr7_+_7606667 AK294561	25328	+	BT007320 AB464142 TSC_hg19_v1_chr7_-_7680067 L07493 BC005264 AK311842	98729	-	BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##AK294561|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BT007320|RPA3|6119|replication protein A3, 14kDa##L07493|RPA3|6119|replication protein A3, 14kDa##BC005264|RPA3|6119|replication protein A3, 14kDa##AK311842|RPA3|6119|replication protein A3, 14kDa	0.0	
chrX	115010614	115010795	reg1010392.p2	5.089	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-182836	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-213662	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-215098	+	BC003645 TSC_hg19_v1_chrX_-_115085443	74735	-	AK313927 NM_000686 X87723 U16957	291291	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	557063	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chrX	153316682	153316782	reg1007983.p1	5.089	+	TSC_hg19_v1_chrX_-_153285340 BC054000 L76191 NM_001025242 NM_001025243 NM_001569	-31395	-	AF346607 DQ054788 AM392624 AM393211 EU831427 EU831520 AB463802 TSC_hg19_v1_chrX_-_153285300 BC014963	-31437	-	NM_003492	-78742	+	BC062546 TSC_hg19_v1_chrX_-_153363132 AF158180 AY541280	46328	-	TSC_hg19_v1_chrX_-_153363173 AK289444	46426	-	TSC_hg19_v1_chrX_-_153363175 BX538060 AB209464 GQ203293 GQ203294 GQ203295 GQ896382 GU479943 HM020402 HM156732 HM156733 HQ141378 HQ154629 NM_001110792 NM_004992	46448	-	BC054000|IRAK1|3654|interleukin-1 receptor-associated kinase 1##L76191|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_001025242|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_001025243|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_001569|IRAK1|3654|interleukin-1 receptor-associated kinase 1##AF346607|IRAK1|3654|interleukin-1 receptor-associated kinase 1##DQ054788|IRAK1|3654|interleukin-1 receptor-associated kinase 1##AM392624|IRAK1|3654|interleukin-1 receptor-associated kinase 1##AM393211|IRAK1|3654|interleukin-1 receptor-associated kinase 1##EU831427|IRAK1|3654|interleukin-1 receptor-associated kinase 1##EU831520|IRAK1|3654|interleukin-1 receptor-associated kinase 1##BC014963|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_003492|TMEM187|8269|transmembrane protein 187##BC062546|LOC728653|728653|uncharacterized LOC728653##AF158180|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##AY541280|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##AK289444|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##BX538060|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##AB209464|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GQ203293|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GQ203294|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GQ203295|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GQ896382|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##GU479943|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HM020402|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HM156732|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HM156733|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HQ141378|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##HQ154629|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##NM_001110792|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)##NM_004992|MECP2|4204|methyl CpG binding protein 2 (Rett syndrome)	0.0	
chr1	176812993	176813093	reg1024526.p1	5.088	+	AF342989 AF342990 BC062665 BC104644 NM_020318 NM_021936 BC152552	-380731	+	AF527539 TSC_hg19_v1_chr1_-_176176377	-636667	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	-636674	-	BC142697 AB006627 BC146795 TSC_hg19_v1_chr1_-_177133827	320782	-	AK307820 AK295126 BC032870 BC049377 TSC_hg19_v1_chr1_-_177134004 NM_004319 NM_207108	320943	-	TSC_hg19_v1_chr1_-_177134042 AK309094	321032	-	AF342989|PAPPA2|60676|pappalysin 2##AF342990|PAPPA2|60676|pappalysin 2##BC062665|PAPPA2|60676|pappalysin 2##BC104644|PAPPA2|60676|pappalysin 2##NM_020318|PAPPA2|60676|pappalysin 2##NM_021936|PAPPA2|60676|pappalysin 2##BC152552|PAPPA2|60676|pappalysin 2##AF527539|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2##BC142697|ASTN1|460|astrotactin 1##AB006627|ASTN1|460|astrotactin 1##BC146795|ASTN1|460|astrotactin 1##AK307820|ASTN1|460|astrotactin 1##AK295126|ASTN1|460|astrotactin 1##BC032870|ASTN1|460|astrotactin 1##BC049377|ASTN1|460|astrotactin 1##NM_004319|ASTN1|460|astrotactin 1##NM_207108|ASTN1|460|astrotactin 1##AK309094|ASTN1|460|astrotactin 1	0.0	
chr15	78376599	78376780	reg1024684.p2	5.088	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	-6736	-	TSC_hg19_v1_chr15_-_77924732 AK291363	-451909	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-451990	-	NM_001101404	8237	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	47073	-	TSC_hg19_v1_chr15_+_78441718 AK299970 AK096721 AK296002 BC036227 NM_005530 AK315963 CR749548 BC021967 AK316051	65016	+	AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2##AK299970|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK296002|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC036227|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##NM_005530|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK315963|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##CR749548|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC021967|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK316051|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha	0.0	
chr22	42792822	42793002	reg1021090.p1	5.088	+	BC038245 TSC_hg19_v1_chr22_-_42765218	-27710	-	AB527391 NM_005650 NM_181492	-181535	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	-266031	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	35469	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	122855	-	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	122902	-	NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)	0.0	
chr8	81110381	81110540	reg1027296.p1	5.088	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-26690	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-117431	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	-167958	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	288024	+	AK131274 NM_001033723	676555	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	913854	-	BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1	0.0	
chr12	54610923	54611057	reg1026911.p2	5.087	+	BC088352 BC000417 TSC_hg19_v1_chr12_-_54582755 AK091468 AX747003 NM_001243789 NM_001243790 BC105607 AK001789 AK001235 AK222473 AK290274 NM_001243787 NM_001243788 NM_001243791 NM_014311	-28304	-	BC030212 TSC_hg19_v1_chr12_-_54541132	-69909	-	TSC_hg19_v1_chr12_+_54519846 BC009385	-91132	+	BC006821 NM_001127322 TSC_hg19_v1_chr12_-_54653330	42334	-	NM_001127321 TSC_hg19_v1_chr12_-_54653370	42381	-	TSC_hg19_v1_chr12_-_54673880 L07515 S62077	62892	-	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC009385|LOC400043|400043|uncharacterized LOC400043##BC006821|CBX5|23468|chromobox homolog 5##NM_001127322|CBX5|23468|chromobox homolog 5##NM_001127321|CBX5|23468|chromobox homolog 5##L07515|CBX5|23468|chromobox homolog 5##S62077|CBX5|23468|chromobox homolog 5	0.050414	
chr15	67468209	67468342	reg1025369.p1	5.087	+	NM_001145104 AK300614 AK301348	-9779	+	AK298139 NM_001145103	-37917	+	NM_001145102 AK316017	-50152	+	AB528136 AM393020 AM393411 CR533540 CU691322 TSC_hg19_v1_chr15_-_67547000 AK021568 AL136715 BC058886 BC047026 BC035852 NM_024666	78745	-	TSC_hg19_v1_chr15_+_67547171 BC039463 NM_001031715 NM_022784 AY014282 AK292478 AK304303 BC031041 BC048964 BC039292 AK022538 CU690588	78899	+	TSC_hg19_v1_chr15_+_67813533 NM_001143936 AK294012 AY726587	345272	+	NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3##AK298139|SMAD3|4088|SMAD family member 3##NM_001145103|SMAD3|4088|SMAD family member 3##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3##AM393020|AAGAB|79719|alpha- and gamma-adaptin binding protein##AM393411|AAGAB|79719|alpha- and gamma-adaptin binding protein##CR533540|AAGAB|79719|alpha- and gamma-adaptin binding protein##AK021568|AAGAB|79719|alpha- and gamma-adaptin binding protein##AL136715|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC058886|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC047026|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC035852|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_024666|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC039463|IQCH|64799|IQ motif containing H##NM_001031715|IQCH|64799|IQ motif containing H##NM_022784|IQCH|64799|IQ motif containing H##AY014282|IQCH|64799|IQ motif containing H##AK292478|IQCH|64799|IQ motif containing H##AK304303|IQCH|64799|IQ motif containing H##BC031041|IQCH|64799|IQ motif containing H##BC048964|IQCH|64799|IQ motif containing H##BC039292|IQCH|64799|IQ motif containing H##AK022538|IQCH|64799|IQ motif containing H##NM_001143936|C15orf61|145853|chromosome 15 open reading frame 61##AK294012|C15orf61|145853|chromosome 15 open reading frame 61##AY726587|C15orf61|145853|chromosome 15 open reading frame 61	0.0	
chr16	12322728	12322824	reg1029398.p1	5.087	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-252203	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-263692	+	NM_001130007	-312258	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	574875	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	574943	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	672692	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr1	72053740	72053877	reg1030908.p1	5.087	+	NM_005455 NM_203350	-506837	-	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	-507101	-	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	-540429	-	TSC_hg19_v1_chr1_-_72748182 AK295481 BX538014 AK092307 AX747470 NM_173808	694403	-	TSC_hg19_v1_chr1_-_72748491 AY358132	694697	-	AK131476 BC020778 BX647210 TSC_hg19_v1_chr1_-_74663861 NM_001105659	2610040	-	NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK295481|NEGR1|257194|neuronal growth regulator 1##BX538014|NEGR1|257194|neuronal growth regulator 1##AK092307|NEGR1|257194|neuronal growth regulator 1##NM_173808|NEGR1|257194|neuronal growth regulator 1##AK131476|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BC020778|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BX647210|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001105659|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3	0.0	
chr17	66259571	66259666	reg1000984.p2	5.087	+	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	-4284	+	TSC_hg19_v1_chr17_+_66244233 AF208856	-15375	+	NM_001033569 NM_001033570 NM_001033571 NM_001033572 NM_001033574 NM_016627 TSC_hg19_v1_chr17_+_66244216 BC056271 BC050709	-15438	+	AX750577 AX750581 U79745 AK313121 AK290417 BC064832 NM_001174166 NM_004694	27712	-	AY691424 CU691786 TSC_hg19_v1_chr17_-_66453638 BC039867 AK301830 AK000917 NM_017983	193993	-	TSC_hg19_v1_chr17_+_66508140 NM_212471 Y07642	248505	+	AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G##NM_001033569|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033570|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033571|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033572|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033574|AMZ2|51321|archaelysin family metallopeptidase 2##NM_016627|AMZ2|51321|archaelysin family metallopeptidase 2##BC056271|AMZ2|51321|archaelysin family metallopeptidase 2##BC050709|AMZ2|51321|archaelysin family metallopeptidase 2##AX750581|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AY691424|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##BC039867|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK301830|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK000917|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_017983|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_212471|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##Y07642|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	0.0	
chr6	99968810	99968935	reg1028243.p1	5.087	+	TSC_hg19_v1_chr6_-_99963309 BC005991	-5562	-	TSC_hg19_v1_chr6_-_99963261 NM_001080481 AK310643	-5603	-	BC019074 AJ420570 BC064640 TSC_hg19_v1_chr6_-_99873180 BC042850 BX648520 BC007791 AF314186 BC052638 BC064413 AK027759 BC012780 BC107700 AK027898 AK027658 AK074628 NM_015491 NM_032870	-95705	-	TSC_hg19_v1_chr6_+_99968921 BX647075 NM_001195131	27	+	CU679631 CU691126 AB528579 AB125137 BC050726 TSC_hg19_v1_chr6_-_100016505 AK223247 M74091 AK291914 AK222768 BC026272 BC030159 BC056153	47585	-	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	47731	-	BC005991|USP45|85015|ubiquitin specific peptidase 45##NM_001080481|USP45|85015|ubiquitin specific peptidase 45##AK310643|USP45|85015|ubiquitin specific peptidase 45##BC019074|PNISR|25957|PNN-interacting serine/arginine-rich protein##AJ420570|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC064640|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC042850|PNISR|25957|PNN-interacting serine/arginine-rich protein##BX648520|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC007791|PNISR|25957|PNN-interacting serine/arginine-rich protein##AF314186|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC052638|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC064413|PNISR|25957|PNN-interacting serine/arginine-rich protein##AK027759|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC012780|PNISR|25957|PNN-interacting serine/arginine-rich protein##BC107700|PNISR|25957|PNN-interacting serine/arginine-rich protein##AK027898|PNISR|25957|PNN-interacting serine/arginine-rich protein##AK027658|PNISR|25957|PNN-interacting serine/arginine-rich protein##AK074628|PNISR|25957|PNN-interacting serine/arginine-rich protein##NM_015491|PNISR|25957|PNN-interacting serine/arginine-rich protein##NM_032870|PNISR|25957|PNN-interacting serine/arginine-rich protein##BX647075|LOC100130890|100130890|uncharacterized LOC100130890##NM_001195131|LOC100130890|100130890|uncharacterized LOC100130890##AB125137|CCNC|892|cyclin C##BC050726|CCNC|892|cyclin C##AK223247|CCNC|892|cyclin C##M74091|CCNC|892|cyclin C##AK291914|CCNC|892|cyclin C##AK222768|CCNC|892|cyclin C##BC026272|CCNC|892|cyclin C##BC030159|CCNC|892|cyclin C##BC056153|CCNC|892|cyclin C##BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C	0.0	
chr7	105172493	105172674	reg1029778.p2	5.087	+	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	-9922	-	TSC_hg19_v1_chr7_-_105029346 NM_182692	-143241	-	TSC_hg19_v1_chr7_-_105029265 AB489157	-143318	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	63	+	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	49352	-	AK300338 NM_138495	147025	-	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_182692|SRPK2|6733|SRSF protein kinase 2##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1	0.137861	
chr9	138495856	138495959	reg1026718.p1	5.087	+	AK311730 AK304657 AK309965 AK309983 AK311007 AK311731 AK311813 J04129 NM_001018049 NM_002571 M61886 AL050169 BC069451 BC069562 AB528962 HQ258098 CU686906 BC112304 BC113728 DQ884407	-42284	+	AJ251021 AJ251022 AJ251023 AJ251024 NM_014582 BC143803 BC069563 AM087898	-57881	+	M90424 NM_001252617 NM_001252618 NM_001252619 NM_002297 BC065721 X67647 BC074925 BC074926 X62418	-82601	+	AY336054 NM_182974	35478	-	AB463839 AY301270 NM_001001676	59260	+	AY884306 AY902244 BC031861 NM_001012415 NM_001101677	95438	-	AK311730|PAEP|5047|progestagen-associated endometrial protein##AK304657|PAEP|5047|progestagen-associated endometrial protein##AK309983|PAEP|5047|progestagen-associated endometrial protein##AK311007|PAEP|5047|progestagen-associated endometrial protein##AK311813|PAEP|5047|progestagen-associated endometrial protein##J04129|PAEP|5047|progestagen-associated endometrial protein##NM_001018049|PAEP|5047|progestagen-associated endometrial protein##NM_002571|PAEP|5047|progestagen-associated endometrial protein##M61886|PAEP|5047|progestagen-associated endometrial protein##BC069451|PAEP|5047|progestagen-associated endometrial protein##BC069562|PAEP|5047|progestagen-associated endometrial protein##HQ258098|PAEP|5047|progestagen-associated endometrial protein##BC112304|PAEP|5047|progestagen-associated endometrial protein##BC113728|PAEP|5047|progestagen-associated endometrial protein##DQ884407|PAEP|5047|progestagen-associated endometrial protein##AJ251021|OBP2A|29991|odorant binding protein 2A##AJ251022|OBP2A|29991|odorant binding protein 2A##AJ251023|OBP2A|29991|odorant binding protein 2A##AJ251024|OBP2A|29991|odorant binding protein 2A##NM_014582|OBP2A|29991|odorant binding protein 2A##BC069563|OBP2A|29991|odorant binding protein 2A##AM087898|OBP2A|29991|odorant binding protein 2A##M90424|LCN1|3933|lipocalin 1##NM_001252617|LCN1|3933|lipocalin 1##NM_001252618|LCN1|3933|lipocalin 1##NM_001252619|LCN1|3933|lipocalin 1##NM_002297|LCN1|3933|lipocalin 1##BC065721|LCN1|3933|lipocalin 1##X67647|LCN1|3933|lipocalin 1##BC074925|LCN1|3933|lipocalin 1##BC074926|LCN1|3933|lipocalin 1##X62418|LCN1|3933|lipocalin 1##AY336054|GLT6D1|360203|glycosyltransferase 6 domain containing 1##NM_182974|GLT6D1|360203|glycosyltransferase 6 domain containing 1##AY301270|LCN9|392399|lipocalin 9##NM_001001676|LCN9|392399|lipocalin 9##AY884306|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##AY902244|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##BC031861|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##NM_001012415|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1##NM_001101677|SOHLH1|402381|spermatogenesis and oogenesis specific basic helix-loop-helix 1	0.987732	CTCF.p2:9:0.988
chr11	35187733	35187891	reg1023087.p3	5.086	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-26952	+	TSC_hg19_v1_chr11_+_35160821 M59040	-26994	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	-27078	+	TSC_hg19_v1_chr11_+_35198199 AK129808	10400	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	91013	-	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	252899	-	AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##AK129808|CD44|960|CD44 molecule (Indian blood group)##CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.0	
chr17	64621497	64621625	reg1027396.p1	5.086	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	-322634	+	TSC_hg19_v1_chr17_+_64298733 BC053321	-322811	+	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	-396036	-	AK290171 TSC_hg19_v1_chr17_+_64831234	209674	+	BC101633 NM_145811 BC101607 AF361351 AF458898	251859	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	339328	+	NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##BC053321|PRKCA|5578|protein kinase C, alpha##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	0.324743	CTCF.p2:12:0.325
chr17_ctg5_hap1	66144	66261	reg1028017.p2	5.086	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr20	49017081	49017221	reg1025485.p1	5.086	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	-209521	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	-209770	+	NM_005194 TSC_hg19_v1_chr20_+_48807197	-209958	+	TSC_hg19_v1_chr20_+_49126895 AK290638 NM_002827	109725	+	TSC_hg19_v1_chr20_+_49126916 AK316563	109762	+	AK299830 TSC_hg19_v1_chr20_+_49126919	109768	+	EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK290638|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##NM_002827|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK316563|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1	0.93188	CTCF.p2:-24:0.932
chr20	57630460	57630569	reg1028022.p1	5.086	+	TSC_hg19_v1_chr20_-_57617873 AK314449 AK002157 BC010649 BC013969 AF151865 AK298135 NM_016045	-12646	-	BT007293 TSC_hg19_v1_chr20_-_57607361 BC003671 BC001690 AK315493 AK026556 AF077045 AF052955 BC105811 NM_006886	-23151	-	AJ292757 NM_030773	-36206	+	NM_178457	135560	+	BC008876 TSC_hg19_v1_chr20_+_57875490 BC053866 NM_000114 NM_207032 NM_207033 NM_207034	244975	+	TSC_hg19_v1_chr20_+_57875665 J05081 X52001 AB590897 CU679163 BT007085 DQ096281	245243	+	AK314449|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK002157|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC010649|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC013969|SLMO2|51012|slowmo homolog 2 (Drosophila)##AF151865|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK298135|SLMO2|51012|slowmo homolog 2 (Drosophila)##NM_016045|SLMO2|51012|slowmo homolog 2 (Drosophila)##BT007293|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC003671|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC001690|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK315493|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK026556|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF077045|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF052955|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC105811|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##NM_006886|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AJ292757|TUBB1|81027|tubulin, beta 1 class VI##NM_030773|TUBB1|81027|tubulin, beta 1 class VI##NM_178457|ZNF831|128611|zinc finger protein 831##BC008876|EDN3|1908|endothelin 3##BC053866|EDN3|1908|endothelin 3##NM_000114|EDN3|1908|endothelin 3##NM_207032|EDN3|1908|endothelin 3##NM_207033|EDN3|1908|endothelin 3##NM_207034|EDN3|1908|endothelin 3##J05081|EDN3|1908|endothelin 3##X52001|EDN3|1908|endothelin 3##BT007085|EDN3|1908|endothelin 3##DQ096281|EDN3|1908|endothelin 3	0.382205	CTCF.p2:10:0.382
chr22	24503146	24503246	reg1025789.p2	5.086	+	TSC_hg19_v1_chr22_+_24407870 AB002328 BC041659	-95301	+	TSC_hg19_v1_chr22_+_24407863 NM_001199281 BC013099 BC028969	-95356	+	TSC_hg19_v1_chr22_+_24407753 AF072441 NM_001201429 NM_012295 AK307522 BC054497	-95421	+	TSC_hg19_v1_chr22_+_24551954 AL390166	48761	+	TSC_hg19_v1_chr22_+_24577424 AK026431	74231	+	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	74248	+	AB002328|CABIN1|23523|calcineurin binding protein 1##BC041659|CABIN1|23523|calcineurin binding protein 1##NM_001199281|CABIN1|23523|calcineurin binding protein 1##BC013099|CABIN1|23523|calcineurin binding protein 1##BC028969|CABIN1|23523|calcineurin binding protein 1##AF072441|CABIN1|23523|calcineurin binding protein 1##NM_001201429|CABIN1|23523|calcineurin binding protein 1##NM_012295|CABIN1|23523|calcineurin binding protein 1##AK307522|CABIN1|23523|calcineurin binding protein 1##BC054497|CABIN1|23523|calcineurin binding protein 1##AL390166|CABIN1|23523|calcineurin binding protein 1##AK026431|SUSD2|56241|sushi domain containing 2##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2	0.997642	CTCF.p2:-15:0.998
chr2	238595368	238595456	reg1027011.p1	5.086	+	TSC_hg19_v1_chr2_+_238536229 NM_001137550 AF115510	-59053	+	BC023661 AK225423 AK022600 NM_022449	-95672	-	TSC_hg19_v1_chr2_-_238499327 BC009827 BC050426 AL136645	-96066	-	TSC_hg19_v1_chr2_+_238600798 BC018883 BC019335 NM_001137551 NM_001137552 NM_001137553 NM_004735	5395	+	TSC_hg19_v1_chr2_+_238600975 AJ223075 BC001385 AK298270 U69609 BC108913 BC108914 AK307485	5531	+	TSC_hg19_v1_chr2_+_238601052 EU832771 EU832772 GQ129315 GQ129316	5663	+	NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC023661|RAB17|64284|RAB17, member RAS oncogene family##AK225423|RAB17|64284|RAB17, member RAS oncogene family##AK022600|RAB17|64284|RAB17, member RAS oncogene family##NM_022449|RAB17|64284|RAB17, member RAS oncogene family##BC009827|RAB17|64284|RAB17, member RAS oncogene family##BC050426|RAB17|64284|RAB17, member RAS oncogene family##AL136645|RAB17|64284|RAB17, member RAS oncogene family##BC018883|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC019335|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137551|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137552|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137553|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_004735|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AJ223075|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC001385|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK298270|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##U69609|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108913|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108914|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK307485|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##EU832771|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##EU832772|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129315|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129316|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	0.0	
chr3	31592293	31592420	reg1027305.p2	5.086	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	-17874	+	TSC_hg19_v1_chr3_+_31574468 AK074587	-17907	+	TSC_hg19_v1_chr3_+_31574119 AK311488	-18226	+	TSC_hg19_v1_chr3_-_32022751 BC003168 AF346291 AK304067 AK097503	430413	-	AK294003 NM_001137674	430909	+	AF392451 NM_001174060 NM_017784	430933	-	AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##BC003168|OSBPL10|114884|oxysterol binding protein-like 10##AF346291|OSBPL10|114884|oxysterol binding protein-like 10##AK304067|OSBPL10|114884|oxysterol binding protein-like 10##AK294003|ZNF860|344787|zinc finger protein 860##NM_001137674|ZNF860|344787|zinc finger protein 860##AF392451|OSBPL10|114884|oxysterol binding protein-like 10##NM_001174060|OSBPL10|114884|oxysterol binding protein-like 10##NM_017784|OSBPL10|114884|oxysterol binding protein-like 10	0.997878	CTCF.p2:7:0.998
chr4	2933604	2933784	reg1021248.p1	5.086	+	AK025413 TSC_hg19_v1_chr4_+_2883766	-49993	+	TSC_hg19_v1_chr4_+_2845627 AH004561 S70310 BC013393 AK309186	-88028	+	TSC_hg19_v1_chr4_+_2845589 NM_001119 NM_014189 NM_014190 NM_176801	-88115	+	CU677155 EU176393 EU176739 L11669 TSC_hg19_v1_chr4_-_2935840	2053	-	TSC_hg19_v1_chr4_-_2935854 NM_001120	2213	-	TSC_hg19_v1_chr4_-_2936515 BC001502 BC014979	2793	-	AK025413|ADD1|118|adducin 1 (alpha)##S70310|ADD1|118|adducin 1 (alpha)##BC013393|ADD1|118|adducin 1 (alpha)##AK309186|ADD1|118|adducin 1 (alpha)##NM_001119|ADD1|118|adducin 1 (alpha)##NM_014189|ADD1|118|adducin 1 (alpha)##NM_014190|ADD1|118|adducin 1 (alpha)##NM_176801|ADD1|118|adducin 1 (alpha)##EU176393|MFSD10|10227|major facilitator superfamily domain containing 10##EU176739|MFSD10|10227|major facilitator superfamily domain containing 10##L11669|MFSD10|10227|major facilitator superfamily domain containing 10##NM_001120|MFSD10|10227|major facilitator superfamily domain containing 10##BC001502|MFSD10|10227|major facilitator superfamily domain containing 10##BC014979|MFSD10|10227|major facilitator superfamily domain containing 10	0.01433	
chr4	2956631	2956812	reg1027429.p1	5.086	+	TSC_hg19_v1_chr4_+_2936642 AK054619 BC020978 BC032331 BC041605	-20067	+	TSC_hg19_v1_chr4_-_2936577 NM_001146069	-20146	-	TSC_hg19_v1_chr4_-_2936515 BC001502 BC014979	-20234	-	TSC_hg19_v1_chr4_-_2965083 CU693114 BC026035	8342	-	TSC_hg19_v1_chr4_-_2965091 AF040965	8377	-	BC053635 TSC_hg19_v1_chr4_-_2965134 BC017358 NM_003703	8402	-	BC020978|C4orf10|317648|chromosome 4 open reading frame 10##BC041605|C4orf10|317648|chromosome 4 open reading frame 10##NM_001146069|MFSD10|10227|major facilitator superfamily domain containing 10##BC001502|MFSD10|10227|major facilitator superfamily domain containing 10##BC014979|MFSD10|10227|major facilitator superfamily domain containing 10##BC026035|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##AF040965|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC053635|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC017358|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##NM_003703|NOP14|8602|NOP14 nucleolar protein homolog (yeast)	0.0	
chr1	225629366	225629468	reg1026699.p1	5.085	+	NM_194442	-12861	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	-13616	-	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	-13688	-	AF519769 TSC_hg19_v1_chr1_-_225840803 AY345143 AK290179 BC095481 NM_001008493 NM_018212	211370	-	NM_001130440 NM_003133 TSC_hg19_v1_chr1_+_225965547 BC066957 BC008443 EF488978 AF070649 BC021995 BC106005 U20998 BC015094 AK289595 BC022415 BC045603	336115	+	TSC_hg19_v1_chr1_+_225965556 BC064351 AL050363 BC067845	336153	+	NM_194442|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##AF519769|ENAH|55740|enabled homolog (Drosophila)##AY345143|ENAH|55740|enabled homolog (Drosophila)##AK290179|ENAH|55740|enabled homolog (Drosophila)##BC095481|ENAH|55740|enabled homolog (Drosophila)##NM_001008493|ENAH|55740|enabled homolog (Drosophila)##NM_018212|ENAH|55740|enabled homolog (Drosophila)##NM_001130440|SRP9|6726|signal recognition particle 9kDa##NM_003133|SRP9|6726|signal recognition particle 9kDa##BC066957|SRP9|6726|signal recognition particle 9kDa##BC008443|SRP9|6726|signal recognition particle 9kDa##EF488978|SRP9|6726|signal recognition particle 9kDa##AF070649|SRP9|6726|signal recognition particle 9kDa##BC021995|SRP9|6726|signal recognition particle 9kDa##BC106005|SRP9|6726|signal recognition particle 9kDa##U20998|SRP9|6726|signal recognition particle 9kDa##BC015094|SRP9|6726|signal recognition particle 9kDa##AK289595|SRP9|6726|signal recognition particle 9kDa##BC022415|SRP9|6726|signal recognition particle 9kDa##BC064351|SRP9|6726|signal recognition particle 9kDa##AL050363|SRP9|6726|signal recognition particle 9kDa##BC067845|SRP9|6726|signal recognition particle 9kDa	0.943568	CTCF.p2:-5:0.944
chr12	52533428	52533548	reg1027467.p1	5.085	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	-69690	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	-69734	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	-88272	+	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	52256	-	BC117348 BC126393 BC038743 NM_001242696	71075	-	NM_005556 TSC_hg19_v1_chr12_+_52626966	93474	+	BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80##BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##NM_005556|KRT7|3855|keratin 7	0.2942	CTCF.p2:-2:0.248
chr13	99492521	99492611	reg1025590.p1	5.085	+	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	-87661	-	TSC_hg19_v1_chr13_-_99229363 BC035578 BC065378 NM_001032296	-263255	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	-263444	-	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	137724	-	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	246125	-	AK290342 NM_001144072	360112	+	BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC035578|STK24|8428|serine/threonine kinase 24##BC065378|STK24|8428|serine/threonine kinase 24##NM_001032296|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24##AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9##AK290342|UBAC2|337867|UBA domain containing 2##NM_001144072|UBAC2|337867|UBA domain containing 2	0.891194	CTCF.p2:-6:0.891
chr2	242801969	242802148	reg1026329.p2	5.085	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	-1034	-	AK091038 AX746745 NM_001167599 NM_001167602 NM_080741 BC012899	-50008	+	TSC_hg19_v1_chr2_+_242750289 AK289421 AK300969 AK025617 AK096992 AK298403 AY203952	-51764	+	AK090909 AX746675 BC113517 BC113519 NM_173821	9824	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	228801	+	None	None	None	AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1##AK091038|NEU4|129807|sialidase 4##NM_001167599|NEU4|129807|sialidase 4##NM_001167602|NEU4|129807|sialidase 4##NM_080741|NEU4|129807|sialidase 4##BC012899|NEU4|129807|sialidase 4##AK289421|NEU4|129807|sialidase 4##AK300969|NEU4|129807|sialidase 4##AK025617|NEU4|129807|sialidase 4##AK096992|NEU4|129807|sialidase 4##AK298403|NEU4|129807|sialidase 4##AY203952|NEU4|129807|sialidase 4##AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AK298283|LOC728323|728323|uncharacterized LOC728323	0.0	
chr5	159895242	159895401	reg1026541.p3	5.085	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-46418	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-46467	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-49216	-	AK025130 TSC_hg19_v1_chr5_-_160112393	217018	-	AB018258 AK295081 AK090832 AX746642 NM_025153	383810	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	1079805	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.0	
chr5	35777961	35778080	reg1008493.p2	5.085	+	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	-160011	+	NM_000949	-547198	-	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	-547443	-	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	79013	+	NM_001042625 BC017586 NM_144647	160788	-	CU686633 BC068446 AK308046 AK290809 AK057066 AK303770 AK315851 AK296136 NM_152404	213418	-	BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##NM_000949|PRLR|5618|prolactin receptor##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like##BC068446|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK308046|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK290809|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK057066|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK303770|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK315851|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK296136|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_152404|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	0.010573	
chr12	2849151	2849247	reg1026164.p1	5.084	+	AB209016 AJ224873 AY830711 AY830712 AY830713 Z34809 Z34810 Z34811 Z34812 Z34813 Z34814 Z34815 Z34816 Z34817 Z34818 Z34819 Z34820 Z34821 Z34822 Z74996 TSC_hg19_v1_chr12_+_2162753	-686471	+	TSC_hg19_v1_chr12_+_2162452 NM_000719 NM_001129827 NM_001129829 NM_001129830 NM_001129831 NM_001129832 NM_001129833 NM_001129834 NM_001129835 NM_001129836 NM_001129837 NM_001129838 NM_001129839 NM_001129840 NM_001129841 NM_001129842 NM_001129843 NM_001129844 NM_001129846 NM_001167623 NM_001167624 NM_001167625 NM_199460 AK309111 AF465484 AK308652 BC146846	-686705	+	TSC_hg19_v1_chr12_-_2113622 AB463561 AK301109 AK056200 AK299203 BC043437 AY146652 NM_152640	-735528	-	TSC_hg19_v1_chr12_+_2904161 NM_002014 AK313918 BC001786 M88279 BC007924	54955	+	TSC_hg19_v1_chr12_+_2904310 AB385011 CU674888 DQ893668 DQ895800	55103	+	NM_018463 TSC_hg19_v1_chr12_+_2921842 AK130319 AK297189 AK291110 AK300905 AK027483 BC006552 BC013399 DQ892711 DQ895963 CU675449 AY599883	72657	+	AB209016|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AJ224873|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830711|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830712|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830713|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34809|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34810|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34811|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34812|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34813|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34814|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34815|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34816|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34817|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34818|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34819|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34820|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34821|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34822|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z74996|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK301109|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK056200|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK299203|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC043437|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AY146652|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_152640|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_002014|FKBP4|2288|FK506 binding protein 4, 59kDa##AK313918|FKBP4|2288|FK506 binding protein 4, 59kDa##BC001786|FKBP4|2288|FK506 binding protein 4, 59kDa##M88279|FKBP4|2288|FK506 binding protein 4, 59kDa##BC007924|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ893668|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ895800|FKBP4|2288|FK506 binding protein 4, 59kDa##NM_018463|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK130319|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK297189|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK291110|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK300905|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK027483|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC006552|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC013399|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ892711|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ895963|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AY599883|ITFG2|55846|integrin alpha FG-GAP repeat containing 2	0.996681	CTCF.p2:-21:0.997
chr1	234978835	234978972	reg1025309.p1	5.084	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-83129	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-233657	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-235045	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	313186	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	313328	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	345660	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr12	54528832	54528962	reg1025576.p1	5.084	+	TSC_hg19_v1_chr12_+_54519846 BC009385	-9039	+	BC050442 NM_153633 AB464580 CU690682 EU446482	-81214	+	NM_018953 AB463752	-102031	+	BC030212 TSC_hg19_v1_chr12_-_54541132	12184	-	BC088352 BC000417 TSC_hg19_v1_chr12_-_54582755 AK091468 AX747003 NM_001243789 NM_001243790 BC105607 AK001789 AK001235 AK222473 AK290274 NM_001243787 NM_001243788 NM_001243791 NM_014311	53789	-	BC006821 NM_001127322 TSC_hg19_v1_chr12_-_54653330	124427	-	BC009385|LOC400043|400043|uncharacterized LOC400043##BC050442|HOXC4|3221|homeobox C4##NM_153633|HOXC4|3221|homeobox C4##EU446482|HOXC6|3223|homeobox C6##NM_018953|HOXC5|3222|homeobox C5##BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC006821|CBX5|23468|chromobox homolog 5##NM_001127322|CBX5|23468|chromobox homolog 5	0.0	
chr2	68478305	68478446	reg1025331.p2	5.084	+	TSC_hg19_v1_chr2_+_68384999 BC008304 NM_020143 AK291715 AF349314 AF164799 AK313204 AK223118 L48692 AK225641 BC018152	-93278	+	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	-93741	-	NM_001190263 NM_001190265 NM_006333 NM_173177 TSC_hg19_v1_chr2_-_68290160	-188215	-	TSC_hg19_v1_chr2_-_68479665 AK307136 AK314893 BC027913 NM_000945	1220	-	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	68725	-	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	113997	+	BC008304|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_020143|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK291715|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF349314|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF164799|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK313204|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK223118|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK225641|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##BC018152|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92##NM_001190263|C1D|10438|C1D nuclear receptor corepressor##NM_001190265|C1D|10438|C1D nuclear receptor corepressor##NM_006333|C1D|10438|C1D nuclear receptor corepressor##NM_173177|C1D|10438|C1D nuclear receptor corepressor##AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin	0.0	
chr3	186857532	186857713	reg1027038.p2	5.084	+	TSC_hg19_v1_chr3_-_186857285 L05096 AB063610 BC012328 NM_052969	-366	-	AK292879 BC040009 NM_003032 X62822 BC031476 L11720 X54363	-117950	+	U67847 TSC_hg19_v1_chr3_+_186714361	-143274	+	BC065202 NM_153708 BC034744 DQ890807 DQ893962 AY562235	57720	+	BC106945 BC106946 TSC_hg19_v1_chr3_-_187009489 AK291686 AK129893 AK304334 AK300663 BX647237 AK291157 CR749615 BC039724 NM_001031849 NM_001879 NM_139125	152017	-	BC013161 NM_022147 AJ251832 AY562238 DQ891046 DQ894225	228576	+	L05096|RPL39L|116832|ribosomal protein L39-like##AB063610|RPL39L|116832|ribosomal protein L39-like##BC012328|RPL39L|116832|ribosomal protein L39-like##NM_052969|RPL39L|116832|ribosomal protein L39-like##AK292879|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC040009|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##NM_003032|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X62822|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC031476|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##L11720|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##X54363|ST6GAL1|6480|ST6 beta-galactosamide alpha-2,6-sialyltranferase 1##BC065202|RTP1|132112|receptor (chemosensory) transporter protein 1##NM_153708|RTP1|132112|receptor (chemosensory) transporter protein 1##BC034744|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ890807|RTP1|132112|receptor (chemosensory) transporter protein 1##DQ893962|RTP1|132112|receptor (chemosensory) transporter protein 1##AY562235|RTP1|132112|receptor (chemosensory) transporter protein 1##BC106945|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC106946|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291686|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK129893|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK304334|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK300663|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BX647237|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##AK291157|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##CR749615|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC039724|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001031849|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_001879|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##NM_139125|MASP1|5648|mannan-binding lectin serine peptidase 1 (C4/C2 activating component of Ra-reactive factor)##BC013161|RTP4|64108|receptor (chemosensory) transporter protein 4##NM_022147|RTP4|64108|receptor (chemosensory) transporter protein 4##AJ251832|RTP4|64108|receptor (chemosensory) transporter protein 4##AY562238|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ891046|RTP4|64108|receptor (chemosensory) transporter protein 4##DQ894225|RTP4|64108|receptor (chemosensory) transporter protein 4	0.992433	CTCF.p2:4:0.992
chr4	103184328	103184461	reg1032427.p1	5.084	+	NM_001083907 TSC_hg19_v1_chr4_+_102734998 AK000713	-449386	+	TSC_hg19_v1_chr4_+_102711886 BC032241 AK292133 AL834291 EU051376 AB587395	-472459	+	NM_001127507 NM_017935 TSC_hg19_v1_chr4_+_102711808	-472598	+	AK027652 NM_001135148	61074	-	CU680230 DQ892212 DQ895407 TSC_hg19_v1_chr4_-_103265863	81474	-	TSC_hg19_v1_chr4_-_103266365 AB040120 NM_022154 AK304274	81932	-	NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##BC032241|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK292133|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AL834291|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##EU051376|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_001127507|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_017935|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK027652|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_001135148|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##DQ892212|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##DQ895407|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##AB040120|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_022154|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##AK304274|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	0.998041	CTCF.p2:-5:0.998
chr17	46413495	46413675	reg1006971.p2	5.083	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-228433	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-228600	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-234764	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	93953	-	TSC_hg19_v1_chr17_-_46507604 BC039040	94032	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	194686	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.0	
chr5	115911838	115911907	reg1012556.p1	5.083	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-1358	-	TSC_hg19_v1_chr5_+_115898220 D28352	-13648	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-491151	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2412366	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2494939	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2495293	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.659154	
chr7	89744453	89744598	reg1028740.p1	5.083	+	BC028365 NM_152706	-1319495	-	BC140826 BC140829 AK056672 AY295769 NM_181646	-1355809	+	BC020600 AF423422 AF423423 AK026806 AK307644 TSC_hg19_v1_chr7_-_87936207 NM_001205315 NM_001205316 NM_024636	-1808311	-	NM_012449 TSC_hg19_v1_chr7_+_89783782 AK308452 BC011802	39212	+	AK304076 TSC_hg19_v1_chr7_+_89783791 AF186249	39287	+	AF455138 NM_001244944 NM_001244945 NM_152999 AK092666 AX747660 TSC_hg19_v1_chr7_+_89841171 AY008443 AY008444 AY008445 NM_001040665 NM_001244946 AK315043	96590	+	BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62##BC140826|ZNF804B|219578|zinc finger protein 804B##BC140829|ZNF804B|219578|zinc finger protein 804B##AK056672|ZNF804B|219578|zinc finger protein 804B##AY295769|ZNF804B|219578|zinc finger protein 804B##NM_181646|ZNF804B|219578|zinc finger protein 804B##BC020600|STEAP4|79689|STEAP family member 4##AF423422|STEAP4|79689|STEAP family member 4##AF423423|STEAP4|79689|STEAP family member 4##AK026806|STEAP4|79689|STEAP family member 4##AK307644|STEAP4|79689|STEAP family member 4##NM_001205315|STEAP4|79689|STEAP family member 4##NM_001205316|STEAP4|79689|STEAP family member 4##NM_024636|STEAP4|79689|STEAP family member 4##NM_012449|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK308452|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC011802|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK304076|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF186249|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF455138|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244944|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244945|STEAP2|261729|STEAP family member 2, metalloreductase##NM_152999|STEAP2|261729|STEAP family member 2, metalloreductase##AK092666|STEAP2|261729|STEAP family member 2, metalloreductase##AY008443|STEAP2|261729|STEAP family member 2, metalloreductase##AY008444|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040665|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244946|STEAP2|261729|STEAP family member 2, metalloreductase##AK315043|STEAP2|261729|STEAP family member 2, metalloreductase	0.998077	CTCF.p2:-12:0.998
chr8	103446982	103447107	reg1027216.p1	5.083	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-22133	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-195871	-	NM_001040630	-309910	-	NM_024410 AK315276 BC104456 BC104457	116817	+	BC011538 NM_001032282 S81439	219048	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	220888	-	AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001040630|NCALD|83988|neurocalcin delta##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10	0.90676	CTCF.p2:6:0.907
chrX	128741174	128741254	reg1008768.p2	5.083	+	TSC_hg19_v1_chrX_+_128674247 AK226116 BC094726 NM_000276 NM_001587 U57627 AK293107 BC130612 BC144106 BC025253 AB384825	-66916	+	TSC_hg19_v1_chrX_-_128657468 NM_003069 NM_139035	-83752	-	EU636009 TSC_hg19_v1_chrX_-_128657443	-83770	-	BC021104 NM_017413	47708	-	AK300954 U90724 NM_003399 BC126174 BC143901	131762	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	172673	+	AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe##U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe##AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_003069|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_139035|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##EU636009|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC021104|APLN|8862|apelin##NM_017413|APLN|8862|apelin##AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3	0.984539	
chr10	73404208	73404389	reg1023509.p2	5.082	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	-247560	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-325252	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-325273	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	75294	-	AK074172 NM_001168390	93282	-	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	129008	-	BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54	0.0	
chr5	89267204	89267299	reg1030326.p1	5.082	+	AL833268 AL833274 NM_001131005 NM_001193347	-1067357	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1081987	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-1082131	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	438288	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	502931	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	503327	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.020285	
chr6	28104607	28104721	reg1022339.p2	5.082	+	TSC_hg19_v1_chr6_-_28104623 AK309286 BC043177	-66	-	AK025844 AK294017 AK309837 NM_025231 TSC_hg19_v1_chr6_+_28092406 BC004255	-12265	+	NM_003447	-56183	+	TSC_hg19_v1_chr6_+_28109660 AB208793 BC096282 BC096283 BC096284 BC130032 NM_006298 U57796	5027	+	AK292767 BC050562 BC015543 BC039027 TSC_hg19_v1_chr6_-_28186889	82112	-	NM_001199479 NM_001199480 NM_006299 AK304013 BC010374 TSC_hg19_v1_chr6_+_28193073 AK226035 AY261373 U62392	88408	+	AK309286|LOC100129195|100129195|uncharacterized LOC100129195##BC043177|LOC100129195|100129195|uncharacterized LOC100129195##AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16##NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16##BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16##NM_003447|ZNF165|7718|zinc finger protein 165##AB208793|ZNF192|7745|zinc finger protein 192##BC096282|ZNF192|7745|zinc finger protein 192##BC096283|ZNF192|7745|zinc finger protein 192##BC096284|ZNF192|7745|zinc finger protein 192##BC130032|ZNF192|7745|zinc finger protein 192##NM_006298|ZNF192|7745|zinc finger protein 192##U57796|ZNF192|7745|zinc finger protein 192##AK292767|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC050562|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC015543|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC039027|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##NM_001199479|ZNF193|7746|zinc finger protein 193##NM_001199480|ZNF193|7746|zinc finger protein 193##NM_006299|ZNF193|7746|zinc finger protein 193##AK304013|ZNF193|7746|zinc finger protein 193##BC010374|ZNF193|7746|zinc finger protein 193##AK226035|ZNF193|7746|zinc finger protein 193##AY261373|ZNF193|7746|zinc finger protein 193##U62392|ZNF193|7746|zinc finger protein 193	0.0	
chr7	148936598	148936704	reg1025055.p1	5.082	+	D30612 TSC_hg19_v1_chr7_+_148892683 NM_003575 AK299280 BC073805 AK316282 AB587508 BC055287 BC041704	-43962	+	TSC_hg19_v1_chr7_+_148844772 AY049744 AB527270 CU692152	-91892	+	TSC_hg19_v1_chr7_+_148844532 AK026380 NM_170686 BC043295 AK290499	-92122	+	TSC_hg19_v1_chr7_+_148936741 AK074821 NM_012256 BC022785 EU446738 CU692712	143	+	TSC_hg19_v1_chr7_+_148959286 AK131504 NM_001195220 BC131569 AB528912	22669	+	AK098351 AK310453 AK310396 TSC_hg19_v1_chr7_+_148982401 AK303492	45735	+	D30612|ZNF282|8427|zinc finger protein 282##NM_003575|ZNF282|8427|zinc finger protein 282##AK299280|ZNF282|8427|zinc finger protein 282##BC073805|ZNF282|8427|zinc finger protein 282##AK316282|ZNF282|8427|zinc finger protein 282##BC055287|ZNF282|8427|zinc finger protein 282##BC041704|ZNF282|8427|zinc finger protein 282##AY049744|ZNF398|57541|zinc finger protein 398##AK026380|ZNF398|57541|zinc finger protein 398##NM_170686|ZNF398|57541|zinc finger protein 398##BC043295|ZNF398|57541|zinc finger protein 398##AK290499|ZNF398|57541|zinc finger protein 398##AK074821|ZNF212|7988|zinc finger protein 212##NM_012256|ZNF212|7988|zinc finger protein 212##BC022785|ZNF212|7988|zinc finger protein 212##EU446738|ZNF212|7988|zinc finger protein 212##NM_001195220|ZNF783|100289678|zinc finger family member 783##AK098351|LOC155060|155060|AI894139 pseudogene##AK310453|LOC155060|155060|AI894139 pseudogene##AK310396|LOC155060|155060|AI894139 pseudogene##AK303492|LOC155060|155060|AI894139 pseudogene	0.029275	
chr8	136580199	136580320	reg1027897.p1	5.082	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-110058	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-110601	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-854985	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2928847	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	3345985	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	4135023	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.540811	CTCF.p2:-14:0.541
chr17	65590274	65590429	reg1026799.p1	5.081	+	BC007905 NM_012417 NM_181671	-216428	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-216763	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-216942	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	123699	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	231351	+	AK293224 TSC_hg19_v1_chr17_+_65822221	231866	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.0	
chr9	21318695	21318828	reg1004973.p2	5.081	+	BC093755 BC093757 NM_002169	-13450	-	BC104159 BC104160 BC074956 NM_002172 V00542	-78779	-	M71246 BC096732 BC098355 M11026 NM_021268 M38289	-90539	-	BX538121 BC064958 TSC_hg19_v1_chr9_-_21335388 AB037775 AL713669 BC039133 AK091715 AY172949 NM_018847	16572	-	AB590746 BC069471 BC096697 BC096710 BC096730 BC098357 NM_021002	32124	-	AB464595 CU686802 HQ258738 JN848523 BC093988 BC112002 BC069427 NM_006900	49278	-	BC093755|IFNA5|3442|interferon, alpha 5##BC093757|IFNA5|3442|interferon, alpha 5##NM_002169|IFNA5|3442|interferon, alpha 5##BC104159|IFNA14|3448|interferon, alpha 14##BC104160|IFNA14|3448|interferon, alpha 14##BC074956|IFNA14|3448|interferon, alpha 14##NM_002172|IFNA14|3448|interferon, alpha 14##V00542|IFNA14|3448|interferon, alpha 14##M71246|IFNA17|3451|interferon, alpha 17##BC096732|IFNA17|3451|interferon, alpha 17##BC098355|IFNA17|3451|interferon, alpha 17##M11026|IFNA17|3451|interferon, alpha 17##NM_021268|IFNA17|3451|interferon, alpha 17##M38289|IFNA17|3451|interferon, alpha 17##BX538121|KLHL9|55958|kelch-like 9 (Drosophila)##BC064958|KLHL9|55958|kelch-like 9 (Drosophila)##AB037775|KLHL9|55958|kelch-like 9 (Drosophila)##AL713669|KLHL9|55958|kelch-like 9 (Drosophila)##BC039133|KLHL9|55958|kelch-like 9 (Drosophila)##AK091715|KLHL9|55958|kelch-like 9 (Drosophila)##AY172949|KLHL9|55958|kelch-like 9 (Drosophila)##NM_018847|KLHL9|55958|kelch-like 9 (Drosophila)##BC069471|IFNA6|3443|interferon, alpha 6##BC096697|IFNA6|3443|interferon, alpha 6##BC096710|IFNA6|3443|interferon, alpha 6##BC096730|IFNA6|3443|interferon, alpha 6##BC098357|IFNA6|3443|interferon, alpha 6##NM_021002|IFNA6|3443|interferon, alpha 6##HQ258738|IFNA1|3439|interferon, alpha 1##BC093988|IFNA13|3447|interferon, alpha 13##BC112002|IFNA1|3439|interferon, alpha 1##BC069427|IFNA13|3447|interferon, alpha 13##NM_006900|IFNA13|3447|interferon, alpha 13	0.0	
chr14	53647434	53647552	reg1013181.p1	5.080	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-27443	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-27525	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-27620	-	NM_130851	773776	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	776040	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	1216228	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.0	
chr6	41034666	41034830	reg1027641.p2	5.080	+	AK223461 AK308197 AK310006 AK313288 NM_006789 BC047767 AF161698 BC069688 BC069764 AK300689	-13749	+	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	-24402	+	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	-27799	-	TSC_hg19_v1_chr6_-_41040208 BC011709 NM_145063 AK290939 AK310688 AK313361 BC021579 AJ420538	5509	-	TSC_hg19_v1_chr6_+_41040712 NM_002505 NM_021705	5951	+	TSC_hg19_v1_chr6_+_41040723 X59711	5974	+	AK223461|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK308197|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK310006|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK313288|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##NM_006789|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC047767|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AF161698|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069688|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069764|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK300689|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##BC011709|C6orf130|221443|chromosome 6 open reading frame 130##NM_145063|C6orf130|221443|chromosome 6 open reading frame 130##AK290939|C6orf130|221443|chromosome 6 open reading frame 130##AK310688|C6orf130|221443|chromosome 6 open reading frame 130##AK313361|C6orf130|221443|chromosome 6 open reading frame 130##BC021579|C6orf130|221443|chromosome 6 open reading frame 130##AJ420538|C6orf130|221443|chromosome 6 open reading frame 130##NM_002505|NFYA|4800|nuclear transcription factor Y, alpha##NM_021705|NFYA|4800|nuclear transcription factor Y, alpha##X59711|NFYA|4800|nuclear transcription factor Y, alpha	0.999898	CTCF.p2:12:1.000
chr10	120096	120182	reg1022931.p1	5.079	+	BC101270 BC101271 NM_177987	-24966	-	None	None	None	None	None	None	NM_006624 NM_001202465 NM_001202466 NM_212479 TSC_hg19_v1_chr10_+_180423	60274	+	TSC_hg19_v1_chr10_+_181412 BC091489 NM_001202464	61281	+	BC012586 X86098 NM_001202467 NM_001202468 AB385196 DQ335452 DQ335453 DQ335454 DQ335455 AK296427	105807	+	BC101270|TUBB8|347688|tubulin, beta 8 class VIII##BC101271|TUBB8|347688|tubulin, beta 8 class VIII##NM_177987|TUBB8|347688|tubulin, beta 8 class VIII##NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202465|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202466|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11##BC091489|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202464|ZMYND11|10771|zinc finger, MYND-type containing 11##BC012586|ZMYND11|10771|zinc finger, MYND-type containing 11##X86098|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202467|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202468|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335452|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335453|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335454|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335455|ZMYND11|10771|zinc finger, MYND-type containing 11##AK296427|ZMYND11|10771|zinc finger, MYND-type containing 11	0.299382	CTCF.p2:18:0.299
chr10	18883872	18883984	reg1022414.p2	5.079	+	NM_201570 AK299873 AK295113	-194365	+	AK310943 NM_201590	-254315	+	NM_000724 AB208917 U95019	-334288	+	AK074323 BC035778 NM_182543	56604	-	BC033534 TSC_hg19_v1_chr10_-_18948215	64269	-	TSC_hg19_v1_chr10_+_18948359 NM_178815 BC024163 AK027275 AF494061 DQ893166 DQ896464	64493	+	NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK310943|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201590|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK074323|NSUN6|221078|NOP2/Sun domain family, member 6##BC035778|NSUN6|221078|NOP2/Sun domain family, member 6##NM_182543|NSUN6|221078|NOP2/Sun domain family, member 6##NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B##BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B##AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B##AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B	0.998648	CTCF.p2:1:0.999
chr15	43218917	43219007	reg1001738.p1	5.079	+	AF525400 TSC_hg19_v1_chr15_-_43212975 AK131372 BC041876 NM_173500 BC071556	-5980	-	TSC_hg19_v1_chr15_-_43029327 AF525398 NM_138477	-189595	-	TSC_hg19_v1_chr15_-_43029313 BC052568 BC066640	-189742	-	AF525401 AY061886 AK292516 TSC_hg19_v1_chr15_-_43398234 AK056441 NM_174916 BC113505 BC113507 AK302489	179277	-	TSC_hg19_v1_chr15_-_43408716 D28374	189747	-	TSC_hg19_v1_chr15_+_43425795 BC009981 NM_024956	206951	+	AF525400|TTBK2|146057|tau tubulin kinase 2##AK131372|TTBK2|146057|tau tubulin kinase 2##BC041876|TTBK2|146057|tau tubulin kinase 2##NM_173500|TTBK2|146057|tau tubulin kinase 2##BC071556|TTBK2|146057|tau tubulin kinase 2##AF525398|CDAN1|146059|congenital dyserythropoietic anemia, type I##NM_138477|CDAN1|146059|congenital dyserythropoietic anemia, type I##BC052568|CDAN1|146059|congenital dyserythropoietic anemia, type I##BC066640|CDAN1|146059|congenital dyserythropoietic anemia, type I##AF525401|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##AY061886|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##AK292516|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##AK056441|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##NM_174916|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##BC113505|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##BC113507|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##AK302489|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##D28374|RPS3A|6189|ribosomal protein S3A##BC009981|TMEM62|80021|transmembrane protein 62##NM_024956|TMEM62|80021|transmembrane protein 62	0.0	
chr2	192167325	192167430	reg1026074.p2	5.079	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-57279	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-151070	-	TSC_hg19_v1_chr2_-_192015965 NM_003151	-151418	-	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	375485	+	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	544361	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	544594	-	NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##NM_003151|STAT4|6775|signal transducer and activator of transcription 4##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response	0.095982	
chr8	145704491	145704574	reg1023115.p1	5.079	+	AK090471 TSC_hg19_v1_chr8_+_145703480	-1071	+	AF076292 NM_003923	-2815	-	AB463647 TSC_hg19_v1_chr8_-_145701232 BC051376 BC065377	-3344	-	BC053506 NM_032902 BC049841	17620	+	AK225562 NM_005309 AK298488 AK303779 TSC_hg19_v1_chr8_+_145729525	24965	+	TSC_hg19_v1_chr8_+_145734481 BC011982 NM_138431	29966	+	AK090471|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A##AF076292|FOXH1|8928|forkhead box H1##NM_003923|FOXH1|8928|forkhead box H1##BC051376|FOXH1|8928|forkhead box H1##BC065377|FOXH1|8928|forkhead box H1##BC053506|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A##NM_032902|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A##BC049841|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A##AK225562|GPT|2875|glutamic-pyruvate transaminase (alanine aminotransferase)##NM_005309|GPT|2875|glutamic-pyruvate transaminase (alanine aminotransferase)##AK298488|GPT|2875|glutamic-pyruvate transaminase (alanine aminotransferase)##AK303779|GPT|2875|glutamic-pyruvate transaminase (alanine aminotransferase)##BC011982|MFSD3|113655|major facilitator superfamily domain containing 3##NM_138431|MFSD3|113655|major facilitator superfamily domain containing 3	0.0	
chr11	115800347	115800528	reg1029149.p2	5.078	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-425257	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-711789	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1251189	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	843261	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	858278	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	858301	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.0	
chr12	111920422	111920524	reg1027683.p1	5.078	+	AK126309 TSC_hg19_v1_chr12_-_111893987	-26550	-	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	-76724	+	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	-113563	-	TSC_hg19_v1_chr12_-_112036257 AK095017	115802	-	TSC_hg19_v1_chr12_-_112036908 AK307803	116440	-	TSC_hg19_v1_chr12_-_112037088 Y08262	116584	-	AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##AK095017|ATXN2|6311|ataxin 2##AK307803|ATXN2|6311|ataxin 2##Y08262|ATXN2|6311|ataxin 2	0.67387	CTCF.p2:-2:0.674
chr17	29395478	29395586	reg1027257.p2	5.078	+	TSC_hg19_v1_chr17_+_29298062 AK226030 BC082262 AK312979 AK122646 AK122709 AB470605 AY598332	-97392	+	NM_001184992 NM_032322 NM_197939 TSC_hg19_v1_chr17_+_29298040 BC126420 BC126422 BC144143 AJ496729 BC005084	-97534	+	AK074196 AJ238994 AJ242782 NM_018404 TSC_hg19_v1_chr17_+_29248960 AK074204 AK222526 AJ272195 BC033758 DQ288859	-146700	+	TSC_hg19_v1_chr17_+_29421944 D12625 NM_000267 NM_001042492 NM_001128147	26412	+	TSC_hg19_v1_chr17_+_29421994 AK289936 M82814 M89914 BC144643 D42072	26577	+	X51694 BC018050 AK222663 AK312445 NM_002544	228782	-	AK226030|RNF135|84282|ring finger protein 135##BC082262|RNF135|84282|ring finger protein 135##AK312979|RNF135|84282|ring finger protein 135##AK122646|RNF135|84282|ring finger protein 135##AK122709|RNF135|84282|ring finger protein 135##AB470605|RNF135|84282|ring finger protein 135##AY598332|RNF135|84282|ring finger protein 135##NM_001184992|RNF135|84282|ring finger protein 135##NM_032322|RNF135|84282|ring finger protein 135##NM_197939|RNF135|84282|ring finger protein 135##BC126420|RNF135|84282|ring finger protein 135##BC126422|RNF135|84282|ring finger protein 135##BC144143|RNF135|84282|ring finger protein 135##AJ496729|RNF135|84282|ring finger protein 135##BC005084|RNF135|84282|ring finger protein 135##AK074196|ADAP2|55803|ArfGAP with dual PH domains 2##AJ238994|ADAP2|55803|ArfGAP with dual PH domains 2##AJ242782|ADAP2|55803|ArfGAP with dual PH domains 2##NM_018404|ADAP2|55803|ArfGAP with dual PH domains 2##AK074204|ADAP2|55803|ArfGAP with dual PH domains 2##AK222526|ADAP2|55803|ArfGAP with dual PH domains 2##AJ272195|ADAP2|55803|ArfGAP with dual PH domains 2##BC033758|ADAP2|55803|ArfGAP with dual PH domains 2##DQ288859|ADAP2|55803|ArfGAP with dual PH domains 2##D12625|NF1|4763|neurofibromin 1##NM_000267|NF1|4763|neurofibromin 1##NM_001042492|NF1|4763|neurofibromin 1##NM_001128147|NF1|4763|neurofibromin 1##AK289936|NF1|4763|neurofibromin 1##M82814|NF1|4763|neurofibromin 1##M89914|NF1|4763|neurofibromin 1##BC144643|NF1|4763|neurofibromin 1##D42072|NF1|4763|neurofibromin 1##X51694|OMG|4974|oligodendrocyte myelin glycoprotein##BC018050|OMG|4974|oligodendrocyte myelin glycoprotein##AK222663|OMG|4974|oligodendrocyte myelin glycoprotein##AK312445|OMG|4974|oligodendrocyte myelin glycoprotein##NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein	1.106053	CTCF.p2:15:0.939
chr19	11146496	11146676	reg1000914.p1	5.078	+	BC136644 AB590582 BC151849 EU430756 EU430757 EU430758 EU430759 NM_001128845 NM_001128846 NM_001128847 NM_001128848 AB209313	-51710	+	TSC_hg19_v1_chr19_+_11071823 NM_001128849 U29175 D26156	-74762	+	TSC_hg19_v1_chr19_+_11071720 BC035916	-74836	+	NM_000527 NM_001195798 NM_001195799 NM_001195800 NM_001195802 NM_001195803 TSC_hg19_v1_chr19_+_11200115	53491	+	TSC_hg19_v1_chr19_+_11200138 AK295612 AK296312 AK299038 AK300313	53546	+	TSC_hg19_v1_chr19_+_11200148 AB209409 BC014514 AY114155 AB384938 DQ893879 BT007361	53599	+	BC136644|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC151849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430756|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430757|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430758|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430759|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128845|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128846|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128847|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128848|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##AB209313|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##U29175|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##D26156|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_000527|LDLR|3949|low density lipoprotein receptor##NM_001195798|LDLR|3949|low density lipoprotein receptor##NM_001195799|LDLR|3949|low density lipoprotein receptor##NM_001195800|LDLR|3949|low density lipoprotein receptor##NM_001195802|LDLR|3949|low density lipoprotein receptor##NM_001195803|LDLR|3949|low density lipoprotein receptor##AK295612|LDLR|3949|low density lipoprotein receptor##AK296312|LDLR|3949|low density lipoprotein receptor##AK299038|LDLR|3949|low density lipoprotein receptor##AK300313|LDLR|3949|low density lipoprotein receptor##AB209409|LDLR|3949|low density lipoprotein receptor##BC014514|LDLR|3949|low density lipoprotein receptor##AY114155|LDLR|3949|low density lipoprotein receptor##DQ893879|LDLR|3949|low density lipoprotein receptor##BT007361|LDLR|3949|low density lipoprotein receptor	0.0	
chr19	14616363	14616467	reg1024400.p1	5.078	+	TSC_hg19_v1_chr19_-_14606940 NM_005716 NM_202467 NM_202468 NM_202469 NM_202470 NM_202494	-9472	-	TSC_hg19_v1_chr19_-_14606928 AF089816 AK290252 AK290948 BC000410 BC012810 BC016169	-9500	-	TSC_hg19_v1_chr19_-_14586167 BC051286 NM_000955	-30247	-	CR536485 CR541677 AB463573 CU676466 BC019827 BC002352 BC013157 D49547 NM_006145 TSC_hg19_v1_chr19_-_14629210 X62421	12778	-	TSC_hg19_v1_chr19_-_14629233 AK312624	12815	-	AK296609 TSC_hg19_v1_chr19_-_14629237	12875	-	NM_005716|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202467|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202468|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202469|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202470|GIPC1|10755|GIPC PDZ domain containing family, member 1##NM_202494|GIPC1|10755|GIPC PDZ domain containing family, member 1##AF089816|GIPC1|10755|GIPC PDZ domain containing family, member 1##AK290252|GIPC1|10755|GIPC PDZ domain containing family, member 1##AK290948|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC000410|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC012810|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC016169|GIPC1|10755|GIPC PDZ domain containing family, member 1##BC051286|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##NM_000955|PTGER1|5731|prostaglandin E receptor 1 (subtype EP1), 42kDa##CR536485|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##CR541677|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##BC019827|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##BC002352|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##BC013157|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##D49547|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##NM_006145|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##X62421|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1##AK312624|DNAJB1|3337|DnaJ (Hsp40) homolog, subfamily B, member 1	0.010242	
chr19	4495664	4495787	reg1033403.p1	5.078	+	BC009449 TSC_hg19_v1_chr19_+_4488757	-6999	+	TSC_hg19_v1_chr19_+_4472263 NM_001001520 NM_032631 AY358600 AF294267 BC000755 CU674386 DQ892175 DQ895370	-23378	+	AF272893 NM_025241	-37936	-	NM_001080400	21990	-	DQ839131 BC131524 BC033570 NM_001013706 TSC_hg19_v1_chr19_-_4535237	39495	-	AF403428 NM_052972 BC034389 AB073607 AK027382 AK303861 AK314506 TSC_hg19_v1_chr19_-_4540049	44319	-	BC009449|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##NM_001001520|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##NM_032631|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##AY358600|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##AF294267|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##BC000755|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##DQ892175|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##DQ895370|HDGFRP2|84717|hepatoma-derived growth factor-related protein 2##AF272893|UBXN6|80700|UBX domain protein 6##NM_025241|UBXN6|80700|UBX domain protein 6##NM_001080400|PLIN4|729359|perilipin 4##DQ839131|PLIN5|440503|perilipin 5##BC131524|PLIN5|440503|perilipin 5##BC033570|PLIN5|440503|perilipin 5##NM_001013706|PLIN5|440503|perilipin 5##AF403428|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_052972|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##BC034389|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AB073607|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK027382|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK303861|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK314506|LRG1|116844|leucine-rich alpha-2-glycoprotein 1	0.544766	CTCF.p2:0:0.545
chr2	238533322	238533431	reg1026579.p1	5.078	+	BC023661 AK225423 AK022600 NM_022449	-33636	-	TSC_hg19_v1_chr2_-_238499327 BC009827 BC050426 AL136645	-34030	-	AB015419 BC069081 BC069284 NM_015893	-58160	+	TSC_hg19_v1_chr2_+_238536229 NM_001137550 AF115510	2983	+	TSC_hg19_v1_chr2_+_238600798 BC018883 BC019335 NM_001137551 NM_001137552 NM_001137553 NM_004735	67431	+	TSC_hg19_v1_chr2_+_238600975 AJ223075 BC001385 AK298270 U69609 BC108913 BC108914 AK307485	67567	+	BC023661|RAB17|64284|RAB17, member RAS oncogene family##AK225423|RAB17|64284|RAB17, member RAS oncogene family##AK022600|RAB17|64284|RAB17, member RAS oncogene family##NM_022449|RAB17|64284|RAB17, member RAS oncogene family##BC009827|RAB17|64284|RAB17, member RAS oncogene family##BC050426|RAB17|64284|RAB17, member RAS oncogene family##AL136645|RAB17|64284|RAB17, member RAS oncogene family##AB015419|PRLH|51052|prolactin releasing hormone##BC069081|PRLH|51052|prolactin releasing hormone##BC069284|PRLH|51052|prolactin releasing hormone##NM_015893|PRLH|51052|prolactin releasing hormone##NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC018883|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC019335|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137551|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137552|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137553|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_004735|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AJ223075|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC001385|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK298270|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##U69609|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108913|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108914|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK307485|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	0.68123	CTCF.p2:11:0.681
chr10	1411187	1411306	reg1029609.p1	5.077	+	TSC_hg19_v1_chr10_+_1102822 AK292591	-308420	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-308477	+	BC057827 TSC_hg19_v1_chr10_-_1102645	-308594	-	AF034837 NM_018702	368423	-	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	1698501	+	AK092597 AX747622 NM_001242339	1699572	+	AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC057827|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet	0.0	
chr12	78956477	78956641	reg1029136.p1	5.077	+	NM_014903 AJ488201	-731427	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-1497270	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-1683776	-	AK094616 NM_001135805	301213	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	301916	+	TSC_hg19_v1_chr12_+_79258517 BX647240	301977	+	NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I##BX647240|SYT1|6857|synaptotagmin I	0.992408	CTCF.p2:21:0.992
chr19	16696648	16696829	reg1020146.p1	5.077	+	TSC_hg19_v1_chr19_+_16683381 AK094229	-13341	+	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	-13542	-	TSC_hg19_v1_chr19_-_16653256 NM_006387	-43475	-	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	42262	-	TSC_hg19_v1_chr19_-_16770944 AK025602 BC069279 BX648276	74191	-	TSC_hg19_v1_chr19_-_16770956 NM_024104	74224	-	BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##NM_006387|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26##AK025602|C19orf42|79086|chromosome 19 open reading frame 42##BC069279|C19orf42|79086|chromosome 19 open reading frame 42##BX648276|C19orf42|79086|chromosome 19 open reading frame 42##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42	0.0	
chr3	48673211	48673367	reg1028823.p1	5.077	+	AK056237 NM_022911 NM_134263 NM_134426 TSC_hg19_v1_chr3_-_48672944	-342	-	TSC_hg19_v1_chr3_-_48672883 DQ891721 EU176609 EU832127 AF288410 AF416721 AK297695 BC017697 AB033288	-442	-	AF279265 NM_001040454	-2011	-	TSC_hg19_v1_chr3_-_48700322 AF231023 NM_001407	27046	-	AB384897 CU677561 BC016052 BC006255 TSC_hg19_v1_chr3_-_48723349 AF303581 BC026280 AF178432 AJ242655 AY453794 NM_016453 NM_184231	50006	-	TSC_hg19_v1_chr3_-_48754622 BC019694 AK291501 AY007091 BC001864 BC065533 BC004469 AK304714 AK315204 AK024045 AK290526 AL137514 BX537544 NM_001005909 NM_001005910 NM_001005911 NM_001146178 NM_001146179 NM_001190316 NM_001190317 NM_016291	81360	-	AK056237|SLC26A6|65010|solute carrier family 26, member 6##NM_022911|SLC26A6|65010|solute carrier family 26, member 6##NM_134263|SLC26A6|65010|solute carrier family 26, member 6##NM_134426|SLC26A6|65010|solute carrier family 26, member 6##DQ891721|SLC26A6|65010|solute carrier family 26, member 6##EU176609|SLC26A6|65010|solute carrier family 26, member 6##EU832127|SLC26A6|65010|solute carrier family 26, member 6##AF288410|SLC26A6|65010|solute carrier family 26, member 6##AF416721|SLC26A6|65010|solute carrier family 26, member 6##AK297695|SLC26A6|65010|solute carrier family 26, member 6##BC017697|SLC26A6|65010|solute carrier family 26, member 6##AB033288|SLC26A6|65010|solute carrier family 26, member 6##AF279265|SLC26A6|65010|solute carrier family 26, member 6##NM_001040454|SLC26A6|65010|solute carrier family 26, member 6##AF231023|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)##NM_001407|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)##BC016052|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC006255|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF303581|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC026280|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF178432|NCKIPSD|51517|NCK interacting protein with SH3 domain##AJ242655|NCKIPSD|51517|NCK interacting protein with SH3 domain##AY453794|NCKIPSD|51517|NCK interacting protein with SH3 domain##NM_016453|NCKIPSD|51517|NCK interacting protein with SH3 domain##NM_184231|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2##AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2##AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2##BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2##BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2##BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2##AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2##AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2##AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2##AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2##AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2##BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2	0.436206	CTCF.p2:33:0.436
chr12	85470510	85470634	reg1027581.p1	5.076	+	AK022365 NM_001079910 BC005399 BC093088 AK307799	-40449	+	AK126325 NM_001100917	-40518	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	-163980	-	U31986 TSC_hg19_v1_chr12_+_85673999 BC010923 NM_006982	203387	+	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	759473	-	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	759665	-	AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK126325|TSPAN19|144448|tetraspanin 19##NM_001100917|TSPAN19|144448|tetraspanin 19##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##U31986|ALX1|8092|ALX homeobox 1##BC010923|ALX1|8092|ALX homeobox 1##NM_006982|ALX1|8092|ALX homeobox 1##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9	0.976484	CTCF.p2:11:0.976
chr1	32837934	32838050	reg1027630.p1	5.076	+	NM_001167676	-10149	-	BC035354 NM_052841	-10163	+	TSC_hg19_v1_chr1_-_32801835 AB528178 CU688192 AM393505 DQ893237 DQ896567 X70326 AL713653 AY007131 BC007904 BC066915 NM_023009	-36261	-	CR457252 TSC_hg19_v1_chr1_-_32860030 BC010573 CR749228 BX641056 AK300231 BC026322 AK297604 AK300306 AK001138 AK225717 AK293454 BC028381 AK021440 AK297352 AK225026 AK304477 AK316172 NM_001143888 NM_001143889 NM_001143890 NM_018045	22045	-	TSC_hg19_v1_chr1_+_32930659 AK092326 AX747483 NM_001145720	92660	+	NM_001040441	166779	+	NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##AM393505|MARCKSL1|65108|MARCKS-like 1##DQ893237|MARCKSL1|65108|MARCKS-like 1##DQ896567|MARCKSL1|65108|MARCKS-like 1##X70326|MARCKSL1|65108|MARCKS-like 1##AL713653|MARCKSL1|65108|MARCKS-like 1##AY007131|MARCKSL1|65108|MARCKS-like 1##BC007904|MARCKSL1|65108|MARCKS-like 1##BC066915|MARCKSL1|65108|MARCKS-like 1##NM_023009|MARCKSL1|65108|MARCKS-like 1##CR457252|BSDC1|55108|BSD domain containing 1##BC010573|BSDC1|55108|BSD domain containing 1##CR749228|BSDC1|55108|BSD domain containing 1##BX641056|BSDC1|55108|BSD domain containing 1##AK300231|BSDC1|55108|BSD domain containing 1##BC026322|BSDC1|55108|BSD domain containing 1##AK297604|BSDC1|55108|BSD domain containing 1##AK300306|BSDC1|55108|BSD domain containing 1##AK001138|BSDC1|55108|BSD domain containing 1##AK225717|BSDC1|55108|BSD domain containing 1##AK293454|BSDC1|55108|BSD domain containing 1##BC028381|BSDC1|55108|BSD domain containing 1##AK021440|BSDC1|55108|BSD domain containing 1##AK297352|BSDC1|55108|BSD domain containing 1##AK225026|BSDC1|55108|BSD domain containing 1##AK304477|BSDC1|55108|BSD domain containing 1##AK316172|BSDC1|55108|BSD domain containing 1##NM_001143888|BSDC1|55108|BSD domain containing 1##NM_001143889|BSDC1|55108|BSD domain containing 1##NM_001143890|BSDC1|55108|BSD domain containing 1##NM_018045|BSDC1|55108|BSD domain containing 1##NM_001145720|ZBTB8B|728116|zinc finger and BTB domain containing 8B##NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A	0.0	
chr8	128176064	128176240	reg1028614.p1	5.076	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-605428	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-605597	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1212739	-	DQ486513 NM_001159542	251704	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	572173	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	572338	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.034213	
chr1	101854709	101854890	reg1024650.p2	5.075	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-152229	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-152418	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-363366	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	607688	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	607991	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1641984	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.0	
chr18	22890271	22890373	reg1028797.p1	5.075	+	AF312230 BC069136 NM_001143828 NM_001160166 NM_021624 AB045370 BC112348 AB044934 AF307973 AF325356 AF329449 AJ298292 AY008280 AY136745 DQ835186 DQ835187	-849680	+	TSC_hg19_v1_chr18_+_22006671 AK312727 BC034016 AB026264 AB587563 CU689806 DQ893141 EU176771 AF208694	-883657	+	TSC_hg19_v1_chr18_+_22006608 AK292533 NM_018439 BC036074	-883715	+	TSC_hg19_v1_chr18_-_22931121 AB385259	40826	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	41715	-	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	41841	-	AF312230|HRH4|59340|histamine receptor H4##BC069136|HRH4|59340|histamine receptor H4##NM_001143828|HRH4|59340|histamine receptor H4##NM_001160166|HRH4|59340|histamine receptor H4##NM_021624|HRH4|59340|histamine receptor H4##AB045370|HRH4|59340|histamine receptor H4##BC112348|HRH4|59340|histamine receptor H4##AB044934|HRH4|59340|histamine receptor H4##AF307973|HRH4|59340|histamine receptor H4##AF325356|HRH4|59340|histamine receptor H4##AF329449|HRH4|59340|histamine receptor H4##AJ298292|HRH4|59340|histamine receptor H4##AY008280|HRH4|59340|histamine receptor H4##AY136745|HRH4|59340|histamine receptor H4##DQ835186|HRH4|59340|histamine receptor H4##DQ835187|HRH4|59340|histamine receptor H4##AK312727|IMPACT|55364|Impact homolog (mouse)##BC034016|IMPACT|55364|Impact homolog (mouse)##AB026264|IMPACT|55364|Impact homolog (mouse)##DQ893141|IMPACT|55364|Impact homolog (mouse)##EU176771|IMPACT|55364|Impact homolog (mouse)##AF208694|IMPACT|55364|Impact homolog (mouse)##AK292533|IMPACT|55364|Impact homolog (mouse)##NM_018439|IMPACT|55364|Impact homolog (mouse)##BC036074|IMPACT|55364|Impact homolog (mouse)##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521	0.965039	CTCF.p2:7:0.965
chr21	38929767	38929898	reg1026573.p2	5.075	+	NM_130438 NM_001396 U52373 D85759 U58496	-137212	+	D86550 NM_130436	-138626	+	AF108830 NM_101395 AB015283 AB015284	-189962	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	358879	-	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	563569	-	BC013327 NM_002243	698831	+	NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.0	
chr2	208176020	208176200	reg1020614.p1	5.075	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-144485	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-145454	-	BC112076 BC112078 NM_173077 AJ422118	-371810	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	218533	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	218611	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	218671	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.0	
chr7	11597446	11597550	reg1028404.p1	5.075	+	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	-583988	+	AK130950 TSC_hg19_v1_chr7_-_10979760 AK024837 U94586 BC105295 NM_002489	-617714	-	CR407618 CR541716 TSC_hg19_v1_chr7_-_10979730 AF201077 BC101794 BC101796	-617789	-	TSC_hg19_v1_chr7_-_11871825 AK092252 AX747433 NM_015204	274291	-	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	653427	+	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	846034	-	AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14##AK130950|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK024837|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##U94586|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC105295|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_002489|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR407618|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR541716|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AF201077|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101794|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101796|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains	0.67725	CTCF.p2:-14:0.677
chr7	69658613	69658767	reg1027295.p2	5.075	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-594102	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-594361	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-594854	+	TSC_hg19_v1_chr7_+_70231164 AK296981	572515	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	939098	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2143088	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.889781	CTCF.p2:-12:0.890
chr10	31670985	31671163	reg1028480.p2	5.074	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-60985	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-62941	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-63117	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	546650	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	546711	-	TSC_hg19_v1_chr10_-_32344938 AB462413	673858	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.0	
chr10	38679784	38679899	reg1026202.p1	5.074	+	AK295332 AY829267 AF165514 AF165517 BC071987 TSC_hg19_v1_chr10_+_38645320 AK293968 AK307174 CU687208	-34504	+	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	-296558	+	TSC_hg19_v1_chr10_+_38299631 NM_006954 NM_006974 AK303445 AK292844 BC017760 AK027057 D31763	-380246	+	TSC_hg19_v1_chr10_-_38691741 BC171738 BC042387 BC048143	11915	-	TSC_hg19_v1_chr10_-_42863441 AF519622 AK131313	4183622	-	AX721135 TSC_hg19_v1_chr10_-_43048257 AK308832 AK026980 BC045697 AX721116	4368361	-	AK295332|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AY829267|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165514|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165517|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC071987|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK293968|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK307174|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A##NM_006954|ZNF33A|7581|zinc finger protein 33A##NM_006974|ZNF33A|7581|zinc finger protein 33A##AK303445|ZNF33A|7581|zinc finger protein 33A##AK292844|ZNF33A|7581|zinc finger protein 33A##BC017760|ZNF33A|7581|zinc finger protein 33A##AK027057|ZNF33A|7581|zinc finger protein 33A##D31763|ZNF33A|7581|zinc finger protein 33A##BC171738|SEPT7L|285961|septin 7-like##BC042387|SEPT7L|285961|septin 7-like##BC048143|SEPT7L|285961|septin 7-like##AF519622|LOC441666|441666|zinc finger protein 91 pseudogene##AK308832|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##AK026980|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC045697|ZNF37BP|100129482|zinc finger protein 37B, pseudogene	0.197891	
chr1	173794245	173794426	reg1025746.p2	5.074	+	TSC_hg19_v1_chr1_+_173793980 AL833633 AK290873	-308	+	BC045173 TSC_hg19_v1_chr1_+_173793817	-518	+	TSC_hg19_v1_chr1_+_173793807 NM_018122	-549	+	TSC_hg19_v1_chr1_-_173837130 AL110141 BC038733	42792	-	NM_001122770 NM_032522 AK302696 BC003116 BC006315	43176	+	D29832 TSC_hg19_v1_chr1_-_173886429	92084	-	AL833633|DARS2|55157|aspartyl-tRNA synthetase 2, mitochondrial##AK290873|DARS2|55157|aspartyl-tRNA synthetase 2, mitochondrial##BC045173|DARS2|55157|aspartyl-tRNA synthetase 2, mitochondrial##NM_018122|DARS2|55157|aspartyl-tRNA synthetase 2, mitochondrial##AL110141|GAS5|60674|growth arrest-specific 5 (non-protein coding)##BC038733|GAS5|60674|growth arrest-specific 5 (non-protein coding)##NM_001122770|ZBTB37|84614|zinc finger and BTB domain containing 37##NM_032522|ZBTB37|84614|zinc finger and BTB domain containing 37##AK302696|ZBTB37|84614|zinc finger and BTB domain containing 37##BC003116|ZBTB37|84614|zinc finger and BTB domain containing 37##BC006315|ZBTB37|84614|zinc finger and BTB domain containing 37##D29832|SERPINC1|462|serpin peptidase inhibitor, clade C (antithrombin), member 1	0.012659	
chr1	27165531	27165650	reg1018363.p2	5.074	+	TSC_hg19_v1_chr1_+_27153178 BC066776 NM_032283	-12393	+	AK000484 AK225521 AK301626 NM_001202554 AK056539	-50909	+	TSC_hg19_v1_chr1_+_27114455 NM_017837 BC013568	-51134	+	BC023552 AF029082 NM_006142 TSC_hg19_v1_chr1_+_27189639 BC001550 BC000329 BC002995 BC000995 AB464718 M93010 DQ894162 CU674492 CR541905 CR541926	24075	+	CU675813 AY364261 TSC_hg19_v1_chr1_-_27216757 BC007815 BC008634 BC020272	51085	-	TSC_hg19_v1_chr1_-_27216775 AK022535 AY358864	51182	-	BC066776|ZDHHC18|84243|zinc finger, DHHC-type containing 18##NM_032283|ZDHHC18|84243|zinc finger, DHHC-type containing 18##AK000484|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK225521|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK301626|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_001202554|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK056539|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_017837|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##BC013568|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##BC023552|SFN|2810|stratifin##AF029082|SFN|2810|stratifin##NM_006142|SFN|2810|stratifin##BC001550|SFN|2810|stratifin##BC000329|SFN|2810|stratifin##BC002995|SFN|2810|stratifin##BC000995|SFN|2810|stratifin##M93010|SFN|2810|stratifin##DQ894162|SFN|2810|stratifin##CR541905|SFN|2810|stratifin##CR541926|SFN|2810|stratifin##AY364261|GPN2|54707|GPN-loop GTPase 2##BC007815|GPN2|54707|GPN-loop GTPase 2##BC008634|GPN2|54707|GPN-loop GTPase 2##BC020272|GPN2|54707|GPN-loop GTPase 2##AK022535|GPN2|54707|GPN-loop GTPase 2##AY358864|GPN2|54707|GPN-loop GTPase 2	0.0	
chr16	4561657	4561772	reg1025418.p1	5.074	+	AK093388 NM_001127205	-15856	+	NM_001127204 NM_002134 AK313660 TSC_hg19_v1_chr16_+_4526411 BC002396 S34389 AK222629	-35311	+	AF225419 NM_020677	-36819	-	AK311295 BC007604 TSC_hg19_v1_chr16_-_4563123	1337	-	TSC_hg19_v1_chr16_-_4588442 AF195661 AL833853 NM_001199054	26723	-	TSC_hg19_v1_chr16_-_4588775 BC002882 AK292036 AK302297 AL136698 AK294257 DQ167023 NM_001199055 NM_001199056 NM_013399 AK307067 AK308532	27078	-	AK093388|HMOX2|3163|heme oxygenase (decycling) 2##NM_001127205|HMOX2|3163|heme oxygenase (decycling) 2##NM_001127204|HMOX2|3163|heme oxygenase (decycling) 2##NM_002134|HMOX2|3163|heme oxygenase (decycling) 2##AK313660|HMOX2|3163|heme oxygenase (decycling) 2##BC002396|HMOX2|3163|heme oxygenase (decycling) 2##S34389|HMOX2|3163|heme oxygenase (decycling) 2##AK222629|HMOX2|3163|heme oxygenase (decycling) 2##AF225419|NMRAL1|57407|NmrA-like family domain containing 1##NM_020677|NMRAL1|57407|NmrA-like family domain containing 1##AK311295|C16orf5|29965|chromosome 16 open reading frame 5##BC007604|C16orf5|29965|chromosome 16 open reading frame 5##AF195661|C16orf5|29965|chromosome 16 open reading frame 5##AL833853|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199054|C16orf5|29965|chromosome 16 open reading frame 5##BC002882|C16orf5|29965|chromosome 16 open reading frame 5##AK292036|C16orf5|29965|chromosome 16 open reading frame 5##AK302297|C16orf5|29965|chromosome 16 open reading frame 5##AL136698|C16orf5|29965|chromosome 16 open reading frame 5##AK294257|C16orf5|29965|chromosome 16 open reading frame 5##DQ167023|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199055|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199056|C16orf5|29965|chromosome 16 open reading frame 5##NM_013399|C16orf5|29965|chromosome 16 open reading frame 5##AK307067|C16orf5|29965|chromosome 16 open reading frame 5##AK308532|C16orf5|29965|chromosome 16 open reading frame 5	0.0	
chr11	26572839	26572984	reg1027037.p1	5.073	+	NM_031418 AK302659	-219181	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-2054262	+	NM_001195637	-3690940	-	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	20829	-	BC049207 NM_178498	170648	-	NM_203371 TSC_hg19_v1_chr11_+_27015658	442731	+	NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)	0.78938	CTCF.p2:24:0.789
chr12	111136400	111136486	reg1000450.p2	5.073	+	AK293543 NM_001040107	-8844	-	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	-9485	-	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	-84518	+	L07395 AK297882 AB590512 EU831993 EU832086 TSC_hg19_v1_chr12_-_111180593	44103	-	TSC_hg19_v1_chr12_-_111180641 X74008 BC014073	44213	-	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	44313	-	AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##L07395|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK297882|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU831993|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU832086|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##X74008|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC014073|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme	0.0	
chr17	28049727	28049907	reg1029236.p2	5.073	+	BC028205 TSC_hg19_v1_chr17_-_27949878 AL833952	-99966	-	AK096431 NM_032854	-101425	-	TSC_hg19_v1_chr17_+_27920483 NM_152345	-129315	+	TSC_hg19_v1_chr17_-_28088446 BC011636	38641	-	AK302745 AK303060 NM_001145053 AK299608	207079	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	207316	-	BC028205|CORO6|84940|coronin 6##AL833952|CORO6|84940|coronin 6##AK096431|CORO6|84940|coronin 6##NM_032854|CORO6|84940|coronin 6##NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B##BC011636|SSH2|85464|slingshot homolog 2 (Drosophila)##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)	0.0	
chr22	23062704	23062865	reg1026025.p1	5.073	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	-7902	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	-22266	+	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	-33581	+	TSC_hg19_v1_chr22_+_23063107 M18645 X53070 BC073786 X57805 X57813 AF026926 L35916 L35917 L35918 L35920 U43769 X64165 X64166 X54442	347	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	72322	+	TSC_hg19_v1_chr22_+_23154240 L29158 L29159 L29160 L29161 L29164 BC032452 BC089414 AY190827 X57810 L26902	91491	+	BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3##DQ896079|IGL@|3535|immunoglobulin lambda locus##BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25##L35918|IGLJ3|28831|immunoglobulin lambda joining 3	0.964201	CTCF.p2:-14:0.964
chr3	155470970	155471095	reg1029525.p1	5.073	+	BC113950 NM_014996	-49036	-	NM_001130960 NM_001130961 TSC_hg19_v1_chr3_-_155394133 AK096620	-76878	-	NM_007289 TSC_hg19_v1_chr3_+_154798107 BC101632 BC143465 BC101658	-672899	+	BC042198 AF115515 TSC_hg19_v1_chr3_-_155524068 BC064898 AK055701 NM_173657 AL832165 AK289890	53029	-	D88152 TSC_hg19_v1_chr3_-_155572196 BC014416 AK312268 NM_001190992 NM_004733	101174	-	TSC_hg19_v1_chr3_+_155588290 NM_003875	117269	+	BC113950|PLCH1|23007|phospholipase C, eta 1##NM_014996|PLCH1|23007|phospholipase C, eta 1##NM_001130960|PLCH1|23007|phospholipase C, eta 1##NM_001130961|PLCH1|23007|phospholipase C, eta 1##AK096620|PLCH1|23007|phospholipase C, eta 1##NM_007289|MME|4311|membrane metallo-endopeptidase##BC101632|MME|4311|membrane metallo-endopeptidase##BC143465|MME|4311|membrane metallo-endopeptidase##BC101658|MME|4311|membrane metallo-endopeptidase##BC042198|C3orf33|285315|chromosome 3 open reading frame 33##AF115515|C3orf33|285315|chromosome 3 open reading frame 33##BC064898|C3orf33|285315|chromosome 3 open reading frame 33##AK055701|C3orf33|285315|chromosome 3 open reading frame 33##NM_173657|C3orf33|285315|chromosome 3 open reading frame 33##AL832165|C3orf33|285315|chromosome 3 open reading frame 33##AK289890|C3orf33|285315|chromosome 3 open reading frame 33##D88152|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##BC014416|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##AK312268|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##NM_001190992|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##NM_004733|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##NM_003875|GMPS|8833|guanine monphosphate synthetase	0.931642	CTCF.p2:-8:0.932
chr8	99986820	99986916	reg1023870.p1	5.073	+	NM_001142462 NM_053001 TSC_hg19_v1_chr8_+_99956669 AK074518 AK291491 AK310994 BC016936 AY038073	-30211	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	-149021	-	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	-547522	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	38627	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	38644	+	TSC_hg19_v1_chr8_+_100025537 BC094749	38722	+	NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)##NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)##AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)##AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)##AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)##BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)##AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)##U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3##BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##BC094749|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)	0.505623	CTCF.p2:0:0.506
chr1	25349075	25349255	reg1021105.p1	5.072	+	BC013362 AK310945 NM_001031680 AF022726	-57623	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-92379	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-92426	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	209822	-	BC065040 TSC_hg19_v1_chr1_-_25573922	224758	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	224808	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr13	28572172	28572310	reg1027804.p1	5.072	+	NM_001105577	-9468	-	TSC_hg19_v1_chr13_-_28543453 Y13709	-28778	-	TSC_hg19_v1_chr13_-_28543325 BC014461 NM_001265	-28933	-	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	102446	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	140425	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	497003	-	NM_001105577|PRHOXNB|646625|parahox cluster neighbor##Y13709|CDX2|1045|caudal type homeobox 2##BC014461|CDX2|1045|caudal type homeobox 2##NM_001265|CDX2|1045|caudal type homeobox 2##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	0.843249	CTCF.p2:-3:0.843
chr16	70542771	70542888	reg1026140.p1	5.072	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	-39989	+	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	-54330	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	-69848	-	BC027726 AB088369 BC128144 BC128145 AK022874 BC072438 TSC_hg19_v1_chr16_-_70557452 BX648010 AK293235 AK297557 AK096557 NM_001195139 NM_015386	14615	-	TSC_hg19_v1_chr16_+_70557713 NM_012426 AK291768	14871	+	BC009780 TSC_hg19_v1_chr16_+_70557724	14895	+	AK096727|FUK|197258|fucokinase##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##BC027726|COG4|25839|component of oligomeric golgi complex 4##AB088369|COG4|25839|component of oligomeric golgi complex 4##BC128144|COG4|25839|component of oligomeric golgi complex 4##BC128145|COG4|25839|component of oligomeric golgi complex 4##AK022874|COG4|25839|component of oligomeric golgi complex 4##BC072438|COG4|25839|component of oligomeric golgi complex 4##BX648010|COG4|25839|component of oligomeric golgi complex 4##AK293235|COG4|25839|component of oligomeric golgi complex 4##AK297557|COG4|25839|component of oligomeric golgi complex 4##AK096557|COG4|25839|component of oligomeric golgi complex 4##NM_001195139|COG4|25839|component of oligomeric golgi complex 4##NM_015386|COG4|25839|component of oligomeric golgi complex 4##NM_012426|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##AK291768|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##BC009780|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa	0.085507	
chr17	25681674	25681812	reg1009721.p2	5.072	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-60462	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-60621	+	NM_001190452	-3659307	+	BC035488 BC042106 NM_014238	117286	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	276425	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	276460	+	AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.0	
chr1	8035431	8035572	reg1028973.p1	5.072	+	TSC_hg19_v1_chr1_+_8021770 BC008188	-13705	+	AF021819 TSC_hg19_v1_chr1_+_8021756 AK130886 AK312000	-13741	+	TSC_hg19_v1_chr1_+_8021722 NM_001123377 NM_007262	-13780	+	AB528431 AJ276373 DQ892137 DQ895331 BC012839 TSC_hg19_v1_chr1_-_8075752	40214	-	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	50860	-	NM_018948 TSC_hg19_v1_chr1_-_8086396	50897	-	BC008188|PARK7|11315|parkinson protein 7##AF021819|PARK7|11315|parkinson protein 7##AK130886|PARK7|11315|parkinson protein 7##AK312000|PARK7|11315|parkinson protein 7##NM_001123377|PARK7|11315|parkinson protein 7##NM_007262|PARK7|11315|parkinson protein 7##AJ276373|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ892137|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ895331|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC012839|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1	0.747585	CTCF.p2:10:0.561
chr2	37803027	37803177	reg1032778.p1	5.072	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-231289	+	BC030706 BC012820 AB015982 NM_005813	-258909	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-344256	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	95677	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	96287	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	349330	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.070682	
chr5	149969451	149969579	reg1029022.p1	5.072	+	AK292448 NM_001543 U36600	-81802	+	TSC_hg19_v1_chr5_+_149865341 AB209107	-104076	+	TSC_hg19_v1_chr5_-_149829301 BC003401 BC001126 BC006784 BC110792 AK312179 BC091474 NM_001025070 NM_001025071 NM_005617	-140224	-	TSC_hg19_v1_chr5_+_149980641 AL831818 NM_001166208	11127	+	AK127049 NM_001166209	27690	+	TSC_hg19_v1_chr5_+_150020221 NM_001109974 NM_007286 AK290178 BC042624 BC146665 AB028952 BC152538 BC142683 AF499136 AF499137	50778	+	AK292448|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##NM_001543|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##U36600|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##BC003401|RPS14|6208|ribosomal protein S14##BC001126|RPS14|6208|ribosomal protein S14##BC006784|RPS14|6208|ribosomal protein S14##BC110792|RPS14|6208|ribosomal protein S14##AK312179|RPS14|6208|ribosomal protein S14##BC091474|RPS14|6208|ribosomal protein S14##NM_001025070|RPS14|6208|ribosomal protein S14##NM_001025071|RPS14|6208|ribosomal protein S14##NM_005617|RPS14|6208|ribosomal protein S14##AL831818|SYNPO|11346|synaptopodin##NM_001166208|SYNPO|11346|synaptopodin##AK127049|SYNPO|11346|synaptopodin##NM_001166209|SYNPO|11346|synaptopodin##NM_001109974|SYNPO|11346|synaptopodin##NM_007286|SYNPO|11346|synaptopodin##AK290178|SYNPO|11346|synaptopodin##BC042624|SYNPO|11346|synaptopodin##BC146665|SYNPO|11346|synaptopodin##AB028952|SYNPO|11346|synaptopodin##BC152538|SYNPO|11346|synaptopodin##BC142683|SYNPO|11346|synaptopodin##AF499136|SYNPO|11346|synaptopodin##AF499137|SYNPO|11346|synaptopodin	0.0	
chrX	74823780	74823900	reg1028040.p1	5.072	+	TSC_hg19_v1_chrX_-_74743299 NM_001146256 NM_001146257 NM_144969	-80523	-	AY358786 TSC_hg19_v1_chrX_-_74743270	-80574	-	AK122885 TSC_hg19_v1_chrX_-_74743140	-80722	-	BC093964 BC111949 AF490509 AK094624 NM_138703	181188	-	AY927529 AY927616 BC001220 NM_016500 TSC_hg19_v1_chrX_+_75392896 AF151079 BC051894	568999	+	TSC_hg19_v1_chrX_+_75392955 CU674612	569115	+	NM_001146256|ZDHHC15|158866|zinc finger, DHHC-type containing 15##NM_001146257|ZDHHC15|158866|zinc finger, DHHC-type containing 15##NM_144969|ZDHHC15|158866|zinc finger, DHHC-type containing 15##AY358786|ZDHHC15|158866|zinc finger, DHHC-type containing 15##AK122885|ZDHHC15|158866|zinc finger, DHHC-type containing 15##BC093964|MAGEE2|139599|melanoma antigen family E, 2##BC111949|MAGEE2|139599|melanoma antigen family E, 2##AF490509|MAGEE2|139599|melanoma antigen family E, 2##AK094624|MAGEE2|139599|melanoma antigen family E, 2##NM_138703|MAGEE2|139599|melanoma antigen family E, 2##AY927616|CXorf26|51260|chromosome X open reading frame 26##BC001220|CXorf26|51260|chromosome X open reading frame 26##NM_016500|CXorf26|51260|chromosome X open reading frame 26##BC051894|CXorf26|51260|chromosome X open reading frame 26	0.0	
chr11	46468157	46468296	reg1027779.p2	5.071	+	BC119775 BC119817 AF385590 AF498918 NM_000741 BC095546 BC137535	-60095	-	NM_001012333 TSC_hg19_v1_chr11_+_46403310	-64920	+	TSC_hg19_v1_chr11_+_46403285 X55110	-64939	+	BC045609 NM_017749 AK302808	144716	-	AL834190 TSC_hg19_v1_chr11_-_46615568 AK057896 AK000301 AB051523	147309	-	AK304530 TSC_hg19_v1_chr11_-_46615589	147377	-	BC119775|CHRM4|1132|cholinergic receptor, muscarinic 4##BC119817|CHRM4|1132|cholinergic receptor, muscarinic 4##AF385590|CHRM4|1132|cholinergic receptor, muscarinic 4##AF498918|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_000741|CHRM4|1132|cholinergic receptor, muscarinic 4##BC095546|CHRM4|1132|cholinergic receptor, muscarinic 4##BC137535|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_001012333|MDK|4192|midkine (neurite growth-promoting factor 2)##X55110|MDK|4192|midkine (neurite growth-promoting factor 2)##BC045609|AMBRA1|55626|autophagy/beclin-1 regulator 1##NM_017749|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK302808|AMBRA1|55626|autophagy/beclin-1 regulator 1##AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1##AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1	0.740427	CTCF.p2:-26:0.740
chr17	36754942	36755122	reg1026092.p2	5.071	+	TSC_hg19_v1_chr17_-_36729122 AK295027	-25910	-	TSC_hg19_v1_chr17_+_36584709 NM_001199417	-170327	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	-247169	+	BC029278 TSC_hg19_v1_chr17_-_36760969	5906	-	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	7164	-	TSC_hg19_v1_chr17_-_36831211 NM_001130677	76153	-	AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96	0.0	
chr2	21595685	21595814	reg1025610.p1	5.071	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-328820	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-328850	-	TSC_hg19_v1_chr2_-_21266818 AB587530 HM487065 M14081 M14162 BC051278	-328928	-	NM_052920	2012548	+	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	2554197	-	TSC_hg19_v1_chr2_+_24150144 BC037901	2554408	+	AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##HM487065|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14081|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14162|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC051278|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A	0.567667	CTCF.p2:-12:0.568
chr9	96588698	96588808	reg1027388.p1	5.071	+	TSC_hg19_v1_chr9_+_96339042 NM_005392 BC064613 AB014562 BC152437 AL834263	-249830	+	BC007879 TSC_hg19_v1_chr9_+_96233575	-355256	+	AK056096 NM_198841	-372880	-	TSC_hg19_v1_chr9_-_96717589 AF213356 NM_021570	128829	-	TSC_hg19_v1_chr9_-_96717638 BC064363	128886	-	TSC_hg19_v1_chr9_+_96793094 AY171233 NM_177995 BC067120 NM_001253830 BC051654	204362	+	NM_005392|PHF2|5253|PHD finger protein 2##BC064613|PHF2|5253|PHD finger protein 2##AB014562|PHF2|5253|PHD finger protein 2##BC152437|PHF2|5253|PHD finger protein 2##AL834263|PHF2|5253|PHD finger protein 2##BC007879|FAM120A|23196|family with sequence similarity 120A##AK056096|FAM120AOS|158293|family with sequence similarity 120A opposite strand##NM_198841|FAM120AOS|158293|family with sequence similarity 120A opposite strand##AF213356|BARX1|56033|BARX homeobox 1##NM_021570|BARX1|56033|BARX homeobox 1##BC064363|BARX1|56033|BARX homeobox 1##AY171233|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_177995|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC067120|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253830|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC051654|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	0.402987	CTCF.p2:-13:0.403
chr10	129514342	129514409	reg1007199.p2	5.070	+	NM_001030013	-166763	+	AK127465 NM_001039762	-519954	-	TSC_hg19_v1_chr10_+_128594020 NM_001380 BC144632 BC146857 D50857	-920344	+	NM_207426	21162	+	CU688662 TSC_hg19_v1_chr10_-_129691142	176719	-	TSC_hg19_v1_chr10_-_129691206 BC029478 NM_152311	176832	-	NM_001030013|NPS|594857|neuropeptide S##AK127465|FAM196A|642938|family with sequence similarity 196, member A##NM_001039762|FAM196A|642938|family with sequence similarity 196, member A##NM_001380|DOCK1|1793|dedicator of cytokinesis 1##BC144632|DOCK1|1793|dedicator of cytokinesis 1##BC146857|DOCK1|1793|dedicator of cytokinesis 1##D50857|DOCK1|1793|dedicator of cytokinesis 1##NM_207426|FOXI2|399823|forkhead box I2##BC029478|CLRN3|119467|clarin 3##NM_152311|CLRN3|119467|clarin 3	0.0	
chr13	96728342	96728474	reg1031577.p1	5.070	+	CU688350 TSC_hg19_v1_chr13_-_96705666 BC125233 BC125234 AF227906 BC017759 BC067807 BC111021 AK001735 BC032302 NM_020121	-22758	-	TSC_hg19_v1_chr13_+_96329409 BC047936 BC020215 BC033823 AB384852 CU690538	-398950	+	TSC_hg19_v1_chr13_+_96329401 AK312861	-399007	+	AF539426 NM_153456	14684	+	AK122639 NM_080818 AK313684	918204	-	TSC_hg19_v1_chr13_+_97794087 CR749802	1065674	+	BC125233|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC125234|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF227906|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC017759|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC067807|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC111021|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AK001735|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC032302|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##NM_020121|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC047936|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##BC033823|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##AK312861|DNAJC3|5611|DnaJ (Hsp40) homolog, subfamily C, member 3##AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##AK122639|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##NM_080818|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AK313684|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)	0.997069	CTCF.p2:7:0.997
chr18	45281062	45281187	reg1026219.p2	5.070	+	TSC_hg19_v1_chr18_-_44702736 NM_016097	-578374	-	TSC_hg19_v1_chr18_-_44702734 AK027108	-578391	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	-578435	-	BC014840 NM_005901	175801	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	176091	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	176365	-	NM_016097|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2	0.99936	CTCF.p2:-22:0.999
chr3	42623867	42623981	reg1025022.p2	5.070	+	TSC_hg19_v1_chr3_-_42623460 BC006178 BC018437 AY359041 AK292856 AK293133 AK074576 NM_001201584 NM_004206 NM_032970	-463	-	TSC_hg19_v1_chr3_+_42544134 AK298115 AK314334 L13288 BC064424 X75299 AB590664 EF577396	-79745	+	TSC_hg19_v1_chr3_+_42544108 AK294609 NM_001251883 NM_001251884 NM_001251885 NM_004624 AK293548	-79817	+	NM_016305 AF201950 TSC_hg19_v1_chr3_+_42632337	8393	+	TSC_hg19_v1_chr3_+_42632351 BC017804 AK312225 DQ891965 EU176663 BC020444	8455	+	L04288 TSC_hg19_v1_chr3_+_42642180 AK097208 BX538094 NM_005385 AK292017 BC144518 BX957218 CR749571 AB209888 BC072680 BC051318 BC035644 BC020672	18245	+	BC006178|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##BC018437|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AY359041|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK292856|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK293133|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK074576|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_001201584|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_004206|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_032970|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK298115|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK314334|VIPR1|7433|vasoactive intestinal peptide receptor 1##L13288|VIPR1|7433|vasoactive intestinal peptide receptor 1##BC064424|VIPR1|7433|vasoactive intestinal peptide receptor 1##X75299|VIPR1|7433|vasoactive intestinal peptide receptor 1##EF577396|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK294609|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251883|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251884|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251885|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_004624|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK293548|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_016305|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##AF201950|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##BC017804|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##AK312225|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##DQ891965|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##EU176663|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##BC020444|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##L04288|NKTR|4820|natural killer-tumor recognition sequence##AK097208|NKTR|4820|natural killer-tumor recognition sequence##BX538094|NKTR|4820|natural killer-tumor recognition sequence##NM_005385|NKTR|4820|natural killer-tumor recognition sequence##AK292017|NKTR|4820|natural killer-tumor recognition sequence##BC144518|NKTR|4820|natural killer-tumor recognition sequence##BX957218|NKTR|4820|natural killer-tumor recognition sequence##CR749571|NKTR|4820|natural killer-tumor recognition sequence##AB209888|NKTR|4820|natural killer-tumor recognition sequence##BC072680|NKTR|4820|natural killer-tumor recognition sequence##BC051318|NKTR|4820|natural killer-tumor recognition sequence##BC035644|NKTR|4820|natural killer-tumor recognition sequence##BC020672|NKTR|4820|natural killer-tumor recognition sequence	0.010798	
chr4	49034606	49034718	reg1028360.p2	5.070	+	AK025164 NM_025087 BC137387 BC137388	-46390	+	TSC_hg19_v1_chr4_-_48908795 CR749310 BC032808 AK298305 NM_001014446 NM_152398	-125883	-	TSC_hg19_v1_chr4_+_48833104 NM_001079840 NM_001079841 NM_017830 AK297864 AF323665 AF324350 AK000462 BC003409 NM_001079839 NM_001079842 NM_001168254 BC088361	-201411	+	AK124346 NM_001040402 NM_015115 TSC_hg19_v1_chr4_+_52709318 BC053897 AK294896 BX537944 AK027051 D87466 BC041702 AM392554 AM392637 AM392729 AM393240	3674624	+	CR749811 NM_001024611	3849123	-	BT019433 CR456810 DQ893140 DQ896425 EU176433 U29586 TSC_hg19_v1_chr4_-_52904447 AK299765 BC020709 AK289892 U31116 NM_000232	3869795	-	AK025164|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##NM_025087|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137387|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137388|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##CR749310|OCIAD2|132299|OCIA domain containing 2##BC032808|OCIAD2|132299|OCIA domain containing 2##AK298305|OCIAD2|132299|OCIA domain containing 2##NM_001014446|OCIAD2|132299|OCIA domain containing 2##NM_152398|OCIAD2|132299|OCIA domain containing 2##NM_001079840|OCIAD1|54940|OCIA domain containing 1##NM_001079841|OCIAD1|54940|OCIA domain containing 1##NM_017830|OCIAD1|54940|OCIA domain containing 1##AK297864|OCIAD1|54940|OCIA domain containing 1##AF323665|OCIAD1|54940|OCIA domain containing 1##AF324350|OCIAD1|54940|OCIA domain containing 1##AK000462|OCIAD1|54940|OCIA domain containing 1##BC003409|OCIAD1|54940|OCIA domain containing 1##NM_001079839|OCIAD1|54940|OCIA domain containing 1##NM_001079842|OCIAD1|54940|OCIA domain containing 1##NM_001168254|OCIAD1|54940|OCIA domain containing 1##BC088361|OCIAD1|54940|OCIA domain containing 1##AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##CR749811|LRRC66|339977|leucine rich repeat containing 66##NM_001024611|LRRC66|339977|leucine rich repeat containing 66##BT019433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR456810|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ893140|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ896425|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##EU176433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U29586|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK299765|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##BC020709|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK289892|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U31116|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##NM_000232|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)	0.844837	CTCF.p2:-18:0.845
chr6	53159017	53159131	reg1028643.p1	5.070	+	BC096288 BC096289 AK309881 NM_003643 D88613	-145471	-	AF176704 NM_012347	-223304	+	TSC_hg19_v1_chr6_+_52930242 AF155114 AL137520 NM_033480	-228753	+	AK125098 TSC_hg19_v1_chr6_-_53213676	54565	-	TSC_hg19_v1_chr6_-_53213736 AB209798 AL136939 BC074503 BC067123	54647	-	AK299674 AK302948 TSC_hg19_v1_chr6_-_53213749 AF338241 NM_001242828 NM_001242830 NM_001242831 NM_021814	54787	-	BC096288|GCM1|8521|glial cells missing homolog 1 (Drosophila)##BC096289|GCM1|8521|glial cells missing homolog 1 (Drosophila)##AK309881|GCM1|8521|glial cells missing homolog 1 (Drosophila)##NM_003643|GCM1|8521|glial cells missing homolog 1 (Drosophila)##D88613|GCM1|8521|glial cells missing homolog 1 (Drosophila)##AF176704|FBXO9|26268|F-box protein 9##NM_012347|FBXO9|26268|F-box protein 9##AL137520|FBXO9|26268|F-box protein 9##NM_033480|FBXO9|26268|F-box protein 9##AK125098|ELOVL5|60481|ELOVL fatty acid elongase 5##AB209798|ELOVL5|60481|ELOVL fatty acid elongase 5##AL136939|ELOVL5|60481|ELOVL fatty acid elongase 5##BC074503|ELOVL5|60481|ELOVL fatty acid elongase 5##BC067123|ELOVL5|60481|ELOVL fatty acid elongase 5##AK299674|ELOVL5|60481|ELOVL fatty acid elongase 5##AK302948|ELOVL5|60481|ELOVL fatty acid elongase 5##AF338241|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242828|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242830|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242831|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_021814|ELOVL5|60481|ELOVL fatty acid elongase 5	0.582508	CTCF.p2:-3:0.583
chr11	44505905	44506035	reg1029224.p1	5.069	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-174294	-	NM_000401 BX648142	-388211	+	BC068545 TSC_hg19_v1_chr11_+_44117272 U72263 BC013050	-388699	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	81195	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	81257	+	NM_130783	280005	+	AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_000401|EXT2|2132|exostosin 2##BX648142|EXT2|2132|exostosin 2##BC068545|EXT2|2132|exostosin 2##U72263|EXT2|2132|exostosin 2##BC013050|EXT2|2132|exostosin 2##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_130783|TSPAN18|90139|tetraspanin 18	0.936538	CTCF.p2:-10:0.921
chr12	132434352	132434462	reg1024763.p2	5.069	+	TSC_hg19_v1_chr12_+_132414244 AB528502	-20154	+	BC009505 BC019320 TSC_hg19_v1_chr12_+_132414144	-20315	+	TSC_hg19_v1_chr12_+_132413820 NM_001002019 AK074659 NM_025215 BC035964 AF318369 BC002901	-20602	+	TSC_hg19_v1_chr12_+_132434464 NM_015409	47	+	TSC_hg19_v1_chr12_+_132434504 AK096311 BC064554 BC037208	125	+	TSC_hg19_v1_chr12_+_132568827 AK126212 AK097720 AK289710	134407	+	BC009505|PUS1|80324|pseudouridylate synthase 1##BC019320|PUS1|80324|pseudouridylate synthase 1##NM_001002019|PUS1|80324|pseudouridylate synthase 1##AK074659|PUS1|80324|pseudouridylate synthase 1##NM_025215|PUS1|80324|pseudouridylate synthase 1##BC035964|PUS1|80324|pseudouridylate synthase 1##AF318369|PUS1|80324|pseudouridylate synthase 1##BC002901|PUS1|80324|pseudouridylate synthase 1##NM_015409|EP400|57634|E1A binding protein p400##AK096311|EP400|57634|E1A binding protein p400##BC064554|EP400|57634|E1A binding protein p400##BC037208|EP400|57634|E1A binding protein p400##AK126212|EP400NL|347918|EP400 N-terminal like##AK097720|EP400NL|347918|EP400 N-terminal like##AK289710|EP400NL|347918|EP400 N-terminal like	0.017388	
chr15	93155375	93155540	reg1021229.p1	5.069	+	AK057393 NM_153040	-140551	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	-218258	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-757890	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	43422	-	BC110328 TSC_hg19_v1_chr15_-_93277463	121932	-	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	288029	+	AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##BC110328|FAM174B|400451|family with sequence similarity 174, member B##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2	0.728258	CTCF.p2:-29:0.728
chr17	30842987	30843168	reg1023868.p2	5.069	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-28317	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-28480	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-29006	+	CU688936 AB385376 AB018270 BC146763 NM_015194	360818	-	TSC_hg19_v1_chr17_-_31204141 AK127942	361046	-	TSC_hg19_v1_chr17_-_31204196 BC030602	361136	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.0	
chr2	7108644	7108766	reg1032934.p1	5.069	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-51118	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-90842	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-102002	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1713498	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1869014	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	2035116	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.666358	CTCF.p2:15:0.666
chr7	117145440	117145556	reg1024158.p1	5.069	+	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	-25460	+	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	-77953	-	BC078170 AK056742 NM_003391 X07876	-182163	-	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	367983	-	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	368045	-	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	678673	+	M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit	0.882821	CTCF.p2:18:0.868
chrX	144907557	144907664	reg1026744.p1	5.069	+	NM_001144006 NM_001144008 NM_001144009 NM_001144010 BC113011 BC113012 TSC_hg19_v1_chrX_+_144903056	-4646	+	TSC_hg19_v1_chrX_+_144899439 NM_001144003 NM_001144004 NM_001144005 NM_032539 AK096278 CR627412 AK289732	-8197	+	DQ336118 DQ336119 DQ336120 DQ336121 NM_001009614	-578504	+	NM_004709 Y08902 BC113600 BC113604 HQ258719	1451	+	NM_001144064 NM_001244892	983691	+	NM_001144064 NM_001244892	988638	-	NM_001144006|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144008|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144009|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144010|SLITRK2|84631|SLIT and NTRK-like family, member 2##BC113011|SLITRK2|84631|SLIT and NTRK-like family, member 2##BC113012|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144003|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144004|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144005|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_032539|SLITRK2|84631|SLIT and NTRK-like family, member 2##AK096278|SLITRK2|84631|SLIT and NTRK-like family, member 2##CR627412|SLITRK2|84631|SLIT and NTRK-like family, member 2##AK289732|SLITRK2|84631|SLIT and NTRK-like family, member 2##DQ336118|SPANXN1|494118|SPANX family, member N1##DQ336119|SPANXN1|494118|SPANX family, member N1##DQ336120|SPANXN1|494118|SPANX family, member N1##DQ336121|SPANXN1|494118|SPANX family, member N1##NM_001009614|SPANXN1|494118|SPANX family, member N1##NM_004709|CXorf1|9142|chromosome X open reading frame 1##Y08902|CXorf1|9142|chromosome X open reading frame 1##BC113600|CXorf1|9142|chromosome X open reading frame 1##BC113604|CXorf1|9142|chromosome X open reading frame 1##HQ258719|CXorf1|9142|chromosome X open reading frame 1##NM_001144064|CXorf51A|100129239|chromosome X open reading frame 51A##NM_001244892|CXorf51B|100133053|chromosome X open reading frame 51B##NM_001144064|CXorf51A|100129239|chromosome X open reading frame 51A##NM_001244892|CXorf51B|100133053|chromosome X open reading frame 51B	0.552044	CTCF.p2:-11:0.552
chrX	55744563	55744663	reg1027192.p1	5.069	+	TSC_hg19_v1_chrX_+_55744181 NM_006064 NM_016656 AL831926 AK289407 BC034726 X90530	-425	+	BC012934 NM_198451	-94781	+	NM_201286 BC035907	-228981	-	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	514297	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	845438	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	1011078	+	NM_006064|RRAGB|10325|Ras-related GTP binding B##NM_016656|RRAGB|10325|Ras-related GTP binding B##AL831926|RRAGB|10325|Ras-related GTP binding B##AK289407|RRAGB|10325|Ras-related GTP binding B##BC034726|RRAGB|10325|Ras-related GTP binding B##X90530|RRAGB|10325|Ras-related GTP binding B##BC012934|FOXR2|139628|forkhead box R2##NM_198451|FOXR2|139628|forkhead box R2##NM_201286|USP51|158880|ubiquitin specific peptidase 51##BC035907|USP51|158880|ubiquitin specific peptidase 51##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643	0.023403	
chr10	131908100	131908217	reg1026868.p1	5.068	+	TSC_hg19_v1_chr10_-_131762539 AK097335	-145633	-	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	-146105	-	TSC_hg19_v1_chr10_+_131265507 BC000824	-642644	+	TSC_hg19_v1_chr10_-_131909090 EU250747 AK094118	923	-	TSC_hg19_v1_chr10_+_131934662 NM_001199868 NM_006541 BC005289 AK022131 AF118652	26497	+	TSC_hg19_v1_chr10_+_131934675 AF118649 AK225609	26517	+	AK097335|EBF3|253738|early B-cell factor 3##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##EU250747|LOC387723|387723|uncharacterized LOC387723##AK094118|LOC387723|387723|uncharacterized LOC387723##NM_001199868|GLRX3|10539|glutaredoxin 3##NM_006541|GLRX3|10539|glutaredoxin 3##BC005289|GLRX3|10539|glutaredoxin 3##AK022131|GLRX3|10539|glutaredoxin 3##AF118652|GLRX3|10539|glutaredoxin 3##AF118649|GLRX3|10539|glutaredoxin 3##AK225609|GLRX3|10539|glutaredoxin 3	0.0	
chr1	13370864	13370994	reg1028487.p2	5.068	+	NM_001013407 BC101342 BC101344 NM_001010889 BC130274 BC130276	-11104	+	AB464060 NM_001100631 NM_001013692	-39252	-	BC144551 NM_001136561	-186604	-	BC140755 NM_001012276	19826	-	AK124292 NM_001010890 NM_001098376 BC101343 BC137391 BC171794	50253	+	NM_001024661 NM_001099854	81726	-	NM_001013407|PRAMEF5|343068|PRAME family member 5##BC101342|PRAMEF6|440561|PRAME family member 6##BC101344|PRAMEF5|343068|PRAME family member 5##NM_001010889|PRAMEF6|440561|PRAME family member 6##BC130274|PRAMEF5|343068|PRAME family member 5##BC130276|PRAMEF5|343068|PRAME family member 5##NM_001100631|PRAMEF22|653606|PRAME family member 22##NM_001013692|PRAMEF3|401940|PRAME family member 3##BC144551|LOC440563|440563|heterogeneous nuclear ribonucleoprotein C-like##NM_001136561|LOC440563|440563|heterogeneous nuclear ribonucleoprotein C-like##BC140755|PRAMEF7|441871|PRAME family member 7##NM_001012276|PRAMEF8|391002|PRAME family member 8##AK124292|PRAMEF9|343070|PRAME family member 9##NM_001010890|PRAMEF9|343070|PRAME family member 9##NM_001098376|PRAMEF15|653619|PRAME family member 15##BC101343|PRAMEF9|343070|PRAME family member 9##BC137391|PRAMEF9|343070|PRAME family member 9##BC171794|PRAMEF9|343070|PRAME family member 9##NM_001024661|PRAMEF13|400736|PRAME family member 13##NM_001099854|PRAMEF14|729528|PRAME family member 14	1.992576	CTCF.p2:26:0.999	CTCF.p2:-53:0.993
chr20	58524276	58524423	reg1026298.p1	5.068	+	TSC_hg19_v1_chr20_+_58515434 AK304220 NM_001190827 NM_022106 BC020771 BC054002	-8861	+	TSC_hg19_v1_chr20_-_58515355 BC047502 NM_006242	-9025	-	AK125073 NM_001190826	-15531	+	NM_177980 AK055202	9126	+	BC062570 NM_021810 AK074477	47073	+	TSC_hg19_v1_chr20_+_58630979 AK091179 AX746831 NM_173644	106646	+	AK304220|C20orf177|63939|chromosome 20 open reading frame 177##NM_001190827|C20orf177|63939|chromosome 20 open reading frame 177##NM_022106|C20orf177|63939|chromosome 20 open reading frame 177##BC020771|C20orf177|63939|chromosome 20 open reading frame 177##BC054002|C20orf177|63939|chromosome 20 open reading frame 177##BC047502|PPP1R3D|5509|protein phosphatase 1, regulatory subunit 3D##NM_006242|PPP1R3D|5509|protein phosphatase 1, regulatory subunit 3D##AK125073|C20orf177|63939|chromosome 20 open reading frame 177##NM_001190826|C20orf177|63939|chromosome 20 open reading frame 177##NM_177980|CDH26|60437|cadherin 26##AK055202|CDH26|60437|cadherin 26##BC062570|CDH26|60437|cadherin 26##NM_021810|CDH26|60437|cadherin 26##AK074477|CDH26|60437|cadherin 26##AK091179|C20orf197|284756|chromosome 20 open reading frame 197##NM_173644|C20orf197|284756|chromosome 20 open reading frame 197	0.97329	CTCF.p2:1:0.973
chr5	77518065	77518206	reg1025965.p2	5.068	+	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	-446003	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	-583621	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	-583706	-	BC113045 CU691576 DQ894915 EU176289 TSC_hg19_v1_chr5_-_77590458 AK225908 U91931	72290	-	TSC_hg19_v1_chr5_-_77590488 AY623424 AK303300	72342	-	TSC_hg19_v1_chr5_-_77590495 U81504	72357	-	BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##EU446696|OTP|23440|orthopedia homeobox##DQ894915|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##EU176289|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK225908|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U91931|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AY623424|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK303300|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U81504|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit	0.666329	CTCF.p2:10:0.666
chr1	217135014	217135132	reg1028787.p1	5.067	+	AY388459 AY388458 NM_001243512 NM_001243513 AY388457 AY388460 NM_001243510 NM_001243511	-22062	-	AY388461 NM_001243514	-156365	-	HQ692853 AF117255 BC008218 AY388456 AK291647 TSC_hg19_v1_chr1_-_216896791 AB020639 AK290945 BC064700 NM_001243515 NM_001243518 NM_001243519 NM_001438	-238347	-	AB362218 AK131193 NM_001243507 NM_001243509	115197	-	AF058291 AK298851 AK291028 BX649009 NM_001243506 NM_206594 NM_206595	127893	-	NM_001243505	128122	-	AY388459|ESRRG|2104|estrogen-related receptor gamma##AY388458|ESRRG|2104|estrogen-related receptor gamma##NM_001243512|ESRRG|2104|estrogen-related receptor gamma##NM_001243513|ESRRG|2104|estrogen-related receptor gamma##AY388457|ESRRG|2104|estrogen-related receptor gamma##AY388460|ESRRG|2104|estrogen-related receptor gamma##NM_001243510|ESRRG|2104|estrogen-related receptor gamma##NM_001243511|ESRRG|2104|estrogen-related receptor gamma##AY388461|ESRRG|2104|estrogen-related receptor gamma##NM_001243514|ESRRG|2104|estrogen-related receptor gamma##HQ692853|ESRRG|2104|estrogen-related receptor gamma##AF117255|ESRRG|2104|estrogen-related receptor gamma##BC008218|ESRRG|2104|estrogen-related receptor gamma##AY388456|ESRRG|2104|estrogen-related receptor gamma##AK291647|ESRRG|2104|estrogen-related receptor gamma##AB020639|ESRRG|2104|estrogen-related receptor gamma##AK290945|ESRRG|2104|estrogen-related receptor gamma##BC064700|ESRRG|2104|estrogen-related receptor gamma##NM_001243515|ESRRG|2104|estrogen-related receptor gamma##NM_001243518|ESRRG|2104|estrogen-related receptor gamma##NM_001243519|ESRRG|2104|estrogen-related receptor gamma##NM_001438|ESRRG|2104|estrogen-related receptor gamma##AB362218|ESRRG|2104|estrogen-related receptor gamma##AK131193|ESRRG|2104|estrogen-related receptor gamma##NM_001243507|ESRRG|2104|estrogen-related receptor gamma##NM_001243509|ESRRG|2104|estrogen-related receptor gamma##AF058291|ESRRG|2104|estrogen-related receptor gamma##AK298851|ESRRG|2104|estrogen-related receptor gamma##AK291028|ESRRG|2104|estrogen-related receptor gamma##BX649009|ESRRG|2104|estrogen-related receptor gamma##NM_001243506|ESRRG|2104|estrogen-related receptor gamma##NM_206594|ESRRG|2104|estrogen-related receptor gamma##NM_206595|ESRRG|2104|estrogen-related receptor gamma##NM_001243505|ESRRG|2104|estrogen-related receptor gamma	0.0	
chr16	50316001	50316156	reg1027510.p1	5.067	+	TSC_hg19_v1_chr16_+_50308041 BC039891	-8025	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	-15602	+	TSC_hg19_v1_chr16_+_50186838 AK300918 NM_001040284 NM_001040285	-129243	+	NM_001114 D25538	5745	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	86752	-	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	266248	+	BC039891|ADCY7|113|adenylate cyclase 7##AK093706|ADCY7|113|adenylate cyclase 7##AK300918|PAPD5|64282|PAP associated domain containing 5##NM_001040284|PAPD5|64282|PAP associated domain containing 5##NM_001040285|PAPD5|64282|PAP associated domain containing 5##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7##AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)	0.0	
chr7	105400620	105400800	reg1001928.p1	5.067	+	AK300338 NM_138495	-81102	-	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	-178775	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	-228064	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	116275	-	TSC_hg19_v1_chr7_+_105517250 AK125261	116554	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	202988	+	AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1##BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##AK125261|CDHR3|222256|cadherin-related family member 3##NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3	0.0	
chr15	59592678	59592770	reg1025891.p1	5.066	+	AY642121 BC022034 AY009108 NM_033195 AK312777 AK058192	-93672	+	TSC_hg19_v1_chr15_+_59397344 NM_004701 AK001404 AL080146 BC105086 BC105112 AF087910 AK222611 AB020981 AF002822 AB587333 AM393577 BT019458 CR533527	-195353	+	TSC_hg19_v1_chr15_+_59359061 AK095327	-233646	+	AB290177 TSC_hg19_v1_chr15_-_59665055	72330	-	TSC_hg19_v1_chr15_-_59665065 AK291688	72342	-	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	72346	-	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B##BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_004701|CCNB2|9133|cyclin B2##AK001404|CCNB2|9133|cyclin B2##AL080146|CCNB2|9133|cyclin B2##BC105086|CCNB2|9133|cyclin B2##BC105112|CCNB2|9133|cyclin B2##AF087910|CCNB2|9133|cyclin B2##AK222611|CCNB2|9133|cyclin B2##AB020981|CCNB2|9133|cyclin B2##AF002822|CCNB2|9133|cyclin B2##AM393577|CCNB2|9133|cyclin B2##BT019458|CCNB2|9133|cyclin B2##CR533527|CCNB2|9133|cyclin B2##AK095327|RNF111|54778|ring finger protein 111##AB290177|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE	0.0	
chr17	1617215	1617328	reg1029847.p1	5.066	+	NM_001164407	-3610	-	TSC_hg19_v1_chr17_-_1588132 BC000579 BC064370 NM_006445	-29117	-	TSC_hg19_v1_chr17_-_1588115 AB007510 AF092565	-29163	-	BC119720 BC119721 TSC_hg19_v1_chr17_-_1619503 BX648321 BX640650	2217	-	AK298567 NM_001163673 NM_152348 AK091136 AX746799 BC114519 BC114568	2584	+	AK127946 NM_001163811 TSC_hg19_v1_chr17_+_1628006	10649	+	NM_001164407|TLCD2|727910|TLC domain containing 2##BC000579|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##BC064370|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##NM_006445|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##AB007510|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##AF092565|PRPF8|10594|PRP8 pre-mRNA processing factor 8 homolog (S. cerevisiae)##BC119720|MIR22HG|84981|MIR22 host gene (non-protein coding)##BC119721|MIR22HG|84981|MIR22 host gene (non-protein coding)##BX648321|MIR22HG|84981|MIR22 host gene (non-protein coding)##BX640650|MIR22HG|84981|MIR22 host gene (non-protein coding)##AK298567|WDR81|124997|WD repeat domain 81##NM_001163673|WDR81|124997|WD repeat domain 81##NM_152348|WDR81|124997|WD repeat domain 81##AK091136|WDR81|124997|WD repeat domain 81##BC114519|WDR81|124997|WD repeat domain 81##BC114568|WDR81|124997|WD repeat domain 81##AK127946|WDR81|124997|WD repeat domain 81##NM_001163811|WDR81|124997|WD repeat domain 81	0.020547	
chr3	157211561	157211673	reg1026054.p2	5.066	+	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	-56967	+	NM_020307 AK122738	-333103	-	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	-333708	-	CU691278 AB384625 HQ258524 AL713656 BC101660 BC113555 NM_001167917	1599	-	AK027625 NM_024621	5776	-	BC111017 AB051479 NM_001167911 NM_001167912	9514	-	AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##HQ258524|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AL713656|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC101660|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC113555|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167917|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AK027625|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_024621|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	0.972721	CTCF.p2:2:0.973
chr4	1815802	1815921	reg1027504.p1	5.066	+	TSC_hg19_v1_chr4_+_1795019 AB209441 NM_000142 NM_001163213 NM_022965	-20835	+	TSC_hg19_v1_chr4_+_1723248 AK302463 AK225631 BC106071 AF093543 AF479620 AJ243997 BC111771	-92593	+	TSC_hg19_v1_chr4_+_1723215 NM_006342	-92644	+	DQ893606 AK293572 TSC_hg19_v1_chr4_-_1857827 BC014500 BC021208 AF061025 NM_012318	41970	-	AK289697 TSC_hg19_v1_chr4_+_1873132 NM_001042424	57223	+	TSC_hg19_v1_chr4_+_1873169 BC052254 BC020545 BC032731	57337	+	AB209441|FGFR3|2261|fibroblast growth factor receptor 3##NM_000142|FGFR3|2261|fibroblast growth factor receptor 3##NM_001163213|FGFR3|2261|fibroblast growth factor receptor 3##NM_022965|FGFR3|2261|fibroblast growth factor receptor 3##AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3##NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3##DQ893606|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK293572|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC014500|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC021208|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AF061025|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##NM_012318|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK289697|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_001042424|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	0.0	
chr5	103748719	103748852	reg1027430.p1	5.066	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-850304	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-1154328	+	BC024591 NM_015216 AB463068	-1283511	+	AK308672 NM_001962 U26403	3257805	-	TSC_hg19_v1_chr5_-_107717106 AK126722	3968345	-	BC063316 NM_001163315	3969013	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.982657	CTCF.p2:1:0.983
chr13	28587077	28587257	reg1027500.p1	5.065	+	NM_001105577	-24394	-	TSC_hg19_v1_chr13_-_28543453 Y13709	-43704	-	TSC_hg19_v1_chr13_-_28543325 BC014461 NM_001265	-43859	-	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	87520	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	125499	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	482077	-	NM_001105577|PRHOXNB|646625|parahox cluster neighbor##Y13709|CDX2|1045|caudal type homeobox 2##BC014461|CDX2|1045|caudal type homeobox 2##NM_001265|CDX2|1045|caudal type homeobox 2##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	0.0	
chr4	170191346	170191460	reg1025659.p1	5.065	+	BC041023 TSC_hg19_v1_chr4_-_170077830	-113584	-	BC021973 BC033650 TSC_hg19_v1_chr4_-_169931407 AK027337 AK291756 AK299847 AL833393 NM_032783	-259945	-	TSC_hg19_v1_chr4_+_169753245 NM_001166110 AB023209	-438226	+	TSC_hg19_v1_chr4_-_170192099 BC053671	644	-	AK021429 TSC_hg19_v1_chr4_-_170192108	704	-	TSC_hg19_v1_chr4_-_170192202 NM_020870	817	-	BC041023|SH3RF1|57630|SH3 domain containing ring finger 1##BC021973|CBR4|84869|carbonyl reductase 4##BC033650|CBR4|84869|carbonyl reductase 4##AK027337|CBR4|84869|carbonyl reductase 4##AK291756|CBR4|84869|carbonyl reductase 4##AL833393|CBR4|84869|carbonyl reductase 4##NM_032783|CBR4|84869|carbonyl reductase 4##NM_001166110|PALLD|23022|palladin, cytoskeletal associated protein##AB023209|PALLD|23022|palladin, cytoskeletal associated protein##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1##AK021429|SH3RF1|57630|SH3 domain containing ring finger 1##NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1	0.0	
chr5	80595469	80595586	reg1026652.p2	5.065	+	NM_001099735 NM_001099736 NM_001825 TSC_hg19_v1_chr5_+_80529140 AK313293 BC029140 AK122769	-66379	+	AF023130 AF181250 TSC_hg19_v1_chr5_+_80256561	-338968	+	TSC_hg19_v1_chr5_+_80256463 BC126112 BC136296 BC143870 NM_006909	-339045	+	TSC_hg19_v1_chr5_-_80597338 AK096014	1798	-	AK092460 TSC_hg19_v1_chr5_-_80597373 AK096680	1845	-	NM_001131035 NM_001131036 NM_032280 AL512712 TSC_hg19_v1_chr5_+_80597439 BC032736 AK314160 BC022799 BC014841	1912	+	NM_001099735|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001099736|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001825|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK313293|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##BC029140|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK122769|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AF023130|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF181250|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC126112|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC136296|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC143870|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_006909|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AK096014|LOC100131067|100131067|uncharacterized LOC100131067##AK092460|LOC100131067|100131067|uncharacterized LOC100131067##AK096680|LOC100131067|100131067|uncharacterized LOC100131067##NM_001131035|ZCCHC9|84240|zinc finger, CCHC domain containing 9##NM_001131036|ZCCHC9|84240|zinc finger, CCHC domain containing 9##NM_032280|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AL512712|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC032736|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AK314160|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC022799|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC014841|ZCCHC9|84240|zinc finger, CCHC domain containing 9	0.857985	CTCF.p2:-4:0.858
chr12	121661579	121661691	reg1022767.p2	5.064	+	TSC_hg19_v1_chr12_+_121647948 BC035845 Y07684 BC033826 AB464108 DQ890906 DQ894059 CU689766 AK225604 BT019738 BT019739 AK301080 AF000234	-13633	+	TSC_hg19_v1_chr12_+_121647931 AK293599 AK293660 AK297704 AK308549 AK308868 BC017458	-13743	+	U83993 NM_002560	-13974	+	AF101264 TSC_hg19_v1_chr12_-_121712132 AK024748	50426	-	TSC_hg19_v1_chr12_-_121734513 BC026060 AF140507 AF425668 AK300865	72872	-	TSC_hg19_v1_chr12_-_121734549 NM_172226	72990	-	BC035845|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##Y07684|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC033826|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##DQ890906|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##DQ894059|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK225604|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BT019738|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BT019739|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK301080|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AF000234|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293599|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293660|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK297704|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308549|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308868|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC017458|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##U83993|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##NM_002560|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AF101264|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK024748|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	0.0	
chr12	49368010	49368095	reg1024959.p1	5.064	+	U81787 NM_003394 AK312906	-2454	-	TSC_hg19_v1_chr12_-_49351310 M74491	-16748	-	TSC_hg19_v1_chr12_-_49351269 AK300080	-16786	-	NM_005430	4183	+	AB527129 AB018292 BC136398 BC136399 TSC_hg19_v1_chr12_-_49393076 NM_015086 BC039264	24948	-	TSC_hg19_v1_chr12_-_49412538 AK293332 NM_001206710 AK303276 AK307994 AK310250 BC000358 AK097606 NM_001206709 NM_002733	44519	-	U81787|WNT10B|7480|wingless-type MMTV integration site family, member 10B##NM_003394|WNT10B|7480|wingless-type MMTV integration site family, member 10B##AK312906|WNT10B|7480|wingless-type MMTV integration site family, member 10B##M74491|ARF3|377|ADP-ribosylation factor 3##NM_005430|WNT1|7471|wingless-type MMTV integration site family, member 1##AB018292|DDN|23109|dendrin##BC136398|DDN|23109|dendrin##BC136399|DDN|23109|dendrin##NM_015086|DDN|23109|dendrin##BC039264|DDN|23109|dendrin##AK293332|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206710|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK303276|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK307994|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK310250|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##BC000358|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK097606|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206709|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_002733|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit	0.895977	CTCF.p2:-3:0.791
chr16	73082136	73082227	reg1028859.p2	5.064	+	TSC_hg19_v1_chr16_-_72991733 BC029653	-90476	-	TSC_hg19_v1_chr16_+_72699031 AK021563	-383117	+	AK122925 NM_001160213	-875833	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	40	-	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	10405	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	1248512	+	BC029653|ZFHX3|463|zinc finger homeobox 3##AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.0	
chr2	121194918	121195050	reg1024005.p1	5.064	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-91187	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-184480	+	AK127675 AK304588 TSC_hg19_v1_chr2_+_121010450 M35416	-184540	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	359909	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	847789	-	TSC_hg19_v1_chr2_-_122159142 CR749627	964171	-	BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK127675|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK304588|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##M35416|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1	0.990219	CTCF.p2:-8:0.355	CTCF.p2:-9:0.635
chr2	25438842	25438992	reg1027093.p2	5.064	+	NM_000939 NM_001035256	-47359	-	TSC_hg19_v1_chr2_+_25264954 NM_014971 AB023170	-173940	+	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	-244050	-	TSC_hg19_v1_chr2_-_25466801 BC018214	27891	-	TSC_hg19_v1_chr2_-_25467080 BC023612	28218	-	TSC_hg19_v1_chr2_-_25468920 AK025230	30061	-	NM_000939|POMC|5443|proopiomelanocortin##NM_001035256|POMC|5443|proopiomelanocortin##NM_014971|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AB023170|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC018214|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.0	
chr3	33186102	33186254	reg1028801.p2	5.064	+	TSC_hg19_v1_chr3_+_33155562 AJ006470 CU679079 DQ893221 DQ896550	-30605	+	TSC_hg19_v1_chr3_+_33155553 NM_006371 AK314719 AK298250 AK075401 AK126433 AK001634 AK091772 BC008745 AK097650 AK092990	-30678	+	AK223091 AK300753 TSC_hg19_v1_chr3_-_33138639 NM_000404 NM_001135602	-47497	-	AB011099 NM_015551	74528	-	TSC_hg19_v1_chr3_+_33318965 AK001271 NM_012157 AK302218 NM_001171713 AK303764 AK299665 AK294209 AF174589 AK316229 AK001438 AK298967 AK297534 AF186273 BC031556	132772	+	AK023274 AF198487 TSC_hg19_v1_chr3_-_33481564	295358	-	AJ006470|CRTAP|10491|cartilage associated protein##DQ893221|CRTAP|10491|cartilage associated protein##DQ896550|CRTAP|10491|cartilage associated protein##NM_006371|CRTAP|10491|cartilage associated protein##AK314719|CRTAP|10491|cartilage associated protein##AK298250|CRTAP|10491|cartilage associated protein##AK075401|CRTAP|10491|cartilage associated protein##AK126433|CRTAP|10491|cartilage associated protein##AK001634|CRTAP|10491|cartilage associated protein##AK091772|CRTAP|10491|cartilage associated protein##BC008745|CRTAP|10491|cartilage associated protein##AK097650|CRTAP|10491|cartilage associated protein##AK092990|CRTAP|10491|cartilage associated protein##AK223091|GLB1|2720|galactosidase, beta 1##AK300753|GLB1|2720|galactosidase, beta 1##NM_000404|GLB1|2720|galactosidase, beta 1##NM_001135602|GLB1|2720|galactosidase, beta 1##AB011099|SUSD5|26032|sushi domain containing 5##NM_015551|SUSD5|26032|sushi domain containing 5##AK001271|FBXL2|25827|F-box and leucine-rich repeat protein 2##NM_012157|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK302218|FBXL2|25827|F-box and leucine-rich repeat protein 2##NM_001171713|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK303764|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK299665|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK294209|FBXL2|25827|F-box and leucine-rich repeat protein 2##AF174589|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK316229|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK001438|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK298967|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK297534|FBXL2|25827|F-box and leucine-rich repeat protein 2##AF186273|FBXL2|25827|F-box and leucine-rich repeat protein 2##BC031556|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK023274|UBP1|7342|upstream binding protein 1 (LBP-1a)##AF198487|UBP1|7342|upstream binding protein 1 (LBP-1a)	0.925328	CTCF.p2:-16:0.925
chrX	1626638	1626802	reg1028496.p1	5.064	+	AK301844 NM_001173473	-54069	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-54919	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-115751	-	BC043610 GQ280263 NM_178129 AK126147	29318	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	83809	+	NM_004043 U11090	87627	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr11	35738740	35738859	reg1028339.p1	5.063	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-54126	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-54349	+	TSC_hg19_v1_chr11_+_35684404 BC013166 NM_017583	-54426	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	226812	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	572154	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	572187	-	DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##BC013166|TRIM44|54765|tripartite motif containing 44##NM_017583|TRIM44|54765|tripartite motif containing 44##BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9	0.968818	CTCF.p2:1:0.969
chr11	72064035	72064216	reg1026662.p1	5.063	+	TSC_hg19_v1_chr11_-_71955221 AK290645 NM_005169	-108890	-	BC041564 TSC_hg19_v1_chr11_-_71955201	-108923	-	Y14385 BC140853 NM_001567	-128273	+	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	81330	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	81451	-	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	81525	-	AK290645|PHOX2A|401|paired-like homeobox 2a##NM_005169|PHOX2A|401|paired-like homeobox 2a##BC041564|PHOX2A|401|paired-like homeobox 2a##Y14385|INPPL1|3636|inositol polyphosphate phosphatase-like 1##BC140853|INPPL1|3636|inositol polyphosphate phosphatase-like 1##NM_001567|INPPL1|3636|inositol polyphosphate phosphatase-like 1##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)	0.0	
chr12	92899268	92899361	reg1025514.p1	5.063	+	AJ845168 NM_001025232	-77391	-	AJ845165 AJ845166 NM_001025233	-81580	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-359671	-	NM_001037671 NM_001178097	197304	+	NM_001004330 AK128530	230973	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	423624	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.016817	
chr3	5025903	5026078	reg1027264.p1	5.063	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-4636	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	-4809	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	-4874	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	137965	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	138101	+	TSC_hg19_v1_chr3_+_5229344 AK298511	203337	+	AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	0.0	
chr6	117996443	117996570	reg1022595.p2	5.063	+	TSC_hg19_v1_chr6_-_117996469 AK125564	-68	-	TSC_hg19_v1_chr6_-_117923706 NM_001017408 NM_020399	-72792	-	TSC_hg19_v1_chr6_-_117923682 AF450008	-72820	-	NM_138459 BC066910 TSC_hg19_v1_chr6_+_117996631	118	+	TSC_hg19_v1_chr6_+_117996651 BC150654 BC150655 AK125119	141	+	BC110325 TSC_hg19_v1_chr6_+_117996661 BC063794	155	+	NM_001017408|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##NM_020399|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AF450008|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##NM_138459|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC066910|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150654|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150655|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##AK125119|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC110325|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC063794|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	0.417227	CTCF.p2:-3:0.417
chr11	65756841	65756972	reg1001268.p2	5.062	+	NM_005146 TSC_hg19_v1_chr11_+_65729203 AK223016 AK293200 AK297589 AK309104 AK298184 BC001058 AB006198 AF353625 DQ891694 EU176645 BT006637 Y14314	-27637	+	AK057442 BC104021 BC104022 BC104023 NM_152762	-43792	+	TSC_hg19_v1_chr11_+_65686920 BC010025 AB463581 CU679579 EU446936 X96506	-69947	+	TSC_hg19_v1_chr11_+_65769409 AF068235 NM_001143985 NM_003860	12573	+	AK094129 TSC_hg19_v1_chr11_-_65769629 BC005131 AK311891 NM_001242481 NM_001242482 NM_001242483 NM_001242484 NM_001242485 NM_001242486 NM_032325	12724	-	TSC_hg19_v1_chr11_+_65769774 BC107702	12913	+	NM_005146|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK223016|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK293200|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK297589|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK298184|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BC001058|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AB006198|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AF353625|SART1|9092|squamous cell carcinoma antigen recognized by T cells##DQ891694|SART1|9092|squamous cell carcinoma antigen recognized by T cells##EU176645|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BT006637|SART1|9092|squamous cell carcinoma antigen recognized by T cells##Y14314|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK057442|TSGA10IP|254187|testis specific, 10 interacting protein##BC104021|TSGA10IP|254187|testis specific, 10 interacting protein##BC104022|TSGA10IP|254187|testis specific, 10 interacting protein##BC104023|TSGA10IP|254187|testis specific, 10 interacting protein##NM_152762|TSGA10IP|254187|testis specific, 10 interacting protein##BC010025|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##EU446936|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##X96506|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##AF068235|BANF1|8815|barrier to autointegration factor 1##NM_001143985|BANF1|8815|barrier to autointegration factor 1##NM_003860|BANF1|8815|barrier to autointegration factor 1##AK094129|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##BC005131|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##AK311891|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242481|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242482|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242483|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242484|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242485|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242486|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_032325|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##BC107702|BANF1|8815|barrier to autointegration factor 1	0.667626	CTCF.p2:7:0.668
chr16	27367122	27367239	reg1026296.p2	5.062	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-25836	+	TSC_hg19_v1_chr16_+_27325301 BC110343 AK223591 X52425	-41862	+	TSC_hg19_v1_chr16_+_27325254 AK314863 NM_000418 NM_001008699 AK303255	-41926	+	AK292663 NM_181078 NM_181079 AK312825	46307	+	NM_021798 AY358826 AF254067	71424	+	TSC_hg19_v1_chr16_-_27561218 BX648143	194038	-	BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BC110343|IL4R|3566|interleukin 4 receptor##AK223591|IL4R|3566|interleukin 4 receptor##X52425|IL4R|3566|interleukin 4 receptor##AK314863|IL4R|3566|interleukin 4 receptor##NM_000418|IL4R|3566|interleukin 4 receptor##NM_001008699|IL4R|3566|interleukin 4 receptor##AK303255|IL4R|3566|interleukin 4 receptor##AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.441464	CTCF.p2:-21:0.441
chr3	119317319	119317499	reg1029990.p2	5.062	+	NM_001206960 NM_001206961 NM_015900 AK301880 AK222705 AK313519 BC035347 BC047703 U37591 AF035268 AF035269 AB527604 CU690470	-682	+	BC063883 NM_001125 TSC_hg19_v1_chr3_+_119298606	-18844	+	TSC_hg19_v1_chr3_+_119298355 AK304560 AK291787	-19014	+	CU692240 AF204173 NM_022135 AK314819 BC044929	61943	-	TSC_hg19_v1_chr3_-_119396232 AK312143 BC105280 BC010933 L77701 NM_005694 BC108317	78837	-	TSC_hg19_v1_chr3_+_119421876 AF440403 BC035248 CR749242 NM_033364 AF497717 AK055558 BC126394 AK302699 AK309317 AK294413 AK303997 AK289914 HQ258654	104493	+	NM_001206960|PLA1A|51365|phospholipase A1 member A##NM_001206961|PLA1A|51365|phospholipase A1 member A##NM_015900|PLA1A|51365|phospholipase A1 member A##AK301880|PLA1A|51365|phospholipase A1 member A##AK222705|PLA1A|51365|phospholipase A1 member A##AK313519|PLA1A|51365|phospholipase A1 member A##BC035347|PLA1A|51365|phospholipase A1 member A##BC047703|PLA1A|51365|phospholipase A1 member A##U37591|PLA1A|51365|phospholipase A1 member A##AF035268|PLA1A|51365|phospholipase A1 member A##AF035269|PLA1A|51365|phospholipase A1 member A##BC063883|ADPRH|141|ADP-ribosylarginine hydrolase##NM_001125|ADPRH|141|ADP-ribosylarginine hydrolase##AK304560|ADPRH|141|ADP-ribosylarginine hydrolase##AK291787|ADPRH|141|ADP-ribosylarginine hydrolase##AF204173|POPDC2|64091|popeye domain containing 2##NM_022135|POPDC2|64091|popeye domain containing 2##AK314819|POPDC2|64091|popeye domain containing 2##BC044929|POPDC2|64091|popeye domain containing 2##AK312143|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC105280|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC010933|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##L77701|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_005694|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC108317|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##AF440403|C3orf15|89876|chromosome 3 open reading frame 15##BC035248|C3orf15|89876|chromosome 3 open reading frame 15##CR749242|C3orf15|89876|chromosome 3 open reading frame 15##NM_033364|C3orf15|89876|chromosome 3 open reading frame 15##AF497717|C3orf15|89876|chromosome 3 open reading frame 15##AK055558|C3orf15|89876|chromosome 3 open reading frame 15##BC126394|C3orf15|89876|chromosome 3 open reading frame 15##AK302699|C3orf15|89876|chromosome 3 open reading frame 15##AK309317|C3orf15|89876|chromosome 3 open reading frame 15##AK294413|C3orf15|89876|chromosome 3 open reading frame 15##AK303997|C3orf15|89876|chromosome 3 open reading frame 15##AK289914|C3orf15|89876|chromosome 3 open reading frame 15##HQ258654|C3orf15|89876|chromosome 3 open reading frame 15	0.0	
chr5	89643400	89643580	reg1028202.p2	5.062	+	AL833268 AL833274 NM_001131005 NM_001193347	-1443596	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1458226	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-1458370	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	62049	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	126692	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	127088	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr8	145539721	145539836	reg1024473.p1	5.062	+	TSC_hg19_v1_chr8_+_145515472 AB463721 BT007351 DQ893859	-24324	+	TSC_hg19_v1_chr8_+_145515289 AK290975 BC014638	-24467	+	AK222497 TSC_hg19_v1_chr8_+_145515286	-24493	+	DQ892286 DQ895486 TSC_hg19_v1_chr8_-_145550350 AB057815	10570	-	TSC_hg19_v1_chr8_-_145550516 BC150649	10743	-	TSC_hg19_v1_chr8_-_145550553 AF059202 BC015762 BC023565 NM_012079	10796	-	BT007351|HSF1|3297|heat shock transcription factor 1##DQ893859|HSF1|3297|heat shock transcription factor 1##AK290975|HSF1|3297|heat shock transcription factor 1##BC014638|HSF1|3297|heat shock transcription factor 1##AK222497|HSF1|3297|heat shock transcription factor 1##DQ892286|DGAT1|8694|diacylglycerol O-acyltransferase 1##DQ895486|DGAT1|8694|diacylglycerol O-acyltransferase 1##AB057815|DGAT1|8694|diacylglycerol O-acyltransferase 1##BC150649|DGAT1|8694|diacylglycerol O-acyltransferase 1##AF059202|DGAT1|8694|diacylglycerol O-acyltransferase 1##BC015762|DGAT1|8694|diacylglycerol O-acyltransferase 1##BC023565|DGAT1|8694|diacylglycerol O-acyltransferase 1##NM_012079|DGAT1|8694|diacylglycerol O-acyltransferase 1	0.120281	
chr13	21635754	21635935	reg1028466.p2	5.061	+	TSC_hg19_v1_chr13_-_21635719 NM_014572	-128	-	TSC_hg19_v1_chr13_-_21635685 BC127671 AF207547 AB209897 BC071572	-179	-	TSC_hg19_v1_chr13_-_21476909 NM_022459	-158907	-	NM_005870 TSC_hg19_v1_chr13_+_21714679	78823	+	BC030836 TSC_hg19_v1_chr13_+_21714684	78843	+	TSC_hg19_v1_chr13_+_21714721 AF153608 U78303 AK311748 AY550970 U96915 AB464207 CR457035 CU689040 EU446760	78884	+	NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##NM_022459|XPO4|64328|exportin 4##NM_005870|SAP18|10284|Sin3A-associated protein, 18kDa##BC030836|SAP18|10284|Sin3A-associated protein, 18kDa##AF153608|SAP18|10284|Sin3A-associated protein, 18kDa##U78303|SAP18|10284|Sin3A-associated protein, 18kDa##AK311748|SAP18|10284|Sin3A-associated protein, 18kDa##AY550970|SAP18|10284|Sin3A-associated protein, 18kDa##U96915|SAP18|10284|Sin3A-associated protein, 18kDa##CR457035|SAP18|10284|Sin3A-associated protein, 18kDa##EU446760|SAP18|10284|Sin3A-associated protein, 18kDa	0.0	
chr16	11402790	11402909	reg1028919.p1	5.061	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-27707	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	-32529	-	NM_021247	-35398	-	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	36445	+	TSC_hg19_v1_chr16_+_11439315 BC013040	36469	+	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	277338	-	BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2##NM_021247|PRM3|58531|protamine 3##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor	0.801421	CTCF.p2:25:0.801
chr16	14580866	14580970	reg1027724.p2	5.061	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-286720	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-300400	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-415832	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	143110	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	143215	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	145821	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.0	
chr17	78865876	78866056	reg1025076.p2	5.061	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-347148	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-347317	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-415639	-	TSC_hg19_v1_chr17_+_78935064 BC073898	69166	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	99675	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	99728	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.0	
chr2	137494858	137494946	reg1027381.p1	5.061	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-619226	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-621104	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-751686	-	TSC_hg19_v1_chr2_+_137523114 AK299929	28214	+	NM_001080427	253559	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1227032	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.998014	CTCF.p2:30:0.998
chr21	44631412	44631479	reg1027600.p2	5.061	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-42271	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-103761	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-103820	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	214544	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	215550	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	447917	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.968661	CTCF.p2:10:0.920
chr4	166034306	166034441	reg1026252.p2	5.061	+	TSC_hg19_v1_chr4_-_166034013 NM_001100389	-348	-	CU690322 BC036301 BX648915 BX538029 TSC_hg19_v1_chr4_-_166033990	-412	-	AK093201 AX747987 NM_152620	-81223	+	NM_007246 TSC_hg19_v1_chr4_+_166128778 BC022503	94410	+	TSC_hg19_v1_chr4_+_166128825 BC036468 AF059569 AK315372 DQ893638 DQ895588 CU690356	94552	+	NM_001161521 NM_001161522 AK294103 BX647776	96805	+	NM_001100389|TMEM192|201931|transmembrane protein 192##BC036301|TMEM192|201931|transmembrane protein 192##BX648915|TMEM192|201931|transmembrane protein 192##BX538029|TMEM192|201931|transmembrane protein 192##AK093201|TRIM60|166655|tripartite motif containing 60##NM_152620|TRIM60|166655|tripartite motif containing 60##NM_007246|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BC022503|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BC036468|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AF059569|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AK315372|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##DQ893638|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##DQ895588|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##NM_001161521|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##NM_001161522|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##AK294103|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BX647776|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	0.019103	
chr6	152085571	152085680	reg1027768.p1	5.061	+	NM_001122742 U68068 AK309580 AB588629 AB588630	-73932	+	NM_025059 BC060803 BC035003 AK225330 AK026958	-270407	+	AK298490 TSC_hg19_v1_chr6_+_151773653 AK310840 AL110241 BC011348 CU679902	-311983	+	NM_001122741 AK293019 AK313644	41198	+	NM_001122740 U68067	42828	+	X03635 AK304833 M69297 AF258449 AF258450 AF258451 NM_000125 TSC_hg19_v1_chr6_+_152128813 BC128573 BC128574 EU930361 AB587448 AB307713 AY750962 JF810888 U47678	43241	+	NM_001122742|ESR1|2099|estrogen receptor 1##U68068|ESR1|2099|estrogen receptor 1##AK309580|ESR1|2099|estrogen receptor 1##AB588629|ESR1|2099|estrogen receptor 1##AB588630|ESR1|2099|estrogen receptor 1##NM_025059|C6orf97|80129|chromosome 6 open reading frame 97##BC060803|C6orf97|80129|chromosome 6 open reading frame 97##BC035003|C6orf97|80129|chromosome 6 open reading frame 97##AK225330|C6orf97|80129|chromosome 6 open reading frame 97##AK026958|C6orf97|80129|chromosome 6 open reading frame 97##AK298490|C6orf211|79624|chromosome 6 open reading frame 211##AK310840|C6orf211|79624|chromosome 6 open reading frame 211##AL110241|C6orf211|79624|chromosome 6 open reading frame 211##BC011348|C6orf211|79624|chromosome 6 open reading frame 211##NM_001122741|ESR1|2099|estrogen receptor 1##AK293019|ESR1|2099|estrogen receptor 1##AK313644|ESR1|2099|estrogen receptor 1##NM_001122740|ESR1|2099|estrogen receptor 1##U68067|ESR1|2099|estrogen receptor 1##X03635|ESR1|2099|estrogen receptor 1##AK304833|ESR1|2099|estrogen receptor 1##M69297|ESR1|2099|estrogen receptor 1##AF258449|ESR1|2099|estrogen receptor 1##AF258450|ESR1|2099|estrogen receptor 1##AF258451|ESR1|2099|estrogen receptor 1##NM_000125|ESR1|2099|estrogen receptor 1##BC128573|ESR1|2099|estrogen receptor 1##BC128574|ESR1|2099|estrogen receptor 1##AB307713|ESR1|2099|estrogen receptor 1##AY750962|ESR1|2099|estrogen receptor 1##JF810888|ESR1|2099|estrogen receptor 1##U47678|ESR1|2099|estrogen receptor 1	0.099617	
chr10	13826190	13826288	reg1026394.p1	5.060	+	TSC_hg19_v1_chr10_-_13749648 AK057828	-76550	-	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-197252	+	NM_003675 TSC_hg19_v1_chr10_+_13628948	-197296	+	TSC_hg19_v1_chr10_-_14050453 AK001072	224253	-	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	546611	-	TSC_hg19_v1_chr10_-_14646259 BC064407	820078	-	AK057828|FRMD4A|55691|FERM domain containing 4A##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK001072|FRMD4A|55691|FERM domain containing 4A##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B	0.0	
chr10	71696096	71696163	reg1008669.p2	5.060	+	TSC_hg19_v1_chr10_+_71562275 M59217	-133838	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	-134440	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	-134472	+	NM_018649	116227	+	TSC_hg19_v1_chr10_+_71812601 BC016172 AK022776 AK131057 AF151534 AF336304 AK022475	116468	+	TSC_hg19_v1_chr10_-_71892569 AK027403	196419	-	M59217|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##NM_018649|H2AFY2|55506|H2A histone family, member Y2##BC016172|H2AFY2|55506|H2A histone family, member Y2##AK022776|H2AFY2|55506|H2A histone family, member Y2##AK131057|H2AFY2|55506|H2A histone family, member Y2##AF151534|H2AFY2|55506|H2A histone family, member Y2##AF336304|H2AFY2|55506|H2A histone family, member Y2##AK022475|H2AFY2|55506|H2A histone family, member Y2##AK027403|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2	0.025849	
chr4	113207020	113207200	reg1029440.p1	5.060	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	-109	-	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	-54026	+	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	-140496	+	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	11417	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	230222	-	TSC_hg19_v1_chr4_-_113558057 BC044799 BC028584 AK002193	350936	-	BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2##BC044799|C4orf21|55345|chromosome 4 open reading frame 21##BC028584|C4orf21|55345|chromosome 4 open reading frame 21##AK002193|C4orf21|55345|chromosome 4 open reading frame 21	0.0	
chr5	132701146	132701264	reg1026695.p1	5.060	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-268314	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-272802	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-295102	+	TSC_hg19_v1_chr5_-_132948202 AK055684	246994	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	247033	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	603170	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	1.045573	CTCF.p2:-28:0.978
chr6_mcf_hap5	288582	288669	reg1023015.p1	5.060	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999391	CTCF.p2:1:0.999
chr7	41921481	41921661	reg1025342.p2	5.060	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-178886	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1746962	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1747040	+	NM_000168	355046	-	TSC_hg19_v1_chr7_-_42276797 AK308429	355224	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	1030018	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.0	
chrUn_gl000246	13331	13477	reg1030765.p2	5.060	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chrX	118824853	118825034	reg1025760.p1	5.060	+	BC047878 BC068514 BC040379 AY208891 NM_001173487 NM_017544	-85115	-	EF165090 EF165091 EF165093 AJ011812 EF158333 EF216688 EF216689 NM_001173488	-97961	-	BC042021 NM_181777	-110646	+	D50918 AB384441 CU679289 CU680116 CU690318 TSC_hg19_v1_chrX_-_118827108 BC069231	2142	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	2189	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	2236	-	BC047878|NKRF|55922|NFKB repressing factor##BC068514|NKRF|55922|NFKB repressing factor##BC040379|NKRF|55922|NFKB repressing factor##AY208891|NKRF|55922|NFKB repressing factor##NM_001173487|NKRF|55922|NFKB repressing factor##NM_017544|NKRF|55922|NFKB repressing factor##EF165090|NKRF|55922|NFKB repressing factor##EF165091|NKRF|55922|NFKB repressing factor##EF165093|NKRF|55922|NFKB repressing factor##AJ011812|NKRF|55922|NFKB repressing factor##EF158333|NKRF|55922|NFKB repressing factor##EF216688|NKRF|55922|NFKB repressing factor##EF216689|NKRF|55922|NFKB repressing factor##NM_001173488|NKRF|55922|NFKB repressing factor##BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D50918|SEPT6|23157|septin 6##BC069231|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6	0.0	
chr16	66785693	66785846	reg1027460.p1	5.059	+	BC010928 TSC_hg19_v1_chr16_-_66785513 AK295049 NM_006141	-207	-	TSC_hg19_v1_chr16_-_66785505 AK304233 AF035812 BC025959 AK291766 AK303031 BX648863	-277	-	TSC_hg19_v1_chr16_-_66730647 BC093679 AF479814 AF521889 AF521890 NM_178818 NM_181521	-55137	-	AK093213 AX747993 NM_001136505	49753	-	DQ892741 DQ895987 BC000480 BC013301 TSC_hg19_v1_chr16_-_66864855 AY197612 AK298159 AL136798	79063	-	TSC_hg19_v1_chr16_-_66864880 U50939 AK307677 AK097680 AK312784 NM_001018159 NM_001018160 NM_003905	79117	-	BC010928|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK295049|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##NM_006141|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK304233|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AF035812|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC025959|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK291766|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK303031|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BX648863|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC093679|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF479814|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521889|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521890|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_178818|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_181521|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AK093213|CCDC79|283847|coiled-coil domain containing 79##NM_001136505|CCDC79|283847|coiled-coil domain containing 79##DQ892741|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##DQ895987|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##BC000480|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##BC013301|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AY197612|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK298159|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AL136798|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##U50939|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK307677|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK097680|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK312784|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##NM_001018159|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##NM_001018160|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##NM_003905|NAE1|8883|NEDD8 activating enzyme E1 subunit 1	0.605884	CTCF.p2:18:0.606
chr17	7620647	7620778	reg1029201.p2	5.059	+	AK314841 TSC_hg19_v1_chr17_+_7608520 BC042944 NM_001406 U57001 AK027329	-12233	+	AY766323 DQ431240 NM_001143992 NM_018081 AK001247 AK225273 AK225411 AK303246 BC002336	-28977	+	AB082923 DQ648883 DQ648884 DQ648885 BC003596 M14695 M14694 AF307851 TSC_hg19_v1_chr17_-_7590807 DQ186648 DQ186649 AY627884 DQ286964 FJ207420 X02469 AK225838 AK297462 AK303277 AK312568 AK297927 DQ191317 NM_000546 NM_001126112 NM_001126113 NM_001126114	-29916	-	NM_020877 AB385476 AB463017	2333	+	TSC_hg19_v1_chr17_+_7741696 BC067879	120961	+	AB002344 NM_001080424	122521	+	AK314841|EFNB3|1949|ephrin-B3##BC042944|EFNB3|1949|ephrin-B3##NM_001406|EFNB3|1949|ephrin-B3##U57001|EFNB3|1949|ephrin-B3##AK027329|EFNB3|1949|ephrin-B3##AY766323|WRAP53|55135|WD repeat containing, antisense to TP53##DQ431240|WRAP53|55135|WD repeat containing, antisense to TP53##NM_001143992|WRAP53|55135|WD repeat containing, antisense to TP53##NM_018081|WRAP53|55135|WD repeat containing, antisense to TP53##AK001247|WRAP53|55135|WD repeat containing, antisense to TP53##AK225273|WRAP53|55135|WD repeat containing, antisense to TP53##AK225411|WRAP53|55135|WD repeat containing, antisense to TP53##AK303246|WRAP53|55135|WD repeat containing, antisense to TP53##BC002336|WRAP53|55135|WD repeat containing, antisense to TP53##AB082923|TP53|7157|tumor protein p53##DQ648883|TP53|7157|tumor protein p53##DQ648884|TP53|7157|tumor protein p53##DQ648885|TP53|7157|tumor protein p53##BC003596|TP53|7157|tumor protein p53##M14695|TP53|7157|tumor protein p53##M14694|TP53|7157|tumor protein p53##AF307851|TP53|7157|tumor protein p53##DQ186648|TP53|7157|tumor protein p53##DQ186649|TP53|7157|tumor protein p53##AY627884|TP53|7157|tumor protein p53##DQ286964|TP53|7157|tumor protein p53##FJ207420|TP53|7157|tumor protein p53##X02469|TP53|7157|tumor protein p53##AK225838|TP53|7157|tumor protein p53##AK297462|TP53|7157|tumor protein p53##AK303277|TP53|7157|tumor protein p53##AK312568|TP53|7157|tumor protein p53##AK297927|TP53|7157|tumor protein p53##DQ191317|TP53|7157|tumor protein p53##NM_000546|TP53|7157|tumor protein p53##NM_001126112|TP53|7157|tumor protein p53##NM_001126113|TP53|7157|tumor protein p53##NM_001126114|TP53|7157|tumor protein p53##NM_020877|DNAH2|146754|dynein, axonemal, heavy chain 2##AB002344|KDM6B|23135|lysine (K)-specific demethylase 6B##NM_001080424|KDM6B|23135|lysine (K)-specific demethylase 6B	0.997656	CTCF.p2:6:0.998
chr2	109815878	109815984	reg1025584.p1	5.059	+	NM_001099289 DQ307286	-69868	+	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	-210184	-	TSC_hg19_v1_chr2_-_109605623 AK296936	-210312	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	555550	-	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	555794	-	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	556014	+	NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##AK296936|EDAR|10913|ectodysplasin A receptor##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57	0.0	
chr6	56820757	56820921	reg1020696.p3	5.059	+	BC036119 TSC_hg19_v1_chr6_+_56819931 AK054724	-833	+	TSC_hg19_v1_chr6_+_56819725 NM_152731	-1100	+	AK299898 TSC_hg19_v1_chr6_-_56716715	-104125	-	TSC_hg19_v1_chr6_+_56911328 BC041125 NM_020931	90507	+	TSC_hg19_v1_chr6_+_56911464 BC012011 BC029372 AK295519 AK290988 AB587556 CU691960	90648	+	TSC_hg19_v1_chr6_+_56954826 AY055204 NM_001031623 NM_015555	133975	+	BC036119|BEND6|221336|BEN domain containing 6##AK054724|BEND6|221336|BEN domain containing 6##NM_152731|BEND6|221336|BEN domain containing 6##AK299898|DST|667|dystonin##BC041125|KIAA1586|57691|KIAA1586##NM_020931|KIAA1586|57691|KIAA1586##BC012011|KIAA1586|57691|KIAA1586##BC029372|KIAA1586|57691|KIAA1586##AK295519|KIAA1586|57691|KIAA1586##AK290988|KIAA1586|57691|KIAA1586##AY055204|ZNF451|26036|zinc finger protein 451##NM_001031623|ZNF451|26036|zinc finger protein 451##NM_015555|ZNF451|26036|zinc finger protein 451	0.039863	
chr8	8610530	8610710	reg1023878.p1	5.059	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	-50922	+	AK122582 NM_001080826	-371398	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-434732	-	TSC_hg19_v1_chr8_-_8751060 NM_004225	140318	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	249745	+	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	249885	+	AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1	0.0	
chr9	124857653	124857788	reg1029584.p1	5.059	+	AF521886 NM_001139442 NM_194252	-1836	-	TSC_hg19_v1_chr9_-_124855560 AK125178	-2132	-	AY032952 NM_138709	-352657	+	TSC_hg19_v1_chr9_-_124922039 BC001016 AF044953	64292	-	TSC_hg19_v1_chr9_-_124922059 AK314135 AK301520 NM_014222	64353	-	AK128877 NM_198469 BC133690 AK302081 BC143440	64487	+	AF521886|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_001139442|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_194252|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##BC001016|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AF044953|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AK314135|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##NM_014222|NDUFA8|4702|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19kDa##AK128877|MORN5|254956|MORN repeat containing 5##NM_198469|MORN5|254956|MORN repeat containing 5##BC133690|MORN5|254956|MORN repeat containing 5##AK302081|MORN5|254956|MORN repeat containing 5##BC143440|MORN5|254956|MORN repeat containing 5	0.912539	CTCF.p2:-8:0.913
chr1	11424387	11424470	reg1028784.p2	5.058	+	TSC_hg19_v1_chr1_+_11333566 BC004468 BT006832	-90883	+	TSC_hg19_v1_chr1_+_11333254 AK222808 NM_013319 AK074890 AF117064	-91112	+	TSC_hg19_v1_chr1_-_11322609 NM_004958	-101821	-	TSC_hg19_v1_chr1_+_11539211 AB593117 AK311332 AB037758 NM_020780	114807	+	AB463629 CR542110 CU692940 DQ892848 DQ892849 DQ896095 TSC_hg19_v1_chr1_-_11714417	289978	-	AK055344 NM_183412	290003	+	BC004468|UBIAD1|29914|UbiA prenyltransferase domain containing 1##BT006832|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK222808|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_013319|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK074890|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AF117064|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_004958|MTOR|2475|mechanistic target of rapamycin (serine/threonine kinase)##AB593117|PTCHD2|57540|patched domain containing 2##AB037758|PTCHD2|57540|patched domain containing 2##NM_020780|PTCHD2|57540|patched domain containing 2##CR542110|FBXO2|26232|F-box protein 2##DQ892848|FBXO2|26232|F-box protein 2##DQ892849|FBXO2|26232|F-box protein 2##DQ896095|FBXO2|26232|F-box protein 2##AK055344|FBXO44|93611|F-box protein 44##NM_183412|FBXO44|93611|F-box protein 44	0.640244	CTCF.p2:13:0.640
chr14	104836726	104836851	reg1025417.p1	5.058	+	TSC_hg19_v1_chr14_+_104605441 AB033062	-231336	+	NM_015656	-231729	+	AX781433 BX247999 NM_001080464 AX721044 BC035836 BC136637 AX781428 AX781429 AX781430 AX781431 AX781435	-284727	+	AK095913 NM_001008404 AK297818 AK309489 BC041103	209298	+	AB464314 AK124477 NM_207379	234300	-	TSC_hg19_v1_chr14_+_105147469 BC035345	310674	+	AB033062|KIF26A|26153|kinesin family member 26A##NM_015656|KIF26A|26153|kinesin family member 26A##AX781433|ASPG|374569|asparaginase homolog (S. cerevisiae)##BX247999|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_001080464|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC035836|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC136637|ASPG|374569|asparaginase homolog (S. cerevisiae)##AX781435|ASPG|374569|asparaginase homolog (S. cerevisiae)##AK095913|C14orf180|400258|chromosome 14 open reading frame 180##NM_001008404|C14orf180|400258|chromosome 14 open reading frame 180##AK297818|C14orf180|400258|chromosome 14 open reading frame 180##AK309489|C14orf180|400258|chromosome 14 open reading frame 180##BC041103|C14orf180|400258|chromosome 14 open reading frame 180##AK124477|TMEM179|388021|transmembrane protein 179##NM_207379|TMEM179|388021|transmembrane protein 179	1.004896	CTCF.p2:-21:0.945
chr1	41090892	41090999	reg1026211.p1	5.058	+	TSC_hg19_v1_chr1_+_40997324 BC091518	-93633	+	AK094072 NM_152373 TSC_hg19_v1_chr1_+_40997288	-93685	+	TSC_hg19_v1_chr1_+_40974438 AK021507 AK024797 AK094092 NM_022774 BC021969 AK023245	-116500	+	TSC_hg19_v1_chr1_-_41131126 BC003103	40189	-	D87074 NM_014747 TSC_hg19_v1_chr1_-_41131355	40398	-	NM_001142587 NM_001142588 NM_001142589 NM_014223 TSC_hg19_v1_chr1_+_41157288	66327	+	BC091518|ZNF684|127396|zinc finger protein 684##AK094072|ZNF684|127396|zinc finger protein 684##NM_152373|ZNF684|127396|zinc finger protein 684##AK021507|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##AK024797|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##AK094092|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##NM_022774|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##BC021969|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##AK023245|DEM1|64789|defects in morphology 1 homolog (S. cerevisiae)##BC003103|RIMS3|9783|regulating synaptic membrane exocytosis 3##D87074|RIMS3|9783|regulating synaptic membrane exocytosis 3##NM_014747|RIMS3|9783|regulating synaptic membrane exocytosis 3##NM_001142587|NFYC|4802|nuclear transcription factor Y, gamma##NM_001142588|NFYC|4802|nuclear transcription factor Y, gamma##NM_001142589|NFYC|4802|nuclear transcription factor Y, gamma##NM_014223|NFYC|4802|nuclear transcription factor Y, gamma	0.690563	CTCF.p2:-10:0.691
chr6	209878	210041	reg1029261.p2	5.058	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	82126	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	82538	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	181805	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.0	
chr6_ssto_hap7	2371712	2371785	reg1023467.p1	5.058	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.481265	CTCF.p2:1:0.481
chr9	130680704	130680873	reg1028488.p4	5.058	+	BC036705 TSC_hg19_v1_chr9_-_130679297 AK292049 AK000600 NM_175039 NM_175040	-1528	-	TSC_hg19_v1_chr9_-_130667604 AY358672 AK124217 AK310850	-13173	-	TSC_hg19_v1_chr9_-_130661892 BC036102	-18878	-	TSC_hg19_v1_chr9_-_130689700 BC042184 NM_173492	8945	-	NM_001135219	12287	-	TSC_hg19_v1_chr9_-_130700118 BC015374	19319	-	BC036705|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AK292049|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AK000600|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##NM_175039|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##NM_175040|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AY358672|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK124217|LOC100131355|100131355|uncharacterized LOC100131355##AK310850|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC036102|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC042184|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##NM_173492|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##NM_001135219|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##BC015374|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit	0.469966	CTCF.p2:-7:0.470
chr11	110306121	110306250	reg1034008.p1	5.057	+	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	-5469	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	-138872	-	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	-342055	+	AY496266 TSC_hg19_v1_chr11_-_110582834	276618	-	TSC_hg19_v1_chr11_-_110582887 AB037812	276740	-	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	277100	-	NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20##AB037812|ARHGAP20|57569|Rho GTPase activating protein 20##AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20	0.991106	CTCF.p2:-20:0.991
chr15	64943930	64944110	reg1027810.p2	5.056	+	AB056456 TSC_hg19_v1_chr15_+_64885153	-58867	+	NM_015042	-152402	+	TSC_hg19_v1_chr15_+_64752786 BC142647	-191161	+	BC119629 BC119630 BC148316 BC127630 TSC_hg19_v1_chr15_-_64995360 BC127631 AF242520 AF242521	51340	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	51382	-	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	51449	-	NM_015042|ZNF609|23060|zinc finger protein 609##BC142647|ZNF609|23060|zinc finger protein 609##BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2##BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2	0.0	
chr19	3547564	3547691	reg1022903.p1	5.056	+	NM_001135580	-8473	+	AB033068 NM_001136197 NM_001136198 DQ890739 AF080397 CU680596 AB013462 AB013463 AF433157 BT007115	-24657	+	TSC_hg19_v1_chr19_+_3506308 NM_016263 BC013413 AF102507 AF083810	-41312	+	DQ892284 DQ895484 CU691388 TSC_hg19_v1_chr19_-_3557547	9848	-	TSC_hg19_v1_chr19_-_3557559 BC036706	9928	-	BC094804 BC068439 NM_001042680 NM_021731 NM_174983 TSC_hg19_v1_chr19_-_3557583	9947	-	NM_001135580|C19orf71|100128569|chromosome 19 open reading frame 71##AB033068|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##NM_001136197|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##NM_001136198|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##DQ890739|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AF080397|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AB013462|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AB013463|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AF433157|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##BT007115|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##NM_016263|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##BC013413|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AF102507|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##AF083810|FZR1|51343|fizzy/cell division cycle 20 related 1 (Drosophila)##DQ892284|MFSD12|126321|major facilitator superfamily domain containing 12##DQ895484|MFSD12|126321|major facilitator superfamily domain containing 12##BC036706|MFSD12|126321|major facilitator superfamily domain containing 12##BC068439|MFSD12|126321|major facilitator superfamily domain containing 12##NM_001042680|MFSD12|126321|major facilitator superfamily domain containing 12##NM_021731|MFSD12|126321|major facilitator superfamily domain containing 12##NM_174983|MFSD12|126321|major facilitator superfamily domain containing 12	1.02023	CTCF.p2:-18:0.999
chr2	102852078	102852203	reg1027824.p2	5.056	+	AF284434 NM_003854 U49065 BC107064	-48692	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	-81720	+	TSC_hg19_v1_chr2_+_102759205 X16896	-92908	+	AB012701 NM_016232 AK313967 AK303389	75851	+	BC012580 BC030975 NM_003856 AK291578 AB029084	101591	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	126968	+	AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##X16896|IL1R1|3554|interleukin 1 receptor, type I##AB012701|IL1RL1|9173|interleukin 1 receptor-like 1##NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1##AK313967|IL18R1|8809|interleukin 18 receptor 1##AK303389|IL1RL1|9173|interleukin 1 receptor-like 1##BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1	0.878621	CTCF.p2:0:0.879
chr6_qbl_hap6	2658309	2658380	reg1024848.p1	5.056	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.99593	CTCF.p2:-11:0.996
chrX	114978603	114978783	reg1006754.p2	5.056	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-150825	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-181651	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-183087	+	BC003645 TSC_hg19_v1_chrX_-_115085443	106746	-	AK313927 NM_000686 X87723 U16957	323302	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	589074	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr16	56764132	56764267	reg1026707.p2	5.055	+	TSC_hg19_v1_chr16_+_56764089 D42085 AF086282 BC034346 AK292262	-114	+	NM_014669 TSC_hg19_v1_chr16_+_56764040	-168	+	TSC_hg19_v1_chr16_+_56716381 AK311284 AK311373 NM_005952 BC032131 BC032338 BC018190 BC053882 BC029916 X76717 AB528765 S68956	-47784	+	NM_001242795 AK056637 TSC_hg19_v1_chr16_+_56815740	51536	+	AK294176 NM_001242796	53190	+	AK315298 NM_000339 NM_001126107 NM_001126108 AK223133 X91220 U44128 AB463268	134933	+	D42085|NUP93|9688|nucleoporin 93kDa##AF086282|NUP93|9688|nucleoporin 93kDa##BC034346|NUP93|9688|nucleoporin 93kDa##AK292262|NUP93|9688|nucleoporin 93kDa##NM_014669|NUP93|9688|nucleoporin 93kDa##NM_005952|MT1X|4501|metallothionein 1X##BC032131|MT1X|4501|metallothionein 1X##BC032338|MT1X|4501|metallothionein 1X##BC018190|MT1X|4501|metallothionein 1X##BC053882|MT1X|4501|metallothionein 1X##BC029916|MT1X|4501|metallothionein 1X##X76717|MT1X|4501|metallothionein 1X##S68956|MT1X|4501|metallothionein 1X##NM_001242795|NUP93|9688|nucleoporin 93kDa##AK056637|NUP93|9688|nucleoporin 93kDa##AK294176|NUP93|9688|nucleoporin 93kDa##NM_001242796|NUP93|9688|nucleoporin 93kDa##AK315298|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_000339|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126107|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126108|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK223133|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##X91220|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##U44128|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3	0.0	
chr16	85762669	85762781	reg1024618.p2	5.055	+	BC003186 NM_016095 TSC_hg19_v1_chr16_-_85722590	-40126	-	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	-40183	-	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	-115772	+	TSC_hg19_v1_chr16_-_85784703 NM_206967	21963	-	BT007132 CU675661 AF005888 TSC_hg19_v1_chr16_-_85833151 BC007445 BC001472 BC005886 BC020250 AK313977 NM_001142288 NM_006067	70316	-	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	70508	+	BC003186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_016095|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##NM_206967|C16orf74|404550|chromosome 16 open reading frame 74##BT007132|COX4NB|10328|COX4 neighbor##AF005888|COX4NB|10328|COX4 neighbor##BC007445|COX4NB|10328|COX4 neighbor##BC001472|COX4NB|10328|COX4 neighbor##BC005886|COX4NB|10328|COX4 neighbor##BC020250|COX4NB|10328|COX4 neighbor##AK313977|COX4NB|10328|COX4 neighbor##NM_001142288|COX4NB|10328|COX4 neighbor##NM_006067|COX4NB|10328|COX4 neighbor##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1	0.221445	CTCF.p2:-24:0.221
chr3	135522070	135522152	reg1041992.p1	5.055	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-1007810	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-1007960	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-1152266	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	162420	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	162509	+	NM_181897 AK316258 L12146	219507	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.0	
chr10	74020837	74021018	reg1018243.p1	5.054	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-44816	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-45139	+	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	-45163	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	12897	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	93751	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	93999	-	AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	0.127305	
chr11	2914143	2914272	reg1007876.p3	5.054	+	U22398 BC039188 NM_000076 NM_001122630 NM_001122631 TSC_hg19_v1_chr11_-_2907004 BC067842	-7213	-	AK123073 TSC_hg19_v1_chr11_-_2721223	-192982	-	BC007733 TSC_hg19_v1_chr11_-_2560881	-353360	-	TSC_hg19_v1_chr11_+_2920918 BC015571 NM_183233	6738	+	TSC_hg19_v1_chr11_+_2923507 NM_002555	9295	+	TSC_hg19_v1_chr11_+_2923528 AB012083 AF028738 AF059663 AF070479 AF037064	9329	+	U22398|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC039188|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_000076|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122630|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122631|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC067842|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##AK123073|KCNQ1OT1|10984|KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)##BC015571|SLC22A18|5002|solute carrier family 22, member 18##NM_183233|SLC22A18|5002|solute carrier family 22, member 18##NM_002555|SLC22A18|5002|solute carrier family 22, member 18##AB012083|SLC22A18|5002|solute carrier family 22, member 18##AF028738|SLC22A18|5002|solute carrier family 22, member 18##AF059663|SLC22A18|5002|solute carrier family 22, member 18##AF070479|SLC22A18|5002|solute carrier family 22, member 18##AF037064|SLC22A18|5002|solute carrier family 22, member 18	0.179914	
chr11	86130071	86130210	reg1027760.p1	5.054	+	AK131331 NM_001156474 NM_021827	-44363	+	NM_016401 TSC_hg19_v1_chr11_+_86013281 AF161487 AF161527 AK001447 AK223198 BC015991 BC021621 AK298763 BC018080 BC001677 BC006476 DQ892731 DQ895977 CU674828 CU676162	-116771	+	TSC_hg19_v1_chr11_+_85956277 BC068995 AK294133 CU686693 AB463023 EU446743 AF078933 AK301265 BC047672	-173854	+	TSC_hg19_v1_chr11_-_86383218 BC022472 NM_001014811 AK092181	253065	-	X79440 TSC_hg19_v1_chr11_-_86383470 NM_006680 AK313695	253302	-	TSC_hg19_v1_chr11_-_86383659 AK300974 NM_001161586	253525	-	AK131331|CCDC81|60494|coiled-coil domain containing 81##NM_001156474|CCDC81|60494|coiled-coil domain containing 81##NM_021827|CCDC81|60494|coiled-coil domain containing 81##NM_016401|C11orf73|51501|chromosome 11 open reading frame 73##AF161487|C11orf73|51501|chromosome 11 open reading frame 73##AF161527|C11orf73|51501|chromosome 11 open reading frame 73##AK001447|C11orf73|51501|chromosome 11 open reading frame 73##AK223198|C11orf73|51501|chromosome 11 open reading frame 73##BC015991|C11orf73|51501|chromosome 11 open reading frame 73##BC021621|C11orf73|51501|chromosome 11 open reading frame 73##AK298763|C11orf73|51501|chromosome 11 open reading frame 73##BC018080|C11orf73|51501|chromosome 11 open reading frame 73##BC001677|C11orf73|51501|chromosome 11 open reading frame 73##BC006476|C11orf73|51501|chromosome 11 open reading frame 73##DQ892731|C11orf73|51501|chromosome 11 open reading frame 73##DQ895977|C11orf73|51501|chromosome 11 open reading frame 73##BC068995|EED|8726|embryonic ectoderm development##AK294133|EED|8726|embryonic ectoderm development##EU446743|EED|8726|embryonic ectoderm development##AF078933|EED|8726|embryonic ectoderm development##AK301265|EED|8726|embryonic ectoderm development##BC047672|EED|8726|embryonic ectoderm development##BC022472|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001014811|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK092181|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##X79440|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_006680|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK313695|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK300974|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001161586|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial	0.199398	
chr1	84322969	84323109	reg1026506.p2	5.054	+	AF104266 AF104938 AF104939 NM_012302	-2056958	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	-2551112	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-4850612	-	AK097722 TSC_hg19_v1_chr1_-_84326308	3229	-	TSC_hg19_v1_chr1_-_84326677 BC036594	3637	-	AK126792 BC048970 BC032829 TSC_hg19_v1_chr1_-_84464848 BC060878 BC028350 NM_024686	141757	-	AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	0.0	
chr19	38634687	38634842	reg1028572.p1	5.054	+	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	-236852	+	TSC_hg19_v1_chr19_+_38397847 NM_015073	-236907	+	AK302913 AY026504 AK128826 NM_031951	-237490	-	AB463560 GQ358728 BC125152 BC125153 U43843 AK308563 NM_001135155 NM_004647	80071	-	BC021191 TSC_hg19_v1_chr19_-_38720320 NM_001135156	85552	-	TSC_hg19_v1_chr19_-_38720336 AK297581	85570	-	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##AK302913|WDR87|83889|WD repeat domain 87##AY026504|WDR87|83889|WD repeat domain 87##AK128826|WDR87|83889|WD repeat domain 87##NM_031951|WDR87|83889|WD repeat domain 87##GQ358728|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125152|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125153|DPF1|8193|D4, zinc and double PHD fingers family 1##U43843|DPF1|8193|D4, zinc and double PHD fingers family 1##AK308563|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135155|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_004647|DPF1|8193|D4, zinc and double PHD fingers family 1##BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1##AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1	0.867506	CTCF.p2:17:0.868
chr2	131185307	131185410	reg1024259.p1	5.054	+	NM_001142370 NM_014369 TSC_hg19_v1_chr2_+_131113598 BC031076 BC024280 BC041562 BC052800 X79568 AK303804 CU690934	-71708	+	TSC_hg19_v1_chr2_+_131100487 BC010042 NM_033416	-84872	+	TSC_hg19_v1_chr2_+_131100469 AK289878 AK292345 AK312808	-84890	+	NM_001079530 AK315326 AK290094 NM_032545 BC146897 BC110080 BC069508 BC074825 BC074826 AF312769	93480	+	CU686866 AF312769 BC074825 BC074826 BC069508 BC110080 BC146897 NM_032545 AK290094 AK315326 NM_001079530	171696	-	BC105013 BC105041 NM_207364 AY569570 AY280965	301325	+	NM_001142370|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##NM_014369|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC031076|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC024280|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC041562|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC052800|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##X79568|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##AK303804|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC010042|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_033416|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK289878|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK292345|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK312808|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##BC105013|GPR148|344561|G protein-coupled receptor 148##BC105041|GPR148|344561|G protein-coupled receptor 148##NM_207364|GPR148|344561|G protein-coupled receptor 148##AY569570|GPR148|344561|G protein-coupled receptor 148##AY280965|GPR148|344561|G protein-coupled receptor 148	0.0	
chr4	81046686	81046798	reg1027068.p1	5.054	+	TSC_hg19_v1_chr4_-_80994394 NM_001145794 NM_058172 BC107876	-52275	-	TSC_hg19_v1_chr4_-_80994237 AK091721 AX747144	-52505	-	AB527650 AY233452 TSC_hg19_v1_chr4_-_80993874 AY040326 BC114374 AB209913	-52854	-	AF275815 NM_020226	59681	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	71912	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	141117	+	NM_001145794|ANTXR2|118429|anthrax toxin receptor 2##NM_058172|ANTXR2|118429|anthrax toxin receptor 2##BC107876|ANTXR2|118429|anthrax toxin receptor 2##AY233452|ANTXR2|118429|anthrax toxin receptor 2##AY040326|ANTXR2|118429|anthrax toxin receptor 2##BC114374|ANTXR2|118429|anthrax toxin receptor 2##AB209913|ANTXR2|118429|anthrax toxin receptor 2##AF275815|PRDM8|56978|PR domain containing 8##NM_020226|PRDM8|56978|PR domain containing 8##NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5	0.983917	CTCF.p2:0:0.984
chr5	172141775	172141955	reg1025489.p1	5.054	+	AF275799 TSC_hg19_v1_chr5_-_172083715	-58222	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-73612	+	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	-260362	-	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	56346	-	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	119453	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	244583	+	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1	0.0	
chr6	107349289	107349378	reg1021759.p1	5.054	+	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	-271836	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	-272053	-	TSC_hg19_v1_chr6_+_106960443 U83115	-388922	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	139	+	BC131628 NM_001080450	86302	-	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	431397	-	NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##U83115|AIM1|202|absent in melanoma 1##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2	0.935765	CTCF.p2:-12:0.936
chr8	124287445	124287625	reg1027803.p2	5.054	+	TSC_hg19_v1_chr8_-_124286697 NM_001017926 NM_001204180 NM_007222	-844	-	AF195766 TSC_hg19_v1_chr8_-_124286514 AK094451 BC040481	-1012	-	TSC_hg19_v1_chr8_-_124253618 AK222660 GQ129275 GQ129276 BC067796 AK027731 NM_032847	-33925	-	AL833653 AY598335 BC113656 BC143716 TSC_hg19_v1_chr8_-_124408640 BC007123	121014	-	TSC_hg19_v1_chr8_-_124408665 BC112942	121130	-	TSC_hg19_v1_chr8_-_124408671 AK097133	121142	-	NM_001017926|ZHX1|11244|zinc fingers and homeoboxes 1##NM_001204180|ZHX1-C8ORF76|100533106|ZHX1-C8ORF76 readthrough##NM_007222|ZHX1|11244|zinc fingers and homeoboxes 1##AF195766|ZHX1|11244|zinc fingers and homeoboxes 1##AK094451|ZHX1|11244|zinc fingers and homeoboxes 1##BC040481|ZHX1|11244|zinc fingers and homeoboxes 1##AK222660|C8orf76|84933|chromosome 8 open reading frame 76##GQ129275|C8orf76|84933|chromosome 8 open reading frame 76##GQ129276|C8orf76|84933|chromosome 8 open reading frame 76##BC067796|C8orf76|84933|chromosome 8 open reading frame 76##AK027731|C8orf76|84933|chromosome 8 open reading frame 76##NM_032847|C8orf76|84933|chromosome 8 open reading frame 76##AL833653|ATAD2|29028|ATPase family, AAA domain containing 2##AY598335|ATAD2|29028|ATPase family, AAA domain containing 2##BC113656|ATAD2|29028|ATPase family, AAA domain containing 2##BC143716|ATAD2|29028|ATPase family, AAA domain containing 2##BC007123|ATAD2|29028|ATPase family, AAA domain containing 2##BC112942|ATAD2|29028|ATPase family, AAA domain containing 2##AK097133|ATAD2|29028|ATPase family, AAA domain containing 2	0.0	
chr18	22067624	22067738	reg1002031.p1	5.053	+	AF312230 BC069136 NM_001143828 NM_001160166 NM_021624 AB045370 BC112348 AB044934 AF307973 AF325356 AF329449 AJ298292 AY008280 AY136745 DQ835186 DQ835187	-27039	+	TSC_hg19_v1_chr18_+_22006671 AK312727 BC034016 AB026264 AB587563 CU689806 DQ893141 EU176771 AF208694	-61016	+	TSC_hg19_v1_chr18_+_22006608 AK292533 NM_018439 BC036074	-61074	+	TSC_hg19_v1_chr18_-_22931121 AB385259	863467	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	864356	-	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	864482	-	AF312230|HRH4|59340|histamine receptor H4##BC069136|HRH4|59340|histamine receptor H4##NM_001143828|HRH4|59340|histamine receptor H4##NM_001160166|HRH4|59340|histamine receptor H4##NM_021624|HRH4|59340|histamine receptor H4##AB045370|HRH4|59340|histamine receptor H4##BC112348|HRH4|59340|histamine receptor H4##AB044934|HRH4|59340|histamine receptor H4##AF307973|HRH4|59340|histamine receptor H4##AF325356|HRH4|59340|histamine receptor H4##AF329449|HRH4|59340|histamine receptor H4##AJ298292|HRH4|59340|histamine receptor H4##AY008280|HRH4|59340|histamine receptor H4##AY136745|HRH4|59340|histamine receptor H4##DQ835186|HRH4|59340|histamine receptor H4##DQ835187|HRH4|59340|histamine receptor H4##AK312727|IMPACT|55364|Impact homolog (mouse)##BC034016|IMPACT|55364|Impact homolog (mouse)##AB026264|IMPACT|55364|Impact homolog (mouse)##DQ893141|IMPACT|55364|Impact homolog (mouse)##EU176771|IMPACT|55364|Impact homolog (mouse)##AF208694|IMPACT|55364|Impact homolog (mouse)##AK292533|IMPACT|55364|Impact homolog (mouse)##NM_018439|IMPACT|55364|Impact homolog (mouse)##BC036074|IMPACT|55364|Impact homolog (mouse)##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521	0.0	
chr4	186266449	186266623	reg1024304.p1	5.053	+	NM_031953	-135253	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	-141392	-	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	-202066	+	AB037746 BC152444 NM_018409 AL161975	33625	-	TSC_hg19_v1_chr4_+_186317840 AY296056 NM_181726	51303	+	TSC_hg19_v1_chr4_+_186317892 BC088376	51359	+	NM_031953|SNX25|83891|sorting nexin 25##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB037746|LRP2BP|55805|LRP2 binding protein##BC152444|LRP2BP|55805|LRP2 binding protein##NM_018409|LRP2BP|55805|LRP2 binding protein##AL161975|LRP2BP|55805|LRP2 binding protein##AY296056|ANKRD37|353322|ankyrin repeat domain 37##NM_181726|ANKRD37|353322|ankyrin repeat domain 37##BC088376|ANKRD37|353322|ankyrin repeat domain 37	0.0	
chr11	7165285	7165389	reg1028929.p1	5.052	+	NM_014469 AK292271 AF069682 BC057796 BC029295 AB527964	-55080	+	AK310900 NM_176822	-123638	+	BC136772 BC144405 AF056617 AK313462 TSC_hg19_v1_chr11_-_7041578 NM_013249	-123812	-	TSC_hg19_v1_chr11_+_7273164 BC046367 NM_175733 AK315013	107856	+	AK055003 AB527847 CU692338 TSC_hg19_v1_chr11_+_7273475	108100	+	NM_198474 BX647908 BC092488 TSC_hg19_v1_chr11_+_7506763 AK298137 BC035895 AK297778	341380	+	NM_014469|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AK292271|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AF069682|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC057796|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC029295|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AK310900|NLRP14|338323|NLR family, pyrin domain containing 14##NM_176822|NLRP14|338323|NLR family, pyrin domain containing 14##BC136772|ZNF214|7761|zinc finger protein 214##BC144405|ZNF214|7761|zinc finger protein 214##AF056617|ZNF214|7761|zinc finger protein 214##AK313462|ZNF214|7761|zinc finger protein 214##NM_013249|ZNF214|7761|zinc finger protein 214##BC046367|SYT9|143425|synaptotagmin IX##NM_175733|SYT9|143425|synaptotagmin IX##AK315013|SYT9|143425|synaptotagmin IX##AK055003|SYT9|143425|synaptotagmin IX##NM_198474|OLFML1|283298|olfactomedin-like 1##BX647908|OLFML1|283298|olfactomedin-like 1##BC092488|OLFML1|283298|olfactomedin-like 1##AK298137|OLFML1|283298|olfactomedin-like 1##BC035895|OLFML1|283298|olfactomedin-like 1##AK297778|OLFML1|283298|olfactomedin-like 1	0.072581	
chr2	136875606	136875711	reg1030166.p1	5.052	+	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-1860	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-132442	-	TSC_hg19_v1_chr2_-_136743143 AK222476 BC000629 AK290607 J05032	-132529	-	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	18	-	TSC_hg19_v1_chr2_+_137523114 AK299929	647458	+	NM_001080427	872803	+	NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK222476|DARS|1615|aspartyl-tRNA synthetase##BC000629|DARS|1615|aspartyl-tRNA synthetase##AK290607|DARS|1615|aspartyl-tRNA synthetase##J05032|DARS|1615|aspartyl-tRNA synthetase##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B	0.0	
chr4	60112896	60113006	reg1026856.p2	5.052	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-2136383	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-2136419	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-2136552	-	TSC_hg19_v1_chr4_+_62066948 AK309793	1954024	+	NM_015236	2249887	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	5162145	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.99684	CTCF.p2:-11:0.997
chr8	61829060	61829241	reg1022079.p1	5.052	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-237748	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-237862	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-399400	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	371400	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	773196	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	797868	-	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase	0.0	
chr16	84619719	84619900	reg1027160.p2	5.051	+	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	-81518	-	TSC_hg19_v1_chr16_+_84402143 AK300526 AY791884 BX648333 NM_014861 AK316128 CR749829	-217667	+	AF302109 NM_021197 AF169631 TSC_hg19_v1_chr16_+_84328440 AK075061 BC029159 DQ893365 DQ896682	-291321	+	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	31767	-	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	31851	-	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	62325	+	BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##AK300526|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AY791884|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BX648333|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##NM_014861|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AK316128|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##CR749829|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AF302109|WFDC1|58189|WAP four-disulfide core domain 1##NM_021197|WFDC1|58189|WAP four-disulfide core domain 1##AF169631|WFDC1|58189|WAP four-disulfide core domain 1##AK075061|WFDC1|58189|WAP four-disulfide core domain 1##BC029159|WFDC1|58189|WAP four-disulfide core domain 1##DQ893365|WFDC1|58189|WAP four-disulfide core domain 1##DQ896682|WFDC1|58189|WAP four-disulfide core domain 1##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)	0.0	
chr21	15931591	15931770	reg1029057.p2	5.051	+	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	-13031	-	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-176207	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-343183	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	505537	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	1170645	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	1170861	+	BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25	0.0	
chr3	183959800	183959888	reg1029452.p1	5.051	+	BC136609 NM_138345	-11578	+	TSC_hg19_v1_chr3_+_183903978 AK299433 AK299256 BC009253 AK027288 BC035652 BC051754 BC051884 AK290106 CU679275 CU690830	-55863	+	NM_018358 AK002060 AK092415 TSC_hg19_v1_chr3_+_183903963 AK097073	-55930	+	TSC_hg19_v1_chr3_-_183966735 BC004313 BC021062 CU678238 DQ893160 DQ896456 BC002839 AK297701 AK299575	6875	-	TSC_hg19_v1_chr3_-_183966751 NM_005787 Y09022	6918	-	AK289361 NM_001006941 TSC_hg19_v1_chr3_-_183967318	7456	-	BC136609|VWA5B2|90113|von Willebrand factor A domain containing 5B2##NM_138345|VWA5B2|90113|von Willebrand factor A domain containing 5B2##AK299433|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##AK299256|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##BC009253|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##AK027288|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##BC035652|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##BC051754|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##BC051884|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##AK290106|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##NM_018358|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##AK002060|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##AK092415|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##AK097073|ABCF3|55324|ATP-binding cassette, sub-family F (GCN20), member 3##BC004313|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##BC021062|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##DQ893160|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##DQ896456|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##BC002839|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##AK297701|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##AK299575|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##NM_005787|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##Y09022|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##AK289361|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)##NM_001006941|ALG3|10195|asparagine-linked glycosylation 3, alpha-1,3- mannosyltransferase homolog (S. cerevisiae)	0.778434	CTCF.p2:-5:0.765
chrX	70190576	70190683	reg1024037.p1	5.051	+	AF320612 BC033816 AX721169 BC021242 AK074865 AK075014 NM_001048164 NM_032803	-39680	-	AK057523 AK292471 BC036016 NM_001003811 NM_031276	-62066	-	TSC_hg19_v1_chrX_+_69674948 AK303377 NM_001166278	-515695	+	BT007203 TSC_hg19_v1_chrX_-_70288224 BC080535 AF171229 BC103847 BC103848 BC020559 NM_013346 AK312977	97571	-	TSC_hg19_v1_chrX_+_70316026 NM_001170931 NM_005938 AK300142 X93996 BC106761 AB463650 AF384029	125378	+	NM_001025265	136008	-	AF320612|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##BC033816|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK074865|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK075014|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_001048164|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_032803|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK057523|TEX11|56159|testis expressed 11##AK292471|TEX11|56159|testis expressed 11##BC036016|TEX11|56159|testis expressed 11##NM_001003811|TEX11|56159|testis expressed 11##NM_031276|TEX11|56159|testis expressed 11##AK303377|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_001166278|DLG3|1741|discs, large homolog 3 (Drosophila)##BT007203|SNX12|29934|sorting nexin 12##BC080535|SNX12|29934|sorting nexin 12##AF171229|SNX12|29934|sorting nexin 12##BC103847|SNX12|29934|sorting nexin 12##BC103848|SNX12|29934|sorting nexin 12##BC020559|SNX12|29934|sorting nexin 12##NM_013346|SNX12|29934|sorting nexin 12##AK312977|SNX12|29934|sorting nexin 12##NM_001170931|FOXO4|4303|forkhead box O4##NM_005938|FOXO4|4303|forkhead box O4##X93996|FOXO4|4303|forkhead box O4##BC106761|FOXO4|4303|forkhead box O4##AF384029|FOXO4|4303|forkhead box O4##NM_001025265|CXorf65|158830|chromosome X open reading frame 65	0.339861	CTCF.p2:12:0.340
chr11	111749807	111749904	reg1024214.p1	5.050	+	TSC_hg19_v1_chr11_-_111742285 DQ892761 DQ896006 AM393011 AM393178 AB527104 CU679277 AL136927 BC009255 AF395532 AK308025 AK225261 AK298811 AK025498 NM_001077690 NM_024740	-7600	-	TSC_hg19_v1_chr11_-_111742001 NM_001077691 NM_001077692	-7837	-	AB384965 DQ890606 DQ894107 EU176538 AK292275 AK293388 AK294716 TSC_hg19_v1_chr11_-_111637114 BC027596 AK296455 AK301705 AF087438 AF163473 NM_001177562 NM_001177563 NM_002716 NM_181699 NM_181700	-112729	-	AK300795 BC006136 TSC_hg19_v1_chr11_-_111749888 BC127680	3	-	NM_022761	92	+	AK302630 AK311254 NM_138378	307	-	DQ892761|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##DQ896006|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AM393011|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AM393178|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AL136927|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##BC009255|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AF395532|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK308025|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK225261|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK298811|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK025498|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_001077690|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_024740|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_001077691|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_001077692|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##DQ890606|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##DQ894107|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##EU176538|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK292275|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK293388|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK294716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##BC027596|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK296455|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK301705|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF087438|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF163473|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177562|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177563|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_002716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181699|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181700|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK300795|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1##BC006136|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1##BC127680|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1##NM_022761|C11orf1|64776|chromosome 11 open reading frame 1##AK311254|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1##NM_138378|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	0.168485	
chr12	113899645	113899778	reg1006185.p1	5.050	+	TSC_hg19_v1_chr12_+_113860217 BC009849 NM_138432 BC091479 AF134473	-39514	+	J05037 TSC_hg19_v1_chr12_-_113841693 AK292760 BC020750 NM_006843	-58037	-	TSC_hg19_v1_chr12_+_113796394 BC030618	-103325	+	AF291181 NM_022363	10165	-	CU678656 EU831458 EU831545 AB385372 AB014582 BC004289 BC006137 AL117547 TSC_hg19_v1_chr12_-_114404131 AK291444 AK314606 NM_001146698 NM_001146699 NM_016196	504393	-	NM_080718 U80987 U89353 AB527531 EU446658	941993	-	BC009849|SDSL|113675|serine dehydratase-like##NM_138432|SDSL|113675|serine dehydratase-like##BC091479|SDSL|113675|serine dehydratase-like##AF134473|SDSL|113675|serine dehydratase-like##J05037|SDS|10993|serine dehydratase##AK292760|SDS|10993|serine dehydratase##BC020750|SDS|10993|serine dehydratase##NM_006843|SDS|10993|serine dehydratase##BC030618|PLBD2|196463|phospholipase B domain containing 2##AF291181|LHX5|64211|LIM homeobox 5##NM_022363|LHX5|64211|LIM homeobox 5##EU831458|RBM19|9904|RNA binding motif protein 19##EU831545|RBM19|9904|RNA binding motif protein 19##AB014582|RBM19|9904|RNA binding motif protein 19##BC004289|RBM19|9904|RNA binding motif protein 19##BC006137|RBM19|9904|RNA binding motif protein 19##AL117547|RBM19|9904|RNA binding motif protein 19##AK291444|RBM19|9904|RNA binding motif protein 19##AK314606|RBM19|9904|RNA binding motif protein 19##NM_001146698|RBM19|9904|RNA binding motif protein 19##NM_001146699|RBM19|9904|RNA binding motif protein 19##NM_016196|RBM19|9904|RNA binding motif protein 19##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5	0.0	
chr1	222012802	222012938	reg1024415.p1	5.050	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-97384	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-97440	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-97462	-	AY358602 BC007638 BC016552 NM_024746	708564	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	750307	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	778530	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.0	
chr12	49823129	49823234	reg1030267.p2	5.050	+	TSC_hg19_v1_chr12_+_49761253 BC017767 AL833614 BC048299 AK292334 AK023202 BX648916 BC032441	-61787	+	TSC_hg19_v1_chr12_+_49760679 AK095582 NM_023071	-62492	+	BC033236 NM_024902	-82141	+	TSC_hg19_v1_chr12_+_49932842 AB033108 NM_012284 BC144254 BC150602 AB022696 AB384589	109839	+	AY336730 NM_001012300	137040	-	TSC_hg19_v1_chr12_-_49961916 AK123187 BC011794 NM_006337 BX538079 AK308581	138737	-	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2##AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2##BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK095582|SPATS2|65244|spermatogenesis associated, serine-rich 2##NM_023071|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##AB033108|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##NM_012284|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC144254|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC150602|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AB022696|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AY336730|MCRS1|10445|microspherule protein 1##NM_001012300|MCRS1|10445|microspherule protein 1##BC011794|MCRS1|10445|microspherule protein 1##NM_006337|MCRS1|10445|microspherule protein 1##BX538079|MCRS1|10445|microspherule protein 1	0.0	
chr13	110899968	110900086	reg1026114.p1	5.050	+	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	-97292	-	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	-461119	-	AB290159 AK127806 NM_001198950	-1618458	+	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	59482	-	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	59594	+	BX648393 TSC_hg19_v1_chr13_+_111134980	234931	+	M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2##BX648393|COL4A2|1284|collagen, type IV, alpha 2	0.0	
chr22	18896095	18896210	reg1031358.p1	5.050	+	NM_005675 AF228707 TSC_hg19_v1_chr22_+_18893832 AK315115 BC047039 CR456434 AK098780 AB528122 CU012994 CU013282	-2342	+	TSC_hg19_v1_chr22_+_18632936 AK313385 AL136690 BC014896	-263250	+	TSC_hg19_v1_chr22_+_18632731 NM_017414	-263418	+	AB209472 TSC_hg19_v1_chr22_-_18923807 BC068260 BC094736 BC036534	27579	-	BC118597 BC121809 NM_001195226 NM_016335 U79754	27862	-	TSC_hg19_v1_chr22_+_18957980 AB051434	61854	+	NM_005675|DGCR6|8214|DiGeorge syndrome critical region gene 6##AF228707|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK315115|DGCR6|8214|DiGeorge syndrome critical region gene 6##BC047039|DGCR6|8214|DiGeorge syndrome critical region gene 6##CR456434|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK098780|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU012994|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU013282|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK313385|USP18|11274|ubiquitin specific peptidase 18##AL136690|USP18|11274|ubiquitin specific peptidase 18##BC014896|USP18|11274|ubiquitin specific peptidase 18##NM_017414|USP18|11274|ubiquitin specific peptidase 18##AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1##BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1##BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1##BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1##BC118597|PRODH|5625|proline dehydrogenase (oxidase) 1##BC121809|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_001195226|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_016335|PRODH|5625|proline dehydrogenase (oxidase) 1##U79754|PRODH|5625|proline dehydrogenase (oxidase) 1##AB051434|DGCR5|26220|DiGeorge syndrome critical region gene 5 (non-protein coding)	0.98634	CTCF.p2:-14:0.986
chr3	160814690	160814810	reg1026854.p2	5.050	+	AY337264 NM_139245	-340755	+	TSC_hg19_v1_chr3_+_160473386 BC110801	-341410	+	AK026248 NM_025047 BC034354	-419795	+	AB050856 NM_033169 TSC_hg19_v1_chr3_-_160823138 AY359049 BC047618 AK223439 BC028571 AF154848 AK022491 AK095917 NM_001038628 NM_003781 NM_033167 NM_033168	8187	-	AK225664 TSC_hg19_v1_chr3_+_160939097	124346	+	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	124371	+	AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##BC110801|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AK026248|ARL14|80117|ADP-ribosylation factor-like 14##NM_025047|ARL14|80117|ADP-ribosylation factor-like 14##BC034354|ARL14|80117|ADP-ribosylation factor-like 14##AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK225664|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)	0.972528	CTCF.p2:-2:0.973
chr3	50362097	50362216	reg1029159.p2	5.050	+	AK225635 AJ000099 U09577 AK092449 AK310963 TSC_hg19_v1_chr3_-_50360173 AK127945 NM_003773 NM_033158	-1962	-	TSC_hg19_v1_chr3_-_50358905 BC000692	-3258	-	AK097287 NM_153281	-12345	-	TSC_hg19_v1_chr3_-_50365630 BC023976 AK311998 AK124058	3472	-	TSC_hg19_v1_chr3_-_50365669 AF055479 NM_007275	3519	-	BT020047 BT020048 AF132676 TSC_hg19_v1_chr3_-_50374792	12615	-	AK225635|HYAL2|8692|hyaluronoglucosaminidase 2##AJ000099|HYAL2|8692|hyaluronoglucosaminidase 2##U09577|HYAL2|8692|hyaluronoglucosaminidase 2##AK092449|HYAL2|8692|hyaluronoglucosaminidase 2##AK310963|HYAL2|8692|hyaluronoglucosaminidase 2##AK127945|HYAL2|8692|hyaluronoglucosaminidase 2##NM_003773|HYAL2|8692|hyaluronoglucosaminidase 2##NM_033158|HYAL2|8692|hyaluronoglucosaminidase 2##BC000692|HYAL2|8692|hyaluronoglucosaminidase 2##AK097287|HYAL1|3373|hyaluronoglucosaminidase 1##NM_153281|HYAL1|3373|hyaluronoglucosaminidase 1##BC023976|TUSC2|11334|tumor suppressor candidate 2##AK311998|TUSC2|11334|tumor suppressor candidate 2##AK124058|TUSC2|11334|tumor suppressor candidate 2##AF055479|TUSC2|11334|tumor suppressor candidate 2##NM_007275|TUSC2|11334|tumor suppressor candidate 2##BT020047|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##BT020048|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1##AF132676|RASSF1|11186|Ras association (RalGDS/AF-6) domain family member 1	0.993249	CTCF.p2:21:0.993
chr5	141229690	141229822	reg1027975.p1	5.050	+	TSC_hg19_v1_chr5_-_141061801 NM_022481	-167939	-	AJ310567 TSC_hg19_v1_chr5_-_141061794 AK091385 AX746950 AK290052	-167984	-	TSC_hg19_v1_chr5_-_141030986 AY217346 NM_033449	-198773	-	CU690208 TSC_hg19_v1_chr5_-_141257848	28083	-	BC035812 NM_002587 NM_032420 BC051287 BC075821 TSC_hg19_v1_chr5_-_141257976 AK289512	28203	-	TSC_hg19_v1_chr5_+_141303403 NM_001142603 NM_014773 BC007855 D50931 AK292869	73653	+	NM_022481|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AJ310567|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK091385|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK290052|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AY217346|FCHSD1|89848|FCH and double SH3 domains 1##NM_033449|FCHSD1|89848|FCH and double SH3 domains 1##BC035812|PCDH1|5097|protocadherin 1##NM_002587|PCDH1|5097|protocadherin 1##NM_032420|PCDH1|5097|protocadherin 1##BC051287|PCDH1|5097|protocadherin 1##BC075821|PCDH1|5097|protocadherin 1##AK289512|PCDH1|5097|protocadherin 1##NM_001142603|KIAA0141|9812|KIAA0141##NM_014773|KIAA0141|9812|KIAA0141##BC007855|KIAA0141|9812|KIAA0141##D50931|KIAA0141|9812|KIAA0141##AK292869|KIAA0141|9812|KIAA0141	0.038615	
chr6_cox_hap2	2210793	2210923	reg1027224.p1	5.050	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.996692	CTCF.p2:18:0.997
chr15	28631862	28631981	reg1028564.p1	5.049	+	AF071172 BC015486 BC142951 BC045544 NM_004667	-64650	-	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	-287488	-	NM_033223 BC029850 BC045709 S82769	-1415374	+	TSC_hg19_v1_chr15_+_29033278 AK302529	401402	+	TSC_hg19_v1_chr15_+_29077475 BC018626	445561	+	NM_001130414 NM_005503 AF047348 BC082986	581928	+	AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2##M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2	0.864445	CTCF.p2:-15:0.836
chr18	11163761	11163855	reg1026006.p1	5.049	+	NM_022068	-15048	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-637711	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-637752	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	525404	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	587707	+	L10665 TSC_hg19_v1_chr18_+_11752245	588407	+	NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.635721	CTCF.p2:4:0.636
chr4	153381751	153381876	reg1025691.p1	5.049	+	NM_001013415 AY008274	-78149	-	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	-107917	-	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	-699672	-	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	74481	-	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	75620	+	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	219387	-	NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154	0.0	
chr1	203578679	203578784	reg1027319.p2	5.048	+	AJ133790 AY077681 NM_014359 AF161702	-115450	+	U29089 BC032498 TSC_hg19_v1_chr1_+_203444965	-133771	+	NM_002725 NM_201348 TSC_hg19_v1_chr1_+_203444937	-133822	+	TSC_hg19_v1_chr1_+_203595922 NM_001001396 NM_001684	17178	+	TSC_hg19_v1_chr1_+_203595959 CR936708 CR749393	17228	+	TSC_hg19_v1_chr1_+_203596243 BC140774	17501	+	AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin##U29089|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##BC032498|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_002725|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_201348|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_001001396|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_001684|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR936708|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR749393|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##BC140774|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4	0.0	
chr5	108260189	108260282	reg1028652.p1	5.048	+	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	-175563	+	AK293376 J03358 NM_005246 AK296874	-176673	+	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	-196255	-	BC030826 AB007898 TSC_hg19_v1_chr5_-_108745619 AK291759 NM_014819	485386	-	TSC_hg19_v1_chr5_+_109025072 BC031659	764829	+	TSC_hg19_v1_chr5_+_109025096 BC111062	764862	+	AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##AB593118|HP07349|100652853|uncharacterized protein HP07349##BC030826|PJA2|9867|praja ring finger 2##AB007898|PJA2|9867|praja ring finger 2##AK291759|PJA2|9867|praja ring finger 2##NM_014819|PJA2|9867|praja ring finger 2##BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1	0.211754	CTCF.p2:-6:0.212
chr5	148931392	148931502	reg1024594.p2	5.048	+	TSC_hg19_v1_chr5_-_148931006 NM_001025105 NM_001892	-441	-	TSC_hg19_v1_chr5_-_148930950 AK294942	-481	-	AF218004 TSC_hg19_v1_chr5_-_148930935 AK303794 BC021971 BC025371 BC007246	-523	-	AK300559 AK316002 BC041325 NM_001001669	29637	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	178380	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	178429	+	NM_001025105|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001892|CSNK1A1|1452|casein kinase 1, alpha 1##AK294942|CSNK1A1|1452|casein kinase 1, alpha 1##AF218004|CSNK1A1|1452|casein kinase 1, alpha 1##AK303794|CSNK1A1|1452|casein kinase 1, alpha 1##BC021971|CSNK1A1|1452|casein kinase 1, alpha 1##BC025371|CSNK1A1|1452|casein kinase 1, alpha 1##BC007246|CSNK1A1|1452|casein kinase 1, alpha 1##AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	0.01589	
chr11	41311090	41311196	reg1025367.p1	5.047	+	AB046800 NM_020929	-995480	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-996549	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-4691341	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	2022375	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	2022421	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	2022497	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.875045	CTCF.p2:-5:0.875
chr17	1378207	1378356	reg1027274.p2	5.047	+	BT007277 DQ891147 DQ894327 AB528363 TSC_hg19_v1_chr17_-_1359527 D10656 BC001718 BC009837 AK291060 BC008506 NM_005206 NM_016823	-18789	-	TSC_hg19_v1_chr17_-_1303556 NM_006761	-74728	-	TSC_hg19_v1_chr17_-_1303504 BT007161 CU674076 EU176525 U28936 AB590347 BC000179 AX775995 U43399 U43430 U54778 U20972 BC001440 AY883089 AK295260 AK295997 AK296050 AK296555 AK128785 AK316185 AK316201	-74812	-	TSC_hg19_v1_chr17_-_1389055 NM_001080950	10757	-	TSC_hg19_v1_chr17_-_1389335 AK304782	11115	-	TSC_hg19_v1_chr17_-_1394974 NM_033375	16664	-	BT007277|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##DQ891147|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##DQ894327|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##D10656|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC001718|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC009837|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##AK291060|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC008506|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_005206|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_016823|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_006761|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BT007161|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##EU176525|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U28936|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC000179|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43399|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43430|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U54778|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U20972|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC001440|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AY883089|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295260|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295997|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296050|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296555|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK128785|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316185|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316201|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##NM_001080950|MYO1C|4641|myosin IC##AK304782|MYO1C|4641|myosin IC##NM_033375|MYO1C|4641|myosin IC	0.0	
chr20	35820815	35820924	reg1027053.p2	5.047	+	AB527120 AM392522 AM392819 TSC_hg19_v1_chr20_-_35807952 BC030006 BC057767 NM_152503 NM_213631 NM_213632 AK093432 AX748122	-12932	-	TSC_hg19_v1_chr20_+_35807749 AK308683 CR456899 DQ892347 DQ895552	-13116	+	TSC_hg19_v1_chr20_+_35807732 AK315801 BC003560	-13154	+	X00094 BC098109 BC098161 BC099727 NM_001184731 NM_021081	64418	-	TSC_hg19_v1_chr20_+_35918057 AK292971 NM_001003897 NM_022077	97166	+	TSC_hg19_v1_chr20_+_35918065 BC016822 BC014672	97216	+	AM392522|C20orf132|140699|chromosome 20 open reading frame 132##AM392819|C20orf132|140699|chromosome 20 open reading frame 132##BC030006|C20orf132|140699|chromosome 20 open reading frame 132##BC057767|C20orf132|140699|chromosome 20 open reading frame 132##NM_152503|C20orf132|140699|chromosome 20 open reading frame 132##NM_213631|C20orf132|140699|chromosome 20 open reading frame 132##NM_213632|C20orf132|140699|chromosome 20 open reading frame 132##AK093432|C20orf132|140699|chromosome 20 open reading frame 132##AK308683|RPN2|6185|ribophorin II##CR456899|RPN2|6185|ribophorin II##DQ892347|RPN2|6185|ribophorin II##DQ895552|RPN2|6185|ribophorin II##AK315801|RPN2|6185|ribophorin II##BC003560|RPN2|6185|ribophorin II##X00094|GHRH|2691|growth hormone releasing hormone##BC098109|GHRH|2691|growth hormone releasing hormone##BC098161|GHRH|2691|growth hormone releasing hormone##BC099727|GHRH|2691|growth hormone releasing hormone##NM_001184731|GHRH|2691|growth hormone releasing hormone##NM_021081|GHRH|2691|growth hormone releasing hormone##AK292971|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_001003897|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_022077|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC016822|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC014672|MANBAL|63905|mannosidase, beta A, lysosomal-like	0.965646	CTCF.p2:-18:0.966
chr5	131999741	131999921	reg1019245.p3	5.047	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	-5941	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-107191	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	-120639	-	NM_000589 NM_172348	9541	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	73386	-	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	83313	+	BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A##AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2	0.0	
chr9	42089887	42089991	reg1029894.p2	5.047	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-135025	-	BC040528 NM_001113541 NM_015667	-589261	+	BC040528 NM_001113541 NM_015667 NM_001242613	-762560	-	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	278419	+	NM_001099279 NM_199244	627294	+	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	1043548	-	BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2	0.990956	CTCF.p2:-7:0.980
chrX	13359991	13360121	reg1026983.p1	5.047	+	AK302365 NM_001135995	-21539	-	AB050195 TSC_hg19_v1_chrX_-_13338140 BC137186 BC137187	-21918	-	BX647580 AK313776 AF494345 BX648111 BX648919 NM_174901	-297238	-	TSC_hg19_v1_chrX_-_13397507 D28370	37449	-	NM_001167890 NM_015507 AK075214 AK300236 AJ245671 AF193055 AF186084 AK300137 AK315018 AY358333 BC038587 AL117610 CU691592 DQ890938	227780	+	AK291271 AK315599 NM_152634 AK294465	311210	+	AK302365|ATXN3L|92552|ataxin 3-like##NM_001135995|ATXN3L|92552|ataxin 3-like##AB050195|ATXN3L|92552|ataxin 3-like##BC137186|ATXN3L|92552|ataxin 3-like##BC137187|ATXN3L|92552|ataxin 3-like##BX647580|FAM9C|171484|family with sequence similarity 9, member C##AK313776|FAM9C|171484|family with sequence similarity 9, member C##AF494345|FAM9C|171484|family with sequence similarity 9, member C##BX648111|FAM9C|171484|family with sequence similarity 9, member C##BX648919|FAM9C|171484|family with sequence similarity 9, member C##NM_174901|FAM9C|171484|family with sequence similarity 9, member C##NM_001167890|EGFL6|25975|EGF-like-domain, multiple 6##NM_015507|EGFL6|25975|EGF-like-domain, multiple 6##AK075214|EGFL6|25975|EGF-like-domain, multiple 6##AK300236|EGFL6|25975|EGF-like-domain, multiple 6##AJ245671|EGFL6|25975|EGF-like-domain, multiple 6##AF193055|EGFL6|25975|EGF-like-domain, multiple 6##AF186084|EGFL6|25975|EGF-like-domain, multiple 6##AK300137|EGFL6|25975|EGF-like-domain, multiple 6##AK315018|EGFL6|25975|EGF-like-domain, multiple 6##AY358333|EGFL6|25975|EGF-like-domain, multiple 6##BC038587|EGFL6|25975|EGF-like-domain, multiple 6##AL117610|EGFL6|25975|EGF-like-domain, multiple 6##DQ890938|EGFL6|25975|EGF-like-domain, multiple 6##AK291271|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK315599|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##NM_152634|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing##AK294465|TCEANC|170082|transcription elongation factor A (SII) N-terminal and central domain containing	0.67907	CTCF.p2:36:0.679
chr10	44802356	44802489	reg1024721.p1	5.046	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-658116	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-658217	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-700525	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	78077	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	604296	+	AK056518 TSC_hg19_v1_chr10_-_45455156	652725	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.955105	CTCF.p2:13:0.955
chr11	132028154	132028258	reg1028321.p1	5.046	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-246867	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-247582	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-787737	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	784808	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	785399	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	1374108	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.686761	CTCF.p2:-17:0.687
chr1	160575709	160575819	reg1025244.p2	5.046	+	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	-26476	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	-26517	-	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	-82735	-	AK314244 NM_003037 BC012602	41299	-	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	105822	-	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	133300	+	AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7	0.051029	
chr15	53072841	53072940	reg1026188.p1	5.046	+	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	-102009	-	TSC_hg19_v1_chr15_-_52861344 BC100015 AL833077	-211513	-	TSC_hg19_v1_chr15_-_52861228 AF084555 BC003418 NM_006628	-211658	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	9304	-	AK096055 BX537884 NM_182758	978957	-	NM_001080534	1232210	+	AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##BC100015|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AL833077|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AF084555|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC003418|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##NM_006628|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)	0.822137	CTCF.p2:4:0.822
chr2	233309243	233309365	reg1029532.p1	5.046	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	-37728	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	-65921	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-482944	+	AK313163 NM_001631 BC132678 M31008 M15694	11566	+	AB030579 Y16187 AY358923 NM_004826 BC050453	43229	-	NM_001195129	75868	+	NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal##AB030579|ECEL1|9427|endothelin converting enzyme-like 1##Y16187|ECEL1|9427|endothelin converting enzyme-like 1##AY358923|ECEL1|9427|endothelin converting enzyme-like 1##NM_004826|ECEL1|9427|endothelin converting enzyme-like 1##BC050453|ECEL1|9427|endothelin converting enzyme-like 1##NM_001195129|PRSS56|646960|protease, serine, 56	1.080799	CTCF.p2:15:0.987
chr8	52365426	52365583	reg1024861.p2	5.046	+	AJ003030 NM_018967	-1540908	+	NM_001007176 BC017981 AJ276240	-2380595	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-2531594	-	EU170240 AY877349 NM_144651	356449	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	446098	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	446223	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.0	
chrX	110408096	110408210	reg1025012.p1	5.046	+	NM_001128168 NM_001128172 NM_001128173 AB102659 AF068864 AM943850 AM943851 AM943852	-41836	+	NM_002578 TSC_hg19_v1_chrX_+_110339395	-68752	+	AK290504 NM_001128166 NM_001128167 TSC_hg19_v1_chrX_+_110187624 AK315284	-220606	+	TSC_hg19_v1_chrX_-_110513712 AF029232 AK312701	105551	-	AJ000388 TSC_hg19_v1_chrX_-_110513775 NM_014289	105610	-	AJ003112 NM_000555	246220	-	NM_001128168|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128172|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128173|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AB102659|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AF068864|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943850|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943851|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943852|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AF029232|CAPN6|827|calpain 6##AK312701|CAPN6|827|calpain 6##AJ000388|CAPN6|827|calpain 6##NM_014289|CAPN6|827|calpain 6##AJ003112|DCX|1641|doublecortin##NM_000555|DCX|1641|doublecortin	0.0	
chr11	119210725	119210853	reg1028791.p1	5.045	+	TSC_hg19_v1_chr11_+_119205234 BX648447 AK122642 BX647424 NM_032015	-5558	+	AB527309 EU832794 GQ129330 TSC_hg19_v1_chr11_-_119187841 BC006329 M28882 M29277 AF089868 BC056418 AK128335 AK291571 AK312430 NM_006500 AB209925	-22948	-	TSC_hg19_v1_chr11_+_119077024 BC132733 BC136463	-133749	+	AL110261 AB590791 TSC_hg19_v1_chr11_-_119211170	313	-	TSC_hg19_v1_chr11_-_119211575 AF329841 AY358383 BC029485	793	-	AJ862823 BC036675 AB055505 AK295203 AK055132 NM_015645 NM_031433	6584	-	BX648447|RNF26|79102|ring finger protein 26##AK122642|RNF26|79102|ring finger protein 26##BX647424|RNF26|79102|ring finger protein 26##NM_032015|RNF26|79102|ring finger protein 26##EU832794|MCAM|4162|melanoma cell adhesion molecule##GQ129330|MCAM|4162|melanoma cell adhesion molecule##M28882|MCAM|4162|melanoma cell adhesion molecule##M29277|MCAM|4162|melanoma cell adhesion molecule##AF089868|MCAM|4162|melanoma cell adhesion molecule##BC056418|MCAM|4162|melanoma cell adhesion molecule##AK128335|MCAM|4162|melanoma cell adhesion molecule##AK291571|MCAM|4162|melanoma cell adhesion molecule##AK312430|MCAM|4162|melanoma cell adhesion molecule##NM_006500|MCAM|4162|melanoma cell adhesion molecule##AB209925|MCAM|4162|melanoma cell adhesion molecule##BC132733|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##BC136463|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##AL110261|MFRP|83552|membrane frizzled-related protein##AF329841|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##AY358383|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##BC029485|MFRP|83552|membrane frizzled-related protein##AJ862823|MFRP|83552|membrane frizzled-related protein##BC036675|MFRP|83552|membrane frizzled-related protein##AB055505|MFRP|83552|membrane frizzled-related protein##AK295203|MFRP|83552|membrane frizzled-related protein##AK055132|MFRP|83552|membrane frizzled-related protein##NM_015645|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##NM_031433|MFRP|83552|membrane frizzled-related protein	0.991312	CTCF.p2:10:0.991
chr1	223309613	223309724	reg1028810.p1	5.045	+	TSC_hg19_v1_chr1_+_222988422 NM_032890	-321277	+	AK125494 NM_207468	-399111	+	TSC_hg19_v1_chr1_+_222886732 AK315930 AK293974	-422935	+	TSC_hg19_v1_chr1_-_223316591 NM_003268	6938	-	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	227803	-	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	257097	+	NM_032890|DISP1|84976|dispatched homolog 1 (Drosophila)##AK125494|FAM177B|400823|family with sequence similarity 177, member B##NM_207468|FAM177B|400823|family with sequence similarity 177, member B##AK315930|BROX|148362|BRO1 domain and CAAX motif containing##AK293974|BROX|148362|BRO1 domain and CAAX motif containing##NM_003268|TLR5|7100|toll-like receptor 5##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4##NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65	0.066225	
chr18	60798632	60798800	reg1003938.p2	5.045	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-2781	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-414408	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-414790	+	BC027258 NM_000633 NM_000657	187844	-	TSC_hg19_v1_chr18_-_60986977 X06487	188277	-	TSC_hg19_v1_chr18_-_60987309 M13994	188570	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr11	81208377	81208503	reg1032822.p1	5.044	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-2056716	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-2922545	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-2922648	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	1236458	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	1403077	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	1404334	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.999725	CTCF.p2:2:1.000
chr2	218654295	218654397	reg1001576.p2	5.044	+	BC029516 NM_003284	-929565	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-1094086	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-1094780	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	154435	-	AK001785 TSC_hg19_v1_chr2_-_218843551	189200	-	TSC_hg19_v1_chr2_-_218867719 AK309785	213377	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.0	
chr2	30555939	30556120	reg1028397.p2	5.044	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-101527	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-186153	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	-186196	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	114119	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	474264	-	AK122747 NM_001253827	796468	-	AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.0	
chr4	37385368	37385466	reg1024143.p1	5.044	+	NM_001144990	-138728	+	BC157885 NM_001170700	-1099774	+	AK131492 NM_001136536 AK304357 AK316523	-1102171	+	NM_001104629 BC037906	70158	+	AK001879 NM_018302 AK225192	200452	+	TSC_hg19_v1_chr4_-_37687999 BC039540 AK075468 NM_001085399 NM_001085400	302556	-	NM_001144990|KIAA1239|57495|KIAA1239##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19##BC039540|RELL1|768211|RELT-like 1##AK075468|RELL1|768211|RELT-like 1##NM_001085399|RELL1|768211|RELT-like 1##NM_001085400|RELL1|768211|RELT-like 1	0.876773	CTCF.p2:26:0.877
chr7	112580626	112580806	reg1019041.p2	5.044	+	AL834437 AK299901 TSC_hg19_v1_chr7_-_112579931 BC114615 AK056380 NM_152556	-886	-	AK293311 TSC_hg19_v1_chr7_-_112430447 AK314460 AL136626 AK025482 NM_022484	-150273	-	NM_001134468 BC031976 AK096894 NM_182597	-459730	+	AK297464 AK312587 NM_001146266 AL161959 NM_001146267 TSC_hg19_v1_chr7_-_112726667	145779	-	BC030577 TSC_hg19_v1_chr7_-_112727780	147064	-	TSC_hg19_v1_chr7_-_112727812 AK309392 AF250237 AK302769	147091	-	AL834437|C7orf60|154743|chromosome 7 open reading frame 60##AK299901|C7orf60|154743|chromosome 7 open reading frame 60##BC114615|C7orf60|154743|chromosome 7 open reading frame 60##AK056380|C7orf60|154743|chromosome 7 open reading frame 60##NM_152556|C7orf60|154743|chromosome 7 open reading frame 60##AK293311|TMEM168|64418|transmembrane protein 168##AK314460|TMEM168|64418|transmembrane protein 168##AL136626|TMEM168|64418|transmembrane protein 168##AK025482|TMEM168|64418|transmembrane protein 168##NM_022484|TMEM168|64418|transmembrane protein 168##NM_001134468|C7orf53|286006|chromosome 7 open reading frame 53##BC031976|C7orf53|286006|chromosome 7 open reading frame 53##AK096894|C7orf53|286006|chromosome 7 open reading frame 53##NM_182597|C7orf53|286006|chromosome 7 open reading frame 53##AK297464|GPR85|54329|G protein-coupled receptor 85##AK312587|GPR85|54329|G protein-coupled receptor 85##NM_001146266|GPR85|54329|G protein-coupled receptor 85##AL161959|GPR85|54329|G protein-coupled receptor 85##NM_001146267|GPR85|54329|G protein-coupled receptor 85##BC030577|GPR85|54329|G protein-coupled receptor 85##AK309392|GPR85|54329|G protein-coupled receptor 85##AF250237|GPR85|54329|G protein-coupled receptor 85##AK302769|GPR85|54329|G protein-coupled receptor 85	0.0	
chr7	42730782	42730914	reg1024233.p2	5.044	+	TSC_hg19_v1_chr7_-_42276797 AK308429	-454053	-	NM_000168	-454231	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-988163	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	220741	-	BC002900 AB528708 CR450317 CU690460 D00760 BC047697 TSC_hg19_v1_chr7_-_42971774 AK311369 BX641097 AK222976	240905	-	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	240953	-	AK308429|GLI3|2737|GLI family zinc finger 3##NM_000168|GLI3|2737|GLI family zinc finger 3##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25##BC002900|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##CR450317|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##D00760|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC047697|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BX641097|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK222976|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2	0.118886	
chr12	97383839	97383962	reg1026236.p1	5.043	+	BC027605 NM_001135175	-82657	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-82869	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-589583	-	TSC_hg19_v1_chr12_-_98897622 AK126817	1513727	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	1525467	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	1525507	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.981702	CTCF.p2:-29:0.982
chr16	795905	795994	reg1026814.p2	5.043	+	TSC_hg19_v1_chr16_-_790998 AK056467 CU688868 BC030248 AY129231 AK025641 AK223005 AK293591 AK300087 AK301023 AK310875 NM_022493	-4995	-	AK095675 TSC_hg19_v1_chr16_-_787923	-8043	-	BC033796 BC036747 AK054841 BC015008 AB209331 AK293575 NM_032304 BC004353 AK098340	-18812	+	AY743922 NM_005823 BC009272 NM_001177355 BC003512	14816	+	TSC_hg19_v1_chr16_+_811049 NM_013404 U40434 D49441	15125	+	NM_001025190	36976	-	AK056467|NARFL|64428|nuclear prelamin A recognition factor-like##BC030248|NARFL|64428|nuclear prelamin A recognition factor-like##AY129231|NARFL|64428|nuclear prelamin A recognition factor-like##AK025641|NARFL|64428|nuclear prelamin A recognition factor-like##AK223005|NARFL|64428|nuclear prelamin A recognition factor-like##AK293591|NARFL|64428|nuclear prelamin A recognition factor-like##AK300087|NARFL|64428|nuclear prelamin A recognition factor-like##AK301023|NARFL|64428|nuclear prelamin A recognition factor-like##AK310875|NARFL|64428|nuclear prelamin A recognition factor-like##NM_022493|NARFL|64428|nuclear prelamin A recognition factor-like##AK095675|NARFL|64428|nuclear prelamin A recognition factor-like##BC033796|HAGHL|84264|hydroxyacylglutathione hydrolase-like##BC036747|HAGHL|84264|hydroxyacylglutathione hydrolase-like##AK054841|HAGHL|84264|hydroxyacylglutathione hydrolase-like##BC015008|HAGHL|84264|hydroxyacylglutathione hydrolase-like##AB209331|HAGHL|84264|hydroxyacylglutathione hydrolase-like##AK293575|HAGHL|84264|hydroxyacylglutathione hydrolase-like##NM_032304|HAGHL|84264|hydroxyacylglutathione hydrolase-like##BC004353|HAGHL|84264|hydroxyacylglutathione hydrolase-like##AK098340|HAGHL|84264|hydroxyacylglutathione hydrolase-like##AY743922|MSLN|10232|mesothelin##NM_005823|MSLN|10232|mesothelin##BC009272|MSLN|10232|mesothelin##NM_001177355|MSLN|10232|mesothelin##BC003512|MSLN|10232|mesothelin##NM_013404|MSLN|10232|mesothelin##U40434|MSLN|10232|mesothelin##D49441|MSLN|10232|mesothelin##NM_001025190|MSLNL|401827|mesothelin-like	1.200599	CTCF.p2:-2:0.903	CTCF.p2:28:0.298
chr16	85562620	85562755	reg1026309.p2	5.043	+	BC093665 BC111944 AK126284 NM_198491	-416633	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-501317	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-517558	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	82334	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	84266	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	159855	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.0	
chr21	45575308	45575488	reg1028303.p2	5.043	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-21837	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-21893	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-48099	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	85368	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	85459	-	AF194032 NM_013369 NM_175867	106700	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.012954	
chr3	121694912	121695002	reg1026858.p1	5.043	+	NM_001145998 NM_021082 AK289820 AK296895 AK302002 AK304189 BC020743 BC044572 BC038445 S78203	-81725	+	AF217516 NM_018456 TSC_hg19_v1_chr3_+_121554083 BC014589 AY049020 BC014209 AF517829 AK301560 AB528527 CU676923 DQ892648 DQ895887	-140877	+	TSC_hg19_v1_chr3_-_121553908 AB062481 AY714228 NM_001023570 NM_001023571	-141030	-	AY672837 AY672839 BC044240 AY134857 TSC_hg19_v1_chr3_-_121741095 AK129974 NM_001199799 NM_001199800 NM_175924	46090	-	NM_001206924 NM_001206925 NM_175862 AK294663 AK301237 AK316203 BC040261 L25259 AK291497 AK313103	79297	+	NM_006889 NM_176892 U04343	101765	+	NM_001145998|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##NM_021082|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK289820|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK296895|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK302002|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK304189|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC020743|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC044572|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC038445|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##S78203|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AF217516|EAF2|55840|ELL associated factor 2##NM_018456|EAF2|55840|ELL associated factor 2##BC014589|EAF2|55840|ELL associated factor 2##AY049020|EAF2|55840|ELL associated factor 2##BC014209|EAF2|55840|ELL associated factor 2##AF517829|EAF2|55840|ELL associated factor 2##AK301560|EAF2|55840|ELL associated factor 2##DQ892648|EAF2|55840|ELL associated factor 2##DQ895887|EAF2|55840|ELL associated factor 2##AB062481|IQCB1|9657|IQ motif containing B1##AY714228|IQCB1|9657|IQ motif containing B1##NM_001023570|IQCB1|9657|IQ motif containing B1##NM_001023571|IQCB1|9657|IQ motif containing B1##AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1##BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199799|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199800|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001206924|CD86|942|CD86 molecule##NM_001206925|CD86|942|CD86 molecule##NM_175862|CD86|942|CD86 molecule##AK294663|CD86|942|CD86 molecule##AK301237|CD86|942|CD86 molecule##AK316203|CD86|942|CD86 molecule##BC040261|CD86|942|CD86 molecule##L25259|CD86|942|CD86 molecule##AK291497|CD86|942|CD86 molecule##AK313103|CD86|942|CD86 molecule##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule	0.0	
chr8	57530766	57530902	reg1025039.p1	5.043	+	BC107706 TSC_hg19_v1_chr8_-_57359201 AK309758 AK314908 NM_001135690	-171605	-	CR541808 CR541828 DQ890865 DQ890871 DQ894027 BC032505 NM_006211	-172283	-	TSC_hg19_v1_chr8_+_57358383 AK091563 AX747062	-172462	+	AY032885 TSC_hg19_v1_chr8_-_57906227	375422	-	TSC_hg19_v1_chr8_-_57906381 BC017797	375544	-	BC067814 TSC_hg19_v1_chr8_-_57906402	375568	-	BC107706|PENK|5179|proenkephalin##AK314908|PENK|5179|proenkephalin##NM_001135690|PENK|5179|proenkephalin##CR541808|PENK|5179|proenkephalin##CR541828|PENK|5179|proenkephalin##DQ890865|PENK|5179|proenkephalin##DQ890871|PENK|5179|proenkephalin##DQ894027|PENK|5179|proenkephalin##BC032505|PENK|5179|proenkephalin##NM_006211|PENK|5179|proenkephalin##AY032885|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1	0.455727	CTCF.p2:-10:0.456
chr11	84235622	84235771	reg1029067.p1	5.042	+	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	-207315	-	AK294375 AK126776 AK295624 NM_001142700	-251420	-	AK299778 CR933674 NM_001142702	-842245	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	398536	-	U32376 AB209252 AK295094 NM_001364	398754	-	CR749820 NM_001142699	1102617	-	AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)##U32376|DLG2|1740|discs, large homolog 2 (Drosophila)##AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)##CR749820|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142699|DLG2|1740|discs, large homolog 2 (Drosophila)	0.986917	CTCF.p2:0:0.987
chr15	52369479	52369621	reg1027102.p1	5.042	+	TSC_hg19_v1_chr15_+_52311442 BC035492	-58089	+	TSC_hg19_v1_chr15_+_52311432 CR749401	-58116	+	TSC_hg19_v1_chr15_+_52311425 NM_002748	-58131	+	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	35396	-	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	102591	-	TSC_hg19_v1_chr15_+_52472257 AF007131	102785	+	BC035492|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##NM_002748|MAPK6|5597|mitogen-activated protein kinase 6##AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973	0.111715	
chr19	12099587	12099768	reg1005594.p1	5.042	+	AK092240 AK299224 AX747424 NM_001012753 BC105711 BC105712 BC105713	-23795	+	TSC_hg19_v1_chr19_+_12035889 AK299182 AK308305 AL136732 NM_144566 BC144406 BC136777	-63759	+	TSC_hg19_v1_chr19_+_11998643 BC051309 NM_021915 EU446913	-101004	+	TSC_hg19_v1_chr19_-_12146492 AK129553 BC047412	46812	-	TSC_hg19_v1_chr19_-_12146530 AK098300 NM_001080411	46864	-	NM_001080404	64104	-	AK092240|ZNF763|284390|zinc finger protein 763##AK299224|ZNF763|284390|zinc finger protein 763##NM_001012753|ZNF763|284390|zinc finger protein 763##BC105711|ZNF763|284390|zinc finger protein 763##BC105712|ZNF763|284390|zinc finger protein 763##BC105713|ZNF763|284390|zinc finger protein 763##AK299182|ZNF763|284390|zinc finger protein 763##AK308305|ZNF700|90592|zinc finger protein 700##AL136732|ZNF700|90592|zinc finger protein 700##NM_144566|ZNF700|90592|zinc finger protein 700##BC144406|ZNF700|90592|zinc finger protein 700##BC136777|ZNF700|90592|zinc finger protein 700##BC051309|ZNF69|7620|zinc finger protein 69##NM_021915|ZNF69|7620|zinc finger protein 69##EU446913|ZNF69|7620|zinc finger protein 69##BC047412|ZNF433|163059|zinc finger protein 433##AK098300|ZNF433|163059|zinc finger protein 433##NM_001080411|ZNF433|163059|zinc finger protein 433##NM_001080404|ZNF878|729747|zinc finger protein 878	0.044413	
chr19	17496753	17496933	reg1001540.p1	5.042	+	CU691156 TSC_hg19_v1_chr19_-_17488155 AF348827 BC050365 BC056414 NM_031310 AF326591 AL834363 AK096030 AK313837	-8711	-	NM_001128855 NM_032620 NM_133644 AF360742 AF360743 AY078987 AY078988 AK298485 AK027606 AK291929 BC019261 TSC_hg19_v1_chr19_+_17448396 BC017207 AK311442 AF360744 DQ892217 DQ895413 CU676414 CU677863	-48471	+	NM_001195422 AK297953	-51044	+	CU689786 D28137 NM_004335 AK223124 AK291099 AK303593 TSC_hg19_v1_chr19_-_17516428 BC033873	19576	-	AK311380 AK055623 TSC_hg19_v1_chr19_+_17516630	19723	+	TSC_hg19_v1_chr19_+_17530855 AK057057 AK289487	34005	+	AF348827|PLVAP|83483|plasmalemma vesicle associated protein##BC050365|PLVAP|83483|plasmalemma vesicle associated protein##BC056414|PLVAP|83483|plasmalemma vesicle associated protein##NM_031310|PLVAP|83483|plasmalemma vesicle associated protein##AF326591|PLVAP|83483|plasmalemma vesicle associated protein##AL834363|PLVAP|83483|plasmalemma vesicle associated protein##AK096030|PLVAP|83483|plasmalemma vesicle associated protein##AK313837|PLVAP|83483|plasmalemma vesicle associated protein##NM_001128855|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_032620|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_133644|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360742|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360743|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AY078987|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AY078988|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK298485|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK027606|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK291929|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC019261|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##BC017207|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK311442|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AF360744|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##DQ892217|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##DQ895413|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##NM_001195422|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##AK297953|GTPBP3|84705|GTP binding protein 3 (mitochondrial)##D28137|BST2|684|bone marrow stromal cell antigen 2##NM_004335|BST2|684|bone marrow stromal cell antigen 2##AK223124|BST2|684|bone marrow stromal cell antigen 2##AK291099|BST2|684|bone marrow stromal cell antigen 2##AK303593|BST2|684|bone marrow stromal cell antigen 2##BC033873|BST2|684|bone marrow stromal cell antigen 2##AK311380|LOC100507535|100507535|uncharacterized LOC100507535##AK055623|LOC100507535|100507535|uncharacterized LOC100507535##AK057057|FAM125A|93343|family with sequence similarity 125, member A##AK289487|FAM125A|93343|family with sequence similarity 125, member A	0.039436	
chr3	156877898	156878077	reg1026895.p1	5.042	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	-78	-	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-333876	+	BC034397 NM_001184718	-483535	+	NM_020307 AK122738	527	-	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	276663	+	CU691278 AB384625 HQ258524 AL713656 BC101660 BC113555 NM_001167917	335229	-	AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long##HQ258524|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AL713656|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC101660|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC113555|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167917|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	0.0	
chr4	53777995	53778092	reg1028370.p1	5.042	+	TSC_hg19_v1_chr4_+_53728483 AK021492 AK027267 AK314942 AY839725 AY839726 BC001087 BC001846 NM_023940 BC025694	-49555	+	AK095318 NM_001242690 NM_024534	-160250	-	AY189288 TSC_hg19_v1_chr4_-_53617616	-160453	-	BC012458 CU689380 GQ129374 GQ129375 TSC_hg19_v1_chr4_-_54232229 BC021137 AB074276 AK096833 BC032453 AY299407 NM_152540	454092	-	TSC_hg19_v1_chr4_+_54243807 AK295737	465726	+	TSC_hg19_v1_chr4_+_54243821 NM_001134937 NM_001134938 NM_030917	465772	+	AK027267|RASL11B|65997|RAS-like, family 11, member B##AK314942|RASL11B|65997|RAS-like, family 11, member B##AY839725|RASL11B|65997|RAS-like, family 11, member B##AY839726|RASL11B|65997|RAS-like, family 11, member B##BC001087|RASL11B|65997|RAS-like, family 11, member B##BC001846|RASL11B|65997|RAS-like, family 11, member B##NM_023940|RASL11B|65997|RAS-like, family 11, member B##BC025694|RASL11B|65997|RAS-like, family 11, member B##NM_001242690|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##NM_024534|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##AY189288|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##BC012458|SCFD2|152579|sec1 family domain containing 2##GQ129374|SCFD2|152579|sec1 family domain containing 2##GQ129375|SCFD2|152579|sec1 family domain containing 2##BC021137|SCFD2|152579|sec1 family domain containing 2##AB074276|SCFD2|152579|sec1 family domain containing 2##AK096833|SCFD2|152579|sec1 family domain containing 2##BC032453|SCFD2|152579|sec1 family domain containing 2##AY299407|SCFD2|152579|sec1 family domain containing 2##NM_152540|SCFD2|152579|sec1 family domain containing 2##AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	0.751562	CTCF.p2:2:0.752
chr11	798306	798408	reg1024850.p1	5.041	+	TSC_hg19_v1_chr11_-_798268 BC019033 NM_001191061	-86	-	TSC_hg19_v1_chr11_-_798017 AK290481 NM_001191060	-370	-	TSC_hg19_v1_chr11_-_796225 BC023545 AK311038 NM_024698	-2112	-	AB209529 TSC_hg19_v1_chr11_-_805240 AB208949 AF274972 NM_145886 NM_145887	6833	-	TSC_hg19_v1_chr11_-_809502 AB208832	11159	-	TSC_hg19_v1_chr11_+_809967 NM_001004 BC005354 BC005920 D28411 AK130959 AK311954 M17887	11592	+	BC019033|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22##NM_001191061|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22##AK290481|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22##NM_001191060|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22##BC023545|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22##AK311038|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22##NM_024698|SLC25A22|79751|solute carrier family 25 (mitochondrial carrier: glutamate), member 22##AB209529|PIDD|55367|p53-induced death domain protein##AB208949|PIDD|55367|p53-induced death domain protein##AF274972|PIDD|55367|p53-induced death domain protein##NM_145886|PIDD|55367|p53-induced death domain protein##NM_145887|PIDD|55367|p53-induced death domain protein##AB208832|PIDD|55367|p53-induced death domain protein##NM_001004|RPLP2|6181|ribosomal protein, large, P2##BC005354|RPLP2|6181|ribosomal protein, large, P2##BC005920|RPLP2|6181|ribosomal protein, large, P2##D28411|RPLP2|6181|ribosomal protein, large, P2##AK311954|RPLP2|6181|ribosomal protein, large, P2##M17887|RPLP2|6181|ribosomal protein, large, P2	0.928127	CTCF.p2:-13:0.928
chr14	106041502	106041670	reg1029021.p1	5.041	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-48645	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-83950	+	BX248038 NM_001134877	-85067	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	50750	-	BC040042 TSC_hg19_v1_chr14_-_106110945	69337	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	69530	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.0	
chr19	34921807	34921905	reg1029369.p1	5.041	+	TSC_hg19_v1_chr19_+_34919329 DQ893423 EU176757 CU678406 AF110957 BT009781 CR456756	-2515	+	TSC_hg19_v1_chr19_+_34919307 AF090384 AL136905 U35832	-2547	+	AK315521 TSC_hg19_v1_chr19_+_34919292	-2564	+	TSC_hg19_v1_chr19_+_34972869 NM_001080436	51016	+	BC093909 BC093935 NM_001025591	163633	-	TSC_hg19_v1_chr19_+_35168582 AL834318 NM_001012320 NM_018443 AK074901 AF155656 AK315241 AF190157 AK297551 AK131278 BC024176 AF265236 AF326206	246793	+	DQ893423|UBA2|10054|ubiquitin-like modifier activating enzyme 2##EU176757|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AF110957|UBA2|10054|ubiquitin-like modifier activating enzyme 2##BT009781|UBA2|10054|ubiquitin-like modifier activating enzyme 2##CR456756|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AF090384|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AL136905|UBA2|10054|ubiquitin-like modifier activating enzyme 2##U35832|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AK315521|UBA2|10054|ubiquitin-like modifier activating enzyme 2##NM_001080436|WTIP|126374|Wilms tumor 1 interacting protein##BC093909|SCGBL|284402|secretoglobin-like##BC093935|SCGBL|284402|secretoglobin-like##NM_001025591|SCGBL|284402|secretoglobin-like##AL834318|ZNF302|55900|zinc finger protein 302##NM_001012320|ZNF302|55900|zinc finger protein 302##NM_018443|ZNF302|55900|zinc finger protein 302##AK074901|ZNF302|55900|zinc finger protein 302##AF155656|ZNF302|55900|zinc finger protein 302##AK315241|ZNF302|55900|zinc finger protein 302##AF190157|ZNF302|55900|zinc finger protein 302##AK131278|ZNF302|55900|zinc finger protein 302##BC024176|ZNF302|55900|zinc finger protein 302##AF265236|ZNF302|55900|zinc finger protein 302##AF326206|ZNF302|55900|zinc finger protein 302	0.078445	
chr5	400173	400347	reg1016986.p2	5.041	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-95970	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-128455	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-128492	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	42970	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	43090	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	72852	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.0	
chr6	69053930	69054044	reg1028761.p1	5.041	+	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	-454959	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	-2636894	-	AY358133 NM_198283 AK310478	-2764282	-	AL833240 TSC_hg19_v1_chr6_-_69345026	290985	-	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	291414	+	TSC_hg19_v1_chr6_-_70506472 AB074281	1452490	-	AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3##AB074281|LMBRD1|55788|LMBR1 domain containing 1	0.966282	CTCF.p2:11:0.966
chrY	1576639	1576799	reg1028497.p1	5.041	+	AK301844 NM_001173473	-54068	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-54918	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-115750	-	BC043610 GQ280263 NM_178129 AK126147	29319	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	83810	+	NM_004043 U11090	87628	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr10	6690018	6690137	reg1028673.p1	5.040	+	TSC_hg19_v1_chr10_+_6622460 AY007155	-67597	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	-67816	-	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-445201	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	761173	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	763357	-	AK027849 TSC_hg19_v1_chr10_-_7659249	969140	-	AY007155|LOC439949|439949|uncharacterized LOC439949##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.013788	
chr11	73642459	73642594	reg1027796.p1	5.040	+	BC028677 TSC_hg19_v1_chr11_+_73588043 AK021910 AK222501 NM_025155 AK316394 AK225520 BC045774 BC021541 BC028628 BC006142 CU675271 AF087895	-54481	+	TSC_hg19_v1_chr11_-_73587892 AL359618 AK000434 NM_016565 BC106036	-54630	-	AF161408 TSC_hg19_v1_chr11_+_73498935 AK297746 NM_016055 BC009764 AK309219 AK310005	-143600	+	AY138810 NM_153614	18837	+	U94592 BC011737 TSC_hg19_v1_chr11_-_73693862	51318	-	TSC_hg19_v1_chr11_-_73693886 AK222540 AK222557 NM_003355	51359	-	BC028677|PAAF1|80227|proteasomal ATPase-associated factor 1##AK021910|PAAF1|80227|proteasomal ATPase-associated factor 1##AK222501|PAAF1|80227|proteasomal ATPase-associated factor 1##NM_025155|PAAF1|80227|proteasomal ATPase-associated factor 1##AK316394|PAAF1|80227|proteasomal ATPase-associated factor 1##AK225520|PAAF1|80227|proteasomal ATPase-associated factor 1##BC045774|PAAF1|80227|proteasomal ATPase-associated factor 1##BC021541|PAAF1|80227|proteasomal ATPase-associated factor 1##BC028628|PAAF1|80227|proteasomal ATPase-associated factor 1##BC006142|PAAF1|80227|proteasomal ATPase-associated factor 1##AF087895|PAAF1|80227|proteasomal ATPase-associated factor 1##AL359618|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##AK000434|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##NM_016565|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##BC106036|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##AF161408|MRPL48|51642|mitochondrial ribosomal protein L48##AK297746|MRPL48|51642|mitochondrial ribosomal protein L48##NM_016055|MRPL48|51642|mitochondrial ribosomal protein L48##BC009764|MRPL48|51642|mitochondrial ribosomal protein L48##AK309219|MRPL48|51642|mitochondrial ribosomal protein L48##AK310005|MRPL48|51642|mitochondrial ribosomal protein L48##AY138810|DNAJB13|374407|DnaJ (Hsp40) homolog, subfamily B, member 13##NM_153614|DNAJB13|374407|DnaJ (Hsp40) homolog, subfamily B, member 13##BC011737|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)	0.291232	CTCF.p2:27:0.291
chr12	107958921	107959019	reg1028395.p2	5.040	+	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	-246757	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-471360	-	BC030519 TSC_hg19_v1_chr12_-_107487328 D83702	-471637	-	AK127295 NM_001017523	15663	+	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	120697	+	AK056378 TSC_hg19_v1_chr12_-_108154899	195869	-	BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##BC030519|CRY1|1407|cryptochrome 1 (photolyase-like)##D83702|CRY1|1407|cryptochrome 1 (photolyase-like)##AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK056378|PRDM4|11108|PR domain containing 4	0.0	
chr12	111325770	111325916	reg1002665.p1	5.040	+	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-41040	+	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	-145087	-	TSC_hg19_v1_chr12_-_111180641 X74008 BC014073	-145187	-	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	32535	-	BC151245 NM_015267 AB006631 AF271236	146029	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	481003	-	AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##X74008|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC014073|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A	0.0	
chr14	99859530	99859641	reg1027949.p1	5.040	+	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	-121695	-	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	-121968	-	AK098639 NM_182560	-681636	+	BC120967 BC120968 BC127624 BC127625 TSC_hg19_v1_chr14_-_99947104	87509	-	TSC_hg19_v1_chr14_-_99947132 BC066931 BX161441	87537	-	TSC_hg19_v1_chr14_-_99947170 BC037395	87594	-	AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##BC120967|SETD3|84193|SET domain containing 3##BC120968|SETD3|84193|SET domain containing 3##BC127624|SETD3|84193|SET domain containing 3##BC127625|SETD3|84193|SET domain containing 3##BC066931|SETD3|84193|SET domain containing 3##BX161441|SETD3|84193|SET domain containing 3##BC037395|SETD3|84193|SET domain containing 3	0.889775	CTCF.p2:-1:0.890
chr16	22210326	22210507	reg1031057.p2	5.040	+	AK098260 AK128606 AK307544 NM_173615	-106555	+	TSC_hg19_v1_chr16_+_22019464 NM_001164579 BC027604 BC053950	-190928	+	BC039562 BC021724 BC028605 NM_173806	-197988	-	TSC_hg19_v1_chr16_+_22217630 NM_013302 AK308757 BC032665	7257	+	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	98332	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	175379	-	AK098260|VWA3A|146177|von Willebrand factor A domain containing 3A##AK128606|VWA3A|146177|von Willebrand factor A domain containing 3A##AK307544|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_173615|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_001164579|C16orf52|730094|chromosome 16 open reading frame 52##BC027604|C16orf52|730094|chromosome 16 open reading frame 52##BC053950|C16orf52|730094|chromosome 16 open reading frame 52##BC039562|PDZD9|255762|PDZ domain containing 9##BC021724|PDZD9|255762|PDZ domain containing 9##BC028605|PDZD9|255762|PDZ domain containing 9##NM_173806|PDZD9|255762|PDZ domain containing 9##NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase##BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	0.826321	CTCF.p2:9:0.826
chr20	20111221	20111357	reg1028926.p1	5.040	+	NM_001167816 AL117439	-73969	+	BC144222 AF255443 AF318303 AF318304 AF318305 NM_016652	-74602	-	AK307817 NM_015585 AK304174 BC028708	-78113	+	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	237465	+	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	581939	-	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	995375	+	NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AK307817|C20orf26|26074|chromosome 20 open reading frame 26##NM_015585|C20orf26|26074|chromosome 20 open reading frame 26##AK304174|C20orf26|26074|chromosome 20 open reading frame 26##BC028708|C20orf26|26074|chromosome 20 open reading frame 26##M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1	0.597244	CTCF.p2:-18:0.597
chr20	46523519	46523692	reg1029765.p1	5.040	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-108287	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-108853	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-392921	+	AB037836 TSC_hg19_v1_chr20_-_47444291	920681	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	920834	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	1014713	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr2	85779188	85779265	reg1001306.p1	5.040	+	TSC_hg19_v1_chr2_+_85766291 AK291126 BC001686 BC001854 X68836 DQ083239 AB529143 CU674832	-12876	+	TSC_hg19_v1_chr2_+_85766290 AK294208 AK293841 AK297758 AK297797 AK303877 AK308591 AK311142 AK311612	-12938	+	NM_005911	-13126	+	CU680718 DQ892948 DQ896196 EU847509 TSC_hg19_v1_chr2_-_85788597 BC013979 AK310483 AK297397 BC004422 AK222827 AK225663 AK298982 AK313126 M81592	9365	-	TSC_hg19_v1_chr2_-_85788644 NM_000821 NM_001142269	9429	-	NM_003761 TSC_hg19_v1_chr2_+_85804673	25423	+	AK291126|MAT2A|4144|methionine adenosyltransferase II, alpha##BC001686|MAT2A|4144|methionine adenosyltransferase II, alpha##BC001854|MAT2A|4144|methionine adenosyltransferase II, alpha##X68836|MAT2A|4144|methionine adenosyltransferase II, alpha##DQ083239|MAT2A|4144|methionine adenosyltransferase II, alpha##AK293841|MAT2A|4144|methionine adenosyltransferase II, alpha##AK297758|MAT2A|4144|methionine adenosyltransferase II, alpha##AK297797|MAT2A|4144|methionine adenosyltransferase II, alpha##AK303877|MAT2A|4144|methionine adenosyltransferase II, alpha##AK308591|MAT2A|4144|methionine adenosyltransferase II, alpha##NM_005911|MAT2A|4144|methionine adenosyltransferase II, alpha##DQ892948|GGCX|2677|gamma-glutamyl carboxylase##DQ896196|GGCX|2677|gamma-glutamyl carboxylase##EU847509|GGCX|2677|gamma-glutamyl carboxylase##BC013979|GGCX|2677|gamma-glutamyl carboxylase##AK310483|GGCX|2677|gamma-glutamyl carboxylase##AK297397|GGCX|2677|gamma-glutamyl carboxylase##BC004422|GGCX|2677|gamma-glutamyl carboxylase##AK222827|GGCX|2677|gamma-glutamyl carboxylase##AK225663|GGCX|2677|gamma-glutamyl carboxylase##AK298982|GGCX|2677|gamma-glutamyl carboxylase##AK313126|GGCX|2677|gamma-glutamyl carboxylase##M81592|GGCX|2677|gamma-glutamyl carboxylase##NM_000821|GGCX|2677|gamma-glutamyl carboxylase##NM_001142269|GGCX|2677|gamma-glutamyl carboxylase##NM_003761|VAMP8|8673|vesicle-associated membrane protein 8 (endobrevin)	0.0	
chr3	53711577	53711698	reg1029216.p1	5.040	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	-182526	+	TSC_hg19_v1_chr3_+_53528709 M76558	-182978	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	-330044	-	TSC_hg19_v1_chr3_-_53880427 NM_018397	168782	-	TSC_hg19_v1_chr3_+_53880576 NM_018725	168935	+	TSC_hg19_v1_chr3_+_53880594 AK307749	168958	+	NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018397|CHDH|55349|choline dehydrogenase##NM_018725|IL17RB|55540|interleukin 17 receptor B##AK307749|IL17RB|55540|interleukin 17 receptor B	0.541353	CTCF.p2:-8:0.541
chr6	18303158	18303278	reg1028910.p2	5.040	+	X64229 TSC_hg19_v1_chr6_-_18264759 BC012442 AK312616 AK298089 AK294079 BC035259 AK297749 NM_001134709 NM_003472	-38497	-	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	-147563	+	S62904 AK310420 TSC_hg19_v1_chr6_-_18155309 U12387 BC005339 BC009596 NM_000367	-147890	-	AK096832 NM_182757 AB076367 BC063311 AL832329	84449	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	1534417	+	TSC_hg19_v1_chr6_+_19838612 AF085889	1535465	+	X64229|DEK|7913|DEK oncogene##BC012442|DEK|7913|DEK oncogene##AK312616|DEK|7913|DEK oncogene##AK298089|DEK|7913|DEK oncogene##AK294079|DEK|7913|DEK oncogene##BC035259|DEK|7913|DEK oncogene##AK297749|DEK|7913|DEK oncogene##NM_001134709|DEK|7913|DEK oncogene##NM_003472|DEK|7913|DEK oncogene##BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B##S62904|TPMT|7172|thiopurine S-methyltransferase##AK310420|TPMT|7172|thiopurine S-methyltransferase##U12387|TPMT|7172|thiopurine S-methyltransferase##BC005339|TPMT|7172|thiopurine S-methyltransferase##BC009596|TPMT|7172|thiopurine S-methyltransferase##NM_000367|TPMT|7172|thiopurine S-methyltransferase##AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein	0.210278	CTCF.p2:0:0.210
chr7	90042339	90042458	reg1028829.p1	5.040	+	TSC_hg19_v1_chr7_+_90032774 AL136770 BC016061	-9594	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	-9694	+	TSC_hg19_v1_chr7_+_89976015 AF351613 NM_001042717 NM_033107 AK095561 BC107714 CR933597 AK294325 BC144162	-66394	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	183411	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	296385	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	296762	+	AL136770|CLDN12|9069|claudin 12##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12##AF351613|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001042717|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_033107|GTPBP10|85865|GTP-binding protein 10 (putative)##AK095561|GTPBP10|85865|GTP-binding protein 10 (putative)##BC107714|GTPBP10|85865|GTP-binding protein 10 (putative)##CR933597|GTPBP10|85865|GTP-binding protein 10 (putative)##AK294325|GTPBP10|85865|GTP-binding protein 10 (putative)##BC144162|GTPBP10|85865|GTP-binding protein 10 (putative)##AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14	0.995481	CTCF.p2:-7:0.995
chr2	102342409	102342519	reg1026147.p2	5.039	+	TSC_hg19_v1_chr2_+_102314168 NM_001242560 NM_004834 NM_145686 BC064691 AK296396 AF096300 NM_001242559 NM_145687 AB384511 AY212247 AY834276	-28112	+	AK131289 AK298610 NM_001145664 TSC_hg19_v1_chr2_-_102091212	-251271	-	TSC_hg19_v1_chr2_-_102003966 BC032949 BC047514 NM_153836 AB046109	-338475	-	TSC_hg19_v1_chr2_+_102508334 BC045694	165878	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	166068	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	265899	+	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK131289|RFX8|731220|regulatory factor X, 8##AK298610|RFX8|731220|regulatory factor X, 8##NM_001145664|RFX8|731220|regulatory factor X, 8##BC032949|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC047514|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_153836|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AB046109|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II	0.704818	CTCF.p2:8:0.705
chr15	99826895	99827075	reg1001070.p2	5.038	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-35343	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-35569	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-37279	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	279168	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	279209	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	279250	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.0	
chr18	29537031	29537151	reg1030364.p1	5.038	+	TSC_hg19_v1_chr18_-_29523092 NM_014939 AL136749	-13983	-	TSC_hg19_v1_chr18_-_29523064 BC059380 AK292537	-14024	-	BC127109 BC127110 TSC_hg19_v1_chr18_-_29523061	-14067	-	AK000463 AK225518 NM_017831	61353	+	TSC_hg19_v1_chr18_+_29598794 BC012021 CU680164	61715	+	NM_016271 TSC_hg19_v1_chr18_+_29671843	134745	+	NM_014939|TRAPPC8|22878|trafficking protein particle complex 8##AL136749|TRAPPC8|22878|trafficking protein particle complex 8##BC059380|TRAPPC8|22878|trafficking protein particle complex 8##AK292537|TRAPPC8|22878|trafficking protein particle complex 8##BC127109|TRAPPC8|22878|trafficking protein particle complex 8##BC127110|TRAPPC8|22878|trafficking protein particle complex 8##AK000463|RNF125|54941|ring finger protein 125##AK225518|RNF125|54941|ring finger protein 125##NM_017831|RNF125|54941|ring finger protein 125##BC012021|RNF125|54941|ring finger protein 125##NM_016271|RNF138|51444|ring finger protein 138	0.0	
chr6	83422694	83422804	reg1027074.p2	5.038	+	TSC_hg19_v1_chr6_+_83073996 AK074790 NM_001166392	-348772	+	TSC_hg19_v1_chr6_+_83073565 BC037161 AK074786	-349216	+	AK291170 NM_006670	-349827	+	TSC_hg19_v1_chr6_-_83775541 BC101512 BC101538 BC143617 BC036049 AB126062 NM_198920 BC053645 AK298205 BC057845	352776	-	TSC_hg19_v1_chr6_+_83777389 BX648667 NM_001199942 NM_015018 AK094766	354648	+	AF102265 AB032081 AF180371 TSC_hg19_v1_chr6_-_83902977 AK314512 AK225363 AK001365 AK023432 BC001258 NM_001199918 NM_001199919 NM_015599	480223	-	AK074790|TPBG|7162|trophoblast glycoprotein##NM_001166392|TPBG|7162|trophoblast glycoprotein##BC037161|TPBG|7162|trophoblast glycoprotein##AK074786|TPBG|7162|trophoblast glycoprotein##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein##BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BX648667|DOPEY1|23033|dopey family member 1##NM_001199942|DOPEY1|23033|dopey family member 1##NM_015018|DOPEY1|23033|dopey family member 1##AK094766|DOPEY1|23033|dopey family member 1##AF102265|PGM3|5238|phosphoglucomutase 3##AB032081|PGM3|5238|phosphoglucomutase 3##AF180371|PGM3|5238|phosphoglucomutase 3##AK314512|PGM3|5238|phosphoglucomutase 3##AK225363|PGM3|5238|phosphoglucomutase 3##AK001365|PGM3|5238|phosphoglucomutase 3##AK023432|PGM3|5238|phosphoglucomutase 3##BC001258|PGM3|5238|phosphoglucomutase 3##NM_001199918|PGM3|5238|phosphoglucomutase 3##NM_001199919|PGM3|5238|phosphoglucomutase 3##NM_015599|PGM3|5238|phosphoglucomutase 3	0.209438	CTCF.p2:6:0.209
chr7	102085538	102085719	reg1026774.p1	5.038	+	TSC_hg19_v1_chr7_+_102074021 AK056497 AK027639 AK300574	-11587	+	TSC_hg19_v1_chr7_+_102073995 NM_001126340 NM_032831	-11651	+	NM_024653 TSC_hg19_v1_chr7_+_102036839 AK023964 BC014298 DQ893168 DQ896466 AK294664	-48786	+	TSC_hg19_v1_chr7_-_102105305 CU678220 BC002820 BC017096	19605	-	AK000020 TSC_hg19_v1_chr7_-_102105307 AK026097 AK222689 NM_017621	19689	-	TSC_hg19_v1_chr7_+_102105430 AL133057 BC030547 NM_152892 AK290967 AK313771	19780	+	AK056497|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK027639|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK300574|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_001126340|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_032831|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_024653|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK023964|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##BC014298|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ893168|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ896466|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK294664|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##BC002820|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##BC017096|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK000020|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK026097|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK222689|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##NM_017621|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AL133057|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##BC030547|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##NM_152892|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK290967|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK313771|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1	0.0	
chr9	104490589	104490688	reg1025491.p2	5.038	+	AF085237 AF145026 BC066299 AK057524 AK302547 AF400667 BC030595 NM_147180 AK310471	-133386	-	TSC_hg19_v1_chr9_+_104296175 AK314401	-194468	+	TSC_hg19_v1_chr9_+_104296143 BC016691 BC063115	-194491	+	TSC_hg19_v1_chr9_-_104500218 AB385519 AF416558 AJ416950	9607	-	AB075853 BC167432 NM_133445 TSC_hg19_v1_chr9_-_104500930	10263	-	BC058038 NM_001340 AK313349 BC114547 Z46788	1266989	+	AF085237|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF145026|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC066299|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AK057524|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF400667|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC030595|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##NM_147180|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AK314401|RNF20|56254|ring finger protein 20##BC016691|RNF20|56254|ring finger protein 20##BC063115|RNF20|56254|ring finger protein 20##AF416558|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AJ416950|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AB075853|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##BC167432|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##NM_133445|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##BC058038|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##NM_001340|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##AK313349|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##BC114547|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##Z46788|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	0.0	
chr15	101112693	101112874	reg1028755.p1	5.037	+	BC034500 BC034970 NM_178842	-27886	-	AB527357 AJ315735 NM_139057	-230640	-	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-839149	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	29626	-	NM_024708 NM_198243 TSC_hg19_v1_chr15_+_101142810 AK289860 BC063581 AF451994 AK026204 AK222958 AK222974 BC025252	30012	+	TSC_hg19_v1_chr15_+_101390032 AK056534	277250	+	BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)##NM_024708|ASB7|140460|ankyrin repeat and SOCS box containing 7##NM_198243|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK289860|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC063581|ASB7|140460|ankyrin repeat and SOCS box containing 7##AF451994|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK026204|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222958|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222974|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC025252|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK056534|LOC145757|145757|uncharacterized LOC145757	0.629848	CTCF.p2:13:0.630
chr15	82815295	82815429	reg1012602.p2	5.037	+	NM_198181 CR936812	-93146	+	TSC_hg19_v1_chr15_+_82647308 BC066934	-168031	+	NM_001164465	-173657	-	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	9531	-	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	129430	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	129528	+	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like	0.924807	CTCF.p2:3:0.925
chr20	61371501	61371621	reg1019862.p2	5.037	+	TSC_hg19_v1_chr20_+_61340165 NM_002531 X70070	-31385	+	TSC_hg19_v1_chr20_+_61273854 BC015727 AK023410 AF205072 AF104334	-97714	+	TSC_hg19_v1_chr20_+_61273818 NM_016354	-97758	+	AK001776 NM_018270 TSC_hg19_v1_chr20_+_61427832 BC014235 BC009889 BC018841 AB085682 AB463516	56286	+	TSC_hg19_v1_chr20_+_61436186 NM_007346 AK314696 AK022234 AF109134 BC008768 BC014137 CU680798 DQ892943 EU176723 BC032666	64632	+	TSC_hg19_v1_chr20_+_61448401 BC011705 NM_001853 DQ892946 DQ896194 L41162	76842	+	NM_002531|NTSR1|4923|neurotensin receptor 1 (high affinity)##X70070|NTSR1|4923|neurotensin receptor 1 (high affinity)##BC015727|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AK023410|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AF205072|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AF104334|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##NM_016354|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AK001776|C20orf20|55257|chromosome 20 open reading frame 20##NM_018270|C20orf20|55257|chromosome 20 open reading frame 20##BC014235|C20orf20|55257|chromosome 20 open reading frame 20##BC009889|C20orf20|55257|chromosome 20 open reading frame 20##BC018841|C20orf20|55257|chromosome 20 open reading frame 20##AB085682|C20orf20|55257|chromosome 20 open reading frame 20##NM_007346|OGFR|11054|opioid growth factor receptor##AK314696|OGFR|11054|opioid growth factor receptor##AK022234|OGFR|11054|opioid growth factor receptor##AF109134|OGFR|11054|opioid growth factor receptor##BC008768|OGFR|11054|opioid growth factor receptor##BC014137|OGFR|11054|opioid growth factor receptor##DQ892943|OGFR|11054|opioid growth factor receptor##EU176723|OGFR|11054|opioid growth factor receptor##BC032666|OGFR|11054|opioid growth factor receptor##BC011705|COL9A3|1299|collagen, type IX, alpha 3##NM_001853|COL9A3|1299|collagen, type IX, alpha 3##DQ892946|COL9A3|1299|collagen, type IX, alpha 3##DQ896194|COL9A3|1299|collagen, type IX, alpha 3##L41162|COL9A3|1299|collagen, type IX, alpha 3	0.0	
chr7	74002054	74002235	reg1026047.p2	5.037	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	-133709	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	-133836	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	-133980	+	AK292832 TSC_hg19_v1_chr7_+_74072028 AF015553 NM_001163636 NM_001518 NM_032999 NM_033000 NM_033001	69877	+	TSC_hg19_v1_chr7_+_74072046 BC070484	69900	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	69978	+	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AK292832|GTF2I|2969|general transcription factor IIi##AF015553|GTF2I|2969|general transcription factor IIi##NM_001163636|GTF2I|2969|general transcription factor IIi##NM_001518|GTF2I|2969|general transcription factor IIi##NM_032999|GTF2I|2969|general transcription factor IIi##NM_033000|GTF2I|2969|general transcription factor IIi##NM_033001|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi	0.0	
chr10	15786370	15786482	reg1024110.p1	5.036	+	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	-24633	-	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	-373277	-	BT007024 CU675371 DQ890667 DQ893848 BC006376 AK315085 AK094904 AF043325 TSC_hg19_v1_chr10_-_15210693 NM_004808	-575765	-	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	116065	-	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	692559	+	NM_001010908	777577	-	L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##BT007024|NMT2|9397|N-myristoyltransferase 2##DQ890667|NMT2|9397|N-myristoyltransferase 2##DQ893848|NMT2|9397|N-myristoyltransferase 2##BC006376|NMT2|9397|N-myristoyltransferase 2##AK315085|NMT2|9397|N-myristoyltransferase 2##AK094904|NMT2|9397|N-myristoyltransferase 2##AF043325|NMT2|9397|N-myristoyltransferase 2##NM_004808|NMT2|9397|N-myristoyltransferase 2##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related##NM_001010908|C1QL3|389941|complement component 1, q subcomponent-like 3	0.999506	CTCF.p2:22:1.000
chr19	18891634	18891734	reg1025995.p2	5.036	+	U75488 TSC_hg19_v1_chr19_-_18888853	-2894	-	AY360171 TSC_hg19_v1_chr19_+_18794489 BC028050 AB527764 CU688378 DQ893310 DQ894228 AB014516	-97161	+	TSC_hg19_v1_chr19_+_18794453 AK024089 AY040323 NM_001098482 NM_015321	-97260	+	AB086984 BC033676 BC110847 L32137 BC125092 TSC_hg19_v1_chr19_-_18902115 AK074508 AK223216 AK290595 AK296586 AK297798 AK297814 NM_000095	10413	-	TSC_hg19_v1_chr19_+_18942742 NM_002911 BC039817	51061	+	TSC_hg19_v1_chr19_+_18942822 U65533 AF074016 D86988 U59323	51129	+	AY360171|CRTC1|23373|CREB regulated transcription coactivator 1##BC028050|CRTC1|23373|CREB regulated transcription coactivator 1##DQ893310|CRTC1|23373|CREB regulated transcription coactivator 1##DQ894228|CRTC1|23373|CREB regulated transcription coactivator 1##AB014516|CRTC1|23373|CREB regulated transcription coactivator 1##AK024089|CRTC1|23373|CREB regulated transcription coactivator 1##AY040323|CRTC1|23373|CREB regulated transcription coactivator 1##NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1##NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1##AB086984|COMP|1311|cartilage oligomeric matrix protein##BC033676|COMP|1311|cartilage oligomeric matrix protein##BC110847|COMP|1311|cartilage oligomeric matrix protein##L32137|COMP|1311|cartilage oligomeric matrix protein##BC125092|COMP|1311|cartilage oligomeric matrix protein##AK074508|COMP|1311|cartilage oligomeric matrix protein##AK223216|COMP|1311|cartilage oligomeric matrix protein##AK290595|COMP|1311|cartilage oligomeric matrix protein##AK296586|COMP|1311|cartilage oligomeric matrix protein##AK297798|COMP|1311|cartilage oligomeric matrix protein##AK297814|COMP|1311|cartilage oligomeric matrix protein##NM_000095|COMP|1311|cartilage oligomeric matrix protein##NM_002911|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##BC039817|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##U65533|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##AF074016|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##D86988|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##U59323|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)	0.0	
chr2	100106663	100106819	reg1008189.p1	5.036	+	TSC_hg19_v1_chr2_-_100106480 AF206019 NM_001037872 NM_016316 BC037734	-232	-	TSC_hg19_v1_chr2_-_100106444 AK307719 AB047646 AF357886 AF151538	-301	-	AK025799 TSC_hg19_v1_chr2_-_100046333 AK025176 AJ131720	-60404	-	BC136579 BC144266 U34360 TSC_hg19_v1_chr2_-_100720992	614225	-	TSC_hg19_v1_chr2_-_100721160 AK290468	614442	-	BC040181 TSC_hg19_v1_chr2_+_100721424	614665	+	AF206019|REV1|51455|REV1 homolog (S. cerevisiae)##NM_001037872|REV1|51455|REV1 homolog (S. cerevisiae)##NM_016316|REV1|51455|REV1 homolog (S. cerevisiae)##BC037734|REV1|51455|REV1 homolog (S. cerevisiae)##AK307719|REV1|51455|REV1 homolog (S. cerevisiae)##AB047646|REV1|51455|REV1 homolog (S. cerevisiae)##AF357886|REV1|51455|REV1 homolog (S. cerevisiae)##AF151538|REV1|51455|REV1 homolog (S. cerevisiae)##AK025176|REV1|51455|REV1 homolog (S. cerevisiae)##AJ131720|REV1|51455|REV1 homolog (S. cerevisiae)##BC136579|AFF3|3899|AF4/FMR2 family, member 3##BC144266|AFF3|3899|AF4/FMR2 family, member 3##U34360|AFF3|3899|AF4/FMR2 family, member 3##AK290468|AFF3|3899|AF4/FMR2 family, member 3	0.011481	
chr4	109998020	109998112	reg1029516.p1	5.036	+	AK091888 AX747236 AK294072 AJ298293 AK294235 BC022526 NM_001146590 NM_001146627 NM_031279	-313923	-	AF068297 TSC_hg19_v1_chr4_+_109571786 AK312185 DQ893222 DQ896551 AF343342	-426271	+	TSC_hg19_v1_chr4_+_109571754 NM_021227 BC054857 BC016321 AF161425 AF201937	-426313	+	AF293340 AF293341 NM_032518 NM_198721 TSC_hg19_v1_chr4_-_110223816	225741	-	TSC_hg19_v1_chr4_+_110354836 AJ131245	356781	+	TSC_hg19_v1_chr4_-_110354918 BC009800	356877	-	AK091888|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294072|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AJ298293|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AK294235|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##BC022526|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146590|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_001146627|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##NM_031279|AGXT2L1|64850|alanine-glyoxylate aminotransferase 2-like 1##AF068297|OSTC|58505|oligosaccharyltransferase complex subunit##AK312185|OSTC|58505|oligosaccharyltransferase complex subunit##DQ893222|OSTC|58505|oligosaccharyltransferase complex subunit##DQ896551|OSTC|58505|oligosaccharyltransferase complex subunit##AF343342|OSTC|58505|oligosaccharyltransferase complex subunit##NM_021227|OSTC|58505|oligosaccharyltransferase complex subunit##BC054857|OSTC|58505|oligosaccharyltransferase complex subunit##BC016321|OSTC|58505|oligosaccharyltransferase complex subunit##AF161425|OSTC|58505|oligosaccharyltransferase complex subunit##AF201937|OSTC|58505|oligosaccharyltransferase complex subunit##AF293340|COL25A1|84570|collagen, type XXV, alpha 1##AF293341|COL25A1|84570|collagen, type XXV, alpha 1##NM_032518|COL25A1|84570|collagen, type XXV, alpha 1##NM_198721|COL25A1|84570|collagen, type XXV, alpha 1##AJ131245|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC009800|1/2-SBSRNA4|100533182|lncRNA_BC009800	0.893188	CTCF.p2:-18:0.893
chr4	7240158	7240294	reg1029280.p2	5.036	+	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-45831	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-170425	-	AF298592 DQ891523 DQ894713 TSC_hg19_v1_chr4_-_7069792 AK098475 AK301695 AK312882 BC024242 NM_025196	-170449	-	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	196430	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	701162	-	TSC_hg19_v1_chr4_-_8073714 AK094798	833490	-	NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AF298592|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ891523|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ894713|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK098475|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK301695|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK312882|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##BC024242|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##NM_025196|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2	0.762405	CTCF.p2:-3:0.762
chr6	18121947	18122048	reg1012354.p1	5.036	+	TSC_hg19_v1_chr6_-_17987867 BC062673 NM_001105566 NM_001105567 NM_001105568 NM_001243423 NM_022113	-134131	-	AJ291578 AJ291579 BC127115 BC127116 AY014403 AY014404 TSC_hg19_v1_chr6_-_17987786	-134237	-	Z25535 AB384675 AK295644 BC052965 NM_005124 TSC_hg19_v1_chr6_-_17707139 AB210024	-415095	-	AY324850 BC103888 BC103889 BC103890 NM_198586	853	-	S62904 AK310420 TSC_hg19_v1_chr6_-_18155309 U12387 BC005339 BC009596 NM_000367	33331	-	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	33658	+	BC062673|KIF13A|63971|kinesin family member 13A##NM_001105566|KIF13A|63971|kinesin family member 13A##NM_001105567|KIF13A|63971|kinesin family member 13A##NM_001105568|KIF13A|63971|kinesin family member 13A##NM_001243423|KIF13A|63971|kinesin family member 13A##NM_022113|KIF13A|63971|kinesin family member 13A##AJ291578|KIF13A|63971|kinesin family member 13A##AJ291579|KIF13A|63971|kinesin family member 13A##BC127115|KIF13A|63971|kinesin family member 13A##BC127116|KIF13A|63971|kinesin family member 13A##AY014403|KIF13A|63971|kinesin family member 13A##AY014404|KIF13A|63971|kinesin family member 13A##Z25535|NUP153|9972|nucleoporin 153kDa##AK295644|NUP153|9972|nucleoporin 153kDa##BC052965|NUP153|9972|nucleoporin 153kDa##NM_005124|NUP153|9972|nucleoporin 153kDa##AB210024|NUP153|9972|nucleoporin 153kDa##AY324850|NHLRC1|378884|NHL repeat containing 1##BC103888|NHLRC1|378884|NHL repeat containing 1##BC103889|NHLRC1|378884|NHL repeat containing 1##BC103890|NHLRC1|378884|NHL repeat containing 1##NM_198586|NHLRC1|378884|NHL repeat containing 1##S62904|TPMT|7172|thiopurine S-methyltransferase##AK310420|TPMT|7172|thiopurine S-methyltransferase##U12387|TPMT|7172|thiopurine S-methyltransferase##BC005339|TPMT|7172|thiopurine S-methyltransferase##BC009596|TPMT|7172|thiopurine S-methyltransferase##NM_000367|TPMT|7172|thiopurine S-methyltransferase##BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B	0.0	
chrUn_gl000227	83379	83502	reg1029913.p2	5.036	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.980068	CTCF.p2:-8:0.980
chr10	74095311	74095492	reg1020154.p3	5.035	+	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-61577	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-119290	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-119613	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	19277	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	19525	-	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	188318	-	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1	0.256592	CTCF.p2:-56:0.257
chr11	124746253	124746399	reg1030710.p1	5.035	+	AY509035 TSC_hg19_v1_chr11_+_124735327 AK056544 NM_022370 AK291045	-11001	+	TSC_hg19_v1_chr11_-_124670286 BC064919 AK026995 NM_024631	-76007	-	TSC_hg19_v1_chr11_-_124670282 AK303902	-76057	-	TSC_hg19_v1_chr11_+_124746737 AK024697 AK225076 AK298792 AK295475	404	+	AY358083 AK074163 AK302628 BC064643 BC039602 BC111562 BC111748 AK027852 AK289769 AF361473 NM_019055	21429	-	AY275431 NM_001037558	42819	+	AY509035|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##NM_022370|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK291045|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##BC064919|C11orf61|79684|chromosome 11 open reading frame 61##AK026995|C11orf61|79684|chromosome 11 open reading frame 61##NM_024631|C11orf61|79684|chromosome 11 open reading frame 61##AK303902|C11orf61|79684|chromosome 11 open reading frame 61##AK024697|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK225076|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK298792|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK295475|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AY358083|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK074163|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK302628|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC064643|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC039602|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC111562|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC111748|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK027852|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK289769|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AF361473|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##NM_019055|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AY275431|HEPN1|641654|hepatocellular carcinoma, down-regulated 1##NM_001037558|HEPN1|641654|hepatocellular carcinoma, down-regulated 1	0.996726	CTCF.p2:-12:0.997
chr12	8526480	8526578	reg1027668.p1	5.035	+	BC042608 AK001270 NM_018088	-146326	-	TSC_hg19_v1_chr12_+_8332811 AK096301 BC048994 AK311411 BC034777	-193703	+	NM_001004328	-201380	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	82073	+	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	139702	+	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	166945	-	BC042608|FAM90A1|55138|family with sequence similarity 90, member A1##AK001270|FAM90A1|55138|family with sequence similarity 90, member A1##NM_018088|FAM90A1|55138|family with sequence similarity 90, member A1##AK096301|FAM66C|440078|family with sequence similarity 66, member C##BC048994|FAM66C|440078|family with sequence similarity 66, member C##BC034777|FAM66C|440078|family with sequence similarity 66, member C##NM_001004328|ZNF705A|440077|zinc finger protein 705A##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E	0.0	
chr14	105407204	105407321	reg1029818.p1	5.035	+	TSC_hg19_v1_chr14_+_105391215 AK090449 BC015003	-16037	+	TSC_hg19_v1_chr14_+_105391174 AY358843 NM_138790	-16086	+	TSC_hg19_v1_chr14_+_105391155 AK295352	-16105	+	TSC_hg19_v1_chr14_-_105436817 BC004283 AK094143	29558	-	NM_138420 TSC_hg19_v1_chr14_-_105444718	37446	-	AK057249 NM_174891 BC137495 BC144671	45381	+	BC015003|PLD4|122618|phospholipase D family, member 4##AY358843|PLD4|122618|phospholipase D family, member 4##NM_138790|PLD4|122618|phospholipase D family, member 4##AK295352|PLD4|122618|phospholipase D family, member 4##BC004283|AHNAK2|113146|AHNAK nucleoprotein 2##AK094143|AHNAK2|113146|AHNAK nucleoprotein 2##NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2##AK057249|C14orf79|122616|chromosome 14 open reading frame 79##NM_174891|C14orf79|122616|chromosome 14 open reading frame 79##BC137495|C14orf79|122616|chromosome 14 open reading frame 79##BC144671|C14orf79|122616|chromosome 14 open reading frame 79	0.425632	CTCF.p2:23:0.426
chr17	37828518	37828699	reg1022058.p2	5.035	+	BC037246 NM_002686	-4102	+	NM_003673 BC012628 BC013330 AJ000491 DQ892812 DQ896058	-7004	+	NM_001165937 NM_001165938 NM_006804 TSC_hg19_v1_chr17_+_37793404 BC008356 AK301524 AK303114 AK300176 AK225069 BC025679 BC008747 D38255 BC019286 X80198 AK300842	-35221	+	CU679785 AY358437 TSC_hg19_v1_chr17_-_37844279 AB088396 AK314469 BC010652 AK057911 AK075474 AK289612 AK294639 AK301106 NM_033419	15679	-	TSC_hg19_v1_chr17_+_37844346 AK295195 AB025286 BC110392 NM_001005862	15750	+	TSC_hg19_v1_chr17_+_37856197 AB587321	27588	+	BC037246|PNMT|5409|phenylethanolamine N-methyltransferase##NM_002686|PNMT|5409|phenylethanolamine N-methyltransferase##NM_003673|TCAP|8557|titin-cap (telethonin)##BC012628|TCAP|8557|titin-cap (telethonin)##BC013330|TCAP|8557|titin-cap (telethonin)##AJ000491|TCAP|8557|titin-cap (telethonin)##DQ892812|TCAP|8557|titin-cap (telethonin)##DQ896058|TCAP|8557|titin-cap (telethonin)##NM_001165937|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##NM_001165938|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##NM_006804|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC008356|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK301524|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK303114|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK300176|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK225069|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC025679|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC008747|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##D38255|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC019286|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##X80198|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK300842|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AY358437|PGAP3|93210|post-GPI attachment to proteins 3##AB088396|PGAP3|93210|post-GPI attachment to proteins 3##AK314469|PGAP3|93210|post-GPI attachment to proteins 3##BC010652|PGAP3|93210|post-GPI attachment to proteins 3##AK057911|PGAP3|93210|post-GPI attachment to proteins 3##AK075474|PGAP3|93210|post-GPI attachment to proteins 3##AK289612|PGAP3|93210|post-GPI attachment to proteins 3##AK294639|PGAP3|93210|post-GPI attachment to proteins 3##AK301106|PGAP3|93210|post-GPI attachment to proteins 3##NM_033419|PGAP3|93210|post-GPI attachment to proteins 3##AK295195|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##AB025286|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##BC110392|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##NM_001005862|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	0.945179	CTCF.p2:-3:0.945
chr19	14309229	14309405	reg1027866.p1	5.035	+	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	-48517	-	TSC_hg19_v1_chr19_+_14247979 BX537706	-61326	+	AK302134 TSC_hg19_v1_chr19_-_14247402 BC036521 AK001466 NM_018154	-61895	-	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	7731	-	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	182732	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	182938	+	BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##AK302134|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC036521|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK001466|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##NM_018154|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule	0.0	
chr2	106406351	106406472	reg1027693.p1	5.035	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	-44868	+	NM_201557	-351182	-	TSC_hg19_v1_chr2_-_106015453 BC093049 CR936799 BC036085 BC021049 AK313841 L42176 NM_001039492 BC012742 BC014397 DQ266432 NM_001450 NM_201555	-390860	-	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	26564	+	NM_001004720 BC000103	61850	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	275753	+	NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##NM_201557|FHL2|2274|four and a half LIM domains 2##BC093049|FHL2|2274|four and a half LIM domains 2##CR936799|FHL2|2274|four and a half LIM domains 2##BC036085|FHL2|2274|four and a half LIM domains 2##AK313841|FHL2|2274|four and a half LIM domains 2##L42176|FHL2|2274|four and a half LIM domains 2##NM_001039492|FHL2|2274|four and a half LIM domains 2##BC012742|FHL2|2274|four and a half LIM domains 2##BC014397|FHL2|2274|four and a half LIM domains 2##DQ266432|FHL2|2274|four and a half LIM domains 2##NM_001450|FHL2|2274|four and a half LIM domains 2##NM_201555|FHL2|2274|four and a half LIM domains 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40	0.697477	CTCF.p2:13:0.697
chr22	42487108	42487288	reg1004410.p2	5.035	+	TSC_hg19_v1_chr22_+_42486980 AK123630 BC039542	-172	+	TSC_hg19_v1_chr22_-_42486777 AB528478 CU013129 CU013417 CR456529 NM_002490	-372	-	TSC_hg19_v1_chr22_-_42486764 CR456714 CR541997 CU678184 DQ892966 DQ896214 BC002772 AF047182 AK316562 AK291874	-446	-	AB463001 CU013213 CU013501 M20403 X08006 BC066877 BC067432 TSC_hg19_v1_chr22_-_42526809 BC106757 BC106758 BC126858 CR456430 BC075023 BC075024	39609	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	39683	-	AB527391 NM_005650 NM_181492	124179	-	AK123630|LOC100132273|100132273|uncharacterized LOC100132273##BC039542|LOC100132273|100132273|uncharacterized LOC100132273##CU013129|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CU013417|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR456529|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##NM_002490|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR456714|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR541997|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##DQ892966|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##DQ896214|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##BC002772|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##AF047182|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##AK316562|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##AK291874|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CU013213|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013501|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##M20403|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##X08006|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC066877|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC067432|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106757|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106758|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC126858|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CR456430|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075023|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075024|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)	0.097708	
chr9	87582156	87582323	reg1026280.p1	5.035	+	U12140 TSC_hg19_v1_chr9_+_87285349	-296907	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-297487	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-297543	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	774632	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	973835	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	973939	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.33136	CTCF.p2:3:0.331
chr13	24281958	24282080	reg1027745.p1	5.034	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	-128487	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-137564	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-274179	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	180997	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	181495	-	NM_001135816 BC142999	181573	+	BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.919298	CTCF.p2:3:0.919
chr16	2904817	2904933	reg1026748.p2	5.034	+	NM_145252 AY359021 JN411265 BC009722 AB528168 AM392915 AM393869 EF067313 AK311810	-24637	+	BC074999 BC075000 TSC_hg19_v1_chr16_+_2867242 AY359034 AF058300 AB031329 AB031330	-37629	+	NM_006799 NM_144956 NM_144957 AB031331 TSC_hg19_v1_chr16_+_2867207	-37690	+	CU679465 AB010779 AF321182 BC009726 AY358396 NM_022119	3262	-	NM_001142499 NM_001142500 NM_138439 TSC_hg19_v1_chr16_+_2933215 BC014089	28381	+	TSC_hg19_v1_chr16_+_2961983 BC028572 NM_020912 NM_032296	57089	+	NM_145252|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AY359021|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##JN411265|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC009722|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM392915|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM393869|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##EF067313|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AK311810|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC074999|PRSS21|10942|protease, serine, 21 (testisin)##BC075000|PRSS21|10942|protease, serine, 21 (testisin)##AY359034|PRSS21|10942|protease, serine, 21 (testisin)##AF058300|PRSS21|10942|protease, serine, 21 (testisin)##AB031329|PRSS21|10942|protease, serine, 21 (testisin)##AB031330|PRSS21|10942|protease, serine, 21 (testisin)##NM_006799|PRSS21|10942|protease, serine, 21 (testisin)##NM_144956|PRSS21|10942|protease, serine, 21 (testisin)##NM_144957|PRSS21|10942|protease, serine, 21 (testisin)##AB031331|PRSS21|10942|protease, serine, 21 (testisin)##AB010779|PRSS22|64063|protease, serine, 22##AF321182|PRSS22|64063|protease, serine, 22##BC009726|PRSS22|64063|protease, serine, 22##AY358396|PRSS22|64063|protease, serine, 22##NM_022119|PRSS22|64063|protease, serine, 22##NM_001142499|FLYWCH2|114984|FLYWCH family member 2##NM_001142500|FLYWCH2|114984|FLYWCH family member 2##NM_138439|FLYWCH2|114984|FLYWCH family member 2##BC014089|FLYWCH2|114984|FLYWCH family member 2##BC028572|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_020912|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_032296|FLYWCH1|84256|FLYWCH-type zinc finger 1	0.947178	CTCF.p2:24:0.947
chr11	20894753	20894854	reg1023448.p1	5.033	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	-203611	+	NM_004211 AF085412	-273856	+	BC047226 TSC_hg19_v1_chr11_+_20409261 AK301449 AK298185 AK300591 BC037544 AB590779 EU831425 EU831518	-485543	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	1319844	+	AB032435 NM_020346	1464863	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	1752558	-	AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##BC047226|PRMT3|10196|protein arginine methyltransferase 3##AK301449|PRMT3|10196|protein arginine methyltransferase 3##AK298185|PRMT3|10196|protein arginine methyltransferase 3##AK300591|PRMT3|10196|protein arginine methyltransferase 3##BC037544|PRMT3|10196|protein arginine methyltransferase 3##EU831425|PRMT3|10196|protein arginine methyltransferase 3##EU831518|PRMT3|10196|protein arginine methyltransferase 3##AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F	0.03771	
chr1	166059219	166059350	reg1029072.p1	5.033	+	AF236637 AK294537 TSC_hg19_v1_chr1_+_165797063 AB062451	-262198	+	TSC_hg19_v1_chr1_+_165796794 NM_012474 BC002906	-262513	+	AK124964 BC009228 TSC_hg19_v1_chr1_+_165738255 BC071770	-321063	+	TSC_hg19_v1_chr1_-_166135951 NM_001017961	76670	-	TSC_hg19_v1_chr1_-_166135982 AB593134	76701	-	TSC_hg19_v1_chr1_-_166136076 BC114214	76856	-	AF236637|UCK2|7371|uridine-cytidine kinase 2##AK294537|UCK2|7371|uridine-cytidine kinase 2##AB062451|UCK2|7371|uridine-cytidine kinase 2##NM_012474|UCK2|7371|uridine-cytidine kinase 2##BC002906|UCK2|7371|uridine-cytidine kinase 2##AK124964|LOC100147773|100147773|uncharacterized LOC100147773##BC009228|LOC100147773|100147773|uncharacterized LOC100147773##BC071770|LOC100147773|100147773|uncharacterized LOC100147773##NM_001017961|FAM78B|149297|family with sequence similarity 78, member B##BC114214|FAM78B|149297|family with sequence similarity 78, member B	0.01313	
chr9	45987848	45987958	reg1028019.p1	5.033	+	TSC_hg19_v1_chr9_+_45441926 BC006438	-545977	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-2303060	+	NM_001145196	-2357174	-	BC040528 NM_001113541 NM_015667	19521706	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	20469398	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	20470593	-	BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.990956	CTCF.p2:6:0.980
chr9	46617051	46617153	reg1029817.p1	5.033	+	TSC_hg19_v1_chr9_+_45441926 BC006438	-1175176	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-2932259	+	NM_001145196	-2986373	-	BC040528 NM_001113541 NM_015667	18892507	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	19840199	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	19841394	-	BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.990956	CTCF.p2:7:0.980
chr10	121651913	121652094	reg1027623.p1	5.032	+	AK023143 TSC_hg19_v1_chr10_-_121632359 BC004183 BC007219 NM_024834	-19663	-	TSC_hg19_v1_chr10_-_121602031 BC000935	-49940	-	NM_001243194 AK123633	-73227	+	NM_007190 TSC_hg19_v1_chr10_+_121652241 AB019435 AK021846 AK314592 AK001135 AK001135 AK301517 BC063800 BC063800 BC002540 AF116723 BX649119 BX649119 AB384691 CU687818 BT006755	186	+	NM_001030059 TSC_hg19_v1_chr10_+_122216486 BC101267 BC101268 BC101269 BC122535 BC132787 AK296273 HQ258170 AK310178	564636	+	NM_018117 TSC_hg19_v1_chr10_+_122610771	958725	+	AK023143|MCMBP|79892|minichromosome maintenance complex binding protein##BC004183|MCMBP|79892|minichromosome maintenance complex binding protein##BC007219|MCMBP|79892|minichromosome maintenance complex binding protein##NM_024834|MCMBP|79892|minichromosome maintenance complex binding protein##BC000935|MCMBP|79892|minichromosome maintenance complex binding protein##NM_001243194|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK123633|INPP5F|22876|inositol polyphosphate-5-phosphatase F##NM_007190|SEC23IP|11196|SEC23 interacting protein##AB019435|SEC23IP|11196|SEC23 interacting protein##AK021846|SEC23IP|11196|SEC23 interacting protein##AK314592|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK301517|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC002540|SEC23IP|11196|SEC23 interacting protein##AF116723|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BT006755|SEC23IP|11196|SEC23 interacting protein##NM_001030059|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101267|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101268|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101269|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC122535|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC132787|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##HQ258170|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AK310178|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##NM_018117|WDR11|55717|WD repeat domain 11	0.0	
chr10	15055989	15056128	reg1029052.p1	5.032	+	NM_001080836	-54621	+	CU692508 TSC_hg19_v1_chr10_-_14996096 BC108276 AK022922 BC022254 AF395747 AF395748 AF395749 AF395750 AF395751 AF395752 AJ296101 BC009185 BX648858 AK021422 AK290598 AK307912 NM_001033855 NM_001033857 NM_001033858 NM_022487	-60004	-	NM_001193424 NM_001193426 BC029360 TSC_hg19_v1_chr10_+_14920864 NM_001193425 NM_001193427 AK222565 AK225369 AK027067 CU688630 BC007754 NM_024670	-135219	+	NM_001039702 NM_018324 BC050372 AK001844 AK001968	29869	+	BC029526 AK095538 AK295169 NM_001039844 TSC_hg19_v1_chr10_-_15130776	74716	-	NM_001097590 NM_006414 NM_183005 TSC_hg19_v1_chr10_+_15139195 AK223418	83134	+	NM_001080836|MEIG1|644890|meiosis expressed gene 1 homolog (mouse)##BC108276|DCLRE1C|64421|DNA cross-link repair 1C##AK022922|DCLRE1C|64421|DNA cross-link repair 1C##BC022254|DCLRE1C|64421|DNA cross-link repair 1C##AF395747|DCLRE1C|64421|DNA cross-link repair 1C##AF395748|DCLRE1C|64421|DNA cross-link repair 1C##AF395749|DCLRE1C|64421|DNA cross-link repair 1C##AF395750|DCLRE1C|64421|DNA cross-link repair 1C##AF395751|DCLRE1C|64421|DNA cross-link repair 1C##AF395752|DCLRE1C|64421|DNA cross-link repair 1C##AJ296101|DCLRE1C|64421|DNA cross-link repair 1C##BC009185|DCLRE1C|64421|DNA cross-link repair 1C##BX648858|DCLRE1C|64421|DNA cross-link repair 1C##AK021422|DCLRE1C|64421|DNA cross-link repair 1C##AK290598|DCLRE1C|64421|DNA cross-link repair 1C##AK307912|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033855|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033857|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033858|DCLRE1C|64421|DNA cross-link repair 1C##NM_022487|DCLRE1C|64421|DNA cross-link repair 1C##NM_001193424|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193426|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##BC029360|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193425|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193427|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK222565|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK225369|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK027067|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##BC007754|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_024670|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001039702|OLAH|55301|oleoyl-ACP hydrolase##NM_018324|OLAH|55301|oleoyl-ACP hydrolase##BC050372|OLAH|55301|oleoyl-ACP hydrolase##AK001844|OLAH|55301|oleoyl-ACP hydrolase##AK001968|OLAH|55301|oleoyl-ACP hydrolase##BC029526|ACBD7|414149|acyl-CoA binding domain containing 7##AK095538|ACBD7|414149|acyl-CoA binding domain containing 7##AK295169|ACBD7|414149|acyl-CoA binding domain containing 7##NM_001039844|ACBD7|414149|acyl-CoA binding domain containing 7##NM_001097590|RPP38|10557|ribonuclease P/MRP 38kDa subunit##NM_006414|RPP38|10557|ribonuclease P/MRP 38kDa subunit##NM_183005|RPP38|10557|ribonuclease P/MRP 38kDa subunit##AK223418|RPP38|10557|ribonuclease P/MRP 38kDa subunit	0.740157	CTCF.p2:15:0.740
chr10	46090339	46090517	reg1027461.p1	5.032	+	TSC_hg19_v1_chr10_-_46090318 BC066988 NM_001002265 NM_145021	-134	-	AK313340 BC025394 NM_001002266 AK307667	-59609	-	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	-220731	+	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	77786	-	NM_001169106 NM_001169107 NM_015262 TSC_hg19_v1_chr10_+_46222703 AK291430 AB011164 BC150611 AK303048 AK293929 BC053887	132279	+	BC171820 BC171833 AF411132 NM_133446	252485	-	BC066988|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002265|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_145021|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK313340|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC025394|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002266|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK307667|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001169106|FAM21C|253725|family with sequence similarity 21, member C##NM_001169107|FAM21C|253725|family with sequence similarity 21, member C##NM_015262|FAM21C|253725|family with sequence similarity 21, member C##AK291430|FAM21C|253725|family with sequence similarity 21, member C##AB011164|FAM21C|253725|family with sequence similarity 21, member C##BC150611|FAM21C|253725|family with sequence similarity 21, member C##AK303048|FAM21C|253725|family with sequence similarity 21, member C##AK293929|FAM21C|253725|family with sequence similarity 21, member C##BC053887|FAM21C|253725|family with sequence similarity 21, member C##BC171833|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##AF411132|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##NM_133446|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4	0.0	
chr10	75994448	75994555	reg1027640.p1	5.032	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-57914	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-57971	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-58019	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	591853	+	AY686755 NM_001003892 BC137321 BC137322	823804	-	AB027004 AB103375 NM_016364	864746	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr1	1624537	1624709	reg1017333.p2	5.032	+	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	-406	-	BC092507 TSC_hg19_v1_chr1_-_1624149 AK125619	-465	-	TSC_hg19_v1_chr1_-_1623947 CR936618 BC062371	-658	-	TSC_hg19_v1_chr1_-_1655767 AK303446 AF067518 AF067519 AF067520 AF067521 AF067522 AF067523 AK301495 AK304679 BC009375 AF067512 AF067513 AF067514 AF067515 AF067516 AF067517 AK303451 NM_033486 NM_033487 NM_033488 NM_033489 NM_033492 NM_033493 U04816 U04817 U04818 U04824 U07704 U07705 NM_024011 NM_033529	31153	-	AL049665 NM_001199787 NM_182838 TSC_hg19_v1_chr1_-_1677454 BC110653	52838	-	AK296722 NM_001198995	65457	-	AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B##BC092507|SLC35E2B|728661|solute carrier family 35, member E2B##AK125619|SLC35E2B|728661|solute carrier family 35, member E2B##CR936618|SLC35E2B|728661|solute carrier family 35, member E2B##BC062371|SLC35E2|9906|solute carrier family 35, member E2##AK303446|CDK11B|984|cyclin-dependent kinase 11B##AF067518|CDK11A|728642|cyclin-dependent kinase 11A##AF067519|CDK11A|728642|cyclin-dependent kinase 11A##AF067520|CDK11A|728642|cyclin-dependent kinase 11A##AF067521|CDK11A|728642|cyclin-dependent kinase 11A##AF067522|CDK11A|728642|cyclin-dependent kinase 11A##AF067523|CDK11A|728642|cyclin-dependent kinase 11A##AK301495|CDK11B|984|cyclin-dependent kinase 11B##AK304679|CDK11B|984|cyclin-dependent kinase 11B##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AF067512|CDK11B|984|cyclin-dependent kinase 11B##AF067513|CDK11B|984|cyclin-dependent kinase 11B##AF067514|CDK11B|984|cyclin-dependent kinase 11B##AF067515|CDK11B|984|cyclin-dependent kinase 11B##AF067516|CDK11B|984|cyclin-dependent kinase 11B##AF067517|CDK11B|984|cyclin-dependent kinase 11B##AK303451|CDK11B|984|cyclin-dependent kinase 11B##NM_033486|CDK11B|984|cyclin-dependent kinase 11B##NM_033487|CDK11B|984|cyclin-dependent kinase 11B##NM_033488|CDK11B|984|cyclin-dependent kinase 11B##NM_033489|CDK11B|984|cyclin-dependent kinase 11B##NM_033492|CDK11B|984|cyclin-dependent kinase 11B##NM_033493|CDK11B|984|cyclin-dependent kinase 11B##U04816|CDK11B|984|cyclin-dependent kinase 11B##U04817|CDK11B|984|cyclin-dependent kinase 11B##U04818|CDK11B|984|cyclin-dependent kinase 11B##U04824|CDK11B|984|cyclin-dependent kinase 11B##U07704|CDK11A|728642|cyclin-dependent kinase 11A##U07705|CDK11A|728642|cyclin-dependent kinase 11A##NM_024011|CDK11A|728642|cyclin-dependent kinase 11A##NM_033529|CDK11A|728642|cyclin-dependent kinase 11A##AL049665|SLC35E2|9906|solute carrier family 35, member E2##NM_001199787|SLC35E2|9906|solute carrier family 35, member E2##NM_182838|SLC35E2|9906|solute carrier family 35, member E2##BC110653|SLC35E2B|728661|solute carrier family 35, member E2B##AK296722|NADK|65220|NAD kinase##NM_001198995|NADK|65220|NAD kinase	0.0	
chr14	104387914	104388009	reg1023242.p2	5.032	+	AK310120 TSC_hg19_v1_chr14_-_104387867 AK309355 AK312099 AF054175 AK309499 DQ426862 NM_001127393 NM_004894	-82	-	BX161388 TSC_hg19_v1_chr14_-_104387847 BC047289 BC063419 BC000429 BC001944	-116	-	BC136527 AJ318887 TSC_hg19_v1_chr14_-_104313913 BC035446 NM_015316	-74109	-	TSC_hg19_v1_chr14_+_104394792 NM_153046	6822	+	AX781433 BX247999 NM_001080464 AX721044 BC035836 BC136637 AX781428 AX781429 AX781430 AX781431 AX781435	164100	+	NM_015656	217098	+	AK310120|C14orf2|9556|chromosome 14 open reading frame 2##AK309355|C14orf2|9556|chromosome 14 open reading frame 2##AK312099|C14orf2|9556|chromosome 14 open reading frame 2##AF054175|C14orf2|9556|chromosome 14 open reading frame 2##AK309499|C14orf2|9556|chromosome 14 open reading frame 2##DQ426862|C14orf2|9556|chromosome 14 open reading frame 2##NM_001127393|C14orf2|9556|chromosome 14 open reading frame 2##NM_004894|C14orf2|9556|chromosome 14 open reading frame 2##BX161388|C14orf2|9556|chromosome 14 open reading frame 2##BC047289|C14orf2|9556|chromosome 14 open reading frame 2##BC063419|C14orf2|9556|chromosome 14 open reading frame 2##BC000429|C14orf2|9556|chromosome 14 open reading frame 2##BC001944|C14orf2|9556|chromosome 14 open reading frame 2##BC136527|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##AJ318887|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##BC035446|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##NM_015316|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##NM_153046|TDRD9|122402|tudor domain containing 9##AX781433|ASPG|374569|asparaginase homolog (S. cerevisiae)##BX247999|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_001080464|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC035836|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC136637|ASPG|374569|asparaginase homolog (S. cerevisiae)##AX781435|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_015656|KIF26A|26153|kinesin family member 26A	0.042547	
chr17	32408448	32408552	reg1027379.p1	5.032	+	AL834182 NM_183377	-788495	-	AF216311 NM_173847 BC100886 BC100887	-1089598	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-1153297	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	75187	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	173831	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	188773	+	AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7	1.080658	CTCF.p2:-4:0.989
chr1	82226300	82226413	reg1024015.p1	5.032	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	-454429	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-2753929	-	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-3110858	+	AF104266 AF104938 AF104939 NM_012302	39725	+	AK097722 TSC_hg19_v1_chr1_-_84326308	2099912	-	TSC_hg19_v1_chr1_-_84326677 BC036594	2100320	-	BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.909555	CTCF.p2:25:0.910
chr19	6460582	6460762	reg1029108.p2	5.032	+	AJ619962 AJ512835 AJ619988 AY750170 TSC_hg19_v1_chr19_-_6459804 BC001656 NM_024103	-867	-	TSC_hg19_v1_chr19_-_6459616 AK294514 CU674816	-1051	-	AK027562 TSC_hg19_v1_chr19_-_6442095	-18622	-	NM_139161 NM_174881 AK292956 AF503290 AY358684 BC018409 AK000653	3612	+	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	21111	-	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	41645	-	AJ619962|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##AJ512835|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##AJ619988|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##AY750170|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##BC001656|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##NM_024103|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##AK294514|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##AK027562|SLC25A23|79085|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23##NM_139161|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_174881|CRB3|92359|crumbs homolog 3 (Drosophila)##AK292956|CRB3|92359|crumbs homolog 3 (Drosophila)##AF503290|CRB3|92359|crumbs homolog 3 (Drosophila)##AY358684|CRB3|92359|crumbs homolog 3 (Drosophila)##BC018409|CRB3|92359|crumbs homolog 3 (Drosophila)##AK000653|CRB3|92359|crumbs homolog 3 (Drosophila)##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa	0.052497	
chr20	21509655	21509752	reg1028628.p2	5.032	+	NM_002509	-15040	-	NM_033176 TSC_hg19_v1_chr20_-_21378181	-131589	-	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	-225728	+	TSC_hg19_v1_chr20_+_21686296 NM_006192	176591	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	176830	+	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	1055213	-	NM_002509|NKX2-2|4821|NK2 homeobox 2##NM_033176|NKX2-4|644524|NK2 homeobox 4##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2##NM_006192|PAX1|5075|paired box 1##BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2	0.907353	CTCF.p2:2:0.907
chr2	240318952	240319049	reg1026806.p1	5.032	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	-562237	+	TSC_hg19_v1_chr2_+_239335693 AF156777	-983311	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	-983394	+	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	3648	-	TSC_hg19_v1_chr2_-_240322695 BC039904	3698	-	TSC_hg19_v1_chr2_-_240323341 AK308791	4348	-	BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)##AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AK308791|HDAC4|9759|histone deacetylase 4	0.0	
chr22	45793801	45793912	reg1032593.p1	5.032	+	TSC_hg19_v1_chr22_+_45705966 BC013696	-87860	+	TSC_hg19_v1_chr22_+_45705838 NM_017911 AK000642	-88042	+	TSC_hg19_v1_chr22_+_45704858 AK125027 NM_001104595	-88906	+	TSC_hg19_v1_chr22_-_45809502 BC126208 AJ504806 NM_148674	15628	-	TSC_hg19_v1_chr22_+_45809579 AK098586 NM_015653 AK225722	15713	+	TSC_hg19_v1_chr22_+_45809599 BC003024 BC009904 AL442116	15772	+	BC013696|FAM118A|55007|family with sequence similarity 118, member A##NM_017911|FAM118A|55007|family with sequence similarity 118, member A##AK000642|FAM118A|55007|family with sequence similarity 118, member A##AK125027|FAM118A|55007|family with sequence similarity 118, member A##NM_001104595|FAM118A|55007|family with sequence similarity 118, member A##BC126208|SMC1B|27127|structural maintenance of chromosomes 1B##AJ504806|SMC1B|27127|structural maintenance of chromosomes 1B##NM_148674|SMC1B|27127|structural maintenance of chromosomes 1B##AK098586|RIBC2|26150|RIB43A domain with coiled-coils 2##NM_015653|RIBC2|26150|RIB43A domain with coiled-coils 2##AK225722|RIBC2|26150|RIB43A domain with coiled-coils 2##BC003024|RIBC2|26150|RIB43A domain with coiled-coils 2##BC009904|RIBC2|26150|RIB43A domain with coiled-coils 2##AL442116|RIBC2|26150|RIB43A domain with coiled-coils 2	0.998966	CTCF.p2:18:0.999
chr5	110867557	110867649	reg1023134.p2	5.032	+	BC042956 TSC_hg19_v1_chr5_-_110848300	-19309	-	AK054566 NM_139164 TSC_hg19_v1_chr5_-_110848234 AK290312 AK310848 BC019632 AK125317 AK308851 AK315863 AK315869	-19401	-	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	-307654	+	NM_001142483	224344	-	TSC_hg19_v1_chr5_-_111092886 BC019068 BC001783 AK309667 AK310585 BX649051 BC072013 BC072443	225283	-	AK315617 TSC_hg19_v1_chr5_-_111092922 NM_004772 U30521	225333	-	BC042956|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK054566|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_139164|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK290312|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK310848|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC019632|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK125317|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK308851|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315863|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315869|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13##BC019068|C5orf13|9315|chromosome 5 open reading frame 13##BX649051|C5orf13|9315|chromosome 5 open reading frame 13##BC072013|C5orf13|9315|chromosome 5 open reading frame 13##BC072443|C5orf13|9315|chromosome 5 open reading frame 13##AK315617|C5orf13|9315|chromosome 5 open reading frame 13##NM_004772|C5orf13|9315|chromosome 5 open reading frame 13##U30521|C5orf13|9315|chromosome 5 open reading frame 13	0.952823	CTCF.p2:9:0.953
chr6_qbl_hap6	1991680	1991794	reg1024838.p1	5.032	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.996692	CTCF.p2:6:0.997
chr12	111043510	111043690	reg1028696.p1	5.031	+	AK124744 TSC_hg19_v1_chr12_-_111021124	-22474	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	-22530	-	TSC_hg19_v1_chr12_-_111020755 AY357944	-22807	-	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	8325	+	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	83358	-	AK293543 NM_001040107	83999	-	AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AY357944|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1	0.0	
chr14	74294000	74294109	reg1028333.p1	5.031	+	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	-40135	-	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	-67089	-	BC015668 TSC_hg19_v1_chr14_-_74226640	-67416	-	TSC_hg19_v1_chr14_+_74318554 NM_001146154 NM_001146155 AY346133 AY424308 AK311280 NM_152444 BX641118 BC059364 AK309188 AK096410 BC034973	24535	+	NM_001242924 NM_001242926 NM_001242927 NM_001242928 NM_021188 AK299138	59264	+	BC050683 AK298520 TSC_hg19_v1_chr14_+_74353561 AK315206 AK223261 AK293350 AK298307 AK303834 AK304609 AK310031 AK301382 AK309957 BC000330 BC004357 U90919	59492	+	NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43##AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##BC015668|C14orf43|91748|chromosome 14 open reading frame 43##NM_001146154|PTGR2|145482|prostaglandin reductase 2##NM_001146155|PTGR2|145482|prostaglandin reductase 2##AY346133|PTGR2|145482|prostaglandin reductase 2##AY424308|PTGR2|145482|prostaglandin reductase 2##AK311280|PTGR2|145482|prostaglandin reductase 2##NM_152444|PTGR2|145482|prostaglandin reductase 2##BX641118|PTGR2|145482|prostaglandin reductase 2##BC059364|PTGR2|145482|prostaglandin reductase 2##AK309188|PTGR2|145482|prostaglandin reductase 2##AK096410|PTGR2|145482|prostaglandin reductase 2##NM_001242924|ZNF410|57862|zinc finger protein 410##NM_001242926|ZNF410|57862|zinc finger protein 410##NM_001242927|ZNF410|57862|zinc finger protein 410##NM_001242928|ZNF410|57862|zinc finger protein 410##NM_021188|ZNF410|57862|zinc finger protein 410##AK299138|ZNF410|57862|zinc finger protein 410##BC050683|ZNF410|57862|zinc finger protein 410##AK298520|ZNF410|57862|zinc finger protein 410##AK315206|ZNF410|57862|zinc finger protein 410##AK223261|ZNF410|57862|zinc finger protein 410##AK293350|ZNF410|57862|zinc finger protein 410##AK298307|ZNF410|57862|zinc finger protein 410##AK303834|ZNF410|57862|zinc finger protein 410##AK304609|ZNF410|57862|zinc finger protein 410##AK310031|ZNF410|57862|zinc finger protein 410##AK301382|ZNF410|57862|zinc finger protein 410##AK309957|ZNF410|57862|zinc finger protein 410##BC000330|ZNF410|57862|zinc finger protein 410##BC004357|ZNF410|57862|zinc finger protein 410##U90919|ZNF410|57862|zinc finger protein 410	0.0	
chr16	15871813	15871887	reg1024547.p1	5.031	+	TSC_hg19_v1_chr16_-_15835382 D10667	-36403	-	BX641087 TSC_hg19_v1_chr16_-_15833973	-37895	-	NM_017668 BC001421 TSC_hg19_v1_chr16_+_15744101 AK000108 AK025815	-127743	+	BC101677 BC104906 BC143364 AB020673 AY520816 AY520817 TSC_hg19_v1_chr16_-_15950886 AK308389 BC031040 EU489063 NM_001040113 NM_001040114 NM_002474 NM_022844	79019	-	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	110603	-	AL832498 TSC_hg19_v1_chr16_-_15982471	110635	-	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle##BX641087|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_017668|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC001421|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK000108|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK025815|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC101677|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC104906|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC143364|MYH11|4629|myosin, heavy chain 11, smooth muscle##AB020673|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520816|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520817|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK308389|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC031040|MYH11|4629|myosin, heavy chain 11, smooth muscle##EU489063|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040113|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040114|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_002474|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_022844|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##AL832498|FOPNL|123811|FGFR1OP N-terminal like	0.354192	CTCF.p2:-11:0.354
chr16	17120749	17120845	reg1026075.p1	5.031	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-794267	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-794309	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-794315	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	444008	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1452594	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1677299	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr20	14035912	14036037	reg1027168.p2	5.031	+	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-59638	+	AK131348 TSC_hg19_v1_chr20_+_13976161 NM_080676	-59868	+	BC035741 AK302170 NM_025229	-64716	-	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	282282	-	BC018687 NM_001033087	1141529	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	2518039	-	BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK131348|MACROD2|140733|MACRO domain containing 2##NM_080676|MACROD2|140733|MACRO domain containing 2##BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B	0.992685	CTCF.p2:2:0.993
chr7	131231537	131231683	reg1028092.p2	5.031	+	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-218971	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	-219004	+	AK294384 NM_001145354	-436756	+	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	9753	-	TSC_hg19_v1_chr7_-_131833385 AL834504	601785	-	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	961310	-	BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##AL834504|PLXNA4|91584|plexin A4##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4	0.875479	CTCF.p2:-54:0.862
chr8	137242309	137242478	reg1027491.p1	5.031	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-772192	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-772735	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1517119	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2266713	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2683851	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3472889	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.0	
chr9	101469569	101469690	reg1026098.p2	5.031	+	TSC_hg19_v1_chr9_-_101018013 NM_018421	-451625	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	-451908	-	TSC_hg19_v1_chr9_-_100954922 AK292788 BC011690 AB209809 NM_052820	-514696	-	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	1556	-	CR749467 TSC_hg19_v1_chr9_-_101558801 NM_173551	89022	-	TSC_hg19_v1_chr9_+_101569953 AB527376 AB040673 AB078146 AJ132365 NM_024642	100361	+	NM_018421|TBC1D2|55357|TBC1 domain family, member 2##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##AK292788|CORO2A|7464|coronin, actin binding protein, 2A##BC011690|CORO2A|7464|coronin, actin binding protein, 2A##AB209809|CORO2A|7464|coronin, actin binding protein, 2A##NM_052820|CORO2A|7464|coronin, actin binding protein, 2A##DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##CR749467|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##NM_173551|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##AB040673|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AB078146|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AJ132365|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##NM_024642|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)	0.993116	CTCF.p2:20:0.993
chrX	100872320	100872457	reg1028924.p1	5.031	+	TSC_hg19_v1_chrX_+_100805532 AB039670 NM_016608 CR749609 AK222578 AK074785 BC002691 AF248963	-66887	+	TSC_hg19_v1_chrX_+_100663231 U01923	-209133	+	AK298133 TSC_hg19_v1_chrX_+_100663213	-209169	+	TSC_hg19_v1_chrX_-_100872931 BC007677 NM_001009584 NM_001184768 NM_019007	570	-	TSC_hg19_v1_chrX_+_100878175 AK291225 NM_016607 NM_177947 BX647802 AF208859 AK222655 AB039669 BC005194 CR933656	5753	+	NM_177948	5962	+	AB039670|ARMCX1|51309|armadillo repeat containing, X-linked 1##NM_016608|ARMCX1|51309|armadillo repeat containing, X-linked 1##CR749609|ARMCX1|51309|armadillo repeat containing, X-linked 1##AK222578|ARMCX1|51309|armadillo repeat containing, X-linked 1##AK074785|ARMCX1|51309|armadillo repeat containing, X-linked 1##BC002691|ARMCX1|51309|armadillo repeat containing, X-linked 1##AF248963|ARMCX1|51309|armadillo repeat containing, X-linked 1##U01923|HNRNPH2|3188|heterogeneous nuclear ribonucleoprotein H2 (H')##AK298133|HNRNPH2|3188|heterogeneous nuclear ribonucleoprotein H2 (H')##BC007677|ARMCX6|54470|armadillo repeat containing, X-linked 6##NM_001009584|ARMCX6|54470|armadillo repeat containing, X-linked 6##NM_001184768|ARMCX6|54470|armadillo repeat containing, X-linked 6##NM_019007|ARMCX6|54470|armadillo repeat containing, X-linked 6##AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3##BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3##AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3##AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3##BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3##CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_177948|ARMCX3|51566|armadillo repeat containing, X-linked 3	0.455452	CTCF.p2:11:0.455
chr11	116147176	116147356	reg1002648.p1	5.030	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-772086	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-1058618	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1598018	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	496432	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	511449	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	511472	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.945223	CTCF.p2:-24:0.945
chr4	83723179	83723315	reg1031628.p1	5.030	+	TSC_hg19_v1_chr4_-_83719926 BC004936 BC137429 BC137432 AF389338 AK024685 NM_001037582 NM_024906	-3258	-	AK301116 BC147019 BC147027 NM_001080506 AK297512	-240133	-	TSC_hg19_v1_chr4_+_83351969 AB528563 CR457141	-371278	+	TSC_hg19_v1_chr4_-_83812296 BC084583 AB018358 AB018359 BC031292 AK225934 BC143489 BC117221 BC143491 BC143492	89038	-	AK002161 CR933696 TSC_hg19_v1_chr4_-_83812319	89065	-	TSC_hg19_v1_chr4_-_83812330 AK295810	89081	-	BC004936|SCD5|79966|stearoyl-CoA desaturase 5##BC137429|SCD5|79966|stearoyl-CoA desaturase 5##BC137432|SCD5|79966|stearoyl-CoA desaturase 5##AF389338|SCD5|79966|stearoyl-CoA desaturase 5##AK024685|SCD5|79966|stearoyl-CoA desaturase 5##NM_001037582|SCD5|79966|stearoyl-CoA desaturase 5##NM_024906|SCD5|79966|stearoyl-CoA desaturase 5##AK301116|TMEM150C|441027|transmembrane protein 150C##BC147019|TMEM150C|441027|transmembrane protein 150C##BC147027|TMEM150C|441027|transmembrane protein 150C##NM_001080506|TMEM150C|441027|transmembrane protein 150C##AK297512|TMEM150C|441027|transmembrane protein 150C##CR457141|ENOPH1|58478|enolase-phosphatase 1##BC084583|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AB018358|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AB018359|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC031292|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK225934|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143489|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC117221|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143491|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143492|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK002161|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##CR933696|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK295810|SEC31A|22872|SEC31 homolog A (S. cerevisiae)	0.853771	CTCF.p2:26:0.854
chr8	58986930	58987050	reg1027501.p2	5.030	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-79833	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1080564	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1080588	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	336895	+	X56088 M93133 BC101777 BC112184 NM_000780	425717	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	478762	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.085299	
chr20	35012603	35012726	reg1029194.p1	5.029	+	NM_014902	-17221	+	TSC_hg19_v1_chr20_+_34894262 AB023181	-118409	+	TSC_hg19_v1_chr20_+_34824402 BC001751 BC019311 NM_015511	-188241	+	TSC_hg19_v1_chr20_+_35089870 NM_001042486 AK001681	77205	+	NM_183006 BC153874 TSC_hg19_v1_chr20_+_35090197 BC108706	77511	+	TSC_hg19_v1_chr20_+_35169892 NM_006097 NM_181526	157222	+	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##AB023181|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC001751|C20orf4|25980|chromosome 20 open reading frame 4##BC019311|C20orf4|25980|chromosome 20 open reading frame 4##NM_015511|C20orf4|25980|chromosome 20 open reading frame 4##NM_001042486|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##AK001681|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_183006|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC153874|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC108706|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_006097|MYL9|10398|myosin, light chain 9, regulatory##NM_181526|MYL9|10398|myosin, light chain 9, regulatory	0.01426	
chr3	52833231	52833321	reg1026172.p1	5.029	+	NM_002217 TSC_hg19_v1_chr3_+_52828811 X67055 AK222757 AK298450 BC107604 BC107605 BC107814	-4477	+	AK303156 NM_001166435 AK303110 NM_001166436	-19338	+	X16260 NM_001166434 AK298455	-20796	+	AK298407 AK298412 AK298429 D38595 BC136392 BC136393 TSC_hg19_v1_chr3_-_52864689 AK303769 NM_001166449 NM_002218	31425	-	NM_205853	35958	-	TSC_hg19_v1_chr3_-_52931547 AY726591 BC047015	98173	-	NM_002217|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##X67055|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##AK222757|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##AK298450|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##BC107604|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##BC107605|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##BC107814|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##AK303156|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##NM_001166435|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##AK303110|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##NM_001166436|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##X16260|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##NM_001166434|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##AK298455|ITIH1|3697|inter-alpha-trypsin inhibitor heavy chain 1##AK298407|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##AK298412|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##AK298429|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##D38595|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##BC136392|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##BC136393|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##AK303769|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##NM_001166449|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##NM_002218|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##NM_205853|MUSTN1|389125|musculoskeletal, embryonic nuclear protein 1##AY726591|TMEM110|375346|transmembrane protein 110##BC047015|TMEM110|375346|transmembrane protein 110	0.56094	CTCF.p2:-9:0.561
chr9	139333537	139333653	reg1030856.p1	5.029	+	TSC_hg19_v1_chr9_+_139305109 AK299304 AK308104 AK307206 D21064 D50913 AK296617 BC111399 BC033103 NM_015160 BC022949	-28486	+	TSC_hg19_v1_chr9_+_139305083 BC132724 BC136599	-28515	+	TSC_hg19_v1_chr9_-_139305058 NM_001039707 NM_001039708 NM_006643	-28540	-	TSC_hg19_v1_chr9_-_139334261 BC028032 NM_019892	663	-	TSC_hg19_v1_chr9_-_139334267 AL832846	675	-	BC110356 TSC_hg19_v1_chr9_-_139334317	716	-	AK299304|PMPCA|23203|peptidase (mitochondrial processing) alpha##AK308104|PMPCA|23203|peptidase (mitochondrial processing) alpha##AK307206|PMPCA|23203|peptidase (mitochondrial processing) alpha##D21064|PMPCA|23203|peptidase (mitochondrial processing) alpha##D50913|PMPCA|23203|peptidase (mitochondrial processing) alpha##AK296617|PMPCA|23203|peptidase (mitochondrial processing) alpha##BC111399|PMPCA|23203|peptidase (mitochondrial processing) alpha##BC033103|PMPCA|23203|peptidase (mitochondrial processing) alpha##NM_015160|PMPCA|23203|peptidase (mitochondrial processing) alpha##BC022949|PMPCA|23203|peptidase (mitochondrial processing) alpha##BC132724|PMPCA|23203|peptidase (mitochondrial processing) alpha##BC136599|PMPCA|23203|peptidase (mitochondrial processing) alpha##NM_001039707|SDCCAG3|10807|serologically defined colon cancer antigen 3##NM_001039708|SDCCAG3|10807|serologically defined colon cancer antigen 3##NM_006643|SDCCAG3|10807|serologically defined colon cancer antigen 3##BC028032|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa##NM_019892|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa##AL832846|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa##BC110356|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa	0.0	
chr12	97295985	97296086	reg1027325.p1	5.028	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-501718	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	-502052	-	TSC_hg19_v1_chr12_+_96588254 BC017371	-707768	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	4996	+	BC027605 NM_001135175	5208	+	TSC_hg19_v1_chr12_-_98897622 AK126817	1601592	-	AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK126817|LOC643770|643770|uncharacterized LOC643770	0.017229	
chr20	25119885	25120023	reg1029509.p2	5.028	+	BC126228 BC136497 AF251033 AF251034 DQ854807 DQ854808 DQ854809 DQ854810 DQ854811 DQ854812 NM_014588 NM_199425	-57193	-	AL832939 BC114612 AK314440 TSC_hg19_v1_chr20_-_25038780 BC044588 BC055008 AK127566 BC039261 NM_001252675 NM_001252677 NM_032501	-81275	-	AK125058 AK296306 NM_001252676	-106630	-	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	56416	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	56526	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	108804	+	BC126228|VSX1|30813|visual system homeobox 1##BC136497|VSX1|30813|visual system homeobox 1##AF251033|VSX1|30813|visual system homeobox 1##AF251034|VSX1|30813|visual system homeobox 1##DQ854807|VSX1|30813|visual system homeobox 1##DQ854808|VSX1|30813|visual system homeobox 1##DQ854809|VSX1|30813|visual system homeobox 1##DQ854810|VSX1|30813|visual system homeobox 1##DQ854811|VSX1|30813|visual system homeobox 1##DQ854812|VSX1|30813|visual system homeobox 1##NM_014588|VSX1|30813|visual system homeobox 1##NM_199425|VSX1|30813|visual system homeobox 1##AL832939|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC114612|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK314440|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC044588|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC055008|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK127566|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC039261|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252675|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252677|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_032501|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK125058|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK296306|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252676|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain	1.724187	CTCF.p2:-24:0.777	CTCF.p2:41:0.947
chr21	32996116	32996220	reg1025735.p1	5.028	+	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	-64810	-	AB096964 NM_001099219	-585374	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	-742310	-	TSC_hg19_v1_chr21_+_33032005 NM_000454 AK312116 BC001034 X02317 EF151142 AB464254 AY049787 AY450286 BT006676 CR450355 CR541742 CU674512 EF143990	35839	+	AB032998 AK025748 AL117417 TSC_hg19_v1_chr21_-_33074136	77950	-	AL834304 BC052286 BC064990 TSC_hg19_v1_chr21_-_33104271 AK057840 AK308406	108104	-	NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##NM_000454|SOD1|6647|superoxide dismutase 1, soluble##AK312116|SOD1|6647|superoxide dismutase 1, soluble##BC001034|SOD1|6647|superoxide dismutase 1, soluble##X02317|SOD1|6647|superoxide dismutase 1, soluble##EF151142|SOD1|6647|superoxide dismutase 1, soluble##AY049787|SOD1|6647|superoxide dismutase 1, soluble##AY450286|SOD1|6647|superoxide dismutase 1, soluble##BT006676|SOD1|6647|superoxide dismutase 1, soluble##CR450355|SOD1|6647|superoxide dismutase 1, soluble##CR541742|SOD1|6647|superoxide dismutase 1, soluble##EF143990|SOD1|6647|superoxide dismutase 1, soluble##AB032998|SCAF4|57466|SR-related CTD-associated factor 4##AK025748|SCAF4|57466|SR-related CTD-associated factor 4##AL117417|SCAF4|57466|SR-related CTD-associated factor 4##AL834304|SCAF4|57466|SR-related CTD-associated factor 4##BC052286|SCAF4|57466|SR-related CTD-associated factor 4##BC064990|SCAF4|57466|SR-related CTD-associated factor 4##AK057840|SCAF4|57466|SR-related CTD-associated factor 4##AK308406|SCAF4|57466|SR-related CTD-associated factor 4	0.154368	
chr6	108819218	108819355	reg1033946.p1	5.028	+	TSC_hg19_v1_chr6_+_108616194 AF520418 BC018445 NM_145315	-203147	+	TSC_hg19_v1_chr6_-_108582316 NM_003795 NM_152827	-236901	-	TSC_hg19_v1_chr6_-_108582245 BC015179 BC014580 AK289476	-237048	-	TSC_hg19_v1_chr6_+_108881027 NM_201559 BC020227 BC021224	61737	+	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	62789	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	62971	+	AF520418|LACE1|246269|lactation elevated 1##BC018445|LACE1|246269|lactation elevated 1##NM_145315|LACE1|246269|lactation elevated 1##NM_003795|SNX3|8724|sorting nexin 3##NM_152827|SNX3|8724|sorting nexin 3##BC015179|SNX3|8724|sorting nexin 3##BC014580|SNX3|8724|sorting nexin 3##AK289476|SNX3|8724|sorting nexin 3##NM_201559|FOXO3|2309|forkhead box O3##BC020227|FOXO3|2309|forkhead box O3##BC021224|FOXO3|2309|forkhead box O3##BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3	0.0	
chr10	80962412	80962504	reg1028515.p1	5.027	+	TSC_hg19_v1_chr10_+_80899458 AK025812	-62974	+	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	-133670	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-1168827	+	TSC_hg19_v1_chr10_+_81003207 AB033050	40672	+	AK299728 TSC_hg19_v1_chr10_+_81065901	103430	+	TSC_hg19_v1_chr10_+_81070578 BC025342 BC068072	108186	+	AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK299728|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC025342|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC068072|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.489269	CTCF.p2:0:0.489
chr19	38396816	38396997	reg1028161.p1	5.027	+	TSC_hg19_v1_chr19_+_38308124 AK092337	-88767	+	TSC_hg19_v1_chr19_+_38307973 AK309685	-88897	+	BC064962 AK074539 NM_001172689 NM_001172690 NM_001172691 NM_001172692 NM_152360	-126692	-	AK302913 AY026504 AK128826 NM_031951	368	-	TSC_hg19_v1_chr19_+_38397847 NM_015073	951	+	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	1006	+	AK092337|LOC644554|644554|uncharacterized LOC644554##AK309685|LOC644554|644554|uncharacterized LOC644554##BC064962|ZNF573|126231|zinc finger protein 573##AK074539|ZNF573|126231|zinc finger protein 573##NM_001172689|ZNF573|126231|zinc finger protein 573##NM_001172690|ZNF573|126231|zinc finger protein 573##NM_001172691|ZNF573|126231|zinc finger protein 573##NM_001172692|ZNF573|126231|zinc finger protein 573##NM_152360|ZNF573|126231|zinc finger protein 573##AK302913|WDR87|83889|WD repeat domain 87##AY026504|WDR87|83889|WD repeat domain 87##AK128826|WDR87|83889|WD repeat domain 87##NM_031951|WDR87|83889|WD repeat domain 87##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3	0.0	
chr4	104836490	104836637	reg1030823.p1	5.027	+	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-195663	-	AB527246 AB209996 TSC_hg19_v1_chr4_-_104119535 AK290362 NM_001813 Z15005	-717043	-	AK128463 TSC_hg19_v1_chr4_-_104020987 AF164790 AK023323 AK290160 AK291335 AK300626 BC037277 BC095414 AY358841 BC001953 NM_020139	-815563	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	575919	-	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	579490	-	BX640738 NM_017628	1230468	+	BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##AB209996|CENPE|1062|centromere protein E, 312kDa##AK290362|CENPE|1062|centromere protein E, 312kDa##NM_001813|CENPE|1062|centromere protein E, 312kDa##Z15005|CENPE|1062|centromere protein E, 312kDa##AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##AK127778|CXXC4|80319|CXXC finger protein 4##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2	0.978952	CTCF.p2:13:0.979
chr8	38625971	38626102	reg1025317.p1	5.027	+	AY072874 AY072875 TSC_hg19_v1_chr8_+_38614814 AK308849	-11250	+	BX647696 NM_001146216	-40333	+	BC137511 BC137512 BC139744 AK125570 NM_207412	-239860	-	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	18686	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	18732	+	AK098787 NM_021623 TSC_hg19_v1_chr8_+_38758793 AK296068 AK291842 AF286164	132775	+	AY072874|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072875|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK308849|TACC1|6867|transforming, acidic coiled-coil containing protein 1##BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1##BC137511|C8orf86|389649|chromosome 8 open reading frame 86##BC137512|C8orf86|389649|chromosome 8 open reading frame 86##BC139744|C8orf86|389649|chromosome 8 open reading frame 86##AK125570|C8orf86|389649|chromosome 8 open reading frame 86##NM_207412|C8orf86|389649|chromosome 8 open reading frame 86##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	0.999929	CTCF.p2:-42:1.000
chr8	52365122	52365303	reg1024861.p1	5.027	+	AJ003030 NM_018967	-1540616	+	NM_001007176 BC017981 AJ276240	-2380303	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-2531302	-	EU170240 AY877349 NM_144651	356741	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	446390	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	446515	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.0	
chr4	13543750	13543867	reg1028598.p1	5.026	+	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	-57833	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	-57857	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-2113276	-	AB463932 AF009801 EU446467 BC111966 NM_001189	2267	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	5606	-	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	85509	-	NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like	0.976153	CTCF.p2:16:0.976
chr4	157966825	157966927	reg1028843.p2	5.026	+	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	-74317	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	-74398	-	AB590688 BC051876 BC094746 AF260738 AK300480 AF244813 AK313817 BC041783 BC065490 TSC_hg19_v1_chr4_-_157892334 AM922296 AB033831	-74659	-	TSC_hg19_v1_chr4_+_157997314 NM_000824 NM_001166061 AF094754 BC032635 AK290617 BC022502 U33267 NM_001166060 AF094755	30558	+	NM_000826 NM_001083619 NM_001083620 BC028736 AL832605 TSC_hg19_v1_chr4_+_158141879 AB209567 BC010574 L20814	175008	+	AK096792 AK129723 TSC_hg19_v1_chr4_+_159091940	1125057	+	AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C##BC051876|PDGFC|56034|platelet derived growth factor C##BC094746|PDGFC|56034|platelet derived growth factor C##AF260738|PDGFC|56034|platelet derived growth factor C##AK300480|PDGFC|56034|platelet derived growth factor C##AF244813|PDGFC|56034|platelet derived growth factor C##AK313817|PDGFC|56034|platelet derived growth factor C##BC041783|PDGFC|56034|platelet derived growth factor C##AM922296|PDGFC|56034|platelet derived growth factor C##AB033831|PDGFC|56034|platelet derived growth factor C##NM_000824|GLRB|2743|glycine receptor, beta##NM_001166061|GLRB|2743|glycine receptor, beta##AF094754|GLRB|2743|glycine receptor, beta##BC032635|GLRB|2743|glycine receptor, beta##AK290617|GLRB|2743|glycine receptor, beta##BC022502|GLRB|2743|glycine receptor, beta##U33267|GLRB|2743|glycine receptor, beta##NM_001166060|GLRB|2743|glycine receptor, beta##AF094755|GLRB|2743|glycine receptor, beta##NM_000826|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##NM_001083619|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##NM_001083620|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##BC028736|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AL832605|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AB209567|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##BC010574|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##L20814|GRIA2|2891|glutamate receptor, ionotropic, AMPA 2##AK096792|LOC285505|285505|uncharacterized LOC285505##AK129723|LOC285505|285505|uncharacterized LOC285505	0.0	
chrX	119173222	119173361	reg1026716.p1	5.026	+	CU677277 CU689374 BC032442 BC015354 BC016783 BC000940 BC012770 TSC_hg19_v1_chrX_-_119077709 BC018968 BC071686 AL832118 AK026279 AY388958 NM_024528	-95618	-	BC066357 NM_001008534 NM_001008535 NM_178813	-143424	+	TSC_hg19_v1_chrX_+_119005794 BC000266 U54993 X81900 AB451304 AB451435 CR456889	-167460	+	AB464156 DQ890992 DQ894169 BC021719 AK058125 AL590524 AF317219 AL590526 NM_001099685 NM_032498	38320	-	AB464155 EU446851 BC103857 BC103858 BC069324 BC069529 AY099086 NM_139282	76519	-	AL590526 NM_001099685 NM_032498 AF317219 AL590524 AK058125 BC021719 AB464156 DQ890992 DQ894169	119270	+	BC032442|NKAP|79576|NFKB activating protein##BC015354|NKAP|79576|NFKB activating protein##BC016783|NKAP|79576|NFKB activating protein##BC000940|NKAP|79576|NFKB activating protein##BC012770|NKAP|79576|NFKB activating protein##BC018968|NKAP|79576|NFKB activating protein##BC071686|NKAP|79576|NFKB activating protein##AL832118|NKAP|79576|NFKB activating protein##AK026279|NKAP|79576|NFKB activating protein##AY388958|NKAP|79576|NFKB activating protein##NM_024528|NKAP|79576|NFKB activating protein##BC066357|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_001008534|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_001008535|AKAP14|158798|A kinase (PRKA) anchor protein 14##NM_178813|AKAP14|158798|A kinase (PRKA) anchor protein 14##BC000266|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##U54993|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##X81900|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##AB451304|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##AB451435|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##CR456889|NDUFA1|4694|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1, 7.5kDa##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##EU446851|RHOXF1|158800|Rhox homeobox family, member 1##BC103857|RHOXF1|158800|Rhox homeobox family, member 1##BC103858|RHOXF1|158800|Rhox homeobox family, member 1##BC069324|RHOXF1|158800|Rhox homeobox family, member 1##BC069529|RHOXF1|158800|Rhox homeobox family, member 1##AY099086|RHOXF1|158800|Rhox homeobox family, member 1##NM_139282|RHOXF1|158800|Rhox homeobox family, member 1##AL590526|RHOXF2|84528|Rhox homeobox family, member 2##NM_001099685|RHOXF2B|727940|Rhox homeobox family, member 2B##NM_032498|RHOXF2|84528|Rhox homeobox family, member 2##AF317219|RHOXF2|84528|Rhox homeobox family, member 2##AL590524|RHOXF2|84528|Rhox homeobox family, member 2##AK058125|RHOXF2|84528|Rhox homeobox family, member 2##BC021719|RHOXF2|84528|Rhox homeobox family, member 2##DQ890992|RHOXF2|84528|Rhox homeobox family, member 2##DQ894169|RHOXF2|84528|Rhox homeobox family, member 2	0.98918	CTCF.p2:-33:0.989
chr11	125931642	125931814	reg1028394.p2	5.025	+	NM_013264 BC031098 BC050360 AK312772 TSC_hg19_v1_chr11_+_125774406 AK295121 BC035388	-157386	+	TSC_hg19_v1_chr11_-_125773094 AK055702 BC004822 AK314251 NM_031307	-158617	-	TSC_hg19_v1_chr11_+_125757594 BC015047	-174115	+	BC098583 NM_001243597 NM_016952	1458	-	CU680792 TSC_hg19_v1_chr11_-_126081542 AK027400 AK308059 AK225320 BC014131 NM_001144827 NM_032795	149831	-	NM_024556 TSC_hg19_v1_chr11_+_126081676 AK315615 AK024756 AK225081 BC001647	149934	+	NM_013264|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##BC031098|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##BC050360|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##AK312772|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##AK295121|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##BC035388|DDX25|29118|DEAD (Asp-Glu-Ala-Asp) box polypeptide 25##AK055702|PUS3|83480|pseudouridylate synthase 3##BC004822|PUS3|83480|pseudouridylate synthase 3##AK314251|PUS3|83480|pseudouridylate synthase 3##NM_031307|PUS3|83480|pseudouridylate synthase 3##BC015047|HYLS1|219844|hydrolethalus syndrome 1##BC098583|CDON|50937|Cdon homolog (mouse)##NM_001243597|CDON|50937|Cdon homolog (mouse)##NM_016952|CDON|50937|Cdon homolog (mouse)##AK027400|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##AK308059|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##AK225320|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##BC014131|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##NM_001144827|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##NM_032795|RPUSD4|84881|RNA pseudouridylate synthase domain containing 4##NM_024556|FAM118B|79607|family with sequence similarity 118, member B##AK315615|FAM118B|79607|family with sequence similarity 118, member B##AK024756|FAM118B|79607|family with sequence similarity 118, member B##AK225081|FAM118B|79607|family with sequence similarity 118, member B##BC001647|FAM118B|79607|family with sequence similarity 118, member B	0.011263	
chr1	12147990	12148170	reg1027154.p2	5.025	+	M83554 NM_001243 BC136400 BC171762 S75768	-24536	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-68510	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-68546	+	D86042 BC063482 NM_152942 BC073839 BC141804	37936	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	78981	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	79031	+	M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr22	26756475	26756611	reg1024872.p1	5.025	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	-190880	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	-191046	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	-191106	+	TSC_hg19_v1_chr22_+_26825246 NM_020437 BC036753 AK315112	68781	+	AK097886 BC035614 AK054717 AL365512 NM_152841	118920	-	TSC_hg19_v1_chr22_-_26879750 AK057648 AK290211	123199	-	CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4##BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4##AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4##AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4##NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4##AK057648|HPS4|89781|Hermansky-Pudlak syndrome 4##AK290211|HPS4|89781|Hermansky-Pudlak syndrome 4	1.144439	CTCF.p2:9:1.000
chr3	138145194	138145295	reg1027516.p1	5.025	+	NM_001252090	-77275	+	TSC_hg19_v1_chr3_+_138067711 AK295640 NM_001252092	-77526	+	TSC_hg19_v1_chr3_+_138067476 NM_001085049 NM_001252093 BC047690 AF043938	-77733	+	NM_031913 TSC_hg19_v1_chr3_+_138153418	8172	+	TSC_hg19_v1_chr3_+_138153427 BC037292 AK125080 AK289530	8195	+	TSC_hg19_v1_chr3_-_138313097 AF202146 AF289495 AK225440 AK299003 AK295866 AK294587 AK301913 BC030598 NM_024491 AK314314	167866	-	NM_001252090|MRAS|22808|muscle RAS oncogene homolog##AK295640|MRAS|22808|muscle RAS oncogene homolog##NM_001252092|MRAS|22808|muscle RAS oncogene homolog##NM_001085049|MRAS|22808|muscle RAS oncogene homolog##NM_001252093|MRAS|22808|muscle RAS oncogene homolog##BC047690|MRAS|22808|muscle RAS oncogene homolog##AF043938|MRAS|22808|muscle RAS oncogene homolog##NM_031913|ESYT3|83850|extended synaptotagmin-like protein 3##BC037292|ESYT3|83850|extended synaptotagmin-like protein 3##AK125080|ESYT3|83850|extended synaptotagmin-like protein 3##AK289530|ESYT3|83850|extended synaptotagmin-like protein 3##AF202146|CEP70|80321|centrosomal protein 70kDa##AF289495|CEP70|80321|centrosomal protein 70kDa##AK225440|CEP70|80321|centrosomal protein 70kDa##AK299003|CEP70|80321|centrosomal protein 70kDa##AK295866|CEP70|80321|centrosomal protein 70kDa##AK294587|CEP70|80321|centrosomal protein 70kDa##AK301913|CEP70|80321|centrosomal protein 70kDa##BC030598|CEP70|80321|centrosomal protein 70kDa##NM_024491|CEP70|80321|centrosomal protein 70kDa##AK314314|CEP70|80321|centrosomal protein 70kDa	0.0	
chr8	145747902	145748082	reg1029082.p2	5.025	+	TSC_hg19_v1_chr8_+_145743412 NM_014665 AK289473 BC011377 D25216	-4619	+	TSC_hg19_v1_chr8_-_145743221 AB006532 NM_004260 BC020496	-4785	-	TSC_hg19_v1_chr8_+_145734481 BC011982 NM_138431	-13494	+	TSC_hg19_v1_chr8_-_145752408 BC111067 NM_001024678	4418	-	BC064829 BC036712 TSC_hg19_v1_chr8_-_145754451 BC064373 NM_001001795 BC073936	6441	-	AK092501 AX747574 TSC_hg19_v1_chr8_-_145770830	22764	-	NM_014665|LRRC14|9684|leucine rich repeat containing 14##AK289473|LRRC14|9684|leucine rich repeat containing 14##BC011377|LRRC14|9684|leucine rich repeat containing 14##D25216|LRRC14|9684|leucine rich repeat containing 14##AB006532|RECQL4|9401|RecQ protein-like 4##NM_004260|RECQL4|9401|RecQ protein-like 4##BC020496|RECQL4|9401|RecQ protein-like 4##BC011982|MFSD3|113655|major facilitator superfamily domain containing 3##NM_138431|MFSD3|113655|major facilitator superfamily domain containing 3##BC111067|LRRC24|441381|leucine rich repeat containing 24##NM_001024678|LRRC24|441381|leucine rich repeat containing 24##BC064829|C8orf82|414919|chromosome 8 open reading frame 82##BC064373|C8orf82|414919|chromosome 8 open reading frame 82##NM_001001795|C8orf82|414919|chromosome 8 open reading frame 82##BC073936|C8orf82|414919|chromosome 8 open reading frame 82##AK092501|ARHGAP39|80728|Rho GTPase activating protein 39	0.0	
chr11	74322497	74322592	reg1025308.p1	5.024	+	AK302677 AK316370 D26018 NM_006591 TSC_hg19_v1_chr11_+_74303654 BC092454 AK316301 BC108908 BC108909 BC032636 BC058840 BC041703 AB383722	-18881	+	TSC_hg19_v1_chr11_-_74204756 NM_001144869	-117794	-	CR936625 DQ192291 NM_005472	-143948	-	NM_015424 AK304519 AY358522 AY279090 AY279091	119661	-	BC142623 TSC_hg19_v1_chr11_-_74442472	119909	-	TSC_hg19_v1_chr11_+_74459915 AB082522 NM_001098638	137364	+	AK302677|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316370|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##D26018|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_006591|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC092454|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316301|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108908|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108909|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC032636|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC058840|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC041703|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_001144869|LIPT2|387787|lipoyl(octanoyl) transferase 2 (putative)##CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_015424|CHRDL2|25884|chordin-like 2##AK304519|CHRDL2|25884|chordin-like 2##AY358522|CHRDL2|25884|chordin-like 2##AY279090|CHRDL2|25884|chordin-like 2##AY279091|CHRDL2|25884|chordin-like 2##BC142623|CHRDL2|25884|chordin-like 2##AB082522|RNF169|254225|ring finger protein 169##NM_001098638|RNF169|254225|ring finger protein 169	0.438925	CTCF.p2:7:0.439
chr15	75091957	75092045	reg1002233.p1	5.024	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	-17145	+	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	-17576	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-50809	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	13171	+	AK024055 NM_001030005 AB072900 BC018026 AY286501	26989	+	TSC_hg19_v1_chr15_-_75135477 AB528889 CU691158 AK075047 BC056423 AK299380	43452	-	X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like##AK024055|CPLX3|594855|complexin 3##NM_001030005|CPLX3|594855|complexin 3##AB072900|CPLX3|594855|complexin 3##BC018026|CPLX3|594855|complexin 3##AY286501|CPLX3|594855|complexin 3##AK075047|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC056423|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK299380|ULK3|25989|unc-51-like kinase 3 (C. elegans)	0.24215	CTCF.p2:30:0.242
chr17	70117802	70117954	reg1027503.p4	5.024	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-638	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-708	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-719	+	AK000477 TSC_hg19_v1_chr17_-_70588944	471065	-	AF331643 TSC_hg19_v1_chr17_-_71088816	970938	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	970945	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr4	140576373	140576472	reg1028909.p2	5.024	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-98989	-	AL136904 NM_031296	-201462	+	TSC_hg19_v1_chr4_-_140374867 AK097885	-201548	-	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	10568	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	10712	+	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	497916	-	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AL136904|RAB33B|83452|RAB33B, member RAS oncogene family##NM_031296|RAB33B|83452|RAB33B, member RAS oncogene family##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)	0.76118	CTCF.p2:-32:0.761
chr5	151038816	151038985	reg1000570.p2	5.024	+	AF231022 NM_001447	-90396	-	TSC_hg19_v1_chr5_+_150827239 AY162213 BC136437 BC136438	-211656	+	AK309323 TSC_hg19_v1_chr5_+_150827187	-211711	+	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	27561	-	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	27608	-	TSC_hg19_v1_chr5_-_151138170 AK091843 AX747215 NM_004045 AK293063 BC112248 BC112250	99315	-	AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##AY162213|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136437|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136438|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AK309323|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK091843|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##NM_004045|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AK293063|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112248|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112250|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)	0.0	
chr6	74098538	74098662	reg1028842.p1	5.024	+	EU290647 NM_001080507	-19086	-	AB211062 NM_001017361 BC132844 BC137160 HQ258760	-26177	+	BC137549 BC137558 NM_001025290	-34602	-	NM_018665	5684	+	AK303324 TSC_hg19_v1_chr6_+_74104584 AK313686 BC056879	5981	+	AL136751 TSC_hg19_v1_chr6_+_74104600 BC066938 AM393499 AB463006 CU688208	6012	+	EU290647|OOEP|441161|oocyte expressed protein homolog (dog)##NM_001080507|OOEP|441161|oocyte expressed protein homolog (dog)##AB211062|C6orf221|154288|chromosome 6 open reading frame 221##NM_001017361|C6orf221|154288|chromosome 6 open reading frame 221##BC132844|C6orf221|154288|chromosome 6 open reading frame 221##BC137160|C6orf221|154288|chromosome 6 open reading frame 221##HQ258760|C6orf221|154288|chromosome 6 open reading frame 221##BC137549|DPPA5|340168|developmental pluripotency associated 5##BC137558|DPPA5|340168|developmental pluripotency associated 5##NM_001025290|DPPA5|340168|developmental pluripotency associated 5##NM_018665|DDX43|55510|DEAD (Asp-Glu-Ala-Asp) box polypeptide 43##AK303324|DDX43|55510|DEAD (Asp-Glu-Ala-Asp) box polypeptide 43##AK313686|DDX43|55510|DEAD (Asp-Glu-Ala-Asp) box polypeptide 43##BC056879|DDX43|55510|DEAD (Asp-Glu-Ala-Asp) box polypeptide 43##AL136751|DDX43|55510|DEAD (Asp-Glu-Ala-Asp) box polypeptide 43##BC066938|DDX43|55510|DEAD (Asp-Glu-Ala-Asp) box polypeptide 43##AM393499|DDX43|55510|DEAD (Asp-Glu-Ala-Asp) box polypeptide 43	0.824368	CTCF.p2:7:0.824
chr10	121446252	121446380	reg1005375.p2	5.023	+	TSC_hg19_v1_chr10_+_121411086 BC001445 AK291333 BC014656 DQ893416 DQ896772 CU675397 AB385565	-35180	+	TSC_hg19_v1_chr10_+_121411079 BC107786	-35241	+	TSC_hg19_v1_chr10_+_121411053 AL137582	-35263	+	TSC_hg19_v1_chr10_+_121485568 NM_001243195 NM_014937 AK307758	39222	+	TSC_hg19_v1_chr10_+_121485596 BC067820 AB023183	39298	+	TSC_hg19_v1_chr10_+_121485653 BC111493 BC052367 BC082755 AB385409	39389	+	AK291333|BAG3|9531|BCL2-associated athanogene 3##BC014656|BAG3|9531|BCL2-associated athanogene 3##DQ893416|BAG3|9531|BCL2-associated athanogene 3##DQ896772|BAG3|9531|BCL2-associated athanogene 3##BC107786|BAG3|9531|BCL2-associated athanogene 3##AL137582|BAG3|9531|BCL2-associated athanogene 3##NM_001243195|INPP5F|22876|inositol polyphosphate-5-phosphatase F##NM_014937|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK307758|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC067820|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AB023183|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC111493|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC052367|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC082755|INPP5F|22876|inositol polyphosphate-5-phosphatase F	0.0	
chr1	1626469	1626600	reg1029035.p1	5.023	+	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	-2317	-	BC092507 TSC_hg19_v1_chr1_-_1624149 AK125619	-2376	-	TSC_hg19_v1_chr1_-_1623947 CR936618 BC062371	-2569	-	TSC_hg19_v1_chr1_-_1655767 AK303446 AF067518 AF067519 AF067520 AF067521 AF067522 AF067523 AK301495 AK304679 BC009375 AF067512 AF067513 AF067514 AF067515 AF067516 AF067517 AK303451 NM_033486 NM_033487 NM_033488 NM_033489 NM_033492 NM_033493 U04816 U04817 U04818 U04824 U07704 U07705 NM_024011 NM_033529	29242	-	AL049665 NM_001199787 NM_182838 TSC_hg19_v1_chr1_-_1677454 BC110653	50927	-	AK296722 NM_001198995	63546	-	AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B##BC092507|SLC35E2B|728661|solute carrier family 35, member E2B##AK125619|SLC35E2B|728661|solute carrier family 35, member E2B##CR936618|SLC35E2B|728661|solute carrier family 35, member E2B##BC062371|SLC35E2|9906|solute carrier family 35, member E2##AK303446|CDK11B|984|cyclin-dependent kinase 11B##AF067518|CDK11A|728642|cyclin-dependent kinase 11A##AF067519|CDK11A|728642|cyclin-dependent kinase 11A##AF067520|CDK11A|728642|cyclin-dependent kinase 11A##AF067521|CDK11A|728642|cyclin-dependent kinase 11A##AF067522|CDK11A|728642|cyclin-dependent kinase 11A##AF067523|CDK11A|728642|cyclin-dependent kinase 11A##AK301495|CDK11B|984|cyclin-dependent kinase 11B##AK304679|CDK11B|984|cyclin-dependent kinase 11B##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AF067512|CDK11B|984|cyclin-dependent kinase 11B##AF067513|CDK11B|984|cyclin-dependent kinase 11B##AF067514|CDK11B|984|cyclin-dependent kinase 11B##AF067515|CDK11B|984|cyclin-dependent kinase 11B##AF067516|CDK11B|984|cyclin-dependent kinase 11B##AF067517|CDK11B|984|cyclin-dependent kinase 11B##AK303451|CDK11B|984|cyclin-dependent kinase 11B##NM_033486|CDK11B|984|cyclin-dependent kinase 11B##NM_033487|CDK11B|984|cyclin-dependent kinase 11B##NM_033488|CDK11B|984|cyclin-dependent kinase 11B##NM_033489|CDK11B|984|cyclin-dependent kinase 11B##NM_033492|CDK11B|984|cyclin-dependent kinase 11B##NM_033493|CDK11B|984|cyclin-dependent kinase 11B##U04816|CDK11B|984|cyclin-dependent kinase 11B##U04817|CDK11B|984|cyclin-dependent kinase 11B##U04818|CDK11B|984|cyclin-dependent kinase 11B##U04824|CDK11B|984|cyclin-dependent kinase 11B##U07704|CDK11A|728642|cyclin-dependent kinase 11A##U07705|CDK11A|728642|cyclin-dependent kinase 11A##NM_024011|CDK11A|728642|cyclin-dependent kinase 11A##NM_033529|CDK11A|728642|cyclin-dependent kinase 11A##AL049665|SLC35E2|9906|solute carrier family 35, member E2##NM_001199787|SLC35E2|9906|solute carrier family 35, member E2##NM_182838|SLC35E2|9906|solute carrier family 35, member E2##BC110653|SLC35E2B|728661|solute carrier family 35, member E2B##AK296722|NADK|65220|NAD kinase##NM_001198995|NADK|65220|NAD kinase	0.125791	
chr15	23076229	23076409	reg1023422.p2	5.023	+	TSC_hg19_v1_chr15_-_23034411 AK096305 AK313584 NM_001008860 NM_001008892 NM_001008894 NM_001184888 NM_001184889 NM_030922	-41903	-	TSC_hg19_v1_chr15_-_23034365 AK300843	-41952	-	TSC_hg19_v1_chr15_-_23034343 BC011775 AY732242	-41985	-	AK057846 BC103705 AK314073 AB590048 TSC_hg19_v1_chr15_-_23086444 NM_144599	10055	-	BC025678 NM_001142275	10523	-	TSC_hg19_v1_chr15_-_23115247 BC044583	38929	-	AK096305|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AK313584|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001008860|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001008892|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001008894|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001184888|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001184889|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_030922|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AK300843|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##BC011775|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AY732242|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AK057846|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##BC103705|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##AK314073|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##NM_144599|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##BC025678|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##NM_001142275|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##BC044583|LOC283683|283683|uncharacterized LOC283683	0.0	
chr20	29591673	29591781	reg1024775.p1	5.023	+	TSC_hg19_v1_chr20_-_26189755 BC036544	-3401916	-	TSC_hg19_v1_chr20_-_25677490 AK056184 BC021298 NM_015655 AK291235	-3914368	-	BC034569 TSC_hg19_v1_chr20_+_25604757	-3987008	+	TSC_hg19_v1_chr20_+_29611882 BC062724 BC062743 AK307061 BC095491 AK057099	20198	+	DQ012019 NM_001037730	253739	+	DQ012020 NM_001037731	304660	-	BC036544|LOC284801|284801|uncharacterized LOC284801##AK056184|ZNF337|26152|zinc finger protein 337##BC021298|ZNF337|26152|zinc finger protein 337##NM_015655|ZNF337|26152|zinc finger protein 337##AK291235|ZNF337|26152|zinc finger protein 337##BC034569|ZNF337|26152|zinc finger protein 337##BC062724|FRG1B|284802|FSHD region gene 1 family, member B##BC062743|FRG1B|284802|FSHD region gene 1 family, member B##BC095491|FRG1B|284802|FSHD region gene 1 family, member B##AK057099|LOC642236|642236|FSHD region gene 1 pseudogene##DQ012019|DEFB115|245929|defensin, beta 115##NM_001037730|DEFB115|245929|defensin, beta 115##DQ012020|DEFB116|245930|defensin, beta 116##NM_001037731|DEFB116|245930|defensin, beta 116	0.457687	CTCF.p2:-8:0.458
chr6	16761866	16761962	reg1025821.p1	5.023	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	-217	-	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-523063	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-618604	+	NM_001190766	340574	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	519940	+	NM_001143941	520380	+	BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24##NM_001143941|RBM24|221662|RNA binding motif protein 24	0.804738	CTCF.p2:19:0.805
chr16	23308413	23308542	reg1026443.p1	5.022	+	U48936 BC059391 NM_001039 TSC_hg19_v1_chr16_+_23194066	-114425	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	-147928	-	AB209794 AF105374 AF105375 NM_006043 BC093734 BC093736	-482626	+	NM_000336 BC036352 X87159 AK313192	5150	+	TSC_hg19_v1_chr16_-_23464487 BC000549 BC037563 NM_153603	156018	-	TSC_hg19_v1_chr16_-_23521748 AB384559 CU674130 DQ892534 DQ895745 BC050620 AF165531	213258	-	U48936|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##BC059391|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_001039|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31##AB209794|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105374|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105375|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_006043|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093734|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093736|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_000336|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC036352|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##X87159|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##AK313192|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC000549|COG7|91949|component of oligomeric golgi complex 7##BC037563|COG7|91949|component of oligomeric golgi complex 7##NM_153603|COG7|91949|component of oligomeric golgi complex 7##DQ892534|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##DQ895745|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##BC050620|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF165531|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	0.987908	CTCF.p2:-40:0.976
chr21	27012106	27012248	reg1026807.p1	5.022	+	TSC_hg19_v1_chr21_+_27012067 AX810711 AB463809 AM392801 AM392870 AM393811 CU676060	-77	+	AY358361 BC017779 TSC_hg19_v1_chr21_+_27012056	-126	+	TSC_hg19_v1_chr21_+_27011769 AK312708 AY077698 AY016009 AX772824 AK294769	-340	+	NM_001197297 TSC_hg19_v1_chr21_+_27107277	95095	+	TSC_hg19_v1_chr21_-_27107216 AK311899 AL110183 BC066310 AY544129	95111	-	TSC_hg19_v1_chr21_+_27107322 NM_002040	95148	+	AM392801|JAM2|58494|junctional adhesion molecule 2##AM392870|JAM2|58494|junctional adhesion molecule 2##AM393811|JAM2|58494|junctional adhesion molecule 2##AY358361|JAM2|58494|junctional adhesion molecule 2##BC017779|JAM2|58494|junctional adhesion molecule 2##AK312708|JAM2|58494|junctional adhesion molecule 2##AY077698|JAM2|58494|junctional adhesion molecule 2##AY016009|JAM2|58494|junctional adhesion molecule 2##AX772824|JAM2|58494|junctional adhesion molecule 2##AK294769|JAM2|58494|junctional adhesion molecule 2##NM_001197297|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa##AK311899|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##AL110183|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##BC066310|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##AY544129|ATP5J|522|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6##NM_002040|GABPA|2551|GA binding protein transcription factor, alpha subunit 60kDa	0.581349	CTCF.p2:6:0.581
chr7	72416841	72416961	reg1030740.p1	5.022	+	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-20027	+	TSC_hg19_v1_chr7_+_72395623 AK123814 AB289621	-21276	+	TSC_hg19_v1_chr7_+_72349925 AB014518 NM_172020	-66966	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	8341	-	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	152130	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	305923	-	AK292548|POM121|9883|POM121 membrane glycoprotein##AK123814|POM121|9883|POM121 membrane glycoprotein##AB289621|POM121|9883|POM121 membrane glycoprotein##AB014518|POM121|9883|POM121 membrane glycoprotein##NM_172020|POM121|9883|POM121 membrane glycoprotein##BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5	0.997129	CTCF.p2:2:0.997
chr7	92875025	92875146	reg1022722.p1	5.022	+	BC017888 NM_017667 NM_024553 TSC_hg19_v1_chr7_+_92861678 AK126478 AL833112 AK055965 AK299582 AB100163 BC108708 BC132740 BC132742 AB058764 BC152424 CU676100 AB385511	-13359	+	TSC_hg19_v1_chr7_-_92855783 AK096002 AK298361 NM_001039372	-19302	-	BC136300 BC136301 BC046365 AY358345 NM_198151 BC139906	-26220	-	AB022178 NM_001164738	314036	-	AB022177 AK313996 NM_001164737 NM_001742	328953	-	CU675117 DQ892533 DQ895744 L27624 AY691946 D29992 AK075427 AK024817 AK075425 AK092499 AK129833 AK313260 BC005330 NM_006528 TSC_hg19_v1_chr7_-_93520066	644944	-	BC017888|CCDC132|55610|coiled-coil domain containing 132##NM_017667|CCDC132|55610|coiled-coil domain containing 132##NM_024553|CCDC132|55610|coiled-coil domain containing 132##AK126478|CCDC132|55610|coiled-coil domain containing 132##AL833112|CCDC132|55610|coiled-coil domain containing 132##AK055965|CCDC132|55610|coiled-coil domain containing 132##AK299582|CCDC132|55610|coiled-coil domain containing 132##AB100163|CCDC132|55610|coiled-coil domain containing 132##BC108708|CCDC132|55610|coiled-coil domain containing 132##BC132740|CCDC132|55610|coiled-coil domain containing 132##BC132742|CCDC132|55610|coiled-coil domain containing 132##AB058764|CCDC132|55610|coiled-coil domain containing 132##BC152424|CCDC132|55610|coiled-coil domain containing 132##AK096002|HEPACAM2|253012|HEPACAM family member 2##AK298361|HEPACAM2|253012|HEPACAM family member 2##NM_001039372|HEPACAM2|253012|HEPACAM family member 2##BC136300|HEPACAM2|253012|HEPACAM family member 2##BC136301|HEPACAM2|253012|HEPACAM family member 2##BC046365|HEPACAM2|253012|HEPACAM family member 2##AY358345|HEPACAM2|253012|HEPACAM family member 2##NM_198151|HEPACAM2|253012|HEPACAM family member 2##BC139906|HEPACAM2|253012|HEPACAM family member 2##AB022178|CALCR|799|calcitonin receptor##NM_001164738|CALCR|799|calcitonin receptor##AB022177|CALCR|799|calcitonin receptor##AK313996|CALCR|799|calcitonin receptor##NM_001164737|CALCR|799|calcitonin receptor##NM_001742|CALCR|799|calcitonin receptor##DQ892533|TFPI2|7980|tissue factor pathway inhibitor 2##DQ895744|TFPI2|7980|tissue factor pathway inhibitor 2##L27624|TFPI2|7980|tissue factor pathway inhibitor 2##AY691946|TFPI2|7980|tissue factor pathway inhibitor 2##D29992|TFPI2|7980|tissue factor pathway inhibitor 2##AK075427|TFPI2|7980|tissue factor pathway inhibitor 2##AK024817|TFPI2|7980|tissue factor pathway inhibitor 2##AK075425|TFPI2|7980|tissue factor pathway inhibitor 2##AK092499|TFPI2|7980|tissue factor pathway inhibitor 2##AK129833|TFPI2|7980|tissue factor pathway inhibitor 2##AK313260|TFPI2|7980|tissue factor pathway inhibitor 2##BC005330|TFPI2|7980|tissue factor pathway inhibitor 2##NM_006528|TFPI2|7980|tissue factor pathway inhibitor 2	0.997863	CTCF.p2:-56:0.998
chr2	114647208	114647316	reg1025242.p1	5.021	+	AK025657 AK315719 TSC_hg19_v1_chr2_-_114514220 BC050096 BC018537 NM_025181	-132965	-	AF529364 CU676258 TSC_hg19_v1_chr2_-_114514079 AY358620	-133184	-	TSC_hg19_v1_chr2_+_114384849 AK289496 AF095350 AF095351 BC126129 BC144050 BC144052	-262356	+	TSC_hg19_v1_chr2_+_114647549 BC044590 NM_005721 AF127773	285	+	TSC_hg19_v1_chr2_+_114647665 AK316213	403	+	TSC_hg19_v1_chr2_+_114647673 AK303988	410	+	AK025657|SLC35F5|80255|solute carrier family 35, member F5##AK315719|SLC35F5|80255|solute carrier family 35, member F5##BC050096|SLC35F5|80255|solute carrier family 35, member F5##BC018537|SLC35F5|80255|solute carrier family 35, member F5##NM_025181|SLC35F5|80255|solute carrier family 35, member F5##AF529364|SLC35F5|80255|solute carrier family 35, member F5##AY358620|SLC35F5|80255|solute carrier family 35, member F5##AK289496|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095350|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095351|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC126129|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144050|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144052|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC044590|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##NM_005721|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AF127773|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AK316213|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AK303988|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	0.0	
chr3	69488985	69489105	reg1023339.p2	5.021	+	NM_015123 BC057836	-53604	-	AB023230 TSC_hg19_v1_chr3_-_69435240	-53814	-	TSC_hg19_v1_chr3_-_69299315 AK295045	-189735	-	TSC_hg19_v1_chr3_-_69591738 AK091076	102712	-	TSC_hg19_v1_chr3_+_69788632 NM_198159 AK291318 AL110195 AB006909 AB527520	299608	+	TSC_hg19_v1_chr3_+_69812620 AK296129 NM_001184967	323618	+	NM_015123|FRMD4B|23150|FERM domain containing 4B##BC057836|FRMD4B|23150|FERM domain containing 4B##AB023230|FRMD4B|23150|FERM domain containing 4B##AK295045|FRMD4B|23150|FERM domain containing 4B##AK091076|FRMD4B|23150|FERM domain containing 4B##NM_198159|MITF|4286|microphthalmia-associated transcription factor##AK291318|MITF|4286|microphthalmia-associated transcription factor##AL110195|MITF|4286|microphthalmia-associated transcription factor##AB006909|MITF|4286|microphthalmia-associated transcription factor##AK296129|MITF|4286|microphthalmia-associated transcription factor##NM_001184967|MITF|4286|microphthalmia-associated transcription factor	0.842463	CTCF.p2:-9:0.842
chr10	11239431	11239586	reg1025469.p2	5.020	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-32016	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-32062	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-32083	+	NM_001080491	334765	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	414128	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	544890	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.0	
chr10	71389919	71390021	reg1030141.p2	5.020	+	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	-56870	-	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	-178637	+	TSC_hg19_v1_chr10_+_71211220 NM_012339 BC003157 BC004161 AF120266	-178709	+	NM_145306 BC013587	37	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	171687	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	171719	+	BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3##NM_012339|TSPAN15|23555|tetraspanin 15##BC003157|TSPAN15|23555|tetraspanin 15##BC004161|TSPAN15|23555|tetraspanin 15##AF120266|TSPAN15|23555|tetraspanin 15##NM_145306|C10orf35|219738|chromosome 10 open reading frame 35##BC013587|C10orf35|219738|chromosome 10 open reading frame 35##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1	0.595047	CTCF.p2:-25:0.595
chr2	134318576	134318756	reg1004685.p1	5.020	+	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-139312	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-778972	-	NM_001077427 AK309668	-889556	-	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	7372	-	NM_002410 D17716 AF113921	693219	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	1157890	-	AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1##AK309668|LYPD1|116372|LY6/PLAUR domain containing 1##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163	0.0	
chr4	86581963	86582141	reg1028044.p1	5.020	+	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	-185709	+	NM_014991	-694509	-	NM_001263 U65887	-1077959	+	TSC_hg19_v1_chr4_+_86699850 NM_001042669	117796	+	BC098580 TSC_hg19_v1_chr4_+_86699865 AK098193	117846	+	AK307423 TSC_hg19_v1_chr4_+_86749064	167002	+	NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_001042669|ARHGAP24|83478|Rho GTPase activating protein 24##BC098580|ARHGAP24|83478|Rho GTPase activating protein 24##AK098193|ARHGAP24|83478|Rho GTPase activating protein 24##AK307423|ARHGAP24|83478|Rho GTPase activating protein 24	0.0	
chr5	163406053	163406155	reg1025421.p1	5.020	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-473461	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-475816	+	NM_001142556 NM_001142557 NM_012484 NM_012485 BC057235 AK313603 BC030505 TSC_hg19_v1_chr5_+_162887665 AK302975 BC006984 AK303616 BC070281 BC017793 U29343 AF032862 BC108904 BC108905 BC107869 AK290577	-518509	+	HE578282 HE578283 NM_001122679	3305738	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	4312717	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	4507370	+	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001142556|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001142557|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012484|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012485|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC057235|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK313603|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC030505|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK302975|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK303616|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC070281|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC017793|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##U29343|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AF032862|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108904|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108905|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC107869|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK290577|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.059647	
chr8	116286392	116286530	reg1030187.p2	5.020	+	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	-1837332	-	AB114605 NM_198124	-1897080	-	BC028739 AK313469 AF167082 NM_014379 AK297393	-5299495	-	TSC_hg19_v1_chr8_-_116680208 AK304046	393759	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	394704	-	TSC_hg19_v1_chr8_-_116681365 AF183810	394874	-	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I	0.027006	
chr20	46979464	46979588	reg1027239.p1	5.019	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-564208	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-564774	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-848842	+	AB037836 TSC_hg19_v1_chr20_-_47444291	464760	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	464913	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	558792	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.673398	CTCF.p2:-11:0.673
chr10	105899126	105899242	reg1029581.p1	5.018	+	NM_145247 BC140835 NM_001002759 BC043256 AK291184	-17275	+	BC004478 D63465 TSC_hg19_v1_chr10_-_105845639 NM_000494	-53555	-	AK300117 TSC_hg19_v1_chr10_-_105845560 M91669 AK300226 AK309940	-53615	-	AL136901 TSC_hg19_v1_chr10_-_105992103 AK026597 AK295018 BC071565 BC036647 NM_025145	92910	-	NM_001191003	114767	+	NM_001191002 NM_004832 BX537431 TSC_hg19_v1_chr10_+_106014658 AK313680 BC000127 AF212303 U90313 AB590772	115397	+	NM_145247|SFR1|119392|SWI5-dependent recombination repair 1##BC140835|SFR1|119392|SWI5-dependent recombination repair 1##NM_001002759|SFR1|119392|SWI5-dependent recombination repair 1##BC043256|SFR1|119392|SWI5-dependent recombination repair 1##AK291184|SFR1|119392|SWI5-dependent recombination repair 1##BC004478|COL17A1|1308|collagen, type XVII, alpha 1##D63465|COL17A1|1308|collagen, type XVII, alpha 1##NM_000494|COL17A1|1308|collagen, type XVII, alpha 1##M91669|COL17A1|1308|collagen, type XVII, alpha 1##AK309940|COL17A1|1308|collagen, type XVII, alpha 1##AL136901|WDR96|80217|WD repeat domain 96##AK026597|WDR96|80217|WD repeat domain 96##AK295018|WDR96|80217|WD repeat domain 96##BC071565|WDR96|80217|WD repeat domain 96##BC036647|WDR96|80217|WD repeat domain 96##NM_025145|WDR96|80217|WD repeat domain 96##NM_001191003|GSTO1|9446|glutathione S-transferase omega 1##NM_001191002|GSTO1|9446|glutathione S-transferase omega 1##NM_004832|GSTO1|9446|glutathione S-transferase omega 1##BX537431|GSTO1|9446|glutathione S-transferase omega 1##AK313680|GSTO1|9446|glutathione S-transferase omega 1##BC000127|GSTO1|9446|glutathione S-transferase omega 1##AF212303|GSTO1|9446|glutathione S-transferase omega 1##U90313|GSTO1|9446|glutathione S-transferase omega 1	0.0	
chr3	3237957	3238080	reg1031516.p1	5.018	+	TSC_hg19_v1_chr3_-_3221401 NM_001173482 NM_016302	-16617	-	TSC_hg19_v1_chr3_-_3221386 AK301423	-16632	-	TSC_hg19_v1_chr3_-_3221376 AF117230 CU675978 CU688352 AK058191 BC059171 CR627060 AK027507 AK312577 BC017419 BC067811	-16646	-	TSC_hg19_v1_chr3_+_3841114 NM_020873	603081	+	AK307537 NM_001243723 NM_006515 TSC_hg19_v1_chr3_+_4345015	1106990	+	TSC_hg19_v1_chr3_+_4345048 AK222734 AK297865 AK302296 AB590082 AF054989 BC011635 BC008931 U80776 AY952295 CU679994	1107045	+	NM_001173482|CRBN|51185|cereblon##NM_016302|CRBN|51185|cereblon##AK301423|CRBN|51185|cereblon##AF117230|CRBN|51185|cereblon##AK058191|CRBN|51185|cereblon##BC059171|CRBN|51185|cereblon##CR627060|CRBN|51185|cereblon##AK027507|CRBN|51185|cereblon##AK312577|CRBN|51185|cereblon##BC017419|CRBN|51185|cereblon##BC067811|CRBN|51185|cereblon##NM_020873|LRRN1|57633|leucine rich repeat neuronal 1##AK307537|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_001243723|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_006515|SETMAR|6419|SET domain and mariner transposase fusion gene##AK222734|SETMAR|6419|SET domain and mariner transposase fusion gene##AK297865|SETMAR|6419|SET domain and mariner transposase fusion gene##AK302296|SETMAR|6419|SET domain and mariner transposase fusion gene##AF054989|SETMAR|6419|SET domain and mariner transposase fusion gene##BC011635|SETMAR|6419|SET domain and mariner transposase fusion gene##BC008931|SETMAR|6419|SET domain and mariner transposase fusion gene##U80776|SETMAR|6419|SET domain and mariner transposase fusion gene##AY952295|SETMAR|6419|SET domain and mariner transposase fusion gene	0.782906	CTCF.p2:4:0.783
chr4	174178795	174178944	reg1000458.p1	5.018	+	BC040577 TSC_hg19_v1_chr4_-_174090813	-88062	-	BC043556 TSC_hg19_v1_chr4_-_174090314	-88559	-	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	-88917	+	Z17240 BT019782 BT019783 AB463732 DQ892288 DQ895487 NM_001130689 TSC_hg19_v1_chr4_-_174255014	76006	-	BC001063 BC100019 BC021054 TSC_hg19_v1_chr4_-_174255505 BC000903 AK311864 NM_001130688 NM_002129	76660	-	TSC_hg19_v1_chr4_+_174292088 NM_003864 AF055993	113194	+	NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##Z17240|HMGB2|3148|high mobility group box 2##BT019782|HMGB2|3148|high mobility group box 2##BT019783|HMGB2|3148|high mobility group box 2##DQ892288|HMGB2|3148|high mobility group box 2##DQ895487|HMGB2|3148|high mobility group box 2##NM_001130689|HMGB2|3148|high mobility group box 2##BC001063|HMGB2|3148|high mobility group box 2##BC100019|HMGB2|3148|high mobility group box 2##BC000903|HMGB2|3148|high mobility group box 2##AK311864|HMGB2|3148|high mobility group box 2##NM_001130688|HMGB2|3148|high mobility group box 2##NM_002129|HMGB2|3148|high mobility group box 2##NM_003864|SAP30|8819|Sin3A-associated protein, 30kDa##AF055993|SAP30|8819|Sin3A-associated protein, 30kDa	0.0	
chr6	166901645	166901713	reg1036237.p2	5.018	+	TSC_hg19_v1_chr6_-_166796469 AF125101 AF151887 NM_016098	-105169	-	CU674406 TSC_hg19_v1_chr6_-_166796429 BC000810 AK312201 AK310934	-105270	-	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	-145645	-	DQ891864 DQ895053 L07598 TSC_hg19_v1_chr6_-_167040629	138898	-	TSC_hg19_v1_chr6_-_167040662 X85106	138990	-	TSC_hg19_v1_chr6_-_167040713 BC002363 NM_021135	139039	-	AF125101|BRP44L|51660|brain protein 44-like##AF151887|BRP44L|51660|brain protein 44-like##NM_016098|BRP44L|51660|brain protein 44-like##BC000810|BRP44L|51660|brain protein 44-like##AK312201|BRP44L|51660|brain protein 44-like##AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1##DQ891864|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##DQ895053|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##L07598|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##X85106|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	0.0	
chr8	123746098	123746278	reg1004578.p2	5.018	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-1092562	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1921682	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1921918	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	47723	+	BC042145 TSC_hg19_v1_chr8_+_123794000	47806	+	TSC_hg19_v1_chr8_+_123794108 AB020661	47915	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.0	
chr12	108285879	108286008	reg1027471.p1	5.017	+	AY238895 NM_203436	-117782	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-130942	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	-131033	-	BC110330 AB018332 NM_014653	237544	+	NM_001142345	428495	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	447141	-	AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1	0.748369	CTCF.p2:-4:0.748
chr2	121852983	121853080	reg1027612.p1	5.017	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	-298138	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-749234	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-842527	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	189742	-	TSC_hg19_v1_chr2_-_122159142 CR749627	306124	-	AK297259 TSC_hg19_v1_chr2_-_122247924	394888	-	NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1##AK297259|CLASP1|23332|cytoplasmic linker associated protein 1	0.974841	CTCF.p2:5:0.975
chr5	1485205	1485351	reg1023640.p1	5.017	+	S46955 EF174603 M95167 NM_001044	-39752	-	AB045223 DQ892147 DQ895343 AK027306 BC025305 NM_030782 TSC_hg19_v1_chr5_-_1345095	-140256	-	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	-190187	-	CU676500 BC020166 AK090444 TSC_hg19_v1_chr5_-_1494996	9656	-	TSC_hg19_v1_chr5_-_1523908 AB244719 AB463849	38656	-	TSC_hg19_v1_chr5_-_1524086 NM_024830	38784	-	S46955|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##EF174603|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##M95167|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##NM_001044|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##AB045223|CLPTM1L|81037|CLPTM1-like##DQ892147|CLPTM1L|81037|CLPTM1-like##DQ895343|CLPTM1L|81037|CLPTM1-like##AK027306|CLPTM1L|81037|CLPTM1-like##BC025305|CLPTM1L|81037|CLPTM1-like##NM_030782|CLPTM1L|81037|CLPTM1-like##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase##BC020166|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AK090444|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AB244719|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##NM_024830|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1	0.0	
chr9	1922153	1922295	reg1028607.p2	5.017	+	AF130729 NM_181872	-871615	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-871854	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-871880	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	93072	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	699583	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	699850	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.330042	CTCF.p2:12:0.330
chr14	89897467	89897627	reg1021670.p2	5.016	+	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	-14137	-	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-18771	-	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-606554	+	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	188048	-	BC001787 BX247991 AK298930 AK094740 NM_145231	523513	-	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	524699	+	BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1	0.0	
chr7	101628427	101628607	reg1029776.p1	5.016	+	M74099 NM_181552	-167636	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-169308	+	BC002778 NM_138403	-355942	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	299880	+	TSC_hg19_v1_chr7_+_101928431 AB000520	299926	+	NM_001146210	368371	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.0	
chr9	12776408	12776589	reg1028143.p2	5.016	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	-717	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	-1482	+	NM_000550 X51420 BC052608	-83073	+	AB384682 AF093419 BC140793 BC144564 NM_003829	473840	-	AB210041 TSC_hg19_v1_chr9_-_13279602	503084	-	BX537698 TSC_hg19_v1_chr9_-_14087002	1310454	-	HQ257895|C9orf150|286343|chromosome 9 open reading frame 150##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##AF093419|MPDZ|8777|multiple PDZ domain protein##BC140793|MPDZ|8777|multiple PDZ domain protein##BC144564|MPDZ|8777|multiple PDZ domain protein##NM_003829|MPDZ|8777|multiple PDZ domain protein##AB210041|MPDZ|8777|multiple PDZ domain protein##BX537698|NFIB|4781|nuclear factor I/B	0.098601	
chr11	41267371	41267524	reg1029658.p2	5.015	+	AB046800 NM_020929	-951784	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-952853	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-4647645	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	2066071	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	2066117	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	2066193	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.016727	
chr12	49750971	49751097	reg1027123.p1	5.015	+	BC033236 NM_024902	-9994	+	TSC_hg19_v1_chr12_+_49740718 AK055747	-10331	+	BC110812 AF466366 NM_001008223	-20071	-	TSC_hg19_v1_chr12_+_49760679 AK095582 NM_023071	9655	+	TSC_hg19_v1_chr12_+_49761253 BC017767 AL833614 BC048299 AK292334 AK023202 BX648916 BC032441	10360	+	TSC_hg19_v1_chr12_+_49932842 AB033108 NM_012284 BC144254 BC150602 AB022696 AB384589	181986	+	BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##AK055747|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##BC110812|C1QL4|338761|complement component 1, q subcomponent-like 4##AF466366|C1QL4|338761|complement component 1, q subcomponent-like 4##NM_001008223|C1QL4|338761|complement component 1, q subcomponent-like 4##AK095582|SPATS2|65244|spermatogenesis associated, serine-rich 2##NM_023071|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2##AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2##BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2##AB033108|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##NM_012284|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC144254|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC150602|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AB022696|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3	0.996368	CTCF.p2:23:0.996
chr2	25829913	25830013	reg1029287.p2	5.015	+	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	-264501	-	TSC_hg19_v1_chr2_-_25565353 AB208833	-264600	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	-264635	-	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	66438	-	AB385496 TSC_hg19_v1_chr2_-_26101159	271166	-	TSC_hg19_v1_chr2_-_26101174 AB084279	271210	-	BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)	0.711028	CTCF.p2:-15:0.711
chr3	46968409	46968589	reg1024696.p1	5.015	+	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	-44757	+	BC112221 BC112247 NM_000316 U17418 X68596	-49250	+	AF174483 CU679491 X07373 M24122 AK312044 BC009790 NM_000258	-63574	-	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	49746	-	TSC_hg19_v1_chr3_+_47021155 NM_015175 AK131104 AB384492	52748	+	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	60971	+	BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor##BC112221|PTH1R|5745|parathyroid hormone 1 receptor##BC112247|PTH1R|5745|parathyroid hormone 1 receptor##NM_000316|PTH1R|5745|parathyroid hormone 1 receptor##U17418|PTH1R|5745|parathyroid hormone 1 receptor##X68596|PTH1R|5745|parathyroid hormone 1 receptor##AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12##NM_015175|NBEAL2|23218|neurobeachin-like 2##AK131104|NBEAL2|23218|neurobeachin-like 2##AK092871|NBEAL2|23218|neurobeachin-like 2	0.0	
chr7	129949937	129950109	reg1028972.p2	5.015	+	AK290993 NM_001163446 NM_016352 BC052289 AK310933 AK298553 AK298550 AK299023 AY358699 AF095719 AB590729 CU690898 HQ448429	-17027	+	BC007009 NM_001869 BC014571 BC015140 AK293378 U19977 DQ893811 CU675491 BT007403	-43309	+	BC017587 NM_145268 AK097635	-102315	+	NM_001127441 NM_001127442 NM_080385 AK093288 AK315256 AX748034 BC039362 AY155230 BC053681 BC042996 AK131191 AY155229	34641	+	NM_001868 AK131054 AK291493 AK293366 BC005279 X67318 CU675077 DQ890565 DQ893728 BT007313	70302	+	BC056162 AK314676 TSC_hg19_v1_chr7_-_130080886 BC018789 AK026098 AJ278890 NM_018718 AK298618 AK311382 AF429308 AF429309	130854	-	AK290993|CPA4|51200|carboxypeptidase A4##NM_001163446|CPA4|51200|carboxypeptidase A4##NM_016352|CPA4|51200|carboxypeptidase A4##BC052289|CPA4|51200|carboxypeptidase A4##AK310933|CPA4|51200|carboxypeptidase A4##AK298553|CPA4|51200|carboxypeptidase A4##AK298550|CPA4|51200|carboxypeptidase A4##AK299023|CPA4|51200|carboxypeptidase A4##AY358699|CPA4|51200|carboxypeptidase A4##AF095719|CPA4|51200|carboxypeptidase A4##HQ448429|CPA4|51200|carboxypeptidase A4##BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)##AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)##U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)##DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)##BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC017587|C7orf45|136263|chromosome 7 open reading frame 45##NM_145268|C7orf45|136263|chromosome 7 open reading frame 45##AK097635|C7orf45|136263|chromosome 7 open reading frame 45##NM_001127441|CPA5|93979|carboxypeptidase A5##NM_001127442|CPA5|93979|carboxypeptidase A5##NM_080385|CPA5|93979|carboxypeptidase A5##AK093288|CPA5|93979|carboxypeptidase A5##AK315256|CPA5|93979|carboxypeptidase A5##BC039362|CPA5|93979|carboxypeptidase A5##AY155230|CPA5|93979|carboxypeptidase A5##BC053681|CPA5|93979|carboxypeptidase A5##BC042996|CPA5|93979|carboxypeptidase A5##AK131191|CPA5|93979|carboxypeptidase A5##AY155229|CPA5|93979|carboxypeptidase A5##NM_001868|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK131054|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK291493|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK293366|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC005279|CPA1|1357|carboxypeptidase A1 (pancreatic)##X67318|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ890565|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ893728|CPA1|1357|carboxypeptidase A1 (pancreatic)##BT007313|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC056162|CEP41|95681|centrosomal protein 41kDa##AK314676|CEP41|95681|centrosomal protein 41kDa##BC018789|CEP41|95681|centrosomal protein 41kDa##AK026098|CEP41|95681|centrosomal protein 41kDa##AJ278890|CEP41|95681|centrosomal protein 41kDa##NM_018718|CEP41|95681|centrosomal protein 41kDa##AK298618|CEP41|95681|centrosomal protein 41kDa##AK311382|CEP41|95681|centrosomal protein 41kDa##AF429308|CEP41|95681|centrosomal protein 41kDa##AF429309|CEP41|95681|centrosomal protein 41kDa	0.0	
chr8	22832975	22833126	reg1024029.p3	5.015	+	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	-47726	-	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-282266	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-282545	-	AK092617 BC034917 NM_001160036	11873	+	NM_001160037	20310	+	TSC_hg19_v1_chr8_+_22857067 AB018260 NM_015178	24027	+	AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2##AB018260|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_015178|RHOBTB2|23221|Rho-related BTB domain containing 2	0.0	
chr8	23082523	23082703	reg1027628.p1	5.015	+	FJ795027 AB590225 BT006906 CU680426 DQ891791 DQ894973 JF729355 U90875 TSC_hg19_v1_chr8_-_23082598 AK291299 BC012866	-1	-	AF023849 AF021232 AF021233 AF029761 AY358285 BC052270 AK313528 NM_003840 TSC_hg19_v1_chr8_-_23021544	-61118	-	NM_003841 AK298664 BC017852 TSC_hg19_v1_chr8_+_22960433 AK313213 AK298718 AF012536 AY358281 AF016267 AF033854 AF014794 BC125041 BC125042 AF020502 AF012629 CR541857	-122133	+	TSC_hg19_v1_chr8_-_23082664 NM_003844	53	-	AK097202 NM_152272 BC042050	18545	+	TSC_hg19_v1_chr8_+_23104147 AK315664 AK021776	21522	+	FJ795027|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BT006906|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ891791|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ894973|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##JF729355|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##U90875|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##AK291299|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BC012866|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##AF023849|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF021232|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF021233|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF029761|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AY358285|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##BC052270|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AK313528|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##NM_003840|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##NM_003841|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298664|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC017852|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK313213|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298718|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012536|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AY358281|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF016267|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF033854|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF014794|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125041|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125042|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF020502|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012629|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##CR541857|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##NM_003844|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##AK097202|CHMP7|91782|charged multivesicular body protein 7##NM_152272|CHMP7|91782|charged multivesicular body protein 7##BC042050|CHMP7|91782|charged multivesicular body protein 7##AK315664|CHMP7|91782|charged multivesicular body protein 7##AK021776|CHMP7|91782|charged multivesicular body protein 7	0.0	
chr9	130741620	130741800	reg1027912.p1	5.015	+	BC137087 BC137088 BC047949 NM_203305 BC142952	-28779	-	BC015233 NM_003863	-40948	-	TSC_hg19_v1_chr9_-_130700134 AF061729 BC107863 AB013361 AK312121	-41567	-	TSC_hg19_v1_chr9_-_130742813 AK058004 NM_001035254	1099	-	AK122729 NM_197956	87888	-	TSC_hg19_v1_chr9_+_130830492 AK290991 NM_001006641	88773	+	BC137087|FAM102A|399665|family with sequence similarity 102, member A##BC137088|FAM102A|399665|family with sequence similarity 102, member A##BC047949|FAM102A|399665|family with sequence similarity 102, member A##NM_203305|FAM102A|399665|family with sequence similarity 102, member A##BC142952|FAM102A|399665|family with sequence similarity 102, member A##BC015233|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##NM_003863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AF061729|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##BC107863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AB013361|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK312121|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK058004|FAM102A|399665|family with sequence similarity 102, member A##NM_001035254|FAM102A|399665|family with sequence similarity 102, member A##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1##AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	0.0	
chrX	47400607	47400730	reg1026050.p1	5.015	+	BC015023 NM_007130 NM_153380	-58324	-	U28687 NM_003446 BC075003 AB528013 EU446919	-170645	+	TSC_hg19_v1_chrX_+_47092422 AK055588 AK098394 BC073960 BC063668 AB073597 BC000350 AB385092 U44839 AK294635	-308203	+	NM_001654 X04790 TSC_hg19_v1_chrX_+_47420605 AB208831 AK300975 AK130043 AK297453 AK307747 BC002466 BC007514	19899	+	TSC_hg19_v1_chrX_+_47441773 NM_003254 AK074854 AK296116 BC000866 BC007097	41055	+	TSC_hg19_v1_chrX_+_47441834 X03124 M12670 AK310206 AK311937 AK307222 M59906 X02598	41155	+	BC015023|ZNF41|7592|zinc finger protein 41##NM_007130|ZNF41|7592|zinc finger protein 41##NM_153380|ZNF41|7592|zinc finger protein 41##U28687|ZNF157|7712|zinc finger protein 157##NM_003446|ZNF157|7712|zinc finger protein 157##BC075003|ZNF157|7712|zinc finger protein 157##EU446919|ZNF157|7712|zinc finger protein 157##AK055588|USP11|8237|ubiquitin specific peptidase 11##AK098394|USP11|8237|ubiquitin specific peptidase 11##BC073960|USP11|8237|ubiquitin specific peptidase 11##BC063668|USP11|8237|ubiquitin specific peptidase 11##AB073597|USP11|8237|ubiquitin specific peptidase 11##BC000350|USP11|8237|ubiquitin specific peptidase 11##U44839|USP11|8237|ubiquitin specific peptidase 11##AK294635|USP11|8237|ubiquitin specific peptidase 11##NM_001654|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##X04790|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AB208831|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK300975|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK130043|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK297453|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK307747|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC002466|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC007514|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##NM_003254|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK074854|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK296116|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC000866|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC007097|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X03124|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M12670|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK310206|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK311937|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M59906|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X02598|TIMP1|7076|TIMP metallopeptidase inhibitor 1	0.628657	CTCF.p2:-17:0.629
chr10	64287011	64287135	reg1022341.p1	5.014	+	AJ505150 NM_199452	-6867	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-153030	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-258534	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	277469	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	277584	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	289024	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.849722	CTCF.p2:-79:0.850
chr10	98994285	98994429	reg1029781.p1	5.014	+	AB017167 TSC_hg19_v1_chr10_-_98945702 BC028105 AB011537 BC146761 NM_003061 BC139909	-48672	-	TSC_hg19_v1_chr10_-_98945606 BC146851	-48762	-	AY029183 AB383997 TSC_hg19_v1_chr10_-_98945570	-48883	-	TSC_hg19_v1_chr10_-_99052389 AK090447 AK303055	58017	-	TSC_hg19_v1_chr10_-_99052395 AY336750 DQ338460 BX648189 BC113888 BC114490 CR749412	58052	-	BX648194 NM_001204300 NM_032900 TSC_hg19_v1_chr10_-_99052429	58082	-	AB017167|SLIT1|6585|slit homolog 1 (Drosophila)##BC028105|SLIT1|6585|slit homolog 1 (Drosophila)##AB011537|SLIT1|6585|slit homolog 1 (Drosophila)##BC146761|SLIT1|6585|slit homolog 1 (Drosophila)##NM_003061|SLIT1|6585|slit homolog 1 (Drosophila)##BC139909|SLIT1|6585|slit homolog 1 (Drosophila)##BC146851|SLIT1|6585|slit homolog 1 (Drosophila)##AY029183|SLIT1|6585|slit homolog 1 (Drosophila)##AK090447|ARHGAP19|84986|Rho GTPase activating protein 19##AK303055|ARHGAP19|84986|Rho GTPase activating protein 19##AY336750|ARHGAP19-SLIT1|100533184|ARHGAP19-SLIT1 readthrough##DQ338460|ARHGAP19|84986|Rho GTPase activating protein 19##BX648189|ARHGAP19|84986|Rho GTPase activating protein 19##BC113888|ARHGAP19|84986|Rho GTPase activating protein 19##BC114490|ARHGAP19|84986|Rho GTPase activating protein 19##CR749412|ARHGAP19|84986|Rho GTPase activating protein 19##BX648194|ARHGAP19|84986|Rho GTPase activating protein 19##NM_001204300|ARHGAP19|84986|Rho GTPase activating protein 19##NM_032900|ARHGAP19|84986|Rho GTPase activating protein 19	0.990476	CTCF.p2:-2:0.229	CTCF.p2:-3:0.762
chr1	16905716	16905841	reg1031712.p1	5.014	+	BC028053 TSC_hg19_v1_chr1_-_16825680	-80127	-	TSC_hg19_v1_chr1_+_16767236 BC017014 AK001282 AB463921 AK024468 AM393342	-138533	+	AK223344 TSC_hg19_v1_chr1_+_16767218 AK300764 AK302227 AK023545 BC018914	-138553	+	TSC_hg19_v1_chr1_-_16940046 AK123260 AY894575 NM_017940 BC066930 BC010124 BC082236 BC110431 AK055895 BC093404	34118	-	TSC_hg19_v1_chr1_-_16971175 AK090414	65388	-	AK123337 TSC_hg19_v1_chr1_-_16971178	65399	-	BC017014|NECAP2|55707|NECAP endocytosis associated 2##AK001282|NECAP2|55707|NECAP endocytosis associated 2##AK024468|NECAP2|55707|NECAP endocytosis associated 2##AM393342|NECAP2|55707|NECAP endocytosis associated 2##AK223344|NECAP2|55707|NECAP endocytosis associated 2##AK300764|NECAP2|55707|NECAP endocytosis associated 2##AK302227|NECAP2|55707|NECAP endocytosis associated 2##AK023545|NECAP2|55707|NECAP endocytosis associated 2##BC018914|NECAP2|55707|NECAP endocytosis associated 2##AK123260|NBPF1|55672|neuroblastoma breakpoint family, member 1##AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_017940|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC066930|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC010124|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC110431|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK055895|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC093404|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2##AK123337|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2	0.0	
chr3	12088032	12088105	reg1043785.p1	5.014	+	TSC_hg19_v1_chr3_+_12045861 NM_003178 NM_133625 AK094464 BC051307 AB209088 U40215 AF077671 AF077737	-42165	+	EU832515 EU832596 AK295839 TSC_hg19_v1_chr3_-_11888358 AK310993 BC015088 NM_138807 AK092776 AX747723 AK309733 AK303598	-199809	-	TSC_hg19_v1_chr3_-_11762012 D50911 BC001514 AK130542 BC000763 BC003038 NM_014667	-325953	-	BT019627 CU679743 DQ891795 DQ894978 U76456 TSC_hg19_v1_chr3_-_12200413 AK313018	112311	-	BC010553 NM_003256	112782	-	TSC_hg19_v1_chr3_+_12329422 NM_005037 NM_138712 X90563 AK290581	241388	+	NM_003178|SYN2|6854|synapsin II##NM_133625|SYN2|6854|synapsin II##AK094464|SYN2|6854|synapsin II##BC051307|SYN2|6854|synapsin II##AB209088|SYN2|6854|synapsin II##U40215|SYN2|6854|synapsin II##AF077671|SYN2|6854|synapsin II##AF077737|SYN2|6854|synapsin II##EU832515|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##EU832596|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK295839|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK310993|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##BC015088|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_138807|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK092776|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK309733|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK303598|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##D50911|VGLL4|9686|vestigial like 4 (Drosophila)##BC001514|VGLL4|9686|vestigial like 4 (Drosophila)##AK130542|VGLL4|9686|vestigial like 4 (Drosophila)##BC000763|VGLL4|9686|vestigial like 4 (Drosophila)##BC003038|VGLL4|9686|vestigial like 4 (Drosophila)##NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)##BT019627|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ891795|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ894978|TIMP4|7079|TIMP metallopeptidase inhibitor 4##U76456|TIMP4|7079|TIMP metallopeptidase inhibitor 4##AK313018|TIMP4|7079|TIMP metallopeptidase inhibitor 4##BC010553|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_003256|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_005037|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138712|PPARG|5468|peroxisome proliferator-activated receptor gamma##X90563|PPARG|5468|peroxisome proliferator-activated receptor gamma##AK290581|PPARG|5468|peroxisome proliferator-activated receptor gamma	0.998405	CTCF.p2:32:0.998
chr3	47412744	47412840	reg1026312.p1	5.014	+	NM_025010 TSC_hg19_v1_chr3_+_47324433 AK023765 AK291477 AK295292 BX537953 BC015962 AB527175 AM393269 AM393767 BC032620	-88364	+	BC015311 NM_001134878 NM_022342 NM_182902	-88497	-	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	-207353	-	AB040904 NM_015466 TSC_hg19_v1_chr3_+_47422510 AK055157 AK299906 AK295888 AK289502 AB025194 AF290614 AK295877 BC089042	9740	+	TSC_hg19_v1_chr3_-_47517349 AK300311	104545	-	TSC_hg19_v1_chr3_-_47517417 AK291484 D83782 NM_012235	104640	-	NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)##AK023765|KLHL18|23276|kelch-like 18 (Drosophila)##AK291477|KLHL18|23276|kelch-like 18 (Drosophila)##AK295292|KLHL18|23276|kelch-like 18 (Drosophila)##BX537953|KLHL18|23276|kelch-like 18 (Drosophila)##BC015962|KLHL18|23276|kelch-like 18 (Drosophila)##AM393269|KLHL18|23276|kelch-like 18 (Drosophila)##AM393767|KLHL18|23276|kelch-like 18 (Drosophila)##BC032620|KLHL18|23276|kelch-like 18 (Drosophila)##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9##AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2##AB040904|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_015466|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK055157|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK299906|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295888|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK289502|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AB025194|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AF290614|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295877|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##BC089042|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK300311|SCAP|22937|SREBF chaperone##AK291484|SCAP|22937|SREBF chaperone##D83782|SCAP|22937|SREBF chaperone##NM_012235|SCAP|22937|SREBF chaperone	0.999928	CTCF.p2:59:1.000
chr5	52726596	52726733	reg1028756.p2	5.014	+	TSC_hg19_v1_chr5_-_52405588 BC029287 AF091871 AF117815 AK312887 NM_176806 BC095417	-321068	-	BC046097 AF155659 NM_004531	-321359	-	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	-441544	+	NM_006350 NM_013409 TSC_hg19_v1_chr5_+_52776278	49613	+	TSC_hg19_v1_chr5_+_52776409 BC004107	49748	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	49886	+	BC029287|MOCS2|4338|molybdenum cofactor synthesis 2##AF091871|MOCS2|4338|molybdenum cofactor synthesis 2##AF117815|MOCS2|4338|molybdenum cofactor synthesis 2##AK312887|MOCS2|4338|molybdenum cofactor synthesis 2##NM_176806|MOCS2|4338|molybdenum cofactor synthesis 2##BC095417|MOCS2|4338|molybdenum cofactor synthesis 2##BC046097|MOCS2|4338|molybdenum cofactor synthesis 2##AF155659|MOCS2|4338|molybdenum cofactor synthesis 2##NM_004531|MOCS2|4338|molybdenum cofactor synthesis 2##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##NM_006350|FST|10468|follistatin##NM_013409|FST|10468|follistatin##BC004107|FST|10468|follistatin##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin	1.017368	CTCF.p2:6:0.958
chr6	41499710	41499840	reg1027902.p1	5.014	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-196209	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-245351	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-303707	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	14384	+	TSC_hg19_v1_chr6_+_41514342 BC052803	14562	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	106447	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	0.0	
chr6	53016590	53016731	reg1029139.p1	5.014	+	BC096288 BC096289 AK309881 NM_003643 D88613	-3057	-	AF176704 NM_012347	-80890	+	TSC_hg19_v1_chr6_+_52930242 AF155114 AL137520 NM_033480	-86339	+	AK125098 TSC_hg19_v1_chr6_-_53213676	196979	-	TSC_hg19_v1_chr6_-_53213736 AB209798 AL136939 BC074503 BC067123	197061	-	AK299674 AK302948 TSC_hg19_v1_chr6_-_53213749 AF338241 NM_001242828 NM_001242830 NM_001242831 NM_021814	197201	-	BC096288|GCM1|8521|glial cells missing homolog 1 (Drosophila)##BC096289|GCM1|8521|glial cells missing homolog 1 (Drosophila)##AK309881|GCM1|8521|glial cells missing homolog 1 (Drosophila)##NM_003643|GCM1|8521|glial cells missing homolog 1 (Drosophila)##D88613|GCM1|8521|glial cells missing homolog 1 (Drosophila)##AF176704|FBXO9|26268|F-box protein 9##NM_012347|FBXO9|26268|F-box protein 9##AL137520|FBXO9|26268|F-box protein 9##NM_033480|FBXO9|26268|F-box protein 9##AK125098|ELOVL5|60481|ELOVL fatty acid elongase 5##AB209798|ELOVL5|60481|ELOVL fatty acid elongase 5##AL136939|ELOVL5|60481|ELOVL fatty acid elongase 5##BC074503|ELOVL5|60481|ELOVL fatty acid elongase 5##BC067123|ELOVL5|60481|ELOVL fatty acid elongase 5##AK299674|ELOVL5|60481|ELOVL fatty acid elongase 5##AK302948|ELOVL5|60481|ELOVL fatty acid elongase 5##AF338241|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242828|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242830|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242831|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_021814|ELOVL5|60481|ELOVL fatty acid elongase 5	0.664475	CTCF.p2:-2:0.664
chr2	47748482	47748617	reg1026687.p1	5.013	+	TSC_hg19_v1_chr2_+_47630294 AK223284 AK296831 AK297763 BX649122 BC021566 AK311330 DQ892558 DQ895772 AB489153 BC001122 U03911 CU692370 DQ648894	-118232	+	TSC_hg19_v1_chr2_+_47630289 BC012599 NM_000251 U04045 AK222860 L47574 L47575 L47576 L47577 L47578 L47579 L47580 L47581 L47582 L47583	-118281	+	TSC_hg19_v1_chr2_+_47630218 AK304496	-118345	+	AF287302 NM_022055 BC047749	48934	-	TSC_hg19_v1_chr2_-_47918421 D28393	169870	-	BC071594 NM_000179 TSC_hg19_v1_chr2_+_48010283 U28946 D89646 BC104665 U54777 BC004246 AK293921 AK308392 AB590153 DQ892898	261747	+	AK223284|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK296831|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK297763|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BX649122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC021566|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK311330|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ892558|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ895772|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC001122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U03911|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ648894|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC012599|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##NM_000251|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U04045|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK222860|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47574|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47575|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47576|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47577|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47578|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47579|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47580|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47581|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47582|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47583|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AF287302|KCNK12|56660|potassium channel, subfamily K, member 12##NM_022055|KCNK12|56660|potassium channel, subfamily K, member 12##BC047749|KCNK12|56660|potassium channel, subfamily K, member 12##D28393|RPL18A|6142|ribosomal protein L18a##BC071594|MSH6|2956|mutS homolog 6 (E. coli)##NM_000179|MSH6|2956|mutS homolog 6 (E. coli)##U28946|MSH6|2956|mutS homolog 6 (E. coli)##D89646|MSH6|2956|mutS homolog 6 (E. coli)##BC104665|MSH6|2956|mutS homolog 6 (E. coli)##U54777|MSH6|2956|mutS homolog 6 (E. coli)##BC004246|MSH6|2956|mutS homolog 6 (E. coli)##AK293921|MSH6|2956|mutS homolog 6 (E. coli)##AK308392|MSH6|2956|mutS homolog 6 (E. coli)##DQ892898|MSH6|2956|mutS homolog 6 (E. coli)	0.0	
chr5	107007727	107007907	reg1030924.p2	5.013	+	AK308672 NM_001962 U26403	-1227	-	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-4109336	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4413360	+	TSC_hg19_v1_chr5_-_107717106 AK126722	709313	-	BC063316 NM_001163315	709981	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	1056163	-	AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AB593118|HP07349|100652853|uncharacterized protein HP07349	0.0	
chr8	126444198	126444327	reg1006591.p1	5.013	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-1683	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-340165	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-340205	-	TSC_hg19_v1_chr8_-_126963395 BX648371	519151	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	1126293	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	1126462	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.0	
chrX	135654349	135654503	reg1025992.p1	5.013	+	BC000045 NM_016267 AK309912 BC003362 AF137387	-40059	+	BC009896 NM_014500 TSC_hg19_v1_chrX_+_135579729 AK299403 AK225870 U76992 CU679521 EU176345 BT006886	-74670	+	AB209303 NM_001163280 TSC_hg19_v1_chrX_+_135579394	-75109	+	BC071754 NM_000074 AK292637 X68550 X67878 L07414 BC074950 X96710 Z15017 FN298241 CU687160 AB590912 AF529195 AY197739	75945	+	AK129909 TSC_hg19_v1_chrX_-_135749484	95040	-	AK294929 TSC_hg19_v1_chrX_-_135849503 AK295709 AK299861	195081	-	BC000045|VGLL1|51442|vestigial like 1 (Drosophila)##NM_016267|VGLL1|51442|vestigial like 1 (Drosophila)##AK309912|VGLL1|51442|vestigial like 1 (Drosophila)##BC003362|VGLL1|51442|vestigial like 1 (Drosophila)##AF137387|VGLL1|51442|vestigial like 1 (Drosophila)##BC009896|HTATSF1|27336|HIV-1 Tat specific factor 1##NM_014500|HTATSF1|27336|HIV-1 Tat specific factor 1##AK299403|HTATSF1|27336|HIV-1 Tat specific factor 1##AK225870|HTATSF1|27336|HIV-1 Tat specific factor 1##U76992|HTATSF1|27336|HIV-1 Tat specific factor 1##EU176345|HTATSF1|27336|HIV-1 Tat specific factor 1##BT006886|HTATSF1|27336|HIV-1 Tat specific factor 1##AB209303|HTATSF1|27336|HIV-1 Tat specific factor 1##NM_001163280|HTATSF1|27336|HIV-1 Tat specific factor 1##BC071754|CD40LG|959|CD40 ligand##NM_000074|CD40LG|959|CD40 ligand##AK292637|CD40LG|959|CD40 ligand##X68550|CD40LG|959|CD40 ligand##X67878|CD40LG|959|CD40 ligand##L07414|CD40LG|959|CD40 ligand##BC074950|CD40LG|959|CD40 ligand##Z15017|CD40LG|959|CD40 ligand##FN298241|CD40LG|959|CD40 ligand##AF529195|CD40LG|959|CD40 ligand##AY197739|CD40LG|959|CD40 ligand##AK129909|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK294929|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK295709|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK299861|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	0.913319	CTCF.p2:-38:0.913
chr1	45859752	45859864	reg1028467.p1	5.012	+	TSC_hg19_v1_chr1_+_45805883 AK298162 AK093320 BC009364 CU679325 CR457320	-53908	+	AB032924 AB032925 AB032926 AB025227 NM_001048174 AB032927 AB032928 AB032929 NM_001048172 NM_001048173 CU678424 AB590565 AB032920 AB032921 AB032922 AB032923 BC003178 AK293830 NM_001048171 NM_001128425 NM_012222	-53935	-	TSC_hg19_v1_chr1_+_45805845 AK024011	-53979	+	TSC_hg19_v1_chr1_-_45956836 BX648441 AK027573 AK294172 BC022194 AB057597 AJ132545 AK299269 NM_007170 AK302494	97025	-	AK098537 NM_015506 TSC_hg19_v1_chr1_+_45965990 AL080062 BC006122	106131	+	X67951 L19184 TSC_hg19_v1_chr1_-_45987557 AK311898 BC007063 AK131049 BC021683 NM_002574 NM_181696 NM_181697	127770	-	AK298162|TOE1|114034|target of EGR1, member 1 (nuclear)##AK093320|TOE1|114034|target of EGR1, member 1 (nuclear)##BC009364|TOE1|114034|target of EGR1, member 1 (nuclear)##CR457320|TOE1|114034|target of EGR1, member 1 (nuclear)##AB032924|MUTYH|4595|mutY homolog (E. coli)##AB032925|MUTYH|4595|mutY homolog (E. coli)##AB032926|MUTYH|4595|mutY homolog (E. coli)##AB025227|MUTYH|4595|mutY homolog (E. coli)##NM_001048174|MUTYH|4595|mutY homolog (E. coli)##AB032927|MUTYH|4595|mutY homolog (E. coli)##AB032928|MUTYH|4595|mutY homolog (E. coli)##AB032929|MUTYH|4595|mutY homolog (E. coli)##NM_001048172|MUTYH|4595|mutY homolog (E. coli)##NM_001048173|MUTYH|4595|mutY homolog (E. coli)##AB032920|MUTYH|4595|mutY homolog (E. coli)##AB032921|MUTYH|4595|mutY homolog (E. coli)##AB032922|MUTYH|4595|mutY homolog (E. coli)##AB032923|MUTYH|4595|mutY homolog (E. coli)##BC003178|MUTYH|4595|mutY homolog (E. coli)##AK293830|MUTYH|4595|mutY homolog (E. coli)##NM_001048171|MUTYH|4595|mutY homolog (E. coli)##NM_001128425|MUTYH|4595|mutY homolog (E. coli)##NM_012222|MUTYH|4595|mutY homolog (E. coli)##AK024011|TOE1|114034|target of EGR1, member 1 (nuclear)##BX648441|TESK2|10420|testis-specific kinase 2##AK027573|TESK2|10420|testis-specific kinase 2##AK294172|TESK2|10420|testis-specific kinase 2##BC022194|TESK2|10420|testis-specific kinase 2##AB057597|TESK2|10420|testis-specific kinase 2##AJ132545|TESK2|10420|testis-specific kinase 2##AK299269|TESK2|10420|testis-specific kinase 2##NM_007170|TESK2|10420|testis-specific kinase 2##AK302494|TESK2|10420|testis-specific kinase 2##AK098537|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##NM_015506|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##AL080062|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BC006122|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##X67951|PRDX1|5052|peroxiredoxin 1##L19184|PRDX1|5052|peroxiredoxin 1##AK311898|PRDX1|5052|peroxiredoxin 1##BC007063|PRDX1|5052|peroxiredoxin 1##AK131049|PRDX1|5052|peroxiredoxin 1##BC021683|PRDX1|5052|peroxiredoxin 1##NM_002574|PRDX1|5052|peroxiredoxin 1##NM_181696|PRDX1|5052|peroxiredoxin 1##NM_181697|PRDX1|5052|peroxiredoxin 1	0.0	
chr14	68699415	68699588	reg1024541.p2	5.012	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-412981	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-416202	-	AK315462 NM_152443	-530899	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	560219	-	NM_001244698 NM_004926	561129	-	NM_001244701 AB528867	563483	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr9	113637795	113637914	reg1023774.p2	5.012	+	NM_001166280 NM_001166281 NM_005592 AF006464 BC109098 BC109099 EU832778 EU832779 GQ129313	-206738	+	TSC_hg19_v1_chr9_-_113342011 AJ619977 AY243503 AK122605 BC030816 NM_153366	-295790	-	HQ258720 AF305830 BC130549 BC130551 BC144461 BC035743 NM_001003936	-537754	-	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	162558	-	AK298590 TSC_hg19_v1_chr9_-_113801086	163179	-	TSC_hg19_v1_chr9_-_113801481 AK290287	163648	-	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1##AK298590|LPAR1|1902|lysophosphatidic acid receptor 1##AK290287|LPAR1|1902|lysophosphatidic acid receptor 1	0.494934	CTCF.p2:-21:0.495
chr12	129308616	129308796	reg1028367.p1	5.011	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	-263	-	NM_001136103	-556759	+	NM_052907	-3497545	+	BC043528 TSC_hg19_v1_chr12_+_129337985	29278	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	29381	+	BC114626 BC114936 NM_133448 AB061814	1079505	-	BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D	0.0	
chr14	66868342	66868439	reg1025387.p1	5.011	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-988665	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-988902	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-989064	-	AB037806 AF272663 NM_001024218 NM_020806	105734	+	TSC_hg19_v1_chr14_+_66974859 AK025169	106463	+	TSC_hg19_v1_chr14_+_66974870 AK315569	106479	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.791881	CTCF.p2:-28:0.792
chr22	23270983	23271160	reg1023507.p1	5.011	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	-40988	+	TSC_hg19_v1_chr22_+_23222900 AK127411 S77601 X57802 X57803 X57816 X57818 AB369252 AF026919 AF026925 AY190825 L26400 AF490955 AF490961	-48142	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	-57378	+	TSC_hg19_v1_chr22_+_23412527 BC037333 BC026342 NM_002073	141445	+	AK312519 TSC_hg19_v1_chr22_+_23412728 AK293653	141658	+	BC008986 AF133587 NM_014433 AK299530 AK310327	213172	-	AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AB369252|CYAT1|100290481|immunoglobulin lambda light chain-like##BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3##BC037333|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC026342|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##NM_002073|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK312519|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK293653|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1##AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1##NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1	0.0	
chr2	224810112	224810223	reg1028720.p2	5.011	+	TSC_hg19_v1_chr2_-_224810053 BC065934 NM_020830 AJ310568	-102	-	TSC_hg19_v1_chr2_-_224810031 BC021065	-135	-	TSC_hg19_v1_chr2_-_224810020 AK023415 AK022888	-143	-	TSC_hg19_v1_chr2_+_224822174 NM_022915 AK022763 BC012058 AK024052 CR457293 CU680184	11986	+	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	56461	-	AK295564 NM_001136530	93173	-	BC065934|WDFY1|57590|WD repeat and FYVE domain containing 1##NM_020830|WDFY1|57590|WD repeat and FYVE domain containing 1##AJ310568|WDFY1|57590|WD repeat and FYVE domain containing 1##AK023415|WDFY1|57590|WD repeat and FYVE domain containing 1##AK022888|WDFY1|57590|WD repeat and FYVE domain containing 1##NM_022915|MRPL44|65080|mitochondrial ribosomal protein L44##AK022763|MRPL44|65080|mitochondrial ribosomal protein L44##BC012058|MRPL44|65080|mitochondrial ribosomal protein L44##AK024052|MRPL44|65080|mitochondrial ribosomal protein L44##CR457293|MRPL44|65080|mitochondrial ribosomal protein L44##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	0.0	
chr7	20687922	20688034	reg1026032.p1	5.011	+	AY851364 BC110370 NM_001163942 NM_001163993 NM_178559 BC044248 AY090613 AY234788 AY851365 BC104894 BC104920	-887	+	AB353947 NM_001163941 AY230001	-32681	+	BC002630 NM_002214 M73780	-317244	+	TSC_hg19_v1_chr7_-_20825382 AB464710	137404	-	TSC_hg19_v1_chr7_-_20826429 AK299947	138450	-	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	138556	-	AY851364|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC110370|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163942|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163993|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_178559|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC044248|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY090613|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY234788|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY851365|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC104894|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC104920|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AB353947|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163941|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY230001|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8##AK299947|SP8|221833|Sp8 transcription factor##AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor	0.958788	CTCF.p2:10:0.959
chr11	120783387	120783528	reg1024024.p1	5.010	+	AB384776 NM_014619 S67803	-252430	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-400992	+	BC063117 NM_001198665 NM_015313	-575840	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	111353	+	NM_005422	189917	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	379948	+	NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.0	
chr11	57430436	57430560	reg1026843.p1	5.010	+	NM_001142597 NM_006831 TSC_hg19_v1_chr11_+_57425244 AK313007 AK300232 BC000446	-5268	+	BC029228 BC104781 BC112119 BC064995 AB098738 AK054775 AK124577 NM_145008	-13167	-	TSC_hg19_v1_chr11_-_57414981 BC111012	-15485	-	TSC_hg19_v1_chr11_+_57435327 AY894889	4873	+	TSC_hg19_v1_chr11_+_57435463 NM_015457 AB051535	4977	+	BC026967 TSC_hg19_v1_chr11_+_57435567	5070	+	NM_001142597|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##NM_006831|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##AK313007|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##AK300232|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##BC000446|CLP1|10978|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)##BC029228|YPEL4|219539|yippee-like 4 (Drosophila)##BC104781|YPEL4|219539|yippee-like 4 (Drosophila)##BC112119|YPEL4|219539|yippee-like 4 (Drosophila)##BC064995|YPEL4|219539|yippee-like 4 (Drosophila)##AB098738|YPEL4|219539|yippee-like 4 (Drosophila)##AK054775|YPEL4|219539|yippee-like 4 (Drosophila)##AK124577|YPEL4|219539|yippee-like 4 (Drosophila)##NM_145008|YPEL4|219539|yippee-like 4 (Drosophila)##BC111012|YPEL4|219539|yippee-like 4 (Drosophila)##AY894889|ZDHHC5|25921|zinc finger, DHHC-type containing 5##NM_015457|ZDHHC5|25921|zinc finger, DHHC-type containing 5##AB051535|ZDHHC5|25921|zinc finger, DHHC-type containing 5##BC026967|ZDHHC5|25921|zinc finger, DHHC-type containing 5	0.024855	
chr12	123350326	123350444	reg1025864.p2	5.010	+	TSC_hg19_v1_chr12_+_123320050 AK298387 BC067085 NM_003959 AB014555	-30332	+	TSC_hg19_v1_chr12_+_123319294 AK090537	-31083	+	NM_201435 TSC_hg19_v1_chr12_+_123259079 BC060796 AY254201 AK097663 AK292466	-91284	+	CU675175 TSC_hg19_v1_chr12_-_123380621	30230	-	TSC_hg19_v1_chr12_-_123380645 BC005882	30254	-	TSC_hg19_v1_chr12_-_123380691 AK022812 NM_024667	30311	-	AK298387|HIP1R|9026|huntingtin interacting protein 1 related##BC067085|HIP1R|9026|huntingtin interacting protein 1 related##NM_003959|HIP1R|9026|huntingtin interacting protein 1 related##AB014555|HIP1R|9026|huntingtin interacting protein 1 related##AK090537|HIP1R|9026|huntingtin interacting protein 1 related##NM_201435|CCDC62|84660|coiled-coil domain containing 62##BC060796|CCDC62|84660|coiled-coil domain containing 62##AY254201|CCDC62|84660|coiled-coil domain containing 62##AK097663|CCDC62|84660|coiled-coil domain containing 62##AK292466|CCDC62|84660|coiled-coil domain containing 62##BC005882|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)##AK022812|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)##NM_024667|VPS37B|79720|vacuolar protein sorting 37 homolog B (S. cerevisiae)	0.997451	CTCF.p2:9:0.997
chr12	96794244	96794338	reg1021940.p1	5.010	+	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	-308	-	TSC_hg19_v1_chr12_+_96588254 BC017371	-206024	+	TSC_hg19_v1_chr12_+_96588154 NM_005230 Z36715 AK312694	-206165	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	26	-	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	506740	+	BC027605 NM_001135175	506952	+	X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##NM_005230|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##Z36715|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK312694|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1	0.30042	CTCF.p2:79:0.300
chr14	100613012	100613124	reg1029447.p1	5.010	+	AF131766 TSC_hg19_v1_chr14_+_100563847	-49235	+	TSC_hg19_v1_chr14_+_100531768 AF087843 BC032358 AF052504	-81273	+	TSC_hg19_v1_chr14_+_100531758 NM_016337 AK301379	-81316	+	AY541700 BC063598 TSC_hg19_v1_chr14_-_100626009 NM_206918	12903	-	NM_003403 TSC_hg19_v1_chr14_+_100705177	92074	+	TSC_hg19_v1_chr14_+_100705309 M77698	92244	+	AF131766|EVL|51466|Enah/Vasp-like##AF087843|EVL|51466|Enah/Vasp-like##BC032358|EVL|51466|Enah/Vasp-like##AF052504|EVL|51466|Enah/Vasp-like##NM_016337|EVL|51466|Enah/Vasp-like##AK301379|EVL|51466|Enah/Vasp-like##AY541700|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##BC063598|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##NM_206918|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##NM_003403|YY1|7528|YY1 transcription factor##M77698|YY1|7528|YY1 transcription factor	0.95924	CTCF.p2:15:0.944
chr15	72077195	72077302	reg1027316.p2	5.010	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	-237668	+	NM_024817 BC140868	-643438	+	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	-669377	-	AF121129 NM_014249 NM_016346 AF148128	25664	+	AK097557 NM_001166340	329350	+	NM_001172109 NM_001172110	331970	+	AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172109|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172110|SENP8|123228|SUMO/sentrin specific peptidase family member 8	0.976043	CTCF.p2:-1:0.976
chr4	154387537	154387674	reg1026692.p2	5.010	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-113	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-121730	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-121818	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	217793	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	217825	+	TSC_hg19_v1_chr4_+_154605441 BC033756	217859	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.0	
chr6	15962282	15962463	reg1024764.p1	5.010	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-299082	-	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	-299195	-	TSC_hg19_v1_chr6_+_15249113 AK303610	-713259	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	166930	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	167065	+	TSC_hg19_v1_chr6_+_16143281 AK026739	180938	+	NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein	0.0	
chr8	64134915	64135056	reg1028836.p2	5.010	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-53785	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-53841	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-136358	-	NM_152414 AK293979	1357873	+	TSC_hg19_v1_chr8_+_65493611 AK091333	1358679	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	1576294	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.904099	CTCF.p2:-10:0.904
chr11	133259012	133259118	reg1023510.p1	5.009	+	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-445460	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-446051	-	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1477726	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	143249	-	AF521713 AK098717 NM_174927 BC058039	456316	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	567817	-	AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B	0.0	
chr13	81635485	81635649	reg1029884.p1	5.009	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-720503	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-722525	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-1580012	+	TSC_hg19_v1_chr13_-_84456424 BC051738	2820858	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	2820933	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	4737872	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.956145	CTCF.p2:-20:0.956
chr14	82458425	82458570	reg1029644.p1	5.009	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-458270	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-458349	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-593671	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	3537976	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	3538044	+	TSC_hg19_v1_chr14_+_85999692 AK297248	3541088	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.014224	
chr19	30414726	30414818	reg1029405.p1	5.009	+	BC026184 NM_001252641	-222	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	-111871	+	TSC_hg19_v1_chr19_-_30206402 NM_031448	-208350	-	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	18510	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	448608	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	1425575	-	BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3	0.0	
chr2	45878243	45878324	reg1020585.p2	5.009	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-39876	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-83155	-	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	-641733	-	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	791	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	646308	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	646692	+	AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1	0.0	
chr6	160399638	160399818	reg1026792.p1	5.009	+	TSC_hg19_v1_chr6_+_160390137 NM_000876 Y00285 J03528	-9595	+	BC069142 BC069581 BC110454 NM_002377 CU686912 CR542261	-71749	+	TSC_hg19_v1_chr6_+_160221313 AK097559 NM_173516 AK093139 AX747947 BC112246	-178385	+	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	143186	+	CU689064 BC039899 AK290787 X98333 AB075951 BC030978 NM_003058	280147	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	369666	+	NM_000876|IGF2R|3482|insulin-like growth factor 2 receptor##Y00285|IGF2R|3482|insulin-like growth factor 2 receptor##J03528|IGF2R|3482|insulin-like growth factor 2 receptor##BC069142|MAS1|4142|MAS1 oncogene##BC069581|MAS1|4142|MAS1 oncogene##BC110454|MAS1|4142|MAS1 oncogene##NM_002377|MAS1|4142|MAS1 oncogene##CR542261|MAS1|4142|MAS1 oncogene##AK097559|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_173516|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##AK093139|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##BC112246|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC039899|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AK290787|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##X98333|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AB075951|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC030978|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003058|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3	0.0	
chr8	127579250	127579330	reg1027876.p2	5.009	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-8566	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-8735	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-615877	-	DQ486513 NM_001159542	848566	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	1169035	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	1169200	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.99433	CTCF.p2:27:0.994
chr13	19237506	19237613	reg1026723.p1	5.008	+	None	None	None	None	None	None	None	None	None	BC011721 NM_006001	518403	-	BC128146 BC128147 AJ421032 AY219890 NM_001141968 NM_130785 NM_199254	873334	-	TSC_hg19_v1_chr13_+_20207808 AK300258 NM_017520 BC017322 AK092556 AX747597 AL832864 BC003542	970276	+	BC011721|TUBA3C|7278|tubulin, alpha 3c##NM_006001|TUBA3C|7278|tubulin, alpha 3c##BC128146|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##BC128147|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AJ421032|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AY219890|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_001141968|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_130785|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_199254|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AK300258|MPHOSPH8|54737|M-phase phosphoprotein 8##NM_017520|MPHOSPH8|54737|M-phase phosphoprotein 8##BC017322|MPHOSPH8|54737|M-phase phosphoprotein 8##AK092556|MPHOSPH8|54737|M-phase phosphoprotein 8##AL832864|MPHOSPH8|54737|M-phase phosphoprotein 8##BC003542|MPHOSPH8|54737|M-phase phosphoprotein 8	0.67052	CTCF.p2:1:0.671
chr14	77591437	77591526	reg1025865.p3	5.008	+	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	-26836	+	AK124327 TSC_hg19_v1_chr14_-_77542533	-48948	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-96421	-	BC117676 TSC_hg19_v1_chr14_-_77608072	16534	-	AK294840 TSC_hg19_v1_chr14_-_77608135 AK095612 NM_174976	16654	-	TSC_hg19_v1_chr14_+_77648082 NM_020431	56611	+	NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK294840|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK095612|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_174976|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_020431|TMEM63C|57156|transmembrane protein 63C	0.826509	CTCF.p2:-22:0.827
chr19	35896254	35896434	reg1025476.p1	5.008	+	AK290710 NM_005304 BC035657	-46850	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	-53894	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	-76253	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	44273	+	AM392574 AM392667 AM392672 AM392738 AM392847 AM392851 AM393397 AM393477 AY359007 HQ258707 BC130501 NM_001244847 NM_207392	85044	-	AY622964 AY789707 AF086315 AL832080 NM_001035516	96461	-	AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule##AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2##AM392574|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392667|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392672|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392738|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392847|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392851|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393397|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393477|KRTDAP|388533|keratinocyte differentiation-associated protein##AY359007|KRTDAP|388533|keratinocyte differentiation-associated protein##HQ258707|KRTDAP|388533|keratinocyte differentiation-associated protein##BC130501|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_001244847|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_207392|KRTDAP|388533|keratinocyte differentiation-associated protein##AY622964|DMKN|93099|dermokine##AY789707|DMKN|93099|dermokine##AF086315|DMKN|93099|dermokine##AL832080|DMKN|93099|dermokine##NM_001035516|DMKN|93099|dermokine	0.0	
chr12	108306241	108306338	reg1017221.p1	5.007	+	AY238895 NM_203436	-138128	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-151288	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	-151379	-	BC110330 AB018332 NM_014653	217198	+	NM_001142345	408149	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	426795	-	AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1	0.968401	CTCF.p2:-7:0.968
chr1	44703945	44704067	reg1032800.p1	5.007	+	TSC_hg19_v1_chr1_+_44679145 NM_001034023 NM_001034024 NM_019100 AL136657 AK300372 BC002855 AK300442 AK293598 AK021605 AK289366 AK298793 AB037846 AL137200 BC008053 AK300217	-24863	+	BC049844 NM_173484 AK097479 BC035408 CU690622	-119457	+	TSC_hg19_v1_chr1_-_44497141 AK315933 NM_001024845	-206867	-	AB528814 TSC_hg19_v1_chr1_-_44820904 AF007157	116802	-	AK308597 TSC_hg19_v1_chr1_-_44820929 BC144384	116920	-	TSC_hg19_v1_chr1_-_44820938 AK290567 NM_024066	116930	-	NM_001034023|DMAP1|55929|DNA methyltransferase 1 associated protein 1##NM_001034024|DMAP1|55929|DNA methyltransferase 1 associated protein 1##NM_019100|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AL136657|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300372|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC002855|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300442|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK293598|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK021605|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK289366|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK298793|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AB037846|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AL137200|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC008053|DMAP1|55929|DNA methyltransferase 1 associated protein 1##AK300217|DMAP1|55929|DNA methyltransferase 1 associated protein 1##BC049844|KLF17|128209|Kruppel-like factor 17##NM_173484|KLF17|128209|Kruppel-like factor 17##AK097479|KLF17|128209|Kruppel-like factor 17##BC035408|KLF17|128209|Kruppel-like factor 17##AK315933|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_001024845|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AF007157|ERI3|79033|ERI1 exoribonuclease family member 3##BC144384|ERI3|79033|ERI1 exoribonuclease family member 3##AK290567|ERI3|79033|ERI1 exoribonuclease family member 3##NM_024066|ERI3|79033|ERI1 exoribonuclease family member 3	0.071673	
chr20	19026134	19026314	reg1030229.p2	5.007	+	NM_001242671	-215386	-	AF418568 AF418570 AX721297 NM_178483 AK130970 AY248902 BC105121 BC112024	-231826	+	TSC_hg19_v1_chr20_+_18568661 NM_080820 BC045167 AK074304 BC100923 BC100924 BC100925 BC100926 AK291440 AF332356 CU692252	-457574	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	167061	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	167229	+	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	840919	+	NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AF418568|C20orf79|140856|chromosome 20 open reading frame 79##AF418570|C20orf79|140856|chromosome 20 open reading frame 79##NM_178483|C20orf79|140856|chromosome 20 open reading frame 79##AK130970|C20orf79|140856|chromosome 20 open reading frame 79##AY248902|C20orf79|140856|chromosome 20 open reading frame 79##BC105121|C20orf79|140856|chromosome 20 open reading frame 79##BC112024|C20orf79|140856|chromosome 20 open reading frame 79##NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2	0.504358	CTCF.p2:-77:0.504
chr2	45878139	45878231	reg1020585.p1	5.007	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-39778	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-83057	-	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	-641635	-	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	889	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	646406	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	646790	+	AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1	0.09993	
chr4	110580166	110580289	reg1028107.p2	5.007	+	TSC_hg19_v1_chr4_+_110481443 NM_017918 AK291098 BC002633 AK095936 AK311030	-98810	+	TSC_hg19_v1_chr4_+_110354993 BC040137 AK300278	-225052	+	BC117135 BC143268 BC143269 BC143276 TSC_hg19_v1_chr4_+_110354970 NM_001042734 NM_006323	-225279	+	AB590350 DQ894589 EU176306 U20537 TSC_hg19_v1_chr4_-_110624602 BC000305 BC004460 NM_001226 NM_032992 U20536	44364	-	DQ892725 DQ896860 CU677869 TSC_hg19_v1_chr4_-_110651216 AF306567 AF332892 AY359024 BC017218 AK075389 AK313081 NM_030821	70895	-	AB590959 CU676662 J02770 TSC_hg19_v1_chr4_-_110723176 AK290625 BC005275 Y00318 BC020718 AK299232	142939	-	NM_017918|CCDC109B|55013|coiled-coil domain containing 109B##AK291098|CCDC109B|55013|coiled-coil domain containing 109B##BC002633|CCDC109B|55013|coiled-coil domain containing 109B##AK095936|CCDC109B|55013|coiled-coil domain containing 109B##AK311030|CCDC109B|55013|coiled-coil domain containing 109B##BC040137|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##AK300278|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC117135|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143268|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143269|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143276|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_001042734|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_006323|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##DQ892725|PLA2G12A|81579|phospholipase A2, group XIIA##DQ896860|PLA2G12A|81579|phospholipase A2, group XIIA##AF306567|PLA2G12A|81579|phospholipase A2, group XIIA##AF332892|PLA2G12A|81579|phospholipase A2, group XIIA##AY359024|PLA2G12A|81579|phospholipase A2, group XIIA##BC017218|PLA2G12A|81579|phospholipase A2, group XIIA##AK075389|PLA2G12A|81579|phospholipase A2, group XIIA##AK313081|PLA2G12A|81579|phospholipase A2, group XIIA##NM_030821|PLA2G12A|81579|phospholipase A2, group XIIA##J02770|CFI|3426|complement factor I##AK290625|CFI|3426|complement factor I##BC005275|CFI|3426|complement factor I##Y00318|CFI|3426|complement factor I##BC020718|CFI|3426|complement factor I##AK299232|CFI|3426|complement factor I	0.96982	CTCF.p2:10:0.970
chr6	150336463	150336560	reg1029393.p1	5.007	+	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	-51349	+	AK299895 AB052906 NM_025217 TSC_hg19_v1_chr6_+_150263162 AX772820 BC034689 AY358665 AF304378 AY026825 CU689938	-73347	+	AY172580 BC096719 BC098152 AY172579 NM_001001788 AK310157	-92311	-	BC131600 AB528849 AY039682 NM_130900	10122	-	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	53702	-	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	127730	+	AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##AK299895|ULBP2|80328|UL16 binding protein 2##AB052906|ULBP2|80328|UL16 binding protein 2##NM_025217|ULBP2|80328|UL16 binding protein 2##AX772820|ULBP2|80328|UL16 binding protein 2##BC034689|ULBP2|80328|UL16 binding protein 2##AY358665|ULBP2|80328|UL16 binding protein 2##AF304378|ULBP2|80328|UL16 binding protein 2##AY026825|ULBP2|80328|UL16 binding protein 2##AY172580|RAET1G|353091|retinoic acid early transcript 1G##BC096719|RAET1G|353091|retinoic acid early transcript 1G##BC098152|RAET1G|353091|retinoic acid early transcript 1G##AY172579|RAET1G|353091|retinoic acid early transcript 1G##NM_001001788|RAET1G|353091|retinoic acid early transcript 1G##AK310157|RAET1G|353091|retinoic acid early transcript 1G##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L##AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C	0.0	
chr7	80057916	80058016	reg1028893.p2	5.007	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	-293827	+	TSC_hg19_v1_chr7_+_79083303 AK311103	-974809	+	AB014605 BC150277 AK297353 AF038563 NM_012301	-975087	-	NM_001102386 BC147016 BC147017	83316	-	NM_001001547 AK129899 AK300101 AK312920	173555	+	TSC_hg19_v1_chr7_+_80267800 NM_000072 NM_001001548	209840	+	NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_001102386|GNAT3|346562|guanine nucleotide binding protein, alpha transducing 3##BC147016|GNAT3|346562|guanine nucleotide binding protein, alpha transducing 3##BC147017|GNAT3|346562|guanine nucleotide binding protein, alpha transducing 3##NM_001001547|CD36|948|CD36 molecule (thrombospondin receptor)##AK129899|CD36|948|CD36 molecule (thrombospondin receptor)##AK300101|CD36|948|CD36 molecule (thrombospondin receptor)##AK312920|CD36|948|CD36 molecule (thrombospondin receptor)##NM_000072|CD36|948|CD36 molecule (thrombospondin receptor)##NM_001001548|CD36|948|CD36 molecule (thrombospondin receptor)	0.670665	CTCF.p2:-20:0.671
chr7	8008549	8008729	reg1026728.p3	5.007	+	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	-206	+	BC009868 NM_002947	-250402	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-328266	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	293077	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	293152	-	TSC_hg19_v1_chr7_-_8302174 U38260 L01100 BC008640 BC005922 NM_004968	293534	-	NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa##U38260|ICA1|3382|islet cell autoantigen 1, 69kDa##L01100|ICA1|3382|islet cell autoantigen 1, 69kDa##BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa##BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr16	80982890	80983017	reg1027326.p1	5.006	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	-144906	-	AF125108 NM_130897 BC054892 BC035232	-408065	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-1348338	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	57131	+	TSC_hg19_v1_chr16_+_81040132 BC007334	57190	+	TSC_hg19_v1_chr16_-_81040491 AF201935 BC032631 NM_020188	57517	-	AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N##BC007334|CENPN|55839|centromere protein N##AF201935|C16orf61|56942|chromosome 16 open reading frame 61##BC032631|C16orf61|56942|chromosome 16 open reading frame 61##NM_020188|C16orf61|56942|chromosome 16 open reading frame 61	0.994717	CTCF.p2:0:0.995
chr2	24244400	24244525	reg1028492.p2	5.006	+	NM_001080473	-11510	+	TSC_hg19_v1_chr2_+_24163332 BC092484 AL832079 NM_181713 BC111997 BC093681 BC143298	-81091	+	TSC_hg19_v1_chr2_+_24150144 BC037901	-94305	+	AK025598 TSC_hg19_v1_chr2_-_24270262 BC035698 NM_001142319 NM_025203	25796	-	NM_004116 NM_054033 BC050998 TSC_hg19_v1_chr2_+_24272612	28137	+	BC002614 TSC_hg19_v1_chr2_+_24272636 D38037 S69800 S69815 L37086 AF322070	28190	+	NM_001080473|MFSD2B|388931|major facilitator superfamily domain containing 2B##BC092484|UBXN2A|165324|UBX domain protein 2A##AL832079|UBXN2A|165324|UBX domain protein 2A##NM_181713|UBXN2A|165324|UBX domain protein 2A##BC111997|UBXN2A|165324|UBX domain protein 2A##BC093681|UBXN2A|165324|UBX domain protein 2A##BC143298|UBXN2A|165324|UBX domain protein 2A##BC037901|UBXN2A|165324|UBX domain protein 2A##AK025598|C2orf44|80304|chromosome 2 open reading frame 44##BC035698|C2orf44|80304|chromosome 2 open reading frame 44##NM_001142319|C2orf44|80304|chromosome 2 open reading frame 44##NM_025203|C2orf44|80304|chromosome 2 open reading frame 44##NM_004116|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##NM_054033|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##BC050998|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##BC002614|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##D38037|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##S69800|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##S69815|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##L37086|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa##AF322070|FKBP1B|2281|FK506 binding protein 1B, 12.6 kDa	0.168835	
chr3	180928152	180928294	reg1030660.p2	5.006	+	NM_001190233 TSC_hg19_v1_chr3_-_180707525 AK311765 BC073989 BC009702 AK309019 AK307097 NM_145261	-220790	-	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	-297745	+	TSC_hg19_v1_chr3_+_180630246 NM_001013438 NM_001013439 NM_005087	-298040	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	489169	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	501490	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	501915	+	NM_001190233|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK311765|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC073989|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC009702|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK307097|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##NM_145261|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013438|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013439|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_005087|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2	0.976627	CTCF.p2:-27:0.977
chr7	55323143	55323324	reg1003987.p2	5.006	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-236287	+	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	-236488	+	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	-496312	-	AK095857 NM_018697	109907	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	110339	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	316807	-	AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor##AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	0.0	
chr9	131465013	131465193	reg1015710.p2	5.006	+	TSC_hg19_v1_chr9_+_131465139 BC032794 BC041581 BC062558 EU831416 EU831509	-3	+	TSC_hg19_v1_chr9_+_131464821 BC023327 NM_013355	-260	+	AK300609 NM_001248001	-12850	+	CU690564 BC009280 BC048251 TSC_hg19_v1_chr9_-_131486407 AK027430 AK075332 AK315746 AK092843 AX747760 NM_032799	21286	-	TSC_hg19_v1_chr9_-_131534148 AK314911 BC033884	68914	-	TSC_hg19_v1_chr9_-_131534207 BC052563 NM_006336	69155	-	BC032794|PKN3|29941|protein kinase N3##BC041581|PKN3|29941|protein kinase N3##BC062558|PKN3|29941|protein kinase N3##EU831416|PKN3|29941|protein kinase N3##EU831509|PKN3|29941|protein kinase N3##BC023327|PKN3|29941|protein kinase N3##NM_013355|PKN3|29941|protein kinase N3##AK300609|SET|6418|SET nuclear oncogene##NM_001248001|SET|6418|SET nuclear oncogene##BC009280|ZDHHC12|84885|zinc finger, DHHC-type containing 12##BC048251|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK027430|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK075332|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK315746|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK092843|ZDHHC12|84885|zinc finger, DHHC-type containing 12##NM_032799|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK314911|ZER1|10444|zer-1 homolog (C. elegans)##BC033884|ZER1|10444|zer-1 homolog (C. elegans)##BC052563|ZER1|10444|zer-1 homolog (C. elegans)##NM_006336|ZER1|10444|zer-1 homolog (C. elegans)	0.014025	
chr16	15616988	15617084	reg1024180.p1	5.005	+	BC023603 NM_001142469	-20914	+	AK057180 NM_033201 TSC_hg19_v1_chr16_+_15528363 AK293431 BC008967	-88636	+	TSC_hg19_v1_chr16_+_15489637 AK096918 AK293380 BC061514	-127386	+	BC137165 BC137170 BC144514 BC144515 TSC_hg19_v1_chr16_-_15737004 AK302667 AK095840 BC064914 NM_001184998 NM_001184999 NM_014647	119957	-	BC033900 NM_001143979	120087	+	NM_017668 BC001421 TSC_hg19_v1_chr16_+_15744101 AK000108 AK025815	127071	+	BC023603|C16orf45|89927|chromosome 16 open reading frame 45##NM_001142469|C16orf45|89927|chromosome 16 open reading frame 45##AK057180|C16orf45|89927|chromosome 16 open reading frame 45##NM_033201|C16orf45|89927|chromosome 16 open reading frame 45##AK293431|C16orf45|89927|chromosome 16 open reading frame 45##BC008967|C16orf45|89927|chromosome 16 open reading frame 45##AK096918|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK293380|MPV17L|255027|MPV17 mitochondrial membrane protein-like##BC061514|MPV17L|255027|MPV17 mitochondrial membrane protein-like##BC137165|KIAA0430|9665|KIAA0430##BC137170|KIAA0430|9665|KIAA0430##BC144514|KIAA0430|9665|KIAA0430##BC144515|KIAA0430|9665|KIAA0430##AK302667|KIAA0430|9665|KIAA0430##AK095840|KIAA0430|9665|KIAA0430##BC064914|KIAA0430|9665|KIAA0430##NM_001184998|KIAA0430|9665|KIAA0430##NM_001184999|KIAA0430|9665|KIAA0430##NM_014647|KIAA0430|9665|KIAA0430##BC033900|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##NM_001143979|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##NM_017668|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC001421|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK000108|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK025815|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)	0.182098	
chr2	192542851	192542942	reg1028154.p2	5.005	+	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	-34	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-432798	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-526589	-	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	168842	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	169075	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	516418	-	NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2	0.0	
chr4	2698264	2698434	reg1025502.p1	5.005	+	AB000459 AB000460 AB000461 NM_003704 BC136646 BC144337 BC144339 BC144340	-71176	+	NM_001185009 BC031935	-227169	+	TSC_hg19_v1_chr4_+_2470846 AK312534 AK309509 U95140	-227473	+	AK026176 NM_001161527	59401	-	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	59714	-	TSC_hg19_v1_chr4_+_2794755 AK225497 NM_001122681 BC022996	96386	+	AB000459|FAM193A|8603|family with sequence similarity 193, member A##AB000460|FAM193A|8603|family with sequence similarity 193, member A##AB000461|FAM193A|8603|family with sequence similarity 193, member A##NM_003704|FAM193A|8603|family with sequence similarity 193, member A##BC136646|FAM193A|8603|family with sequence similarity 193, member A##BC144337|FAM193A|8603|family with sequence similarity 193, member A##BC144339|FAM193A|8603|family with sequence similarity 193, member A##BC144340|FAM193A|8603|family with sequence similarity 193, member A##NM_001185009|RNF4|6047|ring finger protein 4##BC031935|RNF4|6047|ring finger protein 4##AK312534|RNF4|6047|ring finger protein 4##AK309509|RNF4|6047|ring finger protein 4##U95140|RNF4|6047|ring finger protein 4##AK026176|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001161527|TNIP2|79155|TNFAIP3 interacting protein 2##AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2##AK225497|SH3BP2|6452|SH3-domain binding protein 2##NM_001122681|SH3BP2|6452|SH3-domain binding protein 2##BC022996|SH3BP2|6452|SH3-domain binding protein 2	0.013596	
chr7	11383584	11383728	reg1027459.p1	5.005	+	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	-370146	+	AK130950 TSC_hg19_v1_chr7_-_10979760 AK024837 U94586 BC105295 NM_002489	-403872	-	CR407618 CR541716 TSC_hg19_v1_chr7_-_10979730 AF201077 BC101794 BC101796	-403947	-	TSC_hg19_v1_chr7_-_11871825 AK092252 AX747433 NM_015204	488133	-	TSC_hg19_v1_chr7_+_12250952 NM_001134232 NM_018374 AK311651 AK002135 BC033901 BC028108 BC039741 AK223263	867269	+	TSC_hg19_v1_chr7_-_12443512 AK075525 BC144316 BC144319	1059876	-	AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14##AK130950|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK024837|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##U94586|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC105295|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_002489|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR407618|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR541716|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AF201077|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101794|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101796|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK092252|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_015204|THSD7A|221981|thrombospondin, type I, domain containing 7A##NM_001134232|TMEM106B|54664|transmembrane protein 106B##NM_018374|TMEM106B|54664|transmembrane protein 106B##AK311651|TMEM106B|54664|transmembrane protein 106B##AK002135|TMEM106B|54664|transmembrane protein 106B##BC033901|TMEM106B|54664|transmembrane protein 106B##BC028108|TMEM106B|54664|transmembrane protein 106B##BC039741|TMEM106B|54664|transmembrane protein 106B##AK223263|TMEM106B|54664|transmembrane protein 106B##AK075525|VWDE|221806|von Willebrand factor D and EGF domains##BC144316|VWDE|221806|von Willebrand factor D and EGF domains##BC144319|VWDE|221806|von Willebrand factor D and EGF domains	0.994696	CTCF.p2:-12:0.995
chr16	12707527	12707706	reg1023909.p4	5.004	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-637043	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-648532	+	NM_001130007	-697098	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	190035	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	190103	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	287852	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr4	44762273	44762431	reg1025784.p1	5.004	+	TSC_hg19_v1_chr4_-_44728574 AK296051 AB209904 AK055639 AY173948 AK129655 AK308920 AF247786 NM_138335	-33788	-	TSC_hg19_v1_chr4_+_44680469 NM_021927 BX647242 BC036768 BC012338 AK225314 AK023282 AK308667	-81892	+	AK096895 BC103995 BC103996 NM_182592	-108695	-	CU689108 DQ890976 DQ894150 CR933628 BC031087 AK289806 AK299884 BX648937 NM_173536 AK122845	1363661	-	TSC_hg19_v1_chr4_-_46391400 AK125179 NM_001114175	1629047	-	TSC_hg19_v1_chr4_-_46391484 AK307128	1629161	-	AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_021927|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BX647242|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC036768|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC012338|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK225314|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK023282|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK308667|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7##DQ890976|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##DQ894150|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##CR933628|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BC031087|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK289806|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK299884|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BX648937|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##NM_173536|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK122845|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK125179|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_001114175|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK307128|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2	0.830415	CTCF.p2:0:0.830
chr5	148520974	148521092	reg1026482.p1	5.004	+	AB075865 AL832651 AK300420 TSC_hg19_v1_chr5_-_148442626 BC113879 BC114486 AY341075 AB070620 NM_024577	-78362	-	NM_000024 TSC_hg19_v1_chr5_+_148206185 AK313151 BC012481 AK223025 BC073856 BC063486 X04827	-314847	+	AK308471 TSC_hg19_v1_chr5_-_148034091	-486943	-	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	157	+	TSC_hg19_v1_chr5_+_148651421 NM_001146337 NM_152406 BC040723	130381	+	TSC_hg19_v1_chr5_+_148651443 AK095980 AK074185 BC125093 BC125094	130429	+	AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface##X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3##NM_001146337|AFAP1L1|134265|actin filament associated protein 1-like 1##NM_152406|AFAP1L1|134265|actin filament associated protein 1-like 1##BC040723|AFAP1L1|134265|actin filament associated protein 1-like 1##AK095980|AFAP1L1|134265|actin filament associated protein 1-like 1##AK074185|AFAP1L1|134265|actin filament associated protein 1-like 1##BC125093|AFAP1L1|134265|actin filament associated protein 1-like 1##BC125094|AFAP1L1|134265|actin filament associated protein 1-like 1	0.999671	CTCF.p2:1:1.000
chr7	97541788	97541884	reg1027299.p2	5.004	+	TSC_hg19_v1_chr7_-_97501785 AK302189 M27396 AK316224 NM_001178075 NM_001178076 NM_001673 NM_183356	-40041	-	BC008723 TSC_hg19_v1_chr7_-_97501721 BC014621	-40132	-	AK302242 AK000379 NM_001178077 NM_133436	-40386	-	TSC_hg19_v1_chr7_-_97601600 AK309693 BC015431 BC042035	59758	-	BC062733 TSC_hg19_v1_chr7_-_97601645 BC029615	59807	-	TSC_hg19_v1_chr7_-_97601657 BC030024	59824	-	AK302189|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##M27396|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK316224|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178075|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178076|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001673|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_183356|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC008723|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC014621|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK302242|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK000379|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178077|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_133436|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC015431|MGC72080|389538|MGC72080 pseudogene##BC042035|MGC72080|389538|MGC72080 pseudogene##BC062733|MGC72080|389538|MGC72080 pseudogene##BC029615|MGC72080|389538|MGC72080 pseudogene	0.0	
chr8	144065607	144065711	reg1013793.p1	5.004	+	AB463555 NM_000498 X54741	-66403	-	X55764 AF478474 BC096285 BC096286 BC096287 NM_000497 NM_001026213	-104426	-	D84290 NM_002066 BC126336 BC126338	-149438	+	TSC_hg19_v1_chr8_+_144099945 NM_001127213 NM_002346 AK223074 AK129615 AK311983 BC003392 U42376 Z68179	34283	+	TSC_hg19_v1_chr8_+_144102304 BC119708 BC119709 AB529045 U56145	36668	+	TSC_hg19_v1_chr8_+_144120683 BC073830 AK094450 NM_173687 BC120993 BC063497	55016	+	NM_000498|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##X54741|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##X55764|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##AF478474|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096285|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096286|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096287|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_000497|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_001026213|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##D84290|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##NM_002066|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126336|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126338|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##NM_001127213|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002346|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK223074|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK129615|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK311983|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC003392|LY6E|4061|lymphocyte antigen 6 complex, locus E##U42376|LY6E|4061|lymphocyte antigen 6 complex, locus E##Z68179|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119708|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119709|LY6E|4061|lymphocyte antigen 6 complex, locus E##U56145|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC073830|C8orf31|286122|chromosome 8 open reading frame 31##AK094450|C8orf31|286122|chromosome 8 open reading frame 31##NM_173687|C8orf31|286122|chromosome 8 open reading frame 31##BC120993|C8orf31|286122|chromosome 8 open reading frame 31##BC063497|C8orf31|286122|chromosome 8 open reading frame 31	0.99546	CTCF.p2:9:0.995
chr8	38815111	38815291	reg1026283.p2	5.004	+	AK098787 NM_021623 TSC_hg19_v1_chr8_+_38758793 AK296068 AK291842 AF286164	-56390	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	-170433	+	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	-170479	+	NM_153692 AK075205 BC057765 AK300197	16508	+	AL834224 BC004878 BC109050 BC109049 AF353991 AK075027 TSC_hg19_v1_chr8_-_38854016 AK225093	38811	-	TSC_hg19_v1_chr8_-_38854029 AK314703 AK075155 NM_001024380 NM_001024381 NM_031940 NM_078473	38831	-	AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_153692|HTRA4|203100|HtrA serine peptidase 4##AK075205|HTRA4|203100|HtrA serine peptidase 4##BC057765|HTRA4|203100|HtrA serine peptidase 4##AK300197|HTRA4|203100|HtrA serine peptidase 4##AL834224|TM2D2|83877|TM2 domain containing 2##BC004878|TM2D2|83877|TM2 domain containing 2##BC109050|TM2D2|83877|TM2 domain containing 2##BC109049|TM2D2|83877|TM2 domain containing 2##AF353991|TM2D2|83877|TM2 domain containing 2##AK075027|TM2D2|83877|TM2 domain containing 2##AK225093|TM2D2|83877|TM2 domain containing 2##AK314703|TM2D2|83877|TM2 domain containing 2##AK075155|TM2D2|83877|TM2 domain containing 2##NM_001024380|TM2D2|83877|TM2 domain containing 2##NM_001024381|TM2D2|83877|TM2 domain containing 2##NM_031940|TM2D2|83877|TM2 domain containing 2##NM_078473|TM2D2|83877|TM2 domain containing 2	0.0	
chr14	50087191	50087290	reg1026937.p1	5.002	+	NM_152329 NM_203467 TSC_hg19_v1_chr14_+_50065473 BC030142 BX648029	-21780	+	BC032813 BC035313 L31610 U14973 AK026649 BC015974 NM_001030001 NM_001032 AB055780 AK307833 TSC_hg19_v1_chr14_-_50053095	-34147	-	AK309211 NM_001113498	-1943084	-	TSC_hg19_v1_chr14_-_50087339 BC003145 BC000741 BC070207 AK311959 AB063609 NM_001001 BC107716	104	-	TSC_hg19_v1_chr14_+_50087493 NM_002408 BC006390 BC018912 AK075199 AK056167 AK293231 DQ892713 DQ896859	467	+	BC013322 TSC_hg19_v1_chr14_-_50100693 BX248264 BC011400 AK001425	13456	-	NM_152329|LRR1|122769|leucine rich repeat protein 1##NM_203467|LRR1|122769|leucine rich repeat protein 1##BC030142|LRR1|122769|leucine rich repeat protein 1##BX648029|LRR1|122769|leucine rich repeat protein 1##BC032813|RPS29|6235|ribosomal protein S29##BC035313|RPS29|6235|ribosomal protein S29##L31610|RPS29|6235|ribosomal protein S29##U14973|RPS29|6235|ribosomal protein S29##AK026649|RPS29|6235|ribosomal protein S29##BC015974|RPS29|6235|ribosomal protein S29##NM_001030001|RPS29|6235|ribosomal protein S29##NM_001032|RPS29|6235|ribosomal protein S29##AB055780|RPS29|6235|ribosomal protein S29##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##BC003145|RPL36AL|6166|ribosomal protein L36a-like##BC000741|RPL36AL|6166|ribosomal protein L36a-like##BC070207|RPL36AL|6166|ribosomal protein L36a-like##AK311959|RPL36AL|6166|ribosomal protein L36a-like##AB063609|RPL36AL|6166|ribosomal protein L36a-like##NM_001001|RPL36AL|6166|ribosomal protein L36a-like##BC107716|RPL36AL|6166|ribosomal protein L36a-like##NM_002408|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##BC006390|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##BC018912|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK075199|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK056167|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK293231|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##DQ892713|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##DQ896859|MGAT2|4247|mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##BC013322|DNAAF2|55172|dynein, axonemal, assembly factor 2##BX248264|DNAAF2|55172|dynein, axonemal, assembly factor 2##BC011400|DNAAF2|55172|dynein, axonemal, assembly factor 2##AK001425|DNAAF2|55172|dynein, axonemal, assembly factor 2	0.0	
chr16	89070897	89071077	reg1030070.p2	5.002	+	AB527670 EU446890 BC047019 AK314766 AB010419 BC062624 NM_005187 TSC_hg19_v1_chr16_-_89043569	-27584	-	AB010420 NM_175931	-63381	-	AB528852 EU190484 BC130001 BC130002 NM_001080487	-137946	-	TSC_hg19_v1_chr16_-_89119364 AK055272	48382	-	NM_001127214 NM_001243279 NM_174917 TSC_hg19_v1_chr16_+_89160259	89250	+	TSC_hg19_v1_chr16_+_89160285 BC028399 AK290963 BC064609 BC072391 AK075499	89320	+	EU446890|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC047019|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AK314766|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010419|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC062624|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_005187|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##EU190484|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130001|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130002|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001080487|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001127214|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001243279|ACSF3|197322|acyl-CoA synthetase family member 3##NM_174917|ACSF3|197322|acyl-CoA synthetase family member 3##BC028399|ACSF3|197322|acyl-CoA synthetase family member 3##AK290963|ACSF3|197322|acyl-CoA synthetase family member 3##BC064609|ACSF3|197322|acyl-CoA synthetase family member 3##BC072391|ACSF3|197322|acyl-CoA synthetase family member 3##AK075499|ACSF3|197322|acyl-CoA synthetase family member 3	0.0	
chrX	15722134	15722254	reg1026167.p1	5.002	+	BC014317 NM_020665	-39041	-	AK315144 NM_021804 AB193259	-101960	-	NM_001721	-196764	+	AB021660 AK291050 NM_007220	34207	+	BC113454 BC113480 NM_005089 TSC_hg19_v1_chrX_+_15808594 D49677 BC050451 BC065719 AK309673 HQ258575	86405	+	TSC_hg19_v1_chrX_-_15872876 AF251295	150682	-	BC014317|TMEM27|57393|transmembrane protein 27##NM_020665|TMEM27|57393|transmembrane protein 27##AK315144|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##NM_021804|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##AB193259|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##NM_001721|BMX|660|BMX non-receptor tyrosine kinase##AB021660|CA5B|11238|carbonic anhydrase VB, mitochondrial##AK291050|CA5B|11238|carbonic anhydrase VB, mitochondrial##NM_007220|CA5B|11238|carbonic anhydrase VB, mitochondrial##BC113454|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC113480|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##NM_005089|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##D49677|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC050451|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC065719|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AK309673|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##HQ258575|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	0.976696	CTCF.p2:-21:0.977
chr1	213102124	213102304	reg1028766.p2	5.001	+	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	-70534	+	TSC_hg19_v1_chr1_-_213031441 AY030238 AY030239 AK092887	-70750	-	AY640234 BC035742 NM_001024601	-81246	-	TSC_hg19_v1_chr1_+_213123945 AK290973 NM_001136474 NM_001136475 NM_024749 AK022567 AK096605 BC053836 BC051856 BC028194	21703	+	AK302675 TSC_hg19_v1_chr1_+_213124038	21809	+	TSC_hg19_v1_chr1_-_213188830 AK299208	86597	-	AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AY030238|FLVCR1-AS1|642946|FLVCR1 antisense RNA 1 (non-protein coding)##AY030239|FLVCR1-AS1|642946|FLVCR1 antisense RNA 1 (non-protein coding)##AY640234|C1orf227|149643|chromosome 1 open reading frame 227##BC035742|C1orf227|149643|chromosome 1 open reading frame 227##NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227##AK290973|VASH2|79805|vasohibin 2##NM_001136474|VASH2|79805|vasohibin 2##NM_001136475|VASH2|79805|vasohibin 2##NM_024749|VASH2|79805|vasohibin 2##AK022567|VASH2|79805|vasohibin 2##AK096605|VASH2|79805|vasohibin 2##BC053836|VASH2|79805|vasohibin 2##BC051856|VASH2|79805|vasohibin 2##BC028194|VASH2|79805|vasohibin 2##AK302675|VASH2|79805|vasohibin 2##AK299208|ANGEL2|90806|angel homolog 2 (Drosophila)	0.0	
chr12	31789403	31789583	reg1001475.p1	5.001	+	TSC_hg19_v1_chr12_-_31743924 BC068580 NM_144973	-45575	-	BC000024 NM_001135811 NM_021238 TSC_hg19_v1_chr12_-_31479121 NM_001135812	-310354	-	TSC_hg19_v1_chr12_-_31479085 AF212220	-310392	-	AK290248 NM_001135864	10600	+	BC039535 NM_173802	22627	+	NM_001135863 TSC_hg19_v1_chr12_+_31812621 AL832339 BC039107	23121	+	BC068580|DENND5B|160518|DENN/MADD domain containing 5B##NM_144973|DENND5B|160518|DENN/MADD domain containing 5B##BC000024|FAM60A|58516|family with sequence similarity 60, member A##NM_001135811|FAM60A|58516|family with sequence similarity 60, member A##NM_021238|FAM60A|58516|family with sequence similarity 60, member A##NM_001135812|FAM60A|58516|family with sequence similarity 60, member A##AF212220|FAM60A|58516|family with sequence similarity 60, member A##AK290248|METTL20|254013|methyltransferase like 20##NM_001135864|METTL20|254013|methyltransferase like 20##BC039535|METTL20|254013|methyltransferase like 20##NM_173802|METTL20|254013|methyltransferase like 20##NM_001135863|METTL20|254013|methyltransferase like 20##AL832339|METTL20|254013|methyltransferase like 20##BC039107|METTL20|254013|methyltransferase like 20	0.0	
chr4	35409388	35409518	reg1028964.p1	5.001	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-4686994	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-4687259	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-4687454	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	836584	-	AK131492 NM_001136536 AK304357 AK316523	873793	+	BC157885 NM_001170700	876190	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.991563	CTCF.p2:18:0.992
chr6	136353306	136353420	reg1031165.p1	5.001	+	AK290582 AB038040 NM_018945 TSC_hg19_v1_chr6_+_136172838 AJ251860 BC070267	-180512	+	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	-534399	+	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	-534478	-	TSC_hg19_v1_chr6_-_136571414 AK292303 BC063688 AK125758 NM_001099286 NM_138419	218066	-	BC078160 BC063846 TSC_hg19_v1_chr6_-_136610926 BX649160 BC016682	257547	-	BC132780 BC144281 BC144282 BC144299 TSC_hg19_v1_chr6_-_136610938 BC047887 BC056894 D79986 NM_001077440 NM_001077441 NM_014739	257597	-	AK290582|PDE7B|27115|phosphodiesterase 7B##AB038040|PDE7B|27115|phosphodiesterase 7B##NM_018945|PDE7B|27115|phosphodiesterase 7B##AJ251860|PDE7B|27115|phosphodiesterase 7B##BC070267|PDE7B|27115|phosphodiesterase 7B##BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##AK292303|FAM54A|113115|family with sequence similarity 54, member A##BC063688|FAM54A|113115|family with sequence similarity 54, member A##AK125758|FAM54A|113115|family with sequence similarity 54, member A##NM_001099286|FAM54A|113115|family with sequence similarity 54, member A##NM_138419|FAM54A|113115|family with sequence similarity 54, member A##BC078160|BCLAF1|9774|BCL2-associated transcription factor 1##BC063846|BCLAF1|9774|BCL2-associated transcription factor 1##BX649160|BCLAF1|9774|BCL2-associated transcription factor 1##BC016682|BCLAF1|9774|BCL2-associated transcription factor 1##BC132780|BCLAF1|9774|BCL2-associated transcription factor 1##BC144281|BCLAF1|9774|BCL2-associated transcription factor 1##BC144282|BCLAF1|9774|BCL2-associated transcription factor 1##BC144299|BCLAF1|9774|BCL2-associated transcription factor 1##BC047887|BCLAF1|9774|BCL2-associated transcription factor 1##BC056894|BCLAF1|9774|BCL2-associated transcription factor 1##D79986|BCLAF1|9774|BCL2-associated transcription factor 1##NM_001077440|BCLAF1|9774|BCL2-associated transcription factor 1##NM_001077441|BCLAF1|9774|BCL2-associated transcription factor 1##NM_014739|BCLAF1|9774|BCL2-associated transcription factor 1	0.072016	
chr9	130788673	130788818	reg1027871.p1	5.001	+	TSC_hg19_v1_chr9_-_130742813 AK058004 NM_001035254	-45936	-	BC137087 BC137088 BC047949 NM_203305 BC142952	-75814	-	BC015233 NM_003863	-87983	-	AK122729 NM_197956	40853	-	TSC_hg19_v1_chr9_+_130830492 AK290991 NM_001006641	41738	+	AJ619990 TSC_hg19_v1_chr9_+_130830643	41874	+	AK058004|FAM102A|399665|family with sequence similarity 102, member A##NM_001035254|FAM102A|399665|family with sequence similarity 102, member A##BC137087|FAM102A|399665|family with sequence similarity 102, member A##BC137088|FAM102A|399665|family with sequence similarity 102, member A##BC047949|FAM102A|399665|family with sequence similarity 102, member A##NM_203305|FAM102A|399665|family with sequence similarity 102, member A##BC142952|FAM102A|399665|family with sequence similarity 102, member A##BC015233|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##NM_003863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1##AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	0.0	
chr9	139738140	139738321	reg1011966.p1	5.001	+	TSC_hg19_v1_chr9_+_139702403 BC035786 BC018960	-35815	+	TSC_hg19_v1_chr9_+_139702398 AK307431	-35833	+	TSC_hg19_v1_chr9_+_139702390 GQ169126	-35839	+	NM_001080482	636	+	TSC_hg19_v1_chr9_+_139743239 NM_001135861 NM_014172	5017	+	TSC_hg19_v1_chr9_+_139743450 AF131857 AF285119	5264	+	BC035786|C9orf86|55684|chromosome 9 open reading frame 86##BC018960|C9orf86|55684|chromosome 9 open reading frame 86##AK307431|C9orf86|55684|chromosome 9 open reading frame 86##GQ169126|C9orf86|55684|chromosome 9 open reading frame 86##NM_001080482|C9orf172|389813|chromosome 9 open reading frame 172##NM_001135861|PHPT1|29085|phosphohistidine phosphatase 1##NM_014172|PHPT1|29085|phosphohistidine phosphatase 1##AF131857|PHPT1|29085|phosphohistidine phosphatase 1##AF285119|PHPT1|29085|phosphohistidine phosphatase 1	0.139688	
chr10	43697702	43697806	reg1024909.p1	5.000	+	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	-63812	+	TSC_hg19_v1_chr10_+_43572516 NM_020630 NM_020975 BC003072 BC004257 X15262 AK291807 AB384817 CU678360 CU678648 Y12528	-125151	+	TSC_hg19_v1_chr10_+_43278248 AK308420 BC043345	-419504	+	BC022548 NM_145313	64612	-	BC054876 AY358584 NM_001184963 NM_173160	169336	+	TSC_hg19_v1_chr10_-_43892200 NM_001098208	194465	-	AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_020630|RET|5979|ret proto-oncogene##NM_020975|RET|5979|ret proto-oncogene##BC003072|RET|5979|ret proto-oncogene##BC004257|RET|5979|ret proto-oncogene##X15262|RET|5979|ret proto-oncogene##AK291807|RET|5979|ret proto-oncogene##Y12528|RET|5979|ret proto-oncogene##AK308420|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC043345|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC022548|RASGEF1A|221002|RasGEF domain family, member 1A##NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A##BC054876|FXYD4|53828|FXYD domain containing ion transport regulator 4##AY358584|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001184963|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_173160|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F	0.0	
chr12	111051693	111051873	reg1027306.p2	5.000	+	AK124744 TSC_hg19_v1_chr12_-_111021124	-30657	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	-30713	-	TSC_hg19_v1_chr12_-_111020755 AY357944	-30990	-	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	142	+	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	75175	-	AK293543 NM_001040107	75816	-	AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AY357944|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1	0.0	
chr15	31523089	31523243	reg1022829.p1	5.000	+	NM_001243538	-117	-	GQ502181 HM135791 NM_001252020	-69738	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-129249	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	96172	+	AJ430383 NM_130901	424375	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	639663	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.0	
chr16	29655711	29655892	reg1029285.p1	5.000	+	AB040413 AB055226 TSC_hg19_v1_chr16_-_29625045	-30759	-	TSC_hg19_v1_chr16_-_29606667 AK316536	-49128	-	CU687812 AK304513 TSC_hg19_v1_chr16_-_29606405	-49456	-	TSC_hg19_v1_chr16_+_29674283 NM_001030288 X60502 BC012350	18531	+	TSC_hg19_v1_chr16_+_29674567 AK292626 AK313750	18764	+	TSC_hg19_v1_chr16_+_29674568 J04168 J04536 NM_003123	18772	+	AK304513|LOC440354|440354|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene##NM_001030288|SPN|6693|sialophorin##X60502|SPN|6693|sialophorin##BC012350|SPN|6693|sialophorin##AK292626|SPN|6693|sialophorin##AK313750|SPN|6693|sialophorin##J04536|SPN|6693|sialophorin##NM_003123|SPN|6693|sialophorin	0.0	
chr17	48347567	48347696	reg1027415.p1	5.000	+	TSC_hg19_v1_chr17_-_48278993 BC036531 Z74615 NM_000088	-68638	-	AB384988 DQ893571 EU176569 CU691368 M36546 X07884 AB209597 TSC_hg19_v1_chr17_-_48278986	-68701	-	S67495 TSC_hg19_v1_chr17_-_48274424	-73218	-	AY358204 NM_001168215	1135	+	NM_153229 AK090637 AX746552 BC064507	4192	+	TSC_hg19_v1_chr17_+_48423495 AJ277442 NM_022167 BC052262 AK299999 BC036069 AY358090	75835	+	BC036531|COL1A1|1277|collagen, type I, alpha 1##Z74615|COL1A1|1277|collagen, type I, alpha 1##NM_000088|COL1A1|1277|collagen, type I, alpha 1##DQ893571|COL1A1|1277|collagen, type I, alpha 1##EU176569|COL1A1|1277|collagen, type I, alpha 1##M36546|COL1A1|1277|collagen, type I, alpha 1##X07884|COL1A1|1277|collagen, type I, alpha 1##AB209597|COL1A1|1277|collagen, type I, alpha 1##AY358204|TMEM92|162461|transmembrane protein 92##NM_001168215|TMEM92|162461|transmembrane protein 92##NM_153229|TMEM92|162461|transmembrane protein 92##AK090637|TMEM92|162461|transmembrane protein 92##BC064507|TMEM92|162461|transmembrane protein 92##AJ277442|XYLT2|64132|xylosyltransferase II##NM_022167|XYLT2|64132|xylosyltransferase II##BC052262|XYLT2|64132|xylosyltransferase II##AK299999|XYLT2|64132|xylosyltransferase II##BC036069|XYLT2|64132|xylosyltransferase II##AY358090|XYLT2|64132|xylosyltransferase II	0.0	
chr2	191209030	191209182	reg1030888.p1	5.000	+	TSC_hg19_v1_chr2_+_191208645 BC106006	-450	+	TSC_hg19_v1_chr2_+_191208326 AK093560	-732	+	NM_001128928 NM_002194 TSC_hg19_v1_chr2_+_191208270	-870	+	TSC_hg19_v1_chr2_+_191273080 AK127176 NM_017694	63957	+	AK098085 TSC_hg19_v1_chr2_+_191301120	91964	+	AK296987 TSC_hg19_v1_chr2_-_191399436	190321	-	BC106006|INPP1|3628|inositol polyphosphate-1-phosphatase##AK093560|INPP1|3628|inositol polyphosphate-1-phosphatase##NM_001128928|INPP1|3628|inositol polyphosphate-1-phosphatase##NM_002194|INPP1|3628|inositol polyphosphate-1-phosphatase##AK127176|MFSD6|54842|major facilitator superfamily domain containing 6##NM_017694|MFSD6|54842|major facilitator superfamily domain containing 6##AK098085|MFSD6|54842|major facilitator superfamily domain containing 6##AK296987|TMEM194B|100131211|transmembrane protein 194B	0.0	
chr3	176532189	176532306	reg1025256.p1	5.000	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	-1955157	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	-2373527	+	BC032555 NM_014932	-3416004	+	TSC_hg19_v1_chr3_-_176914267 BX648935	382003	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	382704	-	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	382812	-	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.169688	
chr5	464139	464320	reg1026096.p1	5.000	+	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	-20879	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	-20999	-	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-159939	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	8883	-	BC101669 BC101671 BC143328 U28043 BC011555 NM_004174 TSC_hg19_v1_chr5_-_524565	60276	-	NM_018140 TSC_hg19_v1_chr5_+_612451	148199	+	AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845##BC101669|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC101671|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC143328|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##U28043|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC011555|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##NM_004174|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##NM_018140|CEP72|55722|centrosomal protein 72kDa	0.0	
chr6	28323613	28323794	reg1006292.p1	5.000	+	TSC_hg19_v1_chr6_+_28317723 AK091225 AX746861 NM_001242894 NM_001242895 NM_024493 AK122790 AK313532 BC006118	-5977	+	NM_001243241 NM_001243242 NM_001243244 NM_030899	-19552	-	AL833617 NM_001135216 NM_001243243 BC008490	-19786	-	TSC_hg19_v1_chr6_-_28367519 BC041661 AB007886 NM_001163391	43818	-	AK309235 AL833347 AK092117 AX747363 NM_001012455	87550	-	BC133691 BC148315 AY324826 NM_182701	159863	-	AK091225|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001242894|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001242895|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_024493|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##AK122790|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##AK313532|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##BC006118|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001243241|ZNF323|64288|zinc finger protein 323##NM_001243242|ZNF323|64288|zinc finger protein 323##NM_001243244|ZNF323|64288|zinc finger protein 323##NM_030899|ZNF323|64288|zinc finger protein 323##AL833617|ZNF323|64288|zinc finger protein 323##NM_001135216|ZNF323|64288|zinc finger protein 323##NM_001243243|ZNF323|64288|zinc finger protein 323##BC008490|ZNF323|64288|zinc finger protein 323##BC041661|ZSCAN12|9753|zinc finger and SCAN domain containing 12##AB007886|ZSCAN12|9753|zinc finger and SCAN domain containing 12##NM_001163391|ZSCAN12|9753|zinc finger and SCAN domain containing 12##AK309235|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AL833347|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AK092117|ZSCAN23|222696|zinc finger and SCAN domain containing 23##NM_001012455|ZSCAN23|222696|zinc finger and SCAN domain containing 23##BC133691|GPX6|257202|glutathione peroxidase 6 (olfactory)##BC148315|GPX6|257202|glutathione peroxidase 6 (olfactory)##AY324826|GPX6|257202|glutathione peroxidase 6 (olfactory)##NM_182701|GPX6|257202|glutathione peroxidase 6 (olfactory)	0.0	
chr15	49338786	49338928	reg1028657.p1	4.999	+	CU689588 AB385300 TSC_hg19_v1_chr15_-_49338644 D87445 AK307480 AK308183 BC008635 BC033001 NM_001193489 NM_014701	-221	-	BC033907 NM_203349	-83217	-	TSC_hg19_v1_chr15_+_49170330 NM_014335 BC114944 BC114946 AK315365 AF092135 AF109873 AF349444 AK098383 AL109701 BC024151 AL357456 BC007944 AB527924 AF274951	-168485	+	AF120268 L40388 TSC_hg19_v1_chr15_-_49447811 AB462991 CR542063 CU680378 EU446744 EU831466 EU831553 AK222590 AB209799 AF100762 AF212227 AF084260 BC012629 AK312643 AK295598 NM_001143887 NM_004236	108952	-	TSC_hg19_v1_chr15_+_49447990 AF461816 AL832745 NM_001001556	109134	+	TSC_hg19_v1_chr15_+_49462423 NM_002044 AK301361 BC005141 AK098049 AK316440 M84443 BT006901 CU675015 DQ890583 DQ893742	123606	+	D87445|SECISBP2L|9728|SECIS binding protein 2-like##AK307480|SECISBP2L|9728|SECIS binding protein 2-like##AK308183|SECISBP2L|9728|SECIS binding protein 2-like##BC008635|SECISBP2L|9728|SECIS binding protein 2-like##BC033001|SECISBP2L|9728|SECIS binding protein 2-like##NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like##NM_014701|SECISBP2L|9728|SECIS binding protein 2-like##BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_014335|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114946|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK315365|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF092135|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF109873|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF349444|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK098383|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL109701|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC024151|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL357456|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC007944|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF120268|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##L40388|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##CR542063|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU446744|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831466|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831553|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK222590|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AB209799|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF100762|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF212227|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF084260|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##BC012629|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK312643|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK295598|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_001143887|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_004236|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF461816|GALK2|2585|galactokinase 2##AL832745|GALK2|2585|galactokinase 2##NM_001001556|GALK2|2585|galactokinase 2##NM_002044|GALK2|2585|galactokinase 2##AK301361|GALK2|2585|galactokinase 2##BC005141|GALK2|2585|galactokinase 2##AK098049|GALK2|2585|galactokinase 2##AK316440|GALK2|2585|galactokinase 2##M84443|GALK2|2585|galactokinase 2##BT006901|GALK2|2585|galactokinase 2##DQ890583|GALK2|2585|galactokinase 2##DQ893742|GALK2|2585|galactokinase 2	0.010969	
chr19	36100952	36101132	reg1026602.p2	4.999	+	AK058032 AK223259 NM_000704	-46483	-	TSC_hg19_v1_chr19_-_36036923 CR627053	-64134	-	TSC_hg19_v1_chr19_+_36036553 NM_001242597 NM_001242598 NM_032635 Y18007 BC001118 CU674562	-64498	+	TSC_hg19_v1_chr19_+_36103655 BC064390 NM_015302 BC171905 BC157882 AK307703 AB020648 BC013947	2629	+	TSC_hg19_v1_chr19_+_36119937 BC031682	18900	+	TSC_hg19_v1_chr19_+_36119959 BC002868 BC004204 NM_024321 AK301669 AB384666 CU678262	18964	+	AK058032|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##AK223259|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##NM_000704|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##CR627053|LOC100506469|100506469|uncharacterized LOC100506469##NM_001242597|TMEM147|10430|transmembrane protein 147##NM_001242598|TMEM147|10430|transmembrane protein 147##NM_032635|TMEM147|10430|transmembrane protein 147##Y18007|TMEM147|10430|transmembrane protein 147##BC001118|TMEM147|10430|transmembrane protein 147##BC064390|HAUS5|23354|HAUS augmin-like complex, subunit 5##NM_015302|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC171905|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC157882|HAUS5|23354|HAUS augmin-like complex, subunit 5##AK307703|HAUS5|23354|HAUS augmin-like complex, subunit 5##AB020648|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC013947|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC031682|RBM42|79171|RNA binding motif protein 42##BC002868|RBM42|79171|RNA binding motif protein 42##BC004204|RBM42|79171|RNA binding motif protein 42##NM_024321|RBM42|79171|RNA binding motif protein 42##AK301669|RBM42|79171|RNA binding motif protein 42	0.089981	
chr2	46997084	46997176	reg1028214.p1	4.999	+	TSC_hg19_v1_chr2_+_46926340 BC032862 AF073958 NM_144949	-70729	+	TSC_hg19_v1_chr2_+_46926049 AK290194 AK296796 AB014571 AL136896 NM_014011	-71057	+	TSC_hg19_v1_chr2_+_46844353 NM_014171 AK291298 AF161488 BC018653 BC006980 BC006979	-152777	+	TSC_hg19_v1_chr2_-_47134945 M23161	137881	-	TSC_hg19_v1_chr2_-_47142893 AF475284 BC037845	145761	-	TSC_hg19_v1_chr2_-_47142934 BC040357	145804	-	BC032862|SOCS5|9655|suppressor of cytokine signaling 5##AF073958|SOCS5|9655|suppressor of cytokine signaling 5##NM_144949|SOCS5|9655|suppressor of cytokine signaling 5##AK290194|SOCS5|9655|suppressor of cytokine signaling 5##AB014571|SOCS5|9655|suppressor of cytokine signaling 5##AL136896|SOCS5|9655|suppressor of cytokine signaling 5##NM_014011|SOCS5|9655|suppressor of cytokine signaling 5##NM_014171|CRIPT|9419|cysteine-rich PDZ-binding protein##AK291298|CRIPT|9419|cysteine-rich PDZ-binding protein##AF161488|CRIPT|9419|cysteine-rich PDZ-binding protein##BC018653|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006980|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006979|CRIPT|9419|cysteine-rich PDZ-binding protein##M23161|MCFD2|90411|multiple coagulation factor deficiency 2##AF475284|MCFD2|90411|multiple coagulation factor deficiency 2##BC037845|MCFD2|90411|multiple coagulation factor deficiency 2##BC040357|MCFD2|90411|multiple coagulation factor deficiency 2	0.638044	CTCF.p2:8:0.638
chr3	194850577	194850757	reg1022013.p2	4.999	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-443164	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-444044	+	NM_018385	-457462	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	141183	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	313035	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	419446	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.0	
chr4	38134098	38134277	reg1026646.p2	4.999	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-155170	+	AF095288 BC069114 BC069400 NM_006607	-172132	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-241398	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	531639	+	AF289565 TSC_hg19_v1_chr4_-_38666549	532302	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	650412	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr5	44332460	44332588	reg1010067.p1	4.999	+	Z50101 AB385177 AM392664 AM393615 TSC_hg19_v1_chr5_+_43609371	-723208	+	TSC_hg19_v1_chr5_+_43603313 BC110543 BC110544	-729170	+	TSC_hg19_v1_chr5_+_43603303 AK299622 U40490	-729225	+	AF508782 AB002097 AF411527 BC069561 CR541665 CR541688 GQ351295 HQ258011 NM_004465 U67918 BC105023 BC105021 BC143772	56241	-	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	476503	+	AF064876 TSC_hg19_v1_chr5_-_45695947	1363367	-	Z50101|NNT|23530|nicotinamide nucleotide transhydrogenase##AM392664|NNT|23530|nicotinamide nucleotide transhydrogenase##AM393615|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110543|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110544|NNT|23530|nicotinamide nucleotide transhydrogenase##AK299622|NNT|23530|nicotinamide nucleotide transhydrogenase##U40490|NNT|23530|nicotinamide nucleotide transhydrogenase##AF508782|FGF10|2255|fibroblast growth factor 10##AB002097|FGF10|2255|fibroblast growth factor 10##AF411527|FGF10|2255|fibroblast growth factor 10##BC069561|FGF10|2255|fibroblast growth factor 10##CR541665|FGF10|2255|fibroblast growth factor 10##CR541688|FGF10|2255|fibroblast growth factor 10##GQ351295|FGF10|2255|fibroblast growth factor 10##HQ258011|FGF10|2255|fibroblast growth factor 10##NM_004465|FGF10|2255|fibroblast growth factor 10##U67918|FGF10|2255|fibroblast growth factor 10##BC105023|FGF10|2255|fibroblast growth factor 10##BC105021|FGF10|2255|fibroblast growth factor 10##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1	0.0	
chr6	2524508	2524618	reg1027451.p1	4.999	+	TSC_hg19_v1_chr6_+_2245995 AK023629	-278550	+	CR541929 CR541947 DQ892789 DQ896036 AF042377 TSC_hg19_v1_chr6_-_2245809 AK130651 AK313953 BC000117 NM_001500	-278765	-	AF040260 NM_001253846	-348339	-	NM_152554	110734	-	BX647582 NM_001012418 AK096893	226613	-	TSC_hg19_v1_chr6_+_2765561 AK315047	241017	+	CR541929|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541947|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ892789|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ896036|GMDS|2762|GDP-mannose 4,6-dehydratase##AF042377|GMDS|2762|GDP-mannose 4,6-dehydratase##AK130651|GMDS|2762|GDP-mannose 4,6-dehydratase##AK313953|GMDS|2762|GDP-mannose 4,6-dehydratase##BC000117|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001500|GMDS|2762|GDP-mannose 4,6-dehydratase##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_152554|C6orf195|154386|chromosome 6 open reading frame 195##BX647582|MYLK4|340156|myosin light chain kinase family, member 4##NM_001012418|MYLK4|340156|myosin light chain kinase family, member 4##AK096893|MYLK4|340156|myosin light chain kinase family, member 4##AK315047|WRNIP1|56897|Werner helicase interacting protein 1	0.993964	CTCF.p2:15:0.994
chr13	47338338	47338419	reg1025281.p1	4.998	+	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-210871	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-210958	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	-211055	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	32937	-	AK314132 BX647777 AK302787 NM_000621 NM_001165947	132689	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1237073	-	HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.23088	CTCF.p2:6:0.231
chr18	60384165	60384253	reg1028068.p2	4.998	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-283	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	-1545	+	NM_017742 TSC_hg19_v1_chr18_+_60190696 BC006340	-193455	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	99	+	TSC_hg19_v1_chr18_-_60795898 AF401211	411726	-	BC027258 NM_000633 NM_000657	602351	-	AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##NM_017742|ZCCHC2|54877|zinc finger, CCHC domain containing 2##BC006340|ZCCHC2|54877|zinc finger, CCHC domain containing 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr20	46341357	46341474	reg1025224.p2	4.998	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-210731	+	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	-210793	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-355927	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	73337	-	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	73903	-	AB037836 TSC_hg19_v1_chr20_-_47444291	1102871	-	AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1	0.283151	CTCF.p2:4:0.283
chr6	156153819	156153943	reg1031922.p1	4.998	+	AF190122 NM_015718	-376845	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-518258	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-518296	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	945182	+	TSC_hg19_v1_chr6_+_157099206 AB587572	945344	+	TSC_hg19_v1_chr6_+_157099283 AF521671	945403	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.675253	CTCF.p2:-8:0.675
chr6	389719	389871	reg1027930.p1	4.998	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-97298	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-97710	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	1969	+	AF508547 BC101697 BC101699 NM_148959	267158	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	303295	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.741935	CTCF.p2:-67:0.742
chr7	27824159	27824339	reg1027817.p2	4.998	+	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-44430	+	BC001764 TSC_hg19_v1_chr7_+_27779809	-44440	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	-44474	+	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	395952	-	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	396157	-	L05913 NM_182899	514690	+	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5	0.997204	CTCF.p2:5:0.997
chr1	160510004	160510184	reg1026666.p1	4.997	+	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	-17065	-	NM_020335 TSC_hg19_v1_chr1_+_160370394	-139715	+	M96739 AK313700 NM_005598 BC013789	-173230	+	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	39153	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	39194	-	AK314244 NM_003037 BC012602	106969	-	AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1	0.0	
chr12	4378563	4378713	reg1024977.p1	4.997	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-396138	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-516256	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-516370	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	4406	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	51753	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	110162	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.0	
chr14	103240904	103241085	reg1007825.p1	4.997	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-181833	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	-181996	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-264880	-	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	2825	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	2906	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	148004	+	AF155595|RCOR1|23186|REST corepressor 1##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)	0.0	
chr16	49738813	49738920	reg1026554.p1	4.997	+	BC021181 BC021718 NM_144602 CU676858	-331038	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-423132	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	-423366	-	NM_015069	122051	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	320274	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	361027	+	BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##NM_015069|ZNF423|23090|zinc finger protein 423##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3	0.718216	CTCF.p2:13:0.707
chr17	27944245	27944371	reg1028759.p1	4.997	+	TSC_hg19_v1_chr17_+_27920483 NM_152345	-23806	+	TSC_hg19_v1_chr17_-_27916646 AK294785 BC048196	-27653	-	TSC_hg19_v1_chr17_-_27916606 BC067358 NM_001085454 NM_014030	-27702	-	AK096431 NM_032854	4084	-	BC028205 TSC_hg19_v1_chr17_-_27949878 AL833952	5543	-	TSC_hg19_v1_chr17_-_28088446 BC011636	144150	-	NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B##AK294785|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC048196|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC067358|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_001085454|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_014030|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AK096431|CORO6|84940|coronin 6##NM_032854|CORO6|84940|coronin 6##BC028205|CORO6|84940|coronin 6##AL833952|CORO6|84940|coronin 6##BC011636|SSH2|85464|slingshot homolog 2 (Drosophila)	0.738088	CTCF.p2:10:0.710
chr1	8411869	8411987	reg1032911.p1	4.997	+	NM_001080397	-27539	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-325530	-	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	-325567	-	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	72089	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	465664	-	GU170215 NM_001201483	519706	-	NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##GU170215|ENO1|2023|enolase 1, (alpha)##NM_001201483|ENO1|2023|enolase 1, (alpha)	0.914912	CTCF.p2:-13:0.915
chr3	58173757	58173833	reg1000675.p2	4.997	+	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	-179648	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-430593	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-495056	-	NM_004944	26602	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	49488	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	49735	+	AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6	0.0	
chr4	10015365	10015485	reg1003453.p1	4.997	+	NM_000798	-232168	+	AF529414 NM_001040448	-569166	+	BC100993 AY509884 BC100991 BC100992 NM_001105662 NM_001242326 NM_001242327 NM_001242328 NM_001242329 NM_001242330 NM_001242331 NM_001242332	-650572	+	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	7699	-	AK310895 BC018897 NM_001001290 AK096819	26497	-	TSC_hg19_v1_chr4_-_10118286 AB385044 CU674086 CU677992	102862	-	NM_000798|DRD5|1816|dopamine receptor D5##AF529414|DEFB131|644414|defensin, beta 131##NM_001040448|DEFB131|644414|defensin, beta 131##BC100993|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##NM_001242326|LOC728373|728373|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242327|LOC728369|728369|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242328|LOC728379|728379|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242329|USP17L5|728386|ubiquitin specific peptidase 17-like 5##NM_001242330|LOC728393|728393|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242331|LOC728400|728400|ubiquitin carboxyl-terminal hydrolase 17-like##NM_001242332|LOC728405|728405|ubiquitin carboxyl-terminal hydrolase 17-like##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9	0.0	
chr4	41074274	41074455	reg1022567.p2	4.997	+	BC088372 TSC_hg19_v1_chr4_-_40936716	-137686	-	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-215189	-	BC042401 NM_024677 BC036568 AK024063	-322418	+	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	142205	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	184532	+	TSC_hg19_v1_chr4_+_41258913 BC000332 BC018838	184554	+	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.0	
chr4	89594218	89594352	reg1034155.p1	4.997	+	AK296379 TSC_hg19_v1_chr4_+_89513611 AK289990 BC038960 D25215 NM_014606	-80664	+	TSC_hg19_v1_chr4_-_89444931 NM_001042616 NM_032906	-149333	-	TSC_hg19_v1_chr4_-_89444916 AB206972 BC007876 AK312082	-149364	-	BC104883 TSC_hg19_v1_chr4_-_89618996 AL834329 AK054689 BC022544 NM_153757	24690	-	AB385402 AB020721 TSC_hg19_v1_chr4_-_89744384 AK027138 BC033006 BC086875 BC058029 AK296932 NM_001015045 AK091787 AX747185	149996	-	CU687656 BC063126 BC041029 BC053569 BX647410 NM_014883	383934	-	AK296379|HERC3|8916|hect domain and RLD 3##AK289990|HERC3|8916|hect domain and RLD 3##BC038960|HERC3|8916|hect domain and RLD 3##D25215|HERC3|8916|hect domain and RLD 3##NM_014606|HERC3|8916|hect domain and RLD 3##NM_001042616|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_032906|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AB206972|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##BC007876|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AK312082|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##BC104883|NAP1L5|266812|nucleosome assembly protein 1-like 5##AL834329|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK054689|NAP1L5|266812|nucleosome assembly protein 1-like 5##BC022544|NAP1L5|266812|nucleosome assembly protein 1-like 5##NM_153757|NAP1L5|266812|nucleosome assembly protein 1-like 5##AB020721|FAM13A|10144|family with sequence similarity 13, member A##AK027138|FAM13A|10144|family with sequence similarity 13, member A##BC033006|FAM13A|10144|family with sequence similarity 13, member A##BC086875|FAM13A|10144|family with sequence similarity 13, member A##BC058029|FAM13A|10144|family with sequence similarity 13, member A##AK296932|FAM13A|10144|family with sequence similarity 13, member A##NM_001015045|FAM13A|10144|family with sequence similarity 13, member A##AK091787|FAM13A|10144|family with sequence similarity 13, member A##BC063126|FAM13A|10144|family with sequence similarity 13, member A##BC041029|FAM13A|10144|family with sequence similarity 13, member A##BC053569|FAM13A|10144|family with sequence similarity 13, member A##BX647410|FAM13A|10144|family with sequence similarity 13, member A##NM_014883|FAM13A|10144|family with sequence similarity 13, member A	0.972812	CTCF.p2:-12:0.973
chr11	44117140	44117233	reg1028933.p2	4.996	+	NM_001178083 NM_207122 U62740 TSC_hg19_v1_chr11_+_44117224 AK312375 BC010058 AK296713	-12	+	NM_001127219 NM_032592 AK057649 BC020197 AY026508 AK304074 TSC_hg19_v1_chr11_+_44088043 AK307380	-29280	+	AB231734 NM_001031854 BC144554	-47639	+	BC068545 TSC_hg19_v1_chr11_+_44117272 U72263 BC013050	85	+	NM_000401 BX648142	573	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	214490	-	NM_001178083|EXT2|2132|exostosin 2##NM_207122|EXT2|2132|exostosin 2##U62740|EXT2|2132|exostosin 2##AK312375|EXT2|2132|exostosin 2##BC010058|EXT2|2132|exostosin 2##AK296713|EXT2|2132|exostosin 2##NM_001127219|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##NM_032592|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK057649|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##BC020197|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AY026508|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK304074|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AK307380|ACCS|84680|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)##AB231734|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##NM_001031854|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##BC144554|ACCSL|390110|1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional)-like##BC068545|EXT2|2132|exostosin 2##U72263|EXT2|2132|exostosin 2##BC013050|EXT2|2132|exostosin 2##NM_000401|EXT2|2132|exostosin 2##BX648142|EXT2|2132|exostosin 2##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4	0.815317	CTCF.p2:-4:0.815
chr12	52419301	52419450	reg1004959.p1	4.996	+	AK297526 NM_001202233	-2760	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	-18634	+	AK299496 NM_020327	-72212	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	25841	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	44379	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	44423	+	AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44	0.0	
chr15	29657062	29657140	reg1031755.p1	4.996	+	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	-95072	-	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	-95131	-	NM_001130414 NM_005503 AF047348 BC082986	-443252	+	NM_015307	205825	-	AK304758 TSC_hg19_v1_chr15_-_30114336	457241	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	457522	-	AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)	0.0	
chr15	45903643	45903785	reg1027391.p2	4.996	+	TSC_hg19_v1_chr15_+_45879759 AK128626	-23941	+	TSC_hg19_v1_chr15_+_45879576 AK057545 BC004819 AK315581 AB527698	-24107	+	AF080470 NM_012388 TSC_hg19_v1_chr15_+_45879539 AK091740	-24228	+	TSC_hg19_v1_chr15_+_45927245 AK222463 AF042284 NM_021199 AF151802 AK313111 BC016836	23535	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	1572673	+	TSC_hg19_v1_chr15_+_48009541 AK290032	2105874	+	AK128626|PLDN|26258|pallidin homolog (mouse)##AK057545|PLDN|26258|pallidin homolog (mouse)##BC004819|PLDN|26258|pallidin homolog (mouse)##AK315581|PLDN|26258|pallidin homolog (mouse)##AF080470|PLDN|26258|pallidin homolog (mouse)##NM_012388|PLDN|26258|pallidin homolog (mouse)##AK222463|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF042284|SQRDL|58472|sulfide quinone reductase-like (yeast)##NM_021199|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF151802|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK313111|SQRDL|58472|sulfide quinone reductase-like (yeast)##BC016836|SQRDL|58472|sulfide quinone reductase-like (yeast)##AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	0.245913	CTCF.p2:4:0.246
chr16	50186278	50186458	reg1026781.p1	4.996	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	-86408	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	-86475	+	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	-127228	+	TSC_hg19_v1_chr16_+_50186838 AK300918 NM_001040284 NM_001040285	467	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	114108	+	TSC_hg19_v1_chr16_+_50308041 BC039891	121685	+	AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##AK300918|PAPD5|64282|PAP associated domain containing 5##NM_001040284|PAPD5|64282|PAP associated domain containing 5##NM_001040285|PAPD5|64282|PAP associated domain containing 5##AK093706|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7	0.0	
chr2	208217770	208217909	reg1027221.p2	4.996	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-186214	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-187183	-	BC112076 BC112078 NM_173077 AJ422118	-413539	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	176804	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	176882	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	176942	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.875209	CTCF.p2:12:0.875
chr6	150390498	150390604	reg1023266.p1	4.996	+	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	-338	-	BC131600 AB528849 AY039682 NM_130900	-43918	-	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	-105389	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	73690	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	299607	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	530469	+	AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L##AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1	0.212616	CTCF.p2:-58:0.213
chr7	26008134	26008315	reg1028640.p2	4.996	+	AB040290 AF330057 AF440392 NM_022150	-740144	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-788353	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-843284	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	183709	+	TSC_hg19_v1_chr7_-_26232151 BX538099	223927	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	232117	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.0	
chr7	33847457	33847637	reg1029774.p1	4.996	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-678466	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-698570	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-745225	-	AK289963 NM_133468 AK096150 BC060868	97595	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	850372	+	DQ287932 NM_015283	1230105	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	1.586995	CTCF.p2:5:0.904	CTCF.p2:36:0.683
chr11	118971090	118971217	reg1032392.p1	4.995	+	TSC_hg19_v1_chr11_-_118966176 NM_002105 X14850	-4978	-	CR457079 AB464561 BC013416 BC004915 BC011694 TSC_hg19_v1_chr11_-_118966173	-5015	-	BX647328 NM_001024382 X04217	-12443	+	AK225994 BC000325 BC047771 BC008817 TSC_hg19_v1_chr11_-_118972586 AK301973 AK312783	1405	-	NM_001382 AK095718	1664	-	TSC_hg19_v1_chr11_+_118978097 AB094094 AK025223 NM_014807	6974	+	NM_002105|H2AFX|3014|H2A histone family, member X##X14850|H2AFX|3014|H2A histone family, member X##CR457079|H2AFX|3014|H2A histone family, member X##BC013416|H2AFX|3014|H2A histone family, member X##BC004915|H2AFX|3014|H2A histone family, member X##BC011694|H2AFX|3014|H2A histone family, member X##BX647328|HMBS|3145|hydroxymethylbilane synthase##NM_001024382|HMBS|3145|hydroxymethylbilane synthase##X04217|HMBS|3145|hydroxymethylbilane synthase##AK225994|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##BC000325|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##BC047771|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##AK301973|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##AK312783|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##NM_001382|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##AK095718|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##AB094094|C2CD2L|9854|C2CD2-like##AK025223|C2CD2L|9854|C2CD2-like##NM_014807|C2CD2L|9854|C2CD2-like	0.808012	CTCF.p2:3:0.808
chr1	161011718	161011898	reg1003269.p2	4.995	+	AF111713 TSC_hg19_v1_chr1_-_161008767 NM_001113205 NM_001113206 NM_001113207 AK299487	-3050	-	AF191495 TSC_hg19_v1_chr1_-_161008713 BC001699 BC038219	-3094	-	TSC_hg19_v1_chr1_-_160990981 NM_016946	-20757	-	AK314876 BC035505 TSC_hg19_v1_chr1_-_161015745	3909	-	TSC_hg19_v1_chr1_-_161015769 NM_007122 NM_207005	3959	-	TSC_hg19_v1_chr1_-_161039466 AB463226 BC053688 BC025732	27659	-	NM_001113205|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##NM_001113206|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##NM_001113207|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##AK299487|F11R|50848|F11 receptor##BC001699|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##BC038219|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##NM_016946|F11R|50848|F11 receptor##AK314876|USF1|7391|upstream transcription factor 1##BC035505|USF1|7391|upstream transcription factor 1##NM_007122|USF1|7391|upstream transcription factor 1##NM_207005|USF1|7391|upstream transcription factor 1##BC053688|ARHGAP30|257106|Rho GTPase activating protein 30##BC025732|ARHGAP30|257106|Rho GTPase activating protein 30	0.0	
chr22	18278965	18279099	reg1025728.p1	4.995	+	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-21698	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-21809	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	-21825	-	TSC_hg19_v1_chr22_-_18484268 AK127487	205196	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	228229	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	281656	+	BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26	0.046857	
chr8	11395317	11395422	reg1025666.p1	4.995	+	S76617 NM_001715 BC018703 BC004473 BC038555	-43776	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-71140	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-190365	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	166351	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	231899	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	264815	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.0	
chr8	143555163	143555294	reg1026630.p1	4.995	+	AB005297 NM_001702	-9852	+	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	-70691	-	BC144560 AK125848 AK131461 NM_207414	-1037911	-	AF193421 D87468 BC075802 BC012321 NM_015193 TSC_hg19_v1_chr8_-_143695839	140598	-	TSC_hg19_v1_chr8_-_143751386 BC071862	196126	-	TSC_hg19_v1_chr8_-_143751397 AK127631 NM_001077527 NM_003724 BX640755	196173	-	AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein##AF193421|ARC|23237|activity-regulated cytoskeleton-associated protein##D87468|ARC|23237|activity-regulated cytoskeleton-associated protein##BC075802|ARC|23237|activity-regulated cytoskeleton-associated protein##BC012321|ARC|23237|activity-regulated cytoskeleton-associated protein##NM_015193|ARC|23237|activity-regulated cytoskeleton-associated protein##BC071862|JRK|8629|jerky homolog (mouse)##AK127631|JRK|8629|jerky homolog (mouse)##NM_001077527|JRK|8629|jerky homolog (mouse)##NM_003724|JRK|8629|jerky homolog (mouse)##BX640755|JRK|8629|jerky homolog (mouse)	0.999288	CTCF.p2:-7:0.999
chr1	111091116	111091295	reg1030342.p2	4.994	+	NM_005549	-29409	-	AY358683 AF333024 NM_032414 AY029225 BC025399 DQ891570 DQ894763	-97414	+	HQ257924 NM_006402 BC062619	-140679	-	AK290061 NM_004974 TSC_hg19_v1_chr1_-_111148981	57777	-	BC043564 NM_001204269	82890	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	126147	-	NM_005549|KCNA10|3744|potassium voltage-gated channel, shaker-related subfamily, member 10##AY358683|PROK1|84432|prokineticin 1##AF333024|PROK1|84432|prokineticin 1##NM_032414|PROK1|84432|prokineticin 1##AY029225|PROK1|84432|prokineticin 1##BC025399|PROK1|84432|prokineticin 1##DQ891570|PROK1|84432|prokineticin 1##DQ894763|PROK1|84432|prokineticin 1##HQ257924|HBXIP|10542|hepatitis B virus x interacting protein##NM_006402|HBXIP|10542|hepatitis B virus x interacting protein##BC062619|HBXIP|10542|hepatitis B virus x interacting protein##AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##BC043564|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_001204269|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3	0.0	
chr12	92933159	92933321	reg1023808.p1	4.994	+	AJ845168 NM_001025232	-111317	-	AJ845165 AJ845166 NM_001025233	-115506	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-393597	-	NM_001037671 NM_001178097	163378	+	NM_001004330 AK128530	197047	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	389698	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr18	14074351	14074426	reg1025732.p2	4.994	+	AK315319 BC094710 NM_000529 AK289381	-158852	-	BC095531 NM_005913	-248846	+	TSC_hg19_v1_chr18_+_13726671 AK296370 BC017816 BX647977 AK303842 BC005290 AK292561 AB007858 AF067791 NM_003799 AB020966 BC036798	-347698	+	BC010705 AK096748 BC024227 BC037787 NM_145287	58069	-	TSC_hg19_v1_chr18_+_14179298 BC127726	104921	+	BC140940 BX649118 AK307658 NM_001137671	469156	-	AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC095531|MC5R|4161|melanocortin 5 receptor##NM_005913|MC5R|4161|melanocortin 5 receptor##AK296370|RNMT|8731|RNA (guanine-7-) methyltransferase##BC017816|RNMT|8731|RNA (guanine-7-) methyltransferase##BX647977|RNMT|8731|RNA (guanine-7-) methyltransferase##AK303842|RNMT|8731|RNA (guanine-7-) methyltransferase##BC005290|RNMT|8731|RNA (guanine-7-) methyltransferase##AK292561|RNMT|8731|RNA (guanine-7-) methyltransferase##AB007858|RNMT|8731|RNA (guanine-7-) methyltransferase##AF067791|RNMT|8731|RNA (guanine-7-) methyltransferase##NM_003799|RNMT|8731|RNA (guanine-7-) methyltransferase##AB020966|RNMT|8731|RNA (guanine-7-) methyltransferase##BC036798|RNMT|8731|RNA (guanine-7-) methyltransferase##BC010705|ZNF519|162655|zinc finger protein 519##AK096748|ZNF519|162655|zinc finger protein 519##BC024227|ZNF519|162655|zinc finger protein 519##BC037787|ZNF519|162655|zinc finger protein 519##NM_145287|ZNF519|162655|zinc finger protein 519##BC127726|ANKRD20A5P|440482|ankyrin repeat domain 20 family, member A5, pseudogene##BC140940|POTEC|388468|POTE ankyrin domain family, member C##BX649118|POTEC|388468|POTE ankyrin domain family, member C##AK307658|POTEC|388468|POTE ankyrin domain family, member C##NM_001137671|POTEC|388468|POTE ankyrin domain family, member C	0.897516	CTCF.p2:-72:0.704
chr21	44527735	44527880	reg1028928.p1	4.994	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-123	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-182	-	L19501 BC007257 NM_001178008 NM_001178009	-31360	-	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	61367	+	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	318182	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	319188	-	NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##L19501|CBS|875|cystathionine-beta-synthase##BC007257|CBS|875|cystathionine-beta-synthase##NM_001178008|CBS|875|cystathionine-beta-synthase##NM_001178009|CBS|875|cystathionine-beta-synthase##NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1	0.839838	CTCF.p2:27:0.840
chr1	12082619	12082729	reg1029916.p2	4.993	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-3104	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-3140	+	FJ618905 NM_021933	-3376	+	M83554 NM_001243 BC136400 BC171762 S75768	40870	+	D86042 BC063482 NM_152942 BC073839 BC141804	103342	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	144387	+	AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.016325	
chr2	197127903	197128068	reg1026884.p1	4.993	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-91667	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-91706	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-194490	-	BC117194 BC117198 AB037722 NM_020760	329307	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	376372	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	536428	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.0	
chr4	147053637	147053799	reg1029399.p1	4.993	+	BC033879 TSC_hg19_v1_chr4_-_146859976	-193750	-	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	-194041	-	NM_001080531	-452363	+	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	43149	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	389278	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	506373	+	AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827##NM_001080531|C4orf51|646603|chromosome 4 open reading frame 51##NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2	0.0	
chr6	34131834	34131901	reg1004202.p2	4.993	+	AB385221 EU432124 HQ258665 HQ258669 U92457 BC130526 BC130528 BC144057 NM_000841 X80818 AK308669	-30465	-	BC112314 BC143981 Y00695 BC069675 NM_001040109 NM_001184698 NM_002418	-360093	-	BC039864 NM_181336 TSC_hg19_v1_chr6_-_33756906	-374957	-	NM_002131 NM_145899 NM_145903 TSC_hg19_v1_chr6_+_34204617	72744	+	TSC_hg19_v1_chr6_+_34204649 AK096863 M23616 M23617 NM_145901 NM_145902 AK301434	72783	+	TSC_hg19_v1_chr6_+_34204678 X14957 X14958 AK308245	72804	+	EU432124|GRM4|2914|glutamate receptor, metabotropic 4##HQ258665|GRM4|2914|glutamate receptor, metabotropic 4##HQ258669|GRM4|2914|glutamate receptor, metabotropic 4##U92457|GRM4|2914|glutamate receptor, metabotropic 4##BC130526|GRM4|2914|glutamate receptor, metabotropic 4##BC130528|GRM4|2914|glutamate receptor, metabotropic 4##BC144057|GRM4|2914|glutamate receptor, metabotropic 4##NM_000841|GRM4|2914|glutamate receptor, metabotropic 4##X80818|GRM4|2914|glutamate receptor, metabotropic 4##BC112314|MLN|4295|motilin##BC143981|MLN|4295|motilin##Y00695|MLN|4295|motilin##BC069675|MLN|4295|motilin##NM_001040109|MLN|4295|motilin##NM_001184698|MLN|4295|motilin##NM_002418|MLN|4295|motilin##BC039864|LEMD2|221496|LEM domain containing 2##NM_181336|LEMD2|221496|LEM domain containing 2##NM_002131|HMGA1|3159|high mobility group AT-hook 1##NM_145899|HMGA1|3159|high mobility group AT-hook 1##NM_145903|HMGA1|3159|high mobility group AT-hook 1##AK096863|HMGA1|3159|high mobility group AT-hook 1##M23616|HMGA1|3159|high mobility group AT-hook 1##M23617|HMGA1|3159|high mobility group AT-hook 1##NM_145901|HMGA1|3159|high mobility group AT-hook 1##NM_145902|HMGA1|3159|high mobility group AT-hook 1##AK301434|HMGA1|3159|high mobility group AT-hook 1##X14957|HMGA1|3159|high mobility group AT-hook 1##X14958|HMGA1|3159|high mobility group AT-hook 1##AK308245|HMGA1|3159|high mobility group AT-hook 1	0.999878	
chr8	19229829	19229989	reg1004828.p2	4.993	+	TSC_hg19_v1_chr8_+_19171505 NM_001174160 NM_022071 AK024799 AK293301 BC082982 NM_001174159	-58626	+	TSC_hg19_v1_chr8_-_18871214 AK091317 AX746913 NM_015310	-358623	-	GU727648 TSC_hg19_v1_chr8_-_18871128	-358797	-	BX649103 NM_001130518	230121	-	AY358441 NM_018371	310184	-	AK314625 TSC_hg19_v1_chr8_-_19615422	385508	-	NM_001174160|SH2D4A|63898|SH2 domain containing 4A##NM_022071|SH2D4A|63898|SH2 domain containing 4A##AK024799|SH2D4A|63898|SH2 domain containing 4A##AK293301|SH2D4A|63898|SH2 domain containing 4A##BC082982|SH2D4A|63898|SH2 domain containing 4A##NM_001174159|SH2D4A|63898|SH2 domain containing 4A##AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3##GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX649103|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_001130518|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AY358441|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018371|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AK314625|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1	0.0	
chr9	37565717	37565835	reg1022948.p2	4.993	+	TSC_hg19_v1_chr9_+_37485944 BC014331 AK023452 AK302345 AK303167 NM_022490 AK301347 AK024032 AK225050 BC017766 BC001337 CR457313 AK091294 AX746899	-79746	+	TSC_hg19_v1_chr9_-_37465448 AK292404	-100335	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	-100381	-	AF174598 AF176705 NM_012166 TSC_hg19_v1_chr9_-_37576280	10489	-	CR627326 AB435233 TSC_hg19_v1_chr9_-_37592574 BC034247	26743	-	TSC_hg19_v1_chr9_-_37592575 BC029423 NM_001001790 NM_001134484 NM_001134485	26829	-	BC014331|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK023452|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK302345|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK303167|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##NM_022490|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK301347|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK024032|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK225050|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC017766|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC001337|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##CR457313|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK091294|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5##AF174598|FBXO10|26267|F-box protein 10##AF176705|FBXO10|26267|F-box protein 10##NM_012166|FBXO10|26267|F-box protein 10##AB435233|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC034247|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC029423|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001001790|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134484|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134485|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)	0.0	
chrX	146557635	146557774	reg1027785.p1	4.993	+	NM_001144064 NM_001244892	-661456	-	NM_001144064 NM_001244892	-666403	+	NM_004709 Y08902 BC113600 BC113604 HQ258719	-1648643	+	TSC_hg19_v1_chrX_+_146993468 BC086957 NM_001185075 NM_001185076 NM_001185081 NM_001185082 NM_002024 S65791 X69962 M67468	435789	+	BC038998 TSC_hg19_v1_chrX_+_146993559	435847	+	TSC_hg19_v1_chrX_+_146993685 CU691632	435989	+	NM_001144064|CXorf51A|100129239|chromosome X open reading frame 51A##NM_001244892|CXorf51B|100133053|chromosome X open reading frame 51B##NM_001144064|CXorf51A|100129239|chromosome X open reading frame 51A##NM_001244892|CXorf51B|100133053|chromosome X open reading frame 51B##NM_004709|CXorf1|9142|chromosome X open reading frame 1##Y08902|CXorf1|9142|chromosome X open reading frame 1##BC113600|CXorf1|9142|chromosome X open reading frame 1##BC113604|CXorf1|9142|chromosome X open reading frame 1##HQ258719|CXorf1|9142|chromosome X open reading frame 1##BC086957|FMR1|2332|fragile X mental retardation 1##NM_001185075|FMR1|2332|fragile X mental retardation 1##NM_001185076|FMR1|2332|fragile X mental retardation 1##NM_001185081|FMR1|2332|fragile X mental retardation 1##NM_001185082|FMR1|2332|fragile X mental retardation 1##NM_002024|FMR1|2332|fragile X mental retardation 1##S65791|FMR1|2332|fragile X mental retardation 1##X69962|FMR1|2332|fragile X mental retardation 1##M67468|FMR1|2332|fragile X mental retardation 1##BC038998|FMR1|2332|fragile X mental retardation 1	0.995989	CTCF.p2:13:0.996
chr11	118754502	118754642	reg1025785.p1	4.992	+	AK291512 NM_001716 BC110352 X68149 AB464488	-12	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-92638	-	TSC_hg19_v1_chr11_-_118661865 Z11685	-92693	-	NM_032966 X68829	9528	+	AB094091 NM_182557	27040	-	NM_006760 Y13645 BC113900 AY455312 AB009454	72491	+	AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_006760|UPK2|7379|uroplakin 2##Y13645|UPK2|7379|uroplakin 2##BC113900|UPK2|7379|uroplakin 2##AY455312|UPK2|7379|uroplakin 2##AB009454|UPK2|7379|uroplakin 2	0.0	
chr1	38595301	38595395	reg1026123.p1	4.992	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-82899	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-116918	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-116963	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	730038	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	743668	-	AK312811 BC051675 AK123051 NM_030772	751929	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.881971	CTCF.p2:-3:0.882
chr1	54869687	54869812	reg1028192.p2	4.992	+	TSC_hg19_v1_chr1_+_54665866 AF151069 AF325707 AY421759 BC000041 CU674006	-203859	+	TSC_hg19_v1_chr1_+_54665855 AK026171	-203896	+	AK024572 NM_016491 TSC_hg19_v1_chr1_+_54665839	-203907	+	CU688156 AK289474 BC003605 BC127866 BC066365 TSC_hg19_v1_chr1_-_54871828 AF500116	2039	-	NM_018070 NM_145716 TSC_hg19_v1_chr1_-_54872066	2273	-	TSC_hg19_v1_chr1_-_54872087 NM_001009955	2335	-	AF151069|MRPL37|51253|mitochondrial ribosomal protein L37##AF325707|MRPL37|51253|mitochondrial ribosomal protein L37##AY421759|MRPL37|51253|mitochondrial ribosomal protein L37##BC000041|MRPL37|51253|mitochondrial ribosomal protein L37##AK026171|MRPL37|51253|mitochondrial ribosomal protein L37##AK024572|MRPL37|51253|mitochondrial ribosomal protein L37##NM_016491|MRPL37|51253|mitochondrial ribosomal protein L37##AK289474|SSBP3|23648|single stranded DNA binding protein 3##BC003605|SSBP3|23648|single stranded DNA binding protein 3##BC066365|SSBP3|23648|single stranded DNA binding protein 3##AF500116|SSBP3|23648|single stranded DNA binding protein 3##NM_018070|SSBP3|23648|single stranded DNA binding protein 3##NM_145716|SSBP3|23648|single stranded DNA binding protein 3##NM_001009955|SSBP3|23648|single stranded DNA binding protein 3	0.0	
chr16	56435502	56435612	reg1031041.p1	4.992	+	AK056008 TSC_hg19_v1_chr16_+_56225314	-210247	+	NM_020988 NM_138736 TSC_hg19_v1_chr16_+_56225253	-210306	+	AK294334 NM_001190158	-445615	-	AF124145 TSC_hg19_v1_chr16_-_56459357	23772	-	TSC_hg19_v1_chr16_-_56459390 NM_001144 BC069197	23866	-	AJ001810 CR456919 AB590091 AM392991 AM393219 DQ892142 DQ895336 TSC_hg19_v1_chr16_-_56485242 BC001403 BX647665 NM_007006 AK312721 BX537360	49653	-	AK056008|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_020988|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##NM_138736|GNAO1|2775|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O##AK294334|CES5A|221223|carboxylesterase 5A##NM_001190158|CES5A|221223|carboxylesterase 5A##AF124145|AMFR|267|autocrine motility factor receptor##NM_001144|AMFR|267|autocrine motility factor receptor##BC069197|AMFR|267|autocrine motility factor receptor##AJ001810|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##CR456919|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AM392991|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AM393219|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ892142|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##DQ895336|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BC001403|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BX647665|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##NM_007006|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##AK312721|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21##BX537360|NUDT21|11051|nudix (nucleoside diphosphate linked moiety X)-type motif 21	0.0	
chr19	13358742	13358871	reg1030741.p1	4.992	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-94626	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-97514	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-97667	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	258370	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	483773	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	499913	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.248906	CTCF.p2:3:0.249
chr2	42097580	42097760	reg1000202.p2	4.992	+	Y12878 Y12885 AK291696 BX537482 NM_001112802	-1358098	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	-1418448	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-1440239	-	AK124893 NM_001242815	83272	-	TSC_hg19_v1_chr2_+_42275160 NM_138370	177462	+	AB528999 TSC_hg19_v1_chr2_+_42275979	178291	+	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)	0.0	
chr8	22551929	22552063	reg1023408.p3	4.992	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-1212	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-1491	-	AK294968 AK295834 NM_001199881	-1922	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	233328	-	AK092617 BC034917 NM_001160036	292927	+	NM_001160037	301364	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.943231	
chrX	54449774	54449856	reg1025664.p1	4.992	+	TSC_hg19_v1_chrX_-_54384446 AY352048 NM_001002838 NM_020922	-65373	-	TSC_hg19_v1_chrX_-_54209659 BC073166 AK000513 BC136413 BC144081 AY150025 AY121803 BC016138 NM_017848 NM_198456	-240134	-	NM_001184896	-378247	-	TSC_hg19_v1_chrX_+_54466843 BC007699 BC011825 NM_058163 CU680068 U92980	17033	+	AB384834 TSC_hg19_v1_chrX_-_54522017 BC034530	72173	-	TSC_hg19_v1_chrX_-_54522668 AK299635 AK226117 NM_004463 U11690	72781	-	AY352048|WNK3|65267|WNK lysine deficient protein kinase 3##NM_001002838|WNK3|65267|WNK lysine deficient protein kinase 3##NM_020922|WNK3|65267|WNK lysine deficient protein kinase 3##BC073166|FAM120C|54954|family with sequence similarity 120C##AK000513|FAM120C|54954|family with sequence similarity 120C##BC136413|FAM120C|54954|family with sequence similarity 120C##BC144081|FAM120C|54954|family with sequence similarity 120C##AY150025|FAM120C|54954|family with sequence similarity 120C##AY121803|FAM120C|54954|family with sequence similarity 120C##BC016138|FAM120C|54954|family with sequence similarity 120C##NM_017848|FAM120C|54954|family with sequence similarity 120C##NM_198456|FAM120C|54954|family with sequence similarity 120C##NM_001184896|PHF8|23133|PHD finger protein 8##BC007699|TSR2|90121|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)##BC011825|TSR2|90121|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)##NM_058163|TSR2|90121|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)##U92980|TSR2|90121|TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)##BC034530|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##AK299635|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##AK226117|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##NM_004463|FGD1|2245|FYVE, RhoGEF and PH domain containing 1##U11690|FGD1|2245|FYVE, RhoGEF and PH domain containing 1	0.064997	
chr15	31658160	31658275	reg1026340.p2	4.991	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-38879	+	NM_001243538	-135168	-	GQ502181 HM135791 NM_001252020	-204789	-	AJ430383 NM_130901	289324	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	504612	-	TSC_hg19_v1_chr15_-_32162898 AK126002	504726	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr17	70261164	70261312	reg1027362.p1	4.991	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-143998	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-144068	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-144079	+	AK000477 TSC_hg19_v1_chr17_-_70588944	327705	-	AF331643 TSC_hg19_v1_chr17_-_71088816	827578	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	827585	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr2	239015966	239016099	reg1025034.p1	4.991	+	NM_194312 AK124559	-7045	+	TSC_hg19_v1_chr2_+_238969747 BC000586 AK293283	-46265	+	TSC_hg19_v1_chr2_+_238969669 AK301009 BC007891 AF175767 AK298409 DQ893234 DQ896564 CU675851	-46352	+	NM_198582	31330	+	CR533533 FJ491380 FJ491381 CU675457 AB590373 DQ892800 DQ896047 EU832279 EU832364 TSC_hg19_v1_chr2_-_239112267 AL136850 BC035746 AY024365	96207	-	TSC_hg19_v1_chr2_-_239112326 BC006576 HQ658059 HQ658060 NM_030768	96290	-	NM_194312|ESPNL|339768|espin-like##AK124559|ESPNL|339768|espin-like##BC000586|SCLY|51540|selenocysteine lyase##AK293283|SCLY|51540|selenocysteine lyase##AK301009|SCLY|51540|selenocysteine lyase##BC007891|SCLY|51540|selenocysteine lyase##AF175767|SCLY|51540|selenocysteine lyase##AK298409|SCLY|51540|selenocysteine lyase##DQ893234|SCLY|51540|selenocysteine lyase##DQ896564|SCLY|51540|selenocysteine lyase##NM_198582|KLHL30|377007|kelch-like 30 (Drosophila)##CR533533|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##FJ491380|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##FJ491381|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##DQ892800|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##DQ896047|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##EU832279|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##EU832364|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##AL136850|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##BC035746|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##AY024365|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##BC006576|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##HQ658059|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##HQ658060|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##NM_030768|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase	0.114705	
chr4	99014113	99014266	reg1028320.p1	4.991	+	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	-2252931	+	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	-2543813	-	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	-2544010	-	CU691442 BC036870 NM_174952	50156	-	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	168405	+	TSC_hg19_v1_chr4_-_99579781 BC009704 AF065389 AK315723 NM_005723	565570	-	NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC009704|TSPAN5|10098|tetraspanin 5##AF065389|TSPAN5|10098|tetraspanin 5##AK315723|TSPAN5|10098|tetraspanin 5##NM_005723|TSPAN5|10098|tetraspanin 5	0.93188	CTCF.p2:5:0.932
chr7	1105275	1105455	reg1001076.p1	4.991	+	BC014241 NM_138445 AB464540 DQ892659 DQ895899	-8221	+	TSC_hg19_v1_chr7_-_1067984 L07392 BC025971	-37408	-	TSC_hg19_v1_chr7_+_1022978 AK000366	-82396	+	NM_001039966 NM_001505 AF015257	21111	+	NM_001098201 AK289588 U63917 BC067849	22388	+	TSC_hg19_v1_chr7_-_1177884 AF495721 BC006224 NM_001134395 NM_001134396 NM_032350	72497	-	BC014241|GPR146|115330|G protein-coupled receptor 146##NM_138445|GPR146|115330|G protein-coupled receptor 146##DQ892659|GPR146|115330|G protein-coupled receptor 146##DQ895899|GPR146|115330|G protein-coupled receptor 146##BC025971|C7orf50|84310|chromosome 7 open reading frame 50##AK000366|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##NM_001039966|GPER|2852|G protein-coupled estrogen receptor 1##NM_001505|GPER|2852|G protein-coupled estrogen receptor 1##AF015257|GPER|2852|G protein-coupled estrogen receptor 1##NM_001098201|GPER|2852|G protein-coupled estrogen receptor 1##AK289588|GPER|2852|G protein-coupled estrogen receptor 1##U63917|GPER|2852|G protein-coupled estrogen receptor 1##BC067849|GPER|2852|G protein-coupled estrogen receptor 1##AF495721|C7orf50|84310|chromosome 7 open reading frame 50##BC006224|C7orf50|84310|chromosome 7 open reading frame 50##NM_001134395|C7orf50|84310|chromosome 7 open reading frame 50##NM_001134396|C7orf50|84310|chromosome 7 open reading frame 50##NM_032350|C7orf50|84310|chromosome 7 open reading frame 50	0.0	
chrX	118352343	118352439	reg1028218.p1	4.991	+	NM_020721	-67850	-	TSC_hg19_v1_chrX_+_118109314 AK026265	-243053	+	TSC_hg19_v1_chrX_+_118108607 BC098283 BC099847 BC100671 BC103491 NM_001031855 NM_024778	-243738	+	TSC_hg19_v1_chrX_+_118370247 NM_006667 AK313956 Y12711 BC034238 AK293618 DQ891774 DQ894958 CR456993	17874	+	NM_145305 TSC_hg19_v1_chrX_+_118533308 AK094254 BC071871	180896	+	TSC_hg19_v1_chrX_+_118533353 AK091304 AK303932 AX746905 AK292035 CU676444 AL590525	181015	+	NM_020721|KIAA1210|57481|KIAA1210##AK026265|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC098283|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC099847|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC100671|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC103491|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_001031855|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_024778|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_006667|PGRMC1|10857|progesterone receptor membrane component 1##AK313956|PGRMC1|10857|progesterone receptor membrane component 1##Y12711|PGRMC1|10857|progesterone receptor membrane component 1##BC034238|PGRMC1|10857|progesterone receptor membrane component 1##AK293618|PGRMC1|10857|progesterone receptor membrane component 1##DQ891774|PGRMC1|10857|progesterone receptor membrane component 1##DQ894958|PGRMC1|10857|progesterone receptor membrane component 1##CR456993|PGRMC1|10857|progesterone receptor membrane component 1##NM_145305|SLC25A43|203427|solute carrier family 25, member 43##AK094254|SLC25A43|203427|solute carrier family 25, member 43##BC071871|SLC25A43|203427|solute carrier family 25, member 43##AK091304|SLC25A43|203427|solute carrier family 25, member 43##AK303932|SLC25A43|203427|solute carrier family 25, member 43##AK292035|SLC25A43|203427|solute carrier family 25, member 43##AL590525|SLC25A43|203427|solute carrier family 25, member 43	0.368387	CTCF.p2:10:0.368
chr15	32687192	32687304	reg1030337.p1	4.990	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-364505	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-524305	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-524419	-	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	220514	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	246666	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	323009	+	AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1	0.835639	CTCF.p2:2:0.836
chr15	52374921	52375038	reg1027060.p2	4.990	+	TSC_hg19_v1_chr15_+_52311442 BC035492	-63518	+	TSC_hg19_v1_chr15_+_52311432 CR749401	-63545	+	TSC_hg19_v1_chr15_+_52311425 NM_002748	-63560	+	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	29967	-	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	97162	-	TSC_hg19_v1_chr15_+_52472257 AF007131	97356	+	BC035492|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##NM_002748|MAPK6|5597|mitogen-activated protein kinase 6##AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973	0.235203	
chr2	198464460	198464558	reg1027134.p1	4.990	+	NM_001204094	-83488	+	AF093825 AF151853 TSC_hg19_v1_chr2_+_198380804 AK307497 AL080070 AB015441 AK297294 AK297514 AB590538 AJ580638 CR457371	-83695	+	TSC_hg19_v1_chr2_+_198380776 BC005237 NM_001100819 NM_015387 AK027043 AK292938	-83741	+	AK055136 NM_144629 BC111069 TSC_hg19_v1_chr2_-_198540765	76166	-	NM_138395 TSC_hg19_v1_chr2_+_198570134 AB107013 BC026361 BC126294 AK098121 AK301252 BC009115 HQ258326	105620	+	AF272858 BC033674 AK098824 AK058099 NM_033030	185531	-	NM_001204094|MOB4|25843|MOB family member 4, phocein##AF093825|MOB4|25843|MOB family member 4, phocein##AF151853|MOB4|25843|MOB family member 4, phocein##AK307497|MOB4|25843|MOB family member 4, phocein##AL080070|MOB4|25843|MOB family member 4, phocein##AB015441|MOB4|25843|MOB family member 4, phocein##AK297514|MOB4|25843|MOB family member 4, phocein##AJ580638|MOB4|25843|MOB family member 4, phocein##CR457371|MOB4|25843|MOB family member 4, phocein##BC005237|MOB4|25843|MOB family member 4, phocein##NM_001100819|MOB4|25843|MOB family member 4, phocein##NM_015387|MOB4|25843|MOB family member 4, phocein##AK027043|MOB4|25843|MOB family member 4, phocein##AK292938|MOB4|25843|MOB family member 4, phocein##AK055136|RFTN2|130132|raftlin family member 2##NM_144629|RFTN2|130132|raftlin family member 2##BC111069|RFTN2|130132|raftlin family member 2##NM_138395|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AB107013|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC026361|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC126294|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK098121|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK301252|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC009115|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##HQ258326|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)	0.0	
chr2	201374783	201374928	reg1028094.p1	4.990	+	TSC_hg19_v1_chr2_-_201374792 BC059366 BC045189 AK290867 BC067755 AK055884 NM_152387	-23	-	TSC_hg19_v1_chr2_+_201171424 AF193059 BC065817	-203406	+	AL110124 AY450394 AK090867 TSC_hg19_v1_chr2_+_201171276 NM_001100422 NM_001100424 AK002064 AK090703 AK314561 BC010848 BC018736 NM_001100423	-203756	+	TSC_hg19_v1_chr2_+_201390929 NM_001160033 NM_001160046 NM_152524 AK095291 BC048349 BC110583 BX647433 AK302457 BC092412 AY094614	16047	+	TSC_hg19_v1_chr2_+_201450590 AK301052	75732	+	AB046692 NM_001159 TSC_hg19_v1_chr2_+_201450748 BC117179 BC117181	75929	+	BC059366|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC045189|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK290867|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC067755|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK055884|KCTD18|130535|potassium channel tetramerisation domain containing 18##NM_152387|KCTD18|130535|potassium channel tetramerisation domain containing 18##AF193059|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC065817|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001160033|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_001160046|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_152524|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK095291|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC048349|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC110583|SGOL2|151246|shugoshin-like 2 (S. pombe)##BX647433|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK302457|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC092412|SGOL2|151246|shugoshin-like 2 (S. pombe)##AY094614|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK301052|AOX1|316|aldehyde oxidase 1##AB046692|AOX1|316|aldehyde oxidase 1##NM_001159|AOX1|316|aldehyde oxidase 1##BC117179|AOX1|316|aldehyde oxidase 1##BC117181|AOX1|316|aldehyde oxidase 1	0.038961	
chr2	233973987	233974167	reg1021283.p2	4.990	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-48961	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-49018	+	BC069151 BC107053 NM_005383	-76696	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	186189	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	186246	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	186280	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.0	
chr2	8683880	8684060	reg1023045.p2	4.990	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1626383	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1666107	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1677267	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	138233	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	293749	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	459851	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr3	93968285	93968466	reg1001167.p1	4.990	+	AK122674 NM_001195643	-186309	-	TSC_hg19_v1_chr3_+_93781863 AF169972 BC018432 BC020602 BC057238 NM_022072 AK026262	-186531	+	BC045541 TSC_hg19_v1_chr3_-_93781761 AL832912 BC063379 NM_176815	-186631	-	NM_001080448 TSC_hg19_v1_chr3_+_96533435 AK092565 AX747601	2565055	+	AK302040 AK310249 BC031881 BC067287 AK302080 AL133666 NM_173655	3190096	+	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	3515225	+	AK122674|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1##AF169972|NSUN3|63899|NOP2/Sun domain family, member 3##BC018432|NSUN3|63899|NOP2/Sun domain family, member 3##BC020602|NSUN3|63899|NOP2/Sun domain family, member 3##BC057238|NSUN3|63899|NOP2/Sun domain family, member 3##NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3##AK026262|NSUN3|63899|NOP2/Sun domain family, member 3##BC045541|DHFRL1|200895|dihydrofolate reductase-like 1##AL832912|DHFRL1|200895|dihydrofolate reductase-like 1##BC063379|DHFRL1|200895|dihydrofolate reductase-like 1##NM_176815|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001080448|EPHA6|285220|EPH receptor A6##AK092565|EPHA6|285220|EPH receptor A6##AK302040|EPHA6|285220|EPH receptor A6##AK310249|EPHA6|285220|EPH receptor A6##BC031881|EPHA6|285220|EPH receptor A6##BC067287|EPHA6|285220|EPH receptor A6##AK302080|EPHA6|285220|EPH receptor A6##AL133666|EPHA6|285220|EPH receptor A6##NM_173655|EPHA6|285220|EPH receptor A6##BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6	0.0	
chr4	84503466	84503622	reg1032552.p1	4.990	+	TSC_hg19_v1_chr4_+_84457420 DQ345298 BC090956 AY358100 NM_032717 DQ324782	-45963	+	TSC_hg19_v1_chr4_+_84457260 AK055749 AK223543	-46272	+	BC016905 TSC_hg19_v1_chr4_-_84406254 EF531340 BC039573 AY358576 AK022704 AK023676 NM_139076	-97270	-	NM_006168	915842	-	NM_001263 U65887	1000549	+	NM_014991	1383999	-	DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK055749|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK223543|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC016905|FAM175A|84142|family with sequence similarity 175, member A##EF531340|FAM175A|84142|family with sequence similarity 175, member A##BC039573|FAM175A|84142|family with sequence similarity 175, member A##AY358576|FAM175A|84142|family with sequence similarity 175, member A##AK022704|FAM175A|84142|family with sequence similarity 175, member A##AK023676|FAM175A|84142|family with sequence similarity 175, member A##NM_139076|FAM175A|84142|family with sequence similarity 175, member A##NM_006168|NKX6-1|4825|NK6 homeobox 1##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3	0.958596	CTCF.p2:16:0.959
chr5	83018312	83018432	reg1038432.p1	4.990	+	AK313713 NM_001884 X17405 X78076 X78075	-1438	-	NM_001126336 NM_001164097 NM_001164098 NM_004385 TSC_hg19_v1_chr5_+_82767562 U16306 U26555 X15998 AK307642 AB209491 BC050524 D32039	-250755	+	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	-644989	+	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	661874	-	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	662292	-	TSC_hg19_v1_chr5_+_85913757 AK026505	2895386	+	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001126336|VCAN|1462|versican##NM_001164097|VCAN|1462|versican##NM_001164098|VCAN|1462|versican##NM_004385|VCAN|1462|versican##U16306|VCAN|1462|versican##U26555|VCAN|1462|versican##X15998|VCAN|1462|versican##AK307642|VCAN|1462|versican##AB209491|VCAN|1462|versican##BC050524|VCAN|1462|versican##D32039|VCAN|1462|versican##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc	0.208356	CTCF.p2:29:0.208
chr6	149794710	149794890	reg1029218.p1	4.990	+	AY340238 NM_001002255 BC130305 HQ258040	-73292	+	AK315038 NM_015093 AK307650	-155359	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	-155697	+	TSC_hg19_v1_chr6_-_149806031 AK127932	11267	-	TSC_hg19_v1_chr6_-_149806151 AB458221 AB458222 BC157832 NM_207360	11343	-	TSC_hg19_v1_chr6_-_149867153 CU676802 GQ129364 GQ129365 BC064134	72344	-	AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK127932|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AB458221|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AB458222|ZC3H12D|340152|zinc finger CCCH-type containing 12D##BC157832|ZC3H12D|340152|zinc finger CCCH-type containing 12D##NM_207360|ZC3H12D|340152|zinc finger CCCH-type containing 12D##GQ129364|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##GQ129365|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC064134|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4	0.068769	
chr14	54259769	54259918	reg1032648.p1	4.989	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-639793	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-639875	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-639970	-	NM_130851	161426	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	163690	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	603878	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.991	CTCF.p2:-27:0.825
chr17	1964089	1964165	reg1030151.p1	4.989	+	DQ187313 NM_001098202	-4570	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-5729	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-18819	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	242685	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	242913	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	243125	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.0	
chr17	31376955	31377093	reg1031105.p1	4.989	+	AF216311 NM_173847 BC100886 BC100887	-58122	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-121821	+	NM_001033504 NM_015544	-122097	+	AL834182 NM_183377	242981	-	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	1106663	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	1205307	+	AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##NM_001033504|TMEM98|26022|transmembrane protein 98##NM_015544|TMEM98|26022|transmembrane protein 98##AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2	0.775228	CTCF.p2:-15:0.775
chr20	42143074	42143190	reg1022867.p1	4.989	+	TSC_hg19_v1_chr20_+_42143151 AK310345 NM_015478 AK308334 BC039820 BC034398 HQ257883 EU446490	-14	+	TSC_hg19_v1_chr20_+_42136336 NM_032107 AK299199	-6788	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	-56529	+	NM_170693 TSC_hg19_v1_chr20_+_42187666 AK308502	44518	+	BC006523 TSC_hg19_v1_chr20_+_42187715 BC014037 AF169034	44588	+	NM_001199264 BC065511 AK289596	50682	+	AK310345|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##NM_015478|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK308334|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##BC039820|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##BC034398|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##EU446490|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##NM_032107|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK299199|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6##NM_170693|SGK2|10110|serum/glucocorticoid regulated kinase 2##AK308502|SGK2|10110|serum/glucocorticoid regulated kinase 2##BC006523|SGK2|10110|serum/glucocorticoid regulated kinase 2##BC014037|SGK2|10110|serum/glucocorticoid regulated kinase 2##AF169034|SGK2|10110|serum/glucocorticoid regulated kinase 2##NM_001199264|SGK2|10110|serum/glucocorticoid regulated kinase 2##BC065511|SGK2|10110|serum/glucocorticoid regulated kinase 2##AK289596|SGK2|10110|serum/glucocorticoid regulated kinase 2	0.036729	
chrX	80632982	80633100	reg1026447.p1	4.989	+	TSC_hg19_v1_chrX_+_80457600 BC016709 AL136718 AK129610 AF042081 AK310011 AB590910 CR533478	-175393	+	TSC_hg19_v1_chrX_+_80457572 AK309351	-175465	+	AK094058 AX748432 NM_030763	-175601	-	AK314967 NM_000307 TSC_hg19_v1_chrX_+_82763302 X82324 AB464667	2130258	+	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	2483130	+	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	2809931	-	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5##AK314967|POU3F4|5456|POU class 3 homeobox 4##NM_000307|POU3F4|5456|POU class 3 homeobox 4##X82324|POU3F4|5456|POU class 3 homeobox 4##BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	0.043997	
chr10	61224962	61225049	reg1025861.p1	4.988	+	AK299924 NM_001143773	-102345	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-102720	-	AL365474 NM_001143774 AM393181	-287717	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	244719	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	441196	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	441319	-	AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6	0.134137	
chr1	230245938	230246119	reg1023464.p2	4.988	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-43032	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-43086	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-484014	+	BC150638 NM_024554	267362	-	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	532168	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	532205	+	AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2	0.0	
chr14	22944077	22944252	reg1027731.p2	4.988	+	AB463964 NM_001001912 AY726598	-810842	+	NM_001005466 AB529274 BC137371 BC137382	-841118	-	AB528817 NM_001005465	-905290	-	X58763 TSC_hg19_v1_chr14_+_22989364	45185	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	113922	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	113970	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.0	
chr17	28667404	28667486	reg1008161.p2	4.988	+	AK290266 BC137201 BC137202 AY358153 NM_206832 AK172838	-6383	-	NM_000386 TSC_hg19_v1_chr17_-_28619220	-48242	-	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	-48486	-	TSC_hg19_v1_chr17_+_28705953 NM_001304 BC051702 BC045549 BC054116	38494	+	TSC_hg19_v1_chr17_+_28705963 D85390 BC045624	38521	+	TSC_hg19_v1_chr17_+_28705984 U65090 AB385118	38544	+	AK290266|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##BC137201|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##BC137202|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##AY358153|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##NM_206832|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##AK172838|TMIGD1|388364|transmembrane and immunoglobulin domain containing 1##NM_000386|BLMH|642|bleomycin hydrolase##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase##NM_001304|CPD|1362|carboxypeptidase D##BC051702|CPD|1362|carboxypeptidase D##BC045549|CPD|1362|carboxypeptidase D##BC054116|CPD|1362|carboxypeptidase D##D85390|CPD|1362|carboxypeptidase D##BC045624|CPD|1362|carboxypeptidase D##U65090|CPD|1362|carboxypeptidase D	0.0	
chr2	11239425	11239588	reg1028361.p2	4.988	+	BC026110 NM_002236 TSC_hg19_v1_chr2_+_11052109	-187421	+	TSC_hg19_v1_chr2_-_10952912 AK294347 D49489 BC001312 NM_005742	-286586	-	TSC_hg19_v1_chr2_-_10952851 DQ891186 DQ894369 AK289428	-286678	-	AK057872 NM_182500 BC120930 AK292828	33710	+	BC027625 NM_152391 TSC_hg19_v1_chr2_+_11295562	56045	+	TSC_hg19_v1_chr2_+_11295592 AK001091	56075	+	BC026110|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##NM_002236|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6##D49489|PDIA6|10130|protein disulfide isomerase family A, member 6##BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6##NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6##AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6##AK057872|C2orf50|130813|chromosome 2 open reading frame 50##NM_182500|C2orf50|130813|chromosome 2 open reading frame 50##BC120930|C2orf50|130813|chromosome 2 open reading frame 50##AK292828|C2orf50|130813|chromosome 2 open reading frame 50##BC027625|PQLC3|130814|PQ loop repeat containing 3##NM_152391|PQLC3|130814|PQ loop repeat containing 3##AK001091|PQLC3|130814|PQ loop repeat containing 3	0.0	
chr2	167038219	167038329	reg1027530.p1	4.988	+	EU368117 NM_001202435 DQ993522	-32561	-	AB093548 AB093549 AB098335 AY043484 AF225985 NM_001165963 NM_001165964 NM_006920 EU368119	-108120	-	AB073395 TSC_hg19_v1_chr2_-_166810287 AK057268 AK292942 BC055424 NM_024753	-227973	-	TSC_hg19_v1_chr2_-_167232465 AK307549 NM_002977	194206	-	BC141864 M91556 NM_002976	305204	-	AK308450 TSC_hg19_v1_chr2_-_167350647	312342	-	EU368117|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001202435|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB093548|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB093549|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB098335|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AY043484|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AF225985|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001165963|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001165964|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_006920|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##EU368119|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB073395|TTC21B|79809|tetratricopeptide repeat domain 21B##AK057268|TTC21B|79809|tetratricopeptide repeat domain 21B##AK292942|TTC21B|79809|tetratricopeptide repeat domain 21B##BC055424|TTC21B|79809|tetratricopeptide repeat domain 21B##NM_024753|TTC21B|79809|tetratricopeptide repeat domain 21B##AK307549|SCN9A|6335|sodium channel, voltage-gated, type IX, alpha subunit##NM_002977|SCN9A|6335|sodium channel, voltage-gated, type IX, alpha subunit##BC141864|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##M91556|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##NM_002976|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##AK308450|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha	0.918148	CTCF.p2:6:0.918
chr8	133408244	133408348	reg1029186.p1	4.988	+	NM_001145095	-290785	-	AK297911 NM_001080399	-336670	-	BX648595 TSC_hg19_v1_chr8_+_132991247	-417087	+	AK296293 NM_001204824	51212	-	AB208890 AF033347 TSC_hg19_v1_chr8_-_133492689	84327	-	TSC_hg19_v1_chr8_-_133492751 AB527350 BC128576	84491	-	NM_001145095|HHLA1|10086|HERV-H LTR-associating 1##AK297911|OC90|729330|otoconin 90##NM_001080399|OC90|729330|otoconin 90##BX648595|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##AK296293|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##NM_001204824|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3	0.979824	CTCF.p2:-6:0.980
chr1	154934043	154934224	reg1023539.p2	4.987	+	AF289598 AF457208 AB528446 DQ893379 DQ895952 TSC_hg19_v1_chr1_-_154934210 AK092389 AX747515 BC006132 BC032099	-2	-	TSC_hg19_v1_chr1_-_154928604 AK022497 AK300544 AK310712 AK315551	-5522	-	TSC_hg19_v1_chr1_-_154928571 BC016852 NM_020524 AF221521 AK023219 AK303413 AK303863 AK300987	-5554	-	TSC_hg19_v1_chr1_-_154934259 NM_138300	125	-	AB451255 AB451379 AB527815 AK225332 TSC_hg19_v1_chr1_-_154943224 BX647136 U73377 BC011813 BC017283 AK296786 AK096169 BC033925 BX647149 NM_001130040 NM_183001	8991	-	X68148 TSC_hg19_v1_chr1_-_154946815	12679	-	AF289598|PYGO2|90780|pygopus homolog 2 (Drosophila)##AF457208|PYGO2|90780|pygopus homolog 2 (Drosophila)##DQ893379|PYGO2|90780|pygopus homolog 2 (Drosophila)##DQ895952|PYGO2|90780|pygopus homolog 2 (Drosophila)##AK092389|PYGO2|90780|pygopus homolog 2 (Drosophila)##BC006132|PYGO2|90780|pygopus homolog 2 (Drosophila)##BC032099|PYGO2|90780|pygopus homolog 2 (Drosophila)##AK022497|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK300544|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK310712|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK315551|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##BC016852|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##NM_020524|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AF221521|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK023219|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303413|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303863|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK300987|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##NM_138300|PYGO2|90780|pygopus homolog 2 (Drosophila)##AB451255|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AB451379|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AK225332|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BX647136|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##U73377|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BC011813|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BC017283|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AK296786|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AK096169|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BC033925|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BX647149|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##NM_001130040|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##NM_183001|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##X68148|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	0.0	
chr12	45610662	45610811	reg1028053.p5	4.987	+	TSC_hg19_v1_chr12_+_45609916 BC098410	-829	+	TSC_hg19_v1_chr12_+_45609867 AK302819 NM_001142680	-865	+	TSC_hg19_v1_chr12_+_45609845 AK303996	-887	+	AL832340 NM_001142678	75729	+	TSC_hg19_v1_chr12_-_46121280 BC037237 BC008245	510537	-	TSC_hg19_v1_chr12_-_46121531 BC047417	510794	-	BC098410|ANO6|196527|anoctamin 6##AK302819|ANO6|196527|anoctamin 6##NM_001142680|ANO6|196527|anoctamin 6##AK303996|ANO6|196527|anoctamin 6##AL832340|ANO6|196527|anoctamin 6##NM_001142678|ANO6|196527|anoctamin 6##BC037237|LOC400027|400027|uncharacterized LOC400027##BC008245|LOC400027|400027|uncharacterized LOC400027##BC047417|LOC400027|400027|uncharacterized LOC400027	0.0	
chr12	66348446	66348554	reg1027904.p1	4.987	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	-129487	+	TSC_hg19_v1_chr12_+_66218605 AK311399	-129893	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	-130293	+	TSC_hg19_v1_chr12_-_66524536 BC070232 BC006002 BC107780 AK091568 AX747065 NM_032338	176025	-	AB464309 TSC_hg19_v1_chr12_-_66563773 AF182414 AF161526 BC020613 AF113127 AK301359 AF182041 AK075069 AK225158 BC070366 BC052273 BC094852	215254	-	TSC_hg19_v1_chr12_-_66563806 BC004401 NM_016056	215302	-	AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##BC070232|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC006002|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC107780|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AK091568|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##NM_032338|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AF182414|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF161526|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC020613|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF113127|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF182041|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK075069|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK225158|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC070366|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC052273|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC094852|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC004401|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##NM_016056|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4	0.365156	CTCF.p2:-16:0.365
chr13	99128850	99129030	reg1028576.p2	4.987	+	TSC_hg19_v1_chr13_+_99058147 AF339817	-70734	+	AB464689 EU446571 AF539427 BC025388 BC017585 NM_178861	-299435	-	TSC_hg19_v1_chr13_+_98795717 AB008430 BC065020	-333222	+	AF083420 NM_003576	45355	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	100114	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	100182	-	EU446571|RNF113B|140432|ring finger protein 113B##AF539427|RNF113B|140432|ring finger protein 113B##BC025388|RNF113B|140432|ring finger protein 113B##BC017585|RNF113B|140432|ring finger protein 113B##NM_178861|RNF113B|140432|ring finger protein 113B##AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##AF083420|STK24|8428|serine/threonine kinase 24##NM_003576|STK24|8428|serine/threonine kinase 24##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24	0.0	
chr3	151744063	151744244	reg1026715.p1	4.987	+	TSC_hg19_v1_chr3_+_151591430 AK290420 NM_033050 BC030948 AF247785	-152700	+	NM_001086 L32179 BC020706 AK290628 BC032309 CU689322	-212249	+	TSC_hg19_v1_chr3_+_151488214 BC014344	-255923	+	NM_021038 NM_207292	241675	+	TSC_hg19_v1_chr3_+_151986753 BC050535 BC043493	242589	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	243192	-	AK290420|SUCNR1|56670|succinate receptor 1##NM_033050|SUCNR1|56670|succinate receptor 1##BC030948|SUCNR1|56670|succinate receptor 1##AF247785|SUCNR1|56670|succinate receptor 1##NM_001086|AADAC|13|arylacetamide deacetylase (esterase)##L32179|AADAC|13|arylacetamide deacetylase (esterase)##BC020706|AADAC|13|arylacetamide deacetylase (esterase)##AK290628|AADAC|13|arylacetamide deacetylase (esterase)##BC032309|AADAC|13|arylacetamide deacetylase (esterase)##BC014344|LOC201651|201651|arylacetamide deacetylase (esterase) pseudogene##NM_021038|MBNL1|4154|muscleblind-like (Drosophila)##NM_207292|MBNL1|4154|muscleblind-like (Drosophila)##BC050535|MBNL1|4154|muscleblind-like (Drosophila)##BC043493|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093	0.753771	CTCF.p2:12:0.754
chr7	95313509	95313618	reg1028646.p1	4.987	+	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	-87700	-	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-198270	+	TSC_hg19_v1_chr7_-_95064341 AB102891 CU692318 AB591009 L48513 BC040010 AF001602 AF001601 BC073739 AK296029 BC093006 BC046160 AK291103 AK308065 AK315209 AK296636 BC009728 NM_000305 NM_001018161 AK301313	-249202	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	88345	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	637839	-	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	819264	-	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##AB102891|PON2|5445|paraoxonase 2##L48513|PON2|5445|paraoxonase 2##BC040010|PON2|5445|paraoxonase 2##AF001602|PON2|5445|paraoxonase 2##AF001601|PON2|5445|paraoxonase 2##AK296029|PON2|5445|paraoxonase 2##BC093006|PON2|5445|paraoxonase 2##BC046160|PON2|5445|paraoxonase 2##AK291103|PON2|5445|paraoxonase 2##AK308065|PON2|5445|paraoxonase 2##AK315209|PON2|5445|paraoxonase 2##AK296636|PON2|5445|paraoxonase 2##BC009728|PON2|5445|paraoxonase 2##NM_000305|PON2|5445|paraoxonase 2##NM_001018161|PON2|5445|paraoxonase 2##AK301313|PON2|5445|paraoxonase 2##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280	0.0	
chr1	13897550	13897684	reg1033404.p1	4.986	+	BC016048 NM_001010847	-57418	-	NM_001100114	-154816	+	NM_001099852	-160711	+	NM_006474 NM_198389 BC014668 BC022812 TSC_hg19_v1_chr1_+_13910326 AY194238 AK075327 AK075345 AK312607 AF390106 AF030428 AJ225022 AB127958	12772	+	NM_001006624 NM_001006625	14349	+	TSC_hg19_v1_chr1_+_14026688 BC014468 NM_001135610	129107	+	BC016048|LRRC38|126755|leucine rich repeat containing 38##NM_001010847|LRRC38|126755|leucine rich repeat containing 38##NM_001100114|PRAMEF21|391001|PRAME family member 21##NM_001099852|PRAMEF20|645425|PRAME family member 20##NM_006474|PDPN|10630|podoplanin##NM_198389|PDPN|10630|podoplanin##BC014668|PDPN|10630|podoplanin##BC022812|PDPN|10630|podoplanin##AY194238|PDPN|10630|podoplanin##AK075327|PDPN|10630|podoplanin##AK075345|PDPN|10630|podoplanin##AK312607|PDPN|10630|podoplanin##AF390106|PDPN|10630|podoplanin##AF030428|PDPN|10630|podoplanin##AJ225022|PDPN|10630|podoplanin##AB127958|PDPN|10630|podoplanin##NM_001006624|PDPN|10630|podoplanin##NM_001006625|PDPN|10630|podoplanin##BC014468|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001135610|PRDM2|7799|PR domain containing 2, with ZNF domain	0.0	
chr1	154326215	154326328	reg1021532.p3	4.986	+	TSC_hg19_v1_chr1_+_154301249 AK054886	-25015	+	AY302537 NM_020452	-25996	+	TSC_hg19_v1_chr1_+_154298034 NM_001005855 X58235	-28208	+	NM_000565 NM_001206866 NM_181359 X12830 BC089410 TSC_hg19_v1_chr1_+_154377822	51479	+	AK223582 BC132684 BC132686 TSC_hg19_v1_chr1_+_154377856	51581	+	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	51803	+	AK054886|ATP8B2|57198|ATPase, class I, type 8B, member 2##AY302537|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_020452|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_001005855|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_000565|IL6R|3570|interleukin 6 receptor##NM_001206866|IL6R|3570|interleukin 6 receptor##NM_181359|IL6R|3570|interleukin 6 receptor##X12830|IL6R|3570|interleukin 6 receptor##BC089410|IL6R|3570|interleukin 6 receptor##AK223582|IL6R|3570|interleukin 6 receptor##BC132684|IL6R|3570|interleukin 6 receptor##BC132686|IL6R|3570|interleukin 6 receptor##AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor	0.863236	CTCF.p2:-1:0.863
chr12	120672600	120672770	reg1024237.p2	4.986	+	AK001313 AK129823 M17885 TSC_hg19_v1_chr12_-_120638914 NM_001002 NM_053275	-33723	-	AK129754 AK222571 AK304674 BC107717 D28418 TSC_hg19_v1_chr12_-_120638911 AK222468 AK291109	-33775	-	BC019014 BC000087 TSC_hg19_v1_chr12_-_120638906 BC070194	-33784	-	BX648777 NM_025157	15274	-	TSC_hg19_v1_chr12_-_120703534 AK299486 BC136787 BC136794 BC144410 U14588 AB209034 AK298057 AK314204	30829	-	TSC_hg19_v1_chr12_-_120703574 NM_001080855 NM_001243756 NM_002859	30905	-	AK001313|RPLP0|6175|ribosomal protein, large, P0##AK129823|RPLP0|6175|ribosomal protein, large, P0##M17885|RPLP0|6175|ribosomal protein, large, P0##NM_001002|RPLP0|6175|ribosomal protein, large, P0##NM_053275|RPLP0|6175|ribosomal protein, large, P0##AK129754|RPLP0|6175|ribosomal protein, large, P0##AK222571|RPLP0|6175|ribosomal protein, large, P0##AK304674|RPLP0|6175|ribosomal protein, large, P0##BC107717|RPLP0|6175|ribosomal protein, large, P0##D28418|RPLP0|6175|ribosomal protein, large, P0##AK222468|RPLP0|6175|ribosomal protein, large, P0##AK291109|RPLP0|6175|ribosomal protein, large, P0##BC019014|RPLP0|6175|ribosomal protein, large, P0##BC000087|RPLP0|6175|ribosomal protein, large, P0##BC070194|RPLP0|6175|ribosomal protein, large, P0##BX648777|PXN|5829|paxillin##NM_025157|PXN|5829|paxillin##AK299486|PXN|5829|paxillin##BC136787|PXN|5829|paxillin##BC136794|PXN|5829|paxillin##BC144410|PXN|5829|paxillin##U14588|PXN|5829|paxillin##AB209034|PXN|5829|paxillin##AK298057|PXN|5829|paxillin##AK314204|PXN|5829|paxillin##NM_001080855|PXN|5829|paxillin##NM_001243756|PXN|5829|paxillin##NM_002859|PXN|5829|paxillin	0.960698	CTCF.p2:1:0.961
chr13	114906364	114906544	reg1028528.p2	4.986	+	TSC_hg19_v1_chr13_-_114898084 BC047242 BC038456 NM_007368	-8351	-	TSC_hg19_v1_chr13_-_114898058 AK128094	-8388	-	TSC_hg19_v1_chr13_-_114898028 AK295861 AK313795	-8429	-	TSC_hg19_v1_chr13_+_115000360 NM_001078645 NM_003903	93905	+	TSC_hg19_v1_chr13_+_115000402 AK296424 BC017244 BC010875 AK315302 U18291 AB590520 AF164598 CU677877	94008	+	TSC_hg19_v1_chr13_+_115047085 AY013250 NM_023011 NM_080687 BC023569 BC047735 AK294545 AK302003 AF318575	140660	+	BC047242|RASA3|22821|RAS p21 protein activator 3##BC038456|RASA3|22821|RAS p21 protein activator 3##NM_007368|RASA3|22821|RAS p21 protein activator 3##AK128094|RASA3|22821|RAS p21 protein activator 3##AK295861|RASA3|22821|RAS p21 protein activator 3##AK313795|RASA3|22821|RAS p21 protein activator 3##NM_001078645|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##NM_003903|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AK296424|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC017244|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC010875|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AK315302|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##U18291|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AF164598|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AY013250|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_023011|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_080687|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC023569|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC047735|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK294545|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK302003|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AF318575|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)	0.0	
chr17	73860654	73860818	reg1029000.p2	4.986	+	AB464357 CU679759 DQ891052 DQ894231 TSC_hg19_v1_chr17_-_73851417 AK293214 AF087866 BC007452 AK057881 BC010616 AK294082 AK294155 AK300875 NM_012478	-9298	-	TSC_hg19_v1_chr17_-_73840622 BC067084 NM_199242 AK300316	-19952	-	TSC_hg19_v1_chr17_-_73840495 AK024474	-20225	-	TSC_hg19_v1_chr17_-_73874063 BC017299	13327	-	TSC_hg19_v1_chr17_-_73874663 AY026763 NM_033452	13915	-	TSC_hg19_v1_chr17_-_73893051 BC021259 NM_173547	32327	-	DQ891052|WBP2|23558|WW domain binding protein 2##DQ894231|WBP2|23558|WW domain binding protein 2##AK293214|WBP2|23558|WW domain binding protein 2##AF087866|WBP2|23558|WW domain binding protein 2##BC007452|WBP2|23558|WW domain binding protein 2##AK057881|WBP2|23558|WW domain binding protein 2##BC010616|WBP2|23558|WW domain binding protein 2##AK294082|WBP2|23558|WW domain binding protein 2##AK294155|WBP2|23558|WW domain binding protein 2##AK300875|WBP2|23558|WW domain binding protein 2##NM_012478|WBP2|23558|WW domain binding protein 2##BC067084|UNC13D|201294|unc-13 homolog D (C. elegans)##NM_199242|UNC13D|201294|unc-13 homolog D (C. elegans)##AK300316|UNC13D|201294|unc-13 homolog D (C. elegans)##AK024474|UNC13D|201294|unc-13 homolog D (C. elegans)##BC017299|TRIM47|91107|tripartite motif containing 47##AY026763|TRIM47|91107|tripartite motif containing 47##NM_033452|TRIM47|91107|tripartite motif containing 47##BC021259|TRIM65|201292|tripartite motif containing 65##NM_173547|TRIM65|201292|tripartite motif containing 65	0.133204	
chr17	9648310	9648426	reg1025474.p1	4.986	+	BC136368 BC144041 BC171759 AJ583817 NM_153210	-99467	+	NM_001080556 NM_145054 AK074435 AB065281 BC025392 AK094847 AK315679 CU692990	-168391	+	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	-169162	-	BC147024 BC147025 BC171909 NM_001105571 NM_001220493	46245	-	AF105367 BC096261 BC096262 BC096264 NM_004246 BC096263	81014	+	TSC_hg19_v1_chr17_+_9745847 BC041176 BC019818	97491	+	BC136368|USP43|124739|ubiquitin specific peptidase 43##BC144041|USP43|124739|ubiquitin specific peptidase 43##BC171759|USP43|124739|ubiquitin specific peptidase 43##AJ583817|USP43|124739|ubiquitin specific peptidase 43##NM_153210|USP43|124739|ubiquitin specific peptidase 43##NM_001080556|WDR16|146845|WD repeat domain 16##NM_145054|WDR16|146845|WD repeat domain 16##AK074435|WDR16|146845|WD repeat domain 16##AB065281|WDR16|146845|WD repeat domain 16##BC025392|WDR16|146845|WD repeat domain 16##AK094847|WDR16|146845|WD repeat domain 16##AK315679|WDR16|146845|WD repeat domain 16##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8##BC147024|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##BC147025|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##BC171909|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##NM_001105571|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##NM_001220493|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##AF105367|GLP2R|9340|glucagon-like peptide 2 receptor##BC096261|GLP2R|9340|glucagon-like peptide 2 receptor##BC096262|GLP2R|9340|glucagon-like peptide 2 receptor##BC096264|GLP2R|9340|glucagon-like peptide 2 receptor##NM_004246|GLP2R|9340|glucagon-like peptide 2 receptor##BC096263|GLP2R|9340|glucagon-like peptide 2 receptor##BC041176|GLP2R|9340|glucagon-like peptide 2 receptor##BC019818|GLP2R|9340|glucagon-like peptide 2 receptor	0.994248	CTCF.p2:47:0.994
chr19	1223159	1223339	reg1029849.p2	4.986	+	BC146278 BC148727 TSC_hg19_v1_chr19_+_1207211	-16076	+	BC007981 AF035625 BC019334 AK314858 AB209553 EF644172 DQ893232 DQ896561 AB528360 CU675883 U63333 TSC_hg19_v1_chr19_+_1206921	-16558	+	TSC_hg19_v1_chr19_+_1205777 NM_000455 AF217978	-17443	+	BC028156 NM_152769	14665	-	TSC_hg19_v1_chr19_+_1241763 BC002389 BC004426 BC018817 NM_001001975 NM_001687	18503	+	AK094357 S87916 S87918 X63422 X63423 TSC_hg19_v1_chr19_+_1241766	18517	+	BC146278|EFNA2|1943|ephrin-A2##BC148727|EFNA2|1943|ephrin-A2##BC007981|STK11|6794|serine/threonine kinase 11##AF035625|STK11|6794|serine/threonine kinase 11##BC019334|STK11|6794|serine/threonine kinase 11##AK314858|STK11|6794|serine/threonine kinase 11##AB209553|STK11|6794|serine/threonine kinase 11##EF644172|STK11|6794|serine/threonine kinase 11##DQ893232|STK11|6794|serine/threonine kinase 11##DQ896561|STK11|6794|serine/threonine kinase 11##U63333|STK11|6794|serine/threonine kinase 11##NM_000455|STK11|6794|serine/threonine kinase 11##AF217978|STK11|6794|serine/threonine kinase 11##BC028156|C19orf26|255057|chromosome 19 open reading frame 26##NM_152769|C19orf26|255057|chromosome 19 open reading frame 26##BC002389|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC004426|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC018817|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001001975|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001687|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##AK094357|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87916|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87918|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63422|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63423|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	0.999894	CTCF.p2:25:1.000
chr2	194560242	194560346	reg1027783.p1	4.986	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-1500665	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	-1500980	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-1848323	-	BC029413 NM_001127257 CR749813	1961281	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	1961614	+	AB463018 AF327442 AK094515 NM_018897 AB023161	2373201	-	BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7	0.914606	CTCF.p2:-2:0.915
chr2	85765811	85765991	reg1029068.p1	4.986	+	AF450483 NM_198482	-103984	+	TSC_hg19_v1_chr2_-_85641171 AK309290	-124735	-	TSC_hg19_v1_chr2_-_85641140 AK313898 AK300507	-124765	-	NM_005911	199	+	TSC_hg19_v1_chr2_+_85766290 AK294208 AK293841 AK297758 AK297797 AK303877 AK308591 AK311142 AK311612	387	+	TSC_hg19_v1_chr2_+_85766291 AK291126 BC001686 BC001854 X68836 DQ083239 AB529143 CU674832	449	+	AF450483|SH2D6|284948|SH2 domain containing 6##NM_198482|SH2D6|284948|SH2 domain containing 6##AK309290|CAPG|822|capping protein (actin filament), gelsolin-like##AK313898|CAPG|822|capping protein (actin filament), gelsolin-like##AK300507|CAPG|822|capping protein (actin filament), gelsolin-like##NM_005911|MAT2A|4144|methionine adenosyltransferase II, alpha##AK293841|MAT2A|4144|methionine adenosyltransferase II, alpha##AK297758|MAT2A|4144|methionine adenosyltransferase II, alpha##AK297797|MAT2A|4144|methionine adenosyltransferase II, alpha##AK303877|MAT2A|4144|methionine adenosyltransferase II, alpha##AK308591|MAT2A|4144|methionine adenosyltransferase II, alpha##AK291126|MAT2A|4144|methionine adenosyltransferase II, alpha##BC001686|MAT2A|4144|methionine adenosyltransferase II, alpha##BC001854|MAT2A|4144|methionine adenosyltransferase II, alpha##X68836|MAT2A|4144|methionine adenosyltransferase II, alpha##DQ083239|MAT2A|4144|methionine adenosyltransferase II, alpha	0.0	
chr6	72565217	72565362	reg1028583.p1	4.986	+	AK023251 TSC_hg19_v1_chr6_-_72130545	-434789	-	TSC_hg19_v1_chr6_+_71998514 BC110999	-566765	+	TSC_hg19_v1_chr6_+_71998513 BC018688	-566779	+	AB045726 AB051866 TSC_hg19_v1_chr6_+_72596447	31139	+	BC151853 AB002338 BC152435 NM_014989 TSC_hg19_v1_chr6_+_72596658	31364	+	TSC_hg19_v1_chr6_+_72596702 AY190519	31423	+	AK023251|LINC00472|79940|long intergenic non-protein coding RNA 472##BC110999|OGFRL1|79627|opioid growth factor receptor-like 1##BC018688|OGFRL1|79627|opioid growth factor receptor-like 1##AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC151853|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB002338|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC152435|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_014989|RIMS1|22999|regulating synaptic membrane exocytosis 1##AY190519|RIMS1|22999|regulating synaptic membrane exocytosis 1	0.648293	CTCF.p2:-10:0.648
chrUn_gl000242	13520	13586	reg1030641.p1	4.986	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.364614	CTCF.p2:-26:0.365
chr14	50505597	50505777	reg1020738.p3	4.985	+	AK091232 AX746864 NM_001012706	-31450	-	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-145281	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-145854	+	AF390030 NM_001014830	53673	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	77583	-	TSC_hg19_v1_chr14_-_50697940 L13858 HQ258542 AB463275 BC117261 BC143366 BC143367	192296	-	AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D##L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)##HQ258542|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)	0.0	
chr1	15389098	15389229	reg1026913.p1	4.984	+	AY505122 NM_001017999	-116749	+	AY505121 NM_001018001	-132868	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	-138444	+	AK292184 NM_001136216 NM_001136217 TSC_hg19_v1_chr1_+_15479047	89868	+	AK129922 TSC_hg19_v1_chr1_+_15479310	90141	+	TSC_hg19_v1_chr1_+_15480249 AK001061 NM_001136218 NM_018022 BC000593 BC005177 AK098467	91085	+	AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AK292184|TMEM51|55092|transmembrane protein 51##NM_001136216|TMEM51|55092|transmembrane protein 51##NM_001136217|TMEM51|55092|transmembrane protein 51##AK129922|TMEM51|55092|transmembrane protein 51##AK001061|TMEM51|55092|transmembrane protein 51##NM_001136218|TMEM51|55092|transmembrane protein 51##NM_018022|TMEM51|55092|transmembrane protein 51##BC000593|TMEM51|55092|transmembrane protein 51##BC005177|TMEM51|55092|transmembrane protein 51##AK098467|TMEM51|55092|transmembrane protein 51	0.01158	
chr14	105147765	105147884	reg1025032.p1	4.984	+	TSC_hg19_v1_chr14_+_105147469 BC035345	-362	+	AB464314 AK124477 NM_207379	-76736	-	AK095913 NM_001008404 AK297818 AK309489 BC041103	-101738	+	TSC_hg19_v1_chr14_+_105155954 NM_001031714 NM_022489 NM_032714 AK290083 BC006173 BX248757	8060	+	TSC_hg19_v1_chr14_+_105173955 DQ395338 DQ395339 DQ395340	26273	+	BC047904 NM_152328 AK095921 AY037159 TSC_hg19_v1_chr14_+_105190565 BX248286 CU690530	42745	+	AK124477|TMEM179|388021|transmembrane protein 179##NM_207379|TMEM179|388021|transmembrane protein 179##AK095913|C14orf180|400258|chromosome 14 open reading frame 180##NM_001008404|C14orf180|400258|chromosome 14 open reading frame 180##AK297818|C14orf180|400258|chromosome 14 open reading frame 180##AK309489|C14orf180|400258|chromosome 14 open reading frame 180##BC041103|C14orf180|400258|chromosome 14 open reading frame 180##NM_001031714|INF2|64423|inverted formin, FH2 and WH2 domain containing##NM_022489|INF2|64423|inverted formin, FH2 and WH2 domain containing##NM_032714|INF2|64423|inverted formin, FH2 and WH2 domain containing##AK290083|INF2|64423|inverted formin, FH2 and WH2 domain containing##BC006173|INF2|64423|inverted formin, FH2 and WH2 domain containing##BX248757|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395338|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395339|INF2|64423|inverted formin, FH2 and WH2 domain containing##DQ395340|INF2|64423|inverted formin, FH2 and WH2 domain containing##BC047904|ADSSL1|122622|adenylosuccinate synthase like 1##NM_152328|ADSSL1|122622|adenylosuccinate synthase like 1##AK095921|ADSSL1|122622|adenylosuccinate synthase like 1##AY037159|ADSSL1|122622|adenylosuccinate synthase like 1##BX248286|ADSSL1|122622|adenylosuccinate synthase like 1	0.0	
chr16	2009273	2009340	reg1013560.p1	4.984	+	BC050413 NM_005061 U65581 AK313162	-4626	-	TSC_hg19_v1_chr16_-_1993267 NM_016332	-16026	-	TSC_hg19_v1_chr16_-_1993216 AF187272 AF166124 AF161388 AK026128	-16069	-	NM_004548 AF088991 AK311744 TSC_hg19_v1_chr16_+_2009559 AF044954 BC005829 AK291876 BC007509 AF067169	244	+	AB082925 BC019021 BC007700 AB529037 CU677585 CU677775 CU680300 CU689286 DQ892445 DQ895656 BC001795 BC006559 BC008329 BC008862 BC010165 BC012354 BC013833 BC016178 BC016951 BC018993 BC021545 BC023541 BC025677 BC029979 BC032129 BC035427 BC052235 BC063011 BC071673 BC071922 BC071923 BC071924 BC073966 BC075830 BC106060 TSC_hg19_v1_chr16_-_2014765 AB065089 BC068051 BC105985 BC103756	5355	-	AB055772 AK312173 BC066321 NM_002952 X17206 TSC_hg19_v1_chr16_-_2014830	5522	-	BC050413|RPL3L|6123|ribosomal protein L3-like##NM_005061|RPL3L|6123|ribosomal protein L3-like##U65581|RPL3L|6123|ribosomal protein L3-like##AK313162|RPL3L|6123|ribosomal protein L3-like##NM_016332|SEPX1|51734|selenoprotein X, 1##AF187272|SEPX1|51734|selenoprotein X, 1##AF166124|SEPX1|51734|selenoprotein X, 1##AF161388|SEPX1|51734|selenoprotein X, 1##AK026128|SEPX1|51734|selenoprotein X, 1##NM_004548|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##AF088991|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##AK311744|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##AF044954|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##BC005829|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##AK291876|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##BC007509|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##AF067169|NDUFB10|4716|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 10, 22kDa##AB082925|RPS2|6187|ribosomal protein S2##BC019021|RPS2|6187|ribosomal protein S2##DQ892445|RPS2|6187|ribosomal protein S2##DQ895656|RPS2|6187|ribosomal protein S2##BC001795|RPS2|6187|ribosomal protein S2##BC006559|RPS2|6187|ribosomal protein S2##BC008329|RPS2|6187|ribosomal protein S2##BC008862|RPS2|6187|ribosomal protein S2##BC010165|RPS2|6187|ribosomal protein S2##BC012354|RPS2|6187|ribosomal protein S2##BC013833|RPS2|6187|ribosomal protein S2##BC016178|RPS2|6187|ribosomal protein S2##BC016951|RPS2|6187|ribosomal protein S2##BC018993|RPS2|6187|ribosomal protein S2##BC021545|RPS2|6187|ribosomal protein S2##BC023541|RPS2|6187|ribosomal protein S2##BC025677|RPS2|6187|ribosomal protein S2##BC029979|RPS2|6187|ribosomal protein S2##BC032129|RPS2|6187|ribosomal protein S2##BC035427|RPS2|6187|ribosomal protein S2##BC052235|RPS2|6187|ribosomal protein S2##BC063011|RPS2|6187|ribosomal protein S2##BC071673|RPS2|6187|ribosomal protein S2##BC071922|RPS2|6187|ribosomal protein S2##BC071923|RPS2|6187|ribosomal protein S2##BC071924|RPS2|6187|ribosomal protein S2##BC073966|RPS2|6187|ribosomal protein S2##BC075830|RPS2|6187|ribosomal protein S2##BC106060|RPS2|6187|ribosomal protein S2##AB065089|RPS2|6187|ribosomal protein S2##BC068051|RPS2|6187|ribosomal protein S2##BC105985|RPS2|6187|ribosomal protein S2##BC103756|RPS2|6187|ribosomal protein S2##AK312173|RPS2|6187|ribosomal protein S2##BC066321|RPS2|6187|ribosomal protein S2##NM_002952|RPS2|6187|ribosomal protein S2##X17206|RPS2|6187|ribosomal protein S2	0.0	
chr17	53813294	53813406	reg1028644.p1	4.984	+	AK095175 NM_001099640	-3888	-	BC010128 AK001832 NM_018286	-13201	-	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	-314095	-	NM_021213 TSC_hg19_v1_chr17_+_53828339 AF087857 AF151638	15025	+	AK024667 AK314509 TSC_hg19_v1_chr17_+_53828413 BC012084	15071	+	TSC_hg19_v1_chr17_+_53828441 AF114430 NM_001102402 AK058120 BC005112	15250	+	AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##NM_021213|PCTP|58488|phosphatidylcholine transfer protein##AF087857|PCTP|58488|phosphatidylcholine transfer protein##AF151638|PCTP|58488|phosphatidylcholine transfer protein##AK024667|PCTP|58488|phosphatidylcholine transfer protein##AK314509|PCTP|58488|phosphatidylcholine transfer protein##BC012084|PCTP|58488|phosphatidylcholine transfer protein##AF114430|PCTP|58488|phosphatidylcholine transfer protein##NM_001102402|PCTP|58488|phosphatidylcholine transfer protein##AK058120|PCTP|58488|phosphatidylcholine transfer protein##BC005112|PCTP|58488|phosphatidylcholine transfer protein	0.502823	CTCF.p2:5:0.503
chr17	73267347	73267466	reg1023479.p3	4.984	+	TSC_hg19_v1_chr17_-_73267265 AF225422 NM_001242498 NM_020679	-92	-	TSC_hg19_v1_chr17_-_73267251 AK300711	-242	-	DQ890815 DQ893971 CU689726 BC033759 NM_001242500 NM_001242501	-1106	-	BC001075 BC005120 TSC_hg19_v1_chr17_-_73285471 AL833387	18066	-	TSC_hg19_v1_chr17_-_73285501 AK075239 NM_001126121 NM_001126122 NM_021734	18123	-	AB385058 AF498925 CR450363 CR541942 DQ891830 DQ894923 CU674310 L29511 TSC_hg19_v1_chr17_-_73389844	122371	-	AF225422|MIF4GD|57409|MIF4G domain containing##NM_001242498|MIF4GD|57409|MIF4G domain containing##NM_020679|MIF4GD|57409|MIF4G domain containing##AK300711|MIF4GD|57409|MIF4G domain containing##DQ890815|MIF4GD|57409|MIF4G domain containing##DQ893971|MIF4GD|57409|MIF4G domain containing##BC033759|MIF4GD|57409|MIF4G domain containing##NM_001242500|MIF4GD|57409|MIF4G domain containing##NM_001242501|MIF4GD|57409|MIF4G domain containing##BC001075|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC005120|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AL833387|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AK075239|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126121|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126122|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_021734|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AF498925|GRB2|2885|growth factor receptor-bound protein 2##CR450363|GRB2|2885|growth factor receptor-bound protein 2##CR541942|GRB2|2885|growth factor receptor-bound protein 2##DQ891830|GRB2|2885|growth factor receptor-bound protein 2##DQ894923|GRB2|2885|growth factor receptor-bound protein 2##L29511|GRB2|2885|growth factor receptor-bound protein 2	0.728874	CTCF.p2:-41:0.729
chr5	10030717	10030864	reg1030931.p1	4.984	+	BC095521 NM_019599	-400328	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	-484596	-	TSC_hg19_v1_chr5_+_7869306 BC062577	-2161480	+	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	219194	-	AK300042 TSC_hg19_v1_chr5_-_10250001 AK316317 AK055604 AK302012 NM_199133	219215	-	NM_012073 AK302368 TSC_hg19_v1_chr5_+_10250368	219535	+	BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC063406|FAM173B|134145|family with sequence similarity 173, member B##AK300042|FAM173B|134145|family with sequence similarity 173, member B##AK316317|FAM173B|134145|family with sequence similarity 173, member B##AK055604|FAM173B|134145|family with sequence similarity 173, member B##AK302012|FAM173B|134145|family with sequence similarity 173, member B##NM_199133|FAM173B|134145|family with sequence similarity 173, member B##NM_012073|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK302368|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)	0.756081	CTCF.p2:-1:0.756
chr14	106986952	106987086	reg1018427.p2	4.983	+	BX640710 TSC_hg19_v1_chr14_-_106967543 AK097354 AK097357 L22586 AK092384 AK125238 AX747511 AK125703 AK092976 AX747834 AK097028 L06610	-19452	-	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	-19719	-	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	-48561	+	GQ232968 DQ454715 DQ454740 DQ454804 FJ840179 GU552701 FJ840340 GQ232950 GQ232981 GU552754 DQ454538 DQ454540 DQ454585 DQ523858 GU552713 AY003858 DQ454386 DQ454541 DQ454621 DQ454676 GU552719 GU552720 GU552767 AY003800 EF566901 DQ454598 DQ454606 DQ454788 DQ455001 DQ454592 Z11947 FJ873823 FJ873826 FJ873839 FJ873846 FJ873864 FJ873876 FJ873933 FJ873992 HM116214 EF175393 AY003851 EF175424 EU350424 GU358679 JF810268 EU099085 EU099261 AY206990 AF103064 AM279530 HM996031 GQ903512 AF103334 AF062095 AF103183 AF103113 L07311 AF165109 AY062321 HM774774 JN110645 JN110658 JN110671 JN110688 JN110706 JN110718 FJ385349 HM774039 HM774378 HM774566 HM774910 HQ704000 HQ704008 HQ704009 AY062300 HM774238 HM775050 AF103319 AF194121 HM775049 DQ100804 EU146317 EU146347 EU146389 DQ100818 DQ100905 AJ006652 AF485463 AF485473 AY423189 AY423190 AY423196 AY423198 AY423199 AY423207 HM996483 AF103257 AY941883 DQ100909 AF006520 AJ249628 AY866746 DQ187712 DQ524024 GU570284 HM995016 HM995139 HM995190 HM995191 HM995236 HM995887 HM995889 HM995890 HM995891 HM995919 HM996054 HM996304 HM996511 AJ245323 AJ245324 DQ322799 DQ840839 DQ840841 DQ926120 DQ926247 DQ926326 AB374202 AF115123 AF174048 AJ245353 AJ245354 AJ245355 AJ278773 AY640567 AY866807 AY941926 AY944711 DQ100900 DQ100918 DQ926040 DQ926081 DQ926084 DQ926450 DQ926565 DQ926602 DQ926604 EU794403 Z18824 AB021525 AB063673 AB363090 AB363101 AB363126 AB363166 AF021949 AF021979 AF035023 AF052525 AF062215 AF062235 AF129457 AF174081 AF398962 AF408730 AF455546 AF455553 AF471175 AF471178 AF471201 AF471216 AF471265 AF471373 AF471475 AF471476 AF471477 AF471486 AF471490 AF471494 AF471528 AJ239363 AJ239370 AJ389190 AJ413993 AJ627249 AM040520 AM040566 AM259133 AM259134 AY466507 AY866733 AY866738 AY866759 AY866795 AY941854 AY941870 AY941906 AY941952 AY941974 AY941976 AY941980 AY962566 D83682 DQ065617 DQ205182 DQ212502 DQ212503 DQ535300 DQ535366 DQ535419 DQ535472 DQ926167 DQ926385 DQ926389 DQ926413 DQ926426 DQ926459 DQ926557 DQ926616 EF177950 EU549721 FJ492926 GQ903506 GU570336 GU570338 GU570341 HM152510 U00501 U77374 X59703 X87449 Z33898 Z96965 Z98722 AF283800 AJ519241 HM995874 AJ519332 L28051 AJ519250 AJ519294 AY392920 AY393056 L08082 AF062182 AF062206 AF062253 AF062285 AY190818 X81729 Z47218 TSC_hg19_v1_chr14_-_106994347 AK097076 AK097206 AK097859 AK126358 AK128664 AK130501 AK301358 BX640853 BX640854	7155	-	DQ187707 GU552700 GU552764 AY003783 EF175429 FJ694883 EU099078 EU099213 AM183990 EU099124 HM774924 HM774242 JN110729 JN110849 AF103239 FJ385422 FJ385433 HM773968 HM773995 HM774338 HM774389 HM774601 HM774867 HM996424 HQ704020 FJ385411 EU146318 JN110975 AF062300 AF062305 DQ524053 HM994912 HM994914 HM994916 HM994920 HM995673 HM995674 HM995675 HM995676 HM995783 HM995910 HM995945 HM996441 HM996522 AF062299 AF471505 DQ187607 DQ322806 DQ840692 DQ840693 DQ840702 DQ840814 AM279609 DQ926615 EF178081 X99992 AB063924 AB066892 AB066969 AB067011 AB067080 AB067263 AF394199 AF455925 AF459632 AF471500 AF471503 AF471504 AJ300805 AJ579185 AY055477 AY055483 AY640482 AY941852 D83692 DQ005278 DQ005282 DQ100801 DQ926649 GU570351 GU570352 GU570354 L12185 L12186 X64240 Y11898 Z96974 HM995768 AJ519245 AJ519224 AJ519230 AJ519233 AJ519246 AJ519249 AJ519251 AJ519253 AJ519255 HM995877 AJ519222 AJ519299 AY393054 AY393058 AY393158 AY393161 AY190818 Z36887 AY623427 X52894 BC090938 TSC_hg19_v1_chr14_-_107013458	26271	-	TSC_hg19_v1_chr14_-_107013478 AK093806 AK097303 AK125632 AK126320 AK129510 AX748317	26457	-	BX640710|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK097354|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097357|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK092384|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125238|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092976|IGHM|3507|immunoglobulin heavy constant mu##AK097028|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221##AF035023|IGHV3-48|28424|immunoglobulin heavy variable 3-48##AK097076|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097859|IGHM|3507|immunoglobulin heavy constant mu##AK128664|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130501|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640854|IGH@|3492|immunoglobulin heavy locus##AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	1.821933	CTCF.p2:-15:0.878	CTCF.p2:22:0.915
chr14	77444406	77444565	reg1027610.p2	4.983	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-151690	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-165223	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-165275	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	50199	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	50575	-	AK124327 TSC_hg19_v1_chr14_-_77542533	98048	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.0	
chr17	48474905	48475032	reg1028032.p1	4.983	+	TSC_hg19_v1_chr17_-_48474910 AK025328 NM_018509	-56	-	TSC_hg19_v1_chr17_-_48474880 BC017168	-93	-	BC033695 TSC_hg19_v1_chr17_-_48474867	-103	-	AK300625 NM_025149 TSC_hg19_v1_chr17_+_48503578 AK294205 AY358660 BC014123 BC012053	28593	+	TSC_hg19_v1_chr17_+_48503610 AK024573 AK225044 AK225561 AK295258 AK300145 CU680180 CU680788	28646	+	AK311109 TSC_hg19_v1_chr17_+_48545703 AK308584	70731	+	AK025328|LRRC59|55379|leucine rich repeat containing 59##NM_018509|LRRC59|55379|leucine rich repeat containing 59##BC017168|LRRC59|55379|leucine rich repeat containing 59##BC033695|LRRC59|55379|leucine rich repeat containing 59##AK300625|ACSF2|80221|acyl-CoA synthetase family member 2##NM_025149|ACSF2|80221|acyl-CoA synthetase family member 2##AK294205|ACSF2|80221|acyl-CoA synthetase family member 2##AY358660|ACSF2|80221|acyl-CoA synthetase family member 2##BC014123|ACSF2|80221|acyl-CoA synthetase family member 2##BC012053|ACSF2|80221|acyl-CoA synthetase family member 2##AK024573|ACSF2|80221|acyl-CoA synthetase family member 2##AK225044|ACSF2|80221|acyl-CoA synthetase family member 2##AK225561|ACSF2|80221|acyl-CoA synthetase family member 2##AK295258|ACSF2|80221|acyl-CoA synthetase family member 2##AK300145|ACSF2|80221|acyl-CoA synthetase family member 2##AK308584|ACSF2|80221|acyl-CoA synthetase family member 2	0.236645	CTCF.p2:-11:0.237
chr18	48346536	48346696	reg1001364.p2	4.983	+	AB042647 AK054702 AK295666 NM_001127175 NM_001127176 NM_031939	-251	-	TSC_hg19_v1_chr18_+_48086463 BC050299 NM_002747 AK293818 BC040493 AK295058	-260119	+	TSC_hg19_v1_chr18_+_47901415 NM_001039535 NM_145060 BC015706 AK313968 AK303464	-445219	+	BC029860 NM_001127174	5126	-	TSC_hg19_v1_chr18_+_48405434 NM_001168335 NM_002396	58818	+	TSC_hg19_v1_chr18_+_48405496 BC000147 AK313391 M55905	58927	+	AB042647|MRO|83876|maestro##AK054702|MRO|83876|maestro##AK295666|MRO|83876|maestro##NM_001127175|MRO|83876|maestro##NM_001127176|MRO|83876|maestro##NM_031939|MRO|83876|maestro##BC050299|MAPK4|5596|mitogen-activated protein kinase 4##NM_002747|MAPK4|5596|mitogen-activated protein kinase 4##AK293818|MAPK4|5596|mitogen-activated protein kinase 4##BC040493|MAPK4|5596|mitogen-activated protein kinase 4##AK295058|MAPK4|5596|mitogen-activated protein kinase 4##NM_001039535|SKA1|220134|spindle and kinetochore associated complex subunit 1##NM_145060|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC015706|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK313968|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK303464|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC029860|MRO|83876|maestro##NM_001127174|MRO|83876|maestro##NM_001168335|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##NM_002396|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##BC000147|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##AK313391|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##M55905|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial	0.0	
chr19	13263867	13263978	reg1025389.p1	4.983	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-2630	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-2783	-	AF035531 CR457110 NM_003765 CU677875 BC095459 TSC_hg19_v1_chr19_-_13261045 AY778966	-2889	-	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	258	+	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	353254	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	578657	+	BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AF035531|STX10|8677|syntaxin 10##CR457110|STX10|8677|syntaxin 10##NM_003765|STX10|8677|syntaxin 10##BC095459|STX10|8677|syntaxin 10##AY778966|STX10|8677|syntaxin 10##BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130	0.0	
chr2	223184857	223184927	reg1027982.p1	4.983	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	-21367	-	AK057009 NM_153038 BC109388	-21980	+	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	-25872	-	TSC_hg19_v1_chr2_+_223289261 AK314322	104348	+	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	104415	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	335902	-	EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK314322|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit	0.053642	
chr9	77643542	77643708	reg1026897.p2	4.983	+	TSC_hg19_v1_chr9_-_77643332 BC034033 NM_152420	-291	-	TSC_hg19_v1_chr9_-_77643210 AK299691	-415	-	CU689816 EU832520 EU832602 TSC_hg19_v1_chr9_-_77643174	-460	-	BC001366 TSC_hg19_v1_chr9_-_77703070 AK000566 AK097144 AK023413 BC036804 NM_001127603 NM_017881 BC026243	59463	-	TSC_hg19_v1_chr9_+_77703406 NM_012383	59775	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	59885	+	BC034033|C9orf41|138199|chromosome 9 open reading frame 41##NM_152420|C9orf41|138199|chromosome 9 open reading frame 41##AK299691|C9orf41|138199|chromosome 9 open reading frame 41##EU832520|C9orf41|138199|chromosome 9 open reading frame 41##EU832602|C9orf41|138199|chromosome 9 open reading frame 41##BC001366|C9orf95|54981|chromosome 9 open reading frame 95##AK000566|C9orf95|54981|chromosome 9 open reading frame 95##AK097144|C9orf95|54981|chromosome 9 open reading frame 95##AK023413|C9orf95|54981|chromosome 9 open reading frame 95##BC036804|C9orf95|54981|chromosome 9 open reading frame 95##NM_001127603|C9orf95|54981|chromosome 9 open reading frame 95##NM_017881|C9orf95|54981|chromosome 9 open reading frame 95##BC026243|C9orf95|54981|chromosome 9 open reading frame 95##NM_012383|OSTF1|26578|osteoclast stimulating factor 1##AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1	0.0	
chr1	115580379	115580445	reg1038127.p2	4.982	+	NM_000549	-7998	+	NM_003176 BC026162 AK315268 AF273043 BC105299 BC126266 BC144019 BC144020 BC065190 X95654	-182900	+	TSC_hg19_v1_chr1_-_115323268 BC005934 AK024821 AK225734 CR749219 CR936771 AK126316 NM_001102396 NM_025073	-257117	-	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	51704	-	BC032517 NM_002506 X52599	300441	-	NM_001172411 NM_138959 BC065272 AF481859	604180	+	NM_000549|TSHB|7252|thyroid stimulating hormone, beta##NM_003176|SYCP1|6847|synaptonemal complex protein 1##BC026162|SYCP1|6847|synaptonemal complex protein 1##AK315268|SYCP1|6847|synaptonemal complex protein 1##AF273043|SYCP1|6847|synaptonemal complex protein 1##BC105299|SYCP1|6847|synaptonemal complex protein 1##BC126266|SYCP1|6847|synaptonemal complex protein 1##BC144019|SYCP1|6847|synaptonemal complex protein 1##BC144020|SYCP1|6847|synaptonemal complex protein 1##BC065190|SYCP1|6847|synaptonemal complex protein 1##X95654|SYCP1|6847|synaptonemal complex protein 1##BC005934|SIKE1|80143|suppressor of IKBKE 1##AK024821|SIKE1|80143|suppressor of IKBKE 1##AK225734|SIKE1|80143|suppressor of IKBKE 1##CR749219|SIKE1|80143|suppressor of IKBKE 1##CR936771|SIKE1|80143|suppressor of IKBKE 1##AK126316|SIKE1|80143|suppressor of IKBKE 1##NM_001102396|SIKE1|80143|suppressor of IKBKE 1##NM_025073|SIKE1|80143|suppressor of IKBKE 1##AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)	0.0	
chr21	36284562	36284687	reg1029223.p2	4.982	+	TSC_hg19_v1_chr21_-_36260987 BC050363 X79549 D43967 D43968 NM_001001890 NM_001122607	-23643	-	L34598 D10570 TSC_hg19_v1_chr21_-_36260304	-24427	-	AF312386 AF312387 AY004251 TSC_hg19_v1_chr21_-_36259416 S60998	-25212	-	AB384992 AF419247 U19601 BC110828 TSC_hg19_v1_chr21_-_36421376 AK226159	136662	-	BC136380 BC136381 BC144053 TSC_hg19_v1_chr21_-_36421490	136854	-	TSC_hg19_v1_chr21_-_36421575 X90979	136943	-	BC050363|RUNX1|861|runt-related transcription factor 1##X79549|RUNX1|861|runt-related transcription factor 1##D43967|RUNX1|861|runt-related transcription factor 1##D43968|RUNX1|861|runt-related transcription factor 1##NM_001001890|RUNX1|861|runt-related transcription factor 1##NM_001122607|RUNX1|861|runt-related transcription factor 1##L34598|RUNX1|861|runt-related transcription factor 1##D10570|RUNX1|861|runt-related transcription factor 1##S60998|RUNX1|861|runt-related transcription factor 1##U19601|RUNX1|861|runt-related transcription factor 1##BC110828|RUNX1|861|runt-related transcription factor 1##AK226159|RUNX1|861|runt-related transcription factor 1##BC136380|RUNX1|861|runt-related transcription factor 1##BC136381|RUNX1|861|runt-related transcription factor 1##BC144053|RUNX1|861|runt-related transcription factor 1##X90979|RUNX1|861|runt-related transcription factor 1	0.658258	CTCF.p2:-17:0.658
chr19	38717001	38717086	reg1027208.p1	4.981	+	AB463560 GQ358728 BC125152 BC125153 U43843 AK308563 NM_001135155 NM_004647	-2208	-	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	-319131	+	TSC_hg19_v1_chr19_+_38397847 NM_015073	-319186	+	BC021191 TSC_hg19_v1_chr19_-_38720320 NM_001135156	3273	-	TSC_hg19_v1_chr19_-_38720336 AK297581	3291	-	CU676810 DQ892130 DQ895324 BC021089 TSC_hg19_v1_chr19_-_38747015 AF123763 AY050670	29953	-	GQ358728|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125152|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125153|DPF1|8193|D4, zinc and double PHD fingers family 1##U43843|DPF1|8193|D4, zinc and double PHD fingers family 1##AK308563|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135155|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_004647|DPF1|8193|D4, zinc and double PHD fingers family 1##BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1##AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1##DQ892130|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##DQ895324|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##BC021089|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##AF123763|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A##AY050670|PPP1R14A|94274|protein phosphatase 1, regulatory (inhibitor) subunit 14A	0.998915	CTCF.p2:-10:0.999
chr4	807826	807937	reg1027607.p2	4.981	+	TSC_hg19_v1_chr4_-_775606 BC040652 AK055583	-32259	-	TSC_hg19_v1_chr4_+_699570 AK225892 NM_006315 AK057124 AK300290 AK125801	-108251	+	TSC_hg19_v1_chr4_-_683107 AK292010	-124765	-	AK126578 TSC_hg19_v1_chr4_-_819894 AK311921 AB593095 BC002471 NM_006651	12044	-	TSC_hg19_v1_chr4_-_925898 BT007015 D88435	118040	-	BC063606 TSC_hg19_v1_chr4_-_926081 BC008668	118204	-	BC040652|LOC100129917|100129917|uncharacterized LOC100129917##AK055583|LOC100129917|100129917|uncharacterized LOC100129917##AK225892|PCGF3|10336|polycomb group ring finger 3##NM_006315|PCGF3|10336|polycomb group ring finger 3##AK057124|PCGF3|10336|polycomb group ring finger 3##AK300290|PCGF3|10336|polycomb group ring finger 3##AK125801|PCGF3|10336|polycomb group ring finger 3##AK292010|MFSD7|84179|major facilitator superfamily domain containing 7##AK126578|CPLX1|10815|complexin 1##AK311921|CPLX1|10815|complexin 1##AB593095|CPLX1|10815|complexin 1##BC002471|CPLX1|10815|complexin 1##NM_006651|CPLX1|10815|complexin 1##BT007015|GAK|2580|cyclin G associated kinase##D88435|GAK|2580|cyclin G associated kinase##BC063606|GAK|2580|cyclin G associated kinase##BC008668|GAK|2580|cyclin G associated kinase	0.985469	CTCF.p2:2:0.985
chr6	130469471	130469577	reg1029221.p1	4.981	+	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	-129799	+	NM_001010876	-287109	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	-438198	-	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	66931	-	AK091882 AX747235 NM_001017373	74574	-	AB052099 NM_052913	288737	+	AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A	0.095003	
chr10	105742546	105742669	reg1035477.p1	4.980	+	AF273048 NM_014720 BC111565 BC008697	-15120	+	TSC_hg19_v1_chr10_+_105726941 BC047885 BC064804 BC047762 BC036736 D86959	-15643	+	TSC_hg19_v1_chr10_+_105726926 AK307389	-15721	+	AK300117 TSC_hg19_v1_chr10_-_105845560 M91669 AK300226 AK309940	102962	-	BC004478 D63465 TSC_hg19_v1_chr10_-_105845639 NM_000494	103022	-	NM_145247 BC140835 NM_001002759 BC043256 AK291184	139302	+	AF273048|SLK|9748|STE20-like kinase##NM_014720|SLK|9748|STE20-like kinase##BC111565|SLK|9748|STE20-like kinase##BC008697|SLK|9748|STE20-like kinase##BC047885|SLK|9748|STE20-like kinase##BC064804|SLK|9748|STE20-like kinase##BC047762|SLK|9748|STE20-like kinase##BC036736|SLK|9748|STE20-like kinase##D86959|SLK|9748|STE20-like kinase##AK307389|SLK|9748|STE20-like kinase##M91669|COL17A1|1308|collagen, type XVII, alpha 1##AK309940|COL17A1|1308|collagen, type XVII, alpha 1##BC004478|COL17A1|1308|collagen, type XVII, alpha 1##D63465|COL17A1|1308|collagen, type XVII, alpha 1##NM_000494|COL17A1|1308|collagen, type XVII, alpha 1##NM_145247|SFR1|119392|SWI5-dependent recombination repair 1##BC140835|SFR1|119392|SWI5-dependent recombination repair 1##NM_001002759|SFR1|119392|SWI5-dependent recombination repair 1##BC043256|SFR1|119392|SWI5-dependent recombination repair 1##AK291184|SFR1|119392|SWI5-dependent recombination repair 1	0.977861	CTCF.p2:-8:0.978
chr12	78864508	78864604	reg1028715.p1	4.980	+	NM_014903 AJ488201	-639424	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-1405267	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-1591773	-	AK094616 NM_001135805	393216	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	393919	+	TSC_hg19_v1_chr12_+_79258517 BX647240	393980	+	NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I##BX647240|SYT1|6857|synaptotagmin I	0.964308	CTCF.p2:-4:0.953
chr16	71496098	71496278	reg1024528.p1	4.980	+	AK123826 TSC_hg19_v1_chr16_+_71496196	0	+	TSC_hg19_v1_chr16_-_71496127 AF507946 BC007256 NM_145911 BC048974 AK091039 AX746746 AK297130	-67	-	TSC_hg19_v1_chr16_+_71392648 BC015484 X56667	-103544	+	AK292260 BC030658 AK057330 BC047091 NM_006961	27027	-	NM_005769 AF131235 NM_001166395 AK026635 AK074746	63905	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	114784	-	AF507946|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC007256|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_145911|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC048974|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK091039|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK297130|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC015484|CALB2|794|calbindin 2##X56667|CALB2|794|calbindin 2##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19##NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase	0.0	
chr5	176074108	176074218	reg1026629.p2	4.980	+	NM_001099408	-16481	+	S69965 BC002902 TSC_hg19_v1_chr5_-_176057536 JF960950 JF960951 JF960952 JF960953 NM_001001502 NM_003085	-16707	-	TSC_hg19_v1_chr5_-_176037158 BC052950 NM_052899 AB067480	-37026	-	NM_001006616 NM_012171 NM_130465 TSC_hg19_v1_chr5_+_176074470 AY037146	267	+	TSC_hg19_v1_chr5_+_176074497 AK024427 BC067105 BC010405 AF174603 CU679699 CU688248	389	+	TSC_hg19_v1_chr5_+_176237521 AK131380 NM_133369 BC157824	163392	+	NM_001099408|EIF4E1B|253314|eukaryotic translation initiation factor 4E family member 1B##S69965|SNCB|6620|synuclein, beta##BC002902|SNCB|6620|synuclein, beta##JF960950|SNCB|6620|synuclein, beta##JF960951|SNCB|6620|synuclein, beta##JF960952|SNCB|6620|synuclein, beta##JF960953|SNCB|6620|synuclein, beta##NM_001001502|SNCB|6620|synuclein, beta##NM_003085|SNCB|6620|synuclein, beta##BC052950|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1##NM_052899|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1##AB067480|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1##NM_001006616|TSPAN17|26262|tetraspanin 17##NM_012171|TSPAN17|26262|tetraspanin 17##NM_130465|TSPAN17|26262|tetraspanin 17##AY037146|TSPAN17|26262|tetraspanin 17##AK024427|TSPAN17|26262|tetraspanin 17##BC067105|TSPAN17|26262|tetraspanin 17##BC010405|TSPAN17|26262|tetraspanin 17##AF174603|TSPAN17|26262|tetraspanin 17##AK131380|UNC5A|90249|unc-5 homolog A (C. elegans)##NM_133369|UNC5A|90249|unc-5 homolog A (C. elegans)##BC157824|UNC5A|90249|unc-5 homolog A (C. elegans)	0.40155	CTCF.p2:-4:0.369
chr6	11495260	11495420	reg1028033.p2	4.980	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-112800	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-262430	-	L43821 TSC_hg19_v1_chr6_-_11232900	-262440	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	43158	+	NM_001143948 NM_032744	283939	-	NM_002114	517383	+	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1	0.0	
chr1	30579088	30579191	reg1028064.p1	4.979	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-1016091	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-1021692	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-1021759	-	TSC_hg19_v1_chr1_+_31191648 AK057725	612492	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	617293	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	651493	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	0.061041	
chr14	24748932	24749044	reg1028857.p2	4.979	+	TSC_hg19_v1_chr14_-_24740802 NM_182836	-8191	-	TSC_hg19_v1_chr14_-_24740785 AK291347	-8205	-	TSC_hg19_v1_chr14_-_24740748 NM_004581 BC003093	-8230	-	AK058159 NM_138452	19677	-	BC015943 AL833917 BC014057 TSC_hg19_v1_chr14_-_24768965 BX247980 AF418205 NM_001136050	19951	-	TSC_hg19_v1_chr14_+_24769078 AB095941 BC025332 BX647311 BX248018 NM_174913	20099	+	NM_182836|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##AK291347|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##NM_004581|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##BC003093|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##AK058159|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##NM_138452|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##BC015943|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##AL833917|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##BC014057|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##BX247980|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##AF418205|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##NM_001136050|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##AB095941|C14orf21|161424|chromosome 14 open reading frame 21##BC025332|C14orf21|161424|chromosome 14 open reading frame 21##BX647311|C14orf21|161424|chromosome 14 open reading frame 21##BX248018|C14orf21|161424|chromosome 14 open reading frame 21##NM_174913|C14orf21|161424|chromosome 14 open reading frame 21	0.453008	CTCF.p2:17:0.453
chr17	73110410	73110590	reg1003537.p2	4.979	+	TSC_hg19_v1_chr17_+_73106069 AK300997 AK310697 BC011728 NM_024585	-4446	+	TSC_hg19_v1_chr17_+_73084056 BC009684 NM_004695	-26445	+	TSC_hg19_v1_chr17_+_73043325 D79998	-67167	+	TSC_hg19_v1_chr17_-_73127869 CU692564 BC002516 BC022334 BC008183 BC047763 BC017454 AF154829 AK000419 NM_001252377 NM_014595	17357	-	DQ891909 DQ895094 DQ896835 EU176653 CU674698 AF177862 BC001420 TSC_hg19_v1_chr17_-_73150608 AF266846 AK223321 AK312613	40052	-	AY322169 AY322170 NM_001002032 NM_001002033 NM_016185 AF086910	40273	-	AK300997|ARMC7|79637|armadillo repeat containing 7##BC011728|ARMC7|79637|armadillo repeat containing 7##NM_024585|ARMC7|79637|armadillo repeat containing 7##BC009684|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##NM_004695|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##D79998|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic##AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic##DQ891909|HN1|51155|hematological and neurological expressed 1##DQ895094|HN1|51155|hematological and neurological expressed 1##DQ896835|HN1|51155|hematological and neurological expressed 1##EU176653|HN1|51155|hematological and neurological expressed 1##AF177862|HN1|51155|hematological and neurological expressed 1##BC001420|HN1|51155|hematological and neurological expressed 1##AF266846|HN1|51155|hematological and neurological expressed 1##AK223321|HN1|51155|hematological and neurological expressed 1##AK312613|HN1|51155|hematological and neurological expressed 1##AY322169|HN1|51155|hematological and neurological expressed 1##AY322170|HN1|51155|hematological and neurological expressed 1##NM_001002032|HN1|51155|hematological and neurological expressed 1##NM_001002033|HN1|51155|hematological and neurological expressed 1##NM_016185|HN1|51155|hematological and neurological expressed 1##AF086910|HN1|51155|hematological and neurological expressed 1	0.0	
chr1	13038644	13038740	reg1029303.p2	4.978	+	NM_001100631 AB464060	-3147	+	BC101342 NM_001010889	-31287	-	BC144565 NM_001012277	-61214	+	BC130274 BC130276 BC101344 NM_001013407	79050	-	BC144551 NM_001136561	145633	-	AB464060 NM_001100631 NM_001013692	292985	-	NM_001100631|PRAMEF22|653606|PRAME family member 22##BC101342|PRAMEF6|440561|PRAME family member 6##NM_001010889|PRAMEF6|440561|PRAME family member 6##BC144565|PRAMEF7|441871|PRAME family member 7##NM_001012277|PRAMEF7|441871|PRAME family member 7##BC130274|PRAMEF5|343068|PRAME family member 5##BC130276|PRAMEF5|343068|PRAME family member 5##BC101344|PRAMEF5|343068|PRAME family member 5##NM_001013407|PRAMEF5|343068|PRAME family member 5##BC144551|LOC440563|440563|heterogeneous nuclear ribonucleoprotein C-like##NM_001136561|LOC440563|440563|heterogeneous nuclear ribonucleoprotein C-like##NM_001100631|PRAMEF22|653606|PRAME family member 22##NM_001013692|PRAMEF3|401940|PRAME family member 3	0.996976	CTCF.p2:7:0.997
chr14	61753005	61753115	reg1024755.p1	4.978	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-4538	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-4866	-	TSC_hg19_v1_chr14_-_61747957 AK091169 AX746825	-5095	-	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	35467	+	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	409130	+	FJ790247 NM_001243084	411279	+	NM_001017970|TMEM30B|161291|transmembrane protein 30B##AK091169|TMEM30B|161291|transmembrane protein 30B##AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)	0.993701	CTCF.p2:18:0.994
chr19	39348101	39348281	reg1028977.p2	4.978	+	TSC_hg19_v1_chr19_-_39342988 AK292115 NM_001005335 AK301062	-5215	-	AB587509 TSC_hg19_v1_chr19_-_39340622 AB044547 NM_001533	-7566	-	AK298384 TSC_hg19_v1_chr19_-_39340578	-7615	-	TSC_hg19_v1_chr19_-_39368901 AK127808 AK126119 AK298327 NM_001195833 NM_198445	20719	-	TSC_hg19_v1_chr19_+_39390332 NM_001243116 AB362577	42110	+	TSC_hg19_v1_chr19_-_39390229 AK314492 AB009274 AF160214 AY030277 AF095714 AK025876 AK225824 AK054642 AK094810 BC003012 BC003547 AF083107 NM_012237 NM_001193286 NM_030593	42143	-	AK292115|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##NM_001005335|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AK301062|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AB044547|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##NM_001533|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AK298384|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AK127808|RINL|126432|Ras and Rab interactor-like##AK126119|RINL|126432|Ras and Rab interactor-like##AK298327|RINL|126432|Ras and Rab interactor-like##NM_001195833|RINL|126432|Ras and Rab interactor-like##NM_198445|RINL|126432|Ras and Rab interactor-like##NM_001243116|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##AK314492|SIRT2|22933|sirtuin 2##AB009274|SIRT2|22933|sirtuin 2##AF160214|SIRT2|22933|sirtuin 2##AY030277|SIRT2|22933|sirtuin 2##AF095714|SIRT2|22933|sirtuin 2##AK025876|SIRT2|22933|sirtuin 2##AK225824|SIRT2|22933|sirtuin 2##AK054642|SIRT2|22933|sirtuin 2##AK094810|SIRT2|22933|sirtuin 2##BC003012|SIRT2|22933|sirtuin 2##BC003547|SIRT2|22933|sirtuin 2##AF083107|SIRT2|22933|sirtuin 2##NM_012237|SIRT2|22933|sirtuin 2##NM_001193286|SIRT2|22933|sirtuin 2##NM_030593|SIRT2|22933|sirtuin 2	0.0	
chr20	39160887	39161028	reg1027363.p1	4.978	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-1569968	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-1605889	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-1605968	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	156920	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	496537	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	496707	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.937998	CTCF.p2:-10:0.938
chr2	70368481	70368612	reg1011624.p2	4.978	+	TSC_hg19_v1_chr2_+_70314983 BC013020	-53548	+	AK130439 TSC_hg19_v1_chr2_+_70314932	-53629	+	TSC_hg19_v1_chr2_+_70314854 Z29505 X78137 AB464656 CU691762	-53719	+	TSC_hg19_v1_chr2_-_70418137 BC002825 BC005079 AK000565 NM_017880	49575	-	CU677529 AB528896 BC015944 M77142 TSC_hg19_v1_chr2_-_70475711 NM_022037 NM_022173 AK303345	107173	-	TSC_hg19_v1_chr2_+_70485278 NM_016297 AF181490 BC051891 AY359063 BC033815 AK314453 AK225302 AK303043 BC022259 AB020715 DQ890801 DQ893956 CU689758	116704	+	AK130439|PCBP1|5093|poly(rC) binding protein 1##Z29505|PCBP1|5093|poly(rC) binding protein 1##X78137|PCBP1|5093|poly(rC) binding protein 1##BC002825|C2orf42|54980|chromosome 2 open reading frame 42##BC005079|C2orf42|54980|chromosome 2 open reading frame 42##AK000565|C2orf42|54980|chromosome 2 open reading frame 42##NM_017880|C2orf42|54980|chromosome 2 open reading frame 42##BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_016297|PCYOX1|51449|prenylcysteine oxidase 1##AF181490|PCYOX1|51449|prenylcysteine oxidase 1##BC051891|PCYOX1|51449|prenylcysteine oxidase 1##AY359063|PCYOX1|51449|prenylcysteine oxidase 1##BC033815|PCYOX1|51449|prenylcysteine oxidase 1##AK314453|PCYOX1|51449|prenylcysteine oxidase 1##AK225302|PCYOX1|51449|prenylcysteine oxidase 1##AK303043|PCYOX1|51449|prenylcysteine oxidase 1##BC022259|PCYOX1|51449|prenylcysteine oxidase 1##AB020715|PCYOX1|51449|prenylcysteine oxidase 1##DQ890801|PCYOX1|51449|prenylcysteine oxidase 1##DQ893956|PCYOX1|51449|prenylcysteine oxidase 1	0.0	
chr4	146950413	146950553	reg1028877.p2	4.978	+	BC033879 TSC_hg19_v1_chr4_-_146859976	-90515	-	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	-90806	-	NM_001080531	-349128	+	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	146384	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	492513	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	609608	+	AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827##NM_001080531|C4orf51|646603|chromosome 4 open reading frame 51##NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2	0.0	
chr8	103425226	103425407	reg1026314.p2	4.978	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-405	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-174143	-	NM_001040630	-288182	-	NM_024410 AK315276 BC104456 BC104457	138545	+	BC011538 NM_001032282 S81439	240776	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	242616	-	AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001040630|NCALD|83988|neurocalcin delta##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10	0.0	
chr8	79764369	79764549	reg1020128.p1	4.978	+	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	-46811	-	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	-186139	+	NM_006823 NM_181839 S76965	-336124	+	NM_001199214 NM_007029	758589	+	TSC_hg19_v1_chr8_+_80523304 D50375	758849	+	AK299500 TSC_hg19_v1_chr8_+_80523339	758880	+	J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7##NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_001199214|STMN2|11075|stathmin-like 2##NM_007029|STMN2|11075|stathmin-like 2##D50375|STMN2|11075|stathmin-like 2##AK299500|STMN2|11075|stathmin-like 2	0.98963	
chr22	44568401	44568529	reg1028258.p1	4.977	+	BC039811 NM_001243385	-103469	+	AK308443 NM_001243386	-146282	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	-148266	+	NM_001137605 AK309348 AK293360	391	+	NM_022141 AK225929 AK307294 BC034406 AF237772	8347	+	AK307299 TSC_hg19_v1_chr22_+_44577227 AK311264	8759	+	BC039811|PARVB|29780|parvin, beta##NM_001243385|PARVB|29780|parvin, beta##AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##NM_001137605|PARVG|64098|parvin, gamma##AK309348|PARVG|64098|parvin, gamma##AK293360|PARVG|64098|parvin, gamma##NM_022141|PARVG|64098|parvin, gamma##AK225929|PARVG|64098|parvin, gamma##AK307294|PARVG|64098|parvin, gamma##BC034406|PARVG|64098|parvin, gamma##AF237772|PARVG|64098|parvin, gamma##AK307299|PARVG|64098|parvin, gamma	0.0	
chr10	103892316	103892431	reg1025976.p1	4.975	+	TSC_hg19_v1_chr10_-_103879963 NM_001113407	-12230	-	TSC_hg19_v1_chr10_-_103874760 BC000482 BC009246 NM_003893	-17645	-	AK300588 TSC_hg19_v1_chr10_-_103874641	-17754	-	AF325193 NM_015062 TSC_hg19_v1_chr10_+_103892796 AK299885 BC063806 AB011167 BC063829 AK095248 AB384505	432	+	NM_004741 TSC_hg19_v1_chr10_+_103912145 Z34289 AK225101 AK314363 AK056755 BC001883 BC006769 DQ891862 DQ895051 AY820769 D21262	19678	+	BC034344 NM_152310	93769	+	NM_001113407|LDB1|8861|LIM domain binding 1##BC000482|LDB1|8861|LIM domain binding 1##BC009246|LDB1|8861|LIM domain binding 1##NM_003893|LDB1|8861|LIM domain binding 1##AK300588|LDB1|8861|LIM domain binding 1##AF325193|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##NM_015062|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AK299885|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC063806|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AB011167|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC063829|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AK095248|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##NM_004741|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##Z34289|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK225101|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK314363|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK056755|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC001883|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC006769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##DQ891862|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##DQ895051|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AY820769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##D21262|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC034344|ELOVL3|83401|ELOVL fatty acid elongase 3##NM_152310|ELOVL3|83401|ELOVL fatty acid elongase 3	0.987709	CTCF.p2:17:0.988
chr11	67276281	67276462	reg1025961.p3	4.975	+	BC002850 NM_005851 AK308725 TSC_hg19_v1_chr11_-_67276169	-232	-	TSC_hg19_v1_chr11_-_67275634 BT006909 CR457050 CR542042 AK310197 AK001498 BC016704 AF089814	-738	-	TSC_hg19_v1_chr11_-_67272835 AF334584 BC022230 NM_001130848 NM_004910	-3538	-	AB528802 AF169154 BC018476 NM_016366	14477	-	NM_000852 TSC_hg19_v1_chr11_+_67351145	74735	+	TSC_hg19_v1_chr11_+_67351285 AY887902 BC010915 BC044846 X15480 U62589 U30897	74918	+	BC002850|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##NM_005851|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BT006909|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR457050|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR542042|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK310197|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK001498|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BC016704|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AF089814|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AF334584|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##BC022230|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##NM_001130848|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##NM_004910|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##AF169154|CABP2|51475|calcium binding protein 2##BC018476|CABP2|51475|calcium binding protein 2##NM_016366|CABP2|51475|calcium binding protein 2##NM_000852|GSTP1|2950|glutathione S-transferase pi 1##BC010915|GSTP1|2950|glutathione S-transferase pi 1##BC044846|GSTP1|2950|glutathione S-transferase pi 1##X15480|GSTP1|2950|glutathione S-transferase pi 1##U62589|GSTP1|2950|glutathione S-transferase pi 1##U30897|GSTP1|2950|glutathione S-transferase pi 1	0.0	
chr12	52285797	52285915	reg1027010.p1	4.975	+	AK125517 BC121152 NM_001130015 NM_182608 BC121153 AF517108 AF517109 BX537908 BX640656 BX647684 BX649168	-3961	+	AK129980 NM_001013690	-60156	-	NM_001177984 AF225988 FJ611941	-229282	+	HM161905 TSC_hg19_v1_chr12_+_52300731 HM161906	14855	+	NM_000020 Z22533 TSC_hg19_v1_chr12_+_52301290 AK298493	15393	+	NM_001077401 AK303331 L17075 BC042637 CU692110	20328	+	AK125517|ANKRD33|341405|ankyrin repeat domain 33##BC121152|ANKRD33|341405|ankyrin repeat domain 33##NM_001130015|ANKRD33|341405|ankyrin repeat domain 33##NM_182608|ANKRD33|341405|ankyrin repeat domain 33##BC121153|ANKRD33|341405|ankyrin repeat domain 33##AF517108|ANKRD33|341405|ankyrin repeat domain 33##AF517109|ANKRD33|341405|ankyrin repeat domain 33##BX537908|ANKRD33|341405|ankyrin repeat domain 33##BX640656|ANKRD33|341405|ankyrin repeat domain 33##BX647684|ANKRD33|341405|ankyrin repeat domain 33##BX649168|ANKRD33|341405|ankyrin repeat domain 33##AK129980|FIGNL2|401720|fidgetin-like 2##NM_001013690|FIGNL2|401720|fidgetin-like 2##NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##HM161905|ACVRL1|94|activin A receptor type II-like 1##HM161906|ACVRL1|94|activin A receptor type II-like 1##NM_000020|ACVRL1|94|activin A receptor type II-like 1##Z22533|ACVRL1|94|activin A receptor type II-like 1##AK298493|ACVRL1|94|activin A receptor type II-like 1##NM_001077401|ACVRL1|94|activin A receptor type II-like 1##AK303331|ACVRL1|94|activin A receptor type II-like 1##L17075|ACVRL1|94|activin A receptor type II-like 1##BC042637|ACVRL1|94|activin A receptor type II-like 1	0.0	
chr6	20320244	20320424	reg1028976.p2	4.975	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	-107662	-	TSC_hg19_v1_chr6_+_19838612 AF085889	-481651	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	-482699	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	81769	+	CR749285 NM_001243076	83699	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	214389	+	BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1	0.0	
chrX	77154670	77154847	reg1028575.p1	4.975	+	CU687464 CU687640 EU831642 EU831726 BC041014 TSC_hg19_v1_chrX_-_77150929 AY358691 BC060842 AK075394 AK223131 AK296743 AK314309 AL136636 DQ000004 BC050657 BC063037 AK172735 NM_032121 AK294943	-3760	-	TSC_hg19_v1_chrX_-_77041703 AB208928 AK308419 AK307791 U72936 U72937 U72938 NM_000489 NM_138270	-113032	-	AB102641 BT007188 TSC_hg19_v1_chrX_-_77041551 BC002521	-113227	-	TSC_hg19_v1_chrX_+_77154964 NM_001866 Z14244 BC018386 AK311879 DQ890544 EU176472 BT009767 CR450332 CR542124	245	+	TSC_hg19_v1_chrX_+_77166193 AK310748 NM_000052 L06133	11435	+	AB117973 TSC_hg19_v1_chrX_+_77166237 AK096667 AB208828	11484	+	EU831642|MAGT1|84061|magnesium transporter 1##EU831726|MAGT1|84061|magnesium transporter 1##BC041014|MAGT1|84061|magnesium transporter 1##AY358691|MAGT1|84061|magnesium transporter 1##BC060842|MAGT1|84061|magnesium transporter 1##AK075394|MAGT1|84061|magnesium transporter 1##AK223131|MAGT1|84061|magnesium transporter 1##AK296743|MAGT1|84061|magnesium transporter 1##AK314309|MAGT1|84061|magnesium transporter 1##AL136636|MAGT1|84061|magnesium transporter 1##DQ000004|MAGT1|84061|magnesium transporter 1##BC050657|MAGT1|84061|magnesium transporter 1##BC063037|MAGT1|84061|magnesium transporter 1##AK172735|MAGT1|84061|magnesium transporter 1##NM_032121|MAGT1|84061|magnesium transporter 1##AK294943|MAGT1|84061|magnesium transporter 1##AB208928|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##AK308419|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##AK307791|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##U72936|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##U72937|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##U72938|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##NM_000489|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##NM_138270|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##AB102641|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##BT007188|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##BC002521|ATRX|546|alpha thalassemia/mental retardation syndrome X-linked##NM_001866|COX7B|1349|cytochrome c oxidase subunit VIIb##Z14244|COX7B|1349|cytochrome c oxidase subunit VIIb##BC018386|COX7B|1349|cytochrome c oxidase subunit VIIb##AK311879|COX7B|1349|cytochrome c oxidase subunit VIIb##DQ890544|COX7B|1349|cytochrome c oxidase subunit VIIb##EU176472|COX7B|1349|cytochrome c oxidase subunit VIIb##BT009767|COX7B|1349|cytochrome c oxidase subunit VIIb##CR450332|COX7B|1349|cytochrome c oxidase subunit VIIb##CR542124|COX7B|1349|cytochrome c oxidase subunit VIIb##NM_000052|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##L06133|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##AB117973|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide##AB208828|ATP7A|538|ATPase, Cu++ transporting, alpha polypeptide	0.0	
chr10	14367486	14367586	reg1025968.p1	4.974	+	TSC_hg19_v1_chr10_-_14050453 AK001072	-317044	-	TSC_hg19_v1_chr10_-_13749648 AK057828	-617847	-	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-738549	+	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	5314	-	TSC_hg19_v1_chr10_-_14646259 BC064407	278781	-	TSC_hg19_v1_chr10_-_14646423 BC072452	278893	-	AK001072|FRMD4A|55691|FERM domain containing 4A##AK057828|FRMD4A|55691|FERM domain containing 4A##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B	0.054538	
chr10	7798500	7798606	reg1027225.p1	4.974	+	TSC_hg19_v1_chr10_+_7745360 AK225277	-53176	+	TSC_hg19_v1_chr10_+_7745343 BC132685	-53209	+	TSC_hg19_v1_chr10_+_7745330 AK225329 AK297334 X07173	-53221	+	BC017309 TSC_hg19_v1_chr10_-_7829957 AK309059 NM_012311 AK296637 AK301789	31394	-	TSC_hg19_v1_chr10_+_7830141 NM_001001973 NM_005174 BC000931 BC020824 AK292896 AK296803 D16562 D16563 BC016812 AK294061 BC010380 BC000470 BC013394 BC013865 CU677727 CR457403 BC026049	31587	+	TSC_hg19_v1_chr10_+_7860467 BC105593 BC073884 BC017320 BC045106 AK307657 AK307521 BC062352 BC028077	61923	+	AK225277|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##BC132685|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##AK225329|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##AK297334|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##X07173|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##BC017309|KIN|22944|KIN, antigenic determinant of recA protein homolog (mouse)##AK309059|KIN|22944|KIN, antigenic determinant of recA protein homolog (mouse)##NM_012311|KIN|22944|KIN, antigenic determinant of recA protein homolog (mouse)##AK296637|KIN|22944|KIN, antigenic determinant of recA protein homolog (mouse)##AK301789|KIN|22944|KIN, antigenic determinant of recA protein homolog (mouse)##NM_001001973|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##NM_005174|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC000931|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC020824|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##AK292896|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##AK296803|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##D16562|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##D16563|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC016812|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##AK294061|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC010380|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC000470|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC013394|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC013865|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##CR457403|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC026049|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC105593|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC073884|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC017320|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC045106|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##AK307657|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##AK307521|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC062352|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC028077|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa	0.9662	CTCF.p2:-1:0.966
chr11	64846653	64846825	reg1001111.p2	4.974	+	AB527189 TSC_hg19_v1_chr11_-_64826007 AJ012371 NM_005468 BC143643 BC143644	-20737	-	TSC_hg19_v1_chr11_+_64808404 BC007448 U79266	-38321	+	NM_013299 TSC_hg19_v1_chr11_+_64808377	-38358	+	DQ893251 DQ896580 TSC_hg19_v1_chr11_-_64851515 BC011000 AK291490	4761	-	TSC_hg19_v1_chr11_-_64851564 NM_080668	4846	-	TSC_hg19_v1_chr11_+_64851693 NM_006782 AF030291 AF001891 AK295279 AK316044 AK291964 AK308740	4967	+	AJ012371|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##NM_005468|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC143643|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC143644|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC007448|SAC3D1|29901|SAC3 domain containing 1##U79266|SAC3D1|29901|SAC3 domain containing 1##NM_013299|SAC3D1|29901|SAC3 domain containing 1##DQ893251|CDCA5|113130|cell division cycle associated 5##DQ896580|CDCA5|113130|cell division cycle associated 5##BC011000|CDCA5|113130|cell division cycle associated 5##AK291490|CDCA5|113130|cell division cycle associated 5##NM_080668|CDCA5|113130|cell division cycle associated 5##NM_006782|ZFPL1|7542|zinc finger protein-like 1##AF030291|ZFPL1|7542|zinc finger protein-like 1##AF001891|ZFPL1|7542|zinc finger protein-like 1##AK295279|ZFPL1|7542|zinc finger protein-like 1##AK316044|ZFPL1|7542|zinc finger protein-like 1##AK291964|ZFPL1|7542|zinc finger protein-like 1##AK308740|ZFPL1|7542|zinc finger protein-like 1	0.0	
chr14	94370019	94370120	reg1028377.p1	4.974	+	AY225516 AY225517 NM_178013	-115304	-	AY161004 NM_182971 BC101125 BC101126	-556521	+	AK125327 NM_020818	-570505	+	NM_001207071 NM_138344 AK093387 AX748092	15179	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	23639	+	AB056723 NM_016150	53697	-	AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##AY161004|COX8C|341947|cytochrome c oxidase subunit VIIIC##NM_182971|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101125|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101126|COX8C|341947|cytochrome c oxidase subunit VIIIC##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A##AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2	0.999079	CTCF.p2:0:0.999
chr16	30946608	30946724	reg1025754.p2	4.974	+	TSC_hg19_v1_chr16_+_30937206 BC059173	-9457	+	AK302669 NM_001099784	-10771	+	TSC_hg19_v1_chr16_-_30934469 BC101464 BC101988 BC105687 BC105926 AK092263 AX747439	-12153	-	TSC_hg19_v1_chr16_+_30960389 NM_152288	13726	+	TSC_hg19_v1_chr16_+_30960425 BC015555	13755	+	TSC_hg19_v1_chr16_+_30960437 AK298276 BC006126 BC016150 BC022786	13781	+	BC059173|FBXL19|54620|F-box and leucine-rich repeat protein 19##AK302669|FBXL19|54620|F-box and leucine-rich repeat protein 19##NM_001099784|FBXL19|54620|F-box and leucine-rich repeat protein 19##BC101464|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC101988|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC105687|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC105926|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##AK092263|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##NM_152288|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC015555|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##AK298276|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC006126|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC016150|ORAI3|93129|ORAI calcium release-activated calcium modulator 3##BC022786|ORAI3|93129|ORAI calcium release-activated calcium modulator 3	0.519593	CTCF.p2:-9:0.342
chr20	47463518	47463698	reg1028876.p2	4.974	+	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	-19169	-	AB037836 TSC_hg19_v1_chr20_-_47444291	-19322	-	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-1048290	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	74710	+	TSC_hg19_v1_chr20_+_47662853 BC108309 NM_001316 AF053641 U33286 AK312306 AK307965 AK297270 AK297314 AK298477 AK300589 BC109313 BC109314	199218	+	TSC_hg19_v1_chr20_+_47662875 AF053640	199280	+	AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC108309|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##NM_001316|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053641|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##U33286|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK312306|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK307965|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297270|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK298477|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK300589|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109313|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053640|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)	0.0	
chr2	10442692	10442808	reg1032999.p2	4.974	+	BC093999 BC094001 NM_182626	-160771	+	TSC_hg19_v1_chr2_+_10262865 NM_001034 AK092671 AK123010 AK313719 BC030154 BC001886 DQ891863 DQ895052 AB529158	-179861	+	NM_001165931 S40301 X59618 TSC_hg19_v1_chr2_+_10262805	-179991	+	TSC_hg19_v1_chr2_+_10443043 BC017482 NM_002149 BC009846 BC017028	299	+	AK000596 NM_134421	1075	+	D28365 BC014562 BC025296 X55362 TSC_hg19_v1_chr2_-_10588440	145610	-	BC093999|C2orf48|348738|chromosome 2 open reading frame 48##BC094001|C2orf48|348738|chromosome 2 open reading frame 48##NM_182626|C2orf48|348738|chromosome 2 open reading frame 48##NM_001034|RRM2|6241|ribonucleotide reductase M2##AK092671|RRM2|6241|ribonucleotide reductase M2##AK123010|RRM2|6241|ribonucleotide reductase M2##AK313719|RRM2|6241|ribonucleotide reductase M2##BC030154|RRM2|6241|ribonucleotide reductase M2##BC001886|RRM2|6241|ribonucleotide reductase M2##DQ891863|RRM2|6241|ribonucleotide reductase M2##DQ895052|RRM2|6241|ribonucleotide reductase M2##NM_001165931|RRM2|6241|ribonucleotide reductase M2##S40301|RRM2|6241|ribonucleotide reductase M2##X59618|RRM2|6241|ribonucleotide reductase M2##BC017482|HPCAL1|3241|hippocalcin-like 1##NM_002149|HPCAL1|3241|hippocalcin-like 1##BC009846|HPCAL1|3241|hippocalcin-like 1##BC017028|HPCAL1|3241|hippocalcin-like 1##AK000596|HPCAL1|3241|hippocalcin-like 1##NM_134421|HPCAL1|3241|hippocalcin-like 1##D28365|ODC1|4953|ornithine decarboxylase 1##BC014562|ODC1|4953|ornithine decarboxylase 1##BC025296|ODC1|4953|ornithine decarboxylase 1##X55362|ODC1|4953|ornithine decarboxylase 1	0.012985	
chr3	194850338	194850518	reg1022013.p1	4.974	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-442925	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-443805	+	NM_018385	-457223	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	141422	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	313274	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	419685	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.108621	
chr7	6310713	6310894	reg1028726.p1	4.974	+	TSC_hg19_v1_chr7_+_6144605 AK022759 AY618868 BC060846 AK309375	-166205	+	TSC_hg19_v1_chr7_+_6144564 NM_032172 AK298164	-166260	+	TSC_hg19_v1_chr7_-_6098822 NM_001134335 NM_014413	-211956	-	AB528964 DQ891736 DQ894912 EU176610 AJ223957 TSC_hg19_v1_chr7_-_6312242 AJ005197 NM_004227 AK313728 BC028717	1428	-	TSC_hg19_v1_chr7_-_6388581 AK311878 AF533707 BC006110 NM_001037163 BC142977	77707	-	TSC_hg19_v1_chr7_+_6414179 NM_006908 NM_018890 AK054993 BC107748 AK291806 AB209410 BC050687 AK291815 AY279384 BC004247 AB451238 AB451363 AB464133 AF136373 AF498964 AJ132694 BT007121 CU690768 EU831965 EU832058 EU832640 EU832717 M29870 M31467	103424	+	AK022759|USP42|84132|ubiquitin specific peptidase 42##AY618868|USP42|84132|ubiquitin specific peptidase 42##BC060846|USP42|84132|ubiquitin specific peptidase 42##AK309375|USP42|84132|ubiquitin specific peptidase 42##NM_032172|USP42|84132|ubiquitin specific peptidase 42##AK298164|USP42|84132|ubiquitin specific peptidase 42##NM_001134335|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##NM_014413|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##DQ891736|CYTH3|9265|cytohesin 3##DQ894912|CYTH3|9265|cytohesin 3##EU176610|CYTH3|9265|cytohesin 3##AJ223957|CYTH3|9265|cytohesin 3##AJ005197|CYTH3|9265|cytohesin 3##NM_004227|CYTH3|9265|cytohesin 3##AK313728|CYTH3|9265|cytohesin 3##BC028717|CYTH3|9265|cytohesin 3##AK311878|C7orf70|84792|chromosome 7 open reading frame 70##AF533707|C7orf70|84792|chromosome 7 open reading frame 70##BC006110|C7orf70|84792|chromosome 7 open reading frame 70##NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70##BC142977|C7orf70|84792|chromosome 7 open reading frame 70##NM_006908|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##NM_018890|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK054993|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC107748|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291806|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB209410|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC050687|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291815|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AY279384|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC004247|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451238|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451363|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF136373|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF498964|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AJ132694|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BT007121|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU831965|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832058|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832640|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832717|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M29870|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M31467|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	0.0	
chr10	13560194	13560293	reg1028146.p1	4.973	+	BC031618 AK097602 NM_001100912 NM_152751	-15284	-	TSC_hg19_v1_chr10_-_13390214 U34044 BC063816 GU954545 GU954546 GU954547 GU954548 GU954549 NM_001195602 NM_001195604 NM_012247	-169976	-	TSC_hg19_v1_chr10_-_13390036 AK301568 AK309829	-170204	-	NM_003675 TSC_hg19_v1_chr10_+_13628948	68700	+	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	68744	+	TSC_hg19_v1_chr10_-_13749648 AK057828	189446	-	BC031618|BEND7|222389|BEN domain containing 7##AK097602|BEND7|222389|BEN domain containing 7##NM_001100912|BEND7|222389|BEN domain containing 7##NM_152751|BEND7|222389|BEN domain containing 7##U34044|SEPHS1|22929|selenophosphate synthetase 1##BC063816|SEPHS1|22929|selenophosphate synthetase 1##GU954545|SEPHS1|22929|selenophosphate synthetase 1##GU954546|SEPHS1|22929|selenophosphate synthetase 1##GU954547|SEPHS1|22929|selenophosphate synthetase 1##GU954548|SEPHS1|22929|selenophosphate synthetase 1##GU954549|SEPHS1|22929|selenophosphate synthetase 1##NM_001195602|SEPHS1|22929|selenophosphate synthetase 1##NM_001195604|SEPHS1|22929|selenophosphate synthetase 1##NM_012247|SEPHS1|22929|selenophosphate synthetase 1##AK301568|SEPHS1|22929|selenophosphate synthetase 1##AK309829|SEPHS1|22929|selenophosphate synthetase 1##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK057828|FRMD4A|55691|FERM domain containing 4A	0.182746	
chr11	118661896	118662057	reg1029168.p1	4.973	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-42	-	TSC_hg19_v1_chr11_-_118661865 Z11685	-97	-	TSC_hg19_v1_chr11_-_118661860 BC026228	-117	-	AK291512 NM_001716 BC110352 X68149 AB464488	92584	+	NM_032966 X68829	102124	+	AB094091 NM_182557	119636	-	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like	0.031967	
chr12	14998537	14998655	reg1001597.p2	4.973	+	AY829433 AY829434 NM_021071 AK291662 TSC_hg19_v1_chr12_-_14996461	-2172	-	BC132752 BC132754 AK092637 AX747644 NM_001013698	-31493	-	BC038836 NM_175874 AK289942 AK056213 BC015546 BC029443	-42020	+	BT006733 CR450358 DQ892495 DQ895707 X07362 AY542304 M58549 BC070314 X53331 BC005272 AK310040 AK312029 BC093078 TSC_hg19_v1_chr12_-_15038794 NM_000900 NM_001190839	40192	-	CU688844 BC030218 AY358536 NM_152321 AK056677	92865	-	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	115952	-	AY829433|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##AY829434|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##NM_021071|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##AK291662|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##BC132752|C12orf69|440087|chromosome 12 open reading frame 69##BC132754|C12orf69|440087|chromosome 12 open reading frame 69##AK092637|C12orf69|440087|chromosome 12 open reading frame 69##NM_001013698|C12orf69|440087|chromosome 12 open reading frame 69##BC038836|C12orf60|144608|chromosome 12 open reading frame 60##NM_175874|C12orf60|144608|chromosome 12 open reading frame 60##AK289942|C12orf60|144608|chromosome 12 open reading frame 60##AK056213|C12orf60|144608|chromosome 12 open reading frame 60##BC015546|C12orf60|144608|chromosome 12 open reading frame 60##BC029443|C12orf60|144608|chromosome 12 open reading frame 60##BT006733|MGP|4256|matrix Gla protein##CR450358|MGP|4256|matrix Gla protein##DQ892495|MGP|4256|matrix Gla protein##DQ895707|MGP|4256|matrix Gla protein##X07362|MGP|4256|matrix Gla protein##AY542304|MGP|4256|matrix Gla protein##M58549|MGP|4256|matrix Gla protein##BC070314|MGP|4256|matrix Gla protein##X53331|MGP|4256|matrix Gla protein##BC005272|MGP|4256|matrix Gla protein##AK312029|MGP|4256|matrix Gla protein##BC093078|MGP|4256|matrix Gla protein##NM_000900|MGP|4256|matrix Gla protein##NM_001190839|MGP|4256|matrix Gla protein##BC030218|ERP27|121506|endoplasmic reticulum protein 27##AY358536|ERP27|121506|endoplasmic reticulum protein 27##NM_152321|ERP27|121506|endoplasmic reticulum protein 27##AK056677|ERP27|121506|endoplasmic reticulum protein 27##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta	0.0	
chr14	68715503	68715681	reg1004559.p2	4.973	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-429072	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-432293	-	AK315462 NM_152443	-546990	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	544128	-	NM_001244698 NM_004926	545038	-	NM_001244701 AB528867	547392	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.622042	CTCF.p2:-32:0.622
chr14	69941964	69942097	reg1023874.p1	4.973	+	TSC_hg19_v1_chr14_+_69865419 BC047682	-76594	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	-76635	+	NM_001252151 NM_001252152 AK293222 AK316381 TSC_hg19_v1_chr14_+_69865137	-76912	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	9450	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	136280	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	136361	+	BC047682|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252151|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252152|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK293222|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK316381|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##D87434|KIAA0247|9766|KIAA0247	0.56592	CTCF.p2:21:0.566
chr22	44481550	44481652	reg1000311.p1	4.973	+	BC039811 NM_001243385	-16605	+	AK308443 NM_001243386	-59418	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	-61402	+	NM_001137605 AK309348 AK293360	87255	+	NM_022141 AK225929 AK307294 BC034406 AF237772	95211	+	AK307299 TSC_hg19_v1_chr22_+_44577227 AK311264	95623	+	BC039811|PARVB|29780|parvin, beta##NM_001243385|PARVB|29780|parvin, beta##AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##NM_001137605|PARVG|64098|parvin, gamma##AK309348|PARVG|64098|parvin, gamma##AK293360|PARVG|64098|parvin, gamma##NM_022141|PARVG|64098|parvin, gamma##AK225929|PARVG|64098|parvin, gamma##AK307294|PARVG|64098|parvin, gamma##BC034406|PARVG|64098|parvin, gamma##AF237772|PARVG|64098|parvin, gamma##AK307299|PARVG|64098|parvin, gamma	0.0	
chr10	74978703	74978843	reg1026576.p1	4.972	+	TSC_hg19_v1_chr10_+_74927876 NM_173348	-50879	+	BC000721 D88208 TSC_hg19_v1_chr10_-_74927827 AK315711 AK225519 NM_001135752 NM_001135753 NM_007265	-50937	-	TSC_hg19_v1_chr10_-_74927767 AK022616	-50989	-	TSC_hg19_v1_chr10_-_75007006 AF327347 BC136507 AK074420 NM_015190	28258	-	AB529029 TSC_hg19_v1_chr10_-_75012387 AB049948 BC021106 AK025715 AK098291 AK303204 AF151890 NM_016065	33574	-	AK308746 AL833537 BC032856 NM_145170	139786	-	NM_173348|FAM149B1|317662|family with sequence similarity 149, member B1##BC000721|ECD|11319|ecdysoneless homolog (Drosophila)##D88208|ECD|11319|ecdysoneless homolog (Drosophila)##AK315711|ECD|11319|ecdysoneless homolog (Drosophila)##AK225519|ECD|11319|ecdysoneless homolog (Drosophila)##NM_001135752|ECD|11319|ecdysoneless homolog (Drosophila)##NM_001135753|ECD|11319|ecdysoneless homolog (Drosophila)##NM_007265|ECD|11319|ecdysoneless homolog (Drosophila)##AK022616|ECD|11319|ecdysoneless homolog (Drosophila)##AF327347|DNAJC9|23234|DnaJ (Hsp40) homolog, subfamily C, member 9##BC136507|DNAJC9|23234|DnaJ (Hsp40) homolog, subfamily C, member 9##AK074420|DNAJC9|23234|DnaJ (Hsp40) homolog, subfamily C, member 9##NM_015190|DNAJC9|23234|DnaJ (Hsp40) homolog, subfamily C, member 9##AB049948|MRPS16|51021|mitochondrial ribosomal protein S16##BC021106|MRPS16|51021|mitochondrial ribosomal protein S16##AK025715|MRPS16|51021|mitochondrial ribosomal protein S16##AK098291|MRPS16|51021|mitochondrial ribosomal protein S16##AF151890|MRPS16|51021|mitochondrial ribosomal protein S16##NM_016065|MRPS16|51021|mitochondrial ribosomal protein S16##AK308746|TTC18|118491|tetratricopeptide repeat domain 18##AL833537|TTC18|118491|tetratricopeptide repeat domain 18##BC032856|TTC18|118491|tetratricopeptide repeat domain 18##NM_145170|TTC18|118491|tetratricopeptide repeat domain 18	0.693927	CTCF.p2:0:0.694
chr12	51611049	51611164	reg1025574.p1	4.972	+	AL832881 NM_002702	-19157	-	TSC_hg19_v1_chr12_-_51566921 U03494 NM_001173452 NM_001173453 NM_005653	-44200	-	TSC_hg19_v1_chr12_-_51566607 BC003634	-44475	-	AK095191 TSC_hg19_v1_chr12_-_51611589	427	-	NM_001136264 NM_001136266 NM_001136267 NM_001136268 NM_001136269 NM_014764 TSC_hg19_v1_chr12_+_51632559	21440	+	TSC_hg19_v1_chr12_+_51632609 AK303828 AK290119 AK293330 AY430097 BX647278	21493	+	AL832881|POU6F1|5463|POU class 6 homeobox 1##NM_002702|POU6F1|5463|POU class 6 homeobox 1##U03494|TFCP2|7024|transcription factor CP2##NM_001173452|TFCP2|7024|transcription factor CP2##NM_001173453|TFCP2|7024|transcription factor CP2##NM_005653|TFCP2|7024|transcription factor CP2##BC003634|TFCP2|7024|transcription factor CP2##AK095191|POU6F1|5463|POU class 6 homeobox 1##NM_001136264|DAZAP2|9802|DAZ associated protein 2##NM_001136266|DAZAP2|9802|DAZ associated protein 2##NM_001136267|DAZAP2|9802|DAZ associated protein 2##NM_001136268|DAZAP2|9802|DAZ associated protein 2##NM_001136269|DAZAP2|9802|DAZ associated protein 2##NM_014764|DAZAP2|9802|DAZ associated protein 2##AK303828|DAZAP2|9802|DAZ associated protein 2##AK290119|DAZAP2|9802|DAZ associated protein 2##AK293330|DAZAP2|9802|DAZ associated protein 2##AY430097|DAZAP2|9802|DAZ associated protein 2##BX647278|DAZAP2|9802|DAZ associated protein 2	0.159234	
chr1	41328270	41328412	reg1025654.p1	4.972	+	BC035496 TSC_hg19_v1_chr1_-_41328020	-321	-	TSC_hg19_v1_chr1_-_41328006 BC052559 NM_133467	-332	-	TSC_hg19_v1_chr1_+_41284599 AK074957	-43724	+	TSC_hg19_v1_chr1_+_41444968 NM_001905	116646	+	TSC_hg19_v1_chr1_+_41445365 BC009408	117021	+	AK297386 TSC_hg19_v1_chr1_+_41445376	117039	+	BC035496|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##BC052559|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##NM_133467|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##AK074957|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_001905|CTPS|1503|CTP synthase##BC009408|CTPS|1503|CTP synthase##AK297386|CTPS|1503|CTP synthase	0.031509	
chr14	76009163	76009343	reg1027542.p2	4.972	+	TSC_hg19_v1_chr14_+_75988840 D42106	-20401	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	-20463	+	BC051303 NM_001135049	-110417	+	NM_017791 AY260572 AY260577 BC019087 AK000378	35712	+	AK297002 NM_001195283	62551	+	AF134159 TSC_hg19_v1_chr14_-_76127220 AK311764 AL136658 AF136971 AF161406 BC002444	117943	-	D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AF134159|C14orf1|11161|chromosome 14 open reading frame 1##AK311764|C14orf1|11161|chromosome 14 open reading frame 1##AL136658|C14orf1|11161|chromosome 14 open reading frame 1##AF136971|C14orf1|11161|chromosome 14 open reading frame 1##AF161406|C14orf1|11161|chromosome 14 open reading frame 1##BC002444|C14orf1|11161|chromosome 14 open reading frame 1	0.0	
chr3	111057028	111057139	reg1027688.p1	4.972	+	TSC_hg19_v1_chr3_+_110790825 AF282874 AK075105 NM_001243288	-266189	+	TSC_hg19_v1_chr3_+_110790671 BC067808	-266382	+	TSC_hg19_v1_chr3_+_110790623 NM_001243286 NM_015480	-266536	+	NM_005816 NM_198196 TSC_hg19_v1_chr3_+_111260970 BC020749 BC027914	203883	+	AK290719 AK315237 TSC_hg19_v1_chr3_+_111261063 AL833681 CU676690	203984	+	NM_024508	257098	-	AF282874|PVRL3|25945|poliovirus receptor-related 3##AK075105|PVRL3|25945|poliovirus receptor-related 3##NM_001243288|PVRL3|25945|poliovirus receptor-related 3##BC067808|PVRL3|25945|poliovirus receptor-related 3##NM_001243286|PVRL3|25945|poliovirus receptor-related 3##NM_015480|PVRL3|25945|poliovirus receptor-related 3##NM_005816|CD96|10225|CD96 molecule##NM_198196|CD96|10225|CD96 molecule##BC020749|CD96|10225|CD96 molecule##BC027914|CD96|10225|CD96 molecule##AK290719|CD96|10225|CD96 molecule##AK315237|CD96|10225|CD96 molecule##AL833681|CD96|10225|CD96 molecule##NM_024508|ZBED2|79413|zinc finger, BED-type containing 2	0.580703	CTCF.p2:24:0.438
chr3	129862671	129862767	reg1028045.p1	4.972	+	TSC_hg19_v1_chr3_-_129830331 BC071676	-32370	-	TSC_hg19_v1_chr3_-_129830276 BC083497	-32424	-	NM_001136152 BC127755	-61981	+	EU085556 NM_153264 AM906078	201699	+	AM774225 NM_001102608	416458	+	BC127105 BC127106 TSC_hg19_v1_chr3_-_130465651 AK314219 BC110318 BC009899 BC017332 BC057239 NM_014602	602884	-	NM_001136152|ALG1L2|644974|asparagine-linked glycosylation 1-like 2##EU085556|COL6A5|256076|collagen, type VI, alpha 5##NM_153264|COL6A5|256076|collagen, type VI, alpha 5##AM906078|COL6A5|256076|collagen, type VI, alpha 5##AM774225|COL6A6|131873|collagen, type VI, alpha 6##NM_001102608|COL6A6|131873|collagen, type VI, alpha 6##BC127105|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC127106|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AK314219|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC110318|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC009899|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC017332|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC057239|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_014602|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4	0.0	
chr6	236143	236324	reg1024270.p2	4.972	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	55852	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	56264	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	155531	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.0	
chr10	115438879	115439005	reg1025602.p1	4.971	+	AM392642 AM393530 BC126407 BC143751 AL831980 AL832025 AL832330 BX640682 AY177620 AY177621 BX641052 BC005933 BC017866 BC058825 BC070130 AK056969 AY081943 NM_006175 NM_198060	-15220	-	NM_004132 D49742 S83182 BC031412 AK290832 AK303761 AK303759 AB590433 CU689160 DQ890820 DQ893975	-126114	+	AK303948 NM_001177660	-128353	+	NM_033340 U37449 BX647973	20	+	NM_001227 NM_033338 NM_033339 U67206	484	+	TSC_hg19_v1_chr10_+_115439635 AK301437 AK223489 BC015799 AK300578 U40281 U37448 U67320	723	+	AM392642|NRAP|4892|nebulin-related anchoring protein##AM393530|NRAP|4892|nebulin-related anchoring protein##BC126407|NRAP|4892|nebulin-related anchoring protein##BC143751|NRAP|4892|nebulin-related anchoring protein##AL831980|NRAP|4892|nebulin-related anchoring protein##AL832025|NRAP|4892|nebulin-related anchoring protein##AL832330|NRAP|4892|nebulin-related anchoring protein##BX640682|NRAP|4892|nebulin-related anchoring protein##AY177620|NRAP|4892|nebulin-related anchoring protein##AY177621|NRAP|4892|nebulin-related anchoring protein##BX641052|NRAP|4892|nebulin-related anchoring protein##BC005933|NRAP|4892|nebulin-related anchoring protein##BC017866|NRAP|4892|nebulin-related anchoring protein##BC058825|NRAP|4892|nebulin-related anchoring protein##BC070130|NRAP|4892|nebulin-related anchoring protein##AK056969|NRAP|4892|nebulin-related anchoring protein##AY081943|NRAP|4892|nebulin-related anchoring protein##NM_006175|NRAP|4892|nebulin-related anchoring protein##NM_198060|NRAP|4892|nebulin-related anchoring protein##NM_004132|HABP2|3026|hyaluronan binding protein 2##D49742|HABP2|3026|hyaluronan binding protein 2##S83182|HABP2|3026|hyaluronan binding protein 2##BC031412|HABP2|3026|hyaluronan binding protein 2##AK290832|HABP2|3026|hyaluronan binding protein 2##AK303761|HABP2|3026|hyaluronan binding protein 2##AK303759|HABP2|3026|hyaluronan binding protein 2##DQ890820|HABP2|3026|hyaluronan binding protein 2##DQ893975|HABP2|3026|hyaluronan binding protein 2##AK303948|HABP2|3026|hyaluronan binding protein 2##NM_001177660|HABP2|3026|hyaluronan binding protein 2##NM_033340|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U37449|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##BX647973|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##NM_001227|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##NM_033338|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##NM_033339|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U67206|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##AK301437|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##AK223489|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##BC015799|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##AK300578|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U40281|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U37448|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U67320|CASP7|840|caspase 7, apoptosis-related cysteine peptidase	0.0	
chr11	104034846	104034961	reg1027359.p1	4.971	+	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	-109	-	NM_001001711 AF429971 AK093336 AX748060 BC022018 BC022017 BC021710 BC021172	-127565	+	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	-1054704	+	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	137	-	TSC_hg19_v1_chr11_-_104035100 BC030645	197	-	AF464191 AF464192 AF464193 AF464194 AF464195 AF486844 AF486845 AF486846 AF486847 NM_001191016	734493	-	AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##NM_001001711|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AF429971|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK093336|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022018|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022017|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021710|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021172|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D##BC030645|PDGFD|80310|platelet derived growth factor D##AF464191|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464192|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464193|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464194|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464195|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486844|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486845|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486846|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486847|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_001191016|CASP12|100506742|caspase 12 (gene/pseudogene)	0.265448	
chr11	14330299	14330416	reg1029239.p1	4.971	+	TSC_hg19_v1_chr11_+_13984277 NM_006108 AK291780 AK074803 BC136513 BC136563 BC006262 AB051390	-346074	+	AY423606 BC017377 TSC_hg19_v1_chr11_+_13690267 AY600449	-640090	+	TSC_hg19_v1_chr11_+_13690255 AK315527 AK026381	-640104	+	AK309550 AK309683 NM_001177315 NM_001102669	49694	-	TSC_hg19_v1_chr11_-_14380730 BC013106 AK299606 AK313976 NM_012250	50320	-	AK300103 NM_001177314	55694	-	NM_006108|SPON1|10418|spondin 1, extracellular matrix protein##AK291780|SPON1|10418|spondin 1, extracellular matrix protein##AK074803|SPON1|10418|spondin 1, extracellular matrix protein##BC136513|SPON1|10418|spondin 1, extracellular matrix protein##BC136563|SPON1|10418|spondin 1, extracellular matrix protein##AB051390|SPON1|10418|spondin 1, extracellular matrix protein##AY423606|FAR1|84188|fatty acyl CoA reductase 1##BC017377|FAR1|84188|fatty acyl CoA reductase 1##AY600449|FAR1|84188|fatty acyl CoA reductase 1##AK315527|FAR1|84188|fatty acyl CoA reductase 1##AK026381|FAR1|84188|fatty acyl CoA reductase 1##AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##BC013106|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK299606|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK313976|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_012250|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	0.0	
chr11	31257751	31257866	reg1027194.p1	4.971	+	BX647348 NM_020869	-243576	-	TSC_hg19_v1_chr11_-_30607762 AB209163 AK314833 NM_001145399	-649963	-	TSC_hg19_v1_chr11_-_30605748 AK309809	-652060	-	AY247970 AK126066 NM_181807	133530	-	TSC_hg19_v1_chr11_+_31391404 NM_181706 AK123087 AL833128 AK289665 BC036571 BC044931 BC063804	133594	+	AK311611 BC023595 TSC_hg19_v1_chr11_-_31531154 AK310496 AK057788 NM_144981	273336	-	BX647348|DCDC5|100506627|doublecortin domain containing 5##NM_020869|DCDC5|100506627|doublecortin domain containing 5##AB209163|MPPED2|744|metallophosphoesterase domain containing 2##AK314833|MPPED2|744|metallophosphoesterase domain containing 2##NM_001145399|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2##AY247970|DCDC1|341019|doublecortin domain containing 1##NM_181807|DCDC1|341019|doublecortin domain containing 1##NM_181706|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK123087|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AL833128|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK289665|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC036571|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC044931|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC063804|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK311611|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC023595|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK310496|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK057788|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_144981|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	0.506866	CTCF.p2:-18:0.507
chr15	93425436	93425617	reg1028012.p1	4.971	+	BC110328 TSC_hg19_v1_chr15_-_93277463	-148137	-	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	-226647	-	AK057393 NM_153040	-410620	+	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	17960	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	18054	+	AK295909 TSC_hg19_v1_chr15_+_93447798	22234	+	BC110328|FAM174B|400451|family with sequence similarity 174, member B##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2##AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2	0.0	
chr17	34982472	34982577	reg1025098.p1	4.971	+	AK292307 NM_024864 BC072411	-24473	+	TSC_hg19_v1_chr17_+_34948329 NM_024308 AK315735 AY358712 BC002731	-34236	+	TSC_hg19_v1_chr17_+_34901498 AK290687 AF126964	-81012	+	BC084573 TSC_hg19_v1_chr17_-_35293961	311416	-	BC020470 NM_005568	312247	+	AK057229 NM_012138 TSC_hg19_v1_chr17_+_35306253 AF083208 BC000591 AJ249940 AB385572 CU674286 DQ892097 DQ895290	323775	+	AK292307|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024864|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##BC072411|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024308|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK315735|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AY358712|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##BC002731|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK290687|GGNBP2|79893|gametogenetin binding protein 2##AF126964|GGNBP2|79893|gametogenetin binding protein 2##BC020470|LHX1|3975|LIM homeobox 1##NM_005568|LHX1|3975|LIM homeobox 1##AK057229|AATF|26574|apoptosis antagonizing transcription factor##NM_012138|AATF|26574|apoptosis antagonizing transcription factor##AF083208|AATF|26574|apoptosis antagonizing transcription factor##BC000591|AATF|26574|apoptosis antagonizing transcription factor##AJ249940|AATF|26574|apoptosis antagonizing transcription factor##DQ892097|AATF|26574|apoptosis antagonizing transcription factor##DQ895290|AATF|26574|apoptosis antagonizing transcription factor	0.998485	CTCF.p2:-4:0.998
chr19	34611978	34612082	reg1004636.p1	4.971	+	TSC_hg19_v1_chr19_+_34287743 NM_001129994 NM_001129995 NM_024076 AK027901 AK291465 BC001185 BC009335 AK225793 AK294543	-324294	+	BC018723 NM_022467	-436597	+	TSC_hg19_v1_chr19_+_34112858 NM_001127895 NM_001127896 BC014250 BC011380 AB047801	-499095	+	TSC_hg19_v1_chr19_+_34663327 BC016842 NM_001114093 NM_015578	51301	+	TSC_hg19_v1_chr19_+_34663429 AK300208	51396	+	TSC_hg19_v1_chr19_+_34663440 AL834398 AK027643 AB069974 AB069975	51438	+	NM_001129994|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_001129995|KCTD15|79047|potassium channel tetramerisation domain containing 15##NM_024076|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK027901|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK291465|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC001185|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC009335|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK225793|KCTD15|79047|potassium channel tetramerisation domain containing 15##AK294543|KCTD15|79047|potassium channel tetramerisation domain containing 15##BC018723|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_022467|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127895|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##NM_001127896|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC014250|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC011380|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##AB047801|CHST8|64377|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8##BC016842|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_001114093|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_015578|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK300208|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AL834398|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK027643|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069974|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069975|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)	0.700298	
chr21	30476716	30476863	reg1030439.p1	4.971	+	AY171599 NM_020152	-23917	+	AK308063 TSC_hg19_v1_chr21_-_30445995 AK298801 BC072001 BC005220 NM_006585	-30800	-	TSC_hg19_v1_chr21_-_30445966 BC012584 BC095470	-30832	-	TSC_hg19_v1_chr21_+_30517918 AK309998 EF219160	41121	+	TSC_hg19_v1_chr21_+_30671158 AK291021 AB002803	194375	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	194431	+	AY171599|C21orf7|56911|chromosome 21 open reading frame 7##NM_020152|C21orf7|56911|chromosome 21 open reading frame 7##AK308063|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK298801|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC072001|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC005220|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##NM_006585|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC012584|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC095470|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK309998|C21orf7|56911|chromosome 21 open reading frame 7##EF219160|C21orf7|56911|chromosome 21 open reading frame 7##AK291021|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AB002803|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	0.0	
chr6	151250182	151250272	reg1028256.p2	4.971	+	TSC_hg19_v1_chr6_+_151187310 AK315378 NM_001242768	-62838	+	TSC_hg19_v1_chr6_+_151187064 AL117452	-63126	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	-63306	+	TSC_hg19_v1_chr6_+_151561133 BC047728 NM_005100	310887	+	U81607 TSC_hg19_v1_chr6_+_151561544 AB210003 BC046095 AK307578	311301	+	TSC_hg19_v1_chr6_+_151561578 BC006094	311354	+	AK315378|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242768|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AL117452|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC047728|AKAP12|9590|A kinase (PRKA) anchor protein 12##NM_005100|AKAP12|9590|A kinase (PRKA) anchor protein 12##U81607|AKAP12|9590|A kinase (PRKA) anchor protein 12##AB210003|AKAP12|9590|A kinase (PRKA) anchor protein 12##BC046095|AKAP12|9590|A kinase (PRKA) anchor protein 12##AK307578|AKAP12|9590|A kinase (PRKA) anchor protein 12	0.903506	CTCF.p2:-1:0.904
chr10	105358702	105358793	reg1025286.p1	4.970	+	AK299620 TSC_hg19_v1_chr10_+_105344798	-13980	+	NM_004210 U87864	-105013	+	BC043367 NM_001129742	-119751	-	AB385330 TSC_hg19_v1_chr10_-_105420936	62161	-	TSC_hg19_v1_chr10_-_105421464 AK294454	62702	-	TSC_hg19_v1_chr10_-_105437934 AK304828	79174	-	AK299620|NEURL|9148|neuralized homolog (Drosophila)##NM_004210|NEURL|9148|neuralized homolog (Drosophila)##U87864|NEURL|9148|neuralized homolog (Drosophila)##BC043367|CALHM3|119395|calcium homeostasis modulator 3##NM_001129742|CALHM3|119395|calcium homeostasis modulator 3##AK294454|SH3PXD2A|9644|SH3 and PX domains 2A##AK304828|SH3PXD2A|9644|SH3 and PX domains 2A	0.996526	CTCF.p2:-20:0.997
chr19	4267762	4267859	reg1020020.p3	4.970	+	TSC_hg19_v1_chr19_+_4247086 AK001236 BC000561 AK023988 NM_018074 AF091080	-20720	+	BC015364 L08187 NM_005755 BC046112 AB528398 DQ891589 EU176581 CU677281	-38290	+	NM_133475	-84460	+	AK056268 NM_020209	10787	+	HQ452865 HQ452866 AY358964 BC015655 NM_001169126 NM_144615	34594	-	NM_024333 TSC_hg19_v1_chr19_+_4304594 AK315661 AK295523 AK303606 AY032617 BC003124 AK021750 AF316829 DQ891833 DQ895020	36855	+	AK001236|CCDC94|55702|coiled-coil domain containing 94##BC000561|CCDC94|55702|coiled-coil domain containing 94##AK023988|CCDC94|55702|coiled-coil domain containing 94##NM_018074|CCDC94|55702|coiled-coil domain containing 94##AF091080|CCDC94|55702|coiled-coil domain containing 94##BC015364|EBI3|10148|Epstein-Barr virus induced 3##L08187|EBI3|10148|Epstein-Barr virus induced 3##NM_005755|EBI3|10148|Epstein-Barr virus induced 3##BC046112|EBI3|10148|Epstein-Barr virus induced 3##DQ891589|EBI3|10148|Epstein-Barr virus induced 3##EU176581|EBI3|10148|Epstein-Barr virus induced 3##NM_133475|ANKRD24|170961|ankyrin repeat domain 24##AK056268|SHD|56961|Src homology 2 domain containing transforming protein D##NM_020209|SHD|56961|Src homology 2 domain containing transforming protein D##HQ452865|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##HQ452866|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##AY358964|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##BC015655|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##NM_001169126|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##NM_144615|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##NM_024333|FSD1|79187|fibronectin type III and SPRY domain containing 1##AK315661|FSD1|79187|fibronectin type III and SPRY domain containing 1##AK295523|FSD1|79187|fibronectin type III and SPRY domain containing 1##AK303606|FSD1|79187|fibronectin type III and SPRY domain containing 1##AY032617|FSD1|79187|fibronectin type III and SPRY domain containing 1##BC003124|FSD1|79187|fibronectin type III and SPRY domain containing 1##AK021750|FSD1|79187|fibronectin type III and SPRY domain containing 1##AF316829|FSD1|79187|fibronectin type III and SPRY domain containing 1##DQ891833|FSD1|79187|fibronectin type III and SPRY domain containing 1##DQ895020|FSD1|79187|fibronectin type III and SPRY domain containing 1	0.998656	CTCF.p2:12:0.999
chr2	64927030	64927141	reg1024967.p1	4.970	+	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-46038	-	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-46236	-	TSC_hg19_v1_chr2_+_64751580 AL833962	-175483	+	TSC_hg19_v1_chr2_-_65090764 AK097952	163656	-	TSC_hg19_v1_chr2_-_65159574 BC037562	232492	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	288515	+	D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##AL833962|AFTPH|54812|aftiphilin##BC037562|LOC400958|400958|uncharacterized LOC400958##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.328262	CTCF.p2:23:0.328
chr6	157744536	157744650	reg1027187.p2	4.970	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-9	-	TSC_hg19_v1_chr6_+_157099876 AF253515	-644718	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-645309	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	624	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	57946	+	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	499696	+	AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9	0.063127	
chr9	129822311	129822431	reg1025138.p1	4.970	+	AF221098 NM_001190728 AB385313 CU689706	-97836	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	-145267	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	-199427	+	AK075026 TSC_hg19_v1_chr9_-_129870392	47981	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	62537	-	TSC_hg19_v1_chr9_-_129884962 AK312876	62591	-	AF221098|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190728|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AK075026|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2	0.0	
chr1	11132788	11132917	reg1032294.p1	4.969	+	TSC_hg19_v1_chr1_-_11120090 NM_003132	-12766	-	TSC_hg19_v1_chr1_-_11120076 M34338	-12774	-	TSC_hg19_v1_chr1_-_11120049 BC000309	-12800	-	TSC_hg19_v1_chr1_-_11159916 AB209236 AB527852 EU832630 EU832705 AK294058 AK296559 BC039901 BC008460 AK308778 X66113 L01457 BC028687 NM_001001998 NM_002685 BC073788	27039	-	AK024393 TSC_hg19_v1_chr1_-_11188945	56022	-	AB593027 AK313716 BC001881 NM_021146 AB593026 AY358301	116531	+	NM_003132|SRM|6723|spermidine synthase##M34338|SRM|6723|spermidine synthase##BC000309|SRM|6723|spermidine synthase##AB209236|EXOSC10|5394|exosome component 10##EU832630|EXOSC10|5394|exosome component 10##EU832705|EXOSC10|5394|exosome component 10##AK294058|EXOSC10|5394|exosome component 10##AK296559|EXOSC10|5394|exosome component 10##BC039901|EXOSC10|5394|exosome component 10##BC008460|EXOSC10|5394|exosome component 10##AK308778|EXOSC10|5394|exosome component 10##X66113|EXOSC10|5394|exosome component 10##L01457|EXOSC10|5394|exosome component 10##BC028687|EXOSC10|5394|exosome component 10##NM_001001998|EXOSC10|5394|exosome component 10##NM_002685|EXOSC10|5394|exosome component 10##BC073788|EXOSC10|5394|exosome component 10##AB593027|ANGPTL7|10218|angiopoietin-like 7##AK313716|ANGPTL7|10218|angiopoietin-like 7##BC001881|ANGPTL7|10218|angiopoietin-like 7##NM_021146|ANGPTL7|10218|angiopoietin-like 7##AB593026|ANGPTL7|10218|angiopoietin-like 7##AY358301|ANGPTL7|10218|angiopoietin-like 7	0.0	
chr12	95119705	95119843	reg1030169.p1	4.969	+	EU831778 EU831856 BC040535 NM_020698	-75510	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-266042	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-266132	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	277696	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	277742	-	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	347524	-	EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	0.0	
chr14	77411803	77411918	reg1027012.p1	4.969	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-119065	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-132598	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-132650	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	82824	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	83200	-	AK124327 TSC_hg19_v1_chr14_-_77542533	130673	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.0	
chr17	16733754	16733820	reg1037423.p1	4.969	+	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-140183	+	AK131401 NM_020787	-176626	-	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-261291	-	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	141617	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	212177	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	375826	-	EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6	0.0	
chr18	2471672	2471761	reg1027327.p1	4.969	+	NM_001117 BC093837 BC101803 S83513	-1566375	+	AK313050 NM_001099733	-1566773	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-1659413	-	AK290001 BC111020 NM_022840	99739	-	NM_006101 BC005239 TSC_hg19_v1_chr18_+_2571579 AK289396 AK313184 BC035617 BC010171	99829	+	TSC_hg19_v1_chr18_+_2571589 AF017790	99879	+	NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4##NM_006101|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC005239|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK289396|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK313184|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC035617|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC010171|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AF017790|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)	0.774407	CTCF.p2:8:0.774
chr1	117027806	117027986	reg1001383.p1	4.968	+	TSC_hg19_v1_chr1_-_116961216 AK309389	-66658	-	TSC_hg19_v1_chr1_-_116961205 BC007373 BC018892 BC028281 BC069003 AK309872 BC098428	-66706	-	AK296362 NM_001160234	-101905	+	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	85719	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	85781	-	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	182487	-	AK309389|ATP1A1OS|84852|ATP1A1 opposite strand##BC007373|ATP1A1OS|84852|ATP1A1 opposite strand##BC018892|ATP1A1OS|84852|ATP1A1 opposite strand##BC028281|ATP1A1OS|84852|ATP1A1 opposite strand##BC069003|ATP1A1OS|84852|ATP1A1 opposite strand##AK309872|ATP1A1OS|84852|ATP1A1 opposite strand##BC098428|ATP1A1OS|84852|ATP1A1 opposite strand##AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3	0.0	
chr11	82413012	82413119	reg1029416.p1	4.968	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-3261341	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-4127170	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-4127273	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	31833	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	198452	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	199709	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.514189	CTCF.p2:16:0.514
chr14	66248746	66248881	reg1030494.p1	4.968	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-369088	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-369325	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-369487	-	AB037806 AF272663 NM_001024218 NM_020806	725311	+	TSC_hg19_v1_chr14_+_66974859 AK025169	726040	+	TSC_hg19_v1_chr14_+_66974870 AK315569	726056	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.0	
chr17	58308649	58308769	reg1028530.p1	4.968	+	TSC_hg19_v1_chr17_+_58227333 BC069649 M83670 BC074768 CR541766 CU691238	-81347	+	TSC_hg19_v1_chr17_+_58227302 BC057792 NM_000717 AK289715 AK298710	-81419	+	TSC_hg19_v1_chr17_-_58213006 AK311448	-95698	-	CU691084 TSC_hg19_v1_chr17_-_58469313 BC054344	160609	-	TSC_hg19_v1_chr17_-_58469447 AF533230	160749	-	TSC_hg19_v1_chr17_-_58469580 NM_032582 AK057301	160963	-	BC069649|CA4|762|carbonic anhydrase IV##M83670|CA4|762|carbonic anhydrase IV##BC074768|CA4|762|carbonic anhydrase IV##CR541766|CA4|762|carbonic anhydrase IV##BC057792|CA4|762|carbonic anhydrase IV##NM_000717|CA4|762|carbonic anhydrase IV##AK289715|CA4|762|carbonic anhydrase IV##AK298710|CA4|762|carbonic anhydrase IV##BC054344|USP32|84669|ubiquitin specific peptidase 32##AF533230|USP32|84669|ubiquitin specific peptidase 32##NM_032582|USP32|84669|ubiquitin specific peptidase 32##AK057301|USP32|84669|ubiquitin specific peptidase 32	0.0	
chr19	47164959	47165139	reg1000719.p1	4.968	+	TSC_hg19_v1_chr19_-_47164311 BC034052 NM_145056	-679	-	AF493875 NM_033258 BC095514	-27110	-	BC017857 L29016 D29634 BC110342 BC075814 D25418 TSC_hg19_v1_chr19_-_47128333 AK315278 NM_000960	-36726	-	BC015472 TSC_hg19_v1_chr19_-_47197232	32150	-	NM_001079882	52527	-	TSC_hg19_v1_chr19_-_47220370 AK300339 AK095884 NM_001079880 NM_001079881 NM_016457	55333	-	BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)##NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)##AF493875|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##NM_033258|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##BC095514|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##L29016|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##D29634|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC110342|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC075814|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##D25418|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##AK315278|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##NM_000960|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC015472|PRKD2|25865|protein kinase D2##NM_001079882|PRKD2|25865|protein kinase D2##AK300339|PRKD2|25865|protein kinase D2##AK095884|PRKD2|25865|protein kinase D2##NM_001079880|PRKD2|25865|protein kinase D2##NM_001079881|PRKD2|25865|protein kinase D2##NM_016457|PRKD2|25865|protein kinase D2	0.0	
chr2	111952497	111952602	reg1025669.p1	4.968	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-74062	+	AK300513 NM_001142807 BC022268	-462370	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-516727	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	689077	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	689212	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	703636	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.0	
chr3	75190141	75190255	reg1030386.p1	4.968	+	AB384611 BC150608 NM_020872	-619896	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1516160	-	BC051316 BC064501 NM_018029	-2079389	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	293951	-	AK000525 NM_001124759	523285	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	531288	+	BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##BC051316|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC064501|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##NM_018029|EBLN2|55096|endogenous Bornavirus-like nucleoprotein 2##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074	0.302246	CTCF.p2:-4:0.302
chr11	93628670	93628756	reg1027205.p1	4.967	+	NM_001144871	-45046	-	AF117657 TSC_hg19_v1_chr11_+_93517488 AK023209 CU676822 AB463860	-111132	+	AF105421 TSC_hg19_v1_chr11_+_93517475	-111240	+	NM_001098672	125664	+	TSC_hg19_v1_chr11_+_93862126 BC016931 NM_015368 AF398509 AK313074	233382	+	AK074897 TSC_hg19_v1_chr11_+_93862143 AF093239	233438	+	NM_001144871|VSTM5|387804|V-set and transmembrane domain containing 5##AF117657|MED17|9440|mediator complex subunit 17##AK023209|MED17|9440|mediator complex subunit 17##AF105421|MED17|9440|mediator complex subunit 17##NM_001098672|HEPHL1|341208|hephaestin-like 1##BC016931|PANX1|24145|pannexin 1##NM_015368|PANX1|24145|pannexin 1##AF398509|PANX1|24145|pannexin 1##AK313074|PANX1|24145|pannexin 1##AK074897|PANX1|24145|pannexin 1##AF093239|PANX1|24145|pannexin 1	0.0	
chr12	7059591	7059731	reg1029985.p2	4.967	+	BC002523 BC007667 TSC_hg19_v1_chr12_+_7055771 AK300167 AB590143 BT007390 CU675749 DQ891946 DQ895133	-3841	+	TSC_hg19_v1_chr12_+_7055736 AK313379 NM_080548	-3924	+	TSC_hg19_v1_chr12_+_7053185 AK311912 BC009925 NM_138425	-6464	+	NM_002831 NM_080549 TSC_hg19_v1_chr12_+_7060446	780	+	TSC_hg19_v1_chr12_+_7060478 AK308230	825	+	TSC_hg19_v1_chr12_+_7060518 AK298470	862	+	BC002523|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##BC007667|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK300167|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##BT007390|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ891946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ895133|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK313379|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##NM_080548|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK311912|C12orf57|113246|chromosome 12 open reading frame 57##BC009925|C12orf57|113246|chromosome 12 open reading frame 57##NM_138425|C12orf57|113246|chromosome 12 open reading frame 57##NM_002831|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##NM_080549|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK308230|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK298470|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	0.0	
chr1	55267170	55267350	reg1019951.p2	4.967	+	AK000626 NM_001114108 NM_017904	-355	-	BC007956 AK289679 TSC_hg19_v1_chr1_-_55230197 BC011758 NM_152268	-37068	-	AK025524 NM_004623 TSC_hg19_v1_chr1_+_55181537 AF063602 AK292426 AK090964 AX746706 AK222562 AF073887 BC001276 BT006817 CU674642	-85723	+	AK097520 NM_001110533 NM_152607 BC039109 BC064142	4494	+	TSC_hg19_v1_chr1_-_55331351 AK298414	64091	-	AK316419 TSC_hg19_v1_chr1_-_55352418 AK302774 AK304437 AK316427	85256	-	AK000626|TTC22|55001|tetratricopeptide repeat domain 22##NM_001114108|TTC22|55001|tetratricopeptide repeat domain 22##NM_017904|TTC22|55001|tetratricopeptide repeat domain 22##BC007956|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##AK289679|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##BC011758|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##NM_152268|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##AK025524|TTC4|7268|tetratricopeptide repeat domain 4##NM_004623|TTC4|7268|tetratricopeptide repeat domain 4##AF063602|TTC4|7268|tetratricopeptide repeat domain 4##AK292426|TTC4|7268|tetratricopeptide repeat domain 4##AK090964|TTC4|7268|tetratricopeptide repeat domain 4##AK222562|TTC4|7268|tetratricopeptide repeat domain 4##AF073887|TTC4|7268|tetratricopeptide repeat domain 4##BC001276|TTC4|7268|tetratricopeptide repeat domain 4##BT006817|TTC4|7268|tetratricopeptide repeat domain 4##AK097520|C1orf177|163747|chromosome 1 open reading frame 177##NM_001110533|C1orf177|163747|chromosome 1 open reading frame 177##NM_152607|C1orf177|163747|chromosome 1 open reading frame 177##BC039109|C1orf177|163747|chromosome 1 open reading frame 177##BC064142|C1orf177|163747|chromosome 1 open reading frame 177##AK298414|DHCR24|1718|24-dehydrocholesterol reductase##AK316419|DHCR24|1718|24-dehydrocholesterol reductase##AK302774|DHCR24|1718|24-dehydrocholesterol reductase##AK304437|DHCR24|1718|24-dehydrocholesterol reductase##AK316427|DHCR24|1718|24-dehydrocholesterol reductase	0.0	
chr15	90744670	90744850	reg1029409.p3	4.967	+	TSC_hg19_v1_chr15_+_90744561 AY445887 NM_198925 AB051532 BC126438 BC144141 BC110853 AB385501 HQ258520 AK026108	-70	+	TSC_hg19_v1_chr15_+_90728151 NM_020210 AK289991 AY358392	-16564	+	TSC_hg19_v1_chr15_-_90645713 AK312627	-99033	-	TSC_hg19_v1_chr15_-_90777138 AB451276 AB451406 AB463454 CR456955 DQ891196 DQ894379	32368	-	TSC_hg19_v1_chr15_-_90777174 BC000846 U85611 U82226	32405	-	TSC_hg19_v1_chr15_-_90777199 NM_006384	32474	-	AY445887|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_198925|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB051532|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC126438|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC144141|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC110853|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##HQ258520|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK026108|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_020210|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK289991|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY358392|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AB451276|CIB1|10519|calcium and integrin binding 1 (calmyrin)##AB451406|CIB1|10519|calcium and integrin binding 1 (calmyrin)##CR456955|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ891196|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ894379|CIB1|10519|calcium and integrin binding 1 (calmyrin)##BC000846|CIB1|10519|calcium and integrin binding 1 (calmyrin)##U85611|CIB1|10519|calcium and integrin binding 1 (calmyrin)##U82226|CIB1|10519|calcium and integrin binding 1 (calmyrin)##NM_006384|CIB1|10519|calcium and integrin binding 1 (calmyrin)	0.0	
chr19	53141322	53141502	reg1030396.p1	4.967	+	BC067346 NM_001172655	-67496	+	TSC_hg19_v1_chr19_+_53073539 NM_018260 AK001753 BC131719 BC136425 BC136426 BC054884 BC080612	-67870	+	CR749856 TSC_hg19_v1_chr19_+_53030941 NM_001039886	-110483	+	TSC_hg19_v1_chr19_-_53141603 BC032867 AK027518 NM_001105549 NM_001105550 NM_001105551 NM_001105552 NM_001105553 NM_001105554 NM_018300	212	-	TSC_hg19_v1_chr19_-_53193740 AK289399 AK075066 NM_001242531 NM_001242538	52398	-	AK097434 NM_030972	91722	-	BC067346|ZNF701|55762|zinc finger protein 701##NM_001172655|ZNF701|55762|zinc finger protein 701##NM_018260|ZNF701|55762|zinc finger protein 701##AK001753|ZNF701|55762|zinc finger protein 701##BC131719|ZNF701|55762|zinc finger protein 701##BC136425|ZNF701|55762|zinc finger protein 701##BC136426|ZNF701|55762|zinc finger protein 701##BC054884|ZNF701|55762|zinc finger protein 701##BC080612|ZNF701|55762|zinc finger protein 701##CR749856|ZNF808|388558|zinc finger protein 808##NM_001039886|ZNF808|388558|zinc finger protein 808##BC032867|ZNF83|55769|zinc finger protein 83##AK027518|ZNF83|55769|zinc finger protein 83##NM_001105549|ZNF83|55769|zinc finger protein 83##NM_001105550|ZNF83|55769|zinc finger protein 83##NM_001105551|ZNF83|55769|zinc finger protein 83##NM_001105552|ZNF83|55769|zinc finger protein 83##NM_001105553|ZNF83|55769|zinc finger protein 83##NM_001105554|ZNF83|55769|zinc finger protein 83##NM_018300|ZNF83|55769|zinc finger protein 83##AK289399|ZNF83|55769|zinc finger protein 83##AK075066|ZNF83|55769|zinc finger protein 83##NM_001242531|ZNF83|55769|zinc finger protein 83##NM_001242538|ZNF83|55769|zinc finger protein 83##AK097434|ZNF611|81856|zinc finger protein 611##NM_030972|ZNF611|81856|zinc finger protein 611	0.0	
chr22	26294785	26294947	reg1028597.p1	4.967	+	TSC_hg19_v1_chr22_+_26138168 AY077700	-156682	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	-156746	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-333920	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	270571	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	270631	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	270797	+	AY077700|MYO18B|84700|myosin XVIIIB##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.2094	CTCF.p2:25:0.209
chr4	129141568	129141695	reg1025913.p2	4.967	+	AL832170 NM_018078 NM_032239 NM_178043 TSC_hg19_v1_chr4_+_128982502	-159129	+	TSC_hg19_v1_chr4_+_128982483 BC002840 BC018794 BC110300	-159145	+	TSC_hg19_v1_chr4_+_128982466 AK310421 AK092764 AX747714	-159189	+	TSC_hg19_v1_chr4_-_129208960 DQ893193 DQ893194 DQ893694 DQ896520 DQ896521 DQ896522 DQ896866 AJ002030 AX775755	67313	-	AK091741 AX747155 TSC_hg19_v1_chr4_-_129208964 BC016692	67333	-	TSC_hg19_v1_chr4_-_129208969 BC092478	67360	-	AL832170|LARP1B|55132|La ribonucleoprotein domain family, member 1B##NM_018078|LARP1B|55132|La ribonucleoprotein domain family, member 1B##NM_032239|LARP1B|55132|La ribonucleoprotein domain family, member 1B##NM_178043|LARP1B|55132|La ribonucleoprotein domain family, member 1B##BC002840|LARP1B|55132|La ribonucleoprotein domain family, member 1B##BC018794|LARP1B|55132|La ribonucleoprotein domain family, member 1B##BC110300|LARP1B|55132|La ribonucleoprotein domain family, member 1B##AK310421|LARP1B|55132|La ribonucleoprotein domain family, member 1B##AK092764|LARP1B|55132|La ribonucleoprotein domain family, member 1B##DQ893193|PGRMC2|10424|progesterone receptor membrane component 2##DQ893194|PGRMC2|10424|progesterone receptor membrane component 2##DQ893694|PGRMC2|10424|progesterone receptor membrane component 2##DQ896520|PGRMC2|10424|progesterone receptor membrane component 2##DQ896521|PGRMC2|10424|progesterone receptor membrane component 2##DQ896522|PGRMC2|10424|progesterone receptor membrane component 2##DQ896866|PGRMC2|10424|progesterone receptor membrane component 2##AJ002030|PGRMC2|10424|progesterone receptor membrane component 2##AK091741|PGRMC2|10424|progesterone receptor membrane component 2##BC016692|PGRMC2|10424|progesterone receptor membrane component 2##BC092478|PGRMC2|10424|progesterone receptor membrane component 2	0.461939	CTCF.p2:2:0.424
chr5	101897983	101898100	reg1029711.p1	4.967	+	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	-63408	-	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	-265933	-	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-1659113	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	303489	+	M37721 TSC_hg19_v1_chr5_+_102201730 AK296521 AK290158 S75037 S75038 AB527419 AB095007 BT007419	303765	+	BC151135 BC157835 BC015325 CR627424 AK295796 AK225572 AK000132 NM_017676 TSC_hg19_v1_chr5_-_102455843	557772	-	DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase##M37721|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK296521|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK290158|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75037|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75038|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AB095007|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BT007419|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BC151135|GIN1|54826|gypsy retrotransposon integrase 1##BC157835|GIN1|54826|gypsy retrotransposon integrase 1##BC015325|GIN1|54826|gypsy retrotransposon integrase 1##CR627424|GIN1|54826|gypsy retrotransposon integrase 1##AK295796|GIN1|54826|gypsy retrotransposon integrase 1##AK225572|GIN1|54826|gypsy retrotransposon integrase 1##AK000132|GIN1|54826|gypsy retrotransposon integrase 1##NM_017676|GIN1|54826|gypsy retrotransposon integrase 1	1.073823	CTCF.p2:7:0.942
chr2	19969412	19969551	reg1029030.p2	4.966	+	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	-411102	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	-1198671	-	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	-1227565	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	99154	+	TSC_hg19_v1_chr2_-_20101456 BC050088	131947	-	CU691276 BC070381 TSC_hg19_v1_chr2_-_20101717 BC057850 NM_001008237	132200	-	BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946##BC070381|TTC32|130502|tetratricopeptide repeat domain 32##BC057850|TTC32|130502|tetratricopeptide repeat domain 32##NM_001008237|TTC32|130502|tetratricopeptide repeat domain 32	0.786578	CTCF.p2:-11:0.787
chr22	42327881	42328022	reg1026367.p2	4.966	+	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	-5152	-	NM_001207020	-17281	-	TSC_hg19_v1_chr22_+_42229269 CU013184 CU013472 AB463291	-98680	+	EU035297 NM_001110215	8271	-	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	15172	-	TSC_hg19_v1_chr22_+_42372810 NM_019106 NM_145733 AK290037 AK299919 AL833942 BC111779 CR456572 AF285107 AF285108 AF285109	44957	+	AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_001207020|SHISA8|440829|shisa homolog 8 (Xenopus laevis)##CU013184|SREBF2|6721|sterol regulatory element binding transcription factor 2##CU013472|SREBF2|6721|sterol regulatory element binding transcription factor 2##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M##NM_019106|SEPT3|55964|septin 3##NM_145733|SEPT3|55964|septin 3##AK290037|SEPT3|55964|septin 3##AK299919|SEPT3|55964|septin 3##AL833942|SEPT3|55964|septin 3##BC111779|SEPT3|55964|septin 3##CR456572|SEPT3|55964|septin 3##AF285107|SEPT3|55964|septin 3##AF285108|SEPT3|55964|septin 3##AF285109|SEPT3|55964|septin 3	0.0	
chr2	47546944	47547124	reg1030246.p1	4.966	+	TSC_hg19_v1_chr2_-_47403685 NM_001743	-143325	-	TSC_hg19_v1_chr2_-_47403656 BC008437	-143380	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	-143384	-	NM_002354 TSC_hg19_v1_chr2_+_47596376	49308	+	TSC_hg19_v1_chr2_+_47596449 AK026585 BC014785 M26481 M32325 X14758 M33011 M32306 DQ891338 DQ894520 CR542259 CR542283	49511	+	TSC_hg19_v1_chr2_+_47630218 AK304496	83170	+	NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC008437|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##NM_002354|EPCAM|4072|epithelial cell adhesion molecule##AK026585|EPCAM|4072|epithelial cell adhesion molecule##BC014785|EPCAM|4072|epithelial cell adhesion molecule##M26481|EPCAM|4072|epithelial cell adhesion molecule##M32325|EPCAM|4072|epithelial cell adhesion molecule##X14758|EPCAM|4072|epithelial cell adhesion molecule##M33011|EPCAM|4072|epithelial cell adhesion molecule##M32306|EPCAM|4072|epithelial cell adhesion molecule##DQ891338|EPCAM|4072|epithelial cell adhesion molecule##DQ894520|EPCAM|4072|epithelial cell adhesion molecule##CR542259|EPCAM|4072|epithelial cell adhesion molecule##CR542283|EPCAM|4072|epithelial cell adhesion molecule##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.0	
chr6_cox_hap2	1876776	1876889	reg1029312.p1	4.966	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.778878	CTCF.p2:15:0.779
chr7	22765374	22765500	reg1000917.p1	4.966	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	-225590	-	AL833195 NM_012294	-368916	-	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-779955	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	1386	+	TSC_hg19_v1_chr7_+_22767104 X04403	1681	+	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	97006	-	BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	0.429924	CTCF.p2:1:0.430
chr19	7192354	7192484	reg1023417.p1	4.965	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-92868	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-122704	+	AK315405 NM_001044387 NM_001044388 NM_024341	-122957	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	101541	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	267588	+	TSC_hg19_v1_chr19_+_7460061 AB011093	267658	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr2	208148245	208148358	reg1027666.p2	4.965	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-116676	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-117645	-	BC112076 BC112078 NM_173077 AJ422118	-344001	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	246342	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	246420	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	246480	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.01664	
chr1	17402026	17402141	reg1025123.p1	4.964	+	DQ403007 TSC_hg19_v1_chr1_-_17380528 AK312056 U17248 BC007840 NM_003000	-21508	-	AL354615 AY461712 TSC_hg19_v1_chr1_-_17338424 BC030267 AK290210 NM_001141973 NM_001141974 NM_022089	-63700	-	AK301655 NM_001135247 NM_017459	-94007	-	AB587350 AB023211 AB030176 BC009701 TSC_hg19_v1_chr1_-_17445947 AK295783 NM_007365	43824	-	AK314644 AK026652 AK225541 NM_013358 AB033768 BC130574 BC136402 HQ258487	129582	+	AB026831 NM_016233 BC109091 BC041592 BC109092	173516	+	DQ403007|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AK312056|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##U17248|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##BC007840|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##NM_003000|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AL354615|ATP13A2|23400|ATPase type 13A2##AY461712|ATP13A2|23400|ATPase type 13A2##BC030267|ATP13A2|23400|ATPase type 13A2##AK290210|ATP13A2|23400|ATPase type 13A2##NM_001141973|ATP13A2|23400|ATPase type 13A2##NM_001141974|ATP13A2|23400|ATPase type 13A2##NM_022089|ATP13A2|23400|ATPase type 13A2##AK301655|MFAP2|4237|microfibrillar-associated protein 2##NM_001135247|MFAP2|4237|microfibrillar-associated protein 2##NM_017459|MFAP2|4237|microfibrillar-associated protein 2##AB023211|PADI2|11240|peptidyl arginine deiminase, type II##AB030176|PADI2|11240|peptidyl arginine deiminase, type II##BC009701|PADI2|11240|peptidyl arginine deiminase, type II##AK295783|PADI2|11240|peptidyl arginine deiminase, type II##NM_007365|PADI2|11240|peptidyl arginine deiminase, type II##AK314644|PADI1|29943|peptidyl arginine deiminase, type I##AK026652|PADI1|29943|peptidyl arginine deiminase, type I##AK225541|PADI1|29943|peptidyl arginine deiminase, type I##NM_013358|PADI1|29943|peptidyl arginine deiminase, type I##AB033768|PADI1|29943|peptidyl arginine deiminase, type I##BC130574|PADI1|29943|peptidyl arginine deiminase, type I##BC136402|PADI1|29943|peptidyl arginine deiminase, type I##HQ258487|PADI1|29943|peptidyl arginine deiminase, type I##AB026831|PADI3|51702|peptidyl arginine deiminase, type III##NM_016233|PADI3|51702|peptidyl arginine deiminase, type III##BC109091|PADI3|51702|peptidyl arginine deiminase, type III##BC041592|PADI3|51702|peptidyl arginine deiminase, type III##BC109092|PADI3|51702|peptidyl arginine deiminase, type III	0.992315	CTCF.p2:19:0.992
chr12	69590594	69590704	reg1026403.p1	4.964	+	J04970 NM_001874 AK127859	-233630	-	TSC_hg19_v1_chr12_-_69326952 AF368463 AK313180 BC022276 NM_001005502 NM_198320	-263687	-	EU076746 EU076747 EU076748 EU076749 TSC_hg19_v1_chr12_+_69202803	-387848	+	NM_007007 TSC_hg19_v1_chr12_+_69633348 AK223568 AK299928	42684	+	TSC_hg19_v1_chr12_+_69633357 BC005000 BC000714 X67337 AK292024 CU674352 CU678850 DQ892159 EU176688	42740	+	TSC_hg19_v1_chr12_+_69742133 AK130149 NM_000239	151482	+	J04970|CPM|1368|carboxypeptidase M##NM_001874|CPM|1368|carboxypeptidase M##AK127859|CPM|1368|carboxypeptidase M##AF368463|CPM|1368|carboxypeptidase M##AK313180|CPM|1368|carboxypeptidase M##BC022276|CPM|1368|carboxypeptidase M##NM_001005502|CPM|1368|carboxypeptidase M##NM_198320|CPM|1368|carboxypeptidase M##EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK130149|LYZ|4069|lysozyme##NM_000239|LYZ|4069|lysozyme	0.974396	CTCF.p2:0:0.974
chr12	82021500	82021597	reg1026333.p2	4.964	+	AK294505 AK297372 AK299853 NM_001220477 NM_001220478	-29494	-	AK123372 AK296380 NM_001220479 NM_001220480	-258389	-	TSC_hg19_v1_chr12_+_81471857 BC009317 BC015769 NM_024560 AK025616 AX764482	-549690	+	BC104912 BC143485 NM_001220475 NM_001220476 AK126971 TSC_hg19_v1_chr12_-_82152435 AB210009 NM_001220473 NM_001220474	130823	-	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	131561	-	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	730628	-	AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK123372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK296380|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220479|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220480|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC009317|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##BC015769|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##NM_024560|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AK025616|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AX764482|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##BC104912|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC143485|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220475|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220476|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK126971|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AB210009|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220473|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220474|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59	0.997851	CTCF.p2:7:0.998
chr16	19083711	19083812	reg1027217.p1	4.964	+	TSC_hg19_v1_chr16_+_19079232 AL136647 NM_001190983 BC043272	-4496	+	AF098948 TSC_hg19_v1_chr16_+_19078967 AK225115 AB528110 AM393051 AM393521	-4789	+	AK315470 NM_016138 TSC_hg19_v1_chr16_+_19078935 BC003185 AK024291	-4831	+	TSC_hg19_v1_chr16_+_19125253 AK096327 NM_001034841	41487	+	TSC_hg19_v1_chr16_+_19179561 NM_016524 BC004518 AF220560 AB527504 CU678742	95990	+	BC070101 NM_001105248 NM_001105249	338295	+	AL136647|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_001190983|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC043272|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AF098948|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK225115|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AM393051|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AM393521|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK315470|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_016138|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC003185|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK024291|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK096327|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##NM_001034841|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##NM_016524|SYT17|51760|synaptotagmin XVII##BC004518|SYT17|51760|synaptotagmin XVII##AF220560|SYT17|51760|synaptotagmin XVII##BC070101|TMC5|79838|transmembrane channel-like 5##NM_001105248|TMC5|79838|transmembrane channel-like 5##NM_001105249|TMC5|79838|transmembrane channel-like 5	0.100523	
chr18	19577725	19577828	reg1026320.p1	4.964	+	CR749635 TSC_hg19_v1_chr18_+_19353654	-224129	+	AY149908 BC110581 BC110582 NM_020774	-256232	+	TSC_hg19_v1_chr18_+_19321288 AY147849	-256493	+	AK123079 TSC_hg19_v1_chr18_-_19749029	171210	-	X95701 BC027891 NM_005257 TSC_hg19_v1_chr18_+_19749549	171700	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	420049	-	CR749635|MIB1|57534|mindbomb homolog 1 (Drosophila)##AY149908|MIB1|57534|mindbomb homolog 1 (Drosophila)##BC110581|MIB1|57534|mindbomb homolog 1 (Drosophila)##BC110582|MIB1|57534|mindbomb homolog 1 (Drosophila)##NM_020774|MIB1|57534|mindbomb homolog 1 (Drosophila)##AY147849|MIB1|57534|mindbomb homolog 1 (Drosophila)##AK123079|LOC100128893|100128893|uncharacterized LOC100128893##X95701|GATA6|2627|GATA binding protein 6##BC027891|GATA6|2627|GATA binding protein 6##NM_005257|GATA6|2627|GATA binding protein 6##HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	0.087191	
chr1	85134013	85134138	reg1028095.p1	4.964	+	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-93969	-	TSC_hg19_v1_chr1_-_84972262 NM_005274	-161806	-	TSC_hg19_v1_chr1_-_84971888 AK312111	-162151	-	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	22001	-	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	224811	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	328633	-	M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##NM_005274|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AK312111|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2	0.0	
chr20	17629960	17630050	reg1025553.p2	4.964	+	NM_001011546 NM_006870 TSC_hg19_v1_chr20_+_17550756 AK315994 BC009477 AK312645 BX647319 S65738 AK302338	-79266	+	AK316247 BC041483 NM_001161705	-90463	-	AF039655 Y16717 TSC_hg19_v1_chr20_-_17512006 NM_001195	-118013	-	TSC_hg19_v1_chr20_-_17641123 AB287347 AB384598	11131	-	BC128578 BC128577 TSC_hg19_v1_chr20_-_17662793 AF006751	32760	-	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	32878	-	NM_001011546|DSTN|11034|destrin (actin depolymerizing factor)##NM_006870|DSTN|11034|destrin (actin depolymerizing factor)##AK315994|DSTN|11034|destrin (actin depolymerizing factor)##BC009477|DSTN|11034|destrin (actin depolymerizing factor)##AK312645|DSTN|11034|destrin (actin depolymerizing factor)##BX647319|DSTN|11034|destrin (actin depolymerizing factor)##S65738|DSTN|11034|destrin (actin depolymerizing factor)##AK302338|DSTN|11034|destrin (actin depolymerizing factor)##AK316247|BFSP1|631|beaded filament structural protein 1, filensin##BC041483|BFSP1|631|beaded filament structural protein 1, filensin##NM_001161705|BFSP1|631|beaded filament structural protein 1, filensin##AF039655|BFSP1|631|beaded filament structural protein 1, filensin##Y16717|BFSP1|631|beaded filament structural protein 1, filensin##NM_001195|BFSP1|631|beaded filament structural protein 1, filensin##AB287347|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128578|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128577|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AF006751|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)	0.999152	CTCF.p2:-10:0.999
chr2	86031843	86031998	reg1032790.p1	4.964	+	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-50915	+	NM_006433 NM_012483 X54101 AK310057 AK311537 AK311012 AK311657 BC063245 AK304728 TSC_hg19_v1_chr2_+_85921514 DQ892267 DQ895468 BC023576 CR541859 X05044	-110440	+	NM_000542 NM_198843	-136057	-	AY152815 NM_001042437	62872	-	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	84166	-	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	301063	-	NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##NM_006433|GNLY|10578|granulysin##NM_012483|GNLY|10578|granulysin##X54101|GNLY|10578|granulysin##AK310057|GNLY|10578|granulysin##AK311537|GNLY|10578|granulysin##AK311012|GNLY|10578|granulysin##AK311657|GNLY|10578|granulysin##BC063245|GNLY|10578|granulysin##AK304728|GNLY|10578|granulysin##DQ892267|GNLY|10578|granulysin##DQ895468|GNLY|10578|granulysin##BC023576|GNLY|10578|granulysin##CR541859|GNLY|10578|granulysin##X05044|GNLY|10578|granulysin##NM_000542|SFTPB|6439|surfactant protein B##NM_198843|SFTPB|6439|surfactant protein B##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa	0.387211	CTCF.p2:2:0.387
chr6	88193892	88194007	reg1031549.p1	4.964	+	TSC_hg19_v1_chr6_+_88182707 AJ810302 AJ810303 AB528735 AJ851888 AJ851889 AJ851890	-11237	+	TSC_hg19_v1_chr6_+_88182694 AK293696 AK299432 BC008372 BC017807 D87969	-11263	+	TSC_hg19_v1_chr6_+_88182658 NM_001168398 NM_006416	-11298	+	TSC_hg19_v1_chr6_-_88299686 AF143874 CU679707 BC105784 AK315669	105729	-	AK023550 TSC_hg19_v1_chr6_-_88299696 BC022341 BC010420	105758	-	TSC_hg19_v1_chr6_-_88299726 NM_020320	105790	-	AJ810302|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##AJ810303|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##AJ851888|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##AJ851889|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##AJ851890|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##AK293696|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##AK299432|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##BC008372|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##BC017807|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##D87969|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##NM_001168398|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##NM_006416|SLC35A1|10559|solute carrier family 35 (CMP-sialic acid transporter), member A1##AF143874|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial##BC105784|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial##AK315669|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial##AK023550|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial##BC022341|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial##BC010420|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial##NM_020320|RARS2|57038|arginyl-tRNA synthetase 2, mitochondrial	0.971002	CTCF.p2:2:0.971
chr7	140623998	140624168	reg1030269.p2	4.964	+	TSC_hg19_v1_chr7_+_140396507 AF067166 NM_004546 AF050639 BC063026 BC001168 CR542121	-227580	+	TSC_hg19_v1_chr7_+_140372910 AF131745 AY302592 NM_052853 BC014107	-251145	+	AB033103 TSC_hg19_v1_chr7_-_140340614	-283473	-	TSC_hg19_v1_chr7_-_140624512 AB529216 AK314346 BC101757 BC112079 M95712 NM_004333	424	-	AF151897 AK024776 NM_016071	90384	-	TSC_hg19_v1_chr7_-_140714748 AF078858 BC105793	90667	-	AF067166|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##NM_004546|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF050639|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC063026|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC001168|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##CR542121|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF131745|ADCK2|90956|aarF domain containing kinase 2##AY302592|ADCK2|90956|aarF domain containing kinase 2##NM_052853|ADCK2|90956|aarF domain containing kinase 2##BC014107|ADCK2|90956|aarF domain containing kinase 2##AB033103|DENND2A|27147|DENN/MADD domain containing 2A##AK314346|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC101757|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC112079|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##M95712|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##NM_004333|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##AF151897|MRPS33|51650|mitochondrial ribosomal protein S33##AK024776|MRPS33|51650|mitochondrial ribosomal protein S33##NM_016071|MRPS33|51650|mitochondrial ribosomal protein S33##AF078858|MRPS33|51650|mitochondrial ribosomal protein S33##BC105793|MRPS33|51650|mitochondrial ribosomal protein S33	0.040454	
chr8	115242412	115242527	reg1031130.p1	4.964	+	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	-793340	-	AB114605 NM_198124	-853088	-	BC028739 AK313469 AF167082 NM_014379 AK297393	-4255503	-	TSC_hg19_v1_chr8_-_116680208 AK304046	1437751	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	1438696	-	TSC_hg19_v1_chr8_-_116681365 AF183810	1438866	-	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I	0.955422	CTCF.p2:-3:0.955
chr8	123792476	123792585	reg1024555.p2	4.964	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-1138904	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1968024	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1968260	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	1381	+	BC042145 TSC_hg19_v1_chr8_+_123794000	1464	+	TSC_hg19_v1_chr8_+_123794108 AB020661	1573	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.0	
chr8	89215732	89215860	reg1029441.p1	4.964	+	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	-329537	-	AK093121 AX747937 BC117326 BC117328 NM_173538	-1337123	+	BC150601 AF272900 NM_019098 DQ426865	-1459884	-	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	123950	-	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	1554234	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	1554488	+	BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3##AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3##NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3##AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2	0.0	
chr10	135118354	135118474	reg1028329.p1	4.963	+	BC115404 D26579 BC064500 AX810718 AK310662 TSC_hg19_v1_chr10_-_135090368 AK301147 AK312834 NM_001109 NM_001164489 NM_001164490	-28049	-	AF068006 BC108915 BC108916 NM_014468 AB464343 EU446701	-67003	+	AB011076 AY606112 NM_003577	-74638	+	BC005011 BC093770 BC111957 BC143247 AF042379 TSC_hg19_v1_chr10_-_135122377 BC052368 AK299564 AK297251 AK314520	3945	-	TSC_hg19_v1_chr10_+_135122444 BC015139 BC019897 NM_145806 AK091711 AX747142 AK292380	3995	+	AK223586 NM_006659	4182	-	BC115404|ADAM8|101|ADAM metallopeptidase domain 8##D26579|ADAM8|101|ADAM metallopeptidase domain 8##BC064500|ADAM8|101|ADAM metallopeptidase domain 8##AK310662|ADAM8|101|ADAM metallopeptidase domain 8##AK301147|ADAM8|101|ADAM metallopeptidase domain 8##AK312834|ADAM8|101|ADAM metallopeptidase domain 8##NM_001109|ADAM8|101|ADAM metallopeptidase domain 8##NM_001164489|ADAM8|101|ADAM metallopeptidase domain 8##NM_001164490|ADAM8|101|ADAM metallopeptidase domain 8##AF068006|VENTX|27287|VENT homeobox##BC108915|VENTX|27287|VENT homeobox##BC108916|VENTX|27287|VENT homeobox##NM_014468|VENTX|27287|VENT homeobox##EU446701|VENTX|27287|VENT homeobox##AB011076|UTF1|8433|undifferentiated embryonic cell transcription factor 1##AY606112|UTF1|8433|undifferentiated embryonic cell transcription factor 1##NM_003577|UTF1|8433|undifferentiated embryonic cell transcription factor 1##BC005011|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC093770|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC111957|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC143247|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AF042379|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC052368|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AK299564|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AK297251|TUBGCP2|10844|tubulin, gamma complex associated protein 2##AK314520|TUBGCP2|10844|tubulin, gamma complex associated protein 2##BC015139|ZNF511|118472|zinc finger protein 511##BC019897|ZNF511|118472|zinc finger protein 511##NM_145806|ZNF511|118472|zinc finger protein 511##AK091711|ZNF511|118472|zinc finger protein 511##AK292380|ZNF511|118472|zinc finger protein 511##AK223586|TUBGCP2|10844|tubulin, gamma complex associated protein 2##NM_006659|TUBGCP2|10844|tubulin, gamma complex associated protein 2	0.830069	CTCF.p2:-16:0.830
chr11	108093706	108093810	reg1026651.p1	4.963	+	NM_000051	-200	+	D83243 BC050561 TSC_hg19_v1_chr11_-_108093366 BC040356 BC094769 AK290020 NM_002519	-386	-	U58852 AB527441 TSC_hg19_v1_chr11_-_108093291 BC136270 AK291687 X97186	-475	-	TSC_hg19_v1_chr11_+_108093793 AB209133 U33841	39	+	BC059411 BC029536 AK303096 NM_152587	244484	-	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	275437	-	NM_000051|ATM|472|ataxia telangiectasia mutated##D83243|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC050561|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC040356|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC094769|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AK290020|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##NM_002519|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##U58852|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC136270|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AK291687|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##X97186|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AB209133|ATM|472|ataxia telangiectasia mutated##U33841|ATM|472|ataxia telangiectasia mutated##BC029536|C11orf65|160140|chromosome 11 open reading frame 65##AK303096|C11orf65|160140|chromosome 11 open reading frame 65##NM_152587|C11orf65|160140|chromosome 11 open reading frame 65##AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2	0.254487	CTCF.p2:-9:0.254
chr4	58309068	58309158	reg1020306.p1	4.963	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-332545	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-332581	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-332714	-	TSC_hg19_v1_chr4_+_62066948 AK309793	3757862	+	NM_015236	4053725	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	6965983	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.0	
chr8	41278751	41278856	reg1025594.p1	4.963	+	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	-111773	-	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	-523466	-	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	-1267785	+	TSC_hg19_v1_chr8_+_41348077 NM_001174124 NM_016099	69270	+	TSC_hg19_v1_chr8_+_41348100 AK026613	69296	+	TSC_hg19_v1_chr8_+_41348114 AB104615 BC001227 AF125102	69309	+	BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1##BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##NM_001174124|GOLGA7|51125|golgin A7##NM_016099|GOLGA7|51125|golgin A7##AK026613|GOLGA7|51125|golgin A7##AB104615|GOLGA7|51125|golgin A7##BC001227|GOLGA7|51125|golgin A7##AF125102|GOLGA7|51125|golgin A7	0.627949	CTCF.p2:-6:0.628
chr9	132784946	132785025	reg1025533.p1	4.963	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-187220	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-187263	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-187301	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	20369	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	20503	-	BC039728 NM_001136557 NM_001136558 NM_020960	30999	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr1	220390894	220391018	reg1026077.p2	4.962	+	TSC_hg19_v1_chr1_+_220267495 AY952883 D28500 AK291432 BC040376	-123350	+	TSC_hg19_v1_chr1_+_220267461 AY267462 NM_018060 BC137438	-123504	+	AJ249339 TSC_hg19_v1_chr1_-_220263167 AK315962 NM_006085	-127782	-	AB020646 BC146760 TSC_hg19_v1_chr1_-_220445745 BC050630 AF004828 BC131573	54756	-	TSC_hg19_v1_chr1_-_220445773 AF255648 AK021928 BC098383	54809	-	TSC_hg19_v1_chr1_-_220445786 AK291234	54834	-	AY952883|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##D28500|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##AK291432|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##BC040376|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##AJ249339|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AK315962|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##NM_006085|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AB020646|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC146760|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC050630|AURKAPS1|6791|aurora kinase A pseudogene 1##AF004828|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC131573|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AF255648|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AK021928|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC098383|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AK291234|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)	0.327636	CTCF.p2:-27:0.328
chr22	35795894	35795961	reg1026272.p1	4.962	+	AF051791 TSC_hg19_v1_chr22_+_35779219	-16765	+	TSC_hg19_v1_chr22_+_35777088 AK313120 BC001491 M23041 AB528477 BT019785 CR541945 CR541968 CU013103 CU013391 DQ892310 DQ895510 JF323038	-18801	+	CR456505 NM_002133 TSC_hg19_v1_chr22_+_35777085 X06985	-18859	+	TSC_hg19_v1_chr22_+_35796134 NM_006739 AK223323 AK301121 D83986 AK130620 AK291136 AK298624 AK122853 AK312533	198	+	TSC_hg19_v1_chr22_+_35796157 BC000142 AK308343 CR456517 X74795 BC003656	244	+	TSC_hg19_v1_chr22_+_35796295 AB463121 CU013117 CU013405 CU674060 CU678562	435	+	AF051791|HMOX1|3162|heme oxygenase (decycling) 1##AK313120|HMOX1|3162|heme oxygenase (decycling) 1##BC001491|HMOX1|3162|heme oxygenase (decycling) 1##M23041|HMOX1|3162|heme oxygenase (decycling) 1##BT019785|HMOX1|3162|heme oxygenase (decycling) 1##CR541945|HMOX1|3162|heme oxygenase (decycling) 1##CR541968|HMOX1|3162|heme oxygenase (decycling) 1##CU013103|HMOX1|3162|heme oxygenase (decycling) 1##CU013391|HMOX1|3162|heme oxygenase (decycling) 1##DQ892310|HMOX1|3162|heme oxygenase (decycling) 1##DQ895510|HMOX1|3162|heme oxygenase (decycling) 1##JF323038|HMOX1|3162|heme oxygenase (decycling) 1##CR456505|HMOX1|3162|heme oxygenase (decycling) 1##NM_002133|HMOX1|3162|heme oxygenase (decycling) 1##X06985|HMOX1|3162|heme oxygenase (decycling) 1##NM_006739|MCM5|4174|minichromosome maintenance complex component 5##AK223323|MCM5|4174|minichromosome maintenance complex component 5##AK301121|MCM5|4174|minichromosome maintenance complex component 5##D83986|MCM5|4174|minichromosome maintenance complex component 5##AK130620|MCM5|4174|minichromosome maintenance complex component 5##AK291136|MCM5|4174|minichromosome maintenance complex component 5##AK298624|MCM5|4174|minichromosome maintenance complex component 5##AK122853|MCM5|4174|minichromosome maintenance complex component 5##AK312533|MCM5|4174|minichromosome maintenance complex component 5##BC000142|MCM5|4174|minichromosome maintenance complex component 5##AK308343|MCM5|4174|minichromosome maintenance complex component 5##CR456517|MCM5|4174|minichromosome maintenance complex component 5##X74795|MCM5|4174|minichromosome maintenance complex component 5##BC003656|MCM5|4174|minichromosome maintenance complex component 5##CU013117|MCM5|4174|minichromosome maintenance complex component 5##CU013405|MCM5|4174|minichromosome maintenance complex component 5	0.0	
chr22	42336119	42336300	reg1028302.p2	4.962	+	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	-13410	-	NM_001207020	-25539	-	TSC_hg19_v1_chr22_+_42229269 CU013184 CU013472 AB463291	-106938	+	EU035297 NM_001110215	13	-	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	6914	-	TSC_hg19_v1_chr22_+_42372810 NM_019106 NM_145733 AK290037 AK299919 AL833942 BC111779 CR456572 AF285107 AF285108 AF285109	36699	+	AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_001207020|SHISA8|440829|shisa homolog 8 (Xenopus laevis)##CU013184|SREBF2|6721|sterol regulatory element binding transcription factor 2##CU013472|SREBF2|6721|sterol regulatory element binding transcription factor 2##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M##NM_019106|SEPT3|55964|septin 3##NM_145733|SEPT3|55964|septin 3##AK290037|SEPT3|55964|septin 3##AK299919|SEPT3|55964|septin 3##AL833942|SEPT3|55964|septin 3##BC111779|SEPT3|55964|septin 3##CR456572|SEPT3|55964|septin 3##AF285107|SEPT3|55964|septin 3##AF285108|SEPT3|55964|septin 3##AF285109|SEPT3|55964|septin 3	0.0	
chr3	40350945	40351096	reg1029502.p1	4.962	+	TSC_hg19_v1_chr3_+_39851138 BC092512 AK126013 AF396687 NM_015460 BC109311 BC109312	-499845	+	NM_182935 BC075796 AK127034 AK290187 BC022471	-841901	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	-901878	+	BC031275 AK057627 AK309874 AK309698 TSC_hg19_v1_chr3_-_40351022 BC045736 BC118565 BC106900	48	-	NM_005875 TSC_hg19_v1_chr3_+_40351187 AK223448 BC006996 AF077052	160	+	TSC_hg19_v1_chr3_+_40351197 AF263452	186	+	BC092512|MYRIP|25924|myosin VIIA and Rab interacting protein##AK126013|MYRIP|25924|myosin VIIA and Rab interacting protein##AF396687|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_015460|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109311|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109312|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA##BC031275|FLJ33065|440952|uncharacterized LOC440952##AK057627|FLJ33065|440952|uncharacterized LOC440952##AK309874|FLJ33065|440952|uncharacterized LOC440952##BC045736|FLJ33065|440952|uncharacterized LOC440952##BC118565|FLJ33065|440952|uncharacterized LOC440952##BC106900|FLJ33065|440952|uncharacterized LOC440952##NM_005875|EIF1B|10289|eukaryotic translation initiation factor 1B##AK223448|EIF1B|10289|eukaryotic translation initiation factor 1B##BC006996|EIF1B|10289|eukaryotic translation initiation factor 1B##AF077052|EIF1B|10289|eukaryotic translation initiation factor 1B##AF263452|EIF1B|10289|eukaryotic translation initiation factor 1B	0.0	
chr7	72388867	72389019	reg1027922.p2	4.962	+	TSC_hg19_v1_chr7_+_72349925 AB014518 NM_172020	-39008	+	TSC_hg19_v1_chr7_+_72300065 BC010183	-88844	+	AK303225 AK309556 AK301471 BC068520 AK310913 NM_001145440 NM_001145441	-90161	-	TSC_hg19_v1_chr7_+_72395623 AK123814 AB289621	6682	+	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	7931	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	36299	-	AB014518|POM121|9883|POM121 membrane glycoprotein##NM_172020|POM121|9883|POM121 membrane glycoprotein##BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1##AK303225|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK309556|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK301471|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##BC068520|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK310913|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145440|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145441|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK123814|POM121|9883|POM121 membrane glycoprotein##AB289621|POM121|9883|POM121 membrane glycoprotein##AK292548|POM121|9883|POM121 membrane glycoprotein##BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1	0.0	
chr7	76221374	76221517	reg1032974.p1	4.962	+	TSC_hg19_v1_chr7_+_76178675 BC078169	-42770	+	TSC_hg19_v1_chr7_+_76178647 BC090058	-42813	+	NM_030570 NM_182684 AK290096 AY233462 BC004304 AK056760 CU678662	-81589	+	TSC_hg19_v1_chr7_-_76256148 BC017101	34758	-	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	35102	-	BC036053 NM_020879 BX649000 AK292491 HM370402	530501	+	BC078169|LOC100133091|100133091|uncharacterized LOC100133091##BC090058|LOC100133091|100133091|uncharacterized LOC100133091##NM_030570|UPK3B|80761|uroplakin 3B##NM_182684|UPK3B|80761|uroplakin 3B##AK290096|UPK3B|80761|uroplakin 3B##AY233462|UPK3B|80761|uroplakin 3B##BC004304|UPK3B|80761|uroplakin 3B##AK056760|UPK3B|80761|uroplakin 3B##BC017101|POMZP3|22932|POM121 and ZP3 fusion##BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146	0.099671	
chr10	112155806	112155986	reg1015244.p2	4.961	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-91196	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-91303	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-170075	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	101855	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	171596	+	AF067163 TSC_hg19_v1_chr10_+_112344155	188219	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.0	
chr1	198757978	198758116	reg1029675.p1	4.961	+	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-149717	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-149822	+	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	-149874	+	TSC_hg19_v1_chr1_-_198906559 EF413001	148500	-	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	1238822	+	AK316513 TSC_hg19_v1_chr1_+_200011716	1253677	+	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	0.864198	CTCF.p2:6:0.864
chr13	99686192	99686313	reg1030026.p1	4.961	+	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	-55962	-	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	-281347	-	TSC_hg19_v1_chr13_-_99229363 BC035578 BC065378 NM_001032296	-456941	-	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	52439	-	AK290342 NM_001144072	166426	+	TSC_hg19_v1_chr13_-_99852951 BC043515 AK097488	166715	-	AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC035578|STK24|8428|serine/threonine kinase 24##BC065378|STK24|8428|serine/threonine kinase 24##NM_001032296|STK24|8428|serine/threonine kinase 24##BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9##AK290342|UBAC2|337867|UBA domain containing 2##NM_001144072|UBAC2|337867|UBA domain containing 2##BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)	0.628556	CTCF.p2:17:0.629
chr20	5591551	5591653	reg1024257.p3	4.961	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	-15	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-296566	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-483907	+	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	139464	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	300524	+	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	339521	-	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	0.019274	
chr3	76094255	76094370	reg1024589.p1	4.961	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-259610	-	NM_001128223	-260058	-	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	-372826	+	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	994968	+	TSC_hg19_v1_chr3_-_78666943 AK025535	2572673	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	2974275	-	AK123776|ZNF717|100131827|zinc finger protein 717##NM_001128223|ZNF717|100131827|zinc finger protein 717##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)	0.562931	CTCF.p2:16:0.563
chr6	36947208	36947327	reg1027601.p1	4.961	+	BC035634 NM_153370	-25059	+	NM_001199159	-31229	+	NM_152734 AJ420498 TSC_hg19_v1_chr6_+_36853727 BC095423 AK172780 AK315984 BC105947 BC107489 BC105946 BX538108 AK300351 AY358637 BX647220 BC023605	-93557	+	TSC_hg19_v1_chr6_-_36953911 BC006507 CU674346 CU691916 AF151822 AK303318 BC000702 BC040659 AF189289 AY947344	6515	-	TSC_hg19_v1_chr6_-_36953924 BC009962 AK225628	6659	-	TSC_hg19_v1_chr6_-_36953944 BC125056	6676	-	BC035634|PI16|221476|peptidase inhibitor 16##NM_153370|PI16|221476|peptidase inhibitor 16##NM_001199159|PI16|221476|peptidase inhibitor 16##NM_152734|C6orf89|221477|chromosome 6 open reading frame 89##AJ420498|C6orf89|221477|chromosome 6 open reading frame 89##BC095423|C6orf89|221477|chromosome 6 open reading frame 89##AK172780|C6orf89|221477|chromosome 6 open reading frame 89##AK315984|C6orf89|221477|chromosome 6 open reading frame 89##BC105947|C6orf89|221477|chromosome 6 open reading frame 89##BC107489|C6orf89|221477|chromosome 6 open reading frame 89##BC105946|C6orf89|221477|chromosome 6 open reading frame 89##BX538108|C6orf89|221477|chromosome 6 open reading frame 89##AK300351|C6orf89|221477|chromosome 6 open reading frame 89##AY358637|C6orf89|221477|chromosome 6 open reading frame 89##BX647220|C6orf89|221477|chromosome 6 open reading frame 89##BC023605|C6orf89|221477|chromosome 6 open reading frame 89##BC006507|MTCH1|23787|mitochondrial carrier 1##AF151822|MTCH1|23787|mitochondrial carrier 1##AK303318|MTCH1|23787|mitochondrial carrier 1##BC000702|MTCH1|23787|mitochondrial carrier 1##BC040659|MTCH1|23787|mitochondrial carrier 1##AF189289|MTCH1|23787|mitochondrial carrier 1##AY947344|MTCH1|23787|mitochondrial carrier 1##BC009962|MTCH1|23787|mitochondrial carrier 1##AK225628|MTCH1|23787|mitochondrial carrier 1##BC125056|MTCH1|23787|mitochondrial carrier 1	0.0	
chr7	138144402	138144583	reg1024520.p2	4.961	+	AK298421 NM_001190906 NM_001190907 NM_005989 Z28339 AK298428 BC130625 BC130627 AK289425 HQ258384	-383274	+	TSC_hg19_v1_chr7_-_137686833 NM_001253775 NM_194071	-457640	-	AK131517 TSC_hg19_v1_chr7_-_137686812	-457680	-	TSC_hg19_v1_chr7_+_138145003 AK312610 AK075306 NM_003852 NM_015905 AK302679	500	+	AF119042 BC028689 TSC_hg19_v1_chr7_+_138145183 AB528587 AF009353	744	+	BC036796 NM_174959	204476	-	AK298421|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190906|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190907|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_005989|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##Z28339|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK298428|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130625|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130627|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK289425|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##HQ258384|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001253775|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_194071|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK131517|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK312610|TRIM24|8805|tripartite motif containing 24##AK075306|TRIM24|8805|tripartite motif containing 24##NM_003852|TRIM24|8805|tripartite motif containing 24##NM_015905|TRIM24|8805|tripartite motif containing 24##AK302679|TRIM24|8805|tripartite motif containing 24##AF119042|TRIM24|8805|tripartite motif containing 24##BC028689|TRIM24|8805|tripartite motif containing 24##AF009353|TRIM24|8805|tripartite motif containing 24##BC036796|SVOPL|136306|SVOP-like##NM_174959|SVOPL|136306|SVOP-like	0.0	
chr9	37582679	37582814	reg1028345.p1	4.961	+	AF174598 AF176705 NM_012166 TSC_hg19_v1_chr9_-_37576280	-6481	-	TSC_hg19_v1_chr9_+_37485944 BC014331 AK023452 AK302345 AK303167 NM_022490 AK301347 AK024032 AK225050 BC017766 BC001337 CR457313 AK091294 AX746899	-96716	+	TSC_hg19_v1_chr9_-_37465448 AK292404	-117305	-	CR627326 AB435233 TSC_hg19_v1_chr9_-_37592574 BC034247	9773	-	TSC_hg19_v1_chr9_-_37592575 BC029423 NM_001001790 NM_001134484 NM_001134485	9859	-	TSC_hg19_v1_chr9_+_37650996 AB023184 NM_014907 BC114965	68288	+	AF174598|FBXO10|26267|F-box protein 10##AF176705|FBXO10|26267|F-box protein 10##NM_012166|FBXO10|26267|F-box protein 10##BC014331|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK023452|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK302345|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK303167|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##NM_022490|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK301347|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK024032|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK225050|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC017766|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC001337|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##CR457313|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK091294|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5##AB435233|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC034247|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC029423|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001001790|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134484|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134485|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##AB023184|FRMPD1|22844|FERM and PDZ domain containing 1##NM_014907|FRMPD1|22844|FERM and PDZ domain containing 1##BC114965|FRMPD1|22844|FERM and PDZ domain containing 1	0.96653	CTCF.p2:1:0.967
chrX	120134542	120134665	reg1022257.p1	4.961	+	BC029540 NM_001080141 NM_001080146	-14966	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080141 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	-19826	-	BC029540 NM_001080137 NM_001080138 NM_001080139 NM_001080141 NM_001080142 NM_001080143 NM_001080144 NM_001080145 NM_001080146 NM_001242922 NM_173571	-24686	-	TSC_hg19_v1_chrX_+_120181464 BC050732 NM_012084 AK313356	46837	+	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	2183637	+	TSC_hg19_v1_chrX_-_122866885 AK001758	2732280	-	BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080137|CT47A10|728036|cancer/testis antigen family 47, member A10##NM_001080138|CT47A9|728042|cancer/testis antigen family 47, member A9##NM_001080139|CT47A8|728049|cancer/testis antigen family 47, member A8##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080142|CT47A5|728072|cancer/testis antigen family 47, member A5##NM_001080143|CT47A4|728075|cancer/testis antigen family 47, member A4##NM_001080144|CT47A3|728082|cancer/testis antigen family 47, member A3##NM_001080145|CT47A2|728090|cancer/testis antigen family 47, member A2##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##NM_001242922|CT47A12|100507170|cancer/testis antigen family 47, member A12##NM_173571|CT47A11|255313|cancer/testis antigen family 47, member A11##BC050732|GLUD2|2747|glutamate dehydrogenase 2##NM_012084|GLUD2|2747|glutamate dehydrogenase 2##AK313356|GLUD2|2747|glutamate dehydrogenase 2##NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##AK001758|THOC2|57187|THO complex 2	0.011718	
chr13	48807642	48807766	reg1025918.p2	4.960	+	AB527639 DQ890591 DQ893759 CU674270 BT006863 TSC_hg19_v1_chr13_+_48807572	-171	+	TSC_hg19_v1_chr13_+_48807341 AF152462 AF246221 BC016148 AK000503 AK027411 AK130048 BC000554 AF086918	-360	+	TSC_hg19_v1_chr13_+_48807293 NM_021999 BC018053 AF092128 AF136973	-426	+	BC039553 TSC_hg19_v1_chr13_-_48877810	70105	-	TSC_hg19_v1_chr13_+_48877882 AK291258 AK300284 NM_000321	70126	+	AK299179 AK307730 TSC_hg19_v1_chr13_+_48877886	70182	+	DQ890591|ITM2B|9445|integral membrane protein 2B##DQ893759|ITM2B|9445|integral membrane protein 2B##BT006863|ITM2B|9445|integral membrane protein 2B##AF152462|ITM2B|9445|integral membrane protein 2B##AF246221|ITM2B|9445|integral membrane protein 2B##BC016148|ITM2B|9445|integral membrane protein 2B##AK000503|ITM2B|9445|integral membrane protein 2B##AK027411|ITM2B|9445|integral membrane protein 2B##AK130048|ITM2B|9445|integral membrane protein 2B##BC000554|ITM2B|9445|integral membrane protein 2B##AF086918|ITM2B|9445|integral membrane protein 2B##NM_021999|ITM2B|9445|integral membrane protein 2B##BC018053|ITM2B|9445|integral membrane protein 2B##AF092128|ITM2B|9445|integral membrane protein 2B##AF136973|ITM2B|9445|integral membrane protein 2B##AK291258|RB1|5925|retinoblastoma 1##AK300284|RB1|5925|retinoblastoma 1##NM_000321|RB1|5925|retinoblastoma 1##AK299179|RB1|5925|retinoblastoma 1##AK307730|RB1|5925|retinoblastoma 1	0.028475	
chr22	18429183	18429364	reg1029449.p2	4.960	+	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-171939	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-172050	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	-172066	-	TSC_hg19_v1_chr22_-_18484268 AK127487	54955	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	77988	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	131415	+	BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26	0.0	
chr4	2464560	2464673	reg1026596.p2	4.960	+	TSC_hg19_v1_chr4_+_2420681 AK126028 NM_001193282	-43919	+	TSC_hg19_v1_chr4_-_2420373 BC137309 BC137310 BC053664 AB046863 BC032605 NM_001172656 NM_001172657 NM_001172658 NM_020972 AK294710	-44212	-	BC035793 AK294874 TSC_hg19_v1_chr4_-_2366542 AK316484 NM_001172659 NM_001172660	-98050	-	TSC_hg19_v1_chr4_+_2470826 NM_001185010 NM_002938	6186	+	TSC_hg19_v1_chr4_+_2470835 AK307372	6219	+	TSC_hg19_v1_chr4_+_2470845 AB000468	6228	+	NM_001193282|LOC402160|402160|uncharacterized LOC402160##BC137309|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC137310|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC053664|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AB046863|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC032605|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172656|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172657|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172658|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_020972|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AK294710|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC035793|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AK294874|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AK316484|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172659|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172660|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001185010|RNF4|6047|ring finger protein 4##NM_002938|RNF4|6047|ring finger protein 4##AK307372|RNF4|6047|ring finger protein 4##AB000468|RNF4|6047|ring finger protein 4	0.310678	CTCF.p2:23:0.311
chr6	48733123	48733239	reg1029101.p2	4.960	+	TSC_hg19_v1_chr6_-_48078931 AK300335	-654256	-	BC136779 AK123835 AK299301 NM_001013732 NM_207499	-696777	-	BC126194 BC126198 NM_181744 AY377391 AY288419 HQ258199	-983393	+	M65131 BC016282 TSC_hg19_v1_chr6_-_49430938 BX647789 AK312611 AK292568 NM_000255	697764	-	AK293016 NM_018132 BC016279 TSC_hg19_v1_chr6_+_49431119	697923	+	AK126371 NM_001010904	734489	+	AK300335|C6orf138|442213|chromosome 6 open reading frame 138##BC136779|C6orf138|442213|chromosome 6 open reading frame 138##AK123835|C6orf138|442213|chromosome 6 open reading frame 138##AK299301|C6orf138|442213|chromosome 6 open reading frame 138##NM_001013732|C6orf138|442213|chromosome 6 open reading frame 138##NM_207499|C6orf138|442213|chromosome 6 open reading frame 138##BC126194|OPN5|221391|opsin 5##BC126198|OPN5|221391|opsin 5##NM_181744|OPN5|221391|opsin 5##AY377391|OPN5|221391|opsin 5##AY288419|OPN5|221391|opsin 5##HQ258199|OPN5|221391|opsin 5##M65131|MUT|4594|methylmalonyl CoA mutase##BC016282|MUT|4594|methylmalonyl CoA mutase##BX647789|MUT|4594|methylmalonyl CoA mutase##AK312611|MUT|4594|methylmalonyl CoA mutase##AK292568|MUT|4594|methylmalonyl CoA mutase##NM_000255|MUT|4594|methylmalonyl CoA mutase##AK293016|CENPQ|55166|centromere protein Q##NM_018132|CENPQ|55166|centromere protein Q##BC016279|CENPQ|55166|centromere protein Q##NM_001010904|GLYATL3|389396|glycine-N-acyltransferase-like 3	0.045007	
chr7	69204951	69205131	reg1026753.p2	4.960	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-140453	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-140712	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-141205	+	TSC_hg19_v1_chr7_+_70231164 AK296981	1026164	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1392747	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2596737	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.0	
chr10	27150189	27150294	reg1029586.p2	4.959	+	TSC_hg19_v1_chr10_-_27149997 NM_001012750 NM_001012751 NM_001012752 NM_001178116 NM_001178119 NM_001178120 NM_001178121 NM_001178122 NM_001178123 NM_001178124 NM_001178125 NM_005470	-236	-	TSC_hg19_v1_chr10_-_27149916 AF260262 AK298646 AK126803 AB040151	-302	-	AB529081 FJ380057 FJ380058 FJ380059 TSC_hg19_v1_chr10_-_27149883 AF540955 AK296751 AF001628 AF006516 BC013238 U87166 AB209268 BC024254 AK291823	-401	-	BC130453 TSC_hg19_v1_chr10_-_27389422 AB028997 AK001137 NM_014915	239143	-	AB384745 CU692788 BC019602 TSC_hg19_v1_chr10_-_27443272 AY358484 AK314372 AK291292	292966	-	TSC_hg19_v1_chr10_-_27443304 BC007795 BC023507 BC024032	293050	-	NM_001012750|ABI1|10006|abl-interactor 1##NM_001012751|ABI1|10006|abl-interactor 1##NM_001012752|ABI1|10006|abl-interactor 1##NM_001178116|ABI1|10006|abl-interactor 1##NM_001178119|ABI1|10006|abl-interactor 1##NM_001178120|ABI1|10006|abl-interactor 1##NM_001178121|ABI1|10006|abl-interactor 1##NM_001178122|ABI1|10006|abl-interactor 1##NM_001178123|ABI1|10006|abl-interactor 1##NM_001178124|ABI1|10006|abl-interactor 1##NM_001178125|ABI1|10006|abl-interactor 1##NM_005470|ABI1|10006|abl-interactor 1##AF260262|ABI1|10006|abl-interactor 1##AK298646|ABI1|10006|abl-interactor 1##AK126803|ABI1|10006|abl-interactor 1##AB040151|ABI1|10006|abl-interactor 1##FJ380057|ABI1|10006|abl-interactor 1##FJ380058|ABI1|10006|abl-interactor 1##FJ380059|ABI1|10006|abl-interactor 1##AF540955|ABI1|10006|abl-interactor 1##AK296751|ABI1|10006|abl-interactor 1##AF001628|ABI1|10006|abl-interactor 1##AF006516|ABI1|10006|abl-interactor 1##BC013238|ABI1|10006|abl-interactor 1##U87166|ABI1|10006|abl-interactor 1##AB209268|ABI1|10006|abl-interactor 1##BC024254|ABI1|10006|abl-interactor 1##AK291823|ABI1|10006|abl-interactor 1##BC130453|ANKRD26|22852|ankyrin repeat domain 26##AB028997|ANKRD26|22852|ankyrin repeat domain 26##AK001137|ANKRD26|22852|ankyrin repeat domain 26##NM_014915|ANKRD26|22852|ankyrin repeat domain 26##BC019602|YME1L1|10730|YME1-like 1 (S. cerevisiae)##AY358484|YME1L1|10730|YME1-like 1 (S. cerevisiae)##AK314372|YME1L1|10730|YME1-like 1 (S. cerevisiae)##AK291292|YME1L1|10730|YME1-like 1 (S. cerevisiae)##BC007795|YME1L1|10730|YME1-like 1 (S. cerevisiae)##BC023507|YME1L1|10730|YME1-like 1 (S. cerevisiae)##BC024032|YME1L1|10730|YME1-like 1 (S. cerevisiae)	0.84541	CTCF.p2:-18:0.845
chr1	166134203	166134357	reg1029671.p1	4.959	+	AF236637 AK294537 TSC_hg19_v1_chr1_+_165797063 AB062451	-337194	+	TSC_hg19_v1_chr1_+_165796794 NM_012474 BC002906	-337509	+	AK124964 BC009228 TSC_hg19_v1_chr1_+_165738255 BC071770	-396059	+	TSC_hg19_v1_chr1_-_166135951 NM_001017961	1674	-	TSC_hg19_v1_chr1_-_166135982 AB593134	1705	-	TSC_hg19_v1_chr1_-_166136076 BC114214	1860	-	AF236637|UCK2|7371|uridine-cytidine kinase 2##AK294537|UCK2|7371|uridine-cytidine kinase 2##AB062451|UCK2|7371|uridine-cytidine kinase 2##NM_012474|UCK2|7371|uridine-cytidine kinase 2##BC002906|UCK2|7371|uridine-cytidine kinase 2##AK124964|LOC100147773|100147773|uncharacterized LOC100147773##BC009228|LOC100147773|100147773|uncharacterized LOC100147773##BC071770|LOC100147773|100147773|uncharacterized LOC100147773##NM_001017961|FAM78B|149297|family with sequence similarity 78, member B##BC114214|FAM78B|149297|family with sequence similarity 78, member B	0.173809	
chr12	110337962	110338068	reg1028818.p1	4.959	+	AY372530 AY372531 CU679533 AK313457 AF209704 TSC_hg19_v1_chr12_-_110318304 AY372532 BC009932 NM_016433	-19737	-	BC117426 BC143307 BC143315 TSC_hg19_v1_chr12_-_110271207 AJ296305 NM_021625	-66807	-	TSC_hg19_v1_chr12_-_110271182 AL834192	-66828	-	TSC_hg19_v1_chr12_+_110338090 AK092736 AX747696 NM_001143852 BC004285 AK301262	87	+	AY007230 NM_032300 BC022838	356	+	AB451294 AB451428 AF124491 AK303198 BT007312 CR533568 AB385285 TSC_hg19_v1_chr12_-_110434050	96024	-	AY372530|GLTP|51228|glycolipid transfer protein##AY372531|GLTP|51228|glycolipid transfer protein##AK313457|GLTP|51228|glycolipid transfer protein##AF209704|GLTP|51228|glycolipid transfer protein##AY372532|GLTP|51228|glycolipid transfer protein##BC009932|GLTP|51228|glycolipid transfer protein##NM_016433|GLTP|51228|glycolipid transfer protein##BC117426|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143307|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143315|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AJ296305|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_021625|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AL834192|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AK092736|TCHP|84260|trichoplein, keratin filament binding##NM_001143852|TCHP|84260|trichoplein, keratin filament binding##BC004285|TCHP|84260|trichoplein, keratin filament binding##AK301262|TCHP|84260|trichoplein, keratin filament binding##AY007230|TCHP|84260|trichoplein, keratin filament binding##NM_032300|TCHP|84260|trichoplein, keratin filament binding##BC022838|TCHP|84260|trichoplein, keratin filament binding##AB451294|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AB451428|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AF124491|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##AK303198|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##BT007312|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2##CR533568|GIT2|9815|G protein-coupled receptor kinase interacting ArfGAP 2	0.550491	CTCF.p2:0:0.550
chr17	30842727	30842907	reg1023868.p1	4.959	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-28057	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-28220	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-28746	+	CU688936 AB385376 AB018270 BC146763 NM_015194	361078	-	TSC_hg19_v1_chr17_-_31204141 AK127942	361306	-	TSC_hg19_v1_chr17_-_31204196 BC030602	361396	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.0	
chr18	5967836	5967937	reg1028513.p2	4.959	+	NM_001080209	-75784	-	TSC_hg19_v1_chr18_-_5630663 BC008377	-337239	-	AF069072 AB023204 NM_012307 TSC_hg19_v1_chr18_-_5543997 AK128531	-423898	-	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	447029	-	NM_001243517	543528	+	NM_001010000 BX648684 AK308259 AK302026	866579	+	NM_001080209|TMEM200C|645369|transmembrane protein 200C##BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AF069072|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AB023204|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_012307|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AK128531|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28	0.078067	
chr4	154497458	154497571	reg1033436.p1	4.959	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-110022	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-231639	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-231727	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	107884	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	107916	+	TSC_hg19_v1_chr4_+_154605441 BC033756	107950	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.116016	
chrX	88605150	88605259	reg1030362.p1	4.959	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	-602964	+	NM_019117 NM_057162 AK056457 AB051474 BC161675 AL832514 AF284765 AF284766 BC140839 BC140840 BC142652 BC146677 AB385497	-1832399	+	AK055953 AK298787 NM_001139515	-3087234	+	BC117398 BC117400 NM_138960 BC101144 BC101145 AF497480 BC029920 AB464725 HQ258115	571807	+	NM_080832	2084392	+	NM_032967 AJ276804 AJ564847 AK299638 AK299813 AK316263 TSC_hg19_v1_chrX_+_91034373	2429113	+	NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1##NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)##NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)##AK056457|KLHL4|56062|kelch-like 4 (Drosophila)##AB051474|KLHL4|56062|kelch-like 4 (Drosophila)##BC161675|KLHL4|56062|kelch-like 4 (Drosophila)##AL832514|KLHL4|56062|kelch-like 4 (Drosophila)##AF284765|KLHL4|56062|kelch-like 4 (Drosophila)##AF284766|KLHL4|56062|kelch-like 4 (Drosophila)##BC140839|KLHL4|56062|kelch-like 4 (Drosophila)##BC140840|KLHL4|56062|kelch-like 4 (Drosophila)##BC142652|KLHL4|56062|kelch-like 4 (Drosophila)##BC146677|KLHL4|56062|kelch-like 4 (Drosophila)##AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)##BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_080832|PABPC5|140886|poly(A) binding protein, cytoplasmic 5##NM_032967|PCDH11X|27328|protocadherin 11 X-linked##AJ276804|PCDH11X|27328|protocadherin 11 X-linked##AJ564847|PCDH11X|27328|protocadherin 11 X-linked##AK299813|PCDH11X|27328|protocadherin 11 X-linked##AK316263|PCDH11X|27328|protocadherin 11 X-linked	0.776416	CTCF.p2:4:0.776
chr11	69152129	69152306	reg1026642.p2	4.958	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	-90595	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-294691	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-335791	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	303639	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	303693	+	BC000076 BC001501 BC014078 TSC_hg19_v1_chr11_+_69455939 M73554 BC023620	303733	+	AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1##BC000076|CCND1|595|cyclin D1##BC001501|CCND1|595|cyclin D1##BC014078|CCND1|595|cyclin D1##M73554|CCND1|595|cyclin D1##BC023620|CCND1|595|cyclin D1	0.0	
chr13	91697822	91697919	reg1026509.p1	4.958	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3373001	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5324431	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7241370	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	353034	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	2181557	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3433956	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.981684	CTCF.p2:12:0.982
chr15	81274659	81274806	reg1029343.p2	4.958	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	-203011	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	-286723	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	-287070	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	7468	-	TSC_hg19_v1_chr15_+_81293344 NM_022566	18612	+	AK302120 BC062471 NM_173528 AK307565	151895	+	AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##NM_022566|MESDC1|59274|mesoderm development candidate 1##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26	0.148838	
chr16	537863	537960	reg1026299.p1	4.958	+	TSC_hg19_v1_chr16_+_524843 AK303061 NM_001142272	-13062	+	TSC_hg19_v1_chr16_+_475648 BC051360 NM_014700	-62259	+	TSC_hg19_v1_chr16_+_475616 AB014565 AF395731	-62296	+	TSC_hg19_v1_chr16_+_570732 Z36827 AF038180	32846	+	TSC_hg19_v1_chr16_+_577845 BC112918 NM_005632 U85647 BC032648	39981	+	TSC_hg19_v1_chr16_+_610415 BC016613 NM_145270	72503	+	AK303061|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##NM_001142272|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##BC051360|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##NM_014700|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##AB014565|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##AF395731|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##BC112918|SOLH|6650|small optic lobes homolog (Drosophila)##NM_005632|SOLH|6650|small optic lobes homolog (Drosophila)##U85647|SOLH|6650|small optic lobes homolog (Drosophila)##BC032648|SOLH|6650|small optic lobes homolog (Drosophila)##BC016613|C16orf11|146325|chromosome 16 open reading frame 11##NM_145270|C16orf11|146325|chromosome 16 open reading frame 11	0.941476	CTCF.p2:-19:0.941
chr3	2755755	2755884	reg1029059.p1	4.958	+	AK095729 TSC_hg19_v1_chr3_+_2553286	-202539	+	NM_001206955	-475307	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	-615258	+	NM_001206956 NM_175613 AK057278 AK314396 BC026119	178090	+	AK304256 NM_000564 NM_001243099 NM_175724 NM_175725 NM_175726 NM_175727 NM_175728	396238	-	NM_182916 TSC_hg19_v1_chr3_+_3168634 AK290411 BC005184 AL834397 BC012537 AB063105 AF151805 AK124137	412832	+	AK095729|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4##AK304256|IL5RA|3568|interleukin 5 receptor, alpha##NM_000564|IL5RA|3568|interleukin 5 receptor, alpha##NM_001243099|IL5RA|3568|interleukin 5 receptor, alpha##NM_175724|IL5RA|3568|interleukin 5 receptor, alpha##NM_175725|IL5RA|3568|interleukin 5 receptor, alpha##NM_175726|IL5RA|3568|interleukin 5 receptor, alpha##NM_175727|IL5RA|3568|interleukin 5 receptor, alpha##NM_175728|IL5RA|3568|interleukin 5 receptor, alpha##NM_182916|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AK290411|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC005184|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AL834397|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC012537|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AB063105|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AF151805|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1	0.88531	CTCF.p2:1:0.885
chr5	78023644	78023795	reg1028739.p1	4.958	+	TSC_hg19_v1_chr5_-_77944584 NM_005779	-79153	-	CR936660 TSC_hg19_v1_chr5_-_77845052	-178696	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-217523	-	J05225 TSC_hg19_v1_chr5_-_78281101	257369	-	AK290865 TSC_hg19_v1_chr5_-_78281134	257414	-	TSC_hg19_v1_chr5_-_78281142 AK314903	257427	-	NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B##AK314903|ARSB|411|arylsulfatase B	0.0	
chr6_ssto_hap7	3028084	3028175	reg1026551.p1	4.958	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.016416	
chrX	79903658	79903813	reg1030040.p2	4.958	+	BX537938 NM_152630 BC030784 AK313875 BC028710 BC034979	-227773	+	AK128147 NM_001170574	-312733	+	BC014194 NM_016954 AY035371 AB527983 CU680824	-625981	+	BC111490 AY497046 AY497048 AY497049 AY497050 AY497051 AY497052 AY497053 AY497054 AY497055 NM_153252	161472	-	NM_003022 AK024892 AK309350 BC103762 TSC_hg19_v1_chrX_+_80457495	553668	+	AK094058 AX748432 NM_030763	553705	-	BX537938|FAM46D|169966|family with sequence similarity 46, member D##NM_152630|FAM46D|169966|family with sequence similarity 46, member D##BC030784|FAM46D|169966|family with sequence similarity 46, member D##AK313875|FAM46D|169966|family with sequence similarity 46, member D##BC028710|FAM46D|169966|family with sequence similarity 46, member D##BC034979|FAM46D|169966|family with sequence similarity 46, member D##AK128147|FAM46D|169966|family with sequence similarity 46, member D##NM_001170574|FAM46D|169966|family with sequence similarity 46, member D##BC014194|TBX22|50945|T-box 22##NM_016954|TBX22|50945|T-box 22##AY035371|TBX22|50945|T-box 22##BC111490|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497046|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497048|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497049|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497050|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497051|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497052|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497053|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497054|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497055|BRWD3|254065|bromodomain and WD repeat domain containing 3##NM_153252|BRWD3|254065|bromodomain and WD repeat domain containing 3##NM_003022|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK024892|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309350|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##BC103762|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5	0.976467	CTCF.p2:-26:0.976
chr10	104404712	104404852	reg1031097.p1	4.957	+	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	-498	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	-140963	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	-141063	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	69315	-	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	69563	+	TSC_hg19_v1_chr10_+_104503704 AK300871	98888	+	NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2##AK300871|C10orf26|54838|chromosome 10 open reading frame 26	0.463399	CTCF.p2:-6:0.438
chr8	38524016	38524161	reg1025338.p1	4.957	+	BC137511 BC137512 BC139744 AK125570 NM_207412	-137912	-	FJ809916 FJ809917 NM_001174063 NM_001174064 NM_015850 NM_023105 NM_023106 NM_023110	-197737	-	BC018128 TSC_hg19_v1_chr8_-_38326154 M60485 X66945 AB208919 BC015035 AK222718 AK223126	-197937	-	BX647696 NM_001146216	61615	+	AY072874 AY072875 TSC_hg19_v1_chr8_+_38614814 AK308849	90698	+	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	120634	+	BC137511|C8orf86|389649|chromosome 8 open reading frame 86##BC137512|C8orf86|389649|chromosome 8 open reading frame 86##BC139744|C8orf86|389649|chromosome 8 open reading frame 86##AK125570|C8orf86|389649|chromosome 8 open reading frame 86##NM_207412|C8orf86|389649|chromosome 8 open reading frame 86##FJ809916|FGFR1|2260|fibroblast growth factor receptor 1##FJ809917|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174063|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174064|FGFR1|2260|fibroblast growth factor receptor 1##NM_015850|FGFR1|2260|fibroblast growth factor receptor 1##NM_023105|FGFR1|2260|fibroblast growth factor receptor 1##NM_023106|FGFR1|2260|fibroblast growth factor receptor 1##NM_023110|FGFR1|2260|fibroblast growth factor receptor 1##BC018128|FGFR1|2260|fibroblast growth factor receptor 1##M60485|FGFR1|2260|fibroblast growth factor receptor 1##X66945|FGFR1|2260|fibroblast growth factor receptor 1##AB208919|FGFR1|2260|fibroblast growth factor receptor 1##BC015035|FGFR1|2260|fibroblast growth factor receptor 1##AK222718|FGFR1|2260|fibroblast growth factor receptor 1##AK223126|FGFR1|2260|fibroblast growth factor receptor 1##BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072874|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072875|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK308849|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1	0.0	
chr11	128672662	128672796	reg1025128.p1	4.956	+	TSC_hg19_v1_chr11_+_128564132 AB385119 AY029368 CU674822 DQ892582 DQ896858	-108587	+	TSC_hg19_v1_chr11_+_128563997 X67001 S45205 BC010115 BC001670	-108674	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	-108749	+	BC136360 BC136361 BC074752 NM_000220 U12541 AK314267 AK290797	39649	-	U12544 U12545 AK308032 U12543 U03884 AK308033 BC063109 NM_153764 NM_153765 NM_153766 NM_153767 U12542	64470	-	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	88611	+	AY029368|FLI1|2313|Friend leukemia virus integration 1##DQ892582|FLI1|2313|Friend leukemia virus integration 1##DQ896858|FLI1|2313|Friend leukemia virus integration 1##X67001|FLI1|2313|Friend leukemia virus integration 1##S45205|FLI1|2313|Friend leukemia virus integration 1##BC010115|FLI1|2313|Friend leukemia virus integration 1##BC001670|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1##BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5	0.445237	CTCF.p2:-5:0.445
chr13	32525396	32525576	reg1026578.p1	4.956	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-104584	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-211773	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-751276	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	79955	+	BC146956 BC146965 NM_001136571	360603	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	364131	+	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset	0.0	
chr14	54970319	54970477	reg1030365.p1	4.956	+	TSC_hg19_v1_chr14_-_54955728 AB001106 BX647679 NM_004124	-14643	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	-14713	-	TSC_hg19_v1_chr14_-_54908095 BX248284 AY358635 AK074781 AK307074 AK311897 AF070654 AF104398 NM_005776 BC103741	-62282	-	AK315318 AK289478 TSC_hg19_v1_chr14_+_54976623 NM_006568 BC015063 U66469 CU677207 EU832831 GQ129438	6213	+	NM_001161576 NM_015589 BC057838 TSC_hg19_v1_chr14_+_55034359	63946	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	64238	+	AB001106|GMFB|2764|glia maturation factor, beta##BX647679|GMFB|2764|glia maturation factor, beta##NM_004124|GMFB|2764|glia maturation factor, beta##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta##BX248284|CNIH|10175|cornichon homolog (Drosophila)##AY358635|CNIH|10175|cornichon homolog (Drosophila)##AK074781|CNIH|10175|cornichon homolog (Drosophila)##AK307074|CNIH|10175|cornichon homolog (Drosophila)##AK311897|CNIH|10175|cornichon homolog (Drosophila)##AF070654|CNIH|10175|cornichon homolog (Drosophila)##AF104398|CNIH|10175|cornichon homolog (Drosophila)##NM_005776|CNIH|10175|cornichon homolog (Drosophila)##BC103741|CNIH|10175|cornichon homolog (Drosophila)##AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1##AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1##NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1##BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1##U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1##EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1##GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1##NM_001161576|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_015589|SAMD4A|23034|sterile alpha motif domain containing 4A##BC057838|SAMD4A|23034|sterile alpha motif domain containing 4A##AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A	0.78511	CTCF.p2:11:0.785
chr15	58513965	58514065	reg1030063.p1	4.956	+	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	-83529	+	NM_001206897 NM_003888 NM_170696	-155895	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	-156137	-	NM_000236 X07228 AK293324 AK309448 TSC_hg19_v1_chr15_+_58724189 D83548 BC132825 BC136495 J03895 J03540 AB528021 HQ258274	210187	+	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	527774	-	TSC_hg19_v1_chr15_-_59041833 AK300472	527807	-	AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_000236|LIPC|3990|lipase, hepatic##X07228|LIPC|3990|lipase, hepatic##AK293324|LIPC|3990|lipase, hepatic##AK309448|LIPC|3990|lipase, hepatic##D83548|LIPC|3990|lipase, hepatic##BC132825|LIPC|3990|lipase, hepatic##BC136495|LIPC|3990|lipase, hepatic##J03895|LIPC|3990|lipase, hepatic##J03540|LIPC|3990|lipase, hepatic##HQ258274|LIPC|3990|lipase, hepatic##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10##AK300472|ADAM10|102|ADAM metallopeptidase domain 10	0.171072	
chr16	78471382	78471498	reg1033579.p1	4.956	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-337985	+	NM_001244755	-408455	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	-414990	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	1163175	-	AF125108 NM_130897 BC054892 BC035232	2103448	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	2366607	-	NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2	0.905609	CTCF.p2:3:0.906
chrX	114987562	114987743	reg1006545.p2	4.956	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-159784	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-190610	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-192046	+	BC003645 TSC_hg19_v1_chrX_-_115085443	97787	-	AK313927 NM_000686 X87723 U16957	314343	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	580115	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr12	45524717	45524826	reg1028244.p1	4.955	+	AK131230 NM_001004329 TSC_hg19_v1_chr12_-_45444883	-79889	-	AK295125 NM_001145110	-217061	-	AK299733 NM_001145107	-254139	-	TSC_hg19_v1_chr12_+_45609769 AK126409 NM_001025356 NM_001142679 NM_001204803 AK310641	85013	+	TSC_hg19_v1_chr12_+_45609845 AK303996	85078	+	TSC_hg19_v1_chr12_+_45609867 AK302819 NM_001142680	85100	+	AK131230|DBX2|440097|developing brain homeobox 2##NM_001004329|DBX2|440097|developing brain homeobox 2##AK295125|NELL2|4753|NEL-like 2 (chicken)##NM_001145110|NELL2|4753|NEL-like 2 (chicken)##AK299733|NELL2|4753|NEL-like 2 (chicken)##NM_001145107|NELL2|4753|NEL-like 2 (chicken)##AK126409|ANO6|196527|anoctamin 6##NM_001025356|ANO6|196527|anoctamin 6##NM_001142679|ANO6|196527|anoctamin 6##NM_001204803|ANO6|196527|anoctamin 6##AK310641|ANO6|196527|anoctamin 6##AK303996|ANO6|196527|anoctamin 6##AK302819|ANO6|196527|anoctamin 6##NM_001142680|ANO6|196527|anoctamin 6	0.983129	CTCF.p2:-14:0.983
chr3	105970483	105970601	reg1025333.p1	4.955	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-382735	-	CR749655 TSC_hg19_v1_chr3_-_105421064	-549488	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-884720	+	TSC_hg19_v1_chr3_-_106959482 BC036229	988937	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	989050	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	1125768	+	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54	0.948556	CTCF.p2:36:0.949
chr7	128763367	128763465	reg1029923.p3	4.955	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-68211	-	TSC_hg19_v1_chr7_-_128695168 BC009923	-68268	-	AJ133769 AF145029 TSC_hg19_v1_chr7_-_128694965 AK312580 BC068530	-68521	-	BC009989 NM_005631	65296	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	101413	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	244570	+	AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3##AJ133769|TNPO3|23534|transportin 3##AF145029|TNPO3|23534|transportin 3##AK312580|TNPO3|23534|transportin 3##BC068530|TNPO3|23534|transportin 3##BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2	0.0	
chr9	130892383	130892517	reg1027694.p2	4.955	+	TSC_hg19_v1_chr9_-_130890404 NM_025072	-2013	-	TSC_hg19_v1_chr9_-_130890034 BC011613	-2350	-	AK024100 TSC_hg19_v1_chr9_-_130890009	-2442	-	AK301694 AK316217 NM_005564 TSC_hg19_v1_chr9_+_130911731 AK307311 BC033089 X83006 AB591011 CR542092 EU644752 S75256	19347	+	TSC_hg19_v1_chr9_+_130922543 NM_024112 AK315753 BC001857 BC008887 AK311245	30128	+	TSC_hg19_v1_chr9_-_130953862 AB030835 BC021163 AK027287 AK303288 AK303636 AK292713 AK316393 NM_001131016 NM_001131017 NM_001131018	61380	-	NM_025072|PTGES2|80142|prostaglandin E synthase 2##BC011613|PTGES2|80142|prostaglandin E synthase 2##AK024100|PTGES2|80142|prostaglandin E synthase 2##AK301694|LCN2|3934|lipocalin 2##AK316217|LCN2|3934|lipocalin 2##NM_005564|LCN2|3934|lipocalin 2##BC033089|LCN2|3934|lipocalin 2##X83006|LCN2|3934|lipocalin 2##CR542092|LCN2|3934|lipocalin 2##EU644752|LCN2|3934|lipocalin 2##S75256|LCN2|3934|lipocalin 2##NM_024112|C9orf16|79095|chromosome 9 open reading frame 16##AK315753|C9orf16|79095|chromosome 9 open reading frame 16##BC001857|C9orf16|79095|chromosome 9 open reading frame 16##BC008887|C9orf16|79095|chromosome 9 open reading frame 16##AB030835|CIZ1|25792|CDKN1A interacting zinc finger protein 1##BC021163|CIZ1|25792|CDKN1A interacting zinc finger protein 1##AK027287|CIZ1|25792|CDKN1A interacting zinc finger protein 1##AK303288|CIZ1|25792|CDKN1A interacting zinc finger protein 1##AK303636|CIZ1|25792|CDKN1A interacting zinc finger protein 1##AK292713|CIZ1|25792|CDKN1A interacting zinc finger protein 1##AK316393|CIZ1|25792|CDKN1A interacting zinc finger protein 1##NM_001131016|CIZ1|25792|CDKN1A interacting zinc finger protein 1##NM_001131017|CIZ1|25792|CDKN1A interacting zinc finger protein 1##NM_001131018|CIZ1|25792|CDKN1A interacting zinc finger protein 1	0.830068	CTCF.p2:1:0.830
chr11	60530399	60530551	reg1029291.p1	4.954	+	NM_001098835 NM_152717 AK300233 BC031610 AK091846 AX747218 AY584608 AY584609	-6066	+	AF237905 NM_031457 AK310969 AK310884 AK315901 BC022895 AK308413 AF350504 AK310872	-63343	+	AY324188 AY324189 AY324190 NM_001012417 NM_001100909 BC140799 BC171746	-247527	+	AK122633 NM_206893 BC137259 BC137263	22370	+	NM_024098 TSC_hg19_v1_chr11_+_60609543 AK025974 AK302329 AK123775 BC001378 DQ892603 DQ895844 DQ501251	79046	+	AF144308 AK291371 AK313849 TSC_hg19_v1_chr11_-_60623424 AB008535 NM_004778	92957	-	NM_001098835|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##NM_152717|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK300233|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##BC031610|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK091846|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584608|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584609|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AF237905|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_031457|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310969|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310884|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK315901|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##BC022895|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK308413|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AF350504|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310872|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AY324188|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324189|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324190|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001012417|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001100909|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC140799|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC171746|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AK122633|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_206893|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137259|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137263|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_024098|CCDC86|79080|coiled-coil domain containing 86##AK025974|CCDC86|79080|coiled-coil domain containing 86##AK302329|CCDC86|79080|coiled-coil domain containing 86##AK123775|CCDC86|79080|coiled-coil domain containing 86##BC001378|CCDC86|79080|coiled-coil domain containing 86##DQ892603|CCDC86|79080|coiled-coil domain containing 86##DQ895844|CCDC86|79080|coiled-coil domain containing 86##DQ501251|CCDC86|79080|coiled-coil domain containing 86##AF144308|PTGDR2|11251|prostaglandin D2 receptor 2##AK291371|PTGDR2|11251|prostaglandin D2 receptor 2##AK313849|PTGDR2|11251|prostaglandin D2 receptor 2##AB008535|PTGDR2|11251|prostaglandin D2 receptor 2##NM_004778|PTGDR2|11251|prostaglandin D2 receptor 2	0.028597	
chr1	25566474	25566606	reg1026365.p1	4.954	+	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	-7553	-	BC013362 AK310945 NM_001031680 AF022726	-274998	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-309754	-	BC065040 TSC_hg19_v1_chr1_-_25573922	7383	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	7433	-	AK297151 NM_001127691 NM_016124 X63094 BC139922 AF510069 AF510070 AF312679 Z97026 DQ451878 X63097 AB018966 AB018967 AB018968 AB018969 AB037270 AB046420 AB049754 AF037626 AF177938 AF187846 AJ704215 AM183924 AY449381 AY449382 AY449383 AY449384 AY449385 AY751491 AY751492 AY751493 AY751494 AY751495 AY751496 FR745438 FR745439 FR745440 FR745441 JF436967 L08429 S57971 S70174 S73913 S78509 S82449 EU557240 EU557241 EU661905 EU661906	32452	+	DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63##AK297151|RHD|6007|Rh blood group, D antigen##NM_001127691|RHD|6007|Rh blood group, D antigen##NM_016124|RHD|6007|Rh blood group, D antigen##X63094|RHD|6007|Rh blood group, D antigen##BC139922|RHD|6007|Rh blood group, D antigen##AF510069|RHD|6007|Rh blood group, D antigen##AF510070|RHD|6007|Rh blood group, D antigen##AF312679|RHD|6007|Rh blood group, D antigen##Z97026|RHD|6007|Rh blood group, D antigen##DQ451878|RHD|6007|Rh blood group, D antigen##X63097|RHD|6007|Rh blood group, D antigen##AB018966|RHD|6007|Rh blood group, D antigen##AB018967|RHD|6007|Rh blood group, D antigen##AB018968|RHD|6007|Rh blood group, D antigen##AB018969|RHD|6007|Rh blood group, D antigen##AB037270|RHD|6007|Rh blood group, D antigen##AB046420|RHD|6007|Rh blood group, D antigen##AB049754|RHD|6007|Rh blood group, D antigen##AF037626|RHD|6007|Rh blood group, D antigen##AF177938|RHD|6007|Rh blood group, D antigen##AF187846|RHD|6007|Rh blood group, D antigen##AJ704215|RHD|6007|Rh blood group, D antigen##AM183924|RHD|6007|Rh blood group, D antigen##AY449381|RHD|6007|Rh blood group, D antigen##AY449382|RHD|6007|Rh blood group, D antigen##AY449383|RHD|6007|Rh blood group, D antigen##AY449384|RHD|6007|Rh blood group, D antigen##AY449385|RHD|6007|Rh blood group, D antigen##AY751491|RHD|6007|Rh blood group, D antigen##AY751492|RHD|6007|Rh blood group, D antigen##AY751493|RHD|6007|Rh blood group, D antigen##AY751494|RHD|6007|Rh blood group, D antigen##AY751495|RHD|6007|Rh blood group, D antigen##AY751496|RHD|6007|Rh blood group, D antigen##FR745438|RHD|6007|Rh blood group, D antigen##FR745439|RHD|6007|Rh blood group, D antigen##FR745440|RHD|6007|Rh blood group, D antigen##FR745441|RHD|6007|Rh blood group, D antigen##L08429|RHD|6007|Rh blood group, D antigen##S57971|RHD|6007|Rh blood group, D antigen##S70174|RHD|6007|Rh blood group, D antigen##S73913|RHD|6007|Rh blood group, D antigen##S78509|RHD|6007|Rh blood group, D antigen##S82449|RHD|6007|Rh blood group, D antigen##EU557240|RHD|6007|Rh blood group, D antigen##EU557241|RHD|6007|Rh blood group, D antigen##EU661905|RHD|6007|Rh blood group, D antigen##EU661906|RHD|6007|Rh blood group, D antigen	0.527479	CTCF.p2:13:0.527
chr7	133539677	133539761	reg1029859.p3	4.954	+	TSC_hg19_v1_chr7_+_132937838 NM_001037126 NM_021807 AF380839 AK027688 AL831989 AK298191 BC067263 BC026174 CU693148 AB051486	-601870	+	TSC_hg19_v1_chr7_-_132766851 BC011596 BC014839 AK129533	-772873	-	AB528286 TSC_hg19_v1_chr7_-_132766813 AK294071 AK000427 NM_017812 AK310236	-772955	-	BC104897 BC104899 AK057348 NM_144648	272358	+	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	461904	-	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	462068	-	NM_001037126|EXOC4|60412|exocyst complex component 4##NM_021807|EXOC4|60412|exocyst complex component 4##AF380839|EXOC4|60412|exocyst complex component 4##AK027688|EXOC4|60412|exocyst complex component 4##AL831989|EXOC4|60412|exocyst complex component 4##AK298191|EXOC4|60412|exocyst complex component 4##BC067263|EXOC4|60412|exocyst complex component 4##BC026174|EXOC4|60412|exocyst complex component 4##AB051486|EXOC4|60412|exocyst complex component 4##BC011596|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC014839|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK129533|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK294071|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK000427|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##NM_017812|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK310236|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4	0.024005	
chr10	125173005	125173100	reg1026956.p1	4.953	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-258696	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-259106	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-259154	+	AJ505757 NM_153442 BC112011 BC113462	252825	+	BC137492 BC146862 AY358565 NM_198148	478444	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	678847	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.048709	
chr11	120493016	120493157	reg1023042.p1	4.953	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-110621	+	BC063117 NM_001198665 NM_015313	-285469	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	-285982	+	AB384776 NM_014619 S67803	37941	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	401724	+	NM_005422	480288	+	AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha	0.385453	CTCF.p2:-3:0.385
chr1	47641280	47641379	reg1005228.p2	4.953	+	TSC_hg19_v1_chr1_+_47603114 BC148248 AY280371 NM_001010969 BC142690 BC142607 AY280372	-38207	+	AY358631 AK292175 AY262056 NM_178134 AB527374	-108225	+	BC028102 NM_178033 AK098065 AY358537 AM040940 DQ891655 DQ891656 DQ894843 EU176287 CU688398	-151966	+	CR450304 CU680280 BC012303 TSC_hg19_v1_chr1_-_47655693	14319	-	TSC_hg19_v1_chr1_-_47655728 NM_005764	14417	-	M61108 NM_003189	54113	-	BC148248|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280371|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##NM_001010969|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142690|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142607|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280372|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY358631|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##AK292175|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##AY262056|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##NM_178134|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##BC028102|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##NM_178033|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AK098065|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AY358537|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AM040940|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891655|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891656|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ894843|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##EU176287|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##CR450304|PDZK1IP1|10158|PDZK1 interacting protein 1##BC012303|PDZK1IP1|10158|PDZK1 interacting protein 1##NM_005764|PDZK1IP1|10158|PDZK1 interacting protein 1##M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1##NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1	0.0	
chr16	81503524	81503704	reg1029028.p1	4.953	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-24781	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-154964	+	TSC_hg19_v1_chr16_+_81348566 AK095378 NM_022041 AF291673	-155045	+	AY172689 NM_030629	25339	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	309283	+	TSC_hg19_v1_chr16_+_81812901 AB208914	309288	+	NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##AK095378|GAN|8139|gigaxonin##NM_022041|GAN|8139|gigaxonin##AF291673|GAN|8139|gigaxonin##AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr21	45358557	45358697	reg1001021.p2	4.953	+	AK300562 NM_001037553	-13349	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	-73504	+	TSC_hg19_v1_chr21_+_45285029 AY358704	-73567	+	TSC_hg19_v1_chr21_+_45432211 BC071569 NM_003274 U61500 BC046241 BC052247 BC094823 U19252 BC101728 AB385171 CU692332	73713	+	TSC_hg19_v1_chr21_+_45527202 AK314184	168575	+	TSC_hg19_v1_chr21_+_45527251 NM_005049	168601	+	AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC071569|TRAPPC10|7109|trafficking protein particle complex 10##NM_003274|TRAPPC10|7109|trafficking protein particle complex 10##U61500|TRAPPC10|7109|trafficking protein particle complex 10##BC046241|TRAPPC10|7109|trafficking protein particle complex 10##BC052247|TRAPPC10|7109|trafficking protein particle complex 10##BC094823|TRAPPC10|7109|trafficking protein particle complex 10##U19252|TRAPPC10|7109|trafficking protein particle complex 10##BC101728|TRAPPC10|7109|trafficking protein particle complex 10##AK314184|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##NM_005049|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)	0.0	
chr6	11786491	11786671	reg1027887.p3	4.953	+	NM_001143948 NM_032744	-7302	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-248083	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-404041	-	NM_002114	226142	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	504012	+	TSC_hg19_v1_chr6_+_12514301 D28417	727721	+	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr6_dbb_hap3	1858883	1858996	reg1030331.p2	4.953	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.147186	
chr8	29266206	29266335	reg1020075.p2	4.953	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-58200	-	AL137704 NM_057158	-59949	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-145656	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	674204	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	674302	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	686673	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chr9	37409125	37409306	reg1026307.p1	4.953	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-288632	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-288707	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-288729	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	13491	+	BC010007 TSC_hg19_v1_chr9_-_37465267	56045	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	56180	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.0	
chr10	12306495	12306676	reg1008410.p2	4.952	+	TSC_hg19_v1_chr10_+_12238212 BC001600 AK289362 CR456966	-68359	+	TSC_hg19_v1_chr10_+_12238194 BC009598	-68386	+	TSC_hg19_v1_chr10_+_12238186 U27112 AK308790	-68403	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	84990	+	TSC_hg19_v1_chr10_+_12391709 BC035745	85132	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	85192	+	BC001600|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289362|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##CR456966|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##BC009598|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##U27112|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK308790|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID	0.0	
chr10	50720398	50720528	reg1031865.p1	4.952	+	NM_001080520	-120557	-	AK127811 NM_001135196 NM_199459 TSC_hg19_v1_chr10_+_50507214 AL833265	-213252	+	DQ884399 TSC_hg19_v1_chr10_-_50396437 BC047724 BC104438 BC104439 NM_001010863 BC037922 BC042857 AK303891	-324037	-	BC028954 AK074682 BC063690 NM_170753	11787	-	TSC_hg19_v1_chr10_-_50747072 BC127104 L04791	26594	-	TSC_hg19_v1_chr10_-_50747117 AK291018 NM_000124	26662	-	NM_001080520|DRGX|644168|dorsal root ganglia homeobox##AK127811|C10orf71|118461|chromosome 10 open reading frame 71##NM_001135196|C10orf71|118461|chromosome 10 open reading frame 71##NM_199459|C10orf71|118461|chromosome 10 open reading frame 71##AL833265|C10orf71|118461|chromosome 10 open reading frame 71##DQ884399|C10orf128|170371|chromosome 10 open reading frame 128##BC047724|C10orf128|170371|chromosome 10 open reading frame 128##BC104438|C10orf128|170371|chromosome 10 open reading frame 128##BC104439|C10orf128|170371|chromosome 10 open reading frame 128##NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128##BC037922|C10orf128|170371|chromosome 10 open reading frame 128##BC042857|C10orf128|170371|chromosome 10 open reading frame 128##BC028954|PGBD3|267004|piggyBac transposable element derived 3##AK074682|PGBD3|267004|piggyBac transposable element derived 3##BC063690|PGBD3|267004|piggyBac transposable element derived 3##NM_170753|PGBD3|267004|piggyBac transposable element derived 3##BC127104|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6##L04791|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6##AK291018|PGBD3|267004|piggyBac transposable element derived 3##NM_000124|ERCC6|2074|excision repair cross-complementing rodent repair deficiency, complementation group 6	0.90337	CTCF.p2:10:0.903
chr16	50170456	50170594	reg1030566.p1	4.952	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	-70565	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	-70632	+	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	-111385	+	TSC_hg19_v1_chr16_+_50186838 AK300918 NM_001040284 NM_001040285	16310	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	129951	+	TSC_hg19_v1_chr16_+_50308041 BC039891	137528	+	AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##AK300918|PAPD5|64282|PAP associated domain containing 5##NM_001040284|PAPD5|64282|PAP associated domain containing 5##NM_001040285|PAPD5|64282|PAP associated domain containing 5##AK093706|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7	0.0	
chr19	53073774	53073954	reg1024836.p2	4.952	+	TSC_hg19_v1_chr19_+_53073539 NM_018260 AK001753 BC131719 BC136425 BC136426 BC054884 BC080612	-322	+	CR749856 TSC_hg19_v1_chr19_+_53030941 NM_001039886	-42935	+	AB091373 AB091374 AK299106 NM_001099694 TSC_hg19_v1_chr19_+_52956836 AL833487 AB091376 AB091375	-117037	+	BC067346 NM_001172655	52	+	TSC_hg19_v1_chr19_-_53141603 BC032867 AK027518 NM_001105549 NM_001105550 NM_001105551 NM_001105552 NM_001105553 NM_001105554 NM_018300	67760	-	TSC_hg19_v1_chr19_-_53193740 AK289399 AK075066 NM_001242531 NM_001242538	119946	-	NM_018260|ZNF701|55762|zinc finger protein 701##AK001753|ZNF701|55762|zinc finger protein 701##BC131719|ZNF701|55762|zinc finger protein 701##BC136425|ZNF701|55762|zinc finger protein 701##BC136426|ZNF701|55762|zinc finger protein 701##BC054884|ZNF701|55762|zinc finger protein 701##BC080612|ZNF701|55762|zinc finger protein 701##CR749856|ZNF808|388558|zinc finger protein 808##NM_001039886|ZNF808|388558|zinc finger protein 808##AB091373|ZNF578|147660|zinc finger protein 578##AB091374|ZNF578|147660|zinc finger protein 578##AK299106|ZNF578|147660|zinc finger protein 578##NM_001099694|ZNF578|147660|zinc finger protein 578##AB091376|ZNF578|147660|zinc finger protein 578##AB091375|ZNF578|147660|zinc finger protein 578##BC067346|ZNF701|55762|zinc finger protein 701##NM_001172655|ZNF701|55762|zinc finger protein 701##BC032867|ZNF83|55769|zinc finger protein 83##AK027518|ZNF83|55769|zinc finger protein 83##NM_001105549|ZNF83|55769|zinc finger protein 83##NM_001105550|ZNF83|55769|zinc finger protein 83##NM_001105551|ZNF83|55769|zinc finger protein 83##NM_001105552|ZNF83|55769|zinc finger protein 83##NM_001105553|ZNF83|55769|zinc finger protein 83##NM_001105554|ZNF83|55769|zinc finger protein 83##NM_018300|ZNF83|55769|zinc finger protein 83##AK289399|ZNF83|55769|zinc finger protein 83##AK075066|ZNF83|55769|zinc finger protein 83##NM_001242531|ZNF83|55769|zinc finger protein 83##NM_001242538|ZNF83|55769|zinc finger protein 83	0.0	
chr12	57856456	57856570	reg1012817.p1	4.951	+	AK297899 NM_001160045 NM_001167609 NM_005269 X07384 AB239135 AB239136	-2571	+	TSC_hg19_v1_chr12_+_57849089 NM_031479 AK075285 BC005161 AF412024	-7415	+	TSC_hg19_v1_chr12_+_57828511 AK314849 BC020693 NM_005538 X82540 BC130324 BC130326 AB590801	-27950	+	AK301095 AK057573 AB030239 NM_001080156	15166	-	TSC_hg19_v1_chr12_-_57873391 AK092763 AX747713 NM_001080157	16881	-	AK304107 AB051853 NM_032496	17117	-	AK297899|GLI1|2735|GLI family zinc finger 1##NM_001160045|GLI1|2735|GLI family zinc finger 1##NM_001167609|GLI1|2735|GLI family zinc finger 1##NM_005269|GLI1|2735|GLI family zinc finger 1##X07384|GLI1|2735|GLI family zinc finger 1##AB239135|GLI1|2735|GLI family zinc finger 1##AB239136|GLI1|2735|GLI family zinc finger 1##NM_031479|INHBE|83729|inhibin, beta E##AK075285|INHBE|83729|inhibin, beta E##BC005161|INHBE|83729|inhibin, beta E##AF412024|INHBE|83729|inhibin, beta E##AK314849|INHBC|3626|inhibin, beta C##BC020693|INHBC|3626|inhibin, beta C##NM_005538|INHBC|3626|inhibin, beta C##BC130324|INHBC|3626|inhibin, beta C##BC130326|INHBC|3626|inhibin, beta C##AK301095|ARHGAP9|64333|Rho GTPase activating protein 9##AK057573|ARHGAP9|64333|Rho GTPase activating protein 9##AB030239|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080156|ARHGAP9|64333|Rho GTPase activating protein 9##AK092763|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9##AK304107|ARHGAP9|64333|Rho GTPase activating protein 9##AB051853|ARHGAP9|64333|Rho GTPase activating protein 9##NM_032496|ARHGAP9|64333|Rho GTPase activating protein 9	0.06954	
chr1	32281781	32281862	reg1011208.p2	4.951	+	BC114430 AK131447 NM_144569 AK091016 AX746730	-222	-	TSC_hg19_v1_chr1_-_32264318 AK095829	-17500	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	-17581	-	NM_001195100 NM_001195101	103437	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	122110	-	TSC_hg19_v1_chr1_-_32403992 NM_080391	122176	-	BC114430|SPOCD1|90853|SPOC domain containing 1##AK131447|SPOCD1|90853|SPOC domain containing 1##NM_144569|SPOCD1|90853|SPOC domain containing 1##AK091016|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2	0.876344	
chr15	66155039	66155219	reg1029003.p1	4.951	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-70536	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	-70656	-	AF062922 NM_004727	-240860	+	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	6718	+	TSC_hg19_v1_chr15_-_66321664 AK054827	166564	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	390948	-	AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11	0.245233	CTCF.p2:10:0.245
chr16	81855130	81855311	reg1027066.p1	4.951	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-42290	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-42318	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	-42323	+	BC019670 AK315652 AK026740 NM_145168	189848	-	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	213641	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	213712	+	BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.0	
chr17	56421809	56421989	reg1016913.p1	4.951	+	TSC_hg19_v1_chr17_+_56414668 AK000271 BC050403 BC032475	-7210	+	AK311306 TSC_hg19_v1_chr17_+_56414566 BC064565	-7330	+	AX721088 TSC_hg19_v1_chr17_-_56409882	-12022	-	AB527904 CR407663 EU446710 TSC_hg19_v1_chr17_-_56429531 AK311986 U38817 BC002802 U38818 NM_003168 U43923 AK129758	7637	-	AB527734 TSC_hg19_v1_chr17_-_56492959 AK296769 AK000322 BC109028	71137	-	TSC_hg19_v1_chr17_-_56494896 CR749257	72994	-	AK000271|LOC100506779|100506779|uncharacterized LOC100506779##BC050403|LOC100506779|100506779|uncharacterized LOC100506779##BC032475|LOC100506779|100506779|uncharacterized LOC100506779##AK311306|LOC100506779|100506779|uncharacterized LOC100506779##BC064565|LOC100506779|100506779|uncharacterized LOC100506779##CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK296769|RNF43|54894|ring finger protein 43##AK000322|RNF43|54894|ring finger protein 43##BC109028|RNF43|54894|ring finger protein 43##CR749257|RNF43|54894|ring finger protein 43	0.0	
chr19	14688916	14689096	reg1021441.p2	4.951	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	-6157	-	TSC_hg19_v1_chr19_+_14640435 AK001416 AK315412 BC007801 BC013881 BC005952 AF038958 BC002425 BC034484 AF222742 AX771269 AF038959 AB529027 DQ891949 DQ895135 EU832830 GQ129437	-48547	+	AK094087 TSC_hg19_v1_chr19_+_14640406	-48600	+	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	4908	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	96671	-	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	111758	+	CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AK001416|TECR|9524|trans-2,3-enoyl-CoA reductase##AK315412|TECR|9524|trans-2,3-enoyl-CoA reductase##BC007801|TECR|9524|trans-2,3-enoyl-CoA reductase##BC013881|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005952|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038958|TECR|9524|trans-2,3-enoyl-CoA reductase##BC002425|TECR|9524|trans-2,3-enoyl-CoA reductase##BC034484|TECR|9524|trans-2,3-enoyl-CoA reductase##AF222742|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038959|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ891949|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ895135|TECR|9524|trans-2,3-enoyl-CoA reductase##EU832830|TECR|9524|trans-2,3-enoyl-CoA reductase##GQ129437|TECR|9524|trans-2,3-enoyl-CoA reductase##AK094087|TECR|9524|trans-2,3-enoyl-CoA reductase##NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333	0.0	
chr2	223185097	223185163	reg1027982.p2	4.951	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	-21605	-	AK057009 NM_153038 BC109388	-22218	+	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	-26110	-	TSC_hg19_v1_chr2_+_223289261 AK314322	104110	+	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	104177	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	335664	-	EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK314322|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit	0.0	
chr20	33543686	33543789	reg1029372.p2	4.950	+	NM_020884	-34	+	TSC_hg19_v1_chr20_-_33543587 AK311421 AK312492 BC007927 NM_000178	-146	-	TSC_hg19_v1_chr20_-_33543562 AK293144 L42531 U34683 AK311567	-173	-	TSC_hg19_v1_chr20_-_33680592 AB590540 CU680522 BC013144	136735	-	TSC_hg19_v1_chr20_-_33680600 AK074106	136859	-	TSC_hg19_v1_chr20_-_33680611 AK298958 AK303476 AK315582 NM_015638 NM_199368	136903	-	NM_020884|MYH7B|57644|myosin, heavy chain 7B, cardiac muscle, beta##AK311421|GSS|2937|glutathione synthetase##AK312492|GSS|2937|glutathione synthetase##BC007927|GSS|2937|glutathione synthetase##NM_000178|GSS|2937|glutathione synthetase##AK293144|GSS|2937|glutathione synthetase##U34683|GSS|2937|glutathione synthetase##AK311567|GSS|2937|glutathione synthetase##BC013144|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK074106|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK298958|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK303476|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK315582|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##NM_015638|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##NM_199368|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein	0.117488	
chr4	128400337	128400428	reg1026598.p2	4.950	+	NM_024582	-2162816	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	-2766568	-	AK026960 BC063856 NM_005841	-4079709	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	153757	+	TSC_hg19_v1_chr4_+_128651573 NM_031291 AL136857 AY550240 BC022032 AB528294 AM393262 CU692468 AJ863129	251227	+	TSC_hg19_v1_chr4_+_128703445 BC040560 NM_014278	303051	+	NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##NM_031291|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AL136857|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AY550240|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC022032|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AM393262|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AJ863129|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC040560|HSPA4L|22824|heat shock 70kDa protein 4-like##NM_014278|HSPA4L|22824|heat shock 70kDa protein 4-like	0.987209	CTCF.p2:-2:0.987
chr6	28464025	28464131	reg1025341.p2	4.950	+	AK309235 AL833347 AK092117 AX747363 NM_001012455	-52825	-	TSC_hg19_v1_chr6_-_28367519 BC041661 AB007886 NM_001163391	-96557	-	TSC_hg19_v1_chr6_+_28317723 AK091225 AX746861 NM_001242894 NM_001242895 NM_024493 AK122790 AK313532 BC006118	-146352	+	BC133691 BC148315 AY324826 NM_182701	19488	-	AJ005277 BC128159 BC128160 NM_001509 NM_003996 AB463692	29710	+	AK056369 BX647791 AY517631 NM_052923	91010	-	AK309235|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AL833347|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AK092117|ZSCAN23|222696|zinc finger and SCAN domain containing 23##NM_001012455|ZSCAN23|222696|zinc finger and SCAN domain containing 23##BC041661|ZSCAN12|9753|zinc finger and SCAN domain containing 12##AB007886|ZSCAN12|9753|zinc finger and SCAN domain containing 12##NM_001163391|ZSCAN12|9753|zinc finger and SCAN domain containing 12##AK091225|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001242894|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001242895|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_024493|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##AK122790|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##AK313532|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##BC006118|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##BC133691|GPX6|257202|glutathione peroxidase 6 (olfactory)##BC148315|GPX6|257202|glutathione peroxidase 6 (olfactory)##AY324826|GPX6|257202|glutathione peroxidase 6 (olfactory)##NM_182701|GPX6|257202|glutathione peroxidase 6 (olfactory)##AJ005277|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC128159|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC128160|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##NM_001509|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##NM_003996|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##AK056369|SCAND3|114821|SCAN domain containing 3##BX647791|SCAND3|114821|SCAN domain containing 3##AY517631|SCAND3|114821|SCAN domain containing 3##NM_052923|SCAND3|114821|SCAN domain containing 3	0.628376	CTCF.p2:-9:0.628
chr11	67044933	67045078	reg1026012.p3	4.949	+	TSC_hg19_v1_chr11_+_67034167 CU691526 DQ891148 DQ894328	-10832	+	TSC_hg19_v1_chr11_+_67034155 M80776	-10852	+	TSC_hg19_v1_chr11_+_67033929 BC037963 BC090863	-11071	+	NM_207354 TSC_hg19_v1_chr11_+_67056786 BC110419	11769	+	TSC_hg19_v1_chr11_+_67056815 AK124721 AK096277 AK126438	11838	+	NM_017857 TSC_hg19_v1_chr11_+_67070955 AK000522	25936	+	DQ891148|ADRBK1|156|adrenergic, beta, receptor kinase 1##DQ894328|ADRBK1|156|adrenergic, beta, receptor kinase 1##M80776|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC037963|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC090863|ADRBK1|156|adrenergic, beta, receptor kinase 1##NM_207354|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##BC110419|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK124721|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK096277|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK126438|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##NM_017857|SSH3|54961|slingshot homolog 3 (Drosophila)##AK000522|SSH3|54961|slingshot homolog 3 (Drosophila)	0.0	
chr15	42677799	42677903	reg1026939.p1	4.949	+	NM_000070 NM_024344 NM_173087 AK308103 AF127764 AF127765 BC146649 BC146672	-26111	+	NM_198141 AK301467 AK074037 BC059406 TSC_hg19_v1_chr15_+_42566644 BC093833 BC112051 AF545045 AF545046 AB527148 AM392591 AM393467 BC151223	-111330	+	TSC_hg19_v1_chr15_+_42565784 AK074330	-112032	+	BC003169 NM_173088	16736	+	BC107791 BC004883 NM_173089 NM_173090 BC067126 BC003521 BC100782 BC100783 BC100784 BC128605 BC007810	19141	+	AL831983 BC029366 BC070244 AF205632 BC058023 BC111396 NM_022473 TSC_hg19_v1_chr15_-_42749731 AK294529 AK091929 AX747260	71886	-	NM_000070|CAPN3|825|calpain 3, (p94)##NM_024344|CAPN3|825|calpain 3, (p94)##NM_173087|CAPN3|825|calpain 3, (p94)##AK308103|CAPN3|825|calpain 3, (p94)##AF127764|CAPN3|825|calpain 3, (p94)##AF127765|CAPN3|825|calpain 3, (p94)##BC146649|CAPN3|825|calpain 3, (p94)##BC146672|CAPN3|825|calpain 3, (p94)##NM_198141|GANC|2595|glucosidase, alpha; neutral C##AK301467|GANC|2595|glucosidase, alpha; neutral C##AK074037|GANC|2595|glucosidase, alpha; neutral C##BC059406|GANC|2595|glucosidase, alpha; neutral C##BC093833|GANC|2595|glucosidase, alpha; neutral C##BC112051|GANC|2595|glucosidase, alpha; neutral C##AF545045|GANC|2595|glucosidase, alpha; neutral C##AF545046|GANC|2595|glucosidase, alpha; neutral C##AM392591|GANC|2595|glucosidase, alpha; neutral C##AM393467|GANC|2595|glucosidase, alpha; neutral C##BC151223|GANC|2595|glucosidase, alpha; neutral C##AK074330|GANC|2595|glucosidase, alpha; neutral C##BC003169|CAPN3|825|calpain 3, (p94)##NM_173088|CAPN3|825|calpain 3, (p94)##BC107791|CAPN3|825|calpain 3, (p94)##BC004883|CAPN3|825|calpain 3, (p94)##NM_173089|CAPN3|825|calpain 3, (p94)##NM_173090|CAPN3|825|calpain 3, (p94)##BC067126|CAPN3|825|calpain 3, (p94)##BC003521|CAPN3|825|calpain 3, (p94)##BC100782|CAPN3|825|calpain 3, (p94)##BC100783|CAPN3|825|calpain 3, (p94)##BC100784|CAPN3|825|calpain 3, (p94)##BC128605|CAPN3|825|calpain 3, (p94)##BC007810|CAPN3|825|calpain 3, (p94)##AL831983|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC029366|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC070244|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AF205632|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC058023|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC111396|ZFP106|64397|zinc finger protein 106 homolog (mouse)##NM_022473|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AK294529|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AK091929|ZFP106|64397|zinc finger protein 106 homolog (mouse)	0.119253	
chr15	83199642	83199773	reg1012353.p2	4.949	+	NM_198181 CR936812	-100966	+	CR936602 NM_001164465	-181529	-	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-254817	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	9529	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	40828	-	CU690752 BC050629 NM_030594	116967	-	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	0.924807	CTCF.p2:1:0.925
chr3	177145038	177145219	reg1029701.p2	4.949	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-230069	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	-230177	-	TSC_hg19_v1_chr3_-_176914267 BX648935	-230878	-	BC017825 NM_181361	1109095	+	AF209747 NM_005832	1131424	+	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	1644437	-	AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3	0.0	
chr5	122703570	122703744	reg1029705.p2	4.949	+	NM_001136239 AK297992 AF272898 AF272899	-278813	+	TSC_hg19_v1_chr5_-_122372418 AK304053 NM_000943	-331233	-	CU678110 TSC_hg19_v1_chr5_-_122372375 AK290321 BC002678	-331293	-	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	55487	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	144225	+	BC131507 AB033107 BC151226 NM_020747	1377131	-	NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##AK304053|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##NM_000943|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##AK290321|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##BC002678|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608	0.988288	CTCF.p2:-12:0.988
chr8	8374897	8375000	reg1022697.p2	4.949	+	AK122582 NM_001080826	-135726	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-199060	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-288806	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	184750	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	375990	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	485417	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.994116	CTCF.p2:4:0.979
chr9	91356378	91356512	reg1029483.p2	4.949	+	BC101432 BC101439 BC101440 BC101442 AK098532 NM_001100111	-89406	-	NM_001161625 NM_145283 BC022521	-206428	+	TSC_hg19_v1_chr9_+_91003988 AK315854	-352447	+	AK094842 NM_001001938 NM_001142413 AK127854 BC144432 BC136895 AY333281	249398	+	TSC_hg19_v1_chr9_+_91606382 AK312798 BC060827 NM_005226	249925	+	DQ896663 TSC_hg19_v1_chr9_-_91793449 D84361	437019	-	BC101432|LOC286238|286238|uncharacterized LOC286238##BC101439|LOC286238|286238|uncharacterized LOC286238##BC101440|LOC286238|286238|uncharacterized LOC286238##BC101442|LOC286238|286238|uncharacterized LOC286238##AK098532|LOC286238|286238|uncharacterized LOC286238##NM_001100111|LOC286238|286238|uncharacterized LOC286238##NM_001161625|NXNL2|158046|nucleoredoxin-like 2##NM_145283|NXNL2|158046|nucleoredoxin-like 2##BC022521|NXNL2|158046|nucleoredoxin-like 2##AK315854|SPIN1|10927|spindlin 1##AK094842|C9orf47|286223|chromosome 9 open reading frame 47##NM_001001938|C9orf47|286223|chromosome 9 open reading frame 47##NM_001142413|C9orf47|286223|chromosome 9 open reading frame 47##AK127854|C9orf47|286223|chromosome 9 open reading frame 47##BC144432|C9orf47|286223|chromosome 9 open reading frame 47##BC136895|C9orf47|286223|chromosome 9 open reading frame 47##AY333281|C9orf47|286223|chromosome 9 open reading frame 47##AK312798|S1PR3|1903|sphingosine-1-phosphate receptor 3##BC060827|S1PR3|1903|sphingosine-1-phosphate receptor 3##NM_005226|S1PR3|1903|sphingosine-1-phosphate receptor 3##DQ896663|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##D84361|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	0.774039	CTCF.p2:19:0.774
chr16	9821906	9822040	reg1027935.p1	4.948	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-636370	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-636433	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-764678	-	BC143273 U09002 NM_001134408	453860	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	454215	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	454704	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.171374	
chr2	152810129	152810255	reg1024231.p2	4.948	+	TSC_hg19_v1_chr2_-_152684998 NM_001037174 NM_012097 NM_177985	-125196	-	TSC_hg19_v1_chr2_-_152684936 AF087889 AK298937	-125246	-	TSC_hg19_v1_chr2_-_152684901 AK292714 BC001254	-125289	-	AY054985 AK290049 NM_001005747	20274	-	AK294398 AK316045 TSC_hg19_v1_chr2_-_152955250 NM_001005746	145038	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	145355	-	NM_001037174|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_012097|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_177985|ARL5A|26225|ADP-ribosylation factor-like 5A##AF087889|ARL5A|26225|ADP-ribosylation factor-like 5A##AK298937|ARL5A|26225|ADP-ribosylation factor-like 5A##AK292714|ARL5A|26225|ADP-ribosylation factor-like 5A##BC001254|ARL5A|26225|ADP-ribosylation factor-like 5A##AY054985|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK290049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005747|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	0.081239	
chr22	39162277	39162360	reg1026081.p1	4.948	+	TSC_hg19_v1_chr22_-_39152008 NM_001199579 NM_015374	-10297	-	TSC_hg19_v1_chr22_-_39151986 BC094797	-10326	-	BX537962 NM_001199580 TSC_hg19_v1_chr22_-_39151472	-10854	-	TSC_hg19_v1_chr22_-_39190131 AK290566 BC002968	27805	-	TSC_hg19_v1_chr22_-_39190149 AK223349 AK289744 AL035366 NM_005740	27857	-	TSC_hg19_v1_chr22_-_39239733 AB527378	77463	-	NM_001199579|SUN2|25777|Sad1 and UNC84 domain containing 2##NM_015374|SUN2|25777|Sad1 and UNC84 domain containing 2##BC094797|SUN2|25777|Sad1 and UNC84 domain containing 2##BX537962|SUN2|25777|Sad1 and UNC84 domain containing 2##NM_001199580|SUN2|25777|Sad1 and UNC84 domain containing 2##AK290566|DNAL4|10126|dynein, axonemal, light chain 4##BC002968|DNAL4|10126|dynein, axonemal, light chain 4##AK223349|DNAL4|10126|dynein, axonemal, light chain 4##AL035366|DNAL4|10126|dynein, axonemal, light chain 4##NM_005740|DNAL4|10126|dynein, axonemal, light chain 4	0.119201	
chr2	89626357	89626475	reg1029146.p2	4.948	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-6563	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-113183	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-183827	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	451338	+	TSC_hg19_v1_chr2_+_90211706 Z69013	585302	+	TSC_hg19_v1_chr2_-_91847997 BC030764	2221587	-	BC070334|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus	0.90607	CTCF.p2:27:0.906
chr5	109776883	109777003	reg1031175.p1	4.948	+	AK314090 TSC_hg19_v1_chr5_+_109025749 BC142656 BC142696	-751184	+	D63998 TSC_hg19_v1_chr5_+_109025627	-751302	+	TSC_hg19_v1_chr5_+_109025138 NM_002372	-751798	+	AK296542 BC042563 BX648527 NM_001039763	285464	-	TSC_hg19_v1_chr5_+_110074720 AK091427	297780	+	TSC_hg19_v1_chr5_+_110074741 AK300123 BC017169 NM_138773 M74089 AK290217 AB529063	297837	+	AK314090|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##BC142656|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##BC142696|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##D63998|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##AK296542|TMEM232|642987|transmembrane protein 232##BC042563|TMEM232|642987|transmembrane protein 232##BX648527|TMEM232|642987|transmembrane protein 232##NM_001039763|TMEM232|642987|transmembrane protein 232##AK091427|SLC25A46|91137|solute carrier family 25, member 46##AK300123|SLC25A46|91137|solute carrier family 25, member 46##BC017169|SLC25A46|91137|solute carrier family 25, member 46##NM_138773|SLC25A46|91137|solute carrier family 25, member 46##M74089|SLC25A46|91137|solute carrier family 25, member 46##AK290217|SLC25A46|91137|solute carrier family 25, member 46	0.964555	CTCF.p2:-6:0.965
chrX	102944022	102944174	reg1030002.p1	4.948	+	TSC_hg19_v1_chrX_-_102942976 AK302083 AK056012 NM_001142419 NM_001142420 NM_001142421 NM_001142422 NM_001142427 NM_001142428 NM_001142431 NM_001142432	-1072	-	BC056899 AF167174 AF100620 D14812 AB050778 TSC_hg19_v1_chrX_-_102941628 AK126115 AK223504 BC093013 NM_001142418 NM_001142423 NM_001142424 NM_001142425 NM_001142426 NM_001142429 NM_001142430 NM_012286	-2435	-	NM_001006639 NM_004780 M99701 BC000809	-60190	+	AK130867 BC029575 NM_182541	21738	+	AK309010 NM_001024452 NM_001172285	39453	-	AK292728 NM_001128834	87337	+	AK302083|MORF4L2|9643|mortality factor 4 like 2##AK056012|MORF4L2|9643|mortality factor 4 like 2##NM_001142419|MORF4L2|9643|mortality factor 4 like 2##NM_001142420|MORF4L2|9643|mortality factor 4 like 2##NM_001142421|MORF4L2|9643|mortality factor 4 like 2##NM_001142422|MORF4L2|9643|mortality factor 4 like 2##NM_001142427|MORF4L2|9643|mortality factor 4 like 2##NM_001142428|MORF4L2|9643|mortality factor 4 like 2##NM_001142431|MORF4L2|9643|mortality factor 4 like 2##NM_001142432|MORF4L2|9643|mortality factor 4 like 2##BC056899|MORF4L2|9643|mortality factor 4 like 2##AF167174|MORF4L2|9643|mortality factor 4 like 2##AF100620|MORF4L2|9643|mortality factor 4 like 2##D14812|MORF4L2|9643|mortality factor 4 like 2##AB050778|MORF4L2|9643|mortality factor 4 like 2##AK126115|MORF4L2|9643|mortality factor 4 like 2##AK223504|MORF4L2|9643|mortality factor 4 like 2##BC093013|MORF4L2|9643|mortality factor 4 like 2##NM_001142418|MORF4L2|9643|mortality factor 4 like 2##NM_001142423|MORF4L2|9643|mortality factor 4 like 2##NM_001142424|MORF4L2|9643|mortality factor 4 like 2##NM_001142425|MORF4L2|9643|mortality factor 4 like 2##NM_001142426|MORF4L2|9643|mortality factor 4 like 2##NM_001142429|MORF4L2|9643|mortality factor 4 like 2##NM_001142430|MORF4L2|9643|mortality factor 4 like 2##NM_012286|MORF4L2|9643|mortality factor 4 like 2##NM_001006639|TCEAL1|9338|transcription elongation factor A (SII)-like 1##NM_004780|TCEAL1|9338|transcription elongation factor A (SII)-like 1##M99701|TCEAL1|9338|transcription elongation factor A (SII)-like 1##BC000809|TCEAL1|9338|transcription elongation factor A (SII)-like 1##AK130867|TMEM31|203562|transmembrane protein 31##BC029575|TMEM31|203562|transmembrane protein 31##NM_182541|TMEM31|203562|transmembrane protein 31##AK309010|GLRA4|441509|glycine receptor, alpha 4##NM_001024452|GLRA4|441509|glycine receptor, alpha 4##NM_001172285|GLRA4|441509|glycine receptor, alpha 4##AK292728|PLP1|5354|proteolipid protein 1##NM_001128834|PLP1|5354|proteolipid protein 1	0.966949	CTCF.p2:-6:0.967
chrX	149119056	149119201	reg1024876.p2	4.948	+	L43575 TSC_hg19_v1_chrX_-_149106661 U66042 NM_001013845	-12446	-	AK313943 NM_001166400 NM_001166401 NM_005364 BC002455 BC012744	-109158	+	AK292272 AK313321 NM_001080790 BC002351 NM_005365	-255533	+	TSC_hg19_v1_chrX_+_149529838 AK302612	410705	+	TSC_hg19_v1_chrX_+_149531583 NM_001177465 AK294478	412434	+	NM_001177466 NM_005491 U46023 BC136324 AB527434 AK315217	494654	+	L43575|CXorf40B|541578|chromosome X open reading frame 40B##U66042|CXorf40B|541578|chromosome X open reading frame 40B##NM_001013845|CXorf40B|541578|chromosome X open reading frame 40B##AK313943|MAGEA8|4107|melanoma antigen family A, 8##NM_001166400|MAGEA8|4107|melanoma antigen family A, 8##NM_001166401|MAGEA8|4107|melanoma antigen family A, 8##NM_005364|MAGEA8|4107|melanoma antigen family A, 8##BC002455|MAGEA8|4107|melanoma antigen family A, 8##BC012744|MAGEA8|4107|melanoma antigen family A, 8##AK292272|MAGEA9|4108|melanoma antigen family A, 9##AK313321|MAGEA9|4108|melanoma antigen family A, 9##NM_001080790|MAGEA9B|728269|melanoma antigen family A, 9B##BC002351|MAGEA9|4108|melanoma antigen family A, 9##NM_005365|MAGEA9|4108|melanoma antigen family A, 9##AK302612|MAMLD1|10046|mastermind-like domain containing 1##NM_001177465|MAMLD1|10046|mastermind-like domain containing 1##AK294478|MAMLD1|10046|mastermind-like domain containing 1##NM_001177466|MAMLD1|10046|mastermind-like domain containing 1##NM_005491|MAMLD1|10046|mastermind-like domain containing 1##U46023|MAMLD1|10046|mastermind-like domain containing 1##BC136324|MAMLD1|10046|mastermind-like domain containing 1##AK315217|MAMLD1|10046|mastermind-like domain containing 1	0.978514	CTCF.p2:0:0.979
chr12	49413904	49413998	reg1027277.p1	4.947	+	TSC_hg19_v1_chr12_-_49412538 AK293332 NM_001206710 AK303276 AK307994 AK310250 BC000358 AK097606 NM_001206709 NM_002733	-1380	-	AB527129 AB018292 BC136398 BC136399 TSC_hg19_v1_chr12_-_49393076 NM_015086 BC039264	-20951	-	NM_005430	-41716	+	AF010403 NM_003482	35155	-	BC014155 BC027482 NM_144593 AK098663 AY509932 AY327412	49817	-	AK313360 BC033507 HQ607677 HQ607678 NM_021044	74634	-	AK293332|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206710|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK303276|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK307994|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK310250|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##BC000358|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK097606|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206709|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_002733|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AB018292|DDN|23109|dendrin##BC136398|DDN|23109|dendrin##BC136399|DDN|23109|dendrin##NM_015086|DDN|23109|dendrin##BC039264|DDN|23109|dendrin##NM_005430|WNT1|7471|wingless-type MMTV integration site family, member 1##AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##BC014155|RHEBL1|121268|Ras homolog enriched in brain like 1##BC027482|RHEBL1|121268|Ras homolog enriched in brain like 1##NM_144593|RHEBL1|121268|Ras homolog enriched in brain like 1##AK098663|RHEBL1|121268|Ras homolog enriched in brain like 1##AY509932|RHEBL1|121268|Ras homolog enriched in brain like 1##AY327412|RHEBL1|121268|Ras homolog enriched in brain like 1##AK313360|DHH|50846|desert hedgehog##BC033507|DHH|50846|desert hedgehog##HQ607677|DHH|50846|desert hedgehog##HQ607678|DHH|50846|desert hedgehog##NM_021044|DHH|50846|desert hedgehog	0.112367	
chr20	25277376	25277502	reg1018416.p1	4.947	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	-48681	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	-100959	+	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	-101069	+	CU680756 AK075023 AK290815 AK293495 TSC_hg19_v1_chr20_-_25371426	93946	-	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	94087	-	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	110883	+	NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK075023|ABHD12|26090|abhydrolase domain containing 12##AK290815|ABHD12|26090|abhydrolase domain containing 12##AK293495|ABHD12|26090|abhydrolase domain containing 12##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	0.876466	CTCF.p2:15:0.876
chr2	230933632	230933771	reg1029617.p2	4.947	+	BC065524 BC034382 AK055356 TSC_hg19_v1_chr2_-_230933641 NM_152527	-35	-	TSC_hg19_v1_chr2_+_230787218 BC017869 BC022538 NM_174899 BC033935 AK289655 AK309702	-146484	+	TSC_hg19_v1_chr2_-_230786712 AK310971	-146952	-	AL832300 BC012447 AK026488 AF280094 AF280095 BC019059 NM_004509 NM_004510 NM_080424 TSC_hg19_v1_chr2_-_231084830	151014	-	AK301097 NM_001185015	156742	-	AK301317 AK301267 NM_001005176 NM_007237 U36499 U36500 U63420 BC105744 BC105960 BC105743 BC054890 BC070160 BC038091	156762	+	BC065524|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##BC034382|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##AK055356|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##NM_152527|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##BC017869|FBXO36|130888|F-box protein 36##BC022538|FBXO36|130888|F-box protein 36##NM_174899|FBXO36|130888|F-box protein 36##BC033935|FBXO36|130888|F-box protein 36##AK289655|FBXO36|130888|F-box protein 36##AK309702|FBXO36|130888|F-box protein 36##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12##AL832300|SP110|3431|SP110 nuclear body protein##BC012447|SP110|3431|SP110 nuclear body protein##AK026488|SP110|3431|SP110 nuclear body protein##AF280094|SP110|3431|SP110 nuclear body protein##AF280095|SP110|3431|SP110 nuclear body protein##BC019059|SP110|3431|SP110 nuclear body protein##NM_004509|SP110|3431|SP110 nuclear body protein##NM_004510|SP110|3431|SP110 nuclear body protein##NM_080424|SP110|3431|SP110 nuclear body protein##AK301097|SP110|3431|SP110 nuclear body protein##NM_001185015|SP110|3431|SP110 nuclear body protein##AK301317|SP140|11262|SP140 nuclear body protein##AK301267|SP140|11262|SP140 nuclear body protein##NM_001005176|SP140|11262|SP140 nuclear body protein##NM_007237|SP140|11262|SP140 nuclear body protein##U36499|SP140|11262|SP140 nuclear body protein##U36500|SP140|11262|SP140 nuclear body protein##U63420|SP140|11262|SP140 nuclear body protein##BC105744|SP140|11262|SP140 nuclear body protein##BC105960|SP140|11262|SP140 nuclear body protein##BC105743|SP140|11262|SP140 nuclear body protein##BC054890|SP140|11262|SP140 nuclear body protein##BC070160|SP140|11262|SP140 nuclear body protein##BC038091|SP140|11262|SP140 nuclear body protein	0.0	
chr3	169380044	169380199	reg1027078.p1	4.947	+	BX640908 NM_001164000	-514600	-	TSC_hg19_v1_chr3_-_168864325 AK292865 AF487422 NM_001105078	-515759	-	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	-516042	-	BC069498 GQ352634 U43292 AK304098 NM_001205194 NM_004991	1368	-	BC128029 TSC_hg19_v1_chr3_-_169482848	102727	-	BC007289 AK055346 NM_032487	107521	-	BX640908|MECOM|2122|MDS1 and EVI1 complex locus##NM_001164000|MECOM|2122|MDS1 and EVI1 complex locus##AK292865|MECOM|2122|MDS1 and EVI1 complex locus##AF487422|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105078|MECOM|2122|MDS1 and EVI1 complex locus##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus##BC069498|MECOM|2122|MDS1 and EVI1 complex locus##GQ352634|MECOM|2122|MDS1 and EVI1 complex locus##U43292|MECOM|2122|MDS1 and EVI1 complex locus##AK304098|MECOM|2122|MDS1 and EVI1 complex locus##NM_001205194|MECOM|2122|MDS1 and EVI1 complex locus##NM_004991|MECOM|2122|MDS1 and EVI1 complex locus##BC128029|TERC|7012|telomerase RNA component##BC007289|ARPM1|84517|actin related protein M1##AK055346|ARPM1|84517|actin related protein M1##NM_032487|ARPM1|84517|actin related protein M1	0.142475	
chr3	40555363	40555495	reg1023300.p1	4.947	+	AK131232 AX721156 NM_175888 AK093599 AX748220 TSC_hg19_v1_chr3_+_40547598	-7845	+	TSC_hg19_v1_chr3_+_40518612 NM_001145082 NM_001145093 AK304139 NM_001145083 AK075245 AK304793 AK304741	-36786	+	TSC_hg19_v1_chr3_+_40498829 NM_003973 BC000606 BC009294 AB055765 AK290674 BC071913 AK222750 AK292045 AK223111 AK300873 BC016379 NM_001034996 BC029036	-56618	+	TSC_hg19_v1_chr3_+_40566380 AK127181 NM_001098414 NM_198484 AX721066 AK074366	10973	+	TSC_hg19_v1_chr3_+_40566471 BC101619 BC113415 CR749268	11071	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	685520	+	AK131232|ZNF620|253639|zinc finger protein 620##NM_175888|ZNF620|253639|zinc finger protein 620##AK093599|ZNF620|253639|zinc finger protein 620##NM_001145082|ZNF619|285267|zinc finger protein 619##NM_001145093|ZNF619|285267|zinc finger protein 619##AK304139|ZNF619|285267|zinc finger protein 619##NM_001145083|ZNF619|285267|zinc finger protein 619##AK075245|ZNF619|285267|zinc finger protein 619##AK304793|ZNF619|285267|zinc finger protein 619##AK304741|ZNF619|285267|zinc finger protein 619##NM_003973|RPL14|9045|ribosomal protein L14##BC000606|RPL14|9045|ribosomal protein L14##BC009294|RPL14|9045|ribosomal protein L14##AK290674|RPL14|9045|ribosomal protein L14##BC071913|RPL14|9045|ribosomal protein L14##AK222750|RPL14|9045|ribosomal protein L14##AK292045|RPL14|9045|ribosomal protein L14##AK223111|RPL14|9045|ribosomal protein L14##BC016379|RPL14|9045|ribosomal protein L14##NM_001034996|RPL14|9045|ribosomal protein L14##BC029036|RPL14|9045|ribosomal protein L14##AK127181|ZNF621|285268|zinc finger protein 621##NM_001098414|ZNF621|285268|zinc finger protein 621##NM_198484|ZNF621|285268|zinc finger protein 621##AK074366|ZNF621|285268|zinc finger protein 621##BC101619|ZNF621|285268|zinc finger protein 621##BC113415|ZNF621|285268|zinc finger protein 621##CR749268|ZNF621|285268|zinc finger protein 621##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa	0.830069	CTCF.p2:-16:0.830
chr4	120480358	120480479	reg1028297.p1	4.947	+	TSC_hg19_v1_chr4_-_120375778 BC070391	-104640	-	CU686944 AK025079 BC069617 BC069466 BC069625 BC069637 BC111791 NM_000134	-237132	-	AY605045 NM_001170330	-254819	-	AM392687 AM392735 AM392945 AM393171 AM393311 AM393426 AM393432 AM393814 AY264918 AB015656 NM_033430 AF155193 TSC_hg19_v1_chr4_-_120548474	67987	-	TSC_hg19_v1_chr4_-_120549121 AF155194 NM_033437	68758	-	AB527373 AM393036 AM393270 AM393448 AK290189 BC126233 AJ004865 AF155192 TSC_hg19_v1_chr4_-_120549960 AF043731 NM_001083	69485	-	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal##BC069617|FABP2|2169|fatty acid binding protein 2, intestinal##BC069466|FABP2|2169|fatty acid binding protein 2, intestinal##BC069625|FABP2|2169|fatty acid binding protein 2, intestinal##BC069637|FABP2|2169|fatty acid binding protein 2, intestinal##BC111791|FABP2|2169|fatty acid binding protein 2, intestinal##NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal##AY605045|C4orf3|401152|chromosome 4 open reading frame 3##NM_001170330|C4orf3|401152|chromosome 4 open reading frame 3##AM392687|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM392735|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM392945|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393171|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393311|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393426|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393432|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393814|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AY264918|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AB015656|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033430|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155193|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	0.987009	CTCF.p2:-27:0.987
chr6	105237878	105237996	reg1024300.p1	4.947	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	-3391032	+	BC037954 TSC_hg19_v1_chr6_+_101846686	-3391260	+	HM149340 TSC_hg19_v1_chr6_+_101841583	-3396431	+	TSC_hg19_v1_chr6_-_105307736 AK291760	69788	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	69825	-	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	69851	-	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	0.956036	CTCF.p2:-7:0.956
chr16	14622934	14623067	reg1001435.p1	4.946	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-328802	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-342482	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-457914	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	101028	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	101133	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	103739	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.0	
chr16	30103329	30103484	reg1021644.p1	4.946	+	BC026031 NM_004608 AK022330 TSC_hg19_v1_chr16_-_30103243	-159	-	TSC_hg19_v1_chr16_+_30087347 X70218 BC001416 AF097996 NM_002720	-16038	+	TSC_hg19_v1_chr16_+_30077158 BC012880 BC015888 AK301993	-26243	+	BC005009 TSC_hg19_v1_chr16_-_30107535 BC050664 NM_031477 AB098737 NM_001145524 AF305622 AK022409	4139	-	TSC_hg19_v1_chr16_+_30107748 AK095480 BC048809	4362	+	AK097453 TSC_hg19_v1_chr16_+_30108408	4997	+	BC026031|TBX6|6911|T-box 6##NM_004608|TBX6|6911|T-box 6##AK022330|TBX6|6911|T-box 6##X70218|PPP4C|5531|protein phosphatase 4, catalytic subunit##BC001416|PPP4C|5531|protein phosphatase 4, catalytic subunit##AF097996|PPP4C|5531|protein phosphatase 4, catalytic subunit##NM_002720|PPP4C|5531|protein phosphatase 4, catalytic subunit##BC012880|ALDOA|226|aldolase A, fructose-bisphosphate##BC015888|ALDOA|226|aldolase A, fructose-bisphosphate##AK301993|ALDOA|226|aldolase A, fructose-bisphosphate##BC005009|YPEL3|83719|yippee-like 3 (Drosophila)##BC050664|YPEL3|83719|yippee-like 3 (Drosophila)##NM_031477|YPEL3|83719|yippee-like 3 (Drosophila)##AB098737|YPEL3|83719|yippee-like 3 (Drosophila)##NM_001145524|YPEL3|83719|yippee-like 3 (Drosophila)##AF305622|YPEL3|83719|yippee-like 3 (Drosophila)##AK022409|YPEL3|83719|yippee-like 3 (Drosophila)	0.183878	
chr17	47031726	47031844	reg1029113.p1	4.946	+	AB464229 CU679209 CU691602 TSC_hg19_v1_chr17_-_47022173 AF156102 BC008976 NM_007241 BC038830	-9649	-	TSC_hg19_v1_chr17_+_46986002 BC015890 EF623992	-45813	+	AK130303 TSC_hg19_v1_chr17_+_46985840 AK024030 AK122770	-45951	+	BC096146 BC096147 BC096148 BC096149 BC069100 BC069663 BC069686 BC069746 M18185 NM_004123	14168	-	TSC_hg19_v1_chr17_+_47074830 NM_001160423 NM_006546 AF198254 AK313229	43045	+	AK302876 NM_001159388	178036	+	AF156102|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##BC008976|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##NM_007241|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##BC038830|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##BC015890|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##EF623992|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK130303|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK024030|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK122770|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##BC096146|GIP|2695|gastric inhibitory polypeptide##BC096147|GIP|2695|gastric inhibitory polypeptide##BC096148|GIP|2695|gastric inhibitory polypeptide##BC096149|GIP|2695|gastric inhibitory polypeptide##BC069100|GIP|2695|gastric inhibitory polypeptide##BC069663|GIP|2695|gastric inhibitory polypeptide##BC069686|GIP|2695|gastric inhibitory polypeptide##BC069746|GIP|2695|gastric inhibitory polypeptide##M18185|GIP|2695|gastric inhibitory polypeptide##NM_004123|GIP|2695|gastric inhibitory polypeptide##NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##AK302876|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159388|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2	0.026967	
chr22	50964786	50964967	reg1026581.p1	4.946	+	NM_001169110	-303	-	BC102024 BC102025 AL021683 TSC_hg19_v1_chr22_-_50964031 NM_001169111 NM_005138	-870	-	TSC_hg19_v1_chr22_+_50946654 BC000473 BC001509 BC001833 BC001298 AL021682 BC001937 BC009441 CR456604 AB527191 CU013085 CU013373	-18167	+	TSC_hg19_v1_chr22_-_50964861 NM_001169109	3	-	DQ891456 DQ894634 TSC_hg19_v1_chr22_-_50968202 M63193 NM_001113756	3321	-	TSC_hg19_v1_chr22_-_50968442 BC018160 BC052211 AK057214 AK298691 AK301194 AK314716 AK225269	3565	-	NM_001169110|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##BC102024|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##BC102025|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##AL021683|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##NM_001169111|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##NM_005138|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##BC000473|NCAPH2|29781|non-SMC condensin II complex, subunit H2##BC001509|NCAPH2|29781|non-SMC condensin II complex, subunit H2##BC001833|NCAPH2|29781|non-SMC condensin II complex, subunit H2##BC001298|NCAPH2|29781|non-SMC condensin II complex, subunit H2##AL021682|NCAPH2|29781|non-SMC condensin II complex, subunit H2##BC001937|NCAPH2|29781|non-SMC condensin II complex, subunit H2##BC009441|NCAPH2|29781|non-SMC condensin II complex, subunit H2##CR456604|NCAPH2|29781|non-SMC condensin II complex, subunit H2##NM_001169109|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##DQ891456|TYMP|1890|thymidine phosphorylase##DQ894634|TYMP|1890|thymidine phosphorylase##M63193|TYMP|1890|thymidine phosphorylase##NM_001113756|TYMP|1890|thymidine phosphorylase##BC018160|TYMP|1890|thymidine phosphorylase##BC052211|TYMP|1890|thymidine phosphorylase##AK057214|TYMP|1890|thymidine phosphorylase##AK298691|TYMP|1890|thymidine phosphorylase##AK301194|TYMP|1890|thymidine phosphorylase##AK314716|TYMP|1890|thymidine phosphorylase##AK225269|TYMP|1890|thymidine phosphorylase	0.832506	CTCF.p2:30:0.833
chr5	13988276	13988456	reg1002719.p2	4.946	+	AX800026 AY045575 NM_001369	-43778	-	TSC_hg19_v1_chr5_-_11904184 AK296232	-2084182	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	-2084330	-	AY050643 TSC_hg19_v1_chr5_-_14011873	23504	-	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	155306	+	TSC_hg19_v1_chr5_+_14488527 AK131423	500173	+	AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)	0.0	
chr5	143337167	143337266	reg1030201.p2	4.946	+	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	-145458	+	NM_001018074 NM_001018075 NM_001018077	-522140	-	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-553050	-	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	212919	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	212960	-	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	213030	-	AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5	0.0	
chr7	17166421	17166540	reg1027420.p1	4.946	+	AY359065 BC058284 NM_176813	-244876	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-321809	-	TSC_hg19_v1_chr7_+_16793401 AK093487 NM_014399 AK026587 AK075475 AK316595 AY358995 AF100759 BC033863 AF120265 DQ892059 DQ895252 CR542107	-373024	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	171789	+	TSC_hg19_v1_chr7_+_17382906 BC021696	216426	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	813569	-	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK093487|TSPAN13|27075|tetraspanin 13##NM_014399|TSPAN13|27075|tetraspanin 13##AK026587|TSPAN13|27075|tetraspanin 13##AK075475|TSPAN13|27075|tetraspanin 13##AK316595|TSPAN13|27075|tetraspanin 13##AY358995|TSPAN13|27075|tetraspanin 13##AF100759|TSPAN13|27075|tetraspanin 13##BC033863|TSPAN13|27075|tetraspanin 13##AF120265|TSPAN13|27075|tetraspanin 13##DQ892059|TSPAN13|27075|tetraspanin 13##DQ895252|TSPAN13|27075|tetraspanin 13##CR542107|TSPAN13|27075|tetraspanin 13##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13	0.0	
chr13	20701958	20702086	reg1025767.p1	4.945	+	TSC_hg19_v1_chr13_+_20532911 AJ224901 BX647944 NM_001190965	-169057	+	TSC_hg19_v1_chr13_+_20532881 AK226118 AK289741	-169138	+	TSC_hg19_v1_chr13_+_20532834 BC036372 NM_003453 NM_197968 AL136621 NM_001190964 Y13472	-169205	+	NM_021954	33160	-	BC017048 BC071703 TSC_hg19_v1_chr13_-_20767078 AK225966	65036	-	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	65089	-	AJ224901|ZMYM2|7750|zinc finger, MYM-type 2##BX647944|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190965|ZMYM2|7750|zinc finger, MYM-type 2##AK226118|ZMYM2|7750|zinc finger, MYM-type 2##AK289741|ZMYM2|7750|zinc finger, MYM-type 2##BC036372|ZMYM2|7750|zinc finger, MYM-type 2##NM_003453|ZMYM2|7750|zinc finger, MYM-type 2##NM_197968|ZMYM2|7750|zinc finger, MYM-type 2##AL136621|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190964|ZMYM2|7750|zinc finger, MYM-type 2##Y13472|ZMYM2|7750|zinc finger, MYM-type 2##NM_021954|GJA3|2700|gap junction protein, alpha 3, 46kDa##BC017048|GJB2|2706|gap junction protein, beta 2, 26kDa##BC071703|GJB2|2706|gap junction protein, beta 2, 26kDa##AK225966|GJB2|2706|gap junction protein, beta 2, 26kDa##AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa	0.882516	CTCF.p2:21:0.883
chr19	45550890	45550982	reg1024557.p2	4.945	+	TSC_hg19_v1_chr19_+_45542313 AF042800 NM_007056 AK293333 AY358944 BC013178	-8613	+	TSC_hg19_v1_chr19_+_45504729 M83221 NM_006509 BC028013 AK290594	-46194	+	TSC_hg19_v1_chr19_+_45458649 BC012359 BT007262 CU680306 DQ892236 DQ895436	-92282	+	BC019352 NM_145288	28751	-	TSC_hg19_v1_chr19_+_45582529 NM_001007270 NM_001007269 NM_024707 AK024018 BC007793	31577	+	TSC_hg19_v1_chr19_+_45596205 BC035704	45279	+	AF042800|CLASRP|11129|CLK4-associating serine/arginine rich protein##NM_007056|CLASRP|11129|CLK4-associating serine/arginine rich protein##AK293333|CLASRP|11129|CLK4-associating serine/arginine rich protein##AY358944|CLASRP|11129|CLK4-associating serine/arginine rich protein##BC013178|CLASRP|11129|CLK4-associating serine/arginine rich protein##M83221|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##NM_006509|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##BC028013|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##AK290594|RELB|5971|v-rel reticuloendotheliosis viral oncogene homolog B##BC012359|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##BT007262|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##DQ892236|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##DQ895436|CLPTM1|1209|cleft lip and palate associated transmembrane protein 1##BC019352|ZNF296|162979|zinc finger protein 296##NM_145288|ZNF296|162979|zinc finger protein 296##NM_001007270|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_001007269|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_024707|GEMIN7|79760|gem (nuclear organelle) associated protein 7##AK024018|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC007793|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC035704|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37	0.0	
chr2	228276179	228276360	reg1027405.p2	4.945	+	AY358671 BC137256 BC137257 BC035754 TSC_hg19_v1_chr2_-_228244023 AK026453 NM_024795	-32255	-	AF246239 NM_020194	-84042	+	TSC_hg19_v1_chr2_+_228189983 AK026137 BC093024 AF258660	-86225	+	TSC_hg19_v1_chr2_+_228336861 AK097451	60573	+	TSC_hg19_v1_chr2_+_228336877 NM_001135187 NM_001135188 NM_001135189 NM_004504 BC030592 X89478 BC096272 BC096273 BC096274 BC096275 AB527534 CU688928	60737	+	TSC_hg19_v1_chr2_+_228356287 AK295030	80022	+	AY358671|TM4SF20|79853|transmembrane 4 L six family member 20##BC137256|TM4SF20|79853|transmembrane 4 L six family member 20##BC137257|TM4SF20|79853|transmembrane 4 L six family member 20##BC035754|TM4SF20|79853|transmembrane 4 L six family member 20##AK026453|TM4SF20|79853|transmembrane 4 L six family member 20##NM_024795|TM4SF20|79853|transmembrane 4 L six family member 20##AF246239|MFF|56947|mitochondrial fission factor##NM_020194|MFF|56947|mitochondrial fission factor##AK026137|MFF|56947|mitochondrial fission factor##BC093024|MFF|56947|mitochondrial fission factor##AF258660|MFF|56947|mitochondrial fission factor##AK097451|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135187|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135188|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135189|AGFG1|3267|ArfGAP with FG repeats 1##NM_004504|AGFG1|3267|ArfGAP with FG repeats 1##BC030592|AGFG1|3267|ArfGAP with FG repeats 1##X89478|AGFG1|3267|ArfGAP with FG repeats 1##BC096272|AGFG1|3267|ArfGAP with FG repeats 1##BC096273|AGFG1|3267|ArfGAP with FG repeats 1##BC096274|AGFG1|3267|ArfGAP with FG repeats 1##BC096275|AGFG1|3267|ArfGAP with FG repeats 1##AK295030|AGFG1|3267|ArfGAP with FG repeats 1	0.0	
chr2	27304077	27304251	reg1025570.p1	4.945	+	TSC_hg19_v1_chr2_+_27301693 BC007530 BC017284 BC136279 AF088916 AL050138	-2313	+	NM_007046 BC142638 AK075517 AK307539 BC090957 BC142688 TSC_hg19_v1_chr2_+_27301565	-2663	+	TSC_hg19_v1_chr2_-_27294519 AL049447 BC105283 NM_001134693	-9631	-	NM_000221 NM_006488 TSC_hg19_v1_chr2_+_27309615 BC006233	5492	+	TSC_hg19_v1_chr2_+_27310090 BX648873 AK130033 AK223075 X78678 AB528158 AM393286 CR456801	5939	+	AK302185 NM_001166241	29802	-	BC007530|EMILIN1|11117|elastin microfibril interfacer 1##BC017284|EMILIN1|11117|elastin microfibril interfacer 1##BC136279|EMILIN1|11117|elastin microfibril interfacer 1##AF088916|EMILIN1|11117|elastin microfibril interfacer 1##AL050138|EMILIN1|11117|elastin microfibril interfacer 1##NM_007046|EMILIN1|11117|elastin microfibril interfacer 1##BC142638|EMILIN1|11117|elastin microfibril interfacer 1##AK075517|EMILIN1|11117|elastin microfibril interfacer 1##AK307539|EMILIN1|11117|elastin microfibril interfacer 1##BC090957|EMILIN1|11117|elastin microfibril interfacer 1##BC142688|EMILIN1|11117|elastin microfibril interfacer 1##AL049447|OST4|100128731|oligosaccharyltransferase 4 homolog (S. cerevisiae)##BC105283|OST4|100128731|oligosaccharyltransferase 4 homolog (S. cerevisiae)##NM_001134693|OST4|100128731|oligosaccharyltransferase 4 homolog (S. cerevisiae)##NM_000221|KHK|3795|ketohexokinase (fructokinase)##NM_006488|KHK|3795|ketohexokinase (fructokinase)##BC006233|KHK|3795|ketohexokinase (fructokinase)##BX648873|KHK|3795|ketohexokinase (fructokinase)##AK130033|KHK|3795|ketohexokinase (fructokinase)##AK223075|KHK|3795|ketohexokinase (fructokinase)##X78678|KHK|3795|ketohexokinase (fructokinase)##AM393286|KHK|3795|ketohexokinase (fructokinase)##CR456801|KHK|3795|ketohexokinase (fructokinase)##AK302185|CGREF1|10669|cell growth regulator with EF-hand domain 1##NM_001166241|CGREF1|10669|cell growth regulator with EF-hand domain 1	0.031405	
chr4	140933874	140934022	reg1031720.p1	4.945	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	-346814	+	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	-346958	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-456515	-	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	140390	-	NM_018717 TSC_hg19_v1_chr4_-_141075339	141384	-	AK027797 NM_032547	244491	+	AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)##NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)##AK027797|SCOC|60592|short coiled-coil protein##NM_032547|SCOC|60592|short coiled-coil protein	0.023205	
chr7	20259701	20259853	reg1024949.p1	4.945	+	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	-2797	-	BX648384 NM_152774	-447374	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	-511131	-	AK295044 TSC_hg19_v1_chr7_+_20370337	110560	+	BC002630 NM_002214 M73780	110957	+	AB353947 NM_001163941 AY230001	395520	+	BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##AK295044|ITGB8|3696|integrin, beta 8##BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8##AB353947|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163941|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY230001|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	0.0	
chr8	71025993	71026093	reg1027349.p1	4.945	+	TSC_hg19_v1_chr8_-_70983549 AF319458 AK022595 NM_024504	-42488	-	TSC_hg19_v1_chr8_-_70983468 BC052311	-42572	-	AK308488 AF205075 AK096879 NM_030958	-278794	-	BC092442 TSC_hg19_v1_chr8_-_71315599	289504	-	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	289983	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	494479	-	AF319458|PRDM14|63978|PR domain containing 14##AK022595|PRDM14|63978|PR domain containing 14##NM_024504|PRDM14|63978|PR domain containing 14##BC052311|PRDM14|63978|PR domain containing 14##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC092442|NCOA2|10499|nuclear receptor coactivator 2##NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1	0.053821	
chr1	236288436	236288523	reg1027756.p2	4.944	+	TSC_hg19_v1_chr1_-_236228670 BC012501	-59739	-	TSC_hg19_v1_chr1_-_236228496 AK297234	-59981	-	TSC_hg19_v1_chr1_-_236228477 NM_002508	-60001	-	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	17397	+	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	156709	-	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	156837	-	BC012501|NID1|4811|nidogen 1##AK297234|NID1|4811|nidogen 1##NM_002508|NID1|4811|nidogen 1##BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)	0.07889	
chr16	762969	763103	reg1027050.p2	4.944	+	TSC_hg19_v1_chr16_-_755827 BC036680 NM_153350	-7221	-	AL136863 NM_032259 AK301146	-22634	-	TSC_hg19_v1_chr16_-_734358 BC137100 BC137101 NM_001005920	-28639	-	TSC_hg19_v1_chr16_+_765128 BC000662 NM_024042	2089	+	TSC_hg19_v1_chr16_+_771145 BC001181 NM_023933 BC002624	8127	+	AY439221 BC027941 BC031561 AK298111 AK127495 AK128575 AK303991 AK091831 AK128538 AX747208 BC042110 NM_001031737	13383	-	BC036680|FBXL16|146330|F-box and leucine-rich repeat protein 16##NM_153350|FBXL16|146330|F-box and leucine-rich repeat protein 16##AL136863|WDR24|84219|WD repeat domain 24##NM_032259|WDR24|84219|WD repeat domain 24##AK301146|WDR24|84219|WD repeat domain 24##BC137100|JMJD8|339123|jumonji domain containing 8##BC137101|JMJD8|339123|jumonji domain containing 8##NM_001005920|JMJD8|339123|jumonji domain containing 8##BC000662|METRN|79006|meteorin, glial cell differentiation regulator##NM_024042|METRN|79006|meteorin, glial cell differentiation regulator##BC001181|FAM173A|65990|family with sequence similarity 173, member A##NM_023933|FAM173A|65990|family with sequence similarity 173, member A##BC002624|FAM173A|65990|family with sequence similarity 173, member A##AY439221|CCDC78|124093|coiled-coil domain containing 78##BC027941|CCDC78|124093|coiled-coil domain containing 78##BC031561|CCDC78|124093|coiled-coil domain containing 78##AK298111|CCDC78|124093|coiled-coil domain containing 78##AK127495|CCDC78|124093|coiled-coil domain containing 78##AK128575|CCDC78|124093|coiled-coil domain containing 78##AK303991|CCDC78|124093|coiled-coil domain containing 78##AK091831|CCDC78|124093|coiled-coil domain containing 78##AK128538|CCDC78|124093|coiled-coil domain containing 78##BC042110|CCDC78|124093|coiled-coil domain containing 78##NM_001031737|CCDC78|124093|coiled-coil domain containing 78	0.891292	CTCF.p2:5:0.891
chr2	120981274	120981432	reg1030484.p1	4.944	+	TSC_hg19_v1_chr2_-_120980977 AF530474 NM_024121	-355	-	TSC_hg19_v1_chr2_-_120980957 BC016849 AK289880 BC080607 AK024632	-416	-	TSC_hg19_v1_chr2_+_120770652 AK023019 BC054508 AK290895 BC032822 NM_001184938	-210620	+	NM_002881 TSC_hg19_v1_chr2_+_121010418	29067	+	AK127675 AK304588 TSC_hg19_v1_chr2_+_121010450 M35416	29091	+	TSC_hg19_v1_chr2_+_121010498 BC018163	29151	+	AF530474|TMEM185B|79134|transmembrane protein 185B##NM_024121|TMEM185B|79134|transmembrane protein 185B##BC016849|TMEM185B|79134|transmembrane protein 185B##BC080607|TMEM185B|79134|transmembrane protein 185B##AK024632|TMEM185B|79134|transmembrane protein 185B##AK023019|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC054508|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK290895|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC032822|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184938|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_002881|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK127675|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK304588|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##M35416|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)	0.0	
chr21	44597023	44597162	reg1002503.p2	4.944	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-7918	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-69408	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-69467	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	248897	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	249903	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	482270	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.055412	
chr6	28367538	28367656	reg1029504.p1	4.944	+	TSC_hg19_v1_chr6_-_28367519 BC041661 AB007886 NM_001163391	-76	-	TSC_hg19_v1_chr6_+_28317723 AK091225 AX746861 NM_001242894 NM_001242895 NM_024493 AK122790 AK313532 BC006118	-49871	+	NM_001243241 NM_001243242 NM_001243244 NM_030899	-63446	-	AK309235 AL833347 AK092117 AX747363 NM_001012455	43656	-	BC133691 BC148315 AY324826 NM_182701	115969	-	AJ005277 BC128159 BC128160 NM_001509 NM_003996 AB463692	126191	+	BC041661|ZSCAN12|9753|zinc finger and SCAN domain containing 12##AB007886|ZSCAN12|9753|zinc finger and SCAN domain containing 12##NM_001163391|ZSCAN12|9753|zinc finger and SCAN domain containing 12##AK091225|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001242894|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001242895|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_024493|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##AK122790|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##AK313532|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##BC006118|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001243241|ZNF323|64288|zinc finger protein 323##NM_001243242|ZNF323|64288|zinc finger protein 323##NM_001243244|ZNF323|64288|zinc finger protein 323##NM_030899|ZNF323|64288|zinc finger protein 323##AK309235|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AL833347|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AK092117|ZSCAN23|222696|zinc finger and SCAN domain containing 23##NM_001012455|ZSCAN23|222696|zinc finger and SCAN domain containing 23##BC133691|GPX6|257202|glutathione peroxidase 6 (olfactory)##BC148315|GPX6|257202|glutathione peroxidase 6 (olfactory)##AY324826|GPX6|257202|glutathione peroxidase 6 (olfactory)##NM_182701|GPX6|257202|glutathione peroxidase 6 (olfactory)##AJ005277|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC128159|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC128160|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##NM_001509|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##NM_003996|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)	0.0	
chr1	144615140	144615280	reg1029528.p1	4.943	+	AY894562 AY894567 AY894568 AY894572 AY894574 NM_001037675	-252	+	TSC_hg19_v1_chr1_+_144593695 BX538005 AK308678	-21512	+	TSC_hg19_v1_chr1_-_144521169 AK090660 AX746564	-93981	-	CU687328 TSC_hg19_v1_chr1_-_144931874 BC078660	316601	-	BC132717 TSC_hg19_v1_chr1_-_144932057 BC004860 NM_001002811	316837	-	AL832024 AB042556 AL831815 TSC_hg19_v1_chr1_-_144994880	379651	-	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894567|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894568|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894572|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894574|NBPF9|400818|neuroblastoma breakpoint family, member 9##NM_001037675|NBPF9|400818|neuroblastoma breakpoint family, member 9##BX538005|NBPF10|100132406|neuroblastoma breakpoint family, member 10##AK090660|FAM91A2|57234|family with sequence similarity 91, member A2##BC078660|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC132717|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC004860|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_001002811|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AL832024|PDE4DIP|9659|phosphodiesterase 4D interacting protein##AL831815|PDE4DIP|9659|phosphodiesterase 4D interacting protein	0.389166	CTCF.p2:0:0.389
chr1	19253288	19253412	reg1027741.p1	4.943	+	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-24196	-	AK294552 NM_001161504	-35966	-	NM_152232 AB527225	-67195	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	29449	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	283396	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	324642	-	DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##NM_001136265|IFFO2|126917|intermediate filament family orphan 2##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090	0.0	
chr15	93168840	93168991	reg1026259.p1	4.943	+	AK057393 NM_153040	-154009	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	-231716	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-771348	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	29964	-	BC110328 TSC_hg19_v1_chr15_-_93277463	108474	-	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	274571	+	AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##BC110328|FAM174B|400451|family with sequence similarity 174, member B##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2	0.0	
chr18	60383465	60383593	reg1028068.p1	4.943	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	-865	+	NM_017742 TSC_hg19_v1_chr18_+_60190696 BC006340	-192775	+	AB209762 AF018253 NM_003839 AB527346	-390979	+	TSC_hg19_v1_chr18_+_60383911 AB011178	397	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	779	+	TSC_hg19_v1_chr18_-_60795898 AF401211	412406	-	NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##NM_017742|ZCCHC2|54877|zinc finger, CCHC domain containing 2##BC006340|ZCCHC2|54877|zinc finger, CCHC domain containing 2##AB209762|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##AF018253|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_003839|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AF401211|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr2	175641064	175641194	reg1026423.p1	4.943	+	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	-11960	-	TSC_hg19_v1_chr2_+_175584527 DQ895855	-56551	+	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	-93375	-	AK055060 NM_001206602	71181	-	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	228884	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	391766	-	AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##DQ895855|H3F3A|3020|H3 histone, family 3A##BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2	0.073247	
chr4	55812146	55812259	reg1026832.p1	4.943	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	-288068	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-716738	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-716922	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	179552	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	400214	+	TSC_hg19_v1_chr4_+_56212475 CU677982 CR457312	400282	+	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3##CR457312|SRD5A3|79644|steroid 5 alpha-reductase 3	0.0	
chr5	109026842	109026980	reg1027184.p1	4.943	+	AK314090 TSC_hg19_v1_chr5_+_109025749 BC142656 BC142696	-1152	+	D63998 TSC_hg19_v1_chr5_+_109025627	-1270	+	TSC_hg19_v1_chr5_+_109025138 NM_002372	-1766	+	AK296542 BC042563 BX648527 NM_001039763	1035496	-	TSC_hg19_v1_chr5_+_110074720 AK091427	1047812	+	TSC_hg19_v1_chr5_+_110074741 AK300123 BC017169 NM_138773 M74089 AK290217 AB529063	1047869	+	AK314090|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##BC142656|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##BC142696|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##D63998|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##AK296542|TMEM232|642987|transmembrane protein 232##BC042563|TMEM232|642987|transmembrane protein 232##BX648527|TMEM232|642987|transmembrane protein 232##NM_001039763|TMEM232|642987|transmembrane protein 232##AK091427|SLC25A46|91137|solute carrier family 25, member 46##AK300123|SLC25A46|91137|solute carrier family 25, member 46##BC017169|SLC25A46|91137|solute carrier family 25, member 46##NM_138773|SLC25A46|91137|solute carrier family 25, member 46##M74089|SLC25A46|91137|solute carrier family 25, member 46##AK290217|SLC25A46|91137|solute carrier family 25, member 46	0.0	
chr5	138729945	138730049	reg1028209.p2	4.943	+	GQ477350 DQ892627 EU176703 AK057549 AK292706 BC009931 BC021275 AF151024 NM_016459	-4423	-	TSC_hg19_v1_chr5_-_138719021 NM_005847 NM_152685	-10969	-	AF058317 AJ269477 CU676390 AK290789 AF170911 BC050261 TSC_hg19_v1_chr5_-_138718995 AK300935 AF098277 AK298337 AJ250807 BC019225	-11026	-	NM_001161546	887	-	BC040037 BC050563 NM_194296 AK098740	9768	-	BC030162 TSC_hg19_v1_chr5_-_138775145 AK024054	45154	-	GQ477350|MZB1|51237|marginal zone B and B1 cell-specific protein##DQ892627|MZB1|51237|marginal zone B and B1 cell-specific protein##EU176703|MZB1|51237|marginal zone B and B1 cell-specific protein##AK057549|MZB1|51237|marginal zone B and B1 cell-specific protein##AK292706|MZB1|51237|marginal zone B and B1 cell-specific protein##BC009931|MZB1|51237|marginal zone B and B1 cell-specific protein##BC021275|MZB1|51237|marginal zone B and B1 cell-specific protein##AF151024|MZB1|51237|marginal zone B and B1 cell-specific protein##NM_016459|MZB1|51237|marginal zone B and B1 cell-specific protein##NM_005847|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##NM_152685|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AF058317|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AJ269477|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AK290789|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AF170911|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##BC050261|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AK300935|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AF098277|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AK298337|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##AJ250807|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##BC019225|SLC23A1|9963|solute carrier family 23 (nucleobase transporters), member 1##NM_001161546|C5orf65|389333|chromosome 5 open reading frame 65##BC040037|SPATA24|202051|spermatogenesis associated 24##BC050563|SPATA24|202051|spermatogenesis associated 24##NM_194296|SPATA24|202051|spermatogenesis associated 24##AK098740|SPATA24|202051|spermatogenesis associated 24##BC030162|DNAJC18|202052|DnaJ (Hsp40) homolog, subfamily C, member 18	0.892098	CTCF.p2:-36:0.426	CTCF.p2:43:0.466
chr9	21434583	21434687	reg1020164.p1	4.943	+	K01900 NM_002170 BC104828 BC104830 V00545 V00550	-25495	+	AY255838 V00548 AB590747 CR541921 JN848522 BC074936 BC074937 BC104163 BC104164 M54886 V00544 V00549 NM_000605	-49309	-	AB464595 CU686802 HQ258738 JN848523 BC093988 BC112002 BC069427 NM_006900	-66596	-	NM_024013 V00538 V00537 BC112300 BC112302 BC074928 BC074929 AB464595 CU686802 HQ258738 JN848523	5844	+	AY358570 NM_176891	47676	-	AK124391 TSC_hg19_v1_chr9_-_21559834	125147	-	K01900|IFNA8|3445|interferon, alpha 8##NM_002170|IFNA8|3445|interferon, alpha 8##BC104828|IFNA8|3445|interferon, alpha 8##BC104830|IFNA8|3445|interferon, alpha 8##V00545|IFNA8|3445|interferon, alpha 8##V00550|IFNA8|3445|interferon, alpha 8##AY255838|IFNA2|3440|interferon, alpha 2##V00548|IFNA2|3440|interferon, alpha 2##CR541921|IFNA2|3440|interferon, alpha 2##BC074936|IFNA2|3440|interferon, alpha 2##BC074937|IFNA2|3440|interferon, alpha 2##BC104163|IFNA2|3440|interferon, alpha 2##BC104164|IFNA2|3440|interferon, alpha 2##M54886|IFNA2|3440|interferon, alpha 2##V00544|IFNA2|3440|interferon, alpha 2##V00549|IFNA2|3440|interferon, alpha 2##NM_000605|IFNA2|3440|interferon, alpha 2##HQ258738|IFNA1|3439|interferon, alpha 1##BC093988|IFNA13|3447|interferon, alpha 13##BC112002|IFNA1|3439|interferon, alpha 1##BC069427|IFNA13|3447|interferon, alpha 13##NM_006900|IFNA13|3447|interferon, alpha 13##NM_024013|IFNA1|3439|interferon, alpha 1##V00538|IFNA1|3439|interferon, alpha 1##V00537|IFNA1|3439|interferon, alpha 1##BC112300|IFNA1|3439|interferon, alpha 1##BC112302|IFNA1|3439|interferon, alpha 1##BC074928|IFNA1|3439|interferon, alpha 1##BC074929|IFNA1|3439|interferon, alpha 1##HQ258738|IFNA1|3439|interferon, alpha 1##AY358570|IFNE|338376|interferon, epsilon##NM_176891|IFNE|338376|interferon, epsilon##AK124391|MIR31HG|554202|MIR31 host gene (non-protein coding)	0.683086	CTCF.p2:10:0.683
chr1	235099171	235099293	reg1023988.p2	4.942	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-203458	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-353986	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-355374	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	192857	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	192999	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	225331	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr14	103857552	103857712	reg1025503.p2	4.942	+	TSC_hg19_v1_chr14_+_103851775 AF465413 BC024773 U64205	-5746	+	TSC_hg19_v1_chr14_+_103851772 BX161395	-5862	+	TSC_hg19_v1_chr14_+_103851700 NM_001128918 NM_001128919 NM_001128920 NM_001128921 NM_002376	-5929	+	CR542268 CU676412 M16364 TSC_hg19_v1_chr14_-_103988931	131248	-	M16451 L47647 TSC_hg19_v1_chr14_-_103989168 BC004914 BC019259 BC008323 BC001190 BC019281 BC010002 AK290101 AK312282 AK298198	131511	-	NM_001823 TSC_hg19_v1_chr14_-_103989206	131570	-	AF465413|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##BC024773|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##U64205|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##BX161395|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128918|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128919|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128920|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128921|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_002376|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##CR542268|CKB|1152|creatine kinase, brain##M16364|CKB|1152|creatine kinase, brain##M16451|CKB|1152|creatine kinase, brain##L47647|CKB|1152|creatine kinase, brain##BC004914|CKB|1152|creatine kinase, brain##BC019259|CKB|1152|creatine kinase, brain##BC008323|CKB|1152|creatine kinase, brain##BC001190|CKB|1152|creatine kinase, brain##BC019281|CKB|1152|creatine kinase, brain##BC010002|CKB|1152|creatine kinase, brain##AK290101|CKB|1152|creatine kinase, brain##AK312282|CKB|1152|creatine kinase, brain##AK298198|CKB|1152|creatine kinase, brain##NM_001823|CKB|1152|creatine kinase, brain	0.0	
chr14	69468869	69469049	reg1026303.p1	4.942	+	TSC_hg19_v1_chr14_-_69446038 NM_001102 NM_001130004 NM_001130005	-22896	-	TSC_hg19_v1_chr14_-_69446010 BC003576	-22950	-	TSC_hg19_v1_chr14_-_69445990 BC004984	-22967	-	TSC_hg19_v1_chr14_-_69619315 AL831932	150383	-	TSC_hg19_v1_chr14_-_69619740 AB463347 CU692762 BC022967 BX648006 AB058727	150716	-	TSC_hg19_v1_chr14_-_69619843 BC136632	150885	-	NM_001102|ACTN1|87|actinin, alpha 1##NM_001130004|ACTN1|87|actinin, alpha 1##NM_001130005|ACTN1|87|actinin, alpha 1##BC003576|ACTN1|87|actinin, alpha 1##BC004984|ACTN1|87|actinin, alpha 1##AL831932|DCAF5|8816|DDB1 and CUL4 associated factor 5##BC022967|DCAF5|8816|DDB1 and CUL4 associated factor 5##BX648006|DCAF5|8816|DDB1 and CUL4 associated factor 5##AB058727|DCAF5|8816|DDB1 and CUL4 associated factor 5##BC136632|DCAF5|8816|DDB1 and CUL4 associated factor 5	0.04273	
chr16	32176217	32176331	reg1027118.p1	4.942	+	TSC_hg19_v1_chr16_+_31885159 BC036367 BC127088 BC127089 AK292573	-291070	+	AF220492 TSC_hg19_v1_chr16_+_31885131	-291142	+	TSC_hg19_v1_chr16_+_31885114 AK096390	-291158	+	TSC_hg19_v1_chr16_-_32199418 AK300387	23145	-	AB023508 AB023509 BC096700 BC099842 NM_001243722 AK312220 CR541650	88384	+	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	511159	-	BC036367|ZNF267|10308|zinc finger protein 267##BC127088|ZNF267|10308|zinc finger protein 267##BC127089|ZNF267|10308|zinc finger protein 267##AK292573|ZNF267|10308|zinc finger protein 267##AF220492|ZNF267|10308|zinc finger protein 267##AK096390|ZNF267|10308|zinc finger protein 267##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AB023508|TP53TG3|24150|TP53 target 3##AB023509|TP53TG3|24150|TP53 target 3##BC096700|TP53TG3|24150|TP53 target 3##BC099842|TP53TG3|24150|TP53 target 3##NM_001243722|LOC729264|729264|TP53-target gene 3 protein-like##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3	0.998215	CTCF.p2:19:0.998
chr4	90579192	90579317	reg1027571.p1	4.942	+	TSC_hg19_v1_chr4_-_90229171 NM_198281	-350097	-	AK124616 TSC_hg19_v1_chr4_-_90228950	-350303	-	AK027653 NM_145715	-545287	+	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	178988	-	NM_001146055	180192	-	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	236808	+	NM_198281|GPRIN3|285513|GPRIN family member 3##AK124616|GPRIN3|285513|GPRIN family member 3##AK027653|TIGD2|166815|tigger transposable element derived 2##NM_145715|TIGD2|166815|tigger transposable element derived 2##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_001146055|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1	0.997432	CTCF.p2:16:0.997
chr5	149940026	149940154	reg1000453.p1	4.942	+	AK292448 NM_001543 U36600	-52377	+	TSC_hg19_v1_chr5_+_149865341 AB209107	-74651	+	TSC_hg19_v1_chr5_-_149829301 BC003401 BC001126 BC006784 BC110792 AK312179 BC091474 NM_001025070 NM_001025071 NM_005617	-110799	-	TSC_hg19_v1_chr5_+_149980641 AL831818 NM_001166208	40552	+	AK127049 NM_001166209	57115	+	TSC_hg19_v1_chr5_+_150020221 NM_001109974 NM_007286 AK290178 BC042624 BC146665 AB028952 BC152538 BC142683 AF499136 AF499137	80203	+	AK292448|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##NM_001543|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##U36600|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##AB209107|NDST1|3340|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1##BC003401|RPS14|6208|ribosomal protein S14##BC001126|RPS14|6208|ribosomal protein S14##BC006784|RPS14|6208|ribosomal protein S14##BC110792|RPS14|6208|ribosomal protein S14##AK312179|RPS14|6208|ribosomal protein S14##BC091474|RPS14|6208|ribosomal protein S14##NM_001025070|RPS14|6208|ribosomal protein S14##NM_001025071|RPS14|6208|ribosomal protein S14##NM_005617|RPS14|6208|ribosomal protein S14##AL831818|SYNPO|11346|synaptopodin##NM_001166208|SYNPO|11346|synaptopodin##AK127049|SYNPO|11346|synaptopodin##NM_001166209|SYNPO|11346|synaptopodin##NM_001109974|SYNPO|11346|synaptopodin##NM_007286|SYNPO|11346|synaptopodin##AK290178|SYNPO|11346|synaptopodin##BC042624|SYNPO|11346|synaptopodin##BC146665|SYNPO|11346|synaptopodin##AB028952|SYNPO|11346|synaptopodin##BC152538|SYNPO|11346|synaptopodin##BC142683|SYNPO|11346|synaptopodin##AF499136|SYNPO|11346|synaptopodin##AF499137|SYNPO|11346|synaptopodin	0.0	
chr5	35617794	35617975	reg1029868.p1	4.942	+	NM_000949	-387062	-	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	-387307	-	NM_001204314 NM_001204315 NM_001204316 NM_001204317 NM_001204318	-499661	-	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	125	+	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	239149	+	NM_001042625 BC017586 NM_144647	320924	-	NM_000949|PRLR|5618|prolactin receptor##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##NM_001204314|PRLR|5618|prolactin receptor##NM_001204315|PRLR|5618|prolactin receptor##NM_001204316|PRLR|5618|prolactin receptor##NM_001204317|PRLR|5618|prolactin receptor##NM_001204318|PRLR|5618|prolactin receptor##BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like	0.989157	CTCF.p2:17:0.989
chr9	92134050	92134178	reg1027722.p1	4.942	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-21107	-	BC054500 NM_001142287 NM_006378	-39504	-	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-200696	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	85867	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	1271005	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1429922	+	BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase	0.0	
chr11	118691801	118691935	reg1018858.p2	4.941	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-29934	-	TSC_hg19_v1_chr11_-_118661865 Z11685	-29989	-	TSC_hg19_v1_chr11_-_118661860 BC026228	-30009	-	AK291512 NM_001716 BC110352 X68149 AB464488	62692	+	NM_032966 X68829	72232	+	AB094091 NM_182557	89744	-	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like	0.0	
chr11	31509528	31509670	reg1028963.p1	4.941	+	TSC_hg19_v1_chr11_+_31391404 NM_181706 AK123087 AL833128 AK289665 BC036571 BC044931 BC063804	-118197	+	AY247970 AK126066 NM_181807	-118261	-	BX647348 NM_020869	-495367	-	AK311611 BC023595 TSC_hg19_v1_chr11_-_31531154 AK310496 AK057788 NM_144981	21545	-	AK000505 NM_019040 TSC_hg19_v1_chr11_+_31531319 AK304885 AL136677 DQ891468 DQ894651 BC012514 AB463022 AM393460 AM393857	21714	+	AK094249 TSC_hg19_v1_chr11_-_31825606	316001	-	NM_181706|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK123087|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AL833128|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK289665|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC036571|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC044931|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC063804|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AY247970|DCDC1|341019|doublecortin domain containing 1##NM_181807|DCDC1|341019|doublecortin domain containing 1##BX647348|DCDC5|100506627|doublecortin domain containing 5##NM_020869|DCDC5|100506627|doublecortin domain containing 5##AK311611|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC023595|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK310496|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK057788|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_144981|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK000505|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##NM_019040|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AK304885|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AL136677|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##DQ891468|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##DQ894651|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##BC012514|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AM393460|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AM393857|ELP4|26610|elongation protein 4 homolog (S. cerevisiae)##AK094249|PAX6|5080|paired box 6	0.90873	CTCF.p2:-3:0.909
chr12	6376218	6376319	reg1029720.p2	4.941	+	TSC_hg19_v1_chr12_+_6309565 NM_001769 AK315219 AK308700 AK296332 AK309527 AY966455 X60111 AK296894 AK298431 BC011988 M38690 AY423720 DQ891314 DQ894498 AB590218 CU680148 L34068	-66698	+	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	-142509	-	AJ272204 NM_020373	-320871	-	AK001527 NM_018173 BC104751 BC105961 BC109095	43365	+	TSC_hg19_v1_chr12_+_6419886 BC040273	43617	+	AK023741 NM_001144856	43830	+	NM_001769|CD9|928|CD9 molecule##AK315219|CD9|928|CD9 molecule##AK308700|CD9|928|CD9 molecule##AK296332|CD9|928|CD9 molecule##AK309527|CD9|928|CD9 molecule##AY966455|CD9|928|CD9 molecule##X60111|CD9|928|CD9 molecule##AK296894|CD9|928|CD9 molecule##AK298431|CD9|928|CD9 molecule##BC011988|CD9|928|CD9 molecule##M38690|CD9|928|CD9 molecule##AY423720|CD9|928|CD9 molecule##DQ891314|CD9|928|CD9 molecule##DQ894498|CD9|928|CD9 molecule##L34068|CD9|928|CD9 molecule##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor##AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##AK001527|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_018173|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC104751|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC105961|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC109095|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC040273|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AK023741|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144856|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6	0.0	
chr16	16119741	16119861	reg1026819.p3	4.941	+	TSC_hg19_v1_chr16_+_16043442 L05628 NM_004996 NM_019862 NM_019898 NM_019899 NM_019900 X78338	-76437	+	AL832498 TSC_hg19_v1_chr16_-_15982471	-137316	-	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	-137348	-	TSC_hg19_v1_chr16_+_16146613 HQ917065	26817	+	AF168791 AM711638 AM774324 BC050733 AF076622 BC131732 U66689 NM_001079528 NM_001171 AY078405 AK298295	197519	-	TSC_hg19_v1_chr16_+_16326401 NM_001004067	206596	+	L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##AL832498|FOPNL|123811|FGFR1OP N-terminal like##AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##AF168791|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM711638|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM774324|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC050733|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AF076622|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC131732|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001079528|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001171|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AY078405|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AK298295|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001004067|NOMO3|408050|NODAL modulator 3	0.029908	
chr21	26268712	26268893	reg1002887.p2	4.941	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-467734	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-3898029	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-3898112	+	TSC_hg19_v1_chr21_+_26934442 AF402776	665670	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	711013	-	NM_021219 TSC_hg19_v1_chr21_+_27011719	742851	+	AK124194|FLJ42200|400860|FLJ42200 protein##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##NM_021219|JAM2|58494|junctional adhesion molecule 2	0.0	
chr4	39979271	39979354	reg1013703.p1	4.941	+	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	-279508	+	TSC_hg19_v1_chr4_-_39640486 AK023351 BC008502 NM_174921 AK307146	-338756	-	TSC_hg19_v1_chr4_+_39529635 AK056558	-449686	+	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	26	-	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	281	-	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	79220	+	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK023351|C4orf34|201895|chromosome 4 open reading frame 34##BC008502|C4orf34|201895|chromosome 4 open reading frame 34##NM_174921|C4orf34|201895|chromosome 4 open reading frame 34##AK307146|C4orf34|201895|chromosome 4 open reading frame 34##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2	0.0	
chr7	154624424	154624548	reg1026840.p1	4.941	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	-622101	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	-874728	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	-1040086	+	TSC_hg19_v1_chr7_+_154720213 BC033053 AK311721 AK056609 BC050402	95711	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	170184	-	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	170725	+	AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##BC033053|LOC100132707|100132707|uncharacterized LOC100132707##AK311721|LOC100132707|100132707|uncharacterized LOC100132707##AK056609|LOC100132707|100132707|uncharacterized LOC100132707##BC050402|LOC100132707|100132707|uncharacterized LOC100132707##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781	0.98361	CTCF.p2:-11:0.984
chr9	94712562	94712654	reg1023513.p1	4.941	+	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	-219	-	TSC_hg19_v1_chr9_-_94711095 BC033697	-1480	-	TSC_hg19_v1_chr9_-_94186159 NM_005384	-526426	-	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	165056	-	TSC_hg19_v1_chr9_-_95055945 AB209234 D28473 AK293014	343330	-	U04953 TSC_hg19_v1_chr9_-_95055976 BX647236 AK308202 BX647430 NM_013417 BX537417 BX537429 BX538109 BX647071 BX648567	343367	-	BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_005384|NFIL3|4783|nuclear factor, interleukin 3 regulated##AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AB209234|IARS|3376|isoleucyl-tRNA synthetase##D28473|IARS|3376|isoleucyl-tRNA synthetase##AK293014|IARS|3376|isoleucyl-tRNA synthetase##U04953|IARS|3376|isoleucyl-tRNA synthetase##BX647236|IARS|3376|isoleucyl-tRNA synthetase##AK308202|IARS|3376|isoleucyl-tRNA synthetase##BX647430|IARS|3376|isoleucyl-tRNA synthetase##NM_013417|IARS|3376|isoleucyl-tRNA synthetase##BX537417|IARS|3376|isoleucyl-tRNA synthetase##BX537429|IARS|3376|isoleucyl-tRNA synthetase##BX538109|IARS|3376|isoleucyl-tRNA synthetase##BX647071|IARS|3376|isoleucyl-tRNA synthetase##BX648567|IARS|3376|isoleucyl-tRNA synthetase	0.96311	CTCF.p2:-20:0.963
chr12	116632951	116633105	reg1027256.p2	4.940	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-1510888	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1786810	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1789104	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	81922	-	TSC_hg19_v1_chr12_-_116715263 AY338463	82132	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	338201	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.726356	CTCF.p2:18:0.704
chr1	245242487	245242588	reg1028729.p1	4.940	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-108854	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-108907	+	AK090927 AX746687 TSC_hg19_v1_chr1_+_245133411	-109175	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	75771	+	AK024733 NM_022743	1338174	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	1428017	-	AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK090927|EFCAB2|84288|EF-hand calcium binding domain 2##AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3	0.497555	CTCF.p2:-13:0.498
chr20	58781404	58781472	reg1040366.p1	4.940	+	TSC_hg19_v1_chr20_+_58713521 AK309218 AK092805 AX747739	-67904	+	TSC_hg19_v1_chr20_+_58630979 AK091179 AX746831 NM_173644	-150443	+	BC062570 NM_021810 AK074477	-210016	+	TSC_hg19_v1_chr20_+_59827453 BC101651 BC112150 NM_001794 AK315192 L34059	1046067	+	AK308345 NM_001252338	1293038	+	NM_001252339 AK124724	1393386	+	AK092805|LOC284757|284757|uncharacterized LOC284757##AK091179|C20orf197|284756|chromosome 20 open reading frame 197##NM_173644|C20orf197|284756|chromosome 20 open reading frame 197##BC062570|CDH26|60437|cadherin 26##NM_021810|CDH26|60437|cadherin 26##AK074477|CDH26|60437|cadherin 26##BC101651|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC112150|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001794|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK315192|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##L34059|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK308345|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252338|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252339|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK124724|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)	0.504839	CTCF.p2:3:0.505
chr21	48028917	48029066	reg1026355.p2	4.940	+	BC001766 TSC_hg19_v1_chr21_-_48024996 BC041935 CS301701 CS301702 NM_006272	-3982	-	AK056738 TSC_hg19_v1_chr21_+_47878972 AB273729	-149995	+	TSC_hg19_v1_chr21_+_47878854 AK303351 NM_001146114 NM_001146115 NM_001146116 NM_015151 NM_206889 NM_206890 NM_206891 BC038443 BC033718 AF490768	-150129	+	TSC_hg19_v1_chr21_+_48055078 AK123650	26086	+	NM_001242864 NM_001242865 NM_001242866 NM_001535 NM_206962 TSC_hg19_v1_chr21_+_48055572 AK123352 AY786414 FJ436410 FJ436411 FJ436412 U79286 X99209 U80213 AK312573 AL833586	26552	+	AK223157 TSC_hg19_v1_chr21_+_48055585 BC000727	26595	+	BC001766|S100B|6285|S100 calcium binding protein B##BC041935|S100B|6285|S100 calcium binding protein B##NM_006272|S100B|6285|S100 calcium binding protein B##AK056738|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AB273729|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AK303351|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146114|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146115|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146116|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_015151|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206889|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206890|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206891|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##BC038443|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##BC033718|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AF490768|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AK123650|PRMT2|3275|protein arginine methyltransferase 2##NM_001242864|PRMT2|3275|protein arginine methyltransferase 2##NM_001242865|PRMT2|3275|protein arginine methyltransferase 2##NM_001242866|PRMT2|3275|protein arginine methyltransferase 2##NM_001535|PRMT2|3275|protein arginine methyltransferase 2##NM_206962|PRMT2|3275|protein arginine methyltransferase 2##AK123352|PRMT2|3275|protein arginine methyltransferase 2##AY786414|PRMT2|3275|protein arginine methyltransferase 2##FJ436410|PRMT2|3275|protein arginine methyltransferase 2##FJ436411|PRMT2|3275|protein arginine methyltransferase 2##FJ436412|PRMT2|3275|protein arginine methyltransferase 2##U79286|PRMT2|3275|protein arginine methyltransferase 2##X99209|PRMT2|3275|protein arginine methyltransferase 2##U80213|PRMT2|3275|protein arginine methyltransferase 2##AK312573|PRMT2|3275|protein arginine methyltransferase 2##AL833586|PRMT2|3275|protein arginine methyltransferase 2##AK223157|PRMT2|3275|protein arginine methyltransferase 2##BC000727|PRMT2|3275|protein arginine methyltransferase 2	0.403179	CTCF.p2:30:0.403
chr4	77905412	77905586	reg1030171.p1	4.940	+	TSC_hg19_v1_chr4_+_77871005 AK001711 AL110300 AK302700 BC063615 GU727629 AB587498	-34499	+	TSC_hg19_v1_chr4_+_77870908 BC064934	-34587	+	TSC_hg19_v1_chr4_+_77870905 BC008083 NM_018243	-34614	+	AK124592 CR627457 TSC_hg19_v1_chr4_+_77954068	48506	+	TSC_hg19_v1_chr4_-_77997145 BC000420 BC004975 NM_006835 AB209766 AK301111 AK312632	91653	-	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	172862	+	AK001711|SEPT11|55752|septin 11##AL110300|SEPT11|55752|septin 11##AK302700|SEPT11|55752|septin 11##BC063615|SEPT11|55752|septin 11##GU727629|SEPT11|55752|septin 11##BC064934|SEPT11|55752|septin 11##BC008083|SEPT11|55752|septin 11##NM_018243|SEPT11|55752|septin 11##AK124592|SEPT11|55752|septin 11##BC000420|CCNI|10983|cyclin I##BC004975|CCNI|10983|cyclin I##NM_006835|CCNI|10983|cyclin I##AB209766|CCNI|10983|cyclin I##AK301111|CCNI|10983|cyclin I##AK312632|CCNI|10983|cyclin I##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2	0.035755	
chr2	242196972	242197075	reg1028610.p1	4.939	+	AY617079 AY617080 NM_001001666 NM_001001891	-69100	+	AK294043 TSC_hg19_v1_chr2_+_242089896 BC013001 BC000910 NM_002712 Z50749 BC012397 AB385583 BT007296 BT020134	-107132	+	CR749231 NM_001252120	-107630	-	TSC_hg19_v1_chr2_-_242212216 M64098	15197	-	TSC_hg19_v1_chr2_-_242212245 AK300312 NM_001243900 NM_203346	15221	-	TSC_hg19_v1_chr2_-_242212511 AK309075	15493	-	AY617079|ANO7|50636|anoctamin 7##AY617080|ANO7|50636|anoctamin 7##NM_001001666|ANO7|50636|anoctamin 7##NM_001001891|ANO7|50636|anoctamin 7##AK294043|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC013001|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC000910|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##NM_002712|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##Z50749|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC012397|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT007296|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT020134|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##CR749231|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252120|PASK|23178|PAS domain containing serine/threonine kinase##M64098|HDLBP|3069|high density lipoprotein binding protein##AK300312|HDLBP|3069|high density lipoprotein binding protein##NM_001243900|HDLBP|3069|high density lipoprotein binding protein##NM_203346|HDLBP|3069|high density lipoprotein binding protein##AK309075|HDLBP|3069|high density lipoprotein binding protein	0.0	
chr5	179417681	179417774	reg1029579.p2	4.939	+	TSC_hg19_v1_chr5_-_179334854 AB014576 BC129994 NM_015043 NM_198868	-82875	-	AB449893 TSC_hg19_v1_chr5_-_179334837 AB463306	-82897	-	TSC_hg19_v1_chr5_+_179286046 BC040901	-131732	+	AK313089 BC017100 TSC_hg19_v1_chr5_-_179498743 BC082267	80964	-	TSC_hg19_v1_chr5_-_179499095 BC113864 BC114472 AB209800 AY083998 NM_018434 BC108306	81338	-	TSC_hg19_v1_chr5_-_179636160 NM_175062 BC036802	218449	-	AB014576|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##BC129994|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_015043|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_198868|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##AB449893|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##AK313089|RNF130|55819|ring finger protein 130##BC017100|RNF130|55819|ring finger protein 130##BC082267|RNF130|55819|ring finger protein 130##BC113864|RNF130|55819|ring finger protein 130##BC114472|RNF130|55819|ring finger protein 130##AB209800|RNF130|55819|ring finger protein 130##AY083998|RNF130|55819|ring finger protein 130##NM_018434|RNF130|55819|ring finger protein 130##BC108306|RNF130|55819|ring finger protein 130##NM_175062|RASGEF1C|255426|RasGEF domain family, member 1C##BC036802|RASGEF1C|255426|RasGEF domain family, member 1C	0.830069	CTCF.p2:-3:0.830
chr9	42314374	42314480	reg1027307.p1	4.939	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-359513	-	BC040528 NM_001113541 NM_015667	-813749	+	BC040528 NM_001113541 NM_015667 NM_001242613	-987048	-	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	53931	+	NM_001099279 NM_199244	402806	+	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	819060	-	BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2	0.991931	CTCF.p2:6:0.992
chr10	59912599	59912731	reg1030684.p2	4.938	+	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	-1791639	-	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	-1791651	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	-2553891	+	TSC_hg19_v1_chr10_-_60027655 BC016612 BC065709 NM_152230	114996	-	BC005962 TSC_hg19_v1_chr10_+_60028929 NM_018464 BC059168 AF220049 BC008474 BC007043 AY960578 AK312017	116281	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	182171	+	AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##BC016612|IPMK|253430|inositol polyphosphate multikinase##BC065709|IPMK|253430|inositol polyphosphate multikinase##NM_152230|IPMK|253430|inositol polyphosphate multikinase##BC005962|CISD1|55847|CDGSH iron sulfur domain 1##NM_018464|CISD1|55847|CDGSH iron sulfur domain 1##BC059168|CISD1|55847|CDGSH iron sulfur domain 1##AF220049|CISD1|55847|CDGSH iron sulfur domain 1##BC008474|CISD1|55847|CDGSH iron sulfur domain 1##BC007043|CISD1|55847|CDGSH iron sulfur domain 1##AY960578|CISD1|55847|CDGSH iron sulfur domain 1##AK312017|CISD1|55847|CDGSH iron sulfur domain 1##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	0.061164	
chr10	64743264	64743412	reg1023074.p1	4.938	+	AK312813 NM_001136178	-164412	-	TSC_hg19_v1_chr10_-_64576127 NM_000399 NM_001136177 NM_001136179	-167191	-	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	-167241	-	TSC_hg19_v1_chr10_+_64893044 NM_030759 AK054957 AL136656	149693	+	TSC_hg19_v1_chr10_+_64893098 AF267866 AK301656 AK225257 AK225256 AY267839 AY267840 BC011707 AB590768 EU832288 EU832373	149808	+	BC126403 BC143722 TSC_hg19_v1_chr10_-_65029004 BX537954 NM_004241 BC108649	285577	-	AK312813|EGR2|1959|early growth response 2##NM_001136178|EGR2|1959|early growth response 2##NM_000399|EGR2|1959|early growth response 2##NM_001136177|EGR2|1959|early growth response 2##NM_001136179|EGR2|1959|early growth response 2##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2##NM_030759|NRBF2|29982|nuclear receptor binding factor 2##AK054957|NRBF2|29982|nuclear receptor binding factor 2##AL136656|NRBF2|29982|nuclear receptor binding factor 2##AF267866|NRBF2|29982|nuclear receptor binding factor 2##AK301656|NRBF2|29982|nuclear receptor binding factor 2##AK225257|NRBF2|29982|nuclear receptor binding factor 2##AK225256|NRBF2|29982|nuclear receptor binding factor 2##AY267839|NRBF2|29982|nuclear receptor binding factor 2##AY267840|NRBF2|29982|nuclear receptor binding factor 2##BC011707|NRBF2|29982|nuclear receptor binding factor 2##EU832288|NRBF2|29982|nuclear receptor binding factor 2##EU832373|NRBF2|29982|nuclear receptor binding factor 2##BC126403|JMJD1C|221037|jumonji domain containing 1C##BC143722|JMJD1C|221037|jumonji domain containing 1C##BX537954|JMJD1C|221037|jumonji domain containing 1C##NM_004241|JMJD1C|221037|jumonji domain containing 1C##BC108649|JMJD1C|221037|jumonji domain containing 1C	0.938174	CTCF.p2:38:0.938
chr12	33580133	33580283	reg1029821.p2	4.938	+	EU520483 EU520484 EU520485 EU520486 AB590796 HQ258660 TSC_hg19_v1_chr12_-_33049733 X97675 BC094762 BC126199 BC143966 BC143967 BC070083 NM_001005242 NM_004572	-530473	-	AF132939 CU677373 DQ893063 DQ896315 BC015625 TSC_hg19_v1_chr12_-_32908835 AK024057 AK026619 AK130935 NM_001040436	-671367	-	TSC_hg19_v1_chr12_+_32832277 AF061795 AF151685 AB384831 CU692924 DQ891544 DQ894732 BC000136	-747885	+	BC101024 BC101025 TSC_hg19_v1_chr12_-_33592705 AY198413 NM_198992	12458	-	AJ312278 NM_032834	595007	+	TSC_hg19_v1_chr12_+_34175402 BC022336	595178	+	EU520483|PKP2|5318|plakophilin 2##EU520484|PKP2|5318|plakophilin 2##EU520485|PKP2|5318|plakophilin 2##EU520486|PKP2|5318|plakophilin 2##HQ258660|PKP2|5318|plakophilin 2##X97675|PKP2|5318|plakophilin 2##BC094762|PKP2|5318|plakophilin 2##BC126199|PKP2|5318|plakophilin 2##BC143966|PKP2|5318|plakophilin 2##BC143967|PKP2|5318|plakophilin 2##BC070083|PKP2|5318|plakophilin 2##NM_001005242|PKP2|5318|plakophilin 2##NM_004572|PKP2|5318|plakophilin 2##AF132939|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##DQ893063|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##DQ896315|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##BC015625|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK024057|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK026619|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK130935|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##NM_001040436|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AF061795|DNM1L|10059|dynamin 1-like##AF151685|DNM1L|10059|dynamin 1-like##DQ891544|DNM1L|10059|dynamin 1-like##DQ894732|DNM1L|10059|dynamin 1-like##BC101024|SYT10|341359|synaptotagmin X##BC101025|SYT10|341359|synaptotagmin X##AY198413|SYT10|341359|synaptotagmin X##NM_198992|SYT10|341359|synaptotagmin X##AJ312278|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_032834|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC022336|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)	0.0	
chr12	93774544	93774689	reg1026649.p1	4.938	+	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	-2724	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-451518	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-451573	-	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	61070	-	TSC_hg19_v1_chr12_-_93835718 D83004	61102	-	TSC_hg19_v1_chr12_-_93835724 BC000396	61122	-	NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC000396|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.861774	CTCF.p2:23:0.862
chr13	24534848	24534967	reg1026708.p2	4.938	+	NM_001007537 CU691876 BC137004 BC137006 BC144450	-63749	-	NM_001135816 BC142999	-71315	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	-71393	-	BX648445 TSC_hg19_v1_chr13_+_24553892	18958	+	TSC_hg19_v1_chr13_+_24553943 BX648244 BC043582	19026	+	TSC_hg19_v1_chr13_+_24734858 AK092754 AX747708 NM_001166271 NM_153023 AK055770	199988	+	NM_001007537|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137004|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC137006|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##BC144450|C1QTNF9B|387911|C1q and tumor necrosis factor related protein 9B##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##BX648244|SPATA13|221178|spermatogenesis associated 13##AK092754|SPATA13|221178|spermatogenesis associated 13##NM_001166271|SPATA13|221178|spermatogenesis associated 13##NM_153023|SPATA13|221178|spermatogenesis associated 13##AK055770|SPATA13|221178|spermatogenesis associated 13	0.427903	CTCF.p2:-28:0.428
chr16	68794626	68794792	reg1024109.p1	4.938	+	TSC_hg19_v1_chr16_+_68771304 Z18923	-23398	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	-23464	+	BC144283 TSC_hg19_v1_chr16_+_68771216 AK290012 Z13009	-23490	+	TSC_hg19_v1_chr16_+_68877504 BC092500 AB051533 NM_024562 AB463318	82796	+	AK291400 NM_001199280	344757	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	345431	+	Z18923|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC144283|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK290012|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##Z13009|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC092500|TMCO7|79613|transmembrane and coiled-coil domains 7##AB051533|TMCO7|79613|transmembrane and coiled-coil domains 7##NM_024562|TMCO7|79613|transmembrane and coiled-coil domains 7##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3	0.0	
chr9	116279521	116279701	reg1028248.p2	4.938	+	AF463495 NM_130795 AK096840 BC042555 CU692096 AF490840	-15830	+	TSC_hg19_v1_chr9_+_116226007 AK125059 NM_017790 AK074977	-53597	+	AK128127 NM_144488	-72601	+	TSC_hg19_v1_chr9_+_116327336 AK289666 AK301515 AK310705 NM_134427	47721	+	AF006609 NM_021106	63328	+	U27655 AK125094 TSC_hg19_v1_chr9_+_116343207	63577	+	AF463495|RGS3|5998|regulator of G-protein signaling 3##NM_130795|RGS3|5998|regulator of G-protein signaling 3##AK096840|RGS3|5998|regulator of G-protein signaling 3##BC042555|RGS3|5998|regulator of G-protein signaling 3##AF490840|RGS3|5998|regulator of G-protein signaling 3##AK125059|RGS3|5998|regulator of G-protein signaling 3##NM_017790|RGS3|5998|regulator of G-protein signaling 3##AK074977|RGS3|5998|regulator of G-protein signaling 3##AK128127|RGS3|5998|regulator of G-protein signaling 3##NM_144488|RGS3|5998|regulator of G-protein signaling 3##AK289666|RGS3|5998|regulator of G-protein signaling 3##AK301515|RGS3|5998|regulator of G-protein signaling 3##AK310705|RGS3|5998|regulator of G-protein signaling 3##NM_134427|RGS3|5998|regulator of G-protein signaling 3##AF006609|RGS3|5998|regulator of G-protein signaling 3##NM_021106|RGS3|5998|regulator of G-protein signaling 3##U27655|RGS3|5998|regulator of G-protein signaling 3##AK125094|RGS3|5998|regulator of G-protein signaling 3	0.0	
chr1	186274247	186274365	reg1028838.p1	4.937	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	-8899	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	-570730	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-987836	-	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	69951	-	BC016514 TSC_hg19_v1_chr1_-_186344361	70039	-	TSC_hg19_v1_chr1_-_186344387 BC094764	70079	-	NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)##BC016514|TPR|7175|translocated promoter region (to activated MET oncogene)##BC094764|TPR|7175|translocated promoter region (to activated MET oncogene)	0.995717	CTCF.p2:-10:0.996
chr20	36158043	36158167	reg1025779.p1	4.937	+	TSC_hg19_v1_chr20_-_36156284 AK074498 NM_001167820 NM_006698	-1793	-	TSC_hg19_v1_chr20_-_36156274 AK124822 AF053470 BC047692 AL049288	-1852	-	NM_001167822 TSC_hg19_v1_chr20_-_36156087 BC071704 NM_001167821	-1998	-	TSC_hg19_v1_chr20_+_36322440 NM_030877 BC121005 BC121006 AF239607	164325	+	AK074663 AK130301 TSC_hg19_v1_chr20_+_36322443	164339	+	TSC_hg19_v1_chr20_+_36322503 AF370431 AK293420	164378	+	AK074498|BLCAP|10904|bladder cancer associated protein##NM_001167820|BLCAP|10904|bladder cancer associated protein##NM_006698|BLCAP|10904|bladder cancer associated protein##AK124822|BLCAP|10904|bladder cancer associated protein##AF053470|BLCAP|10904|bladder cancer associated protein##BC047692|BLCAP|10904|bladder cancer associated protein##AL049288|BLCAP|10904|bladder cancer associated protein##NM_001167822|BLCAP|10904|bladder cancer associated protein##BC071704|BLCAP|10904|bladder cancer associated protein##NM_001167821|BLCAP|10904|bladder cancer associated protein##NM_030877|CTNNBL1|56259|catenin, beta like 1##BC121005|CTNNBL1|56259|catenin, beta like 1##BC121006|CTNNBL1|56259|catenin, beta like 1##AF239607|CTNNBL1|56259|catenin, beta like 1##AK074663|CTNNBL1|56259|catenin, beta like 1##AK130301|CTNNBL1|56259|catenin, beta like 1##AF370431|CTNNBL1|56259|catenin, beta like 1##AK293420|CTNNBL1|56259|catenin, beta like 1	0.85115	CTCF.p2:82:0.851
chr3	153758195	153758320	reg1028115.p1	4.937	+	AF086445 NM_001101337	-555974	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-878209	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-878231	+	AK127282 NM_001251962	80534	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	80945	+	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	284003	-	AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36	0.956094	CTCF.p2:14:0.956
chr3	195946497	195946677	reg1024152.p2	4.937	+	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	-3193	+	BC034801 BC022078 NM_001039617 AK122907	-8306	-	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-137571	-	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	67948	-	BC046355 NM_005017 TSC_hg19_v1_chr3_-_196014591 AK304534 AK309073	68031	-	TSC_hg19_v1_chr3_-_196045112 BC015348 BC021177 NM_152773	98526	-	AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##BC046355|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##NM_005017|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK304534|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309073|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##BC015348|TCTEX1D2|255758|Tctex1 domain containing 2##BC021177|TCTEX1D2|255758|Tctex1 domain containing 2##NM_152773|TCTEX1D2|255758|Tctex1 domain containing 2	0.708183	CTCF.p2:41:0.708
chr3	53144313	53144435	reg1026206.p2	4.937	+	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	-64311	-	TSC_hg19_v1_chr3_-_53080023 BC014614 AF168132	-64380	-	TSC_hg19_v1_chr3_-_53079286 NM_001005159	-65065	-	TSC_hg19_v1_chr3_-_53164452 AJ318099 BC043595 NM_052859	20077	-	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	50845	+	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	145637	-	AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1##BC014614|SFMBT1|51460|Scm-like with four mbt domains 1##AF168132|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005159|SFMBT1|51460|Scm-like with four mbt domains 1##AJ318099|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043595|RFT1|91869|RFT1 homolog (S. cerevisiae)##NM_052859|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase	0.200048	CTCF.p2:12:0.200
chr5	175789005	175789186	reg1021588.p2	4.937	+	TSC_hg19_v1_chr5_-_175788768 BC006316 BC010448 BC012848 AK024675 AK225073 AK315428 BC017097 AL390217 BX648859 NM_001079684 NM_001079685 NM_020444	-332	-	TSC_hg19_v1_chr5_+_175665384 BC037298 BC066980 NM_198567 AK299336	-123705	+	BC028606 NM_001079529	-277217	+	TSC_hg19_v1_chr5_+_175792493 BC059361 NM_173664 AK096568	3394	+	HQ257929 AY561704 CR457169 NM_016391 BC032424 TSC_hg19_v1_chr5_-_175815607 BC040106 AK303281 AF161460 AK300883 BC019331	26554	-	TSC_hg19_v1_chr5_+_175815751 BC000587 BC007502 NM_138820 DQ891893 DQ895080	26679	+	BC006316|KIAA1191|57179|KIAA1191##BC010448|KIAA1191|57179|KIAA1191##BC012848|KIAA1191|57179|KIAA1191##AK315428|KIAA1191|57179|KIAA1191##BC017097|KIAA1191|57179|KIAA1191##AL390217|KIAA1191|57179|KIAA1191##BX648859|KIAA1191|57179|KIAA1191##NM_001079684|KIAA1191|57179|KIAA1191##NM_001079685|KIAA1191|57179|KIAA1191##NM_020444|KIAA1191|57179|KIAA1191##BC037298|C5orf25|375484|chromosome 5 open reading frame 25##BC066980|C5orf25|375484|chromosome 5 open reading frame 25##NM_198567|C5orf25|375484|chromosome 5 open reading frame 25##AK299336|C5orf25|375484|chromosome 5 open reading frame 25##BC028606|FAM153B|202134|family with sequence similarity 153, member B##NM_001079529|FAM153B|202134|family with sequence similarity 153, member B##BC059361|ARL10|285598|ADP-ribosylation factor-like 10##NM_173664|ARL10|285598|ADP-ribosylation factor-like 10##HQ257929|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##AY561704|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##CR457169|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##NM_016391|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##BC032424|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##BC040106|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##AK303281|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##AF161460|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##AK300883|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##BC019331|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##BC007502|HIGD2A|192286|HIG1 hypoxia inducible domain family, member 2A##NM_138820|HIGD2A|192286|HIG1 hypoxia inducible domain family, member 2A##DQ891893|HIGD2A|192286|HIG1 hypoxia inducible domain family, member 2A##DQ895080|HIGD2A|192286|HIG1 hypoxia inducible domain family, member 2A	0.0	
chr5	55216715	55216821	reg1027984.p1	4.937	+	NM_001242636 NM_001242639	-67619	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-69499	+	NM_001166534 AK093439 AX748127	-154043	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	73995	-	AK123389 NM_024669	312417	-	NM_005921	894131	+	NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##NM_001166534|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##AK093439|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.740422	CTCF.p2:25:0.740
chr6	101112292	101112406	reg1027826.p2	4.937	+	NM_005068 U70212	-200799	-	AK123634 NM_001040179 NM_032503 AF347063	-670239	-	AY004253 NM_021620	-1057700	+	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	216751	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	216867	-	TSC_hg19_v1_chr6_-_101329241 BC026066 AK299117	216894	-	NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC026066|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK299117|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.773447	CTCF.p2:-13:0.773
chr6	106241143	106241279	reg1025348.p1	4.937	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-390216	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-390253	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-390365	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	292985	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	293024	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	305593	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.988068	CTCF.p2:-7:0.988
chr11	119598984	119599076	reg1022627.p2	4.936	+	BC037832 NM_006288	-304787	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-305121	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	-346631	-	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	352	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	400516	-	AK299472 TSC_hg19_v1_chr11_-_120008323	409242	-	BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29	0.0	
chr1	227636921	227637021	reg1027880.p2	4.936	+	TSC_hg19_v1_chr1_-_227506194 NM_003607 NM_014826 U59305	-130921	-	TSC_hg19_v1_chr1_+_227128004 AB073905	-508947	+	TSC_hg19_v1_chr1_+_227127998 AK074693 AK092784 AK126200 AK293571 AK297735 AX747728 AK090494 AK301012 AX746479	-508976	+	TSC_hg19_v1_chr1_+_227751254 NM_178549 AK026475 AK307248 BC042500	114267	+	AK311313 TSC_hg19_v1_chr1_+_227751265	114310	+	AK055266 AK093736 BC032775 TSC_hg19_v1_chr1_+_227916386	279346	+	NM_003607|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##NM_014826|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##U59305|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##AB073905|ADCK3|56997|aarF domain containing kinase 3##AK074693|ADCK3|56997|aarF domain containing kinase 3##AK092784|ADCK3|56997|aarF domain containing kinase 3##AK126200|ADCK3|56997|aarF domain containing kinase 3##AK293571|ADCK3|56997|aarF domain containing kinase 3##AK297735|ADCK3|56997|aarF domain containing kinase 3##AK090494|ADCK3|56997|aarF domain containing kinase 3##AK301012|ADCK3|56997|aarF domain containing kinase 3##NM_178549|ZNF678|339500|zinc finger protein 678##AK026475|ZNF678|339500|zinc finger protein 678##AK307248|ZNF678|339500|zinc finger protein 678##BC042500|ZNF678|339500|zinc finger protein 678##AK311313|ZNF678|339500|zinc finger protein 678##AK055266|LOC100130093|100130093|uncharacterized LOC100130093##AK093736|LOC100130093|100130093|uncharacterized LOC100130093	0.970817	CTCF.p2:-4:0.971
chr6	24936170	24936311	reg1032134.p1	4.936	+	TSC_hg19_v1_chr6_-_24936189 AK299047	-57	-	AB002384 NM_014722	-25046	-	U49187 AK300138 BC001232 NM_015864	-58723	-	TSC_hg19_v1_chr6_+_25279316 BC040903	343078	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	343418	+	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	343654	+	AK299047|FAM65B|9750|family with sequence similarity 65, member B##AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A	0.052187	
chr20	48001200	48001307	reg1027031.p1	4.935	+	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-106058	+	TSC_hg19_v1_chr20_+_47895176 BC042807 CR936805	-106081	+	TSC_hg19_v1_chr20_-_47894629 BC030789 NM_021035	-106580	-	BC110572 BC110573 NM_004975	97926	-	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	183436	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	328977	-	BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC042807|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##CR936805|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC030789|ZNFX1|57169|zinc finger, NFX1-type containing 1##NM_021035|ZNFX1|57169|zinc finger, NFX1-type containing 1##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.981038	CTCF.p2:-19:0.981
chr3	140641625	140641744	reg1029648.p2	4.935	+	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	-244725	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-987432	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-987666	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	19083	+	TSC_hg19_v1_chr3_+_140770412 BC051354	128794	+	AF403029 BC008324 NM_080862 AK056367	129073	+	NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.02156	
chr3	53738159	53738277	reg1029478.p2	4.935	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	-209107	+	TSC_hg19_v1_chr3_+_53528709 M76558	-209559	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	-356625	-	TSC_hg19_v1_chr3_-_53880427 NM_018397	142201	-	TSC_hg19_v1_chr3_+_53880576 NM_018725	142354	+	TSC_hg19_v1_chr3_+_53880594 AK307749	142377	+	NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018397|CHDH|55349|choline dehydrogenase##NM_018725|IL17RB|55540|interleukin 17 receptor B##AK307749|IL17RB|55540|interleukin 17 receptor B	0.34256	CTCF.p2:6:0.343
chr5	14957674	14957803	reg1028042.p2	4.935	+	DQ892588 DQ895806 AK222631 AK315012 BC014526 AF274753 AY358503 TSC_hg19_v1_chr5_-_14871888 AL833238 AB046801 BC009835 NM_054027	-85883	-	TSC_hg19_v1_chr5_+_14664826 BC015392	-292897	+	TSC_hg19_v1_chr5_+_14664772 NM_138348	-292962	+	TSC_hg19_v1_chr5_+_15500291 AB020647 NM_012304	542561	+	BC136424 TSC_hg19_v1_chr5_+_15500549	542806	+	BC075061 TSC_hg19_v1_chr5_+_15500760	543010	+	DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)##DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)##AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)##AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)##BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)##AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)##AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)##AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)##BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)##NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)##BC015392|FAM105B|90268|family with sequence similarity 105, member B##NM_138348|FAM105B|90268|family with sequence similarity 105, member B##AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7	0.630037	CTCF.p2:0:0.630
chr10	133040428	133040534	reg1027554.p2	4.934	+	TSC_hg19_v1_chr10_+_131934681 AJ010841 AB463691	-1105766	+	TSC_hg19_v1_chr10_+_131934675 AF118649 AK225609	-1105806	+	TSC_hg19_v1_chr10_+_131934662 NM_001199868 NM_006541 BC005289 AK022131 AF118652	-1105826	+	TSC_hg19_v1_chr10_-_133109808 BC093639 BC101535	69339	-	BC042951 NM_174937 TSC_hg19_v1_chr10_-_133110013	69520	-	CU692440 AB528671 U15174 BC009342 BC080643 TSC_hg19_v1_chr10_-_133795428 AK222626 AK295136 BC021989 AF002697 NM_004052	754895	-	AJ010841|GLRX3|10539|glutaredoxin 3##AF118649|GLRX3|10539|glutaredoxin 3##AK225609|GLRX3|10539|glutaredoxin 3##NM_001199868|GLRX3|10539|glutaredoxin 3##NM_006541|GLRX3|10539|glutaredoxin 3##BC005289|GLRX3|10539|glutaredoxin 3##AK022131|GLRX3|10539|glutaredoxin 3##AF118652|GLRX3|10539|glutaredoxin 3##BC093639|TCERG1L|256536|transcription elongation regulator 1-like##BC101535|TCERG1L|256536|transcription elongation regulator 1-like##BC042951|TCERG1L|256536|transcription elongation regulator 1-like##NM_174937|TCERG1L|256536|transcription elongation regulator 1-like##U15174|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC009342|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC080643|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK222626|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK295136|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC021989|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AF002697|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_004052|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3	0.153191	
chr12	120570969	120571149	reg1023765.p2	4.934	+	TSC_hg19_v1_chr12_+_120554697 BC041995 AK130486	-16350	+	TSC_hg19_v1_chr12_-_120554632 NM_001167606 NM_006861	-16420	-	TSC_hg19_v1_chr12_-_120554558 AK300127	-16494	-	TSC_hg19_v1_chr12_-_120632504 AB587307 AK297271 BC153881 D86973 NM_006836	61429	-	BC019014 BC000087 TSC_hg19_v1_chr12_-_120638906 BC070194	67842	-	AK129754 AK222571 AK304674 BC107717 D28418 TSC_hg19_v1_chr12_-_120638911 AK222468 AK291109	67851	-	NM_001167606|RAB35|11021|RAB35, member RAS oncogene family##NM_006861|RAB35|11021|RAB35, member RAS oncogene family##AK300127|RAB35|11021|RAB35, member RAS oncogene family##AK297271|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##BC153881|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##D86973|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##NM_006836|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##BC019014|RPLP0|6175|ribosomal protein, large, P0##BC000087|RPLP0|6175|ribosomal protein, large, P0##BC070194|RPLP0|6175|ribosomal protein, large, P0##AK129754|RPLP0|6175|ribosomal protein, large, P0##AK222571|RPLP0|6175|ribosomal protein, large, P0##AK304674|RPLP0|6175|ribosomal protein, large, P0##BC107717|RPLP0|6175|ribosomal protein, large, P0##D28418|RPLP0|6175|ribosomal protein, large, P0##AK222468|RPLP0|6175|ribosomal protein, large, P0##AK291109|RPLP0|6175|ribosomal protein, large, P0	0.0	
chr17	855836	856017	reg1026882.p2	4.934	+	BC009327 AK302073 NM_001205319	-88608	-	BC011550 TSC_hg19_v1_chr17_+_685611 BC050614 AK225128 AB590841 CU679954 CU690740	-170312	+	AF177344 NM_018146 TSC_hg19_v1_chr17_+_685592 AK001443 AK222900	-170368	+	TSC_hg19_v1_chr17_-_882986 AB590045 NM_022463	27074	-	TSC_hg19_v1_chr17_+_900368 BC002324 NM_013337 AK000830 AK225453 AF155330	44429	+	TSC_hg19_v1_chr17_-_982210 AK299909	126299	-	BC009327|NXN|64359|nucleoredoxin##AK302073|NXN|64359|nucleoredoxin##NM_001205319|NXN|64359|nucleoredoxin##BC011550|RNMTL1|55178|RNA methyltransferase like 1##BC050614|RNMTL1|55178|RNA methyltransferase like 1##AK225128|RNMTL1|55178|RNA methyltransferase like 1##AF177344|RNMTL1|55178|RNA methyltransferase like 1##NM_018146|RNMTL1|55178|RNA methyltransferase like 1##AK001443|RNMTL1|55178|RNA methyltransferase like 1##AK222900|RNMTL1|55178|RNA methyltransferase like 1##NM_022463|NXN|64359|nucleoredoxin##BC002324|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##NM_013337|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK000830|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK225453|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AF155330|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK299909|ABR|29|active BCR-related gene	0.0	
chr18	10032468	10032600	reg1028034.p1	4.934	+	AF044670 TSC_hg19_v1_chr18_+_9914252 AF057358 AF086627 BT019618	-118272	+	TSC_hg19_v1_chr18_+_9914239 AK292948 AF154847	-118311	+	TSC_hg19_v1_chr18_+_9914032 BC002992	-118493	+	BC053324 TSC_hg19_v1_chr18_+_10454599	422036	+	TSC_hg19_v1_chr18_+_10454623 AB056722 AB104887 NM_153000	422088	+	TSC_hg19_v1_chr18_+_10454634 AK300743	422118	+	AF044670|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AF057358|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AF086627|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##BT019618|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AK292948|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AF154847|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##BC002992|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##BC053324|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AB056722|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AB104887|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##NM_153000|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AK300743|APCDD1|147495|adenomatosis polyposis coli down-regulated 1	0.993651	CTCF.p2:7:0.994
chr5	75441911	75442015	reg1028341.p1	4.934	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-62692	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-428703	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	-433701	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	257153	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	477182	-	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	569993	+	AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor	0.42722	CTCF.p2:-5:0.427
chr5	80809946	80810074	reg1029481.p1	4.934	+	BC075011 BC075010 AK122960 AB078619 BC089437 NM_130767 TSC_hg19_v1_chr5_-_80690052	-120008	-	NM_001131035 NM_001131036 NM_032280 AL512712 TSC_hg19_v1_chr5_+_80597439 BC032736 AK314160 BC022799 BC014841	-212571	+	AK092460 TSC_hg19_v1_chr5_-_80597373 AK096680	-212638	-	TSC_hg19_v1_chr5_-_81046929 AB528651 CU677799 DQ891620 DQ894812 EU176592 EU831646 EU831730 AK293544 AK074537 AK294864 AK297494 AF161465 AF077048 AK299858 AK312337 CR936787 AL080076 BC017020	236889	-	TSC_hg19_v1_chr5_-_81046990 NM_012446	237098	-	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	457835	+	BC075011|ACOT12|134526|acyl-CoA thioesterase 12##BC075010|ACOT12|134526|acyl-CoA thioesterase 12##AK122960|ACOT12|134526|acyl-CoA thioesterase 12##AB078619|ACOT12|134526|acyl-CoA thioesterase 12##BC089437|ACOT12|134526|acyl-CoA thioesterase 12##NM_130767|ACOT12|134526|acyl-CoA thioesterase 12##NM_001131035|ZCCHC9|84240|zinc finger, CCHC domain containing 9##NM_001131036|ZCCHC9|84240|zinc finger, CCHC domain containing 9##NM_032280|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AL512712|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC032736|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AK314160|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC022799|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC014841|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AK092460|LOC100131067|100131067|uncharacterized LOC100131067##AK096680|LOC100131067|100131067|uncharacterized LOC100131067##DQ891620|SSBP2|23635|single-stranded DNA binding protein 2##DQ894812|SSBP2|23635|single-stranded DNA binding protein 2##EU176592|SSBP2|23635|single-stranded DNA binding protein 2##EU831646|SSBP2|23635|single-stranded DNA binding protein 2##EU831730|SSBP2|23635|single-stranded DNA binding protein 2##AK293544|SSBP2|23635|single-stranded DNA binding protein 2##AK074537|SSBP2|23635|single-stranded DNA binding protein 2##AK294864|SSBP2|23635|single-stranded DNA binding protein 2##AK297494|SSBP2|23635|single-stranded DNA binding protein 2##AF161465|SSBP2|23635|single-stranded DNA binding protein 2##AF077048|SSBP2|23635|single-stranded DNA binding protein 2##AK299858|SSBP2|23635|single-stranded DNA binding protein 2##AK312337|SSBP2|23635|single-stranded DNA binding protein 2##CR936787|SSBP2|23635|single-stranded DNA binding protein 2##AL080076|SSBP2|23635|single-stranded DNA binding protein 2##BC017020|SSBP2|23635|single-stranded DNA binding protein 2##NM_012446|SSBP2|23635|single-stranded DNA binding protein 2##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)	0.373922	CTCF.p2:7:0.374
chr6	51952624	51952755	reg1025943.p2	4.934	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	-294	-	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-1166154	+	AY028376 NM_172238	-1271433	+	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	98517	+	AF384857 JF305974 AB590713 BC070124 NM_052872	156572	-	AB528319 DQ893654 DQ895840 TSC_hg19_v1_chr6_-_52149506 AK312928 AK300754 X62153 AY032603	196802	-	AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F##DQ893654|MCM3|4172|minichromosome maintenance complex component 3##DQ895840|MCM3|4172|minichromosome maintenance complex component 3##AK312928|MCM3|4172|minichromosome maintenance complex component 3##AK300754|MCM3|4172|minichromosome maintenance complex component 3##X62153|MCM3|4172|minichromosome maintenance complex component 3##AY032603|MCM3|4172|minichromosome maintenance complex component 3	0.95279	CTCF.p2:-12:0.953
chr10	58229423	58229524	reg1028357.p1	4.933	+	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	-108447	-	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	-108459	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	-870699	+	TSC_hg19_v1_chr10_-_60027655 BC016612 BC065709 NM_152230	1798188	-	BC005962 TSC_hg19_v1_chr10_+_60028929 NM_018464 BC059168 AF220049 BC008474 BC007043 AY960578 AK312017	1799473	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	1865363	+	AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##BC016612|IPMK|253430|inositol polyphosphate multikinase##BC065709|IPMK|253430|inositol polyphosphate multikinase##NM_152230|IPMK|253430|inositol polyphosphate multikinase##BC005962|CISD1|55847|CDGSH iron sulfur domain 1##NM_018464|CISD1|55847|CDGSH iron sulfur domain 1##BC059168|CISD1|55847|CDGSH iron sulfur domain 1##AF220049|CISD1|55847|CDGSH iron sulfur domain 1##BC008474|CISD1|55847|CDGSH iron sulfur domain 1##BC007043|CISD1|55847|CDGSH iron sulfur domain 1##AY960578|CISD1|55847|CDGSH iron sulfur domain 1##AK312017|CISD1|55847|CDGSH iron sulfur domain 1##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1	0.259907	CTCF.p2:-25:0.260
chr15	80602234	80602364	reg1029785.p1	4.933	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-156923	+	TSC_hg19_v1_chr15_+_80445268 D28440 NM_000137 AK313951	-157047	+	TSC_hg19_v1_chr15_+_80445130 AK297965	-157167	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	94435	+	AK295763 TSC_hg19_v1_chr15_+_80733623	131306	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	385363	+	M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##D28440|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##NM_000137|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK313951|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK297965|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1	0.823034	CTCF.p2:21:0.823
chr19	39421120	39421301	reg1013680.p2	4.933	+	NM_001243212 TSC_hg19_v1_chr19_-_39402827	-18398	-	TSC_hg19_v1_chr19_+_39390657 AK057862 AK290569 BC015528 AB463937 DQ890633 DQ893804 CU677339 BT006743	-30492	+	TSC_hg19_v1_chr19_+_39390609 AB209784	-30617	+	TSC_hg19_v1_chr19_-_39421404 AB527892 CU692126 BC042912 AK296152 AK293414 AK000457 AK296170 AB029948 NM_001145901 NM_017827	97	-	NM_033362	137	+	TSC_hg19_v1_chr19_+_39421608 NM_021107 NM_033363 Y11681 BC007499 BC001617	393	+	NM_001243212|LOC643669|643669|uncharacterized LOC643669##AK057862|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##AK290569|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##BC015528|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##DQ890633|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##DQ893804|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##BT006743|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##AB209784|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##BC042912|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK296152|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK293414|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK000457|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK296170|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AB029948|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##NM_001145901|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##NM_017827|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##NM_033362|MRPS12|6183|mitochondrial ribosomal protein S12##NM_021107|MRPS12|6183|mitochondrial ribosomal protein S12##NM_033363|MRPS12|6183|mitochondrial ribosomal protein S12##Y11681|MRPS12|6183|mitochondrial ribosomal protein S12##BC007499|MRPS12|6183|mitochondrial ribosomal protein S12##BC001617|MRPS12|6183|mitochondrial ribosomal protein S12	0.553988	CTCF.p2:-37:0.249	CTCF.p2:-66:0.286
chr19	8643727	8643820	reg1027073.p2	4.933	+	TSC_hg19_v1_chr19_-_8642338 AB290178	-1375	-	TSC_hg19_v1_chr19_-_8642317 AK301166 AK310058 AB210037 AK131106 NM_012335	-1451	-	TSC_hg19_v1_chr19_-_8642306 BC028071	-1472	-	TSC_hg19_v1_chr19_-_8675585 AB209515 NM_030957	31819	-	AY248901 AK292258 BC024028 TSC_hg19_v1_chr19_-_8809146 BC045752 NM_178525	165339	-	BC137046 BC151149 NM_001004699	197579	+	AB290178|MYO1F|4542|myosin IF##AK301166|MYO1F|4542|myosin IF##AB210037|MYO1F|4542|myosin IF##AK131106|MYO1F|4542|myosin IF##NM_012335|MYO1F|4542|myosin IF##BC028071|MYO1F|4542|myosin IF##AB209515|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##NM_030957|ADAMTS10|81794|ADAM metallopeptidase with thrombospondin type 1 motif, 10##AY248901|ACTL9|284382|actin-like 9##AK292258|ACTL9|284382|actin-like 9##BC024028|ACTL9|284382|actin-like 9##BC045752|ACTL9|284382|actin-like 9##NM_178525|ACTL9|284382|actin-like 9##BC137046|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##BC151149|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1##NM_001004699|OR2Z1|284383|olfactory receptor, family 2, subfamily Z, member 1	0.0	
chr2	193055298	193055427	reg1033247.p1	4.933	+	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-343391	-	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	-343624	-	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	-512500	+	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	3952	-	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	4267	-	BC029413 NM_001127257 CR749813	3466213	+	AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10	0.559225	CTCF.p2:1:0.357	CTCF.p2:4:0.202
chr2	233926438	233926543	reg1027450.p1	4.933	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-1374	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-1431	+	BC069151 BC107053 NM_005383	-29109	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	233776	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	233833	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	233867	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.0	
chr3	119041909	119042076	reg1029259.p1	4.933	+	TSC_hg19_v1_chr3_+_119013513 AK293726 BC112163 BC112165 AB384581 HQ258543	-28372	+	TSC_hg19_v1_chr3_+_119013229 AB033030 NM_020754	-28761	+	TSC_hg19_v1_chr3_-_118959726 AK001006 AK301688 AK314425 BX647468 CR749555 NM_003778 NM_212543	-82255	-	TSC_hg19_v1_chr3_-_119182462 BC003192 BC010070 BC021277 AK222950 AK223248 AK001764 NM_018266	140477	-	TSC_hg19_v1_chr3_+_119187809 NM_152305 AY298903 BC030614 AK295984 AK301002 AK315367 AK222937 AF168711 BC048810 AY358581 AK075444 BC011871 CU688946 CU690580	145833	+	NM_016589 TSC_hg19_v1_chr3_+_119217393 AF139077 AL136622 AK026250 AK225954 AF210057 AL390077 AY358633 AL390090 BC012341 AB528090 AM393632 CU680290 CR457158 CR533524	175481	+	AK293726|ARHGAP31|57514|Rho GTPase activating protein 31##BC112163|ARHGAP31|57514|Rho GTPase activating protein 31##BC112165|ARHGAP31|57514|Rho GTPase activating protein 31##HQ258543|ARHGAP31|57514|Rho GTPase activating protein 31##AB033030|ARHGAP31|57514|Rho GTPase activating protein 31##NM_020754|ARHGAP31|57514|Rho GTPase activating protein 31##AK001006|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK301688|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK314425|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BX647468|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##CR749555|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_003778|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_212543|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BC003192|TMEM39A|55254|transmembrane protein 39A##BC010070|TMEM39A|55254|transmembrane protein 39A##BC021277|TMEM39A|55254|transmembrane protein 39A##AK222950|TMEM39A|55254|transmembrane protein 39A##AK223248|TMEM39A|55254|transmembrane protein 39A##AK001764|TMEM39A|55254|transmembrane protein 39A##NM_018266|TMEM39A|55254|transmembrane protein 39A##NM_152305|POGLUT1|56983|protein O-glucosyltransferase 1##AY298903|POGLUT1|56983|protein O-glucosyltransferase 1##BC030614|POGLUT1|56983|protein O-glucosyltransferase 1##AK295984|POGLUT1|56983|protein O-glucosyltransferase 1##AK301002|POGLUT1|56983|protein O-glucosyltransferase 1##AK315367|POGLUT1|56983|protein O-glucosyltransferase 1##AK222937|POGLUT1|56983|protein O-glucosyltransferase 1##AF168711|POGLUT1|56983|protein O-glucosyltransferase 1##BC048810|POGLUT1|56983|protein O-glucosyltransferase 1##AY358581|POGLUT1|56983|protein O-glucosyltransferase 1##AK075444|POGLUT1|56983|protein O-glucosyltransferase 1##NM_016589|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF139077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL136622|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK026250|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK225954|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF210057|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AY358633|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390090|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##BC012341|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AM393632|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR457158|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR533524|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1	0.0	
chr4	2537380	2537555	reg1017009.p2	4.933	+	NM_001185009 BC031935	-66287	+	TSC_hg19_v1_chr4_+_2470846 AK312534 AK309509 U95140	-66591	+	TSC_hg19_v1_chr4_+_2470845 AB000468	-66623	+	AB000459 AB000460 AB000461 NM_003704 BC136646 BC144337 BC144339 BC144340	89706	+	AK026176 NM_001161527	220283	-	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	220596	-	NM_001185009|RNF4|6047|ring finger protein 4##BC031935|RNF4|6047|ring finger protein 4##AK312534|RNF4|6047|ring finger protein 4##AK309509|RNF4|6047|ring finger protein 4##U95140|RNF4|6047|ring finger protein 4##AB000468|RNF4|6047|ring finger protein 4##AB000459|FAM193A|8603|family with sequence similarity 193, member A##AB000460|FAM193A|8603|family with sequence similarity 193, member A##AB000461|FAM193A|8603|family with sequence similarity 193, member A##NM_003704|FAM193A|8603|family with sequence similarity 193, member A##BC136646|FAM193A|8603|family with sequence similarity 193, member A##BC144337|FAM193A|8603|family with sequence similarity 193, member A##BC144339|FAM193A|8603|family with sequence similarity 193, member A##BC144340|FAM193A|8603|family with sequence similarity 193, member A##AK026176|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001161527|TNIP2|79155|TNFAIP3 interacting protein 2##AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2	0.0	
chr8	12079325	12079410	reg1026080.p1	4.933	+	AK309984 BC062615 BC072459 BC098427 BC048297 AK098138 AK308513 AK297741 AK308439 BC085016 NM_001083537 AK291001 AK298940	-27780	-	AY509884 NM_201402	-83099	-	BC110823 NM_001039615	-132521	+	DQ012022 NM_001037804 NM_001195257	96457	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	214476	-	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	214537	-	AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##BC062615|FAM86B1|85002|family with sequence similarity 86, member B1##BC098427|FAM86B1|85002|family with sequence similarity 86, member B1##BC048297|FAM86B1|85002|family with sequence similarity 86, member B1##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##NM_001083537|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##NM_201402|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC110823|ZNF705D|728957|zinc finger protein 705D##NM_001039615|ZNF705D|728957|zinc finger protein 705D##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2	0.0	
chr8	135489137	135489251	reg1028762.p1	4.933	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-905097	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-1179697	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1285864	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	219600	-	TSC_hg19_v1_chr8_-_135725053 AB463359	235885	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	236080	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.09168	
chr9	80730151	80730297	reg1028605.p1	4.933	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-84040	-	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	-466993	-	AK027023 TSC_hg19_v1_chr9_+_79968352	-761876	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	120806	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	181834	+	TSC_hg19_v1_chr9_+_82186879 NM_007005	1456662	+	AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.0	
chr10	43872459	43872550	reg1029214.p1	4.932	+	BC054876 AY358584 NM_001184963 NM_173160	-5414	+	BC022548 NM_145313	-110138	-	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	-238562	+	TSC_hg19_v1_chr10_-_43892200 NM_001098208	19715	-	TSC_hg19_v1_chr10_-_43892677 BC106008	20176	-	TSC_hg19_v1_chr10_-_43892706 NM_001098207	20241	-	BC054876|FXYD4|53828|FXYD domain containing ion transport regulator 4##AY358584|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001184963|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_173160|FXYD4|53828|FXYD domain containing ion transport regulator 4##BC022548|RASGEF1A|221002|RasGEF domain family, member 1A##NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A##AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##BC106008|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_001098207|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F	0.840699	CTCF.p2:4:0.841
chr2	147491786	147491898	reg1024631.p1	4.932	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-2213921	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-2214211	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-2216639	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	1110275	+	TSC_hg19_v1_chr2_+_148602300 AK314124	1110493	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	1110803	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.716265	CTCF.p2:-15:0.716
chr2	187323888	187324010	reg1029079.p2	4.931	+	NM_173651	-720595	+	BC136602 TSC_hg19_v1_chr2_+_185463544	-1860457	+	BC142612 TSC_hg19_v1_chr2_+_185463319	-1860644	+	TSC_hg19_v1_chr2_+_187350986 AF220184 NM_018471 AK298615 AK001901 AK297658 AF289586	26981	+	TSC_hg19_v1_chr2_+_187351010 BC012336 AF161421 AF109366	27061	+	TSC_hg19_v1_chr2_+_187351051 BC021102 EU176353 AB587394 CU676824	27121	+	NM_173651|FSIP2|401024|fibrous sheath interacting protein 2##BC136602|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A##AF220184|ZC3H15|55854|zinc finger CCCH-type containing 15##NM_018471|ZC3H15|55854|zinc finger CCCH-type containing 15##AK298615|ZC3H15|55854|zinc finger CCCH-type containing 15##AK001901|ZC3H15|55854|zinc finger CCCH-type containing 15##AK297658|ZC3H15|55854|zinc finger CCCH-type containing 15##AF289586|ZC3H15|55854|zinc finger CCCH-type containing 15##BC012336|ZC3H15|55854|zinc finger CCCH-type containing 15##AF161421|ZC3H15|55854|zinc finger CCCH-type containing 15##AF109366|ZC3H15|55854|zinc finger CCCH-type containing 15##BC021102|ZC3H15|55854|zinc finger CCCH-type containing 15##EU176353|ZC3H15|55854|zinc finger CCCH-type containing 15	0.181255	
chr5	57183843	57183938	reg1029085.p2	4.931	+	BC137470 BC137473 BX648504 NM_001017992	-405296	-	NM_001127236 AL136844 AB463051 AM392551 AM393442	-673962	+	BC113004 NM_001127235	-712617	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	572046	-	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	603404	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	695029	+	BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family	0.0	
chr20	12947262	12947370	reg1032052.p1	4.930	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-1048759	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	-1075867	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-2292747	-	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	42325	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	255107	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	672248	-	AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1	0.853408	CTCF.p2:8:0.853
chr8	145501712	145501819	reg1031540.p1	4.930	+	AX721087 NM_001008271 NM_001080514	-11190	+	BC003035 BC009915 NM_016458 AK098226 BC015471	-63862	+	AX721087 NM_001008271 NM_001080514	-180276	+	BC007274 TSC_hg19_v1_chr8_-_145515060 DQ896815 EU176248	13272	-	BC017674 TSC_hg19_v1_chr8_-_145515087 AK290677 BC013787 BC013980 AK315612	13314	-	TSC_hg19_v1_chr8_-_145515096 AK024840	13327	-	NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##BC007274|BOP1|23246|block of proliferation 1##DQ896815|BOP1|23246|block of proliferation 1##EU176248|BOP1|23246|block of proliferation 1##BC017674|BOP1|23246|block of proliferation 1##AK290677|BOP1|23246|block of proliferation 1##BC013787|BOP1|23246|block of proliferation 1##BC013980|BOP1|23246|block of proliferation 1##AK315612|BOP1|23246|block of proliferation 1##AK024840|BOP1|23246|block of proliferation 1	0.99554	CTCF.p2:-23:0.996
chr8	28861951	28862107	reg1029192.p1	4.930	+	TSC_hg19_v1_chr8_+_28748135 AY522342 DQ269478 BC069242 NM_024567	-113902	+	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	-114112	+	NM_001145159 NM_018250	-114332	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	258585	-	AL137704 NM_057158	344292	-	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	346041	-	AY522342|HMBOX1|79618|homeobox containing 1##DQ269478|HMBOX1|79618|homeobox containing 1##BC069242|HMBOX1|79618|homeobox containing 1##NM_024567|HMBOX1|79618|homeobox containing 1##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4	0.901574	CTCF.p2:-13:0.902
chr17	29233241	29233341	reg1029882.p1	4.929	+	CU692922 TSC_hg19_v1_chr17_-_29233257 AJ314645 AK026382 AK225474 BC024328 AK298495 NM_024683	-40	-	TSC_hg19_v1_chr17_+_29158987 AL832103 BC015051 AJ314648 AY557611 NM_024857	-74306	+	TSC_hg19_v1_chr17_-_29151725 AK313315 NM_015986	-81528	-	AK074196 AJ238994 AJ242782 NM_018404 TSC_hg19_v1_chr17_+_29248960 AK074204 AK222526 AJ272195 BC033758 DQ288859	15541	+	NM_001184992 NM_032322 NM_197939 TSC_hg19_v1_chr17_+_29298040 BC126420 BC126422 BC144143 AJ496729 BC005084	64707	+	TSC_hg19_v1_chr17_+_29298062 AK226030 BC082262 AK312979 AK122646 AK122709 AB470605 AY598332	64849	+	AJ314645|C17orf42|79736|chromosome 17 open reading frame 42##AK026382|C17orf42|79736|chromosome 17 open reading frame 42##AK225474|C17orf42|79736|chromosome 17 open reading frame 42##BC024328|C17orf42|79736|chromosome 17 open reading frame 42##AK298495|C17orf42|79736|chromosome 17 open reading frame 42##NM_024683|C17orf42|79736|chromosome 17 open reading frame 42##AL832103|ATAD5|79915|ATPase family, AAA domain containing 5##BC015051|ATAD5|79915|ATPase family, AAA domain containing 5##AJ314648|ATAD5|79915|ATPase family, AAA domain containing 5##AY557611|ATAD5|79915|ATPase family, AAA domain containing 5##NM_024857|ATAD5|79915|ATPase family, AAA domain containing 5##AK313315|CRLF3|51379|cytokine receptor-like factor 3##NM_015986|CRLF3|51379|cytokine receptor-like factor 3##AK074196|ADAP2|55803|ArfGAP with dual PH domains 2##AJ238994|ADAP2|55803|ArfGAP with dual PH domains 2##AJ242782|ADAP2|55803|ArfGAP with dual PH domains 2##NM_018404|ADAP2|55803|ArfGAP with dual PH domains 2##AK074204|ADAP2|55803|ArfGAP with dual PH domains 2##AK222526|ADAP2|55803|ArfGAP with dual PH domains 2##AJ272195|ADAP2|55803|ArfGAP with dual PH domains 2##BC033758|ADAP2|55803|ArfGAP with dual PH domains 2##DQ288859|ADAP2|55803|ArfGAP with dual PH domains 2##NM_001184992|RNF135|84282|ring finger protein 135##NM_032322|RNF135|84282|ring finger protein 135##NM_197939|RNF135|84282|ring finger protein 135##BC126420|RNF135|84282|ring finger protein 135##BC126422|RNF135|84282|ring finger protein 135##BC144143|RNF135|84282|ring finger protein 135##AJ496729|RNF135|84282|ring finger protein 135##BC005084|RNF135|84282|ring finger protein 135##AK226030|RNF135|84282|ring finger protein 135##BC082262|RNF135|84282|ring finger protein 135##AK312979|RNF135|84282|ring finger protein 135##AK122646|RNF135|84282|ring finger protein 135##AK122709|RNF135|84282|ring finger protein 135##AB470605|RNF135|84282|ring finger protein 135##AY598332|RNF135|84282|ring finger protein 135	0.0	
chr17	57863799	57863979	reg1021903.p1	4.929	+	TSC_hg19_v1_chr17_+_57785080 AK293664	-78816	+	AK294854 TSC_hg19_v1_chr17_+_57785025 AF214006 AX775965	-78854	+	BC009758 TSC_hg19_v1_chr17_+_57785014 AK024969	-78873	+	TSC_hg19_v1_chr17_+_57915291 AK310806	51417	+	AK024096 AK298492 AK301312 BC000258 AK022771 AK315172 NM_001193609 NM_001193610 NM_001193611 NM_001193612 NM_001193613 NM_016261	106302	-	NM_003161 BC036033 TSC_hg19_v1_chr17_+_57970481 AK293247	106573	+	AK293664|VMP1|81671|vacuole membrane protein 1##AK294854|VMP1|81671|vacuole membrane protein 1##AF214006|VMP1|81671|vacuole membrane protein 1##AX775965|VMP1|81671|vacuole membrane protein 1##BC009758|VMP1|81671|vacuole membrane protein 1##AK024969|VMP1|81671|vacuole membrane protein 1##AK024096|TUBD1|51174|tubulin, delta 1##AK298492|TUBD1|51174|tubulin, delta 1##AK301312|TUBD1|51174|tubulin, delta 1##BC000258|TUBD1|51174|tubulin, delta 1##AK022771|TUBD1|51174|tubulin, delta 1##AK315172|TUBD1|51174|tubulin, delta 1##NM_001193609|TUBD1|51174|tubulin, delta 1##NM_001193610|TUBD1|51174|tubulin, delta 1##NM_001193611|TUBD1|51174|tubulin, delta 1##NM_001193612|TUBD1|51174|tubulin, delta 1##NM_001193613|TUBD1|51174|tubulin, delta 1##NM_016261|TUBD1|51174|tubulin, delta 1##NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	0.0	
chr2	103456510	103456616	reg1024866.p1	4.929	+	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	-77981	+	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	-103181	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	-103230	-	TSC_hg19_v1_chr2_-_105467912 AK096498	2011353	-	TSC_hg19_v1_chr2_+_105471877 NM_006236	2015335	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	2197951	+	CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182##AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##NM_006236|POU3F3|5455|POU class 3 homeobox 3##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9	0.981399	CTCF.p2:10:0.981
chr9	36407556	36407670	reg1007296.p2	4.929	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-6438	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-6716	-	AL136817 BC033786 NM_022781 NM_194329	-7360	-	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	165311	+	TSC_hg19_v1_chr9_-_37034361 NM_016734	626803	-	TSC_hg19_v1_chr9_+_37079908 AK091718	672293	+	NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##AL136817|RNF38|152006|ring finger protein 38##BC033786|RNF38|152006|ring finger protein 38##NM_022781|RNF38|152006|ring finger protein 38##NM_194329|RNF38|152006|ring finger protein 38##AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.015033	
chr1	42123736	42123837	reg1028837.p1	4.928	+	BC034393 X55177 M65199 NM_001956	-173467	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-415950	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-416001	-	TSC_hg19_v1_chr1_-_42384357 BC040942	260556	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	260587	-	TSC_hg19_v1_chr1_-_42501606 BC046120	377843	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.125715	
chr4	57442137	57442255	reg1027661.p1	4.928	+	AY439003 NM_206919	-70822	+	TSC_hg19_v1_chr4_+_57333798 BC040134 BX537991 AF038851 BC046143 BC065018 AF069765 BC032609 AK225430 AK307397 AB590681 AF077019	-108406	+	TSC_hg19_v1_chr4_+_57333762 NM_006947 BC017057 BC056901 BC105583	-108435	+	AB019573 AB463756 AM393649 DQ892193 EU176669 TSC_hg19_v1_chr4_-_57522247	79961	-	BC014225 AB059410 TSC_hg19_v1_chr4_-_57522645 AF492680 AF492681 NM_001145459 NM_139211	80382	-	AF492675 NM_001145460 NM_032495 NM_139212	105662	-	AY439003|ARL9|132946|ADP-ribosylation factor-like 9##NM_206919|ARL9|132946|ADP-ribosylation factor-like 9##BC040134|SRP72|6731|signal recognition particle 72kDa##BX537991|SRP72|6731|signal recognition particle 72kDa##AF038851|SRP72|6731|signal recognition particle 72kDa##BC046143|SRP72|6731|signal recognition particle 72kDa##BC065018|SRP72|6731|signal recognition particle 72kDa##AF069765|SRP72|6731|signal recognition particle 72kDa##BC032609|SRP72|6731|signal recognition particle 72kDa##AK225430|SRP72|6731|signal recognition particle 72kDa##AK307397|SRP72|6731|signal recognition particle 72kDa##AF077019|SRP72|6731|signal recognition particle 72kDa##NM_006947|SRP72|6731|signal recognition particle 72kDa##BC017057|SRP72|6731|signal recognition particle 72kDa##BC056901|SRP72|6731|signal recognition particle 72kDa##BC105583|SRP72|6731|signal recognition particle 72kDa##AB019573|HOPX|84525|HOP homeobox##AM393649|HOPX|84525|HOP homeobox##DQ892193|HOPX|84525|HOP homeobox##EU176669|HOPX|84525|HOP homeobox##BC014225|HOPX|84525|HOP homeobox##AB059410|HOPX|84525|HOP homeobox##AF492680|HOPX|84525|HOP homeobox##AF492681|HOPX|84525|HOP homeobox##NM_001145459|HOPX|84525|HOP homeobox##NM_139211|HOPX|84525|HOP homeobox##AF492675|HOPX|84525|HOP homeobox##NM_001145460|HOPX|84525|HOP homeobox##NM_032495|HOPX|84525|HOP homeobox##NM_139212|HOPX|84525|HOP homeobox	0.545318	CTCF.p2:-4:0.545
chr7	75039529	75039646	reg1022376.p2	4.928	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	-14622	+	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	-51017	+	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	-172067	-	AK126486 TSC_hg19_v1_chr7_+_75039644 BC044928 BC103750	67	+	AB354586 TSC_hg19_v1_chr7_-_75072021	32424	-	TSC_hg19_v1_chr7_-_75115568 BC082993 NM_001099415	75982	-	AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC044928|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC103750|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AB354586|POM121C|100101267|POM121 membrane glycoprotein C##BC082993|POM121C|100101267|POM121 membrane glycoprotein C##NM_001099415|POM121C|100101267|POM121 membrane glycoprotein C	0.0	
chr7	95348249	95348368	reg1029604.p1	4.928	+	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	-122445	-	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-233015	+	TSC_hg19_v1_chr7_-_95064341 AB102891 CU692318 AB591009 L48513 BC040010 AF001602 AF001601 BC073739 AK296029 BC093006 BC046160 AK291103 AK308065 AK315209 AK296636 BC009728 NM_000305 NM_001018161 AK301313	-283947	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	53600	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	603094	-	BC140736 BC171740 AK124274 NM_001201450 NM_001201451	784519	-	BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##AB102891|PON2|5445|paraoxonase 2##L48513|PON2|5445|paraoxonase 2##BC040010|PON2|5445|paraoxonase 2##AF001602|PON2|5445|paraoxonase 2##AF001601|PON2|5445|paraoxonase 2##AK296029|PON2|5445|paraoxonase 2##BC093006|PON2|5445|paraoxonase 2##BC046160|PON2|5445|paraoxonase 2##AK291103|PON2|5445|paraoxonase 2##AK308065|PON2|5445|paraoxonase 2##AK315209|PON2|5445|paraoxonase 2##AK296636|PON2|5445|paraoxonase 2##BC009728|PON2|5445|paraoxonase 2##NM_000305|PON2|5445|paraoxonase 2##NM_001018161|PON2|5445|paraoxonase 2##AK301313|PON2|5445|paraoxonase 2##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC140736|FLJ42280|401388|putative uncharacterized protein FLJ42280##BC171740|FLJ42280|401388|putative uncharacterized protein FLJ42280##AK124274|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201450|FLJ42280|401388|putative uncharacterized protein FLJ42280##NM_001201451|FLJ42280|401388|putative uncharacterized protein FLJ42280	0.0	
chr12	12161992	12162132	reg1025457.p2	4.927	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-359076	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-359288	+	TSC_hg19_v1_chr12_+_11802659 AK289441	-359389	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	61821	+	AF281254 AF281255 NM_030766 NM_138722	62339	+	AK074543 TSC_hg19_v1_chr12_-_12291395	129322	-	U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AK289441|ETV6|2120|ets variant 6##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6	0.013858	
chr19	48613694	48613860	reg1025313.p1	4.927	+	HQ258076 BC126133 BC126135 AF169159 NM_019855	-66532	-	AF279147 NM_022142 BC015598	-115852	+	AB590993 DQ227497 NM_001128326	-118395	-	AF058921 BC017956 AK022440 TSC_hg19_v1_chr19_-_48614075 AF065214 BC063416 AK314524 AK295400 NM_001159322 NM_001159323 NM_003706	283	-	M36067 NM_000234 TSC_hg19_v1_chr19_-_48673602 AK314210 AK297296 AK303644 AB208791 AK225863 AK300370	59804	-	TSC_hg19_v1_chr19_+_48673949 BC043386	60176	+	HQ258076|CABP5|56344|calcium binding protein 5##BC126133|CABP5|56344|calcium binding protein 5##BC126135|CABP5|56344|calcium binding protein 5##AF169159|CABP5|56344|calcium binding protein 5##NM_019855|CABP5|56344|calcium binding protein 5##AF279147|ELSPBP1|64100|epididymal sperm binding protein 1##NM_022142|ELSPBP1|64100|epididymal sperm binding protein 1##BC015598|ELSPBP1|64100|epididymal sperm binding protein 1##DQ227497|BSPH1|100131137|binder of sperm protein homolog 1##NM_001128326|BSPH1|100131137|binder of sperm protein homolog 1##AF058921|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC017956|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK022440|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AF065214|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC063416|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK314524|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK295400|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159322|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159323|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_003706|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##M36067|LIG1|3978|ligase I, DNA, ATP-dependent##NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent##AK314210|LIG1|3978|ligase I, DNA, ATP-dependent##AK297296|LIG1|3978|ligase I, DNA, ATP-dependent##AK303644|LIG1|3978|ligase I, DNA, ATP-dependent##AB208791|LIG1|3978|ligase I, DNA, ATP-dependent##AK225863|LIG1|3978|ligase I, DNA, ATP-dependent##AK300370|LIG1|3978|ligase I, DNA, ATP-dependent##BC043386|C19orf68|374920|chromosome 19 open reading frame 68	0.0	
chr2	169568648	169568784	reg1026877.p1	4.927	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	-255841	+	TSC_hg19_v1_chr2_+_169312764 AK172775	-255957	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	-464643	-	AK093444 AX748130 NM_001171631	74332	+	NM_001039724 NM_001171632 BC014189 NM_052946 AK002203 AK290254 BC093072 AJ532842 DQ402497	90411	+	TSC_hg19_v1_chr2_-_169746945 AF225416 BC022255 NM_020675 AK291093	178225	-	NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6##AK172775|CERS6|253782|ceramide synthase 6##BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##AK093444|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171631|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001039724|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171632|NOSTRIN|115677|nitric oxide synthase trafficker##BC014189|NOSTRIN|115677|nitric oxide synthase trafficker##NM_052946|NOSTRIN|115677|nitric oxide synthase trafficker##AK002203|NOSTRIN|115677|nitric oxide synthase trafficker##AK290254|NOSTRIN|115677|nitric oxide synthase trafficker##BC093072|NOSTRIN|115677|nitric oxide synthase trafficker##AJ532842|NOSTRIN|115677|nitric oxide synthase trafficker##DQ402497|NOSTRIN|115677|nitric oxide synthase trafficker##AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	0.0	
chr6	117938275	117938456	reg1031096.p2	4.927	+	TSC_hg19_v1_chr6_-_117923706 NM_001017408 NM_020399	-14651	-	TSC_hg19_v1_chr6_-_117923682 AF450008	-14679	-	TSC_hg19_v1_chr6_-_117923675 AK314486	-14692	-	TSC_hg19_v1_chr6_-_117996469 AK125564	58073	-	NM_138459 BC066910 TSC_hg19_v1_chr6_+_117996631	58259	+	TSC_hg19_v1_chr6_+_117996651 BC150654 BC150655 AK125119	58282	+	NM_001017408|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##NM_020399|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AF450008|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AK314486|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##NM_138459|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC066910|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150654|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150655|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##AK125119|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	0.0	
chr7	66843439	66843620	reg1006454.p2	4.927	+	TSC_hg19_v1_chr7_+_66767656 BC026058	-75872	+	TSC_hg19_v1_chr7_+_66767642 AK307290	-75881	+	TSC_hg19_v1_chr7_+_66767639 AK023257 AK308931	-75921	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	2220307	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	2220800	+	TSC_hg19_v1_chr7_+_69064580 BC011643	2221059	+	BC026058|STAG3L4|64940|stromal antigen 3-like 4##AK307290|STAG3L4|64940|stromal antigen 3-like 4##AK023257|STAG3L4|64940|stromal antigen 3-like 4##AK308931|STAG3L4|64940|stromal antigen 3-like 4##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2	0.0	
chr1	26611513	26611693	reg1003128.p1	4.926	+	TSC_hg19_v1_chr1_+_26606633 DQ893377 DQ896698	-4972	+	TSC_hg19_v1_chr1_+_26606589 AK024884 AF304163	-5005	+	TSC_hg19_v1_chr1_+_26606583 AJ297915	-5022	+	AY007163 TSC_hg19_v1_chr1_-_26633128 AF521018 AK291503 AF520989 AF521017 AK090792 AX746618 AK293910 CR749413 AK094198 AK296179 BX647774 BX648412 BC038106 AK093258 AX748018 NM_001077262 NM_183008	21549	-	TSC_hg19_v1_chr1_+_26644396 NM_001803 AK311554	32797	+	TSC_hg19_v1_chr1_+_26644458 BC000644 X62466 X67699 BT007116 CR456874	32880	+	DQ893377|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##DQ896698|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AK024884|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AF304163|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AJ297915|SH3BGRL3|83442|SH3 domain binding glutamic acid-rich protein like 3##AY007163|UBXN11|91544|UBX domain protein 11##AF521018|UBXN11|91544|UBX domain protein 11##AK291503|UBXN11|91544|UBX domain protein 11##AF520989|UBXN11|91544|UBX domain protein 11##AF521017|UBXN11|91544|UBX domain protein 11##AK090792|UBXN11|91544|UBX domain protein 11##AK293910|UBXN11|91544|UBX domain protein 11##CR749413|UBXN11|91544|UBX domain protein 11##AK094198|UBXN11|91544|UBX domain protein 11##AK296179|UBXN11|91544|UBX domain protein 11##BX647774|UBXN11|91544|UBX domain protein 11##BX648412|UBXN11|91544|UBX domain protein 11##BC038106|UBXN11|91544|UBX domain protein 11##AK093258|UBXN11|91544|UBX domain protein 11##NM_001077262|UBXN11|91544|UBX domain protein 11##NM_183008|UBXN11|91544|UBX domain protein 11##NM_001803|CD52|1043|CD52 molecule##BC000644|CD52|1043|CD52 molecule##X62466|CD52|1043|CD52 molecule##X67699|CD52|1043|CD52 molecule##BT007116|CD52|1043|CD52 molecule##CR456874|CD52|1043|CD52 molecule	0.0	
chr20	62644209	62644389	reg1022807.p6	4.926	+	TSC_hg19_v1_chr20_+_62612576 AB527848	-31713	+	AF221842 TSC_hg19_v1_chr20_+_62612506 AF026031 AK314310 AB019219 BC001666	-31768	+	TSC_hg19_v1_chr20_+_62612487 AK225993 AK001554	-31822	+	AJ243896 AF270652 BC111390 NM_018419 BC035513 BC038590 BC073971 TSC_hg19_v1_chr20_-_62680993 AB033888	36639	-	NM_198723	44139	+	NM_003195	49710	+	AF221842|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF026031|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK314310|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AB019219|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##BC001666|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK225993|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK001554|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AJ243896|SOX18|54345|SRY (sex determining region Y)-box 18##AF270652|SOX18|54345|SRY (sex determining region Y)-box 18##BC111390|SOX18|54345|SRY (sex determining region Y)-box 18##NM_018419|SOX18|54345|SRY (sex determining region Y)-box 18##BC035513|SOX18|54345|SRY (sex determining region Y)-box 18##BC038590|SOX18|54345|SRY (sex determining region Y)-box 18##BC073971|SOX18|54345|SRY (sex determining region Y)-box 18##AB033888|SOX18|54345|SRY (sex determining region Y)-box 18##NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2	0.0	
chr4	107160138	107160260	reg1032618.p1	4.926	+	TSC_hg19_v1_chr4_+_106816634 AK290029 AK304721 AL832465 BC131587	-343509	+	TSC_hg19_v1_chr4_+_106816593 AK295772 NM_001033047 NM_001184690 NM_001184691 NM_001184692 NM_001184693 AK302477 AK304279 AY358336	-343598	+	AK292355 BC032942 NM_001031720	-528232	+	NM_001142415 AK297950 AK095951 NM_004757	76610	+	TSC_hg19_v1_chr4_-_107237383 BC068496 AK315571 BX647851 BC009208 NM_001163435 NM_001163437 NM_033115	77186	-	AK303965 NM_001142416 TSC_hg19_v1_chr4_+_107237695	77480	+	AK290029|NPNT|255743|nephronectin##AK304721|NPNT|255743|nephronectin##AL832465|NPNT|255743|nephronectin##BC131587|NPNT|255743|nephronectin##AK295772|NPNT|255743|nephronectin##NM_001033047|NPNT|255743|nephronectin##NM_001184690|NPNT|255743|nephronectin##NM_001184691|NPNT|255743|nephronectin##NM_001184692|NPNT|255743|nephronectin##NM_001184693|NPNT|255743|nephronectin##AK302477|NPNT|255743|nephronectin##AK304279|NPNT|255743|nephronectin##AY358336|NPNT|255743|nephronectin##AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001142415|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##AK297950|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##AK095951|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_004757|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##BC068496|TBCK|93627|TBC1 domain containing kinase##AK315571|TBCK|93627|TBC1 domain containing kinase##BX647851|TBCK|93627|TBC1 domain containing kinase##BC009208|TBCK|93627|TBC1 domain containing kinase##NM_001163435|TBCK|93627|TBC1 domain containing kinase##NM_001163437|TBCK|93627|TBC1 domain containing kinase##NM_033115|TBCK|93627|TBC1 domain containing kinase##AK303965|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_001142416|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	0.869342	CTCF.p2:-15:0.846
chr5	23742975	23743068	reg1026674.p2	4.926	+	DQ388610 NM_020227 AK301776	-235278	+	L33477 NM_004061	-889291	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-889575	-	NM_006727	902063	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	3295650	-	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	3729382	+	DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401	0.865292	CTCF.p2:-5:0.865
chr10	61998353	61998472	reg1029988.p2	4.925	+	AK292927 AK092527 NM_001149	-97696	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-332088	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	-332211	-	U13616 NM_020987	151148	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	334278	-	EU832293 EU832377 AK172736 BX537917 TSC_hg19_v1_chr10_-_62493273 BX648574	494765	-	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##S72869|CCDC6|8030|coiled-coil domain containing 6##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832293|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832377|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX537917|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX648574|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.0	
chr11	65769574	65769745	reg1028221.p1	4.925	+	AK094129 TSC_hg19_v1_chr11_-_65769629 BC005131 AK311891 NM_001242481 NM_001242482 NM_001242483 NM_001242484 NM_001242485 NM_001242486 NM_032325	-29	-	TSC_hg19_v1_chr11_+_65769409 AF068235 NM_001143985 NM_003860	-180	+	NM_005146 TSC_hg19_v1_chr11_+_65729203 AK223016 AK293200 AK297589 AK309104 AK298184 BC001058 AB006198 AF353625 DQ891694 EU176645 BT006637 Y14314	-40390	+	TSC_hg19_v1_chr11_+_65769774 BC107702	160	+	TSC_hg19_v1_chr11_+_65769954 AF044773	261	+	TSC_hg19_v1_chr11_+_65769973 BC005942 AK311961 BC008705	465	+	AK094129|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##BC005131|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##AK311891|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242481|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242482|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242483|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242484|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242485|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242486|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_032325|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##AF068235|BANF1|8815|barrier to autointegration factor 1##NM_001143985|BANF1|8815|barrier to autointegration factor 1##NM_003860|BANF1|8815|barrier to autointegration factor 1##NM_005146|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK223016|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK293200|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK297589|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK298184|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BC001058|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AB006198|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AF353625|SART1|9092|squamous cell carcinoma antigen recognized by T cells##DQ891694|SART1|9092|squamous cell carcinoma antigen recognized by T cells##EU176645|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BT006637|SART1|9092|squamous cell carcinoma antigen recognized by T cells##Y14314|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BC107702|BANF1|8815|barrier to autointegration factor 1##AF044773|BANF1|8815|barrier to autointegration factor 1##BC005942|BANF1|8815|barrier to autointegration factor 1##AK311961|BANF1|8815|barrier to autointegration factor 1##BC008705|BANF1|8815|barrier to autointegration factor 1	0.0	
chr1	33577722	33577823	reg1029928.p1	4.925	+	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	-31039	+	TSC_hg19_v1_chr1_-_33502485 NM_001199199 NM_001625 NM_013411	-75272	-	AB005622 TSC_hg19_v1_chr1_-_33502470	-75297	-	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	69876	-	TSC_hg19_v1_chr1_+_33722167 NM_152493	144393	+	TSC_hg19_v1_chr1_-_33813262 AK055807	235524	-	BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##NM_001199199|AK2|204|adenylate kinase 2##NM_001625|AK2|204|adenylate kinase 2##NM_013411|AK2|204|adenylate kinase 2##AB005622|AK2|204|adenylate kinase 2##AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##NM_152493|ZNF362|149076|zinc finger protein 362	0.059218	
chr19	44252098	44252276	reg1025332.p2	4.925	+	BC033853 NM_019612 BC066939	-31962	+	NM_001005376 NM_001005377 NM_002659	-77690	-	AF257789 CR456952 AB464026 DQ893017 DQ896262 M83246 TSC_hg19_v1_chr19_-_44174320 AK290774 AY029180 X51675 X74039 BC002788	-77884	-	TSC_hg19_v1_chr19_-_44259063 AK309830 BC008869 AL136606	6833	-	TSC_hg19_v1_chr19_-_44259074 AK022948	6906	-	TSC_hg19_v1_chr19_-_44259117 NM_019108	6941	-	BC033853|IRGC|56269|immunity-related GTPase family, cinema##NM_019612|IRGC|56269|immunity-related GTPase family, cinema##BC066939|IRGC|56269|immunity-related GTPase family, cinema##NM_001005376|PLAUR|5329|plasminogen activator, urokinase receptor##NM_001005377|PLAUR|5329|plasminogen activator, urokinase receptor##NM_002659|PLAUR|5329|plasminogen activator, urokinase receptor##AF257789|PLAUR|5329|plasminogen activator, urokinase receptor##CR456952|PLAUR|5329|plasminogen activator, urokinase receptor##DQ893017|PLAUR|5329|plasminogen activator, urokinase receptor##DQ896262|PLAUR|5329|plasminogen activator, urokinase receptor##M83246|PLAUR|5329|plasminogen activator, urokinase receptor##AK290774|PLAUR|5329|plasminogen activator, urokinase receptor##AY029180|PLAUR|5329|plasminogen activator, urokinase receptor##X51675|PLAUR|5329|plasminogen activator, urokinase receptor##X74039|PLAUR|5329|plasminogen activator, urokinase receptor##BC002788|PLAUR|5329|plasminogen activator, urokinase receptor##AK309830|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC008869|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL136606|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK022948|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_019108|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.047589	
chr2	102673813	102673917	reg1024171.p1	4.925	+	BC027733 BC012346 NM_173343	-58408	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	-65502	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	-165333	+	TSC_hg19_v1_chr2_+_102759205 X16896	85367	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	96555	+	AF284434 NM_003854 U49065 BC107064	129583	+	BC027733|IL1R2|7850|interleukin 1 receptor, type II##BC012346|IL1R2|7850|interleukin 1 receptor, type II##NM_173343|IL1R2|7850|interleukin 1 receptor, type II##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##X16896|IL1R1|3554|interleukin 1 receptor, type I##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2	0.0	
chr5	132138118	132138218	reg1028833.p1	4.925	+	AF440763 NM_001098813 TSC_hg19_v1_chr5_-_132113705	-24581	-	TSC_hg19_v1_chr5_-_132112954 BC140759 BC171779 AK057797 AF179995 AF440761 AF440762 D86957 NM_001098811 NM_001098812 NM_015146	-25164	-	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	-55024	+	TSC_hg19_v1_chr5_+_132149022 NM_175873	10859	+	BC104914 BC104916 BC143494 AF314142 NM_133456	23764	-	DQ655971 TSC_hg19_v1_chr5_-_132166340 BC040980	28136	-	AF440763|SEPT8|23176|septin 8##NM_001098813|SEPT8|23176|septin 8##BC140759|SEPT8|23176|septin 8##BC171779|SEPT8|23176|septin 8##AK057797|SEPT8|23176|septin 8##AF179995|SEPT8|23176|septin 8##AF440761|SEPT8|23176|septin 8##AF440762|SEPT8|23176|septin 8##D86957|SEPT8|23176|septin 8##NM_001098811|SEPT8|23176|septin 8##NM_001098812|SEPT8|23176|septin 8##NM_015146|SEPT8|23176|septin 8##AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2##NM_175873|ANKRD43|134548|ankyrin repeat domain 43##BC104914|SHROOM1|134549|shroom family member 1##BC104916|SHROOM1|134549|shroom family member 1##BC143494|SHROOM1|134549|shroom family member 1##AF314142|SHROOM1|134549|shroom family member 1##NM_133456|SHROOM1|134549|shroom family member 1	0.602724	CTCF.p2:8:0.603
chr6	159125587	159125767	reg1000371.p2	4.925	+	TSC_hg19_v1_chr6_+_159071070 NM_001009991 NM_001242384 NM_001242394 NM_001242395 AK092729 AK298712 AX747692 BC085612	-54623	+	AB590427 CR456931 DQ892606 DQ892607 DQ895846 DQ895847 EU862237 U56255 TSC_hg19_v1_chr6_-_159065772 D50663 BC105588 BC029412 AK315601 NM_006519	-59903	-	BC033450 TSC_hg19_v1_chr6_+_158957752	-167975	+	J05021 X51521 TSC_hg19_v1_chr6_-_159239246	113545	-	TSC_hg19_v1_chr6_-_159239264 BC013903 AK299456 BC068458	113582	-	TSC_hg19_v1_chr6_-_159239276 NM_003379	113628	-	NM_001009991|SYTL3|94120|synaptotagmin-like 3##NM_001242384|SYTL3|94120|synaptotagmin-like 3##NM_001242394|SYTL3|94120|synaptotagmin-like 3##NM_001242395|SYTL3|94120|synaptotagmin-like 3##AK092729|SYTL3|94120|synaptotagmin-like 3##AK298712|SYTL3|94120|synaptotagmin-like 3##BC085612|SYTL3|94120|synaptotagmin-like 3##CR456931|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892606|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892607|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895846|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895847|DYNLT1|6993|dynein, light chain, Tctex-type 1##EU862237|DYNLT1|6993|dynein, light chain, Tctex-type 1##U56255|DYNLT1|6993|dynein, light chain, Tctex-type 1##D50663|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC105588|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC029412|DYNLT1|6993|dynein, light chain, Tctex-type 1##AK315601|DYNLT1|6993|dynein, light chain, Tctex-type 1##NM_006519|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC033450|TMEM181|57583|transmembrane protein 181##J05021|EZR|7430|ezrin##X51521|EZR|7430|ezrin##BC013903|EZR|7430|ezrin##AK299456|EZR|7430|ezrin##BC068458|EZR|7430|ezrin##NM_003379|EZR|7430|ezrin	0.0	
chrX	105658661	105658783	reg1030018.p2	4.925	+	BC031229 NM_001171020 NM_152423	-246425	+	TSC_hg19_v1_chrX_-_105282719 AK310778 NM_000354	-375993	-	TSC_hg19_v1_chrX_+_105066559 AK131549	-592156	+	NM_001184782 NM_018015 TSC_hg19_v1_chrX_+_105855208 BC047503 AK001040 BC070110 AK291730 BC011483 BC033709 BC054032 CU687040 CU689708	196512	+	BC036901 NM_024539 AK126553	278353	+	TSC_hg19_v1_chrX_+_105969932 AK074264 NM_194463 BC063404 AF394689 CU687692	311286	+	BC031229|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_001171020|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_152423|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##AK131549|NRK|203447|Nik related kinase##NM_001184782|CXorf57|55086|chromosome X open reading frame 57##NM_018015|CXorf57|55086|chromosome X open reading frame 57##BC047503|CXorf57|55086|chromosome X open reading frame 57##AK001040|CXorf57|55086|chromosome X open reading frame 57##BC070110|CXorf57|55086|chromosome X open reading frame 57##AK291730|CXorf57|55086|chromosome X open reading frame 57##BC011483|CXorf57|55086|chromosome X open reading frame 57##BC033709|CXorf57|55086|chromosome X open reading frame 57##BC054032|CXorf57|55086|chromosome X open reading frame 57##BC036901|RNF128|79589|ring finger protein 128##NM_024539|RNF128|79589|ring finger protein 128##AK126553|RNF128|79589|ring finger protein 128##AK074264|RNF128|79589|ring finger protein 128##NM_194463|RNF128|79589|ring finger protein 128##BC063404|RNF128|79589|ring finger protein 128##AF394689|RNF128|79589|ring finger protein 128	0.062609	
chr11	124272377	124272465	reg1026537.p1	4.924	+	NM_001005467	-5175	-	NM_001005468	-19183	-	AF162668 NM_001002918 BC137043 BC137045	-82284	-	NM_001005196 BC136865 BC136866	22356	-	AF238488 HQ258145 NM_012378 BC130393 BC130419	38595	-	NM_001005195 BC136863 BC136864	141140	-	NM_001005467|OR8B3|390271|olfactory receptor, family 8, subfamily B, member 3##NM_001005468|OR8B2|26595|olfactory receptor, family 8, subfamily B, member 2##AF162668|OR8D2|283160|olfactory receptor, family 8, subfamily D, member 2##NM_001002918|OR8D2|283160|olfactory receptor, family 8, subfamily D, member 2##BC137043|OR8D2|283160|olfactory receptor, family 8, subfamily D, member 2##BC137045|OR8D2|283160|olfactory receptor, family 8, subfamily D, member 2##NM_001005196|OR8B4|283162|olfactory receptor, family 8, subfamily B, member 4##BC136865|OR8B4|283162|olfactory receptor, family 8, subfamily B, member 4##BC136866|OR8B4|283162|olfactory receptor, family 8, subfamily B, member 4##AF238488|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##HQ258145|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##NM_012378|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##BC130393|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##BC130419|OR8B8|26493|olfactory receptor, family 8, subfamily B, member 8##NM_001005195|OR8B12|219858|olfactory receptor, family 8, subfamily B, member 12##BC136863|OR8B12|219858|olfactory receptor, family 8, subfamily B, member 12##BC136864|OR8B12|219858|olfactory receptor, family 8, subfamily B, member 12	0.990162	CTCF.p2:-17:0.990
chr1	213459741	213459839	reg1029386.p1	4.924	+	TSC_hg19_v1_chr1_+_213224716 AB070706 EF491805	-235030	+	TSC_hg19_v1_chr1_+_213224692 BC104769 BC143449 BC143473 BC143474	-235113	+	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	-235203	+	AK298182 TSC_hg19_v1_chr1_+_214161296 U44060	701499	+	BC024201 NM_002763	702069	+	TSC_hg19_v1_chr1_+_214454550 BC068511 BC049367 BC094747 BC057793 NM_020197 AF226053 BC098133 BC098276 BC098305 BC098335 BC028104 AK313868 AB590916 BC039890	994647	+	AB070706|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC104769|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143449|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143473|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143474|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK298182|PROX1|5629|prospero homeobox 1##U44060|PROX1|5629|prospero homeobox 1##BC024201|PROX1|5629|prospero homeobox 1##NM_002763|PROX1|5629|prospero homeobox 1##BC068511|SMYD2|56950|SET and MYND domain containing 2##BC049367|SMYD2|56950|SET and MYND domain containing 2##BC094747|SMYD2|56950|SET and MYND domain containing 2##BC057793|SMYD2|56950|SET and MYND domain containing 2##NM_020197|SMYD2|56950|SET and MYND domain containing 2##AF226053|SMYD2|56950|SET and MYND domain containing 2##BC098133|SMYD2|56950|SET and MYND domain containing 2##BC098276|SMYD2|56950|SET and MYND domain containing 2##BC098305|SMYD2|56950|SET and MYND domain containing 2##BC098335|SMYD2|56950|SET and MYND domain containing 2##BC028104|SMYD2|56950|SET and MYND domain containing 2##AK313868|SMYD2|56950|SET and MYND domain containing 2##BC039890|SMYD2|56950|SET and MYND domain containing 2	0.535582	CTCF.p2:-11:0.536
chr15	32893819	32893954	reg1028812.p1	4.924	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-571143	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-730943	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-731057	-	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	13876	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	40028	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	116371	+	AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1	0.864445	CTCF.p2:-1:0.836
chr16	50769701	50769881	reg1021013.p1	4.924	+	AF178930 AY187243 NM_022162 AY187244 AY187246 AB527390	-38690	+	TSC_hg19_v1_chr16_-_50715246 NM_001144972 NM_153337 NM_182854	-54490	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	-54614	-	NM_001042355 NM_015247 TSC_hg19_v1_chr16_+_50775996 AK292975 AK225202 AJ250014 AK310832 AK056226	6193	+	TSC_hg19_v1_chr16_+_50776066 AF161542 NM_001042412 BC012342	6267	+	AK307835 NM_001127892	414716	-	AF178930|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187243|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_022162|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187244|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187246|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_001144972|SNX20|124460|sorting nexin 20##NM_153337|SNX20|124460|sorting nexin 20##NM_182854|SNX20|124460|sorting nexin 20##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20##NM_001042355|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_015247|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK292975|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK225202|CYLD|1540|cylindromatosis (turban tumor syndrome)##AJ250014|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK310832|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK056226|CYLD|1540|cylindromatosis (turban tumor syndrome)##AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)##BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)##AK307835|SALL1|6299|sal-like 1 (Drosophila)##NM_001127892|SALL1|6299|sal-like 1 (Drosophila)	0.0	
chr8	145051344	145051484	reg1027339.p1	4.924	+	TSC_hg19_v1_chr8_-_145050917 U53204 NM_000445	-487	-	AY480045 NM_201378 TSC_hg19_v1_chr8_-_145047698	-3745	-	TSC_hg19_v1_chr8_-_145028003 AY480046 NM_201379	-23383	-	AK303317 TSC_hg19_v1_chr8_-_145060590 AK128537 BC132961 BC136542 BC144235	9163	-	AK027370 TSC_hg19_v1_chr8_-_145060609 AK309251 BC030549 BC020378 AK222914 AK308657 NM_032789	9200	-	BC035485 TSC_hg19_v1_chr8_-_145064214	12761	-	U53204|PLEC|5339|plectin##NM_000445|PLEC|5339|plectin##AY480045|PLEC|5339|plectin##NM_201378|PLEC|5339|plectin##AY480046|PLEC|5339|plectin##NM_201379|PLEC|5339|plectin##AK303317|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK128537|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC132961|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC136542|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC144235|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK027370|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK309251|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC030549|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC020378|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK222914|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK308657|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##NM_032789|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC035485|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	0.985206	CTCF.p2:29:0.985
chr12	45567235	45567360	reg1032604.p1	4.923	+	AK131230 NM_001004329 TSC_hg19_v1_chr12_-_45444883	-122415	-	AK295125 NM_001145110	-259587	-	AK299733 NM_001145107	-296665	-	TSC_hg19_v1_chr12_+_45609769 AK126409 NM_001025356 NM_001142679 NM_001204803 AK310641	42487	+	TSC_hg19_v1_chr12_+_45609845 AK303996	42552	+	TSC_hg19_v1_chr12_+_45609867 AK302819 NM_001142680	42574	+	AK131230|DBX2|440097|developing brain homeobox 2##NM_001004329|DBX2|440097|developing brain homeobox 2##AK295125|NELL2|4753|NEL-like 2 (chicken)##NM_001145110|NELL2|4753|NEL-like 2 (chicken)##AK299733|NELL2|4753|NEL-like 2 (chicken)##NM_001145107|NELL2|4753|NEL-like 2 (chicken)##AK126409|ANO6|196527|anoctamin 6##NM_001025356|ANO6|196527|anoctamin 6##NM_001142679|ANO6|196527|anoctamin 6##NM_001204803|ANO6|196527|anoctamin 6##AK310641|ANO6|196527|anoctamin 6##AK303996|ANO6|196527|anoctamin 6##AK302819|ANO6|196527|anoctamin 6##NM_001142680|ANO6|196527|anoctamin 6	0.573684	CTCF.p2:-15:0.558
chrX	86919514	86919619	reg1029210.p1	4.923	+	NM_019117 NM_057162 AK056457 AB051474 BC161675 AL832514 AF284765 AF284766 BC140839 BC140840 BC142652 BC146677 AB385497	-146761	+	AK055953 AK298787 NM_001139515	-1401596	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	-1516101	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	1082674	+	BC117398 BC117400 NM_138960 BC101144 BC101145 AF497480 BC029920 AB464725 HQ258115	2257445	+	NM_080832	3770030	+	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)##NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)##AK056457|KLHL4|56062|kelch-like 4 (Drosophila)##AB051474|KLHL4|56062|kelch-like 4 (Drosophila)##BC161675|KLHL4|56062|kelch-like 4 (Drosophila)##AL832514|KLHL4|56062|kelch-like 4 (Drosophila)##AF284765|KLHL4|56062|kelch-like 4 (Drosophila)##AF284766|KLHL4|56062|kelch-like 4 (Drosophila)##BC140839|KLHL4|56062|kelch-like 4 (Drosophila)##BC140840|KLHL4|56062|kelch-like 4 (Drosophila)##BC142652|KLHL4|56062|kelch-like 4 (Drosophila)##BC146677|KLHL4|56062|kelch-like 4 (Drosophila)##AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1##BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_080832|PABPC5|140886|poly(A) binding protein, cytoplasmic 5	0.308125	CTCF.p2:17:0.308
chr1	120765460	120765561	reg1027222.p1	4.922	+	TSC_hg19_v1_chr1_-_120612318 NM_001200001 NM_024408	-153195	-	TSC_hg19_v1_chr1_-_120612272 BC071562	-153244	-	TSC_hg19_v1_chr1_-_120612211 AK307843	-153304	-	NM_001100910	73494	+	L03419 L03420 TSC_hg19_v1_chr1_-_120935918 BC110416 AK308886	170399	-	AK291502 AK307244 AK311502 NM_001004340 NM_001017986 NM_001244910 TSC_hg19_v1_chr1_-_120935945	170442	-	NM_001200001|NOTCH2|4853|notch 2##NM_024408|NOTCH2|4853|notch 2##BC071562|NOTCH2|4853|notch 2##AK307843|NOTCH2|4853|notch 2##NM_001100910|FAM72B|653820|family with sequence similarity 72, member B##L03419|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##L03420|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##BC110416|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK308886|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK291502|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK307244|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK311502|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001004340|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001017986|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001244910|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)	0.029568	
chr1	32230935	32231059	reg1032101.p1	4.922	+	AB005298 NM_001703	-1356	-	TSC_hg19_v1_chr1_-_32169619 NM_001856	-61304	-	M92642 TSC_hg19_v1_chr1_-_32169608	-61415	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	33243	-	TSC_hg19_v1_chr1_-_32264318 AK095829	33324	-	BC114430 AK131447 NM_144569 AK091016 AX746730	50602	-	AB005298|BAI2|576|brain-specific angiogenesis inhibitor 2##NM_001703|BAI2|576|brain-specific angiogenesis inhibitor 2##NM_001856|COL16A1|1307|collagen, type XVI, alpha 1##M92642|COL16A1|1307|collagen, type XVI, alpha 1##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1##BC114430|SPOCD1|90853|SPOC domain containing 1##AK131447|SPOCD1|90853|SPOC domain containing 1##NM_144569|SPOCD1|90853|SPOC domain containing 1##AK091016|SPOCD1|90853|SPOC domain containing 1	0.971996	CTCF.p2:-19:0.972
chr6	3383885	3384066	reg1027489.p2	4.922	+	TSC_hg19_v1_chr6_-_3272352 BC090851 BC022217	-111545	-	TSC_hg19_v1_chr6_+_3259232 AK126623 AK095683	-124736	+	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	-124817	+	BC128580 BC128581 BC038748 NM_021945	61232	-	TSC_hg19_v1_chr6_-_3456513 AL110245	72539	-	BC040876 NM_015482	72788	-	BC090851|SLC22A23|63027|solute carrier family 22, member 23##BC022217|SLC22A23|63027|solute carrier family 22, member 23##AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##BC128580|SLC22A23|63027|solute carrier family 22, member 23##BC128581|SLC22A23|63027|solute carrier family 22, member 23##BC038748|SLC22A23|63027|solute carrier family 22, member 23##NM_021945|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23	0.0	
chr6	83073291	83073432	reg1027766.p1	4.922	+	AK291170 NM_006670	-439	+	TSC_hg19_v1_chr6_-_82957441 NM_015525 DQ005633 DQ005634	-115893	-	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	-115948	-	TSC_hg19_v1_chr6_+_83073565 BC037161 AK074786	172	+	TSC_hg19_v1_chr6_+_83073996 AK074790 NM_001166392	616	+	TSC_hg19_v1_chr6_-_83775541 BC101512 BC101538 BC143617 BC036049 AB126062 NM_198920 BC053645 AK298205 BC057845	702164	-	AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein##NM_015525|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005633|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005634|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC037161|TPBG|7162|trophoblast glycoprotein##AK074786|TPBG|7162|trophoblast glycoprotein##AK074790|TPBG|7162|trophoblast glycoprotein##NM_001166392|TPBG|7162|trophoblast glycoprotein##BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein	0.650941	CTCF.p2:0:0.622
chr7	103087726	103087830	reg1031543.p1	4.922	+	TSC_hg19_v1_chr7_-_103086511 AF523354 AY256823 AY256824 AY256825 AK126898 NM_001167962 NM_198999 NM_206883 NM_206884 NM_206885	-1211	-	NM_001204453 NM_002803 TSC_hg19_v1_chr7_+_102988118 D11094 AK298821 AB075520 AK312648 AK298529 BC002589 AB527557 CU678056 EU446703	-99714	+	BC125057 BC139751 BC046351 X98260 TSC_hg19_v1_chr7_-_102985295 BC012376 BC062703 BC056682 BC032854 NM_001129887 NM_014377	-102585	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	542218	-	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	760653	-	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	881440	+	AF523354|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256823|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256824|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256825|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AK126898|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_001167962|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_198999|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206883|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206884|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206885|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_001204453|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##NM_002803|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##D11094|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK298821|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AB075520|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK312648|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK298529|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##BC002589|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##EU446703|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##BC125057|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC139751|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC046351|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##X98260|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC012376|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC062703|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC056682|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC032854|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_001129887|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_014377|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	0.0	
chr7	140143953	140144053	reg1025501.p2	4.922	+	NM_001008749	-40161	+	AL136583 AL136583 TSC_hg19_v1_chr7_-_140098295 AK299276 BC028380 BC028380 BC046567 BC046567 AK296543 AK300265 AK074823 AK074823 NM_032295 NM_207113	-45704	-	TSC_hg19_v1_chr7_+_139877154 AK026372	-266847	+	TSC_hg19_v1_chr7_-_140179165 AB209298 AB527778 DQ892404 EU176516 BC064838 AM236048 BC037400 BC051821 BC012398 AK297361 AK315552	35159	-	TSC_hg19_v1_chr7_-_140179306 AF192784 AL136812 AF117233 BC025955	35267	-	TSC_hg19_v1_chr7_-_140179348 NM_001145125 NM_013446	35347	-	NM_001008749|RAB19|401409|RAB19, member RAS oncogene family##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK299276|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK296543|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK300265|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_032295|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_207113|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK026372|LOC100134229|100134229|uncharacterized LOC100134229##AB209298|MKRN1|23608|makorin ring finger protein 1##DQ892404|MKRN1|23608|makorin ring finger protein 1##EU176516|MKRN1|23608|makorin ring finger protein 1##BC064838|MKRN1|23608|makorin ring finger protein 1##AM236048|MKRN1|23608|makorin ring finger protein 1##BC037400|MKRN1|23608|makorin ring finger protein 1##BC051821|MKRN1|23608|makorin ring finger protein 1##BC012398|MKRN1|23608|makorin ring finger protein 1##AK297361|MKRN1|23608|makorin ring finger protein 1##AK315552|MKRN1|23608|makorin ring finger protein 1##AF192784|MKRN1|23608|makorin ring finger protein 1##AL136812|MKRN1|23608|makorin ring finger protein 1##AF117233|MKRN1|23608|makorin ring finger protein 1##BC025955|MKRN1|23608|makorin ring finger protein 1##NM_001145125|MKRN1|23608|makorin ring finger protein 1##NM_013446|MKRN1|23608|makorin ring finger protein 1	0.991896	CTCF.p2:5:0.992
chr9	117135435	117135610	reg1025454.p1	4.922	+	BC042202 TSC_hg19_v1_chr9_-_117111294	-24233	-	NM_000608 AK312226 BC015964 BC056239 AK303760 CR456930 CU677539	-43396	+	NM_000607 X02544 AK316207 AK312035 BC026238 BC007032 BC104818 BC104820 BC143313 BC143314 M13692 AB463987 BT019790 CU693168	-50165	+	AY703041 AY703042 AK131082 AK160382 TSC_hg19_v1_chr9_-_117150263 AB075848	14768	-	AY703040 BC055285 NM_030767	21162	-	AY703039 AK126136 TSC_hg19_v1_chr9_-_117160753	25229	-	BC042202|AKNA|80709|AT-hook transcription factor##NM_000608|ORM2|5005|orosomucoid 2##AK312226|ORM2|5005|orosomucoid 2##BC015964|ORM2|5005|orosomucoid 2##BC056239|ORM2|5005|orosomucoid 2##AK303760|ORM2|5005|orosomucoid 2##CR456930|ORM2|5005|orosomucoid 2##NM_000607|ORM1|5004|orosomucoid 1##X02544|ORM1|5004|orosomucoid 1##AK316207|ORM1|5004|orosomucoid 1##AK312035|ORM1|5004|orosomucoid 1##BC026238|ORM1|5004|orosomucoid 1##BC007032|ORM1|5004|orosomucoid 1##BC104818|ORM1|5004|orosomucoid 1##BC104820|ORM1|5004|orosomucoid 1##BC143313|ORM1|5004|orosomucoid 1##BC143314|ORM1|5004|orosomucoid 1##M13692|ORM1|5004|orosomucoid 1##BT019790|ORM1|5004|orosomucoid 1##AY703041|AKNA|80709|AT-hook transcription factor##AY703042|AKNA|80709|AT-hook transcription factor##AK131082|AKNA|80709|AT-hook transcription factor##AK160382|AKNA|80709|AT-hook transcription factor##AB075848|AKNA|80709|AT-hook transcription factor##AY703040|AKNA|80709|AT-hook transcription factor##BC055285|AKNA|80709|AT-hook transcription factor##NM_030767|AKNA|80709|AT-hook transcription factor##AY703039|AKNA|80709|AT-hook transcription factor##AK126136|AKNA|80709|AT-hook transcription factor	0.0448	
chr9	127048766	127048946	reg1022352.p3	4.922	+	TSC_hg19_v1_chr9_+_127020588 AL832574	-28266	+	TSC_hg19_v1_chr9_+_127020519 NM_001166168 AK313071	-28333	+	TSC_hg19_v1_chr9_+_127020255 AB026289	-28592	+	TSC_hg19_v1_chr9_+_127054267 NM_001166170 NM_001166171	5403	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	5776	+	TSC_hg19_v1_chr9_+_127119114 BC042968	70313	+	NM_001166168|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AK313071|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166170|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166171|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr14	106815587	106815732	reg1027978.p2	4.921	+	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 AF044420 AF044422 AF044425 AF044427 AF044442 AF090355 AF099201 AF174074 AF471431 AJ132850 AJ271549 AJ300787 AJ300793 AJ300798 AJ300803 AJ308463 AJ633622 AJ633623 AY028777 AY033265 AY033266 AY033267 AY530317 AY554176 AY640472 AY640475 AY640477 AY640483 AY640501 AY640511 AY640535 AY640539 AY640541 AY640544 AY640549 AY640550 AY640557 AY640558 AY640561 AY640568 AY640569 AY640573 AY640577 AY685306 AY781859 AY846266 AY846267 AY866744 AY941844 AY941856 AY941857 AY941860 AY941863 AY941865 AY941866 AY941868 AY941892 AY941896 AY941898 AY941901 AY941907 AY941913 AY941935 AY941942 AY941950 AY941953 AY941968 AY941970 AY941982 AY941983 AY941985 AY941986 AY941988 AY941989 AY944708 AY944716 AY971015 AY971027 AY971037 AY971078 AY971081 AY971115 AY971120 AY971130 AY971135 DQ065629 DQ065669 DQ065674 DQ065689 DQ065692 DQ065718 DQ065725 DQ431499 DQ431621 DQ431627 DQ840705 DQ840715 DQ840744 DQ926087 DQ926091 DQ926150 DQ926207 DQ926222 DQ926372 DQ926388 DQ926512 DQ926569 DQ926578 DQ926634 EF177978 EF178004 EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 AY866854 AY882579 AY927661 AY941847 AY941848 AY941861 AY941864 AY941867 AY941869 AY941871 AY941872 AY941874 AY941875 AY941893 AY941894 AY941895 AY941897 AY941904 AY941908 AY941922 AY941932 AY941933 AY941934 AY941944 AY941946 AY941951 AY941954 AY941956 AY941963 AY941964 AY941966 AY941967 AY941969 AY944690 AY971127 D83678 D83681 D83684 D83685 D83694 DQ005284 DQ065696 DQ100659 DQ100685 DQ100775 DQ100819 DQ100846 DQ100857 DQ100907 DQ100930 DQ212508 DQ212509 DQ431475 DQ431476 DQ431501 DQ431573 DQ431575 DQ431576 DQ431580 DQ431582 DQ431606 DQ431607 DQ431622 DQ431628 DQ431633 DQ431634 DQ431637 DQ431642 DQ431643 DQ431646 DQ431653 DQ431658 DQ535263 DQ535266 DQ535268 DQ535293 DQ535308 DQ535373 DQ535382 DQ535397 DQ535424 DQ535426 DQ535429 DQ535437 DQ535439 DQ535440 DQ535461 DQ535466 DQ840703 DQ840706 DQ840712 DQ840713 DQ840745 DQ840782 DQ840813 DQ923052 DQ926032 DQ926064 DQ926133 DQ926340 DQ926374 DQ926384 DQ926552 EF177969 EF177975 EF177991 EF178015 EF178075 EF178091 EF178098 EF178099 EF221755 EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	-24365	-	U32154 AF460767 DQ524080 DQ454738 Y08403 HM774396 AF103161 AJ245070 AY866645 AM233757 AY670731 DQ005273 AB063909 AB363132 AJ556745 AY670715 AY670719 AY670726 AY670727 AY670745 AY670770 AY670773 AY670784 AY670819 AY670831 AY670837 AY670857 AY671081 AY671102 AY671324 AY671379 AY671400 AY671500 AY671586 AY671639 AY671641 AY671703 AY671775 AY671785 AY781815 AY781827 AY866636 DQ065711 DQ926028 DQ926188 DQ926206 FJ492934 AJ430733 EF178114 FJ385294 HM152518 AY392953 L28053 AY671012 AY671034 AY671045 AY671152 AY671174 AY671714 AY671721 L03677 Z75396 Z75404 L23570 BC073765 AK130813 AK301332 AK130585 AK128579 AK128568 AK129620 TSC_hg19_v1_chr14_-_106781004	-34889	-	AJ305231 DQ118259 HM774835 DQ926094 AY866678 EU794438 Z80845 BC087841 TSC_hg19_v1_chr14_-_106774560	-41224	-	AF460708 AF460709 AF460785 AY003807 AY003817 DQ454548 M33859 M33860 DQ454427 DQ454852 DQ454425 DQ454627 DQ454856 GU552743 DQ454416 DQ454458 GQ232904 GU552731 GU552736 AY003787 AF017463 GU552721 GU552724 GU552725 GU552726 GU552727 GU552728 GU552729 GU552730 AY003850 DQ454418 DQ454671 GQ232774 DQ454432 DQ454433 DQ454901 DQ454979 DQ454980 GQ232865 HM995239 JF810276 AY003855 DQ454422 DQ454434 DQ454622 DQ454870 DQ523887 HM116153 HM116169 HM116182 Z30552 Z30557 Z30561 Z30562 Z30573 Z30576 Z30578 Z30580 Z30581 Z30591 Z30599 Z30674 Z30675 Z30677 DQ454531 DQ454860 DQ454903 EU099089 AF004937 AY003796 AY003804 DQ454392 DQ454610 DQ454833 EU620002 FJ840008 FJ840011 FJ840012 FJ840020 FJ840055 FJ874002 FJ874054 FJ874065 FJ874072 FJ874075 FJ874095 HM116113 HM116114 HM116155 HM116159 HM116160 HM116168 HM116177 HM116195 HM116199 HM116226 AF017459 AF017460 EU619988 AJ487490 AY003825 AJ253061 EU350428 DQ454982 X75022 EF091922 EF175396 EF175402 EF407849 EF441754 GU358660 JF810277 GQ232847 GQ232867 GQ232891 GQ232893 GQ232895 GQ232896 GQ232900 GQ232901 GQ232902 DQ454645 EU099068 EU099071 AF103299 EU090244 EU099076 EU099098 HQ392881 HQ392885 HQ392917 AJ253080 EU099079 EU099096 EU099156 EU099191 EU099252 AJ253066 AM183974 AM183975 AM183976 AM183977 AM183978 AM183995 AF484411 AF103180 AJ253083 AF103278 EF624236 AJ240558 AJ253067 S79918 AJ253059 AJ253072 AJ253074 AJ253079 AJ253081 AJ253082 AJ253084 AJ253087 AJ253088 AJ253089 AJ253090 AJ253091 AJ253092 AJ253093 AJ253094 AJ253095 AJ253098 AJ253102 AJ253103 AJ253104 AJ253108 AJ253109 AJ253110 AJ253112 AJ240555 AJ240556 AJ240557 AJ240560 AJ240561 AJ240566 AJ240574 AJ240575 AJ240576 AJ240577 AJ240580 AJ240581 AJ240590 AJ240595 AJ240604 AJ253044 AJ253050 AJ253054 AJ253077 AJ253085 AY671386 HM996508 Y17927 Y17928 Y17930 Y17931 Y17932 Y17933 Y17934 Y17943 Y17944 Y17945 Y17947 Y17948 Y17949 AY998719 DQ100788 DQ100796 JN110760 JN110800 JN110847 FJ385331 FJ385337 FJ385351 FJ385378 HM774705 HM774878 AF103173 AY193818 EU146315 EU146358 EU146377 EU146394 U21257 U21267 U21268 HM774736 AJ222555 HM995235 X87438 AJ222547 AJ222548 AJ222549 AJ222550 AJ222552 AJ222556 AJ222557 AJ222558 AJ222559 AJ222560 AJ222561 AJ222562 AJ222563 AJ222564 AJ222565 AJ222566 AJ222567 AJ222568 AJ222569 AJ222570 AJ222571 AJ222573 AJ222574 AJ222575 AJ222576 AJ222577 AJ222578 Z46300 Z46301 Z46302 Z46315 Z46316 Z46317 Z46318 Z46319 Z46320 Z46321 Z46322 Z46323 Z46324 Z46325 Z46326 Z46327 Z46328 Z46329 Z46330 Z46331 Z46332 Z46333 Z46334 Z46335 Z46336 Z46337 Z46338 Z46339 Z49139 AJ244942 AJ579251 X64156 X64159 AB063716 AJ244940 AJ279524 AJ279537 AJ556751 AJ579178 AY268371 DQ523935 DQ523975 DQ523980 DQ523984 DQ523987 DQ523990 DQ524003 DQ524006 DQ524007 DQ524018 DQ524044 DQ524065 DQ524068 DQ524074 DQ524077 AB067135 AB067136 AJ244997 AM233792 AM233793 AM233795 AM233801 DQ926349 DQ926350 L34163 X64235 AJ300804 AY670741 AY670790 AY670791 AY670810 AY670816 HM994959 HM995182 HM995183 HM995184 HM995185 HM995187 HM995189 HM995203 HM995204 HM995205 HM995206 HM995207 HM995211 HM995216 HM995244 HM995246 HM995249 HM995308 HM995310 HM995472 HM995477 HM995479 HM995481 HM995550 HM995553 HM995554 HM995743 HM995982 HM996230 HM996238 HM996535 AB063661 AB063671 AB063674 AB066914 AB066915 AB066916 AB066917 AB066918 AB066919 AB066920 AB066921 AB066923 AB066924 AB067034 AB067035 AB067036 AB067037 AB067038 AB067039 AB067040 AB067041 AB067044 AB067046 AB067049 AB067052 AB067053 AB067054 AB067055 AB067056 AB067057 AB067058 AB067059 AB067060 AB067064 AB067066 AB067067 AB067068 AB067084 AB067085 AB067088 AB067089 AB067090 AB067091 AB067092 AB067093 AB067132 AB067133 AB067134 AB067137 AB067142 AB067143 AB067144 AB067145 AB067146 AB067148 AB067149 AB067151 AB110646 AB363152 AB363153 AB363154 AF021948 AF021957 AF021990 AF021991 AF021997 AF022004 AF022005 AF052527 AF062104 AF062113 AF062231 AF062234 AF107233 AF107239 AF107241 AF174041 AF174049 AF174054 AF174085 AF174086 AF174088 AF245309 AF262072 AF262097 AF262100 AF262125 AF262174 AF372845 AJ239335 AJ239362 AJ239377 AJ244929 AJ244931 AJ244935 AJ244937 AJ244938 AJ244939 AJ244941 AJ244943 AJ244944 AJ244951 AJ244959 AJ244960 AJ244962 AJ244966 AJ244967 AJ244968 AJ244969 AJ244972 AJ244973 AJ244975 AJ244978 AJ244982 AJ244984 AJ244985 AJ244987 AJ244988 AJ244990 AJ244991 AJ244992 AJ244994 AJ245008 AJ245009 AJ245011 AJ245013 AJ245017 AJ245028 AJ245035 AJ245036 AJ245039 AJ245040 AJ245041 AJ245042 AJ245043 AJ245044 AJ245046 AJ245049 AJ245051 AJ245052 AJ245054 AJ245057 AJ245065 AJ245236 AJ245238 AJ249631 AJ279513 AJ279519 AJ279521 AJ279526 AJ279531 AJ279535 AJ556773 AJ574778 AJ579118 AJ579121 AJ579122 AJ579124 AJ579129 AJ579135 AJ579164 AJ579165 AJ579167 AJ579175 AJ579176 AJ579201 AJ579206 AJ579208 AJ579211 AJ579213 AJ579240 AJ579241 AJ579242 AJ579243 AJ579246 AJ579248 AJ579249 AJ579250 AJ579253 AJ579255 AJ579256 AJ579257 AJ579258 AJ579259 AJ579260 AJ579286 AJ579287 AJ579289 AJ579290 AJ579302 AJ579304 AY033257 AY062304 AY553641 AY553646 AY670708 AY670709 AY670710 AY670711 AY670716 AY670717 AY670718 AY670720 AY670721 AY670722 AY670723 AY670724 AY670730 AY670736 AY670738 AY670739 AY670743 AY670749 AY670750 AY670755 AY670757 AY670760 AY670761 AY670763 AY670766 AY670767 AY670768 AY670772 AY670775 AY670777 AY670779 AY670781 AY670782 AY670785 AY670787 AY670789 AY670794 AY670795 AY670796 AY670798 AY670801 AY670803 AY670804 AY670811 AY670813 AY670814 AY670815 AY670824 AY670826 AY670827 AY670828 AY670833 AY670834 AY670835 AY670838 AY670839 AY670840 AY670841 AY670842 AY670843 AY670845 AY670846 AY670851 AY670853 AY670855 AY670856 AY670860 AY670863 AY670864 AY670867 AY670870 AY670871 AY670873 AY670875 AY670878 AY670879 AY670882 AY670883 AY670884 AY670885 AY670890 AY670892 AY670893 AY670898 AY670899 AY670900 AY670903 AY670904 AY670905 AY670907 AY670911 AY670913 AY670916 AY670918 AY670919 AY670924 AY670928 AY670929 AY670931 AY670932 AY670935 AY670940 AY670943 AY670944 AY670946 AY670949 AY670952 AY670953 AY670954 AY670962 AY670965 AY670973 AY670974 AY670975 AY670976 AY670977 AY670981 AY670990 AY671010 AY671015 AY671024 AY671047 AY671065 AY671073 AY671078 AY671079 AY671087 AY671093 AY671094 AY671095 AY671096 AY671097 AY671099 AY671100 AY671103 AY671104 AY671105 AY671106 AY671107 AY671108 AY671110 AY671113 AY671115 AY671117 AY671118 AY671120 AY671121 AY671122 AY671123 AY671125 AY671128 AY671129 AY671132 AY671134 AY671135 AY671139 AY671145 AY671153 AY671155 AY671161 AY671209 AY671240 AY671245 AY671257 AY671274 AY671277 AY671283 AY671313 AY671314 AY671315 AY671316 AY671317 AY671319 AY671321 AY671322 AY671323 AY671328 AY671330 AY671332 AY671341 AY671345 AY671347 AY671348 AY671349 AY671354 AY671364 AY671366 AY671370 AY671371 AY671380 AY671382 AY671383 AY671393 AY671409 AY671413 AY671416 AY671422 AY671424 AY671425 AY671427 AY671428 AY671429 AY671430 AY671434 AY671435 AY671436 AY671438 AY671441 AY671443 AY671444 AY671445 AY671446 AY671447 AY671449 AY671452 AY671453 AY671454 AY671455 AY671461 AY671462 AY671464 AY671468 AY671471 AY671478 AY671480 AY671481 AY671483 AY671486 AY671487 AY671491 AY671492 AY671503 AY671505 AY671507 AY671508 AY671510 AY671511 AY671515 AY671518 AY671519 AY671525 AY671527 AY671528 AY671530 AY671532 AY671535 AY671538 AY671539 AY671540 AY671541 AY671543 AY671544 AY671548 AY671555 AY671556 AY671561 AY671564 AY671565 AY671566 AY671568 AY671573 AY671574 AY671577 AY671579 AY671580 AY671581 AY671585 AY671587 AY671591 AY671593 AY671595 AY671612 AY671614 AY671617 AY671619 AY671620 AY671625 AY671629 AY671630 AY671632 AY671634 AY671637 AY671640 AY671642 AY671644 AY671648 AY671650 AY671651 AY671653 AY671658 AY671659 AY671660 AY671663 AY671668 AY671671 AY671676 AY671682 AY671684 AY671685 AY671688 AY671690 AY671691 AY671694 AY671697 AY671698 AY671699 AY671700 AY671702 AY671704 AY671706 AY671707 AY671708 AY671712 AY671716 AY671718 AY671724 AY671732 AY671733 AY671734 AY671735 AY671737 AY671739 AY671741 AY671746 AY671749 AY671750 AY671751 AY671753 AY671756 AY671763 AY671764 AY671765 AY671766 AY671767 AY671769 AY671771 AY671776 AY671781 AY671784 AY885181 AY941889 AY941914 AY941957 DQ005274 DQ005285 DQ100660 DQ100674 DQ100703 DQ100725 DQ100792 DQ100829 DQ100832 DQ100964 DQ926158 DQ926198 DQ926208 DQ926421 DQ926458 DQ926468 DQ926470 DQ926478 DQ926497 DQ926599 DQ926603 EF544907 EF544958 EF544959 EF544973 FJ208782 FJ492903 FJ492909 FJ492910 GU570373 HM152498 HM152511 HM152516 HQ392880 HQ689741 L12192 L23518 L23934 L25293 M26998 M74468 S64473 S66098 S67110 U00497 U00556 U22391 U71103 U89766 U97246 X56592 X87440 Z35492 Z46269 Z46271 Z46272 Z46273 Z46275 Z46277 Z46279 Z46282 Z46304 Z46305 Z46306 Z46307 Z46308 Z46340 Z46341 Z46342 Z49135 Z49140 Z49141 Z49143 Z70604 Z70605 Z70610 Z70616 Z70617 Z70625 Z70626 Z70627 Z70637 Z70638 Z70639 Z70640 Z70641 Z70642 Z70643 Z70644 Z70650 Z74665 Z74695 AY670806 AY670808 AY957532 AY686937 AY957534 DQ535279 DQ535294 DQ535296 DQ535314 DQ535320 DQ535326 DQ535459 EF178028 EF178136 HM996258 M84508 FJ039792 M84512 X54441 AY671298 AY670999 AY671028 AF283780 AF283781 M74018 M74021 AY670983 AY670985 AY670987 AY670989 AY670992 AY670993 AY670995 AY670997 AY670998 AY671018 AY671025 AY671033 AY671043 AY671307 AY671310 AY671046 AY671049 AY671205 AF283784 AY671151 AY671233 AJ579207 AY670982 AY671003 AY671029 AY671050 AY671156 AY671160 AY671171 AY671177 AY671190 AY671199 AY671201 AY671212 AY671226 AY671232 AY671235 AY671236 AY671250 AY671251 AY671261 AY671262 AY671270 AY671272 AY671278 AY671281 AY671287 AY671308 Z47229 AF062101 AF062146 AF062152 AF062158 AF062173 AF062181 AF062183 AF062187 AF062192 AF062196 AF062217 AF062218 AF062250 AJ579203 AY204755 AY204757 AY204759 AY204761 AY671006 AY671008 AY671061 AY671064 AY671168 AY671175 AY671183 AY671200 AY671207 AY671220 AY671238 AY671258 AY671268 AY671275 AY671289 AY671290 AY671303 AY671305 AY671696 AY671705 AY671713 AY671722 AY671727 AY671728 S59161 X64152 X64153 X65904 Z47228 Z47234 Z47241 Z75362 Z75374 Z75376 Z75379 Z75386 Z75389 Z75392 Z75394 Z75398 CU674902 CU678316 BC002963 BC073767 CU675962 BC017356 BC019235 BC001872 BC006180 BX538126 AK301454 TSC_hg19_v1_chr14_-_106830060 AK126280 AK128649 AK127921 CR933690	14247	-	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 AJ245014 AJ245018 AJ245021 AJ245023 AJ245024 AJ245030 AJ245033 AJ245034 AJ245038 AJ245056 AJ245060 AJ245061 AJ245071 AJ249629 AJ279514 AJ279515 AJ279525 AJ279530 AJ308449 AJ389175 AJ389176 AJ414019 AJ416561 AJ555264 AJ556674 AJ556675 AJ556676 AJ556691 AJ556693 AJ574781 AJ579117 AJ579126 AJ579130 AJ579131 AJ579134 AJ579138 AJ579166 AJ579168 AJ579169 AJ579170 AJ579179 AJ579200 AJ579202 AJ579205 AJ579209 AJ579210 AJ579214 AJ579244 AJ579245 AJ579292 AJ579293 AJ579297 AJ617569 AY165854 AY268372 AY268373 AY300037 AY577300 AY640552 AY670713 AY670734 AY670740 AY670742 AY670747 AY670751 AY670754 AY670758 AY670762 AY670771 AY670774 AY670799 AY670802 AY670805 AY670817 AY670822 AY670823 AY670825 AY670849 AY670850 AY670858 AY670859 AY670865 AY670874 AY670881 AY670894 AY670896 AY670897 AY670902 AY670914 AY670920 AY670922 AY670947 AY670950 AY670955 AY670960 AY670961 AY670970 AY670972 AY670978 AY670980 AY670986 AY670991 AY671017 AY671060 AY671089 AY671090 AY671101 AY671109 AY671112 AY671114 AY671119 AY671124 AY671126 AY671136 AY671137 AY671140 AY671146 AY671264 AY671318 AY671368 AY671369 AY671384 AY671392 AY671418 AY671433 AY671439 AY671482 AY671489 AY671517 AY671524 AY671534 AY671536 AY671545 AY671552 AY671560 AY671562 AY671563 AY671567 AY671572 AY671576 AY671578 AY671582 AY671583 AY671588 AY671598 AY671599 AY671600 AY671602 AY671616 AY671624 AY671626 AY671635 AY671638 AY671661 AY671672 AY671677 AY671681 AY671730 AY671736 AY671744 AY671752 AY671773 AY671774 AY671778 AY671780 AY671786 AY781849 AY885184 AY941931 AY941962 AY941975 AY960198 AY960201 AY971014 AY971044 AY971045 AY971080 AY971086 AY998723 DQ005257 DQ065676 DQ100673 DQ100687 DQ100701 DQ100784 DQ100821 DQ100822 DQ100824 DQ100825 DQ100897 DQ100953 DQ205162 DQ205173 DQ212518 DQ212520 DQ328872 DQ431572 DQ431610 DQ926162 DQ926290 DQ926291 DQ926302 DQ926317 DQ926323 DQ926515 DQ926519 DQ926521 DQ926608 FJ039783 FJ039790 FJ039791 FJ385371 FJ385402 FR820867 FR820868 FR820869 FR820870 FR820871 FR820872 FR820873 FR820875 GU570374 HM152512 HM152521 HQ689769 JN201901 L12190 L43117 U00494 U00566 U00571 U00578 U00581 U64496 U96278 U96280 U96285 U96287 U97243 X84336 X84339 Y08428 Y09249 Y09390 Z18316 Z46285 Z70608 Z70621 Z70622 Z70623 Z70631 Z70632 Z70654 Z70655 Z70656 Z70657 DQ926182 DQ926347 DQ926348 AY944695 DQ535289 DQ535393 DQ535427 DQ535433 DQ535456 EF177973 EF178111 EF178132 FJ385279 AJ579303 X54447 AY392937 X17678 S63731 X54437 Z14197 AY671021 AY670994 AY671000 AY671001 AY671009 AY671012 AY671016 AY671023 AY671031 AY671036 AY671054 AY671142 AY671197 AY671335 AY671182 AF013622 AY671048 AY671052 AY671159 AY671179 AY671239 AY671263 AY671276 AY671279 AY671282 AF013619 AF062204 AF062240 AF247737 AY671165 AY671185 AY671217 AY671297 AY671693 AY671723 AY671725 CU677619 EU937522 L23556 L38425 M99607 U86523 U86524 X65903 X65911 Z14198 Z75364 Z75388 AY671162 X52895 TSC_hg19_v1_chr14_-_106878091 X56158 M97921 AF417843 AK057754 AK057775 AK130529 BC025985 BX640824 AK130609 Z14206 AK126352 AK129514 AK129592 AK129637 AK130589 AK130611 BC016369 BX538077 BX648082 BX648874 Z14195 AK095222 AK303185	62248	-	GQ232933 AY003798 FJ840151 FJ873995 EF407840 AM279492 AM279629 HM774186 AY957513 EF633772 AY062305 DQ524058 AF174122 AY944701 DQ065664 DQ065670 DQ065719 DQ065726 DQ926522 EF178118 EF633803 FJ385316 GU570332 HM995173 HM995251 HM995315 HM995321 HM995523 AB021518 AB021527 AF035043 AF471473 AJ579183 DQ535349 DQ535444 GU570331 GU570333 X95661 Z47231 BC092518 TSC_hg19_v1_chr14_-_106926725 BX647160 AK123783 AK097306 AK097329	110900	-	BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073765|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK130813|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130585|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128568|IGHD|3495|immunoglobulin heavy constant delta##AK129620|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC087841|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF174049|SKAP2|8935|src kinase associated phosphoprotein 2##BC002963|IGHM|3507|immunoglobulin heavy constant mu##BC073767|IGHM|3507|immunoglobulin heavy constant mu##BC017356|IGHM|3507|immunoglobulin heavy constant mu##BC019235|IGHM|3507|immunoglobulin heavy constant mu##BC001872|IGHM|3507|immunoglobulin heavy constant mu##BC006180|IGHM|3507|immunoglobulin heavy constant mu##BX538126|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK126280|IGHD|3495|immunoglobulin heavy constant delta##AK128649|IGHD|3495|immunoglobulin heavy constant delta##AK127921|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.404915	CTCF.p2:-12:0.405
chr1	41469536	41469683	reg1029213.p2	4.921	+	TSC_hg19_v1_chr1_+_41445419 AK299122 X52142 AK225899	-24175	+	AK297386 TSC_hg19_v1_chr1_+_41445376	-24229	+	TSC_hg19_v1_chr1_+_41445365 BC009408	-24247	+	BC022037 AK292296 BC037879 NM_001168247 AK097609 NM_144990	17797	-	AK301497 AK299383 NM_001172222	155962	-	BC009752 NM_001031694	157465	-	AK299122|CTPS|1503|CTP synthase##X52142|CTPS|1503|CTP synthase##AK225899|CTPS|1503|CTP synthase##AK297386|CTPS|1503|CTP synthase##BC009408|CTPS|1503|CTP synthase##BC022037|SLFNL1|200172|schlafen-like 1##AK292296|SLFNL1|200172|schlafen-like 1##BC037879|SLFNL1|200172|schlafen-like 1##NM_001168247|SLFNL1|200172|schlafen-like 1##AK097609|SLFNL1|200172|schlafen-like 1##NM_144990|SLFNL1|200172|schlafen-like 1##AK301497|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK299383|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172222|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	0.880634	CTCF.p2:-1:0.881
chr17	29860744	29860898	reg1030817.p1	4.921	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-45760	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-141957	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-142154	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	325450	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	367845	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	367910	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.053622	
chr19	40169872	40170004	reg1022717.p2	4.921	+	FJ613352 NM_001190441	-23393	+	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	-76753	+	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	-139118	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	25105	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	58701	-	NM_001143832	97295	+	FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##NM_001143832|LEUTX|342900|leucine twenty homeobox	0.0	
chr19	42388397	42388557	reg1023912.p2	4.921	+	TSC_hg19_v1_chr19_+_42387309 U64105	-1159	+	BC064996 TSC_hg19_v1_chr19_+_42387266 NM_004706 NM_198977 BC011726	-1200	+	NM_001783 NM_021601 AK223371 M80462 M86921 AK315337 BC113731 BC113733 S46706 HQ258131 M74721 S75217 S79248 X83540	-7196	+	NM_199002 TSC_hg19_v1_chr19_+_42388510 BC034013 BC067262	9	+	AF112996 BT019964 CR457214 CR542116 AB590878 AF112202 AJ133534 BC008950 TSC_hg19_v1_chr19_-_42463499	74991	-	TSC_hg19_v1_chr19_-_42463500 NM_006423	75043	-	U64105|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC064996|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_004706|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_198977|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC011726|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_001783|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##NM_021601|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##AK223371|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##M80462|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##M86921|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##AK315337|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##BC113731|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##BC113733|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##S46706|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##HQ258131|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##M74721|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##S75217|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##S79248|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##X83540|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##NM_199002|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC034013|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC067262|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)##BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)##CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)##CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)##AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)##AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)##BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)##NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)	0.043206	
chr20	2894924	2895013	reg1027085.p2	4.921	+	TSC_hg19_v1_chr20_+_2854126 NM_080840 AK294990 AK297293 BX571753 AB209702 AK290233 AK294499 BC027308 X54890	-40723	+	BC126431 M34668 NM_002836 BC064406	-50185	+	BC014247 AK026029 TSC_hg19_v1_chr20_-_2821811	-73168	-	NM_080841 X53364 TSC_hg19_v1_chr20_+_2903902	8913	+	TSC_hg19_v1_chr20_+_2944935 CU693258 DQ891155 DQ894334	49958	+	AF036330 NM_001501 NM_178331 NM_178332 BC069362 BC115399 BC115400	129299	+	NM_080840|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK294990|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK297293|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BX571753|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AB209702|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK290233|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AK294499|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BC027308|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##X54890|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BC126431|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##M34668|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##NM_002836|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BC064406|VPS16|64601|vacuolar protein sorting 16 homolog (S. cerevisiae)##BC014247|FAM113A|64773|family with sequence similarity 113, member A##AK026029|FAM113A|64773|family with sequence similarity 113, member A##NM_080841|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##X53364|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##AF036330|GNRH2|2797|gonadotropin-releasing hormone 2##NM_001501|GNRH2|2797|gonadotropin-releasing hormone 2##NM_178331|GNRH2|2797|gonadotropin-releasing hormone 2##NM_178332|GNRH2|2797|gonadotropin-releasing hormone 2##BC069362|GNRH2|2797|gonadotropin-releasing hormone 2##BC115399|GNRH2|2797|gonadotropin-releasing hormone 2##BC115400|GNRH2|2797|gonadotropin-releasing hormone 2	0.897718	CTCF.p2:-7:0.898
chr9	132872562	132872719	reg1027289.p1	4.921	+	TSC_hg19_v1_chr9_+_132816199 AK026244 AK225456 BC030147 AF376725 AX776003 BC110518 AK293092 AB385490 AB046844	-56424	+	TSC_hg19_v1_chr9_+_132816196 BC143655	-56449	+	BC039728 NM_001136557 NM_001136558 NM_020960	-56656	+	AK024651 TSC_hg19_v1_chr9_+_132897386	24724	+	TSC_hg19_v1_chr9_+_132934685 BC004856 NM_014286 AF134479 AF186409 X84048 AB463656	62173	+	NM_001128826	90231	+	AK026244|GPR107|57720|G protein-coupled receptor 107##AK225456|GPR107|57720|G protein-coupled receptor 107##BC030147|GPR107|57720|G protein-coupled receptor 107##AF376725|GPR107|57720|G protein-coupled receptor 107##BC110518|GPR107|57720|G protein-coupled receptor 107##AK293092|GPR107|57720|G protein-coupled receptor 107##AB046844|GPR107|57720|G protein-coupled receptor 107##BC143655|GPR107|57720|G protein-coupled receptor 107##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107##AK024651|GPR107|57720|G protein-coupled receptor 107##BC004856|NCS1|23413|neuronal calcium sensor 1##NM_014286|NCS1|23413|neuronal calcium sensor 1##AF134479|NCS1|23413|neuronal calcium sensor 1##AF186409|NCS1|23413|neuronal calcium sensor 1##X84048|NCS1|23413|neuronal calcium sensor 1##NM_001128826|NCS1|23413|neuronal calcium sensor 1	0.920372	CTCF.p2:7:0.920
chrX	134618824	134618919	reg1006681.p2	4.921	+	BC030620 TSC_hg19_v1_chrX_+_134555878 BC051704	-62997	+	AY927530 NM_152695 TSC_hg19_v1_chrX_+_134478720 AK314344 AK074194 AL833407 AY280801 BC060768 BC065938 AL833109	-140147	+	TSC_hg19_v1_chrX_-_134478038 AL831984 BC029787	-140868	-	TSC_hg19_v1_chrX_+_134654584 BX648113 NM_182540 AK096544 AL833319	35698	+	TSC_hg19_v1_chrX_+_134654737 BC140715 AK308423	35860	+	AY743709 NM_001017417 BC140735 BC140926 BC144437 BC140913	228363	+	BC030620|LINC00086|399668|long intergenic non-protein coding RNA 86##BC051704|LINC00086|399668|long intergenic non-protein coding RNA 86##AY927530|ZNF449|203523|zinc finger protein 449##NM_152695|ZNF449|203523|zinc finger protein 449##AK314344|ZNF449|203523|zinc finger protein 449##AK074194|ZNF449|203523|zinc finger protein 449##AL833407|ZNF449|203523|zinc finger protein 449##AY280801|ZNF449|203523|zinc finger protein 449##BC060768|ZNF449|203523|zinc finger protein 449##BC065938|ZNF449|203523|zinc finger protein 449##AL833109|ZNF449|203523|zinc finger protein 449##AL831984|ZNF75D|7626|zinc finger protein 75D##BC029787|ZNF75D|7626|zinc finger protein 75D##BX648113|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##NM_182540|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK096544|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AL833319|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BC140715|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK308423|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AY743709|CT45A1|541466|cancer/testis antigen family 45, member A1##NM_001017417|CT45A1|541466|cancer/testis antigen family 45, member A1##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1	0.0	
chr1	110333545	110333693	reg1032646.p1	4.920	+	AY074930 TSC_hg19_v1_chr1_-_110306546 AK307932 AK310979 AK308196 AK025175 AK225235 BC012926 AK292198 AK290261 NM_024526 NM_133181 NM_139053	-27035	-	BC008790 NM_000849	-49960	-	BT019945 CR542108 AB527634 DQ891834 EU176637 BC000088 EF363096 J05459 AB209816 AK313444 TSC_hg19_v1_chr1_-_110282939 AK304300	-50691	-	NM_000757 NM_172210 NM_172212	119613	+	BC021117 TSC_hg19_v1_chr1_+_110453470 AK291660 M37435 M27087 U22386 AB527768 M64592	119931	+	AF315687 TSC_hg19_v1_chr1_+_110527316	193692	+	AY074930|EPS8L3|79574|EPS8-like 3##AK307932|EPS8L3|79574|EPS8-like 3##AK310979|EPS8L3|79574|EPS8-like 3##AK308196|EPS8L3|79574|EPS8-like 3##AK025175|EPS8L3|79574|EPS8-like 3##AK225235|EPS8L3|79574|EPS8-like 3##BC012926|EPS8L3|79574|EPS8-like 3##AK292198|EPS8L3|79574|EPS8-like 3##AK290261|EPS8L3|79574|EPS8-like 3##NM_024526|EPS8L3|79574|EPS8-like 3##NM_133181|EPS8L3|79574|EPS8-like 3##NM_139053|EPS8L3|79574|EPS8-like 3##BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)##NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)##BT019945|GSTM3|2947|glutathione S-transferase mu 3 (brain)##CR542108|GSTM3|2947|glutathione S-transferase mu 3 (brain)##DQ891834|GSTM3|2947|glutathione S-transferase mu 3 (brain)##EU176637|GSTM3|2947|glutathione S-transferase mu 3 (brain)##BC000088|GSTM3|2947|glutathione S-transferase mu 3 (brain)##EF363096|GSTM3|2947|glutathione S-transferase mu 3 (brain)##J05459|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AB209816|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AK313444|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AK304300|GSTM3|2947|glutathione S-transferase mu 3 (brain)##NM_000757|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172210|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172212|CSF1|1435|colony stimulating factor 1 (macrophage)##BC021117|CSF1|1435|colony stimulating factor 1 (macrophage)##AK291660|CSF1|1435|colony stimulating factor 1 (macrophage)##M37435|CSF1|1435|colony stimulating factor 1 (macrophage)##M27087|CSF1|1435|colony stimulating factor 1 (macrophage)##U22386|CSF1|1435|colony stimulating factor 1 (macrophage)##M64592|CSF1|1435|colony stimulating factor 1 (macrophage)##AF315687|AHCYL1|10768|adenosylhomocysteinase-like 1	0.0	
chr18	46476489	46476556	reg1023183.p3	4.920	+	AK301535 NM_001190822	-820	-	AK131394 NM_001190823	-7375	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-410749	+	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	245	-	AF010193 NM_001190821 NM_005904	558	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	510529	-	AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin	0.033428	
chr4	96046201	96046338	reg1030031.p1	4.920	+	TSC_hg19_v1_chr4_+_95679109 NM_001203 U89326	-367163	+	BC026029 AM393306 AM393394 AM393485 AM393621 AM393813 DQ890686 DQ893868 AB587372 CU676108 CU679071 AY598328 BT007328 TSC_hg19_v1_chr4_+_95376500	-669819	+	TSC_hg19_v1_chr4_+_95373092 BC017902 BC008741 AK291898 AK291624 AK304125 AK296980 AL832157 AL832686 AF061258 AL833151 AL833438	-673173	+	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	423910	-	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	424107	-	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	714989	+	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB##U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB##BC026029|PDLIM5|10611|PDZ and LIM domain 5##AM393306|PDLIM5|10611|PDZ and LIM domain 5##AM393394|PDLIM5|10611|PDZ and LIM domain 5##AM393485|PDLIM5|10611|PDZ and LIM domain 5##AM393621|PDLIM5|10611|PDZ and LIM domain 5##AM393813|PDLIM5|10611|PDZ and LIM domain 5##DQ890686|PDLIM5|10611|PDZ and LIM domain 5##DQ893868|PDLIM5|10611|PDZ and LIM domain 5##AY598328|PDLIM5|10611|PDZ and LIM domain 5##BT007328|PDLIM5|10611|PDZ and LIM domain 5##BC017902|PDLIM5|10611|PDZ and LIM domain 5##BC008741|PDLIM5|10611|PDZ and LIM domain 5##AK291898|PDLIM5|10611|PDZ and LIM domain 5##AK291624|PDLIM5|10611|PDZ and LIM domain 5##AK304125|PDLIM5|10611|PDZ and LIM domain 5##AK296980|PDLIM5|10611|PDZ and LIM domain 5##AL832157|PDLIM5|10611|PDZ and LIM domain 5##AL832686|PDLIM5|10611|PDZ and LIM domain 5##AF061258|PDLIM5|10611|PDZ and LIM domain 5##AL833151|PDLIM5|10611|PDZ and LIM domain 5##AL833438|PDLIM5|10611|PDZ and LIM domain 5##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2	0.942988	CTCF.p2:-1:0.943
chr6	111682991	111683098	reg1028122.p1	4.920	+	TSC_hg19_v1_chr6_+_111580568 BC036115	-102472	+	NM_153369 TSC_hg19_v1_chr6_+_111580541 AK093136 AX747946 AK292735 AK315016	-102521	+	AB057445 NM_018593 BC066985 TSC_hg19_v1_chr6_+_111408810	-274249	+	BC038986 AF303220 AF157476 AF179428 AF179429 TSC_hg19_v1_chr6_-_111804167	121104	-	BC035823 TSC_hg19_v1_chr6_-_111804371	121309	-	AF071798 NM_002912 TSC_hg19_v1_chr6_-_111804420 AF058701	121380	-	BC036115|KIAA1919|91749|KIAA1919##NM_153369|KIAA1919|91749|KIAA1919##AK093136|KIAA1919|91749|KIAA1919##AK292735|KIAA1919|91749|KIAA1919##AK315016|KIAA1919|91749|KIAA1919##AB057445|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##NM_018593|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC066985|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##AF303220|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF157476|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179428|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179429|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##BC035823|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF071798|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##NM_002912|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF058701|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)	0.017033	
chr7	154861768	154861915	reg1031416.p1	4.920	+	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	-66630	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	-67171	-	TSC_hg19_v1_chr7_+_154720213 BC033053 AK311721 AK056609 BC050402	-141644	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	736	+	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	227681	+	AK291675 TSC_hg19_v1_chr7_+_155089667	227803	+	BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##BC033053|LOC100132707|100132707|uncharacterized LOC100132707##AK311721|LOC100132707|100132707|uncharacterized LOC100132707##AK056609|LOC100132707|100132707|uncharacterized LOC100132707##BC050402|LOC100132707|100132707|uncharacterized LOC100132707##BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##AK291675|INSIG1|3638|insulin induced gene 1	0.0	
chr1	185287106	185287286	reg1020009.p2	4.919	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-726	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-877	-	TSC_hg19_v1_chr1_+_185126418 AK291443	-160800	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	416380	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	978211	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	1057061	-	NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)	0.607471	CTCF.p2:8:0.607
chr14	53390916	53391019	reg1027929.p1	4.919	+	TSC_hg19_v1_chr14_-_53258376 NM_198066	-132582	-	TSC_hg19_v1_chr14_-_53258326 BC012179 AK090577	-132731	-	TSC_hg19_v1_chr14_+_53196923 BX647636 BC020265 BC146995 BC146998	-194010	+	TSC_hg19_v1_chr14_-_53417272 EU979385 CU675940 EU831994 EU832087	26312	-	Z24725 AF443279 TSC_hg19_v1_chr14_-_53417769 BX161467 AK291738	26753	-	TSC_hg19_v1_chr14_-_53417903 BC017327 NM_001134999 NM_001135000 NM_006832	26900	-	NM_198066|GNPNAT1|64841|glucosamine-phosphate N-acetyltransferase 1##BC012179|GNPNAT1|64841|glucosamine-phosphate N-acetyltransferase 1##AK090577|GNPNAT1|64841|glucosamine-phosphate N-acetyltransferase 1##BX647636|STYX|6815|serine/threonine/tyrosine interacting protein##BC020265|STYX|6815|serine/threonine/tyrosine interacting protein##BC146995|STYX|6815|serine/threonine/tyrosine interacting protein##BC146998|STYX|6815|serine/threonine/tyrosine interacting protein##EU979385|FERMT2|10979|fermitin family member 2##EU831994|FERMT2|10979|fermitin family member 2##EU832087|FERMT2|10979|fermitin family member 2##Z24725|FERMT2|10979|fermitin family member 2##AF443279|FERMT2|10979|fermitin family member 2##BX161467|FERMT2|10979|fermitin family member 2##AK291738|FERMT2|10979|fermitin family member 2##BC017327|FERMT2|10979|fermitin family member 2##NM_001134999|FERMT2|10979|fermitin family member 2##NM_001135000|FERMT2|10979|fermitin family member 2##NM_006832|FERMT2|10979|fermitin family member 2	0.074303	
chr15	29960337	29960441	reg1025475.p1	4.919	+	NM_015307	-97463	-	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	-398360	-	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	-398419	-	AK304758 TSC_hg19_v1_chr15_-_30114336	153953	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	154234	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	725323	-	NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion	0.062041	
chr20	57225623	57225792	reg1019128.p1	4.919	+	BC101758 BC101760 AK074647 NM_153360 AK293299	-135809	-	AK124571 TSC_hg19_v1_chr20_+_57022525	-203215	+	TSC_hg19_v1_chr20_+_56964291 BC001712 AF086628 AF086629 AK298036 AK127252 AB529043 CU674842 BT009811	-261253	+	TSC_hg19_v1_chr20_+_57226338 AK316547 NM_001001433 NM_001134772 NM_001134773 NM_001204868 NM_003763 AK304867 AB209296	681	+	TSC_hg19_v1_chr20_+_57226873 BC019042 AF008935 AF008936 AF008937 BC073876 AF038897 AF428146 AK026970	1284	+	NM_001204872 NM_001204873 AK297667 AK307771	38481	+	BC101758|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##BC101760|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK074647|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##NM_153360|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK293299|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK124571|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BC001712|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086628|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086629|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK298036|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK127252|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BT009811|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK316547|STX16|8675|syntaxin 16##NM_001001433|STX16|8675|syntaxin 16##NM_001134772|STX16|8675|syntaxin 16##NM_001134773|STX16|8675|syntaxin 16##NM_001204868|STX16|8675|syntaxin 16##NM_003763|STX16|8675|syntaxin 16##AK304867|STX16|8675|syntaxin 16##AB209296|STX16-NPEPL1|100534593|STX16-NPEPL1 readthrough (non-protein coding)##BC019042|STX16|8675|syntaxin 16##AF008935|STX16|8675|syntaxin 16##AF008936|STX16|8675|syntaxin 16##AF008937|STX16|8675|syntaxin 16##BC073876|STX16|8675|syntaxin 16##AF038897|STX16|8675|syntaxin 16##AF428146|STX16|8675|syntaxin 16##AK026970|STX16|8675|syntaxin 16##NM_001204872|NPEPL1|79716|aminopeptidase-like 1##NM_001204873|NPEPL1|79716|aminopeptidase-like 1##AK297667|NPEPL1|79716|aminopeptidase-like 1##AK307771|NPEPL1|79716|aminopeptidase-like 1	0.690825	CTCF.p2:-11:0.691
chrX	48774479	48774572	reg1006835.p1	4.919	+	D84454 NM_001042498	-5291	-	CR450287 D88146 NM_005660 AK225508 AK290284 AK293415 AK293419 AK298484 AK299748 TSC_hg19_v1_chrX_-_48768926 BC035747 NM_001032289 AK292816	-5594	-	NM_001167992 AJ973593 AJ973594 AJ973595 AJ973596 AJ973597 AJ973598 AJ973599 AJ973600 AJ973602 AJ973603 AJ973604 AJ973605 AJ973606 AJ973607 AJ973601 AB041833 AB041834 AB041835 AB041836 AB385557 CU680304 DQ892221 DQ894883	-18742	+	U77735 BC018111 AK312745 TSC_hg19_v1_chrX_-_48776302 AK290931 NM_006875	1822	-	TSC_hg19_v1_chrX_-_48814831 BC028225	40280	-	TSC_hg19_v1_chrX_-_48814870 BC009917 NM_001136157 NM_001136158 NM_017602	40349	-	D84454|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001042498|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##CR450287|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##D88146|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_005660|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK225508|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK290284|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293415|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293419|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK298484|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK299748|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC035747|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001032289|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK292816|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001167992|PQBP1|10084|polyglutamine binding protein 1##AJ973593|PQBP1|10084|polyglutamine binding protein 1##AJ973594|PQBP1|10084|polyglutamine binding protein 1##AJ973595|PQBP1|10084|polyglutamine binding protein 1##AJ973596|PQBP1|10084|polyglutamine binding protein 1##AJ973597|PQBP1|10084|polyglutamine binding protein 1##AJ973598|PQBP1|10084|polyglutamine binding protein 1##AJ973599|PQBP1|10084|polyglutamine binding protein 1##AJ973600|PQBP1|10084|polyglutamine binding protein 1##AJ973602|PQBP1|10084|polyglutamine binding protein 1##AJ973603|PQBP1|10084|polyglutamine binding protein 1##AJ973604|PQBP1|10084|polyglutamine binding protein 1##AJ973605|PQBP1|10084|polyglutamine binding protein 1##AJ973606|PQBP1|10084|polyglutamine binding protein 1##AJ973607|PQBP1|10084|polyglutamine binding protein 1##AJ973601|PQBP1|10084|polyglutamine binding protein 1##AB041833|PQBP1|10084|polyglutamine binding protein 1##AB041834|PQBP1|10084|polyglutamine binding protein 1##AB041835|PQBP1|10084|polyglutamine binding protein 1##AB041836|PQBP1|10084|polyglutamine binding protein 1##DQ892221|PQBP1|10084|polyglutamine binding protein 1##DQ894883|PQBP1|10084|polyglutamine binding protein 1##U77735|PIM2|11040|pim-2 oncogene##BC018111|PIM2|11040|pim-2 oncogene##AK312745|PIM2|11040|pim-2 oncogene##AK290931|PIM2|11040|pim-2 oncogene##NM_006875|PIM2|11040|pim-2 oncogene##BC028225|OTUD5|55593|OTU domain containing 5##BC009917|OTUD5|55593|OTU domain containing 5##NM_001136157|OTUD5|55593|OTU domain containing 5##NM_001136158|OTUD5|55593|OTU domain containing 5##NM_017602|OTUD5|55593|OTU domain containing 5	0.913816	CTCF.p2:20:0.914
chr11	93355350	93355446	reg1024238.p1	4.918	+	AF197137 TSC_hg19_v1_chr11_-_93276558 BC031564 NM_020179	-78863	-	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	-291555	+	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	-424313	-	TSC_hg19_v1_chr11_+_93394847 NM_033395 BC015989 BC017394	39436	+	AB051518 TSC_hg19_v1_chr11_+_93394877	39491	+	AF275800 TSC_hg19_v1_chr11_-_93474661 BC001972 AF086435 AK027016 NM_024116	119208	-	AF197137|C11orf75|56935|chromosome 11 open reading frame 75##BC031564|C11orf75|56935|chromosome 11 open reading frame 75##NM_020179|C11orf75|56935|chromosome 11 open reading frame 75##NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_033395|KIAA1731|85459|KIAA1731##BC015989|KIAA1731|85459|KIAA1731##BC017394|KIAA1731|85459|KIAA1731##AB051518|KIAA1731|85459|KIAA1731##AF275800|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##BC001972|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AF086435|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AK027016|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##NM_024116|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa	0.570172	CTCF.p2:20:0.570
chr21	46974823	46974900	reg1013206.p1	4.918	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-12529	-	AK303168 NM_001205207	-20327	-	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	-99443	+	TSC_hg19_v1_chr21_+_47063638 AK310131	88768	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	295027	+	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	426824	+	U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1##AK310131|PCBP3|54039|poly(rC) binding protein 3##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1	0.0	
chr2	209272567	209272675	reg1027633.p1	4.918	+	BC036811 NM_005048 U25128 HQ257935 AY497546	-960	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-47996	+	TSC_hg19_v1_chr2_+_209131083 AK127769	-141538	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	1016133	+	BC110423 TSC_hg19_v1_chr2_+_210444185	1171549	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	1171773	+	BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##AK294181|PTH2R|5746|parathyroid hormone 2 receptor##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC110423|MAP2|4133|microtubule-associated protein 2##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2	0.0	
chr4	4577089	4577184	reg1028743.p1	4.918	+	TSC_hg19_v1_chr4_+_4543925 BC025734	-33252	+	TSC_hg19_v1_chr4_-_4543750 NM_016930	-33375	-	TSC_hg19_v1_chr4_-_4543741 AK310026	-33405	-	TSC_hg19_v1_chr4_+_4861391 NM_002448 AK290636 M97676 BC021285	284262	+	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	444010	-	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	476144	+	BC025734|LOC100507266|100507266|uncharacterized LOC100507266##NM_016930|STX18|53407|syntaxin 18##AK310026|STX18|53407|syntaxin 18##NM_002448|MSX1|4487|msh homeobox 1##AK290636|MSX1|4487|msh homeobox 1##M97676|MSX1|4487|msh homeobox 1##BC021285|MSX1|4487|msh homeobox 1##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B	0.013509	
chr7	115981719	115981841	reg1029673.p1	4.918	+	AK310995 NM_152829 AK291802 AF245357	-118761	+	NM_015641 AK299104 TSC_hg19_v1_chr7_+_115850592 BC001451 AK021575 AK300546 AK309324 AK222840 AF245356 AJ250865 AK315644 AB529039 EU176352 EU176694	-131127	+	TSC_hg19_v1_chr7_-_115670864 CR933605 NM_001018058 NM_012252	-310928	-	TSC_hg19_v1_chr7_+_116139705 AY353255 BC005256 NM_001206747 NM_001233 NM_198212 AK310786 AK311964 AF035752 AB451285 AB451417 AB489180 AM393815 BT007051 CR407685	157947	+	NM_001206748	158317	+	NM_001753 AK290871	183060	+	AK310995|TES|26136|testis derived transcript (3 LIM domains)##NM_152829|TES|26136|testis derived transcript (3 LIM domains)##AK291802|TES|26136|testis derived transcript (3 LIM domains)##AF245357|TES|26136|testis derived transcript (3 LIM domains)##NM_015641|TES|26136|testis derived transcript (3 LIM domains)##AK299104|TES|26136|testis derived transcript (3 LIM domains)##BC001451|TES|26136|testis derived transcript (3 LIM domains)##AK021575|TES|26136|testis derived transcript (3 LIM domains)##AK300546|TES|26136|testis derived transcript (3 LIM domains)##AK309324|TES|26136|testis derived transcript (3 LIM domains)##AK222840|TES|26136|testis derived transcript (3 LIM domains)##AF245356|TES|26136|testis derived transcript (3 LIM domains)##AJ250865|TES|26136|testis derived transcript (3 LIM domains)##AK315644|TES|26136|testis derived transcript (3 LIM domains)##EU176352|TES|26136|testis derived transcript (3 LIM domains)##EU176694|TES|26136|testis derived transcript (3 LIM domains)##CR933605|TFEC|22797|transcription factor EC##NM_001018058|TFEC|22797|transcription factor EC##NM_012252|TFEC|22797|transcription factor EC##AY353255|CAV2|858|caveolin 2##BC005256|CAV2|858|caveolin 2##NM_001206747|CAV2|858|caveolin 2##NM_001233|CAV2|858|caveolin 2##NM_198212|CAV2|858|caveolin 2##AK310786|CAV2|858|caveolin 2##AK311964|CAV2|858|caveolin 2##AF035752|CAV2|858|caveolin 2##AB451285|CAV2|858|caveolin 2##AB451417|CAV2|858|caveolin 2##AM393815|CAV2|858|caveolin 2##BT007051|CAV2|858|caveolin 2##CR407685|CAV2|858|caveolin 2##NM_001206748|CAV2|858|caveolin 2##NM_001753|CAV1|857|caveolin 1, caveolae protein, 22kDa##AK290871|CAV1|857|caveolin 1, caveolae protein, 22kDa	0.159726	
chr7	7693349	7693476	reg1027973.p2	4.918	+	TSC_hg19_v1_chr7_+_7680382 AK295253	-13039	+	BT007320 AB464142 TSC_hg19_v1_chr7_-_7680067 L07493 BC005264 AK311842	-13325	-	TSC_hg19_v1_chr7_+_7606667 AK294561	-86726	+	BC009868 NM_002947	64825	-	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	315021	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	608304	-	AK295253|LOC729852|729852|uncharacterized LOC729852##BT007320|RPA3|6119|replication protein A3, 14kDa##L07493|RPA3|6119|replication protein A3, 14kDa##BC005264|RPA3|6119|replication protein A3, 14kDa##AK311842|RPA3|6119|replication protein A3, 14kDa##AK294561|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr11	115944589	115944689	reg1023674.p1	4.917	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-569459	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-855991	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1395391	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	699059	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	714076	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	714099	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.03669	
chr1	20478717	20478897	reg1000704.p1	4.917	+	AK093645 AX748240 BX647458 NM_022819 AB528809	-12939	+	AB590095 AM392918 AM392954 AM392977 AM393597 AM393824 BC025706 NM_012400 AF112982 AY358606 AK290406 AF188625 AK310156 AK311903 AK301396	-32783	-	TSC_hg19_v1_chr1_+_20396654 NM_000929 BC036792 U03090	-82063	+	TSC_hg19_v1_chr1_+_20480706 BC041651	1956	+	NM_001105572	22879	-	BC047428 NM_152376 BX648631 AK058158 TSC_hg19_v1_chr1_+_20512591	33777	+	AK093645|PLA2G2F|64600|phospholipase A2, group IIF##BX647458|PLA2G2F|64600|phospholipase A2, group IIF##NM_022819|PLA2G2F|64600|phospholipase A2, group IIF##AM392918|PLA2G2D|26279|phospholipase A2, group IID##AM392954|PLA2G2D|26279|phospholipase A2, group IID##AM392977|PLA2G2D|26279|phospholipase A2, group IID##AM393597|PLA2G2D|26279|phospholipase A2, group IID##AM393824|PLA2G2D|26279|phospholipase A2, group IID##BC025706|PLA2G2D|26279|phospholipase A2, group IID##NM_012400|PLA2G2D|26279|phospholipase A2, group IID##AF112982|PLA2G2D|26279|phospholipase A2, group IID##AY358606|PLA2G2D|26279|phospholipase A2, group IID##AK290406|PLA2G2D|26279|phospholipase A2, group IID##AF188625|PLA2G2D|26279|phospholipase A2, group IID##AK310156|PLA2G2D|26279|phospholipase A2, group IID##AK311903|PLA2G2D|26279|phospholipase A2, group IID##AK301396|PLA2G2D|26279|phospholipase A2, group IID##NM_000929|PLA2G5|5322|phospholipase A2, group V##BC036792|PLA2G5|5322|phospholipase A2, group V##U03090|PLA2G5|5322|phospholipase A2, group V##NM_001105572|PLA2G2C|391013|phospholipase A2, group IIC##BC047428|UBXN10|127733|UBX domain protein 10##NM_152376|UBXN10|127733|UBX domain protein 10##BX648631|UBXN10|127733|UBX domain protein 10##AK058158|UBXN10|127733|UBX domain protein 10	0.0	
chr17	70418876	70418991	reg1028897.p2	4.917	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-301693	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-301763	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-301774	+	AK000477 TSC_hg19_v1_chr17_-_70588944	170010	-	AF331643 TSC_hg19_v1_chr17_-_71088816	669883	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	669890	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr21	42539874	42539958	reg1032251.p2	4.917	+	AF178532 AF188276 AF188277 NM_012105 NM_138991 NM_138992	-189	+	AF023450 NM_001389 AF217525	-320865	-	AB384859 AB209136 TSC_hg19_v1_chr21_-_42218650	-321298	-	AK075539 AK292056 AF050171 TSC_hg19_v1_chr21_+_42540086	154	+	TSC_hg19_v1_chr21_+_42540092 AY358927 AF117892 BC014453 AF204944 AF200192 AB590241 DQ895416 EU176330 AF200342	225	+	AK092431 AX747543 NM_182832	17249	-	AF178532|BACE2|25825|beta-site APP-cleaving enzyme 2##AF188276|BACE2|25825|beta-site APP-cleaving enzyme 2##AF188277|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_012105|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_138991|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_138992|BACE2|25825|beta-site APP-cleaving enzyme 2##AF023450|DSCAM|1826|Down syndrome cell adhesion molecule##NM_001389|DSCAM|1826|Down syndrome cell adhesion molecule##AF217525|DSCAM|1826|Down syndrome cell adhesion molecule##AB209136|DSCAM|1826|Down syndrome cell adhesion molecule##AK075539|BACE2|25825|beta-site APP-cleaving enzyme 2##AK292056|BACE2|25825|beta-site APP-cleaving enzyme 2##AF050171|BACE2|25825|beta-site APP-cleaving enzyme 2##AY358927|BACE2|25825|beta-site APP-cleaving enzyme 2##AF117892|BACE2|25825|beta-site APP-cleaving enzyme 2##BC014453|BACE2|25825|beta-site APP-cleaving enzyme 2##AF204944|BACE2|25825|beta-site APP-cleaving enzyme 2##AF200192|BACE2|25825|beta-site APP-cleaving enzyme 2##DQ895416|BACE2|25825|beta-site APP-cleaving enzyme 2##EU176330|BACE2|25825|beta-site APP-cleaving enzyme 2##AF200342|BACE2|25825|beta-site APP-cleaving enzyme 2##AK092431|PLAC4|191585|placenta-specific 4##NM_182832|PLAC4|191585|placenta-specific 4	0.484219	CTCF.p2:-11:0.484
chr5	10689680	10689860	reg1009850.p1	4.917	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-125328	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-247618	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-247767	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	71489	-	TSC_hg19_v1_chr5_-_10761341 BC002726	71572	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	71629	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.178113	
chr6	11877331	11877453	reg1028971.p2	4.917	+	NM_001143948 NM_032744	-98113	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-338894	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-494852	-	NM_002114	135331	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	413201	+	TSC_hg19_v1_chr6_+_12514301 D28417	636910	+	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr6	13259835	13259998	reg1020747.p2	4.917	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-542873	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-542973	+	TSC_hg19_v1_chr6_+_12514301 D28417	-745614	+	AK091836 AX747210 NM_001242698	35901	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	68784	-	AK027010 NM_001242630	148452	-	AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr6	151135109	151135289	reg1026605.p2	4.917	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	-214179	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	-445041	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-670958	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	51633	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	51722	+	TSC_hg19_v1_chr6_+_151187064 AL117452	51902	+	NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AL117452|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.0	
chr8	60032230	60032351	reg1030356.p1	4.917	+	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	-618	-	NM_003580 TSC_hg19_v1_chr8_-_59572413	-459879	-	BC041124 TSC_hg19_v1_chr8_-_59572386	-459904	-	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	1161631	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	1397150	+	AK297576 TSC_hg19_v1_chr8_+_61429494	1397204	+	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC041124|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family##AK297576|RAB2A|5862|RAB2A, member RAS oncogene family	0.036604	
chr14	64527496	64527625	reg1030287.p1	4.916	+	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	-207865	+	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	-332811	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	-418998	-	NM_182913 AY061758 AK297874	153317	+	NM_182910	155111	+	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	222103	-	NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)	0.0	
chr15	57754701	57754826	reg1028379.p1	4.916	+	AK056673 AK307410 NM_001252335 NM_032866 TSC_hg19_v1_chr15_+_57668732 AY274808 BC030995 AY610514	-86046	+	TSC_hg19_v1_chr15_+_57511630 AK294991 AK304007 AK311359 AK308101 NM_207040 BX537967 AM393573	-243096	+	TSC_hg19_v1_chr15_+_57210977 M83233	-543763	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	129402	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	244123	+	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	244217	+	AK056673|CGNL1|84952|cingulin-like 1##AK307410|CGNL1|84952|cingulin-like 1##NM_001252335|CGNL1|84952|cingulin-like 1##NM_032866|CGNL1|84952|cingulin-like 1##AY274808|CGNL1|84952|cingulin-like 1##BC030995|CGNL1|84952|cingulin-like 1##AY610514|CGNL1|84952|cingulin-like 1##AK294991|TCF12|6938|transcription factor 12##AK304007|TCF12|6938|transcription factor 12##AK311359|TCF12|6938|transcription factor 12##AK308101|TCF12|6938|transcription factor 12##NM_207040|TCF12|6938|transcription factor 12##BX537967|TCF12|6938|transcription factor 12##AM393573|TCF12|6938|transcription factor 12##M83233|TCF12|6938|transcription factor 12##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M	0.0	
chr16	699248	699378	reg1030645.p1	4.916	+	TSC_hg19_v1_chr16_+_691949 BC007346 BC111391	-7378	+	TSC_hg19_v1_chr16_+_691832 BC001912 NM_138418	-7476	+	TSC_hg19_v1_chr16_-_686303 AK293046 AK294482 AK295628 BC047118 AK057077 BC007207 NM_001040160 NM_001040161 NM_001040162 NM_001040165 NM_032366	-12981	-	TSC_hg19_v1_chr16_+_699362 AB067511 BC121185 BC121186 AK091062 AX746759 NM_145294	66	+	TSC_hg19_v1_chr16_+_718131 NM_138769 AY207375 AK308984 BC014942 AL834163	18794	+	TSC_hg19_v1_chr16_+_718165 AK024450 AJ517413	18865	+	BC007346|FAM195A|84331|family with sequence similarity 195, member A##BC111391|FAM195A|84331|family with sequence similarity 195, member A##BC001912|FAM195A|84331|family with sequence similarity 195, member A##NM_138418|FAM195A|84331|family with sequence similarity 195, member A##AK294482|C16orf13|84326|chromosome 16 open reading frame 13##AK295628|C16orf13|84326|chromosome 16 open reading frame 13##BC047118|C16orf13|84326|chromosome 16 open reading frame 13##AK057077|C16orf13|84326|chromosome 16 open reading frame 13##BC007207|C16orf13|84326|chromosome 16 open reading frame 13##NM_001040160|C16orf13|84326|chromosome 16 open reading frame 13##NM_001040161|C16orf13|84326|chromosome 16 open reading frame 13##NM_001040162|C16orf13|84326|chromosome 16 open reading frame 13##NM_001040165|C16orf13|84326|chromosome 16 open reading frame 13##NM_032366|C16orf13|84326|chromosome 16 open reading frame 13##AB067511|WDR90|197335|WD repeat domain 90##BC121185|WDR90|197335|WD repeat domain 90##BC121186|WDR90|197335|WD repeat domain 90##AK091062|WDR90|197335|WD repeat domain 90##NM_145294|WDR90|197335|WD repeat domain 90##NM_138769|RHOT2|89941|ras homolog gene family, member T2##AY207375|RHOT2|89941|ras homolog gene family, member T2##AK308984|RHOT2|89941|ras homolog gene family, member T2##BC014942|RHOT2|89941|ras homolog gene family, member T2##AL834163|RHOT2|89941|ras homolog gene family, member T2##AK024450|RHOT2|89941|ras homolog gene family, member T2##AJ517413|RHOT2|89941|ras homolog gene family, member T2	0.0	
chr5	176171815	176171911	reg1023929.p2	4.916	+	TSC_hg19_v1_chr5_+_176074497 AK024427 BC067105 BC010405 AF174603 CU679699 CU688248	-97311	+	NM_001006616 NM_012171 NM_130465 TSC_hg19_v1_chr5_+_176074470 AY037146	-97433	+	NM_001099408	-114181	+	TSC_hg19_v1_chr5_+_176237521 AK131380 NM_133369 BC157824	65692	+	U51333 BC028129 NM_002115	154460	-	AK304794 BX537376 NM_016290 AK023044 BC032561 BC006078 BC014069 AF349313 NM_001199297 NM_001199298 TSC_hg19_v1_chr5_-_176433806	261725	-	AK024427|TSPAN17|26262|tetraspanin 17##BC067105|TSPAN17|26262|tetraspanin 17##BC010405|TSPAN17|26262|tetraspanin 17##AF174603|TSPAN17|26262|tetraspanin 17##NM_001006616|TSPAN17|26262|tetraspanin 17##NM_012171|TSPAN17|26262|tetraspanin 17##NM_130465|TSPAN17|26262|tetraspanin 17##AY037146|TSPAN17|26262|tetraspanin 17##NM_001099408|EIF4E1B|253314|eukaryotic translation initiation factor 4E family member 1B##AK131380|UNC5A|90249|unc-5 homolog A (C. elegans)##NM_133369|UNC5A|90249|unc-5 homolog A (C. elegans)##BC157824|UNC5A|90249|unc-5 homolog A (C. elegans)##U51333|HK3|3101|hexokinase 3 (white cell)##BC028129|HK3|3101|hexokinase 3 (white cell)##NM_002115|HK3|3101|hexokinase 3 (white cell)##AK304794|UIMC1|51720|ubiquitin interaction motif containing 1##BX537376|UIMC1|51720|ubiquitin interaction motif containing 1##NM_016290|UIMC1|51720|ubiquitin interaction motif containing 1##AK023044|UIMC1|51720|ubiquitin interaction motif containing 1##BC032561|UIMC1|51720|ubiquitin interaction motif containing 1##BC006078|UIMC1|51720|ubiquitin interaction motif containing 1##AF349313|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199297|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199298|UIMC1|51720|ubiquitin interaction motif containing 1	0.071086	
chr6	5261580	5261760	reg1030709.p2	4.916	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-408	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-504	-	AF088060 EU831799 EU831876 TSC_hg19_v1_chr6_-_5260976 AK309661 AK291158 BC067762 AF170070 AF285118 BC009552	-673	-	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	20	+	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	745471	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	746027	-	AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AF088060|LYRM4|57128|LYR motif containing 4##EU831799|LYRM4|57128|LYR motif containing 4##EU831876|LYRM4|57128|LYR motif containing 4##AK309661|LYRM4|57128|LYR motif containing 4##AK291158|LYRM4|57128|LYR motif containing 4##BC067762|LYRM4|57128|LYR motif containing 4##AF170070|LYRM4|57128|LYR motif containing 4##AF285118|LYRM4|57128|LYR motif containing 4##BC009552|LYRM4|57128|LYR motif containing 4##NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1	0.0	
chr11	31855976	31856067	reg1030304.p1	4.915	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-16543	-	AB209177 TSC_hg19_v1_chr11_-_31832871 BX640762 NM_000280 NM_001604	-23152	-	BC011953 TSC_hg19_v1_chr11_-_31832790	-23234	-	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	256456	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	256678	+	AK093168 BC032861 NM_001198551 NM_001198552	596339	-	AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AB209177|PAX6|5080|paired box 6##BX640762|PAX6|5080|paired box 6##NM_000280|PAX6|5080|paired box 6##NM_001604|PAX6|5080|paired box 6##BC011953|PAX6|5080|paired box 6##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1	0.225906	CTCF.p2:-23:0.226
chr14	83322271	83322399	reg1026511.p1	4.915	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-1322108	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-1322187	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-1457509	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	2674138	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	2674206	+	TSC_hg19_v1_chr14_+_85999692 AK297248	2677250	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.740596	CTCF.p2:5:0.741
chr15	41062283	41062464	reg1023657.p3	4.915	+	NM_001130448 BC027487 AK291344	-156	+	TSC_hg19_v1_chr15_+_41056274 AK223430 AK311872 NM_005258 BC112262 BC112264 BC143904 HQ258032	-6065	+	TSC_hg19_v1_chr15_-_41047453 AK001441 NM_018145 AK123192	-14909	-	TSC_hg19_v1_chr15_+_41099254 NM_001077268 AK122779 BC015738 AF445414	36969	+	AB528922 AK001496 AK308659 TSC_hg19_v1_chr15_-_41099659 BC000048	37280	-	TSC_hg19_v1_chr15_-_41099672 AK308858 AK309307 AK310140 NM_018163	37301	-	NM_001130448|C15orf62|643338|chromosome 15 open reading frame 62##BC027487|C15orf62|643338|chromosome 15 open reading frame 62##AK291344|C15orf62|643338|chromosome 15 open reading frame 62##AK223430|GCHFR|2644|GTP cyclohydrolase I feedback regulator##AK311872|GCHFR|2644|GTP cyclohydrolase I feedback regulator##NM_005258|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112262|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112264|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC143904|GCHFR|2644|GTP cyclohydrolase I feedback regulator##HQ258032|GCHFR|2644|GTP cyclohydrolase I feedback regulator##AK001441|FAM82A2|55177|family with sequence similarity 82, member A2##NM_018145|FAM82A2|55177|family with sequence similarity 82, member A2##AK123192|FAM82A2|55177|family with sequence similarity 82, member A2##NM_001077268|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AK122779|ZFYVE19|84936|zinc finger, FYVE domain containing 19##BC015738|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AF445414|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AK001496|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##AK308659|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##BC000048|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##AK308858|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##AK309307|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##AK310140|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##NM_018163|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17	0.010184	
chr15	41186190	41186370	reg1001968.p1	4.915	+	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	-19833	-	TSC_hg19_v1_chr15_+_41136676 NM_001032367 AK303899 BC004140 BT007425 CU676280 DQ890747 DQ892293 DQ895493	-49579	+	TSC_hg19_v1_chr15_+_41136245 AK314825 AK300195 NM_003710 NM_181642 BC018702 AY358969 AB000095 AY296715	-49930	+	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	420	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	35418	+	NM_001142776 NM_024111 TSC_hg19_v1_chr15_+_41245671 BC019625 BC001683 BC001847 AY702027	59424	+	AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)##NM_001142776|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##NM_024111|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC019625|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001683|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001847|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AY702027|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)	0.010588	
chr19	7197295	7197475	reg1019783.p2	4.915	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-97834	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-127670	+	AK315405 NM_001044387 NM_001044388 NM_024341	-127923	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	96575	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	262622	+	TSC_hg19_v1_chr19_+_7460061 AB011093	262692	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr2	181971704	181971812	reg1021173.p2	4.915	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-125931	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-126115	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-126388	+	NM_000885	349860	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	350292	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	350564	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.0	
chrX	13110618	13110775	reg1013379.p1	4.915	+	BX647580 AK313776 AF494345 BX648111 BX648919 NM_174901	-47878	-	TSC_hg19_v1_chrX_+_12994293 BC104464 BC104465 BT007090 X02493	-116353	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	-117456	+	AB050195 TSC_hg19_v1_chrX_-_13338140 BC137186 BC137187	227442	-	AK302365 NM_001135995	227821	-	TSC_hg19_v1_chrX_-_13397507 D28370	286809	-	BX647580|FAM9C|171484|family with sequence similarity 9, member C##AK313776|FAM9C|171484|family with sequence similarity 9, member C##AF494345|FAM9C|171484|family with sequence similarity 9, member C##BX648111|FAM9C|171484|family with sequence similarity 9, member C##BX648919|FAM9C|171484|family with sequence similarity 9, member C##NM_174901|FAM9C|171484|family with sequence similarity 9, member C##BC104464|TMSB4X|7114|thymosin beta 4, X-linked##BC104465|TMSB4X|7114|thymosin beta 4, X-linked##BT007090|TMSB4X|7114|thymosin beta 4, X-linked##X02493|TMSB4X|7114|thymosin beta 4, X-linked##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked##AB050195|ATXN3L|92552|ataxin 3-like##BC137186|ATXN3L|92552|ataxin 3-like##BC137187|ATXN3L|92552|ataxin 3-like##AK302365|ATXN3L|92552|ataxin 3-like##NM_001135995|ATXN3L|92552|ataxin 3-like	0.740427	CTCF.p2:36:0.740
chr10	44516136	44516254	reg1025860.p1	4.914	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-371889	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-371990	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-414298	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	364304	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	890523	+	AK056518 TSC_hg19_v1_chr10_-_45455156	938952	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.0	
chr11	102451098	102451231	reg1027407.p2	4.914	+	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	-49705	-	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-127551	-	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-233136	+	AB527354 NM_004771 Y12779	44891	-	AB527320 AF195192 AY358752 NM_022122	125291	-	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	144489	-	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	0.0	
chr1	184387781	184387861	reg1045216.p1	4.914	+	TSC_hg19_v1_chr1_+_184356377 AK056487	-31433	+	AF312864 TSC_hg19_v1_chr1_+_184356245 AY258286	-31555	+	TSC_hg19_v1_chr1_+_184356194 BC028567	-31624	+	BC144149 BC144150 AF288393 TSC_hg19_v1_chr1_-_184723746 AB385131	335936	-	TSC_hg19_v1_chr1_-_184723964 BC070173 BC105586	336144	-	AK225171 TSC_hg19_v1_chr1_-_184723985 AK315118	336163	-	AK056487|C1orf21|81563|chromosome 1 open reading frame 21##AF312864|C1orf21|81563|chromosome 1 open reading frame 21##AY258286|C1orf21|81563|chromosome 1 open reading frame 21##BC028567|C1orf21|81563|chromosome 1 open reading frame 21##BC144149|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC144150|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AF288393|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC070173|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC105586|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK225171|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK315118|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3	0.0	
chr17	79204417	79204484	reg1029520.p2	4.914	+	TSC_hg19_v1_chr17_-_79196766 BC136578 BC136580 BC144263 BC012130 NM_001009811 NM_014984 AB029041	-7684	-	AK131529 NM_001080395 TSC_hg19_v1_chr17_-_79139926	-64545	-	AB014541 NM_004920 TSC_hg19_v1_chr17_-_79105774	-98688	-	TSC_hg19_v1_chr17_-_79212861 AK128728 BC064483 BC042155 AK056090	8373	-	TSC_hg19_v1_chr17_-_79212892 NM_144679	8439	-	BC141912 BC127837 NM_001086521 TSC_hg19_v1_chr17_+_79213151 BC079831	8684	+	BC136578|AZI1|22994|5-azacytidine induced 1##BC136580|AZI1|22994|5-azacytidine induced 1##BC144263|AZI1|22994|5-azacytidine induced 1##BC012130|AZI1|22994|5-azacytidine induced 1##NM_001009811|AZI1|22994|5-azacytidine induced 1##NM_014984|AZI1|22994|5-azacytidine induced 1##AB029041|AZI1|22994|5-azacytidine induced 1##AK131529|AATK|9625|apoptosis-associated tyrosine kinase##NM_001080395|AATK|9625|apoptosis-associated tyrosine kinase##AB014541|AATK|9625|apoptosis-associated tyrosine kinase##NM_004920|AATK|9625|apoptosis-associated tyrosine kinase##AK128728|C17orf56|146705|chromosome 17 open reading frame 56##BC064483|C17orf56|146705|chromosome 17 open reading frame 56##BC042155|C17orf56|146705|chromosome 17 open reading frame 56##AK056090|C17orf56|146705|chromosome 17 open reading frame 56##NM_144679|C17orf56|146705|chromosome 17 open reading frame 56##BC127837|C17orf89|284184|chromosome 17 open reading frame 89##NM_001086521|C17orf89|284184|chromosome 17 open reading frame 89##BC079831|C17orf89|284184|chromosome 17 open reading frame 89	0.889719	CTCF.p2:29:0.890
chr6	116966848	116966967	reg1025892.p1	4.914	+	AK299754 NM_001010892 NM_001161664 TSC_hg19_v1_chr6_+_116937643 BC022879 BC106949 AK095293	-29246	+	TSC_hg19_v1_chr6_+_116892710 BC008693 DQ892435 DQ892436 DQ892437 DQ895647 AB528403 CU677453	-74181	+	TSC_hg19_v1_chr6_+_116892666 AK301089 BC012534 AF132958 BC015802	-74240	+	TSC_hg19_v1_chr6_-_116989930 BX537872 BC016879 AK054582 AK307523 NM_145062	23029	-	TSC_hg19_v1_chr6_+_117002373 NM_002269 AK314206 BC047409	35460	+	TSC_hg19_v1_chr6_-_117086883 BC038997 NM_001085480	119954	-	AK299754|RSPH4A|345895|radial spoke head 4 homolog A (Chlamydomonas)##NM_001010892|RSPH4A|345895|radial spoke head 4 homolog A (Chlamydomonas)##NM_001161664|RSPH4A|345895|radial spoke head 4 homolog A (Chlamydomonas)##BC022879|RSPH4A|345895|radial spoke head 4 homolog A (Chlamydomonas)##BC106949|RSPH4A|345895|radial spoke head 4 homolog A (Chlamydomonas)##AK095293|RSPH4A|345895|radial spoke head 4 homolog A (Chlamydomonas)##BC008693|RWDD1|51389|RWD domain containing 1##DQ892435|RWDD1|51389|RWD domain containing 1##DQ892436|RWDD1|51389|RWD domain containing 1##DQ892437|RWDD1|51389|RWD domain containing 1##DQ895647|RWDD1|51389|RWD domain containing 1##AK301089|RWDD1|51389|RWD domain containing 1##BC012534|RWDD1|51389|RWD domain containing 1##AF132958|RWDD1|51389|RWD domain containing 1##BC015802|RWDD1|51389|RWD domain containing 1##BX537872|ZUFSP|221302|zinc finger with UFM1-specific peptidase domain##BC016879|ZUFSP|221302|zinc finger with UFM1-specific peptidase domain##AK054582|ZUFSP|221302|zinc finger with UFM1-specific peptidase domain##AK307523|ZUFSP|221302|zinc finger with UFM1-specific peptidase domain##NM_145062|ZUFSP|221302|zinc finger with UFM1-specific peptidase domain##NM_002269|KPNA5|3841|karyopherin alpha 5 (importin alpha 6)##AK314206|KPNA5|3841|karyopherin alpha 5 (importin alpha 6)##BC047409|KPNA5|3841|karyopherin alpha 5 (importin alpha 6)##BC038997|FAM162B|221303|family with sequence similarity 162, member B##NM_001085480|FAM162B|221303|family with sequence similarity 162, member B	0.380239	CTCF.p2:0:0.380
chrX	50646769	50646916	reg1030798.p1	4.914	+	TSC_hg19_v1_chrX_-_50557118 AB033028 BC151240 NM_020717	-89731	-	TSC_hg19_v1_chrX_-_50386679 AY044234	-260165	-	TSC_hg19_v1_chrX_-_50213589 BC137319 BC137320 NM_001013742 AB183864	-433180	-	BC117264 BC117266 NM_005448 BC069155 HQ258214	6916	+	AF469196 NM_153183	428240	+	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	428861	+	AB033028|SHROOM4|57477|shroom family member 4##BC151240|SHROOM4|57477|shroom family member 4##NM_020717|SHROOM4|57477|shroom family member 4##AY044234|SHROOM4|57477|shroom family member 4##BC137319|DGKK|139189|diacylglycerol kinase, kappa##BC137320|DGKK|139189|diacylglycerol kinase, kappa##NM_001013742|DGKK|139189|diacylglycerol kinase, kappa##AB183864|DGKK|139189|diacylglycerol kinase, kappa##BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10	0.99359	CTCF.p2:-9:0.994
chr10	119262757	119262898	reg1028789.p1	4.913	+	CU688476 TSC_hg19_v1_chr10_-_119134939 BC012186 BC028375 NM_173791 AK091746 AX747159 BC033019	-127946	-	NM_003054 BC030593 TSC_hg19_v1_chr10_+_119000626 AK314997 L23205 L09118 X71354 L14269 BC108927 BC108928	-262177	+	AB087138 AB464053 NM_181840	-305828	+	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	39089	-	AF301598 NM_001165924 NM_004098	39128	+	TSC_hg19_v1_chr10_+_119302713 AB463605	39916	+	BC012186|PDZD8|118987|PDZ domain containing 8##BC028375|PDZD8|118987|PDZ domain containing 8##NM_173791|PDZD8|118987|PDZ domain containing 8##AK091746|PDZD8|118987|PDZ domain containing 8##BC033019|PDZD8|118987|PDZ domain containing 8##NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AB087138|KCNK18|338567|potassium channel, subfamily K, member 18##NM_181840|KCNK18|338567|potassium channel, subfamily K, member 18##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AF301598|EMX2|2018|empty spiracles homeobox 2##NM_001165924|EMX2|2018|empty spiracles homeobox 2##NM_004098|EMX2|2018|empty spiracles homeobox 2	0.080859	
chr10	35113881	35114013	reg1028169.p2	4.913	+	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	-9796	-	TSC_hg19_v1_chr10_-_33623996 BX648025	-1489949	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1490133	-	AK310225 AK300491 NM_001198778 NM_001198779	249265	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	265325	-	TSC_hg19_v1_chr10_-_35379513 BC095405 BC110901 AL832733 AK095217 NM_001198777	265577	-	AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2##BC095405|CUL2|8453|cullin 2##BC110901|CUL2|8453|cullin 2##AL832733|CUL2|8453|cullin 2##AK095217|CUL2|8453|cullin 2##NM_001198777|CUL2|8453|cullin 2	0.465513	CTCF.p2:49:0.273
chr11_gl000202_random	10344	10468	reg1032929.p1	4.913	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.971151	CTCF.p2:2:0.971
chr4	113438435	113438561	reg1030136.p2	4.913	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	-1166	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	-219971	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	-231497	-	TSC_hg19_v1_chr4_-_113558057 BC044799 BC028584 AK002193	119548	-	NM_016648	119621	+	TSC_hg19_v1_chr4_-_113558120 AK302613 AK299831 NM_018392	119637	-	BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC044799|C4orf21|55345|chromosome 4 open reading frame 21##BC028584|C4orf21|55345|chromosome 4 open reading frame 21##AK002193|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7##AK302613|C4orf21|55345|chromosome 4 open reading frame 21##AK299831|C4orf21|55345|chromosome 4 open reading frame 21##NM_018392|C4orf21|55345|chromosome 4 open reading frame 21	0.0	
chr8	127881761	127881867	reg1030825.p1	4.913	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-311090	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-311259	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-918401	-	DQ486513 NM_001159542	546042	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	866511	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	866676	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.488319	CTCF.p2:-7:0.488
chr8	74659285	74659378	reg1025816.p1	4.913	+	TSC_hg19_v1_chr8_-_74659103 AK294466 CR627442 NM_001164380 NM_001164381 NM_001164382 NM_001164383 NM_001164385 NM_014393	-173	-	Y19062 TSC_hg19_v1_chr8_-_74659076 AB210014 AL079285 AK002152 AK126149 AK293496 AK303104 AK314617 BC008369 BC008370	-264	-	TSC_hg19_v1_chr8_+_74207135 AF456765 BC067131 AY358270	-452062	+	TSC_hg19_v1_chr8_-_74659707 AK307841 AK293729	365	-	AK290141 NM_001164384	611	-	TSC_hg19_v1_chr8_-_74791061 AK001873 AK021735 BC010900 EU446497 BX538145	131729	-	AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK126149|LOC729696|729696|uncharacterized LOC729696##AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)##BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)##AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)##AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK290141|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164384|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK001873|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)##AK021735|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)##BC010900|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)##EU446497|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)##BX538145|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)	0.985157	CTCF.p2:-2:0.985
chr11	63916339	63916439	reg1005104.p2	4.912	+	AY358308 BC018370 NM_013280	-45089	+	TSC_hg19_v1_chr11_+_63754327 AK307413	-162076	+	BC010368 BC107701 TSC_hg19_v1_chr11_+_63753917 AK303228 AF161381 AK225133 AL096714 AK091830 BC007519 AY177200 CU675687 CU679683	-162469	+	AF086206 BC003188 TSC_hg19_v1_chr11_-_63933439	16932	-	TSC_hg19_v1_chr11_-_63933585 AF202922 BC000270 BC007297 BC008316 NM_014067	17166	-	NM_006819 TSC_hg19_v1_chr11_+_63953613	37216	+	AY358308|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##BC018370|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##NM_013280|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AF086206|MACROD1|28992|MACRO domain containing 1##BC003188|MACROD1|28992|MACRO domain containing 1##AF202922|MACROD1|28992|MACRO domain containing 1##BC000270|MACROD1|28992|MACRO domain containing 1##BC007297|MACROD1|28992|MACRO domain containing 1##BC008316|MACROD1|28992|MACRO domain containing 1##NM_014067|MACROD1|28992|MACRO domain containing 1##NM_006819|STIP1|10963|stress-induced-phosphoprotein 1	0.999812	
chr1	177324856	177324951	reg1022670.p1	4.912	+	AB051534 AB161694 BC028036 NM_021165	-184322	+	AK296524 TSC_hg19_v1_chr1_+_177140093	-184825	+	TSC_hg19_v1_chr1_-_177134042 AK309094	-190828	-	AB063357 NM_033127 TSC_hg19_v1_chr1_-_177939202	614223	-	BC009106 TSC_hg19_v1_chr1_-_177939393	614467	-	TSC_hg19_v1_chr1_-_178007060 AK092831 BX538051 AB067515	682196	-	AB051534|FAM5B|57795|family with sequence similarity 5, member B##AB161694|FAM5B|57795|family with sequence similarity 5, member B##BC028036|FAM5B|57795|family with sequence similarity 5, member B##NM_021165|FAM5B|57795|family with sequence similarity 5, member B##AK296524|FAM5B|57795|family with sequence similarity 5, member B##AK309094|ASTN1|460|astrotactin 1##AB063357|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##NM_033127|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##BC009106|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AK092831|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##BX538051|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene	0.95791	CTCF.p2:9:0.958
chr1	30705295	30705388	reg1025880.p1	4.912	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-1142293	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-1147894	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-1147961	-	TSC_hg19_v1_chr1_+_31191648 AK057725	486290	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	491091	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	525291	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	0.486432	CTCF.p2:2:0.486
chr5	170236684	170236774	reg1027631.p1	4.912	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	-25975	+	TSC_hg19_v1_chr5_+_169931023 BC035032 NM_001034837 NM_014592	-305694	+	BC025707 NM_004137 AK313979	-420082	-	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	52202	+	TSC_hg19_v1_chr5_+_170289029 AJ271459 AJ288952 AJ288953 AJ288954 AJ288955 BC030953 AF222747 AB527205 AL832980	52293	+	BC017291 NM_021025 DQ892654 DQ895893 DQ896085	499599	+	AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC035032|KCNIP1|30820|Kv channel interacting protein 1##NM_001034837|KCNIP1|30820|Kv channel interacting protein 1##NM_014592|KCNIP1|30820|Kv channel interacting protein 1##BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17##AJ271459|RANBP17|64901|RAN binding protein 17##AJ288952|RANBP17|64901|RAN binding protein 17##AJ288953|RANBP17|64901|RAN binding protein 17##AJ288954|RANBP17|64901|RAN binding protein 17##AJ288955|RANBP17|64901|RAN binding protein 17##BC030953|RANBP17|64901|RAN binding protein 17##AF222747|RANBP17|64901|RAN binding protein 17##AL832980|RANBP17|64901|RAN binding protein 17##BC017291|TLX3|30012|T-cell leukemia homeobox 3##NM_021025|TLX3|30012|T-cell leukemia homeobox 3##DQ892654|TLX3|30012|T-cell leukemia homeobox 3##DQ895893|TLX3|30012|T-cell leukemia homeobox 3##DQ896085|TLX3|30012|T-cell leukemia homeobox 3	0.963783	CTCF.p2:11:0.964
chr6	120301101	120301274	reg1028196.p1	4.912	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-630266	-	BX538186 AK091682 AX747126 NM_001100411	-830841	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-901279	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	1354456	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	1455638	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	2419508	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.194599	
chr7	10688912	10689030	reg1030575.p1	4.912	+	AK315141 TSC_hg19_v1_chr7_+_8474016 AK091655 BC047505 AK296248	-2214851	+	AB047362 AB073665 NM_152745 TSC_hg19_v1_chr7_+_8473633	-2215361	+	TSC_hg19_v1_chr7_+_8473238 AK095624	-2215733	+	CR407618 CR541716 TSC_hg19_v1_chr7_-_10979730 AF201077 BC101794 BC101796	290738	-	AK130950 TSC_hg19_v1_chr7_-_10979760 AK024837 U94586 BC105295 NM_002489	290813	-	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	324539	+	AK315141|NXPH1|30010|neurexophilin 1##AK091655|NXPH1|30010|neurexophilin 1##BC047505|NXPH1|30010|neurexophilin 1##AK296248|NXPH1|30010|neurexophilin 1##AB047362|NXPH1|30010|neurexophilin 1##AB073665|NXPH1|30010|neurexophilin 1##NM_152745|NXPH1|30010|neurexophilin 1##AK095624|NXPH1|30010|neurexophilin 1##CR407618|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR541716|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AF201077|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101794|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101796|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK130950|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK024837|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##U94586|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC105295|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_002489|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14	0.899684	CTCF.p2:-26:0.900
chr7	140375213	140375339	reg1029791.p1	4.912	+	TSC_hg19_v1_chr7_+_140372910 AF131745 AY302592 NM_052853 BC014107	-2338	+	AB033103 TSC_hg19_v1_chr7_-_140340614	-34666	-	BC132875 BC144190 NM_015689	-72950	-	TSC_hg19_v1_chr7_+_140396507 AF067166 NM_004546 AF050639 BC063026 BC001168 CR542121	21227	+	TSC_hg19_v1_chr7_-_140624512 AB529216 AK314346 BC101757 BC112079 M95712 NM_004333	249231	-	AF151897 AK024776 NM_016071	339191	-	AF131745|ADCK2|90956|aarF domain containing kinase 2##AY302592|ADCK2|90956|aarF domain containing kinase 2##NM_052853|ADCK2|90956|aarF domain containing kinase 2##BC014107|ADCK2|90956|aarF domain containing kinase 2##AB033103|DENND2A|27147|DENN/MADD domain containing 2A##BC132875|DENND2A|27147|DENN/MADD domain containing 2A##BC144190|DENND2A|27147|DENN/MADD domain containing 2A##NM_015689|DENND2A|27147|DENN/MADD domain containing 2A##AF067166|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##NM_004546|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF050639|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC063026|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC001168|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##CR542121|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AK314346|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC101757|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC112079|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##M95712|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##NM_004333|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##AF151897|MRPS33|51650|mitochondrial ribosomal protein S33##AK024776|MRPS33|51650|mitochondrial ribosomal protein S33##NM_016071|MRPS33|51650|mitochondrial ribosomal protein S33	0.0	
chrX	46488464	46488592	reg1030085.p2	4.912	+	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	-55250	+	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	-83584	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	-83672	-	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	130001	-	TSC_hg19_v1_chrX_-_46618608 BC094742	130102	-	NM_006915 AJ007590 TSC_hg19_v1_chrX_+_46696391 BC027851	207849	+	NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##BC094742|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	0.0	
chr10	130066375	130066532	reg1036126.p1	4.911	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-141925	-	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	-220599	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-360998	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	1199018	+	TSC_hg19_v1_chr10_+_131265507 BC000824	1199061	+	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	1695600	-	NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3	0.351745	CTCF.p2:-13:0.352
chr11	68925131	68925198	reg1030618.p2	4.911	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-67638	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-108738	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-108814	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	136458	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	530692	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	530746	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.0	
chr16	70616656	70616771	reg1030078.p2	4.911	+	NM_001172771 NM_152456	-2916	+	TSC_hg19_v1_chr16_+_70557732 D87686 BC068974	-58965	+	BC009780 TSC_hg19_v1_chr16_+_70557724	-58989	+	NM_001172772	41181	+	BC002770 TSC_hg19_v1_chr16_-_70713956	97230	-	AB115770 TSC_hg19_v1_chr16_-_70719700	102985	-	NM_001172771|IL34|146433|interleukin 34##NM_152456|IL34|146433|interleukin 34##D87686|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##BC068974|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##BC009780|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##NM_001172772|IL34|146433|interleukin 34##BC002770|MTSS1L|92154|metastasis suppressor 1-like##AB115770|MTSS1L|92154|metastasis suppressor 1-like	0.870848	CTCF.p2:3:0.871
chr4	161096575	161096728	reg1029205.p2	4.911	+	AK294459 NM_014247	-907654	+	AK058100 NM_152543	-1140319	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-1406366	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	1988500	-	TSC_hg19_v1_chr4_-_164088002 AK097352	2991341	-	TSC_hg19_v1_chr4_-_164088043 AK308601	2991386	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.92548	CTCF.p2:-4:0.925
chr7	40174201	40174381	reg1017174.p1	4.911	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	-160	-	AJ297709 AJ297710 TSC_hg19_v1_chr7_+_39990171	-184150	+	TSC_hg19_v1_chr7_+_39989958 AK092534 NM_003718 NM_031267	-184332	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	240	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	318	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	1568394	-	BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AJ297709|CDK13|8621|cyclin-dependent kinase 13##AJ297710|CDK13|8621|cyclin-dependent kinase 13##AK092534|CDK13|8621|cyclin-dependent kinase 13##NM_003718|CDK13|8621|cyclin-dependent kinase 13##NM_031267|CDK13|8621|cyclin-dependent kinase 13##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A	0.0	
chr13	38177075	38177170	reg1025206.p2	4.910	+	EU262883 EU262884 EU262885 EU262886 AY140646 AY918092 BC106709 BC106710 D13666 GU354210 D13665 TSC_hg19_v1_chr13_-_38172906 NM_001135934 NM_001135935 NM_001135936 NM_006475	-4201	-	BC028723 NM_145203	-497322	-	AK292376 TSC_hg19_v1_chr13_-_37633791 AF445026 AF093250 AK225376 AJ130894 BC001145 AK304227 BC030686 NM_001014286 NM_017569	-543409	-	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	266776	-	NM_016617 TSC_hg19_v1_chr13_+_38923946	746829	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	746927	+	EU262883|POSTN|10631|periostin, osteoblast specific factor##EU262884|POSTN|10631|periostin, osteoblast specific factor##EU262885|POSTN|10631|periostin, osteoblast specific factor##EU262886|POSTN|10631|periostin, osteoblast specific factor##AY140646|POSTN|10631|periostin, osteoblast specific factor##AY918092|POSTN|10631|periostin, osteoblast specific factor##BC106709|POSTN|10631|periostin, osteoblast specific factor##BC106710|POSTN|10631|periostin, osteoblast specific factor##D13666|POSTN|10631|periostin, osteoblast specific factor##GU354210|POSTN|10631|periostin, osteoblast specific factor##D13665|POSTN|10631|periostin, osteoblast specific factor##NM_001135934|POSTN|10631|periostin, osteoblast specific factor##NM_001135935|POSTN|10631|periostin, osteoblast specific factor##NM_001135936|POSTN|10631|periostin, osteoblast specific factor##NM_006475|POSTN|10631|periostin, osteoblast specific factor##BC028723|CSNK1A1L|122011|casein kinase 1, alpha 1-like##NM_145203|CSNK1A1L|122011|casein kinase 1, alpha 1-like##AK292376|FAM48A|55578|family with sequence similarity 48, member A##AF445026|FAM48A|55578|family with sequence similarity 48, member A##AF093250|FAM48A|55578|family with sequence similarity 48, member A##AK225376|FAM48A|55578|family with sequence similarity 48, member A##AJ130894|FAM48A|55578|family with sequence similarity 48, member A##BC001145|FAM48A|55578|family with sequence similarity 48, member A##AK304227|FAM48A|55578|family with sequence similarity 48, member A##BC030686|FAM48A|55578|family with sequence similarity 48, member A##NM_001014286|FAM48A|55578|family with sequence similarity 48, member A##NM_017569|FAM48A|55578|family with sequence similarity 48, member A##BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1	0.330993	CTCF.p2:-3:0.331
chr14	95731836	95732016	reg1022774.p1	4.910	+	TSC_hg19_v1_chr14_+_95624023 BC040596	-107905	+	TSC_hg19_v1_chr14_-_95623867 BC046934 AB023145 BC150287 NM_177438	-108134	-	AY929254 AY929255 AY929256 TSC_hg19_v1_chr14_-_95623633	-108304	-	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	54257	-	AK131436 BC146604 BX248076 NM_152592	210178	-	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	269089	-	BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC046934|DICER1|23405|dicer 1, ribonuclease type III##AB023145|DICER1|23405|dicer 1, ribonuclease type III##BC150287|DICER1|23405|dicer 1, ribonuclease type III##NM_177438|DICER1|23405|dicer 1, ribonuclease type III##AY929254|DICER1|23405|dicer 1, ribonuclease type III##AY929255|DICER1|23405|dicer 1, ribonuclease type III##AY929256|DICER1|23405|dicer 1, ribonuclease type III##AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)	0.0	
chr17	29535860	29535931	reg1037462.p2	4.910	+	TSC_hg19_v1_chr17_+_29421994 AK289936 M82814 M89914 BC144643 D42072	-113786	+	TSC_hg19_v1_chr17_+_29421944 D12625 NM_000267 NM_001042492 NM_001128147	-113951	+	TSC_hg19_v1_chr17_+_29298062 AK226030 BC082262 AK312979 AK122646 AK122709 AB470605 AY598332	-237755	+	X51694 BC018050 AK222663 AK312445 NM_002544	88419	-	AK312822 TSC_hg19_v1_chr17_-_29641073	105176	-	TSC_hg19_v1_chr17_-_29641092 BC005926	105194	-	AK289936|NF1|4763|neurofibromin 1##M82814|NF1|4763|neurofibromin 1##M89914|NF1|4763|neurofibromin 1##BC144643|NF1|4763|neurofibromin 1##D42072|NF1|4763|neurofibromin 1##D12625|NF1|4763|neurofibromin 1##NM_000267|NF1|4763|neurofibromin 1##NM_001042492|NF1|4763|neurofibromin 1##NM_001128147|NF1|4763|neurofibromin 1##AK226030|RNF135|84282|ring finger protein 135##BC082262|RNF135|84282|ring finger protein 135##AK312979|RNF135|84282|ring finger protein 135##AK122646|RNF135|84282|ring finger protein 135##AK122709|RNF135|84282|ring finger protein 135##AB470605|RNF135|84282|ring finger protein 135##AY598332|RNF135|84282|ring finger protein 135##X51694|OMG|4974|oligodendrocyte myelin glycoprotein##BC018050|OMG|4974|oligodendrocyte myelin glycoprotein##AK222663|OMG|4974|oligodendrocyte myelin glycoprotein##AK312445|OMG|4974|oligodendrocyte myelin glycoprotein##NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein##AK312822|EVI2B|2124|ecotropic viral integration site 2B##BC005926|EVI2B|2124|ecotropic viral integration site 2B	0.0	
chr6	44437627	44437754	reg1024545.p1	4.910	+	TSC_hg19_v1_chr6_+_44355461 AK128737 AK299738 BC001568 AB007892 AB590067 CU674768 DQ891623 DQ894814 U86753	-82190	+	NM_001253 TSC_hg19_v1_chr6_+_44355294	-82418	+	NM_145026 AK058171	-127250	+	NM_001015051 NM_001024630 AF053952	858366	+	AF073930 NM_003599 TSC_hg19_v1_chr6_-_45345614 AK303838 BC035816 BC050384 NM_181356 AK313874	907985	-	TSC_hg19_v1_chr6_+_45389825 NM_004348	952175	+	AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_001253|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_145026|SPATS1|221409|spermatogenesis associated, serine-rich 1##AK058171|SPATS1|221409|spermatogenesis associated, serine-rich 1##NM_001015051|RUNX2|860|runt-related transcription factor 2##NM_001024630|RUNX2|860|runt-related transcription factor 2##AF053952|RUNX2|860|runt-related transcription factor 2##AF073930|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_003599|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK303838|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC035816|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC050384|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_181356|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK313874|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_004348|RUNX2|860|runt-related transcription factor 2	0.593145	CTCF.p2:33:0.593
chr8	74566344	74566465	reg1028845.p2	4.910	+	TSC_hg19_v1_chr8_+_74207135 AF456765 BC067131 AY358270	-359135	+	TSC_hg19_v1_chr8_+_74206836 NM_172037	-359595	+	CR456773 L16558 AB529035 BC071671 BC071895 BC087837 BC071894 BC001476 BC006095 X57959 AB055763 AK225246 AK225254 AK291119 AK313365 X52967 BC009599 NM_000971	-360547	-	Y19062 TSC_hg19_v1_chr8_-_74659076 AB210014 AL079285 AK002152 AK126149 AK293496 AK303104 AK314617 BC008369 BC008370	92663	-	TSC_hg19_v1_chr8_-_74659103 AK294466 CR627442 NM_001164380 NM_001164381 NM_001164382 NM_001164383 NM_001164385 NM_014393	92754	-	TSC_hg19_v1_chr8_-_74659707 AK307841 AK293729	93292	-	AF456765|RDH10|157506|retinol dehydrogenase 10 (all-trans)##BC067131|RDH10|157506|retinol dehydrogenase 10 (all-trans)##AY358270|RDH10|157506|retinol dehydrogenase 10 (all-trans)##NM_172037|RDH10|157506|retinol dehydrogenase 10 (all-trans)##CR456773|RPL7|6129|ribosomal protein L7##L16558|RPL7|6129|ribosomal protein L7##BC071671|RPL7|6129|ribosomal protein L7##BC071895|RPL7|6129|ribosomal protein L7##BC087837|RPL7|6129|ribosomal protein L7##BC071894|RPL7|6129|ribosomal protein L7##BC006095|RPL7|6129|ribosomal protein L7##X57959|RPL7|6129|ribosomal protein L7##AK225246|RPL7|6129|ribosomal protein L7##AK225254|RPL7|6129|ribosomal protein L7##AK291119|RPL7|6129|ribosomal protein L7##AK313365|RPL7|6129|ribosomal protein L7##X52967|RPL7|6129|ribosomal protein L7##BC009599|RPL7|6129|ribosomal protein L7##NM_000971|RPL7|6129|ribosomal protein L7##Y19062|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AB210014|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AL079285|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK002152|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK126149|LOC729696|729696|uncharacterized LOC729696##AK293496|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK303104|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK314617|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008369|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##BC008370|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)	0.758522	CTCF.p2:14:0.759
chr9	35911008	35911109	reg1027859.p1	4.910	+	AY358408 NM_001039792	-4870	+	AY726589 NM_001004487 BC136715 BC136716	-40670	-	TSC_hg19_v1_chr9_+_35829375 BC064951 NM_001042590 BC082765	-81580	+	HQ258184 BC104869 BC113651 NM_019897	47064	-	TSC_hg19_v1_chr9_+_36036901 AK292653 NM_021111 AK315073 BC050306 BC032240 BC060806 BC137093 CU687432	125889	+	TSC_hg19_v1_chr9_+_36136731 AK074488 BC017918 AK075091 AK298741 AK307243 CR749781 AY039756 NM_022343	225674	+	AY358408|HRCT1|646962|histidine rich carboxyl terminus 1##NM_001039792|HRCT1|646962|histidine rich carboxyl terminus 1##AY726589|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##NM_001004487|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136715|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136716|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC064951|TMEM8B|51754|transmembrane protein 8B##NM_001042590|TMEM8B|51754|transmembrane protein 8B##BC082765|TMEM8B|51754|transmembrane protein 8B##HQ258184|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC104869|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC113651|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##NM_019897|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK074488|GLIPR2|152007|GLI pathogenesis-related 2##BC017918|GLIPR2|152007|GLI pathogenesis-related 2##AK075091|GLIPR2|152007|GLI pathogenesis-related 2##AK298741|GLIPR2|152007|GLI pathogenesis-related 2##AK307243|GLIPR2|152007|GLI pathogenesis-related 2##CR749781|GLIPR2|152007|GLI pathogenesis-related 2##AY039756|GLIPR2|152007|GLI pathogenesis-related 2##NM_022343|GLIPR2|152007|GLI pathogenesis-related 2	0.745049	CTCF.p2:9:0.745
chr1	104491263	104491387	reg1029241.p1	4.909	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-198823	+	NM_001008221 AK292341	-199047	+	AK292341 NM_001008221	-252254	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	3108040	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	3191417	+	AB023193 TSC_hg19_v1_chr1_+_107683657	3192279	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.946727	CTCF.p2:1:0.947
chr11	6724816	6724922	reg1028668.p1	4.909	+	TSC_hg19_v1_chr11_-_6704541 CR457177 DQ891581 DQ894774 DQ895036 AB463889 BC012306 AK026857 AF164797 AF141338 NM_022061	-20295	-	TSC_hg19_v1_chr11_-_6676982 AB053446 NM_003737	-47906	-	TSC_hg19_v1_chr11_-_6643809 BC038382	-81008	-	NM_001004490 BC140734	65367	-	BC151143 NM_001004489	81378	+	BC101489 BC101491 NM_003696	92206	-	CR457177|MRPL17|63875|mitochondrial ribosomal protein L17##DQ891581|MRPL17|63875|mitochondrial ribosomal protein L17##DQ894774|MRPL17|63875|mitochondrial ribosomal protein L17##DQ895036|MRPL17|63875|mitochondrial ribosomal protein L17##BC012306|MRPL17|63875|mitochondrial ribosomal protein L17##AK026857|MRPL17|63875|mitochondrial ribosomal protein L17##AF164797|MRPL17|63875|mitochondrial ribosomal protein L17##AF141338|MRPL17|63875|mitochondrial ribosomal protein L17##NM_022061|MRPL17|63875|mitochondrial ribosomal protein L17##AB053446|DCHS1|8642|dachsous 1 (Drosophila)##NM_003737|DCHS1|8642|dachsous 1 (Drosophila)##BC038382|DCHS1|8642|dachsous 1 (Drosophila)##NM_001004490|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC140734|OR2AG2|338755|olfactory receptor, family 2, subfamily AG, member 2##BC151143|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##NM_001004489|OR2AG1|144125|olfactory receptor, family 2, subfamily AG, member 1##BC101489|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##BC101491|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2##NM_003696|OR6A2|8590|olfactory receptor, family 6, subfamily A, member 2	0.976262	CTCF.p2:12:0.976
chr19	7587261	7587421	reg1028561.p1	4.909	+	TSC_hg19_v1_chr19_+_7580990 NM_018083	-6296	+	NM_198534 AK093103 AX747925 BC029824 BC034779	-24872	+	TSC_hg19_v1_chr19_-_7553914 CU679101 AB095921 BC008780 NM_080662	-33439	-	TSC_hg19_v1_chr19_+_7587531 NM_020533 AF287269 AK294330 BC005149 AK222673 AK310109 AK026102 AF249319 AJ293659 AJ293970 DQ891844 DQ895032 CU675019	219	+	NM_006702 TSC_hg19_v1_chr19_+_7599076 BC050553 AK302462 NM_001166112	11741	+	NM_001166111 TSC_hg19_v1_chr19_+_7599633 AK293807 AK294021 NM_001166113 BC051768	12274	+	NM_018083|ZNF358|140467|zinc finger protein 358##NM_198534|C19orf45|374877|chromosome 19 open reading frame 45##AK093103|C19orf45|374877|chromosome 19 open reading frame 45##BC029824|C19orf45|374877|chromosome 19 open reading frame 45##BC034779|C19orf45|374877|chromosome 19 open reading frame 45##AB095921|PEX11G|92960|peroxisomal biogenesis factor 11 gamma##BC008780|PEX11G|92960|peroxisomal biogenesis factor 11 gamma##NM_080662|PEX11G|92960|peroxisomal biogenesis factor 11 gamma##NM_020533|MCOLN1|57192|mucolipin 1##AF287269|MCOLN1|57192|mucolipin 1##AK294330|MCOLN1|57192|mucolipin 1##BC005149|MCOLN1|57192|mucolipin 1##AK222673|MCOLN1|57192|mucolipin 1##AK310109|MCOLN1|57192|mucolipin 1##AK026102|MCOLN1|57192|mucolipin 1##AF249319|MCOLN1|57192|mucolipin 1##AJ293659|MCOLN1|57192|mucolipin 1##AJ293970|MCOLN1|57192|mucolipin 1##DQ891844|MCOLN1|57192|mucolipin 1##DQ895032|MCOLN1|57192|mucolipin 1##NM_006702|PNPLA6|10908|patatin-like phospholipase domain containing 6##BC050553|PNPLA6|10908|patatin-like phospholipase domain containing 6##AK302462|PNPLA6|10908|patatin-like phospholipase domain containing 6##NM_001166112|PNPLA6|10908|patatin-like phospholipase domain containing 6##NM_001166111|PNPLA6|10908|patatin-like phospholipase domain containing 6##AK293807|PNPLA6|10908|patatin-like phospholipase domain containing 6##AK294021|PNPLA6|10908|patatin-like phospholipase domain containing 6##NM_001166113|PNPLA6|10908|patatin-like phospholipase domain containing 6##BC051768|PNPLA6|10908|patatin-like phospholipase domain containing 6	0.0	
chr3	15170047	15170157	reg1026411.p1	4.909	+	TSC_hg19_v1_chr3_-_15140655 AK291288 AK301735 AL833545 NM_022340	-29449	-	TSC_hg19_v1_chr3_-_15140649 BC032628	-29453	-	AB209673 TSC_hg19_v1_chr3_-_15140645	-29468	-	TSC_hg19_v1_chr3_+_15247736 NM_014296	77632	+	TSC_hg19_v1_chr3_+_15247768 AB028639 BC056202 AK314253 CU691130	77852	+	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	203839	-	AK291288|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AK301735|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AL833545|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_022340|ZFYVE20|64145|zinc finger, FYVE domain containing 20##BC032628|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AB209673|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_014296|CAPN7|23473|calpain 7##AB028639|CAPN7|23473|calpain 7##BC056202|CAPN7|23473|calpain 7##AK314253|CAPN7|23473|calpain 7##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	0.0	
chr4	164509147	164509313	reg1026500.p2	4.909	+	TSC_hg19_v1_chr4_+_164415868 BC011842	-93357	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-93388	+	TSC_hg19_v1_chr4_+_164415817 BC017418 AK298235	-93414	+	AB463878 AK000675 AK301408 NM_017923	25485	-	NM_012403	609632	-	AK289711 NM_001166373	795176	-	BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##BC017418|C4orf43|55319|chromosome 4 open reading frame 43##AK298235|C4orf43|55319|chromosome 4 open reading frame 43##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	0.022049	
chr4	48191891	48192014	reg1028233.p2	4.909	+	BC017829 L27071 NM_003328	-55694	-	TSC_hg19_v1_chr4_+_48018788 BC067881 CR749484 NM_207330 AK095299	-173149	+	X64802 TSC_hg19_v1_chr4_-_48018662	-173315	-	BC101711 BC101713 BC143487 NM_003215 TSC_hg19_v1_chr4_-_48271858	79883	-	BC040993 TSC_hg19_v1_chr4_+_48343485 AK291006	151459	+	TSC_hg19_v1_chr4_+_48343571 BC006139 BC007701 BC012067 NM_020846 AB040891	151661	+	BC017829|TXK|7294|TXK tyrosine kinase##L27071|TXK|7294|TXK tyrosine kinase##NM_003328|TXK|7294|TXK tyrosine kinase##BC067881|NIPAL1|152519|NIPA-like domain containing 1##CR749484|NIPAL1|152519|NIPA-like domain containing 1##NM_207330|NIPAL1|152519|NIPA-like domain containing 1##AK095299|NIPAL1|152519|NIPA-like domain containing 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1##BC101711|TEC|7006|tec protein tyrosine kinase##BC101713|TEC|7006|tec protein tyrosine kinase##BC143487|TEC|7006|tec protein tyrosine kinase##NM_003215|TEC|7006|tec protein tyrosine kinase##BC040993|SLAIN2|57606|SLAIN motif family, member 2##AK291006|SLAIN2|57606|SLAIN motif family, member 2##BC006139|SLAIN2|57606|SLAIN motif family, member 2##BC007701|SLAIN2|57606|SLAIN motif family, member 2##BC012067|SLAIN2|57606|SLAIN motif family, member 2##NM_020846|SLAIN2|57606|SLAIN motif family, member 2##AB040891|SLAIN2|57606|SLAIN motif family, member 2	0.313661	CTCF.p2:-20:0.314
chr5	88604538	88604697	reg1024253.p1	4.909	+	AL833268 AL833274 NM_001131005 NM_001193347	-404723	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-419353	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-419497	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	1100922	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1165565	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1165961	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr9	134505951	134506132	reg1017471.p2	4.909	+	AK057848 TSC_hg19_v1_chr9_-_134406625 BC091495 BC015547 AK022317 NM_001135954 NM_031432	-99391	-	TSC_hg19_v1_chr9_-_134406578 AF254133 CR457281 CU677347 AF237290 AF125106 AK295471 AK307475	-99494	-	AK315218 TSC_hg19_v1_chr9_+_134378402 AK293529 BC022877	-127606	+	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	79161	-	D21239 NM_005312	106883	-	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	109249	-	AK057848|UCK1|83549|uridine-cytidine kinase 1##BC091495|UCK1|83549|uridine-cytidine kinase 1##BC015547|UCK1|83549|uridine-cytidine kinase 1##AK022317|UCK1|83549|uridine-cytidine kinase 1##NM_001135954|UCK1|83549|uridine-cytidine kinase 1##NM_031432|UCK1|83549|uridine-cytidine kinase 1##AF254133|UCK1|83549|uridine-cytidine kinase 1##CR457281|UCK1|83549|uridine-cytidine kinase 1##AF237290|UCK1|83549|uridine-cytidine kinase 1##AF125106|UCK1|83549|uridine-cytidine kinase 1##AK295471|UCK1|83549|uridine-cytidine kinase 1##AK307475|UCK1|83549|uridine-cytidine kinase 1##AK315218|POMT1|10585|protein-O-mannosyltransferase 1##AK293529|POMT1|10585|protein-O-mannosyltransferase 1##BC022877|POMT1|10585|protein-O-mannosyltransferase 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1	0.0	
chr10	73821385	73821490	reg1023921.p2	4.908	+	TSC_hg19_v1_chr10_+_73723993 AB017915 NM_004273 AB012192	-97380	+	TSC_hg19_v1_chr10_-_73611059 NM_001042465 NM_001042466 NM_002778	-210346	-	AK299184 TSC_hg19_v1_chr10_-_73611043	-210394	-	AK292328 TSC_hg19_v1_chr10_-_73848270 AK294008 AK307091	26831	-	TSC_hg19_v1_chr10_-_73848286 AY358921	26845	-	TSC_hg19_v1_chr10_-_73848310 AJ001453	26903	-	AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_001042465|PSAP|5660|prosaposin##NM_001042466|PSAP|5660|prosaposin##NM_002778|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin##AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AY358921|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AJ001453|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	0.40515	CTCF.p2:-10:0.405
chr17	40558052	40558133	reg1000989.p1	4.908	+	TSC_hg19_v1_chr17_-_40540580 AK291933	-17500	-	TSC_hg19_v1_chr17_-_40540493 L29277 NM_003150 NM_139276 AK301200 AK316139	-17560	-	TSC_hg19_v1_chr17_-_40540461 BC014482 NM_213662 BC000627 BC029783 AK297994	-17678	-	AB464659 TSC_hg19_v1_chr17_-_40575275 BC008849 AK298072 AK074512 AK092406 AK298563 AK314389 AX747528 BC066123 NM_012232	17135	-	TSC_hg19_v1_chr17_+_40610864 L78933 NM_001130020 NM_001130021 NM_005177 Z71460	52771	+	BC017826 TSC_hg19_v1_chr17_+_40610895 AK223554 AK299784	52793	+	AK291933|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##L29277|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_003150|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_139276|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK301200|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK316139|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC014482|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##NM_213662|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC000627|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC029783|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##AK297994|STAT3|6774|signal transducer and activator of transcription 3 (acute-phase response factor)##BC008849|PTRF|284119|polymerase I and transcript release factor##AK298072|PTRF|284119|polymerase I and transcript release factor##AK074512|PTRF|284119|polymerase I and transcript release factor##AK092406|PTRF|284119|polymerase I and transcript release factor##AK298563|PTRF|284119|polymerase I and transcript release factor##AK314389|PTRF|284119|polymerase I and transcript release factor##BC066123|PTRF|284119|polymerase I and transcript release factor##NM_012232|PTRF|284119|polymerase I and transcript release factor##L78933|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_001130020|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_001130021|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_005177|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##Z71460|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##BC017826|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK223554|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK299784|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1	0.0	
chr8	65776002	65776148	reg1028647.p1	4.908	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	-64796	-	TSC_hg19_v1_chr8_+_65493611 AK091333	-282411	+	NM_152414 AK293979	-283217	+	TSC_hg19_v1_chr8_-_66546394 AK001373	770320	-	TSC_hg19_v1_chr8_-_66546404 AK304463	770331	-	TSC_hg19_v1_chr8_-_66546413 BC011607 BC018846 NM_018120	770357	-	BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK001373|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1##BC011607|ARMC1|55156|armadillo repeat containing 1##BC018846|ARMC1|55156|armadillo repeat containing 1##NM_018120|ARMC1|55156|armadillo repeat containing 1	0.0	
chr9	82373163	82373271	reg1029623.p2	4.908	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	-185532	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	-185693	+	TSC_hg19_v1_chr9_+_82186879 NM_007005	-186331	+	BC010100 NM_005077	1930378	-	TSC_hg19_v1_chr9_-_84304463 AB209854	1931210	-	NM_001145197 AK125847 AK308327	2170154	+	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC010100|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_005077|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##AB209854|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4##AK125847|FAM75D4|389761|family with sequence similarity 75, member D4##AK308327|FAM75D4|389761|family with sequence similarity 75, member D4	0.33984	CTCF.p2:-2:0.340
chr1	226295653	226295764	reg1027588.p1	4.907	+	TSC_hg19_v1_chr1_+_226271319 BC032899	-24348	+	TSC_hg19_v1_chr1_+_226250433 BC081560 BC081561	-45275	+	TSC_hg19_v1_chr1_+_226250421 AK291102 AK293541 BC029405 BC067757 BC095447 M11354 BC066901	-45282	+	BC039575 TSC_hg19_v1_chr1_-_226374400	78692	-	AY150218 TSC_hg19_v1_chr1_-_226374401 BC045533 BC060792 NM_022735 AK025520 AK314468 AB043587	78709	-	BC111974 BC113441 BC143784 TSC_hg19_v1_chr1_+_226411364 AF211891 NM_031944	115642	+	BC081560|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC081561|H3F3A|3020|H3 histone, family 3A##AK291102|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##AK293541|H3F3A|3020|H3 histone, family 3A##BC029405|H3F3A|3020|H3 histone, family 3A##BC067757|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC095447|H3F3A|3020|H3 histone, family 3A##M11354|H3F3A|3020|H3 histone, family 3A##BC066901|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC039575|ACBD3|64746|acyl-CoA binding domain containing 3##AY150218|ACBD3|64746|acyl-CoA binding domain containing 3##BC045533|ACBD3|64746|acyl-CoA binding domain containing 3##BC060792|ACBD3|64746|acyl-CoA binding domain containing 3##NM_022735|ACBD3|64746|acyl-CoA binding domain containing 3##AK025520|ACBD3|64746|acyl-CoA binding domain containing 3##AK314468|ACBD3|64746|acyl-CoA binding domain containing 3##AB043587|ACBD3|64746|acyl-CoA binding domain containing 3##BC111974|MIXL1|83881|Mix paired-like homeobox##BC113441|MIXL1|83881|Mix paired-like homeobox##BC143784|MIXL1|83881|Mix paired-like homeobox##AF211891|MIXL1|83881|Mix paired-like homeobox##NM_031944|MIXL1|83881|Mix paired-like homeobox	0.0	
chr17	61981251	61981351	reg1024975.p1	4.907	+	BT006926 J00118 BC002717 AK291587 BC005921 BC057768 BC062775 BC020756 NM_001317 M35419	-7350	-	AB451332 AB451477 AF006061 AF006060 M38451 BC020760 J03756 NM_002059 NM_022556 NM_022557 NM_022558 AK312194	-22110	-	V00573 BC119748 BC022044 BC035965 NM_020991 NM_022644 NM_022645	-30259	-	BC119747 BC029365 NM_001318 NM_022579 NM_022580 NM_022581 AX772828	7356	-	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	14865	-	S52229 S79249 X83539 M80461 BC032651 BC002975 BC030210 AX775815 AX775817 AK222954 AK313583 AK223210 NM_000626 NM_001039933 NM_021602 M89957	28365	-	BT006926|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##J00118|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC002717|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##AK291587|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC005921|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC057768|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC062775|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC020756|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##NM_001317|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##AB451332|GH2|2689|growth hormone 2##AB451477|GH2|2689|growth hormone 2##AF006061|GH2|2689|growth hormone 2##AF006060|GH2|2689|growth hormone 2##M38451|GH2|2689|growth hormone 2##BC020760|GH2|2689|growth hormone 2##J03756|GH2|2689|growth hormone 2##NM_002059|GH2|2689|growth hormone 2##NM_022556|GH2|2689|growth hormone 2##NM_022557|GH2|2689|growth hormone 2##NM_022558|GH2|2689|growth hormone 2##AK312194|GH2|2689|growth hormone 2##V00573|CSH2|1443|chorionic somatomammotropin hormone 2##BC119748|CSH2|1443|chorionic somatomammotropin hormone 2##BC022044|CSH2|1443|chorionic somatomammotropin hormone 2##BC035965|CSH2|1443|chorionic somatomammotropin hormone 2##NM_020991|CSH2|1443|chorionic somatomammotropin hormone 2##NM_022644|CSH2|1443|chorionic somatomammotropin hormone 2##NM_022645|CSH2|1443|chorionic somatomammotropin hormone 2##BC119747|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BC029365|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_001318|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022579|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022580|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022581|CSHL1|1444|chorionic somatomammotropin hormone-like 1##M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1##S52229|CD79B|974|CD79b molecule, immunoglobulin-associated beta##S79249|CD79B|974|CD79b molecule, immunoglobulin-associated beta##X83539|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M80461|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC032651|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC002975|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC030210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775815|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775817|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK222954|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK313583|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK223210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_000626|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_001039933|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_021602|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M89957|CD79B|974|CD79b molecule, immunoglobulin-associated beta	0.991911	CTCF.p2:3:0.992
chr6	13303044	13303224	reg1030678.p1	4.907	+	AK091836 AX747210 NM_001242698	-7317	-	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-586091	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-586191	+	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	25566	-	AK027010 NM_001242630	105234	-	AK055131 AF264036 NM_001242628	183264	-	AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AK055131|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF264036|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242628|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr7	134671646	134671827	reg1015528.p3	4.907	+	TSC_hg19_v1_chr7_+_134671258 AK302827 NM_178563 BC030651 AL832281 AK023045 AK311252	-451	+	BC014035 TSC_hg19_v1_chr7_+_134576197 BC061926 BC005006 D90452 D90453	-95463	+	NM_033139 NM_033140 TSC_hg19_v1_chr7_+_134576161	-95581	+	NM_018295 TSC_hg19_v1_chr7_+_134832838 AK001862 AK225055 AK301268 BC020942	161111	+	NM_001243753 NM_001243755	182489	-	TSC_hg19_v1_chr7_-_134855252 NM_001243752	183531	-	AK302827|AGBL3|340351|ATP/GTP binding protein-like 3##NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3##BC030651|AGBL3|340351|ATP/GTP binding protein-like 3##AL832281|AGBL3|340351|ATP/GTP binding protein-like 3##AK023045|AGBL3|340351|ATP/GTP binding protein-like 3##BC014035|CALD1|800|caldesmon 1##BC061926|CALD1|800|caldesmon 1##BC005006|CALD1|800|caldesmon 1##D90452|CALD1|800|caldesmon 1##D90453|CALD1|800|caldesmon 1##NM_033139|CALD1|800|caldesmon 1##NM_033140|CALD1|800|caldesmon 1##NM_018295|TMEM140|55281|transmembrane protein 140##AK001862|TMEM140|55281|transmembrane protein 140##AK225055|TMEM140|55281|transmembrane protein 140##AK301268|TMEM140|55281|transmembrane protein 140##BC020942|TMEM140|55281|transmembrane protein 140##NM_001243753|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243755|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243752|C7orf49|78996|chromosome 7 open reading frame 49	0.0	
chrX	12832877	12833058	reg1001069.p2	4.907	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	-23399	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	-23470	+	AB002314 NM_014728 AK289694	-676377	+	AK313858 BC033651 NM_016562 AF240467 AF245702	52231	+	AK314240 NM_138636 AF246971 AY358296 BC101074 BC101075 BC101076 BC101077 AF245703	91790	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	160273	+	BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7##AK314240|TLR8|51311|toll-like receptor 8##NM_138636|TLR8|51311|toll-like receptor 8##AF246971|TLR8|51311|toll-like receptor 8##AY358296|TLR8|51311|toll-like receptor 8##BC101074|TLR8|51311|toll-like receptor 8##BC101075|TLR8|51311|toll-like receptor 8##BC101076|TLR8|51311|toll-like receptor 8##BC101077|TLR8|51311|toll-like receptor 8##AF245703|TLR8|51311|toll-like receptor 8##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked	0.0	
chr15	79327655	79327776	reg1027854.p2	4.906	+	NM_153815 S62035	-29714	-	TSC_hg19_v1_chr15_-_79237389 AL110099 BC002479 BC018821 AK309491 AK314698 D28436 AK130158 NM_004390	-90316	-	TSC_hg19_v1_chr15_-_79237350 AF426247 AF426248 CR456881 CU677980 DQ890683 DQ893772 AK295583 X16832	-90380	-	L26584 CU691844 AB385192 TSC_hg19_v1_chr15_-_79382954	55184	-	AK290135 TSC_hg19_v1_chr15_-_79383114 BC040275 NM_001145648 NM_002891	55433	-	AK127037 NM_001146341	247430	+	NM_153815|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##S62035|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AL110099|CTSH|1512|cathepsin H##BC002479|CTSH|1512|cathepsin H##BC018821|CTSH|1512|cathepsin H##AK309491|CTSH|1512|cathepsin H##AK314698|CTSH|1512|cathepsin H##D28436|CTSH|1512|cathepsin H##AK130158|CTSH|1512|cathepsin H##NM_004390|CTSH|1512|cathepsin H##AF426247|CTSH|1512|cathepsin H##AF426248|CTSH|1512|cathepsin H##CR456881|CTSH|1512|cathepsin H##DQ890683|CTSH|1512|cathepsin H##DQ893772|CTSH|1512|cathepsin H##X16832|CTSH|1512|cathepsin H##L26584|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK290135|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##BC040275|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_001145648|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_002891|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK127037|ANKRD34C|390616|ankyrin repeat domain 34C##NM_001146341|ANKRD34C|390616|ankyrin repeat domain 34C	0.011374	
chr17	13017954	13018088	reg1030268.p1	4.906	+	TSC_hg19_v1_chr17_-_12921332 AK001392 NM_001165962 NM_018127 NM_173717	-96665	-	TSC_hg19_v1_chr17_-_12921325 AK298397 AK094687 BC001939 BC004158	-96702	-	TSC_hg19_v1_chr17_-_12921295 AK300011 AF304370 CR457261 CU674942	-96745	-	AY358838 TSC_hg19_v1_chr17_-_13505228 AF105376 NM_006042 AK292047	487216	-	TSC_hg19_v1_chr17_-_13972756 AK123100	954741	-	NM_001303 TSC_hg19_v1_chr17_+_13972839 AK312718	954758	+	AK001392|ELAC2|60528|elaC homolog 2 (E. coli)##NM_001165962|ELAC2|60528|elaC homolog 2 (E. coli)##NM_018127|ELAC2|60528|elaC homolog 2 (E. coli)##NM_173717|ELAC2|60528|elaC homolog 2 (E. coli)##AK298397|ELAC2|60528|elaC homolog 2 (E. coli)##AK094687|ELAC2|60528|elaC homolog 2 (E. coli)##BC001939|ELAC2|60528|elaC homolog 2 (E. coli)##BC004158|ELAC2|60528|elaC homolog 2 (E. coli)##AK300011|ELAC2|60528|elaC homolog 2 (E. coli)##AF304370|ELAC2|60528|elaC homolog 2 (E. coli)##CR457261|ELAC2|60528|elaC homolog 2 (E. coli)##AY358838|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AF105376|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_006042|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AK292047|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_001303|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK312718|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	0.878595	CTCF.p2:-12:0.879
chr19	7405812	7405992	reg1000572.p1	4.906	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	-111942	-	TSC_hg19_v1_chr19_-_7099547 AK127494	-306351	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-336187	+	TSC_hg19_v1_chr19_+_7460030 NM_015318	54105	+	TSC_hg19_v1_chr19_+_7460061 AB011093	54175	+	AK127045 NM_001130955	98671	+	BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr3	121714096	121714276	reg1015350.p1	4.906	+	NM_001145998 NM_021082 AK289820 AK296895 AK302002 AK304189 BC020743 BC044572 BC038445 S78203	-100954	+	AF217516 NM_018456 TSC_hg19_v1_chr3_+_121554083 BC014589 AY049020 BC014209 AF517829 AK301560 AB528527 CU676923 DQ892648 DQ895887	-160106	+	TSC_hg19_v1_chr3_-_121553908 AB062481 AY714228 NM_001023570 NM_001023571	-160259	-	AY672837 AY672839 BC044240 AY134857 TSC_hg19_v1_chr3_-_121741095 AK129974 NM_001199799 NM_001199800 NM_175924	26861	-	NM_001206924 NM_001206925 NM_175862 AK294663 AK301237 AK316203 BC040261 L25259 AK291497 AK313103	60068	+	NM_006889 NM_176892 U04343	82536	+	NM_001145998|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##NM_021082|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK289820|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK296895|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK302002|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK304189|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC020743|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC044572|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC038445|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##S78203|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AF217516|EAF2|55840|ELL associated factor 2##NM_018456|EAF2|55840|ELL associated factor 2##BC014589|EAF2|55840|ELL associated factor 2##AY049020|EAF2|55840|ELL associated factor 2##BC014209|EAF2|55840|ELL associated factor 2##AF517829|EAF2|55840|ELL associated factor 2##AK301560|EAF2|55840|ELL associated factor 2##DQ892648|EAF2|55840|ELL associated factor 2##DQ895887|EAF2|55840|ELL associated factor 2##AB062481|IQCB1|9657|IQ motif containing B1##AY714228|IQCB1|9657|IQ motif containing B1##NM_001023570|IQCB1|9657|IQ motif containing B1##NM_001023571|IQCB1|9657|IQ motif containing B1##AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1##BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199799|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199800|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001206924|CD86|942|CD86 molecule##NM_001206925|CD86|942|CD86 molecule##NM_175862|CD86|942|CD86 molecule##AK294663|CD86|942|CD86 molecule##AK301237|CD86|942|CD86 molecule##AK316203|CD86|942|CD86 molecule##BC040261|CD86|942|CD86 molecule##L25259|CD86|942|CD86 molecule##AK291497|CD86|942|CD86 molecule##AK313103|CD86|942|CD86 molecule##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule	0.0	
chr3	183863174	183863314	reg1026174.p1	4.906	+	TSC_hg19_v1_chr3_+_183853169 AK310207 AB208821 DQ891483 DQ894670	-10077	+	AK091646 AX747110 BC013590 TSC_hg19_v1_chr3_+_183853147 AL832179 AK307347	-10133	+	BC053646 NM_003907 BC050476	-10427	+	TSC_hg19_v1_chr3_+_183873217 AK304686	9987	+	TSC_hg19_v1_chr3_+_183873280 D86963 NM_004423	10033	+	TSC_hg19_v1_chr3_+_183873305 U49262	10061	+	AK310207|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##AB208821|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##DQ891483|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##DQ894670|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##AK091646|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##BC013590|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##AL832179|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##AK307347|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##BC053646|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##NM_003907|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##BC050476|EIF2B5|8893|eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa##AK304686|DVL3|1857|dishevelled, dsh homolog 3 (Drosophila)##D86963|DVL3|1857|dishevelled, dsh homolog 3 (Drosophila)##NM_004423|DVL3|1857|dishevelled, dsh homolog 3 (Drosophila)##U49262|DVL3|1857|dishevelled, dsh homolog 3 (Drosophila)	0.989867	CTCF.p2:-32:0.990
chr11	34175786	34175967	reg1024294.p1	4.905	+	TSC_hg19_v1_chr11_+_34127208 AK294044 AL136882 AK001636 BC014440 BC020205	-48626	+	NM_001144030 NM_024662 TSC_hg19_v1_chr11_+_34127175 AK022241 AK225341 BC035558 AB051496	-48719	+	TSC_hg19_v1_chr11_+_34073956 EU176359 EU176467 EU176701	-101839	+	TSC_hg19_v1_chr11_-_34379556 AK291744 NM_145804	203679	-	TSC_hg19_v1_chr11_+_34460487 AK291585 NM_001752 BC110398 AK315350 X04076 BC112217 BC112219	284598	+	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	284673	+	AK294044|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AL136882|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK001636|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC014440|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC020205|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_001144030|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_024662|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK022241|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK225341|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC035558|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AB051496|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##EU176359|CAPRIN1|4076|cell cycle associated protein 1##EU176467|CAPRIN1|4076|cell cycle associated protein 1##EU176701|CAPRIN1|4076|cell cycle associated protein 1##AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##AK291585|CAT|847|catalase##NM_001752|CAT|847|catalase##BC110398|CAT|847|catalase##AK315350|CAT|847|catalase##X04076|CAT|847|catalase##BC112217|CAT|847|catalase##BC112219|CAT|847|catalase##AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase	0.0	
chr20	4741589	4741770	reg1001586.p2	4.905	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	-39145	+	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	-74703	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	-512089	-	AY154472 NM_170774	54089	-	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	62515	-	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	240481	-	AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	0.0	
chr5	95296775	95296956	reg1012842.p1	4.905	+	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	-138345	-	AF162769 BT006689 CR450312 CR542165 DQ892497 DQ895709 CU679866 D21238 AF069668 BC106075 X76648 TSC_hg19_v1_chr5_-_95158431 AK311868 BC005304 BC010965	-138465	-	TSC_hg19_v1_chr5_+_95067531 CU691986 AB385392	-229329	+	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	633	-	TSC_hg19_v1_chr5_-_95297609 BC028412 NM_012081	820	-	AK308575 NM_001177876	451823	-	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##AF162769|GLRX|2745|glutaredoxin (thioltransferase)##BT006689|GLRX|2745|glutaredoxin (thioltransferase)##CR450312|GLRX|2745|glutaredoxin (thioltransferase)##CR542165|GLRX|2745|glutaredoxin (thioltransferase)##DQ892497|GLRX|2745|glutaredoxin (thioltransferase)##DQ895709|GLRX|2745|glutaredoxin (thioltransferase)##D21238|GLRX|2745|glutaredoxin (thioltransferase)##AF069668|GLRX|2745|glutaredoxin (thioltransferase)##BC106075|GLRX|2745|glutaredoxin (thioltransferase)##X76648|GLRX|2745|glutaredoxin (thioltransferase)##AK311868|GLRX|2745|glutaredoxin (thioltransferase)##BC005304|GLRX|2745|glutaredoxin (thioltransferase)##BC010965|GLRX|2745|glutaredoxin (thioltransferase)##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2##BC028412|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_012081|ELL2|22936|elongation factor, RNA polymerase II, 2##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1	0.0	
chr7	1915101	1915208	reg1028388.p1	4.905	+	NM_001128636	-166357	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-305333	+	AB067495 TSC_hg19_v1_chr7_+_1609735	-305421	+	TSC_hg19_v1_chr7_-_1980177 BC018870	65009	-	AK310481 TSC_hg19_v1_chr7_-_2272542	357381	-	TSC_hg19_v1_chr7_-_2272559 AF083811	357406	-	NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AB067495|KIAA1908|114796|uncharacterized LOC114796##BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AF083811|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.0	
chr7	87556008	87556187	reg1024149.p1	4.905	+	AK302010 TSC_hg19_v1_chr7_+_87505937 BC022811 CU690272	-50117	+	BC036045 TSC_hg19_v1_chr7_+_87505839 AK292569 AF160249 BC014909 AF160876 BC035632 AK303175 BC047693	-50293	+	TSC_hg19_v1_chr7_-_87505673 AF125531 NM_018843	-50418	-	TSC_hg19_v1_chr7_+_87563605 BC036029 BC092465 NM_004194 NM_016351 NM_021721 NM_021722 NM_021723 AK291010 BC062433 BC125118 BC125117 AF073291 AF155381 AF155382	7486	+	AB464235 L12387 TSC_hg19_v1_chr7_-_87849352 AK295225 BC011025 M32886	293255	-	TSC_hg19_v1_chr7_-_87849391 AK129770 AK310366 NM_003130	293308	-	AK302010|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC022811|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC036045|DBF4|10926|DBF4 homolog (S. cerevisiae)##AK292569|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF160249|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC014909|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF160876|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC035632|DBF4|10926|DBF4 homolog (S. cerevisiae)##AK303175|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC047693|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF125531|SLC25A40|55972|solute carrier family 25, member 40##NM_018843|SLC25A40|55972|solute carrier family 25, member 40##BC036029|ADAM22|53616|ADAM metallopeptidase domain 22##BC092465|ADAM22|53616|ADAM metallopeptidase domain 22##NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22##NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22##AK291010|ADAM22|53616|ADAM metallopeptidase domain 22##BC062433|ADAM22|53616|ADAM metallopeptidase domain 22##BC125118|ADAM22|53616|ADAM metallopeptidase domain 22##BC125117|ADAM22|53616|ADAM metallopeptidase domain 22##AF073291|ADAM22|53616|ADAM metallopeptidase domain 22##AF155381|ADAM22|53616|ADAM metallopeptidase domain 22##AF155382|ADAM22|53616|ADAM metallopeptidase domain 22##L12387|SRI|6717|sorcin##AK295225|SRI|6717|sorcin##BC011025|SRI|6717|sorcin##M32886|SRI|6717|sorcin##AK129770|SRI|6717|sorcin##AK310366|SRI|6717|sorcin##NM_003130|SRI|6717|sorcin	0.0	
chr10	62580168	62580344	reg1028393.p1	4.904	+	TSC_hg19_v1_chr10_+_62538253 BC107750 AK291939	-41985	+	NM_001170406 AK295741 NM_001170407 NM_001786 NM_033379 X05360 Y00272 TSC_hg19_v1_chr10_+_62538235	-42093	+	TSC_hg19_v1_chr10_-_62493282 NM_001204403	-86972	-	BC041791 AB018283 BC032848 TSC_hg19_v1_chr10_-_62704033 NM_001242359 NM_014836 AK307630	123696	-	AK075129 BC093035 TSC_hg19_v1_chr10_-_62761269	180984	-	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	632703	-	BC107750|CDK1|983|cyclin-dependent kinase 1##AK291939|CDK1|983|cyclin-dependent kinase 1##NM_001170406|CDK1|983|cyclin-dependent kinase 1##AK295741|CDK1|983|cyclin-dependent kinase 1##NM_001170407|CDK1|983|cyclin-dependent kinase 1##NM_001786|CDK1|983|cyclin-dependent kinase 1##NM_033379|CDK1|983|cyclin-dependent kinase 1##X05360|CDK1|983|cyclin-dependent kinase 1##Y00272|CDK1|983|cyclin-dependent kinase 1##NM_001204403|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BC041791|RHOBTB1|9886|Rho-related BTB domain containing 1##AB018283|RHOBTB1|9886|Rho-related BTB domain containing 1##BC032848|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_001242359|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_014836|RHOBTB1|9886|Rho-related BTB domain containing 1##AK307630|RHOBTB1|9886|Rho-related BTB domain containing 1##AK075129|RHOBTB1|9886|Rho-related BTB domain containing 1##BC093035|RHOBTB1|9886|Rho-related BTB domain containing 1##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26	0.971001	CTCF.p2:-18:0.971
chr1	158942778	158942883	reg1029156.p1	4.904	+	NM_152501 NM_198928 NM_198929 NM_198930 AY185344 AY185345 AY185346 AY185347 BC090944 AK308350 BC020822 BC073133 BC114470 BC139741	-41471	+	TSC_hg19_v1_chr1_+_158801140 BC020715 BC032319 AK290392 AK313210 M81750 NM_002432	-141694	+	NM_001005278	-195406	-	NM_001206567 NM_005531 TSC_hg19_v1_chr1_+_158979716 AF208043 M63838 AB208989 BC017059 AF086545 AK296228 AK307957	36960	+	AK292042 BC010940 AF024714 NM_004833	103770	-	AK289541 NM_021189 TSC_hg19_v1_chr1_+_159141404 AK308915 NM_001127173 AF363367 AY358332 AF062733 BC033819 AY046418 AF529206 DQ890848 DQ894002	198635	+	NM_152501|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198928|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198929|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198930|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185344|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185345|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185346|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185347|PYHIN1|149628|pyrin and HIN domain family, member 1##BC090944|PYHIN1|149628|pyrin and HIN domain family, member 1##AK308350|PYHIN1|149628|pyrin and HIN domain family, member 1##BC020822|PYHIN1|149628|pyrin and HIN domain family, member 1##BC073133|PYHIN1|149628|pyrin and HIN domain family, member 1##BC114470|PYHIN1|149628|pyrin and HIN domain family, member 1##BC139741|PYHIN1|149628|pyrin and HIN domain family, member 1##BC020715|MNDA|4332|myeloid cell nuclear differentiation antigen##BC032319|MNDA|4332|myeloid cell nuclear differentiation antigen##AK290392|MNDA|4332|myeloid cell nuclear differentiation antigen##AK313210|MNDA|4332|myeloid cell nuclear differentiation antigen##M81750|MNDA|4332|myeloid cell nuclear differentiation antigen##NM_002432|MNDA|4332|myeloid cell nuclear differentiation antigen##NM_001005278|OR6N2|81442|olfactory receptor, family 6, subfamily N, member 2##NM_001206567|IFI16|3428|interferon, gamma-inducible protein 16##NM_005531|IFI16|3428|interferon, gamma-inducible protein 16##AF208043|IFI16|3428|interferon, gamma-inducible protein 16##M63838|IFI16|3428|interferon, gamma-inducible protein 16##AB208989|IFI16|3428|interferon, gamma-inducible protein 16##BC017059|IFI16|3428|interferon, gamma-inducible protein 16##AF086545|IFI16|3428|interferon, gamma-inducible protein 16##AK296228|IFI16|3428|interferon, gamma-inducible protein 16##AK307957|IFI16|3428|interferon, gamma-inducible protein 16##AK292042|AIM2|9447|absent in melanoma 2##BC010940|AIM2|9447|absent in melanoma 2##AF024714|AIM2|9447|absent in melanoma 2##NM_004833|AIM2|9447|absent in melanoma 2##AK289541|CADM3|57863|cell adhesion molecule 3##NM_021189|CADM3|57863|cell adhesion molecule 3##AK308915|CADM3|57863|cell adhesion molecule 3##NM_001127173|CADM3|57863|cell adhesion molecule 3##AF363367|CADM3|57863|cell adhesion molecule 3##AY358332|CADM3|57863|cell adhesion molecule 3##AF062733|CADM3|57863|cell adhesion molecule 3##BC033819|CADM3|57863|cell adhesion molecule 3##AY046418|CADM3|57863|cell adhesion molecule 3##AF529206|CADM3|57863|cell adhesion molecule 3##DQ890848|CADM3|57863|cell adhesion molecule 3##DQ894002|CADM3|57863|cell adhesion molecule 3	0.0	
chr3	2198162	2198322	reg1012413.p2	4.904	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	-57681	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	-1063579	+	AK126307 TSC_hg19_v1_chr3_+_577916	-1620327	+	NM_001206955	82270	+	AK095729 TSC_hg19_v1_chr3_+_2553286	355038	+	NM_001206956 NM_175613 AK057278 AK314396 BC026119	735667	+	AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##NM_001206955|CNTN4|152330|contactin 4##AK095729|CNTN4|152330|contactin 4##NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4	0.0	
chrX	47818485	47818574	reg1025180.p1	4.904	+	TSC_hg19_v1_chrX_+_47696322 BC039609	-122186	+	TSC_hg19_v1_chrX_+_47696313 AK126949 NM_007137	-122232	+	TSC_hg19_v1_chrX_-_47518553 AF083241 AK312072 AF092737 NM_004182 NM_153477	-299965	-	TSC_hg19_v1_chrX_-_47863389 BC114216 AK299325 AK122874 NM_001007088 NM_006962 NM_001178099	44824	-	AY358844 NM_205856	45204	+	NM_001079900 AF217622	48643	+	BC039609|ZNF81|347344|zinc finger protein 81##AK126949|ZNF81|347344|zinc finger protein 81##NM_007137|ZNF81|347344|zinc finger protein 81##AF083241|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AK312072|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##AF092737|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##NM_004182|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##NM_153477|UXT|8409|ubiquitously-expressed, prefoldin-like chaperone##BC114216|ZNF182|7569|zinc finger protein 182##AK299325|ZNF182|7569|zinc finger protein 182##AK122874|ZNF182|7569|zinc finger protein 182##NM_001007088|ZNF182|7569|zinc finger protein 182##NM_006962|ZNF182|7569|zinc finger protein 182##NM_001178099|ZNF182|7569|zinc finger protein 182##AY358844|SPACA5|389852|sperm acrosome associated 5##NM_205856|SPACA5|389852|sperm acrosome associated 5##NM_001079900|SPACA5B|729201|sperm acrosome associated 5B##AF217622|SPACA5|389852|sperm acrosome associated 5	0.740883	CTCF.p2:2:0.741
chr1	101753846	101754026	reg1001585.p1	4.903	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-51366	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-51555	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-262503	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	708551	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	708854	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1742847	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.0	
chr1	156066914	156067094	reg1001296.p3	4.903	+	TSC_hg19_v1_chr1_+_156052358 AK056143	-14631	+	AY950677 NM_001093725 TSC_hg19_v1_chr1_-_156051805	-15206	-	AF274025 BC009831 NM_020387 BC033322 AF083124	-36031	+	TSC_hg19_v1_chr1_+_156084501 NM_005572 NM_170707 NM_170708 X03444 X03445 AK026584 AK122732 AY357727 BC014507 BC033088 BC000511	17489	+	TSC_hg19_v1_chr1_+_156084553 BC003162 AK130179	17547	+	TSC_hg19_v1_chr1_+_156084568 M13451	17566	+	AK056143|LMNA|4000|lamin A/C##AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)##NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)##AF274025|RAB25|57111|RAB25, member RAS oncogene family##BC009831|RAB25|57111|RAB25, member RAS oncogene family##NM_020387|RAB25|57111|RAB25, member RAS oncogene family##BC033322|RAB25|57111|RAB25, member RAS oncogene family##AF083124|RAB25|57111|RAB25, member RAS oncogene family##NM_005572|LMNA|4000|lamin A/C##NM_170707|LMNA|4000|lamin A/C##NM_170708|LMNA|4000|lamin A/C##X03444|LMNA|4000|lamin A/C##X03445|LMNA|4000|lamin A/C##AK026584|LMNA|4000|lamin A/C##AK122732|LMNA|4000|lamin A/C##AY357727|LMNA|4000|lamin A/C##BC014507|LMNA|4000|lamin A/C##BC033088|LMNA|4000|lamin A/C##BC000511|LMNA|4000|lamin A/C##BC003162|LMNA|4000|lamin A/C##AK130179|LMNA|4000|lamin A/C##M13451|LMNA|4000|lamin A/C	0.0	
chr12	9202244	9202376	reg1028086.p1	4.903	+	AK316337 BC012621 AK301367 AF081675 AF097358 NM_005810 AF034952 DQ892820 DQ896066	-60127	+	TSC_hg19_v1_chr12_-_9102262 NM_001207024 NM_002355	-100001	-	TSC_hg19_v1_chr12_-_9102242 AK291143 M16985 AK222792 BC024206 AK312689	-100092	-	TSC_hg19_v1_chr12_-_9268457 AB384991 AK307832 AK312482 AB209614	66146	-	TSC_hg19_v1_chr12_-_9268510 M11313 BC040071 AY591530	66183	-	BC026246 TSC_hg19_v1_chr12_-_9268516 BX647329 CR749334	66206	-	AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##NM_001207024|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##NM_002355|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK291143|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##M16985|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK222792|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##BC024206|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK312689|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK307832|A2M|2|alpha-2-macroglobulin##AK312482|A2M|2|alpha-2-macroglobulin##AB209614|A2M|2|alpha-2-macroglobulin##M11313|A2M|2|alpha-2-macroglobulin##BC040071|A2M|2|alpha-2-macroglobulin##AY591530|A2M|2|alpha-2-macroglobulin##BC026246|A2M|2|alpha-2-macroglobulin##BX647329|A2M|2|alpha-2-macroglobulin##CR749334|A2M|2|alpha-2-macroglobulin	0.976293	CTCF.p2:13:0.976
chr16	21561907	21562025	reg1029589.p2	4.903	+	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	-30214	-	BC036263 NM_130464	-125309	-	BX648477 NM_001014444 NM_001888	-247579	-	TSC_hg19_v1_chr16_+_21610912 NM_001077180 NM_016025 AJ278577 AJ278578 AK074529 BC000195 AK313077 AK075022 AK075237	48924	+	AF151839 TSC_hg19_v1_chr16_+_21611174	49188	+	TSC_hg19_v1_chr16_-_21663930 DQ892013 DQ895202 EU176227 EU176324 AK313860 AK223286 AK290910 AK293703 BC017844	101954	-	BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BX648477|CRYM|1428|crystallin, mu##NM_001014444|CRYM|1428|crystallin, mu##NM_001888|CRYM|1428|crystallin, mu##NM_001077180|METTL9|51108|methyltransferase like 9##NM_016025|METTL9|51108|methyltransferase like 9##AJ278577|METTL9|51108|methyltransferase like 9##AJ278578|METTL9|51108|methyltransferase like 9##AK074529|METTL9|51108|methyltransferase like 9##BC000195|METTL9|51108|methyltransferase like 9##AK313077|METTL9|51108|methyltransferase like 9##AK075022|METTL9|51108|methyltransferase like 9##AK075237|METTL9|51108|methyltransferase like 9##AF151839|METTL9|51108|methyltransferase like 9##DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6##DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6##EU176227|IGSF6|10261|immunoglobulin superfamily, member 6##EU176324|IGSF6|10261|immunoglobulin superfamily, member 6##AK313860|IGSF6|10261|immunoglobulin superfamily, member 6##AK223286|IGSF6|10261|immunoglobulin superfamily, member 6##AK290910|IGSF6|10261|immunoglobulin superfamily, member 6##AK293703|IGSF6|10261|immunoglobulin superfamily, member 6##BC017844|IGSF6|10261|immunoglobulin superfamily, member 6	0.72839	CTCF.p2:-12:0.728
chr8	123807403	123807513	reg1028474.p2	4.903	+	TSC_hg19_v1_chr8_+_123794108 AB020661	-13355	+	BC042145 TSC_hg19_v1_chr8_+_123794000	-13464	+	TSC_hg19_v1_chr8_+_123793897 NM_014943	-13547	+	TSC_hg19_v1_chr8_+_123963651 EU446694 AB083653	156241	+	BC002457 TSC_hg19_v1_chr8_-_124054522	247049	-	AY358818 TSC_hg19_v1_chr8_-_124054540 AK303826	247082	-	AB020661|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##EU446694|ZHX2|22882|zinc fingers and homeoboxes 2##AB083653|ZHX2|22882|zinc fingers and homeoboxes 2##BC002457|DERL1|79139|Der1-like domain family, member 1##AY358818|DERL1|79139|Der1-like domain family, member 1##AK303826|DERL1|79139|Der1-like domain family, member 1	0.259143	CTCF.p2:0:0.259
chr8	142138131	142138310	reg1026463.p2	4.903	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-126964	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-492596	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-616657	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	517	+	AK128212 NM_001080431	100452	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	125970	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.017133	
chr12	91247951	91248059	reg1028489.p1	4.902	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-1144460	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-1145318	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-1198154	-	BC026075 BC024183 BC027600 BC034491 NM_152638	100946	-	U59111 TSC_hg19_v1_chr12_-_91398750	150742	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	150774	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.017407	
chr14	89783768	89783946	reg1025848.p1	4.902	+	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-492864	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-524647	-	NM_207662 BC027607 AF474376	-723104	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	94919	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	99553	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	301738	-	AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3	0.0	
chr18	19431427	19431526	reg1028013.p2	4.902	+	CR749635 TSC_hg19_v1_chr18_+_19353654	-77829	+	AY149908 BC110581 BC110582 NM_020774	-109932	+	TSC_hg19_v1_chr18_+_19321288 AY147849	-110193	+	AK123079 TSC_hg19_v1_chr18_-_19749029	317510	-	X95701 BC027891 NM_005257 TSC_hg19_v1_chr18_+_19749549	318000	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	566349	-	CR749635|MIB1|57534|mindbomb homolog 1 (Drosophila)##AY149908|MIB1|57534|mindbomb homolog 1 (Drosophila)##BC110581|MIB1|57534|mindbomb homolog 1 (Drosophila)##BC110582|MIB1|57534|mindbomb homolog 1 (Drosophila)##NM_020774|MIB1|57534|mindbomb homolog 1 (Drosophila)##AY147849|MIB1|57534|mindbomb homolog 1 (Drosophila)##AK123079|LOC100128893|100128893|uncharacterized LOC100128893##X95701|GATA6|2627|GATA binding protein 6##BC027891|GATA6|2627|GATA binding protein 6##NM_005257|GATA6|2627|GATA binding protein 6##HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1	0.600089	CTCF.p2:12:0.600
chr19	7197135	7197284	reg1019783.p1	4.902	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-97658	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-127494	+	AK315405 NM_001044387 NM_001044388 NM_024341	-127747	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	96751	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	262798	+	TSC_hg19_v1_chr19_+_7460061 AB011093	262868	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr7	6144076	6144246	reg1020142.p1	4.902	+	TSC_hg19_v1_chr7_-_6098822 NM_001134335 NM_014413	-45314	-	TSC_hg19_v1_chr7_-_6098807 AF255050	-45356	-	TSC_hg19_v1_chr7_-_6098780 AM392648 AM393276 CU675439 AF100784 AF183414 AL136563 AL834494 AF181071 AB037790 AF147094 AK075192 BC006524 AK290327 AK295712	-45428	-	TSC_hg19_v1_chr7_+_6144564 NM_032172 AK298164	382	+	TSC_hg19_v1_chr7_+_6144605 AK022759 AY618868 BC060846 AK309375	437	+	AB528964 DQ891736 DQ894912 EU176610 AJ223957 TSC_hg19_v1_chr7_-_6312242 AJ005197 NM_004227 AK313728 BC028717	168070	-	NM_001134335|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##NM_014413|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AF255050|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AM392648|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AM393276|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AF100784|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AF183414|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AL136563|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AL834494|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AB037790|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AF147094|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AK075192|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##BC006524|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AK290327|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AK295712|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##NM_032172|USP42|84132|ubiquitin specific peptidase 42##AK298164|USP42|84132|ubiquitin specific peptidase 42##AK022759|USP42|84132|ubiquitin specific peptidase 42##AY618868|USP42|84132|ubiquitin specific peptidase 42##BC060846|USP42|84132|ubiquitin specific peptidase 42##AK309375|USP42|84132|ubiquitin specific peptidase 42##DQ891736|CYTH3|9265|cytohesin 3##DQ894912|CYTH3|9265|cytohesin 3##EU176610|CYTH3|9265|cytohesin 3##AJ223957|CYTH3|9265|cytohesin 3##AJ005197|CYTH3|9265|cytohesin 3##NM_004227|CYTH3|9265|cytohesin 3##AK313728|CYTH3|9265|cytohesin 3##BC028717|CYTH3|9265|cytohesin 3	0.0	
chr20	58625359	58625527	reg1027266.p2	4.901	+	BC062570 NM_021810 AK074477	-54021	+	NM_177980 AK055202	-91968	+	TSC_hg19_v1_chr20_+_58515434 AK304220 NM_001190827 NM_022106 BC020771 BC054002	-109955	+	TSC_hg19_v1_chr20_+_58630979 AK091179 AX746831 NM_173644	5552	+	TSC_hg19_v1_chr20_+_58713521 AK309218 AK092805 AX747739	88091	+	TSC_hg19_v1_chr20_+_59827453 BC101651 BC112150 NM_001794 AK315192 L34059	1202062	+	BC062570|CDH26|60437|cadherin 26##NM_021810|CDH26|60437|cadherin 26##AK074477|CDH26|60437|cadherin 26##NM_177980|CDH26|60437|cadherin 26##AK055202|CDH26|60437|cadherin 26##AK304220|C20orf177|63939|chromosome 20 open reading frame 177##NM_001190827|C20orf177|63939|chromosome 20 open reading frame 177##NM_022106|C20orf177|63939|chromosome 20 open reading frame 177##BC020771|C20orf177|63939|chromosome 20 open reading frame 177##BC054002|C20orf177|63939|chromosome 20 open reading frame 177##AK091179|C20orf197|284756|chromosome 20 open reading frame 197##NM_173644|C20orf197|284756|chromosome 20 open reading frame 197##AK092805|LOC284757|284757|uncharacterized LOC284757##BC101651|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC112150|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001794|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK315192|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##L34059|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)	0.928402	CTCF.p2:-5:0.928
chr10	43932141	43932231	reg1026919.p1	4.900	+	TSC_hg19_v1_chr10_-_43904631 BC015580 BC004254 AK296696 NM_004966 NM_001098204	-27540	-	TSC_hg19_v1_chr10_-_43904306 AK001364 NM_001098205	-27868	-	TSC_hg19_v1_chr10_-_43903224 BC016736 NM_001098206	-28927	-	AK302442 TSC_hg19_v1_chr10_+_43932667	434	+	NM_005674 X82125	131720	-	BC026030 X82128 AK292013 NM_001099282 NM_001099283 NM_001099284	137850	-	BC015580|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##BC004254|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##AK296696|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_004966|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_001098204|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##AK001364|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_001098205|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##BC016736|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_001098206|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##AK302442|ZNF487P|642819|zinc finger protein 487, pseudogene##NM_005674|ZNF239|8187|zinc finger protein 239##X82125|ZNF239|8187|zinc finger protein 239##BC026030|ZNF239|8187|zinc finger protein 239##X82128|ZNF239|8187|zinc finger protein 239##AK292013|ZNF239|8187|zinc finger protein 239##NM_001099282|ZNF239|8187|zinc finger protein 239##NM_001099283|ZNF239|8187|zinc finger protein 239##NM_001099284|ZNF239|8187|zinc finger protein 239	0.0	
chr16	19896128	19896206	reg1026828.p1	4.900	+	AK295204 AF202640 TSC_hg19_v1_chr16_-_19896168 BC034467 AF181862 NM_016235 AK294680 AK075119 AK315989 AK296754	-3	-	TSC_hg19_v1_chr16_-_19729532 BC117562 NM_001012991	-166680	-	TSC_hg19_v1_chr16_+_19727698 AF520569 AF520570 AK000122 NM_153208	-168430	+	AB196529 AY635179 BC137237 BC137238 BC144547 NM_001002911 AK291384	188920	-	U36221 AK312277 BX647831 BX648201 BX649067 BX648023 NM_001007240 NM_001007241 NM_001007242 NM_001502 CR749600	442686	-	AK127643 AK055722 AK091961 AK096043 AX747279 M15881 BC035975 AK127648 NM_001008389 NM_003361	467865	-	AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC117562|C16orf88|400506|chromosome 16 open reading frame 88##NM_001012991|C16orf88|400506|chromosome 16 open reading frame 88##AF520569|IQCK|124152|IQ motif containing K##AF520570|IQCK|124152|IQ motif containing K##AK000122|IQCK|124152|IQ motif containing K##NM_153208|IQCK|124152|IQ motif containing K##AB196529|GPR139|124274|G protein-coupled receptor 139##AY635179|GPR139|124274|G protein-coupled receptor 139##BC137237|GPR139|124274|G protein-coupled receptor 139##BC137238|GPR139|124274|G protein-coupled receptor 139##NM_001002911|GPR139|124274|G protein-coupled receptor 139##AK291384|GPR139|124274|G protein-coupled receptor 139##U36221|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK312277|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX647831|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648201|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX649067|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648023|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007240|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007241|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007242|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001502|GP2|2813|glycoprotein 2 (zymogen granule membrane)##CR749600|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK127643|UMOD|7369|uromodulin##AK055722|UMOD|7369|uromodulin##AK091961|UMOD|7369|uromodulin##AK096043|UMOD|7369|uromodulin##M15881|UMOD|7369|uromodulin##BC035975|UMOD|7369|uromodulin##AK127648|UMOD|7369|uromodulin##NM_001008389|UMOD|7369|uromodulin##NM_003361|UMOD|7369|uromodulin	0.02312	
chr19	10982041	10982180	reg1029115.p2	4.900	+	BC157863 NM_001136482	-23005	+	AB528501 DQ892640 DQ895878 BC002443 BC018831 TSC_hg19_v1_chr19_-_10946889 U41804 NM_006858	-35186	-	TSC_hg19_v1_chr19_+_10828827 BC039596 AK289831	-153251	+	TSC_hg19_v1_chr19_+_10982255 NM_199141	140	+	TSC_hg19_v1_chr19_+_10982381 AL833242	326	+	CU680474 AB463355 AM392632 TSC_hg19_v1_chr19_-_11039312 BC000056 BC013014 NM_024029	57129	-	BC157863|C19orf38|255809|chromosome 19 open reading frame 38##NM_001136482|C19orf38|255809|chromosome 19 open reading frame 38##DQ892640|TMED1|11018|transmembrane emp24 protein transport domain containing 1##DQ895878|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC002443|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC018831|TMED1|11018|transmembrane emp24 protein transport domain containing 1##U41804|TMED1|11018|transmembrane emp24 protein transport domain containing 1##NM_006858|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC039596|DNM2|1785|dynamin 2##AK289831|DNM2|1785|dynamin 2##NM_199141|CARM1|10498|coactivator-associated arginine methyltransferase 1##AL833242|CARM1|10498|coactivator-associated arginine methyltransferase 1##AM392632|YIPF2|78992|Yip1 domain family, member 2##BC000056|YIPF2|78992|Yip1 domain family, member 2##BC013014|YIPF2|78992|Yip1 domain family, member 2##NM_024029|YIPF2|78992|Yip1 domain family, member 2	1.753422	CTCF.p2:24:0.997	CTCF.p2:97:0.756
chr2	40987356	40987457	reg1028274.p2	4.900	+	Y12878 Y12885 AK291696 BX537482 NM_001112802	-247834	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	-308184	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-329975	-	AK124893 NM_001242815	1193536	-	TSC_hg19_v1_chr2_+_42275160 NM_138370	1287726	+	AB528999 TSC_hg19_v1_chr2_+_42275979	1288555	+	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)	0.112547	
chr11	102681837	102681978	reg1028714.p2	4.899	+	TSC_hg19_v1_chr11_-_102668892 NM_001145938 NM_002421	-12979	-	AB463107 BT006874 BT020147 DQ890729 DQ893904 AK223035 BC013875 M15996 TSC_hg19_v1_chr11_-_102668890 AK024818 AK098450 AK130687 AK223281 AK297723 X05231 M13509 X54925 AK301340	-13051	-	BT007442 DQ891931 DQ895118 X07820 BC002591 AK222601 AK313960 NM_002425	-30568	-	DQ399598 CU686970 J03209 X05232 BC074815 BC074869 BC105954 BC107490 BC107491 AK313310 AK223283 AK223291 TSC_hg19_v1_chr11_-_102714339 BC069676 BC069716 NM_002422	32389	-	AB590529 HQ258263 L23808 AK313959 BC112301 BC143773 NM_002426	63807	-	AY256443 AY256444 HQ258010 X75308 BC067522 BC067523 BC074807 BC074808 AK315341 X81334 AK222748 AK292211 NM_002427	144540	-	NM_001145938|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##NM_002421|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##BT006874|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##BT020147|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##DQ890729|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##DQ893904|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK223035|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##BC013875|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##M15996|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK024818|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK098450|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK130687|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK223281|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK297723|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##X05231|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##M13509|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##X54925|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK301340|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##BT007442|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ891931|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ895118|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##X07820|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##BC002591|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##AK222601|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##AK313960|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##NM_002425|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ399598|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##J03209|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##X05232|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074815|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074869|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC105954|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107490|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107491|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK313310|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223283|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223291|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069676|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069716|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##NM_002422|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##HQ258263|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##L23808|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##AK313959|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##BC112301|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##BC143773|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##NM_002426|MMP12|4321|matrix metallopeptidase 12 (macrophage elastase)##AY256443|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AY256444|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##HQ258010|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##X75308|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC067522|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC067523|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC074807|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##BC074808|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK315341|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##X81334|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK222748|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##AK292211|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)##NM_002427|MMP13|4322|matrix metallopeptidase 13 (collagenase 3)	0.978405	CTCF.p2:-25:0.978
chr2	191192174	191192240	reg1045400.p2	4.899	+	NM_014362 NM_198047	-7437	-	TSC_hg19_v1_chr2_-_191184553 AK222979 AK223023 AK308042 BC067822 AK313651 U66669 BC005190	-7668	-	NM_001042519 BC005083 NM_032321 AK313395	-146567	+	NM_001128928 NM_002194 TSC_hg19_v1_chr2_+_191208270	16029	+	TSC_hg19_v1_chr2_+_191208326 AK093560	16167	+	TSC_hg19_v1_chr2_+_191208645 BC106006	16449	+	NM_014362|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_198047|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK222979|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK223023|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK308042|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##BC067822|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK313651|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##U66669|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##BC005190|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_001042519|C2orf88|84281|chromosome 2 open reading frame 88##BC005083|C2orf88|84281|chromosome 2 open reading frame 88##NM_032321|C2orf88|84281|chromosome 2 open reading frame 88##AK313395|C2orf88|84281|chromosome 2 open reading frame 88##NM_001128928|INPP1|3628|inositol polyphosphate-1-phosphatase##NM_002194|INPP1|3628|inositol polyphosphate-1-phosphatase##AK093560|INPP1|3628|inositol polyphosphate-1-phosphatase##BC106006|INPP1|3628|inositol polyphosphate-1-phosphatase	0.0	
chr3	55933966	55934090	reg1028422.p1	4.899	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-412410	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-412696	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-418620	-	BC111550 BC112391 AB002376 NM_015576	568349	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	657174	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	657218	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.800995	CTCF.p2:3:0.801
chr4	9019225	9019332	reg1031021.p1	4.899	+	NM_001040071	-67802	+	AB593128 M99587 NM_018942	-145781	-	U83411 TSC_hg19_v1_chr4_+_8594521	-424755	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	197851	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	226325	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	240570	+	NM_001040071|LOC650293|650293|seven transmembrane helix receptor##M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.0	
chr5	38421123	38421303	reg1011118.p2	4.899	+	NM_182798 AK097549 BC031251	-17572	+	CU687828 TSC_hg19_v1_chr5_+_38258922	-162324	+	BX647551 TSC_hg19_v1_chr5_+_38258660 BC063822 AK291602	-162547	+	NM_182801 BC033177 AK092994 AX747843 BC033188	24411	+	TSC_hg19_v1_chr5_-_38556749 AK290059 NM_001127671	135515	-	AK308158 AK309882 NM_002310	174293	-	NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BX647551|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC063822|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK291602|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_182801|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033177|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK092994|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033188|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha##AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha##AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha	0.0	
chr13	68012737	68012859	reg1028769.p1	4.898	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-208294	-	AK289924 NM_022843	-6023144	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-6023545	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	2669743	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	4427461	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	4427965	-	BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)	0.72815	CTCF.p2:0:0.728
chr16	28985400	28985496	reg1026102.p1	4.898	+	BC068007 BC101741 BC112182 TSC_hg19_v1_chr16_+_28962327 AF458593 NM_032815 AK074761 AK304172	-23210	+	NM_001178098 NM_001770 BC006338 AK301363 AK313577 BC052294 M21097 X13312 AK307295 M28170 DQ893016 DQ896261 AK130657 AK301167 AK304456	-42146	+	AY129017 TSC_hg19_v1_chr16_-_28936536 AK295229 BC046118 AK026935 NM_024816 BC058900	-48940	-	TSC_hg19_v1_chr16_+_28986106 BC038961 NM_001142448 NM_001142449 NM_001142450 NM_001142451 NM_032038 AK095677 AK289787 BC065235 AF370423 BC047741 AB209402 AL390215 AF212371 BC008325 AM392778 AM393748 AB528362 CU678917 BC006156	806	+	BC011563 NM_001014989	10698	+	AK307342 NM_001014987 NM_001014988 NM_014387 TSC_hg19_v1_chr16_+_28996403 AJ223280	10950	+	BC068007|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC101741|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC112182|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AF458593|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##NM_032815|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK074761|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK304172|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##NM_001178098|CD19|930|CD19 molecule##NM_001770|CD19|930|CD19 molecule##BC006338|CD19|930|CD19 molecule##AK301363|CD19|930|CD19 molecule##AK313577|CD19|930|CD19 molecule##BC052294|CD19|930|CD19 molecule##M21097|CD19|930|CD19 molecule##X13312|CD19|930|CD19 molecule##AK307295|CD19|930|CD19 molecule##DQ893016|CD19|930|CD19 molecule##DQ896261|CD19|930|CD19 molecule##AK130657|CD19|930|CD19 molecule##AK301167|CD19|930|CD19 molecule##AK304456|CD19|930|CD19 molecule##AK295229|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC046118|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##AK026935|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##NM_024816|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC058900|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC038961|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142448|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142449|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142450|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142451|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_032038|SPNS1|83985|spinster homolog 1 (Drosophila)##AK095677|SPNS1|83985|spinster homolog 1 (Drosophila)##AK289787|SPNS1|83985|spinster homolog 1 (Drosophila)##BC065235|SPNS1|83985|spinster homolog 1 (Drosophila)##AF370423|SPNS1|83985|spinster homolog 1 (Drosophila)##BC047741|SPNS1|83985|spinster homolog 1 (Drosophila)##AL390215|SPNS1|83985|spinster homolog 1 (Drosophila)##AF212371|SPNS1|83985|spinster homolog 1 (Drosophila)##BC008325|SPNS1|83985|spinster homolog 1 (Drosophila)##AM392778|SPIN1|10927|spindlin 1##AM393748|SPIN1|10927|spindlin 1##BC006156|SPNS1|83985|spinster homolog 1 (Drosophila)##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells##AK307342|LAT|27040|linker for activation of T cells##NM_001014987|LAT|27040|linker for activation of T cells##NM_001014988|LAT|27040|linker for activation of T cells##NM_014387|LAT|27040|linker for activation of T cells##AJ223280|LAT|27040|linker for activation of T cells	0.776971	CTCF.p2:-17:0.777
chr2	89240843	89240929	reg1027970.p1	4.898	+	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	-55796	+	S49006 TSC_hg19_v1_chr2_-_89165772	-75174	-	BX648045 TSC_hg19_v1_chr2_+_89065391 AL137717 BC031698	-175485	+	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	51527	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	201703	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	272347	-	BX648045|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AL137717|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##BC031698|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##BC070336|IGKC|3514|immunoglobulin kappa constant	0.800255	CTCF.p2:-5:0.800
chr3	147101511	147101692	reg1031411.p1	4.898	+	AY436642 NM_001085420	-777599	-	BC157886 BC171917 TSC_hg19_v1_chr3_-_146323105	-778534	-	TSC_hg19_v1_chr3_-_146262505 AF098642 AB006746 NM_021105	-839077	-	BC041954 TSC_hg19_v1_chr3_+_147111244	9631	+	AK294831 NM_001168378	20469	-	AK293981 NM_001168379	21705	-	AY436642|PLSCR5|389158|phospholipid scramblase family, member 5##NM_001085420|PLSCR5|389158|phospholipid scramblase family, member 5##BC157886|PLSCR5|389158|phospholipid scramblase family, member 5##BC171917|PLSCR5|389158|phospholipid scramblase family, member 5##AF098642|PLSCR1|5359|phospholipid scramblase 1##AB006746|PLSCR1|5359|phospholipid scramblase 1##NM_021105|PLSCR1|5359|phospholipid scramblase 1##AK294831|ZIC4|84107|Zic family member 4##NM_001168378|ZIC4|84107|Zic family member 4##AK293981|ZIC4|84107|Zic family member 4##NM_001168379|ZIC4|84107|Zic family member 4	0.051051	
chr5	8908313	8908454	reg1028364.p1	4.898	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-1039073	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-1039124	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-1039251	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	637811	-	BC095521 NM_019599	722079	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	1341601	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.0	
chr6	32399936	32400061	reg1023165.p1	4.898	+	BC119668 BC127641 BC127642 NM_019602 AY684332 AY684333	-25096	-	AK302176 BC034774 NM_006781 AK310230 AK225742	-60335	-	U95299 BC140782 BC144540 BC144541 BC063815 AK290785 NM_004557	-208187	-	NM_019111 TSC_hg19_v1_chr6_+_32407663 AK301134 AK297032 AK301354 AK301190 AK304429 AK313123 BC071659 BC032350 AK310161 J00197 J00194 M60333 M60334 J00195 K01171 M35979 AB528984 CR457013 CU687128 DQ891595 DQ894789	7674	+	U17380 M30181 AB463852 M20429 NM_002125 BC009234 AK314834 TSC_hg19_v1_chr6_-_32498065 M57648 M32578 M20503	98019	-	AF017439 TSC_hg19_v1_chr6_-_32552033 U56640 AF436097 U83583 U83584 U95818 M21008 AM056024	152075	-	BC119668|BTNL2|56244|butyrophilin-like 2 (MHC class II associated)##BC127641|BTNL2|56244|butyrophilin-like 2 (MHC class II associated)##BC127642|BTNL2|56244|butyrophilin-like 2 (MHC class II associated)##NM_019602|BTNL2|56244|butyrophilin-like 2 (MHC class II associated)##AY684332|BTNL2|56244|butyrophilin-like 2 (MHC class II associated)##AY684333|BTNL2|56244|butyrophilin-like 2 (MHC class II associated)##AK302176|C6orf10|10665|chromosome 6 open reading frame 10##BC034774|C6orf10|10665|chromosome 6 open reading frame 10##NM_006781|C6orf10|10665|chromosome 6 open reading frame 10##AK310230|C6orf10|10665|chromosome 6 open reading frame 10##AK225742|C6orf10|10665|chromosome 6 open reading frame 10##U95299|NOTCH4|4855|notch 4##BC140782|NOTCH4|4855|notch 4##BC144540|NOTCH4|4855|notch 4##BC144541|NOTCH4|4855|notch 4##BC063815|NOTCH4|4855|notch 4##AK290785|NOTCH4|4855|notch 4##NM_004557|NOTCH4|4855|notch 4##NM_019111|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##AK301134|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##AK297032|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##AK301354|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##AK301190|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##AK313123|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##BC071659|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##BC032350|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##AK310161|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##J00194|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##M60333|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##M60334|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##K01171|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##M35979|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##CR457013|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##DQ891595|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##DQ894789|HLA-DRA|3122|major histocompatibility complex, class II, DR alpha##M30181|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M20429|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##NM_002125|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##BC009234|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AK314834|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M57648|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M32578|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M20503|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##AF017439|HLA-DRB4|3126|major histocompatibility complex, class II, DR beta 4##U56640|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##AF436097|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1##U95818|HLA-DRB5|3127|major histocompatibility complex, class II, DR beta 5##M21008|HLA-DRB1|3123|major histocompatibility complex, class II, DR beta 1	0.943967	CTCF.p2:-42:0.944
chr7	99331260	99331358	reg1028510.p1	4.898	+	DQ890743 DQ893913 DQ896802 EU176488 L26985 X90579 J04813 BC033862 BC025176 TSC_hg19_v1_chr7_-_99277620 AK296205 AK313813 AK223008 AK299002 AK309166 BC022298 BC026255 BX648856 BX537676 NM_000777 NM_001190484	-53738	-	TSC_hg19_v1_chr7_+_99214586 BX648158 AK057030 NM_145115 BX640720	-116719	+	NM_001195541 NM_001195542 NM_001195543	-135408	+	AF315325 AJ563378 AJ563379 CU688294 D00408 BC069780 BC067436 NM_000765	1457	-	AJ563375 AJ563376 AJ563377 AY606313 CU686796 DQ924960 AF182273 BC069352 BC069418 D00003 M13785 X12387 J04449 M14096 M18907 BC101631 TSC_hg19_v1_chr7_-_99381808 AK298451 AK312967 AK298462 NM_001202855 NM_017460	50450	-	AF337813 NM_022820 NM_057095 NM_057096 BC100981 BC100982 AF280108 AF280109 AF280110 AF280111 AF280112 AF280113 AF319634 AY390423 AY390424 AY390425 AY390426	94377	+	DQ890743|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##DQ893913|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##DQ896802|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##EU176488|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##L26985|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##X90579|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##J04813|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##BC033862|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##BC025176|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##AK296205|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##AK313813|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##AK223008|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##AK299002|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##AK309166|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##BC022298|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##BC026255|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##BX648856|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##BX537676|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##NM_000777|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##NM_001190484|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##BX648158|ZNF498|221785|zinc finger protein 498##AK057030|ZNF498|221785|zinc finger protein 498##NM_145115|ZNF498|221785|zinc finger protein 498##BX640720|ZNF498|221785|zinc finger protein 498##NM_001195541|LOC100289187|100289187|transmembrane protein 225-like##NM_001195542|LOC100289187|100289187|transmembrane protein 225-like##NM_001195543|LOC100289187|100289187|transmembrane protein 225-like##AF315325|CYP3A7|1551|cytochrome P450, family 3, subfamily A, polypeptide 7##AJ563378|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##AJ563379|CYP3A5|1577|cytochrome P450, family 3, subfamily A, polypeptide 5##D00408|CYP3A7|1551|cytochrome P450, family 3, subfamily A, polypeptide 7##BC069780|CYP3A7|1551|cytochrome P450, family 3, subfamily A, polypeptide 7##BC067436|CYP3A7|1551|cytochrome P450, family 3, subfamily A, polypeptide 7##NM_000765|CYP3A7|1551|cytochrome P450, family 3, subfamily A, polypeptide 7##AJ563375|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AJ563376|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AJ563377|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AY606313|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##DQ924960|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AF182273|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##BC069352|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##BC069418|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##D00003|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##M13785|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##X12387|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##J04449|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##M14096|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##M18907|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##BC101631|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AK298451|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AK312967|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AK298462|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##NM_001202855|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##NM_017460|CYP3A4|1576|cytochrome P450, family 3, subfamily A, polypeptide 4##AF337813|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##NM_022820|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##NM_057095|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##NM_057096|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##BC100981|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##BC100982|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280108|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280109|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280110|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280111|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280112|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF280113|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AF319634|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AY390423|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AY390424|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AY390425|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43##AY390426|CYP3A43|64816|cytochrome P450, family 3, subfamily A, polypeptide 43	0.070145	
chr10	1685457	1685580	reg1026508.p1	4.897	+	TSC_hg19_v1_chr10_+_1102822 AK292591	-582692	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-582749	+	BC057827 TSC_hg19_v1_chr10_-_1102645	-582866	-	AF034837 NM_018702	94151	-	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	1424229	+	AK092597 AX747622 NM_001242339	1425300	+	AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC057827|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet	0.07276	
chr10	17243631	17243773	reg1026786.p1	4.897	+	AF034611 NM_001081 TSC_hg19_v1_chr10_-_17171878	-71869	-	TSC_hg19_v1_chr10_-_16859451 BC015644 BC005993 BC107898 BX647733 NM_012425 NM_152724	-384267	-	TSC_hg19_v1_chr10_-_16859397 AK225681 AK312520	-384308	-	TSC_hg19_v1_chr10_-_17243660 CR450316 AF045888 AK291417 AF012128 BC047733 AK303428 BX537961 AJ223333 AK299027	31	-	NM_004412	367	-	NM_003380	26555	+	AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)##NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)##BC015644|RSU1|6251|Ras suppressor protein 1##BC005993|RSU1|6251|Ras suppressor protein 1##BC107898|RSU1|6251|Ras suppressor protein 1##BX647733|RSU1|6251|Ras suppressor protein 1##NM_012425|RSU1|6251|Ras suppressor protein 1##NM_152724|RSU1|6251|Ras suppressor protein 1##AK225681|RSU1|6251|Ras suppressor protein 1##AK312520|RSU1|6251|Ras suppressor protein 1##CR450316|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF045888|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK291417|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF012128|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##BC047733|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK303428|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##BX537961|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AJ223333|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK299027|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##NM_004412|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##NM_003380|VIM|7431|vimentin	0.0	
chr11	31255109	31255216	reg1027130.p1	4.897	+	BX647348 NM_020869	-240930	-	TSC_hg19_v1_chr11_-_30607762 AB209163 AK314833 NM_001145399	-647317	-	TSC_hg19_v1_chr11_-_30605748 AK309809	-649414	-	AY247970 AK126066 NM_181807	136176	-	TSC_hg19_v1_chr11_+_31391404 NM_181706 AK123087 AL833128 AK289665 BC036571 BC044931 BC063804	136240	+	AK311611 BC023595 TSC_hg19_v1_chr11_-_31531154 AK310496 AK057788 NM_144981	275982	-	BX647348|DCDC5|100506627|doublecortin domain containing 5##NM_020869|DCDC5|100506627|doublecortin domain containing 5##AB209163|MPPED2|744|metallophosphoesterase domain containing 2##AK314833|MPPED2|744|metallophosphoesterase domain containing 2##NM_001145399|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2##AY247970|DCDC1|341019|doublecortin domain containing 1##NM_181807|DCDC1|341019|doublecortin domain containing 1##NM_181706|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK123087|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AL833128|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK289665|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC036571|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC044931|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC063804|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK311611|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC023595|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK310496|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK057788|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_144981|IMMP1L|196294|IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)	0.069025	
chr1	21581986	21582098	reg1000238.p2	4.897	+	TSC_hg19_v1_chr1_-_21503387 NM_001198801 NM_001198802	-78672	-	TSC_hg19_v1_chr1_-_21503344 BC072413 AB209119	-78718	-	BC030578 NM_001198803	-80803	-	D43698 TSC_hg19_v1_chr1_-_21606025 BX648351 NM_001113347	24041	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	34666	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	34892	-	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##D43698|ECE1|1889|endothelin converting enzyme 1##BX648351|ECE1|1889|endothelin converting enzyme 1##NM_001113347|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1	0.0	
chr12	44409415	44409570	reg1005511.p2	4.897	+	TSC_hg19_v1_chr12_+_44229883 BC042192 BC060798 AK057287 BC030284 AL136855 NM_032256	-179586	+	AK127868 BT019691 CR541736 CR541761 AB209302 AB384914 TSC_hg19_v1_chr12_-_44200120 AK291223 BC022491 BC022344 U02680 BC068548 EU832120 EU832214 AK297206 BC043148 NM_001242397 NM_002822	-209380	-	TSC_hg19_v1_chr12_+_44152777 BC013316 AY340962 AY340963 AY340964 AY340965 AY340966 AY340967 AF155118 AK000528	-256713	+	D89629 AK315960 AK299277 NM_001145109	859899	-	BC020544 TSC_hg19_v1_chr12_-_45269991	860485	-	TSC_hg19_v1_chr12_-_45270099 AK056082 AK297521 AK309825 D83018	860613	-	BC042192|TMEM117|84216|transmembrane protein 117##BC060798|TMEM117|84216|transmembrane protein 117##AK057287|TMEM117|84216|transmembrane protein 117##BC030284|TMEM117|84216|transmembrane protein 117##AL136855|TMEM117|84216|transmembrane protein 117##NM_032256|TMEM117|84216|transmembrane protein 117##AK127868|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BT019691|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541736|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541761|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AB209302|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK291223|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022491|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022344|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##U02680|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC068548|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832120|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832214|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK297206|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC043148|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_001242397|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_002822|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC013316|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340962|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340963|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340964|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340965|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340966|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340967|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AF155118|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK000528|IRAK4|51135|interleukin-1 receptor-associated kinase 4##D89629|NELL2|4753|NEL-like 2 (chicken)##AK315960|NELL2|4753|NEL-like 2 (chicken)##AK299277|NELL2|4753|NEL-like 2 (chicken)##NM_001145109|NELL2|4753|NEL-like 2 (chicken)##BC020544|NELL2|4753|NEL-like 2 (chicken)##AK056082|NELL2|4753|NEL-like 2 (chicken)##AK297521|NELL2|4753|NEL-like 2 (chicken)##AK309825|NELL2|4753|NEL-like 2 (chicken)##D83018|NELL2|4753|NEL-like 2 (chicken)	0.014428	
chr13	22250955	22251072	reg1027360.p1	4.897	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-5865	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-72653	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-72704	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	1504102	+	TSC_hg19_v1_chr13_-_23949652 AK125458	1698637	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	1756827	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.716737	CTCF.p2:-1:0.717
chr21	42733951	42734068	reg1026816.p1	4.897	+	TSC_hg19_v1_chr21_+_42733956 M30818 NM_002463 AK308060 AK126107	-71	+	AK125528 NM_058186 NM_206964 TSC_hg19_v1_chr21_+_42688738 BC057829 AF375989 AJ409094 AY040086 AY358459 HQ257913 AF494379	-45276	+	AK302095 BC036314 TSC_hg19_v1_chr21_+_42676236	-57803	+	TSC_hg19_v1_chr21_+_42742025 AK298780	8010	+	AK096355 NM_001144925	58471	+	NM_002462 TSC_hg19_v1_chr21_+_42798165 AK225885 AK315465 NM_001178046 M33882 BC052255	64085	+	M30818|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##NM_002463|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK308060|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK126107|LOC100131190|100131190|uncharacterized LOC100131190##AK125528|FAM3B|54097|family with sequence similarity 3, member B##NM_058186|FAM3B|54097|family with sequence similarity 3, member B##NM_206964|FAM3B|54097|family with sequence similarity 3, member B##BC057829|FAM3B|54097|family with sequence similarity 3, member B##AF375989|FAM3B|54097|family with sequence similarity 3, member B##AJ409094|FAM3B|54097|family with sequence similarity 3, member B##AY040086|FAM3B|54097|family with sequence similarity 3, member B##AY358459|FAM3B|54097|family with sequence similarity 3, member B##HQ257913|FAM3B|54097|family with sequence similarity 3, member B##AF494379|FAM3B|54097|family with sequence similarity 3, member B##BC036314|FAM3B|54097|family with sequence similarity 3, member B##AK298780|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK096355|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001144925|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_002462|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK225885|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK315465|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001178046|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##M33882|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##BC052255|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)	0.0	
chr21	45357861	45357933	reg1001021.p1	4.897	+	AK300562 NM_001037553	-12619	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	-72774	+	TSC_hg19_v1_chr21_+_45285029 AY358704	-72837	+	TSC_hg19_v1_chr21_+_45432211 BC071569 NM_003274 U61500 BC046241 BC052247 BC094823 U19252 BC101728 AB385171 CU692332	74443	+	TSC_hg19_v1_chr21_+_45527202 AK314184	169305	+	TSC_hg19_v1_chr21_+_45527251 NM_005049	169331	+	AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC071569|TRAPPC10|7109|trafficking protein particle complex 10##NM_003274|TRAPPC10|7109|trafficking protein particle complex 10##U61500|TRAPPC10|7109|trafficking protein particle complex 10##BC046241|TRAPPC10|7109|trafficking protein particle complex 10##BC052247|TRAPPC10|7109|trafficking protein particle complex 10##BC094823|TRAPPC10|7109|trafficking protein particle complex 10##U19252|TRAPPC10|7109|trafficking protein particle complex 10##BC101728|TRAPPC10|7109|trafficking protein particle complex 10##AK314184|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##NM_005049|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)	0.0	
chr5	123985958	123986127	reg1030443.p2	4.897	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1138160	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1226898	-	NM_001136239 AK297992 AF272898 AF272899	-1561198	+	BC131507 AB033107 BC151226 NM_020747	94746	-	NM_001146319 AK316288 AK300154	1709772	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1772801	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.0	
chr8	63015479	63015585	reg1029263.p1	4.897	+	TSC_hg19_v1_chr8_-_62627167 NM_001164754 NM_001164755 NM_001164756 NM_004318 NM_032466	-388343	-	TSC_hg19_v1_chr8_-_62627152 BC015518 BC025236 AK298577	-388394	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	-388514	-	TSC_hg19_v1_chr8_+_63161185 AK299689	145674	+	TSC_hg19_v1_chr8_+_63161499 AK096949 NM_173688 AX721226 AB463913	146032	+	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	935866	-	NM_001164754|ASPH|444|aspartate beta-hydroxylase##NM_001164755|ASPH|444|aspartate beta-hydroxylase##NM_001164756|ASPH|444|aspartate beta-hydroxylase##NM_004318|ASPH|444|aspartate beta-hydroxylase##NM_032466|ASPH|444|aspartate beta-hydroxylase##BC015518|ASPH|444|aspartate beta-hydroxylase##BC025236|ASPH|444|aspartate beta-hydroxylase##AK298577|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase##AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)	0.136248	
chr9	73007266	73007368	reg1027801.p2	4.897	+	TSC_hg19_v1_chr9_+_72873993 AB385355 AJ310550 DQ893364 DQ896768	-133328	+	BC038225 TSC_hg19_v1_chr9_+_72873908 BC017666 AB011166 AK055825	-133379	+	TSC_hg19_v1_chr9_+_72873893 AK304133 NM_015110	-133457	+	AB451404 CU686806 AB464604 EU446889 TSC_hg19_v1_chr9_-_73028875 BC074879 BC074880 AK313631 BC069431	21358	-	D31716 S72504 NM_001206	22238	-	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	476643	-	AJ310550|SMC5|23137|structural maintenance of chromosomes 5##DQ893364|SMC5|23137|structural maintenance of chromosomes 5##DQ896768|SMC5|23137|structural maintenance of chromosomes 5##BC038225|SMC5|23137|structural maintenance of chromosomes 5##BC017666|SMC5|23137|structural maintenance of chromosomes 5##AB011166|SMC5|23137|structural maintenance of chromosomes 5##AK055825|SMC5|23137|structural maintenance of chromosomes 5##AK304133|SMC5|23137|structural maintenance of chromosomes 5##NM_015110|SMC5|23137|structural maintenance of chromosomes 5##AB451404|KLF9|687|Kruppel-like factor 9##EU446889|KLF9|687|Kruppel-like factor 9##BC074879|KLF9|687|Kruppel-like factor 9##BC074880|KLF9|687|Kruppel-like factor 9##AK313631|KLF9|687|Kruppel-like factor 9##BC069431|KLF9|687|Kruppel-like factor 9##D31716|KLF9|687|Kruppel-like factor 9##S72504|KLF9|687|Kruppel-like factor 9##NM_001206|KLF9|687|Kruppel-like factor 9##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	0.888167	CTCF.p2:-4:0.888
chr19	15870917	15871003	reg1028069.p2	4.896	+	AB529277 BC106707 BC113844 NM_013938	-18759	+	BC112178 BC113647 NM_013939 HQ258140 BC069085 BC069457	-32117	+	NM_023944 AK304138 TSC_hg19_v1_chr19_+_15783896 AK304389 AK075435 AL832171 BC035350 AY358977 AB035130 AB035131	-87088	+	BC136869 AB529278 NM_001004466	33849	+	HQ258605 BC130360 BC132969 NM_013940	47931	-	BC067437 BC067438 BC067439 BC067440 D26480 AK313705 U02388 AK300961 TSC_hg19_v1_chr19_-_16008885 AK290790 AK296200 NM_001082	137917	-	BC106707|OR10H3|26532|olfactory receptor, family 10, subfamily H, member 3##BC113844|OR10H3|26532|olfactory receptor, family 10, subfamily H, member 3##NM_013938|OR10H3|26532|olfactory receptor, family 10, subfamily H, member 3##BC112178|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2##BC113647|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2##NM_013939|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2##HQ258140|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2##BC069085|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2##BC069457|OR10H2|26538|olfactory receptor, family 10, subfamily H, member 2##NM_023944|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK304138|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK304389|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AK075435|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AL832171|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##BC035350|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AY358977|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AB035130|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##AB035131|CYP4F12|66002|cytochrome P450, family 4, subfamily F, polypeptide 12##BC136869|OR10H5|284433|olfactory receptor, family 10, subfamily H, member 5##NM_001004466|OR10H5|284433|olfactory receptor, family 10, subfamily H, member 5##HQ258605|OR10H1|26539|olfactory receptor, family 10, subfamily H, member 1##BC130360|OR10H1|26539|olfactory receptor, family 10, subfamily H, member 1##BC132969|OR10H1|26539|olfactory receptor, family 10, subfamily H, member 1##NM_013940|OR10H1|26539|olfactory receptor, family 10, subfamily H, member 1##BC067437|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##BC067438|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##BC067439|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##BC067440|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##D26480|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##AK313705|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##U02388|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##AK300961|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##AK290790|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##AK296200|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##NM_001082|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2	0.788436	CTCF.p2:18:0.788
chr2	16689615	16689749	reg1030152.p2	4.896	+	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-607515	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-607687	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	-607909	-	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	157462	-	DQ860102 NM_001099218	1010023	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	1032205	+	BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1	0.106784	
chr6	88466699	88466880	reg1024623.p2	4.896	+	AK001204 NM_018064 TSC_hg19_v1_chr6_-_88411988	-54801	-	TSC_hg19_v1_chr6_-_88411949 AK222701	-54841	-	TSC_hg19_v1_chr6_-_88411885 BC000764 BC003042	-54880	-	BC029488 NM_030960 AF203447	290741	+	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	388247	-	NM_001160226 NM_001160258 NM_001160259 NM_016083	408977	-	AK001204|AKIRIN2|55122|akirin 2##NM_018064|AKIRIN2|55122|akirin 2##AK222701|AKIRIN2|55122|akirin 2##BC000764|AKIRIN2|55122|akirin 2##BC003042|AKIRIN2|55122|akirin 2##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)	0.0	
chr8	25367463	25367589	reg1028747.p1	4.896	+	TSC_hg19_v1_chr8_+_25316748 AK299278 AL833627 BC015691 BC104450 BC104451	-50692	+	AK292505 TSC_hg19_v1_chr8_+_25316724	-50804	+	NM_152562	-51014	+	BC137106 BC137107 NM_022659 TSC_hg19_v1_chr8_-_25902675 AK001144	535140	-	TSC_hg19_v1_chr8_+_26149035 NM_002717	781495	+	AK314823 TSC_hg19_v1_chr8_+_26149043 BC041071	781523	+	AK299278|CDCA2|157313|cell division cycle associated 2##AL833627|CDCA2|157313|cell division cycle associated 2##BC015691|CDCA2|157313|cell division cycle associated 2##BC104450|CDCA2|157313|cell division cycle associated 2##BC104451|CDCA2|157313|cell division cycle associated 2##AK292505|CDCA2|157313|cell division cycle associated 2##NM_152562|CDCA2|157313|cell division cycle associated 2##BC137106|EBF2|64641|early B-cell factor 2##BC137107|EBF2|64641|early B-cell factor 2##NM_022659|EBF2|64641|early B-cell factor 2##AK001144|EBF2|64641|early B-cell factor 2##NM_002717|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AK314823|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##BC041071|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha	0.992437	CTCF.p2:1:0.992
chr1	156066735	156066860	reg1001296.p2	4.895	+	TSC_hg19_v1_chr1_+_156052358 AK056143	-14424	+	AY950677 NM_001093725 TSC_hg19_v1_chr1_-_156051805	-14999	-	AF274025 BC009831 NM_020387 BC033322 AF083124	-35824	+	TSC_hg19_v1_chr1_+_156084501 NM_005572 NM_170707 NM_170708 X03444 X03445 AK026584 AK122732 AY357727 BC014507 BC033088 BC000511	17696	+	TSC_hg19_v1_chr1_+_156084553 BC003162 AK130179	17754	+	TSC_hg19_v1_chr1_+_156084568 M13451	17773	+	AK056143|LMNA|4000|lamin A/C##AY950677|MEX3A|92312|mex-3 homolog A (C. elegans)##NM_001093725|MEX3A|92312|mex-3 homolog A (C. elegans)##AF274025|RAB25|57111|RAB25, member RAS oncogene family##BC009831|RAB25|57111|RAB25, member RAS oncogene family##NM_020387|RAB25|57111|RAB25, member RAS oncogene family##BC033322|RAB25|57111|RAB25, member RAS oncogene family##AF083124|RAB25|57111|RAB25, member RAS oncogene family##NM_005572|LMNA|4000|lamin A/C##NM_170707|LMNA|4000|lamin A/C##NM_170708|LMNA|4000|lamin A/C##X03444|LMNA|4000|lamin A/C##X03445|LMNA|4000|lamin A/C##AK026584|LMNA|4000|lamin A/C##AK122732|LMNA|4000|lamin A/C##AY357727|LMNA|4000|lamin A/C##BC014507|LMNA|4000|lamin A/C##BC033088|LMNA|4000|lamin A/C##BC000511|LMNA|4000|lamin A/C##BC003162|LMNA|4000|lamin A/C##AK130179|LMNA|4000|lamin A/C##M13451|LMNA|4000|lamin A/C	0.0	
chr11	67227476	67227609	reg1023278.p2	4.895	+	AY039217 NM_145200	-4725	+	AY569571 BC119779 BC122869 NM_206997	-7343	-	NM_001018070	-16251	-	AK310743 TSC_hg19_v1_chr11_-_67236717 AK296988 AY007143 BC013883 BC051854 BC125134 AK303342 NM_001078650 NM_001078651 NM_025124 AK025402	9159	-	NM_003977 TSC_hg19_v1_chr11_+_67250510 U78521	22970	+	TSC_hg19_v1_chr11_+_67250595 BC104797 BC104827 U31913 AB529203 EU446613	23070	+	AY039217|CABP4|57010|calcium binding protein 4##NM_145200|CABP4|57010|calcium binding protein 4##AY569571|GPR152|390212|G protein-coupled receptor 152##BC119779|GPR152|390212|G protein-coupled receptor 152##BC122869|GPR152|390212|G protein-coupled receptor 152##NM_206997|GPR152|390212|G protein-coupled receptor 152##NM_001018070|CORO1B|57175|coronin, actin binding protein, 1B##AK310743|TMEM134|80194|transmembrane protein 134##AK296988|TMEM134|80194|transmembrane protein 134##AY007143|TMEM134|80194|transmembrane protein 134##BC013883|TMEM134|80194|transmembrane protein 134##BC051854|TMEM134|80194|transmembrane protein 134##BC125134|TMEM134|80194|transmembrane protein 134##AK303342|TMEM134|80194|transmembrane protein 134##NM_001078650|TMEM134|80194|transmembrane protein 134##NM_001078651|TMEM134|80194|transmembrane protein 134##NM_025124|TMEM134|80194|transmembrane protein 134##AK025402|TMEM134|80194|transmembrane protein 134##NM_003977|AIP|9049|aryl hydrocarbon receptor interacting protein##U78521|AIP|9049|aryl hydrocarbon receptor interacting protein##BC104797|AIP|9049|aryl hydrocarbon receptor interacting protein##BC104827|AIP|9049|aryl hydrocarbon receptor interacting protein##U31913|AIP|9049|aryl hydrocarbon receptor interacting protein##EU446613|AIP|9049|aryl hydrocarbon receptor interacting protein	0.0	
chr12	15139547	15139664	reg1031804.p1	4.895	+	NM_006205 DQ980604 D45399	-13639	+	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	-25057	-	CU688844 BC030218 AY358536 NM_152321 AK056677	-48144	-	AK311016 BC007997 AK295343 AK313881 NM_001190726 NM_032918	234745	-	NM_002848 NM_030667 TSC_hg19_v1_chr12_+_15475264 AB209729	335655	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	335946	+	NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##BC030218|ERP27|121506|endoplasmic reticulum protein 27##AY358536|ERP27|121506|endoplasmic reticulum protein 27##NM_152321|ERP27|121506|endoplasmic reticulum protein 27##AK056677|ERP27|121506|endoplasmic reticulum protein 27##AK311016|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##BC007997|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK295343|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK313881|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_001190726|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_032918|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AB209729|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	0.0	
chr12	49628333	49628493	reg1016733.p1	4.895	+	TSC_hg19_v1_chr12_-_49582864 BC006468 BC050637 AF141347 AK057842 AK297775 BC057823 NM_006009 AK298838	-45581	-	TSC_hg19_v1_chr12_-_49582309 AK289483	-46029	-	TSC_hg19_v1_chr12_-_49525284 NM_006082	-103126	-	TSC_hg19_v1_chr12_+_49658864 D28390 AK223024 BC005946 NM_032704	30450	+	TSC_hg19_v1_chr12_+_49658867 BC011790 BC004949 BC033064 BC051297 BC019298 BC021088	30471	+	NM_006262 TSC_hg19_v1_chr12_+_49688929 BC032703 AB528454 CU689492 DQ893358 DQ896677	60532	+	BC006468|TUBA1A|7846|tubulin, alpha 1a##BC050637|TUBA1A|7846|tubulin, alpha 1a##AF141347|TUBA1A|7846|tubulin, alpha 1a##AK057842|TUBA1A|7846|tubulin, alpha 1a##AK297775|TUBA1A|7846|tubulin, alpha 1a##BC057823|TUBA1A|7846|tubulin, alpha 1a##NM_006009|TUBA1A|7846|tubulin, alpha 1a##AK298838|TUBA1A|7846|tubulin, alpha 1a##AK289483|TUBA1A|7846|tubulin, alpha 1a##NM_006082|TUBA1B|10376|tubulin, alpha 1b##D28390|TUBA1C|84790|tubulin, alpha 1c##AK223024|TUBA1C|84790|tubulin, alpha 1c##BC005946|TUBA1C|84790|tubulin, alpha 1c##NM_032704|TUBA1C|84790|tubulin, alpha 1c##BC011790|TUBA1C|84790|tubulin, alpha 1c##BC004949|TUBA1C|84790|tubulin, alpha 1c##BC033064|TUBA1C|84790|tubulin, alpha 1c##BC051297|TUBA1C|84790|tubulin, alpha 1c##BC019298|TUBA1C|84790|tubulin, alpha 1c##BC021088|TUBA1C|84790|tubulin, alpha 1c##NM_006262|PRPH|5630|peripherin##BC032703|PRPH|5630|peripherin##DQ893358|PRPH|5630|peripherin##DQ896677|PRPH|5630|peripherin	0.977284	CTCF.p2:-23:0.977
chr14	79426160	79426292	reg1029572.p2	4.895	+	AB018286 BC152457 NM_004796	-556134	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-1159776	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-1198717	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	319478	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	1251678	-	AK292210 NM_000793	1271170	-	AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	0.991788	CTCF.p2:0:0.992
chr17	76183166	76183314	reg1030470.p1	4.895	+	AB451268 AB451395 BT006941 AB591021 BC007872 BC007986 BC006484 AK314950 K02581 TSC_hg19_v1_chr17_-_76183133 NM_003258	-61	-	TSC_hg19_v1_chr17_+_76164661 AJ002308 AY358916 NM_004710 BC000407 BC105992 BC029755 DQ891832 DQ895019	-18580	+	AY358510 NM_001163075	-40807	+	BC132824 NM_001010982 NM_001145526 TSC_hg19_v1_chr17_+_76183442 BC020920 BC142973 BX647783 BX648442 EU832465 EU832546 HQ258157	183	+	NM_001012270 NM_001012271 NM_001168 TSC_hg19_v1_chr17_+_76210320 AK301793	27059	+	TSC_hg19_v1_chr17_+_76210353 AK223428 BC000784 BC034148 AY927772 BC002388 BC008718 HM625836 AB028869 AF077350 AK311917 BC065497 AB590059 AM393128 AB154416 AY830084 CR541740 DQ227257 DQ310375 DQ310376 DQ310377 DQ310378 DQ310379 DQ508249 DQ508245 DQ508246 DQ508247 DQ508248	27157	+	AB451268|TK1|7083|thymidine kinase 1, soluble##AB451395|TK1|7083|thymidine kinase 1, soluble##BT006941|TK1|7083|thymidine kinase 1, soluble##BC007872|TK1|7083|thymidine kinase 1, soluble##BC007986|TK1|7083|thymidine kinase 1, soluble##BC006484|TK1|7083|thymidine kinase 1, soluble##AK314950|TK1|7083|thymidine kinase 1, soluble##K02581|TK1|7083|thymidine kinase 1, soluble##NM_003258|TK1|7083|thymidine kinase 1, soluble##AJ002308|SYNGR2|9144|synaptogyrin 2##AY358916|SYNGR2|9144|synaptogyrin 2##NM_004710|SYNGR2|9144|synaptogyrin 2##BC000407|SYNGR2|9144|synaptogyrin 2##BC105992|SYNGR2|9144|synaptogyrin 2##BC029755|SYNGR2|9144|synaptogyrin 2##DQ891832|SYNGR2|9144|synaptogyrin 2##DQ895019|SYNGR2|9144|synaptogyrin 2##AY358510|C17orf99|100141515|chromosome 17 open reading frame 99##NM_001163075|C17orf99|100141515|chromosome 17 open reading frame 99##BC132824|AFMID|125061|arylformamidase##NM_001010982|AFMID|125061|arylformamidase##NM_001145526|AFMID|125061|arylformamidase##BC020920|AFMID|125061|arylformamidase##BC142973|AFMID|125061|arylformamidase##BX648442|AFMID|125061|arylformamidase##EU832465|AFMID|125061|arylformamidase##EU832546|AFMID|125061|arylformamidase##HQ258157|AFMID|125061|arylformamidase##NM_001012270|BIRC5|332|baculoviral IAP repeat containing 5##NM_001012271|BIRC5|332|baculoviral IAP repeat containing 5##NM_001168|BIRC5|332|baculoviral IAP repeat containing 5##AK301793|BIRC5|332|baculoviral IAP repeat containing 5##AK223428|BIRC5|332|baculoviral IAP repeat containing 5##BC000784|BIRC5|332|baculoviral IAP repeat containing 5##BC034148|BIRC5|332|baculoviral IAP repeat containing 5##AY927772|BIRC5|332|baculoviral IAP repeat containing 5##BC008718|BIRC5|332|baculoviral IAP repeat containing 5##HM625836|BIRC5|332|baculoviral IAP repeat containing 5##AB028869|BIRC5|332|baculoviral IAP repeat containing 5##AF077350|BIRC5|332|baculoviral IAP repeat containing 5##AK311917|BIRC5|332|baculoviral IAP repeat containing 5##BC065497|BIRC5|332|baculoviral IAP repeat containing 5##AM393128|BIRC5|332|baculoviral IAP repeat containing 5##AB154416|BIRC5|332|baculoviral IAP repeat containing 5##AY830084|BIRC5|332|baculoviral IAP repeat containing 5##CR541740|BIRC5|332|baculoviral IAP repeat containing 5##DQ227257|BIRC5|332|baculoviral IAP repeat containing 5##DQ310375|BIRC5|332|baculoviral IAP repeat containing 5##DQ310376|BIRC5|332|baculoviral IAP repeat containing 5##DQ310377|BIRC5|332|baculoviral IAP repeat containing 5##DQ310378|BIRC5|332|baculoviral IAP repeat containing 5##DQ310379|BIRC5|332|baculoviral IAP repeat containing 5##DQ508249|BIRC5|332|baculoviral IAP repeat containing 5##DQ508245|BIRC5|332|baculoviral IAP repeat containing 5##DQ508246|BIRC5|332|baculoviral IAP repeat containing 5##DQ508247|BIRC5|332|baculoviral IAP repeat containing 5##DQ508248|BIRC5|332|baculoviral IAP repeat containing 5	0.733731	CTCF.p2:19:0.734
chr18	38676630	38676736	reg1029077.p2	4.895	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-1296415	-	TSC_hg19_v1_chr18_-_36915657 D28405	-1761027	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	-3530684	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	858516	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	858550	+	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	2018886	-	AK090603|LOC647946|647946|uncharacterized LOC647946##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2	0.0	
chr4	170214719	170214820	reg1028738.p1	4.895	+	TSC_hg19_v1_chr4_-_170192202 NM_020870	-22549	-	AK021429 TSC_hg19_v1_chr4_-_170192108	-22662	-	TSC_hg19_v1_chr4_-_170192099 BC053671	-22722	-	BC015147 BC114491 AB067488 CR933642 AL050385 TSC_hg19_v1_chr4_-_170533735 BC068201 CR936672	318867	-	TSC_hg19_v1_chr4_-_170533762 NM_001199397 NM_001199398 NM_001199399 NM_001199400 NM_012224	319000	-	TSC_hg19_v1_chr4_+_170541683 NM_001243372 NM_001829 NM_173872	326902	+	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1##AK021429|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1##BC015147|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC114491|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AB067488|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR933642|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AL050385|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC068201|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR936672|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199397|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199398|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199399|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199400|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_012224|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001243372|CLCN3|1182|chloride channel 3##NM_001829|CLCN3|1182|chloride channel 3##NM_173872|CLCN3|1182|chloride channel 3	0.0	
chr1	224888954	224889067	reg1010076.p2	4.894	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-84831	+	AB209887 NM_001115113 NM_025160	-267010	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-267250	-	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	228355	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	726719	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	726791	-	AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor	0.0	
chr4	22412379	22412532	reg1026389.p1	4.894	+	NM_147182 TSC_hg19_v1_chr4_-_21950396	-462071	-	BX648990 DQ148490 NM_001035003	-713138	-	DQ148491 NM_001035004	-866177	-	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	105099	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	282137	+	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	1479198	-	NM_147182|KCNIP4|80333|Kv channel interacting protein 4##BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##DQ148491|KCNIP4|80333|Kv channel interacting protein 4##NM_001035004|KCNIP4|80333|Kv channel interacting protein 4##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	0.990274	CTCF.p2:2:0.990
chr5	6480837	6481017	reg1022535.p2	4.894	+	TSC_hg19_v1_chr5_+_6449114 AK057805	-31738	+	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	-32074	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	-102277	-	TSC_hg19_v1_chr5_-_6633158 AK291144 BC137083 AK298980	152227	-	TSC_hg19_v1_chr5_-_6633411 AK055456 AB255451 NM_001193455 NM_017755	152482	-	NM_001047 TSC_hg19_v1_chr5_+_6633508	152583	+	AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##AK291144|NSUN2|54888|NOP2/Sun domain family, member 2##BC137083|NSUN2|54888|NOP2/Sun domain family, member 2##AK298980|NSUN2|54888|NOP2/Sun domain family, member 2##AK055456|NSUN2|54888|NOP2/Sun domain family, member 2##AB255451|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001193455|NSUN2|54888|NOP2/Sun domain family, member 2##NM_017755|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001047|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)	0.0	
chr7	111403397	111403510	reg1022638.p1	4.894	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	-200969	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-672330	+	NM_001024607	-2878817	-	TSC_hg19_v1_chr7_-_111428948 AK294820	25558	-	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	442812	-	TSC_hg19_v1_chr7_-_111846458 AK095906 AK309605 NM_014705	443009	-	AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AK294820|DOCK4|9732|dedicator of cytokinesis 4##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4##AK095906|DOCK4|9732|dedicator of cytokinesis 4##AK309605|DOCK4|9732|dedicator of cytokinesis 4##NM_014705|DOCK4|9732|dedicator of cytokinesis 4	0.0	
chr10	103600975	103601154	reg1000289.p5	4.893	+	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	-1452	-	TSC_hg19_v1_chr10_-_103578213 NM_001142434 NM_012215	-22846	-	TSC_hg19_v1_chr10_-_103578192 BC032591	-22878	-	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	2543	-	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	214848	-	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	224078	+	DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##NM_001142434|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##NM_012215|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC032591|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6	0.0	
chr1	29220372	29220475	reg1027816.p2	4.893	+	TSC_hg19_v1_chr1_+_29213624 M14993 M61733 J03796	-6766	+	TSC_hg19_v1_chr1_+_29213611 AB209649 NM_001166005 NM_001166007 NM_004437 NM_203342 NM_203343	-6832	+	NM_000911 U07882	-81770	+	TSC_hg19_v1_chr1_+_29241080 NM_001166006 BC039079 AK310655	20658	+	TSC_hg19_v1_chr1_-_29309157 D28453	88702	-	BC110336 NM_001171868	228589	-	M14993|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M61733|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##J03796|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##AB209649|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166005|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166007|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_004437|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203342|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203343|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_000911|OPRD1|4985|opioid receptor, delta 1##U07882|OPRD1|4985|opioid receptor, delta 1##NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##BC110336|TMEM200B|399474|transmembrane protein 200B##NM_001171868|TMEM200B|399474|transmembrane protein 200B	0.0	
chr12	121952162	121952342	reg1028817.p2	4.892	+	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	-47178	-	AF306709 TSC_hg19_v1_chr12_+_121837931 NM_025126 NM_194271 AK025439 AK225285 AK304366 BC007826 BC039029 BC046174 BC029038	-114288	+	AK025614 NM_001137559	-160241	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	66007	-	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	66662	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	112391	+	BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##AF306709|RNF34|80196|ring finger protein 34##NM_025126|RNF34|80196|ring finger protein 34##NM_194271|RNF34|80196|ring finger protein 34##AK025439|RNF34|80196|ring finger protein 34##AK225285|RNF34|80196|ring finger protein 34##BC007826|RNF34|80196|ring finger protein 34##BC039029|RNF34|80196|ring finger protein 34##BC046174|RNF34|80196|ring finger protein 34##AK025614|ANAPC5|51433|anaphase promoting complex subunit 5##NM_001137559|ANAPC5|51433|anaphase promoting complex subunit 5##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1	0.113493	
chr16	10660619	10660736	reg1030749.p1	4.892	+	NM_024997 BC137079 BC144468	-137937	+	AK093414 AX748112 TSC_hg19_v1_chr16_+_10479917 AK296565 AK299040 BC033891 BC041882	-180760	+	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	-384000	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	13813	-	HQ258441 BC130336 BC130338 AK057433 NM_144674	128088	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	177027	+	NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1	0.995756	CTCF.p2:10:0.996
chr19	1266712	1266892	reg1003246.p2	4.892	+	TSC_hg19_v1_chr19_+_1249886 BC060848 BC094778	-16918	+	TSC_hg19_v1_chr19_+_1248581 NM_177401	-18228	+	TSC_hg19_v1_chr19_+_1241811 BC050458 BC018079 CR542218	-24969	+	TSC_hg19_v1_chr19_+_1269330 NM_001280 AK095781 AK304185 AK304470 AK311601 AK128423 AF021336 AK094781 D78134 BC000901 BC000403	2503	+	CU674448 AB528491 EU176219 EU176522 AB451225 AB451348 BT007210 TSC_hg19_v1_chr19_+_1270968	4147	+	TSC_hg19_v1_chr19_+_1275540 NM_017914 BC000890 BC012080	8765	+	BC060848|MIDN|90007|midnolin##BC094778|MIDN|90007|midnolin##NM_177401|MIDN|90007|midnolin##BC050458|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC018079|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##CR542218|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001280|CIRBP|1153|cold inducible RNA binding protein##AK095781|CIRBP|1153|cold inducible RNA binding protein##AK304185|CIRBP|1153|cold inducible RNA binding protein##AK304470|CIRBP|1153|cold inducible RNA binding protein##AK311601|CIRBP|1153|cold inducible RNA binding protein##AK128423|CIRBP|1153|cold inducible RNA binding protein##AF021336|CIRBP|1153|cold inducible RNA binding protein##AK094781|CIRBP|1153|cold inducible RNA binding protein##D78134|CIRBP|1153|cold inducible RNA binding protein##BC000901|CIRBP|1153|cold inducible RNA binding protein##BC000403|CIRBP|1153|cold inducible RNA binding protein##EU176219|CIRBP|1153|cold inducible RNA binding protein##EU176522|CIRBP|1153|cold inducible RNA binding protein##AB451225|CIRBP|1153|cold inducible RNA binding protein##AB451348|CIRBP|1153|cold inducible RNA binding protein##BT007210|CIRBP|1153|cold inducible RNA binding protein##NM_017914|C19orf24|55009|chromosome 19 open reading frame 24##BC000890|C19orf24|55009|chromosome 19 open reading frame 24##BC012080|C19orf24|55009|chromosome 19 open reading frame 24	0.0	
chr19	2087934	2088040	reg1029228.p3	4.892	+	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	-2744	-	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-36754	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-41746	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	8278	-	TSC_hg19_v1_chr19_-_2096297 AL832474	8307	-	TSC_hg19_v1_chr19_+_2096913 AY358444 NM_001031735 NM_001039846 DQ196309 DQ196310 AK301957 AY753639 BC014609 BC040964 BC010443	8873	+	AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A##AY358444|IZUMO4|113177|IZUMO family member 4##NM_001031735|IZUMO4|113177|IZUMO family member 4##NM_001039846|IZUMO4|113177|IZUMO family member 4##DQ196309|IZUMO4|113177|IZUMO family member 4##DQ196310|IZUMO4|113177|IZUMO family member 4##AK301957|IZUMO4|113177|IZUMO family member 4##AY753639|IZUMO4|113177|IZUMO family member 4##BC014609|IZUMO4|113177|IZUMO family member 4##BC040964|IZUMO4|113177|IZUMO family member 4##BC010443|IZUMO4|113177|IZUMO family member 4	0.236006	CTCF.p2:22:0.236
chr19	35909205	35909365	reg1021848.p2	4.892	+	AK290710 NM_005304 BC035657	-59791	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	-66835	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	-89194	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	31332	+	AM392574 AM392667 AM392672 AM392738 AM392847 AM392851 AM393397 AM393477 AY359007 HQ258707 BC130501 NM_001244847 NM_207392	72103	-	AY622964 AY789707 AF086315 AL832080 NM_001035516	83520	-	AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule##AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2##AM392574|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392667|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392672|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392738|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392847|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392851|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393397|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393477|KRTDAP|388533|keratinocyte differentiation-associated protein##AY359007|KRTDAP|388533|keratinocyte differentiation-associated protein##HQ258707|KRTDAP|388533|keratinocyte differentiation-associated protein##BC130501|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_001244847|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_207392|KRTDAP|388533|keratinocyte differentiation-associated protein##AY622964|DMKN|93099|dermokine##AY789707|DMKN|93099|dermokine##AF086315|DMKN|93099|dermokine##AL832080|DMKN|93099|dermokine##NM_001035516|DMKN|93099|dermokine	0.0	
chr2	36560913	36561041	reg1030966.p1	4.892	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	-2736632	-	AB020653 NM_015376	-2822036	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-2859281	+	TSC_hg19_v1_chr2_+_36582920 AY358371	21985	+	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	22425	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	264305	-	BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)	0.016394	
chr7	128520230	128520338	reg1030306.p1	4.892	+	NM_001195150	-13821	+	TSC_hg19_v1_chr7_+_128502927 CR456896	-17342	+	NM_001198909 NM_004231 BC107854 TSC_hg19_v1_chr7_+_128502909 BC104230 BC104231 D49400 AK312214	-17394	+	TSC_hg19_v1_chr7_-_128543406 AK095464	23117	-	TSC_hg19_v1_chr7_-_128550763 AK122706 NM_001135914 NM_199349	30482	-	AK293654 AY693665 AY693668 NM_001098629 NM_001098630 NM_001242452 DQ995492 U51127 AK297083 AY504947 AY693666 AY693667 EU258896	57752	+	NM_001195150|LOC100130705|100130705|uncharacterized LOC100130705##CR456896|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##NM_001198909|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##NM_004231|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC107854|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC104230|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC104231|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##D49400|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##AK312214|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##AK095464|KCP|375616|kielin/chordin-like protein##AK122706|KCP|375616|kielin/chordin-like protein##NM_001135914|KCP|375616|kielin/chordin-like protein##NM_199349|KCP|375616|kielin/chordin-like protein##AK293654|IRF5|3663|interferon regulatory factor 5##AY693665|IRF5|3663|interferon regulatory factor 5##AY693668|IRF5|3663|interferon regulatory factor 5##NM_001098629|IRF5|3663|interferon regulatory factor 5##NM_001098630|IRF5|3663|interferon regulatory factor 5##NM_001242452|IRF5|3663|interferon regulatory factor 5##DQ995492|IRF5|3663|interferon regulatory factor 5##U51127|IRF5|3663|interferon regulatory factor 5##AK297083|IRF5|3663|interferon regulatory factor 5##AY504947|IRF5|3663|interferon regulatory factor 5##AY693666|IRF5|3663|interferon regulatory factor 5##AY693667|IRF5|3663|interferon regulatory factor 5##EU258896|IRF5|3663|interferon regulatory factor 5	0.012317	
chr8	26231791	26231894	reg1023234.p2	4.892	+	AK303981 NM_001177591	-81111	+	TSC_hg19_v1_chr8_+_26149092 M64929 AY189686	-82648	+	AK314823 TSC_hg19_v1_chr8_+_26149043 BC041071	-82793	+	NM_004331 TSC_hg19_v1_chr8_+_26240583 AF452712 AK300286 AL132665 BC009603 AF067396 AF079221 AF060922 AK307195 AK300727 AF536326 AB004788 AK290213 BC001559 AB527613 BT019500 BT019501 CR456701 EU831983 EU832076	8742	+	BC047515 TSC_hg19_v1_chr8_-_26371389 BC036489 AK055325 NM_007257	139592	-	TSC_hg19_v1_chr8_+_26371546 AK092377 NM_001197293 AB370195	139786	+	AK303981|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##NM_001177591|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##M64929|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AY189686|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AK314823|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##BC041071|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC047515|PNMA2|10687|paraneoplastic antigen MA2##BC036489|PNMA2|10687|paraneoplastic antigen MA2##AK055325|PNMA2|10687|paraneoplastic antigen MA2##NM_007257|PNMA2|10687|paraneoplastic antigen MA2##AK092377|DPYSL2|1808|dihydropyrimidinase-like 2##NM_001197293|DPYSL2|1808|dihydropyrimidinase-like 2##AB370195|DPYSL2|1808|dihydropyrimidinase-like 2	0.969676	CTCF.p2:-26:0.970
chrX	154493760	154493940	reg1029065.p2	4.892	+	AL834460 TSC_hg19_v1_chrX_-_154493774 AY052478 NM_171998 BC009714	-46	-	NM_003372 TSC_hg19_v1_chrX_+_154444736 BC009570 AK313420 BC046094 Y17394 BC040002 AB464347 BT019604 CU692296	-49121	+	TSC_hg19_v1_chrX_+_154299784 AK310286 X64643 AK299194 AK313544 BC002999 BC006540 AB462964 AM392829 AY438030 CU678330 AK298886	-194060	+	AB463493 AM393055 AY191592 DQ892014 DQ895204 BC022305 BC005367 AK292785 Y12696 NM_001289	70010	-	BC130510 BC130512 AF254576 NM_001017990 NM_080720 BC134365 HQ258044 BC101409 BC101415 BC101417 BC101418 CR542230 NM_001017991	116547	+	NM_012151 BC071963 AB462986 AM393473 AM393736 BC039693 DQ896667 NM_001007523 NM_001007524	117905	+	AL834460|RAB39B|116442|RAB39B, member RAS oncogene family##AY052478|RAB39B|116442|RAB39B, member RAS oncogene family##NM_171998|RAB39B|116442|RAB39B, member RAS oncogene family##BC009714|RAB39B|116442|RAB39B, member RAS oncogene family##NM_003372|VBP1|7411|von Hippel-Lindau binding protein 1##BC009570|VBP1|7411|von Hippel-Lindau binding protein 1##AK313420|VBP1|7411|von Hippel-Lindau binding protein 1##BC046094|VBP1|7411|von Hippel-Lindau binding protein 1##Y17394|VBP1|7411|von Hippel-Lindau binding protein 1##BC040002|VBP1|7411|von Hippel-Lindau binding protein 1##BT019604|VBP1|7411|von Hippel-Lindau binding protein 1##AK310286|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##X64643|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK299194|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK313544|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC002999|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC006540|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AM392829|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AY438030|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK298886|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AM393055|CLIC2|1193|chloride intracellular channel 2##AY191592|CLIC2|1193|chloride intracellular channel 2##DQ892014|CLIC2|1193|chloride intracellular channel 2##DQ895204|CLIC2|1193|chloride intracellular channel 2##BC022305|CLIC2|1193|chloride intracellular channel 2##BC005367|CLIC2|1193|chloride intracellular channel 2##AK292785|CLIC2|1193|chloride intracellular channel 2##Y12696|CLIC2|1193|chloride intracellular channel 2##NM_001289|CLIC2|1193|chloride intracellular channel 2##BC130510|H2AFB3|83740|H2A histone family, member B3##BC130512|H2AFB3|83740|H2A histone family, member B3##AF254576|H2AFB3|83740|H2A histone family, member B3##NM_001017990|H2AFB1|474382|H2A histone family, member B1##NM_080720|H2AFB3|83740|H2A histone family, member B3##BC134365|H2AFB2|474381|H2A histone family, member B2##HQ258044|H2AFB3|83740|H2A histone family, member B3##BC101409|H2AFB2|474381|H2A histone family, member B2##BC101415|H2AFB3|83740|H2A histone family, member B3##BC101417|H2AFB3|83740|H2A histone family, member B3##BC101418|H2AFB3|83740|H2A histone family, member B3##CR542230|H2AFB1|474382|H2A histone family, member B1##NM_001017991|H2AFB2|474381|H2A histone family, member B2##NM_012151|F8A1|8263|coagulation factor VIII-associated 1##BC071963|F8A1|8263|coagulation factor VIII-associated 1##AM393473|F8A1|8263|coagulation factor VIII-associated 1##AM393736|F8A1|8263|coagulation factor VIII-associated 1##BC039693|F8A1|8263|coagulation factor VIII-associated 1##DQ896667|F8A1|8263|coagulation factor VIII-associated 1##NM_001007523|F8A2|474383|coagulation factor VIII-associated 2##NM_001007524|F8A3|474384|coagulation factor VIII-associated 3	0.0	
chr11	64618867	64618993	reg1025447.p2	4.891	+	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	-6841	-	AJ297488 AJ297489 NM_130803 NM_130804	-40165	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	-40736	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	27052	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	27224	-	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	28231	-	AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I##AY007161|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1	0.0	
chr19	58144431	58144585	reg1024726.p2	4.891	+	BC112294 BC113410 NM_003435	-18681	+	TSC_hg19_v1_chr19_+_58125633 U09412 BC021280	-18869	+	TSC_hg19_v1_chr19_+_58125609 AK291763 BC053511 BC042636 BC011646	-18888	+	TSC_hg19_v1_chr19_+_58144535 NM_006385 NM_198855 AK294869 BC018138 AK296942 AK297047 AK304666 BC110856 BC034351 AK026941	57	+	U38904 TSC_hg19_v1_chr19_+_58152388	7851	+	AK092424 AX747538 NM_152677	35794	+	BC112294|ZNF134|7693|zinc finger protein 134##BC113410|ZNF134|7693|zinc finger protein 134##NM_003435|ZNF134|7693|zinc finger protein 134##U09412|ZNF134|7693|zinc finger protein 134##BC021280|ZNF134|7693|zinc finger protein 134##AK291763|ZNF134|7693|zinc finger protein 134##BC042636|ZNF134|7693|zinc finger protein 134##BC011646|ZNF134|7693|zinc finger protein 134##NM_006385|ZNF211|10520|zinc finger protein 211##NM_198855|ZNF211|10520|zinc finger protein 211##AK294869|ZNF211|10520|zinc finger protein 211##BC018138|ZNF211|10520|zinc finger protein 211##AK296942|ZNF211|10520|zinc finger protein 211##AK297047|ZNF211|10520|zinc finger protein 211##AK304666|ZNF211|10520|zinc finger protein 211##BC110856|ZNF211|10520|zinc finger protein 211##BC034351|ZNF211|10520|zinc finger protein 211##AK026941|ZNF211|10520|zinc finger protein 211##U38904|ZNF211|10520|zinc finger protein 211##AK092424|ZSCAN4|201516|zinc finger and SCAN domain containing 4##NM_152677|ZSCAN4|201516|zinc finger and SCAN domain containing 4	0.0	
chr22	35796173	35796257	reg1026272.p2	4.891	+	TSC_hg19_v1_chr22_+_35796157 BC000142 AK308343 CR456517 X74795 BC003656	-44	+	TSC_hg19_v1_chr22_+_35796134 NM_006739 AK223323 AK301121 D83986 AK130620 AK291136 AK298624 AK122853 AK312533	-90	+	AF051791 TSC_hg19_v1_chr22_+_35779219	-17053	+	TSC_hg19_v1_chr22_+_35796295 AB463121 CU013117 CU013405 CU674060 CU678562	147	+	TSC_hg19_v1_chr22_+_35936902 AX721069	140687	+	BC013419 NM_014310 CR456477	141178	+	BC000142|MCM5|4174|minichromosome maintenance complex component 5##AK308343|MCM5|4174|minichromosome maintenance complex component 5##CR456517|MCM5|4174|minichromosome maintenance complex component 5##X74795|MCM5|4174|minichromosome maintenance complex component 5##BC003656|MCM5|4174|minichromosome maintenance complex component 5##NM_006739|MCM5|4174|minichromosome maintenance complex component 5##AK223323|MCM5|4174|minichromosome maintenance complex component 5##AK301121|MCM5|4174|minichromosome maintenance complex component 5##D83986|MCM5|4174|minichromosome maintenance complex component 5##AK130620|MCM5|4174|minichromosome maintenance complex component 5##AK291136|MCM5|4174|minichromosome maintenance complex component 5##AK298624|MCM5|4174|minichromosome maintenance complex component 5##AK122853|MCM5|4174|minichromosome maintenance complex component 5##AK312533|MCM5|4174|minichromosome maintenance complex component 5##AF051791|HMOX1|3162|heme oxygenase (decycling) 1##CU013117|MCM5|4174|minichromosome maintenance complex component 5##CU013405|MCM5|4174|minichromosome maintenance complex component 5##BC013419|RASD2|23551|RASD family, member 2##NM_014310|RASD2|23551|RASD family, member 2##CR456477|RASD2|23551|RASD family, member 2	0.0	
chr5	162433076	162433229	reg1027443.p1	4.891	+	NM_000816 NM_198903 NM_198904 BC052926 BC036030 X15376 BC059389 BC069348 BC074795 AK315200 AK299640	-938307	+	NM_001127648 AB590312 DQ890915	-1155393	+	NM_001127647	-1155761	+	TSC_hg19_v1_chr5_+_162864606 AK316234 NM_004060 NM_199246 AK297190 AK312913 BC007093 BX538035 D78341 L49504 BC000196	431469	+	AB528197 AM392736 AM393438 FJ215684 AK094647 TSC_hg19_v1_chr5_-_162887097	453926	-	AK311957 TSC_hg19_v1_chr5_-_162887119 BC017934 BX538290 NM_145266	453981	-	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127647|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK316234|CCNG1|900|cyclin G1##NM_004060|CCNG1|900|cyclin G1##NM_199246|CCNG1|900|cyclin G1##AK297190|CCNG1|900|cyclin G1##AK312913|CCNG1|900|cyclin G1##BC007093|CCNG1|900|cyclin G1##BX538035|CCNG1|900|cyclin G1##D78341|CCNG1|900|cyclin G1##L49504|CCNG1|900|cyclin G1##BC000196|CCNG1|900|cyclin G1##AM392736|NUDCD2|134492|NudC domain containing 2##AM393438|NUDCD2|134492|NudC domain containing 2##FJ215684|NUDCD2|134492|NudC domain containing 2##AK311957|NUDCD2|134492|NudC domain containing 2##BC017934|NUDCD2|134492|NudC domain containing 2##BX538290|NUDCD2|134492|NudC domain containing 2##NM_145266|NUDCD2|134492|NudC domain containing 2	0.993866	CTCF.p2:10:0.994
chr1	238593129	238593258	reg1030046.p1	4.890	+	AK314151 NM_021186	-538972	-	NM_001035 X98330 Y08218	-1387420	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-1634358	+	TSC_hg19_v1_chr1_+_239550016 AK056349	956749	+	AF279779 NM_000740	1199179	+	TSC_hg19_v1_chr1_+_240255182 NM_020066	1661984	+	AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_020066|FMN2|56776|formin 2	0.0	
chr12	86317678	86317790	reg1026584.p1	4.890	+	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	-49608	+	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	-87497	-	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	-87689	-	BC035851 NM_013244	914923	-	AL833338 BC062424 AK093140 AX747948 NM_152589	2105426	-	TSC_hg19_v1_chr12_+_88429312 AK095477 NM_001009894 CR936776 AK311222 BC058014 BX640968 BX537868 BX648026 AK311153 BC035136 BC092422 AB590923 AM392924 AL137488	2111652	+	AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##AL833338|C12orf50|160419|chromosome 12 open reading frame 50##BC062424|C12orf50|160419|chromosome 12 open reading frame 50##AK093140|C12orf50|160419|chromosome 12 open reading frame 50##NM_152589|C12orf50|160419|chromosome 12 open reading frame 50##AK095477|C12orf29|91298|chromosome 12 open reading frame 29##NM_001009894|C12orf29|91298|chromosome 12 open reading frame 29##CR936776|C12orf29|91298|chromosome 12 open reading frame 29##AK311222|C12orf29|91298|chromosome 12 open reading frame 29##BC058014|C12orf29|91298|chromosome 12 open reading frame 29##BX640968|C12orf29|91298|chromosome 12 open reading frame 29##BX537868|C12orf29|91298|chromosome 12 open reading frame 29##BX648026|C12orf29|91298|chromosome 12 open reading frame 29##AK311153|C12orf29|91298|chromosome 12 open reading frame 29##BC035136|C12orf29|91298|chromosome 12 open reading frame 29##BC092422|C12orf29|91298|chromosome 12 open reading frame 29##AM392924|C12orf29|91298|chromosome 12 open reading frame 29##AL137488|C12orf29|91298|chromosome 12 open reading frame 29	0.93979	CTCF.p2:-25:0.940
chr15	65325508	65325639	reg1016134.p1	4.890	+	TSC_hg19_v1_chr15_-_65321968 AK055688 AB590989 BC016630 BC033687 AK301390 NM_139242	-3610	-	TSC_hg19_v1_chr15_-_65282253 AK301362 NM_001127890 NM_016630	-43327	-	TSC_hg19_v1_chr15_-_65282170 AK172849 AK225527 AK312943 BC000244	-43439	-	NM_178859 AK129601	12182	+	CU691030 AK314914 AK296261 TSC_hg19_v1_chr15_-_65360286 AF233588	34658	-	BC053734 TSC_hg19_v1_chr15_-_65360332 NM_016563	34769	-	AK055688|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##BC016630|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##BC033687|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##AK301390|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##NM_139242|MTFMT|123263|mitochondrial methionyl-tRNA formyltransferase##AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_178859|OSTBETA|123264|organic solute transporter beta##AK129601|OSTBETA|123264|organic solute transporter beta##AK314914|RASL12|51285|RAS-like, family 12##AK296261|RASL12|51285|RAS-like, family 12##AF233588|RASL12|51285|RAS-like, family 12##BC053734|RASL12|51285|RAS-like, family 12##NM_016563|RASL12|51285|RAS-like, family 12	0.871602	CTCF.p2:94:0.839
chr16	4567952	4568055	reg1028111.p1	4.890	+	AK311295 BC007604 TSC_hg19_v1_chr16_-_4563123	-4952	-	AK093388 NM_001127205	-22145	+	NM_001127204 NM_002134 AK313660 TSC_hg19_v1_chr16_+_4526411 BC002396 S34389 AK222629	-41600	+	TSC_hg19_v1_chr16_-_4588442 AF195661 AL833853 NM_001199054	20434	-	TSC_hg19_v1_chr16_-_4588775 BC002882 AK292036 AK302297 AL136698 AK294257 DQ167023 NM_001199055 NM_001199056 NM_013399 AK307067 AK308532	20789	-	NM_001145011	38487	+	AK311295|C16orf5|29965|chromosome 16 open reading frame 5##BC007604|C16orf5|29965|chromosome 16 open reading frame 5##AK093388|HMOX2|3163|heme oxygenase (decycling) 2##NM_001127205|HMOX2|3163|heme oxygenase (decycling) 2##NM_001127204|HMOX2|3163|heme oxygenase (decycling) 2##NM_002134|HMOX2|3163|heme oxygenase (decycling) 2##AK313660|HMOX2|3163|heme oxygenase (decycling) 2##BC002396|HMOX2|3163|heme oxygenase (decycling) 2##S34389|HMOX2|3163|heme oxygenase (decycling) 2##AK222629|HMOX2|3163|heme oxygenase (decycling) 2##AF195661|C16orf5|29965|chromosome 16 open reading frame 5##AL833853|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199054|C16orf5|29965|chromosome 16 open reading frame 5##BC002882|C16orf5|29965|chromosome 16 open reading frame 5##AK292036|C16orf5|29965|chromosome 16 open reading frame 5##AK302297|C16orf5|29965|chromosome 16 open reading frame 5##AL136698|C16orf5|29965|chromosome 16 open reading frame 5##AK294257|C16orf5|29965|chromosome 16 open reading frame 5##DQ167023|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199055|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199056|C16orf5|29965|chromosome 16 open reading frame 5##NM_013399|C16orf5|29965|chromosome 16 open reading frame 5##AK307067|C16orf5|29965|chromosome 16 open reading frame 5##AK308532|C16orf5|29965|chromosome 16 open reading frame 5##NM_001145011|C16orf96|342346|chromosome 16 open reading frame 96	0.679756	CTCF.p2:-19:0.680
chr17	19337408	19337474	reg1037747.p2	4.890	+	AK309372 NM_007148 AK313844 AK226052 BC038896 BC053989 AB026054 AB590107 EU446727	-22837	+	L38486 TSC_hg19_v1_chr17_-_19290504 BC047725 AK293056 AK304528 NM_001198695 NM_002404	-46940	-	TSC_hg19_v1_chr17_+_19282061 AY534741 AB527827 HQ257997	-55306	+	AK301854 TSC_hg19_v1_chr17_+_19437179 AK222625 AK001709 AK302620 NM_018242 BC022390 AK225360 BC010661 BC058882 BC050592 CU691318	99753	+	U46689 TSC_hg19_v1_chr17_+_19552087 NM_000382 NM_001031806 AK292381 L47162 AK025677 AK315096 BC002430 DQ895880 EU176377 CR457422 AB208894	214702	+	BC062614 AB250364 AB250701 BC035288 BC050578 AK055758 AK307647 NM_001099646 NM_152908	282519	-	AK309372|RNF112|7732|ring finger protein 112##NM_007148|RNF112|7732|ring finger protein 112##AK313844|RNF112|7732|ring finger protein 112##AK226052|RNF112|7732|ring finger protein 112##BC038896|RNF112|7732|ring finger protein 112##BC053989|RNF112|7732|ring finger protein 112##AB026054|RNF112|7732|ring finger protein 112##EU446727|RNF112|7732|ring finger protein 112##L38486|MFAP4|4239|microfibrillar-associated protein 4##BC047725|MFAP4|4239|microfibrillar-associated protein 4##AK293056|MFAP4|4239|microfibrillar-associated protein 4##AK304528|MFAP4|4239|microfibrillar-associated protein 4##NM_001198695|MFAP4|4239|microfibrillar-associated protein 4##NM_002404|MFAP4|4239|microfibrillar-associated protein 4##AY534741|MAPK7|5598|mitogen-activated protein kinase 7##HQ257997|MAPK7|5598|mitogen-activated protein kinase 7##AK301854|SLC47A1|55244|solute carrier family 47, member 1##AK222625|SLC47A1|55244|solute carrier family 47, member 1##AK001709|SLC47A1|55244|solute carrier family 47, member 1##AK302620|SLC47A1|55244|solute carrier family 47, member 1##NM_018242|SLC47A1|55244|solute carrier family 47, member 1##AK225360|SLC47A1|55244|solute carrier family 47, member 1##BC010661|SLC47A1|55244|solute carrier family 47, member 1##BC058882|SLC47A1|55244|solute carrier family 47, member 1##BC050592|SLC47A1|55244|solute carrier family 47, member 1##U46689|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_000382|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_001031806|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK292381|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##L47162|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK025677|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK315096|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC002430|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##DQ895880|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##EU176377|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##CR457422|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AB208894|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC062614|SLC47A2|146802|solute carrier family 47, member 2##AB250364|SLC47A2|146802|solute carrier family 47, member 2##AB250701|SLC47A2|146802|solute carrier family 47, member 2##BC035288|SLC47A2|146802|solute carrier family 47, member 2##BC050578|SLC47A2|146802|solute carrier family 47, member 2##AK055758|SLC47A2|146802|solute carrier family 47, member 2##AK307647|SLC47A2|146802|solute carrier family 47, member 2##NM_001099646|SLC47A2|146802|solute carrier family 47, member 2##NM_152908|SLC47A2|146802|solute carrier family 47, member 2	0.0	
chr18	24878471	24878638	reg1026941.p1	4.890	+	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-113321	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	-155675	-	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	-432838	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	878483	-	TSC_hg19_v1_chr18_-_25757363 NM_001792	878843	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	3744148	-	AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3	0.095358	
chr19	39903416	39903547	reg1003919.p3	4.890	+	TSC_hg19_v1_chr19_+_39899749 AJ227917	-3688	+	TSC_hg19_v1_chr19_+_39897486 AK314042 M92843 NM_003407 BC009693 M63625 EU446714 EU832179 EU832272 CU679443	-5707	+	TSC_hg19_v1_chr19_+_39882046 AL137304 AK000411 AK298014 BC019015 AK092909 AX747802 AK124629 AK316010 AK090877 AK297772 AX746660 AK294667	-21443	+	AK024429 NM_022835	268	+	CU678668 CU687136 DQ893449 DQ896219 TSC_hg19_v1_chr19_-_39926589 BC024970 BC007977 BC071674 M60854 BC095429 BC004324 AK055869 AK315498 D28392 NM_001020	23095	-	NM_001111020 NM_001130824 NM_001130825 TSC_hg19_v1_chr19_+_39936212 AB000516	32717	+	AK314042|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##M92843|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##NM_003407|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##BC009693|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##M63625|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU446714|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU832179|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU832272|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##AL137304|MED29|55588|mediator complex subunit 29##AK000411|MED29|55588|mediator complex subunit 29##AK298014|MED29|55588|mediator complex subunit 29##BC019015|MED29|55588|mediator complex subunit 29##AK092909|MED29|55588|mediator complex subunit 29##AK124629|MED29|55588|mediator complex subunit 29##AK316010|MED29|55588|mediator complex subunit 29##AK090877|MED29|55588|mediator complex subunit 29##AK297772|MED29|55588|mediator complex subunit 29##AK294667|MED29|55588|mediator complex subunit 29##AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2##NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2##DQ893449|RPS16|6217|ribosomal protein S16##DQ896219|RPS16|6217|ribosomal protein S16##BC024970|RPS16|6217|ribosomal protein S16##BC007977|RPS16|6217|ribosomal protein S16##BC071674|RPS16|6217|ribosomal protein S16##M60854|RPS16|6217|ribosomal protein S16##BC095429|RPS16|6217|ribosomal protein S16##BC004324|RPS16|6217|ribosomal protein S16##AK055869|RPS16|6217|ribosomal protein S16##AK315498|RPS16|6217|ribosomal protein S16##D28392|RPS16|6217|ribosomal protein S16##NM_001020|RPS16|6217|ribosomal protein S16##NM_001111020|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##NM_001130824|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##NM_001130825|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##AB000516|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)	0.920591	CTCF.p2:3:0.921
chr3	27509168	27509298	reg1029428.p2	4.890	+	AF047033 AF089726 NM_003615	-10989	-	TSC_hg19_v1_chr3_-_27410884 AK123061 NM_199347	-98320	-	BC067784 TSC_hg19_v1_chr3_+_26664296 AF396933 NM_052953	-844933	+	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	16592	-	TSC_hg19_v1_chr3_-_27525893 AK309734	16697	-	AB031038 BC131712 NM_005442 AB463608 BC037568	254560	-	AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AK123061|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##NM_199347|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##BC067784|LRRC3B|116135|leucine rich repeat containing 3B##AF396933|LRRC3B|116135|leucine rich repeat containing 3B##NM_052953|LRRC3B|116135|leucine rich repeat containing 3B##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin	0.905799	CTCF.p2:19:0.906
chr10	126681212	126681351	reg1030690.p1	4.889	+	NM_017580	-50590	+	NM_032182 TSC_hg19_v1_chr10_+_126490387 AK296677 D63877 BC008999	-190909	+	TSC_hg19_v1_chr10_-_126480455 CU693146 AL832292 AF318345 BC026167 NM_212554	-200877	-	AF222711 NM_022802	35171	-	TSC_hg19_v1_chr10_-_126849010 AF016507 BC072020	167745	-	BC052276 AL833398 BC002486 TSC_hg19_v1_chr10_-_126849101 NM_001329	167835	-	NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1##NM_032182|FAM175B|23172|family with sequence similarity 175, member B##AK296677|FAM175B|23172|family with sequence similarity 175, member B##D63877|FAM175B|23172|family with sequence similarity 175, member B##BC008999|FAM175B|23172|family with sequence similarity 175, member B##AL832292|METTL10|399818|methyltransferase like 10##AF318345|METTL10|399818|methyltransferase like 10##BC026167|METTL10|399818|methyltransferase like 10##NM_212554|METTL10|399818|methyltransferase like 10##AF222711|CTBP2|1488|C-terminal binding protein 2##NM_022802|CTBP2|1488|C-terminal binding protein 2##AF016507|CTBP2|1488|C-terminal binding protein 2##BC072020|CTBP2|1488|C-terminal binding protein 2##BC052276|CTBP2|1488|C-terminal binding protein 2##AL833398|CTBP2|1488|C-terminal binding protein 2##BC002486|CTBP2|1488|C-terminal binding protein 2##NM_001329|CTBP2|1488|C-terminal binding protein 2	0.124247	
chr7	18610652	18610752	reg1029980.p1	4.889	+	TSC_hg19_v1_chr7_+_18548965 AK304343	-61733	+	NM_001204147 NM_001204148 TSC_hg19_v1_chr7_+_18548932 AK304410	-61779	+	CR749550 EU832154 EU832248 TSC_hg19_v1_chr7_+_18535882 NM_058176 NM_178425 AB385379 AY032737 AY032738 AY197371 EU832247 BC111735	-74831	+	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	546576	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	574311	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	1137944	-	AK304343|HDAC9|9734|histone deacetylase 9##NM_001204147|HDAC9|9734|histone deacetylase 9##NM_001204148|HDAC9|9734|histone deacetylase 9##AK304410|HDAC9|9734|histone deacetylase 9##CR749550|HDAC9|9734|histone deacetylase 9##EU832154|HDAC9|9734|histone deacetylase 9##EU832248|HDAC9|9734|histone deacetylase 9##NM_058176|HDAC9|9734|histone deacetylase 9##NM_178425|HDAC9|9734|histone deacetylase 9##AY032737|HDAC9|9734|histone deacetylase 9##AY032738|HDAC9|9734|histone deacetylase 9##AY197371|HDAC9|9734|histone deacetylase 9##EU832247|HDAC9|9734|histone deacetylase 9##BC111735|HDAC9|9734|histone deacetylase 9##BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor	0.975819	CTCF.p2:0:0.976
chr7	25608647	25608749	reg1028687.p2	4.889	+	AB040290 AF330057 AF440392 NM_022150	-340618	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-388827	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-443758	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	583235	+	TSC_hg19_v1_chr7_-_26232151 BX538099	623453	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	631643	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.900786	CTCF.p2:-7:0.901
chr4	169926954	169927102	reg1031585.p1	4.888	+	TSC_hg19_v1_chr4_+_169753245 NM_001166110 AB023209	-173851	+	TSC_hg19_v1_chr4_+_169552755 NM_001166109 AK095512	-374232	+	TSC_hg19_v1_chr4_+_169418204 AF464873 NM_001166108 NM_016081 BC140850 BC144666	-508808	+	BC021973 BC033650 TSC_hg19_v1_chr4_-_169931407 AK027337 AK291756 AK299847 AL833393 NM_032783	4430	-	BC041023 TSC_hg19_v1_chr4_-_170077830	150791	-	TSC_hg19_v1_chr4_-_170192099 BC053671	265019	-	NM_001166110|PALLD|23022|palladin, cytoskeletal associated protein##AB023209|PALLD|23022|palladin, cytoskeletal associated protein##NM_001166109|PALLD|23022|palladin, cytoskeletal associated protein##AK095512|PALLD|23022|palladin, cytoskeletal associated protein##AF464873|PALLD|23022|palladin, cytoskeletal associated protein##NM_001166108|PALLD|23022|palladin, cytoskeletal associated protein##NM_016081|PALLD|23022|palladin, cytoskeletal associated protein##BC140850|PALLD|23022|palladin, cytoskeletal associated protein##BC144666|PALLD|23022|palladin, cytoskeletal associated protein##BC021973|CBR4|84869|carbonyl reductase 4##BC033650|CBR4|84869|carbonyl reductase 4##AK027337|CBR4|84869|carbonyl reductase 4##AK291756|CBR4|84869|carbonyl reductase 4##AL833393|CBR4|84869|carbonyl reductase 4##NM_032783|CBR4|84869|carbonyl reductase 4##BC041023|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1	0.0	
chr6	152677964	152678080	reg1025884.p1	4.888	+	TSC_hg19_v1_chr6_-_152623240 AK310977	-54771	-	X03635 AK304833 M69297 AF258449 AF258450 AF258451 NM_000125 TSC_hg19_v1_chr6_+_152128813 BC128573 BC128574 EU930361 AB587448 AB307713 AY750962 JF810888 U47678	-549156	+	NM_001122740 U68067	-549569	+	TSC_hg19_v1_chr6_-_152702331 BX537517	24319	-	AK056122 TSC_hg19_v1_chr6_-_152702456 BC039121	24452	-	AF535142 NM_033071 TSC_hg19_v1_chr6_-_152958011	280020	-	AK310977|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##X03635|ESR1|2099|estrogen receptor 1##AK304833|ESR1|2099|estrogen receptor 1##M69297|ESR1|2099|estrogen receptor 1##AF258449|ESR1|2099|estrogen receptor 1##AF258450|ESR1|2099|estrogen receptor 1##AF258451|ESR1|2099|estrogen receptor 1##NM_000125|ESR1|2099|estrogen receptor 1##BC128573|ESR1|2099|estrogen receptor 1##BC128574|ESR1|2099|estrogen receptor 1##AB307713|ESR1|2099|estrogen receptor 1##AY750962|ESR1|2099|estrogen receptor 1##JF810888|ESR1|2099|estrogen receptor 1##U47678|ESR1|2099|estrogen receptor 1##NM_001122740|ESR1|2099|estrogen receptor 1##U68067|ESR1|2099|estrogen receptor 1##BX537517|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AK056122|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##BC039121|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	0.700314	CTCF.p2:3:0.700
chr12	7869139	7869271	reg1025299.p1	4.887	+	AY317075 NM_199286 BC125145	-5132	+	CU689052 DQ892661 DQ895901 AF110641 AF263538 NM_020634 BC030959 AY358875	-20849	-	U72890 L25877 U72891 BC101405 BC101404 BC101972 BC096158 BC096159 BC096160 BC096161 BC101973 BC144708 NM_001644	-50721	-	AF293615 NM_130441 NM_203503	32863	-	AY151139 NM_001145465	48606	+	AB093576 AK022643 NM_024865 TSC_hg19_v1_chr12_+_7942016	72800	+	AY317075|DPPA3|359787|developmental pluripotency associated 3##NM_199286|DPPA3|359787|developmental pluripotency associated 3##BC125145|STELLAR|400206|developmental pluripotency associated 3 pseudogene##DQ892661|GDF3|9573|growth differentiation factor 3##DQ895901|GDF3|9573|growth differentiation factor 3##AF110641|GDF3|9573|growth differentiation factor 3##AF263538|GDF3|9573|growth differentiation factor 3##NM_020634|GDF3|9573|growth differentiation factor 3##BC030959|GDF3|9573|growth differentiation factor 3##AY358875|GDF3|9573|growth differentiation factor 3##U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##AF293615|CLEC4C|170482|C-type lectin domain family 4, member C##NM_130441|CLEC4C|170482|C-type lectin domain family 4, member C##NM_203503|CLEC4C|170482|C-type lectin domain family 4, member C##AY151139|NANOGNB|360030|NANOG neighbor homeobox##NM_001145465|NANOGNB|360030|NANOG neighbor homeobox##AB093576|NANOG|79923|Nanog homeobox##AK022643|NANOG|79923|Nanog homeobox##NM_024865|NANOG|79923|Nanog homeobox	0.608904	CTCF.p2:-32:0.609
chr18	77724602	77724690	reg1024924.p2	4.887	+	TSC_hg19_v1_chr18_+_77724644 NM_001136180 BC040056 BC017654 BC157848	-23	+	AK301881 NM_001146343 NM_001146345 NM_025078 TSC_hg19_v1_chr18_-_77711653	-12994	-	TSC_hg19_v1_chr18_-_77711643 BC030140	-13020	-	AF146373 AB528659 AK309098 TSC_hg19_v1_chr18_-_77748548 AF023611 AF023612 BC001046 BC019272 NM_006701 AK314901	23824	-	AK308703 TSC_hg19_v1_chr18_-_77793959	69290	-	AK307212 NM_001171967 NM_024805 AK024825 TSC_hg19_v1_chr18_+_77794477 AK311463 AK311239 AF261073 AF439745 BC057772 BC014195 CU680826	69820	+	NM_001136180|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC040056|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC017654|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC157848|HSBP1L1|440498|heat shock factor binding protein 1-like 1##AK301881|PQLC1|80148|PQ loop repeat containing 1##NM_001146343|PQLC1|80148|PQ loop repeat containing 1##NM_001146345|PQLC1|80148|PQ loop repeat containing 1##NM_025078|PQLC1|80148|PQ loop repeat containing 1##BC030140|PQLC1|80148|PQ loop repeat containing 1##AF146373|TXNL4A|10907|thioredoxin-like 4A##AK309098|TXNL4A|10907|thioredoxin-like 4A##AF023611|TXNL4A|10907|thioredoxin-like 4A##AF023612|TXNL4A|10907|thioredoxin-like 4A##BC001046|TXNL4A|10907|thioredoxin-like 4A##BC019272|TXNL4A|10907|thioredoxin-like 4A##NM_006701|TXNL4A|10907|thioredoxin-like 4A##AK314901|TXNL4A|10907|thioredoxin-like 4A##AK307212|RBFA|79863|ribosome binding factor A (putative)##NM_001171967|RBFA|79863|ribosome binding factor A (putative)##NM_024805|RBFA|79863|ribosome binding factor A (putative)##AK024825|RBFA|79863|ribosome binding factor A (putative)##AK311463|RBFA|79863|ribosome binding factor A (putative)##AK311239|RBFA|79863|ribosome binding factor A (putative)##AF261073|RBFA|79863|ribosome binding factor A (putative)##AF439745|RBFA|79863|ribosome binding factor A (putative)##BC057772|RBFA|79863|ribosome binding factor A (putative)##BC014195|RBFA|79863|ribosome binding factor A (putative)	0.0	
chr19	49242220	49242314	reg1027157.p1	4.887	+	TSC_hg19_v1_chr19_-_49222963 NM_001130915 AK131427	-19301	-	AK093389 AX748093 NM_182574 BC106047	-22022	-	NM_000511 NM_001097638 AK290277 D87942 BC001899 BC121066	-43006	+	BC028614 AY378097 NM_017805 BC042111	1639	-	AB195682 BC034769 NM_182575 AK301750	7828	-	D87935 D87936 D87937 NM_000148	16379	-	NM_001130915|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator##AK131427|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator##AK093389|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator##NM_182574|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator##BC106047|MAMSTR|284358|MEF2 activating motif and SAP domain containing transcriptional regulator##NM_000511|FUT2|2524|fucosyltransferase 2 (secretor status included)##NM_001097638|FUT2|2524|fucosyltransferase 2 (secretor status included)##AK290277|FUT2|2524|fucosyltransferase 2 (secretor status included)##D87942|FUT2|2524|fucosyltransferase 2 (secretor status included)##BC001899|FUT2|2524|fucosyltransferase 2 (secretor status included)##BC121066|FUT2|2524|fucosyltransferase 2 (secretor status included)##BC028614|RASIP1|54922|Ras interacting protein 1##AY378097|RASIP1|54922|Ras interacting protein 1##NM_017805|RASIP1|54922|Ras interacting protein 1##BC042111|RASIP1|54922|Ras interacting protein 1##AB195682|IZUMO1|284359|izumo sperm-egg fusion 1##BC034769|IZUMO1|284359|izumo sperm-egg fusion 1##NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1##AK301750|IZUMO1|284359|izumo sperm-egg fusion 1##D87935|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##D87936|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##D87937|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##NM_000148|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)	0.511414	CTCF.p2:66:0.466
chr14	100745246	100745341	reg1025207.p1	4.886	+	TSC_hg19_v1_chr14_+_100705474 BC037308 M76541 BC020324 BC065366 AB464361 DQ891638 EU176600 CU691478	-39787	+	TSC_hg19_v1_chr14_+_100705309 M77698	-39981	+	NM_003403 TSC_hg19_v1_chr14_+_100705177	-40151	+	TSC_hg19_v1_chr14_-_100772779 AK096294 AK123821 AK310069 BC142945 AK172788 BX247983 NM_001039355	27546	-	AK092001 AX747302 TSC_hg19_v1_chr14_+_100789675 AB073385 AY569438 AY570298 NM_207117 BX248260 BC137253 BC137254 BC144549	44393	+	X59892 TSC_hg19_v1_chr14_-_100841685 BC095453 M61715	96398	-	BC037308|YY1|7528|YY1 transcription factor##M76541|YY1|7528|YY1 transcription factor##BC020324|YY1|7528|YY1 transcription factor##BC065366|YY1|7528|YY1 transcription factor##DQ891638|YY1|7528|YY1 transcription factor##EU176600|YY1|7528|YY1 transcription factor##M77698|YY1|7528|YY1 transcription factor##NM_003403|YY1|7528|YY1 transcription factor##AK096294|SLC25A29|123096|solute carrier family 25, member 29##AK123821|SLC25A29|123096|solute carrier family 25, member 29##AK310069|SLC25A29|123096|solute carrier family 25, member 29##AK172788|SLC25A29|123096|solute carrier family 25, member 29##BX247983|SLC25A29|123096|solute carrier family 25, member 29##NM_001039355|SLC25A29|123096|solute carrier family 25, member 29##AK092001|SLC25A47|283600|solute carrier family 25, member 47##AB073385|SLC25A47|283600|solute carrier family 25, member 47##AY569438|SLC25A47|283600|solute carrier family 25, member 47##AY570298|SLC25A47|283600|solute carrier family 25, member 47##NM_207117|SLC25A47|283600|solute carrier family 25, member 47##BX248260|SLC25A47|283600|solute carrier family 25, member 47##BC137253|SLC25A47|283600|solute carrier family 25, member 47##BC137254|SLC25A47|283600|solute carrier family 25, member 47##BC144549|SLC25A47|283600|solute carrier family 25, member 47##X59892|WARS|7453|tryptophanyl-tRNA synthetase##BC095453|WARS|7453|tryptophanyl-tRNA synthetase##M61715|WARS|7453|tryptophanyl-tRNA synthetase	0.743779	CTCF.p2:11:0.744
chr16	84341886	84341983	reg1027526.p1	4.886	+	AF302109 NM_021197 AF169631 TSC_hg19_v1_chr16_+_84328440 AK075061 BC029159 DQ893365 DQ896682	-13446	+	BC109203 BC008969 NM_172347	-68605	-	NM_001145400 NM_139174 AK093046 AX747882 AF447586 BC033491 AK315171 CU689630	-117156	+	TSC_hg19_v1_chr16_+_84402143 AK300526 AY791884 BX648333 NM_014861 AK316128 CR749829	60208	+	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	196357	-	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	309642	-	AF302109|WFDC1|58189|WAP four-disulfide core domain 1##NM_021197|WFDC1|58189|WAP four-disulfide core domain 1##AF169631|WFDC1|58189|WAP four-disulfide core domain 1##AK075061|WFDC1|58189|WAP four-disulfide core domain 1##BC029159|WFDC1|58189|WAP four-disulfide core domain 1##DQ893365|WFDC1|58189|WAP four-disulfide core domain 1##DQ896682|WFDC1|58189|WAP four-disulfide core domain 1##BC109203|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##BC008969|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##NM_172347|KCNG4|93107|potassium voltage-gated channel, subfamily G, member 4##NM_001145400|ADAD2|161931|adenosine deaminase domain containing 2##NM_139174|ADAD2|161931|adenosine deaminase domain containing 2##AK093046|ADAD2|161931|adenosine deaminase domain containing 2##AF447586|ADAD2|161931|adenosine deaminase domain containing 2##BC033491|ADAD2|161931|adenosine deaminase domain containing 2##AK315171|ADAD2|161931|adenosine deaminase domain containing 2##AK300526|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AY791884|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BX648333|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##NM_014861|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AK316128|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##CR749829|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)	0.997055	CTCF.p2:-10:0.997
chr6	21593976	21594100	reg1024472.p2	4.886	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1059315	+	CR749285 NM_001243076	-1190005	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-1191935	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	334	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	72621	+	BC015850 NM_000948	703691	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.0	
chr12	88504981	88505111	reg1027852.p1	4.885	+	TSC_hg19_v1_chr12_+_88429312 AK095477 NM_001009894 CR936776 AK311222 BC058014 BX640968 BX537868 BX648026 AK311153 BC035136 BC092422 AB590923 AM392924 AL137488	-75660	+	AL833338 BC062424 AK093140 AX747948 NM_152589	-81886	-	BC035851 NM_013244	-1272389	-	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	30823	-	TSC_hg19_v1_chr12_+_88536083 AK290436 AK302755 AK310375 AK310393 NM_181783 CR749309 BX538169 CR749244 CR933632 AJ697717 BC117177 BC117175	31102	+	BC074725 AK293002 AF119835 AF400437 BC126166 BC143899 BC069797 BC069733 BC069783 TSC_hg19_v1_chr12_-_88974249 AF400436 M59964 AK290319 NM_000899 NM_003994	469126	-	AK095477|C12orf29|91298|chromosome 12 open reading frame 29##NM_001009894|C12orf29|91298|chromosome 12 open reading frame 29##CR936776|C12orf29|91298|chromosome 12 open reading frame 29##AK311222|C12orf29|91298|chromosome 12 open reading frame 29##BC058014|C12orf29|91298|chromosome 12 open reading frame 29##BX640968|C12orf29|91298|chromosome 12 open reading frame 29##BX537868|C12orf29|91298|chromosome 12 open reading frame 29##BX648026|C12orf29|91298|chromosome 12 open reading frame 29##AK311153|C12orf29|91298|chromosome 12 open reading frame 29##BC035136|C12orf29|91298|chromosome 12 open reading frame 29##BC092422|C12orf29|91298|chromosome 12 open reading frame 29##AM392924|C12orf29|91298|chromosome 12 open reading frame 29##AL137488|C12orf29|91298|chromosome 12 open reading frame 29##AL833338|C12orf50|160419|chromosome 12 open reading frame 50##BC062424|C12orf50|160419|chromosome 12 open reading frame 50##AK093140|C12orf50|160419|chromosome 12 open reading frame 50##NM_152589|C12orf50|160419|chromosome 12 open reading frame 50##BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa##AK290436|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK302755|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310375|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310393|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##NM_181783|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749309|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BX538169|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749244|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR933632|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AJ697717|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117177|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117175|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC074725|KITLG|4254|KIT ligand##AK293002|KITLG|4254|KIT ligand##AF119835|KITLG|4254|KIT ligand##AF400437|KITLG|4254|KIT ligand##BC126166|KITLG|4254|KIT ligand##BC143899|KITLG|4254|KIT ligand##BC069797|KITLG|4254|KIT ligand##BC069733|KITLG|4254|KIT ligand##BC069783|KITLG|4254|KIT ligand##AF400436|KITLG|4254|KIT ligand##M59964|KITLG|4254|KIT ligand##AK290319|KITLG|4254|KIT ligand##NM_000899|KITLG|4254|KIT ligand##NM_003994|KITLG|4254|KIT ligand	0.491021	CTCF.p2:-15:0.491
chr6	137114594	137114774	reg1005307.p4	4.885	+	TSC_hg19_v1_chr6_-_137113721 AB209093	-942	-	TSC_hg19_v1_chr6_-_137113641 NM_005923 U67156 BC088829	-1044	-	BC054503 TSC_hg19_v1_chr6_-_137113611	-1074	-	TSC_hg19_v1_chr6_+_137143699 NM_000288 BC031606 U88871	29018	+	TSC_hg19_v1_chr6_+_137143749 U76560 BC006268 AB529018 CR542054 CR542076 CU675317 CU689196	29091	+	AK316095 BC087842 NM_001008783 AK295424	128769	+	AB209093|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##NM_005923|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##U67156|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##BC088829|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##BC054503|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##NM_000288|PEX7|5191|peroxisomal biogenesis factor 7##BC031606|PEX7|5191|peroxisomal biogenesis factor 7##U88871|PEX7|5191|peroxisomal biogenesis factor 7##U76560|PEX7|5191|peroxisomal biogenesis factor 7##BC006268|PEX7|5191|peroxisomal biogenesis factor 7##CR542054|PEX7|5191|peroxisomal biogenesis factor 7##CR542076|PEX7|5191|peroxisomal biogenesis factor 7##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3	0.0	
chr9	132250221	132250402	reg1029284.p2	4.885	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-167016	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-309771	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-309804	-	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	1043	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	1130	+	BC112353 AK093122 AX747938 NM_199350	132726	-	AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50	0.0	
chrX	102155636	102155759	reg1031453.p1	4.885	+	TSC_hg19_v1_chrX_+_102024107 BC040959	-131615	+	NM_001142529 NM_001142530	-154791	+	NM_001142524 NM_001142525 NM_001142526 NM_001142527 NM_001142528 NM_030639 BC041409	-180050	+	BC101169 BC101170 BC101171 BC101172 NM_001031834	36502	+	AF220189 AY833561 TSC_hg19_v1_chrX_-_102319085	163385	-	TSC_hg19_v1_chrX_-_102319100 AF237783 AK290958 NM_018476	163434	-	BC040959|LOC100287765|100287765|uncharacterized LOC100287765##NM_001142529|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142530|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142524|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142525|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142526|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142527|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_001142528|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##NM_030639|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##BC041409|BHLHB9|80823|basic helix-loop-helix domain containing, class B, 9##BC101169|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC101170|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC101171|RAB40AL|282808|RAB40A, member RAS oncogene family-like##BC101172|RAB40AL|282808|RAB40A, member RAS oncogene family-like##NM_001031834|RAB40AL|282808|RAB40A, member RAS oncogene family-like##AF220189|BEX1|55859|brain expressed, X-linked 1##AY833561|BEX1|55859|brain expressed, X-linked 1##AF237783|BEX1|55859|brain expressed, X-linked 1##AK290958|BEX1|55859|brain expressed, X-linked 1##NM_018476|BEX1|55859|brain expressed, X-linked 1	0.951764	CTCF.p2:28:0.952
chr11	3300353	3300459	reg1026371.p1	4.884	+	AK293940 NM_001039165	-46791	-	AB529240 AY255583 NM_001164377	-60364	-	TSC_hg19_v1_chr11_-_3186559 NM_001144063 NM_020896 NM_145638	-113837	-	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	99973	-	NM_053017 NM_001079536 Y16835	363108	-	BC017828 BC069102 NM_004314 S74683 BC111729	365964	+	AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##NM_001144063|OSBPL5|114879|oxysterol binding protein-like 5##NM_020896|OSBPL5|114879|oxysterol binding protein-like 5##NM_145638|OSBPL5|114879|oxysterol binding protein-like 5##BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195##NM_053017|ART5|116969|ADP-ribosyltransferase 5##NM_001079536|ART5|116969|ADP-ribosyltransferase 5##Y16835|ART5|116969|ADP-ribosyltransferase 5##BC017828|ART1|417|ADP-ribosyltransferase 1##BC069102|ART1|417|ADP-ribosyltransferase 1##NM_004314|ART1|417|ADP-ribosyltransferase 1##S74683|ART1|417|ADP-ribosyltransferase 1##BC111729|ART1|417|ADP-ribosyltransferase 1	1.970903	CTCF.p2:18:0.976	CTCF.p2:-32:0.995
chr2	233232345	233232426	reg1026120.p1	4.884	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-406025	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	-441352	-	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-581269	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	10998	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	39191	+	AK313163 NM_001631 BC132678 M31008 M15694	88485	+	AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal	0.141371	
chr5	55777761	55777865	reg1026859.p2	4.884	+	AK123389 NM_024669	-248628	-	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-487050	-	NM_001242636 NM_001242639	-628664	+	NM_005921	333086	+	TSC_hg19_v1_chr5_+_56111375 AK307828	333551	+	TSC_hg19_v1_chr5_+_56111395 AF042838	333605	+	AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.118713	
chr6_cox_hap2	503845	503931	reg1023794.p1	4.884	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999391	CTCF.p2:1:0.999
chr1	209686796	209686891	reg1027227.p1	4.883	+	AK091113 AX746785 NM_001104548	-84678	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-1269194	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-1602286	-	NM_020439 AK095713 AK289675 AF428261 BC032787	70217	+	TSC_hg19_v1_chr1_-_209824718 NM_001017402	137836	-	L25541 NM_001127641 D37766 TSC_hg19_v1_chr1_-_209825771 AK296851 AK309524	138881	-	NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_025179|PLXNA2|5362|plexin A2##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001017402|LAMB3|3914|laminin, beta 3##L25541|LAMB3|3914|laminin, beta 3##NM_001127641|LAMB3|3914|laminin, beta 3##D37766|LAMB3|3914|laminin, beta 3##AK296851|LAMB3|3914|laminin, beta 3##AK309524|LAMB3|3914|laminin, beta 3	0.325776	CTCF.p2:8:0.326
chr16	452007	452129	reg1026498.p1	4.883	+	TSC_hg19_v1_chr16_+_451944 AJ293009 CU679809	-121	+	TSC_hg19_v1_chr16_+_451884 AK055839 NM_020664 BC010740 AK128012 AK225961 BC030226	-184	+	TSC_hg19_v1_chr16_+_447198 BC017067 NM_005009 BC004880 Y07604 AB528678 BT019438	-4857	+	TSC_hg19_v1_chr16_+_475616 AB014565 AF395731	23547	+	TSC_hg19_v1_chr16_+_475648 BC051360 NM_014700	23584	+	TSC_hg19_v1_chr16_+_524843 AK303061 NM_001142272	72781	+	AJ293009|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##AK055839|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##NM_020664|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##BC010740|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##AK128012|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##AK225961|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##BC030226|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##BC017067|NME4|4833|non-metastatic cells 4, protein expressed in##NM_005009|NME4|4833|non-metastatic cells 4, protein expressed in##BC004880|NME4|4833|non-metastatic cells 4, protein expressed in##Y07604|NME4|4833|non-metastatic cells 4, protein expressed in##BT019438|NME4|4833|non-metastatic cells 4, protein expressed in##AB014565|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##AF395731|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##BC051360|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##NM_014700|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##AK303061|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##NM_001142272|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)	0.543417	CTCF.p2:43:0.543
chr17	39013412	39013521	reg1029875.p1	4.883	+	J04029 AB590331 DQ893356 DQ896675 BC034697 NM_000421 TSC_hg19_v1_chr17_-_38978867	-34619	-	NM_001195387 TSC_hg19_v1_chr17_+_38975396 NM_145274 BC015365 AK298616 AK097454 NM_001195386	-38077	+	AB463813 AJ564207 AK129827 NM_181535	-57288	-	D78367 NM_000223 AK313747	10002	-	AB528550 DQ890783 DQ896754 BC031559 TSC_hg19_v1_chr17_-_39041495 AK312744 NM_019010	28000	-	AK314604 DQ891640 DQ894829 AK002047 TSC_hg19_v1_chr17_-_39092916 AF102848 AK289449 AK310880	79434	-	J04029|KRT10|3858|keratin 10##DQ893356|KRT10|3858|keratin 10##DQ896675|KRT10|3858|keratin 10##BC034697|KRT10|3858|keratin 10##NM_000421|KRT10|3858|keratin 10##NM_001195387|TMEM99|147184|transmembrane protein 99##NM_145274|TMEM99|147184|transmembrane protein 99##BC015365|TMEM99|147184|transmembrane protein 99##AK298616|TMEM99|147184|transmembrane protein 99##AK097454|TMEM99|147184|transmembrane protein 99##NM_001195386|TMEM99|147184|transmembrane protein 99##AJ564207|KRT28|162605|keratin 28##AK129827|KRT28|162605|keratin 28##NM_181535|KRT28|162605|keratin 28##D78367|KRT12|3859|keratin 12##NM_000223|KRT12|3859|keratin 12##AK313747|KRT12|3859|keratin 12##DQ890783|KRT20|54474|keratin 20##DQ896754|KRT20|54474|keratin 20##BC031559|KRT20|54474|keratin 20##AK312744|KRT20|54474|keratin 20##NM_019010|KRT20|54474|keratin 20##AK314604|KRT23|25984|keratin 23 (histone deacetylase inducible)##DQ891640|KRT23|25984|keratin 23 (histone deacetylase inducible)##DQ894829|KRT23|25984|keratin 23 (histone deacetylase inducible)##AK002047|KRT23|25984|keratin 23 (histone deacetylase inducible)##AF102848|KRT23|25984|keratin 23 (histone deacetylase inducible)##AK289449|KRT23|25984|keratin 23 (histone deacetylase inducible)##AK310880|KRT23|25984|keratin 23 (histone deacetylase inducible)	0.973283	CTCF.p2:-48:0.973
chr5	109961231	109961327	reg1024831.p1	4.883	+	AK314090 TSC_hg19_v1_chr5_+_109025749 BC142656 BC142696	-935520	+	D63998 TSC_hg19_v1_chr5_+_109025627	-935638	+	TSC_hg19_v1_chr5_+_109025138 NM_002372	-936134	+	AK296542 BC042563 BX648527 NM_001039763	101128	-	TSC_hg19_v1_chr5_+_110074720 AK091427	113444	+	TSC_hg19_v1_chr5_+_110074741 AK300123 BC017169 NM_138773 M74089 AK290217 AB529063	113501	+	AK314090|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##BC142656|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##BC142696|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##D63998|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##AK296542|TMEM232|642987|transmembrane protein 232##BC042563|TMEM232|642987|transmembrane protein 232##BX648527|TMEM232|642987|transmembrane protein 232##NM_001039763|TMEM232|642987|transmembrane protein 232##AK091427|SLC25A46|91137|solute carrier family 25, member 46##AK300123|SLC25A46|91137|solute carrier family 25, member 46##BC017169|SLC25A46|91137|solute carrier family 25, member 46##NM_138773|SLC25A46|91137|solute carrier family 25, member 46##M74089|SLC25A46|91137|solute carrier family 25, member 46##AK290217|SLC25A46|91137|solute carrier family 25, member 46	0.933311	CTCF.p2:11:0.933
chr11	133004722	133004903	reg1001661.p2	4.882	+	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-191207	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-191798	-	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1223473	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	397502	-	AF521713 AK098717 NM_174927 BC058039	710569	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	822070	-	AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B	0.0	
chr16	10762396	10762505	reg1029668.p2	4.882	+	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	-87960	-	NM_024997 BC137079 BC144468	-239710	+	AK093414 AX748112 TSC_hg19_v1_chr16_+_10479917 AK296565 AK299040 BC033891 BC041882	-282533	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	26315	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	75254	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	150098	-	AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A	0.0	
chr1	9161499	9161663	reg1000585.p1	4.882	+	TSC_hg19_v1_chr1_-_9129695 M55531 AK290398 AK294368 NM_001135585 NM_003039	-31805	-	TSC_hg19_v1_chr1_-_9129644 AK289849 BC001692 BC001820 AK295785 BC035878	-31940	-	TSC_hg19_v1_chr1_-_9129605 DQ892291 DQ895491 CU674838 AK300091	-31982	-	DQ892804 DQ896051 TSC_hg19_v1_chr1_-_9189169 AK022194 AK292888 AK304154 AY768808 NM_024980 BC094733 BC018691	27640	-	TSC_hg19_v1_chr1_+_9294832 BC081559	133234	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	133336	+	M55531|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK290398|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK294368|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_001135585|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_003039|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK289849|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001692|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001820|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK295785|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC035878|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892291|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ895491|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK300091|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892804|GPR157|80045|G protein-coupled receptor 157##DQ896051|GPR157|80045|G protein-coupled receptor 157##AK022194|GPR157|80045|G protein-coupled receptor 157##AK292888|GPR157|80045|G protein-coupled receptor 157##AK304154|GPR157|80045|G protein-coupled receptor 157##AY768808|GPR157|80045|G protein-coupled receptor 157##NM_024980|GPR157|80045|G protein-coupled receptor 157##BC018691|GPR157|80045|G protein-coupled receptor 157##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	0.0	
chr5	51256794	51256929	reg1040038.p1	4.882	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	-577608	+	BC031213 NM_002202	-577904	+	TSC_hg19_v1_chr5_+_49962920 AB463183 AM393004	-1293934	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	827128	+	AK025729 BC007650 TSC_hg19_v1_chr5_+_52095991 BC005889 BC007249 AF132951 AK312633 AF139828 BC022789	839125	+	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	1028259	+	AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##BC031213|ISL1|3670|ISL LIM homeobox 1##NM_002202|ISL1|3670|ISL LIM homeobox 1##AM393004|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1##AK025729|PELO|53918|pelota homolog (Drosophila)##BC007650|PELO|53918|pelota homolog (Drosophila)##BC005889|PELO|53918|pelota homolog (Drosophila)##BC007249|PELO|53918|pelota homolog (Drosophila)##AF132951|PELO|53918|pelota homolog (Drosophila)##AK312633|PELO|53918|pelota homolog (Drosophila)##AF139828|PELO|53918|pelota homolog (Drosophila)##BC022789|PELO|53918|pelota homolog (Drosophila)##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)	0.754348	CTCF.p2:11:0.754
chr6	355864	356045	reg1027637.p1	4.882	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-63457	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-63869	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	35810	+	AF508547 BC101697 BC101699 NM_148959	300999	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	337136	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chr20	56767940	56768019	reg1005587.p2	4.881	+	NM_178456 BC035405	-41992	+	NM_199171	-481439	-	TSC_hg19_v1_chr20_-_56285634 BC080635 AF224278 AY128643 NM_199169 NM_199170 AX775887 AK296199	-482357	-	AK299330 AK057583 BC100979 BC100980 TSC_hg19_v1_chr20_-_56884511	116520	-	TSC_hg19_v1_chr20_+_56884770 NM_020673 BC063457 AF091034 AJ276210	116803	+	TSC_hg19_v1_chr20_+_56884847 BC015710	116865	+	NM_178456|C20orf85|128602|chromosome 20 open reading frame 85##BC035405|C20orf85|128602|chromosome 20 open reading frame 85##NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##BC080635|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AF224278|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AY128643|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199169|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199170|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK296199|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK299330|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##AK057583|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100979|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100980|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##NM_020673|RAB22A|57403|RAB22A, member RAS oncogene family##BC063457|RAB22A|57403|RAB22A, member RAS oncogene family##AF091034|RAB22A|57403|RAB22A, member RAS oncogene family##AJ276210|RAB22A|57403|RAB22A, member RAS oncogene family##BC015710|RAB22A|57403|RAB22A, member RAS oncogene family	0.0	
chr4	38130534	38130714	reg1024747.p1	4.881	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-151607	+	AF095288 BC069114 BC069400 NM_006607	-168569	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-237835	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	535202	+	AF289565 TSC_hg19_v1_chr4_-_38666549	535865	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	653975	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr5	77040080	77040166	reg1036243.p1	4.881	+	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	-105609	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	-105694	-	TSC_hg19_v1_chr5_-_76788333 AK001766 BC001807 NM_018268	-251808	-	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	32009	-	BC113045 CU691576 DQ894915 EU176289 TSC_hg19_v1_chr5_-_77590458 AK225908 U91931	550302	-	TSC_hg19_v1_chr5_-_77590488 AY623424 AK303300	550354	-	BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##EU446696|OTP|23440|orthopedia homeobox##AK001766|WDR41|55255|WD repeat domain 41##BC001807|WDR41|55255|WD repeat domain 41##NM_018268|WDR41|55255|WD repeat domain 41##BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A##DQ894915|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##EU176289|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK225908|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U91931|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AY623424|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK303300|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit	0.97486	CTCF.p2:17:0.975
chr7	142490919	142491099	reg1000763.p1	4.881	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	-33683	+	NM_001190487	-116879	+	AY358487 BC035384 AK122940 NM_001001317	-533148	-	M12426 TSC_hg19_v1_chr7_+_142495248	4186	+	TSC_hg19_v1_chr7_+_142552837 NM_004445 D83492 BC015495 BC051028 BC056159	61716	+	TSC_hg19_v1_chr7_+_142560518 BC110606 BC110607	69506	+	NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##NM_004445|EPHB6|2051|EPH receptor B6##D83492|EPHB6|2051|EPH receptor B6##BC015495|EPHB6|2051|EPH receptor B6##BC051028|EPHB6|2051|EPH receptor B6##BC056159|EPHB6|2051|EPH receptor B6##BC110606|EPHB6|2051|EPH receptor B6##BC110607|EPHB6|2051|EPH receptor B6	0.066926	
chrX	9961399	9961516	reg1028991.p2	4.881	+	NM_001195081	-26060	+	BC140866 TSC_hg19_v1_chrX_+_9754543	-206914	+	TSC_hg19_v1_chrX_+_9754468 NM_001649 X83543	-206977	+	BC098455 NM_015691	22336	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	163597	+	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	574102	-	NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##BC140866|SHROOM2|357|shroom family member 2##NM_001649|SHROOM2|357|shroom family member 2##X83543|SHROOM2|357|shroom family member 2##BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)	0.323879	CTCF.p2:-14:0.324
chr14	69041294	69041361	reg1041660.p1	4.880	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-754807	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-758028	-	AK315462 NM_152443	-872725	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	218393	-	NM_001244698 NM_004926	219303	-	NM_001244701 AB528867	221657	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr16	25077324	25077474	reg1034625.p1	4.880	+	TSC_hg19_v1_chr16_-_25026691 AK027567 AK291691 BC080195 AK301500 NM_001006634 NM_018054	-50707	-	AJ306731 AJ306732 TSC_hg19_v1_chr16_-_25026604	-50787	-	AK125358 TSC_hg19_v1_chr16_-_24968918	-108507	-	TSC_hg19_v1_chr16_+_25078227 BC023651 AK093382	890	+	TSC_hg19_v1_chr16_+_25123062 NM_001032391 NM_016309 AK223364 AF151826 BC001214	45662	+	TSC_hg19_v1_chr16_+_25123102 AK025884 AK225271 AK291885 AK314409 BC014217 AF037601 CU674610 AL137283 CU676933	45798	+	AK027567|ARHGAP17|55114|Rho GTPase activating protein 17##AK291691|ARHGAP17|55114|Rho GTPase activating protein 17##BC080195|ARHGAP17|55114|Rho GTPase activating protein 17##AK301500|ARHGAP17|55114|Rho GTPase activating protein 17##NM_001006634|ARHGAP17|55114|Rho GTPase activating protein 17##NM_018054|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306731|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306732|ARHGAP17|55114|Rho GTPase activating protein 17##AK125358|ARHGAP17|55114|Rho GTPase activating protein 17##BC023651|LOC283887|283887|uncharacterized LOC283887##AK093382|LOC283887|283887|uncharacterized LOC283887##NM_001032391|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_016309|LCMT1|51451|leucine carboxyl methyltransferase 1##AK223364|LCMT1|51451|leucine carboxyl methyltransferase 1##AF151826|LCMT1|51451|leucine carboxyl methyltransferase 1##BC001214|LCMT1|51451|leucine carboxyl methyltransferase 1##AK025884|LCMT1|51451|leucine carboxyl methyltransferase 1##AK225271|LCMT1|51451|leucine carboxyl methyltransferase 1##AK291885|LCMT1|51451|leucine carboxyl methyltransferase 1##AK314409|LCMT1|51451|leucine carboxyl methyltransferase 1##BC014217|LCMT1|51451|leucine carboxyl methyltransferase 1##AF037601|LCMT1|51451|leucine carboxyl methyltransferase 1##AL137283|LCMT1|51451|leucine carboxyl methyltransferase 1	0.96561	CTCF.p2:-2:0.966
chr17	40856958	40857052	reg1025050.p1	4.880	+	TSC_hg19_v1_chr17_+_40834578 NM_003632 U87223 BC171797 AB384696	-22297	+	AF208237 AY429103 EU832758 GQ129298 AF215981 BC098132 BC098157 BC098304 BC099840 NM_016602	-23163	-	TSC_hg19_v1_chr17_-_40829013 BC016062 AK024672 AB208939 BC052978 NM_024927	-28192	-	TSC_hg19_v1_chr17_-_40897056 BC015882 AK299887 AK295853 AK304835 AK309121 AK310399 AK311237 AL833159 AK295626 NM_001991	40073	-	BC034924 TSC_hg19_v1_chr17_-_40913104 BC001607 BC041021	56069	-	AK057121 TSC_hg19_v1_chr17_-_40913137	56132	-	NM_003632|CNTNAP1|8506|contactin associated protein 1##U87223|CNTNAP1|8506|contactin associated protein 1##BC171797|CNTNAP1|8506|contactin associated protein 1##AF208237|CCR10|2826|chemokine (C-C motif) receptor 10##AY429103|CCR10|2826|chemokine (C-C motif) receptor 10##EU832758|CCR10|2826|chemokine (C-C motif) receptor 10##GQ129298|CCR10|2826|chemokine (C-C motif) receptor 10##AF215981|CCR10|2826|chemokine (C-C motif) receptor 10##BC098132|CCR10|2826|chemokine (C-C motif) receptor 10##BC098157|CCR10|2826|chemokine (C-C motif) receptor 10##BC098304|CCR10|2826|chemokine (C-C motif) receptor 10##BC099840|CCR10|2826|chemokine (C-C motif) receptor 10##NM_016602|CCR10|2826|chemokine (C-C motif) receptor 10##BC016062|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AK024672|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AB208939|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##BC052978|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##NM_024927|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##BC015882|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK299887|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK295853|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK304835|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK309121|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK310399|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK311237|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AL833159|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK295626|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##NM_001991|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##BC034924|LOC100190938|100190938|uncharacterized LOC100190938##BC001607|LOC100190938|100190938|uncharacterized LOC100190938##BC041021|LOC100190938|100190938|uncharacterized LOC100190938##AK057121|LOC100190938|100190938|uncharacterized LOC100190938	0.0	
chr4	185458534	185458700	reg1006411.p3	4.880	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	-62936	-	BC035035 AY358676 AK057370 NM_153343	-319552	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-630706	+	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	111984	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	112216	+	TSC_hg19_v1_chr4_+_185570923 BC064600 AK307317	112312	+	X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111##BC064600|CCDC111|201973|coiled-coil domain containing 111##AK307317|CCDC111|201973|coiled-coil domain containing 111	0.0	
chrX	44103400	44103508	reg1029363.p2	4.880	+	NM_000266	-270534	-	AK294306 M69177 TSC_hg19_v1_chrX_-_43741666 BC022494 AK310458 AK312679 NM_000898	-361787	-	TSC_hg19_v1_chrX_-_43741500 S62734 CU692654 GQ129432 GQ129433	-361931	-	CU689086 AK292967 AK026496 AK297714 BC031039 NM_025184 AK291187	99494	-	TSC_hg19_v1_chrX_-_44402101 BC035015 BC042813 NM_173794	298700	-	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	599859	+	NM_000266|NDP|4693|Norrie disease (pseudoglioma)##AK294306|MAOB|4129|monoamine oxidase B##M69177|MAOB|4129|monoamine oxidase B##BC022494|MAOB|4129|monoamine oxidase B##AK310458|MAOB|4129|monoamine oxidase B##AK312679|MAOB|4129|monoamine oxidase B##NM_000898|MAOB|4129|monoamine oxidase B##S62734|MAOB|4129|monoamine oxidase B##GQ129432|MAOB|4129|monoamine oxidase B##GQ129433|MAOB|4129|monoamine oxidase B##AK292967|EFHC2|80258|EF-hand domain (C-terminal) containing 2##AK026496|EFHC2|80258|EF-hand domain (C-terminal) containing 2##AK297714|EFHC2|80258|EF-hand domain (C-terminal) containing 2##BC031039|EFHC2|80258|EF-hand domain (C-terminal) containing 2##NM_025184|EFHC2|80258|EF-hand domain (C-terminal) containing 2##AK291187|EFHC2|80258|EF-hand domain (C-terminal) containing 2##BC035015|FUNDC1|139341|FUN14 domain containing 1##BC042813|FUNDC1|139341|FUN14 domain containing 1##NM_173794|FUNDC1|139341|FUN14 domain containing 1##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21	0.97848	CTCF.p2:2:0.978
chr13	91814562	91814663	reg1028270.p1	4.879	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3489743	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5441173	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7358112	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	236292	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	2064815	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3317214	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.981384	CTCF.p2:7:0.981
chr2	190888704	190888813	reg1026929.p1	4.879	+	BC036376 TSC_hg19_v1_chr2_+_190649225 BC008410 AK295602 AK308311 BC084548 AY540751 AK297440 BC096330 BC096331 BC096332 AK316215 AK304634	-239558	+	TSC_hg19_v1_chr2_-_190649075 AK074756 NM_001128150 NM_016467	-239660	-	TSC_hg19_v1_chr2_-_190649062 AF151036 AF395704 AK313533 BC005200	-239724	-	AF019627 AB527883 EU446953 BC074757 AK291524 AF104922 NM_005259	38629	-	NM_001042521	113727	+	NM_001042520	126213	+	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AF151036|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AF395704|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AK313533|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##BC005200|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AF019627|MSTN|2660|myostatin##EU446953|MSTN|2660|myostatin##BC074757|MSTN|2660|myostatin##AK291524|MSTN|2660|myostatin##AF104922|MSTN|2660|myostatin##NM_005259|MSTN|2660|myostatin##NM_001042521|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88	0.997586	CTCF.p2:17:0.998
chr7	12714634	12714740	reg1026898.p1	4.879	+	AK027778 NM_033128	-85540	+	AB067492 NM_001112706 AK290363 AK075123 TSC_hg19_v1_chr7_+_12610346 BC021090 AB590413 DQ892033 DQ895224 AF276507	-104380	+	NM_001135924	-270836	-	TSC_hg19_v1_chr7_+_12726499 NM_001037164 NM_212460 BC039123 BC001111 BC003027	11799	+	NM_001195396 NM_005738	12223	+	TSC_hg19_v1_chr7_+_12727257 AK313233 U73960	12559	+	AK027778|SCIN|85477|scinderin##NM_033128|SCIN|85477|scinderin##AB067492|SCIN|85477|scinderin##NM_001112706|SCIN|85477|scinderin##AK290363|SCIN|85477|scinderin##AK075123|SCIN|85477|scinderin##BC021090|SCIN|85477|scinderin##DQ892033|SCIN|85477|scinderin##DQ895224|SCIN|85477|scinderin##AF276507|SCIN|85477|scinderin##NM_001135924|VWDE|221806|von Willebrand factor D and EGF domains##NM_001037164|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_212460|ARL4A|10124|ADP-ribosylation factor-like 4A##BC039123|ARL4A|10124|ADP-ribosylation factor-like 4A##BC001111|ARL4A|10124|ADP-ribosylation factor-like 4A##BC003027|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_001195396|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_005738|ARL4A|10124|ADP-ribosylation factor-like 4A##AK313233|ARL4A|10124|ADP-ribosylation factor-like 4A##U73960|ARL4A|10124|ADP-ribosylation factor-like 4A	0.08035	
chr7	74039817	74039960	reg1027070.p1	4.879	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	-171453	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	-171580	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	-171724	+	AK292832 TSC_hg19_v1_chr7_+_74072028 AF015553 NM_001163636 NM_001518 NM_032999 NM_033000 NM_033001	32133	+	TSC_hg19_v1_chr7_+_74072046 BC070484	32156	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	32234	+	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AK292832|GTF2I|2969|general transcription factor IIi##AF015553|GTF2I|2969|general transcription factor IIi##NM_001163636|GTF2I|2969|general transcription factor IIi##NM_001518|GTF2I|2969|general transcription factor IIi##NM_032999|GTF2I|2969|general transcription factor IIi##NM_033000|GTF2I|2969|general transcription factor IIi##NM_033001|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi	0.491865	CTCF.p2:29:0.492
chr15	23571630	23571742	reg1033530.p1	4.878	+	TSC_hg19_v1_chr15_-_23378229 AF041081 AF041080	-193442	-	TSC_hg19_v1_chr15_-_23378205 AK308640	-193496	-	DQ309040 BC048987 TSC_hg19_v1_chr15_-_23208467	-363275	-	NM_005664	238767	+	AK309383 TSC_hg19_v1_chr15_+_23810820 BC044639 BC013970 BC070293 EU446987 CU692226	239182	+	NM_019066 TSC_hg19_v1_chr15_-_23893004	321318	-	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041080|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AK308640|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##DQ309040|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC048987|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##NM_005664|MKRN3|7681|makorin ring finger protein 3##BC044639|MKRN3|7681|makorin ring finger protein 3##BC070293|MKRN3|7681|makorin ring finger protein 3##EU446987|MKRN3|7681|makorin ring finger protein 3##NM_019066|MAGEL2|54551|MAGE-like 2	0.79594	CTCF.p2:7:0.796
chr15	75339949	75340129	reg1013931.p2	4.878	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-24058	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-24111	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-52132	+	AK128205 TSC_hg19_v1_chr15_+_75491259	151207	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	154173	+	BC110367 TSC_hg19_v1_chr15_+_75494233	154194	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chr20	3800910	3800977	reg1024178.p2	4.878	+	TSC_hg19_v1_chr20_+_3776956 S78187 Z68092 BC006395 M81934	-23938	+	AK092713 FR695900 FR695901 NM_004358 NM_021872 NM_021873 TSC_hg19_v1_chr20_+_3776429 BX647988 BC051711	-24510	+	TSC_hg19_v1_chr20_-_3767358 X05299 AB464478 AF002713 BC053847 NM_001810	-33808	-	TSC_hg19_v1_chr20_+_3801202 NM_001204446 NM_001204447 NM_018347 BC011985 AK002030 AK093332 BC043344	255	+	TSC_hg19_v1_chr20_+_3827524 NM_001206491 NM_020746 AK296897 AB097003 AK123956 AK291785 BX649084 AK023799 AX775775 BC044952 AK130992	26553	+	AK021791 NM_024960 TSC_hg19_v1_chr20_+_3869569	68589	+	S78187|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##Z68092|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BC006395|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##M81934|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##AK092713|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##FR695900|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##FR695901|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_004358|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_021872|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_021873|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BX647988|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BC051711|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##X05299|CENPB|1059|centromere protein B, 80kDa##AF002713|CENPB|1059|centromere protein B, 80kDa##BC053847|CENPB|1059|centromere protein B, 80kDa##NM_001810|CENPB|1059|centromere protein B, 80kDa##NM_001204446|C20orf29|55317|chromosome 20 open reading frame 29##NM_001204447|C20orf29|55317|chromosome 20 open reading frame 29##NM_018347|C20orf29|55317|chromosome 20 open reading frame 29##BC011985|C20orf29|55317|chromosome 20 open reading frame 29##AK002030|C20orf29|55317|chromosome 20 open reading frame 29##AK093332|C20orf29|55317|chromosome 20 open reading frame 29##BC043344|C20orf29|55317|chromosome 20 open reading frame 29##NM_001206491|MAVS|57506|mitochondrial antiviral signaling protein##NM_020746|MAVS|57506|mitochondrial antiviral signaling protein##AK296897|MAVS|57506|mitochondrial antiviral signaling protein##AB097003|MAVS|57506|mitochondrial antiviral signaling protein##AK123956|MAVS|57506|mitochondrial antiviral signaling protein##AK291785|MAVS|57506|mitochondrial antiviral signaling protein##BX649084|MAVS|57506|mitochondrial antiviral signaling protein##AK023799|MAVS|57506|mitochondrial antiviral signaling protein##BC044952|MAVS|57506|mitochondrial antiviral signaling protein##AK130992|MAVS|57506|mitochondrial antiviral signaling protein##AK021791|PANK2|80025|pantothenate kinase 2##NM_024960|PANK2|80025|pantothenate kinase 2	0.961554	CTCF.p2:-33:0.962
chr20	55091203	55091295	reg1027475.p1	4.878	+	AK026118 AK293662 TSC_hg19_v1_chr20_+_55043712 BC003359 AF161518 AK225135 BC001536 BC002769	-47521	+	TSC_hg19_v1_chr20_+_55043703 AF117231 AK302029 AF212244 AK000481	-47549	+	TSC_hg19_v1_chr20_+_55043682 AF161513 AK314563	-47565	+	NM_001012971 BC029411 BC105792 BC107704 BC070179	8554	+	AK131203 NM_080615	9731	-	BC014951 NM_001013646	17034	+	AK026118|C20orf43|51507|chromosome 20 open reading frame 43##AK293662|C20orf43|51507|chromosome 20 open reading frame 43##BC003359|C20orf43|51507|chromosome 20 open reading frame 43##AF161518|C20orf43|51507|chromosome 20 open reading frame 43##AK225135|C20orf43|51507|chromosome 20 open reading frame 43##BC001536|C20orf43|51507|chromosome 20 open reading frame 43##BC002769|C20orf43|51507|chromosome 20 open reading frame 43##AF117231|C20orf43|51507|chromosome 20 open reading frame 43##AK302029|C20orf43|51507|chromosome 20 open reading frame 43##AF212244|C20orf43|51507|chromosome 20 open reading frame 43##AK000481|C20orf43|51507|chromosome 20 open reading frame 43##AF161513|C20orf43|51507|chromosome 20 open reading frame 43##AK314563|C20orf43|51507|chromosome 20 open reading frame 43##NM_001012971|FAM209A|200232|family with sequence similarity 209, member A##BC029411|FAM209A|200232|family with sequence similarity 209, member A##BC105792|FAM209B|388799|family with sequence similarity 209, member B##BC107704|FAM209A|200232|family with sequence similarity 209, member A##BC070179|FAM209A|200232|family with sequence similarity 209, member A##AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##BC014951|FAM209B|388799|family with sequence similarity 209, member B##NM_001013646|FAM209B|388799|family with sequence similarity 209, member B	0.851112	CTCF.p2:23:0.851
chr6	47601086	47601203	reg1025240.p1	4.878	+	TSC_hg19_v1_chr6_+_47445937 AF146277 BC069444	-155228	+	TSC_hg19_v1_chr6_+_47445524 NM_012120	-155629	+	TSC_hg19_v1_chr6_-_47277647 NM_014452	-323449	-	AY140953 DQ315369 NM_153839	23129	+	AK095395 NM_153838 DQ315370	65150	+	BC126194 BC126198 NM_181744 AY377391 AY288419 HQ258199	148644	+	AF146277|CD2AP|23607|CD2-associated protein##BC069444|CD2AP|23607|CD2-associated protein##NM_012120|CD2AP|23607|CD2-associated protein##NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AY140953|GPR111|222611|G protein-coupled receptor 111##DQ315369|GPR111|222611|G protein-coupled receptor 111##NM_153839|GPR111|222611|G protein-coupled receptor 111##AK095395|GPR115|221393|G protein-coupled receptor 115##NM_153838|GPR115|221393|G protein-coupled receptor 115##DQ315370|GPR115|221393|G protein-coupled receptor 115##BC126194|OPN5|221391|opsin 5##BC126198|OPN5|221391|opsin 5##NM_181744|OPN5|221391|opsin 5##AY377391|OPN5|221391|opsin 5##AY288419|OPN5|221391|opsin 5##HQ258199|OPN5|221391|opsin 5	0.022784	
chr6	64282019	64282183	reg1030084.p1	4.878	+	TSC_hg19_v1_chr6_+_64281913 BC045571 NM_003463	-185	+	TSC_hg19_v1_chr6_+_64231650 CR749458	-50446	+	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	-252237	-	TSC_hg19_v1_chr6_+_64282432 AK312526	334	+	TSC_hg19_v1_chr6_+_64282463 BC023975	442	+	TSC_hg19_v1_chr6_+_64286554 U48296 AB385532 CU692824 DQ890715 DQ893895 EU831599 EU831686 AB451314 AB451444	4509	+	BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AK312526|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##BC023975|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##U48296|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##DQ890715|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##DQ893895|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##EU831599|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##EU831686|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AB451314|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AB451444|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	0.0	
chr11	64084472	64084582	reg1026587.p1	4.877	+	TSC_hg19_v1_chr11_+_64073040 L38487 NM_004451 BC063795 BC073956	-11459	+	AL117564 NM_001039496 AM392988 AB590987	-16656	+	TSC_hg19_v1_chr11_+_64058772 AK309443 NM_033310 BC067791 AF259500 AK296021	-25696	+	TSC_hg19_v1_chr11_-_64085009 AK312050 DQ892261 DQ895463 BC105294 BC029482 BC017172 AF161501 AF229068 NM_016404	494	-	BC110983 NM_012094 NM_181651 NM_181652 TSC_hg19_v1_chr11_+_64085600 AF197952	1052	+	TSC_hg19_v1_chr11_+_64085676 AF124993 AF110731 BC113723 BC113725 BC143849 BC171733 AF112212 AF242525 AF231705 CR457203 HQ258129 AJ249483	1195	+	L38487|ESRRA|2101|estrogen-related receptor alpha##NM_004451|ESRRA|2101|estrogen-related receptor alpha##BC063795|ESRRA|2101|estrogen-related receptor alpha##BC073956|ESRRA|2101|estrogen-related receptor alpha##AL117564|C11orf20|25858|chromosome 11 open reading frame 20##NM_001039496|C11orf20|25858|chromosome 11 open reading frame 20##AM392988|C11orf20|25858|chromosome 11 open reading frame 20##AK309443|KCNK4|50801|potassium channel, subfamily K, member 4##NM_033310|KCNK4|50801|potassium channel, subfamily K, member 4##BC067791|KCNK4|50801|potassium channel, subfamily K, member 4##AF259500|KCNK4|50801|potassium channel, subfamily K, member 4##AK296021|KCNK4|50801|potassium channel, subfamily K, member 4##AK312050|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ892261|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ895463|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC105294|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC029482|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC017172|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF161501|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF229068|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##NM_016404|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC110983|PRDX5|25824|peroxiredoxin 5##NM_012094|PRDX5|25824|peroxiredoxin 5##NM_181651|PRDX5|25824|peroxiredoxin 5##NM_181652|PRDX5|25824|peroxiredoxin 5##AF197952|PRDX5|25824|peroxiredoxin 5##AF124993|PRDX5|25824|peroxiredoxin 5##AF110731|PRDX5|25824|peroxiredoxin 5##BC113723|PRDX5|25824|peroxiredoxin 5##BC113725|PRDX5|25824|peroxiredoxin 5##BC143849|PRDX5|25824|peroxiredoxin 5##BC171733|PRDX5|25824|peroxiredoxin 5##AF112212|PRDX5|25824|peroxiredoxin 5##AF242525|PRDX5|25824|peroxiredoxin 5##AF231705|PRDX5|25824|peroxiredoxin 5##CR457203|PRDX5|25824|peroxiredoxin 5##HQ258129|PRDX5|25824|peroxiredoxin 5##AJ249483|PRDX5|25824|peroxiredoxin 5	0.343696	CTCF.p2:-85:0.344
chr14	92559803	92559898	reg1025895.p1	4.877	+	BC146845 AF007217 BC002656 BC069008 TSC_hg19_v1_chr14_-_92506382 Y12490 BC142956 AK307489 NM_004239	-53500	-	TSC_hg19_v1_chr14_-_92414010 AY358898 NM_006329	-145826	-	AF112152 AF093118 BX248290 BC022280 TSC_hg19_v1_chr14_-_92413757 AK075147	-146076	-	GQ176641 GQ176830 U64822 GQ176805 AB528462 BC033711 DQ891282 EU176576 TSC_hg19_v1_chr14_-_92572937 AK225884 GQ176809 GQ176452 GQ176644 GQ176714 GQ176825 GQ176836 GQ176550 GQ176806 GQ176835 GQ176810 U64821 AK314919 GQ176433 GQ176434 GQ176435 GQ176436 GQ176437 GQ176438 GQ176439 GQ176440 GQ176441 GQ176442 GQ176443 GQ176444 GQ176445 GQ176446 GQ176447 GQ176448 GQ176450 GQ176451 GQ176453 GQ176454 GQ176455 GQ176456 GQ176457 GQ176458 GQ176459 GQ176460 GQ176461 GQ176462 GQ176463 GQ176464 GQ176465 GQ176466 GQ176467 GQ176468 GQ176469 GQ176470 GQ176471 GQ176472 GQ176473 GQ176474 GQ176475 GQ176476 GQ176477 GQ176478 GQ176479 GQ176480 GQ176481 GQ176482 GQ176483 GQ176484 GQ176485 GQ176486 GQ176487 GQ176488 GQ176489 GQ176491 GQ176492 GQ176493 GQ176494 GQ176495 GQ176496 GQ176497 GQ176498 GQ176499 GQ176500 GQ176501 GQ176502 GQ176503 GQ176504 GQ176505 GQ176506 GQ176507 GQ176508 GQ176509 GQ176510 GQ176511 GQ176512 GQ176513 GQ176514 GQ176515 GQ176516 GQ176517 GQ176518 GQ176519 GQ176520 GQ176521 GQ176522 GQ176523 GQ176524 GQ176525 GQ176526 GQ176527 GQ176528 GQ176529 GQ176530 GQ176531 GQ176532 GQ176533 GQ176534 GQ176535 GQ176536 GQ176537 GQ176538 GQ176539 GQ176542 GQ176543 GQ176544 GQ176545 GQ176546 GQ176547 GQ176548 GQ176549 GQ176551 GQ176552 GQ176553 GQ176554 GQ176555 GQ176556 GQ176557 GQ176558 GQ176559 GQ176560 GQ176561 GQ176562 GQ176563 GQ176564 GQ176565 GQ176566 GQ176567 GQ176568 GQ176569 GQ176570 GQ176571 GQ176572 GQ176573 GQ176574 GQ176575 GQ176576 GQ176577 GQ176578 GQ176579 GQ176580 GQ176581 GQ176582 GQ176583 GQ176584 GQ176585 GQ176586 GQ176587 GQ176588 GQ176589 GQ176590 GQ176591 GQ176592 GQ176593 GQ176594 GQ176595 GQ176596 GQ176597 GQ176598 GQ176599 GQ176600 GQ176601 GQ176602 GQ176603 GQ176604 GQ176605 GQ176607 GQ176608 GQ176609 GQ176610 GQ176611 GQ176612 GQ176613 GQ176614 GQ176616 GQ176617 GQ176619 GQ176620 GQ176621 GQ176622 GQ176623 GQ176624 GQ176625 GQ176626 GQ176627 GQ176628 GQ176630 GQ176631 GQ176632 GQ176633 GQ176635 GQ176637 GQ176638 GQ176639 GQ176640 GQ176642 GQ176643 GQ176645 GQ176646 GQ176647 GQ176648 GQ176649 GQ176650 GQ176653 GQ176654 GQ176657 GQ176658 GQ176661 GQ176662 GQ176663 GQ176664 GQ176665 GQ176666 GQ176667 GQ176668 GQ176670 GQ176671 GQ176673 GQ176674 GQ176675 GQ176676 GQ176677 GQ176678 GQ176679 GQ176680 GQ176681 GQ176682 GQ176683 GQ176684 GQ176685 GQ176686 GQ176687 GQ176688 GQ176689 GQ176690 GQ176691 GQ176692 GQ176693 GQ176694 GQ176695 GQ176696 GQ176697 GQ176698 GQ176699 GQ176700 GQ176701 GQ176702 GQ176703 GQ176704 GQ176705 GQ176706 GQ176707 GQ176708 GQ176709 GQ176710 GQ176711 GQ176712 GQ176713 GQ176715 GQ176716 GQ176717 GQ176718 GQ176719 GQ176720 GQ176721 GQ176722 GQ176723 GQ176724 GQ176725 GQ176726 GQ176727 GQ176728 GQ176729 GQ176730 GQ176731 GQ176732 GQ176733 GQ176735 GQ176736 GQ176737 GQ176738 GQ176739 GQ176740 GQ176741 GQ176742 GQ176743 GQ176744 GQ176745 GQ176746 GQ176747 GQ176748 GQ176749 GQ176750 GQ176751 GQ176752 GQ176753 GQ176754 GQ176755 GQ176756 GQ176757 GQ176758 GQ176759 GQ176760 GQ176761 GQ176762 GQ176763 GQ176764 GQ176765 GQ176766 GQ176767 GQ176768 GQ176769 GQ176770 GQ176771 GQ176772 GQ176773 GQ176774 GQ176775 GQ176776 GQ176777 GQ176778 GQ176779 GQ176780 GQ176781 GQ176782 GQ176783 GQ176784 GQ176785 GQ176786 GQ176787 GQ176788 GQ176789 GQ176790 GQ176791 GQ176792 GQ176793 GQ176794 GQ176795 GQ176796 GQ176797 GQ176798 GQ176799 GQ176800 GQ176801 GQ176802 GQ176803 GQ176804 GQ176807 GQ176811 GQ176812 GQ176813 GQ176814 GQ176815 GQ176816 GQ176817 GQ176818 GQ176819 GQ176820 GQ176821 GQ176822 GQ176823 GQ176824 GQ176826 GQ176827 GQ176828 GQ176829 GQ176831 GQ176832 GQ176833 GQ176834 GQ176837 GQ176838 GQ176839 GQ176840 GQ176841 GQ176842 GQ176843 GQ176844 GQ176845 GQ176846 GQ176847 BC095402 AK307720 S75313 BC022245	13068	-	TSC_hg19_v1_chr14_-_92572957 AB050194 U64820 NM_001127696 NM_001127697 NM_001164774 NM_001164776 NM_001164777 NM_001164778 NM_001164779 NM_001164780 NM_001164781 NM_001164782 NM_004993 NM_030660	13128	-	TSC_hg19_v1_chr14_-_92588038 AF054181 AF050638 BC009691	28161	-	BC146845|TRIP11|9321|thyroid hormone receptor interactor 11##AF007217|TRIP11|9321|thyroid hormone receptor interactor 11##BC002656|TRIP11|9321|thyroid hormone receptor interactor 11##BC069008|TRIP11|9321|thyroid hormone receptor interactor 11##Y12490|TRIP11|9321|thyroid hormone receptor interactor 11##AK307489|TRIP11|9321|thyroid hormone receptor interactor 11##NM_004239|TRIP11|9321|thyroid hormone receptor interactor 11##AY358898|FBLN5|10516|fibulin 5##NM_006329|FBLN5|10516|fibulin 5##AF112152|FBLN5|10516|fibulin 5##AF093118|FBLN5|10516|fibulin 5##BX248290|FBLN5|10516|fibulin 5##BC022280|FBLN5|10516|fibulin 5##AK075147|FBLN5|10516|fibulin 5##U64822|ATXN3|4287|ataxin 3##GQ176805|ATXN3|4287|ataxin 3##BC033711|ATXN3|4287|ataxin 3##DQ891282|ATXN3|4287|ataxin 3##EU176576|ATXN3|4287|ataxin 3##AK225884|ATXN3|4287|ataxin 3##GQ176809|ATXN3|4287|ataxin 3##GQ176452|ATXN3|4287|ataxin 3##GQ176644|ATXN3|4287|ataxin 3##GQ176714|ATXN3|4287|ataxin 3##GQ176836|ATXN3|4287|ataxin 3##GQ176550|ATXN3|4287|ataxin 3##GQ176835|ATXN3|4287|ataxin 3##GQ176810|ATXN3|4287|ataxin 3##U64821|ATXN3|4287|ataxin 3##AK314919|ATXN3|4287|ataxin 3##GQ176435|ATXN3|4287|ataxin 3##GQ176436|ATXN3|4287|ataxin 3##GQ176437|ATXN3|4287|ataxin 3##GQ176438|ATXN3|4287|ataxin 3##GQ176443|ATXN3|4287|ataxin 3##GQ176445|ATXN3|4287|ataxin 3##GQ176446|ATXN3|4287|ataxin 3##GQ176453|ATXN3|4287|ataxin 3##GQ176454|ATXN3|4287|ataxin 3##GQ176455|ATXN3|4287|ataxin 3##GQ176456|ATXN3|4287|ataxin 3##GQ176457|ATXN3|4287|ataxin 3##GQ176459|ATXN3|4287|ataxin 3##GQ176461|ATXN3|4287|ataxin 3##GQ176462|ATXN3|4287|ataxin 3##GQ176463|ATXN3|4287|ataxin 3##GQ176464|ATXN3|4287|ataxin 3##GQ176465|ATXN3|4287|ataxin 3##GQ176466|ATXN3|4287|ataxin 3##GQ176467|ATXN3|4287|ataxin 3##GQ176469|ATXN3|4287|ataxin 3##GQ176474|ATXN3|4287|ataxin 3##GQ176475|ATXN3|4287|ataxin 3##GQ176476|ATXN3|4287|ataxin 3##GQ176477|ATXN3|4287|ataxin 3##GQ176479|ATXN3|4287|ataxin 3##GQ176480|ATXN3|4287|ataxin 3##GQ176482|ATXN3|4287|ataxin 3##GQ176483|ATXN3|4287|ataxin 3##GQ176484|ATXN3|4287|ataxin 3##GQ176485|ATXN3|4287|ataxin 3##GQ176486|ATXN3|4287|ataxin 3##GQ176487|ATXN3|4287|ataxin 3##GQ176488|ATXN3|4287|ataxin 3##GQ176489|ATXN3|4287|ataxin 3##GQ176492|ATXN3|4287|ataxin 3##GQ176493|ATXN3|4287|ataxin 3##GQ176494|ATXN3|4287|ataxin 3##GQ176496|ATXN3|4287|ataxin 3##GQ176497|ATXN3|4287|ataxin 3##GQ176499|ATXN3|4287|ataxin 3##GQ176510|ATXN3|4287|ataxin 3##GQ176511|ATXN3|4287|ataxin 3##GQ176525|ATXN3|4287|ataxin 3##GQ176529|ATXN3|4287|ataxin 3##GQ176531|ATXN3|4287|ataxin 3##GQ176532|ATXN3|4287|ataxin 3##GQ176533|ATXN3|4287|ataxin 3##GQ176534|ATXN3|4287|ataxin 3##GQ176536|ATXN3|4287|ataxin 3##GQ176538|ATXN3|4287|ataxin 3##GQ176542|ATXN3|4287|ataxin 3##GQ176543|ATXN3|4287|ataxin 3##GQ176545|ATXN3|4287|ataxin 3##GQ176546|ATXN3|4287|ataxin 3##GQ176547|ATXN3|4287|ataxin 3##GQ176548|ATXN3|4287|ataxin 3##GQ176551|ATXN3|4287|ataxin 3##GQ176552|ATXN3|4287|ataxin 3##GQ176554|ATXN3|4287|ataxin 3##GQ176556|ATXN3|4287|ataxin 3##GQ176559|ATXN3|4287|ataxin 3##GQ176560|ATXN3|4287|ataxin 3##GQ176563|ATXN3|4287|ataxin 3##GQ176565|ATXN3|4287|ataxin 3##GQ176566|ATXN3|4287|ataxin 3##GQ176567|ATXN3|4287|ataxin 3##GQ176570|ATXN3|4287|ataxin 3##GQ176574|ATXN3|4287|ataxin 3##GQ176576|ATXN3|4287|ataxin 3##GQ176577|ATXN3|4287|ataxin 3##GQ176578|ATXN3|4287|ataxin 3##GQ176579|ATXN3|4287|ataxin 3##GQ176580|ATXN3|4287|ataxin 3##GQ176582|ATXN3|4287|ataxin 3##GQ176587|ATXN3|4287|ataxin 3##GQ176589|ATXN3|4287|ataxin 3##GQ176592|ATXN3|4287|ataxin 3##GQ176609|ATXN3|4287|ataxin 3##GQ176616|ATXN3|4287|ataxin 3##GQ176621|ATXN3|4287|ataxin 3##GQ176622|ATXN3|4287|ataxin 3##GQ176624|ATXN3|4287|ataxin 3##GQ176626|ATXN3|4287|ataxin 3##GQ176627|ATXN3|4287|ataxin 3##GQ176628|ATXN3|4287|ataxin 3##GQ176630|ATXN3|4287|ataxin 3##GQ176631|ATXN3|4287|ataxin 3##GQ176632|ATXN3|4287|ataxin 3##GQ176633|ATXN3|4287|ataxin 3##GQ176639|ATXN3|4287|ataxin 3##GQ176658|ATXN3|4287|ataxin 3##GQ176662|ATXN3|4287|ataxin 3##GQ176664|ATXN3|4287|ataxin 3##GQ176665|ATXN3|4287|ataxin 3##GQ176667|ATXN3|4287|ataxin 3##GQ176674|ATXN3|4287|ataxin 3##GQ176675|ATXN3|4287|ataxin 3##GQ176677|ATXN3|4287|ataxin 3##GQ176678|ATXN3|4287|ataxin 3##GQ176679|ATXN3|4287|ataxin 3##GQ176680|ATXN3|4287|ataxin 3##GQ176681|ATXN3|4287|ataxin 3##GQ176682|ATXN3|4287|ataxin 3##GQ176683|ATXN3|4287|ataxin 3##GQ176684|ATXN3|4287|ataxin 3##GQ176685|ATXN3|4287|ataxin 3##GQ176687|ATXN3|4287|ataxin 3##GQ176688|ATXN3|4287|ataxin 3##GQ176689|ATXN3|4287|ataxin 3##GQ176690|ATXN3|4287|ataxin 3##GQ176691|ATXN3|4287|ataxin 3##GQ176692|ATXN3|4287|ataxin 3##GQ176693|ATXN3|4287|ataxin 3##GQ176694|ATXN3|4287|ataxin 3##GQ176695|ATXN3|4287|ataxin 3##GQ176696|ATXN3|4287|ataxin 3##GQ176697|ATXN3|4287|ataxin 3##GQ176700|ATXN3|4287|ataxin 3##GQ176701|ATXN3|4287|ataxin 3##GQ176702|ATXN3|4287|ataxin 3##GQ176703|ATXN3|4287|ataxin 3##GQ176712|ATXN3|4287|ataxin 3##GQ176715|ATXN3|4287|ataxin 3##GQ176716|ATXN3|4287|ataxin 3##GQ176718|ATXN3|4287|ataxin 3##GQ176719|ATXN3|4287|ataxin 3##GQ176720|ATXN3|4287|ataxin 3##GQ176721|ATXN3|4287|ataxin 3##GQ176722|ATXN3|4287|ataxin 3##GQ176723|ATXN3|4287|ataxin 3##GQ176724|ATXN3|4287|ataxin 3##GQ176725|ATXN3|4287|ataxin 3##GQ176726|ATXN3|4287|ataxin 3##GQ176727|ATXN3|4287|ataxin 3##GQ176728|ATXN3|4287|ataxin 3##GQ176737|ATXN3|4287|ataxin 3##GQ176740|ATXN3|4287|ataxin 3##GQ176741|ATXN3|4287|ataxin 3##GQ176743|ATXN3|4287|ataxin 3##GQ176744|ATXN3|4287|ataxin 3##GQ176746|ATXN3|4287|ataxin 3##GQ176748|ATXN3|4287|ataxin 3##GQ176749|ATXN3|4287|ataxin 3##GQ176750|ATXN3|4287|ataxin 3##GQ176753|ATXN3|4287|ataxin 3##GQ176754|ATXN3|4287|ataxin 3##GQ176755|ATXN3|4287|ataxin 3##GQ176756|ATXN3|4287|ataxin 3##GQ176757|ATXN3|4287|ataxin 3##GQ176758|ATXN3|4287|ataxin 3##GQ176759|ATXN3|4287|ataxin 3##GQ176760|ATXN3|4287|ataxin 3##GQ176761|ATXN3|4287|ataxin 3##GQ176763|ATXN3|4287|ataxin 3##GQ176766|ATXN3|4287|ataxin 3##GQ176767|ATXN3|4287|ataxin 3##GQ176769|ATXN3|4287|ataxin 3##GQ176770|ATXN3|4287|ataxin 3##GQ176771|ATXN3|4287|ataxin 3##GQ176772|ATXN3|4287|ataxin 3##GQ176773|ATXN3|4287|ataxin 3##GQ176774|ATXN3|4287|ataxin 3##GQ176776|ATXN3|4287|ataxin 3##GQ176777|ATXN8|724066|ataxin 8##GQ176778|ATXN3|4287|ataxin 3##GQ176779|ATXN3|4287|ataxin 3##GQ176780|ATXN3|4287|ataxin 3##GQ176781|ATXN3|4287|ataxin 3##GQ176782|ATXN3|4287|ataxin 3##GQ176784|ATXN3|4287|ataxin 3##GQ176785|ATXN3|4287|ataxin 3##GQ176786|ATXN3|4287|ataxin 3##GQ176787|ATXN3|4287|ataxin 3##GQ176789|ATXN3|4287|ataxin 3##GQ176790|ATXN3|4287|ataxin 3##GQ176793|ATXN3|4287|ataxin 3##GQ176807|ATXN3|4287|ataxin 3##GQ176811|ATXN3|4287|ataxin 3##GQ176812|ATXN3|4287|ataxin 3##GQ176813|ATXN3|4287|ataxin 3##GQ176814|ATXN3|4287|ataxin 3##GQ176815|ATXN3|4287|ataxin 3##GQ176817|ATXN3|4287|ataxin 3##GQ176818|ATXN3|4287|ataxin 3##GQ176819|ATXN3|4287|ataxin 3##GQ176820|ATXN3|4287|ataxin 3##GQ176821|ATXN3|4287|ataxin 3##GQ176823|ATXN3|4287|ataxin 3##GQ176828|ATXN3|4287|ataxin 3##GQ176832|ATXN3|4287|ataxin 3##GQ176833|ATXN3|4287|ataxin 3##GQ176837|ATXN3|4287|ataxin 3##BC095402|ATXN3|4287|ataxin 3##AK307720|ATXN3|4287|ataxin 3##S75313|ATXN3|4287|ataxin 3##BC022245|ATXN3|4287|ataxin 3##AB050194|ATXN3|4287|ataxin 3##U64820|ATXN3|4287|ataxin 3##NM_001127696|ATXN3|4287|ataxin 3##NM_001127697|ATXN3|4287|ataxin 3##NM_001164774|ATXN3|4287|ataxin 3##NM_001164776|ATXN3|4287|ataxin 3##NM_001164777|ATXN3|4287|ataxin 3##NM_001164778|ATXN3|4287|ataxin 3##NM_001164779|ATXN3|4287|ataxin 3##NM_001164780|ATXN3|4287|ataxin 3##NM_001164781|ATXN3|4287|ataxin 3##NM_001164782|ATXN3|4287|ataxin 3##NM_004993|ATXN3|4287|ataxin 3##NM_030660|ATXN3|4287|ataxin 3##AF050638|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##BC009691|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa	0.150397	
chr17	64286352	64286476	reg1027870.p1	4.877	+	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	-60889	-	BC131805 TSC_hg19_v1_chr17_-_64188195 BC037991 NM_145036 AK299075 AK096929 NM_001199165	-98233	-	BC029524 NM_001037325	-463754	-	TSC_hg19_v1_chr17_+_64298733 BC053321	12336	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	12513	+	AK290171 TSC_hg19_v1_chr17_+_64831234	544821	+	DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC131805|CEP112|201134|centrosomal protein 112kDa##BC037991|CEP112|201134|centrosomal protein 112kDa##NM_145036|CEP112|201134|centrosomal protein 112kDa##AK299075|CEP112|201134|centrosomal protein 112kDa##AK096929|CEP112|201134|centrosomal protein 112kDa##NM_001199165|CEP112|201134|centrosomal protein 112kDa##BC029524|CEP112|201134|centrosomal protein 112kDa##NM_001037325|CEP112|201134|centrosomal protein 112kDa##BC053321|PRKCA|5578|protein kinase C, alpha##NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5	0.0	
chr18	34152156	34152292	reg1011893.p1	4.877	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	-274510	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-384748	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-442336	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	256539	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	256670	-	AB073382 TSC_hg19_v1_chr18_-_34408948	256728	-	AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.0	
chr18	6249216	6249336	reg1029203.p3	4.877	+	NM_001080209	-357174	-	TSC_hg19_v1_chr18_-_5630663 BC008377	-618629	-	AF069072 AB023204 NM_012307 TSC_hg19_v1_chr18_-_5543997 AK128531	-705288	-	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	165639	-	NM_001243517	262138	+	NM_001010000 BX648684 AK308259 AK302026	585189	+	NM_001080209|TMEM200C|645369|transmembrane protein 200C##BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AF069072|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AB023204|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_012307|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AK128531|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28	0.0	
chr21	43831778	43831861	reg1027249.p1	4.877	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-7807	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-15658	-	M12075 BC032811 NM_003225 X00474 X52003	-45197	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	84561	-	AJ269529 NM_018964	87922	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	102184	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.0	
chr3	23801940	23802039	reg1023792.p1	4.877	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	-557234	+	TSC_hg19_v1_chr3_+_23244600 AK307075	-557406	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-1387855	-	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	45421	+	AK314854 TSC_hg19_v1_chr3_+_23847474	45485	+	AK295354 NM_001202476	49944	+	AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK310298|ZNF385D|79750|zinc finger protein 385D##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##AK314854|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_001202476|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.167806	
chr10	8486740	8486843	reg1028174.p1	4.876	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-389308	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-390016	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-390142	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	2560466	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	2560494	+	AK299548 TSC_hg19_v1_chr10_+_11047339	2560549	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.0	
chr1	213141241	213141401	reg1030572.p1	4.876	+	AK302675 TSC_hg19_v1_chr1_+_213124038	-17298	+	TSC_hg19_v1_chr1_+_213123945 AK290973 NM_001136474 NM_001136475 NM_024749 AK022567 AK096605 BC053836 BC051856 BC028194	-17404	+	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	-109641	+	TSC_hg19_v1_chr1_-_213188830 AK299208	47490	-	TSC_hg19_v1_chr1_-_213189125 AK294479 AK311276 AK299365 BC047469 AK295116 AF510741 AL079275 NM_144567	47806	-	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	83266	+	AK302675|VASH2|79805|vasohibin 2##AK290973|VASH2|79805|vasohibin 2##NM_001136474|VASH2|79805|vasohibin 2##NM_001136475|VASH2|79805|vasohibin 2##NM_024749|VASH2|79805|vasohibin 2##AK022567|VASH2|79805|vasohibin 2##AK096605|VASH2|79805|vasohibin 2##BC053836|VASH2|79805|vasohibin 2##BC051856|VASH2|79805|vasohibin 2##BC028194|VASH2|79805|vasohibin 2##AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK299208|ANGEL2|90806|angel homolog 2 (Drosophila)##AK294479|ANGEL2|90806|angel homolog 2 (Drosophila)##AK311276|ANGEL2|90806|angel homolog 2 (Drosophila)##AK299365|ANGEL2|90806|angel homolog 2 (Drosophila)##BC047469|ANGEL2|90806|angel homolog 2 (Drosophila)##AK295116|ANGEL2|90806|angel homolog 2 (Drosophila)##AF510741|ANGEL2|90806|angel homolog 2 (Drosophila)##AL079275|ANGEL2|90806|angel homolog 2 (Drosophila)##NM_144567|ANGEL2|90806|angel homolog 2 (Drosophila)##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1	0.0	
chr6	55141718	55141825	reg1026964.p1	4.876	+	NM_001526 AK314279	-102677	+	AK055204 NM_001010872 BC101628 BC112275	-430183	+	BC070278 NM_014464 AK312918 BC056235 AB022277 AF195116 AF195117 CU687080 CU691132 EU832329 EU832414	-968496	+	AY358198 NM_207410	50495	+	CU692876 AL137605 AK293856 BC024194 AK055075 AK297191 AK294210 AK127587 NM_001042406 NM_019036	302161	-	TSC_hg19_v1_chr6_-_55740358 M60314 BC027958 NM_021073	598595	-	NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2##AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2##AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B##BC070278|TINAG|27283|tubulointerstitial nephritis antigen##NM_014464|TINAG|27283|tubulointerstitial nephritis antigen##AK312918|TINAG|27283|tubulointerstitial nephritis antigen##BC056235|TINAG|27283|tubulointerstitial nephritis antigen##AB022277|TINAG|27283|tubulointerstitial nephritis antigen##AF195116|TINAG|27283|tubulointerstitial nephritis antigen##AF195117|TINAG|27283|tubulointerstitial nephritis antigen##EU832329|TINAG|27283|tubulointerstitial nephritis antigen##EU832414|TINAG|27283|tubulointerstitial nephritis antigen##AY358198|GFRAL|389400|GDNF family receptor alpha like##NM_207410|GFRAL|389400|GDNF family receptor alpha like##AL137605|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK293856|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##BC024194|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK055075|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK297191|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK294210|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK127587|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_001042406|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_019036|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##M60314|BMP5|653|bone morphogenetic protein 5##BC027958|BMP5|653|bone morphogenetic protein 5##NM_021073|BMP5|653|bone morphogenetic protein 5	0.95842	CTCF.p2:-33:0.958
chr10	134165721	134165890	reg1003429.p1	4.875	+	TSC_hg19_v1_chr10_+_134145696 AK098652 BC050097 AK295953 AB051461 BC029902 NM_001143757 AK097418	-20095	+	TSC_hg19_v1_chr10_+_134145617 NM_001143758 NM_001143759 NM_030626	-20191	+	TSC_hg19_v1_chr10_-_134145360 AK098366 AK308956 BC042566	-20459	-	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	44904	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	92878	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	185507	+	AK098652|LRRC27|80313|leucine rich repeat containing 27##BC050097|LRRC27|80313|leucine rich repeat containing 27##AK295953|LRRC27|80313|leucine rich repeat containing 27##AB051461|LRRC27|80313|leucine rich repeat containing 27##BC029902|LRRC27|80313|leucine rich repeat containing 27##NM_001143757|LRRC27|80313|leucine rich repeat containing 27##AK097418|LRRC27|80313|leucine rich repeat containing 27##NM_001143758|LRRC27|80313|leucine rich repeat containing 27##NM_001143759|LRRC27|80313|leucine rich repeat containing 27##NM_030626|LRRC27|80313|leucine rich repeat containing 27##AK098366|STK32C|282974|serine/threonine kinase 32C##AK308956|STK32C|282974|serine/threonine kinase 32C##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa	0.0	
chr11	62473443	62473624	reg1026783.p1	4.875	+	TSC_hg19_v1_chr11_-_62472904 CU678804 CU680238 CU692014	-591	-	NM_203422	-16163	-	AK291334 TSC_hg19_v1_chr11_-_62457003 AY358354 BC053902 AL834319	-16433	-	TSC_hg19_v1_chr11_-_62473729 BC041640 BC012140 BC004911 AK075317 AK225029 AK027524 NM_001130702 NM_032667	163	-	CU679517 DQ893483 EU176769 TSC_hg19_v1_chr11_-_62474716 BC093048	1163	-	TSC_hg19_v1_chr11_-_62474818 AF052149	1290	-	NM_203422|LRRN4CL|221091|LRRN4 C-terminal like##AK291334|LRRN4CL|221091|LRRN4 C-terminal like##AY358354|LRRN4CL|221091|LRRN4 C-terminal like##BC053902|LRRN4CL|221091|LRRN4 C-terminal like##AL834319|LRRN4CL|221091|LRRN4 C-terminal like##BC041640|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##BC012140|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##BC004911|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK075317|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK225029|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK027524|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##NM_001130702|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##NM_032667|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##DQ893483|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##EU176769|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##BC093048|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AF052149|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	0.0	
chr1	55476591	55476706	reg1027478.p2	4.875	+	AK129999 AY034632 NM_057176 BC103898 BC103899 BC103900	-12027	+	BC029775 NM_182532	-30184	+	NM_014762 TSC_hg19_v1_chr1_-_55352925	-123716	-	NM_174936 TSC_hg19_v1_chr1_+_55505192	28522	+	TSC_hg19_v1_chr1_+_55505220 AK075365	28576	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	204388	-	AK129999|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##AY034632|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_057176|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103898|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103899|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103900|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC029775|TMEM61|199964|transmembrane protein 61##NM_182532|TMEM61|199964|transmembrane protein 61##NM_014762|DHCR24|1718|24-dehydrocholesterol reductase##NM_174936|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##NM_015306|USP24|23358|ubiquitin specific peptidase 24	0.0	
chr2	197269140	197269243	reg1030906.p2	4.875	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-232873	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-232912	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-335696	-	BC117194 BC117198 AB037722 NM_020760	188101	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	235166	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	395222	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.0	
chr22	19023592	19023716	reg1029539.p2	4.875	+	TSC_hg19_v1_chr22_+_18957980 AB051434	-65648	+	BC118597 BC121809 NM_001195226 NM_016335 U79754	-99640	-	AB209472 TSC_hg19_v1_chr22_-_18923807 BC068260 BC094736 BC036534	-99923	-	CU012993 CU013281 CU691894 DQ894160 FJ032369 CR456433 L77560 X83545 TSC_hg19_v1_chr22_-_19109911 BC032430 D79985	86160	-	TSC_hg19_v1_chr22_-_19109938 BC020339 BC035425 CR936871 AK291670 AK295697 AK296337 AK304382 AK303130 BC040500 NM_001173533 NM_001173534 NM_001184781 NM_005137	86286	-	L77564 NM_053006	94666	+	AB051434|DGCR5|26220|DiGeorge syndrome critical region gene 5 (non-protein coding)##BC118597|PRODH|5625|proline dehydrogenase (oxidase) 1##BC121809|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_001195226|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_016335|PRODH|5625|proline dehydrogenase (oxidase) 1##U79754|PRODH|5625|proline dehydrogenase (oxidase) 1##AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1##BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1##BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1##BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1##CU012993|DGCR2|9993|DiGeorge syndrome critical region gene 2##CU013281|DGCR2|9993|DiGeorge syndrome critical region gene 2##DQ894160|DGCR2|9993|DiGeorge syndrome critical region gene 2##FJ032369|DGCR2|9993|DiGeorge syndrome critical region gene 2##CR456433|DGCR2|9993|DiGeorge syndrome critical region gene 2##L77560|DGCR2|9993|DiGeorge syndrome critical region gene 2##X83545|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC032430|DGCR2|9993|DiGeorge syndrome critical region gene 2##D79985|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC020339|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC035425|DGCR2|9993|DiGeorge syndrome critical region gene 2##CR936871|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK291670|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK295697|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK296337|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK304382|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK303130|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC040500|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001173533|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001173534|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001184781|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_005137|DGCR2|9993|DiGeorge syndrome critical region gene 2##L77564|TSSK2|23617|testis-specific serine kinase 2##NM_053006|TSSK2|23617|testis-specific serine kinase 2	0.0	
chr2	62568130	62568310	reg1028263.p1	4.875	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-144954	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-435391	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-452434	-	BC047439 AK091902 AX747245 NM_198276	165319	-	AK292545 NM_001142615	332765	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	364746	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr6	150144298	150144431	reg1035433.p1	4.875	+	TSC_hg19_v1_chr6_+_150070878 AK289724 BC007501 D13892 AK304532 AK129778 BC008748 D25545 D25546 D25547 M93008 CU675673	-73418	+	TSC_hg19_v1_chr6_+_150070845 AK098739	-73517	+	TSC_hg19_v1_chr6_+_150070835 NM_001252049 NM_001252050 NM_001252051 NM_001252052 NM_001252053 NM_005389	-73537	+	AK027641 AK223134 TSC_hg19_v1_chr6_-_150185169	40826	-	TSC_hg19_v1_chr6_-_150185496 BC025239 BC043141 NM_032832	41079	-	AY054974 AY176317 AY252119 EF489426 AF359243 BC101976 BC103694 AY069961 NM_001243325 NM_001243327 NM_139165	67738	-	AK289724|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##BC007501|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D13892|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK304532|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK129778|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##BC008748|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D25545|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D25546|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##D25547|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##M93008|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK098739|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252049|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252050|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252051|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252052|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_001252053|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##NM_005389|PCMT1|5110|protein-L-isoaspartate (D-aspartate) O-methyltransferase##AK027641|LRP11|84918|low density lipoprotein receptor-related protein 11##AK223134|LRP11|84918|low density lipoprotein receptor-related protein 11##BC025239|LRP11|84918|low density lipoprotein receptor-related protein 11##BC043141|LRP11|84918|low density lipoprotein receptor-related protein 11##NM_032832|LRP11|84918|low density lipoprotein receptor-related protein 11##AY054974|RAET1E|135250|retinoic acid early transcript 1E##AY176317|RAET1E|135250|retinoic acid early transcript 1E##AY252119|RAET1E|135250|retinoic acid early transcript 1E##EF489426|RAET1E|135250|retinoic acid early transcript 1E##AF359243|RAET1E|135250|retinoic acid early transcript 1E##BC101976|RAET1E|135250|retinoic acid early transcript 1E##BC103694|RAET1E|135250|retinoic acid early transcript 1E##AY069961|RAET1E|135250|retinoic acid early transcript 1E##NM_001243325|RAET1E|135250|retinoic acid early transcript 1E##NM_001243327|RAET1E|135250|retinoic acid early transcript 1E##NM_139165|RAET1E|135250|retinoic acid early transcript 1E	0.0	
chr6	90994229	90994349	reg1027505.p1	4.875	+	AB527151 AF296766 NM_032602	-390103	+	BC012574 TSC_hg19_v1_chr6_+_90539629 BC027850 AF154415 BC029386 BC132828 BC132830	-454590	+	TSC_hg19_v1_chr6_+_90539598 BC056685 NM_001137667 NM_001137668 NM_012115	-454695	+	AJ271878 TSC_hg19_v1_chr6_-_91006556 NM_021813	12222	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	12323	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	302394	-	AF296766|GJA10|84694|gap junction protein, alpha 10, 62kDa##NM_032602|GJA10|84694|gap junction protein, alpha 10, 62kDa##BC012574|CASP8AP2|9994|caspase 8 associated protein 2##BC027850|CASP8AP2|9994|caspase 8 associated protein 2##AF154415|CASP8AP2|9994|caspase 8 associated protein 2##BC029386|CASP8AP2|9994|caspase 8 associated protein 2##BC132828|CASP8AP2|9994|caspase 8 associated protein 2##BC132830|CASP8AP2|9994|caspase 8 associated protein 2##BC056685|CASP8AP2|9994|caspase 8 associated protein 2##NM_001137667|CASP8AP2|9994|caspase 8 associated protein 2##NM_001137668|CASP8AP2|9994|caspase 8 associated protein 2##NM_012115|CASP8AP2|9994|caspase 8 associated protein 2##AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7	0.0	
chr8	142394831	142394930	reg1026208.p2	4.875	+	NM_005293	-17516	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	-130690	-	AK128212 NM_001080431	-156208	-	TSC_hg19_v1_chr8_+_142402120 AK311257	7254	+	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	37181	+	BC144560 AK125848 AK131461 NM_207414	122437	-	NM_005293|GPR20|2843|G protein-coupled receptor 20##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein	0.689176	CTCF.p2:8:0.689
chrX	12788653	12788834	reg1029880.p2	4.875	+	AB002314 NM_014728 AK289694	-632153	+	NM_006800 AK025642	-1010996	+	NM_001193270 AK300814	-1012026	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	20754	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	20825	+	AK313858 BC033651 NM_016562 AF240467 AF245702	96455	+	AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7	0.999517	CTCF.p2:-3:1.000
chrX	40523659	40523777	reg1027276.p2	4.875	+	TSC_hg19_v1_chrX_-_40506814 AK095710 NM_144970	-16894	-	AK123989 TSC_hg19_v1_chrX_-_40506780 AL832829 CU692972 DQ892152 DQ895348 BC025334 AK304539 AK315384	-16986	-	NM_001195522	-40901	+	AF104256 AB590907 AF135802 TSC_hg19_v1_chrX_-_40594768 BC132672 BC132674 BC144231	70999	-	TSC_hg19_v1_chrX_-_40594795 AB006651 AF304448 BC098377 NM_004229	71070	-	TSC_hg19_v1_chrX_-_40594999 AK293070	71262	-	AK095710|CXorf38|159013|chromosome X open reading frame 38##NM_144970|CXorf38|159013|chromosome X open reading frame 38##AK123989|CXorf38|159013|chromosome X open reading frame 38##AL832829|CXorf38|159013|chromosome X open reading frame 38##DQ892152|CXorf38|159013|chromosome X open reading frame 38##DQ895348|CXorf38|159013|chromosome X open reading frame 38##BC025334|CXorf38|159013|chromosome X open reading frame 38##AK304539|CXorf38|159013|chromosome X open reading frame 38##AK315384|CXorf38|159013|chromosome X open reading frame 38##NM_001195522|LOC347411|347411|brain protein 44-like protein 2##AF104256|MED14|9282|mediator complex subunit 14##AF135802|MED14|9282|mediator complex subunit 14##BC132672|MED14|9282|mediator complex subunit 14##BC132674|MED14|9282|mediator complex subunit 14##BC144231|MED14|9282|mediator complex subunit 14##AB006651|MED14|9282|mediator complex subunit 14##AF304448|MED14|9282|mediator complex subunit 14##BC098377|MED14|9282|mediator complex subunit 14##NM_004229|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14	0.0938	
chr1	213243841	213243998	reg1035031.p1	4.874	+	TSC_hg19_v1_chr1_+_213224716 AB070706 EF491805	-19159	+	TSC_hg19_v1_chr1_+_213224692 BC104769 BC143449 BC143473 BC143474	-19242	+	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	-19332	+	AK298182 TSC_hg19_v1_chr1_+_214161296 U44060	917370	+	BC024201 NM_002763	917940	+	TSC_hg19_v1_chr1_+_214454550 BC068511 BC049367 BC094747 BC057793 NM_020197 AF226053 BC098133 BC098276 BC098305 BC098335 BC028104 AK313868 AB590916 BC039890	1210518	+	AB070706|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC104769|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143449|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143473|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##BC143474|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK298182|PROX1|5629|prospero homeobox 1##U44060|PROX1|5629|prospero homeobox 1##BC024201|PROX1|5629|prospero homeobox 1##NM_002763|PROX1|5629|prospero homeobox 1##BC068511|SMYD2|56950|SET and MYND domain containing 2##BC049367|SMYD2|56950|SET and MYND domain containing 2##BC094747|SMYD2|56950|SET and MYND domain containing 2##BC057793|SMYD2|56950|SET and MYND domain containing 2##NM_020197|SMYD2|56950|SET and MYND domain containing 2##AF226053|SMYD2|56950|SET and MYND domain containing 2##BC098133|SMYD2|56950|SET and MYND domain containing 2##BC098276|SMYD2|56950|SET and MYND domain containing 2##BC098305|SMYD2|56950|SET and MYND domain containing 2##BC098335|SMYD2|56950|SET and MYND domain containing 2##BC028104|SMYD2|56950|SET and MYND domain containing 2##AK313868|SMYD2|56950|SET and MYND domain containing 2##BC039890|SMYD2|56950|SET and MYND domain containing 2	0.0	
chr19	10691945	10692125	reg1000054.p2	4.874	+	TSC_hg19_v1_chr19_-_10679653 NM_001800 BC001822 NM_079421	-12397	-	CR542158 CU674892 U20498 DQ892872 DQ892951 DQ896120 AB464505 U49399 U40343 TSC_hg19_v1_chr19_-_10679530	-12606	-	TSC_hg19_v1_chr19_-_10676697 AK093879 AX748348 NM_023008 AK300850	-15338	-	CU678450 CU678534 CU678860 BC003612 BC003387 AF020797 AK222946 AK315689 AK023863 BC005021 NM_005498	5913	-	TSC_hg19_v1_chr19_+_10713140 NM_001145056 AK309801 AK027519	21098	+	TSC_hg19_v1_chr19_+_10736228 FN668568 NM_020428 AK314582 BC040556 BC042692	44184	+	NM_001800|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##BC001822|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##NM_079421|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##CR542158|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U20498|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892872|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892951|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ896120|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U49399|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U40343|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##AK093879|KRI1|65095|KRI1 homolog (S. cerevisiae)##NM_023008|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK300850|KRI1|65095|KRI1 homolog (S. cerevisiae)##BC003612|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##BC003387|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AF020797|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK222946|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK315689|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK023863|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##BC005021|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##NM_005498|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##NM_001145056|SLC44A2|57153|solute carrier family 44, member 2##AK309801|SLC44A2|57153|solute carrier family 44, member 2##AK027519|SLC44A2|57153|solute carrier family 44, member 2##FN668568|SLC44A2|57153|solute carrier family 44, member 2##NM_020428|SLC44A2|57153|solute carrier family 44, member 2##AK314582|SLC44A2|57153|solute carrier family 44, member 2##BC040556|SLC44A2|57153|solute carrier family 44, member 2##BC042692|SLC44A2|57153|solute carrier family 44, member 2	0.0	
chr2	103457822	103457962	reg1031944.p1	4.874	+	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	-79310	+	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	-104510	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	-104559	-	TSC_hg19_v1_chr2_-_105467912 AK096498	2010024	-	TSC_hg19_v1_chr2_+_105471877 NM_006236	2014006	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	2196622	+	CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182##AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##NM_006236|POU3F3|5455|POU class 3 homeobox 3##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9	0.931939	CTCF.p2:3:0.932
chr22	36462028	36462208	reg1014759.p1	4.874	+	AY072786 DQ778625 TSC_hg19_v1_chr22_-_36424553 AK055213 NM_001082578 NM_001082579	-37579	-	TSC_hg19_v1_chr22_-_36236476 AF229058 AL009266 AK314632 BC013115 BC025281 AK291460 NM_001031695 NM_001082576 NM_001082577 NM_014309	-225593	-	CR456559 TSC_hg19_v1_chr22_-_36236341	-225778	-	BC042918 BC038352 AK025349 AF070675 BC070144 AF305227 BC050596 AY014902 AY014903 AY014904 AY014905 NM_145640	94760	-	AY014906 AY014907 NM_145641 NM_145642	100106	-	AK290466 BC006276 AK313637 AK311506 AY014914 AY014915 NM_030643 NM_145660	138700	-	AY072786|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ778625|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK055213|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082578|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082579|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC042918|APOL3|80833|apolipoprotein L, 3##BC038352|APOL3|80833|apolipoprotein L, 3##AK025349|APOL3|80833|apolipoprotein L, 3##AF070675|APOL3|80833|apolipoprotein L, 3##AF305227|APOL3|80833|apolipoprotein L, 3##BC050596|APOL3|80833|apolipoprotein L, 3##AY014902|APOL3|80833|apolipoprotein L, 3##AY014903|APOL3|80833|apolipoprotein L, 3##AY014904|APOL3|80833|apolipoprotein L, 3##AY014905|APOL3|80833|apolipoprotein L, 3##NM_145640|APOL3|80833|apolipoprotein L, 3##AY014906|APOL3|80833|apolipoprotein L, 3##AY014907|APOL3|80833|apolipoprotein L, 3##NM_145641|APOL3|80833|apolipoprotein L, 3##NM_145642|APOL3|80833|apolipoprotein L, 3##AK290466|APOL4|80832|apolipoprotein L, 4##BC006276|APOL4|80832|apolipoprotein L, 4##AK313637|APOL4|80832|apolipoprotein L, 4##AK311506|APOL4|80832|apolipoprotein L, 4##AY014914|APOL4|80832|apolipoprotein L, 4##AY014915|APOL4|80832|apolipoprotein L, 4##NM_030643|APOL4|80832|apolipoprotein L, 4##NM_145660|APOL4|80832|apolipoprotein L, 4	0.999358	CTCF.p2:6:0.999
chr7	99994372	99994553	reg1028567.p2	4.874	+	TSC_hg19_v1_chr7_+_99971132 AJ400842 AJ400843 AK298731 AB590724 CU676074	-23257	+	AF161080 NM_013439 NM_178272 NM_178273 BC017812 TSC_hg19_v1_chr7_+_99971109 AJ400841	-23366	+	AJ400845 NM_178238 AF161081	-38831	+	AK302108 AK300745 TSC_hg19_v1_chr7_-_100026299 AL136735 NM_017984 AK299989	31840	-	NM_001194990 NM_001194991 NM_001194992 TSC_hg19_v1_chr7_+_100026412	31950	+	TSC_hg19_v1_chr7_+_100026415 AK055964	31966	+	AJ400842|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400843|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AK298731|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AF161080|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_013439|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178272|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178273|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##BC017812|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400841|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400845|PILRB|29990|paired immunoglobin-like type 2 receptor beta##NM_178238|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AF161081|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AK302108|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##AK300745|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##AL136735|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##NM_017984|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##AK299989|ZCWPW1|55063|zinc finger, CW type with PWWP domain 1##NM_001194990|MEPCE|56257|methylphosphate capping enzyme##NM_001194991|MEPCE|56257|methylphosphate capping enzyme##NM_001194992|MEPCE|56257|methylphosphate capping enzyme##AK055964|MEPCE|56257|methylphosphate capping enzyme	0.0	
chr9	92686545	92686653	reg1028185.p1	4.874	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-466618	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-573592	-	BC054500 NM_001142287 NM_006378	-591989	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	718520	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	877437	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	877468	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.023993	
chr1	180950913	180951043	reg1029394.p1	4.873	+	TSC_hg19_v1_chr1_+_180897572 BC000118	-53397	+	NM_020950 AB046834	-68660	+	AF099082 TSC_hg19_v1_chr1_+_180601194 AF115389 CU691970	-349701	+	BC009944 TSC_hg19_v1_chr1_-_180992009 AK299063 AK312440	41032	-	TSC_hg19_v1_chr1_-_180992052 NM_005819	41071	-	NM_001194999 NM_001195000 NM_001195035 NM_001531	51582	+	NM_020950|KIAA1614|57710|KIAA1614##AB046834|KIAA1614|57710|KIAA1614##AF099082|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##AF115389|XPR1|9213|xenotropic and polytropic retrovirus receptor 1##BC009944|STX6|10228|syntaxin 6##AK299063|STX6|10228|syntaxin 6##AK312440|STX6|10228|syntaxin 6##NM_005819|STX6|10228|syntaxin 6##NM_001194999|MR1|3140|major histocompatibility complex, class I-related##NM_001195000|MR1|3140|major histocompatibility complex, class I-related##NM_001195035|MR1|3140|major histocompatibility complex, class I-related##NM_001531|MR1|3140|major histocompatibility complex, class I-related	0.169104	
chr1	207579268	207579449	reg1004192.p3	4.873	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-84253	+	TSC_hg19_v1_chr1_+_207495084 AB240569 AB240570	-84281	+	TSC_hg19_v1_chr1_+_207495024 AK312448 AK300621 AK298549 BC001288 M30142 M31516	-84323	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	48303	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	90220	+	NM_175710 BC109190 BC109191	239129	+	AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240569|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240570|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK312448|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK300621|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK298549|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BC001288|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M30142|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M31516|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like	0.0	
chr1	31904651	31904794	reg1016122.p1	4.873	+	AK093784 AK316357 AX748305 NM_001199039 NM_018565 AK296118	-18035	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	-18656	+	NM_001199037 AK298512	-21689	+	NM_001204414 NM_022164 TSC_hg19_v1_chr1_+_32042115 AK292770 AK075398 AK296322 AK298382	137381	+	TSC_hg19_v1_chr1_+_32042122 AY358421	137400	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	137420	+	AK093784|SERINC2|347735|serine incorporator 2##AK316357|SERINC2|347735|serine incorporator 2##NM_001199039|SERINC2|347735|serine incorporator 2##NM_018565|SERINC2|347735|serine incorporator 2##AK296118|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##NM_001204414|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_022164|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK292770|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK075398|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK296322|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298382|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AY358421|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1	0.0	
chr13	98563926	98564053	reg1026970.p2	4.873	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	-477287	+	TSC_hg19_v1_chr13_+_98086350 AK315139 NM_021033 BC041333	-477552	+	TSC_hg19_v1_chr13_+_97999294 AF339832	-564695	+	NM_002271 BC045640	41948	+	TSC_hg19_v1_chr13_+_98628928 BX648222 AK303494 AK225286 BC001497 BC019309 DQ893033 EU176755 U72761	64843	+	TSC_hg19_v1_chr13_+_98795412 NM_001001715 NM_005766	231432	+	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family##AK315139|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_021033|RAP2A|5911|RAP2A, member of RAS oncogene family##BC041333|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_002271|IPO5|3843|importin 5##BC045640|IPO5|3843|importin 5##BX648222|IPO5|3843|importin 5##AK303494|IPO5|3843|importin 5##AK225286|IPO5|3843|importin 5##BC001497|IPO5|3843|importin 5##BC019309|IPO5|3843|importin 5##DQ893033|IPO5|3843|importin 5##EU176755|IPO5|3843|importin 5##U72761|IPO5|3843|importin 5##NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	0.997163	CTCF.p2:-1:0.997
chr18	20933262	20933360	reg1028680.p1	4.873	+	BC037218 NM_138375	-197523	+	EF028204 NM_001100619	-217585	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-419496	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	84560	-	AK057292 NM_003831	99475	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	99935	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.0	
chr20	11993026	11993138	reg1027856.p1	4.873	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-94525	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	-121633	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-1338513	-	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	996559	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	1209341	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	1626482	-	AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1	0.390755	CTCF.p2:-14:0.245
chr3	57947852	57948007	reg1028653.p2	4.873	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-204727	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-269190	-	TSC_hg19_v1_chr3_-_57583171 NM_001660	-364739	-	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	46218	+	NM_004944	252468	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	275354	+	AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_001660|ARF4|378|ADP-ribosylation factor 4##AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6	0.0	
chr6	157984825	157984942	reg1027814.p1	4.873	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-182344	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-239666	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-240299	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	259406	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	259491	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	418004	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.0	
chr7	126341194	126341321	reg1029693.p1	4.873	+	NM_001042594 NM_015450	-1771221	-	BC130600 BC130604 NM_001024603	-1910455	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	-1935461	-	NM_000845	542311	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	551108	-	TSC_hg19_v1_chr7_-_126893165 AK290197	551895	-	NM_001042594|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_015450|POT1|25913|protection of telomeres 1 homolog (S. pombe)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##AK290197|GRM8|2918|glutamate receptor, metabotropic 8	0.0	
chr9	127087565	127087745	reg1029797.p2	4.873	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	-33023	+	TSC_hg19_v1_chr9_+_127054267 NM_001166170 NM_001166171	-33396	+	TSC_hg19_v1_chr9_+_127020588 AL832574	-67065	+	TSC_hg19_v1_chr9_+_127119114 BC042968	31514	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	90065	-	AY278562 NM_001161808	125767	+	AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166170|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166171|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144	0.0	
chr1	94511430	94511557	reg1018108.p2	4.872	+	TSC_hg19_v1_chr1_-_94375075 AK290449	-136403	-	TSC_hg19_v1_chr1_-_94374987 NM_002061	-136489	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	-136531	-	AF001945 U88667 AK295818 AF000148 AB210040 DQ426859 NM_000350	75198	-	TSC_hg19_v1_chr1_-_94703141 BC093767 U90920 AK307733 BC022483	191571	-	TSC_hg19_v1_chr1_-_94703252 BC067839 NM_004815	191786	-	AK290449|GCLM|2730|glutamate-cysteine ligase, modifier subunit##NM_002061|GCLM|2730|glutamate-cysteine ligase, modifier subunit##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit##AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##BC093767|ARHGAP29|9411|Rho GTPase activating protein 29##U90920|ARHGAP29|9411|Rho GTPase activating protein 29##AK307733|ARHGAP29|9411|Rho GTPase activating protein 29##BC022483|ARHGAP29|9411|Rho GTPase activating protein 29##BC067839|ARHGAP29|9411|Rho GTPase activating protein 29##NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29	0.887561	CTCF.p2:-15:0.888
chr5	133968515	133968609	reg1022839.p2	4.872	+	BC002847 TSC_hg19_v1_chr5_-_133968519 AK223452 AF092130 BC093034 NM_001033503 NM_016103	-65	-	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	-106757	+	TSC_hg19_v1_chr5_+_133861359 AK056471 BC021962 AK292635 AK074123	-107199	+	TSC_hg19_v1_chr5_+_133984493 AK304060 NM_001252231 NM_021982 BC019341	15869	+	TSC_hg19_v1_chr5_+_134074237 NM_001745 BC130325 AK313156 BC063532 U18242 AB590695 HQ258172 AF068179	105748	+	NM_014829 TSC_hg19_v1_chr5_+_134094470 AK126011 AK291788 BC105598 AF106680 AB018344 BC012304 CU680282	125981	+	BC002847|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK223452|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AF092130|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##BC093034|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_001033503|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_016103|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15##AK056471|PHF15|23338|PHD finger protein 15##BC021962|PHF15|23338|PHD finger protein 15##AK292635|PHF15|23338|PHD finger protein 15##AK074123|PHF15|23338|PHD finger protein 15##AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001252231|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001745|CAMLG|819|calcium modulating ligand##BC130325|CAMLG|819|calcium modulating ligand##AK313156|CAMLG|819|calcium modulating ligand##BC063532|CAMLG|819|calcium modulating ligand##U18242|CAMLG|819|calcium modulating ligand##HQ258172|CAMLG|819|calcium modulating ligand##AF068179|CAMLG|819|calcium modulating ligand##NM_014829|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AK126011|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AK291788|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##BC105598|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AF106680|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AB018344|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##BC012304|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	0.0	
chr9	129942238	129942414	reg1029487.p1	4.872	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-57296	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-57364	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-57418	-	NM_032293 AK293732 AK095679	84481	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	217120	+	TSC_hg19_v1_chr9_-_130186602 AK124330	244240	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.0	
chr15	78200640	78200794	reg1028471.p2	4.871	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-275937	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-276018	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-487455	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	169236	-	NM_001101404	184209	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	223045	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.01957	
chr17	12935229	12935358	reg1029123.p1	4.871	+	TSC_hg19_v1_chr17_-_12921332 AK001392 NM_001165962 NM_018127 NM_173717	-13937	-	TSC_hg19_v1_chr17_-_12921325 AK298397 AK094687 BC001939 BC004158	-13974	-	TSC_hg19_v1_chr17_-_12921295 AK300011 AF304370 CR457261 CU674942	-14017	-	AY358838 TSC_hg19_v1_chr17_-_13505228 AF105376 NM_006042 AK292047	569944	-	TSC_hg19_v1_chr17_-_13972756 AK123100	1037469	-	NM_001303 TSC_hg19_v1_chr17_+_13972839 AK312718	1037486	+	AK001392|ELAC2|60528|elaC homolog 2 (E. coli)##NM_001165962|ELAC2|60528|elaC homolog 2 (E. coli)##NM_018127|ELAC2|60528|elaC homolog 2 (E. coli)##NM_173717|ELAC2|60528|elaC homolog 2 (E. coli)##AK298397|ELAC2|60528|elaC homolog 2 (E. coli)##AK094687|ELAC2|60528|elaC homolog 2 (E. coli)##BC001939|ELAC2|60528|elaC homolog 2 (E. coli)##BC004158|ELAC2|60528|elaC homolog 2 (E. coli)##AK300011|ELAC2|60528|elaC homolog 2 (E. coli)##AF304370|ELAC2|60528|elaC homolog 2 (E. coli)##CR457261|ELAC2|60528|elaC homolog 2 (E. coli)##AY358838|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AF105376|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_006042|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AK292047|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_001303|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK312718|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	0.993467	CTCF.p2:13:0.993
chr19	35047618	35047713	reg1025979.p2	4.871	+	TSC_hg19_v1_chr19_+_34972869 NM_001080436	-74793	+	TSC_hg19_v1_chr19_+_34919329 DQ893423 EU176757 CU678406 AF110957 BT009781 CR456756	-128324	+	TSC_hg19_v1_chr19_+_34919307 AF090384 AL136905 U35832	-128356	+	BC093909 BC093935 NM_001025591	37824	-	TSC_hg19_v1_chr19_+_35168582 AL834318 NM_001012320 NM_018443 AK074901 AF155656 AK315241 AF190157 AK297551 AK131278 BC024176 AF265236 AF326206	120984	+	TSC_hg19_v1_chr19_+_35225102 BC043228	177433	+	NM_001080436|WTIP|126374|Wilms tumor 1 interacting protein##DQ893423|UBA2|10054|ubiquitin-like modifier activating enzyme 2##EU176757|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AF110957|UBA2|10054|ubiquitin-like modifier activating enzyme 2##BT009781|UBA2|10054|ubiquitin-like modifier activating enzyme 2##CR456756|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AF090384|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AL136905|UBA2|10054|ubiquitin-like modifier activating enzyme 2##U35832|UBA2|10054|ubiquitin-like modifier activating enzyme 2##BC093909|SCGBL|284402|secretoglobin-like##BC093935|SCGBL|284402|secretoglobin-like##NM_001025591|SCGBL|284402|secretoglobin-like##AL834318|ZNF302|55900|zinc finger protein 302##NM_001012320|ZNF302|55900|zinc finger protein 302##NM_018443|ZNF302|55900|zinc finger protein 302##AK074901|ZNF302|55900|zinc finger protein 302##AF155656|ZNF302|55900|zinc finger protein 302##AK315241|ZNF302|55900|zinc finger protein 302##AF190157|ZNF302|55900|zinc finger protein 302##AK131278|ZNF302|55900|zinc finger protein 302##BC024176|ZNF302|55900|zinc finger protein 302##AF265236|ZNF302|55900|zinc finger protein 302##AF326206|ZNF302|55900|zinc finger protein 302##BC043228|ZNF181|339318|zinc finger protein 181	0.509113	CTCF.p2:4:0.509
chr19	8134394	8134488	reg1024287.p2	4.871	+	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	-16494	+	AK292662 NM_001201359 NM_005624	-16796	+	TSC_hg19_v1_chr19_-_8070526 U38175 BC003376 NM_001419	-63916	-	AB384635 AB053450 BC153882 NM_032447	77934	-	TSC_hg19_v1_chr19_+_8274253 NM_024552 AK222621 AK225394 AK022151 BC063621	139807	+	TSC_hg19_v1_chr19_-_8373195 CR457174 EU831651 BC036814 BC007083 AY358420 AL365455 BC000668 AK222623 AK315656 AL136652 AK058014 AF161254 NM_001165895 NM_016579	238768	-	BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25##AK292662|CCL25|6370|chemokine (C-C motif) ligand 25##NM_001201359|CCL25|6370|chemokine (C-C motif) ligand 25##NM_005624|CCL25|6370|chemokine (C-C motif) ligand 25##U38175|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##BC003376|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##NM_001419|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##AB053450|FBN3|84467|fibrillin 3##BC153882|FBN3|84467|fibrillin 3##NM_032447|FBN3|84467|fibrillin 3##NM_024552|CERS4|79603|ceramide synthase 4##AK222621|CERS4|79603|ceramide synthase 4##AK225394|CERS4|79603|ceramide synthase 4##AK022151|CERS4|79603|ceramide synthase 4##BC063621|CERS4|79603|ceramide synthase 4##CR457174|CD320|51293|CD320 molecule##EU831651|CD320|51293|CD320 molecule##BC036814|CD320|51293|CD320 molecule##BC007083|CD320|51293|CD320 molecule##AY358420|CD320|51293|CD320 molecule##AL365455|CD320|51293|CD320 molecule##BC000668|CD320|51293|CD320 molecule##AK222623|CD320|51293|CD320 molecule##AK315656|CD320|51293|CD320 molecule##AL136652|CD320|51293|CD320 molecule##AK058014|CD320|51293|CD320 molecule##AF161254|CD320|51293|CD320 molecule##NM_001165895|CD320|51293|CD320 molecule##NM_016579|CD320|51293|CD320 molecule	0.993684	CTCF.p2:-2:0.994
chrX	62453000	62453127	reg1027963.p1	4.871	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-4516104	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-4834603	+	NM_007157	-4834795	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	118136	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	195204	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	327804	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.92083	CTCF.p2:-10:0.921
chr10	69066453	69066589	reg1031533.p1	4.870	+	NM_178011 BX640611 AY358315 BC111492	-380706	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-3785280	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-3785359	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	358875	-	AF091606 AK313882 NM_013266	389416	-	CR457184 AF176013 BC017018 AK289537 AF176012 NM_021800 NM_201262	531331	-	NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##CR457184|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176013|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##BC017018|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AK289537|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176012|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_021800|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_201262|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12	0.980068	CTCF.p2:8:0.980
chr1	148346673	148346785	reg1026317.p2	4.870	+	NM_001164261 NM_001164262	-144194	-	TSC_hg19_v1_chr1_-_148176396 BC110832	-170333	-	AL117237 NM_015383 BC094705	-320875	-	NM_001170755 AK097180	211498	+	NM_173638 BC023087	214188	+	NM_001102663 AK290302 AY894566	230687	+	NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##AL117237|NBPF14|25832|neuroblastoma breakpoint family, member 14##NM_015383|NBPF14|25832|neuroblastoma breakpoint family, member 14##BC094705|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15##AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_173638|NBPF15|284565|neuroblastoma breakpoint family, member 15##BC023087|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15	0.389166	CTCF.p2:-50:0.389
chr2	14591560	14591695	reg1027236.p1	4.870	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-1733230	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	-1733711	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-1734374	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	181194	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	181224	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	1109802	-	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence	0.834766	CTCF.p2:0:0.835
chr6	52227453	52227569	reg1030525.p3	4.870	+	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	-554	+	TSC_hg19_v1_chr6_-_52149551 D38073 AK299566 NM_002388 AK301704	-77932	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	-77991	-	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	57567	+	AK297632 NM_001172420	58293	+	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	214247	-	NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##D38073|MCM3|4172|minichromosome maintenance complex component 3##AK299566|MCM3|4172|minichromosome maintenance complex component 3##NM_002388|MCM3|4172|minichromosome maintenance complex component 3##AK301704|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3##NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2	0.458772	CTCF.p2:3:0.459
chr8	50180464	50180589	reg1028351.p1	4.870	+	NM_001007176 BC017981 AJ276240	-195617	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-346616	-	AK021829 BC025676 BC029586 AK316037 AK299659 AK307101 NM_001142857 NM_024593	-532733	-	AJ003030 NM_018967	644070	+	EU170240 AY877349 NM_144651	2541427	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	2631076	-	NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##AK021829|EFCAB1|79645|EF-hand calcium binding domain 1##BC025676|EFCAB1|79645|EF-hand calcium binding domain 1##BC029586|EFCAB1|79645|EF-hand calcium binding domain 1##AK316037|EFCAB1|79645|EF-hand calcium binding domain 1##AK299659|EFCAB1|79645|EF-hand calcium binding domain 1##AK307101|EFCAB1|79645|EF-hand calcium binding domain 1##NM_001142857|EFCAB1|79645|EF-hand calcium binding domain 1##NM_024593|EFCAB1|79645|EF-hand calcium binding domain 1##AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.035559	
chr10	17779520	17779631	reg1026752.p1	4.869	+	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	-93345	+	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	-120202	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	-283210	-	NM_001098844 BC157856	14679	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	71828	+	NM_001098844 BC157856	261646	+	NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236	0.976734	CTCF.p2:-3:0.977
chr2	57987636	57987817	reg1005429.p2	4.869	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-1574817	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-1575960	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-1576521	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	286028	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	286262	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	480756	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.0	
chr6	106094456	106094604	reg1025782.p2	4.869	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-243535	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-243572	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-243684	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	439666	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	439705	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	452274	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.0	
chr7	115876342	115876480	reg1005364.p2	4.869	+	AK310995 NM_152829 AK291802 AF245357	-13392	+	NM_015641 AK299104 TSC_hg19_v1_chr7_+_115850592 BC001451 AK021575 AK300546 AK309324 AK222840 AF245356 AJ250865 AK315644 AB529039 EU176352 EU176694	-25758	+	TSC_hg19_v1_chr7_-_115670864 CR933605 NM_001018058 NM_012252	-205559	-	TSC_hg19_v1_chr7_+_116139705 AY353255 BC005256 NM_001206747 NM_001233 NM_198212 AK310786 AK311964 AF035752 AB451285 AB451417 AB489180 AM393815 BT007051 CR407685	263316	+	NM_001206748	263686	+	NM_001753 AK290871	288429	+	AK310995|TES|26136|testis derived transcript (3 LIM domains)##NM_152829|TES|26136|testis derived transcript (3 LIM domains)##AK291802|TES|26136|testis derived transcript (3 LIM domains)##AF245357|TES|26136|testis derived transcript (3 LIM domains)##NM_015641|TES|26136|testis derived transcript (3 LIM domains)##AK299104|TES|26136|testis derived transcript (3 LIM domains)##BC001451|TES|26136|testis derived transcript (3 LIM domains)##AK021575|TES|26136|testis derived transcript (3 LIM domains)##AK300546|TES|26136|testis derived transcript (3 LIM domains)##AK309324|TES|26136|testis derived transcript (3 LIM domains)##AK222840|TES|26136|testis derived transcript (3 LIM domains)##AF245356|TES|26136|testis derived transcript (3 LIM domains)##AJ250865|TES|26136|testis derived transcript (3 LIM domains)##AK315644|TES|26136|testis derived transcript (3 LIM domains)##EU176352|TES|26136|testis derived transcript (3 LIM domains)##EU176694|TES|26136|testis derived transcript (3 LIM domains)##CR933605|TFEC|22797|transcription factor EC##NM_001018058|TFEC|22797|transcription factor EC##NM_012252|TFEC|22797|transcription factor EC##AY353255|CAV2|858|caveolin 2##BC005256|CAV2|858|caveolin 2##NM_001206747|CAV2|858|caveolin 2##NM_001233|CAV2|858|caveolin 2##NM_198212|CAV2|858|caveolin 2##AK310786|CAV2|858|caveolin 2##AK311964|CAV2|858|caveolin 2##AF035752|CAV2|858|caveolin 2##AB451285|CAV2|858|caveolin 2##AB451417|CAV2|858|caveolin 2##AM393815|CAV2|858|caveolin 2##BT007051|CAV2|858|caveolin 2##CR407685|CAV2|858|caveolin 2##NM_001206748|CAV2|858|caveolin 2##NM_001753|CAV1|857|caveolin 1, caveolae protein, 22kDa##AK290871|CAV1|857|caveolin 1, caveolae protein, 22kDa	0.0	
chr7	155137086	155137160	reg1004289.p1	4.869	+	AK291675 TSC_hg19_v1_chr7_+_155089667	-47479	+	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	-47601	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	-274546	+	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	113641	+	BC105732 BC105733 BC105734 BC107598 NM_001103176 AK094445	189424	-	TSC_hg19_v1_chr7_-_155437101 AK091942 AX747269	299967	-	AK291675|INSIG1|3638|insulin induced gene 1##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2##BC105732|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105733|CNPY1|285888|canopy 1 homolog (zebrafish)##BC105734|CNPY1|285888|canopy 1 homolog (zebrafish)##BC107598|CNPY1|285888|canopy 1 homolog (zebrafish)##NM_001103176|CNPY1|285888|canopy 1 homolog (zebrafish)##AK094445|CNPY1|285888|canopy 1 homolog (zebrafish)	0.0	
chr8	145180700	145180880	reg1006057.p1	4.869	+	TSC_hg19_v1_chr8_+_145159398 BC031273 BC018714 BC014082 AL136937	-21377	+	NM_032272 TSC_hg19_v1_chr8_+_145159381	-21446	+	TSC_hg19_v1_chr8_-_145159154 AK075518 AB052764 AB052765 BC025244 NM_030974	-21639	-	BC003035 BC009915 NM_016458 AK098226 BC015471	11905	+	AK295740 NM_001099280 NM_001099281 NM_032450 AK093563 AX748203 BC057824 BC067855 BC092486	22138	+	AX721087 NM_001008271 NM_001080514	140699	+	BC031273|MAF1|84232|MAF1 homolog (S. cerevisiae)##BC018714|MAF1|84232|MAF1 homolog (S. cerevisiae)##BC014082|MAF1|84232|MAF1 homolog (S. cerevisiae)##AL136937|MAF1|84232|MAF1 homolog (S. cerevisiae)##NM_032272|MAF1|84232|MAF1 homolog (S. cerevisiae)##AK075518|SHARPIN|81858|SHANK-associated RH domain interactor##AB052764|SHARPIN|81858|SHANK-associated RH domain interactor##AB052765|SHARPIN|81858|SHANK-associated RH domain interactor##BC025244|SHARPIN|81858|SHANK-associated RH domain interactor##NM_030974|SHARPIN|81858|SHANK-associated RH domain interactor##BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##AK295740|HEATR7A|727957|HEAT repeat containing 7A##NM_001099280|HEATR7A|727957|HEAT repeat containing 7A##NM_001099281|HEATR7A|727957|HEAT repeat containing 7A##NM_032450|HEATR7A|727957|HEAT repeat containing 7A##AK093563|HEATR7A|727957|HEAT repeat containing 7A##BC057824|HEATR7A|727957|HEAT repeat containing 7A##BC067855|HEATR7A|727957|HEAT repeat containing 7A##BC092486|HEATR7A|727957|HEAT repeat containing 7A##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)	0.0	
chr13	22736079	22736233	reg1028363.p1	4.868	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-491008	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-557796	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-557847	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	1018959	+	TSC_hg19_v1_chr13_-_23949652 AK125458	1213494	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	1271684	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.0	
chr1	46309369	46309512	reg1030381.p2	4.868	+	TSC_hg19_v1_chr1_+_46269283 AB047005 NM_015112 BC065499	-40142	+	BC032544 TSC_hg19_v1_chr1_-_46216325 AK023880 NM_001145349 NM_005897	-93041	-	NM_016486 TSC_hg19_v1_chr1_+_46153865 AK024682 AK308613 BC104636 BC064539 BC013608 AF151063 BC034147 BC046130 BC121117 BC133692	-155565	+	TSC_hg19_v1_chr1_+_46379267 AK027123 AK309510	69822	+	TSC_hg19_v1_chr1_-_46598298 CR749649 BC021622 NM_003629 EU832448 EU832531 BX537388 BC094768 AK313726 NM_001114172	289038	-	NM_005727 AK313774	331313	+	AB047005|MAST2|23139|microtubule associated serine/threonine kinase 2##NM_015112|MAST2|23139|microtubule associated serine/threonine kinase 2##BC065499|MAST2|23139|microtubule associated serine/threonine kinase 2##BC032544|IPP|3652|intracisternal A particle-promoted polypeptide##AK023880|IPP|3652|intracisternal A particle-promoted polypeptide##NM_001145349|IPP|3652|intracisternal A particle-promoted polypeptide##NM_005897|IPP|3652|intracisternal A particle-promoted polypeptide##NM_016486|TMEM69|51249|transmembrane protein 69##AK024682|TMEM69|51249|transmembrane protein 69##BC104636|TMEM69|51249|transmembrane protein 69##BC064539|TMEM69|51249|transmembrane protein 69##BC013608|TMEM69|51249|transmembrane protein 69##AF151063|TMEM69|51249|transmembrane protein 69##BC034147|TMEM69|51249|transmembrane protein 69##BC046130|TMEM69|51249|transmembrane protein 69##BC121117|TMEM69|51249|transmembrane protein 69##BC133692|TMEM69|51249|transmembrane protein 69##AK027123|MAST2|23139|microtubule associated serine/threonine kinase 2##AK309510|MAST2|23139|microtubule associated serine/threonine kinase 2##CR749649|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BC021622|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_003629|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##EU832448|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##EU832531|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BX537388|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BC094768|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##AK313726|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_001114172|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_005727|TSPAN1|10103|tetraspanin 1##AK313774|TSPAN1|10103|tetraspanin 1	0.685817	CTCF.p2:19:0.686
chr3	30975780	30975889	reg1026927.p1	4.868	+	AL832766 NM_207359	-39682	-	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-327431	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-327812	+	TSC_hg19_v1_chr3_+_31574119 AK311488	598296	+	TSC_hg19_v1_chr3_+_31574468 AK074587	598615	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	598648	+	AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.0	
chr5	172093478	172093602	reg1028313.p2	4.868	+	AF275799 TSC_hg19_v1_chr5_-_172083715	-9897	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-25287	+	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	-212037	-	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	104671	-	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	167778	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	292908	+	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1	0.455788	CTCF.p2:-32:0.374
chrX	130926319	130926404	reg1007810.p1	4.868	+	BC137050 AB529233 NM_001004486	-248363	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-502949	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-503099	-	TSC_hg19_v1_chrX_-_130964633 AK097911	38290	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	230960	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	231279	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.0	
chr10	100618436	100618553	reg1026324.p1	4.867	+	TSC_hg19_v1_chr10_-_100206705 NM_000195 NM_182639	-411783	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	-411819	-	BC002514 TSC_hg19_v1_chr10_-_100206650	-411848	-	AJ299720 AK094037 BC112356 AF282885 AF282886 AF282887 AJ299719 AK314759 NM_001166244 NM_001166245 NM_001166246 NM_021828	377100	-	TSC_hg19_v1_chr10_+_101088794 NM_020348	470330	+	TSC_hg19_v1_chr10_+_101089114 AK308618	470632	+	NM_000195|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_182639|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1##AJ299720|HPSE2|60495|heparanase 2##AK094037|HPSE2|60495|heparanase 2##BC112356|HPSE2|60495|heparanase 2##AF282885|HPSE2|60495|heparanase 2##AF282886|HPSE2|60495|heparanase 2##AF282887|HPSE2|60495|heparanase 2##AJ299719|HPSE2|60495|heparanase 2##AK314759|HPSE2|60495|heparanase 2##NM_001166244|HPSE2|60495|heparanase 2##NM_001166245|HPSE2|60495|heparanase 2##NM_001166246|HPSE2|60495|heparanase 2##NM_021828|HPSE2|60495|heparanase 2##NM_020348|CNNM1|26507|cyclin M1##AK308618|CNNM1|26507|cyclin M1	0.792542	CTCF.p2:1:0.793
chr13	24040584	24040765	reg1010506.p1	4.867	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-32834	-	TSC_hg19_v1_chr13_-_23949652 AK125458	-91024	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	-285559	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	103781	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	112858	+	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	422342	+	NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.075133	
chr1	911881	911965	reg1013950.p2	4.867	+	AL136730 NM_001160184 NM_032129 BC101386 BC101387 AB463180 AM393848 BC141658	-10031	+	TSC_hg19_v1_chr1_+_895963 AK127585 AY423763 NM_198317 BC105742	-15936	+	BC003555 TSC_hg19_v1_chr1_-_894655 NM_015658	-17259	-	AB048791 DQ895490 TSC_hg19_v1_chr1_-_935444	23475	-	BC012351 TSC_hg19_v1_chr1_-_935476 NM_001142467 NM_021170	23587	-	NM_005101 TSC_hg19_v1_chr1_+_948876 M13755 BC009507	36956	+	AL136730|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##NM_001160184|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##NM_032129|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC101386|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC101387|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##AM393848|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC141658|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##AK127585|KLHL17|339451|kelch-like 17 (Drosophila)##AY423763|KLHL17|339451|kelch-like 17 (Drosophila)##NM_198317|KLHL17|339451|kelch-like 17 (Drosophila)##BC105742|KLHL17|339451|kelch-like 17 (Drosophila)##BC003555|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##NM_015658|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AB048791|HES4|57801|hairy and enhancer of split 4 (Drosophila)##DQ895490|HES4|57801|hairy and enhancer of split 4 (Drosophila)##BC012351|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_001142467|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_021170|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_005101|ISG15|9636|ISG15 ubiquitin-like modifier##M13755|ISG15|9636|ISG15 ubiquitin-like modifier##BC009507|ISG15|9636|ISG15 ubiquitin-like modifier	0.0	
chr2	106365193	106365303	reg1025679.p1	4.867	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	-3705	+	NM_201557	-310019	-	TSC_hg19_v1_chr2_-_106015453 BC093049 CR936799 BC036085 BC021049 AK313841 L42176 NM_001039492 BC012742 BC014397 DQ266432 NM_001450 NM_201555	-349697	-	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	67727	+	NM_001004720 BC000103	103013	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	316916	+	NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##NM_201557|FHL2|2274|four and a half LIM domains 2##BC093049|FHL2|2274|four and a half LIM domains 2##CR936799|FHL2|2274|four and a half LIM domains 2##BC036085|FHL2|2274|four and a half LIM domains 2##AK313841|FHL2|2274|four and a half LIM domains 2##L42176|FHL2|2274|four and a half LIM domains 2##NM_001039492|FHL2|2274|four and a half LIM domains 2##BC012742|FHL2|2274|four and a half LIM domains 2##BC014397|FHL2|2274|four and a half LIM domains 2##DQ266432|FHL2|2274|four and a half LIM domains 2##NM_001450|FHL2|2274|four and a half LIM domains 2##NM_201555|FHL2|2274|four and a half LIM domains 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40	0.102035	
chr4	103953771	103953922	reg1033308.p1	4.867	+	AY461581 TSC_hg19_v1_chr4_-_103940874 AF447585 DQ003059 NM_001100874 NM_139173	-12978	-	BC110794 TSC_hg19_v1_chr4_-_103940827 BC022079 BC046636 AK313592 BC132712 BC136966 BC144443	-13038	-	TSC_hg19_v1_chr4_+_103790197 AK292134 BC020831 BX537971 BC032300 AM392809 AM393385	-163630	+	BC047447 TSC_hg19_v1_chr4_-_103997468 AK299888	43627	-	TSC_hg19_v1_chr4_-_103997929 AK172823	44079	-	NM_178833	44323	-	AY461581|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##AF447585|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##DQ003059|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##NM_001100874|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##NM_139173|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC110794|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC022079|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC046636|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##AK313592|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC132712|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC136966|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC144443|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##AK292134|CISD2|493856|CDGSH iron sulfur domain 2##BC020831|CISD2|493856|CDGSH iron sulfur domain 2##BX537971|CISD2|493856|CDGSH iron sulfur domain 2##BC032300|CISD2|493856|CDGSH iron sulfur domain 2##AM392809|CISD2|493856|CDGSH iron sulfur domain 2##AM393385|CISD2|493856|CDGSH iron sulfur domain 2##BC047447|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##AK299888|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##AK172823|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##NM_178833|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2	0.7197	CTCF.p2:7:0.720
chr6	149068638	149068819	reg1008742.p2	4.867	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-519	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-404537	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-404738	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	570375	+	AK315038 NM_015093 AK307650	570713	+	AY340238 NM_001002255 BC130305 HQ258040	652780	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr8	67831722	67831859	reg1028872.p1	4.867	+	AK302169 NM_001136160	-48054	+	BC034576 NM_001136161 NM_173518 AK304170 AK302672 BX537587 AK303003	-48775	+	NM_013257 NM_170709 TSC_hg19_v1_chr8_+_67687465 AK223523 AK074666	-144335	+	TSC_hg19_v1_chr8_-_67837777 AK057116 AY264285	5959	-	NM_001193502	43034	-	BC055413 NM_001013626	108995	-	AK302169|C8orf45|157777|chromosome 8 open reading frame 45##NM_001136160|C8orf45|157777|chromosome 8 open reading frame 45##BC034576|C8orf45|157777|chromosome 8 open reading frame 45##NM_001136161|C8orf45|157777|chromosome 8 open reading frame 45##NM_173518|C8orf45|157777|chromosome 8 open reading frame 45##AK304170|C8orf45|157777|chromosome 8 open reading frame 45##AK302672|C8orf45|157777|chromosome 8 open reading frame 45##BX537587|C8orf45|157777|chromosome 8 open reading frame 45##AK303003|C8orf45|157777|chromosome 8 open reading frame 45##NM_013257|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3##NM_170709|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3##AK223523|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3##AK074666|SGK3|23678|serum/glucocorticoid regulated kinase family, member 3##AY264285|SNHG6|641638|small nucleolar RNA host gene 6 (non-protein coding)##NM_001193502|TCF24|100129654|transcription factor 24##BC055413|PPP1R42|286187|protein phosphatase 1, regulatory subunit 42##NM_001013626|PPP1R42|286187|protein phosphatase 1, regulatory subunit 42	0.910256	CTCF.p2:-5:0.910
chr11	118161624	118161719	reg1001356.p1	4.866	+	TSC_hg19_v1_chr11_-_118135197 NM_005797 NM_144765	-26448	-	AF030455 AY359061 TSC_hg19_v1_chr11_-_118135010 AF304447 AF275945 BC017774	-26652	-	TSC_hg19_v1_chr11_-_118134957 AK290326	-26705	-	NM_000733 AK301255 AK311641 AK292612 BC033578 BC049847 X03884 CU690624	13809	+	JN392069 BC039035 AK311971 TSC_hg19_v1_chr11_-_118213368 BC070321 NM_000732 NM_001040651	51718	-	AK299997 NM_000073 AK313966 AK315895 AK310622 BC069685 X04145 X60492 AK223314 AK310578 BC113830	53413	+	NM_005797|MPZL2|10205|myelin protein zero-like 2##NM_144765|MPZL2|10205|myelin protein zero-like 2##AF030455|MPZL2|10205|myelin protein zero-like 2##AY359061|MPZL2|10205|myelin protein zero-like 2##AF304447|MPZL2|10205|myelin protein zero-like 2##AF275945|MPZL2|10205|myelin protein zero-like 2##BC017774|MPZL2|10205|myelin protein zero-like 2##AK290326|MPZL2|10205|myelin protein zero-like 2##NM_000733|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##AK301255|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##AK311641|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##AK292612|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##BC049847|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##X03884|CD3E|916|CD3e molecule, epsilon (CD3-TCR complex)##BC039035|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##AK311971|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##BC070321|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##NM_000732|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##NM_001040651|CD3D|915|CD3d molecule, delta (CD3-TCR complex)##NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)	0.0	
chr11	119404874	119405001	reg1005574.p2	4.866	+	BC037832 NM_006288	-110694	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-111028	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	-152538	-	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	194445	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	594609	-	AK299472 TSC_hg19_v1_chr11_-_120008323	603335	-	BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29	0.711112	CTCF.p2:45:0.711
chr12	109549826	109549914	reg1025198.p2	4.866	+	NM_003362 TSC_hg19_v1_chr12_+_109535998 CR749342 AK299416 AK291341 X15653 BC050634 BC015205 CR541673 GQ129388 GQ129389	-13844	+	TSC_hg19_v1_chr12_+_109535398 NM_080911 AK313552 Y09008	-14461	+	BC070489 TSC_hg19_v1_chr12_-_109531278 AY754389 AK309062 NM_001001655 NM_001145374 NM_001145375 NM_001205179 NM_001205180	-18589	-	AY701053 TSC_hg19_v1_chr12_+_109551084	1192	+	TSC_hg19_v1_chr12_+_109554396 AY382667	4527	+	NM_001093 AJ575431 AJ575592 DQ493870 U89344 TSC_hg19_v1_chr12_+_109577280	27371	+	NM_003362|UNG|7374|uracil-DNA glycosylase##CR749342|UNG|7374|uracil-DNA glycosylase##AK299416|UNG|7374|uracil-DNA glycosylase##AK291341|UNG|7374|uracil-DNA glycosylase##X15653|UNG|7374|uracil-DNA glycosylase##BC050634|UNG|7374|uracil-DNA glycosylase##BC015205|UNG|7374|uracil-DNA glycosylase##CR541673|UNG|7374|uracil-DNA glycosylase##GQ129388|UNG|7374|uracil-DNA glycosylase##GQ129389|UNG|7374|uracil-DNA glycosylase##NM_080911|UNG|7374|uracil-DNA glycosylase##AK313552|UNG|7374|uracil-DNA glycosylase##Y09008|UNG|7374|uracil-DNA glycosylase##BC070489|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##AY754389|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##AK309062|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001001655|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001145374|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001145375|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001205179|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001205180|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##AY382667|ACACB|32|acetyl-CoA carboxylase beta##NM_001093|ACACB|32|acetyl-CoA carboxylase beta##AJ575431|ACACB|32|acetyl-CoA carboxylase beta##AJ575592|ACACB|32|acetyl-CoA carboxylase beta##DQ493870|ACACB|32|acetyl-CoA carboxylase beta##U89344|ACACB|32|acetyl-CoA carboxylase beta	0.63379	CTCF.p2:17:0.634
chr12	3946400	3946525	reg1027928.p1	4.866	+	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-84080	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-84194	-	AK125333 TSC_hg19_v1_chr12_-_3601984	-344477	-	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	36038	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	436582	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	483929	+	AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5	0.025749	
chr15	33190743	33190878	reg1029979.p1	4.866	+	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-179644	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-180553	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	-256896	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	169425	-	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	412359	+	TSC_hg19_v1_chr15_-_34212524 BC037796	1021748	-	AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3	0.0	
chr2	26178873	26178983	reg1029538.p2	4.866	+	TSC_hg19_v1_chr2_-_26101329 BX648218 CR933613 BX647527	-77505	-	TSC_hg19_v1_chr2_-_26101321 AB051472 NM_018263	-77614	-	TSC_hg19_v1_chr2_-_26101174 AB084279	-77755	-	BC092406 TSC_hg19_v1_chr2_-_26205366 AK293738 AK315324 BC042486 BX571741	26419	-	TSC_hg19_v1_chr2_-_26205437 NM_002254	26512	-	NM_016131 TSC_hg19_v1_chr2_+_26256952 AL136650 AK023223	77926	+	BX648218|ASXL2|55252|additional sex combs like 2 (Drosophila)##CR933613|ASXL2|55252|additional sex combs like 2 (Drosophila)##BX647527|ASXL2|55252|additional sex combs like 2 (Drosophila)##AB051472|ASXL2|55252|additional sex combs like 2 (Drosophila)##NM_018263|ASXL2|55252|additional sex combs like 2 (Drosophila)##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)##BC092406|KIF3C|3797|kinesin family member 3C##AK293738|KIF3C|3797|kinesin family member 3C##AK315324|KIF3C|3797|kinesin family member 3C##BC042486|KIF3C|3797|kinesin family member 3C##BX571741|KIF3C|3797|kinesin family member 3C##NM_002254|KIF3C|3797|kinesin family member 3C##NM_016131|RAB10|10890|RAB10, member RAS oncogene family##AL136650|RAB10|10890|RAB10, member RAS oncogene family##AK023223|RAB10|10890|RAB10, member RAS oncogene family	0.186168	
chr5	154429478	154429595	reg1029206.p1	4.866	+	NM_001099293 AK302388	-36250	+	TSC_hg19_v1_chr5_+_154320654 NM_001014990 NM_014180 AK000601 AK302784 CR933679 BC012565 AF161507 CU680362	-108887	+	TSC_hg19_v1_chr5_-_154317760 AB385260 AY063750 AK022748 BC113614 BC143724 BC036894 BC040931 AK074066 AK315101 NM_001252156 NM_015465	-111820	-	BX537948 NM_000337 NM_001128209 NM_172244	1324224	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	1324637	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	1960699	-	NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##NM_001014990|MRPL22|29093|mitochondrial ribosomal protein L22##NM_014180|MRPL22|29093|mitochondrial ribosomal protein L22##AK000601|MRPL22|29093|mitochondrial ribosomal protein L22##AK302784|MRPL22|29093|mitochondrial ribosomal protein L22##CR933679|MRPL22|29093|mitochondrial ribosomal protein L22##BC012565|MRPL22|29093|mitochondrial ribosomal protein L22##AF161507|MRPL22|29093|mitochondrial ribosomal protein L22##AY063750|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK022748|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC113614|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC143724|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC036894|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC040931|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK074066|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK315101|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_001252156|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_015465|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4	0.632079	CTCF.p2:22:0.632
chrX	153188445	153188538	reg1026712.p1	4.866	+	NM_000054 NM_001146151 Z11687 AF030626 AF032388 AF101727 AF101728 BC101484 BC112181 AB527584 AY242131	-17928	+	TSC_hg19_v1_chrX_-_153151599 BC021858	-36889	-	NM_000425 NM_001143963 NM_024003 BC126229 BC136447 TSC_hg19_v1_chrX_-_153141452	-47040	-	D50921 AM392626 AM393222 AB384442 TSC_hg19_v1_chrX_-_153191680	3171	-	TSC_hg19_v1_chrX_-_153191700 AY183123 X78817	3202	-	TSC_hg19_v1_chrX_-_153191719 BC052303 NM_001164741 NM_001666	3249	-	NM_000054|AVPR2|554|arginine vasopressin receptor 2##NM_001146151|AVPR2|554|arginine vasopressin receptor 2##Z11687|AVPR2|554|arginine vasopressin receptor 2##AF030626|AVPR2|554|arginine vasopressin receptor 2##AF032388|AVPR2|554|arginine vasopressin receptor 2##AF101727|AVPR2|554|arginine vasopressin receptor 2##AF101728|AVPR2|554|arginine vasopressin receptor 2##BC101484|AVPR2|554|arginine vasopressin receptor 2##BC112181|AVPR2|554|arginine vasopressin receptor 2##AY242131|AVPR2|554|arginine vasopressin receptor 2##NM_000425|L1CAM|3897|L1 cell adhesion molecule##NM_001143963|L1CAM|3897|L1 cell adhesion molecule##NM_024003|L1CAM|3897|L1 cell adhesion molecule##BC126229|L1CAM|3897|L1 cell adhesion molecule##BC136447|L1CAM|3897|L1 cell adhesion molecule##D50921|ARHGAP4|393|Rho GTPase activating protein 4##AM392626|ARHGAP4|393|Rho GTPase activating protein 4##AM393222|ARHGAP4|393|Rho GTPase activating protein 4##AY183123|ARHGAP4|393|Rho GTPase activating protein 4##X78817|ARHGAP4|393|Rho GTPase activating protein 4##BC052303|ARHGAP4|393|Rho GTPase activating protein 4##NM_001164741|ARHGAP4|393|Rho GTPase activating protein 4##NM_001666|ARHGAP4|393|Rho GTPase activating protein 4	0.041586	
chr10	126385298	126385433	reg1029676.p1	4.865	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-234944	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-246788	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-277847	-	D50930 TSC_hg19_v1_chr10_-_126432660	47279	-	TSC_hg19_v1_chr10_-_126432823 BC031654	47451	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	47546	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.0	
chr10	17272774	17272863	reg1023029.p2	4.865	+	TSC_hg19_v1_chr10_-_17271978 BC078172	-832	-	TSC_hg19_v1_chr10_+_17271962 AK093924	-839	+	TSC_hg19_v1_chr10_+_17271887 M25246	-930	+	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	223396	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	223547	-	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	386555	-	AK093924|VIM|7431|vimentin##M25246|VIM|7431|vimentin##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A	0.699929	CTCF.p2:16:0.700
chr1	2477830	2477903	reg1028767.p1	4.865	+	BC087840 DQ272660 NM_001010926	-16183	-	TSC_hg19_v1_chr1_-_2458040 AL442072 BC043496 AK001644 AK223546 AK303127 AK309860 NM_018216 AK295301	-19802	-	DQ176850 NM_014638 BC144620	-70109	+	AK300515 NM_003820 U70321 AK303468 BC029848 BC002794 BC018882 U81232 AF153978 AK310076 AB208808 AY358879 CU678202 AB590572 DQ893000 DQ896755 AF373877 AF373878 CR456909	10087	+	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	40322	+	TSC_hg19_v1_chr1_+_2518534 AK094901	40648	+	BC087840|HES5|388585|hairy and enhancer of split 5 (Drosophila)##DQ272660|HES5|388585|hairy and enhancer of split 5 (Drosophila)##NM_001010926|HES5|388585|hairy and enhancer of split 5 (Drosophila)##AL442072|PANK4|55229|pantothenate kinase 4##BC043496|PANK4|55229|pantothenate kinase 4##AK001644|PANK4|55229|pantothenate kinase 4##AK223546|PANK4|55229|pantothenate kinase 4##AK303127|PANK4|55229|pantothenate kinase 4##AK309860|PANK4|55229|pantothenate kinase 4##NM_018216|PANK4|55229|pantothenate kinase 4##AK295301|PANK4|55229|pantothenate kinase 4##DQ176850|PLCH2|9651|phospholipase C, eta 2##NM_014638|PLCH2|9651|phospholipase C, eta 2##BC144620|PLCH2|9651|phospholipase C, eta 2##AK300515|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##NM_003820|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U70321|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK303468|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC029848|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC002794|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC018882|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U81232|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF153978|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK310076|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AB208808|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AY358879|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ893000|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ896755|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373877|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373878|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##CR456909|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B##AK094901|FAM213B|127281|family with sequence similarity 213, member B	0.05378	
chr16	32050804	32050930	reg1023070.p2	4.865	+	TSC_hg19_v1_chr16_+_31885159 BC036367 BC127088 BC127089 AK292573	-165663	+	AF220492 TSC_hg19_v1_chr16_+_31885131	-165735	+	TSC_hg19_v1_chr16_+_31885114 AK096390	-165751	+	TSC_hg19_v1_chr16_-_32199418 AK300387	148552	-	AB023508 AB023509 BC096700 BC099842 NM_001243722 AK312220 CR541650	213791	+	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	636566	-	BC036367|ZNF267|10308|zinc finger protein 267##BC127088|ZNF267|10308|zinc finger protein 267##BC127089|ZNF267|10308|zinc finger protein 267##AK292573|ZNF267|10308|zinc finger protein 267##AF220492|ZNF267|10308|zinc finger protein 267##AK096390|ZNF267|10308|zinc finger protein 267##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AB023508|TP53TG3|24150|TP53 target 3##AB023509|TP53TG3|24150|TP53 target 3##BC096700|TP53TG3|24150|TP53 target 3##BC099842|TP53TG3|24150|TP53 target 3##NM_001243722|LOC729264|729264|TP53-target gene 3 protein-like##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3	3.771061	CTCF.p2:6:0.670	CTCF.p2:-36:0.999	CTCF.p2:44:0.725	CTCF.p2:-99:0.999	CTCF.p2:103:0.339
chr18	22642834	22642923	reg1028178.p1	4.865	+	AF312230 BC069136 NM_001143828 NM_001160166 NM_021624 AB045370 BC112348 AB044934 AF307973 AF325356 AF329449 AJ298292 AY008280 AY136745 DQ835186 DQ835187	-602236	+	TSC_hg19_v1_chr18_+_22006671 AK312727 BC034016 AB026264 AB587563 CU689806 DQ893141 EU176771 AF208694	-636213	+	TSC_hg19_v1_chr18_+_22006608 AK292533 NM_018439 BC036074	-636271	+	TSC_hg19_v1_chr18_-_22931121 AB385259	288270	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	289159	-	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	289285	-	AF312230|HRH4|59340|histamine receptor H4##BC069136|HRH4|59340|histamine receptor H4##NM_001143828|HRH4|59340|histamine receptor H4##NM_001160166|HRH4|59340|histamine receptor H4##NM_021624|HRH4|59340|histamine receptor H4##AB045370|HRH4|59340|histamine receptor H4##BC112348|HRH4|59340|histamine receptor H4##AB044934|HRH4|59340|histamine receptor H4##AF307973|HRH4|59340|histamine receptor H4##AF325356|HRH4|59340|histamine receptor H4##AF329449|HRH4|59340|histamine receptor H4##AJ298292|HRH4|59340|histamine receptor H4##AY008280|HRH4|59340|histamine receptor H4##AY136745|HRH4|59340|histamine receptor H4##DQ835186|HRH4|59340|histamine receptor H4##DQ835187|HRH4|59340|histamine receptor H4##AK312727|IMPACT|55364|Impact homolog (mouse)##BC034016|IMPACT|55364|Impact homolog (mouse)##AB026264|IMPACT|55364|Impact homolog (mouse)##DQ893141|IMPACT|55364|Impact homolog (mouse)##EU176771|IMPACT|55364|Impact homolog (mouse)##AF208694|IMPACT|55364|Impact homolog (mouse)##AK292533|IMPACT|55364|Impact homolog (mouse)##NM_018439|IMPACT|55364|Impact homolog (mouse)##BC036074|IMPACT|55364|Impact homolog (mouse)##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521	0.47843	CTCF.p2:6:0.370
chr4	169631638	169631758	reg1027183.p1	4.865	+	TSC_hg19_v1_chr4_+_169552755 NM_001166109 AK095512	-78902	+	TSC_hg19_v1_chr4_+_169418204 AF464873 NM_001166108 NM_016081 BC140850 BC144666	-213478	+	TSC_hg19_v1_chr4_-_169401630 CR933601 NM_001012967	-230078	-	TSC_hg19_v1_chr4_+_169753245 NM_001166110 AB023209	121479	+	BC021973 BC033650 TSC_hg19_v1_chr4_-_169931407 AK027337 AK291756 AK299847 AL833393 NM_032783	299760	-	BC041023 TSC_hg19_v1_chr4_-_170077830	446121	-	NM_001166109|PALLD|23022|palladin, cytoskeletal associated protein##AK095512|PALLD|23022|palladin, cytoskeletal associated protein##AF464873|PALLD|23022|palladin, cytoskeletal associated protein##NM_001166108|PALLD|23022|palladin, cytoskeletal associated protein##NM_016081|PALLD|23022|palladin, cytoskeletal associated protein##BC140850|PALLD|23022|palladin, cytoskeletal associated protein##BC144666|PALLD|23022|palladin, cytoskeletal associated protein##CR933601|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like##NM_001012967|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like##NM_001166110|PALLD|23022|palladin, cytoskeletal associated protein##AB023209|PALLD|23022|palladin, cytoskeletal associated protein##BC021973|CBR4|84869|carbonyl reductase 4##BC033650|CBR4|84869|carbonyl reductase 4##AK027337|CBR4|84869|carbonyl reductase 4##AK291756|CBR4|84869|carbonyl reductase 4##AL833393|CBR4|84869|carbonyl reductase 4##NM_032783|CBR4|84869|carbonyl reductase 4##BC041023|SH3RF1|57630|SH3 domain containing ring finger 1	0.0	
chr6	53821017	53821140	reg1028841.p2	4.865	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	-161147	+	TSC_hg19_v1_chr6_+_53659776 BC003193 NM_018214	-161319	+	TSC_hg19_v1_chr6_+_53659294 AK021896	-161778	+	NM_138569 BX647567 AK055530	62672	+	BC070278 NM_014464 AK312918 BC056235 AB022277 AF195116 AF195117 CU687080 CU691132 EU832329 EU832414	352197	+	AK055204 NM_001010872 BC101628 BC112275	890510	+	AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1##BC003193|LRRC1|55227|leucine rich repeat containing 1##NM_018214|LRRC1|55227|leucine rich repeat containing 1##AK021896|LRRC1|55227|leucine rich repeat containing 1##NM_138569|MLIP|90523|muscular LMNA-interacting protein##BX647567|MLIP|90523|muscular LMNA-interacting protein##AK055530|MLIP|90523|muscular LMNA-interacting protein##BC070278|TINAG|27283|tubulointerstitial nephritis antigen##NM_014464|TINAG|27283|tubulointerstitial nephritis antigen##AK312918|TINAG|27283|tubulointerstitial nephritis antigen##BC056235|TINAG|27283|tubulointerstitial nephritis antigen##AB022277|TINAG|27283|tubulointerstitial nephritis antigen##AF195116|TINAG|27283|tubulointerstitial nephritis antigen##AF195117|TINAG|27283|tubulointerstitial nephritis antigen##EU832329|TINAG|27283|tubulointerstitial nephritis antigen##EU832414|TINAG|27283|tubulointerstitial nephritis antigen##AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B	0.773118	CTCF.p2:-2:0.773
chr9	307060	307195	reg1025925.p1	4.865	+	TSC_hg19_v1_chr9_+_273045 HM991479 NM_001190458 NM_001193536 AK093572 AX748209 HM991480 BC045629 AK310555 BC130518 BC143929	-34074	+	NM_152569	-91235	-	AK293353 TSC_hg19_v1_chr9_+_214867	-92248	+	TSC_hg19_v1_chr9_+_504732 BX648931 AL832454 NM_015158 AK292989 AL833161 AK290028 AB205106	197621	+	AK311119 AB205111 TSC_hg19_v1_chr9_+_684289	377117	+	AB205112 TSC_hg19_v1_chr9_+_686677	379539	+	HM991479|DOCK8|81704|dedicator of cytokinesis 8##NM_001190458|DOCK8|81704|dedicator of cytokinesis 8##NM_001193536|DOCK8|81704|dedicator of cytokinesis 8##AK093572|DOCK8|81704|dedicator of cytokinesis 8##HM991480|DOCK8|81704|dedicator of cytokinesis 8##BC045629|DOCK8|81704|dedicator of cytokinesis 8##AK310555|DOCK8|81704|dedicator of cytokinesis 8##BC130518|DOCK8|81704|dedicator of cytokinesis 8##BC143929|DOCK8|81704|dedicator of cytokinesis 8##NM_152569|C9orf66|157983|chromosome 9 open reading frame 66##AK293353|DOCK8|81704|dedicator of cytokinesis 8##BX648931|KANK1|23189|KN motif and ankyrin repeat domains 1##AL832454|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_015158|KANK1|23189|KN motif and ankyrin repeat domains 1##AK292989|KANK1|23189|KN motif and ankyrin repeat domains 1##AL833161|KANK1|23189|KN motif and ankyrin repeat domains 1##AK290028|KANK1|23189|KN motif and ankyrin repeat domains 1##AB205106|KANK1|23189|KN motif and ankyrin repeat domains 1	0.0	
chr1	100743530	100743681	reg1029302.p1	4.864	+	TSC_hg19_v1_chr1_+_100731798 BC012604	-11803	+	TSC_hg19_v1_chr1_+_100731771 AK299793 NM_001130841 NM_003729 AK309394 Y11651 AK292366 AK307445	-11859	+	AK303941 AK313191 TSC_hg19_v1_chr1_-_100715394 X66785 NM_001918	-28206	-	TSC_hg19_v1_chr1_+_100818021 NM_003672 NM_033312 NM_033313	74412	+	TSC_hg19_v1_chr1_+_100818040 AF064102	74435	+	BC071578 TSC_hg19_v1_chr1_+_100818053 AF064103 AK310657 AF000367	74498	+	BC012604|RTCD1|8634|RNA terminal phosphate cyclase domain 1##AK299793|RTCD1|8634|RNA terminal phosphate cyclase domain 1##NM_001130841|RTCD1|8634|RNA terminal phosphate cyclase domain 1##NM_003729|RTCD1|8634|RNA terminal phosphate cyclase domain 1##Y11651|RTCD1|8634|RNA terminal phosphate cyclase domain 1##AK292366|RTCD1|8634|RNA terminal phosphate cyclase domain 1##AK307445|RTCD1|8634|RNA terminal phosphate cyclase domain 1##AK303941|DBT|1629|dihydrolipoamide branched chain transacylase E2##AK313191|DBT|1629|dihydrolipoamide branched chain transacylase E2##X66785|DBT|1629|dihydrolipoamide branched chain transacylase E2##NM_001918|DBT|1629|dihydrolipoamide branched chain transacylase E2##NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF064102|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)	0.017157	
chr11	406829	406932	reg1023179.p1	4.864	+	AF053719 TSC_hg19_v1_chr11_+_394242 DQ891692 DQ894875 CU674026	-12616	+	TSC_hg19_v1_chr11_+_394208 BC000081 NM_007183 AK025067 AK223511 Z98265	-12668	+	TSC_hg19_v1_chr11_+_369724 NM_178537 AB089939 BC131528	-37115	+	BC106007 NM_001135054 TSC_hg19_v1_chr11_-_415025	8124	-	BC025953 AK025099 AK172830 NM_001135053 NM_021805 AK093427	10509	-	BC144415 AK026923 TSC_hg19_v1_chr11_-_441974 AK303642 BC128557	35091	-	AF053719|PKP3|11187|plakophilin 3##DQ891692|PKP3|11187|plakophilin 3##DQ894875|PKP3|11187|plakophilin 3##BC000081|PKP3|11187|plakophilin 3##NM_007183|PKP3|11187|plakophilin 3##AK025067|PKP3|11187|plakophilin 3##AK223511|PKP3|11187|plakophilin 3##Z98265|PKP3|11187|plakophilin 3##NM_178537|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##AB089939|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC131528|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC106007|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_001135054|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##BC025953|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK025099|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK172830|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_001135053|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_021805|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK093427|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##BC144415|ANO9|338440|anoctamin 9##AK026923|ANO9|338440|anoctamin 9##AK303642|ANO9|338440|anoctamin 9##BC128557|ANO9|338440|anoctamin 9	0.986331	CTCF.p2:-2:0.986
chr13	37049710	37049873	reg1030220.p1	4.864	+	TSC_hg19_v1_chr13_+_37006631 AK225146 U66838 BC035479 BC036346 AB462995 AM393372 BT019577 DQ891303 DQ894488	-43098	+	AK314261 NM_001111045 NM_003914	-43383	+	NM_001111046 NM_001111047 TSC_hg19_v1_chr13_+_37006047 AK301897	-43772	+	BC036540 NM_203451 AK294236	198311	+	TSC_hg19_v1_chr13_+_37393356 NM_000538 AK313912 BC026088 DQ891169 DQ893581 DQ894352	343608	+	TSC_hg19_v1_chr13_-_37494376 BC067766 NM_001127217 NM_005905	444598	-	AK225146|CCNA1|8900|cyclin A1##U66838|CCNA1|8900|cyclin A1##BC035479|CCNA1|8900|cyclin A1##BC036346|CCNA1|8900|cyclin A1##AM393372|CCNA1|8900|cyclin A1##BT019577|CCNA1|8900|cyclin A1##DQ891303|CCNA1|8900|cyclin A1##DQ894488|CCNA1|8900|cyclin A1##AK314261|CCNA1|8900|cyclin A1##NM_001111045|CCNA1|8900|cyclin A1##NM_003914|CCNA1|8900|cyclin A1##NM_001111046|CCNA1|8900|cyclin A1##NM_001111047|CCNA1|8900|cyclin A1##AK301897|CCNA1|8900|cyclin A1##BC036540|SERTM1|400120|serine-rich and transmembrane domain containing 1##NM_203451|SERTM1|400120|serine-rich and transmembrane domain containing 1##AK294236|SERTM1|400120|serine-rich and transmembrane domain containing 1##NM_000538|RFXAP|5994|regulatory factor X-associated protein##AK313912|RFXAP|5994|regulatory factor X-associated protein##BC026088|RFXAP|5994|regulatory factor X-associated protein##DQ891169|RFXAP|5994|regulatory factor X-associated protein##DQ893581|RFXAP|5994|regulatory factor X-associated protein##DQ894352|RFXAP|5994|regulatory factor X-associated protein##BC067766|SMAD9|4093|SMAD family member 9##NM_001127217|SMAD9|4093|SMAD family member 9##NM_005905|SMAD9|4093|SMAD family member 9	0.019996	
chr15	20739052	20739167	reg1035041.p1	4.864	+	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-27672	-	None	None	None	None	None	None	NM_001145004	8004	-	NM_207355 BC066981	332869	-	NM_207355 BC066981	1344029	-	BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B	0.79594	CTCF.p2:5:0.796
chr15	29562195	29562325	reg1032597.p2	4.864	+	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	-231	-	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	-290	-	NM_001130414 NM_005503 AF047348 BC082986	-348411	+	NM_015307	300666	-	AK304758 TSC_hg19_v1_chr15_-_30114336	552082	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	552363	-	AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)	0.0	
chr19	16493953	16494111	reg1004896.p1	4.864	+	AF134053 TSC_hg19_v1_chr19_+_16435803	-58263	+	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	-58391	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	-185282	+	BC142662 AB527825 AF110265 BC131590 BC037558 TSC_hg19_v1_chr19_-_16582771 AB015346 NM_021235 BC067114 BC051873 BC142716 AK296473 AK297428 AK024166	88744	-	TSC_hg19_v1_chr19_-_16582810 AK291359	88820	-	CU677059 AB576176 DQ890903 DQ894056 AK058084 BC014595 NM_145046	112938	-	AF134053|KLF2|10365|Kruppel-like factor 2 (lung)##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)##AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC142662|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AF110265|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC131590|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC037558|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB015346|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##NM_021235|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC067114|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC051873|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC142716|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK296473|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK297428|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK024166|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK291359|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB576176|CALR3|125972|calreticulin 3##DQ890903|CALR3|125972|calreticulin 3##DQ894056|CALR3|125972|calreticulin 3##AK058084|CALR3|125972|calreticulin 3##BC014595|CALR3|125972|calreticulin 3##NM_145046|CALR3|125972|calreticulin 3	0.058539	
chr21	43722518	43722584	reg1032413.p1	4.864	+	TSC_hg19_v1_chr21_+_43710190 AF038175	-12338	+	AK298491 AF323664 NM_207174	-82583	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	-83258	+	L08044 DQ891963 DQ895153 L15203 BC017859 TSC_hg19_v1_chr21_-_43735520	12940	-	NM_003226 AF432265	13181	-	X51698 BC032820 NM_005423	48587	-	AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK298491|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323664|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207174|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##L08044|TFF3|7033|trefoil factor 3 (intestinal)##DQ891963|TFF3|7033|trefoil factor 3 (intestinal)##DQ895153|TFF3|7033|trefoil factor 3 (intestinal)##L15203|TFF3|7033|trefoil factor 3 (intestinal)##BC017859|TFF3|7033|trefoil factor 3 (intestinal)##NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2	0.0	
chr3	163669323	163669428	reg1025972.p2	4.864	+	NM_001080440	-2454780	+	AF458592 BC037817 NM_001040100	-2579567	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-2730254	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	1126903	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	1245130	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	1885818	-	NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase	0.995865	CTCF.p2:10:0.996
chr6	35725366	35725508	reg1031925.p1	4.864	+	AK058119 BC033033 NM_145028	-20579	+	BC042605 NM_001145775	-29078	-	TSC_hg19_v1_chr6_-_35656693 BC111050 AK222807 AK302704 AK303356 AK312422 BX647390 NM_001145776 AF194172 U71321 NM_001145777 NM_004117	-68731	-	AY358823 NM_207409	18954	+	DQ823638 BC150543 BC150544 BC133046 BC137392 NM_001010886	23388	+	AY780648 AY780649 BT006812 BC025693 J02883 BC043489 BC007061 BC017897 NM_001252597 NM_001252598 NM_001832	39651	-	AK058119|C6orf81|221481|chromosome 6 open reading frame 81##BC033033|C6orf81|221481|chromosome 6 open reading frame 81##NM_145028|C6orf81|221481|chromosome 6 open reading frame 81##BC042605|FKBP5|2289|FK506 binding protein 5##NM_001145775|FKBP5|2289|FK506 binding protein 5##BC111050|FKBP5|2289|FK506 binding protein 5##AK222807|FKBP5|2289|FK506 binding protein 5##AK302704|FKBP5|2289|FK506 binding protein 5##AK303356|FKBP5|2289|FK506 binding protein 5##AK312422|FKBP5|2289|FK506 binding protein 5##BX647390|FKBP5|2289|FK506 binding protein 5##NM_001145776|FKBP5|2289|FK506 binding protein 5##AF194172|FKBP5|2289|FK506 binding protein 5##U71321|FKBP5|2289|FK506 binding protein 5##NM_001145777|FKBP5|2289|FK506 binding protein 5##NM_004117|FKBP5|2289|FK506 binding protein 5##AY358823|C6orf126|389383|chromosome 6 open reading frame 126##NM_207409|C6orf126|389383|chromosome 6 open reading frame 126##DQ823638|C6orf127|340204|chromosome 6 open reading frame 127##BC150543|C6orf127|340204|chromosome 6 open reading frame 127##BC150544|C6orf127|340204|chromosome 6 open reading frame 127##BC133046|C6orf127|340204|chromosome 6 open reading frame 127##BC137392|C6orf127|340204|chromosome 6 open reading frame 127##NM_001010886|C6orf127|340204|chromosome 6 open reading frame 127##AY780648|CLPS|1208|colipase, pancreatic##AY780649|CLPS|1208|colipase, pancreatic##BT006812|CLPS|1208|colipase, pancreatic##BC025693|CLPS|1208|colipase, pancreatic##J02883|CLPS|1208|colipase, pancreatic##BC043489|CLPS|1208|colipase, pancreatic##BC007061|CLPS|1208|colipase, pancreatic##BC017897|CLPS|1208|colipase, pancreatic##NM_001252597|CLPS|1208|colipase, pancreatic##NM_001252598|CLPS|1208|colipase, pancreatic##NM_001832|CLPS|1208|colipase, pancreatic	0.041796	
chr8	145692371	145692551	reg1010602.p1	4.864	+	TSC_hg19_v1_chr8_+_145691719 BC017311 NM_145754	-724	+	TSC_hg19_v1_chr8_-_145690861 BC005073 NM_032687 BC056412 BC065484 NM_001129888	-1578	-	AK094514 NM_138496	-2044	-	AB463647 TSC_hg19_v1_chr8_-_145701232 BC051376 BC065377	8727	-	AF076292 NM_003923	9256	-	AK090471 TSC_hg19_v1_chr8_+_145703480	11000	+	BC017311|KIFC2|90990|kinesin family member C2##NM_145754|KIFC2|90990|kinesin family member C2##BC005073|CYHR1|50626|cysteine/histidine-rich 1##NM_032687|CYHR1|50626|cysteine/histidine-rich 1##BC056412|CYHR1|50626|cysteine/histidine-rich 1##BC065484|CYHR1|50626|cysteine/histidine-rich 1##NM_001129888|CYHR1|50626|cysteine/histidine-rich 1##AK094514|CYHR1|50626|cysteine/histidine-rich 1##NM_138496|CYHR1|50626|cysteine/histidine-rich 1##BC051376|FOXH1|8928|forkhead box H1##BC065377|FOXH1|8928|forkhead box H1##AF076292|FOXH1|8928|forkhead box H1##NM_003923|FOXH1|8928|forkhead box H1##AK090471|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A	0.912995	CTCF.p2:-9:0.913
chr9	136226308	136226410	reg1028390.p1	4.864	+	TSC_hg19_v1_chr9_+_136223420 NM_017503 BC014411 Z35094 DQ892595 DQ895819 CR456753	-2911	+	Z35093 TSC_hg19_v1_chr9_-_136223345 AK291122 BC028314 BC071658 NM_003172	-3005	-	CU687126 DQ890823 DQ893977 TSC_hg19_v1_chr9_-_136223336	-3026	-	Y14820 CU676306 AM392907 DQ892024 DQ895216 AB528538 BC018741 AK293434 BX647961 TSC_hg19_v1_chr9_-_136242890 BC111023	16505	-	TSC_hg19_v1_chr9_-_136242925 AK300004 AK299656 AK303309 AK316480	16569	-	AK295435 TSC_hg19_v1_chr9_-_136242933	16574	-	NM_017503|SURF2|6835|surfeit 2##BC014411|SURF2|6835|surfeit 2##Z35094|SURF2|6835|surfeit 2##DQ892595|SURF2|6835|surfeit 2##DQ895819|SURF2|6835|surfeit 2##CR456753|SURF2|6835|surfeit 2##Z35093|SURF1|6834|surfeit 1##AK291122|SURF1|6834|surfeit 1##BC028314|SURF1|6834|surfeit 1##BC071658|SURF1|6834|surfeit 1##NM_003172|SURF1|6834|surfeit 1##DQ890823|SURF1|6834|surfeit 1##DQ893977|SURF1|6834|surfeit 1##Y14820|SURF4|6836|surfeit 4##AM392907|SURF4|6836|surfeit 4##DQ892024|SURF4|6836|surfeit 4##DQ895216|SURF4|6836|surfeit 4##BC018741|SURF4|6836|surfeit 4##AK293434|SURF4|6836|surfeit 4##BX647961|SURF4|6836|surfeit 4##BC111023|SURF4|6836|surfeit 4##AK300004|SURF4|6836|surfeit 4##AK299656|SURF4|6836|surfeit 4##AK303309|SURF4|6836|surfeit 4##AK316480|SURF4|6836|surfeit 4##AK295435|SURF4|6836|surfeit 4	0.405409	CTCF.p2:2:0.405
chr9	86930117	86930274	reg1002923.p1	4.864	+	NM_024945 TSC_hg19_v1_chr9_+_86595689 BC039999 BC020606 AK022950 BC044571 BC053549 BC032494	-334486	+	TSC_hg19_v1_chr9_-_86595531 BC014980 AK291336 X72727 NM_002140 NM_031262	-334656	-	TSC_hg19_v1_chr9_-_86595168 NM_031263	-335020	-	BC093821 BC093823 AK310861 AK304406 AK314039 AK292849 NM_001199633	25439	-	AF305210 NM_022127	53217	-	TSC_hg19_v1_chr9_+_87283453 BC075804 NM_001018064 NM_006180 AB209118	353266	+	NM_024945|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC039999|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC020606|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##AK022950|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC044571|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC053549|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC032494|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC014980|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##AK291336|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##X72727|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_002140|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_031262|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_031263|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##BC093821|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093823|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK310861|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK304406|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK314039|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK292849|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_001199633|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AF305210|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_022127|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC075804|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018064|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_006180|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB209118|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	0.0	
chr11	121317734	121317915	reg1027212.p2	4.863	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	-154270	+	TSC_hg19_v1_chr11_+_121163484 AK096847 AK223141 AK222686	-154342	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	-154419	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	5125	+	TSC_hg19_v1_chr11_+_121323112 AK309523	5351	+	TSC_hg19_v1_chr11_+_121461071 AK294404	143274	+	BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK096847|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK223141|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK222686|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing	0.0	
chr1	241663300	241663437	reg1028455.p1	4.863	+	TSC_hg19_v1_chr1_-_241520469 BC022009 NM_002924	-142896	-	AF090116 AK314862 TSC_hg19_v1_chr1_-_241520451	-142950	-	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	-887914	-	TSC_hg19_v1_chr1_-_241683023 BT009839 AB590519 EU176358 BC017444 BC003108 U48857 U59309	19664	-	AK312415 TSC_hg19_v1_chr1_-_241683076 NM_000143	19712	-	NM_003679 AK310937 BC005297 AK291558 AF056032 Y13153 CU675097	32219	+	BC022009|RGS7|6000|regulator of G-protein signaling 7##NM_002924|RGS7|6000|regulator of G-protein signaling 7##AF090116|RGS7|6000|regulator of G-protein signaling 7##AK314862|RGS7|6000|regulator of G-protein signaling 7##AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2##BT009839|FH|2271|fumarate hydratase##EU176358|FH|2271|fumarate hydratase##BC017444|FH|2271|fumarate hydratase##BC003108|FH|2271|fumarate hydratase##U48857|FH|2271|fumarate hydratase##U59309|FH|2271|fumarate hydratase##AK312415|FH|2271|fumarate hydratase##NM_000143|FH|2271|fumarate hydratase##NM_003679|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AK310937|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##BC005297|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AK291558|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##AF056032|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)##Y13153|KMO|8564|kynurenine 3-monooxygenase (kynurenine 3-hydroxylase)	0.966259	CTCF.p2:27:0.966
chr14	61896908	61897089	reg1026465.p1	4.863	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-108471	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-148476	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-148804	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	265192	+	FJ790247 NM_001243084	267341	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	332121	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.0	
chr21	34638028	34638208	reg1026306.p1	4.863	+	TSC_hg19_v1_chr21_+_34602305 BC013156 X77722 X89814 U29584	-35716	+	TSC_hg19_v1_chr21_+_34602281 L41942 L41944	-35839	+	BC002793 NM_000874 NM_207584 NM_207585 TSC_hg19_v1_chr21_+_34602236	-35898	+	TSC_hg19_v1_chr21_+_34638697 AK313348 NM_000628 BC001903 Z17227	583	+	TSC_hg19_v1_chr21_+_34638753 AK299961 AB590138 DQ892552 DQ895763 BT009777	636	+	TSC_hg19_v1_chr21_+_34697236 NM_000629	59100	+	BC013156|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X77722|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X89814|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##U29584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41942|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41944|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##BC002793|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_000874|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207585|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##AK313348|IL10RB|3588|interleukin 10 receptor, beta##NM_000628|IL10RB|3588|interleukin 10 receptor, beta##BC001903|IL10RB|3588|interleukin 10 receptor, beta##Z17227|IL10RB|3588|interleukin 10 receptor, beta##AK299961|IL10RB|3588|interleukin 10 receptor, beta##DQ892552|IL10RB|3588|interleukin 10 receptor, beta##DQ895763|IL10RB|3588|interleukin 10 receptor, beta##BT009777|IL10RB|3588|interleukin 10 receptor, beta##NM_000629|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1	0.037851	
chr2	241752064	241752130	reg1031191.p1	4.863	+	AB040748 BC041460 NM_198998	-120836	+	BC157895 BC171912 BC139748 NM_001102467 BC041460	-129782	-	AK314002 NM_005301	-187436	+	BC064906 TSC_hg19_v1_chr2_-_241759637 AK307119 AB621817 AB210029 AB290172 NM_001244008 NM_004321	7578	-	NM_000030 X53414 BC132819 D13368 S71388 AK315331 TSC_hg19_v1_chr2_+_241808251 AK292754 AK298420 AB292648 X56092 AF348451 AK298400 AK316495	56171	+	BC125154 BC125155 AK026324 NM_024861 AK096434	79322	-	AB040748|AQP12A|375318|aquaporin 12A##BC041460|AQP12B|653437|aquaporin 12B##NM_198998|AQP12A|375318|aquaporin 12A##BC157895|AQP12B|653437|aquaporin 12B##BC171912|AQP12B|653437|aquaporin 12B##BC139748|AQP12B|653437|aquaporin 12B##NM_001102467|AQP12B|653437|aquaporin 12B##BC041460|AQP12B|653437|aquaporin 12B##AK314002|GPR35|2859|G protein-coupled receptor 35##NM_005301|GPR35|2859|G protein-coupled receptor 35##BC064906|KIF1A|547|kinesin family member 1A##AK307119|KIF1A|547|kinesin family member 1A##AB210029|KIF1A|547|kinesin family member 1A##AB290172|KIF1A|547|kinesin family member 1A##NM_001244008|KIF1A|547|kinesin family member 1A##NM_004321|KIF1A|547|kinesin family member 1A##NM_000030|AGXT|189|alanine-glyoxylate aminotransferase##X53414|AGXT|189|alanine-glyoxylate aminotransferase##BC132819|AGXT|189|alanine-glyoxylate aminotransferase##D13368|AGXT|189|alanine-glyoxylate aminotransferase##AK315331|AGXT|189|alanine-glyoxylate aminotransferase##AK292754|AGXT|189|alanine-glyoxylate aminotransferase##AK298420|AGXT|189|alanine-glyoxylate aminotransferase##AB292648|AGXT|189|alanine-glyoxylate aminotransferase##X56092|AGXT|189|alanine-glyoxylate aminotransferase##AF348451|AGXT|189|alanine-glyoxylate aminotransferase##AK298400|AGXT|189|alanine-glyoxylate aminotransferase##AK316495|AGXT|189|alanine-glyoxylate aminotransferase##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54	0.0	
chr5	176948320	176948500	reg1028386.p2	4.863	+	TSC_hg19_v1_chr5_-_176943963 BC015476 NM_016222	-4446	-	TSC_hg19_v1_chr5_-_176943961 AK027768 AK091774 AK315491	-4450	-	AK001255 AK092585 AK222598 AX747613 TSC_hg19_v1_chr5_-_176943952	-4459	-	AB067518 TSC_hg19_v1_chr5_-_176981559 NM_001190946	33138	-	TSC_hg19_v1_chr5_+_177019199 AK313292 BC001123 NM_017510 AF441399 AK298435	70824	+	TSC_hg19_v1_chr5_+_177027143 BC007317 NM_007255 BC072403 AY358578 BC062983 AB028600 AK023506 AF142675 DQ893010 DQ896256 AB527637 AJ005382	78744	+	BC015476|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##NM_016222|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK027768|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK091774|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK315491|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK001255|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK092585|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK222598|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AB067518|FAM193B|54540|family with sequence similarity 193, member B##NM_001190946|FAM193B|54540|family with sequence similarity 193, member B##AK313292|TMED9|54732|transmembrane emp24 protein transport domain containing 9##BC001123|TMED9|54732|transmembrane emp24 protein transport domain containing 9##NM_017510|TMED9|54732|transmembrane emp24 protein transport domain containing 9##AF441399|TMED9|54732|transmembrane emp24 protein transport domain containing 9##AK298435|TMED9|54732|transmembrane emp24 protein transport domain containing 9##BC007317|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##NM_007255|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC072403|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AY358578|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC062983|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AB028600|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AK023506|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF142675|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ893010|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ896256|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AJ005382|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	0.564832	CTCF.p2:-6:0.565
chr6	82443945	82444050	reg1028700.p2	4.863	+	TSC_hg19_v1_chr6_+_80816397 AK289977 BC040139 M55575 AB529112 BT020063 X52446	-1627560	+	TSC_hg19_v1_chr6_+_80816387 AK316545 BC034481	-1627614	+	TSC_hg19_v1_chr6_+_80816367 NM_000056 NM_183050 AK304353 U50708	-1627670	+	AY740520 FJ211061 CU674334 CU675631 TSC_hg19_v1_chr6_-_82461975	17924	-	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	18414	-	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	513416	-	AK289977|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC040139|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##M55575|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BT020063|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##X52446|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK316545|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC034481|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##NM_000056|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##NM_183050|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK304353|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##U50708|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AY740520|FAM46A|55603|family with sequence similarity 46, member A##AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase	0.579434	CTCF.p2:-13:0.579
chr8	145800932	145801062	reg1030456.p1	4.863	+	AK092501 AX747574 TSC_hg19_v1_chr8_-_145770830	-30241	-	BC064829 BC036712 TSC_hg19_v1_chr8_-_145754451 BC064373 NM_001001795 BC073936	-46564	-	TSC_hg19_v1_chr8_-_145752408 BC111067 NM_001024678	-48587	-	AB051475 NM_025251	37890	-	TSC_hg19_v1_chr8_-_145911232 AK296353	110230	-	TSC_hg19_v1_chr8_-_145980846 AK000435	179857	-	AK092501|ARHGAP39|80728|Rho GTPase activating protein 39##BC064829|C8orf82|414919|chromosome 8 open reading frame 82##BC064373|C8orf82|414919|chromosome 8 open reading frame 82##NM_001001795|C8orf82|414919|chromosome 8 open reading frame 82##BC073936|C8orf82|414919|chromosome 8 open reading frame 82##BC111067|LRRC24|441381|leucine rich repeat containing 24##NM_001024678|LRRC24|441381|leucine rich repeat containing 24##AB051475|ARHGAP39|80728|Rho GTPase activating protein 39##NM_025251|ARHGAP39|80728|Rho GTPase activating protein 39##AK296353|ARHGAP39|80728|Rho GTPase activating protein 39##AK000435|ZNF251|90987|zinc finger protein 251	0.750325	CTCF.p2:14:0.733
chr19	2208769	2208836	reg1032408.p1	4.862	+	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	-44664	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-57249	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	-57260	-	BC021037 TSC_hg19_v1_chr19_+_2222534	13672	+	BC032803 TSC_hg19_v1_chr19_+_2232168	23319	+	CR457253 CU679203 TSC_hg19_v1_chr19_-_2236329 AK092742 AX747701 BC003084 BC008966 AK001159 NM_018049	27487	-	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##CR457253|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK092742|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC003084|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC008966|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK001159|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##NM_018049|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1	0.788656	CTCF.p2:-17:0.789
chr19	42538967	42539088	reg1023171.p1	4.862	+	TSC_hg19_v1_chr19_-_42498383 BC009282 BC009394 BC015566 BC013763 AK307921 AK316069 AK223569 AK293784 AK295078 NM_152296	-40655	-	AK295833 TSC_hg19_v1_chr19_-_42498254	-40790	-	TSC_hg19_v1_chr19_-_42463500 NM_006423	-75507	-	S40369 AJ249209 BC131717 NM_002088	30911	-	TSC_hg19_v1_chr19_+_42580286 NM_022752	41255	+	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	41339	+	BC009282|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC009394|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC015566|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC013763|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK307921|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK316069|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK223569|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK293784|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK295078|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##NM_152296|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK295833|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)##S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_022752|ZNF574|64763|zinc finger protein 574##AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574	0.999922	CTCF.p2:38:1.000
chr21	36042065	36042240	reg1031193.p1	4.862	+	AF448438 AF448439 NM_053277	-465	+	BT007363 CU678256 AF303449 U85266 TSC_hg19_v1_chr21_-_35987486 BC002864 AK092184 AX747397 NM_004414 AY325903	-54806	-	NM_203417 U85265	-55408	-	S76350 GU070939 TSC_hg19_v1_chr21_-_36231874	189684	-	S76345 S76346 GU070941 TSC_hg19_v1_chr21_-_36252995	210784	-	TSC_hg19_v1_chr21_-_36259250 EU093088	217120	-	AF448438|CLIC6|54102|chloride intracellular channel 6##AF448439|CLIC6|54102|chloride intracellular channel 6##NM_053277|CLIC6|54102|chloride intracellular channel 6##BT007363|RCAN1|1827|regulator of calcineurin 1##AF303449|RCAN1|1827|regulator of calcineurin 1##U85266|RCAN1|1827|regulator of calcineurin 1##BC002864|RCAN1|1827|regulator of calcineurin 1##AK092184|RCAN1|1827|regulator of calcineurin 1##NM_004414|RCAN1|1827|regulator of calcineurin 1##AY325903|RCAN1|1827|regulator of calcineurin 1##NM_203417|RCAN1|1827|regulator of calcineurin 1##U85265|RCAN1|1827|regulator of calcineurin 1##S76350|RUNX1|861|runt-related transcription factor 1##S76345|RUNX1|861|runt-related transcription factor 1##S76346|RUNX1|861|runt-related transcription factor 1	0.0	
chr2	171785590	171785715	reg1013148.p2	4.862	+	NM_001201428 AL117430 AK125761 NM_015530	-661	+	TSC_hg19_v1_chr2_+_171673396 AK292582 BC026349 BC002815 S61898 L16888 Z22750	-112240	+	M81883 NM_000817 NM_013445 BC037780 TSC_hg19_v1_chr2_+_171673241	-112493	+	TSC_hg19_v1_chr2_+_171785776 AK315508 AK023201 AK225810 AK293640 AK023082	49	+	TSC_hg19_v1_chr2_+_171785781 AK298020 BC007770 BC001408 AK296698 AK027349 AB528359 DQ892715 DQ895965 CU675801	162	+	AK301857 NM_001136555	137830	-	NM_001201428|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AL117430|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK125761|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##NM_015530|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK292582|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC026349|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC002815|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##S61898|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##L16888|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##Z22750|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##M81883|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_000817|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_013445|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC037780|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##AK315508|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023201|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK225810|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK293640|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023082|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK298020|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC007770|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC001408|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK296698|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK027349|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ892715|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ895965|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK301857|TLK1|9874|tousled-like kinase 1##NM_001136555|TLK1|9874|tousled-like kinase 1	0.097172	
chr3	180894543	180894633	reg1026437.p1	4.862	+	NM_001190233 TSC_hg19_v1_chr3_-_180707525 AK311765 BC073989 BC009702 AK309019 AK307097 NM_145261	-187155	-	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	-264110	+	TSC_hg19_v1_chr3_+_180630246 NM_001013438 NM_001013439 NM_005087	-264405	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	522804	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	535125	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	535550	+	NM_001190233|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK311765|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC073989|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC009702|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK307097|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##NM_145261|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013438|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013439|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_005087|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2	0.0	
chr4	4695166	4695232	reg1039043.p2	4.862	+	TSC_hg19_v1_chr4_+_4543925 BC025734	-151315	+	TSC_hg19_v1_chr4_-_4543750 NM_016930	-151438	-	TSC_hg19_v1_chr4_-_4543741 AK310026	-151468	-	TSC_hg19_v1_chr4_+_4861391 NM_002448 AK290636 M97676 BC021285	166199	+	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	325947	-	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	358081	+	BC025734|LOC100507266|100507266|uncharacterized LOC100507266##NM_016930|STX18|53407|syntaxin 18##AK310026|STX18|53407|syntaxin 18##NM_002448|MSX1|4487|msh homeobox 1##AK290636|MSX1|4487|msh homeobox 1##M97676|MSX1|4487|msh homeobox 1##BC021285|MSX1|4487|msh homeobox 1##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B	0.0	
chr5	113018341	113018488	reg1027979.p1	4.862	+	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	-169018	+	AK128596 NM_001085377	-193888	-	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	-247782	-	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	679635	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	680047	+	BC015371 NM_170775 BC040722	750835	+	AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2##AK128596|MCC|4163|mutated in colorectal cancers##NM_001085377|MCC|4163|mutated in colorectal cancers##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	0.0	
chr5	167849629	167849712	reg1025017.p1	4.862	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	-130849	+	HE578282 HE578283 NM_001122679	-1137828	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-4917027	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	63804	+	TSC_hg19_v1_chr5_+_167956546 AX721195	106947	+	TSC_hg19_v1_chr5_-_168006352 AK223285 AK022961	156681	-	NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase##AK223285|PANK3|79646|pantothenate kinase 3##AK022961|PANK3|79646|pantothenate kinase 3	0.044194	
chr6	132714086	132714202	reg1031921.p1	4.862	+	BT019794 BT019795 CR541734 CR541759 AB463538 AY550024 AY395801 M92934 X78947 BC087839 TSC_hg19_v1_chr6_-_132272513 AK125220 AK290884 AK315207 AK092280 NM_001901	-441730	-	TSC_hg19_v1_chr6_+_132129249 BC033008 AK314870	-584883	+	TSC_hg19_v1_chr6_+_132129157 NM_006208 BC059375 D12485 M57736	-584983	+	CU676314 DQ892164 DQ895358 TSC_hg19_v1_chr6_-_132722615 AY359094 BC018756 NM_015529	8472	-	U77942 TSC_hg19_v1_chr6_-_132834222 BC011975 AK294911 AK301464 NM_003569	120106	-	BC069083 NM_175057 AY183469	145283	+	BT019794|CTGF|1490|connective tissue growth factor##BT019795|CTGF|1490|connective tissue growth factor##CR541734|CTGF|1490|connective tissue growth factor##CR541759|CTGF|1490|connective tissue growth factor##AY550024|CTGF|1490|connective tissue growth factor##AY395801|CTGF|1490|connective tissue growth factor##M92934|CTGF|1490|connective tissue growth factor##X78947|CTGF|1490|connective tissue growth factor##BC087839|CTGF|1490|connective tissue growth factor##AK125220|CTGF|1490|connective tissue growth factor##AK290884|CTGF|1490|connective tissue growth factor##AK315207|CTGF|1490|connective tissue growth factor##AK092280|CTGF|1490|connective tissue growth factor##NM_001901|CTGF|1490|connective tissue growth factor##BC033008|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##AK314870|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##NM_006208|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##BC059375|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##D12485|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##M57736|ENPP1|5167|ectonucleotide pyrophosphatase/phosphodiesterase 1##DQ892164|MOXD1|26002|monooxygenase, DBH-like 1##DQ895358|MOXD1|26002|monooxygenase, DBH-like 1##AY359094|MOXD1|26002|monooxygenase, DBH-like 1##BC018756|MOXD1|26002|monooxygenase, DBH-like 1##NM_015529|MOXD1|26002|monooxygenase, DBH-like 1##U77942|STX7|8417|syntaxin 7##BC011975|STX7|8417|syntaxin 7##AK294911|STX7|8417|syntaxin 7##AK301464|STX7|8417|syntaxin 7##NM_003569|STX7|8417|syntaxin 7##BC069083|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##NM_175057|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)##AY183469|TAAR9|134860|trace amine associated receptor 9 (gene/pseudogene)	0.996791	CTCF.p2:-16:0.997
chr7	113044401	113044581	reg1029175.p2	4.862	+	TSC_hg19_v1_chr7_-_112758613 BC107860	-285862	-	TSC_hg19_v1_chr7_-_112758606 BC065765 BX537645	-285885	-	NM_001146265 NM_018970 TSC_hg19_v1_chr7_-_112727844	-316651	-	X78578 AF024579 HQ258594 BC070313 BC056666 NM_002711 BC126451 BC126453	514592	-	TSC_hg19_v1_chr7_+_113726381 AK131266	681930	+	TSC_hg19_v1_chr7_+_113726514 AF454830	682012	+	BC107860|LOC401397|401397|uncharacterized LOC401397##BC065765|LOC401397|401397|uncharacterized LOC401397##BX537645|LOC401397|401397|uncharacterized LOC401397##NM_001146265|GPR85|54329|G protein-coupled receptor 85##NM_018970|GPR85|54329|G protein-coupled receptor 85##X78578|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AF024579|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##HQ258594|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC070313|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC056666|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##NM_002711|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126451|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126453|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AK131266|FOXP2|93986|forkhead box P2##AF454830|FOXP2|93986|forkhead box P2	0.989752	CTCF.p2:-6:0.990
chr10	6448326	6448443	reg1029104.p1	4.861	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-203508	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-261472	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-261500	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	173877	-	TSC_hg19_v1_chr10_+_6622460 AY007155	174096	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	1002866	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.0	
chr1	109112883	109112990	reg1026495.p1	4.861	+	BC127898 BC150530 NM_001010883 BC140863 BC140865	-9894	+	NM_001143987 NM_001143988 BC125161 BC125162	-120014	+	BC125161 BC125162 AK057395 AK316438 AK302318 NM_001143989	-326254	-	BC088366 TSC_hg19_v1_chr1_-_109203698 NM_001102592 BC012198	90832	-	TSC_hg19_v1_chr1_-_109204071 AK311542 AK310152 AK055087 NM_144584	91155	-	TSC_hg19_v1_chr1_+_109234948 NM_018061 BC040127 BC053838 BC034581 BC007757 BC024275 BC009453 BC016296 AL833950 AK001192 BC130346 BC132963 BC144243 BC107801 CU691032	122124	+	BC127898|FAM102B|284611|family with sequence similarity 102, member B##BC150530|FAM102B|284611|family with sequence similarity 102, member B##NM_001010883|FAM102B|284611|family with sequence similarity 102, member B##BC140863|FAM102B|284611|family with sequence similarity 102, member B##BC140865|FAM102B|284611|family with sequence similarity 102, member B##NM_001143987|NBPF6|653149|neuroblastoma breakpoint family, member 6##NM_001143988|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##BC125161|NBPF6|653149|neuroblastoma breakpoint family, member 6##BC125162|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK057395|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK316438|NBPF4|148545|neuroblastoma breakpoint family, member 4##AK302318|NBPF4|148545|neuroblastoma breakpoint family, member 4##NM_001143989|NBPF4|148545|neuroblastoma breakpoint family, member 4##BC088366|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_001102592|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##BC012198|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK311542|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK310152|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##AK055087|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_144584|HENMT1|113802|HEN1 methyltransferase homolog 1 (Arabidopsis)##NM_018061|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC040127|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC053838|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC034581|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC007757|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC024275|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC009453|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC016296|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##AL833950|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##AK001192|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC130346|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC132963|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC144243|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC107801|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	0.08797	
chr1	31252343	31252524	reg1001943.p1	4.861	+	TSC_hg19_v1_chr1_-_31230697 NM_006762	-21743	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	-21801	-	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	-56001	-	TSC_hg19_v1_chr1_-_31345363 AL049426	92965	-	AB385258 AF248634 NM_014654 TSC_hg19_v1_chr1_-_31381606	129115	-	TSC_hg19_v1_chr1_-_31538543 BC013398 D43951 AK291779 AK300457 AF315592 AK096476 AK222605	286084	-	NM_006762|LAPTM5|7805|lysosomal protein transmembrane 5##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##AL049426|SDC3|9672|syndecan 3##AF248634|SDC3|9672|syndecan 3##NM_014654|SDC3|9672|syndecan 3##BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)##D43951|PUM1|9698|pumilio homolog 1 (Drosophila)##AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)##AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)##AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)##AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)##AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)	0.0	
chr1	32827669	32827849	reg1028050.p1	4.861	+	TSC_hg19_v1_chr1_-_32801835 AB528178 CU688192 AM393505 DQ893237 DQ896567 X70326 AL713653 AY007131 BC007904 BC066915 NM_023009	-26028	-	TSC_hg19_v1_chr1_+_32757740 BC000301 AK299792 AY627042 AB451297 AB451430 AB463736 CR541717 CU674144 DQ891398 DQ894577	-70019	+	D50405 NM_004964 TSC_hg19_v1_chr1_+_32757707	-70051	+	BC035354 NM_052841	70	+	NM_001167676	84	-	CR457252 TSC_hg19_v1_chr1_-_32860030 BC010573 CR749228 BX641056 AK300231 BC026322 AK297604 AK300306 AK001138 AK225717 AK293454 BC028381 AK021440 AK297352 AK225026 AK304477 AK316172 NM_001143888 NM_001143889 NM_001143890 NM_018045	32278	-	AM393505|MARCKSL1|65108|MARCKS-like 1##DQ893237|MARCKSL1|65108|MARCKS-like 1##DQ896567|MARCKSL1|65108|MARCKS-like 1##X70326|MARCKSL1|65108|MARCKS-like 1##AL713653|MARCKSL1|65108|MARCKS-like 1##AY007131|MARCKSL1|65108|MARCKS-like 1##BC007904|MARCKSL1|65108|MARCKS-like 1##BC066915|MARCKSL1|65108|MARCKS-like 1##NM_023009|MARCKSL1|65108|MARCKS-like 1##BC000301|HDAC1|3065|histone deacetylase 1##AK299792|HDAC1|3065|histone deacetylase 1##AY627042|HDAC1|3065|histone deacetylase 1##AB451297|HDAC1|3065|histone deacetylase 1##AB451430|HDAC1|3065|histone deacetylase 1##CR541717|HDAC1|3065|histone deacetylase 1##DQ891398|HDAC1|3065|histone deacetylase 1##DQ894577|HDAC1|3065|histone deacetylase 1##D50405|HDAC1|3065|histone deacetylase 1##NM_004964|HDAC1|3065|histone deacetylase 1##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071##CR457252|BSDC1|55108|BSD domain containing 1##BC010573|BSDC1|55108|BSD domain containing 1##CR749228|BSDC1|55108|BSD domain containing 1##BX641056|BSDC1|55108|BSD domain containing 1##AK300231|BSDC1|55108|BSD domain containing 1##BC026322|BSDC1|55108|BSD domain containing 1##AK297604|BSDC1|55108|BSD domain containing 1##AK300306|BSDC1|55108|BSD domain containing 1##AK001138|BSDC1|55108|BSD domain containing 1##AK225717|BSDC1|55108|BSD domain containing 1##AK293454|BSDC1|55108|BSD domain containing 1##BC028381|BSDC1|55108|BSD domain containing 1##AK021440|BSDC1|55108|BSD domain containing 1##AK297352|BSDC1|55108|BSD domain containing 1##AK225026|BSDC1|55108|BSD domain containing 1##AK304477|BSDC1|55108|BSD domain containing 1##AK316172|BSDC1|55108|BSD domain containing 1##NM_001143888|BSDC1|55108|BSD domain containing 1##NM_001143889|BSDC1|55108|BSD domain containing 1##NM_001143890|BSDC1|55108|BSD domain containing 1##NM_018045|BSDC1|55108|BSD domain containing 1	0.42849	CTCF.p2:7:0.428
chr10	107451706	107451824	reg1029717.p1	4.860	+	BC117417 TSC_hg19_v1_chr10_+_106401047	-1050720	+	AB028982 NM_014978	-1050907	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-1338224	+	TSC_hg19_v1_chr10_-_108459000 AK123752	1007294	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	1472611	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	4231444	-	BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.652629	CTCF.p2:-1:0.653
chr10	31996512	31996678	reg1018518.p1	4.860	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-386506	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-388462	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-388638	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	221129	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	221190	-	TSC_hg19_v1_chr10_-_32344938 AB462413	348337	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.0	
chr16	72042606	72042787	reg1025901.p2	4.860	+	AK292293 TSC_hg19_v1_chr16_+_72042642 NM_001361 BC065245	-102	+	AY164485 NM_181536	-8820	-	TSC_hg19_v1_chr16_+_71929438 AK295066 AK301918 AK057902 AK293022 AK297088 AB097052 D79996 BC000430 BC004359 NM_014761 BC000116	-113253	+	NM_001126102 NM_005143 AK314700 BC107587 AK055872 BC017862 BC058031 BC070299 K01763 L29394 BC121124 BC121125 X00637 K00422	45827	+	NM_020995	54428	+	AK308891 BC009646 TSC_hg19_v1_chr16_-_72127507 AK222889 AK000518 NM_017853	84815	-	AK292293|DHODH|1723|dihydroorotate dehydrogenase (quinone)##NM_001361|DHODH|1723|dihydroorotate dehydrogenase (quinone)##BC065245|DHODH|1723|dihydroorotate dehydrogenase (quinone)##AY164485|PKD1L3|342372|polycystic kidney disease 1-like 3##NM_181536|PKD1L3|342372|polycystic kidney disease 1-like 3##AK295066|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK301918|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK057902|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK293022|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK297088|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AB097052|IST1|9798|increased sodium tolerance 1 homolog (yeast)##D79996|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC000430|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC004359|IST1|9798|increased sodium tolerance 1 homolog (yeast)##NM_014761|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC000116|IST1|9798|increased sodium tolerance 1 homolog (yeast)##NM_001126102|HP|3240|haptoglobin##NM_005143|HP|3240|haptoglobin##AK314700|HP|3240|haptoglobin##BC107587|HP|3240|haptoglobin##AK055872|HP|3240|haptoglobin##BC017862|HP|3240|haptoglobin##BC058031|HP|3240|haptoglobin##BC070299|HP|3240|haptoglobin##K01763|HP|3240|haptoglobin##L29394|HP|3240|haptoglobin##BC121124|HP|3240|haptoglobin##BC121125|HP|3240|haptoglobin##X00637|HP|3240|haptoglobin##K00422|HP|3240|haptoglobin##NM_020995|HPR|3250|haptoglobin-related protein##AK308891|TXNL4B|54957|thioredoxin-like 4B##BC009646|TXNL4B|54957|thioredoxin-like 4B##AK222889|TXNL4B|54957|thioredoxin-like 4B##AK000518|TXNL4B|54957|thioredoxin-like 4B##NM_017853|TXNL4B|54957|thioredoxin-like 4B	0.0	
chr22	45659395	45659576	reg1011980.p1	4.860	+	TSC_hg19_v1_chr22_-_45636776 AK094937	-22711	-	CU012960 CU013248 CR456402 TSC_hg19_v1_chr22_-_45636622 NM_001009880	-22869	-	AK315883 AK297058 TSC_hg19_v1_chr22_-_45609417	-50117	-	TSC_hg19_v1_chr22_+_45680833 AF085808 BC069544 NM_001167574 NM_006953 BC108900 CR456608 AB010637 AB528272 CU013204 CU013492	21375	+	TSC_hg19_v1_chr22_+_45704858 AK125027 NM_001104595	45465	+	TSC_hg19_v1_chr22_+_45705838 NM_017911 AK000642	46329	+	AK094937|KIAA0930|23313|KIAA0930##CU012960|KIAA0930|23313|KIAA0930##CU013248|KIAA0930|23313|KIAA0930##CR456402|KIAA0930|23313|KIAA0930##NM_001009880|KIAA0930|23313|KIAA0930##AK315883|KIAA0930|23313|KIAA0930##AK297058|KIAA0930|23313|KIAA0930##AF085808|UPK3A|7380|uroplakin 3A##BC069544|UPK3A|7380|uroplakin 3A##NM_001167574|UPK3A|7380|uroplakin 3A##NM_006953|UPK3A|7380|uroplakin 3A##BC108900|UPK3A|7380|uroplakin 3A##CR456608|UPK3A|7380|uroplakin 3A##AB010637|UPK3A|7380|uroplakin 3A##CU013204|UPK3A|7380|uroplakin 3A##CU013492|UPK3A|7380|uroplakin 3A##AK125027|FAM118A|55007|family with sequence similarity 118, member A##NM_001104595|FAM118A|55007|family with sequence similarity 118, member A##NM_017911|FAM118A|55007|family with sequence similarity 118, member A##AK000642|FAM118A|55007|family with sequence similarity 118, member A	0.0	
chr4	131227870	131227960	reg1026860.p1	4.860	+	NM_001099783	-1210634	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-1213048	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-1213325	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	2842541	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	2845368	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	3895003	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.725692	CTCF.p2:-12:0.726
chr1	200860038	200860156	reg1029627.p1	4.859	+	BC126386 BC126388 AK315339 NM_005298	-17974	+	TSC_hg19_v1_chr1_+_200708732 AK095640 NM_203459	-151426	+	TSC_hg19_v1_chr1_-_200639091 BC041801 NM_001031725	-220989	-	TSC_hg19_v1_chr1_+_200860668 NM_018265 AK001583 AK001763 BC106877	549	+	AK316510 NM_001142569 TSC_hg19_v1_chr1_+_200864027 AK303885	3900	+	AM177180 AB527174 BC137281 BC144557 TSC_hg19_v1_chr1_-_200992598	132457	-	BC126386|GPR25|2848|G protein-coupled receptor 25##BC126388|GPR25|2848|G protein-coupled receptor 25##AK315339|GPR25|2848|G protein-coupled receptor 25##NM_005298|GPR25|2848|G protein-coupled receptor 25##AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##BC041801|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_001031725|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_018265|C1orf106|55765|chromosome 1 open reading frame 106##AK001583|C1orf106|55765|chromosome 1 open reading frame 106##AK001763|C1orf106|55765|chromosome 1 open reading frame 106##BC106877|C1orf106|55765|chromosome 1 open reading frame 106##AK316510|C1orf106|55765|chromosome 1 open reading frame 106##NM_001142569|C1orf106|55765|chromosome 1 open reading frame 106##AK303885|C1orf106|55765|chromosome 1 open reading frame 106##AM177180|KIF21B|23046|kinesin family member 21B##BC137281|KIF21B|23046|kinesin family member 21B##BC144557|KIF21B|23046|kinesin family member 21B	0.182924	
chr13	24444983	24445127	reg1008103.p1	4.859	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	-291523	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-300600	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-437215	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	17961	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	18459	-	NM_001135816 BC142999	18537	+	BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.952418	CTCF.p2:-52:0.952
chr13	58499520	58499603	reg1026205.p1	4.859	+	TSC_hg19_v1_chr13_+_58207858 AK307545	-291665	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	-293614	+	NM_001040429	-293773	+	BC041395 TSC_hg19_v1_chr13_-_60325215	1825583	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	2087759	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	2238420	-	AK307545|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##NM_001040429|PCDH17|27253|protocadherin 17##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	0.028779	
chr7	38414118	38414293	reg1027386.p1	4.859	+	TSC_hg19_v1_chr7_-_38389583 BC035592	-24616	-	Y00482 TSC_hg19_v1_chr7_-_38389512	-24729	-	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	-39001	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	256757	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	256872	-	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	534588	-	BC035592|TRGV5|6978|T cell receptor gamma variable 5##BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)	0.983378	CTCF.p2:8:0.983
chr12	107520756	107520882	reg1027232.p2	4.858	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-33209	-	BC030519 TSC_hg19_v1_chr12_-_107487328 D83702	-33486	-	TSC_hg19_v1_chr12_-_107380925 BC036066 BC068468 AK222558 AY008301 BC050361 BC025984 AK024124 NM_001033050 NM_025198	-139921	-	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	191394	+	AK127295 NM_001017523	453814	+	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	558848	+	NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##BC030519|CRY1|1407|cryptochrome 1 (photolyase-like)##D83702|CRY1|1407|cryptochrome 1 (photolyase-like)##BC036066|MTERFD3|80298|MTERF domain containing 3##BC068468|MTERFD3|80298|MTERF domain containing 3##AK222558|MTERFD3|80298|MTERF domain containing 3##AY008301|MTERFD3|80298|MTERF domain containing 3##BC050361|MTERFD3|80298|MTERF domain containing 3##BC025984|MTERFD3|80298|MTERF domain containing 3##AK024124|MTERFD3|80298|MTERF domain containing 3##NM_001033050|MTERFD3|80298|MTERF domain containing 3##NM_025198|MTERFD3|80298|MTERF domain containing 3##BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)	0.023833	
chr13	45012043	45012141	reg1012244.p1	4.858	+	NM_001243797	-703	-	NM_006022 TSC_hg19_v1_chr13_-_45011118	-1003	-	AK290751 TSC_hg19_v1_chr13_-_45010994	-1098	-	NM_001243798	36344	-	AK091854 AX747223 TSC_hg19_v1_chr13_-_45150467 BC136475 BC136482	138338	-	TSC_hg19_v1_chr13_-_45150604 AB082525 NM_001243799 NM_183422	138558	-	NM_001243797|TSC22D1|8848|TSC22 domain family, member 1##NM_006022|TSC22D1|8848|TSC22 domain family, member 1##AK290751|TSC22D1|8848|TSC22 domain family, member 1##NM_001243798|TSC22D1|8848|TSC22 domain family, member 1##AK091854|TSC22D1|8848|TSC22 domain family, member 1##BC136475|TSC22D1|8848|TSC22 domain family, member 1##BC136482|TSC22D1|8848|TSC22 domain family, member 1##AB082525|TSC22D1|8848|TSC22 domain family, member 1##NM_001243799|TSC22D1|8848|TSC22 domain family, member 1##NM_183422|TSC22D1|8848|TSC22 domain family, member 1	0.0	
chr14	106691586	106691676	reg1031013.p1	4.858	+	U32483 U32956 AF028093 AF028101 AF028111 FN562934 FN562935 FN562936 FN562938 FN562940 FN562941 FN562942 FN562943 FN562969 FN562970 FN562971 FN562972 FN562973 FN562974 FN562976 FN562977 FN562978 FN562979 FN562980 FN562981 FN562982 FN562983 FN564030 AY393108 GU552686 DQ926435 GU552684 GU552688 GU552757 GU552781 GU552690 AY003829 DQ454593 DQ454964 GU552735 FJ839984 FJ873855 FJ873870 FJ873978 FJ874013 HM116198 HM116220 AY003773 AY466515 EF091911 EF175403 EU667600 GQ232801 GQ232810 GQ232870 GQ232884 GQ232937 GQ232940 GU358677 DQ454763 L33029 AB063742 AB063753 AF209885 AJ007326 AY998724 EU099272 AF343408 AM279479 AM279486 AM279587 AM279589 AF103137 AF103300 AF103139 AY640542 HM774290 HM774693 HQ704036 JN111131 JN111139 JN111144 JN111184 JN111186 JN111187 JN111191 JN111197 JN111211 GQ504857 GQ504898 HM774123 HM774196 HM774674 JN110995 AY515008 HM774096 HM774295 HM774432 HM774654 HM774929 JN110663 JN110917 JN110945 JN110948 JN111032 JN111172 L04345 EF177943 FJ385330 FJ385333 FJ385428 HM774077 HM774081 HM774160 HM774325 HM774354 HM774361 HM774528 HM774594 HM774651 HM774665 HM774673 HM774683 HM774694 HM774869 HM774922 HQ704035 AF103230 AF103158 AF103095 AF103101 AF103237 AF103326 DQ926493 DQ097894 DQ097898 EF624133 EF624134 EF624137 EF624139 EU099193 EU146334 EU146384 AF103118 FJ385354 AY393014 EU099058 EU099190 HM995112 AY393019 L12067 L12070 AY393221 AY393225 AY393230 AY393244 AY393245 AY393246 AY393253 AY393261 AY393265 AY393272 AY393339 AY393362 AY393364 AY393494 AY393498 AY393507 AY393512 AY393521 AY393526 AY393527 AY393537 AY393658 AY393663 AY393681 EF177942 EF178122 AY640486 AF022009 AF062293 AF062306 AY685298 AY866751 AY941910 AY941960 DQ100669 DQ100695 DQ100823 DQ101000 DQ523958 GU570214 GU570234 GU570240 GU570244 HM994961 HM995031 HM995113 HM995115 HM995117 HM995118 HM995409 HM995411 HM995412 HM995413 HM995414 HM995415 HM995428 HM995461 HM995728 HM996035 HM996132 HM996228 HM996503 HM996531 HM996549 HQ378367 U64480 AB066989 AB067026 AB363145 AB363159 AY033251 AY033263 AY033264 AY941851 AY941917 DQ065675 DQ065679 DQ065695 DQ926155 DQ926171 DQ926203 DQ926402 DQ926411 DQ926472 DQ926480 DQ926481 DQ926483 DQ926540 DQ926542 DQ926549 EF177954 EF178002 EF178074 EF178082 EU794408 EU794435 FJ195464 FJ195469 FJ195474 FJ385305 FJ385319 FJ385363 FJ385390 FM160411 HQ378352 Z92891 AB063681 AB063682 AB063683 AB063684 AB063688 AB063689 AB063692 AB063693 AB063694 AB063695 AB063696 AB063702 AB063710 AB063718 AB063722 AB063725 AB063737 AB063738 AB063739 AB063746 AB063748 AB063786 AB063788 AB063795 AB063814 AB063816 AB063817 AB063819 AB063820 AB063821 AB063823 AB063825 AB063870 AB063904 AB063923 AB066999 AB067155 AB067156 AB067160 AB067163 AB067165 AB067171 AB067179 AB067302 AB067303 AB067332 AB067397 AF021967 AF021968 AF062199 AF062246 AF115131 AF115132 AF115133 AF115134 AF174092 AF174102 AF174123 AJ239345 AJ293739 AJ293740 AJ413994 AJ414022 AY530314 AY530319 AY971114 DQ065688 DQ100806 DQ926283 DQ926285 DQ926517 GU570230 GU570235 GU570236 GU570237 GU570238 GU570242 HM995881 HQ689758 JN158093 U00500 U00503 U00542 U00589 U64484 U77375 X61647 X91804 Z18832 Z18851 Z46855 DQ535265 DQ535277 DQ535295 DQ535369 DQ535473 EF177949 EF178045 EF178047 EF178059 EF178069 HM995648 HM995649 HM995876 AF026930 AF062147 AF062150 AF062212 AF062265 AF174028 L38435 M28136 X15611 X60504 Z14963 BC073789 BC051319 BC051328 TSC_hg19_v1_chr14_-_106642052 AK301327 AK301389 BC005951 BX640625 BX640626	-49811	-	AF028103 AF028108 Z11951 FJ840130 AF460713 AF460734 DQ454527 DQ454388 DQ454699 GQ232866 DQ454529 GQ232862 GQ232892 GU552777 EF407836 AY003841 DQ454714 GU552715 GU552744 DQ454664 DQ454668 DQ454679 DQ454889 DQ523850 AF209741 FJ385398 FJ873853 GU552716 GU552740 FJ840399 FJ840405 FJ873982 FJ840136 FJ840137 FJ840146 FJ873844 FJ873859 FJ873968 AJ008185 AJ008243 DQ454505 AY003713 AY003823 AY003842 EU433861 AF103214 EF441758 AF209733 AF209739 M18511 EU099088 EU099091 EU099108 EU099125 EU099214 DQ100874 AF103360 AF103031 AF103055 AF103172 AF103027 AY062317 HM773987 JN110484 JN110743 JN110870 JN110880 JN110904 JN111065 FJ385409 FJ385427 GQ504866 HM774017 HM774087 HM774308 HM774638 HM774746 HM774912 HM774921 AF032354 AF103227 AF103255 AF082194 EU146316 EU146375 EU146379 EU146381 EU146388 EU146390 EU146391 AJ271553 AJ300806 DQ926562 L38566 AB066857 HM995144 AF035789 AF035799 AF035798 L26034 AF062296 AF062303 AF471268 DQ454900 DQ524054 HM995097 HM995098 HM995245 HM995265 HM995270 HM995272 HM995274 HM995569 HM995686 HM995688 HM995689 HM995690 HM995691 HM995692 HM995930 HM995937 HM995946 HM996125 HM996208 HM996383 HM996458 DQ322777 DQ840774 DQ840820 DQ840842 DQ840897 AJ278771 AY686927 AY866567 AY998725 DQ100923 DQ100931 DQ926186 DQ926328 DQ926496 EF178079 FJ195531 FJ195532 FJ385300 FJ385301 FJ385374 FJ385399 HM995143 L39128 X79165 AB021509 AB021517 AB021528 AB021540 AB063657 AB063800 AB063845 AB066984 AB067025 AB067128 AB363162 AB363202 AB363206 AB373605 AB373606 AB373610 AB373616 AB373630 AB373634 AF021972 AF035026 AF174091 AF471269 AF471270 AF471271 AF471274 AF471276 AF471277 AF471278 AF471279 AJ249632 AJ401163 AJ401164 AJ556720 AJ579094 AJ579101 AJ579115 AJ579140 AJ579160 AJ579180 AJ579219 AJ579227 AJ579235 AJ579263 AJ579275 AJ579285 AJ627238 AY055479 AY376081 AY971142 D83688 D83689 DQ065634 DQ535287 DQ535290 DQ535292 DQ535322 DQ535337 DQ535365 DQ535372 DQ535396 DQ535403 DQ535404 DQ926160 DQ926428 DQ926446 DQ926474 DQ926484 DQ926537 DQ926556 EF028218 EF178024 FJ195520 FJ195538 FJ385323 GU570304 HM152485 HQ689757 U97245 X62954 X62960 X87453 X99364 Y12699 Z18319 Z18322 Z18323 Z75557 Z98737 Z98738 Z98739 Z98740 AJ401161 M34023 L14818 X56523 X56524 AF431053 AF431055 Z14169 AY505570 X81723 X81743 Z14216 Z80843 L29153 L29154 Z14960 M34032 BC065820 BC014667 TSC_hg19_v1_chr14_-_106610847 AK123981 AK301228 AK130434 AK289373	-81036	-	GU552766 DQ454945 DQ454680 DQ454800 DQ100736 HQ392877 AY062313 JN110910 JN111168 L03821 L04324 FJ385334 FJ385335 HM774019 HM774079 HM774175 HM774429 HM774436 HM774460 HM774566 HM774691 HM774780 HM774984 AF165105 AY062308 DQ100831 AJ300807 AB063700 AY423173 AY062309 DQ100870 GU570344 HM994897 HM994907 HM994915 HM995019 HM995419 HM995424 HM995733 HM995761 HM995921 HM995935 HM995953 HM996087 HM996247 HM996409 DQ840731 DQ840896 AB374202 AM279603 AY866783 DQ431491 EF178033 FJ385392 GU570335 AB021538 AB063673 AB066975 AB067002 AB067017 AB067076 AB067261 AB363102 AB363150 AF062210 AF098364 AF174056 AF174100 AF174120 AF301484 AF455549 AF471257 AF471259 AF471261 AF471262 AF471264 AF471363 AF471478 AF471487 AF471497 AJ007956 AJ389180 AJ399809 AJ413989 AJ555276 AJ556639 AJ579273 AM040537 AY268370 AY466509 AY685302 AY685304 AY921574 AY921575 AY927662 AY941906 D83675 DQ065617 DQ065728 DQ535267 DQ535281 DQ535298 DQ535334 DQ535408 DQ535485 DQ926436 DQ926504 DQ926507 DQ926513 DQ926550 EF178020 GU570303 GU570338 GU570343 GU570348 L33984 S65535 Z33898 AY670714 HM995884 AF062141 L03683 L38431 X65894 X81740 M18515 BC053984 TSC_hg19_v1_chr14_-_106586668	-105130	-	AY885219 X61021 Z14181 S55735 AY003795 DQ454455 DQ454409 AF460804 AF460662 AF460801 DQ454397 DQ100714 DQ523908 GQ232944 GQ232956 GQ232797 DQ840786 GQ232980 DQ454544 AY003853 DQ454479 DQ454535 DQ454792 DQ454854 DQ523849 DQ523895 GQ232770 GQ232955 DQ454396 DQ454585 DQ454631 DQ454654 DQ454956 DQ523905 GQ232836 AY003731 AY003716 AY003784 DQ454389 DQ454410 DQ454413 DQ454468 DQ454520 DQ454542 DQ454636 DQ454958 DQ454970 DQ523897 GQ232858 DQ454415 DQ454603 DQ454652 DQ454660 DQ454905 DQ454967 DQ454973 DQ523880 FJ694878 GQ232876 EF407825 EF407842 FJ840131 Z11947 FJ840333 FJ840335 FJ873821 FJ873823 FJ873828 FJ873833 FJ873836 FJ873860 FJ873862 FJ873874 FJ873877 FJ873883 FJ873914 FJ873942 FJ873962 FJ873970 FJ873987 FJ873990 FJ873992 FJ874005 FJ874027 FJ874036 FJ874038 FJ874063 FJ874086 AJ008226 DQ001066 AJ487489 EF091900 EF091901 EF091902 EF175385 EF407838 EF407845 EU814964 FJ694872 JF810262 JF810268 AY393066 AF209735 EU099104 EU099065 EU099101 EU099149 EU099151 EU099184 HM774293 EU099140 EU099070 EU099084 AF158380 EU099130 EU099206 EU099239 EU099243 EU099258 DQ118258 EU090051 DQ524167 EU099262 AF343414 DQ097900 EF555587 EU619977 AF103077 AF103170 AM279610 HM774182 U63212 HM995125 AF035793 AF103329 AF103330 AF103112 AF103182 AJ239379 EF555588 TSC_hg19_v1_chr14_-_106691939 HM774712 HM774761 JN110464 JN110738 JN110826 JN110827 JN110839 JN110903 JN110961 JN110967 JN111019 JN111020 JN111030 JN111035 JN111063 JN111100 JN111115 JN111156 L04329 GQ504855 GQ504939 GQ504944 GQ504967 HM774165 HM774369 HM774525 HM774602 HM774676 HM774690 HM774752 HM774770 HM774773 HM774906 HM775035 HM775044 HQ703986 HQ703987 HQ703995 HQ704026 L26905 L33025 AF103232 JN110697 AF032350 AF032352 AF103105 AJ239387 HM774240 Y14934 Y14935 Y14942 AF103145 EF624220 EU146314 EU146319 EU146378 AB266092 HM996466 DQ100899 AY423192 EF633794 EF633821 HM996470 HM996128 HM995111 AB027443 AF471507 DQ100917 DQ431609 U00572 DQ100693 DQ100840 DQ187606 DQ431612 DQ431613 DQ454842 DQ523995 DQ523997 DQ524047 DQ524062 EF633795 EF633796 HM995012 HM995014 HM995015 HM995084 HM995085 HM995086 HM995089 HM995091 HM995099 HM995100 HM995101 HM995102 HM995103 HM995104 HM995105 HM995106 HM995107 HM995108 HM995109 HM995110 HM995146 HM995147 HM995181 HM995188 HM995201 HM995278 HM995279 HM995280 HM995282 HM995284 HM995285 HM995292 HM995392 HM995530 HM995634 HM995888 HM995892 HM996033 HM996054 HM996072 HM996116 HM996119 HM996127 HM996149 HM996152 HM996173 HM996175 HM996181 HM996217 HM996257 HM996264 HM996267 HM996277 HM996341 HM996536 HM996544 DQ187628 DQ322746 DQ322747 DQ322768 DQ323029 DQ323030 DQ840720 DQ840783 DQ840784 DQ840785 DQ840787 DQ840788 DQ840789 DQ840790 DQ840792 DQ840793 DQ840794 DQ840795 DQ840796 DQ840797 DQ840817 DQ840822 DQ840837 AB453230 AJ245260 AY781807 AY866546 AY866968 AY941949 DQ005279 DQ100697 DQ100798 DQ100815 DQ100893 DQ100898 DQ100901 DQ100925 DQ100947 DQ926257 DQ926305 DQ926590 HQ378339 L19904 U21270 AB063691 AB063759 AB063908 AB066881 AB066972 AB066974 AB066976 AB066979 AB067033 AB363081 AB453231 AF044445 AF052523 AF062162 AF408719 AF455550 AF460967 AF471211 AJ001171 AJ243108 AJ271554 AJ389178 AJ389193 AJ519292 AJ555251 AJ555252 AY033254 AY033285 AY055481 AY466506 AY553643 AY553648 AY577302 AY685252 AY685253 AY846272 AY866763 AY866786 D83686 DQ005290 DQ065626 DQ065630 DQ065668 DQ065694 DQ065704 DQ212512 DQ431611 DQ535452 DQ840743 DQ840747 DQ840748 DQ840749 DQ840750 DQ840751 DQ840752 DQ840812 DQ926167 EF177948 EF177958 EF177959 EF633763 EF633764 EF633797 FJ039786 FJ039789 FJ385383 FJ481087 FJ492943 GU570307 HM152488 HM152500 HM152517 HM152520 HQ689728 S73912 U00508 U06787 U64497 U77372 X99354 Z18317 Z18324 L26898 AJ519295 HM995778 HM995962 AJ519313 HM995777 HM995779 HM995832 HM995882 HM995893 HM995902 HM995903 HM995904 HM995905	207	-	AY392910 AY392920 AY392921 AY392925 AY392927 AJ309825 AF062121 AF062163 AF062202 Z14212 AY510104 X61023 X61235 AK098108 BC024289 TSC_hg19_v1_chr14_-_106692204 BX640874 AK027379 AK097359 AK127415 AK128635 AK129812 AK130453 BX640622 L29155	525	-	HM773994 HM773969 HM774039 HM774286 HM774541 L26903 AF471552 AF165112 AF103256 AF103274 AF485481 AY422534 HM995226 AF485479 HM995136 DQ187519 AF471191 AY423174 AY423212 AY487925 AJ239389 FJ195534 AJ239350 EF633792 HM994991 HM994995 HM995120 HM995247 HM995734 HM995857 HM995861 HM995862 HM995956 HM995966 HM996020 HM996043 HM996120 AJ233704 DQ100731 DQ926104 DQ926196 DQ926591 AF021977 AF211206 AF398960 AF408726 AF471175 AF471198 AF471363 AF471489 AJ556667 AJ556739 DQ535353 DQ926403 DQ926454 EF177946 FN563816 GU570347 HQ689731 U64478 Z96957 AF283800 AJ519282 M86598 M86599 TSC_hg19_v1_chr14_-_106714902	23117	-	BC073789|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC051328|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK301327|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301389|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC005951|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640625|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BX640626|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC065820|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC014667|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130434|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK098108|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK027379|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097359|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128635|IGHD|3495|immunoglobulin heavy constant delta##AK129812|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130453|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640622|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.0	
chr14	62197600	62197724	reg1035368.p1	4.858	+	FJ790247 NM_001243084	-33323	+	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	-35472	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-409135	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	31457	+	AJ617628 NM_031914 BC117363 BC143598 HQ258344 AB102949	264976	+	TSC_hg19_v1_chr14_+_62584125 BX248751	386496	+	FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##AJ617628|SYT16|83851|synaptotagmin XVI##NM_031914|SYT16|83851|synaptotagmin XVI##BC117363|SYT16|83851|synaptotagmin XVI##BC143598|SYT16|83851|synaptotagmin XVI##HQ258344|SYT16|83851|synaptotagmin XVI##AB102949|SYT16|83851|synaptotagmin XVI##BX248751|FLJ43390|646113|uncharacterized LOC646113	0.982555	CTCF.p2:13:0.983
chr1	46908400	46908580	reg1020143.p2	4.858	+	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	-48514	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-102047	+	TSC_hg19_v1_chr1_+_46769369 D28439 BC093060 BC001934 NM_006004 BC015177 BC107703 BC001426 AK311967 Y00764 M36647 BT007070	-139103	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	64182	+	NM_001097611	108396	-	BC002755 AB000409 AK096423 TSC_hg19_v1_chr1_-_47069922	161414	-	NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##D28439|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC093060|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001934|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006004|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC015177|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC107703|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001426|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##AK311967|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##Y00764|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##M36647|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BT007070|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001097611|KNCN|148930|kinocilin##BC002755|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AB000409|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK096423|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1	0.721035	CTCF.p2:-1:0.721
chr2	110556150	110556295	reg1031076.p2	4.858	+	NM_005054 U64675	-4257	+	AL136868 NM_001037866 NM_001123363 NM_032260	-5888	+	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	-184277	+	BC094740 NM_001205288 NM_033514	99786	+	U17077 AB590150 DQ892870 DQ896118 TSC_hg19_v1_chr2_-_110873397 BC003179	317183	-	TSC_hg19_v1_chr2_-_110873536 AK311353	317343	-	NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##U17077|MALL|7851|mal, T-cell differentiation protein-like##DQ892870|MALL|7851|mal, T-cell differentiation protein-like##DQ896118|MALL|7851|mal, T-cell differentiation protein-like##BC003179|MALL|7851|mal, T-cell differentiation protein-like##AK311353|MALL|7851|mal, T-cell differentiation protein-like	0.578776	CTCF.p2:-14:0.579
chr22	39662592	39662764	reg1025424.p1	4.858	+	NM_002608 X02811 TSC_hg19_v1_chr22_-_39640988 M12783	-21671	-	CR541807 CU013138 CU013426 AB590092 TSC_hg19_v1_chr22_-_39639984 CR456538 X02744	-22653	-	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	-25769	-	BC014017 BC013674 BC013861 BC015032 BC015767 BC088373 BC063662 BC071666 CR456566 BC006483 BC012146 BC012786 TSC_hg19_v1_chr22_-_39715629 AK092695 AK297711 AK315693 AX747675 BC008492 BC107711 D28415 NM_000967 NM_001033853	52961	-	TSC_hg19_v1_chr22_+_39745981 NM_004711 NM_145731 BC000731 AK295863 CR456590 AK289507 AB209372 CU013190 CU013478 AB587338 AJ002304 AJ002305 BT007135 CU674372	83227	+	AJ002303 NM_145738	97496	+	NM_002608|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02811|PDGFB|5155|platelet-derived growth factor beta polypeptide##M12783|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR541807|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013138|PDGFB|5155|platelet-derived growth factor beta polypeptide##CU013426|PDGFB|5155|platelet-derived growth factor beta polypeptide##CR456538|PDGFB|5155|platelet-derived growth factor beta polypeptide##X02744|PDGFB|5155|platelet-derived growth factor beta polypeptide##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide##BC014017|RPL3|6122|ribosomal protein L3##BC013674|RPL3|6122|ribosomal protein L3##BC013861|RPL3|6122|ribosomal protein L3##BC015032|RPL3|6122|ribosomal protein L3##BC015767|RPL3|6122|ribosomal protein L3##BC088373|RPL3|6122|ribosomal protein L3##BC063662|RPL3|6122|ribosomal protein L3##BC071666|RPL3|6122|ribosomal protein L3##CR456566|RPL3|6122|ribosomal protein L3##BC006483|RPL3|6122|ribosomal protein L3##BC012146|RPL3|6122|ribosomal protein L3##BC012786|RPL3|6122|ribosomal protein L3##AK092695|RPL3|6122|ribosomal protein L3##AK297711|RPL3|6122|ribosomal protein L3##AK315693|RPL3|6122|ribosomal protein L3##BC008492|RPL3|6122|ribosomal protein L3##BC107711|RPL3|6122|ribosomal protein L3##NM_000967|RPL3|6122|ribosomal protein L3##NM_001033853|RPL3|6122|ribosomal protein L3##NM_004711|SYNGR1|9145|synaptogyrin 1##NM_145731|SYNGR1|9145|synaptogyrin 1##BC000731|SYNGR1|9145|synaptogyrin 1##AK295863|SYNGR1|9145|synaptogyrin 1##CR456590|SYNGR1|9145|synaptogyrin 1##AK289507|SYNGR1|9145|synaptogyrin 1##CU013190|SYNGR1|9145|synaptogyrin 1##CU013478|SYNGR1|9145|synaptogyrin 1##AJ002304|SYNGR1|9145|synaptogyrin 1##AJ002305|SYNGR1|9145|synaptogyrin 1##BT007135|SYNGR1|9145|synaptogyrin 1##AJ002303|SYNGR1|9145|synaptogyrin 1##NM_145738|SYNGR1|9145|synaptogyrin 1	0.0	
chr5	88028102	88028234	reg1028888.p2	4.858	+	TSC_hg19_v1_chr5_-_87980643 AK125167	-47461	-	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	-59023	-	BC047059 TSC_hg19_v1_chr5_+_87564842	-463319	+	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	91505	-	TSC_hg19_v1_chr5_-_88179002 AK312472 L08895 AK307883 BC026341	150838	-	TSC_hg19_v1_chr5_-_88179279 NM_001193350 NM_002397	151117	-	AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##BC047059|LOC100505894|100505894|uncharacterized LOC100505894##EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C##AK312472|MEF2C|4208|myocyte enhancer factor 2C##L08895|MEF2C|4208|myocyte enhancer factor 2C##AK307883|MEF2C|4208|myocyte enhancer factor 2C##BC026341|MEF2C|4208|myocyte enhancer factor 2C##NM_001193350|MEF2C|4208|myocyte enhancer factor 2C##NM_002397|MEF2C|4208|myocyte enhancer factor 2C	0.0	
chr8	137506979	137507160	reg1024074.p2	4.858	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-1036868	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-1037411	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1781795	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2002037	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2419175	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3208213	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.0	
chr17	12299206	12299338	reg1028813.p1	4.857	+	TSC_hg19_v1_chr17_+_11924150 BC036032 NM_003010 BC060764 AK131544 AK313053 U17743 AK294923 L36870 BC050386 AB590846 BT019676 CR536564	-375091	+	AK092656 AX747657 NM_144680 TSC_hg19_v1_chr17_-_11900782 AY491053 AK127908	-398519	-	NM_004662 X99947	-513052	+	NM_001146312 NM_153604 TSC_hg19_v1_chr17_+_12569210 AY764180	269937	+	AK128608 TSC_hg19_v1_chr17_+_12569334 AK292885	270049	+	TSC_hg19_v1_chr17_+_12569389 BC126307 BC143391 AF532596	270162	+	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4##NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4##U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4##L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4##CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK092656|ZNF18|7566|zinc finger protein 18##NM_144680|ZNF18|7566|zinc finger protein 18##AY491053|ZNF18|7566|zinc finger protein 18##AK127908|ZNF18|7566|zinc finger protein 18##NM_004662|DNAH9|1770|dynein, axonemal, heavy chain 9##X99947|DNAH9|1770|dynein, axonemal, heavy chain 9##NM_001146312|MYOCD|93649|myocardin##NM_153604|MYOCD|93649|myocardin##AY764180|MYOCD|93649|myocardin##AK128608|MYOCD|93649|myocardin##AK292885|MYOCD|93649|myocardin##BC126307|MYOCD|93649|myocardin##BC143391|MYOCD|93649|myocardin##AF532596|MYOCD|93649|myocardin	0.0	
chr20	42339231	42339411	reg1030004.p1	4.857	+	TSC_hg19_v1_chr20_+_42295753 AK303249 AK314791 BC053555 X13293 AB528519 AK223482 DQ893522 DQ895945	-43486	+	NM_002466 TSC_hg19_v1_chr20_+_42295720 BC007585	-43600	+	TSC_hg19_v1_chr20_+_42219576 NM_016004 BC021086 BC039831 AK301915 AF151811 AK001436	-119709	+	BC040049 AK058060 NM_001008901 NM_176791	16282	-	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	204166	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	205472	+	AK303249|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK314791|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC053555|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##X13293|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK223482|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ893522|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ895945|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_002466|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC007585|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_016004|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##BC039831|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##AK301915|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##AF151811|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##AK001436|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##BC040049|GTSF1L|149699|gametocyte specific factor 1-like##AK058060|GTSF1L|149699|gametocyte specific factor 1-like##NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like##NM_176791|GTSF1L|149699|gametocyte specific factor 1-like##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2	0.013979	
chr22	40446357	40446503	reg1026653.p1	4.857	+	TSC_hg19_v1_chr22_+_40441403 BC028626	-4998	+	TSC_hg19_v1_chr22_+_40440774 NM_001024843	-5521	+	TSC_hg19_v1_chr22_+_40390935 BC031099 NM_138435	-55486	+	TSC_hg19_v1_chr22_+_40573938 NM_001162501 NM_015088 AK296590 AK294519 AB029016	127569	+	TSC_hg19_v1_chr22_+_40742532 NM_000026 NM_001123378 AF067853 AF067854 AK293722 CR456368 AK298187 AK291091 AK300705 BC000253 BC018881 AK225042 CU674104 AB462938 CU012935 CU013223 DQ893326 DQ896642 X65867 S60710	296102	+	TSC_hg19_v1_chr22_+_40766609 NM_015705 AK309400	320159	+	BC028626|TNRC6B|23112|trinucleotide repeat containing 6B##NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B##BC031099|FAM83F|113828|family with sequence similarity 83, member F##NM_138435|FAM83F|113828|family with sequence similarity 83, member F##NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B##NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B##AK296590|TNRC6B|23112|trinucleotide repeat containing 6B##AK294519|TNRC6B|23112|trinucleotide repeat containing 6B##AB029016|TNRC6B|23112|trinucleotide repeat containing 6B##NM_000026|ADSL|158|adenylosuccinate lyase##NM_001123378|ADSL|158|adenylosuccinate lyase##AF067853|ADSL|158|adenylosuccinate lyase##AF067854|ADSL|158|adenylosuccinate lyase##CR456368|ADSL|158|adenylosuccinate lyase##AK298187|ADSL|158|adenylosuccinate lyase##AK291091|ADSL|158|adenylosuccinate lyase##AK300705|ADSL|158|adenylosuccinate lyase##BC000253|ADSL|158|adenylosuccinate lyase##BC018881|ADSL|158|adenylosuccinate lyase##AK225042|ADSL|158|adenylosuccinate lyase##CU012935|ADSL|158|adenylosuccinate lyase##CU013223|ADSL|158|adenylosuccinate lyase##DQ893326|ADSL|158|adenylosuccinate lyase##DQ896642|ADSL|158|adenylosuccinate lyase##X65867|ADSL|158|adenylosuccinate lyase##S60710|ADSL|158|adenylosuccinate lyase##NM_015705|SGSM3|27352|small G protein signaling modulator 3##AK309400|SGSM3|27352|small G protein signaling modulator 3	0.0	
chr11	14811592	14811686	reg1023741.p1	4.856	+	TSC_hg19_v1_chr11_+_14665399 BC146828 BC150322 X95520 AB209326	-145855	+	TSC_hg19_v1_chr11_+_14665349 BC136565 BC136566 BC144248	-146274	+	TSC_hg19_v1_chr11_+_14665310 AY459346	-146318	+	BC052580 BC111070 TSC_hg19_v1_chr11_-_14913218 AK312019 BC084557	101595	-	AY323817 NM_024514 BC104907 BC104909	102134	-	AK054728 TSC_hg19_v1_chr11_+_14926557	114910	+	BC146828|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##BC150322|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##X95520|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##AB209326|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##BC136565|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##BC136566|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##BC144248|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##AY459346|PDE3B|5140|phosphodiesterase 3B, cGMP-inhibited##BC052580|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC111070|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##AY323817|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##NM_024514|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104907|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##BC104909|CYP2R1|120227|cytochrome P450, family 2, subfamily R, polypeptide 1##AK054728|CALCB|797|calcitonin-related polypeptide beta	0.72776	CTCF.p2:-16:0.728
chr11	64110052	64110145	reg1026936.p2	4.856	+	TSC_hg19_v1_chr11_+_64107692 BC151218 BC151222 NM_032251 AK090436 BC140822 BC140824 BC141866	-2396	+	TSC_hg19_v1_chr11_+_64085676 AF124993 AF110731 BC113723 BC113725 BC143849 BC171733 AF112212 AF242525 AF231705 CR457203 HQ258129 AJ249483	-24376	+	BC110983 NM_012094 NM_181651 NM_181652 TSC_hg19_v1_chr11_+_64085600 AF197952	-24519	+	TSC_hg19_v1_chr11_+_64120348 AK126728	10261	+	TSC_hg19_v1_chr11_+_64126642 AK223561 NM_001006944 NM_003942 AJ010119 AK292163 AK313567 BC047896 AK298507 BC028079 CU690526 AF074715	16633	+	AK290791 BC034384 NM_018484 AK129930	213027	+	BC151218|CCDC88B|283234|coiled-coil domain containing 88B##BC151222|CCDC88B|283234|coiled-coil domain containing 88B##NM_032251|CCDC88B|283234|coiled-coil domain containing 88B##AK090436|CCDC88B|283234|coiled-coil domain containing 88B##BC140822|CCDC88B|283234|coiled-coil domain containing 88B##BC140824|CCDC88B|283234|coiled-coil domain containing 88B##BC141866|CCDC88B|283234|coiled-coil domain containing 88B##AF124993|PRDX5|25824|peroxiredoxin 5##AF110731|PRDX5|25824|peroxiredoxin 5##BC113723|PRDX5|25824|peroxiredoxin 5##BC113725|PRDX5|25824|peroxiredoxin 5##BC143849|PRDX5|25824|peroxiredoxin 5##BC171733|PRDX5|25824|peroxiredoxin 5##AF112212|PRDX5|25824|peroxiredoxin 5##AF242525|PRDX5|25824|peroxiredoxin 5##AF231705|PRDX5|25824|peroxiredoxin 5##CR457203|PRDX5|25824|peroxiredoxin 5##HQ258129|PRDX5|25824|peroxiredoxin 5##AJ249483|PRDX5|25824|peroxiredoxin 5##BC110983|PRDX5|25824|peroxiredoxin 5##NM_012094|PRDX5|25824|peroxiredoxin 5##NM_181651|PRDX5|25824|peroxiredoxin 5##NM_181652|PRDX5|25824|peroxiredoxin 5##AF197952|PRDX5|25824|peroxiredoxin 5##AK126728|CCDC88B|283234|coiled-coil domain containing 88B##AK223561|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_001006944|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_003942|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AJ010119|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK292163|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK313567|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC047896|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK298507|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC028079|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AF074715|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK290791|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##BC034384|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##NM_018484|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AK129930|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11	0.11959	
chr18	36370381	36370538	reg1029554.p2	4.856	+	NM_001025087 NM_001025088 NM_001025089 NM_020180	-1224460	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	-1224763	-	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-1961339	-	TSC_hg19_v1_chr18_-_36915657 D28405	545197	-	TSC_hg19_v1_chr18_-_37380279 AK090603	1009809	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	3164740	+	NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK090603|LOC647946|647946|uncharacterized LOC647946##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3	0.445126	CTCF.p2:0:0.445
chr20	50819464	50819590	reg1028702.p1	4.856	+	BC012759 BC041622 NM_018197 NM_022088 NM_199426 NM_199427	-11004	-	BT009760 AB527686 BC021087 AK001744 TSC_hg19_v1_chr20_-_50808313 AK090547 BC031524 AK001596 AK222712	-11272	-	AY170621 AY170622 AY172738 BC111714 AK001666 NM_020436	-400531	-	BX640770 NM_173485	769418	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	770251	+	AK302570 NM_001193421	982294	+	BC012759|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC041622|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_018197|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_022088|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199426|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199427|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BT009760|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC021087|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001744|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK090547|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC031524|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001596|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK222712|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AY170621|SALL4|57167|sal-like 4 (Drosophila)##AY170622|SALL4|57167|sal-like 4 (Drosophila)##AY172738|SALL4|57167|sal-like 4 (Drosophila)##BC111714|SALL4|57167|sal-like 4 (Drosophila)##AK001666|SALL4|57167|sal-like 4 (Drosophila)##NM_020436|SALL4|57167|sal-like 4 (Drosophila)##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2##AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2	0.0	
chr2	27593207	27593324	reg1027720.p1	4.856	+	AF218009 CU674900 TSC_hg19_v1_chr2_-_27593189 BC001870 AB209532 AK300734 BC091502 AF057699 AF112207 AJ011305	-48	-	AJ011306 NM_172195	-347	-	TSC_hg19_v1_chr2_-_27579849 NM_001035521 NM_001521	-13384	-	TSC_hg19_v1_chr2_-_27593312 NM_001034116 NM_015636	52	-	AK298620 D31764 NM_014748 AK293464 TSC_hg19_v1_chr2_+_27593493 AK129689 AK297054 AK222543 AK300144 AK298856 AK295278 AK308487 AK293252 AK307122 AK309640 AK300641 BC021108 BC002524 BC014620 AK298869 BC050590 BC002610 BC032320 BT007167 CR457081	221	+	AK096933 AB075875 NM_001201459 CU690896 EU446569	10057	-	AF218009|EIF2B4|8890|eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa##BC001870|EIF2B4|8890|eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa##AB209532|EIF2B4|8890|eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa##AK300734|EIF2B4|8890|eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa##BC091502|EIF2B4|8890|eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa##AF057699|EIF2B4|8890|eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa##AF112207|EIF2B4|8890|eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa##AJ011305|EIF2B4|8890|eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa##AJ011306|EIF2B4|8890|eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa##NM_172195|EIF2B4|8890|eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa##NM_001035521|GTF3C2|2976|general transcription factor IIIC, polypeptide 2, beta 110kDa##NM_001521|GTF3C2|2976|general transcription factor IIIC, polypeptide 2, beta 110kDa##NM_001034116|EIF2B4|8890|eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa##NM_015636|EIF2B4|8890|eukaryotic translation initiation factor 2B, subunit 4 delta, 67kDa##AK298620|SNX17|9784|sorting nexin 17##D31764|SNX17|9784|sorting nexin 17##NM_014748|SNX17|9784|sorting nexin 17##AK293464|SNX17|9784|sorting nexin 17##AK129689|SNX17|9784|sorting nexin 17##AK297054|SNX17|9784|sorting nexin 17##AK222543|SNX17|9784|sorting nexin 17##AK300144|SNX17|9784|sorting nexin 17##AK298856|SNX17|9784|sorting nexin 17##AK295278|SNX17|9784|sorting nexin 17##AK308487|SNX17|9784|sorting nexin 17##AK293252|SNX17|9784|sorting nexin 17##AK307122|SNX17|9784|sorting nexin 17##AK309640|SNX17|9784|sorting nexin 17##AK300641|SNX17|9784|sorting nexin 17##BC021108|SNX17|9784|sorting nexin 17##BC002524|SNX17|9784|sorting nexin 17##BC014620|SNX17|9784|sorting nexin 17##AK298869|SNX17|9784|sorting nexin 17##BC050590|SNX17|9784|sorting nexin 17##BC002610|SNX17|9784|sorting nexin 17##BC032320|SNX17|9784|sorting nexin 17##BT007167|SNX17|9784|sorting nexin 17##CR457081|SNX17|9784|sorting nexin 17##AK096933|ZNF513|130557|zinc finger protein 513##AB075875|ZNF513|130557|zinc finger protein 513##NM_001201459|ZNF513|130557|zinc finger protein 513##EU446569|ZNF513|130557|zinc finger protein 513	0.0	
chr5	171743020	171743155	reg1027390.p1	4.856	+	NM_152277 TSC_hg19_v1_chr5_-_171710808	-32272	-	BC019910 TSC_hg19_v1_chr5_-_171710765 AK313274	-32383	-	NM_001171183	-121912	+	AB430862 DQ109556 BC038561 TSC_hg19_v1_chr5_-_171881387	138284	-	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	138416	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	325166	+	NM_152277|UBTD2|92181|ubiquitin domain containing 2##BC019910|UBTD2|92181|ubiquitin domain containing 2##AK313274|UBTD2|92181|ubiquitin domain containing 2##NM_001171183|EFCAB9|285588|EF-hand calcium binding domain 9##AB430862|SH3PXD2B|285590|SH3 and PX domains 2B##DQ109556|SH3PXD2B|285590|SH3 and PX domains 2B##BC038561|SH3PXD2B|285590|SH3 and PX domains 2B##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)	0.0	
chr7	30323752	30323931	reg1019506.p1	4.856	+	TSC_hg19_v1_chr7_+_30174621 NM_152793 AK096533 AL834391 AK098769 AB528783 AK294982	-149259	+	TSC_hg19_v1_chr7_+_30068250 BC002838 AF308300 AF380162 DQ893498 DQ896458 CU678236	-255550	+	TSC_hg19_v1_chr7_+_30068010 NM_001197026 NM_001197027 NM_032639 AK294857 BC053990 AK023180	-255840	+	AF513707 NM_147128	81	+	TSC_hg19_v1_chr7_+_30324515 AF527533	708	+	TSC_hg19_v1_chr7_+_30324634 AY054122	815	+	NM_152793|C7orf41|222166|chromosome 7 open reading frame 41##AK096533|C7orf41|222166|chromosome 7 open reading frame 41##AL834391|C7orf41|222166|chromosome 7 open reading frame 41##AK098769|C7orf41|222166|chromosome 7 open reading frame 41##AK294982|C7orf41|222166|chromosome 7 open reading frame 41##BC002838|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF308300|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF380162|PLEKHA8P1|51054|pleckstrin homology domain containing, family A member 8 pseudogene 1##DQ893498|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##DQ896458|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197026|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197027|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_032639|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK294857|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##BC053990|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK023180|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF513707|ZNRF2|223082|zinc and ring finger 2##NM_147128|ZNRF2|223082|zinc and ring finger 2##AF527533|ZNRF2|223082|zinc and ring finger 2##AY054122|ZNRF2|223082|zinc and ring finger 2	0.0	
chr13	20702870	20702957	reg1025767.p4	4.855	+	TSC_hg19_v1_chr13_+_20532911 AJ224901 BX647944 NM_001190965	-169948	+	TSC_hg19_v1_chr13_+_20532881 AK226118 AK289741	-170029	+	TSC_hg19_v1_chr13_+_20532834 BC036372 NM_003453 NM_197968 AL136621 NM_001190964 Y13472	-170096	+	NM_021954	32269	-	BC017048 BC071703 TSC_hg19_v1_chr13_-_20767078 AK225966	64145	-	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	64198	-	AJ224901|ZMYM2|7750|zinc finger, MYM-type 2##BX647944|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190965|ZMYM2|7750|zinc finger, MYM-type 2##AK226118|ZMYM2|7750|zinc finger, MYM-type 2##AK289741|ZMYM2|7750|zinc finger, MYM-type 2##BC036372|ZMYM2|7750|zinc finger, MYM-type 2##NM_003453|ZMYM2|7750|zinc finger, MYM-type 2##NM_197968|ZMYM2|7750|zinc finger, MYM-type 2##AL136621|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190964|ZMYM2|7750|zinc finger, MYM-type 2##Y13472|ZMYM2|7750|zinc finger, MYM-type 2##NM_021954|GJA3|2700|gap junction protein, alpha 3, 46kDa##BC017048|GJB2|2706|gap junction protein, beta 2, 26kDa##BC071703|GJB2|2706|gap junction protein, beta 2, 26kDa##AK225966|GJB2|2706|gap junction protein, beta 2, 26kDa##AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa	0.228931	CTCF.p2:3:0.229
chr13	40357286	40357421	reg1030250.p1	4.855	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-127492	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-179991	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-180026	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	883359	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	987939	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	987979	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.274277	CTCF.p2:8:0.274
chr14	23113296	23113396	reg1026552.p1	4.855	+	TSC_hg19_v1_chr14_+_23067208 AK022878 NM_022060 AX721056 BC024779 AK298127 AK301315 AK293198	-46157	+	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	-55212	-	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	-55260	-	BC112331 NM_005015 TSC_hg19_v1_chr14_+_23235896 AK294849 AK298249 BC001669 X80695 BX248295 BX248001	122499	+	TSC_hg19_v1_chr14_-_23284568 AK025377	171233	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	171286	-	AK022878|ABHD4|63874|abhydrolase domain containing 4##NM_022060|ABHD4|63874|abhydrolase domain containing 4##BC024779|ABHD4|63874|abhydrolase domain containing 4##AK298127|ABHD4|63874|abhydrolase domain containing 4##AK301315|ABHD4|63874|abhydrolase domain containing 4##AK293198|ABHD4|63874|abhydrolase domain containing 4##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC112331|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##NM_005015|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK294849|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK298249|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BC001669|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##X80695|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248295|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248001|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK025377|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	0.0	
chr20	19037698	19037800	reg1030474.p2	4.855	+	NM_001242671	-226911	-	AF418568 AF418570 AX721297 NM_178483 AK130970 AY248902 BC105121 BC112024	-243351	+	TSC_hg19_v1_chr20_+_18568661 NM_080820 BC045167 AK074304 BC100923 BC100924 BC100925 BC100926 AK291440 AF332356 CU692252	-469099	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	155536	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	155704	+	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	829394	+	NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AF418568|C20orf79|140856|chromosome 20 open reading frame 79##AF418570|C20orf79|140856|chromosome 20 open reading frame 79##NM_178483|C20orf79|140856|chromosome 20 open reading frame 79##AK130970|C20orf79|140856|chromosome 20 open reading frame 79##AY248902|C20orf79|140856|chromosome 20 open reading frame 79##BC105121|C20orf79|140856|chromosome 20 open reading frame 79##BC112024|C20orf79|140856|chromosome 20 open reading frame 79##NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2	0.807485	CTCF.p2:16:0.807
chr8	28491369	28491474	reg1028873.p1	4.855	+	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	-139656	+	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	-143642	-	AK002050 AK023418 NM_018660 AB057659 AB073627	-247460	-	TSC_hg19_v1_chr8_+_28559032 AB011091	67654	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	67729	+	TSC_hg19_v1_chr8_-_28747454 BC016687 AK225072 AK304525 AK298468 NM_001172562 BC025267 AK300593 AK295977 AK001733 AK225530	256039	-	NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##AB011091|EXTL3|2137|exostoses (multiple)-like 3##AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3##BC016687|INTS9|55756|integrator complex subunit 9##AK225072|INTS9|55756|integrator complex subunit 9##AK304525|INTS9|55756|integrator complex subunit 9##AK298468|INTS9|55756|integrator complex subunit 9##NM_001172562|INTS9|55756|integrator complex subunit 9##BC025267|INTS9|55756|integrator complex subunit 9##AK300593|INTS9|55756|integrator complex subunit 9##AK295977|INTS9|55756|integrator complex subunit 9##AK001733|INTS9|55756|integrator complex subunit 9##AK225530|INTS9|55756|integrator complex subunit 9	0.623386	CTCF.p2:-8:0.612
chr9	139686393	139686505	reg1019939.p2	4.855	+	TSC_hg19_v1_chr9_+_139685818 CU675821	-615	+	TSC_hg19_v1_chr9_+_139685795 NM_032928 BC007834	-662	+	BC093893 BC093895 AY358618 NM_203347	-27488	-	NM_001039374 BC064582 BC137317 BC137318	4352	+	TSC_hg19_v1_chr9_+_139702376 NM_001173988 NM_001173989 NM_024718	15919	+	TSC_hg19_v1_chr9_+_139702390 GQ169126	15942	+	NM_032928|TMEM141|85014|transmembrane protein 141##BC007834|TMEM141|85014|transmembrane protein 141##BC093893|LCN15|389812|lipocalin 15##BC093895|LCN15|389812|lipocalin 15##AY358618|LCN15|389812|lipocalin 15##NM_203347|LCN15|389812|lipocalin 15##NM_001039374|KIAA1984|84960|KIAA1984##BC064582|KIAA1984|84960|KIAA1984##BC137317|KIAA1984|84960|KIAA1984##BC137318|KIAA1984|84960|KIAA1984##NM_001173988|C9orf86|55684|chromosome 9 open reading frame 86##NM_001173989|C9orf86|55684|chromosome 9 open reading frame 86##NM_024718|C9orf86|55684|chromosome 9 open reading frame 86##GQ169126|C9orf86|55684|chromosome 9 open reading frame 86	0.645489	CTCF.p2:21:0.645
chrX	16901180	16901360	reg1007070.p1	4.855	+	TSC_hg19_v1_chrX_-_16888462 NM_002893	-12773	-	TSC_hg19_v1_chrX_-_16888456 X72841	-12819	-	AB463219 CR541701 AK291567 TSC_hg19_v1_chrX_-_16888381 BC114500 BC114501 U35143	-12965	-	TSC_hg19_v1_chrX_+_16964847 AF010233 NM_001080975 NM_004726 AF511533 AF512951	63662	+	TSC_hg19_v1_chrX_+_17393357 AK302437	492084	+	TSC_hg19_v1_chrX_+_17393541 AY436752 NM_198270	492272	+	NM_002893|RBBP7|5931|retinoblastoma binding protein 7##X72841|RBBP7|5931|retinoblastoma binding protein 7##CR541701|RBBP7|5931|retinoblastoma binding protein 7##AK291567|RBBP7|5931|retinoblastoma binding protein 7##BC114500|RBBP7|5931|retinoblastoma binding protein 7##BC114501|RBBP7|5931|retinoblastoma binding protein 7##U35143|RBBP7|5931|retinoblastoma binding protein 7##AF010233|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_001080975|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_004726|REPS2|9185|RALBP1 associated Eps domain containing 2##AF511533|REPS2|9185|RALBP1 associated Eps domain containing 2##AF512951|REPS2|9185|RALBP1 associated Eps domain containing 2##AK302437|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AY436752|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_198270|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	0.0	
chr16	70285850	70286006	reg1029074.p2	4.854	+	TSC_hg19_v1_chr16_-_70285844 BC052252 NM_058219 BC039194	-95	-	AF448856 BC039068 NM_173619 AL833339 AK074773 CU687316 BC062573	-77824	+	TSC_hg19_v1_chr16_+_70148247 AK292502 AK302987	-137681	+	BC011451 TSC_hg19_v1_chr16_-_70323364 AK299098	37439	-	TSC_hg19_v1_chr16_-_70323413 AK222824 AK225116 AK307782 D32050 NM_001605	37483	-	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	47148	+	BC052252|EXOSC6|118460|exosome component 6##NM_058219|EXOSC6|118460|exosome component 6##AF448856|CLEC18C|283971|C-type lectin domain family 18, member C##BC039068|CLEC18C|283971|C-type lectin domain family 18, member C##NM_173619|CLEC18C|283971|C-type lectin domain family 18, member C##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##BC062573|CLEC18C|283971|C-type lectin domain family 18, member C##AK292502|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##AK302987|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##BC011451|AARS|16|alanyl-tRNA synthetase##AK299098|AARS|16|alanyl-tRNA synthetase##AK222824|AARS|16|alanyl-tRNA synthetase##AK225116|AARS|16|alanyl-tRNA synthetase##AK307782|AARS|16|alanyl-tRNA synthetase##D32050|AARS|16|alanyl-tRNA synthetase##NM_001605|AARS|16|alanyl-tRNA synthetase##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B	0.0	
chr17	72733991	72734171	reg1006150.p3	4.854	+	TSC_hg19_v1_chr17_+_72733394 AK098068 NM_001006638 NM_001163990 AK298033 AK296172 BC016615	-702	+	NM_001163989 TSC_hg19_v1_chr17_+_72733040 AK303442 AB528695	-1028	+	AF251706 AY303545 AK315165 TSC_hg19_v1_chr17_-_72709081 AK298752 AY358545 AK092757 AX747710 NM_139018 BC028199	-25014	-	TSC_hg19_v1_chr17_+_72744766 NM_004252 AK094467 AK128474 AK026581 BC049220	10679	+	TSC_hg19_v1_chr17_+_72744790 BC003361 AF015926 BC011777 BC053350	10703	+	TSC_hg19_v1_chr17_+_72744800 BC001443	10716	+	AK098068|RAB37|326624|RAB37, member RAS oncogene family##NM_001006638|RAB37|326624|RAB37, member RAS oncogene family##NM_001163990|RAB37|326624|RAB37, member RAS oncogene family##AK296172|RAB37|326624|RAB37, member RAS oncogene family##BC016615|RAB37|326624|RAB37, member RAS oncogene family##NM_001163989|RAB37|326624|RAB37, member RAS oncogene family##AK303442|RAB37|326624|RAB37, member RAS oncogene family##AF251706|CD300LF|146722|CD300 molecule-like family member f##AY303545|CD300LF|146722|CD300 molecule-like family member f##AK315165|CD300LF|146722|CD300 molecule-like family member f##AK298752|CD300LF|146722|CD300 molecule-like family member f##AY358545|CD300LF|146722|CD300 molecule-like family member f##AK092757|CD300LF|146722|CD300 molecule-like family member f##NM_139018|CD300LF|146722|CD300 molecule-like family member f##BC028199|CD300LF|146722|CD300 molecule-like family member f##NM_004252|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK094467|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK128474|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK026581|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC049220|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC003361|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AF015926|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC011777|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC053350|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC001443|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	0.092359	
chr1	97255817	97255906	reg1035259.p1	4.854	+	NM_021190 TSC_hg19_v1_chr1_+_97187343 AK092216 AB051232 AK299755 AK299922 AB209266 AF530580 AF530581 AF176085 AK299897 BC016582 AB051233	-68577	+	AB055763 TSC_hg19_v1_chr1_-_97145197	-110665	-	AK292699 NM_001128142 NM_001199682 NM_015485 TSC_hg19_v1_chr1_+_95699765 AK292665 AK296476 AL050062 BC125142 BC065813 BC010936 BC016307 AB528227 AM392773 AM393257 CR533493	-1556113	+	BC030757 TSC_hg19_v1_chr1_+_97260652	4722	+	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	1130628	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	1130698	-	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2##AK092216|PTBP2|58155|polypyrimidine tract binding protein 2##AB051232|PTBP2|58155|polypyrimidine tract binding protein 2##AK299755|PTBP2|58155|polypyrimidine tract binding protein 2##AK299922|PTBP2|58155|polypyrimidine tract binding protein 2##AB209266|PTBP2|58155|polypyrimidine tract binding protein 2##AF530580|PTBP2|58155|polypyrimidine tract binding protein 2##AF530581|PTBP2|58155|polypyrimidine tract binding protein 2##AF176085|PTBP2|58155|polypyrimidine tract binding protein 2##AK299897|PTBP2|58155|polypyrimidine tract binding protein 2##BC016582|PTBP2|58155|polypyrimidine tract binding protein 2##AB051233|PTBP2|58155|polypyrimidine tract binding protein 2##AK292699|RWDD3|25950|RWD domain containing 3##NM_001128142|RWDD3|25950|RWD domain containing 3##NM_001199682|RWDD3|25950|RWD domain containing 3##NM_015485|RWDD3|25950|RWD domain containing 3##AK292665|RWDD3|25950|RWD domain containing 3##AK296476|RWDD3|25950|RWD domain containing 3##AL050062|RWDD3|25950|RWD domain containing 3##BC125142|RWDD3|25950|RWD domain containing 3##BC065813|RWDD3|25950|RWD domain containing 3##BC010936|RWDD3|25950|RWD domain containing 3##BC016307|RWDD3|25950|RWD domain containing 3##AM392773|RWDD3|25950|RWD domain containing 3##AM393257|RWDD3|25950|RWD domain containing 3##CR533493|RWDD3|25950|RWD domain containing 3##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase	0.0	
chr8	128750065	128750156	reg1025790.p1	4.854	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1620	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1785	+	DQ486513 NM_001159542	-322254	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	56673	+	AB042405 NM_031415	2049023	-	BC003599 TSC_hg19_v1_chr8_-_130951934	2201805	-	AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B	0.258378	CTCF.p2:-11:0.258
chrX	101058568	101058676	reg1029147.p1	4.854	+	BC052628 AB011084 BC012541 BX648494 TSC_hg19_v1_chrX_-_100914836 AK291342 NM_014782 NM_177949	-143783	-	NM_177948	-180272	+	TSC_hg19_v1_chrX_+_100878175 AK291225 NM_016607 NM_177947 BX647802 AF208859 AK222655 AB039669 BC005194 CR933656	-180481	+	AJ277654 AJ277655 AJ277656 AJ277657 AJ277658 NM_032946	53926	-	TSC_hg19_v1_chrX_-_101187001 AK094141 AK296520 NM_001011657	128394	-	NM_080390 AK312138 AF325115	322064	+	BC052628|ARMCX2|9823|armadillo repeat containing, X-linked 2##AB011084|ARMCX2|9823|armadillo repeat containing, X-linked 2##BC012541|ARMCX2|9823|armadillo repeat containing, X-linked 2##BX648494|ARMCX2|9823|armadillo repeat containing, X-linked 2##AK291342|ARMCX2|9823|armadillo repeat containing, X-linked 2##NM_014782|ARMCX2|9823|armadillo repeat containing, X-linked 2##NM_177949|ARMCX2|9823|armadillo repeat containing, X-linked 2##NM_177948|ARMCX3|51566|armadillo repeat containing, X-linked 3##AK291225|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_016607|ARMCX3|51566|armadillo repeat containing, X-linked 3##NM_177947|ARMCX3|51566|armadillo repeat containing, X-linked 3##BX647802|ARMCX3|51566|armadillo repeat containing, X-linked 3##AK222655|ARMCX3|51566|armadillo repeat containing, X-linked 3##AB039669|ARMCX3|51566|armadillo repeat containing, X-linked 3##BC005194|ARMCX3|51566|armadillo repeat containing, X-linked 3##CR933656|ARMCX3|51566|armadillo repeat containing, X-linked 3##AJ277654|NXF5|55998|nuclear RNA export factor 5##AJ277655|NXF5|55998|nuclear RNA export factor 5##AJ277656|NXF5|55998|nuclear RNA export factor 5##AJ277657|NXF5|55998|nuclear RNA export factor 5##AJ277658|NXF5|55998|nuclear RNA export factor 5##NM_032946|NXF5|55998|nuclear RNA export factor 5##AK094141|ZMAT1|84460|zinc finger, matrin-type 1##AK296520|ZMAT1|84460|zinc finger, matrin-type 1##NM_001011657|ZMAT1|84460|zinc finger, matrin-type 1##NM_080390|TCEAL2|140597|transcription elongation factor A (SII)-like 2##AK312138|TCEAL2|140597|transcription elongation factor A (SII)-like 2##AF325115|TCEAL2|140597|transcription elongation factor A (SII)-like 2	0.075789	
chr15	98298463	98298577	reg1030468.p1	4.853	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	-971848	+	NM_001145157	-1421952	+	AK316086 NM_001145156	-1422727	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	205399	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	205431	+	AK097062 AK097062 NM_182562	759090	-	AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B	0.995162	CTCF.p2:30:0.995
chr16	66864865	66864997	reg1029607.p1	4.853	+	TSC_hg19_v1_chr16_-_66864880 U50939 AK307677 AK097680 AK312784 NM_001018159 NM_001018160 NM_003905	-45	-	DQ892741 DQ895987 BC000480 BC013301 TSC_hg19_v1_chr16_-_66864855 AY197612 AK298159 AL136798	-99	-	AK093213 AX747993 NM_001136505	-29409	-	AY075019 NM_005182 BC033865 DQ895264 EU176243	13404	+	AY075020 NM_001014435	13909	+	TSC_hg19_v1_chr16_+_66914417 AK292539 NM_020786 AB037769 BC028030	49513	+	U50939|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK307677|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK097680|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK312784|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##NM_001018159|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##NM_001018160|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##NM_003905|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##DQ892741|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##DQ895987|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##BC000480|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##BC013301|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AY197612|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK298159|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AL136798|NAE1|8883|NEDD8 activating enzyme E1 subunit 1##AK093213|CCDC79|283847|coiled-coil domain containing 79##NM_001136505|CCDC79|283847|coiled-coil domain containing 79##AY075019|CA7|766|carbonic anhydrase VII##NM_005182|CA7|766|carbonic anhydrase VII##BC033865|CA7|766|carbonic anhydrase VII##DQ895264|CA7|766|carbonic anhydrase VII##EU176243|CA7|766|carbonic anhydrase VII##AY075020|CA7|766|carbonic anhydrase VII##NM_001014435|CA7|766|carbonic anhydrase VII##AK292539|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##NM_020786|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##AB037769|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##BC028030|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2	0.996644	CTCF.p2:-8:0.997
chr1	8763462	8763580	reg1023220.p1	4.853	+	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	-279504	-	NM_001080397	-379132	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-677123	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	114071	-	GU170215 NM_001201483	168113	-	BC001810 TSC_hg19_v1_chr1_-_8938710 AK098420 M14328 BC011130	175186	-	AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##GU170215|ENO1|2023|enolase 1, (alpha)##NM_001201483|ENO1|2023|enolase 1, (alpha)##BC001810|ENO1|2023|enolase 1, (alpha)##AK098420|ENO1|2023|enolase 1, (alpha)##M14328|ENO1|2023|enolase 1, (alpha)##BC011130|ENO1|2023|enolase 1, (alpha)	0.141516	
chr18	9073890	9074047	reg1003777.p2	4.853	+	AB384528 TSC_hg19_v1_chr18_+_8718600	-355444	+	AK131528 NM_015210	-356600	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	-464222	+	TSC_hg19_v1_chr18_+_9102620 NM_021074	28654	+	TSC_hg19_v1_chr18_+_9102715 AK312129 BC001632 BC017487 M22538 AK291865 AB590136 BC071689 DQ892593 DQ895813 CR456928	28752	+	TSC_hg19_v1_chr18_+_9136811 NM_001083625 NM_015208 BC070234 AK024808 AY373757 BC057225 AL834204	62823	+	AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165##NM_021074|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK312129|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC001632|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC017487|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##M22538|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK291865|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC071689|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ892593|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ895813|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##CR456928|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##NM_001083625|ANKRD12|23253|ankyrin repeat domain 12##NM_015208|ANKRD12|23253|ankyrin repeat domain 12##BC070234|ANKRD12|23253|ankyrin repeat domain 12##AK024808|ANKRD12|23253|ankyrin repeat domain 12##AY373757|ANKRD12|23253|ankyrin repeat domain 12##BC057225|ANKRD12|23253|ankyrin repeat domain 12##AL834204|ANKRD12|23253|ankyrin repeat domain 12	0.0	
chr7	44645933	44646113	reg1028148.p1	4.853	+	TSC_hg19_v1_chr7_-_44621839 AK290125	-24185	-	TSC_hg19_v1_chr7_-_44621821 AK294122 BC052641 BC053583 NM_182547 AK074557 BC057851	-24196	-	TSC_hg19_v1_chr7_-_44621814 AY191223 AB590072 BC025705 AM393201 AM393715 BX647965 BC035467	-24223	-	NM_001003941 NM_001165036 NM_002541 TSC_hg19_v1_chr7_+_44646167	120	+	TSC_hg19_v1_chr7_+_44646177 AK296400	150	+	TSC_hg19_v1_chr7_+_44646188 BC009580	161	+	AK290125|TMED4|222068|transmembrane emp24 protein transport domain containing 4##AK294122|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BC052641|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BC053583|TMED4|222068|transmembrane emp24 protein transport domain containing 4##NM_182547|TMED4|222068|transmembrane emp24 protein transport domain containing 4##AK074557|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BC057851|TMED4|222068|transmembrane emp24 protein transport domain containing 4##AY191223|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BC025705|TMED4|222068|transmembrane emp24 protein transport domain containing 4##AM393201|TMED4|222068|transmembrane emp24 protein transport domain containing 4##AM393715|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BX647965|TMED4|222068|transmembrane emp24 protein transport domain containing 4##BC035467|TMED4|222068|transmembrane emp24 protein transport domain containing 4##NM_001003941|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##NM_001165036|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##NM_002541|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##AK296400|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC009580|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)	0.0	
chr9	132404432	132404549	reg1013418.p1	4.853	+	CU688098 EU831817 EU831894 BC065913 TSC_hg19_v1_chr9_-_132404419 AK023004 BC001719 AK225618 AK299193 AK000555 AK292807 NM_001202403 NM_017873 NM_177999	-121	-	TSC_hg19_v1_chr9_+_132388461 BC001396 BC033234 AF110776	-16020	+	TSC_hg19_v1_chr9_+_132388441 NM_014064 AK290957 AK292332 AK298840 AK307056 AK313829	-16065	+	BC014645 NM_016307 TSC_hg19_v1_chr9_+_132427927	23433	+	TSC_hg19_v1_chr9_+_132428029 AF061970	23576	+	AB590756 AF027740 AF217965 AF010316 TSC_hg19_v1_chr9_-_132515313 AK311947 BC008280 NM_004878	110826	-	EU831817|ASB6|140459|ankyrin repeat and SOCS box containing 6##EU831894|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC065913|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK023004|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC001719|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK225618|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK299193|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK000555|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK292807|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_001202403|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_017873|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_177999|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC001396|METTL11A|28989|methyltransferase like 11A##BC033234|METTL11A|28989|methyltransferase like 11A##AF110776|METTL11A|28989|methyltransferase like 11A##NM_014064|METTL11A|28989|methyltransferase like 11A##AK290957|METTL11A|28989|methyltransferase like 11A##AK292332|METTL11A|28989|methyltransferase like 11A##AK298840|METTL11A|28989|methyltransferase like 11A##AK307056|METTL11A|28989|methyltransferase like 11A##AK313829|METTL11A|28989|methyltransferase like 11A##BC014645|PRRX2|51450|paired related homeobox 2##NM_016307|PRRX2|51450|paired related homeobox 2##AF061970|PRRX2|51450|paired related homeobox 2##AF027740|PTGES|9536|prostaglandin E synthase##AF217965|PTGES|9536|prostaglandin E synthase##AF010316|PTGES|9536|prostaglandin E synthase##AK311947|PTGES|9536|prostaglandin E synthase##BC008280|PTGES|9536|prostaglandin E synthase##NM_004878|PTGES|9536|prostaglandin E synthase	0.68292	CTCF.p2:14:0.683
chr9	135042214	135042350	reg1030358.p1	4.853	+	AB058760 NM_032536 TSC_hg19_v1_chr9_+_135037469	-4879	+	TSC_hg19_v1_chr9_+_135037083 AY358165	-5191	+	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	-87032	-	TSC_hg19_v1_chr9_-_135230312 AK125448	187948	-	TSC_hg19_v1_chr9_-_135230352 AK307608 BX537849	188066	-	TSC_hg19_v1_chr9_-_135230374 BX538166 NM_015046	188125	-	AB058760|NTNG2|84628|netrin G2##NM_032536|NTNG2|84628|netrin G2##AY358165|NTNG2|84628|netrin G2##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AK125448|SETX|23064|senataxin##AK307608|SETX|23064|senataxin##BX537849|SETX|23064|senataxin##BX538166|SETX|23064|senataxin##NM_015046|SETX|23064|senataxin	0.09748	
chr12	77934008	77934155	reg1038219.p1	4.852	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-474792	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-661298	-	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	-776055	+	NM_014903 AJ488201	291051	+	AK094616 NM_001135805	1323691	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	1324394	+	BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17##NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I	0.798096	CTCF.p2:-6:0.798
chr2	20725055	20725234	reg1029973.p2	4.852	+	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-78312	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-174725	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-198011	-	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	125704	-	AF522369 NM_182828	141279	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	297709	-	AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43	0.240263	CTCF.p2:-22:0.240
chr18	7022422	7022517	reg1025539.p2	4.851	+	NM_001010000 BX648684 AK308259 AK302026	-188004	+	NM_001243517	-511055	+	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	-607554	-	BC144590 NM_005559 X58531	95315	-	NM_001105581	208667	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	544848	+	NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M	1.395338	CTCF.p2:14:0.987	CTCF.p2:-82:0.408
chr19	40170126	40170265	reg1022717.p3	4.851	+	FJ613352 NM_001190441	-23650	+	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	-77010	+	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	-139375	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	24848	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	58444	-	NM_001143832	97038	+	FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##NM_001143832|LEUTX|342900|leucine twenty homeobox	0.0	
chr21	35574370	35574484	reg1027739.p2	4.851	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	-128498	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	-128586	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-286335	-	AF302095 DQ192290 NM_172201 BC112087 BC093892	161919	+	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	173398	+	AY789480 NM_001127670 EU008570	253645	-	AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1	0.0	
chr3	195501942	195502024	reg1026009.p1	4.851	+	NM_001098516	-50886	+	TSC_hg19_v1_chr3_+_195447848 AY358449 AK075138 BC029267 AK027314 BC044243 CU688620 CU692194	-54139	+	TSC_hg19_v1_chr3_+_195447752 NM_152673 AK311504	-54228	+	EF091824 AJ242549 AJ242550 AJ276359 AJ277412 AJ277505 AJ400633 AJ400849 AJ400850 AJ400851 AJ400852 AJ400853 AJ400854 AJ400855 AJ400856 AJ400857 AJ400858 TSC_hg19_v1_chr3_-_195538801 AK307054 NM_004532 NM_018406 NM_138297	36788	-	BC008884 AK225786 BC020389 TSC_hg19_v1_chr3_-_195619679	117582	-	AK131539 NM_001010938	120448	-	NM_001098516|MUC20|200958|mucin 20, cell surface associated##AY358449|MUC20|200958|mucin 20, cell surface associated##AK075138|MUC20|200958|mucin 20, cell surface associated##BC029267|MUC20|200958|mucin 20, cell surface associated##AK027314|MUC20|200958|mucin 20, cell surface associated##BC044243|MUC20|200958|mucin 20, cell surface associated##NM_152673|MUC20|200958|mucin 20, cell surface associated##AK311504|MUC20|200958|mucin 20, cell surface associated##EF091824|MUC4|4585|mucin 4, cell surface associated##AJ242549|MUC4|4585|mucin 4, cell surface associated##AJ242550|MUC4|4585|mucin 4, cell surface associated##AJ276359|MUC4|4585|mucin 4, cell surface associated##AJ277412|MUC4|4585|mucin 4, cell surface associated##AJ277505|MUC4|4585|mucin 4, cell surface associated##AJ400633|MUC4|4585|mucin 4, cell surface associated##AJ400849|MUC4|4585|mucin 4, cell surface associated##AJ400850|MUC4|4585|mucin 4, cell surface associated##AJ400851|MUC4|4585|mucin 4, cell surface associated##AJ400852|MUC4|4585|mucin 4, cell surface associated##AJ400853|MUC4|4585|mucin 4, cell surface associated##AJ400854|MUC4|4585|mucin 4, cell surface associated##AJ400855|MUC4|4585|mucin 4, cell surface associated##AJ400856|MUC4|4585|mucin 4, cell surface associated##AJ400857|MUC4|4585|mucin 4, cell surface associated##AJ400858|MUC4|4585|mucin 4, cell surface associated##AK307054|MUC4|4585|mucin 4, cell surface associated##NM_004532|MUC4|4585|mucin 4, cell surface associated##NM_018406|MUC4|4585|mucin 4, cell surface associated##NM_138297|MUC4|4585|mucin 4, cell surface associated##BC008884|TNK2|10188|tyrosine kinase, non-receptor, 2##AK225786|TNK2|10188|tyrosine kinase, non-receptor, 2##BC020389|TNK2|10188|tyrosine kinase, non-receptor, 2##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2	0.585741	CTCF.p2:9:0.586
chr11	67044427	67044571	reg1026012.p1	4.850	+	TSC_hg19_v1_chr11_+_67034167 CU691526 DQ891148 DQ894328	-10326	+	TSC_hg19_v1_chr11_+_67034155 M80776	-10346	+	TSC_hg19_v1_chr11_+_67033929 BC037963 BC090863	-10565	+	NM_207354 TSC_hg19_v1_chr11_+_67056786 BC110419	12275	+	TSC_hg19_v1_chr11_+_67056815 AK124721 AK096277 AK126438	12344	+	NM_017857 TSC_hg19_v1_chr11_+_67070955 AK000522	26442	+	DQ891148|ADRBK1|156|adrenergic, beta, receptor kinase 1##DQ894328|ADRBK1|156|adrenergic, beta, receptor kinase 1##M80776|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC037963|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC090863|ADRBK1|156|adrenergic, beta, receptor kinase 1##NM_207354|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##BC110419|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK124721|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK096277|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK126438|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##NM_017857|SSH3|54961|slingshot homolog 3 (Drosophila)##AK000522|SSH3|54961|slingshot homolog 3 (Drosophila)	0.802834	CTCF.p2:10:0.742
chr12	99646986	99647085	reg1027774.p1	4.850	+	AK294191 NM_001204067	-98168	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	-98478	-	AY356353 AK315954 AM980945 AK294994 TSC_hg19_v1_chr12_-_99288638 AK295988 NM_001204065 NM_001204079 NM_001204080 NM_001204081	-358448	-	NM_153364 AK312767 BC031221	394495	+	NM_152788	731396	-	BC127017 AK125813 TSC_hg19_v1_chr12_-_100536637 BC014891	889514	-	AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_153364|FAM71C|196472|family with sequence similarity 71, member C##AK312767|FAM71C|196472|family with sequence similarity 71, member C##BC031221|FAM71C|196472|family with sequence similarity 71, member C##NM_152788|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC127017|UHRF1BP1L|23074|UHRF1 binding protein 1-like##AK125813|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC014891|UHRF1BP1L|23074|UHRF1 binding protein 1-like	0.475914	CTCF.p2:15:0.476
chr17	44719370	44719526	reg1023890.p1	4.850	+	NM_006178 AF135168 AF102846 AK294001 AK294727 AK294886 AK299786 BC030613 AK226078 AK290204 AK316057 U03985	-51371	+	BC020869 AB209344 AF208864 BX647266 NM_001113738 NM_016632	-62401	-	BC040501 CR749232 NM_001006607	-129373	+	AB464356 AB067628 BC114219 BC112116 BC112118 AY009397 NM_030753	176573	-	AY358217 AK127615 AB063483 NM_003396 BC064534 AB590853	209526	+	TSC_hg19_v1_chr17_+_45000492 NM_001012511 NM_004287 NM_054022	281039	+	NM_006178|NSF|4905|N-ethylmaleimide-sensitive factor##AF135168|NSF|4905|N-ethylmaleimide-sensitive factor##AF102846|NSF|4905|N-ethylmaleimide-sensitive factor##AK294001|NSF|4905|N-ethylmaleimide-sensitive factor##AK294727|NSF|4905|N-ethylmaleimide-sensitive factor##AK294886|NSF|4905|N-ethylmaleimide-sensitive factor##AK299786|NSF|4905|N-ethylmaleimide-sensitive factor##BC030613|NSF|4905|N-ethylmaleimide-sensitive factor##AK226078|NSF|4905|N-ethylmaleimide-sensitive factor##AK290204|NSF|4905|N-ethylmaleimide-sensitive factor##AK316057|NSF|4905|N-ethylmaleimide-sensitive factor##U03985|NSF|4905|N-ethylmaleimide-sensitive factor##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AB209344|ARL17A|51326|ADP-ribosylation factor-like 17A##AF208864|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A##BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_001006607|LRRC37A2|474170|leucine rich repeat containing 37, member A2##AB067628|WNT3|7473|wingless-type MMTV integration site family, member 3##BC114219|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112116|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112118|WNT3|7473|wingless-type MMTV integration site family, member 3##AY009397|WNT3|7473|wingless-type MMTV integration site family, member 3##NM_030753|WNT3|7473|wingless-type MMTV integration site family, member 3##AY358217|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AK127615|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AB063483|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_003396|WNT9B|7484|wingless-type MMTV integration site family, member 9B##BC064534|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_001012511|GOSR2|9570|golgi SNAP receptor complex member 2##NM_004287|GOSR2|9570|golgi SNAP receptor complex member 2##NM_054022|GOSR2|9570|golgi SNAP receptor complex member 2	0.999163	CTCF.p2:-6:0.999
chr21	47604618	47604798	reg1022060.p2	4.850	+	TSC_hg19_v1_chr21_-_47604362 AK309847 AK304535 NM_001142854 NM_032261	-333	-	TSC_hg19_v1_chr21_-_47604340 BC084577	-362	-	AL136871 TSC_hg19_v1_chr21_-_47604330	-392	-	X87809 TSC_hg19_v1_chr21_-_47648594	43797	-	TSC_hg19_v1_chr21_-_47648618 AK226141 CU690148 DQ891234 DQ894418	43934	-	TSC_hg19_v1_chr21_-_47648679 D63807 S81221 BC035638	43969	-	AK309847|C21orf56|84221|chromosome 21 open reading frame 56##AK304535|C21orf56|84221|chromosome 21 open reading frame 56##NM_001142854|C21orf56|84221|chromosome 21 open reading frame 56##NM_032261|C21orf56|84221|chromosome 21 open reading frame 56##BC084577|C21orf56|84221|chromosome 21 open reading frame 56##AL136871|C21orf56|84221|chromosome 21 open reading frame 56##X87809|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##AK226141|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##DQ891234|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##DQ894418|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##D63807|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##S81221|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##BC035638|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)	0.0	
chr2	156059844	156059961	reg1028180.p2	4.850	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-504713	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-1331458	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-1724651	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	1126788	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	1129261	-	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	1232056	+	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	0.0	
chr4	184365567	184365634	reg1026095.p2	4.850	+	NM_001185149	-122022	-	NM_001111319	-123674	-	TSC_hg19_v1_chr4_+_184020431 NM_024949	-345122	+	TSC_hg19_v1_chr4_+_184365788 AK000043 NM_017632	186	+	TSC_hg19_v1_chr4_+_184365846 AF246705 AK096180 BC022270 AK225848 EU446516 CU692522	269	+	TSC_hg19_v1_chr4_-_184425612 BC038563	60038	-	NM_001185149|CLDN24|100132463|claudin 24##NM_001111319|CLDN22|53842|claudin 22##NM_024949|WWC2|80014|WW and C2 domain containing 2##AK000043|CDKN2AIP|55602|CDKN2A interacting protein##NM_017632|CDKN2AIP|55602|CDKN2A interacting protein##AF246705|CDKN2AIP|55602|CDKN2A interacting protein##AK096180|CDKN2AIP|55602|CDKN2A interacting protein##BC022270|CDKN2AIP|55602|CDKN2A interacting protein##AK225848|CDKN2AIP|55602|CDKN2A interacting protein##EU446516|CDKN2AIP|55602|CDKN2A interacting protein##BC038563|LOC389247|389247|uncharacterized LOC389247	0.0	
chr6	53409488	53409637	reg1028100.p1	4.850	+	TSC_hg19_v1_chr6_-_53409528 BC039894 M90656	-45	-	TSC_hg19_v1_chr6_-_53409483 AB516284 CU691792 CU692650 EU832317 EU832402	-96	-	AK299674 AK302948 TSC_hg19_v1_chr6_-_53213749 AF338241 NM_001242828 NM_001242830 NM_001242831 NM_021814	-195701	-	TSC_hg19_v1_chr6_-_53409821 AB262176 BC022487	251	-	TSC_hg19_v1_chr6_-_53409836 AK313480	273	-	TSC_hg19_v1_chr6_-_53409900 AK304288 NM_001197115 NM_001498	349	-	BC039894|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##M90656|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AB516284|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EU832317|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EU832402|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK299674|ELOVL5|60481|ELOVL fatty acid elongase 5##AK302948|ELOVL5|60481|ELOVL fatty acid elongase 5##AF338241|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242828|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242830|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242831|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_021814|ELOVL5|60481|ELOVL fatty acid elongase 5##AB262176|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC022487|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK313480|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK304288|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001197115|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001498|GCLC|2729|glutamate-cysteine ligase, catalytic subunit	0.018081	
chr9	87309282	87309463	reg1026048.p2	4.850	+	U12140 TSC_hg19_v1_chr9_+_87285349	-24040	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-24620	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-24676	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	1047499	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	1246702	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	1246806	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.0	
chr10	26014984	26015103	reg1025997.p2	4.849	+	AY528411 NM_020752	-550754	+	NM_024838 TSC_hg19_v1_chr10_+_25305540 AK125249 BC035132 BX647989	-709493	+	CU693144 DQ892076 DQ895269 BC064597 AK095021 NM_145010 AY454125 AK292495 BC026165	-710069	-	NM_017433	207958	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	208137	+	NM_000818 NM_001134366	490192	+	AY528411|GPR158|57512|G protein-coupled receptor 158##NM_020752|GPR158|57512|G protein-coupled receptor 158##NM_024838|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AK125249|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BC035132|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BX647989|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##DQ892076|ENKUR|219670|enkurin, TRPC channel interacting protein##DQ895269|ENKUR|219670|enkurin, TRPC channel interacting protein##AK095021|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_145010|ENKUR|219670|enkurin, TRPC channel interacting protein##AY454125|ENKUR|219670|enkurin, TRPC channel interacting protein##AK292495|ENKUR|219670|enkurin, TRPC channel interacting protein##BC026165|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_017433|MYO3A|53904|myosin IIIA##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	0.998951	CTCF.p2:-15:0.999
chr10	89531757	89531880	reg1033214.p1	4.849	+	TSC_hg19_v1_chr10_+_89419623 NM_001015880 NM_004670 BC009894 AK312556 AF091242 AF150754 AF074331 AF173365 DQ893625 DQ895430 AF313907	-112273	+	AK309176 NM_001178118	-264229	+	NM_001178117 NM_004897 TSC_hg19_v1_chr10_+_89264649 AK304624 AK312937 AL050356 AF084943 AB209819 AF084944 AY358938 BC032504 AF046914 CU689404	-267343	+	TSC_hg19_v1_chr10_-_89577921 AK075223 NM_032810	46084	-	EU552092 NM_001126049	91375	-	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	91408	+	NM_001015880|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##NM_004670|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##BC009894|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK312556|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF091242|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF150754|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF074331|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF173365|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ893625|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ895430|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF313907|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK309176|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178118|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178117|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_004897|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK304624|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK312937|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AL050356|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF084943|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AB209819|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF084944|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AY358938|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##BC032504|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF046914|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK075223|ATAD1|84896|ATPase family, AAA domain containing 1##NM_032810|ATAD1|84896|ATPase family, AAA domain containing 1##EU552092|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_001126049|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog	0.70827	CTCF.p2:13:0.708
chr1	1643610	1643717	reg1028501.p1	4.849	+	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	-19446	-	BC092507 TSC_hg19_v1_chr1_-_1624149 AK125619	-19505	-	TSC_hg19_v1_chr1_-_1623947 CR936618 BC062371	-19698	-	TSC_hg19_v1_chr1_-_1655767 AK303446 AF067518 AF067519 AF067520 AF067521 AF067522 AF067523 AK301495 AK304679 BC009375 AF067512 AF067513 AF067514 AF067515 AF067516 AF067517 AK303451 NM_033486 NM_033487 NM_033488 NM_033489 NM_033492 NM_033493 U04816 U04817 U04818 U04824 U07704 U07705 NM_024011 NM_033529	12113	-	AL049665 NM_001199787 NM_182838 TSC_hg19_v1_chr1_-_1677454 BC110653	33798	-	AK296722 NM_001198995	46417	-	AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B##BC092507|SLC35E2B|728661|solute carrier family 35, member E2B##AK125619|SLC35E2B|728661|solute carrier family 35, member E2B##CR936618|SLC35E2B|728661|solute carrier family 35, member E2B##BC062371|SLC35E2|9906|solute carrier family 35, member E2##AK303446|CDK11B|984|cyclin-dependent kinase 11B##AF067518|CDK11A|728642|cyclin-dependent kinase 11A##AF067519|CDK11A|728642|cyclin-dependent kinase 11A##AF067520|CDK11A|728642|cyclin-dependent kinase 11A##AF067521|CDK11A|728642|cyclin-dependent kinase 11A##AF067522|CDK11A|728642|cyclin-dependent kinase 11A##AF067523|CDK11A|728642|cyclin-dependent kinase 11A##AK301495|CDK11B|984|cyclin-dependent kinase 11B##AK304679|CDK11B|984|cyclin-dependent kinase 11B##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AF067512|CDK11B|984|cyclin-dependent kinase 11B##AF067513|CDK11B|984|cyclin-dependent kinase 11B##AF067514|CDK11B|984|cyclin-dependent kinase 11B##AF067515|CDK11B|984|cyclin-dependent kinase 11B##AF067516|CDK11B|984|cyclin-dependent kinase 11B##AF067517|CDK11B|984|cyclin-dependent kinase 11B##AK303451|CDK11B|984|cyclin-dependent kinase 11B##NM_033486|CDK11B|984|cyclin-dependent kinase 11B##NM_033487|CDK11B|984|cyclin-dependent kinase 11B##NM_033488|CDK11B|984|cyclin-dependent kinase 11B##NM_033489|CDK11B|984|cyclin-dependent kinase 11B##NM_033492|CDK11B|984|cyclin-dependent kinase 11B##NM_033493|CDK11B|984|cyclin-dependent kinase 11B##U04816|CDK11B|984|cyclin-dependent kinase 11B##U04817|CDK11B|984|cyclin-dependent kinase 11B##U04818|CDK11B|984|cyclin-dependent kinase 11B##U04824|CDK11B|984|cyclin-dependent kinase 11B##U07704|CDK11A|728642|cyclin-dependent kinase 11A##U07705|CDK11A|728642|cyclin-dependent kinase 11A##NM_024011|CDK11A|728642|cyclin-dependent kinase 11A##NM_033529|CDK11A|728642|cyclin-dependent kinase 11A##AL049665|SLC35E2|9906|solute carrier family 35, member E2##NM_001199787|SLC35E2|9906|solute carrier family 35, member E2##NM_182838|SLC35E2|9906|solute carrier family 35, member E2##BC110653|SLC35E2B|728661|solute carrier family 35, member E2B##AK296722|NADK|65220|NAD kinase##NM_001198995|NADK|65220|NAD kinase	0.928482	CTCF.p2:-13:0.928
chr15	41062025	41062173	reg1023657.p2	4.849	+	TSC_hg19_v1_chr15_+_41056274 AK223430 AK311872 NM_005258 BC112262 BC112264 BC143904 HQ258032	-5791	+	TSC_hg19_v1_chr15_-_41047453 AK001441 NM_018145 AK123192	-14635	-	BC063844 TSC_hg19_v1_chr15_-_41047430 AK097286 AK092058	-14666	-	NM_001130448 BC027487 AK291344	118	+	TSC_hg19_v1_chr15_+_41099254 NM_001077268 AK122779 BC015738 AF445414	37243	+	AB528922 AK001496 AK308659 TSC_hg19_v1_chr15_-_41099659 BC000048	37554	-	AK223430|GCHFR|2644|GTP cyclohydrolase I feedback regulator##AK311872|GCHFR|2644|GTP cyclohydrolase I feedback regulator##NM_005258|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112262|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112264|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC143904|GCHFR|2644|GTP cyclohydrolase I feedback regulator##HQ258032|GCHFR|2644|GTP cyclohydrolase I feedback regulator##AK001441|FAM82A2|55177|family with sequence similarity 82, member A2##NM_018145|FAM82A2|55177|family with sequence similarity 82, member A2##AK123192|FAM82A2|55177|family with sequence similarity 82, member A2##BC063844|FAM82A2|55177|family with sequence similarity 82, member A2##AK097286|FAM82A2|55177|family with sequence similarity 82, member A2##AK092058|FAM82A2|55177|family with sequence similarity 82, member A2##NM_001130448|C15orf62|643338|chromosome 15 open reading frame 62##BC027487|C15orf62|643338|chromosome 15 open reading frame 62##AK291344|C15orf62|643338|chromosome 15 open reading frame 62##NM_001077268|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AK122779|ZFYVE19|84936|zinc finger, FYVE domain containing 19##BC015738|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AF445414|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AK001496|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##AK308659|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##BC000048|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17	0.0	
chr20	11893097	11893277	reg1029656.p2	4.849	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	-21738	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-1238618	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	-1238983	-	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	5370	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	1096454	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	1309236	+	AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)	0.0	
chr4	141251582	141251706	reg1026883.p1	4.849	+	AK027797 NM_032547	-73205	+	NM_018717 TSC_hg19_v1_chr4_-_141075339	-176312	-	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	-177306	-	NM_001153446 NM_001153635 BC062684 NM_001153585 NM_001153690	12961	+	NM_001153484 NM_001153552 NM_001153663 TSC_hg19_v1_chr4_+_141294715	43052	+	TSC_hg19_v1_chr4_+_141294799 AF330205 AF448857 AB015335	43124	+	AK027797|SCOC|60592|short coiled-coil protein##NM_032547|SCOC|60592|short coiled-coil protein##NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)##NM_001153446|SCOC|60592|short coiled-coil protein##NM_001153635|SCOC|60592|short coiled-coil protein##BC062684|SCOC|60592|short coiled-coil protein##NM_001153585|SCOC|60592|short coiled-coil protein##NM_001153690|SCOC|60592|short coiled-coil protein##NM_001153484|SCOC|60592|short coiled-coil protein##NM_001153552|SCOC|60592|short coiled-coil protein##NM_001153663|SCOC|60592|short coiled-coil protein##AF330205|SCOC|60592|short coiled-coil protein##AF448857|SCOC|60592|short coiled-coil protein##AB015335|SCOC|60592|short coiled-coil protein	0.994965	CTCF.p2:19:0.995
chr4	5144620	5144720	reg1029702.p2	4.849	+	TSC_hg19_v1_chr4_+_5053464 AJ250839 NM_018401 BC038238 AB528925 DQ890554 DQ893714	-91143	+	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	-91390	+	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	-123524	-	D82070 NM_005750 BC117444 BC117446 HQ258562	382299	+	AY185210 NM_147127 TSC_hg19_v1_chr4_-_5710299	565630	-	AY152402 AY152403 NM_001166136	566604	-	AJ250839|STK32B|55351|serine/threonine kinase 32B##NM_018401|STK32B|55351|serine/threonine kinase 32B##BC038238|STK32B|55351|serine/threonine kinase 32B##DQ890554|STK32B|55351|serine/threonine kinase 32B##DQ893714|STK32B|55351|serine/threonine kinase 32B##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##D82070|C4orf6|10141|chromosome 4 open reading frame 6##NM_005750|C4orf6|10141|chromosome 4 open reading frame 6##BC117444|C4orf6|10141|chromosome 4 open reading frame 6##BC117446|C4orf6|10141|chromosome 4 open reading frame 6##HQ258562|C4orf6|10141|chromosome 4 open reading frame 6##AY185210|EVC2|132884|Ellis van Creveld syndrome 2##NM_147127|EVC2|132884|Ellis van Creveld syndrome 2##AY152402|EVC2|132884|Ellis van Creveld syndrome 2##AY152403|EVC2|132884|Ellis van Creveld syndrome 2##NM_001166136|EVC2|132884|Ellis van Creveld syndrome 2	0.950852	CTCF.p2:11:0.951
chr5	138125541	138125648	reg1027994.p1	4.849	+	TSC_hg19_v1_chr5_+_138089137 AK094151 D13866 BC000385 AK304267	-36463	+	TSC_hg19_v1_chr5_+_138089107 NM_001903 AK296708 AK300439 D14705	-36500	+	NM_004134	-214277	-	AK309790 TSC_hg19_v1_chr5_-_138211025 AB007876 BC028172 AK291064 AK297332	85419	-	TSC_hg19_v1_chr5_-_138211057 NM_015564	85465	-	HQ589335 TSC_hg19_v1_chr5_+_138211097	85497	+	AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##NM_004134|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##HQ589335|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	0.780516	CTCF.p2:-22:0.749
chr6	129128850	129128963	reg1028947.p1	4.849	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-287250	-	AK124031 NM_001164687	-889148	-	AK292046 AK097903 BC144034 BC130516 NM_001010923 NM_001164685	-906706	-	NM_000426 NM_001079823 Z26653	75407	+	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	902420	-	NM_001010876	1053509	-	Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##AK292046|THEMIS|387357|thymocyte selection associated##AK097903|THEMIS|387357|thymocyte selection associated##BC144034|THEMIS|387357|thymocyte selection associated##BC130516|THEMIS|387357|thymocyte selection associated##NM_001010923|THEMIS|387357|thymocyte selection associated##NM_001164685|THEMIS|387357|thymocyte selection associated##NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191	0.76663	CTCF.p2:0:0.767
chr11	117688441	117688508	reg1002956.p1	4.848	+	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	-20515	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	-20621	-	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-489643	+	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	6960	-	BT006721 BC005302 NM_021603	10292	-	AL136699 TSC_hg19_v1_chr11_-_117747374 AY358976 BC018652 BC093040 AK311736 AL832811 AK290757	58915	-	AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2##BT006721|FXYD2|486|FXYD domain containing ion transport regulator 2##BC005302|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_021603|FXYD2|486|FXYD domain containing ion transport regulator 2##AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6##AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6	0.0	
chr13	104440494	104440624	reg1024773.p1	4.848	+	NM_000452 U10417	-721364	-	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-942073	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-942305	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	1677745	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	1678032	+	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	2746790	-	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2	0.19248	
chr15	63796741	63796837	reg1023856.p4	4.848	+	TSC_hg19_v1_chr15_+_63796791 AK314223	-7	+	AK315769 NM_001218 NM_206925 TSC_hg19_v1_chr15_-_63674076	-122714	-	BT006656 DQ893188 DQ896511 EU831616 EU831623 EU831703 EU831708 AF051882 BC000278 AF037335 BC011691 TSC_hg19_v1_chr15_-_63674046 AK096845 BC023981	-122797	-	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	88	+	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	92790	+	BC017581 BC036918 AK093077 TSC_hg19_v1_chr15_-_63893135	96253	-	AK314223|USP3|9960|ubiquitin specific peptidase 3##AK315769|CA12|771|carbonic anhydrase XII##NM_001218|CA12|771|carbonic anhydrase XII##NM_206925|CA12|771|carbonic anhydrase XII##BT006656|CA12|771|carbonic anhydrase XII##DQ893188|CA12|771|carbonic anhydrase XII##DQ896511|CA12|771|carbonic anhydrase XII##EU831616|CA12|771|carbonic anhydrase XII##EU831623|CA12|771|carbonic anhydrase XII##EU831703|CA12|771|carbonic anhydrase XII##EU831708|CA12|771|carbonic anhydrase XII##AF051882|CA12|771|carbonic anhydrase XII##BC000278|CA12|771|carbonic anhydrase XII##AF037335|CA12|771|carbonic anhydrase XII##BC011691|CA12|771|carbonic anhydrase XII##AK096845|CA12|771|carbonic anhydrase XII##BC023981|CA12|771|carbonic anhydrase XII##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC017581|LOC100130855|100130855|uncharacterized LOC100130855##BC036918|LOC100130855|100130855|uncharacterized LOC100130855##AK093077|LOC100130855|100130855|uncharacterized LOC100130855	0.0	
chr19	49298769	49298950	reg1000755.p2	4.848	+	AY359086 NM_019113 AB021975 AB590410 DQ891786 DQ894970	-39441	+	D87935 D87936 D87937 NM_000148	-40213	-	AB195682 BC034769 NM_182575 AK301750	-48764	-	AK310243 U68418 CU674922 DQ892350 DQ895554 AF268047 AF268048 TSC_hg19_v1_chr19_-_49314287 BC001900 AK093627 AK309428 AK223522 AK310101 AK314548 NM_001164773 NM_001190	15389	-	AB528622 CU675337 TSC_hg19_v1_chr19_-_49339769 BC006283 BC006294 AK307437 AF126781	40915	-	TSC_hg19_v1_chr19_-_49339923 NM_016246	41064	-	AY359086|FGF21|26291|fibroblast growth factor 21##NM_019113|FGF21|26291|fibroblast growth factor 21##AB021975|FGF21|26291|fibroblast growth factor 21##DQ891786|FGF21|26291|fibroblast growth factor 21##DQ894970|FGF21|26291|fibroblast growth factor 21##D87935|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##D87936|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##D87937|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##NM_000148|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##AB195682|IZUMO1|284359|izumo sperm-egg fusion 1##BC034769|IZUMO1|284359|izumo sperm-egg fusion 1##NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1##AK301750|IZUMO1|284359|izumo sperm-egg fusion 1##AK310243|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##U68418|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##DQ892350|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##DQ895554|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AF268047|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AF268048|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##BC001900|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK093627|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK309428|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK223522|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK310101|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK314548|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##NM_001164773|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##NM_001190|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##BC006283|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##BC006294|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AK307437|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AF126781|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##NM_016246|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14	0.0	
chr21	43843624	43843726	reg1030486.p2	4.848	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-19663	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-27514	-	M12075 BC032811 NM_003225 X00474 X52003	-57053	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	72705	-	AJ269529 NM_018964	76066	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	90328	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.0	
chr3	126973646	126973755	reg1030390.p2	4.848	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	-61706	+	AB385178 NM_032242 X87832	-266260	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-550623	+	AB037108 NM_016372	325579	-	TSC_hg19_v1_chr3_-_127309338 BC017058	335644	-	BC050711 NM_001136053 AF289568 TSC_hg19_v1_chr3_-_127309565 NM_001142646	335833	-	AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC017058|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC050711|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001136053|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##AF289568|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001142646|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	0.727423	CTCF.p2:7:0.727
chr3	48723397	48723498	reg1019613.p2	4.848	+	AB384897 CU677561 BC016052 BC006255 TSC_hg19_v1_chr3_-_48723349 AF303581 BC026280 AF178432 AJ242655 AY453794 NM_016453 NM_184231	-152	-	TSC_hg19_v1_chr3_-_48700322 AF231023 NM_001407	-23112	-	AK056237 NM_022911 NM_134263 NM_134426 TSC_hg19_v1_chr3_-_48672944	-50500	-	TSC_hg19_v1_chr3_-_48754622 BC019694 AK291501 AY007091 BC001864 BC065533 BC004469 AK304714 AK315204 AK024045 AK290526 AL137514 BX537544 NM_001005909 NM_001005910 NM_001005911 NM_001146178 NM_001146179 NM_001190316 NM_001190317 NM_016291	31202	-	BT007225 AB464095 CU678176 TSC_hg19_v1_chr3_-_48885175	161662	-	X14968 TSC_hg19_v1_chr3_-_48885238 AK293042	161788	-	BC016052|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC006255|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF303581|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC026280|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF178432|NCKIPSD|51517|NCK interacting protein with SH3 domain##AJ242655|NCKIPSD|51517|NCK interacting protein with SH3 domain##AY453794|NCKIPSD|51517|NCK interacting protein with SH3 domain##NM_016453|NCKIPSD|51517|NCK interacting protein with SH3 domain##NM_184231|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF231023|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)##NM_001407|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)##AK056237|SLC26A6|65010|solute carrier family 26, member 6##NM_022911|SLC26A6|65010|solute carrier family 26, member 6##NM_134263|SLC26A6|65010|solute carrier family 26, member 6##NM_134426|SLC26A6|65010|solute carrier family 26, member 6##BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2##AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2##AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2##BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2##BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2##BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2##AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2##AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2##AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2##AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2##AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2##BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2##BT007225|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha##X14968|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha##AK293042|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha	0.010597	
chr4	183731030	183731163	reg1035078.p1	4.848	+	NM_001080477 HE578284 HE578285	-485942	+	TSC_hg19_v1_chr4_+_183065111 AK308489	-665971	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-5367453	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	107434	-	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	107538	-	TSC_hg19_v1_chr4_+_184020431 NM_024949	289382	+	NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##NM_024949|WWC2|80014|WW and C2 domain containing 2	0.369475	CTCF.p2:3:0.369
chr8	29326869	29327029	reg1025759.p1	4.848	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-118879	-	AL137704 NM_057158	-120628	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-206335	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	613525	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	613623	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	625994	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chr11	133800734	133800883	reg1028793.p1	4.847	+	AF521713 AK098717 NM_174927 BC058039	-85427	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	-398494	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-987203	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	26074	-	AJ416101 NM_001205329 NM_032801 AY358335 TSC_hg19_v1_chr11_+_133938938 AK074769 AF448478	138073	+	AK075309 AK125071 AK225666 TSC_hg19_v1_chr11_+_133938965 BC057284 AJ344431 AF356518 BC012147 BC010690	138164	+	AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B##AJ416101|JAM3|83700|junctional adhesion molecule 3##NM_001205329|JAM3|83700|junctional adhesion molecule 3##NM_032801|JAM3|83700|junctional adhesion molecule 3##AY358335|JAM3|83700|junctional adhesion molecule 3##AK074769|JAM3|83700|junctional adhesion molecule 3##AF448478|JAM3|83700|junctional adhesion molecule 3##AK075309|JAM3|83700|junctional adhesion molecule 3##AK125071|JAM3|83700|junctional adhesion molecule 3##AK225666|JAM3|83700|junctional adhesion molecule 3##BC057284|JAM3|83700|junctional adhesion molecule 3##AJ344431|JAM3|83700|junctional adhesion molecule 3##AF356518|JAM3|83700|junctional adhesion molecule 3##BC012147|JAM3|83700|junctional adhesion molecule 3##BC010690|JAM3|83700|junctional adhesion molecule 3	0.945706	CTCF.p2:-13:0.946
chr1	200835889	200835996	reg1019971.p2	4.847	+	TSC_hg19_v1_chr1_+_200708732 AK095640 NM_203459	-127271	+	TSC_hg19_v1_chr1_-_200639091 BC041801 NM_001031725	-196834	-	AK299219 BC020201 TSC_hg19_v1_chr1_-_200639024 AL136611 BC014183 AK307569	-196913	-	BC126386 BC126388 AK315339 NM_005298	6181	+	TSC_hg19_v1_chr1_+_200860668 NM_018265 AK001583 AK001763 BC106877	24704	+	AK316510 NM_001142569 TSC_hg19_v1_chr1_+_200864027 AK303885	28055	+	AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##BC041801|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_001031725|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK299219|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC020201|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AL136611|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC014183|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK307569|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC126386|GPR25|2848|G protein-coupled receptor 25##BC126388|GPR25|2848|G protein-coupled receptor 25##AK315339|GPR25|2848|G protein-coupled receptor 25##NM_005298|GPR25|2848|G protein-coupled receptor 25##NM_018265|C1orf106|55765|chromosome 1 open reading frame 106##AK001583|C1orf106|55765|chromosome 1 open reading frame 106##AK001763|C1orf106|55765|chromosome 1 open reading frame 106##BC106877|C1orf106|55765|chromosome 1 open reading frame 106##AK316510|C1orf106|55765|chromosome 1 open reading frame 106##NM_001142569|C1orf106|55765|chromosome 1 open reading frame 106##AK303885|C1orf106|55765|chromosome 1 open reading frame 106	0.0	
chr1	219639155	219639335	reg1032104.p2	4.847	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-292003	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-292087	+	M19154 TSC_hg19_v1_chr1_+_218519634	-1119640	+	BC036078 TSC_hg19_v1_chr1_-_220101540	462284	-	AB464233 TSC_hg19_v1_chr1_-_220101784	462546	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	462720	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.0	
chr12	95212164	95212230	reg1029300.p2	4.847	+	EU831778 EU831856 BC040535 NM_020698	-167933	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-358465	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-358555	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	185273	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	185319	-	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	255101	-	EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	0.0	
chr1	41898222	41898337	reg1000374.p1	4.847	+	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-190443	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-190494	-	BC021252 NM_001172221	-269591	-	BC034393 X55177 M65199 NM_001956	52040	-	TSC_hg19_v1_chr1_-_42384357 BC040942	486063	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	486094	-	BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC021252|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172221|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.0	
chr17	79885886	79885979	reg1025007.p2	4.847	+	TSC_hg19_v1_chr17_+_79885722 BC101984 BC101987 BC104740 BC134411 BC046361 BC025326 BC063671	-213	+	TSC_hg19_v1_chr17_-_79885601 AF059195 NM_002359	-359	-	Y11514 TSC_hg19_v1_chr17_-_79881343 U84249 BC012327 NM_032711	-4559	-	AF218000 NM_006907 NM_153824 TSC_hg19_v1_chr17_-_79895136 AK297627 BC071842 AK303852 AK225879	9149	-	BC029306 NM_001145113	19176	-	NM_178493 TSC_hg19_v1_chr17_-_79919064 BC060882	33130	-	BC134411|LOC92659|92659|uncharacterized LOC92659##BC046361|LOC92659|92659|uncharacterized LOC92659##BC025326|LOC92659|92659|uncharacterized LOC92659##BC063671|LOC92659|92659|uncharacterized LOC92659##AF059195|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)##NM_002359|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)##Y11514|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)##U84249|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)##BC012327|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)##NM_032711|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)##AF218000|PYCR1|5831|pyrroline-5-carboxylate reductase 1##NM_006907|PYCR1|5831|pyrroline-5-carboxylate reductase 1##NM_153824|PYCR1|5831|pyrroline-5-carboxylate reductase 1##AK297627|PYCR1|5831|pyrroline-5-carboxylate reductase 1##BC071842|PYCR1|5831|pyrroline-5-carboxylate reductase 1##AK225879|PYCR1|5831|pyrroline-5-carboxylate reductase 1##BC029306|MYADML2|255275|myeloid-associated differentiation marker-like 2##NM_001145113|MYADML2|255275|myeloid-associated differentiation marker-like 2##NM_178493|NOTUM|147111|notum pectinacetylesterase homolog (Drosophila)##BC060882|NOTUM|147111|notum pectinacetylesterase homolog (Drosophila)	0.014254	
chr11	3900723	3900872	reg1023683.p1	4.846	+	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	-23868	+	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	-38598	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	-38642	-	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	215192	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	215269	+	TSC_hg19_v1_chr11_+_4116085 AK297988 BC006498 CU675435 DQ893028 DQ896272	215362	+	NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1##X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1##AK297988|RRM1|6240|ribonucleotide reductase M1##BC006498|RRM1|6240|ribonucleotide reductase M1##DQ893028|RRM1|6240|ribonucleotide reductase M1##DQ896272|RRM1|6240|ribonucleotide reductase M1	0.031262	
chr16	28502749	28502918	reg1028952.p1	4.846	+	BC157842 AK292155 NM_001199142	-65115	-	AK055366 AK299421 AK303790 AK304500 TSC_hg19_v1_chr16_-_28415162 AK301233 AK301183 NM_001099661 BC107692 NM_001037808 NM_003752	-87676	-	DQ891632 DQ894822 AB527254 BC157849 BC071705 AK000739 AK293264 AY762099 TSC_hg19_v1_chr16_-_28415133 BC000533 BC001571	-87792	-	AF077956 AF077957 AF077958 AF077959 AF077960 AF077961 AF077962 AF077963 AF077964 AF077965 AF077966 AF077967 AF077968 AF077969 AF077970 AF077971 AF077972 AF077973 AF078169 AF015596 AF078168 AF015593 AF015602 AF015599 AF015597 AF015594 AF015595 AF015598 AF015601 AF015600 U32680 TSC_hg19_v1_chr16_-_28503318 AK294070 BC111068 AK297690 AK295500 AK302027 BC002394 BC004433 AK302138 AK294250 AK313002 NM_000086	407	-	NM_001042432	789	-	TSC_hg19_v1_chr16_+_28505969 NM_018690 AF141332 AF141334 BC119786 BC119788	3129	+	BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AF077956|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077957|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077958|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077959|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077960|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077961|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077962|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077963|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077964|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077965|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077966|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077967|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077968|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077969|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077970|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077971|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077972|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077973|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF078169|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015596|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF078168|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015593|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015602|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015599|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015597|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015594|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015595|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015598|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015601|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015600|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##U32680|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK294070|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##BC111068|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK297690|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK295500|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK302027|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##BC002394|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##BC004433|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK302138|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK294250|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK313002|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##NM_000086|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##NM_001042432|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##NM_018690|APOBR|55911|apolipoprotein B receptor##AF141332|APOBR|55911|apolipoprotein B receptor##AF141334|APOBR|55911|apolipoprotein B receptor##BC119786|APOBR|55911|apolipoprotein B receptor##BC119788|APOBR|55911|apolipoprotein B receptor	0.433699	CTCF.p2:15:0.434
chr2	240931222	240931359	reg1025717.p1	4.846	+	TSC_hg19_v1_chr2_-_240323341 AK308791	-607942	-	TSC_hg19_v1_chr2_-_240322695 BC039904	-608592	-	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	-608642	-	AF453834 TSC_hg19_v1_chr2_-_240964750 CU678462 DQ891011 DQ894191 BC031332 AF087661 AB209440 AK290778 BC003417 AF087854	33471	-	TSC_hg19_v1_chr2_-_240964807 NM_004544	33522	-	NM_001005853 BC137561 BC137562	38585	-	AK308791|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##AF453834|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ891011|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ894191|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC031332|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087661|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AB209440|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AK290778|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC003417|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087854|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_004544|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_001005853|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137561|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137562|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2	0.0	
chr2	65577966	65578128	reg1029615.p1	4.846	+	NM_001005386 NM_005722 TSC_hg19_v1_chr2_+_65454944 AK295157 AK301634 BC014546 BX649080 AF006082 AK315205 AB462954 EU831978 EU832071	-123112	+	TSC_hg19_v1_chr2_-_65454728 AK055581	-123311	-	TSC_hg19_v1_chr2_-_65357263 NM_004161 NM_015543	-220706	-	TSC_hg19_v1_chr2_-_65593766 AK299079	15726	-	TSC_hg19_v1_chr2_-_65593867 NM_001128210	15851	-	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	81165	-	NM_001005386|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##NM_005722|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK295157|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK301634|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BC014546|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BX649080|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AF006082|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK315205|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU831978|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU832071|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK055581|LOC729324|729324|hCG1986447##NM_004161|RAB1A|5861|RAB1A, member RAS oncogene family##NM_015543|RAB1A|5861|RAB1A, member RAS oncogene family##AK299079|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_001128210|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2	0.0	
chr4	2789214	2789305	reg1027811.p1	4.846	+	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	-31196	-	AK026176 NM_001161527	-31509	-	AB000459 AB000460 AB000461 NM_003704 BC136646 BC144337 BC144339 BC144340	-162086	+	TSC_hg19_v1_chr4_+_2794755 AK225497 NM_001122681 BC022996	5476	+	AK312286 TSC_hg19_v1_chr4_+_2794811 AK307106	5563	+	NM_001145855 TSC_hg19_v1_chr4_+_2813962	24695	+	AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2##AK026176|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001161527|TNIP2|79155|TNFAIP3 interacting protein 2##AB000459|FAM193A|8603|family with sequence similarity 193, member A##AB000460|FAM193A|8603|family with sequence similarity 193, member A##AB000461|FAM193A|8603|family with sequence similarity 193, member A##NM_003704|FAM193A|8603|family with sequence similarity 193, member A##BC136646|FAM193A|8603|family with sequence similarity 193, member A##BC144337|FAM193A|8603|family with sequence similarity 193, member A##BC144339|FAM193A|8603|family with sequence similarity 193, member A##BC144340|FAM193A|8603|family with sequence similarity 193, member A##AK225497|SH3BP2|6452|SH3-domain binding protein 2##NM_001122681|SH3BP2|6452|SH3-domain binding protein 2##BC022996|SH3BP2|6452|SH3-domain binding protein 2##AK312286|SH3BP2|6452|SH3-domain binding protein 2##AK307106|SH3BP2|6452|SH3-domain binding protein 2##NM_001145855|SH3BP2|6452|SH3-domain binding protein 2	0.0	
chr19	45348897	45349037	reg1008640.p3	4.845	+	TSC_hg19_v1_chr19_+_45312359 BC014065 NM_001013257 NM_005581 X83425 BC036745 X80026 BC050450 AB463427 CU690688 HE572749	-36611	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	-67811	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	-96986	+	NM_001042724 NM_002856 TSC_hg19_v1_chr19_+_45349482	475	+	TSC_hg19_v1_chr19_+_45349564 AK291330	596	+	BC003091 TSC_hg19_v1_chr19_+_45349584 AF058448 AB528739 DQ891829 DQ895015 CR456818 X80038 CU678368	716	+	NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##NM_001042724|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##NM_002856|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##AK291330|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##BC003091|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##AF058448|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##DQ891829|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##DQ895015|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##CR456818|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##X80038|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)	0.114982	
chr20	52456132	52456313	reg1024853.p1	4.845	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-245423	-	AF041259 NM_006526	-256587	-	AK302570 NM_001193421	-654401	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	230840	-	AK315220 NM_003657	231081	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	334298	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr4	148784633	148784736	reg1028123.p2	4.845	+	AB050785 BC128055 NM_024605 BC126899 BC109029 BC109030	-131227	+	TSC_hg19_v1_chr4_+_148653238 AK123785	-131433	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	-179420	-	TSC_hg19_v1_chr4_-_149357955 AB587357	573298	-	TSC_hg19_v1_chr4_-_149363305 BC111758	578655	-	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	578900	-	AB050785|ARHGAP10|79658|Rho GTPase activating protein 10##BC128055|ARHGAP10|79658|Rho GTPase activating protein 10##NM_024605|ARHGAP10|79658|Rho GTPase activating protein 10##BC126899|ARHGAP10|79658|Rho GTPase activating protein 10##BC109029|ARHGAP10|79658|Rho GTPase activating protein 10##BC109030|ARHGAP10|79658|Rho GTPase activating protein 10##AK123785|ARHGAP10|79658|Rho GTPase activating protein 10##BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	0.071806	
chr5	115893632	115893812	reg1012400.p2	4.845	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-473001	+	NM_001195581	-506560	+	AK291655 BC068560 NM_173800 BC060869 AY560010 BC109022 BC109023	-595511	+	TSC_hg19_v1_chr5_+_115898220 D28352	4502	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	16792	-	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2430516	-	AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##NM_001195581|LOC644100|644100|uncharacterized LOC644100##AK291655|AQPEP|206338|laeverin##BC068560|AQPEP|206338|laeverin##NM_173800|AQPEP|206338|laeverin##BC060869|AQPEP|206338|laeverin##AY560010|AQPEP|206338|laeverin##BC109022|AQPEP|206338|laeverin##BC109023|AQPEP|206338|laeverin##AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2	0.0	
chr7	22122503	22122620	reg1015108.p1	4.845	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-137079	-	AJ320497 NM_003777	-539729	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-654237	+	AL833195 NM_012294	273960	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	417286	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	644262	+	AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)	0.0	
chr8	108080981	108081101	reg1025556.p1	4.845	+	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	-298597	-	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	-342686	+	TSC_hg19_v1_chr8_+_107670114 AK292899 BC032710 BC019691	-410926	+	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	429147	-	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	1014833	-	AB527268 CR457029 CR542275 CU674376 CU677689 CU678957 DQ892278 DQ895478 BC000734 TSC_hg19_v1_chr8_-_109260938 U54562 U85947	1179893	-	AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AK292899|OXR1|55074|oxidation resistance 1##BC032710|OXR1|55074|oxidation resistance 1##BC019691|OXR1|55074|oxidation resistance 1##U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2##CR457029|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR542275|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ892278|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ895478|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC000734|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U54562|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U85947|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E	0.14744	
chr10	94840321	94840389	reg1001153.p2	4.844	+	AK075374 NM_000783 AF005418	-6699	+	AK027560 NM_057157	-7124	+	AY356349 NM_183374	-19335	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	401693	-	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	416033	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	486154	+	AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1	0.0	
chr15	22707543	22707662	reg1031211.p1	4.844	+	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	-234380	-	BC136597 BC136598 NM_001005241 DQ786223	-325157	+	BC136985 NM_001004719	-339125	+	AK097517 NM_001001413	28643	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	125868	+	TSC_hg19_v1_chr15_+_22892666 AY763577	184997	+	BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AY763577|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	0.864445	CTCF.p2:5:0.836
chr2	132288448	132288553	reg1027792.p1	4.844	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-2994	+	AK304811 TSC_hg19_v1_chr2_+_132250648 AK293811 AK300337 AK303293 AK308371 BC093080	-37915	+	TSC_hg19_v1_chr2_-_132250072 NM_001085365	-38439	-	AF038169 NM_013310	191563	+	BC043584 NM_214461	270733	-	AK122643 NM_001508	885646	+	BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK304811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK293811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK300337|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK303293|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK308371|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC093080|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39	0.961134	CTCF.p2:-6:0.961
chr15	77323716	77323806	reg1002266.p1	4.843	+	TSC_hg19_v1_chr15_+_77287743 AK310072 AB451310 AB451440 AF038602 AF038603 DQ891779 DQ894963 AB528365	-35934	+	AK304052 U94778 AK316220 TSC_hg19_v1_chr15_+_77287720 AK298733	-36055	+	TSC_hg19_v1_chr15_+_77287465 AK309856 NM_003978 AK310126 BC008602	-36271	+	TSC_hg19_v1_chr15_-_77363389 AF054840 CU674348 AB529127 AF133423 AK293677 AK001310 AK001305 BC004280 BC009248 AK075336 AK075482 AK095520 AK298157	39525	-	TSC_hg19_v1_chr15_-_77363454 BC011206 BC000704 AK001326	39722	-	TSC_hg19_v1_chr15_-_77363522 NM_001168412 NM_005724 NM_198902	39783	-	AK310072|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451310|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451440|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038603|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ891779|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ894963|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF054840|TSPAN3|10099|tetraspanin 3##AF133423|TSPAN3|10099|tetraspanin 3##AK293677|TSPAN3|10099|tetraspanin 3##AK001310|TSPAN3|10099|tetraspanin 3##AK001305|TSPAN3|10099|tetraspanin 3##BC004280|TSPAN3|10099|tetraspanin 3##BC009248|TSPAN3|10099|tetraspanin 3##AK075336|TSPAN3|10099|tetraspanin 3##AK075482|TSPAN3|10099|tetraspanin 3##AK298157|TSPAN3|10099|tetraspanin 3##BC011206|TSPAN3|10099|tetraspanin 3##BC000704|TSPAN3|10099|tetraspanin 3##AK001326|TSPAN3|10099|tetraspanin 3##NM_001168412|TSPAN3|10099|tetraspanin 3##NM_005724|TSPAN3|10099|tetraspanin 3##NM_198902|TSPAN3|10099|tetraspanin 3	0.0	
chr16	31467146	31467246	reg1026266.p2	4.843	+	AK096248 NM_001136509	-12850	-	DQ890561 DQ893723 M83308 BC029818 NM_005205	-27497	-	AK097160 AB208945 NM_005353 AK301028 AB384792 U37028	-62558	+	TSC_hg19_v1_chr16_+_31469624 AK295790	2361	+	TSC_hg19_v1_chr16_+_31470117 AK294897 AY217348 NM_001105247 NM_024742 BC014945	3059	+	TSC_hg19_v1_chr16_+_31470830 AK024430	3630	+	AK096248|ZNF843|283933|zinc finger protein 843##NM_001136509|ZNF843|283933|zinc finger protein 843##DQ890561|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##DQ893723|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##M83308|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##BC029818|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##NM_005205|COX6A2|1339|cytochrome c oxidase subunit VIa polypeptide 2##AK097160|ITGAD|3681|integrin, alpha D##AB208945|ITGAD|3681|integrin, alpha D##NM_005353|ITGAD|3681|integrin, alpha D##AK301028|ITGAD|3681|integrin, alpha D##U37028|ITGAD|3681|integrin, alpha D##AK295790|ARMC5|79798|armadillo repeat containing 5##AK294897|ARMC5|79798|armadillo repeat containing 5##AY217348|ARMC5|79798|armadillo repeat containing 5##NM_001105247|ARMC5|79798|armadillo repeat containing 5##NM_024742|ARMC5|79798|armadillo repeat containing 5##BC014945|ARMC5|79798|armadillo repeat containing 5##AK024430|ARMC5|79798|armadillo repeat containing 5	0.236886	CTCF.p2:-21:0.237
chr3	127494259	127494426	reg1029479.p1	4.843	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-102525	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-146310	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-177058	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	47088	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	47800	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	139976	+	NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.0	
chr1	160132212	160132296	reg1028545.p1	4.842	+	NM_144699 AF506797 BC068570 BC036052 BX647234 AL833335 AK308286 BC094801	-10879	+	NM_000702 AK124581 AK091617 AK225127 AK295048 AK314296 TSC_hg19_v1_chr1_+_160085548 BC047533 AB018321 BC052271	-46711	+	AK308115 NM_001206665 TSC_hg19_v1_chr1_-_160068754	-63566	-	BC028297 NM_001001734	14946	+	NM_001231 AK300713 AK313250 BC022289 S73775	28092	+	TSC_hg19_v1_chr1_+_160175124 NM_003768 BC022554	42875	+	NM_144699|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AF506797|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC068570|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC036052|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BX647234|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AL833335|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AK308286|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC094801|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##NM_000702|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK124581|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK091617|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK295048|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK314296|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##BC047533|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AB018321|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##BC052271|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK308115|IGSF8|93185|immunoglobulin superfamily, member 8##NM_001206665|IGSF8|93185|immunoglobulin superfamily, member 8##BC028297|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##NM_001001734|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##NM_001231|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##AK300713|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##AK313250|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##BC022289|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##S73775|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##NM_003768|PEA15|8682|phosphoprotein enriched in astrocytes 15##BC022554|PEA15|8682|phosphoprotein enriched in astrocytes 15	0.160003	
chr11	76518683	76518772	reg1007563.p2	4.842	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	-24450	+	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	-136918	-	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	-137759	-	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	53205	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	53266	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	226732	+	NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3##NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)	1.026123	
chr16	57809620	57809759	reg1028475.p2	4.842	+	TSC_hg19_v1_chr16_+_57769741 AB209250	-39965	+	TSC_hg19_v1_chr16_+_57769662 NM_005886	-40044	+	TSC_hg19_v1_chr16_+_57728717 NM_032269 AK292558 BC030661 BC036667 AK093035 AX747872	-80960	+	BC041132 AK299431 AK291737 NM_001130099	22112	-	TSC_hg19_v1_chr16_-_57836370 AB209290	26682	-	TSC_hg19_v1_chr16_-_57836404 AK307846 BC001211 AK304132 NM_001130100 NM_005550	26720	-	AB209250|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1##NM_005886|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1##NM_032269|CCDC135|84229|coiled-coil domain containing 135##AK292558|CCDC135|84229|coiled-coil domain containing 135##BC030661|CCDC135|84229|coiled-coil domain containing 135##BC036667|CCDC135|84229|coiled-coil domain containing 135##AK093035|CCDC135|84229|coiled-coil domain containing 135##BC041132|KIFC3|3801|kinesin family member C3##AK299431|KIFC3|3801|kinesin family member C3##AK291737|KIFC3|3801|kinesin family member C3##NM_001130099|KIFC3|3801|kinesin family member C3##AB209290|KIFC3|3801|kinesin family member C3##AK307846|KIFC3|3801|kinesin family member C3##BC001211|KIFC3|3801|kinesin family member C3##AK304132|KIFC3|3801|kinesin family member C3##NM_001130100|KIFC3|3801|kinesin family member C3##NM_005550|KIFC3|3801|kinesin family member C3	0.913283	CTCF.p2:-50:0.902
chr2	108799069	108799193	reg1034095.p1	4.842	+	AK315280 AB084377 AK300801 AB043997 NM_021815 BC111525 BC111524	-196129	+	NM_182588 TSC_hg19_v1_chr2_+_108443399	-355737	+	TSC_hg19_v1_chr2_-_107503517 AX795200 AB059555 BC008680 AK307784 NM_001142352 NM_032528 FJ433883	-1295585	-	AB528243 NM_001008743	64519	+	AF186252 AF186255 NM_001056 NM_176825 AF186251 AF186254 AK297086 AK313193 AK298306 U66036 AF186253 AF186256 AB008164 AF026303 BC005353	106154	+	BC058861 NM_006588 AK298755 AF055584 AK297851 BC125043	195372	+	AK315280|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB084377|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AK300801|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB043997|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_021815|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111525|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111524|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_182588|RGPD4|285190|RANBP2-like and GRIP domain containing 4##AB059555|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##BC008680|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##AK307784|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142352|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_032528|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3##AF186252|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186255|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001056|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_176825|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186251|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186254|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK297086|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK313193|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK298306|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##U66036|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186253|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186256|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AB008164|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF026303|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC005353|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC058861|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##NM_006588|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK298755|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK297851|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##BC125043|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4	0.451753	CTCF.p2:17:0.452
chr10	28591640	28591748	reg1025422.p1	4.841	+	BC038105 AK057360 NM_173496	-20654	-	AK292521 TSC_hg19_v1_chr10_-_28287879 AK001679 NM_018076 BC085611	-303810	-	BC036207 TSC_hg19_v1_chr10_-_28034752 AK125339 NM_001242702 NM_173576	-556933	-	TSC_hg19_v1_chr10_-_28591994 AK315046 AK301592	238	-	BC043365 TSC_hg19_v1_chr10_-_28821677	229901	-	AK055852 TSC_hg19_v1_chr10_+_28821707 AK225846	230012	+	BC038105|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK057360|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##NM_173496|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK292521|ARMC4|55130|armadillo repeat containing 4##AK001679|ARMC4|55130|armadillo repeat containing 4##NM_018076|ARMC4|55130|armadillo repeat containing 4##BC085611|ARMC4|55130|armadillo repeat containing 4##BC036207|MKX|283078|mohawk homeobox##AK125339|MKX|283078|mohawk homeobox##NM_001242702|MKX|283078|mohawk homeobox##NM_173576|MKX|283078|mohawk homeobox##AK315046|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##AK301592|MPP7|143098|membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)##BC043365|LOC220906|220906|uncharacterized LOC220906##AK055852|WAC|51322|WW domain containing adaptor with coiled-coil##AK225846|WAC|51322|WW domain containing adaptor with coiled-coil	0.02782	
chr1	160163159	160163247	reg1002248.p2	4.841	+	NM_001231 AK300713 AK313250 BC022289 S73775	-2857	+	BC028297 NM_001001734	-16003	+	NM_144699 AF506797 BC068570 BC036052 BX647234 AL833335 AK308286 BC094801	-41828	+	TSC_hg19_v1_chr1_+_160175124 NM_003768 BC022554	11926	+	TSC_hg19_v1_chr1_+_160175173 AK311762 AK095879 X86809 BC002426 Y13736	11994	+	BC111063 BC013107 TSC_hg19_v1_chr1_-_160232242 AK026481 AK312690 CR749801	69025	-	NM_001231|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##AK300713|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##AK313250|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##BC022289|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##S73775|CASQ1|844|calsequestrin 1 (fast-twitch, skeletal muscle)##BC028297|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##NM_001001734|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##NM_144699|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AF506797|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC068570|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC036052|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BX647234|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AL833335|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AK308286|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC094801|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##NM_003768|PEA15|8682|phosphoprotein enriched in astrocytes 15##BC022554|PEA15|8682|phosphoprotein enriched in astrocytes 15##AK311762|PEA15|8682|phosphoprotein enriched in astrocytes 15##AK095879|PEA15|8682|phosphoprotein enriched in astrocytes 15##X86809|PEA15|8682|phosphoprotein enriched in astrocytes 15##BC002426|PEA15|8682|phosphoprotein enriched in astrocytes 15##Y13736|PEA15|8682|phosphoprotein enriched in astrocytes 15##BC111063|DCAF8|50717|DDB1 and CUL4 associated factor 8##BC013107|DCAF8|50717|DDB1 and CUL4 associated factor 8##AK026481|DCAF8|50717|DDB1 and CUL4 associated factor 8##AK312690|DCAF8|50717|DDB1 and CUL4 associated factor 8##CR749801|DCAF8|50717|DDB1 and CUL4 associated factor 8	0.0	
chr11	63855957	63856091	reg1031225.p1	4.841	+	TSC_hg19_v1_chr11_+_63754327 AK307413	-101711	+	BC010368 BC107701 TSC_hg19_v1_chr11_+_63753917 AK303228 AF161381 AK225133 AL096714 AK091830 BC007519 AY177200 CU675687 CU679683	-102104	+	TSC_hg19_v1_chr11_+_63753896 AK000120	-102163	+	AY358308 BC018370 NM_013280	15276	+	AF086206 BC003188 TSC_hg19_v1_chr11_-_63933439	77297	-	TSC_hg19_v1_chr11_-_63933585 AF202922 BC000270 BC007297 BC008316 NM_014067	77531	-	AK307413|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC010368|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC107701|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK303228|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AF161381|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK225133|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AL096714|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK091830|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##BC007519|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AY177200|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AY358308|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##BC018370|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##NM_013280|FLRT1|23769|fibronectin leucine rich transmembrane protein 1##AF086206|MACROD1|28992|MACRO domain containing 1##BC003188|MACROD1|28992|MACRO domain containing 1##AF202922|MACROD1|28992|MACRO domain containing 1##BC000270|MACROD1|28992|MACRO domain containing 1##BC007297|MACROD1|28992|MACRO domain containing 1##BC008316|MACROD1|28992|MACRO domain containing 1##NM_014067|MACROD1|28992|MACRO domain containing 1	0.99659	CTCF.p2:-9:0.997
chr1	206974959	206975071	reg1030099.p1	4.841	+	AY040367 NM_153758 AB463800	-2789	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-29136	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-116544	+	AF453946 NM_013371	27206	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	64160	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	95785	+	AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24	0.088816	
chr14	107198804	107198920	reg1026765.p1	4.841	+	FJ840101 FJ840103 FJ840105 FJ840106 FJ840110 FJ840116 FJ840119 FJ840153 FJ840184 FJ840185 FJ840188 FJ840189 FJ840190 FJ840192 FJ840197 FJ840199 FJ840203 FJ840206 FJ840207 FJ840208 FJ840209 FJ873863 FJ873875 FJ873894 FJ873921 FJ873929 FJ873938 FJ873947 FJ873950 FJ873952 FJ873965 FJ873977 FJ873996 FJ873997 FJ873999 FJ874008 FJ874014 FJ874026 FJ874040 FJ874044 FJ874061 FJ874068 FJ874078 FJ874079 FJ874080 HM116116 HM116121 HM116146 HM116172 HM116181 HM116193 HM116196 HM116197 HM116201 HM116225 GQ232804 GQ232899 AY003747 AY392896 AY393031 AY393032 AY393052 AY393293 AY393389 AY393434 AY393562 AF103042 AF459629 HM774620 HM774632 AM183987 AM279526 AY312400 EF177989 DQ926546 AJ389183 DQ100956 DQ926096 U00507 AB066845 AB066846 AB066847 AB066848 AB066849 AB066853 AB066854 AB066855 AB066856 AB066860 AB066863 AB066867 AB066872 AB066875 AB066876 AB067169 AB067183 AB067187 AB067188 AB067191 AB067197 AB067198 AB067200 AB067201 AB067203 AB067204 AB067205 AB067206 AB067207 AB067208 AB067209 AB067210 AB067211 AB067212 AB067213 AB067215 AB067216 AB067217 AB067219 AB067220 AB067227 AB067230 AF062247 AF174045 AF174063 AF174117 AF442758 AJ239338 AJ239347 AJ389184 AY781820 AY941845 DQ926224 DQ926451 FJ385297 GU570281 GU570282 HQ378332 U00575 U77371 X79160 Z80836 DQ535270 DQ535432 L28050 M34027 AF062153 AJ131058 AY190826 L21960 TSC_hg19_v1_chr14_-_107179280 AK097955	-19672	-	M87789 L29121 BC069016 L08086 AK123800 BC025314 BC026038 AK131045 AK126133 AK130642 TSC_hg19_v1_chr14_-_107170426 AK097360 AK097364 AK128394 AK307688 BC016381 AK096985 AK097305 AK097356 AK123070 AK129512 AK129622 AK129777 AK130786 AK131065 BC070333 AK097361 AK097363 AK058027 AK129809	-28447	-	AY179836 AY179838 AY179841 AY179844 AY179846 AY179847 AY179848 AY179850 AY179854 AY179855 AY179856 AY179858 AY179860 AY003797 DQ454801 EF583677 EU099154 EU099192 AY003810 DQ454853 AY003779 DQ454620 DQ523910 GU552683 AY003802 AY003865 DQ454802 DQ454808 DQ454937 GU552691 GU552774 HM773974 FJ873961 EF441761 DQ454821 AY996332 FJ840044 FJ840053 FJ840143 FJ840193 FJ840194 FJ840196 FJ840204 FJ840239 FJ873866 FJ873869 FJ873895 FJ873936 FJ874043 GQ232929 HM116184 EF583683 EF175392 EU099153 GQ232967 GU358675 EF583681 EU099116 GU358674 JF810254 EF091907 EF175405 EU667599 EF091906 EF091908 EF091909 EF091910 EF175388 EF175390 EF175395 EF175406 EF175412 EF175417 EF175418 EF175420 EF175428 EF407848 EF441755 EU099106 EU350411 EU350412 EU433866 EU433872 EU433873 EU433879 EU667594 EU667595 EU667596 EU667597 EU667598 EU814958 EU814959 EU814960 EU814963 EU814966 FJ694873 FJ694874 GQ232838 GQ232965 GU358670 GU358676 GU358678 GU358682 JF810255 JF810274 AF103216 EF175425 EF583662 EF583663 EF583664 EF583665 EF583667 EF583673 EF583674 EF583675 EF583682 EU350410 M35478 EF407834 EF566907 EF407828 EF407830 EF583660 DQ100847 AY998726 AF209884 AJ007325 EF473862 EU099204 U86786 U86795 U86797 AF308545 AF308549 AF308553 AF308554 AF308559 AF308560 AF308561 EU090245 GQ903485 GQ903489 GQ903492 EU099120 GQ903503 AJ239384 EU099100 EU099208 Z80841 AF103052 AF103307 EU099086 EU099105 EU099142 EU099250 EU099176 EU099293 HM774304 AY515008 EU099141 EU099212 JN110763 JN110845 JN110914 JN111163 L04334 L04335 L04344 FJ385405 FJ385410 FJ385424 FJ385430 FJ385431 HM774065 HM774083 HM774091 HM774102 HM774365 HM774646 HM774653 HM774656 HM774681 HM774757 HM774769 HM774771 HM774786 HM774863 HM774965 HM775047 AF103339 AY515006 DQ523992 EU099090 EU099092 EU099115 EU099162 EU099179 EU099210 EU099218 EU099282 DQ097895 EF624069 EF624074 EF624075 EF624077 EF624128 EF624129 EF624130 EF624131 EF624138 EF624140 EF624141 EF624143 EF624174 EF624175 EF624176 EF624177 EF624179 EF624180 EF624182 EF624183 EF624184 EF624185 EF624186 EF624187 EF624188 EF624189 EF624190 EF624191 EF624192 EF624193 EU099060 EU099066 EU099128 EU099129 EU099145 EU099158 EU099160 EU099161 EU099165 EU099177 EU099178 EU099180 EU099247 EU146320 EU146330 EU146331 EU146336 EU146348 EU146349 EU146350 EU146351 EU146352 EU146353 EU146354 EU146355 EU146356 EU146357 EU146359 EU146383 EU146385 EU146386 M98324 AY393263 AY393515 DQ524120 EU090241 EU099081 EU099095 EU099099 EU099103 EU099111 EU099121 EU099135 EU099136 EU099164 EU099170 EU099174 EU099189 EU099205 EU099207 EU099209 EU099220 AF306353 AJ132852 AM259138 L12098 AF035025 AY392856 AY392858 AY393000 AY393010 AY393106 AY393123 AY393128 AY393133 AY393135 AY393137 AY393138 AY393233 AY393338 AY393342 AY393350 AY393373 AY393495 AY393496 AY393501 AY393503 AY393504 AY393508 AY393513 AY393514 AY393516 AY393517 AY393518 AY393519 AY393520 AY393522 AY393523 AY393525 AY393528 AY393532 AY393535 AY393538 AY393539 AY393540 AY393541 AY393542 AY393543 AY393544 AY393545 AY393546 AY393604 AY393611 AY393682 DQ100913 EU099069 EU099072 EU099083 EU099117 EU099138 EU099167 EU099168 EU099171 EU099175 EU099188 EU099198 EU099201 EU099202 EU099211 EU099219 EU099236 HM994945 AY574947 AY093586 AY093587 DQ100805 DQ100924 JN158773 AY093585 AF035785 AF098366 AY781822 DQ100688 DQ523989 HM995306 U00502 DQ100709 DQ100908 DQ523957 DQ524013 DQ524031 DQ524041 DQ524127 HM994992 HM994994 HM994997 HM994998 HM995013 HM995114 HM995174 HM995178 HM995180 HM995227 HM995241 HM995248 HM995283 HM995304 HM995307 HM995375 HM995447 HM995450 HM995512 HM995517 HM995520 HM995558 HM995678 HM995679 HM995680 HM995681 HM995682 HM995683 HM995684 HM995685 HM995744 HM996065 HM996269 HM996387 AF004321 AB063837 AB063906 AB063914 AB067012 AB067013 AB067018 AB067022 AB067235 AB363092 AF099200 AF174076 AY781868 AY866799 AY941859 DQ065663 DQ065677 DQ065701 DQ840709 DQ926327 EF178030 FJ195540 FJ385306 FJ385381 GQ856069 GQ903493 GQ903497 GQ903502 GQ903514 Z92894 AB027437 AB063666 AB063701 AB063715 AB063720 AB063763 AB063768 AB063778 AB063780 AB063785 AB063831 AB063902 AB063903 AB063921 AB066830 AB066835 AB066837 AB066840 AB066841 AB066842 AB066843 AB066928 AB066936 AB066939 AB066942 AB066944 AB066948 AB066949 AB066953 AB067158 AB067170 AB067305 AB067309 AB067333 AB067383 AB363078 AB363086 AB363094 AB363097 AB373608 AF021950 AF021951 AF021952 AF021970 AF021992 AF035784 AF062098 AF062127 AF062189 AF062216 AF062283 AF115114 AF115115 AF115116 AF115118 AF115119 AF174042 AF174065 AF174069 AF174073 AF174096 AF174109 AF174126 AF193848 AF217789 AF408721 AF460964 AF460965 AJ239346 AJ239357 AJ239365 AJ239372 AJ239376 AJ389170 AJ389172 AJ389179 AJ389181 AJ413995 AJ414000 AJ414001 AJ414002 AJ414004 AJ414008 AJ414009 AJ414010 AJ414015 AJ414017 AJ414020 AJ414021 AJ414023 AJ414027 AJ416562 AJ555258 AJ555262 AJ555275 AM040567 AY033246 AY055485 AY059634 AY281328 AY281329 AY466503 AY485361 AY553640 AY557623 AY557624 AY557625 AY557626 AY557627 AY561708 AY577304 AY781812 AY927666 AY941846 AY941940 D16837 DQ100681 DQ100723 DQ100733 DQ100777 DQ100808 DQ100811 DQ100820 DQ100839 DQ100902 DQ100906 DQ100912 DQ100952 DQ212523 DQ490739 DQ926531 EF555585 EF624068 EF624070 EF624071 EF624072 EF624073 EF624078 EF624079 EF624132 EF624136 EF624178 EF624181 EF624194 EF624195 EU202446 EU202448 EU835547 EU835554 FJ039781 FJ039784 FJ385379 GQ903484 GQ903486 GQ903487 GQ903490 GQ903491 GQ903495 GQ903496 GQ903498 GQ903500 GQ903501 GQ903504 GQ903507 GQ903509 GQ903511 GU570264 GU570271 GU570274 HM152493 HM152496 HM152502 HM152504 HM152527 HQ378401 HQ392874 HQ689778 HQ689781 JN158782 JN159449 JN159454 L14454 L23519 S73955 U00518 U00550 U00583 U71105 U85240 U89903 X64237 X67903 Z18841 Z34906 Z34908 Z34957 Z34959 Z34960 Z34961 Z34962 Z34963 AY927663 JN158517 DQ535261 DQ535284 DQ535416 DQ535445 DQ535451 DQ535460 EF177997 EF178006 EF178014 GU570268 Z35123 M18516 AF062105 AF062117 AF062156 AF062161 AF062175 AF062193 AF062198 AF062208 AF174026 AY172957 L06923 M62723 X65889 Z14214 Z47222 Z47224 Z47227 Z47233 Z47244 Z47245 Z47246 Z47247 Z47248 Z47249 Z47250 Z47251 Z47252 Z47253 Z47254 Z47255 Z47256 Z47257 Z47258 Z47259 Z47260 Z47261 Z47262 Z47263 Z47264 Z47265 Z47266 Z47267 Z47268 Z47269 Z47270 Z47271 Z47272 Z47273 Z80837 Z80853 CU688244 L23561 M24669 M24670 TSC_hg19_v1_chr14_-_107170387 BC062336	-28627	-	JF810265 DQ454799 FJ840007 FJ840015 DQ454561 DQ454955 DQ454612 DQ454663 DQ454685 FJ840092 FJ840295 FJ873837 AJ008218 JF810272 JF810273 AY003862 AJ132562 Y08732 AF103327 EU099062 EU620029 GQ504979 HQ392897 AF103116 AF103087 AF103100 HM774925 JN110942 HM774229 FJ385350 GQ504960 HM774112 HM774402 HM774448 HM774462 HM774524 HM774766 HM775010 AF103135 HM774927 HM774932 HM774189 U00529 Y14940 AF103057 AF103351 EU146338 L03141 L03153 AF029328 AF485459 DQ431489 L03143 L03173 L03177 AF035801 AY423195 AY423198 AY423206 DQ431488 DQ431492 HM995020 DQ431490 GU570297 HM152513 HM994969 HM994972 HM994977 HM994978 HM994981 HM994982 HM994989 HM995522 HM995532 HM996141 HM996526 DQ187603 DQ187629 DQ322887 DQ322888 DQ322889 DQ322890 DQ322960 DQ840663 DQ840674 DQ840675 DQ840677 DQ840678 DQ840680 DQ840681 DQ840682 DQ840683 DQ840687 DQ840758 DQ840769 DQ840770 DQ840771 DQ840773 DQ840781 DQ840844 DQ840857 DQ840859 DQ840860 DQ840863 DQ840910 DQ840917 DQ840918 AF021973 AF048774 AF115122 AF151702 AF174111 AJ238039 AJ579199 AJ579279 AY866726 AY866767 DQ100754 DQ100773 DQ100787 DQ100849 DQ100977 DQ840729 DQ926055 DQ926218 DQ926255 DQ926308 EF177956 EF178021 GQ267831 U96395 X99352 Y17142 AB063699 AB063849 AB063916 AB067258 AB363156 AF021945 AF129753 AF471200 AF471528 AF471540 AF471541 AF471542 AF471546 AJ300788 AJ389185 AJ556647 AJ556667 AJ579161 AY554174 AY554177 AY554178 AY573190 AY640527 AY640562 AY846273 AY971106 D83679 DQ065693 DQ535269 DQ535318 DQ535335 DQ535453 DQ535464 DQ535482 DQ926153 DQ926492 EF178117 EF178127 EF178131 EU835555 FJ195515 FJ492899 FN563769 GU570345 GU570350 HQ378386 JF806284 U97244 X99353 L33033 Z11950 BC033178 TSC_hg19_v1_chr14_-_107199472	438	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	12439	-	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	20136	-	AK097955|IGHA1|3493|immunoglobulin heavy constant alpha 1##M87789|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC069016|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123800|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC025314|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC026038|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126133|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK130642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097360|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097364|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128394|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016381|IGHM|3507|immunoglobulin heavy constant mu##AK096985|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097305|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097356|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123070|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129512|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129622|IGHM|3507|immunoglobulin heavy constant mu##AK129777|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK131065|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC070333|IGHV1-69|28461|immunoglobulin heavy variable 1-69##AK097361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097363|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058027|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129809|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF035025|IGHV1-69|28461|immunoglobulin heavy variable 1-69##BC062336|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC033178|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu	0.9718	CTCF.p2:1:0.972
chr3	106021491	106021636	reg1026494.p2	4.841	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-433756	-	CR749655 TSC_hg19_v1_chr3_-_105421064	-600509	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-935741	+	TSC_hg19_v1_chr3_-_106959482 BC036229	937916	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	938029	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	1074747	+	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54	0.079183	
chr9	127703899	127704079	reg1023582.p2	4.841	+	TSC_hg19_v1_chr9_-_127703357 BC032853 U51587 NM_002077	-650	-	TSC_hg19_v1_chr9_-_127703273 AK302445	-728	-	TSC_hg19_v1_chr9_+_127631514 AF087842 BC000018 BC002418 HQ448697	-72457	+	AB590983 TSC_hg19_v1_chr9_-_127905808 BC104030 BC104031 BC104032 AK098024 AK093983 AX748393 NM_001144877 NM_173690	201802	-	AB385530 AF035158 BT019708 X92972 TSC_hg19_v1_chr9_-_127952023	248020	-	AK295752 TSC_hg19_v1_chr9_-_127952069 AK312332 BC006990 AK316527 AK295190 AK299087 NM_001123355 NM_001123369 NM_002721	248138	-	BC032853|GOLGA1|2800|golgin A1##U51587|GOLGA1|2800|golgin A1##NM_002077|GOLGA1|2800|golgin A1##AK302445|GOLGA1|2800|golgin A1##AF087842|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##BC000018|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##BC002418|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##HQ448697|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##BC104030|SCAI|286205|suppressor of cancer cell invasion##BC104031|SCAI|286205|suppressor of cancer cell invasion##BC104032|SCAI|286205|suppressor of cancer cell invasion##AK098024|SCAI|286205|suppressor of cancer cell invasion##AK093983|SCAI|286205|suppressor of cancer cell invasion##NM_001144877|SCAI|286205|suppressor of cancer cell invasion##NM_173690|SCAI|286205|suppressor of cancer cell invasion##AF035158|PPP6C|5537|protein phosphatase 6, catalytic subunit##BT019708|PPP6C|5537|protein phosphatase 6, catalytic subunit##X92972|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK295752|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK312332|PPP6C|5537|protein phosphatase 6, catalytic subunit##BC006990|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK316527|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK295190|PPP6C|5537|protein phosphatase 6, catalytic subunit##AK299087|PPP6C|5537|protein phosphatase 6, catalytic subunit##NM_001123355|PPP6C|5537|protein phosphatase 6, catalytic subunit##NM_001123369|PPP6C|5537|protein phosphatase 6, catalytic subunit##NM_002721|PPP6C|5537|protein phosphatase 6, catalytic subunit	0.0	
chr11	67350213	67350333	reg1026881.p1	4.840	+	AB528802 AF169154 BC018476 NM_016366	-59425	-	BC002850 NM_005851 AK308725 TSC_hg19_v1_chr11_-_67276169	-74134	-	TSC_hg19_v1_chr11_-_67275634 BT006909 CR457050 CR542042 AK310197 AK001498 BC016704 AF089814	-74640	-	NM_000852 TSC_hg19_v1_chr11_+_67351145	833	+	TSC_hg19_v1_chr11_+_67351285 AY887902 BC010915 BC044846 X15480 U62589 U30897	1016	+	NM_001166102 NM_007103 TSC_hg19_v1_chr11_+_67374428 AF092131 AF053070 BC008146 AK310537 AK223061 AK293522 AK300726 BC015645 AB590249 CR456739 CU677379 CU678877 DQ893236 DQ896566 AK316122	24128	+	AF169154|CABP2|51475|calcium binding protein 2##BC018476|CABP2|51475|calcium binding protein 2##NM_016366|CABP2|51475|calcium binding protein 2##BC002850|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##NM_005851|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BT006909|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR457050|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR542042|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK310197|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK001498|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BC016704|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AF089814|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##NM_000852|GSTP1|2950|glutathione S-transferase pi 1##BC010915|GSTP1|2950|glutathione S-transferase pi 1##BC044846|GSTP1|2950|glutathione S-transferase pi 1##X15480|GSTP1|2950|glutathione S-transferase pi 1##U62589|GSTP1|2950|glutathione S-transferase pi 1##U30897|GSTP1|2950|glutathione S-transferase pi 1##NM_001166102|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_007103|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF092131|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF053070|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC008146|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK310537|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK223061|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK293522|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK300726|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC015645|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##CR456739|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ893236|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ896566|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK316122|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa	0.0	
chr1	994900	994973	reg1029467.p1	4.840	+	TSC_hg19_v1_chr1_+_978666 BC084578	-16214	+	AF016903 U84406 TSC_hg19_v1_chr1_+_955679	-39291	+	TSC_hg19_v1_chr1_+_955536 AB385240	-39393	+	TSC_hg19_v1_chr1_+_995079 AK310350	150	+	TSC_hg19_v1_chr1_+_995109 BC033949	176	+	AK296576 NM_001205252	14750	-	BC084578|AGRN|375790|agrin##AF016903|AGRN|375790|agrin##U84406|AGRN|375790|agrin##AK310350|LOC100288175|100288175|uncharacterized LOC100288175##BC033949|LOC100288175|100288175|uncharacterized LOC100288175##AK296576|RNF223|401934|ring finger protein 223##NM_001205252|RNF223|401934|ring finger protein 223	0.0	
chr20	43104413	43104594	reg1024461.p2	4.840	+	TSC_hg19_v1_chr20_+_43030005 AB463726 HQ692860 HQ692869 X76930 AB307703	-74481	+	BC137539 BC137540 TSC_hg19_v1_chr20_+_43029974	-74521	+	X87872 X87870 TSC_hg19_v1_chr20_+_43029954 X87871	-74557	+	TSC_hg19_v1_chr20_+_43104525 BC003071 NM_001039199 NM_024331 AK314045 CR936621	44	+	CU675237 DQ896714 DQ893392 AK300618 AF112227 BC006088 TSC_hg19_v1_chr20_-_43150672	46129	-	TSC_hg19_v1_chr20_-_43150683 AF153979 U49188 AK222923	46175	-	HQ692860|HNF4A|3172|hepatocyte nuclear factor 4, alpha##HQ692869|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X76930|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AB307703|HNF4A|3172|hepatocyte nuclear factor 4, alpha##BC137539|HNF4A|3172|hepatocyte nuclear factor 4, alpha##BC137540|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87872|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87870|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87871|HNF4A|3172|hepatocyte nuclear factor 4, alpha##BC003071|TTPAL|79183|tocopherol (alpha) transfer protein-like##NM_001039199|TTPAL|79183|tocopherol (alpha) transfer protein-like##NM_024331|TTPAL|79183|tocopherol (alpha) transfer protein-like##AK314045|TTPAL|79183|tocopherol (alpha) transfer protein-like##CR936621|TTPAL|79183|tocopherol (alpha) transfer protein-like##DQ896714|SERINC3|10955|serine incorporator 3##DQ893392|SERINC3|10955|serine incorporator 3##AK300618|SERINC3|10955|serine incorporator 3##AF112227|SERINC3|10955|serine incorporator 3##BC006088|SERINC3|10955|serine incorporator 3##AF153979|SERINC3|10955|serine incorporator 3##U49188|SERINC3|10955|serine incorporator 3##AK222923|SERINC3|10955|serine incorporator 3	0.0	
chr2	132274273	132274378	reg1028155.p1	4.840	+	AK304811 TSC_hg19_v1_chr2_+_132250648 AK293811 AK300337 AK303293 AK308371 BC093080	-23740	+	TSC_hg19_v1_chr2_-_132250072 NM_001085365	-24264	-	BC063024 TSC_hg19_v1_chr2_-_132249961 BC018206	-24369	-	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	11181	+	AF038169 NM_013310	205738	+	BC043584 NM_214461	284908	-	AK304811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK293811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK300337|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK303293|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK308371|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC093080|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A##BC063024|MZT2A|653784|mitotic spindle organizing protein 2A##BC018206|MZT2A|653784|mitotic spindle organizing protein 2A##BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B	0.570477	CTCF.p2:-9:0.570
chr2	16789965	16790145	reg1017792.p1	4.840	+	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-707888	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-708060	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	-708282	-	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	57089	-	DQ860102 NM_001099218	909650	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	931832	+	BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1	0.0	
chr22	46710138	46710301	reg1002388.p1	4.840	+	NM_016426 BC075828 AK303087 AK025563 AK222806 AK315550 TSC_hg19_v1_chr22_+_46692850	-17464	+	TSC_hg19_v1_chr22_+_46663916 AK000706 BC018918 CU676334	-46304	+	TSC_hg19_v1_chr22_+_46663880 NM_017931 AK300606	-46361	+	NM_018006 AY062123 DQ309998 DQ309999 DQ310000	21090	+	TSC_hg19_v1_chr22_+_46731615 AB178028 AK001002 AK295173 AK290712 BC066593 BC080631 CR456445 BC027991 BC012076 AB463324 CU013043 CU013331	21410	+	TSC_hg19_v1_chr22_+_46731810 AK303020	21591	+	NM_016426|GTSE1|51512|G-2 and S-phase expressed 1##BC075828|GTSE1|51512|G-2 and S-phase expressed 1##AK303087|GTSE1|51512|G-2 and S-phase expressed 1##AK025563|GTSE1|51512|G-2 and S-phase expressed 1##AK222806|GTSE1|51512|G-2 and S-phase expressed 1##AK315550|GTSE1|51512|G-2 and S-phase expressed 1##AK000706|TTC38|55020|tetratricopeptide repeat domain 38##BC018918|TTC38|55020|tetratricopeptide repeat domain 38##NM_017931|TTC38|55020|tetratricopeptide repeat domain 38##AK300606|TTC38|55020|tetratricopeptide repeat domain 38##NM_018006|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AY062123|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ309998|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ309999|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ310000|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AB178028|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK001002|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK295173|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK290712|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC066593|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC080631|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456445|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC027991|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC012076|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013043|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013331|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK303020|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	0.0	
chr2	37641977	37642112	reg1000118.p2	4.840	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-70231	+	BC030706 BC012820 AB015982 NM_005813	-97851	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-183198	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	256735	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	257345	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	510388	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.0	
chr4	81282599	81282754	reg1034414.p1	4.840	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-25779	+	NM_004464 NM_033143 AK312065 TSC_hg19_v1_chr4_+_81187819 AK291962 AF535149 AF171928 M37825 BC131502 BC074858 BC074859 AB016517 AB463636 AF355187	-94817	+	TSC_hg19_v1_chr4_+_81118656 NM_001099403 BC071584 AK292137 BC027929	-164022	+	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	669466	+	AB528214 D70899 NM_006259 X94612	843531	-	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	1110307	-	BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##NM_004464|FGF5|2250|fibroblast growth factor 5##NM_033143|FGF5|2250|fibroblast growth factor 5##AK312065|FGF5|2250|fibroblast growth factor 5##AK291962|FGF5|2250|fibroblast growth factor 5##AF535149|FGF5|2250|fibroblast growth factor 5##AF171928|FGF5|2250|fibroblast growth factor 5##M37825|FGF5|2250|fibroblast growth factor 5##BC131502|FGF5|2250|fibroblast growth factor 5##BC074858|FGF5|2250|fibroblast growth factor 5##BC074859|FGF5|2250|fibroblast growth factor 5##AB016517|FGF5|2250|fibroblast growth factor 5##AF355187|FGF5|2250|fibroblast growth factor 5##NM_001099403|PRDM8|56978|PR domain containing 8##BC071584|PRDM8|56978|PR domain containing 8##AK292137|PRDM8|56978|PR domain containing 8##BC027929|PRDM8|56978|PR domain containing 8##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B	0.74952	CTCF.p2:-15:0.750
chr10	72824294	72824403	reg1026563.p2	4.839	+	NM_000281	-175808	-	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	-176046	-	TSC_hg19_v1_chr10_+_72575751 AB033078 AJ011304	-248593	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	148032	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	254677	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	254698	+	NM_000281|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AB033078|SGPL1|8879|sphingosine-1-phosphate lyase 1##AJ011304|SGPL1|8879|sphingosine-1-phosphate lyase 1##AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3	0.839394	CTCF.p2:-6:0.839
chr1	22282048	22282134	reg1034298.p1	4.839	+	TSC_hg19_v1_chr1_-_22263804 X62515 NM_005529 M85289	-18325	-	AK127275 NM_001013693 BC146860	-143285	+	TSC_hg19_v1_chr1_-_22109701 AK026930 NM_001032730 NM_032236	-172392	-	NM_007352 AK092382 AK308518 AX747509 BC005216 M18692 AK315798 AK308510 M16630	21388	+	BC005918 BC015103 D00306 NM_005747 BC007028 AK225620 AK308514 BC008383 CU675183 CU678941 DQ893182 DQ896490	46066	+	TSC_hg19_v1_chr1_+_22352003 AF161506 BC016053	69921	+	X62515|HSPG2|3339|heparan sulfate proteoglycan 2##NM_005529|HSPG2|3339|heparan sulfate proteoglycan 2##M85289|HSPG2|3339|heparan sulfate proteoglycan 2##AK127275|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001013693|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##BC146860|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001032730|USP48|84196|ubiquitin specific peptidase 48##NM_032236|USP48|84196|ubiquitin specific peptidase 48##NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B##M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A##M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B##BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A##D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AF161506|LINC00339|29092|long intergenic non-protein coding RNA 339##BC016053|LINC00339|29092|long intergenic non-protein coding RNA 339	0.018091	
chr15	33606287	33606390	reg1028522.p1	4.839	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	-3169	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-246103	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-595172	-	TSC_hg19_v1_chr15_-_34212524 BC037796	606220	-	AK095198 NM_012125	654750	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	724974	-	AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor	0.035233	
chr19	5322337	5322518	reg1015271.p2	4.839	+	TSC_hg19_v1_chr19_+_5032899 CU687848	-289528	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-353254	+	NM_015015 TSC_hg19_v1_chr19_+_4969124	-353303	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	18367	-	AK098722 NM_181710 AK292251 BC017592	132999	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	300331	-	AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##NM_015015|KDM4B|23030|lysine (K)-specific demethylase 4B##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2	0.0	
chr3	126704038	126704149	reg1029277.p2	4.839	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-281016	+	TSC_hg19_v1_chr3_-_126373968 NM_001173513 NM_052883	-330117	-	TSC_hg19_v1_chr3_-_126373947 AK299502 BC030028 BC050032	-330179	-	AB385178 NM_032242 X87832	3347	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	207901	+	AB037108 NM_016372	595186	-	AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_001173513|TXNRD3|114112|thioredoxin reductase 3##NM_052883|TXNRD3|114112|thioredoxin reductase 3##AK299502|TXNRD3|114112|thioredoxin reductase 3##BC030028|TXNRD3|114112|thioredoxin reductase 3##BC050032|TXNRD3|114112|thioredoxin reductase 3##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	0.227055	
chr4	103748761	103748851	reg1030292.p1	4.839	+	TSC_hg19_v1_chr4_-_103748709 BC066917 NM_181887 NM_181891 AL833414	-120	-	AK095822 TSC_hg19_v1_chr4_-_103748316 NM_181892	-510	-	NM_005908 TSC_hg19_v1_chr4_-_103682152	-66642	-	TSC_hg19_v1_chr4_-_103748970 BC037894 NM_003340 NM_181886 NM_181888 BC003395 AK315775 NM_181889	330	-	NM_181893 NM_181890	41210	-	TSC_hg19_v1_chr4_+_103790148 NM_001008388	41346	+	BC066917|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181887|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181891|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##AL833414|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##AK095822|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181892|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_005908|MANBA|4126|mannosidase, beta A, lysosomal##BC037894|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_003340|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181886|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181888|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##BC003395|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##AK315775|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181889|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181893|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181890|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_001008388|CISD2|493856|CDGSH iron sulfur domain 2	0.0	
chr6	16592155	16592335	reg1024689.p2	4.839	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-353394	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-448935	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-462808	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	169452	-	NM_001190766	510243	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	689609	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.0	
chr7	8009531	8009712	reg1026728.p5	4.839	+	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	-1188	+	BC009868 NM_002947	-251384	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-329248	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	292095	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	292170	-	TSC_hg19_v1_chr7_-_8302174 U38260 L01100 BC008640 BC005922 NM_004968	292552	-	NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa##U38260|ICA1|3382|islet cell autoantigen 1, 69kDa##L01100|ICA1|3382|islet cell autoantigen 1, 69kDa##BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa##BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr12	3312091	3312271	reg1004517.p1	4.838	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-125619	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-243120	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-243587	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	288260	+	AK125333 TSC_hg19_v1_chr12_-_3601984	289804	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	550087	-	NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B	0.0	
chr12	50055104	50055238	reg1027953.p2	4.838	+	BC067364 NM_001031698	-30845	+	TSC_hg19_v1_chr12_+_50017344 AK123353 BC050398 AL834216 NM_012272	-37800	+	AM393365 AL136748 BC035621 AK302702 AK093242 AX748009 NM_032130	-55826	-	AB384661 TSC_hg19_v1_chr12_-_50101046	45839	-	TSC_hg19_v1_chr12_-_50101189 AK128195	45987	-	TSC_hg19_v1_chr12_-_50101206 AB095934 BC159100 NM_175736 NM_198900	46041	-	BC067364|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_001031698|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AK123353|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##BC050398|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AL834216|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_012272|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AM393365|FAM186B|84070|family with sequence similarity 186, member B##AL136748|FAM186B|84070|family with sequence similarity 186, member B##BC035621|FAM186B|84070|family with sequence similarity 186, member B##AK302702|FAM186B|84070|family with sequence similarity 186, member B##AK093242|FAM186B|84070|family with sequence similarity 186, member B##NM_032130|FAM186B|84070|family with sequence similarity 186, member B##AK128195|FMNL3|91010|formin-like 3##AB095934|FMNL3|91010|formin-like 3##BC159100|FMNL3|91010|formin-like 3##NM_175736|FMNL3|91010|formin-like 3##NM_198900|FMNL3|91010|formin-like 3	0.0	
chr14	69208751	69208879	reg1027754.p2	4.838	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-922295	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-925516	-	AK315462 NM_152443	-1040213	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	50905	-	NM_001244698 NM_004926	51815	-	NM_001244701 AB528867	54169	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr16	81294742	81294898	reg1029736.p1	4.838	+	AK296011 AF294900 AK001592 BC022269 NM_017429 BC126210 BC126212 HQ258298	-22417	+	AY164483 NM_001076780 NM_052892	-40846	-	BT009827 CR457072 AK311978 M69175 BC000790 BC009065 BC020922 TSC_hg19_v1_chr16_-_81130001 D00723 NM_004483	-164867	-	TSC_hg19_v1_chr16_+_81348566 AK095378 NM_022041 AF291673	53749	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	53830	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	184013	+	AK296011|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##AF294900|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##AK001592|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC022269|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##NM_017429|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC126210|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##BC126212|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##HQ258298|BCMO1|53630|beta-carotene 15,15'-monooxygenase 1##AY164483|PKD1L2|114780|polycystic kidney disease 1-like 2##NM_001076780|PKD1L2|114780|polycystic kidney disease 1-like 2##NM_052892|PKD1L2|114780|polycystic kidney disease 1-like 2##BT009827|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##CR457072|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##AK311978|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##M69175|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##BC000790|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##BC009065|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##BC020922|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##D00723|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##NM_004483|GCSH|2653|glycine cleavage system protein H (aminomethyl carrier)##AK095378|GAN|8139|gigaxonin##NM_022041|GAN|8139|gigaxonin##AF291673|GAN|8139|gigaxonin##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein	0.309775	CTCF.p2:28:0.310
chr1	70578681	70578785	reg1030139.p1	4.838	+	AF434715 NM_020794 BC128989 CR749629	-352851	+	TSC_hg19_v1_chr1_+_70034033 AF498274	-544653	+	AK294206 TSC_hg19_v1_chr1_+_70033988	-544762	+	BC003407 CU678999 TSC_hg19_v1_chr1_-_70671236 BC008586	92477	-	TSC_hg19_v1_chr1_-_70671263 AK022951 NM_017768	92578	-	TSC_hg19_v1_chr1_+_70671371 BC022815 NM_001190987 NM_004768	92618	+	AF434715|LRRC7|57554|leucine rich repeat containing 7##NM_020794|LRRC7|57554|leucine rich repeat containing 7##BC128989|LRRC7|57554|leucine rich repeat containing 7##CR749629|LRRC7|57554|leucine rich repeat containing 7##AF498274|LRRC7|57554|leucine rich repeat containing 7##BC003407|LRRC40|55631|leucine rich repeat containing 40##BC008586|LRRC40|55631|leucine rich repeat containing 40##AK022951|LRRC40|55631|leucine rich repeat containing 40##NM_017768|LRRC40|55631|leucine rich repeat containing 40##BC022815|SRSF11|9295|serine/arginine-rich splicing factor 11##NM_001190987|SRSF11|9295|serine/arginine-rich splicing factor 11##NM_004768|SRSF11|9295|serine/arginine-rich splicing factor 11	0.0	
chr3	185986980	185987104	reg1029480.p1	4.838	+	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	-160186	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	-160696	-	TSC_hg19_v1_chr3_-_185655843 AK315632 NM_001243879 NM_004593	-331164	-	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	92892	-	CU686840 AF161703 BC069478 AK314172 NM_017541	275098	-	TSC_hg19_v1_chr3_-_186285118 AK001422 BC025748	298066	-	BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AF161703|CRYGS|1427|crystallin, gamma S##BC069478|CRYGS|1427|crystallin, gamma S##AK314172|CRYGS|1427|crystallin, gamma S##NM_017541|CRYGS|1427|crystallin, gamma S##AK001422|TBCCD1|55171|TBCC domain containing 1##BC025748|TBCCD1|55171|TBCC domain containing 1	0.761042	CTCF.p2:9:0.761
chr5	96761366	96761478	reg1029936.p2	4.838	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-242435	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-242480	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	-242514	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	1343619	+	BC054860 BC117134 NM_001270 AF006513	1500806	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	3109651	+	NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A	0.286253	CTCF.p2:-11:0.286
chr7	113950576	113950696	reg1026731.p1	4.838	+	TSC_hg19_v1_chr7_+_113726599 CR749236	-224033	+	TSC_hg19_v1_chr7_+_113726514 AF454830	-224133	+	TSC_hg19_v1_chr7_+_113726381 AK131266	-224215	+	TSC_hg19_v1_chr7_+_114055117 AY144615 BC018016 NM_001172766 NM_014491 NM_148898 NM_148900	104461	+	AK296957 TSC_hg19_v1_chr7_+_114055213	104556	+	TSC_hg19_v1_chr7_+_114055253 AF493430 AF337817 AF467257 BC126104 BC143866 BC143867	104669	+	CR749236|FOXP2|93986|forkhead box P2##AF454830|FOXP2|93986|forkhead box P2##AK131266|FOXP2|93986|forkhead box P2##AY144615|FOXP2|93986|forkhead box P2##BC018016|FOXP2|93986|forkhead box P2##NM_001172766|FOXP2|93986|forkhead box P2##NM_014491|FOXP2|93986|forkhead box P2##NM_148898|FOXP2|93986|forkhead box P2##NM_148900|FOXP2|93986|forkhead box P2##AK296957|FOXP2|93986|forkhead box P2##AF493430|FOXP2|93986|forkhead box P2##AF337817|FOXP2|93986|forkhead box P2##AF467257|FOXP2|93986|forkhead box P2##BC126104|FOXP2|93986|forkhead box P2##BC143866|FOXP2|93986|forkhead box P2##BC143867|FOXP2|93986|forkhead box P2	0.150725	
chr9	95748578	95748675	reg1030882.p2	4.838	+	NM_033086 BX647829 BC111054 AY211386	-11877	+	NM_001083536	-39026	+	AK299274 TSC_hg19_v1_chr9_-_95640325 AK091203 AX746846 NM_001007101 AL833202 NM_031486 AK292997 AK309617	-108349	-	TSC_hg19_v1_chr9_+_95820982 BC014601 NM_145006	72350	+	TSC_hg19_v1_chr9_+_95821007 CU677063 DQ894024 EU176188 AY358190	72398	+	NM_032310 TSC_hg19_v1_chr9_+_95858498 AK057716 AK091611 AX747094 BC042201 BC038856 BC004500	109854	+	NM_033086|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BX647829|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BC111054|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AY211386|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##NM_001083536|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AK299274|ZNF484|83744|zinc finger protein 484##AK091203|ZNF484|83744|zinc finger protein 484##NM_001007101|ZNF484|83744|zinc finger protein 484##AL833202|ZNF484|83744|zinc finger protein 484##NM_031486|ZNF484|83744|zinc finger protein 484##AK292997|ZNF484|83744|zinc finger protein 484##AK309617|ZNF484|83744|zinc finger protein 484##BC014601|SUSD3|203328|sushi domain containing 3##NM_145006|SUSD3|203328|sushi domain containing 3##DQ894024|SUSD3|203328|sushi domain containing 3##EU176188|SUSD3|203328|sushi domain containing 3##AY358190|SUSD3|203328|sushi domain containing 3##NM_032310|C9orf89|84270|chromosome 9 open reading frame 89##AK057716|C9orf89|84270|chromosome 9 open reading frame 89##AK091611|C9orf89|84270|chromosome 9 open reading frame 89##BC042201|C9orf89|84270|chromosome 9 open reading frame 89##BC038856|C9orf89|84270|chromosome 9 open reading frame 89##BC004500|C9orf89|84270|chromosome 9 open reading frame 89	0.811434	CTCF.p2:13:0.811
chrX	45181720	45181860	reg1027368.p1	4.838	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	-121677	-	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-449354	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-478477	+	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	1124921	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	1223066	-	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	1223154	+	BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588	0.577095	CTCF.p2:11:0.577
chr18	8480642	8480741	reg1030283.p2	4.837	+	TSC_hg19_v1_chr18_+_7946885 AK294492	-533785	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	-913374	+	NM_001105581	-1249555	+	TSC_hg19_v1_chr18_+_8609434 BC071600 BC098407 BC050338 NM_001025300	128745	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	129055	+	AK131528 NM_015210	236677	+	AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##BC071600|RAB12|201475|RAB12, member RAS oncogene family##BC098407|RAB12|201475|RAB12, member RAS oncogene family##BC050338|RAB12|201475|RAB12, member RAS oncogene family##NM_001025300|RAB12|201475|RAB12, member RAS oncogene family##AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165	0.268476	CTCF.p2:-12:0.268
chr2	113184962	113185093	reg1030739.p1	4.837	+	TSC_hg19_v1_chr2_+_113033193 AK131416	-151825	+	TSC_hg19_v1_chr2_+_113033173 NM_198581	-151866	+	BC032001 AK315329 AF334161 NM_032494	-172395	-	NM_005054 U64675 NM_001164463	6136	-	TSC_hg19_v1_chr2_+_113239732 BC036819	54699	+	TSC_hg19_v1_chr2_+_113239762 NM_153712	54739	+	AK131416|ZC3H6|376940|zinc finger CCCH-type containing 6##NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6##BC032001|ZC3H8|84524|zinc finger CCCH-type containing 8##AK315329|ZC3H8|84524|zinc finger CCCH-type containing 8##AF334161|ZC3H8|84524|zinc finger CCCH-type containing 8##NM_032494|ZC3H8|84524|zinc finger CCCH-type containing 8##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001164463|RGPD8|727851|RANBP2-like and GRIP domain containing 8##BC036819|TTL|150465|tubulin tyrosine ligase##NM_153712|TTL|150465|tubulin tyrosine ligase	0.578776	CTCF.p2:2:0.579
chr2	46720832	46721013	reg1029553.p2	4.837	+	NM_001145051	-14219	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	-195947	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	-196331	+	BC034808 NM_080653	26173	-	TSC_hg19_v1_chr2_+_46769874 NM_012249 AK095329	48927	+	TSC_hg19_v1_chr2_+_46769905 BC056154 BC070485 BC065291 BC093805 BC101806 AF498976 M31470 AB528045	49116	+	NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##BC034808|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_080653|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_012249|RHOQ|23433|ras homolog gene family, member Q##AK095329|RHOQ|23433|ras homolog gene family, member Q##BC056154|RHOQ|23433|ras homolog gene family, member Q##BC070485|RHOQ|23433|ras homolog gene family, member Q##BC065291|RHOQ|23433|ras homolog gene family, member Q##BC093805|RHOQ|23433|ras homolog gene family, member Q##BC101806|RHOQ|23433|ras homolog gene family, member Q##AF498976|RHOQ|23433|ras homolog gene family, member Q##M31470|RHOQ|23433|ras homolog gene family, member Q	0.0	
chr6	89339656	89339766	reg1030487.p2	4.837	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-463945	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-484675	-	BC029488 NM_030960 AF203447	-582181	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	333480	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	333597	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	333636	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.0	
chr11	132952883	132952977	reg1012562.p2	4.836	+	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-139325	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-139916	-	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1171591	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	449384	-	AF521713 AK098717 NM_174927 BC058039	762451	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	873952	-	AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B	0.997937	CTCF.p2:-49:0.998
chr12	78540190	78540290	reg1027055.p1	4.836	+	NM_014903 AJ488201	-315108	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-1080951	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-1267457	-	AK094616 NM_001135805	717532	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	718235	+	TSC_hg19_v1_chr12_+_79258517 BX647240	718296	+	NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I##BX647240|SYT1|6857|synaptotagmin I	0.987189	CTCF.p2:11:0.987
chr13	31191681	31191785	reg1026111.p1	4.836	+	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	-106	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	-151675	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	-151740	-	NM_005800 BC038103 TSC_hg19_v1_chr13_+_31192056 BC036027 AK289826 CR627370 X59131 BC012594 AL832776	230	+	AK314143 NM_001204406	95881	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	117931	+	CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##NM_005800|USPL1|10208|ubiquitin specific peptidase like 1##BC038103|USPL1|10208|ubiquitin specific peptidase like 1##BC036027|USPL1|10208|ubiquitin specific peptidase like 1##AK289826|USPL1|10208|ubiquitin specific peptidase like 1##CR627370|USPL1|10208|ubiquitin specific peptidase like 1##X59131|USPL1|10208|ubiquitin specific peptidase like 1##BC012594|USPL1|10208|ubiquitin specific peptidase like 1##AL832776|USPL1|10208|ubiquitin specific peptidase like 1##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein	0.0	
chr13	52534005	52534134	reg1029051.p1	4.836	+	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	-97875	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	-155794	-	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-375334	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	51481	-	TSC_hg19_v1_chr13_+_52586546 NM_001004127 BC142998 AK296747 AK092428 AX747540 BC108677 BC111022 AK025456 BC143059 BC150316	52466	+	BC073862 D87455 NM_021645	64683	+	AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)##NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)	0.51549	CTCF.p2:42:0.515
chr16	58768218	58768333	reg1027611.p1	4.836	+	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-78	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-49619	-	TSC_hg19_v1_chr16_-_58663742 BC040523 AL833549 NM_016284 NM_206999	-104530	-	AK124734 NM_001796	3302463	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	6387627	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	6387693	-	DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.014666	
chr17	27570871	27570976	reg1026225.p2	4.836	+	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	-63573	-	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	-103512	-	AK054958 NM_004740	-168297	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	2954	+	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	50187	-	TSC_hg19_v1_chr17_-_27621167 AK293075 NM_020772	50242	-	CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2	0.793131	CTCF.p2:-4:0.651
chr19	17337105	17337199	reg1027513.p1	4.836	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	-118	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	-10947	+	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	-10980	+	AB307712 AB463945 AK298764 HQ692851 TSC_hg19_v1_chr19_-_17356214 BC063018 BC084544 BC002669 NM_005234 AK314961	18988	-	AB026290 AB040046 AK300617 AK096028 BC027910 NM_031941 AK315239 AK292031	38395	-	TSC_hg19_v1_chr19_+_17378251 AK308590 AK299493 NM_001033549 NM_014173 AF161491 AK025970 AK301193 BC006244 AL136692 AK225047	41053	+	BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB307712|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AK298764|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##HQ692851|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC063018|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC084544|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC002669|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##NM_005234|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AK314961|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1##AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1##AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1##AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1##BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1##NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1##AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1##AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1##AK308590|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK299493|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_001033549|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_014173|BABAM1|29086|BRISC and BRCA1 A complex member 1##AF161491|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK025970|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK301193|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC006244|BABAM1|29086|BRISC and BRCA1 A complex member 1##AL136692|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK225047|BABAM1|29086|BRISC and BRCA1 A complex member 1	0.120829	
chr1	104003929	104004043	reg1028537.p1	4.835	+	NM_001190709 NM_001854 NM_080629 NM_080630 TSC_hg19_v1_chr1_-_103574051	-429935	-	J04177 TSC_hg19_v1_chr1_-_103574032 BC117697	-430015	-	AB208844 TSC_hg19_v1_chr1_-_103496798	-507203	-	AK289844 TSC_hg19_v1_chr1_+_104068344 AB058742	64345	+	TSC_hg19_v1_chr1_+_104068567 NM_017619 AY099329 AK057799 BC010697 AB463239	64643	+	NM_020978	93335	+	NM_001190709|COL11A1|1301|collagen, type XI, alpha 1##NM_001854|COL11A1|1301|collagen, type XI, alpha 1##NM_080629|COL11A1|1301|collagen, type XI, alpha 1##NM_080630|COL11A1|1301|collagen, type XI, alpha 1##J04177|COL11A1|1301|collagen, type XI, alpha 1##BC117697|COL11A1|1301|collagen, type XI, alpha 1##AB208844|COL11A1|1301|collagen, type XI, alpha 1##AK289844|RNPC3|55599|RNA-binding region (RNP1, RRM) containing 3##NM_017619|RNPC3|55599|RNA-binding region (RNP1, RRM) containing 3##AY099329|RNPC3|55599|RNA-binding region (RNP1, RRM) containing 3##AK057799|RNPC3|55599|RNA-binding region (RNP1, RRM) containing 3##BC010697|RNPC3|55599|RNA-binding region (RNP1, RRM) containing 3##NM_020978|AMY2B|280|amylase, alpha 2B (pancreatic)	0.92443	CTCF.p2:19:0.924
chr1	2231915	2232046	reg1029472.p1	4.835	+	NM_003036 X15218 TSC_hg19_v1_chr1_+_2160159	-71811	+	AK127994 NM_001146310	-92809	-	TSC_hg19_v1_chr1_-_2126212 BC041041 AF469129 BC066360 AK055593 BC103992 NM_182533	-105801	-	TSC_hg19_v1_chr1_-_2322994 AK024003 NM_024848	91012	-	TSC_hg19_v1_chr1_-_2322997 AK299217 AK310323 BC021704	91090	-	TSC_hg19_v1_chr1_+_2323265 NM_007033 AF157324	91255	+	NM_003036|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##X15218|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##AK127994|C1orf86|199990|chromosome 1 open reading frame 86##NM_001146310|C1orf86|199990|chromosome 1 open reading frame 86##BC041041|C1orf86|199990|chromosome 1 open reading frame 86##AF469129|C1orf86|199990|chromosome 1 open reading frame 86##BC066360|C1orf86|199990|chromosome 1 open reading frame 86##AK055593|C1orf86|199990|chromosome 1 open reading frame 86##BC103992|C1orf86|199990|chromosome 1 open reading frame 86##NM_182533|C1orf86|199990|chromosome 1 open reading frame 86##AK024003|MORN1|79906|MORN repeat containing 1##NM_024848|MORN1|79906|MORN repeat containing 1##AK299217|MORN1|79906|MORN repeat containing 1##AK310323|MORN1|79906|MORN repeat containing 1##BC021704|MORN1|79906|MORN repeat containing 1##NM_007033|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##AF157324|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)	0.0	
chr13	33225049	33225132	reg1024640.p1	4.835	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-64407	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-64451	+	TSC_hg19_v1_chr13_+_33160610 AL137201	-64472	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	365433	+	AY082590 BC046563 NM_001243466 NM_178007	535125	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	555074	-	BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.967137	CTCF.p2:-19:0.967
chr14	22386176	22386303	reg1030481.p1	4.835	+	AB463964 NM_001001912 AY726598	-252917	+	NM_001005466 AB529274 BC137371 BC137382	-283193	-	AB528817 NM_001005465	-347365	-	X58763 TSC_hg19_v1_chr14_+_22989364	603110	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	671847	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	671895	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.999384	CTCF.p2:-32:0.999
chr18	45458213	45458342	reg1030176.p1	4.835	+	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	-788	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	-1062	-	BC014840 NM_005901	-1352	-	AM988836 AK296709 NM_001039360 EF120357	205422	-	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	477432	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	607496	+	NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor	0.05368	
chr18	45938859	45938988	reg1029929.p2	4.835	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-3214	-	AM988836 AK296709 NM_001039360 EF120357	-275224	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	-481434	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	126850	+	AK131394 NM_001190823	530224	-	AK301535 NM_001190822	536779	-	AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7	0.0	
chr2	143044317	143044434	reg1030982.p1	4.835	+	AF176832 NM_018557	-155106	-	TSC_hg19_v1_chr2_-_142888540 AK054663	-155819	-	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-3506569	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	590831	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	590865	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	842555	+	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15	0.402564	CTCF.p2:-8:0.392
chr4	68737733	68737857	reg1029171.p1	4.835	+	NM_000406 NM_001012763	-115992	-	TSC_hg19_v1_chr4_-_68566867 AL832015 AL832458 AK094969 AK314371 BC031637 BC126484 BC126486 NM_018227	-170924	-	TSC_hg19_v1_chr4_-_68566842 AB014773 AB463334 AM392673 EF623993	-170977	-	AK296853 BC125195 BC125196 AB002134 NM_004262 AK290289	11912	-	AY498712 BC111796 AK292950 AF071882 AK131518 NM_001114387 NM_182606	91392	-	AK122625 NM_207407	257791	-	NM_000406|GNRHR|2798|gonadotropin-releasing hormone receptor##NM_001012763|GNRHR|2798|gonadotropin-releasing hormone receptor##AL832015|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AL832458|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK094969|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK314371|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC031637|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC126484|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC126486|UBA6|55236|ubiquitin-like modifier activating enzyme 6##NM_018227|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AB014773|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AM392673|UBA6|55236|ubiquitin-like modifier activating enzyme 6##EF623993|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK296853|TMPRSS11D|9407|transmembrane protease, serine 11D##BC125195|TMPRSS11D|9407|transmembrane protease, serine 11D##BC125196|TMPRSS11D|9407|transmembrane protease, serine 11D##AB002134|TMPRSS11D|9407|transmembrane protease, serine 11D##NM_004262|TMPRSS11D|9407|transmembrane protease, serine 11D##AK290289|TMPRSS11D|9407|transmembrane protease, serine 11D##AY498712|TMPRSS11A|339967|transmembrane protease, serine 11A##BC111796|TMPRSS11A|339967|transmembrane protease, serine 11A##AK292950|TMPRSS11A|339967|transmembrane protease, serine 11A##AF071882|TMPRSS11A|339967|transmembrane protease, serine 11A##AK131518|TMPRSS11A|339967|transmembrane protease, serine 11A##NM_001114387|TMPRSS11A|339967|transmembrane protease, serine 11A##NM_182606|TMPRSS11A|339967|transmembrane protease, serine 11A##AK122625|TMPRSS11F|389208|transmembrane protease, serine 11F##NM_207407|TMPRSS11F|389208|transmembrane protease, serine 11F	0.896296	CTCF.p2:-3:0.896
chr8	91013438	91013619	reg1013477.p2	4.835	+	TSC_hg19_v1_chr8_-_90996896 AK001017 AK289848 BC071590 BC040519 BX640816 NM_002485 AK312410	-16624	-	TSC_hg19_v1_chr8_-_90996804 AB528582 BC143065 BC143066 BC108650 BC016762 BC005293 AF058696 AF051334 AK223256 BC146797 BC136802 BC136803 BC144413	-16696	-	BC031054 NM_001126111 TSC_hg19_v1_chr8_+_90914816	-98734	+	NM_001359 BC105080 BC105082 BC143669 TSC_hg19_v1_chr8_+_91013704 AK300069 L26050	121	+	AB529128 X06661 BC006478 AK054881 AK312491 BC020864 NM_004929	81487	-	AK300583 AK123958 AL834364 TSC_hg19_v1_chr8_-_91657856	644270	-	AK001017|NBN|4683|nibrin##AK289848|NBN|4683|nibrin##BC071590|NBN|4683|nibrin##BC040519|NBN|4683|nibrin##BX640816|NBN|4683|nibrin##NM_002485|NBN|4683|nibrin##AK312410|NBN|4683|nibrin##BC143065|NBN|4683|nibrin##BC143066|NBN|4683|nibrin##BC108650|NBN|4683|nibrin##BC016762|NBN|4683|nibrin##BC005293|NBN|4683|nibrin##AF058696|NBN|4683|nibrin##AF051334|NBN|4683|nibrin##AK223256|NBN|4683|nibrin##BC146797|NBN|4683|nibrin##BC136802|NBN|4683|nibrin##BC136803|NBN|4683|nibrin##BC144413|NBN|4683|nibrin##BC031054|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_001126111|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_001359|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105080|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105082|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC143669|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK300069|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##L26050|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##X06661|CALB1|793|calbindin 1, 28kDa##BC006478|CALB1|793|calbindin 1, 28kDa##AK054881|CALB1|793|calbindin 1, 28kDa##AK312491|CALB1|793|calbindin 1, 28kDa##BC020864|CALB1|793|calbindin 1, 28kDa##NM_004929|CALB1|793|calbindin 1, 28kDa##AK300583|TMEM64|169200|transmembrane protein 64##AK123958|TMEM64|169200|transmembrane protein 64##AL834364|TMEM64|169200|transmembrane protein 64	0.035444	
chr9	131410685	131410782	reg1029803.p2	4.835	+	TSC_hg19_v1_chr9_+_131388703 AK309836 AK310696	-21990	+	X86901 TSC_hg19_v1_chr9_+_131388179	-22555	+	TSC_hg19_v1_chr9_+_131314868 NM_001130438 NM_001195532 NM_003127 AK294753 AK300386 AK307676 BC034956 AB191262 AB209860 BC051801 J05243 BC053521 U83867	-95943	+	TSC_hg19_v1_chr9_-_131418938 BC001614	8230	-	TSC_hg19_v1_chr9_-_131419024 BC011874 NM_052844	8333	-	NM_001122821 TSC_hg19_v1_chr9_+_131446071 AK300794	35271	+	AK309836|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AK310696|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##X86901|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##NM_001130438|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##NM_001195532|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##NM_003127|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AK294753|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AK300386|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AK307676|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##BC034956|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AB191262|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AB209860|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##BC051801|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##J05243|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##BC053521|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##U83867|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##BC001614|WDR34|89891|WD repeat domain 34##BC011874|WDR34|89891|WD repeat domain 34##NM_052844|WDR34|89891|WD repeat domain 34##NM_001122821|SET|6418|SET nuclear oncogene##AK300794|SET|6418|SET nuclear oncogene	0.958022	CTCF.p2:-28:0.958
chrX	68713167	68713296	reg1030761.p1	4.835	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	-327925	-	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	-664376	+	TSC_hg19_v1_chrX_+_67913490 D80011	-799740	+	AF087142 NM_015686 BC136518 BC136519	11852	+	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	122704	+	AB528121 AY605053 NM_001002254	556553	-	AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B##AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A##AY605053|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##NM_001002254|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2	0.034176	
chr10	124892830	124893010	reg1002640.p2	4.834	+	TSC_hg19_v1_chr10_+_124768521 BC013756 U12778 AK314241 AB527625 CU680672 AL831821	-124392	+	TSC_hg19_v1_chr10_+_124768471 NM_001609 AK298638	-124472	+	CR749800 TSC_hg19_v1_chr10_-_124768312 AK226143 AK026626 NM_022466 BX647958 BC022564	-124649	-	NM_001105574 TSC_hg19_v1_chr10_+_124895620	2673	+	NM_005519	14717	+	NM_001007793 NM_004725 TSC_hg19_v1_chr10_+_124913846	20885	+	BC013756|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##U12778|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK314241|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AL831821|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##NM_001609|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK298638|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##CR749800|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##AK226143|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##AK026626|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##NM_022466|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##BX647958|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##BC022564|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##NM_001105574|HMX3|340784|H6 family homeobox 3##NM_005519|HMX2|3167|H6 family homeobox 2##NM_001007793|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##NM_004725|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)	0.0	
chr11	43594936	43595057	reg1025818.p1	4.834	+	TSC_hg19_v1_chr11_+_43380492 AK001752 BC017238 BC033000	-214504	+	TSC_hg19_v1_chr11_+_43380403 NM_018259	-214578	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	-261356	+	TSC_hg19_v1_chr11_+_43665785 AK095484	70788	+	NM_016142 TSC_hg19_v1_chr11_+_43702287 AK027882 AK075011 AK292625 AK075216 AK074952 AF078850 BC012043 AK222881 AK301663 BC012536 EU176708	107262	+	TSC_hg19_v1_chr11_+_43902380 NM_139178 AK315266 AB042029 BC067257	307397	+	AK001752|TTC17|55761|tetratricopeptide repeat domain 17##BC017238|TTC17|55761|tetratricopeptide repeat domain 17##BC033000|TTC17|55761|tetratricopeptide repeat domain 17##NM_018259|TTC17|55761|tetratricopeptide repeat domain 17##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5##NM_016142|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK027882|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075011|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK292625|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075216|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK074952|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AF078850|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012043|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK222881|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK301663|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012536|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##EU176708|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##NM_139178|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AK315266|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AB042029|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##BC067257|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)	0.85035	CTCF.p2:6:0.850
chr1	235159311	235159461	reg1027691.p1	4.834	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-263612	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-414140	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-415528	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	132703	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	132845	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	165177	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.573124	CTCF.p2:-64:0.573
chr14	59978745	59978855	reg1027692.p1	4.834	+	TSC_hg19_v1_chr14_+_59951234 NM_001098625 NM_016475 AF151047 AF161445 AF212245 BC010359 AK027591 BC005198 AK021683 AL136696 BX161501 AK056145 AK298209	-27573	+	AK294843 TSC_hg19_v1_chr14_-_59951127	-27673	-	TSC_hg19_v1_chr14_-_59951106 AK058165 NM_144581 BC012131	-27720	-	NM_001164399	64748	-	CR457030 L10335 TSC_hg19_v1_chr14_-_60097308	118465	-	TSC_hg19_v1_chr14_-_60097342 BC000314 BC003003 AK297492	118544	-	NM_001098625|JKAMP|51528|JNK1/MAPK8-associated membrane protein##NM_016475|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AF151047|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AF161445|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AF212245|JKAMP|51528|JNK1/MAPK8-associated membrane protein##BC010359|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK027591|JKAMP|51528|JNK1/MAPK8-associated membrane protein##BC005198|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK021683|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AL136696|JKAMP|51528|JNK1/MAPK8-associated membrane protein##BX161501|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK056145|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK298209|JKAMP|51528|JNK1/MAPK8-associated membrane protein##AK058165|C14orf149|112849|chromosome 14 open reading frame 149##NM_144581|C14orf149|112849|chromosome 14 open reading frame 149##BC012131|C14orf149|112849|chromosome 14 open reading frame 149##NM_001164399|C14orf38|729665|chromosome 14 open reading frame 38##CR457030|RTN1|6252|reticulon 1##L10335|RTN1|6252|reticulon 1##BC000314|RTN1|6252|reticulon 1##BC003003|RTN1|6252|reticulon 1##AK297492|RTN1|6252|reticulon 1	0.70799	CTCF.p2:14:0.708
chr15	32837413	32837533	reg1031483.p2	4.834	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-514730	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-674530	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-674644	-	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	70289	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	96441	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	172784	+	AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1	0.329839	CTCF.p2:-1:0.330
chr17	72459000	72459091	reg1033267.p1	4.834	+	TSC_hg19_v1_chr17_+_72439191 AK126429	-19840	+	AJ276102 NM_018653	-29210	+	AK075397 AF207989 AK222909 TSC_hg19_v1_chr17_+_72428254 AK000249	-30790	+	NM_007261 AJ224864 BC032352	3493	+	AF020314 TSC_hg19_v1_chr17_+_72462772	3725	+	TSC_hg19_v1_chr17_+_72462821 AF161346 AJ010101 AJ010102 AJ010103 AJ238323 AK309636 BC020681 AB590938 CU689350	3765	+	AK126429|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AJ276102|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_018653|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_007261|CD300A|11314|CD300a molecule##AJ224864|CD300A|11314|CD300a molecule##BC032352|CD300A|11314|CD300a molecule##AF020314|CD300A|11314|CD300a molecule##AF161346|CD300A|11314|CD300a molecule##AJ010101|CD300A|11314|CD300a molecule##AJ010102|CD300A|11314|CD300a molecule##AJ010103|CD300A|11314|CD300a molecule##AJ238323|CD300A|11314|CD300a molecule##AK309636|CD300A|11314|CD300a molecule##BC020681|CD300A|11314|CD300a molecule	0.057516	
chr17	73105791	73105959	reg1025182.p1	4.834	+	TSC_hg19_v1_chr17_+_73084056 BC009684 NM_004695	-21820	+	TSC_hg19_v1_chr17_+_73043325 D79998	-62542	+	TSC_hg19_v1_chr17_+_73043288 BC033329 NM_015353	-62646	+	TSC_hg19_v1_chr17_+_73106069 AK300997 AK310697 BC011728 NM_024585	179	+	TSC_hg19_v1_chr17_-_73127869 CU692564 BC002516 BC022334 BC008183 BC047763 BC017454 AF154829 AK000419 NM_001252377 NM_014595	21982	-	DQ891909 DQ895094 DQ896835 EU176653 CU674698 AF177862 BC001420 TSC_hg19_v1_chr17_-_73150608 AF266846 AK223321 AK312613	44677	-	BC009684|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##NM_004695|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##D79998|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC033329|KCTD2|23510|potassium channel tetramerisation domain containing 2##NM_015353|KCTD2|23510|potassium channel tetramerisation domain containing 2##AK300997|ARMC7|79637|armadillo repeat containing 7##BC011728|ARMC7|79637|armadillo repeat containing 7##NM_024585|ARMC7|79637|armadillo repeat containing 7##BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic##AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic##DQ891909|HN1|51155|hematological and neurological expressed 1##DQ895094|HN1|51155|hematological and neurological expressed 1##DQ896835|HN1|51155|hematological and neurological expressed 1##EU176653|HN1|51155|hematological and neurological expressed 1##AF177862|HN1|51155|hematological and neurological expressed 1##BC001420|HN1|51155|hematological and neurological expressed 1##AF266846|HN1|51155|hematological and neurological expressed 1##AK223321|HN1|51155|hematological and neurological expressed 1##AK312613|HN1|51155|hematological and neurological expressed 1	0.0	
chr19	13373119	13373300	reg1005338.p1	4.834	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-109029	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-111917	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-112070	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	243967	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	469370	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	485510	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.0	
chr2	46106676	46106787	reg1030113.p2	4.834	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-227657	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-268324	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-311603	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	417860	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	418244	+	NM_001145051	599972	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.295207	CTCF.p2:-5:0.274
chr4_gl000194_random	2296	2406	reg1031932.p1	4.834	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.978389	CTCF.p2:0:0.978
chr5	132583691	132583781	reg1028804.p2	4.834	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-150845	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-155333	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-177633	+	TSC_hg19_v1_chr5_-_132948202 AK055684	364463	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	364502	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	720639	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.98827	CTCF.p2:-4:0.988
chrX	30506353	30506468	reg1029771.p2	4.834	+	HQ692832 AB464646 BC011564 NM_000475	-178924	-	NM_177404 BC013772	-241114	+	AK314977 NM_002363 NM_177415 X82539	-244563	+	TSC_hg19_v1_chrX_-_30595884 AK021639 BC020611 NM_025159	89547	-	TSC_hg19_v1_chrX_+_30671493 BC042421 BC071595 NM_000167 NM_001128127 NM_001205019 NM_203391	165084	+	TSC_hg19_v1_chrX_+_30671539 AK313215	165132	+	HQ692832|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##BC011564|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_000475|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_177404|MAGEB1|4112|melanoma antigen family B, 1##BC013772|MAGEB1|4112|melanoma antigen family B, 1##AK314977|MAGEB1|4112|melanoma antigen family B, 1##NM_002363|MAGEB1|4112|melanoma antigen family B, 1##NM_177415|MAGEB1|4112|melanoma antigen family B, 1##X82539|MAGEB1|4112|melanoma antigen family B, 1##AK021639|CXorf21|80231|chromosome X open reading frame 21##BC020611|CXorf21|80231|chromosome X open reading frame 21##NM_025159|CXorf21|80231|chromosome X open reading frame 21##BC042421|GK|2710|glycerol kinase##BC071595|GK|2710|glycerol kinase##NM_000167|GK|2710|glycerol kinase##NM_001128127|GK|2710|glycerol kinase##NM_001205019|GK|2710|glycerol kinase##NM_203391|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase	0.0	
chr13	47566671	47566790	reg1028557.p1	4.833	+	AK314132 BX647777 AK302787 NM_000621 NM_001165947	-95663	-	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	-195415	-	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-439223	+	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1008721	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	1045084	+	TSC_hg19_v1_chr13_-_48612129 AK316271	1045378	-	AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##AK316271|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.0	
chr16	58284155	58284246	reg1023781.p2	4.833	+	TSC_hg19_v1_chr16_+_58283871 AK299066 NM_001142302 NM_014157 AK314300 AL136785 BC126445 BC126447 AF161550 AB462987 AM392831 CR533506 HQ258203	-332	+	DQ893025 DQ896269 AB463465 BC008812 NM_001896	-52489	-	TSC_hg19_v1_chr16_-_58163286 NM_013242	-120890	-	AK302175 AK058068 BC057843 NM_001080492	44714	-	NM_001126129 NM_001126130 NM_022770 TSC_hg19_v1_chr16_+_58426340 AK315622 AK023974 BC014437 BC005879 CR457283	142201	+	NM_020465 TSC_hg19_v1_chr16_+_58497607	213380	+	AK299066|CCDC113|29070|coiled-coil domain containing 113##NM_001142302|CCDC113|29070|coiled-coil domain containing 113##NM_014157|CCDC113|29070|coiled-coil domain containing 113##AK314300|CCDC113|29070|coiled-coil domain containing 113##AL136785|CCDC113|29070|coiled-coil domain containing 113##BC126445|CCDC113|29070|coiled-coil domain containing 113##BC126447|CCDC113|29070|coiled-coil domain containing 113##AF161550|CCDC113|29070|coiled-coil domain containing 113##AM392831|CCDC113|29070|coiled-coil domain containing 113##CR533506|CCDC113|29070|coiled-coil domain containing 113##HQ258203|CCDC113|29070|coiled-coil domain containing 113##DQ893025|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##DQ896269|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##BC008812|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##NM_001896|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##NM_013242|C16orf80|29105|chromosome 16 open reading frame 80##AK302175|PRSS54|221191|protease, serine, 54##AK058068|PRSS54|221191|protease, serine, 54##BC057843|PRSS54|221191|protease, serine, 54##NM_001080492|PRSS54|221191|protease, serine, 54##NM_001126129|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##NM_001126130|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##NM_022770|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##AK315622|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##AK023974|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##BC014437|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##BC005879|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##CR457283|GINS3|64785|GINS complex subunit 3 (Psf3 homolog)##NM_020465|NDRG4|65009|NDRG family member 4	0.0	
chr2	149571408	149571588	reg1029293.p2	4.833	+	NM_015630 AF286904 BC093818 BC093820	-168895	+	TSC_hg19_v1_chr2_+_149402332 AK125789	-169162	+	NM_181742	-792326	-	TSC_hg19_v1_chr2_+_149632795 NM_004522 BC002721 BC025961 AB011103	61298	+	BC017298 TSC_hg19_v1_chr2_+_149632844	61342	+	TSC_hg19_v1_chr2_+_149633176 AB384491	61681	+	NM_015630|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##AF286904|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##BC093818|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##BC093820|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##AK125789|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##NM_181742|ORC4|5000|origin recognition complex, subunit 4##NM_004522|KIF5C|3800|kinesin family member 5C##BC002721|KIF5C|3800|kinesin family member 5C##BC025961|KIF5C|3800|kinesin family member 5C##AB011103|KIF5C|3800|kinesin family member 5C##BC017298|KIF5C|3800|kinesin family member 5C	0.127997	
chr2	210196162	210196268	reg1027346.p2	4.833	+	BC036811 NM_005048 U25128 HQ257935 AY497546	-924554	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-971590	+	TSC_hg19_v1_chr2_+_209131083 AK127769	-1065132	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	92539	+	BC110423 TSC_hg19_v1_chr2_+_210444185	247955	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	248179	+	BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##AK294181|PTH2R|5746|parathyroid hormone 2 receptor##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC110423|MAP2|4133|microtubule-associated protein 2##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2	0.839097	CTCF.p2:0:0.839
chr11	118722801	118722923	reg1028904.p2	4.832	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-60928	-	TSC_hg19_v1_chr11_-_118661865 Z11685	-60983	-	TSC_hg19_v1_chr11_-_118661860 BC026228	-61003	-	AK291512 NM_001716 BC110352 X68149 AB464488	31698	+	NM_032966 X68829	41238	+	AB094091 NM_182557	58750	-	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like	0.0	
chr1	117855244	117855358	reg1027465.p1	4.832	+	AY280972 DQ103757 AB590614 BC074729 AY346100 AY358352 AK026071 AK225413 AK310812 AY442303 BC065717 BX648021 DQ836392 NM_001253850 NM_024626	-101773	-	AK303466 NM_001253849	-108844	-	AK023243 AK222901 BC034943 AY669488 NM_001145635 NM_025188	-190922	-	TSC_hg19_v1_chr1_+_117910083 BC052954 AK307842 NM_006699 BC063300	54792	+	TSC_hg19_v1_chr1_+_118148542 NM_017709	293285	+	TSC_hg19_v1_chr1_+_118148669 AK000209 BC036516 BC131726	293378	+	AY280972|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ103757|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC074729|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY346100|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY358352|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK026071|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK225413|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK310812|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY442303|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC065717|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BX648021|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ836392|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253850|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_024626|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK303466|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253849|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK023243|TRIM45|80263|tripartite motif containing 45##AK222901|TRIM45|80263|tripartite motif containing 45##BC034943|TRIM45|80263|tripartite motif containing 45##AY669488|TRIM45|80263|tripartite motif containing 45##NM_001145635|TRIM45|80263|tripartite motif containing 45##NM_025188|TRIM45|80263|tripartite motif containing 45##BC052954|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##AK307842|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##NM_006699|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC063300|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##NM_017709|FAM46C|54855|family with sequence similarity 46, member C##AK000209|FAM46C|54855|family with sequence similarity 46, member C##BC036516|FAM46C|54855|family with sequence similarity 46, member C##BC131726|FAM46C|54855|family with sequence similarity 46, member C	0.0	
chr19	17080109	17080203	reg1028958.p2	4.832	+	AK075099 TSC_hg19_v1_chr19_-_17014494	-65703	-	AK092632 TSC_hg19_v1_chr19_-_17007756 AK124052	-72408	-	TSC_hg19_v1_chr19_+_16999929 BC074782 AF080214 AY431102	-80221	+	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	57384	-	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	106165	-	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	106437	+	AK075099|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK092632|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AK124052|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC074782|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AF080214|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AY431102|F2RL3|9002|coagulation factor II (thrombin) receptor-like 3##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB	0.713133	CTCF.p2:14:0.713
chr19	951658	951830	reg1030391.p1	4.832	+	TSC_hg19_v1_chr19_+_926038 AY845638 BC060828 NM_005224	-25733	+	TSC_hg19_v1_chr19_+_917306 BC141812 NM_032551 AY253982 BC140825 AB051065 AF343725 AJ309020 AY029541 AY253981 BC111094 EU883577	-34351	+	NM_138774 TSC_hg19_v1_chr19_-_913224	-38520	-	TSC_hg19_v1_chr19_+_984344 NM_024100 BC000040 BC001648 CU674808	32590	+	TSC_hg19_v1_chr19_+_1000312 AY507106 AY507107 NM_138690	48621	+	DQ893224 DQ896554 CU679197 TSC_hg19_v1_chr19_-_1021121 BC008957 DQ005958	69314	-	AY845638|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC060828|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_005224|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC141812|KISS1R|84634|KISS1 receptor##NM_032551|KISS1R|84634|KISS1 receptor##AY253982|KISS1R|84634|KISS1 receptor##BC140825|KISS1R|84634|KISS1 receptor##AB051065|KISS1R|84634|KISS1 receptor##AF343725|KISS1R|84634|KISS1 receptor##AJ309020|KISS1R|84634|KISS1 receptor##AY029541|KISS1R|84634|KISS1 receptor##AY253981|KISS1R|84634|KISS1 receptor##EU883577|KISS1R|84634|KISS1 receptor##NM_138774|R3HDM4|91300|R3H domain containing 4##NM_024100|WDR18|57418|WD repeat domain 18##BC000040|WDR18|57418|WD repeat domain 18##BC001648|WDR18|57418|WD repeat domain 18##AY507106|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##AY507107|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_138690|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##DQ893224|C19orf6|91304|chromosome 19 open reading frame 6##DQ896554|C19orf6|91304|chromosome 19 open reading frame 6##BC008957|C19orf6|91304|chromosome 19 open reading frame 6##DQ005958|C19orf6|91304|chromosome 19 open reading frame 6	0.03257	
chr20	19230308	19230425	reg1026890.p2	4.832	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	-36913	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	-37081	+	NM_001242671	-419528	-	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	636777	+	BC128065 NM_018993 TSC_hg19_v1_chr20_+_19870217 AB060339	639861	+	TSC_hg19_v1_chr20_+_19915762 BC034698 AL136924	685383	+	AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2##BC128065|RIN2|54453|Ras and Rab interactor 2##NM_018993|RIN2|54453|Ras and Rab interactor 2##AB060339|RIN2|54453|Ras and Rab interactor 2##BC034698|RIN2|54453|Ras and Rab interactor 2##AL136924|RIN2|54453|Ras and Rab interactor 2	0.567461	CTCF.p2:-4:0.567
chr22	51066415	51066519	reg1028775.p2	4.832	+	AF218778 NM_016431	-24906	+	TSC_hg19_v1_chr22_+_51039227 AK293580 BC047527 BC009940 AK294265 BC037271 CU679535 EU832803 GQ129402	-27255	+	TSC_hg19_v1_chr22_+_51039124 AF136382 NM_012324	-27338	+	TSC_hg19_v1_chr22_-_51066581 AK092752 X52151 BX648618 BC014210 AK098659 AB448736 AK301098 AK315011 NM_000487 NM_001085425 NM_001085426 NM_001085427 NM_001085428	67	-	AB569469 NM_001080420	46602	+	AK310316 Y00970 NM_001097 CR456366 AB587466 CU012933 CU013221	110176	+	AF218778|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##NM_016431|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AK293580|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##BC047527|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##BC009940|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AK294265|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##BC037271|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##EU832803|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##GQ129402|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AF136382|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##NM_012324|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AK092752|ARSA|410|arylsulfatase A##X52151|ARSA|410|arylsulfatase A##BX648618|ARSA|410|arylsulfatase A##BC014210|ARSA|410|arylsulfatase A##AK098659|ARSA|410|arylsulfatase A##AB448736|ARSA|410|arylsulfatase A##AK301098|ARSA|410|arylsulfatase A##AK315011|ARSA|410|arylsulfatase A##NM_000487|ARSA|410|arylsulfatase A##NM_001085425|ARSA|410|arylsulfatase A##NM_001085426|ARSA|410|arylsulfatase A##NM_001085427|ARSA|410|arylsulfatase A##NM_001085428|ARSA|410|arylsulfatase A##AB569469|SHANK3|85358|SH3 and multiple ankyrin repeat domains 3##NM_001080420|SHANK3|85358|SH3 and multiple ankyrin repeat domains 3##AK310316|ACR|49|acrosin##Y00970|ACR|49|acrosin##NM_001097|ACR|49|acrosin##CR456366|ACR|49|acrosin##CU012933|ACR|49|acrosin##CU013221|ACR|49|acrosin	0.0	
chr4	114276723	114276854	reg1022712.p1	4.832	+	TSC_hg19_v1_chr4_+_114214102 AK294720	-62669	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	-305954	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-537487	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	405493	-	TSC_hg19_v1_chr4_-_114682341 AK294517	405568	-	BC022558 TSC_hg19_v1_chr4_-_114682567	405778	-	AK294720|ANK2|287|ankyrin 2, neuronal##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK294517|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC022558|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.0	
chr7	101705467	101705600	reg1024554.p2	4.832	+	M74099 NM_181552	-244652	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-246324	+	BC002778 NM_138403	-432958	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	222864	+	TSC_hg19_v1_chr7_+_101928431 AB000520	222910	+	NM_001146210	291355	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.0	
chr9	129929232	129929392	reg1026173.p2	4.832	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-44282	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-44350	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-44404	-	NM_032293 AK293732 AK095679	97495	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	230134	+	TSC_hg19_v1_chr9_-_130186602 AK124330	257254	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.774183	CTCF.p2:50:0.774
chr14	103572175	103572275	reg1001644.p3	4.831	+	BC113655 BC117375 NM_001077594 HQ258590	-5707	+	BC047871 BC048261 TSC_hg19_v1_chr14_-_103523736 AB032950 BC155541 NM_006035 BC078666 AF128625	-48488	-	AB384568 TSC_hg19_v1_chr14_-_103523568	-48684	-	TSC_hg19_v1_chr14_+_103589771 BC017818	17520	+	M92357 NM_006291 BC128449 BC128450 TSC_hg19_v1_chr14_+_103592873	20543	+	NM_001969 TSC_hg19_v1_chr14_+_103800527	228285	+	BC113655|EXOC3L4|91828|exocyst complex component 3-like 4##BC117375|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001077594|EXOC3L4|91828|exocyst complex component 3-like 4##HQ258590|EXOC3L4|91828|exocyst complex component 3-like 4##BC047871|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC048261|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AB032950|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC155541|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##NM_006035|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AF128625|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC017818|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_001969|EIF5|1983|eukaryotic translation initiation factor 5	0.99818	CTCF.p2:15:0.998
chr16	67570843	67570939	reg1024398.p2	4.831	+	NM_001193523 AK293748	-7307	+	TSC_hg19_v1_chr16_+_67562734 NM_024519 AK127792 NM_001193522 AK307467 BC012730	-8150	+	NM_001138 U88063	-53176	-	TSC_hg19_v1_chr16_+_67571364 NM_001193524 BC021284 AK295677	496	+	AK097087 TSC_hg19_v1_chr16_+_67572105	1153	+	BC041086 AK023787 TSC_hg19_v1_chr16_+_67573861 BC098587	2973	+	NM_001193523|FAM65A|79567|family with sequence similarity 65, member A##AK293748|FAM65A|79567|family with sequence similarity 65, member A##NM_024519|FAM65A|79567|family with sequence similarity 65, member A##AK127792|FAM65A|79567|family with sequence similarity 65, member A##NM_001193522|FAM65A|79567|family with sequence similarity 65, member A##AK307467|FAM65A|79567|family with sequence similarity 65, member A##NM_001138|AGRP|181|agouti related protein homolog (mouse)##U88063|AGRP|181|agouti related protein homolog (mouse)##NM_001193524|FAM65A|79567|family with sequence similarity 65, member A##AK295677|FAM65A|79567|family with sequence similarity 65, member A##AK097087|FAM65A|79567|family with sequence similarity 65, member A##BC041086|FAM65A|79567|family with sequence similarity 65, member A##AK023787|FAM65A|79567|family with sequence similarity 65, member A##BC098587|FAM65A|79567|family with sequence similarity 65, member A	0.266854	CTCF.p2:15:0.267
chr2	43467756	43467872	reg1025456.p2	4.831	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-14072	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-14084	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-14469	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	355334	-	TSC_hg19_v1_chr2_+_43864411 BC063310	396599	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	396625	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.531298	CTCF.p2:17:0.531
chr5	111171045	111171145	reg1028599.p1	4.831	+	NM_001142477 TSC_hg19_v1_chr5_-_111093886 NM_001142476	-77242	-	NM_001142479 NM_001142480 BC011050 TSC_hg19_v1_chr5_-_111093377 NM_001142478	-77737	-	TSC_hg19_v1_chr5_-_111093091 NM_001142482 NM_001142481	-78014	-	AK298779 NM_001142474 NM_001142475	141479	-	TSC_hg19_v1_chr5_+_111496560 AB002437	325474	+	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	583778	-	NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13##BC011050|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142482|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142481|C5orf13|9315|chromosome 5 open reading frame 13##AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A	0.109974	
chr6	150510464	150510588	reg1028153.p1	4.831	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-46285	+	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	-120313	-	BC131600 AB528849 AY039682 NM_130900	-163893	-	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	179632	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	410494	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	676306	+	NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.0	
chrX	89012927	89013060	reg1029793.p1	4.831	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	-1010753	+	NM_019117 NM_057162 AK056457 AB051474 BC161675 AL832514 AF284765 AF284766 BC140839 BC140840 BC142652 BC146677 AB385497	-2240188	+	AK055953 AK298787 NM_001139515	-3495023	+	BC117398 BC117400 NM_138960 BC101144 BC101145 AF497480 BC029920 AB464725 HQ258115	164018	+	NM_080832	1676603	+	NM_032967 AJ276804 AJ564847 AK299638 AK299813 AK316263 TSC_hg19_v1_chrX_+_91034373	2021324	+	NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1##NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)##NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)##AK056457|KLHL4|56062|kelch-like 4 (Drosophila)##AB051474|KLHL4|56062|kelch-like 4 (Drosophila)##BC161675|KLHL4|56062|kelch-like 4 (Drosophila)##AL832514|KLHL4|56062|kelch-like 4 (Drosophila)##AF284765|KLHL4|56062|kelch-like 4 (Drosophila)##AF284766|KLHL4|56062|kelch-like 4 (Drosophila)##BC140839|KLHL4|56062|kelch-like 4 (Drosophila)##BC140840|KLHL4|56062|kelch-like 4 (Drosophila)##BC142652|KLHL4|56062|kelch-like 4 (Drosophila)##BC146677|KLHL4|56062|kelch-like 4 (Drosophila)##AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)##BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_080832|PABPC5|140886|poly(A) binding protein, cytoplasmic 5##NM_032967|PCDH11X|27328|protocadherin 11 X-linked##AJ276804|PCDH11X|27328|protocadherin 11 X-linked##AJ564847|PCDH11X|27328|protocadherin 11 X-linked##AK299813|PCDH11X|27328|protocadherin 11 X-linked##AK316263|PCDH11X|27328|protocadherin 11 X-linked	0.961882	CTCF.p2:-22:0.962
chr1	206963872	206964052	reg1028328.p1	4.830	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-18083	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-105491	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-154852	+	AY040367 NM_153758 AB463800	8264	+	AF453946 NM_013371	38259	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	75213	+	AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20	0.0	
chr12	51735113	51735294	reg1002778.p1	4.830	+	TSC_hg19_v1_chr12_-_51717961 BC047686 AK314304	-17223	-	TSC_hg19_v1_chr12_-_51717911 AK093638 AB032698 AK000783 AK225911 NM_016293	-17282	-	TSC_hg19_v1_chr12_-_51717901 CU690454 AF146531	-17335	-	AB463599 BC075091 AF120493 BC069454 NM_001971	5239	-	AK295315 AB018282 TSC_hg19_v1_chr12_+_51785241 DQ975204 DQ996398 DQ996537	49987	+	BC035822 NM_007210	49992	-	BC047686|BIN2|51411|bridging integrator 2##AK314304|BIN2|51411|bridging integrator 2##AK093638|BIN2|51411|bridging integrator 2##AB032698|BIN2|51411|bridging integrator 2##AK000783|BIN2|51411|bridging integrator 2##AK225911|BIN2|51411|bridging integrator 2##NM_016293|BIN2|51411|bridging integrator 2##AF146531|BIN2|51411|bridging integrator 2##BC075091|CELA1|1990|chymotrypsin-like elastase family, member 1##AF120493|CELA1|1990|chymotrypsin-like elastase family, member 1##BC069454|CELA1|1990|chymotrypsin-like elastase family, member 1##NM_001971|CELA1|1990|chymotrypsin-like elastase family, member 1##AK295315|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AB018282|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ975204|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ996398|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ996537|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##BC035822|GALNT6|11226|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)##NM_007210|GALNT6|11226|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)	0.0	
chr13	58290572	58290714	reg1032724.p1	4.830	+	TSC_hg19_v1_chr13_+_58207858 AK307545	-82747	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	-84696	+	NM_001040429	-84855	+	BC041395 TSC_hg19_v1_chr13_-_60325215	2034501	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	2296677	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	2447338	-	AK307545|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##NM_001040429|PCDH17|27253|protocadherin 17##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	0.0	
chr16	48573120	48573225	reg1029199.p2	4.830	+	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	-153920	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	-173381	-	BC042550 TSC_hg19_v1_chr16_-_48399765	-173412	-	BC051897 TSC_hg19_v1_chr16_-_48644092 AB014515 BC152472 NM_153029	70944	-	AB527638 TSC_hg19_v1_chr16_-_49315397	742221	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	742328	-	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC042550|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC051897|N4BP1|9683|NEDD4 binding protein 1##AB014515|N4BP1|9683|NEDD4 binding protein 1##BC152472|N4BP1|9683|NEDD4 binding protein 1##NM_153029|N4BP1|9683|NEDD4 binding protein 1##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor	0.967733	CTCF.p2:3:0.968
chr20	42379924	42380105	reg1027251.p1	4.830	+	BC040049 AK058060 NM_001008901 NM_176791	-24411	-	TSC_hg19_v1_chr20_+_42295753 AK303249 AK314791 BC053555 X13293 AB528519 AK223482 DQ893522 DQ895945	-84179	+	NM_002466 TSC_hg19_v1_chr20_+_42295720 BC007585	-84293	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	163473	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	164779	+	NM_001098798	194521	+	BC040049|GTSF1L|149699|gametocyte specific factor 1-like##AK058060|GTSF1L|149699|gametocyte specific factor 1-like##NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like##NM_176791|GTSF1L|149699|gametocyte specific factor 1-like##AK303249|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK314791|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC053555|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##X13293|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK223482|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ893522|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ895945|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_002466|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC007585|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098798|TOX2|84969|TOX high mobility group box family member 2	0.0	
chr5	140777362	140777498	reg1026729.p1	4.830	+	NM_014004 NM_032088	-5948	+	BC113607 BC112088 AF152333 AF152520 NM_003736 NM_032098	-10004	+	BC136747 BC136748 AF152327 AF152514 NM_018920 NM_032087 AB208958	-14942	+	BC093877 BC093879 AB384865 AF152334 AF152521 NM_018925 NM_032099	218	+	TSC_hg19_v1_chr5_+_140782367 BC132769 AF152329 AF152516 NM_018921 NM_032089	5013	+	AF152335 AF152522 NM_018926 NM_032100	10339	+	NM_014004|PCDHGA8|9708|protocadherin gamma subfamily A, 8##NM_032088|PCDHGA8|9708|protocadherin gamma subfamily A, 8##BC113607|PCDHGB4|8641|protocadherin gamma subfamily B, 4##BC112088|PCDHGB4|8641|protocadherin gamma subfamily B, 4##AF152333|PCDHGB4|8641|protocadherin gamma subfamily B, 4##AF152520|PCDHGB4|8641|protocadherin gamma subfamily B, 4##NM_003736|PCDHGB4|8641|protocadherin gamma subfamily B, 4##NM_032098|PCDHGB4|8641|protocadherin gamma subfamily B, 4##BC136747|PCDHGA7|56108|protocadherin gamma subfamily A, 7##BC136748|PCDHGA7|56108|protocadherin gamma subfamily A, 7##AF152327|PCDHGA7|56108|protocadherin gamma subfamily A, 7##AF152514|PCDHGA7|56108|protocadherin gamma subfamily A, 7##NM_018920|PCDHGA7|56108|protocadherin gamma subfamily A, 7##NM_032087|PCDHGA7|56108|protocadherin gamma subfamily A, 7##AB208958|PCDHGA7|56108|protocadherin gamma subfamily A, 7##BC093877|PCDHGB5|56101|protocadherin gamma subfamily B, 5##BC093879|PCDHGB5|56101|protocadherin gamma subfamily B, 5##AF152334|PCDHGB5|56101|protocadherin gamma subfamily B, 5##AF152521|PCDHGB5|56101|protocadherin gamma subfamily B, 5##NM_018925|PCDHGB5|56101|protocadherin gamma subfamily B, 5##NM_032099|PCDHGB5|56101|protocadherin gamma subfamily B, 5##BC132769|PCDHGA9|56107|protocadherin gamma subfamily A, 9##AF152329|PCDHGA9|56107|protocadherin gamma subfamily A, 9##AF152516|PCDHGA9|56107|protocadherin gamma subfamily A, 9##NM_018921|PCDHGA9|56107|protocadherin gamma subfamily A, 9##NM_032089|PCDHGA9|56107|protocadherin gamma subfamily A, 9##AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6##AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6##NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6##NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6	0.0	
chr9	131790854	131790995	reg1030627.p1	4.830	+	EU832345 EU832430 TSC_hg19_v1_chr9_-_131790591 AF257319 AF258589 AB058751 BC014635 NM_020145	-392	-	TSC_hg19_v1_chr9_+_131709992 BX537774 D79991	-80913	+	TSC_hg19_v1_chr9_+_131709977 NM_015354	-80944	+	TSC_hg19_v1_chr9_+_131798900 AK074127 AK075421 AK301241	8006	+	AK303036 BC009114 NM_032809	8308	+	TSC_hg19_v1_chr9_+_131843403 AY189675 AK290713 NM_001135917 NM_020438 BC067858 AK293627 BC033686 BC022553 BC009493 BC040152	52471	+	EU832345|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##EU832430|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##AF257319|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##AF258589|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##AB058751|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##BC014635|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##NM_020145|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##BX537774|NUP188|23511|nucleoporin 188kDa##D79991|NUP188|23511|nucleoporin 188kDa##NM_015354|NUP188|23511|nucleoporin 188kDa##AK074127|FAM73B|84895|family with sequence similarity 73, member B##AK075421|FAM73B|84895|family with sequence similarity 73, member B##AK301241|FAM73B|84895|family with sequence similarity 73, member B##AK303036|FAM73B|84895|family with sequence similarity 73, member B##BC009114|FAM73B|84895|family with sequence similarity 73, member B##NM_032809|FAM73B|84895|family with sequence similarity 73, member B##AY189675|DOLPP1|57171|dolichyl pyrophosphate phosphatase 1##AK290713|DOLPP1|57171|dolichyl pyrophosphate phosphatase 1##NM_001135917|DOLPP1|57171|dolichyl pyrophosphate phosphatase 1##NM_020438|DOLPP1|57171|dolichyl pyrophosphate phosphatase 1##BC067858|DOLPP1|57171|dolichyl pyrophosphate phosphatase 1##AK293627|DOLPP1|57171|dolichyl pyrophosphate phosphatase 1##BC033686|DOLPP1|57171|dolichyl pyrophosphate phosphatase 1##BC022553|DOLPP1|57171|dolichyl pyrophosphate phosphatase 1##BC009493|DOLPP1|57171|dolichyl pyrophosphate phosphatase 1##BC040152|DOLPP1|57171|dolichyl pyrophosphate phosphatase 1	0.0	
chrX	107547613	107547703	reg1024454.p1	4.830	+	BC061696 NM_052936 NM_178270 BC041862 AK293533 AJ504651 AK314429 AJ320508 AJ320509 AK054927	-212691	+	AB528690 BT019689 GQ129344 GQ129345 AK295996 AK309326 TSC_hg19_v1_chrX_-_107334773 AB009619 AY057056 BC011960 AK058108 D83197 NM_002814 NM_170750	-212847	-	BX648658 NM_001170553 NM_182607 AK301783 BC043216 BX640913 AK315846 AK301311 AK292472	-259399	+	BC140855 BC144669 BC000874 BC070203 NM_033641 D21337	133949	-	BT007228 L22763 U04845 NM_001847 BC005305	135005	-	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	135426	+	BC061696|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##NM_052936|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##NM_178270|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##BC041862|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK293533|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ504651|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK314429|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ320508|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ320509|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK054927|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##BT019689|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129344|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129345|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK295996|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK309326|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AB009619|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AY057056|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BC011960|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK058108|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##D83197|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_002814|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_170750|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1##BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1##BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1##BC140855|COL4A6|1288|collagen, type IV, alpha 6##BC144669|COL4A6|1288|collagen, type IV, alpha 6##BC000874|COL4A6|1288|collagen, type IV, alpha 6##BC070203|COL4A6|1288|collagen, type IV, alpha 6##NM_033641|COL4A6|1288|collagen, type IV, alpha 6##D21337|COL4A6|1288|collagen, type IV, alpha 6##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5	0.997422	CTCF.p2:9:0.997
chr12	31476819	31476999	reg1027000.p1	4.829	+	BC047317 BC050522 X99583 AK303139 TSC_hg19_v1_chr12_+_31226840 U33833 U75967 BC001591	-250036	+	TSC_hg19_v1_chr12_+_31226805 U75968 BC011264	-250101	+	TSC_hg19_v1_chr12_+_31226789 BC148224 BC111733 NM_004399 NM_030653 NM_152438 AK297607 BC050069	-250131	+	TSC_hg19_v1_chr12_-_31477084 AK294457	178	-	BC071966 TSC_hg19_v1_chr12_-_31479052 BC004462 AK027736 AF087885 AK026932 AL157432	2149	-	TSC_hg19_v1_chr12_-_31479085 AF212220	2192	-	BC047317|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050522|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##X99583|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK303139|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U33833|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75967|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC001591|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75968|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC011264|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC148224|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_004399|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_030653|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_152438|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK297607|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050069|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK294457|FAM60A|58516|family with sequence similarity 60, member A##BC071966|FAM60A|58516|family with sequence similarity 60, member A##BC004462|FAM60A|58516|family with sequence similarity 60, member A##AF087885|FAM60A|58516|family with sequence similarity 60, member A##AK026932|FAM60A|58516|family with sequence similarity 60, member A##AL157432|FAM60A|58516|family with sequence similarity 60, member A##AF212220|FAM60A|58516|family with sequence similarity 60, member A	0.025899	
chr18	12328019	12328119	reg1025788.p1	4.829	+	TSC_hg19_v1_chr18_+_12308246 AK022340 AK098440 AK304616 BC002654 NM_032525 AK298196 BC039717 AB590145 DQ893486 DQ896394	-19804	+	TSC_hg19_v1_chr18_+_12308239 AK001295 AK092677 AK311364	-19831	+	NM_001279 AK122762 AF041378 AY364639	-73720	+	TSC_hg19_v1_chr18_-_12377199 Y18314 BC065016	49119	-	TSC_hg19_v1_chr18_-_12377251 BC024282 NM_006796	49198	-	NM_001142405 NM_006553 AK056046 BC106750 TSC_hg19_v1_chr18_+_12407941	79852	+	AK022340|TUBB6|84617|tubulin, beta 6 class V##AK098440|TUBB6|84617|tubulin, beta 6 class V##AK304616|TUBB6|84617|tubulin, beta 6 class V##BC002654|TUBB6|84617|tubulin, beta 6 class V##NM_032525|TUBB6|84617|tubulin, beta 6 class V##AK298196|TUBB6|84617|tubulin, beta 6 class V##DQ893486|TUBB6|84617|tubulin, beta 6 class V##DQ896394|TUBB6|84617|tubulin, beta 6 class V##AK001295|TUBB6|84617|tubulin, beta 6 class V##AK092677|TUBB6|84617|tubulin, beta 6 class V##AK311364|TUBB6|84617|tubulin, beta 6 class V##NM_001279|CIDEA|1149|cell death-inducing DFFA-like effector a##AK122762|CIDEA|1149|cell death-inducing DFFA-like effector a##AF041378|CIDEA|1149|cell death-inducing DFFA-like effector a##AY364639|CIDEA|1149|cell death-inducing DFFA-like effector a##Y18314|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##BC065016|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##BC024282|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##NM_006796|AFG3L2|10939|AFG3 ATPase family gene 3-like 2 (S. cerevisiae)##NM_001142405|SLMO1|10650|slowmo homolog 1 (Drosophila)##NM_006553|SLMO1|10650|slowmo homolog 1 (Drosophila)##AK056046|SLMO1|10650|slowmo homolog 1 (Drosophila)##BC106750|SLMO1|10650|slowmo homolog 1 (Drosophila)	0.981448	CTCF.p2:17:0.981
chr21	26979801	26979924	reg1025765.p1	4.829	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	-47	-	TSC_hg19_v1_chr21_+_26934442 AF402776	-45390	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-1178794	+	NM_021219 TSC_hg19_v1_chr21_+_27011719	31791	+	TSC_hg19_v1_chr21_+_27011769 AK312708 AY077698 AY016009 AX772824 AK294769	31975	+	AY358361 BC017779 TSC_hg19_v1_chr21_+_27012056	32189	+	BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##AK124194|FLJ42200|400860|FLJ42200 protein##NM_021219|JAM2|58494|junctional adhesion molecule 2##AK312708|JAM2|58494|junctional adhesion molecule 2##AY077698|JAM2|58494|junctional adhesion molecule 2##AY016009|JAM2|58494|junctional adhesion molecule 2##AX772824|JAM2|58494|junctional adhesion molecule 2##AK294769|JAM2|58494|junctional adhesion molecule 2##AY358361|JAM2|58494|junctional adhesion molecule 2##BC017779|JAM2|58494|junctional adhesion molecule 2	0.67272	CTCF.p2:52:0.673
chr6	28985024	28985124	reg1025607.p1	4.829	+	NM_001010877 AL833166	-12010	-	TSC_hg19_v1_chr6_-_28891741 BC066924 AX776009 AX776011 NM_006510	-93307	-	AF230393 AF230394 J03407 TSC_hg19_v1_chr6_-_28891717 AB209885 BC013580 AJ420519	-93394	-	NM_001195202	18925	+	BC103870 BC103871 BC103872 NM_030903 AJ459865	27909	-	BC136817 BC136818 AJ459864 AJ459872 AJ459873 NM_001005226	69994	-	NM_001010877|ZNF311|282890|zinc finger protein 311##AL833166|ZNF311|282890|zinc finger protein 311##BC066924|TRIM27|5987|tripartite motif containing 27##AX776009|TRIM27|5987|tripartite motif containing 27##AX776011|TRIM27|5987|tripartite motif containing 27##NM_006510|TRIM27|5987|tripartite motif containing 27##AF230393|TRIM27|5987|tripartite motif containing 27##AF230394|TRIM27|5987|tripartite motif containing 27##J03407|TRIM27|5987|tripartite motif containing 27##AB209885|TRIM27|5987|tripartite motif containing 27##BC013580|TRIM27|5987|tripartite motif containing 27##AJ420519|TRIM27|5987|tripartite motif containing 27##NM_001195202|LOC100129636|100129636|uncharacterized LOC100129636##BC103870|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1##BC103871|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1##BC103872|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1##NM_030903|OR2W1|26692|olfactory receptor, family 2, subfamily W, member 1##BC136817|OR2B3|442184|olfactory receptor, family 2, subfamily B, member 3##BC136818|OR2B3|442184|olfactory receptor, family 2, subfamily B, member 3##AJ459873|OR2B3|442184|olfactory receptor, family 2, subfamily B, member 3##NM_001005226|OR2B3|442184|olfactory receptor, family 2, subfamily B, member 3	0.999391	CTCF.p2:1:0.999
chr10	26776439	26776619	reg1030788.p2	4.828	+	TSC_hg19_v1_chr10_+_26727703 AY152730	-48823	+	TSC_hg19_v1_chr10_+_26727679 BC054516	-48861	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	-49212	+	AK096048 TSC_hg19_v1_chr10_-_26986612	210055	-	TSC_hg19_v1_chr10_+_26986597 AK024802 AK223414 AB210838 NM_014317 BC063635 BC049211 AF118395	210117	+	TSC_hg19_v1_chr10_-_27057776 AK315914	281288	-	AY152730|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK024802|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK223414|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AB210838|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##NM_014317|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC063635|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC049211|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AF118395|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK315914|ABI1|10006|abl-interactor 1	0.0	
chr14	97165777	97165898	reg1027740.p2	4.828	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-197053	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-197091	+	TSC_hg19_v1_chr14_+_96968718 NM_001252006 NM_001252007 NM_032632 AK302406 BC036014	-197128	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	97878	+	AK098639 NM_182560	2012112	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	2571780	-	BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##NM_001252006|PAPOLA|10914|poly(A) polymerase alpha##NM_001252007|PAPOLA|10914|poly(A) polymerase alpha##NM_032632|PAPOLA|10914|poly(A) polymerase alpha##AK302406|PAPOLA|10914|poly(A) polymerase alpha##BC036014|PAPOLA|10914|poly(A) polymerase alpha##NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.399162	CTCF.p2:-42:0.399
chr17	62982560	62982740	reg1028608.p3	4.828	+	TSC_hg19_v1_chr17_-_62971685 BX537538 AK056627 BC063466 AK311317	-11030	-	TSC_hg19_v1_chr17_-_62915587 AK294371	-67054	-	AB011135 NM_199340	-67748	-	TSC_hg19_v1_chr17_-_63009302 AK026902	26656	-	TSC_hg19_v1_chr17_-_63052724 AB528470 AF493902 CU691408 DQ893572 DQ894448 AK313672	70068	-	TSC_hg19_v1_chr17_-_63052756 L22075 BC036756	70110	-	BX537538|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK056627|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##BC063466|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK311317|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3##NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AF493902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ893572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ894448|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AK313672|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##L22075|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC036756|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	0.0	
chr17	65154345	65154481	reg1028084.p1	4.828	+	NM_000727 L07738 AK313852 BC113486 BC113492 BC069493 HQ258641	-113702	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	-193524	+	BC101633 NM_145811 BC101607 AF361351 AF458898	-280993	+	D29677 AK310217 TSC_hg19_v1_chr17_-_65241302 BC130582 BC144083	86876	-	TSC_hg19_v1_chr17_-_65241313 NM_014877	86899	-	CU676364 AB384721 DQ892821 DQ896067 TSC_hg19_v1_chr17_-_65362658 AK222679 BC065826	208235	-	NM_000727|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##L07738|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##AK313852|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113486|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113492|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC069493|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##HQ258641|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##D29677|HELZ|9931|helicase with zinc finger##AK310217|HELZ|9931|helicase with zinc finger##BC130582|HELZ|9931|helicase with zinc finger##BC144083|HELZ|9931|helicase with zinc finger##NM_014877|HELZ|9931|helicase with zinc finger##DQ892821|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##DQ896067|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK222679|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##BC065826|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12	0.974682	CTCF.p2:0:0.975
chr2	144041779	144041908	reg1028014.p1	4.828	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	-154852	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	-154913	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-406603	+	NM_024659	953062	-	AY281366 NM_001006636	1010216	-	BC017741 AK291357 TSC_hg19_v1_chr2_-_145090037 BC061699	1048189	-	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1##AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1##BC017741|GTDC1|79712|glycosyltransferase-like domain containing 1##AK291357|GTDC1|79712|glycosyltransferase-like domain containing 1##BC061699|GTDC1|79712|glycosyltransferase-like domain containing 1	0.938135	CTCF.p2:8:0.938
chr2	182321445	182321626	reg1013854.p1	4.828	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-475708	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-475892	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-476165	+	NM_000885	83	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	515	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	787	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.0	
chr6	161156581	161156694	reg1027915.p2	4.828	+	NM_000301 NM_001168338 AK308036 AK312966 AK298338 X05199 M74220 BC060513	-33376	+	NM_005577	-69231	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	-387243	+	TSC_hg19_v1_chr6_+_161412797 BC146770 D86968	256105	+	TSC_hg19_v1_chr6_+_161412815 AF002715 NM_005922 NM_006724	256177	+	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	256221	+	NM_000301|PLG|5340|plasminogen##NM_001168338|PLG|5340|plasminogen##AK308036|PLG|5340|plasminogen##AK312966|PLG|5340|plasminogen##AK298338|PLG|5340|plasminogen##X05199|PLG|5340|plasminogen##M74220|PLG|5340|plasminogen##BC060513|PLG|5340|plasminogen##NM_005577|LPA|4018|lipoprotein, Lp(a)##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##BC146770|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##D86968|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AF002715|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_005922|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_006724|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4	0.0	
chr6	38538636	38538768	reg1030211.p1	4.828	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	-751012	+	TSC_hg19_v1_chr6_+_37787274 NM_021943	-751412	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	-872996	-	BC101354 BC101355 BC101356 BC101357 AK057507 NM_001172418 NM_152733	25100	-	AB067467 TSC_hg19_v1_chr6_-_38607611	68903	-	TSC_hg19_v1_chr6_-_38607697 BX537534	68964	-	AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##BC101354|BTBD9|114781|BTB (POZ) domain containing 9##BC101355|BTBD9|114781|BTB (POZ) domain containing 9##BC101356|BTBD9|114781|BTB (POZ) domain containing 9##BC101357|BTBD9|114781|BTB (POZ) domain containing 9##AK057507|BTBD9|114781|BTB (POZ) domain containing 9##NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9##NM_152733|BTBD9|114781|BTB (POZ) domain containing 9##AB067467|BTBD9|114781|BTB (POZ) domain containing 9##BX537534|BTBD9|114781|BTB (POZ) domain containing 9	0.46082	CTCF.p2:40:0.461
chr8	101506945	101507126	reg1022928.p2	4.828	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-184750	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-184854	-	AB271913 AB271914 AB029316 NM_015435	-191564	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	64905	-	AK093906 AX748361 NM_152628	154857	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	226771	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr12	111841097	111841277	reg1007017.p2	4.827	+	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	-34277	-	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	-34341	-	BC151245 NM_015267 AB006631 AF271236	-369315	+	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	2562	+	AK126309 TSC_hg19_v1_chr12_-_111893987	52736	-	TSC_hg19_v1_chr12_-_112036257 AK095017	195088	-	BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3##AK095017|ATXN2|6311|ataxin 2	0.0	
chr20	20818245	20818358	reg1028267.p1	4.827	+	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	-125073	-	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	-469547	+	NM_001167816 AL117439	-780981	+	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	288363	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	288426	+	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	465674	+	DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1##BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2	0.999122	CTCF.p2:5:0.999
chr2	47403540	47403720	reg1027457.p1	4.827	+	TSC_hg19_v1_chr2_-_47403624 M19311 BC003354 BC006464	-4	-	AK097491 NM_001163561 NM_173649	-21160	-	TSC_hg19_v1_chr2_-_47168913 NM_001171508 NM_001171511	-234683	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	20	-	TSC_hg19_v1_chr2_-_47403656 BC008437	24	-	TSC_hg19_v1_chr2_-_47403685 NM_001743	79	-	M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK097491|C2orf61|285051|chromosome 2 open reading frame 61##NM_001163561|C2orf61|285051|chromosome 2 open reading frame 61##NM_173649|C2orf61|285051|chromosome 2 open reading frame 61##NM_001171508|MCFD2|90411|multiple coagulation factor deficiency 2##NM_001171511|MCFD2|90411|multiple coagulation factor deficiency 2##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC008437|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	0.035663	
chr2	95463131	95463264	reg1030984.p1	4.827	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3615194	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-5251479	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-5385443	+	AK097438 BC021716 NM_144705 AK296678 CU692394	74053	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	228285	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	324345	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.929399	CTCF.p2:-10:0.929
chr6	165033866	165034026	reg1024932.p1	4.827	+	AL050218 TSC_hg19_v1_chr6_+_163984651	-1049333	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	-1197714	+	TSC_hg19_v1_chr6_+_163835795 AF272349	-1198156	+	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	689146	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	1041750	-	AY203946 TSC_hg19_v1_chr6_-_166076051	1042106	-	AL050218|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##AY203946|LOC100132188|100132188|LP7097	0.893154	CTCF.p2:8:0.893
chr7	107383970	107384076	reg1028215.p1	4.827	+	BC052342 BC037315 BC047092 BC022493 TSC_hg19_v1_chr7_-_107302278	-81807	-	AF030880 NM_000441	-82944	+	NM_001008405 BT006981 CU678973	-162813	+	AK293352 NM_024814	255	+	TSC_hg19_v1_chr7_+_107384589 AK026762 AK307992 BC130529 BC130531 BC144176	558	+	L02785 BC025671 TSC_hg19_v1_chr7_-_107443671 BX640837 NM_000111	59631	-	BC052342|LOC286002|286002|uncharacterized LOC286002##BC037315|LOC286002|286002|uncharacterized LOC286002##BC047092|LOC286002|286002|uncharacterized LOC286002##BC022493|LOC286002|286002|uncharacterized LOC286002##AF030880|SLC26A4|5172|solute carrier family 26, member 4##NM_000441|SLC26A4|5172|solute carrier family 26, member 4##NM_001008405|BCAP29|55973|B-cell receptor-associated protein 29##BT006981|BCAP29|55973|B-cell receptor-associated protein 29##AK293352|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##NM_024814|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK026762|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK307992|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC130529|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC130531|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC144176|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##L02785|SLC26A3|1811|solute carrier family 26, member 3##BC025671|SLC26A3|1811|solute carrier family 26, member 3##BX640837|SLC26A3|1811|solute carrier family 26, member 3##NM_000111|SLC26A3|1811|solute carrier family 26, member 3	0.284149	CTCF.p2:29:0.284
chr8	28984794	28984898	reg1025395.p1	4.827	+	TSC_hg19_v1_chr8_+_28748135 AY522342 DQ269478 BC069242 NM_024567	-236719	+	TSC_hg19_v1_chr8_+_28747911 AK290683 NM_001135726 AK310959	-236929	+	NM_001145159 NM_018250	-237149	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	135768	-	AL137704 NM_057158	221475	-	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	223224	-	AY522342|HMBOX1|79618|homeobox containing 1##DQ269478|HMBOX1|79618|homeobox containing 1##BC069242|HMBOX1|79618|homeobox containing 1##NM_024567|HMBOX1|79618|homeobox containing 1##AK290683|HMBOX1|79618|homeobox containing 1##NM_001135726|HMBOX1|79618|homeobox containing 1##AK310959|HMBOX1|79618|homeobox containing 1##NM_001145159|INTS9|55756|integrator complex subunit 9##NM_018250|INTS9|55756|integrator complex subunit 9##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4	0.032834	
chr11	102482152	102482315	reg1027807.p2	4.826	+	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	-80774	-	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-158620	-	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-264205	+	AB527354 NM_004771 Y12779	13822	-	AB527320 AF195192 AY358752 NM_022122	94222	-	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	113420	-	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	0.0	
chr12	54541120	54541208	reg1030345.p1	4.826	+	BC030212 TSC_hg19_v1_chr12_-_54541132	-83	-	TSC_hg19_v1_chr12_+_54519846 BC009385	-21306	+	BC050442 NM_153633 AB464580 CU690682 EU446482	-93481	+	BC088352 BC000417 TSC_hg19_v1_chr12_-_54582755 AK091468 AX747003 NM_001243789 NM_001243790 BC105607 AK001789 AK001235 AK222473 AK290274 NM_001243787 NM_001243788 NM_001243791 NM_014311	41522	-	BC006821 NM_001127322 TSC_hg19_v1_chr12_-_54653330	112160	-	NM_001127321 TSC_hg19_v1_chr12_-_54653370	112207	-	BC009385|LOC400043|400043|uncharacterized LOC400043##BC050442|HOXC4|3221|homeobox C4##NM_153633|HOXC4|3221|homeobox C4##EU446482|HOXC6|3223|homeobox C6##BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC006821|CBX5|23468|chromobox homolog 5##NM_001127322|CBX5|23468|chromobox homolog 5##NM_001127321|CBX5|23468|chromobox homolog 5	0.325696	CTCF.p2:17:0.326
chr14	30474455	30474573	reg1026768.p1	4.826	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	-77660	-	TSC_hg19_v1_chr14_+_29241992 BX248251	-1232519	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-1237601	+	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	553846	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	617010	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	617030	+	AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1	0.842472	CTCF.p2:9:0.842
chr17	34890284	34890416	reg1027235.p2	4.826	+	NM_004773 AF400652 BC105608 BC017931 AK290858 AK310022 AB464422 AK308583 L40410 TSC_hg19_v1_chr17_+_34842662	-47783	+	BC033670 BC047739 AK225985 AK302064 BC075809 AK292344 NM_001040282	-82288	-	BC047739 AL136860 AK301823 BC071680 AK225985 AK302064 NM_001123392	-133336	-	TSC_hg19_v1_chr17_-_34890646 AK304073 BC008900 AK026518 AK299802	373	-	TSC_hg19_v1_chr17_+_34890824 BC054025	490	+	AB209035 AK293903 NM_001033580 NM_001163735 NM_025109	933	-	NM_004773|ZNHIT3|9326|zinc finger, HIT-type containing 3##AF400652|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC105608|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC017931|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK290858|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK310022|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK308583|ZNHIT3|9326|zinc finger, HIT-type containing 3##L40410|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC075809|TBC1D3G|654341|TBC1 domain family, member 3G##AK292344|TBC1D3G|654341|TBC1 domain family, member 3G##NM_001040282|TBC1D3G|654341|TBC1 domain family, member 3G##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK302064|TBC1D3|729873|TBC1 domain family, member 3##NM_001123392|TBC1D3H|729877|TBC1 domain family, member 3H##AK304073|MYO19|80179|myosin XIX##BC008900|MYO19|80179|myosin XIX##AK026518|MYO19|80179|myosin XIX##AK299802|MYO19|80179|myosin XIX##AB209035|MYO19|80179|myosin XIX##AK293903|MYO19|80179|myosin XIX##NM_001033580|MYO19|80179|myosin XIX##NM_001163735|MYO19|80179|myosin XIX##NM_025109|MYO19|80179|myosin XIX	1.049691	CTCF.p2:-6:0.998
chr5	153569535	153569715	reg1025820.p2	4.826	+	TSC_hg19_v1_chr5_+_153418558 AK315573 BC026244	-151065	+	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	-151101	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	-151168	-	TSC_hg19_v1_chr5_+_153570292 BC050333 NM_198321 AK127135 AB078145 AB527381 AJ505950 AK074132	733	+	TSC_hg19_v1_chr5_-_153825380 BC042059 AK095428	255742	-	TSC_hg19_v1_chr5_+_153825535 AK021588 NM_001131062 NM_001131063 NM_024632	255894	+	AK315573|MFAP3|4238|microfibrillar-associated protein 3##BC026244|MFAP3|4238|microfibrillar-associated protein 3##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2##BC050333|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##NM_198321|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK127135|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AB078145|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AJ505950|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK074132|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##BC042059|FLJ38109|386627|uncharacterized LOC386627##AK095428|FLJ38109|386627|uncharacterized LOC386627##AK021588|SAP30L|79685|SAP30-like##NM_001131062|SAP30L|79685|SAP30-like##NM_001131063|SAP30L|79685|SAP30-like##NM_024632|SAP30L|79685|SAP30-like	0.0	
chr10	125502277	125502416	reg1036499.p1	4.825	+	AJ505757 NM_153442 BC112011 BC113462	-76469	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-587990	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-588400	+	BC137492 BC146862 AY358565 NM_198148	149150	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	349553	-	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	350807	-	AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.855395	CTCF.p2:39:0.855
chr10	3917825	3917935	reg1014388.p3	4.825	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-90371	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-90569	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-702875	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	950538	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1087634	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1087743	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr14	20955637	20955804	reg1030076.p1	4.825	+	NM_000270 BC106074 AK307340 AK307364 AK313490 X00737 TSC_hg19_v1_chr14_+_20937568 AK098544 BC104206 BC104207 AB591016	-18111	+	BC020947 BX161490 NM_001100814 NM_144568 TSC_hg19_v1_chr14_-_20929650 AK314021	-26018	-	CU676778 CU678260 AM392745 AB528259 BC002867 AL137727 TSC_hg19_v1_chr14_-_20929594 BX248025	-26177	-	BC133002 BC133028 AY665805 NM_001012975	22900	+	AY907670 EF061296 EF061297 EF061298 EF061299 EF061300 EF061301 EF061302 EF061303 EF061304 NM_001001673 NM_001110356 NM_001110357 NM_001110358 NM_001110359 NM_001110360 NM_001110361	73369	-	BX161458 NM_145250	102682	-	NM_000270|PNP|4860|purine nucleoside phosphorylase##BC106074|PNP|4860|purine nucleoside phosphorylase##AK307340|PNP|4860|purine nucleoside phosphorylase##AK307364|PNP|4860|purine nucleoside phosphorylase##AK313490|PNP|4860|purine nucleoside phosphorylase##X00737|PNP|4860|purine nucleoside phosphorylase##AK098544|PNP|4860|purine nucleoside phosphorylase##BC104206|PNP|4860|purine nucleoside phosphorylase##BC104207|PNP|4860|purine nucleoside phosphorylase##BC020947|TMEM55B|90809|transmembrane protein 55B##BX161490|TMEM55B|90809|transmembrane protein 55B##NM_001100814|TMEM55B|90809|transmembrane protein 55B##NM_144568|TMEM55B|90809|transmembrane protein 55B##AK314021|TMEM55B|90809|transmembrane protein 55B##AM392745|TMEM55B|90809|transmembrane protein 55B##BC002867|TMEM55B|90809|transmembrane protein 55B##AL137727|TMEM55B|90809|transmembrane protein 55B##BX248025|TMEM55B|90809|transmembrane protein 55B##BC133002|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)##BC133028|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)##AY665805|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)##NM_001012975|RNASE10|338879|ribonuclease, RNase A family, 10 (non-active)##AY907670|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061296|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061297|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061298|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061299|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061300|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061301|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061302|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061303|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##EF061304|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001001673|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110356|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110357|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110358|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110359|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110360|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##NM_001110361|RNASE9|390443|ribonuclease, RNase A family, 9 (non-active)##BX161458|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##NM_145250|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)	0.777751	CTCF.p2:-6:0.778
chr17	40857200	40857365	reg1025050.p2	4.825	+	TSC_hg19_v1_chr17_+_40834578 NM_003632 U87223 BC171797 AB384696	-22574	+	AF208237 AY429103 EU832758 GQ129298 AF215981 BC098132 BC098157 BC098304 BC099840 NM_016602	-23440	-	TSC_hg19_v1_chr17_-_40829013 BC016062 AK024672 AB208939 BC052978 NM_024927	-28469	-	TSC_hg19_v1_chr17_-_40897056 BC015882 AK299887 AK295853 AK304835 AK309121 AK310399 AK311237 AL833159 AK295626 NM_001991	39796	-	BC034924 TSC_hg19_v1_chr17_-_40913104 BC001607 BC041021	55792	-	AK057121 TSC_hg19_v1_chr17_-_40913137	55855	-	NM_003632|CNTNAP1|8506|contactin associated protein 1##U87223|CNTNAP1|8506|contactin associated protein 1##BC171797|CNTNAP1|8506|contactin associated protein 1##AF208237|CCR10|2826|chemokine (C-C motif) receptor 10##AY429103|CCR10|2826|chemokine (C-C motif) receptor 10##EU832758|CCR10|2826|chemokine (C-C motif) receptor 10##GQ129298|CCR10|2826|chemokine (C-C motif) receptor 10##AF215981|CCR10|2826|chemokine (C-C motif) receptor 10##BC098132|CCR10|2826|chemokine (C-C motif) receptor 10##BC098157|CCR10|2826|chemokine (C-C motif) receptor 10##BC098304|CCR10|2826|chemokine (C-C motif) receptor 10##BC099840|CCR10|2826|chemokine (C-C motif) receptor 10##NM_016602|CCR10|2826|chemokine (C-C motif) receptor 10##BC016062|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AK024672|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AB208939|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##BC052978|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##NM_024927|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##BC015882|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK299887|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK295853|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK304835|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK309121|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK310399|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK311237|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AL833159|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK295626|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##NM_001991|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##BC034924|LOC100190938|100190938|uncharacterized LOC100190938##BC001607|LOC100190938|100190938|uncharacterized LOC100190938##BC041021|LOC100190938|100190938|uncharacterized LOC100190938##AK057121|LOC100190938|100190938|uncharacterized LOC100190938	0.0	
chr2	187645784	187645919	reg1029354.p1	4.825	+	TSC_hg19_v1_chr2_+_187558788 AK091423 AK289737 AX746973 BC060872 NM_177454 AF361495 CU687488	-87075	+	AK302990 NM_001144999	-180920	+	TSC_hg19_v1_chr2_+_187455042 EF560727 M14648 AB527165	-190824	+	AK128006 BC031094 NM_182521	68045	-	DQ280491 U17473 L76380 AK291630 AK292998 DQ280490 NM_005795	667095	-	J03225 AF021834 TSC_hg19_v1_chr2_-_188419163 AK313562 BC015514 BC014332	773259	-	AK091423|FAM171B|165215|family with sequence similarity 171, member B##AK289737|FAM171B|165215|family with sequence similarity 171, member B##BC060872|FAM171B|165215|family with sequence similarity 171, member B##NM_177454|FAM171B|165215|family with sequence similarity 171, member B##AF361495|FAM171B|165215|family with sequence similarity 171, member B##AK302990|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##NM_001144999|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##EF560727|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##M14648|ITGAV|3685|integrin, alpha V (vitronectin receptor, alpha polypeptide, antigen CD51)##AK128006|ZSWIM2|151112|zinc finger, SWIM-type containing 2##BC031094|ZSWIM2|151112|zinc finger, SWIM-type containing 2##NM_182521|ZSWIM2|151112|zinc finger, SWIM-type containing 2##DQ280491|CALCRL|10203|calcitonin receptor-like##U17473|CALCRL|10203|calcitonin receptor-like##L76380|CALCRL|10203|calcitonin receptor-like##AK291630|CALCRL|10203|calcitonin receptor-like##AK292998|CALCRL|10203|calcitonin receptor-like##NM_005795|CALCRL|10203|calcitonin receptor-like##J03225|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AF021834|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK313562|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC015514|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC014332|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)	0.0	
chr3	9120372	9120522	reg1025374.p2	4.825	+	AB528316 DQ891197 DQ894380 TSC_hg19_v1_chr3_-_9005128 AY004333 BC001302 AK222771 AF169796 AK023075 NM_020165	-115317	-	TSC_hg19_v1_chr3_-_8811300 NM_000916	-309163	-	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	-309361	-	AB007871 AB384477 AK094355 AF427144 TSC_hg19_v1_chr3_-_9290871 AF464189	170297	-	TSC_hg19_v1_chr3_-_9291320 NM_001033117 NM_014850 BC140004 AK054831	170871	-	TSC_hg19_v1_chr3_+_9404750 NM_001114092 NM_015453 AK023263 BC001622 AK001680 BC010421	284328	+	DQ891197|RAD18|56852|RAD18 homolog (S. cerevisiae)##DQ894380|RAD18|56852|RAD18 homolog (S. cerevisiae)##AY004333|RAD18|56852|RAD18 homolog (S. cerevisiae)##BC001302|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK222771|RAD18|56852|RAD18 homolog (S. cerevisiae)##AF169796|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK023075|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_020165|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_000916|OXTR|5021|oxytocin receptor##X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor##AB007871|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK094355|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF427144|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF464189|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_001114092|THUMPD3|25917|THUMP domain containing 3##NM_015453|THUMPD3|25917|THUMP domain containing 3##AK023263|THUMPD3|25917|THUMP domain containing 3##BC001622|THUMPD3|25917|THUMP domain containing 3##AK001680|THUMPD3|25917|THUMP domain containing 3##BC010421|THUMPD3|25917|THUMP domain containing 3	0.703744	CTCF.p2:-33:0.704
chr5	85634115	85634211	reg1028507.p2	4.825	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-1953499	-	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	-1953917	-	AK313713 NM_001884 X17405 X78076 X78075	-2617229	-	TSC_hg19_v1_chr5_+_85913757 AK026505	279595	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	279654	+	TSC_hg19_v1_chr5_+_86563706 CR749722	929522	+	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.011653	
chr6	50096304	50096449	reg1030037.p1	4.825	+	DQ012016 NM_001037498	-80013	-	DQ012014 DQ012015 NM_001037497 NM_001037728	-106706	-	DQ012017 NM_001037729	-159039	-	AY028376 NM_172238	584880	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	690159	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	1856019	-	DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##DQ012014|DEFB110|245913|defensin, beta 110 locus##DQ012015|DEFB110|245913|defensin, beta 110 locus##NM_001037497|DEFB110|245913|defensin, beta 110 locus##NM_001037728|DEFB110|245913|defensin, beta 110 locus##DQ012017|DEFB113|245927|defensin, beta 113##NM_001037729|DEFB113|245927|defensin, beta 113##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	0.939143	CTCF.p2:-44:0.939
chr10	52823549	52823696	reg1029569.p2	4.824	+	TSC_hg19_v1_chr10_+_52751129 D45864	-72501	+	TSC_hg19_v1_chr10_+_52750944 AK300110	-72682	+	TSC_hg19_v1_chr10_+_52750904 NM_001098512	-72715	+	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	10669	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	635725	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	1250493	+	D45864|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK300110|PRKG1|5592|protein kinase, cGMP-dependent, type I##NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	0.895819	CTCF.p2:-11:0.896
chr11	44587193	44587318	reg1031937.p1	4.824	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-28	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-90	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-255579	-	NM_130783	198720	+	TSC_hg19_v1_chr11_-_44956087 AF010315	368852	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	385162	-	AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_130783|TSPAN18|90139|tetraspanin 18##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11	0.0	
chr14	107148009	107148189	reg1012293.p2	4.824	+	GQ232991 EU814957 AY003867 GQ233006 AY003724 AY003757 FJ840009 GU552709 AY003791 FJ840366 JF810271 FJ840139 FJ874031 AF017464 HM774748 HM775002 HQ704029 DQ524134 DQ840815 DQ840856 AY530312 AY941926 AY986399 DQ100849 AB067106 AB363089 DQ535377 U00563 U64502 AY392909 AY393069 AY393070 AF062111 AF062168 X81739 X81750 Z14221 TSC_hg19_v1_chr14_-_107131555 AK097017 AK128476 AK130433	-16710	-	AF103081 JN110643 JN110687 GQ504895 GQ504960 HM774028 HM774358 HM774582 HM774889 X98961 AF165107 AY423163 AF485471 AF485473 AJ306675 AY423172 FN563800 EF633801 HM994977 HM994995 HM995120 HM995247 HM995290 HM995392 HM995519 HM995754 HM995991 HM996039 HM996369 AY866776 DQ322973 DQ926438 AF471404 AJ245345 AJ401162 AM279604 AY866777 DQ100932 DQ100975 DQ926053 DQ926476 GU570357 L19914 Z96976 AB067024 AB067127 AB363182 AB373619 AF231404 AF471217 AF471316 AF471319 AF471331 AF471353 AJ519231 AJ556646 AJ556650 AY640562 AY866705 AY866733 AY971141 DQ065617 DQ065721 DQ100842 DQ535272 DQ535332 DQ926279 EF633803 EF633809 EF633824 EF633825 FJ385293 FJ492933 FN563769 FN563801 FN563814 FN563817 FN563830 FN563831 L38018 Y08405 Y08406 Z96975 Z98724 AJ519258 AJ519228 AJ519314 AJ519323 AJ519243 AJ519280 AJ519310 AJ519335 AJ519268 AJ519313 X62126 TSC_hg19_v1_chr14_-_107122620	-25610	-	DQ454926 GU552751 DQ523845 DQ454743 DQ454741 FJ873884 FJ873949 FJ874082 DQ454745 AY003790 EU350425 EU667608 EF407835 DQ454756 DQ454758 DQ322814 AF343367 AF343413 AF103266 AJ007443 AF103288 FJ385341 AF103034 AF103338 AF062236 JN110970 L03820 HM774324 HM774398 HM774726 HM774904 HM774928 L33041 HM775043 AF408742 AF485449 AF078936 AF485451 AF485453 AF485455 EF633815 DQ524036 DQ524153 DQ926062 HM995709 HM995710 HM995711 HM995712 HM995713 HM995863 HM995864 HM995866 DQ322813 HM996268 AJ245306 AY044149 DQ100802 DQ100910 DQ926129 AB063797 AB063898 AB063899 AF022008 AF099199 AF398961 AF471517 AF471518 AF471519 AF471520 AJ224899 AJ399811 AY554175 AY640527 DQ065678 DQ535356 DQ779565 DQ779566 FJ385288 FN563805 FN563806 FN563810 FN563812 FN563827 FN563828 HQ689733 JF806286 X77017 L48239 AY392926 AY393064 AY452138 X65898 X81752 X81753 BC073782 AF067420 TSC_hg19_v1_chr14_-_107114275 AK097071	-33990	-	AY179836 AY179838 AY179841 AY179844 AY179846 AY179847 AY179848 AY179850 AY179854 AY179855 AY179856 AY179858 AY179860 AY003797 DQ454801 EF583677 EU099154 EU099192 AY003810 DQ454853 AY003779 DQ454620 DQ523910 GU552683 AY003802 AY003865 DQ454802 DQ454808 DQ454937 GU552691 GU552774 HM773974 FJ873961 EF441761 DQ454821 AY996332 FJ840044 FJ840053 FJ840143 FJ840193 FJ840194 FJ840196 FJ840204 FJ840239 FJ873866 FJ873869 FJ873895 FJ873936 FJ874043 GQ232929 HM116184 EF583683 EF175392 EU099153 GQ232967 GU358675 EF583681 EU099116 GU358674 JF810254 EF091907 EF175405 EU667599 EF091906 EF091908 EF091909 EF091910 EF175388 EF175390 EF175395 EF175406 EF175412 EF175417 EF175418 EF175420 EF175428 EF407848 EF441755 EU099106 EU350411 EU350412 EU433866 EU433872 EU433873 EU433879 EU667594 EU667595 EU667596 EU667597 EU667598 EU814958 EU814959 EU814960 EU814963 EU814966 FJ694873 FJ694874 GQ232838 GQ232965 GU358670 GU358676 GU358678 GU358682 JF810255 JF810274 AF103216 EF175425 EF583662 EF583663 EF583664 EF583665 EF583667 EF583673 EF583674 EF583675 EF583682 EU350410 M35478 EF407834 EF566907 EF407828 EF407830 EF583660 DQ100847 AY998726 AF209884 AJ007325 EF473862 EU099204 U86786 U86795 U86797 AF308545 AF308549 AF308553 AF308554 AF308559 AF308560 AF308561 EU090245 GQ903485 GQ903489 GQ903492 EU099120 GQ903503 AJ239384 EU099100 EU099208 Z80841 AF103052 AF103307 EU099086 EU099105 EU099142 EU099250 EU099176 EU099293 HM774304 AY515008 EU099141 EU099212 JN110763 JN110845 JN110914 JN111163 L04334 L04335 L04344 FJ385405 FJ385410 FJ385424 FJ385430 FJ385431 HM774065 HM774083 HM774091 HM774102 HM774365 HM774646 HM774653 HM774656 HM774681 HM774757 HM774769 HM774771 HM774786 HM774863 HM774965 HM775047 AF103339 AY515006 DQ523992 EU099090 EU099092 EU099115 EU099162 EU099179 EU099210 EU099218 EU099282 DQ097895 EF624069 EF624074 EF624075 EF624077 EF624128 EF624129 EF624130 EF624131 EF624138 EF624140 EF624141 EF624143 EF624174 EF624175 EF624176 EF624177 EF624179 EF624180 EF624182 EF624183 EF624184 EF624185 EF624186 EF624187 EF624188 EF624189 EF624190 EF624191 EF624192 EF624193 EU099060 EU099066 EU099128 EU099129 EU099145 EU099158 EU099160 EU099161 EU099165 EU099177 EU099178 EU099180 EU099247 EU146320 EU146330 EU146331 EU146336 EU146348 EU146349 EU146350 EU146351 EU146352 EU146353 EU146354 EU146355 EU146356 EU146357 EU146359 EU146383 EU146385 EU146386 M98324 AY393263 AY393515 DQ524120 EU090241 EU099081 EU099095 EU099099 EU099103 EU099111 EU099121 EU099135 EU099136 EU099164 EU099170 EU099174 EU099189 EU099205 EU099207 EU099209 EU099220 AF306353 AJ132852 AM259138 L12098 AF035025 AY392856 AY392858 AY393000 AY393010 AY393106 AY393123 AY393128 AY393133 AY393135 AY393137 AY393138 AY393233 AY393338 AY393342 AY393350 AY393373 AY393495 AY393496 AY393501 AY393503 AY393504 AY393508 AY393513 AY393514 AY393516 AY393517 AY393518 AY393519 AY393520 AY393522 AY393523 AY393525 AY393528 AY393532 AY393535 AY393538 AY393539 AY393540 AY393541 AY393542 AY393543 AY393544 AY393545 AY393546 AY393604 AY393611 AY393682 DQ100913 EU099069 EU099072 EU099083 EU099117 EU099138 EU099167 EU099168 EU099171 EU099175 EU099188 EU099198 EU099201 EU099202 EU099211 EU099219 EU099236 HM994945 AY574947 AY093586 AY093587 DQ100805 DQ100924 JN158773 AY093585 AF035785 AF098366 AY781822 DQ100688 DQ523989 HM995306 U00502 DQ100709 DQ100908 DQ523957 DQ524013 DQ524031 DQ524041 DQ524127 HM994992 HM994994 HM994997 HM994998 HM995013 HM995114 HM995174 HM995178 HM995180 HM995227 HM995241 HM995248 HM995283 HM995304 HM995307 HM995375 HM995447 HM995450 HM995512 HM995517 HM995520 HM995558 HM995678 HM995679 HM995680 HM995681 HM995682 HM995683 HM995684 HM995685 HM995744 HM996065 HM996269 HM996387 AF004321 AB063837 AB063906 AB063914 AB067012 AB067013 AB067018 AB067022 AB067235 AB363092 AF099200 AF174076 AY781868 AY866799 AY941859 DQ065663 DQ065677 DQ065701 DQ840709 DQ926327 EF178030 FJ195540 FJ385306 FJ385381 GQ856069 GQ903493 GQ903497 GQ903502 GQ903514 Z92894 AB027437 AB063666 AB063701 AB063715 AB063720 AB063763 AB063768 AB063778 AB063780 AB063785 AB063831 AB063902 AB063903 AB063921 AB066830 AB066835 AB066837 AB066840 AB066841 AB066842 AB066843 AB066928 AB066936 AB066939 AB066942 AB066944 AB066948 AB066949 AB066953 AB067158 AB067170 AB067305 AB067309 AB067333 AB067383 AB363078 AB363086 AB363094 AB363097 AB373608 AF021950 AF021951 AF021952 AF021970 AF021992 AF035784 AF062098 AF062127 AF062189 AF062216 AF062283 AF115114 AF115115 AF115116 AF115118 AF115119 AF174042 AF174065 AF174069 AF174073 AF174096 AF174109 AF174126 AF193848 AF217789 AF408721 AF460964 AF460965 AJ239346 AJ239357 AJ239365 AJ239372 AJ239376 AJ389170 AJ389172 AJ389179 AJ389181 AJ413995 AJ414000 AJ414001 AJ414002 AJ414004 AJ414008 AJ414009 AJ414010 AJ414015 AJ414017 AJ414020 AJ414021 AJ414023 AJ414027 AJ416562 AJ555258 AJ555262 AJ555275 AM040567 AY033246 AY055485 AY059634 AY281328 AY281329 AY466503 AY485361 AY553640 AY557623 AY557624 AY557625 AY557626 AY557627 AY561708 AY577304 AY781812 AY927666 AY941846 AY941940 D16837 DQ100681 DQ100723 DQ100733 DQ100777 DQ100808 DQ100811 DQ100820 DQ100839 DQ100902 DQ100906 DQ100912 DQ100952 DQ212523 DQ490739 DQ926531 EF555585 EF624068 EF624070 EF624071 EF624072 EF624073 EF624078 EF624079 EF624132 EF624136 EF624178 EF624181 EF624194 EF624195 EU202446 EU202448 EU835547 EU835554 FJ039781 FJ039784 FJ385379 GQ903484 GQ903486 GQ903487 GQ903490 GQ903491 GQ903495 GQ903496 GQ903498 GQ903500 GQ903501 GQ903504 GQ903507 GQ903509 GQ903511 GU570264 GU570271 GU570274 HM152493 HM152496 HM152502 HM152504 HM152527 HQ378401 HQ392874 HQ689778 HQ689781 JN158782 JN159449 JN159454 L14454 L23519 S73955 U00518 U00550 U00583 U71105 U85240 U89903 X64237 X67903 Z18841 Z34906 Z34908 Z34957 Z34959 Z34960 Z34961 Z34962 Z34963 AY927663 JN158517 DQ535261 DQ535284 DQ535416 DQ535445 DQ535451 DQ535460 EF177997 EF178006 EF178014 GU570268 Z35123 M18516 AF062105 AF062117 AF062156 AF062161 AF062175 AF062193 AF062198 AF062208 AF174026 AY172957 L06923 M62723 X65889 Z14214 Z47222 Z47224 Z47227 Z47233 Z47244 Z47245 Z47246 Z47247 Z47248 Z47249 Z47250 Z47251 Z47252 Z47253 Z47254 Z47255 Z47256 Z47257 Z47258 Z47259 Z47260 Z47261 Z47262 Z47263 Z47264 Z47265 Z47266 Z47267 Z47268 Z47269 Z47270 Z47271 Z47272 Z47273 Z80837 Z80853 CU688244 L23561 M24669 M24670 TSC_hg19_v1_chr14_-_107170387 BC062336	22136	-	M87789 L29121 BC069016 L08086 AK123800 BC025314 BC026038 AK131045 AK126133 AK130642 TSC_hg19_v1_chr14_-_107170426 AK097360 AK097364 AK128394 AK307688 BC016381 AK096985 AK097305 AK097356 AK123070 AK129512 AK129622 AK129777 AK130786 AK131065 BC070333 AK097361 AK097363 AK058027 AK129809	22316	-	FJ840101 FJ840103 FJ840105 FJ840106 FJ840110 FJ840116 FJ840119 FJ840153 FJ840184 FJ840185 FJ840188 FJ840189 FJ840190 FJ840192 FJ840197 FJ840199 FJ840203 FJ840206 FJ840207 FJ840208 FJ840209 FJ873863 FJ873875 FJ873894 FJ873921 FJ873929 FJ873938 FJ873947 FJ873950 FJ873952 FJ873965 FJ873977 FJ873996 FJ873997 FJ873999 FJ874008 FJ874014 FJ874026 FJ874040 FJ874044 FJ874061 FJ874068 FJ874078 FJ874079 FJ874080 HM116116 HM116121 HM116146 HM116172 HM116181 HM116193 HM116196 HM116197 HM116201 HM116225 GQ232804 GQ232899 AY003747 AY392896 AY393031 AY393032 AY393052 AY393293 AY393389 AY393434 AY393562 AF103042 AF459629 HM774620 HM774632 AM183987 AM279526 AY312400 EF177989 DQ926546 AJ389183 DQ100956 DQ926096 U00507 AB066845 AB066846 AB066847 AB066848 AB066849 AB066853 AB066854 AB066855 AB066856 AB066860 AB066863 AB066867 AB066872 AB066875 AB066876 AB067169 AB067183 AB067187 AB067188 AB067191 AB067197 AB067198 AB067200 AB067201 AB067203 AB067204 AB067205 AB067206 AB067207 AB067208 AB067209 AB067210 AB067211 AB067212 AB067213 AB067215 AB067216 AB067217 AB067219 AB067220 AB067227 AB067230 AF062247 AF174045 AF174063 AF174117 AF442758 AJ239338 AJ239347 AJ389184 AY781820 AY941845 DQ926224 DQ926451 FJ385297 GU570281 GU570282 HQ378332 U00575 U77371 X79160 Z80836 DQ535270 DQ535432 L28050 M34027 AF062153 AJ131058 AY190826 L21960 TSC_hg19_v1_chr14_-_107179280 AK097955	31091	-	AK097017|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130433|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073782|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF067420|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF035025|IGHV1-69|28461|immunoglobulin heavy variable 1-69##BC062336|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##M87789|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC069016|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123800|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC025314|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC026038|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126133|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK130642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097360|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097364|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128394|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016381|IGHM|3507|immunoglobulin heavy constant mu##AK096985|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097305|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097356|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123070|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129512|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129622|IGHM|3507|immunoglobulin heavy constant mu##AK129777|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK131065|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC070333|IGHV1-69|28461|immunoglobulin heavy variable 1-69##AK097361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097363|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058027|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129809|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097955|IGHA1|3493|immunoglobulin heavy constant alpha 1	3.973815	CTCF.p2:18:0.929	CTCF.p2:-20:0.999	CTCF.p2:-40:0.987	CTCF.p2:77:0.989
chr19	6772526	6772706	reg1015065.p2	4.824	+	TSC_hg19_v1_chr19_-_6767447 AK225386 AK292781 AK299406 AK310659 BC006281 AF124249 AY358406 NM_005490 AK290293	-5109	-	TSC_hg19_v1_chr19_+_6739712 NM_004240 AK313296 AB007845 AB072596 AK223109 AF502289 AJ000414 AY081141 BC013002 CU680464 DQ892747 DQ895993 AF380114 BT006698 BT020167 BT020171 CR536513	-32882	+	TSC_hg19_v1_chr19_-_6737615 BC146909 AX775899 NM_001080452	-34998	-	TSC_hg19_v1_chr19_+_6772718 NM_005428 AK225710 AK313307	108	+	TSC_hg19_v1_chr19_+_6772811 AB590871	192	+	BC059395 NM_001974 X81479 AK297003 AK131562 AK290401 AK291518 AK313495 AK297011 CU687372	114981	+	AK225386|SH2D3A|10045|SH2 domain containing 3A##AK292781|SH2D3A|10045|SH2 domain containing 3A##AK299406|SH2D3A|10045|SH2 domain containing 3A##AK310659|SH2D3A|10045|SH2 domain containing 3A##BC006281|SH2D3A|10045|SH2 domain containing 3A##AF124249|SH2D3A|10045|SH2 domain containing 3A##AY358406|SH2D3A|10045|SH2 domain containing 3A##NM_005490|SH2D3A|10045|SH2 domain containing 3A##AK290293|SH2D3A|10045|SH2 domain containing 3A##NM_004240|TRIP10|9322|thyroid hormone receptor interactor 10##AK313296|TRIP10|9322|thyroid hormone receptor interactor 10##AB007845|TRIP10|9322|thyroid hormone receptor interactor 10##AB072596|TRIP10|9322|thyroid hormone receptor interactor 10##AK223109|TRIP10|9322|thyroid hormone receptor interactor 10##AF502289|TRIP10|9322|thyroid hormone receptor interactor 10##AJ000414|TRIP10|9322|thyroid hormone receptor interactor 10##AY081141|TRIP10|9322|thyroid hormone receptor interactor 10##BC013002|TRIP10|9322|thyroid hormone receptor interactor 10##DQ892747|TRIP10|9322|thyroid hormone receptor interactor 10##DQ895993|TRIP10|9322|thyroid hormone receptor interactor 10##AF380114|TRIP10|9322|thyroid hormone receptor interactor 10##BT006698|TRIP10|9322|thyroid hormone receptor interactor 10##BT020167|TRIP10|9322|thyroid hormone receptor interactor 10##BT020171|TRIP10|9322|thyroid hormone receptor interactor 10##CR536513|TRIP10|9322|thyroid hormone receptor interactor 10##BC146909|GPR108|56927|G protein-coupled receptor 108##AX775899|GPR108|56927|G protein-coupled receptor 108##NM_001080452|GPR108|56927|G protein-coupled receptor 108##NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor##BC059395|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_001974|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##X81479|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297003|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK131562|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK290401|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK291518|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK313495|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297011|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1	0.0	
chr8	11341309	11341490	reg1022974.p1	4.824	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-17170	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-136395	-	AJ291677 NM_054028 BC131696	-152889	+	S76617 NM_001715 BC018703 BC004473 BC038555	10194	+	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	220321	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	285869	+	AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##AJ291677|SLC35G5|83650|solute carrier family 35, member G5##NM_054028|SLC35G5|83650|solute carrier family 35, member G5##BC131696|SLC35G5|83650|solute carrier family 35, member G5##S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)	0.0	
chrX	110343556	110343653	reg1024475.p1	4.824	+	NM_002578 TSC_hg19_v1_chrX_+_110339395	-4203	+	AK290504 NM_001128166 NM_001128167 TSC_hg19_v1_chrX_+_110187624 AK315284	-156057	+	NM_001143981 NM_001143982 NM_001143983	-304319	-	NM_001128168 NM_001128172 NM_001128173 AB102659 AF068864 AM943850 AM943851 AM943852	22713	+	TSC_hg19_v1_chrX_-_110513712 AF029232 AK312701	170100	-	AJ000388 TSC_hg19_v1_chrX_-_110513775 NM_014289	170159	-	NM_002578|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001143981|CHRDL1|91851|chordin-like 1##NM_001143982|CHRDL1|91851|chordin-like 1##NM_001143983|CHRDL1|91851|chordin-like 1##NM_001128168|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128172|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128173|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AB102659|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AF068864|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943850|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943851|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AM943852|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AF029232|CAPN6|827|calpain 6##AK312701|CAPN6|827|calpain 6##AJ000388|CAPN6|827|calpain 6##NM_014289|CAPN6|827|calpain 6	0.983163	CTCF.p2:-5:0.983
chr22	19879164	19879319	reg1029450.p1	4.823	+	TSC_hg19_v1_chr22_-_19842398 BC012060 NM_024627 BC008696 AB051432 AL832509 AF301895 AF238328 AY007378 NM_053004	-36836	-	TSC_hg19_v1_chr22_-_19842337 AK291262 BX640785 BX640969 BX640998	-36900	-	AF012130 AF012131 AF373867 NM_005992 NM_080646 NM_080647	-135016	+	TSC_hg19_v1_chr22_-_19929293 AB209724	50037	-	NM_000754 TSC_hg19_v1_chr22_+_19929294	50039	+	M58525 TSC_hg19_v1_chr22_+_19929321 AK130031 AK290440 BC000419 BC005867	50082	+	BC012060|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_024627|C22orf29|79680|chromosome 22 open reading frame 29##BC008696|C22orf29|79680|chromosome 22 open reading frame 29##AB051432|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AL832509|C22orf29|79680|chromosome 22 open reading frame 29##AF301895|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AF238328|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AY007378|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_053004|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AK291262|C22orf29|79680|chromosome 22 open reading frame 29##BX640785|C22orf29|79680|chromosome 22 open reading frame 29##BX640969|C22orf29|79680|chromosome 22 open reading frame 29##BX640998|C22orf29|79680|chromosome 22 open reading frame 29##AF012130|TBX1|6899|T-box 1##AF012131|TBX1|6899|T-box 1##AF373867|TBX1|6899|T-box 1##NM_005992|TBX1|6899|T-box 1##NM_080646|TBX1|6899|T-box 1##NM_080647|TBX1|6899|T-box 1##AB209724|TXNRD2|10587|thioredoxin reductase 2##NM_000754|COMT|1312|catechol-O-methyltransferase##M58525|COMT|1312|catechol-O-methyltransferase##AK130031|COMT|1312|catechol-O-methyltransferase##AK290440|COMT|1312|catechol-O-methyltransferase##BC000419|COMT|1312|catechol-O-methyltransferase##BC005867|COMT|1312|catechol-O-methyltransferase	0.0	
chr5	116006856	116007036	reg1023444.p1	4.823	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-96432	-	TSC_hg19_v1_chr5_+_115898220 D28352	-108722	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-586225	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2317292	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2399865	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2400219	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr6	139236905	139237085	reg1028615.p1	4.823	+	NM_001077706 NM_001195037	-119748	+	AK092592 AX747618 NM_001242740	-142194	-	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	-142205	+	BC021211 TSC_hg19_v1_chr6_-_139309122 AB209143	72082	-	TSC_hg19_v1_chr6_-_139309357 BC035286 AK312938	72353	-	TSC_hg19_v1_chr6_-_139309391 BC012764 NM_001128617 NM_031922	72415	-	NM_001077706|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##NM_001195037|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##AK092592|LOC100507462|100507462|uncharacterized LOC100507462##NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A##BC021211|REPS1|85021|RALBP1 associated Eps domain containing 1##AB209143|REPS1|85021|RALBP1 associated Eps domain containing 1##BC035286|REPS1|85021|RALBP1 associated Eps domain containing 1##AK312938|REPS1|85021|RALBP1 associated Eps domain containing 1##BC012764|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_001128617|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_031922|REPS1|85021|RALBP1 associated Eps domain containing 1	0.0	
chr9	132785606	132785713	reg1025533.p2	4.823	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-187894	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-187937	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-187975	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	19695	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	19829	-	BC039728 NM_001136557 NM_001136558 NM_020960	30325	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr1	2478528	2478670	reg1028767.p2	4.822	+	BC087840 DQ272660 NM_001010926	-16916	-	TSC_hg19_v1_chr1_-_2458040 AL442072 BC043496 AK001644 AK223546 AK303127 AK309860 NM_018216 AK295301	-20535	-	DQ176850 NM_014638 BC144620	-70842	+	AK300515 NM_003820 U70321 AK303468 BC029848 BC002794 BC018882 U81232 AF153978 AK310076 AB208808 AY358879 CU678202 AB590572 DQ893000 DQ896755 AF373877 AF373878 CR456909	9354	+	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	39589	+	TSC_hg19_v1_chr1_+_2518534 AK094901	39915	+	BC087840|HES5|388585|hairy and enhancer of split 5 (Drosophila)##DQ272660|HES5|388585|hairy and enhancer of split 5 (Drosophila)##NM_001010926|HES5|388585|hairy and enhancer of split 5 (Drosophila)##AL442072|PANK4|55229|pantothenate kinase 4##BC043496|PANK4|55229|pantothenate kinase 4##AK001644|PANK4|55229|pantothenate kinase 4##AK223546|PANK4|55229|pantothenate kinase 4##AK303127|PANK4|55229|pantothenate kinase 4##AK309860|PANK4|55229|pantothenate kinase 4##NM_018216|PANK4|55229|pantothenate kinase 4##AK295301|PANK4|55229|pantothenate kinase 4##DQ176850|PLCH2|9651|phospholipase C, eta 2##NM_014638|PLCH2|9651|phospholipase C, eta 2##BC144620|PLCH2|9651|phospholipase C, eta 2##AK300515|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##NM_003820|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U70321|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK303468|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC029848|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC002794|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC018882|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U81232|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF153978|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK310076|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AB208808|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AY358879|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ893000|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ896755|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373877|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373878|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##CR456909|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B##AK094901|FAM213B|127281|family with sequence similarity 213, member B	0.0	
chr18	20933668	20933767	reg1028680.p2	4.822	+	BC037218 NM_138375	-197929	+	EF028204 NM_001100619	-217991	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-419902	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	84154	-	AK057292 NM_003831	99069	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	99529	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.0	
chrX	114990559	114990739	reg1006231.p2	4.822	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-162781	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-193607	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-195043	+	BC003645 TSC_hg19_v1_chrX_-_115085443	94790	-	AK313927 NM_000686 X87723 U16957	311346	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	577118	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr1	101854398	101854576	reg1024650.p1	4.821	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-151917	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-152106	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-363054	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	608000	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	608303	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1642296	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.0	
chr2	113841971	113842120	reg1027809.p2	4.821	+	AF334755 NM_032556	-12151	+	AY029413 NM_173161 BC103966 BC103967 BC103968 AY358846	-16493	+	AF186094 NM_012275 AJ242737 AK290249 AY359117	-25309	+	AF043143 NM_000577 NM_173841 NM_173843 M55646 AK290898 X84348 BC009745	33472	+	NM_173842 TSC_hg19_v1_chr2_+_113885141	43094	+	TSC_hg19_v1_chr2_+_113885174 AK290926 X52015 X53296 AB529162	43159	+	AF334755|IL1F10|84639|interleukin 1 family, member 10 (theta)##NM_032556|IL1F10|84639|interleukin 1 family, member 10 (theta)##AY029413|IL1F10|84639|interleukin 1 family, member 10 (theta)##NM_173161|IL1F10|84639|interleukin 1 family, member 10 (theta)##BC103966|IL1F10|84639|interleukin 1 family, member 10 (theta)##BC103967|IL1F10|84639|interleukin 1 family, member 10 (theta)##BC103968|IL1F10|84639|interleukin 1 family, member 10 (theta)##AY358846|IL1F10|84639|interleukin 1 family, member 10 (theta)##AF186094|IL36RN|26525|interleukin 36 receptor antagonist##NM_012275|IL36RN|26525|interleukin 36 receptor antagonist##AJ242737|IL36RN|26525|interleukin 36 receptor antagonist##AK290249|IL36RN|26525|interleukin 36 receptor antagonist##AY359117|IL36RN|26525|interleukin 36 receptor antagonist##AF043143|IL1RN|3557|interleukin 1 receptor antagonist##NM_000577|IL1RN|3557|interleukin 1 receptor antagonist##NM_173841|IL1RN|3557|interleukin 1 receptor antagonist##NM_173843|IL1RN|3557|interleukin 1 receptor antagonist##M55646|IL1RN|3557|interleukin 1 receptor antagonist##AK290898|IL1RN|3557|interleukin 1 receptor antagonist##X84348|IL1RN|3557|interleukin 1 receptor antagonist##BC009745|IL1RN|3557|interleukin 1 receptor antagonist##NM_173842|IL1RN|3557|interleukin 1 receptor antagonist##AK290926|IL1RN|3557|interleukin 1 receptor antagonist##X52015|IL1RN|3557|interleukin 1 receptor antagonist##X53296|IL1RN|3557|interleukin 1 receptor antagonist	0.84727	CTCF.p2:-7:0.847
chr3	16090125	16090272	reg1000446.p1	4.821	+	AB002377 NM_015199 TSC_hg19_v1_chr3_-_15901096	-189186	-	TSC_hg19_v1_chr3_-_15839678 AK293770 NM_001195098	-250516	-	AY367056 NM_001195099 BC035170 BC048975	-292121	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	125996	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	216191	-	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	216510	+	AB002377|ANKRD28|23243|ankyrin repeat domain 28##NM_015199|ANKRD28|23243|ankyrin repeat domain 28##AK293770|ANKRD28|23243|ankyrin repeat domain 28##NM_001195098|ANKRD28|23243|ankyrin repeat domain 28##AY367056|ANKRD28|23243|ankyrin repeat domain 28##NM_001195099|ANKRD28|23243|ankyrin repeat domain 28##BC035170|ANKRD28|23243|ankyrin repeat domain 28##BC048975|ANKRD28|23243|ankyrin repeat domain 28##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1	0.0	
chr6	155569460	155569641	reg1002174.p1	4.821	+	NM_001010927 AK299723 BC066979 AF120324 BC022469	-31422	+	NM_012454	-158128	+	TSC_hg19_v1_chr6_+_155054812 AB029039	-514725	+	BC020838 NM_001001346	15596	+	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	66035	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	66073	-	NM_001010927|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AK299723|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC066979|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AF120324|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##BC022469|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##NM_012454|TIAM2|26230|T-cell lymphoma invasion and metastasis 2##AB029039|SCAF8|22828|SR-related CTD-associated factor 8##BC020838|CLDN20|49861|claudin 20##NM_001001346|CLDN20|49861|claudin 20##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial	0.0	
chr9	131549368	131549516	reg1028156.p2	4.821	+	TSC_hg19_v1_chr9_-_131534207 BC052563 NM_006336	-15184	-	TSC_hg19_v1_chr9_-_131534148 AK314911 BC033884	-15425	-	CU690564 BC009280 BC048251 TSC_hg19_v1_chr9_-_131486407 AK027430 AK075332 AK315746 AK092843 AX747760 NM_032799	-63053	-	NM_018201 TSC_hg19_v1_chr9_+_131549531	78	+	TSC_hg19_v1_chr9_+_131549578 AK289777 BC150311 AK123828 BC014898 BC132817 BC136509 AK001605 BC140080 BC143010 HQ258408 AB449899	154	+	TSC_hg19_v1_chr9_+_131580758 BC016351 NM_004435 X79444 BC004922 AB590755	31397	+	BC052563|ZER1|10444|zer-1 homolog (C. elegans)##NM_006336|ZER1|10444|zer-1 homolog (C. elegans)##AK314911|ZER1|10444|zer-1 homolog (C. elegans)##BC033884|ZER1|10444|zer-1 homolog (C. elegans)##BC009280|ZDHHC12|84885|zinc finger, DHHC-type containing 12##BC048251|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK027430|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK075332|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK315746|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK092843|ZDHHC12|84885|zinc finger, DHHC-type containing 12##NM_032799|ZDHHC12|84885|zinc finger, DHHC-type containing 12##NM_018201|TBC1D13|54662|TBC1 domain family, member 13##AK289777|TBC1D13|54662|TBC1 domain family, member 13##BC150311|TBC1D13|54662|TBC1 domain family, member 13##AK123828|TBC1D13|54662|TBC1 domain family, member 13##BC014898|TBC1D13|54662|TBC1 domain family, member 13##BC132817|TBC1D13|54662|TBC1 domain family, member 13##BC136509|TBC1D13|54662|TBC1 domain family, member 13##AK001605|TBC1D13|54662|TBC1 domain family, member 13##BC140080|TBC1D13|54662|TBC1 domain family, member 13##BC143010|TBC1D13|54662|TBC1 domain family, member 13##HQ258408|TBC1D13|54662|TBC1 domain family, member 13##AB449899|TBC1D13|54662|TBC1 domain family, member 13##BC016351|ENDOG|2021|endonuclease G##NM_004435|ENDOG|2021|endonuclease G##X79444|ENDOG|2021|endonuclease G##BC004922|ENDOG|2021|endonuclease G	0.0	
chr10	64564064	64564181	reg1024822.p1	4.820	+	AJ505150 NM_199452	-283916	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-430079	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-535583	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	420	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	535	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	11975	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.0	
chr2	242211472	242211548	reg1019861.p2	4.820	+	AY617079 AY617080 NM_001001666 NM_001001891	-83587	+	AK294043 TSC_hg19_v1_chr2_+_242089896 BC013001 BC000910 NM_002712 Z50749 BC012397 AB385583 BT007296 BT020134	-121619	+	CR749231 NM_001252120	-122117	-	TSC_hg19_v1_chr2_-_242212216 M64098	710	-	TSC_hg19_v1_chr2_-_242212245 AK300312 NM_001243900 NM_203346	734	-	TSC_hg19_v1_chr2_-_242212511 AK309075	1006	-	AY617079|ANO7|50636|anoctamin 7##AY617080|ANO7|50636|anoctamin 7##NM_001001666|ANO7|50636|anoctamin 7##NM_001001891|ANO7|50636|anoctamin 7##AK294043|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC013001|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC000910|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##NM_002712|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##Z50749|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC012397|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT007296|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT020134|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##CR749231|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252120|PASK|23178|PAS domain containing serine/threonine kinase##M64098|HDLBP|3069|high density lipoprotein binding protein##AK300312|HDLBP|3069|high density lipoprotein binding protein##NM_001243900|HDLBP|3069|high density lipoprotein binding protein##NM_203346|HDLBP|3069|high density lipoprotein binding protein##AK309075|HDLBP|3069|high density lipoprotein binding protein	0.0	
chr2	72553126	72553222	reg1026446.p1	4.820	+	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	-178232	-	AK295683 TSC_hg19_v1_chr2_-_72371202	-181975	-	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-859281	+	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	499930	-	TSC_hg19_v1_chr2_+_73114529 NM_003124 AK222942 M76231 BC017310 AK291856 DQ891699 DQ894880	561356	+	BC045762 NM_004097 TSC_hg19_v1_chr2_+_73144689	591479	+	AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B##NM_003124|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK222942|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##M76231|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC017310|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##AK291856|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ891699|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##DQ894880|SPR|6697|sepiapterin reductase (7,8-dihydrobiopterin:NADP+ oxidoreductase)##BC045762|EMX1|2016|empty spiracles homeobox 1##NM_004097|EMX1|2016|empty spiracles homeobox 1	0.827419	CTCF.p2:-9:0.827
chr5	131550279	131550370	reg1039154.p1	4.820	+	M11220 NM_000758 BC113924 BC113999 BC108724 M11734 M10663 AY720441 AB591004 AF510855	-140799	+	M20137 NM_000588 BC069472 BC066272 BC066273 BC066274 BC066275 BC066276 M17115 M14743 CU686832 HQ448457	-153952	+	AK314452 BC047453 NM_001205248 NM_001205251 BC026161 NM_001205250 DQ655980	-202631	-	NM_001017973 NM_004199 BC017062	12619	-	TSC_hg19_v1_chr5_-_131563545 AY358970 BC025960 BC035813 BX647924 NM_001017974 NM_001142598 NM_001142599	13194	-	TSC_hg19_v1_chr5_+_131593340 BC016765 NM_001131027 NM_003687 AF154335	43029	+	M11220|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_000758|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113924|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113999|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC108724|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M11734|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M10663|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AY720441|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AF510855|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M20137|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##NM_000588|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC069472|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066272|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066273|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066274|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066275|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066276|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M17115|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M14743|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##HQ448457|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##AK314452|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC047453|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205248|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205251|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC026161|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205250|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##DQ655980|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001017973|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_004199|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC017062|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##AY358970|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC025960|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC035813|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BX647924|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001017974|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142598|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142599|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC016765|PDLIM4|8572|PDZ and LIM domain 4##NM_001131027|PDLIM4|8572|PDZ and LIM domain 4##NM_003687|PDLIM4|8572|PDZ and LIM domain 4##AF154335|PDLIM4|8572|PDZ and LIM domain 4	0.0	
chr12	42631311	42631444	reg1029169.p1	4.819	+	TSC_hg19_v1_chr12_-_42538503 AK125141 NM_001099650 NM_173601 BC030023	-92798	-	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	-799790	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	-1049169	+	CU691510 EU446625 EU446756 AB527838 TSC_hg19_v1_chr12_-_42632024 BC037777 AK127531 AK291355 AK296191 AK294260 NM_001190977	658	-	NM_001190979 NM_001190980 NM_005748 TSC_hg19_v1_chr12_-_42632167	794	-	AK308244 TSC_hg19_v1_chr12_-_42719921 BC005099 BC010177 BC022543 AB062361 NM_033114	88498	-	AK125141|GXYLT1|283464|glucoside xylosyltransferase 1##NM_001099650|GXYLT1|283464|glucoside xylosyltransferase 1##NM_173601|GXYLT1|283464|glucoside xylosyltransferase 1##BC030023|GXYLT1|283464|glucoside xylosyltransferase 1##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##EU446625|YAF2|10138|YY1 associated factor 2##EU446756|YAF2|10138|YY1 associated factor 2##BC037777|YAF2|10138|YY1 associated factor 2##AK127531|YAF2|10138|YY1 associated factor 2##AK291355|YAF2|10138|YY1 associated factor 2##AK296191|YAF2|10138|YY1 associated factor 2##AK294260|YAF2|10138|YY1 associated factor 2##NM_001190977|YAF2|10138|YY1 associated factor 2##NM_001190979|YAF2|10138|YY1 associated factor 2##NM_001190980|YAF2|10138|YY1 associated factor 2##NM_005748|YAF2|10138|YY1 associated factor 2##AK308244|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC005099|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC010177|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC022543|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##AB062361|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##NM_033114|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1	0.025637	
chr1	43196856	43196957	reg1025769.p2	4.819	+	BC020164 TSC_hg19_v1_chr1_+_43162416	-34505	+	TSC_hg19_v1_chr1_+_43148644 BC013838	-48322	+	TSC_hg19_v1_chr1_+_43148189 DQ891609 DQ894802 AB385072	-48696	+	AF497644 BC030524 AK298992 AK096063 AK291197 NM_001123395 NM_001185117 NM_148960	8922	-	AK027680 AK297980 TSC_hg19_v1_chr1_-_43232700 BC091513 BC143961 BC143962 AK075418 BC004160 AK027648 AF097431 AF097432 BC108311 AK027697 AK300210 BC068461	35782	-	TSC_hg19_v1_chr1_-_43232730 NM_001146289 NM_001243246 NM_022356	35836	-	BC020164|YBX1|4904|Y box binding protein 1##BC013838|YBX1|4904|Y box binding protein 1##DQ891609|YBX1|4904|Y box binding protein 1##DQ894802|YBX1|4904|Y box binding protein 1##AF497644|CLDN19|149461|claudin 19##BC030524|CLDN19|149461|claudin 19##AK298992|CLDN19|149461|claudin 19##AK096063|CLDN19|149461|claudin 19##AK291197|CLDN19|149461|claudin 19##NM_001123395|CLDN19|149461|claudin 19##NM_001185117|CLDN19|149461|claudin 19##NM_148960|CLDN19|149461|claudin 19##AK027680|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK297980|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC091513|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC143961|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC143962|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK075418|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC004160|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK027648|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AF097431|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AF097432|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC108311|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK027697|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK300210|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC068461|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_001146289|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_001243246|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##NM_022356|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1	0.076257	
chr3	179367488	179367628	reg1037177.p1	4.819	+	TSC_hg19_v1_chr3_+_179322594 NM_001199957 NM_001199958 NM_002492 BX648034 BC005271 BC009796 AK313822 AF047181 BC093071 BC017909 CU679497	-44965	+	AY212270 BC032522 TSC_hg19_v1_chr3_-_179322427 BC021575 NM_020409 NM_177988	-45136	-	AB061315 AK223212 TSC_hg19_v1_chr3_+_179280751 AK021756 AB015907 BC001391 AB590675 EU832285 EU832370 CR533529 CU674682	-86745	+	TSC_hg19_v1_chr3_+_179370901 NM_003940 U75362 BC016146 AK290338 AM393315 AM393392 AM393610 AM393780 DQ892472 DQ895684	3337	+	AB032593 NM_016559 AB032592 TSC_hg19_v1_chr3_-_179754937 AK299633 AK294501 AK314283 BC036183	387168	-	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	952445	+	NM_001199957|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_001199958|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AY212270|MRPL47|57129|mitochondrial ribosomal protein L47##BC032522|MRPL47|57129|mitochondrial ribosomal protein L47##BC021575|MRPL47|57129|mitochondrial ribosomal protein L47##NM_020409|MRPL47|57129|mitochondrial ribosomal protein L47##NM_177988|MRPL47|57129|mitochondrial ribosomal protein L47##AB061315|ACTL6A|86|actin-like 6A##AK223212|ACTL6A|86|actin-like 6A##AK021756|ACTL6A|86|actin-like 6A##AB015907|ACTL6A|86|actin-like 6A##BC001391|ACTL6A|86|actin-like 6A##EU832285|ACTL6A|86|actin-like 6A##EU832370|ACTL6A|86|actin-like 6A##CR533529|ACTL6A|86|actin-like 6A##NM_003940|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##U75362|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##BC016146|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AK290338|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393315|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393392|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393610|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393780|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ892472|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ895684|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AB032593|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_016559|PEX5L|51555|peroxisomal biogenesis factor 5-like##AB032592|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK299633|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK294501|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK314283|PEX5L|51555|peroxisomal biogenesis factor 5-like##BC036183|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14	0.991691	CTCF.p2:7:0.992
chr4	153558708	153558861	reg1029144.p1	4.819	+	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	-101351	+	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	-102490	-	NM_001013415 AY008274	-255120	-	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	42416	-	BC037869 NM_145720	142119	-	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	142237	+	AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154##BC037869|TIGD4|201798|tigger transposable element derived 4##NM_145720|TIGD4|201798|tigger transposable element derived 4##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1	0.0	
chr6	11732527	11732707	reg1022576.p2	4.819	+	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-194119	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-350077	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-499707	-	NM_001143948 NM_032744	46662	-	NM_002114	280106	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	557976	+	NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr9	136608374	136608448	reg1010133.p2	4.819	+	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-3425	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-4933	-	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-106903	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	249035	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	324782	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	325215	-	BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3	0.0	
chrX	53122399	53122550	reg1027627.p1	4.819	+	TSC_hg19_v1_chrX_+_53111548 NM_022117 AK131220 AK292462 AY040871 AF273046 BC024270 AL713652 AB463325 AM392716 AF254794	-10832	+	BC009861 NM_018969	-43969	+	BC067819 NM_001242489 NM_001242490 NM_001242492 NM_001242493 NM_001242494 NM_001242495 NM_001242496 NM_001242497 NM_014138	-97828	-	TSC_hg19_v1_chrX_+_53123332 EF565109	932	+	BC054499 BC047751 TSC_hg19_v1_chrX_-_53254393 AK308077 AK304732	131913	-	L25270 NM_001146702 NM_004187 TSC_hg19_v1_chrX_-_53254729	132192	-	NM_022117|TSPYL2|64061|TSPY-like 2##AK131220|TSPYL2|64061|TSPY-like 2##AK292462|TSPYL2|64061|TSPY-like 2##AY040871|TSPYL2|64061|TSPY-like 2##AF273046|TSPYL2|64061|TSPY-like 2##BC024270|TSPYL2|64061|TSPY-like 2##AL713652|TSPYL2|64061|TSPY-like 2##AM392716|TSPYL2|64061|TSPY-like 2##AF254794|TSPYL2|64061|TSPY-like 2##BC009861|GPR173|54328|G protein-coupled receptor 173##NM_018969|GPR173|54328|G protein-coupled receptor 173##BC067819|FAM156A|29057|family with sequence similarity 156, member A##NM_001242489|FAM156A|29057|family with sequence similarity 156, member A##NM_001242490|FAM156A|29057|family with sequence similarity 156, member A##NM_001242492|FAM156A|29057|family with sequence similarity 156, member A##NM_001242493|FAM156A|29057|family with sequence similarity 156, member A##NM_001242494|FAM156A|29057|family with sequence similarity 156, member A##NM_001242495|FAM156A|29057|family with sequence similarity 156, member A##NM_001242496|FAM156A|29057|family with sequence similarity 156, member A##NM_001242497|FAM156A|29057|family with sequence similarity 156, member A##NM_014138|FAM156A|29057|family with sequence similarity 156, member A##EF565109|LOC100132984|100132984|uncharacterized LOC100132984##BC054499|KDM5C|8242|lysine (K)-specific demethylase 5C##BC047751|KDM5C|8242|lysine (K)-specific demethylase 5C##AK308077|KDM5C|8242|lysine (K)-specific demethylase 5C##AK304732|KDM5C|8242|lysine (K)-specific demethylase 5C##L25270|KDM5C|8242|lysine (K)-specific demethylase 5C##NM_001146702|KDM5C|8242|lysine (K)-specific demethylase 5C##NM_004187|KDM5C|8242|lysine (K)-specific demethylase 5C	0.0	
chr10	71396842	71396930	reg1030491.p2	4.818	+	NM_145306 BC013587	-6879	+	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	-63786	-	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	-185553	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	164771	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	164803	+	TSC_hg19_v1_chr10_+_71562275 M59217	165405	+	NM_145306|C10orf35|219738|chromosome 10 open reading frame 35##BC013587|C10orf35|219738|chromosome 10 open reading frame 35##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##M59217|COL13A1|1305|collagen, type XIII, alpha 1	0.512546	CTCF.p2:-2:0.513
chr11	10586386	10586502	reg1030300.p2	4.818	+	BC028123 TSC_hg19_v1_chr11_+_10562846	-23612	+	TSC_hg19_v1_chr11_-_10562724 AK289764 AF214680 BC018104 AK309367 NM_016422	-23706	-	TSC_hg19_v1_chr11_-_10530735 NM_001190702	-55758	-	CU693164 DQ892040 DQ895232 AK300885 BC026231 AF118108 AF127670 TSC_hg19_v1_chr11_-_10590213 AY358925 AK075443 AK312462 NM_006691	3777	-	AK300358 NM_001098579 AF081249	87433	-	TSC_hg19_v1_chr11_-_10715063 AK301296 AK127209 NM_001100167 BC117127	128636	-	BC028123|MRVI1-AS1|100129827|MRVI1 antisense RNA 1 (non-protein coding)##AK289764|RNF141|50862|ring finger protein 141##AF214680|RNF141|50862|ring finger protein 141##BC018104|RNF141|50862|ring finger protein 141##AK309367|RNF141|50862|ring finger protein 141##NM_016422|RNF141|50862|ring finger protein 141##NM_001190702|MTRNR2L8|100463486|MT-RNR2-like 8##DQ892040|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##DQ895232|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK300885|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##BC026231|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AF118108|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AF127670|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AY358925|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK075443|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK312462|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##NM_006691|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog##AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog##AK301296|MRVI1|10335|murine retrovirus integration site 1 homolog##AK127209|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001100167|MRVI1|10335|murine retrovirus integration site 1 homolog##BC117127|MRVI1|10335|murine retrovirus integration site 1 homolog	0.053854	
chr11	35426136	35426277	reg1023879.p1	4.818	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	-147381	-	TSC_hg19_v1_chr11_+_35198199 AK129808	-227994	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-265346	+	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	14505	-	TSC_hg19_v1_chr11_-_35441106 NM_004171	14897	-	S83375 U01824 TSC_hg19_v1_chr11_-_35441572 AK122843 NM_001195728 NM_001252652	15349	-	CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK129808|CD44|960|CD44 molecule (Indian blood group)##AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.767024	CTCF.p2:19:0.767
chr10	104677515	104677696	reg1000546.p2	4.817	+	NM_020682 AK057833 AK225972 AF226730 AK309737 BC119637 BC119638	-48348	+	NM_001136200 NM_144591 AL832477 TSC_hg19_v1_chr10_+_104614015 AK098071 BC015994 BC040069 AK311742	-63604	+	AK308466 BT020000 CU687686 BC062997 BC063388 BC032843 M14564 TSC_hg19_v1_chr10_-_104597171 AK289898 AK094106 AK312235 NM_000102	-80421	-	TSC_hg19_v1_chr10_+_104678078 BC021222 AK023479 NM_017649 NM_199076 NM_199077	452	+	BX648078 TSC_hg19_v1_chr10_-_104953030 BC001595 AK127670 AK291667 AK312517 D38524 NM_001134373 NM_012229	275442	-	BC157875 BC171885 NM_001143909 BC137242 BC137243 BC157829 BC171806	328068	+	NM_020682|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK057833|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK225972|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AF226730|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK309737|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119637|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119638|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32##NM_144591|C10orf32|119032|chromosome 10 open reading frame 32##AL832477|C10orf32|119032|chromosome 10 open reading frame 32##AK098071|C10orf32|119032|chromosome 10 open reading frame 32##BC015994|C10orf32|119032|chromosome 10 open reading frame 32##BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT readthrough##AK311742|C10orf32|119032|chromosome 10 open reading frame 32##AK308466|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BT020000|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC062997|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC063388|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC032843|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##M14564|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK289898|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK094106|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK312235|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##NM_000102|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC021222|CNNM2|54805|cyclin M2##AK023479|CNNM2|54805|cyclin M2##NM_017649|CNNM2|54805|cyclin M2##NM_199076|CNNM2|54805|cyclin M2##NM_199077|CNNM2|54805|cyclin M2##BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II##BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II##AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II##AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II##AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II##D38524|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II##BC157875|LOC729020|729020|rcRPE##BC171885|LOC729020|729020|rcRPE##NM_001143909|LOC729020|729020|rcRPE##BC137242|LOC729020|729020|rcRPE##BC137243|LOC729020|729020|rcRPE##BC157829|LOC729020|729020|rcRPE##BC171806|LOC729020|729020|rcRPE	0.0	
chr11	269443	269624	reg1027546.p2	4.817	+	TSC_hg19_v1_chr11_+_236975 AK295944 AK094775 AK222895 AB009398 BC001100 AF083245 AK307447 AF107837 BC001747 BX647314 AB528493 DQ892171 DQ895365 AF086708 BT007307	-32526	+	AK316175 TSC_hg19_v1_chr11_-_236906 AK308681	-32644	-	NM_002817 NM_175932	-32726	+	AF479748 AY154461 NM_138329	9036	+	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	19609	+	BC150562 BC150563 NM_001025295	29988	-	AK295944|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK094775|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK222895|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AB009398|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001100|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF083245|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK307447|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF107837|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001747|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BX647314|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ892171|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ895365|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF086708|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BT007307|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK316175|SIRT3|23410|sirtuin 3##AK308681|SIRT3|23410|sirtuin 3##NM_002817|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##NM_175932|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF479748|NLRP6|171389|NLR family, pyrin domain containing 6##AY154461|NLRP6|171389|NLR family, pyrin domain containing 6##NM_138329|NLRP6|171389|NLR family, pyrin domain containing 6##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5	0.0	
chr15	32700253	32700391	reg1028216.p1	4.817	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-377579	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-537379	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-537493	-	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	207440	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	233592	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	309935	+	AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1	0.369177	CTCF.p2:27:0.369
chr3	12943377	12943471	reg1031194.p1	4.817	+	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	-1816	-	BC011514 BC070209 X03342 D28385 AK311909 TSC_hg19_v1_chr3_-_12883042 NM_000994 NM_001007073	-60381	-	NM_001007074	-61476	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	65684	-	TSC_hg19_v1_chr3_-_13057189 BC071805	113794	-	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	171174	-	BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1##BC011514|RPL32|6161|ribosomal protein L32##BC070209|RPL32|6161|ribosomal protein L32##X03342|RPL32|6161|ribosomal protein L32##D28385|RPL32|6161|ribosomal protein L32##AK311909|RPL32|6161|ribosomal protein L32##NM_000994|RPL32|6161|ribosomal protein L32##NM_001007073|RPL32|6161|ribosomal protein L32##NM_001007074|RPL32|6161|ribosomal protein L32##AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1	0.0	
chr3	98543291	98543396	reg1026505.p1	4.817	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-91756	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-92098	+	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	-230924	-	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	77149	-	AK311449 NM_001850 NM_020351 AF170702 BC013581	814107	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	993402	+	AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26	0.013844	
chr5	10364517	10364654	reg1029025.p1	4.817	+	TSC_hg19_v1_chr5_+_10354003 AB385356	-10577	+	TSC_hg19_v1_chr5_+_10353836 AK000970 BC136461 BC136462 BC142679 BC142694	-10721	+	TSC_hg19_v1_chr5_+_10353827 AK300034 BC111494 AB011169 AK296585 AK299339 NM_005885	-10771	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	77418	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	77567	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	199857	+	AK000970|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC136461|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC136462|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC142679|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC142694|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##AK300034|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC111494|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##AB011169|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##AK296585|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##AK299339|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##NM_005885|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B	0.995347	CTCF.p2:16:0.995
chr6	86082064	86082171	reg1025480.p1	4.816	+	HQ258462 NM_001080508 BC157841 BC132715	-608192	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	-608947	-	TSC_hg19_v1_chr6_-_85472330 AJ010278	-609792	-	NM_001204813 NM_002526 TSC_hg19_v1_chr6_+_86159433	77255	+	TSC_hg19_v1_chr6_+_86159827 AK314661 AX772810 X55740 BC015940 AK075008 BC065937 DQ186653	77698	+	BC046520 AY044865 CU686683 TSC_hg19_v1_chr6_-_86303440 BC095419	221276	-	HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18##AJ010278|TBX18|9096|T-box 18##NM_001204813|NT5E|4907|5'-nucleotidase, ecto (CD73)##NM_002526|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK314661|NT5E|4907|5'-nucleotidase, ecto (CD73)##X55740|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC015940|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK075008|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC065937|NT5E|4907|5'-nucleotidase, ecto (CD73)##DQ186653|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC046520|SNX14|57231|sorting nexin 14##AY044865|SNX14|57231|sorting nexin 14##BC095419|SNX14|57231|sorting nexin 14	0.917868	CTCF.p2:-19:0.918
chr12	8801271	8801445	reg1024616.p1	4.815	+	AB040431 BC006296 NM_020661	-35919	-	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	-107884	-	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	-135127	+	TSC_hg19_v1_chr12_-_8815272 AK315807 BC005901 AK290585 AK299475	13938	-	TSC_hg19_v1_chr12_-_8815423 U37283 NM_003480	14043	-	AK124368 TSC_hg19_v1_chr12_-_8815486	14124	-	AB040431|AICDA|57379|activation-induced cytidine deaminase##BC006296|AICDA|57379|activation-induced cytidine deaminase##NM_020661|AICDA|57379|activation-induced cytidine deaminase##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##AK315807|MFAP5|8076|microfibrillar associated protein 5##BC005901|MFAP5|8076|microfibrillar associated protein 5##AK290585|MFAP5|8076|microfibrillar associated protein 5##AK299475|MFAP5|8076|microfibrillar associated protein 5##U37283|MFAP5|8076|microfibrillar associated protein 5##NM_003480|MFAP5|8076|microfibrillar associated protein 5##AK124368|MFAP5|8076|microfibrillar associated protein 5	0.0	
chr19	58883894	58883993	reg1027290.p1	4.815	+	BC118983 BC125273 AK124712 AK125350 TSC_hg19_v1_chr19_-_58874199 AK126727 AK172804 AK131209 NM_001207009 NM_198458	-9761	-	TSC_hg19_v1_chr19_-_58864830 AK289417 AF414429 AK055885 AB073611 NM_130786	-19101	-	BX537419 TSC_hg19_v1_chr19_-_58858950 AK056201	-24994	-	TSC_hg19_v1_chr19_-_58892398 BC029960 NM_001129730 NM_138466	8473	-	TSC_hg19_v1_chr19_+_58898635 AK223106 AK311938 D28455 NM_001009 BC015405 BC018828 BC018151 BC035830 U14970	14709	+	NM_001195135	23513	+	BC118983|ZNF497|162968|zinc finger protein 497##BC125273|ZNF497|162968|zinc finger protein 497##AK126727|ZNF497|162968|zinc finger protein 497##AK131209|ZNF497|162968|zinc finger protein 497##NM_001207009|ZNF497|162968|zinc finger protein 497##NM_198458|ZNF497|162968|zinc finger protein 497##AK289417|A1BG|1|alpha-1-B glycoprotein##AF414429|A1BG|1|alpha-1-B glycoprotein##AK055885|A1BG|1|alpha-1-B glycoprotein##AB073611|A1BG|1|alpha-1-B glycoprotein##NM_130786|A1BG|1|alpha-1-B glycoprotein##BX537419|A1BG|1|alpha-1-B glycoprotein##AK056201|A1BG|1|alpha-1-B glycoprotein##BC029960|ZNF837|116412|zinc finger protein 837##NM_001129730|ZNF837|116412|zinc finger protein 837##NM_138466|ZNF837|116412|zinc finger protein 837##AK223106|RPS5|6193|ribosomal protein S5##AK311938|RPS5|6193|ribosomal protein S5##D28455|RPS5|6193|ribosomal protein S5##NM_001009|RPS5|6193|ribosomal protein S5##BC015405|RPS5|6193|ribosomal protein S5##BC018828|RPS5|6193|ribosomal protein S5##BC018151|RPS5|6193|ribosomal protein S5##BC035830|RPS5|6193|ribosomal protein S5##U14970|RPS5|6193|ribosomal protein S5##NM_001195135|LOC646862|646862|uncharacterized LOC646862	0.724701	CTCF.p2:-15:0.725
chr20	46045558	46045707	reg1025042.p2	4.815	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-60144	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-68985	-	TSC_hg19_v1_chr20_-_45927496 BC030721	-118063	-	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	84990	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	85052	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	369120	-	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2	0.0	
chr5	31232520	31232615	reg1028551.p1	4.815	+	TSC_hg19_v1_chr5_+_31193875 BC000019 AK024238	-38690	+	NM_004932 TSC_hg19_v1_chr5_+_31193792 AK291290	-38771	+	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	-3760164	+	TSC_hg19_v1_chr5_-_31532201 AK308093 AF189011 BC054003 BX647724 NM_001100412 NM_013235	299655	-	NM_018356 TSC_hg19_v1_chr5_+_31532398 BC032845 AK299156 AK002055 BC021215 AB527598	299868	+	TSC_hg19_v1_chr5_+_31639424 AB002298	406903	+	BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401##AK308093|DROSHA|29102|drosha, ribonuclease type III##AF189011|DROSHA|29102|drosha, ribonuclease type III##BC054003|DROSHA|29102|drosha, ribonuclease type III##BX647724|DROSHA|29102|drosha, ribonuclease type III##NM_001100412|DROSHA|29102|drosha, ribonuclease type III##NM_013235|DROSHA|29102|drosha, ribonuclease type III##NM_018356|C5orf22|55322|chromosome 5 open reading frame 22##BC032845|C5orf22|55322|chromosome 5 open reading frame 22##AK299156|C5orf22|55322|chromosome 5 open reading frame 22##AK002055|C5orf22|55322|chromosome 5 open reading frame 22##BC021215|C5orf22|55322|chromosome 5 open reading frame 22##AB002298|PDZD2|23037|PDZ domain containing 2	0.658847	CTCF.p2:17:0.659
chr5	392693	392873	reg1028998.p1	4.815	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-88493	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-120978	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-121015	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	50447	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	50567	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	80329	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.0	
chr1	203745920	203746032	reg1029799.p2	4.814	+	NM_001136190 NM_017773 AK301076 TSC_hg19_v1_chr1_+_203734310 AK301421 BC089408 AY090784	-11645	+	TSC_hg19_v1_chr1_+_203596243 BC140774	-149744	+	TSC_hg19_v1_chr1_+_203595959 CR936708 CR749393	-150017	+	NM_014827 TSC_hg19_v1_chr1_+_203764762 CR627439 AK095858	18798	+	TSC_hg19_v1_chr1_+_203764804 AK296983	18828	+	TSC_hg19_v1_chr1_+_203764830 BC014268 BC038513	18852	+	NM_001136190|LAX1|54900|lymphocyte transmembrane adaptor 1##NM_017773|LAX1|54900|lymphocyte transmembrane adaptor 1##AK301076|LAX1|54900|lymphocyte transmembrane adaptor 1##AK301421|LAX1|54900|lymphocyte transmembrane adaptor 1##BC089408|LAX1|54900|lymphocyte transmembrane adaptor 1##AY090784|LAX1|54900|lymphocyte transmembrane adaptor 1##BC140774|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR936708|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR749393|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_014827|ZC3H11A|9877|zinc finger CCCH-type containing 11A##CR627439|ZC3H11A|9877|zinc finger CCCH-type containing 11A##AK095858|ZC3H11A|9877|zinc finger CCCH-type containing 11A##AK296983|ZC3H11A|9877|zinc finger CCCH-type containing 11A##BC014268|ZC3H11A|9877|zinc finger CCCH-type containing 11A##BC038513|ZC3H11A|9877|zinc finger CCCH-type containing 11A	0.064752	
chr12	92839210	92839351	reg1029011.p1	4.814	+	AJ845168 NM_001025232	-17357	-	AJ845165 AJ845166 NM_001025233	-21546	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-299637	-	NM_001037671 NM_001178097	257338	+	NM_001004330 AK128530	291007	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	483658	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr15	61224943	61225055	reg1027732.p2	4.814	+	U04899 U04898 NM_002943 NM_134260	-305314	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	-340320	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-453725	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	296425	-	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	296498	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	1127615	-	U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	0.0	
chr16	84548467	84548648	reg1029657.p1	4.814	+	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	-10266	-	TSC_hg19_v1_chr16_+_84402143 AK300526 AY791884 BX648333 NM_014861 AK316128 CR749829	-146415	+	AF302109 NM_021197 AF169631 TSC_hg19_v1_chr16_+_84328440 AK075061 BC029159 DQ893365 DQ896682	-220069	+	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	103019	-	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	103103	-	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	133577	+	BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##AK300526|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AY791884|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BX648333|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##NM_014861|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AK316128|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##CR749829|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AF302109|WFDC1|58189|WAP four-disulfide core domain 1##NM_021197|WFDC1|58189|WAP four-disulfide core domain 1##AF169631|WFDC1|58189|WAP four-disulfide core domain 1##AK075061|WFDC1|58189|WAP four-disulfide core domain 1##BC029159|WFDC1|58189|WAP four-disulfide core domain 1##DQ893365|WFDC1|58189|WAP four-disulfide core domain 1##DQ896682|WFDC1|58189|WAP four-disulfide core domain 1##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)	0.0	
chr18	22124159	22124295	reg1033819.p1	4.814	+	AF312230 BC069136 NM_001143828 NM_001160166 NM_021624 AB045370 BC112348 AB044934 AF307973 AF325356 AF329449 AJ298292 AY008280 AY136745 DQ835186 DQ835187	-83585	+	TSC_hg19_v1_chr18_+_22006671 AK312727 BC034016 AB026264 AB587563 CU689806 DQ893141 EU176771 AF208694	-117562	+	TSC_hg19_v1_chr18_+_22006608 AK292533 NM_018439 BC036074	-117620	+	TSC_hg19_v1_chr18_-_22931121 AB385259	806921	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	807810	-	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	807936	-	AF312230|HRH4|59340|histamine receptor H4##BC069136|HRH4|59340|histamine receptor H4##NM_001143828|HRH4|59340|histamine receptor H4##NM_001160166|HRH4|59340|histamine receptor H4##NM_021624|HRH4|59340|histamine receptor H4##AB045370|HRH4|59340|histamine receptor H4##BC112348|HRH4|59340|histamine receptor H4##AB044934|HRH4|59340|histamine receptor H4##AF307973|HRH4|59340|histamine receptor H4##AF325356|HRH4|59340|histamine receptor H4##AF329449|HRH4|59340|histamine receptor H4##AJ298292|HRH4|59340|histamine receptor H4##AY008280|HRH4|59340|histamine receptor H4##AY136745|HRH4|59340|histamine receptor H4##DQ835186|HRH4|59340|histamine receptor H4##DQ835187|HRH4|59340|histamine receptor H4##AK312727|IMPACT|55364|Impact homolog (mouse)##BC034016|IMPACT|55364|Impact homolog (mouse)##AB026264|IMPACT|55364|Impact homolog (mouse)##DQ893141|IMPACT|55364|Impact homolog (mouse)##EU176771|IMPACT|55364|Impact homolog (mouse)##AF208694|IMPACT|55364|Impact homolog (mouse)##AK292533|IMPACT|55364|Impact homolog (mouse)##NM_018439|IMPACT|55364|Impact homolog (mouse)##BC036074|IMPACT|55364|Impact homolog (mouse)##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521	0.743307	CTCF.p2:-14:0.743
chr19	59030393	59030574	reg1015479.p1	4.814	+	AB527212 TSC_hg19_v1_chr19_-_59023360 AK298446 AK123036 NM_012254	-7106	-	AY280800 TSC_hg19_v1_chr19_+_58987792 AK000633 AY279351 NM_017908 BC017206 AK026153	-42700	+	AK092341 TSC_hg19_v1_chr19_+_58978664	-51816	+	BC024738 NM_032792 TSC_hg19_v1_chr19_-_59030968	470	-	TSC_hg19_v1_chr19_-_59031178 AK130056 AK027392	705	-	TSC_hg19_v1_chr19_+_59055826 AK225760 BC004978 NM_005762 BC052986	25349	+	AK298446|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##AK123036|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##NM_012254|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##AY280800|ZNF446|55663|zinc finger protein 446##AK000633|ZNF446|55663|zinc finger protein 446##AY279351|ZNF446|55663|zinc finger protein 446##NM_017908|ZNF446|55663|zinc finger protein 446##BC017206|ZNF446|55663|zinc finger protein 446##AK026153|ZNF446|55663|zinc finger protein 446##AK092341|ZNF324|25799|zinc finger protein 324##BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45##NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45##AK027392|ZBTB45|84878|zinc finger and BTB domain containing 45##AK225760|TRIM28|10155|tripartite motif containing 28##BC004978|TRIM28|10155|tripartite motif containing 28##NM_005762|TRIM28|10155|tripartite motif containing 28##BC052986|TRIM28|10155|tripartite motif containing 28	0.0	
chr20	53250560	53250697	reg1028560.p1	4.814	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-158414	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	-425991	+	TSC_hg19_v1_chr20_+_52824396 NM_002623	-426181	+	NM_080617	1329383	-	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	1573159	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	1683396	+	BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##NM_002623|PFDN4|5203|prefoldin subunit 4##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B	0.0	
chr21	45566979	45567126	reg1000757.p3	4.814	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-13491	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-13547	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-39753	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	93714	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	93805	-	AF194032 NM_013369 NM_175867	115046	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr10	103600083	103600190	reg1000289.p1	4.813	+	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	-524	-	TSC_hg19_v1_chr10_-_103578213 NM_001142434 NM_012215	-21918	-	TSC_hg19_v1_chr10_-_103578192 BC032591	-21950	-	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	3471	-	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	215776	-	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	225006	+	DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##NM_001142434|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##NM_012215|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC032591|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6	0.0	
chr11	69258100	69258188	reg1029845.p1	4.813	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	-196522	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-400618	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-441718	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	197712	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	197766	+	BC000076 BC001501 BC014078 TSC_hg19_v1_chr11_+_69455939 M73554 BC023620	197806	+	AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1##BC000076|CCND1|595|cyclin D1##BC001501|CCND1|595|cyclin D1##BC014078|CCND1|595|cyclin D1##M73554|CCND1|595|cyclin D1##BC023620|CCND1|595|cyclin D1	0.0	
chr12	119288185	119288281	reg1029548.p2	4.813	+	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	-473831	+	TSC_hg19_v1_chr12_-_118810713 NM_016281	-477503	-	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	-477605	-	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	131114	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	328446	+	BC040553 NM_178499	484283	+	BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_016281|TAOK3|51347|TAO kinase 3##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60	0.131153	
chr12	15724041	15724194	reg1028190.p1	4.813	+	TSC_hg19_v1_chr12_+_15699551 AK290982	-24540	+	NM_030668 NM_030669 NM_030670 NM_030671 AF152378 AF187042 AF187043 AF187044	-24836	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	-248566	+	TSC_hg19_v1_chr12_-_15815073 AK316134	91023	-	TSC_hg19_v1_chr12_-_15865848 AK292931	141747	-	TSC_hg19_v1_chr12_-_15942323 U12535 BC005836 AK291777 BC030010	218115	-	AK290982|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK316134|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK292931|EPS8|2059|epidermal growth factor receptor pathway substrate 8##U12535|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC005836|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK291777|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC030010|EPS8|2059|epidermal growth factor receptor pathway substrate 8	0.0	
chr10	77411401	77411513	reg1028856.p2	4.812	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-249892	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-249976	-	TSC_hg19_v1_chr10_-_77161142 CU680472 EU446545 BC013011 BC021165	-250247	-	AF267860 NM_032024	131061	+	AF118141 TSC_hg19_v1_chr10_-_79397246	1985768	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	1985879	-	AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##EU446545|ZNF503|84858|zinc finger protein 503##BC013011|ZNF503|84858|zinc finger protein 503##BC021165|ZNF503|84858|zinc finger protein 503##AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.063591	
chr11	15873857	15873990	reg1034213.p1	4.812	+	AB236158 NM_001042536	-737440	+	AB236159 NM_001031853	-739954	+	BC008428 AK291188 BC092468 NM_000728	-778797	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	550478	-	BC037866 NM_001145811	556504	-	AF309034 NM_033326	624002	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	0.981588	CTCF.p2:12:0.982
chr1	203053772	203053882	reg1028131.p1	4.812	+	AK126624 NM_015053 BC132923 BC132925 BC144262	-33489	+	TSC_hg19_v1_chr1_+_202976528 BC013073 NM_138391 NM_001079809 BC150647 CU680486 CU688332	-77268	+	AF070537 TSC_hg19_v1_chr1_+_202976519 AK291426 AK312985 AK309745 BC067775	-77308	+	BT007233 CU691060 AB463908 EU831793 EU831870 TSC_hg19_v1_chr1_-_203055140 X17651 BC053899	1299	-	NM_002479	1549	-	AK289928 NM_000674 NM_001048230 AK095060 BC026340	43020	+	AK126624|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##NM_015053|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##BC132923|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##BC132925|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##BC144262|PPFIA4|8497|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4##BC013073|TMEM183A|92703|transmembrane protein 183A##NM_138391|TMEM183A|92703|transmembrane protein 183A##NM_001079809|TMEM183B|653659|transmembrane protein 183B##BC150647|TMEM183A|92703|transmembrane protein 183A##AF070537|TMEM183A|92703|transmembrane protein 183A##AK291426|TMEM183A|92703|transmembrane protein 183A##AK312985|TMEM183A|92703|transmembrane protein 183A##AK309745|TMEM183A|92703|transmembrane protein 183A##BC067775|TMEM183A|92703|transmembrane protein 183A##BT007233|MYOG|4656|myogenin (myogenic factor 4)##EU831793|MYOG|4656|myogenin (myogenic factor 4)##EU831870|MYOG|4656|myogenin (myogenic factor 4)##X17651|MYOG|4656|myogenin (myogenic factor 4)##BC053899|MYOG|4656|myogenin (myogenic factor 4)##NM_002479|MYOG|4656|myogenin (myogenic factor 4)##AK289928|ADORA1|134|adenosine A1 receptor##NM_000674|ADORA1|134|adenosine A1 receptor##NM_001048230|ADORA1|134|adenosine A1 receptor##AK095060|ADORA1|134|adenosine A1 receptor##BC026340|ADORA1|134|adenosine A1 receptor	0.307042	CTCF.p2:-3:0.307
chr22	50317119	50317271	reg1028800.p2	4.812	+	TSC_hg19_v1_chr22_+_50312337 BC050675 DQ470678 AK225930 AY358355 BC002894 DQ470676 DQ470677 DQ470680 AJ968414	-4820	+	TSC_hg19_v1_chr22_+_50312328 DQ470679 NM_001135101 NM_024324 AK308692 AK308535	-4891	+	TSC_hg19_v1_chr22_-_50312107 NM_024105	-5088	-	TSC_hg19_v1_chr22_+_50354140 NM_001001852 AB114795	36954	+	TSC_hg19_v1_chr22_+_50354433 AK292005 BC141855 BC052239 AB528933 BC140030	37316	+	NM_001001694 AK123987	133875	-	BC050675|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470678|CRELD2|79174|cysteine-rich with EGF-like domains 2##AK225930|CRELD2|79174|cysteine-rich with EGF-like domains 2##AY358355|CRELD2|79174|cysteine-rich with EGF-like domains 2##BC002894|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470676|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470677|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470680|CRELD2|79174|cysteine-rich with EGF-like domains 2##AJ968414|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470679|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_001135101|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_024324|CRELD2|79174|cysteine-rich with EGF-like domains 2##AK308535|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_024105|ALG12|79087|asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae)##NM_001001852|PIM3|415116|pim-3 oncogene##AB114795|PIM3|415116|pim-3 oncogene##AK292005|PIM3|415116|pim-3 oncogene##BC141855|PIM3|415116|pim-3 oncogene##BC052239|PIM3|415116|pim-3 oncogene##BC140030|PIM3|415116|pim-3 oncogene##NM_001001694|IL17REL|400935|interleukin 17 receptor E-like##AK123987|IL17REL|400935|interleukin 17 receptor E-like	0.29433	CTCF.p2:0:0.294
chr3	17274784	17274928	reg1002322.p1	4.812	+	BC036392 NM_015184	-300275	+	AB029015 NM_001144382	-348405	+	U65918 U66726 U66078 BC027595 NM_001351	-627890	-	AK310539 NM_001134381	466655	-	D86965 NM_014744	507542	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	509311	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.0	
chr5	153712680	153712832	reg1029858.p1	4.812	+	TSC_hg19_v1_chr5_+_153570292 BC050333 NM_198321 AK127135 AB078145 AB527381 AJ505950 AK074132	-142398	+	TSC_hg19_v1_chr5_+_153418558 AK315573 BC026244	-294196	+	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	-294232	+	TSC_hg19_v1_chr5_-_153825380 BC042059 AK095428	112611	-	TSC_hg19_v1_chr5_+_153825535 AK021588 NM_001131062 NM_001131063 NM_024632	112763	+	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	112854	+	BC050333|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##NM_198321|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK127135|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AB078145|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AJ505950|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK074132|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK315573|MFAP3|4238|microfibrillar-associated protein 3##BC026244|MFAP3|4238|microfibrillar-associated protein 3##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3##BC042059|FLJ38109|386627|uncharacterized LOC386627##AK095428|FLJ38109|386627|uncharacterized LOC386627##AK021588|SAP30L|79685|SAP30-like##NM_001131062|SAP30L|79685|SAP30-like##NM_001131063|SAP30L|79685|SAP30-like##NM_024632|SAP30L|79685|SAP30-like##AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like	0.332783	CTCF.p2:-39:0.333
chr9	4386951	4387054	reg1027248.p2	4.812	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-86971	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-87039	-	TSC_hg19_v1_chr9_-_4299574 DQ438882 DQ438887 DQ438892 DQ438899 DQ438902	-87419	-	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	103435	+	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	275309	+	AK295831 NM_001039395	279667	-	AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##DQ438882|GLIS3|169792|GLIS family zinc finger 3##DQ438887|GLIS3|169792|GLIS family zinc finger 3##DQ438892|GLIS3|169792|GLIS family zinc finger 3##DQ438899|GLIS3|169792|GLIS family zinc finger 3##DQ438902|GLIS3|169792|GLIS family zinc finger 3##NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68	0.0	
chrX	111611722	111611856	reg1026631.p1	4.812	+	AK128465 NM_001004308	-285537	+	AF054568 NM_012471	-285786	-	BC034811 NM_001195577	-486665	+	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	311550	-	AB384557 AY987378 NM_001113490	454564	-	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	472273	-	AK128465|ZCCHC16|340595|zinc finger, CCHC domain containing 16##NM_001004308|ZCCHC16|340595|zinc finger, CCHC domain containing 16##AF054568|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##NM_012471|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##BC034811|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195577|LOC100329135|100329135|uncharacterized LOC100329135##BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin	0.986903	CTCF.p2:23:0.987
chr1	119819332	119819413	reg1026698.p1	4.811	+	TSC_hg19_v1_chr1_-_119683274 BC021722 CU692202 BC039889 AK223197 AJ242739 AK296799 BC044575 AK313740 AK300295 NM_015836 NM_201263	-136103	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	-136346	+	AK127536 NM_152380	-287194	-	TSC_hg19_v1_chr1_+_119911431 AK298289 NM_001005783 NM_016527 BC020863 AF231917 AF203975 AY513277	92072	+	NM_001166120	138181	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	138389	+	BC021722|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC039889|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK223197|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AJ242739|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK296799|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC044575|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK313740|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK300295|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_015836|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_201263|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15##AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)##BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2	0.897655	CTCF.p2:12:0.898
chr19	17220925	17221098	reg1030065.p2	4.811	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-34418	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-34690	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-83471	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	105161	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	105194	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	116023	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.0	
chr20	4721590	4721716	reg1030623.p2	4.811	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	-19119	+	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	-54677	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	-492063	-	AY154472 NM_170774	74115	-	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	82541	-	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	260507	-	AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	0.999664	CTCF.p2:-17:1.000
chr2	169193460	169193590	reg1030332.p1	4.811	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	-89452	-	NM_020981	-518344	+	EF119711 EF119717 NM_001199144 NM_001199145	-1149733	+	TSC_hg19_v1_chr2_+_169312764 AK172775	119234	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	119350	+	AK093444 AX748130 NM_001171631	449523	+	BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##AK172775|CERS6|253782|ceramide synthase 6##NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6##AK093444|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171631|NOSTRIN|115677|nitric oxide synthase trafficker	0.89484	CTCF.p2:-8:0.895
chr22	29563567	29563748	reg1020074.p2	4.811	+	TSC_hg19_v1_chr22_+_29469035 BC063787 NM_001039570 NM_032045 AK056425 AB059618	-94635	+	CR456405 BC074758 BC126262 BC126264 AL035364 NM_015370	-105808	-	TSC_hg19_v1_chr22_+_29449893 BC042614	-113732	+	TSC_hg19_v1_chr22_+_29601914 BC046358 NM_133455 CR456407 CU012965 CU013253 AB463024 AJ416090	38235	+	TSC_hg19_v1_chr22_-_29663824 AL050346 NM_012265	100211	-	NM_001163285 NM_001163286 NM_001163287 NM_005243 NM_013986 TSC_hg19_v1_chr22_+_29664088	100390	+	BC063787|KREMEN1|83999|kringle containing transmembrane protein 1##NM_001039570|KREMEN1|83999|kringle containing transmembrane protein 1##NM_032045|KREMEN1|83999|kringle containing transmembrane protein 1##AK056425|KREMEN1|83999|kringle containing transmembrane protein 1##AB059618|KREMEN1|83999|kringle containing transmembrane protein 1##CR456405|C22orf31|25770|chromosome 22 open reading frame 31##BC074758|C22orf31|25770|chromosome 22 open reading frame 31##BC126262|C22orf31|25770|chromosome 22 open reading frame 31##BC126264|C22orf31|25770|chromosome 22 open reading frame 31##AL035364|C22orf31|25770|chromosome 22 open reading frame 31##NM_015370|C22orf31|25770|chromosome 22 open reading frame 31##BC042614|ZNRF3|84133|zinc and ring finger 3##BC046358|EMID1|129080|EMI domain containing 1##NM_133455|EMID1|129080|EMI domain containing 1##CR456407|EMID1|129080|EMI domain containing 1##CU012965|EMID1|129080|EMI domain containing 1##CU013253|EMID1|129080|EMI domain containing 1##AJ416090|EMID1|129080|EMI domain containing 1##AL050346|RHBDD3|25807|rhomboid domain containing 3##NM_012265|RHBDD3|25807|rhomboid domain containing 3##NM_001163285|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163286|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163287|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_005243|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_013986|EWSR1|2130|Ewing sarcoma breakpoint region 1	0.0	
chr22	50838228	50838325	reg1028465.p1	4.811	+	AB014585 TSC_hg19_v1_chr22_+_50781776 BC041698 AK302472	-56473	+	TSC_hg19_v1_chr22_+_50781755 NM_001242898 NM_001242899 NM_001242900 NM_014678 BC032664 BC006568 BC052995	-56533	+	AK054743 AK022407 BC031069 NM_001001794	-72830	-	BC046169 TSC_hg19_v1_chr22_-_50893787 BC056915	55490	-	EU831421 EU831514 BC111424 BC087612 TSC_hg19_v1_chr22_-_50913465 BC040031 AK057985 NM_002972	75112	-	TSC_hg19_v1_chr22_+_50919971 AK024788 AK225097 NM_024866 AB236970 NM_001253845 AK090635 AB463404 AB121034 AF529213	81847	+	AB014585|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC041698|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##AK302472|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242898|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242899|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242900|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_014678|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC032664|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC006568|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC052995|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##AK054743|FAM116B|414918|family with sequence similarity 116, member B##BC031069|FAM116B|414918|family with sequence similarity 116, member B##NM_001001794|FAM116B|414918|family with sequence similarity 116, member B##BC046169|SBF1|6305|SET binding factor 1##BC056915|SBF1|6305|SET binding factor 1##EU831421|SBF1|6305|SET binding factor 1##EU831514|SBF1|6305|SET binding factor 1##BC087612|SBF1|6305|SET binding factor 1##BC040031|SBF1|6305|SET binding factor 1##AK057985|SBF1|6305|SET binding factor 1##NM_002972|SBF1|6305|SET binding factor 1##AK024788|ADM2|79924|adrenomedullin 2##NM_024866|ADM2|79924|adrenomedullin 2##AB236970|ADM2|79924|adrenomedullin 2##NM_001253845|ADM2|79924|adrenomedullin 2##AK090635|ADM2|79924|adrenomedullin 2##AB121034|ADM2|79924|adrenomedullin 2##AF529213|ADM2|79924|adrenomedullin 2	0.909645	CTCF.p2:-1:0.910
chr4	107122638	107122737	reg1024929.p1	4.811	+	TSC_hg19_v1_chr4_+_106816634 AK290029 AK304721 AL832465 BC131587	-305997	+	TSC_hg19_v1_chr4_+_106816593 AK295772 NM_001033047 NM_001184690 NM_001184691 NM_001184692 NM_001184693 AK302477 AK304279 AY358336	-306086	+	AK292355 BC032942 NM_001031720	-490720	+	NM_001142415 AK297950 AK095951 NM_004757	114122	+	TSC_hg19_v1_chr4_-_107237383 BC068496 AK315571 BX647851 BC009208 NM_001163435 NM_001163437 NM_033115	114698	-	AK303965 NM_001142416 TSC_hg19_v1_chr4_+_107237695	114992	+	AK290029|NPNT|255743|nephronectin##AK304721|NPNT|255743|nephronectin##AL832465|NPNT|255743|nephronectin##BC131587|NPNT|255743|nephronectin##AK295772|NPNT|255743|nephronectin##NM_001033047|NPNT|255743|nephronectin##NM_001184690|NPNT|255743|nephronectin##NM_001184691|NPNT|255743|nephronectin##NM_001184692|NPNT|255743|nephronectin##NM_001184693|NPNT|255743|nephronectin##AK302477|NPNT|255743|nephronectin##AK304279|NPNT|255743|nephronectin##AY358336|NPNT|255743|nephronectin##AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001142415|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##AK297950|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##AK095951|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_004757|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##BC068496|TBCK|93627|TBC1 domain containing kinase##AK315571|TBCK|93627|TBC1 domain containing kinase##BX647851|TBCK|93627|TBC1 domain containing kinase##BC009208|TBCK|93627|TBC1 domain containing kinase##NM_001163435|TBCK|93627|TBC1 domain containing kinase##NM_001163437|TBCK|93627|TBC1 domain containing kinase##NM_033115|TBCK|93627|TBC1 domain containing kinase##AK303965|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_001142416|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	0.0	
chr5	21810971	21811071	reg1028407.p1	4.811	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	-351373	+	TSC_hg19_v1_chr5_+_21459621 AK290693	-351412	+	AK295087 BC031051 NM_001167667 NM_004934	-1822699	-	TSC_hg19_v1_chr5_-_22212879 AK314800	401860	-	BC047608 TSC_hg19_v1_chr5_-_22853454	1042425	-	L33477 NM_004061	1042709	-	BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	0.572239	CTCF.p2:-14:0.572
chr8	17772471	17772576	reg1029234.p1	4.811	+	TSC_hg19_v1_chr8_-_17767878 BC073919	-4643	-	AF042354 AF168954 NM_147203 NM_201553 AX772838 TSC_hg19_v1_chr8_-_17753015 D14446 AK225619 AK289448 AK225616 BC007047 NM_004467 NM_201552	-19577	-	BT006635 CU675515 D87342 TSC_hg19_v1_chr8_-_17743179	-29403	-	TSC_hg19_v1_chr8_+_17780369 L27841 NM_006197	7873	+	TSC_hg19_v1_chr8_+_17780498 AK307583 BC098391	7972	+	TSC_hg19_v1_chr8_+_17780501 BC000453	7982	+	AF042354|FGL1|2267|fibrinogen-like 1##AF168954|FGL1|2267|fibrinogen-like 1##NM_147203|FGL1|2267|fibrinogen-like 1##NM_201553|FGL1|2267|fibrinogen-like 1##AX772838|FGL1|2267|fibrinogen-like 1##D14446|FGL1|2267|fibrinogen-like 1##AK225619|FGL1|2267|fibrinogen-like 1##AK289448|FGL1|2267|fibrinogen-like 1##AK225616|FGL1|2267|fibrinogen-like 1##BC007047|FGL1|2267|fibrinogen-like 1##NM_004467|FGL1|2267|fibrinogen-like 1##NM_201552|FGL1|2267|fibrinogen-like 1##BT006635|FGL1|2267|fibrinogen-like 1##D87342|FGL1|2267|fibrinogen-like 1##L27841|PCM1|5108|pericentriolar material 1##NM_006197|PCM1|5108|pericentriolar material 1##AK307583|PCM1|5108|pericentriolar material 1##BC000453|PCM1|5108|pericentriolar material 1	0.497132	CTCF.p2:-13:0.497
chr11	111647941	111648122	reg1003936.p1	4.810	+	AB384965 DQ890606 DQ894107 EU176538 AK292275 AK293388 AK294716 TSC_hg19_v1_chr11_-_111637114 BC027596 AK296455 AK301705 AF087438 AF163473 NM_001177562 NM_001177563 NM_002716 NM_181699 NM_181700	-10905	-	M65254 TSC_hg19_v1_chr11_-_111637059	-11001	-	TSC_hg19_v1_chr11_+_111473176 NM_015191 AK291233 AL136764 AB018324 AB096248 AK000396 BC113459 BC117183 AB084424	-174798	+	TSC_hg19_v1_chr11_-_111742001 NM_001077691 NM_001077692	93987	-	TSC_hg19_v1_chr11_-_111742285 DQ892761 DQ896006 AM393011 AM393178 AB527104 CU679277 AL136927 BC009255 AF395532 AK308025 AK225261 AK298811 AK025498 NM_001077690 NM_024740	94224	-	AK300795 BC006136 TSC_hg19_v1_chr11_-_111749888 BC127680	101827	-	DQ890606|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##DQ894107|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##EU176538|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK292275|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK293388|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK294716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##BC027596|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK296455|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AK301705|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF087438|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##AF163473|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177562|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_001177563|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_002716|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181699|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_181700|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##M65254|PPP2R1B|5519|protein phosphatase 2, regulatory subunit A, beta##NM_015191|SIK2|23235|salt-inducible kinase 2##AK291233|SIK2|23235|salt-inducible kinase 2##AL136764|SIK2|23235|salt-inducible kinase 2##AB018324|SIK2|23235|salt-inducible kinase 2##AB096248|SIK2|23235|salt-inducible kinase 2##AK000396|SIK2|23235|salt-inducible kinase 2##BC113459|SIK2|23235|salt-inducible kinase 2##BC117183|SIK2|23235|salt-inducible kinase 2##AB084424|SIK2|23235|salt-inducible kinase 2##NM_001077691|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_001077692|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##DQ892761|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##DQ896006|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AM393011|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AM393178|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AL136927|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##BC009255|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AF395532|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK308025|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK225261|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK298811|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK025498|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_001077690|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##NM_024740|ALG9|79796|asparagine-linked glycosylation 9, alpha-1,2-mannosyltransferase homolog (S. cerevisiae)##AK300795|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1##BC006136|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1##BC127680|FDXACB1|91893|ferredoxin-fold anticodon binding domain containing 1	0.0	
chr2	70141638	70141783	reg1031142.p2	4.810	+	NM_006857 TSC_hg19_v1_chr2_+_70121093 BC017890 X76302 AK291128 AK312041 CU676102	-20611	+	TSC_hg19_v1_chr2_+_70056924 AB527982 EU832645 EU832722 CU675651	-84739	+	AK024042 TSC_hg19_v1_chr2_+_70056791 BC007420 NM_178439 AK023119	-84903	+	TSC_hg19_v1_chr2_+_70142202 NM_001202513 NM_001202514 NM_002357 BC098396	483	+	TSC_hg19_v1_chr2_+_70142240 AK301088 AK312734	540	+	TSC_hg19_v1_chr2_+_70142307 L06895 BC113531 BC117260 BC143831 BC143832 BC144601 BC069377 BC069433 AB463858 CR536495 CR541692 CU686788 HQ258749	672	+	NM_006857|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##BC017890|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##X76302|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##AK291128|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##AK312041|SNRNP27|11017|small nuclear ribonucleoprotein 27kDa (U4/U6.U5)##EU832645|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##EU832722|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##AK024042|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##BC007420|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##NM_178439|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##AK023119|GMCL1|64395|germ cell-less homolog 1 (Drosophila)##NM_001202513|MXD1|4084|MAX dimerization protein 1##NM_001202514|MXD1|4084|MAX dimerization protein 1##NM_002357|MXD1|4084|MAX dimerization protein 1##BC098396|MXD1|4084|MAX dimerization protein 1##AK301088|MXD1|4084|MAX dimerization protein 1##AK312734|MXD1|4084|MAX dimerization protein 1##L06895|MXD1|4084|MAX dimerization protein 1##BC113531|MXD1|4084|MAX dimerization protein 1##BC117260|MXD1|4084|MAX dimerization protein 1##BC143831|MXD1|4084|MAX dimerization protein 1##BC143832|MXD1|4084|MAX dimerization protein 1##BC144601|MXD1|4084|MAX dimerization protein 1##BC069377|MXD1|4084|MAX dimerization protein 1##BC069433|MXD1|4084|MAX dimerization protein 1##CR536495|MXD1|4084|MAX dimerization protein 1##CR541692|MXD1|4084|MAX dimerization protein 1##HQ258749|MXD1|4084|MAX dimerization protein 1	0.0	
chr5	169407461	169407556	reg1012489.p1	4.810	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-343208	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-343264	+	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	-396787	+	AK055998 NM_001129891	235	-	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	125463	+	BC030767 NM_001102609 BC092511	252488	+	D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58	0.011575	
chr7	20212488	20212610	reg1027201.p1	4.810	+	BX648384 NM_152774	-400146	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	-463903	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	-1027536	-	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	44431	-	AK295044 TSC_hg19_v1_chr7_+_20370337	157788	+	BC002630 NM_002214 M73780	158185	+	BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##AK295044|ITGB8|3696|integrin, beta 8##BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8	0.483392	CTCF.p2:9:0.483
chr10	76771665	76771762	reg1025721.p3	4.809	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-185359	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-835126	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-835183	+	AY686755 NM_001003892 BC137321 BC137322	46592	-	AB027004 AB103375 NM_016364	87534	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	97201	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr1	226925614	226925778	reg1026124.p3	4.809	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-189079	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-189195	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-329893	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	1242	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	132584	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	202250	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.0	
chr17	46293042	46293205	reg1030929.p1	4.809	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-107971	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-108138	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-114302	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	214415	-	TSC_hg19_v1_chr17_-_46507604 BC039040	214494	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	315148	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.0	
chr19	35892588	35892725	reg1028088.p2	4.809	+	AK290710 NM_005304 BC035657	-43162	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	-50206	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	-72565	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	47961	+	AM392574 AM392667 AM392672 AM392738 AM392847 AM392851 AM393397 AM393477 AY359007 HQ258707 BC130501 NM_001244847 NM_207392	88732	-	AY622964 AY789707 AF086315 AL832080 NM_001035516	100149	-	AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule##AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2##AM392574|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392667|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392672|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392738|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392847|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392851|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393397|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393477|KRTDAP|388533|keratinocyte differentiation-associated protein##AY359007|KRTDAP|388533|keratinocyte differentiation-associated protein##HQ258707|KRTDAP|388533|keratinocyte differentiation-associated protein##BC130501|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_001244847|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_207392|KRTDAP|388533|keratinocyte differentiation-associated protein##AY622964|DMKN|93099|dermokine##AY789707|DMKN|93099|dermokine##AF086315|DMKN|93099|dermokine##AL832080|DMKN|93099|dermokine##NM_001035516|DMKN|93099|dermokine	0.0	
chr2	138646583	138646704	reg1025587.p2	4.809	+	NM_001080427	-898182	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-1123527	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-1770967	-	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	75291	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	612750	+	TSC_hg19_v1_chr2_+_139259500 AK021919	612847	+	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like	0.993815	CTCF.p2:-4:0.994
chr3	196359503	196359580	reg1030737.p2	4.809	+	TSC_hg19_v1_chr3_+_196295733 NM_001105573	-63809	+	AK025697 TSC_hg19_v1_chr3_+_196295533	-64034	+	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	-64151	-	TSC_hg19_v1_chr3_+_196366647 BC034704	7104	+	BC044233 NM_198565 TSC_hg19_v1_chr3_+_196366658 AY358322	7121	+	AK058155 TSC_hg19_v1_chr3_-_196439156 BC007827 AY099509 NM_032898 AK314070	79575	-	NM_001105573|FBXO45|200933|F-box protein 45##AK025697|FBXO45|200933|F-box protein 45##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53##BC034704|LRRC33|375387|leucine rich repeat containing 33##BC044233|LRRC33|375387|leucine rich repeat containing 33##NM_198565|LRRC33|375387|leucine rich repeat containing 33##AY358322|LRRC33|375387|leucine rich repeat containing 33##AK058155|CEP19|84984|centrosomal protein 19kDa##BC007827|CEP19|84984|centrosomal protein 19kDa##AY099509|CEP19|84984|centrosomal protein 19kDa##NM_032898|CEP19|84984|centrosomal protein 19kDa##AK314070|CEP19|84984|centrosomal protein 19kDa	0.544525	CTCF.p2:41:0.545
chr4	26177171	26177351	reg1029457.p2	4.809	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-261397	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-312707	-	NM_001177999 AK314514	-519171	+	L07875 BC020780 NM_005349 NM_203283	144058	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	145048	+	TSC_hg19_v1_chr4_+_26322635 AK302230	145375	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.0	
chr15	41786370	41786494	reg1027557.p3	4.808	+	NM_002220 TSC_hg19_v1_chr15_+_41786071 BC026331 X54938 AB463780	-342	+	TSC_hg19_v1_chr15_+_41709329 NM_015138 AK292302 D87440 BC015052 AB383821	-77072	+	AF151823 BC000780 NM_016013 AK310033 AK310983 AK309889 TSC_hg19_v1_chr15_-_41694659	-91770	-	BC143903 D16105 AK314006 BC045607 X60702 AK296892 NM_001135685 NM_002344 NM_206961	19606	-	AB037824 TSC_hg19_v1_chr15_-_41836456 AK290224 BC000246	50017	-	TSC_hg19_v1_chr15_-_41836465 AK022794 NM_015540 AK308884	50032	-	NM_002220|ITPKA|3706|inositol-trisphosphate 3-kinase A##BC026331|ITPKA|3706|inositol-trisphosphate 3-kinase A##X54938|ITPKA|3706|inositol-trisphosphate 3-kinase A##NM_015138|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK292302|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##D87440|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC015052|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF151823|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##BC000780|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##NM_016013|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK310033|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK310983|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK309889|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##BC143903|LTK|4058|leukocyte receptor tyrosine kinase##D16105|LTK|4058|leukocyte receptor tyrosine kinase##AK314006|LTK|4058|leukocyte receptor tyrosine kinase##BC045607|LTK|4058|leukocyte receptor tyrosine kinase##X60702|LTK|4058|leukocyte receptor tyrosine kinase##AK296892|LTK|4058|leukocyte receptor tyrosine kinase##NM_001135685|LTK|4058|leukocyte receptor tyrosine kinase##NM_002344|LTK|4058|leukocyte receptor tyrosine kinase##NM_206961|LTK|4058|leukocyte receptor tyrosine kinase##AB037824|RPAP1|26015|RNA polymerase II associated protein 1##AK290224|RPAP1|26015|RNA polymerase II associated protein 1##BC000246|RPAP1|26015|RNA polymerase II associated protein 1##AK022794|RPAP1|26015|RNA polymerase II associated protein 1##NM_015540|RPAP1|26015|RNA polymerase II associated protein 1##AK308884|RPAP1|26015|RNA polymerase II associated protein 1	0.0	
chr15	80271424	80271604	reg1024558.p2	4.808	+	AB464467 BT007103 CR541937 CR541962 DQ891109 DQ894290 AY234180 U27467 AL110097 BC016281 AK304026 TSC_hg19_v1_chr15_-_80263526 U29680 Y09397 NM_001114735 NM_004049	-7963	-	TSC_hg19_v1_chr15_-_80216042 AF249277	-55476	-	NM_001100880 NM_001199757	-55851	-	NM_001242911 NM_001242912 NM_001242917 NM_001242918 NM_019006 TSC_hg19_v1_chr15_+_80351970 AF061739	80428	+	TSC_hg19_v1_chr15_+_80352031 BC005283 AK312646	80515	+	TSC_hg19_v1_chr15_+_80352046 AL136598	80553	+	BT007103|BCL2A1|597|BCL2-related protein A1##CR541937|BCL2A1|597|BCL2-related protein A1##CR541962|BCL2A1|597|BCL2-related protein A1##DQ891109|BCL2A1|597|BCL2-related protein A1##DQ894290|BCL2A1|597|BCL2-related protein A1##AY234180|BCL2A1|597|BCL2-related protein A1##U27467|BCL2A1|597|BCL2-related protein A1##AL110097|BCL2A1|597|BCL2-related protein A1##BC016281|BCL2A1|597|BCL2-related protein A1##U29680|BCL2A1|597|BCL2-related protein A1##Y09397|BCL2A1|597|BCL2-related protein A1##NM_001114735|BCL2A1|597|BCL2-related protein A1##NM_004049|BCL2A1|597|BCL2-related protein A1##AF249277|ST20|400410|suppressor of tumorigenicity 20##NM_001100880|ST20|400410|suppressor of tumorigenicity 20##NM_001199757|ST20|400410|suppressor of tumorigenicity 20##NM_001242911|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242912|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242917|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242918|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_019006|ZFAND6|54469|zinc finger, AN1-type domain 6##AF061739|ZFAND6|54469|zinc finger, AN1-type domain 6##BC005283|ZFAND6|54469|zinc finger, AN1-type domain 6##AK312646|ZFAND6|54469|zinc finger, AN1-type domain 6##AL136598|ZFAND6|54469|zinc finger, AN1-type domain 6	0.0	
chr17	34296912	34297092	reg1002236.p2	4.808	+	BC054481 NM_001199951	-26316	-	CU691088 AY742214 AY359018 NM_020426	-30543	-	AB528914 EF488474 EF488475 EF488476 EF488477 EF488478 BC032114 AK302782 AB080728 TSC_hg19_v1_chr17_-_34257778 BC127190 BC038301 NM_001034836 NM_001163120 NM_001163121 NM_145654	-39244	-	AB527929 U91746 AF055467 BC096352 BC099662 BC099663 BC099664 AF039955 NM_004590 AB007454 AK309593	11491	-	AB527896 HQ257907 BC038289 BC050647 Z49270 BC045165 NM_032962 NM_032963 TSC_hg19_v1_chr17_-_34313766 AX772826	16737	-	AB463484 AF031587 Z70292 Z70293 TSC_hg19_v1_chr17_-_34328592 U58914	31559	-	BC054481|LYZL6|57151|lysozyme-like 6##NM_001199951|LYZL6|57151|lysozyme-like 6##AY742214|LYZL6|57151|lysozyme-like 6##AY359018|LYZL6|57151|lysozyme-like 6##NM_020426|LYZL6|57151|lysozyme-like 6##EF488474|RDM1|201299|RAD52 motif 1##EF488475|RDM1|201299|RAD52 motif 1##EF488476|RDM1|201299|RAD52 motif 1##EF488477|RDM1|201299|RAD52 motif 1##EF488478|RDM1|201299|RAD52 motif 1##BC032114|RDM1|201299|RAD52 motif 1##AK302782|RDM1|201299|RAD52 motif 1##AB080728|RDM1|201299|RAD52 motif 1##BC127190|RDM1|201299|RAD52 motif 1##BC038301|RDM1|201299|RAD52 motif 1##NM_001034836|RDM1|201299|RAD52 motif 1##NM_001163120|RDM1|201299|RAD52 motif 1##NM_001163121|RDM1|201299|RAD52 motif 1##NM_145654|RDM1|201299|RAD52 motif 1##U91746|CCL16|6360|chemokine (C-C motif) ligand 16##AF055467|CCL16|6360|chemokine (C-C motif) ligand 16##BC096352|CCL16|6360|chemokine (C-C motif) ligand 16##BC099662|CCL16|6360|chemokine (C-C motif) ligand 16##BC099663|CCL16|6360|chemokine (C-C motif) ligand 16##BC099664|CCL16|6360|chemokine (C-C motif) ligand 16##AF039955|CCL16|6360|chemokine (C-C motif) ligand 16##NM_004590|CCL16|6360|chemokine (C-C motif) ligand 16##AB007454|CCL16|6360|chemokine (C-C motif) ligand 16##HQ257907|CCL14|6358|chemokine (C-C motif) ligand 14##BC038289|CCL14|6358|chemokine (C-C motif) ligand 14##BC050647|CCL14|6358|chemokine (C-C motif) ligand 14##Z49270|CCL14|6358|chemokine (C-C motif) ligand 14##BC045165|CCL14|6358|chemokine (C-C motif) ligand 14##NM_032962|CCL14|6358|chemokine (C-C motif) ligand 14##NM_032963|CCL14|6358|chemokine (C-C motif) ligand 14##AF031587|CCL15|6359|chemokine (C-C motif) ligand 15##Z70292|CCL14-CCL15|348249|CCL14-CCL15 readthrough##Z70293|CCL14-CCL15|348249|CCL14-CCL15 readthrough##U58914|CCL15|6359|chemokine (C-C motif) ligand 15	0.0	
chr2	43506643	43506777	reg1028905.p1	4.808	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-52968	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-52980	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-53365	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	316438	-	TSC_hg19_v1_chr2_+_43864411 BC063310	357703	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	357729	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.63245	CTCF.p2:-54:0.632
chr3	36885287	36885385	reg1025813.p1	4.808	+	NM_033403	-103985	-	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	-463284	+	BC017805 NM_198399 BC066651 BC036548	-1162877	+	TSC_hg19_v1_chr3_-_36986546 NM_014831	101234	-	AB385383 CU687938 TSC_hg19_v1_chr3_-_37034574	149235	-	TSC_hg19_v1_chr3_-_37034623 BC064696 AF059751 BC012624 AB018309 AY178832 NM_014805	149365	-	NM_033403|DCLK3|85443|doublecortin-like kinase 3##AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain##BC017805|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_198399|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC066651|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC036548|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1##BC064696|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AF059751|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##BC012624|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AB018309|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##AY178832|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1##NM_014805|EPM2AIP1|9852|EPM2A (laforin) interacting protein 1	0.883736	CTCF.p2:-4:0.884
chr3	13350079	13350255	reg1030565.p1	4.807	+	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	-235569	-	TSC_hg19_v1_chr3_-_13057189 BC071805	-292949	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	-341059	-	AB020713 TSC_hg19_v1_chr3_-_13384784	34598	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	111565	-	TSC_hg19_v1_chr3_-_13461832 BC020573 NM_024923	111650	-	AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##AB020713|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa##BC020573|NUP210|23225|nucleoporin 210kDa##NM_024923|NUP210|23225|nucleoporin 210kDa	0.0	
chr6	1524340	1524432	reg1028544.p2	4.807	+	NM_001452 U13220 AB463646	-134261	+	BC053850 NM_033260	-211712	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-831296	-	BC134421 NM_001453	86294	+	TSC_hg19_v1_chr6_+_1611545 BC169307	87188	+	AF040260 NM_001253846	651838	-	NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##BC169307|FOXC1|2296|forkhead box C1##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase	0.472455	CTCF.p2:-17:0.472
chr9	112891371	112891552	reg1027404.p2	4.807	+	NM_001136562 AK300427	-3669	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	-80498	+	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	-80552	+	NM_001012993	78951	-	AF065241 AF276919 CR407665 AF313911 AY004872 AF085844 BC003377 J04026 BC054866 TSC_hg19_v1_chr9_-_113018788 X77584	127291	-	TSC_hg19_v1_chr9_-_113018817 BX647247 D28376 AK289508	127364	-	NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001012993|C9orf152|401546|chromosome 9 open reading frame 152##AF065241|TXN|7295|thioredoxin##AF276919|TXN|7295|thioredoxin##CR407665|TXN|7295|thioredoxin##AF313911|TXN|7295|thioredoxin##AY004872|TXN|7295|thioredoxin##AF085844|TXN|7295|thioredoxin##BC003377|TXN|7295|thioredoxin##J04026|TXN|7295|thioredoxin##BC054866|TXN|7295|thioredoxin##X77584|TXN|7295|thioredoxin##BX647247|TXN|7295|thioredoxin##D28376|TXN|7295|thioredoxin##AK289508|TXN|7295|thioredoxin	0.0	
chrX	51199816	51199911	reg1028239.p2	4.807	+	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	-124160	+	AF469196 NM_153183	-124781	+	BC117264 BC117266 NM_005448 BC069155 HQ258214	-546105	+	AB528198 AM392606 AK001490 TSC_hg19_v1_chrX_-_51239368	39469	-	BC009942 TSC_hg19_v1_chrX_-_51239444 NM_018159	39579	-	TSC_hg19_v1_chrX_+_51486493 NM_018094 AK225671 BC036077 AK298868 AK023155 AK001303	286648	+	AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AM392606|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK001490|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##BC009942|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018159|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018094|GSPT2|23708|G1 to S phase transition 2##BC036077|GSPT2|23708|G1 to S phase transition 2##AK298868|GSPT2|23708|G1 to S phase transition 2##AK023155|GSPT2|23708|G1 to S phase transition 2##AK001303|GSPT2|23708|G1 to S phase transition 2	0.291464	CTCF.p2:15:0.291
chr10	6244888	6245004	reg1005599.p2	4.806	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-70	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-58034	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-58062	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	377315	-	TSC_hg19_v1_chr10_+_6622460 AY007155	377534	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	1206304	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.0	
chr11	63713553	63713675	reg1005917.p2	4.806	+	TSC_hg19_v1_chr11_+_63706473 NM_024771 AK023910 AK300451 AK303557 JF263566 BC041617 BC052298	-7130	+	TSC_hg19_v1_chr11_-_63684632 AB593132	-28975	-	BC023587 NM_173587	-29299	-	TSC_hg19_v1_chr11_+_63742069 BC063025 NM_004074 BC000501 AK311934 BT009803 CR407687	28469	+	AK098029 NM_017670	39710	+	TSC_hg19_v1_chr11_+_63753896 AK000120	40247	+	NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##JF263566|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AB593132|RCOR2|283248|REST corepressor 2##BC023587|RCOR2|283248|REST corepressor 2##NM_173587|RCOR2|283248|REST corepressor 2##BC063025|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##NM_004074|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##BC000501|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##AK311934|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##BT009803|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##CR407687|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##AK098029|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##NM_017670|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	0.017574	
chr15	101389854	101389948	reg1025805.p2	4.806	+	NM_024708 NM_198243 TSC_hg19_v1_chr15_+_101142810 AK289860 BC063581 AF451994 AK026204 AK222958 AK222974 BC025252	-247106	+	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	-247492	-	BC034500 BC034970 NM_178842	-305004	-	TSC_hg19_v1_chr15_+_101390032 AK056534	132	+	TSC_hg19_v1_chr15_+_101420006 NM_000693	30105	+	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	30170	+	NM_024708|ASB7|140460|ankyrin repeat and SOCS box containing 7##NM_198243|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK289860|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC063581|ASB7|140460|ankyrin repeat and SOCS box containing 7##AF451994|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK026204|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222958|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222974|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC025252|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK056534|LOC145757|145757|uncharacterized LOC145757##NM_000693|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3	0.953747	CTCF.p2:-3:0.954
chr20	44737100	44737242	reg1027309.p1	4.806	+	TSC_hg19_v1_chr20_-_44718581 NM_020967	-18560	-	TSC_hg19_v1_chr20_-_44718561 AF230533	-18618	-	TSC_hg19_v1_chr20_-_44718529 BC056872	-18647	-	TSC_hg19_v1_chr20_+_44746923 NM_001250 NM_152854 BC064518 BC012419 X60592	9745	+	TSC_hg19_v1_chr20_+_44746952 AK222896 AJ300189 AB209660 AB590222 AX781593 AY225405 BT019901 DQ891804 DQ894988	9794	+	BC136526 NM_021248	143157	-	NM_020967|NCOA5|57727|nuclear receptor coactivator 5##AF230533|NCOA5|57727|nuclear receptor coactivator 5##BC056872|NCOA5|57727|nuclear receptor coactivator 5##NM_001250|CD40|958|CD40 molecule, TNF receptor superfamily member 5##NM_152854|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC064518|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC012419|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AK222896|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AJ300189|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AB209660|CD40|958|CD40 molecule, TNF receptor superfamily member 5##AY225405|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BT019901|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ891804|CD40|958|CD40 molecule, TNF receptor superfamily member 5##DQ894988|CD40|958|CD40 molecule, TNF receptor superfamily member 5##BC136526|CDH22|64405|cadherin 22, type 2##NM_021248|CDH22|64405|cadherin 22, type 2	0.152009	
chr20	56228507	56228587	reg1024837.p2	4.806	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	-33009	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	-92390	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	-128346	-	TSC_hg19_v1_chr20_-_56285017 AF305616 AX775889 NM_020182	56442	-	TSC_hg19_v1_chr20_+_56285236 AK056098	56678	+	TSC_hg19_v1_chr20_-_56285634 BC080635 AF224278 AY128643 NM_199169 NM_199170 AX775887 AK296199	57075	-	BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##BC080635|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AF224278|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AY128643|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199169|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199170|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK296199|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	0.773225	CTCF.p2:-19:0.773
chr22	35523121	35523219	reg1027795.p1	4.806	+	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	-61021	+	AJ007583 AB011181 NM_004737 NM_133642	-1206800	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-2068815	-	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	130306	+	AK293694 NM_001135729	172097	+	TSC_hg19_v1_chr22_+_35695855 NM_001135730 NM_001135732 NM_005488 AK026576 AJ006973 AY358980	172661	+	CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)##NM_001135730|TOM1|10043|target of myb1 (chicken)##NM_001135732|TOM1|10043|target of myb1 (chicken)##NM_005488|TOM1|10043|target of myb1 (chicken)##AK026576|TOM1|10043|target of myb1 (chicken)##AJ006973|TOM1|10043|target of myb1 (chicken)##AY358980|TOM1|10043|target of myb1 (chicken)	0.0	
chr5	38265790	38265902	reg1026947.p1	4.806	+	CU687828 TSC_hg19_v1_chr5_+_38258922	-6957	+	BX647551 TSC_hg19_v1_chr5_+_38258660 BC063822 AK291602	-7180	+	NM_001205301 NM_152403 AK096474 TSC_hg19_v1_chr5_+_38258532	-7323	+	NM_182798 AK097549 BC031251	137795	+	NM_182801 BC033177 AK092994 AX747843 BC033188	179778	+	TSC_hg19_v1_chr5_-_38556749 AK290059 NM_001127671	290882	-	BX647551|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC063822|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK291602|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_001205301|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_152403|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK096474|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_182798|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK097549|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC031251|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_182801|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033177|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK092994|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033188|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha	0.99857	CTCF.p2:-2:0.999
chr7	25005573	25005753	reg1026401.p1	4.806	+	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-208066	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-208324	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	-208596	-	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	14081	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	159214	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	159277	-	NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic	0.0	
chr17	2157376	2157545	reg1030792.p2	4.805	+	DQ187313 NM_001098202	-197903	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-199062	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-212152	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	49352	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	49580	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	49792	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.0	
chr17	44026507	44026626	reg1029166.p2	4.805	+	TSC_hg19_v1_chr17_+_43972018 J03778	-54542	+	BC000558 TSC_hg19_v1_chr17_+_43972002	-54564	+	TSC_hg19_v1_chr17_+_43971919 AK095802 AK299658 AK299704	-54640	+	TSC_hg19_v1_chr17_+_44068829 AY526356	42268	+	BC130319 BC130321 NM_001007532 AY179170	50064	+	TSC_hg19_v1_chr17_+_44101553 AB073354	75004	+	J03778|MAPT|4137|microtubule-associated protein tau##BC000558|MAPT|4137|microtubule-associated protein tau##AK095802|MAPT|4137|microtubule-associated protein tau##AK299658|MAPT|4137|microtubule-associated protein tau##AK299704|MAPT|4137|microtubule-associated protein tau##AY526356|MAPT|4137|microtubule-associated protein tau##BC130319|STH|246744|saitohin##BC130321|STH|246744|saitohin##NM_001007532|STH|246744|saitohin##AY179170|STH|246744|saitohin##AB073354|MAPT|4137|microtubule-associated protein tau	0.390513	CTCF.p2:45:0.391
chr20	17663355	17663512	reg1027238.p1	4.805	+	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	-550	-	BC128578 BC128577 TSC_hg19_v1_chr20_-_17662793 AF006751	-668	-	TSC_hg19_v1_chr20_-_17641123 AB287347 AB384598	-22297	-	NM_001159495	10886	+	BC054871 NM_001014977 NM_178477 BC062735	17165	+	BT007191 AB464237 TSC_hg19_v1_chr20_-_17949155 AK223308 AK001793 AK129505 NM_014426 BC093623 BC093980 BC143274	285781	-	AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128578|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128577|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AF006751|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AB287347|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001159495|BANF2|140836|barrier to autointegration factor 2##BC054871|BANF2|140836|barrier to autointegration factor 2##NM_001014977|BANF2|140836|barrier to autointegration factor 2##NM_178477|BANF2|140836|barrier to autointegration factor 2##BC062735|BANF2|140836|barrier to autointegration factor 2##BT007191|SNX5|27131|sorting nexin 5##AK223308|SNX5|27131|sorting nexin 5##AK001793|SNX5|27131|sorting nexin 5##AK129505|SNX5|27131|sorting nexin 5##NM_014426|SNX5|27131|sorting nexin 5##BC093623|SNX5|27131|sorting nexin 5##BC093980|SNX5|27131|sorting nexin 5##BC143274|SNX5|27131|sorting nexin 5	0.0	
chr7	41745032	41745114	reg1007533.p2	4.805	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-2388	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1570464	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1570542	+	NM_000168	531544	-	TSC_hg19_v1_chr7_-_42276797 AK308429	531722	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	1206516	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.0	
chr2	96812212	96812349	reg1026870.p1	4.804	+	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	-1121	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	-1326	-	BC107126 AJ537600 BC107127 NM_001002036	-8107	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	61775	-	TSC_hg19_v1_chr2_+_96874144 AK311432	61874	+	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	62254	-	BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.0	
chr5	65519633	65519747	reg1029688.p1	4.804	+	BC067770 NM_139168	-79028	+	TSC_hg19_v1_chr5_+_65440162 AK308287 BC017000 AK091758 AX747166 BC047322	-79521	+	TSC_hg19_v1_chr5_+_65440053 NM_001077199	-79630	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	372518	+	AY830839 BC018692 NM_015183	604913	+	BC109069 BC109070 D83597 NM_005582 AK313177	972910	-	BC067770|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_139168|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK308287|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC017000|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##AK091758|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC047322|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_001077199|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule	1.185987	CTCF.p2:-15:0.992
chr6	106958480	106958647	reg1028600.p1	4.804	+	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	-184900	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	-185031	-	BC002699 TSC_hg19_v1_chr6_-_106773313	-185255	-	AK056705 NM_001624	1166	+	TSC_hg19_v1_chr6_+_106960443 U83115	1848	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	118717	-	CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK056705|AIM1|202|absent in melanoma 1##NM_001624|AIM1|202|absent in melanoma 1##U83115|AIM1|202|absent in melanoma 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1	0.435585	CTCF.p2:-25:0.436
chr17	65374363	65374436	reg1010018.p1	4.803	+	BC007905 NM_012417 NM_181671	-476	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-811	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-990	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	339651	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	447303	+	AK293224 TSC_hg19_v1_chr17_+_65822221	447818	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.550977	CTCF.p2:-21:0.551
chr3	111579344	111579505	reg1022869.p2	4.803	+	AL832476 AK092996 AX747845 TSC_hg19_v1_chr3_+_111578690 AB209903	-750	+	AL832205 TSC_hg19_v1_chr3_+_111578609	-815	+	TSC_hg19_v1_chr3_+_111578598 NM_001134439 BC038806	-859	+	NM_018394 TSC_hg19_v1_chr3_+_111697885 AK300018 BC014516 AK093591 AK002204 AB528058 AM392560	118443	+	NM_001008272 NM_013259 AF303058 AF087855 AK315289 TSC_hg19_v1_chr3_+_111717781 BC015329	138283	+	NM_001008273 BC004477 TSC_hg19_v1_chr3_+_111718179 AF112201 BT007408 CU677265	138713	+	AL832476|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK092996|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AB209903|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AL832205|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001134439|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##BC038806|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_018394|ABHD10|55347|abhydrolase domain containing 10##AK300018|ABHD10|55347|abhydrolase domain containing 10##BC014516|ABHD10|55347|abhydrolase domain containing 10##AK002204|ABHD10|55347|abhydrolase domain containing 10##AM392560|ABHD10|55347|abhydrolase domain containing 10##NM_001008272|TAGLN3|29114|transgelin 3##NM_013259|TAGLN3|29114|transgelin 3##AF303058|TAGLN3|29114|transgelin 3##AF087855|TAGLN3|29114|transgelin 3##AK315289|TAGLN3|29114|transgelin 3##BC015329|TAGLN3|29114|transgelin 3##NM_001008273|TAGLN3|29114|transgelin 3##AF112201|TAGLN3|29114|transgelin 3##BT007408|TAGLN3|29114|transgelin 3	0.022945	
chr3	195283355	195283450	reg1041249.p2	4.803	+	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	-13289	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	-119700	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	-291552	-	TSC_hg19_v1_chr3_-_195306274 BT019860 BT019861 CR456838 CR541773 CU675645 DQ892668 DQ896124	22900	-	J02611 BC007402 TSC_hg19_v1_chr3_-_195310812 AK312090 AK294523	27428	-	TSC_hg19_v1_chr3_-_195310989 NM_001647	27628	-	BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##BT019860|APOD|347|apolipoprotein D##BT019861|APOD|347|apolipoprotein D##CR456838|APOD|347|apolipoprotein D##CR541773|APOD|347|apolipoprotein D##DQ892668|APOD|347|apolipoprotein D##DQ896124|APOD|347|apolipoprotein D##J02611|APOD|347|apolipoprotein D##BC007402|APOD|347|apolipoprotein D##AK312090|APOD|347|apolipoprotein D##AK294523|APOD|347|apolipoprotein D##NM_001647|APOD|347|apolipoprotein D	0.218697	
chr10	95462338	95462483	reg1021878.p2	4.802	+	TSC_hg19_v1_chr10_-_95462320 AJ431721 AJ431722 AJ431723 AJ431724 AJ431725 AK090955 AX746703 NM_145246	-75	-	NM_006204 U31973 BC111377	-90003	+	X00129 TSC_hg19_v1_chr10_-_95360993 BC020633 NM_006744	-101432	-	NM_005097 BC022500 AF055636 AF473548 AK309416 AY358885 AK303956	55236	+	TSC_hg19_v1_chr10_+_95653753 AK091309 AX746907 NM_001134658 NM_153226 BC036382 BC058549 BC143283 BC143284 BC104814 BC047102	191330	+	TSC_hg19_v1_chr10_+_95753696 AB040949 BC151854 NM_016341	291304	+	AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_006204|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##U31973|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##BC111377|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##X00129|RBP4|5950|retinol binding protein 4, plasma##BC020633|RBP4|5950|retinol binding protein 4, plasma##NM_006744|RBP4|5950|retinol binding protein 4, plasma##NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1##BC022500|LGI1|9211|leucine-rich, glioma inactivated 1##AF055636|LGI1|9211|leucine-rich, glioma inactivated 1##AF473548|LGI1|9211|leucine-rich, glioma inactivated 1##AK309416|LGI1|9211|leucine-rich, glioma inactivated 1##AY358885|LGI1|9211|leucine-rich, glioma inactivated 1##AK303956|LGI1|9211|leucine-rich, glioma inactivated 1##AK091309|SLC35G1|159371|solute carrier family 35, member G1##NM_001134658|SLC35G1|159371|solute carrier family 35, member G1##NM_153226|SLC35G1|159371|solute carrier family 35, member G1##BC036382|SLC35G1|159371|solute carrier family 35, member G1##BC143284|SLC35G1|159371|solute carrier family 35, member G1##BC104814|SLC35G1|159371|solute carrier family 35, member G1##BC047102|SLC35G1|159371|solute carrier family 35, member G1##AB040949|PLCE1|51196|phospholipase C, epsilon 1##BC151854|PLCE1|51196|phospholipase C, epsilon 1##NM_016341|PLCE1|51196|phospholipase C, epsilon 1	0.0	
chr15	90776506	90776634	reg1027506.p1	4.802	+	TSC_hg19_v1_chr15_+_90744561 AY445887 NM_198925 AB051532 BC126438 BC144141 BC110853 AB385501 HQ258520 AK026108	-31880	+	TSC_hg19_v1_chr15_+_90728151 NM_020210 AK289991 AY358392	-48374	+	TSC_hg19_v1_chr15_-_90645713 AK312627	-130843	-	TSC_hg19_v1_chr15_-_90777138 AB451276 AB451406 AB463454 CR456955 DQ891196 DQ894379	558	-	TSC_hg19_v1_chr15_-_90777174 BC000846 U85611 U82226	595	-	TSC_hg19_v1_chr15_-_90777199 NM_006384	664	-	AY445887|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_198925|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB051532|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC126438|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC144141|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC110853|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##HQ258520|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK026108|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_020210|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK289991|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY358392|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AB451276|CIB1|10519|calcium and integrin binding 1 (calmyrin)##AB451406|CIB1|10519|calcium and integrin binding 1 (calmyrin)##CR456955|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ891196|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ894379|CIB1|10519|calcium and integrin binding 1 (calmyrin)##BC000846|CIB1|10519|calcium and integrin binding 1 (calmyrin)##U85611|CIB1|10519|calcium and integrin binding 1 (calmyrin)##U82226|CIB1|10519|calcium and integrin binding 1 (calmyrin)##NM_006384|CIB1|10519|calcium and integrin binding 1 (calmyrin)	0.018836	
chr1	94146353	94146534	reg1030081.p2	4.802	+	TSC_hg19_v1_chr1_+_94057602 BC084562	-88836	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-88903	+	TSC_hg19_v1_chr1_+_93913680 NM_001024948 NM_001164473 NM_017737 AY514449	-232721	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	884	-	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	198271	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	198305	-	BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##NM_001024948|FNBP1L|54874|formin binding protein 1-like##NM_001164473|FNBP1L|54874|formin binding protein 1-like##NM_017737|FNBP1L|54874|formin binding protein 1-like##AY514449|FNBP1L|54874|formin binding protein 1-like##U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2	0.0	
chr3	45926436	45926550	reg1029462.p2	4.802	+	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	-42898	-	TSC_hg19_v1_chr3_-_45838112 AF125107	-88345	-	BC036073 TSC_hg19_v1_chr3_-_45838029 NM_020208 NM_022405	-88463	-	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	1562	+	NM_006564 Y13248	58479	+	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	110828	-	BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC036073|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_020208|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_022405|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1	0.0	
chr5	131813828	131813953	reg1031199.p2	4.802	+	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-67262	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-108382	+	BX538252 TSC_hg19_v1_chr5_-_131705330	-108591	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	12591	-	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	65302	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	78750	+	AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BX538252|LOC553103|553103|uncharacterized LOC553103##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)	0.0	
chr8	11161980	11162155	reg1029685.p1	4.802	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	-19712	+	TSC_hg19_v1_chr8_+_11141999 BC034990 NM_015458	-20055	+	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	-103202	-	AJ291677 NM_054028 BC131696	26443	+	BC038546 TSC_hg19_v1_chr8_-_11205010	42937	-	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	162162	-	AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9##BC034990|MTMR9|66036|myotubularin related protein 9##NM_015458|MTMR9|66036|myotubularin related protein 9##AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AJ291677|SLC35G5|83650|solute carrier family 35, member G5##NM_054028|SLC35G5|83650|solute carrier family 35, member G5##BC131696|SLC35G5|83650|solute carrier family 35, member G5##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A	0.262454	CTCF.p2:12:0.262
chr13	36363566	36363700	reg1032859.p1	4.801	+	AK294737 NM_001204197 TSC_hg19_v1_chr13_+_36050945 AK315939	-312708	+	BC028170 AB593021 TSC_hg19_v1_chr13_-_36050827 AB593022 AK313185 AB073388 NM_005584	-312837	-	TSC_hg19_v1_chr13_+_35516429 NM_015678 AF467288	-847175	+	AK299059 AK311183 AK295777 TSC_hg19_v1_chr13_-_36429805 CR627093 AK308925 AK311434 AK311438 AK311195 NM_001195415 NM_001195416 NM_001195430	66264	-	TSC_hg19_v1_chr13_-_36705434 AB002367 BC152456	341804	-	AK295102 TSC_hg19_v1_chr13_-_36705468	341840	-	AK294737|NBEA|26960|neurobeachin##NM_001204197|NBEA|26960|neurobeachin##AK315939|NBEA|26960|neurobeachin##BC028170|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593021|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB593022|MAB21L1|4081|mab-21-like 1 (C. elegans)##AK313185|MAB21L1|4081|mab-21-like 1 (C. elegans)##AB073388|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_005584|MAB21L1|4081|mab-21-like 1 (C. elegans)##NM_015678|NBEA|26960|neurobeachin##AF467288|NBEA|26960|neurobeachin##AK299059|DCLK1|9201|doublecortin-like kinase 1##AK311183|DCLK1|9201|doublecortin-like kinase 1##AK295777|DCLK1|9201|doublecortin-like kinase 1##CR627093|DCLK1|9201|doublecortin-like kinase 1##AK308925|DCLK1|9201|doublecortin-like kinase 1##AK311434|DCLK1|9201|doublecortin-like kinase 1##AK311438|DCLK1|9201|doublecortin-like kinase 1##AK311195|DCLK1|9201|doublecortin-like kinase 1##NM_001195415|DCLK1|9201|doublecortin-like kinase 1##NM_001195416|DCLK1|9201|doublecortin-like kinase 1##NM_001195430|DCLK1|9201|doublecortin-like kinase 1##AB002367|DCLK1|9201|doublecortin-like kinase 1##BC152456|DCLK1|9201|doublecortin-like kinase 1##AK295102|DCLK1|9201|doublecortin-like kinase 1	0.986248	CTCF.p2:20:0.986
chr15	66273312	66273432	reg1025060.p1	4.801	+	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	-111525	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-188779	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	-188899	-	TSC_hg19_v1_chr15_-_66321664 AK054827	48321	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	272705	-	NM_133375 AK295392 BC022089	312273	+	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	0.929537	CTCF.p2:17:0.930
chr2	218764406	218764517	reg1027863.p2	4.801	+	BC029516 NM_003284	-1039680	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-1204201	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-1204895	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	44320	-	AK001785 TSC_hg19_v1_chr2_-_218843551	79085	-	TSC_hg19_v1_chr2_-_218867719 AK309785	103262	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.767271	CTCF.p2:-9:0.767
chrX	130202972	130203112	reg1033358.p1	4.801	+	AK128203 NM_144967 AK296748 AX721074	-10770	+	TSC_hg19_v1_chrX_-_130037207 AK000353 NM_006375 NM_182314	-165836	-	TSC_hg19_v1_chrX_-_130037184 BC108713 AL133207 AK289812 AK289837	-165865	-	BC028312 NM_001170963	219992	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	220220	-	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	220370	-	AK128203|ARHGAP36|158763|Rho GTPase activating protein 36##NM_144967|ARHGAP36|158763|Rho GTPase activating protein 36##AK296748|ARHGAP36|158763|Rho GTPase activating protein 36##AK000353|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_006375|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##NM_182314|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##BC108713|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AL133207|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289812|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##AK289837|ENOX2|10495|ecto-NOX disulfide-thiol exchanger 2##BC028312|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170963|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1	0.139929	
chrX	154881011	154881154	reg1030508.p1	4.801	+	AF373407 BC025269 BC009673 TSC_hg19_v1_chrX_-_154842563 AK291694 AK001589 NM_001184797 NM_018196	-38526	-	BC101409 BC101415 BC101417 BC101418 CR542230 NM_001017991 BC134365 HQ258044 AF254576 NM_001017990 NM_080720 BC130510 BC130512	-191457	-	NM_001007523 NM_001007524 AB462986 BC039693 DQ896667 AM393473 AM393736 BC071963 NM_012151	-192815	-	AK289543 AK311508 NM_005840 AK125483	116352	+	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	229909	+	M84747 NM_002186 AK303178 BC025298 BC051337 S71404 CU690808	346259	+	AF373407|TMLHE|55217|trimethyllysine hydroxylase, epsilon##BC025269|TMLHE|55217|trimethyllysine hydroxylase, epsilon##BC009673|TMLHE|55217|trimethyllysine hydroxylase, epsilon##AK291694|TMLHE|55217|trimethyllysine hydroxylase, epsilon##AK001589|TMLHE|55217|trimethyllysine hydroxylase, epsilon##NM_001184797|TMLHE|55217|trimethyllysine hydroxylase, epsilon##NM_018196|TMLHE|55217|trimethyllysine hydroxylase, epsilon##BC101409|H2AFB2|474381|H2A histone family, member B2##BC101415|H2AFB3|83740|H2A histone family, member B3##BC101417|H2AFB3|83740|H2A histone family, member B3##BC101418|H2AFB3|83740|H2A histone family, member B3##CR542230|H2AFB1|474382|H2A histone family, member B1##NM_001017991|H2AFB2|474381|H2A histone family, member B2##BC134365|H2AFB2|474381|H2A histone family, member B2##HQ258044|H2AFB3|83740|H2A histone family, member B3##AF254576|H2AFB3|83740|H2A histone family, member B3##NM_001017990|H2AFB1|474382|H2A histone family, member B1##NM_080720|H2AFB3|83740|H2A histone family, member B3##BC130510|H2AFB3|83740|H2A histone family, member B3##BC130512|H2AFB3|83740|H2A histone family, member B3##NM_001007523|F8A2|474383|coagulation factor VIII-associated 2##NM_001007524|F8A3|474384|coagulation factor VIII-associated 3##BC039693|F8A1|8263|coagulation factor VIII-associated 1##DQ896667|F8A1|8263|coagulation factor VIII-associated 1##AM393473|F8A1|8263|coagulation factor VIII-associated 1##AM393736|F8A1|8263|coagulation factor VIII-associated 1##BC071963|F8A1|8263|coagulation factor VIII-associated 1##NM_012151|F8A1|8263|coagulation factor VIII-associated 1##AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7##M84747|IL9R|3581|interleukin 9 receptor##NM_002186|IL9R|3581|interleukin 9 receptor##AK303178|IL9R|3581|interleukin 9 receptor##BC025298|IL9R|3581|interleukin 9 receptor##BC051337|IL9R|3581|interleukin 9 receptor##S71404|IL9R|3581|interleukin 9 receptor	0.998198	CTCF.p2:12:0.998
chr10	82020536	82020679	reg1025302.p1	4.800	+	TSC_hg19_v1_chr10_-_81965334 AK056107	-55225	-	AJ278463 AJ278464 AJ278465 AK000567 NM_001157 NM_145868 NM_145869 TSC_hg19_v1_chr10_-_81965329	-55278	-	TSC_hg19_v1_chr10_-_81965293 AK301047	-55305	-	DQ891073 DQ894256 D49357 X69078 AK290820 BC018359 TSC_hg19_v1_chr10_-_82049413 NM_000429	28698	-	BC019250 NM_138812 AK125908 AK292542	95897	-	AK093378 AX748088 NM_032372	95950	+	AK056107|ANXA11|311|annexin A11##AJ278463|ANXA11|311|annexin A11##AJ278464|ANXA11|311|annexin A11##AJ278465|ANXA11|311|annexin A11##AK000567|ANXA11|311|annexin A11##NM_001157|ANXA11|311|annexin A11##NM_145868|ANXA11|311|annexin A11##NM_145869|ANXA11|311|annexin A11##AK301047|ANXA11|311|annexin A11##DQ891073|MAT1A|4143|methionine adenosyltransferase I, alpha##DQ894256|MAT1A|4143|methionine adenosyltransferase I, alpha##D49357|MAT1A|4143|methionine adenosyltransferase I, alpha##X69078|MAT1A|4143|methionine adenosyltransferase I, alpha##AK290820|MAT1A|4143|methionine adenosyltransferase I, alpha##BC018359|MAT1A|4143|methionine adenosyltransferase I, alpha##NM_000429|MAT1A|4143|methionine adenosyltransferase I, alpha##BC019250|DYDC1|143241|DPY30 domain containing 1##NM_138812|DYDC1|143241|DPY30 domain containing 1##AK125908|DYDC1|143241|DPY30 domain containing 1##AK292542|DYDC1|143241|DPY30 domain containing 1##AK093378|DYDC2|84332|DPY30 domain containing 2##NM_032372|DYDC2|84332|DPY30 domain containing 2	0.996687	CTCF.p2:-20:0.997
chr12	121548060	121548240	reg1006806.p1	4.800	+	TSC_hg19_v1_chr12_-_121476781 HQ258301 AJ225089 AK314419 NM_003733 NM_198213 AK023956 BC117408 BC117410	-71367	-	TSC_hg19_v1_chr12_-_121454291 AK222630 AK299170 AK301566 AK022510 AK225162 NM_022895 AK307971	-93856	-	TSC_hg19_v1_chr12_-_121454230 BC014661	-93906	-	NM_002562 TSC_hg19_v1_chr12_+_121570744 AK294126 AK290405 AK296432 BC011913 BC121157 BC121158 AB209709 BC007679 AK090866 AK225163 AX746656 Y09561 GQ180122 DQ893457 DQ896337 AB590390 CU680114 AY847298 AY847299 AY847300 AY847301 AY847302 AY847303 AY847304 DQ399293	22551	+	U83993 NM_002560	99511	+	TSC_hg19_v1_chr12_+_121647931 AK293599 AK293660 AK297704 AK308549 AK308868 BC017458	99742	+	HQ258301|OASL|8638|2'-5'-oligoadenylate synthetase-like##AJ225089|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK314419|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_003733|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_198213|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK023956|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117408|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117410|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK222630|C12orf43|64897|chromosome 12 open reading frame 43##AK299170|C12orf43|64897|chromosome 12 open reading frame 43##AK301566|C12orf43|64897|chromosome 12 open reading frame 43##AK022510|C12orf43|64897|chromosome 12 open reading frame 43##AK225162|C12orf43|64897|chromosome 12 open reading frame 43##NM_022895|C12orf43|64897|chromosome 12 open reading frame 43##AK307971|C12orf43|64897|chromosome 12 open reading frame 43##BC014661|C12orf43|64897|chromosome 12 open reading frame 43##NM_002562|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK294126|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK290405|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK296432|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC011913|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121157|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121158|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AB209709|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC007679|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK090866|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK225163|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##Y09561|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##GQ180122|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ893457|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ896337|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847298|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847299|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847300|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847301|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847302|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847303|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847304|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ399293|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##U83993|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##NM_002560|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293599|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293660|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK297704|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308549|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308868|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC017458|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4	0.0	
chr14	39087876	39087959	reg1034092.p2	4.800	+	AY358395 BX248017 NM_175060	-362361	-	AY573061 BC031567 TSC_hg19_v1_chr14_-_38725270 AY606132	-362633	-	AB384936 DQ893328 DQ896644 TSC_hg19_v1_chr14_+_38678642	-409298	+	AK293944 TSC_hg19_v1_chr14_-_39572386 AK312259 X97064	484427	-	TSC_hg19_v1_chr14_-_39572440 AK299862 BC036649 NM_006364 AK303485	484516	-	AF027150 NM_001009182 NM_001009183 NM_003616 BC028095 BC104968 AK313947 AB037701 AB037702 AB037703	495550	+	AY358395|CLEC14A|161198|C-type lectin domain family 14, member A##BX248017|CLEC14A|161198|C-type lectin domain family 14, member A##NM_175060|CLEC14A|161198|C-type lectin domain family 14, member A##AY573061|CLEC14A|161198|C-type lectin domain family 14, member A##BC031567|CLEC14A|161198|C-type lectin domain family 14, member A##AY606132|CLEC14A|161198|C-type lectin domain family 14, member A##DQ893328|SSTR1|6751|somatostatin receptor 1##DQ896644|SSTR1|6751|somatostatin receptor 1##AK293944|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK312259|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##X97064|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK299862|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##BC036649|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##NM_006364|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK303485|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AF027150|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_001009182|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_001009183|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_003616|GEMIN2|8487|gem (nuclear organelle) associated protein 2##BC028095|GEMIN2|8487|gem (nuclear organelle) associated protein 2##BC104968|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AK313947|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037701|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037702|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037703|GEMIN2|8487|gem (nuclear organelle) associated protein 2	0.020058	
chr18	2932451	2932631	reg1008003.p2	4.800	+	AB026706 TSC_hg19_v1_chr18_+_2907037	-25540	+	TSC_hg19_v1_chr18_+_2847006 AF270513 NM_032048 BC032231 BC136541	-85510	+	BC006008 NM_015295 TSC_hg19_v1_chr18_+_2655885	-276627	+	BC152448 D87436 NM_014646	79403	-	BC116183 BC116184 TSC_hg19_v1_chr18_-_3219875	287319	-	TSC_hg19_v1_chr18_-_3219987 AJ621424 AK125322 NM_003803 NM_019856	287504	-	AB026706|EMILIN2|84034|elastin microfibril interfacer 2##AF270513|EMILIN2|84034|elastin microfibril interfacer 2##NM_032048|EMILIN2|84034|elastin microfibril interfacer 2##BC032231|EMILIN2|84034|elastin microfibril interfacer 2##BC136541|EMILIN2|84034|elastin microfibril interfacer 2##BC006008|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##NM_015295|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##BC152448|LPIN2|9663|lipin 2##D87436|LPIN2|9663|lipin 2##NM_014646|LPIN2|9663|lipin 2##BC116183|MYOM1|8736|myomesin 1, 185kDa##BC116184|MYOM1|8736|myomesin 1, 185kDa##AJ621424|MYOM1|8736|myomesin 1, 185kDa##AK125322|MYOM1|8736|myomesin 1, 185kDa##NM_003803|MYOM1|8736|myomesin 1, 185kDa##NM_019856|MYOM1|8736|myomesin 1, 185kDa	0.0	
chr2	153031854	153032015	reg1011724.p1	4.800	+	TSC_hg19_v1_chr2_-_152955813 AK291378	-76123	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	-76387	-	AK294398 AK316045 TSC_hg19_v1_chr2_-_152955250 NM_001005746	-76704	-	TSC_hg19_v1_chr2_-_153032266 AB463258 AM393419 CU688564 DQ892427 DQ895641 AK292265 AK292847 AK310863 AF042273 AF042274 AL133600 BC022277 BC028740 NM_005843	416	-	TSC_hg19_v1_chr2_+_153191687 NM_052905	159736	+	BC113878 BC114438 TSC_hg19_v1_chr2_+_153191857 AB067489 BC167159 AB385514	160039	+	AK291378|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##NM_052905|FMNL2|114793|formin-like 2##BC113878|FMNL2|114793|formin-like 2##BC114438|FMNL2|114793|formin-like 2##AB067489|FMNL2|114793|formin-like 2##BC167159|FMNL2|114793|formin-like 2	0.0	
chr4	18595116	18595226	reg1006241.p1	4.800	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-571705	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-782560	+	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	-782898	-	AB017168 NM_004787 BC117190 BC143978 AF133270	1660165	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	2106896	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	2390458	-	AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16##AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4	0.0	
chr6	113201175	113201292	reg1032450.p1	4.800	+	AK122906 NM_001013734	-532702	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-625338	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-625428	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	977501	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	1091039	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	1091103	-	AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2	0.96789	CTCF.p2:-8:0.968
chr6	17094055	17094157	reg1031376.p1	4.800	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	-332409	-	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-855255	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-950796	+	NM_001190766	8382	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	187748	+	NM_001143941	188188	+	BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24##NM_001143941|RBM24|221662|RNA binding motif protein 24	0.982455	CTCF.p2:14:0.982
chr1	200839165	200839346	reg1028691.p2	4.799	+	TSC_hg19_v1_chr1_+_200708732 AK095640 NM_203459	-130584	+	TSC_hg19_v1_chr1_-_200639091 BC041801 NM_001031725	-200147	-	AK299219 BC020201 TSC_hg19_v1_chr1_-_200639024 AL136611 BC014183 AK307569	-200226	-	BC126386 BC126388 AK315339 NM_005298	2868	+	TSC_hg19_v1_chr1_+_200860668 NM_018265 AK001583 AK001763 BC106877	21391	+	AK316510 NM_001142569 TSC_hg19_v1_chr1_+_200864027 AK303885	24742	+	AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##BC041801|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_001031725|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK299219|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC020201|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AL136611|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC014183|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK307569|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC126386|GPR25|2848|G protein-coupled receptor 25##BC126388|GPR25|2848|G protein-coupled receptor 25##AK315339|GPR25|2848|G protein-coupled receptor 25##NM_005298|GPR25|2848|G protein-coupled receptor 25##NM_018265|C1orf106|55765|chromosome 1 open reading frame 106##AK001583|C1orf106|55765|chromosome 1 open reading frame 106##AK001763|C1orf106|55765|chromosome 1 open reading frame 106##BC106877|C1orf106|55765|chromosome 1 open reading frame 106##AK316510|C1orf106|55765|chromosome 1 open reading frame 106##NM_001142569|C1orf106|55765|chromosome 1 open reading frame 106##AK303885|C1orf106|55765|chromosome 1 open reading frame 106	0.0	
chr12	11775090	11775192	reg1028194.p1	4.799	+	BC044827 NM_006248	-226650	-	BC044827 K03205 K03206 BC141917 K03204 NM_005039 NM_199353 NM_199354 AX772842	-266625	-	BC130386 BC035362 K03207 NM_002723 BC128191	-311781	-	TSC_hg19_v1_chr12_+_11802659 AK289441	27532	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	27633	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	27845	+	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2##BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##K03205|PRB1|5542|proline-rich protein BstNI subfamily 1##K03206|PRB1|5542|proline-rich protein BstNI subfamily 1##BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1##K03204|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1##BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4##BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4##K03207|PRB4|5545|proline-rich protein BstNI subfamily 4##NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4##BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4##AK289441|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6	0.0	
chr12	57918041	57918222	reg1026089.p3	4.799	+	TSC_hg19_v1_chr12_+_57916642 AK056399 AK296990 NM_052897 BC065530	-1481	+	TSC_hg19_v1_chr12_-_57914295 AK316581 BC003637 BC107859 S40706 AY461580 NM_001195053 NM_001195054 NM_001195055 NM_001195056 NM_001195057 NM_004083	-3837	-	AK092986 AK222767 AX747839 TSC_hg19_v1_chr12_+_57881853 AK290857 BC011639 X94754 BC002384 BC006328 BC011849 AB590802 BT007338 BC015011	-36252	+	AL834230 TSC_hg19_v1_chr12_+_57920572	2367	+	AY189155 CU674356 AB590544 AK292364 BC009468 U50733 TSC_hg19_v1_chr12_-_57940961 AK096242 BC014083 AK314705 AK098794 AK222693 BC000718 NM_006400 AK055682	22797	-	AB290174 BC140009 TSC_hg19_v1_chr12_+_57943796	25659	+	AK056399|MBD6|114785|methyl-CpG binding domain protein 6##AK296990|MBD6|114785|methyl-CpG binding domain protein 6##NM_052897|MBD6|114785|methyl-CpG binding domain protein 6##BC065530|MBD6|114785|methyl-CpG binding domain protein 6##AK316581|DDIT3|1649|DNA-damage-inducible transcript 3##BC003637|DDIT3|1649|DNA-damage-inducible transcript 3##BC107859|DDIT3|1649|DNA-damage-inducible transcript 3##S40706|DDIT3|1649|DNA-damage-inducible transcript 3##AY461580|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195053|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195054|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195055|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195056|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195057|DDIT3|1649|DNA-damage-inducible transcript 3##NM_004083|DDIT3|1649|DNA-damage-inducible transcript 3##AK092986|MARS|4141|methionyl-tRNA synthetase##AK222767|MARS|4141|methionyl-tRNA synthetase##AK290857|MARS|4141|methionyl-tRNA synthetase##BC011639|MARS|4141|methionyl-tRNA synthetase##X94754|MARS|4141|methionyl-tRNA synthetase##BC002384|MARS|4141|methionyl-tRNA synthetase##BC006328|MARS|4141|methionyl-tRNA synthetase##BC011849|MARS|4141|methionyl-tRNA synthetase##BT007338|MARS|4141|methionyl-tRNA synthetase##BC015011|MARS|4141|methionyl-tRNA synthetase##AL834230|MBD6|114785|methyl-CpG binding domain protein 6##AY189155|DCTN2|10540|dynactin 2 (p50)##AK292364|DCTN2|10540|dynactin 2 (p50)##BC009468|DCTN2|10540|dynactin 2 (p50)##U50733|DCTN2|10540|dynactin 2 (p50)##AK096242|DCTN2|10540|dynactin 2 (p50)##BC014083|DCTN2|10540|dynactin 2 (p50)##AK314705|DCTN2|10540|dynactin 2 (p50)##AK098794|DCTN2|10540|dynactin 2 (p50)##AK222693|DCTN2|10540|dynactin 2 (p50)##BC000718|DCTN2|10540|dynactin 2 (p50)##NM_006400|DCTN2|10540|dynactin 2 (p50)##AK055682|DCTN2|10540|dynactin 2 (p50)##AB290174|KIF5A|3798|kinesin family member 5A##BC140009|KIF5A|3798|kinesin family member 5A	0.0	
chr15	100710549	100710726	reg1028055.p1	4.799	+	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-437003	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-437033	-	TSC_hg19_v1_chr15_-_100273591 BC084545 AK124852	-437071	-	AB527357 AJ315735 NM_139057	171506	-	BC034500 BC034970 NM_178842	374260	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	431772	-	BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC084545|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK124852|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)	0.0	
chr17	75210896	75210991	reg1028217.p1	4.799	+	AK293206 NM_001144001	-29649	+	TSC_hg19_v1_chr17_+_75137104 AK290913 BC142979 BC136523 BC136525	-73808	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	-73909	+	NM_001113491 AF189713 TSC_hg19_v1_chr17_+_75277583 AJ312323 AK300270 AK300268 BC054004	66599	+	AK290368 NM_001113492 TSC_hg19_v1_chr17_+_75283980	73036	+	TSC_hg19_v1_chr17_+_75315629 AJ312321 NM_006640	104667	+	AK293206|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001144001|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AK290913|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC142979|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136523|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136525|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001113491|SEPT9|10801|septin 9##AF189713|SEPT9|10801|septin 9##AJ312323|SEPT9|10801|septin 9##AK300270|SEPT9|10801|septin 9##AK300268|SEPT9|10801|septin 9##BC054004|SEPT9|10801|septin 9##AK290368|SEPT9|10801|septin 9##NM_001113492|SEPT9|10801|septin 9##AJ312321|SEPT9|10801|septin 9##NM_006640|SEPT9|10801|septin 9	1.063678	CTCF.p2:3:0.998
chr11	102322546	102322707	reg1028663.p2	4.798	+	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-104598	+	TSC_hg19_v1_chr11_+_102217944 AK303197	-104697	+	NM_001165 NM_182962 TSC_hg19_v1_chr11_+_102188214 AF070674	-134424	+	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	987	-	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	78833	-	AB527354 NM_004771 Y12779	173429	-	BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##AK303197|BIRC2|329|baculoviral IAP repeat containing 2##NM_001165|BIRC3|330|baculoviral IAP repeat containing 3##NM_182962|BIRC3|330|baculoviral IAP repeat containing 3##AF070674|BIRC3|330|baculoviral IAP repeat containing 3##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20	0.0	
chr19	22063733	22063822	reg1028984.p1	4.798	+	X59244 AK291353 CR933640 TSC_hg19_v1_chr19_-_22034868	-28946	-	TSC_hg19_v1_chr19_-_22018985 M61869 NM_003423 BC006528	-44796	-	BC035579 TSC_hg19_v1_chr19_-_21950382 AK308798 AK126551 NM_173531	-113402	-	BC038199 AK096236 NM_007153 AX721110	129958	-	BC036446 TSC_hg19_v1_chr19_+_22235260 AK056694 NM_033468	171482	+	TSC_hg19_v1_chr19_+_22235290 AF070651	171536	+	X59244|ZNF43|7594|zinc finger protein 43##AK291353|ZNF43|7594|zinc finger protein 43##CR933640|ZNF43|7594|zinc finger protein 43##M61869|ZNF43|7594|zinc finger protein 43##NM_003423|ZNF43|7594|zinc finger protein 43##BC006528|ZNF43|7594|zinc finger protein 43##BC035579|ZNF100|163227|zinc finger protein 100##AK308798|ZNF100|163227|zinc finger protein 100##AK126551|ZNF100|163227|zinc finger protein 100##NM_173531|ZNF100|163227|zinc finger protein 100##BC038199|ZNF208|7757|zinc finger protein 208##AK096236|ZNF208|7757|zinc finger protein 208##NM_007153|ZNF208|7757|zinc finger protein 208##BC036446|ZNF257|113835|zinc finger protein 257##AK056694|ZNF257|113835|zinc finger protein 257##NM_033468|ZNF257|113835|zinc finger protein 257##AF070651|ZNF257|113835|zinc finger protein 257	0.830069	CTCF.p2:-5:0.830
chr20	61371099	61371234	reg1019862.p1	4.798	+	TSC_hg19_v1_chr20_+_61340165 NM_002531 X70070	-30990	+	TSC_hg19_v1_chr20_+_61273854 BC015727 AK023410 AF205072 AF104334	-97319	+	TSC_hg19_v1_chr20_+_61273818 NM_016354	-97363	+	AK001776 NM_018270 TSC_hg19_v1_chr20_+_61427832 BC014235 BC009889 BC018841 AB085682 AB463516	56681	+	TSC_hg19_v1_chr20_+_61436186 NM_007346 AK314696 AK022234 AF109134 BC008768 BC014137 CU680798 DQ892943 EU176723 BC032666	65027	+	TSC_hg19_v1_chr20_+_61448401 BC011705 NM_001853 DQ892946 DQ896194 L41162	77237	+	NM_002531|NTSR1|4923|neurotensin receptor 1 (high affinity)##X70070|NTSR1|4923|neurotensin receptor 1 (high affinity)##BC015727|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AK023410|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AF205072|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AF104334|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##NM_016354|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1##AK001776|C20orf20|55257|chromosome 20 open reading frame 20##NM_018270|C20orf20|55257|chromosome 20 open reading frame 20##BC014235|C20orf20|55257|chromosome 20 open reading frame 20##BC009889|C20orf20|55257|chromosome 20 open reading frame 20##BC018841|C20orf20|55257|chromosome 20 open reading frame 20##AB085682|C20orf20|55257|chromosome 20 open reading frame 20##NM_007346|OGFR|11054|opioid growth factor receptor##AK314696|OGFR|11054|opioid growth factor receptor##AK022234|OGFR|11054|opioid growth factor receptor##AF109134|OGFR|11054|opioid growth factor receptor##BC008768|OGFR|11054|opioid growth factor receptor##BC014137|OGFR|11054|opioid growth factor receptor##DQ892943|OGFR|11054|opioid growth factor receptor##EU176723|OGFR|11054|opioid growth factor receptor##BC032666|OGFR|11054|opioid growth factor receptor##BC011705|COL9A3|1299|collagen, type IX, alpha 3##NM_001853|COL9A3|1299|collagen, type IX, alpha 3##DQ892946|COL9A3|1299|collagen, type IX, alpha 3##DQ896194|COL9A3|1299|collagen, type IX, alpha 3##L41162|COL9A3|1299|collagen, type IX, alpha 3	0.0	
chr17	40770656	40770803	reg1027152.p1	4.797	+	TSC_hg19_v1_chr17_+_40761700 AK313339 BC000619 M61764 AK311637 BT019931 CR407642 DQ891925 DQ895110	-9023	+	TSC_hg19_v1_chr17_-_40761405 NM_178126	-9305	-	TSC_hg19_v1_chr17_-_40761383 AK225797 AK091125 AX746792 BC049370	-9336	-	TSC_hg19_v1_chr17_+_40811298 NM_016437 BC108739 AK225134 BC051890 BC052283 AK022324 BC009670 CU679431 AB464326	40662	+	TSC_hg19_v1_chr17_-_40828093 AK096767	57363	-	TSC_hg19_v1_chr17_-_40829013 BC016062 AK024672 AB208939 BC052978 NM_024927	58084	-	AK313339|TUBG1|7283|tubulin, gamma 1##BC000619|TUBG1|7283|tubulin, gamma 1##M61764|TUBG1|7283|tubulin, gamma 1##BT019931|TUBG1|7283|tubulin, gamma 1##CR407642|TUBG1|7283|tubulin, gamma 1##DQ891925|TUBG1|7283|tubulin, gamma 1##DQ895110|TUBG1|7283|tubulin, gamma 1##NM_178126|FAM134C|162427|family with sequence similarity 134, member C##AK225797|FAM134C|162427|family with sequence similarity 134, member C##AK091125|FAM134C|162427|family with sequence similarity 134, member C##BC049370|FAM134C|162427|family with sequence similarity 134, member C##NM_016437|TUBG2|27175|tubulin, gamma 2##BC108739|TUBG2|27175|tubulin, gamma 2##AK225134|TUBG2|27175|tubulin, gamma 2##BC051890|TUBG2|27175|tubulin, gamma 2##BC052283|TUBG2|27175|tubulin, gamma 2##AK022324|TUBG2|27175|tubulin, gamma 2##BC009670|TUBG2|27175|tubulin, gamma 2##AK096767|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##BC016062|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AK024672|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##AB208939|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##BC052978|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3##NM_024927|PLEKHH3|79990|pleckstrin homology domain containing, family H (with MyTH4 domain) member 3	0.983074	CTCF.p2:28:0.804
chr3	53547724	53547891	reg1026550.p1	4.797	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	-18696	+	TSC_hg19_v1_chr3_+_53528709 M76558	-19148	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	-166214	-	TSC_hg19_v1_chr3_-_53880427 NM_018397	332612	-	TSC_hg19_v1_chr3_+_53880576 NM_018725	332765	+	TSC_hg19_v1_chr3_+_53880594 AK307749	332788	+	NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018397|CHDH|55349|choline dehydrogenase##NM_018725|IL17RB|55540|interleukin 17 receptor B##AK307749|IL17RB|55540|interleukin 17 receptor B	0.9504	CTCF.p2:-1:0.950
chr9	17802385	17802486	reg1025945.p1	4.797	+	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	-223339	+	TSC_hg19_v1_chr9_+_17134988 AK303973 AK308837 BX647069 AK098502 NM_001114395 NM_017738	-667418	+	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	-931669	-	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	671653	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	671748	+	BC033489 AK292245 AK057474 NM_153707	1230784	-	AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##AK303973|CNTLN|54875|centlein, centrosomal protein##AK308837|CNTLN|54875|centlein, centrosomal protein##BX647069|CNTLN|54875|centlein, centrosomal protein##AK098502|CNTLN|54875|centlein, centrosomal protein##NM_001114395|CNTLN|54875|centlein, centrosomal protein##NM_017738|CNTLN|54875|centlein, centrosomal protein##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1##BC033489|FAM154A|158297|family with sequence similarity 154, member A##AK292245|FAM154A|158297|family with sequence similarity 154, member A##AK057474|FAM154A|158297|family with sequence similarity 154, member A##NM_153707|FAM154A|158297|family with sequence similarity 154, member A	0.989333	CTCF.p2:1:0.989
chrX	117620224	117620360	reg1031374.p1	4.797	+	TSC_hg19_v1_chrX_+_117526665 AL834210	-93605	+	TSC_hg19_v1_chrX_+_117480490 AM393332 AM393787 EU831942 EU832037 AK304432	-139830	+	TSC_hg19_v1_chrX_+_117480068 NM_001184965 NM_001184966 NM_019045 AK127556 BX537578 AL833605 BX538087 AK299711 BC028697 BX648150	-140127	+	AY692226 NM_144658 TSC_hg19_v1_chrX_+_117629874	9580	+	TSC_hg19_v1_chrX_+_117861562 BC015768 NM_001560 Y10659 U81379 U81380 AK313467 Y09328 BC009960 AB528371 DQ893454 DQ896296 AB209849	241275	+	TSC_hg19_v1_chrX_+_117957786 AK122676 BC036572 BC031241 BC057841 NM_173798 BC018066	337530	+	AL834210|WDR44|54521|WD repeat domain 44##AM393332|WDR44|54521|WD repeat domain 44##AM393787|WDR44|54521|WD repeat domain 44##EU831942|WDR44|54521|WD repeat domain 44##EU832037|WDR44|54521|WD repeat domain 44##AK304432|WDR44|54521|WD repeat domain 44##NM_001184965|WDR44|54521|WD repeat domain 44##NM_001184966|WDR44|54521|WD repeat domain 44##NM_019045|WDR44|54521|WD repeat domain 44##AK127556|WDR44|54521|WD repeat domain 44##BX537578|WDR44|54521|WD repeat domain 44##AL833605|WDR44|54521|WD repeat domain 44##BX538087|WDR44|54521|WD repeat domain 44##AK299711|WDR44|54521|WD repeat domain 44##BC028697|WDR44|54521|WD repeat domain 44##BX648150|WDR44|54521|WD repeat domain 44##AY692226|DOCK11|139818|dedicator of cytokinesis 11##NM_144658|DOCK11|139818|dedicator of cytokinesis 11##BC015768|IL13RA1|3597|interleukin 13 receptor, alpha 1##NM_001560|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y10659|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81379|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81380|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK313467|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y09328|IL13RA1|3597|interleukin 13 receptor, alpha 1##BC009960|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ893454|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ896296|IL13RA1|3597|interleukin 13 receptor, alpha 1##AB209849|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK122676|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC036572|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC031241|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC057841|ZCCHC12|170261|zinc finger, CCHC domain containing 12##NM_173798|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC018066|ZCCHC12|170261|zinc finger, CCHC domain containing 12	0.201661	CTCF.p2:0:0.202
chr16	24592115	24592235	reg1030885.p2	4.796	+	BC029649 TSC_hg19_v1_chr16_+_24567629	-24547	+	AF063596 BC101139 BC101140 BC101141 BC101142 BC114353 BC114354 BC118667 BC139830 BC029352 BC063524 AB112074 AB112075 BX648661 TSC_hg19_v1_chr16_+_24552052	-40311	+	TSC_hg19_v1_chr16_+_24550886 NM_006910 NM_018703 NM_032626	-41282	+	TSC_hg19_v1_chr16_+_24741000 NM_014494	148823	+	AY035864 TSC_hg19_v1_chr16_+_24788680	196449	+	TSC_hg19_v1_chr16_+_24802422 AL833757	210306	+	BC029649|RBBP6|5930|retinoblastoma binding protein 6##AF063596|RBBP6|5930|retinoblastoma binding protein 6##BC101139|RBBP6|5930|retinoblastoma binding protein 6##BC101140|RBBP6|5930|retinoblastoma binding protein 6##BC101141|RBBP6|5930|retinoblastoma binding protein 6##BC101142|RBBP6|5930|retinoblastoma binding protein 6##BC114353|RBBP6|5930|retinoblastoma binding protein 6##BC114354|RBBP6|5930|retinoblastoma binding protein 6##BC118667|RBBP6|5930|retinoblastoma binding protein 6##BC139830|RBBP6|5930|retinoblastoma binding protein 6##BC029352|RBBP6|5930|retinoblastoma binding protein 6##BC063524|RBBP6|5930|retinoblastoma binding protein 6##AB112074|RBBP6|5930|retinoblastoma binding protein 6##AB112075|RBBP6|5930|retinoblastoma binding protein 6##BX648661|RBBP6|5930|retinoblastoma binding protein 6##NM_006910|RBBP6|5930|retinoblastoma binding protein 6##NM_018703|RBBP6|5930|retinoblastoma binding protein 6##NM_032626|RBBP6|5930|retinoblastoma binding protein 6##NM_014494|TNRC6A|27327|trinucleotide repeat containing 6A##AY035864|TNRC6A|27327|trinucleotide repeat containing 6A##AL833757|TNRC6A|27327|trinucleotide repeat containing 6A	0.668815	CTCF.p2:0:0.669
chr2	200838573	200838734	reg1030895.p2	4.796	+	TSC_hg19_v1_chr2_+_200820507 BC017959 CU676122	-18137	+	BX647677 NM_001039693	-18195	-	TSC_hg19_v1_chr2_-_200820204 HQ258367 AK298977 BC025758 AK095272 BC132835 BC136837 BC144420 BX648265 AK293064	-18441	-	NM_015535 AK290496	331956	+	AL110124 AY450394 AK090867 TSC_hg19_v1_chr2_+_201171276 NM_001100422 NM_001100424 AK002064 AK090703 AK314561 BC010848 BC018736 NM_001100423	332446	+	TSC_hg19_v1_chr2_+_201171424 AF193059 BC065817	332796	+	BC017959|C2orf47|79568|chromosome 2 open reading frame 47##BX647677|TYW5|129450|tRNA-yW synthesizing protein 5##NM_001039693|TYW5|129450|tRNA-yW synthesizing protein 5##HQ258367|TYW5|129450|tRNA-yW synthesizing protein 5##AK298977|TYW5|129450|tRNA-yW synthesizing protein 5##BC025758|TYW5|129450|tRNA-yW synthesizing protein 5##AK095272|TYW5|129450|tRNA-yW synthesizing protein 5##BC132835|TYW5|129450|tRNA-yW synthesizing protein 5##BC136837|TYW5|129450|tRNA-yW synthesizing protein 5##BC144420|TYW5|129450|tRNA-yW synthesizing protein 5##BX648265|TYW5|129450|tRNA-yW synthesizing protein 5##AK293064|TYW5|129450|tRNA-yW synthesizing protein 5##NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AF193059|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC065817|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	0.0	
chrX	131156227	131156341	reg1025294.p1	4.796	+	TSC_hg19_v1_chrX_-_130964633 AK097911	-191633	-	BC137050 AB529233 NM_001004486	-478286	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-732872	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	1037	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	1356	+	FJ717411 BC114371 AK125336 NM_194277	105676	-	AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4##FJ717411|FRMD7|90167|FERM domain containing 7##BC114371|FRMD7|90167|FERM domain containing 7##AK125336|FRMD7|90167|FERM domain containing 7##NM_194277|FRMD7|90167|FERM domain containing 7	0.06282	
chr18	18714938	18715069	reg1027540.p1	4.795	+	TSC_hg19_v1_chr18_-_18691765 AK057038 NM_005406	-23215	-	TSC_hg19_v1_chr18_-_18691640 AK307388	-23365	-	AF269088 NM_001145029 BC028407	-3966718	+	TSC_hg19_v1_chr18_+_18822192 AB051559 NM_001142966 BC125017	107240	+	TSC_hg19_v1_chr18_-_19180616 AB067498	465616	-	TSC_hg19_v1_chr18_-_19180666 NM_052911 AK096746	465675	-	AK057038|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##NM_005406|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AK307388|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AF269088|ANKRD30B|374860|ankyrin repeat domain 30B##NM_001145029|ANKRD30B|374860|ankyrin repeat domain 30B##BC028407|ANKRD30B|374860|ankyrin repeat domain 30B##AB051559|GREB1L|80000|growth regulation by estrogen in breast cancer-like##NM_001142966|GREB1L|80000|growth regulation by estrogen in breast cancer-like##BC125017|GREB1L|80000|growth regulation by estrogen in breast cancer-like##AB067498|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##NM_052911|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##AK096746|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)	0.557312	CTCF.p2:42:0.557
chr4	23336065	23336179	reg1029503.p2	4.795	+	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	-641530	+	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	-818568	-	NM_147182 TSC_hg19_v1_chr4_-_21950396	-1385738	-	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	555531	-	AF279891 TSC_hg19_v1_chr4_-_24586127	1249954	-	TSC_hg19_v1_chr4_-_24586154 AK303506 BC035974	1250038	-	BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##NM_147182|KCNIP4|80333|Kv channel interacting protein 4##AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.024544	
chr6	12289458	12289619	reg1001216.p1	4.795	+	NM_002114	-276815	+	NM_001143948 NM_032744	-510259	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-751040	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	1055	+	TSC_hg19_v1_chr6_+_12514301 D28417	224764	+	AK295263 TSC_hg19_v1_chr6_+_12716998	427405	+	NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1	0.0	
chr9	127054370	127054550	reg1029635.p2	4.795	+	TSC_hg19_v1_chr9_+_127054267 NM_001166170 NM_001166171	-201	+	TSC_hg19_v1_chr9_+_127020588 AL832574	-33870	+	TSC_hg19_v1_chr9_+_127020519 NM_001166168 AK313071	-33937	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	172	+	TSC_hg19_v1_chr9_+_127119114 BC042968	64709	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	123260	-	NM_001166170|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166171|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166168|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AK313071|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7	0.833537	CTCF.p2:66:0.769
chr11	60829161	60829261	reg1022050.p2	4.794	+	NM_006725 TSC_hg19_v1_chr11_+_60739236 AK128419 AK312749 BC078669 BC033755 X60992 AK292704 DQ786329 DQ786330 U66142 U66145 U66146	-89986	+	BC037974 BC025710 AF135600 AB020598 NM_016582	-110025	-	TSC_hg19_v1_chr11_+_60691945 NM_017870 NM_178031 AK000546 BC114569 BC032059	-137276	+	NM_014207 AY541703 TSC_hg19_v1_chr11_+_60869960 AK292698 X04391 BC027901 DQ892077 DQ895270	40768	+	BC141827 BC142702 AK097326 TSC_hg19_v1_chr11_-_60928910 NM_017966 AL834261 AK302384	99719	-	NM_001079807 AK301286 AK301293 AK301305 AK312941 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	141797	+	NM_006725|CD6|923|CD6 molecule##AK128419|CD6|923|CD6 molecule##AK312749|CD6|923|CD6 molecule##BC078669|CD6|923|CD6 molecule##BC033755|CD6|923|CD6 molecule##X60992|CD6|923|CD6 molecule##AK292704|CD6|923|CD6 molecule##DQ786329|CD6|923|CD6 molecule##DQ786330|CD6|923|CD6 molecule##U66142|CD6|923|CD6 molecule##U66145|CD6|923|CD6 molecule##U66146|CD6|923|CD6 molecule##BC037974|SLC15A3|51296|solute carrier family 15, member 3##BC025710|SLC15A3|51296|solute carrier family 15, member 3##AF135600|SLC15A3|51296|solute carrier family 15, member 3##AB020598|SLC15A3|51296|solute carrier family 15, member 3##NM_016582|SLC15A3|51296|solute carrier family 15, member 3##NM_017870|TMEM132A|54972|transmembrane protein 132A##NM_178031|TMEM132A|54972|transmembrane protein 132A##AK000546|TMEM132A|54972|transmembrane protein 132A##BC114569|TMEM132A|54972|transmembrane protein 132A##BC032059|TMEM132A|54972|transmembrane protein 132A##NM_014207|CD5|921|CD5 molecule##AY541703|CD5|921|CD5 molecule##AK292698|CD5|921|CD5 molecule##X04391|CD5|921|CD5 molecule##BC027901|CD5|921|CD5 molecule##DQ892077|CD5|921|CD5 molecule##DQ895270|CD5|921|CD5 molecule##BC141827|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##BC142702|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK097326|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_017966|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AL834261|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK302384|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_001079807|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301286|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301293|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)	0.0	
chr12	46156441	46156565	reg1031857.p1	4.794	+	TSC_hg19_v1_chr12_+_46123498 AB527360 AY727870 DQ096628 NM_152641 CR749833	-32906	+	TSC_hg19_v1_chr12_+_46123488 AK127872	-33020	+	TSC_hg19_v1_chr12_-_46121531 BC047417	-34973	-	AB463286 TSC_hg19_v1_chr12_-_46357972	201457	-	BC017851 TSC_hg19_v1_chr12_-_46384277	227750	-	TSC_hg19_v1_chr12_-_46384319 AK302999	227822	-	AY727870|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##DQ096628|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##NM_152641|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##CR749833|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##AK127872|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##BC047417|LOC400027|400027|uncharacterized LOC400027##BC017851|SCAF11|9169|SR-related CTD-associated factor 11##AK302999|SCAF11|9169|SR-related CTD-associated factor 11	0.977401	CTCF.p2:-8:0.977
chr19	15202807	15202913	reg1026685.p1	4.794	+	BC140930 AB529304 NM_001004713	-5027	+	EU502748 AK313992 NM_012114	-42618	+	AK097684 NM_173482 BC035678	-81314	+	TSC_hg19_v1_chr19_+_15218213 AK123686 NM_033025 AK315453 BC029926 CU688794	15331	+	BC126913 CU680024 CU680048 TSC_hg19_v1_chr19_-_15235944	32986	-	BC000109 TSC_hg19_v1_chr19_-_15236004	33128	-	BC140930|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1##NM_001004713|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1##EU502748|CASP14|23581|caspase 14, apoptosis-related cysteine peptidase##AK313992|CASP14|23581|caspase 14, apoptosis-related cysteine peptidase##NM_012114|CASP14|23581|caspase 14, apoptosis-related cysteine peptidase##AK097684|CCDC105|126402|coiled-coil domain containing 105##NM_173482|CCDC105|126402|coiled-coil domain containing 105##BC035678|CCDC105|126402|coiled-coil domain containing 105##AK123686|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)##NM_033025|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)##AK315453|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)##BC029926|SYDE1|85360|synapse defective 1, Rho GTPase, homolog 1 (C. elegans)##BC126913|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC000109|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like	0.99954	CTCF.p2:-1:1.000
chr3	3188430	3188551	reg1030157.p2	4.794	+	NM_182916 TSC_hg19_v1_chr3_+_3168634 AK290411 BC005184 AL834397 BC012537 AB063105 AF151805 AK124137	-19839	+	AK304256 NM_000564 NM_001243099 NM_175724 NM_175725 NM_175726 NM_175727 NM_175728	-36433	-	NM_001206956 NM_175613 AK057278 AK314396 BC026119	-254581	+	TSC_hg19_v1_chr3_-_3221376 AF117230 CU675978 CU688352 AK058191 BC059171 CR627060 AK027507 AK312577 BC017419 BC067811	32882	-	TSC_hg19_v1_chr3_-_3221386 AK301423	32896	-	TSC_hg19_v1_chr3_-_3221401 NM_001173482 NM_016302	32911	-	NM_182916|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AK290411|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC005184|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AL834397|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC012537|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AB063105|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AF151805|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AK304256|IL5RA|3568|interleukin 5 receptor, alpha##NM_000564|IL5RA|3568|interleukin 5 receptor, alpha##NM_001243099|IL5RA|3568|interleukin 5 receptor, alpha##NM_175724|IL5RA|3568|interleukin 5 receptor, alpha##NM_175725|IL5RA|3568|interleukin 5 receptor, alpha##NM_175726|IL5RA|3568|interleukin 5 receptor, alpha##NM_175727|IL5RA|3568|interleukin 5 receptor, alpha##NM_175728|IL5RA|3568|interleukin 5 receptor, alpha##NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4##AF117230|CRBN|51185|cereblon##AK058191|CRBN|51185|cereblon##BC059171|CRBN|51185|cereblon##CR627060|CRBN|51185|cereblon##AK027507|CRBN|51185|cereblon##AK312577|CRBN|51185|cereblon##BC017419|CRBN|51185|cereblon##BC067811|CRBN|51185|cereblon##AK301423|CRBN|51185|cereblon##NM_001173482|CRBN|51185|cereblon##NM_016302|CRBN|51185|cereblon	0.0	
chr15	100042452	100042628	reg1028477.p1	4.793	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-250898	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-251124	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-252834	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	63613	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	63654	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	63695	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.0	
chr17	40171950	40172130	reg1027579.p2	4.793	+	BX647209 NM_003315	-2348	-	TSC_hg19_v1_chr17_+_40169593 NM_001001349	-2446	+	TSC_hg19_v1_chr17_-_40169447 BC033772	-2592	-	NM_001144927 NM_001144928 NM_001144929 NM_017595 TSC_hg19_v1_chr17_+_40172107	58	+	TSC_hg19_v1_chr17_+_40172124 AK027265 AK297975 AK054571 BC007316 BC007450	106	+	NM_001242704	18003	-	BX647209|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7##NM_003315|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7##NM_001001349|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC033772|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7##NM_001144927|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144928|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144929|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_017595|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK027265|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK297975|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK054571|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007316|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007450|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001242704|ZNF385C|201181|zinc finger protein 385C	0.0	
chr2	113384400	113384581	reg1000643.p2	4.793	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-42301	+	TSC_hg19_v1_chr2_+_113342023 AK024631 BC004498 NM_032309 AK312219	-42452	+	BX647360 BC110833 BC150139 AK294027 TSC_hg19_v1_chr2_+_113300041 AK001678 AK301178 AK022533 BX647683	-84571	+	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	19030	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	137732	-	NM_000575 BC035169	158482	-	AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BC004498|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_032309|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##AK312219|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##BX647360|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BC110833|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BC150139|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK294027|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK001678|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK301178|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##AK022533|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##BX647683|POLR1B|84172|polymerase (RNA) I polypeptide B, 128kDa##NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha	0.0	
chr7	13782516	13782612	reg1029174.p1	4.793	+	TSC_hg19_v1_chr7_+_12727257 AK313233 U73960	-1055318	+	NM_001195396 NM_005738	-1055654	+	TSC_hg19_v1_chr7_+_12726499 NM_001037164 NM_212460 BC039123 BC001111 BC003027	-1056078	+	AK293802 AK311134 AK311194 CR627389 AK294572 AK311707 AK316007 AK299693 NM_001163150 NM_001163151 NM_001163152	243418	-	TSC_hg19_v1_chr7_-_14029292 AB209202 BC098403 AK312863	246740	-	NM_001163147 NM_004956	247077	-	AK313233|ARL4A|10124|ADP-ribosylation factor-like 4A##U73960|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_001195396|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_005738|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_001037164|ARL4A|10124|ADP-ribosylation factor-like 4A##NM_212460|ARL4A|10124|ADP-ribosylation factor-like 4A##BC039123|ARL4A|10124|ADP-ribosylation factor-like 4A##BC001111|ARL4A|10124|ADP-ribosylation factor-like 4A##BC003027|ARL4A|10124|ADP-ribosylation factor-like 4A##AK293802|ETV1|2115|ets variant 1##AK311134|ETV1|2115|ets variant 1##AK311194|ETV1|2115|ets variant 1##CR627389|ETV1|2115|ets variant 1##AK294572|ETV1|2115|ets variant 1##AK311707|ETV1|2115|ets variant 1##AK316007|ETV1|2115|ets variant 1##AK299693|ETV1|2115|ets variant 1##NM_001163150|ETV1|2115|ets variant 1##NM_001163151|ETV1|2115|ets variant 1##NM_001163152|ETV1|2115|ets variant 1##AB209202|ETV1|2115|ets variant 1##BC098403|ETV1|2115|ets variant 1##AK312863|ETV1|2115|ets variant 1##NM_001163147|ETV1|2115|ets variant 1##NM_004956|ETV1|2115|ets variant 1	0.731298	CTCF.p2:-5:0.731
chr7	30436163	30436318	reg1030938.p2	4.793	+	TSC_hg19_v1_chr7_+_30324634 AY054122	-111584	+	TSC_hg19_v1_chr7_+_30324515 AF527533	-111691	+	AF513707 NM_147128	-112318	+	AY128682 AY128683 AY128684 AY128685 AY128686 AF113925 BC040339 AK300367 AK023969 NM_006092	82081	-	CU674304 TSC_hg19_v1_chr7_-_30544445 BC013937 BC005356 AK315608 BC019243 BC000625 NM_001199815 NM_001199816 NM_001199817 NM_024051	108161	-	NM_002047	197940	+	AY054122|ZNRF2|223082|zinc and ring finger 2##AF527533|ZNRF2|223082|zinc and ring finger 2##AF513707|ZNRF2|223082|zinc and ring finger 2##NM_147128|ZNRF2|223082|zinc and ring finger 2##AY128682|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128683|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128684|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128685|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128686|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AF113925|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC040339|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK300367|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK023969|NOD1|10392|nucleotide-binding oligomerization domain containing 1##NM_006092|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC013937|GGCT|79017|gamma-glutamylcyclotransferase##BC005356|GGCT|79017|gamma-glutamylcyclotransferase##AK315608|GGCT|79017|gamma-glutamylcyclotransferase##BC019243|GGCT|79017|gamma-glutamylcyclotransferase##BC000625|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199815|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199816|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199817|GGCT|79017|gamma-glutamylcyclotransferase##NM_024051|GGCT|79017|gamma-glutamylcyclotransferase##NM_002047|GARS|2617|glycyl-tRNA synthetase	0.017868	
chr10	84694295	84694403	reg1030234.p1	4.792	+	DQ857894 NM_001165973	-1056907	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-1059267	+	AK123978 NM_001145719	-2393775	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	1204908	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	1237443	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	1239210	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.020465	
chr16	475204	475384	reg1029448.p1	4.792	+	TSC_hg19_v1_chr16_+_451944 AJ293009 CU679809	-23347	+	TSC_hg19_v1_chr16_+_451884 AK055839 NM_020664 BC010740 AK128012 AK225961 BC030226	-23410	+	TSC_hg19_v1_chr16_+_447198 BC017067 NM_005009 BC004880 Y07604 AB528678 BT019438	-28083	+	TSC_hg19_v1_chr16_+_475616 AB014565 AF395731	321	+	TSC_hg19_v1_chr16_+_475648 BC051360 NM_014700	358	+	TSC_hg19_v1_chr16_+_524843 AK303061 NM_001142272	49555	+	AJ293009|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##AK055839|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##NM_020664|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##BC010740|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##AK128012|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##AK225961|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##BC030226|DECR2|26063|2,4-dienoyl CoA reductase 2, peroxisomal##BC017067|NME4|4833|non-metastatic cells 4, protein expressed in##NM_005009|NME4|4833|non-metastatic cells 4, protein expressed in##BC004880|NME4|4833|non-metastatic cells 4, protein expressed in##Y07604|NME4|4833|non-metastatic cells 4, protein expressed in##BT019438|NME4|4833|non-metastatic cells 4, protein expressed in##AB014565|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##AF395731|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##BC051360|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##NM_014700|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##AK303061|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##NM_001142272|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)	0.0	
chr2	137013781	137013919	reg1027658.p2	4.792	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-138174	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-140052	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-270634	-	TSC_hg19_v1_chr2_+_137523114 AK299929	509266	+	NM_001080427	734611	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1708084	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.021405	
chr9	16648819	16648905	reg1026835.p2	4.792	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-1095841	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-1137902	-	AF098483 AF098482 NM_021144	-1138615	-	TSC_hg19_v1_chr9_-_16727889 AY438376	79035	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	221805	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	221904	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.020189	
chr10	64977118	64977286	reg1005709.p2	4.791	+	TSC_hg19_v1_chr10_+_64893098 AF267866 AK301656 AK225257 AK225256 AY267839 AY267840 BC011707 AB590768 EU832288 EU832373	-84056	+	TSC_hg19_v1_chr10_+_64893044 NM_030759 AK054957 AL136656	-84171	+	AK312813 NM_001136178	-398276	-	BC126403 BC143722 TSC_hg19_v1_chr10_-_65029004 BX537954 NM_004241 BC108649	51713	-	TSC_hg19_v1_chr10_+_65224979 BC007866 AK314171	247782	+	AK027280 EF068222 NM_032776 TSC_hg19_v1_chr10_-_65225738	248476	-	AF267866|NRBF2|29982|nuclear receptor binding factor 2##AK301656|NRBF2|29982|nuclear receptor binding factor 2##AK225257|NRBF2|29982|nuclear receptor binding factor 2##AK225256|NRBF2|29982|nuclear receptor binding factor 2##AY267839|NRBF2|29982|nuclear receptor binding factor 2##AY267840|NRBF2|29982|nuclear receptor binding factor 2##BC011707|NRBF2|29982|nuclear receptor binding factor 2##EU832288|NRBF2|29982|nuclear receptor binding factor 2##EU832373|NRBF2|29982|nuclear receptor binding factor 2##NM_030759|NRBF2|29982|nuclear receptor binding factor 2##AK054957|NRBF2|29982|nuclear receptor binding factor 2##AL136656|NRBF2|29982|nuclear receptor binding factor 2##AK312813|EGR2|1959|early growth response 2##NM_001136178|EGR2|1959|early growth response 2##BC126403|JMJD1C|221037|jumonji domain containing 1C##BC143722|JMJD1C|221037|jumonji domain containing 1C##BX537954|JMJD1C|221037|jumonji domain containing 1C##NM_004241|JMJD1C|221037|jumonji domain containing 1C##BC108649|JMJD1C|221037|jumonji domain containing 1C##BC007866|LOC84989|84989|uncharacterized LOC84989##AK314171|LOC84989|84989|uncharacterized LOC84989##AK027280|JMJD1C|221037|jumonji domain containing 1C##EF068222|JMJD1C|221037|jumonji domain containing 1C##NM_032776|JMJD1C|221037|jumonji domain containing 1C	0.0	
chr10	91461220	91461400	reg1027757.p2	4.791	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-55986	-	TSC_hg19_v1_chr10_-_91404973 AK125428	-56367	-	AF355198 AY027662 AY027663 NM_138316 NM_148978	-57672	-	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	65	+	TSC_hg19_v1_chr10_+_91498725 AK025628	37457	+	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	1156136	-	AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AK125428|PANK1|53354|pantothenate kinase 1##AF355198|PANK1|53354|pantothenate kinase 1##AY027662|PANK1|53354|pantothenate kinase 1##AY027663|PANK1|53354|pantothenate kinase 1##NM_138316|PANK1|53354|pantothenate kinase 1##NM_148978|PANK1|53354|pantothenate kinase 1##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AK025628|KIF20B|9585|kinesin family member 20B##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)	0.0	
chr1	181455148	181455319	reg1030244.p2	4.791	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-2533	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-397368	+	NM_016545	-397596	+	BC137223 BC137224 AK128654 NM_001009992	575564	-	TSC_hg19_v1_chr1_-_182354649 AK301600	899449	-	TSC_hg19_v1_chr1_-_182357758 BC127883	902530	-	NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase	0.0	
chr19	55128431	55128610	reg1027098.p1	4.791	+	BC047007 AK290919 AK311226 AF025530 NM_006863 BC032238 BC063009 AF025529	-23435	+	TSC_hg19_v1_chr19_+_55085279 U70665 BC017412 AK222651 AF025531 U82276 BC027916 EU915609 EU915610 CU675976 AF041034 U82277 U82278	-43211	+	TSC_hg19_v1_chr19_+_55085256 NM_001130917 NM_006866 U82275 AK130170	-43268	+	AK311555 BC015731 NM_006669 AK292028	117	+	NM_001081638 NM_001081639 TSC_hg19_v1_chr19_+_55141934 AK223310 AF283984 AF004230 NM_001081637 AF283985	13447	+	NM_001081438 NM_006847	45603	+	BC047007|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AK290919|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AK311226|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AF025530|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##NM_006863|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##BC032238|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##BC063009|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AF025529|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##U70665|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC017412|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AK222651|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AF025531|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82276|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC027916|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##EU915609|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##EU915610|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82277|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82278|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_001130917|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_006866|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82275|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AK130170|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC015731|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_006669|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AK292028|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081638|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081639|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AK223310|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AF283984|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081637|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AF283985|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081438|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##NM_006847|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4	0.0	
chr3	42039520	42039663	reg1031127.p1	4.791	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	-36032	-	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	-798567	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	-798642	+	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	93242	+	TSC_hg19_v1_chr3_+_42190749 AK294221	151157	+	AL713787 TSC_hg19_v1_chr3_+_42190865	151256	+	BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1	0.0	
chr15	67394507	67394687	reg1022805.p1	4.790	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	-36196	+	TSC_hg19_v1_chr15_+_67358179 AK290881	-36422	+	NM_001142861 U59914	-393668	+	NM_001145102 AK316017	23526	+	AK298139 NM_001145103	35761	+	NM_001145104 AK300614 AK301348	63899	+	NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##AK290881|SMAD3|4088|SMAD family member 3##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3##AK298139|SMAD3|4088|SMAD family member 3##NM_001145103|SMAD3|4088|SMAD family member 3##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3	0.0	
chr19	30019494	30019615	reg1009976.p2	4.790	+	NM_001146339	-2064	+	TSC_hg19_v1_chr19_-_29704107 NM_006003	-315433	-	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	-315494	-	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	77635	+	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	136795	+	TSC_hg19_v1_chr19_+_30156375 AK225814	136867	+	NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1	0.0	
chr2	114477891	114478001	reg1029379.p2	4.790	+	TSC_hg19_v1_chr2_+_114384849 AK289496 AF095350 AF095351 BC126129 BC144050 BC144052	-93040	+	TSC_hg19_v1_chr2_+_114384811 BC111008 NM_007082 NM_013412	-93132	+	TSC_hg19_v1_chr2_-_114384648 BC000596 BC105600	-93298	-	AF529364 CU676258 TSC_hg19_v1_chr2_-_114514079 AY358620	36132	-	AK025657 AK315719 TSC_hg19_v1_chr2_-_114514220 BC050096 BC018537 NM_025181	36351	-	TSC_hg19_v1_chr2_+_114647549 BC044590 NM_005721 AF127773	169601	+	AK289496|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095350|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095351|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC126129|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144050|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144052|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC111008|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##NM_007082|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##NM_013412|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC000596|RPL23AP7|118433|ribosomal protein L23a pseudogene 7##BC105600|RPL23AP7|118433|ribosomal protein L23a pseudogene 7##AF529364|SLC35F5|80255|solute carrier family 35, member F5##AY358620|SLC35F5|80255|solute carrier family 35, member F5##AK025657|SLC35F5|80255|solute carrier family 35, member F5##AK315719|SLC35F5|80255|solute carrier family 35, member F5##BC050096|SLC35F5|80255|solute carrier family 35, member F5##BC018537|SLC35F5|80255|solute carrier family 35, member F5##NM_025181|SLC35F5|80255|solute carrier family 35, member F5##BC044590|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##NM_005721|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AF127773|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	0.413938	CTCF.p2:2:0.414
chr7	62476151	62476274	reg1028667.p2	4.790	+	AK131575 NM_001159279	-4966330	+	AF277624 NM_033273	-5268642	-	Y10275 TSC_hg19_v1_chr7_-_56184079 BC043523 NM_001145712	-6292169	-	NM_001159522	1029608	+	NM_001159524	1191368	+	BC033523 NM_153363	1212639	+	AK131575|ZNF716|441234|zinc finger protein 716##NM_001159279|ZNF716|441234|zinc finger protein 716##AF277624|ZNF479|90827|zinc finger protein 479##NM_033273|ZNF479|90827|zinc finger protein 479##BC043523|LOC389493|389493|uncharacterized protein LOC389493##NM_001145712|LOC389493|389493|uncharacterized protein LOC389493##NM_001159522|ZNF727|442319|zinc finger protein 727##NM_001159524|ZNF735|730291|zinc finger protein 735##BC033523|ZNF679|168417|zinc finger protein 679##NM_153363|ZNF679|168417|zinc finger protein 679	0.944583	CTCF.p2:-3:0.945
chr8	36932883	36932974	reg1026516.p1	4.790	+	NM_001031836 AK302391 BC028701	-291058	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-1839941	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-3475433	-	TSC_hg19_v1_chr8_-_37457377 AK025743	524440	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	620389	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	661178	+	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2	0.335726	CTCF.p2:42:0.336
chr8	91513708	91513809	reg1028495.p2	4.790	+	AB529128 X06661 BC006478 AK054881 AK312491 BC020864 NM_004929	-418743	-	NM_001359 BC105080 BC105082 BC143669 TSC_hg19_v1_chr8_+_91013704 AK300069 L26050	-500109	+	TSC_hg19_v1_chr8_-_90996896 AK001017 AK289848 BC071590 BC040519 BX640816 NM_002485 AK312410	-516854	-	AK300583 AK123958 AL834364 TSC_hg19_v1_chr8_-_91657856	144040	-	TSC_hg19_v1_chr8_-_91657970 AY147881 NM_001008495 NM_001146273	144257	-	AF414126 TSC_hg19_v1_chr8_+_91803956 NM_022351 AK095533 BC068448 AY224210	290187	+	X06661|CALB1|793|calbindin 1, 28kDa##BC006478|CALB1|793|calbindin 1, 28kDa##AK054881|CALB1|793|calbindin 1, 28kDa##AK312491|CALB1|793|calbindin 1, 28kDa##BC020864|CALB1|793|calbindin 1, 28kDa##NM_004929|CALB1|793|calbindin 1, 28kDa##NM_001359|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105080|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105082|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC143669|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK300069|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##L26050|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK001017|NBN|4683|nibrin##AK289848|NBN|4683|nibrin##BC071590|NBN|4683|nibrin##BC040519|NBN|4683|nibrin##BX640816|NBN|4683|nibrin##NM_002485|NBN|4683|nibrin##AK312410|NBN|4683|nibrin##AK300583|TMEM64|169200|transmembrane protein 64##AK123958|TMEM64|169200|transmembrane protein 64##AL834364|TMEM64|169200|transmembrane protein 64##AY147881|TMEM64|169200|transmembrane protein 64##NM_001008495|TMEM64|169200|transmembrane protein 64##NM_001146273|TMEM64|169200|transmembrane protein 64##AF414126|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##NM_022351|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AK095533|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##BC068448|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AY224210|NECAB1|64168|N-terminal EF-hand calcium binding protein 1	0.987894	CTCF.p2:-2:0.988
chr11	67035883	67036049	reg1029167.p2	4.789	+	TSC_hg19_v1_chr11_+_67034167 CU691526 DQ891148 DQ894328	-1793	+	TSC_hg19_v1_chr11_+_67034155 M80776	-1813	+	TSC_hg19_v1_chr11_+_67033929 BC037963 BC090863	-2032	+	NM_207354 TSC_hg19_v1_chr11_+_67056786 BC110419	20808	+	TSC_hg19_v1_chr11_+_67056815 AK124721 AK096277 AK126438	20877	+	NM_017857 TSC_hg19_v1_chr11_+_67070955 AK000522	34975	+	DQ891148|ADRBK1|156|adrenergic, beta, receptor kinase 1##DQ894328|ADRBK1|156|adrenergic, beta, receptor kinase 1##M80776|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC037963|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC090863|ADRBK1|156|adrenergic, beta, receptor kinase 1##NM_207354|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##BC110419|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK124721|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK096277|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK126438|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##NM_017857|SSH3|54961|slingshot homolog 3 (Drosophila)##AK000522|SSH3|54961|slingshot homolog 3 (Drosophila)	0.031845	
chr1	185689892	185690053	reg1035239.p1	4.789	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-403502	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-403653	-	TSC_hg19_v1_chr1_+_185126418 AK291443	-563576	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	13604	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	575435	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	654285	-	NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)	0.999196	CTCF.p2:-1:0.999
chr12	15737005	15737077	reg1002450.p1	4.789	+	TSC_hg19_v1_chr12_+_15699551 AK290982	-37464	+	NM_030668 NM_030669 NM_030670 NM_030671 AF152378 AF187042 AF187043 AF187044	-37760	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	-261490	+	TSC_hg19_v1_chr12_-_15815073 AK316134	78099	-	TSC_hg19_v1_chr12_-_15865848 AK292931	128823	-	TSC_hg19_v1_chr12_-_15942323 U12535 BC005836 AK291777 BC030010	205191	-	AK290982|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK316134|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK292931|EPS8|2059|epidermal growth factor receptor pathway substrate 8##U12535|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC005836|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK291777|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC030010|EPS8|2059|epidermal growth factor receptor pathway substrate 8	0.0	
chr14	24766950	24767042	reg1001181.p2	4.789	+	TSC_hg19_v1_chr14_-_24740802 NM_182836	-26199	-	TSC_hg19_v1_chr14_-_24740785 AK291347	-26213	-	TSC_hg19_v1_chr14_-_24740748 NM_004581 BC003093	-26238	-	AK058159 NM_138452	1669	-	BC015943 AL833917 BC014057 TSC_hg19_v1_chr14_-_24768965 BX247980 AF418205 NM_001136050	1943	-	TSC_hg19_v1_chr14_+_24769078 AB095941 BC025332 BX647311 BX248018 NM_174913	2091	+	NM_182836|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##AK291347|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##NM_004581|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##BC003093|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##AK058159|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##NM_138452|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##BC015943|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##AL833917|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##BC014057|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##BX247980|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##AF418205|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##NM_001136050|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##AB095941|C14orf21|161424|chromosome 14 open reading frame 21##BC025332|C14orf21|161424|chromosome 14 open reading frame 21##BX647311|C14orf21|161424|chromosome 14 open reading frame 21##BX248018|C14orf21|161424|chromosome 14 open reading frame 21##NM_174913|C14orf21|161424|chromosome 14 open reading frame 21	0.918484	CTCF.p2:6:0.918
chr17	62151825	62151940	reg1029325.p2	4.789	+	TSC_hg19_v1_chr17_-_62097985 AK295382 AK309953 NM_001099786 NM_001099787 NM_001099788 NM_001099789	-53900	-	NM_000873 TSC_hg19_v1_chr17_-_62084314	-67577	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	-76120	+	TSC_hg19_v1_chr17_-_62207401 AB385116 BC130405 BC130407	55516	-	AF059198 AB209869 TSC_hg19_v1_chr17_-_62207502 NM_001433 AK292403	55634	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	188704	-	AK295382|ICAM2|3384|intercellular adhesion molecule 2##NM_001099786|ICAM2|3384|intercellular adhesion molecule 2##NM_001099787|ICAM2|3384|intercellular adhesion molecule 2##NM_001099788|ICAM2|3384|intercellular adhesion molecule 2##NM_001099789|ICAM2|3384|intercellular adhesion molecule 2##NM_000873|ICAM2|3384|intercellular adhesion molecule 2##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##BC130405|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130407|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AF059198|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AB209869|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##NM_001433|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK292403|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2	0.0	
chr5	10522297	10522363	reg1036653.p1	4.789	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-80178	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-80327	+	TSC_hg19_v1_chr5_+_10354003 AB385356	-168322	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	42112	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	238929	-	TSC_hg19_v1_chr5_-_10761341 BC002726	239012	-	AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein	0.0	
chr7	135099731	135099843	reg1028462.p1	4.789	+	AB464251 AF513502 NM_182489	-183057	+	TSC_hg19_v1_chr7_-_134896270 AK001606 BX640957 NM_014149	-203496	-	TSC_hg19_v1_chr7_-_134896267 AF161534 AK022935	-203525	-	BC035590 U71267 U71268 AL389980 TSC_hg19_v1_chr7_-_135194851 AK314540 AK074493 AK300365 NM_001008225 NM_001190847 NM_001190848 NM_001190849 NM_001190850 NM_013316	95073	-	TSC_hg19_v1_chr7_+_135242675 NM_015135 BC136624 AK297307 BC146784 D86978	142901	+	TSC_hg19_v1_chr7_+_135347230 NM_001130929 BC063529 BC073942 BC021734 BC107765 BC047474 BC016741 BC040872	247474	+	AB464251|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AF513502|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##NM_182489|STRA8|346673|stimulated by retinoic acid gene 8 homolog (mouse)##AK001606|WDR91|29062|WD repeat domain 91##BX640957|WDR91|29062|WD repeat domain 91##NM_014149|WDR91|29062|WD repeat domain 91##AF161534|WDR91|29062|WD repeat domain 91##AK022935|WDR91|29062|WD repeat domain 91##BC035590|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71267|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71268|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AL389980|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK314540|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK074493|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK300365|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001008225|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190847|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190848|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190849|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190850|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_013316|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_015135|NUP205|23165|nucleoporin 205kDa##BC136624|NUP205|23165|nucleoporin 205kDa##AK297307|NUP205|23165|nucleoporin 205kDa##BC146784|NUP205|23165|nucleoporin 205kDa##D86978|NUP205|23165|nucleoporin 205kDa##NM_001130929|C7orf73|647087|chromosome 7 open reading frame 73##BC063529|C7orf73|647087|chromosome 7 open reading frame 73##BC073942|C7orf73|647087|chromosome 7 open reading frame 73##BC021734|C7orf73|647087|chromosome 7 open reading frame 73##BC107765|C7orf73|647087|chromosome 7 open reading frame 73##BC047474|C7orf73|647087|chromosome 7 open reading frame 73##BC016741|C7orf73|647087|chromosome 7 open reading frame 73##BC040872|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4	0.479624	CTCF.p2:7:0.480
chr10	74032732	74032867	reg1020402.p1	4.788	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-56688	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-57011	+	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	-57035	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	1025	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	81879	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	82127	-	AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	0.0	
chr1	206976541	206976722	reg1021155.p1	4.788	+	AY040367 NM_153758 AB463800	-4405	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-30752	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-118160	+	AF453946 NM_013371	25590	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	62544	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	94169	+	AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24	0.0	
chr12	2791829	2791925	reg1018757.p1	4.788	+	AB209016 AJ224873 AY830711 AY830712 AY830713 Z34809 Z34810 Z34811 Z34812 Z34813 Z34814 Z34815 Z34816 Z34817 Z34818 Z34819 Z34820 Z34821 Z34822 Z74996 TSC_hg19_v1_chr12_+_2162753	-629149	+	TSC_hg19_v1_chr12_+_2162452 NM_000719 NM_001129827 NM_001129829 NM_001129830 NM_001129831 NM_001129832 NM_001129833 NM_001129834 NM_001129835 NM_001129836 NM_001129837 NM_001129838 NM_001129839 NM_001129840 NM_001129841 NM_001129842 NM_001129843 NM_001129844 NM_001129846 NM_001167623 NM_001167624 NM_001167625 NM_199460 AK309111 AF465484 AK308652 BC146846	-629383	+	TSC_hg19_v1_chr12_-_2113622 AB463561 AK301109 AK056200 AK299203 BC043437 AY146652 NM_152640	-678206	-	TSC_hg19_v1_chr12_+_2904161 NM_002014 AK313918 BC001786 M88279 BC007924	112277	+	TSC_hg19_v1_chr12_+_2904310 AB385011 CU674888 DQ893668 DQ895800	112425	+	NM_018463 TSC_hg19_v1_chr12_+_2921842 AK130319 AK297189 AK291110 AK300905 AK027483 BC006552 BC013399 DQ892711 DQ895963 CU675449 AY599883	129979	+	AB209016|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AJ224873|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830711|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830712|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830713|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34809|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34810|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34811|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34812|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34813|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34814|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34815|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34816|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34817|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34818|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34819|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34820|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34821|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34822|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z74996|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK301109|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK056200|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK299203|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC043437|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AY146652|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_152640|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_002014|FKBP4|2288|FK506 binding protein 4, 59kDa##AK313918|FKBP4|2288|FK506 binding protein 4, 59kDa##BC001786|FKBP4|2288|FK506 binding protein 4, 59kDa##M88279|FKBP4|2288|FK506 binding protein 4, 59kDa##BC007924|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ893668|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ895800|FKBP4|2288|FK506 binding protein 4, 59kDa##NM_018463|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK130319|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK297189|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK291110|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK300905|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK027483|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC006552|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC013399|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ892711|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ895963|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AY599883|ITFG2|55846|integrin alpha FG-GAP repeat containing 2	0.896894	CTCF.p2:-14:0.897
chr12	56441028	56441148	reg1028577.p2	4.788	+	NM_001029 BC002604	-5385	+	NM_022465 AK122880	-26329	+	TSC_hg19_v1_chr12_+_56391069 NM_000456 NM_001032386 NM_001032387 AK312763 AK309669	-50019	+	NM_001982 M34309 NM_001005915 TSC_hg19_v1_chr12_+_56473925	32779	+	TSC_hg19_v1_chr12_+_56473948 AK300909 AK294719 AK291681 BC082992 M29366 S61953 BC002706 CU678138 BT007226	32926	+	NM_006191	57014	+	NM_001029|RPS26|6231|ribosomal protein S26##BC002604|RPS26|6231|ribosomal protein S26##NM_022465|IKZF4|64375|IKAROS family zinc finger 4 (Eos)##AK122880|IKZF4|64375|IKAROS family zinc finger 4 (Eos)##NM_000456|SUOX|6821|sulfite oxidase##NM_001032386|SUOX|6821|sulfite oxidase##NM_001032387|SUOX|6821|sulfite oxidase##AK312763|SUOX|6821|sulfite oxidase##NM_001982|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##M34309|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##NM_001005915|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##AK300909|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##AK294719|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##AK291681|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##BC082992|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##M29366|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##S61953|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##BC002706|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##BT007226|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##NM_006191|PA2G4|5036|proliferation-associated 2G4, 38kDa	0.0	
chr14	106026356	106026537	reg1007485.p4	4.788	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-33505	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-68810	+	BX248038 NM_001134877	-69927	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	65890	-	BC040042 TSC_hg19_v1_chr14_-_106110945	84477	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	84670	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.0	
chr17	76170737	76170857	reg1023481.p2	4.788	+	TSC_hg19_v1_chr17_+_76164661 AJ002308 AY358916 NM_004710 BC000407 BC105992 BC029755 DQ891832 DQ895019	-6137	+	AY358510 NM_001163075	-28364	+	BC023597 NM_007267 TSC_hg19_v1_chr17_-_76128499	-42297	-	AB451268 AB451395 BT006941 AB591021 BC007872 BC007986 BC006484 AK314950 K02581 TSC_hg19_v1_chr17_-_76183133 NM_003258	12382	-	BC132824 NM_001010982 NM_001145526 TSC_hg19_v1_chr17_+_76183442 BC020920 BC142973 BX647783 BX648442 EU832465 EU832546 HQ258157	12626	+	NM_001012270 NM_001012271 NM_001168 TSC_hg19_v1_chr17_+_76210320 AK301793	39502	+	AJ002308|SYNGR2|9144|synaptogyrin 2##AY358916|SYNGR2|9144|synaptogyrin 2##NM_004710|SYNGR2|9144|synaptogyrin 2##BC000407|SYNGR2|9144|synaptogyrin 2##BC105992|SYNGR2|9144|synaptogyrin 2##BC029755|SYNGR2|9144|synaptogyrin 2##DQ891832|SYNGR2|9144|synaptogyrin 2##DQ895019|SYNGR2|9144|synaptogyrin 2##AY358510|C17orf99|100141515|chromosome 17 open reading frame 99##NM_001163075|C17orf99|100141515|chromosome 17 open reading frame 99##BC023597|TMC6|11322|transmembrane channel-like 6##NM_007267|TMC6|11322|transmembrane channel-like 6##AB451268|TK1|7083|thymidine kinase 1, soluble##AB451395|TK1|7083|thymidine kinase 1, soluble##BT006941|TK1|7083|thymidine kinase 1, soluble##BC007872|TK1|7083|thymidine kinase 1, soluble##BC007986|TK1|7083|thymidine kinase 1, soluble##BC006484|TK1|7083|thymidine kinase 1, soluble##AK314950|TK1|7083|thymidine kinase 1, soluble##K02581|TK1|7083|thymidine kinase 1, soluble##NM_003258|TK1|7083|thymidine kinase 1, soluble##BC132824|AFMID|125061|arylformamidase##NM_001010982|AFMID|125061|arylformamidase##NM_001145526|AFMID|125061|arylformamidase##BC020920|AFMID|125061|arylformamidase##BC142973|AFMID|125061|arylformamidase##BX648442|AFMID|125061|arylformamidase##EU832465|AFMID|125061|arylformamidase##EU832546|AFMID|125061|arylformamidase##HQ258157|AFMID|125061|arylformamidase##NM_001012270|BIRC5|332|baculoviral IAP repeat containing 5##NM_001012271|BIRC5|332|baculoviral IAP repeat containing 5##NM_001168|BIRC5|332|baculoviral IAP repeat containing 5##AK301793|BIRC5|332|baculoviral IAP repeat containing 5	0.810411	CTCF.p2:0:0.810
chr18	34337200	34337334	reg1029681.p1	4.788	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	-459553	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-569791	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-627379	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	71496	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	71627	-	AB073382 TSC_hg19_v1_chr18_-_34408948	71685	-	AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.984057	CTCF.p2:8:0.984
chr5	113559738	113559866	reg1028778.p1	4.788	+	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	-710406	+	AK128596 NM_001085377	-735276	-	AB529003 DQ893648 DQ895603 AF348076 AY028964 BC022515 AK313332 AK122904 NM_032028	-789170	-	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	138247	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	138659	+	BC015371 NM_170775 BC040722	209447	+	AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2##AK128596|MCC|4163|mutated in colorectal cancers##NM_001085377|MCC|4163|mutated in colorectal cancers##DQ893648|TSSK1B|83942|testis-specific serine kinase 1B##DQ895603|TSSK1B|83942|testis-specific serine kinase 1B##AF348076|TSSK1B|83942|testis-specific serine kinase 1B##AY028964|TSSK1B|83942|testis-specific serine kinase 1B##BC022515|TSSK1B|83942|testis-specific serine kinase 1B##AK313332|TSSK1B|83942|testis-specific serine kinase 1B##AK122904|TSSK1B|83942|testis-specific serine kinase 1B##NM_032028|TSSK1B|83942|testis-specific serine kinase 1B##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	0.954847	CTCF.p2:6:0.955
chr10	133575628	133575808	reg1028002.p1	4.787	+	BC042951 NM_174937 TSC_hg19_v1_chr10_-_133110013	-465717	-	TSC_hg19_v1_chr10_-_133109808 BC093639 BC101535	-465898	-	TSC_hg19_v1_chr10_+_131934681 AJ010841 AB463691	-1641003	+	CU692440 AB528671 U15174 BC009342 BC080643 TSC_hg19_v1_chr10_-_133795428 AK222626 AK295136 BC021989 AF002697 NM_004052	219658	-	TSC_hg19_v1_chr10_-_133795461 BC067818	219751	-	NM_001105521	342594	+	BC042951|TCERG1L|256536|transcription elongation regulator 1-like##NM_174937|TCERG1L|256536|transcription elongation regulator 1-like##BC093639|TCERG1L|256536|transcription elongation regulator 1-like##BC101535|TCERG1L|256536|transcription elongation regulator 1-like##AJ010841|GLRX3|10539|glutaredoxin 3##U15174|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC009342|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC080643|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK222626|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK295136|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC021989|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AF002697|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_004052|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC067818|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_001105521|JAKMIP3|282973|Janus kinase and microtubule interacting protein 3	0.0	
chr10	22282439	22282600	reg1028165.p1	4.787	+	AY598745 CU687346 NM_001195626 AF060929 AF060934 AF060935 AF060936 AF060937 AF060938	-458894	+	TSC_hg19_v1_chr10_+_21823382 AB209755 BC052798 BC094844 BC129946	-459125	+	U13948 TSC_hg19_v1_chr10_+_21823274 BC065376 BC080577	-459243	+	AY225122 AK027263 TSC_hg19_v1_chr10_-_22292522 BC014436	9930	-	TSC_hg19_v1_chr10_-_22292660 BC110894 NM_022365 AK308369	10146	-	NM_001199938	216392	-	AY598745|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##NM_001195626|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060929|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060934|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060935|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060936|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060937|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060938|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AB209755|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC052798|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC094844|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC129946|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##U13948|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC065376|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC080577|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AY225122|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK027263|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC014436|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1	0.870926	CTCF.p2:3:0.871
chr1	179679016	179679196	reg1029938.p1	4.787	+	AK092142 AX747378 NM_001199092	-103745	+	NM_001199089 AK127370 BC130532 BC144058	-118100	+	AK126889 NM_001199091 NM_001199085 NM_173533	-118355	+	AY902195 BC009382 NM_173509 TSC_hg19_v1_chr1_+_179712397	33245	+	TSC_hg19_v1_chr1_+_179712425 AK310711	33318	+	AK313887 TSC_hg19_v1_chr1_+_179712524	33410	+	AK092142|TDRD5|163589|tudor domain containing 5##NM_001199092|TDRD5|163589|tudor domain containing 5##NM_001199089|TDRD5|163589|tudor domain containing 5##AK127370|TDRD5|163589|tudor domain containing 5##BC130532|TDRD5|163589|tudor domain containing 5##BC144058|TDRD5|163589|tudor domain containing 5##AK126889|TDRD5|163589|tudor domain containing 5##NM_001199091|TDRD5|163589|tudor domain containing 5##NM_001199085|TDRD5|163589|tudor domain containing 5##NM_173533|TDRD5|163589|tudor domain containing 5##AY902195|FAM163A|148753|family with sequence similarity 163, member A##BC009382|FAM163A|148753|family with sequence similarity 163, member A##NM_173509|FAM163A|148753|family with sequence similarity 163, member A##AK310711|FAM163A|148753|family with sequence similarity 163, member A##AK313887|FAM163A|148753|family with sequence similarity 163, member A	0.0	
chr14	22961174	22961351	reg1027931.p1	4.787	+	AB463964 NM_001001912 AY726598	-827940	+	NM_001005466 AB529274 BC137371 BC137382	-858216	-	AB528817 NM_001005465	-922388	-	X58763 TSC_hg19_v1_chr14_+_22989364	28087	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	96824	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	96872	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.0	
chr19	39832407	39832587	reg1012724.p1	4.787	+	BC143548 BC143546 TSC_hg19_v1_chr19_-_39826684 BC093799 BC101818 BC143543 NM_004877	-5797	-	AB001993 BC022207 BC061922 BC080180 TSC_hg19_v1_chr19_-_39826665	-5851	-	NM_020862	-26522	-	TSC_hg19_v1_chr19_+_39833098 AK001073	600	+	TSC_hg19_v1_chr19_+_39833101 BC054518 NM_018028 EF601121	618	+	TSC_hg19_v1_chr19_+_39833151 BC080641	661	+	BC143548|GMFG|9535|glia maturation factor, gamma##BC143546|GMFG|9535|glia maturation factor, gamma##BC093799|GMFG|9535|glia maturation factor, gamma##BC101818|GMFG|9535|glia maturation factor, gamma##BC143543|GMFG|9535|glia maturation factor, gamma##NM_004877|GMFG|9535|glia maturation factor, gamma##AB001993|GMFG|9535|glia maturation factor, gamma##BC022207|GMFG|9535|glia maturation factor, gamma##BC061922|GMFG|9535|glia maturation factor, gamma##BC080180|GMFG|9535|glia maturation factor, gamma##NM_020862|LRFN1|57622|leucine rich repeat and fibronectin type III domain containing 1##AK001073|SAMD4B|55095|sterile alpha motif domain containing 4B##BC054518|SAMD4B|55095|sterile alpha motif domain containing 4B##NM_018028|SAMD4B|55095|sterile alpha motif domain containing 4B##EF601121|SAMD4B|55095|sterile alpha motif domain containing 4B##BC080641|SAMD4B|55095|sterile alpha motif domain containing 4B	0.0	
chr4	47492740	47492853	reg1030789.p1	4.787	+	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	-5466	+	TSC_hg19_v1_chr4_-_47465720 BC008371	-27068	-	TSC_hg19_v1_chr4_-_47465683 AY542163 BC015145 NM_017845 AK000509 BC019826 AF182421	-27117	-	TSC_hg19_v1_chr4_+_47708352 D28417	215558	+	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	347294	-	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	423799	-	BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D##BC008371|COMMD8|54951|COMM domain containing 8##AY542163|COMMD8|54951|COMM domain containing 8##BC015145|COMMD8|54951|COMM domain containing 8##NM_017845|COMMD8|54951|COMM domain containing 8##AK000509|COMMD8|54951|COMM domain containing 8##BC019826|COMMD8|54951|COMM domain containing 8##AF182421|COMMD8|54951|COMM domain containing 8##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1	0.0	
chr5	43074116	43074244	reg1026720.p1	4.787	+	AB463523 BC067873 AY032883 NM_001014279	-33884	-	TSC_hg19_v1_chr5_-_42993436 AK056817	-80734	-	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	-262189	-	AK307963 TSC_hg19_v1_chr5_+_43121018 BC045109	46821	+	TSC_hg19_v1_chr5_+_43121609 AK299315 AK307977	47434	+	AK057343 NM_003432 TSC_hg19_v1_chr5_+_43121669 AK310735 BC017923	47504	+	BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39##AK056817|FLJ32255|643977|uncharacterized LOC643977##Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK307963|ZNF131|7690|zinc finger protein 131##AK299315|ZNF131|7690|zinc finger protein 131##AK307977|ZNF131|7690|zinc finger protein 131##AK057343|ZNF131|7690|zinc finger protein 131##NM_003432|ZNF131|7690|zinc finger protein 131##AK310735|ZNF131|7690|zinc finger protein 131##BC017923|ZNF131|7690|zinc finger protein 131	0.954857	CTCF.p2:-32:0.955
chr8	134714768	134714899	reg1028238.p1	4.787	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-130736	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-405336	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-511503	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	993961	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1010246	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	1010441	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr12	26452009	26452190	reg1030106.p1	4.786	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-103514	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-103808	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	-174178	-	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	533981	-	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	638810	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	639131	-	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)	0.0	
chr2	111827432	111827565	reg1028027.p1	4.786	+	AK300513 NM_001142807 BC022268	-337319	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-391676	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-391855	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	50989	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	814128	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	814263	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.0	
chr3	112770413	112770492	reg1000151.p2	4.786	+	BC067743 TSC_hg19_v1_chr3_-_112738514 AK295954 AK293218 BC014673 NM_015412 CR749341	-31906	-	TSC_hg19_v1_chr3_-_112738512 AK301161 EU831596 EU831683 EU831956 EU832050 CU688320 AL117573 BC056663 AK295165 AK304022 AK024325 AK300811 AK304083	-31954	-	NM_014170 NM_138485 BC037163 TSC_hg19_v1_chr3_+_112709842 BC000003 AF161484 BC010137 AK289611 CU691454 DQ892307 DQ895506	-60630	+	AY358328 NM_033254 AK309055	160947	+	BC101582 BC113553 AK056472 NM_001164496 NM_018338	389887	-	TSC_hg19_v1_chr3_-_113233690 AK296160	463234	-	BC067743|C3orf17|25871|chromosome 3 open reading frame 17##AK295954|C3orf17|25871|chromosome 3 open reading frame 17##AK293218|C3orf17|25871|chromosome 3 open reading frame 17##BC014673|C3orf17|25871|chromosome 3 open reading frame 17##NM_015412|C3orf17|25871|chromosome 3 open reading frame 17##CR749341|C3orf17|25871|chromosome 3 open reading frame 17##AK301161|C3orf17|25871|chromosome 3 open reading frame 17##EU831596|C3orf17|25871|chromosome 3 open reading frame 17##EU831683|C3orf17|25871|chromosome 3 open reading frame 17##EU831956|C3orf17|25871|chromosome 3 open reading frame 17##EU832050|C3orf17|25871|chromosome 3 open reading frame 17##AL117573|C3orf17|25871|chromosome 3 open reading frame 17##BC056663|C3orf17|25871|chromosome 3 open reading frame 17##AK295165|C3orf17|25871|chromosome 3 open reading frame 17##AK304022|C3orf17|25871|chromosome 3 open reading frame 17##AK024325|C3orf17|25871|chromosome 3 open reading frame 17##AK300811|C3orf17|25871|chromosome 3 open reading frame 17##AK304083|C3orf17|25871|chromosome 3 open reading frame 17##NM_014170|GTPBP8|29083|GTP-binding protein 8 (putative)##NM_138485|GTPBP8|29083|GTP-binding protein 8 (putative)##BC037163|GTPBP8|29083|GTP-binding protein 8 (putative)##BC000003|GTPBP8|29083|GTP-binding protein 8 (putative)##AF161484|GTPBP8|29083|GTP-binding protein 8 (putative)##BC010137|GTPBP8|29083|GTP-binding protein 8 (putative)##AK289611|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ892307|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ895506|GTPBP8|29083|GTP-binding protein 8 (putative)##AY358328|BOC|91653|Boc homolog (mouse)##NM_033254|BOC|91653|Boc homolog (mouse)##AK309055|BOC|91653|Boc homolog (mouse)##BC101582|WDR52|55779|WD repeat domain 52##BC113553|WDR52|55779|WD repeat domain 52##AK056472|WDR52|55779|WD repeat domain 52##NM_001164496|WDR52|55779|WD repeat domain 52##NM_018338|WDR52|55779|WD repeat domain 52##AK296160|SPICE1|152185|spindle and centriole associated protein 1	0.0	
chr7	138610659	138610805	reg1021142.p1	4.786	+	BC109304 BC109305 AF245517 AK292945 NM_020632 NM_130840	-127838	-	BC131697 AK055841 NM_001085429 BC058028	-128009	+	NM_130841	-151951	-	TSC_hg19_v1_chr7_-_138666114 AM989468 AM989469 AM989472 AM989473 AM989474 NM_001164665 NM_020910	55501	-	TSC_hg19_v1_chr7_-_138720787 BC008842 NM_080660 BC020784	110102	-	AK055851 BX647974 TSC_hg19_v1_chr7_-_138794101	183369	-	BC109304|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC109305|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AF245517|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AK292945|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_020632|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_130840|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC131697|TMEM213|155006|transmembrane protein 213##AK055841|TMEM213|155006|transmembrane protein 213##NM_001085429|TMEM213|155006|transmembrane protein 213##BC058028|TMEM213|155006|transmembrane protein 213##NM_130841|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AM989468|KIAA1549|57670|KIAA1549##AM989469|KIAA1549|57670|KIAA1549##NM_001164665|KIAA1549|57670|KIAA1549##NM_020910|KIAA1549|57670|KIAA1549##BC008842|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##NM_080660|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##BC020784|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##AK055851|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BX647974|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1	0.0	
chr8	110656223	110656303	reg1028389.p1	4.786	+	NM_001099756	-845	-	AK297182 TSC_hg19_v1_chr8_-_110620232	-36037	-	NM_004215 BC005249 BC022506 AK308950 AB007619 AF006265 AY515724	-103853	+	AY705385 AB384607 TSC_hg19_v1_chr8_-_110656972	666	-	BC012082 AK090559 AK096558 TSC_hg19_v1_chr8_-_110657047 NM_001099753 NM_001099754 NM_001099755	774	-	AK055246 NM_001099751 NM_001099752	1520	-	NM_001099756|SYBU|55638|syntabulin (syntaxin-interacting)##AK297182|SYBU|55638|syntabulin (syntaxin-interacting)##NM_004215|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC005249|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC022506|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK308950|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AB007619|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AF006265|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AY515724|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AY705385|SYBU|55638|syntabulin (syntaxin-interacting)##BC012082|SYBU|55638|syntabulin (syntaxin-interacting)##AK090559|SYBU|55638|syntabulin (syntaxin-interacting)##AK096558|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099753|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099754|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099755|SYBU|55638|syntabulin (syntaxin-interacting)##AK055246|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099751|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099752|SYBU|55638|syntabulin (syntaxin-interacting)	0.0	
chrX	129220953	129221054	reg1027086.p2	4.786	+	NM_021946 TSC_hg19_v1_chrX_+_129139243 AK074089	-81797	+	TSC_hg19_v1_chrX_+_129040144 NM_001166221 NM_006649 AK291918 AK298578 BC009649 BC001149 AK304563 BC014987 AF039694 AB590128 CU679427 DQ892549 DQ895760	-180872	+	TSC_hg19_v1_chrX_-_128977856 AL161962 AK096967 AF151847 AY358558 BC006200 BC012826 BC003128 AK001112 AY952881 NM_016032	-243175	-	TSC_hg19_v1_chrX_-_129244438 U32645	23441	-	TSC_hg19_v1_chrX_-_129244474 NM_001421	23475	-	BC017194 AK314972 NM_001127197 TSC_hg19_v1_chrX_-_129244713	23684	-	NM_021946|BCORL1|63035|BCL6 corepressor-like 1##AK074089|BCORL1|63035|BCL6 corepressor-like 1##NM_001166221|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_006649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK291918|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK298578|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC009649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC001149|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK304563|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC014987|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ892549|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ895760|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9##U32645|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001421|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##BC017194|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##AK314972|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001127197|ELF4|2000|E74-like factor 4 (ets domain transcription factor)	0.011612	
chr10	63664648	63664781	reg1028754.p1	4.785	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-3283	+	NM_032199	-3702	+	BC041932 NM_173554	-241996	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	144382	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	363825	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	469329	+	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365	0.18014	
chr10	93253229	93253348	reg1028819.p1	4.785	+	TSC_hg19_v1_chr10_+_93170100 NM_173497 NM_182765 AK295723 AK094625 BC040187 EU832472 EU832551 BX537856	-83107	+	BC071762 TSC_hg19_v1_chr10_+_93170064	-83230	+	TSC_hg19_v1_chr10_+_92980539 AL832496	-272754	+	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	139473	-	AF087874 Y18207 TSC_hg19_v1_chr10_-_93392829 AK299398 AK313149	139526	-	BX537399 NM_005398 TSC_hg19_v1_chr10_-_93392859	139570	-	NM_173497|HECTD2|143279|HECT domain containing 2##NM_182765|HECTD2|143279|HECT domain containing 2##AK295723|HECTD2|143279|HECT domain containing 2##AK094625|HECTD2|143279|HECT domain containing 2##BC040187|HECTD2|143279|HECT domain containing 2##EU832472|HECTD2|143279|HECT domain containing 2##EU832551|HECTD2|143279|HECT domain containing 2##BX537856|HECTD2|143279|HECT domain containing 2##AL832496|PCGF5|84333|polycomb group ring finger 5##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AF087874|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##Y18207|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK299398|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##AK313149|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BX537399|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##NM_005398|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C	0.644873	CTCF.p2:0:0.645
chr13	42980594	42980772	reg1023440.p2	4.785	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	-134398	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	-268473	+	NM_152910 NM_178009 AB078967 AB078968	-357818	+	BC040889 NM_033012	156188	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	167651	+	NM_182508 AK310859 AK098238 BC093659 BC112237	375041	+	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30	0.0	
chr19	17236925	17237105	reg1021598.p3	4.785	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-50422	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-50694	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-99475	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	89157	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	89190	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	100019	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.0	
chr21_gl000210_random	20499	20607	reg1029561.p1	4.785	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	1.216508	CTCF.p2:-5:0.997
chr5	158867348	158867503	reg1030321.p2	4.785	+	BC074723 M65272 NM_002187	-109951	-	TSC_hg19_v1_chr5_+_158690297 AY444562 AK057996 BC013425	-177139	+	NM_145049	-177337	+	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	476400	+	TSC_hg19_v1_chr5_+_159436145 AK315262	568722	+	AK222641 TSC_hg19_v1_chr5_+_159436161 AK222984 NM_003314 U46570	568742	+	BC074723|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##M65272|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_002187|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##AY444562|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK057996|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##BC013425|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_145049|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##AK315262|TTC1|7265|tetratricopeptide repeat domain 1##AK222641|TTC1|7265|tetratricopeptide repeat domain 1##AK222984|TTC1|7265|tetratricopeptide repeat domain 1##NM_003314|TTC1|7265|tetratricopeptide repeat domain 1##U46570|TTC1|7265|tetratricopeptide repeat domain 1	0.0	
chr5	78998879	78999012	reg1029841.p1	4.785	+	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-13273	+	AK095818 TSC_hg19_v1_chr5_+_78908395	-90524	+	TSC_hg19_v1_chr5_+_78908296 BC026061	-90630	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	288013	-	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	332219	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	552940	-	BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##AK095818|PAPD4|167153|PAP associated domain containing 4##BC026061|PAPD4|167153|PAP associated domain containing 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5	0.885408	CTCF.p2:-5:0.885
chr6	170097329	170097431	reg1028026.p1	4.785	+	TSC_hg19_v1_chr6_-_169654117 L12350 NM_003247 AK292429	-443266	-	BC146676 BC150175 TSC_hg19_v1_chr6_-_169653942	-443447	-	TSC_hg19_v1_chr6_-_169650910 AB384955	-446478	-	TSC_hg19_v1_chr6_-_170102126 AK293148 NM_001202550 NM_182552	4777	-	TSC_hg19_v1_chr6_+_170102234 AK295061 AK295962	4839	+	TSC_hg19_v1_chr6_+_170102236 AF451991 BC051700 NM_001029863	4868	+	L12350|THBS2|7058|thrombospondin 2##NM_003247|THBS2|7058|thrombospondin 2##AK292429|THBS2|7058|thrombospondin 2##BC146676|THBS2|7058|thrombospondin 2##BC150175|THBS2|7058|thrombospondin 2##AK293148|WDR27|253769|WD repeat domain 27##NM_001202550|WDR27|253769|WD repeat domain 27##NM_182552|WDR27|253769|WD repeat domain 27##AK295061|C6orf120|387263|chromosome 6 open reading frame 120##AK295962|C6orf120|387263|chromosome 6 open reading frame 120##AF451991|C6orf120|387263|chromosome 6 open reading frame 120##BC051700|C6orf120|387263|chromosome 6 open reading frame 120##NM_001029863|C6orf120|387263|chromosome 6 open reading frame 120	0.72719	CTCF.p2:20:0.727
chr6_cox_hap2	4559831	4559914	reg1027636.p1	4.785	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.915682	CTCF.p2:-7:0.916
chr9	5429274	5429410	reg1029669.p1	4.785	+	X00949 DQ893302 DQ896468 BC005956 NM_006911	-89534	-	HQ258745 NM_005059 NM_134441 X00948 BC126415 BC126419	-124748	-	BC026254 AK291543 L34838 NM_002195 CU693182	-197880	+	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	8538	-	TSC_hg19_v1_chr9_+_5450455 NM_014143 DQ836393 AK300470 AK314567 AF233516 BC069381	21165	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	81321	+	X00949|RLN1|6013|relaxin 1##DQ893302|RLN1|6013|relaxin 1##DQ896468|RLN1|6013|relaxin 1##BC005956|RLN1|6013|relaxin 1##NM_006911|RLN1|6013|relaxin 1##HQ258745|RLN2|6019|relaxin 2##NM_005059|RLN2|6019|relaxin 2##NM_134441|RLN2|6019|relaxin 2##X00948|RLN2|6019|relaxin 2##BC126415|RLN2|6019|relaxin 2##BC126419|RLN2|6019|relaxin 2##BC026254|INSL4|3641|insulin-like 4 (placenta)##AK291543|INSL4|3641|insulin-like 4 (placenta)##L34838|INSL4|3641|insulin-like 4 (placenta)##NM_002195|INSL4|3641|insulin-like 4 (placenta)##BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46##NM_014143|CD274|29126|CD274 molecule##DQ836393|CD274|29126|CD274 molecule##AK300470|CD274|29126|CD274 molecule##AK314567|CD274|29126|CD274 molecule##AF233516|CD274|29126|CD274 molecule##BC069381|CD274|29126|CD274 molecule##AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2	0.086435	
chrX	127240702	127240842	reg1030858.p1	4.785	+	AY251532 BC014597 NM_138289	-54412	-	NM_001122716	-1287026	+	TSC_hg19_v1_chrX_-_125686794 BC035674 NM_178470	-1553956	-	BC117447 BC143954 BC143955 AK026426 TSC_hg19_v1_chrX_-_128657421	1416636	-	EU636009 TSC_hg19_v1_chrX_-_128657443	1416672	-	TSC_hg19_v1_chrX_-_128657468 NM_003069 NM_139035	1416690	-	AY251532|ACTRT1|139741|actin-related protein T1##BC014597|ACTRT1|139741|actin-related protein T1##NM_138289|ACTRT1|139741|actin-related protein T1##NM_001122716|CXorf64|100130613|chromosome X open reading frame 64##BC035674|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##NM_178470|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##BC117447|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC143954|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC143955|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##AK026426|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##EU636009|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_003069|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_139035|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	0.090506	
chr11	108031831	108031949	reg1026887.p2	4.784	+	TSC_hg19_v1_chr11_+_107992293 D90228 NM_000019 AK312574 BC010942 BC063853 AB590491	-39599	+	X81882 BC017838 TSC_hg19_v1_chr11_+_107880062 CU687672 AF017061 AF327710	-151861	+	TSC_hg19_v1_chr11_+_107879644 AK292575 BC063306	-152263	+	U58852 AB527441 TSC_hg19_v1_chr11_-_108093291 BC136270 AK291687 X97186	61393	-	D83243 BC050561 TSC_hg19_v1_chr11_-_108093366 BC040356 BC094769 AK290020 NM_002519	61482	-	NM_000051	61668	+	D90228|ACAT1|38|acetyl-CoA acetyltransferase 1##NM_000019|ACAT1|38|acetyl-CoA acetyltransferase 1##AK312574|ACAT1|38|acetyl-CoA acetyltransferase 1##BC010942|ACAT1|38|acetyl-CoA acetyltransferase 1##BC063853|ACAT1|38|acetyl-CoA acetyltransferase 1##X81882|CUL5|8065|cullin 5##BC017838|CUL5|8065|cullin 5##AF017061|CUL5|8065|cullin 5##AF327710|CUL5|8065|cullin 5##AK292575|CUL5|8065|cullin 5##BC063306|CUL5|8065|cullin 5##U58852|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC136270|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AK291687|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##X97186|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##D83243|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC050561|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC040356|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC094769|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AK290020|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##NM_002519|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##NM_000051|ATM|472|ataxia telangiectasia mutated	0.0	
chr15	66790401	66790545	reg1018424.p2	4.784	+	AF093593 AB464224 AK292051 TSC_hg19_v1_chr15_-_66790104 BC014315 AK024763 AK312018 NM_006049	-367	-	TSC_hg19_v1_chr15_+_66694219 AK294322	-96256	+	TSC_hg19_v1_chr15_+_66679272 AK291500 AK312356	-111200	+	L20868 BC005817 BC009888 BC014653 BC010151 BC007996 BC040610 AB208977 BC001365 BC018840 BC095427 TSC_hg19_v1_chr15_-_66797186 AK297490 AK291117 AK297484 AK130784 AK223057 AK291859 AK294113 AK298224 BC066925 D23660 NM_000968	6699	-	AK023175 NM_017975 BX640701	6969	+	AK122787 TSC_hg19_v1_chr15_+_66797663 AK291048 BC090041 BC036900	7185	+	AF093593|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##AK292051|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##BC014315|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##AK024763|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##AK312018|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##NM_006049|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##AK294322|MAP2K1|5604|mitogen-activated protein kinase kinase 1##AK291500|MAP2K1|5604|mitogen-activated protein kinase kinase 1##AK312356|MAP2K1|5604|mitogen-activated protein kinase kinase 1##L20868|RPL4|6124|ribosomal protein L4##BC005817|RPL4|6124|ribosomal protein L4##BC009888|RPL4|6124|ribosomal protein L4##BC014653|RPL4|6124|ribosomal protein L4##BC010151|RPL4|6124|ribosomal protein L4##BC007996|RPL4|6124|ribosomal protein L4##BC040610|RPL4|6124|ribosomal protein L4##AB208977|RPL4|6124|ribosomal protein L4##BC001365|RPL4|6124|ribosomal protein L4##BC018840|RPL4|6124|ribosomal protein L4##BC095427|RPL4|6124|ribosomal protein L4##AK291117|RPL4|6124|ribosomal protein L4##AK297484|RPL4|6124|ribosomal protein L4##AK130784|RPL4|6124|ribosomal protein L4##AK223057|RPL4|6124|ribosomal protein L4##AK291859|RPL4|6124|ribosomal protein L4##AK294113|RPL4|6124|ribosomal protein L4##BC066925|RPL4|6124|ribosomal protein L4##D23660|RPL4|6124|ribosomal protein L4##NM_000968|RPL4|6124|ribosomal protein L4##AK023175|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##NM_017975|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BX640701|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AK122787|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AK291048|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC090041|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC036900|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)	0.912495	CTCF.p2:-15:0.912
chr3	136264621	136264798	reg1029404.p2	4.784	+	S67325 TSC_hg19_v1_chr3_+_135969193 BC013768 AB209009 BC053661 AK295312 AK130359 AK225733 AK303079 AK225215 AL831978 CU680676	-295507	+	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	-295545	+	TSC_hg19_v1_chr3_-_135914658 AK091956 NM_018133	-350028	-	TSC_hg19_v1_chr3_-_136471221 BC040708 AB210023 AK309934 BC064699 CR749247 NM_005862	206506	-	BC050423 NM_001097599 NM_001097600 NM_025246 TSC_hg19_v1_chr3_+_136537897 BC022557 AK314079 BC000111 AL136661	273210	+	TSC_hg19_v1_chr3_+_136581071 NM_006153 BC006403	316331	+	S67325|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC013768|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AB209009|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC053661|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK295312|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK130359|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225733|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK303079|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225215|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AL831978|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK091956|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_018133|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##BC040708|STAG1|10274|stromal antigen 1##AB210023|STAG1|10274|stromal antigen 1##AK309934|STAG1|10274|stromal antigen 1##BC064699|STAG1|10274|stromal antigen 1##CR749247|STAG1|10274|stromal antigen 1##NM_005862|STAG1|10274|stromal antigen 1##BC050423|TMEM22|80723|transmembrane protein 22##NM_001097599|TMEM22|80723|transmembrane protein 22##NM_001097600|TMEM22|80723|transmembrane protein 22##NM_025246|TMEM22|80723|transmembrane protein 22##BC022557|TMEM22|80723|transmembrane protein 22##AK314079|TMEM22|80723|transmembrane protein 22##BC000111|TMEM22|80723|transmembrane protein 22##AL136661|TMEM22|80723|transmembrane protein 22##NM_006153|NCK1|4690|NCK adaptor protein 1##BC006403|NCK1|4690|NCK adaptor protein 1	0.857835	CTCF.p2:-33:0.858
chr8	104137254	104137366	reg1027473.p1	4.784	+	TSC_hg19_v1_chr8_+_104033310 AK308632 BC010960 X69151 AK000064	-103990	+	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	-104043	+	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	-260915	-	TSC_hg19_v1_chr8_+_104152984 NM_001024372 NM_024812 BC035038 AK022077 BC011517 AK093819 AF371319 AF371323 DQ893318 DQ896633	15690	+	NM_001164615 BX640609 AK313789	173364	+	NM_001164616 NM_003506 TSC_hg19_v1_chr8_+_104311103 AK299341 AK296824 BC060836 BC036106 AB012911 AK304092 AK316544	173781	+	AK308632|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC010960|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##X69151|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK000064|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##NM_001024372|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_024812|BAALC|79870|brain and acute leukemia, cytoplasmic##BC035038|BAALC|79870|brain and acute leukemia, cytoplasmic##AK022077|BAALC|79870|brain and acute leukemia, cytoplasmic##BC011517|BAALC|79870|brain and acute leukemia, cytoplasmic##AK093819|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371319|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371323|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ893318|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ896633|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_001164615|FZD6|8323|frizzled family receptor 6##BX640609|FZD6|8323|frizzled family receptor 6##AK313789|FZD6|8323|frizzled family receptor 6##NM_001164616|FZD6|8323|frizzled family receptor 6##NM_003506|FZD6|8323|frizzled family receptor 6##AK299341|FZD6|8323|frizzled family receptor 6##AK296824|FZD6|8323|frizzled family receptor 6##BC060836|FZD6|8323|frizzled family receptor 6##BC036106|FZD6|8323|frizzled family receptor 6##AB012911|FZD6|8323|frizzled family receptor 6##AK304092|FZD6|8323|frizzled family receptor 6##AK316544|FZD6|8323|frizzled family receptor 6	0.283621	CTCF.p2:0:0.284
chr8	62623641	62623779	reg1028785.p2	4.784	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	-21364	-	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	-423160	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-1032308	+	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	3308	-	TSC_hg19_v1_chr8_-_62627152 BC015518 BC025236 AK298577	3428	-	TSC_hg19_v1_chr8_-_62627167 NM_001164754 NM_001164755 NM_001164756 NM_004318 NM_032466	3479	-	AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase##BC015518|ASPH|444|aspartate beta-hydroxylase##BC025236|ASPH|444|aspartate beta-hydroxylase##AK298577|ASPH|444|aspartate beta-hydroxylase##NM_001164754|ASPH|444|aspartate beta-hydroxylase##NM_001164755|ASPH|444|aspartate beta-hydroxylase##NM_001164756|ASPH|444|aspartate beta-hydroxylase##NM_004318|ASPH|444|aspartate beta-hydroxylase##NM_032466|ASPH|444|aspartate beta-hydroxylase	0.990119	CTCF.p2:3:0.990
chr12	115062943	115063124	reg1007753.p1	4.783	+	AB051068 AF221714 NM_000192 NM_080717 Y09445	-216815	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-219109	-	NM_080718 U80987 U89353 AB527531 EU446658	-221329	-	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	59107	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	1651917	-	TSC_hg19_v1_chr12_-_116715263 AY338463	1652127	-	AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5##AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like	0.0	
chr4	140524832	140525013	reg1029454.p1	4.783	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-47489	-	AL136904 NM_031296	-149962	+	TSC_hg19_v1_chr4_-_140374867 AK097885	-150048	-	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	62068	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	62212	+	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	549416	-	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AL136904|RAB33B|83452|RAB33B, member RAS oncogene family##NM_031296|RAB33B|83452|RAB33B, member RAS oncogene family##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)	0.997816	CTCF.p2:-8:0.998
chr4	38073686	38073866	reg1030828.p1	4.783	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-94759	+	AF095288 BC069114 BC069400 NM_006607	-111721	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-180987	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	592050	+	AF289565 TSC_hg19_v1_chr4_-_38666549	592713	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	710823	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr7	36323411	36323557	reg1028060.p2	4.783	+	TSC_hg19_v1_chr7_+_36193025 AB051493	-130429	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	-130601	+	TSC_hg19_v1_chr7_+_36192789 NM_030636	-130679	+	TSC_hg19_v1_chr7_-_36406811 BC056191 AB384038 BC136362 BC144032 AB020702 BC110422 NM_001199707 AK293912 AK294686 AK302559 NM_001199706 NM_015314 NM_001199708	83188	-	TSC_hg19_v1_chr7_+_36429470 BC070066 NM_018685 AK299803 AK291254 AF273437	105956	+	BC028678 NM_001100425	106230	-	AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##NM_030636|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC056191|KIAA0895|23366|KIAA0895##BC136362|KIAA0895|23366|KIAA0895##BC144032|KIAA0895|23366|KIAA0895##AB020702|KIAA0895|23366|KIAA0895##BC110422|KIAA0895|23366|KIAA0895##NM_001199707|KIAA0895|23366|KIAA0895##AK293912|KIAA0895|23366|KIAA0895##AK294686|KIAA0895|23366|KIAA0895##AK302559|KIAA0895|23366|KIAA0895##NM_001199706|KIAA0895|23366|KIAA0895##NM_015314|KIAA0895|23366|KIAA0895##NM_001199708|KIAA0895|23366|KIAA0895##BC070066|ANLN|54443|anillin, actin binding protein##NM_018685|ANLN|54443|anillin, actin binding protein##AK299803|ANLN|54443|anillin, actin binding protein##AK291254|ANLN|54443|anillin, actin binding protein##AF273437|ANLN|54443|anillin, actin binding protein##BC028678|KIAA0895|23366|KIAA0895##NM_001100425|KIAA0895|23366|KIAA0895	0.0	
chr9	35096551	35096695	reg1017195.p2	4.783	+	NM_001201484 NM_032634 AK090433 TSC_hg19_v1_chr9_-_35096578 AK074064 NM_152850	-23	-	TSC_hg19_v1_chr9_-_35079753 BC011623 AK293427 AK312987 AJ007669 NM_004629	-16742	-	BT009813 CU674000 AB464437 DQ892166 DQ895360 U70310 BC000032 TSC_hg19_v1_chr9_-_35079678 AK311348	-17019	-	TSC_hg19_v1_chr9_-_35103065 AF161458	6441	-	TSC_hg19_v1_chr9_-_35103124 CU677964 DQ895920 DQ892677 BC003025 AK130546 AK308552 BC014990 AF282596 AK027405 AK225114 BC010152 AK307343 BC002442 AK303883 AK223102	6493	-	TSC_hg19_v1_chr9_-_35103148 AF190167 NM_013442	6527	-	NM_001201484|PIGO|84720|phosphatidylinositol glycan anchor biosynthesis, class O##NM_032634|PIGO|84720|phosphatidylinositol glycan anchor biosynthesis, class O##AK090433|PIGO|84720|phosphatidylinositol glycan anchor biosynthesis, class O##AK074064|PIGO|84720|phosphatidylinositol glycan anchor biosynthesis, class O##NM_152850|PIGO|84720|phosphatidylinositol glycan anchor biosynthesis, class O##BC011623|FANCG|2189|Fanconi anemia, complementation group G##AK293427|FANCG|2189|Fanconi anemia, complementation group G##AK312987|FANCG|2189|Fanconi anemia, complementation group G##AJ007669|FANCG|2189|Fanconi anemia, complementation group G##NM_004629|FANCG|2189|Fanconi anemia, complementation group G##BT009813|FANCG|2189|Fanconi anemia, complementation group G##DQ892166|FANCG|2189|Fanconi anemia, complementation group G##DQ895360|FANCG|2189|Fanconi anemia, complementation group G##U70310|FANCG|2189|Fanconi anemia, complementation group G##BC000032|FANCG|2189|Fanconi anemia, complementation group G##AK311348|FANCG|2189|Fanconi anemia, complementation group G##AF161458|STOML2|30968|stomatin (EPB72)-like 2##DQ895920|STOML2|30968|stomatin (EPB72)-like 2##DQ892677|STOML2|30968|stomatin (EPB72)-like 2##BC003025|STOML2|30968|stomatin (EPB72)-like 2##AK130546|STOML2|30968|stomatin (EPB72)-like 2##BC014990|STOML2|30968|stomatin (EPB72)-like 2##AF282596|STOML2|30968|stomatin (EPB72)-like 2##AK027405|STOML2|30968|stomatin (EPB72)-like 2##AK225114|STOML2|30968|stomatin (EPB72)-like 2##BC010152|STOML2|30968|stomatin (EPB72)-like 2##AK307343|STOML2|30968|stomatin (EPB72)-like 2##BC002442|STOML2|30968|stomatin (EPB72)-like 2##AK303883|STOML2|30968|stomatin (EPB72)-like 2##AK223102|STOML2|30968|stomatin (EPB72)-like 2##AF190167|STOML2|30968|stomatin (EPB72)-like 2##NM_013442|STOML2|30968|stomatin (EPB72)-like 2	0.899064	CTCF.p2:37:0.899
chrX	46772549	46772651	reg1029624.p1	4.783	+	TSC_hg19_v1_chrX_+_46771855 AK291220 NM_001077445 D86969 NM_014735 BC113880 BC114487 AF127774	-665	+	TSC_hg19_v1_chrX_+_46696479 AK312555 CU692158	-76096	+	BC043348 BC053530 TSC_hg19_v1_chrX_+_46696426	-76174	+	TSC_hg19_v1_chrX_+_46937753 AK223360 NM_004683 NM_152869	165159	+	TSC_hg19_v1_chrX_+_46937812 BC050371 BC058880 AK290136	165237	+	TSC_hg19_v1_chrX_+_46937889 BC073173 AB032064	165330	+	AK291220|PHF16|9767|PHD finger protein 16##NM_001077445|PHF16|9767|PHD finger protein 16##D86969|PHF16|9767|PHD finger protein 16##NM_014735|PHF16|9767|PHD finger protein 16##BC113880|PHF16|9767|PHD finger protein 16##BC114487|PHF16|9767|PHD finger protein 16##AF127774|PHF16|9767|PHD finger protein 16##AK312555|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC043348|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC053530|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AK223360|RGN|9104|regucalcin (senescence marker protein-30)##NM_004683|RGN|9104|regucalcin (senescence marker protein-30)##NM_152869|RGN|9104|regucalcin (senescence marker protein-30)##BC050371|RGN|9104|regucalcin (senescence marker protein-30)##BC058880|RGN|9104|regucalcin (senescence marker protein-30)##AK290136|RGN|9104|regucalcin (senescence marker protein-30)##BC073173|RGN|9104|regucalcin (senescence marker protein-30)##AB032064|RGN|9104|regucalcin (senescence marker protein-30)	1.2117	CTCF.p2:16:0.221	CTCF.p2:-77:0.977
chr12	22142910	22143016	reg1028675.p1	4.782	+	AK056519 TSC_hg19_v1_chr12_-_22094251 BC033804	-48713	-	NM_005691 NM_020297	-53336	-	BC000544 AK291821 D50312 NM_004982	-215283	-	TSC_hg19_v1_chr12_+_22199207 BC016609 NM_018686 AL832975 AK022927 AK222981	56209	+	AF271388 TSC_hg19_v1_chr12_+_22199226 AF397212	56266	+	BC117285 BC126162 BC031081 BC046158 AK315340 EU041716 NM_003034 X77922 TSC_hg19_v1_chr12_-_22487789	344717	-	AK056519|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##BC033804|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##NM_005691|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##NM_020297|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##BC000544|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##AK291821|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##D50312|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##NM_004982|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##BC016609|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##NM_018686|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AL832975|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK022927|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK222981|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##BC117285|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC126162|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC031081|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC046158|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AK315340|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##EU041716|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##NM_003034|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##X77922|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	0.109969	
chr2	60743136	60743316	reg1026722.p2	4.782	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2274744	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-2469238	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-2469472	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	37296	-	AF080216 TSC_hg19_v1_chr2_-_60780784	37552	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	240258	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.0	
chr3	185178633	185178784	reg1029118.p1	4.782	+	BC026249 NM_004721 AK296961 AB001872 BC111726	-97776	+	AK302951 TSC_hg19_v1_chr3_+_185046682 BC031677	-132017	+	TSC_hg19_v1_chr3_+_185000783 NM_001242314 NM_001242317 AK297646 BC036593 AK312714 BC015996	-177959	+	TSC_hg19_v1_chr3_-_185216824 EU831805 EU831882 AK313954 BC019884 BC008043 BX647928 AY358547 AK172748 AK290878 NM_080652	37991	-	CU687970 TSC_hg19_v1_chr3_-_185270374 AK298380 AY036912 AY093498 EF186228 EF186229 BC064941 AK122651 NM_139248	91620	-	AK304402 TSC_hg19_v1_chr3_+_185304106 AF151697 NM_021627 AK296772 AK027599 AK296744 BC040609 CU691906 AB037752 AB385449 AL834380	125375	+	NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK302951|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC031677|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_001242314|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_001242317|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK297646|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC036593|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK312714|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC015996|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##EU831805|TMEM41A|90407|transmembrane protein 41A##EU831882|TMEM41A|90407|transmembrane protein 41A##AK313954|TMEM41A|90407|transmembrane protein 41A##BC019884|TMEM41A|90407|transmembrane protein 41A##BC008043|TMEM41A|90407|transmembrane protein 41A##BX647928|TMEM41A|90407|transmembrane protein 41A##AY358547|TMEM41A|90407|transmembrane protein 41A##AK172748|TMEM41A|90407|transmembrane protein 41A##AK290878|TMEM41A|90407|transmembrane protein 41A##NM_080652|TMEM41A|90407|transmembrane protein 41A##AK298380|LIPH|200879|lipase, member H##AY036912|LIPH|200879|lipase, member H##AY093498|LIPH|200879|lipase, member H##EF186228|LIPH|200879|lipase, member H##EF186229|LIPH|200879|lipase, member H##BC064941|LIPH|200879|lipase, member H##AK122651|LIPH|200879|lipase, member H##NM_139248|LIPH|200879|lipase, member H##AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2	0.996189	CTCF.p2:-6:0.996
chr5	151841816	151841970	reg1035363.p1	4.782	+	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	-57142	-	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	-537531	-	TSC_hg19_v1_chr5_+_151151662 X78262	-690229	+	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	1028372	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	1576564	-	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	1576631	+	AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##X78262|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3	0.0	
chr6	35520188	35520295	reg1027746.p2	4.782	+	CU689498 EU446712 BC065261 NM_003322 BC032714 BC001761 BC021268 AB593124 AB593123 DQ426893	-39567	-	BC010053 BC027877 BC091488 AF142482 TSC_hg19_v1_chr6_-_35464854 NM_003214	-55429	-	AB082926 BC006791 U12404 TSC_hg19_v1_chr6_+_35436204 BC011366	-84038	+	TSC_hg19_v1_chr6_-_35656616 HM245391 AB209893	136379	-	TSC_hg19_v1_chr6_-_35656693 BC111050 AK222807 AK302704 AK303356 AK312422 BX647390 NM_001145776 AF194172 U71321 NM_001145777 NM_004117	136465	-	BC042605 NM_001145775	176118	-	EU446712|TULP1|7287|tubby like protein 1##BC065261|TULP1|7287|tubby like protein 1##NM_003322|TULP1|7287|tubby like protein 1##BC032714|TULP1|7287|tubby like protein 1##AB593124|TULP1|7287|tubby like protein 1##AB593123|TULP1|7287|tubby like protein 1##DQ426893|TULP1|7287|tubby like protein 1##BC010053|TEAD3|7005|TEA domain family member 3##BC027877|TEAD3|7005|TEA domain family member 3##BC091488|TEAD3|7005|TEA domain family member 3##AF142482|TEAD3|7005|TEA domain family member 3##NM_003214|TEAD3|7005|TEA domain family member 3##AB082926|RPL10A|4736|ribosomal protein L10a##BC006791|RPL10A|4736|ribosomal protein L10a##U12404|RPL10A|4736|ribosomal protein L10a##BC011366|RPL10A|4736|ribosomal protein L10a##HM245391|FKBP5|2289|FK506 binding protein 5##AB209893|FKBP5|2289|FK506 binding protein 5##BC111050|FKBP5|2289|FK506 binding protein 5##AK222807|FKBP5|2289|FK506 binding protein 5##AK302704|FKBP5|2289|FK506 binding protein 5##AK303356|FKBP5|2289|FK506 binding protein 5##AK312422|FKBP5|2289|FK506 binding protein 5##BX647390|FKBP5|2289|FK506 binding protein 5##NM_001145776|FKBP5|2289|FK506 binding protein 5##AF194172|FKBP5|2289|FK506 binding protein 5##U71321|FKBP5|2289|FK506 binding protein 5##NM_001145777|FKBP5|2289|FK506 binding protein 5##NM_004117|FKBP5|2289|FK506 binding protein 5##BC042605|FKBP5|2289|FK506 binding protein 5##NM_001145775|FKBP5|2289|FK506 binding protein 5	0.170738	
chr12	81845070	81845188	reg1031005.p1	4.781	+	AK123372 AK296380 NM_001220479 NM_001220480	-81970	-	TSC_hg19_v1_chr12_+_81471857 BC009317 BC015769 NM_024560 AK025616 AX764482	-373271	+	TSC_hg19_v1_chr12_-_81331487 AB528898 CR407680 BC099921 AK315321 BC046926 BC062332 BC118609 BC122561 AF087693 AF173081 NM_004664	-513539	-	AK294505 AK297372 AK299853 NM_001220477 NM_001220478	146925	-	BC104912 BC143485 NM_001220475 NM_001220476 AK126971 TSC_hg19_v1_chr12_-_82152435 AB210009 NM_001220473 NM_001220474	307242	-	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	307980	-	AK123372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK296380|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220479|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220480|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC009317|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##BC015769|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##NM_024560|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AK025616|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AX764482|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)##BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)##AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)##BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)##BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)##BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)##BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)##AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)##AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)##NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)##AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC104912|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC143485|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220475|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220476|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK126971|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AB210009|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220473|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220474|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	0.998078	CTCF.p2:-4:0.998
chr13	29253101	29253180	reg1021948.p1	4.781	+	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	-19846	+	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	-19932	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	-183896	-	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	39915	-	BC150245 AB018317 NM_001033602 AB384524	345635	+	BC032481 NM_015233 AK293970 BC119654 BC119655 BC129985	749670	+	AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3##BC150245|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AB018317|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_001033602|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2	0.740423	CTCF.p2:17:0.740
chr15	75074239	75074363	reg1028516.p1	4.781	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-33109	+	AK310810 AM233517 AM233518 AM233519 AM233520 AM236046 AM236047 BC023019 AY871801 K03191 AK223108 AK223113 AK313880 NM_000499	-56508	-	TSC_hg19_v1_chr15_-_74988360 BC011534 BC021271 AK056339 NM_001142443 NM_001142444 NM_025083	-85938	-	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	124	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	555	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	30871	+	NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK310810|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233517|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233518|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233519|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233520|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236046|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236047|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC023019|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AY871801|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##K03191|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223108|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223113|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK313880|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##NM_000499|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC011534|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC021271|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK056339|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142443|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142444|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_025083|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like	0.983424	CTCF.p2:41:0.983
chr15	83474946	83475070	reg1029190.p1	4.781	+	BC130569 BC144175 BC144181 NM_001007122 AK122875 AL833295	-196	-	TSC_hg19_v1_chr15_+_83419326 BX538250	-55691	+	TSC_hg19_v1_chr15_-_83419208 BC041394	-55809	-	NM_001080435	2964	+	TSC_hg19_v1_chr15_+_83478391 AK126887 AB075851	3363	+	AF081530 TSC_hg19_v1_chr15_-_83621443 AK292772 BC012109 NM_004839 NM_199330	146414	-	BC130569|FSD2|123722|fibronectin type III and SPRY domain containing 2##BC144175|FSD2|123722|fibronectin type III and SPRY domain containing 2##BC144181|FSD2|123722|fibronectin type III and SPRY domain containing 2##NM_001007122|FSD2|123722|fibronectin type III and SPRY domain containing 2##AK122875|FSD2|123722|fibronectin type III and SPRY domain containing 2##AL833295|FSD2|123722|fibronectin type III and SPRY domain containing 2##NM_001080435|WHAMM|123720|WAS protein homolog associated with actin, golgi membranes and microtubules##AK126887|WHAMM|123720|WAS protein homolog associated with actin, golgi membranes and microtubules##AB075851|WHAMM|123720|WAS protein homolog associated with actin, golgi membranes and microtubules##AF081530|HOMER2|9455|homer homolog 2 (Drosophila)##AK292772|HOMER2|9455|homer homolog 2 (Drosophila)##BC012109|HOMER2|9455|homer homolog 2 (Drosophila)##NM_004839|HOMER2|9455|homer homolog 2 (Drosophila)##NM_199330|HOMER2|9455|homer homolog 2 (Drosophila)	0.041498	
chr2	198650804	198650909	reg1030227.p1	4.781	+	AF272858 BC033674 AK098824 AK058099 NM_033030	-816	-	NM_138395 TSC_hg19_v1_chr2_+_198570134 AB107013 BC026361 BC126294 AK098121 AK301252 BC009115 HQ258326	-80727	+	AK055136 NM_144629 BC111069 TSC_hg19_v1_chr2_-_198540765	-110181	-	NM_197970 AK302817	130	-	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	18514	+	TSC_hg19_v1_chr2_-_200213802 AK025127	1562994	-	AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##NM_138395|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AB107013|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC026361|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC126294|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK098121|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK301252|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC009115|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##HQ258326|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK055136|RFTN2|130132|raftlin family member 2##NM_144629|RFTN2|130132|raftlin family member 2##BC111069|RFTN2|130132|raftlin family member 2##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##AK025127|SATB2|23314|SATB homeobox 2	1.193175	CTCF.p2:-17:0.938	CTCF.p2:49:0.255
chr22	33782409	33782542	reg1030503.p2	4.781	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-328120	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-379749	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-584723	+	AJ007583 AB011181 NM_004737 NM_133642	533895	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1679674	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1871001	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.17288	
chr2	54568973	54569059	reg1029921.p1	4.781	+	AK097617 NM_001100396 BC126244 BC126246 BC144191 BC144192 BC031669	-10928	+	BC068576 AK097417 NM_001003937	-85641	-	NM_138448 AK307096 BC012290 X84195 TSC_hg19_v1_chr2_+_54342769	-226422	+	TSC_hg19_v1_chr2_+_54683463 NM_003128 AB371586 AB209748	114596	+	TSC_hg19_v1_chr2_+_54684338 BC032061	115351	+	TSC_hg19_v1_chr2_+_54785519 AF327441 NM_178313 BC137282 BC137283	216549	+	AK097617|C2orf73|129852|chromosome 2 open reading frame 73##NM_001100396|C2orf73|129852|chromosome 2 open reading frame 73##BC126244|C2orf73|129852|chromosome 2 open reading frame 73##BC126246|C2orf73|129852|chromosome 2 open reading frame 73##BC144191|C2orf73|129852|chromosome 2 open reading frame 73##BC144192|C2orf73|129852|chromosome 2 open reading frame 73##BC031669|C2orf73|129852|chromosome 2 open reading frame 73##BC068576|TSPYL6|388951|TSPY-like 6##AK097417|TSPYL6|388951|TSPY-like 6##NM_001003937|TSPYL6|388951|TSPY-like 6##NM_138448|ACYP2|98|acylphosphatase 2, muscle type##AK307096|ACYP2|98|acylphosphatase 2, muscle type##BC012290|ACYP2|98|acylphosphatase 2, muscle type##X84195|ACYP2|98|acylphosphatase 2, muscle type##NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	0.013882	
chr5	54240218	54240327	reg1030933.p1	4.781	+	TSC_hg19_v1_chr5_+_53813761 AF395536	-426501	+	TSC_hg19_v1_chr5_+_53813656 BC117218 BC117220	-426599	+	TSC_hg19_v1_chr5_+_53813588 AK304195 NM_001145427 BC060791 BC067860 NM_001102575 NM_052870	-426727	+	AB590689 CU680150 AJ973643 X89426 BC011989 NM_001135604 NM_007036 TSC_hg19_v1_chr5_-_54281422 AK300634 AK311817	41111	-	AK312074 BC035802 NM_002104 U26174 DQ894093 EU176203 U35237	79844	+	NM_006144 BC015739 DQ893071 DQ896326 AB528402 CR456968 M18737	158219	+	AF395536|SNX18|112574|sorting nexin 18##BC117218|SNX18|112574|sorting nexin 18##BC117220|SNX18|112574|sorting nexin 18##AK304195|SNX18|112574|sorting nexin 18##NM_001145427|SNX18|112574|sorting nexin 18##BC060791|SNX18|112574|sorting nexin 18##BC067860|SNX18|112574|sorting nexin 18##NM_001102575|SNX18|112574|sorting nexin 18##NM_052870|SNX18|112574|sorting nexin 18##AJ973643|ESM1|11082|endothelial cell-specific molecule 1##X89426|ESM1|11082|endothelial cell-specific molecule 1##BC011989|ESM1|11082|endothelial cell-specific molecule 1##NM_001135604|ESM1|11082|endothelial cell-specific molecule 1##NM_007036|ESM1|11082|endothelial cell-specific molecule 1##AK300634|ESM1|11082|endothelial cell-specific molecule 1##AK311817|ESM1|11082|endothelial cell-specific molecule 1##AK312074|GZMK|3003|granzyme K (granzyme 3; tryptase II)##BC035802|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_002104|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U26174|GZMK|3003|granzyme K (granzyme 3; tryptase II)##DQ894093|GZMK|3003|granzyme K (granzyme 3; tryptase II)##EU176203|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U35237|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	0.678844	CTCF.p2:9:0.679
chr7	48124675	48124855	reg1030477.p1	4.781	+	BC045737 BC031107 NM_001100159	-49654	+	AK302011 BC026189 AF429967 NM_001030019 NM_152782	-56086	-	TSC_hg19_v1_chr7_-_48019247 NM_004507	-105536	-	TSC_hg19_v1_chr7_+_48128282 BC007348 NM_181597	3524	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	4035	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	4190	+	BC045737|C7orf57|136288|chromosome 7 open reading frame 57##BC031107|C7orf57|136288|chromosome 7 open reading frame 57##NM_001100159|C7orf57|136288|chromosome 7 open reading frame 57##AK302011|SUN3|256979|Sad1 and UNC84 domain containing 3##BC026189|SUN3|256979|Sad1 and UNC84 domain containing 3##AF429967|SUN3|256979|Sad1 and UNC84 domain containing 3##NM_001030019|SUN3|256979|Sad1 and UNC84 domain containing 3##NM_152782|SUN3|256979|Sad1 and UNC84 domain containing 3##NM_004507|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BC007348|UPP1|7378|uridine phosphorylase 1##NM_181597|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1	0.0	
chr8	128746125	128746198	reg1004782.p1	4.781	+	DQ486513 NM_001159542	-318305	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-1175437	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-1175606	-	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	2164	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	2329	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	60622	+	DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)	0.0	
chr10	112295984	112296165	reg1008549.p2	4.780	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-38323	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-231374	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-231481	-	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	31418	+	AF067163 TSC_hg19_v1_chr10_+_112344155	48041	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	108055	+	NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20	0.0	
chr1	161733425	161733531	reg1031499.p1	4.780	+	TSC_hg19_v1_chr1_+_161719575 BC006286 AF119226 NM_007240 DQ892766 DQ896011 CU675333 BT006633	-13912	+	AY670683 AY670684 AY670685 AY670686 AY670687 NM_001002901 AY786314	-41023	+	AF531423 NM_001184866 NM_001184867 NM_001184870 NM_001184871 NM_001184872 NM_001184873 NM_032738	-56717	+	NM_007348 TSC_hg19_v1_chr1_+_161736080 AB015856	2592	+	AF005887 AK290498 TSC_hg19_v1_chr1_+_161736109	2632	+	TSC_hg19_v1_chr1_+_161736145 BC014969 BC071997 AB208929 CU677145	2658	+	BC006286|DUSP12|11266|dual specificity phosphatase 12##AF119226|DUSP12|11266|dual specificity phosphatase 12##NM_007240|DUSP12|11266|dual specificity phosphatase 12##DQ892766|DUSP12|11266|dual specificity phosphatase 12##DQ896011|DUSP12|11266|dual specificity phosphatase 12##BT006633|DUSP12|11266|dual specificity phosphatase 12##AY670683|FCRLB|127943|Fc receptor-like B##AY670684|FCRLB|127943|Fc receptor-like B##AY670685|FCRLB|127943|Fc receptor-like B##AY670686|FCRLB|127943|Fc receptor-like B##AY670687|FCRLB|127943|Fc receptor-like B##NM_001002901|FCRLB|127943|Fc receptor-like B##AY786314|FCRLB|127943|Fc receptor-like B##AF531423|FCRLA|84824|Fc receptor-like A##NM_001184866|FCRLA|84824|Fc receptor-like A##NM_001184867|FCRLA|84824|Fc receptor-like A##NM_001184870|FCRLA|84824|Fc receptor-like A##NM_001184871|FCRLA|84824|Fc receptor-like A##NM_001184872|FCRLA|84824|Fc receptor-like A##NM_001184873|FCRLA|84824|Fc receptor-like A##NM_032738|FCRLA|84824|Fc receptor-like A##NM_007348|ATF6|22926|activating transcription factor 6##AB015856|ATF6|22926|activating transcription factor 6##AF005887|ATF6|22926|activating transcription factor 6##AK290498|ATF6|22926|activating transcription factor 6##BC014969|ATF6|22926|activating transcription factor 6##BC071997|ATF6|22926|activating transcription factor 6##AB208929|ATF6|22926|activating transcription factor 6	0.025179	
chr11	64616255	64616436	reg1027672.p2	4.780	+	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	-4256	-	AJ297488 AJ297489 NM_130803 NM_130804	-37580	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	-38151	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	29637	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	29809	-	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	30816	-	AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I##AY007161|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1	0.55976	CTCF.p2:-31:0.560
chr13	41388435	41388577	reg1027944.p2	4.780	+	AF177333 TSC_hg19_v1_chr13_+_41363756	-24740	+	TSC_hg19_v1_chr13_+_41363716 AK313602 AK296862 AF112968	-24822	+	NM_014252 TSC_hg19_v1_chr13_+_41363596 BC002702	-24917	+	TSC_hg19_v1_chr13_-_41495877 AK096993 BC047078 BC020814	107359	-	DQ891709 DQ894886 AB385566 CU688886 TSC_hg19_v1_chr13_-_41556203	167690	-	AK304289 BC010575 BC030507 NM_001145353	167882	-	AF177333|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK313602|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK296862|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AF112968|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##NM_014252|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##BC002702|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK096993|LOC100616668|100616668|TPTE2 pseudogene##BC047078|LOC100616668|100616668|TPTE2 pseudogene##BC020814|SUGT1P3|283507|suppressor of G2 allele of SKP1 (S. cerevisiae) pseudogene 3##DQ891709|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##DQ894886|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##AK304289|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##BC010575|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##BC030507|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##NM_001145353|ELF1|1997|E74-like factor 1 (ets domain transcription factor)	0.897841	CTCF.p2:0:0.898
chr17	8894945	8895062	reg1030095.p1	4.780	+	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	-26022	-	AY725853 AF128881 NM_014308	-79187	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-124019	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	29964	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	584128	-	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	584203	-	AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8	0.994961	CTCF.p2:19:0.995
chr19	4207285	4207430	reg1027494.p1	4.780	+	NM_133475	-24007	+	TSC_hg19_v1_chr19_-_4182561 DQ896358 EU176413 AB528632 CR457200 CU678868 BC005026 BC000090 BC004218 AK299420 BC028220 AK293348 AK315048 AK301247 AK074810 AK225567 AF233396 NM_001193285 NM_016539	-24812	-	TSC_hg19_v1_chr19_+_4153636 AK313099 AB050902 AK172839 NM_032607 AB073612 BC101504 BC143609 BC143610 BC101508 EU446882	-53690	+	BC015364 L08187 NM_005755 BC046112 AB528398 DQ891589 EU176581 CU677281	22163	+	TSC_hg19_v1_chr19_+_4247086 AK001236 BC000561 AK023988 NM_018074 AF091080	39733	+	AK056268 NM_020209	71240	+	NM_133475|ANKRD24|170961|ankyrin repeat domain 24##DQ896358|SIRT6|51548|sirtuin 6##EU176413|SIRT6|51548|sirtuin 6##CR457200|SIRT6|51548|sirtuin 6##BC005026|SIRT6|51548|sirtuin 6##BC004218|SIRT6|51548|sirtuin 6##AK299420|SIRT6|51548|sirtuin 6##BC028220|SIRT6|51548|sirtuin 6##AK293348|SIRT6|51548|sirtuin 6##AK315048|SIRT6|51548|sirtuin 6##AK301247|SIRT6|51548|sirtuin 6##AK074810|SIRT6|51548|sirtuin 6##AK225567|SIRT6|51548|sirtuin 6##AF233396|SIRT6|51548|sirtuin 6##NM_001193285|SIRT6|51548|sirtuin 6##NM_016539|SIRT6|51548|sirtuin 6##AK313099|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB050902|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AK172839|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##NM_032607|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB073612|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101504|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143609|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143610|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101508|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##EU446882|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC015364|EBI3|10148|Epstein-Barr virus induced 3##L08187|EBI3|10148|Epstein-Barr virus induced 3##NM_005755|EBI3|10148|Epstein-Barr virus induced 3##BC046112|EBI3|10148|Epstein-Barr virus induced 3##DQ891589|EBI3|10148|Epstein-Barr virus induced 3##EU176581|EBI3|10148|Epstein-Barr virus induced 3##AK001236|CCDC94|55702|coiled-coil domain containing 94##BC000561|CCDC94|55702|coiled-coil domain containing 94##AK023988|CCDC94|55702|coiled-coil domain containing 94##NM_018074|CCDC94|55702|coiled-coil domain containing 94##AF091080|CCDC94|55702|coiled-coil domain containing 94##AK056268|SHD|56961|Src homology 2 domain containing transforming protein D##NM_020209|SHD|56961|Src homology 2 domain containing transforming protein D	0.988436	CTCF.p2:7:0.850
chr5	16934284	16934392	reg1030051.p1	4.780	+	AK316138 TSC_hg19_v1_chr5_-_16742338	-192001	-	TSC_hg19_v1_chr5_-_16738346 AK295736	-195918	-	TSC_hg19_v1_chr5_-_16617097 BC053326 AK025808 NM_001034850	-317213	-	BC050682 BC041694 TSC_hg19_v1_chr5_-_16936357 BC108736 BC032669	1990	-	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	2047	-	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	283274	+	AK316138|MYO10|4651|myosin X##AK295736|MYO10|4651|myosin X##BC053326|FAM134B|54463|family with sequence similarity 134, member B##AK025808|FAM134B|54463|family with sequence similarity 134, member B##NM_001034850|FAM134B|54463|family with sequence similarity 134, member B##BC050682|MYO10|4651|myosin X##BC041694|MYO10|4651|myosin X##BC108736|MYO10|4651|myosin X##BC032669|MYO10|4651|myosin X##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1	0.627712	CTCF.p2:3:0.476
chr16	46724019	46724162	reg1027719.p1	4.779	+	AF139658 TSC_hg19_v1_chr16_+_46723600 BC039032 BC063565 AK310633 AK021946 AB528212 AM392646 AM392910 AM393245 AM393680 AM393794 CU687764	-493	+	BC050725 NM_014321 AK024019 TSC_hg19_v1_chr16_+_46723570 AK024077	-525	+	TSC_hg19_v1_chr16_-_46723112 NM_018206	-963	-	AB451455 BC109096 BC109097 AJ247087 NM_182493	58072	-	TSC_hg19_v1_chr16_-_46865090 CU691166 BC056676 BX647945 NM_001001436	140998	-	TSC_hg19_v1_chr16_+_46918291 AY029173 NM_133443 BC062555	194191	+	AF139658|ORC6|23594|origin recognition complex, subunit 6##BC039032|ORC6|23594|origin recognition complex, subunit 6##BC063565|ORC6|23594|origin recognition complex, subunit 6##AK310633|ORC6|23594|origin recognition complex, subunit 6##AK021946|ORC6|23594|origin recognition complex, subunit 6##AM392646|ORC6|23594|origin recognition complex, subunit 6##AM392910|ORC6|23594|origin recognition complex, subunit 6##AM393245|PPA2|27068|pyrophosphatase (inorganic) 2##AM393680|ORC6|23594|origin recognition complex, subunit 6##AM393794|PPA2|27068|pyrophosphatase (inorganic) 2##BC050725|ORC6|23594|origin recognition complex, subunit 6##NM_014321|ORC6|23594|origin recognition complex, subunit 6##AK024019|ORC6|23594|origin recognition complex, subunit 6##AK024077|ORC6|23594|origin recognition complex, subunit 6##NM_018206|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AB451455|MYLK3|91807|myosin light chain kinase 3##BC109096|MYLK3|91807|myosin light chain kinase 3##BC109097|MYLK3|91807|myosin light chain kinase 3##AJ247087|MYLK3|91807|myosin light chain kinase 3##NM_182493|MYLK3|91807|myosin light chain kinase 3##BC056676|C16orf87|388272|chromosome 16 open reading frame 87##BX647945|C16orf87|388272|chromosome 16 open reading frame 87##NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87##AY029173|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##NM_133443|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##BC062555|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2	0.0	
chr17	42956113	42956226	reg1027721.p1	4.779	+	BC020667 NM_016438	-30891	+	NM_001080383	-47991	-	NM_005497 TSC_hg19_v1_chr17_-_42907633	-48529	-	AK128148 AK225335 TSC_hg19_v1_chr17_-_42976764 AK293108 BC002360	20581	-	TSC_hg19_v1_chr17_-_42976775 AK302828 D21163	20613	-	TSC_hg19_v1_chr17_-_42976800 AK296367 AK297392 AK316098	20639	-	BC020667|HIGD1B|51751|HIG1 hypoxia inducible domain family, member 1B##NM_016438|HIGD1B|51751|HIG1 hypoxia inducible domain family, member 1B##NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa##NM_005497|GJC1|10052|gap junction protein, gamma 1, 45kDa##AK128148|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK225335|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK293108|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##BC002360|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK302828|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##D21163|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK296367|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK297392|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2##AK316098|EFTUD2|9343|elongation factor Tu GTP binding domain containing 2	0.995162	CTCF.p2:19:0.995
chr20	7253266	7253421	reg1031527.p1	4.779	+	BC069214 NM_001200	-504599	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-1149180	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-1149466	-	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	667759	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	746957	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	747064	-	BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4	0.976284	CTCF.p2:22:0.976
chr15	72448253	72448434	reg1002944.p1	4.778	+	AF308450 TSC_hg19_v1_chr15_+_72410743 BC031411	-37595	+	AK292298 NM_001172111 NM_145204 TSC_hg19_v1_chr15_+_72410636 AY008293	-37696	+	TSC_hg19_v1_chr15_-_72410432 BC150294 BC060886 NM_006901	-37948	-	BC038451 AK095072 NM_001012642 TSC_hg19_v1_chr15_-_72490157	41792	-	Z36786 TSC_hg19_v1_chr15_-_72501152 BC019265	52781	-	AK309781 NM_001206799	73719	-	AF308450|SENP8|123228|SUMO/sentrin specific peptidase family member 8##BC031411|SENP8|123228|SUMO/sentrin specific peptidase family member 8##AK292298|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172111|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_145204|SENP8|123228|SUMO/sentrin specific peptidase family member 8##AY008293|SENP8|123228|SUMO/sentrin specific peptidase family member 8##BC150294|MYO9A|4649|myosin IXA##BC060886|MYO9A|4649|myosin IXA##NM_006901|MYO9A|4649|myosin IXA##BC038451|GRAMD2|196996|GRAM domain containing 2##AK095072|GRAMD2|196996|GRAM domain containing 2##NM_001012642|GRAMD2|196996|GRAM domain containing 2##BC019265|PKM2|5315|pyruvate kinase, muscle##AK309781|PKM2|5315|pyruvate kinase, muscle##NM_001206799|PKM2|5315|pyruvate kinase, muscle	0.0	
chr19	5480679	5480813	reg1029944.p2	4.778	+	AK098722 NM_181710 AK292251 BC017592	-25320	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	-139952	-	TSC_hg19_v1_chr19_+_5032899 CU687848	-447847	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	142012	-	TSC_hg19_v1_chr19_-_5622794 NM_014649	142119	-	NM_001201338 NM_001201339 NM_001201340 NM_002967 TSC_hg19_v1_chr19_+_5623093 AK294718	142326	+	AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2##NM_014649|SAFB2|9667|scaffold attachment factor B2##NM_001201338|SAFB|6294|scaffold attachment factor B##NM_001201339|SAFB|6294|scaffold attachment factor B##NM_001201340|SAFB|6294|scaffold attachment factor B##NM_002967|SAFB|6294|scaffold attachment factor B##AK294718|SAFB|6294|scaffold attachment factor B	0.155269	
chr6	76272869	76272979	reg1026600.p1	4.778	+	AK290232 BC136443 BC136444 AL832009 AK097021 BC110829 BX647178 NM_015687 TSC_hg19_v1_chr6_-_76203497	-69548	-	TSC_hg19_v1_chr6_+_75994737 EF565086	-278169	+	NM_001143958 NM_018247 TSC_hg19_v1_chr6_-_75994700	-278254	-	AK126921 TSC_hg19_v1_chr6_+_76311581	38481	+	TSC_hg19_v1_chr6_+_76311617 NM_001100409 NM_015571	38695	+	TSC_hg19_v1_chr6_+_76311642 AK096455	38712	+	AK290232|FILIP1|27145|filamin A interacting protein 1##BC136443|FILIP1|27145|filamin A interacting protein 1##BC136444|FILIP1|27145|filamin A interacting protein 1##AL832009|FILIP1|27145|filamin A interacting protein 1##AK097021|FILIP1|27145|filamin A interacting protein 1##BX647178|FILIP1|27145|filamin A interacting protein 1##NM_015687|FILIP1|27145|filamin A interacting protein 1##EF565086|LOC100506804|100506804|uncharacterized LOC100506804##NM_001143958|TMEM30A|55754|transmembrane protein 30A##NM_018247|TMEM30A|55754|transmembrane protein 30A##AK126921|SENP6|26054|SUMO1/sentrin specific peptidase 6##NM_001100409|SENP6|26054|SUMO1/sentrin specific peptidase 6##NM_015571|SENP6|26054|SUMO1/sentrin specific peptidase 6##AK096455|SENP6|26054|SUMO1/sentrin specific peptidase 6	0.166691	
chr8	63678882	63678979	reg1029606.p2	4.778	+	TSC_hg19_v1_chr8_+_63161499 AK096949 NM_173688 AX721226 AB463913	-517366	+	TSC_hg19_v1_chr8_+_63161185 AK299689	-517724	+	TSC_hg19_v1_chr8_-_62627167 NM_001164754 NM_001164755 NM_001164756 NM_004318 NM_032466	-1051741	-	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	272468	-	NM_003878	272679	-	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	319697	-	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_001164754|ASPH|444|aspartate beta-hydroxylase##NM_001164755|ASPH|444|aspartate beta-hydroxylase##NM_001164756|ASPH|444|aspartate beta-hydroxylase##NM_004318|ASPH|444|aspartate beta-hydroxylase##NM_032466|ASPH|444|aspartate beta-hydroxylase##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##NM_003878|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein	0.196811	
chr10	80071368	80071451	reg1029048.p2	4.777	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-277778	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-277853	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-282095	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	757379	+	TSC_hg19_v1_chr10_+_80899458 AK025812	828075	+	TSC_hg19_v1_chr10_+_81003207 AB033050	931721	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.638921	CTCF.p2:14:0.639
chr1	21310170	21310261	reg1031164.p2	4.777	+	AK304065 TSC_hg19_v1_chr1_-_21113801	-196396	-	TSC_hg19_v1_chr1_-_21113791 BC046170	-196438	-	TSC_hg19_v1_chr1_-_21113163 AK023129 NM_016287	-197043	-	TSC_hg19_v1_chr1_-_21377387 BC094683	67175	-	BC136643 BC144335 TSC_hg19_v1_chr1_-_21377462 AK225489	67251	-	TSC_hg19_v1_chr1_-_21415672 AK302087	105471	-	AK304065|HP1BP3|50809|heterochromatin protein 1, binding protein 3##BC046170|HP1BP3|50809|heterochromatin protein 1, binding protein 3##AK023129|HP1BP3|50809|heterochromatin protein 1, binding protein 3##NM_016287|HP1BP3|50809|heterochromatin protein 1, binding protein 3##BC094683|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC136643|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC144335|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##AK225489|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##AK302087|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3	0.808811	CTCF.p2:-9:0.809
chr12	6476941	6477080	reg1031594.p1	4.777	+	M58286 TSC_hg19_v1_chr12_-_6451171 M33294 AK056611 AK298729 AK304517 M63121 AK308061 AK291088 BC010140 AK315509 NM_001065	-25790	-	AB590201 EU176385 EU176726 CU679633 EU927389 M60275 TSC_hg19_v1_chr12_-_6451145	-25948	-	TSC_hg19_v1_chr12_-_6442970 AY182755	-34016	-	AK172792 NM_001159576 TSC_hg19_v1_chr12_-_6484414	7392	-	TSC_hg19_v1_chr12_-_6484617 AY365119 X76180	7625	-	NM_001038	7894	-	M58286|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M33294|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK056611|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK298729|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK304517|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M63121|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK308061|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK291088|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##BC010140|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK315509|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##NM_001065|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU176385|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU176726|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU927389|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M60275|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AY182755|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK172792|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001159576|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##AY365119|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##X76180|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001038|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha	0.0	
chr16	81512601	81512757	reg1028373.p1	4.777	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-33846	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-164029	+	TSC_hg19_v1_chr16_+_81348566 AK095378 NM_022041 AF291673	-164110	+	AY172689 NM_030629	16274	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	300218	+	TSC_hg19_v1_chr16_+_81812901 AB208914	300223	+	NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##AK095378|GAN|8139|gigaxonin##NM_022041|GAN|8139|gigaxonin##AF291673|GAN|8139|gigaxonin##AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr17	71475259	71475352	reg1025567.p1	4.777	+	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-167165	-	BC157870 NM_001129885	-217287	-	BC005005 TSC_hg19_v1_chr17_+_71229423	-245915	+	NM_001144952	164921	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	724510	+	TSC_hg19_v1_chr17_+_72199849 BC000603	724548	+	BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##BC005005|C17orf80|55028|chromosome 17 open reading frame 80##NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38	0.785909	CTCF.p2:27:0.786
chr4	114027382	114027516	reg1027595.p1	4.777	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	-56615	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-288148	+	NM_015454 TSC_hg19_v1_chr4_+_113558677	-468781	+	TSC_hg19_v1_chr4_+_114214102 AK294720	186670	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	654832	-	TSC_hg19_v1_chr4_-_114682341 AK294517	654907	-	NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7##AK294720|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK294517|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.59275	CTCF.p2:-25:0.593
chr6	80579426	80579563	reg1028452.p2	4.777	+	TSC_hg19_v1_chr6_+_80341019 AF340151 NM_031469 BC109043 BC109044 AK311757 BC040489 AK074506 BC052987 BC060799 BC070059 AJ297972	-238420	+	TSC_hg19_v1_chr6_-_80247114 AK299314 BX648161 BC050327 NM_001122769 NM_181714	-332365	-	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	-635069	-	NM_001243308	642	-	TSC_hg19_v1_chr6_-_80656870 CU691582 DQ891229 AF277094 BC038506 AY037298 AK310625 AK312511 AK055277 DQ426871 NM_022726	77598	-	NM_001166691 NM_003318 TSC_hg19_v1_chr6_+_80714370 AX775733 BC032858 BC000633 AK292460	134858	+	AF340151|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_031469|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109043|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109044|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK311757|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC040489|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK074506|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC052987|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC060799|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC070059|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AJ297972|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK299314|LCA5|167691|Leber congenital amaurosis 5##BX648161|LCA5|167691|Leber congenital amaurosis 5##BC050327|LCA5|167691|Leber congenital amaurosis 5##NM_001122769|LCA5|167691|Leber congenital amaurosis 5##NM_181714|LCA5|167691|Leber congenital amaurosis 5##AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7##DQ891229|ELOVL4|6785|ELOVL fatty acid elongase 4##AF277094|ELOVL4|6785|ELOVL fatty acid elongase 4##BC038506|ELOVL4|6785|ELOVL fatty acid elongase 4##AY037298|ELOVL4|6785|ELOVL fatty acid elongase 4##AK310625|ELOVL4|6785|ELOVL fatty acid elongase 4##AK312511|ELOVL4|6785|ELOVL fatty acid elongase 4##AK055277|ELOVL4|6785|ELOVL fatty acid elongase 4##DQ426871|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_022726|ELOVL4|6785|ELOVL fatty acid elongase 4##NM_001166691|TTK|7272|TTK protein kinase##NM_003318|TTK|7272|TTK protein kinase##AX775733|TTK|7272|TTK protein kinase##BC032858|TTK|7272|TTK protein kinase##BC000633|TTK|7272|TTK protein kinase##AK292460|TTK|7272|TTK protein kinase	0.941534	CTCF.p2:-5:0.942
chr11	113667496	113667626	reg1029049.p1	4.776	+	TSC_hg19_v1_chr11_+_113659972 AK093353 AX748073	-7613	+	NM_001101389	-17044	+	TSC_hg19_v1_chr11_-_113644486 NM_004724	-23077	-	TSC_hg19_v1_chr11_-_113746251 CU688104 AF266283 BC065928 AK304376 NM_020886 AK304770 AK097623	78730	-	AK314268 NM_006028 AF169255 AF080582 AB463385	108025	+	AK304630 NM_000869 NM_213621 D49394 AK313896 BC004453 BC002354 AJ003078 AJ003079 AJ003080 BT007204 AB587356 AF498984 CU677922 DQ892003 DQ895193	178360	+	AK093353|LOC390251|390251|SH3-domain GRB2-like 1 pseudogene##NM_001101389|CLDN25|644672|claudin 25##NM_004724|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AF266283|USP28|57646|ubiquitin specific peptidase 28##BC065928|USP28|57646|ubiquitin specific peptidase 28##AK304376|USP28|57646|ubiquitin specific peptidase 28##NM_020886|USP28|57646|ubiquitin specific peptidase 28##AK304770|USP28|57646|ubiquitin specific peptidase 28##AK097623|USP28|57646|ubiquitin specific peptidase 28##AK314268|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##NM_006028|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##AF169255|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##AF080582|HTR3B|9177|5-hydroxytryptamine (serotonin) receptor 3B##AK304630|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##NM_000869|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##NM_213621|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##D49394|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AK313896|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##BC004453|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##BC002354|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AJ003078|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AJ003079|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AJ003080|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##BT007204|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##AF498984|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##DQ892003|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A##DQ895193|HTR3A|3359|5-hydroxytryptamine (serotonin) receptor 3A	0.130902	
chr16	68774999	68775124	reg1028997.p1	4.776	+	TSC_hg19_v1_chr16_+_68771304 Z18923	-3750	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	-3816	+	BC144283 TSC_hg19_v1_chr16_+_68771216 AK290012 Z13009	-3842	+	TSC_hg19_v1_chr16_+_68877504 BC092500 AB051533 NM_024562 AB463318	102444	+	AK291400 NM_001199280	364405	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	365079	+	Z18923|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC144283|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK290012|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##Z13009|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC092500|TMCO7|79613|transmembrane and coiled-coil domains 7##AB051533|TMCO7|79613|transmembrane and coiled-coil domains 7##NM_024562|TMCO7|79613|transmembrane and coiled-coil domains 7##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3	0.0	
chr20	37354646	37354751	reg1024985.p1	4.776	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-1539	+	NM_080552 TSC_hg19_v1_chr20_+_37353115	-1586	+	TSC_hg19_v1_chr20_+_37230452 NM_001164431	-124185	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	22414	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	79656	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	200291	+	AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##NM_080552|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##NM_001164431|ARHGAP40|343578|Rho GTPase activating protein 40##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D	0.424899	CTCF.p2:14:0.425
chr2	191044957	191045083	reg1026384.p1	4.776	+	NM_001042520	-30049	+	NM_001042521	-42535	+	AF019627 AB527883 EU446953 BC074757 AK291524 AF104922 NM_005259	-117633	-	NM_001042519 BC005083 NM_032321 AK313395	620	+	TSC_hg19_v1_chr2_-_191184553 AK222979 AK223023 AK308042 BC067822 AK313651 U66669 BC005190	139519	-	NM_014362 NM_198047	139750	-	NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042521|C2orf88|84281|chromosome 2 open reading frame 88##AF019627|MSTN|2660|myostatin##EU446953|MSTN|2660|myostatin##BC074757|MSTN|2660|myostatin##AK291524|MSTN|2660|myostatin##AF104922|MSTN|2660|myostatin##NM_005259|MSTN|2660|myostatin##NM_001042519|C2orf88|84281|chromosome 2 open reading frame 88##BC005083|C2orf88|84281|chromosome 2 open reading frame 88##NM_032321|C2orf88|84281|chromosome 2 open reading frame 88##AK313395|C2orf88|84281|chromosome 2 open reading frame 88##AK222979|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK223023|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK308042|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##BC067822|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK313651|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##U66669|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##BC005190|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_014362|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_198047|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase	0.500414	CTCF.p2:15:0.500
chr10	116286796	116286921	reg1027271.p2	4.775	+	TSC_hg19_v1_chr10_-_116286673 CR749819 NM_006720 AK098277	-179	-	TSC_hg19_v1_chr10_-_116286631 AK298709 BC002448	-256	-	CU677968 TSC_hg19_v1_chr10_-_116251632	-35251	-	AK297344 TSC_hg19_v1_chr10_-_116392101	105242	-	AF005654 NM_002313	131198	-	AB462929 TSC_hg19_v1_chr10_-_116444183 D31883	157305	-	CR749819|ABLIM1|3983|actin binding LIM protein 1##NM_006720|ABLIM1|3983|actin binding LIM protein 1##AK098277|ABLIM1|3983|actin binding LIM protein 1##AK298709|ABLIM1|3983|actin binding LIM protein 1##BC002448|ABLIM1|3983|actin binding LIM protein 1##AK297344|ABLIM1|3983|actin binding LIM protein 1##AF005654|ABLIM1|3983|actin binding LIM protein 1##NM_002313|ABLIM1|3983|actin binding LIM protein 1##D31883|ABLIM1|3983|actin binding LIM protein 1	0.0	
chr10	127472746	127472869	reg1031501.p1	4.775	+	AF331526 AF520613 NM_147191	-8418	-	AK314958 TSC_hg19_v1_chr10_+_127429050	-43767	+	TSC_hg19_v1_chr10_+_127408278 BX648348 AK091507 AX747027	-64495	+	AK314896 J03824 TSC_hg19_v1_chr10_-_127511784	38933	-	BC002573 TSC_hg19_v1_chr10_-_127511816	39005	-	TSC_hg19_v1_chr10_-_127511833 NM_000375	39029	-	AF331526|MMP21|118856|matrix metallopeptidase 21##AF520613|MMP21|118856|matrix metallopeptidase 21##NM_147191|MMP21|118856|matrix metallopeptidase 21##AK314958|C10orf137|26098|chromosome 10 open reading frame 137##BX648348|C10orf137|26098|chromosome 10 open reading frame 137##AK091507|C10orf137|26098|chromosome 10 open reading frame 137##AK314896|UROS|7390|uroporphyrinogen III synthase##J03824|UROS|7390|uroporphyrinogen III synthase##BC002573|UROS|7390|uroporphyrinogen III synthase##NM_000375|UROS|7390|uroporphyrinogen III synthase	0.0	
chr18	71187586	71187709	reg1029996.p2	4.775	+	AF448838 BC050329 NM_001201465 NM_138966	-652838	-	AF448839 NM_138999	-654714	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	-975917	-	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	627380	-	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	628147	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	771532	-	AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_182511|CBLN2|147381|cerebellin 2 precursor##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15##NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)	0.334299	CTCF.p2:-36:0.215
chr5	42949512	42949641	reg1030599.p1	4.775	+	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	-137585	-	AK303469 NM_001134848 AK127368 BC015985 BC039102 TSC_hg19_v1_chr5_+_42756958	-192638	+	BC136496 NM_001242460 NM_001242461 NM_001242462	-383612	+	TSC_hg19_v1_chr5_-_42993436 AK056817	43870	-	AB463523 BC067873 AY032883 NM_001014279	90720	-	AK307963 TSC_hg19_v1_chr5_+_43121018 BC045109	171425	+	Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK303469|CCDC152|100129792|coiled-coil domain containing 152##NM_001134848|CCDC152|100129792|coiled-coil domain containing 152##AK127368|CCDC152|100129792|coiled-coil domain containing 152##BC015985|CCDC152|100129792|coiled-coil domain containing 152##BC039102|CCDC152|100129792|coiled-coil domain containing 152##BC136496|GHR|2690|growth hormone receptor##NM_001242460|GHR|2690|growth hormone receptor##NM_001242461|GHR|2690|growth hormone receptor##NM_001242462|GHR|2690|growth hormone receptor##AK056817|FLJ32255|643977|uncharacterized LOC643977##BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39##AK307963|ZNF131|7690|zinc finger protein 131	0.0	
chr8	66864229	66864409	reg1027018.p2	4.775	+	TSC_hg19_v1_chr8_-_66754300 AK292680	-110027	-	NM_001242318	-110351	-	HQ258418 AK290801 BC058025 BC126360 NM_002603 U67932	-163068	-	NM_033105 BC016742 AF368276 AL133660	69500	+	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	175021	+	BC002599 BC011031 AK075431 NM_000756	226448	-	AK292680|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##HQ258418|PDE7A|5150|phosphodiesterase 7A##AK290801|PDE7A|5150|phosphodiesterase 7A##BC058025|PDE7A|5150|phosphodiesterase 7A##BC126360|PDE7A|5150|phosphodiesterase 7A##NM_002603|PDE7A|5150|phosphodiesterase 7A##U67932|PDE7A|5150|phosphodiesterase 7A##NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone	0.057843	
chr8	79764552	79764663	reg1020128.p2	4.775	+	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	-46959	-	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	-186287	+	NM_006823 NM_181839 S76965	-336272	+	NM_001199214 NM_007029	758441	+	TSC_hg19_v1_chr8_+_80523304 D50375	758701	+	AK299500 TSC_hg19_v1_chr8_+_80523339	758732	+	J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7##NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_001199214|STMN2|11075|stathmin-like 2##NM_007029|STMN2|11075|stathmin-like 2##D50375|STMN2|11075|stathmin-like 2##AK299500|STMN2|11075|stathmin-like 2	0.98963	CTCF.p2:-49:0.990
chr16	33294089	33294269	reg1023048.p2	4.774	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-32046	+	AL133588 NM_016212	-32665	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-88581	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	13361093	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	13361127	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	13428883	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.0	
chr1	112143640	112143819	reg1026196.p1	4.773	+	BC041707 BC064411 NM_001081976	-37150	-	NM_000677 NM_020683	-96987	-	TSC_hg19_v1_chr1_+_112016601 BC017973 NM_174896	-127131	+	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	18738	+	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	138226	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	154490	+	BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##BC017973|C1orf162|128346|chromosome 1 open reading frame 162##NM_174896|C1orf162|128346|chromosome 1 open reading frame 162##NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	0.0	
chr11	56289538	56289655	reg1029474.p1	4.773	+	NM_001005282 BC136978 BC136980	-30739	-	BC136982 BC136983 NM_001004742	-51583	-	NM_001004743	-58720	-	NM_001005245 BC136951 BC136953	21148	-	NM_001004741 BC140733	55633	-	NM_001004740	91381	-	NM_001005282|OR5M8|219484|olfactory receptor, family 5, subfamily M, member 8##BC136978|OR5M8|219484|olfactory receptor, family 5, subfamily M, member 8##BC136980|OR5M8|219484|olfactory receptor, family 5, subfamily M, member 8##BC136982|OR5M3|219482|olfactory receptor, family 5, subfamily M, member 3##BC136983|OR5M3|219482|olfactory receptor, family 5, subfamily M, member 3##NM_001004742|OR5M3|219482|olfactory receptor, family 5, subfamily M, member 3##NM_001004743|OR5M9|390162|olfactory receptor, family 5, subfamily M, member 9##NM_001005245|OR5M11|219487|olfactory receptor, family 5, subfamily M, member 11##BC136951|OR5M11|219487|olfactory receptor, family 5, subfamily M, member 11##BC136953|OR5M11|219487|olfactory receptor, family 5, subfamily M, member 11##NM_001004741|OR5M10|390167|olfactory receptor, family 5, subfamily M, member 10##BC140733|OR5M10|390167|olfactory receptor, family 5, subfamily M, member 10##NM_001004740|OR5M1|390168|olfactory receptor, family 5, subfamily M, member 1	0.997094	CTCF.p2:-12:0.997
chr2	211949903	211950079	reg1029616.p2	4.773	+	AK316425 NM_001122634 AK302778 AY317138	-491906	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-528602	+	NM_001122633 AB208800	-607573	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	1453324	-	AK301503 AF130863 NM_016260	2065064	-	BC028936 NM_001079526	2066341	-	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	0.98092	CTCF.p2:-5:0.981
chr3	25005406	25005523	reg1030134.p2	4.773	+	AY286470 TSC_hg19_v1_chr3_-_24536493	-468987	-	GQ456948 GQ456949 GQ869479 GQ919288 AY286469 AY286468 AY286465 AY286471 TSC_hg19_v1_chr3_-_24536294 AY286467 AY286466 AK096628 M26747 NM_000461 NM_001128176 NM_001128177 NM_001252634 X04707	-469220	-	TSC_hg19_v1_chr3_+_23987516 AK301925 NM_001145425	-1017902	+	TSC_hg19_v1_chr3_+_25469751 AF157483 NM_016152	464295	+	BC030234 NM_000965 TSC_hg19_v1_chr3_+_25469854 X07282 Y00291	464403	+	TSC_hg19_v1_chr3_+_25470068 BC060794 AK292032 AB590663 CU687428 AB307688 HQ692864	464680	+	AY286470|THRB|7068|thyroid hormone receptor, beta##GQ456948|THRB|7068|thyroid hormone receptor, beta##GQ456949|THRB|7068|thyroid hormone receptor, beta##GQ869479|THRB|7068|thyroid hormone receptor, beta##GQ919288|THRB|7068|thyroid hormone receptor, beta##AY286469|THRB|7068|thyroid hormone receptor, beta##AY286468|THRB|7068|thyroid hormone receptor, beta##AY286465|THRB|7068|thyroid hormone receptor, beta##AY286471|THRB|7068|thyroid hormone receptor, beta##AY286467|THRB|7068|thyroid hormone receptor, beta##AY286466|THRB|7068|thyroid hormone receptor, beta##AK096628|THRB|7068|thyroid hormone receptor, beta##M26747|THRB|7068|thyroid hormone receptor, beta##NM_000461|THRB|7068|thyroid hormone receptor, beta##NM_001128176|THRB|7068|thyroid hormone receptor, beta##NM_001128177|THRB|7068|thyroid hormone receptor, beta##NM_001252634|THRB|7068|thyroid hormone receptor, beta##X04707|THRB|7068|thyroid hormone receptor, beta##AK301925|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001145425|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##AF157483|RARB|5915|retinoic acid receptor, beta##NM_016152|RARB|5915|retinoic acid receptor, beta##BC030234|RARB|5915|retinoic acid receptor, beta##NM_000965|RARB|5915|retinoic acid receptor, beta##X07282|RARB|5915|retinoic acid receptor, beta##Y00291|RARB|5915|retinoic acid receptor, beta##BC060794|RARB|5915|retinoic acid receptor, beta##AK292032|RARB|5915|retinoic acid receptor, beta##AB307688|RARB|5915|retinoic acid receptor, beta##HQ692864|RARB|5915|retinoic acid receptor, beta	0.814695	CTCF.p2:-3:0.815
chr6	171000830	171000938	reg1031083.p1	4.773	+	AY948416 AY948417 AB587415 DQ893475 DQ896345 TSC_hg19_v1_chr6_-_170893696 S78085 BC082978 AK297343 BC008378 NM_001199462 NM_001199463 NM_001199464 BC067759 NM_001199461 NM_002598 NM_144781	-107155	-	NM_001172085 NM_003194 AK304648 TSC_hg19_v1_chr6_+_170863459 AK315222 BC110341 Z22828 AK298272 M55654 BC109054 BC109053	-137420	+	TSC_hg19_v1_chr6_-_170862392 AK058050 NM_002793	-138487	-	None	None	None	None	None	None	None	None	None	AY948416|PDCD2|5134|programmed cell death 2##AY948417|PDCD2|5134|programmed cell death 2##DQ893475|PDCD2|5134|programmed cell death 2##DQ896345|PDCD2|5134|programmed cell death 2##S78085|PDCD2|5134|programmed cell death 2##AK297343|PDCD2|5134|programmed cell death 2##BC008378|PDCD2|5134|programmed cell death 2##NM_001199462|PDCD2|5134|programmed cell death 2##NM_001199463|PDCD2|5134|programmed cell death 2##NM_001199464|PDCD2|5134|programmed cell death 2##BC067759|PDCD2|5134|programmed cell death 2##NM_001199461|PDCD2|5134|programmed cell death 2##NM_002598|PDCD2|5134|programmed cell death 2##NM_144781|PDCD2|5134|programmed cell death 2##NM_001172085|TBP|6908|TATA box binding protein##NM_003194|TBP|6908|TATA box binding protein##AK304648|TBP|6908|TATA box binding protein##AK315222|TBP|6908|TATA box binding protein##BC110341|TBP|6908|TATA box binding protein##Z22828|TBP|6908|TATA box binding protein##AK298272|TBP|6908|TATA box binding protein##M55654|TBP|6908|TATA box binding protein##BC109054|TBP|6908|TATA box binding protein##BC109053|TBP|6908|TATA box binding protein##AK058050|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1##NM_002793|PSMB1|5689|proteasome (prosome, macropain) subunit, beta type, 1	0.168637	
chr9	117988553	117988647	reg1030734.p1	4.773	+	AB022761 NM_017418	-84504	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-108127	-	AK313619 NM_001244 NM_001252290	-295726	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	927470	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	1460862	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	1461006	+	AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32	0.06956	
chr10	127786259	127786339	reg1029534.p1	4.772	+	NM_145235 BC024189 CR627249 TSC_hg19_v1_chr10_+_127585124 AY358154 AK304407 DQ786222	-201143	+	TSC_hg19_v1_chr10_-_127585056 BC068471	-201269	-	AK001751 AY064250 AF427340 NM_018180	-216432	-	AK291629 TSC_hg19_v1_chr10_-_128076950	290652	-	AY358878 AF023476 AF023477 TSC_hg19_v1_chr10_-_128077049 AK127856	290732	-	TSC_hg19_v1_chr10_-_128077062 BC060804	290765	-	NM_145235|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##BC024189|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##CR627249|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##AY358154|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##BC068471|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AK001751|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AY064250|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AF427340|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##NM_018180|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AK291629|ADAM12|8038|ADAM metallopeptidase domain 12##AY358878|ADAM12|8038|ADAM metallopeptidase domain 12##AF023476|ADAM12|8038|ADAM metallopeptidase domain 12##AF023477|ADAM12|8038|ADAM metallopeptidase domain 12##AK127856|ADAM12|8038|ADAM metallopeptidase domain 12##BC060804|ADAM12|8038|ADAM metallopeptidase domain 12	0.056422	
chr17	1418870	1418961	reg1000932.p1	4.772	+	U45973 TSC_hg19_v1_chr17_-_1413071	-5882	-	AB210015 AK172742 AK292910 TSC_hg19_v1_chr17_-_1395993 BC068013 NM_001080779	-22940	-	TSC_hg19_v1_chr17_-_1394974 NM_033375	-23970	-	TSC_hg19_v1_chr17_-_1419907 DQ892815 DQ896061 AB529166 AK297955 AK303907 AK307293 AB036829 AB036830 AK312585 BC004362	1051	-	TSC_hg19_v1_chr17_-_1420177 AK312844 NM_001135642 NM_016532 NM_130766	1264	-	BC082976 TSC_hg19_v1_chr17_-_1466077 BC027177 D30036 M73704 BC045108 BC068538 NM_006224	47167	-	U45973|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB210015|MYO1C|4641|myosin IC##AK172742|MYO1C|4641|myosin IC##AK292910|MYO1C|4641|myosin IC##BC068013|MYO1C|4641|myosin IC##NM_001080779|MYO1C|4641|myosin IC##NM_033375|MYO1C|4641|myosin IC##DQ892815|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ896061|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK297955|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK303907|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK307293|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036829|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036830|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312585|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC004362|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312844|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_001135642|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_016532|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_130766|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC082976|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC027177|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D30036|PITPNA|5306|phosphatidylinositol transfer protein, alpha##M73704|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC045108|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC068538|PITPNA|5306|phosphatidylinositol transfer protein, alpha##NM_006224|PITPNA|5306|phosphatidylinositol transfer protein, alpha	0.0	
chr21	43285734	43285881	reg1025264.p2	4.772	+	AK027424 TSC_hg19_v1_chr21_-_43187270	-98540	-	TSC_hg19_v1_chr21_-_43187213 EU832165 EU832259 BC035755 BC110617 BC110618 AB047783 AJ278016 NM_020639	-98585	-	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	-405724	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	13691	-	BC062323 AL833323 NM_199050	60982	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	88276	-	AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4##NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2	0.0	
chr3	119281431	119281610	reg1027903.p1	4.772	+	M27533 BC042665 AK292129 NM_005191	-3079	-	NM_016589 TSC_hg19_v1_chr3_+_119217393 AF139077 AL136622 AK026250 AK225954 AF210057 AL390077 AY358633 AL390090 BC012341 AB528090 AM393632 CU680290 CR457158 CR533524	-64047	+	TSC_hg19_v1_chr3_+_119187809 NM_152305 AY298903 BC030614 AK295984 AK301002 AK315367 AK222937 AF168711 BC048810 AY358581 AK075444 BC011871 CU688946 CU690580	-93695	+	TSC_hg19_v1_chr3_+_119298355 AK304560 AK291787	16875	+	BC063883 NM_001125 TSC_hg19_v1_chr3_+_119298606	17045	+	NM_001206960 NM_001206961 NM_015900 AK301880 AK222705 AK313519 BC035347 BC047703 U37591 AF035268 AF035269 AB527604 CU690470	35207	+	M27533|CD80|941|CD80 molecule##BC042665|CD80|941|CD80 molecule##AK292129|CD80|941|CD80 molecule##NM_005191|CD80|941|CD80 molecule##NM_016589|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF139077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL136622|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK026250|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK225954|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF210057|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AY358633|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390090|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##BC012341|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AM393632|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR457158|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR533524|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##NM_152305|POGLUT1|56983|protein O-glucosyltransferase 1##AY298903|POGLUT1|56983|protein O-glucosyltransferase 1##BC030614|POGLUT1|56983|protein O-glucosyltransferase 1##AK295984|POGLUT1|56983|protein O-glucosyltransferase 1##AK301002|POGLUT1|56983|protein O-glucosyltransferase 1##AK315367|POGLUT1|56983|protein O-glucosyltransferase 1##AK222937|POGLUT1|56983|protein O-glucosyltransferase 1##AF168711|POGLUT1|56983|protein O-glucosyltransferase 1##BC048810|POGLUT1|56983|protein O-glucosyltransferase 1##AY358581|POGLUT1|56983|protein O-glucosyltransferase 1##AK075444|POGLUT1|56983|protein O-glucosyltransferase 1##AK304560|ADPRH|141|ADP-ribosylarginine hydrolase##AK291787|ADPRH|141|ADP-ribosylarginine hydrolase##BC063883|ADPRH|141|ADP-ribosylarginine hydrolase##NM_001125|ADPRH|141|ADP-ribosylarginine hydrolase##NM_001206960|PLA1A|51365|phospholipase A1 member A##NM_001206961|PLA1A|51365|phospholipase A1 member A##NM_015900|PLA1A|51365|phospholipase A1 member A##AK301880|PLA1A|51365|phospholipase A1 member A##AK222705|PLA1A|51365|phospholipase A1 member A##AK313519|PLA1A|51365|phospholipase A1 member A##BC035347|PLA1A|51365|phospholipase A1 member A##BC047703|PLA1A|51365|phospholipase A1 member A##U37591|PLA1A|51365|phospholipase A1 member A##AF035268|PLA1A|51365|phospholipase A1 member A##AF035269|PLA1A|51365|phospholipase A1 member A	0.0	
chr4	38525637	38525817	reg1028199.p2	4.772	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-546710	+	AF095288 BC069114 BC069400 NM_006607	-563672	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-632938	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	140099	+	AF289565 TSC_hg19_v1_chr4_-_38666549	140762	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	258872	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr6	152011580	152011701	reg1025439.p2	4.772	+	NM_025059 BC060803 BC035003 AK225330 AK026958	-196422	+	AK298490 TSC_hg19_v1_chr6_+_151773653 AK310840 AL110241 BC011348 CU679902	-237998	+	AK022972 NM_024573	-238219	+	NM_001122742 U68068 AK309580 AB588629 AB588630	53	+	NM_001122741 AK293019 AK313644	115183	+	NM_001122740 U68067	116813	+	NM_025059|C6orf97|80129|chromosome 6 open reading frame 97##BC060803|C6orf97|80129|chromosome 6 open reading frame 97##BC035003|C6orf97|80129|chromosome 6 open reading frame 97##AK225330|C6orf97|80129|chromosome 6 open reading frame 97##AK026958|C6orf97|80129|chromosome 6 open reading frame 97##AK298490|C6orf211|79624|chromosome 6 open reading frame 211##AK310840|C6orf211|79624|chromosome 6 open reading frame 211##AL110241|C6orf211|79624|chromosome 6 open reading frame 211##BC011348|C6orf211|79624|chromosome 6 open reading frame 211##AK022972|C6orf211|79624|chromosome 6 open reading frame 211##NM_024573|C6orf211|79624|chromosome 6 open reading frame 211##NM_001122742|ESR1|2099|estrogen receptor 1##U68068|ESR1|2099|estrogen receptor 1##AK309580|ESR1|2099|estrogen receptor 1##AB588629|ESR1|2099|estrogen receptor 1##AB588630|ESR1|2099|estrogen receptor 1##NM_001122741|ESR1|2099|estrogen receptor 1##AK293019|ESR1|2099|estrogen receptor 1##AK313644|ESR1|2099|estrogen receptor 1##NM_001122740|ESR1|2099|estrogen receptor 1##U68067|ESR1|2099|estrogen receptor 1	0.0	
chr6	52528086	52528266	reg1003833.p1	4.772	+	AK095117 TSC_hg19_v1_chr6_+_52442225	-86002	+	TSC_hg19_v1_chr6_-_52441859 AK291751 AB621814 BC028121 NM_012288	-86325	-	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	-86418	-	TSC_hg19_v1_chr6_+_52529228 AK091117	1052	+	TSC_hg19_v1_chr6_+_52535913 NM_014051 AF239771 AK312063 BC015097 BC019328	7747	+	AK292602 AK313601 M16594 BC002895 NM_000846	100140	-	AK095117|FLJ37798|401264|uncharacterized LOC401264##AK291751|TRAM2|9697|translocation associated membrane protein 2##BC028121|TRAM2|9697|translocation associated membrane protein 2##NM_012288|TRAM2|9697|translocation associated membrane protein 2##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2##AK091117|LOC730101|730101|uncharacterized LOC730101##NM_014051|TMEM14A|28978|transmembrane protein 14A##AF239771|TMEM14A|28978|transmembrane protein 14A##AK312063|TMEM14A|28978|transmembrane protein 14A##BC015097|TMEM14A|28978|transmembrane protein 14A##BC019328|TMEM14A|28978|transmembrane protein 14A##AK292602|GSTA2|2939|glutathione S-transferase alpha 2##AK313601|GSTA2|2939|glutathione S-transferase alpha 2##M16594|GSTA2|2939|glutathione S-transferase alpha 2##BC002895|GSTA2|2939|glutathione S-transferase alpha 2##NM_000846|GSTA2|2939|glutathione S-transferase alpha 2	0.0	
chrX	123232101	123232202	reg1026635.p2	4.772	+	TSC_hg19_v1_chrX_+_123095638 BC001765	-136514	+	NM_001042750 NM_001042751 NM_006603 TSC_hg19_v1_chrX_+_123095573 AL831939 BX641002 CR749433 BX641003	-136578	+	TSC_hg19_v1_chrX_+_123094397 NM_001042749 AK098737 BX640970 AK298633 AK313559	-137627	+	AK026678 TSC_hg19_v1_chrX_+_123234596	2379	+	NM_001114937 NM_002351 AL023657 AK311645	248024	+	HE578281 BC140783 BC144542 BC144543 AF100772 NM_001163278 NM_001163279 NM_014253	865482	-	BC001765|STAG2|10735|stromal antigen 2##NM_001042750|STAG2|10735|stromal antigen 2##NM_001042751|STAG2|10735|stromal antigen 2##NM_006603|STAG2|10735|stromal antigen 2##AL831939|STAG2|10735|stromal antigen 2##BX641002|STAG2|10735|stromal antigen 2##CR749433|STAG2|10735|stromal antigen 2##BX641003|STAG2|10735|stromal antigen 2##NM_001042749|STAG2|10735|stromal antigen 2##AK098737|STAG2|10735|stromal antigen 2##BX640970|STAG2|10735|stromal antigen 2##AK298633|STAG2|10735|stromal antigen 2##AK313559|STAG2|10735|stromal antigen 2##AK026678|STAG2|10735|stromal antigen 2##NM_001114937|SH2D1A|4068|SH2 domain containing 1A##NM_002351|SH2D1A|4068|SH2 domain containing 1A##AL023657|SH2D1A|4068|SH2 domain containing 1A##AK311645|SH2D1A|4068|SH2 domain containing 1A##BC140783|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144542|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144543|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##AF100772|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163278|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163279|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_014253|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)	0.965949	CTCF.p2:-10:0.966
chr10	46167785	46167965	reg1013521.p1	4.771	+	TSC_hg19_v1_chr10_-_46090318 BC066988 NM_001002265 NM_145021	-77581	-	AK313340 BC025394 NM_001002266 AK307667	-137056	-	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	-298178	+	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	339	-	NM_001169106 NM_001169107 NM_015262 TSC_hg19_v1_chr10_+_46222703 AK291430 AB011164 BC150611 AK303048 AK293929 BC053887	54832	+	BC171820 BC171833 AF411132 NM_133446	175038	-	BC066988|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002265|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_145021|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK313340|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC025394|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002266|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK307667|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001169106|FAM21C|253725|family with sequence similarity 21, member C##NM_001169107|FAM21C|253725|family with sequence similarity 21, member C##NM_015262|FAM21C|253725|family with sequence similarity 21, member C##AK291430|FAM21C|253725|family with sequence similarity 21, member C##AB011164|FAM21C|253725|family with sequence similarity 21, member C##BC150611|FAM21C|253725|family with sequence similarity 21, member C##AK303048|FAM21C|253725|family with sequence similarity 21, member C##AK293929|FAM21C|253725|family with sequence similarity 21, member C##BC053887|FAM21C|253725|family with sequence similarity 21, member C##BC171833|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##AF411132|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4##NM_133446|AGAP4|119016|ArfGAP with GTPase domain, ankyrin repeat and PH domain 4	0.0	
chr15	47487061	47487156	reg1028001.p1	4.771	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	-10721	+	TSC_hg19_v1_chr15_+_45927245 AK222463 AF042284 NM_021199 AF151802 AK313111 BC016836	-1559859	+	TSC_hg19_v1_chr15_+_45879759 AK128626	-1607335	+	TSC_hg19_v1_chr15_+_48009541 AK290032	522480	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	523577	+	AF348468 NM_205850 BC110836 BC113628 BC113630 BC143950 DQ665306 DQ665307 HQ258279	926096	+	AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK222463|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF042284|SQRDL|58472|sulfide quinone reductase-like (yeast)##NM_021199|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF151802|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK313111|SQRDL|58472|sulfide quinone reductase-like (yeast)##BC016836|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK128626|PLDN|26258|pallidin homolog (mouse)##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF348468|SLC24A5|283652|solute carrier family 24, member 5##NM_205850|SLC24A5|283652|solute carrier family 24, member 5##BC113628|SLC24A5|283652|solute carrier family 24, member 5##BC113630|SLC24A5|283652|solute carrier family 24, member 5##BC143950|SLC24A5|283652|solute carrier family 24, member 5##DQ665306|SLC24A5|283652|solute carrier family 24, member 5##DQ665307|SLC24A5|283652|solute carrier family 24, member 5##HQ258279|SLC24A5|283652|solute carrier family 24, member 5	0.7883	CTCF.p2:-1:0.788
chr15	62164248	62164369	reg1031611.p1	4.771	+	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	-642811	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	-642884	-	U04899 U04898 NM_002943 NM_134260	-1244623	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	188306	-	NM_207322 AF504646	194880	+	NM_001007595	293173	-	NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B	0.309422	CTCF.p2:-8:0.309
chr19	1065029	1065129	reg1028327.p1	4.771	+	AK310127 TSC_hg19_v1_chr19_+_1040114 AK301108 AK310909	-24945	+	TSC_hg19_v1_chr19_+_1040105 NM_019112	-24987	+	AK024835 AK057960 AK293171 TSC_hg19_v1_chr19_+_1026627 BC141818 BC141833 D83735 AK222924 AK300788 D86059 BC148264 CR541810 CR541831 AY927510 AY927514	-38417	+	TSC_hg19_v1_chr19_+_1067170 BC065223 NM_012292	2064	+	AK304271 TSC_hg19_v1_chr19_+_1067315 AK304765 D86976	2247	+	TSC_hg19_v1_chr19_+_1067558 BC035564	2493	+	AK310127|ABCA7|10347|ATP-binding cassette, sub-family A (ABC1), member 7##AK301108|ABCA7|10347|ATP-binding cassette, sub-family A (ABC1), member 7##AK310909|ABCA7|10347|ATP-binding cassette, sub-family A (ABC1), member 7##NM_019112|ABCA7|10347|ATP-binding cassette, sub-family A (ABC1), member 7##AK024835|CNN2|1265|calponin 2##AK057960|CNN2|1265|calponin 2##AK293171|CNN2|1265|calponin 2##BC141818|CNN2|1265|calponin 2##BC141833|CNN2|1265|calponin 2##D83735|CNN2|1265|calponin 2##AK222924|CNN2|1265|calponin 2##AK300788|CNN2|1265|calponin 2##D86059|CNN2|1265|calponin 2##BC148264|CNN2|1265|calponin 2##CR541810|CNN2|1265|calponin 2##CR541831|CNN2|1265|calponin 2##AY927514|CNN2|1265|calponin 2##BC065223|HMHA1|23526|histocompatibility (minor) HA-1##NM_012292|HMHA1|23526|histocompatibility (minor) HA-1##AK304271|HMHA1|23526|histocompatibility (minor) HA-1##AK304765|HMHA1|23526|histocompatibility (minor) HA-1##D86976|HMHA1|23526|histocompatibility (minor) HA-1##BC035564|HMHA1|23526|histocompatibility (minor) HA-1	0.0	
chr3	54180826	54180932	reg1028312.p1	4.771	+	TSC_hg19_v1_chr3_+_54156691 AF516696 NM_018398	-24188	+	BC137502 BC137505 TSC_hg19_v1_chr3_+_54156614	-24280	+	TSC_hg19_v1_chr3_-_53925897 AF537132 AK289594 BC013162 AK123406 AF085359 AF161415 NM_021237	-254950	-	BC074741 AF225421 NM_020678	781137	-	TSC_hg19_v1_chr3_-_55514935 CU687936 AB590996 BC074783	1334065	-	TSC_hg19_v1_chr3_-_55515377 L20861	1334496	-	AF516696|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##NM_018398|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137502|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137505|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##AF537132|SELK|58515|selenoprotein K##AK289594|SELK|58515|selenoprotein K##BC013162|SELK|58515|selenoprotein K##AK123406|SELK|58515|selenoprotein K##AF085359|SELK|58515|selenoprotein K##AF161415|SELK|58515|selenoprotein K##NM_021237|SELK|58515|selenoprotein K##BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A##L20861|WNT5A|7474|wingless-type MMTV integration site family, member 5A	0.718771	CTCF.p2:-24:0.719
chr9	139661026	139661129	reg1028765.p1	4.771	+	BC093893 BC093895 AY358618 NM_203347	-2116	-	BC130465 BC132714 AK126902 NM_178469 BC042109	-8365	-	BC026910 AY301269 HQ257933 AY358598 AF303084 BC062746 NM_198946	-18136	-	TSC_hg19_v1_chr9_+_139685795 NM_032928 BC007834	24710	+	TSC_hg19_v1_chr9_+_139685818 CU675821	24757	+	NM_001039374 BC064582 BC137317 BC137318	29724	+	BC093893|LCN15|389812|lipocalin 15##BC093895|LCN15|389812|lipocalin 15##AY358618|LCN15|389812|lipocalin 15##NM_203347|LCN15|389812|lipocalin 15##BC130465|LCN8|138307|lipocalin 8##BC132714|LCN8|138307|lipocalin 8##AK126902|LCN8|138307|lipocalin 8##NM_178469|LCN8|138307|lipocalin 8##BC042109|LCN8|138307|lipocalin 8##AY301269|LCN6|158062|lipocalin 6##HQ257933|LCN6|158062|lipocalin 6##AY358598|LCN6|158062|lipocalin 6##AF303084|LCN6|158062|lipocalin 6##BC062746|LCN6|158062|lipocalin 6##NM_198946|LCN6|158062|lipocalin 6##NM_032928|TMEM141|85014|transmembrane protein 141##BC007834|TMEM141|85014|transmembrane protein 141##NM_001039374|KIAA1984|84960|KIAA1984##BC064582|KIAA1984|84960|KIAA1984##BC137317|KIAA1984|84960|KIAA1984##BC137318|KIAA1984|84960|KIAA1984	0.830069	CTCF.p2:-21:0.830
chrX	137108469	137108616	reg1031100.p1	4.771	+	EU532020 TSC_hg19_v1_chrX_+_136648691 BC113393 BC113395 AB464363 HQ258447	-459775	+	TSC_hg19_v1_chrX_+_136648313 AF028706 NM_003413	-460213	+	BC069439 NM_054021 CU686814	-994707	-	AF100143 TSC_hg19_v1_chrX_-_137793504 AK289960 BC034340	684912	-	BC012347 NM_004114 TSC_hg19_v1_chrX_-_137793839	685295	-	AF100144 NM_033642	712972	-	EU532020|ZIC3|7547|Zic family member 3##BC113393|ZIC3|7547|Zic family member 3##BC113395|ZIC3|7547|Zic family member 3##HQ258447|ZIC3|7547|Zic family member 3##AF028706|ZIC3|7547|Zic family member 3##NM_003413|ZIC3|7547|Zic family member 3##BC069439|GPR101|83550|G protein-coupled receptor 101##NM_054021|GPR101|83550|G protein-coupled receptor 101##AF100143|FGF13|2258|fibroblast growth factor 13##AK289960|FGF13|2258|fibroblast growth factor 13##BC034340|FGF13|2258|fibroblast growth factor 13##BC012347|FGF13|2258|fibroblast growth factor 13##NM_004114|FGF13|2258|fibroblast growth factor 13##AF100144|FGF13|2258|fibroblast growth factor 13##NM_033642|FGF13|2258|fibroblast growth factor 13	0.891943	CTCF.p2:29:0.892
chr21	43198529	43198652	reg1030080.p1	4.770	+	AK027424 TSC_hg19_v1_chr21_-_43187270	-11323	-	TSC_hg19_v1_chr21_-_43187213 EU832165 EU832259 BC035755 BC110617 BC110618 AB047783 AJ278016 NM_020639	-11368	-	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	-318507	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	100908	-	BC062323 AL833323 NM_199050	148199	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	175493	-	AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4##NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2	0.040107	
chr5	17219242	17219422	reg1024471.p3	4.770	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-1492	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-1720	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-282947	-	AK295087 BC031051 NM_001167667 NM_004934	2768990	-	TSC_hg19_v1_chr5_+_21459621 AK290693	4240277	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	4240316	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.0	
chr7	128603529	128603682	reg1026976.p2	4.770	+	EU258898 NM_001098627 DQ995494 AY504946 DQ277634	-22797	+	DQ995493 AY693669 BC004139 BC004201 DQ277633 NM_032643	-25347	+	AK293654 AY693665 AY693668 NM_001098629 NM_001098630 NM_001242452 DQ995492 U51127 AK297083 AY504947 AY693666 AY693667 EU258896	-25569	+	AJ133769 AF145029 TSC_hg19_v1_chr7_-_128694965 AK312580 BC068530	91290	-	TSC_hg19_v1_chr7_-_128695168 BC009923	91543	-	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	91600	-	EU258898|IRF5|3663|interferon regulatory factor 5##NM_001098627|IRF5|3663|interferon regulatory factor 5##DQ995494|IRF5|3663|interferon regulatory factor 5##AY504946|IRF5|3663|interferon regulatory factor 5##DQ277634|IRF5|3663|interferon regulatory factor 5##AY693669|IRF5|3663|interferon regulatory factor 5##BC004139|IRF5|3663|interferon regulatory factor 5##BC004201|IRF5|3663|interferon regulatory factor 5##DQ277633|IRF5|3663|interferon regulatory factor 5##NM_032643|IRF5|3663|interferon regulatory factor 5##AK293654|IRF5|3663|interferon regulatory factor 5##AY693665|IRF5|3663|interferon regulatory factor 5##AY693668|IRF5|3663|interferon regulatory factor 5##NM_001098629|IRF5|3663|interferon regulatory factor 5##NM_001098630|IRF5|3663|interferon regulatory factor 5##NM_001242452|IRF5|3663|interferon regulatory factor 5##DQ995492|IRF5|3663|interferon regulatory factor 5##U51127|IRF5|3663|interferon regulatory factor 5##AK297083|IRF5|3663|interferon regulatory factor 5##AY504947|IRF5|3663|interferon regulatory factor 5##AY693666|IRF5|3663|interferon regulatory factor 5##AY693667|IRF5|3663|interferon regulatory factor 5##EU258896|IRF5|3663|interferon regulatory factor 5##AJ133769|TNPO3|23534|transportin 3##AF145029|TNPO3|23534|transportin 3##AK312580|TNPO3|23534|transportin 3##BC068530|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3	0.0	
chr8	119132740	119132920	reg1002359.p1	4.770	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	-8869	-	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	-599788	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	-599872	+	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	501295	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	501377	-	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	831390	-	AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##NM_080651|MED30|90390|mediator complex subunit 30##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	0.0	
chr10	44179095	44179178	reg1029895.p1	4.769	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-34830	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-34931	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-77239	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	701363	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	1227582	+	AK056518 TSC_hg19_v1_chr10_-_45455156	1276011	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.452162	CTCF.p2:-2:0.432
chr1	154745252	154745381	reg1030405.p1	4.769	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-144851	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-144902	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-164616	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	86946	-	BX649146 TSC_hg19_v1_chr1_-_154840541	95185	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	97430	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.815852	CTCF.p2:-19:0.816
chr13	41566926	41567068	reg1027713.p1	4.769	+	AK304289 BC010575 BC030507 NM_001145353	-10609	-	DQ891709 DQ894886 AB385566 CU688886 TSC_hg19_v1_chr13_-_41556203	-10801	-	TSC_hg19_v1_chr13_-_41495877 AK096993 BC047078 BC020814	-71132	-	TSC_hg19_v1_chr13_-_41593453 M82882	26446	-	TSC_hg19_v1_chr13_-_41593499 NM_172373	26502	-	BX640798 TSC_hg19_v1_chr13_-_41635093	68088	-	AK304289|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##BC010575|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##BC030507|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##NM_001145353|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##DQ891709|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##DQ894886|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##AK096993|LOC100616668|100616668|TPTE2 pseudogene##BC047078|LOC100616668|100616668|TPTE2 pseudogene##BC020814|SUGT1P3|283507|suppressor of G2 allele of SKP1 (S. cerevisiae) pseudogene 3##M82882|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##NM_172373|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##BX640798|ELF1|1997|E74-like factor 1 (ets domain transcription factor)	0.151101	
chr5	178921003	178921183	reg1004779.p1	4.769	+	AK308213 NM_014244 NM_021599 TSC_hg19_v1_chr5_-_178772442	-148651	-	AJ003125 AB587330 TSC_hg19_v1_chr5_-_178772362	-148737	-	TSC_hg19_v1_chr5_+_178487382 BC063312 AF525463 NM_014594	-433624	+	TSC_hg19_v1_chr5_+_178977611 AF312367 NM_025158 AF361055	56525	+	TSC_hg19_v1_chr5_+_178977843 AB209507	56749	+	AK291926 NM_001040451 NM_001040452 BC032571 AK075021 TSC_hg19_v1_chr5_+_178986802	65656	+	AK308213|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##NM_014244|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##NM_021599|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##AJ003125|ADAMTS2|9509|ADAM metallopeptidase with thrombospondin type 1 motif, 2##BC063312|ZNF354C|30832|zinc finger protein 354C##AF525463|ZNF354C|30832|zinc finger protein 354C##NM_014594|ZNF354C|30832|zinc finger protein 354C##AF312367|RUFY1|80230|RUN and FYVE domain containing 1##NM_025158|RUFY1|80230|RUN and FYVE domain containing 1##AF361055|RUFY1|80230|RUN and FYVE domain containing 1##AB209507|RUFY1|80230|RUN and FYVE domain containing 1##AK291926|RUFY1|80230|RUN and FYVE domain containing 1##NM_001040451|RUFY1|80230|RUN and FYVE domain containing 1##NM_001040452|RUFY1|80230|RUN and FYVE domain containing 1##BC032571|RUFY1|80230|RUN and FYVE domain containing 1##AK075021|RUFY1|80230|RUN and FYVE domain containing 1	0.0	
chr7	104681750	104681843	reg1026194.p1	4.769	+	TSC_hg19_v1_chr7_+_104681423 AY157990	-382	+	TSC_hg19_v1_chr7_+_104654651 AY147037 NM_018682 NM_182931 BC053906 BC062583 BC009061 BC001296 BC142987 BC040004 AF519459 AK000940 BC040848	-27022	+	TSC_hg19_v1_chr7_-_104654534 BC017007 AK123476	-27294	-	TSC_hg19_v1_chr7_+_104752313 AY222296 AY438698	70582	+	BC035214 TSC_hg19_v1_chr7_-_104909496 U88666 NM_182691	227687	-	TSC_hg19_v1_chr7_-_105029265 AB489157	347469	-	AY157990|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY147037|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##NM_018682|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##NM_182931|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC053906|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC062583|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC009061|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC001296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC142987|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC040004|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AF519459|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AK000940|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC040848|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC017007|LOC100216545|100216545|uncharacterized LOC100216545##AK123476|LOC100216545|100216545|uncharacterized LOC100216545##AY222296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY438698|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##BC035214|SRPK2|6733|SRSF protein kinase 2##U88666|SRPK2|6733|SRSF protein kinase 2##NM_182691|SRPK2|6733|SRSF protein kinase 2	0.731215	CTCF.p2:16:0.731
chr12	129156234	129156331	reg1024494.p1	4.768	+	NM_001136103	-404335	+	NM_052907	-3345121	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-3606214	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	152161	-	BC043528 TSC_hg19_v1_chr12_+_129337985	181702	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	181805	+	NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.995156	CTCF.p2:3:0.995
chr16	20312078	20312259	reg1000778.p2	4.768	+	AB196529 AY635179 BC137237 BC137238 BC144547 NM_001002911 AK291384	-227081	-	AK295204 AF202640 TSC_hg19_v1_chr16_-_19896168 BC034467 AF181862 NM_016235 AK294680 AK075119 AK315989 AK296754	-416004	-	TSC_hg19_v1_chr16_-_19729532 BC117562 NM_001012991	-582681	-	U36221 AK312277 BX647831 BX648201 BX649067 BX648023 NM_001007240 NM_001007241 NM_001007242 NM_001502 CR749600	26685	-	AK127643 AK055722 AK091961 AK096043 AX747279 M15881 BC035975 AK127648 NM_001008389 NM_003361	51864	-	BC042607 BC044936 NM_174924 AK097476	103877	-	AB196529|GPR139|124274|G protein-coupled receptor 139##AY635179|GPR139|124274|G protein-coupled receptor 139##BC137237|GPR139|124274|G protein-coupled receptor 139##BC137238|GPR139|124274|G protein-coupled receptor 139##NM_001002911|GPR139|124274|G protein-coupled receptor 139##AK291384|GPR139|124274|G protein-coupled receptor 139##AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC117562|C16orf88|400506|chromosome 16 open reading frame 88##NM_001012991|C16orf88|400506|chromosome 16 open reading frame 88##U36221|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK312277|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX647831|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648201|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX649067|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648023|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007240|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007241|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007242|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001502|GP2|2813|glycoprotein 2 (zymogen granule membrane)##CR749600|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK127643|UMOD|7369|uromodulin##AK055722|UMOD|7369|uromodulin##AK091961|UMOD|7369|uromodulin##AK096043|UMOD|7369|uromodulin##M15881|UMOD|7369|uromodulin##BC035975|UMOD|7369|uromodulin##AK127648|UMOD|7369|uromodulin##NM_001008389|UMOD|7369|uromodulin##NM_003361|UMOD|7369|uromodulin##BC042607|PDILT|204474|protein disulfide isomerase-like, testis expressed##BC044936|PDILT|204474|protein disulfide isomerase-like, testis expressed##NM_174924|PDILT|204474|protein disulfide isomerase-like, testis expressed##AK097476|PDILT|204474|protein disulfide isomerase-like, testis expressed	0.0	
chr1	9485992	9486099	reg1026316.p1	4.768	+	TSC_hg19_v1_chr1_+_9415945 CU677397	-70099	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	-133076	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	-133108	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	113487	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	113591	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	162911	+	AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201	0.0	
chr2	201443700	201443810	reg1029588.p1	4.768	+	TSC_hg19_v1_chr2_+_201390929 NM_001160033 NM_001160046 NM_152524 AK095291 BC048349 BC110583 BX647433 AK302457 BC092412 AY094614	-52853	+	TSC_hg19_v1_chr2_-_201374792 BC059366 BC045189 AK290867 BC067755 AK055884 NM_152387	-68923	-	TSC_hg19_v1_chr2_+_201171424 AF193059 BC065817	-272306	+	TSC_hg19_v1_chr2_+_201450590 AK301052	6832	+	AB046692 NM_001159 TSC_hg19_v1_chr2_+_201450748 BC117179 BC117181	7029	+	AK297930 AK307738 TSC_hg19_v1_chr2_+_201474048	30242	+	NM_001160033|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_001160046|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_152524|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK095291|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC048349|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC110583|SGOL2|151246|shugoshin-like 2 (S. pombe)##BX647433|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK302457|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC092412|SGOL2|151246|shugoshin-like 2 (S. pombe)##AY094614|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC059366|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC045189|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK290867|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC067755|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK055884|KCTD18|130535|potassium channel tetramerisation domain containing 18##NM_152387|KCTD18|130535|potassium channel tetramerisation domain containing 18##AF193059|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC065817|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK301052|AOX1|316|aldehyde oxidase 1##AB046692|AOX1|316|aldehyde oxidase 1##NM_001159|AOX1|316|aldehyde oxidase 1##BC117179|AOX1|316|aldehyde oxidase 1##BC117181|AOX1|316|aldehyde oxidase 1##AK297930|AOX1|316|aldehyde oxidase 1##AK307738|AOX1|316|aldehyde oxidase 1	0.922497	CTCF.p2:-11:0.922
chr4	3049399	3049552	reg1007784.p2	4.768	+	TSC_hg19_v1_chr4_+_2965297 AK292390 AK223581 NM_001004056 NM_001004057 NM_182982 BC110825 BC027597 BC039732 BC117320 U33054 U33055 U33056 AK293569 X97879 X97880 X97881 X98118 HQ258463 X75897	-83940	+	TSC_hg19_v1_chr4_-_2965155 AK292939	-84281	-	BC053635 TSC_hg19_v1_chr4_-_2965134 BC017358 NM_003703	-84352	-	L12392 TSC_hg19_v1_chr4_+_3076416 AB016794 NM_002111	26852	+	AK126094 NM_001042690	201291	+	TSC_hg19_v1_chr4_+_3294763 AK310999 BC028154	245285	+	AK292390|GRK4|2868|G protein-coupled receptor kinase 4##AK223581|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004056|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004057|GRK4|2868|G protein-coupled receptor kinase 4##NM_182982|GRK4|2868|G protein-coupled receptor kinase 4##BC027597|GRK4|2868|G protein-coupled receptor kinase 4##BC117320|GRK4|2868|G protein-coupled receptor kinase 4##U33054|GRK4|2868|G protein-coupled receptor kinase 4##U33055|GRK4|2868|G protein-coupled receptor kinase 4##U33056|GRK4|2868|G protein-coupled receptor kinase 4##X97879|GRK4|2868|G protein-coupled receptor kinase 4##X97880|GRK4|2868|G protein-coupled receptor kinase 4##X97881|GRK4|2868|G protein-coupled receptor kinase 4##X98118|GRK4|2868|G protein-coupled receptor kinase 4##HQ258463|GRK4|2868|G protein-coupled receptor kinase 4##X75897|GRK4|2868|G protein-coupled receptor kinase 4##AK292939|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC053635|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC017358|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##NM_003703|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##L12392|HTT|3064|huntingtin##AB016794|HTT|3064|huntingtin##NM_002111|HTT|3064|huntingtin##AK126094|C4orf44|345222|chromosome 4 open reading frame 44##NM_001042690|C4orf44|345222|chromosome 4 open reading frame 44##AK310999|RGS12|6002|regulator of G-protein signaling 12##BC028154|RGS12|6002|regulator of G-protein signaling 12	0.082388	
chr6	12890573	12890667	reg1030424.p1	4.768	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-173577	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-173677	+	TSC_hg19_v1_chr6_+_12514301 D28417	-376318	+	AK091836 AX747210 NM_001242698	405197	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	438080	-	AK027010 NM_001242630	517748	-	AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr15	28769967	28770068	reg1029826.p1	4.767	+	AF071172 BC015486 BC142951 BC045544 NM_004667	-202746	-	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	-425584	-	NM_033223 BC029850 BC045709 S82769	-1553470	+	TSC_hg19_v1_chr15_+_29033278 AK302529	263306	+	TSC_hg19_v1_chr15_+_29077475 BC018626	307465	+	NM_001130414 NM_005503 AF047348 BC082986	443832	+	AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2##M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2	0.864445	CTCF.p2:5:0.836
chr2	147940012	147940114	reg1027671.p3	4.767	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-2662142	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-2662432	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-2664860	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	662054	+	TSC_hg19_v1_chr2_+_148602300 AK314124	662272	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	662582	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.0	
chr22	18275187	18275276	reg1025080.p1	4.767	+	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-17897	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-18008	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	-18024	-	TSC_hg19_v1_chr22_-_18484268 AK127487	208997	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	232030	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	285457	+	BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26	0.0	
chr6	106094310	106094400	reg1025782.p1	4.767	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-243360	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-243397	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-243509	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	439841	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	439880	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	452449	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.0	
chr8	55671462	55671596	reg1031081.p1	4.767	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	-142877	+	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	-301013	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-623718	+	BC106028 AY534241 NM_052898	343485	+	AF286340 NM_024831	1014216	+	AK308247 AK056932 NM_152417 BC020835 BC071636	1014368	-	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##AF286340|TGS1|96764|trimethylguanosine synthase 1##NM_024831|TGS1|96764|trimethylguanosine synthase 1##AK308247|TMEM68|137695|transmembrane protein 68##AK056932|TMEM68|137695|transmembrane protein 68##NM_152417|TMEM68|137695|transmembrane protein 68##BC020835|TMEM68|137695|transmembrane protein 68##BC071636|TMEM68|137695|transmembrane protein 68	0.0	
chrX	124780322	124780454	reg1030986.p1	4.766	+	NM_001195272	-326420	+	HE578281 BC140783 BC144542 BC144543 AF100772 NM_001163278 NM_001163279 NM_014253	-682755	-	NM_001114937 NM_002351 AL023657 AK311645	-1300213	+	BC136673 BC136674 NM_001013628	519691	-	TSC_hg19_v1_chrX_-_125686794 BC035674 NM_178470	906428	-	NM_001122716	1173358	+	NM_001195272|LOC100129520|100129520|testis expressed sequence 13-like##BC140783|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144542|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144543|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##AF100772|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163278|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163279|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_014253|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001114937|SH2D1A|4068|SH2 domain containing 1A##NM_002351|SH2D1A|4068|SH2 domain containing 1A##AL023657|SH2D1A|4068|SH2 domain containing 1A##AK311645|SH2D1A|4068|SH2 domain containing 1A##BC136673|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##BC136674|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##NM_001013628|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##BC035674|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##NM_178470|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##NM_001122716|CXorf64|100130613|chromosome X open reading frame 64	0.0	
chr16	29632079	29632158	reg1024997.p1	4.765	+	AB040413 AB055226 TSC_hg19_v1_chr16_-_29625045	-7076	-	TSC_hg19_v1_chr16_-_29606667 AK316536	-25445	-	CU687812 AK304513 TSC_hg19_v1_chr16_-_29606405	-25773	-	TSC_hg19_v1_chr16_+_29674283 NM_001030288 X60502 BC012350	42214	+	TSC_hg19_v1_chr16_+_29674567 AK292626 AK313750	42447	+	TSC_hg19_v1_chr16_+_29674568 J04168 J04536 NM_003123	42455	+	AK304513|LOC440354|440354|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene##NM_001030288|SPN|6693|sialophorin##X60502|SPN|6693|sialophorin##BC012350|SPN|6693|sialophorin##AK292626|SPN|6693|sialophorin##AK313750|SPN|6693|sialophorin##J04536|SPN|6693|sialophorin##NM_003123|SPN|6693|sialophorin	0.0	
chr1	90098206	90098296	reg1016289.p1	4.765	+	AF385436 NM_015350	-73980	+	TSC_hg19_v1_chr1_+_89990454 BC060782 BC030607	-107775	+	NM_001134476 TSC_hg19_v1_chr1_+_89990414	-107836	+	TSC_hg19_v1_chr1_+_90098630 BC036122	382	+	NM_032270 TSC_hg19_v1_chr1_+_90098643	394	+	TSC_hg19_v1_chr1_+_90098707 AK127881 AB081509 BC103929 BC113973	513	+	AF385436|LRRC8B|23507|leucine rich repeat containing 8 family, member B##NM_015350|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC060782|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC030607|LRRC8B|23507|leucine rich repeat containing 8 family, member B##NM_001134476|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C##AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C##AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C	0.0	
chr2	233973764	233973944	reg1021283.p1	4.765	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-48738	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-48795	+	BC069151 BC107053 NM_005383	-76473	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	186412	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	186469	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	186503	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.954174	CTCF.p2:-37:0.954
chr6	119655023	119655121	reg1026407.p1	4.765	+	BX538186 AK091682 AX747126 NM_001100411	-184726	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-255164	-	CU687406 AB385245 EU832813 GQ129264 TSC_hg19_v1_chr6_-_119399478	-255648	-	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	15849	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	2000571	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	2101753	+	BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##EU832813|FAM184A|79632|family with sequence similarity 184, member A##GQ129264|FAM184A|79632|family with sequence similarity 184, member A##BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa	0.0	
chr18	51225418	51225534	reg1028355.p2	4.764	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-1358363	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-1358935	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-2501436	-	TSC_hg19_v1_chr18_-_51690988 AL110266	465516	-	AF072246 TSC_hg19_v1_chr18_-_51750614	525061	-	TSC_hg19_v1_chr18_-_51750997 BC032638	525489	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	1.117765	CTCF.p2:-1:0.997
chr6	2953069	2953168	reg1018103.p2	4.764	+	TSC_hg19_v1_chr6_-_2903544 BC002538 AB060690 L40378 AK314842 NM_004155	-49610	-	TSC_hg19_v1_chr6_-_2842202 AK304641 AK309765	-110921	-	TSC_hg19_v1_chr6_-_2842095 BC009015 NM_030666 M93056 AK298044 AK312973 AK223370 AK291327	-111036	-	AK098566 TSC_hg19_v1_chr6_-_2971511	18296	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	18693	-	TSC_hg19_v1_chr6_-_2971981 AK314578	18931	-	BC002538|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AB060690|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##L40378|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK314842|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##NM_004155|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK304641|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK309765|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK098566|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314578|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6	1.054969	CTCF.p2:-5:0.912
chr11	86667041	86667127	reg1026087.p2	4.763	+	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	-696	-	TSC_hg19_v1_chr11_-_86666094 AY462097	-977	-	NM_007173 TSC_hg19_v1_chr11_+_86511583 AK316508 AK075362 AK315562 AK304301 AK304054 BC063022 AL136914 BC001278 AF015287 AF193611 AY359033	-155532	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	81894	+	AK024853 TSC_hg19_v1_chr11_+_87032449	365358	+	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	1241508	-	BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##AY462097|FZD4|8322|frizzled family receptor 4##NM_007173|PRSS23|11098|protease, serine, 23##AK075362|PRSS23|11098|protease, serine, 23##AK315562|PRSS23|11098|protease, serine, 23##AK304301|PRSS23|11098|protease, serine, 23##AK304054|PRSS23|11098|protease, serine, 23##AL136914|PRSS23|11098|protease, serine, 23##BC001278|PRSS23|11098|protease, serine, 23##AF015287|PRSS23|11098|protease, serine, 23##AF193611|PRSS23|11098|protease, serine, 23##AY359033|PRSS23|11098|protease, serine, 23##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##AK024853|TMEM135|65084|transmembrane protein 135##BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family	0.0	
chr16	68072094	68072188	reg1028523.p2	4.763	+	NM_018380	-14372	-	AK290578 TSC_hg19_v1_chr16_+_68057186 AB101210 AK296663 AK000406 BC006527 NM_017803	-14966	+	TSC_hg19_v1_chr16_-_68057129 BC014517	-15013	-	TSC_hg19_v1_chr16_+_68119279 NM_004555 NM_173163 NM_173165	47113	+	TSC_hg19_v1_chr16_+_68119335 AB209824	47197	+	TSC_hg19_v1_chr16_+_68119350 L41067	47228	+	NM_018380|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##AK290578|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AB101210|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK296663|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK000406|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC006527|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##NM_017803|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC014517|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##NM_004555|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173163|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173165|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##AB209824|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##L41067|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	0.0	
chr21	47343220	47343349	reg1028617.p1	4.763	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	-73396	+	TSC_hg19_v1_chr21_+_47063638 AK310131	-279655	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-380952	-	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	58401	+	TSC_hg19_v1_chr21_+_47518062 NM_001849 NM_058174 NM_058175 BC065509	174766	+	AY029208 EU832113 EU832207 TSC_hg19_v1_chr21_+_47531438	188119	+	AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##AK310131|PCBP3|54039|poly(rC) binding protein 3##U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1##NM_001849|COL6A2|1292|collagen, type VI, alpha 2##NM_058174|COL6A2|1292|collagen, type VI, alpha 2##NM_058175|COL6A2|1292|collagen, type VI, alpha 2##BC065509|COL6A2|1292|collagen, type VI, alpha 2##AY029208|COL6A2|1292|collagen, type VI, alpha 2##EU832113|COL6A2|1292|collagen, type VI, alpha 2##EU832207|COL6A2|1292|collagen, type VI, alpha 2	0.609956	CTCF.p2:0:0.610
chr3	128384310	128384442	reg1027985.p1	4.763	+	TSC_hg19_v1_chr3_-_128369724 NM_002950	-14638	-	TSC_hg19_v1_chr3_-_128369662 AK297941 AK312369 AK296905 CR749284 BC010839 AK223595	-14694	-	BC007995 TSC_hg19_v1_chr3_-_128369648 CR456742 AB527671 CU679817	-14790	-	AK297513 TSC_hg19_v1_chr3_-_128399968	15569	-	NM_004637 TSC_hg19_v1_chr3_+_128444978	60606	+	TSC_hg19_v1_chr3_+_128445025 AK094449	60648	+	NM_002950|RPN1|6184|ribophorin I##AK297941|RPN1|6184|ribophorin I##AK312369|RPN1|6184|ribophorin I##AK296905|RPN1|6184|ribophorin I##CR749284|RPN1|6184|ribophorin I##BC010839|RPN1|6184|ribophorin I##AK223595|RPN1|6184|ribophorin I##BC007995|RPN1|6184|ribophorin I##CR456742|RPN1|6184|ribophorin I##AK297513|RPN1|6184|ribophorin I##NM_004637|RAB7A|7879|RAB7A, member RAS oncogene family##AK094449|RAB7A|7879|RAB7A, member RAS oncogene family	0.0	
chr1	249238642	249238801	reg1029197.p2	4.762	+	TSC_hg19_v1_chr1_+_249200433 AK123219 BC063785 NM_001017434 NM_170725 BX647065 AK298248	-38298	+	TSC_hg19_v1_chr1_-_249153285 NM_001193328 NM_017865	-85419	-	AK309421 AL133100 TSC_hg19_v1_chr1_-_249153150 AK302187 NM_001136036 AK001070 AK298899 BC002948 AK000538 AK225535	-85633	-	None	None	None	None	None	None	None	None	None	AK123219|PGBD2|267002|piggyBac transposable element derived 2##BC063785|PGBD2|267002|piggyBac transposable element derived 2##NM_001017434|PGBD2|267002|piggyBac transposable element derived 2##NM_170725|PGBD2|267002|piggyBac transposable element derived 2##BX647065|PGBD2|267002|piggyBac transposable element derived 2##AK298248|PGBD2|267002|piggyBac transposable element derived 2##NM_001193328|ZNF692|55657|zinc finger protein 692##NM_017865|ZNF692|55657|zinc finger protein 692##AK309421|ZNF692|55657|zinc finger protein 692##AL133100|ZNF692|55657|zinc finger protein 692##AK302187|ZNF692|55657|zinc finger protein 692##NM_001136036|ZNF692|55657|zinc finger protein 692##AK001070|ZNF692|55657|zinc finger protein 692##AK298899|ZNF692|55657|zinc finger protein 692##BC002948|ZNF692|55657|zinc finger protein 692##AK000538|ZNF692|55657|zinc finger protein 692##AK225535|ZNF692|55657|zinc finger protein 692	1.754169	CTCF.p2:27:0.675	CTCF.p2:85:0.999
chr20	42657880	42657963	reg1023660.p2	4.762	+	NM_001098798	-83386	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	-113128	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	-114434	+	AL132999 TSC_hg19_v1_chr20_-_42815818 AK304863	157872	-	BC029957 NM_020433 NM_175913	158296	-	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	181435	-	NM_001098798|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##AL132999|JPH2|57158|junctophilin 2##AK304863|JPH2|57158|junctophilin 2##BC029957|JPH2|57158|junctophilin 2##NM_020433|JPH2|57158|junctophilin 2##NM_175913|JPH2|57158|junctophilin 2##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111	0.0	
chr3	45946641	45946817	reg1030014.p2	4.762	+	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	-18674	+	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	-63134	-	TSC_hg19_v1_chr3_-_45838112 AF125107	-108581	-	NM_006564 Y13248	38243	+	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	90592	-	AB189434 AB189435 NM_001024644 NM_005283	122249	-	NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1	0.0	
chr8	65311944	65312061	reg1028930.p2	4.762	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-1230802	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-1230858	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-1313375	-	NM_152414 AK293979	180856	+	TSC_hg19_v1_chr8_+_65493611 AK091333	181662	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	399277	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.638178	CTCF.p2:1:0.638
chr11	36331479	36331565	reg1032679.p2	4.761	+	NM_001160167 AK055042	-13742	+	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	-20536	-	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	-20569	-	NM_001160168 NM_024841 BX640959 AK024275	66038	+	NM_001160169	91024	+	TSC_hg19_v1_chr11_-_36531820 U78798 BC031052 AK292978 NM_004620 NM_145803	200292	-	NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##NM_001160168|PRR5L|79899|proline rich 5 like##NM_024841|PRR5L|79899|proline rich 5 like##BX640959|PRR5L|79899|proline rich 5 like##AK024275|PRR5L|79899|proline rich 5 like##NM_001160169|PRR5L|79899|proline rich 5 like##U78798|TRAF6|7189|TNF receptor-associated factor 6##BC031052|TRAF6|7189|TNF receptor-associated factor 6##AK292978|TRAF6|7189|TNF receptor-associated factor 6##NM_004620|TRAF6|7189|TNF receptor-associated factor 6##NM_145803|TRAF6|7189|TNF receptor-associated factor 6	0.0	
chr11	64073497	64073674	reg1028611.p1	4.761	+	TSC_hg19_v1_chr11_+_64073040 L38487 NM_004451 BC063795 BC073956	-517	+	AL117564 NM_001039496 AM392988 AB590987	-5714	+	TSC_hg19_v1_chr11_+_64058772 AK309443 NM_033310 BC067791 AF259500 AK296021	-14754	+	TSC_hg19_v1_chr11_-_64085009 AK312050 DQ892261 DQ895463 BC105294 BC029482 BC017172 AF161501 AF229068 NM_016404	11436	-	BC110983 NM_012094 NM_181651 NM_181652 TSC_hg19_v1_chr11_+_64085600 AF197952	11994	+	TSC_hg19_v1_chr11_+_64085676 AF124993 AF110731 BC113723 BC113725 BC143849 BC171733 AF112212 AF242525 AF231705 CR457203 HQ258129 AJ249483	12137	+	L38487|ESRRA|2101|estrogen-related receptor alpha##NM_004451|ESRRA|2101|estrogen-related receptor alpha##BC063795|ESRRA|2101|estrogen-related receptor alpha##BC073956|ESRRA|2101|estrogen-related receptor alpha##AL117564|C11orf20|25858|chromosome 11 open reading frame 20##NM_001039496|C11orf20|25858|chromosome 11 open reading frame 20##AM392988|C11orf20|25858|chromosome 11 open reading frame 20##AK309443|KCNK4|50801|potassium channel, subfamily K, member 4##NM_033310|KCNK4|50801|potassium channel, subfamily K, member 4##BC067791|KCNK4|50801|potassium channel, subfamily K, member 4##AF259500|KCNK4|50801|potassium channel, subfamily K, member 4##AK296021|KCNK4|50801|potassium channel, subfamily K, member 4##AK312050|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ892261|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ895463|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC105294|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC029482|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC017172|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF161501|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF229068|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##NM_016404|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC110983|PRDX5|25824|peroxiredoxin 5##NM_012094|PRDX5|25824|peroxiredoxin 5##NM_181651|PRDX5|25824|peroxiredoxin 5##NM_181652|PRDX5|25824|peroxiredoxin 5##AF197952|PRDX5|25824|peroxiredoxin 5##AF124993|PRDX5|25824|peroxiredoxin 5##AF110731|PRDX5|25824|peroxiredoxin 5##BC113723|PRDX5|25824|peroxiredoxin 5##BC113725|PRDX5|25824|peroxiredoxin 5##BC143849|PRDX5|25824|peroxiredoxin 5##BC171733|PRDX5|25824|peroxiredoxin 5##AF112212|PRDX5|25824|peroxiredoxin 5##AF242525|PRDX5|25824|peroxiredoxin 5##AF231705|PRDX5|25824|peroxiredoxin 5##CR457203|PRDX5|25824|peroxiredoxin 5##HQ258129|PRDX5|25824|peroxiredoxin 5##AJ249483|PRDX5|25824|peroxiredoxin 5	0.474909	CTCF.p2:0:0.475
chr13	51375396	51375518	reg1002894.p1	4.761	+	AJ412041 AJ412042 AJ412043 TSC_hg19_v1_chr13_+_50760088	-615404	+	TSC_hg19_v1_chr13_-_50699781 AF380424	-675642	-	AJ412023 AJ412024 AJ412025 AJ412026 AJ412038 AJ412039 AJ412054 AJ412055 AJ412056 AJ412057 AJ412058 AJ412059 AJ412060 AJ412061 AJ412062 Y15227 TSC_hg19_v1_chr13_+_50656364 BC004131 AK312167 BC020692 AK095311	-719112	+	AY357595 BC104892 BC112009 NM_198989 AK303567 AK126830	42495	-	NM_001142279 NM_024570 TSC_hg19_v1_chr13_+_51483898	108399	+	TSC_hg19_v1_chr13_+_51483905 AY764036	108447	+	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AJ412023|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412024|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412061|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412062|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##Y15227|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC020692|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AK095311|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7##AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_001142279|RNASEH2B|79621|ribonuclease H2, subunit B##NM_024570|RNASEH2B|79621|ribonuclease H2, subunit B##AY764036|RNASEH2B|79621|ribonuclease H2, subunit B	0.0	
chr2	231849264	231849428	reg1029132.p1	4.761	+	BC032694 NM_005683	-59406	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-119624	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-119668	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	11546	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	52891	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	72231	+	BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.243092	CTCF.p2:2:0.243
chr22	42793246	42793426	reg1021090.p2	4.761	+	BC038245 TSC_hg19_v1_chr22_-_42765218	-28134	-	AB527391 NM_005650 NM_181492	-181959	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	-266455	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	35045	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	122431	-	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	122478	-	NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)	0.0	
chrX	91025945	91026040	reg1028634.p1	4.761	+	NM_080832	-336396	+	BC117398 BC117400 NM_138960 BC101144 BC101145 AF497480 BC029920 AB464725 HQ258115	-1848981	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	-3023752	+	NM_032967 AJ276804 AJ564847 AK299638 AK299813 AK316263 TSC_hg19_v1_chrX_+_91034373	8325	+	AB026187 AF332218 AF332219 AJ564932 NM_014522 NM_032968 NM_032969	63666	+	AJ564931 NM_001168360 NM_001168361 NM_001168362 NM_001168363 AF206516 AF217288 AY861432 AY861433 AY861434 AY861435	64489	+	NM_080832|PABPC5|140886|poly(A) binding protein, cytoplasmic 5##BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1##NM_032967|PCDH11X|27328|protocadherin 11 X-linked##AJ276804|PCDH11X|27328|protocadherin 11 X-linked##AJ564847|PCDH11X|27328|protocadherin 11 X-linked##AK299813|PCDH11X|27328|protocadherin 11 X-linked##AK316263|PCDH11X|27328|protocadherin 11 X-linked##AB026187|PCDH11X|27328|protocadherin 11 X-linked##AF332218|PCDH11X|27328|protocadherin 11 X-linked##AF332219|PCDH11X|27328|protocadherin 11 X-linked##AJ564932|PCDH11X|27328|protocadherin 11 X-linked##NM_014522|PCDH11X|27328|protocadherin 11 X-linked##NM_032968|PCDH11X|27328|protocadherin 11 X-linked##NM_032969|PCDH11X|27328|protocadherin 11 X-linked##AJ564931|PCDH11X|27328|protocadherin 11 X-linked##NM_001168360|PCDH11X|27328|protocadherin 11 X-linked##NM_001168361|PCDH11X|27328|protocadherin 11 X-linked##NM_001168362|PCDH11X|27328|protocadherin 11 X-linked##NM_001168363|PCDH11X|27328|protocadherin 11 X-linked##AF206516|PCDH11X|27328|protocadherin 11 X-linked##AF217288|PCDH11X|27328|protocadherin 11 X-linked##AY861432|PCDH11X|27328|protocadherin 11 X-linked##AY861433|PCDH11X|27328|protocadherin 11 X-linked##AY861434|PCDH11X|27328|protocadherin 11 X-linked##AY861435|PCDH11X|27328|protocadherin 11 X-linked	0.993608	CTCF.p2:11:0.979
chr11	45255126	45255243	reg1028052.p2	4.760	+	AF275818 NM_020229	-139621	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	-282767	-	TSC_hg19_v1_chr11_-_44956087 AF010315	-299077	-	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	52566	-	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	432000	-	NM_001145265 NM_001145266	570438	+	AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_001145265|SLC35C1|55343|solute carrier family 35, member C1##NM_001145266|SLC35C1|55343|solute carrier family 35, member C1	0.062238	
chr15	49663160	49663244	reg1027378.p2	4.760	+	TSC_hg19_v1_chr15_+_49462423 NM_002044 AK301361 BC005141 AK098049 AK316440 M84443 BT006901 CU675015 DQ890583 DQ893742	-200739	+	TSC_hg19_v1_chr15_+_49447990 AF461816 AL832745 NM_001001556	-215211	+	AF120268 L40388 TSC_hg19_v1_chr15_-_49447811 AB462991 CR542063 CU680378 EU446744 EU831466 EU831553 AK222590 AB209799 AF100762 AF212227 AF084260 BC012629 AK312643 AK295598 NM_001143887 NM_004236	-215393	-	NM_002009 BC010956 AK313160 M60828 S81661	52214	+	BC048125 BC048139 AK057362 NM_152647	249881	-	TSC_hg19_v1_chr15_+_49913254 NM_001144955 NM_020234 BC018028 AF168717 AK290184 BC093073 BC032535	250047	+	NM_002044|GALK2|2585|galactokinase 2##AK301361|GALK2|2585|galactokinase 2##BC005141|GALK2|2585|galactokinase 2##AK098049|GALK2|2585|galactokinase 2##AK316440|GALK2|2585|galactokinase 2##M84443|GALK2|2585|galactokinase 2##BT006901|GALK2|2585|galactokinase 2##DQ890583|GALK2|2585|galactokinase 2##DQ893742|GALK2|2585|galactokinase 2##AF461816|GALK2|2585|galactokinase 2##AL832745|GALK2|2585|galactokinase 2##NM_001001556|GALK2|2585|galactokinase 2##AF120268|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##L40388|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##CR542063|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU446744|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831466|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831553|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK222590|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AB209799|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF100762|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF212227|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF084260|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##BC012629|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK312643|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK295598|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_001143887|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_004236|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_002009|FGF7|2252|fibroblast growth factor 7##BC010956|FGF7|2252|fibroblast growth factor 7##AK313160|FGF7|2252|fibroblast growth factor 7##M60828|FGF7|2252|fibroblast growth factor 7##S81661|FGF7|2252|fibroblast growth factor 7##BC048125|C15orf33|196951|chromosome 15 open reading frame 33##BC048139|C15orf33|196951|chromosome 15 open reading frame 33##AK057362|C15orf33|196951|chromosome 15 open reading frame 33##NM_152647|C15orf33|196951|chromosome 15 open reading frame 33##NM_001144955|DTWD1|56986|DTW domain containing 1##NM_020234|DTWD1|56986|DTW domain containing 1##BC018028|DTWD1|56986|DTW domain containing 1##AF168717|DTWD1|56986|DTW domain containing 1##AK290184|DTWD1|56986|DTW domain containing 1##BC093073|DTWD1|56986|DTW domain containing 1##BC032535|DTWD1|56986|DTW domain containing 1	0.236223	CTCF.p2:3:0.236
chr15	93352733	93352914	reg1007412.p2	4.760	+	BC110328 TSC_hg19_v1_chr15_-_93277463	-75434	-	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	-153944	-	AK057393 NM_153040	-337917	+	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	90663	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	90757	+	AK295909 TSC_hg19_v1_chr15_+_93447798	94937	+	BC110328|FAM174B|400451|family with sequence similarity 174, member B##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2##AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2	0.0	
chr18	41176220	41176315	reg1026271.p2	4.760	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-318838	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-480698	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-1641034	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	1083847	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	1084601	+	NM_001242692 AK292422	1616685	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.994118	CTCF.p2:3:0.994
chr19	1383800	1383894	reg1028309.p2	4.760	+	TSC_hg19_v1_chr19_+_1354979 NM_032853 AK310721 U20897	-28846	+	TSC_hg19_v1_chr19_+_1286081 AJ007292 NM_001405 AB463609	-97882	+	TSC_hg19_v1_chr19_+_1275540 NM_017914 BC000890 BC012080	-108280	+	TSC_hg19_v1_chr19_+_1383882 AK092169 AX747389 NM_024407 AK128713	39	+	AK293917 AK297611 TSC_hg19_v1_chr19_+_1383902 AF115969 AK091623 AK127759 AX747100	53	+	TSC_hg19_v1_chr19_+_1383905 AK222738 BC005954 AF060512	63	+	NM_032853|MUM1|84939|melanoma associated antigen (mutated) 1##AK310721|MUM1|84939|melanoma associated antigen (mutated) 1##U20897|MUM1|84939|melanoma associated antigen (mutated) 1##AJ007292|EFNA2|1943|ephrin-A2##NM_001405|EFNA2|1943|ephrin-A2##NM_017914|C19orf24|55009|chromosome 19 open reading frame 24##BC000890|C19orf24|55009|chromosome 19 open reading frame 24##BC012080|C19orf24|55009|chromosome 19 open reading frame 24##AK092169|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##NM_024407|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK128713|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK293917|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AF115969|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK091623|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK127759|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK222738|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##BC005954|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AF060512|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)	0.0	
chr2	55276152	55276321	reg1030629.p1	4.760	+	AJ251385 AM392753 AM393122 AM393280 AM393537 BC139928 DQ778739 AF087901 BC014366 TSC_hg19_v1_chr2_-_55237387 BC007109 AF177332 AF132048 BC001035 AF077050 AF125103 NM_007008 AY102276	-38864	-	TSC_hg19_v1_chr2_-_55199899 BC131571	-76328	-	NM_001039753	-324088	+	AK302741 AF333336 NM_207521 AY123248	74	-	TSC_hg19_v1_chr2_-_55277421 AF320999 AJ251383 AJ251384 CU687182 AM393104 AM393557 BC010737	1195	-	TSC_hg19_v1_chr2_-_55277585 AK130812 AB015639 BC071848 AB020693 BC152425 AF148537 AF148538 AK098385 BC012619	1286	-	AJ251385|RTN4|57142|reticulon 4##AM392753|RTN4|57142|reticulon 4##AM393122|RTN4|57142|reticulon 4##AM393280|RTN4|57142|reticulon 4##AM393537|RTN4|57142|reticulon 4##BC139928|RTN4|57142|reticulon 4##DQ778739|RTN4|57142|reticulon 4##AF087901|RTN4|57142|reticulon 4##BC014366|RTN4|57142|reticulon 4##BC007109|RTN4|57142|reticulon 4##AF177332|RTN4|57142|reticulon 4##AF132048|RTN4|57142|reticulon 4##BC001035|RTN4|57142|reticulon 4##AF077050|RTN4|57142|reticulon 4##AF125103|RTN4|57142|reticulon 4##NM_007008|RTN4|57142|reticulon 4##AY102276|RTN4|57142|reticulon 4##NM_001039753|EML6|400954|echinoderm microtubule associated protein like 6##AK302741|RTN4|57142|reticulon 4##AF333336|RTN4|57142|reticulon 4##NM_207521|RTN4|57142|reticulon 4##AY123248|RTN4|57142|reticulon 4##AF320999|RTN4|57142|reticulon 4##AJ251383|RTN4|57142|reticulon 4##AJ251384|RTN4|57142|reticulon 4##AM393104|RTN4|57142|reticulon 4##AM393557|RTN4|57142|reticulon 4##BC010737|RTN4|57142|reticulon 4##AK130812|RTN4|57142|reticulon 4##AB015639|RTN4|57142|reticulon 4##BC071848|RTN4|57142|reticulon 4##AB020693|RTN4|57142|reticulon 4##BC152425|RTN4|57142|reticulon 4##AF148537|RTN4|57142|reticulon 4##AF148538|RTN4|57142|reticulon 4##AK098385|RTN4|57142|reticulon 4##BC012619|RTN4|57142|reticulon 4	0.0	
chr7	147983407	147983545	reg1029161.p2	4.760	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-2169592	+	NM_014141	-2170024	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-3450340	-	TSC_hg19_v1_chr7_+_148036552 CR933671	53089	+	BC021251 NM_145304	304180	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	412464	+	AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##CR933671|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1	0.394183	CTCF.p2:-29:0.394
chr9	134148529	134148685	reg1031736.p1	4.760	+	TSC_hg19_v1_chr9_+_134001016 D14689 AB159230	-147557	+	TSC_hg19_v1_chr9_+_134000975 BC105998 AK307573 NM_005085 AL832609 X64228 BC045620 BC012500	-147633	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	-176649	+	BC049388 NM_033387 AK095423	3312	-	TSC_hg19_v1_chr9_+_134165108 AK075207 NM_032728 BC006362 AK027568 AK315502 AB385550	16621	+	TSC_hg19_v1_chr9_+_134269515 BC002872	120959	+	D14689|NUP214|8021|nucleoporin 214kDa##AB159230|NUP214|8021|nucleoporin 214kDa##BC105998|NUP214|8021|nucleoporin 214kDa##AK307573|NUP214|8021|nucleoporin 214kDa##NM_005085|NUP214|8021|nucleoporin 214kDa##AL832609|NUP214|8021|nucleoporin 214kDa##X64228|NUP214|8021|nucleoporin 214kDa##BC045620|NUP214|8021|nucleoporin 214kDa##BC012500|NUP214|8021|nucleoporin 214kDa##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like##BC049388|FAM78A|286336|family with sequence similarity 78, member A##NM_033387|FAM78A|286336|family with sequence similarity 78, member A##AK095423|FAM78A|286336|family with sequence similarity 78, member A##AK075207|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##NM_032728|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC006362|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK027568|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK315502|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC002872|PRRC2B|84726|proline-rich coiled-coil 2B	0.0	
chrX	118525404	118525474	reg1024256.p1	4.760	+	TSC_hg19_v1_chrX_+_118370247 NM_006667 AK313956 Y12711 BC034238 AK293618 DQ891774 DQ894958 CR456993	-155174	+	NM_020721	-240898	-	TSC_hg19_v1_chrX_+_118109314 AK026265	-416101	+	NM_145305 TSC_hg19_v1_chrX_+_118533308 AK094254 BC071871	7848	+	TSC_hg19_v1_chrX_+_118533353 AK091304 AK303932 AX746905 AK292035 CU676444 AL590525	7967	+	NM_001152 TSC_hg19_v1_chrX_+_118602390 AK315292	76937	+	NM_006667|PGRMC1|10857|progesterone receptor membrane component 1##AK313956|PGRMC1|10857|progesterone receptor membrane component 1##Y12711|PGRMC1|10857|progesterone receptor membrane component 1##BC034238|PGRMC1|10857|progesterone receptor membrane component 1##AK293618|PGRMC1|10857|progesterone receptor membrane component 1##DQ891774|PGRMC1|10857|progesterone receptor membrane component 1##DQ894958|PGRMC1|10857|progesterone receptor membrane component 1##CR456993|PGRMC1|10857|progesterone receptor membrane component 1##NM_020721|KIAA1210|57481|KIAA1210##AK026265|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_145305|SLC25A43|203427|solute carrier family 25, member 43##AK094254|SLC25A43|203427|solute carrier family 25, member 43##BC071871|SLC25A43|203427|solute carrier family 25, member 43##AK091304|SLC25A43|203427|solute carrier family 25, member 43##AK303932|SLC25A43|203427|solute carrier family 25, member 43##AK292035|SLC25A43|203427|solute carrier family 25, member 43##AL590525|SLC25A43|203427|solute carrier family 25, member 43##NM_001152|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5##AK315292|SLC25A5|292|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5	0.0	
chr1	55257722	55257821	reg1028292.p1	4.759	+	BC007956 AK289679 TSC_hg19_v1_chr1_-_55230197 BC011758 NM_152268	-27579	-	AK025524 NM_004623 TSC_hg19_v1_chr1_+_55181537 AF063602 AK292426 AK090964 AX746706 AK222562 AF073887 BC001276 BT006817 CU674642	-76234	+	NM_001039464 BC028620 CR749830 AK302446 AK302703 BX648088 AK093272 AX748025 BC144516 AK301894	-150318	+	AK000626 NM_001114108 NM_017904	9134	-	AK097520 NM_001110533 NM_152607 BC039109 BC064142	13983	+	TSC_hg19_v1_chr1_-_55331351 AK298414	73580	-	BC007956|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##AK289679|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##BC011758|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##NM_152268|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##AK025524|TTC4|7268|tetratricopeptide repeat domain 4##NM_004623|TTC4|7268|tetratricopeptide repeat domain 4##AF063602|TTC4|7268|tetratricopeptide repeat domain 4##AK292426|TTC4|7268|tetratricopeptide repeat domain 4##AK090964|TTC4|7268|tetratricopeptide repeat domain 4##AK222562|TTC4|7268|tetratricopeptide repeat domain 4##AF073887|TTC4|7268|tetratricopeptide repeat domain 4##BC001276|TTC4|7268|tetratricopeptide repeat domain 4##BT006817|TTC4|7268|tetratricopeptide repeat domain 4##NM_001039464|HEATR8|374977|HEAT repeat containing 8##BC028620|HEATR8-TTC4|100527960|HEATR8-TTC4 readthrough##CR749830|HEATR8-TTC4|100527960|HEATR8-TTC4 readthrough##AK302446|HEATR8|374977|HEAT repeat containing 8##AK302703|HEATR8|374977|HEAT repeat containing 8##BX648088|HEATR8-TTC4|100527960|HEATR8-TTC4 readthrough##AK093272|HEATR8|374977|HEAT repeat containing 8##BC144516|HEATR8|374977|HEAT repeat containing 8##AK301894|HEATR8|374977|HEAT repeat containing 8##AK000626|TTC22|55001|tetratricopeptide repeat domain 22##NM_001114108|TTC22|55001|tetratricopeptide repeat domain 22##NM_017904|TTC22|55001|tetratricopeptide repeat domain 22##AK097520|C1orf177|163747|chromosome 1 open reading frame 177##NM_001110533|C1orf177|163747|chromosome 1 open reading frame 177##NM_152607|C1orf177|163747|chromosome 1 open reading frame 177##BC039109|C1orf177|163747|chromosome 1 open reading frame 177##BC064142|C1orf177|163747|chromosome 1 open reading frame 177##AK298414|DHCR24|1718|24-dehydrocholesterol reductase	0.996352	CTCF.p2:-4:0.261	CTCF.p2:-5:0.736
chr15	67145837	67145943	reg1028892.p1	4.759	+	NM_001142861 U59914	-144961	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	-150331	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	-151216	+	TSC_hg19_v1_chr15_+_67358179 AK290881	212285	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	212511	+	NM_001145102 AK316017	272233	+	NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##AK290881|SMAD3|4088|SMAD family member 3##NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3	0.076859	
chr22	34316942	34317021	reg1037080.p1	4.759	+	AJ007583 AB011181 NM_004737 NM_133642	-611	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-862626	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-914255	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1145168	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1336495	+	AK293694 NM_001135729	1378286	+	AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)	0.0	
chr3	72924798	72924900	reg1032458.p1	4.759	+	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	-27257	-	BC017274 TSC_hg19_v1_chr3_-_72897575	-27274	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	-27301	-	TSC_hg19_v1_chr3_+_72937356 NM_001080393	12427	+	TSC_hg19_v1_chr3_+_73045961 AK289901 BC100281	121108	+	TSC_hg19_v1_chr3_+_73045984 BC110889	121142	+	BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_001080393|GXYLT2|727936|glucoside xylosyltransferase 2##AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	0.040989	
chr4	71729260	71729441	reg1030890.p2	4.759	+	TSC_hg19_v1_chr4_-_71705615 NM_002092 AK296287	-23713	-	TSC_hg19_v1_chr4_-_71705608 U07231 AK127161 AK090755 AK055499 AK056891 AK095799 AK097055 AK124124 BC040485	-23773	-	AK094806 NM_001098477	-24147	-	NM_001244766 NM_001244767 NM_173468 AK093545 AX748194 TSC_hg19_v1_chr4_+_71768085 AK299481 BC038112 AK313513	38763	+	TSC_hg19_v1_chr4_+_71859320 NM_000788 AK303292 AK313523 BC103764	129957	+	M60527 TSC_hg19_v1_chr4_+_71859434 BC114617 JF806429 BT019941 BT019942 CR536527 CR541876	130121	+	NM_002092|GRSF1|2926|G-rich RNA sequence binding factor 1##AK296287|GRSF1|2926|G-rich RNA sequence binding factor 1##U07231|GRSF1|2926|G-rich RNA sequence binding factor 1##AK127161|GRSF1|2926|G-rich RNA sequence binding factor 1##AK090755|GRSF1|2926|G-rich RNA sequence binding factor 1##AK055499|GRSF1|2926|G-rich RNA sequence binding factor 1##AK056891|GRSF1|2926|G-rich RNA sequence binding factor 1##AK095799|GRSF1|2926|G-rich RNA sequence binding factor 1##AK097055|GRSF1|2926|G-rich RNA sequence binding factor 1##AK124124|GRSF1|2926|G-rich RNA sequence binding factor 1##BC040485|GRSF1|2926|G-rich RNA sequence binding factor 1##AK094806|GRSF1|2926|G-rich RNA sequence binding factor 1##NM_001098477|GRSF1|2926|G-rich RNA sequence binding factor 1##NM_001244766|MOB1B|92597|MOB kinase activator 1B##NM_001244767|MOB1B|92597|MOB kinase activator 1B##NM_173468|MOB1B|92597|MOB kinase activator 1B##AK093545|MOB1B|92597|MOB kinase activator 1B##AK299481|MOB1B|92597|MOB kinase activator 1B##BC038112|MOB1B|92597|MOB kinase activator 1B##AK313513|MOB1B|92597|MOB kinase activator 1B##NM_000788|DCK|1633|deoxycytidine kinase##AK303292|DCK|1633|deoxycytidine kinase##AK313523|DCK|1633|deoxycytidine kinase##BC103764|DCK|1633|deoxycytidine kinase##M60527|DCK|1633|deoxycytidine kinase##BC114617|DCK|1633|deoxycytidine kinase##JF806429|DCK|1633|deoxycytidine kinase##BT019941|DCK|1633|deoxycytidine kinase##BT019942|DCK|1633|deoxycytidine kinase##CR536527|DCK|1633|deoxycytidine kinase##CR541876|DCK|1633|deoxycytidine kinase	0.0	
chr11	19367732	19367912	reg1020057.p1	4.758	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-104621	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-105347	-	U20324 U72899 U49837 BC057221 NM_001127656 TSC_hg19_v1_chr11_-_19223531 AK313289 NM_003476 AF121260	-144264	-	AB063115 NM_001111018 AJ488205	4493	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	367044	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	676566	+	AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##U20324|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U72899|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U49837|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##BC057221|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_001127656|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AK313289|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_003476|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AF121260|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2	0.0	
chr17	10657567	10657665	reg1029745.p1	4.758	+	AY550194 NM_001004313	-23971	-	NM_020233 BC070155 AB073393 AK292629 BC001294	-56668	+	TSC_hg19_v1_chr17_-_10600869 DQ891605 DQ894798 AF026852 AF183424 BC015504 AK098826 AK315595 AK074588 NM_004589	-56763	-	AK021549 TSC_hg19_v1_chr17_-_10741398 AK299808 NM_001101387	83791	-	NM_001173461 NM_001173462 NM_207386	487123	+	AK094349 TSC_hg19_v1_chr17_+_11465221 BC105704 BC105705 BC105707 BC105706	807580	+	AY550194|TMEM220|388335|transmembrane protein 220##NM_001004313|TMEM220|388335|transmembrane protein 220##NM_020233|C17orf48|56985|chromosome 17 open reading frame 48##BC070155|C17orf48|56985|chromosome 17 open reading frame 48##AB073393|C17orf48|56985|chromosome 17 open reading frame 48##AK292629|C17orf48|56985|chromosome 17 open reading frame 48##BC001294|C17orf48|56985|chromosome 17 open reading frame 48##DQ891605|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##DQ894798|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF026852|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF183424|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##BC015504|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK098826|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK315595|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK074588|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_004589|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK021549|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##AK299808|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##NM_001101387|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##NM_001173461|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_001173462|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_207386|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##AK094349|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105704|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105705|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105707|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105706|SHISA6|388336|shisa homolog 6 (Xenopus laevis)	0.959296	CTCF.p2:-3:0.959
chr17	16492637	16492776	reg1003344.p1	4.758	+	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-20210	-	NM_001113567 NM_207387 TSC_hg19_v1_chr17_-_16395510	-97199	-	TSC_hg19_v1_chr17_-_16395091 AK093015 AX747857 BC144381	-97553	-	AK131401 NM_020787	64455	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	100898	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	382698	-	AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##NM_001113567|FAM211A|388341|family with sequence similarity 211, member A##NM_207387|FAM211A|388341|family with sequence similarity 211, member A##AK093015|FAM211A|388341|family with sequence similarity 211, member A##BC144381|FAM211A|388341|family with sequence similarity 211, member A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B	0.0	
chr18	11872626	11872716	reg1027653.p2	4.758	+	NM_020412 TSC_hg19_v1_chr18_+_11851412 AK314068 BC065933 BC012733 AF281064 CU680382	-21222	+	L10665 TSC_hg19_v1_chr18_+_11752245	-120456	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	-121156	+	BC002877 TSC_hg19_v1_chr18_-_11908317 AK054639 AX775859 DQ786245 BC073994 AK309948 AF289560	35635	-	AX775853 AX775855 AL833636 TSC_hg19_v1_chr18_-_11908364	35685	-	AF363484 NM_001242904 NM_023075	36115	-	NM_020412|CHMP1B|57132|charged multivesicular body protein 1B##AK314068|CHMP1B|57132|charged multivesicular body protein 1B##BC065933|CHMP1B|57132|charged multivesicular body protein 1B##BC012733|CHMP1B|57132|charged multivesicular body protein 1B##AF281064|CHMP1B|57132|charged multivesicular body protein 1B##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC002877|MPPE1|65258|metallophosphoesterase 1##AK054639|MPPE1|65258|metallophosphoesterase 1##DQ786245|MPPE1|65258|metallophosphoesterase 1##BC073994|MPPE1|65258|metallophosphoesterase 1##AK309948|MPPE1|65258|metallophosphoesterase 1##AF289560|MPPE1|65258|metallophosphoesterase 1##AL833636|MPPE1|65258|metallophosphoesterase 1##AF363484|MPPE1|65258|metallophosphoesterase 1##NM_001242904|MPPE1|65258|metallophosphoesterase 1##NM_023075|MPPE1|65258|metallophosphoesterase 1	0.0	
chr19	40283931	40284111	reg1001879.p2	4.758	+	NM_001143832	-16788	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	-55382	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	-88978	+	TSC_hg19_v1_chr19_-_40324779 AF205861 BC025291 AK074971 BC009688 AK302127 BC018751 NM_004714 NM_006483 NM_006484 Y17999	40777	-	BC019609 BC015218 TSC_hg19_v1_chr19_-_40331308 AB451384 BT006830 BT020144 CR457069	47270	-	AB463635 M59849 TSC_hg19_v1_chr19_-_40336992	52947	-	NM_001143832|LEUTX|342900|leucine twenty homeobox##FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC019609|FBL|2091|fibrillarin##BC015218|FBL|2091|fibrillarin##AB451384|FBL|2091|fibrillarin##BT006830|FBL|2091|fibrillarin##BT020144|FBL|2091|fibrillarin##CR457069|FBL|2091|fibrillarin##M59849|FBL|2091|fibrillarin	0.0	
chr20	7094636	7094750	reg1030180.p2	4.758	+	BC069214 NM_001200	-345949	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-990530	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-990816	-	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	826409	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	905607	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	905714	-	BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4	0.985055	CTCF.p2:-10:0.985
chr4	144257966	144258116	reg1026363.p1	4.758	+	NM_002039 NM_207123 AK289767 BC064848	-26	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	-151916	+	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	-151977	+	TSC_hg19_v1_chr4_+_144434860 NM_003601 AK316444 AK302841 BC023144 AB010882 AK308424	176687	+	AB384709 TSC_hg19_v1_chr4_+_144435139	177073	+	TSC_hg19_v1_chr4_+_144480613 AX721285 AX721289 BC025996	222575	+	NM_002039|GAB1|2549|GRB2-associated binding protein 1##NM_207123|GAB1|2549|GRB2-associated binding protein 1##AK289767|GAB1|2549|GRB2-associated binding protein 1##BC064848|GAB1|2549|GRB2-associated binding protein 1##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##BC025996|GUSBP5|441046|glucuronidase, beta pseudogene 5	0.087919	
chr6	13230148	13230263	reg1008744.p3	4.758	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-513162	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-513262	+	TSC_hg19_v1_chr6_+_12514301 D28417	-715903	+	AK091836 AX747210 NM_001242698	65612	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	98495	-	AK027010 NM_001242630	178163	-	AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr15	30383340	30383468	reg1029198.p1	4.757	+	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-268781	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-269062	-	NM_015307	-520478	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	302308	-	TSC_hg19_v1_chr15_+_30918372 BC071990	534982	+	BC105788 NM_001039841	535474	+	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B	0.864445	CTCF.p2:4:0.836
chr17	4324167	4324347	reg1004637.p2	4.757	+	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	-54349	-	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	-54546	-	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	-157106	-	AK172832 NM_182538 TSC_hg19_v1_chr17_+_4337247 BC023646	12985	+	NM_001124758 BC041772 TSC_hg19_v1_chr17_+_4402177 AB441165	77979	+	EU832503 BC050546 TSC_hg19_v1_chr17_-_4458680 AF147709 AK303150 AK301622 AK307948 NM_001105538 NM_014520	134417	-	AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK172832|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_182538|SPNS3|201305|spinster homolog 3 (Drosophila)##BC023646|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_001124758|SPNS2|124976|spinster homolog 2 (Drosophila)##BC041772|SPNS2|124976|spinster homolog 2 (Drosophila)##AB441165|SPNS2|124976|spinster homolog 2 (Drosophila)##EU832503|MYBBP1A|10514|MYB binding protein (P160) 1a##BC050546|MYBBP1A|10514|MYB binding protein (P160) 1a##AF147709|MYBBP1A|10514|MYB binding protein (P160) 1a##AK303150|MYBBP1A|10514|MYB binding protein (P160) 1a##AK301622|MYBBP1A|10514|MYB binding protein (P160) 1a##AK307948|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_001105538|MYBBP1A|10514|MYB binding protein (P160) 1a##NM_014520|MYBBP1A|10514|MYB binding protein (P160) 1a	0.0	
chr19	4374011	4374121	reg1029275.p1	4.757	+	NM_001159846 NM_032868 AK027887 AK308468 TSC_hg19_v1_chr19_+_4343562 BC032652	-30507	+	TSC_hg19_v1_chr19_-_4342718 AK125774	-31316	-	AB527779 TSC_hg19_v1_chr19_-_4338790 BC000795 AJ245719 AK000241 NM_001013841 NM_017720	-35268	-	TSC_hg19_v1_chr19_-_4400419 AY364240 CR542087 AB527297 DQ891258 DQ894444 U65999 X99656 AK097616 NM_001199944	26327	-	BC001270 TSC_hg19_v1_chr19_-_4400513 AK315450 BC098565 AK299166 NM_001199943 NM_003025	26487	-	BC067093 NM_005483 BC052620 TSC_hg19_v1_chr19_+_4402664 BC041606 AB527824 U20979 BC005813 BC011560	28650	+	NM_001159846|MPND|84954|MPN domain containing##NM_032868|MPND|84954|MPN domain containing##AK027887|MPND|84954|MPN domain containing##AK308468|MPND|84954|MPN domain containing##BC032652|MPND|84954|MPN domain containing##AK125774|STAP2|55620|signal transducing adaptor family member 2##BC000795|STAP2|55620|signal transducing adaptor family member 2##AJ245719|STAP2|55620|signal transducing adaptor family member 2##AK000241|STAP2|55620|signal transducing adaptor family member 2##NM_001013841|STAP2|55620|signal transducing adaptor family member 2##NM_017720|STAP2|55620|signal transducing adaptor family member 2##AY364240|SH3GL1|6455|SH3-domain GRB2-like 1##CR542087|SH3GL1|6455|SH3-domain GRB2-like 1##DQ891258|SH3GL1|6455|SH3-domain GRB2-like 1##DQ894444|SH3GL1|6455|SH3-domain GRB2-like 1##U65999|SH3GL1|6455|SH3-domain GRB2-like 1##X99656|SH3GL1|6455|SH3-domain GRB2-like 1##AK097616|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199944|SH3GL1|6455|SH3-domain GRB2-like 1##BC001270|SH3GL1|6455|SH3-domain GRB2-like 1##AK315450|SH3GL1|6455|SH3-domain GRB2-like 1##BC098565|SH3GL1|6455|SH3-domain GRB2-like 1##AK299166|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199943|SH3GL1|6455|SH3-domain GRB2-like 1##NM_003025|SH3GL1|6455|SH3-domain GRB2-like 1##BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	0.0	
chr2	175855093	175855188	reg1028648.p1	4.757	+	AK055060 NM_001206602	-142830	-	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	-225971	-	TSC_hg19_v1_chr2_+_175584527 DQ895855	-270562	+	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	14873	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	177755	-	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	191164	-	AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1##AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##DQ895855|H3F3A|3020|H3 histone, family 3A##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)	0.0	
chr2	96823483	96823664	reg1020551.p3	4.757	+	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	-12414	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	-12619	-	BC107126 AJ537600 BC107127 NM_001002036	-19400	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	50482	-	TSC_hg19_v1_chr2_+_96874144 AK311432	50581	+	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	50961	-	BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.0	
chr3	170132150	170132268	reg1004943.p2	4.757	+	NM_001145097 NM_001248008 U70730 X15217 X15219	-54799	+	AK300053 TSC_hg19_v1_chr3_+_170075522 BC053554	-56653	+	TSC_hg19_v1_chr3_+_170075508 BC059386	-56703	+	NM_005602 TSC_hg19_v1_chr3_+_170136652 AK294108 AK312923 BC013577	4449	+	AK098766 NM_001185056 AK294087	6832	+	TSC_hg19_v1_chr3_-_170303774 AK122655 NM_020949	171609	-	NM_001145097|SKIL|6498|SKI-like oncogene##NM_001248008|SKIL|6498|SKI-like oncogene##U70730|SKIL|6498|SKI-like oncogene##X15217|SKIL|6498|SKI-like oncogene##X15219|SKIL|6498|SKI-like oncogene##AK300053|SKIL|6498|SKI-like oncogene##BC059386|SKIL|6498|SKI-like oncogene##NM_005602|CLDN11|5010|claudin 11##AK312923|CLDN11|5010|claudin 11##BC013577|CLDN11|5010|claudin 11##NM_001185056|CLDN11|5010|claudin 11##AK294087|CLDN11|5010|claudin 11##AK122655|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_020949|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14	0.0	
chr4	8887670	8887781	reg1030872.p2	4.757	+	AB593128 M99587 NM_018942	-14228	-	U83411 TSC_hg19_v1_chr4_+_8594521	-293202	+	AK056317 NM_001014447 NM_001014448 NM_003652 BC080539 BC006393 BC018913 TSC_hg19_v1_chr4_+_8594489	-293286	+	NM_001040071	63751	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	329404	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	357878	+	M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##AK056317|CPZ|8532|carboxypeptidase Z##NM_001014447|CPZ|8532|carboxypeptidase Z##NM_001014448|CPZ|8532|carboxypeptidase Z##NM_003652|CPZ|8532|carboxypeptidase Z##BC080539|CPZ|8532|carboxypeptidase Z##BC006393|CPZ|8532|carboxypeptidase Z##BC018913|CPZ|8532|carboxypeptidase Z##NM_001040071|LOC650293|650293|seven transmembrane helix receptor##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.672965	CTCF.p2:15:0.673
chr7	143002677	143002822	reg1026607.p1	4.757	+	NM_001224 U13022	-16069	+	TSC_hg19_v1_chr7_+_142985534 AK291274 BC002427 AK303391 AB590463 CU677954 U13021 AF314174 BT007240 DQ893820	-17219	+	NM_032982 NM_032983 TSC_hg19_v1_chr7_+_142985431	-17379	+	NM_000083 Z25884 BC112156 BC113495 BC143796 AB462980	10512	+	TSC_hg19_v1_chr7_+_143058809 AK316227	56052	+	AK291470 BC050543 NM_014690	56409	-	NM_001224|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##U13022|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##AK291274|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##BC002427|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##AK303391|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##U13021|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##AF314174|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##BT007240|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##DQ893820|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##NM_032982|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##NM_032983|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##NM_000083|CLCN1|1180|chloride channel 1, skeletal muscle##Z25884|CLCN1|1180|chloride channel 1, skeletal muscle##BC112156|CLCN1|1180|chloride channel 1, skeletal muscle##BC113495|CLCN1|1180|chloride channel 1, skeletal muscle##BC143796|CLCN1|1180|chloride channel 1, skeletal muscle##AK316227|ZYX|7791|zyxin##AK291470|FAM131B|9715|family with sequence similarity 131, member B##BC050543|FAM131B|9715|family with sequence similarity 131, member B##NM_014690|FAM131B|9715|family with sequence similarity 131, member B	0.901907	CTCF.p2:0:0.902
chr7	886893	887043	reg1030213.p1	4.757	+	BC142707 NM_001130965 AB463335 CU680640	-14820	+	NM_001171944 NM_001171945 NM_025154 TSC_hg19_v1_chr7_+_856279 AK022816 AK302896 AK309120 AK022469 BX538211 BC151827 AB018353 BC152418	-30686	+	BC013613 NM_001171946	-31775	+	TSC_hg19_v1_chr7_+_916188 NM_015949	29235	+	TSC_hg19_v1_chr7_+_916249 BC003550 AK023560 AF132954	29302	+	AK300644 AK300859 TSC_hg19_v1_chr7_-_960513	73546	-	BC142707|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001130965|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171944|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171945|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_025154|SUN1|23353|Sad1 and UNC84 domain containing 1##AK022816|SUN1|23353|Sad1 and UNC84 domain containing 1##AK302896|SUN1|23353|Sad1 and UNC84 domain containing 1##AK309120|SUN1|23353|Sad1 and UNC84 domain containing 1##AK022469|SUN1|23353|Sad1 and UNC84 domain containing 1##BX538211|SUN1|23353|Sad1 and UNC84 domain containing 1##BC151827|SUN1|23353|Sad1 and UNC84 domain containing 1##AB018353|SUN1|23353|Sad1 and UNC84 domain containing 1##BC152418|SUN1|23353|Sad1 and UNC84 domain containing 1##BC013613|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171946|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_015949|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##BC003550|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK023560|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AF132954|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK300644|ADAP1|11033|ArfGAP with dual PH domains 1##AK300859|ADAP1|11033|ArfGAP with dual PH domains 1	0.0	
chr19	55600050	55600130	reg1025702.p1	4.756	+	AK000265 AK301615 NM_017729 BC015763 CU677435	-8281	+	AK309305 NM_133180 AF370395 AK075098 AK296732	-12845	+	BC009881 NM_138412	-19186	-	AB209452 TSC_hg19_v1_chr19_-_55629006 AF312028 NM_017607	28842	-	TSC_hg19_v1_chr19_-_55658311 AY762903 AY762904 BT019630 S51938	58327	-	S69208 S69209 BC022086 BC010963 AK291352 AK308199 BC007074 BC034143 BC107798 M19308 M19309 TSC_hg19_v1_chr19_-_55660575 NM_001126132 NM_001126133 NM_003283	60491	-	AK000265|EPS8L1|54869|EPS8-like 1##AK301615|EPS8L1|54869|EPS8-like 1##NM_017729|EPS8L1|54869|EPS8-like 1##BC015763|EPS8L1|54869|EPS8-like 1##AK309305|EPS8L1|54869|EPS8-like 1##NM_133180|EPS8L1|54869|EPS8-like 1##AF370395|EPS8L1|54869|EPS8-like 1##AK075098|EPS8L1|54869|EPS8-like 1##AK296732|EPS8L1|54869|EPS8-like 1##BC009881|RDH13|112724|retinol dehydrogenase 13 (all-trans/9-cis)##NM_138412|RDH13|112724|retinol dehydrogenase 13 (all-trans/9-cis)##AB209452|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##AF312028|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##NM_017607|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##AY762903|TNNT1|7138|troponin T type 1 (skeletal, slow)##AY762904|TNNT1|7138|troponin T type 1 (skeletal, slow)##BT019630|TNNT1|7138|troponin T type 1 (skeletal, slow)##S51938|TNNT1|7138|troponin T type 1 (skeletal, slow)##S69208|TNNT1|7138|troponin T type 1 (skeletal, slow)##S69209|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC022086|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC010963|TNNT1|7138|troponin T type 1 (skeletal, slow)##AK291352|TNNT1|7138|troponin T type 1 (skeletal, slow)##AK308199|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC007074|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC034143|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC107798|TNNT1|7138|troponin T type 1 (skeletal, slow)##M19308|TNNT1|7138|troponin T type 1 (skeletal, slow)##M19309|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_001126132|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_001126133|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_003283|TNNT1|7138|troponin T type 1 (skeletal, slow)	0.999506	CTCF.p2:45:1.000
chr20	18774728	18774847	reg1030111.p1	4.756	+	TSC_hg19_v1_chr20_+_18568661 NM_080820 BC045167 AK074304 BC100923 BC100924 BC100925 BC100926 AK291440 AF332356 CU692252	-206137	+	BC092494 AK024594 BC015983 TSC_hg19_v1_chr20_+_18548094 BC039422 BC127753 BC127754 BC141963 BC141964 BC150559 BC150560 AF147354	-226687	+	TSC_hg19_v1_chr20_+_18488583 AK299171 BC001575 AK299513 NM_001172745 BC005404	-286161	+	AF418568 AF418570 AX721297 NM_178483 AK130970 AY248902 BC105121 BC112024	19611	+	NM_001242671	36051	-	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	418498	+	NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC092494|LINC00493|388789|long intergenic non-protein coding RNA 493##AK024594|LINC00493|388789|long intergenic non-protein coding RNA 493##BC015983|LINC00493|388789|long intergenic non-protein coding RNA 493##BC039422|LINC00493|388789|long intergenic non-protein coding RNA 493##BC127753|LINC00493|388789|long intergenic non-protein coding RNA 493##BC127754|LINC00493|388789|long intergenic non-protein coding RNA 493##BC141963|LINC00493|388789|long intergenic non-protein coding RNA 493##BC141964|LINC00493|388789|long intergenic non-protein coding RNA 493##BC150559|LINC00493|388789|long intergenic non-protein coding RNA 493##BC150560|LINC00493|388789|long intergenic non-protein coding RNA 493##AF147354|LINC00493|388789|long intergenic non-protein coding RNA 493##AK299171|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC001575|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AK299513|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_001172745|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC005404|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AF418568|C20orf79|140856|chromosome 20 open reading frame 79##AF418570|C20orf79|140856|chromosome 20 open reading frame 79##NM_178483|C20orf79|140856|chromosome 20 open reading frame 79##AK130970|C20orf79|140856|chromosome 20 open reading frame 79##AY248902|C20orf79|140856|chromosome 20 open reading frame 79##BC105121|C20orf79|140856|chromosome 20 open reading frame 79##BC112024|C20orf79|140856|chromosome 20 open reading frame 79##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3	0.429076	CTCF.p2:13:0.429
chr4	90946553	90946686	reg1030947.p1	4.756	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-130557	+	NM_001146055	-187173	-	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	-188377	-	AK097436 NM_001145065 AK310825 AB051467 BC021681	102099	+	BC051694 NM_207491	209562	+	AB209318 NM_001510 AK308611	2278973	+	AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##NM_001146055|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2	0.994083	CTCF.p2:-28:0.994
chr5	67584043	67584130	reg1022166.p2	4.756	+	TSC_hg19_v1_chr5_+_67511602 BC094795	-72479	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	-72506	+	BC109069 BC109070 D83597 NM_005582 AK313177	-1091486	-	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	208	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	2460	+	AK094785 NM_001242466 AK294919	4366	+	BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.0	
chr6	47599327	47599507	reg1007899.p2	4.756	+	TSC_hg19_v1_chr6_+_47445937 AF146277 BC069444	-153501	+	TSC_hg19_v1_chr6_+_47445524 NM_012120	-153902	+	TSC_hg19_v1_chr6_-_47277647 NM_014452	-321722	-	AY140953 DQ315369 NM_153839	24856	+	AK095395 NM_153838 DQ315370	66877	+	BC126194 BC126198 NM_181744 AY377391 AY288419 HQ258199	150371	+	AF146277|CD2AP|23607|CD2-associated protein##BC069444|CD2AP|23607|CD2-associated protein##NM_012120|CD2AP|23607|CD2-associated protein##NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AY140953|GPR111|222611|G protein-coupled receptor 111##DQ315369|GPR111|222611|G protein-coupled receptor 111##NM_153839|GPR111|222611|G protein-coupled receptor 111##AK095395|GPR115|221393|G protein-coupled receptor 115##NM_153838|GPR115|221393|G protein-coupled receptor 115##DQ315370|GPR115|221393|G protein-coupled receptor 115##BC126194|OPN5|221391|opsin 5##BC126198|OPN5|221391|opsin 5##NM_181744|OPN5|221391|opsin 5##AY377391|OPN5|221391|opsin 5##AY288419|OPN5|221391|opsin 5##HQ258199|OPN5|221391|opsin 5	0.0	
chr7	90181964	90182112	reg1031796.p1	4.756	+	TSC_hg19_v1_chr7_+_90032774 AL136770 BC016061	-149234	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	-149334	+	TSC_hg19_v1_chr7_+_89976015 AF351613 NM_001042717 NM_033107 AK095561 BC107714 CR933597 AK294325 BC144162	-206034	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	43771	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	156745	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	157122	+	AL136770|CLDN12|9069|claudin 12##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12##AF351613|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001042717|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_033107|GTPBP10|85865|GTP-binding protein 10 (putative)##AK095561|GTPBP10|85865|GTP-binding protein 10 (putative)##BC107714|GTPBP10|85865|GTP-binding protein 10 (putative)##CR933597|GTPBP10|85865|GTP-binding protein 10 (putative)##AK294325|GTPBP10|85865|GTP-binding protein 10 (putative)##BC144162|GTPBP10|85865|GTP-binding protein 10 (putative)##AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14	0.980269	CTCF.p2:1:0.980
chr15	91240558	91240720	reg1029348.p2	4.755	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-167443	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-309100	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-309133	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	19975	+	NM_002569 X17094	171245	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	187062	+	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene	0.0	
chr1	54873132	54873313	reg1017598.p1	4.754	+	TSC_hg19_v1_chr1_-_54872087 NM_001009955	-1138	-	NM_018070 NM_145716 TSC_hg19_v1_chr1_-_54872066	-1200	-	CU688156 AK289474 BC003605 BC127866 BC066365 TSC_hg19_v1_chr1_-_54871828 AF500116	-1434	-	TSC_hg19_v1_chr1_+_55007956 AK091112	134739	+	NM_015547 NM_147161 TSC_hg19_v1_chr1_+_55013900 BC001517 AK023937 AK223570 AB014607 BC093844 BC093846 AF416921 AF416922	140672	+	CU676764 AY358629 BC015993 BC020874 NM_176782 AK091901 AX747244	215926	-	NM_001009955|SSBP3|23648|single stranded DNA binding protein 3##NM_018070|SSBP3|23648|single stranded DNA binding protein 3##NM_145716|SSBP3|23648|single stranded DNA binding protein 3##AK289474|SSBP3|23648|single stranded DNA binding protein 3##BC003605|SSBP3|23648|single stranded DNA binding protein 3##BC066365|SSBP3|23648|single stranded DNA binding protein 3##AF500116|SSBP3|23648|single stranded DNA binding protein 3##AK091112|ACOT11|26027|acyl-CoA thioesterase 11##NM_015547|ACOT11|26027|acyl-CoA thioesterase 11##NM_147161|ACOT11|26027|acyl-CoA thioesterase 11##BC001517|ACOT11|26027|acyl-CoA thioesterase 11##AK023937|ACOT11|26027|acyl-CoA thioesterase 11##AK223570|ACOT11|26027|acyl-CoA thioesterase 11##AB014607|ACOT11|26027|acyl-CoA thioesterase 11##BC093844|ACOT11|26027|acyl-CoA thioesterase 11##BC093846|ACOT11|26027|acyl-CoA thioesterase 11##AF416921|ACOT11|26027|acyl-CoA thioesterase 11##AF416922|ACOT11|26027|acyl-CoA thioesterase 11##AY358629|FAM151A|338094|family with sequence similarity 151, member A##BC015993|FAM151A|338094|family with sequence similarity 151, member A##BC020874|FAM151A|338094|family with sequence similarity 151, member A##NM_176782|FAM151A|338094|family with sequence similarity 151, member A##AK091901|FAM151A|338094|family with sequence similarity 151, member A	0.0	
chr17	45794880	45795038	reg1029724.p2	4.754	+	TSC_hg19_v1_chr17_+_45773425 AB383985	-21510	+	TSC_hg19_v1_chr17_+_45773067 BC111418	-21920	+	AB018318 BC152407 BC167150 NM_014726	-22330	+	AF093098 NM_013351 AK223634 BC039739 AF241243 AB590854 TSC_hg19_v1_chr17_+_45810959	15825	+	BC065482 TSC_hg19_v1_chr17_-_45899130	104165	-	TSC_hg19_v1_chr17_-_45899154 AF323729 AK000267 BC028010 NM_145798 AK289523 AF392446	104226	-	BC111418|TBKBP1|9755|TBK1 binding protein 1##AB018318|TBKBP1|9755|TBK1 binding protein 1##BC152407|TBKBP1|9755|TBK1 binding protein 1##BC167150|TBKBP1|9755|TBK1 binding protein 1##NM_014726|TBKBP1|9755|TBK1 binding protein 1##AF093098|TBX21|30009|T-box 21##NM_013351|TBX21|30009|T-box 21##AK223634|TBX21|30009|T-box 21##BC039739|TBX21|30009|T-box 21##AF241243|TBX21|30009|T-box 21##BC065482|OSBPL7|114881|oxysterol binding protein-like 7##AF323729|OSBPL7|114881|oxysterol binding protein-like 7##BC028010|OSBPL7|114881|oxysterol binding protein-like 7##NM_145798|OSBPL7|114881|oxysterol binding protein-like 7##AK289523|OSBPL7|114881|oxysterol binding protein-like 7##AF392446|OSBPL7|114881|oxysterol binding protein-like 7	0.915123	CTCF.p2:11:0.915
chr2	241623151	241623295	reg1033604.p1	4.754	+	BC157895 BC171912 BC139748 NM_001102467 BC041460	-908	-	AK314002 NM_005301	-58562	+	TSC_hg19_v1_chr2_+_241544846 NM_001195381 NM_001195382 AK172786 AK290256	-78383	+	AB040748 BC041460 NM_198998	8038	+	BC064906 TSC_hg19_v1_chr2_-_241759637 AK307119 AB621817 AB210029 AB290172 NM_001244008 NM_004321	136452	-	NM_000030 X53414 BC132819 D13368 S71388 AK315331 TSC_hg19_v1_chr2_+_241808251 AK292754 AK298420 AB292648 X56092 AF348451 AK298400 AK316495	185045	+	BC157895|AQP12B|653437|aquaporin 12B##BC171912|AQP12B|653437|aquaporin 12B##BC139748|AQP12B|653437|aquaporin 12B##NM_001102467|AQP12B|653437|aquaporin 12B##BC041460|AQP12B|653437|aquaporin 12B##AK314002|GPR35|2859|G protein-coupled receptor 35##NM_005301|GPR35|2859|G protein-coupled receptor 35##NM_001195381|GPR35|2859|G protein-coupled receptor 35##NM_001195382|GPR35|2859|G protein-coupled receptor 35##AK172786|GPR35|2859|G protein-coupled receptor 35##AK290256|GPR35|2859|G protein-coupled receptor 35##AB040748|AQP12A|375318|aquaporin 12A##BC041460|AQP12B|653437|aquaporin 12B##NM_198998|AQP12A|375318|aquaporin 12A##BC064906|KIF1A|547|kinesin family member 1A##AK307119|KIF1A|547|kinesin family member 1A##AB210029|KIF1A|547|kinesin family member 1A##AB290172|KIF1A|547|kinesin family member 1A##NM_001244008|KIF1A|547|kinesin family member 1A##NM_004321|KIF1A|547|kinesin family member 1A##NM_000030|AGXT|189|alanine-glyoxylate aminotransferase##X53414|AGXT|189|alanine-glyoxylate aminotransferase##BC132819|AGXT|189|alanine-glyoxylate aminotransferase##D13368|AGXT|189|alanine-glyoxylate aminotransferase##AK315331|AGXT|189|alanine-glyoxylate aminotransferase##AK292754|AGXT|189|alanine-glyoxylate aminotransferase##AK298420|AGXT|189|alanine-glyoxylate aminotransferase##AB292648|AGXT|189|alanine-glyoxylate aminotransferase##X56092|AGXT|189|alanine-glyoxylate aminotransferase##AF348451|AGXT|189|alanine-glyoxylate aminotransferase##AK298400|AGXT|189|alanine-glyoxylate aminotransferase##AK316495|AGXT|189|alanine-glyoxylate aminotransferase	0.0	
chr8	8860181	8860311	reg1030316.p1	4.754	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	-109308	-	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	-300548	+	AK122582 NM_001080826	-621024	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	119	+	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	259	+	TSC_hg19_v1_chr8_-_9008167 BC043388 AK024067 NM_024607	147932	-	NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1##BC043388|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK024067|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_024607|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B	0.112273	
chr9	68477137	68477249	reg1028259.p1	4.754	+	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	-550377	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-1923918	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-1982997	-	TSC_hg19_v1_chr9_+_68726468 AK311167	249309	+	TSC_hg19_v1_chr9_+_69065493 AK311167	588345	+	NM_001085476	725010	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6	0.0	
chr1	181059520	181059617	reg1023726.p2	4.753	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-1703	+	NM_016545	-1931	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-56418	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	393132	+	BC137223 BC137224 AK128654 NM_001009992	971229	-	TSC_hg19_v1_chr1_-_182354649 AK301600	1295114	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.0	
chr2	108449842	108449972	reg1028526.p1	4.753	+	NM_182588 TSC_hg19_v1_chr2_+_108443399	-6513	+	TSC_hg19_v1_chr2_-_107503517 AX795200 AB059555 BC008680 AK307784 NM_001142352 NM_032528 FJ433883	-946361	-	TSC_hg19_v1_chr2_-_107503063 FJ433884	-946845	-	AK315280 AB084377 AK300801 AB043997 NM_021815 BC111525 BC111524	153095	+	AB528243 NM_001008743	413743	+	AF186252 AF186255 NM_001056 NM_176825 AF186251 AF186254 AK297086 AK313193 AK298306 U66036 AF186253 AF186256 AB008164 AF026303 BC005353	455378	+	NM_182588|RGPD4|285190|RANBP2-like and GRIP domain containing 4##AB059555|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##BC008680|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##AK307784|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142352|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_032528|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##AK315280|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB084377|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AK300801|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB043997|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_021815|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111525|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111524|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3##AF186252|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186255|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001056|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_176825|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186251|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186254|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK297086|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK313193|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK298306|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##U66036|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186253|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186256|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AB008164|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF026303|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC005353|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2	0.578776	CTCF.p2:-1:0.579
chr5	74976854	74976942	reg1003110.p1	4.753	+	NM_001130105	-169093	-	AF163570 NM_016218 TSC_hg19_v1_chr5_+_74807715 AK091659 AK314610 AK026316 AF194973 AF315601 AF318313	-169162	+	TSC_hg19_v1_chr5_-_74807448 AK091851 AK292087 AX747221 NM_005713 NM_031361	-169429	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	31364	-	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	36362	-	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	402373	+	NM_001130105|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AF163570|POLK|51426|polymerase (DNA directed) kappa##NM_016218|POLK|51426|polymerase (DNA directed) kappa##AK091659|POLK|51426|polymerase (DNA directed) kappa##AK314610|POLK|51426|polymerase (DNA directed) kappa##AK026316|POLK|51426|polymerase (DNA directed) kappa##AF194973|POLK|51426|polymerase (DNA directed) kappa##AF318313|POLK|51426|polymerase (DNA directed) kappa##AK091851|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AK292087|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##NM_005713|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##NM_031361|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C	0.0	
chrX	83014990	83015113	reg1029084.p1	4.753	+	AK314967 NM_000307 TSC_hg19_v1_chrX_+_82763302 X82324 AB464667	-251752	+	TSC_hg19_v1_chrX_+_80457600 BC016709 AL136718 AK129610 AF042081 AK310011 AB590910 CR533478	-2557403	+	TSC_hg19_v1_chrX_+_80457572 AK309351	-2557475	+	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	101120	+	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	427921	-	BC101720 BC101722 BC143522 BX538112 AK055240 AK290050 BX649166 NM_001177478 NM_001177479 NM_144657	742391	-	AK314967|POU3F4|5456|POU class 3 homeobox 4##NM_000307|POU3F4|5456|POU class 3 homeobox 4##X82324|POU3F4|5456|POU class 3 homeobox 4##BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC101720|HDX|139324|highly divergent homeobox##BC101722|HDX|139324|highly divergent homeobox##BC143522|HDX|139324|highly divergent homeobox##BX538112|HDX|139324|highly divergent homeobox##AK055240|HDX|139324|highly divergent homeobox##AK290050|HDX|139324|highly divergent homeobox##BX649166|HDX|139324|highly divergent homeobox##NM_001177478|HDX|139324|highly divergent homeobox##NM_001177479|HDX|139324|highly divergent homeobox##NM_144657|HDX|139324|highly divergent homeobox	0.709129	CTCF.p2:33:0.709
chr12	111099357	111099537	reg1027905.p1	4.752	+	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	-47522	+	AK124744 TSC_hg19_v1_chr12_-_111021124	-78321	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	-78377	-	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	27511	-	AK293543 NM_001040107	28152	-	L07395 AK297882 AB590512 EU831993 EU832086 TSC_hg19_v1_chr12_-_111180593	81099	-	AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1##L07395|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK297882|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU831993|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU832086|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme	0.442418	CTCF.p2:20:0.442
chr1	217221791	217221914	reg1028132.p1	4.752	+	AY388459 AY388458 NM_001243512 NM_001243513 AY388457 AY388460 NM_001243510 NM_001243511	-108841	-	AY388461 NM_001243514	-243144	-	HQ692853 AF117255 BC008218 AY388456 AK291647 TSC_hg19_v1_chr1_-_216896791 AB020639 AK290945 BC064700 NM_001243515 NM_001243518 NM_001243519 NM_001438	-325126	-	AB362218 AK131193 NM_001243507 NM_001243509	28418	-	AF058291 AK298851 AK291028 BX649009 NM_001243506 NM_206594 NM_206595	41114	-	NM_001243505	41343	-	AY388459|ESRRG|2104|estrogen-related receptor gamma##AY388458|ESRRG|2104|estrogen-related receptor gamma##NM_001243512|ESRRG|2104|estrogen-related receptor gamma##NM_001243513|ESRRG|2104|estrogen-related receptor gamma##AY388457|ESRRG|2104|estrogen-related receptor gamma##AY388460|ESRRG|2104|estrogen-related receptor gamma##NM_001243510|ESRRG|2104|estrogen-related receptor gamma##NM_001243511|ESRRG|2104|estrogen-related receptor gamma##AY388461|ESRRG|2104|estrogen-related receptor gamma##NM_001243514|ESRRG|2104|estrogen-related receptor gamma##HQ692853|ESRRG|2104|estrogen-related receptor gamma##AF117255|ESRRG|2104|estrogen-related receptor gamma##BC008218|ESRRG|2104|estrogen-related receptor gamma##AY388456|ESRRG|2104|estrogen-related receptor gamma##AK291647|ESRRG|2104|estrogen-related receptor gamma##AB020639|ESRRG|2104|estrogen-related receptor gamma##AK290945|ESRRG|2104|estrogen-related receptor gamma##BC064700|ESRRG|2104|estrogen-related receptor gamma##NM_001243515|ESRRG|2104|estrogen-related receptor gamma##NM_001243518|ESRRG|2104|estrogen-related receptor gamma##NM_001243519|ESRRG|2104|estrogen-related receptor gamma##NM_001438|ESRRG|2104|estrogen-related receptor gamma##AB362218|ESRRG|2104|estrogen-related receptor gamma##AK131193|ESRRG|2104|estrogen-related receptor gamma##NM_001243507|ESRRG|2104|estrogen-related receptor gamma##NM_001243509|ESRRG|2104|estrogen-related receptor gamma##AF058291|ESRRG|2104|estrogen-related receptor gamma##AK298851|ESRRG|2104|estrogen-related receptor gamma##AK291028|ESRRG|2104|estrogen-related receptor gamma##BX649009|ESRRG|2104|estrogen-related receptor gamma##NM_001243506|ESRRG|2104|estrogen-related receptor gamma##NM_206594|ESRRG|2104|estrogen-related receptor gamma##NM_206595|ESRRG|2104|estrogen-related receptor gamma##NM_001243505|ESRRG|2104|estrogen-related receptor gamma	0.984586	CTCF.p2:3:0.985
chr13	100039550	100039730	reg1001680.p1	4.752	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-79942	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-129026	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-186521	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	114060	+	TSC_hg19_v1_chr13_+_100153777 BC130293	114142	+	BC041830 TSC_hg19_v1_chr13_+_100229390	189737	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.100082	
chr5	106888990	106889170	reg1031198.p2	4.752	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-3990599	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4294623	+	BC024591 NM_015216 AB463068	-4423806	+	AK308672 NM_001962 U26403	117510	-	TSC_hg19_v1_chr5_-_107717106 AK126722	828050	-	BC063316 NM_001163315	828718	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.0	
chr5	41722531	41722711	reg1031351.p1	4.752	+	AB464014 TSC_hg19_v1_chr5_-_41510701 AK127142 BX648329 NM_001005473	-211943	-	BC035723 NM_001115131	-461082	-	J05024 J04506 AK292509 TSC_hg19_v1_chr5_-_41213635 J05064 AK313673 NM_000065	-509032	-	AB528366 CR457049 CU679223 DQ891805 DQ894989 TSC_hg19_v1_chr5_-_41870488 AK312327	147853	-	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	147962	-	TSC_hg19_v1_chr5_-_41870706 NM_000436	148125	-	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BC035723|C6|729|complement component 6##NM_001115131|C6|729|complement component 6##J05024|C6|729|complement component 6##J04506|C6|729|complement component 6##AK292509|C6|729|complement component 6##J05064|C6|729|complement component 6##AK313673|C6|729|complement component 6##NM_000065|C6|729|complement component 6##CR457049|OXCT1|5019|3-oxoacid CoA transferase 1##DQ891805|OXCT1|5019|3-oxoacid CoA transferase 1##DQ894989|OXCT1|5019|3-oxoacid CoA transferase 1##AK312327|OXCT1|5019|3-oxoacid CoA transferase 1##BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1	0.0	
chr6	37457666	37457791	reg1023239.p1	4.752	+	AB385274 TSC_hg19_v1_chr6_+_37403469	-54291	+	TSC_hg19_v1_chr6_+_37401050 AK292564	-56673	+	TSC_hg19_v1_chr6_+_37400996 NM_015050 BC031890 D43949	-56782	+	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	9924	-	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	9968	-	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	207978	-	AK292564|FTSJD2|23070|FtsJ methyltransferase domain containing 2##NM_015050|FTSJD2|23070|FtsJ methyltransferase domain containing 2##BC031890|FTSJD2|23070|FtsJ methyltransferase domain containing 2##D43949|FTSJD2|23070|FtsJ methyltransferase domain containing 2##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1	0.981985	CTCF.p2:3:0.950
chr8	128196877	128197033	reg1028895.p1	4.752	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-626231	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-626400	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1233542	-	DQ486513 NM_001159542	230901	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	551370	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	551535	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.0	
chr9	130549214	130549302	reg1018356.p2	4.752	+	TSC_hg19_v1_chr9_+_130548375 L25676 BC001968 AK313828 AB590139 DQ891182 DQ894364 DQ894365 AB451289 AB451421 BT019903	-866	+	TSC_hg19_v1_chr9_+_130548326 X80230	-923	+	NM_001261 TSC_hg19_v1_chr9_+_130548312	-950	+	TSC_hg19_v1_chr9_+_130565171 NM_004957 AK315523 AK295309 BC064393 BC009901 BT006639 BC007121 M98045	15978	+	TSC_hg19_v1_chr9_+_130565522 NM_001018078 AY007210	16231	+	TSC_hg19_v1_chr9_+_130565577 AK056920	16327	+	L25676|CDK9|1025|cyclin-dependent kinase 9##BC001968|CDK9|1025|cyclin-dependent kinase 9##AK313828|CDK9|1025|cyclin-dependent kinase 9##DQ891182|CDK9|1025|cyclin-dependent kinase 9##DQ894364|CDK9|1025|cyclin-dependent kinase 9##DQ894365|CDK9|1025|cyclin-dependent kinase 9##AB451289|CDK9|1025|cyclin-dependent kinase 9##AB451421|CDK9|1025|cyclin-dependent kinase 9##BT019903|CDK9|1025|cyclin-dependent kinase 9##X80230|CDK9|1025|cyclin-dependent kinase 9##NM_001261|CDK9|1025|cyclin-dependent kinase 9##NM_004957|FPGS|2356|folylpolyglutamate synthase##AK315523|FPGS|2356|folylpolyglutamate synthase##AK295309|FPGS|2356|folylpolyglutamate synthase##BC064393|FPGS|2356|folylpolyglutamate synthase##BC009901|FPGS|2356|folylpolyglutamate synthase##BT006639|FPGS|2356|folylpolyglutamate synthase##BC007121|FPGS|2356|folylpolyglutamate synthase##M98045|FPGS|2356|folylpolyglutamate synthase##NM_001018078|FPGS|2356|folylpolyglutamate synthase##AY007210|FPGS|2356|folylpolyglutamate synthase##AK056920|FPGS|2356|folylpolyglutamate synthase	0.176853	
chr11	109897985	109898165	reg1030930.p1	4.751	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-605176	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-605232	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-1362261	+	AK095101 TSC_hg19_v1_chr11_+_109963524	65453	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	66055	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	269238	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.0	
chr1	208209685	208209814	reg1032461.p1	4.751	+	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	-125192	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	-125366	-	BX640941 TSC_hg19_v1_chr1_-_208059392	-150426	-	TSC_hg19_v1_chr1_-_208417635 NM_025179	207900	-	AK091113 AX746785 NM_001104548	1392416	+	NM_020439 AK095713 AK289675 AF428261 BC032787	1547311	+	BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##NM_025179|PLXNA2|5362|plexin A2##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG	0.561266	CTCF.p2:-4:0.561
chr16	70234140	70234280	reg1030840.p1	4.751	+	AF448856 BC039068 NM_173619 AL833339 AK074773 CU687316 BC062573	-26106	+	TSC_hg19_v1_chr16_+_70148247 AK292502 AK302987	-85963	+	AB082521 BC150251 NM_017990	-86682	+	TSC_hg19_v1_chr16_-_70285844 BC052252 NM_058219 BC039194	51623	-	BC011451 TSC_hg19_v1_chr16_-_70323364 AK299098	89157	-	TSC_hg19_v1_chr16_-_70323413 AK222824 AK225116 AK307782 D32050 NM_001605	89201	-	AF448856|CLEC18C|283971|C-type lectin domain family 18, member C##BC039068|CLEC18C|283971|C-type lectin domain family 18, member C##NM_173619|CLEC18C|283971|C-type lectin domain family 18, member C##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##BC062573|CLEC18C|283971|C-type lectin domain family 18, member C##AK292502|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##AK302987|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##AB082521|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##BC150251|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##NM_017990|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##BC052252|EXOSC6|118460|exosome component 6##NM_058219|EXOSC6|118460|exosome component 6##BC011451|AARS|16|alanyl-tRNA synthetase##AK299098|AARS|16|alanyl-tRNA synthetase##AK222824|AARS|16|alanyl-tRNA synthetase##AK225116|AARS|16|alanyl-tRNA synthetase##AK307782|AARS|16|alanyl-tRNA synthetase##D32050|AARS|16|alanyl-tRNA synthetase##NM_001605|AARS|16|alanyl-tRNA synthetase	0.983076	CTCF.p2:20:0.983
chr20	42033628	42033809	reg1028262.p1	4.751	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	-215208	-	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-1786657	-	AB089149 NM_052846	-2038221	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	52774	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	52885	+	TSC_hg19_v1_chr20_+_42136336 NM_032107 AK299199	102626	+	AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6##NM_032107|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK299199|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)	0.0	
chr6_cox_hap2	2971342	2971444	reg1028621.p1	4.751	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr7	22213939	22214059	reg1028059.p1	4.751	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-228517	-	AJ320497 NM_003777	-631167	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-745675	+	AL833195 NM_012294	182522	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	325848	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	552824	+	AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)	0.0	
chr1	19233750	19233872	reg1009807.p2	4.750	+	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-4657	-	AK294552 NM_001161504	-16427	-	NM_152232 AB527225	-47656	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	48988	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	302935	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	344181	-	DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##NM_001136265|IFFO2|126917|intermediate filament family orphan 2##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090	0.228595	CTCF.p2:9:0.229
chr12	92860931	92861041	reg1030971.p2	4.750	+	AJ845168 NM_001025232	-39063	-	AJ845165 AJ845166 NM_001025233	-43252	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-321343	-	NM_001037671 NM_001178097	235632	+	NM_001004330 AK128530	269301	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	461952	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr14	24640833	24640954	reg1030045.p1	4.750	+	NM_006084 TSC_hg19_v1_chr14_+_24630473 AK308347 AK295467 M87503	-10417	+	TSC_hg19_v1_chr14_+_24616708 AK000973 AK225832 BC012077	-24171	+	NM_017999 TSC_hg19_v1_chr14_+_24616706 AK291247	-24211	+	TSC_hg19_v1_chr14_+_24641084 AK291191	199	+	TSC_hg19_v1_chr14_+_24641288 AK001435 NM_001048205 NM_005132 BC010887 AL832973	380	+	TSC_hg19_v1_chr14_-_24658004 AF411122 AK057044 AK056702 AK094897 AK314305 BX248267	17104	-	NM_006084|IRF9|10379|interferon regulatory factor 9##AK308347|IRF9|10379|interferon regulatory factor 9##AK295467|IRF9|10379|interferon regulatory factor 9##M87503|IRF9|10379|interferon regulatory factor 9##AK000973|RNF31|55072|ring finger protein 31##AK225832|RNF31|55072|ring finger protein 31##BC012077|RNF31|55072|ring finger protein 31##NM_017999|RNF31|55072|ring finger protein 31##AK291247|RNF31|55072|ring finger protein 31##AK291191|REC8|9985|REC8 homolog (yeast)##AK001435|REC8|9985|REC8 homolog (yeast)##NM_001048205|REC8|9985|REC8 homolog (yeast)##NM_005132|REC8|9985|REC8 homolog (yeast)##BC010887|REC8|9985|REC8 homolog (yeast)##AL832973|REC8|9985|REC8 homolog (yeast)##AF411122|IPO4|79711|importin 4##AK057044|IPO4|79711|importin 4##AK056702|IPO4|79711|importin 4##AK094897|IPO4|79711|importin 4##AK314305|IPO4|79711|importin 4##BX248267|IPO4|79711|importin 4	0.0	
chr14	77618674	77618810	reg1028289.p1	4.750	+	AK294840 TSC_hg19_v1_chr14_-_77608135 AK095612 NM_174976	-10607	-	BC117676 TSC_hg19_v1_chr14_-_77608072	-10727	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	-54097	+	TSC_hg19_v1_chr14_+_77648082 NM_020431	29350	+	TSC_hg19_v1_chr14_+_77648137 AK125159 BC136613 BC136614	29431	+	TSC_hg19_v1_chr14_-_77737552 AF422797 NM_021257	118859	-	AK294840|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK095612|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_174976|ZDHHC22|283576|zinc finger, DHHC-type containing 22##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##NM_020431|TMEM63C|57156|transmembrane protein 63C##AK125159|TMEM63C|57156|transmembrane protein 63C##BC136613|TMEM63C|57156|transmembrane protein 63C##BC136614|TMEM63C|57156|transmembrane protein 63C##AF422797|NGB|58157|neuroglobin##NM_021257|NGB|58157|neuroglobin	0.999351	CTCF.p2:-40:0.999
chr17	73749882	73749971	reg1031226.p2	4.750	+	BC109238 TSC_hg19_v1_chr17_+_73723807	-26155	+	NM_001005619 X52186 AF011375	-29147	+	BC118916 TSC_hg19_v1_chr17_+_73717603 AB208913	-32325	+	BT007005 CU674592 TSC_hg19_v1_chr17_-_73761274 U26401 AK316181 AK314890 AK303748 BC001166 AK130064 AK310203 NM_000154 AK303832	11355	-	L05088 TSC_hg19_v1_chr17_-_73774461	24529	-	BC108701 AF218029 BC001124 BC006497 BC012813 BC017558 TSC_hg19_v1_chr17_-_73775861 BX647280 AK130772 AK304607 AK312762 BX537379 NM_005324	25915	-	BC109238|ITGB4|3691|integrin, beta 4##NM_001005619|ITGB4|3691|integrin, beta 4##X52186|ITGB4|3691|integrin, beta 4##AF011375|ITGB4|3691|integrin, beta 4##BC118916|ITGB4|3691|integrin, beta 4##AB208913|ITGB4|3691|integrin, beta 4##BT007005|GALK1|2584|galactokinase 1##U26401|GALK1|2584|galactokinase 1##AK316181|GALK1|2584|galactokinase 1##AK314890|GALK1|2584|galactokinase 1##AK303748|GALK1|2584|galactokinase 1##BC001166|GALK1|2584|galactokinase 1##AK130064|GALK1|2584|galactokinase 1##AK310203|GALK1|2584|galactokinase 1##NM_000154|GALK1|2584|galactokinase 1##AK303832|GALK1|2584|galactokinase 1##BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)##AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)##NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)	0.916757	CTCF.p2:21:0.917
chr19	10806637	10806741	reg1027846.p2	4.750	+	TSC_hg19_v1_chr19_+_10791025 AJ271747	-15641	+	AB528039 AF167569 AF167570 CU687952 HQ322263 HQ322264 HQ322265 TSC_hg19_v1_chr19_+_10781789	-24963	+	TSC_hg19_v1_chr19_+_10765110 AF141870	-41521	+	NM_031209 TSC_hg19_v1_chr19_+_10812129 AK314308 AK057877 AK225173 AK294166 AF302783 AF370379 BC015350 AF302784	5469	+	TSC_hg19_v1_chr19_+_10828738 NM_001005360 NM_001005361 NM_001005362 NM_001190716 NM_004945	22043	+	TSC_hg19_v1_chr19_+_10828754 AK312260	22065	+	AF167569|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##AF167570|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##HQ322263|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##HQ322264|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##HQ322265|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##AF141870|ILF3|3609|interleukin enhancer binding factor 3, 90kDa##NM_031209|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AK314308|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AK057877|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AK225173|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AK294166|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AF302783|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AF370379|QTRT1|81890|queuine tRNA-ribosyltransferase 1##BC015350|QTRT1|81890|queuine tRNA-ribosyltransferase 1##AF302784|QTRT1|81890|queuine tRNA-ribosyltransferase 1##NM_001005360|DNM2|1785|dynamin 2##NM_001005361|DNM2|1785|dynamin 2##NM_001005362|DNM2|1785|dynamin 2##NM_001190716|DNM2|1785|dynamin 2##NM_004945|DNM2|1785|dynamin 2##AK312260|DNM2|1785|dynamin 2	0.0	
chr2	9516317	9516432	reg1030178.p2	4.750	+	TSC_hg19_v1_chr2_+_9346940 BC063308	-169415	+	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	-169482	+	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	-372553	-	TSC_hg19_v1_chr2_-_9563308 AK093179	46968	-	AK092115 AX747361 TSC_hg19_v1_chr2_-_9563586	47211	-	TSC_hg19_v1_chr2_-_9563587 BC012264 AK299017 AK289817 BX647099 AF012023 AF012024 NM_004763 NM_022334	47240	-	BC063308|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK093179|ITGB1BP1|9270|integrin beta 1 binding protein 1##AK092115|ITGB1BP1|9270|integrin beta 1 binding protein 1##BC012264|ITGB1BP1|9270|integrin beta 1 binding protein 1##AK299017|ITGB1BP1|9270|integrin beta 1 binding protein 1##AK289817|ITGB1BP1|9270|integrin beta 1 binding protein 1##BX647099|ITGB1BP1|9270|integrin beta 1 binding protein 1##AF012023|ITGB1BP1|9270|integrin beta 1 binding protein 1##AF012024|ITGB1BP1|9270|integrin beta 1 binding protein 1##NM_004763|ITGB1BP1|9270|integrin beta 1 binding protein 1##NM_022334|ITGB1BP1|9270|integrin beta 1 binding protein 1	0.360893	CTCF.p2:-11:0.361
chr9	115479956	115480087	reg1030242.p1	4.750	+	TSC_hg19_v1_chr9_+_115336888 AK056181	-143091	+	BC105048 BC113515 BC143372 BC143424 TSC_hg19_v1_chr9_+_115249466	-230609	+	TSC_hg19_v1_chr9_+_115249149 AK096613 NM_133465	-230859	+	AF161411 TSC_hg19_v1_chr9_-_115480339 AF161409	317	-	TSC_hg19_v1_chr9_-_115480398 BC065210 AK310007 BC014881 NM_021218 AK000637	367	-	TSC_hg19_v1_chr9_+_115513056 NM_001012994	33070	+	AK056181|KIAA1958|158405|KIAA1958##BC105048|KIAA1958|158405|KIAA1958##BC113515|KIAA1958|158405|KIAA1958##BC143372|KIAA1958|158405|KIAA1958##BC143424|KIAA1958|158405|KIAA1958##AK096613|KIAA1958|158405|KIAA1958##NM_133465|KIAA1958|158405|KIAA1958##AF161411|C9orf80|58493|chromosome 9 open reading frame 80##AF161409|C9orf80|58493|chromosome 9 open reading frame 80##BC065210|C9orf80|58493|chromosome 9 open reading frame 80##AK310007|C9orf80|58493|chromosome 9 open reading frame 80##BC014881|C9orf80|58493|chromosome 9 open reading frame 80##NM_021218|C9orf80|58493|chromosome 9 open reading frame 80##AK000637|C9orf80|58493|chromosome 9 open reading frame 80##NM_001012994|SNX30|401548|sorting nexin family member 30	0.120885	
chr11	102389574	102389706	reg1034641.p1	4.749	+	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-66027	-	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-171612	+	TSC_hg19_v1_chr11_+_102217944 AK303197	-171711	+	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	11819	-	AB527354 NM_004771 Y12779	106415	-	AB527320 AF195192 AY358752 NM_022122	186815	-	DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##AK303197|BIRC2|329|baculoviral IAP repeat containing 2##DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27	0.853502	CTCF.p2:3:0.854
chr1	26857778	26857874	reg1026415.p1	4.749	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-1491	+	TSC_hg19_v1_chr1_+_26856253 AK225672	-1573	+	TSC_hg19_v1_chr1_+_26856251 NM_002953	-1581	+	TSC_hg19_v1_chr1_+_26872335 AK092955	14497	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	14532	+	NM_006015 NM_139135 AF231056	164696	+	BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK225672|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_002953|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.459216	CTCF.p2:-14:0.459
chr1	51986632	51986813	reg1032073.p1	4.749	+	NM_001981 Z29064 TSC_hg19_v1_chr1_-_51985031	-1698	-	DQ367924 AB384758 BC054006 TSC_hg19_v1_chr1_-_51984939 AK129853 U07707 AK313396	-1799	-	AK090936 AX746691 AK308128 BX647676 NM_001159969	-98956	-	NM_024586 NM_148906 NM_148908 NM_148909	95823	+	TSC_hg19_v1_chr1_+_52082763 AK056617 AK091703 AK027535 AF392445 AY178997	96045	+	TSC_hg19_v1_chr1_+_52195487 NM_148904 NM_148905 NM_148907 AK315167	208755	+	NM_001981|EPS15|2060|epidermal growth factor receptor pathway substrate 15##Z29064|EPS15|2060|epidermal growth factor receptor pathway substrate 15##DQ367924|EPS15|2060|epidermal growth factor receptor pathway substrate 15##BC054006|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK129853|EPS15|2060|epidermal growth factor receptor pathway substrate 15##U07707|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK313396|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15##BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15##NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15##NM_024586|OSBPL9|114883|oxysterol binding protein-like 9##NM_148906|OSBPL9|114883|oxysterol binding protein-like 9##NM_148908|OSBPL9|114883|oxysterol binding protein-like 9##NM_148909|OSBPL9|114883|oxysterol binding protein-like 9##AK056617|OSBPL9|114883|oxysterol binding protein-like 9##AK091703|OSBPL9|114883|oxysterol binding protein-like 9##AK027535|OSBPL9|114883|oxysterol binding protein-like 9##AF392445|OSBPL9|114883|oxysterol binding protein-like 9##AY178997|OSBPL9|114883|oxysterol binding protein-like 9##NM_148904|OSBPL9|114883|oxysterol binding protein-like 9##NM_148905|OSBPL9|114883|oxysterol binding protein-like 9##NM_148907|OSBPL9|114883|oxysterol binding protein-like 9##AK315167|OSBPL9|114883|oxysterol binding protein-like 9	0.0	
chr22	34249925	34250074	reg1027002.p2	4.749	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-795644	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-847273	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-1052247	+	AJ007583 AB011181 NM_004737 NM_133642	66371	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1212150	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1403477	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr5	138923062	138923215	reg1028392.p1	4.749	+	NM_198282 TSC_hg19_v1_chr5_-_138862344	-60795	-	TSC_hg19_v1_chr5_-_138862306 AK095896 AX775913 BC047779 AK290661	-60866	-	AK304726 BC146912 BC146913 DQ462572 NM_001077693 EU025066 TSC_hg19_v1_chr5_-_138842329	-80828	-	TSC_hg19_v1_chr5_+_138940760 BC033349 NM_003339 NM_181838 BC048426	17635	+	TSC_hg19_v1_chr5_+_138940966 AK001428 BC019052 AK001311 AY651263	17787	+	TSC_hg19_v1_chr5_+_138941350 U39317 AB590980	18210	+	NM_198282|TMEM173|340061|transmembrane protein 173##AK095896|TMEM173|340061|transmembrane protein 173##AX775913|TMEM173|340061|transmembrane protein 173##BC047779|TMEM173|340061|transmembrane protein 173##AK290661|TMEM173|340061|transmembrane protein 173##BC146912|ECSCR|641700|endothelial cell-specific chemotaxis regulator##BC146913|ECSCR|641700|endothelial cell-specific chemotaxis regulator##DQ462572|ECSCR|641700|endothelial cell-specific chemotaxis regulator##NM_001077693|ECSCR|641700|endothelial cell-specific chemotaxis regulator##EU025066|ECSCR|641700|endothelial cell-specific chemotaxis regulator##BC033349|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_003339|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_181838|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC048426|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001428|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC019052|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001311|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AY651263|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##U39317|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2	0.296653	CTCF.p2:-20:0.297
chr5	67611563	67611743	reg1030210.p1	4.749	+	AK094785 NM_001242466 AK294919	-23201	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-25107	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-27359	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	778150	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	778229	+	AK292925 TSC_hg19_v1_chr5_+_68389913	778260	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.0	
chr9	98142067	98142209	reg1028483.p1	4.749	+	AK312548 AK222871 TSC_hg19_v1_chr9_-_98079974 BC015748 X66893 AK304887 NM_000136 NM_001243744	-62207	-	X66894 NM_001243743	-62618	-	AK298959 TSC_hg19_v1_chr9_+_97766501 AK300486	-375663	+	TSC_hg19_v1_chr9_-_98268874 AB209495 AB233423 AB233424 CU692174	126735	-	AB189440 NM_001083607	127342	-	TSC_hg19_v1_chr9_-_98269686 NM_001083606 U43148	127562	-	AK312548|FANCC|2176|Fanconi anemia, complementation group C##AK222871|FANCC|2176|Fanconi anemia, complementation group C##BC015748|FANCC|2176|Fanconi anemia, complementation group C##X66893|FANCC|2176|Fanconi anemia, complementation group C##AK304887|FANCC|2176|Fanconi anemia, complementation group C##NM_000136|FANCC|2176|Fanconi anemia, complementation group C##NM_001243744|FANCC|2176|Fanconi anemia, complementation group C##X66894|FANCC|2176|Fanconi anemia, complementation group C##NM_001243743|FANCC|2176|Fanconi anemia, complementation group C##AK298959|C9orf3|84909|chromosome 9 open reading frame 3##AK300486|C9orf3|84909|chromosome 9 open reading frame 3##AB209495|PTCH1|5727|patched 1##AB233423|PTCH1|5727|patched 1##AB233424|PTCH1|5727|patched 1##AB189440|PTCH1|5727|patched 1##NM_001083607|PTCH1|5727|patched 1##NM_001083606|PTCH1|5727|patched 1##U43148|PTCH1|5727|patched 1	0.285738	CTCF.p2:-30:0.286
chr6	127875695	127875831	reg1028461.p1	4.748	+	NM_001012279	-35264	-	NM_014702	-95229	-	TSC_hg19_v1_chr6_-_127664710 AL834469 BC003549 AF220192 NM_001002030 NM_001105544 NM_001105545 NM_018479	-211041	-	AK303850 BC062712 NM_001010905	22555	+	AK292046 AK097903 BC144034 BC130516 NM_001010923 NM_001164685	346437	-	AK124031 NM_001164687	363995	-	NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174##NM_014702|KIAA0408|9729|KIAA0408##AL834469|ECHDC1|55862|enoyl CoA hydratase domain containing 1##BC003549|ECHDC1|55862|enoyl CoA hydratase domain containing 1##AF220192|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001002030|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001105544|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001105545|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_018479|ECHDC1|55862|enoyl CoA hydratase domain containing 1##AK303850|C6orf58|352999|chromosome 6 open reading frame 58##BC062712|C6orf58|352999|chromosome 6 open reading frame 58##NM_001010905|C6orf58|352999|chromosome 6 open reading frame 58##AK292046|THEMIS|387357|thymocyte selection associated##AK097903|THEMIS|387357|thymocyte selection associated##BC144034|THEMIS|387357|thymocyte selection associated##BC130516|THEMIS|387357|thymocyte selection associated##NM_001010923|THEMIS|387357|thymocyte selection associated##NM_001164685|THEMIS|387357|thymocyte selection associated##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated	0.036609	
chr6	52441489	52441623	reg1029960.p1	4.748	+	AK297632 NM_001172420	-155752	+	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	-156478	+	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	-214599	+	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	202	-	TSC_hg19_v1_chr6_-_52441859 AK291751 AB621814 BC028121 NM_012288	295	-	AK095117 TSC_hg19_v1_chr6_+_52442225	618	+	AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2##AK291751|TRAM2|9697|translocation associated membrane protein 2##BC028121|TRAM2|9697|translocation associated membrane protein 2##NM_012288|TRAM2|9697|translocation associated membrane protein 2##AK095117|FLJ37798|401264|uncharacterized LOC401264	0.137439	
chr2	66028254	66028390	reg1030967.p1	4.747	+	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	-364485	+	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	-368646	-	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	-369110	-	AL832770 BC043503 NM_002398	634201	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	634518	+	TSC_hg19_v1_chr2_+_66666452 AK297109	638128	+	AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein##BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AL832770|MEIS1|4211|Meis homeobox 1##BC043503|MEIS1|4211|Meis homeobox 1##NM_002398|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##AK297109|MEIS1|4211|Meis homeobox 1	0.99763	CTCF.p2:8:0.998
chr1	44412428	44412547	reg1021205.p2	4.746	+	TSC_hg19_v1_chr1_+_44412483 NM_014652	-26	+	AF120274 NM_001136215 NM_057090 NM_057091	-13496	+	AK301829 AY051143 NM_006279 NM_174963 NM_174964 NM_174965 NM_174966 NM_174967 NM_174968 NM_174969 NM_174970 NM_174971 TSC_hg19_v1_chr1_+_44173217 BC050380	-239269	+	TSC_hg19_v1_chr1_+_44412625 AB018267	123	+	TSC_hg19_v1_chr1_+_44412640 BC008194	175	+	TSC_hg19_v1_chr1_+_44435681 NM_001039589 NM_001384 AK315506 BC003181 AK297933 AK091303 AX746904 BC001389 BC016956 AF053003 BT007431	23261	+	NM_014652|IPO13|9670|importin 13##AF120274|ARTN|9048|artemin##NM_001136215|ARTN|9048|artemin##NM_057090|ARTN|9048|artemin##NM_057091|ARTN|9048|artemin##AK301829|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##AY051143|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_006279|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174963|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174964|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174965|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174966|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174967|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174968|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174969|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174970|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174971|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC050380|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##AB018267|IPO13|9670|importin 13##BC008194|IPO13|9670|importin 13##NM_001039589|DPH2|1802|DPH2 homolog (S. cerevisiae)##NM_001384|DPH2|1802|DPH2 homolog (S. cerevisiae)##AK315506|DPH2|1802|DPH2 homolog (S. cerevisiae)##BC003181|DPH2|1802|DPH2 homolog (S. cerevisiae)##AK297933|DPH2|1802|DPH2 homolog (S. cerevisiae)##AK091303|DPH2|1802|DPH2 homolog (S. cerevisiae)##BC001389|DPH2|1802|DPH2 homolog (S. cerevisiae)##BC016956|DPH2|1802|DPH2 homolog (S. cerevisiae)##AF053003|DPH2|1802|DPH2 homolog (S. cerevisiae)##BT007431|DPH2|1802|DPH2 homolog (S. cerevisiae)	0.0	
chr17	64709810	64709930	reg1024944.p1	4.746	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	-410943	+	TSC_hg19_v1_chr17_+_64298733 BC053321	-411120	+	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	-484345	-	AK290171 TSC_hg19_v1_chr17_+_64831234	121365	+	BC101633 NM_145811 BC101607 AF361351 AF458898	163550	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	251019	+	NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##BC053321|PRKCA|5578|protein kinase C, alpha##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	0.0	
chr7	5821312	5821441	reg1027593.p1	4.746	+	BC004947 TSC_hg19_v1_chr7_-_5821284 AK297231 BC063825 AK092767 AX747717 AK297416 BX537406 NM_207111 NM_207116 AK292396	-67	-	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	-154	-	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	-188866	+	TSC_hg19_v1_chr7_+_5862791 AK291169 AK096288	41409	+	TSC_hg19_v1_chr7_+_5862862 AX721099	41490	+	BC147028 BC147029 BC113704 BC113706 NM_001097622 CU686830 BC069468 BC069512 BC069550 HQ258718	99097	+	BC004947|RNF216|54476|ring finger protein 216##AK297231|RNF216|54476|ring finger protein 216##BC063825|RNF216|54476|ring finger protein 216##AK092767|RNF216|54476|ring finger protein 216##AK297416|RNF216|54476|ring finger protein 216##BX537406|RNF216|54476|ring finger protein 216##NM_207111|RNF216|54476|ring finger protein 216##NM_207116|RNF216|54476|ring finger protein 216##AK292396|RNF216|54476|ring finger protein 216##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216##BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK291169|ZNF815|401303|zinc finger protein 815##AK096288|ZNF815|401303|zinc finger protein 815##BC147028|OCM|654231|oncomodulin##BC147029|OCM|654231|oncomodulin##BC113704|OCM|654231|oncomodulin##BC113706|OCM|654231|oncomodulin##NM_001097622|OCM|654231|oncomodulin##BC069468|OCM|654231|oncomodulin##BC069512|OCM|654231|oncomodulin##BC069550|OCM|654231|oncomodulin##HQ258718|OCM|654231|oncomodulin	0.298863	CTCF.p2:-49:0.299
chr7	66119172	66119352	reg1026659.p1	4.746	+	BC042482 TSC_hg19_v1_chr7_+_66093944 AK056631 AK127790	-25320	+	TSC_hg19_v1_chr7_+_66093867 NM_001167961 NM_153033	-25388	+	TSC_hg19_v1_chr7_-_66057374 BC080520 BC057835 BC067867 AK310548 BC103766 AK310370 AK296922	-61901	-	TSC_hg19_v1_chr7_+_66147121 AK056864	27878	+	NM_014504 TSC_hg19_v1_chr7_+_66205645	86382	+	TSC_hg19_v1_chr7_+_66205692 BC015330	86432	+	BC042482|KCTD7|154881|potassium channel tetramerisation domain containing 7##AK056631|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_001167961|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_153033|KCTD7|154881|potassium channel tetramerisation domain containing 7##AK310548|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##BC103766|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK310370|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK296922|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK056864|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##NM_014504|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##BC015330|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1	0.020043	
chr8	128192400	128192580	reg1028908.p2	4.746	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-621766	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-621935	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1229077	-	DQ486513 NM_001159542	235366	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	555835	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	556000	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.0	
chr11	73702935	73703086	reg1028167.p2	4.745	+	TSC_hg19_v1_chr11_-_73694300 AK025742	-8667	-	TSC_hg19_v1_chr11_-_73693886 AK222540 AK222557 NM_003355	-9125	-	U94592 BC011737 TSC_hg19_v1_chr11_-_73693862	-9166	-	NM_003356 NM_022803	17271	-	TSC_hg19_v1_chr11_-_73881923 AB231764 AK092089 AX747350 BC037429 NM_015531	179058	-	TSC_hg19_v1_chr11_+_73882299 AK022725	179272	+	AK025742|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##BC011737|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003356|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##NM_022803|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3##AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3##NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3##AK022725|PPME1|51400|protein phosphatase methylesterase 1	0.0	
chr12	99333262	99333392	reg1028937.p1	4.745	+	AY356353 AK315954 AM980945 AK294994 TSC_hg19_v1_chr12_-_99288638 AK295988 NM_001204065 NM_001204079 NM_001204080 NM_001204081	-44740	-	AK307509 TSC_hg19_v1_chr12_+_99039067 AF013263 NM_001160 NM_013229 NM_181861 NM_181868 NM_181869	-294330	+	TSC_hg19_v1_chr12_-_99038755 AK123069	-294522	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	215230	-	AK294191 NM_001204067	215540	-	NM_153364 AK312767 BC031221	708203	+	AY356353|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK315954|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AM980945|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294994|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK295988|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204065|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204079|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204080|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204081|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK307509|APAF1|317|apoptotic peptidase activating factor 1##AF013263|APAF1|317|apoptotic peptidase activating factor 1##NM_001160|APAF1|317|apoptotic peptidase activating factor 1##NM_013229|APAF1|317|apoptotic peptidase activating factor 1##NM_181861|APAF1|317|apoptotic peptidase activating factor 1##NM_181868|APAF1|317|apoptotic peptidase activating factor 1##NM_181869|APAF1|317|apoptotic peptidase activating factor 1##AK123069|IKBIP|121457|IKBKB interacting protein##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_153364|FAM71C|196472|family with sequence similarity 71, member C##AK312767|FAM71C|196472|family with sequence similarity 71, member C##BC031221|FAM71C|196472|family with sequence similarity 71, member C	0.0	
chr13	66501070	66501175	reg1023925.p1	4.745	+	AK289924 NM_022843	-4511468	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-4511869	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-5529643	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	1303382	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	4181419	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	5939137	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.089716	
chr14	96159759	96159894	reg1029383.p1	4.745	+	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	-7048	+	TSC_hg19_v1_chr14_+_96001402 DQ083331	-158393	+	AB223038 TSC_hg19_v1_chr14_+_96001383	-158443	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	20641	-	AK023027 TSC_hg19_v1_chr14_+_96342762	182919	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	345820	+	BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##DQ083331|GLRX5|51218|glutaredoxin 5##AB223038|GLRX5|51218|glutaredoxin 5##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##AK023027|LOC100507043|100507043|uncharacterized LOC100507043##NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132	0.766397	CTCF.p2:-4:0.766
chr15	40615594	40615724	reg1027622.p2	4.745	+	TSC_hg19_v1_chr15_-_40600137 AK291657 NM_004573	-15514	-	TSC_hg19_v1_chr15_-_40600085 BC009009	-15572	-	BC136467 M95678 TSC_hg19_v1_chr15_-_40600050	-15619	-	TSC_hg19_v1_chr15_-_40630272 BC140897 BC140902 AK126035	14643	-	TSC_hg19_v1_chr15_-_40633122 AK125329 NM_207380	17485	-	TSC_hg19_v1_chr15_+_40643233 NM_001145643 BC061640	27576	+	AK291657|PLCB2|5330|phospholipase C, beta 2##NM_004573|PLCB2|5330|phospholipase C, beta 2##BC009009|PLCB2|5330|phospholipase C, beta 2##BC136467|PLCB2|5330|phospholipase C, beta 2##M95678|PLCB2|5330|phospholipase C, beta 2##BC140897|C15orf52|388115|chromosome 15 open reading frame 52##BC140902|C15orf52|388115|chromosome 15 open reading frame 52##AK126035|C15orf52|388115|chromosome 15 open reading frame 52##AK125329|C15orf52|388115|chromosome 15 open reading frame 52##NM_207380|C15orf52|388115|chromosome 15 open reading frame 52##NM_001145643|PHGR1|644844|proline/histidine/glycine-rich 1##BC061640|PHGR1|644844|proline/histidine/glycine-rich 1	0.737355	CTCF.p2:1:0.490	CTCF.p2:-86:0.248
chr16	18957337	18957518	reg1021778.p1	4.745	+	TSC_hg19_v1_chr16_-_18937724 NM_015092 AB061371	-19696	-	AK301636 CU679669 TSC_hg19_v1_chr16_-_18812870 BC010281 D31885 NM_015161 AK291137 AK308092 BX648446 AK300825 AK300869 AK307315	-144645	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	-155772	-	AK094664 NM_024847 TSC_hg19_v1_chr16_+_18995296 AY236498 BC047719 AY263165 BC036205 AK293874 CU690480	37892	+	TSC_hg19_v1_chr16_+_18995511 CR933669 NM_001160364	38131	+	AK315470 NM_016138 TSC_hg19_v1_chr16_+_19078935 BC003185 AK024291	121503	+	NM_015092|SMG1|23049|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)##AB061371|SMG1|23049|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)##AK301636|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BC010281|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##D31885|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##NM_015161|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK291137|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK308092|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BX648446|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK300825|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK300869|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK307315|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a##AK094664|TMC7|79905|transmembrane channel-like 7##NM_024847|TMC7|79905|transmembrane channel-like 7##AY236498|TMC7|79905|transmembrane channel-like 7##BC047719|TMC7|79905|transmembrane channel-like 7##AY263165|TMC7|79905|transmembrane channel-like 7##BC036205|TMC7|79905|transmembrane channel-like 7##AK293874|TMC7|79905|transmembrane channel-like 7##CR933669|TMC7|79905|transmembrane channel-like 7##NM_001160364|TMC7|79905|transmembrane channel-like 7##AK315470|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_016138|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC003185|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK024291|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)	0.0	
chr2	74378671	74378779	reg1030003.p2	4.745	+	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	-3505	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	-3707	-	NM_144993	-105276	+	AL122062 TSC_hg19_v1_chr2_-_74382411	3656	-	AJ577474 CU678456 TSC_hg19_v1_chr2_-_74406014 AB016839 AK023321 AK001650 BC003398 NM_018221 AK021657	27182	-	AK057260 TSC_hg19_v1_chr2_-_74425749	46990	-	BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##AJ577474|MOB1A|55233|MOB kinase activator 1A##AB016839|MOB1A|55233|MOB kinase activator 1A##AK023321|MOB1A|55233|MOB kinase activator 1A##AK001650|MOB1A|55233|MOB kinase activator 1A##BC003398|MOB1A|55233|MOB kinase activator 1A##NM_018221|MOB1A|55233|MOB kinase activator 1A##AK021657|MOB1A|55233|MOB kinase activator 1A	0.959354	CTCF.p2:15:0.959
chr3	179485955	179486080	reg1026820.p2	4.745	+	TSC_hg19_v1_chr3_+_179370901 NM_003940 U75362 BC016146 AK290338 AM393315 AM393392 AM393610 AM393780 DQ892472 DQ895684	-115122	+	TSC_hg19_v1_chr3_+_179322594 NM_001199957 NM_001199958 NM_002492 BX648034 BC005271 BC009796 AK313822 AF047181 BC093071 BC017909 CU679497	-163424	+	AY212270 BC032522 TSC_hg19_v1_chr3_-_179322427 BC021575 NM_020409 NM_177988	-163595	-	AB032593 NM_016559 AB032592 TSC_hg19_v1_chr3_-_179754937 AK299633 AK294501 AK314283 BC036183	268709	-	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	833986	+	AB075860 TSC_hg19_v1_chr3_+_180320970	834946	+	NM_003940|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##U75362|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##BC016146|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AK290338|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393315|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393392|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393610|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393780|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ892472|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ895684|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##NM_001199957|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_001199958|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AY212270|MRPL47|57129|mitochondrial ribosomal protein L47##BC032522|MRPL47|57129|mitochondrial ribosomal protein L47##BC021575|MRPL47|57129|mitochondrial ribosomal protein L47##NM_020409|MRPL47|57129|mitochondrial ribosomal protein L47##NM_177988|MRPL47|57129|mitochondrial ribosomal protein L47##AB032593|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_016559|PEX5L|51555|peroxisomal biogenesis factor 5-like##AB032592|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK299633|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK294501|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK314283|PEX5L|51555|peroxisomal biogenesis factor 5-like##BC036183|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##AB075860|TTC14|151613|tetratricopeptide repeat domain 14	0.783576	CTCF.p2:-23:0.764
chr12	127410896	127411018	reg1031867.p2	4.744	+	NM_052907	-1599796	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-1860889	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-1861016	+	NM_001136103	1340990	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	1897486	-	BC043528 TSC_hg19_v1_chr12_+_129337985	1927027	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.0	
chr12	29151918	29152041	reg1029246.p1	4.744	+	AY289196 NM_018318 AB587421	-741839	+	TSC_hg19_v1_chr12_+_28343404 BC035168	-808568	+	NM_002820 NM_198965	-1027064	-	AL136843 TSC_hg19_v1_chr12_+_29302210 AK001324 AK314670 BC018460	150213	+	TSC_hg19_v1_chr12_+_29376598 BC022267 NM_018099 AK027756 AK129857 AK001927	224692	+	TSC_hg19_v1_chr12_-_29534081 BC064522	382096	-	AY289196|CCDC91|55297|coiled-coil domain containing 91##NM_018318|CCDC91|55297|coiled-coil domain containing 91##NM_002820|PTHLH|5744|parathyroid hormone-like hormone##NM_198965|PTHLH|5744|parathyroid hormone-like hormone##AL136843|FAR2|55711|fatty acyl CoA reductase 2##AK001324|FAR2|55711|fatty acyl CoA reductase 2##AK314670|FAR2|55711|fatty acyl CoA reductase 2##BC022267|FAR2|55711|fatty acyl CoA reductase 2##NM_018099|FAR2|55711|fatty acyl CoA reductase 2##AK027756|FAR2|55711|fatty acyl CoA reductase 2##AK129857|FAR2|55711|fatty acyl CoA reductase 2##AK001927|FAR2|55711|fatty acyl CoA reductase 2##BC064522|ERGIC2|51290|ERGIC and golgi 2	0.55062	CTCF.p2:-18:0.551
chr12	92428948	92429128	reg1027138.p2	4.744	+	NM_001920	-852233	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-852458	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-855727	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	110605	-	AJ845165 AJ845166 NM_001025233	388696	+	AJ845168 NM_001025232	392885	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.0	
chr6	134495904	134496056	reg1005448.p3	4.744	+	CU674630 Y10032 AF153609 BC001263 FM205710 TSC_hg19_v1_chr6_-_134496003 AK098509 AK295422 BX649005	-6	-	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	-122277	-	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	-221635	+	TSC_hg19_v1_chr6_-_134496010 NM_005627	39	-	FM205707 TSC_hg19_v1_chr6_-_134496850	881	-	NM_001143678 AK298688	1118	-	Y10032|SGK1|6446|serum/glucocorticoid regulated kinase 1##AF153609|SGK1|6446|serum/glucocorticoid regulated kinase 1##BC001263|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205710|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK098509|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK295422|SGK1|6446|serum/glucocorticoid regulated kinase 1##BX649005|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##NM_005627|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205707|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143678|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK298688|SGK1|6446|serum/glucocorticoid regulated kinase 1	0.0	
chr7	64593575	64593681	reg1027851.p1	4.744	+	TSC_hg19_v1_chr7_+_64498727 BX649060 BC071617	-94922	+	TSC_hg19_v1_chr7_-_64467066 AK295189 AK097499 NM_001007253	-126564	-	M55422 NM_015852	-142215	-	TSC_hg19_v1_chr7_+_64601445 AK057766	7892	+	TSC_hg19_v1_chr7_+_64838761 BX647875 NM_007139 NM_152626 BC040594	245122	+	TSC_hg19_v1_chr7_+_64838793 AK091618 AX747097 BC036439 M61872	245179	+	BX649060|CCT6P3|643180|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 3##BC071617|CCT6P3|643180|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 3##AK295189|ERV3-1|2086|endogenous retrovirus group 3, member 1##NM_001007253|ERV3-1|2086|endogenous retrovirus group 3, member 1##M55422|ZNF117|51351|zinc finger protein 117##NM_015852|ZNF117|51351|zinc finger protein 117##AK057766|INTS4L1|285905|integrator complex subunit 4-like 1##BX647875|ZNF92|168374|zinc finger protein 92##NM_007139|ZNF92|168374|zinc finger protein 92##NM_152626|ZNF92|168374|zinc finger protein 92##BC040594|ZNF92|168374|zinc finger protein 92##AK091618|ZNF92|168374|zinc finger protein 92##BC036439|ZNF92|168374|zinc finger protein 92##M61872|ZNF92|168374|zinc finger protein 92	0.015007	
chrX	133380456	133380581	reg1033652.p1	4.744	+	NM_001101357	-9442	+	TSC_hg19_v1_chrX_-_133119645 L47125 AK300168 NM_001164617 NM_001164618 NM_001164619 NM_004484	-260867	-	AB527294 CU690242 DQ349136 DQ349137 DQ349138 DQ893658 DQ895822 TSC_hg19_v1_chrX_-_133119622 Z37987 L47176 AK222761 AK222766 AK310689 BC035972 U50410	-260969	-	TSC_hg19_v1_chrX_+_133507317 AY157622 NM_001015877 NM_032335 NM_032458 AL832725 AK290095 AK303369 BC005994 AB058726	126859	+	TSC_hg19_v1_chrX_+_133594194 NM_000194 AK313435	213679	+	TSC_hg19_v1_chrX_+_133594225 M31642	213738	+	NM_001101357|CCDC160|347475|coiled-coil domain containing 160##L47125|GPC3|2719|glypican 3##AK300168|GPC3|2719|glypican 3##NM_001164617|GPC3|2719|glypican 3##NM_001164618|GPC3|2719|glypican 3##NM_001164619|GPC3|2719|glypican 3##NM_004484|GPC3|2719|glypican 3##DQ349136|GPC3|2719|glypican 3##DQ349137|GPC3|2719|glypican 3##DQ349138|GPC3|2719|glypican 3##DQ893658|GPC3|2719|glypican 3##DQ895822|GPC3|2719|glypican 3##Z37987|GPC3|2719|glypican 3##L47176|GPC3|2719|glypican 3##AK222761|GPC3|2719|glypican 3##AK222766|GPC3|2719|glypican 3##AK310689|GPC3|2719|glypican 3##BC035972|GPC3|2719|glypican 3##U50410|GPC3|2719|glypican 3##AY157622|PHF6|84295|PHD finger protein 6##NM_001015877|PHF6|84295|PHD finger protein 6##NM_032335|PHF6|84295|PHD finger protein 6##NM_032458|PHF6|84295|PHD finger protein 6##AL832725|PHF6|84295|PHD finger protein 6##AK290095|PHF6|84295|PHD finger protein 6##AK303369|PHF6|84295|PHD finger protein 6##BC005994|PHF6|84295|PHD finger protein 6##AB058726|PHF6|84295|PHD finger protein 6##NM_000194|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##AK313435|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##M31642|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1	0.196129	
chr11	128775910	128776019	reg1026289.p1	4.743	+	BC025756 NM_145013	-373	-	DQ891644 DQ894833 TSC_hg19_v1_chr11_-_128774571	-1435	-	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	-14624	+	AK125634 TSC_hg19_v1_chr11_-_128776110	150	-	AB527772 AY302135 NM_001195194 BC069399 BC069426	31786	-	NM_001195195 NM_001251964 NM_022112	37329	-	BC025756|C11orf45|219833|chromosome 11 open reading frame 45##NM_145013|C11orf45|219833|chromosome 11 open reading frame 45##DQ891644|C11orf45|219833|chromosome 11 open reading frame 45##DQ894833|C11orf45|219833|chromosome 11 open reading frame 45##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##AK125634|C11orf45|219833|chromosome 11 open reading frame 45##AY302135|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001195194|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##BC069399|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##BC069426|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001195195|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001251964|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_022112|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1	0.998382	CTCF.p2:15:0.998
chr1	8457680	8457860	reg1032008.p2	4.743	+	NM_001080397	-73381	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-371372	-	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	-371409	-	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	26247	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	419822	-	GU170215 NM_001201483	473864	-	NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##GU170215|ENO1|2023|enolase 1, (alpha)##NM_001201483|ENO1|2023|enolase 1, (alpha)	0.0	
chr19	41111564	41111700	reg1028227.p1	4.743	+	TSC_hg19_v1_chr19_+_41107274 AF051344 NM_001042545	-4383	+	TSC_hg19_v1_chr19_+_41105586 AK309484	-6053	+	TSC_hg19_v1_chr19_+_41103115 AF051345 NM_001042544	-8530	+	TSC_hg19_v1_chr19_+_41116099 AK303613	4483	+	TSC_hg19_v1_chr19_+_41119492 AK074499	7857	+	TSC_hg19_v1_chr19_+_41119819 AF054501	8216	+	AF051344|LTBP4|8425|latent transforming growth factor beta binding protein 4##NM_001042545|LTBP4|8425|latent transforming growth factor beta binding protein 4##AK309484|LTBP4|8425|latent transforming growth factor beta binding protein 4##AF051345|LTBP4|8425|latent transforming growth factor beta binding protein 4##NM_001042544|LTBP4|8425|latent transforming growth factor beta binding protein 4##AK074499|LTBP4|8425|latent transforming growth factor beta binding protein 4##AF054501|LTBP4|8425|latent transforming growth factor beta binding protein 4	0.0	
chr5	180577431	180577544	reg1026985.p1	4.743	+	AK298113 TSC_hg19_v1_chr5_+_180467271 BC062459	-110172	+	NM_152547 TSC_hg19_v1_chr5_+_180467233 AK057097 AY358358	-110250	+	NM_197975 AK025267 AY358385 BC100800 BC100801 BC100802	-161586	+	NM_206880	4455	+	AF396655 NM_203297	50442	-	AF396652 AF396653 NM_203294 NM_203295 NM_203296	53852	-	AK298113|BTNL9|153579|butyrophilin-like 9##BC062459|BTNL9|153579|butyrophilin-like 9##NM_152547|BTNL9|153579|butyrophilin-like 9##AK057097|BTNL9|153579|butyrophilin-like 9##AY358358|BTNL9|153579|butyrophilin-like 9##NM_197975|BTNL3|10917|butyrophilin-like 3##AK025267|BTNL3|10917|butyrophilin-like 3##AY358385|BTNL3|10917|butyrophilin-like 3##BC100800|BTNL3|10917|butyrophilin-like 3##BC100801|BTNL3|10917|butyrophilin-like 3##BC100802|BTNL3|10917|butyrophilin-like 3##NM_206880|OR2V2|285659|olfactory receptor, family 2, subfamily V, member 2##AF396655|TRIM7|81786|tripartite motif containing 7##NM_203297|TRIM7|81786|tripartite motif containing 7##AF396652|TRIM7|81786|tripartite motif containing 7##AF396653|TRIM7|81786|tripartite motif containing 7##NM_203294|TRIM7|81786|tripartite motif containing 7##NM_203295|TRIM7|81786|tripartite motif containing 7##NM_203296|TRIM7|81786|tripartite motif containing 7	0.0	
chr8	87905284	87905412	reg1027243.p1	4.743	+	AK093121 AX747937 BC117326 BC117328 NM_173538	-26675	+	BC150601 AF272900 NM_019098 DQ426865	-149436	-	AK292912 BC007017 BC008385 TSC_hg19_v1_chr8_+_87526694 BC066597 BC036242 AB014536 AF077226	-378637	+	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	980911	-	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	1434398	-	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	2864682	+	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3##AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3##NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3##AK292912|CPNE3|8895|copine III##BC007017|CPNE3|8895|copine III##BC008385|CPNE3|8895|copine III##BC066597|CPNE3|8895|copine III##BC036242|CPNE3|8895|copine III##AB014536|CPNE3|8895|copine III##AF077226|CPNE3|8895|copine III##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2	0.879586	CTCF.p2:-23:0.880
chr9	37409456	37409613	reg1026307.p2	4.743	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-288951	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-289026	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-289048	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	13172	+	BC010007 TSC_hg19_v1_chr9_-_37465267	55726	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	55861	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.01207	
chrX	70922823	70922926	reg1027696.p1	4.743	+	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	-84542	-	NM_052957	-125001	+	TSC_hg19_v1_chrX_+_70765496 AL050366	-157352	+	NM_001145139 NM_001145140	15260	-	NM_001145139 NM_001145140	60265	+	TSC_hg19_v1_chrX_+_71130694 NM_001013627	207904	+	AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_052957|ACRC|93953|acidic repeat containing##AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001013627|NHSL2|340527|NHS-like 2	0.0	
chr1	43123725	43123905	reg1024446.p1	4.742	+	NM_001080850	-123256	+	BC090885 BC101199 BC101200 TSC_hg19_v1_chr1_-_42966086	-157797	-	TSC_hg19_v1_chr1_+_42928956 AL832217	-194867	+	NM_006347 TSC_hg19_v1_chr1_+_43124093 AK310052 AK311979 BC003412 AK309438 AF016371 AF036331 DQ890971 DQ894146 BT019343 CR541899 CR541920	267	+	TSC_hg19_v1_chr1_+_43148064 NM_004559	24245	+	TSC_hg19_v1_chr1_+_43148096 AK309996 AK311708	24281	+	NM_001080850|CCDC30|728621|coiled-coil domain containing 30##BC101199|TMSB4XP1|7115|thymosin beta 4, X-linked pseudogene 1##BC101200|TMSB4XP1|7115|thymosin beta 4, X-linked pseudogene 1##AL832217|CCDC30|728621|coiled-coil domain containing 30##NM_006347|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AK310052|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AK311979|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##BC003412|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AK309438|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AF016371|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AF036331|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##DQ890971|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##DQ894146|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##BT019343|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##CR541899|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##CR541920|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##NM_004559|YBX1|4904|Y box binding protein 1##AK309996|YBX1|4904|Y box binding protein 1##AK311708|YBX1|4904|Y box binding protein 1	0.03619	
chr1	44460585	44460699	reg1029764.p1	4.742	+	TSC_hg19_v1_chr1_+_44457497 CU689784 AY487420	-3116	+	TSC_hg19_v1_chr1_+_44457322 BC033868 NM_152499 BX641142 BC047313	-3356	+	NM_001005417	-14466	+	NM_006934 NM_201649 S70609 S70612 AK315233	22361	-	TSC_hg19_v1_chr1_-_44497033 AK304057 AK298611	36400	-	TSC_hg19_v1_chr1_-_44497141 AK315933 NM_001024845	36497	-	AY487420|CCDC24|149473|coiled-coil domain containing 24##BC033868|CCDC24|149473|coiled-coil domain containing 24##NM_152499|CCDC24|149473|coiled-coil domain containing 24##BX641142|CCDC24|149473|coiled-coil domain containing 24##BC047313|CCDC24|149473|coiled-coil domain containing 24##NM_001005417|B4GALT2|8704|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2##NM_006934|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_201649|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##S70609|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##S70612|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK315233|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK304057|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK298611|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##AK315933|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9##NM_001024845|SLC6A9|6536|solute carrier family 6 (neurotransmitter transporter, glycine), member 9	0.792266	CTCF.p2:3:0.792
chr2	219592713	219592806	reg1029563.p1	4.742	+	TSC_hg19_v1_chr2_+_219575684 D79995	-17052	+	TSC_hg19_v1_chr2_+_219575602 AK302728 NM_014640 AK291770 BC021707 AL833511	-17166	+	TSC_hg19_v1_chr2_+_219536837 NM_001243313 NM_015690 AB033104 BC026158	-55968	+	TSC_hg19_v1_chr2_+_219646471 AK226039 NM_000784 BC017044	53715	+	X59812 TSC_hg19_v1_chr2_+_219646869 AK290418 M62401 BC040430 BC051851 AK310782 CU690866 AY178622	54132	+	AJ249977 BC098102 BC098255 BC098277 BC098306 NM_017431 AK300078 AK300687 AK309865	103759	-	D79995|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##AK302728|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##NM_014640|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##AK291770|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##BC021707|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##AL833511|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##NM_001243313|STK36|27148|serine/threonine kinase 36##NM_015690|STK36|27148|serine/threonine kinase 36##AB033104|STK36|27148|serine/threonine kinase 36##BC026158|STK36|27148|serine/threonine kinase 36##AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##X59812|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AK290418|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##M62401|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC040430|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC051851|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AK310782|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AY178622|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##AJ249977|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098102|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098255|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098277|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098306|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##NM_017431|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300078|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300687|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK309865|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit	0.255709	CTCF.p2:12:0.256
chr3	33818070	33818200	reg1030049.p1	4.742	+	TSC_hg19_v1_chr3_-_33759747 AK091451 AX746992	-58340	-	TSC_hg19_v1_chr3_-_33759706 NM_015097	-58440	-	BC140778 TSC_hg19_v1_chr3_-_33759667	-58531	-	TSC_hg19_v1_chr3_+_33840062 NM_001162429 NM_013374	21928	+	TSC_hg19_v1_chr3_+_33840081 BC068454 AF349951	21948	+	TSC_hg19_v1_chr3_+_33840120 AF151793 BC020066	21972	+	AK091451|CLASP2|23122|cytoplasmic linker associated protein 2##NM_015097|CLASP2|23122|cytoplasmic linker associated protein 2##BC140778|CLASP2|23122|cytoplasmic linker associated protein 2##NM_001162429|PDCD6IP|10015|programmed cell death 6 interacting protein##NM_013374|PDCD6IP|10015|programmed cell death 6 interacting protein##BC068454|PDCD6IP|10015|programmed cell death 6 interacting protein##AF349951|PDCD6IP|10015|programmed cell death 6 interacting protein##AF151793|PDCD6IP|10015|programmed cell death 6 interacting protein##BC020066|PDCD6IP|10015|programmed cell death 6 interacting protein	0.402838	CTCF.p2:19:0.403
chr7	150115091	150115189	reg1028000.p2	4.742	+	BC143767 TSC_hg19_v1_chr7_+_150102384	-12745	+	NM_173680 BC038111	-38713	+	AK226081 AJ245553 NM_014374 BC000363 BC001760 AB529137 CU674178 CU674872 EU446796	-46849	+	BC052099 TSC_hg19_v1_chr7_+_150130817 AK097158 BC109387	15678	+	TSC_hg19_v1_chr7_+_150147882 AK314426	32744	+	TSC_hg19_v1_chr7_+_150147936 NM_175571	32808	+	NM_173680|ZNF775|285971|zinc finger protein 775##BC038111|ZNF775|285971|zinc finger protein 775##AK226081|REPIN1|29803|replication initiator 1##AJ245553|REPIN1|29803|replication initiator 1##NM_014374|REPIN1|29803|replication initiator 1##BC000363|REPIN1|29803|replication initiator 1##BC001760|REPIN1|29803|replication initiator 1##EU446796|REPIN1|29803|replication initiator 1##BC052099|LOC285972|285972|uncharacterized LOC285972##AK097158|LOC285972|285972|uncharacterized LOC285972##BC109387|LOC285972|285972|uncharacterized LOC285972##AK314426|GIMAP8|155038|GTPase, IMAP family member 8##NM_175571|GIMAP8|155038|GTPase, IMAP family member 8	0.984737	CTCF.p2:10:0.985
chr7	43098308	43098488	reg1029319.p2	4.742	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-126429	+	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	-126597	-	BC002900 AB528708 CR450317 CU690460 D00760 BC047697 TSC_hg19_v1_chr7_-_42971774 AK311369 BX641097 AK222976	-126645	-	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	53828	+	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	524296	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	670696	-	AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC002900|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##CR450317|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##D00760|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC047697|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BX641097|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK222976|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44	0.0	
chr8	103639789	103639873	reg1028113.p2	4.742	+	NM_024410 AK315276 BC104456 BC104457	-75970	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-214920	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-388658	-	BC011538 NM_001032282 S81439	26261	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	28101	-	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	236528	-	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1	0.993158	CTCF.p2:4:0.993
chr9	140599979	140600160	reg1026016.p1	4.742	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-86602	+	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	-86626	+	TSC_hg19_v1_chr9_-_140513273 BC011781 AF267857 NM_032937	-86776	-	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	38460	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	172165	+	TSC_hg19_v1_chr9_+_140918045 AB209467	318005	+	BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC011781|C9orf37|85026|chromosome 9 open reading frame 37##AF267857|C9orf37|85026|chromosome 9 open reading frame 37##NM_032937|C9orf37|85026|chromosome 9 open reading frame 37##AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit	0.0	
chr11	65200562	65200674	reg1029768.p1	4.741	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	-7095	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	-8218	+	TSC_hg19_v1_chr11_+_65190274 AK026198	-10340	+	TSC_hg19_v1_chr11_+_65265158 EF177381	64585	+	TSC_hg19_v1_chr11_+_65266515 BC025986 BX538238 FJ209305	65883	+	TSC_hg19_v1_chr11_+_65266869 BC104662	66181	+	AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##EF177381|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BC025986|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BX538238|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)	0.4089	CTCF.p2:8:0.409
chr3	13432940	13433061	reg1031775.p1	4.741	+	AB020713 TSC_hg19_v1_chr3_-_13384784	-48235	-	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	-318402	-	TSC_hg19_v1_chr3_-_13057189 BC071805	-375782	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	28732	-	TSC_hg19_v1_chr3_-_13461832 BC020573 NM_024923	28817	-	NM_024827 TSC_hg19_v1_chr3_+_13521806 AK299021 AK025426 AK025890 BC009676 NM_001136041 AK293223	88812	+	AB020713|NUP210|23225|nucleoporin 210kDa##AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##BC067089|NUP210|23225|nucleoporin 210kDa##BC020573|NUP210|23225|nucleoporin 210kDa##NM_024923|NUP210|23225|nucleoporin 210kDa##NM_024827|HDAC11|79885|histone deacetylase 11##AK299021|HDAC11|79885|histone deacetylase 11##AK025426|HDAC11|79885|histone deacetylase 11##AK025890|HDAC11|79885|histone deacetylase 11##BC009676|HDAC11|79885|histone deacetylase 11##NM_001136041|HDAC11|79885|histone deacetylase 11##AK293223|HDAC11|79885|histone deacetylase 11	0.994954	CTCF.p2:7:0.995
chr6	15622054	15622234	reg1027789.p2	4.741	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-373031	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-373243	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-375732	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	41033	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	41146	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	507158	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.0	
chr6	34528782	34528852	reg1037098.p1	4.741	+	AB031549 BC021299 AF071538 AK301543 NM_001252294 NM_012391	-4721	-	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	-46163	+	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	-94913	+	TSC_hg19_v1_chr6_-_34664565 AK313410 BC002328 BC010184 AK056964 BC075810	135729	-	TSC_hg19_v1_chr6_-_34664631 NM_022758 NM_024294	135809	-	NM_003093	196053	+	AB031549|SPDEF|25803|SAM pointed domain containing ets transcription factor##BC021299|SPDEF|25803|SAM pointed domain containing ets transcription factor##AF071538|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK301543|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_001252294|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_012391|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK313410|C6orf106|64771|chromosome 6 open reading frame 106##BC002328|C6orf106|64771|chromosome 6 open reading frame 106##BC010184|C6orf106|64771|chromosome 6 open reading frame 106##AK056964|C6orf106|64771|chromosome 6 open reading frame 106##BC075810|C6orf106|64771|chromosome 6 open reading frame 106##NM_022758|C6orf106|64771|chromosome 6 open reading frame 106##NM_024294|C6orf106|64771|chromosome 6 open reading frame 106##NM_003093|SNRPC|6631|small nuclear ribonucleoprotein polypeptide C	0.863182	CTCF.p2:1:0.783
chr1	237550019	237550117	reg1027445.p1	4.740	+	NM_001035 X98330 Y08218	-344295	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-591233	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	-591491	+	AK314151 NM_021186	504153	-	TSC_hg19_v1_chr1_+_239550016 AK056349	1999874	+	AF279779 NM_000740	2242304	+	NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3	0.294553	CTCF.p2:11:0.295
chr22	42840500	42840659	reg1024360.p2	4.740	+	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	-12198	-	BC038245 TSC_hg19_v1_chr22_-_42765218	-75377	-	AB527391 NM_005650 NM_181492	-229202	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	75188	-	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	75235	-	BC041802 AK294584 AL450314 NM_014509 AK295223 BC119650 BC119651 BC127635 BC127636 CR456455 AL589866 AL590118 AL590120 CU013005 CU013293	109367	+	CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK294584|SERHL2|253190|serine hydrolase-like 2##AL450314|SERHL2|253190|serine hydrolase-like 2##NM_014509|SERHL2|253190|serine hydrolase-like 2##AK295223|SERHL2|253190|serine hydrolase-like 2##BC119650|SERHL2|253190|serine hydrolase-like 2##BC119651|SERHL2|253190|serine hydrolase-like 2##BC127635|SERHL2|253190|serine hydrolase-like 2##BC127636|SERHL2|253190|serine hydrolase-like 2##CR456455|SERHL2|253190|serine hydrolase-like 2##AL589866|SERHL2|253190|serine hydrolase-like 2##AL590118|SERHL2|253190|serine hydrolase-like 2##AL590120|SERHL2|253190|serine hydrolase-like 2##CU013005|SERHL2|253190|serine hydrolase-like 2##CU013293|SERHL2|253190|serine hydrolase-like 2	0.999377	CTCF.p2:12:0.999
chr6	78636014	78636145	reg1023976.p1	4.740	+	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	-462930	-	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	-1853780	-	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-2177070	+	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	941176	+	BC064611 TSC_hg19_v1_chr6_-_79675737 AK000712	1039673	-	TSC_hg19_v1_chr6_+_79787573 BC036479	1151481	+	BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC064611|PHIP|55023|pleckstrin homology domain interacting protein##AK000712|PHIP|55023|pleckstrin homology domain interacting protein##BC036479|PHIP|55023|pleckstrin homology domain interacting protein	0.023867	
chr1	54953903	54954084	reg1023319.p1	4.739	+	TSC_hg19_v1_chr1_-_54872087 NM_001009955	-81909	-	NM_018070 NM_145716 TSC_hg19_v1_chr1_-_54872066	-81971	-	CU688156 AK289474 BC003605 BC127866 BC066365 TSC_hg19_v1_chr1_-_54871828 AF500116	-82205	-	TSC_hg19_v1_chr1_+_55007956 AK091112	53968	+	NM_015547 NM_147161 TSC_hg19_v1_chr1_+_55013900 BC001517 AK023937 AK223570 AB014607 BC093844 BC093846 AF416921 AF416922	59901	+	CU676764 AY358629 BC015993 BC020874 NM_176782 AK091901 AX747244	135155	-	NM_001009955|SSBP3|23648|single stranded DNA binding protein 3##NM_018070|SSBP3|23648|single stranded DNA binding protein 3##NM_145716|SSBP3|23648|single stranded DNA binding protein 3##AK289474|SSBP3|23648|single stranded DNA binding protein 3##BC003605|SSBP3|23648|single stranded DNA binding protein 3##BC066365|SSBP3|23648|single stranded DNA binding protein 3##AF500116|SSBP3|23648|single stranded DNA binding protein 3##AK091112|ACOT11|26027|acyl-CoA thioesterase 11##NM_015547|ACOT11|26027|acyl-CoA thioesterase 11##NM_147161|ACOT11|26027|acyl-CoA thioesterase 11##BC001517|ACOT11|26027|acyl-CoA thioesterase 11##AK023937|ACOT11|26027|acyl-CoA thioesterase 11##AK223570|ACOT11|26027|acyl-CoA thioesterase 11##AB014607|ACOT11|26027|acyl-CoA thioesterase 11##BC093844|ACOT11|26027|acyl-CoA thioesterase 11##BC093846|ACOT11|26027|acyl-CoA thioesterase 11##AF416921|ACOT11|26027|acyl-CoA thioesterase 11##AF416922|ACOT11|26027|acyl-CoA thioesterase 11##AY358629|FAM151A|338094|family with sequence similarity 151, member A##BC015993|FAM151A|338094|family with sequence similarity 151, member A##BC020874|FAM151A|338094|family with sequence similarity 151, member A##NM_176782|FAM151A|338094|family with sequence similarity 151, member A##AK091901|FAM151A|338094|family with sequence similarity 151, member A	0.0	
chr7	105697642	105697823	reg1000856.p3	4.739	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	-94034	+	TSC_hg19_v1_chr7_+_105517250 AK125261	-180468	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	-180747	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	54949	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	55012	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	55283	-	NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3##AK125261|CDHR3|222256|cadherin-related family member 3##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##X61382|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1	0.0	
chr15	90581571	90581751	reg1030441.p1	4.738	+	TSC_hg19_v1_chr15_+_90544707 BC020301 AK094712 NM_198526	-36972	+	AK093274 AX748027 CU691000 TSC_hg19_v1_chr15_-_90456145 AK000495 BC053602 NM_001199058 NM_182616	-125556	-	NM_005829	-144045	-	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	64001	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	64044	-	TSC_hg19_v1_chr15_-_90645713 AK312627	64066	-	BC020301|ZNF710|374655|zinc finger protein 710##AK094712|ZNF710|374655|zinc finger protein 710##NM_198526|ZNF710|374655|zinc finger protein 710##AK093274|C15orf38|348110|chromosome 15 open reading frame 38##AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##BC053602|C15orf38|348110|chromosome 15 open reading frame 38##NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##NM_182616|C15orf38|348110|chromosome 15 open reading frame 38##NM_005829|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial	0.0	
chr2	64836497	64836606	reg1026609.p1	4.738	+	TSC_hg19_v1_chr2_+_64751580 AL833962	-84949	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	-85067	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	-154903	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	44298	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	44496	-	TSC_hg19_v1_chr2_-_65090764 AK097952	254190	-	AL833962|AFTPH|54812|aftiphilin##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2	0.029486	
chr4	154354516	154354697	reg1002037.p2	4.738	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-88731	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-88819	+	TSC_hg19_v1_chr4_+_154178530 BC025417	-176067	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	32886	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	250792	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	250824	+	AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC025417|TRIM2|23321|tripartite motif containing 2##NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2	0.0	
chr9	6585416	6585538	reg1010820.p2	4.738	+	TSC_hg19_v1_chr9_+_6413338 AF274049 AB071698 EU176286 EU176602 AB385208	-172072	+	TSC_hg19_v1_chr9_+_6413200 AK308433	-172280	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	-172333	+	BC111993 BC111995 M63635 D90239 M64590 AK314156 NM_000170	60150	-	AK310439 NM_001146696	135385	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	172190	+	AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK308433|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC111993|GLDC|2731|glycine dehydrogenase (decarboxylating)##BC111995|GLDC|2731|glycine dehydrogenase (decarboxylating)##M63635|GLDC|2731|glycine dehydrogenase (decarboxylating)##D90239|GLDC|2731|glycine dehydrogenase (decarboxylating)##M64590|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK314156|GLDC|2731|glycine dehydrogenase (decarboxylating)##NM_000170|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C	0.0	
chr9	95824426	95824532	reg1029484.p2	4.738	+	TSC_hg19_v1_chr9_+_95821007 CU677063 DQ894024 EU176188 AY358190	-3455	+	TSC_hg19_v1_chr9_+_95820982 BC014601 NM_145006	-3503	+	NM_033086 BX647829 BC111054 AY211386	-87730	+	NM_032310 TSC_hg19_v1_chr9_+_95858498 AK057716 AK091611 AX747094 BC042201 BC038856 BC004500	34001	+	BC091476 TSC_hg19_v1_chr9_+_95858566	34100	+	BT007164 CU690562 U72661 U91512 BC019336 BC004440 BC000298 TSC_hg19_v1_chr9_-_95896534 BC048212 NM_004148	72063	-	DQ894024|SUSD3|203328|sushi domain containing 3##EU176188|SUSD3|203328|sushi domain containing 3##AY358190|SUSD3|203328|sushi domain containing 3##BC014601|SUSD3|203328|sushi domain containing 3##NM_145006|SUSD3|203328|sushi domain containing 3##NM_033086|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BX647829|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BC111054|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AY211386|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##NM_032310|C9orf89|84270|chromosome 9 open reading frame 89##AK057716|C9orf89|84270|chromosome 9 open reading frame 89##AK091611|C9orf89|84270|chromosome 9 open reading frame 89##BC042201|C9orf89|84270|chromosome 9 open reading frame 89##BC038856|C9orf89|84270|chromosome 9 open reading frame 89##BC004500|C9orf89|84270|chromosome 9 open reading frame 89##BC091476|C9orf89|84270|chromosome 9 open reading frame 89##BT007164|NINJ1|4814|ninjurin 1##U72661|NINJ1|4814|ninjurin 1##U91512|NINJ1|4814|ninjurin 1##BC019336|NINJ1|4814|ninjurin 1##BC004440|NINJ1|4814|ninjurin 1##BC000298|NINJ1|4814|ninjurin 1##BC048212|NINJ1|4814|ninjurin 1##NM_004148|NINJ1|4814|ninjurin 1	0.0	
chr11	22561636	22561791	reg1036293.p1	4.737	+	AB032435 NM_020346	-202047	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	-347066	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	-1870521	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	85648	-	TSC_hg19_v1_chr11_+_22688156 NM_001143830 AK313734	126445	+	BC013326 BC040470 NM_177553	127940	+	AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F##NM_001143830|GAS2|2620|growth arrest-specific 2##AK313734|GAS2|2620|growth arrest-specific 2##BC013326|GAS2|2620|growth arrest-specific 2##BC040470|GAS2|2620|growth arrest-specific 2##NM_177553|GAS2|2620|growth arrest-specific 2	0.773188	CTCF.p2:9:0.773
chr12	53845568	53845726	reg1020870.p2	4.737	+	NM_001005354 NM_018457 BC001464 TSC_hg19_v1_chr12_+_53835537 AF217517 AK296930 BC014257 BC016064 BC066943 AK074398 BX640962 BC062322 BC021019	-10150	+	TSC_hg19_v1_chr12_+_53818869 CR627318	-26781	+	NM_001164690 NM_001164691 NM_020547 AK313593 AF172932 BC126316 BC136356 AY714878 HQ258327	-27969	+	TSC_hg19_v1_chr12_+_53845885 AB188306 NM_001098620 NM_001128911 NM_001128912 NM_001128913 NM_001128914 NM_005016 NM_031989	238	+	TSC_hg19_v1_chr12_+_53845888 BC071942	247	+	TSC_hg19_v1_chr12_+_53845938 BC035420	281	+	NM_001005354|PRR13|54458|proline rich 13##NM_018457|PRR13|54458|proline rich 13##BC001464|PRR13|54458|proline rich 13##AF217517|PRR13|54458|proline rich 13##BC014257|PRR13|54458|proline rich 13##BC016064|PRR13|54458|proline rich 13##BC066943|PRR13|54458|proline rich 13##AK074398|PRR13|54458|proline rich 13##BX640962|PRR13|54458|proline rich 13##BC062322|PRR13|54458|proline rich 13##BC021019|PRR13|54458|proline rich 13##CR627318|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_001164690|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_001164691|AMHR2|269|anti-Mullerian hormone receptor, type II##NM_020547|AMHR2|269|anti-Mullerian hormone receptor, type II##AK313593|AMHR2|269|anti-Mullerian hormone receptor, type II##AF172932|AMHR2|269|anti-Mullerian hormone receptor, type II##BC126316|AMHR2|269|anti-Mullerian hormone receptor, type II##BC136356|AMHR2|269|anti-Mullerian hormone receptor, type II##AY714878|AMHR2|269|anti-Mullerian hormone receptor, type II##HQ258327|AMHR2|269|anti-Mullerian hormone receptor, type II##AB188306|PCBP2|5094|poly(rC) binding protein 2##NM_001098620|PCBP2|5094|poly(rC) binding protein 2##NM_001128911|PCBP2|5094|poly(rC) binding protein 2##NM_001128912|PCBP2|5094|poly(rC) binding protein 2##NM_001128913|PCBP2|5094|poly(rC) binding protein 2##NM_001128914|PCBP2|5094|poly(rC) binding protein 2##NM_005016|PCBP2|5094|poly(rC) binding protein 2##NM_031989|PCBP2|5094|poly(rC) binding protein 2##BC071942|PCBP2|5094|poly(rC) binding protein 2##BC035420|PCBP2|5094|poly(rC) binding protein 2	0.709099	CTCF.p2:-5:0.709
chr1	6265384	6265485	reg1026931.p2	4.737	+	TSC_hg19_v1_chr1_-_6259655 CR456873 BC046108 BC058887 AK097075 AK311749 D17652 BC066314 BC035566 NM_000983	-5781	-	AK127046 AB527126 AF425231 NM_015557 TSC_hg19_v1_chr1_-_6240331	-25227	-	AK315858 NM_001199863	-159261	+	BC119780 TSC_hg19_v1_chr1_+_6266175 NM_207396	730	+	AK056658 TSC_hg19_v1_chr1_+_6268938 AK294223 BC128237	3563	+	TSC_hg19_v1_chr1_-_6295985 CR541671 CR541711 AB590586	30543	-	CR456873|RPL22|6146|ribosomal protein L22##BC058887|RPL22|6146|ribosomal protein L22##AK097075|RPL22|6146|ribosomal protein L22##AK311749|RPL22|6146|ribosomal protein L22##D17652|RPL22|6146|ribosomal protein L22##BC066314|RPL22|6146|ribosomal protein L22##BC035566|RPL22|6146|ribosomal protein L22##NM_000983|RPL22|6146|ribosomal protein L22##AK127046|CHD5|26038|chromodomain helicase DNA binding protein 5##AF425231|CHD5|26038|chromodomain helicase DNA binding protein 5##NM_015557|CHD5|26038|chromodomain helicase DNA binding protein 5##AK315858|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199863|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##BC119780|RNF207|388591|ring finger protein 207##NM_207396|RNF207|388591|ring finger protein 207##AK056658|RNF207|388591|ring finger protein 207##AK294223|RNF207|388591|ring finger protein 207##BC128237|RNF207|388591|ring finger protein 207##CR541671|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##CR541711|ICMT|23463|isoprenylcysteine carboxyl methyltransferase	0.637488	CTCF.p2:6:0.637
chr2	98578036	98578147	reg1024610.p1	4.737	+	AK025852 TSC_hg19_v1_chr2_-_98408976	-169169	-	AB083211 NM_207519	-227223	+	L05148 NM_001079 AK303341 AK310637 AK310628 BC053878	-248049	+	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	34095	-	TSC_hg19_v1_chr2_-_98612395 AK098792	34312	-	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	125555	+	AK025852|TMEM131|23505|transmembrane protein 131##AB083211|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_207519|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##L05148|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_001079|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK303341|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310637|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310628|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##BC053878|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##AK098792|TMEM131|23505|transmembrane protein 131##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B	0.0	
chr4	113444257	113444437	reg1001600.p1	4.737	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	-7015	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	-225820	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	-237346	-	TSC_hg19_v1_chr4_-_113558057 BC044799 BC028584 AK002193	113699	-	NM_016648	113772	+	TSC_hg19_v1_chr4_-_113558120 AK302613 AK299831 NM_018392	113788	-	BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC044799|C4orf21|55345|chromosome 4 open reading frame 21##BC028584|C4orf21|55345|chromosome 4 open reading frame 21##AK002193|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7##AK302613|C4orf21|55345|chromosome 4 open reading frame 21##AK299831|C4orf21|55345|chromosome 4 open reading frame 21##NM_018392|C4orf21|55345|chromosome 4 open reading frame 21	0.733114	CTCF.p2:5:0.733
chr7	134371738	134371851	reg1030072.p1	4.737	+	NM_001724 NM_199186 TSC_hg19_v1_chr7_+_134331586 BC017050 AK315439 AK097778 X04327	-40209	+	NM_001080538	-137946	+	AF524864 NM_020299 BC008837	-159424	+	TSC_hg19_v1_chr7_+_134464170 NM_004342 NM_033138 NM_033157 AK289686	92372	+	TSC_hg19_v1_chr7_+_134464387 AK298524 AK304729 AF247820 M83216	92595	+	TSC_hg19_v1_chr7_+_134464419 BC040354	92628	+	NM_001724|BPGM|669|2,3-bisphosphoglycerate mutase##NM_199186|BPGM|669|2,3-bisphosphoglycerate mutase##BC017050|BPGM|669|2,3-bisphosphoglycerate mutase##AK315439|BPGM|669|2,3-bisphosphoglycerate mutase##AK097778|BPGM|669|2,3-bisphosphoglycerate mutase##X04327|BPGM|669|2,3-bisphosphoglycerate mutase##NM_001080538|AKR1B15|441282|aldo-keto reductase family 1, member B15##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_004342|CALD1|800|caldesmon 1##NM_033138|CALD1|800|caldesmon 1##NM_033157|CALD1|800|caldesmon 1##AK289686|CALD1|800|caldesmon 1##AK298524|CALD1|800|caldesmon 1##AK304729|CALD1|800|caldesmon 1##AF247820|CALD1|800|caldesmon 1##M83216|CALD1|800|caldesmon 1##BC040354|CALD1|800|caldesmon 1	0.113883	
chr11	47350091	47350194	reg1030479.p2	4.736	+	TSC_hg19_v1_chr11_+_47291683 NM_001135943 NM_130475 NM_130476 BC040484 AB002356 U44953	-58424	+	TSC_hg19_v1_chr11_+_47291234 NM_001135944 NM_003682 NM_130471 NM_130472 NM_130473 NM_130474 AF440100 AF440101 AF440102 AF440103 AF440434 AK292442	-58929	+	TSC_hg19_v1_chr11_+_47290926 NM_130470 U77352	-59202	+	BC136543 BC136546 X84075 BC142685 BC151211 AK291569 AK297843 EF560722 EU747718 EU747719 NM_000256 TSC_hg19_v1_chr11_-_47374254	24095	-	AB464244 TSC_hg19_v1_chr11_-_47399956	49800	-	TSC_hg19_v1_chr11_-_47400039 AK310065	49873	-	NM_001135943|MADD|8567|MAP-kinase activating death domain##NM_130475|MADD|8567|MAP-kinase activating death domain##NM_130476|MADD|8567|MAP-kinase activating death domain##BC040484|MADD|8567|MAP-kinase activating death domain##AB002356|MADD|8567|MAP-kinase activating death domain##U44953|MADD|8567|MAP-kinase activating death domain##NM_001135944|MADD|8567|MAP-kinase activating death domain##NM_003682|MADD|8567|MAP-kinase activating death domain##NM_130471|MADD|8567|MAP-kinase activating death domain##NM_130472|MADD|8567|MAP-kinase activating death domain##NM_130473|MADD|8567|MAP-kinase activating death domain##NM_130474|MADD|8567|MAP-kinase activating death domain##AF440100|MADD|8567|MAP-kinase activating death domain##AF440101|MADD|8567|MAP-kinase activating death domain##AF440102|MADD|8567|MAP-kinase activating death domain##AF440103|MADD|8567|MAP-kinase activating death domain##AF440434|MADD|8567|MAP-kinase activating death domain##AK292442|MADD|8567|MAP-kinase activating death domain##NM_130470|MADD|8567|MAP-kinase activating death domain##U77352|MADD|8567|MAP-kinase activating death domain##BC136543|MYBPC3|4607|myosin binding protein C, cardiac##BC136546|MYBPC3|4607|myosin binding protein C, cardiac##X84075|MYBPC3|4607|myosin binding protein C, cardiac##BC142685|MYBPC3|4607|myosin binding protein C, cardiac##BC151211|MYBPC3|4607|myosin binding protein C, cardiac##AK291569|MYBPC3|4607|myosin binding protein C, cardiac##AK297843|MYBPC3|4607|myosin binding protein C, cardiac##EF560722|MYBPC3|4607|myosin binding protein C, cardiac##EU747718|MYBPC3|4607|myosin binding protein C, cardiac##EU747719|MYBPC3|4607|myosin binding protein C, cardiac##NM_000256|MYBPC3|4607|myosin binding protein C, cardiac##AK310065|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1	0.0	
chr12	12990036	12990172	reg1028472.p1	4.736	+	AK310501 TSC_hg19_v1_chr12_+_12966285 AK302536 AL136666 NM_016355 NM_201224 AL833469 AK054574 BC068009 AB462951 AJ276704 AM393320 AM393714 AK225144 AF190165 BC009379 AK222940 AF078843 EF036507	-23814	+	BC126433 BC126435 NM_030817 TSC_hg19_v1_chr12_+_12938594 AK057867 AK225176 AK314392 AL136783	-51527	+	TSC_hg19_v1_chr12_+_12878853 NM_001130415 AK127712 BC042478 AM393383	-111248	+	NM_003979	53851	+	AK001761 TSC_hg19_v1_chr12_+_13044469	54307	+	TSC_hg19_v1_chr12_+_13044495 AF506289 AF095448 BC003665 AK291171	54421	+	AK310501|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK302536|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AL136666|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_016355|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_201224|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AL833469|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK054574|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC068009|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AJ276704|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AM393320|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AM393714|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK225144|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AF190165|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC009379|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK222940|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AF078843|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##EF036507|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC126433|APOLD1|81575|apolipoprotein L domain containing 1##BC126435|APOLD1|81575|apolipoprotein L domain containing 1##NM_030817|APOLD1|81575|apolipoprotein L domain containing 1##AK225176|APOLD1|81575|apolipoprotein L domain containing 1##AK314392|APOLD1|81575|apolipoprotein L domain containing 1##AL136783|APOLD1|81575|apolipoprotein L domain containing 1##NM_001130415|APOLD1|81575|apolipoprotein L domain containing 1##BC042478|APOLD1|81575|apolipoprotein L domain containing 1##AM393383|APOLD1|81575|apolipoprotein L domain containing 1##NM_003979|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AK001761|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AF506289|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AF095448|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##BC003665|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AK291171|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A	0.997813	CTCF.p2:6:0.998
chr15	22988486	22988585	reg1030533.p1	4.736	+	AK127094 AY763579 NM_001033028	-32781	+	TSC_hg19_v1_chr15_+_22892723 D38549 BC005097	-95798	+	TSC_hg19_v1_chr15_+_22892718 AY763578	-95819	+	TSC_hg19_v1_chr15_-_23034343 BC011775 AY732242	45799	-	TSC_hg19_v1_chr15_-_23034365 AK300843	45832	-	TSC_hg19_v1_chr15_-_23034411 AK096305 AK313584 NM_001008860 NM_001008892 NM_001008894 NM_001184888 NM_001184889 NM_030922	45881	-	AK127094|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1##AY763579|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1##NM_001033028|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1##D38549|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1##BC005097|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1##AY763578|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1##BC011775|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AY732242|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AK300843|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AK096305|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AK313584|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001008860|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001008892|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001008894|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001184888|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001184889|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_030922|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2	0.167646	
chr15	81270004	81270108	reg1028272.p1	4.736	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	-198335	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	-282047	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	-282394	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	12144	-	TSC_hg19_v1_chr15_+_81293344 NM_022566	23288	+	AK302120 BC062471 NM_173528 AK307565	156571	+	AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##NM_022566|MESDC1|59274|mesoderm development candidate 1##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26	0.110041	
chr16	33293846	33294027	reg1023048.p1	4.736	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-31803	+	AL133588 NM_016212	-32422	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-88338	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	13361336	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	13361370	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	13429126	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.0	
chr2	8628361	8628527	reg1028554.p1	4.736	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1570857	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1610581	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1621741	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	193759	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	349275	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	515377	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr8	135576082	135576263	reg1030534.p3	4.736	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-992075	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-1266675	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1372842	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	132622	-	TSC_hg19_v1_chr8_-_135725053 AB463359	148907	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	149102	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr11	108459115	108459278	reg1029385.p2	4.735	+	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	-90001	-	BC059411 BC029536 AK303096 NM_152587	-120954	-	TSC_hg19_v1_chr11_+_108093793 AB209133 U33841	-365399	+	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	5208	-	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	76618	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	833647	+	AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC029536|C11orf65|160140|chromosome 11 open reading frame 65##AK303096|C11orf65|160140|chromosome 11 open reading frame 65##NM_152587|C11orf65|160140|chromosome 11 open reading frame 65##AB209133|ATM|472|ataxia telangiectasia mutated##U33841|ATM|472|ataxia telangiectasia mutated##BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87	0.03904	
chr12	69224137	69224243	reg1028419.p2	4.735	+	EU076746 EU076747 EU076748 EU076749 TSC_hg19_v1_chr12_+_69202803	-21389	+	TSC_hg19_v1_chr12_+_69201980 AK290341	-22198	+	TSC_hg19_v1_chr12_+_69201958 BC009893 BC013887 BC067077 M92424 NM_002392 Z12020	-22279	+	TSC_hg19_v1_chr12_-_69326952 AF368463 AK313180 BC022276 NM_001005502 NM_198320	102772	-	J04970 NM_001874 AK127859	132829	-	NM_007007 TSC_hg19_v1_chr12_+_69633348 AK223568 AK299928	409143	+	EU076746|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076747|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076748|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##EU076749|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##AK290341|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##M92424|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##NM_002392|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##Z12020|MDM2|4193|Mdm2 p53 binding protein homolog (mouse)##AF368463|CPM|1368|carboxypeptidase M##AK313180|CPM|1368|carboxypeptidase M##BC022276|CPM|1368|carboxypeptidase M##NM_001005502|CPM|1368|carboxypeptidase M##NM_198320|CPM|1368|carboxypeptidase M##J04970|CPM|1368|carboxypeptidase M##NM_001874|CPM|1368|carboxypeptidase M##AK127859|CPM|1368|carboxypeptidase M##NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa	0.472253	CTCF.p2:-1:0.440
chr13	98685696	98685795	reg1028764.p1	4.734	+	TSC_hg19_v1_chr13_+_98628928 BX648222 AK303494 AK225286 BC001497 BC019309 DQ893033 EU176755 U72761	-56913	+	NM_002271 BC045640	-79808	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	-599043	+	TSC_hg19_v1_chr13_+_98795412 NM_001001715 NM_005766	109676	+	TSC_hg19_v1_chr13_+_98795470 BC041595	109741	+	TSC_hg19_v1_chr13_+_98795717 AB008430 BC065020	109973	+	BX648222|IPO5|3843|importin 5##AK303494|IPO5|3843|importin 5##AK225286|IPO5|3843|importin 5##BC001497|IPO5|3843|importin 5##BC019309|IPO5|3843|importin 5##DQ893033|IPO5|3843|importin 5##EU176755|IPO5|3843|importin 5##U72761|IPO5|3843|importin 5##NM_002271|IPO5|3843|importin 5##BC045640|IPO5|3843|importin 5##AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC041595|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	0.023999	
chr17	11890391	11890509	reg1027424.p2	4.734	+	NM_004662 X99947	-104230	+	AJ404468 NM_001372 AF257737 AK055990 AK310137	-388683	+	AK094349 TSC_hg19_v1_chr17_+_11465221 BC105704 BC105705 BC105707 BC105706	-425254	+	AK092656 AX747657 NM_144680 TSC_hg19_v1_chr17_-_11900782 AY491053 AK127908	10303	-	TSC_hg19_v1_chr17_+_11924150 BC036032 NM_003010 BC060764 AK131544 AK313053 U17743 AK294923 L36870 BC050386 AB590846 BT019676 CR536564	33731	+	NM_001146312 NM_153604 TSC_hg19_v1_chr17_+_12569210 AY764180	678759	+	NM_004662|DNAH9|1770|dynein, axonemal, heavy chain 9##X99947|DNAH9|1770|dynein, axonemal, heavy chain 9##AJ404468|DNAH9|1770|dynein, axonemal, heavy chain 9##NM_001372|DNAH9|1770|dynein, axonemal, heavy chain 9##AF257737|DNAH9|1770|dynein, axonemal, heavy chain 9##AK055990|DNAH9|1770|dynein, axonemal, heavy chain 9##AK310137|DNAH9|1770|dynein, axonemal, heavy chain 9##AK094349|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105704|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105705|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105707|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105706|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##AK092656|ZNF18|7566|zinc finger protein 18##NM_144680|ZNF18|7566|zinc finger protein 18##AY491053|ZNF18|7566|zinc finger protein 18##AK127908|ZNF18|7566|zinc finger protein 18##BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4##NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4##U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4##L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4##CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4##NM_001146312|MYOCD|93649|myocardin##NM_153604|MYOCD|93649|myocardin##AY764180|MYOCD|93649|myocardin	0.746493	CTCF.p2:25:0.746
chr22	37373517	37373647	reg1007328.p1	4.734	+	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	-63924	+	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	-116474	+	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	-158063	-	BC042635 CR456416 NM_001163857 NM_178552	30275	-	D87292 TSC_hg19_v1_chr22_-_37415489 AK091874 BC010148 AK000862 AK223521 AK301300 NM_003312	41899	-	NM_001013436 NM_001130517 NM_021126 TSC_hg19_v1_chr22_+_37415789	42163	+	BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##BC042635|C22orf33|339669|chromosome 22 open reading frame 33##CR456416|C22orf33|339669|chromosome 22 open reading frame 33##NM_001163857|C22orf33|339669|chromosome 22 open reading frame 33##NM_178552|C22orf33|339669|chromosome 22 open reading frame 33##D87292|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK091874|TST|7263|thiosulfate sulfurtransferase (rhodanese)##BC010148|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK000862|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK223521|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK301300|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_003312|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_001013436|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001130517|MPST|4357|mercaptopyruvate sulfurtransferase##NM_021126|MPST|4357|mercaptopyruvate sulfurtransferase	0.0186	
chr9	132222795	132222939	reg1027705.p1	4.734	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-139572	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-282327	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-282360	-	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	28487	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	28574	+	BC112353 AK093122 AX747938 NM_199350	160170	-	AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50	0.140821	
chr11	64781358	64781538	reg1009408.p2	4.733	+	AB463431 AK096702 HM134154 NM_138456	-16996	-	BC106951 BC106952 NM_001037225	-53840	-	BC093960 BC093962 BC101523 AF260739 NM_130769	-78102	-	NM_001199745 NM_001667 AK223502 TSC_hg19_v1_chr11_+_64781642 BC002530 AK096447 L13687 EU832671 EU832750 AB527923 AK294580 AF493888 BT006674	183	+	NM_013306 NM_147777 TSC_hg19_v1_chr11_+_64794948 BC012767 BC014520 AK315642 AK315034 AF001435 BC009897 AF175267 AB527759 CU679523 AF175268 BT006631 AB209439	13497	+	NM_013299 TSC_hg19_v1_chr11_+_64808377	26933	+	AK096702|BATF2|116071|basic leucine zipper transcription factor, ATF-like 2##HM134154|BATF2|116071|basic leucine zipper transcription factor, ATF-like 2##NM_138456|BATF2|116071|basic leucine zipper transcription factor, ATF-like 2##BC106951|C11orf85|283129|chromosome 11 open reading frame 85##BC106952|C11orf85|283129|chromosome 11 open reading frame 85##NM_001037225|C11orf85|283129|chromosome 11 open reading frame 85##BC093960|GPHA2|170589|glycoprotein hormone alpha 2##BC093962|GPHA2|170589|glycoprotein hormone alpha 2##BC101523|GPHA2|170589|glycoprotein hormone alpha 2##AF260739|GPHA2|170589|glycoprotein hormone alpha 2##NM_130769|GPHA2|170589|glycoprotein hormone alpha 2##NM_001199745|ARL2|402|ADP-ribosylation factor-like 2##NM_001667|ARL2|402|ADP-ribosylation factor-like 2##AK223502|ARL2|402|ADP-ribosylation factor-like 2##BC002530|ARL2|402|ADP-ribosylation factor-like 2##AK096447|ARL2-SNX15|100528018|ARL2-SNX15 readthrough##L13687|ARL2|402|ADP-ribosylation factor-like 2##EU832671|ARL2|402|ADP-ribosylation factor-like 2##EU832750|ARL2|402|ADP-ribosylation factor-like 2##AK294580|ARL2|402|ADP-ribosylation factor-like 2##AF493888|ARL2|402|ADP-ribosylation factor-like 2##BT006674|ARL2|402|ADP-ribosylation factor-like 2##NM_013306|SNX15|29907|sorting nexin 15##NM_147777|SNX15|29907|sorting nexin 15##BC012767|SNX15|29907|sorting nexin 15##BC014520|SNX15|29907|sorting nexin 15##AK315642|SNX15|29907|sorting nexin 15##AK315034|SNX15|29907|sorting nexin 15##AF001435|SNX15|29907|sorting nexin 15##BC009897|SNX15|29907|sorting nexin 15##AF175267|SNX15|29907|sorting nexin 15##AF175268|SNX15|29907|sorting nexin 15##BT006631|SNX15|29907|sorting nexin 15##AB209439|SNX15|29907|sorting nexin 15##NM_013299|SAC3D1|29901|SAC3 domain containing 1	0.0	
chr12	760236	760393	reg1030806.p1	4.733	+	TSC_hg19_v1_chr12_-_752800 AK298043	-7495	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-8136	+	AB089940 NM_173593	-190772	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	12401	-	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	101842	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	102442	+	BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AB089940|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_173593|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr13	99521781	99521864	reg1026020.p1	4.733	+	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	-116917	-	TSC_hg19_v1_chr13_-_99229363 BC035578 BC065378 NM_001032296	-292511	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	-292700	-	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	108468	-	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	216869	-	AK290342 NM_001144072	330856	+	BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC035578|STK24|8428|serine/threonine kinase 24##BC065378|STK24|8428|serine/threonine kinase 24##NM_001032296|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24##AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9##AK290342|UBAC2|337867|UBA domain containing 2##NM_001144072|UBAC2|337867|UBA domain containing 2	0.873953	CTCF.p2:5:0.874
chr14	107172886	107172989	reg1025471.p1	4.733	+	M87789 L29121 BC069016 L08086 AK123800 BC025314 BC026038 AK131045 AK126133 AK130642 TSC_hg19_v1_chr14_-_107170426 AK097360 AK097364 AK128394 AK307688 BC016381 AK096985 AK097305 AK097356 AK123070 AK129512 AK129622 AK129777 AK130786 AK131065 BC070333 AK097361 AK097363 AK058027 AK129809	-2522	-	AY179836 AY179838 AY179841 AY179844 AY179846 AY179847 AY179848 AY179850 AY179854 AY179855 AY179856 AY179858 AY179860 AY003797 DQ454801 EF583677 EU099154 EU099192 AY003810 DQ454853 AY003779 DQ454620 DQ523910 GU552683 AY003802 AY003865 DQ454802 DQ454808 DQ454937 GU552691 GU552774 HM773974 FJ873961 EF441761 DQ454821 AY996332 FJ840044 FJ840053 FJ840143 FJ840193 FJ840194 FJ840196 FJ840204 FJ840239 FJ873866 FJ873869 FJ873895 FJ873936 FJ874043 GQ232929 HM116184 EF583683 EF175392 EU099153 GQ232967 GU358675 EF583681 EU099116 GU358674 JF810254 EF091907 EF175405 EU667599 EF091906 EF091908 EF091909 EF091910 EF175388 EF175390 EF175395 EF175406 EF175412 EF175417 EF175418 EF175420 EF175428 EF407848 EF441755 EU099106 EU350411 EU350412 EU433866 EU433872 EU433873 EU433879 EU667594 EU667595 EU667596 EU667597 EU667598 EU814958 EU814959 EU814960 EU814963 EU814966 FJ694873 FJ694874 GQ232838 GQ232965 GU358670 GU358676 GU358678 GU358682 JF810255 JF810274 AF103216 EF175425 EF583662 EF583663 EF583664 EF583665 EF583667 EF583673 EF583674 EF583675 EF583682 EU350410 M35478 EF407834 EF566907 EF407828 EF407830 EF583660 DQ100847 AY998726 AF209884 AJ007325 EF473862 EU099204 U86786 U86795 U86797 AF308545 AF308549 AF308553 AF308554 AF308559 AF308560 AF308561 EU090245 GQ903485 GQ903489 GQ903492 EU099120 GQ903503 AJ239384 EU099100 EU099208 Z80841 AF103052 AF103307 EU099086 EU099105 EU099142 EU099250 EU099176 EU099293 HM774304 AY515008 EU099141 EU099212 JN110763 JN110845 JN110914 JN111163 L04334 L04335 L04344 FJ385405 FJ385410 FJ385424 FJ385430 FJ385431 HM774065 HM774083 HM774091 HM774102 HM774365 HM774646 HM774653 HM774656 HM774681 HM774757 HM774769 HM774771 HM774786 HM774863 HM774965 HM775047 AF103339 AY515006 DQ523992 EU099090 EU099092 EU099115 EU099162 EU099179 EU099210 EU099218 EU099282 DQ097895 EF624069 EF624074 EF624075 EF624077 EF624128 EF624129 EF624130 EF624131 EF624138 EF624140 EF624141 EF624143 EF624174 EF624175 EF624176 EF624177 EF624179 EF624180 EF624182 EF624183 EF624184 EF624185 EF624186 EF624187 EF624188 EF624189 EF624190 EF624191 EF624192 EF624193 EU099060 EU099066 EU099128 EU099129 EU099145 EU099158 EU099160 EU099161 EU099165 EU099177 EU099178 EU099180 EU099247 EU146320 EU146330 EU146331 EU146336 EU146348 EU146349 EU146350 EU146351 EU146352 EU146353 EU146354 EU146355 EU146356 EU146357 EU146359 EU146383 EU146385 EU146386 M98324 AY393263 AY393515 DQ524120 EU090241 EU099081 EU099095 EU099099 EU099103 EU099111 EU099121 EU099135 EU099136 EU099164 EU099170 EU099174 EU099189 EU099205 EU099207 EU099209 EU099220 AF306353 AJ132852 AM259138 L12098 AF035025 AY392856 AY392858 AY393000 AY393010 AY393106 AY393123 AY393128 AY393133 AY393135 AY393137 AY393138 AY393233 AY393338 AY393342 AY393350 AY393373 AY393495 AY393496 AY393501 AY393503 AY393504 AY393508 AY393513 AY393514 AY393516 AY393517 AY393518 AY393519 AY393520 AY393522 AY393523 AY393525 AY393528 AY393532 AY393535 AY393538 AY393539 AY393540 AY393541 AY393542 AY393543 AY393544 AY393545 AY393546 AY393604 AY393611 AY393682 DQ100913 EU099069 EU099072 EU099083 EU099117 EU099138 EU099167 EU099168 EU099171 EU099175 EU099188 EU099198 EU099201 EU099202 EU099211 EU099219 EU099236 HM994945 AY574947 AY093586 AY093587 DQ100805 DQ100924 JN158773 AY093585 AF035785 AF098366 AY781822 DQ100688 DQ523989 HM995306 U00502 DQ100709 DQ100908 DQ523957 DQ524013 DQ524031 DQ524041 DQ524127 HM994992 HM994994 HM994997 HM994998 HM995013 HM995114 HM995174 HM995178 HM995180 HM995227 HM995241 HM995248 HM995283 HM995304 HM995307 HM995375 HM995447 HM995450 HM995512 HM995517 HM995520 HM995558 HM995678 HM995679 HM995680 HM995681 HM995682 HM995683 HM995684 HM995685 HM995744 HM996065 HM996269 HM996387 AF004321 AB063837 AB063906 AB063914 AB067012 AB067013 AB067018 AB067022 AB067235 AB363092 AF099200 AF174076 AY781868 AY866799 AY941859 DQ065663 DQ065677 DQ065701 DQ840709 DQ926327 EF178030 FJ195540 FJ385306 FJ385381 GQ856069 GQ903493 GQ903497 GQ903502 GQ903514 Z92894 AB027437 AB063666 AB063701 AB063715 AB063720 AB063763 AB063768 AB063778 AB063780 AB063785 AB063831 AB063902 AB063903 AB063921 AB066830 AB066835 AB066837 AB066840 AB066841 AB066842 AB066843 AB066928 AB066936 AB066939 AB066942 AB066944 AB066948 AB066949 AB066953 AB067158 AB067170 AB067305 AB067309 AB067333 AB067383 AB363078 AB363086 AB363094 AB363097 AB373608 AF021950 AF021951 AF021952 AF021970 AF021992 AF035784 AF062098 AF062127 AF062189 AF062216 AF062283 AF115114 AF115115 AF115116 AF115118 AF115119 AF174042 AF174065 AF174069 AF174073 AF174096 AF174109 AF174126 AF193848 AF217789 AF408721 AF460964 AF460965 AJ239346 AJ239357 AJ239365 AJ239372 AJ239376 AJ389170 AJ389172 AJ389179 AJ389181 AJ413995 AJ414000 AJ414001 AJ414002 AJ414004 AJ414008 AJ414009 AJ414010 AJ414015 AJ414017 AJ414020 AJ414021 AJ414023 AJ414027 AJ416562 AJ555258 AJ555262 AJ555275 AM040567 AY033246 AY055485 AY059634 AY281328 AY281329 AY466503 AY485361 AY553640 AY557623 AY557624 AY557625 AY557626 AY557627 AY561708 AY577304 AY781812 AY927666 AY941846 AY941940 D16837 DQ100681 DQ100723 DQ100733 DQ100777 DQ100808 DQ100811 DQ100820 DQ100839 DQ100902 DQ100906 DQ100912 DQ100952 DQ212523 DQ490739 DQ926531 EF555585 EF624068 EF624070 EF624071 EF624072 EF624073 EF624078 EF624079 EF624132 EF624136 EF624178 EF624181 EF624194 EF624195 EU202446 EU202448 EU835547 EU835554 FJ039781 FJ039784 FJ385379 GQ903484 GQ903486 GQ903487 GQ903490 GQ903491 GQ903495 GQ903496 GQ903498 GQ903500 GQ903501 GQ903504 GQ903507 GQ903509 GQ903511 GU570264 GU570271 GU570274 HM152493 HM152496 HM152502 HM152504 HM152527 HQ378401 HQ392874 HQ689778 HQ689781 JN158782 JN159449 JN159454 L14454 L23519 S73955 U00518 U00550 U00583 U71105 U85240 U89903 X64237 X67903 Z18841 Z34906 Z34908 Z34957 Z34959 Z34960 Z34961 Z34962 Z34963 AY927663 JN158517 DQ535261 DQ535284 DQ535416 DQ535445 DQ535451 DQ535460 EF177997 EF178006 EF178014 GU570268 Z35123 M18516 AF062105 AF062117 AF062156 AF062161 AF062175 AF062193 AF062198 AF062208 AF174026 AY172957 L06923 M62723 X65889 Z14214 Z47222 Z47224 Z47227 Z47233 Z47244 Z47245 Z47246 Z47247 Z47248 Z47249 Z47250 Z47251 Z47252 Z47253 Z47254 Z47255 Z47256 Z47257 Z47258 Z47259 Z47260 Z47261 Z47262 Z47263 Z47264 Z47265 Z47266 Z47267 Z47268 Z47269 Z47270 Z47271 Z47272 Z47273 Z80837 Z80853 CU688244 L23561 M24669 M24670 TSC_hg19_v1_chr14_-_107170387 BC062336	-2702	-	GQ232991 EU814957 AY003867 GQ233006 AY003724 AY003757 FJ840009 GU552709 AY003791 FJ840366 JF810271 FJ840139 FJ874031 AF017464 HM774748 HM775002 HQ704029 DQ524134 DQ840815 DQ840856 AY530312 AY941926 AY986399 DQ100849 AB067106 AB363089 DQ535377 U00563 U64502 AY392909 AY393069 AY393070 AF062111 AF062168 X81739 X81750 Z14221 TSC_hg19_v1_chr14_-_107131555 AK097017 AK128476 AK130433	-41548	-	FJ840101 FJ840103 FJ840105 FJ840106 FJ840110 FJ840116 FJ840119 FJ840153 FJ840184 FJ840185 FJ840188 FJ840189 FJ840190 FJ840192 FJ840197 FJ840199 FJ840203 FJ840206 FJ840207 FJ840208 FJ840209 FJ873863 FJ873875 FJ873894 FJ873921 FJ873929 FJ873938 FJ873947 FJ873950 FJ873952 FJ873965 FJ873977 FJ873996 FJ873997 FJ873999 FJ874008 FJ874014 FJ874026 FJ874040 FJ874044 FJ874061 FJ874068 FJ874078 FJ874079 FJ874080 HM116116 HM116121 HM116146 HM116172 HM116181 HM116193 HM116196 HM116197 HM116201 HM116225 GQ232804 GQ232899 AY003747 AY392896 AY393031 AY393032 AY393052 AY393293 AY393389 AY393434 AY393562 AF103042 AF459629 HM774620 HM774632 AM183987 AM279526 AY312400 EF177989 DQ926546 AJ389183 DQ100956 DQ926096 U00507 AB066845 AB066846 AB066847 AB066848 AB066849 AB066853 AB066854 AB066855 AB066856 AB066860 AB066863 AB066867 AB066872 AB066875 AB066876 AB067169 AB067183 AB067187 AB067188 AB067191 AB067197 AB067198 AB067200 AB067201 AB067203 AB067204 AB067205 AB067206 AB067207 AB067208 AB067209 AB067210 AB067211 AB067212 AB067213 AB067215 AB067216 AB067217 AB067219 AB067220 AB067227 AB067230 AF062247 AF174045 AF174063 AF174117 AF442758 AJ239338 AJ239347 AJ389184 AY781820 AY941845 DQ926224 DQ926451 FJ385297 GU570281 GU570282 HQ378332 U00575 U77371 X79160 Z80836 DQ535270 DQ535432 L28050 M34027 AF062153 AJ131058 AY190826 L21960 TSC_hg19_v1_chr14_-_107179280 AK097955	6253	-	JF810265 DQ454799 FJ840007 FJ840015 DQ454561 DQ454955 DQ454612 DQ454663 DQ454685 FJ840092 FJ840295 FJ873837 AJ008218 JF810272 JF810273 AY003862 AJ132562 Y08732 AF103327 EU099062 EU620029 GQ504979 HQ392897 AF103116 AF103087 AF103100 HM774925 JN110942 HM774229 FJ385350 GQ504960 HM774112 HM774402 HM774448 HM774462 HM774524 HM774766 HM775010 AF103135 HM774927 HM774932 HM774189 U00529 Y14940 AF103057 AF103351 EU146338 L03141 L03153 AF029328 AF485459 DQ431489 L03143 L03173 L03177 AF035801 AY423195 AY423198 AY423206 DQ431488 DQ431492 HM995020 DQ431490 GU570297 HM152513 HM994969 HM994972 HM994977 HM994978 HM994981 HM994982 HM994989 HM995522 HM995532 HM996141 HM996526 DQ187603 DQ187629 DQ322887 DQ322888 DQ322889 DQ322890 DQ322960 DQ840663 DQ840674 DQ840675 DQ840677 DQ840678 DQ840680 DQ840681 DQ840682 DQ840683 DQ840687 DQ840758 DQ840769 DQ840770 DQ840771 DQ840773 DQ840781 DQ840844 DQ840857 DQ840859 DQ840860 DQ840863 DQ840910 DQ840917 DQ840918 AF021973 AF048774 AF115122 AF151702 AF174111 AJ238039 AJ579199 AJ579279 AY866726 AY866767 DQ100754 DQ100773 DQ100787 DQ100849 DQ100977 DQ840729 DQ926055 DQ926218 DQ926255 DQ926308 EF177956 EF178021 GQ267831 U96395 X99352 Y17142 AB063699 AB063849 AB063916 AB067258 AB363156 AF021945 AF129753 AF471200 AF471528 AF471540 AF471541 AF471542 AF471546 AJ300788 AJ389185 AJ556647 AJ556667 AJ579161 AY554174 AY554177 AY554178 AY573190 AY640527 AY640562 AY846273 AY971106 D83679 DQ065693 DQ535269 DQ535318 DQ535335 DQ535453 DQ535464 DQ535482 DQ926153 DQ926492 EF178117 EF178127 EF178131 EU835555 FJ195515 FJ492899 FN563769 GU570345 GU570350 HQ378386 JF806284 U97244 X99353 L33033 Z11950 BC033178 TSC_hg19_v1_chr14_-_107199472	26363	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	38364	-	M87789|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC069016|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123800|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC025314|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC026038|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126133|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK130642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097360|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097364|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128394|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016381|IGHM|3507|immunoglobulin heavy constant mu##AK096985|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097305|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097356|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123070|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129512|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129622|IGHM|3507|immunoglobulin heavy constant mu##AK129777|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK131065|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC070333|IGHV1-69|28461|immunoglobulin heavy variable 1-69##AK097361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097363|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058027|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129809|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF035025|IGHV1-69|28461|immunoglobulin heavy variable 1-69##BC062336|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097017|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130433|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097955|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC033178|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.96924	CTCF.p2:17:0.969
chr2	8824938	8825118	reg1004379.p1	4.733	+	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-2825	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1767441	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1807165	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	152691	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	318793	-	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	521864	+	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	0.0	
chr5	16690477	16690612	reg1028236.p1	4.733	+	TSC_hg19_v1_chr5_-_16617097 BC053326 AK025808 NM_001034850	-73419	-	NM_019000	-181438	-	TSC_hg19_v1_chr5_-_16465884 BC010545 BC008752 NM_033414 AY046059	-224668	-	TSC_hg19_v1_chr5_-_16738346 AK295736	47876	-	AK316138 TSC_hg19_v1_chr5_-_16742338	51793	-	BC050682 BC041694 TSC_hg19_v1_chr5_-_16936357 BC108736 BC032669	245784	-	BC053326|FAM134B|54463|family with sequence similarity 134, member B##AK025808|FAM134B|54463|family with sequence similarity 134, member B##NM_001034850|FAM134B|54463|family with sequence similarity 134, member B##NM_019000|FAM134B|54463|family with sequence similarity 134, member B##BC010545|ZNF622|90441|zinc finger protein 622##BC008752|ZNF622|90441|zinc finger protein 622##NM_033414|ZNF622|90441|zinc finger protein 622##AY046059|ZNF622|90441|zinc finger protein 622##AK295736|MYO10|4651|myosin X##AK316138|MYO10|4651|myosin X##BC050682|MYO10|4651|myosin X##BC041694|MYO10|4651|myosin X##BC108736|MYO10|4651|myosin X##BC032669|MYO10|4651|myosin X	0.699543	CTCF.p2:-10:0.700
chr6	137423729	137423863	reg1020271.p1	4.733	+	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	-57551	-	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	-57958	-	AK316095 BC087842 NM_001008783 AK295424	-180343	+	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	70955	-	TSC_hg19_v1_chr6_-_137540496 BT006814 AB527981 CU675119 AF056979 AK294252	116672	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	116716	-	AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2##BT006814|IFNGR1|3459|interferon gamma receptor 1##AF056979|IFNGR1|3459|interferon gamma receptor 1##AK294252|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1	0.0	
chrX	114984592	114984772	reg1006821.p2	4.733	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-156814	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-187640	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-189076	+	BC003645 TSC_hg19_v1_chrX_-_115085443	100757	-	AK313927 NM_000686 X87723 U16957	317313	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	583085	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr11	101878692	101878857	reg1029105.p1	4.732	+	BC049170 BC053957 NM_178127	-91522	-	TSC_hg19_v1_chr11_+_101785949 AK309479 BX647415	-92782	+	TSC_hg19_v1_chr11_+_101785752 NM_020802 AK057230 BC036525 BC146807	-92987	+	NM_001195005 NM_032930 AK094851 BC054869 TSC_hg19_v1_chr11_+_101918188 BC006128	39409	+	TSC_hg19_v1_chr11_+_101981177 AK300414 NM_001130145 NM_001195044 NM_006106 BC038235 AB528588 AB567720 AB567721 AY316529	102428	+	NM_001195045 AK316116	104433	+	BC049170|ANGPTL5|253935|angiopoietin-like 5##BC053957|ANGPTL5|253935|angiopoietin-like 5##NM_178127|ANGPTL5|253935|angiopoietin-like 5##BX647415|KIAA1377|57562|KIAA1377##NM_020802|KIAA1377|57562|KIAA1377##AK057230|KIAA1377|57562|KIAA1377##BC036525|KIAA1377|57562|KIAA1377##BC146807|KIAA1377|57562|KIAA1377##NM_001195005|C11orf70|85016|chromosome 11 open reading frame 70##NM_032930|C11orf70|85016|chromosome 11 open reading frame 70##AK094851|C11orf70|85016|chromosome 11 open reading frame 70##BC054869|C11orf70|85016|chromosome 11 open reading frame 70##BC006128|C11orf70|85016|chromosome 11 open reading frame 70##AK300414|YAP1|10413|Yes-associated protein 1##NM_001130145|YAP1|10413|Yes-associated protein 1##NM_001195044|YAP1|10413|Yes-associated protein 1##NM_006106|YAP1|10413|Yes-associated protein 1##BC038235|YAP1|10413|Yes-associated protein 1##AB567720|YAP1|10413|Yes-associated protein 1##AB567721|YAP1|10413|Yes-associated protein 1##AY316529|YAP1|10413|Yes-associated protein 1##NM_001195045|YAP1|10413|Yes-associated protein 1##AK316116|YAP1|10413|Yes-associated protein 1	0.999305	CTCF.p2:-7:0.999
chr1	229390752	229390888	reg1027715.p1	4.732	+	TSC_hg19_v1_chr1_+_228871199 AB209511 AK289971 BC040076 AF282258 AB074878 AB051826 AF378087	-519521	+	TSC_hg19_v1_chr1_+_228870806 NM_021205 AF211836	-519976	+	AK055963 TSC_hg19_v1_chr1_+_228783500	-607389	+	AK313807 TSC_hg19_v1_chr1_+_229406857 BC004309 NM_004578 AY585832	16065	+	BC002438 TSC_hg19_v1_chr1_+_229407039 AK223009 M28211 AB463206 AF498934 AM392940 AM393585 DQ892636 DQ895874	16230	+	BC107681 NM_006542	49308	+	AB209511|RHOU|58480|ras homolog gene family, member U##AK289971|RHOU|58480|ras homolog gene family, member U##BC040076|RHOU|58480|ras homolog gene family, member U##AF282258|RHOU|58480|ras homolog gene family, member U##AB074878|RHOU|58480|ras homolog gene family, member U##AB051826|RHOU|58480|ras homolog gene family, member U##AF378087|RHOU|58480|ras homolog gene family, member U##NM_021205|RHOU|58480|ras homolog gene family, member U##AF211836|RHOU|58480|ras homolog gene family, member U##AK055963|DUSP5P|574029|dual specificity phosphatase 5 pseudogene##AK313807|RAB4A|5867|RAB4A, member RAS oncogene family##BC004309|RAB4A|5867|RAB4A, member RAS oncogene family##NM_004578|RAB4A|5867|RAB4A, member RAS oncogene family##AY585832|RAB4A|5867|RAB4A, member RAS oncogene family##BC002438|RAB4A|5867|RAB4A, member RAS oncogene family##AK223009|RAB4A|5867|RAB4A, member RAS oncogene family##M28211|RAB4A|5867|RAB4A, member RAS oncogene family##AF498934|RAB4A|5867|RAB4A, member RAS oncogene family##AM392940|RAB4A|5867|RAB4A, member RAS oncogene family##AM393585|RAB4A|5867|RAB4A, member RAS oncogene family##DQ892636|RAB4A|5867|RAB4A, member RAS oncogene family##DQ895874|RAB4A|5867|RAB4A, member RAS oncogene family##BC107681|SPHAR|10638|S-phase response (cyclin related)##NM_006542|SPHAR|10638|S-phase response (cyclin related)	0.0	
chr12	74415777	74415857	reg1026462.p1	4.732	+	TSC_hg19_v1_chr12_-_72667288 BC040230	-1748547	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	-1749313	+	AK095156 TSC_hg19_v1_chr12_-_72666355	-1749474	-	NM_001136262 TSC_hg19_v1_chr12_+_74931614 AK056642	515768	+	TSC_hg19_v1_chr12_+_74931622 BC009111 AL713650	515822	+	AK054742 TSC_hg19_v1_chr12_+_74933681	517803	+	BC040230|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AK095156|LOC283392|283392|uncharacterized LOC283392##NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B##AK056642|ATXN7L3B|552889|ataxin 7-like 3B##BC009111|ATXN7L3B|552889|ataxin 7-like 3B##AL713650|ATXN7L3B|552889|ataxin 7-like 3B	0.989014	CTCF.p2:-5:0.989
chr2	178589310	178589489	reg1001899.p1	4.732	+	AK292395 BC042848 NM_152275	-105714	-	TSC_hg19_v1_chr2_-_178483463 CU692122 AK057530 AK125104 BC048006	-105971	-	TSC_hg19_v1_chr2_-_178417525 AK296828 AK055552 BC033795 NM_152517	-171914	-	AJ251509 NM_001077196	164065	-	AF281865 NM_001077358	198143	-	BC112393 BC114431 AB036704 NM_016953 TSC_hg19_v1_chr2_-_178937505 AK309155	348109	-	AK292395|TTC30A|92104|tetratricopeptide repeat domain 30A##BC042848|TTC30A|92104|tetratricopeptide repeat domain 30A##NM_152275|TTC30A|92104|tetratricopeptide repeat domain 30A##AK057530|TTC30A|92104|tetratricopeptide repeat domain 30A##AK125104|TTC30A|92104|tetratricopeptide repeat domain 30A##BC048006|TTC30A|92104|tetratricopeptide repeat domain 30A##AK296828|TTC30B|150737|tetratricopeptide repeat domain 30B##AK055552|TTC30B|150737|tetratricopeptide repeat domain 30B##BC033795|TTC30B|150737|tetratricopeptide repeat domain 30B##NM_152517|TTC30B|150737|tetratricopeptide repeat domain 30B##AJ251509|PDE11A|50940|phosphodiesterase 11A##NM_001077196|PDE11A|50940|phosphodiesterase 11A##AF281865|PDE11A|50940|phosphodiesterase 11A##NM_001077358|PDE11A|50940|phosphodiesterase 11A##BC112393|PDE11A|50940|phosphodiesterase 11A##BC114431|PDE11A|50940|phosphodiesterase 11A##AB036704|PDE11A|50940|phosphodiesterase 11A##NM_016953|PDE11A|50940|phosphodiesterase 11A	0.0	
chr3	90142313	90142426	reg1028824.p1	4.732	+	M83941 AF213460 BC026247 TSC_hg19_v1_chr3_+_89156840 AK291411 AB384708	-985519	+	AF213459 NM_005233 NM_182644 BC063282 TSC_hg19_v1_chr3_+_89156770	-985648	+	AL832398 NM_173824 TSC_hg19_v1_chr3_+_88199126 BC024188 AK297719 AK313547	-1943341	+	AB590252 DQ892389 DQ895602 TSC_hg19_v1_chr3_-_93692741 Y00692 AK292994	3550307	-	TSC_hg19_v1_chr3_-_93692932 BC015801 NM_000313	3550549	-	TSC_hg19_v1_chr3_+_93698998 BC073842 NM_001174150 NM_001174151 NM_144996 NM_182896 CR936753 BC094725 BC104033 BC104034 BC104035 BC104036 AK299284 BC031093 AK296994 BC062993 BC015439 CR936763 AL713789 CR936756	3556658	+	M83941|EPHA3|2042|EPH receptor A3##AF213460|EPHA3|2042|EPH receptor A3##BC026247|EPHA3|2042|EPH receptor A3##AK291411|EPHA3|2042|EPH receptor A3##AF213459|EPHA3|2042|EPH receptor A3##NM_005233|EPHA3|2042|EPH receptor A3##NM_182644|EPHA3|2042|EPH receptor A3##BC063282|EPHA3|2042|EPH receptor A3##AL832398|C3orf38|285237|chromosome 3 open reading frame 38##NM_173824|C3orf38|285237|chromosome 3 open reading frame 38##BC024188|C3orf38|285237|chromosome 3 open reading frame 38##AK297719|C3orf38|285237|chromosome 3 open reading frame 38##AK313547|C3orf38|285237|chromosome 3 open reading frame 38##DQ892389|PROS1|5627|protein S (alpha)##DQ895602|PROS1|5627|protein S (alpha)##Y00692|PROS1|5627|protein S (alpha)##AK292994|PROS1|5627|protein S (alpha)##BC015801|PROS1|5627|protein S (alpha)##NM_000313|PROS1|5627|protein S (alpha)##BC073842|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174150|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174151|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_144996|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_182896|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936753|ARL13B|200894|ADP-ribosylation factor-like 13B##BC094725|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104033|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104034|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104035|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104036|ARL13B|200894|ADP-ribosylation factor-like 13B##AK299284|ARL13B|200894|ADP-ribosylation factor-like 13B##BC031093|ARL13B|200894|ADP-ribosylation factor-like 13B##AK296994|ARL13B|200894|ADP-ribosylation factor-like 13B##BC062993|ARL13B|200894|ADP-ribosylation factor-like 13B##BC015439|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936763|ARL13B|200894|ADP-ribosylation factor-like 13B##AL713789|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936756|ARL13B|200894|ADP-ribosylation factor-like 13B	0.250539	CTCF.p2:6:0.251
chr7	47523564	47523662	reg1029497.p1	4.732	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-1562807	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-1590479	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-1595508	+	TSC_hg19_v1_chr7_-_47579207 BC071791	55596	-	TSC_hg19_v1_chr7_-_47621681 CR749644	98050	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	98170	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.332515	CTCF.p2:2:0.333
chr8	103000869	103001049	reg1025838.p1	4.732	+	NM_032041	-197521	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-197759	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-197776	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	135564	-	NM_001040630	136175	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	250214	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.0	
chr8	66697431	66697534	reg1028603.p2	4.732	+	NM_001145838 CU692168 BX537854 D13634	-115315	+	NM_001145839 NM_014637 TSC_hg19_v1_chr8_+_66556973 AK316202 BX647507 AK304716 BC036116 BC043498 AK298945	-140522	+	TSC_hg19_v1_chr8_-_66546413 BC011607 BC018846 NM_018120	-151050	-	HQ258418 AK290801 BC058025 BC126360 NM_002603 U67932	3769	-	NM_001242318	56486	-	TSC_hg19_v1_chr8_-_66754300 AK292680	56810	-	NM_001145838|MTFR1|9650|mitochondrial fission regulator 1##BX537854|MTFR1|9650|mitochondrial fission regulator 1##D13634|MTFR1|9650|mitochondrial fission regulator 1##NM_001145839|MTFR1|9650|mitochondrial fission regulator 1##NM_014637|MTFR1|9650|mitochondrial fission regulator 1##AK316202|MTFR1|9650|mitochondrial fission regulator 1##BX647507|MTFR1|9650|mitochondrial fission regulator 1##AK304716|MTFR1|9650|mitochondrial fission regulator 1##BC036116|MTFR1|9650|mitochondrial fission regulator 1##BC043498|MTFR1|9650|mitochondrial fission regulator 1##AK298945|MTFR1|9650|mitochondrial fission regulator 1##BC011607|ARMC1|55156|armadillo repeat containing 1##BC018846|ARMC1|55156|armadillo repeat containing 1##NM_018120|ARMC1|55156|armadillo repeat containing 1##HQ258418|PDE7A|5150|phosphodiesterase 7A##AK290801|PDE7A|5150|phosphodiesterase 7A##BC058025|PDE7A|5150|phosphodiesterase 7A##BC126360|PDE7A|5150|phosphodiesterase 7A##NM_002603|PDE7A|5150|phosphodiesterase 7A##U67932|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##AK292680|PDE7A|5150|phosphodiesterase 7A	0.01706	
chr18	74284611	74284707	reg1023170.p2	4.731	+	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	-77504	-	BC108287 TSC_hg19_v1_chr18_-_74092260	-192409	-	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-1145037	-	TSC_hg19_v1_chr18_-_74534239 BC032908	249580	-	TSC_hg19_v1_chr18_+_74534512 BX648028	249851	+	AF085243 AF085244 NM_007345	251456	+	D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC108287|ZNF516|9658|zinc finger protein 516##BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##BC032908|LOC100131655|100131655|uncharacterized LOC100131655##BX648028|ZNF236|7776|zinc finger protein 236##AF085243|ZNF236|7776|zinc finger protein 236##AF085244|ZNF236|7776|zinc finger protein 236##NM_007345|ZNF236|7776|zinc finger protein 236	0.373984	CTCF.p2:0:0.374
chr7	120977622	120977722	reg1025493.p1	4.731	+	AF169963 NM_057168	-8583	+	AF152584 NM_016087	-12252	+	AK025639 AK225313 TSC_hg19_v1_chr7_+_120702920	-274799	+	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	58665	-	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	58742	-	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	535489	+	AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16##AK025639|C7orf58|79974|chromosome 7 open reading frame 58##AK225313|C7orf58|79974|chromosome 7 open reading frame 58##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C##AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1	0.051311	
chr8	58136234	58136324	reg1002979.p2	4.731	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-229853	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-229877	-	TSC_hg19_v1_chr8_-_57906381 BC017797	-229901	-	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	770878	+	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	1187606	+	X56088 M93133 BC101777 BC112184 NM_000780	1276428	-	AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	0.0	
chr17	38269332	38269460	reg1004019.p1	4.730	+	TSC_hg19_v1_chr17_-_38256983 M24898 NM_021724	-12422	-	M34339 X72631 TSC_hg19_v1_chr17_-_38256833 BC047875 AK315270 AK300155 BC056148	-12674	-	TSC_hg19_v1_chr17_-_38252967 AY429554	-16415	-	CR749360 TSC_hg19_v1_chr17_+_38278225	8826	+	NM_001012241 BC118997 BC122543	9431	+	EU831932 EU832027 TSC_hg19_v1_chr17_+_38279490	10083	+	M24898|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##NM_021724|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AY429554|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##CR749360|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##NM_001012241|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##BC118997|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##BC122543|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##EU831932|MSL1|339287|male-specific lethal 1 homolog (Drosophila)##EU832027|MSL1|339287|male-specific lethal 1 homolog (Drosophila)	0.0	
chr21	37682503	37682630	reg1029430.p2	4.730	+	AJ237839 NM_005128	-145728	+	TSC_hg19_v1_chr21_-_37528616 AB004851 BC037580 BC047014	-153935	-	AB041012 NM_001236 AB124847 TSC_hg19_v1_chr21_+_37507383 AK223429 BC002812 AB004854 CR541709	-175217	+	TSC_hg19_v1_chr21_+_37692548 BC058002 NM_015358 AK295133 BC007311 D50926 BC094779 BC132731 BC144116 AK292957 AB489143	9953	+	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	75124	+	BC012126 NM_012130 AY355349	156165	-	AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2##AB004851|LOC100506428|100506428|uncharacterized LOC100506428##BC037580|LOC100506428|100506428|uncharacterized LOC100506428##BC047014|LOC100506428|100506428|uncharacterized LOC100506428##AB041012|CBR3|874|carbonyl reductase 3##NM_001236|CBR3|874|carbonyl reductase 3##AB124847|CBR3|874|carbonyl reductase 3##AK223429|CBR3|874|carbonyl reductase 3##BC002812|CBR3|874|carbonyl reductase 3##AB004854|CBR3|874|carbonyl reductase 3##CR541709|CBR3|874|carbonyl reductase 3##BC058002|MORC3|23515|MORC family CW-type zinc finger 3##NM_015358|MORC3|23515|MORC family CW-type zinc finger 3##AK295133|MORC3|23515|MORC family CW-type zinc finger 3##BC007311|MORC3|23515|MORC family CW-type zinc finger 3##D50926|MORC3|23515|MORC family CW-type zinc finger 3##BC094779|MORC3|23515|MORC family CW-type zinc finger 3##BC132731|MORC3|23515|MORC family CW-type zinc finger 3##BC144116|MORC3|23515|MORC family CW-type zinc finger 3##AK292957|MORC3|23515|MORC family CW-type zinc finger 3##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14	0.0	
chr7	104652965	104653114	reg1030941.p1	4.730	+	TSC_hg19_v1_chr7_-_104567089 BC050337	-85949	-	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-683821	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-804608	-	TSC_hg19_v1_chr7_-_104653491 AK124046	443	-	TSC_hg19_v1_chr7_-_104654062 AK094372	1035	-	TSC_hg19_v1_chr7_-_104654534 BC017007 AK123476	1463	-	BC050337|LOC723809|723809|uncharacterized LOC723809##AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545##BC017007|LOC100216545|100216545|uncharacterized LOC100216545##AK123476|LOC100216545|100216545|uncharacterized LOC100216545	0.0	
chr10	134388968	134389095	reg1027062.p2	4.729	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	-37719	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-130348	+	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	-178322	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	210475	-	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	367007	-	NM_001083909 TSC_hg19_v1_chr10_+_134901429 AK124728	512426	+	BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40##NM_001083909|GPR123|84435|G protein-coupled receptor 123##AK124728|GPR123|84435|G protein-coupled receptor 123	0.0	
chr10	64287212	64287393	reg1022341.p2	4.729	+	AJ505150 NM_199452	-7096	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-153259	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-258763	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	277240	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	277355	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	288795	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.0	
chr11	288535	288704	reg1031250.p1	4.729	+	AF479748 AY154461 NM_138329	-10050	+	TSC_hg19_v1_chr11_+_236975 AK295944 AK094775 AK222895 AB009398 BC001100 AF083245 AK307447 AF107837 BC001747 BX647314 AB528493 DQ892171 DQ895365 AF086708 BT007307	-51612	+	AK316175 TSC_hg19_v1_chr11_-_236906 AK308681	-51730	-	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	523	+	BC150562 BC150563 NM_001025295	10902	-	NM_006435 TSC_hg19_v1_chr11_+_308199 BC009696 DQ891667 DQ894615 BT009859 CR456894 CR541874 X02490	19551	+	AF479748|NLRP6|171389|NLR family, pyrin domain containing 6##AY154461|NLRP6|171389|NLR family, pyrin domain containing 6##NM_138329|NLRP6|171389|NLR family, pyrin domain containing 6##AK295944|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK094775|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK222895|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AB009398|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001100|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF083245|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK307447|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF107837|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001747|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BX647314|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ892171|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ895365|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF086708|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BT007307|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK316175|SIRT3|23410|sirtuin 3##AK308681|SIRT3|23410|sirtuin 3##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5##NM_006435|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC009696|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ891667|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ894615|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BT009859|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR456894|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR541874|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##X02490|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)	0.0	
chr18	13610934	13611114	reg1027838.p1	4.729	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-392239	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-619679	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-662960	+	NM_001003674 NM_001003675	640	+	AF009426 AF009427 NM_004338 NM_181483	9842	+	TSC_hg19_v1_chr18_-_13726549 AK055618	115482	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.058314	
chr2	3775809	3775979	reg1026624.p1	4.729	+	AK302299 NM_018436 BC029652	-70097	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-133325	+	X74803 TSC_hg19_v1_chr2_+_3627765	-148149	+	U23752 AB028641 NM_003108 BC025789 AB464713	2056921	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	3230006	-	TSC_hg19_v1_chr2_-_7006650 AK308509	3230809	-	AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##X74803|RPS7|6201|ribosomal protein S7##U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	0.199899	
chr6	11732298	11732428	reg1022576.p1	4.729	+	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-193865	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-349823	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-499453	-	NM_001143948 NM_032744	46916	-	NM_002114	280360	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	558230	+	NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr6	28109460	28109638	reg1027099.p1	4.729	+	TSC_hg19_v1_chr6_-_28104623 AK309286 BC043177	-4951	-	AK025844 AK294017 AK309837 NM_025231 TSC_hg19_v1_chr6_+_28092406 BC004255	-17150	+	NM_003447	-61068	+	TSC_hg19_v1_chr6_+_28109660 AB208793 BC096282 BC096283 BC096284 BC130032 NM_006298 U57796	142	+	AK292767 BC050562 BC015543 BC039027 TSC_hg19_v1_chr6_-_28186889	77227	-	NM_001199479 NM_001199480 NM_006299 AK304013 BC010374 TSC_hg19_v1_chr6_+_28193073 AK226035 AY261373 U62392	83523	+	AK309286|LOC100129195|100129195|uncharacterized LOC100129195##BC043177|LOC100129195|100129195|uncharacterized LOC100129195##AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16##NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16##BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16##NM_003447|ZNF165|7718|zinc finger protein 165##AB208793|ZNF192|7745|zinc finger protein 192##BC096282|ZNF192|7745|zinc finger protein 192##BC096283|ZNF192|7745|zinc finger protein 192##BC096284|ZNF192|7745|zinc finger protein 192##BC130032|ZNF192|7745|zinc finger protein 192##NM_006298|ZNF192|7745|zinc finger protein 192##U57796|ZNF192|7745|zinc finger protein 192##AK292767|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC050562|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC015543|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC039027|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##NM_001199479|ZNF193|7746|zinc finger protein 193##NM_001199480|ZNF193|7746|zinc finger protein 193##NM_006299|ZNF193|7746|zinc finger protein 193##AK304013|ZNF193|7746|zinc finger protein 193##BC010374|ZNF193|7746|zinc finger protein 193##AK226035|ZNF193|7746|zinc finger protein 193##AY261373|ZNF193|7746|zinc finger protein 193##U62392|ZNF193|7746|zinc finger protein 193	0.014582	
chr7	75849559	75849739	reg1029009.p2	4.729	+	TSC_hg19_v1_chr7_+_75831199 NM_001110199 BC029292	-18444	+	BC001917 TSC_hg19_v1_chr7_+_75677453 AK316587 DQ893080 DQ896341 AK293460 CR536548	-172184	+	AK095803 AK290779 TSC_hg19_v1_chr7_+_75677402	-172247	+	TSC_hg19_v1_chr7_+_75931989 NM_001540 U90906 BC000510 BC012292 AF086135 X54079 AK296890	82260	+	AK311894 TSC_hg19_v1_chr7_+_75931991 BC012768 BC073768 AB020027 AL050380 DQ891304 DQ893349 DQ894489 DQ896669 AB528488 BT019888 CR407614 CR536489 BC014920	82381	+	TSC_hg19_v1_chr7_+_75932877 AK311446	83261	+	NM_001110199|SRRM3|222183|serine/arginine repetitive matrix 3##BC029292|SRRM3|222183|serine/arginine repetitive matrix 3##BC001917|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK316587|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ893080|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ896341|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK293460|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##CR536548|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK095803|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK290779|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##NM_001540|HSPB1|3315|heat shock 27kDa protein 1##U90906|HSPB1|3315|heat shock 27kDa protein 1##BC000510|HSPB1|3315|heat shock 27kDa protein 1##BC012292|HSPB1|3315|heat shock 27kDa protein 1##X54079|HSPB1|3315|heat shock 27kDa protein 1##AK296890|HSPB1|3315|heat shock 27kDa protein 1##AK311894|HSPB1|3315|heat shock 27kDa protein 1##BC012768|HSPB1|3315|heat shock 27kDa protein 1##BC073768|HSPB1|3315|heat shock 27kDa protein 1##AB020027|HSPB1|3315|heat shock 27kDa protein 1##AL050380|HSPB1|3315|heat shock 27kDa protein 1##DQ891304|HSPB1|3315|heat shock 27kDa protein 1##DQ893349|HSPB1|3315|heat shock 27kDa protein 1##DQ894489|HSPB1|3315|heat shock 27kDa protein 1##DQ896669|HSPB1|3315|heat shock 27kDa protein 1##BT019888|HSPB1|3315|heat shock 27kDa protein 1##CR407614|HSPB1|3315|heat shock 27kDa protein 1##CR536489|HSPB1|3315|heat shock 27kDa protein 1##BC014920|HSPB1|3315|heat shock 27kDa protein 1##AK311446|HSPB1|3315|heat shock 27kDa protein 1	0.08172	
chr8	21273954	21274064	reg1027679.p1	4.729	+	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	-1161263	-	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	-1219087	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	-1219116	+	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	371783	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	372357	-	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	497156	-	AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa	0.182235	
chr10	97049491	97049616	reg1030010.p1	4.728	+	AK126134 NM_207321	-95597	+	M21942 M21941 DQ891400 DQ894579 M17397 M17398 AK303813 Y00498 AK292753 AK293327 AK293328 AK298401 AK315823 BC020596 NM_000770 NM_001198853 NM_001198854 NM_001198855	-220390	-	TSC_hg19_v1_chr10_+_96698414 AK289420 AK298458 BC020754 NM_000771 BC070317 M61855 M61857 BC125054 D00173 M21939 M15331 S46963	-351111	+	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	1229	-	AM393082 NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_006434	151362	-	TSC_hg19_v1_chr10_-_97321129 AB037717 BC152463 AK022468 AK300407 AK304753 AL117472 AM260536 NM_015385 NM_024991	271586	-	AK126134|C10orf129|142827|chromosome 10 open reading frame 129##NM_207321|C10orf129|142827|chromosome 10 open reading frame 129##M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1##AM393082|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1##NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1##AB037717|SORBS1|10580|sorbin and SH3 domain containing 1##BC152463|SORBS1|10580|sorbin and SH3 domain containing 1##AK022468|SORBS1|10580|sorbin and SH3 domain containing 1##AK300407|SORBS1|10580|sorbin and SH3 domain containing 1##AK304753|SORBS1|10580|sorbin and SH3 domain containing 1##AL117472|SORBS1|10580|sorbin and SH3 domain containing 1##AM260536|SORBS1|10580|sorbin and SH3 domain containing 1##NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1##NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1	0.021929	
chr14	81053521	81053637	reg1029890.p1	4.728	+	AK292210 NM_000793	-356183	-	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	-375675	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	-1307875	+	NM_152446	352304	-	BC045834 AK309833 TSC_hg19_v1_chr14_-_81408073	354479	-	AK303378 BC024205 NM_000369 NM_001018036 NM_001142626 M31774 BC108653 BC009237 M73747 M32215 BC063613 AB209207 BC120972 BC120973 BC127628 BC127629 BC141970 S49816 AB384880 AY429111 CU687778 S45272	368287	+	AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##NM_152446|CEP128|145508|centrosomal protein 128kDa##BC045834|CEP128|145508|centrosomal protein 128kDa##AK309833|CEP128|145508|centrosomal protein 128kDa##BC024205|TSHR|7253|thyroid stimulating hormone receptor##NM_000369|TSHR|7253|thyroid stimulating hormone receptor##NM_001018036|TSHR|7253|thyroid stimulating hormone receptor##NM_001142626|TSHR|7253|thyroid stimulating hormone receptor##M31774|TSHR|7253|thyroid stimulating hormone receptor##BC108653|TSHR|7253|thyroid stimulating hormone receptor##BC009237|TSHR|7253|thyroid stimulating hormone receptor##M73747|TSHR|7253|thyroid stimulating hormone receptor##M32215|TSHR|7253|thyroid stimulating hormone receptor##BC063613|TSHR|7253|thyroid stimulating hormone receptor##AB209207|TSHR|7253|thyroid stimulating hormone receptor##BC120972|TSHR|7253|thyroid stimulating hormone receptor##BC120973|TSHR|7253|thyroid stimulating hormone receptor##BC127628|TSHR|7253|thyroid stimulating hormone receptor##BC127629|TSHR|7253|thyroid stimulating hormone receptor##BC141970|TSHR|7253|thyroid stimulating hormone receptor##S49816|TSHR|7253|thyroid stimulating hormone receptor##AY429111|TSHR|7253|thyroid stimulating hormone receptor##S45272|TSHR|7253|thyroid stimulating hormone receptor	0.924881	CTCF.p2:-14:0.925
chr2	231679465	231679566	reg1030838.p2	4.728	+	AK292382 NM_001130849 NM_001130850 AK315692	-101237	+	TSC_hg19_v1_chr2_+_231577633 BC020570	-101871	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	-101969	+	TSC_hg19_v1_chr2_+_231729608 NM_001012514 NM_001012516 NM_030926	50045	+	TSC_hg19_v1_chr2_+_231729626 AF271781 AF272043	50114	+	TSC_hg19_v1_chr2_+_231729653 AK075361 AK090975 AK303199 AX746713	50130	+	AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##NM_016289|CAB39|51719|calcium binding protein 39##NM_001012514|ITM2C|81618|integral membrane protein 2C##NM_001012516|ITM2C|81618|integral membrane protein 2C##NM_030926|ITM2C|81618|integral membrane protein 2C##AF271781|ITM2C|81618|integral membrane protein 2C##AF272043|ITM2C|81618|integral membrane protein 2C##AK075361|ITM2C|81618|integral membrane protein 2C##AK090975|ITM2C|81618|integral membrane protein 2C##AK303199|ITM2C|81618|integral membrane protein 2C	0.751354	CTCF.p2:5:0.751
chr2	42970403	42970566	reg1028193.p2	4.728	+	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-174587	+	TSC_hg19_v1_chr2_+_42795781 BC053631 NM_020744 BC004227	-174763	+	TSC_hg19_v1_chr2_+_42721701 AK127245	-248782	+	AY158687 AB528920 AB083055 BC063549 NM_148962	20816	-	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	49267	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	482861	-	AK027304|MTA3|57504|metastasis associated 1 family, member 3##BC053631|MTA3|57504|metastasis associated 1 family, member 3##NM_020744|MTA3|57504|metastasis associated 1 family, member 3##BC004227|MTA3|57504|metastasis associated 1 family, member 3##AK127245|MTA3|57504|metastasis associated 1 family, member 3##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.0	
chr19	6942952	6943063	reg1028642.p2	4.727	+	BC059395 NM_001974 X81479 AK297003 AK131562 AK290401 AK291518 AK313495 AK297011 CU687372	-55410	+	TSC_hg19_v1_chr19_+_6772811 AB590871	-170199	+	TSC_hg19_v1_chr19_+_6772718 NM_005428 AK225710 AK313307	-170283	+	NM_001136507	87586	+	NM_001164419	97176	-	AF503919 NM_144614	106342	+	BC059395|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_001974|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##X81479|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297003|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK131562|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK290401|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK291518|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK313495|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297011|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor##NM_001136507|MBD3L5|284428|methyl-CpG binding domain protein 3-like 5##NM_001164419|MBD3L4|653656|methyl-CpG binding domain protein 3-like 4##AF503919|MBD3L2|125997|methyl-CpG binding domain protein 3-like 2##NM_144614|MBD3L2|125997|methyl-CpG binding domain protein 3-like 2	0.200288	CTCF.p2:21:0.200
chr2	42287330	42287445	reg1028070.p1	4.727	+	AB528999 TSC_hg19_v1_chr2_+_42275979	-11426	+	TSC_hg19_v1_chr2_+_42275160 NM_138370	-12255	+	AK124893 NM_001242815	-106445	-	TSC_hg19_v1_chr2_+_42396514 AB275889 NM_001145076 NM_019063 AK314702 BC146799 AF177377 BC067777 BC104647 BC140845 AB374363 AB462412 AB384933	109188	+	AF127788 BT007371 CR542208 CU675543 DQ890566 DQ893729 TSC_hg19_v1_chr2_-_42588354 AB007618 BC005251 BC007095 NM_004718	300946	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	433171	-	NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_001145076|EML4|27436|echinoderm microtubule associated protein like 4##NM_019063|EML4|27436|echinoderm microtubule associated protein like 4##AK314702|EML4|27436|echinoderm microtubule associated protein like 4##BC146799|EML4|27436|echinoderm microtubule associated protein like 4##AF177377|EML4|27436|echinoderm microtubule associated protein like 4##BC067777|EML4|27436|echinoderm microtubule associated protein like 4##BC104647|EML4|27436|echinoderm microtubule associated protein like 4##BC140845|EML4|27436|echinoderm microtubule associated protein like 4##AF127788|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BT007371|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##CR542208|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ890566|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ893729|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB007618|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC005251|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC007095|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##NM_004718|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3	0.0	
chr6	120468778	120468888	reg1034115.p1	4.727	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-797912	-	BX538186 AK091682 AX747126 NM_001100411	-998487	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-1068925	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	1186810	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	1287992	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	2251862	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.869245	CTCF.p2:-5:0.869
chr12	8782116	8782297	reg1024965.p1	4.726	+	AB040431 BC006296 NM_020661	-16767	-	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	-88732	-	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	-115975	+	TSC_hg19_v1_chr12_-_8815272 AK315807 BC005901 AK290585 AK299475	33090	-	TSC_hg19_v1_chr12_-_8815423 U37283 NM_003480	33195	-	AK124368 TSC_hg19_v1_chr12_-_8815486	33276	-	AB040431|AICDA|57379|activation-induced cytidine deaminase##BC006296|AICDA|57379|activation-induced cytidine deaminase##NM_020661|AICDA|57379|activation-induced cytidine deaminase##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##AK315807|MFAP5|8076|microfibrillar associated protein 5##BC005901|MFAP5|8076|microfibrillar associated protein 5##AK290585|MFAP5|8076|microfibrillar associated protein 5##AK299475|MFAP5|8076|microfibrillar associated protein 5##U37283|MFAP5|8076|microfibrillar associated protein 5##NM_003480|MFAP5|8076|microfibrillar associated protein 5##AK124368|MFAP5|8076|microfibrillar associated protein 5	0.0	
chr17	19450121	19450258	reg1030449.p2	4.726	+	AK301854 TSC_hg19_v1_chr17_+_19437179 AK222625 AK001709 AK302620 NM_018242 BC022390 AK225360 BC010661 BC058882 BC050592 CU691318	-12995	+	AK309372 NM_007148 AK313844 AK226052 BC038896 BC053989 AB026054 AB590107 EU446727	-135585	+	L38486 TSC_hg19_v1_chr17_-_19290504 BC047725 AK293056 AK304528 NM_001198695 NM_002404	-159688	-	U46689 TSC_hg19_v1_chr17_+_19552087 NM_000382 NM_001031806 AK292381 L47162 AK025677 AK315096 BC002430 DQ895880 EU176377 CR457422 AB208894	101954	+	BC062614 AB250364 AB250701 BC035288 BC050578 AK055758 AK307647 NM_001099646 NM_152908	169771	-	AK292193 NM_001135168	198582	-	AK301854|SLC47A1|55244|solute carrier family 47, member 1##AK222625|SLC47A1|55244|solute carrier family 47, member 1##AK001709|SLC47A1|55244|solute carrier family 47, member 1##AK302620|SLC47A1|55244|solute carrier family 47, member 1##NM_018242|SLC47A1|55244|solute carrier family 47, member 1##AK225360|SLC47A1|55244|solute carrier family 47, member 1##BC010661|SLC47A1|55244|solute carrier family 47, member 1##BC058882|SLC47A1|55244|solute carrier family 47, member 1##BC050592|SLC47A1|55244|solute carrier family 47, member 1##AK309372|RNF112|7732|ring finger protein 112##NM_007148|RNF112|7732|ring finger protein 112##AK313844|RNF112|7732|ring finger protein 112##AK226052|RNF112|7732|ring finger protein 112##BC038896|RNF112|7732|ring finger protein 112##BC053989|RNF112|7732|ring finger protein 112##AB026054|RNF112|7732|ring finger protein 112##EU446727|RNF112|7732|ring finger protein 112##L38486|MFAP4|4239|microfibrillar-associated protein 4##BC047725|MFAP4|4239|microfibrillar-associated protein 4##AK293056|MFAP4|4239|microfibrillar-associated protein 4##AK304528|MFAP4|4239|microfibrillar-associated protein 4##NM_001198695|MFAP4|4239|microfibrillar-associated protein 4##NM_002404|MFAP4|4239|microfibrillar-associated protein 4##U46689|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_000382|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_001031806|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK292381|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##L47162|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK025677|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK315096|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC002430|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##DQ895880|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##EU176377|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##CR457422|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AB208894|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC062614|SLC47A2|146802|solute carrier family 47, member 2##AB250364|SLC47A2|146802|solute carrier family 47, member 2##AB250701|SLC47A2|146802|solute carrier family 47, member 2##BC035288|SLC47A2|146802|solute carrier family 47, member 2##BC050578|SLC47A2|146802|solute carrier family 47, member 2##AK055758|SLC47A2|146802|solute carrier family 47, member 2##AK307647|SLC47A2|146802|solute carrier family 47, member 2##NM_001099646|SLC47A2|146802|solute carrier family 47, member 2##NM_152908|SLC47A2|146802|solute carrier family 47, member 2##AK292193|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##NM_001135168|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1	0.239145	CTCF.p2:-11:0.239
chr17	38094522	38094669	reg1023796.p1	4.726	+	TSC_hg19_v1_chr17_-_38083855 AF373101 BC071833 AX775843 AK075212 BC017087 AF395708 AF373102 AK074811 NM_139280	-10763	-	BC054042 BC050710 AF151043 BC000638 BC018837 TSC_hg19_v1_chr17_-_38078103	-16589	-	AK000409 AK296607 NM_001042471 NM_001165958 NM_001165959	-19723	-	NM_001195545	3131	+	AK096439 NM_178171 BC109197	24649	+	TSC_hg19_v1_chr17_+_38137059 AK054611 AK094206 AK293539 AK300973 NM_002809 BC001684 BC012302	42470	+	AF373101|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC071833|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AX775843|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK075212|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC017087|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF395708|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF373102|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK074811|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##NM_139280|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC054042|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC050710|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF151043|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC000638|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC018837|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK000409|GSDMB|55876|gasdermin B##AK296607|GSDMB|55876|gasdermin B##NM_001042471|GSDMB|55876|gasdermin B##NM_001165958|GSDMB|55876|gasdermin B##NM_001165959|GSDMB|55876|gasdermin B##NM_001195545|LRRC3C|100505591|leucine rich repeat containing 3C##AK096439|GSDMA|284110|gasdermin A##NM_178171|GSDMA|284110|gasdermin A##BC109197|GSDMA|284110|gasdermin A##AK054611|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK094206|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK293539|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK300973|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##NM_002809|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC012302|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	0.03918	
chr20	52534365	52534506	reg1030447.p2	4.726	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-323636	-	AF041259 NM_006526	-334800	-	AK302570 NM_001193421	-732614	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	152627	-	AK315220 NM_003657	152868	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	256085	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr20	55622430	55622496	reg1045002.p2	4.726	+	TSC_hg19_v1_chr20_+_55204361 BC051829 NM_003222 AK314272 BC035664 U85658 X95693	-418033	+	BC014951 NM_001013646	-514180	+	AK131203 NM_080615	-521483	-	EU679366 AK094784 CU678997 DQ891494 DQ894685 EU176612 AB528364 CU678634 BC008584 M60316 AK312419 AK291186 TSC_hg19_v1_chr20_-_55841286 X51801	218732	-	TSC_hg19_v1_chr20_-_55841684 BC004248 NM_001719	219225	-	AF169385 NM_012444 NM_198265 BC033591 AF149310	282389	+	BC051829|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##NM_003222|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##AK314272|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##BC035664|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##U85658|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##X95693|TFAP2C|7022|transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)##BC014951|FAM209B|388799|family with sequence similarity 209, member B##NM_001013646|FAM209B|388799|family with sequence similarity 209, member B##AK131203|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##NM_080615|GCNT7|140687|glucosaminyl (N-acetyl) transferase family member 7##EU679366|BMP7|655|bone morphogenetic protein 7##AK094784|BMP7|655|bone morphogenetic protein 7##DQ891494|BMP7|655|bone morphogenetic protein 7##DQ894685|BMP7|655|bone morphogenetic protein 7##EU176612|BMP7|655|bone morphogenetic protein 7##BC008584|BMP7|655|bone morphogenetic protein 7##M60316|BMP7|655|bone morphogenetic protein 7##AK312419|BMP7|655|bone morphogenetic protein 7##AK291186|BMP7|655|bone morphogenetic protein 7##X51801|BMP7|655|bone morphogenetic protein 7##BC004248|BMP7|655|bone morphogenetic protein 7##NM_001719|BMP7|655|bone morphogenetic protein 7##AF169385|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_012444|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_198265|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##BC033591|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##AF149310|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)	0.0	
chr21	32211765	32211887	reg1029098.p1	4.726	+	AJ457063 AB096962 NM_181606	-9838	-	BC130397 BC133033 AB096961 AJ457064 NM_175857	-26262	-	NM_181619 AB096960 BC105029 BC105031	-84106	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	42032	-	AB096964 NM_001099219	198968	-	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	719532	-	AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##BC130397|KRTAP8-1|337879|keratin associated protein 8-1##BC133033|KRTAP8-1|337879|keratin associated protein 8-1##AB096961|KRTAP8-1|337879|keratin associated protein 8-1##AJ457064|KRTAP8-1|337879|keratin associated protein 8-1##NM_175857|KRTAP8-1|337879|keratin associated protein 8-1##NM_181619|KRTAP21-1|337977|keratin associated protein 21-1##AB096960|KRTAP21-1|337977|keratin associated protein 21-1##BC105029|KRTAP21-1|337977|keratin associated protein 21-1##BC105031|KRTAP21-1|337977|keratin associated protein 21-1##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1	0.806004	CTCF.p2:-9:0.806
chr9	139686253	139686371	reg1019939.p1	4.726	+	TSC_hg19_v1_chr9_+_139685818 CU675821	-478	+	TSC_hg19_v1_chr9_+_139685795 NM_032928 BC007834	-525	+	BC093893 BC093895 AY358618 NM_203347	-27351	-	NM_001039374 BC064582 BC137317 BC137318	4489	+	TSC_hg19_v1_chr9_+_139702376 NM_001173988 NM_001173989 NM_024718	16056	+	TSC_hg19_v1_chr9_+_139702390 GQ169126	16079	+	NM_032928|TMEM141|85014|transmembrane protein 141##BC007834|TMEM141|85014|transmembrane protein 141##BC093893|LCN15|389812|lipocalin 15##BC093895|LCN15|389812|lipocalin 15##AY358618|LCN15|389812|lipocalin 15##NM_203347|LCN15|389812|lipocalin 15##NM_001039374|KIAA1984|84960|KIAA1984##BC064582|KIAA1984|84960|KIAA1984##BC137317|KIAA1984|84960|KIAA1984##BC137318|KIAA1984|84960|KIAA1984##NM_001173988|C9orf86|55684|chromosome 9 open reading frame 86##NM_001173989|C9orf86|55684|chromosome 9 open reading frame 86##NM_024718|C9orf86|55684|chromosome 9 open reading frame 86##GQ169126|C9orf86|55684|chromosome 9 open reading frame 86	0.998788	CTCF.p2:-12:0.999
chrX	115002035	115002151	reg1008663.p1	4.726	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-174225	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-205051	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-206487	+	BC003645 TSC_hg19_v1_chrX_-_115085443	83346	-	AK313927 NM_000686 X87723 U16957	299902	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	565674	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr16	19566541	19566685	reg1030047.p1	4.725	+	NM_001199022 NM_014711 TSC_hg19_v1_chr16_+_19535277 BC036654 AK300426 AB007879 CR749255 BC030223	-31382	+	AY463154 BC014981 TSC_hg19_v1_chr16_-_19533421 AF306698 BC025273 BC001538 AF212862 BC012153 AK312912 NM_016641	-33237	-	AY236494 NM_024780 BC038118 AK097718 BC027602 AK131202	-98809	+	AK294885 NM_020314	123	+	TSC_hg19_v1_chr16_+_19567045 BX537867 AK095078 AK290286 AL832159 BC058845 AL833428 EU831926 EU832021	423	+	TSC_hg19_v1_chr16_+_19727698 AF520569 AF520570 AK000122 NM_153208	161124	+	NM_001199022|CCP110|9738|centriolar coiled coil protein 110kDa##NM_014711|CCP110|9738|centriolar coiled coil protein 110kDa##BC036654|CCP110|9738|centriolar coiled coil protein 110kDa##AK300426|CCP110|9738|centriolar coiled coil protein 110kDa##AB007879|CCP110|9738|centriolar coiled coil protein 110kDa##CR749255|CCP110|9738|centriolar coiled coil protein 110kDa##BC030223|CCP110|9738|centriolar coiled coil protein 110kDa##AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1##NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AY236494|TMC5|79838|transmembrane channel-like 5##NM_024780|TMC5|79838|transmembrane channel-like 5##BC038118|TMC5|79838|transmembrane channel-like 5##AK097718|TMC5|79838|transmembrane channel-like 5##BC027602|TMC5|79838|transmembrane channel-like 5##AK131202|TMC5|79838|transmembrane channel-like 5##AK294885|C16orf62|57020|chromosome 16 open reading frame 62##NM_020314|C16orf62|57020|chromosome 16 open reading frame 62##BX537867|C16orf62|57020|chromosome 16 open reading frame 62##AK095078|C16orf62|57020|chromosome 16 open reading frame 62##AK290286|C16orf62|57020|chromosome 16 open reading frame 62##AL832159|C16orf62|57020|chromosome 16 open reading frame 62##BC058845|C16orf62|57020|chromosome 16 open reading frame 62##AL833428|C16orf62|57020|chromosome 16 open reading frame 62##EU831926|C16orf62|57020|chromosome 16 open reading frame 62##EU832021|C16orf62|57020|chromosome 16 open reading frame 62##AF520569|IQCK|124152|IQ motif containing K##AF520570|IQCK|124152|IQ motif containing K##AK000122|IQCK|124152|IQ motif containing K##NM_153208|IQCK|124152|IQ motif containing K	0.139023	
chr17	42402324	42402482	reg1027575.p2	4.725	+	TSC_hg19_v1_chr17_-_42402202 NM_001143780 NM_016016	-196	-	TSC_hg19_v1_chr17_-_42402172 BC096819 BC009330 AK026060 AL133584 BC001398 AK289357 AK295478 AK301139	-237	-	AL133657 NM_001144825 NM_001144826 NM_006695 TSC_hg19_v1_chr17_+_42385950 AB209802 AK226045 BC006194 AK313669 BX537443 AF055026 CR456748 CU675291 U93871	-16413	+	BC000324 NM_002087 TSC_hg19_v1_chr17_+_42422623	20153	+	TSC_hg19_v1_chr17_+_42422640 AF055008	20234	+	TSC_hg19_v1_chr17_+_42422669 AK000607 AK222522 AK296090 X62320 AK303830	20273	+	NM_001143780|SLC25A39|51629|solute carrier family 25, member 39##NM_016016|SLC25A39|51629|solute carrier family 25, member 39##BC096819|SLC25A39|51629|solute carrier family 25, member 39##BC009330|SLC25A39|51629|solute carrier family 25, member 39##AK026060|SLC25A39|51629|solute carrier family 25, member 39##AL133584|SLC25A39|51629|solute carrier family 25, member 39##BC001398|SLC25A39|51629|solute carrier family 25, member 39##AK289357|SLC25A39|51629|solute carrier family 25, member 39##AK295478|SLC25A39|51629|solute carrier family 25, member 39##AK301139|SLC25A39|51629|solute carrier family 25, member 39##AL133657|RUNDC3A|10900|RUN domain containing 3A##NM_001144825|RUNDC3A|10900|RUN domain containing 3A##NM_001144826|RUNDC3A|10900|RUN domain containing 3A##NM_006695|RUNDC3A|10900|RUN domain containing 3A##AB209802|RUNDC3A|10900|RUN domain containing 3A##AK226045|RUNDC3A|10900|RUN domain containing 3A##BC006194|RUNDC3A|10900|RUN domain containing 3A##AK313669|RUNDC3A|10900|RUN domain containing 3A##BX537443|RUNDC3A|10900|RUN domain containing 3A##AF055026|RUNDC3A|10900|RUN domain containing 3A##CR456748|RUNDC3A|10900|RUN domain containing 3A##U93871|RUNDC3A|10900|RUN domain containing 3A##BC000324|GRN|2896|granulin##NM_002087|GRN|2896|granulin##AF055008|GRN|2896|granulin##AK000607|GRN|2896|granulin##AK222522|GRN|2896|granulin##AK296090|GRN|2896|granulin##X62320|GRN|2896|granulin##AK303830|GRN|2896|granulin	0.0	
chrX	113860932	113861040	reg1028482.p1	4.725	+	NM_000868 U49516 BC028688 AK295753 TSC_hg19_v1_chrX_+_113818558 M81778	-42414	+	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	-1776924	-	AB384557 AY987378 NM_001113490	-1794633	-	X95302 AK308523 GQ494004 U70981 AK291957 NM_000640 Y08768 AK309444	391188	-	NM_001145346 AK301904	562989	+	AB587552 TSC_hg19_v1_chrX_-_114468623 BC125223 BC125224 BX647193 NM_001243963 NM_020871	607633	-	NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2##GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2##U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2##Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_001145346|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##AK301904|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_001243963|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	0.968035	CTCF.p2:-18:0.893
chr15	83318914	83318980	reg1036488.p2	4.724	+	CU690752 BC050629 NM_030594	-2273	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	-78412	-	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	-109711	-	AK097827 TSC_hg19_v1_chr15_-_83349166	30207	-	AF022152 U37673 TSC_hg19_v1_chr15_-_83378628 BC093739 BC143342 BC143346 BC035640 BC008350 BC026700 AK294331 NM_004644	59665	-	TSC_hg19_v1_chr15_-_83419208 BC041394	100252	-	BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##AK097827|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##AF022152|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##U37673|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC093739|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC143342|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC143346|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC035640|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC008350|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC026700|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##AK294331|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##NM_004644|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit	0.0	
chr16	12750982	12751048	reg1028911.p2	4.724	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-680442	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-691931	+	NM_001130007	-740497	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	146636	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	146704	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	244453	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr16	81547805	81547944	reg1028066.p2	4.724	+	AY172689 NM_030629	-18921	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-69041	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-199224	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	265023	+	TSC_hg19_v1_chr16_+_81812901 AB208914	265028	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	265056	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr1	73089008	73089159	reg1030516.p1	4.724	+	TSC_hg19_v1_chr1_-_72748491 AY358132	-340578	-	TSC_hg19_v1_chr1_-_72748182 AK295481 BX538014 AK092307 AX747470 NM_173808	-340872	-	NM_005455 NM_203350	-1542112	-	AK131476 BC020778 BX647210 TSC_hg19_v1_chr1_-_74663861 NM_001105659	1574765	-	NM_001112808 NM_001199327 NM_001199328 NM_001199329 NM_003838 TSC_hg19_v1_chr1_+_74663927 BC020720 AK294948 AF017445 AK304490 BC032865 AK223254 BC032308 AK299468	1574853	+	NM_015978 AF116826 AK307984 BC113539 BC117262 AY303691 HQ258528	1612019	+	AK295481|NEGR1|257194|neuronal growth regulator 1##BX538014|NEGR1|257194|neuronal growth regulator 1##AK092307|NEGR1|257194|neuronal growth regulator 1##NM_173808|NEGR1|257194|neuronal growth regulator 1##NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK131476|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BC020778|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BX647210|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001105659|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001112808|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199327|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##NM_001199328|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_001199329|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_003838|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC020720|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK294948|FPGT|8790|fucose-1-phosphate guanylyltransferase##AF017445|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK304490|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032865|FPGT-TNNI3K|100526835|FPGT-TNNI3K readthrough##AK223254|FPGT|8790|fucose-1-phosphate guanylyltransferase##BC032308|FPGT|8790|fucose-1-phosphate guanylyltransferase##AK299468|FPGT|8790|fucose-1-phosphate guanylyltransferase##NM_015978|TNNI3K|51086|TNNI3 interacting kinase##AF116826|TNNI3K|51086|TNNI3 interacting kinase##AK307984|TNNI3K|51086|TNNI3 interacting kinase##BC113539|TNNI3K|51086|TNNI3 interacting kinase##BC117262|TNNI3K|51086|TNNI3 interacting kinase##AY303691|TNNI3K|51086|TNNI3 interacting kinase##HQ258528|TNNI3K|51086|TNNI3 interacting kinase	0.988254	CTCF.p2:-6:0.988
chr10	63662284	63662401	reg1026904.p1	4.723	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-911	+	NM_032199	-1330	+	BC041932 NM_173554	-239624	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	146754	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	366197	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	471701	+	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365	0.0	
chr17	54756653	54756750	reg1031731.p1	4.723	+	AK314080 NM_005450 TSC_hg19_v1_chr17_+_54671080	-85632	+	NM_153228 AK095654	-525865	+	TSC_hg19_v1_chr17_+_53828441 AF114430 NM_001102402 AK058120 BC005112	-928101	+	BC093905 BC093907 NM_001085430	136548	-	BC041467 TSC_hg19_v1_chr17_-_54911271	154572	-	TSC_hg19_v1_chr17_+_54911515 NM_003647 BC022297 AK310668 AK293039 U49379	154803	+	AK314080|NOG|9241|noggin##NM_005450|NOG|9241|noggin##NM_153228|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AK095654|ANKFN1|162282|ankyrin-repeat and fibronectin type III domain containing 1##AF114430|PCTP|58488|phosphatidylcholine transfer protein##NM_001102402|PCTP|58488|phosphatidylcholine transfer protein##AK058120|PCTP|58488|phosphatidylcholine transfer protein##BC005112|PCTP|58488|phosphatidylcholine transfer protein##BC093905|C17orf67|339210|chromosome 17 open reading frame 67##BC093907|C17orf67|339210|chromosome 17 open reading frame 67##NM_001085430|C17orf67|339210|chromosome 17 open reading frame 67##BC041467|C17orf67|339210|chromosome 17 open reading frame 67##NM_003647|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##BC022297|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##AK310668|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##AK293039|DGKE|8526|diacylglycerol kinase, epsilon 64kDa##U49379|DGKE|8526|diacylglycerol kinase, epsilon 64kDa	0.744977	CTCF.p2:10:0.745
chr20	6800427	6800523	reg1031345.p2	4.723	+	BC069214 NM_001200	-51731	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-696312	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-696598	-	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	1120627	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	1199825	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	1199932	-	BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4	0.952438	CTCF.p2:-17:0.952
chr5	29698035	29698161	reg1030032.p1	4.723	+	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	-2225695	+	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	-2659427	-	NM_006727	-5053014	-	NM_004932 TSC_hg19_v1_chr5_+_31193792 AK291290	1495698	+	TSC_hg19_v1_chr5_+_31193875 BC000019 AK024238	1495779	+	TSC_hg19_v1_chr5_-_31532201 AK308093 AF189011 BC054003 BX647724 NM_001100412 NM_013235	1834124	-	BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##NM_004932|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK291290|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK308093|DROSHA|29102|drosha, ribonuclease type III##AF189011|DROSHA|29102|drosha, ribonuclease type III##BC054003|DROSHA|29102|drosha, ribonuclease type III##BX647724|DROSHA|29102|drosha, ribonuclease type III##NM_001100412|DROSHA|29102|drosha, ribonuclease type III##NM_013235|DROSHA|29102|drosha, ribonuclease type III	0.895887	CTCF.p2:-6:0.896
chr12	57636882	57636969	reg1018465.p1	4.722	+	BC011910 NM_020142 AK094275	-2425	-	CR457176 AF164796 AK129629 TSC_hg19_v1_chr12_-_57630888	-6046	-	NM_001166358 BX647711 AK301443 TSC_hg19_v1_chr12_+_57623972 BX648847 NM_001166359 NM_001166357 BC004189 BC004215 BC008711 AK296183 AK297173 AK315916	-12937	+	TSC_hg19_v1_chr12_-_57642922 CU675915	6055	-	AK300688 BC008069 AK057013 AK311513 NM_145064	8011	-	TSC_hg19_v1_chr12_-_57674254 X85326	37352	-	BC011910|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##NM_020142|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AK094275|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##CR457176|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AF164796|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AK129629|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##NM_001166358|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX647711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301443|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX648847|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166359|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166357|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK296183|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK297173|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK315916|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK300688|STAC3|246329|SH3 and cysteine rich domain 3##BC008069|STAC3|246329|SH3 and cysteine rich domain 3##AK057013|STAC3|246329|SH3 and cysteine rich domain 3##AK311513|STAC3|246329|SH3 and cysteine rich domain 3##NM_145064|STAC3|246329|SH3 and cysteine rich domain 3	0.970919	CTCF.p2:-6:0.971
chr17	8844796	8844976	reg1027578.p1	4.722	+	AY725853 AF128881 NM_014308	-29070	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-73902	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-142334	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	24095	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	80081	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	634245	-	AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8	0.0	
chr20	38058521	38058633	reg1026626.p1	4.722	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-467588	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-503509	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-503588	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1259300	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1598917	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1599087	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.049228	
chr3	99137772	99137901	reg1029184.p2	4.722	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-517344	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-686249	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-686591	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	219614	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	398909	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	457155	-	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like	0.032579	
chr5	176796236	176796412	reg1030202.p1	4.722	+	TSC_hg19_v1_chr5_+_176794314 AK098150	-2011	+	TSC_hg19_v1_chr5_+_176784947 AB590533	-11339	+	AK123382 NM_006480 TSC_hg19_v1_chr5_+_176784882 BC014094	-11442	+	AK096088 NM_001167579 NM_003052 TSC_hg19_v1_chr5_+_176811434 AK298299 BC053349 BC035294 BC050385 L13258	15118	+	BC132952 BC132954 NM_001029886	31312	-	TSC_hg19_v1_chr5_-_176831183 BT007350	34901	-	AK098150|RGS14|10636|regulator of G-protein signaling 14##AK123382|RGS14|10636|regulator of G-protein signaling 14##NM_006480|RGS14|10636|regulator of G-protein signaling 14##BC014094|RGS14|10636|regulator of G-protein signaling 14##AK096088|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_001167579|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_003052|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK298299|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC053349|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC035294|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC050385|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##L13258|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC132952|PFN3|345456|profilin 3##BC132954|PFN3|345456|profilin 3##NM_001029886|PFN3|345456|profilin 3##BT007350|F12|2161|coagulation factor XII (Hageman factor)	0.0	
chr6	134557139	134557312	reg1030537.p1	4.722	+	TSC_hg19_v1_chr6_-_134498984 FM205708 AK293383 NM_001143677	-58233	-	NM_001143678 AK298688	-60127	-	FM205707 TSC_hg19_v1_chr6_-_134496850	-60364	-	AK055077 NM_001143676	81970	-	TSC_hg19_v1_chr6_+_134758857 AK055166	201623	+	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	714007	-	FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143678|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK298688|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205707|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK055166|LOC154092|154092|uncharacterized LOC154092##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1	0.0	
chr9	92015714	92015895	reg1026982.p2	4.722	+	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-82386	+	TSC_hg19_v1_chr9_+_91926112 NM_001827 X54942 BC006458 AB527990 BT006630 CR407630 CR542118	-89646	+	BC026314 NM_016848 TSC_hg19_v1_chr9_-_91793734	-222094	-	BC054500 NM_001142287 NM_006378	78806	-	BX648216 TSC_hg19_v1_chr9_-_92113005	97203	-	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	204177	+	AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2##X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma	0.0	
chr19	38893426	38893547	reg1010710.p1	4.721	+	BC151136 DQ323927 DQ323928 NM_001039616 NM_001042522	-12598	+	AF538037 AF538035 AF538036 BC035008 NM_152657 AK057356	-14818	-	TSC_hg19_v1_chr19_+_38865427 AK304486 BC001164 BC065006 D38047 AB464081 CU674590 BT019688 AK308809	-27950	+	TSC_hg19_v1_chr19_+_38893785 BC117258 BC143830 BC171747 NM_174905 HQ258606 BC036482	294	+	TSC_hg19_v1_chr19_+_38893817 BC100033	327	+	TSC_hg19_v1_chr19_+_38893839 BC080606 AK128745	415	+	BC151136|SPRED3|399473|sprouty-related, EVH1 domain containing 3##DQ323927|SPRED3|399473|sprouty-related, EVH1 domain containing 3##DQ323928|SPRED3|399473|sprouty-related, EVH1 domain containing 3##NM_001039616|SPRED3|399473|sprouty-related, EVH1 domain containing 3##NM_001042522|SPRED3|399473|sprouty-related, EVH1 domain containing 3##AF538037|GGN|199720|gametogenetin##AF538035|GGN|199720|gametogenetin##AF538036|GGN|199720|gametogenetin##BC035008|GGN|199720|gametogenetin##NM_152657|GGN|199720|gametogenetin##AK057356|GGN|199720|gametogenetin##AK304486|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##BC001164|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##BC065006|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##D38047|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##BT019688|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##AK308809|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##BC117258|FAM98C|147965|family with sequence similarity 98, member C##BC143830|FAM98C|147965|family with sequence similarity 98, member C##BC171747|FAM98C|147965|family with sequence similarity 98, member C##NM_174905|FAM98C|147965|family with sequence similarity 98, member C##HQ258606|FAM98C|147965|family with sequence similarity 98, member C##BC036482|FAM98C|147965|family with sequence similarity 98, member C##BC100033|FAM98C|147965|family with sequence similarity 98, member C##BC080606|FAM98C|147965|family with sequence similarity 98, member C##AK128745|FAM98C|147965|family with sequence similarity 98, member C	0.010312	
chr22	39855537	39855604	reg1036809.p1	4.721	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	-2034	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	-2250	+	TSC_hg19_v1_chr22_+_39795812 AK291668 AK316004 AK308903 AB591024 CU690722	-59759	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	27720	+	TSC_hg19_v1_chr22_+_39898257 NM_019008	42695	+	TSC_hg19_v1_chr22_+_39898332 AL834205	42740	+	BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK291668|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK316004|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK308903|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_019008|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL834205|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like	0.0	
chr3	185721024	185721124	reg1027203.p1	4.721	+	TSC_hg19_v1_chr3_-_185655843 AK315632 NM_001243879 NM_004593	-65196	-	TSC_hg19_v1_chr3_-_185655809 AK098191	-65259	-	TSC_hg19_v1_chr3_-_185655803 BC000451 BC000160 U87836 AK308267	-65284	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	105272	-	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	105782	-	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	358860	-	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC000451|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC000160|TRA2B|6434|transformer 2 beta homolog (Drosophila)##U87836|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK308267|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa	0.024365	
chr3	30793164	30793290	reg1027954.p1	4.721	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-144824	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-145205	+	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	-1470263	+	AL832766 NM_207359	142925	-	TSC_hg19_v1_chr3_+_31574119 AK311488	780903	+	TSC_hg19_v1_chr3_+_31574468 AK074587	781222	+	D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.253672	CTCF.p2:29:0.254
chr10	24511929	24512068	reg1031597.p2	4.720	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	-13904	+	AK091142 AX746804 NM_001098501 NM_019590 TSC_hg19_v1_chr10_+_24497850	-14210	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	-528321	+	TSC_hg19_v1_chr10_+_24755441 AK300422	243446	+	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	243471	+	AK307604 TSC_hg19_v1_chr10_-_25012174	500175	-	AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK091142|KIAA1217|56243|KIAA1217##NM_001098501|KIAA1217|56243|KIAA1217##NM_019590|KIAA1217|56243|KIAA1217##AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217##BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21	0.974049	CTCF.p2:-31:0.974
chr13	92001427	92001607	reg1008143.p2	4.720	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3676648	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5628078	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7545017	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	49387	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1877910	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3130309	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.0	
chr15	51694197	51694335	reg1036880.p1	4.720	+	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	-60472	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	-63502	-	AY517501 NM_207381	-296794	-	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	220707	-	AF453583 NM_001165257 NM_013243 AF078851 TSC_hg19_v1_chr15_+_51973699 AY359093 AK075314 AK296466 AK290175	279365	+	AK129759 DQ892424 DQ895638 TSC_hg19_v1_chr15_-_52029856	335610	-	NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2##AF453583|SCG3|29106|secretogranin III##NM_001165257|SCG3|29106|secretogranin III##NM_013243|SCG3|29106|secretogranin III##AF078851|SCG3|29106|secretogranin III##AY359093|SCG3|29106|secretogranin III##AK075314|SCG3|29106|secretogranin III##AK296466|SCG3|29106|secretogranin III##AK290175|SCG3|29106|secretogranin III##AK129759|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ892424|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ895638|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	0.982047	CTCF.p2:2:0.982
chr4	159939377	159939556	reg1028326.p2	4.720	+	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-249181	+	TSC_hg19_v1_chr4_+_159690177 NM_020840	-249288	+	AB528445 CR542081 DQ891562 DQ894749 TSC_hg19_v1_chr4_-_159644545 BC014893 L11667 BC030707 AK313929 NM_005038	-294938	-	AK058100 NM_152543	16866	-	AK294459 NM_014247	249531	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	3145685	-	AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##NM_020840|FNIP2|57600|folliculin interacting protein 2##CR542081|PPID|5481|peptidylprolyl isomerase D##DQ891562|PPID|5481|peptidylprolyl isomerase D##DQ894749|PPID|5481|peptidylprolyl isomerase D##BC014893|PPID|5481|peptidylprolyl isomerase D##L11667|PPID|5481|peptidylprolyl isomerase D##BC030707|PPID|5481|peptidylprolyl isomerase D##AK313929|PPID|5481|peptidylprolyl isomerase D##NM_005038|PPID|5481|peptidylprolyl isomerase D##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5	0.0	
chr6	53544339	53544474	reg1028981.p2	4.720	+	EF633513 NM_001003760	-13901	-	TSC_hg19_v1_chr6_-_53409900 AK304288 NM_001197115 NM_001498	-134495	-	TSC_hg19_v1_chr6_-_53409836 AK313480	-134571	-	TSC_hg19_v1_chr6_+_53659294 AK021896	114894	+	TSC_hg19_v1_chr6_+_53659776 BC003193 NM_018214	115353	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	115525	+	EF633513|KLHL31|401265|kelch-like 31 (Drosophila)##NM_001003760|KLHL31|401265|kelch-like 31 (Drosophila)##AK304288|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001197115|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001498|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK313480|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK021896|LRRC1|55227|leucine rich repeat containing 1##BC003193|LRRC1|55227|leucine rich repeat containing 1##NM_018214|LRRC1|55227|leucine rich repeat containing 1##AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1	0.216412	CTCF.p2:-12:0.216
chr7	133538668	133538845	reg1029859.p1	4.720	+	TSC_hg19_v1_chr7_+_132937838 NM_001037126 NM_021807 AF380839 AK027688 AL831989 AK298191 BC067263 BC026174 CU693148 AB051486	-600907	+	TSC_hg19_v1_chr7_-_132766851 BC011596 BC014839 AK129533	-771910	-	AB528286 TSC_hg19_v1_chr7_-_132766813 AK294071 AK000427 NM_017812 AK310236	-771992	-	BC104897 BC104899 AK057348 NM_144648	273321	+	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	462867	-	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	463031	-	NM_001037126|EXOC4|60412|exocyst complex component 4##NM_021807|EXOC4|60412|exocyst complex component 4##AF380839|EXOC4|60412|exocyst complex component 4##AK027688|EXOC4|60412|exocyst complex component 4##AL831989|EXOC4|60412|exocyst complex component 4##AK298191|EXOC4|60412|exocyst complex component 4##BC067263|EXOC4|60412|exocyst complex component 4##BC026174|EXOC4|60412|exocyst complex component 4##AB051486|EXOC4|60412|exocyst complex component 4##BC011596|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC014839|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK129533|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK294071|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK000427|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##NM_017812|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK310236|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4	0.692871	CTCF.p2:2:0.646
chr9	34011142	34011261	reg1028811.p1	4.720	+	TSC_hg19_v1_chr9_+_33817704 AJ240087 CR457233	-193529	+	TSC_hg19_v1_chr9_+_33817325 BC047584 AK000426 BC004862 AK225880	-193807	+	TSC_hg19_v1_chr9_+_33817170 NM_017811	-194017	+	AB209911 TSC_hg19_v1_chr9_-_34048886 AK302754 AK294952 AK299183 AK303493 CR933678	37676	-	TSC_hg19_v1_chr9_-_34048895 BC111409 AK302335 NM_018449	37715	-	AK000354 AK292935 TSC_hg19_v1_chr9_-_34126623	115385	-	AJ240087|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##CR457233|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC047584|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK000426|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC004862|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK225880|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AB209911|UBAP2|55833|ubiquitin associated protein 2##AK302754|UBAP2|55833|ubiquitin associated protein 2##AK294952|UBAP2|55833|ubiquitin associated protein 2##AK299183|UBAP2|55833|ubiquitin associated protein 2##AK303493|UBAP2|55833|ubiquitin associated protein 2##CR933678|UBAP2|55833|ubiquitin associated protein 2##BC111409|UBAP2|55833|ubiquitin associated protein 2##AK302335|UBAP2|55833|ubiquitin associated protein 2##NM_018449|UBAP2|55833|ubiquitin associated protein 2##AK000354|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK292935|DCAF12|25853|DDB1 and CUL4 associated factor 12	0.259649	CTCF.p2:-23:0.260
chr10	131959174	131959279	reg1031305.p1	4.719	+	TSC_hg19_v1_chr10_+_131934681 AJ010841 AB463691	-24511	+	TSC_hg19_v1_chr10_+_131934675 AF118649 AK225609	-24551	+	TSC_hg19_v1_chr10_+_131934662 NM_001199868 NM_006541 BC005289 AK022131 AF118652	-24571	+	TSC_hg19_v1_chr10_-_133109808 BC093639 BC101535	1150594	-	BC042951 NM_174937 TSC_hg19_v1_chr10_-_133110013	1150775	-	CU692440 AB528671 U15174 BC009342 BC080643 TSC_hg19_v1_chr10_-_133795428 AK222626 AK295136 BC021989 AF002697 NM_004052	1836150	-	AJ010841|GLRX3|10539|glutaredoxin 3##AF118649|GLRX3|10539|glutaredoxin 3##AK225609|GLRX3|10539|glutaredoxin 3##NM_001199868|GLRX3|10539|glutaredoxin 3##NM_006541|GLRX3|10539|glutaredoxin 3##BC005289|GLRX3|10539|glutaredoxin 3##AK022131|GLRX3|10539|glutaredoxin 3##AF118652|GLRX3|10539|glutaredoxin 3##BC093639|TCERG1L|256536|transcription elongation regulator 1-like##BC101535|TCERG1L|256536|transcription elongation regulator 1-like##BC042951|TCERG1L|256536|transcription elongation regulator 1-like##NM_174937|TCERG1L|256536|transcription elongation regulator 1-like##U15174|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC009342|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC080643|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK222626|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK295136|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC021989|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AF002697|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_004052|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3	0.312507	CTCF.p2:-7:0.313
chr10	50184392	50184506	reg1028135.p2	4.719	+	NM_001006939 BC036722	-62169	-	AK127650 NM_020945	-290934	+	TSC_hg19_v1_chr10_+_49892917 BC034937	-291559	+	TSC_hg19_v1_chr10_-_50323537 BC041414 AK297931 AK056299 NM_001031746 NM_144984	139074	-	BC029839 BC047597 NM_001164484	157609	-	DQ884399 TSC_hg19_v1_chr10_-_50396437 BC047724 BC104438 BC104439 NM_001010863 BC037922 BC042857 AK303891	211977	-	NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18##AK127650|WDFY4|57705|WDFY family member 4##NM_020945|WDFY4|57705|WDFY family member 4##BC034937|WDFY4|57705|WDFY family member 4##BC041414|VSTM4|196740|V-set and transmembrane domain containing 4##AK297931|VSTM4|196740|V-set and transmembrane domain containing 4##AK056299|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001031746|VSTM4|196740|V-set and transmembrane domain containing 4##NM_144984|VSTM4|196740|V-set and transmembrane domain containing 4##BC029839|FAM170B|170370|family with sequence similarity 170, member B##BC047597|FAM170B|170370|family with sequence similarity 170, member B##NM_001164484|FAM170B|170370|family with sequence similarity 170, member B##DQ884399|C10orf128|170371|chromosome 10 open reading frame 128##BC047724|C10orf128|170371|chromosome 10 open reading frame 128##BC104438|C10orf128|170371|chromosome 10 open reading frame 128##BC104439|C10orf128|170371|chromosome 10 open reading frame 128##NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128##BC037922|C10orf128|170371|chromosome 10 open reading frame 128##BC042857|C10orf128|170371|chromosome 10 open reading frame 128	0.970424	CTCF.p2:-4:0.970
chr11	114633292	114633389	reg1028065.p1	4.719	+	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-84092	+	AK000134 AK225236 TSC_hg19_v1_chr11_-_114466485 NM_001077639 NM_017678	-166862	-	AY358805 TSC_hg19_v1_chr11_-_114466403	-166935	-	AY309502 TSC_hg19_v1_chr11_-_115088658	455308	-	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	741840	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	2010358	-	NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##AK000134|FAM55D|54827|family with sequence similarity 55, member D##AK225236|FAM55D|54827|family with sequence similarity 55, member D##NM_001077639|FAM55D|54827|family with sequence similarity 55, member D##NM_017678|FAM55D|54827|family with sequence similarity 55, member D##AY358805|FAM55D|54827|family with sequence similarity 55, member D##AY309502|CADM1|23705|cell adhesion molecule 1##AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)	0.336767	CTCF.p2:5:0.236
chr12	32049499	32049679	reg1024397.p1	4.719	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	-104385	-	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	-167533	-	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	-167615	-	TSC_hg19_v1_chr12_+_32112348 NM_018169	62742	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	62805	+	TSC_hg19_v1_chr12_+_32259750 BC010091	210125	+	BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)	0.0	
chr1	90406344	90406456	reg1036486.p1	4.719	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-118836	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-118942	+	TSC_hg19_v1_chr1_+_90286603 AK092238 AX747423	-119801	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	54316	+	BC126439 BC126441 AY338397 NM_020063	776385	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	1080638	-	BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##AK092238|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644	0.0	
chr3	100369747	100369864	reg1023273.p1	4.719	+	NM_032787 AK027360	-41367	+	BC040355 TSC_hg19_v1_chr3_+_100238088	-131730	+	TSC_hg19_v1_chr3_+_100211558 AK129789	-158222	+	NM_001007565 NM_001195479 NM_006070 TSC_hg19_v1_chr3_+_100428337 AK093456 BC009241	58440	+	TSC_hg19_v1_chr3_+_100428385 BC001483 NM_001195478	58568	+	TSC_hg19_v1_chr3_+_100428396 BC041600 BC023599	58659	+	NM_032787|GPR128|84873|G protein-coupled receptor 128##AK027360|GPR128|84873|G protein-coupled receptor 128##BC040355|TMEM45A|55076|transmembrane protein 45A##AK129789|TMEM45A|55076|transmembrane protein 45A##NM_001007565|TFG|10342|TRK-fused gene##NM_001195479|TFG|10342|TRK-fused gene##NM_006070|TFG|10342|TRK-fused gene##AK093456|TFG|10342|TRK-fused gene##BC009241|TFG|10342|TRK-fused gene##BC001483|TFG|10342|TRK-fused gene##NM_001195478|TFG|10342|TRK-fused gene##BC041600|TFG|10342|TRK-fused gene##BC023599|TFG|10342|TRK-fused gene	0.0	
chr4	48143137	48143253	reg1029866.p1	4.719	+	BC017829 L27071 NM_003328	-6937	-	TSC_hg19_v1_chr4_+_48018788 BC067881 CR749484 NM_207330 AK095299	-124392	+	X64802 TSC_hg19_v1_chr4_-_48018662	-124558	-	BC101711 BC101713 BC143487 NM_003215 TSC_hg19_v1_chr4_-_48271858	128640	-	BC040993 TSC_hg19_v1_chr4_+_48343485 AK291006	200216	+	TSC_hg19_v1_chr4_+_48343571 BC006139 BC007701 BC012067 NM_020846 AB040891	200418	+	BC017829|TXK|7294|TXK tyrosine kinase##L27071|TXK|7294|TXK tyrosine kinase##NM_003328|TXK|7294|TXK tyrosine kinase##BC067881|NIPAL1|152519|NIPA-like domain containing 1##CR749484|NIPAL1|152519|NIPA-like domain containing 1##NM_207330|NIPAL1|152519|NIPA-like domain containing 1##AK095299|NIPAL1|152519|NIPA-like domain containing 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1##BC101711|TEC|7006|tec protein tyrosine kinase##BC101713|TEC|7006|tec protein tyrosine kinase##BC143487|TEC|7006|tec protein tyrosine kinase##NM_003215|TEC|7006|tec protein tyrosine kinase##BC040993|SLAIN2|57606|SLAIN motif family, member 2##AK291006|SLAIN2|57606|SLAIN motif family, member 2##BC006139|SLAIN2|57606|SLAIN motif family, member 2##BC007701|SLAIN2|57606|SLAIN motif family, member 2##BC012067|SLAIN2|57606|SLAIN motif family, member 2##NM_020846|SLAIN2|57606|SLAIN motif family, member 2##AB040891|SLAIN2|57606|SLAIN motif family, member 2	0.990152	CTCF.p2:15:0.990
chr10	31757319	31757420	reg1027882.p1	4.718	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-147280	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-149236	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-149412	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	460355	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	460416	-	TSC_hg19_v1_chr10_-_32344938 AB462413	587563	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.362394	CTCF.p2:-74:0.321
chr15	84703717	84703843	reg1016979.p1	4.718	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-380953	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-587552	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-587720	+	NM_001243531	137461	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	440501	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	493692	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.960288	CTCF.p2:-6:0.960
chr18	68157714	68157845	reg1034566.p1	4.718	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-201518	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-201612	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-284841	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	2052996	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	2053951	-	AF448839 NM_138999	2375154	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.999929	CTCF.p2:-5:1.000
chr4	4092578	4092678	reg1028280.p1	4.718	+	BC044637 TSC_hg19_v1_chr4_-_3957162	-135473	-	J03853 NM_000683	-324333	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-324510	+	BC130430 BC130432 NM_177998	135989	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	157320	-	TSC_hg19_v1_chr4_-_4291782 AL136750 NM_001145725	199139	-	BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128##AL136750|LYAR|55646|Ly1 antibody reactive homolog (mouse)##NM_001145725|LYAR|55646|Ly1 antibody reactive homolog (mouse)	0.0	
chr12	113513254	113513435	reg1024998.p2	4.717	+	NM_004416 BC048216	-17654	+	TSC_hg19_v1_chr12_+_113416323 NM_001032731 NM_002535 NM_016817 BC010625 BC053870 BC023637 AK292906 BC069052 BC049215 AK292796 M87284 M87434 AB590925 CU690608	-97004	+	AF063613 TSC_hg19_v1_chr12_+_113376306	-137004	+	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	60068	-	AF086713 AB208935 AK294350 NM_001193520 NM_004658	60687	-	AK308987 NM_001144872	74260	+	NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)##BC048216|DTX1|1840|deltex homolog 1 (Drosophila)##NM_001032731|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_002535|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_016817|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC010625|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC053870|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC023637|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292906|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC069052|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC049215|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292796|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87284|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87434|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AF063613|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001144872|CCDC42B|387885|coiled-coil domain containing 42B	0.0	
chr17	75437551	75437731	reg1026533.p1	4.717	+	AB023208 NM_001113494 AJ312322	-65472	+	TSC_hg19_v1_chr17_+_75369418 AK304143	-68216	+	TSC_hg19_v1_chr17_+_75369236 AJ312319 NM_001113493	-68388	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	9004	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	9141	+	AK299828 TSC_hg19_v1_chr17_+_75447450	9748	+	AB023208|SEPT9|10801|septin 9##NM_001113494|SEPT9|10801|septin 9##AJ312322|SEPT9|10801|septin 9##AK304143|SEPT9|10801|septin 9##AJ312319|SEPT9|10801|septin 9##NM_001113493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9	0.0	
chr17	80279186	80279366	reg1007986.p1	4.717	+	BT006696 DQ890740 DQ892590 DQ893911 DQ895810 AK298096 AK310061 BC009293 BC013297 X06180 AK223465 AY935534 AY935535 AY935536 AY935537 AK310558 NM_006137	-3852	-	TSC_hg19_v1_chr17_-_80231580 BC003558 BC015775 AK291758 AK295638 AK303365 NM_001893 NM_139062	-47696	-	TSC_hg19_v1_chr17_-_80231315 AB091044 AK296969	-47983	-	TSC_hg19_v1_chr17_-_80291610 AK223068 BC017716	12337	-	AK312980 U77643 TSC_hg19_v1_chr17_-_80291643 AK223104	12370	-	TSC_hg19_v1_chr17_-_80291859 AK290708	12570	-	BT006696|CD7|924|CD7 molecule##DQ890740|CD7|924|CD7 molecule##DQ892590|CD7|924|CD7 molecule##DQ893911|CD7|924|CD7 molecule##DQ895810|CD7|924|CD7 molecule##AK298096|CD7|924|CD7 molecule##AK310061|CD7|924|CD7 molecule##BC009293|CD7|924|CD7 molecule##BC013297|CD7|924|CD7 molecule##X06180|CD7|924|CD7 molecule##AK223465|CD7|924|CD7 molecule##AY935534|CD7|924|CD7 molecule##AY935535|CD7|924|CD7 molecule##AY935536|CD7|924|CD7 molecule##AY935537|CD7|924|CD7 molecule##AK310558|CD7|924|CD7 molecule##NM_006137|CD7|924|CD7 molecule##BC003558|CSNK1D|1453|casein kinase 1, delta##BC015775|CSNK1D|1453|casein kinase 1, delta##AK291758|CSNK1D|1453|casein kinase 1, delta##AK295638|CSNK1D|1453|casein kinase 1, delta##AK303365|CSNK1D|1453|casein kinase 1, delta##NM_001893|CSNK1D|1453|casein kinase 1, delta##NM_139062|CSNK1D|1453|casein kinase 1, delta##AB091044|CSNK1D|1453|casein kinase 1, delta##AK296969|CSNK1D|1453|casein kinase 1, delta##AK223068|SECTM1|6398|secreted and transmembrane 1##BC017716|SECTM1|6398|secreted and transmembrane 1##AK312980|SECTM1|6398|secreted and transmembrane 1##U77643|SECTM1|6398|secreted and transmembrane 1##AK223104|SECTM1|6398|secreted and transmembrane 1##AK290708|SECTM1|6398|secreted and transmembrane 1	0.0	
chr18	43245338	43245518	reg1003607.p2	4.717	+	AF349446 NM_007163	-50663	+	NM_001242692 AK292422	-452476	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-984560	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	58676	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	58729	+	NM_001146037	61489	+	AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.0	
chr3	196230093	196230274	reg1030138.p1	4.717	+	TSC_hg19_v1_chr3_-_196159304 NM_015562	-70850	-	TSC_hg19_v1_chr3_-_196159299 AK026451 AK129880 AK303630 AK308699 AK307899	-70884	-	AB018337 TSC_hg19_v1_chr3_-_196159295 BC047420	-70900	-	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	395	-	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	12030	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	65207	-	NM_015562|UBXN7|26043|UBX domain protein 7##AK026451|UBXN7|26043|UBX domain protein 7##AK129880|UBXN7|26043|UBX domain protein 7##AK303630|UBXN7|26043|UBX domain protein 7##AK308699|UBXN7|26043|UBX domain protein 7##AK307899|UBXN7|26043|UBX domain protein 7##AB018337|UBXN7|26043|UBX domain protein 7##BC047420|UBXN7|26043|UBX domain protein 7##BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53	0.0	
chr9	131755373	131755516	reg1031462.p2	4.717	+	TSC_hg19_v1_chr9_+_131709992 BX537774 D79991	-45433	+	TSC_hg19_v1_chr9_+_131709977 NM_015354	-45464	+	TSC_hg19_v1_chr9_-_131709833 AK300180 BC035556 AY358759 AK225402 AB029017 NM_014908	-45547	-	EU832345 EU832430 TSC_hg19_v1_chr9_-_131790591 AF257319 AF258589 AB058751 BC014635 NM_020145	35088	-	TSC_hg19_v1_chr9_+_131798900 AK074127 AK075421 AK301241	43486	+	AK303036 BC009114 NM_032809	43788	+	BX537774|NUP188|23511|nucleoporin 188kDa##D79991|NUP188|23511|nucleoporin 188kDa##NM_015354|NUP188|23511|nucleoporin 188kDa##AK300180|DOLK|22845|dolichol kinase##BC035556|DOLK|22845|dolichol kinase##AY358759|DOLK|22845|dolichol kinase##AB029017|DOLK|22845|dolichol kinase##NM_014908|DOLK|22845|dolichol kinase##EU832345|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##EU832430|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##AF257319|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##AF258589|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##AB058751|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##BC014635|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##NM_020145|SH3GLB2|56904|SH3-domain GRB2-like endophilin B2##AK074127|FAM73B|84895|family with sequence similarity 73, member B##AK075421|FAM73B|84895|family with sequence similarity 73, member B##AK301241|FAM73B|84895|family with sequence similarity 73, member B##AK303036|FAM73B|84895|family with sequence similarity 73, member B##BC009114|FAM73B|84895|family with sequence similarity 73, member B##NM_032809|FAM73B|84895|family with sequence similarity 73, member B	0.947466	CTCF.p2:30:0.931
chrX	13823477	13823604	reg1027839.p1	4.717	+	TSC_hg19_v1_chrX_+_13752969 BC052809 BC096344 BC096345 BC099658 BC099659 BC092448 GU727634	-70495	+	AK225847 BC042830 TSC_hg19_v1_chrX_+_13752900	-70640	+	TSC_hg19_v1_chrX_+_13752866 NM_003611 AK290354 AK289677 BC012324 BC030787 BC062432 Y15164 Y16355	-70706	+	AM392527 AM392754 AM392867 AM392943 AM392957 AM392968 AM392974 AM393048 AM393215 AM393570 AM393576 AM393741 AM393770 AM393783 AM393822 AB528141 DQ891541 DQ894729 EU832134 EU832227 CU690388 BC008151 TSC_hg19_v1_chrX_-_13835171	11551	-	AK299675 BC047295 TSC_hg19_v1_chrX_-_13835202	11655	-	TSC_hg19_v1_chrX_-_13835213 AK095657	11682	-	BC052809|OFD1|8481|oral-facial-digital syndrome 1##BC096344|OFD1|8481|oral-facial-digital syndrome 1##BC096345|OFD1|8481|oral-facial-digital syndrome 1##BC099658|OFD1|8481|oral-facial-digital syndrome 1##BC099659|OFD1|8481|oral-facial-digital syndrome 1##BC092448|OFD1|8481|oral-facial-digital syndrome 1##GU727634|OFD1|8481|oral-facial-digital syndrome 1##AK225847|OFD1|8481|oral-facial-digital syndrome 1##BC042830|OFD1|8481|oral-facial-digital syndrome 1##NM_003611|OFD1|8481|oral-facial-digital syndrome 1##AK290354|OFD1|8481|oral-facial-digital syndrome 1##AK289677|OFD1|8481|oral-facial-digital syndrome 1##BC012324|OFD1|8481|oral-facial-digital syndrome 1##BC030787|OFD1|8481|oral-facial-digital syndrome 1##BC062432|OFD1|8481|oral-facial-digital syndrome 1##Y15164|OFD1|8481|oral-facial-digital syndrome 1##Y16355|OFD1|8481|oral-facial-digital syndrome 1##AM392527|GPM6B|2824|glycoprotein M6B##AM392754|GPM6B|2824|glycoprotein M6B##AM392867|GPM6B|2824|glycoprotein M6B##AM392943|GPM6B|2824|glycoprotein M6B##AM392957|GPM6B|2824|glycoprotein M6B##AM392968|GPM6B|2824|glycoprotein M6B##AM392974|GPM6B|2824|glycoprotein M6B##AM393048|GPM6B|2824|glycoprotein M6B##AM393215|GPM6B|2824|glycoprotein M6B##AM393570|GPM6B|2824|glycoprotein M6B##AM393576|GPM6B|2824|glycoprotein M6B##AM393741|GPM6B|2824|glycoprotein M6B##AM393770|GPM6B|2824|glycoprotein M6B##AM393783|GPM6B|2824|glycoprotein M6B##AM393822|GPM6B|2824|glycoprotein M6B##DQ891541|GPM6B|2824|glycoprotein M6B##DQ894729|GPM6B|2824|glycoprotein M6B##EU832134|GPM6B|2824|glycoprotein M6B##EU832227|GPM6B|2824|glycoprotein M6B##BC008151|GPM6B|2824|glycoprotein M6B##AK299675|GPM6B|2824|glycoprotein M6B##BC047295|GPM6B|2824|glycoprotein M6B##AK095657|GPM6B|2824|glycoprotein M6B	0.0	
chrX	72482941	72483079	reg1029471.p1	4.717	+	AK291297 AK303676 TSC_hg19_v1_chrX_-_72434669 AB027013 AK316569 NM_021963	-48322	-	TSC_hg19_v1_chrX_-_72434656 AF136178	-48353	-	TSC_hg19_v1_chrX_-_72434633 BC026325	-48382	-	BC128233 NM_005193	184079	+	TSC_hg19_v1_chrX_+_72782961 AK295903 NM_001039840	299962	+	TSC_hg19_v1_chrX_+_72783043 CR936642 BC127727 BC127728 BC136691 BC136692	300045	+	AK291297|NAP1L2|4674|nucleosome assembly protein 1-like 2##AK303676|NAP1L2|4674|nucleosome assembly protein 1-like 2##AB027013|NAP1L2|4674|nucleosome assembly protein 1-like 2##AK316569|NAP1L2|4674|nucleosome assembly protein 1-like 2##NM_021963|NAP1L2|4674|nucleosome assembly protein 1-like 2##AF136178|NAP1L2|4674|nucleosome assembly protein 1-like 2##BC026325|NAP1L2|4674|nucleosome assembly protein 1-like 2##BC128233|CDX4|1046|caudal type homeobox 4##NM_005193|CDX4|1046|caudal type homeobox 4##AK295903|CHIC1|53344|cysteine-rich hydrophobic domain 1##NM_001039840|CHIC1|53344|cysteine-rich hydrophobic domain 1##CR936642|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC127727|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC127728|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC136691|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC136692|CHIC1|53344|cysteine-rich hydrophobic domain 1	1.032681	CTCF.p2:35:0.951
chr12	84221812	84221919	reg1027308.p1	4.716	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	-1140604	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	-1140948	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	-1141165	+	AK291207 AK022853 TSC_hg19_v1_chr12_-_85306547	1084678	-	TSC_hg19_v1_chr12_-_85306575 BC022253 BC070040	1084707	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	1084727	-	AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK291207|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK022853|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC022253|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC070040|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15	0.01381	
chr1	28499376	28499520	reg1026245.p2	4.716	+	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-84324	-	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-212930	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-237887	+	NM_000952 NM_001164723	4006	-	S52624 AK292053 NM_001164721 NM_001164722	20964	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	60083	-	BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8	0.0	
chr1	5346474	5346555	reg1029266.p2	4.716	+	AY282806 NM_001042478 NM_018836	-631410	+	TSC_hg19_v1_chr1_+_4714668 AF175409	-631785	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-1529669	-	NM_001199861	705843	+	TSC_hg19_v1_chr1_-_6052456 AY118228	705931	-	TSC_hg19_v1_chr1_-_6052507 AK124074 AK314326 AF537130 BC040520 NM_015102	705995	-	AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##AF175409|AJAP1|55966|adherens junctions associated protein 1##BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AY118228|NPHP4|261734|nephronophthisis 4##AK124074|NPHP4|261734|nephronophthisis 4##AK314326|NPHP4|261734|nephronophthisis 4##AF537130|NPHP4|261734|nephronophthisis 4##BC040520|NPHP4|261734|nephronophthisis 4##NM_015102|NPHP4|261734|nephronophthisis 4	0.998317	CTCF.p2:-1:0.998
chr3	140950549	140950640	reg1026944.p2	4.716	+	AF403029 BC008324 NM_080862 AK056367	-179837	+	TSC_hg19_v1_chr3_+_140770412 BC051354	-180116	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	-289827	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	92	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	92462	+	TSC_hg19_v1_chr3_+_141087345 AK311501	136763	+	AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38	0.850549	CTCF.p2:19:0.851
chr3	9542340	9542458	reg1029477.p1	4.716	+	TSC_hg19_v1_chr3_+_9476522 AB384632	-65883	+	TSC_hg19_v1_chr3_+_9439556 AK092046 AX747332	-102825	+	TSC_hg19_v1_chr3_+_9439298 NM_001080517	-103038	+	BC113964 AY278320 NM_198560 TSC_hg19_v1_chr3_-_9595497	53064	-	NM_001077525 NM_001077526 NM_022485 TSC_hg19_v1_chr3_+_9691161 AK074792 AF289603 BC025952	148743	+	TSC_hg19_v1_chr3_+_9691188 AK295891 BC050626 AK298846 AL713695	148790	+	AK092046|SETD5|55209|SET domain containing 5##NM_001080517|SETD5|55209|SET domain containing 5##BC113964|LHFPL4|375323|lipoma HMGIC fusion partner-like 4##AY278320|LHFPL4|375323|lipoma HMGIC fusion partner-like 4##NM_198560|LHFPL4|375323|lipoma HMGIC fusion partner-like 4##NM_001077525|MTMR14|64419|myotubularin related protein 14##NM_001077526|MTMR14|64419|myotubularin related protein 14##NM_022485|MTMR14|64419|myotubularin related protein 14##AK074792|MTMR14|64419|myotubularin related protein 14##AF289603|MTMR14|64419|myotubularin related protein 14##BC025952|MTMR14|64419|myotubularin related protein 14##AK295891|MTMR14|64419|myotubularin related protein 14##BC050626|MTMR14|64419|myotubularin related protein 14##AK298846|MTMR14|64419|myotubularin related protein 14##AL713695|MTMR14|64419|myotubularin related protein 14	0.989307	CTCF.p2:-1:0.989
chr5	156263071	156263206	reg1026683.p1	4.716	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	-508965	+	BX537948 NM_000337 NM_001128209 NM_172244	-509378	+	NM_001099293 AK302388	-1869852	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	127097	-	BC013325 TSC_hg19_v1_chr5_-_156485247	222045	-	TSC_hg19_v1_chr5_-_156485459 NM_001099414 NM_012206	222327	-	BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC013325|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_001099414|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_012206|HAVCR1|26762|hepatitis A virus cellular receptor 1	0.461133	CTCF.p2:5:0.461
chr6	139305612	139305732	reg1025685.p1	4.716	+	NM_001077706 NM_001195037	-188425	+	AK092592 AX747618 NM_001242740	-210871	-	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	-210882	+	BC021211 TSC_hg19_v1_chr6_-_139309122 AB209143	3405	-	TSC_hg19_v1_chr6_-_139309357 BC035286 AK312938	3676	-	TSC_hg19_v1_chr6_-_139309391 BC012764 NM_001128617 NM_031922	3738	-	NM_001077706|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##NM_001195037|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##AK092592|LOC100507462|100507462|uncharacterized LOC100507462##NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A##BC021211|REPS1|85021|RALBP1 associated Eps domain containing 1##AB209143|REPS1|85021|RALBP1 associated Eps domain containing 1##BC035286|REPS1|85021|RALBP1 associated Eps domain containing 1##AK312938|REPS1|85021|RALBP1 associated Eps domain containing 1##BC012764|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_001128617|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_031922|REPS1|85021|RALBP1 associated Eps domain containing 1	0.740426	CTCF.p2:-1:0.740
chr6_mcf_hap5	1891222	1891326	reg1031139.p1	4.716	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.95208	CTCF.p2:-9:0.952
chr10	102488961	102489081	reg1031065.p1	4.715	+	TSC_hg19_v1_chr10_+_102295705 AF395830 BC007719 AB528628 DQ892767 DQ896013	-193263	+	TSC_hg19_v1_chr10_+_102295696 AK295353 NM_017902 AK000622	-193386	+	AF077028 AK293081 AK304277 TSC_hg19_v1_chr10_-_102289637 AF115968 AL080056 NM_005004 AK295867	-199385	-	TSC_hg19_v1_chr10_+_102505338 L25597 M89470 NM_000278 NM_003987 NM_003988 NM_003989 NM_003990	16381	+	AF460991 AF460992 NM_001136123 NM_001243770 NM_018121	183304	+	TSC_hg19_v1_chr10_+_102672719 AK292565 AL832343 AL833126 BC015131 BC047715 BC030565 BC064526 BC020915 BC073832 AL832383 AB385255	183754	+	AF395830|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##BC007719|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ892767|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ896013|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK295353|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##NM_017902|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK000622|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AF077028|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AF115968|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##AL080056|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##NM_005004|NDUFB8|4714|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, 19kDa##L25597|PAX2|5076|paired box 2##M89470|PAX2|5076|paired box 2##NM_000278|PAX2|5076|paired box 2##NM_003987|PAX2|5076|paired box 2##NM_003988|PAX2|5076|paired box 2##NM_003989|PAX2|5076|paired box 2##NM_003990|PAX2|5076|paired box 2##AF460991|FAM178A|55719|family with sequence similarity 178, member A##AF460992|FAM178A|55719|family with sequence similarity 178, member A##NM_001136123|FAM178A|55719|family with sequence similarity 178, member A##NM_001243770|FAM178A|55719|family with sequence similarity 178, member A##NM_018121|FAM178A|55719|family with sequence similarity 178, member A##AK292565|FAM178A|55719|family with sequence similarity 178, member A##AL832343|FAM178A|55719|family with sequence similarity 178, member A##AL833126|FAM178A|55719|family with sequence similarity 178, member A##BC015131|FAM178A|55719|family with sequence similarity 178, member A##BC047715|FAM178A|55719|family with sequence similarity 178, member A##BC030565|FAM178A|55719|family with sequence similarity 178, member A##BC064526|FAM178A|55719|family with sequence similarity 178, member A##BC020915|FAM178A|55719|family with sequence similarity 178, member A##BC073832|FAM178A|55719|family with sequence similarity 178, member A##AL832383|FAM178A|55719|family with sequence similarity 178, member A	0.022056	
chr14	106898876	106899038	reg1031625.p2	4.715	+	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 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AK130589 AK130611 BC016369 BX538077 BX648082 BX648874 Z14195 AK095222 AK303185	-21050	-	AF460708 AF460709 AF460785 AY003807 AY003817 DQ454548 M33859 M33860 DQ454427 DQ454852 DQ454425 DQ454627 DQ454856 GU552743 DQ454416 DQ454458 GQ232904 GU552731 GU552736 AY003787 AF017463 GU552721 GU552724 GU552725 GU552726 GU552727 GU552728 GU552729 GU552730 AY003850 DQ454418 DQ454671 GQ232774 DQ454432 DQ454433 DQ454901 DQ454979 DQ454980 GQ232865 HM995239 JF810276 AY003855 DQ454422 DQ454434 DQ454622 DQ454870 DQ523887 HM116153 HM116169 HM116182 Z30552 Z30557 Z30561 Z30562 Z30573 Z30576 Z30578 Z30580 Z30581 Z30591 Z30599 Z30674 Z30675 Z30677 DQ454531 DQ454860 DQ454903 EU099089 AF004937 AY003796 AY003804 DQ454392 DQ454610 DQ454833 EU620002 FJ840008 FJ840011 FJ840012 FJ840020 FJ840055 FJ874002 FJ874054 FJ874065 FJ874072 FJ874075 FJ874095 HM116113 HM116114 HM116155 HM116159 HM116160 HM116168 HM116177 HM116195 HM116199 HM116226 AF017459 AF017460 EU619988 AJ487490 AY003825 AJ253061 EU350428 DQ454982 X75022 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AY671766 AY671767 AY671769 AY671771 AY671776 AY671781 AY671784 AY885181 AY941889 AY941914 AY941957 DQ005274 DQ005285 DQ100660 DQ100674 DQ100703 DQ100725 DQ100792 DQ100829 DQ100832 DQ100964 DQ926158 DQ926198 DQ926208 DQ926421 DQ926458 DQ926468 DQ926470 DQ926478 DQ926497 DQ926599 DQ926603 EF544907 EF544958 EF544959 EF544973 FJ208782 FJ492903 FJ492909 FJ492910 GU570373 HM152498 HM152511 HM152516 HQ392880 HQ689741 L12192 L23518 L23934 L25293 M26998 M74468 S64473 S66098 S67110 U00497 U00556 U22391 U71103 U89766 U97246 X56592 X87440 Z35492 Z46269 Z46271 Z46272 Z46273 Z46275 Z46277 Z46279 Z46282 Z46304 Z46305 Z46306 Z46307 Z46308 Z46340 Z46341 Z46342 Z49135 Z49140 Z49141 Z49143 Z70604 Z70605 Z70610 Z70616 Z70617 Z70625 Z70626 Z70627 Z70637 Z70638 Z70639 Z70640 Z70641 Z70642 Z70643 Z70644 Z70650 Z74665 Z74695 AY670806 AY670808 AY957532 AY686937 AY957534 DQ535279 DQ535294 DQ535296 DQ535314 DQ535320 DQ535326 DQ535459 EF178028 EF178136 HM996258 M84508 FJ039792 M84512 X54441 AY671298 AY670999 AY671028 AF283780 AF283781 M74018 M74021 AY670983 AY670985 AY670987 AY670989 AY670992 AY670993 AY670995 AY670997 AY670998 AY671018 AY671025 AY671033 AY671043 AY671307 AY671310 AY671046 AY671049 AY671205 AF283784 AY671151 AY671233 AJ579207 AY670982 AY671003 AY671029 AY671050 AY671156 AY671160 AY671171 AY671177 AY671190 AY671199 AY671201 AY671212 AY671226 AY671232 AY671235 AY671236 AY671250 AY671251 AY671261 AY671262 AY671270 AY671272 AY671278 AY671281 AY671287 AY671308 Z47229 AF062101 AF062146 AF062152 AF062158 AF062173 AF062181 AF062183 AF062187 AF062192 AF062196 AF062217 AF062218 AF062250 AJ579203 AY204755 AY204757 AY204759 AY204761 AY671006 AY671008 AY671061 AY671064 AY671168 AY671175 AY671183 AY671200 AY671207 AY671220 AY671238 AY671258 AY671268 AY671275 AY671289 AY671290 AY671303 AY671305 AY671696 AY671705 AY671713 AY671722 AY671727 AY671728 S59161 X64152 X64153 X65904 Z47228 Z47234 Z47241 Z75362 Z75374 Z75376 Z75379 Z75386 Z75389 Z75392 Z75394 Z75398 CU674902 CU678316 BC002963 BC073767 CU675962 BC017356 BC019235 BC001872 BC006180 BX538126 AK301454 TSC_hg19_v1_chr14_-_106830060 AK126280 AK128649 AK127921 CR933690	-69051	-	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 AF044420 AF044422 AF044425 AF044427 AF044442 AF090355 AF099201 AF174074 AF471431 AJ132850 AJ271549 AJ300787 AJ300793 AJ300798 AJ300803 AJ308463 AJ633622 AJ633623 AY028777 AY033265 AY033266 AY033267 AY530317 AY554176 AY640472 AY640475 AY640477 AY640483 AY640501 AY640511 AY640535 AY640539 AY640541 AY640544 AY640549 AY640550 AY640557 AY640558 AY640561 AY640568 AY640569 AY640573 AY640577 AY685306 AY781859 AY846266 AY846267 AY866744 AY941844 AY941856 AY941857 AY941860 AY941863 AY941865 AY941866 AY941868 AY941892 AY941896 AY941898 AY941901 AY941907 AY941913 AY941935 AY941942 AY941950 AY941953 AY941968 AY941970 AY941982 AY941983 AY941985 AY941986 AY941988 AY941989 AY944708 AY944716 AY971015 AY971027 AY971037 AY971078 AY971081 AY971115 AY971120 AY971130 AY971135 DQ065629 DQ065669 DQ065674 DQ065689 DQ065692 DQ065718 DQ065725 DQ431499 DQ431621 DQ431627 DQ840705 DQ840715 DQ840744 DQ926087 DQ926091 DQ926150 DQ926207 DQ926222 DQ926372 DQ926388 DQ926512 DQ926569 DQ926578 DQ926634 EF177978 EF178004 EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 AY866854 AY882579 AY927661 AY941847 AY941848 AY941861 AY941864 AY941867 AY941869 AY941871 AY941872 AY941874 AY941875 AY941893 AY941894 AY941895 AY941897 AY941904 AY941908 AY941922 AY941932 AY941933 AY941934 AY941944 AY941946 AY941951 AY941954 AY941956 AY941963 AY941964 AY941966 AY941967 AY941969 AY944690 AY971127 D83678 D83681 D83684 D83685 D83694 DQ005284 DQ065696 DQ100659 DQ100685 DQ100775 DQ100819 DQ100846 DQ100857 DQ100907 DQ100930 DQ212508 DQ212509 DQ431475 DQ431476 DQ431501 DQ431573 DQ431575 DQ431576 DQ431580 DQ431582 DQ431606 DQ431607 DQ431622 DQ431628 DQ431633 DQ431634 DQ431637 DQ431642 DQ431643 DQ431646 DQ431653 DQ431658 DQ535263 DQ535266 DQ535268 DQ535293 DQ535308 DQ535373 DQ535382 DQ535397 DQ535424 DQ535426 DQ535429 DQ535437 DQ535439 DQ535440 DQ535461 DQ535466 DQ840703 DQ840706 DQ840712 DQ840713 DQ840745 DQ840782 DQ840813 DQ923052 DQ926032 DQ926064 DQ926133 DQ926340 DQ926374 DQ926384 DQ926552 EF177969 EF177975 EF177991 EF178015 EF178075 EF178091 EF178098 EF178099 EF221755 EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	-107663	-	GQ232933 AY003798 FJ840151 FJ873995 EF407840 AM279492 AM279629 HM774186 AY957513 EF633772 AY062305 DQ524058 AF174122 AY944701 DQ065664 DQ065670 DQ065719 DQ065726 DQ926522 EF178118 EF633803 FJ385316 GU570332 HM995173 HM995251 HM995315 HM995321 HM995523 AB021518 AB021527 AF035043 AF471473 AJ579183 DQ535349 DQ535444 GU570331 GU570333 X95661 Z47231 BC092518 TSC_hg19_v1_chr14_-_106926725 BX647160 AK123783 AK097306 AK097329	27602	-	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	39501	+	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	68343	-	AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF174049|SKAP2|8935|src kinase associated phosphoprotein 2##BC002963|IGHM|3507|immunoglobulin heavy constant mu##BC073767|IGHM|3507|immunoglobulin heavy constant mu##BC017356|IGHM|3507|immunoglobulin heavy constant mu##BC019235|IGHM|3507|immunoglobulin heavy constant mu##BC001872|IGHM|3507|immunoglobulin heavy constant mu##BC006180|IGHM|3507|immunoglobulin heavy constant mu##BX538126|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK126280|IGHD|3495|immunoglobulin heavy constant delta##AK128649|IGHD|3495|immunoglobulin heavy constant delta##AK127921|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.994579	CTCF.p2:18:0.995
chr15	75080159	75080340	reg1028547.p2	4.715	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	-5393	+	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	-5824	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-39057	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	24923	+	AK024055 NM_001030005 AB072900 BC018026 AY286501	38741	+	TSC_hg19_v1_chr15_-_75135477 AB528889 CU691158 AK075047 BC056423 AK299380	55204	-	X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like##AK024055|CPLX3|594855|complexin 3##NM_001030005|CPLX3|594855|complexin 3##AB072900|CPLX3|594855|complexin 3##BC018026|CPLX3|594855|complexin 3##AY286501|CPLX3|594855|complexin 3##AK075047|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC056423|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK299380|ULK3|25989|unc-51-like kinase 3 (C. elegans)	0.0	
chr15	85861691	85861871	reg1029873.p2	4.715	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-195463	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-336455	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-336544	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	62110	+	AF127481 NM_144767	358486	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	476316	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	0.0	
chr7	50308027	50308159	reg1027110.p2	4.715	+	NM_001161834	-172412	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	-175269	-	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-494823	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	36260	+	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	40226	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	209961	-	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1	0.996948	CTCF.p2:10:0.997
chr11	7299676	7299783	reg1030770.p1	4.714	+	AK055003 AB527847 CU692338 TSC_hg19_v1_chr11_+_7273475	-26292	+	TSC_hg19_v1_chr11_+_7273164 BC046367 NM_175733 AK315013	-26536	+	NM_014469 AK292271 AF069682 BC057796 BC029295 AB527964	-189472	+	NM_198474 BX647908 BC092488 TSC_hg19_v1_chr11_+_7506763 AK298137 BC035895 AK297778	206988	+	NM_003621 BC021714 TSC_hg19_v1_chr11_+_7535171	235374	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	235514	+	AK055003|SYT9|143425|synaptotagmin IX##BC046367|SYT9|143425|synaptotagmin IX##NM_175733|SYT9|143425|synaptotagmin IX##AK315013|SYT9|143425|synaptotagmin IX##NM_014469|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AK292271|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AF069682|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC057796|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC029295|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##NM_198474|OLFML1|283298|olfactomedin-like 1##BX647908|OLFML1|283298|olfactomedin-like 1##BC092488|OLFML1|283298|olfactomedin-like 1##AK298137|OLFML1|283298|olfactomedin-like 1##BC035895|OLFML1|283298|olfactomedin-like 1##AK297778|OLFML1|283298|olfactomedin-like 1##NM_003621|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##BC021714|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)	0.345707	CTCF.p2:2:0.346
chr1	221915816	221915997	reg1022725.p3	4.714	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-420	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-476	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-498	-	AY358602 BC007638 BC016552 NM_024746	805528	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	847271	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	875494	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.0	
chr17	29288263	29288405	reg1022599.p1	4.714	+	AK074196 AJ238994 AJ242782 NM_018404 TSC_hg19_v1_chr17_+_29248960 AK074204 AK222526 AJ272195 BC033758 DQ288859	-39502	+	CU692922 TSC_hg19_v1_chr17_-_29233257 AJ314645 AK026382 AK225474 BC024328 AK298495 NM_024683	-55083	-	TSC_hg19_v1_chr17_+_29158987 AL832103 BC015051 AJ314648 AY557611 NM_024857	-129349	+	NM_001184992 NM_032322 NM_197939 TSC_hg19_v1_chr17_+_29298040 BC126420 BC126422 BC144143 AJ496729 BC005084	9664	+	TSC_hg19_v1_chr17_+_29298062 AK226030 BC082262 AK312979 AK122646 AK122709 AB470605 AY598332	9806	+	TSC_hg19_v1_chr17_+_29421944 D12625 NM_000267 NM_001042492 NM_001128147	133610	+	AK074196|ADAP2|55803|ArfGAP with dual PH domains 2##AJ238994|ADAP2|55803|ArfGAP with dual PH domains 2##AJ242782|ADAP2|55803|ArfGAP with dual PH domains 2##NM_018404|ADAP2|55803|ArfGAP with dual PH domains 2##AK074204|ADAP2|55803|ArfGAP with dual PH domains 2##AK222526|ADAP2|55803|ArfGAP with dual PH domains 2##AJ272195|ADAP2|55803|ArfGAP with dual PH domains 2##BC033758|ADAP2|55803|ArfGAP with dual PH domains 2##DQ288859|ADAP2|55803|ArfGAP with dual PH domains 2##AJ314645|C17orf42|79736|chromosome 17 open reading frame 42##AK026382|C17orf42|79736|chromosome 17 open reading frame 42##AK225474|C17orf42|79736|chromosome 17 open reading frame 42##BC024328|C17orf42|79736|chromosome 17 open reading frame 42##AK298495|C17orf42|79736|chromosome 17 open reading frame 42##NM_024683|C17orf42|79736|chromosome 17 open reading frame 42##AL832103|ATAD5|79915|ATPase family, AAA domain containing 5##BC015051|ATAD5|79915|ATPase family, AAA domain containing 5##AJ314648|ATAD5|79915|ATPase family, AAA domain containing 5##AY557611|ATAD5|79915|ATPase family, AAA domain containing 5##NM_024857|ATAD5|79915|ATPase family, AAA domain containing 5##NM_001184992|RNF135|84282|ring finger protein 135##NM_032322|RNF135|84282|ring finger protein 135##NM_197939|RNF135|84282|ring finger protein 135##BC126420|RNF135|84282|ring finger protein 135##BC126422|RNF135|84282|ring finger protein 135##BC144143|RNF135|84282|ring finger protein 135##AJ496729|RNF135|84282|ring finger protein 135##BC005084|RNF135|84282|ring finger protein 135##AK226030|RNF135|84282|ring finger protein 135##BC082262|RNF135|84282|ring finger protein 135##AK312979|RNF135|84282|ring finger protein 135##AK122646|RNF135|84282|ring finger protein 135##AK122709|RNF135|84282|ring finger protein 135##AB470605|RNF135|84282|ring finger protein 135##AY598332|RNF135|84282|ring finger protein 135##D12625|NF1|4763|neurofibromin 1##NM_000267|NF1|4763|neurofibromin 1##NM_001042492|NF1|4763|neurofibromin 1##NM_001128147|NF1|4763|neurofibromin 1	0.0	
chr2	172560279	172560386	reg1028884.p1	4.714	+	TSC_hg19_v1_chr2_+_172544264 AK096579 AK075323 AF250307 BC109375 AF134477 AK316119 BC015038	-16041	+	TSC_hg19_v1_chr2_+_172543981 BX537412 AK055491 NM_001378 AK225759 BC091498 AY037160 AK308008 AK298561	-16308	+	TSC_hg19_v1_chr2_+_172379020 NM_001127383 NM_024843 AK128495 AK316588 AL136693 BC016900 AK291731 AK027115 AK225459 BC065290 HQ257890	-181377	+	AB527259 DQ891540 EU176607 TSC_hg19_v1_chr2_-_172750755 AK091071 BC016932 AJ496568 Y14494 AK022828 AK294638 NM_003705	190451	-	TSC_hg19_v1_chr2_+_172778944 NM_003642 AK313699 BC063003	218600	+	TSC_hg19_v1_chr2_+_172778970 AK309001	218634	+	AK096579|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK075323|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF250307|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC109375|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF134477|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK316119|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC015038|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BX537412|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK055491|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##NM_001378|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK225759|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC091498|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AY037160|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK308008|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK298561|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##NM_001127383|CYBRD1|79901|cytochrome b reductase 1##NM_024843|CYBRD1|79901|cytochrome b reductase 1##AK128495|CYBRD1|79901|cytochrome b reductase 1##AK316588|CYBRD1|79901|cytochrome b reductase 1##AL136693|CYBRD1|79901|cytochrome b reductase 1##BC016900|CYBRD1|79901|cytochrome b reductase 1##AK291731|CYBRD1|79901|cytochrome b reductase 1##AK027115|CYBRD1|79901|cytochrome b reductase 1##AK225459|CYBRD1|79901|cytochrome b reductase 1##BC065290|CYBRD1|79901|cytochrome b reductase 1##HQ257890|CYBRD1|79901|cytochrome b reductase 1##DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##NM_003642|HAT1|8520|histone acetyltransferase 1##AK313699|HAT1|8520|histone acetyltransferase 1##BC063003|HAT1|8520|histone acetyltransferase 1##AK309001|HAT1|8520|histone acetyltransferase 1	0.988809	CTCF.p2:-16:0.989
chr3	27984720	27984887	reg1031347.p1	4.714	+	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	-220602	-	AB031038 BC131712 NM_005442 AB463608 BC037568	-221010	-	TSC_hg19_v1_chr3_-_27525893 AK309734	-458873	-	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	298295	+	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	405579	-	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	405758	-	AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2	0.0	
chr9	108418489	108418607	reg1027035.p2	4.714	+	TSC_hg19_v1_chr9_+_108320420 NM_001079802 NM_001198963 NM_006731 AK300840 AK304460 BC058842 AB008226 AB609007	-98125	+	AK309817 TSC_hg19_v1_chr9_+_108210342 NM_001145313 NM_031919 NM_207647 AF088031 AK299350 AK296433 AK299491 AF316830	-208285	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	-411481	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	6209	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	38305	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	38370	+	NM_001079802|FKTN|2218|fukutin##NM_001198963|FKTN|2218|fukutin##NM_006731|FKTN|2218|fukutin##AK300840|FKTN|2218|fukutin##AK304460|FKTN|2218|fukutin##BC058842|FKTN|2218|fukutin##AB008226|FKTN|2218|fukutin##AK309817|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001145313|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_031919|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_207647|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF088031|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299350|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK296433|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299491|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF316830|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B	0.024389	
chr16	70472116	70472237	reg1024646.p1	4.713	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-91348	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-139028	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-139100	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	805	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	16323	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	30664	+	AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##AK096727|FUK|197258|fucokinase	0.0	
chr17	42287603	42287784	reg1001443.p1	4.713	+	TSC_hg19_v1_chr17_-_42277350 AK296689	-10308	-	BC037418 HQ258188 TSC_hg19_v1_chr17_-_42275499 BC113595 BC126113 NM_001098833 NM_020218	-12217	-	TSC_hg19_v1_chr17_+_42264588 AF370373	-23076	+	AK291733 TSC_hg19_v1_chr17_-_42296871	9185	-	X56687 TSC_hg19_v1_chr17_-_42296940	9239	-	TSC_hg19_v1_chr17_-_42297051 NM_001076684 NM_014233	9351	-	AK296689|ATXN7L3|56970|ataxin 7-like 3##BC037418|ATXN7L3|56970|ataxin 7-like 3##HQ258188|ATXN7L3|56970|ataxin 7-like 3##BC113595|ATXN7L3|56970|ataxin 7-like 3##BC126113|ATXN7L3|56970|ataxin 7-like 3##NM_001098833|ATXN7L3|56970|ataxin 7-like 3##NM_020218|ATXN7L3|56970|ataxin 7-like 3##AF370373|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2##AK291733|UBTF|7343|upstream binding transcription factor, RNA polymerase I##X56687|UBTF|7343|upstream binding transcription factor, RNA polymerase I##NM_001076684|UBTF|7343|upstream binding transcription factor, RNA polymerase I##NM_014233|UBTF|7343|upstream binding transcription factor, RNA polymerase I	0.0	
chr21	35756596	35756710	reg1028251.p2	4.713	+	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	-8828	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	-20307	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	-310724	+	AY789480 NM_001127670 EU008570	71419	-	AK311384 AY789479 EU008568 EU008569 AK313543 BC036452 NM_001127668 NM_001127669	75225	-	AK304336 NM_000219 BC069055	126999	-	NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK311384|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AY789479|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008568|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008569|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK313543|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC036452|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127668|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127669|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK304336|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_000219|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC069055|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1	0.0	
chr8	41435441	41435622	reg1026253.p2	4.713	+	TSC_hg19_v1_chr8_+_41386779 AK095334 AK313373	-48759	+	NM_032336 AK299207 BC027454 TSC_hg19_v1_chr8_+_41386745 BC005995	-48794	+	AF068291 TSC_hg19_v1_chr8_+_41348140 BC012032 NM_001002296	-87382	+	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	163	+	AB587362 AK057898 NM_152568	69344	-	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	87232	-	AK095334|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK313373|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##NM_032336|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK299207|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC027454|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC005995|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AF068291|GOLGA7|51125|golgin A7##BC012032|GOLGA7|51125|golgin A7##NM_001002296|GOLGA7|51125|golgin A7##NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic	0.418253	CTCF.p2:19:0.418
chr9	113840736	113840916	reg1031363.p1	4.713	+	TSC_hg19_v1_chr9_-_113801481 AK290287	-39324	-	AK298590 TSC_hg19_v1_chr9_-_113801086	-39793	-	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	-40414	-	BC111086 NM_205859	249886	-	TSC_hg19_v1_chr9_-_114245830 AK308313	405002	-	TSC_hg19_v1_chr9_-_114246233 AK122712	405439	-	AK290287|LPAR1|1902|lysophosphatidic acid receptor 1##AK298590|LPAR1|1902|lysophosphatidic acid receptor 1##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1##BC111086|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2##NM_205859|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2##AK308313|KIAA0368|23392|KIAA0368##AK122712|KIAA0368|23392|KIAA0368	0.0	
chr9	128393679	128393746	reg1029968.p2	4.713	+	TSC_hg19_v1_chr9_+_128024122 AK056493 NM_015635 AB040954 BC114937 BC114962	-369563	+	TSC_hg19_v1_chr9_+_128024104 BC110990	-369608	+	TSC_hg19_v1_chr9_+_128024097 AK296381	-369614	+	TSC_hg19_v1_chr9_-_128469297 M37191	75598	-	TSC_hg19_v1_chr9_-_128469466 AK290060	75755	-	AL833042 TSC_hg19_v1_chr9_-_128469485 AY633624 AY633625 AY633626 BC002326 BC003044	75767	-	AK056493|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##NM_015635|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AB040954|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114937|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114962|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC110990|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AK296381|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##M37191|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AK290060|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AL833042|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633624|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633625|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633626|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC002326|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC003044|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1	0.0	
chr10	82343534	82343687	reg1026154.p2	4.712	+	AK123978 NM_001145719	-43036	+	AK123885 NM_207372	-45953	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-129506	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	1291472	+	DQ857894 NM_001165973	1293832	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3555647	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.570573	CTCF.p2:15:0.571
chr11	115943628	115943736	reg1027730.p1	4.712	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-568502	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-855034	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1394434	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	700016	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	715033	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	715056	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.678201	CTCF.p2:-1:0.678
chr13	64403885	64404029	reg1031563.p2	4.712	+	AK289924 NM_022843	-2414303	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-2414704	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-3432478	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	3400547	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	6278584	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	8036302	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.925991	CTCF.p2:-6:0.926
chr1	61231029	61231117	reg1026865.p2	4.712	+	BC027878 AK124828 NM_152377	-691640	-	BC032594 TSC_hg19_v1_chr1_-_60392478	-838604	-	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	-838688	-	AK092769 TSC_hg19_v1_chr1_+_61542908	311783	+	TSC_hg19_v1_chr1_+_61542928 AK299289 NM_001145511	311863	+	TSC_hg19_v1_chr1_+_61547427 AK299579 NM_001145512	316387	+	BC027878|C1orf87|127795|chromosome 1 open reading frame 87##AK124828|C1orf87|127795|chromosome 1 open reading frame 87##NM_152377|C1orf87|127795|chromosome 1 open reading frame 87##BC032594|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK299289|NFIA|4774|nuclear factor I/A##NM_001145511|NFIA|4774|nuclear factor I/A##AK299579|NFIA|4774|nuclear factor I/A##NM_001145512|NFIA|4774|nuclear factor I/A	0.969041	CTCF.p2:-4:0.969
chr19	51941595	51941718	reg1019657.p1	4.712	+	TSC_hg19_v1_chr19_-_51920897 AK289900 AF310233 AY358337 AK290542 AK294185 AK303514 AK303717 BC101725 BC143497 BC143500 AF301007 AK292025 AK308982 AY032685 AF311905 NM_001171156 NM_001171157 NM_001171158 NM_001171159 NM_001171160 NM_001171161 NM_033130	-20708	-	TSC_hg19_v1_chr19_-_51893838 BC085012 BC143997 BC043532 NM_001193623	-47831	-	BC074916 BC074917 BC126139 AF340019 BC069430 AF340020 NM_001161748 NM_030657	-50459	-	AF310234 AK290412 AF195092 AF223403 BC053319 AK290149 AK295589 NM_014442	20021	-	NM_001080405	38181	+	NM_033329	61990	-	AK289900|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF310233|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY358337|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK290542|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK294185|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303514|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303717|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC101725|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143497|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143500|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF301007|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK292025|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK308982|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY032685|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF311905|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171156|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171157|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171158|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171159|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171160|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171161|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_033130|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC085012|LOC147646|147646|uncharacterized LOC147646##BC043532|LOC147646|147646|uncharacterized LOC147646##NM_001193623|LOC147646|147646|uncharacterized LOC147646##BC074916|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC074917|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC126139|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340019|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC069430|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340020|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_001161748|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_030657|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF310234|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290412|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF195092|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AF223403|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##BC053319|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK290149|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##AK295589|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_014442|SIGLEC8|27181|sialic acid binding Ig-like lectin 8##NM_001080405|CEACAM18|729767|carcinoembryonic antigen-related cell adhesion molecule 18##NM_033329|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)	0.965906	CTCF.p2:27:0.944
chr2	101211446	101211553	reg1030279.p2	4.712	+	TSC_hg19_v1_chr2_+_101179454 NM_024065 BC001021 AK300827 AF110511 AF267853	-32063	+	AB164464 NM_001011717	-124556	+	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	-177402	-	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	225267	+	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	407223	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	556284	-	NM_024065|PDCL3|79031|phosducin-like 3##BC001021|PDCL3|79031|phosducin-like 3##AK300827|PDCL3|79031|phosducin-like 3##AF110511|PDCL3|79031|phosducin-like 3##AF267853|PDCL3|79031|phosducin-like 3##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S##BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)	0.626067	CTCF.p2:19:0.509
chr3	180364111	180364227	reg1026117.p1	4.712	+	AB075860 TSC_hg19_v1_chr3_+_180320970	-43206	+	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	-44166	+	AB032593 NM_016559 AB032592 TSC_hg19_v1_chr3_-_179754937 AK299633 AK294501 AK314283 BC036183	-609443	-	AK304270 NM_181426	33102	-	TSC_hg19_v1_chr3_+_180630246 NM_001013438 NM_001013439 NM_005087	266014	+	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	266309	+	AB075860|TTC14|151613|tetratricopeptide repeat domain 14##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##AB032593|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_016559|PEX5L|51555|peroxisomal biogenesis factor 5-like##AB032592|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK299633|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK294501|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK314283|PEX5L|51555|peroxisomal biogenesis factor 5-like##BC036183|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK304270|CCDC39|339829|coiled-coil domain containing 39##NM_181426|CCDC39|339829|coiled-coil domain containing 39##NM_001013438|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013439|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_005087|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1	0.153448	
chr5	125937001	125937128	reg1025245.p2	4.712	+	AK023255 NM_032177 TSC_hg19_v1_chr5_+_125936641 BC021161 AK024065 AK298497 AK225464 CR457305 DQ893213 DQ896542	-432	+	TSC_hg19_v1_chr5_-_125930891 AB489160 EU831757 EU831835 S74728 BC073174 BC071712 AK295526 BC002515 AK312459 AK297365 NM_001182 NM_001201377 NM_001202404	-6208	-	NM_001146322 AK303857	-136248	+	BC130495 BC130497 AK131015 NM_207408 HQ258080	30351	+	NM_005573 BC052951	175251	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	175767	+	AK023255|PHAX|51808|phosphorylated adaptor for RNA export##NM_032177|PHAX|51808|phosphorylated adaptor for RNA export##BC021161|PHAX|51808|phosphorylated adaptor for RNA export##AK024065|PHAX|51808|phosphorylated adaptor for RNA export##AK298497|PHAX|51808|phosphorylated adaptor for RNA export##AK225464|PHAX|51808|phosphorylated adaptor for RNA export##CR457305|PHAX|51808|phosphorylated adaptor for RNA export##DQ893213|PHAX|51808|phosphorylated adaptor for RNA export##DQ896542|PHAX|51808|phosphorylated adaptor for RNA export##EU831757|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##EU831835|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##S74728|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC073174|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC071712|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK295526|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC002515|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK312459|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK297365|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001182|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001201377|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001202404|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001146322|GRAMD3|65983|GRAM domain containing 3##AK303857|GRAMD3|65983|GRAM domain containing 3##BC130495|C5orf48|389320|chromosome 5 open reading frame 48##BC130497|C5orf48|389320|chromosome 5 open reading frame 48##AK131015|C5orf48|389320|chromosome 5 open reading frame 48##NM_207408|C5orf48|389320|chromosome 5 open reading frame 48##HQ258080|C5orf48|389320|chromosome 5 open reading frame 48##NM_005573|LMNB1|4001|lamin B1##BC052951|LMNB1|4001|lamin B1##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1	0.932975	CTCF.p2:-12:0.933
chr6	41394172	41394309	reg1031560.p2	4.712	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-90674	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-139816	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-198172	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	119919	+	TSC_hg19_v1_chr6_+_41514342 BC052803	120097	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	211982	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	0.0	
chr7	105405714	105405845	reg1027828.p1	4.712	+	AK300338 NM_138495	-86171	-	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	-183844	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	-233133	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	111206	-	TSC_hg19_v1_chr7_+_105517250 AK125261	111485	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	197919	+	AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1##BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##AK125261|CDHR3|222256|cadherin-related family member 3##NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3	0.0	
chr8	41649771	41649951	reg1027218.p1	4.712	+	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	-127098	-	AB587362 AK057898 NM_152568	-144986	-	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	-214167	+	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	5279	-	AK026601 TSC_hg19_v1_chr8_+_41685847	35964	+	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	104449	-	AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic	0.0	
chr10	5904582	5904747	reg1027315.p2	4.711	+	TSC_hg19_v1_chr10_-_5855394 Y13286 AK297177 AK297554 AK312485 NM_001115156 NM_001494	-49229	-	BX648038 AB451295 AB451429 BT006868 CR457073 D13988 DQ890573 DQ893733 BC005145 TSC_hg19_v1_chr10_-_5855330 AK309360	-49398	-	TSC_hg19_v1_chr10_+_5772610 AB095927	-131992	+	TSC_hg19_v1_chr10_-_5931834 BC067892 NM_001009941 NM_001009943 NM_019046	27192	-	TSC_hg19_v1_chr10_+_5932205 AK095343	27535	+	TSC_hg19_v1_chr10_+_5932214 NM_178150	27547	+	Y13286|GDI2|2665|GDP dissociation inhibitor 2##AK297177|GDI2|2665|GDP dissociation inhibitor 2##AK297554|GDI2|2665|GDP dissociation inhibitor 2##AK312485|GDI2|2665|GDP dissociation inhibitor 2##NM_001115156|GDI2|2665|GDP dissociation inhibitor 2##NM_001494|GDI2|2665|GDP dissociation inhibitor 2##BX648038|GDI2|2665|GDP dissociation inhibitor 2##AB451295|GDI2|2665|GDP dissociation inhibitor 2##AB451429|GDI2|2665|GDP dissociation inhibitor 2##BT006868|GDI2|2665|GDP dissociation inhibitor 2##CR457073|GDI2|2665|GDP dissociation inhibitor 2##D13988|GDI2|2665|GDP dissociation inhibitor 2##DQ890573|GDI2|2665|GDP dissociation inhibitor 2##DQ893733|GDI2|2665|GDP dissociation inhibitor 2##BC005145|GDI2|2665|GDP dissociation inhibitor 2##AK309360|GDI2|2665|GDP dissociation inhibitor 2##AB095927|FAM208B|54906|family with sequence similarity 208, member B##BC067892|ANKRD16|54522|ankyrin repeat domain 16##NM_001009941|ANKRD16|54522|ankyrin repeat domain 16##NM_001009943|ANKRD16|54522|ankyrin repeat domain 16##NM_019046|ANKRD16|54522|ankyrin repeat domain 16##AK095343|FBXO18|84893|F-box protein, helicase, 18##NM_178150|FBXO18|84893|F-box protein, helicase, 18	0.0	
chr1	172349952	172350132	reg1017435.p1	4.711	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-539339	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-599204	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-599228	+	AL035295 NM_139240 BC038410	39786	+	TSC_hg19_v1_chr1_-_172413202 BC006539	63146	-	TSC_hg19_v1_chr1_-_172413207 AK308201	63165	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.0	
chr13	46064374	46064481	reg1030255.p2	4.711	+	TSC_hg19_v1_chr13_+_46039081 NM_031431 AF349676 AF332595 AK026305 AK225466 AK225952 BX648211 AK294959 AK304248 AK314387 BC038953 CU691622	-25330	+	TSC_hg19_v1_chr13_-_45992486 BC132739 BC136760 BC144401 AK094133 AK095465 AK302967 NM_001010875	-71933	-	TSC_hg19_v1_chr13_-_45992456 BC129808	-71967	-	BC131494 AK057244 NM_182542	125438	-	AK093129 AX747942 NM_152719	212018	+	AK096522 AB463764 BC041372 NM_198849	361373	-	NM_031431|COG3|83548|component of oligomeric golgi complex 3##AF349676|COG3|83548|component of oligomeric golgi complex 3##AF332595|COG3|83548|component of oligomeric golgi complex 3##AK026305|COG3|83548|component of oligomeric golgi complex 3##AK225466|COG3|83548|component of oligomeric golgi complex 3##AK225952|COG3|83548|component of oligomeric golgi complex 3##BX648211|COG3|83548|component of oligomeric golgi complex 3##AK294959|COG3|83548|component of oligomeric golgi complex 3##AK304248|COG3|83548|component of oligomeric golgi complex 3##AK314387|COG3|83548|component of oligomeric golgi complex 3##BC038953|COG3|83548|component of oligomeric golgi complex 3##BC132739|SLC25A30|253512|solute carrier family 25, member 30##BC136760|SLC25A30|253512|solute carrier family 25, member 30##BC144401|SLC25A30|253512|solute carrier family 25, member 30##AK094133|SLC25A30|253512|solute carrier family 25, member 30##AK095465|SLC25A30|253512|solute carrier family 25, member 30##AK302967|SLC25A30|253512|solute carrier family 25, member 30##NM_001010875|SLC25A30|253512|solute carrier family 25, member 30##BC129808|SLC25A30|253512|solute carrier family 25, member 30##BC131494|FAM194B|220081|family with sequence similarity 194, member B##AK057244|FAM194B|220081|family with sequence similarity 194, member B##NM_182542|FAM194B|220081|family with sequence similarity 194, member B##AK093129|SPERT|220082|spermatid associated##NM_152719|SPERT|220082|spermatid associated##BC041372|SIAH3|283514|seven in absentia homolog 3 (Drosophila)##NM_198849|SIAH3|283514|seven in absentia homolog 3 (Drosophila)	0.0	
chr15	90437222	90437375	reg1029863.p1	4.711	+	TSC_hg19_v1_chr15_-_90437227 DQ892982 DQ896230 BC002785 AL110108 BC007773 AK222698 AK294712 X99459 BC010020 AK312467	-81	-	TSC_hg19_v1_chr15_-_90358085 AB209918 NM_001150 AK298242	-79226	-	AB462940 X13276 TSC_hg19_v1_chr15_-_90349860 BC058928 M22324	-87422	-	NM_005829	318	-	AK093274 AX748027 CU691000 TSC_hg19_v1_chr15_-_90456145 AK000495 BC053602 NM_001199058 NM_182616	18807	-	TSC_hg19_v1_chr15_+_90544707 BC020301 AK094712 NM_198526	107391	+	DQ892982|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ896230|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC002785|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AL110108|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC007773|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK222698|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK294712|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##X99459|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##BC010020|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK312467|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AB209918|ANPEP|290|alanyl (membrane) aminopeptidase##NM_001150|ANPEP|290|alanyl (membrane) aminopeptidase##AK298242|ANPEP|290|alanyl (membrane) aminopeptidase##X13276|ANPEP|290|alanyl (membrane) aminopeptidase##BC058928|ANPEP|290|alanyl (membrane) aminopeptidase##M22324|ANPEP|290|alanyl (membrane) aminopeptidase##NM_005829|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##AK093274|C15orf38|348110|chromosome 15 open reading frame 38##AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##BC053602|C15orf38|348110|chromosome 15 open reading frame 38##NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##NM_182616|C15orf38|348110|chromosome 15 open reading frame 38##BC020301|ZNF710|374655|zinc finger protein 710##AK094712|ZNF710|374655|zinc finger protein 710##NM_198526|ZNF710|374655|zinc finger protein 710	0.0	
chr18	477701	477817	reg1028658.p2	4.711	+	AK097544 TSC_hg19_v1_chr18_+_268153	-209606	+	TSC_hg19_v1_chr18_-_268046 AY573302 AY573303 CU679685 DQ892768 EU176747 AK225709 L36529 AK314755 AK225067 BC010381 NM_005131	-209726	-	TSC_hg19_v1_chr18_+_158587 U30888 AB528508 DQ890594 DQ893762 CU678498 BT007183	-319117	+	AB005145 TSC_hg19_v1_chr18_-_500702 BC060789 AB038518 NM_130386	22925	-	BC029515 NM_004066 U03270 AK312047 CU688680 DQ890970 DQ894144	102623	+	BC025381 NM_014410 AK299319	119250	+	AY573302|THOC1|9984|THO complex 1##AY573303|THOC1|9984|THO complex 1##DQ892768|THOC1|9984|THO complex 1##EU176747|THOC1|9984|THO complex 1##AK225709|THOC1|9984|THO complex 1##L36529|THOC1|9984|THO complex 1##AK314755|THOC1|9984|THO complex 1##AK225067|THOC1|9984|THO complex 1##BC010381|THOC1|9984|THO complex 1##NM_005131|THOC1|9984|THO complex 1##U30888|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##DQ890594|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##DQ893762|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##BT007183|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AB005145|COLEC12|81035|collectin sub-family member 12##BC060789|COLEC12|81035|collectin sub-family member 12##AB038518|COLEC12|81035|collectin sub-family member 12##NM_130386|COLEC12|81035|collectin sub-family member 12##BC029515|CETN1|1068|centrin, EF-hand protein, 1##NM_004066|CETN1|1068|centrin, EF-hand protein, 1##U03270|CETN1|1068|centrin, EF-hand protein, 1##AK312047|CETN1|1068|centrin, EF-hand protein, 1##DQ890970|CETN1|1068|centrin, EF-hand protein, 1##DQ894144|CETN1|1068|centrin, EF-hand protein, 1##BC025381|CLUL1|27098|clusterin-like 1 (retinal)##NM_014410|CLUL1|27098|clusterin-like 1 (retinal)##AK299319|CLUL1|27098|clusterin-like 1 (retinal)	0.036752	
chr4	109039764	109039914	reg1030977.p1	4.711	+	TSC_hg19_v1_chr4_+_108911045 BC000306 AM392952 AM393255 DQ891419 DQ894593 AB528829 AF001902	-128766	+	AK314444 TSC_hg19_v1_chr4_+_108911011	-128827	+	AF001903 NM_001184705 NM_005327 TSC_hg19_v1_chr4_+_108910984 X96752	-128903	+	AK303272 NM_001166119	48075	-	TSC_hg19_v1_chr4_+_109088684 BC020624	48845	+	TSC_hg19_v1_chr4_-_109090113 AF288571 AK225772 NM_001130713 NM_001130714 NM_016269	49960	-	BC000306|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ891419|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ894593|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001902|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK314444|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001903|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_001184705|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_005327|HADH|3033|hydroxyacyl-CoA dehydrogenase##X96752|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK303272|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1##BC020624|LOC641518|641518|uncharacterized LOC641518##AF288571|LEF1|51176|lymphoid enhancer-binding factor 1##AK225772|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1##NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1	0.0	
chr6	25070905	25071068	reg1004064.p1	4.711	+	TSC_hg19_v1_chr6_-_24936189 AK299047	-134803	-	AB002384 NM_014722	-159792	-	U49187 AK300138 BC001232 NM_015864	-193469	-	TSC_hg19_v1_chr6_+_25279316 BC040903	208332	+	TSC_hg19_v1_chr6_+_25279656 AK125696 NM_001173977 NM_017640	208672	+	TSC_hg19_v1_chr6_+_25279772 BC140770 FJ009082	208908	+	AK299047|FAM65B|9750|family with sequence similarity 65, member B##AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##BC040903|LRRC16A|55604|leucine rich repeat containing 16A##AK125696|LRRC16A|55604|leucine rich repeat containing 16A##NM_001173977|LRRC16A|55604|leucine rich repeat containing 16A##NM_017640|LRRC16A|55604|leucine rich repeat containing 16A##BC140770|LRRC16A|55604|leucine rich repeat containing 16A##FJ009082|LRRC16A|55604|leucine rich repeat containing 16A	0.0	
chr8	138738342	138738471	reg1030054.p1	4.711	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-2268205	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-2268748	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-3013132	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	770700	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	1187838	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	1976876	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.027568	
chr17	80821814	80821994	reg1022720.p1	4.710	+	BC109036 BC109037 AK301690 AK023903 NM_024702	-23995	-	TSC_hg19_v1_chr17_+_80710051 AJ006417 DQ891885 EU176650	-111856	+	TSC_hg19_v1_chr17_+_80710000 AK091959 AX747278	-111896	+	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	184566	-	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	187765	-	TSC_hg19_v1_chr17_+_81037508 BC082252 NM_001004431 BC118558 BC118638	215638	+	BC109036|ZNF750|79755|zinc finger protein 750##BC109037|ZNF750|79755|zinc finger protein 750##AK301690|ZNF750|79755|zinc finger protein 750##AK023903|ZNF750|79755|zinc finger protein 750##NM_024702|ZNF750|79755|zinc finger protein 750##AJ006417|TBCD|6904|tubulin folding cofactor D##DQ891885|TBCD|6904|tubulin folding cofactor D##EU176650|TBCD|6904|tubulin folding cofactor D##AK091959|TBCD|6904|tubulin folding cofactor D##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like##NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like	0.0	
chr19	12978504	12978607	reg1029640.p2	4.710	+	NM_014975 TSC_hg19_v1_chr19_+_12949305 AB023190 AK297553 AB384551	-29234	+	TSC_hg19_v1_chr19_-_12946243 BC005063 NM_031429 AK093672 AX748256	-32314	-	TSC_hg19_v1_chr19_-_12945394 AB593122	-33163	-	FJ752529 BT007047 BC010419 TSC_hg19_v1_chr19_-_12992222	13632	-	AK075449 TSC_hg19_v1_chr19_-_12992251 AF047016 AB004574 AK297493 AF045937 AK315358 BC065209 AF060222 AK311145 NM_001375	13736	-	AB463820 BC033580 BC040000 U65404 NM_006563	19431	-	NM_014975|MAST1|22983|microtubule associated serine/threonine kinase 1##AB023190|MAST1|22983|microtubule associated serine/threonine kinase 1##AK297553|MAST1|22983|microtubule associated serine/threonine kinase 1##BC005063|RTBDN|83546|retbindin##NM_031429|RTBDN|83546|retbindin##AK093672|RTBDN|83546|retbindin##AB593122|RTBDN|83546|retbindin##FJ752529|DNASE2|1777|deoxyribonuclease II, lysosomal##BT007047|DNASE2|1777|deoxyribonuclease II, lysosomal##BC010419|DNASE2|1777|deoxyribonuclease II, lysosomal##AK075449|DNASE2|1777|deoxyribonuclease II, lysosomal##AF047016|DNASE2|1777|deoxyribonuclease II, lysosomal##AB004574|DNASE2|1777|deoxyribonuclease II, lysosomal##AK297493|DNASE2|1777|deoxyribonuclease II, lysosomal##AF045937|DNASE2|1777|deoxyribonuclease II, lysosomal##AK315358|DNASE2|1777|deoxyribonuclease II, lysosomal##BC065209|DNASE2|1777|deoxyribonuclease II, lysosomal##AF060222|DNASE2|1777|deoxyribonuclease II, lysosomal##AK311145|DNASE2|1777|deoxyribonuclease II, lysosomal##NM_001375|DNASE2|1777|deoxyribonuclease II, lysosomal##BC033580|KLF1|10661|Kruppel-like factor 1 (erythroid)##BC040000|KLF1|10661|Kruppel-like factor 1 (erythroid)##U65404|KLF1|10661|Kruppel-like factor 1 (erythroid)##NM_006563|KLF1|10661|Kruppel-like factor 1 (erythroid)	0.016144	
chr2	126503210	126503367	reg1033206.p1	4.710	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-1720424	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-3990051	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-4008823	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	910419	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	910504	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	1361453	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.998958	CTCF.p2:-20:0.999
chr4	25995455	25995569	reg1030307.p1	4.710	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-79648	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-130958	-	NM_001177999 AK314514	-337422	+	L07875 BC020780 NM_005349 NM_203283	325807	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	326797	+	TSC_hg19_v1_chr4_+_26322635 AK302230	327124	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.0	
chr10	1121003	1121129	reg1027174.p1	4.709	+	TSC_hg19_v1_chr10_+_1102822 AK292591	-18240	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-18297	+	BC057827 TSC_hg19_v1_chr10_-_1102645	-18414	-	AF034837 NM_018702	658603	-	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	1988681	+	AK092597 AX747622 NM_001242339	1989752	+	AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC057827|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet	0.669065	CTCF.p2:52:0.669
chr2	198174469	198174612	reg1022214.p1	4.709	+	AB128038 AB527353 TSC_hg19_v1_chr2_-_197791382 BX648642 AK022439 NM_024989 BC040517	-383096	-	BC137150 BC137151 AY358249 NM_213608	-499603	-	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	-510127	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	842	-	TSC_hg19_v1_chr2_-_198175459 BC063622	933	-	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	979	-	AB128038|PGAP1|80055|post-GPI attachment to proteins 1##BX648642|PGAP1|80055|post-GPI attachment to proteins 1##AK022439|PGAP1|80055|post-GPI attachment to proteins 1##NM_024989|PGAP1|80055|post-GPI attachment to proteins 1##BC040517|PGAP1|80055|post-GPI attachment to proteins 1##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK124039|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44	0.0	
chr3	29806249	29806381	reg1027998.p1	4.709	+	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	-483351	+	NM_001040432	-1374329	+	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	-1415754	-	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	841707	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	842088	+	AL832766 NM_207359	1129837	-	NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1	0.0	
chr6	142553700	142553833	reg1028849.p1	4.709	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-43137	+	BC005937 TSC_hg19_v1_chr6_+_142468418 AF141341 AB464348 CR457207 CU692682 DQ893520 DQ896504 AJ420507	-85344	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	-85360	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	69303	+	TSC_hg19_v1_chr6_+_142623443 BX640873	69640	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	712562	-	BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC005937|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF141341|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR457207|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##DQ893520|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##DQ896504|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AJ420507|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BX640873|GPR126|57211|G protein-coupled receptor 126##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2	0.0	
chr6	43197145	43197285	reg1029318.p1	4.709	+	TSC_hg19_v1_chr6_-_43197220 BC011683 AF040105 NM_006443 NM_199184 EU585603	-16	-	TSC_hg19_v1_chr6_+_43149926 BC028159	-47278	+	TSC_hg19_v1_chr6_+_43149918 AK125228 CR749511 NM_015089 CR749841	-47301	+	NM_032538 TSC_hg19_v1_chr6_+_43211227	14013	+	TSC_hg19_v1_chr6_+_43265994 NM_006672 NM_153320 AF097518	68782	+	TSC_hg19_v1_chr6_+_43266009 AK290806 AK309570 AK314822 BC033805 AK290796 BC017963 DQ893614 DQ896844 AF210455 AY050498	68837	+	BC011683|C6orf108|10591|chromosome 6 open reading frame 108##AF040105|C6orf108|10591|chromosome 6 open reading frame 108##NM_006443|C6orf108|10591|chromosome 6 open reading frame 108##NM_199184|C6orf108|10591|chromosome 6 open reading frame 108##EU585603|C6orf108|10591|chromosome 6 open reading frame 108##BC028159|CUL9|23113|cullin 9##AK125228|CUL9|23113|cullin 9##CR749511|CUL9|23113|cullin 9##NM_015089|CUL9|23113|cullin 9##CR749841|CUL9|23113|cullin 9##NM_032538|TTBK1|84630|tau tubulin kinase 1##NM_006672|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_153320|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF097518|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290806|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK309570|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK314822|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC033805|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290796|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC017963|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ893614|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ896844|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF210455|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AY050498|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7	0.671011	CTCF.p2:8:0.671
chr6	90994454	90994579	reg1027505.p2	4.709	+	AB527151 AF296766 NM_032602	-390330	+	BC012574 TSC_hg19_v1_chr6_+_90539629 BC027850 AF154415 BC029386 BC132828 BC132830	-454817	+	TSC_hg19_v1_chr6_+_90539598 BC056685 NM_001137667 NM_001137668 NM_012115	-454922	+	AJ271878 TSC_hg19_v1_chr6_-_91006556 NM_021813	11995	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	12096	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	302167	-	AF296766|GJA10|84694|gap junction protein, alpha 10, 62kDa##NM_032602|GJA10|84694|gap junction protein, alpha 10, 62kDa##BC012574|CASP8AP2|9994|caspase 8 associated protein 2##BC027850|CASP8AP2|9994|caspase 8 associated protein 2##AF154415|CASP8AP2|9994|caspase 8 associated protein 2##BC029386|CASP8AP2|9994|caspase 8 associated protein 2##BC132828|CASP8AP2|9994|caspase 8 associated protein 2##BC132830|CASP8AP2|9994|caspase 8 associated protein 2##BC056685|CASP8AP2|9994|caspase 8 associated protein 2##NM_001137667|CASP8AP2|9994|caspase 8 associated protein 2##NM_001137668|CASP8AP2|9994|caspase 8 associated protein 2##NM_012115|CASP8AP2|9994|caspase 8 associated protein 2##AJ271878|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_021813|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7	0.0	
chr10	112263851	112264031	reg1026146.p1	4.708	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-6190	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-199241	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-199348	-	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	63551	+	AF067163 TSC_hg19_v1_chr10_+_112344155	80174	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	140188	+	NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20	0.0	
chr10	127557072	127557189	reg1027834.p1	4.708	+	TSC_hg19_v1_chr10_+_127512114 AY064248 AY064249 NM_016567 NM_078468 NM_078469 AB040450 AB040451 AK055691 AK304529 BC009771 AK300767 AB463448 AL834458 AY092061	-45015	+	TSC_hg19_v1_chr10_-_127511833 NM_000375	-45294	-	BC002573 TSC_hg19_v1_chr10_-_127511816	-45318	-	AK001751 AY064250 AF427340 NM_018180	12737	-	TSC_hg19_v1_chr10_-_127585056 BC068471	27900	-	NM_145235 BC024189 CR627249 TSC_hg19_v1_chr10_+_127585124 AY358154 AK304407 DQ786222	28026	+	AY064248|BCCIP|56647|BRCA2 and CDKN1A interacting protein##AY064249|BCCIP|56647|BRCA2 and CDKN1A interacting protein##NM_016567|BCCIP|56647|BRCA2 and CDKN1A interacting protein##NM_078468|BCCIP|56647|BRCA2 and CDKN1A interacting protein##NM_078469|BCCIP|56647|BRCA2 and CDKN1A interacting protein##AB040450|BCCIP|56647|BRCA2 and CDKN1A interacting protein##AB040451|BCCIP|56647|BRCA2 and CDKN1A interacting protein##AK055691|BCCIP|56647|BRCA2 and CDKN1A interacting protein##AK304529|BCCIP|56647|BRCA2 and CDKN1A interacting protein##BC009771|BCCIP|56647|BRCA2 and CDKN1A interacting protein##AK300767|BCCIP|56647|BRCA2 and CDKN1A interacting protein##AL834458|BCCIP|56647|BRCA2 and CDKN1A interacting protein##AY092061|BCCIP|56647|BRCA2 and CDKN1A interacting protein##NM_000375|UROS|7390|uroporphyrinogen III synthase##BC002573|UROS|7390|uroporphyrinogen III synthase##AK001751|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AY064250|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AF427340|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##NM_018180|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##BC068471|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##NM_145235|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##BC024189|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##CR627249|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##AY358154|FANK1|92565|fibronectin type III and ankyrin repeat domains 1	0.0	
chr13	95844286	95844373	reg1003095.p2	4.708	+	X65666 X71136 AB464716 NM_007084	-480011	-	TSC_hg19_v1_chr13_+_95254110 NM_180989 BC033906 BC052243 AK126794	-590227	+	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	-595833	-	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	109383	-	NM_001160100 NM_182848 AK055855	241525	+	TSC_hg19_v1_chr13_+_96204946 NM_006984 BC010920 U89916 AK315737 DQ892831 DQ896077 CR456845	360645	+	X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##NM_180989|GPR180|160897|G protein-coupled receptor 180##BC033906|GPR180|160897|G protein-coupled receptor 180##BC052243|GPR180|160897|G protein-coupled receptor 180##AK126794|GPR180|160897|G protein-coupled receptor 180##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10##NM_006984|CLDN10|9071|claudin 10##BC010920|CLDN10|9071|claudin 10##U89916|CLDN10|9071|claudin 10##AK315737|CLDN10|9071|claudin 10##DQ892831|CLDN10|9071|claudin 10##DQ896077|CLDN10|9071|claudin 10##CR456845|CLDN10|9071|claudin 10	0.0	
chr15	74189872	74189968	reg1029679.p2	4.708	+	BC033516 NM_153356 AB449907	-23912	+	BC111368 NM_001039614	-146105	-	TSC_hg19_v1_chr15_+_73976784 AK296358 AK291721 AK309728	-213135	+	TSC_hg19_v1_chr15_+_74218789 NM_005576	28869	+	TSC_hg19_v1_chr15_+_74218802 BC068542 AK303982 AK314222	28881	+	TSC_hg19_v1_chr15_+_74218813 BC015090 L21186	28895	+	BC033516|TBC1D21|161514|TBC1 domain family, member 21##NM_153356|TBC1D21|161514|TBC1 domain family, member 21##AB449907|TBC1D21|161514|TBC1 domain family, member 21##BC111368|C15orf59|388135|chromosome 15 open reading frame 59##NM_001039614|C15orf59|388135|chromosome 15 open reading frame 59##AK296358|CD276|80381|CD276 molecule##AK291721|CD276|80381|CD276 molecule##AK309728|CD276|80381|CD276 molecule##NM_005576|LOXL1|4016|lysyl oxidase-like 1##BC068542|LOXL1|4016|lysyl oxidase-like 1##AK303982|LOXL1|4016|lysyl oxidase-like 1##AK314222|LOXL1|4016|lysyl oxidase-like 1##BC015090|LOXL1|4016|lysyl oxidase-like 1##L21186|LOXL1|4016|lysyl oxidase-like 1	0.754417	CTCF.p2:-3:0.706
chr17	76140463	76140642	reg1030834.p1	4.708	+	BC023597 NM_007267 TSC_hg19_v1_chr17_-_76128499	-12052	-	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	-13686	+	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	-15714	-	AY358510 NM_001163075	1881	+	TSC_hg19_v1_chr17_+_76164661 AJ002308 AY358916 NM_004710 BC000407 BC105992 BC029755 DQ891832 DQ895019	24108	+	AB451268 AB451395 BT006941 AB591021 BC007872 BC007986 BC006484 AK314950 K02581 TSC_hg19_v1_chr17_-_76183133 NM_003258	42627	-	BC023597|TMC6|11322|transmembrane channel-like 6##NM_007267|TMC6|11322|transmembrane channel-like 6##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6##AY358510|C17orf99|100141515|chromosome 17 open reading frame 99##NM_001163075|C17orf99|100141515|chromosome 17 open reading frame 99##AJ002308|SYNGR2|9144|synaptogyrin 2##AY358916|SYNGR2|9144|synaptogyrin 2##NM_004710|SYNGR2|9144|synaptogyrin 2##BC000407|SYNGR2|9144|synaptogyrin 2##BC105992|SYNGR2|9144|synaptogyrin 2##BC029755|SYNGR2|9144|synaptogyrin 2##DQ891832|SYNGR2|9144|synaptogyrin 2##DQ895019|SYNGR2|9144|synaptogyrin 2##AB451268|TK1|7083|thymidine kinase 1, soluble##AB451395|TK1|7083|thymidine kinase 1, soluble##BT006941|TK1|7083|thymidine kinase 1, soluble##BC007872|TK1|7083|thymidine kinase 1, soluble##BC007986|TK1|7083|thymidine kinase 1, soluble##BC006484|TK1|7083|thymidine kinase 1, soluble##AK314950|TK1|7083|thymidine kinase 1, soluble##K02581|TK1|7083|thymidine kinase 1, soluble##NM_003258|TK1|7083|thymidine kinase 1, soluble	0.0	
chr4	165898857	165899004	reg1028205.p1	4.708	+	BC089393 NM_001012414	-113	-	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	-20779	+	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	-20828	+	AK093201 AX747987 NM_152620	54220	+	CU690322 BC036301 BX648915 BX538029 TSC_hg19_v1_chr4_-_166033990	135031	-	TSC_hg19_v1_chr4_-_166034013 NM_001100389	135095	-	BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##AK093201|TRIM60|166655|tripartite motif containing 60##NM_152620|TRIM60|166655|tripartite motif containing 60##BC036301|TMEM192|201931|transmembrane protein 192##BX648915|TMEM192|201931|transmembrane protein 192##BX538029|TMEM192|201931|transmembrane protein 192##NM_001100389|TMEM192|201931|transmembrane protein 192	0.075124	
chr19	36193575	36193708	reg1028282.p2	4.707	+	BC107097 BC107098 NM_007000 AF085807	-35925	+	TSC_hg19_v1_chr19_+_36139253 D28426 BC002478 X54473 X13923	-54389	+	TSC_hg19_v1_chr19_+_36139222 AK312140	-54417	+	AF130255 NM_014383	10188	+	TSC_hg19_v1_chr19_+_36208923 AJ007041 NM_014727	15289	+	TSC_hg19_v1_chr19_+_36209125 AF186605	15545	+	BC107097|UPK1A|11045|uroplakin 1A##BC107098|UPK1A|11045|uroplakin 1A##NM_007000|UPK1A|11045|uroplakin 1A##AF085807|UPK1A|11045|uroplakin 1A##D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##AK312140|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##AF130255|ZBTB32|27033|zinc finger and BTB domain containing 32##NM_014383|ZBTB32|27033|zinc finger and BTB domain containing 32##AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##AF186605|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4	0.0	
chr19	37808749	37808881	reg1028298.p1	4.707	+	AK093182 AX747975 AY438646 NM_152604	-91450	+	TSC_hg19_v1_chr19_+_37709098 AK122892	-99667	+	BC051277 BC067088 BC080550 TSC_hg19_v1_chr19_-_37701446 AY147015 NM_152279	-107398	-	TSC_hg19_v1_chr19_+_37808794 AK056243	10	+	TSC_hg19_v1_chr19_+_37825560 AK301601 AB013897 AK299969 AK223616 BC017256 NM_181786 BC010024	16740	+	TSC_hg19_v1_chr19_+_37862089 NM_032453 BC014325 AK301135 AK091585 AX747074	53266	+	AK093182|ZNF383|163087|zinc finger protein 383##AY438646|ZNF383|163087|zinc finger protein 383##NM_152604|ZNF383|163087|zinc finger protein 383##AK122892|ZNF383|163087|zinc finger protein 383##BC051277|ZNF585B|92285|zinc finger protein 585B##BC067088|ZNF585B|92285|zinc finger protein 585B##BC080550|ZNF585B|92285|zinc finger protein 585B##AY147015|ZNF585B|92285|zinc finger protein 585B##NM_152279|ZNF585B|92285|zinc finger protein 585B##AK056243|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AK301601|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AB013897|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AK299969|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AK223616|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##BC017256|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##NM_181786|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##BC010024|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##NM_032453|ZNF527|84503|zinc finger protein 527##BC014325|ZNF527|84503|zinc finger protein 527##AK301135|ZNF527|84503|zinc finger protein 527##AK091585|ZNF527|84503|zinc finger protein 527	0.173262	
chr19	7717255	7717416	reg1000705.p2	4.707	+	AB002559 U63533 TSC_hg19_v1_chr19_+_7702028 AK302257 AB464275 BT006915	-15308	+	TSC_hg19_v1_chr19_+_7702012 BC002869	-15323	+	TSC_hg19_v1_chr19_+_7701995 NM_001127396 NM_006949 AK303701 AK314230 AK222967 AK222977	-15343	+	AF290874 AF323081 AY207314 BC069302 NM_001193374 NM_020415 TSC_hg19_v1_chr19_+_7733975 BC101554 BC101560 AF205952 AY359066	16647	+	TSC_hg19_v1_chr19_+_7741975 BC104796 BC104798 NM_174918 AF461156 BC035847	24632	+	NM_001042462 TSC_hg19_v1_chr19_+_7745726 AK292001	28382	+	AB002559|STXBP2|6813|syntaxin binding protein 2##U63533|STXBP2|6813|syntaxin binding protein 2##AK302257|STXBP2|6813|syntaxin binding protein 2##BT006915|STXBP2|6813|syntaxin binding protein 2##BC002869|STXBP2|6813|syntaxin binding protein 2##NM_001127396|STXBP2|6813|syntaxin binding protein 2##NM_006949|STXBP2|6813|syntaxin binding protein 2##AK303701|STXBP2|6813|syntaxin binding protein 2##AK314230|STXBP2|6813|syntaxin binding protein 2##AK222967|STXBP2|6813|syntaxin binding protein 2##AK222977|STXBP2|6813|syntaxin binding protein 2##AF290874|RETN|56729|resistin##AF323081|RETN|56729|resistin##AY207314|RETN|56729|resistin##BC069302|RETN|56729|resistin##NM_001193374|RETN|56729|resistin##NM_020415|RETN|56729|resistin##BC101554|RETN|56729|resistin##BC101560|RETN|56729|resistin##AF205952|RETN|56729|resistin##AY359066|RETN|56729|resistin##BC104796|C19orf59|199675|chromosome 19 open reading frame 59##BC104798|C19orf59|199675|chromosome 19 open reading frame 59##NM_174918|C19orf59|199675|chromosome 19 open reading frame 59##AF461156|C19orf59|199675|chromosome 19 open reading frame 59##BC035847|C19orf59|199675|chromosome 19 open reading frame 59##NM_001042462|TRAPPC5|126003|trafficking protein particle complex 5##AK292001|TRAPPC5|126003|trafficking protein particle complex 5	0.0	
chr2	155258787	155258907	reg1026158.p1	4.707	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-530403	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-923596	-	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-1683703	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	296342	+	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	1927843	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	1930316	-	NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	0.885373	CTCF.p2:-19:0.861
chr2	159313975	159314138	reg1030154.p1	4.707	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-473	+	TSC_hg19_v1_chr2_+_159313419 BC034473	-621	+	CU677295 BC105928 BC107596 BC107597 AK123220 AK058105 AF458588 BC015395 AK309246 TSC_hg19_v1_chr2_-_159313250 AK308783 AK311042 NM_001171637 NM_138803	-947	-	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	337779	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	511091	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	829092	-	NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##BC034473|PKP4|8502|plakophilin 4##BC105928|CCDC148|130940|coiled-coil domain containing 148##BC107596|CCDC148|130940|coiled-coil domain containing 148##BC107597|CCDC148|130940|coiled-coil domain containing 148##AK123220|CCDC148|130940|coiled-coil domain containing 148##AK058105|CCDC148|130940|coiled-coil domain containing 148##AF458588|CCDC148|130940|coiled-coil domain containing 148##BC015395|CCDC148|130940|coiled-coil domain containing 148##AK309246|CCDC148|130940|coiled-coil domain containing 148##AK308783|CCDC148|130940|coiled-coil domain containing 148##AK311042|CCDC148|130940|coiled-coil domain containing 148##NM_001171637|CCDC148|130940|coiled-coil domain containing 148##NM_138803|CCDC148|130940|coiled-coil domain containing 148##AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1	0.041079	
chr3	49577376	49577556	reg1003965.p2	4.707	+	AK297802 TSC_hg19_v1_chr3_+_49568448	-9057	+	TSC_hg19_v1_chr3_+_49547870 DQ893491 DQ896435	-29549	+	TSC_hg19_v1_chr3_+_49507721 NM_001165928 NM_001177634 NM_001177635 NM_001177636 NM_001177637 NM_001177638 NM_001177639 NM_001177640 NM_001177641 NM_001177642 NM_001177644 NM_004393 L19711 BC012740 BC014616 AK291692	-69675	+	TSC_hg19_v1_chr3_+_49591913 AF052224 NM_003458	14450	+	BC000362 BC001499 BC001826 NM_001640	133968	+	TSC_hg19_v1_chr3_+_49711791 AK314962	134309	+	AK297802|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##DQ893491|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##DQ896435|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001165928|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177634|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177635|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177636|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177637|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177638|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177639|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177640|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177641|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177642|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177644|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_004393|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##L19711|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##BC012740|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##BC014616|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##AK291692|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##AF052224|BSN|8927|bassoon (presynaptic cytomatrix protein)##NM_003458|BSN|8927|bassoon (presynaptic cytomatrix protein)##BC000362|APEH|327|N-acylaminoacyl-peptide hydrolase##BC001499|APEH|327|N-acylaminoacyl-peptide hydrolase##BC001826|APEH|327|N-acylaminoacyl-peptide hydrolase##NM_001640|APEH|327|N-acylaminoacyl-peptide hydrolase##AK314962|APEH|327|N-acylaminoacyl-peptide hydrolase	0.062153	
chr4	157034405	157034515	reg1028722.p2	4.707	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	-159412	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	-209583	+	AB528059 AJ252011 NM_017419	-247060	-	AB590688 BC051876 BC094746 AF260738 AK300480 AF244813 AK313817 BC041783 BC065490 TSC_hg19_v1_chr4_-_157892334 AM922296 AB033831	857757	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	858018	-	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	858099	-	BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##BC051876|PDGFC|56034|platelet derived growth factor C##BC094746|PDGFC|56034|platelet derived growth factor C##AF260738|PDGFC|56034|platelet derived growth factor C##AK300480|PDGFC|56034|platelet derived growth factor C##AF244813|PDGFC|56034|platelet derived growth factor C##AK313817|PDGFC|56034|platelet derived growth factor C##BC041783|PDGFC|56034|platelet derived growth factor C##AM922296|PDGFC|56034|platelet derived growth factor C##AB033831|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C	0.840225	CTCF.p2:-18:0.840
chr4	87927943	87928124	reg1025337.p2	4.707	+	TSC_hg19_v1_chr4_+_87857481 L13743	-70550	+	TSC_hg19_v1_chr4_+_87856199 AK296149 NM_001166693 AK300364 BC017432 AK302199	-71818	+	BC016746 BC063410 NM_144645	-114473	-	TSC_hg19_v1_chr4_+_87928422 L13773 BC114930 NM_005935 AK296243 L25050 AB385236	288	+	TSC_hg19_v1_chr4_+_87968211 AF177238 AF177239	40218	+	BC041901 TSC_hg19_v1_chr4_-_88141661 BX640727 BX538173 NM_020803 CR749265 BX640744 BX647454 BC041384	213629	-	AK296149|AFF1|4299|AF4/FMR2 family, member 1##NM_001166693|AFF1|4299|AF4/FMR2 family, member 1##AK300364|AFF1|4299|AF4/FMR2 family, member 1##BC017432|AFF1|4299|AF4/FMR2 family, member 1##BC016746|C4orf36|132989|chromosome 4 open reading frame 36##BC063410|C4orf36|132989|chromosome 4 open reading frame 36##NM_144645|C4orf36|132989|chromosome 4 open reading frame 36##L13773|AFF1|4299|AF4/FMR2 family, member 1##BC114930|AFF1|4299|AF4/FMR2 family, member 1##NM_005935|AFF1|4299|AF4/FMR2 family, member 1##AK296243|AFF1|4299|AF4/FMR2 family, member 1##L25050|AFF1|4299|AF4/FMR2 family, member 1##AF177238|AFF1|4299|AF4/FMR2 family, member 1##AF177239|AFF1|4299|AF4/FMR2 family, member 1##BC041901|KLHL8|57563|kelch-like 8 (Drosophila)##BX640727|KLHL8|57563|kelch-like 8 (Drosophila)##BX538173|KLHL8|57563|kelch-like 8 (Drosophila)##NM_020803|KLHL8|57563|kelch-like 8 (Drosophila)##CR749265|KLHL8|57563|kelch-like 8 (Drosophila)##BX640744|KLHL8|57563|kelch-like 8 (Drosophila)##BX647454|KLHL8|57563|kelch-like 8 (Drosophila)##BC041384|KLHL8|57563|kelch-like 8 (Drosophila)	0.0	
chr14	50727402	50727504	reg1030055.p2	4.706	+	AB209277 TSC_hg19_v1_chr14_-_50698111 NM_006939	-29353	-	TSC_hg19_v1_chr14_-_50697940 L13858 HQ258542 AB463275 BC117261 BC143366 BC143367	-29470	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	-144183	-	TSC_hg19_v1_chr14_-_50778948 CU675259 AY757363 BC006117 AK309294 AK022680 AK292627 NM_024884	51427	-	TSC_hg19_v1_chr14_+_50779043 BC011549 NM_001003803 NM_001003805 NM_015684 AF052186 U79253	51588	+	BC104977 NM_004196	135163	-	AB209277|SOS2|6655|son of sevenless homolog 2 (Drosophila)##NM_006939|SOS2|6655|son of sevenless homolog 2 (Drosophila)##L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)##HQ258542|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D##AY757363|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##BC006117|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AK309294|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AK022680|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AK292627|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##NM_024884|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##BC011549|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_001003803|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_001003805|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_015684|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##AF052186|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##U79253|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##BC104977|CDKL1|8814|cyclin-dependent kinase-like 1 (CDC2-related kinase)##NM_004196|CDKL1|8814|cyclin-dependent kinase-like 1 (CDC2-related kinase)	0.925766	CTCF.p2:9:0.926
chr15	78283010	78283123	reg1028491.p1	4.706	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-358286	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-358367	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-569804	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	86887	-	NM_001101404	101860	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	140696	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.0	
chr16	82687714	82687863	reg1029158.p2	4.706	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-27119	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	-27199	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	-27394	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	1153812	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	1153868	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	1244981	+	AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase	0.0	
chr2	147070495	147070619	reg1028275.p2	4.706	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-1792636	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-1792926	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-1795354	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	1531560	+	TSC_hg19_v1_chr2_+_148602300 AK314124	1531778	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	1532088	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.048603	
chr3	16953998	16954178	reg1028124.p1	4.706	+	AB029015 NM_001144382	-27637	+	U65918 U66726 U66078 BC027595 NM_001351	-307122	-	BX648638 AK303026 NM_001190811	-307818	-	BC036392 NM_015184	20493	+	AK310539 NM_001134381	787423	-	D86965 NM_014744	828310	-	AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like##BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5	0.0	
chr6	157041271	157041399	reg1023282.p2	4.706	+	AF190122 NM_015718	-1264299	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1405712	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1405750	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	57728	+	TSC_hg19_v1_chr6_+_157099206 AB587572	57890	+	TSC_hg19_v1_chr6_+_157099283 AF521671	57949	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.0	
chr9	120631715	120631805	reg1026951.p2	4.706	+	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-165073	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	-165146	+	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	-165296	+	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	1499898	-	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	2710593	-	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	2844957	-	U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4##BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9	0.0	
chr9	41973589	41973694	reg1027294.p2	4.706	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-18727	-	BC040528 NM_001113541 NM_015667	-472963	+	BC040528 NM_001113541 NM_015667 NM_001242613	-646262	-	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	394717	+	NM_001099279 NM_199244	743592	+	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	1159846	-	BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2	0.997456	CTCF.p2:-8:0.997
chr11	440330	440471	reg1031709.p2	4.705	+	BC025953 AK025099 AK172830 NM_001135053 NM_021805 AK093427	-23011	-	BC106007 NM_001135054 TSC_hg19_v1_chr11_-_415025	-25396	-	AF053719 TSC_hg19_v1_chr11_+_394242 DQ891692 DQ894875 CU674026	-46136	+	BC144415 AK026923 TSC_hg19_v1_chr11_-_441974 AK303642 BC128557	1571	-	AK074088 TSC_hg19_v1_chr11_-_442005 AK316479 NM_001012302	1603	-	TSC_hg19_v1_chr11_+_450299 BC001210 NM_030783	9896	+	BC025953|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK025099|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK172830|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_001135053|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_021805|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AK093427|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##BC106007|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##NM_001135054|SIGIRR|59307|single immunoglobulin and toll-interleukin 1 receptor (TIR) domain##AF053719|PKP3|11187|plakophilin 3##DQ891692|PKP3|11187|plakophilin 3##DQ894875|PKP3|11187|plakophilin 3##BC144415|ANO9|338440|anoctamin 9##AK026923|ANO9|338440|anoctamin 9##AK303642|ANO9|338440|anoctamin 9##BC128557|ANO9|338440|anoctamin 9##AK074088|ANO9|338440|anoctamin 9##AK316479|ANO9|338440|anoctamin 9##NM_001012302|ANO9|338440|anoctamin 9##BC001210|PTDSS2|81490|phosphatidylserine synthase 2##NM_030783|PTDSS2|81490|phosphatidylserine synthase 2	0.908189	CTCF.p2:-35:0.908
chr1	238078806	238078928	reg1031022.p1	4.705	+	AK314151 NM_021186	-24646	-	NM_001035 X98330 Y08218	-873094	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-1120032	+	TSC_hg19_v1_chr1_+_239550016 AK056349	1471075	+	AF279779 NM_000740	1713505	+	TSC_hg19_v1_chr1_+_240255182 NM_020066	2176310	+	AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_020066|FMN2|56776|formin 2	0.0	
chr1	238402147	238402242	reg1024704.p1	4.705	+	AK314151 NM_021186	-347973	-	NM_001035 X98330 Y08218	-1196421	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-1443359	+	TSC_hg19_v1_chr1_+_239550016 AK056349	1147748	+	AF279779 NM_000740	1390178	+	TSC_hg19_v1_chr1_+_240255182 NM_020066	1852983	+	AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_020066|FMN2|56776|formin 2	0.999687	CTCF.p2:-15:1.000
chr6	111577997	111578132	reg1032909.p1	4.705	+	AB057445 NM_018593 BC066985 TSC_hg19_v1_chr6_+_111408810	-169269	+	TSC_hg19_v1_chr6_+_111408673 AK126183 BC034031	-169388	+	AK292165 TSC_hg19_v1_chr6_+_111303240 AK024740 AK301662 AL833613 BC005347 BC035314 NM_032194 CU690066	-274790	+	NM_153369 TSC_hg19_v1_chr6_+_111580541 AK093136 AX747946 AK292735 AK315016	2459	+	TSC_hg19_v1_chr6_+_111580568 BC036115	2508	+	BC038986 AF303220 AF157476 AF179428 AF179429 TSC_hg19_v1_chr6_-_111804167	226084	-	AB057445|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##NM_018593|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC066985|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##AK126183|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC034031|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##AK292165|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK024740|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AK301662|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##AL833613|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC005347|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##BC035314|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##NM_032194|RPF2|84154|ribosome production factor 2 homolog (S. cerevisiae)##NM_153369|KIAA1919|91749|KIAA1919##AK093136|KIAA1919|91749|KIAA1919##AK292735|KIAA1919|91749|KIAA1919##AK315016|KIAA1919|91749|KIAA1919##BC036115|KIAA1919|91749|KIAA1919##AF303220|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF157476|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179428|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179429|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)	0.94217	CTCF.p2:-8:0.942
chr9	111955195	111955302	reg1026794.p1	4.705	+	TSC_hg19_v1_chr9_-_111929489 AF155065 NM_014334	-25719	-	TSC_hg19_v1_chr9_-_111882212 BC142984 AF153415 NM_032012	-73028	-	TSC_hg19_v1_chr9_-_111882206 AK299952	-73043	-	TSC_hg19_v1_chr9_-_112083007 AF153416 AF153418 NM_018424 NM_019114	127764	-	TSC_hg19_v1_chr9_-_112083330 AB032179	128042	-	AK296265 AK296388 AK316118 NM_001145371 NM_001145372	235965	-	AF155065|C9orf4|23732|chromosome 9 open reading frame 4##NM_014334|C9orf4|23732|chromosome 9 open reading frame 4##AF153415|C9orf5|23731|chromosome 9 open reading frame 5##NM_032012|C9orf5|23731|chromosome 9 open reading frame 5##AK299952|C9orf5|23731|chromosome 9 open reading frame 5##AF153416|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF153418|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_018424|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_019114|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AB032179|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3	0.944259	CTCF.p2:-37:0.944
chrX	48828873	48829023	reg1030334.p2	4.705	+	BC045659 NM_004979 TSC_hg19_v1_chrX_-_48828252	-697	-	TSC_hg19_v1_chrX_-_48815644 NM_001136159	-13304	-	TSC_hg19_v1_chrX_-_48815601 AK294590	-13341	-	TSC_hg19_v1_chrX_-_48858674 AB032993 AB527837 AK292158 BC101544 BC101546 BX647801 BX647804 NM_020137 NM_207672	29700	-	AB527281 EU446500 EU831602 EU831689 AK313540 BC001532 TSC_hg19_v1_chrX_-_48900884	71878	-	TSC_hg19_v1_chrX_-_48900948 AL161985 X96717 BC026027 NM_006521	72012	-	BC045659|KCND1|3750|potassium voltage-gated channel, Shal-related subfamily, member 1##NM_004979|KCND1|3750|potassium voltage-gated channel, Shal-related subfamily, member 1##NM_001136159|OTUD5|55593|OTU domain containing 5##AK294590|OTUD5|55593|OTU domain containing 5##AB032993|GRIPAP1|56850|GRIP1 associated protein 1##AK292158|GRIPAP1|56850|GRIP1 associated protein 1##BC101544|GRIPAP1|56850|GRIP1 associated protein 1##BC101546|GRIPAP1|56850|GRIP1 associated protein 1##BX647801|GRIPAP1|56850|GRIP1 associated protein 1##BX647804|GRIPAP1|56850|GRIP1 associated protein 1##NM_020137|GRIPAP1|56850|GRIP1 associated protein 1##NM_207672|GRIPAP1|56850|GRIP1 associated protein 1##EU446500|TFE3|7030|transcription factor binding to IGHM enhancer 3##EU831602|TFE3|7030|transcription factor binding to IGHM enhancer 3##EU831689|TFE3|7030|transcription factor binding to IGHM enhancer 3##AK313540|TFE3|7030|transcription factor binding to IGHM enhancer 3##BC001532|TFE3|7030|transcription factor binding to IGHM enhancer 3##AL161985|TFE3|7030|transcription factor binding to IGHM enhancer 3##X96717|TFE3|7030|transcription factor binding to IGHM enhancer 3##BC026027|TFE3|7030|transcription factor binding to IGHM enhancer 3##NM_006521|TFE3|7030|transcription factor binding to IGHM enhancer 3	0.443787	CTCF.p2:-8:0.444
chr10	57500666	57500755	reg1026591.p1	4.704	+	NM_001190478 TSC_hg19_v1_chr10_+_57358800	-141936	+	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	-939712	-	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-2969284	-	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	620304	-	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	620316	-	TSC_hg19_v1_chr10_-_60027655 BC016612 BC065709 NM_152230	2526951	-	NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor##BC016612|IPMK|253430|inositol polyphosphate multikinase##BC065709|IPMK|253430|inositol polyphosphate multikinase##NM_152230|IPMK|253430|inositol polyphosphate multikinase	0.996248	CTCF.p2:11:0.996
chr3	23987927	23988108	reg1030922.p2	4.704	+	TSC_hg19_v1_chr3_+_23987516 AK301925 NM_001145425	-455	+	TSC_hg19_v1_chr3_+_23986776 NM_005126 D16815 AK313464 BC045613 BC070035	-1202	+	NM_001253380 AY347528 L25899 AB529129 BT019672 CU677095 CU687134	-28745	+	GQ456948 GQ456949 GQ869479 GQ919288 AY286469 AY286468 AY286465 AY286471 TSC_hg19_v1_chr3_-_24536294 AY286467 AY286466 AK096628 M26747 NM_000461 NM_001128176 NM_001128177 NM_001252634 X04707	548227	-	AY286470 TSC_hg19_v1_chr3_-_24536493	548460	-	TSC_hg19_v1_chr3_+_25469751 AF157483 NM_016152	1481742	+	AK301925|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001145425|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_005126|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##D16815|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##AK313464|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##BC045613|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##BC070035|NR1D2|9975|nuclear receptor subfamily 1, group D, member 2##NM_001253380|RPL15|6138|ribosomal protein L15##AY347528|RPL15|6138|ribosomal protein L15##L25899|RPL15|6138|ribosomal protein L15##BT019672|RPL15|6138|ribosomal protein L15##GQ456948|THRB|7068|thyroid hormone receptor, beta##GQ456949|THRB|7068|thyroid hormone receptor, beta##GQ869479|THRB|7068|thyroid hormone receptor, beta##GQ919288|THRB|7068|thyroid hormone receptor, beta##AY286469|THRB|7068|thyroid hormone receptor, beta##AY286468|THRB|7068|thyroid hormone receptor, beta##AY286465|THRB|7068|thyroid hormone receptor, beta##AY286471|THRB|7068|thyroid hormone receptor, beta##AY286467|THRB|7068|thyroid hormone receptor, beta##AY286466|THRB|7068|thyroid hormone receptor, beta##AK096628|THRB|7068|thyroid hormone receptor, beta##M26747|THRB|7068|thyroid hormone receptor, beta##NM_000461|THRB|7068|thyroid hormone receptor, beta##NM_001128176|THRB|7068|thyroid hormone receptor, beta##NM_001128177|THRB|7068|thyroid hormone receptor, beta##NM_001252634|THRB|7068|thyroid hormone receptor, beta##X04707|THRB|7068|thyroid hormone receptor, beta##AY286470|THRB|7068|thyroid hormone receptor, beta##AF157483|RARB|5915|retinoic acid receptor, beta##NM_016152|RARB|5915|retinoic acid receptor, beta	0.0	
chr4	123749125	123749232	reg1026871.p1	4.704	+	TSC_hg19_v1_chr4_+_123747985 M27968	-1212	+	TSC_hg19_v1_chr4_+_123747833 J04513 NM_002006 BC111737 BC118573 BC118654	-1334	+	AK123553 NM_001178007 NM_152618 BC055426 TSC_hg19_v1_chr4_+_123653916 BX538148	-95273	+	TSC_hg19_v1_chr4_-_123843731 DQ893139 DQ896423 BC009842 AB209758 AK291871 AF019633 NM_007083	94583	-	AF019632 AK294450 NM_198041	94962	-	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	95074	+	M27968|FGF2|2247|fibroblast growth factor 2 (basic)##J04513|FGF2|2247|fibroblast growth factor 2 (basic)##NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)##BC111737|FGF2|2247|fibroblast growth factor 2 (basic)##AK123553|BBS12|166379|Bardet-Biedl syndrome 12##NM_001178007|BBS12|166379|Bardet-Biedl syndrome 12##NM_152618|BBS12|166379|Bardet-Biedl syndrome 12##BC055426|BBS12|166379|Bardet-Biedl syndrome 12##BX538148|BBS12|166379|Bardet-Biedl syndrome 12##DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AF019632|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK294450|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_198041|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5	0.0	
chr8	103876396	103876577	reg1028727.p1	4.704	+	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	-91	-	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	-127	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	-208554	-	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	156781	+	TSC_hg19_v1_chr8_+_104033310 AK308632 BC010960 X69151 AK000064	156834	+	TSC_hg19_v1_chr8_+_104152984 NM_001024372 NM_024812 BC035038 AK022077 BC011517 AK093819 AF371319 AF371323 DQ893318 DQ896633	276514	+	BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK308632|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC010960|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##X69151|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK000064|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##NM_001024372|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_024812|BAALC|79870|brain and acute leukemia, cytoplasmic##BC035038|BAALC|79870|brain and acute leukemia, cytoplasmic##AK022077|BAALC|79870|brain and acute leukemia, cytoplasmic##BC011517|BAALC|79870|brain and acute leukemia, cytoplasmic##AK093819|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371319|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371323|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ893318|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ896633|BAALC|79870|brain and acute leukemia, cytoplasmic	0.0	
chr1	113584997	113585173	reg1005708.p1	4.703	+	TSC_hg19_v1_chr1_+_113499054 BC023568 BC047723 BC062295 BX648855	-86052	+	TSC_hg19_v1_chr1_-_113498861 AK303603 AJ438943 NM_003051	-86184	-	BC045664 AK094064 NM_001166496 AF239919 AL162079 TSC_hg19_v1_chr1_-_113498818 AK296688 AK312500 BC026317	-86368	-	TSC_hg19_v1_chr1_+_113615809 AK291031 CR936669 AB018349 NM_014813 AL161998	30730	+	TSC_hg19_v1_chr1_+_113615865 BC117368 BC117370 AB527394	30861	+	BC130409 BC144144 NM_001142782 NM_152900	348389	+	BC062295|LOC100506392|100506392|uncharacterized LOC100506392##BX648855|LOC100506392|100506392|uncharacterized LOC100506392##AK303603|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AJ438943|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_003051|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC045664|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK094064|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_001166496|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AF239919|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AL162079|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK296688|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK312500|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC026317|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK291031|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##CR936669|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AB018349|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##NM_014813|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##AL161998|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC117368|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC117370|LRIG2|9860|leucine-rich repeats and immunoglobulin-like domains 2##BC130409|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##BC144144|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_001142782|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3##NM_152900|MAGI3|260425|membrane associated guanylate kinase, WW and PDZ domain containing 3	0.0	
chr1	147196202	147196313	reg1030857.p1	4.703	+	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	-53763	-	NM_004326 Y13620 AK298105 TSC_hg19_v1_chr1_+_147013319	-183006	+	TSC_hg19_v1_chr1_+_146714335 AK298424 AK297135 BC077717 AK293157 BC001171 AF054177 BC043501 BC053354 BC005038	-481893	+	BC013313 NM_181703	36441	-	NM_005266	49226	-	NM_005267	178688	+	AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_004326|BCL9|607|B-cell CLL/lymphoma 9##Y13620|BCL9|607|B-cell CLL/lymphoma 9##AK298424|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK297135|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC077717|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK293157|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC001171|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF054177|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC043501|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC053354|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC005038|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_005266|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_005267|GJA8|2703|gap junction protein, alpha 8, 50kDa	0.0	
chr1	236916997	236917084	reg1026488.p1	4.703	+	AK315250 NM_001103 TSC_hg19_v1_chr1_+_236849798 AK297886 M86406 AB209521 BC051770 BC047901 AB590561 CU690840	-67178	+	BC062442 TSC_hg19_v1_chr1_-_236767817 AK095692 NM_018072	-149227	-	TSC_hg19_v1_chr1_+_236687323 AK296061 BC015818 AB209914	-229711	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	41537	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	41795	+	NM_001035 X98330 Y08218	288733	+	AK315250|ACTN2|88|actinin, alpha 2##NM_001103|ACTN2|88|actinin, alpha 2##AK297886|ACTN2|88|actinin, alpha 2##M86406|ACTN2|88|actinin, alpha 2##AB209521|ACTN2|88|actinin, alpha 2##BC051770|ACTN2|88|actinin, alpha 2##BC047901|ACTN2|88|actinin, alpha 2##BC062442|HEATR1|55127|HEAT repeat containing 1##AK095692|HEATR1|55127|HEAT repeat containing 1##NM_018072|HEATR1|55127|HEAT repeat containing 1##AK296061|LGALS8|3964|lectin, galactoside-binding, soluble, 8##BC015818|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AB209914|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)	0.729945	CTCF.p2:-6:0.673
chr16	30204539	30204640	reg1027395.p1	4.703	+	AF495470 AK096332 TSC_hg19_v1_chr16_+_30194929 AK296207 AK314714 D44497 X89109 U34690 BC126385 BC126387	-9614	+	NM_001193333 NM_007074 TSC_hg19_v1_chr16_+_30194922 BC110374	-9763	+	TSC_hg19_v1_chr16_-_30134584 NM_001040056 NM_001109891 NM_002746	-69972	-	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	604	+	BC022832 NM_001031827 NM_001039182	1037	-	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	5979	+	AF495470|CORO1A|11151|coronin, actin binding protein, 1A##AK096332|CORO1A|11151|coronin, actin binding protein, 1A##AK296207|CORO1A|11151|coronin, actin binding protein, 1A##AK314714|CORO1A|11151|coronin, actin binding protein, 1A##D44497|CORO1A|11151|coronin, actin binding protein, 1A##X89109|CORO1A|11151|coronin, actin binding protein, 1A##U34690|CORO1A|11151|coronin, actin binding protein, 1A##BC126385|CORO1A|11151|coronin, actin binding protein, 1A##BC126387|CORO1A|11151|coronin, actin binding protein, 1A##NM_001193333|CORO1A|11151|coronin, actin binding protein, 1A##NM_007074|CORO1A|11151|coronin, actin binding protein, 1A##BC110374|CORO1A|11151|coronin, actin binding protein, 1A##NM_001040056|MAPK3|5595|mitogen-activated protein kinase 3##NM_001109891|MAPK3|5595|mitogen-activated protein kinase 3##NM_002746|MAPK3|5595|mitogen-activated protein kinase 3##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3	0.0	
chr19	42463805	42463901	reg1027213.p2	4.703	+	TSC_hg19_v1_chr19_-_42463500 NM_006423	-333	-	AF112996 BT019964 CR457214 CR542116 AB590878 AF112202 AJ133534 BC008950 TSC_hg19_v1_chr19_-_42463499	-385	-	NM_199002 TSC_hg19_v1_chr19_+_42388510 BC034013 BC067262	-75367	+	AK295833 TSC_hg19_v1_chr19_-_42498254	34384	-	TSC_hg19_v1_chr19_-_42498383 BC009282 BC009394 BC015566 BC013763 AK307921 AK316069 AK223569 AK293784 AK295078 NM_152296	34519	-	S40369 AJ249209 BC131717 NM_002088	106085	-	NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)##AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)##BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)##CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)##CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)##AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)##AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)##BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)##NM_199002|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC034013|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC067262|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##AK295833|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC009282|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC009394|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC015566|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC013763|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK307921|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK316069|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK223569|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK293784|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK295078|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##NM_152296|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5	0.27185	CTCF.p2:-3:0.272
chr2	107078891	107079009	reg1025202.p2	4.703	+	TSC_hg19_v1_chr2_-_106810781 NM_025076	-268145	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	-268192	-	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	-268205	-	NM_001144013	5850	-	FJ433885 TSC_hg19_v1_chr2_-_107502508	423535	-	AB058780 NM_001142351 TSC_hg19_v1_chr2_-_107502624	423669	-	NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##NM_001144013|RGPD3|653489|RANBP2-like and GRIP domain containing 3##AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	0.578776	CTCF.p2:-6:0.579
chr22	38712682	38712748	reg1025742.p2	4.703	+	TSC_hg19_v1_chr22_-_38669012 BC015489 AB097053 AK309071 AK292652 NM_001195072 NM_012264	-43707	-	TSC_hg19_v1_chr22_-_38668943 CR749859	-43770	-	NM_001195071	-44046	-	BC006490 AB091043 TSC_hg19_v1_chr22_-_38713340 AK223498	576	-	TSC_hg19_v1_chr22_-_38713439 NM_152221	699	-	AB024597 NM_001894	1373	-	BC015489|TMEM184B|25829|transmembrane protein 184B##AB097053|TMEM184B|25829|transmembrane protein 184B##AK309071|TMEM184B|25829|transmembrane protein 184B##AK292652|TMEM184B|25829|transmembrane protein 184B##NM_001195072|TMEM184B|25829|transmembrane protein 184B##NM_012264|TMEM184B|25829|transmembrane protein 184B##CR749859|TMEM184B|25829|transmembrane protein 184B##NM_001195071|TMEM184B|25829|transmembrane protein 184B##BC006490|CSNK1E|1454|casein kinase 1, epsilon##AB091043|CSNK1E|1454|casein kinase 1, epsilon##AK223498|CSNK1E|1454|casein kinase 1, epsilon##NM_152221|CSNK1E|1454|casein kinase 1, epsilon##AB024597|CSNK1E|1454|casein kinase 1, epsilon##NM_001894|CSNK1E|1454|casein kinase 1, epsilon	0.074951	
chr3	158257341	158257478	reg1030284.p2	4.703	+	TSC_hg19_v1_chr3_+_157827937 AK300388	-429469	+	TSC_hg19_v1_chr3_+_157827910 AK290334 BC006982 NM_016625 AF208853 BC010357	-429518	+	HQ258019 AJ002367 TSC_hg19_v1_chr3_-_157823847 BC008829 NM_001163678 NM_003030 NM_006884	-433526	-	NM_001130156 NM_001130157 NM_001195432 NM_001195433 NM_001195434 NM_022443 AK056948 AK315402 BC095437 BX647666 AY848700 AY848701 AY848702 BC007045 L49054 AK297488 AK096889	31588	+	TSC_hg19_v1_chr3_+_158362361 AF309777 AF367998 AK000780 NM_024996 BC049210	104920	+	TSC_hg19_v1_chr3_+_158362373 AK315031	104972	+	AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1##AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1##NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1##AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1##HQ258019|SHOX2|6474|short stature homeobox 2##AJ002367|SHOX2|6474|short stature homeobox 2##BC008829|SHOX2|6474|short stature homeobox 2##NM_001163678|SHOX2|6474|short stature homeobox 2##NM_003030|SHOX2|6474|short stature homeobox 2##NM_006884|SHOX2|6474|short stature homeobox 2##NM_001130156|MLF1|4291|myeloid leukemia factor 1##NM_001130157|MLF1|4291|myeloid leukemia factor 1##NM_001195432|MLF1|4291|myeloid leukemia factor 1##NM_001195433|MLF1|4291|myeloid leukemia factor 1##NM_001195434|MLF1|4291|myeloid leukemia factor 1##NM_022443|MLF1|4291|myeloid leukemia factor 1##AK056948|MLF1|4291|myeloid leukemia factor 1##AK315402|MLF1|4291|myeloid leukemia factor 1##BC095437|MLF1|4291|myeloid leukemia factor 1##BX647666|MLF1|4291|myeloid leukemia factor 1##AY848700|MLF1|4291|myeloid leukemia factor 1##AY848701|MLF1|4291|myeloid leukemia factor 1##AY848702|MLF1|4291|myeloid leukemia factor 1##BC007045|MLF1|4291|myeloid leukemia factor 1##L49054|MLF1|4291|myeloid leukemia factor 1##AK297488|MLF1|4291|myeloid leukemia factor 1##AK096889|MLF1|4291|myeloid leukemia factor 1##AF309777|GFM1|85476|G elongation factor, mitochondrial 1##AF367998|GFM1|85476|G elongation factor, mitochondrial 1##AK000780|GFM1|85476|G elongation factor, mitochondrial 1##NM_024996|GFM1|85476|G elongation factor, mitochondrial 1##BC049210|GFM1|85476|G elongation factor, mitochondrial 1##AK315031|GFM1|85476|G elongation factor, mitochondrial 1	0.998182	CTCF.p2:-6:0.998
chr9	112731513	112731649	reg1027133.p1	4.703	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	-188966	+	BC039306 NM_001037293 AK095003	-328512	+	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	-470992	-	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	79328	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	79382	+	NM_001136562 AK300427	156211	+	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2	0.0	
chr14	103860485	103860608	reg1025515.p1	4.702	+	TSC_hg19_v1_chr14_+_103851775 AF465413 BC024773 U64205	-8660	+	TSC_hg19_v1_chr14_+_103851772 BX161395	-8776	+	TSC_hg19_v1_chr14_+_103851700 NM_001128918 NM_001128919 NM_001128920 NM_001128921 NM_002376	-8843	+	CR542268 CU676412 M16364 TSC_hg19_v1_chr14_-_103988931	128334	-	M16451 L47647 TSC_hg19_v1_chr14_-_103989168 BC004914 BC019259 BC008323 BC001190 BC019281 BC010002 AK290101 AK312282 AK298198	128597	-	NM_001823 TSC_hg19_v1_chr14_-_103989206	128656	-	AF465413|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##BC024773|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##U64205|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##BX161395|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128918|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128919|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128920|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_001128921|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##NM_002376|MARK3|4140|MAP/microtubule affinity-regulating kinase 3##CR542268|CKB|1152|creatine kinase, brain##M16364|CKB|1152|creatine kinase, brain##M16451|CKB|1152|creatine kinase, brain##L47647|CKB|1152|creatine kinase, brain##BC004914|CKB|1152|creatine kinase, brain##BC019259|CKB|1152|creatine kinase, brain##BC008323|CKB|1152|creatine kinase, brain##BC001190|CKB|1152|creatine kinase, brain##BC019281|CKB|1152|creatine kinase, brain##BC010002|CKB|1152|creatine kinase, brain##AK290101|CKB|1152|creatine kinase, brain##AK312282|CKB|1152|creatine kinase, brain##AK298198|CKB|1152|creatine kinase, brain##NM_001823|CKB|1152|creatine kinase, brain	0.0	
chr14	74244283	74244390	reg1027263.p1	4.702	+	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	-17371	-	BC015668 TSC_hg19_v1_chr14_-_74226640	-17698	-	CR457112 BC039577 AK290980 TSC_hg19_v1_chr14_-_74181085 AF320308 BC007712 NM_006029	-63575	-	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	9583	-	TSC_hg19_v1_chr14_+_74318554 NM_001146154 NM_001146155 AY346133 AY424308 AK311280 NM_152444 BX641118 BC059364 AK309188 AK096410 BC034973	74253	+	NM_001242924 NM_001242926 NM_001242927 NM_001242928 NM_021188 AK299138	108982	+	AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##BC015668|C14orf43|91748|chromosome 14 open reading frame 43##CR457112|PNMA1|9240|paraneoplastic antigen MA1##BC039577|PNMA1|9240|paraneoplastic antigen MA1##AK290980|PNMA1|9240|paraneoplastic antigen MA1##AF320308|PNMA1|9240|paraneoplastic antigen MA1##BC007712|PNMA1|9240|paraneoplastic antigen MA1##NM_006029|PNMA1|9240|paraneoplastic antigen MA1##NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43##NM_001146154|PTGR2|145482|prostaglandin reductase 2##NM_001146155|PTGR2|145482|prostaglandin reductase 2##AY346133|PTGR2|145482|prostaglandin reductase 2##AY424308|PTGR2|145482|prostaglandin reductase 2##AK311280|PTGR2|145482|prostaglandin reductase 2##NM_152444|PTGR2|145482|prostaglandin reductase 2##BX641118|PTGR2|145482|prostaglandin reductase 2##BC059364|PTGR2|145482|prostaglandin reductase 2##AK309188|PTGR2|145482|prostaglandin reductase 2##AK096410|PTGR2|145482|prostaglandin reductase 2##NM_001242924|ZNF410|57862|zinc finger protein 410##NM_001242926|ZNF410|57862|zinc finger protein 410##NM_001242927|ZNF410|57862|zinc finger protein 410##NM_001242928|ZNF410|57862|zinc finger protein 410##NM_021188|ZNF410|57862|zinc finger protein 410##AK299138|ZNF410|57862|zinc finger protein 410	0.984868	CTCF.p2:14:0.985
chr15	62841684	62841804	reg1027651.p1	4.702	+	TSC_hg19_v1_chr15_+_62682748 AB621808	-159026	+	NM_001007595	-384263	-	NM_207322 AF504646	-482556	+	AF402000 NM_015059	97765	+	TSC_hg19_v1_chr15_+_63050761 BX648144 BX648146	209030	+	TSC_hg19_v1_chr15_+_63334949 NM_000366 NM_001018004 NM_001018005 NM_001018006 NM_001018007 NM_001018020 AK092051 AX747334 BC007433 AK057989 AK299387 AK129882 AK131384 AK309170 AL050179 M19713 DQ893259 DQ896588 CU675655 AY640414 AY640415	493158	+	AB621808|TLN2|83660|talin 2##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B##NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF402000|TLN2|83660|talin 2##NM_015059|TLN2|83660|talin 2##BX648144|TLN2|83660|talin 2##BX648146|TLN2|83660|talin 2##NM_000366|TPM1|7168|tropomyosin 1 (alpha)##NM_001018004|TPM1|7168|tropomyosin 1 (alpha)##NM_001018005|TPM1|7168|tropomyosin 1 (alpha)##NM_001018006|TPM1|7168|tropomyosin 1 (alpha)##NM_001018007|TPM1|7168|tropomyosin 1 (alpha)##NM_001018020|TPM1|7168|tropomyosin 1 (alpha)##AK092051|TPM1|7168|tropomyosin 1 (alpha)##BC007433|TPM1|7168|tropomyosin 1 (alpha)##AK057989|TPM1|7168|tropomyosin 1 (alpha)##AK299387|TPM1|7168|tropomyosin 1 (alpha)##AK129882|TPM1|7168|tropomyosin 1 (alpha)##AK131384|TPM1|7168|tropomyosin 1 (alpha)##AK309170|TPM1|7168|tropomyosin 1 (alpha)##AL050179|TPM1|7168|tropomyosin 1 (alpha)##M19713|TPM1|7168|tropomyosin 1 (alpha)##DQ893259|TPM1|7168|tropomyosin 1 (alpha)##DQ896588|TPM1|7168|tropomyosin 1 (alpha)##AY640414|TPM1|7168|tropomyosin 1 (alpha)##AY640415|TPM1|7168|tropomyosin 1 (alpha)	0.0	
chr16	14395238	14395419	reg1001347.p2	4.702	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-101130	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-114810	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-230242	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	328700	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	328805	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	331411	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.0	
chr4	148905275	148905385	reg1028423.p1	4.702	+	AB050785 BC128055 NM_024605 BC126899 BC109029 BC109030	-251873	+	TSC_hg19_v1_chr4_+_148653238 AK123785	-252079	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	-300066	-	TSC_hg19_v1_chr4_-_149357955 AB587357	452652	-	TSC_hg19_v1_chr4_-_149363305 BC111758	458009	-	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	458254	-	AB050785|ARHGAP10|79658|Rho GTPase activating protein 10##BC128055|ARHGAP10|79658|Rho GTPase activating protein 10##NM_024605|ARHGAP10|79658|Rho GTPase activating protein 10##BC126899|ARHGAP10|79658|Rho GTPase activating protein 10##BC109029|ARHGAP10|79658|Rho GTPase activating protein 10##BC109030|ARHGAP10|79658|Rho GTPase activating protein 10##AK123785|ARHGAP10|79658|Rho GTPase activating protein 10##BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	0.921014	CTCF.p2:-3:0.921
chr8	136840904	136841008	reg1025850.p1	4.702	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-370755	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-371298	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1115682	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2668150	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	3085288	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3874326	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.366314	CTCF.p2:0:0.366
chr9	34253173	34253302	reg1005321.p2	4.702	+	TSC_hg19_v1_chr9_+_34179058 AF222043 BC098141 BC098316 BC099726 BC100668	-74155	+	AK223235 AK309329 TSC_hg19_v1_chr9_+_34179047	-74190	+	TSC_hg19_v1_chr9_+_34179039 AK074995 BC020950 AK074745 AK295482	-74197	+	TSC_hg19_v1_chr9_-_34329214 NM_194313 AK310014	75974	-	NM_001161 NM_001244390 NM_147172 NM_147173 TSC_hg19_v1_chr9_+_34329566 AK310574 U30313	76301	+	TSC_hg19_v1_chr9_-_34376864 BC070098 NM_020702	123696	-	AF222043|UBAP1|51271|ubiquitin associated protein 1##BC098141|UBAP1|51271|ubiquitin associated protein 1##BC098316|UBAP1|51271|ubiquitin associated protein 1##BC099726|UBAP1|51271|ubiquitin associated protein 1##BC100668|UBAP1|51271|ubiquitin associated protein 1##AK223235|UBAP1|51271|ubiquitin associated protein 1##AK309329|UBAP1|51271|ubiquitin associated protein 1##AK074995|UBAP1|51271|ubiquitin associated protein 1##BC020950|UBAP1|51271|ubiquitin associated protein 1##AK074745|UBAP1|51271|ubiquitin associated protein 1##AK295482|UBAP1|51271|ubiquitin associated protein 1##NM_194313|KIF24|347240|kinesin family member 24##AK310014|KIF24|347240|kinesin family member 24##NM_001161|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_001244390|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_147172|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_147173|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##U30313|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##BC070098|KIAA1161|57462|KIAA1161##NM_020702|KIAA1161|57462|KIAA1161	0.03817	
chr12	118454283	118454454	reg1029329.p1	4.701	+	NM_173598	-48341	-	AK294435 AF446135 EU753241 U17327 AK307481 NM_000620 NM_001204218	-654860	-	AF446136 TSC_hg19_v1_chr12_-_117799037	-655347	-	NM_001130112 NM_001206801 NM_007370 NM_181578 TSC_hg19_v1_chr12_+_118454507 AK291107 AK094575 AK290685 BC001866 BC013961 AB208992 BC020440 L07540 AB464140 CU674898 CR407651	200	+	AK310892 TSC_hg19_v1_chr12_-_118498977 BC015887 AK298513 AF229181 NM_018639	44567	-	TSC_hg19_v1_chr12_-_118499892 AK295555	45567	-	NM_173598|KSR2|283455|kinase suppressor of ras 2##AK294435|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446135|NOS1|4842|nitric oxide synthase 1 (neuronal)##EU753241|NOS1|4842|nitric oxide synthase 1 (neuronal)##U17327|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK307481|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_000620|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204218|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446136|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001130112|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_001206801|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_007370|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_181578|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK291107|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK094575|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK290685|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC001866|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC013961|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AB208992|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC020440|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##L07540|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##CR407651|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK310892|WSB2|55884|WD repeat and SOCS box containing 2##BC015887|WSB2|55884|WD repeat and SOCS box containing 2##AK298513|WSB2|55884|WD repeat and SOCS box containing 2##AF229181|WSB2|55884|WD repeat and SOCS box containing 2##NM_018639|WSB2|55884|WD repeat and SOCS box containing 2##AK295555|WSB2|55884|WD repeat and SOCS box containing 2	0.027345	
chr20	24686273	24686415	reg1025540.p1	4.701	+	TSC_hg19_v1_chr20_+_24450295 BC030637	-236042	+	AK024282 NM_024893	-236510	+	BC040904 NM_178311	-716929	-	TSC_hg19_v1_chr20_+_24929865 NM_003650	243519	+	TSC_hg19_v1_chr20_+_24929907 AF031824 BC015507 AB015225 CU677327 BT009825 AF036342 CR541860 CR541878	243678	+	TSC_hg19_v1_chr20_-_24973355 CU678464 BC003501	286986	-	BC030637|SYNDIG1|79953|synapse differentiation inducing 1##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1##BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_003650|CST7|8530|cystatin F (leukocystatin)##AF031824|CST7|8530|cystatin F (leukocystatin)##BC015507|CST7|8530|cystatin F (leukocystatin)##AB015225|CST7|8530|cystatin F (leukocystatin)##BT009825|CST7|8530|cystatin F (leukocystatin)##AF036342|CST7|8530|cystatin F (leukocystatin)##CR541860|CST7|8530|cystatin F (leukocystatin)##CR541878|CST7|8530|cystatin F (leukocystatin)##BC003501|C20orf3|57136|chromosome 20 open reading frame 3	0.0	
chr6	73349843	73349960	reg1029806.p1	4.701	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	-17840	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	-18012	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	-18331	+	BC004267 NM_001126063	585273	-	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	622965	-	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	623072	+	AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC004267|KHDC1L|100129128|KH homology domain containing 1-like##NM_001126063|KHDC1L|100129128|KH homology domain containing 1-like##BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1	0.0	
chr8	27224222	27224403	reg1026734.p2	4.701	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-41235	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-41260	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-41295	+	AK314787 U62431 NM_000742	112459	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	124346	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	247893	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	0.087304	
chr9	139440727	139440874	reg1030703.p1	4.701	+	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	-550	-	TSC_hg19_v1_chr9_-_139378220 AB593115	-62558	-	BC036221 NM_152571 AK055336	-62830	+	NM_016215 AL512735 AY358903 BC088371 AY358902	116601	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	119415	+	BC012377 TSC_hg19_v1_chr9_+_139560248	119471	+	AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7##BC012377|EGFL7|51162|EGF-like-domain, multiple 7	0.0	
chr19	46386540	46386720	reg1005546.p1	4.700	+	BC016024 NM_004497 TSC_hg19_v1_chr19_+_46367583 AK223473 AB464526 BT006720 CU677549 L12141	-19015	+	AF049526 TSC_hg19_v1_chr19_-_46366406 Y10931 AB210010 BC030214 AK300252 BX649165 AK130602 NM_004819	-20186	-	BC057785 AB587490 AM393487 BC146683 BC136351 BC136352 BC144018 AK098837 AK223347 AL136761 NM_030785	-68112	-	AK223622 TSC_hg19_v1_chr19_-_46389398 AK315060 BC038222 NM_015649 AY278022 BC039002	2732	-	TSC_hg19_v1_chr19_-_46405872 BC044311 NM_001012643	19276	-	HQ258065 BC042883 NM_001029861 BC117484 BC117486	31409	-	BC016024|FOXA3|3171|forkhead box A3##NM_004497|FOXA3|3171|forkhead box A3##AK223473|FOXA3|3171|forkhead box A3##BT006720|FOXA3|3171|forkhead box A3##L12141|FOXA3|3171|forkhead box A3##AF049526|SYMPK|8189|symplekin##Y10931|SYMPK|8189|symplekin##AB210010|SYMPK|8189|symplekin##BC030214|SYMPK|8189|symplekin##AK300252|SYMPK|8189|symplekin##BX649165|SYMPK|8189|symplekin##AK130602|SYMPK|8189|symplekin##NM_004819|SYMPK|8189|symplekin##BC057785|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AM393487|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC146683|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC136351|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC136352|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##BC144018|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AK098837|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AK223347|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AL136761|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##NM_030785|RSPH6A|81492|radial spoke head 6 homolog A (Chlamydomonas)##AK223622|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##AK315060|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##BC038222|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##NM_015649|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##AY278022|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##BC039002|IRF2BP1|26145|interferon regulatory factor 2 binding protein 1##BC044311|MYPOP|339344|Myb-related transcription factor, partner of profilin##NM_001012643|MYPOP|339344|Myb-related transcription factor, partner of profilin##HQ258065|NANOS2|339345|nanos homolog 2 (Drosophila)##BC042883|NANOS2|339345|nanos homolog 2 (Drosophila)##NM_001029861|NANOS2|339345|nanos homolog 2 (Drosophila)##BC117484|NANOS2|339345|nanos homolog 2 (Drosophila)##BC117486|NANOS2|339345|nanos homolog 2 (Drosophila)	0.0	
chr20	37521301	37521482	reg1002353.p2	4.700	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	-87037	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	-144279	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-168232	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	33598	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	33677	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	69598	+	AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35	0.0	
chr2	237454551	237454674	reg1027733.p2	4.700	+	BC043504 NM_024726 AK294105 BC028699	-38480	-	NM_212556 BX647589	-281618	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-377980	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	23816	+	BC036499 NM_006710 NM_198189	539406	+	TSC_hg19_v1_chr2_-_237994424 AK056246	539825	-	BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037	0.0	
chr5	116017578	116017687	reg1022938.p2	4.700	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-107118	-	TSC_hg19_v1_chr5_+_115898220 D28352	-119408	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-596911	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2306606	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2389179	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2389533	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr6	16541562	16541665	reg1025601.p2	4.700	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-302762	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-398303	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-412176	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	220084	-	NM_001190766	560875	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	740241	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.027445	
chr7	21466757	21466937	reg1027895.p3	4.700	+	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	-640313	-	TSC_hg19_v1_chr7_-_20826429 AK299947	-640419	-	TSC_hg19_v1_chr7_-_20825382 AB464710	-641465	-	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	972	+	AB591008 TSC_hg19_v1_chr7_+_21468356	1477	+	AJ320497 NM_003777	115985	+	AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor##AK299947|SP8|221833|Sp8 transcription factor##AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11	0.0	
chr9	4679577	4679686	reg1025015.p2	4.700	+	AK295831 NM_001039395	-12962	-	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	-17320	+	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	-189194	+	TSC_hg19_v1_chr9_+_4679596 AK000497 NM_017913 AK000646 AK225510 BC014133 CU680796	30	+	NM_001199856 AK124824	46606	-	TSC_hg19_v1_chr9_-_4741050 AF086913 AF100785	61427	-	AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK000497|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##NM_017913|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK000646|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK225510|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##BC014133|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##NM_001199856|AK3|50808|adenylate kinase 3##AK124824|AK3|50808|adenylate kinase 3##AF086913|AK3|50808|adenylate kinase 3##AF100785|AK3|50808|adenylate kinase 3	0.011705	
chrY	1550750	1550905	reg1030053.p1	4.700	+	AK301844 NM_001173473	-28176	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-29026	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-89858	-	BC043610 GQ280263 NM_178129 AK126147	55211	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	109702	+	NM_004043 U11090	113520	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr11	125594186	125594278	reg1031334.p2	4.699	+	AB451476 CU677049 M82967 M82968 AK223335 BC014588 NM_001612 NM_020069 NM_020107 NM_020108	-43499	-	AK292549 NM_001274 BC017575	-98003	+	TSC_hg19_v1_chr11_+_125495874 BC004202 AK293143 AK299783	-98355	+	BC039863 NM_138294 AF462605 BC107044	21957	+	BC137190 BC137193 BC144526 AY358105 NM_212555	54476	-	EF426753 NM_001129883 EU703625	63793	+	AB451476|ACRV1|56|acrosomal vesicle protein 1##M82967|ACRV1|56|acrosomal vesicle protein 1##M82968|ACRV1|56|acrosomal vesicle protein 1##AK223335|ACRV1|56|acrosomal vesicle protein 1##BC014588|ACRV1|56|acrosomal vesicle protein 1##NM_001612|ACRV1|56|acrosomal vesicle protein 1##NM_020069|ACRV1|56|acrosomal vesicle protein 1##NM_020107|ACRV1|56|acrosomal vesicle protein 1##NM_020108|ACRV1|56|acrosomal vesicle protein 1##AK292549|CHEK1|1111|checkpoint kinase 1##NM_001274|CHEK1|1111|checkpoint kinase 1##BC017575|CHEK1|1111|checkpoint kinase 1##BC004202|CHEK1|1111|checkpoint kinase 1##AK293143|CHEK1|1111|checkpoint kinase 1##AK299783|CHEK1|1111|checkpoint kinase 1##BC039863|PATE1|160065|prostate and testis expressed 1##NM_138294|PATE1|160065|prostate and testis expressed 1##AF462605|PATE1|160065|prostate and testis expressed 1##BC107044|PATE1|160065|prostate and testis expressed 1##BC137190|PATE2|399967|prostate and testis expressed 2##BC137193|PATE2|399967|prostate and testis expressed 2##BC144526|PATE2|399967|prostate and testis expressed 2##AY358105|PATE2|399967|prostate and testis expressed 2##NM_212555|PATE2|399967|prostate and testis expressed 2##EF426753|PATE3|100169851|prostate and testis expressed 3##NM_001129883|PATE3|100169851|prostate and testis expressed 3##EU703625|PATE3|100169851|prostate and testis expressed 3	0.931593	CTCF.p2:-4:0.932
chr12	2468255	2468350	reg1027946.p1	4.699	+	AB209016 AJ224873 AY830711 AY830712 AY830713 Z34809 Z34810 Z34811 Z34812 Z34813 Z34814 Z34815 Z34816 Z34817 Z34818 Z34819 Z34820 Z34821 Z34822 Z74996 TSC_hg19_v1_chr12_+_2162753	-305574	+	TSC_hg19_v1_chr12_+_2162452 NM_000719 NM_001129827 NM_001129829 NM_001129830 NM_001129831 NM_001129832 NM_001129833 NM_001129834 NM_001129835 NM_001129836 NM_001129837 NM_001129838 NM_001129839 NM_001129840 NM_001129841 NM_001129842 NM_001129843 NM_001129844 NM_001129846 NM_001167623 NM_001167624 NM_001167625 NM_199460 AK309111 AF465484 AK308652 BC146846	-305808	+	TSC_hg19_v1_chr12_-_2113622 AB463561 AK301109 AK056200 AK299203 BC043437 AY146652 NM_152640	-354631	-	TSC_hg19_v1_chr12_+_2904161 NM_002014 AK313918 BC001786 M88279 BC007924	435852	+	TSC_hg19_v1_chr12_+_2904310 AB385011 CU674888 DQ893668 DQ895800	436000	+	NM_018463 TSC_hg19_v1_chr12_+_2921842 AK130319 AK297189 AK291110 AK300905 AK027483 BC006552 BC013399 DQ892711 DQ895963 CU675449 AY599883	453554	+	AB209016|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AJ224873|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830711|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830712|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830713|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34809|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34810|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34811|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34812|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34813|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34814|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34815|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34816|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34817|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34818|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34819|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34820|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34821|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34822|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z74996|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK301109|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK056200|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK299203|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC043437|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AY146652|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_152640|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_002014|FKBP4|2288|FK506 binding protein 4, 59kDa##AK313918|FKBP4|2288|FK506 binding protein 4, 59kDa##BC001786|FKBP4|2288|FK506 binding protein 4, 59kDa##M88279|FKBP4|2288|FK506 binding protein 4, 59kDa##BC007924|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ893668|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ895800|FKBP4|2288|FK506 binding protein 4, 59kDa##NM_018463|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK130319|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK297189|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK291110|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK300905|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK027483|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC006552|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC013399|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ892711|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ895963|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AY599883|ITFG2|55846|integrin alpha FG-GAP repeat containing 2	0.838325	CTCF.p2:7:0.838
chr11	120627844	120627953	reg1028792.p2	4.698	+	AB384776 NM_014619 S67803	-96871	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-245433	+	BC063117 NM_001198665 NM_015313	-420281	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	266912	+	NM_005422	345476	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	535507	+	NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.718089	CTCF.p2:-34:0.572
chr15	46087813	46087927	reg1029699.p1	4.698	+	TSC_hg19_v1_chr15_+_45927245 AK222463 AF042284 NM_021199 AF151802 AK313111 BC016836	-160621	+	TSC_hg19_v1_chr15_+_45879759 AK128626	-208097	+	TSC_hg19_v1_chr15_+_45879576 AK057545 BC004819 AK315581 AB527698	-208263	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	1388517	+	TSC_hg19_v1_chr15_+_48009541 AK290032	1921718	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	1922815	+	AK222463|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF042284|SQRDL|58472|sulfide quinone reductase-like (yeast)##NM_021199|SQRDL|58472|sulfide quinone reductase-like (yeast)##AF151802|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK313111|SQRDL|58472|sulfide quinone reductase-like (yeast)##BC016836|SQRDL|58472|sulfide quinone reductase-like (yeast)##AK128626|PLDN|26258|pallidin homolog (mouse)##AK057545|PLDN|26258|pallidin homolog (mouse)##BC004819|PLDN|26258|pallidin homolog (mouse)##AK315581|PLDN|26258|pallidin homolog (mouse)##AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	0.495644	CTCF.p2:-15:0.496
chr20	32103545	32103688	reg1035124.p1	4.698	+	TSC_hg19_v1_chr20_+_32077922 NM_001032999 AF052211	-25645	+	TSC_hg19_v1_chr20_+_32077885 AK294168 AK307887	-25780	+	AB590297 DQ893566 DQ896816 AK301800 TSC_hg19_v1_chr20_-_32031570 U40571 BC026215 S81737 AK291994 NM_003098	-72055	-	BC015066 NM_001039709 NM_005093 AF069747 AF052212	46561	+	DQ080434 NM_080825 BC032818	146499	+	NM_001024675 BC137111 BC137114	150697	+	NM_001032999|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AF052211|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AK294168|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AK307887|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##DQ893566|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##DQ896816|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##AK301800|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##U40571|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##BC026215|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##S81737|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##AK291994|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##NM_003098|SNTA1|6640|syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)##BC015066|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##NM_001039709|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##NM_005093|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AF069747|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##AF052212|CBFA2T2|9139|core-binding factor, runt domain, alpha subunit 2; translocated to, 2##DQ080434|C20orf144|128864|chromosome 20 open reading frame 144##NM_080825|C20orf144|128864|chromosome 20 open reading frame 144##BC032818|C20orf144|128864|chromosome 20 open reading frame 144##NM_001024675|ACTL10|170487|actin-like 10##BC137111|ACTL10|170487|actin-like 10##BC137114|ACTL10|170487|actin-like 10	0.324845	CTCF.p2:-25:0.325
chr4	114557764	114557883	reg1027726.p1	4.698	+	TSC_hg19_v1_chr4_+_114214102 AK294720	-343704	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	-586989	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-818522	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	124458	-	TSC_hg19_v1_chr4_-_114682341 AK294517	124533	-	BC022558 TSC_hg19_v1_chr4_-_114682567	124743	-	AK294720|ANK2|287|ankyrin 2, neuronal##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK294517|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC022558|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.0	
chr7	2738532	2738712	reg1025140.p1	4.698	+	AK289723 AB075830 BC146753 NM_133463	-19464	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-66919	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	-67019	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	145186	-	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	344840	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	602377	+	AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1	0.0	
chr11	10339342	10339427	reg1027555.p1	4.697	+	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	-12755	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	-23618	-	AK098060 TSC_hg19_v1_chr11_+_9779882	-559522	+	AK295046 NM_001172431	132483	+	NM_000480 BC126118 TSC_hg19_v1_chr11_+_10472246 AK311436 M84720 AK289998 AK294444 AK313039 HQ258646	133011	+	NM_001025389 D12775 AK308181 M84721 AK299113 TSC_hg19_v1_chr11_+_10476953	137435	+	AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK098060|LOC283104|283104|uncharacterized LOC283104##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3##NM_000480|AMPD3|272|adenosine monophosphate deaminase 3##BC126118|AMPD3|272|adenosine monophosphate deaminase 3##AK311436|AMPD3|272|adenosine monophosphate deaminase 3##M84720|AMPD3|272|adenosine monophosphate deaminase 3##AK289998|AMPD3|272|adenosine monophosphate deaminase 3##AK294444|AMPD3|272|adenosine monophosphate deaminase 3##AK313039|AMPD3|272|adenosine monophosphate deaminase 3##HQ258646|AMPD3|272|adenosine monophosphate deaminase 3##NM_001025389|AMPD3|272|adenosine monophosphate deaminase 3##D12775|AMPD3|272|adenosine monophosphate deaminase 3##AK308181|AMPD3|272|adenosine monophosphate deaminase 3##M84721|AMPD3|272|adenosine monophosphate deaminase 3##AK299113|AMPD3|272|adenosine monophosphate deaminase 3	0.0	
chr11	119599937	119600082	reg1016370.p1	4.697	+	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	-627	-	BC037832 NM_006288	-305766	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-306100	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	399537	-	AK299472 TSC_hg19_v1_chr11_-_120008323	408263	-	AB464321 CU675956 EU446943 TSC_hg19_v1_chr11_-_120008772	408746	-	X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29##EU446943|TRIM29|23650|tripartite motif containing 29	0.0	
chr13	80623088	80623243	reg1031805.p1	4.697	+	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-567610	+	TSC_hg19_v1_chr13_+_80055411 AK297197 AK001723	-567743	+	TSC_hg19_v1_chr13_+_80055257 NM_001161407 NM_019080 AB097019 AB097028 AB097029	-567894	+	BC004205 TSC_hg19_v1_chr13_-_80913114	289877	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	291899	-	TSC_hg19_v1_chr13_-_84456424 BC051738	3833260	-	AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##AK297197|NDFIP2|54602|Nedd4 family interacting protein 2##AK001723|NDFIP2|54602|Nedd4 family interacting protein 2##NM_001161407|NDFIP2|54602|Nedd4 family interacting protein 2##NM_019080|NDFIP2|54602|Nedd4 family interacting protein 2##AB097019|NDFIP2|54602|Nedd4 family interacting protein 2##AB097028|NDFIP2|54602|Nedd4 family interacting protein 2##AB097029|NDFIP2|54602|Nedd4 family interacting protein 2##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1	0.0	
chr17	25758092	25758191	reg1029002.p2	4.697	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-136860	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-137019	+	NM_001190452	-3735705	+	BC035488 BC042106 NM_014238	40888	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	200027	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	200062	+	AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.219987	
chr4	90479449	90479563	reg1029907.p1	4.697	+	TSC_hg19_v1_chr4_-_90229171 NM_198281	-250349	-	AK124616 TSC_hg19_v1_chr4_-_90228950	-250555	-	AK027653 NM_145715	-445539	+	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	278736	-	NM_001146055	279940	-	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	336556	+	NM_198281|GPRIN3|285513|GPRIN family member 3##AK124616|GPRIN3|285513|GPRIN family member 3##AK027653|TIGD2|166815|tigger transposable element derived 2##NM_145715|TIGD2|166815|tigger transposable element derived 2##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_001146055|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1	0.820502	CTCF.p2:-11:0.821
chr5	60140032	60140134	reg1029172.p2	4.697	+	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	-12	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	-144118	-	TSC_hg19_v1_chr5_-_59995928 AF490257	-144167	-	AB527753 BT020021 CR536563 TSC_hg19_v1_chr5_-_60240898 U28413 AK056931 AK304610 AK314511 BC009793 AK290726 AK294856 NM_000082	100787	-	TSC_hg19_v1_chr5_+_60241003 AK026051 NM_174889 AF087990 AK291296 BC001753 BC070357 BC033965 AB183433	100929	+	BC146876 BC146881 BC014242 BC047489 TSC_hg19_v1_chr5_-_60458209	318095	-	AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AF490257|DEPDC1B|55789|DEP domain containing 1B##BT020021|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##CR536563|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##U28413|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK056931|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK304610|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK314511|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##BC009793|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK290726|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK294856|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##NM_000082|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK026051|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_174889|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AF087990|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AK291296|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC001753|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC070357|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC033965|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AB183433|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC146876|C5orf43|643155|chromosome 5 open reading frame 43##BC146881|C5orf43|643155|chromosome 5 open reading frame 43##BC014242|C5orf43|643155|chromosome 5 open reading frame 43##BC047489|C5orf43|643155|chromosome 5 open reading frame 43	0.276438	CTCF.p2:95:0.276
chr7	130809055	130809235	reg1031963.p2	4.697	+	AK294384 NM_001145354	-14291	+	TSC_hg19_v1_chr7_-_130792857 BC047367	-16286	-	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-390218	-	NM_013255 TSC_hg19_v1_chr7_+_131012611	203461	+	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	203494	+	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	432218	-	AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##BC047367|FLJ43663|378805|uncharacterized LOC378805##AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like	0.0	
chr15	49093383	49093534	reg1029301.p2	4.696	+	TSC_hg19_v1_chr15_-_48937907 BC146854 AK304737 BC094721 NM_000138 X63556	-155529	-	TSC_hg19_v1_chr15_-_48937070 L13923	-156375	-	TSC_hg19_v1_chr15_+_48624363 AK291515 NM_001948 AK312122 U31930 U62891 L11877 AB049113 M89913 DQ891191 DQ894375 CR541720 CR541781	-469057	+	BC117182 TSC_hg19_v1_chr15_-_49103277 AB020719 BC069186 AK303805 BX648822 BC107721 NM_001194998 NM_014985	9804	-	TSC_hg19_v1_chr15_+_49170330 NM_014335 BC114944 BC114946 AK315365 AF092135 AF109873 AF349444 AK098383 AL109701 BC024151 AL357456 BC007944 AB527924 AF274951	76914	+	BC033907 NM_203349	162182	-	BC146854|FBN1|2200|fibrillin 1##AK304737|FBN1|2200|fibrillin 1##BC094721|FBN1|2200|fibrillin 1##NM_000138|FBN1|2200|fibrillin 1##X63556|FBN1|2200|fibrillin 1##L13923|FBN1|2200|fibrillin 1##AK291515|DUT|1854|deoxyuridine triphosphatase##NM_001948|DUT|1854|deoxyuridine triphosphatase##AK312122|DUT|1854|deoxyuridine triphosphatase##U31930|DUT|1854|deoxyuridine triphosphatase##U62891|DUT|1854|deoxyuridine triphosphatase##L11877|DUT|1854|deoxyuridine triphosphatase##AB049113|DUT|1854|deoxyuridine triphosphatase##M89913|DUT|1854|deoxyuridine triphosphatase##DQ891191|DUT|1854|deoxyuridine triphosphatase##DQ894375|DUT|1854|deoxyuridine triphosphatase##CR541720|DUT|1854|deoxyuridine triphosphatase##CR541781|DUT|1854|deoxyuridine triphosphatase##BC117182|CEP152|22995|centrosomal protein 152kDa##AB020719|CEP152|22995|centrosomal protein 152kDa##BC069186|CEP152|22995|centrosomal protein 152kDa##AK303805|CEP152|22995|centrosomal protein 152kDa##BX648822|CEP152|22995|centrosomal protein 152kDa##BC107721|CEP152|22995|centrosomal protein 152kDa##NM_001194998|CEP152|22995|centrosomal protein 152kDa##NM_014985|CEP152|22995|centrosomal protein 152kDa##NM_014335|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114946|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK315365|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF092135|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF109873|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF349444|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK098383|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL109701|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC024151|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL357456|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC007944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4	0.792977	CTCF.p2:-1:0.793
chr17	61787823	61787962	reg1029061.p1	4.696	+	TSC_hg19_v1_chr17_-_61777486 AK092301 AX747464 BC004400 NM_030576 AY037154	-10374	-	BC025738 TSC_hg19_v1_chr17_-_61777476	-10421	-	TSC_hg19_v1_chr17_+_61699786 BC090859 NM_002401 NM_203351 AL834303	-88094	+	BC043641 TSC_hg19_v1_chr17_-_61819160 AL832407 AK301331 AK075005	31249	-	TSC_hg19_v1_chr17_-_61819199 AF308302 AK074771 AK293160 AY290821 NM_001003786 NM_001003787 NM_001003788 NM_001165969 NM_001165970 NM_153335	31355	-	TSC_hg19_v1_chr17_-_61850935 BC008905 AK027844 AK027786 AK075387 AF226054 AK314328	63025	-	AK092301|LIMD2|80774|LIM domain containing 2##BC004400|LIMD2|80774|LIM domain containing 2##NM_030576|LIMD2|80774|LIM domain containing 2##AY037154|LIMD2|80774|LIM domain containing 2##BC025738|LIMD2|80774|LIM domain containing 2##BC090859|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##NM_002401|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##NM_203351|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AL834303|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##BC043641|STRADA|92335|STE20-related kinase adaptor alpha##AL832407|STRADA|92335|STE20-related kinase adaptor alpha##AK301331|STRADA|92335|STE20-related kinase adaptor alpha##AK075005|STRADA|92335|STE20-related kinase adaptor alpha##AF308302|STRADA|92335|STE20-related kinase adaptor alpha##AK074771|STRADA|92335|STE20-related kinase adaptor alpha##AK293160|STRADA|92335|STE20-related kinase adaptor alpha##AY290821|STRADA|92335|STE20-related kinase adaptor alpha##NM_001003786|STRADA|92335|STE20-related kinase adaptor alpha##NM_001003787|STRADA|92335|STE20-related kinase adaptor alpha##NM_001003788|STRADA|92335|STE20-related kinase adaptor alpha##NM_001165969|STRADA|92335|STE20-related kinase adaptor alpha##NM_001165970|STRADA|92335|STE20-related kinase adaptor alpha##NM_153335|STRADA|92335|STE20-related kinase adaptor alpha##BC008905|CCDC47|57003|coiled-coil domain containing 47##AK027844|CCDC47|57003|coiled-coil domain containing 47##AK027786|CCDC47|57003|coiled-coil domain containing 47##AK075387|CCDC47|57003|coiled-coil domain containing 47##AF226054|CCDC47|57003|coiled-coil domain containing 47##AK314328|CCDC47|57003|coiled-coil domain containing 47	0.828338	CTCF.p2:9:0.828
chr2	96729324	96729448	reg1028281.p1	4.696	+	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	-28692	-	TSC_hg19_v1_chr2_+_96676311 BC015216	-53062	+	TSC_hg19_v1_chr2_-_96657677 AK302433	-71764	-	NM_000682 AB527942 BC133021 BC136537	52549	-	BC107126 AJ537600 BC107127 NM_001002036	74787	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	81568	-	BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302433|ANKRD36C|400986|ankyrin repeat domain 36C##NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2	0.943661	CTCF.p2:-18:0.884
chr9	126441853	126442034	reg1030328.p2	4.696	+	NM_173689 AK123000 DQ426866 AY720432	-323450	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-411055	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	-411123	-	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	250368	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	331940	+	TSC_hg19_v1_chr9_+_126774046 BC034458	332128	+	NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC034458|LHX2|9355|LIM homeobox 2	0.0	
chr14	103383890	103384071	reg1003159.p3	4.695	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	-140080	+	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	-140161	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-324819	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	5018	+	TSC_hg19_v1_chr14_-_103430941 BX248752	46978	-	AB384568 TSC_hg19_v1_chr14_-_103523568	139561	-	AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AF155595|RCOR1|23186|REST corepressor 1##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)##BX248752|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)	0.069452	
chr16	11766834	11767015	reg1027361.p2	4.695	+	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	-4626	+	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	-86135	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	-86737	-	TSC_hg19_v1_chr16_-_11836686 AK297094 BX648407 AK027646 NM_015914 BC002856 BC018635	69732	-	BC046363 BC036857 TSC_hg19_v1_chr16_-_11891096 AK091803 AX747194	124127	-	TSC_hg19_v1_chr16_-_11891103 NM_014153	124191	-	NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##AK297094|TXNDC11|51061|thioredoxin domain containing 11##BX648407|TXNDC11|51061|thioredoxin domain containing 11##AK027646|TXNDC11|51061|thioredoxin domain containing 11##NM_015914|TXNDC11|51061|thioredoxin domain containing 11##BC002856|TXNDC11|51061|thioredoxin domain containing 11##BC018635|TXNDC11|51061|thioredoxin domain containing 11##BC046363|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC036857|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK091803|ZC3H7A|29066|zinc finger CCCH-type containing 7A##NM_014153|ZC3H7A|29066|zinc finger CCCH-type containing 7A	0.011112	
chr16	3137299	3137392	reg1027142.p2	4.695	+	BC105602 TSC_hg19_v1_chr16_+_3115641 BC018782 NM_001012632 M59807 NM_001012636 AB590933 EU339107 JN546102	-21619	+	AK296143 AK310053 TSC_hg19_v1_chr16_+_3115639	-21706	+	NM_001012634 TSC_hg19_v1_chr16_+_3115638	-21707	+	BC114452 AK027455 NM_032805	5504	-	TSC_hg19_v1_chr16_-_3149286 AK074736	11937	-	TSC_hg19_v1_chr16_+_3162586 NM_001042428 NM_003456 AK313009 AF060865 BC002810	25250	+	BC105602|IL32|9235|interleukin 32##BC018782|IL32|9235|interleukin 32##NM_001012632|IL32|9235|interleukin 32##M59807|IL32|9235|interleukin 32##NM_001012636|IL32|9235|interleukin 32##EU339107|IL32|9235|interleukin 32##AK296143|IL32|9235|interleukin 32##AK310053|IL32|9235|interleukin 32##NM_001012634|IL32|9235|interleukin 32##BC114452|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AK027455|ZSCAN10|84891|zinc finger and SCAN domain containing 10##NM_032805|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AK074736|ZSCAN10|84891|zinc finger and SCAN domain containing 10##NM_001042428|ZNF205|7755|zinc finger protein 205##NM_003456|ZNF205|7755|zinc finger protein 205##AK313009|ZNF205|7755|zinc finger protein 205##AF060865|ZNF205|7755|zinc finger protein 205##BC002810|ZNF205|7755|zinc finger protein 205	0.123018	
chr17	46918772	46918913	reg1032163.p1	4.695	+	NM_005831 AK293329 TSC_hg19_v1_chr17_+_46908406 AK293137 AK303313 AK304024 AK310648 AK314796 U22897 AK222666 AK223227 AK298177 BC004130	-10452	+	AK097392 AK302952 BC041368 AL834151 NM_001130918	-24418	-	CU689652 BC033563 NM_173623 AK310321	-47197	-	AK095669 TSC_hg19_v1_chr17_+_46970178 NM_001002027 NM_005175 AL080089 AK311848 D13118	51343	+	TSC_hg19_v1_chr17_+_46985768 NM_023079 AK296865	66903	+	AK130303 TSC_hg19_v1_chr17_+_46985840 AK024030 AK122770	66992	+	NM_005831|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293329|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293137|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK303313|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK304024|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK314796|CALCOCO2|10241|calcium binding and coiled-coil domain 2##U22897|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK222666|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK223227|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK298177|CALCOCO2|10241|calcium binding and coiled-coil domain 2##BC004130|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK097392|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK302952|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC041368|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AL834151|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_001130918|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC033563|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_173623|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK310321|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK095669|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_001002027|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_005175|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AL080089|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AK311848|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##D13118|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_023079|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK296865|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK130303|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK024030|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK122770|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z	0.0	
chr2	152548260	152548364	reg1028799.p1	4.695	+	AY727912 NM_001177665 TSC_hg19_v1_chr2_+_152266674	-281674	+	TSC_hg19_v1_chr2_+_152266419 AY727910 AY727913 NM_001177663 NM_018151 AY727911 NM_001177664 AK299572 AK299291 BX648324 AY585745 CR933663	-281882	+	NM_007115 M31165 BC030205 AB590644 AJ419936 AJ421518 CU688838 AF086484	-334133	+	TSC_hg19_v1_chr2_-_152590990 AK096903 AK307607 BC029384 BC012533 BC056251 BC105590 NM_001164507 NM_001164508 NM_004543	42679	-	AB528315 AF493891 BT009829 DQ891193 DQ894376 TSC_hg19_v1_chr2_-_152684707 AF100740	136409	-	TSC_hg19_v1_chr2_-_152684901 AK292714 BC001254	136591	-	AY727912|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177665|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727910|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727913|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_018151|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727911|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177664|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299572|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299291|RIF1|55183|RAP1 interacting factor homolog (yeast)##BX648324|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY585745|RIF1|55183|RAP1 interacting factor homolog (yeast)##CR933663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_007115|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##M31165|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##BC030205|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AJ419936|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AJ421518|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AF086484|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AK096903|NEB|4703|nebulin##AK307607|NEB|4703|nebulin##BC029384|NEB|4703|nebulin##BC012533|NEB|4703|nebulin##BC056251|NEB|4703|nebulin##BC105590|NEB|4703|nebulin##NM_001164507|NEB|4703|nebulin##NM_001164508|NEB|4703|nebulin##NM_004543|NEB|4703|nebulin##AF493891|ARL5A|26225|ADP-ribosylation factor-like 5A##BT009829|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ891193|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ894376|ARL5A|26225|ADP-ribosylation factor-like 5A##AF100740|ARL5A|26225|ADP-ribosylation factor-like 5A##AK292714|ARL5A|26225|ADP-ribosylation factor-like 5A##BC001254|ARL5A|26225|ADP-ribosylation factor-like 5A	0.922461	CTCF.p2:13:0.922
chr3	156059958	156060065	reg1029832.p1	4.695	+	NM_172159 BC043166 AK127240	-51201	+	NM_003471 AK292999 L39833 U16953 U17968	-199149	+	NM_172160 L47665 AK292693 AK303287	-221660	+	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	212870	-	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	212932	-	NM_015508	332193	+	NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_003471|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292999|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L39833|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U16953|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##U17968|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_172160|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##L47665|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK292693|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK303287|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	0.0	
chr9	139962721	139962901	reg1010243.p2	4.695	+	AF144748 EF495152 CU690182 DQ892410 DQ895623 U91510 BC035738 NM_001246 NM_203468	-14336	-	TSC_hg19_v1_chr9_-_139940630 AF327349 AK074793 AF285836 NM_015392	-22172	-	TSC_hg19_v1_chr9_-_139940559 BC004217	-22249	-	TSC_hg19_v1_chr9_-_139965024 BC048267 NM_178448 DQ150361	2222	-	TSC_hg19_v1_chr9_+_139971968 NM_207309	9142	+	AL832421 TSC_hg19_v1_chr9_+_139972236 AK095393 BC106035	9429	+	AF144748|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##EF495152|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##DQ892410|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##DQ895623|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##U91510|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##BC035738|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##NM_001246|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##NM_203468|ENTPD2|954|ectonucleoside triphosphate diphosphohydrolase 2##AF327349|NPDC1|56654|neural proliferation, differentiation and control, 1##AK074793|NPDC1|56654|neural proliferation, differentiation and control, 1##AF285836|NPDC1|56654|neural proliferation, differentiation and control, 1##NM_015392|NPDC1|56654|neural proliferation, differentiation and control, 1##BC004217|NPDC1|56654|neural proliferation, differentiation and control, 1##BC048267|C9orf140|89958|chromosome 9 open reading frame 140##NM_178448|C9orf140|89958|chromosome 9 open reading frame 140##DQ150361|C9orf140|89958|chromosome 9 open reading frame 140##NM_207309|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1##AL832421|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1##AK095393|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1##BC106035|UAP1L1|91373|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	0.756653	CTCF.p2:24:0.757
chr10	126220773	126220893	reg1027523.p2	4.694	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-70412	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-82256	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-113315	-	D50930 TSC_hg19_v1_chr10_-_126432660	211811	-	TSC_hg19_v1_chr10_-_126432823 BC031654	211983	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	212078	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.900385	CTCF.p2:-10:0.900
chr14	71088756	71088927	reg1000299.p1	4.694	+	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	-21464	-	AB463868 BT006831 CR541697 TSC_hg19_v1_chr14_-_71067367	-21481	-	BC025378 NM_003814	-87110	-	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	19768	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	186968	-	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	285292	+	AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##BT006831|MED6|10001|mediator complex subunit 6##CR541697|MED6|10001|mediator complex subunit 6##BC025378|ADAM20|8748|ADAM metallopeptidase domain 20##NM_003814|ADAM20|8748|ADAM metallopeptidase domain 20##D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)	0.0	
chr14	71107879	71108059	reg1027948.p2	4.694	+	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	-40592	-	AB463868 BT006831 CR541697 TSC_hg19_v1_chr14_-_71067367	-40609	-	BC025378 NM_003814	-106238	-	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	640	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	167840	-	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	266164	+	AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##BT006831|MED6|10001|mediator complex subunit 6##CR541697|MED6|10001|mediator complex subunit 6##BC025378|ADAM20|8748|ADAM metallopeptidase domain 20##NM_003814|ADAM20|8748|ADAM metallopeptidase domain 20##D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)	0.0	
chr17	33498760	33498941	reg1008940.p2	4.694	+	AK095929 BX647642 NM_001033576 NM_173167 AL832355 AL833281	-24003	+	AB209111 BC002884 TSC_hg19_v1_chr17_-_33469323 BC012075 AK303253 AK001320 AK304508 NM_001014445 NM_018096	-29530	-	AK313775 NM_017559 BC024002 AK225743 AL133054 EU831600 EU831687	-50196	+	AK097473 BC136422 BC140700 NM_152462	22543	-	TSC_hg19_v1_chr17_+_33570090 NM_144975 AK303632 BX647942 AK054668 AK303299 BC021238	71243	+	AL831964 BC052586 AK092241 AX747425 TSC_hg19_v1_chr17_-_33700641 NM_001104587 NM_001104588 NM_001104589 NM_001104590 NM_152270	201819	-	AK095929|UNC45B|146862|unc-45 homolog B (C. elegans)##BX647642|UNC45B|146862|unc-45 homolog B (C. elegans)##NM_001033576|UNC45B|146862|unc-45 homolog B (C. elegans)##NM_173167|UNC45B|146862|unc-45 homolog B (C. elegans)##AL832355|UNC45B|146862|unc-45 homolog B (C. elegans)##AL833281|UNC45B|146862|unc-45 homolog B (C. elegans)##AB209111|NLE1|54475|notchless homolog 1 (Drosophila)##BC002884|NLE1|54475|notchless homolog 1 (Drosophila)##BC012075|NLE1|54475|notchless homolog 1 (Drosophila)##AK303253|NLE1|54475|notchless homolog 1 (Drosophila)##AK001320|NLE1|54475|notchless homolog 1 (Drosophila)##AK304508|NLE1|54475|notchless homolog 1 (Drosophila)##NM_001014445|NLE1|54475|notchless homolog 1 (Drosophila)##NM_018096|NLE1|54475|notchless homolog 1 (Drosophila)##AK313775|FNDC8|54752|fibronectin type III domain containing 8##NM_017559|FNDC8|54752|fibronectin type III domain containing 8##BC024002|FNDC8|54752|fibronectin type III domain containing 8##AK225743|FNDC8|54752|fibronectin type III domain containing 8##AL133054|FNDC8|54752|fibronectin type III domain containing 8##EU831600|FNDC8|54752|fibronectin type III domain containing 8##EU831687|FNDC8|54752|fibronectin type III domain containing 8##AK097473|SLC35G3|146861|solute carrier family 35, member G3##BC136422|SLC35G3|146861|solute carrier family 35, member G3##BC140700|SLC35G3|146861|solute carrier family 35, member G3##NM_152462|SLC35G3|146861|solute carrier family 35, member G3##NM_144975|SLFN5|162394|schlafen family member 5##AK303632|SLFN5|162394|schlafen family member 5##BX647942|SLFN5|162394|schlafen family member 5##AK054668|SLFN5|162394|schlafen family member 5##AK303299|SLFN5|162394|schlafen family member 5##BC021238|SLFN5|162394|schlafen family member 5##AL831964|SLFN11|91607|schlafen family member 11##BC052586|SLFN11|91607|schlafen family member 11##AK092241|SLFN11|91607|schlafen family member 11##NM_001104587|SLFN11|91607|schlafen family member 11##NM_001104588|SLFN11|91607|schlafen family member 11##NM_001104589|SLFN11|91607|schlafen family member 11##NM_001104590|SLFN11|91607|schlafen family member 11##NM_152270|SLFN11|91607|schlafen family member 11	0.0	
chr19	6532658	6532762	reg1029191.p1	4.694	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	-1684	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-30393	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-50927	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	58322	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	58396	-	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	58448	-	NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule	0.0	
chr2	147280860	147281028	reg1028594.p1	4.694	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-2003023	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-2003313	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-2005741	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	1321173	+	TSC_hg19_v1_chr2_+_148602300 AK314124	1321391	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	1321701	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.637733	CTCF.p2:43:0.638
chr6	167516826	167516996	reg1030757.p2	4.694	+	TSC_hg19_v1_chr6_+_167412884 NM_007045 NM_194429 Y18046 AK294950 AK289846 BX647686 AK312791 BC011902 AB590215 CU680104 DQ893037 DQ896278 AJ420472	-104058	+	AK315467 TSC_hg19_v1_chr6_-_167370038 BC036282 NM_003730	-146854	-	TSC_hg19_v1_chr6_-_167370030 BC001660 BC001819 BC039713 BC051912 AJ419865 AJ419866 AJ419867 U85625	-146901	-	NM_004367	8383	+	NM_031409 U68031 U68030	19338	+	BC095537 NM_005299	54405	-	NM_007045|FGFR1OP|11116|FGFR1 oncogene partner##NM_194429|FGFR1OP|11116|FGFR1 oncogene partner##Y18046|FGFR1OP|11116|FGFR1 oncogene partner##AK294950|FGFR1OP|11116|FGFR1 oncogene partner##AK289846|FGFR1OP|11116|FGFR1 oncogene partner##AK312791|FGFR1OP|11116|FGFR1 oncogene partner##BC011902|FGFR1OP|11116|FGFR1 oncogene partner##DQ893037|FGFR1OP|11116|FGFR1 oncogene partner##DQ896278|FGFR1OP|11116|FGFR1 oncogene partner##AJ420472|FGFR1OP|11116|FGFR1 oncogene partner##AK315467|RNASET2|8635|ribonuclease T2##BC036282|RNASET2|8635|ribonuclease T2##NM_003730|RNASET2|8635|ribonuclease T2##BC001660|RNASET2|8635|ribonuclease T2##BC001819|RNASET2|8635|ribonuclease T2##BC039713|RNASET2|8635|ribonuclease T2##BC051912|RNASET2|8635|ribonuclease T2##AJ419865|RNASET2|8635|ribonuclease T2##AJ419866|RNASET2|8635|ribonuclease T2##AJ419867|RNASET2|8635|ribonuclease T2##U85625|RNASET2|8635|ribonuclease T2##NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31	0.0	
chr9	127016742	127016922	reg1024352.p2	4.694	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-242761	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-242949	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-324521	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	3178	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	3413	+	TSC_hg19_v1_chr9_+_127020255 AB026289	3432	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chrX	1573330	1573510	reg1006121.p2	4.694	+	AK301844 NM_001173473	-769	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-1619	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-62451	-	BC043610 GQ280263 NM_178129 AK126147	82618	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	137109	+	NM_004043 U11090	140927	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr10	92851050	92851180	reg1029227.p2	4.693	+	X83703 NM_014391	-170087	-	AB528537 DQ892852 DQ896099 AY903446 BC005191 AK290960 BC018667 TSC_hg19_v1_chr10_-_92680845	-170299	-	TSC_hg19_v1_chr10_+_92631730 NM_001104546 NM_006413 AL833628 AK296196 U77665 AK312900 AK225532 DQ893181 DQ896488	-219393	+	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	71647	+	TSC_hg19_v1_chr10_+_92980445 NM_032373	129293	+	TSC_hg19_v1_chr10_+_92980539 AL832496	129419	+	X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##NM_001104546|RPP30|10556|ribonuclease P/MRP 30kDa subunit##NM_006413|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AL833628|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK296196|RPP30|10556|ribonuclease P/MRP 30kDa subunit##U77665|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK312900|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK225532|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ893181|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ896488|RPP30|10556|ribonuclease P/MRP 30kDa subunit##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5##NM_032373|PCGF5|84333|polycomb group ring finger 5##AL832496|PCGF5|84333|polycomb group ring finger 5	0.126947	
chr3	49937371	49937459	reg1027120.p1	4.693	+	TSC_hg19_v1_chr3_-_49907340 BC019256 BC000497 BC001921 BC005828 BC017363 AK297437 BX647074 AK299953 AL136697 AK074899 AK297258 AK295588 AK075294 AK074856 NM_024046 AK315525	-30070	-	AB451320 AB451449 AB590668 CU674148 EF036504 TSC_hg19_v1_chr3_-_49894001 AK225873 BC000310 BC019283 AK292172 NM_005879 U77845 AK295780	-43470	-	TSC_hg19_v1_chr3_-_49851387 NM_003335 L13852	-86026	-	TSC_hg19_v1_chr3_-_49941304 NM_001244937 NM_002447	3887	-	BC047022 BC009459 AK092018 AK307140 AX747314 AK074404 TSC_hg19_v1_chr3_-_49967263 BC006299 AK315630 NM_001142501 NM_032355	29904	-	AK291719 NM_001167582 NM_005777 AK298108 AF069517 AL832236 TSC_hg19_v1_chr3_+_49977575 BX648535	40111	+	BC019256|CAMKV|79012|CaM kinase-like vesicle-associated##BC000497|CAMKV|79012|CaM kinase-like vesicle-associated##BC001921|CAMKV|79012|CaM kinase-like vesicle-associated##BC005828|CAMKV|79012|CaM kinase-like vesicle-associated##BC017363|CAMKV|79012|CaM kinase-like vesicle-associated##AK297437|CAMKV|79012|CaM kinase-like vesicle-associated##BX647074|CAMKV|79012|CaM kinase-like vesicle-associated##AK299953|CAMKV|79012|CaM kinase-like vesicle-associated##AL136697|CAMKV|79012|CaM kinase-like vesicle-associated##AK074899|CAMKV|79012|CaM kinase-like vesicle-associated##AK297258|CAMKV|79012|CaM kinase-like vesicle-associated##AK295588|CAMKV|79012|CaM kinase-like vesicle-associated##AK075294|CAMKV|79012|CaM kinase-like vesicle-associated##AK074856|CAMKV|79012|CaM kinase-like vesicle-associated##NM_024046|CAMKV|79012|CaM kinase-like vesicle-associated##AK315525|CAMKV|79012|CaM kinase-like vesicle-associated##AB451320|TRAIP|10293|TRAF interacting protein##AB451449|TRAIP|10293|TRAF interacting protein##EF036504|TRAIP|10293|TRAF interacting protein##AK225873|TRAIP|10293|TRAF interacting protein##BC000310|TRAIP|10293|TRAF interacting protein##BC019283|TRAIP|10293|TRAF interacting protein##AK292172|TRAIP|10293|TRAF interacting protein##NM_005879|TRAIP|10293|TRAF interacting protein##U77845|TRAIP|10293|TRAF interacting protein##AK295780|TRAIP|10293|TRAF interacting protein##NM_003335|UBA7|7318|ubiquitin-like modifier activating enzyme 7##L13852|UBA7|7318|ubiquitin-like modifier activating enzyme 7##NM_001244937|MST1R|4486|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)##NM_002447|MST1R|4486|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)##BC047022|MON1A|84315|MON1 homolog A (yeast)##BC009459|MON1A|84315|MON1 homolog A (yeast)##AK092018|MON1A|84315|MON1 homolog A (yeast)##AK307140|MON1A|84315|MON1 homolog A (yeast)##AK074404|MON1A|84315|MON1 homolog A (yeast)##BC006299|MON1A|84315|MON1 homolog A (yeast)##AK315630|MON1A|84315|MON1 homolog A (yeast)##NM_001142501|MON1A|84315|MON1 homolog A (yeast)##NM_032355|MON1A|84315|MON1 homolog A (yeast)##AK291719|RBM6|10180|RNA binding motif protein 6##NM_001167582|RBM6|10180|RNA binding motif protein 6##NM_005777|RBM6|10180|RNA binding motif protein 6##AK298108|RBM6|10180|RNA binding motif protein 6##AF069517|RBM6|10180|RNA binding motif protein 6##AL832236|RBM6|10180|RNA binding motif protein 6##BX648535|RBM6|10180|RNA binding motif protein 6	0.99642	CTCF.p2:17:0.996
chr5	158367978	158368060	reg1024232.p1	4.693	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1081929	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-1183639	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-1197279	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	158438	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	158723	-	AK304228 NM_001199382	266629	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.0	
chr7	2387505	2387686	reg1001077.p1	4.693	+	TSC_hg19_v1_chr7_-_2354077 CU692368 DQ892508 DQ895722 AK074544 AF121858 AK315670 BC021565 NM_013321	-33521	-	TSC_hg19_v1_chr7_-_2354018 BC007785	-33571	-	BC065367 AB025238 AB025239 AB025242 NM_198953 NM_198954 BC022818 BC040144 CU677071	-105062	+	TSC_hg19_v1_chr7_+_2394488 NM_001037283 NM_003751 AK302058	6867	+	TSC_hg19_v1_chr7_+_2394500 BC096753 U78525 AK300967	6907	+	TSC_hg19_v1_chr7_+_2394509 U62583	6921	+	DQ892508|SNX8|29886|sorting nexin 8##DQ895722|SNX8|29886|sorting nexin 8##AK074544|SNX8|29886|sorting nexin 8##AF121858|SNX8|29886|sorting nexin 8##AK315670|SNX8|29886|sorting nexin 8##BC021565|SNX8|29886|sorting nexin 8##NM_013321|SNX8|29886|sorting nexin 8##BC007785|SNX8|29886|sorting nexin 8##BC065367|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025238|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025239|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025242|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198953|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198954|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC022818|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC040144|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_001037283|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##NM_003751|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##AK302058|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##U78525|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##AK300967|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##U62583|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B	0.0	
chr9	75486652	75486808	reg1030221.p2	4.693	+	AF417578 NM_138691	-350014	+	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	-506630	-	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	-507005	-	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	81215	-	NM_000689	81502	-	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	280048	+	AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1	0.886493	CTCF.p2:-31:0.886
chr22	29186271	29186392	reg1030904.p1	4.692	+	TSC_hg19_v1_chr22_+_29168732 AK091133 AX746797 AK295140 CR456461 AB528096 CU013012 CU013300 CU691050	-17552	+	TSC_hg19_v1_chr22_+_29168718 BC065549 BC053874 BC040488 AK302925	-17632	+	TSC_hg19_v1_chr22_+_29168630 AK289516 NM_173510	-17687	+	BC015709 TSC_hg19_v1_chr22_-_29196526 AB463352 AM393640 CU013207 CU013495 DQ890989 DQ894165 CU674466 CR456611 AB076383 AB076384 BC000938 M31627	10160	-	TSC_hg19_v1_chr22_-_29196555 BC012841 AK292188 AK313761 NM_001079539 NM_005080	10236	-	TSC_hg19_v1_chr22_+_29196668 AF086143	10352	+	AK091133|CCDC117|150275|coiled-coil domain containing 117##AK295140|CCDC117|150275|coiled-coil domain containing 117##CR456461|CCDC117|150275|coiled-coil domain containing 117##BC065549|CCDC117|150275|coiled-coil domain containing 117##BC053874|CCDC117|150275|coiled-coil domain containing 117##BC040488|CCDC117|150275|coiled-coil domain containing 117##AK302925|CCDC117|150275|coiled-coil domain containing 117##AK289516|CCDC117|150275|coiled-coil domain containing 117##NM_173510|CCDC117|150275|coiled-coil domain containing 117##BC015709|XBP1|7494|X-box binding protein 1##AM393640|XBP1|7494|X-box binding protein 1##CU013207|XBP1|7494|X-box binding protein 1##CU013495|XBP1|7494|X-box binding protein 1##DQ890989|XBP1|7494|X-box binding protein 1##DQ894165|XBP1|7494|X-box binding protein 1##CR456611|XBP1|7494|X-box binding protein 1##AB076383|XBP1|7494|X-box binding protein 1##AB076384|XBP1|7494|X-box binding protein 1##BC000938|XBP1|7494|X-box binding protein 1##M31627|XBP1|7494|X-box binding protein 1##BC012841|XBP1|7494|X-box binding protein 1##AK292188|XBP1|7494|X-box binding protein 1##AK313761|XBP1|7494|X-box binding protein 1##NM_001079539|XBP1|7494|X-box binding protein 1##NM_005080|XBP1|7494|X-box binding protein 1	0.56239	CTCF.p2:1:0.562
chr2	79088833	79088947	reg1025855.p1	4.692	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	-1339472	-	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-3150839	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-3151171	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	163948	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	226243	-	AK307292 NM_002909 TSC_hg19_v1_chr2_+_79347583	258646	+	BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta##AK307292|REG1A|5967|regenerating islet-derived 1 alpha##NM_002909|REG1A|5967|regenerating islet-derived 1 alpha	0.544634	CTCF.p2:-13:0.545
chr7	5638614	5638697	reg1032312.p1	4.692	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	-6145	+	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	-6217	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-68446	-	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	182567	-	BC004947 TSC_hg19_v1_chr7_-_5821284 AK297231 BC063825 AK092767 AX747717 AK297416 BX537406 NM_207111 NM_207116 AK292396	182654	-	TSC_hg19_v1_chr7_+_5862791 AK291169 AK096288	224130	+	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216##BC004947|RNF216|54476|ring finger protein 216##AK297231|RNF216|54476|ring finger protein 216##BC063825|RNF216|54476|ring finger protein 216##AK092767|RNF216|54476|ring finger protein 216##AK297416|RNF216|54476|ring finger protein 216##BX537406|RNF216|54476|ring finger protein 216##NM_207111|RNF216|54476|ring finger protein 216##NM_207116|RNF216|54476|ring finger protein 216##AK292396|RNF216|54476|ring finger protein 216##AK291169|ZNF815|401303|zinc finger protein 815##AK096288|ZNF815|401303|zinc finger protein 815	0.0	
chr9	108210154	108210266	reg1030844.p2	4.692	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	-203143	+	TSC_hg19_v1_chr9_+_108006937 AJ272365	-203259	+	TSC_hg19_v1_chr9_+_108006931 NM_080546	-203297	+	AK309817 TSC_hg19_v1_chr9_+_108210342 NM_001145313 NM_031919 NM_207647 AF088031 AK299350 AK296433 AK299491 AF316830	53	+	TSC_hg19_v1_chr9_+_108320420 NM_001079802 NM_001198963 NM_006731 AK300840 AK304460 BC058842 AB008226 AB609007	110213	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	214547	+	AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1##AJ272365|SLC44A1|23446|solute carrier family 44, member 1##NM_080546|SLC44A1|23446|solute carrier family 44, member 1##AK309817|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001145313|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_031919|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_207647|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF088031|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299350|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK296433|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299491|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF316830|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001079802|FKTN|2218|fukutin##NM_001198963|FKTN|2218|fukutin##NM_006731|FKTN|2218|fukutin##AK300840|FKTN|2218|fukutin##AK304460|FKTN|2218|fukutin##BC058842|FKTN|2218|fukutin##AB008226|FKTN|2218|fukutin##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2	0.0	
chr9	76896776	76896850	reg1023410.p1	4.692	+	TSC_hg19_v1_chr9_+_75766797 BC001275	-1130010	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	-1130035	+	NM_000689	-1328581	-	NM_006914 BC051830 Y08639	215461	+	AY333284 NM_001177311	605449	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	605921	-	BC001275|ANXA1|301|annexin A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B##AY333284|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177311|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6	0.054846	
chr14	82456874	82457011	reg1003213.p2	4.691	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-456715	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-456794	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-592116	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	3539531	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	3539599	+	TSC_hg19_v1_chr14_+_85999692 AK297248	3542643	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.0	
chr18	31805059	31805184	reg1029093.p2	4.691	+	AB017800 NM_001198546 NM_001198548 NM_003787	-1607	-	AK297185 BC000313 TSC_hg19_v1_chr18_-_31803319	-1878	-	NM_001198547	-2688	-	TSC_hg19_v1_chr18_+_32073264 NM_001198945 NM_001392 NM_032975 NM_032979 AK294746 U26742	268143	+	AJ009668 TSC_hg19_v1_chr18_+_32073374	268242	+	NM_001128175 NM_001198938 NM_001198939 NM_001198940 AK308410 AL833285 BC005300 AB209102	368183	+	AB017800|NOL4|8715|nucleolar protein 4##NM_001198546|NOL4|8715|nucleolar protein 4##NM_001198548|NOL4|8715|nucleolar protein 4##NM_003787|NOL4|8715|nucleolar protein 4##AK297185|NOL4|8715|nucleolar protein 4##BC000313|NOL4|8715|nucleolar protein 4##NM_001198547|NOL4|8715|nucleolar protein 4##NM_001198945|DTNA|1837|dystrobrevin, alpha##NM_001392|DTNA|1837|dystrobrevin, alpha##NM_032975|DTNA|1837|dystrobrevin, alpha##NM_032979|DTNA|1837|dystrobrevin, alpha##AK294746|DTNA|1837|dystrobrevin, alpha##U26742|DTNA|1837|dystrobrevin, alpha##AJ009668|DTNA|1837|dystrobrevin, alpha##NM_001128175|DTNA|1837|dystrobrevin, alpha##NM_001198938|DTNA|1837|dystrobrevin, alpha##NM_001198939|DTNA|1837|dystrobrevin, alpha##NM_001198940|DTNA|1837|dystrobrevin, alpha##AK308410|DTNA|1837|dystrobrevin, alpha##AL833285|DTNA|1837|dystrobrevin, alpha##BC005300|DTNA|1837|dystrobrevin, alpha##AB209102|DTNA|1837|dystrobrevin, alpha	0.240909	CTCF.p2:-8:0.241
chr21	44800843	44801024	reg1031306.p2	4.691	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-211759	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-273249	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-273308	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	45056	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	46062	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	278429	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr6	34393884	34394045	reg1028752.p2	4.691	+	TSC_hg19_v1_chr6_-_34393847 NM_001203245 U14972 BC070235 BC001032 BC071946 AK311797 NM_001014 NM_001202470 NM_001204091	-115	-	TSC_hg19_v1_chr6_-_34360442 NM_006703	-33513	-	TSC_hg19_v1_chr6_-_34360425 BC007727	-33544	-	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	39940	+	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	88690	+	AB031549 BC021299 AF071538 AK301543 NM_001252294 NM_012391	130132	-	NM_001203245|RPS10|6204|ribosomal protein S10##U14972|RPS10|6204|ribosomal protein S10##BC070235|RPS10|6204|ribosomal protein S10##BC001032|RPS10|6204|ribosomal protein S10##BC071946|RPS10|6204|ribosomal protein S10##AK311797|RPS10|6204|ribosomal protein S10##NM_001014|RPS10|6204|ribosomal protein S10##NM_001202470|RPS10-NUDT3|100529239|RPS10-NUDT3 readthrough##NM_001204091|RPS10|6204|ribosomal protein S10##NM_006703|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##BC007727|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB031549|SPDEF|25803|SAM pointed domain containing ets transcription factor##BC021299|SPDEF|25803|SAM pointed domain containing ets transcription factor##AF071538|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK301543|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_001252294|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_012391|SPDEF|25803|SAM pointed domain containing ets transcription factor	0.0	
chr9	37120520	37120664	reg1030738.p2	4.691	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-9	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-84	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-106	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	302114	+	BC010007 TSC_hg19_v1_chr9_-_37465267	344668	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	344803	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.0	
chr11	43187059	43187214	reg1033635.p2	4.690	+	AB046800 NM_020929	-2871473	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-2872542	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-6567334	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	146382	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	146428	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	146504	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.043386	
chr12	55385815	55385996	reg1030634.p2	4.690	+	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	-7403	-	BC132732 BC132734 NM_001098815	-10284	-	NM_058173 AF414087 AY359062 BC111421 AY651259	-137573	+	NM_021191 AK314136	27865	+	BC136988 NM_001005243	137603	+	AB529271 NM_001005280	228903	+	AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1##NM_021191|NEUROD4|58158|neurogenic differentiation 4##AK314136|NEUROD4|58158|neurogenic differentiation 4##BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7	0.0	
chr14	77525800	77525980	reg1031040.p1	4.690	+	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-30830	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	-31206	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-233095	+	AK124327 TSC_hg19_v1_chr14_-_77542533	16643	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	38755	+	BC117676 TSC_hg19_v1_chr14_-_77608072	82125	-	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22	0.0	
chr16	80958554	80958654	reg1028985.p2	4.690	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	-120557	-	AF125108 NM_130897 BC054892 BC035232	-383716	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-1323989	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	81480	+	TSC_hg19_v1_chr16_+_81040132 BC007334	81539	+	TSC_hg19_v1_chr16_-_81040491 AF201935 BC032631 NM_020188	81866	-	AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N##BC007334|CENPN|55839|centromere protein N##AF201935|C16orf61|56942|chromosome 16 open reading frame 61##BC032631|C16orf61|56942|chromosome 16 open reading frame 61##NM_020188|C16orf61|56942|chromosome 16 open reading frame 61	0.400786	CTCF.p2:-1:0.401
chr17	56693190	56693344	reg1029371.p1	4.690	+	AK097440 BC022189 NM_001038704	-71560	-	AK301914 AK302146 NM_001198713	-75089	-	BC018056 U88870 AK295527 AK315396 TSC_hg19_v1_chr17_-_56609427 AF176379 AK308957 NM_080415 NM_080416	-83849	-	AK308299 BC040526 AK125896 BC045647 AL834143 NM_001201457 NM_031272 NM_198393	76128	-	TSC_hg19_v1_chr17_+_56769933 BC107753	76668	+	TSC_hg19_v1_chr17_+_56769962 AF029669 AK290487 BC073161 NM_002876 NM_058216 BC064578 BC093930 BC101485 BC143259 BC000667 AF029670 AB528656 BT007339 AK129738 AK303363	76734	+	AK097440|C17orf47|284083|chromosome 17 open reading frame 47##BC022189|C17orf47|284083|chromosome 17 open reading frame 47##NM_001038704|C17orf47|284083|chromosome 17 open reading frame 47##AK301914|SEPT4|5414|septin 4##AK302146|SEPT4|5414|septin 4##NM_001198713|SEPT4|5414|septin 4##BC018056|SEPT4|5414|septin 4##U88870|SEPT4|5414|septin 4##AK295527|SEPT4|5414|septin 4##AK315396|SEPT4|5414|septin 4##AF176379|SEPT4|5414|septin 4##AK308957|SEPT4|5414|septin 4##NM_080415|SEPT4|5414|septin 4##NM_080416|SEPT4|5414|septin 4##AK308299|TEX14|56155|testis expressed 14##BC040526|TEX14|56155|testis expressed 14##AK125896|TEX14|56155|testis expressed 14##BC045647|TEX14|56155|testis expressed 14##AL834143|TEX14|56155|testis expressed 14##NM_001201457|TEX14|56155|testis expressed 14##NM_031272|TEX14|56155|testis expressed 14##NM_198393|TEX14|56155|testis expressed 14##BC107753|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	0.0	
chr1	104331128	104331243	reg1027019.p1	4.689	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-38683	+	NM_001008221 AK292341	-38907	+	AK292341 NM_001008221	-92114	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	3268180	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	3351557	+	AB023193 TSC_hg19_v1_chr1_+_107683657	3352419	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.988005	CTCF.p2:-3:0.988
chr12	92757712	92757893	reg1027425.p3	4.689	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-218159	-	NM_001920	-1180997	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-1181222	-	AJ845165 AJ845166 NM_001025233	59932	+	AJ845168 NM_001025232	64121	-	NM_001037671 NM_001178097	338816	+	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74	0.0	
chr13	52510032	52510147	reg1031643.p1	4.689	+	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	-73895	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	-131814	-	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-351354	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	75461	-	TSC_hg19_v1_chr13_+_52586546 NM_001004127 BC142998 AK296747 AK092428 AX747540 BC108677 BC111022 AK025456 BC143059 BC150316	76446	+	BC073862 D87455 NM_021645	88663	+	AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)##NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)	0.0	
chr14	76443377	76443502	reg1024801.p1	4.689	+	TSC_hg19_v1_chr14_+_76127671 BC136472 BC136473	-315776	+	TSC_hg19_v1_chr14_+_76127610 AK309748 AY237126 BC002766	-315822	+	NM_015072 TSC_hg19_v1_chr14_+_76127588 BC110652	-315870	+	BT007287 AB590825 TSC_hg19_v1_chr14_-_76447259	3808	-	TSC_hg19_v1_chr14_-_76447323 BC018503 EF560714	3891	-	AK313564 TSC_hg19_v1_chr14_-_76447479 X14149 J03241	4032	-	BC136472|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BC136473|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##AK309748|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##AY237126|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##NM_015072|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BC110652|TTLL5|23093|tubulin tyrosine ligase-like family, member 5##BT007287|TGFB3|7043|transforming growth factor, beta 3##BC018503|TGFB3|7043|transforming growth factor, beta 3##EF560714|TGFB3|7043|transforming growth factor, beta 3##AK313564|TGFB3|7043|transforming growth factor, beta 3##X14149|TGFB3|7043|transforming growth factor, beta 3##J03241|TGFB3|7043|transforming growth factor, beta 3	0.507637	CTCF.p2:-41:0.508
chr16	57509712	57509802	reg1019956.p1	4.689	+	TSC_hg19_v1_chr16_+_57496590 BC003159 AK300124 AK293112 BC028157 AJ224143 AJ224144 J05448 BC000409 AB464040 AF008443 CR542041 DQ891411 DQ894586 EU176305	-13152	+	TSC_hg19_v1_chr16_+_57496570 AK295582	-13186	+	TSC_hg19_v1_chr16_+_57496563 NM_032940	-13199	+	BC003541 TSC_hg19_v1_chr16_-_57520403 NM_018110 AK001350	10628	-	BC008285 BC009941 NM_033212	60708	-	TSC_hg19_v1_chr16_+_57576554 AK303661 AK292783 AK160368 AY358447 AK301357	66797	+	BC003159|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AK300124|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AK293112|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##BC028157|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AJ224143|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AJ224144|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##J05448|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##BC000409|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##AF008443|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##CR542041|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##DQ891411|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##DQ894586|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##EU176305|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa##BC003541|DOK4|55715|docking protein 4##NM_018110|DOK4|55715|docking protein 4##AK001350|DOK4|55715|docking protein 4##BC008285|CCDC102A|92922|coiled-coil domain containing 102A##BC009941|CCDC102A|92922|coiled-coil domain containing 102A##NM_033212|CCDC102A|92922|coiled-coil domain containing 102A##AK303661|GPR114|221188|G protein-coupled receptor 114##AK292783|GPR114|221188|G protein-coupled receptor 114##AK160368|GPR114|221188|G protein-coupled receptor 114##AY358447|GPR114|221188|G protein-coupled receptor 114##AK301357|GPR114|221188|G protein-coupled receptor 114	0.809003	CTCF.p2:-22:0.798
chr3	127092982	127093080	reg1029595.p1	4.689	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	-181037	+	AB385178 NM_032242 X87832	-385591	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-669954	+	AB037108 NM_016372	206248	-	TSC_hg19_v1_chr3_-_127309338 BC017058	216313	-	BC050711 NM_001136053 AF289568 TSC_hg19_v1_chr3_-_127309565 NM_001142646	216502	-	AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC017058|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC050711|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001136053|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##AF289568|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001142646|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	0.69285	CTCF.p2:-3:0.693
chr6_qbl_hap6	4214872	4214984	reg1013182.p2	4.689	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.982461	
chr11	60681329	60681509	reg1028362.p1	4.688	+	TSC_hg19_v1_chr11_-_60674060 AJ131186 BC008719 BC018665 BC018698 NM_014502	-7368	-	CU679057 DQ893003 DQ896249 AB527521 TSC_hg19_v1_chr11_-_60674025 AF086469	-7476	-	NM_207341	-46405	+	NM_024092 AK303961 TSC_hg19_v1_chr11_+_60681578 AK313913	60	+	TSC_hg19_v1_chr11_+_60681647 AX775851 BC001309 AX775849	249	+	TSC_hg19_v1_chr11_+_60691945 NM_017870 NM_178031 AK000546 BC114569 BC032059	10516	+	AJ131186|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC008719|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC018665|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC018698|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##NM_014502|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##DQ893003|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##DQ896249|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##AF086469|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##NM_207341|ZP1|22917|zona pellucida glycoprotein 1 (sperm receptor)##NM_024092|TMEM109|79073|transmembrane protein 109##AK303961|TMEM109|79073|transmembrane protein 109##AK313913|TMEM109|79073|transmembrane protein 109##AX775851|TMEM109|79073|transmembrane protein 109##BC001309|TMEM109|79073|transmembrane protein 109##AX775849|TMEM109|79073|transmembrane protein 109##NM_017870|TMEM132A|54972|transmembrane protein 132A##NM_178031|TMEM132A|54972|transmembrane protein 132A##AK000546|TMEM132A|54972|transmembrane protein 132A##BC114569|TMEM132A|54972|transmembrane protein 132A##BC032059|TMEM132A|54972|transmembrane protein 132A	0.0	
chr11	86808656	86808795	reg1028705.p1	4.688	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	-59747	+	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	-142337	-	TSC_hg19_v1_chr11_-_86666094 AY462097	-142618	-	AK024853 TSC_hg19_v1_chr11_+_87032449	223717	+	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	1099867	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	1262142	-	NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##AY462097|FZD4|8322|frizzled family receptor 4##AK024853|TMEM135|65084|transmembrane protein 135##BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C	0.0	
chr12	57151531	57151711	reg1007431.p2	4.688	+	AB528338 CU675073 EU176421 EU176762 TSC_hg19_v1_chr12_-_57146108 AK223391 AK314866 X74330 BC005266 NM_000946	-5495	-	TSC_hg19_v1_chr12_-_57119316 NM_001113202 NM_001113203	-32303	-	BC105120 BC105122 TSC_hg19_v1_chr12_-_57119084 BC106041 AF054187 AY605660 AY911673 X80909 AK311904 AK096699 AK223085 AK293209	-32579	-	AK313423 BC020710 NM_003725 TSC_hg19_v1_chr12_+_57157107 U89281 AF223225	5490	+	AY044434 BC101551 BC101553 AK122782 NM_148897	176495	-	AF057034 NM_003708	199778	-	EU176421|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##EU176762|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##AK223391|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##AK314866|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##X74330|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##BC005266|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##NM_000946|PRIM1|5557|primase, DNA, polypeptide 1 (49kDa)##NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit##NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC105120|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC105122|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC106041|NACA|4666|nascent polypeptide-associated complex alpha subunit##AF054187|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY605660|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY911673|NACA|4666|nascent polypeptide-associated complex alpha subunit##X80909|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK311904|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK096699|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK223085|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK293209|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK313423|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##BC020710|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##NM_003725|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##U89281|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##AF223225|HSD17B6|8630|hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)##AY044434|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC101551|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##BC101553|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##AK122782|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##NM_148897|SDR9C7|121214|short chain dehydrogenase/reductase family 9C, member 7##AF057034|RDH16|8608|retinol dehydrogenase 16 (all-trans)##NM_003708|RDH16|8608|retinol dehydrogenase 16 (all-trans)	0.0	
chr12	81723045	81723154	reg1029950.p1	4.688	+	TSC_hg19_v1_chr12_+_81471857 BC009317 BC015769 NM_024560 AK025616 AX764482	-251241	+	TSC_hg19_v1_chr12_-_81331487 AB528898 CR407680 BC099921 AK315321 BC046926 BC062332 BC118609 BC122561 AF087693 AF173081 NM_004664	-391509	-	TSC_hg19_v1_chr12_-_81331470 AK309256	-391632	-	AK123372 AK296380 NM_001220479 NM_001220480	40060	-	AK294505 AK297372 AK299853 NM_001220477 NM_001220478	268955	-	BC104912 BC143485 NM_001220475 NM_001220476 AK126971 TSC_hg19_v1_chr12_-_82152435 AB210009 NM_001220473 NM_001220474	429272	-	BC009317|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##BC015769|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##NM_024560|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AK025616|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AX764482|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)##BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)##AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)##BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)##BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)##BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)##BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)##AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)##AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)##NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)##AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)##AK123372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK296380|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220479|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220480|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC104912|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC143485|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220475|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220476|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK126971|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AB210009|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220473|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220474|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	0.0	
chr15	31754506	31754624	reg1027914.p1	4.688	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-135227	+	NM_001243538	-231516	-	GQ502181 HM135791 NM_001252020	-301137	-	AJ430383 NM_130901	192976	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	408264	-	TSC_hg19_v1_chr15_-_32162898 AK126002	408378	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.534681	CTCF.p2:-27:0.425
chr16	23193568	23193733	reg1000122.p1	4.688	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	-33101	-	AB209794 AF105374 AF105375 NM_006043 BC093734 BC093736	-367799	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	-368148	+	U48936 BC059391 NM_001039 TSC_hg19_v1_chr16_+_23194066	402	+	NM_000336 BC036352 X87159 AK313192	119977	+	TSC_hg19_v1_chr16_-_23464487 BC000549 BC037563 NM_153603	270845	-	AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31##AB209794|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105374|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105375|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_006043|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093734|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093736|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##U48936|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##BC059391|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_001039|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_000336|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC036352|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##X87159|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##AK313192|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC000549|COG7|91949|component of oligomeric golgi complex 7##BC037563|COG7|91949|component of oligomeric golgi complex 7##NM_153603|COG7|91949|component of oligomeric golgi complex 7	0.0	
chr20	61538883	61538979	reg1024745.p1	4.688	+	AF070992 AB012124 BC065520 BC046933 NM_006602 TSC_hg19_v1_chr20_-_61493138	-45875	-	NM_080750	-62456	+	TSC_hg19_v1_chr20_+_61448401 BC011705 NM_001853 DQ892946 DQ896194 L41162	-90528	+	TSC_hg19_v1_chr20_-_61557824 BC014615 BC014489	18890	-	TSC_hg19_v1_chr20_-_61557842 AY481571 AY481572	18925	-	TSC_hg19_v1_chr20_-_61557874 NM_001193369 NM_001193370 NM_080796	18957	-	AF070992|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##AB012124|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC065520|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC046933|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##NM_006602|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##NM_080750|DPH3P1|100132911|DPH3, KTI11 homolog (S. cerevisiae) pseudogene 1##BC011705|COL9A3|1299|collagen, type IX, alpha 3##NM_001853|COL9A3|1299|collagen, type IX, alpha 3##DQ892946|COL9A3|1299|collagen, type IX, alpha 3##DQ896194|COL9A3|1299|collagen, type IX, alpha 3##L41162|COL9A3|1299|collagen, type IX, alpha 3##BC014615|DIDO1|11083|death inducer-obliterator 1##BC014489|DIDO1|11083|death inducer-obliterator 1##AY481571|DIDO1|11083|death inducer-obliterator 1##AY481572|DIDO1|11083|death inducer-obliterator 1##NM_001193369|DIDO1|11083|death inducer-obliterator 1##NM_001193370|DIDO1|11083|death inducer-obliterator 1##NM_080796|DIDO1|11083|death inducer-obliterator 1	1.004016	CTCF.p2:-6:0.981
chr22	17264870	17264995	reg1030303.p2	4.688	+	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	-191363	-	NM_001005239	-815129	-	BC127623 AY465171 AY465172 AY466021 NM_001136213	-977006	-	BC137521 BC137522 BC144679 AY989815 AK098608 AY534240 BC045548 NM_175878	37637	-	AB076978 NM_001037814	224179	-	TSC_hg19_v1_chr22_+_17565850 NM_014339	300919	+	BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_001005239|OR11H1|81061|olfactory receptor, family 11, subfamily H, member 1##BC127623|POTEG|404785|POTE ankyrin domain family, member G##AY465171|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##AY466021|POTEH|23784|POTE ankyrin domain family, member H##NM_001136213|POTEH|23784|POTE ankyrin domain family, member H##BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AB076978|GAB4|128954|GRB2-associated binding protein family, member 4##NM_001037814|GAB4|128954|GRB2-associated binding protein family, member 4##NM_014339|IL17RA|23765|interleukin 17 receptor A	0.0	
chr4	17616152	17616246	reg1028913.p1	4.688	+	TSC_hg19_v1_chr4_+_17579121 AK298613 AK307723 AK225511 BC006199 AK298790	-37069	+	TSC_hg19_v1_chr4_+_17579057 BC065564 CR457128 AK022055	-37123	+	TSC_hg19_v1_chr4_+_17578852 NM_015907	-37317	+	TSC_hg19_v1_chr4_+_17616263 AF318059 AK313928 AF358829 NM_025205 BC011936 AF317680 DQ893391 DQ896713 AF317679 AF317678	67	+	AK308144 NM_015688	166935	-	BC050697 TSC_hg19_v1_chr4_-_17806917	190669	-	AK298613|LAP3|51056|leucine aminopeptidase 3##AK307723|LAP3|51056|leucine aminopeptidase 3##AK225511|LAP3|51056|leucine aminopeptidase 3##BC006199|LAP3|51056|leucine aminopeptidase 3##AK298790|LAP3|51056|leucine aminopeptidase 3##BC065564|LAP3|51056|leucine aminopeptidase 3##CR457128|LAP3|51056|leucine aminopeptidase 3##AK022055|LAP3|51056|leucine aminopeptidase 3##NM_015907|LAP3|51056|leucine aminopeptidase 3##AF318059|MED28|80306|mediator complex subunit 28##AK313928|MED28|80306|mediator complex subunit 28##AF358829|MED28|80306|mediator complex subunit 28##NM_025205|MED28|80306|mediator complex subunit 28##BC011936|MED28|80306|mediator complex subunit 28##AF317680|MED28|80306|mediator complex subunit 28##DQ893391|MED28|80306|mediator complex subunit 28##DQ896713|MED28|80306|mediator complex subunit 28##AF317679|MED28|80306|mediator complex subunit 28##AF317678|MED28|80306|mediator complex subunit 28##AK308144|FAM184B|27146|family with sequence similarity 184, member B##NM_015688|FAM184B|27146|family with sequence similarity 184, member B##BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16	0.013128	
chr4	65955514	65955580	reg1027701.p1	4.688	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	-680451	-	NM_015236	-3592709	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-3888572	+	AK307826 NM_004439 NM_182472	580105	-	TSC_hg19_v1_chr4_-_66536182 AB209375	580650	-	CU688992 TSC_hg19_v1_chr4_-_68411171	2455576	-	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.0	
chr4	78230144	78230261	reg1028983.p1	4.688	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-150709	+	TSC_hg19_v1_chr4_+_78078398 U47414	-151742	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	-151841	+	AF044197 NM_006419	202703	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	510342	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	553712	+	L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1	0.994041	CTCF.p2:3:0.994
chr5	23812909	23813069	reg1031546.p2	4.688	+	DQ388610 NM_020227 AK301776	-305246	+	L33477 NM_004061	-959259	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-959543	-	NM_006727	832095	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	3225682	-	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	3659414	+	DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401	0.799889	CTCF.p2:9:0.800
chr5	35815795	35815910	reg1028432.p2	4.688	+	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	-197843	+	NM_000949	-585030	-	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	-585275	-	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	41181	+	NM_001042625 BC017586 NM_144647	122956	-	CU686633 BC068446 AK308046 AK290809 AK057066 AK303770 AK315851 AK296136 NM_152404	175586	-	BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##NM_000949|PRLR|5618|prolactin receptor##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like##BC068446|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK308046|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK290809|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK057066|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK303770|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK315851|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK296136|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_152404|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	0.0	
chr10	115753482	115753620	reg1031681.p1	4.687	+	TSC_hg19_v1_chr10_+_115614419 NM_198514 AK090631 AX746547	-139132	+	D42045 NM_014881 AK307187	-139635	-	BC037870 FJ236306 NM_182601	-228974	+	NM_000684 J03019	50258	+	TSC_hg19_v1_chr10_-_115933963 BC100670 BC103499 BC103504 BC105632 BC152306 BC107430 BC070368 BX537964 AK307517 AK092620 AX747632 BC020842 BC030557	180381	-	NM_018017	180812	-	NM_198514|NHLRC2|374354|NHL repeat containing 2##AK090631|NHLRC2|374354|NHL repeat containing 2##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A##BC037870|C10orf81|79949|chromosome 10 open reading frame 81##FJ236306|C10orf81|79949|chromosome 10 open reading frame 81##NM_182601|C10orf81|79949|chromosome 10 open reading frame 81##NM_000684|ADRB1|153|adrenergic, beta-1-, receptor##J03019|ADRB1|153|adrenergic, beta-1-, receptor##BC100670|C10orf118|55088|chromosome 10 open reading frame 118##BC103499|C10orf118|55088|chromosome 10 open reading frame 118##BC103504|C10orf118|55088|chromosome 10 open reading frame 118##BC105632|C10orf118|55088|chromosome 10 open reading frame 118##BC152306|C10orf118|55088|chromosome 10 open reading frame 118##BC107430|C10orf118|55088|chromosome 10 open reading frame 118##BC070368|C10orf118|55088|chromosome 10 open reading frame 118##BX537964|C10orf118|55088|chromosome 10 open reading frame 118##AK307517|C10orf118|55088|chromosome 10 open reading frame 118##AK092620|C10orf118|55088|chromosome 10 open reading frame 118##BC020842|C10orf118|55088|chromosome 10 open reading frame 118##BC030557|C10orf118|55088|chromosome 10 open reading frame 118##NM_018017|C10orf118|55088|chromosome 10 open reading frame 118	0.0	
chr10	91413325	91413442	reg1027802.p2	4.687	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-8059	-	TSC_hg19_v1_chr10_-_91404973 AK125428	-8440	-	AF355198 AY027662 AY027663 NM_138316 NM_148978	-9745	-	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	47992	+	TSC_hg19_v1_chr10_+_91498725 AK025628	85384	+	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	1204063	-	AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AK125428|PANK1|53354|pantothenate kinase 1##AF355198|PANK1|53354|pantothenate kinase 1##AY027662|PANK1|53354|pantothenate kinase 1##AY027663|PANK1|53354|pantothenate kinase 1##NM_138316|PANK1|53354|pantothenate kinase 1##NM_148978|PANK1|53354|pantothenate kinase 1##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AK025628|KIF20B|9585|kinesin family member 20B##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)	0.0	
chr16	19305686	19305857	reg1030775.p1	4.687	+	TSC_hg19_v1_chr16_+_19179561 NM_016524 BC004518 AF220560 AB527504 CU678742	-126020	+	TSC_hg19_v1_chr16_+_19125253 AK096327 NM_001034841	-180523	+	TSC_hg19_v1_chr16_+_19079232 AL136647 NM_001190983 BC043272	-226506	+	BC070101 NM_001105248 NM_001105249	116285	+	AY236494 NM_024780 BC038118 AK097718 BC027602 AK131202	162033	+	AY463154 BC014981 TSC_hg19_v1_chr16_-_19533421 AF306698 BC025273 BC001538 AF212862 BC012153 AK312912 NM_016641	227605	-	NM_016524|SYT17|51760|synaptotagmin XVII##BC004518|SYT17|51760|synaptotagmin XVII##AF220560|SYT17|51760|synaptotagmin XVII##AK096327|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##NM_001034841|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##AL136647|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_001190983|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC043272|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC070101|TMC5|79838|transmembrane channel-like 5##NM_001105248|TMC5|79838|transmembrane channel-like 5##NM_001105249|TMC5|79838|transmembrane channel-like 5##AY236494|TMC5|79838|transmembrane channel-like 5##NM_024780|TMC5|79838|transmembrane channel-like 5##BC038118|TMC5|79838|transmembrane channel-like 5##AK097718|TMC5|79838|transmembrane channel-like 5##BC027602|TMC5|79838|transmembrane channel-like 5##AK131202|TMC5|79838|transmembrane channel-like 5##AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1##NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1	0.0	
chr2	180707342	180707454	reg1026239.p2	4.687	+	AK096822 NM_001113397	-96630	-	AK057999 NM_001113398	-280084	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	-577993	-	TSC_hg19_v1_chr2_-_180726048 AK131432 BC033042	18649	-	BC092423 TSC_hg19_v1_chr2_-_180726080	18675	-	TSC_hg19_v1_chr2_-_180726110 NM_152520	18767	-	AK096822|ZNF385B|151126|zinc finger protein 385B##NM_001113397|ZNF385B|151126|zinc finger protein 385B##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AK131432|ZNF385B|151126|zinc finger protein 385B##BC033042|ZNF385B|151126|zinc finger protein 385B##BC092423|ZNF385B|151126|zinc finger protein 385B##NM_152520|ZNF385B|151126|zinc finger protein 385B	0.991741	CTCF.p2:-10:0.992
chr22	22385358	22385539	reg1002960.p3	4.687	+	TSC_hg19_v1_chr22_+_22385369 AF026922	-83	+	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	-48262	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	-48301	-	X02422 TSC_hg19_v1_chr22_+_22550141	164681	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	164730	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	183816	+	AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57	0.0	
chr7	86297173	86297324	reg1029638.p1	4.687	+	X77748 TSC_hg19_v1_chr7_+_86274130 DQ315361 DQ315362 DQ315363	-23132	+	AK294701 TSC_hg19_v1_chr7_+_86274004 BC022496	-23257	+	AK291406 TSC_hg19_v1_chr7_+_86273870	-23377	+	AK296250 NM_152748	297998	-	TSC_hg19_v1_chr7_-_86688965 NM_001142749	391730	-	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	484465	+	X77748|GRM3|2913|glutamate receptor, metabotropic 3##DQ315361|GRM3|2913|glutamate receptor, metabotropic 3##DQ315362|GRM3|2913|glutamate receptor, metabotropic 3##DQ315363|GRM3|2913|glutamate receptor, metabotropic 3##AK294701|GRM3|2913|glutamate receptor, metabotropic 3##BC022496|GRM3|2913|glutamate receptor, metabotropic 3##AK291406|GRM3|2913|glutamate receptor, metabotropic 3##AK296250|KIAA1324L|222223|KIAA1324-like##NM_152748|KIAA1324L|222223|KIAA1324-like##NM_001142749|KIAA1324L|222223|KIAA1324-like##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1	0.24611	CTCF.p2:-5:0.246
chr8	64174584	64174713	reg1025398.p2	4.687	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-93448	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-93504	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-176021	-	NM_152414 AK293979	1318210	+	TSC_hg19_v1_chr8_+_65493611 AK091333	1319016	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	1536631	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.999933	CTCF.p2:2:1.000
chr10	87546198	87546311	reg1031815.p1	4.686	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-1361559	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-1414636	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-1457860	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	580009	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	735240	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	735276	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	1.173523	CTCF.p2:13:0.596	CTCF.p2:-27:0.513
chr13	107776603	107776706	reg1022506.p1	4.686	+	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	-556169	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	-589305	-	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-1658063	+	NM_001080396	742805	-	NM_002312 X83441	1090475	-	AK292419 AK314844 BC037491 NM_206937	1091221	-	BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A##NM_002312|LIG4|3981|ligase IV, DNA, ATP-dependent##X83441|LIG4|3981|ligase IV, DNA, ATP-dependent##AK292419|LIG4|3981|ligase IV, DNA, ATP-dependent##AK314844|LIG4|3981|ligase IV, DNA, ATP-dependent##BC037491|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_206937|LIG4|3981|ligase IV, DNA, ATP-dependent	0.644441	CTCF.p2:35:0.644
chr19	18280392	18280526	reg1021455.p1	4.686	+	TSC_hg19_v1_chr19_+_18264004 BC070082 NM_005027 BC090249	-16427	+	BC063240 TSC_hg19_v1_chr19_+_18263972	-16478	+	TSC_hg19_v1_chr19_+_18208608 AB527184 NM_015016 AB011133	-71850	+	NM_006332 TSC_hg19_v1_chr19_+_18284600 AB049659 AK291551	4132	+	TSC_hg19_v1_chr19_+_18284622 BC021136 BC031020 AF097362	4162	+	TSC_hg19_v1_chr19_+_18284633 AB590284 CU676848 CU689078 DQ884410 DQ892016 DQ895206	4182	+	BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_015016|MAST3|23031|microtubule associated serine/threonine kinase 3##AB011133|MAST3|23031|microtubule associated serine/threonine kinase 3##NM_006332|IFI30|10437|interferon, gamma-inducible protein 30##AB049659|IFI30|10437|interferon, gamma-inducible protein 30##AK291551|IFI30|10437|interferon, gamma-inducible protein 30##BC021136|IFI30|10437|interferon, gamma-inducible protein 30##BC031020|IFI30|10437|interferon, gamma-inducible protein 30##DQ884410|IFI30|10437|interferon, gamma-inducible protein 30##DQ892016|IFI30|10437|interferon, gamma-inducible protein 30##DQ895206|IFI30|10437|interferon, gamma-inducible protein 30	0.0	
chr3	120342001	120342124	reg1031624.p1	4.686	+	TSC_hg19_v1_chr3_+_120315182 BC070285 AF044957 DQ891096 DQ894273 DQ894278 BC034579	-26870	+	NM_001168331 NM_004547 BC000855 BC146885 BC146887 BC146927 BC146932 TSC_hg19_v1_chr3_+_120315168	-26915	+	TSC_hg19_v1_chr3_-_120169846 AB527652 D89937 BC000055 U06863 AK300356 AK289388 AK291138 AK311050 AK300436 BX647421 AK312261 NM_007085	-172225	-	CU687162 EU831603 EU831690 TSC_hg19_v1_chr3_-_120401087 BC071757 Z75048 U63008 AK290782 BC020792 AF045167	58981	-	AK313563 NM_000187	59347	-	TSC_hg19_v1_chr3_-_120461353 AB464115	119289	-	BC070285|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##AF044957|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ891096|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ894273|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##DQ894278|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC034579|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##NM_001168331|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##NM_004547|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC000855|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146885|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146887|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146927|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC146932|NDUFB4|4710|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 4, 15kDa##BC000055|FSTL1|11167|follistatin-like 1##U06863|FSTL1|11167|follistatin-like 1##AK300356|FSTL1|11167|follistatin-like 1##AK289388|FSTL1|11167|follistatin-like 1##AK291138|FSTL1|11167|follistatin-like 1##AK311050|FSTL1|11167|follistatin-like 1##AK300436|FSTL1|11167|follistatin-like 1##BX647421|FSTL1|11167|follistatin-like 1##AK312261|FSTL1|11167|follistatin-like 1##NM_007085|FSTL1|11167|follistatin-like 1##EU831603|HGD|3081|homogentisate 1,2-dioxygenase##EU831690|HGD|3081|homogentisate 1,2-dioxygenase##BC071757|HGD|3081|homogentisate 1,2-dioxygenase##Z75048|HGD|3081|homogentisate 1,2-dioxygenase##U63008|HGD|3081|homogentisate 1,2-dioxygenase##AK290782|HGD|3081|homogentisate 1,2-dioxygenase##BC020792|HGD|3081|homogentisate 1,2-dioxygenase##AF045167|HGD|3081|homogentisate 1,2-dioxygenase##AK313563|HGD|3081|homogentisate 1,2-dioxygenase##NM_000187|HGD|3081|homogentisate 1,2-dioxygenase	0.983683	CTCF.p2:0:0.984
chr5	146771544	146771652	reg1024153.p1	4.686	+	AK094580 NM_001112724 NM_145001 TSC_hg19_v1_chr5_+_146614587 AK315942 BC021666 AK299099	-156992	+	AK294659 NM_181677 NM_181678 AK295347	-310576	-	BC031790 NM_181674 NM_181676	-335954	-	CU691634 AB384367 EU832180 EU832273 TSC_hg19_v1_chr5_-_146833229 BC039006 D78014 AK297223 NM_001387 Y07818	61667	-	EU007906 CU687310 EU832163 EU832257 TSC_hg19_v1_chr5_-_146889506	117868	-	BC077077 NM_001197294 TSC_hg19_v1_chr5_-_146889632	118028	-	AK094580|STK32A|202374|serine/threonine kinase 32A##NM_001112724|STK32A|202374|serine/threonine kinase 32A##NM_145001|STK32A|202374|serine/threonine kinase 32A##AK315942|STK32A|202374|serine/threonine kinase 32A##BC021666|STK32A|202374|serine/threonine kinase 32A##AK299099|STK32A|202374|serine/threonine kinase 32A##AK294659|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181677|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181678|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##AK295347|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##BC031790|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181674|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##NM_181676|PPP2R2B|5521|protein phosphatase 2, regulatory subunit B, beta##EU832180|DPYSL3|1809|dihydropyrimidinase-like 3##EU832273|DPYSL3|1809|dihydropyrimidinase-like 3##BC039006|DPYSL3|1809|dihydropyrimidinase-like 3##D78014|DPYSL3|1809|dihydropyrimidinase-like 3##AK297223|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001387|DPYSL3|1809|dihydropyrimidinase-like 3##Y07818|DPYSL3|1809|dihydropyrimidinase-like 3##EU007906|DPYSL3|1809|dihydropyrimidinase-like 3##EU832163|DPYSL3|1809|dihydropyrimidinase-like 3##EU832257|DPYSL3|1809|dihydropyrimidinase-like 3##BC077077|DPYSL3|1809|dihydropyrimidinase-like 3##NM_001197294|DPYSL3|1809|dihydropyrimidinase-like 3	0.050993	
chr7	131229785	131229917	reg1029176.p1	4.686	+	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-217212	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	-217245	+	AK294384 NM_001145354	-434997	+	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	11512	-	TSC_hg19_v1_chr7_-_131833385 AL834504	603544	-	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	963069	-	BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##AL834504|PLXNA4|91584|plexin A4##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4	0.811644	CTCF.p2:-27:0.291	CTCF.p2:34:0.520
chr11	35164040	35164161	reg1031281.p1	4.685	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-3240	+	TSC_hg19_v1_chr11_+_35160821 M59040	-3282	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	-3366	+	TSC_hg19_v1_chr11_+_35198199 AK129808	34112	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	114725	-	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	276611	-	AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##AK129808|CD44|960|CD44 molecule (Indian blood group)##CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.991239	CTCF.p2:8:0.991
chr12	31330607	31330699	reg1030463.p2	4.685	+	BC047317 BC050522 X99583 AK303139 TSC_hg19_v1_chr12_+_31226840 U33833 U75967 BC001591	-103780	+	TSC_hg19_v1_chr12_+_31226805 U75968 BC011264	-103845	+	TSC_hg19_v1_chr12_+_31226789 BC148224 BC111733 NM_004399 NM_030653 NM_152438 AK297607 BC050069	-103875	+	TSC_hg19_v1_chr12_-_31477084 AK294457	146434	-	BC071966 TSC_hg19_v1_chr12_-_31479052 BC004462 AK027736 AF087885 AK026932 AL157432	148405	-	TSC_hg19_v1_chr12_-_31479085 AF212220	148448	-	BC047317|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050522|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##X99583|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK303139|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U33833|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75967|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC001591|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75968|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC011264|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC148224|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_004399|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_030653|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_152438|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK297607|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050069|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK294457|FAM60A|58516|family with sequence similarity 60, member A##BC071966|FAM60A|58516|family with sequence similarity 60, member A##BC004462|FAM60A|58516|family with sequence similarity 60, member A##AF087885|FAM60A|58516|family with sequence similarity 60, member A##AK026932|FAM60A|58516|family with sequence similarity 60, member A##AL157432|FAM60A|58516|family with sequence similarity 60, member A##AF212220|FAM60A|58516|family with sequence similarity 60, member A	0.181586	
chr14	50505129	50505256	reg1020738.p1	4.685	+	AK091232 AX746864 NM_001012706	-30955	-	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-144786	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-145359	+	AF390030 NM_001014830	54168	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	78078	-	TSC_hg19_v1_chr14_-_50697940 L13858 HQ258542 AB463275 BC117261 BC143366 BC143367	192791	-	AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D##L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)##HQ258542|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)	0.0	
chr14	77243134	77243246	reg1036074.p1	4.685	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	-14138	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	-14735	+	TSC_hg19_v1_chr14_+_77227817 AK094330	-15390	+	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	36020	-	TSC_hg19_v1_chr14_-_77279257 NM_015305	36072	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	49605	+	BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B	0.783261	CTCF.p2:6:0.783
chr16	33457340	33457449	reg1027841.p1	4.685	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-195261	+	AL133588 NM_016212	-195880	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-251796	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	13197878	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	13197912	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	13265668	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.985493	CTCF.p2:9:0.985
chr19	11694907	11695088	reg1028637.p2	4.685	+	BC111014 TSC_hg19_v1_chr19_-_11689776 AK307164 NM_001111035 NM_001111036	-5215	-	AK225912 NM_001111034	-5406	-	TSC_hg19_v1_chr19_-_11688516 AK290717 NM_001611	-6467	-	NM_145295 BC098416 AK095639 BC006279 AK074846 BC069232	13294	+	X51760 BC052597 AK308189 NM_001080493 AK300579 AK303213	154761	-	NM_152355 TSC_hg19_v1_chr19_+_11877884 AK095956	182863	+	BC111014|ACP5|54|acid phosphatase 5, tartrate resistant##AK307164|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111035|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111036|ACP5|54|acid phosphatase 5, tartrate resistant##AK225912|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111034|ACP5|54|acid phosphatase 5, tartrate resistant##AK290717|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001611|ACP5|54|acid phosphatase 5, tartrate resistant##NM_145295|ZNF627|199692|zinc finger protein 627##BC098416|ZNF627|199692|zinc finger protein 627##AK095639|ZNF627|199692|zinc finger protein 627##BC006279|ZNF627|199692|zinc finger protein 627##AK074846|ZNF627|199692|zinc finger protein 627##BC069232|ZNF627|199692|zinc finger protein 627##X51760|ZNF823|55552|zinc finger protein 823##BC052597|ZNF823|55552|zinc finger protein 823##AK308189|ZNF823|55552|zinc finger protein 823##NM_001080493|ZNF823|55552|zinc finger protein 823##AK300579|ZNF823|55552|zinc finger protein 823##AK303213|ZNF823|55552|zinc finger protein 823##NM_152355|ZNF441|126068|zinc finger protein 441##AK095956|ZNF441|126068|zinc finger protein 441	0.0	
chr5	75605033	75605120	reg1026119.p2	4.685	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-225805	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-591816	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	-596814	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	94040	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	314069	-	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	406880	+	AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor	0.55642	CTCF.p2:11:0.556
chr6	69282555	69282667	reg1025134.p1	4.685	+	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	-683583	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	-2865518	-	AY358133 NM_198283 AK310478	-2992906	-	AL833240 TSC_hg19_v1_chr6_-_69345026	62361	-	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	62790	+	TSC_hg19_v1_chr6_-_70506472 AB074281	1223866	-	AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3##AB074281|LMBRD1|55788|LMBR1 domain containing 1	0.537666	CTCF.p2:-6:0.538
chr9	132175169	132175349	reg1021760.p1	4.685	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-91964	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-234719	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-234752	-	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	76095	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	76182	+	BC112353 AK093122 AX747938 NM_199350	207778	-	AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50	0.0	
chr16	59226594	59226737	reg1030728.p2	4.684	+	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-458468	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-508009	-	TSC_hg19_v1_chr16_-_58663742 BC040523 AL833549 NM_016284 NM_206999	-562920	-	AK124734 NM_001796	2844073	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	5929237	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	5929303	-	DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.954888	CTCF.p2:-10:0.955
chr17	43451007	43451125	reg1030505.p1	4.684	+	TSC_hg19_v1_chr17_-_43394387 BC035576 BC022296 AK290203 AK313085 NM_003954	-56691	-	BC028124 AF433663 AK302184 AK058143 NM_152343	-111611	-	TSC_hg19_v1_chr17_+_43325300 AK311429	-125762	+	TSC_hg19_v1_chr17_-_43487753 AK092891 AX747793 AK300880	36684	-	TSC_hg19_v1_chr17_-_43503000 AK125535 NM_199282	51935	-	TSC_hg19_v1_chr17_-_43510237 AK290650	59161	-	BC035576|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC022296|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK290203|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK313085|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##NM_003954|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC028124|C17orf46|124783|chromosome 17 open reading frame 46##AF433663|C17orf46|124783|chromosome 17 open reading frame 46##AK302184|C17orf46|124783|chromosome 17 open reading frame 46##AK058143|C17orf46|124783|chromosome 17 open reading frame 46##NM_152343|C17orf46|124783|chromosome 17 open reading frame 46##AK311429|LOC100133991|100133991|uncharacterized LOC100133991##AK092891|ARHGAP27|201176|Rho GTPase activating protein 27##AK300880|ARHGAP27|201176|Rho GTPase activating protein 27##AK125535|ARHGAP27|201176|Rho GTPase activating protein 27##NM_199282|ARHGAP27|201176|Rho GTPase activating protein 27##AK290650|ARHGAP27|201176|Rho GTPase activating protein 27	0.0	
chr3	105556115	105556295	reg1025096.p4	4.684	+	CR749655 TSC_hg19_v1_chr3_-_105421064	-135151	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-470383	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	-470625	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	31602	-	TSC_hg19_v1_chr3_-_106959482 BC036229	1403274	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	1403387	+	CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595	0.0	
chr1	29083519	29083611	reg1030649.p1	4.683	+	TSC_hg19_v1_chr1_+_29063503 AK303833 NM_001172828 AF432214 AF155095 AF192968 DQ892157 DQ895352 CU678040 AB451335 AB451484	-20028	+	NM_001173128 NM_016258 BC002559 AK292581 TSC_hg19_v1_chr1_+_29063435	-20282	+	BC001473 AK315195 AK315436 AF173868 AF203694 AK023126 TSC_hg19_v1_chr1_+_28995361	-88237	+	NM_000911 U07882	55088	+	TSC_hg19_v1_chr1_+_29213611 AB209649 NM_001166005 NM_001166007 NM_004437 NM_203342 NM_203343	130026	+	TSC_hg19_v1_chr1_+_29213624 M14993 M61733 J03796	130092	+	AK303833|YTHDF2|51441|YTH domain family, member 2##NM_001172828|YTHDF2|51441|YTH domain family, member 2##AF432214|YTHDF2|51441|YTH domain family, member 2##AF155095|YTHDF2|51441|YTH domain family, member 2##AF192968|YTHDF2|51441|YTH domain family, member 2##DQ892157|YTHDF2|51441|YTH domain family, member 2##DQ895352|YTHDF2|51441|YTH domain family, member 2##AB451335|YTHDF2|51441|YTH domain family, member 2##AB451484|YTHDF2|51441|YTH domain family, member 2##NM_001173128|YTHDF2|51441|YTH domain family, member 2##NM_016258|YTHDF2|51441|YTH domain family, member 2##BC002559|YTHDF2|51441|YTH domain family, member 2##AK292581|YTHDF2|51441|YTH domain family, member 2##BC001473|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK315195|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK315436|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AF173868|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AF203694|GMEB1|10691|glucocorticoid modulatory element binding protein 1##AK023126|GMEB1|10691|glucocorticoid modulatory element binding protein 1##NM_000911|OPRD1|4985|opioid receptor, delta 1##U07882|OPRD1|4985|opioid receptor, delta 1##AB209649|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166005|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166007|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_004437|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203342|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203343|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M14993|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M61733|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##J03796|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	0.979175	CTCF.p2:-5:0.979
chr14	89882378	89882558	reg1027025.p1	4.683	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-3692	-	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-591475	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-623258	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	942	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	203127	-	BC001787 BX247991 AK298930 AK094740 NM_145231	538592	-	EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11	0.0	
chr15	80711394	80711486	reg1028898.p2	4.683	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	-14706	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-266064	+	TSC_hg19_v1_chr15_+_80445268 D28440 NM_000137 AK313951	-266188	+	AK295763 TSC_hg19_v1_chr15_+_80733623	22165	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	276222	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	276569	+	BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##D28440|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##NM_000137|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK313951|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1	0.936346	CTCF.p2:1:0.936
chr1	9747386	9747561	reg1029815.p2	4.683	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	-35669	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-98517	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-147837	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	136422	-	TSC_hg19_v1_chr1_-_9884023 AK304813	136548	-	TSC_hg19_v1_chr1_-_9884024 BC033902	136571	-	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1	0.0	
chr2	191184715	191184843	reg1029250.p2	4.683	+	NM_014362 NM_198047	-9	-	TSC_hg19_v1_chr2_-_191184553 AK222979 AK223023 AK308042 BC067822 AK313651 U66669 BC005190	-240	-	NM_001042519 BC005083 NM_032321 AK313395	-139139	+	NM_001128928 NM_002194 TSC_hg19_v1_chr2_+_191208270	23457	+	TSC_hg19_v1_chr2_+_191208326 AK093560	23595	+	TSC_hg19_v1_chr2_+_191208645 BC106006	23877	+	NM_014362|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_198047|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK222979|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK223023|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK308042|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##BC067822|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK313651|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##U66669|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##BC005190|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_001042519|C2orf88|84281|chromosome 2 open reading frame 88##BC005083|C2orf88|84281|chromosome 2 open reading frame 88##NM_032321|C2orf88|84281|chromosome 2 open reading frame 88##AK313395|C2orf88|84281|chromosome 2 open reading frame 88##NM_001128928|INPP1|3628|inositol polyphosphate-1-phosphatase##NM_002194|INPP1|3628|inositol polyphosphate-1-phosphatase##AK093560|INPP1|3628|inositol polyphosphate-1-phosphatase##BC106006|INPP1|3628|inositol polyphosphate-1-phosphatase	0.955869	CTCF.p2:9:0.956
chr3	151045505	151045619	reg1028359.p1	4.683	+	AF237763 BC112941 BC117565 AB031548 BC132888 BC132890 AK027784 NM_023915	-10988	-	BC034989 D13626 NM_014879	-49371	-	AK289617 NM_001081455	-78613	-	BC041116 JF810883 BC029363 AK313208 NM_176894	1760	-	AF313449 AF321815 NM_176876	12949	-	AK292096 AK303714 AK316575 TSC_hg19_v1_chr3_-_151102542 BC017898 NM_022788	56982	-	AF237763|GPR87|53836|G protein-coupled receptor 87##BC112941|GPR87|53836|G protein-coupled receptor 87##BC117565|GPR87|53836|G protein-coupled receptor 87##AB031548|GPR87|53836|G protein-coupled receptor 87##BC132888|GPR87|53836|G protein-coupled receptor 87##BC132890|GPR87|53836|G protein-coupled receptor 87##AK027784|GPR87|53836|G protein-coupled receptor 87##NM_023915|GPR87|53836|G protein-coupled receptor 87##BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##AK289617|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_001081455|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##BC041116|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##BC029363|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##AK313208|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##NM_176894|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##AF313449|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AF321815|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##NM_176876|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AK292096|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AK303714|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AK316575|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##BC017898|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##NM_022788|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	0.946305	CTCF.p2:-2:0.946
chr3	76635095	76635223	reg1028276.p1	4.683	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-800457	-	NM_001128223	-800905	-	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	-913673	+	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	454121	+	TSC_hg19_v1_chr3_-_78666943 AK025535	2031826	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	2433428	-	AK123776|ZNF717|100131827|zinc finger protein 717##NM_001128223|ZNF717|100131827|zinc finger protein 717##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)	0.243452	CTCF.p2:-22:0.243
chr3	81810118	81810216	reg1026909.p1	4.683	+	NM_002941	-1993109	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-2741580	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-3143182	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	530	-	TSC_hg19_v1_chr3_-_81810798 AK312245	631	-	TSC_hg19_v1_chr3_-_81810802 AK297939	638	-	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.0	
chr6	18749706	18749814	reg1033303.p1	4.683	+	AK096832 NM_182757 AB076367 BC063311 AL832329	-362093	+	X64229 TSC_hg19_v1_chr6_-_18264759 BC012442 AK312616 AK298089 AK294079 BC035259 AK297749 NM_001134709 NM_003472	-485039	-	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	-594105	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	1087875	+	TSC_hg19_v1_chr6_+_19838612 AF085889	1088923	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	1462912	-	AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##X64229|DEK|7913|DEK oncogene##BC012442|DEK|7913|DEK oncogene##AK312616|DEK|7913|DEK oncogene##AK298089|DEK|7913|DEK oncogene##AK294079|DEK|7913|DEK oncogene##BC035259|DEK|7913|DEK oncogene##AK297749|DEK|7913|DEK oncogene##NM_001134709|DEK|7913|DEK oncogene##NM_003472|DEK|7913|DEK oncogene##BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1	0.99826	CTCF.p2:6:0.998
chrX	32691431	32691553	reg1028951.p2	4.683	+	NM_004011 NM_004012	-261122	-	L35854 NM_004013 NM_004020 NM_004021 NM_004022 NM_004023	-517907	-	NM_004014 S62617	-1165078	-	NM_004010 S81419 NM_004009 S64152	455051	-	S60972 X14298 AK309142 TSC_hg19_v1_chrX_-_33229631 M18533 BC010932 NM_004006	538058	-	NM_000109	666233	-	NM_004011|DMD|1756|dystrophin##NM_004012|DMD|1756|dystrophin##L35854|DMD|1756|dystrophin##NM_004013|DMD|1756|dystrophin##NM_004020|DMD|1756|dystrophin##NM_004021|DMD|1756|dystrophin##NM_004022|DMD|1756|dystrophin##NM_004023|DMD|1756|dystrophin##NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin##NM_004010|DMD|1756|dystrophin##S81419|DMD|1756|dystrophin##NM_004009|DMD|1756|dystrophin##S64152|DMD|1756|dystrophin##S60972|DMD|1756|dystrophin##X14298|DMD|1756|dystrophin##AK309142|DMD|1756|dystrophin##M18533|DMD|1756|dystrophin##BC010932|DMD|1756|dystrophin##NM_004006|DMD|1756|dystrophin##NM_000109|DMD|1756|dystrophin	0.995363	CTCF.p2:-2:0.995
chr1	152896735	152896892	reg1027782.p1	4.682	+	AK300492 AK301649 NM_005547	-15783	+	AK312020 BC014593 NM_030663 BC016744 X89960	-46005	+	DQ991251 NM_001128600	-81484	+	NM_173080 BC112170 BC112172 BC069445 BC069549	46320	+	BC105081 BC105083 BC143782 NM_001199828 NM_005987	59750	+	NM_001097589 NM_005416 AK309626 AK311823 BC017802 EF553525 AJ243667 AY118269	77421	+	AK300492|IVL|3713|involucrin##NM_005547|IVL|3713|involucrin##AK312020|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##BC014593|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##NM_030663|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##BC016744|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##X89960|SMCP|4184|sperm mitochondria-associated cysteine-rich protein##DQ991251|LCE6A|448835|late cornified envelope 6A##NM_001128600|LCE6A|448835|late cornified envelope 6A##NM_173080|SPRR4|163778|small proline-rich protein 4##BC112170|SPRR4|163778|small proline-rich protein 4##BC112172|SPRR4|163778|small proline-rich protein 4##BC069445|SPRR4|163778|small proline-rich protein 4##BC069549|SPRR4|163778|small proline-rich protein 4##BC105081|SPRR1A|6698|small proline-rich protein 1A##BC105083|SPRR1A|6698|small proline-rich protein 1A##NM_001199828|SPRR1A|6698|small proline-rich protein 1A##NM_005987|SPRR1A|6698|small proline-rich protein 1A##NM_001097589|SPRR3|6707|small proline-rich protein 3##NM_005416|SPRR3|6707|small proline-rich protein 3##AK311823|SPRR3|6707|small proline-rich protein 3##BC017802|SPRR3|6707|small proline-rich protein 3##EF553525|SPRR3|6707|small proline-rich protein 3##AJ243667|SPRR3|6707|small proline-rich protein 3##AY118269|SPRR3|6707|small proline-rich protein 3	0.0	
chr11	642743	642820	reg1024336.p1	4.682	+	TSC_hg19_v1_chr11_+_637268 EU432112 L12398 NM_000797 S76942	-5495	+	NM_021920	-15609	-	AF276242 AF301909 TSC_hg19_v1_chr11_-_624945 AY358368 BC038405 AK000226 AK300991 AK308040 AK309157 AK000384 NM_001171968 NM_021924 NM_031264 AF258678 AF258679	-17747	-	AB489172 AF068892 AF068893 AF068894 AF068895 AF068896 AF068897 AF007165 TSC_hg19_v1_chr11_-_694998	52139	-	TSC_hg19_v1_chr11_-_695046 AK289873 EU831436 EU831528	52247	-	TSC_hg19_v1_chr11_-_695070 AF049459	52316	-	EU432112|DRD4|1815|dopamine receptor D4##L12398|DRD4|1815|dopamine receptor D4##NM_000797|DRD4|1815|dopamine receptor D4##S76942|DRD4|1815|dopamine receptor D4##NM_021920|SCT|6343|secretin##AF276242|CDHR5|53841|cadherin-related family member 5##AF301909|CDHR5|53841|cadherin-related family member 5##AY358368|CDHR5|53841|cadherin-related family member 5##BC038405|CDHR5|53841|cadherin-related family member 5##AK000226|CDHR5|53841|cadherin-related family member 5##AK300991|CDHR5|53841|cadherin-related family member 5##AK308040|CDHR5|53841|cadherin-related family member 5##AK309157|CDHR5|53841|cadherin-related family member 5##AK000384|CDHR5|53841|cadherin-related family member 5##NM_001171968|CDHR5|53841|cadherin-related family member 5##NM_021924|CDHR5|53841|cadherin-related family member 5##NM_031264|CDHR5|53841|cadherin-related family member 5##AF258678|CDHR5|53841|cadherin-related family member 5##AF258679|CDHR5|53841|cadherin-related family member 5##AF068892|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068893|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068894|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068895|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068896|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068897|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF007165|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AK289873|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##EU831436|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##EU831528|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF049459|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)	0.0	
chr13	103684032	103684213	reg1026116.p2	4.682	+	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-185636	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-185868	+	TSC_hg19_v1_chr13_+_103498240 NM_000123 BC031522 AF462447	-185913	+	NM_000452 U10417	35073	-	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	2434182	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	2434469	+	BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000123|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##BC031522|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AF462447|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator	0.0	
chr1	39568610	39568790	reg1003479.p2	4.682	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-21612	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	-76692	+	TSC_hg19_v1_chr1_+_39456956 NM_001136275 NM_024595 AK022728 AK092624 AX747634 AK124799 AK126262 AK223276 AK298890 AK303098 BC001498 BC119745 BC119746 AY326465	-111638	+	NM_015038	306475	+	TSC_hg19_v1_chr1_+_39922264 AK023821	353619	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	388645	+	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_001136275|AKIRIN1|79647|akirin 1##NM_024595|AKIRIN1|79647|akirin 1##AK022728|AKIRIN1|79647|akirin 1##AK092624|AKIRIN1|79647|akirin 1##AK124799|AKIRIN1|79647|akirin 1##AK126262|AKIRIN1|79647|akirin 1##AK223276|AKIRIN1|79647|akirin 1##AK298890|AKIRIN1|79647|akirin 1##AK303098|AKIRIN1|79647|akirin 1##BC001498|AKIRIN1|79647|akirin 1##BC119745|AKIRIN1|79647|akirin 1##BC119746|AKIRIN1|79647|akirin 1##AY326465|AKIRIN1|79647|akirin 1##NM_015038|KIAA0754|643314|KIAA0754##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a	0.0	
chr1	46799315	46799424	reg1026669.p1	4.682	+	TSC_hg19_v1_chr1_+_46769369 D28439 BC093060 BC001934 NM_006004 BC015177 BC107703 BC001426 AK311967 Y00764 M36647 BT007070	-29982	+	TSC_hg19_v1_chr1_-_46769053 NM_006369 AK297596	-30321	-	TSC_hg19_v1_chr1_-_46769016 AK291283 BC101522 BC101524	-30352	-	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	7074	+	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	60607	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	173303	+	D28439|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC093060|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001934|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006004|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC015177|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC107703|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001426|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##AK311967|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##Y00764|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##M36647|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BT007070|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006369|LRRC41|10489|leucine rich repeat containing 41##AK297596|LRRC41|10489|leucine rich repeat containing 41##AK291283|LRRC41|10489|leucine rich repeat containing 41##BC101522|LRRC41|10489|leucine rich repeat containing 41##BC101524|LRRC41|10489|leucine rich repeat containing 41##NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1	0.989932	CTCF.p2:-14:0.990
chr2	242067130	242067310	reg1030233.p2	4.682	+	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	-25494	-	NM_001080437	-128966	+	AK056601 NM_001085437	-231648	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	21651	-	AK308015 BC051689 TSC_hg19_v1_chr2_+_242089094	21838	+	CR749231 NM_001252120	22173	-	BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase##AK308015|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC051689|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##CR749231|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252120|PASK|23178|PAS domain containing serine/threonine kinase	0.0	
chr6	8708275	8708361	reg1022631.p1	4.682	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-272430	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-272610	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-605528	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	1704298	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	1706957	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	1707150	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.988154	CTCF.p2:-3:0.988
chr8	11403306	11403432	reg1025513.p1	4.682	+	S76617 NM_001715 BC018703 BC004473 BC038555	-51776	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-79140	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-198365	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	158351	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	223899	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	256815	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.23594	CTCF.p2:-5:0.236
chr11	67843964	67844068	reg1027831.p1	4.681	+	AF025374 NM_006053	-33570	+	TSC_hg19_v1_chr11_+_67806519 U45285 AY548967	-37472	+	TSC_hg19_v1_chr11_+_67806477 NM_006019 BC018133 BC032465	-37544	+	D10704 BC036471 TSC_hg19_v1_chr11_-_67888844	44741	-	NM_001277 NM_212469 TSC_hg19_v1_chr11_-_67888859	44872	-	TSC_hg19_v1_chr11_-_67981112 AF264782 BC002522 BC065287 BC087834 NM_016028 NM_017635 BC108304 AK314336 AK299201	136963	-	AF025374|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##NM_006053|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##U45285|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##AY548967|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##NM_006019|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##BC018133|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##BC032465|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##D10704|CHKA|1119|choline kinase alpha##BC036471|CHKA|1119|choline kinase alpha##NM_001277|CHKA|1119|choline kinase alpha##NM_212469|CHKA|1119|choline kinase alpha##AF264782|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC002522|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC065287|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC087834|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_016028|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_017635|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC108304|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK314336|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK299201|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)	0.336736	CTCF.p2:-21:0.337
chr11	78176564	78176745	reg1028555.p1	4.681	+	TSC_hg19_v1_chr11_-_78128866 NM_080491	-47778	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	-47848	-	AB011143 BC152459 NM_012296	-123729	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	109138	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	109241	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	975070	-	NM_080491|GAB2|9846|GRB2-associated binding protein 2##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)	0.0	
chr12	77558	77663	reg1029591.p1	4.681	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr12_+_175945 BC024764 NM_001170738	98350	+	AK091953 AX747275 NM_015232	108931	+	NM_003044 BC036838 BC026339 NM_001122847	245127	-	BC024764|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_001170738|IQSEC3|440073|IQ motif and Sec7 domain 3##AK091953|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_015232|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_003044|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC036838|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC026339|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001122847|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12	1.55885	CTCF.p2:6:0.949	CTCF.p2:-25:0.610
chr17	73760542	73760706	reg1013537.p1	4.681	+	BC109238 TSC_hg19_v1_chr17_+_73723807	-36853	+	NM_001005619 X52186 AF011375	-39845	+	BC118916 TSC_hg19_v1_chr17_+_73717603 AB208913	-43023	+	BT007005 CU674592 TSC_hg19_v1_chr17_-_73761274 U26401 AK316181 AK314890 AK303748 BC001166 AK130064 AK310203 NM_000154 AK303832	657	-	L05088 TSC_hg19_v1_chr17_-_73774461	13831	-	BC108701 AF218029 BC001124 BC006497 BC012813 BC017558 TSC_hg19_v1_chr17_-_73775861 BX647280 AK130772 AK304607 AK312762 BX537379 NM_005324	15217	-	BC109238|ITGB4|3691|integrin, beta 4##NM_001005619|ITGB4|3691|integrin, beta 4##X52186|ITGB4|3691|integrin, beta 4##AF011375|ITGB4|3691|integrin, beta 4##BC118916|ITGB4|3691|integrin, beta 4##AB208913|ITGB4|3691|integrin, beta 4##BT007005|GALK1|2584|galactokinase 1##U26401|GALK1|2584|galactokinase 1##AK316181|GALK1|2584|galactokinase 1##AK314890|GALK1|2584|galactokinase 1##AK303748|GALK1|2584|galactokinase 1##BC001166|GALK1|2584|galactokinase 1##AK130064|GALK1|2584|galactokinase 1##AK310203|GALK1|2584|galactokinase 1##NM_000154|GALK1|2584|galactokinase 1##AK303832|GALK1|2584|galactokinase 1##BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)##AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)##NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)	0.060213	
chr3	143254928	143255109	reg1028825.p1	4.681	+	BC067737 TSC_hg19_v1_chr3_+_142895211	-359847	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-416367	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-534588	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	312249	-	NM_173552 AK315082	435634	+	TSC_hg19_v1_chr3_+_143690915 BC037293	435972	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58	0.0	
chr4	73334747	73334883	reg1026628.p1	4.681	+	AK290937 NM_001144756 NM_053036 AF236083	-429945	+	AF119815 NM_004885 AK308069 AJ311393	-437246	+	AK223458 NM_001204306	-663579	-	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	99676	-	BC101684 BC143642 TSC_hg19_v1_chr4_-_73935431 AK096310 AY957564 AY957565 BC071812 NM_173827	600628	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	753964	-	AK290937|NPFFR2|10886|neuropeptide FF receptor 2##NM_001144756|NPFFR2|10886|neuropeptide FF receptor 2##NM_053036|NPFFR2|10886|neuropeptide FF receptor 2##AF236083|NPFFR2|10886|neuropeptide FF receptor 2##AF119815|NPFFR2|10886|neuropeptide FF receptor 2##NM_004885|NPFFR2|10886|neuropeptide FF receptor 2##AK308069|NPFFR2|10886|neuropeptide FF receptor 2##AJ311393|NPFFR2|10886|neuropeptide FF receptor 2##AK223458|GC|2638|group-specific component (vitamin D binding protein)##NM_001204306|GC|2638|group-specific component (vitamin D binding protein)##AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC101684|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC143642|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK096310|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957564|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957565|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC071812|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_173827|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17	0.996787	CTCF.p2:9:0.997
chr6	1424701	1424816	reg1026083.p1	4.681	+	NM_001452 U13220 AB463646	-34633	+	BC053850 NM_033260	-112084	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-731668	-	BC134421 NM_001453	185922	+	TSC_hg19_v1_chr6_+_1611545 BC169307	186816	+	AF040260 NM_001253846	751466	-	NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##BC169307|FOXC1|2296|forkhead box C1##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase	0.980072	CTCF.p2:-21:0.980
chr6	43464523	43464624	reg1031414.p1	4.681	+	AK127338 NM_001146017	-7306	+	TSC_hg19_v1_chr6_+_43445324 BC046239	-19225	+	TSC_hg19_v1_chr6_+_43445314 AK024269 AK123398	-19260	+	BC107130 TSC_hg19_v1_chr6_-_43478085 BC108661	13463	-	NM_001012974	13850	-	TSC_hg19_v1_chr6_-_43484665 AL050274 AB463356 AM393648 AM393729 AK021655 AK022757 AK021433 AF162672 AK000946 AK298150 AK308961 BC019297	20024	-	AK127338|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_001146017|TJAP1|93643|tight junction associated protein 1 (peripheral)##BC046239|TJAP1|93643|tight junction associated protein 1 (peripheral)##AK024269|TJAP1|93643|tight junction associated protein 1 (peripheral)##AK123398|TJAP1|93643|tight junction associated protein 1 (peripheral)##BC107130|LRRC73|221424|leucine rich repeat containing 73##BC108661|LRRC73|221424|leucine rich repeat containing 73##NM_001012974|LRRC73|221424|leucine rich repeat containing 73##AL050274|YIPF3|25844|Yip1 domain family, member 3##AM393648|YIPF3|25844|Yip1 domain family, member 3##AM393729|YIPF3|25844|Yip1 domain family, member 3##AK021655|YIPF3|25844|Yip1 domain family, member 3##AK022757|YIPF3|25844|Yip1 domain family, member 3##AK021433|YIPF3|25844|Yip1 domain family, member 3##AF162672|YIPF3|25844|Yip1 domain family, member 3##AK000946|YIPF3|25844|Yip1 domain family, member 3##AK298150|YIPF3|25844|Yip1 domain family, member 3##AK308961|YIPF3|25844|Yip1 domain family, member 3##BC019297|YIPF3|25844|Yip1 domain family, member 3	0.08405	
chr6	97497726	97497897	reg1030245.p1	4.681	+	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	-125188	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-152047	-	TSC_hg19_v1_chr6_-_97345751 BC018802 AF161474	-152059	-	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	233279	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	1784769	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	1784861	+	NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC018802|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF161474|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2	0.0	
chr6_mann_hap4	4549215	4549335	reg1032309.p1	4.681	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.98793	CTCF.p2:-4:0.988
chr1	1166179	1166311	reg1023833.p1	4.680	+	S76792 AB590584 X75962 BC040257 TSC_hg19_v1_chr1_-_1149534 BC105070 BC105072 NM_003327	-16724	-	AX781599 AX781601 AF117297 AF125304 AF241229 AX781595 AX781597 BT019531 BT019532 BC152381 BC152386 AY358877 NM_004195 NM_148901 NM_148902	-24235	-	AK093438 AX748126 NM_153254 BC126152 BC126154	-51153	+	TSC_hg19_v1_chr1_-_1167331 BC011244 AK299810 BC006211 BC008917	1064	-	TSC_hg19_v1_chr1_-_1167367 AK223079 AK222521 AK315517 AF132749	1119	-	TSC_hg19_v1_chr1_-_1167386 AK075352 BC022375 AK027277 AF153686 AF178986	1147	-	S76792|TNFRSF4|7293|tumor necrosis factor receptor superfamily, member 4##BC040257|TNFRSF4|7293|tumor necrosis factor receptor superfamily, member 4##BC105070|TNFRSF4|7293|tumor necrosis factor receptor superfamily, member 4##BC105072|TNFRSF4|7293|tumor necrosis factor receptor superfamily, member 4##NM_003327|TNFRSF4|7293|tumor necrosis factor receptor superfamily, member 4##AF117297|TNFRSF18|8784|tumor necrosis factor receptor superfamily, member 18##AF125304|TNFRSF18|8784|tumor necrosis factor receptor superfamily, member 18##AF241229|TNFRSF18|8784|tumor necrosis factor receptor superfamily, member 18##BT019531|TNFRSF18|8784|tumor necrosis factor receptor superfamily, member 18##BT019532|TNFRSF18|8784|tumor necrosis factor receptor superfamily, member 18##BC152381|TNFRSF18|8784|tumor necrosis factor receptor superfamily, member 18##BC152386|TNFRSF18|8784|tumor necrosis factor receptor superfamily, member 18##AY358877|TNFRSF18|8784|tumor necrosis factor receptor superfamily, member 18##NM_004195|TNFRSF18|8784|tumor necrosis factor receptor superfamily, member 18##NM_148901|TNFRSF18|8784|tumor necrosis factor receptor superfamily, member 18##NM_148902|TNFRSF18|8784|tumor necrosis factor receptor superfamily, member 18##AK093438|TTLL10|254173|tubulin tyrosine ligase-like family, member 10##NM_153254|TTLL10|254173|tubulin tyrosine ligase-like family, member 10##BC126152|TTLL10|254173|tubulin tyrosine ligase-like family, member 10##BC126154|TTLL10|254173|tubulin tyrosine ligase-like family, member 10##BC011244|SDF4|51150|stromal cell derived factor 4##AK299810|SDF4|51150|stromal cell derived factor 4##BC006211|SDF4|51150|stromal cell derived factor 4##BC008917|SDF4|51150|stromal cell derived factor 4##AK223079|SDF4|51150|stromal cell derived factor 4##AK222521|SDF4|51150|stromal cell derived factor 4##AK315517|SDF4|51150|stromal cell derived factor 4##AF132749|SDF4|51150|stromal cell derived factor 4##AK075352|SDF4|51150|stromal cell derived factor 4##BC022375|SDF4|51150|stromal cell derived factor 4##AK027277|SDF4|51150|stromal cell derived factor 4##AF153686|SDF4|51150|stromal cell derived factor 4##AF178986|SDF4|51150|stromal cell derived factor 4	0.0	
chr20	44575169	44575350	reg1030155.p1	4.680	+	TSC_hg19_v1_chr20_-_44563695 AK097925	-11565	-	TSC_hg19_v1_chr20_-_44563589 BC133006 BC133008	-11658	-	TSC_hg19_v1_chr20_+_44563323 NM_022104 AK299435 AB050014 AK056553 BC010005 BC013365	-11913	+	TSC_hg19_v1_chr20_-_44600828 AF395833 BC041331 BC142981 NM_022095	25551	-	TSC_hg19_v1_chr20_-_44600992 AK296989	25734	-	TSC_hg19_v1_chr20_+_44637546 AK298246 AK301446 AK311648 AK313137 AK316145 J05070 NM_004994 AK303080 BC006093 DQ896791 EU176415 AB528343 CU675241	62293	+	AK097925|FLJ40606|643549|uncharacterized LOC643549##BC133006|FLJ40606|643549|uncharacterized LOC643549##BC133008|FLJ40606|643549|uncharacterized LOC643549##NM_022104|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AK299435|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AB050014|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AK056553|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##BC010005|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##BC013365|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AF395833|ZNF335|63925|zinc finger protein 335##BC041331|ZNF335|63925|zinc finger protein 335##BC142981|ZNF335|63925|zinc finger protein 335##NM_022095|ZNF335|63925|zinc finger protein 335##AK296989|ZNF335|63925|zinc finger protein 335##AK298246|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK301446|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK313137|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK316145|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##J05070|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##NM_004994|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK303080|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##BC006093|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##DQ896791|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##EU176415|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)	0.0	
chr2	59098980	59099137	reg1026770.p1	4.680	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-630576	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-825070	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-825304	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	1681464	-	AF080216 TSC_hg19_v1_chr2_-_60780784	1681720	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	1884426	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.985201	CTCF.p2:26:0.985
chr3	4613537	4613625	reg1029326.p1	4.680	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-78385	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-78453	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-78550	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	407535	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	407600	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	407773	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.683045	CTCF.p2:10:0.683
chr4	101232462	101232642	reg1032417.p1	4.680	+	AL832277 BC013592 TSC_hg19_v1_chr4_-_101111626 AK312926 AK094236 NM_145244	-120922	-	TSC_hg19_v1_chr4_+_100871641 AK123926	-360906	+	TSC_hg19_v1_chr4_-_100871513 AK056803 NM_002106 BC103743	-361038	-	CU676062 AB590686 AB034695 AK222741 AK304568 AK291831 BC017781 AF205940 AK026875 AK313504 NM_001159694 NM_016242	206608	-	AB385587 AB451338 AB451487 AM393486 AM393713 CU693026 AY904364 BC025714 TSC_hg19_v1_chr4_-_102268080 L14778	1035474	-	TSC_hg19_v1_chr4_-_102268343 AL353950	1035820	-	AL832277|DDIT4L|115265|DNA-damage-inducible transcript 4-like##BC013592|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK312926|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK094236|DDIT4L|115265|DNA-damage-inducible transcript 4-like##NM_145244|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK123926|LOC256880|256880|uncharacterized LOC256880##AK056803|H2AFZ|3015|H2A histone family, member Z##NM_002106|H2AFZ|3015|H2A histone family, member Z##BC103743|H2AFZ|3015|H2A histone family, member Z##AB034695|EMCN|51705|endomucin##AK222741|EMCN|51705|endomucin##AK304568|EMCN|51705|endomucin##AK291831|EMCN|51705|endomucin##BC017781|EMCN|51705|endomucin##AF205940|EMCN|51705|endomucin##AK026875|EMCN|51705|endomucin##AK313504|EMCN|51705|endomucin##NM_001159694|EMCN|51705|endomucin##NM_016242|EMCN|51705|endomucin##AB451338|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AB451487|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393486|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393713|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AY904364|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##BC025714|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##L14778|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AL353950|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	0.803554	CTCF.p2:-25:0.804
chr4	119890557	119890695	reg1034245.p1	4.680	+	TSC_hg19_v1_chr4_+_119810008 AL833547 NM_001128933 NM_001128934 NM_133477 BC150629 AK307711 CR936673 AK304121 AL832031 AL833294 AL832363 BC136256 AM392848 AM393854 EU481975	-80542	+	TSC_hg19_v1_chr4_-_119757290 NM_014822	-133285	-	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	-133399	-	BX647849 TSC_hg19_v1_chr4_+_119947854	57209	+	FN422000 TSC_hg19_v1_chr4_+_119948273	57647	+	AJ010482 TSC_hg19_v1_chr4_+_119948327	57698	+	AL833547|SYNPO2|171024|synaptopodin 2##NM_001128933|SYNPO2|171024|synaptopodin 2##NM_001128934|SYNPO2|171024|synaptopodin 2##NM_133477|SYNPO2|171024|synaptopodin 2##BC150629|SYNPO2|171024|synaptopodin 2##AK307711|SYNPO2|171024|synaptopodin 2##CR936673|SYNPO2|171024|synaptopodin 2##AK304121|SYNPO2|171024|synaptopodin 2##AL832031|SYNPO2|171024|synaptopodin 2##AL833294|SYNPO2|171024|synaptopodin 2##AL832363|SYNPO2|171024|synaptopodin 2##BC136256|SYNPO2|171024|synaptopodin 2##AM392848|SYNPO2|171024|synaptopodin 2##AM393854|SYNPO2|171024|synaptopodin 2##EU481975|SYNPO2|171024|synaptopodin 2##NM_014822|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BX647849|SYNPO2|171024|synaptopodin 2##FN422000|SYNPO2|171024|synaptopodin 2##AJ010482|SYNPO2|171024|synaptopodin 2	0.760681	CTCF.p2:8:0.761
chr6	93486985	93487101	reg1028579.p2	4.680	+	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-2190205	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-2190360	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-2480431	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	642140	-	TSC_hg19_v1_chr6_-_96025325 BC047582	2538246	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	2538358	+	BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha	0.968594	CTCF.p2:10:0.969
chr8	82802796	82802913	reg1023512.p1	4.680	+	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	-48381	-	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-158095	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-169328	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	2292605	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	2292689	+	TSC_hg19_v1_chr8_+_85095702 AK095026	2292881	+	AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like	0.018414	
chr1	15930213	15930343	reg1032030.p2	4.679	+	DQ893530 DQ896746 TSC_hg19_v1_chr1_-_15911519 AY057097 AK027037 AK130034 AK225366 BC005090 NM_024758	-18738	-	TSC_hg19_v1_chr1_+_15853357 AK091848 AX747219 AB023179 NM_015291 CR749259 CR749567 AL833299 AK292479 BX648982	-76913	+	BC047363 TSC_hg19_v1_chr1_+_15853342	-76953	+	TSC_hg19_v1_chr1_+_15943952 AK293006 NM_032341	13674	+	TSC_hg19_v1_chr1_+_15944018 BC006011	13759	+	TSC_hg19_v1_chr1_+_15944063 CU675225	13833	+	DQ893530|AGMAT|79814|agmatine ureohydrolase (agmatinase)##DQ896746|AGMAT|79814|agmatine ureohydrolase (agmatinase)##AY057097|AGMAT|79814|agmatine ureohydrolase (agmatinase)##AK130034|AGMAT|79814|agmatine ureohydrolase (agmatinase)##AK225366|AGMAT|79814|agmatine ureohydrolase (agmatinase)##BC005090|AGMAT|79814|agmatine ureohydrolase (agmatinase)##NM_024758|AGMAT|79814|agmatine ureohydrolase (agmatinase)##AK091848|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##AB023179|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##NM_015291|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##CR749259|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##CR749567|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##AL833299|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##AK292479|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##BX648982|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##BC047363|DNAJC16|23341|DnaJ (Hsp40) homolog, subfamily C, member 16##AK293006|DDI2|84301|DNA-damage inducible 1 homolog 2 (S. cerevisiae)##NM_032341|DDI2|84301|DNA-damage inducible 1 homolog 2 (S. cerevisiae)##BC006011|DDI2|84301|DNA-damage inducible 1 homolog 2 (S. cerevisiae)	0.0	
chr13	40621399	40621580	reg1022045.p1	4.679	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-391628	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-444127	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-444162	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	619223	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	723803	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	723843	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.0	
chr14	93049713	93049804	reg1024720.p2	4.679	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-69799	+	NM_153646 AF520704 AF520705 BC069653	-259582	+	AK295059 NM_153647	-260222	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	68878	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	69065	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	165201	-	AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain	0.0	
chr6	26420942	26421047	reg1030561.p1	4.679	+	AK291162 NM_001145008 NM_001145009 NM_007048 NM_194441 AK290193 AK295720 TSC_hg19_v1_chr6_+_26402502 BC118586 BC121800 AK299327 BC065567 U90552 AK298652 Y07827	-18472	+	NM_001197238 NM_001197239 NM_001197240 NM_006995 NM_181531 AK304744 AK289883 AK293526 AK298570 U90550 BC017497 NM_001197237 BC014021	-37602	+	AF257505 NM_001197246	-52589	+	NM_001242803 NM_006994 NM_197974 AK291722 AK301553 AB209581 BC015815 AK223279 AK223301 U90548	19745	+	NM_001197234 NM_007049 NM_078476 TSC_hg19_v1_chr6_+_26458182 AK297098 NM_001197233 BC016661 AB209777 U90543	37196	+	U39576 BC096312 BC096313 BC096314 BC096315 NM_001732	80477	+	AK291162|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_001145008|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_001145009|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_007048|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_194441|BTN3A1|11119|butyrophilin, subfamily 3, member A1##AK290193|BTN3A1|11119|butyrophilin, subfamily 3, member A1##AK295720|BTN3A1|11119|butyrophilin, subfamily 3, member A1##BC118586|BTN3A1|11119|butyrophilin, subfamily 3, member A1##BC121800|BTN3A1|11119|butyrophilin, subfamily 3, member A1##AK299327|BTN3A1|11119|butyrophilin, subfamily 3, member A1##BC065567|BTN3A1|11119|butyrophilin, subfamily 3, member A1##U90552|BTN3A1|11119|butyrophilin, subfamily 3, member A1##AK298652|BTN3A1|11119|butyrophilin, subfamily 3, member A1##Y07827|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_001197238|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197239|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197240|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_006995|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_181531|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK304744|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK289883|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK293526|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK298570|BTN2A2|10385|butyrophilin, subfamily 2, member A2##U90550|BTN2A2|10385|butyrophilin, subfamily 2, member A2##BC017497|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197237|BTN2A2|10385|butyrophilin, subfamily 2, member A2##BC014021|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AF257505|BTN3A2|11118|butyrophilin, subfamily 3, member A2##NM_001197246|BTN3A2|11118|butyrophilin, subfamily 3, member A2##NM_001242803|BTN3A3|10384|butyrophilin, subfamily 3, member A3##NM_006994|BTN3A3|10384|butyrophilin, subfamily 3, member A3##NM_197974|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK291722|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK301553|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AB209581|BTN3A3|10384|butyrophilin, subfamily 3, member A3##BC015815|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK223279|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK223301|BTN3A3|10384|butyrophilin, subfamily 3, member A3##U90548|BTN3A3|10384|butyrophilin, subfamily 3, member A3##NM_001197234|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_007049|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_078476|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AK297098|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_001197233|BTN2A1|11120|butyrophilin, subfamily 2, member A1##BC016661|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AB209777|BTN2A1|11120|butyrophilin, subfamily 2, member A1##U90543|BTN2A1|11120|butyrophilin, subfamily 2, member A1##U39576|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096312|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096313|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096314|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096315|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001732|BTN1A1|696|butyrophilin, subfamily 1, member A1	0.934036	CTCF.p2:0:0.934
chr7	5601734	5601914	reg1029013.p1	4.679	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-31615	-	TSC_hg19_v1_chr7_-_5569235 BC012854 CU680416 EF095209 BC008633 DQ471327 AB385102 DQ890960 DQ894128 K00790	-32578	-	BC113036 TSC_hg19_v1_chr7_-_5568855	-32983	-	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	30614	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	30686	+	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	219398	-	X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##BC012854|ACTB|60|actin, beta##EF095209|ACTB|60|actin, beta##BC008633|ACTB|60|actin, beta##DQ471327|ACTB|60|actin, beta##DQ890960|ACTB|60|actin, beta##DQ894128|ACTB|60|actin, beta##K00790|ACTB|60|actin, beta##BC113036|ACTB|60|actin, beta##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216	0.0	
chr8	139711221	139711337	reg1028076.p1	4.679	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-202173	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-3241078	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-3241621	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	214965	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	1004003	-	AB067469 TSC_hg19_v1_chr8_-_141467841	1756546	-	AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9	0.999159	CTCF.p2:11:0.999
chr9	130650238	130650374	reg1028255.p1	4.679	+	BC001116 BC036803 AK313758 TSC_hg19_v1_chr9_-_130639955 BC100022 NM_000476	-10326	-	TSC_hg19_v1_chr9_-_130617036 NM_000118 NM_001114753	-33279	-	TSC_hg19_v1_chr9_-_130616968 AK222669 AK302455	-33331	-	AK300534 TSC_hg19_v1_chr9_-_130659688 AK057100	9322	-	TSC_hg19_v1_chr9_-_130661803 AK226174	11493	-	TSC_hg19_v1_chr9_-_130661867 BC006564 BC007802 BC016299 NM_013443	11541	-	BC001116|AK1|203|adenylate kinase 1##BC036803|AK1|203|adenylate kinase 1##AK313758|AK1|203|adenylate kinase 1##BC100022|AK1|203|adenylate kinase 1##NM_000476|AK1|203|adenylate kinase 1##NM_000118|ENG|2022|endoglin##NM_001114753|ENG|2022|endoglin##AK222669|ENG|2022|endoglin##AK302455|ENG|2022|endoglin##AK300534|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK057100|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK226174|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC006564|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC007802|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC016299|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##NM_013443|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	0.0	
chr12	112451224	112451313	reg1026037.p2	4.678	+	X94910 TSC_hg19_v1_chr12_+_112451266 CR541667	-3	+	TSC_hg19_v1_chr12_+_112451229 AK309426	-38	+	NM_001034025 NM_006817 TSC_hg19_v1_chr12_+_112451212 BC101493 BC101495	-82	+	TSC_hg19_v1_chr12_-_112546588 BC065481 AB054990 AK309772 AK307494 BC095484 BX647450 BC034357 BX641140 AK292485 BC113585 BC113587 NM_024953	95330	-	TSC_hg19_v1_chr12_+_112563341 AK309916 AK312601 NM_001143906 NM_006700	112054	+	TSC_hg19_v1_chr12_+_112563363 AK122620 AK291331 AK295474 AB007447	112123	+	X94910|ERP29|10961|endoplasmic reticulum protein 29##CR541667|ERP29|10961|endoplasmic reticulum protein 29##NM_001034025|ERP29|10961|endoplasmic reticulum protein 29##NM_006817|ERP29|10961|endoplasmic reticulum protein 29##BC101493|ERP29|10961|endoplasmic reticulum protein 29##BC101495|ERP29|10961|endoplasmic reticulum protein 29##BC065481|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##AB054990|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##AK309772|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##AK307494|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##BC095484|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##BX647450|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##BC034357|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##BX641140|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##AK292485|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##BC113585|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##BC113587|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##NM_024953|NAA25|80018|N(alpha)-acetyltransferase 25, NatB auxiliary subunit##AK309916|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK312601|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_001143906|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_006700|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK122620|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK291331|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK295474|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AB007447|TRAFD1|10906|TRAF-type zinc finger domain containing 1	0.772158	CTCF.p2:-15:0.772
chr14	69908837	69908958	reg1025550.p1	4.678	+	TSC_hg19_v1_chr14_+_69865419 BC047682	-43461	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	-43502	+	NM_001252151 NM_001252152 AK293222 AK316381 TSC_hg19_v1_chr14_+_69865137	-43779	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	42583	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	169413	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	169494	+	BC047682|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252151|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252152|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK293222|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK316381|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##D87434|KIAA0247|9766|KIAA0247	0.0	
chr18	67873224	67873404	reg1028264.p2	4.678	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-376	-	GU935335 GU935336 U56102 NM_006566	-249119	-	AK313199 TSC_hg19_v1_chr18_-_67615110	-258215	-	NM_004232 TSC_hg19_v1_chr18_+_67956194	82853	+	TSC_hg19_v1_chr18_+_67956280 BC020082	82947	+	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	2337461	-	BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##GU935335|CD226|10666|CD226 molecule##GU935336|CD226|10666|CD226 molecule##U56102|CD226|10666|CD226 molecule##NM_006566|CD226|10666|CD226 molecule##AK313199|CD226|10666|CD226 molecule##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC020082|SOCS6|9306|suppressor of cytokine signaling 6##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor	0.0	
chr21	28222594	28222775	reg1018815.p3	4.678	+	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	-4972	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	-5213	-	AY061853 AF401639 AK223576 AK313231 BC036761 AL833200 NM_052954 AK054581 AK304124	-277250	-	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	116755	-	TSC_hg19_v1_chr21_-_30257688 AB590951 BC011554 AK314100 AK225515 AF139682 NM_013240 NM_182749	2034979	-	BC007525 AB384515 TSC_hg19_v1_chr21_-_30365185 AF161350 AB018257 BC150284 AB621822 BC029371 BC140790 AK001915 BC031633 NM_015565	2142509	-	AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AY061853|CYYR1|116159|cysteine/tyrosine-rich 1##AF401639|CYYR1|116159|cysteine/tyrosine-rich 1##AK223576|CYYR1|116159|cysteine/tyrosine-rich 1##AK313231|CYYR1|116159|cysteine/tyrosine-rich 1##BC036761|CYYR1|116159|cysteine/tyrosine-rich 1##AL833200|CYYR1|116159|cysteine/tyrosine-rich 1##NM_052954|CYYR1|116159|cysteine/tyrosine-rich 1##AK054581|CYYR1|116159|cysteine/tyrosine-rich 1##AK304124|CYYR1|116159|cysteine/tyrosine-rich 1##AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##BC007525|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF161350|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AB018257|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC150284|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC029371|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC140790|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AK001915|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC031633|LTN1|26046|listerin E3 ubiquitin protein ligase 1##NM_015565|LTN1|26046|listerin E3 ubiquitin protein ligase 1	0.064661	
chr21	39641584	39641764	reg1031000.p2	4.678	+	D87291 NM_170736 AK292812	-12745	+	BC013327 NM_002243	-13011	+	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	-148273	-	NM_170737	2754	+	AB489170 AM392572 CU691828 EU446470 AK304662 AK303518 BC040168 AK300395 NM_001136155 NM_182918	228691	-	M21535 NM_001243429	315171	-	D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##NM_170737|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##M21535|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243429|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	0.0	
chr2	26458125	26458218	reg1030438.p1	4.678	+	AK090454 NM_001191033	-54587	+	AB124552 NM_001168241	-62212	+	AF086917 AF106681 BC000896 AB529109 AF297660 AF498945 CR457303 EU831649 EU831733 TSC_hg19_v1_chr2_+_26257540 AF091032	-200704	+	CU679263 DQ892776 DQ896023 FJ626228 TSC_hg19_v1_chr2_-_26467495 AK302532 AK293398 AK299258 AK313027 D16480 BC009235 GU727642 U04627	9310	-	TSC_hg19_v1_chr2_-_26467501 NM_000182	9411	-	NM_000183 TSC_hg19_v1_chr2_+_26467773 BC066963 BC017564	9528	+	AK090454|FAM59B|150946|family with sequence similarity 59, member B##NM_001191033|FAM59B|150946|family with sequence similarity 59, member B##AB124552|FAM59B|150946|family with sequence similarity 59, member B##NM_001168241|FAM59B|150946|family with sequence similarity 59, member B##AF086917|RAB10|10890|RAB10, member RAS oncogene family##AF106681|RAB10|10890|RAB10, member RAS oncogene family##BC000896|RAB10|10890|RAB10, member RAS oncogene family##AF297660|RAB10|10890|RAB10, member RAS oncogene family##AF498945|RAB10|10890|RAB10, member RAS oncogene family##CR457303|RAB10|10890|RAB10, member RAS oncogene family##EU831649|RAB10|10890|RAB10, member RAS oncogene family##EU831733|RAB10|10890|RAB10, member RAS oncogene family##AF091032|RAB10|10890|RAB10, member RAS oncogene family##DQ892776|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##DQ896023|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##FJ626228|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK302532|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK293398|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK299258|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##AK313027|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##D16480|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##BC009235|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##GU727642|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##U04627|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##NM_000182|HADHA|3030|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit##NM_000183|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##BC066963|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit##BC017564|HADHB|3032|hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), beta subunit	0.195246	
chr7	103164927	103165049	reg1031036.p1	4.678	+	TSC_hg19_v1_chr7_-_103086511 AF523354 AY256823 AY256824 AY256825 AK126898 NM_001167962 NM_198999 NM_206883 NM_206884 NM_206885	-78421	-	NM_001204453 NM_002803 TSC_hg19_v1_chr7_+_102988118 D11094 AK298821 AB075520 AK312648 AK298529 BC002589 AB527557 CU678056 EU446703	-176924	+	BC125057 BC139751 BC046351 X98260 TSC_hg19_v1_chr7_-_102985295 BC012376 BC062703 BC056682 BC032854 NM_001129887 NM_014377	-179795	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	465008	-	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	683443	-	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	804230	+	AF523354|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256823|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256824|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AY256825|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##AK126898|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_001167962|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_198999|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206883|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206884|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_206885|SLC26A5|375611|solute carrier family 26, member 5 (prestin)##NM_001204453|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##NM_002803|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##D11094|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK298821|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AB075520|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK312648|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##AK298529|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##BC002589|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##EU446703|PSMC2|5701|proteasome (prosome, macropain) 26S subunit, ATPase, 2##BC125057|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC139751|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC046351|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##X98260|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC012376|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC062703|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC056682|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##BC032854|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_001129887|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_014377|DNAJC2|27000|DnaJ (Hsp40) homolog, subfamily C, member 2##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3	0.780719	CTCF.p2:-22:0.781
chr8	21953151	21953271	reg1024141.p2	4.678	+	TSC_hg19_v1_chr8_+_21946730 AK294646	-6464	+	TSC_hg19_v1_chr8_+_21946666 AK126408 NM_022749 BC052237	-6533	+	TSC_hg19_v1_chr8_+_21924371 CU675345 DQ892779 DQ896026 EU832675 EU832755 BT007396	-28834	+	CU677759 AK026147 TSC_hg19_v1_chr8_-_21966936 BC016902 NM_024815	13677	-	TSC_hg19_v1_chr8_-_21988524 NM_005144 NM_018411	35379	-	AY562242 CR457353 AK025930 AF218014 AK302352 TSC_hg19_v1_chr8_-_21999400 BC050622 AK025899 AK172846 BC013048 NM_025232	46016	-	AK294646|FAM160B2|64760|family with sequence similarity 160, member B2##AK126408|FAM160B2|64760|family with sequence similarity 160, member B2##NM_022749|FAM160B2|64760|family with sequence similarity 160, member B2##BC052237|FAM160B2|64760|family with sequence similarity 160, member B2##DQ892779|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##DQ896026|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##EU832675|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##EU832755|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##BT007396|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##AK026147|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##BC016902|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##NM_024815|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##NM_005144|HR|55806|hairless homolog (mouse)##NM_018411|HR|55806|hairless homolog (mouse)##AY562242|REEP4|80346|receptor accessory protein 4##CR457353|REEP4|80346|receptor accessory protein 4##AK025930|REEP4|80346|receptor accessory protein 4##AF218014|REEP4|80346|receptor accessory protein 4##AK302352|REEP4|80346|receptor accessory protein 4##BC050622|REEP4|80346|receptor accessory protein 4##AK025899|REEP4|80346|receptor accessory protein 4##AK172846|REEP4|80346|receptor accessory protein 4##BC013048|REEP4|80346|receptor accessory protein 4##NM_025232|REEP4|80346|receptor accessory protein 4	0.0	
chr1	234859450	234859532	reg1026815.p1	4.677	+	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-114245	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-115633	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-115660	-	TSC_hg19_v1_chr1_-_234895746 AF193050	36283	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	432598	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	432740	-	BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.0	
chr17	75141938	75142119	reg1030097.p2	4.677	+	TSC_hg19_v1_chr17_+_75137104 AK290913 BC142979 BC136523 BC136525	-4893	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	-4994	+	NM_001204410 FM995496 AF130050	-56760	+	AK293206 NM_001144001	39266	+	NM_001113491 AF189713 TSC_hg19_v1_chr17_+_75277583 AJ312323 AK300270 AK300268 BC054004	135514	+	AK290368 NM_001113492 TSC_hg19_v1_chr17_+_75283980	141951	+	AK290913|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC142979|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136523|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136525|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001204410|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995496|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AF130050|LINC00338|654434|long intergenic non-protein coding RNA 338##AK293206|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001144001|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001113491|SEPT9|10801|septin 9##AF189713|SEPT9|10801|septin 9##AJ312323|SEPT9|10801|septin 9##AK300270|SEPT9|10801|septin 9##AK300268|SEPT9|10801|septin 9##BC054004|SEPT9|10801|septin 9##AK290368|SEPT9|10801|septin 9##NM_001113492|SEPT9|10801|septin 9	0.819225	CTCF.p2:-70:0.799
chr19	30181792	30181959	reg1004486.p1	4.677	+	TSC_hg19_v1_chr19_+_30156375 AK225814	-25454	+	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	-25526	+	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	-84686	+	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	24217	-	TSC_hg19_v1_chr19_-_30206402 NM_031448	24547	-	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	121026	+	NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1	0.0	
chr1	94339738	94339851	reg1029632.p1	4.677	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	-192467	-	TSC_hg19_v1_chr1_+_94057602 BC084562	-282187	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-282254	+	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	4920	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	4954	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	35168	-	U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit	0.975189	CTCF.p2:22:0.975
chr6	143888245	143888400	reg1029365.p1	4.677	+	CU678350 AK296485 BC003060 AK075458 TSC_hg19_v1_chr6_-_143832841 AY358551 BC051268 AK315475 NM_032020	-55428	-	TSC_hg19_v1_chr6_+_143771941 NM_003630 BC014551 BC015506 AB035307 AK025644 AK300907 AJ001625 AJ131389 AY277600 CR542062 CU677325	-116322	+	TSC_hg19_v1_chr6_-_143771811 BC037955 NM_182503	-116493	-	NM_001100166 NM_014721 AK300221 AB014580 BC152416 BC150630	41040	+	TSC_hg19_v1_chr6_+_143999112 AK298263 NM_001100164 NM_001100165 CR749345 AK297799	110855	+	TSC_hg19_v1_chr6_+_144164476 AK095269 BC009855 NM_032860	276167	+	AK296485|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC003060|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK075458|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AY358551|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC051268|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK315475|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_032020|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_003630|PEX3|8504|peroxisomal biogenesis factor 3##BC014551|PEX3|8504|peroxisomal biogenesis factor 3##BC015506|PEX3|8504|peroxisomal biogenesis factor 3##AB035307|PEX3|8504|peroxisomal biogenesis factor 3##AK025644|PEX3|8504|peroxisomal biogenesis factor 3##AK300907|PEX3|8504|peroxisomal biogenesis factor 3##AJ001625|PEX3|8504|peroxisomal biogenesis factor 3##AJ131389|PEX3|8504|peroxisomal biogenesis factor 3##AY277600|PEX3|8504|peroxisomal biogenesis factor 3##CR542062|PEX3|8504|peroxisomal biogenesis factor 3##BC037955|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_182503|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_001100166|PHACTR2|9749|phosphatase and actin regulator 2##NM_014721|PHACTR2|9749|phosphatase and actin regulator 2##AK300221|PHACTR2|9749|phosphatase and actin regulator 2##AB014580|PHACTR2|9749|phosphatase and actin regulator 2##BC152416|PHACTR2|9749|phosphatase and actin regulator 2##BC150630|PHACTR2|9749|phosphatase and actin regulator 2##AK298263|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100164|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100165|PHACTR2|9749|phosphatase and actin regulator 2##CR749345|PHACTR2|9749|phosphatase and actin regulator 2##AK297799|PHACTR2|9749|phosphatase and actin regulator 2##BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)##NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)	0.0	
chr8	65341616	65341737	reg1028222.p1	4.677	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-1260476	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-1260532	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-1343049	-	NM_152414 AK293979	151182	+	TSC_hg19_v1_chr8_+_65493611 AK091333	151988	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	369603	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.998836	CTCF.p2:-19:0.999
chr5	177978246	177978328	reg1026543.p1	4.676	+	TSC_hg19_v1_chr5_-_177659803 NM_153373	-318469	-	TSC_hg19_v1_chr5_-_177659788 BC039012 BC028002 BC067745 AK292061 BC037567 BC008009 BC088800 BC037238 BC110335	-318513	-	CU691508 TSC_hg19_v1_chr5_-_177659566 AK024076	-318705	-	AY158895 AY898961 NM_173465	39268	-	BC136261 BC143538 BC143547 TSC_hg19_v1_chr5_-_178054030 CR749504 BC065732 AK310427 BC063116 AK294921 BC015942 NM_020666 AK304614 AK311485	75742	-	TSC_hg19_v1_chr5_-_178054072 AK308879 AK309215 BC151233 AK308578	75793	-	NM_153373|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC039012|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC028002|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC067745|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AK292061|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC037567|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC008009|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC088800|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC037238|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##BC110335|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AK024076|AGXT2L2|85007|alanine-glyoxylate aminotransferase 2-like 2##AY158895|COL23A1|91522|collagen, type XXIII, alpha 1##AY898961|COL23A1|91522|collagen, type XXIII, alpha 1##NM_173465|COL23A1|91522|collagen, type XXIII, alpha 1##BC136261|CLK4|57396|CDC-like kinase 4##BC143538|CLK4|57396|CDC-like kinase 4##BC143547|CLK4|57396|CDC-like kinase 4##CR749504|CLK4|57396|CDC-like kinase 4##BC065732|CLK4|57396|CDC-like kinase 4##AK310427|CLK4|57396|CDC-like kinase 4##BC063116|CLK4|57396|CDC-like kinase 4##BC015942|CLK4|57396|CDC-like kinase 4##NM_020666|CLK4|57396|CDC-like kinase 4##AK304614|CLK4|57396|CDC-like kinase 4##AK311485|CLK4|57396|CDC-like kinase 4##AK308879|CLK4|57396|CDC-like kinase 4##BC151233|CLK4|57396|CDC-like kinase 4	0.992678	CTCF.p2:-17:0.993
chr7	143442610	143442693	reg1031636.p2	4.676	+	NM_001130026 AK296318	-29701	+	BC113530 BC117233 NM_173678 AY167570 BC010225	-124109	+	BC041464 AK315909 NM_001130025 AK098041 AK297123 AL832734 BC033189	-124589	+	BC110410 BC043153 NM_178561	12155	-	AK299911 TSC_hg19_v1_chr7_-_143582416 NM_001206941	139763	-	TSC_hg19_v1_chr7_-_143599249 AB018281 NM_014719 BC000609 AK291605 AK001640 NM_001206938	156614	-	NM_001130026|FAM115C|285966|family with sequence similarity 115, member C##AK296318|FAM115C|285966|family with sequence similarity 115, member C##BC113530|FAM115C|285966|family with sequence similarity 115, member C##BC117233|FAM115C|285966|family with sequence similarity 115, member C##NM_173678|FAM115C|285966|family with sequence similarity 115, member C##AY167570|FAM115C|285966|family with sequence similarity 115, member C##BC010225|LOC154761|154761|uncharacterized LOC154761##BC041464|LOC154761|154761|uncharacterized LOC154761##NM_001130025|FAM115C|285966|family with sequence similarity 115, member C##AK098041|FAM115C|285966|family with sequence similarity 115, member C##AK297123|LOC154761|154761|uncharacterized LOC154761##AL832734|FAM115C|285966|family with sequence similarity 115, member C##BC033189|LOC154761|154761|uncharacterized LOC154761##BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_178561|CTAGE6P|340307|CTAGE family, member 6, pseudogene##AK299911|FAM115A|9747|family with sequence similarity 115, member A##NM_001206941|FAM115A|9747|family with sequence similarity 115, member A##AB018281|FAM115A|9747|family with sequence similarity 115, member A##NM_014719|FAM115A|9747|family with sequence similarity 115, member A##BC000609|FAM115A|9747|family with sequence similarity 115, member A##AK291605|FAM115A|9747|family with sequence similarity 115, member A##AK001640|FAM115A|9747|family with sequence similarity 115, member A##NM_001206938|FAM115A|9747|family with sequence similarity 115, member A	0.065181	
chr7	26191521	26191658	reg1027840.p2	4.676	+	AB040290 AF330057 AF440392 NM_022150	-923509	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-971718	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-1026649	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	344	+	TSC_hg19_v1_chr7_-_26232151 BX538099	40562	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	48752	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.46478	CTCF.p2:52:0.465
chrX	62429151	62429260	reg1024772.p1	4.676	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-4492246	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-4810745	+	NM_007157	-4810937	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	141994	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	219062	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	351662	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.747441	CTCF.p2:3:0.747
chr11	95311378	95311474	reg1028697.p2	4.675	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	-347122	-	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-488414	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-511018	+	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	211225	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	211307	-	AK021591 TSC_hg19_v1_chr11_-_95522975 BC026013 NM_144664	211540	-	BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B##AK021591|FAM76B|143684|family with sequence similarity 76, member B##BC026013|FAM76B|143684|family with sequence similarity 76, member B##NM_144664|FAM76B|143684|family with sequence similarity 76, member B	0.0	
chr15	20400027	20400147	reg1028890.p1	4.675	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	311350	-	NM_001145004	347026	-	NM_207355 BC066981	671891	-	BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B	0.985493	CTCF.p2:-14:0.985
chr15	57309349	57309529	reg1032028.p2	4.675	+	TSC_hg19_v1_chr15_+_57210977 M83233	-98439	+	TSC_hg19_v1_chr15_+_57210901 BC050556 BC051769 M80627	-98537	+	TSC_hg19_v1_chr15_+_57210872 AL831981 AK294617 AK310708 AK312710	-98571	+	TSC_hg19_v1_chr15_+_57511630 AK294991 AK304007 AK311359 AK308101 NM_207040 BX537967 AM393573	202228	+	AK056673 AK307410 NM_001252335 NM_032866 TSC_hg19_v1_chr15_+_57668732 AY274808 BC030995 AY610514	359278	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	574726	+	M83233|TCF12|6938|transcription factor 12##BC050556|TCF12|6938|transcription factor 12##BC051769|TCF12|6938|transcription factor 12##M80627|TCF12|6938|transcription factor 12##AL831981|TCF12|6938|transcription factor 12##AK294617|TCF12|6938|transcription factor 12##AK310708|TCF12|6938|transcription factor 12##AK312710|TCF12|6938|transcription factor 12##AK294991|TCF12|6938|transcription factor 12##AK304007|TCF12|6938|transcription factor 12##AK311359|TCF12|6938|transcription factor 12##AK308101|TCF12|6938|transcription factor 12##NM_207040|TCF12|6938|transcription factor 12##BX537967|TCF12|6938|transcription factor 12##AM393573|TCF12|6938|transcription factor 12##AK056673|CGNL1|84952|cingulin-like 1##AK307410|CGNL1|84952|cingulin-like 1##NM_001252335|CGNL1|84952|cingulin-like 1##NM_032866|CGNL1|84952|cingulin-like 1##AY274808|CGNL1|84952|cingulin-like 1##BC030995|CGNL1|84952|cingulin-like 1##AY610514|CGNL1|84952|cingulin-like 1##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1	0.0	
chr16	2524048	2524143	reg1031766.p1	4.675	+	NM_006181 U86759	-2596	+	AK128408 TSC_hg19_v1_chr16_+_2510099 NM_025108 AK093788 AK301929 AX748307 BC018719 AK023971	-13983	+	TSC_hg19_v1_chr16_+_2479464 Z36714 AK313371 U17105 BC012349 AB208829 DQ890775	-44646	+	TSC_hg19_v1_chr16_+_2525149 BC112389 NM_001199107 NM_020705 AB032997	1036	+	TSC_hg19_v1_chr16_+_2563709 NM_001198569 M62762 NM_001694	39689	+	TSC_hg19_v1_chr16_+_2563952 BC009290	39850	+	NM_006181|NTN3|4917|netrin 3##U86759|NTN3|4917|netrin 3##AK128408|C16orf59|80178|chromosome 16 open reading frame 59##NM_025108|C16orf59|80178|chromosome 16 open reading frame 59##AK093788|C16orf59|80178|chromosome 16 open reading frame 59##AK301929|C16orf59|80178|chromosome 16 open reading frame 59##BC018719|C16orf59|80178|chromosome 16 open reading frame 59##AK023971|C16orf59|80178|chromosome 16 open reading frame 59##Z36714|CCNF|899|cyclin F##AK313371|CCNF|899|cyclin F##U17105|CCNF|899|cyclin F##BC012349|CCNF|899|cyclin F##AB208829|CCNF|899|cyclin F##DQ890775|CCNF|899|cyclin F##BC112389|TBC1D24|57465|TBC1 domain family, member 24##NM_001199107|TBC1D24|57465|TBC1 domain family, member 24##NM_020705|TBC1D24|57465|TBC1 domain family, member 24##AB032997|TBC1D24|57465|TBC1 domain family, member 24##NM_001198569|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##M62762|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##NM_001694|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##BC009290|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	0.0	
chr1	92757060	92757179	reg1027793.p2	4.675	+	NM_001012425 BC130499 BC171742	-73544	+	NM_015237	-124511	+	AY346333 NM_183242 BC013922	-211243	+	TSC_hg19_v1_chr1_-_92764545 AJ302735 AJ347709 BC001257 AK295971 U73704 NM_053274	7414	-	BC039014 NM_024813 TSC_hg19_v1_chr1_+_92764615 AK023212 BC031070 AK225054 CU691638	7456	+	AB463058 DQ891273 DQ894461 AB209606 BC074866 BC074867 TSC_hg19_v1_chr1_-_92949213	192010	-	NM_001012425|C1orf146|388649|chromosome 1 open reading frame 146##BC130499|C1orf146|388649|chromosome 1 open reading frame 146##BC171742|C1orf146|388649|chromosome 1 open reading frame 146##NM_015237|KIAA1107|23285|KIAA1107##AY346333|BTBD8|284697|BTB (POZ) domain containing 8##NM_183242|BTBD8|284697|BTB (POZ) domain containing 8##BC013922|BTBD8|284697|BTB (POZ) domain containing 8##AJ302735|GLMN|11146|glomulin, FKBP associated protein##AJ347709|GLMN|11146|glomulin, FKBP associated protein##BC001257|GLMN|11146|glomulin, FKBP associated protein##AK295971|GLMN|11146|glomulin, FKBP associated protein##U73704|GLMN|11146|glomulin, FKBP associated protein##NM_053274|GLMN|11146|glomulin, FKBP associated protein##BC039014|RPAP2|79871|RNA polymerase II associated protein 2##NM_024813|RPAP2|79871|RNA polymerase II associated protein 2##AK023212|RPAP2|79871|RNA polymerase II associated protein 2##BC031070|RPAP2|79871|RNA polymerase II associated protein 2##AK225054|RPAP2|79871|RNA polymerase II associated protein 2##DQ891273|GFI1|2672|growth factor independent 1 transcription repressor##DQ894461|GFI1|2672|growth factor independent 1 transcription repressor##AB209606|GFI1|2672|growth factor independent 1 transcription repressor##BC074866|GFI1|2672|growth factor independent 1 transcription repressor##BC074867|GFI1|2672|growth factor independent 1 transcription repressor	0.297481	CTCF.p2:14:0.297
chr19	45667950	45668130	reg1028798.p2	4.675	+	NM_198478	-4633	-	TSC_hg19_v1_chr19_+_45596436 NM_019121	-71618	+	TSC_hg19_v1_chr19_+_45596205 BC035704	-71825	+	TSC_hg19_v1_chr19_-_45681496 FJ418644 BC001907 NM_024108 BC004450 AF161407	13438	-	NM_212550 AK296695 TSC_hg19_v1_chr19_+_45682022	13973	+	AK225791 AK093466 AX748143 NM_138568	69427	-	NM_198478|NKPD1|284353|NTPase, KAP family P-loop domain containing 1##NM_019121|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##BC035704|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##FJ418644|TRAPPC6A|79090|trafficking protein particle complex 6A##BC001907|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_024108|TRAPPC6A|79090|trafficking protein particle complex 6A##BC004450|TRAPPC6A|79090|trafficking protein particle complex 6A##AF161407|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_212550|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3##AK296695|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3##AK225791|EXOC3L2|90332|exocyst complex component 3-like 2##AK093466|EXOC3L2|90332|exocyst complex component 3-like 2##NM_138568|EXOC3L2|90332|exocyst complex component 3-like 2	0.459838	CTCF.p2:71:0.340
chr2	220862085	220862214	reg1027382.p1	4.675	+	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-369795	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-399560	+	M13981 NM_002191 BC039076 BC006391 TSC_hg19_v1_chr2_+_220437031 BT006954 CU675381 DQ890602 DQ893773 M13144	-425103	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	1574861	-	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	2296871	-	AK057009 NM_153038 BC109388	2300763	+	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##M13981|INHA|3623|inhibin, alpha##NM_002191|INHA|3623|inhibin, alpha##BC039076|INHA|3623|inhibin, alpha##BC006391|INHA|3623|inhibin, alpha##BT006954|INHA|3623|inhibin, alpha##DQ890602|INHA|3623|inhibin, alpha##DQ893773|INHA|3623|inhibin, alpha##M13144|INHA|3623|inhibin, alpha##BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140	0.929932	CTCF.p2:0:0.930
chr12	57987120	57987196	reg1037042.p2	4.674	+	TSC_hg19_v1_chr12_+_57985004 AX754970 AK302254 AK125526 BC028596 AK315588 AX754972 DQ894682 EU176290	-2125	+	TSC_hg19_v1_chr12_+_57984991 NM_001146258 NM_001146259 NM_001146260 NM_024779 AK297243 AK075553	-2206	+	BC146670 BC150208 TSC_hg19_v1_chr12_+_57943844 NM_004984 U06698 AB210045 AB384390	-43211	+	TSC_hg19_v1_chr12_+_57998614 AK092085 AX747349 NM_178502 AK128752 AK094385	11451	+	AB370196 NM_001111270 AK057416	16873	+	AF487514 BC047559 NM_182947	18059	+	AX754970|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##AK302254|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##AK125526|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##BC028596|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##AK315588|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##DQ894682|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##EU176290|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##NM_001146258|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##NM_001146259|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##NM_001146260|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##NM_024779|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##AK297243|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##AK075553|PIP4K2C|79837|phosphatidylinositol-5-phosphate 4-kinase, type II, gamma##BC146670|KIF5A|3798|kinesin family member 5A##BC150208|KIF5A|3798|kinesin family member 5A##NM_004984|KIF5A|3798|kinesin family member 5A##U06698|KIF5A|3798|kinesin family member 5A##AB210045|KIF5A|3798|kinesin family member 5A##AK092085|DTX3|196403|deltex homolog 3 (Drosophila)##NM_178502|DTX3|196403|deltex homolog 3 (Drosophila)##AK128752|DTX3|196403|deltex homolog 3 (Drosophila)##AK094385|DTX3|196403|deltex homolog 3 (Drosophila)##AB370196|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25##NM_001111270|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25##AF487514|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25##BC047559|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25##NM_182947|ARHGEF25|115557|Rho guanine nucleotide exchange factor (GEF) 25	0.0	
chr13	27546416	27546549	reg1035375.p1	4.674	+	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	-211629	-	TSC_hg19_v1_chr13_+_27131892 AF454702	-414580	+	TSC_hg19_v1_chr13_+_27131854 AK289845 BC050283 NM_006646	-414648	+	DQ894074 AF022789 TSC_hg19_v1_chr13_-_27745948 AK289685	199379	-	TSC_hg19_v1_chr13_-_27746003 BC026072 NM_182488	199604	-	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	279260	+	AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12##AF454702|WASF3|10810|WAS protein family, member 3##AK289845|WASF3|10810|WAS protein family, member 3##BC050283|WASF3|10810|WAS protein family, member 3##NM_006646|WASF3|10810|WAS protein family, member 3##DQ894074|USP12|219333|ubiquitin specific peptidase 12##AF022789|USP12|219333|ubiquitin specific peptidase 12##AK289685|USP12|219333|ubiquitin specific peptidase 12##BC026072|USP12|219333|ubiquitin specific peptidase 12##NM_182488|USP12|219333|ubiquitin specific peptidase 12##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21	0.014936	
chr19	42633575	42633713	reg1025911.p1	4.674	+	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	-53278	+	TSC_hg19_v1_chr19_+_42580286 NM_022752	-53362	+	S40369 AJ249209 BC131717 NM_002088	-63706	-	M36718 X13809 BT007438 AB590941 TSC_hg19_v1_chr19_-_42636564 BC006101 M36653 NM_001207025 NM_001207026 NM_001247994 NM_002698 X53468	2947	-	TSC_hg19_v1_chr19_-_42721830 BC027930 NM_133328 AY125488 BC013372 AK307895 AK130203 AK075328	88195	-	TSC_hg19_v1_chr19_+_42724463 AK298895 AB075831 NM_133444	90820	+	AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574##NM_022752|ZNF574|64763|zinc finger protein 574##S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##M36718|POU2F2|5452|POU class 2 homeobox 2##X13809|POU2F2|5452|POU class 2 homeobox 2##BT007438|POU2F2|5452|POU class 2 homeobox 2##BC006101|POU2F2|5452|POU class 2 homeobox 2##M36653|POU2F2|5452|POU class 2 homeobox 2##NM_001207025|POU2F2|5452|POU class 2 homeobox 2##NM_001207026|POU2F2|5452|POU class 2 homeobox 2##NM_001247994|POU2F2|5452|POU class 2 homeobox 2##NM_002698|POU2F2|5452|POU class 2 homeobox 2##X53468|POU2F2|5452|POU class 2 homeobox 2##BC027930|DEDD2|162989|death effector domain containing 2##NM_133328|DEDD2|162989|death effector domain containing 2##AY125488|DEDD2|162989|death effector domain containing 2##BC013372|DEDD2|162989|death effector domain containing 2##AK307895|DEDD2|162989|death effector domain containing 2##AK130203|DEDD2|162989|death effector domain containing 2##AK075328|DEDD2|162989|death effector domain containing 2##AK298895|ZNF526|116115|zinc finger protein 526##AB075831|ZNF526|116115|zinc finger protein 526##NM_133444|ZNF526|116115|zinc finger protein 526	0.0	
chr2	138668451	138668550	reg1003823.p2	4.674	+	NM_001080427	-920039	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-1145384	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-1792824	-	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	53434	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	590893	+	TSC_hg19_v1_chr2_+_139259500 AK021919	590990	+	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like	0.0	
chr9	4464882	4465016	reg1026886.p1	4.674	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-164918	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-164986	-	TSC_hg19_v1_chr9_-_4299574 DQ438882 DQ438887 DQ438892 DQ438899 DQ438902	-165366	-	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	25488	+	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	197362	+	AK295831 NM_001039395	201720	-	AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##DQ438882|GLIS3|169792|GLIS family zinc finger 3##DQ438887|GLIS3|169792|GLIS family zinc finger 3##DQ438892|GLIS3|169792|GLIS family zinc finger 3##DQ438899|GLIS3|169792|GLIS family zinc finger 3##DQ438902|GLIS3|169792|GLIS family zinc finger 3##NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68	0.0	
chrX	40996961	40997088	reg1034158.p1	4.674	+	TSC_hg19_v1_chrX_+_40944880 NM_001039590 NM_001039591	-52152	+	TSC_hg19_v1_chrX_-_40595139 AK308871	-401895	-	TSC_hg19_v1_chrX_-_40594999 AK293070	-402044	-	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	195626	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	196433	+	AK304661 TSC_hg19_v1_chrX_+_41193866 AK127902	196841	+	NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked##NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked##AK308871|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304661|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK127902|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	0.060403	
chr11	68979563	68979662	reg1027556.p1	4.673	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-122086	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-163186	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-163262	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	82010	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	476244	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	476298	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.520166	CTCF.p2:30:0.520
chr14	71865897	71866014	reg1027932.p2	4.673	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-491504	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-491822	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-590146	-	AF090989 AF090990 NM_015556	130086	+	AK294895 NM_001204423	532861	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	533198	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.0	
chr5	41524403	41524522	reg1027097.p2	4.673	+	AB464014 TSC_hg19_v1_chr5_-_41510701 AK127142 BX648329 NM_001005473	-13784	-	BC035723 NM_001115131	-262923	-	J05024 J04506 AK292509 TSC_hg19_v1_chr5_-_41213635 J05064 AK313673 NM_000065	-310873	-	AB528366 CR457049 CU679223 DQ891805 DQ894989 TSC_hg19_v1_chr5_-_41870488 AK312327	346012	-	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	346121	-	TSC_hg19_v1_chr5_-_41870706 NM_000436	346284	-	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BC035723|C6|729|complement component 6##NM_001115131|C6|729|complement component 6##J05024|C6|729|complement component 6##J04506|C6|729|complement component 6##AK292509|C6|729|complement component 6##J05064|C6|729|complement component 6##AK313673|C6|729|complement component 6##NM_000065|C6|729|complement component 6##CR457049|OXCT1|5019|3-oxoacid CoA transferase 1##DQ891805|OXCT1|5019|3-oxoacid CoA transferase 1##DQ894989|OXCT1|5019|3-oxoacid CoA transferase 1##AK312327|OXCT1|5019|3-oxoacid CoA transferase 1##BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1	0.989475	CTCF.p2:6:0.989
chr7	6066212	6066352	reg1027122.p1	4.673	+	BC002853 BC010156 TSC_hg19_v1_chr7_+_6048927 AB590717 CU678244 CU680644	-17325	+	TSC_hg19_v1_chr7_+_6048905 BC013630	-17375	+	TSC_hg19_v1_chr7_+_6048883 AK313037 NM_006303 U24169	-17410	+	TSC_hg19_v1_chr7_-_6098780 AM392648 AM393276 CU675439 AF100784 AF183414 AL136563 AL834494 AF181071 AB037790 AF147094 AK075192 BC006524 AK290327 AK295712	32451	-	TSC_hg19_v1_chr7_-_6098807 AF255050	32523	-	TSC_hg19_v1_chr7_-_6098822 NM_001134335 NM_014413	32565	-	BC002853|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2##BC010156|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2##BC013630|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2##AK313037|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2##NM_006303|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2##U24169|AIMP2|7965|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2##AM392648|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AM393276|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AF100784|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AF183414|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AL136563|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AL834494|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AB037790|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AF147094|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AK075192|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##BC006524|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AK290327|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AK295712|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AF255050|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##NM_001134335|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##NM_014413|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1	0.0	
chr8	141474401	141474545	reg1027709.p1	4.673	+	AK128755 NM_031466	-5796	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	-6615	-	AB067469 TSC_hg19_v1_chr8_-_141467841	-6648	-	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	46919	+	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	47090	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	171151	-	AK128755|TRAPPC9|83696|trafficking protein particle complex 9##NM_031466|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2	0.0	
chr11	36531827	36531960	reg1030626.p2	4.672	+	TSC_hg19_v1_chr11_-_36531820 U78798 BC031052 AK292978 NM_004620 NM_145803	-79	-	NM_001160169	-109347	+	NM_001160168 NM_024841 BX640959 AK024275	-134333	+	NM_000448 M29474	57675	+	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	84211	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	87909	-	U78798|TRAF6|7189|TNF receptor-associated factor 6##BC031052|TRAF6|7189|TNF receptor-associated factor 6##AK292978|TRAF6|7189|TNF receptor-associated factor 6##NM_004620|TRAF6|7189|TNF receptor-associated factor 6##NM_145803|TRAF6|7189|TNF receptor-associated factor 6##NM_001160169|PRR5L|79899|proline rich 5 like##NM_001160168|PRR5L|79899|proline rich 5 like##NM_024841|PRR5L|79899|proline rich 5 like##BX640959|PRR5L|79899|proline rich 5 like##AK024275|PRR5L|79899|proline rich 5 like##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2	0.996722	CTCF.p2:2:0.997
chr17_ctg5_hap1	241	390	reg1034797.p2	4.672	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr19	2598052	2598232	reg1022320.p2	4.672	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-121904	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-141182	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-141206	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	104553	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	104600	-	AK124445 TSC_hg19_v1_chr19_-_2717420	119207	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr3	195913844	195913949	reg1025982.p2	4.672	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-104880	-	TSC_hg19_v1_chr3_-_195808984 M11507	-104913	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-104935	-	BC034801 BC022078 NM_001039617 AK122907	24385	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	29498	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	100639	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr6	70506886	70507000	reg1029164.p1	4.672	+	AF113224 TSC_hg19_v1_chr6_-_70506799 BC010360 AK225537 AK002102 AK225187	-156	-	TSC_hg19_v1_chr6_-_70506524 AK290069	-415	-	TSC_hg19_v1_chr6_-_70506472 AB074281	-466	-	TSC_hg19_v1_chr6_-_70506885 BC047073 NM_018368	2	-	D38163 NM_001858 AK310621 BC070177 BC113362 BC113364	69520	+	AK309023 TSC_hg19_v1_chr6_+_70577418	70419	+	AF113224|LMBRD1|55788|LMBR1 domain containing 1##BC010360|LMBRD1|55788|LMBR1 domain containing 1##AK225537|LMBRD1|55788|LMBR1 domain containing 1##AK002102|LMBRD1|55788|LMBR1 domain containing 1##AK225187|LMBRD1|55788|LMBR1 domain containing 1##AK290069|LMBRD1|55788|LMBR1 domain containing 1##AB074281|LMBRD1|55788|LMBR1 domain containing 1##BC047073|LMBRD1|55788|LMBR1 domain containing 1##NM_018368|LMBRD1|55788|LMBR1 domain containing 1##D38163|COL19A1|1310|collagen, type XIX, alpha 1##NM_001858|COL19A1|1310|collagen, type XIX, alpha 1##AK310621|COL19A1|1310|collagen, type XIX, alpha 1##BC070177|COL19A1|1310|collagen, type XIX, alpha 1##BC113362|COL19A1|1310|collagen, type XIX, alpha 1##BC113364|COL19A1|1310|collagen, type XIX, alpha 1	0.607057	CTCF.p2:-6:0.607
chr8	130548325	130548474	reg1005966.p2	4.672	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1741616	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1799909	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1800074	+	AB042405 NM_031415	250734	-	BC003599 TSC_hg19_v1_chr8_-_130951934	403516	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	403607	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr10	74055898	74056078	reg1026017.p2	4.671	+	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-22164	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-79877	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-80200	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	58690	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	58938	-	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	227731	-	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1	0.0	
chr11	115860448	115860543	reg1005030.p1	4.671	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-485315	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-771847	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1311247	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	783203	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	798220	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	798243	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.0	
chr20	62643125	62643305	reg1022807.p2	4.671	+	TSC_hg19_v1_chr20_+_62612576 AB527848	-30629	+	AF221842 TSC_hg19_v1_chr20_+_62612506 AF026031 AK314310 AB019219 BC001666	-30684	+	TSC_hg19_v1_chr20_+_62612487 AK225993 AK001554	-30738	+	AJ243896 AF270652 BC111390 NM_018419 BC035513 BC038590 BC073971 TSC_hg19_v1_chr20_-_62680993 AB033888	37723	-	NM_198723	45223	+	NM_003195	50794	+	AF221842|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF026031|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK314310|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AB019219|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##BC001666|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK225993|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK001554|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AJ243896|SOX18|54345|SRY (sex determining region Y)-box 18##AF270652|SOX18|54345|SRY (sex determining region Y)-box 18##BC111390|SOX18|54345|SRY (sex determining region Y)-box 18##NM_018419|SOX18|54345|SRY (sex determining region Y)-box 18##BC035513|SOX18|54345|SRY (sex determining region Y)-box 18##BC038590|SOX18|54345|SRY (sex determining region Y)-box 18##BC073971|SOX18|54345|SRY (sex determining region Y)-box 18##AB033888|SOX18|54345|SRY (sex determining region Y)-box 18##NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2	0.0	
chr2	54433853	54433949	reg1027942.p1	4.671	+	NM_138448 AK307096 BC012290 X84195 TSC_hg19_v1_chr2_+_54342769	-91307	+	TSC_hg19_v1_chr2_-_54198154 AB621805	-235769	-	D38521 TSC_hg19_v1_chr2_-_54197945 AY894756 AY894754 AY894755 NM_014614	-236020	-	BC068576 AK097417 NM_001003937	49474	-	AK097617 NM_001100396 BC126244 BC126246 BC144191 BC144192 BC031669	124187	+	TSC_hg19_v1_chr2_+_54683463 NM_003128 AB371586 AB209748	249711	+	NM_138448|ACYP2|98|acylphosphatase 2, muscle type##AK307096|ACYP2|98|acylphosphatase 2, muscle type##BC012290|ACYP2|98|acylphosphatase 2, muscle type##X84195|ACYP2|98|acylphosphatase 2, muscle type##D38521|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894756|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894754|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894755|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##NM_014614|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##BC068576|TSPYL6|388951|TSPY-like 6##AK097417|TSPYL6|388951|TSPY-like 6##NM_001003937|TSPYL6|388951|TSPY-like 6##AK097617|C2orf73|129852|chromosome 2 open reading frame 73##NM_001100396|C2orf73|129852|chromosome 2 open reading frame 73##BC126244|C2orf73|129852|chromosome 2 open reading frame 73##BC126246|C2orf73|129852|chromosome 2 open reading frame 73##BC144191|C2orf73|129852|chromosome 2 open reading frame 73##BC144192|C2orf73|129852|chromosome 2 open reading frame 73##BC031669|C2orf73|129852|chromosome 2 open reading frame 73##NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	0.509266	CTCF.p2:-7:0.509
chr5	59790560	59790729	reg1028072.p1	4.671	+	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	-6604	+	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	-6740	-	NM_001104631	-601024	-	TSC_hg19_v1_chr5_-_59995928 AF490257	205272	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	205321	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	349427	-	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF490257|DEPDC1B|55789|DEP domain containing 1B##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7	0.0	
chr7	100240010	100240119	reg1031202.p1	4.671	+	BC150192 AF067864 BC142630 NM_003227	-910	-	AF085928 NM_001206855	-8861	-	TSC_hg19_v1_chr7_-_100230676 AK000421	-9363	-	TSC_hg19_v1_chr7_-_100240337 AK022002	303	-	AB527576 CU676776 TSC_hg19_v1_chr7_-_100254028	13938	-	AB015906 AF041475 BC008582 BC020944 TSC_hg19_v1_chr7_-_100254072 AK314940 NM_016188	14001	-	BC150192|TFR2|7036|transferrin receptor 2##AF067864|TFR2|7036|transferrin receptor 2##BC142630|TFR2|7036|transferrin receptor 2##NM_003227|TFR2|7036|transferrin receptor 2##AF085928|TFR2|7036|transferrin receptor 2##NM_001206855|TFR2|7036|transferrin receptor 2##AK000421|TFR2|7036|transferrin receptor 2##AK022002|TFR2|7036|transferrin receptor 2##AB015906|ACTL6B|51412|actin-like 6B##AF041475|ACTL6B|51412|actin-like 6B##BC008582|ACTL6B|51412|actin-like 6B##BC020944|ACTL6B|51412|actin-like 6B##AK314940|ACTL6B|51412|actin-like 6B##NM_016188|ACTL6B|51412|actin-like 6B	0.0	
chr1	196278643	196278774	reg1032857.p1	4.670	+	AF288390 BC022507 NM_003783	-3122976	-	TSC_hg19_v1_chr1_+_193091308 BC007325 AF312865 AK314772 AB590625 CU688012 EU831787 EU831865 BC011808	-3187352	+	TSC_hg19_v1_chr1_+_193091242 AK300929 BC065037	-3187469	+	EU251076 BC103947 BC103948 BC103949 BC103950 AY359444 NM_198503 BX647852 AK309729 TSC_hg19_v1_chr1_-_196577612	298817	-	TSC_hg19_v1_chr1_-_196577676 AK131498	298974	-	NM_000186 NM_001014975 TSC_hg19_v1_chr1_+_196621172 AK291395 AK225649 X07523 Y00716 BC037285 BC012610 BC110643 BC073982 BC142699 CU691466	342419	+	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC007325|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF312865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK314772|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831787|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK300929|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC065037|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU251076|KCNT2|343450|potassium channel, subfamily T, member 2##BC103947|KCNT2|343450|potassium channel, subfamily T, member 2##BC103948|KCNT2|343450|potassium channel, subfamily T, member 2##BC103949|KCNT2|343450|potassium channel, subfamily T, member 2##BC103950|KCNT2|343450|potassium channel, subfamily T, member 2##AY359444|KCNT2|343450|potassium channel, subfamily T, member 2##NM_198503|KCNT2|343450|potassium channel, subfamily T, member 2##BX647852|KCNT2|343450|potassium channel, subfamily T, member 2##AK309729|KCNT2|343450|potassium channel, subfamily T, member 2##AK131498|KCNT2|343450|potassium channel, subfamily T, member 2##NM_000186|CFH|3075|complement factor H##NM_001014975|CFH|3075|complement factor H##AK291395|CFH|3075|complement factor H##AK225649|CFH|3075|complement factor H##X07523|CFH|3075|complement factor H##Y00716|CFH|3075|complement factor H##BC037285|CFH|3075|complement factor H##BC012610|CFH|3075|complement factor H##BC110643|CFH|3075|complement factor H##BC073982|CFH|3075|complement factor H##BC142699|CFH|3075|complement factor H	0.866169	CTCF.p2:13:0.866
chr20	328982	329162	reg1030521.p2	4.670	+	TSC_hg19_v1_chr20_+_327754 AK026982	-1323	+	TSC_hg19_v1_chr20_+_327371 NM_024958 AK290527	-1667	+	TSC_hg19_v1_chr20_+_306226 BC067361 NM_006943 U35612 BC028103	-22836	+	AY247738 NM_021158 TSC_hg19_v1_chr20_+_361483 AJ697936 AK026945 AK222837 BC027484	32341	+	TSC_hg19_v1_chr20_+_361708 BC019363	32636	+	AJ697940 TSC_hg19_v1_chr20_+_361938 AK297546 AJ697937 AJ697938 AJ697939	32890	+	AK026982|NRSN2|80023|neurensin 2##NM_024958|NRSN2|80023|neurensin 2##AK290527|NRSN2|80023|neurensin 2##BC067361|SOX12|6666|SRY (sex determining region Y)-box 12##NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12##U35612|SOX12|6666|SRY (sex determining region Y)-box 12##BC028103|SOX12|6666|SRY (sex determining region Y)-box 12##AY247738|TRIB3|57761|tribbles homolog 3 (Drosophila)##NM_021158|TRIB3|57761|tribbles homolog 3 (Drosophila)##AJ697936|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK026945|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK222837|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC027484|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC019363|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK297546|TRIB3|57761|tribbles homolog 3 (Drosophila)	0.0	
chr2	202022906	202023086	reg1009827.p1	4.670	+	AF041459 NM_001202515	-17999	+	NM_001202518 AK304585 AF041462	-25274	+	TSC_hg19_v1_chr2_+_201983419 AK289913 AK315208	-39524	+	NM_001206524 NM_001206542 NM_001230 NM_032974 NM_032976 NM_032977	24624	+	TSC_hg19_v1_chr2_+_202047863 AK310746 U86214 AK304859 AK225475 AY690601 BC042844 U60519 AJ487678 AJ487679	24864	+	NM_001080124 NM_001228 NM_033355 NM_033358 AF422927 AF422928 BC010390 AK310630 BC017031 U60520 X98176	75229	+	AF041459|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202515|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202518|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK304585|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF041462|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK289913|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK315208|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001080124|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001228|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033355|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033358|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422927|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422928|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC010390|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310630|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC017031|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##U60520|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98176|CASP8|841|caspase 8, apoptosis-related cysteine peptidase	0.053992	
chr6	50783264	50783438	reg1013888.p1	4.670	+	AY028376 NM_172238	-102095	+	DQ012016 NM_001037498	-766988	-	DQ012014 DQ012015 NM_001037497 NM_001037728	-793681	-	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	3184	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	1169044	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	1267855	+	AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##DQ012014|DEFB110|245913|defensin, beta 110 locus##DQ012015|DEFB110|245913|defensin, beta 110 locus##NM_001037497|DEFB110|245913|defensin, beta 110 locus##NM_001037728|DEFB110|245913|defensin, beta 110 locus##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A	0.782938	CTCF.p2:-7:0.783
chr9	44227515	44227638	reg1012480.p2	4.670	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-542733	+	NM_001145196	-596847	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-1094089	-	TSC_hg19_v1_chr9_+_45441926 BC006438	1214350	+	BC040528 NM_001113541 NM_015667	21282033	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	22229725	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.364664	CTCF.p2:-6:0.365
chr11	128339279	128339432	reg1026733.p1	4.669	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1466050	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1468630	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1468695	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	52608	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	52779	-	BX640634 NM_001143820	118097	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.0	
chr11	58344646	58344752	reg1026155.p1	4.669	+	BC007490 BC019035 TSC_hg19_v1_chr11_-_58343330 AK313306 AK223165 AK301093 AF062075 NM_004811	-1351	-	NM_001005218	-69122	-	BC136947 BC136948 NM_001004733	-137054	-	BC034230 TSC_hg19_v1_chr11_-_58345666 AK300955 NM_001143995 AK299264	962	-	TSC_hg19_v1_chr11_+_58346591 BC051743 NM_001197051 NM_053023	1884	+	TSC_hg19_v1_chr11_+_58346697 AB056107 AB057443 CU690828	1996	+	BC007490|LPXN|9404|leupaxin##BC019035|LPXN|9404|leupaxin##AK313306|LPXN|9404|leupaxin##AK223165|LPXN|9404|leupaxin##AK301093|LPXN|9404|leupaxin##AF062075|LPXN|9404|leupaxin##NM_004811|LPXN|9404|leupaxin##NM_001005218|OR5B21|219968|olfactory receptor, family 5, subfamily B, member 21##BC136947|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12##BC136948|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12##NM_001004733|OR5B12|390191|olfactory receptor, family 5, subfamily B, member 12##BC034230|LPXN|9404|leupaxin##AK300955|LPXN|9404|leupaxin##NM_001143995|LPXN|9404|leupaxin##AK299264|LPXN|9404|leupaxin##BC051743|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_001197051|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_053023|ZFP91|80829|zinc finger protein 91 homolog (mouse)##AB056107|ZFP91|80829|zinc finger protein 91 homolog (mouse)##AB057443|ZFP91-CNTF|386607|ZFP91-CNTF readthrough	0.0	
chr2	68630445	68630619	reg1025360.p1	4.669	+	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	-38075	+	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	-38160	+	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	-83432	-	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	63878	-	TSC_hg19_v1_chr2_+_68694716 AK290841 NM_173545 AK308186 BC041144 CU691972	64232	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	242421	+	DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48##AK290841|APLF|200558|aprataxin and PNKP like factor##NM_173545|APLF|200558|aprataxin and PNKP like factor##AK308186|APLF|200558|aprataxin and PNKP like factor##BC041144|APLF|200558|aprataxin and PNKP like factor##AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1	0.0	
chr6_mcf_hap5	2944602	2944685	reg1027253.p1	4.669	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.586768	CTCF.p2:9:0.587
chr7	65670247	65670366	reg1027698.p2	4.669	+	TSC_hg19_v1_chr7_+_65579866 BC040107 BX647867 U51134	-90404	+	TSC_hg19_v1_chr7_+_65579836 AK290553 AK311829 BC105808	-90471	+	NM_001040647 NM_001040648 NM_001142414 NM_014478 TSC_hg19_v1_chr7_+_65579824 AK303737	-90492	+	TSC_hg19_v1_chr7_+_65670320 NM_003596 AK307053 AK313098	3	+	TSC_hg19_v1_chr7_+_65958724 AY726579	288397	+	TSC_hg19_v1_chr7_-_66057374 BC080520 BC057835 BC067867 AK310548 BC103766 AK310370 AK296922	387055	-	BC040107|CRCP|27297|CGRP receptor component##BX647867|CRCP|27297|CGRP receptor component##U51134|CRCP|27297|CGRP receptor component##AK290553|CRCP|27297|CGRP receptor component##AK311829|CRCP|27297|CGRP receptor component##BC105808|CRCP|27297|CGRP receptor component##NM_001040647|CRCP|27297|CGRP receptor component##NM_001040648|CRCP|27297|CGRP receptor component##NM_001142414|CRCP|27297|CGRP receptor component##NM_014478|CRCP|27297|CGRP receptor component##AK303737|CRCP|27297|CGRP receptor component##NM_003596|TPST1|8460|tyrosylprotein sulfotransferase 1##AK307053|TPST1|8460|tyrosylprotein sulfotransferase 1##AK313098|TPST1|8460|tyrosylprotein sulfotransferase 1##AK310548|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##BC103766|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK310370|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK296922|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene	0.0	
chr8	52373997	52374140	reg1019928.p2	4.669	+	AJ003030 NM_018967	-1549472	+	NM_001007176 BC017981 AJ276240	-2389159	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-2540158	-	EU170240 AY877349 NM_144651	347885	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	437534	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	437659	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	1.230166	CTCF.p2:-2:0.974	CTCF.p2:-77:0.257
chr12	95211860	95211929	reg1029300.p1	4.668	+	EU831778 EU831856 BC040535 NM_020698	-167630	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-358162	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-358252	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	185576	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	185622	-	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	255404	-	EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	0.0	
chr14	22336789	22336912	reg1030959.p1	4.668	+	AB463964 NM_001001912 AY726598	-203528	+	NM_001005466 AB529274 BC137371 BC137382	-233804	-	AB528817 NM_001005465	-297976	-	X58763 TSC_hg19_v1_chr14_+_22989364	652499	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	721236	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	721284	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.999664	CTCF.p2:-30:1.000
chr18	46394826	46395006	reg1027587.p1	4.668	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-329143	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-459207	-	AM988836 AK296709 NM_001039360 EF120357	-731217	-	AK131394 NM_001190823	74231	-	AK301535 NM_001190822	80786	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	81851	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.0	
chr8	139491073	139491189	reg1037295.p1	4.668	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-3020930	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-3021473	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-3765857	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	17975	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	435113	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	1224151	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.072736	
chr12	108130903	108131018	reg1025349.p2	4.667	+	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	-51293	+	AK127295 NM_001017523	-156327	+	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	-418747	+	AK056378 TSC_hg19_v1_chr12_-_108154899	23879	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	23950	-	TSC_hg19_v1_chr12_-_108154938 BC068562	24041	-	AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##AK056378|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4##BC068562|PRDM4|11108|PR domain containing 4	0.014254	
chr14	102983144	102983224	reg1010185.p1	4.667	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-7070	-	AK291868 TSC_hg19_v1_chr14_-_102976070	-7151	-	TSC_hg19_v1_chr14_+_102829428 BC030791 AK296395 AK299690 BC142667 BC142715 AK127721	-153759	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	75814	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	75977	+	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	260635	+	BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##AK291868|ANKRD9|122416|ankyrin repeat domain 9##BC030791|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK296395|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK299690|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142667|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142715|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK127721|TECPR2|9895|tectonin beta-propeller repeat containing 2##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##AF155595|RCOR1|23186|REST corepressor 1##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3	0.0	
chr5	58792726	58792852	reg1033237.p1	4.667	+	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	-140046	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	-220859	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	-457411	-	U50159 NM_006203 L20970	89510	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	271559	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	271666	-	AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.892611	CTCF.p2:9:0.893
chr11	46918688	46918794	reg1030170.p2	4.666	+	TSC_hg19_v1_chr11_-_46867841 NM_001008938 NM_014756	-50888	-	TSC_hg19_v1_chr11_-_46867830 BC111043 AK092678 AX747668 BC017856 BC070136	-50929	-	TSC_hg19_v1_chr11_+_46740780 BC051332 AK222775 AK222777 AK293326 EU832664 EU832742 AB591029 V00595	-177955	+	TSC_hg19_v1_chr11_-_46940102 AB384531 AB231861 BC136667 BC136668 AB084910 NM_002334 BC110808	21321	-	TSC_hg19_v1_chr11_+_46958328 AK316318 NM_001003676 NM_001003677 NM_001003678 NM_024113 AK315639 BC001860 BC009455 AL136575 BC052291 BC013988 AK300813 AK025863 AK293609 AB528079 AM393584 AM393807 CR457351 CU679361 CU680726	39551	+	AK301785 AL834337 EU832352 EU832437 AK300347 BC036823 AK027482 TSC_hg19_v1_chr11_-_47198413 AK304541 BC030148	279658	-	NM_001008938|CKAP5|9793|cytoskeleton associated protein 5##NM_014756|CKAP5|9793|cytoskeleton associated protein 5##BC111043|CKAP5|9793|cytoskeleton associated protein 5##BC017856|CKAP5|9793|cytoskeleton associated protein 5##BC070136|CKAP5|9793|cytoskeleton associated protein 5##BC051332|F2|2147|coagulation factor II (thrombin)##AK222775|F2|2147|coagulation factor II (thrombin)##AK222777|F2|2147|coagulation factor II (thrombin)##AK293326|F2|2147|coagulation factor II (thrombin)##EU832664|F2|2147|coagulation factor II (thrombin)##EU832742|F2|2147|coagulation factor II (thrombin)##V00595|F2|2147|coagulation factor II (thrombin)##AB231861|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136667|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136668|LRP4|4038|low density lipoprotein receptor-related protein 4##AB084910|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_002334|LRP4|4038|low density lipoprotein receptor-related protein 4##AK316318|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003676|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003677|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003678|C11orf49|79096|chromosome 11 open reading frame 49##NM_024113|C11orf49|79096|chromosome 11 open reading frame 49##AK315639|C11orf49|79096|chromosome 11 open reading frame 49##BC001860|C11orf49|79096|chromosome 11 open reading frame 49##BC009455|C11orf49|79096|chromosome 11 open reading frame 49##AL136575|C11orf49|79096|chromosome 11 open reading frame 49##BC052291|C11orf49|79096|chromosome 11 open reading frame 49##BC013988|C11orf49|79096|chromosome 11 open reading frame 49##AK300813|C11orf49|79096|chromosome 11 open reading frame 49##AK025863|C11orf49|79096|chromosome 11 open reading frame 49##AK293609|C11orf49|79096|chromosome 11 open reading frame 49##AM393584|C11orf49|79096|chromosome 11 open reading frame 49##AM393807|C11orf49|79096|chromosome 11 open reading frame 49##CR457351|C11orf49|79096|chromosome 11 open reading frame 49##AK301785|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AL834337|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832352|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832437|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300347|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC036823|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK027482|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK304541|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC030148|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2	0.999698	CTCF.p2:-9:1.000
chr18	61517347	61517450	reg1027069.p1	4.666	+	NM_003784 AF027866 AK300828 BC069417 BC069442 BC069547 AK290876 BC106743 BC106744	-74719	+	NM_001040147 D88575	-97107	+	AK292775 AK296705 AK309537 AK309970 NM_080475	-147205	+	AK313159 BC012609 NM_001143818 NM_002575 Y00630 J02685 J03603 M18082	37565	+	TSC_hg19_v1_chr18_+_61575223 AK314936	57816	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	65346	+	NM_003784|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AF027866|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK300828|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069417|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069442|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069547|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK290876|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106743|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106744|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##NM_001040147|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##D88575|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK313159|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##BC012609|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_001143818|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_002575|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##Y00630|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J02685|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J03603|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##M18082|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##AK314936|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10	0.987681	CTCF.p2:13:0.988
chr22	18374662	18374770	reg1031823.p1	4.666	+	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-117382	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-117493	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	-117509	-	TSC_hg19_v1_chr22_-_18484268 AK127487	109512	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	132545	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	185972	+	BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26	0.785828	CTCF.p2:-1:0.786
chr5	83747010	83747102	reg1027178.p1	4.666	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-66392	-	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	-66810	-	AK313713 NM_001884 X17405 X78076 X78075	-730122	-	TSC_hg19_v1_chr5_+_85913757 AK026505	2166702	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	2166761	+	TSC_hg19_v1_chr5_+_86563706 CR749722	2816629	+	BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.017209	
chr7	143187945	143188036	reg1030016.p2	4.666	+	BC101157 BC101158 NM_176883	-13025	+	AB529260 BC100938 BC100939 BC100940 BC100941 NM_177437	-47445	+	EU826604 EU826605 TSC_hg19_v1_chr7_-_143105950 AK290351 AK313263 BC130291 BC144156 M18391 NM_005232	-82050	-	BC043153 BC110410 NM_001008747 BC146818 BC150314	80901	+	BC041464 AK315909 NM_001130025 AK098041 AK297123 AL832734 BC033189	130072	+	BC113530 BC117233 NM_173678 AY167570 BC010225	130552	+	BC101157|TAS2R41|259287|taste receptor, type 2, member 41##BC101158|TAS2R41|259287|taste receptor, type 2, member 41##NM_176883|TAS2R41|259287|taste receptor, type 2, member 41##BC100938|TAS2R60|338398|taste receptor, type 2, member 60##BC100939|TAS2R60|338398|taste receptor, type 2, member 60##BC100940|TAS2R60|338398|taste receptor, type 2, member 60##BC100941|TAS2R60|338398|taste receptor, type 2, member 60##NM_177437|TAS2R60|338398|taste receptor, type 2, member 60##EU826604|EPHA1|2041|EPH receptor A1##EU826605|EPHA1|2041|EPH receptor A1##AK290351|EPHA1|2041|EPH receptor A1##AK313263|EPHA1|2041|EPH receptor A1##BC130291|EPHA1|2041|EPH receptor A1##BC144156|EPHA1|2041|EPH receptor A1##M18391|EPHA1|2041|EPH receptor A1##NM_005232|EPHA1|2041|EPH receptor A1##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_001008747|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC146818|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC150314|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC041464|LOC154761|154761|uncharacterized LOC154761##NM_001130025|FAM115C|285966|family with sequence similarity 115, member C##AK098041|FAM115C|285966|family with sequence similarity 115, member C##AK297123|LOC154761|154761|uncharacterized LOC154761##AL832734|FAM115C|285966|family with sequence similarity 115, member C##BC033189|LOC154761|154761|uncharacterized LOC154761##BC113530|FAM115C|285966|family with sequence similarity 115, member C##BC117233|FAM115C|285966|family with sequence similarity 115, member C##NM_173678|FAM115C|285966|family with sequence similarity 115, member C##AY167570|FAM115C|285966|family with sequence similarity 115, member C##BC010225|LOC154761|154761|uncharacterized LOC154761	0.977947	CTCF.p2:2:0.978
chr11	2913584	2913681	reg1007876.p2	4.665	+	U22398 BC039188 NM_000076 NM_001122630 NM_001122631 TSC_hg19_v1_chr11_-_2907004 BC067842	-6638	-	AK123073 TSC_hg19_v1_chr11_-_2721223	-192407	-	BC007733 TSC_hg19_v1_chr11_-_2560881	-352785	-	TSC_hg19_v1_chr11_+_2920918 BC015571 NM_183233	7313	+	TSC_hg19_v1_chr11_+_2923507 NM_002555	9870	+	TSC_hg19_v1_chr11_+_2923528 AB012083 AF028738 AF059663 AF070479 AF037064	9904	+	U22398|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC039188|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_000076|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122630|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122631|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC067842|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##AK123073|KCNQ1OT1|10984|KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)##BC015571|SLC22A18|5002|solute carrier family 22, member 18##NM_183233|SLC22A18|5002|solute carrier family 22, member 18##NM_002555|SLC22A18|5002|solute carrier family 22, member 18##AB012083|SLC22A18|5002|solute carrier family 22, member 18##AF028738|SLC22A18|5002|solute carrier family 22, member 18##AF059663|SLC22A18|5002|solute carrier family 22, member 18##AF070479|SLC22A18|5002|solute carrier family 22, member 18##AF037064|SLC22A18|5002|solute carrier family 22, member 18	0.091931	
chr12	111180920	111181025	reg1032107.p2	4.665	+	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	-216	-	TSC_hg19_v1_chr12_-_111180641 X74008 BC014073	-316	-	L07395 AK297882 AB590512 EU831993 EU832086 TSC_hg19_v1_chr12_-_111180593	-426	-	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	103831	+	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	177406	-	BC151245 NM_015267 AB006631 AF271236	290900	+	NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##X74008|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC014073|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##L07395|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK297882|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU831993|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU832086|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2	0.0	
chr20	1513858	1513971	reg1028521.p1	4.665	+	AK097113 TSC_hg19_v1_chr20_-_1472172 NM_001122962 NM_001134836	-41714	-	AK297072 TSC_hg19_v1_chr20_-_1472142	-41780	-	AY424277 AK095499 AK294440 TSC_hg19_v1_chr20_-_1472067	-41879	-	DQ891297 EU176577 BC033502 NM_178460	24408	-	AB590891 CU692960 BC131747 Y10376 BC025286 BC075835 TSC_hg19_v1_chr20_-_1600656 AK289866 AK313517 BX537992 NM_001083910 NM_001135844 NM_006065	86724	-	AY748247 AY748248 CU687894 BC064532 BC020629 AK292745 NM_001039508 NM_018556 NM_080816	124477	-	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2##NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2##AK297072|SIRPB2|284759|signal-regulatory protein beta 2##AY424277|SIRPB2|284759|signal-regulatory protein beta 2##AK095499|SIRPB2|284759|signal-regulatory protein beta 2##AK294440|SIRPB2|284759|signal-regulatory protein beta 2##DQ891297|SIRPD|128646|signal-regulatory protein delta##EU176577|SIRPD|128646|signal-regulatory protein delta##BC033502|SIRPD|128646|signal-regulatory protein delta##NM_178460|SIRPD|128646|signal-regulatory protein delta##BC131747|SIRPB1|10326|signal-regulatory protein beta 1##Y10376|SIRPB1|10326|signal-regulatory protein beta 1##BC025286|SIRPB1|10326|signal-regulatory protein beta 1##BC075835|SIRPB1|10326|signal-regulatory protein beta 1##AK289866|SIRPB1|10326|signal-regulatory protein beta 1##BX537992|SIRPB1|10326|signal-regulatory protein beta 1##NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1##NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1##NM_006065|SIRPB1|10326|signal-regulatory protein beta 1##AY748247|SIRPG|55423|signal-regulatory protein gamma##AY748248|SIRPG|55423|signal-regulatory protein gamma##BC064532|SIRPG|55423|signal-regulatory protein gamma##BC020629|SIRPG|55423|signal-regulatory protein gamma##AK292745|SIRPG|55423|signal-regulatory protein gamma##NM_001039508|SIRPG|55423|signal-regulatory protein gamma##NM_018556|SIRPG|55423|signal-regulatory protein gamma##NM_080816|SIRPG|55423|signal-regulatory protein gamma	0.0	
chr2	190539122	190539302	reg1029470.p1	4.665	+	NM_019048 AK000759 TSC_hg19_v1_chr2_+_190526184 BC001243	-13041	+	BC037733 TSC_hg19_v1_chr2_-_190445663	-93570	-	TSC_hg19_v1_chr2_-_190445522 DQ065759 NM_014585	-93681	-	TSC_hg19_v1_chr2_+_190539326 BC037215 AK307328 BC047413	148	+	AK126073 NM_144708	1498	+	AK314565 NM_022353 AK055441	88725	-	NM_019048|ASNSD1|54529|asparagine synthetase domain containing 1##AK000759|ASNSD1|54529|asparagine synthetase domain containing 1##BC001243|ASNSD1|54529|asparagine synthetase domain containing 1##BC037733|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##DQ065759|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##NM_014585|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##BC037215|ANKAR|150709|ankyrin and armadillo repeat containing##AK307328|ANKAR|150709|ankyrin and armadillo repeat containing##BC047413|ANKAR|150709|ankyrin and armadillo repeat containing##AK126073|ANKAR|150709|ankyrin and armadillo repeat containing##NM_144708|ANKAR|150709|ankyrin and armadillo repeat containing##AK314565|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1##NM_022353|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1##AK055441|OSGEPL1|64172|O-sialoglycoprotein endopeptidase-like 1	0.638567	CTCF.p2:-8:0.639
chr22	32268515	32268600	reg1014923.p2	4.665	+	NM_001136029 AB014545 BC146766 AJ698950 AJ698951 AJ704764 AB383936 CU691240	-117680	+	TSC_hg19_v1_chr22_+_32150004 NM_001007188 NM_001242896 NM_014662 AK300737 BC057797 BC136612 BC144291	-118509	+	TSC_hg19_v1_chr22_+_32149962 AK294987	-118594	+	TSC_hg19_v1_chr22_+_32340520 NM_003405 X78138 BC003047 S80794	71931	+	TSC_hg19_v1_chr22_+_32340608 AK312650 CR456612 AB385077 L20422 CU013208 CU013496	72098	+	AJ704765 AJ704766 AL050256 NM_015372 AK315264	72764	-	NM_001136029|DEPDC5|9681|DEP domain containing 5##AB014545|DEPDC5|9681|DEP domain containing 5##BC146766|DEPDC5|9681|DEP domain containing 5##AJ698950|DEPDC5|9681|DEP domain containing 5##AJ698951|DEPDC5|9681|DEP domain containing 5##AJ704764|DEPDC5|9681|DEP domain containing 5##NM_001007188|DEPDC5|9681|DEP domain containing 5##NM_001242896|DEPDC5|9681|DEP domain containing 5##NM_014662|DEPDC5|9681|DEP domain containing 5##AK300737|DEPDC5|9681|DEP domain containing 5##BC057797|DEPDC5|9681|DEP domain containing 5##BC136612|DEPDC5|9681|DEP domain containing 5##BC144291|DEPDC5|9681|DEP domain containing 5##AK294987|DEPDC5|9681|DEP domain containing 5##NM_003405|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##X78138|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##BC003047|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##S80794|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##AK312650|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CR456612|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##L20422|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CU013208|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##CU013496|YWHAH|7533|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide##AJ704765|C22orf24|25775|chromosome 22 open reading frame 24##AJ704766|C22orf24|25775|chromosome 22 open reading frame 24##AL050256|C22orf24|25775|chromosome 22 open reading frame 24##NM_015372|C22orf24|25775|chromosome 22 open reading frame 24##AK315264|C22orf24|25775|chromosome 22 open reading frame 24	0.303345	
chr3	11888406	11888502	reg1027660.p2	4.665	+	EU832515 EU832596 AK295839 TSC_hg19_v1_chr3_-_11888358 AK310993 BC015088 NM_138807 AK092776 AX747723 AK309733 AK303598	-195	-	TSC_hg19_v1_chr3_-_11762012 D50911 BC001514 AK130542 BC000763 BC003038 NM_014667	-126339	-	TSC_hg19_v1_chr3_-_11685397 NM_001128219	-203058	-	TSC_hg19_v1_chr3_+_12045861 NM_003178 NM_133625 AK094464 BC051307 AB209088 U40215 AF077671 AF077737	157449	+	BT019627 CU679743 DQ891795 DQ894978 U76456 TSC_hg19_v1_chr3_-_12200413 AK313018	311925	-	BC010553 NM_003256	312396	-	EU832515|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##EU832596|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK295839|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK310993|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##BC015088|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_138807|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK092776|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK309733|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK303598|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##D50911|VGLL4|9686|vestigial like 4 (Drosophila)##BC001514|VGLL4|9686|vestigial like 4 (Drosophila)##AK130542|VGLL4|9686|vestigial like 4 (Drosophila)##BC000763|VGLL4|9686|vestigial like 4 (Drosophila)##BC003038|VGLL4|9686|vestigial like 4 (Drosophila)##NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)##NM_003178|SYN2|6854|synapsin II##NM_133625|SYN2|6854|synapsin II##AK094464|SYN2|6854|synapsin II##BC051307|SYN2|6854|synapsin II##AB209088|SYN2|6854|synapsin II##U40215|SYN2|6854|synapsin II##AF077671|SYN2|6854|synapsin II##AF077737|SYN2|6854|synapsin II##BT019627|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ891795|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ894978|TIMP4|7079|TIMP metallopeptidase inhibitor 4##U76456|TIMP4|7079|TIMP metallopeptidase inhibitor 4##AK313018|TIMP4|7079|TIMP metallopeptidase inhibitor 4##BC010553|TIMP4|7079|TIMP metallopeptidase inhibitor 4##NM_003256|TIMP4|7079|TIMP metallopeptidase inhibitor 4	0.060375	
chr3	46106820	46107001	reg1024305.p1	4.665	+	AB189434 AB189435 NM_001024644 NM_005283	-37932	-	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	-69589	-	NM_006564 Y13248	-121938	+	BC064991 TSC_hg19_v1_chr3_-_46249804 L10918 BC051306 NM_001295	142899	-	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	177006	+	AK292685 NM_001123041 NM_001123396	288319	+	AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##BC064991|CCR1|1230|chemokine (C-C motif) receptor 1##L10918|CCR1|1230|chemokine (C-C motif) receptor 1##BC051306|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001295|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2	0.0	
chr7	5229611	5229756	reg1025876.p2	4.665	+	AK293069 NM_001204456 NM_001204513 TSC_hg19_v1_chr7_+_5085490 AF226869 NM_021163	-144182	+	TSC_hg19_v1_chr7_+_5013663 BC068459 AK309798 AK308526 AK311517 BX538059 AK303831 BC026736	-215997	+	AY424288 BC037881 BC048346 TSC_hg19_v1_chr7_-_4998841 AK094524 BC067905 NM_001100600 NM_198403	-230884	-	TSC_hg19_v1_chr7_+_5229863 AL080155 NM_001033518 NM_001033519 NM_015610 NM_016003 AK024279 BC007596 AK023041	146	+	TSC_hg19_v1_chr7_+_5229890 AK315468 BC004116 BC021200	214	+	TSC_hg19_v1_chr7_+_5229917 BC021012 BC021068	232	+	AK293069|RBAK|57786|RB-associated KRAB zinc finger##NM_001204456|RBAK|57786|RB-associated KRAB zinc finger##NM_001204513|RBAK-LOC389458|100533952|RBAK-LOC389458 readthrough##NM_021163|RBAK|57786|RB-associated KRAB zinc finger##BC068459|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK309798|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK308526|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK311517|RNF216P1|441191|ring finger protein 216 pseudogene 1##BX538059|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK303831|RNF216P1|441191|ring finger protein 216 pseudogene 1##BC026736|RNF216P1|441191|ring finger protein 216 pseudogene 1##AY424288|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC037881|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC048346|MMD2|221938|monocyte to macrophage differentiation-associated 2##AK094524|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC067905|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_001100600|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_198403|MMD2|221938|monocyte to macrophage differentiation-associated 2##AL080155|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033518|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033519|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_015610|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_016003|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK024279|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC007596|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK023041|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK315468|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC004116|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021200|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021012|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021068|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	0.0	
chr8	20986880	20987005	reg1027939.p1	4.665	+	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	-874196	-	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	-932020	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	-932049	+	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	658850	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	659424	-	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	784223	-	AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa	0.935181	CTCF.p2:-2:0.935
chr15	77472091	77472271	reg1028031.p2	4.664	+	TSC_hg19_v1_chr15_-_77363522 NM_001168412 NM_005724 NM_198902	-108637	-	TSC_hg19_v1_chr15_-_77363454 BC011206 BC000704 AK001326	-108698	-	TSC_hg19_v1_chr15_-_77363389 AF054840 CU674348 AB529127 AF133423 AK293677 AK001310 AK001305 BC004280 BC009248 AK075336 AK075482 AK095520 AK298157	-108895	-	AK091802 AX747193 TSC_hg19_v1_chr15_-_77472798	547	-	TSC_hg19_v1_chr15_-_77712437 NM_024776	240362	-	TSC_hg19_v1_chr15_+_77713043 AK297449 AK311376	240850	+	NM_001168412|TSPAN3|10099|tetraspanin 3##NM_005724|TSPAN3|10099|tetraspanin 3##NM_198902|TSPAN3|10099|tetraspanin 3##BC011206|TSPAN3|10099|tetraspanin 3##BC000704|TSPAN3|10099|tetraspanin 3##AK001326|TSPAN3|10099|tetraspanin 3##AF054840|TSPAN3|10099|tetraspanin 3##AF133423|TSPAN3|10099|tetraspanin 3##AK293677|TSPAN3|10099|tetraspanin 3##AK001310|TSPAN3|10099|tetraspanin 3##AK001305|TSPAN3|10099|tetraspanin 3##BC004280|TSPAN3|10099|tetraspanin 3##BC009248|TSPAN3|10099|tetraspanin 3##AK075336|TSPAN3|10099|tetraspanin 3##AK075482|TSPAN3|10099|tetraspanin 3##AK298157|TSPAN3|10099|tetraspanin 3##AK091802|PEAK1|79834|NKF3 kinase family member##NM_024776|PEAK1|79834|NKF3 kinase family member##AK297449|HMG20A|10363|high mobility group 20A	0.0	
chr16	4700620	4700742	reg1027669.p2	4.664	+	AB383902 CU690664 EF471397 EF471398 TSC_hg19_v1_chr16_+_4675003	-25693	+	TSC_hg19_v1_chr16_+_4674861 AK299052 BC050389 AB011116	-25819	+	TSC_hg19_v1_chr16_+_4674826 NM_001142289 NM_001142290 NM_001142291 NM_015246	-25858	+	BC014199 TSC_hg19_v1_chr16_+_4714741	14117	+	AK315456 NM_001193452 NM_032349 TSC_hg19_v1_chr16_+_4743697	43018	+	TSC_hg19_v1_chr16_+_4743721 BC006223 AK092642 AX747647 CU675299	43037	+	EF471397|MGRN1|23295|mahogunin, ring finger 1##EF471398|MGRN1|23295|mahogunin, ring finger 1##AK299052|MGRN1|23295|mahogunin, ring finger 1##BC050389|MGRN1|23295|mahogunin, ring finger 1##AB011116|MGRN1|23295|mahogunin, ring finger 1##NM_001142289|MGRN1|23295|mahogunin, ring finger 1##NM_001142290|MGRN1|23295|mahogunin, ring finger 1##NM_001142291|MGRN1|23295|mahogunin, ring finger 1##NM_015246|MGRN1|23295|mahogunin, ring finger 1##BC014199|MGRN1|23295|mahogunin, ring finger 1##AK315456|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##NM_001193452|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##NM_032349|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##BC006223|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##AK092642|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1	0.999161	CTCF.p2:-4:0.999
chr19	8412761	8412865	reg1030818.p1	4.664	+	BC035849 TSC_hg19_v1_chr19_-_8408147 AB284126 AK097023 AK128815 BC066124 BC066775 NM_198471	-4678	-	TSC_hg19_v1_chr19_+_8386383 AB055779 AK293636 AK301638 AK311925 BC070217 NM_001031 BC070218 BC000354 BC018810 L05091 U58682 BC021239 DQ891357 DQ894538 CR457055	-26419	+	TSC_hg19_v1_chr19_-_8386300 BC003102 NM_005001	-26527	-	NM_001039667 NM_139314 TSC_hg19_v1_chr19_+_8429039 AB056477 AF202636 AK222489 AK303269 AK222524 AY358275 AF153606 BC023647 AF169312 CU692818	16294	+	TSC_hg19_v1_chr19_+_8455237 NM_004218 AK310573	42406	+	TSC_hg19_v1_chr19_+_8455246 AK312994	42438	+	BC035849|KANK3|256949|KN motif and ankyrin repeat domains 3##AB284126|KANK3|256949|KN motif and ankyrin repeat domains 3##AK128815|KANK3|256949|KN motif and ankyrin repeat domains 3##BC066124|KANK3|256949|KN motif and ankyrin repeat domains 3##BC066775|KANK3|256949|KN motif and ankyrin repeat domains 3##NM_198471|KANK3|256949|KN motif and ankyrin repeat domains 3##AK293636|RPS28|6234|ribosomal protein S28##AK301638|RPS28|6234|ribosomal protein S28##AK311925|RPS28|6234|ribosomal protein S28##BC070217|RPS28|6234|ribosomal protein S28##NM_001031|RPS28|6234|ribosomal protein S28##BC070218|RPS28|6234|ribosomal protein S28##BC000354|RPS28|6234|ribosomal protein S28##BC018810|RPS28|6234|ribosomal protein S28##L05091|RPS28|6234|ribosomal protein S28##U58682|RPS28|6234|ribosomal protein S28##BC021239|RPS28|6234|ribosomal protein S28##DQ891357|RPS28|6234|ribosomal protein S28##DQ894538|RPS28|6234|ribosomal protein S28##CR457055|RPS28|6234|ribosomal protein S28##BC003102|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##NM_005001|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##NM_001039667|ANGPTL4|51129|angiopoietin-like 4##NM_139314|ANGPTL4|51129|angiopoietin-like 4##AB056477|ANGPTL4|51129|angiopoietin-like 4##AF202636|ANGPTL4|51129|angiopoietin-like 4##AK222489|ANGPTL4|51129|angiopoietin-like 4##AK303269|ANGPTL4|51129|angiopoietin-like 4##AK222524|ANGPTL4|51129|angiopoietin-like 4##AY358275|ANGPTL4|51129|angiopoietin-like 4##AF153606|ANGPTL4|51129|angiopoietin-like 4##BC023647|ANGPTL4|51129|angiopoietin-like 4##AF169312|ANGPTL4|51129|angiopoietin-like 4##NM_004218|RAB11B|9230|RAB11B, member RAS oncogene family##AK312994|RAB11B|9230|RAB11B, member RAS oncogene family	0.993671	CTCF.p2:-22:0.994
chr2	44317785	44317909	reg1029100.p2	4.664	+	TSC_hg19_v1_chr2_-_44223145 BC130285 AY289212 NM_133259	-94708	-	BC026034 TSC_hg19_v1_chr2_-_44223116	-94729	-	AK299869 TSC_hg19_v1_chr2_-_44223114 AK125781 AK290016 AK308348	-94734	-	TSC_hg19_v1_chr2_+_44396013 NM_001033556 NM_001033557 NM_002706 NM_177968 NM_177969 AK056009 AK291214 DQ023508 DQ023509 DQ023510 DQ023511 BC064381 AJ271832 AJ271835 BC012002	78168	+	TSC_hg19_v1_chr2_+_44396066 AL833035	78263	+	NM_000341 BC022386 AK309145 AK313157 AB033549 AK091932 AK289636 L11696 M95548 AK223146 BC093624 BC093626 D82326 CU692594 DQ892031 DQ895222 DQ023513 DQ023515 DQ023516 DQ023517	184788	+	BC130285|LRPPRC|10128|leucine-rich PPR-motif containing##AY289212|LRPPRC|10128|leucine-rich PPR-motif containing##NM_133259|LRPPRC|10128|leucine-rich PPR-motif containing##BC026034|LRPPRC|10128|leucine-rich PPR-motif containing##AK299869|LRPPRC|10128|leucine-rich PPR-motif containing##AK125781|LRPPRC|10128|leucine-rich PPR-motif containing##AK290016|LRPPRC|10128|leucine-rich PPR-motif containing##AK308348|LRPPRC|10128|leucine-rich PPR-motif containing##NM_001033556|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_001033557|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_002706|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177968|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_177969|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK056009|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AK291214|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023508|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023509|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023510|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##DQ023511|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC064381|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271832|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AJ271835|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##BC012002|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##AL833035|PPM1B|5495|protein phosphatase, Mg2+/Mn2+ dependent, 1B##NM_000341|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC022386|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK309145|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK313157|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AB033549|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK091932|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK289636|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##L11696|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##M95548|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##AK223146|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093624|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##BC093626|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ892031|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ895222|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023513|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023515|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023516|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1##DQ023517|SLC3A1|6519|solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1	0.29858	CTCF.p2:-32:0.299
chr3	20081430	20081513	reg1025851.p1	4.664	+	BC105097 BC105099 BC021717 AK058178 NM_001252657	-27780	-	TSC_hg19_v1_chr3_+_19988870 AK312618 BC018288 AK309287 AK295992 BC001267	-92570	+	TSC_hg19_v1_chr3_+_19988586 NM_004162	-92782	+	NM_003884 U57317	52	+	BC070075 TSC_hg19_v1_chr3_+_20081907 BC060823 AB527402	439	+	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	146203	-	BC105097|PP2D1|151649|protein phosphatase 2C-like domain containing 1##BC105099|PP2D1|151649|protein phosphatase 2C-like domain containing 1##BC021717|PP2D1|151649|protein phosphatase 2C-like domain containing 1##AK058178|PP2D1|151649|protein phosphatase 2C-like domain containing 1##NM_001252657|PP2D1|151649|protein phosphatase 2C-like domain containing 1##AK312618|RAB5A|5868|RAB5A, member RAS oncogene family##BC018288|RAB5A|5868|RAB5A, member RAS oncogene family##AK309287|RAB5A|5868|RAB5A, member RAS oncogene family##AK295992|RAB5A|5868|RAB5A, member RAS oncogene family##BC001267|RAB5A|5868|RAB5A, member RAS oncogene family##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family##NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B##U57317|KAT2B|8850|K(lysine) acetyltransferase 2B##BC070075|KAT2B|8850|K(lysine) acetyltransferase 2B##BC060823|KAT2B|8850|K(lysine) acetyltransferase 2B##AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)	0.818227	CTCF.p2:-5:0.708
chr4	114604448	114604547	reg1031517.p1	4.664	+	TSC_hg19_v1_chr4_+_114214102 AK294720	-390378	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	-633663	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-865196	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	77784	-	TSC_hg19_v1_chr4_-_114682341 AK294517	77859	-	BC022558 TSC_hg19_v1_chr4_-_114682567	78069	-	AK294720|ANK2|287|ankyrin 2, neuronal##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK294517|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC022558|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.0	
chr9	80103540	80103654	reg1031599.p1	4.664	+	AK027023 TSC_hg19_v1_chr9_+_79968352	-135249	+	TSC_hg19_v1_chr9_+_79792474 AB054005	-311089	+	TSC_hg19_v1_chr9_+_79792336 AF337532 AJ608769 AJ626859 NM_001018037 NM_001018038 NM_015186 NM_033305	-311258	+	BC027886 TSC_hg19_v1_chr9_-_80263240 AK312460 NM_004297	159634	-	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	542587	-	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	747433	+	AK027023|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AB054005|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AF337532|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ608769|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##AJ626859|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018037|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_001018038|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_015186|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##NM_033305|VPS13A|23230|vacuolar protein sorting 13 homolog A (S. cerevisiae)##BC027886|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AK312460|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##NM_004297|GNA14|9630|guanine nucleotide binding protein (G protein), alpha 14##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa	0.091562	
chr12	85818815	85818914	reg1027180.p2	4.663	+	U31986 TSC_hg19_v1_chr12_+_85673999 BC010923 NM_006982	-144905	+	AK022365 NM_001079910 BC005399 BC093088 AK307799	-388741	+	AK126325 NM_001100917	-388810	-	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	411181	-	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	411373	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	449262	+	U31986|ALX1|8092|ALX homeobox 1##BC010923|ALX1|8092|ALX homeobox 1##NM_006982|ALX1|8092|ALX homeobox 1##AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK126325|TSPAN19|144448|tetraspanin 19##NM_001100917|TSPAN19|144448|tetraspanin 19##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin	0.924684	CTCF.p2:0:0.925
chr16	1244749	1244836	reg1028770.p2	4.663	+	AJ420779 TSC_hg19_v1_chr16_+_1203772	-41037	+	AF073931 NM_001005407 NM_021098 TSC_hg19_v1_chr16_+_1203331 AF051946	-41466	+	AY358832 NM_207419	-98549	-	NM_012467 TSC_hg19_v1_chr16_-_1275269	30469	-	BC065923 AK308208 BC029356 NM_024164 BC074974	35386	-	NM_003294 BC074974 BC074975 BC029356	45899	+	AJ420779|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit##AF073931|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit##NM_001005407|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit##NM_021098|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit##AF051946|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit##AY358832|C1QTNF8|390664|C1q and tumor necrosis factor related protein 8##NM_207419|C1QTNF8|390664|C1q and tumor necrosis factor related protein 8##NM_012467|TPSG1|25823|tryptase gamma 1##BC065923|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##AK308208|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##BC029356|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##NM_024164|TPSB2|64499|tryptase beta 2 (gene/pseudogene)##BC074974|TPSAB1|7177|tryptase alpha/beta 1##NM_003294|TPSAB1|7177|tryptase alpha/beta 1##BC074974|TPSAB1|7177|tryptase alpha/beta 1##BC074975|TPSAB1|7177|tryptase alpha/beta 1##BC029356|TPSB2|64499|tryptase beta 2 (gene/pseudogene)	0.995101	CTCF.p2:5:0.995
chr16	68790326	68790506	reg1028168.p1	4.663	+	TSC_hg19_v1_chr16_+_68771304 Z18923	-19105	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	-19171	+	BC144283 TSC_hg19_v1_chr16_+_68771216 AK290012 Z13009	-19197	+	TSC_hg19_v1_chr16_+_68877504 BC092500 AB051533 NM_024562 AB463318	87089	+	AK291400 NM_001199280	349050	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	349724	+	Z18923|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC144283|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK290012|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##Z13009|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC092500|TMCO7|79613|transmembrane and coiled-coil domains 7##AB051533|TMCO7|79613|transmembrane and coiled-coil domains 7##NM_024562|TMCO7|79613|transmembrane and coiled-coil domains 7##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3	0.0	
chr16	74098381	74098497	reg1028860.p2	4.663	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-1005853	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-1016218	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-1106734	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	232254	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	232332	+	TSC_hg19_v1_chr16_-_74401811 AK124154	303373	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.208301	CTCF.p2:-15:0.208
chr3	106328446	106328626	reg1002913.p1	4.663	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-740729	-	CR749655 TSC_hg19_v1_chr3_-_105421064	-907482	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-1242714	+	TSC_hg19_v1_chr3_-_106959482 BC036229	630943	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	631056	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	767774	+	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54	0.0	
chr3	32461943	32462120	reg1021945.p2	4.663	+	TSC_hg19_v1_chr3_+_32433370 BC010116 AY174113 DQ132881 AK308878	-28628	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	-28862	+	TSC_hg19_v1_chr3_+_32280215 BC041390	-181812	+	CR457231 TSC_hg19_v1_chr3_-_32544290	82241	-	TSC_hg19_v1_chr3_-_32544335 AK000403	82302	-	BC002797 TSC_hg19_v1_chr3_-_32544365 NM_017801	82349	-	BC010116|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AY174113|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##DQ132881|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AK308878|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##CR457231|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##AK000403|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##BC002797|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##NM_017801|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6	0.0	
chr5	10401203	10401292	reg1030755.p1	4.663	+	TSC_hg19_v1_chr5_+_10354003 AB385356	-47239	+	TSC_hg19_v1_chr5_+_10353836 AK000970 BC136461 BC136462 BC142679 BC142694	-47383	+	TSC_hg19_v1_chr5_+_10353827 AK300034 BC111494 AB011169 AK296585 AK299339 NM_005885	-47433	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	40756	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	40905	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	163195	+	AK000970|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC136461|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC136462|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC142679|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC142694|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##AK300034|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC111494|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##AB011169|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##AK296585|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##AK299339|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##NM_005885|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B	0.43464	CTCF.p2:31:0.435
chrX	114981611	114981791	reg1006773.p2	4.663	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-153833	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-184659	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-186095	+	BC003645 TSC_hg19_v1_chrX_-_115085443	103738	-	AK313927 NM_000686 X87723 U16957	320294	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	586066	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr11	19278718	19278812	reg1031631.p1	4.662	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-15564	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-16290	-	U20324 U72899 U49837 BC057221 NM_001127656 TSC_hg19_v1_chr11_-_19223531 AK313289 NM_003476 AF121260	-55207	-	AB063115 NM_001111018 AJ488205	93550	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	456101	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	765623	+	AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##U20324|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U72899|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U49837|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##BC057221|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_001127656|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AK313289|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_003476|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AF121260|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2	0.679583	CTCF.p2:-1:0.680
chr1	169103516	169103616	reg1028556.p1	4.662	+	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	-27597	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	-405137	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-557774	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	233526	-	NM_003666 AF288161 U79751 AK223533	233657	+	TSC_hg19_v1_chr1_+_169337450 AK307151 AK291725 BC020716	233883	+	AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_003666|BLZF1|8548|basic leucine zipper nuclear factor 1##AF288161|BLZF1|8548|basic leucine zipper nuclear factor 1##U79751|BLZF1|8548|basic leucine zipper nuclear factor 1##AK223533|BLZF1|8548|basic leucine zipper nuclear factor 1##AK307151|BLZF1|8548|basic leucine zipper nuclear factor 1##AK291725|BLZF1|8548|basic leucine zipper nuclear factor 1##BC020716|BLZF1|8548|basic leucine zipper nuclear factor 1	0.0	
chr1	184836244	184836365	reg1030632.p1	4.662	+	TSC_hg19_v1_chr1_-_184724031 NM_025191	-112273	-	AK023095 TSC_hg19_v1_chr1_-_184724001	-112300	-	AK225171 TSC_hg19_v1_chr1_-_184723985 AK315118	-112320	-	BC018532 AK022527 AY550972 TSC_hg19_v1_chr1_-_184943641 BC030531 AK310557 AK311019 AK127373 AB050477	107285	-	TSC_hg19_v1_chr1_-_184943680 AF288391 NM_052966	107385	-	TSC_hg19_v1_chr1_+_185014449 NM_007212 AF141327	178199	+	NM_025191|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK023095|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK225171|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK315118|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC018532|FAM129A|116496|family with sequence similarity 129, member A##AK022527|FAM129A|116496|family with sequence similarity 129, member A##AY550972|FAM129A|116496|family with sequence similarity 129, member A##BC030531|FAM129A|116496|family with sequence similarity 129, member A##AK310557|FAM129A|116496|family with sequence similarity 129, member A##AK311019|FAM129A|116496|family with sequence similarity 129, member A##AB050477|FAM129A|116496|family with sequence similarity 129, member A##AF288391|FAM129A|116496|family with sequence similarity 129, member A##NM_052966|FAM129A|116496|family with sequence similarity 129, member A##NM_007212|RNF2|6045|ring finger protein 2##AF141327|RNF2|6045|ring finger protein 2	0.0	
chr4	145493942	145494056	reg1029948.p1	4.662	+	AY950614 DQ893046 L07251 L07253 S77893 U00177 U00178 U00179 X57023 M12857 M36281 X51798 BC013328 EU338231 EU338232 EU338233 EU338234 L31860 X08054 BC005319 AK290561 NM_002099	-432154	-	AY509882 AY509883 AY950609 AY950610 AY950611 AY950612 U05255 J02982 BC121077 BC121078 EU338223 EU338224 EU338225 EU338226 EU338227 EU338228 EU338229 EU338230 EU338235 EU338236 EU338237 EU338238 BC069310 X08055 NM_002100	-553532	-	EU176664 BC064396 BC017864 M29610 NM_002102 NM_198682	-667312	-	NM_022475 AY009951 TSC_hg19_v1_chr4_+_145567307 AY009317 BC025311 BC015636 BC009298	73249	+	NM_001040876 NM_002940	525156	+	TSC_hg19_v1_chr4_-_146019349 AF132794 AL080090 BC005217 AB012109 NM_014885	525338	-	AY950614|GYPA|2993|glycophorin A (MNS blood group)##DQ893046|GYPA|2993|glycophorin A (MNS blood group)##L07251|GYPA|2993|glycophorin A (MNS blood group)##L07253|GYPA|2993|glycophorin A (MNS blood group)##U00177|GYPA|2993|glycophorin A (MNS blood group)##U00178|GYPA|2993|glycophorin A (MNS blood group)##U00179|GYPA|2993|glycophorin A (MNS blood group)##X57023|GYPA|2993|glycophorin A (MNS blood group)##M12857|GYPA|2993|glycophorin A (MNS blood group)##M36281|GYPA|2993|glycophorin A (MNS blood group)##X51798|GYPA|2993|glycophorin A (MNS blood group)##BC013328|GYPA|2993|glycophorin A (MNS blood group)##EU338231|GYPA|2993|glycophorin A (MNS blood group)##EU338232|GYPA|2993|glycophorin A (MNS blood group)##EU338233|GYPA|2993|glycophorin A (MNS blood group)##EU338234|GYPA|2993|glycophorin A (MNS blood group)##L31860|GYPA|2993|glycophorin A (MNS blood group)##X08054|GYPA|2993|glycophorin A (MNS blood group)##BC005319|GYPA|2993|glycophorin A (MNS blood group)##AK290561|GYPA|2993|glycophorin A (MNS blood group)##NM_002099|GYPA|2993|glycophorin A (MNS blood group)##AY509882|GYPB|2994|glycophorin B (MNS blood group)##AY509883|GYPB|2994|glycophorin B (MNS blood group)##AY950609|GYPB|2994|glycophorin B (MNS blood group)##AY950610|GYPB|2994|glycophorin B (MNS blood group)##AY950611|GYPB|2994|glycophorin B (MNS blood group)##U05255|GYPB|2994|glycophorin B (MNS blood group)##J02982|GYPB|2994|glycophorin B (MNS blood group)##BC121077|GYPB|2994|glycophorin B (MNS blood group)##BC121078|GYPB|2994|glycophorin B (MNS blood group)##EU338223|GYPB|2994|glycophorin B (MNS blood group)##EU338224|GYPB|2994|glycophorin B (MNS blood group)##EU338225|GYPB|2994|glycophorin B (MNS blood group)##EU338226|GYPB|2994|glycophorin B (MNS blood group)##EU338227|GYPB|2994|glycophorin B (MNS blood group)##EU338228|GYPB|2994|glycophorin B (MNS blood group)##EU338229|GYPB|2994|glycophorin B (MNS blood group)##EU338230|GYPB|2994|glycophorin B (MNS blood group)##EU338235|GYPB|2994|glycophorin B (MNS blood group)##EU338236|GYPB|2994|glycophorin B (MNS blood group)##EU338237|GYPB|2994|glycophorin B (MNS blood group)##EU338238|GYPB|2994|glycophorin B (MNS blood group)##BC069310|GYPB|2994|glycophorin B (MNS blood group)##X08055|GYPB|2994|glycophorin B (MNS blood group)##NM_002100|GYPB|2994|glycophorin B (MNS blood group)##EU176664|GYPE|2996|glycophorin E (MNS blood group)##BC064396|GYPE|2996|glycophorin E (MNS blood group)##BC017864|GYPE|2996|glycophorin E (MNS blood group)##M29610|GYPE|2996|glycophorin E (MNS blood group)##NM_002102|GYPE|2996|glycophorin E (MNS blood group)##NM_198682|GYPE|2996|glycophorin E (MNS blood group)##NM_022475|HHIP|64399|hedgehog interacting protein##AY009951|HHIP|64399|hedgehog interacting protein##AY009317|HHIP|64399|hedgehog interacting protein##BC025311|HHIP|64399|hedgehog interacting protein##BC015636|HHIP|64399|hedgehog interacting protein##BC009298|HHIP|64399|hedgehog interacting protein##NM_001040876|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##NM_002940|ABCE1|6059|ATP-binding cassette, sub-family E (OABP), member 1##AF132794|ANAPC10|10393|anaphase promoting complex subunit 10##AL080090|ANAPC10|10393|anaphase promoting complex subunit 10##BC005217|ANAPC10|10393|anaphase promoting complex subunit 10##AB012109|ANAPC10|10393|anaphase promoting complex subunit 10##NM_014885|ANAPC10|10393|anaphase promoting complex subunit 10	1.89204	CTCF.p2:-8:0.916	CTCF.p2:73:0.976
chr10	62309579	62309718	reg1030724.p1	4.661	+	U13616 NM_020987	-160088	-	AK292927 AK092527 NM_001149	-408932	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-643324	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	23042	-	EU832293 EU832377 AK172736 BX537917 TSC_hg19_v1_chr10_-_62493273 BX648574	183529	-	TSC_hg19_v1_chr10_-_62493282 NM_001204403	183636	-	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832293|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832377|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX537917|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX648574|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204403|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.021954	
chr11	92968091	92968225	reg1000217.p2	4.661	+	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	-37073	-	TSC_hg19_v1_chr11_-_92930978 CU690400	-37171	-	BC069163 NM_005959 U25341 AY521019	-265319	+	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	95685	+	AF197137 TSC_hg19_v1_chr11_-_93276558 BC031564 NM_020179	308377	-	TSC_hg19_v1_chr11_+_93394847 NM_033395 BC015989 BC017394	426676	+	AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B##NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67##AF197137|C11orf75|56935|chromosome 11 open reading frame 75##BC031564|C11orf75|56935|chromosome 11 open reading frame 75##NM_020179|C11orf75|56935|chromosome 11 open reading frame 75##NM_033395|KIAA1731|85459|KIAA1731##BC015989|KIAA1731|85459|KIAA1731##BC017394|KIAA1731|85459|KIAA1731	0.0	
chr20	43227218	43227369	reg1030420.p1	4.661	+	AK309209 TSC_hg19_v1_chr20_+_43211227	-16070	+	NM_007066 NM_181804 NM_181805 BC104256 BC104257 TSC_hg19_v1_chr20_+_43160482 AK312048 AF182032	-66777	+	AK295120 AK309993 TSC_hg19_v1_chr20_-_43150704 NM_006811 NM_198941	-76586	-	AB528992 DQ892681 DQ895924 TSC_hg19_v1_chr20_-_43280341 X02994 AK223397	53005	-	BC007678 TSC_hg19_v1_chr20_-_43280372 BC040226 NM_000022	53082	-	BC058074 TSC_hg19_v1_chr20_+_43343549 AK074695	116249	+	AK309209|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_007066|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_181804|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_181805|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##BC104256|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##BC104257|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AK312048|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AF182032|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AK295120|SERINC3|10955|serine incorporator 3##AK309993|SERINC3|10955|serine incorporator 3##NM_006811|SERINC3|10955|serine incorporator 3##NM_198941|SERINC3|10955|serine incorporator 3##DQ892681|ADA|100|adenosine deaminase##DQ895924|ADA|100|adenosine deaminase##X02994|ADA|100|adenosine deaminase##AK223397|ADA|100|adenosine deaminase##BC007678|ADA|100|adenosine deaminase##BC040226|ADA|100|adenosine deaminase##NM_000022|ADA|100|adenosine deaminase##BC058074|WISP2|8839|WNT1 inducible signaling pathway protein 2	0.0	
chr2	47403993	47404173	reg1027457.p2	4.661	+	TSC_hg19_v1_chr2_-_47403685 NM_001743	-374	-	TSC_hg19_v1_chr2_-_47403656 BC008437	-429	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	-433	-	NM_002354 TSC_hg19_v1_chr2_+_47596376	192259	+	TSC_hg19_v1_chr2_+_47596449 AK026585 BC014785 M26481 M32325 X14758 M33011 M32306 DQ891338 DQ894520 CR542259 CR542283	192462	+	TSC_hg19_v1_chr2_+_47630218 AK304496	226121	+	NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC008437|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##NM_002354|EPCAM|4072|epithelial cell adhesion molecule##AK026585|EPCAM|4072|epithelial cell adhesion molecule##BC014785|EPCAM|4072|epithelial cell adhesion molecule##M26481|EPCAM|4072|epithelial cell adhesion molecule##M32325|EPCAM|4072|epithelial cell adhesion molecule##X14758|EPCAM|4072|epithelial cell adhesion molecule##M33011|EPCAM|4072|epithelial cell adhesion molecule##M32306|EPCAM|4072|epithelial cell adhesion molecule##DQ891338|EPCAM|4072|epithelial cell adhesion molecule##DQ894520|EPCAM|4072|epithelial cell adhesion molecule##CR542259|EPCAM|4072|epithelial cell adhesion molecule##CR542283|EPCAM|4072|epithelial cell adhesion molecule##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.0	
chr2	9892915	9893095	reg1023433.p1	4.661	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-121880	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	-121956	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	-122392	-	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	90615	+	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	198845	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	290787	+	NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11	0.0	
chr7	44240536	44240716	reg1028372.p2	4.661	+	TSC_hg19_v1_chr7_+_44240631 AK223488	-6	+	TSC_hg19_v1_chr7_+_44240576 NM_006555 AK312622	-48	+	TSC_hg19_v1_chr7_+_44240564 AK299158	-66	+	TSC_hg19_v1_chr7_+_44240639 BC007319 AF091079 U95735 DQ890653 DQ893833 CU675611 AB451317 AB451447 BT007078 CR456989 CR542008	60	+	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	124665	-	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	289655	-	AK223488|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##NM_006555|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK312622|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK299158|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BC007319|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AF091079|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##U95735|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ890653|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ893833|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451317|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451447|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BT007078|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR456989|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR542008|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3	0.186921	
chr5	77656250	77656346	reg1029095.p2	4.660	+	TSC_hg19_v1_chr5_-_77656217 AK129849	-83	-	BC039455 TSC_hg19_v1_chr5_-_77656182	-117	-	TSC_hg19_v1_chr5_-_77590517 BC020230 BX538041 BC038444 AK291201 NM_003664	-65784	-	NM_004866 TSC_hg19_v1_chr5_+_77656440 AF038966 AK304452 AK225172 BC009787 BC015065 AK298146 BC034048 AK290225 CR542286 CU677209	118	+	D86961 BC136335 BC136336 AY309920 TSC_hg19_v1_chr5_-_77806179	149756	-	TSC_hg19_v1_chr5_-_77806191 AK125227	149898	-	AK129849|LOC728769|728769|uncharacterized LOC728769##BC020230|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##BX538041|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##BC038444|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK291201|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##NM_003664|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##NM_004866|SCAMP1|9522|secretory carrier membrane protein 1##AF038966|SCAMP1|9522|secretory carrier membrane protein 1##AK304452|SCAMP1|9522|secretory carrier membrane protein 1##AK225172|SCAMP1|9522|secretory carrier membrane protein 1##BC009787|SCAMP1|9522|secretory carrier membrane protein 1##BC015065|SCAMP1|9522|secretory carrier membrane protein 1##AK298146|SCAMP1|9522|secretory carrier membrane protein 1##BC034048|SCAMP1|9522|secretory carrier membrane protein 1##AK290225|SCAMP1|9522|secretory carrier membrane protein 1##CR542286|SCAMP1|9522|secretory carrier membrane protein 1##D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2	0.0	
chr6	75053680	75053860	reg1030341.p2	4.660	+	TSC_hg19_v1_chr6_+_74406033 AY149920	-647746	+	EF553520 TSC_hg19_v1_chr6_+_74405925 AY788891 BX641095	-647850	+	TSC_hg19_v1_chr6_+_74405882 AK095888	-647899	+	BC146868 U73778 NM_004370 NM_080645 TSC_hg19_v1_chr6_-_75915745	861885	-	TSC_hg19_v1_chr6_-_75915768 AK307558	862010	-	CR407646 CR542125 X15822 TSC_hg19_v1_chr6_-_75953494 BC101826 BC101828 AK312154	899709	-	AY149920|CD109|135228|CD109 molecule##EF553520|CD109|135228|CD109 molecule##AY788891|CD109|135228|CD109 molecule##BX641095|CD109|135228|CD109 molecule##AK095888|CD109|135228|CD109 molecule##BC146868|COL12A1|1303|collagen, type XII, alpha 1##U73778|COL12A1|1303|collagen, type XII, alpha 1##NM_004370|COL12A1|1303|collagen, type XII, alpha 1##NM_080645|COL12A1|1303|collagen, type XII, alpha 1##AK307558|COL12A1|1303|collagen, type XII, alpha 1##CR407646|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##CR542125|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##X15822|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101826|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##BC101828|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AK312154|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)	0.995784	CTCF.p2:-46:0.996
chr8	6635314	6635486	reg1029090.p1	4.660	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	-69217	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	-69460	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	-69509	+	AY534243 AY358489 AY534242 NM_207411	57692	-	BC033298 BC047677 X92744 U73945 NM_005218	100083	-	M98331 BC093951 BC093953 BC069667 BC069710 BC069728 BC069769 NM_001926	148185	-	AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AY534243|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY358489|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY534242|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##NM_207411|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##BC033298|DEFB1|1672|defensin, beta 1##BC047677|DEFB1|1672|defensin, beta 1##X92744|DEFB1|1672|defensin, beta 1##U73945|DEFB1|1672|defensin, beta 1##NM_005218|DEFB1|1672|defensin, beta 1##M98331|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093951|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093953|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069667|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069710|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069728|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069769|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##NM_001926|DEFA6|1671|defensin, alpha 6, Paneth cell-specific	0.0	
chrX	134971267	134971414	reg1029759.p1	4.660	+	BC140913 BC144429 BC144430 BC140735 BC140926 BC144437 AK098689 AY743714 NM_001017438	-148	-	BC144527 BC144528 AY743713 NM_001007551 NM_001172288	-17395	-	AY743711 AY743712 NM_001017436	-34606	-	AJ278111 NM_018666 AK310412 BC144260	4494	+	AB528252 AM393753 TSC_hg19_v1_chrX_-_135055928	84545	-	AL157477 BC033588 NM_173470 TSC_hg19_v1_chrX_-_135056148 AK312409 AK295829	84819	-	BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1##BC144429|CT45A5|441521|cancer/testis antigen family 45, member A5##BC144430|CT45A5|441521|cancer/testis antigen family 45, member A5##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##AK098689|CT45A4|441520|cancer/testis antigen family 45, member A4##AY743714|CT45A6|541465|cancer/testis antigen family 45, member A6##NM_001017438|CT45A6|541465|cancer/testis antigen family 45, member A6##BC144527|CT45A5|441521|cancer/testis antigen family 45, member A5##BC144528|CT45A5|441521|cancer/testis antigen family 45, member A5##AY743713|CT45A5|441521|cancer/testis antigen family 45, member A5##NM_001007551|CT45A5|441521|cancer/testis antigen family 45, member A5##NM_001172288|CT45A5|441521|cancer/testis antigen family 45, member A5##AY743711|CT45A3|441519|cancer/testis antigen family 45, member A3##AY743712|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_001017436|CT45A4|441520|cancer/testis antigen family 45, member A4##AJ278111|SAGE1|55511|sarcoma antigen 1##NM_018666|SAGE1|55511|sarcoma antigen 1##AK310412|SAGE1|55511|sarcoma antigen 1##BC144260|SAGE1|55511|sarcoma antigen 1##AM393753|MMGT1|93380|membrane magnesium transporter 1##AL157477|MMGT1|93380|membrane magnesium transporter 1##BC033588|MMGT1|93380|membrane magnesium transporter 1##NM_173470|MMGT1|93380|membrane magnesium transporter 1##AK312409|MMGT1|93380|membrane magnesium transporter 1##AK295829|MMGT1|93380|membrane magnesium transporter 1	1.362009	CTCF.p2:0:0.998	CTCF.p2:-84:0.364
chrX	73070361	73070432	reg1024580.p1	4.660	+	TSC_hg19_v1_chrX_+_72783126 AB529212 AK297768 BC050300 AL832095	-287170	+	TSC_hg19_v1_chrX_+_72783043 CR936642 BC127727 BC127728 BC136691 BC136692	-287341	+	TSC_hg19_v1_chrX_+_72782961 AK295903 NM_001039840	-287424	+	BC071776 TSC_hg19_v1_chrX_+_73164176 AK056172	93773	+	TSC_hg19_v1_chrX_-_73512419 AK057701	442009	-	TSC_hg19_v1_chrX_-_73513379 AK311345	442978	-	AK297768|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC050300|CHIC1|53344|cysteine-rich hydrophobic domain 1##AL832095|CHIC1|53344|cysteine-rich hydrophobic domain 1##CR936642|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC127727|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC127728|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC136691|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC136692|CHIC1|53344|cysteine-rich hydrophobic domain 1##AK295903|CHIC1|53344|cysteine-rich hydrophobic domain 1##NM_001039840|CHIC1|53344|cysteine-rich hydrophobic domain 1##BC071776|JPX|554203|JPX transcript, XIST activator (non-protein coding)##AK056172|JPX|554203|JPX transcript, XIST activator (non-protein coding)##AK057701|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##AK311345|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)	0.990463	CTCF.p2:3:0.990
chr10	99519312	99519403	reg1029643.p1	4.659	+	NM_001002261 AL834235	-21091	+	TSC_hg19_v1_chr10_+_99496947 BX647836	-22414	+	TSC_hg19_v1_chr10_+_99496905 AK296588	-22440	+	BC050435 AF117758 NM_003015	12376	-	BC110810 NM_001010917	90637	+	AK292084 AJ276171 TSC_hg19_v1_chr10_-_99790379	271005	-	NM_001002261|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AL834235|ZFYVE27|118813|zinc finger, FYVE domain containing 27##BX647836|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK296588|ZFYVE27|118813|zinc finger, FYVE domain containing 27##BC050435|SFRP5|6425|secreted frizzled-related protein 5##AF117758|SFRP5|6425|secreted frizzled-related protein 5##NM_003015|SFRP5|6425|secreted frizzled-related protein 5##BC110810|GOLGA7B|401647|golgin A7 family, member B##NM_001010917|GOLGA7B|401647|golgin A7 family, member B##AK292084|CRTAC1|55118|cartilage acidic protein 1##AJ276171|CRTAC1|55118|cartilage acidic protein 1	0.999915	CTCF.p2:5:1.000
chr1	209996557	209996675	reg1035657.p1	4.659	+	BC014852 AK312857 AK296960 TSC_hg19_v1_chr1_-_209979488 NM_001206696 NM_006147	-17163	-	TSC_hg19_v1_chr1_-_209957872 BC039719 NM_152485 AK057807	-38729	-	TSC_hg19_v1_chr1_+_209941909 AK126139	-54700	+	TSC_hg19_v1_chr1_+_210001335 NM_014388 AK314061 AK289613	4687	+	BC022964 TSC_hg19_v1_chr1_+_210001361	4740	+	TSC_hg19_v1_chr1_+_210001363 CR749825	4753	+	BC014852|IRF6|3664|interferon regulatory factor 6##AK312857|IRF6|3664|interferon regulatory factor 6##AK296960|IRF6|3664|interferon regulatory factor 6##NM_001206696|IRF6|3664|interferon regulatory factor 6##NM_006147|IRF6|3664|interferon regulatory factor 6##BC039719|C1orf74|148304|chromosome 1 open reading frame 74##NM_152485|C1orf74|148304|chromosome 1 open reading frame 74##AK057807|C1orf74|148304|chromosome 1 open reading frame 74##AK126139|TRAF3IP3|80342|TRAF3 interacting protein 3##NM_014388|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##AK314061|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##AK289613|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##BC022964|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##CR749825|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)	0.723492	CTCF.p2:10:0.723
chr16	10274815	10274922	reg1001304.p2	4.659	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-1089265	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-1089328	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-1217573	-	BC143273 U09002 NM_001134408	965	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	1320	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	1809	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.0	
chr16	10834761	10834936	reg1025678.p1	4.659	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-46083	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	-160358	-	NM_024997 BC137079 BC144468	-312108	+	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	2856	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	77700	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	136264	+	HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator	0.099481	
chr19	17294856	17294947	reg1028672.p2	4.659	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-108308	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-108580	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-157361	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	31271	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	31304	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	42133	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.0	
chr19	49979641	49979748	reg1028655.p2	4.659	+	NM_001204503 U03858 AK301136 TSC_hg19_v1_chr19_+_49977846 HQ258599	-1838	+	NM_001204502 NM_001459 TSC_hg19_v1_chr19_+_49977483 U04806 BC006331 BC011914 BC028001 BC126293 BC136464 BC144129	-2196	+	AK297101 TSC_hg19_v1_chr19_+_49956529 BC014895 AK024182 AK301246	-23164	+	TSC_hg19_v1_chr19_+_49990861 AK130605	11162	+	AK056837 AK291120 AK297859 BC070223 BC105605 D28409 NM_012423 TSC_hg19_v1_chr19_+_49990864 X56932 BC032107 BC065236 BC071929 BC000514 BC001675 BC001836 AK222747 BC062537 AB529025 CU687556 EU831455 EU831542 BC013230	11189	+	NM_001015 TSC_hg19_v1_chr19_+_49999653	19953	+	NM_001204503|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##U03858|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##AK301136|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##HQ258599|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##NM_001204502|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##NM_001459|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##U04806|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC006331|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC011914|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC028001|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC126293|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC136464|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC144129|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##AK297101|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##BC014895|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK024182|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK301246|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK130605|RPL13A|23521|ribosomal protein L13a##AK056837|RPL13A|23521|ribosomal protein L13a##AK291120|RPL13A|23521|ribosomal protein L13a##AK297859|RPL13A|23521|ribosomal protein L13a##BC070223|RPL13A|23521|ribosomal protein L13a##BC105605|RPL13A|23521|ribosomal protein L13a##NM_012423|RPL13A|23521|ribosomal protein L13a##X56932|RPL13A|23521|ribosomal protein L13a##BC032107|RPL13A|23521|ribosomal protein L13a##BC065236|RPL13A|23521|ribosomal protein L13a##BC071929|RPL13A|23521|ribosomal protein L13a##BC000514|RPL13A|23521|ribosomal protein L13a##BC001675|RPL13A|23521|ribosomal protein L13a##BC001836|RPL13A|23521|ribosomal protein L13a##AK222747|RPL13A|23521|ribosomal protein L13a##BC062537|RPL13A|23521|ribosomal protein L13a##EU831455|RPL13A|23521|ribosomal protein L13a##EU831542|RPL13A|23521|ribosomal protein L13a##BC013230|RPL13A|23521|ribosomal protein L13a##NM_001015|RPS11|6205|ribosomal protein S11	0.018956	
chr3	48723018	48723166	reg1019613.p1	4.659	+	TSC_hg19_v1_chr3_-_48700322 AF231023 NM_001407	-22757	-	AK056237 NM_022911 NM_134263 NM_134426 TSC_hg19_v1_chr3_-_48672944	-50145	-	TSC_hg19_v1_chr3_-_48672883 DQ891721 EU176609 EU832127 AF288410 AF416721 AK297695 BC017697 AB033288	-50245	-	AB384897 CU677561 BC016052 BC006255 TSC_hg19_v1_chr3_-_48723349 AF303581 BC026280 AF178432 AJ242655 AY453794 NM_016453 NM_184231	203	-	TSC_hg19_v1_chr3_-_48754622 BC019694 AK291501 AY007091 BC001864 BC065533 BC004469 AK304714 AK315204 AK024045 AK290526 AL137514 BX537544 NM_001005909 NM_001005910 NM_001005911 NM_001146178 NM_001146179 NM_001190316 NM_001190317 NM_016291	31557	-	BT007225 AB464095 CU678176 TSC_hg19_v1_chr3_-_48885175	162017	-	AF231023|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)##NM_001407|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)##AK056237|SLC26A6|65010|solute carrier family 26, member 6##NM_022911|SLC26A6|65010|solute carrier family 26, member 6##NM_134263|SLC26A6|65010|solute carrier family 26, member 6##NM_134426|SLC26A6|65010|solute carrier family 26, member 6##DQ891721|SLC26A6|65010|solute carrier family 26, member 6##EU176609|SLC26A6|65010|solute carrier family 26, member 6##EU832127|SLC26A6|65010|solute carrier family 26, member 6##AF288410|SLC26A6|65010|solute carrier family 26, member 6##AF416721|SLC26A6|65010|solute carrier family 26, member 6##AK297695|SLC26A6|65010|solute carrier family 26, member 6##BC017697|SLC26A6|65010|solute carrier family 26, member 6##AB033288|SLC26A6|65010|solute carrier family 26, member 6##BC016052|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC006255|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF303581|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC026280|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF178432|NCKIPSD|51517|NCK interacting protein with SH3 domain##AJ242655|NCKIPSD|51517|NCK interacting protein with SH3 domain##AY453794|NCKIPSD|51517|NCK interacting protein with SH3 domain##NM_016453|NCKIPSD|51517|NCK interacting protein with SH3 domain##NM_184231|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2##AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2##AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2##BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2##BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2##BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2##AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2##AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2##AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2##AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2##AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2##BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2##BT007225|PRKAR2A|5576|protein kinase, cAMP-dependent, regulatory, type II, alpha	0.137593	
chr6	18504015	18504195	reg1000795.p1	4.659	+	AK096832 NM_182757 AB076367 BC063311 AL832329	-116438	+	X64229 TSC_hg19_v1_chr6_-_18264759 BC012442 AK312616 AK298089 AK294079 BC035259 AK297749 NM_001134709 NM_003472	-239384	-	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	-348450	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	1333530	+	TSC_hg19_v1_chr6_+_19838612 AF085889	1334578	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	1708567	-	AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##X64229|DEK|7913|DEK oncogene##BC012442|DEK|7913|DEK oncogene##AK312616|DEK|7913|DEK oncogene##AK298089|DEK|7913|DEK oncogene##AK294079|DEK|7913|DEK oncogene##BC035259|DEK|7913|DEK oncogene##AK297749|DEK|7913|DEK oncogene##NM_001134709|DEK|7913|DEK oncogene##NM_003472|DEK|7913|DEK oncogene##BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1	0.0	
chr11	67236564	67236665	reg1005727.p1	4.658	+	AY039217 NM_145200	-13797	+	AY569571 BC119779 BC122869 NM_206997	-16415	-	NM_001018070	-25323	-	AK310743 TSC_hg19_v1_chr11_-_67236717 AK296988 AY007143 BC013883 BC051854 BC125134 AK303342 NM_001078650 NM_001078651 NM_025124 AK025402	87	-	NM_003977 TSC_hg19_v1_chr11_+_67250510 U78521	13898	+	TSC_hg19_v1_chr11_+_67250595 BC104797 BC104827 U31913 AB529203 EU446613	13998	+	AY039217|CABP4|57010|calcium binding protein 4##NM_145200|CABP4|57010|calcium binding protein 4##AY569571|GPR152|390212|G protein-coupled receptor 152##BC119779|GPR152|390212|G protein-coupled receptor 152##BC122869|GPR152|390212|G protein-coupled receptor 152##NM_206997|GPR152|390212|G protein-coupled receptor 152##NM_001018070|CORO1B|57175|coronin, actin binding protein, 1B##AK310743|TMEM134|80194|transmembrane protein 134##AK296988|TMEM134|80194|transmembrane protein 134##AY007143|TMEM134|80194|transmembrane protein 134##BC013883|TMEM134|80194|transmembrane protein 134##BC051854|TMEM134|80194|transmembrane protein 134##BC125134|TMEM134|80194|transmembrane protein 134##AK303342|TMEM134|80194|transmembrane protein 134##NM_001078650|TMEM134|80194|transmembrane protein 134##NM_001078651|TMEM134|80194|transmembrane protein 134##NM_025124|TMEM134|80194|transmembrane protein 134##AK025402|TMEM134|80194|transmembrane protein 134##NM_003977|AIP|9049|aryl hydrocarbon receptor interacting protein##U78521|AIP|9049|aryl hydrocarbon receptor interacting protein##BC104797|AIP|9049|aryl hydrocarbon receptor interacting protein##BC104827|AIP|9049|aryl hydrocarbon receptor interacting protein##U31913|AIP|9049|aryl hydrocarbon receptor interacting protein##EU446613|AIP|9049|aryl hydrocarbon receptor interacting protein	0.0	
chr11	77268725	77268831	reg1032776.p1	4.658	+	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	-83946	-	TSC_hg19_v1_chr11_-_77122998 AK296006 AK055228	-145779	-	AY313782 AY326450 NM_182833	-270316	-	BC040443 NM_173039 TSC_hg19_v1_chr11_+_77300718 AB028147	31922	+	AB590787 AF026003 BT019907 AF005422 BC119634 BC119635 TSC_hg19_v1_chr11_-_77348840 U53454 AK315259 X91788 NM_001293	80036	-	AF380176 AB527448 TSC_hg19_v1_chr11_-_77531769 BC015360 NM_016578 AK098130	263054	-	U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK296006|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK055228|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##BC040443|AQP11|282679|aquaporin 11##NM_173039|AQP11|282679|aquaporin 11##AB028147|AQP11|282679|aquaporin 11##AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF380176|RSF1|51773|remodeling and spacing factor 1##BC015360|RSF1|51773|remodeling and spacing factor 1##NM_016578|RSF1|51773|remodeling and spacing factor 1	0.998053	CTCF.p2:6:0.998
chr15	33173877	33173989	reg1030748.p2	4.658	+	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-162767	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-163676	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	-240019	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	186302	-	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	429236	+	TSC_hg19_v1_chr15_-_34212524 BC037796	1038625	-	AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3	0.924095	CTCF.p2:-6:0.924
chr15	84105435	84105560	reg1028718.p2	4.658	+	L03427 NM_001717 TSC_hg19_v1_chr15_-_83953480	-152019	-	TSC_hg19_v1_chr15_-_83952207 AK302992	-153295	-	BC040554 TSC_hg19_v1_chr15_-_83876823	-228701	-	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	10563	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	10731	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	217330	+	L03427|BNC1|646|basonuclin 1##NM_001717|BNC1|646|basonuclin 1##AK302992|BNC1|646|basonuclin 1##BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3	0.190069	
chr17	3699895	3700076	reg1030820.p2	4.658	+	TSC_hg19_v1_chr17_+_3627210 AK310546 AK315247 BC036181 NM_031965 AK056691 AB039834 AF289865 BC050662 AK292715 BC016626 BC047457	-72769	+	TSC_hg19_v1_chr17_-_3627077 AF289864	-72883	-	AB209623 BC016917 AK307959 TSC_hg19_v1_chr17_-_3599535 BC008319 AK290889 NM_001204519 NM_001204520 NM_002561 NM_175080	-100393	-	HQ258689 TSC_hg19_v1_chr17_-_3704463	4468	-	TSC_hg19_v1_chr17_-_3704490 BC113436 BC117207 NM_002208	4526	-	TSC_hg19_v1_chr17_-_3749541 NM_001114118 NM_018553	49525	-	BC036181|GSG2|83903|germ cell associated 2 (haspin)##NM_031965|GSG2|83903|germ cell associated 2 (haspin)##AK056691|GSG2|83903|germ cell associated 2 (haspin)##AB039834|GSG2|83903|germ cell associated 2 (haspin)##AF289865|GSG2|83903|germ cell associated 2 (haspin)##BC050662|GSG2|83903|germ cell associated 2 (haspin)##AK292715|GSG2|83903|germ cell associated 2 (haspin)##BC016626|GSG2|83903|germ cell associated 2 (haspin)##BC047457|GSG2|83903|germ cell associated 2 (haspin)##AF289864|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##AB209623|P2RX5-TAX1BP3|100533970|P2RX5-TAX1BP3 readthrough##BC016917|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK307959|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC008319|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK290889|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204519|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204520|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_002561|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_175080|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##HQ258689|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC113436|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC117207|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_002208|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_001114118|C17orf85|55421|chromosome 17 open reading frame 85##NM_018553|C17orf85|55421|chromosome 17 open reading frame 85	0.0	
chr3	39195182	39195250	reg1022523.p3	4.658	+	NM_033027 TSC_hg19_v1_chr3_-_39195146	-92	-	TSC_hg19_v1_chr3_-_39195053 BC038949 AB053121 BC028213	-165	-	NM_001105513 NM_145755 AJ487015 BC062621 BC129948 AK022483 BC039691 AK302408 AK302465 CU687576	-45977	+	BC127119 BC139782 AY375160 NM_194293 TSC_hg19_v1_chr3_-_39234085 AJ626899 AJ626900 NM_001198621 AK096421 BX648565 CR749430	38869	-	U28934 BC028078 U20350 AK307911 AK312373 AK225764 BC017855 NM_001337	126286	-	NM_001171172	126713	-	NM_033027|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC038949|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##AB053121|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC028213|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##NM_001105513|TTC21A|199223|tetratricopeptide repeat domain 21A##NM_145755|TTC21A|199223|tetratricopeptide repeat domain 21A##AJ487015|TTC21A|199223|tetratricopeptide repeat domain 21A##BC062621|TTC21A|199223|tetratricopeptide repeat domain 21A##BC129948|TTC21A|199223|tetratricopeptide repeat domain 21A##AK022483|TTC21A|199223|tetratricopeptide repeat domain 21A##BC039691|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302408|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302465|TTC21A|199223|tetratricopeptide repeat domain 21A##BC127119|XIRP1|165904|xin actin-binding repeat containing 1##BC139782|XIRP1|165904|xin actin-binding repeat containing 1##AY375160|XIRP1|165904|xin actin-binding repeat containing 1##NM_194293|XIRP1|165904|xin actin-binding repeat containing 1##AJ626899|XIRP1|165904|xin actin-binding repeat containing 1##AJ626900|XIRP1|165904|xin actin-binding repeat containing 1##NM_001198621|XIRP1|165904|xin actin-binding repeat containing 1##AK096421|XIRP1|165904|xin actin-binding repeat containing 1##BX648565|XIRP1|165904|xin actin-binding repeat containing 1##CR749430|XIRP1|165904|xin actin-binding repeat containing 1##U28934|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC028078|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##U20350|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK307911|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK312373|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK225764|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC017855|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001337|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171172|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1	0.0	
chr4	185276396	185276560	reg1025318.p1	4.658	+	BC035035 AY358676 AK057370 NM_153343	-137413	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-448567	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-448658	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	119203	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	294123	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	294355	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr4	185455771	185455919	reg1028478.p1	4.658	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	-60164	-	BC035035 AY358676 AK057370 NM_153343	-316780	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-627934	+	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	114756	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	114988	+	TSC_hg19_v1_chr4_+_185570923 BC064600 AK307317	115084	+	X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111##BC064600|CCDC111|201973|coiled-coil domain containing 111##AK307317|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr5	73691064	73691204	reg1032765.p2	4.658	+	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	-581784	+	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	-769149	+	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	-829552	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	245329	-	AK096578 NM_003633	246114	-	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	289874	+	AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)	0.984559	CTCF.p2:-6:0.985
chr7	156715905	156716075	reg1026821.p1	4.658	+	TSC_hg19_v1_chr7_-_156685878 NM_022458	-30074	-	TSC_hg19_v1_chr7_-_156685868 AL834394 AB463099 AM392621 AM393143 AM393254 AM393828 CU676016 AF402318 BC017663 BC063649 AF107454 AK021727 AK291037 AK299753	-30243	-	TSC_hg19_v1_chr7_-_156468370 CU688401	-247568	-	TSC_hg19_v1_chr7_+_156742419 AY576779 NM_138400	26425	+	TSC_hg19_v1_chr7_+_156798463 AY927456 AY927462 AY927463 AY927458	82510	+	AY927459 AY927461 TSC_hg19_v1_chr7_-_156802024 AY927460 AY927464 NM_001165255	86064	-	NM_022458|LMBR1|64327|limb region 1 homolog (mouse)##AL834394|LMBR1|64327|limb region 1 homolog (mouse)##AM392621|LMBR1|64327|limb region 1 homolog (mouse)##AM393143|LMBR1|64327|limb region 1 homolog (mouse)##AM393254|LMBR1|64327|limb region 1 homolog (mouse)##AM393828|LMBR1|64327|limb region 1 homolog (mouse)##AF402318|LMBR1|64327|limb region 1 homolog (mouse)##BC017663|LMBR1|64327|limb region 1 homolog (mouse)##BC063649|LMBR1|64327|limb region 1 homolog (mouse)##AK021727|LMBR1|64327|limb region 1 homolog (mouse)##AK291037|LMBR1|64327|limb region 1 homolog (mouse)##AK299753|LMBR1|64327|limb region 1 homolog (mouse)##AY576779|NOM1|64434|nucleolar protein with MIF4G domain 1##NM_138400|NOM1|64434|nucleolar protein with MIF4G domain 1##AY927462|MNX1|3110|motor neuron and pancreas homeobox 1##AY927459|MNX1|3110|motor neuron and pancreas homeobox 1##AY927461|MNX1|3110|motor neuron and pancreas homeobox 1##AY927460|MNX1|3110|motor neuron and pancreas homeobox 1##AY927464|MNX1|3110|motor neuron and pancreas homeobox 1##NM_001165255|MNX1|3110|motor neuron and pancreas homeobox 1	0.0	
chr7	21466047	21466113	reg1027895.p1	4.658	+	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	-639546	-	TSC_hg19_v1_chr7_-_20826429 AK299947	-639652	-	TSC_hg19_v1_chr7_-_20825382 AB464710	-640698	-	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	1739	+	AB591008 TSC_hg19_v1_chr7_+_21468356	2244	+	AJ320497 NM_003777	116752	+	AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor##AK299947|SP8|221833|Sp8 transcription factor##AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11	0.0	
chrX	149106662	149106776	reg1026745.p2	4.658	+	L43575 TSC_hg19_v1_chrX_-_149106661 U66042 NM_001013845	-37	-	AK313943 NM_001166400 NM_001166401 NM_005364 BC002455 BC012744	-96749	+	AK292272 AK313321 NM_001080790 BC002351 NM_005365	-243124	+	TSC_hg19_v1_chrX_+_149529838 AK302612	423114	+	TSC_hg19_v1_chrX_+_149531583 NM_001177465 AK294478	424843	+	NM_001177466 NM_005491 U46023 BC136324 AB527434 AK315217	507063	+	L43575|CXorf40B|541578|chromosome X open reading frame 40B##U66042|CXorf40B|541578|chromosome X open reading frame 40B##NM_001013845|CXorf40B|541578|chromosome X open reading frame 40B##AK313943|MAGEA8|4107|melanoma antigen family A, 8##NM_001166400|MAGEA8|4107|melanoma antigen family A, 8##NM_001166401|MAGEA8|4107|melanoma antigen family A, 8##NM_005364|MAGEA8|4107|melanoma antigen family A, 8##BC002455|MAGEA8|4107|melanoma antigen family A, 8##BC012744|MAGEA8|4107|melanoma antigen family A, 8##AK292272|MAGEA9|4108|melanoma antigen family A, 9##AK313321|MAGEA9|4108|melanoma antigen family A, 9##NM_001080790|MAGEA9B|728269|melanoma antigen family A, 9B##BC002351|MAGEA9|4108|melanoma antigen family A, 9##NM_005365|MAGEA9|4108|melanoma antigen family A, 9##AK302612|MAMLD1|10046|mastermind-like domain containing 1##NM_001177465|MAMLD1|10046|mastermind-like domain containing 1##AK294478|MAMLD1|10046|mastermind-like domain containing 1##NM_001177466|MAMLD1|10046|mastermind-like domain containing 1##NM_005491|MAMLD1|10046|mastermind-like domain containing 1##U46023|MAMLD1|10046|mastermind-like domain containing 1##BC136324|MAMLD1|10046|mastermind-like domain containing 1##AK315217|MAMLD1|10046|mastermind-like domain containing 1	0.0	
chr17	2611043	2611148	reg1027890.p1	4.657	+	TSC_hg19_v1_chr17_+_2497263 BX538346 AK313078 L13385 BC064638	-113837	+	TSC_hg19_v1_chr17_+_2496944 NM_000430 L13386	-114125	+	TSC_hg19_v1_chr17_-_2415189 BX647255 AK294547 BC050603 BC001213 AL832612 AK027410 AK296464 NM_024086	-195950	-	NM_015229 TSC_hg19_v1_chr17_-_2615039	3892	-	AK124640 TSC_hg19_v1_chr17_+_2680496	69328	+	AJ628446 AJ628447 NM_001100398 NM_015085 TSC_hg19_v1_chr17_+_2699761 CR627427 BC140870 BC140871	88658	+	BX538346|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##AK313078|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13385|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BC064638|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##NM_000430|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13386|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BX647255|METTL16|79066|methyltransferase like 16##AK294547|METTL16|79066|methyltransferase like 16##BC050603|METTL16|79066|methyltransferase like 16##BC001213|METTL16|79066|methyltransferase like 16##AL832612|METTL16|79066|methyltransferase like 16##AK027410|METTL16|79066|methyltransferase like 16##AK296464|METTL16|79066|methyltransferase like 16##NM_024086|METTL16|79066|methyltransferase like 16##NM_015229|KIAA0664|23277|KIAA0664##AK124640|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AJ628446|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AJ628447|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_001100398|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015085|RAP1GAP2|23108|RAP1 GTPase activating protein 2##CR627427|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140870|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140871|RAP1GAP2|23108|RAP1 GTPase activating protein 2	1.09647	CTCF.p2:34:0.998
chr2	20981587	20981683	reg1023910.p1	4.657	+	AF522369 NM_182828	-115212	+	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	-130787	-	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-334803	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	41218	-	M36676 TSC_hg19_v1_chr2_-_21225654 M31030	244058	-	TSC_hg19_v1_chr2_-_21228195 X03325	246613	-	AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43##M36676|APOB|338|apolipoprotein B (including Ag(x) antigen)##M31030|APOB|338|apolipoprotein B (including Ag(x) antigen)##X03325|APOB|338|apolipoprotein B (including Ag(x) antigen)	0.99218	CTCF.p2:-11:0.992
chr8	26240351	26240504	reg1030058.p2	4.657	+	AK303981 NM_001177591	-89696	+	TSC_hg19_v1_chr8_+_26149092 M64929 AY189686	-91233	+	AK314823 TSC_hg19_v1_chr8_+_26149043 BC041071	-91378	+	NM_004331 TSC_hg19_v1_chr8_+_26240583 AF452712 AK300286 AL132665 BC009603 AF067396 AF079221 AF060922 AK307195 AK300727 AF536326 AB004788 AK290213 BC001559 AB527613 BT019500 BT019501 CR456701 EU831983 EU832076	157	+	BC047515 TSC_hg19_v1_chr8_-_26371389 BC036489 AK055325 NM_007257	131007	-	TSC_hg19_v1_chr8_+_26371546 AK092377 NM_001197293 AB370195	131201	+	AK303981|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##NM_001177591|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##M64929|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AY189686|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AK314823|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##BC041071|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC047515|PNMA2|10687|paraneoplastic antigen MA2##BC036489|PNMA2|10687|paraneoplastic antigen MA2##AK055325|PNMA2|10687|paraneoplastic antigen MA2##NM_007257|PNMA2|10687|paraneoplastic antigen MA2##AK092377|DPYSL2|1808|dihydropyrimidinase-like 2##NM_001197293|DPYSL2|1808|dihydropyrimidinase-like 2##AB370195|DPYSL2|1808|dihydropyrimidinase-like 2	0.0	
chr12	117141273	117141454	reg1003712.p2	4.656	+	NM_001085481	-144178	+	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	-170134	+	TSC_hg19_v1_chr12_-_116715263 AY338463	-426203	-	TSC_hg19_v1_chr12_-_117175822 AK309652 BC019843 AK025068 NM_024738	34375	-	TSC_hg19_v1_chr12_-_117175868 AK222983 AK298857	34506	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	34756	+	NM_001085481|MAP1LC3B2|643246|microtubule-associated protein 1 light chain 3 beta 2##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173##AY338463|MED13L|23389|mediator complex subunit 13-like##AK309652|C12orf49|79794|chromosome 12 open reading frame 49##BC019843|C12orf49|79794|chromosome 12 open reading frame 49##AK025068|C12orf49|79794|chromosome 12 open reading frame 49##NM_024738|C12orf49|79794|chromosome 12 open reading frame 49##AK222983|C12orf49|79794|chromosome 12 open reading frame 49##AK298857|C12orf49|79794|chromosome 12 open reading frame 49##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2	0.0	
chr12	131310956	131311067	reg1031152.p1	4.656	+	TSC_hg19_v1_chr12_-_131200818 BC007632	-110186	-	AB002316 NM_015347	-308602	-	TSC_hg19_v1_chr12_+_130822635 BC028581 AF387507 AF104260 AK093133 AX747944	-488389	+	TSC_hg19_v1_chr12_-_131323796 D14582 BC047496 NM_001980 NM_194356	12742	-	TSC_hg19_v1_chr12_+_131356615 AF054183 AK311223 AK316193 AK312466 BC000852 NM_006325	45575	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	45614	+	BC007632|RIMBP2|23504|RIMS binding protein 2##AB002316|RIMBP2|23504|RIMS binding protein 2##NM_015347|RIMBP2|23504|RIMS binding protein 2##BC028581|PIWIL1|9271|piwi-like 1 (Drosophila)##AF387507|PIWIL1|9271|piwi-like 1 (Drosophila)##AF104260|PIWIL1|9271|piwi-like 1 (Drosophila)##AK093133|PIWIL1|9271|piwi-like 1 (Drosophila)##D14582|STX2|2054|syntaxin 2##BC047496|STX2|2054|syntaxin 2##NM_001980|STX2|2054|syntaxin 2##NM_194356|STX2|2054|syntaxin 2##AF054183|RAN|5901|RAN, member RAS oncogene family##AK316193|RAN|5901|RAN, member RAS oncogene family##AK312466|RAN|5901|RAN, member RAS oncogene family##BC000852|RAN|5901|RAN, member RAS oncogene family##NM_006325|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family	0.998892	CTCF.p2:0:0.999
chr12	6776815	6776925	reg1025179.p1	4.656	+	BC013038 TSC_hg19_v1_chr12_-_6772286 AB197695 AB197696 AB197697 AB463779 EF152349 EF152350 EF152351 EF152352 BC007781 BC095434 AK313621 AF110645 AF156552 AF063594 AK293169 AK303354 NM_001127582 NM_001127583 NM_001127584 NM_001127585 NM_001127586 NM_016162	-4564	-	AK312782 TSC_hg19_v1_chr12_-_6756599	-20260	-	DQ890872 DQ894028 TSC_hg19_v1_chr12_-_6756578 AK302290 AK311572 BC033010 AB051833 NM_032489	-20306	-	TSC_hg19_v1_chr12_-_6798471 AK095734	21597	-	TSC_hg19_v1_chr12_-_6798532 NM_133476	21672	-	BC053361 AK298962 TSC_hg19_v1_chr12_-_6798677 NM_001039920 NM_001135734	21808	-	BC013038|ING4|51147|inhibitor of growth family, member 4##AB197695|ING4|51147|inhibitor of growth family, member 4##AB197696|ING4|51147|inhibitor of growth family, member 4##AB197697|ING4|51147|inhibitor of growth family, member 4##EF152349|ING4|51147|inhibitor of growth family, member 4##EF152350|ING4|51147|inhibitor of growth family, member 4##EF152351|ING4|51147|inhibitor of growth family, member 4##EF152352|ING4|51147|inhibitor of growth family, member 4##BC007781|ING4|51147|inhibitor of growth family, member 4##BC095434|ING4|51147|inhibitor of growth family, member 4##AK313621|ING4|51147|inhibitor of growth family, member 4##AF110645|ING4|51147|inhibitor of growth family, member 4##AF156552|ING4|51147|inhibitor of growth family, member 4##AF063594|ING4|51147|inhibitor of growth family, member 4##AK293169|ING4|51147|inhibitor of growth family, member 4##AK303354|ING4|51147|inhibitor of growth family, member 4##NM_001127582|ING4|51147|inhibitor of growth family, member 4##NM_001127583|ING4|51147|inhibitor of growth family, member 4##NM_001127584|ING4|51147|inhibitor of growth family, member 4##NM_001127585|ING4|51147|inhibitor of growth family, member 4##NM_001127586|ING4|51147|inhibitor of growth family, member 4##NM_016162|ING4|51147|inhibitor of growth family, member 4##AK312782|ACRBP|84519|acrosin binding protein##DQ890872|ACRBP|84519|acrosin binding protein##DQ894028|ACRBP|84519|acrosin binding protein##AK302290|ACRBP|84519|acrosin binding protein##AK311572|ACRBP|84519|acrosin binding protein##BC033010|ACRBP|84519|acrosin binding protein##AB051833|ACRBP|84519|acrosin binding protein##NM_032489|ACRBP|84519|acrosin binding protein##AK095734|ZNF384|171017|zinc finger protein 384##NM_133476|ZNF384|171017|zinc finger protein 384##BC053361|ZNF384|171017|zinc finger protein 384##AK298962|ZNF384|171017|zinc finger protein 384##NM_001039920|ZNF384|171017|zinc finger protein 384##NM_001135734|ZNF384|171017|zinc finger protein 384	0.910357	CTCF.p2:-6:0.910
chr15	48799800	48799907	reg1028103.p1	4.656	+	TSC_hg19_v1_chr15_+_48624363 AK291515 NM_001948 AK312122 U31930 U62891 L11877 AB049113 M89913 DQ891191 DQ894375 CR541720 CR541781	-175452	+	TSC_hg19_v1_chr15_+_48623625 NM_001025248 NM_001025249 AK000629 BC070339 BC110377 AK298464 U90223 AB528727	-176189	+	NM_000338 NM_001184832 AK129998 AK298312 BC020860	-301356	+	TSC_hg19_v1_chr15_-_48937070 L13923	137230	-	TSC_hg19_v1_chr15_-_48937907 BC146854 AK304737 BC094721 NM_000138 X63556	138076	-	BC117182 TSC_hg19_v1_chr15_-_49103277 AB020719 BC069186 AK303805 BX648822 BC107721 NM_001194998 NM_014985	303409	-	AK291515|DUT|1854|deoxyuridine triphosphatase##NM_001948|DUT|1854|deoxyuridine triphosphatase##AK312122|DUT|1854|deoxyuridine triphosphatase##U31930|DUT|1854|deoxyuridine triphosphatase##U62891|DUT|1854|deoxyuridine triphosphatase##L11877|DUT|1854|deoxyuridine triphosphatase##AB049113|DUT|1854|deoxyuridine triphosphatase##M89913|DUT|1854|deoxyuridine triphosphatase##DQ891191|DUT|1854|deoxyuridine triphosphatase##DQ894375|DUT|1854|deoxyuridine triphosphatase##CR541720|DUT|1854|deoxyuridine triphosphatase##CR541781|DUT|1854|deoxyuridine triphosphatase##NM_001025248|DUT|1854|deoxyuridine triphosphatase##NM_001025249|DUT|1854|deoxyuridine triphosphatase##AK000629|DUT|1854|deoxyuridine triphosphatase##BC070339|DUT|1854|deoxyuridine triphosphatase##BC110377|DUT|1854|deoxyuridine triphosphatase##AK298464|DUT|1854|deoxyuridine triphosphatase##U90223|DUT|1854|deoxyuridine triphosphatase##NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##L13923|FBN1|2200|fibrillin 1##BC146854|FBN1|2200|fibrillin 1##AK304737|FBN1|2200|fibrillin 1##BC094721|FBN1|2200|fibrillin 1##NM_000138|FBN1|2200|fibrillin 1##X63556|FBN1|2200|fibrillin 1##BC117182|CEP152|22995|centrosomal protein 152kDa##AB020719|CEP152|22995|centrosomal protein 152kDa##BC069186|CEP152|22995|centrosomal protein 152kDa##AK303805|CEP152|22995|centrosomal protein 152kDa##BX648822|CEP152|22995|centrosomal protein 152kDa##BC107721|CEP152|22995|centrosomal protein 152kDa##NM_001194998|CEP152|22995|centrosomal protein 152kDa##NM_014985|CEP152|22995|centrosomal protein 152kDa	0.0	
chr18	3245895	3246075	reg1004551.p1	4.656	+	TSC_hg19_v1_chr18_-_3219987 AJ621424 AK125322 NM_003803 NM_019856	-25940	-	BC116183 BC116184 TSC_hg19_v1_chr18_-_3219875	-26125	-	BC152448 D87436 NM_014646	-234041	-	BC031972 NM_006471	1542	+	TSC_hg19_v1_chr18_+_3247798 DQ185044	1808	+	TSC_hg19_v1_chr18_+_3247815 X54304	1830	+	AJ621424|MYOM1|8736|myomesin 1, 185kDa##AK125322|MYOM1|8736|myomesin 1, 185kDa##NM_003803|MYOM1|8736|myomesin 1, 185kDa##NM_019856|MYOM1|8736|myomesin 1, 185kDa##BC116183|MYOM1|8736|myomesin 1, 185kDa##BC116184|MYOM1|8736|myomesin 1, 185kDa##BC152448|LPIN2|9663|lipin 2##D87436|LPIN2|9663|lipin 2##NM_014646|LPIN2|9663|lipin 2##BC031972|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric##NM_006471|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric##DQ185044|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric##X54304|MYL12A|10627|myosin, light chain 12A, regulatory, non-sarcomeric	0.0	
chr10	116639435	116639530	reg1028162.p1	4.655	+	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	-57933	+	TSC_hg19_v1_chr10_-_116528049 AK057834	-111474	-	TSC_hg19_v1_chr10_-_116444374 NM_001003407 NM_001003408	-195089	-	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	58481	+	TSC_hg19_v1_chr10_+_116853123 BC029592 BC035157 NM_207303 BC139916 BC139923 BC047716	213666	+	AB590245 DQ892210 DQ895406 AF042080 U95847 U97144 BC014962 NM_145793	1392198	-	BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##AK057834|ABLIM1|3983|actin binding LIM protein 1##NM_001003407|ABLIM1|3983|actin binding LIM protein 1##NM_001003408|ABLIM1|3983|actin binding LIM protein 1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC029592|ATRNL1|26033|attractin-like 1##BC035157|ATRNL1|26033|attractin-like 1##NM_207303|ATRNL1|26033|attractin-like 1##BC139916|ATRNL1|26033|attractin-like 1##BC139923|ATRNL1|26033|attractin-like 1##BC047716|ATRNL1|26033|attractin-like 1##DQ892210|GFRA1|2674|GDNF family receptor alpha 1##DQ895406|GFRA1|2674|GDNF family receptor alpha 1##AF042080|GFRA1|2674|GDNF family receptor alpha 1##U95847|GFRA1|2674|GDNF family receptor alpha 1##U97144|GFRA1|2674|GDNF family receptor alpha 1##BC014962|GFRA1|2674|GDNF family receptor alpha 1##NM_145793|GFRA1|2674|GDNF family receptor alpha 1	0.527768	CTCF.p2:33:0.528
chr1	205294495	205294632	reg1001158.p1	4.655	+	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	-3720	-	AY358192 TSC_hg19_v1_chr1_+_205236667	-57929	+	AK293734 NM_001242925	-96505	+	BC036076 TSC_hg19_v1_chr1_-_205313311	18747	-	AK299227 AK001610 NM_018203 AK096590	31477	-	AB084764 AB084765 AB085610 AB096677 AB096678 AB096679 AB096680 AB096681 AB096682 BC036636 AK302392 NM_001001552 NM_001199050 NM_001199051 NM_001199052	96633	-	AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK293734|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_001242925|TMCC2|9911|transmembrane and coiled-coil domain family 2##BC036076|KLHDC8A|55220|kelch domain containing 8A##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A##AB084764|LEMD1|93273|LEM domain containing 1##AB084765|LEMD1|93273|LEM domain containing 1##AB085610|LEMD1|93273|LEM domain containing 1##AB096677|LEMD1|93273|LEM domain containing 1##AB096678|LEMD1|93273|LEM domain containing 1##AB096679|LEMD1|93273|LEM domain containing 1##AB096680|LEMD1|93273|LEM domain containing 1##AB096681|LEMD1|93273|LEM domain containing 1##AB096682|LEMD1|93273|LEM domain containing 1##BC036636|LEMD1|93273|LEM domain containing 1##AK302392|LEMD1|93273|LEM domain containing 1##NM_001001552|LEMD1|93273|LEM domain containing 1##NM_001199050|LEMD1|93273|LEM domain containing 1##NM_001199051|LEMD1|93273|LEM domain containing 1##NM_001199052|LEMD1|93273|LEM domain containing 1	0.0	
chr1	226926013	226926193	reg1026124.p4	4.655	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-189486	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-189602	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-330300	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	835	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	132177	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	201843	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.0	
chr16	89489328	89489508	reg1023778.p2	4.655	+	AK293862 NM_001242885	-101878	+	BC041585 TSC_hg19_v1_chr16_-_89351073	-138462	-	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	-139344	-	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	67513	-	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	85396	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	137647	+	AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC041585|ANKRD11|29123|ankyrin repeat domain 11##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13	0.0	
chr7	134677749	134677902	reg1025960.p2	4.655	+	TSC_hg19_v1_chr7_+_134671258 AK302827 NM_178563 BC030651 AL832281 AK023045 AK311252	-6540	+	BC014035 TSC_hg19_v1_chr7_+_134576197 BC061926 BC005006 D90452 D90453	-101552	+	NM_033139 NM_033140 TSC_hg19_v1_chr7_+_134576161	-101670	+	NM_018295 TSC_hg19_v1_chr7_+_134832838 AK001862 AK225055 AK301268 BC020942	155022	+	NM_001243753 NM_001243755	176400	-	TSC_hg19_v1_chr7_-_134855252 NM_001243752	177442	-	AK302827|AGBL3|340351|ATP/GTP binding protein-like 3##NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3##BC030651|AGBL3|340351|ATP/GTP binding protein-like 3##AL832281|AGBL3|340351|ATP/GTP binding protein-like 3##AK023045|AGBL3|340351|ATP/GTP binding protein-like 3##BC014035|CALD1|800|caldesmon 1##BC061926|CALD1|800|caldesmon 1##BC005006|CALD1|800|caldesmon 1##D90452|CALD1|800|caldesmon 1##D90453|CALD1|800|caldesmon 1##NM_033139|CALD1|800|caldesmon 1##NM_033140|CALD1|800|caldesmon 1##NM_018295|TMEM140|55281|transmembrane protein 140##AK001862|TMEM140|55281|transmembrane protein 140##AK225055|TMEM140|55281|transmembrane protein 140##AK301268|TMEM140|55281|transmembrane protein 140##BC020942|TMEM140|55281|transmembrane protein 140##NM_001243753|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243755|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243752|C7orf49|78996|chromosome 7 open reading frame 49	0.0	
chr8	101455448	101455605	reg1032209.p2	4.655	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-133241	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-133345	-	AB271913 AB271914 AB029316 NM_015435	-140055	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	116414	-	AK093906 AX748361 NM_152628	206366	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	278280	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr9	74590883	74591011	reg1030473.p1	4.655	+	TSC_hg19_v1_chr9_+_74526557 AK311206 BC028019 BC052375 AK307186 CU690912	-64359	+	TSC_hg19_v1_chr9_+_74526393 NM_182505 BC010179	-64546	+	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	-64791	-	BC044620 BC053956 BC036255 NM_001128618	84562	-	AK300418 NM_001242507	138563	+	NM_001242505 NM_001242506 NM_004293 TSC_hg19_v1_chr9_+_74764283 BC053584	173332	+	AK311206|C9orf85|138241|chromosome 9 open reading frame 85##BC028019|C9orf85|138241|chromosome 9 open reading frame 85##BC052375|C9orf85|138241|chromosome 9 open reading frame 85##AK307186|C9orf85|138241|chromosome 9 open reading frame 85##NM_182505|C9orf85|138241|chromosome 9 open reading frame 85##BC010179|C9orf85|138241|chromosome 9 open reading frame 85##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1##BC044620|C9orf57|138240|chromosome 9 open reading frame 57##BC053956|C9orf57|138240|chromosome 9 open reading frame 57##BC036255|C9orf57|138240|chromosome 9 open reading frame 57##NM_001128618|C9orf57|138240|chromosome 9 open reading frame 57##AK300418|GDA|9615|guanine deaminase##NM_001242507|GDA|9615|guanine deaminase##NM_001242505|GDA|9615|guanine deaminase##NM_001242506|GDA|9615|guanine deaminase##NM_004293|GDA|9615|guanine deaminase##BC053584|GDA|9615|guanine deaminase	0.0	
chr10	103255239	103255356	reg1031497.p1	4.654	+	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	-141425	+	BC136321 BC069156 NM_006562 X90828	-266595	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-364119	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	92632	-	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	92712	-	TSC_hg19_v1_chr10_+_103348081 BC031695 BC001082 NM_015448 AK290154 AB527777 EU832466 EU832547 AY532267	92773	+	NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda##BC031695|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##BC001082|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##NM_015448|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AK290154|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832466|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832547|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AY532267|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)	0.0	
chr11	60683086	60683200	reg1026390.p1	4.654	+	TSC_hg19_v1_chr11_+_60681647 AX775851 BC001309 AX775849	-1475	+	NM_024092 AK303961 TSC_hg19_v1_chr11_+_60681578 AK313913	-1664	+	TSC_hg19_v1_chr11_-_60674060 AJ131186 BC008719 BC018665 BC018698 NM_014502	-9092	-	TSC_hg19_v1_chr11_+_60691945 NM_017870 NM_178031 AK000546 BC114569 BC032059	8792	+	BC037974 BC025710 AF135600 AB020598 NM_016582	36043	-	NM_006725 TSC_hg19_v1_chr11_+_60739236 AK128419 AK312749 BC078669 BC033755 X60992 AK292704 DQ786329 DQ786330 U66142 U66145 U66146	56082	+	AX775851|TMEM109|79073|transmembrane protein 109##BC001309|TMEM109|79073|transmembrane protein 109##AX775849|TMEM109|79073|transmembrane protein 109##NM_024092|TMEM109|79073|transmembrane protein 109##AK303961|TMEM109|79073|transmembrane protein 109##AK313913|TMEM109|79073|transmembrane protein 109##AJ131186|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC008719|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC018665|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC018698|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##NM_014502|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##NM_017870|TMEM132A|54972|transmembrane protein 132A##NM_178031|TMEM132A|54972|transmembrane protein 132A##AK000546|TMEM132A|54972|transmembrane protein 132A##BC114569|TMEM132A|54972|transmembrane protein 132A##BC032059|TMEM132A|54972|transmembrane protein 132A##BC037974|SLC15A3|51296|solute carrier family 15, member 3##BC025710|SLC15A3|51296|solute carrier family 15, member 3##AF135600|SLC15A3|51296|solute carrier family 15, member 3##AB020598|SLC15A3|51296|solute carrier family 15, member 3##NM_016582|SLC15A3|51296|solute carrier family 15, member 3##NM_006725|CD6|923|CD6 molecule##AK128419|CD6|923|CD6 molecule##AK312749|CD6|923|CD6 molecule##BC078669|CD6|923|CD6 molecule##BC033755|CD6|923|CD6 molecule##X60992|CD6|923|CD6 molecule##AK292704|CD6|923|CD6 molecule##DQ786329|CD6|923|CD6 molecule##DQ786330|CD6|923|CD6 molecule##U66142|CD6|923|CD6 molecule##U66145|CD6|923|CD6 molecule##U66146|CD6|923|CD6 molecule	1.613525	CTCF.p2:9:0.879	CTCF.p2:-21:0.735
chr13	26707016	26707155	reg1033040.p1	4.654	+	BC132898 BC137092 AY358775 NM_001007538	-81905	-	AK302980 TSC_hg19_v1_chr13_+_26042965	-664120	+	TSC_hg19_v1_chr13_+_26042926 AK126031	-664156	+	AL133621 TSC_hg19_v1_chr13_-_26789203	82050	-	TSC_hg19_v1_chr13_-_26795853 AY009109 NM_183044	88772	-	BC034688 TSC_hg19_v1_chr13_-_26795942 AK293272 AJ010347 NM_183043	88892	-	BC132898|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##BC137092|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AY358775|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##NM_001007538|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AK302980|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK126031|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AL133621|RNF6|6049|ring finger protein (C3H2C3 type) 6##AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6##BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6##AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6##AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6	0.032624	
chr16	70504890	70504996	reg1032303.p1	4.654	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	-2103	+	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	-16444	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	-31962	-	BC027726 AB088369 BC128144 BC128145 AK022874 BC072438 TSC_hg19_v1_chr16_-_70557452 BX648010 AK293235 AK297557 AK096557 NM_001195139 NM_015386	52501	-	TSC_hg19_v1_chr16_+_70557713 NM_012426 AK291768	52757	+	BC009780 TSC_hg19_v1_chr16_+_70557724	52781	+	AK096727|FUK|197258|fucokinase##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##BC027726|COG4|25839|component of oligomeric golgi complex 4##AB088369|COG4|25839|component of oligomeric golgi complex 4##BC128144|COG4|25839|component of oligomeric golgi complex 4##BC128145|COG4|25839|component of oligomeric golgi complex 4##AK022874|COG4|25839|component of oligomeric golgi complex 4##BC072438|COG4|25839|component of oligomeric golgi complex 4##BX648010|COG4|25839|component of oligomeric golgi complex 4##AK293235|COG4|25839|component of oligomeric golgi complex 4##AK297557|COG4|25839|component of oligomeric golgi complex 4##AK096557|COG4|25839|component of oligomeric golgi complex 4##NM_001195139|COG4|25839|component of oligomeric golgi complex 4##NM_015386|COG4|25839|component of oligomeric golgi complex 4##NM_012426|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##AK291768|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##BC009780|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa	0.993527	CTCF.p2:28:0.994
chr16	89086873	89087005	reg1027917.p2	4.654	+	AB527670 EU446890 BC047019 AK314766 AB010419 BC062624 NM_005187 TSC_hg19_v1_chr16_-_89043569	-43536	-	AB010420 NM_175931	-79333	-	AB528852 EU190484 BC130001 BC130002 NM_001080487	-153898	-	TSC_hg19_v1_chr16_-_89119364 AK055272	32430	-	NM_001127214 NM_001243279 NM_174917 TSC_hg19_v1_chr16_+_89160259	73298	+	TSC_hg19_v1_chr16_+_89160285 BC028399 AK290963 BC064609 BC072391 AK075499	73368	+	EU446890|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC047019|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AK314766|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010419|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC062624|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_005187|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##EU190484|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130001|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130002|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001080487|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001127214|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001243279|ACSF3|197322|acyl-CoA synthetase family member 3##NM_174917|ACSF3|197322|acyl-CoA synthetase family member 3##BC028399|ACSF3|197322|acyl-CoA synthetase family member 3##AK290963|ACSF3|197322|acyl-CoA synthetase family member 3##BC064609|ACSF3|197322|acyl-CoA synthetase family member 3##BC072391|ACSF3|197322|acyl-CoA synthetase family member 3##AK075499|ACSF3|197322|acyl-CoA synthetase family member 3	0.0	
chr20	57978890	57979007	reg1025958.p2	4.654	+	TSC_hg19_v1_chr20_+_57875665 J05081 X52001 AB590897 CU679163 BT007085 DQ096281	-103191	+	BC008876 TSC_hg19_v1_chr20_+_57875490 BC053866 NM_000114 NM_207032 NM_207033 NM_207034	-103459	+	NM_178457	-212874	+	AK098788 NM_001199505	173615	+	BC108303 AJ311122 NM_080672 TSC_hg19_v1_chr20_+_58179660 BC117362 BC117364	200706	+	AJ617581 NM_001199506 AK316047	272768	+	J05081|EDN3|1908|endothelin 3##X52001|EDN3|1908|endothelin 3##BT007085|EDN3|1908|endothelin 3##DQ096281|EDN3|1908|endothelin 3##BC008876|EDN3|1908|endothelin 3##BC053866|EDN3|1908|endothelin 3##NM_000114|EDN3|1908|endothelin 3##NM_207032|EDN3|1908|endothelin 3##NM_207033|EDN3|1908|endothelin 3##NM_207034|EDN3|1908|endothelin 3##NM_178457|ZNF831|128611|zinc finger protein 831##AK098788|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199505|PHACTR3|116154|phosphatase and actin regulator 3##BC108303|PHACTR3|116154|phosphatase and actin regulator 3##AJ311122|PHACTR3|116154|phosphatase and actin regulator 3##NM_080672|PHACTR3|116154|phosphatase and actin regulator 3##BC117362|PHACTR3|116154|phosphatase and actin regulator 3##BC117364|PHACTR3|116154|phosphatase and actin regulator 3##AJ617581|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199506|PHACTR3|116154|phosphatase and actin regulator 3##AK316047|PHACTR3|116154|phosphatase and actin regulator 3	0.316794	CTCF.p2:-1:0.317
chr14	87369985	87370095	reg1030617.p1	4.653	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-1370455	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-1373499	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-1373567	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	1089423	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	1089519	-	NM_001201402	1089968	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	0.999897	CTCF.p2:-6:1.000
chr17	42423186	42423337	reg1029924.p1	4.653	+	TSC_hg19_v1_chr17_+_42422669 AK000607 AK222522 AK296090 X62320 AK303830	-585	+	TSC_hg19_v1_chr17_+_42422640 AF055008	-624	+	BC000324 NM_002087 TSC_hg19_v1_chr17_+_42422623	-705	+	TSC_hg19_v1_chr17_-_42441222 BC030200 NM_198475	17961	-	AB528003 J02764 BC117443 BC126442 AK297155 AK315335 M34480 NM_000419	43595	-	TSC_hg19_v1_chr17_-_42580760 BC136629 BC144323 AK025600 BC140010	157503	-	AK000607|GRN|2896|granulin##AK222522|GRN|2896|granulin##AK296090|GRN|2896|granulin##X62320|GRN|2896|granulin##AK303830|GRN|2896|granulin##AF055008|GRN|2896|granulin##BC000324|GRN|2896|granulin##NM_002087|GRN|2896|granulin##BC030200|FAM171A2|284069|family with sequence similarity 171, member A2##NM_198475|FAM171A2|284069|family with sequence similarity 171, member A2##J02764|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC117443|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC126442|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK297155|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK315335|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##M34480|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##NM_000419|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC136629|GPATCH8|23131|G patch domain containing 8##BC144323|GPATCH8|23131|G patch domain containing 8##AK025600|GPATCH8|23131|G patch domain containing 8##BC140010|GPATCH8|23131|G patch domain containing 8	0.998566	CTCF.p2:31:0.999
chr18	43430042	43430189	reg1026959.p1	4.653	+	AK172835 NM_213602 AY971516 AK290402 AK290400 AK095432	-24491	+	NM_001146037	-123198	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	-125958	+	AB046852 TSC_hg19_v1_chr18_-_43547294 NM_020964	117163	-	DQ893199 DQ893200 DQ893201 DQ893695 DQ896527 DQ896528 DQ896529 TSC_hg19_v1_chr18_-_43652247 BC035395 BC008216 NM_024430	222093	-	TSC_hg19_v1_chr18_-_43668143 AK129804	238062	-	AK172835|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_213602|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AY971516|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290402|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290400|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK095432|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AB046852|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##NM_020964|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##DQ893199|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893200|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893201|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893695|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896527|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896528|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896529|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##BC035395|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##NM_024430|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##AK129804|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	0.0	
chr5	134355170	134355303	reg1031574.p2	4.653	+	BC110384 NM_178019 AK292427 AF432876 BC101692	-51621	+	TSC_hg19_v1_chr5_+_134240837 EU832290 EU832374 AK098495 AF499009	-114376	+	TSC_hg19_v1_chr5_+_134240808 BC054021 AL136721 NM_032151	-114451	+	CU679351 AB463996 EU446647 TSC_hg19_v1_chr5_-_134369629 U70370	14389	-	TSC_hg19_v1_chr5_-_134369891 BC009412 AK290635 NM_002653	14673	-	TSC_hg19_v1_chr5_-_134734798 AF041483	379578	-	BC110384|CATSPER3|347732|cation channel, sperm associated 3##NM_178019|CATSPER3|347732|cation channel, sperm associated 3##AK292427|CATSPER3|347732|cation channel, sperm associated 3##AF432876|CATSPER3|347732|cation channel, sperm associated 3##BC101692|CATSPER3|347732|cation channel, sperm associated 3##EU832290|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##EU832374|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AK098495|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AF499009|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##BC054021|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##AL136721|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##NM_032151|PCBD2|84105|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2##EU446647|PITX1|5307|paired-like homeodomain 1##U70370|PITX1|5307|paired-like homeodomain 1##BC009412|PITX1|5307|paired-like homeodomain 1##AK290635|PITX1|5307|paired-like homeodomain 1##NM_002653|PITX1|5307|paired-like homeodomain 1##AF041483|H2AFY|9555|H2A histone family, member Y	0.0	
chr5	142609323	142609417	reg1016182.p1	4.653	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-459062	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-459398	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-531799	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	173453	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	173736	-	BC015610 TSC_hg19_v1_chr5_-_142783214	173841	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr6	120063835	120063908	reg1004286.p2	4.653	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-392950	-	BX538186 AK091682 AX747126 NM_001100411	-593525	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-663963	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	1591772	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	1692954	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	2656824	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.022609	
chr9	28952080	28952180	reg1030884.p1	4.653	+	AK056372 NM_152570	-232828	-	AK057806 JN681271 NM_145005	-1378289	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-1378659	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	3432460	+	TSC_hg19_v1_chr9_+_32384622 AK057904	3432497	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	3432519	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.920446	CTCF.p2:2:0.920
chr9	44019525	44019656	reg1026344.p1	4.653	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-334747	+	NM_001145196	-388861	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-886103	-	TSC_hg19_v1_chr9_+_45441926 BC006438	1422336	+	BC040528 NM_001113541 NM_015667	21490019	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	22437711	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	1.419076	CTCF.p2:28:0.981	CTCF.p2:82:0.438
chr12	14725479	14725584	reg1027872.p1	4.652	+	NM_024829 TSC_hg19_v1_chr12_-_14720806	-4727	-	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	-4922	-	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	-187259	+	BC136544 BC136545 M73489 TSC_hg19_v1_chr12_-_14849534 S57551 AK310034 NM_004963	123954	-	AB527963 TSC_hg19_v1_chr12_-_14924064 AK311916 BC020884 NM_175054	198510	-	NM_177925 TSC_hg19_v1_chr12_+_14927302	201754	+	NM_024829|PLBD1|79887|phospholipase B domain containing 1##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##BC136544|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##BC136545|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##M73489|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##S57551|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##AK310034|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##NM_004963|GUCY2C|2984|guanylate cyclase 2C (heat stable enterotoxin receptor)##BC020884|HIST4H4|121504|histone cluster 4, H4##NM_175054|HIST4H4|121504|histone cluster 4, H4##NM_177925|H2AFJ|55766|H2A histone family, member J	0.184034	
chr13	53318284	53318374	reg1027507.p2	4.652	+	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-4367	-	AB006000 CR541910 TSC_hg19_v1_chr13_-_53313891	-4465	-	NM_001130912 NM_006704 TSC_hg19_v1_chr13_+_53227044 AJ344097 AK292128 AY321358 AK302363 AY271314 BC000911 AK291402 AB528309 AF132856 BT009798 DQ890945 DQ894108	-91387	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	104446	-	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	284583	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	4396787	+	BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AB006000|LECT1|11061|leukocyte cell derived chemotaxin 1##CR541910|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001130912|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##NM_006704|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AJ344097|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK292128|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY321358|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK302363|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY271314|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC000911|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK291402|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF132856|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BT009798|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ890945|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ894108|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	0.091709	
chr17	30161652	30161832	reg1029331.p2	4.652	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-346681	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-442878	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-443075	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	24529	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	66924	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	66989	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.0	
chr21	47563723	47563903	reg1006396.p2	4.652	+	M34570 TSC_hg19_v1_chr21_+_47546455	-17372	+	AL360197 TSC_hg19_v1_chr21_+_47545943	-17893	+	TSC_hg19_v1_chr21_+_47545200 BT006913	-18617	+	BC136383 BC136395 BC052248 AF169017 AF289021 AF289022 AF289023 AF289024 NM_006657 NM_206965 TSC_hg19_v1_chr21_-_47575491	11670	-	AL136871 TSC_hg19_v1_chr21_-_47604330	40503	-	TSC_hg19_v1_chr21_-_47604340 BC084577	40533	-	M34570|COL6A2|1292|collagen, type VI, alpha 2##AL360197|COL6A2|1292|collagen, type VI, alpha 2##BT006913|COL6A2|1292|collagen, type VI, alpha 2##BC136383|FTCD|10841|formiminotransferase cyclodeaminase##BC136395|FTCD|10841|formiminotransferase cyclodeaminase##BC052248|FTCD|10841|formiminotransferase cyclodeaminase##AF169017|FTCD|10841|formiminotransferase cyclodeaminase##AF289021|FTCD|10841|formiminotransferase cyclodeaminase##AF289022|FTCD|10841|formiminotransferase cyclodeaminase##AF289023|FTCD|10841|formiminotransferase cyclodeaminase##AF289024|FTCD|10841|formiminotransferase cyclodeaminase##NM_006657|FTCD|10841|formiminotransferase cyclodeaminase##NM_206965|FTCD|10841|formiminotransferase cyclodeaminase##AL136871|C21orf56|84221|chromosome 21 open reading frame 56##BC084577|C21orf56|84221|chromosome 21 open reading frame 56	0.0	
chr2	169471300	169471456	reg1029587.p1	4.652	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	-158503	+	TSC_hg19_v1_chr2_+_169312764 AK172775	-158619	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	-367305	-	AK093444 AX748130 NM_001171631	171670	+	NM_001039724 NM_001171632 BC014189 NM_052946 AK002203 AK290254 BC093072 AJ532842 DQ402497	187749	+	TSC_hg19_v1_chr2_-_169746945 AF225416 BC022255 NM_020675 AK291093	275563	-	NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6##AK172775|CERS6|253782|ceramide synthase 6##BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##AK093444|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171631|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001039724|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171632|NOSTRIN|115677|nitric oxide synthase trafficker##BC014189|NOSTRIN|115677|nitric oxide synthase trafficker##NM_052946|NOSTRIN|115677|nitric oxide synthase trafficker##AK002203|NOSTRIN|115677|nitric oxide synthase trafficker##AK290254|NOSTRIN|115677|nitric oxide synthase trafficker##BC093072|NOSTRIN|115677|nitric oxide synthase trafficker##AJ532842|NOSTRIN|115677|nitric oxide synthase trafficker##DQ402497|NOSTRIN|115677|nitric oxide synthase trafficker##AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	0.783722	CTCF.p2:28:0.784
chr22	37186784	37186903	reg1028504.p1	4.652	+	AL022729 TSC_hg19_v1_chr22_-_37172162 AK307105 AK307382 BC000566 AB209424 NM_001177701 NM_006860	-14688	-	NM_001177702	-22770	-	AB528094 AF096322 CU012974 CU013262 CU686936 HQ258186 CR456414 BC112297 BC112299 BC069612 NM_006078	-88189	-	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	28676	-	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	70265	+	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	122815	+	AL022729|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307105|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307382|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC000566|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AB209424|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177701|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_006860|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177702|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AF096322|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CU012974|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CU013262|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##HQ258186|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CR456414|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC112297|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC112299|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC069612|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##NM_006078|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)	0.783349	CTCF.p2:-23:0.783
chr7	1101987	1102158	reg1030015.p1	4.652	+	BC014241 NM_138445 AB464540 DQ892659 DQ895899	-4928	+	TSC_hg19_v1_chr7_-_1067984 L07392 BC025971	-34115	-	TSC_hg19_v1_chr7_+_1022978 AK000366	-79103	+	NM_001039966 NM_001505 AF015257	24404	+	NM_001098201 AK289588 U63917 BC067849	25681	+	TSC_hg19_v1_chr7_-_1177884 AF495721 BC006224 NM_001134395 NM_001134396 NM_032350	75790	-	BC014241|GPR146|115330|G protein-coupled receptor 146##NM_138445|GPR146|115330|G protein-coupled receptor 146##DQ892659|GPR146|115330|G protein-coupled receptor 146##DQ895899|GPR146|115330|G protein-coupled receptor 146##BC025971|C7orf50|84310|chromosome 7 open reading frame 50##AK000366|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##NM_001039966|GPER|2852|G protein-coupled estrogen receptor 1##NM_001505|GPER|2852|G protein-coupled estrogen receptor 1##AF015257|GPER|2852|G protein-coupled estrogen receptor 1##NM_001098201|GPER|2852|G protein-coupled estrogen receptor 1##AK289588|GPER|2852|G protein-coupled estrogen receptor 1##U63917|GPER|2852|G protein-coupled estrogen receptor 1##BC067849|GPER|2852|G protein-coupled estrogen receptor 1##AF495721|C7orf50|84310|chromosome 7 open reading frame 50##BC006224|C7orf50|84310|chromosome 7 open reading frame 50##NM_001134395|C7orf50|84310|chromosome 7 open reading frame 50##NM_001134396|C7orf50|84310|chromosome 7 open reading frame 50##NM_032350|C7orf50|84310|chromosome 7 open reading frame 50	0.0	
chr2	95872882	95873062	reg1030360.p2	4.651	+	AK295739 TSC_hg19_v1_chr2_+_95831557 AK315762 AK290798 AK315829 AK299058 X60154	-41420	+	X60152 AK055072 NM_001017396 NM_021088 BC005068 CR749650	-41779	+	BC068498 TSC_hg19_v1_chr2_-_95825526	-47456	-	TSC_hg19_v1_chr2_+_95940195 AF245303 AF245304 NM_001165977 NM_001165978 NM_144707	67225	+	BC113877 BC114525 AK091175 AX746828 TSC_hg19_v1_chr2_+_95940239 AK290366 AK313267 AY358377 BC025736	67262	+	TSC_hg19_v1_chr2_+_95963054 NM_013434 AB209076 AJ131730 AK095539 AK315437 BC012850 AF120102 AB528387 AF199599 AF367022 BT020075 CU680412 DQ148485 DQ892078 DQ895271 DQ895316	90134	+	AK295739|ZNF2|7549|zinc finger protein 2##AK315762|ZNF2|7549|zinc finger protein 2##AK290798|ZNF2|7549|zinc finger protein 2##AK315829|ZNF2|7549|zinc finger protein 2##AK299058|ZNF2|7549|zinc finger protein 2##X60154|ZNF2|7549|zinc finger protein 2##X60152|ZNF2|7549|zinc finger protein 2##AK055072|ZNF2|7549|zinc finger protein 2##NM_001017396|ZNF2|7549|zinc finger protein 2##NM_021088|ZNF2|7549|zinc finger protein 2##BC005068|ZNF2|7549|zinc finger protein 2##CR749650|ZNF2|7549|zinc finger protein 2##BC068498|ZNF514|84874|zinc finger protein 514##AF245303|PROM2|150696|prominin 2##AF245304|PROM2|150696|prominin 2##NM_001165977|PROM2|150696|prominin 2##NM_001165978|PROM2|150696|prominin 2##NM_144707|PROM2|150696|prominin 2##BC113877|PROM2|150696|prominin 2##BC114525|PROM2|150696|prominin 2##AK091175|PROM2|150696|prominin 2##AK290366|PROM2|150696|prominin 2##AK313267|PROM2|150696|prominin 2##AY358377|PROM2|150696|prominin 2##BC025736|PROM2|150696|prominin 2##NM_013434|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AJ131730|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK095539|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK315437|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC012850|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF120102|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF199599|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF367022|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BT020075|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ148485|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ892078|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895271|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895316|KCNIP3|30818|Kv channel interacting protein 3, calsenilin	0.0	
chr4	160376922	160377039	reg1027836.p1	4.651	+	AK294459 NM_014247	-187983	+	AK058100 NM_152543	-420648	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-686695	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	2708171	-	TSC_hg19_v1_chr4_-_164088002 AK097352	3711012	-	TSC_hg19_v1_chr4_-_164088043 AK308601	3711057	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.079187	
chr6	33547954	33548066	reg1030325.p1	4.651	+	U23765 U16811 TSC_hg19_v1_chr6_-_33547998 X84213 BC004431 BC032789 BC110337 AK091807 AK292093	-95	-	TSC_hg19_v1_chr6_+_33422352 AK313571 AK122644 NM_152735 BC014978	-125638	+	AK094225 NM_006772 AB067525 AK307888 AB385518	-160067	+	TSC_hg19_v1_chr6_-_33548037 AK303422 AK293547 NM_001188	33	-	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	41184	+	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	131453	-	U23765|BAK1|578|BCL2-antagonist/killer 1##U16811|BAK1|578|BCL2-antagonist/killer 1##X84213|BAK1|578|BCL2-antagonist/killer 1##BC004431|BAK1|578|BCL2-antagonist/killer 1##BC032789|BAK1|578|BCL2-antagonist/killer 1##BC110337|BAK1|578|BCL2-antagonist/killer 1##AK091807|BAK1|578|BCL2-antagonist/killer 1##AK292093|BAK1|578|BCL2-antagonist/killer 1##AK313571|ZBTB9|221504|zinc finger and BTB domain containing 9##AK122644|ZBTB9|221504|zinc finger and BTB domain containing 9##NM_152735|ZBTB9|221504|zinc finger and BTB domain containing 9##BC014978|ZBTB9|221504|zinc finger and BTB domain containing 9##AK094225|SYNGAP1|8831|synaptic Ras GTPase activating protein 1##NM_006772|SYNGAP1|8831|synaptic Ras GTPase activating protein 1##AK307888|SYNGAP1|8831|synaptic Ras GTPase activating protein 1##AK303422|BAK1|578|BCL2-antagonist/killer 1##AK293547|BAK1|578|BCL2-antagonist/killer 1##NM_001188|BAK1|578|BCL2-antagonist/killer 1##D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125	0.801075	CTCF.p2:26:0.801
chr10	11760292	11760473	reg1028453.p2	4.650	+	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	-106746	-	NM_001080491	-186109	-	TSC_hg19_v1_chr10_+_11207490 AK295511	-552890	+	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	24016	+	TSC_hg19_v1_chr10_+_11865354 BC017269 BC048800 NM_153256	104976	+	AK056703 TSC_hg19_v1_chr10_-_11936707	176320	-	AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK295511|CELF2|10659|CUGBP, Elav-like family member 2##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC017269|C10orf47|254427|chromosome 10 open reading frame 47##BC048800|C10orf47|254427|chromosome 10 open reading frame 47##NM_153256|C10orf47|254427|chromosome 10 open reading frame 47##AK056703|LOC219731|219731|uncharacterized LOC219731	0.619319	CTCF.p2:57:0.619
chr1	12138931	12139111	reg1010991.p1	4.650	+	M83554 NM_001243 BC136400 BC171762 S75768	-15477	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-59451	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-59487	+	D86042 BC063482 NM_152942 BC073839 BC141804	46995	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	88040	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	88090	+	M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr14	59263666	59263847	reg1025852.p1	4.650	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-159010	+	AK302579 NM_001244193 AK310356 AK302718	-357330	+	NM_014749 BC066647	-369025	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	391648	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	668166	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	668300	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.0	
chr7	143760950	143761087	reg1032122.p1	4.650	+	BC136858 BC136860 NM_012365	-13541	+	BC137042 BC137047 NM_001005281	-59963	+	BC104975 NM_012369	-103999	+	BC136814 BC136829 NM_001004488	10275	+	BC136902 BC136903 NM_001004135	31152	+	BC136742 NM_001005480	45622	+	BC136858|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5##BC136860|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5##NM_012365|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5##BC137042|OR6B1|135946|olfactory receptor, family 6, subfamily B, member 1##BC137047|OR6B1|135946|olfactory receptor, family 6, subfamily B, member 1##NM_001005281|OR6B1|135946|olfactory receptor, family 6, subfamily B, member 1##BC104975|OR2F1|26211|olfactory receptor, family 2, subfamily F, member 1##NM_012369|OR2F1|26211|olfactory receptor, family 2, subfamily F, member 1##BC136814|OR2A25|392138|olfactory receptor, family 2, subfamily A, member 25##BC136829|OR2A25|392138|olfactory receptor, family 2, subfamily A, member 25##NM_001004488|OR2A25|392138|olfactory receptor, family 2, subfamily A, member 25##BC136902|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##BC136903|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##NM_001004135|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##BC136742|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2##NM_001005480|OR2A2|442361|olfactory receptor, family 2, subfamily A, member 2	0.974392	CTCF.p2:-19:0.974
chr7	153769091	153769208	reg1030522.p2	4.650	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	-19391	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	-184749	+	TSC_hg19_v1_chr7_+_152456872 NM_001040135 NM_020445 AK315534 BC008682 AK294292 AK316078 AF086920 BC015207 AF023453 CU677239 CU679037 DQ894754 EU176295	-1312256	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	233236	+	TSC_hg19_v1_chr7_+_154720213 BC033053 AK311721 AK056609 BC050402	951048	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	1025521	-	M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##NM_001040135|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##NM_020445|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK315534|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC008682|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK294292|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK316078|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF086920|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC015207|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF023453|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##DQ894754|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##EU176295|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6##BC033053|LOC100132707|100132707|uncharacterized LOC100132707##AK311721|LOC100132707|100132707|uncharacterized LOC100132707##AK056609|LOC100132707|100132707|uncharacterized LOC100132707##BC050402|LOC100132707|100132707|uncharacterized LOC100132707##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1	0.995648	CTCF.p2:-12:0.996
chr7	158314724	158314905	reg1028690.p2	4.650	+	TSC_hg19_v1_chr7_+_157647233 BC034557	-667540	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	-1185103	+	TSC_hg19_v1_chr7_+_157023934 AK098447	-1290808	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	65639	-	BC028618 TSC_hg19_v1_chr7_-_158497496 AK092008 AX747307 BC043404 BX537845 NM_017760	182663	-	TSC_hg19_v1_chr7_-_158611303 AK126214	296556	-	BC034557|LOC100506585|100506585|uncharacterized LOC100506585##AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC028618|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK092008|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BC043404|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BX537845|NCAPG2|54892|non-SMC condensin II complex, subunit G2##NM_017760|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK126214|ESYT2|57488|extended synaptotagmin-like protein 2	0.0	
chr11	237240	237341	reg1029610.p2	4.649	+	TSC_hg19_v1_chr11_+_236975 AK295944 AK094775 AK222895 AB009398 BC001100 AF083245 AK307447 AF107837 BC001747 BX647314 AB528493 DQ892171 DQ895365 AF086708 BT007307	-283	+	AK316175 TSC_hg19_v1_chr11_-_236906 AK308681	-401	-	NM_002817 NM_175932	-483	+	AF479748 AY154461 NM_138329	41279	+	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	51852	+	BC150562 BC150563 NM_001025295	62231	-	AK295944|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK094775|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK222895|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AB009398|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001100|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF083245|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK307447|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF107837|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001747|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BX647314|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ892171|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ895365|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF086708|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BT007307|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK316175|SIRT3|23410|sirtuin 3##AK308681|SIRT3|23410|sirtuin 3##NM_002817|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##NM_175932|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF479748|NLRP6|171389|NLR family, pyrin domain containing 6##AY154461|NLRP6|171389|NLR family, pyrin domain containing 6##NM_138329|NLRP6|171389|NLR family, pyrin domain containing 6##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5	0.0	
chr1	17732802	17732899	reg1027207.p2	4.649	+	AY443100 AB527380 AY422079 NM_207421	-34135	+	AF229067 AK314839 NM_012387 AB017919 AK290507 AK309637 BC025718 AB527709 CU693030	-98147	+	AB026831 NM_016233 BC109091 BC041592 BC109092	-157251	+	BC142946 TSC_hg19_v1_chr1_-_17764885	32012	-	TSC_hg19_v1_chr1_-_17765031 AB384219 BC042141	32160	-	TSC_hg19_v1_chr1_-_17765069 BC053908 NM_001136204	32211	-	AY443100|PADI6|353238|peptidyl arginine deiminase, type VI##AY422079|PADI6|353238|peptidyl arginine deiminase, type VI##NM_207421|PADI6|353238|peptidyl arginine deiminase, type VI##AF229067|PADI4|23569|peptidyl arginine deiminase, type IV##AK314839|PADI4|23569|peptidyl arginine deiminase, type IV##NM_012387|PADI4|23569|peptidyl arginine deiminase, type IV##AB017919|PADI4|23569|peptidyl arginine deiminase, type IV##AK290507|PADI4|23569|peptidyl arginine deiminase, type IV##AK309637|PADI4|23569|peptidyl arginine deiminase, type IV##BC025718|PADI4|23569|peptidyl arginine deiminase, type IV##AB026831|PADI3|51702|peptidyl arginine deiminase, type III##NM_016233|PADI3|51702|peptidyl arginine deiminase, type III##BC109091|PADI3|51702|peptidyl arginine deiminase, type III##BC041592|PADI3|51702|peptidyl arginine deiminase, type III##BC109092|PADI3|51702|peptidyl arginine deiminase, type III##BC142946|RCC2|55920|regulator of chromosome condensation 2##BC042141|RCC2|55920|regulator of chromosome condensation 2##BC053908|RCC2|55920|regulator of chromosome condensation 2##NM_001136204|RCC2|55920|regulator of chromosome condensation 2	1.138439	CTCF.p2:-8:1.000
chr1	184660989	184661149	reg1032216.p1	4.649	+	TSC_hg19_v1_chr1_+_184356377 AK056487	-304681	+	AF312864 TSC_hg19_v1_chr1_+_184356245 AY258286	-304803	+	TSC_hg19_v1_chr1_+_184356194 BC028567	-304872	+	BC144149 BC144150 AF288393 TSC_hg19_v1_chr1_-_184723746 AB385131	62688	-	TSC_hg19_v1_chr1_-_184723964 BC070173 BC105586	62896	-	AK225171 TSC_hg19_v1_chr1_-_184723985 AK315118	62915	-	AK056487|C1orf21|81563|chromosome 1 open reading frame 21##AF312864|C1orf21|81563|chromosome 1 open reading frame 21##AY258286|C1orf21|81563|chromosome 1 open reading frame 21##BC028567|C1orf21|81563|chromosome 1 open reading frame 21##BC144149|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC144150|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AF288393|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC070173|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC105586|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK225171|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK315118|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3	0.663824	CTCF.p2:-24:0.664
chr12	129098495	129098606	reg1029611.p1	4.649	+	NM_001136103	-346603	+	NM_052907	-3287389	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-3548482	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	209893	-	BC043528 TSC_hg19_v1_chr12_+_129337985	239434	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	239537	+	NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1	1.902949	CTCF.p2:-29:0.953	CTCF.p2:35:0.950
chr3	59360716	59360837	reg1028247.p2	4.649	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-325016	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-325035	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-325068	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	1876314	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	2186435	+	BC047734 TSC_hg19_v1_chr3_+_61547294	2186510	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.0	
chr5	139455100	139455201	reg1027536.p1	4.649	+	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	-32305	-	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	-32422	-	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	-279744	+	TSC_hg19_v1_chr5_+_139493703 M96684 NM_005859 BC110574 BC110594 BC036087 AB464679 BT019388	38577	+	BC041380 NM_001007189	50369	+	TSC_hg19_v1_chr5_+_139554672 NM_032412	99504	+	U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##M96684|PURA|5813|purine-rich element binding protein A##NM_005859|PURA|5813|purine-rich element binding protein A##BC110574|PURA|5813|purine-rich element binding protein A##BC110594|PURA|5813|purine-rich element binding protein A##BC036087|PURA|5813|purine-rich element binding protein A##BT019388|PURA|5813|purine-rich element binding protein A##BC041380|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##NM_001007189|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##NM_032412|C5orf32|84418|chromosome 5 open reading frame 32	0.056861	
chr1	212336012	212336193	reg1030969.p1	4.648	+	TSC_hg19_v1_chr1_+_212209137 AF195765 AK299649 BC033297 AK027651 CU689622 CU689648 DQ641253	-126922	+	BC033540 TSC_hg19_v1_chr1_+_212209112 AF345896	-126984	+	NM_016448 AK292343 TSC_hg19_v1_chr1_+_212209090 AK000742 AK303346	-127088	+	TSC_hg19_v1_chr1_+_212458776 AK312530	122676	+	TSC_hg19_v1_chr1_+_212458867 L42373 NM_006243	122770	+	BC110883 TSC_hg19_v1_chr1_+_212459259	123112	+	AF195765|DTL|51514|denticleless homolog (Drosophila)##AK299649|DTL|51514|denticleless homolog (Drosophila)##BC033297|DTL|51514|denticleless homolog (Drosophila)##AK027651|DTL|51514|denticleless homolog (Drosophila)##DQ641253|DTL|51514|denticleless homolog (Drosophila)##BC033540|DTL|51514|denticleless homolog (Drosophila)##AF345896|DTL|51514|denticleless homolog (Drosophila)##NM_016448|DTL|51514|denticleless homolog (Drosophila)##AK292343|DTL|51514|denticleless homolog (Drosophila)##AK000742|DTL|51514|denticleless homolog (Drosophila)##AK303346|DTL|51514|denticleless homolog (Drosophila)##AK312530|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##L42373|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##NM_006243|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##BC110883|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha	0.0	
chr14	59263975	59264105	reg1025852.p2	4.648	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-159294	+	AK302579 NM_001244193 AK310356 AK302718	-357614	+	NM_014749 BC066647	-369309	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	391364	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	667882	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	668016	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.0	
chr15	84915353	84915525	reg1009436.p2	4.648	+	NM_001243531	-74198	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-592612	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-799211	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	228842	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	282033	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	282067	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	0.705869	CTCF.p2:38:0.706
chr2	15085297	15085407	reg1029840.p1	4.648	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	-312501	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	-312531	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-2226955	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	616077	-	TSC_hg19_v1_chr2_-_15701451 BC108693 AF388385 BC131735 NM_015909 AB621813	616106	-	NM_004939 X70649	646417	+	AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence##BC108693|NBAS|51594|neuroblastoma amplified sequence##AF388385|NBAS|51594|neuroblastoma amplified sequence##BC131735|NBAS|51594|neuroblastoma amplified sequence##NM_015909|NBAS|51594|neuroblastoma amplified sequence##AB621813|NBAS|51594|neuroblastoma amplified sequence##NM_004939|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##X70649|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	0.758741	CTCF.p2:26:0.759
chr22	30217293	30217421	reg1027771.p1	4.648	+	AF161536 TSC_hg19_v1_chr22_+_30163357 AB028598 BC005402 NM_001003684 NM_013387 AF161500 BC015971 AK225973 AF112217 AF161468	-53988	+	TSC_hg19_v1_chr22_-_30162997 AK123261	-54362	-	BC009717 TSC_hg19_v1_chr22_-_30162985 AK292671 NM_001003692 NM_019103	-54397	-	AK126172 TSC_hg19_v1_chr22_-_30234220 AK022886	16830	-	BC025368 TSC_hg19_v1_chr22_-_30234264 AK303257 NM_001242906 NM_032204	16915	-	TSC_hg19_v1_chr22_+_30279167 BC151217 AK289581 NM_021090 NM_153050 NM_153051	61772	+	AF161536|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AB028598|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##BC005402|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##NM_001003684|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##NM_013387|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AF161500|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##BC015971|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AK225973|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AF112217|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AF161468|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##BC009717|ZMAT5|55954|zinc finger, matrin-type 5##AK292671|ZMAT5|55954|zinc finger, matrin-type 5##NM_001003692|ZMAT5|55954|zinc finger, matrin-type 5##NM_019103|ZMAT5|55954|zinc finger, matrin-type 5##AK022886|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##BC025368|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##AK303257|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##NM_001242906|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##NM_032204|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##BC151217|MTMR3|8897|myotubularin related protein 3##AK289581|MTMR3|8897|myotubularin related protein 3##NM_021090|MTMR3|8897|myotubularin related protein 3##NM_153050|MTMR3|8897|myotubularin related protein 3##NM_153051|MTMR3|8897|myotubularin related protein 3	0.0	
chr2	97193837	97194017	reg1024333.p3	4.648	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-192391	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-192451	+	NM_178495 NM_001163524 BC034503	-201979	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	8558	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	110092	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	110140	-	BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_178495|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163524|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC034503|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.0	
chr5	147670268	147670394	reg1028584.p1	4.648	+	EF108324 EF426754 BC128163 BC128164 NM_001040129	-21933	+	GQ504704 NM_001195290 NM_205841 GQ504705 BC032003	-87961	+	NM_001001325	-121036	+	AK311570 AF268198 NM_032566 AY359072 BC109385 BC110067	21676	+	AY396740 NM_001040433 BC137530 BC137531	44804	+	AK054753 TSC_hg19_v1_chr5_-_147763424	93053	-	EF108324|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##EF426754|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##BC128163|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##BC128164|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##NM_001040129|SPINK13|153218|serine peptidase inhibitor, Kazal type 13 (putative)##GQ504704|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##NM_001195290|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##NM_205841|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##GQ504705|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##BC032003|SPINK6|404203|serine peptidase inhibitor, Kazal type 6##NM_001001325|SPINK14|408187|serine peptidase inhibitor, Kazal type 14 (putative)##AF268198|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##NM_032566|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##AY359072|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##BC109385|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##BC110067|SPINK7|84651|serine peptidase inhibitor, Kazal type 7 (putative)##AY396740|SPINK9|643394|serine peptidase inhibitor, Kazal type 9##NM_001040433|SPINK9|643394|serine peptidase inhibitor, Kazal type 9##BC137530|SPINK9|643394|serine peptidase inhibitor, Kazal type 9##BC137531|SPINK9|643394|serine peptidase inhibitor, Kazal type 9	0.080836	
chrX	62389036	62389146	reg1024783.p2	4.648	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-4452132	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-4770631	+	NM_007157	-4770823	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	182108	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	259176	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	391776	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.747441	CTCF.p2:-3:0.747
chrX	84867073	84867187	reg1026456.p1	4.648	+	TSC_hg19_v1_chrX_-_84634749 AF309774 NM_024921	-232381	-	TSC_hg19_v1_chrX_-_84634671 AK314295 AK025039 AK290360 BC017500	-232434	-	TSC_hg19_v1_chrX_-_84634396 DQ892227	-232703	-	AK299323 BC032237 BC130494 BC130496 AK291160 AK312443 NM_000390 NM_001145414 X78121	435421	-	TSC_hg19_v1_chrX_+_85403454 AK290596 NM_001139514 NM_053281	536322	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	536335	+	AF309774|POF1B|79983|premature ovarian failure, 1B##NM_024921|POF1B|79983|premature ovarian failure, 1B##AK314295|POF1B|79983|premature ovarian failure, 1B##AK025039|POF1B|79983|premature ovarian failure, 1B##AK290360|POF1B|79983|premature ovarian failure, 1B##BC017500|POF1B|79983|premature ovarian failure, 1B##DQ892227|POF1B|79983|premature ovarian failure, 1B##AK299323|CHM|1121|choroideremia (Rab escort protein 1)##BC032237|CHM|1121|choroideremia (Rab escort protein 1)##BC130494|CHM|1121|choroideremia (Rab escort protein 1)##BC130496|CHM|1121|choroideremia (Rab escort protein 1)##AK291160|CHM|1121|choroideremia (Rab escort protein 1)##AK312443|CHM|1121|choroideremia (Rab escort protein 1)##NM_000390|CHM|1121|choroideremia (Rab escort protein 1)##NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)##X78121|CHM|1121|choroideremia (Rab escort protein 1)##AK290596|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139514|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_053281|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)	0.99841	CTCF.p2:-8:0.998
chr17	64911390	64911500	reg1031456.p2	4.647	+	BC101633 NM_145811 BC101607 AF361351 AF458898	-38025	+	AK290171 TSC_hg19_v1_chr17_+_64831234	-80210	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	-612518	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	49444	+	NM_000727 L07738 AK313852 BC113486 BC113492 BC069493 HQ258641	129266	+	D29677 AK310217 TSC_hg19_v1_chr17_-_65241302 BC130582 BC144083	329844	-	BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##NM_000727|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##L07738|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##AK313852|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113486|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113492|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC069493|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##HQ258641|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##D29677|HELZ|9931|helicase with zinc finger##AK310217|HELZ|9931|helicase with zinc finger##BC130582|HELZ|9931|helicase with zinc finger##BC144083|HELZ|9931|helicase with zinc finger	0.035855	
chr19	42210689	42210800	reg1023398.p1	4.647	+	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	-18592	-	D90276 AK298701 NM_001817	-77310	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	-128167	+	TSC_hg19_v1_chr19_+_42212531 NM_004363	1784	+	TSC_hg19_v1_chr19_+_42212544 M29540 AK310844 BC034671 AK223101	1807	+	TSC_hg19_v1_chr19_+_42212619 CR749337 DQ890840 DQ896753 CU689928 M15042 X16455	1892	+	AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_004363|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M29540|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK310844|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##BC034671|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK223101|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##CR749337|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ890840|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ896753|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M15042|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##X16455|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5	1.01642	CTCF.p2:6:1.000
chr19	57862600	57862780	reg1025902.p2	4.647	+	TSC_hg19_v1_chr19_+_57862669 NM_020657 AJ276316 BC111531 BC111532	-27	+	TSC_hg19_v1_chr19_+_57831849 NM_213598 AK131547	-30776	+	TSC_hg19_v1_chr19_+_57791852 AK292144 NM_006635 AK074582 AY329492	-70803	+	AF058918 AF291676 AK055662 NM_173631 BC008889 BC032809 BC042681 AL832545 BC064426 AK291464	12226	+	TSC_hg19_v1_chr19_+_57901221 BC030788 NM_001172773 NM_152909 AK057494	38561	+	TSC_hg19_v1_chr19_+_57901344 AK299069 EU446719	38708	+	NM_020657|ZNF304|57343|zinc finger protein 304##AJ276316|ZNF304|57343|zinc finger protein 304##BC111531|ZNF304|57343|zinc finger protein 304##BC111532|ZNF304|57343|zinc finger protein 304##NM_213598|ZNF543|125919|zinc finger protein 543##AK131547|ZNF543|125919|zinc finger protein 543##AK292144|ZNF460|10794|zinc finger protein 460##NM_006635|ZNF460|10794|zinc finger protein 460##AK074582|ZNF460|10794|zinc finger protein 460##AY329492|ZNF460|10794|zinc finger protein 460##AF058918|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##AF291676|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##AK055662|ZNF547|284306|zinc finger protein 547##NM_173631|ZNF547|284306|zinc finger protein 547##BC008889|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##BC032809|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##BC042681|ZNF547|284306|zinc finger protein 547##AL832545|ZNF547|284306|zinc finger protein 547##AK291464|ZNF547|284306|zinc finger protein 547##BC030788|ZNF548|147694|zinc finger protein 548##NM_001172773|ZNF548|147694|zinc finger protein 548##NM_152909|ZNF548|147694|zinc finger protein 548##AK057494|ZNF548|147694|zinc finger protein 548##AK299069|ZNF548|147694|zinc finger protein 548##EU446719|ZNF17|7565|zinc finger protein 17	0.0	
chr2	69534255	69534372	reg1007575.p1	4.647	+	TSC_hg19_v1_chr2_+_69240310 NM_018153 NM_032208 NM_053034 AF279145 AK001463 AY928974 AY928975 AY928976 AY928977 AK223273 BC012074 AK309553 AF421380 AK292113 CU680200 EU832615 EU832687	-293930	+	AB039886 AJ966789 NM_019617 AB590637 AY139184 AK098489 AY456961 BC059778 AY359050	-332571	+	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	-354257	-	TSC_hg19_v1_chr2_-_69614353 M90516 BC045641 NM_001244710 NM_002056	80092	-	AJ132584 AF132967 AB528729 HQ258750 TSC_hg19_v1_chr2_-_69664568 AK300700 AK308567	130260	-	TSC_hg19_v1_chr2_-_69664606 AY286306 AY286307 BX538347	130301	-	NM_018153|ANTXR1|84168|anthrax toxin receptor 1##NM_032208|ANTXR1|84168|anthrax toxin receptor 1##NM_053034|ANTXR1|84168|anthrax toxin receptor 1##AF279145|ANTXR1|84168|anthrax toxin receptor 1##AK001463|ANTXR1|84168|anthrax toxin receptor 1##AK223273|ANTXR1|84168|anthrax toxin receptor 1##BC012074|ANTXR1|84168|anthrax toxin receptor 1##AK309553|ANTXR1|84168|anthrax toxin receptor 1##AF421380|ANTXR1|84168|anthrax toxin receptor 1##AK292113|ANTXR1|84168|anthrax toxin receptor 1##EU832615|ANTXR1|84168|anthrax toxin receptor 1##EU832687|ANTXR1|84168|anthrax toxin receptor 1##AB039886|GKN1|56287|gastrokine 1##AJ966789|GKN1|56287|gastrokine 1##NM_019617|GKN1|56287|gastrokine 1##AY139184|GKN1|56287|gastrokine 1##AK098489|GKN1|56287|gastrokine 1##AY456961|GKN1|56287|gastrokine 1##BC059778|GKN1|56287|gastrokine 1##AY359050|GKN1|56287|gastrokine 1##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2##M90516|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##BC045641|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_001244710|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_002056|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##AJ132584|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AF132967|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##HQ258750|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK300700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK308567|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286306|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286307|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BX538347|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	0.326188	CTCF.p2:-8:0.326
chr3	58319444	58319587	reg1023928.p3	4.647	+	TSC_hg19_v1_chr3_+_58318663 BC008943 AB209688 AK131385 AY437879 AK296215 BC014479 AY847220 AY847221 AY847222 AF399753 CU677017 DQ124707 DQ124708	-841	+	TSC_hg19_v1_chr3_+_58318618 AY274811 NM_017771 AK000342 AK295542	-902	+	AK311396 TSC_hg19_v1_chr3_+_58292265 AK311969	-27254	+	M34056 M19123 BC004115 AB528205 AM392999 AM393278 CR541911 CU674222 DQ891366 DQ894546 M34479 M34055 M54788 AB209241 AL117618 AK293153 BC000439 BC001924 TSC_hg19_v1_chr3_-_58419557 AK225569 AK311514 AK313022 J03576 X57778 AK225621 NM_000925 NM_001173468	99967	-	TSC_hg19_v1_chr3_+_58477822 NM_001128214 AK075297	158323	+	AK074934 NM_153331	164576	+	BC008943|PXK|54899|PX domain containing serine/threonine kinase##AB209688|PXK|54899|PX domain containing serine/threonine kinase##AK131385|PXK|54899|PX domain containing serine/threonine kinase##AY437879|PXK|54899|PX domain containing serine/threonine kinase##AK296215|PXK|54899|PX domain containing serine/threonine kinase##BC014479|PXK|54899|PX domain containing serine/threonine kinase##AY847220|PXK|54899|PX domain containing serine/threonine kinase##AY847221|PXK|54899|PX domain containing serine/threonine kinase##AY847222|PXK|54899|PX domain containing serine/threonine kinase##AF399753|PXK|54899|PX domain containing serine/threonine kinase##DQ124707|PXK|54899|PX domain containing serine/threonine kinase##DQ124708|PXK|54899|PX domain containing serine/threonine kinase##AY274811|PXK|54899|PX domain containing serine/threonine kinase##NM_017771|PXK|54899|PX domain containing serine/threonine kinase##AK000342|PXK|54899|PX domain containing serine/threonine kinase##AK295542|PXK|54899|PX domain containing serine/threonine kinase##AK311396|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AK311969|RPP14|11102|ribonuclease P/MRP 14kDa subunit##M34056|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M19123|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC004115|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM392999|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM393278|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##CR541911|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ891366|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ894546|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34479|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34055|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M54788|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AB209241|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AL117618|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK293153|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC000439|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC001924|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225569|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK311514|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK313022|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##J03576|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##X57778|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225621|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_000925|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_001173468|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_001128214|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK075297|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK074934|KCTD6|200845|potassium channel tetramerisation domain containing 6##NM_153331|KCTD6|200845|potassium channel tetramerisation domain containing 6	0.0	
chr3	62545648	62545763	reg1026697.p2	4.647	+	AK290464 NM_018008	-186516	-	BC017772 NM_020685	-240310	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	-240999	+	TSC_hg19_v1_chr3_-_62860565 AB587314	314927	-	AF458662 AB593079 TSC_hg19_v1_chr3_-_62861056 AB032947 NM_003716 NM_183393 NM_183394	315339	-	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	718212	+	AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##AF458662|CADPS|8618|Ca++-dependent secretion activator##AB593079|CADPS|8618|Ca++-dependent secretion activator##AB032947|CADPS|8618|Ca++-dependent secretion activator##NM_003716|CADPS|8618|Ca++-dependent secretion activator##NM_183393|CADPS|8618|Ca++-dependent secretion activator##NM_183394|CADPS|8618|Ca++-dependent secretion activator##NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin	0.978882	CTCF.p2:12:0.979
chr5	91806573	91806734	reg1027686.p1	4.647	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-1127521	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-1130491	+	AK091866 TSC_hg19_v1_chr5_-_90610220	-1196408	-	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	1110310	-	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	1112330	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	1114015	+	BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	0.02645	
chr6	14109220	14109399	reg1027434.p2	4.647	+	NM_001165033 AK090576 AX746519	-183866	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	-184143	+	NM_001165034	-184633	+	NM_001251901	8177	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	8596	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	8713	+	NM_001165033|RNF182|221687|ring finger protein 182##AK090576|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182##NM_001165034|RNF182|221687|ring finger protein 182##NM_001251901|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule	0.0	
chr6	75976691	75976825	reg1009319.p2	4.647	+	TSC_hg19_v1_chr6_-_75970566 AL162046	-6183	-	AJ420517 TSC_hg19_v1_chr6_-_75965925	-10872	-	TSC_hg19_v1_chr6_-_75953518 NM_001865	-23181	-	TSC_hg19_v1_chr6_-_75994295 CU679225	17482	-	TSC_hg19_v1_chr6_-_75994482 AL832815 BC009006 AK292823	17728	-	TSC_hg19_v1_chr6_-_75994502 AK001718 AK295567 AK293225	17748	-	AL162046|TMEM30A|55754|transmembrane protein 30A##AJ420517|TMEM30A|55754|transmembrane protein 30A##NM_001865|COX7A2|1347|cytochrome c oxidase subunit VIIa polypeptide 2 (liver)##AL832815|TMEM30A|55754|transmembrane protein 30A##BC009006|TMEM30A|55754|transmembrane protein 30A##AK292823|TMEM30A|55754|transmembrane protein 30A##AK001718|TMEM30A|55754|transmembrane protein 30A##AK295567|TMEM30A|55754|transmembrane protein 30A##AK293225|TMEM30A|55754|transmembrane protein 30A	0.0	
chr8	27320144	27320325	reg1030791.p3	4.647	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-137157	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-137182	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-137217	+	AK314787 U62431 NM_000742	16537	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	28424	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	151971	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	0.018858	
chrX	150891087	150891215	reg1026952.p1	4.647	+	BC022064 AF249872 NM_033085 AK057369 AB528542 AM393498 CU692478 DQ892418 DQ895632	-6603	+	NM_024082	-27422	+	NM_173493 AK097552 BC040301 AY270020	-159048	+	AK128186 NM_005140 BC126302 BC126304	12131	+	NM_001011548	190209	+	NM_002362	193557	+	BC022064|FATE1|89885|fetal and adult testis expressed 1##AF249872|FATE1|89885|fetal and adult testis expressed 1##NM_033085|FATE1|89885|fetal and adult testis expressed 1##AM393498|FATE1|89885|fetal and adult testis expressed 1##DQ892418|FATE1|89885|fetal and adult testis expressed 1##DQ895632|FATE1|89885|fetal and adult testis expressed 1##NM_024082|PRRG3|79057|proline rich Gla (G-carboxyglutamic acid) 3 (transmembrane)##NM_173493|PASD1|139135|PAS domain containing 1##AK097552|PASD1|139135|PAS domain containing 1##BC040301|PASD1|139135|PAS domain containing 1##AY270020|PASD1|139135|PAS domain containing 1##AK128186|CNGA2|1260|cyclic nucleotide gated channel alpha 2##NM_005140|CNGA2|1260|cyclic nucleotide gated channel alpha 2##BC126302|CNGA2|1260|cyclic nucleotide gated channel alpha 2##BC126304|CNGA2|1260|cyclic nucleotide gated channel alpha 2##NM_001011548|MAGEA4|4103|melanoma antigen family A, 4##NM_002362|MAGEA4|4103|melanoma antigen family A, 4	0.280593	CTCF.p2:0:0.265
chr11	63669258	63669359	reg1030294.p1	4.646	+	NM_017490 AK290339 TSC_hg19_v1_chr11_+_63656059 X97630 AY562188	-13232	+	TSC_hg19_v1_chr11_+_63606599 AK307858	-62704	+	TSC_hg19_v1_chr11_+_63606564 AK225766	-62759	+	BC023587 NM_173587	15007	-	TSC_hg19_v1_chr11_-_63684632 AB593132	15331	-	TSC_hg19_v1_chr11_+_63706473 NM_024771 AK023910 AK300451 AK303557 JF263566 BC041617 BC052298	37176	+	NM_017490|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK290339|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##X97630|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AY562188|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK307858|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK225766|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##BC023587|RCOR2|283248|REST corepressor 2##NM_173587|RCOR2|283248|REST corepressor 2##AB593132|RCOR2|283248|REST corepressor 2##NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##JF263566|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	0.606581	CTCF.p2:10:0.607
chr1	203290264	203290445	reg1030815.p2	4.646	+	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	-15665	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-91539	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-134428	-	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	27030	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	29855	-	AK172740 TSC_hg19_v1_chr1_-_203320256	29907	-	NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.0	
chr1	219240530	219240626	reg1023460.p1	4.646	+	M19154 TSC_hg19_v1_chr1_+_218519634	-720973	+	NM_001135599 NM_003238 TSC_hg19_v1_chr1_+_218518677 AB209842	-721867	+	AK290066 BC003668 TSC_hg19_v1_chr1_+_218458652 BC020641 AF151873	-781909	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	106580	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	106664	+	BC036078 TSC_hg19_v1_chr1_-_220101540	860951	-	M19154|TGFB2|7042|transforming growth factor, beta 2##NM_001135599|TGFB2|7042|transforming growth factor, beta 2##NM_003238|TGFB2|7042|transforming growth factor, beta 2##AB209842|TGFB2|7042|transforming growth factor, beta 2##AK290066|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC003668|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC020641|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AF151873|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##BC036078|SLC30A10|55532|solute carrier family 30, member 10	0.0	
chr6	14110356	14110493	reg1030879.p2	4.646	+	NM_001165033 AK090576 AX746519	-184981	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	-185258	+	NM_001165034	-185748	+	NM_001251901	7062	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	7481	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	7598	+	NM_001165033|RNF182|221687|ring finger protein 182##AK090576|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182##NM_001165034|RNF182|221687|ring finger protein 182##NM_001251901|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule	0.0	
chr8	101441157	101441337	reg1028542.p2	4.646	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-118962	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-119066	-	AB271913 AB271914 AB029316 NM_015435	-125776	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	130693	-	AK093906 AX748361 NM_152628	220645	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	292559	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chrX	1600744	1600904	reg1030052.p1	4.646	+	AK301844 NM_001173473	-28173	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-29023	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-89855	-	BC043610 GQ280263 NM_178129 AK126147	55214	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	109705	+	NM_004043 U11090	113523	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr10	91093830	91093975	reg1028091.p1	4.645	+	NM_001031683 AK297137 AF026939 BC001383 BC004977	-1619	+	NM_001549 AK290427 AF083470 AK312675 U52513 TSC_hg19_v1_chr10_+_91087771	-6216	+	NM_001547 AK312831 BC005987 BC032839 TSC_hg19_v1_chr10_+_91061802 AK300431	-32147	+	BC040833 AK091558 TSC_hg19_v1_chr10_-_91102477	8553	-	BX647300 NM_001010987 BC150189 BC137368 BC137369	43925	+	NM_001548 BC007091 AK314588 AK308688 X03557	58461	+	NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##NM_001549|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK290427|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AF083470|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK312675|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##U52513|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##NM_001547|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##AK312831|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##BC005987|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##BC032839|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##AK300431|IFIT2|3433|interferon-induced protein with tetratricopeptide repeats 2##AK091558|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##BX647300|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##NM_001010987|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC150189|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC137368|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC137369|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##NM_001548|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##BC007091|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK314588|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK308688|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##X03557|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1	0.0	
chr11	67615504	67615615	reg1029590.p1	4.645	+	TSC_hg19_v1_chr11_-_67572800 BC063712 BC110365	-42807	-	TSC_hg19_v1_chr11_-_67450557 AB055770	-165013	-	BC007685 NM_001031615	-166875	-	TSC_hg19_v1_chr11_-_67771527 BC101568 BC105104 BC025669 AJ422142 AJ271326 BC092472 BC033623 NM_030930	156008	-	TSC_hg19_v1_chr11_+_67776039 EF411198 NM_001161473	160472	+	TSC_hg19_v1_chr11_+_67777790 NM_000694 NM_001030010 BC002553 AK291505	162231	+	BC063712|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC110365|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##AB055770|RPL37|6167|ribosomal protein L37##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC101568|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC105104|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC025669|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ422142|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ271326|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC092472|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC033623|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##NM_030930|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##EF411198|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001161473|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_000694|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001030010|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##BC002553|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##AK291505|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1	0.0	
chr14	31677019	31677114	reg1024439.p1	4.645	+	TSC_hg19_v1_chr14_-_31676920 BC016947	-131	-	TSC_hg19_v1_chr14_-_31676690 NM_015382	-381	-	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	-181496	-	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	212695	-	TSC_hg19_v1_chr14_-_31926633 BC010618 AK302829 AK055367 NM_080664	249609	-	GQ981321 GQ981322 NM_001197184	280084	-	NM_015382|HECTD1|25831|HECT domain containing 1##BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3##BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A##BC010618|C14orf126|112487|chromosome 14 open reading frame 126##AK055367|C14orf126|112487|chromosome 14 open reading frame 126##NM_080664|C14orf126|112487|chromosome 14 open reading frame 126##GQ981321|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##GQ981322|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##NM_001197184|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)	0.0	
chr2	20490892	20491046	reg1032908.p1	4.645	+	TSC_hg19_v1_chr2_-_20425168 NM_001006946	-65790	-	X60306 AB464260 CU679093 DQ893265 DQ896595 TSC_hg19_v1_chr2_-_20424892 AK299385 J05392 AK313974 AK222739 BC008765 AJ551176 AK311409 NM_002997	-66182	-	NM_014713	-239181	-	AF272350 TSC_hg19_v1_chr2_-_20512079	21080	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	36164	-	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	59450	-	NM_001006946|SDC1|6382|syndecan 1##X60306|SDC1|6382|syndecan 1##DQ893265|SDC1|6382|syndecan 1##DQ896595|SDC1|6382|syndecan 1##AK299385|SDC1|6382|syndecan 1##J05392|SDC1|6382|syndecan 1##AK313974|SDC1|6382|syndecan 1##AK222739|SDC1|6382|syndecan 1##BC008765|SDC1|6382|syndecan 1##AJ551176|SDC1|6382|syndecan 1##NM_002997|SDC1|6382|syndecan 1##NM_014713|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)	1.465308	CTCF.p2:21:0.991	CTCF.p2:-65:0.444
chr3	166555495	166555603	reg1030436.p1	4.645	+	NM_000055 TSC_hg19_v1_chr3_-_165555283	-1000282	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	-1000356	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	-1641044	-	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	542528	-	AK226025 AB006423 NM_006217 AK293391	636271	-	BC035512 NM_178824	815739	-	NM_000055|BCHE|590|butyrylcholinesterase##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing##AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##BC035512|WDR49|151790|WD repeat domain 49##NM_178824|WDR49|151790|WD repeat domain 49	0.995914	CTCF.p2:-12:0.996
chr3	40760231	40760411	reg1030044.p1	4.645	+	TSC_hg19_v1_chr3_+_40566471 BC101619 BC113415 CR749268	-193821	+	TSC_hg19_v1_chr3_+_40566380 AK127181 NM_001098414 NM_198484 AX721066 AK074366	-193919	+	AK131232 AX721156 NM_175888 AK093599 AX748220 TSC_hg19_v1_chr3_+_40547598	-212737	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	480628	+	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	480703	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	1243238	-	BC101619|ZNF621|285268|zinc finger protein 621##BC113415|ZNF621|285268|zinc finger protein 621##CR749268|ZNF621|285268|zinc finger protein 621##AK127181|ZNF621|285268|zinc finger protein 621##NM_001098414|ZNF621|285268|zinc finger protein 621##NM_198484|ZNF621|285268|zinc finger protein 621##AK074366|ZNF621|285268|zinc finger protein 621##AK131232|ZNF620|253639|zinc finger protein 620##NM_175888|ZNF620|253639|zinc finger protein 620##AK093599|ZNF620|253639|zinc finger protein 620##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)	0.0	
chrX	85426520	85426659	reg1029155.p2	4.645	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	-23124	+	TSC_hg19_v1_chrX_+_85403454 AK290596 NM_001139514 NM_053281	-23137	+	AK299323 BC032237 BC130494 BC130496 AK291160 AK312443 NM_000390 NM_001145414 X78121	-124038	-	AK055953 AK298787 NM_001139515	91381	+	NM_019117 NM_057162 AK056457 AB051474 BC161675 AL832514 AF284765 AF284766 BC140839 BC140840 BC142652 BC146677 AB385497	1346216	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	2575651	+	AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)##AK290596|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139514|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_053281|DACH2|117154|dachshund homolog 2 (Drosophila)##AK299323|CHM|1121|choroideremia (Rab escort protein 1)##BC032237|CHM|1121|choroideremia (Rab escort protein 1)##BC130494|CHM|1121|choroideremia (Rab escort protein 1)##BC130496|CHM|1121|choroideremia (Rab escort protein 1)##AK291160|CHM|1121|choroideremia (Rab escort protein 1)##AK312443|CHM|1121|choroideremia (Rab escort protein 1)##NM_000390|CHM|1121|choroideremia (Rab escort protein 1)##NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)##X78121|CHM|1121|choroideremia (Rab escort protein 1)##AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)##NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)##AK056457|KLHL4|56062|kelch-like 4 (Drosophila)##AB051474|KLHL4|56062|kelch-like 4 (Drosophila)##BC161675|KLHL4|56062|kelch-like 4 (Drosophila)##AL832514|KLHL4|56062|kelch-like 4 (Drosophila)##AF284765|KLHL4|56062|kelch-like 4 (Drosophila)##AF284766|KLHL4|56062|kelch-like 4 (Drosophila)##BC140839|KLHL4|56062|kelch-like 4 (Drosophila)##BC140840|KLHL4|56062|kelch-like 4 (Drosophila)##BC142652|KLHL4|56062|kelch-like 4 (Drosophila)##BC146677|KLHL4|56062|kelch-like 4 (Drosophila)##NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1	0.0	
chr1	28441830	28441989	reg1024377.p1	4.644	+	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-26785	-	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-155391	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-180348	+	NM_000952 NM_001164723	61545	-	S52624 AK292053 NM_001164721 NM_001164722	78503	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	117622	-	BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8	0.0	
chr12	9185318	9185436	reg1030557.p1	4.644	+	AK316337 BC012621 AK301367 AF081675 AF097358 NM_005810 AF034952 DQ892820 DQ896066	-43194	+	TSC_hg19_v1_chr12_-_9102262 NM_001207024 NM_002355	-83068	-	TSC_hg19_v1_chr12_-_9102242 AK291143 M16985 AK222792 BC024206 AK312689	-83159	-	TSC_hg19_v1_chr12_-_9268457 AB384991 AK307832 AK312482 AB209614	83079	-	TSC_hg19_v1_chr12_-_9268510 M11313 BC040071 AY591530	83116	-	BC026246 TSC_hg19_v1_chr12_-_9268516 BX647329 CR749334	83139	-	AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##NM_001207024|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##NM_002355|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK291143|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##M16985|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK222792|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##BC024206|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK312689|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK307832|A2M|2|alpha-2-macroglobulin##AK312482|A2M|2|alpha-2-macroglobulin##AB209614|A2M|2|alpha-2-macroglobulin##M11313|A2M|2|alpha-2-macroglobulin##BC040071|A2M|2|alpha-2-macroglobulin##AY591530|A2M|2|alpha-2-macroglobulin##BC026246|A2M|2|alpha-2-macroglobulin##BX647329|A2M|2|alpha-2-macroglobulin##CR749334|A2M|2|alpha-2-macroglobulin	0.0	
chr1	32715596	32715776	reg1025889.p1	4.644	+	NM_032648 BC004269	-2861	+	TSC_hg19_v1_chr1_-_32707234 AL833686 AK055560	-8431	-	TSC_hg19_v1_chr1_+_32688054 AB590351 BC003140 BT019597 CU678398 DQ891249 DQ894600	-27591	+	NM_005356 TSC_hg19_v1_chr1_+_32716847 AK098027 X05027 U23852 M36881 X13529	1199	+	NM_001042771 BC013200 AK303073 U07236 CU680550 DQ891675 DQ894861 AB527809 AJ865079 AF228313	24154	+	AK225555 TSC_hg19_v1_chr1_+_32757704 AK296308 AK313061	42017	+	NM_032648|FAM167B|84734|family with sequence similarity 167, member B##BC004269|FAM167B|84734|family with sequence similarity 167, member B##AL833686|MTMR9LP|339483|myotubularin related protein 9-like, pseudogene##AK055560|MTMR9LP|339483|myotubularin related protein 9-like, pseudogene##BC003140|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##BT019597|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##DQ891249|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##DQ894600|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##NM_005356|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK098027|LCK|3932|lymphocyte-specific protein tyrosine kinase##X05027|LCK|3932|lymphocyte-specific protein tyrosine kinase##U23852|LCK|3932|lymphocyte-specific protein tyrosine kinase##M36881|LCK|3932|lymphocyte-specific protein tyrosine kinase##X13529|LCK|3932|lymphocyte-specific protein tyrosine kinase##NM_001042771|LCK|3932|lymphocyte-specific protein tyrosine kinase##BC013200|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK303073|LCK|3932|lymphocyte-specific protein tyrosine kinase##U07236|LCK|3932|lymphocyte-specific protein tyrosine kinase##DQ891675|LCK|3932|lymphocyte-specific protein tyrosine kinase##DQ894861|LCK|3932|lymphocyte-specific protein tyrosine kinase##AJ865079|LCK|3932|lymphocyte-specific protein tyrosine kinase##AF228313|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK225555|HDAC1|3065|histone deacetylase 1##AK296308|HDAC1|3065|histone deacetylase 1##AK313061|HDAC1|3065|histone deacetylase 1	0.0	
chr19	4363278	4363350	reg1033991.p1	4.644	+	NM_001159846 NM_032868 AK027887 AK308468 TSC_hg19_v1_chr19_+_4343562 BC032652	-19755	+	TSC_hg19_v1_chr19_-_4342718 AK125774	-20564	-	AB527779 TSC_hg19_v1_chr19_-_4338790 BC000795 AJ245719 AK000241 NM_001013841 NM_017720	-24516	-	TSC_hg19_v1_chr19_-_4400419 AY364240 CR542087 AB527297 DQ891258 DQ894444 U65999 X99656 AK097616 NM_001199944	37079	-	BC001270 TSC_hg19_v1_chr19_-_4400513 AK315450 BC098565 AK299166 NM_001199943 NM_003025	37239	-	BC067093 NM_005483 BC052620 TSC_hg19_v1_chr19_+_4402664 BC041606 AB527824 U20979 BC005813 BC011560	39402	+	NM_001159846|MPND|84954|MPN domain containing##NM_032868|MPND|84954|MPN domain containing##AK027887|MPND|84954|MPN domain containing##AK308468|MPND|84954|MPN domain containing##BC032652|MPND|84954|MPN domain containing##AK125774|STAP2|55620|signal transducing adaptor family member 2##BC000795|STAP2|55620|signal transducing adaptor family member 2##AJ245719|STAP2|55620|signal transducing adaptor family member 2##AK000241|STAP2|55620|signal transducing adaptor family member 2##NM_001013841|STAP2|55620|signal transducing adaptor family member 2##NM_017720|STAP2|55620|signal transducing adaptor family member 2##AY364240|SH3GL1|6455|SH3-domain GRB2-like 1##CR542087|SH3GL1|6455|SH3-domain GRB2-like 1##DQ891258|SH3GL1|6455|SH3-domain GRB2-like 1##DQ894444|SH3GL1|6455|SH3-domain GRB2-like 1##U65999|SH3GL1|6455|SH3-domain GRB2-like 1##X99656|SH3GL1|6455|SH3-domain GRB2-like 1##AK097616|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199944|SH3GL1|6455|SH3-domain GRB2-like 1##BC001270|SH3GL1|6455|SH3-domain GRB2-like 1##AK315450|SH3GL1|6455|SH3-domain GRB2-like 1##BC098565|SH3GL1|6455|SH3-domain GRB2-like 1##AK299166|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199943|SH3GL1|6455|SH3-domain GRB2-like 1##NM_003025|SH3GL1|6455|SH3-domain GRB2-like 1##BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	0.034839	
chr2	127644010	127644115	reg1026160.p1	4.644	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-230270	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-230355	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2861198	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	220679	-	BC039307 NM_001001665	319280	-	AK131190 TSC_hg19_v1_chr2_-_127977781	333655	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.167885	
chr3	149957052	149957148	reg1012508.p2	4.644	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-268020	+	TSC_hg19_v1_chr3_-_149688960 BC043646	-268171	-	TSC_hg19_v1_chr3_-_149688683 AB464068 AF228738 EU832616 EU832688 AK311782 L10678 BC002964 BC095444 AK307227 AK311780 BC018049 AK297915 NM_002628 NM_053024	-268404	-	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	168972	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	169663	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	306870	-	BC012363|LOC646903|646903|uncharacterized LOC646903##BC043646|PFN2|5217|profilin 2##AF228738|PFN2|5217|profilin 2##EU832616|PFN2|5217|profilin 2##EU832688|PFN2|5217|profilin 2##AK311782|PFN2|5217|profilin 2##L10678|PFN2|5217|profilin 2##BC002964|PFN2|5217|profilin 2##BC095444|PFN2|5217|profilin 2##AK307227|PFN2|5217|profilin 2##AK311780|PFN2|5217|profilin 2##BC018049|PFN2|5217|profilin 2##AK297915|PFN2|5217|profilin 2##NM_002628|PFN2|5217|profilin 2##NM_053024|PFN2|5217|profilin 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.949496	
chr3	83977682	83977798	reg1032591.p1	4.644	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-1942438	+	TSC_hg19_v1_chr3_-_81810971 NM_000158	-2166798	-	TSC_hg19_v1_chr3_-_81810866 AB209731 BC012098	-2166892	-	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	1030389	+	AF538973 NM_153184	1797891	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	3062511	-	NM_000158|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB209731|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##BC012098|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)	0.996282	CTCF.p2:-5:0.996
chr4	159937812	159937965	reg1035164.p1	4.644	+	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-247603	+	TSC_hg19_v1_chr4_+_159690177 NM_020840	-247710	+	AB528445 CR542081 DQ891562 DQ894749 TSC_hg19_v1_chr4_-_159644545 BC014893 L11667 BC030707 AK313929 NM_005038	-293360	-	AK058100 NM_152543	18444	-	AK294459 NM_014247	251109	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	3147263	-	AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##NM_020840|FNIP2|57600|folliculin interacting protein 2##CR542081|PPID|5481|peptidylprolyl isomerase D##DQ891562|PPID|5481|peptidylprolyl isomerase D##DQ894749|PPID|5481|peptidylprolyl isomerase D##BC014893|PPID|5481|peptidylprolyl isomerase D##L11667|PPID|5481|peptidylprolyl isomerase D##BC030707|PPID|5481|peptidylprolyl isomerase D##AK313929|PPID|5481|peptidylprolyl isomerase D##NM_005038|PPID|5481|peptidylprolyl isomerase D##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5	0.650277	CTCF.p2:-95:0.582
chr12	107798943	107799029	reg1032012.p2	4.643	+	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	-86773	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-311376	-	BC030519 TSC_hg19_v1_chr12_-_107487328 D83702	-311653	-	AK127295 NM_001017523	175647	+	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	280681	+	AK056378 TSC_hg19_v1_chr12_-_108154899	355853	-	BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##BC030519|CRY1|1407|cryptochrome 1 (photolyase-like)##D83702|CRY1|1407|cryptochrome 1 (photolyase-like)##AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK056378|PRDM4|11108|PR domain containing 4	0.548171	CTCF.p2:-18:0.514
chr12	88547891	88547992	reg1023860.p1	4.643	+	TSC_hg19_v1_chr12_+_88536083 AK290436 AK302755 AK310375 AK310393 NM_181783 CR749309 BX538169 CR749244 CR933632 AJ697717 BC117177 BC117175	-11793	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	-12072	-	TSC_hg19_v1_chr12_+_88429312 AK095477 NM_001009894 CR936776 AK311222 BC058014 BX640968 BX537868 BX648026 AK311153 BC035136 BC092422 AB590923 AM392924 AL137488	-118555	+	BC074725 AK293002 AF119835 AF400437 BC126166 BC143899 BC069797 BC069733 BC069783 TSC_hg19_v1_chr12_-_88974249 AF400436 M59964 AK290319 NM_000899 NM_003994	426231	-	TSC_hg19_v1_chr12_+_89744716 AK124265	1196811	+	TSC_hg19_v1_chr12_-_89745782 AB451265 AB451393 BT006895 CU678402 AB463588 DQ892490 DQ895701	1197844	-	AK290436|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK302755|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310375|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310393|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##NM_181783|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749309|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BX538169|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749244|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR933632|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AJ697717|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117177|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117175|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa##AK095477|C12orf29|91298|chromosome 12 open reading frame 29##NM_001009894|C12orf29|91298|chromosome 12 open reading frame 29##CR936776|C12orf29|91298|chromosome 12 open reading frame 29##AK311222|C12orf29|91298|chromosome 12 open reading frame 29##BC058014|C12orf29|91298|chromosome 12 open reading frame 29##BX640968|C12orf29|91298|chromosome 12 open reading frame 29##BX537868|C12orf29|91298|chromosome 12 open reading frame 29##BX648026|C12orf29|91298|chromosome 12 open reading frame 29##AK311153|C12orf29|91298|chromosome 12 open reading frame 29##BC035136|C12orf29|91298|chromosome 12 open reading frame 29##BC092422|C12orf29|91298|chromosome 12 open reading frame 29##AM392924|C12orf29|91298|chromosome 12 open reading frame 29##AL137488|C12orf29|91298|chromosome 12 open reading frame 29##BC074725|KITLG|4254|KIT ligand##AK293002|KITLG|4254|KIT ligand##AF119835|KITLG|4254|KIT ligand##AF400437|KITLG|4254|KIT ligand##BC126166|KITLG|4254|KIT ligand##BC143899|KITLG|4254|KIT ligand##BC069797|KITLG|4254|KIT ligand##BC069733|KITLG|4254|KIT ligand##BC069783|KITLG|4254|KIT ligand##AF400436|KITLG|4254|KIT ligand##M59964|KITLG|4254|KIT ligand##AK290319|KITLG|4254|KIT ligand##NM_000899|KITLG|4254|KIT ligand##NM_003994|KITLG|4254|KIT ligand##AK124265|LOC100131490|100131490|uncharacterized LOC100131490##AB451265|DUSP6|1848|dual specificity phosphatase 6##AB451393|DUSP6|1848|dual specificity phosphatase 6##BT006895|DUSP6|1848|dual specificity phosphatase 6##DQ892490|DUSP6|1848|dual specificity phosphatase 6##DQ895701|DUSP6|1848|dual specificity phosphatase 6	0.985084	CTCF.p2:-13:0.985
chr17	78193324	78193438	reg1028896.p1	4.643	+	BC001326 NM_052819	-31783	+	AF322642 NM_024110 BC018142	-41093	+	CR456750 CU678566 AB383751 X79538 BC003662 BC004386 BC011151 TSC_hg19_v1_chr17_-_78120947 AK290608 NM_014740	-72511	-	TSC_hg19_v1_chr17_-_78194133 CU690396 U30894 AB209900 BC047318 AK222890 AK291257 AK304706 AK309927 AK095969 NM_000199	760	-	TSC_hg19_v1_chr17_+_78194101 NM_001166347 NM_001166348 NM_001166349 NM_173626 AJ544073 AK027293 AK075248 AK315132 AL833468 BC035900 AF345195	797	+	TSC_hg19_v1_chr17_+_78234657 AB537889 BC036891 NM_020914 NM_020954 AL832920 BC040341 AF397204 AF397205	41304	+	BC001326|CARD14|79092|caspase recruitment domain family, member 14##NM_052819|CARD14|79092|caspase recruitment domain family, member 14##AF322642|CARD14|79092|caspase recruitment domain family, member 14##NM_024110|CARD14|79092|caspase recruitment domain family, member 14##BC018142|CARD14|79092|caspase recruitment domain family, member 14##CR456750|EIF4A3|9775|eukaryotic translation initiation factor 4A3##X79538|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC003662|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC004386|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC011151|EIF4A3|9775|eukaryotic translation initiation factor 4A3##AK290608|EIF4A3|9775|eukaryotic translation initiation factor 4A3##NM_014740|EIF4A3|9775|eukaryotic translation initiation factor 4A3##U30894|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AB209900|SGSH|6448|N-sulfoglucosamine sulfohydrolase##BC047318|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK222890|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK291257|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK304706|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK309927|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK095969|SGSH|6448|N-sulfoglucosamine sulfohydrolase##NM_000199|SGSH|6448|N-sulfoglucosamine sulfohydrolase##NM_001166347|SLC26A11|284129|solute carrier family 26, member 11##NM_001166348|SLC26A11|284129|solute carrier family 26, member 11##NM_001166349|SLC26A11|284129|solute carrier family 26, member 11##NM_173626|SLC26A11|284129|solute carrier family 26, member 11##AJ544073|SLC26A11|284129|solute carrier family 26, member 11##AK027293|SLC26A11|284129|solute carrier family 26, member 11##AK075248|SLC26A11|284129|solute carrier family 26, member 11##AK315132|SLC26A11|284129|solute carrier family 26, member 11##AL833468|SLC26A11|284129|solute carrier family 26, member 11##BC035900|SLC26A11|284129|solute carrier family 26, member 11##AF345195|SLC26A11|284129|solute carrier family 26, member 11##AB537889|RNF213|57674|ring finger protein 213##BC036891|RNF213|57674|ring finger protein 213##NM_020914|RNF213|57674|ring finger protein 213##NM_020954|RNF213|57674|ring finger protein 213##AL832920|RNF213|57674|ring finger protein 213##BC040341|RNF213|57674|ring finger protein 213##AF397204|RNF213|57674|ring finger protein 213##AF397205|RNF213|57674|ring finger protein 213	0.0	
chr5	41755108	41755212	reg1030417.p2	4.643	+	AB464014 TSC_hg19_v1_chr5_-_41510701 AK127142 BX648329 NM_001005473	-244482	-	BC035723 NM_001115131	-493621	-	J05024 J04506 AK292509 TSC_hg19_v1_chr5_-_41213635 J05064 AK313673 NM_000065	-541571	-	AB528366 CR457049 CU679223 DQ891805 DQ894989 TSC_hg19_v1_chr5_-_41870488 AK312327	115314	-	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	115423	-	TSC_hg19_v1_chr5_-_41870706 NM_000436	115586	-	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BC035723|C6|729|complement component 6##NM_001115131|C6|729|complement component 6##J05024|C6|729|complement component 6##J04506|C6|729|complement component 6##AK292509|C6|729|complement component 6##J05064|C6|729|complement component 6##AK313673|C6|729|complement component 6##NM_000065|C6|729|complement component 6##CR457049|OXCT1|5019|3-oxoacid CoA transferase 1##DQ891805|OXCT1|5019|3-oxoacid CoA transferase 1##DQ894989|OXCT1|5019|3-oxoacid CoA transferase 1##AK312327|OXCT1|5019|3-oxoacid CoA transferase 1##BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1	0.984577	CTCF.p2:-11:0.985
chr8	43303242	43303372	reg1028405.p2	4.643	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	-155702	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-307660	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-307674	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	4870188	+	TSC_hg19_v1_chr8_+_48173521 AK303579	4870212	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	4870225	+	AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146	0.0	
chr1	39732044	39732155	reg1026058.p1	4.642	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-185011	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	-240091	+	TSC_hg19_v1_chr1_+_39456956 NM_001136275 NM_024595 AK022728 AK092624 AX747634 AK124799 AK126262 AK223276 AK298890 AK303098 BC001498 BC119745 BC119746 AY326465	-275037	+	NM_015038	143076	+	TSC_hg19_v1_chr1_+_39922264 AK023821	190220	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	225246	+	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_001136275|AKIRIN1|79647|akirin 1##NM_024595|AKIRIN1|79647|akirin 1##AK022728|AKIRIN1|79647|akirin 1##AK092624|AKIRIN1|79647|akirin 1##AK124799|AKIRIN1|79647|akirin 1##AK126262|AKIRIN1|79647|akirin 1##AK223276|AKIRIN1|79647|akirin 1##AK298890|AKIRIN1|79647|akirin 1##AK303098|AKIRIN1|79647|akirin 1##BC001498|AKIRIN1|79647|akirin 1##BC119745|AKIRIN1|79647|akirin 1##BC119746|AKIRIN1|79647|akirin 1##AY326465|AKIRIN1|79647|akirin 1##NM_015038|KIAA0754|643314|KIAA0754##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a	0.460045	CTCF.p2:6:0.460
chr14	75372781	75372864	reg1037051.p1	4.642	+	TSC_hg19_v1_chr14_+_75348624 NM_001244883 NM_001933 AK289414 BX248276 AK299505 AK316463 AK300396 BC000302 BC001922 BC002735 BX248764 D16373 CR456727 CU674146 L37418 BX248774	-24197	+	BC105720 BC105721 BC105927 NM_001080408 NM_001243007	-42287	-	TSC_hg19_v1_chr14_+_75283667 BC023570	-89122	+	NM_031464	16322	-	TSC_hg19_v1_chr14_-_75389964 BC036574 AK226137 AK054800	17131	-	BX248289 NM_001207012 NM_002632	49644	-	NM_001244883|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##NM_001933|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK289414|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248276|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK299505|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK316463|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK300396|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC000302|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC001922|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC002735|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248764|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##D16373|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##CR456727|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##L37418|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248774|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC105720|PROX2|283571|prospero homeobox 2##BC105721|PROX2|283571|prospero homeobox 2##BC105927|PROX2|283571|prospero homeobox 2##NM_001080408|PROX2|283571|prospero homeobox 2##NM_001243007|PROX2|283571|prospero homeobox 2##BC023570|YLPM1|56252|YLP motif containing 1##NM_031464|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##BC036574|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK226137|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK054800|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##BX248289|PGF|5228|placental growth factor##NM_001207012|PGF|5228|placental growth factor##NM_002632|PGF|5228|placental growth factor	0.0	
chr15	73014656	73014748	reg1012177.p2	4.642	+	NM_001252678 NM_033028 TSC_hg19_v1_chr15_+_72978547 AK303706 AF359281 AK298922 AK314507 BX647855 BC027624 AK075321 AK302224 AB528022 DQ891519 DQ894709	-36159	+	NM_018652	-67665	+	TSC_hg19_v1_chr15_+_72766706 AB209432 BC051877	-247986	+	BC037410 TSC_hg19_v1_chr15_-_73051778	37012	-	TSC_hg19_v1_chr15_-_73076054 CU675251 EU831454 EU831541 BC018074	61338	-	TSC_hg19_v1_chr15_-_73076058 AK075560 AK293282	61357	-	NM_001252678|BBS4|585|Bardet-Biedl syndrome 4##NM_033028|BBS4|585|Bardet-Biedl syndrome 4##AK303706|BBS4|585|Bardet-Biedl syndrome 4##AF359281|BBS4|585|Bardet-Biedl syndrome 4##AK298922|BBS4|585|Bardet-Biedl syndrome 4##AK314507|BBS4|585|Bardet-Biedl syndrome 4##BX647855|BBS4|585|Bardet-Biedl syndrome 4##BC027624|BBS4|585|Bardet-Biedl syndrome 4##AK075321|BBS4|585|Bardet-Biedl syndrome 4##AK302224|BBS4|585|Bardet-Biedl syndrome 4##DQ891519|BBS4|585|Bardet-Biedl syndrome 4##DQ894709|BBS4|585|Bardet-Biedl syndrome 4##NM_018652|GOLGA6B|55889|golgin A6 family, member B##AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##EU831454|ADPGK|83440|ADP-dependent glucokinase##EU831541|ADPGK|83440|ADP-dependent glucokinase##BC018074|ADPGK|83440|ADP-dependent glucokinase##AK075560|ADPGK|83440|ADP-dependent glucokinase##AK293282|ADPGK|83440|ADP-dependent glucokinase	0.926237	
chr16	70464548	70464728	reg1020737.p2	4.642	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-83810	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-131490	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-131562	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	8343	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	23861	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	38202	+	AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##AK096727|FUK|197258|fucokinase	0.0	
chr17	12933862	12934010	reg1026713.p2	4.642	+	TSC_hg19_v1_chr17_-_12921332 AK001392 NM_001165962 NM_018127 NM_173717	-12580	-	TSC_hg19_v1_chr17_-_12921325 AK298397 AK094687 BC001939 BC004158	-12617	-	TSC_hg19_v1_chr17_-_12921295 AK300011 AF304370 CR457261 CU674942	-12660	-	AY358838 TSC_hg19_v1_chr17_-_13505228 AF105376 NM_006042 AK292047	571301	-	TSC_hg19_v1_chr17_-_13972756 AK123100	1038826	-	NM_001303 TSC_hg19_v1_chr17_+_13972839 AK312718	1038843	+	AK001392|ELAC2|60528|elaC homolog 2 (E. coli)##NM_001165962|ELAC2|60528|elaC homolog 2 (E. coli)##NM_018127|ELAC2|60528|elaC homolog 2 (E. coli)##NM_173717|ELAC2|60528|elaC homolog 2 (E. coli)##AK298397|ELAC2|60528|elaC homolog 2 (E. coli)##AK094687|ELAC2|60528|elaC homolog 2 (E. coli)##BC001939|ELAC2|60528|elaC homolog 2 (E. coli)##BC004158|ELAC2|60528|elaC homolog 2 (E. coli)##AK300011|ELAC2|60528|elaC homolog 2 (E. coli)##AF304370|ELAC2|60528|elaC homolog 2 (E. coli)##CR457261|ELAC2|60528|elaC homolog 2 (E. coli)##AY358838|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AF105376|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_006042|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AK292047|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_001303|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK312718|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	0.996261	CTCF.p2:-7:0.996
chr6	33640693	33640843	reg1027603.p1	4.642	+	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	-51574	+	TSC_hg19_v1_chr6_-_33548037 AK303422 AK293547 NM_001188	-92725	-	U23765 U16811 TSC_hg19_v1_chr6_-_33547998 X84213 BC004431 BC032789 BC110337 AK091807 AK292093	-92853	-	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	38695	-	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	38745	-	AK056586 AK223572 AK289935 BC089389 NM_001142883 NM_054111	73953	-	D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##AK303422|BAK1|578|BCL2-antagonist/killer 1##AK293547|BAK1|578|BCL2-antagonist/killer 1##NM_001188|BAK1|578|BCL2-antagonist/killer 1##U23765|BAK1|578|BCL2-antagonist/killer 1##U16811|BAK1|578|BCL2-antagonist/killer 1##X84213|BAK1|578|BCL2-antagonist/killer 1##BC004431|BAK1|578|BCL2-antagonist/killer 1##BC032789|BAK1|578|BCL2-antagonist/killer 1##BC110337|BAK1|578|BCL2-antagonist/killer 1##AK091807|BAK1|578|BCL2-antagonist/killer 1##AK292093|BAK1|578|BCL2-antagonist/killer 1##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125##AK056586|IP6K3|117283|inositol hexakisphosphate kinase 3##AK223572|IP6K3|117283|inositol hexakisphosphate kinase 3##AK289935|IP6K3|117283|inositol hexakisphosphate kinase 3##BC089389|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_001142883|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_054111|IP6K3|117283|inositol hexakisphosphate kinase 3	0.590701	CTCF.p2:-39:0.549
chr8	120780124	120780270	reg1028581.p1	4.642	+	EU131011 DQ891628 DQ894819 D45421 L35594 AK315253 BC034961 TSC_hg19_v1_chr8_-_120651080 NM_001040092 NM_001130863 NM_006209	-129135	-	NM_002514 AK294289 AK312355 TSC_hg19_v1_chr8_+_120428685 AY082381 X96584 BC015028 CU677181 AB463923 DQ891179 DQ894361 CR457432	-351536	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	-559558	+	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	64880	-	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	87917	-	NM_022783 TSC_hg19_v1_chr8_+_120885965 AK315175 AK225168 AK297822 AL136678 AK225675 BC024746 AK022490 BC012040 AM392576 AM393333 AB527130 AK023916	105807	+	EU131011|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ891628|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ894819|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##D45421|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##L35594|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##AK315253|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC034961|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001040092|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001130863|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_006209|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_002514|NOV|4856|nephroblastoma overexpressed gene##AK294289|NOV|4856|nephroblastoma overexpressed gene##AK312355|NOV|4856|nephroblastoma overexpressed gene##AY082381|NOV|4856|nephroblastoma overexpressed gene##X96584|NOV|4856|nephroblastoma overexpressed gene##BC015028|NOV|4856|nephroblastoma overexpressed gene##DQ891179|NOV|4856|nephroblastoma overexpressed gene##DQ894361|NOV|4856|nephroblastoma overexpressed gene##CR457432|NOV|4856|nephroblastoma overexpressed gene##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein	0.977557	CTCF.p2:-16:0.978
chr8	137529515	137529665	reg1024263.p1	4.642	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-1059389	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-1059932	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1804316	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	1979516	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2396654	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3185692	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.0	
chr12	105715126	105715260	reg1029215.p2	4.641	+	CU689714 AB527678 DQ892107 DQ895301 TSC_hg19_v1_chr12_-_105629989 AK001521 AK290562 AK297100 BC033731 BC028008 AY113704 NM_001251904 NM_018171	-85283	-	NM_001251905	-88011	-	TSC_hg19_v1_chr12_+_105501556 AB385420	-213626	+	TSC_hg19_v1_chr12_+_105724468 BC013920 NM_001145199 BC067897 BC045812 BC061920 AK056999 AJ311377	9278	+	AJ311378 TSC_hg19_v1_chr12_+_105724640	9446	+	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	817489	-	DQ892107|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##DQ895301|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK001521|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK290562|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK297100|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC033731|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC028008|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AY113704|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251904|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_018171|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251905|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC013920|C12orf75|387882|chromosome 12 open reading frame 75##NM_001145199|C12orf75|387882|chromosome 12 open reading frame 75##BC067897|C12orf75|387882|chromosome 12 open reading frame 75##BC045812|C12orf75|387882|chromosome 12 open reading frame 75##BC061920|C12orf75|387882|chromosome 12 open reading frame 75##AK056999|C12orf75|387882|chromosome 12 open reading frame 75##AJ311377|C12orf75|387882|chromosome 12 open reading frame 75##AJ311378|C12orf75|387882|chromosome 12 open reading frame 75##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1	0.0	
chr15	29615312	29615424	reg1043914.p1	4.641	+	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	-53339	-	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	-53398	-	NM_001130414 NM_005503 AF047348 BC082986	-401519	+	NM_015307	247558	-	AK304758 TSC_hg19_v1_chr15_-_30114336	498974	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	499255	-	AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)	0.0	
chr15	85471330	85471511	reg1000290.p1	4.641	+	AK291997 AK296075 AK298369 AK296074 AK296119 AK309571 AK311387 AK309578 AF309632 NM_004213 NM_201651 BC029788	-43509	+	AY044449 NM_020778	-111510	+	TSC_hg19_v1_chr15_+_85291875 BC094688	-179558	+	TSC_hg19_v1_chr15_+_85523735 BC060762 AK074280 NM_001243137	52282	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	53817	+	BC075822 TSC_hg19_v1_chr15_+_85525333	53906	+	AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AY044449|ALPK3|57538|alpha-kinase 3##NM_020778|ALPK3|57538|alpha-kinase 3##BC094688|ZNF592|9640|zinc finger protein 592##BC060762|PDE8A|5151|phosphodiesterase 8A##AK074280|PDE8A|5151|phosphodiesterase 8A##NM_001243137|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A	0.0	
chr16	72275890	72276025	reg1029680.p2	4.641	+	AK122925 NM_001160213	-69609	-	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	-69914	-	NM_001142318	-147743	-	TSC_hg19_v1_chr16_+_72699031 AK021563	423107	+	TSC_hg19_v1_chr16_-_72991733 BC029653	715748	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	806264	-	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001142318|TXNL4B|54957|thioredoxin-like 4B##BC029653|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3	0.0	
chr22	18402985	18403103	reg1031101.p2	4.641	+	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-145710	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-145821	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	-145837	-	TSC_hg19_v1_chr22_-_18484268 AK127487	81184	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	104217	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	157644	+	BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26	0.0	
chr6	149415377	149415479	reg1031200.p2	4.641	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-347219	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-751237	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-751438	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	223675	+	AK315038 NM_015093 AK307650	224013	+	AY340238 NM_001002255 BC130305 HQ258040	306080	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr10	105881503	105881630	reg1031602.p1	4.640	+	BC004478 D63465 TSC_hg19_v1_chr10_-_105845639 NM_000494	-35937	-	AK300117 TSC_hg19_v1_chr10_-_105845560 M91669 AK300226 AK309940	-35997	-	AF273048 NM_014720 BC111565 BC008697	-154079	+	NM_145247 BC140835 NM_001002759 BC043256 AK291184	343	+	AL136901 TSC_hg19_v1_chr10_-_105992103 AK026597 AK295018 BC071565 BC036647 NM_025145	110528	-	NM_001191003	132385	+	BC004478|COL17A1|1308|collagen, type XVII, alpha 1##D63465|COL17A1|1308|collagen, type XVII, alpha 1##NM_000494|COL17A1|1308|collagen, type XVII, alpha 1##M91669|COL17A1|1308|collagen, type XVII, alpha 1##AK309940|COL17A1|1308|collagen, type XVII, alpha 1##AF273048|SLK|9748|STE20-like kinase##NM_014720|SLK|9748|STE20-like kinase##BC111565|SLK|9748|STE20-like kinase##BC008697|SLK|9748|STE20-like kinase##NM_145247|SFR1|119392|SWI5-dependent recombination repair 1##BC140835|SFR1|119392|SWI5-dependent recombination repair 1##NM_001002759|SFR1|119392|SWI5-dependent recombination repair 1##BC043256|SFR1|119392|SWI5-dependent recombination repair 1##AK291184|SFR1|119392|SWI5-dependent recombination repair 1##AL136901|WDR96|80217|WD repeat domain 96##AK026597|WDR96|80217|WD repeat domain 96##AK295018|WDR96|80217|WD repeat domain 96##BC071565|WDR96|80217|WD repeat domain 96##BC036647|WDR96|80217|WD repeat domain 96##NM_025145|WDR96|80217|WD repeat domain 96##NM_001191003|GSTO1|9446|glutathione S-transferase omega 1	0.0	
chr20	47016530	47016680	reg1031320.p1	4.640	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-601287	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-601853	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-885921	+	AB037836 TSC_hg19_v1_chr20_-_47444291	427681	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	427834	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	521713	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr21	42734341	42734521	reg1026816.p2	4.640	+	TSC_hg19_v1_chr21_+_42733956 M30818 NM_002463 AK308060 AK126107	-493	+	AK125528 NM_058186 NM_206964 TSC_hg19_v1_chr21_+_42688738 BC057829 AF375989 AJ409094 AY040086 AY358459 HQ257913 AF494379	-45698	+	AK302095 BC036314 TSC_hg19_v1_chr21_+_42676236	-58225	+	TSC_hg19_v1_chr21_+_42742025 AK298780	7588	+	AK096355 NM_001144925	58049	+	NM_002462 TSC_hg19_v1_chr21_+_42798165 AK225885 AK315465 NM_001178046 M33882 BC052255	63663	+	M30818|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##NM_002463|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK308060|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK126107|LOC100131190|100131190|uncharacterized LOC100131190##AK125528|FAM3B|54097|family with sequence similarity 3, member B##NM_058186|FAM3B|54097|family with sequence similarity 3, member B##NM_206964|FAM3B|54097|family with sequence similarity 3, member B##BC057829|FAM3B|54097|family with sequence similarity 3, member B##AF375989|FAM3B|54097|family with sequence similarity 3, member B##AJ409094|FAM3B|54097|family with sequence similarity 3, member B##AY040086|FAM3B|54097|family with sequence similarity 3, member B##AY358459|FAM3B|54097|family with sequence similarity 3, member B##HQ257913|FAM3B|54097|family with sequence similarity 3, member B##AF494379|FAM3B|54097|family with sequence similarity 3, member B##BC036314|FAM3B|54097|family with sequence similarity 3, member B##AK298780|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK096355|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001144925|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_002462|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK225885|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK315465|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001178046|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##M33882|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##BC052255|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)	0.0	
chr22	16200140	16200271	reg1029808.p1	4.640	+	None	None	None	None	None	None	None	None	None	BC127623 AY465171 AY465172 AY466021 NM_001136213	87721	-	NM_001005239	249598	-	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	873364	-	BC127623|POTEG|404785|POTE ankyrin domain family, member G##AY465171|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##AY466021|POTEH|23784|POTE ankyrin domain family, member H##NM_001136213|POTEH|23784|POTE ankyrin domain family, member H##NM_001005239|OR11H1|81061|olfactory receptor, family 11, subfamily H, member 1##BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2	0.141898	
chr3	45385558	45385738	reg1031078.p1	4.640	+	TSC_hg19_v1_chr3_-_45267804 NM_015444	-117823	-	AB078417 AF438313 TSC_hg19_v1_chr3_-_45267780 BC057390	-117940	-	AL080235 TSC_hg19_v1_chr3_-_45267132	-118548	-	AK308146 BC025989 TSC_hg19_v1_chr3_+_45430067 D21851 NM_015340	44416	+	TSC_hg19_v1_chr3_+_45635397 M80651	249937	+	TSC_hg19_v1_chr3_+_45636176 BC117236 BC117238 NM_014240 AJ132408 HQ258355	250623	+	NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AL080235|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AK308146|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##BC025989|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##D21851|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015340|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##M80651|LIMD1|8994|LIM domains containing 1##BC117236|LIMD1|8994|LIM domains containing 1##BC117238|LIMD1|8994|LIM domains containing 1##NM_014240|LIMD1|8994|LIM domains containing 1##AJ132408|LIMD1|8994|LIM domains containing 1##HQ258355|LIMD1|8994|LIM domains containing 1	0.061823	
chr6	15962689	15962757	reg1024764.p2	4.640	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-299433	-	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	-299546	-	TSC_hg19_v1_chr6_+_15249113 AK303610	-713610	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	166579	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	166714	+	TSC_hg19_v1_chr6_+_16143281 AK026739	180587	+	NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein	0.0	
chr7	98030703	98030874	reg1005400.p2	4.640	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-355	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-494	-	TSC_hg19_v1_chr7_-_98015920 D28374	-14874	-	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	215948	+	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	436742	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	436839	-	NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##D28374|RPS3A|6189|ribosomal protein S3A##NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130	0.0	
chrX	144475347	144475460	reg1028318.p2	4.640	+	DQ336118 DQ336119 DQ336120 DQ336121 NM_001009614	-146297	+	GU727624 NM_001012989	-1508231	+	NM_001009615	-1670888	-	TSC_hg19_v1_chrX_+_144899439 NM_001144003 NM_001144004 NM_001144005 NM_032539 AK096278 CR627412 AK289732	424010	+	NM_001144006 NM_001144008 NM_001144009 NM_001144010 BC113011 BC113012 TSC_hg19_v1_chrX_+_144903056	427561	+	NM_004709 Y08902 BC113600 BC113604 HQ258719	433658	+	DQ336118|SPANXN1|494118|SPANX family, member N1##DQ336119|SPANXN1|494118|SPANX family, member N1##DQ336120|SPANXN1|494118|SPANX family, member N1##DQ336121|SPANXN1|494118|SPANX family, member N1##NM_001009614|SPANXN1|494118|SPANX family, member N1##GU727624|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like##NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like##NM_001009615|SPANXN2|494119|SPANX family, member N2##NM_001144003|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144004|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144005|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_032539|SLITRK2|84631|SLIT and NTRK-like family, member 2##AK096278|SLITRK2|84631|SLIT and NTRK-like family, member 2##CR627412|SLITRK2|84631|SLIT and NTRK-like family, member 2##AK289732|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144006|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144008|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144009|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144010|SLITRK2|84631|SLIT and NTRK-like family, member 2##BC113011|SLITRK2|84631|SLIT and NTRK-like family, member 2##BC113012|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_004709|CXorf1|9142|chromosome X open reading frame 1##Y08902|CXorf1|9142|chromosome X open reading frame 1##BC113600|CXorf1|9142|chromosome X open reading frame 1##BC113604|CXorf1|9142|chromosome X open reading frame 1##HQ258719|CXorf1|9142|chromosome X open reading frame 1	0.951812	CTCF.p2:-18:0.952
chr10	52107318	52107483	reg1030089.p2	4.639	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-99060	-	NM_018232	-269515	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-279678	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	276303	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	392310	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	537993	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.0	
chr16	85709270	85709387	reg1026018.p1	4.639	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	-62375	+	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	-64307	+	BC093665 BC111944 AK126284 NM_198491	-563274	-	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	13214	-	BC003186 NM_016095 TSC_hg19_v1_chr16_-_85722590	13271	-	TSC_hg19_v1_chr16_-_85784703 NM_206967	75360	-	NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC003186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_016095|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_206967|C16orf74|404550|chromosome 16 open reading frame 74	0.738836	CTCF.p2:29:0.739
chr7	28486464	28486561	reg1032321.p1	4.639	+	L05911 NM_004904	-11279	+	L05515 NM_182898	-34369	+	TSC_hg19_v1_chr7_+_28448986 BC087859	-37524	+	AK292916 TSC_hg19_v1_chr7_+_28530784	44253	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	239171	+	CU690330 TSC_hg19_v1_chr7_-_28997732	511185	-	L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##L05515|CREB5|9586|cAMP responsive element binding protein 5##NM_182898|CREB5|9586|cAMP responsive element binding protein 5##BC087859|LOC401317|401317|uncharacterized LOC401317##AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5	0.0	
chr7	3129247	3129370	reg1033129.p1	4.639	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	-45846	-	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-245500	-	AK289723 AB075830 BC146753 NM_133463	-410150	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	211691	+	TSC_hg19_v1_chr7_+_4721925 NM_001037165	1592530	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	1592943	+	AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##NM_001037165|FOXK1|221937|forkhead box K1##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1	0.0	
chr14	54080564	54080744	reg1026391.p2	4.638	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-460604	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-460686	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-460781	-	NM_130851	340615	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	342879	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	783067	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.0	
chr17	68626188	68626294	reg1030350.p1	4.638	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-460545	+	BC033038 NM_170742	-525247	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-554811	+	TSC_hg19_v1_chr17_-_70116937 AL833139	1490697	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	1490918	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	1490929	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.987649	CTCF.p2:20:0.988
chr2	97240231	97240363	reg1039471.p1	4.638	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	-37812	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-238761	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-238821	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	63722	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	63770	-	TSC_hg19_v1_chr2_-_97304084 AK023813 AY050169 AK304011 NM_001115016 NM_017991	63801	-	NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK023813|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AY050169|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK304011|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##NM_001115016|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##NM_017991|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.917747	CTCF.p2:20:0.918
chr6	127837983	127838064	reg1030123.p1	4.638	+	NM_014702	-57489	-	TSC_hg19_v1_chr6_-_127664710 AL834469 BC003549 AF220192 NM_001002030 NM_001105544 NM_001105545 NM_018479	-173301	-	TSC_hg19_v1_chr6_+_127664573 AK055024	-173462	+	NM_001012279	2476	-	AK303850 BC062712 NM_001010905	60295	+	AK292046 AK097903 BC144034 BC130516 NM_001010923 NM_001164685	384177	-	NM_014702|KIAA0408|9729|KIAA0408##AL834469|ECHDC1|55862|enoyl CoA hydratase domain containing 1##BC003549|ECHDC1|55862|enoyl CoA hydratase domain containing 1##AF220192|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001002030|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001105544|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001105545|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_018479|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001012279|C6orf174|387104|chromosome 6 open reading frame 174##AK303850|C6orf58|352999|chromosome 6 open reading frame 58##BC062712|C6orf58|352999|chromosome 6 open reading frame 58##NM_001010905|C6orf58|352999|chromosome 6 open reading frame 58##AK292046|THEMIS|387357|thymocyte selection associated##AK097903|THEMIS|387357|thymocyte selection associated##BC144034|THEMIS|387357|thymocyte selection associated##BC130516|THEMIS|387357|thymocyte selection associated##NM_001010923|THEMIS|387357|thymocyte selection associated##NM_001164685|THEMIS|387357|thymocyte selection associated	0.0	
chr7	116443063	116443148	reg1025990.p1	4.638	+	TSC_hg19_v1_chr7_+_116395441 BC127890	-47654	+	AK296974 TSC_hg19_v1_chr7_+_116364175	-78930	+	TSC_hg19_v1_chr7_+_116312490 EU176015 J02958 NM_000245 NM_001127500 X54559 DQ656040 BC130420 AK309532	-130633	+	TSC_hg19_v1_chr7_+_116451073 DQ655955 DQ655956	7993	+	TSC_hg19_v1_chr7_+_116502581 NM_006136	59452	+	AK314808 TSC_hg19_v1_chr7_+_116502591	59486	+	AK296974|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##EU176015|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##DQ655955|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##DQ655956|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2	0.817463	CTCF.p2:-4:0.817
chr9	114754909	114755090	reg1030071.p2	4.638	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-95532	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-95885	+	AL833535 NM_173521	-209224	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	182521	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	340288	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	340850	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chr14	24809501	24809647	reg1026090.p2	4.637	+	AF156884 AY453693 AY494982 AY494983 CU692020 TSC_hg19_v1_chr14_-_24809197 BC062584 AK296309 BC041668 AK296140 AK075275 NM_006871	-435	-	BX248285 BC027943 AK122714 AK126468 NM_001198568 NM_001198592 NM_139247 TSC_hg19_v1_chr14_-_24804278	-5309	-	NM_181657	-27262	+	AK310445 EU887632 EU887633 EU887634 NM_001136022 NM_001198967	26570	+	NM_001198965 NM_004554 BC037735 AK293185 TSC_hg19_v1_chr14_+_24837389 AK311078 AK311425 L41066 BC053855 AB527875 EU446638 EU887641 EU887642 EU887643	27811	+	AK302271 NM_001198966 AK310433 EU887644 EU887645 EU887646 EU887647 EU887648 EU887649 AK300450	28801	+	AF156884|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY453693|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494982|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494983|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC062584|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296309|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC041668|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296140|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK075275|RIPK3|11035|receptor-interacting serine-threonine kinase 3##NM_006871|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BX248285|ADCY4|196883|adenylate cyclase 4##BC027943|ADCY4|196883|adenylate cyclase 4##AK122714|ADCY4|196883|adenylate cyclase 4##AK126468|ADCY4|196883|adenylate cyclase 4##NM_001198568|ADCY4|196883|adenylate cyclase 4##NM_001198592|ADCY4|196883|adenylate cyclase 4##NM_139247|ADCY4|196883|adenylate cyclase 4##NM_181657|LTB4R|1241|leukotriene B4 receptor##AK310445|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887632|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887633|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887634|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001136022|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198967|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198965|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_004554|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##BC037735|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK293185|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK311078|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK311425|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##L41066|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##BC053855|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU446638|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887641|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887642|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887643|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK302271|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198966|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK310433|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887644|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887645|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887646|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887647|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887648|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887649|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##AK300450|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4	0.0	
chr15	45076708	45076888	reg1008243.p1	4.637	+	NM_080745 NM_182985	-48239	+	BC031266 TSC_hg19_v1_chr15_+_45021331	-55467	+	AK311550 TSC_hg19_v1_chr15_+_45021275 DQ232883	-55545	+	BC029537 NM_152448 DQ890983 DQ894158	172110	+	NM_003104 TSC_hg19_v1_chr15_+_45315395 AK312444 U07361 L29008 BC021085 AK295656 AK296574 AK309672 BC025295 AB529056 DQ892769 DQ896016	238592	+	TSC_hg19_v1_chr15_-_45406336 AF230496	329533	-	NM_080745|TRIM69|140691|tripartite motif containing 69##NM_182985|TRIM69|140691|tripartite motif containing 69##BC031266|TRIM69|140691|tripartite motif containing 69##DQ232883|TRIM69|140691|tripartite motif containing 69##BC029537|C15orf43|145645|chromosome 15 open reading frame 43##NM_152448|C15orf43|145645|chromosome 15 open reading frame 43##DQ890983|C15orf43|145645|chromosome 15 open reading frame 43##DQ894158|C15orf43|145645|chromosome 15 open reading frame 43##NM_003104|SORD|6652|sorbitol dehydrogenase##AK312444|SORD|6652|sorbitol dehydrogenase##U07361|SORD|6652|sorbitol dehydrogenase##L29008|SORD|6652|sorbitol dehydrogenase##BC021085|SORD|6652|sorbitol dehydrogenase##AK296574|SORD|6652|sorbitol dehydrogenase##AK309672|SORD|6652|sorbitol dehydrogenase##BC025295|SORD|6652|sorbitol dehydrogenase##DQ892769|SORD|6652|sorbitol dehydrogenase##DQ896016|SORD|6652|sorbitol dehydrogenase##AF230496|DUOX2|50506|dual oxidase 2	0.039292	
chr2	176116321	176116435	reg1035751.p1	4.637	+	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	-70074	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	-83483	-	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	-246365	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	750597	-	NM_001080458	832311	-	TSC_hg19_v1_chr2_+_176957451 NM_000523 AB463753	841166	+	CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715##NM_001080458|EVX2|344191|even-skipped homeobox 2##NM_000523|HOXD13|3239|homeobox D13	0.987427	CTCF.p2:-11:0.987
chr6	22373319	22373415	reg1026034.p2	4.637	+	X54394 X54393 GQ305133 M58594 NM_001163558	-70320	-	BC015850 NM_000948	-75638	-	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	-706708	+	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	196358	+	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	1753063	+	AF181722 NM_181337	1983763	+	X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1##AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1	0.0	
chr8	115858973	115859084	reg1028463.p1	4.637	+	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	-1409899	-	AB114605 NM_198124	-1469647	-	BC028739 AK313469 AF167082 NM_014379 AK297393	-4872062	-	TSC_hg19_v1_chr8_-_116680208 AK304046	821192	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	822137	-	TSC_hg19_v1_chr8_-_116681365 AF183810	822307	-	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I	0.185438	
chr14	97405373	97405497	reg1032516.p2	4.636	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-141720	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-436651	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-436689	+	AK098639 NM_182560	1772514	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	2332182	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	2332455	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.0	
chr20	22293510	22293631	reg1030991.p1	4.636	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	-607037	+	TSC_hg19_v1_chr20_+_21686296 NM_006192	-607276	+	NM_002509	-798907	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	271346	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	271505	-	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	272532	-	BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1##NM_006192|PAX1|5075|paired box 1##NM_002509|NKX2-2|4821|NK2 homeobox 2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2	0.533187	CTCF.p2:16:0.533
chr2	136358595	136358726	reg1031697.p2	4.636	+	TSC_hg19_v1_chr2_+_136289050 BC001217 D21852 BC041093 NM_015361	-69600	+	AK095362 BC089429 NM_032143	-69874	-	NM_001172435 NM_012233 TSC_hg19_v1_chr2_+_135809861 AK022494 BC146809 BC071602 D31886 AB385272 AB449877 BC030992	-548744	+	TSC_hg19_v1_chr2_+_136499328 NM_014607 AK311058	140577	+	TSC_hg19_v1_chr2_+_136499437 BC035594 EF199840 BX647662 AK304096 D87684 BC020806	140737	+	TSC_hg19_v1_chr2_+_136499492 AK292829 AB527369 AM392761 AM393478 CU690126 DQ891123 DQ894302	140833	+	BC001217|R3HDM1|23518|R3H domain containing 1##D21852|R3HDM1|23518|R3H domain containing 1##BC041093|R3HDM1|23518|R3H domain containing 1##NM_015361|R3HDM1|23518|R3H domain containing 1##AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##NM_001172435|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##NM_012233|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AK022494|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC146809|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC071602|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##D31886|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AB449877|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC030992|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##NM_014607|UBXN4|23190|UBX domain protein 4##AK311058|UBXN4|23190|UBX domain protein 4##BC035594|UBXN4|23190|UBX domain protein 4##EF199840|UBXN4|23190|UBX domain protein 4##BX647662|UBXN4|23190|UBX domain protein 4##AK304096|UBXN4|23190|UBX domain protein 4##D87684|UBXN4|23190|UBX domain protein 4##BC020806|UBXN4|23190|UBX domain protein 4##AK292829|UBXN4|23190|UBX domain protein 4##AM392761|UBXN4|23190|UBX domain protein 4##AM393478|UBXN4|23190|UBX domain protein 4##DQ891123|UBXN4|23190|UBX domain protein 4##DQ894302|UBXN4|23190|UBX domain protein 4	0.989525	CTCF.p2:19:0.990
chr2	242027625	242027709	reg1022371.p2	4.636	+	NM_001080437	-89413	+	AK056601 NM_001085437	-192095	-	BC125154 BC125155 AK026324 NM_024861 AK096434	-196248	-	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	14059	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	61204	-	AK308015 BC051689 TSC_hg19_v1_chr2_+_242089094	61391	+	NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54##BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase##AK308015|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC051689|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7	0.0	
chr2	99087513	99087693	reg1032289.p1	4.636	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-26245	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-124698	+	DQ426863 NM_001079878 NM_001298 DQ067460	-124970	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	137339	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	137447	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	137467	+	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)	0.0	
chr4	34722312	34722452	reg1034408.p1	4.636	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-3999923	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-4000188	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-4000383	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	1523655	-	AK131492 NM_001136536 AK304357 AK316523	1560864	+	BC157885 NM_001170700	1563261	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.998836	CTCF.p2:7:0.999
chr6	6393040	6393219	reg1028967.p2	4.636	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-72219	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-72244	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-385432	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	195821	+	BC039678 TSC_hg19_v1_chr6_+_6725205	332032	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	714697	+	NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1	0.0	
chr8	66894370	66894551	reg1029945.p1	4.636	+	TSC_hg19_v1_chr8_-_66754300 AK292680	-140168	-	NM_001242318	-140492	-	HQ258418 AK290801 BC058025 BC126360 NM_002603 U67932	-193209	-	NM_033105 BC016742 AF368276 AL133660	39359	+	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	144880	+	BC002599 BC011031 AK075431 NM_000756	196307	-	AK292680|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##HQ258418|PDE7A|5150|phosphodiesterase 7A##AK290801|PDE7A|5150|phosphodiesterase 7A##BC058025|PDE7A|5150|phosphodiesterase 7A##BC126360|PDE7A|5150|phosphodiesterase 7A##NM_002603|PDE7A|5150|phosphodiesterase 7A##U67932|PDE7A|5150|phosphodiesterase 7A##NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone	0.0	
chr2	143635102	143635259	reg1033385.p1	4.635	+	AF176832 NM_018557	-745911	-	TSC_hg19_v1_chr2_-_142888540 AK054663	-746624	-	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-4097374	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	26	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	60	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	251750	+	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15	0.0	
chr3	165613829	165613950	reg1034443.p1	4.635	+	NM_000055 TSC_hg19_v1_chr3_-_165555283	-58622	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	-58696	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	-699384	-	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	1484188	-	AK226025 AB006423 NM_006217 AK293391	1577931	-	BC035512 NM_178824	1757399	-	NM_000055|BCHE|590|butyrylcholinesterase##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing##AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##BC035512|WDR49|151790|WD repeat domain 49##NM_178824|WDR49|151790|WD repeat domain 49	0.88483	CTCF.p2:0:0.885
chr3	189058607	189058740	reg1031069.p1	4.635	+	AK125682 NM_198485 BC101550 BC101552	-168862	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-393703	+	NM_001167671 BC130584 BC144076	-1115439	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	290586	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	448845	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	780022	-	AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1	0.984893	CTCF.p2:-33:0.985
chr3	47891648	47891721	reg1031195.p2	4.635	+	TSC_hg19_v1_chr3_+_47866475 AK002076	-25196	+	AK096791 TSC_hg19_v1_chr3_+_47844627 BC020126 BC038417 BC015029 AB020697 BC063510	-47028	+	BC047335 NM_014966 NM_138615 TSC_hg19_v1_chr3_+_47844624 BC028405 AK291266	-47173	+	TSC_hg19_v1_chr3_-_47934000 AK054696	42346	-	TSC_hg19_v1_chr3_-_47957477 BX649077	65859	-	TSC_hg19_v1_chr3_-_48040260 CU679053 EU831606 EU831693	148620	-	AK002076|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC047335|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##NM_014966|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##NM_138615|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC028405|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK291266|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK054696|MAP4|4134|microtubule-associated protein 4##EU831606|MAP4|4134|microtubule-associated protein 4##EU831693|MAP4|4134|microtubule-associated protein 4	0.012544	
chr6	123714619	123714749	reg1031779.p2	4.635	+	BC101377 BC101376 NM_001010852	-397104	+	TSC_hg19_v1_chr6_+_123317379 AK295158	-397301	+	TSC_hg19_v1_chr6_+_123110402 AK000184 BC018999 BC066591 AK301365 DQ892207 DQ895402 CU676352	-604267	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	243405	-	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	410520	+	AK093417 AX748113 BC026087 NM_152553	1589827	+	BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##AK295158|CLVS2|134829|clavesin 2##AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217	0.94379	CTCF.p2:-14:0.944
chrX	35744452	35744551	reg1031356.p1	4.635	+	BC035026 NM_152631 AK093101 AX747923 CU690032	-783572	+	TSC_hg19_v1_chrX_-_34675406 BC039242 NM_031442	-1069093	-	BC026171 AK292354 NM_203408	-1594065	-	NM_001099921	71957	+	NM_152632 AK126295 BC027936 CU693328	193381	+	AK093920 AX748365 NM_173695	320551	+	BC035026|FAM47B|170062|family with sequence similarity 47, member B##NM_152631|FAM47B|170062|family with sequence similarity 47, member B##AK093101|FAM47B|170062|family with sequence similarity 47, member B##BC039242|TMEM47|83604|transmembrane protein 47##NM_031442|TMEM47|83604|transmembrane protein 47##BC026171|FAM47A|158724|family with sequence similarity 47, member A##AK292354|FAM47A|158724|family with sequence similarity 47, member A##NM_203408|FAM47A|158724|family with sequence similarity 47, member A##NM_001099921|MAGEB16|139604|melanoma antigen family B, 16##NM_152632|CXorf22|170063|chromosome X open reading frame 22##AK126295|CXorf22|170063|chromosome X open reading frame 22##BC027936|CXorf22|170063|chromosome X open reading frame 22##AK093920|CXorf59|286464|chromosome X open reading frame 59##NM_173695|CXorf59|286464|chromosome X open reading frame 59	0.266411	CTCF.p2:-3:0.266
chr2	12197730	12197856	reg1028592.p1	4.634	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-311018	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-387502	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-514950	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	659460	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	660123	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	660604	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.050602	
chr4	162485461	162485624	reg1031947.p1	4.634	+	AK294459 NM_014247	-2296545	+	AK058100 NM_152543	-2529210	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-2795257	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	599609	-	TSC_hg19_v1_chr4_-_164088002 AK097352	1602450	-	TSC_hg19_v1_chr4_-_164088043 AK308601	1602495	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.685551	CTCF.p2:29:0.686
chr7	116870959	116871116	reg1030008.p2	4.634	+	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	-210672	+	TSC_hg19_v1_chr7_+_116660271 AK093212	-210770	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	-277464	+	BC078170 AK056742 NM_003391 X07876	92298	-	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	196508	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	249001	+	AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##AK093212|ST7|7982|suppression of tumorigenicity 7##AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	0.0	
chr8	101507401	101507581	reg1022928.p3	4.634	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-185206	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-185310	-	AB271913 AB271914 AB029316 NM_015435	-192020	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	64449	-	AK093906 AX748361 NM_152628	154401	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	226315	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr12	131962127	131962286	reg1029226.p1	4.633	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-523753	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-605495	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-605581	+	TSC_hg19_v1_chr12_+_132195623 BC142980	233407	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	233450	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	350760	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.0	
chr1	50799370	50799454	reg1022055.p2	4.633	+	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-223874	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-224728	+	TSC_hg19_v1_chr1_+_50574591 NM_001144774 NM_021952	-224821	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	89699	-	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	626165	-	TSC_hg19_v1_chr1_-_51425740 BC067100	626344	-	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_032110|DMRTA2|63950|DMRT-like family A2##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.99914	CTCF.p2:4:0.999
chr19	28565842	28566022	reg1030793.p2	4.633	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-281004	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-281099	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-281544	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	1138128	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	1138189	-	NM_001146339	1451558	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.0	
chr5	176944035	176944138	reg1030137.p1	4.633	+	TSC_hg19_v1_chr5_-_176943963 BC015476 NM_016222	-122	-	TSC_hg19_v1_chr5_-_176943961 AK027768 AK091774 AK315491	-126	-	AK001255 AK092585 AK222598 AX747613 TSC_hg19_v1_chr5_-_176943952	-135	-	AB067518 TSC_hg19_v1_chr5_-_176981559 NM_001190946	37462	-	TSC_hg19_v1_chr5_+_177019199 AK313292 BC001123 NM_017510 AF441399 AK298435	75148	+	TSC_hg19_v1_chr5_+_177027143 BC007317 NM_007255 BC072403 AY358578 BC062983 AB028600 AK023506 AF142675 DQ893010 DQ896256 AB527637 AJ005382	83068	+	BC015476|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##NM_016222|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK027768|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK091774|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK315491|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK001255|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK092585|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AK222598|DDX41|51428|DEAD (Asp-Glu-Ala-Asp) box polypeptide 41##AB067518|FAM193B|54540|family with sequence similarity 193, member B##NM_001190946|FAM193B|54540|family with sequence similarity 193, member B##AK313292|TMED9|54732|transmembrane emp24 protein transport domain containing 9##BC001123|TMED9|54732|transmembrane emp24 protein transport domain containing 9##NM_017510|TMED9|54732|transmembrane emp24 protein transport domain containing 9##AF441399|TMED9|54732|transmembrane emp24 protein transport domain containing 9##AK298435|TMED9|54732|transmembrane emp24 protein transport domain containing 9##BC007317|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##NM_007255|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC072403|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AY358578|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC062983|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AB028600|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AK023506|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF142675|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ893010|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ896256|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AJ005382|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)	0.0	
chr6	54486254	54486340	reg1025376.p1	4.633	+	BC070278 NM_014464 AK312918 BC056235 AB022277 AF195116 AF195117 CU687080 CU691132 EU832329 EU832414	-313022	+	NM_138569 BX647567 AK055530	-602547	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	-826366	+	AK055204 NM_001010872 BC101628 BC112275	225291	+	NM_001526 AK314279	552797	+	AY358198 NM_207410	705969	+	BC070278|TINAG|27283|tubulointerstitial nephritis antigen##NM_014464|TINAG|27283|tubulointerstitial nephritis antigen##AK312918|TINAG|27283|tubulointerstitial nephritis antigen##BC056235|TINAG|27283|tubulointerstitial nephritis antigen##AB022277|TINAG|27283|tubulointerstitial nephritis antigen##AF195116|TINAG|27283|tubulointerstitial nephritis antigen##AF195117|TINAG|27283|tubulointerstitial nephritis antigen##EU832329|TINAG|27283|tubulointerstitial nephritis antigen##EU832414|TINAG|27283|tubulointerstitial nephritis antigen##NM_138569|MLIP|90523|muscular LMNA-interacting protein##BX647567|MLIP|90523|muscular LMNA-interacting protein##AK055530|MLIP|90523|muscular LMNA-interacting protein##AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1##AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B##NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2##AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2##AY358198|GFRAL|389400|GDNF family receptor alpha like##NM_207410|GFRAL|389400|GDNF family receptor alpha like	0.548287	CTCF.p2:-19:0.548
chr14	31553689	31553769	reg1027370.p1	4.632	+	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	-58159	-	NM_001128126 NM_007077	-59047	+	TSC_hg19_v1_chr14_+_31343764 NM_001135058 NM_004086 AY358900 AF006740 AK292724 BC000640 BC007230 BC018827	-210011	+	TSC_hg19_v1_chr14_-_31676690 NM_015382	122956	-	TSC_hg19_v1_chr14_-_31676920 BC016947	123206	-	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	336032	-	BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3##NM_001128126|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##NM_007077|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##NM_001135058|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_004086|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AY358900|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AF006740|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AK292724|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC000640|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC007230|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC018827|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_015382|HECTD1|25831|HECT domain containing 1##BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A	0.326338	CTCF.p2:40:0.316
chr14	69130327	69130460	reg1025066.p1	4.632	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-843873	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-847094	-	AK315462 NM_152443	-961791	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	129327	-	NM_001244698 NM_004926	130237	-	NM_001244701 AB528867	132591	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr19	58919613	58919794	reg1029613.p1	4.632	+	NM_001195135	-12247	+	TSC_hg19_v1_chr19_+_58898635 AK223106 AK311938 D28455 NM_001009 BC015405 BC018828 BC018151 BC035830 U14970	-21051	+	TSC_hg19_v1_chr19_-_58892398 BC029960 NM_001129730 NM_138466	-27287	-	TSC_hg19_v1_chr19_+_58920045 AK290068 BC033149 NM_173548	344	+	BC017651 TSC_hg19_v1_chr19_+_58920143 AK298929	427	+	AK057460 NM_003433	31885	-	NM_001195135|LOC646862|646862|uncharacterized LOC646862##AK223106|RPS5|6193|ribosomal protein S5##AK311938|RPS5|6193|ribosomal protein S5##D28455|RPS5|6193|ribosomal protein S5##NM_001009|RPS5|6193|ribosomal protein S5##BC015405|RPS5|6193|ribosomal protein S5##BC018828|RPS5|6193|ribosomal protein S5##BC018151|RPS5|6193|ribosomal protein S5##BC035830|RPS5|6193|ribosomal protein S5##U14970|RPS5|6193|ribosomal protein S5##BC029960|ZNF837|116412|zinc finger protein 837##NM_001129730|ZNF837|116412|zinc finger protein 837##NM_138466|ZNF837|116412|zinc finger protein 837##AK290068|ZNF584|201514|zinc finger protein 584##BC033149|ZNF584|201514|zinc finger protein 584##NM_173548|ZNF584|201514|zinc finger protein 584##BC017651|ZNF584|201514|zinc finger protein 584##AK298929|ZNF584|201514|zinc finger protein 584##AK057460|ZNF132|7691|zinc finger protein 132##NM_003433|ZNF132|7691|zinc finger protein 132	0.0	
chr2	106360791	106360906	reg1027599.p2	4.632	+	NM_201557	-305619	-	TSC_hg19_v1_chr2_-_106015453 BC093049 CR936799 BC036085 BC021049 AK313841 L42176 NM_001039492 BC012742 BC014397 DQ266432 NM_001450 NM_201555	-345297	-	TSC_hg19_v1_chr2_+_105954010 AK127661 BC001310 NM_024093 DQ891212 DQ894395	-406824	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	695	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	72127	+	NM_001004720 BC000103	107413	+	NM_201557|FHL2|2274|four and a half LIM domains 2##BC093049|FHL2|2274|four and a half LIM domains 2##CR936799|FHL2|2274|four and a half LIM domains 2##BC036085|FHL2|2274|four and a half LIM domains 2##AK313841|FHL2|2274|four and a half LIM domains 2##L42176|FHL2|2274|four and a half LIM domains 2##NM_001039492|FHL2|2274|four and a half LIM domains 2##BC012742|FHL2|2274|four and a half LIM domains 2##BC014397|FHL2|2274|four and a half LIM domains 2##DQ266432|FHL2|2274|four and a half LIM domains 2##NM_001450|FHL2|2274|four and a half LIM domains 2##NM_201555|FHL2|2274|four and a half LIM domains 2##AK127661|C2orf49|79074|chromosome 2 open reading frame 49##BC001310|C2orf49|79074|chromosome 2 open reading frame 49##NM_024093|C2orf49|79074|chromosome 2 open reading frame 49##DQ891212|C2orf49|79074|chromosome 2 open reading frame 49##DQ894395|C2orf49|79074|chromosome 2 open reading frame 49##NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2	0.0	
chr2	232057255	232057375	reg1027855.p1	4.632	+	AK313741 BC063123 NM_000867	-67526	-	TSC_hg19_v1_chr2_+_231921625 BC020223 BC007535 BC073833 BC039845 BC047897 D44466 AB590660	-135635	+	BC014013 TSC_hg19_v1_chr2_+_231921608 BC005036 BC032445 BC112344 BC114434 AK312528 BC001053 AK307513	-135699	+	TSC_hg19_v1_chr2_+_232063340 NM_025139 BX537956 AK309395	6040	+	AY219922 TSC_hg19_v1_chr2_+_232063378	6063	+	TSC_hg19_v1_chr2_+_232063410 AY929062	6079	+	AK313741|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B##BC063123|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B##NM_000867|HTR2B|3357|5-hydroxytryptamine (serotonin) receptor 2B##BC020223|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC007535|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC073833|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC039845|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC047897|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##D44466|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC014013|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC032445|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC112344|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC114434|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK312528|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC001053|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307513|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_025139|ARMC9|80210|armadillo repeat containing 9##BX537956|ARMC9|80210|armadillo repeat containing 9##AK309395|ARMC9|80210|armadillo repeat containing 9##AY219922|ARMC9|80210|armadillo repeat containing 9##AY929062|ARMC9|80210|armadillo repeat containing 9	0.060098	
chr3	167600102	167600205	reg1013434.p2	4.632	+	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-146664	+	BC002506 NM_007217 AF022385 NM_145860 TSC_hg19_v1_chr3_-_167452681 BC016353 NM_145859 AK291130	-147502	-	TSC_hg19_v1_chr3_-_167371732 AK097556	-228430	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	212962	-	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	213278	-	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	1263926	-	NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC002506|PDCD10|11235|programmed cell death 10##NM_007217|PDCD10|11235|programmed cell death 10##AF022385|PDCD10|11235|programmed cell death 10##NM_145860|PDCD10|11235|programmed cell death 10##BC016353|PDCD10|11235|programmed cell death 10##NM_145859|PDCD10|11235|programmed cell death 10##AK291130|PDCD10|11235|programmed cell death 10##AK097556|WDR49|151790|WD repeat domain 49##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus	0.968849	
chr6	26446200	26446360	reg1027089.p1	4.632	+	NM_001242803 NM_006994 NM_197974 AK291722 AK301553 AB209581 BC015815 AK223279 AK223301 U90548	-5541	+	AK291162 NM_001145008 NM_001145009 NM_007048 NM_194441 AK290193 AK295720 TSC_hg19_v1_chr6_+_26402502 BC118586 BC121800 AK299327 BC065567 U90552 AK298652 Y07827	-43758	+	NM_001197238 NM_001197239 NM_001197240 NM_006995 NM_181531 AK304744 AK289883 AK293526 AK298570 U90550 BC017497 NM_001197237 BC014021	-62888	+	NM_001197234 NM_007049 NM_078476 TSC_hg19_v1_chr6_+_26458182 AK297098 NM_001197233 BC016661 AB209777 U90543	11910	+	U39576 BC096312 BC096313 BC096314 BC096315 NM_001732	55191	+	TSC_hg19_v1_chr6_+_26538630 NM_006353 AK311841 BC001282	92350	+	NM_001242803|BTN3A3|10384|butyrophilin, subfamily 3, member A3##NM_006994|BTN3A3|10384|butyrophilin, subfamily 3, member A3##NM_197974|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK291722|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK301553|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AB209581|BTN3A3|10384|butyrophilin, subfamily 3, member A3##BC015815|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK223279|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK223301|BTN3A3|10384|butyrophilin, subfamily 3, member A3##U90548|BTN3A3|10384|butyrophilin, subfamily 3, member A3##AK291162|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_001145008|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_001145009|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_007048|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_194441|BTN3A1|11119|butyrophilin, subfamily 3, member A1##AK290193|BTN3A1|11119|butyrophilin, subfamily 3, member A1##AK295720|BTN3A1|11119|butyrophilin, subfamily 3, member A1##BC118586|BTN3A1|11119|butyrophilin, subfamily 3, member A1##BC121800|BTN3A1|11119|butyrophilin, subfamily 3, member A1##AK299327|BTN3A1|11119|butyrophilin, subfamily 3, member A1##BC065567|BTN3A1|11119|butyrophilin, subfamily 3, member A1##U90552|BTN3A1|11119|butyrophilin, subfamily 3, member A1##AK298652|BTN3A1|11119|butyrophilin, subfamily 3, member A1##Y07827|BTN3A1|11119|butyrophilin, subfamily 3, member A1##NM_001197238|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197239|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197240|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_006995|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_181531|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK304744|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK289883|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK293526|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK298570|BTN2A2|10385|butyrophilin, subfamily 2, member A2##U90550|BTN2A2|10385|butyrophilin, subfamily 2, member A2##BC017497|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197237|BTN2A2|10385|butyrophilin, subfamily 2, member A2##BC014021|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197234|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_007049|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_078476|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AK297098|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_001197233|BTN2A1|11120|butyrophilin, subfamily 2, member A1##BC016661|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AB209777|BTN2A1|11120|butyrophilin, subfamily 2, member A1##U90543|BTN2A1|11120|butyrophilin, subfamily 2, member A1##U39576|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096312|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096313|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096314|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096315|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001732|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_006353|HMGN4|10473|high mobility group nucleosomal binding domain 4##AK311841|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC001282|HMGN4|10473|high mobility group nucleosomal binding domain 4	0.0	
chr7	43494779	43494905	reg1023850.p2	4.632	+	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	-342616	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-522873	+	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	-523041	-	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	127852	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	274252	-	TSC_hg19_v1_chr7_+_43798278 NM_000712 NM_001253823 BC005902 BC008456	303425	+	AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44##NM_000712|BLVRA|644|biliverdin reductase A##NM_001253823|BLVRA|644|biliverdin reductase A##BC005902|BLVRA|644|biliverdin reductase A##BC008456|BLVRA|644|biliverdin reductase A	0.097278	
chr9	79073920	79074015	reg1029357.p2	4.632	+	AY196293 NM_001097634	-17386	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	-64576	-	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	-568332	+	NM_001097633 NM_001490 TSC_hg19_v1_chr9_+_79074142 AY196294 AY196295 AL832647	149	+	AY196296 NM_001097635	19289	+	AY196297 NM_001097636	41581	+	AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_001097633|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001490|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196294|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196295|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AL832647|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196297|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097636|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.0	
chr1	22699400	22699473	reg1022109.p1	4.631	+	AY009398 BT020125 AB590593 AB061675 AY358947 AF316543 NM_030761 BC057781	-229925	-	TSC_hg19_v1_chr1_+_22379812 AL121737	-319631	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	-320266	+	AK091019 AK095273 AX746732 NM_001083621 NM_014870 TSC_hg19_v1_chr1_+_22778343	78908	+	TSC_hg19_v1_chr1_+_22778350 AB007947 BC114607	78990	+	TSC_hg19_v1_chr1_+_22889990 BC072417 NM_001006943 NM_020526 BC038796 AB527136	190620	+	AY009398|WNT4|54361|wingless-type MMTV integration site family, member 4##BT020125|WNT4|54361|wingless-type MMTV integration site family, member 4##AB061675|WNT4|54361|wingless-type MMTV integration site family, member 4##AY358947|WNT4|54361|wingless-type MMTV integration site family, member 4##AF316543|WNT4|54361|wingless-type MMTV integration site family, member 4##NM_030761|WNT4|54361|wingless-type MMTV integration site family, member 4##BC057781|WNT4|54361|wingless-type MMTV integration site family, member 4##AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40##AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40##AB007947|ZBTB40|9923|zinc finger and BTB domain containing 40##BC114607|ZBTB40|9923|zinc finger and BTB domain containing 40##BC072417|EPHA8|2046|EPH receptor A8##NM_001006943|EPHA8|2046|EPH receptor A8##NM_020526|EPHA8|2046|EPH receptor A8##BC038796|EPHA8|2046|EPH receptor A8	0.0	
chr12	64981344	64981444	reg1032365.p2	4.631	+	NM_013254 TSC_hg19_v1_chr12_+_64845917 AK291039 BC034950 AF191838	-135501	+	BC020569 Y16414 TSC_hg19_v1_chr12_+_64803772 AF039022	-177616	+	TSC_hg19_v1_chr12_+_64798240 NM_007235 AK308108 AK292884	-183148	+	TSC_hg19_v1_chr12_+_65004274 AY217662 AY217663 BC100949 BC100950 BC100951 BC100952 NM_178169	22867	+	CU680338 Z12173 TSC_hg19_v1_chr12_-_65153140	171703	-	TSC_hg19_v1_chr12_-_65153163 AK308454 AK291771	171765	-	NM_013254|TBK1|29110|TANK-binding kinase 1##AK291039|TBK1|29110|TANK-binding kinase 1##BC034950|TBK1|29110|TANK-binding kinase 1##AF191838|TBK1|29110|TANK-binding kinase 1##BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##NM_007235|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK308108|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK292884|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AY217662|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##AY217663|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100949|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100950|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100951|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100952|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##NM_178169|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##Z12173|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK308454|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK291771|GNS|2799|glucosamine (N-acetyl)-6-sulfatase	0.031463	
chr1	28363100	28363206	reg1031633.p2	4.631	+	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-76635	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-101592	+	TSC_hg19_v1_chr1_-_28241258 BC021257 NM_002946	-121889	-	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	51971	-	NM_000952 NM_001164723	140301	-	S52624 AK292053 NM_001164721 NM_001164722	157259	-	AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC021257|RPA2|6118|replication protein A2, 32kDa##NM_002946|RPA2|6118|replication protein A2, 32kDa##BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor	0.33993	CTCF.p2:-15:0.340
chr19	58144281	58144430	reg1024726.p1	4.631	+	BC112294 BC113410 NM_003435	-18528	+	TSC_hg19_v1_chr19_+_58125633 U09412 BC021280	-18716	+	TSC_hg19_v1_chr19_+_58125609 AK291763 BC053511 BC042636 BC011646	-18735	+	TSC_hg19_v1_chr19_+_58144535 NM_006385 NM_198855 AK294869 BC018138 AK296942 AK297047 AK304666 BC110856 BC034351 AK026941	210	+	U38904 TSC_hg19_v1_chr19_+_58152388	8004	+	AK092424 AX747538 NM_152677	35947	+	BC112294|ZNF134|7693|zinc finger protein 134##BC113410|ZNF134|7693|zinc finger protein 134##NM_003435|ZNF134|7693|zinc finger protein 134##U09412|ZNF134|7693|zinc finger protein 134##BC021280|ZNF134|7693|zinc finger protein 134##AK291763|ZNF134|7693|zinc finger protein 134##BC042636|ZNF134|7693|zinc finger protein 134##BC011646|ZNF134|7693|zinc finger protein 134##NM_006385|ZNF211|10520|zinc finger protein 211##NM_198855|ZNF211|10520|zinc finger protein 211##AK294869|ZNF211|10520|zinc finger protein 211##BC018138|ZNF211|10520|zinc finger protein 211##AK296942|ZNF211|10520|zinc finger protein 211##AK297047|ZNF211|10520|zinc finger protein 211##AK304666|ZNF211|10520|zinc finger protein 211##BC110856|ZNF211|10520|zinc finger protein 211##BC034351|ZNF211|10520|zinc finger protein 211##AK026941|ZNF211|10520|zinc finger protein 211##U38904|ZNF211|10520|zinc finger protein 211##AK092424|ZSCAN4|201516|zinc finger and SCAN domain containing 4##NM_152677|ZSCAN4|201516|zinc finger and SCAN domain containing 4	0.0	
chr4	44496138	44496245	reg1030876.p2	4.631	+	AK123347 NM_198353	-45368	-	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	-45638	-	AB528853 NM_001080476	-1600910	+	AK096895 BC103995 BC103996 NM_182592	157466	-	TSC_hg19_v1_chr4_+_44680469 NM_021927 BX647242 BC036768 BC012338 AK225314 AK023282 AK308667	184269	+	TSC_hg19_v1_chr4_-_44728574 AK296051 AB209904 AK055639 AY173948 AK129655 AK308920 AF247786 NM_138335	232373	-	AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7##NM_021927|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BX647242|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC036768|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC012338|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK225314|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK023282|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK308667|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	0.383251	CTCF.p2:-17:0.383
chr6	157276	157406	reg1028622.p1	4.631	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	134744	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	135156	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	234423	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.980068	CTCF.p2:5:0.980
chr10	73597017	73597131	reg1027765.p1	4.630	+	AY563161 AY563162 NM_001171935 NM_001171936	-25435	+	AY563165 AY563166 NM_001171933 NM_001171934	-41547	+	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	-63768	-	TSC_hg19_v1_chr10_-_73611004 BT006849 CR456746 CU678650 DQ893009 DQ896255 M60255 M60257 M60258 AB527305 BC001503 J03015 M32221 D00422 M81355 AB209776 BC004275 BC007612	13907	-	AK223290 AK293672 AK307721 TSC_hg19_v1_chr10_-_73611007 AK129790 J03077 AK057878 BC091483	13943	-	AK299184 TSC_hg19_v1_chr10_-_73611043	13969	-	AY563161|CDH23|64072|cadherin-related 23##AY563162|CDH23|64072|cadherin-related 23##NM_001171935|CDH23|64072|cadherin-related 23##NM_001171936|CDH23|64072|cadherin-related 23##AY563165|CDH23|64072|cadherin-related 23##AY563166|CDH23|64072|cadherin-related 23##NM_001171933|CDH23|64072|cadherin-related 23##NM_001171934|CDH23|64072|cadherin-related 23##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54##BT006849|PSAP|5660|prosaposin##CR456746|PSAP|5660|prosaposin##DQ893009|PSAP|5660|prosaposin##DQ896255|PSAP|5660|prosaposin##M60255|PSAP|5660|prosaposin##M60257|PSAP|5660|prosaposin##M60258|PSAP|5660|prosaposin##BC001503|PSAP|5660|prosaposin##J03015|PSAP|5660|prosaposin##M32221|PSAP|5660|prosaposin##D00422|PSAP|5660|prosaposin##M81355|PSAP|5660|prosaposin##AB209776|PSAP|5660|prosaposin##BC004275|PSAP|5660|prosaposin##BC007612|PSAP|5660|prosaposin##AK223290|PSAP|5660|prosaposin##AK293672|PSAP|5660|prosaposin##AK307721|PSAP|5660|prosaposin##AK129790|PSAP|5660|prosaposin##J03077|PSAP|5660|prosaposin##AK057878|PSAP|5660|prosaposin##BC091483|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin	0.28899	CTCF.p2:3:0.289
chr11	58949998	58950103	reg1030277.p1	4.630	+	TSC_hg19_v1_chr11_+_58940008 AB023154 AB385405	-10021	+	TSC_hg19_v1_chr11_+_58939648 NM_015177	-10365	+	NM_022074 NM_198847 AK291453 BC071759 AK092061 AX747338	-37771	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	30357	-	BC140917 NM_001004729	181857	+	NM_001001954 BC136991	240386	-	AB023154|DTX4|23220|deltex homolog 4 (Drosophila)##NM_015177|DTX4|23220|deltex homolog 4 (Drosophila)##NM_022074|FAM111A|63901|family with sequence similarity 111, member A##NM_198847|FAM111A|63901|family with sequence similarity 111, member A##AK291453|FAM111A|63901|family with sequence similarity 111, member A##BC071759|FAM111A|63901|family with sequence similarity 111, member A##AK092061|FAM111A|63901|family with sequence similarity 111, member A##BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1##BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001001954|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC136991|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2	0.013255	
chr17	80498417	80498596	reg1027188.p2	4.630	+	TSC_hg19_v1_chr17_+_80477607 NM_004514	-20916	+	TSC_hg19_v1_chr17_+_80416616 BC016440 CU674220 CU677625	-81864	+	TSC_hg19_v1_chr17_+_80416583 AK297875 NM_001083608 NM_012336 NM_031968 BC000438 AK000929 AK303155 AK307351 AF128406	-81943	+	TSC_hg19_v1_chr17_-_80606321 AK297477 BC000974 AM182326 AB464355 BC007838 NM_019613	107777	-	TSC_hg19_v1_chr17_-_80656575 BC035814 U05227 AB209711 BC018039 NM_006822	158028	-	TSC_hg19_v1_chr17_+_80674622 NM_024619 AK293523 AK301958 AK315373 BC007611 AK022233 AL136631 AY360465 BC014408 AB385548 CU676977 CR533461	176100	+	NM_004514|FOXK2|3607|forkhead box K2##BC016440|NARF|26502|nuclear prelamin A recognition factor##AK297875|NARF|26502|nuclear prelamin A recognition factor##NM_001083608|NARF|26502|nuclear prelamin A recognition factor##NM_012336|NARF|26502|nuclear prelamin A recognition factor##NM_031968|NARF|26502|nuclear prelamin A recognition factor##BC000438|NARF|26502|nuclear prelamin A recognition factor##AK000929|NARF|26502|nuclear prelamin A recognition factor##AK303155|NARF|26502|nuclear prelamin A recognition factor##AF128406|NARF|26502|nuclear prelamin A recognition factor##AK297477|WDR45L|56270|WDR45-like##BC000974|WDR45L|56270|WDR45-like##AM182326|WDR45L|56270|WDR45-like##BC007838|WDR45L|56270|WDR45-like##NM_019613|WDR45L|56270|WDR45-like##BC035814|RAB40B|10966|RAB40B, member RAS oncogene family##U05227|RAB40B|10966|RAB40B, member RAS oncogene family##AB209711|RAB40B|10966|RAB40B, member RAS oncogene family##BC018039|RAB40B|10966|RAB40B, member RAS oncogene family##NM_006822|RAB40B|10966|RAB40B, member RAS oncogene family##NM_024619|FN3KRP|79672|fructosamine 3 kinase related protein##AK293523|FN3KRP|79672|fructosamine 3 kinase related protein##AK301958|FN3KRP|79672|fructosamine 3 kinase related protein##AK315373|FN3KRP|79672|fructosamine 3 kinase related protein##BC007611|FN3KRP|79672|fructosamine 3 kinase related protein##AK022233|FN3KRP|79672|fructosamine 3 kinase related protein##AL136631|FN3KRP|79672|fructosamine 3 kinase related protein##AY360465|FN3KRP|79672|fructosamine 3 kinase related protein##BC014408|FN3KRP|79672|fructosamine 3 kinase related protein##CR533461|FN3KRP|79672|fructosamine 3 kinase related protein	0.03239	
chr18	24127792	24127960	reg1030472.p2	4.630	+	TSC_hg19_v1_chr18_+_23806444 NM_005640 AB234096	-321459	+	BC042820 NM_001025096 NM_001025097 NM_144662 BC025393 BC028371 BC028686 BC025389 BC047355 BC021713	-414028	+	AB527567 EU832762 GQ129305 AB300354 AB300355 AB300356 AB300357 AF230662 AF244972 AF257500 AF343880 BC096221 BC096222 BC096223 BC096224 CR542088 CR542103 X79201 TSC_hg19_v1_chr18_-_23670574 AK304305 AK316302 AK316338 AK299082 AK307923 AK289510 NM_001007559 NM_005637 AK301504	-457296	-	NM_001142730 TSC_hg19_v1_chr18_-_24128518	634	-	AK289870 BC063652 TSC_hg19_v1_chr18_-_24129261 NM_001136205	1365	-	AF542549 NM_198991	92431	-	NM_005640|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##AB234096|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##EU832762|SS18|6760|synovial sarcoma translocation, chromosome 18##GQ129305|SS18|6760|synovial sarcoma translocation, chromosome 18##AF244972|SS18|6760|synovial sarcoma translocation, chromosome 18##AF343880|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096221|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096222|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096223|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096224|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542088|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542103|SS18|6760|synovial sarcoma translocation, chromosome 18##X79201|SS18|6760|synovial sarcoma translocation, chromosome 18##AK304305|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316302|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316338|SS18|6760|synovial sarcoma translocation, chromosome 18##AK299082|SS18|6760|synovial sarcoma translocation, chromosome 18##AK307923|SS18|6760|synovial sarcoma translocation, chromosome 18##AK289510|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001007559|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_005637|SS18|6760|synovial sarcoma translocation, chromosome 18##AK301504|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1##AK289870|KCTD1|284252|potassium channel tetramerisation domain containing 1##BC063652|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001136205|KCTD1|284252|potassium channel tetramerisation domain containing 1##AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1	0.0	
chr19	5805959	5806074	reg1028625.p1	4.630	+	TSC_hg19_v1_chr19_-_5791224 BC004549 AK315691 AK297037 NM_001161619 NM_020175	-14786	-	TSC_hg19_v1_chr19_-_5791185 BC009973	-14831	-	TSC_hg19_v1_chr19_-_5791173 AL365411 CU678764 EU832641 EU832718 AK023958 AK225840	-14973	-	AL161995 NM_004558	17801	+	TSC_hg19_v1_chr19_-_5838802 AF131211 AK098073 AK313130	32759	-	U27333 U27335 U27337 BC061700 BC040472 NM_000150 NM_001040701 TSC_hg19_v1_chr19_-_5839765	33718	-	BC004549|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK315691|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK297037|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##NM_001161619|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##NM_020175|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##BC009973|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AL365411|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##EU832641|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##EU832718|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK023958|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AK225840|DUS3L|56931|dihydrouridine synthase 3-like (S. cerevisiae)##AL161995|NRTN|4902|neurturin##NM_004558|NRTN|4902|neurturin##AF131211|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##AK098073|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##AK313130|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##U27333|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##U27335|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##U27337|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##BC061700|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##NM_000150|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)##NM_001040701|FUT6|2528|fucosyltransferase 6 (alpha (1,3) fucosyltransferase)	0.980242	CTCF.p2:18:0.980
chr20	2627663	2627751	reg1021352.p2	4.630	+	AF417580 NM_080751 AB463320	-110449	+	AK096911 NM_024325	-137930	-	BC002897 TSC_hg19_v1_chr20_-_2489551	-138144	-	BC104791 BC104793 NM_006392 TSC_hg19_v1_chr20_+_2633277 AK292721 BX647439 BC035369	5544	+	AL050094 TSC_hg19_v1_chr20_-_2641583	13829	-	TSC_hg19_v1_chr20_-_2644844 BC019037 CU674954 DQ892561 DQ895776 DQ895816 EU831924 EU832019 AK001905 BC001960 NM_006899 NM_174855 NM_174856 AK309488 AK315641 AK300485	17127	-	AF417580|TMC2|117532|transmembrane channel-like 2##NM_080751|TMC2|117532|transmembrane channel-like 2##AK096911|ZNF343|79175|zinc finger protein 343##NM_024325|ZNF343|79175|zinc finger protein 343##BC002897|ZNF343|79175|zinc finger protein 343##BC104791|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##BC104793|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##NM_006392|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##AK292721|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##BX647439|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##BC035369|NOP56|10528|NOP56 ribonucleoprotein homolog (yeast)##AL050094|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##BC019037|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ892561|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ895776|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##DQ895816|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##EU831924|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##EU832019|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK001905|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##BC001960|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_006899|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_174855|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##NM_174856|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK309488|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK315641|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta##AK300485|IDH3B|3420|isocitrate dehydrogenase 3 (NAD+) beta	0.998889	CTCF.p2:3:0.999
chr22	26763699	26763877	reg1030512.p1	4.630	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	-198125	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	-198291	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	-198351	+	TSC_hg19_v1_chr22_+_26825246 NM_020437 BC036753 AK315112	61536	+	AK097886 BC035614 AK054717 AL365512 NM_152841	111675	-	TSC_hg19_v1_chr22_-_26879750 AK057648 AK290211	115954	-	CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4##BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4##AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4##AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4##NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4##AK057648|HPS4|89781|Hermansky-Pudlak syndrome 4##AK290211|HPS4|89781|Hermansky-Pudlak syndrome 4	0.999216	CTCF.p2:18:0.999
chr2	9796634	9796783	reg1024961.p1	4.630	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-25583	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	-25659	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	-26095	-	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	186912	+	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	295142	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	387084	+	NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11	0.0	
chr4	40309805	40309985	reg1022934.p1	4.630	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-111254	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-251363	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-330302	-	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	27550	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	206689	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	208063	-	NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47	0.0	
chr6	37018026	37018157	reg1027145.p1	4.630	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-44590	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-63821	-	AK022783 TSC_hg19_v1_chr6_-_36953950 AF176006 AF192559 BC125055 BC153873 NM_014341 BC110914	-64114	-	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	120031	+	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	207295	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	207508	+	BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##AK022783|MTCH1|23787|mitochondrial carrier 1##AF176006|MTCH1|23787|mitochondrial carrier 1##AF192559|MTCH1|23787|mitochondrial carrier 1##BC125055|MTCH1|23787|mitochondrial carrier 1##BC153873|MTCH1|23787|mitochondrial carrier 1##NM_014341|MTCH1|23787|mitochondrial carrier 1##BC110914|MTCH1|23787|mitochondrial carrier 1##NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B	0.0	
chrX	56829819	56829939	reg1004127.p3	4.630	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-74188	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-239828	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-570969	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	192092	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	318049	-	BC071694 NM_019003	334178	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.228786	CTCF.p2:27:0.229
chr11	22152367	22152475	reg1026545.p2	4.629	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	-1461229	+	NM_004211 AF085412	-1531474	+	BC047226 TSC_hg19_v1_chr11_+_20409261 AK301449 AK298185 AK300591 BC037544 AB590779 EU831425 EU831518	-1743161	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	62226	+	AB032435 NM_020346	207245	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	494940	-	AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##BC047226|PRMT3|10196|protein arginine methyltransferase 3##AK301449|PRMT3|10196|protein arginine methyltransferase 3##AK298185|PRMT3|10196|protein arginine methyltransferase 3##AK300591|PRMT3|10196|protein arginine methyltransferase 3##BC037544|PRMT3|10196|protein arginine methyltransferase 3##EU831425|PRMT3|10196|protein arginine methyltransferase 3##EU831518|PRMT3|10196|protein arginine methyltransferase 3##AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F	0.908193	CTCF.p2:6:0.908
chr11	62742716	62742821	reg1030319.p1	4.629	+	BC022984 NM_000738 AJ006520 TSC_hg19_v1_chr11_-_62689135	-53695	-	BC007740 AK312374 TSC_hg19_v1_chr11_-_62688827	-53985	-	TSC_hg19_v1_chr11_+_62649170 AK308797 AK311592 AF055031	-93576	+	AK298374 AF057039 AF104038 AF124373 AB009698 AB009697 AK091879 BC033682 AK055764 NM_004790 NM_153276 NM_153277 NM_153278	9664	-	AK307850 AK298341 AB042505 AK298351 AK313187 BC022387 NM_001184732 NM_001184733 NM_001184736 NM_004254	40530	-	BC034394 NM_001136506	168924	-	BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1##NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1##AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1##BC007740|CHRM1|1128|cholinergic receptor, muscarinic 1##AK312374|CHRM1|1128|cholinergic receptor, muscarinic 1##AK308797|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK311592|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AF055031|SLC3A2|6520|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2##AK298374|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF057039|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF104038|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF124373|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009698|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009697|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK091879|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##BC033682|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK055764|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_004790|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153276|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153277|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153278|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##BC034394|SLC22A24|283238|solute carrier family 22, member 24##NM_001136506|SLC22A24|283238|solute carrier family 22, member 24	0.134124	
chr12	107842095	107842232	reg1034486.p1	4.629	+	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	-129950	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-354553	-	BC030519 TSC_hg19_v1_chr12_-_107487328 D83702	-354830	-	AK127295 NM_001017523	132470	+	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	237504	+	AK056378 TSC_hg19_v1_chr12_-_108154899	312676	-	BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##BC030519|CRY1|1407|cryptochrome 1 (photolyase-like)##D83702|CRY1|1407|cryptochrome 1 (photolyase-like)##AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK056378|PRDM4|11108|PR domain containing 4	0.0	
chr1	39876728	39876830	reg1030009.p1	4.629	+	NM_015038	-1604	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-329691	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	-384771	+	TSC_hg19_v1_chr1_+_39922264 AK023821	45540	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	80566	+	BC029969 TSC_hg19_v1_chr1_-_40042150	165332	-	NM_015038|KIAA0754|643314|KIAA0754##AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a##BC029969|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)	0.228668	CTCF.p2:-9:0.229
chr14	92365720	92365854	reg1031570.p1	4.629	+	AK093876 AX748346 NM_001128596 TSC_hg19_v1_chr14_-_92333881	-31919	-	TSC_hg19_v1_chr14_-_92302762 BC040503 BX647828 AK126359 NM_001128595 NM_152332	-62995	-	BC126214 BC126216 AK126034 NM_024764	-167390	-	AF112152 AF093118 BX248290 BC022280 TSC_hg19_v1_chr14_-_92413757 AK075147	47987	-	TSC_hg19_v1_chr14_-_92414010 AY358898 NM_006329	48237	-	BC146845 AF007217 BC002656 BC069008 TSC_hg19_v1_chr14_-_92506382 Y12490 BC142956 AK307489 NM_004239	140563	-	AK093876|TC2N|123036|tandem C2 domains, nuclear##NM_001128596|TC2N|123036|tandem C2 domains, nuclear##BC040503|TC2N|123036|tandem C2 domains, nuclear##BX647828|TC2N|123036|tandem C2 domains, nuclear##AK126359|TC2N|123036|tandem C2 domains, nuclear##NM_001128595|TC2N|123036|tandem C2 domains, nuclear##NM_152332|TC2N|123036|tandem C2 domains, nuclear##BC126214|CATSPERB|79820|cation channel, sperm-associated, beta##BC126216|CATSPERB|79820|cation channel, sperm-associated, beta##AK126034|CATSPERB|79820|cation channel, sperm-associated, beta##NM_024764|CATSPERB|79820|cation channel, sperm-associated, beta##AF112152|FBLN5|10516|fibulin 5##AF093118|FBLN5|10516|fibulin 5##BX248290|FBLN5|10516|fibulin 5##BC022280|FBLN5|10516|fibulin 5##AK075147|FBLN5|10516|fibulin 5##AY358898|FBLN5|10516|fibulin 5##NM_006329|FBLN5|10516|fibulin 5##BC146845|TRIP11|9321|thyroid hormone receptor interactor 11##AF007217|TRIP11|9321|thyroid hormone receptor interactor 11##BC002656|TRIP11|9321|thyroid hormone receptor interactor 11##BC069008|TRIP11|9321|thyroid hormone receptor interactor 11##Y12490|TRIP11|9321|thyroid hormone receptor interactor 11##AK307489|TRIP11|9321|thyroid hormone receptor interactor 11##NM_004239|TRIP11|9321|thyroid hormone receptor interactor 11	0.0	
chr4	181749711	181749827	reg1032863.p1	4.629	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-3386126	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-3386176	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-3386228	-	TSC_hg19_v1_chr4_+_183065111 AK308489	1315356	+	NM_001080477 HE578284 HE578285	1495385	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	2088761	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.439186	CTCF.p2:-3:0.439
chr5	169775168	169775315	reg1030428.p2	4.629	+	TSC_hg19_v1_chr5_-_169724821 NM_005565	-50390	-	AK292890 TSC_hg19_v1_chr5_-_169724784 AK300000	-50443	-	TSC_hg19_v1_chr5_-_169724734 BC016618 AK310369	-50486	-	DQ148476 NM_001034838	5639	+	TSC_hg19_v1_chr5_+_169816493 AK311026	41255	+	BC025707 NM_004137 AK313979	41406	-	NM_005565|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK292890|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK300000|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ148476|KCNIP1|30820|Kv channel interacting protein 1##NM_001034838|KCNIP1|30820|Kv channel interacting protein 1##BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1	0.0	
chr7	4652707	4652887	reg1031698.p2	4.629	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	-1311798	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	-1569335	-	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-1768989	-	TSC_hg19_v1_chr7_+_4721925 NM_001037165	69041	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	69454	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	162464	+	AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_001037165|FOXK1|221937|forkhead box K1##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415	0.0	
chrX	70829142	70829253	reg1030718.p2	4.629	+	NM_052957	-31324	+	TSC_hg19_v1_chrX_+_70765496 AL050366	-63675	+	TSC_hg19_v1_chrX_+_70752953 AK026724 AK300267 BX537844 BC038180 BC014434	-76234	+	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	9135	-	NM_001145139 NM_001145140	108937	-	NM_001145139 NM_001145140	153942	+	NM_052957|ACRC|93953|acidic repeat containing##AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##AK300267|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BX537844|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BC038180|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BC014434|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49	0.110807	
chr11	70267381	70267468	reg1030145.p1	4.628	+	TSC_hg19_v1_chr11_+_70244653 NM_001184740 NM_005231 NM_138565 AK222613 AK291097 BC033889 BC008799 M98343	-22771	+	TSC_hg19_v1_chr11_-_70244476 AK125463	-22909	-	D49354 TSC_hg19_v1_chr11_+_70194450	-73003	+	AF141901 BC114484 BC113876 TSC_hg19_v1_chr11_-_70507895	240443	-	TSC_hg19_v1_chr11_-_70507919 AB208027 NM_133266	240494	-	BC093885 BC112097 BC143389 TSC_hg19_v1_chr11_-_70507947	240526	-	NM_001184740|CTTN|2017|cortactin##NM_005231|CTTN|2017|cortactin##NM_138565|CTTN|2017|cortactin##AK222613|CTTN|2017|cortactin##AK291097|CTTN|2017|cortactin##BC033889|CTTN|2017|cortactin##BC008799|CTTN|2017|cortactin##M98343|CTTN|2017|cortactin##D49354|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##AF141901|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC114484|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC113876|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AB208027|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##NM_133266|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC093885|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC112097|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC143389|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2	0.828366	CTCF.p2:-10:0.828
chr12	124086291	124086419	reg1023947.p1	4.628	+	TSC_hg19_v1_chr12_+_124069100 X92098 BC025957 CU693080 CR541663 CR541682	-17214	+	TSC_hg19_v1_chr12_+_124069098 AK298167 AK312975 AK303189	-17266	+	TSC_hg19_v1_chr12_+_124069077 NM_006815	-17290	+	TSC_hg19_v1_chr12_+_124086677 AK307384 AK301043 AK074219 NM_020936 AL833756 BC030020 CU688806	319	+	CR456831 AB528638 BC104188 BC104189 X95648 TSC_hg19_v1_chr12_-_124118195 BC103763	31794	-	TSC_hg19_v1_chr12_-_124118210 AK294815 NM_001414	31904	-	X92098|TMED2|10959|transmembrane emp24 domain trafficking protein 2##BC025957|TMED2|10959|transmembrane emp24 domain trafficking protein 2##CR541663|TMED2|10959|transmembrane emp24 domain trafficking protein 2##CR541682|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK298167|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK312975|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK303189|TMED2|10959|transmembrane emp24 domain trafficking protein 2##NM_006815|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK307384|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##AK301043|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##AK074219|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##NM_020936|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##AL833756|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##BC030020|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##CR456831|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##BC104188|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##BC104189|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##X95648|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##BC103763|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##AK294815|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##NM_001414|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa	0.0	
chr21	35321028	35321208	reg1026568.p4	4.628	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-33026	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-130448	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-306263	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	124723	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	124811	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	415228	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.0	
chr2	148447237	148447412	reg1028821.p1	4.628	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-3169403	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-3169693	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-3172121	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	154793	+	TSC_hg19_v1_chr2_+_148602300 AK314124	155011	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	155321	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.0	
chrX	26671836	26671947	reg1027835.p1	4.628	+	AK097561 BC067286 NM_173523	-461335	+	NM_173699 BC029525 AK057361	-515405	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-1637818	-	BC157859 NM_001136533	1093034	+	AK057527 NM_182506 BC101307 BC101309 BC101310	1154224	+	AK128123 NM_001017930	1327674	-	AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##NM_139058|ARX|170302|aristaless related homeobox##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	0.993453	CTCF.p2:3:0.993
chr10	105267202	105267332	reg1031077.p1	4.627	+	NM_004210 U87864	-13533	+	BC043367 NM_001129742	-28271	-	BC036193 BC036208 NM_001001412	-48622	-	AK299620 TSC_hg19_v1_chr10_+_105344798	77500	+	AB385330 TSC_hg19_v1_chr10_-_105420936	153641	-	TSC_hg19_v1_chr10_-_105421464 AK294454	154182	-	NM_004210|NEURL|9148|neuralized homolog (Drosophila)##U87864|NEURL|9148|neuralized homolog (Drosophila)##BC043367|CALHM3|119395|calcium homeostasis modulator 3##NM_001129742|CALHM3|119395|calcium homeostasis modulator 3##BC036193|CALHM1|255022|calcium homeostasis modulator 1##BC036208|CALHM1|255022|calcium homeostasis modulator 1##NM_001001412|CALHM1|255022|calcium homeostasis modulator 1##AK299620|NEURL|9148|neuralized homolog (Drosophila)##AK294454|SH3PXD2A|9644|SH3 and PX domains 2A	0.586908	CTCF.p2:7:0.587
chr14	94468100	94468179	reg1001209.p1	4.627	+	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	-25063	-	AK303686 TSC_hg19_v1_chr14_-_94442905	-25231	-	AB056723 NM_016150	-44373	-	TSC_hg19_v1_chr14_+_94492685 BC009615 BC068058 NM_023112	24564	+	AK025569 TSC_hg19_v1_chr14_+_94492747	24609	+	AB209382 AF161446 AK294613 TSC_hg19_v1_chr14_-_94547557 BC096826 AL136886 BC008847 BC009406 BX537533 AK296726 AK297232 AK304504 AK025162 AF214731 NM_020414	79387	-	AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##AK025569|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##AB209382|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AF161446|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK294613|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC096826|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AL136886|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC008847|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC009406|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BX537533|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK296726|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK297232|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK304504|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK025162|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AF214731|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##NM_020414|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24	0.032011	
chr19	40650070	40650250	reg1029744.p2	4.627	+	TSC_hg19_v1_chr19_-_40596843 AK091274 AX746890 NM_001010880 AK131328 BC021982 NM_001142577 NM_001142578 NM_001142579	-53348	-	TSC_hg19_v1_chr19_-_40562138 AK127063 NM_001005851	-88034	-	NM_178544 AK122968 AK292528 BC045649	-147175	+	TSC_hg19_v1_chr19_+_40697520 NM_002446 X90846 Z48615	47486	+	TSC_hg19_v1_chr19_-_40724275 AK054935 AK289550 BC029539 NM_152479	74128	-	AK023327 AK301833 NM_024877	82419	-	AK091274|ZNF780A|284323|zinc finger protein 780A##NM_001010880|ZNF780A|284323|zinc finger protein 780A##AK131328|ZNF780A|284323|zinc finger protein 780A##BC021982|ZNF780A|284323|zinc finger protein 780A##NM_001142577|ZNF780A|284323|zinc finger protein 780A##NM_001142578|ZNF780A|284323|zinc finger protein 780A##NM_001142579|ZNF780A|284323|zinc finger protein 780A##AK127063|ZNF780B|163131|zinc finger protein 780B##NM_001005851|ZNF780B|163131|zinc finger protein 780B##NM_178544|ZNF546|339327|zinc finger protein 546##AK122968|ZNF546|339327|zinc finger protein 546##AK292528|ZNF546|339327|zinc finger protein 546##BC045649|ZNF546|339327|zinc finger protein 546##NM_002446|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##X90846|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##Z48615|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##AK054935|TTC9B|148014|tetratricopeptide repeat domain 9B##AK289550|TTC9B|148014|tetratricopeptide repeat domain 9B##BC029539|TTC9B|148014|tetratricopeptide repeat domain 9B##NM_152479|TTC9B|148014|tetratricopeptide repeat domain 9B##AK023327|CNTD2|79935|cyclin N-terminal domain containing 2##AK301833|CNTD2|79935|cyclin N-terminal domain containing 2##NM_024877|CNTD2|79935|cyclin N-terminal domain containing 2	0.0	
chr1	94198233	94198320	reg1025118.p1	4.627	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	-50949	-	TSC_hg19_v1_chr1_+_94057602 BC084562	-140669	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-140736	+	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	146438	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	146472	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	176686	-	U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit	0.0	
chr2	224854045	224854155	reg1034317.p1	4.627	+	TSC_hg19_v1_chr2_+_224822174 NM_022915 AK022763 BC012058 AK024052 CR457293 CU680184	-31947	+	TSC_hg19_v1_chr2_-_224810053 BC065934 NM_020830 AJ310568	-44035	-	TSC_hg19_v1_chr2_-_224810031 BC021065	-44068	-	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	12528	-	AK295564 NM_001136530	49240	-	TSC_hg19_v1_chr2_-_224904004 BC015663 AK225823 AK297588 AK312499 NM_001136528 NM_006216	50070	-	NM_022915|MRPL44|65080|mitochondrial ribosomal protein L44##AK022763|MRPL44|65080|mitochondrial ribosomal protein L44##BC012058|MRPL44|65080|mitochondrial ribosomal protein L44##AK024052|MRPL44|65080|mitochondrial ribosomal protein L44##CR457293|MRPL44|65080|mitochondrial ribosomal protein L44##BC065934|WDFY1|57590|WD repeat and FYVE domain containing 1##NM_020830|WDFY1|57590|WD repeat and FYVE domain containing 1##AJ310568|WDFY1|57590|WD repeat and FYVE domain containing 1##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##BC015663|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK225823|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK297588|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK312499|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136528|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_006216|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	0.446342	CTCF.p2:10:0.446
chr3	107395721	107395820	reg1029419.p1	4.627	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-153921	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-299460	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-436178	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	414103	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	545522	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	619631	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.645497	CTCF.p2:-15:0.645
chr5	139252103	139252249	reg1025631.p1	4.627	+	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	-76770	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	-191784	+	AF151029 TSC_hg19_v1_chr5_+_139060229	-191964	+	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	170552	-	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	170669	-	TSC_hg19_v1_chr5_+_139493703 M96684 NM_005859 BC110574 BC110594 BC036087 AB464679 BT019388	241551	+	AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2##M96684|PURA|5813|purine-rich element binding protein A##NM_005859|PURA|5813|purine-rich element binding protein A##BC110574|PURA|5813|purine-rich element binding protein A##BC110594|PURA|5813|purine-rich element binding protein A##BC036087|PURA|5813|purine-rich element binding protein A##BT019388|PURA|5813|purine-rich element binding protein A	0.06292	
chr9	130732721	130732879	reg1032325.p1	4.627	+	BC137087 BC137088 BC047949 NM_203305 BC142952	-19869	-	BC015233 NM_003863	-32038	-	TSC_hg19_v1_chr9_-_130700134 AF061729 BC107863 AB013361 AK312121	-32657	-	TSC_hg19_v1_chr9_-_130742813 AK058004 NM_001035254	10009	-	AK122729 NM_197956	96798	-	TSC_hg19_v1_chr9_+_130830492 AK290991 NM_001006641	97683	+	BC137087|FAM102A|399665|family with sequence similarity 102, member A##BC137088|FAM102A|399665|family with sequence similarity 102, member A##BC047949|FAM102A|399665|family with sequence similarity 102, member A##NM_203305|FAM102A|399665|family with sequence similarity 102, member A##BC142952|FAM102A|399665|family with sequence similarity 102, member A##BC015233|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##NM_003863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AF061729|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##BC107863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AB013361|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK312121|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK058004|FAM102A|399665|family with sequence similarity 102, member A##NM_001035254|FAM102A|399665|family with sequence similarity 102, member A##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1##AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	0.0	
chr10	112259348	112259438	reg1025458.p1	4.626	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-1642	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-194693	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-194800	-	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	68099	+	AF067163 TSC_hg19_v1_chr10_+_112344155	84722	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	144736	+	NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20	0.091298	
chr1	117113017	117113171	reg1028323.p1	4.626	+	TSC_hg19_v1_chr1_-_116961216 AK309389	-151856	-	TSC_hg19_v1_chr1_-_116961205 BC007373 BC018892 BC028281 BC069003 AK309872 BC098428	-151904	-	AK296362 NM_001160234	-187103	+	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	521	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	583	-	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	97289	-	AK309389|ATP1A1OS|84852|ATP1A1 opposite strand##BC007373|ATP1A1OS|84852|ATP1A1 opposite strand##BC018892|ATP1A1OS|84852|ATP1A1 opposite strand##BC028281|ATP1A1OS|84852|ATP1A1 opposite strand##BC069003|ATP1A1OS|84852|ATP1A1 opposite strand##AK309872|ATP1A1OS|84852|ATP1A1 opposite strand##BC098428|ATP1A1OS|84852|ATP1A1 opposite strand##AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3	0.023072	
chrX	105284049	105284171	reg1037219.p1	4.626	+	TSC_hg19_v1_chrX_-_105282719 AK310778 NM_000354	-1381	-	TSC_hg19_v1_chrX_+_105066559 AK131549	-217544	+	TSC_hg19_v1_chrX_+_105066535 BX538345 NM_198465 BC108702	-217572	+	BC031229 NM_001171020 NM_152423	128187	+	NM_001184782 NM_018015 TSC_hg19_v1_chrX_+_105855208 BC047503 AK001040 BC070110 AK291730 BC011483 BC033709 BC054032 CU687040 CU689708	571124	+	BC036901 NM_024539 AK126553	652965	+	AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##AK131549|NRK|203447|Nik related kinase##BX538345|NRK|203447|Nik related kinase##NM_198465|NRK|203447|Nik related kinase##BC108702|NRK|203447|Nik related kinase##BC031229|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_001171020|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_152423|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_001184782|CXorf57|55086|chromosome X open reading frame 57##NM_018015|CXorf57|55086|chromosome X open reading frame 57##BC047503|CXorf57|55086|chromosome X open reading frame 57##AK001040|CXorf57|55086|chromosome X open reading frame 57##BC070110|CXorf57|55086|chromosome X open reading frame 57##AK291730|CXorf57|55086|chromosome X open reading frame 57##BC011483|CXorf57|55086|chromosome X open reading frame 57##BC033709|CXorf57|55086|chromosome X open reading frame 57##BC054032|CXorf57|55086|chromosome X open reading frame 57##BC036901|RNF128|79589|ring finger protein 128##NM_024539|RNF128|79589|ring finger protein 128##AK126553|RNF128|79589|ring finger protein 128	0.998175	CTCF.p2:4:0.998
chrX	114999545	114999725	reg1006155.p2	4.626	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-171767	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-202593	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-204029	+	BC003645 TSC_hg19_v1_chrX_-_115085443	85804	-	AK313927 NM_000686 X87723 U16957	302360	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	568132	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr12	123210697	123210850	reg1027983.p1	4.625	+	AK290930 BC038955 AK313212 BC047891 D10923 NM_006018	-9395	-	AK290915 BC056419 AY148884 BC063461 BC027965 NM_177551	-22901	-	TSC_hg19_v1_chr12_+_123011806 BC055410 AK303337 BC150278 D79988 NM_014708	-198969	+	BC095506 AY507143 EU809458 GQ129267 GQ129268 AK313955 BC066881 BC066882 BC066883 BC067484 AF345568 AF385431 AF385432 NM_032554	4232	-	TSC_hg19_v1_chr12_+_123237367 AF038554 AK299463 NM_003677 AB014731 BC007860 BC000925	26618	+	NM_201435 TSC_hg19_v1_chr12_+_123259079 BC060796 AY254201 AK097663 AK292466	48328	+	AK290930|HCAR3|8843|hydroxycarboxylic acid receptor 3##BC038955|HCAR3|8843|hydroxycarboxylic acid receptor 3##AK313212|HCAR3|8843|hydroxycarboxylic acid receptor 3##BC047891|HCAR3|8843|hydroxycarboxylic acid receptor 3##D10923|HCAR3|8843|hydroxycarboxylic acid receptor 3##NM_006018|HCAR3|8843|hydroxycarboxylic acid receptor 3##AK290915|HCAR2|338442|hydroxycarboxylic acid receptor 2##BC056419|HCAR2|338442|hydroxycarboxylic acid receptor 2##AY148884|HCAR2|338442|hydroxycarboxylic acid receptor 2##BC063461|HCAR2|338442|hydroxycarboxylic acid receptor 2##BC027965|HCAR2|338442|hydroxycarboxylic acid receptor 2##NM_177551|HCAR2|338442|hydroxycarboxylic acid receptor 2##AK303337|KNTC1|9735|kinetochore associated 1##BC150278|KNTC1|9735|kinetochore associated 1##D79988|KNTC1|9735|kinetochore associated 1##NM_014708|KNTC1|9735|kinetochore associated 1##BC095506|HCAR1|27198|hydroxycarboxylic acid receptor 1##AY507143|HCAR1|27198|hydroxycarboxylic acid receptor 1##EU809458|HCAR1|27198|hydroxycarboxylic acid receptor 1##GQ129267|HCAR1|27198|hydroxycarboxylic acid receptor 1##GQ129268|HCAR1|27198|hydroxycarboxylic acid receptor 1##AK313955|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066881|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066882|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066883|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC067484|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF345568|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF385431|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF385432|HCAR1|27198|hydroxycarboxylic acid receptor 1##NM_032554|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF038554|DENR|8562|density-regulated protein##AK299463|DENR|8562|density-regulated protein##NM_003677|DENR|8562|density-regulated protein##AB014731|DENR|8562|density-regulated protein##BC007860|DENR|8562|density-regulated protein##BC000925|DENR|8562|density-regulated protein##NM_201435|CCDC62|84660|coiled-coil domain containing 62##BC060796|CCDC62|84660|coiled-coil domain containing 62##AY254201|CCDC62|84660|coiled-coil domain containing 62##AK097663|CCDC62|84660|coiled-coil domain containing 62##AK292466|CCDC62|84660|coiled-coil domain containing 62	0.0	
chr19	50181225	50181378	reg1026861.p1	4.625	+	AK295973 TSC_hg19_v1_chr19_+_50180493 AB590883 BC019268 AY775289 D66904 Y10805 Y10806 Y10807 BC109282 BC109283	-780	+	AK304660 NM_001207042 NM_001536 NM_198318 TSC_hg19_v1_chr19_+_50180491	-852	+	AB590882 TSC_hg19_v1_chr19_+_50169270 BC007724	-12114	+	BC032764 NM_001101340	10629	+	AL359598 TSC_hg19_v1_chr19_+_50192561	11199	+	TSC_hg19_v1_chr19_+_50194384 NM_001136052 NM_001199752 NM_001199753 NM_152359 AK096516 AK289713 AK309087 AK290092 BC029104 AF357970	13085	+	AK295973|PRMT1|3276|protein arginine methyltransferase 1##BC019268|PRMT1|3276|protein arginine methyltransferase 1##AY775289|PRMT1|3276|protein arginine methyltransferase 1##D66904|PRMT1|3276|protein arginine methyltransferase 1##Y10805|PRMT1|3276|protein arginine methyltransferase 1##Y10806|PRMT1|3276|protein arginine methyltransferase 1##Y10807|PRMT1|3276|protein arginine methyltransferase 1##BC109282|PRMT1|3276|protein arginine methyltransferase 1##BC109283|PRMT1|3276|protein arginine methyltransferase 1##AK304660|PRMT1|3276|protein arginine methyltransferase 1##NM_001207042|PRMT1|3276|protein arginine methyltransferase 1##NM_001536|PRMT1|3276|protein arginine methyltransferase 1##NM_198318|PRMT1|3276|protein arginine methyltransferase 1##BC007724|BCL2L12|83596|BCL2-like 12 (proline rich)##BC032764|C19orf76|199800|chromosome 19 open reading frame 76##NM_001101340|C19orf76|199800|chromosome 19 open reading frame 76##AL359598|C19orf76|199800|chromosome 19 open reading frame 76##NM_001136052|CPT1C|126129|carnitine palmitoyltransferase 1C##NM_001199752|CPT1C|126129|carnitine palmitoyltransferase 1C##NM_001199753|CPT1C|126129|carnitine palmitoyltransferase 1C##NM_152359|CPT1C|126129|carnitine palmitoyltransferase 1C##AK096516|CPT1C|126129|carnitine palmitoyltransferase 1C##AK289713|CPT1C|126129|carnitine palmitoyltransferase 1C##AK309087|CPT1C|126129|carnitine palmitoyltransferase 1C##AK290092|CPT1C|126129|carnitine palmitoyltransferase 1C##BC029104|CPT1C|126129|carnitine palmitoyltransferase 1C##AF357970|CPT1C|126129|carnitine palmitoyltransferase 1C	1.009382	CTCF.p2:36:0.982
chr2	68348283	68348449	reg1028990.p1	4.625	+	NM_001190263 NM_001190265 NM_006333 NM_173177 TSC_hg19_v1_chr2_-_68290160	-58206	-	BC016284 TSC_hg19_v1_chr2_-_68290140 X95592 BC009584 BC009589 BC005235 AK290451	-58232	-	TSC_hg19_v1_chr2_+_67624467 NM_019002 AJ242682 BC033075 BC040001	-723884	+	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	36268	-	TSC_hg19_v1_chr2_+_68384999 BC008304 NM_020143 AK291715 AF349314 AF164799 AK313204 AK223118 L48692 AK225641 BC018152	36731	+	TSC_hg19_v1_chr2_-_68479665 AK307136 AK314893 BC027913 NM_000945	131229	-	NM_001190263|C1D|10438|C1D nuclear receptor corepressor##NM_001190265|C1D|10438|C1D nuclear receptor corepressor##NM_006333|C1D|10438|C1D nuclear receptor corepressor##NM_173177|C1D|10438|C1D nuclear receptor corepressor##BC016284|C1D|10438|C1D nuclear receptor corepressor##X95592|C1D|10438|C1D nuclear receptor corepressor##BC009584|C1D|10438|C1D nuclear receptor corepressor##BC009589|C1D|10438|C1D nuclear receptor corepressor##BC005235|C1D|10438|C1D nuclear receptor corepressor##AK290451|C1D|10438|C1D nuclear receptor corepressor##NM_019002|ETAA1|54465|Ewing tumor-associated antigen 1##AJ242682|ETAA1|54465|Ewing tumor-associated antigen 1##BC033075|ETAA1|54465|Ewing tumor-associated antigen 1##BC040001|ETAA1|54465|Ewing tumor-associated antigen 1##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92##BC008304|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_020143|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK291715|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF349314|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF164799|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK313204|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK223118|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK225641|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##BC018152|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha	0.017857	
chr11	111223828	111223901	reg1033830.p1	4.624	+	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	-53831	+	BC039669 NM_198498	-97158	+	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	-640579	-	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	26088	-	NM_006235	26292	-	BC031045 NM_017589	159206	-	AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##BC039669|C11orf53|341032|chromosome 11 open reading frame 53##NM_198498|C11orf53|341032|chromosome 11 open reading frame 53##AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##NM_006235|POU2AF1|5450|POU class 2 associating factor 1##BC031045|BTG4|54766|B-cell translocation gene 4##NM_017589|BTG4|54766|B-cell translocation gene 4	0.032317	
chr11	65835841	65835945	reg1027137.p1	4.624	+	TSC_hg19_v1_chr11_+_65819834 NM_006842 AK290850 BC010372 BC053577 BX537771 AB463285 BC000401 U41371	-16053	+	AB053232 NM_033036	-19243	-	AF407333 AB527999 CU689580 BC036522 BC032950 NM_053054	-41975	-	TSC_hg19_v1_chr11_+_65837841 AK096644 NM_018026 AK098336 AY320283 BC010096 BC052577	2017	+	TSC_hg19_v1_chr11_+_65984213 AB033001	148329	+	TSC_hg19_v1_chr11_+_65988172 BC055288	152302	+	NM_006842|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##AK290850|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BC053577|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BX537771|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BC000401|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##U41371|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##AB053232|GAL3ST3|89792|galactose-3-O-sulfotransferase 3##NM_033036|GAL3ST3|89792|galactose-3-O-sulfotransferase 3##AF407333|CATSPER1|117144|cation channel, sperm associated 1##BC036522|CATSPER1|117144|cation channel, sperm associated 1##BC032950|CATSPER1|117144|cation channel, sperm associated 1##NM_053054|CATSPER1|117144|cation channel, sperm associated 1##AK096644|PACS1|55690|phosphofurin acidic cluster sorting protein 1##NM_018026|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AK098336|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AY320283|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC010096|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC052577|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AB033001|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC055288|PACS1|55690|phosphofurin acidic cluster sorting protein 1	1.011402	CTCF.p2:-10:1.000
chr11	67433074	67433185	reg1032722.p2	4.624	+	AY032593 AY040761 AY169233 BC008689 NM_080658	-15011	-	BC113485 BC113487 AY229977 NM_005995	-26102	-	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	-35726	-	AK299956 TSC_hg19_v1_chr11_-_67442068	8914	-	TSC_hg19_v1_chr11_-_67442086 AK309277 NM_000695 AK092464	9002	-	BC007685 NM_001031615	15555	-	AY032593|ACY3|91703|aspartoacylase (aminocyclase) 3##AY040761|ACY3|91703|aspartoacylase (aminocyclase) 3##AY169233|ACY3|91703|aspartoacylase (aminocyclase) 3##BC008689|ACY3|91703|aspartoacylase (aminocyclase) 3##NM_080658|ACY3|91703|aspartoacylase (aminocyclase) 3##BC113485|TBX10|347853|T-box 10##BC113487|TBX10|347853|T-box 10##AY229977|TBX10|347853|T-box 10##NM_005995|TBX10|347853|T-box 10##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##AK299956|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2	0.0	
chr13	113343919	113344080	reg1033343.p2	4.624	+	AK129953 NM_207440	-42642	+	TSC_hg19_v1_chr13_-_113260770 AK125472	-83232	-	TSC_hg19_v1_chr13_-_113242484 AK314785	-101508	-	TSC_hg19_v1_chr13_-_113344130 AK057085	107	-	TSC_hg19_v1_chr13_+_113344493 NM_015205 NM_032189	580	+	TSC_hg19_v1_chr13_+_113622764 AB002360	278786	+	AK129953|C13orf35|400165|chromosome 13 open reading frame 35##NM_207440|C13orf35|400165|chromosome 13 open reading frame 35##AK314785|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK057085|LOC440149|440149|uncharacterized LOC440149##NM_015205|ATP11A|23250|ATPase, class VI, type 11A##NM_032189|ATP11A|23250|ATPase, class VI, type 11A##AB002360|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	0.0	
chr14	91839897	91840078	reg1032335.p2	4.624	+	BC098567 NM_003485	-119793	-	BC128536 NM_001177676	-129136	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-258960	+	TSC_hg19_v1_chr14_-_91884159 AF070587	44161	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	44188	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	136513	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.0	
chr17	27198327	27198468	reg1025443.p2	4.624	+	TSC_hg19_v1_chr17_+_27182033 AB049388 AK023342 AY007435 BX537542 BC019094 NM_005702 CU676380 DQ892626 DQ895866 AF082657 AF082658	-16374	+	BC021228 TSC_hg19_v1_chr17_-_27169811 BX647766 AK299477 AK001562 AK057665 NM_001077498 NM_018182	-28607	-	TSC_hg19_v1_chr17_-_27139467 AK095569	-58950	-	M60922 CU678570 AB528533 BC003683 TSC_hg19_v1_chr17_-_27224641	26211	-	TSC_hg19_v1_chr17_-_27224717 NM_004475	26315	-	AX795344 TSC_hg19_v1_chr17_-_27229986 AX795345 AX795340 AX795338 AX795342 BC015582 AX795337 AX795341 AX795339 AX795335 AX795336 AK296017 AX795346 AX795343 AY358566 NM_144683	31608	-	AB049388|ERAL1|26284|Era G-protein-like 1 (E. coli)##AK023342|ERAL1|26284|Era G-protein-like 1 (E. coli)##AY007435|ERAL1|26284|Era G-protein-like 1 (E. coli)##BX537542|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC019094|ERAL1|26284|Era G-protein-like 1 (E. coli)##NM_005702|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ892626|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ895866|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082657|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082658|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC021228|C17orf63|55731|chromosome 17 open reading frame 63##BX647766|C17orf63|55731|chromosome 17 open reading frame 63##AK299477|C17orf63|55731|chromosome 17 open reading frame 63##AK001562|C17orf63|55731|chromosome 17 open reading frame 63##AK057665|C17orf63|55731|chromosome 17 open reading frame 63##NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63##NM_018182|C17orf63|55731|chromosome 17 open reading frame 63##AK095569|C17orf63|55731|chromosome 17 open reading frame 63##M60922|FLOT2|2319|flotillin 2##BC003683|FLOT2|2319|flotillin 2##NM_004475|FLOT2|2319|flotillin 2##BC015582|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AK296017|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AY358566|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##NM_144683|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13	0.0	
chr1	75199517	75199624	reg1029066.p1	4.624	+	NM_001130042 NM_001130043 NM_001134759 NM_001889	-479	-	NM_001162916 AK098237 BC071765 NM_138467 AK294264 AK299849 BC009514 AK311272 AB590606	-690	+	TSC_hg19_v1_chr1_-_75198733 AK128794 BX647883 BC039578 AK223150 AK223201 AB209714 AK314813 BC070058	-858	-	NM_001001933 BC040321	394549	+	AK128063 BC028743 BC034580 BC051740 NM_001130058 NM_152697 AK093170 AX747970	877211	-	AK299573 TSC_hg19_v1_chr1_-_76081791	882176	-	NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001162916|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK098237|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC071765|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##NM_138467|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK294264|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK299849|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC009514|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK311272|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK128794|CRYZ|1429|crystallin, zeta (quinone reductase)##BX647883|CRYZ|1429|crystallin, zeta (quinone reductase)##BC039578|CRYZ|1429|crystallin, zeta (quinone reductase)##AK223150|CRYZ|1429|crystallin, zeta (quinone reductase)##AK223201|CRYZ|1429|crystallin, zeta (quinone reductase)##AB209714|CRYZ|1429|crystallin, zeta (quinone reductase)##AK314813|CRYZ|1429|crystallin, zeta (quinone reductase)##BC070058|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001001933|LHX8|431707|LIM homeobox 8##BC040321|LHX8|431707|LIM homeobox 8##AK128063|SLC44A5|204962|solute carrier family 44, member 5##BC028743|SLC44A5|204962|solute carrier family 44, member 5##BC034580|SLC44A5|204962|solute carrier family 44, member 5##BC051740|SLC44A5|204962|solute carrier family 44, member 5##NM_001130058|SLC44A5|204962|solute carrier family 44, member 5##NM_152697|SLC44A5|204962|solute carrier family 44, member 5##AK093170|SLC44A5|204962|solute carrier family 44, member 5##AK299573|SLC44A5|204962|solute carrier family 44, member 5	0.187677	
chr2	111873788	111873935	reg1004473.p2	4.624	+	AK300513 NM_001142807 BC022268	-383682	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-438039	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-438218	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	4626	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	767765	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	767900	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.0	
chr3	21794384	21794511	reg1031047.p2	4.624	+	AK026072 NM_024697	-1632	-	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-1566773	-	BC070075 TSC_hg19_v1_chr3_+_20081907 BC060823 AB527402	-1712537	+	AK310298 TSC_hg19_v1_chr3_-_22414124	619687	-	TSC_hg19_v1_chr3_+_23244600 AK307075	1450136	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	1450308	+	AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC070075|KAT2B|8850|K(lysine) acetyltransferase 2B##BC060823|KAT2B|8850|K(lysine) acetyltransferase 2B##AK310298|ZNF385D|79750|zinc finger protein 385D##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2	0.0	
chr5	1134809	1134910	reg1029422.p2	4.624	+	CU675797 AF105365 TSC_hg19_v1_chr5_-_1112151 AK302856 BC098390 BC007760 BC018982 NM_006598	-22702	-	TSC_hg19_v1_chr5_+_1008916 BC012176 AF358137 AB062887 NM_033120	-125826	+	TSC_hg19_v1_chr5_-_997422 AK126199 NM_001242737	-137424	-	AK096054 AK290811 NM_001003841 BC146290 BC148801 AB527217 AY591756 AY596807	66878	+	AK055798 NM_182632 AK298257 BC056757	90631	+	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	160232	-	AF105365|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK302856|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC098390|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC007760|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC018982|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##NM_006598|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC012176|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF358137|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AB062887|NKD2|85409|naked cuticle homolog 2 (Drosophila)##NM_033120|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AK126199|LOC100506688|100506688|uncharacterized LOC100506688##NM_001242737|LOC100506688|100506688|uncharacterized LOC100506688##AK096054|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK290811|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##NM_001003841|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC146290|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC148801|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY591756|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY596807|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK055798|SLC6A18|348932|solute carrier family 6, member 18##NM_182632|SLC6A18|348932|solute carrier family 6, member 18##AK298257|SLC6A18|348932|solute carrier family 6, member 18##BC056757|SLC6A18|348932|solute carrier family 6, member 18##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase	0.059209	
chr5	95170704	95170871	reg1030605.p1	4.624	+	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	-12267	-	AF162769 BT006689 CR450312 CR542165 DQ892497 DQ895709 CU679866 D21238 AF069668 BC106075 X76648 TSC_hg19_v1_chr5_-_95158431 AK311868 BC005304 BC010965	-12387	-	TSC_hg19_v1_chr5_+_95067531 CU691986 AB385392	-103251	+	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	126711	-	TSC_hg19_v1_chr5_-_95297609 BC028412 NM_012081	126898	-	AK308575 NM_001177876	577901	-	NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##AF162769|GLRX|2745|glutaredoxin (thioltransferase)##BT006689|GLRX|2745|glutaredoxin (thioltransferase)##CR450312|GLRX|2745|glutaredoxin (thioltransferase)##CR542165|GLRX|2745|glutaredoxin (thioltransferase)##DQ892497|GLRX|2745|glutaredoxin (thioltransferase)##DQ895709|GLRX|2745|glutaredoxin (thioltransferase)##D21238|GLRX|2745|glutaredoxin (thioltransferase)##AF069668|GLRX|2745|glutaredoxin (thioltransferase)##BC106075|GLRX|2745|glutaredoxin (thioltransferase)##X76648|GLRX|2745|glutaredoxin (thioltransferase)##AK311868|GLRX|2745|glutaredoxin (thioltransferase)##BC005304|GLRX|2745|glutaredoxin (thioltransferase)##BC010965|GLRX|2745|glutaredoxin (thioltransferase)##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2##BC028412|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_012081|ELL2|22936|elongation factor, RNA polymerase II, 2##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1	0.040781	
chr6	43682873	43683054	reg1029081.p2	4.624	+	TSC_hg19_v1_chr6_-_43655539 NM_001193343 NM_018135	-27415	-	TSC_hg19_v1_chr6_-_43655521 CU679679 DQ884400 AK300757 BC010364 AK307183 AB049952	-27444	-	NM_001193341 NM_152732 AK291399 BC029519 AK055407	-70167	+	TSC_hg19_v1_chr6_+_43737947 NM_001025366 NM_001025367 NM_001025368 NM_001025369 NM_001025370 NM_001033756 NM_001171622 NM_001171623 NM_001171624 NM_001171625 NM_001171626 NM_001171627 NM_001171628 NM_001171629 NM_001171630 NM_001204384 NM_001204385 NM_003376 BC058855 BC019867	55055	+	TSC_hg19_v1_chr6_+_43738284 AF022375	55284	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	55571	+	NM_001193343|MRPS18A|55168|mitochondrial ribosomal protein S18A##NM_018135|MRPS18A|55168|mitochondrial ribosomal protein S18A##DQ884400|MRPS18A|55168|mitochondrial ribosomal protein S18A##AK300757|MRPS18A|55168|mitochondrial ribosomal protein S18A##BC010364|MRPS18A|55168|mitochondrial ribosomal protein S18A##AK307183|MRPS18A|55168|mitochondrial ribosomal protein S18A##AB049952|MRPS18A|55168|mitochondrial ribosomal protein S18A##NM_001193341|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##NM_152732|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##AK291399|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##BC029519|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##AK055407|RSPH9|221421|radial spoke head 9 homolog (Chlamydomonas)##NM_001025366|VEGFA|7422|vascular endothelial growth factor A##NM_001025367|VEGFA|7422|vascular endothelial growth factor A##NM_001025368|VEGFA|7422|vascular endothelial growth factor A##NM_001025369|VEGFA|7422|vascular endothelial growth factor A##NM_001025370|VEGFA|7422|vascular endothelial growth factor A##NM_001033756|VEGFA|7422|vascular endothelial growth factor A##NM_001171622|VEGFA|7422|vascular endothelial growth factor A##NM_001171623|VEGFA|7422|vascular endothelial growth factor A##NM_001171624|VEGFA|7422|vascular endothelial growth factor A##NM_001171625|VEGFA|7422|vascular endothelial growth factor A##NM_001171626|VEGFA|7422|vascular endothelial growth factor A##NM_001171627|VEGFA|7422|vascular endothelial growth factor A##NM_001171628|VEGFA|7422|vascular endothelial growth factor A##NM_001171629|VEGFA|7422|vascular endothelial growth factor A##NM_001171630|VEGFA|7422|vascular endothelial growth factor A##NM_001204384|VEGFA|7422|vascular endothelial growth factor A##NM_001204385|VEGFA|7422|vascular endothelial growth factor A##NM_003376|VEGFA|7422|vascular endothelial growth factor A##BC058855|VEGFA|7422|vascular endothelial growth factor A##BC019867|VEGFA|7422|vascular endothelial growth factor A##AF022375|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A	0.0	
chr1	234247384	234247470	reg1023594.p1	4.623	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-206815	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-497508	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	-497604	+	TSC_hg19_v1_chr1_+_234350005 BC037878	102579	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	261945	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	367433	-	AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##BC037878|SLC35F3|148641|solute carrier family 35, member F3##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1	0.030601	
chr12	63670658	63670782	reg1028704.p2	4.623	+	NM_000706	-124131	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	-126049	-	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	-341795	-	BC125215 BC125216 TSC_hg19_v1_chr12_-_64062283 AY358792 AL833344 AK310102 AK057511 BC068442 NM_173812	391576	-	TSC_hg19_v1_chr12_+_64173629 AB015633 NM_014254 BC013152 BC002596 AK289382 CU680528 DQ891077 DQ894259	502947	+	BX647105 BX647419 TSC_hg19_v1_chr12_+_64173925	503215	+	NM_000706|AVPR1A|552|arginine vasopressin receptor 1A##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A##BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC125215|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC125216|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AY358792|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AL833344|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK310102|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK057511|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC068442|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_173812|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AB015633|TMEM5|10329|transmembrane protein 5##NM_014254|TMEM5|10329|transmembrane protein 5##BC013152|TMEM5|10329|transmembrane protein 5##BC002596|TMEM5|10329|transmembrane protein 5##AK289382|TMEM5|10329|transmembrane protein 5##DQ891077|TMEM5|10329|transmembrane protein 5##DQ894259|TMEM5|10329|transmembrane protein 5##BX647105|TMEM5|10329|transmembrane protein 5##BX647419|TMEM5|10329|transmembrane protein 5	0.958769	CTCF.p2:-7:0.959
chr14	44363832	44363986	reg1028796.p1	4.623	+	NM_152447 AK096627	-2287142	+	BC053537 BC068566 BC030611 NM_203301	-4462248	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-4462552	-	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	612566	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	1002589	+	BC121009 BC121010 TSC_hg19_v1_chr14_-_45431102	1067187	-	NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28##BC121009|KLHL28|54813|kelch-like 28 (Drosophila)##BC121010|KLHL28|54813|kelch-like 28 (Drosophila)	0.811737	CTCF.p2:29:0.812
chr14	72187838	72187941	reg1030019.p1	4.623	+	AF090989 AF090990 NM_015556	-191848	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-813438	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-813756	+	AK294895 NM_001204423	210927	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	211264	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	211977	+	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6	0.870582	CTCF.p2:-9:0.871
chr19	3061489	3061602	reg1030452.p1	4.623	+	X73358 TSC_hg19_v1_chr19_-_3061344	-248	-	AK308137 NM_001144761	-13913	-	AK293407 NM_001144762	-31934	-	X73357 TSC_hg19_v1_chr19_-_3062347 U04241 AF072902 AK314713 NM_001130 NM_198970	737	-	TSC_hg19_v1_chr19_-_3062919 AB527754 HQ258149 BC113735 BC113737 NM_198969 AK094591	1462	-	TSC_hg19_v1_chr19_+_3094359 BC089041 NM_002067	32813	+	X73358|AES|166|amino-terminal enhancer of split##AK308137|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##NM_001144761|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##AK293407|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##NM_001144762|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##X73357|AES|166|amino-terminal enhancer of split##U04241|AES|166|amino-terminal enhancer of split##AF072902|AES|166|amino-terminal enhancer of split##AK314713|AES|166|amino-terminal enhancer of split##NM_001130|AES|166|amino-terminal enhancer of split##NM_198970|AES|166|amino-terminal enhancer of split##HQ258149|AES|166|amino-terminal enhancer of split##BC113735|AES|166|amino-terminal enhancer of split##BC113737|AES|166|amino-terminal enhancer of split##NM_198969|AES|166|amino-terminal enhancer of split##AK094591|AES|166|amino-terminal enhancer of split##BC089041|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##NM_002067|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)	0.065981	
chr21	45620297	45620385	reg1041121.p1	4.623	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-66780	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-66836	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-93042	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	40425	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	40516	-	AF194032 NM_013369 NM_175867	61757	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.011775	
chr15	31685261	31685441	reg1027598.p3	4.622	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-66013	+	NM_001243538	-162302	-	GQ502181 HM135791 NM_001252020	-231923	-	AJ430383 NM_130901	262190	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	477478	-	TSC_hg19_v1_chr15_-_32162898 AK126002	477592	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr17	22048347	22048440	reg1027940.p1	4.622	+	NM_001190452	-25957	+	TSC_hg19_v1_chr17_-_21454933 AK056436 BC132738 BC136630 BC019938 BC010612 BC052777 BC053952 NM_001113434	-593470	-	FJ434338 NM_001194958	-739946	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	3572729	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	3572888	+	BC035488 BC042106 NM_014238	3750636	+	NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##AK056436|C17orf51|339263|chromosome 17 open reading frame 51##BC132738|C17orf51|339263|chromosome 17 open reading frame 51##BC136630|C17orf51|339263|chromosome 17 open reading frame 51##BC019938|C17orf51|339263|chromosome 17 open reading frame 51##BC010612|C17orf51|339263|chromosome 17 open reading frame 51##BC052777|C17orf51|339263|chromosome 17 open reading frame 51##BC053952|C17orf51|339263|chromosome 17 open reading frame 51##NM_001113434|C17orf51|339263|chromosome 17 open reading frame 51##FJ434338|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##NM_001194958|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1	0.889042	CTCF.p2:10:0.889
chr2	69603014	69603139	reg1027604.p2	4.622	+	TSC_hg19_v1_chr2_+_69240310 NM_018153 NM_032208 NM_053034 AF279145 AK001463 AY928974 AY928975 AY928976 AY928977 AK223273 BC012074 AK309553 AF421380 AK292113 CU680200 EU832615 EU832687	-362693	+	AB039886 AJ966789 NM_019617 AB590637 AY139184 AK098489 AY456961 BC059778 AY359050	-401334	+	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	-423020	-	TSC_hg19_v1_chr2_-_69614353 M90516 BC045641 NM_001244710 NM_002056	11329	-	AJ132584 AF132967 AB528729 HQ258750 TSC_hg19_v1_chr2_-_69664568 AK300700 AK308567	61497	-	TSC_hg19_v1_chr2_-_69664606 AY286306 AY286307 BX538347	61538	-	NM_018153|ANTXR1|84168|anthrax toxin receptor 1##NM_032208|ANTXR1|84168|anthrax toxin receptor 1##NM_053034|ANTXR1|84168|anthrax toxin receptor 1##AF279145|ANTXR1|84168|anthrax toxin receptor 1##AK001463|ANTXR1|84168|anthrax toxin receptor 1##AK223273|ANTXR1|84168|anthrax toxin receptor 1##BC012074|ANTXR1|84168|anthrax toxin receptor 1##AK309553|ANTXR1|84168|anthrax toxin receptor 1##AF421380|ANTXR1|84168|anthrax toxin receptor 1##AK292113|ANTXR1|84168|anthrax toxin receptor 1##EU832615|ANTXR1|84168|anthrax toxin receptor 1##EU832687|ANTXR1|84168|anthrax toxin receptor 1##AB039886|GKN1|56287|gastrokine 1##AJ966789|GKN1|56287|gastrokine 1##NM_019617|GKN1|56287|gastrokine 1##AY139184|GKN1|56287|gastrokine 1##AK098489|GKN1|56287|gastrokine 1##AY456961|GKN1|56287|gastrokine 1##BC059778|GKN1|56287|gastrokine 1##AY359050|GKN1|56287|gastrokine 1##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2##M90516|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##BC045641|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_001244710|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_002056|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##AJ132584|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AF132967|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##HQ258750|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK300700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK308567|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286306|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286307|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BX538347|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	0.993392	CTCF.p2:0:0.993
chr2	7913634	7913813	reg1029500.p1	4.622	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-856136	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-895860	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-907020	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	908480	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1063996	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1230098	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr3	23909005	23909143	reg1028114.p1	4.622	+	AK295354 NM_001202476	-57141	+	AK314854 TSC_hg19_v1_chr3_+_23847474	-61600	+	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	-61664	+	NM_001253379 NM_001253384 NM_002948	49220	+	TSC_hg19_v1_chr3_-_23958419 BC012145 BC066940	49366	-	TSC_hg19_v1_chr3_-_23958512 NM_020345	49445	-	NM_001202476|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##AK314854|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_001253379|RPL15|6138|ribosomal protein L15##NM_001253384|RPL15|6138|ribosomal protein L15##NM_002948|RPL15|6138|ribosomal protein L15##BC012145|NKIRAS1|28512|NFKB inhibitor interacting Ras-like 1##BC066940|NKIRAS1|28512|NFKB inhibitor interacting Ras-like 1##NM_020345|NKIRAS1|28512|NFKB inhibitor interacting Ras-like 1	0.623782	CTCF.p2:-7:0.624
chr5	149232831	149233012	reg1004097.p2	4.622	+	AK123614 NM_001172699	-81419	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	-123045	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	-123094	+	BC144044 BC035909 AB593141 M26061 NM_000440	91397	-	TSC_hg19_v1_chr5_+_149340320 NM_000112	107387	+	TSC_hg19_v1_chr5_+_149340352 AK312596	107430	+	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144044|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##BC035909|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##AB593141|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##M26061|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000440|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2	0.0	
chrX	108716694	108716783	reg1026743.p1	4.622	+	NM_003604 AF007567	-737116	-	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	-1033654	+	BT007228 L22763 U04845 NM_001847 BC005305	-1034075	-	NM_001522 L37378	8547	-	AK023289 NM_018698 BC120984 BC120985	62276	+	NM_001242617 TSC_hg19_v1_chrX_+_108780077 AF201942 BC014888 AF212223	63345	+	NM_003604|IRS4|8471|insulin receptor substrate 4##AF007567|IRS4|8471|insulin receptor substrate 4##BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##NM_001522|GUCY2F|2986|guanylate cyclase 2F, retinal##L37378|GUCY2F|2986|guanylate cyclase 2F, retinal##AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2##AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2##BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2##AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2	0.030818	
chr1	9486461	9486601	reg1026316.p2	4.620	+	TSC_hg19_v1_chr1_+_9415945 CU677397	-70585	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	-133562	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	-133594	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	113001	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	113105	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	162425	+	AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201	0.0	
chr8	61839012	61839122	reg1026330.p1	4.620	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-247665	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-247779	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-409317	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	361483	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	763279	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	787951	-	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase	0.0	
chr1	112099062	112099195	reg1028368.p2	4.619	+	NM_000677 NM_020683	-52386	-	TSC_hg19_v1_chr1_+_112016601 BC017973 NM_174896	-82530	+	TSC_hg19_v1_chr1_+_111992132 X60221	-106974	+	BC041707 BC064411 NM_001081976	7451	-	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	63339	+	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	182827	-	NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##BC017973|C1orf162|128346|chromosome 1 open reading frame 162##NM_174896|C1orf162|128346|chromosome 1 open reading frame 162##X60221|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1##BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B	0.013301	
chr14	107256667	107256799	reg1030819.p1	4.619	+	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	-37735	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	-45432	-	JF810265 DQ454799 FJ840007 FJ840015 DQ454561 DQ454955 DQ454612 DQ454663 DQ454685 FJ840092 FJ840295 FJ873837 AJ008218 JF810272 JF810273 AY003862 AJ132562 Y08732 AF103327 EU099062 EU620029 GQ504979 HQ392897 AF103116 AF103087 AF103100 HM774925 JN110942 HM774229 FJ385350 GQ504960 HM774112 HM774402 HM774448 HM774462 HM774524 HM774766 HM775010 AF103135 HM774927 HM774932 HM774189 U00529 Y14940 AF103057 AF103351 EU146338 L03141 L03153 AF029328 AF485459 DQ431489 L03143 L03173 L03177 AF035801 AY423195 AY423198 AY423206 DQ431488 DQ431492 HM995020 DQ431490 GU570297 HM152513 HM994969 HM994972 HM994977 HM994978 HM994981 HM994982 HM994989 HM995522 HM995532 HM996141 HM996526 DQ187603 DQ187629 DQ322887 DQ322888 DQ322889 DQ322890 DQ322960 DQ840663 DQ840674 DQ840675 DQ840677 DQ840678 DQ840680 DQ840681 DQ840682 DQ840683 DQ840687 DQ840758 DQ840769 DQ840770 DQ840771 DQ840773 DQ840781 DQ840844 DQ840857 DQ840859 DQ840860 DQ840863 DQ840910 DQ840917 DQ840918 AF021973 AF048774 AF115122 AF151702 AF174111 AJ238039 AJ579199 AJ579279 AY866726 AY866767 DQ100754 DQ100773 DQ100787 DQ100849 DQ100977 DQ840729 DQ926055 DQ926218 DQ926255 DQ926308 EF177956 EF178021 GQ267831 U96395 X99352 Y17142 AB063699 AB063849 AB063916 AB067258 AB363156 AF021945 AF129753 AF471200 AF471528 AF471540 AF471541 AF471542 AF471546 AJ300788 AJ389185 AJ556647 AJ556667 AJ579161 AY554174 AY554177 AY554178 AY573190 AY640527 AY640562 AY846273 AY971106 D83679 DQ065693 DQ535269 DQ535318 DQ535335 DQ535453 DQ535464 DQ535482 DQ926153 DQ926492 EF178117 EF178127 EF178131 EU835555 FJ195515 FJ492899 FN563769 GU570345 GU570350 HQ378386 JF806284 U97244 X99353 L33033 Z11950 BC033178 TSC_hg19_v1_chr14_-_107199472	-57433	-	DQ205161 AY392971 AF085654 X58399 X58398 BC002792 TSC_hg19_v1_chr14_-_107259820	2987	-	None	None	None	None	None	None	Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC033178|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##X58399|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##X58398|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##BC002792|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)	0.0	
chr8	63317757	63317866	reg1030433.p1	4.619	+	TSC_hg19_v1_chr8_+_63161499 AK096949 NM_173688 AX721226 AB463913	-156247	+	TSC_hg19_v1_chr8_+_63161185 AK299689	-156605	+	TSC_hg19_v1_chr8_-_62627167 NM_001164754 NM_001164755 NM_001164756 NM_004318 NM_032466	-690622	-	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	633587	-	NM_003878	633798	-	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	680816	-	AK096949|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_173688|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##AK299689|NKAIN3|286183|Na+/K+ transporting ATPase interacting 3##NM_001164754|ASPH|444|aspartate beta-hydroxylase##NM_001164755|ASPH|444|aspartate beta-hydroxylase##NM_001164756|ASPH|444|aspartate beta-hydroxylase##NM_004318|ASPH|444|aspartate beta-hydroxylase##NM_032466|ASPH|444|aspartate beta-hydroxylase##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##NM_003878|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein	0.131123	
chrUn_gl000224	77617	77704	reg1027886.p1	4.619	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.830069	CTCF.p2:-8:0.830
chrX	29921668	29921754	reg1029337.p2	4.619	+	AF181284 AJ243874 NM_014271	-1316092	+	AK128123 NM_001017930	-1922146	-	AK057527 NM_182506 BC101307 BC101309 BC101310	-2095596	+	NM_002364 AF015766 AK313347 BC026071 AK223081	311972	+	AK057441 NM_002365	326841	+	NM_002367 AK313769 BC032852 DQ891236 DQ894421 CR541779	338443	+	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##NM_002364|MAGEB2|4113|melanoma antigen family B, 2##AF015766|MAGEB2|4113|melanoma antigen family B, 2##AK313347|MAGEB2|4113|melanoma antigen family B, 2##BC026071|MAGEB2|4113|melanoma antigen family B, 2##AK223081|MAGEB2|4113|melanoma antigen family B, 2##AK057441|MAGEB3|4114|melanoma antigen family B, 3##NM_002365|MAGEB3|4114|melanoma antigen family B, 3##NM_002367|MAGEB4|4115|melanoma antigen family B, 4##AK313769|MAGEB4|4115|melanoma antigen family B, 4##BC032852|MAGEB4|4115|melanoma antigen family B, 4##DQ891236|MAGEB4|4115|melanoma antigen family B, 4##DQ894421|MAGEB4|4115|melanoma antigen family B, 4##CR541779|MAGEB4|4115|melanoma antigen family B, 4	0.619068	CTCF.p2:-21:0.619
chr11	67168998	67169094	reg1031480.p1	4.618	+	NM_001243224	-8271	+	TSC_hg19_v1_chr11_+_67159464 BC014848 NM_004584 U53174 AK315348 CR536508	-9578	+	AK298052 NM_001166212	-27399	-	BT006629 AB464100 S57501 TSC_hg19_v1_chr11_-_67169297 AK313586 X70848 M63960 BC004482 BC001888	228	-	TSC_hg19_v1_chr11_-_67169325 BC008010	271	-	TSC_hg19_v1_chr11_-_67169351 NM_001008709 NM_002708 NM_206873	311	-	NM_001243224|RAD9A|5883|RAD9 homolog A (S. pombe)##BC014848|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_004584|RAD9A|5883|RAD9 homolog A (S. pombe)##U53174|RAD9A|5883|RAD9 homolog A (S. pombe)##AK315348|RAD9A|5883|RAD9 homolog A (S. pombe)##CR536508|RAD9A|5883|RAD9 homolog A (S. pombe)##AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1##BT006629|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##S57501|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##AK313586|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##X70848|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##M63960|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC004482|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC001888|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC008010|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##NM_001008709|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##NM_002708|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##NM_206873|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme	0.015624	
chr7	44672886	44673015	reg1029464.p1	4.618	+	TSC_hg19_v1_chr7_+_44646225 D10523 BC004964 BC014617	-26722	+	TSC_hg19_v1_chr7_+_44646197 AK314179	-26753	+	AK304439 TSC_hg19_v1_chr7_+_44646190	-26758	+	TSC_hg19_v1_chr7_+_44788175 BC110435	115232	+	TSC_hg19_v1_chr7_+_44788465 AK090415 NM_031449	115541	+	NM_174929 BC131780 BC016968 AY426594 AF357908	122867	+	D10523|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC004964|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC014617|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##AK314179|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##AK304439|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2##NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2##NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2	0.0	
chr11	116967267	116967447	reg1033079.p1	4.617	+	X00566 TSC_hg19_v1_chr11_-_116708339 AX752114 AX752116 BC005380 NM_000039 AK292231 BC110286	-259002	-	TSC_hg19_v1_chr11_+_116700622 BC121081 BC134419 NM_000040 BC027977	-266733	+	HQ258218 HQ258399 BC113594 BC113596 BC074764 X13629 M13654 NM_000482 TSC_hg19_v1_chr11_-_116694025	-273391	-	BC128511 BC128510 NM_025164 BC121188 TSC_hg19_v1_chr11_-_116969081	1676	-	TSC_hg19_v1_chr11_+_117015002 NM_001184746 NM_001184747 NM_001184748 NM_002572 AK292973 AK307366 BC000398 BC019301 BC039721 D63390 BC001774 DQ836738 DQ836739 DQ836740 DQ836741 DQ836742 DQ836743	47676	+	TSC_hg19_v1_chr11_+_117049458 AK292501	82200	+	X00566|APOA1|335|apolipoprotein A-I##BC005380|APOA1|335|apolipoprotein A-I##NM_000039|APOA1|335|apolipoprotein A-I##AK292231|APOA1|335|apolipoprotein A-I##BC110286|APOA1|335|apolipoprotein A-I##BC121081|APOC3|345|apolipoprotein C-III##BC134419|APOC3|345|apolipoprotein C-III##NM_000040|APOC3|345|apolipoprotein C-III##BC027977|APOC3|345|apolipoprotein C-III##HQ258218|APOA4|337|apolipoprotein A-IV##HQ258399|APOA4|337|apolipoprotein A-IV##BC113594|APOA4|337|apolipoprotein A-IV##BC113596|APOA4|337|apolipoprotein A-IV##BC074764|APOA4|337|apolipoprotein A-IV##X13629|APOA4|337|apolipoprotein A-IV##M13654|APOA4|337|apolipoprotein A-IV##NM_000482|APOA4|337|apolipoprotein A-IV##BC128511|SIK3|23387|SIK family kinase 3##BC128510|SIK3|23387|SIK family kinase 3##NM_025164|SIK3|23387|SIK family kinase 3##BC121188|SIK3|23387|SIK family kinase 3##NM_001184746|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184747|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184748|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_002572|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292973|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK307366|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC000398|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC019301|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC039721|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##D63390|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC001774|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836738|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836739|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836740|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836741|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836742|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836743|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292501|SIDT2|51092|SID1 transmembrane family, member 2	0.0	
chr1	235242823	235243003	reg1027297.p1	4.617	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-347139	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-497667	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-499055	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	49176	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	49318	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	81650	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr11	76758107	76758218	reg1011536.p1	4.616	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	-12703	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	-186169	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	-186230	+	TSC_hg19_v1_chr11_+_76778017 BC018123 NM_004055 AK128124 AK313132 AK310978 AK094150 AB209087	19865	+	CU686775 BC069115 BC069365 NM_006189	55722	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	81166	+	NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##BC018123|CAPN5|726|calpain 5##NM_004055|CAPN5|726|calpain 5##AK128124|CAPN5|726|calpain 5##AK313132|CAPN5|726|calpain 5##AK310978|CAPN5|726|calpain 5##AK094150|CAPN5|726|calpain 5##AB209087|CAPN5|726|calpain 5##BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA	0.098446	
chr12	50605630	50605746	reg1030701.p1	4.616	+	AK023649 AF157325 NM_001243775	-10379	-	TSC_hg19_v1_chr12_-_50561153 AK298924	-44463	-	TSC_hg19_v1_chr12_-_50561112 AK026014	-44563	-	AF198455 AK297766 TSC_hg19_v1_chr12_-_50616438 NM_001113547	10768	-	BC136763 BC144402 BC144403 TSC_hg19_v1_chr12_-_50677266 AK000372 AK314447 AF198454 AL136911 AK222971 AB209512 BC110815 NM_001113546 NM_016357	71607	-	BC054024 AL833333 NM_001145475	184709	-	AK023649|LIMA1|51474|LIM domain and actin binding 1##AF157325|LIMA1|51474|LIM domain and actin binding 1##NM_001243775|LIMA1|51474|LIM domain and actin binding 1##AK298924|CERS5|91012|ceramide synthase 5##AK026014|CERS5|91012|ceramide synthase 5##AF198455|LIMA1|51474|LIM domain and actin binding 1##AK297766|LIMA1|51474|LIM domain and actin binding 1##NM_001113547|LIMA1|51474|LIM domain and actin binding 1##BC136763|LIMA1|51474|LIM domain and actin binding 1##BC144402|LIMA1|51474|LIM domain and actin binding 1##BC144403|LIMA1|51474|LIM domain and actin binding 1##AK000372|LIMA1|51474|LIM domain and actin binding 1##AK314447|LIMA1|51474|LIM domain and actin binding 1##AF198454|LIMA1|51474|LIM domain and actin binding 1##AL136911|LIMA1|51474|LIM domain and actin binding 1##AK222971|LIMA1|51474|LIM domain and actin binding 1##AB209512|LIMA1|51474|LIM domain and actin binding 1##BC110815|LIMA1|51474|LIM domain and actin binding 1##NM_001113546|LIMA1|51474|LIM domain and actin binding 1##NM_016357|LIMA1|51474|LIM domain and actin binding 1##BC054024|FAM186A|121006|family with sequence similarity 186, member A##AL833333|FAM186A|121006|family with sequence similarity 186, member A##NM_001145475|FAM186A|121006|family with sequence similarity 186, member A	0.0	
chr14	64108198	64108363	reg1028365.p2	4.616	+	BX248008 NM_001008726	-156	-	TSC_hg19_v1_chr14_-_64010089 BC056156 BC034994	-98191	-	TSC_hg19_v1_chr14_-_64010080 AK313500 BC013154 NM_006246	-98206	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	282	-	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	86469	-	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	211415	+	BX248008|WDR89|112840|WD repeat domain 89##NM_001008726|WDR89|112840|WD repeat domain 89##BC056156|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC034994|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AK313500|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC013154|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##NM_006246|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2	0.0	
chr15	70328149	70328325	reg1029700.p2	4.616	+	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-583016	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-620875	-	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	-621491	+	BC015421 TSC_hg19_v1_chr15_-_70341948	13672	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	61990	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	62006	-	NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.0	
chr3	5019253	5019433	reg1025300.p2	4.616	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-484147	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-484215	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-484312	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	1773	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	1838	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	2011	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.029164	
chr6	157982586	157982726	reg1022993.p1	4.616	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-180117	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-237439	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-238072	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	261633	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	261718	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	420231	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.0	
chr6_dbb_hap3	4047142	4047309	reg1032520.p2	4.616	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.931804	CTCF.p2:-4:0.932
chr7	114996350	114996466	reg1023839.p2	4.616	+	BC040713 TSC_hg19_v1_chr7_+_114562979 AY196485	-433452	+	TSC_hg19_v1_chr7_+_114562148 AF054589 NM_001166345 NM_001166346 NM_199072	-434234	+	AF467253 NM_001172767 NM_148899 U80741 AF467258 AF467259 TSC_hg19_v1_chr7_+_114066703	-929778	+	AJ608795 NM_001244583	611958	-	TSC_hg19_v1_chr7_-_115670796 D43945 BC029891	674378	-	TSC_hg19_v1_chr7_-_115670820 AK313546	674410	-	BC040713|MDFIC|29969|MyoD family inhibitor domain containing##AY196485|MDFIC|29969|MyoD family inhibitor domain containing##AF054589|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166345|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166346|MDFIC|29969|MyoD family inhibitor domain containing##NM_199072|MDFIC|29969|MyoD family inhibitor domain containing##AF467253|FOXP2|93986|forkhead box P2##NM_001172767|FOXP2|93986|forkhead box P2##NM_148899|FOXP2|93986|forkhead box P2##AF467258|FOXP2|93986|forkhead box P2##AF467259|FOXP2|93986|forkhead box P2##AJ608795|TFEC|22797|transcription factor EC##NM_001244583|TFEC|22797|transcription factor EC##D43945|TFEC|22797|transcription factor EC##BC029891|TFEC|22797|transcription factor EC##AK313546|TFEC|22797|transcription factor EC	0.8521	CTCF.p2:-15:0.852
chrX	114993524	114993705	reg1006452.p2	4.616	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-165746	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-196572	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-198008	+	BC003645 TSC_hg19_v1_chrX_-_115085443	91825	-	AK313927 NM_000686 X87723 U16957	308381	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	574153	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr15	53676776	53676886	reg1026512.p1	4.615	+	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-594637	-	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	-705950	-	TSC_hg19_v1_chr15_-_52861344 BC100015 AL833077	-815454	-	AK096055 BX537884 NM_182758	375016	-	NM_001080534	628269	+	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	1812261	-	BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##BC100015|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AL833077|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1	0.99526	CTCF.p2:-20:0.995
chr15	80271225	80271406	reg1024558.p1	4.615	+	AB464467 BT007103 CR541937 CR541962 DQ891109 DQ894290 AY234180 U27467 AL110097 BC016281 AK304026 TSC_hg19_v1_chr15_-_80263526 U29680 Y09397 NM_001114735 NM_004049	-7764	-	TSC_hg19_v1_chr15_-_80216042 AF249277	-55277	-	NM_001100880 NM_001199757	-55652	-	NM_001242911 NM_001242912 NM_001242917 NM_001242918 NM_019006 TSC_hg19_v1_chr15_+_80351970 AF061739	80627	+	TSC_hg19_v1_chr15_+_80352031 BC005283 AK312646	80714	+	TSC_hg19_v1_chr15_+_80352046 AL136598	80752	+	BT007103|BCL2A1|597|BCL2-related protein A1##CR541937|BCL2A1|597|BCL2-related protein A1##CR541962|BCL2A1|597|BCL2-related protein A1##DQ891109|BCL2A1|597|BCL2-related protein A1##DQ894290|BCL2A1|597|BCL2-related protein A1##AY234180|BCL2A1|597|BCL2-related protein A1##U27467|BCL2A1|597|BCL2-related protein A1##AL110097|BCL2A1|597|BCL2-related protein A1##BC016281|BCL2A1|597|BCL2-related protein A1##U29680|BCL2A1|597|BCL2-related protein A1##Y09397|BCL2A1|597|BCL2-related protein A1##NM_001114735|BCL2A1|597|BCL2-related protein A1##NM_004049|BCL2A1|597|BCL2-related protein A1##AF249277|ST20|400410|suppressor of tumorigenicity 20##NM_001100880|ST20|400410|suppressor of tumorigenicity 20##NM_001199757|ST20|400410|suppressor of tumorigenicity 20##NM_001242911|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242912|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242917|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242918|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_019006|ZFAND6|54469|zinc finger, AN1-type domain 6##AF061739|ZFAND6|54469|zinc finger, AN1-type domain 6##BC005283|ZFAND6|54469|zinc finger, AN1-type domain 6##AK312646|ZFAND6|54469|zinc finger, AN1-type domain 6##AL136598|ZFAND6|54469|zinc finger, AN1-type domain 6	0.0	
chr3	39195438	39195504	reg1022523.p4	4.615	+	NM_033027 TSC_hg19_v1_chr3_-_39195146	-347	-	TSC_hg19_v1_chr3_-_39195053 BC038949 AB053121 BC028213	-420	-	NM_001105513 NM_145755 AJ487015 BC062621 BC129948 AK022483 BC039691 AK302408 AK302465 CU687576	-46232	+	BC127119 BC139782 AY375160 NM_194293 TSC_hg19_v1_chr3_-_39234085 AJ626899 AJ626900 NM_001198621 AK096421 BX648565 CR749430	38614	-	U28934 BC028078 U20350 AK307911 AK312373 AK225764 BC017855 NM_001337	126031	-	NM_001171172	126458	-	NM_033027|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC038949|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##AB053121|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC028213|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##NM_001105513|TTC21A|199223|tetratricopeptide repeat domain 21A##NM_145755|TTC21A|199223|tetratricopeptide repeat domain 21A##AJ487015|TTC21A|199223|tetratricopeptide repeat domain 21A##BC062621|TTC21A|199223|tetratricopeptide repeat domain 21A##BC129948|TTC21A|199223|tetratricopeptide repeat domain 21A##AK022483|TTC21A|199223|tetratricopeptide repeat domain 21A##BC039691|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302408|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302465|TTC21A|199223|tetratricopeptide repeat domain 21A##BC127119|XIRP1|165904|xin actin-binding repeat containing 1##BC139782|XIRP1|165904|xin actin-binding repeat containing 1##AY375160|XIRP1|165904|xin actin-binding repeat containing 1##NM_194293|XIRP1|165904|xin actin-binding repeat containing 1##AJ626899|XIRP1|165904|xin actin-binding repeat containing 1##AJ626900|XIRP1|165904|xin actin-binding repeat containing 1##NM_001198621|XIRP1|165904|xin actin-binding repeat containing 1##AK096421|XIRP1|165904|xin actin-binding repeat containing 1##BX648565|XIRP1|165904|xin actin-binding repeat containing 1##CR749430|XIRP1|165904|xin actin-binding repeat containing 1##U28934|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC028078|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##U20350|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK307911|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK312373|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK225764|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC017855|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001337|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171172|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1	0.0	
chr4	139859609	139859714	reg1029908.p1	4.615	+	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	-696297	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-1406019	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-1406069	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	77332	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	145742	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	145950	-	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.04006	
chr7	100964907	100964977	reg1030600.p1	4.615	+	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-69376	-	TSC_hg19_v1_chr7_-_100888367 NM_016068	-76572	-	CU678480 BC003540 BC009428 TSC_hg19_v1_chr7_-_100888363 AF151893	-76617	-	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	96	-	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	41275	+	BC002778 NM_138403	307633	-	AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##NM_016068|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC003540|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC009428|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AF151893|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory	0.0	
chr8	124498889	124499022	reg1031169.p2	4.615	+	AK001066 NM_018024 AK225643 TSC_hg19_v1_chr8_+_124429026 AK293492 BC008781 AB528691 CU679103	-69929	+	CR749832 TSC_hg19_v1_chr8_-_124428591	-70357	-	TSC_hg19_v1_chr8_-_124408688 NM_014109	-90258	-	BC120963 BC120964 BC024030 NM_148177	45424	-	AY059629 AJ420108 TSC_hg19_v1_chr8_-_124553447 AK056986 EF143260	54395	-	TSC_hg19_v1_chr8_-_124553499 NM_001242463 NM_058229	54526	-	AK001066|WDYHV1|55093|WDYHV motif containing 1##NM_018024|WDYHV1|55093|WDYHV motif containing 1##AK225643|WDYHV1|55093|WDYHV motif containing 1##AK293492|WDYHV1|55093|WDYHV motif containing 1##BC008781|WDYHV1|55093|WDYHV motif containing 1##CR749832|ATAD2|29028|ATPase family, AAA domain containing 2##NM_014109|ATAD2|29028|ATPase family, AAA domain containing 2##BC120963|FBXO32|114907|F-box protein 32##BC120964|FBXO32|114907|F-box protein 32##BC024030|FBXO32|114907|F-box protein 32##NM_148177|FBXO32|114907|F-box protein 32##AY059629|FBXO32|114907|F-box protein 32##AJ420108|FBXO32|114907|F-box protein 32##AK056986|FBXO32|114907|F-box protein 32##EF143260|FBXO32|114907|F-box protein 32##NM_001242463|FBXO32|114907|F-box protein 32##NM_058229|FBXO32|114907|F-box protein 32	0.0	
chr10	65851802	65851924	reg1030574.p1	4.614	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-570622	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-570701	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-570748	+	NM_178011 BX640611 AY358315 BC111492	2833952	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	3573533	-	AF091606 AK313882 NM_013266	3604074	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.084032	
chr11	36562694	36562804	reg1028158.p1	4.614	+	TSC_hg19_v1_chr11_-_36531820 U78798 BC031052 AK292978 NM_004620 NM_145803	-30935	-	NM_001160169	-140203	+	NM_001160168 NM_024841 BX640959 AK024275	-165189	+	NM_000448 M29474	26819	+	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	53355	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	57053	-	U78798|TRAF6|7189|TNF receptor-associated factor 6##BC031052|TRAF6|7189|TNF receptor-associated factor 6##AK292978|TRAF6|7189|TNF receptor-associated factor 6##NM_004620|TRAF6|7189|TNF receptor-associated factor 6##NM_145803|TRAF6|7189|TNF receptor-associated factor 6##NM_001160169|PRR5L|79899|proline rich 5 like##NM_001160168|PRR5L|79899|proline rich 5 like##NM_024841|PRR5L|79899|proline rich 5 like##BX640959|PRR5L|79899|proline rich 5 like##AK024275|PRR5L|79899|proline rich 5 like##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2	0.682777	CTCF.p2:19:0.683
chr1	224924587	224924730	reg1027937.p1	4.614	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-120479	+	AB209887 NM_001115113 NM_025160	-302658	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-302898	-	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	192707	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	691071	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	691143	-	AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor	0.0	
chr13	24184325	24184469	reg1031761.p2	4.614	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	-30865	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-39942	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-176557	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	278619	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	279117	-	NM_001135816 BC142999	279195	+	BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.0	
chr20	52259768	52259949	reg1027492.p2	4.614	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-49059	-	AF041259 NM_006526	-60223	-	AK302570 NM_001193421	-458037	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	427204	-	AK315220 NM_003657	427445	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	530662	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr2	139789556	139789660	reg1027891.p2	4.614	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-251802	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-530118	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-530215	+	TSC_hg19_v1_chr2_-_142888540 AK054663	3098948	-	AF176832 NM_018557	3099661	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	3845598	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.996227	CTCF.p2:0:0.996
chr6	35916652	35916762	reg1031538.p2	4.614	+	TSC_hg19_v1_chr6_-_35888942 NM_003137	-27760	-	TSC_hg19_v1_chr6_-_35888914 AK292277 AK299591 BC038292	-27797	-	BX648663 BX648697 CU691556 TSC_hg19_v1_chr6_-_35888850 AJ318054 AK312712	-27874	-	BC025408 NM_138718 AK122928 NM_001193476 TSC_hg19_v1_chr6_-_35992359 AF331522 NM_052961	75633	-	NM_001315 NM_139012 NM_139013 NM_139014 TSC_hg19_v1_chr6_+_35995482	78766	+	TSC_hg19_v1_chr6_+_35995536 AK291709 L35263	78838	+	NM_003137|SRPK1|6732|SRSF protein kinase 1##AK292277|SRPK1|6732|SRSF protein kinase 1##AK299591|SRPK1|6732|SRSF protein kinase 1##BC038292|SRPK1|6732|SRSF protein kinase 1##BX648663|SRPK1|6732|SRSF protein kinase 1##BX648697|SRPK1|6732|SRSF protein kinase 1##AJ318054|SRPK1|6732|SRSF protein kinase 1##AK312712|SRPK1|6732|SRSF protein kinase 1##BC025408|SLC26A8|116369|solute carrier family 26, member 8##NM_138718|SLC26A8|116369|solute carrier family 26, member 8##AK122928|SLC26A8|116369|solute carrier family 26, member 8##NM_001193476|SLC26A8|116369|solute carrier family 26, member 8##AF331522|SLC26A8|116369|solute carrier family 26, member 8##NM_052961|SLC26A8|116369|solute carrier family 26, member 8##NM_001315|MAPK14|1432|mitogen-activated protein kinase 14##NM_139012|MAPK14|1432|mitogen-activated protein kinase 14##NM_139013|MAPK14|1432|mitogen-activated protein kinase 14##NM_139014|MAPK14|1432|mitogen-activated protein kinase 14##AK291709|MAPK14|1432|mitogen-activated protein kinase 14##L35263|MAPK14|1432|mitogen-activated protein kinase 14	0.01012	
chr1	12114881	12115028	reg1024324.p5	4.613	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-35384	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-35420	+	FJ618905 NM_021933	-35656	+	M83554 NM_001243 BC136400 BC171762 S75768	8590	+	D86042 BC063482 NM_152942 BC073839 BC141804	71062	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	112107	+	AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr11	34006345	34006462	reg1026847.p1	4.613	+	NM_005574 X61118	-92568	-	TSC_hg19_v1_chr11_-_33891485 NM_001142315	-114907	-	BC042426 TSC_hg19_v1_chr11_-_33891402 BC034041 NM_001142316	-115012	-	TSC_hg19_v1_chr11_+_34073238 BC001731 NM_005898 NM_203364	66810	+	TSC_hg19_v1_chr11_+_34073889 AK299720	67501	+	TSC_hg19_v1_chr11_+_34073950 Z48042	67534	+	NM_005574|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##X61118|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142315|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC042426|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC034041|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142316|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC001731|CAPRIN1|4076|cell cycle associated protein 1##NM_005898|CAPRIN1|4076|cell cycle associated protein 1##NM_203364|CAPRIN1|4076|cell cycle associated protein 1##AK299720|CAPRIN1|4076|cell cycle associated protein 1##Z48042|CAPRIN1|4076|cell cycle associated protein 1	0.903682	CTCF.p2:14:0.904
chr12	110474548	110474655	reg1021909.p1	4.613	+	AK302535 BC032833 TSC_hg19_v1_chr12_+_110437393 CU691256 AY364251	-37158	+	TSC_hg19_v1_chr12_+_110437339 AF064604	-37268	+	TSC_hg19_v1_chr12_+_110437234 AK025261 BC057817 NM_033121	-37340	+	TSC_hg19_v1_chr12_-_110486328 AK021447 BC041968	11728	-	AK097461 NM_207435	30898	-	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	87620	+	AK302535|ANKRD13A|88455|ankyrin repeat domain 13A##BC032833|ANKRD13A|88455|ankyrin repeat domain 13A##AY364251|ANKRD13A|88455|ankyrin repeat domain 13A##AF064604|ANKRD13A|88455|ankyrin repeat domain 13A##AK025261|ANKRD13A|88455|ankyrin repeat domain 13A##BC057817|ANKRD13A|88455|ankyrin repeat domain 13A##NM_033121|ANKRD13A|88455|ankyrin repeat domain 13A##AK021447|C12orf76|400073|chromosome 12 open reading frame 76##BC041968|C12orf76|400073|chromosome 12 open reading frame 76##AK097461|C12orf76|400073|chromosome 12 open reading frame 76##NM_207435|C12orf76|400073|chromosome 12 open reading frame 76##NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	0.058832	
chr14	62137943	62138108	reg1031296.p2	4.613	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-349498	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-389503	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-389831	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	24165	+	FJ790247 NM_001243084	26314	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	91094	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.057866	
chr14	65268659	65268767	reg1026209.p1	4.613	+	TSC_hg19_v1_chr14_+_65171243 BC129952 BC129953	-97435	+	TSC_hg19_v1_chr14_+_65171178 BX248779 NM_015549	-97541	+	TSC_hg19_v1_chr14_+_65016678 AK058044 NM_172365 BC068989	-252068	+	AB384944 BC136284 BC136285 NM_000347 NM_001024858	21125	-	J05500 AB209415 TSC_hg19_v1_chr14_-_65346722	77930	-	NM_001202558 NM_001202559 NM_001204063 NM_001204064 NM_145165 BC020550 TSC_hg19_v1_chr14_+_65381175 AK315905 AF060510 AK057626	112414	+	BC129952|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BC129953|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BX248779|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##NM_015549|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##AK058044|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##NM_172365|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##BC068989|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##BC136284|SPTB|6710|spectrin, beta, erythrocytic##BC136285|SPTB|6710|spectrin, beta, erythrocytic##NM_000347|SPTB|6710|spectrin, beta, erythrocytic##NM_001024858|SPTB|6710|spectrin, beta, erythrocytic##J05500|SPTB|6710|spectrin, beta, erythrocytic##AB209415|SPTB|6710|spectrin, beta, erythrocytic##NM_001202558|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##NM_001202559|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##NM_001204063|CHURC1|91612|churchill domain containing 1##NM_001204064|CHURC1|91612|churchill domain containing 1##NM_145165|CHURC1|91612|churchill domain containing 1##BC020550|CHURC1|91612|churchill domain containing 1##AK315905|CHURC1|91612|churchill domain containing 1##AF060510|CHURC1|91612|churchill domain containing 1##AK057626|CHURC1|91612|churchill domain containing 1	0.797068	CTCF.p2:-33:0.797
chr2	149322992	149323109	reg1031015.p1	4.613	+	NM_181742	-543878	-	TSC_hg19_v1_chr2_+_148778636 NM_018328 EF542797	-544441	+	TSC_hg19_v1_chr2_-_148778310 AK225092 BC005388 AF022108 AF047598 AF132596 BC014847 AK295721 AK291989 AK294878 AK298862 NM_001190882 NM_001190879 AK299749 NM_002552 NM_001190881 NM_181741	-544688	-	TSC_hg19_v1_chr2_+_149402332 AK125789	79286	+	NM_015630 AF286904 BC093818 BC093820	79553	+	TSC_hg19_v1_chr2_+_149632795 NM_004522 BC002721 BC025961 AB011103	309746	+	NM_181742|ORC4|5000|origin recognition complex, subunit 4##NM_018328|MBD5|55777|methyl-CpG binding domain protein 5##EF542797|MBD5|55777|methyl-CpG binding domain protein 5##AK225092|ORC4|5000|origin recognition complex, subunit 4##BC005388|ORC4|5000|origin recognition complex, subunit 4##AF022108|ORC4|5000|origin recognition complex, subunit 4##AF047598|ORC4|5000|origin recognition complex, subunit 4##AF132596|ORC4|5000|origin recognition complex, subunit 4##BC014847|ORC4|5000|origin recognition complex, subunit 4##AK295721|ORC4|5000|origin recognition complex, subunit 4##AK291989|ORC4|5000|origin recognition complex, subunit 4##AK294878|ORC4|5000|origin recognition complex, subunit 4##AK298862|ORC4|5000|origin recognition complex, subunit 4##NM_001190882|ORC4|5000|origin recognition complex, subunit 4##NM_001190879|ORC4|5000|origin recognition complex, subunit 4##AK299749|ORC4|5000|origin recognition complex, subunit 4##NM_002552|ORC4|5000|origin recognition complex, subunit 4##NM_001190881|ORC4|5000|origin recognition complex, subunit 4##NM_181741|ORC4|5000|origin recognition complex, subunit 4##AK125789|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##NM_015630|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##AF286904|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##BC093818|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##BC093820|EPC2|26122|enhancer of polycomb homolog 2 (Drosophila)##NM_004522|KIF5C|3800|kinesin family member 5C##BC002721|KIF5C|3800|kinesin family member 5C##BC025961|KIF5C|3800|kinesin family member 5C##AB011103|KIF5C|3800|kinesin family member 5C	0.431254	CTCF.p2:-9:0.431
chr3	171825420	171825533	reg1026850.p2	4.613	+	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-67139	+	TSC_hg19_v1_chr3_+_171757442 AY358367	-68018	+	TSC_hg19_v1_chr3_+_171757437 AK127826	-68042	+	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	340747	-	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	415702	-	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	603414	-	AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AY358367|FNDC3B|64778|fibronectin type III domain containing 3B##AK127826|FNDC3B|64778|fibronectin type III domain containing 3B##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1	0.013422	
chr4	110623993	110624157	reg1014340.p1	4.613	+	TSC_hg19_v1_chr4_+_110481443 NM_017918 AK291098 BC002633 AK095936 AK311030	-142658	+	TSC_hg19_v1_chr4_+_110354993 BC040137 AK300278	-268900	+	BC117135 BC143268 BC143269 BC143276 TSC_hg19_v1_chr4_+_110354970 NM_001042734 NM_006323	-269127	+	AB590350 DQ894589 EU176306 U20537 TSC_hg19_v1_chr4_-_110624602 BC000305 BC004460 NM_001226 NM_032992 U20536	516	-	DQ892725 DQ896860 CU677869 TSC_hg19_v1_chr4_-_110651216 AF306567 AF332892 AY359024 BC017218 AK075389 AK313081 NM_030821	27047	-	AB590959 CU676662 J02770 TSC_hg19_v1_chr4_-_110723176 AK290625 BC005275 Y00318 BC020718 AK299232	99091	-	NM_017918|CCDC109B|55013|coiled-coil domain containing 109B##AK291098|CCDC109B|55013|coiled-coil domain containing 109B##BC002633|CCDC109B|55013|coiled-coil domain containing 109B##AK095936|CCDC109B|55013|coiled-coil domain containing 109B##AK311030|CCDC109B|55013|coiled-coil domain containing 109B##BC040137|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##AK300278|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC117135|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143268|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143269|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143276|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_001042734|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_006323|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##DQ892725|PLA2G12A|81579|phospholipase A2, group XIIA##DQ896860|PLA2G12A|81579|phospholipase A2, group XIIA##AF306567|PLA2G12A|81579|phospholipase A2, group XIIA##AF332892|PLA2G12A|81579|phospholipase A2, group XIIA##AY359024|PLA2G12A|81579|phospholipase A2, group XIIA##BC017218|PLA2G12A|81579|phospholipase A2, group XIIA##AK075389|PLA2G12A|81579|phospholipase A2, group XIIA##AK313081|PLA2G12A|81579|phospholipase A2, group XIIA##NM_030821|PLA2G12A|81579|phospholipase A2, group XIIA##J02770|CFI|3426|complement factor I##AK290625|CFI|3426|complement factor I##BC005275|CFI|3426|complement factor I##Y00318|CFI|3426|complement factor I##BC020718|CFI|3426|complement factor I##AK299232|CFI|3426|complement factor I	0.0	
chr4	22436610	22436759	reg1035445.p1	4.613	+	NM_147182 TSC_hg19_v1_chr4_-_21950396	-486300	-	BX648990 DQ148490 NM_001035003	-737367	-	DQ148491 NM_001035004	-890406	-	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	80870	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	257908	+	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	1454969	-	NM_147182|KCNIP4|80333|Kv channel interacting protein 4##BX648990|KCNIP4|80333|Kv channel interacting protein 4##DQ148490|KCNIP4|80333|Kv channel interacting protein 4##NM_001035003|KCNIP4|80333|Kv channel interacting protein 4##DQ148491|KCNIP4|80333|Kv channel interacting protein 4##NM_001035004|KCNIP4|80333|Kv channel interacting protein 4##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha	0.196645	
chr8	136774578	136774686	reg1029014.p2	4.613	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-304431	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-304974	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1049358	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2734474	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	3151612	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3940650	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.0	
chr8	8254727	8254800	reg1029031.p2	4.613	+	AK122582 NM_001080826	-15541	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-78875	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-168621	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	304935	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	496175	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	605602	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.0	
chr9	89230514	89230607	reg1028307.p2	4.613	+	TSC_hg19_v1_chr9_-_88969326 AL832193 CR936608 AK055546 CR933644 AL832026 BX641077 CR933643 BC111003 NM_001185059 NM_001185074 NM_024617	-261187	-	AK308352 TSC_hg19_v1_chr9_-_88969321 BC032456	-261271	-	AB528754 AM393721 TSC_hg19_v1_chr9_-_88897454 BC053900 BC071621 AY015642 AL834356 AF284752 BC002675 AK055643 AK225937 AK309289 NM_030940	-333116	-	L13698 NM_002048	331543	-	AK127445 NM_001001709 BC132741 BC136791 HQ258059	533041	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	882026	+	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC053900|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC071621|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AY015642|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AL834356|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AF284752|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC002675|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK055643|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK225937|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##NM_030940|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##L13698|GAS1|2619|growth arrest-specific 1##NM_002048|GAS1|2619|growth arrest-specific 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1	0.878571	CTCF.p2:-17:0.879
chr16	58028805	58028930	reg1028273.p2	4.612	+	AY363222 AY363223 NM_199046 NM_199456 BC104458 BC104459	-18525	+	U58837 NM_001135639 NM_001297 U18945	-23852	-	TSC_hg19_v1_chr16_-_57836404 AK307846 BC001211 AK304132 NM_001130100 NM_005550	-192458	-	AB037809 NM_020807	4894	-	NM_001195302 NM_001204911 NM_024598 TSC_hg19_v1_chr16_+_58035304 AK023216	6424	+	TSC_hg19_v1_chr16_+_58035310 AK293220 AK298473 AK303121 BC010099 AK301494 BC004415 BC007774 BC006291 BC021554	6465	+	AY363222|TEPP|374739|testis, prostate and placenta expressed##AY363223|TEPP|374739|testis, prostate and placenta expressed##NM_199046|TEPP|374739|testis, prostate and placenta expressed##NM_199456|TEPP|374739|testis, prostate and placenta expressed##BC104458|TEPP|374739|testis, prostate and placenta expressed##BC104459|TEPP|374739|testis, prostate and placenta expressed##U58837|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001135639|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001297|CNGB1|1258|cyclic nucleotide gated channel beta 1##U18945|CNGB1|1258|cyclic nucleotide gated channel beta 1##AK307846|KIFC3|3801|kinesin family member C3##BC001211|KIFC3|3801|kinesin family member C3##AK304132|KIFC3|3801|kinesin family member C3##NM_001130100|KIFC3|3801|kinesin family member C3##NM_005550|KIFC3|3801|kinesin family member C3##AB037809|ZNF319|57567|zinc finger protein 319##NM_020807|ZNF319|57567|zinc finger protein 319##NM_001195302|C16orf57|79650|chromosome 16 open reading frame 57##NM_001204911|C16orf57|79650|chromosome 16 open reading frame 57##NM_024598|C16orf57|79650|chromosome 16 open reading frame 57##AK023216|C16orf57|79650|chromosome 16 open reading frame 57##AK293220|C16orf57|79650|chromosome 16 open reading frame 57##AK298473|C16orf57|79650|chromosome 16 open reading frame 57##AK303121|C16orf57|79650|chromosome 16 open reading frame 57##BC010099|C16orf57|79650|chromosome 16 open reading frame 57##AK301494|C16orf57|79650|chromosome 16 open reading frame 57##BC004415|C16orf57|79650|chromosome 16 open reading frame 57##BC007774|C16orf57|79650|chromosome 16 open reading frame 57##BC006291|C16orf57|79650|chromosome 16 open reading frame 57##BC021554|C16orf57|79650|chromosome 16 open reading frame 57	0.047101	
chr1	69065844	69065972	reg1034779.p1	4.612	+	TSC_hg19_v1_chr1_-_68962766 AK225735 BC003511 AB281187 AB281274 AK000361 AK299324 NM_001114120 NM_017779	-103127	-	CU688044 BC065304 BC011743 BC035506 BC041580 TSC_hg19_v1_chr1_-_68962723	-103207	-	AK289925 BC075035 BC075036 NM_000329 U18991	-150272	-	TSC_hg19_v1_chr1_+_70032819 BC080568	966930	+	AK294206 TSC_hg19_v1_chr1_+_70033988	968063	+	TSC_hg19_v1_chr1_+_70034033 AF498274	968172	+	AK225735|DEPDC1|55635|DEP domain containing 1##BC003511|DEPDC1|55635|DEP domain containing 1##AB281187|DEPDC1|55635|DEP domain containing 1##AB281274|DEPDC1|55635|DEP domain containing 1##AK000361|DEPDC1|55635|DEP domain containing 1##AK299324|DEPDC1|55635|DEP domain containing 1##NM_001114120|DEPDC1|55635|DEP domain containing 1##NM_017779|DEPDC1|55635|DEP domain containing 1##BC065304|DEPDC1|55635|DEP domain containing 1##BC011743|DEPDC1|55635|DEP domain containing 1##BC035506|DEPDC1|55635|DEP domain containing 1##BC041580|DEPDC1|55635|DEP domain containing 1##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##AF498274|LRRC7|57554|leucine rich repeat containing 7	0.300073	CTCF.p2:8:0.300
chr19	42388267	42388389	reg1023912.p1	4.612	+	TSC_hg19_v1_chr19_+_42387309 U64105	-1010	+	BC064996 TSC_hg19_v1_chr19_+_42387266 NM_004706 NM_198977 BC011726	-1051	+	NM_001783 NM_021601 AK223371 M80462 M86921 AK315337 BC113731 BC113733 S46706 HQ258131 M74721 S75217 S79248 X83540	-7047	+	NM_199002 TSC_hg19_v1_chr19_+_42388510 BC034013 BC067262	158	+	AF112996 BT019964 CR457214 CR542116 AB590878 AF112202 AJ133534 BC008950 TSC_hg19_v1_chr19_-_42463499	75140	-	TSC_hg19_v1_chr19_-_42463500 NM_006423	75192	-	U64105|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC064996|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_004706|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_198977|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC011726|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_001783|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##NM_021601|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##AK223371|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##M80462|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##M86921|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##AK315337|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##BC113731|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##BC113733|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##S46706|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##HQ258131|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##M74721|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##S75217|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##S79248|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##X83540|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##NM_199002|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC034013|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC067262|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##AF112996|RABAC1|10567|Rab acceptor 1 (prenylated)##BT019964|RABAC1|10567|Rab acceptor 1 (prenylated)##CR457214|RABAC1|10567|Rab acceptor 1 (prenylated)##CR542116|RABAC1|10567|Rab acceptor 1 (prenylated)##AF112202|RABAC1|10567|Rab acceptor 1 (prenylated)##AJ133534|RABAC1|10567|Rab acceptor 1 (prenylated)##BC008950|RABAC1|10567|Rab acceptor 1 (prenylated)##NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)	0.0	
chr2	165416846	165416980	reg1035621.p1	4.612	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	-824396	-	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-1721666	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-1721789	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	8091	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	60980	-	TSC_hg19_v1_chr2_-_165477987 AK307744 AK313153	61080	-	BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14##AK307744|GRB14|2888|growth factor receptor-bound protein 14##AK313153|GRB14|2888|growth factor receptor-bound protein 14	0.449024	CTCF.p2:-13:0.449
chr22	42336908	42337088	reg1001495.p1	4.612	+	EU035297 NM_001110215	-776	-	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	-14199	-	NM_001207020	-26328	-	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	6125	-	TSC_hg19_v1_chr22_+_42372810 NM_019106 NM_145733 AK290037 AK299919 AL833942 BC111779 CR456572 AF285107 AF285108 AF285109	35910	+	AK128138 NM_152613 TSC_hg19_v1_chr22_+_42394808 AK129656 AK296138 BC022546 BC022549 BC038789 AK310980 CR456400 AB463345 CU012958 CU013246	57777	+	EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_001207020|SHISA8|440829|shisa homolog 8 (Xenopus laevis)##CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M##NM_019106|SEPT3|55964|septin 3##NM_145733|SEPT3|55964|septin 3##AK290037|SEPT3|55964|septin 3##AK299919|SEPT3|55964|septin 3##AL833942|SEPT3|55964|septin 3##BC111779|SEPT3|55964|septin 3##CR456572|SEPT3|55964|septin 3##AF285107|SEPT3|55964|septin 3##AF285108|SEPT3|55964|septin 3##AF285109|SEPT3|55964|septin 3##AK128138|WBP2NL|164684|WBP2 N-terminal like##NM_152613|WBP2NL|164684|WBP2 N-terminal like##AK129656|WBP2NL|164684|WBP2 N-terminal like##AK296138|WBP2NL|164684|WBP2 N-terminal like##BC022546|WBP2NL|164684|WBP2 N-terminal like##BC022549|WBP2NL|164684|WBP2 N-terminal like##CR456400|WBP2NL|164684|WBP2 N-terminal like	0.0	
chr5	89431806	89431934	reg1027520.p1	4.612	+	AL833268 AL833274 NM_001131005 NM_001193347	-1231976	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1246606	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-1246750	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	273669	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	338312	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	338708	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.014263	
chr7	120969599	120969731	reg1025221.p1	4.612	+	AF169963 NM_057168	-576	+	AF152584 NM_016087	-4245	+	AK025639 AK225313 TSC_hg19_v1_chr7_+_120702920	-266792	+	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	66672	-	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	66749	-	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	543496	+	AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16##AK025639|C7orf58|79974|chromosome 7 open reading frame 58##AK225313|C7orf58|79974|chromosome 7 open reading frame 58##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C##AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1	0.139344	
chr7	158769624	158769783	reg1001160.p1	4.612	+	TSC_hg19_v1_chr7_+_158649248 BC014491 NM_018051 CU677023	-120390	+	TSC_hg19_v1_chr7_-_158622236 AB527334 AY368150 NM_020728	-147443	-	TSC_hg19_v1_chr7_-_158622198 AB033054	-147512	-	BT007118 DQ890571 DQ893732 BC010569 AK310386 L36566 U18810 AK308955 NM_003382 X95097	167852	-	None	None	None	None	None	None	BC014491|WDR60|55112|WD repeat domain 60##NM_018051|WDR60|55112|WD repeat domain 60##AY368150|ESYT2|57488|extended synaptotagmin-like protein 2##NM_020728|ESYT2|57488|extended synaptotagmin-like protein 2##AB033054|ESYT2|57488|extended synaptotagmin-like protein 2##BT007118|VIPR2|7434|vasoactive intestinal peptide receptor 2##DQ890571|VIPR2|7434|vasoactive intestinal peptide receptor 2##DQ893732|VIPR2|7434|vasoactive intestinal peptide receptor 2##BC010569|VIPR2|7434|vasoactive intestinal peptide receptor 2##AK310386|VIPR2|7434|vasoactive intestinal peptide receptor 2##L36566|VIPR2|7434|vasoactive intestinal peptide receptor 2##U18810|VIPR2|7434|vasoactive intestinal peptide receptor 2##AK308955|VIPR2|7434|vasoactive intestinal peptide receptor 2##NM_003382|VIPR2|7434|vasoactive intestinal peptide receptor 2##X95097|VIPR2|7434|vasoactive intestinal peptide receptor 2	0.0	
chr15	90721860	90721961	reg1026118.p1	4.611	+	TSC_hg19_v1_chr15_-_90645713 AK312627	-76183	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	-76205	-	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	-76248	-	TSC_hg19_v1_chr15_+_90728151 NM_020210 AK289991 AY358392	6286	+	TSC_hg19_v1_chr15_+_90744561 AY445887 NM_198925 AB051532 BC126438 BC144141 BC110853 AB385501 HQ258520 AK026108	22780	+	TSC_hg19_v1_chr15_-_90777138 AB451276 AB451406 AB463454 CR456955 DQ891196 DQ894379	55218	-	AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_020210|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK289991|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY358392|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY445887|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_198925|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB051532|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC126438|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC144141|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC110853|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##HQ258520|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK026108|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB451276|CIB1|10519|calcium and integrin binding 1 (calmyrin)##AB451406|CIB1|10519|calcium and integrin binding 1 (calmyrin)##CR456955|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ891196|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ894379|CIB1|10519|calcium and integrin binding 1 (calmyrin)	0.0	
chr20	62362249	62362418	reg1026141.p1	4.611	+	TSC_hg19_v1_chr20_+_62339419 NM_001195653 NM_001195654 NM_032527 NM_181485 AK074961 AK122912 AK314726 BC032612 BC019338 AK307368 AK027878	-22937	+	TSC_hg19_v1_chr20_-_62339374 BC010068 NM_001134758 NM_003224	-22987	-	TSC_hg19_v1_chr20_-_62339259 BC092480 BC021023 BC093967 BC143447 BC143448 BC143467 BC143472 BC143477	-23094	-	TSC_hg19_v1_chr20_+_62368015 NM_017806 AK000413	5649	+	TSC_hg19_v1_chr20_+_62368035 BC017016	5707	+	TSC_hg19_v1_chr20_+_62371128 BC052306 AB052777 NM_020062	8827	+	NM_001195653|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##NM_001195654|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##NM_032527|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##NM_181485|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##AK074961|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##AK314726|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##BC032612|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##BC019338|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##AK027878|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##NM_001134758|ARFRP1|10139|ADP-ribosylation factor related protein 1##NM_003224|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC092480|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC021023|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC093967|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143447|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143448|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143467|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143472|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143477|ARFRP1|10139|ADP-ribosylation factor related protein 1##NM_017806|LIME1|54923|Lck interacting transmembrane adaptor 1##AK000413|LIME1|54923|Lck interacting transmembrane adaptor 1##BC017016|LIME1|54923|Lck interacting transmembrane adaptor 1##BC052306|SLC2A4RG|56731|SLC2A4 regulator##AB052777|SLC2A4RG|56731|SLC2A4 regulator##NM_020062|SLC2A4RG|56731|SLC2A4 regulator	0.0	
chr4	7194109	7194225	reg1027241.p1	4.611	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-124366	-	AF298592 DQ891523 DQ894713 TSC_hg19_v1_chr4_-_7069792 AK098475 AK301695 AK312882 BC024242 NM_025196	-124390	-	TSC_hg19_v1_chr4_+_7045222 AK093974 AX748390 AB590997	-148903	+	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	228	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	242489	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	747221	-	AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AF298592|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ891523|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##DQ894713|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK098475|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK301695|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK312882|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##BC024242|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##NM_025196|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK093974|TADA2B|93624|transcriptional adaptor 2B##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1	1.106277	CTCF.p2:16:0.996
chr5	72892664	72892789	reg1026714.p1	4.611	+	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	-31144	+	BC012917 TSC_hg19_v1_chr5_-_72861465 AF251051 NM_023039	-31267	-	TSC_hg19_v1_chr5_-_72861256 AK022876	-31494	-	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	29259	+	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	216624	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	1043737	-	AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##BC012917|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AF251051|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##NM_023039|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AK022876|ANKRA2|57763|ankyrin repeat, family A (RFXANK-like), 2##AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)	0.411281	CTCF.p2:-22:0.411
chr5	86266939	86267038	reg1022891.p1	4.611	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	-353171	+	TSC_hg19_v1_chr5_+_85913757 AK026505	-353230	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-2586324	-	TSC_hg19_v1_chr5_+_86563706 CR749722	296697	+	TSC_hg19_v1_chr5_+_86563831 BC131816	296838	+	TSC_hg19_v1_chr5_+_86564085 AB209106 NM_002890 BC033015	297078	+	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.442587	CTCF.p2:-30:0.443
chr6	130054581	130054726	reg1038090.p1	4.611	+	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	-23327	-	NM_000426 NM_001079823 Z26653	-850340	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-1212997	-	NM_001010876	127762	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	285072	+	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	481802	-	BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3	0.496073	CTCF.p2:13:0.496
chr6	157097640	157097745	reg1030259.p1	4.611	+	AF190122 NM_015718	-1320656	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1462069	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1462107	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	1371	+	TSC_hg19_v1_chr6_+_157099206 AB587572	1533	+	TSC_hg19_v1_chr6_+_157099283 AF521671	1592	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.0	
chr8	47619931	47620038	reg1030584.p2	4.611	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	-4472379	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-4624337	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-4624351	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	553511	+	TSC_hg19_v1_chr8_+_48173521 AK303579	553535	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	553548	+	AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146	0.805933	CTCF.p2:2:0.806
chr11	9225608	9225707	reg1029827.p2	4.610	+	BC111690 AK131552 AK123039 NM_001170690 NM_020974 TSC_hg19_v1_chr11_-_9113185	-112519	-	BC008835 TSC_hg19_v1_chr11_-_9025549 AK024750 AK098694 AK296484 NM_020645	-200094	-	BC040124 TSC_hg19_v1_chr11_-_8986002	-239648	-	TSC_hg19_v1_chr11_-_9225783 AK302478	164	-	AB029014 TSC_hg19_v1_chr11_-_9286891 BC071596 NM_001243254 NM_015213	61205	-	AK303339 TSC_hg19_v1_chr11_-_9336043 BC064366 BC091524	110402	-	BC111690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK131552|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK123039|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_001170690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_020974|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##BC008835|NRIP3|56675|nuclear receptor interacting protein 3##AK024750|NRIP3|56675|nuclear receptor interacting protein 3##AK098694|NRIP3|56675|nuclear receptor interacting protein 3##AK296484|NRIP3|56675|nuclear receptor interacting protein 3##NM_020645|NRIP3|56675|nuclear receptor interacting protein 3##BC040124|TMEM9B|56674|TMEM9 domain family, member B##AK302478|DENND5A|23258|DENN/MADD domain containing 5A##AB029014|DENND5A|23258|DENN/MADD domain containing 5A##BC071596|DENND5A|23258|DENN/MADD domain containing 5A##NM_001243254|DENND5A|23258|DENN/MADD domain containing 5A##NM_015213|DENND5A|23258|DENN/MADD domain containing 5A##AK303339|TMEM41B|440026|transmembrane protein 41B##BC064366|TMEM41B|440026|transmembrane protein 41B##BC091524|TMEM41B|440026|transmembrane protein 41B	0.092718	
chr17	64422632	64422734	reg1029642.p1	4.610	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	-123756	+	TSC_hg19_v1_chr17_+_64298733 BC053321	-123933	+	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	-197158	-	AK290171 TSC_hg19_v1_chr17_+_64831234	408552	+	BC101633 NM_145811 BC101607 AF361351 AF458898	450737	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	538206	+	NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##BC053321|PRKCA|5578|protein kinase C, alpha##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	0.992027	CTCF.p2:0:0.992
chr22	21271430	21271550	reg1029388.p2	4.610	+	TSC_hg19_v1_chr22_+_21213366 CR456582 CU013181 CU013469 AB527222 BT007357	-58116	+	TSC_hg19_v1_chr22_+_21213294 NM_004782 AF115436 BC009715	-58193	+	AK131431 NM_058004 TSC_hg19_v1_chr22_-_21213100	-58361	-	TSC_hg19_v1_chr22_+_21271694 AK292909 NM_005207 X59656	179	+	BC026248 TSC_hg19_v1_chr22_+_21271721	231	+	TSC_hg19_v1_chr22_+_21271756 BC043500	341	+	CR456582|SNAP29|9342|synaptosomal-associated protein, 29kDa##CU013181|SNAP29|9342|synaptosomal-associated protein, 29kDa##CU013469|SNAP29|9342|synaptosomal-associated protein, 29kDa##BT007357|SNAP29|9342|synaptosomal-associated protein, 29kDa##NM_004782|SNAP29|9342|synaptosomal-associated protein, 29kDa##AF115436|SNAP29|9342|synaptosomal-associated protein, 29kDa##BC009715|SNAP29|9342|synaptosomal-associated protein, 29kDa##AK131431|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_058004|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##AK292909|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like##NM_005207|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like##X59656|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like##BC026248|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like##BC043500|CRKL|1399|v-crk sarcoma virus CT10 oncogene homolog (avian)-like	0.0	
chr3	61356796	61356952	reg1010589.p1	4.610	+	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	-119784	-	BC050317 TSC_hg19_v1_chr3_-_59035759	-2321114	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-2321133	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	190337	+	BC047734 TSC_hg19_v1_chr3_+_61547294	190412	+	L09247 AB385117 TSC_hg19_v1_chr3_+_61548071	191102	+	BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.0	
chr3	62318536	62318694	reg1031878.p1	4.610	+	BC017772 NM_020685	-13220	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	-13909	+	AB055764 TSC_hg19_v1_chr3_-_61728812	-589804	-	AK290464 NM_018008	40574	-	TSC_hg19_v1_chr3_-_62860565 AB587314	542017	-	AF458662 AB593079 TSC_hg19_v1_chr3_-_62861056 AB032947 NM_003716 NM_183393 NM_183394	542429	-	BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2##AF458662|CADPS|8618|Ca++-dependent secretion activator##AB593079|CADPS|8618|Ca++-dependent secretion activator##AB032947|CADPS|8618|Ca++-dependent secretion activator##NM_003716|CADPS|8618|Ca++-dependent secretion activator##NM_183393|CADPS|8618|Ca++-dependent secretion activator##NM_183394|CADPS|8618|Ca++-dependent secretion activator	0.691986	CTCF.p2:37:0.692
chr5	68320128	68320235	reg1027791.p2	4.610	+	AK094785 NM_001242466 AK294919	-731729	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-733635	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-735887	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	69622	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	69701	+	AK292925 TSC_hg19_v1_chr5_+_68389913	69732	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.922036	CTCF.p2:-6:0.922
chr7	112538685	112538849	reg1005242.p1	4.610	+	AK293311 TSC_hg19_v1_chr7_-_112430447 AK314460 AL136626 AK025482 NM_022484	-108324	-	NM_001134468 BC031976 AK096894 NM_182597	-417781	+	NM_001197079	-446655	+	AL834437 AK299901 TSC_hg19_v1_chr7_-_112579931 BC114615 AK056380 NM_152556	41063	-	AK297464 AK312587 NM_001146266 AL161959 NM_001146267 TSC_hg19_v1_chr7_-_112726667	187728	-	BC030577 TSC_hg19_v1_chr7_-_112727780	189013	-	AK293311|TMEM168|64418|transmembrane protein 168##AK314460|TMEM168|64418|transmembrane protein 168##AL136626|TMEM168|64418|transmembrane protein 168##AK025482|TMEM168|64418|transmembrane protein 168##NM_022484|TMEM168|64418|transmembrane protein 168##NM_001134468|C7orf53|286006|chromosome 7 open reading frame 53##BC031976|C7orf53|286006|chromosome 7 open reading frame 53##AK096894|C7orf53|286006|chromosome 7 open reading frame 53##NM_182597|C7orf53|286006|chromosome 7 open reading frame 53##NM_001197079|IFRD1|3475|interferon-related developmental regulator 1##AL834437|C7orf60|154743|chromosome 7 open reading frame 60##AK299901|C7orf60|154743|chromosome 7 open reading frame 60##BC114615|C7orf60|154743|chromosome 7 open reading frame 60##AK056380|C7orf60|154743|chromosome 7 open reading frame 60##NM_152556|C7orf60|154743|chromosome 7 open reading frame 60##AK297464|GPR85|54329|G protein-coupled receptor 85##AK312587|GPR85|54329|G protein-coupled receptor 85##NM_001146266|GPR85|54329|G protein-coupled receptor 85##AL161959|GPR85|54329|G protein-coupled receptor 85##NM_001146267|GPR85|54329|G protein-coupled receptor 85##BC030577|GPR85|54329|G protein-coupled receptor 85	0.19153	
chr14	93548770	93548837	reg1034600.p1	4.609	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-159206	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	-159359	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-288117	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	32788	-	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	33411	-	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	102397	-	AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1	0.0	
chr15	41988325	41988455	reg1032304.p1	4.609	+	TSC_hg19_v1_chr15_+_41952661 AK055203	-35738	+	TSC_hg19_v1_chr15_+_41952628 NM_001080541 NM_001164273	-35785	+	TSC_hg19_v1_chr15_+_41851415 NM_006293 D17517 BC051756 BC034960 BC049368 U05682 AB384948 CU690612 D50479	-137055	+	AB011090 TSC_hg19_v1_chr15_+_42052630	64213	+	BC036660 NM_001128608 NM_014994 TSC_hg19_v1_chr15_+_42066666 BX648786	78268	+	AK302482 TSC_hg19_v1_chr15_+_42066879 AL833267 AB011168 BC113983 BC114493 AK091616 AK292414	78448	+	AK055203|MGA|23269|MAX gene associated##NM_001080541|MGA|23269|MAX gene associated##NM_001164273|MGA|23269|MAX gene associated##NM_006293|TYRO3|7301|TYRO3 protein tyrosine kinase##D17517|TYRO3|7301|TYRO3 protein tyrosine kinase##BC051756|TYRO3|7301|TYRO3 protein tyrosine kinase##BC034960|TYRO3|7301|TYRO3 protein tyrosine kinase##BC049368|TYRO3|7301|TYRO3 protein tyrosine kinase##U05682|TYRO3|7301|TYRO3 protein tyrosine kinase##D50479|TYRO3|7301|TYRO3 protein tyrosine kinase##AB011090|MGA|23269|MAX gene associated##BC036660|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##NM_001128608|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##NM_014994|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BX648786|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK302482|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AL833267|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AB011168|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BC113983|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BC114493|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK091616|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK292414|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1	0.895238	CTCF.p2:13:0.895
chr19	39034954	39035135	reg1009627.p1	4.609	+	TSC_hg19_v1_chr19_+_38924330 NM_000540 NM_001042723 J05200	-110700	+	AF448437 BC146669 BC150202 BC142721 BC151216 TSC_hg19_v1_chr19_-_38916860 AX721071 AY048119 AY048120 AY048121 FJ768677 FJ768678 FJ768679 FJ768680 FJ768681 FJ768682 NM_001146202 NM_001146203 NM_001146204 NM_001146205 NM_001146206 NM_001146207 NM_170604	-118172	-	TSC_hg19_v1_chr19_+_38893839 BC080606 AK128745	-141143	+	AB527182 TSC_hg19_v1_chr19_-_39108593 NM_001042600 NM_007181	73544	-	TSC_hg19_v1_chr19_+_39109725 NM_013234 AF077051 AF085358 AB019392 AY245432	74669	+	TSC_hg19_v1_chr19_+_39109825 BC007559 AK298635	74772	+	NM_000540|RYR1|6261|ryanodine receptor 1 (skeletal)##NM_001042723|RYR1|6261|ryanodine receptor 1 (skeletal)##J05200|RYR1|6261|ryanodine receptor 1 (skeletal)##AF448437|RASGRP4|115727|RAS guanyl releasing protein 4##BC146669|RASGRP4|115727|RAS guanyl releasing protein 4##BC150202|RASGRP4|115727|RAS guanyl releasing protein 4##BC142721|RASGRP4|115727|RAS guanyl releasing protein 4##BC151216|RASGRP4|115727|RAS guanyl releasing protein 4##AY048119|RASGRP4|115727|RAS guanyl releasing protein 4##AY048120|RASGRP4|115727|RAS guanyl releasing protein 4##AY048121|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768677|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768678|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768679|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768680|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768681|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768682|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146202|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146203|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146204|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146205|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146206|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146207|RASGRP4|115727|RAS guanyl releasing protein 4##NM_170604|RASGRP4|115727|RAS guanyl releasing protein 4##BC080606|FAM98C|147965|family with sequence similarity 98, member C##AK128745|FAM98C|147965|family with sequence similarity 98, member C##NM_001042600|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_007181|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_013234|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF077051|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF085358|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AB019392|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AY245432|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##BC007559|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK298635|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K	0.014122	
chr2	168993039	168993149	reg1029102.p1	4.609	+	NM_020981	-317913	+	EF119711 EF119717 NM_001199144 NM_001199145	-949302	+	EF119718 EF119719 EF119720 EF119721 EF119722 NM_001079810 NM_001199143 NM_152381 AK097519	-1248098	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	110979	-	TSC_hg19_v1_chr2_+_169312764 AK172775	319665	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	319781	+	NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##EF119718|XIRP2|129446|xin actin-binding repeat containing 2##EF119719|XIRP2|129446|xin actin-binding repeat containing 2##EF119720|XIRP2|129446|xin actin-binding repeat containing 2##EF119721|XIRP2|129446|xin actin-binding repeat containing 2##EF119722|XIRP2|129446|xin actin-binding repeat containing 2##NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199143|XIRP2|129446|xin actin-binding repeat containing 2##NM_152381|XIRP2|129446|xin actin-binding repeat containing 2##AK097519|XIRP2|129446|xin actin-binding repeat containing 2##BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##AK172775|CERS6|253782|ceramide synthase 6##NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6	0.177548	
chr2	46063933	46064114	reg1017719.p2	4.609	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-184949	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-225616	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-268895	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	460568	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	460952	+	NM_001145051	642680	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.01576	
chr3	194947969	194948075	reg1029683.p1	4.609	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-540519	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-541399	+	NM_018385	-554817	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	43828	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	215680	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	322091	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.947712	CTCF.p2:-1:0.660	CTCF.p2:-4:0.287
chr5	131825895	131825975	reg1033882.p1	4.609	+	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-79307	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-120427	+	BX538252 TSC_hg19_v1_chr5_-_131705330	-120636	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	546	-	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	53257	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	66705	+	AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BX538252|LOC553103|553103|uncharacterized LOC553103##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)	0.096854	
chr8	143420449	143420584	reg1033930.p1	4.609	+	BC144560 AK125848 AK131461 NM_207414	-903199	-	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	-988455	+	TSC_hg19_v1_chr8_+_142402120 AK311257	-1018382	+	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	64021	-	AB005297 NM_001702	124860	+	AF193421 D87468 BC075802 BC012321 NM_015193 TSC_hg19_v1_chr8_-_143695839	275310	-	BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1##AF193421|ARC|23237|activity-regulated cytoskeleton-associated protein##D87468|ARC|23237|activity-regulated cytoskeleton-associated protein##BC075802|ARC|23237|activity-regulated cytoskeleton-associated protein##BC012321|ARC|23237|activity-regulated cytoskeleton-associated protein##NM_015193|ARC|23237|activity-regulated cytoskeleton-associated protein	0.0	
chrX	27638202	27638357	reg1026381.p1	4.609	+	AK097561 BC067286 NM_173523	-1427723	+	NM_173699 BC029525 AK057361	-1481793	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-2604206	-	BC157859 NM_001136533	126646	+	AK057527 NM_182506 BC101307 BC101309 BC101310	187836	+	AK128123 NM_001017930	361286	-	AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##NM_139058|ARX|170302|aristaless related homeobox##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	0.637767	CTCF.p2:-3:0.638
chr14	106598827	106598927	reg1021113.p2	4.608	+	GU552766 DQ454945 DQ454680 DQ454800 DQ100736 HQ392877 AY062313 JN110910 JN111168 L03821 L04324 FJ385334 FJ385335 HM774019 HM774079 HM774175 HM774429 HM774436 HM774460 HM774566 HM774691 HM774780 HM774984 AF165105 AY062308 DQ100831 AJ300807 AB063700 AY423173 AY062309 DQ100870 GU570344 HM994897 HM994907 HM994915 HM995019 HM995419 HM995424 HM995733 HM995761 HM995921 HM995935 HM995953 HM996087 HM996247 HM996409 DQ840731 DQ840896 AB374202 AM279603 AY866783 DQ431491 EF178033 FJ385392 GU570335 AB021538 AB063673 AB066975 AB067002 AB067017 AB067076 AB067261 AB363102 AB363150 AF062210 AF098364 AF174056 AF174100 AF174120 AF301484 AF455549 AF471257 AF471259 AF471261 AF471262 AF471264 AF471363 AF471478 AF471487 AF471497 AJ007956 AJ389180 AJ399809 AJ413989 AJ555276 AJ556639 AJ579273 AM040537 AY268370 AY466509 AY685302 AY685304 AY921574 AY921575 AY927662 AY941906 D83675 DQ065617 DQ065728 DQ535267 DQ535281 DQ535298 DQ535334 DQ535408 DQ535485 DQ926436 DQ926504 DQ926507 DQ926513 DQ926550 EF178020 GU570303 GU570338 GU570343 GU570348 L33984 S65535 Z33898 AY670714 HM995884 AF062141 L03683 L38431 X65894 X81740 M18515 BC053984 TSC_hg19_v1_chr14_-_106586668	-12376	-	DQ454787 U64487 AF460704 AF460740 AF460807 DQ454554 AL389978 FJ385400 DQ454728 DQ454993 DQ454902 GQ232943 GU552699 AY003824 AY003849 DQ454431 EF566904 AY003777 DQ454493 DQ454848 GU552714 GU552717 DQ454498 DQ454515 DQ454965 DQ523862 EF407823 DQ454754 DQ454849 DQ454990 FJ840311 FJ840313 FJ840317 FJ840329 FJ840349 FJ873842 FJ873857 FJ873909 FJ873912 FJ873925 FJ874051 FJ874081 FJ874083 FJ874089 HM116118 AY003786 EU433870 EF175391 EF175399 EF175431 EF175439 EF441746 EU433865 EU667604 EU099143 EU099237 EU099244 EU099063 EU099194 EU099113 EU099200 AM183985 AM183986 EU099292 HQ392870 AF103124 DQ100718 AF103028 AF103040 AF103322 HM774410 L07309 L07310 L07312 JN110741 L03824 L03825 L04325 HM774027 HM774097 HM774142 HM774318 HM774446 HM774453 HM774557 HM774576 HM774604 HM774628 HM774645 HM774671 HM774698 HM774809 HM774847 HM774858 HM775011 HM775058 AF165102 HM775038 HM775039 HM775042 AF082199 EU146392 EU146393 EU146395 AY376083 AY376084 AF103217 AY485363 DQ100667 DQ926397 DQ926487 AF062294 DQ187521 DQ187649 DQ523968 DQ523986 DQ524059 DQ926170 DQ926613 GU570296 GU570301 HM995316 HM995318 HM995367 HM995592 HM995658 HM995661 HM995663 HM995671 HM995696 HM995697 HM995699 HM995792 HM995793 HM995795 HM995911 HM995912 HM995913 HM995914 HM995915 HM995916 HM995917 HM995918 HM996161 HM996278 DQ187668 DQ322752 DQ322795 DQ322799 DQ322834 DQ322835 DQ322836 DQ322837 DQ322838 DQ322839 DQ322840 DQ322841 DQ322842 DQ322843 DQ322847 DQ322848 DQ322849 DQ322850 DQ322851 DQ322852 DQ322853 DQ322854 DQ322907 DQ322908 DQ322924 DQ322985 DQ322986 DQ322987 DQ840668 DQ840696 DQ840724 DQ840738 DQ840869 DQ840885 DQ840898 DQ840902 DQ926246 DQ926249 DQ926313 DQ926315 AB063717 AB063810 AB066882 AB066982 AB067264 AB067265 AB363130 AB363133 AB363178 AB363229 AB363239 AF234248 AJ306671 AY033239 AY033240 AY376073 AY376086 AY376088 AY422530 AY530313 AY640532 AY846271 AY971070 AY971132 AY986395 AY986402 DQ065641 DQ065715 DQ100950 DQ926227 DQ926469 DQ926491 DQ926596 EF178046 EU549734 FJ195526 GU570302 HQ378386 Z46761 AB021522 AB063668 AB363134 AB363177 AB363231 AF021996 AF035794 AF115122 AF119800 AF119801 AF119802 AF119803 AF119804 AF151704 AF174095 AF471243 AF471244 AF471245 AF471248 AF471251 AF471252 AF471253 AJ389186 AJ414018 AJ555260 AJ579155 AJ579190 AJ579223 AJ579232 AJ579237 AJ627246 AY530315 AY685254 AY971117 DQ065650 DQ100894 DQ100911 DQ205140 DQ205152 DQ212511 DQ431495 DQ535391 DQ535412 DQ535423 DQ535428 DQ840729 DQ840811 DQ926123 DQ926333 DQ926625 EF178050 EF633766 EF633767 EF633768 EF633798 FJ492898 GU570300 GU570349 S77136 U64493 U64507 U85230 U96395 X62972 X63081 X64241 X99352 X99366 Z96969 Z96970 Z97036 HM995655 HM995787 HM995788 HM995789 HM995870 L33033 X67907 AY392930 AY393153 AY393157 AY393162 L08089 AF062269 L06912 S72664 X65897 X81736 X81744 X81754 Z11959 BC090940 X61013 X61014 BC073758 AK097320 AK125582 AK130539 AK130586 AK130844 AK301403 TSC_hg19_v1_chr14_-_106573761	-25322	-	AF028100 AF460781 AF460830 DQ523918 DQ454686 DQ454784 AY003751 GQ232926 GQ232842 DQ454536 DQ454572 DQ454577 DQ523874 GU552698 DQ100996 AY003834 AY003866 DQ454881 DQ454918 GQ232935 GU552747 AY003780 DQ454841 DQ523891 FJ694882 FJ839966 FJ839976 FJ839978 FJ839985 FJ839992 FJ840024 FJ840027 FJ840030 FJ840039 FJ840068 FJ840074 FJ840076 FJ840077 FJ840081 FJ840084 FJ840087 FJ840121 FJ840122 FJ840152 FJ840211 FJ840345 FJ840372 FJ840374 FJ840382 FJ840393 FJ873873 FJ873898 FJ873903 FJ873918 FJ873976 FJ873981 FJ874020 FJ874039 FJ874070 AJ008190 AY003813 AY003814 EF175404 EF091903 EF091904 EF175384 EU350416 EU350417 AF035027 EU099275 EU099133 AM183981 AM183982 AM183983 HQ704031 HM774241 L04343 U63211 AF103184 FJ385385 HM774328 HM774349 HM774514 HM774642 HM774682 HM774840 HM774998 HQ704030 HQ704032 HQ704033 HQ704034 AF032360 HM774930 S56184 L03385 Y15773 AJ306670 AY376085 DQ926534 HM994910 HM995374 HM995381 AB063655 AB063669 AB063676 AB063796 AB063804 AB063927 AB066885 AB066886 AB066890 AB066980 AB066983 AB067006 AB067010 AB067016 AB067028 AB067069 AB067083 AB067103 AB067234 AB067266 AB363180 AF174058 AF174062 AJ306669 AJ309318 AM279602 AY376074 AY376080 AY944687 DQ100830 DQ100852 DQ100869 DQ100889 DQ100935 DQ926042 DQ926211 DQ926238 DQ926293 DQ926337 DQ926445 DQ926545 DQ926589 DQ926594 DQ926641 EF177963 EF177965 EU117415 FJ385303 FJ385304 FJ385360 FJ490203 GU570287 GU570291 GU570293 GU570294 HM994902 HM994970 HM994971 HM994973 HM994974 HM994975 HM994976 HM994999 HM995000 HM995001 HM995002 HM995003 HM995005 HM995006 HM995007 HM995008 HM995009 HM995010 HM995011 HM995229 HM995234 HM995240 HM995300 HM995301 HM995302 HM995303 HM995305 HM995350 HM995352 HM995354 HM995372 HM995378 HM995379 HM995382 HM995383 HM995384 HM995385 HM995386 HM995423 HM995430 HM995431 HM995449 HM995453 HM995454 HM995455 HM995458 HM995459 HM995507 HM995509 HM995510 HM995511 HM995575 HM995632 HM995835 HM995836 HM995838 HM995839 HM995840 HM995841 HM995954 HM996284 HM996494 HQ378378 U07985 Z18834 X98899 AB021529 AB021539 AF035796 AF471223 AF471224 AF471226 AF471227 AF471231 AF471235 AF471238 AF471239 AJ239353 AJ245321 AJ579149 AJ579153 AJ579156 AJ579215 AJ579229 AJ617571 AY379733 AY941939 D83676 D83677 DQ225095 DQ535264 DQ535301 DQ535363 DQ535409 DQ535438 DQ535483 EF633755 EF633756 EF633757 EF633758 EF633787 EF633789 EF633790 EF633816 EU835550 EU835551 GU570285 GU570286 HM152494 U00488 U00506 U00546 U00577 U00588 X62968 X62969 X63080 X64239 X73605 X79166 X99360 Z18318 Z33899 Z33901 Z14176 Z14171 AY994080 EU883655 DQ234395 DQ234396 DQ234397 DQ234398 DQ234399 DQ234401 EU883644 EU883645 EU883646 EU883647 EU883648 EU883649 EU883650 EU883651 EU883652 EU883653 EU883654 EU883656 EU883657 EU883658 EU883659 L23565 X53613 Z80840 CU675389 CU676902 BC021276 BC006402 TSC_hg19_v1_chr14_-_106552810 AK097367 AK123546 AK128565 AK128625 AK129508 BX640627	-46316	-	AF028103 AF028108 Z11951 FJ840130 AF460713 AF460734 DQ454527 DQ454388 DQ454699 GQ232866 DQ454529 GQ232862 GQ232892 GU552777 EF407836 AY003841 DQ454714 GU552715 GU552744 DQ454664 DQ454668 DQ454679 DQ454889 DQ523850 AF209741 FJ385398 FJ873853 GU552716 GU552740 FJ840399 FJ840405 FJ873982 FJ840136 FJ840137 FJ840146 FJ873844 FJ873859 FJ873968 AJ008185 AJ008243 DQ454505 AY003713 AY003823 AY003842 EU433861 AF103214 EF441758 AF209733 AF209739 M18511 EU099088 EU099091 EU099108 EU099125 EU099214 DQ100874 AF103360 AF103031 AF103055 AF103172 AF103027 AY062317 HM773987 JN110484 JN110743 JN110870 JN110880 JN110904 JN111065 FJ385409 FJ385427 GQ504866 HM774017 HM774087 HM774308 HM774638 HM774746 HM774912 HM774921 AF032354 AF103227 AF103255 AF082194 EU146316 EU146375 EU146379 EU146381 EU146388 EU146390 EU146391 AJ271553 AJ300806 DQ926562 L38566 AB066857 HM995144 AF035789 AF035799 AF035798 L26034 AF062296 AF062303 AF471268 DQ454900 DQ524054 HM995097 HM995098 HM995245 HM995265 HM995270 HM995272 HM995274 HM995569 HM995686 HM995688 HM995689 HM995690 HM995691 HM995692 HM995930 HM995937 HM995946 HM996125 HM996208 HM996383 HM996458 DQ322777 DQ840774 DQ840820 DQ840842 DQ840897 AJ278771 AY686927 AY866567 AY998725 DQ100923 DQ100931 DQ926186 DQ926328 DQ926496 EF178079 FJ195531 FJ195532 FJ385300 FJ385301 FJ385374 FJ385399 HM995143 L39128 X79165 AB021509 AB021517 AB021528 AB021540 AB063657 AB063800 AB063845 AB066984 AB067025 AB067128 AB363162 AB363202 AB363206 AB373605 AB373606 AB373610 AB373616 AB373630 AB373634 AF021972 AF035026 AF174091 AF471269 AF471270 AF471271 AF471274 AF471276 AF471277 AF471278 AF471279 AJ249632 AJ401163 AJ401164 AJ556720 AJ579094 AJ579101 AJ579115 AJ579140 AJ579160 AJ579180 AJ579219 AJ579227 AJ579235 AJ579263 AJ579275 AJ579285 AJ627238 AY055479 AY376081 AY971142 D83688 D83689 DQ065634 DQ535287 DQ535290 DQ535292 DQ535322 DQ535337 DQ535365 DQ535372 DQ535396 DQ535403 DQ535404 DQ926160 DQ926428 DQ926446 DQ926474 DQ926484 DQ926537 DQ926556 EF028218 EF178024 FJ195520 FJ195538 FJ385323 GU570304 HM152485 HQ689757 U97245 X62954 X62960 X87453 X99364 Y12699 Z18319 Z18322 Z18323 Z75557 Z98737 Z98738 Z98739 Z98740 AJ401161 M34023 L14818 X56523 X56524 AF431053 AF431055 Z14169 AY505570 X81723 X81743 Z14216 Z80843 L29153 L29154 Z14960 M34032 BC065820 BC014667 TSC_hg19_v1_chr14_-_106610847 AK123981 AK301228 AK130434 AK289373	11718	-	U32483 U32956 AF028093 AF028101 AF028111 FN562934 FN562935 FN562936 FN562938 FN562940 FN562941 FN562942 FN562943 FN562969 FN562970 FN562971 FN562972 FN562973 FN562974 FN562976 FN562977 FN562978 FN562979 FN562980 FN562981 FN562982 FN562983 FN564030 AY393108 GU552686 DQ926435 GU552684 GU552688 GU552757 GU552781 GU552690 AY003829 DQ454593 DQ454964 GU552735 FJ839984 FJ873855 FJ873870 FJ873978 FJ874013 HM116198 HM116220 AY003773 AY466515 EF091911 EF175403 EU667600 GQ232801 GQ232810 GQ232870 GQ232884 GQ232937 GQ232940 GU358677 DQ454763 L33029 AB063742 AB063753 AF209885 AJ007326 AY998724 EU099272 AF343408 AM279479 AM279486 AM279587 AM279589 AF103137 AF103300 AF103139 AY640542 HM774290 HM774693 HQ704036 JN111131 JN111139 JN111144 JN111184 JN111186 JN111187 JN111191 JN111197 JN111211 GQ504857 GQ504898 HM774123 HM774196 HM774674 JN110995 AY515008 HM774096 HM774295 HM774432 HM774654 HM774929 JN110663 JN110917 JN110945 JN110948 JN111032 JN111172 L04345 EF177943 FJ385330 FJ385333 FJ385428 HM774077 HM774081 HM774160 HM774325 HM774354 HM774361 HM774528 HM774594 HM774651 HM774665 HM774673 HM774683 HM774694 HM774869 HM774922 HQ704035 AF103230 AF103158 AF103095 AF103101 AF103237 AF103326 DQ926493 DQ097894 DQ097898 EF624133 EF624134 EF624137 EF624139 EU099193 EU146334 EU146384 AF103118 FJ385354 AY393014 EU099058 EU099190 HM995112 AY393019 L12067 L12070 AY393221 AY393225 AY393230 AY393244 AY393245 AY393246 AY393253 AY393261 AY393265 AY393272 AY393339 AY393362 AY393364 AY393494 AY393498 AY393507 AY393512 AY393521 AY393526 AY393527 AY393537 AY393658 AY393663 AY393681 EF177942 EF178122 AY640486 AF022009 AF062293 AF062306 AY685298 AY866751 AY941910 AY941960 DQ100669 DQ100695 DQ100823 DQ101000 DQ523958 GU570214 GU570234 GU570240 GU570244 HM994961 HM995031 HM995113 HM995115 HM995117 HM995118 HM995409 HM995411 HM995412 HM995413 HM995414 HM995415 HM995428 HM995461 HM995728 HM996035 HM996132 HM996228 HM996503 HM996531 HM996549 HQ378367 U64480 AB066989 AB067026 AB363145 AB363159 AY033251 AY033263 AY033264 AY941851 AY941917 DQ065675 DQ065679 DQ065695 DQ926155 DQ926171 DQ926203 DQ926402 DQ926411 DQ926472 DQ926480 DQ926481 DQ926483 DQ926540 DQ926542 DQ926549 EF177954 EF178002 EF178074 EF178082 EU794408 EU794435 FJ195464 FJ195469 FJ195474 FJ385305 FJ385319 FJ385363 FJ385390 FM160411 HQ378352 Z92891 AB063681 AB063682 AB063683 AB063684 AB063688 AB063689 AB063692 AB063693 AB063694 AB063695 AB063696 AB063702 AB063710 AB063718 AB063722 AB063725 AB063737 AB063738 AB063739 AB063746 AB063748 AB063786 AB063788 AB063795 AB063814 AB063816 AB063817 AB063819 AB063820 AB063821 AB063823 AB063825 AB063870 AB063904 AB063923 AB066999 AB067155 AB067156 AB067160 AB067163 AB067165 AB067171 AB067179 AB067302 AB067303 AB067332 AB067397 AF021967 AF021968 AF062199 AF062246 AF115131 AF115132 AF115133 AF115134 AF174092 AF174102 AF174123 AJ239345 AJ293739 AJ293740 AJ413994 AJ414022 AY530314 AY530319 AY971114 DQ065688 DQ100806 DQ926283 DQ926285 DQ926517 GU570230 GU570235 GU570236 GU570237 GU570238 GU570242 HM995881 HQ689758 JN158093 U00500 U00503 U00542 U00589 U64484 U77375 X61647 X91804 Z18832 Z18851 Z46855 DQ535265 DQ535277 DQ535295 DQ535369 DQ535473 EF177949 EF178045 EF178047 EF178059 EF178069 HM995648 HM995649 HM995876 AF026930 AF062147 AF062150 AF062212 AF062265 AF174028 L38435 M28136 X15611 X60504 Z14963 BC073789 BC051319 BC051328 TSC_hg19_v1_chr14_-_106642052 AK301327 AK301389 BC005951 BX640625 BX640626	42943	-	AY885219 X61021 Z14181 S55735 AY003795 DQ454455 DQ454409 AF460804 AF460662 AF460801 DQ454397 DQ100714 DQ523908 GQ232944 GQ232956 GQ232797 DQ840786 GQ232980 DQ454544 AY003853 DQ454479 DQ454535 DQ454792 DQ454854 DQ523849 DQ523895 GQ232770 GQ232955 DQ454396 DQ454585 DQ454631 DQ454654 DQ454956 DQ523905 GQ232836 AY003731 AY003716 AY003784 DQ454389 DQ454410 DQ454413 DQ454468 DQ454520 DQ454542 DQ454636 DQ454958 DQ454970 DQ523897 GQ232858 DQ454415 DQ454603 DQ454652 DQ454660 DQ454905 DQ454967 DQ454973 DQ523880 FJ694878 GQ232876 EF407825 EF407842 FJ840131 Z11947 FJ840333 FJ840335 FJ873821 FJ873823 FJ873828 FJ873833 FJ873836 FJ873860 FJ873862 FJ873874 FJ873877 FJ873883 FJ873914 FJ873942 FJ873962 FJ873970 FJ873987 FJ873990 FJ873992 FJ874005 FJ874027 FJ874036 FJ874038 FJ874063 FJ874086 AJ008226 DQ001066 AJ487489 EF091900 EF091901 EF091902 EF175385 EF407838 EF407845 EU814964 FJ694872 JF810262 JF810268 AY393066 AF209735 EU099104 EU099065 EU099101 EU099149 EU099151 EU099184 HM774293 EU099140 EU099070 EU099084 AF158380 EU099130 EU099206 EU099239 EU099243 EU099258 DQ118258 EU090051 DQ524167 EU099262 AF343414 DQ097900 EF555587 EU619977 AF103077 AF103170 AM279610 HM774182 U63212 HM995125 AF035793 AF103329 AF103330 AF103112 AF103182 AJ239379 EF555588 TSC_hg19_v1_chr14_-_106691939 HM774712 HM774761 JN110464 JN110738 JN110826 JN110827 JN110839 JN110903 JN110961 JN110967 JN111019 JN111020 JN111030 JN111035 JN111063 JN111100 JN111115 JN111156 L04329 GQ504855 GQ504939 GQ504944 GQ504967 HM774165 HM774369 HM774525 HM774602 HM774676 HM774690 HM774752 HM774770 HM774773 HM774906 HM775035 HM775044 HQ703986 HQ703987 HQ703995 HQ704026 L26905 L33025 AF103232 JN110697 AF032350 AF032352 AF103105 AJ239387 HM774240 Y14934 Y14935 Y14942 AF103145 EF624220 EU146314 EU146319 EU146378 AB266092 HM996466 DQ100899 AY423192 EF633794 EF633821 HM996470 HM996128 HM995111 AB027443 AF471507 DQ100917 DQ431609 U00572 DQ100693 DQ100840 DQ187606 DQ431612 DQ431613 DQ454842 DQ523995 DQ523997 DQ524047 DQ524062 EF633795 EF633796 HM995012 HM995014 HM995015 HM995084 HM995085 HM995086 HM995089 HM995091 HM995099 HM995100 HM995101 HM995102 HM995103 HM995104 HM995105 HM995106 HM995107 HM995108 HM995109 HM995110 HM995146 HM995147 HM995181 HM995188 HM995201 HM995278 HM995279 HM995280 HM995282 HM995284 HM995285 HM995292 HM995392 HM995530 HM995634 HM995888 HM995892 HM996033 HM996054 HM996072 HM996116 HM996119 HM996127 HM996149 HM996152 HM996173 HM996175 HM996181 HM996217 HM996257 HM996264 HM996267 HM996277 HM996341 HM996536 HM996544 DQ187628 DQ322746 DQ322747 DQ322768 DQ323029 DQ323030 DQ840720 DQ840783 DQ840784 DQ840785 DQ840787 DQ840788 DQ840789 DQ840790 DQ840792 DQ840793 DQ840794 DQ840795 DQ840796 DQ840797 DQ840817 DQ840822 DQ840837 AB453230 AJ245260 AY781807 AY866546 AY866968 AY941949 DQ005279 DQ100697 DQ100798 DQ100815 DQ100893 DQ100898 DQ100901 DQ100925 DQ100947 DQ926257 DQ926305 DQ926590 HQ378339 L19904 U21270 AB063691 AB063759 AB063908 AB066881 AB066972 AB066974 AB066976 AB066979 AB067033 AB363081 AB453231 AF044445 AF052523 AF062162 AF408719 AF455550 AF460967 AF471211 AJ001171 AJ243108 AJ271554 AJ389178 AJ389193 AJ519292 AJ555251 AJ555252 AY033254 AY033285 AY055481 AY466506 AY553643 AY553648 AY577302 AY685252 AY685253 AY846272 AY866763 AY866786 D83686 DQ005290 DQ065626 DQ065630 DQ065668 DQ065694 DQ065704 DQ212512 DQ431611 DQ535452 DQ840743 DQ840747 DQ840748 DQ840749 DQ840750 DQ840751 DQ840752 DQ840812 DQ926167 EF177948 EF177958 EF177959 EF633763 EF633764 EF633797 FJ039786 FJ039789 FJ385383 FJ481087 FJ492943 GU570307 HM152488 HM152500 HM152517 HM152520 HQ689728 S73912 U00508 U06787 U64497 U77372 X99354 Z18317 Z18324 L26898 AJ519295 HM995778 HM995962 AJ519313 HM995777 HM995779 HM995832 HM995882 HM995893 HM995902 HM995903 HM995904 HM995905	92961	-	BC053984|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AL389978|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BC090940|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073758|IGHM|3507|immunoglobulin heavy constant mu##AK097320|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125582|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130539|IGHM|3507|immunoglobulin heavy constant mu##AK130586|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130844|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301403|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC021276|IGHD|3495|immunoglobulin heavy constant delta##BC006402|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097367|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123546|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128565|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128625|IGHD|3495|immunoglobulin heavy constant delta##AK129508|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640627|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC065820|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC014667|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130434|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073789|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC051328|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK301327|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK301389|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC005951|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640625|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##BX640626|IGHA1|3493|immunoglobulin heavy constant alpha 1	2.968243	CTCF.p2:24:0.965	CTCF.p2:-33:0.991	CTCF.p2:-79:0.999
chr17	2286170	2286350	reg1000236.p2	4.608	+	TSC_hg19_v1_chr17_+_2240796 NM_014853 AB007857 NM_001098509 BC039204 AK294955 AB275762 AB385325 AB449878 AK304263	-45358	+	NM_018128 AB037822	-45522	-	AB463326 TSC_hg19_v1_chr17_-_2239749 AK026565	-46516	-	X96401 NM_020310 TSC_hg19_v1_chr17_-_2304355 AK291596	18056	-	TSC_hg19_v1_chr17_-_2415189 BX647255 AK294547 BC050603 BC001213 AL832612 AK027410 AK296464 NM_024086	128885	-	TSC_hg19_v1_chr17_+_2496944 NM_000430 L13386	210710	+	NM_014853|SGSM2|9905|small G protein signaling modulator 2##AB007857|SGSM2|9905|small G protein signaling modulator 2##NM_001098509|SGSM2|9905|small G protein signaling modulator 2##BC039204|SGSM2|9905|small G protein signaling modulator 2##AK294955|SGSM2|9905|small G protein signaling modulator 2##AB275762|SGSM2|9905|small G protein signaling modulator 2##AB449878|SGSM2|9905|small G protein signaling modulator 2##AK304263|SGSM2|9905|small G protein signaling modulator 2##NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AK026565|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##X96401|MNT|4335|MAX binding protein##NM_020310|MNT|4335|MAX binding protein##AK291596|MNT|4335|MAX binding protein##BX647255|METTL16|79066|methyltransferase like 16##AK294547|METTL16|79066|methyltransferase like 16##BC050603|METTL16|79066|methyltransferase like 16##BC001213|METTL16|79066|methyltransferase like 16##AL832612|METTL16|79066|methyltransferase like 16##AK027410|METTL16|79066|methyltransferase like 16##AK296464|METTL16|79066|methyltransferase like 16##NM_024086|METTL16|79066|methyltransferase like 16##NM_000430|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13386|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	0.0	
chr6	24283313	24283444	reg1018882.p1	4.608	+	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	-156948	+	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	-1713653	+	X54394 X54393 GQ305133 M58594 NM_001163558	-1980331	-	AF181722 NM_181337	73752	+	AF181721 NM_016356	74901	-	BC050704 NM_001195610	100141	-	AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1##AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2##BC050704|DCDC2|51473|doublecortin domain containing 2##NM_001195610|DCDC2|51473|doublecortin domain containing 2	0.158732	
chr7	92509653	92509760	reg1025306.p1	4.608	+	TSC_hg19_v1_chr7_-_92465935 NM_001145306	-43772	-	AK313491 TSC_hg19_v1_chr7_-_92465884	-43808	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	-46486	-	AB095925 BC150249 AK122951 TSC_hg19_v1_chr7_-_92747292 BX647072 AF453311	237577	-	TSC_hg19_v1_chr7_-_92747328 BC065769 AF445355 NM_001193307 NM_017654	237620	-	AF474973 AY195582 AY195583 AY195584 AY195585 AY195586 AY195587 DQ068177 TSC_hg19_v1_chr7_-_92777683 AB095926 NM_152703	267964	-	NM_001145306|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AB095925|SAMD9|54809|sterile alpha motif domain containing 9##BC150249|SAMD9|54809|sterile alpha motif domain containing 9##AK122951|SAMD9|54809|sterile alpha motif domain containing 9##BX647072|SAMD9|54809|sterile alpha motif domain containing 9##AF453311|SAMD9|54809|sterile alpha motif domain containing 9##BC065769|SAMD9|54809|sterile alpha motif domain containing 9##AF445355|SAMD9|54809|sterile alpha motif domain containing 9##NM_001193307|SAMD9|54809|sterile alpha motif domain containing 9##NM_017654|SAMD9|54809|sterile alpha motif domain containing 9##AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like##DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like##AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like##NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like	0.955582	CTCF.p2:2:0.956
chr10	112602728	112602908	reg1020940.p3	4.607	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-198689	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-258703	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-275326	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	28794	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	28896	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	75878	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.0	
chr16	29465197	29465296	reg1028609.p1	4.607	+	TSC_hg19_v1_chr16_+_29086310 BC042920 AK225670 AK298442 AK301253	-378941	+	AK307342 NM_001014987 NM_001014988 NM_014387 TSC_hg19_v1_chr16_+_28996403 AJ223280	-468848	+	BC011563 NM_001014989	-469100	+	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	605	+	BC022832 NM_001031827 NM_001039182	1038	-	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	5980	+	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK307342|LAT|27040|linker for activation of T cells##NM_001014987|LAT|27040|linker for activation of T cells##NM_001014988|LAT|27040|linker for activation of T cells##NM_014387|LAT|27040|linker for activation of T cells##AJ223280|LAT|27040|linker for activation of T cells##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3	0.0	
chr3	114303941	114304052	reg1028802.p1	4.607	+	AF139460 NM_001164342	-201508	-	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	-291143	+	NM_007136 X65233	-347572	-	BC029041 NM_001164347	39056	-	AK315307 NM_001164346 TSC_hg19_v1_chr3_-_114343793	39798	-	AK225788 NM_001164344 NM_001164345	174124	-	AF139460|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164342|ZBTB20|26137|zinc finger and BTB domain containing 20##EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20##AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20	0.298195	CTCF.p2:38:0.298
chr3	57568666	57568824	reg1034337.p1	4.607	+	TSC_hg19_v1_chr3_+_57542054 EU832509 EU832590 EU832450	-26614	+	TSC_hg19_v1_chr3_+_57542013 NM_177966 AK300374 BC034978 BX647169 AK074423 AB115695	-26733	+	AK126276 NM_178504 NM_198564	-38677	-	AF493883 DQ894082 EU176202 AB463400 M36341 U91920 BC003364 TSC_hg19_v1_chr3_-_57583072 AK313008	14225	-	TSC_hg19_v1_chr3_-_57583086 BC008753	14338	-	BC022866 TSC_hg19_v1_chr3_-_57583106 BC016325	14374	-	EU832509|PDE12|201626|phosphodiesterase 12##EU832590|PDE12|201626|phosphodiesterase 12##EU832450|PDE12|201626|phosphodiesterase 12##NM_177966|PDE12|201626|phosphodiesterase 12##AK300374|PDE12|201626|phosphodiesterase 12##BC034978|PDE12|201626|phosphodiesterase 12##BX647169|PDE12|201626|phosphodiesterase 12##AK074423|PDE12|201626|phosphodiesterase 12##AB115695|PDE12|201626|phosphodiesterase 12##AK126276|DNAH12|201625|dynein, axonemal, heavy chain 12##NM_178504|DNAH12|201625|dynein, axonemal, heavy chain 12##NM_198564|DNAH12|201625|dynein, axonemal, heavy chain 12##AF493883|ARF4|378|ADP-ribosylation factor 4##DQ894082|ARF4|378|ADP-ribosylation factor 4##EU176202|ARF4|378|ADP-ribosylation factor 4##M36341|ARF4|378|ADP-ribosylation factor 4##U91920|ARF4|378|ADP-ribosylation factor 4##BC003364|ARF4|378|ADP-ribosylation factor 4##AK313008|ARF4|378|ADP-ribosylation factor 4##BC008753|ARF4|378|ADP-ribosylation factor 4##BC022866|ARF4|378|ADP-ribosylation factor 4##BC016325|ARF4|378|ADP-ribosylation factor 4	0.987526	CTCF.p2:-2:0.988
chr7	112212347	112212499	reg1031284.p1	4.607	+	NM_001134468 BC031976 AK096894 NM_182597	-91437	+	NM_001197079	-120311	+	TSC_hg19_v1_chr7_+_112090514 NM_001550 AK225222 BC001272 Y10313 AK297509 AB527574 BT019889 BT019890 CU674634	-121820	+	AK293311 TSC_hg19_v1_chr7_-_112430447 AK314460 AL136626 AK025482 NM_022484	218020	-	AL834437 AK299901 TSC_hg19_v1_chr7_-_112579931 BC114615 AK056380 NM_152556	367407	-	AK297464 AK312587 NM_001146266 AL161959 NM_001146267 TSC_hg19_v1_chr7_-_112726667	514072	-	NM_001134468|C7orf53|286006|chromosome 7 open reading frame 53##BC031976|C7orf53|286006|chromosome 7 open reading frame 53##AK096894|C7orf53|286006|chromosome 7 open reading frame 53##NM_182597|C7orf53|286006|chromosome 7 open reading frame 53##NM_001197079|IFRD1|3475|interferon-related developmental regulator 1##NM_001550|IFRD1|3475|interferon-related developmental regulator 1##AK225222|IFRD1|3475|interferon-related developmental regulator 1##BC001272|IFRD1|3475|interferon-related developmental regulator 1##AK297509|IFRD1|3475|interferon-related developmental regulator 1##BT019889|IFRD1|3475|interferon-related developmental regulator 1##BT019890|IFRD1|3475|interferon-related developmental regulator 1##AK293311|TMEM168|64418|transmembrane protein 168##AK314460|TMEM168|64418|transmembrane protein 168##AL136626|TMEM168|64418|transmembrane protein 168##AK025482|TMEM168|64418|transmembrane protein 168##NM_022484|TMEM168|64418|transmembrane protein 168##AL834437|C7orf60|154743|chromosome 7 open reading frame 60##AK299901|C7orf60|154743|chromosome 7 open reading frame 60##BC114615|C7orf60|154743|chromosome 7 open reading frame 60##AK056380|C7orf60|154743|chromosome 7 open reading frame 60##NM_152556|C7orf60|154743|chromosome 7 open reading frame 60##AK297464|GPR85|54329|G protein-coupled receptor 85##AK312587|GPR85|54329|G protein-coupled receptor 85##NM_001146266|GPR85|54329|G protein-coupled receptor 85##AL161959|GPR85|54329|G protein-coupled receptor 85##NM_001146267|GPR85|54329|G protein-coupled receptor 85	0.042051	
chrX	48332625	48332719	reg1031741.p2	4.607	+	TSC_hg19_v1_chrX_-_48328624 NM_033518	-4050	-	AF276889 TSC_hg19_v1_chrX_-_48328573	-4100	-	TSC_hg19_v1_chrX_-_48327781 BC019246 AK094788	-4836	-	TSC_hg19_v1_chrX_+_48334590 AK024023 NM_012280 NM_177439 AJ005892 AK297486 AK315138 BC021047 BC023584	1875	+	AF063015 NM_177434 AB590908 CU692806	3735	+	TSC_hg19_v1_chrX_+_48367379 NM_022825 NM_203473 AK293347 AK056340 BC019080 AK057727 AK314745	34739	+	NM_033518|SLC38A5|92745|solute carrier family 38, member 5##AF276889|SLC38A5|92745|solute carrier family 38, member 5##BC019246|SLC38A5|92745|solute carrier family 38, member 5##AK094788|SLC38A5|92745|solute carrier family 38, member 5##AK024023|FTSJ1|24140|FtsJ homolog 1 (E. coli)##NM_012280|FTSJ1|24140|FtsJ homolog 1 (E. coli)##NM_177439|FTSJ1|24140|FtsJ homolog 1 (E. coli)##AJ005892|FTSJ1|24140|FtsJ homolog 1 (E. coli)##AK297486|FTSJ1|24140|FtsJ homolog 1 (E. coli)##AK315138|FTSJ1|24140|FtsJ homolog 1 (E. coli)##BC021047|FTSJ1|24140|FtsJ homolog 1 (E. coli)##BC023584|FTSJ1|24140|FtsJ homolog 1 (E. coli)##AF063015|FTSJ1|24140|FtsJ homolog 1 (E. coli)##NM_177434|FTSJ1|24140|FtsJ homolog 1 (E. coli)##NM_022825|PORCN|64840|porcupine homolog (Drosophila)##NM_203473|PORCN|64840|porcupine homolog (Drosophila)##AK293347|PORCN|64840|porcupine homolog (Drosophila)##AK056340|PORCN|64840|porcupine homolog (Drosophila)##BC019080|PORCN|64840|porcupine homolog (Drosophila)##AK057727|PORCN|64840|porcupine homolog (Drosophila)##AK314745|PORCN|64840|porcupine homolog (Drosophila)	0.0	
chr10	134185424	134185587	reg1032641.p1	4.606	+	TSC_hg19_v1_chr10_+_134145696 AK098652 BC050097 AK295953 AB051461 BC029902 NM_001143757 AK097418	-39795	+	TSC_hg19_v1_chr10_+_134145617 NM_001143758 NM_001143759 NM_030626	-39891	+	TSC_hg19_v1_chr10_-_134145360 AK098366 AK308956 BC042566	-40159	-	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	25204	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	73178	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	165807	+	AK098652|LRRC27|80313|leucine rich repeat containing 27##BC050097|LRRC27|80313|leucine rich repeat containing 27##AK295953|LRRC27|80313|leucine rich repeat containing 27##AB051461|LRRC27|80313|leucine rich repeat containing 27##BC029902|LRRC27|80313|leucine rich repeat containing 27##NM_001143757|LRRC27|80313|leucine rich repeat containing 27##AK097418|LRRC27|80313|leucine rich repeat containing 27##NM_001143758|LRRC27|80313|leucine rich repeat containing 27##NM_001143759|LRRC27|80313|leucine rich repeat containing 27##NM_030626|LRRC27|80313|leucine rich repeat containing 27##AK098366|STK32C|282974|serine/threonine kinase 32C##AK308956|STK32C|282974|serine/threonine kinase 32C##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa	0.231738	CTCF.p2:-4:0.232
chr12	1909913	1910016	reg1028679.p1	4.606	+	TSC_hg19_v1_chr12_+_1800235 AK128511 AK127111 BC051858 NM_024551	-109747	+	AK127196 TSC_hg19_v1_chr12_+_1800187	-109798	+	BC001749 NM_032642	-171553	+	BC048288 TSC_hg19_v1_chr12_-_1920907 AK301234	10960	-	NM_001039029 NM_001163925 NM_001163926	19468	+	TSC_hg19_v1_chr12_+_1929658 AK125402 AK095610 BC146894 BC146910 AK124687	19795	+	AK128511|ADIPOR2|79602|adiponectin receptor 2##BC051858|ADIPOR2|79602|adiponectin receptor 2##NM_024551|ADIPOR2|79602|adiponectin receptor 2##AK127196|ADIPOR2|79602|adiponectin receptor 2##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC048288|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##AK301234|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##NM_001039029|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##NM_001163925|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##NM_001163926|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK125402|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK095610|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##BC146894|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##BC146910|LRTM2|654429|leucine-rich repeats and transmembrane domains 2##AK124687|LRTM2|654429|leucine-rich repeats and transmembrane domains 2	0.0	
chr13	94844967	94845080	reg1033114.p1	4.606	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	-965596	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-2794119	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-6520154	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	286803	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	403406	-	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	403473	-	NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase	0.997114	CTCF.p2:17:0.997
chr3	67040910	67041053	reg1019418.p2	4.606	+	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	-489517	-	AF381545 BC140907 NM_015541 AY730707	-490129	-	TSC_hg19_v1_chr3_+_66444897 AB075504	-596022	+	NM_032505 AK096640 AK300397	7747	+	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	664081	-	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	664169	+	AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit	0.506144	CTCF.p2:18:0.506
chr7	139330537	139330662	reg1000701.p1	4.606	+	NM_001080511	-121926	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-162167	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-285585	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	147306	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	147440	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	198493	+	NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.0	
chr7	40369443	40369600	reg1007841.p2	4.606	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-194912	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-194990	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	-195390	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	1373164	-	NM_000168	1907096	-	TSC_hg19_v1_chr7_-_42276797 AK308429	1907274	-	AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3	0.0	
chr12	103942327	103942498	reg1002633.p2	4.605	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	-52666	-	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-590320	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-590891	+	AY311388 AJ295695 NM_017564 AB052958	38649	+	AB032773 TSC_hg19_v1_chr12_-_104234857	292412	-	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	292567	-	AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3	0.0	
chr22	23939941	23940052	reg1031534.p1	4.605	+	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	-17561	-	TSC_hg19_v1_chr22_-_23744738 AK056130 AK092581 AX747609 AK092530 AX747585	-195253	-	TSC_hg19_v1_chr22_+_23540316 X14677 X14675	-399591	+	BC056888 AL080197 BC063390 AK310349 NM_016449	34500	-	AY101396 NM_153615	93051	+	TSC_hg19_v1_chr22_-_24059494 BC033757	119469	-	DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##AK056130|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092581|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092530|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43##AY101396|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4##NM_153615|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4	0.322392	CTCF.p2:-38:0.322
chr3	156806424	156806604	reg1029106.p1	4.605	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-262403	+	BC034397 NM_001184718	-412062	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-413099	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	71395	-	NM_020307 AK122738	72000	-	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	348136	+	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long	0.0	
chr4	78915723	78915844	reg1029233.p1	4.605	+	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	-131869	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	-175239	-	AF044197 NM_006419	-482878	+	NM_001166133 NM_025074 TSC_hg19_v1_chr4_+_78978757 AK096838	62957	+	BC006366 TSC_hg19_v1_chr4_-_79103287	187502	-	NM_005139 TSC_hg19_v1_chr4_+_79472790	556987	+	NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_001166133|FRAS1|80144|Fraser syndrome 1##NM_025074|FRAS1|80144|Fraser syndrome 1##AK096838|FRAS1|80144|Fraser syndrome 1##NM_005139|ANXA3|306|annexin A3	0.0	
chr6	106092195	106092375	reg1029564.p1	4.605	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-241290	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-241327	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-241439	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	441911	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	441950	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	454519	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.024096	
chr9	139159254	139159348	reg1025741.p1	4.605	+	BC047604 AB527428 TSC_hg19_v1_chr9_-_139137659 AJ318051 NM_181701	-21616	-	AF156888 NM_178138 AB593067 AB593063 AB593062	-62337	-	AB590758 AB593065 AF156889 NM_014564 AB593066 TSC_hg19_v1_chr9_-_139095090	-64313	-	BC009979 BC017353 NM_001145638 NM_015597 TSC_hg19_v1_chr9_+_139221994	62665	+	NM_001145639	88207	+	NM_001200003	89950	+	BC047604|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##AJ318051|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##NM_181701|QSOX2|169714|quiescin Q6 sulfhydryl oxidase 2##AF156888|LHX3|8022|LIM homeobox 3##NM_178138|LHX3|8022|LIM homeobox 3##AB593067|LHX3|8022|LIM homeobox 3##AB593063|LHX3|8022|LIM homeobox 3##AB593062|LHX3|8022|LIM homeobox 3##AB593065|LHX3|8022|LIM homeobox 3##AF156889|LHX3|8022|LIM homeobox 3##NM_014564|LHX3|8022|LIM homeobox 3##AB593066|LHX3|8022|LIM homeobox 3##BC009979|GPSM1|26086|G-protein signaling modulator 1##BC017353|GPSM1|26086|G-protein signaling modulator 1##NM_001145638|GPSM1|26086|G-protein signaling modulator 1##NM_015597|GPSM1|26086|G-protein signaling modulator 1##NM_001145639|GPSM1|26086|G-protein signaling modulator 1##NM_001200003|GPSM1|26086|G-protein signaling modulator 1	0.0	
chrX	79538179	79538342	reg1031266.p1	4.605	+	BC014194 NM_016954 AY035371 AB527983 CU680824	-260506	+	AK097514 NM_001109878 NM_001109879	-268006	+	AK313154 NM_001171581 NM_004867	-915233	-	AK128147 NM_001170574	52742	+	BX537938 NM_152630 BC030784 AK313875 BC028710 BC034979	137702	+	BC111490 AY497046 AY497048 AY497049 AY497050 AY497051 AY497052 AY497053 AY497054 AY497055 NM_153252	526947	-	BC014194|TBX22|50945|T-box 22##NM_016954|TBX22|50945|T-box 22##AY035371|TBX22|50945|T-box 22##AK097514|TBX22|50945|T-box 22##NM_001109878|TBX22|50945|T-box 22##NM_001109879|TBX22|50945|T-box 22##AK313154|ITM2A|9452|integral membrane protein 2A##NM_001171581|ITM2A|9452|integral membrane protein 2A##NM_004867|ITM2A|9452|integral membrane protein 2A##AK128147|FAM46D|169966|family with sequence similarity 46, member D##NM_001170574|FAM46D|169966|family with sequence similarity 46, member D##BX537938|FAM46D|169966|family with sequence similarity 46, member D##NM_152630|FAM46D|169966|family with sequence similarity 46, member D##BC030784|FAM46D|169966|family with sequence similarity 46, member D##AK313875|FAM46D|169966|family with sequence similarity 46, member D##BC028710|FAM46D|169966|family with sequence similarity 46, member D##BC034979|FAM46D|169966|family with sequence similarity 46, member D##BC111490|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497046|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497048|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497049|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497050|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497051|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497052|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497053|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497054|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497055|BRWD3|254065|bromodomain and WD repeat domain containing 3##NM_153252|BRWD3|254065|bromodomain and WD repeat domain containing 3	0.985028	CTCF.p2:-28:0.985
chr13	107272254	107272384	reg1007175.p1	4.604	+	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	-51834	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	-84970	-	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-1153728	+	NM_001080396	1247140	-	NM_002312 X83441	1594810	-	AK292419 AK314844 BC037491 NM_206937	1595556	-	BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A##NM_002312|LIG4|3981|ligase IV, DNA, ATP-dependent##X83441|LIG4|3981|ligase IV, DNA, ATP-dependent##AK292419|LIG4|3981|ligase IV, DNA, ATP-dependent##AK314844|LIG4|3981|ligase IV, DNA, ATP-dependent##BC037491|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_206937|LIG4|3981|ligase IV, DNA, ATP-dependent	0.0	
chr16	13967821	13967933	reg1025930.p2	4.604	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-972409	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-1070158	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-1070226	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	46154	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	197209	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	312641	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.998636	CTCF.p2:18:0.999
chr2	215695626	215695729	reg1028538.p2	4.604	+	AB590656 JF790283 JF790285 JF790287 TSC_hg19_v1_chr2_-_215674408 BC126426 BC126428 AX794378 JF790280 JF790281 JF790282 JF790284 U76638 AK314260 AK301843 JF790286 AK223409 NM_000465	-21318	-	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	-419217	+	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	-1546520	+	AY033486 NM_015657	201132	-	BC144073 AY219711 NM_173076	307432	-	NM_004044 TSC_hg19_v1_chr2_+_216176781 AK313066 D82348 AK298142	481061	+	JF790283|BARD1|580|BRCA1 associated RING domain 1##JF790285|BARD1|580|BRCA1 associated RING domain 1##JF790287|BARD1|580|BRCA1 associated RING domain 1##BC126426|BARD1|580|BRCA1 associated RING domain 1##BC126428|BARD1|580|BRCA1 associated RING domain 1##AX794378|BARD1|580|BRCA1 associated RING domain 1##JF790280|BARD1|580|BRCA1 associated RING domain 1##JF790281|BARD1|580|BRCA1 associated RING domain 1##JF790282|BARD1|580|BRCA1 associated RING domain 1##JF790284|BARD1|580|BRCA1 associated RING domain 1##U76638|BARD1|580|BRCA1 associated RING domain 1##AK314260|BARD1|580|BRCA1 associated RING domain 1##AK301843|BARD1|580|BRCA1 associated RING domain 1##JF790286|BARD1|580|BRCA1 associated RING domain 1##AK223409|BARD1|580|BRCA1 associated RING domain 1##NM_000465|BARD1|580|BRCA1 associated RING domain 1##BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##AY033486|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_015657|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##BC144073|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##AY219711|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_173076|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_004044|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK313066|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##D82348|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK298142|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase	0.509546	CTCF.p2:8:0.510
chr10	30818355	30818536	reg1026149.p1	4.603	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-95324	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-95506	+	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	-180212	-	AF139543 BC066294 NM_183058	100190	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	470007	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	502376	-	AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438	0.0	
chr10	70825694	70825825	reg1029491.p2	4.603	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-77224	+	BC104671 NM_004728 TSC_hg19_v1_chr10_+_70715925 BC009432 U41387 AK315585 BC008071 BC004182 BC017228 AB527408 CU675917	-109827	+	TSC_hg19_v1_chr10_+_70661097 CU674120 DQ892547 DQ895758	-164642	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	22077	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	22125	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	58132	+	NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##BC104671|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##NM_004728|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC009432|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##U41387|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##AK315585|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC008071|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC004182|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC017228|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##DQ892547|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##DQ895758|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##NM_002727|SRGN|5552|serglycin##D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.0	
chr10	84713807	84713930	reg1030697.p1	4.603	+	DQ857894 NM_001165973	-1076426	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-1078786	+	AK123978 NM_001145719	-2413294	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	1185389	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	1217924	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	1219691	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.0	
chr11	75864374	75864554	reg1030673.p2	4.603	+	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	-338186	+	NM_003369 TSC_hg19_v1_chr11_+_75526233 AK291011	-338242	+	TSC_hg19_v1_chr11_+_75479822 AB048286 AY780646 AY358532 AL834287 AF384161 CU677247 AY780647	-384541	+	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	53048	-	TSC_hg19_v1_chr11_-_75921806 AK075540	57340	-	TSC_hg19_v1_chr11_-_76091995 AB590785 AF007393 AF081567 HQ258648 NM_004705 AK291843 BC117138 BC117140 BC110304	227544	-	BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##NM_003369|UVRAG|7405|UV radiation resistance associated gene##AK291011|UVRAG|7405|UV radiation resistance associated gene##AB048286|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY358532|DGAT2|84649|diacylglycerol O-acyltransferase 2##AL834287|DGAT2|84649|diacylglycerol O-acyltransferase 2##AF384161|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY780647|DGAT2|84649|diacylglycerol O-acyltransferase 2##BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11##AK075540|WNT11|7481|wingless-type MMTV integration site family, member 11##AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)	0.0	
chr14	25869937	25870044	reg1030011.p1	4.603	+	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	-350752	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-766572	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-791129	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1196998	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	3366238	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	3366923	+	BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1	0.978948	CTCF.p2:22:0.979
chr15	100036410	100036591	reg1026492.p2	4.603	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-244858	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-245084	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-246794	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	69653	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	69694	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	69735	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.0	
chr15	31780673	31780853	reg1004634.p3	4.603	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-161425	+	NM_001243538	-257714	-	GQ502181 HM135791 NM_001252020	-327335	-	AJ430383 NM_130901	166778	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	382066	-	TSC_hg19_v1_chr15_-_32162898 AK126002	382180	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr3	12828991	12829084	reg1030207.p1	4.603	+	AK001898 BC020658 AK092470 AX747561 NM_018306	-28264	-	TSC_hg19_v1_chr3_-_12705626 NM_002880	-123363	-	TSC_hg19_v1_chr3_-_12705617 BC018119 AK226028 AK303561	-123422	-	GU727621 NM_001162499 NM_012298 BC136592 AB014567	9169	+	NM_001007074	52911	-	BC011514 BC070209 X03342 D28385 AK311909 TSC_hg19_v1_chr3_-_12883042 NM_000994 NM_001007073	54006	-	AK001898|TMEM40|55287|transmembrane protein 40##BC020658|TMEM40|55287|transmembrane protein 40##AK092470|TMEM40|55287|transmembrane protein 40##NM_018306|TMEM40|55287|transmembrane protein 40##NM_002880|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##BC018119|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK226028|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK303561|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##GU727621|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_001162499|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_012298|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##BC136592|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##AB014567|CAND2|23066|cullin-associated and neddylation-dissociated 2 (putative)##NM_001007074|RPL32|6161|ribosomal protein L32##BC011514|RPL32|6161|ribosomal protein L32##BC070209|RPL32|6161|ribosomal protein L32##X03342|RPL32|6161|ribosomal protein L32##D28385|RPL32|6161|ribosomal protein L32##AK311909|RPL32|6161|ribosomal protein L32##NM_000994|RPL32|6161|ribosomal protein L32##NM_001007073|RPL32|6161|ribosomal protein L32	0.889854	CTCF.p2:-3:0.890
chr5	138940508	138940613	reg1027129.p1	4.603	+	NM_198282 TSC_hg19_v1_chr5_-_138862344	-78217	-	TSC_hg19_v1_chr5_-_138862306 AK095896 AX775913 BC047779 AK290661	-78288	-	AK304726 BC146912 BC146913 DQ462572 NM_001077693 EU025066 TSC_hg19_v1_chr5_-_138842329	-98250	-	TSC_hg19_v1_chr5_+_138940760 BC033349 NM_003339 NM_181838 BC048426	213	+	TSC_hg19_v1_chr5_+_138940966 AK001428 BC019052 AK001311 AY651263	365	+	TSC_hg19_v1_chr5_+_138941350 U39317 AB590980	788	+	NM_198282|TMEM173|340061|transmembrane protein 173##AK095896|TMEM173|340061|transmembrane protein 173##AX775913|TMEM173|340061|transmembrane protein 173##BC047779|TMEM173|340061|transmembrane protein 173##AK290661|TMEM173|340061|transmembrane protein 173##BC146912|ECSCR|641700|endothelial cell-specific chemotaxis regulator##BC146913|ECSCR|641700|endothelial cell-specific chemotaxis regulator##DQ462572|ECSCR|641700|endothelial cell-specific chemotaxis regulator##NM_001077693|ECSCR|641700|endothelial cell-specific chemotaxis regulator##EU025066|ECSCR|641700|endothelial cell-specific chemotaxis regulator##BC033349|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_003339|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_181838|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC048426|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001428|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC019052|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001311|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AY651263|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##U39317|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2	0.0	
chr6	16129249	16129430	reg1002696.p3	4.603	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	-37	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-466049	-	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	-466162	-	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	98	+	TSC_hg19_v1_chr6_+_16143281 AK026739	13971	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	109512	+	AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase	0.024722	
chr6	88878295	88878394	reg1029684.p2	4.603	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-2578	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-23308	-	BC029488 NM_030960 AF203447	-120814	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	794847	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	794964	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	795003	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.0	
chr7	98408876	98409053	reg1024124.p1	4.603	+	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	-162228	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-378531	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-378670	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	58566	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	58663	-	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	58712	-	NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130	0.0	
chr9	128908632	128908791	reg1031718.p2	4.603	+	AK309713 NM_001134778	-398234	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-399011	+	TSC_hg19_v1_chr9_-_128469506 AY524429 AY524430 AY524431 AY524432 NM_001006617 NM_001006618 NM_001006619 NM_001006620 NM_001006621 NM_024117	-439192	-	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	180456	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	468050	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	658599	+	AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##AY524429|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524430|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524431|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524432|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006617|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006618|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006619|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006620|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006621|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_024117|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43	0.673199	CTCF.p2:5:0.673
chr14	71867637	71867807	reg1030028.p2	4.602	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-493271	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-493589	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-591913	-	AF090989 AF090990 NM_015556	128319	+	AK294895 NM_001204423	531094	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	531431	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.0	
chr16	28814064	28814221	reg1005164.p2	4.602	+	BC157849 AB527254 DQ891632 DQ894822 TSC_hg19_v1_chr16_+_28723065	-91120	+	BC107692 NM_001037808 NM_003752 TSC_hg19_v1_chr16_+_28722786 AK301183 NM_001099661 AK301233 AK304500 AK055366 AK299421 AK303790 BC001571 BC000533 AY762099 AK293264 AK000739 BC071705	-91323	+	AK292155 NM_001199142 BC157842	-114209	+	TSC_hg19_v1_chr16_+_28834364 AK289981	20223	+	TSC_hg19_v1_chr16_+_28834372 BC068012	20246	+	TSC_hg19_v1_chr16_+_28834434 AJ317970 AJ317971 AJ317972 AJ317973 AJ317974 NM_007245 NM_145714 NM_148414 NM_148415 NM_148416 BC136584 BC144269	20284	+	BC157849|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ891632|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##DQ894822|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC107692|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001037808|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_003752|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK301183|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001099661|EIF3CL|728689|eukaryotic translation initiation factor 3, subunit C-like##AK301233|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK304500|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK055366|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK299421|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK303790|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC001571|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC000533|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AY762099|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK293264|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK000739|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC071705|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK289981|ATXN2L|11273|ataxin 2-like##BC068012|ATXN2L|11273|ataxin 2-like##AJ317970|ATXN2L|11273|ataxin 2-like##AJ317971|ATXN2L|11273|ataxin 2-like##AJ317972|ATXN2L|11273|ataxin 2-like##AJ317973|ATXN2L|11273|ataxin 2-like##AJ317974|ATXN2L|11273|ataxin 2-like##NM_007245|ATXN2L|11273|ataxin 2-like##NM_145714|ATXN2L|11273|ataxin 2-like##NM_148414|ATXN2L|11273|ataxin 2-like##NM_148415|ATXN2L|11273|ataxin 2-like##NM_148416|ATXN2L|11273|ataxin 2-like##BC136584|ATXN2L|11273|ataxin 2-like##BC144269|ATXN2L|11273|ataxin 2-like	0.0	
chr22	42322175	42322277	reg1026876.p2	4.602	+	NM_001207020	-11556	-	TSC_hg19_v1_chr22_+_42229269 CU013184 CU013472 AB463291	-92955	+	TSC_hg19_v1_chr22_+_42229253 BC056158 U02031 BC051385 CT841522 AK299914	-93025	+	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	573	-	EU035297 NM_001110215	13996	-	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	20897	-	NM_001207020|SHISA8|440829|shisa homolog 8 (Xenopus laevis)##CU013184|SREBF2|6721|sterol regulatory element binding transcription factor 2##CU013472|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC056158|SREBF2|6721|sterol regulatory element binding transcription factor 2##U02031|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051385|SREBF2|6721|sterol regulatory element binding transcription factor 2##CT841522|SREBF2|6721|sterol regulatory element binding transcription factor 2##AK299914|SREBF2|6721|sterol regulatory element binding transcription factor 2##AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M	0.0	
chr3	77087663	77087783	reg1033207.p1	4.602	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-1253021	-	NM_001128223	-1253469	-	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	-1366237	+	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	1557	+	TSC_hg19_v1_chr3_-_78666943 AK025535	1579262	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	1980864	-	AK123776|ZNF717|100131827|zinc finger protein 717##NM_001128223|ZNF717|100131827|zinc finger protein 717##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)	0.993357	CTCF.p2:1:0.993
chr4	15758285	15758382	reg1027046.p1	4.602	+	TSC_hg19_v1_chr4_+_15704753 AB175627 AB590680 BT019502	-53574	+	TSC_hg19_v1_chr4_+_15704695 AK312497 BC012095	-53638	+	NM_004334 D21878 TSC_hg19_v1_chr4_+_15704687	-53704	+	TSC_hg19_v1_chr4_+_15779950 AK303169 NM_001775 D84276 AK313268 M34461 BC007964 D84277 DQ893184 EU176777 AK297592	21638	+	BC003628 M60047 BC008910 BC018852 AK291307 TSC_hg19_v1_chr4_-_15939972	181627	-	NM_005130	182029	-	AB175627|BST1|683|bone marrow stromal cell antigen 1##BT019502|BST1|683|bone marrow stromal cell antigen 1##AK312497|BST1|683|bone marrow stromal cell antigen 1##BC012095|BST1|683|bone marrow stromal cell antigen 1##NM_004334|BST1|683|bone marrow stromal cell antigen 1##D21878|BST1|683|bone marrow stromal cell antigen 1##AK303169|CD38|952|CD38 molecule##NM_001775|CD38|952|CD38 molecule##D84276|CD38|952|CD38 molecule##AK313268|CD38|952|CD38 molecule##M34461|CD38|952|CD38 molecule##BC007964|CD38|952|CD38 molecule##D84277|CD38|952|CD38 molecule##DQ893184|CD38|952|CD38 molecule##EU176777|CD38|952|CD38 molecule##AK297592|CD38|952|CD38 molecule##BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1##M60047|FGFBP1|9982|fibroblast growth factor binding protein 1##BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1##BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1##AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1##NM_005130|FGFBP1|9982|fibroblast growth factor binding protein 1	0.344623	CTCF.p2:7:0.345
chr8	101507644	101507746	reg1022928.p4	4.602	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-185410	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-185514	-	AB271913 AB271914 AB029316 NM_015435	-192224	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	64245	-	AK093906 AX748361 NM_152628	154197	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	226111	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr17	57906623	57906789	reg1024934.p1	4.601	+	TSC_hg19_v1_chr17_+_57785080 AK293664	-121633	+	AK294854 TSC_hg19_v1_chr17_+_57785025 AF214006 AX775965	-121671	+	BC009758 TSC_hg19_v1_chr17_+_57785014 AK024969	-121690	+	TSC_hg19_v1_chr17_+_57915291 AK310806	8600	+	AK024096 AK298492 AK301312 BC000258 AK022771 AK315172 NM_001193609 NM_001193610 NM_001193611 NM_001193612 NM_001193613 NM_016261	63485	-	NM_003161 BC036033 TSC_hg19_v1_chr17_+_57970481 AK293247	63756	+	AK293664|VMP1|81671|vacuole membrane protein 1##AK294854|VMP1|81671|vacuole membrane protein 1##AF214006|VMP1|81671|vacuole membrane protein 1##AX775965|VMP1|81671|vacuole membrane protein 1##BC009758|VMP1|81671|vacuole membrane protein 1##AK024969|VMP1|81671|vacuole membrane protein 1##AK024096|TUBD1|51174|tubulin, delta 1##AK298492|TUBD1|51174|tubulin, delta 1##AK301312|TUBD1|51174|tubulin, delta 1##BC000258|TUBD1|51174|tubulin, delta 1##AK022771|TUBD1|51174|tubulin, delta 1##AK315172|TUBD1|51174|tubulin, delta 1##NM_001193609|TUBD1|51174|tubulin, delta 1##NM_001193610|TUBD1|51174|tubulin, delta 1##NM_001193611|TUBD1|51174|tubulin, delta 1##NM_001193612|TUBD1|51174|tubulin, delta 1##NM_001193613|TUBD1|51174|tubulin, delta 1##NM_016261|TUBD1|51174|tubulin, delta 1##NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	0.0	
chr17	78944115	78944295	reg1003365.p1	4.601	+	TSC_hg19_v1_chr17_+_78935064 BC073898	-9073	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-425387	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-425556	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	21436	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	21489	+	AK124762 TSC_hg19_v1_chr17_-_79008489 AK056555	64242	-	BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6##AK124762|FLJ90757|440465|uncharacterized LOC440465##AK056555|FLJ90757|440465|uncharacterized LOC440465	0.0	
chr18	51751021	51751108	reg1011267.p1	4.601	+	TSC_hg19_v1_chr18_-_51750997 BC032638	-99	-	AF072246 TSC_hg19_v1_chr18_-_51750614	-527	-	TSC_hg19_v1_chr18_-_51690988 AL110266	-60072	-	TSC_hg19_v1_chr18_-_51751035 AF072242 NM_003927 NM_015832	13	-	NM_007195 TSC_hg19_v1_chr18_+_51795943 AK301578 AF140501 BC032617 BC032662 AL136670 AF245438 AK093688 AB463184 AM392978 DQ890893 DQ896811 CU689468	44876	+	AB528241 AF480305 NM_139171	129878	-	BC032638|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072242|MBD2|8932|methyl-CpG binding domain protein 2##NM_003927|MBD2|8932|methyl-CpG binding domain protein 2##NM_015832|MBD2|8932|methyl-CpG binding domain protein 2##NM_007195|POLI|11201|polymerase (DNA directed) iota##AK301578|POLI|11201|polymerase (DNA directed) iota##AF140501|POLI|11201|polymerase (DNA directed) iota##BC032617|POLI|11201|polymerase (DNA directed) iota##BC032662|POLI|11201|polymerase (DNA directed) iota##AL136670|POLI|11201|polymerase (DNA directed) iota##AF245438|POLI|11201|polymerase (DNA directed) iota##AK093688|POLI|11201|polymerase (DNA directed) iota##AM392978|POLI|11201|polymerase (DNA directed) iota##DQ890893|POLI|11201|polymerase (DNA directed) iota##DQ896811|POLI|11201|polymerase (DNA directed) iota##AF480305|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_139171|STARD6|147323|StAR-related lipid transfer (START) domain containing 6	0.0	
chr18	72792392	72792527	reg1029492.p1	4.601	+	NM_001146189 NM_001146190 NM_017757	-449541	+	TSC_hg19_v1_chr18_+_72265126 AK056288	-527328	+	TSC_hg19_v1_chr18_-_72265072 BC036588	-527399	-	TSC_hg19_v1_chr18_-_72920993 CU687330 CU689738	128542	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	128653	-	BC018081 NM_175907 TSC_hg19_v1_chr18_-_72921324	128846	-	NM_001146189|ZNF407|55628|zinc finger protein 407##NM_001146190|ZNF407|55628|zinc finger protein 407##NM_017757|ZNF407|55628|zinc finger protein 407##AK056288|ZNF407|55628|zinc finger protein 407##BC036588|LOC400657|400657|uncharacterized LOC400657##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	0.411877	CTCF.p2:21:0.412
chr7	139305702	139305882	reg1027437.p1	4.601	+	NM_001080511	-97119	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-137360	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-260778	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	172113	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	172247	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	223300	+	NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.17903	
chr7	45796526	45796637	reg1028514.p1	4.601	+	AB209496 TSC_hg19_v1_chr7_+_45614187	-182382	+	TSC_hg19_v1_chr7_+_45614105 AF497515 NM_021116	-182479	+	NM_005856 TSC_hg19_v1_chr7_+_45197392 AJ001016 BC022304 BC053852 AK222469 DQ891371 CU691036 AK311871 AY265459	-599185	+	TSC_hg19_v1_chr7_-_45808577 AL832059 BC092503	12009	-	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	131524	+	AF042356 TSC_hg19_v1_chr7_+_45933167	136553	+	AB209496|ADCY1|107|adenylate cyclase 1 (brain)##AF497515|ADCY1|107|adenylate cyclase 1 (brain)##NM_021116|ADCY1|107|adenylate cyclase 1 (brain)##NM_005856|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AJ001016|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC022304|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##BC053852|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK222469|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##DQ891371|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AK311871|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AY265459|RAMP3|10268|receptor (G protein-coupled) activity modifying protein 3##AL832059|SEPT7P2|641977|septin 7 pseudogene 2##BC092503|SEPT7P2|641977|septin 7 pseudogene 2##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1	0.197891	
chr10	68685705	68685838	reg1031446.p1	4.600	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-3404530	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-3404609	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-3404656	+	NM_178011 BX640611 AY358315 BC111492	44	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	739625	-	AF091606 AK313882 NM_013266	770166	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.0	
chr14	35761247	35761427	reg1031990.p1	4.600	+	TSC_hg19_v1_chr14_+_35591757 AK301931 BC050339 BC044580 BC001542 AK304066 BC032221 NM_014672 AB002389 BX161394 BX161487 AK303508	-169485	+	AK293717 BX248043 TSC_hg19_v1_chr14_-_35591728	-169647	-	AK000651 AK225512 AK225447 TSC_hg19_v1_chr14_-_35591505 BC063438 BC100021 AY157304 AY157305 NM_017917	-169859	-	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	234	+	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	306	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	112587	-	AK301931|KIAA0391|9692|KIAA0391##BC044580|KIAA0391|9692|KIAA0391##BC001542|KIAA0391|9692|KIAA0391##AK304066|KIAA0391|9692|KIAA0391##BC032221|KIAA0391|9692|KIAA0391##NM_014672|KIAA0391|9692|KIAA0391##AB002389|KIAA0391|9692|KIAA0391##BX161394|KIAA0391|9692|KIAA0391##BX161487|KIAA0391|9692|KIAA0391##AK303508|KIAA0391|9692|KIAA0391##AK293717|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BX248043|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK000651|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK225512|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK225447|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BC063438|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BC100021|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AY157304|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AY157305|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##NM_017917|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	0.0	
chr2	19562654	19562835	reg1011912.p1	4.600	+	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	-4365	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	-791934	-	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	-820828	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	505891	+	TSC_hg19_v1_chr2_-_20101456 BC050088	538684	-	CU691276 BC070381 TSC_hg19_v1_chr2_-_20101717 BC057850 NM_001008237	538937	-	BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946##BC070381|TTC32|130502|tetratricopeptide repeat domain 32##BC057850|TTC32|130502|tetratricopeptide repeat domain 32##NM_001008237|TTC32|130502|tetratricopeptide repeat domain 32	0.033304	
chr4	134241871	134241993	reg1030704.p1	4.600	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	-168649	+	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	-171476	+	NM_001099783	-4224651	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	880986	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	4211660	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	4211710	-	AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18	0.963405	CTCF.p2:-11:0.963
chr7	38398775	38398925	reg1032310.p1	4.600	+	TSC_hg19_v1_chr7_-_38389583 BC035592	-9261	-	Y00482 TSC_hg19_v1_chr7_-_38389512	-9374	-	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	-23646	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	272112	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	272227	-	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	549943	-	BC035592|TRGV5|6978|T cell receptor gamma variable 5##BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)	0.998956	CTCF.p2:-3:0.999
chr7	41922587	41922714	reg1027338.p2	4.600	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-179965	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1748041	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1748119	+	NM_000168	353967	-	TSC_hg19_v1_chr7_-_42276797 AK308429	354145	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	1028939	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.0	
chr9	93536034	93536162	reg1032848.p1	4.600	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	-130979	-	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-1316117	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-1423091	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	27938	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	27969	+	TSC_hg19_v1_chr9_+_93564079 L28824	27980	+	BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase##L28824|SYK|6850|spleen tyrosine kinase	0.872875	CTCF.p2:-10:0.873
chr12	129314464	129314645	reg1030556.p1	4.599	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	-6111	-	NM_001136103	-562607	+	NM_052907	-3503393	+	BC043528 TSC_hg19_v1_chr12_+_129337985	23430	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	23533	+	BC114626 BC114936 NM_133448 AB061814	1073657	-	BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D	0.0	
chr17	63414924	63415004	reg1026257.p2	4.599	+	TSC_hg19_v1_chr17_+_63133501 AK309061 AK290535 BC022504 AK301719 AF071476 AK289876 AF493933 AY585191	-281385	+	NM_001081955 NM_001165933 NM_003835 TSC_hg19_v1_chr17_+_63133479	-281494	+	TSC_hg19_v1_chr17_-_63052903 AK301699 NM_006572	-362063	-	BC006295 TSC_hg19_v1_chr17_-_63556453	141511	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	142715	-	CR933657 TSC_hg19_v1_chr17_-_63557767	142804	-	AK309061|RGS9|8787|regulator of G-protein signaling 9##AK290535|RGS9|8787|regulator of G-protein signaling 9##BC022504|RGS9|8787|regulator of G-protein signaling 9##AK301719|RGS9|8787|regulator of G-protein signaling 9##AF071476|RGS9|8787|regulator of G-protein signaling 9##AK289876|RGS9|8787|regulator of G-protein signaling 9##AF493933|RGS9|8787|regulator of G-protein signaling 9##AY585191|RGS9|8787|regulator of G-protein signaling 9##NM_001081955|RGS9|8787|regulator of G-protein signaling 9##NM_001165933|RGS9|8787|regulator of G-protein signaling 9##NM_003835|RGS9|8787|regulator of G-protein signaling 9##AK301699|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_006572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC006295|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##CR933657|AXIN2|8313|axin 2	0.080293	
chr17	73826262	73826372	reg1027648.p1	4.599	+	TSC_hg19_v1_chr17_+_73780952 BC080657 AB384286	-45368	+	TSC_hg19_v1_chr17_+_73780918 AK307289 NM_001080419 BC046175 BC039606 BC064927 AB051540 BC053362 BC033751	-45427	+	BC108701 AF218029 BC001124 BC006497 BC012813 BC017558 TSC_hg19_v1_chr17_-_73775861 BX647280 AK130772 AK304607 AK312762 BX537379 NM_005324	-50476	-	EU831417 EU831510 TSC_hg19_v1_chr17_-_73840455 AK301529 AJ578444	14132	-	TSC_hg19_v1_chr17_-_73840495 AK024474	14194	-	TSC_hg19_v1_chr17_-_73840622 BC067084 NM_199242 AK300316	14467	-	BC080657|UNK|85451|unkempt homolog (Drosophila)##AK307289|UNK|85451|unkempt homolog (Drosophila)##NM_001080419|UNK|85451|unkempt homolog (Drosophila)##BC046175|UNK|85451|unkempt homolog (Drosophila)##BC039606|UNK|85451|unkempt homolog (Drosophila)##BC064927|UNK|85451|unkempt homolog (Drosophila)##AB051540|UNK|85451|unkempt homolog (Drosophila)##BC053362|UNK|85451|unkempt homolog (Drosophila)##BC033751|UNK|85451|unkempt homolog (Drosophila)##BC108701|H3F3B|3021|H3 histone, family 3B (H3.3B)##AF218029|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC001124|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC006497|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC012813|H3F3B|3021|H3 histone, family 3B (H3.3B)##BC017558|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX647280|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK130772|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK304607|H3F3B|3021|H3 histone, family 3B (H3.3B)##AK312762|H3F3B|3021|H3 histone, family 3B (H3.3B)##BX537379|H3F3B|3021|H3 histone, family 3B (H3.3B)##NM_005324|H3F3B|3021|H3 histone, family 3B (H3.3B)##EU831417|UNC13D|201294|unc-13 homolog D (C. elegans)##EU831510|UNC13D|201294|unc-13 homolog D (C. elegans)##AK301529|UNC13D|201294|unc-13 homolog D (C. elegans)##AJ578444|UNC13D|201294|unc-13 homolog D (C. elegans)##AK024474|UNC13D|201294|unc-13 homolog D (C. elegans)##BC067084|UNC13D|201294|unc-13 homolog D (C. elegans)##NM_199242|UNC13D|201294|unc-13 homolog D (C. elegans)##AK300316|UNC13D|201294|unc-13 homolog D (C. elegans)	0.754996	CTCF.p2:4:0.755
chr4	2933841	2933951	reg1021248.p2	4.599	+	AK025413 TSC_hg19_v1_chr4_+_2883766	-50195	+	TSC_hg19_v1_chr4_+_2845627 AH004561 S70310 BC013393 AK309186	-88230	+	TSC_hg19_v1_chr4_+_2845589 NM_001119 NM_014189 NM_014190 NM_176801	-88317	+	CU677155 EU176393 EU176739 L11669 TSC_hg19_v1_chr4_-_2935840	1851	-	TSC_hg19_v1_chr4_-_2935854 NM_001120	2011	-	TSC_hg19_v1_chr4_-_2936515 BC001502 BC014979	2591	-	AK025413|ADD1|118|adducin 1 (alpha)##S70310|ADD1|118|adducin 1 (alpha)##BC013393|ADD1|118|adducin 1 (alpha)##AK309186|ADD1|118|adducin 1 (alpha)##NM_001119|ADD1|118|adducin 1 (alpha)##NM_014189|ADD1|118|adducin 1 (alpha)##NM_014190|ADD1|118|adducin 1 (alpha)##NM_176801|ADD1|118|adducin 1 (alpha)##EU176393|MFSD10|10227|major facilitator superfamily domain containing 10##EU176739|MFSD10|10227|major facilitator superfamily domain containing 10##L11669|MFSD10|10227|major facilitator superfamily domain containing 10##NM_001120|MFSD10|10227|major facilitator superfamily domain containing 10##BC001502|MFSD10|10227|major facilitator superfamily domain containing 10##BC014979|MFSD10|10227|major facilitator superfamily domain containing 10	0.0	
chr5	172366178	172366301	reg1035120.p1	4.599	+	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	-104921	+	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	-168028	-	AF275799 TSC_hg19_v1_chr5_-_172083715	-282596	-	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	20209	+	NM_003945 TSC_hg19_v1_chr5_+_172410801 BC119715 BC119714 AK312068 Y15286	44543	+	TSC_hg19_v1_chr5_+_172410833 CR456856 CR542131	44605	+	NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1##NM_003945|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119715|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119714|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##AK312068|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##Y15286|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR456856|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR542131|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1	0.470314	CTCF.p2:-13:0.470
chr10	85185230	85185324	reg1027936.p1	4.598	+	DQ857894 NM_001165973	-1547835	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-1550195	+	AK123978 NM_001145719	-2884703	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	713980	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	746515	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	748282	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.068179	
chr1	232766518	232766614	reg1027020.p1	4.598	+	BC006013 NM_020808 AY168879	-115297	-	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	-1004011	+	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	-1102135	+	TSC_hg19_v1_chr1_-_232878472 AK093200	111891	-	NM_019090 BC109122	174138	+	AK290216 TSC_hg19_v1_chr1_+_232941173 BC036663 AB037804	174585	+	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1##FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##NM_019090|KIAA1383|54627|KIAA1383##BC109122|KIAA1383|54627|KIAA1383##AK290216|KIAA1383|54627|KIAA1383##BC036663|KIAA1383|54627|KIAA1383##AB037804|KIAA1383|54627|KIAA1383	0.272456	CTCF.p2:-60:0.256
chr19	1546578	1546689	reg1002016.p2	4.598	+	AK054808 NM_001243079	-22561	+	BC040620 NM_213604	-33446	-	TSC_hg19_v1_chr19_-_1513019 AK302020 AK131571	-33619	-	DQ225272 DQ225273 TSC_hg19_v1_chr19_-_1567994 AY950680 NM_001174118 NM_203304	21332	-	AB528617 AF072247 NM_003926 TSC_hg19_v1_chr19_-_1592683	46025	-	BC009372 TSC_hg19_v1_chr19_-_1592751 AK290882 BC043619	46095	-	AK054808|PLK5|126520|polo-like kinase 5##NM_001243079|PLK5|126520|polo-like kinase 5##BC040620|ADAMTSL5|339366|ADAMTS-like 5##NM_213604|ADAMTSL5|339366|ADAMTS-like 5##AK302020|ADAMTSL5|339366|ADAMTS-like 5##AK131571|ADAMTSL5|339366|ADAMTS-like 5##DQ225272|MEX3D|399664|mex-3 homolog D (C. elegans)##DQ225273|MEX3D|399664|mex-3 homolog D (C. elegans)##AY950680|MEX3D|399664|mex-3 homolog D (C. elegans)##NM_001174118|MEX3D|399664|mex-3 homolog D (C. elegans)##NM_203304|MEX3D|399664|mex-3 homolog D (C. elegans)##AF072247|MBD3|53615|methyl-CpG binding domain protein 3##NM_003926|MBD3|53615|methyl-CpG binding domain protein 3##BC009372|MBD3|53615|methyl-CpG binding domain protein 3##AK290882|MBD3|53615|methyl-CpG binding domain protein 3##BC043619|MBD3|53615|methyl-CpG binding domain protein 3	0.0	
chr4	14784851	14785032	reg1025133.p2	4.598	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-1155624	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-1235527	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-1238866	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	218768	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	219054	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	219356	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.0	
chr4	35910372	35910470	reg1032759.p2	4.598	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-5187962	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-5188227	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-5188422	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	335616	-	AK131492 NM_001136536 AK304357 AK316523	372825	+	BC157885 NM_001170700	375222	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.982502	CTCF.p2:0:0.921
chr6	10381650	10381751	reg1030271.p2	4.598	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-1945812	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-1945992	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-2278910	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	30916	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	33575	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	33768	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.895936	CTCF.p2:-13:0.896
chr6	66276103	66276243	reg1031984.p1	4.598	+	AF091622 BC113650 BC113652 NM_015153 D87685 AB385299	-1919731	+	TSC_hg19_v1_chr6_+_64346027 BX648268 AK290491	-1930156	+	TSC_hg19_v1_chr6_+_64345729 AK315868 AK298580	-1930350	+	AY358133 NM_198283 AK310478	13532	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	140920	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	2322855	-	AF091622|PHF3|23469|PHD finger protein 3##BC113650|PHF3|23469|PHD finger protein 3##BC113652|PHF3|23469|PHD finger protein 3##NM_015153|PHF3|23469|PHD finger protein 3##D87685|PHF3|23469|PHD finger protein 3##BX648268|PHF3|23469|PHD finger protein 3##AK290491|PHF3|23469|PHD finger protein 3##AK315868|PHF3|23469|PHD finger protein 3##AK298580|PHF3|23469|PHD finger protein 3##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3	0.282793	CTCF.p2:12:0.283
chr6	6856784	6856964	reg1029518.p1	4.598	+	BC039678 TSC_hg19_v1_chr6_+_6725205	-131713	+	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	-267924	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-535964	-	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	250952	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	251161	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	251349	+	NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1	0.0	
chr7	74064452	74064600	reg1034077.p1	4.598	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	-196091	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	-196218	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	-196362	+	AK292832 TSC_hg19_v1_chr7_+_74072028 AF015553 NM_001163636 NM_001518 NM_032999 NM_033000 NM_033001	7495	+	TSC_hg19_v1_chr7_+_74072046 BC070484	7518	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	7596	+	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AK292832|GTF2I|2969|general transcription factor IIi##AF015553|GTF2I|2969|general transcription factor IIi##NM_001163636|GTF2I|2969|general transcription factor IIi##NM_001518|GTF2I|2969|general transcription factor IIi##NM_032999|GTF2I|2969|general transcription factor IIi##NM_033000|GTF2I|2969|general transcription factor IIi##NM_033001|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi	0.0	
chr8	117740869	117740961	reg1030064.p2	4.598	+	TSC_hg19_v1_chr8_-_116681365 AF183810	-1059580	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	-1059750	-	TSC_hg19_v1_chr8_-_116680208 AK304046	-1060695	-	TSC_hg19_v1_chr8_-_117768041 BC000386 BT019594 CR456906 CU674186 AK222620 U54559 BC090880	27122	-	AK222520 TSC_hg19_v1_chr8_-_117768063 AK296162 NM_003756	27156	-	BC005955 BC022441 NM_032334 TSC_hg19_v1_chr8_+_117778752	37836	+	AF183810|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC000386|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BT019594|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##CR456906|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222620|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##U54559|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC090880|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222520|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK296162|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##NM_003756|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC005955|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC022441|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##NM_032334|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)	0.0	
chr1	155056676	155056791	reg1002975.p1	4.597	+	TSC_hg19_v1_chr1_+_155051392 BC017722 NM_004952 BC110406 U14187 AK296030 AK316248 L37360 DQ891668 DQ894854	-5393	+	TSC_hg19_v1_chr1_+_155036206 NM_005227 NM_182689 NM_182690 BC107483 AK301966 AJ006352 AJ006353 U14188 CR533569	-20483	+	TSC_hg19_v1_chr1_+_155023819 AK308172 AK295614 AK296925 AK297468 U41767 EU176173 AB590397 AY518542 BT009764 U46005	-32897	+	AK057845 TSC_hg19_v1_chr1_+_155099946	43208	+	AK313117 NM_004428 NM_182685 TSC_hg19_v1_chr1_+_155100351 AK289589 AK308965 AL833641 AK311677 BC032698 BC095432 M57730 CR457416 DQ890722 DQ893900	43645	+	TSC_hg19_v1_chr1_+_155108327 AK289551 NM_001122837 NM_001122839 NM_018845 AF126023 BC009621 AF126024 BC012378	51576	+	BC017722|EFNA3|1944|ephrin-A3##NM_004952|EFNA3|1944|ephrin-A3##BC110406|EFNA3|1944|ephrin-A3##U14187|EFNA3|1944|ephrin-A3##AK296030|EFNA3|1944|ephrin-A3##AK316248|EFNA3|1944|ephrin-A3##L37360|EFNA3|1944|ephrin-A3##DQ891668|EFNA3|1944|ephrin-A3##DQ894854|EFNA3|1944|ephrin-A3##NM_005227|EFNA4|1945|ephrin-A4##NM_182689|EFNA4|1945|ephrin-A4##NM_182690|EFNA4|1945|ephrin-A4##BC107483|EFNA4|1945|ephrin-A4##AJ006352|EFNA4|1945|ephrin-A4##AJ006353|EFNA4|1945|ephrin-A4##U14188|EFNA4|1945|ephrin-A4##CR533569|EFNA4|1945|ephrin-A4##AK308172|ADAM15|8751|ADAM metallopeptidase domain 15##AK295614|ADAM15|8751|ADAM metallopeptidase domain 15##AK296925|ADAM15|8751|ADAM metallopeptidase domain 15##AK297468|ADAM15|8751|ADAM metallopeptidase domain 15##U41767|ADAM15|8751|ADAM metallopeptidase domain 15##EU176173|ADAM15|8751|ADAM metallopeptidase domain 15##AY518542|ADAM15|8751|ADAM metallopeptidase domain 15##BT009764|ADAM15|8751|ADAM metallopeptidase domain 15##U46005|ADAM15|8751|ADAM metallopeptidase domain 15##AK057845|EFNA1|1942|ephrin-A1##AK313117|EFNA1|1942|ephrin-A1##NM_004428|EFNA1|1942|ephrin-A1##NM_182685|EFNA1|1942|ephrin-A1##AK289589|EFNA1|1942|ephrin-A1##AL833641|EFNA1|1942|ephrin-A1##BC032698|EFNA1|1942|ephrin-A1##BC095432|EFNA1|1942|ephrin-A1##M57730|EFNA1|1942|ephrin-A1##CR457416|EFNA1|1942|ephrin-A1##DQ890722|EFNA1|1942|ephrin-A1##DQ893900|EFNA1|1942|ephrin-A1##AK289551|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122837|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_001122839|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##NM_018845|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126023|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC009621|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##AF126024|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1##BC012378|SLC50A1|55974|solute carrier family 50 (sugar transporter), member 1	0.53746	CTCF.p2:4:0.537
chr12	103941887	103942010	reg1002633.p1	4.597	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	-52202	-	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-589856	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-590427	+	AY311388 AJ295695 NM_017564 AB052958	39113	+	AB032773 TSC_hg19_v1_chr12_-_104234857	292876	-	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	293031	-	AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3	0.0	
chr1	28526599	28526780	reg1030625.p2	4.597	+	S52624 AK292053 NM_001164721 NM_001164722	-6277	-	NM_000952 NM_001164723	-23235	-	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-111565	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	32842	-	TSC_hg19_v1_chr1_+_28562634 NM_016311 NM_178190 NM_178191 AK316600 BC009677 AK000934 AB029042 BT009849 CR457097 EU832478 EU832558 BC017562 BC004955	35960	+	TSC_hg19_v1_chr1_+_28586034 NM_031459 BC013304 AY123223 BC033719 AL136551 AK315710 DQ892827 DQ896073 EU831582 EU831667 AB529110 CU680558	59469	+	S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_016311|ATPIF1|93974|ATPase inhibitory factor 1##NM_178190|ATPIF1|93974|ATPase inhibitory factor 1##NM_178191|ATPIF1|93974|ATPase inhibitory factor 1##AK316600|ATPIF1|93974|ATPase inhibitory factor 1##BC009677|ATPIF1|93974|ATPase inhibitory factor 1##AK000934|ATPIF1|93974|ATPase inhibitory factor 1##AB029042|ATPIF1|93974|ATPase inhibitory factor 1##BT009849|ATPIF1|93974|ATPase inhibitory factor 1##CR457097|ATPIF1|93974|ATPase inhibitory factor 1##EU832478|ATPIF1|93974|ATPase inhibitory factor 1##EU832558|ATPIF1|93974|ATPase inhibitory factor 1##BC017562|ATPIF1|93974|ATPase inhibitory factor 1##BC004955|ATPIF1|93974|ATPase inhibitory factor 1##NM_031459|SESN2|83667|sestrin 2##BC013304|SESN2|83667|sestrin 2##AY123223|SESN2|83667|sestrin 2##BC033719|SESN2|83667|sestrin 2##AL136551|SESN2|83667|sestrin 2##AK315710|SESN2|83667|sestrin 2##DQ892827|SESN2|83667|sestrin 2##DQ896073|SESN2|83667|sestrin 2##EU831582|SESN2|83667|sestrin 2##EU831667|SESN2|83667|sestrin 2	0.0	
chr15	101639571	101639751	reg1033059.p2	4.597	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-180149	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-180187	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-219590	+	AB071402 TSC_hg19_v1_chr15_-_101791795	152075	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	152474	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	178002	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.224171	CTCF.p2:-12:0.224
chr1	65329945	65330125	reg1026542.p2	4.597	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	-119236	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	-393517	+	BC029895 NM_152489	-660546	+	TSC_hg19_v1_chr1_-_65432181 BC062431 BC009079 NM_002227	101979	-	TSC_hg19_v1_chr1_-_65432203 BC111401	102193	-	TSC_hg19_v1_chr1_+_65613263 NM_203464 BC146653 BC016180 AK309057 BC066944 NM_001005353	283326	+	AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_020925|CACHD1|57685|cache domain containing 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##BC062431|JAK1|3716|Janus kinase 1##BC009079|JAK1|3716|Janus kinase 1##NM_002227|JAK1|3716|Janus kinase 1##BC111401|JAK1|3716|Janus kinase 1##NM_203464|AK4|205|adenylate kinase 4##BC146653|AK4|205|adenylate kinase 4##BC016180|AK4|205|adenylate kinase 4##AK309057|AK4|205|adenylate kinase 4##BC066944|AK4|205|adenylate kinase 4##NM_001005353|AK4|205|adenylate kinase 4	0.0	
chr16	87096307	87096402	reg1010391.p1	4.597	+	BC100027 NM_005250	-484240	+	BC113437 BC113439 NM_005251	-495498	+	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	-507582	-	TSC_hg19_v1_chr16_-_87350760 AB528835 AM392822 AM393070	254446	-	TSC_hg19_v1_chr16_-_87350999 BC015536 AK026130 NM_001195124 NM_001195125	254632	-	TSC_hg19_v1_chr16_-_87417364 AY736035 AF428140 BC012748 BC002985 NM_024735	321008	-	BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AM392822|C16orf95|100506581|chromosome 16 open reading frame 95##AM393070|C16orf95|100506581|chromosome 16 open reading frame 95##BC015536|C16orf95|100506581|chromosome 16 open reading frame 95##AK026130|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195124|C16orf95|100506581|chromosome 16 open reading frame 95##NM_001195125|C16orf95|100506581|chromosome 16 open reading frame 95##AY736035|FBXO31|79791|F-box protein 31##AF428140|FBXO31|79791|F-box protein 31##BC012748|FBXO31|79791|F-box protein 31##BC002985|FBXO31|79791|F-box protein 31##NM_024735|FBXO31|79791|F-box protein 31	0.0	
chr2	233951729	233951910	reg1024954.p2	4.597	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-26703	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-26760	+	BC069151 BC107053 NM_005383	-54438	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	208447	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	208504	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	208538	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.0	
chr2	31954883	31955022	reg1031859.p1	4.597	+	EU832809 GQ129244 HQ258121 M74047 EF560740 AK316597 BC112252 BC113641 NM_000348	-148949	-	TSC_hg19_v1_chr2_-_31637599 NM_000379	-317341	-	TSC_hg19_v1_chr2_-_31637569 U39487 D11456 U06117	-317381	-	TSC_hg19_v1_chr2_-_32235713 AF363446 BC018733 NM_001137602 NM_015955	280706	-	TSC_hg19_v1_chr2_-_32235732 AB041018	280776	-	TSC_hg19_v1_chr2_-_32235815 BC070046	280870	-	EU832809|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##GQ129244|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##HQ258121|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##M74047|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##EF560740|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##AK316597|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC112252|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC113641|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000348|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000379|XDH|7498|xanthine dehydrogenase##U39487|XDH|7498|xanthine dehydrogenase##D11456|XDH|7498|xanthine dehydrogenase##U06117|XDH|7498|xanthine dehydrogenase##AF363446|MEMO1|51072|mediator of cell motility 1##BC018733|MEMO1|51072|mediator of cell motility 1##NM_001137602|MEMO1|51072|mediator of cell motility 1##NM_015955|MEMO1|51072|mediator of cell motility 1##AB041018|MEMO1|51072|mediator of cell motility 1##BC070046|MEMO1|51072|mediator of cell motility 1	0.905505	CTCF.p2:-4:0.906
chr9	15529922	15530102	reg1027016.p2	4.597	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-19052	-	AF098483 AF098482 NM_021144	-19765	-	TSC_hg19_v1_chr9_+_15422877 AB527501 EU446705 BC014985	-107100	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	23009	+	TSC_hg19_v1_chr9_-_16727889 AY438376	1197885	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	1340655	-	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2	0.0	
chr1	175307775	175307878	reg1034238.p1	4.596	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-145796	-	AK127044 NM_022093	-270833	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-315255	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	404884	-	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	868339	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	868492	-	D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2	0.0	
chr1	38231804	38231927	reg1039092.p1	4.596	+	AK090974 AX746712 AJ781169 BC067734 NM_001099439 NM_173641	-1052	-	BC041360 TSC_hg19_v1_chr1_-_38218615 AK309089	-13259	-	TSC_hg19_v1_chr1_+_38158195 AK222568 BC016944 AK291917 BC008079 AK022606 AB463480 CU677773	-73590	+	TSC_hg19_v1_chr1_+_38259650 AB188490 BC077730 NM_001031740 NM_001113482	27794	+	AK301399 AK055996 NM_152496	29254	+	TSC_hg19_v1_chr1_+_38273468 NM_001142726 NM_198446	41606	+	AK090974|EPHA10|284656|EPH receptor A10##AJ781169|EPHA10|284656|EPH receptor A10##BC067734|EPHA10|284656|EPH receptor A10##NM_001099439|EPHA10|284656|EPH receptor A10##NM_173641|EPHA10|284656|EPH receptor A10##BC041360|EPHA10|284656|EPH receptor A10##AK309089|EPHA10|284656|EPH receptor A10##AK222568|CDCA8|55143|cell division cycle associated 8##BC016944|CDCA8|55143|cell division cycle associated 8##AK291917|CDCA8|55143|cell division cycle associated 8##BC008079|CDCA8|55143|cell division cycle associated 8##AK022606|CDCA8|55143|cell division cycle associated 8##AB188490|MANEAL|149175|mannosidase, endo-alpha-like##BC077730|MANEAL|149175|mannosidase, endo-alpha-like##NM_001031740|MANEAL|149175|mannosidase, endo-alpha-like##NM_001113482|MANEAL|149175|mannosidase, endo-alpha-like##AK301399|MANEAL|149175|mannosidase, endo-alpha-like##AK055996|MANEAL|149175|mannosidase, endo-alpha-like##NM_152496|MANEAL|149175|mannosidase, endo-alpha-like##NM_001142726|C1orf122|127687|chromosome 1 open reading frame 122##NM_198446|C1orf122|127687|chromosome 1 open reading frame 122	0.323479	CTCF.p2:21:0.323
chr17	49449135	49449221	reg1023973.p1	4.596	+	AF151806 TSC_hg19_v1_chr17_+_49337913 AK314399 BC025276 BC001535	-111253	+	TSC_hg19_v1_chr17_+_49337906 NM_016001	-111279	+	TSC_hg19_v1_chr17_+_49337888 AK026355	-111292	+	TSC_hg19_v1_chr17_-_50235676 AK294652 AK313001	786510	-	TSC_hg19_v1_chr17_-_50236075 BC047456 BC068462	786862	-	CR936674 TSC_hg19_v1_chr17_-_50236127 NM_020178	786960	-	AF151806|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK314399|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC025276|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC001535|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##NM_016001|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK026355|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK294652|CA10|56934|carbonic anhydrase X##AK313001|CA10|56934|carbonic anhydrase X##BC047456|CA10|56934|carbonic anhydrase X##BC068462|CA10|56934|carbonic anhydrase X##NM_020178|CA10|56934|carbonic anhydrase X	0.992892	CTCF.p2:-1:0.993
chr1	7599916	7600001	reg1026468.p1	4.596	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-754467	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-838027	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-838076	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	231418	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	244451	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	244867	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.99459	CTCF.p2:20:0.995
chr17	8795731	8795912	reg1032973.p1	4.596	+	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-24837	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-93269	-	BC146949 BC146966 BC171861 NM_001128076	-133945	-	AY725853 AF128881 NM_014308	19995	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	73160	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	129146	+	BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##BC146949|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC146966|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC171861|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##NM_001128076|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1	0.0	
chr21	43729693	43729806	reg1001595.p3	4.596	+	TSC_hg19_v1_chr21_+_43710190 AF038175	-19536	+	AK298491 AF323664 NM_207174	-89781	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	-90456	+	L08044 DQ891963 DQ895153 L15203 BC017859 TSC_hg19_v1_chr21_-_43735520	5742	-	NM_003226 AF432265	5983	-	X51698 BC032820 NM_005423	41389	-	AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK298491|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323664|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207174|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##L08044|TFF3|7033|trefoil factor 3 (intestinal)##DQ891963|TFF3|7033|trefoil factor 3 (intestinal)##DQ895153|TFF3|7033|trefoil factor 3 (intestinal)##L15203|TFF3|7033|trefoil factor 3 (intestinal)##BC017859|TFF3|7033|trefoil factor 3 (intestinal)##NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2	0.0	
chr3	150511569	150511688	reg1033597.p1	4.596	+	TSC_hg19_v1_chr3_-_150481278 U76248 NM_005067	-30506	-	TSC_hg19_v1_chr3_-_150480936 BC013082	-30698	-	TSC_hg19_v1_chr3_-_150480902 AK223565	-30729	-	AF388366 AF388368 NM_052995	150394	-	AF482697 NM_001195794 NM_174878	179157	-	TSC_hg19_v1_chr3_+_150803504 AK128165	291877	+	U76248|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##NM_005067|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##BC013082|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##AK223565|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##AF388366|CLRN1|7401|clarin 1##AF388368|CLRN1|7401|clarin 1##NM_052995|CLRN1|7401|clarin 1##AF482697|CLRN1|7401|clarin 1##NM_001195794|CLRN1|7401|clarin 1##NM_174878|CLRN1|7401|clarin 1##AK128165|MED12L|116931|mediator complex subunit 12-like	0.838512	CTCF.p2:-4:0.839
chr6	118830291	118830414	reg1029892.p1	4.596	+	BC028615 NM_001029858 BC114925	-601662	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-833686	+	BC110325 TSC_hg19_v1_chr6_+_117996661 BC063794	-833691	+	NM_002667 M63603 AK311799 BC005269	39113	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	142684	-	BC110835 BC064835 NM_001178035	200881	-	BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC110325|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC063794|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like	0.90662	CTCF.p2:4:0.907
chr6	22194520	22194701	reg1026183.p2	4.596	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	-527951	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	-600238	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1659887	+	BC015850 NM_000948	103119	-	X54394 X54393 GQ305133 M58594 NM_001163558	108437	-	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	375115	+	AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1	0.0	
chr8	106918238	106918361	reg1030662.p1	4.596	+	AF119334 BC109222 BC109223 NM_012082	-587153	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-1317052	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-1317124	-	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	364124	+	AK296561 NM_001198532	541852	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	751689	+	AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1	0.996427	CTCF.p2:-8:0.996
chr14	94202879	94202973	reg1031460.p1	4.595	+	AY161004 NM_182971 BC101125 BC101126	-389378	+	AK125327 NM_020818	-403362	+	TSC_hg19_v1_chr14_-_93799376 AK291422 BC141850 BX248762 NM_001002860 NM_018167 BC047071	-403522	-	AY225516 AY225517 NM_178013	51839	-	NM_001207071 NM_138344 AK093387 AX748092	182322	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	190782	+	AY161004|COX8C|341947|cytochrome c oxidase subunit VIIIC##NM_182971|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101125|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101126|COX8C|341947|cytochrome c oxidase subunit VIIIC##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)##AK291422|BTBD7|55727|BTB (POZ) domain containing 7##BC141850|BTBD7|55727|BTB (POZ) domain containing 7##BX248762|BTBD7|55727|BTB (POZ) domain containing 7##NM_001002860|BTBD7|55727|BTB (POZ) domain containing 7##NM_018167|BTBD7|55727|BTB (POZ) domain containing 7##BC047071|BTBD7|55727|BTB (POZ) domain containing 7##AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A	0.0	
chr5	131977312	131977439	reg1026790.p2	4.595	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-84735	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	-98183	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	-150894	-	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	16515	+	NM_000589 NM_172348	31997	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	95842	-	NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A	0.0	
chr9	118286729	118286853	reg1003753.p1	4.595	+	AB022761 NM_017418	-382695	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-406318	-	AK313619 NM_001244 NM_001252290	-593917	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	629279	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	1162671	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	1162815	+	AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32	0.0	
chrX	73755225	73755370	reg1032666.p1	4.595	+	NM_006517 TSC_hg19_v1_chrX_+_73641331 U05315 AB085789	-114051	+	BC021176 NM_203303 TSC_hg19_v1_chrX_+_73524041 EU446947 EU831786 EU831864 CU676854	-231235	+	TSC_hg19_v1_chrX_-_73513379 AK311345	-241923	-	AF155109 TSC_hg19_v1_chrX_-_73834424 BC013357	79120	-	BC002451 TSC_hg19_v1_chrX_-_73834428	79131	-	TSC_hg19_v1_chrX_-_73834444 AK001334	79142	-	NM_006517|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##U05315|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##AB085789|SLC16A2|6567|solute carrier family 16, member 2 (monocarboxylic acid transporter 8)##BC021176|ZCCHC13|389874|zinc finger, CCHC domain containing 13##NM_203303|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU446947|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831786|ZCCHC13|389874|zinc finger, CCHC domain containing 13##EU831864|ZCCHC13|389874|zinc finger, CCHC domain containing 13##AK311345|FTX|100302692|FTX transcript, XIST regulator (non-protein coding)##AF155109|RLIM|51132|ring finger protein, LIM domain interacting##BC013357|RLIM|51132|ring finger protein, LIM domain interacting##AK001334|RLIM|51132|ring finger protein, LIM domain interacting	0.023534	
chr12	26767255	26767371	reg1026244.p1	4.594	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-418728	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-419022	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	-489392	-	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	218767	-	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	323596	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	323917	-	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)	0.017566	
chr19	18230094	18230275	reg1031769.p2	4.594	+	TSC_hg19_v1_chr19_+_18208608 AB527184 NM_015016 AB011133	-21575	+	EU832463 EU832545 BC137404 BC137406 NM_005535 NM_153701 U03187 BC029121 TSC_hg19_v1_chr19_-_18197721 AK225919 AK290423	-32452	-	TSC_hg19_v1_chr19_+_18118978 AF193051 NM_015683 AK000689 AK128588 BC022516 AK314657 AB529119	-111166	+	BC063240 TSC_hg19_v1_chr19_+_18263972	33797	+	TSC_hg19_v1_chr19_+_18264004 BC070082 NM_005027 BC090249	33848	+	NM_006332 TSC_hg19_v1_chr19_+_18284600 AB049659 AK291551	54407	+	NM_015016|MAST3|23031|microtubule associated serine/threonine kinase 3##AB011133|MAST3|23031|microtubule associated serine/threonine kinase 3##EU832463|IL12RB1|3594|interleukin 12 receptor, beta 1##EU832545|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137404|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137406|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_005535|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_153701|IL12RB1|3594|interleukin 12 receptor, beta 1##U03187|IL12RB1|3594|interleukin 12 receptor, beta 1##BC029121|IL12RB1|3594|interleukin 12 receptor, beta 1##AK225919|IL12RB1|3594|interleukin 12 receptor, beta 1##AK290423|IL12RB1|3594|interleukin 12 receptor, beta 1##AF193051|ARRDC2|27106|arrestin domain containing 2##NM_015683|ARRDC2|27106|arrestin domain containing 2##AK000689|ARRDC2|27106|arrestin domain containing 2##AK128588|ARRDC2|27106|arrestin domain containing 2##BC022516|ARRDC2|27106|arrestin domain containing 2##AK314657|ARRDC2|27106|arrestin domain containing 2##BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_006332|IFI30|10437|interferon, gamma-inducible protein 30##AB049659|IFI30|10437|interferon, gamma-inducible protein 30##AK291551|IFI30|10437|interferon, gamma-inducible protein 30	0.0	
chr19	50755721	50755827	reg1028440.p1	4.594	+	BC018933 TSC_hg19_v1_chr19_+_50713879	-41923	+	TSC_hg19_v1_chr19_+_50706878 AY165122 BC129803 NM_001077186 NM_001145809 NM_024729 AK307783 AB290169	-48883	+	TSC_hg19_v1_chr19_+_50691445 AK125082	-64333	+	BC007877 TSC_hg19_v1_chr19_+_50796867	41070	+	AF055989 NM_004977	76859	-	BC085008 BC006149 BC111705 BC040958 BC053864 BC065203 BC032360 AF090387 AF098485 AF200344 AK300884 BC019048 AK310134 TSC_hg19_v1_chr19_-_50848025	92218	-	BC018933|MYH14|79784|myosin, heavy chain 14, non-muscle##AY165122|MYH14|79784|myosin, heavy chain 14, non-muscle##BC129803|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_001077186|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_001145809|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_024729|MYH14|79784|myosin, heavy chain 14, non-muscle##AK307783|MYH14|79784|myosin, heavy chain 14, non-muscle##AB290169|MYH14|79784|myosin, heavy chain 14, non-muscle##AK125082|MYH14|79784|myosin, heavy chain 14, non-muscle##BC007877|MYH14|79784|myosin, heavy chain 14, non-muscle##AF055989|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##NM_004977|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##BC085008|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC006149|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC111705|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC040958|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC053864|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC065203|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC032360|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF090387|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF098485|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF200344|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK300884|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC019048|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK310134|NAPSB|256236|napsin B aspartic peptidase pseudogene	0.996873	CTCF.p2:-12:0.997
chr12	124961513	124961606	reg1029874.p1	4.593	+	AK126577 NM_181709	-187850	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-503830	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-504360	-	TSC_hg19_v1_chr12_-_125002875 BC033087	41300	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	90516	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	386746	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr12	25288947	25289073	reg1030950.p1	4.593	+	TSC_hg19_v1_chr12_+_25205520 BC029391 AK303103 AK303256 BC126417 BC144164 BC144165 BC144170	-83430	+	NM_001204126 NM_001204127 NM_006152	-83830	+	BC035880 NM_001101339 BC046192 BC062789	-138598	-	BC028415 AK297998 AK302235 AK301763 AK093102 AX747924 BC031047 BC047415 BC057795 NM_001082972 NM_001082973 NM_001204101 NM_001204102 NM_018272 AK304602	59053	-	TSC_hg19_v1_chr12_+_25348156 AK057730 NM_001001660	59141	+	AK094491 TSC_hg19_v1_chr12_+_25348215 BC100276 BC071769	59196	+	BC029391|LRMP|4033|lymphoid-restricted membrane protein##AK303103|LRMP|4033|lymphoid-restricted membrane protein##AK303256|LRMP|4033|lymphoid-restricted membrane protein##BC126417|LRMP|4033|lymphoid-restricted membrane protein##BC144164|LRMP|4033|lymphoid-restricted membrane protein##BC144165|LRMP|4033|lymphoid-restricted membrane protein##BC144170|LRMP|4033|lymphoid-restricted membrane protein##NM_001204126|LRMP|4033|lymphoid-restricted membrane protein##NM_001204127|LRMP|4033|lymphoid-restricted membrane protein##NM_006152|LRMP|4033|lymphoid-restricted membrane protein##BC035880|C12orf77|196415|chromosome 12 open reading frame 77##NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77##BC046192|C12orf77|196415|chromosome 12 open reading frame 77##BC062789|C12orf77|196415|chromosome 12 open reading frame 77##BC028415|CASC1|55259|cancer susceptibility candidate 1##AK297998|CASC1|55259|cancer susceptibility candidate 1##AK302235|CASC1|55259|cancer susceptibility candidate 1##AK301763|CASC1|55259|cancer susceptibility candidate 1##AK093102|CASC1|55259|cancer susceptibility candidate 1##BC031047|CASC1|55259|cancer susceptibility candidate 1##BC047415|CASC1|55259|cancer susceptibility candidate 1##BC057795|CASC1|55259|cancer susceptibility candidate 1##NM_001082972|CASC1|55259|cancer susceptibility candidate 1##NM_001082973|CASC1|55259|cancer susceptibility candidate 1##NM_001204101|CASC1|55259|cancer susceptibility candidate 1##NM_001204102|CASC1|55259|cancer susceptibility candidate 1##NM_018272|CASC1|55259|cancer susceptibility candidate 1##AK304602|CASC1|55259|cancer susceptibility candidate 1##AK057730|LYRM5|144363|LYR motif containing 5##NM_001001660|LYRM5|144363|LYR motif containing 5##BC100276|LYRM5|144363|LYR motif containing 5##BC071769|LYRM5|144363|LYR motif containing 5	0.858259	CTCF.p2:-5:0.858
chr16	72691901	72692029	reg1024504.p2	4.593	+	AK122925 NM_001160213	-485617	-	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	-485922	-	NM_001142318	-563751	-	TSC_hg19_v1_chr16_+_72699031 AK021563	7099	+	TSC_hg19_v1_chr16_-_72991733 BC029653	299740	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	390256	-	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001142318|TXNL4B|54957|thioredoxin-like 4B##BC029653|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3	0.0	
chr20	6616999	6617107	reg1027402.p1	4.593	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-512890	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-513176	-	TSC_hg19_v1_chr20_-_6103678 AK314394 BC040545 AF443278	-513379	-	BC069214 NM_001200	131691	+	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	1304049	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	1383247	-	AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AK314394|FERMT1|55612|fermitin family member 1##BC040545|FERMT1|55612|fermitin family member 1##AF443278|FERMT1|55612|fermitin family member 1##BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4	0.97058	CTCF.p2:-4:0.971
chr2	12556827	12556949	reg1029297.p1	4.593	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-670113	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-746597	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-874045	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	300365	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	301028	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	301509	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.991787	CTCF.p2:0:0.992
chr2	164735366	164735500	reg1033917.p1	4.593	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	-142916	-	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-1040186	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-1040309	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	689571	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	742460	-	TSC_hg19_v1_chr2_-_165477987 AK307744 AK313153	742560	-	BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14##AK307744|GRB14|2888|growth factor receptor-bound protein 14##AK313153|GRB14|2888|growth factor receptor-bound protein 14	0.379045	CTCF.p2:-2:0.328
chr3	41737430	41737532	reg1032137.p2	4.593	+	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	-496457	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	-496532	+	TSC_hg19_v1_chr3_+_40566471 BC101619 BC113415 CR749268	-1170981	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	266078	-	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	395352	+	TSC_hg19_v1_chr3_+_42190749 AK294221	453267	+	AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC101619|ZNF621|285268|zinc finger protein 621##BC113415|ZNF621|285268|zinc finger protein 621##CR749268|ZNF621|285268|zinc finger protein 621##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1	0.830069	CTCF.p2:-8:0.830
chr7	158678467	158678556	reg1028316.p2	4.593	+	TSC_hg19_v1_chr7_+_158649248 BC014491 NM_018051 CU677023	-29198	+	TSC_hg19_v1_chr7_-_158622236 AB527334 AY368150 NM_020728	-56251	-	TSC_hg19_v1_chr7_-_158622198 AB033054	-56320	-	BT007118 DQ890571 DQ893732 BC010569 AK310386 L36566 U18810 AK308955 NM_003382 X95097	259044	-	None	None	None	None	None	None	BC014491|WDR60|55112|WD repeat domain 60##NM_018051|WDR60|55112|WD repeat domain 60##AY368150|ESYT2|57488|extended synaptotagmin-like protein 2##NM_020728|ESYT2|57488|extended synaptotagmin-like protein 2##AB033054|ESYT2|57488|extended synaptotagmin-like protein 2##BT007118|VIPR2|7434|vasoactive intestinal peptide receptor 2##DQ890571|VIPR2|7434|vasoactive intestinal peptide receptor 2##DQ893732|VIPR2|7434|vasoactive intestinal peptide receptor 2##BC010569|VIPR2|7434|vasoactive intestinal peptide receptor 2##AK310386|VIPR2|7434|vasoactive intestinal peptide receptor 2##L36566|VIPR2|7434|vasoactive intestinal peptide receptor 2##U18810|VIPR2|7434|vasoactive intestinal peptide receptor 2##AK308955|VIPR2|7434|vasoactive intestinal peptide receptor 2##NM_003382|VIPR2|7434|vasoactive intestinal peptide receptor 2##X95097|VIPR2|7434|vasoactive intestinal peptide receptor 2	0.940774	CTCF.p2:3:0.941
chr10	100550709	100550849	reg1031059.p1	4.592	+	TSC_hg19_v1_chr10_-_100206705 NM_000195 NM_182639	-344068	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	-344104	-	BC002514 TSC_hg19_v1_chr10_-_100206650	-344133	-	AJ299720 AK094037 BC112356 AF282885 AF282886 AF282887 AJ299719 AK314759 NM_001166244 NM_001166245 NM_001166246 NM_021828	444815	-	TSC_hg19_v1_chr10_+_101088794 NM_020348	538045	+	TSC_hg19_v1_chr10_+_101089114 AK308618	538347	+	NM_000195|HPS1|3257|Hermansky-Pudlak syndrome 1##NM_182639|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1##AJ299720|HPSE2|60495|heparanase 2##AK094037|HPSE2|60495|heparanase 2##BC112356|HPSE2|60495|heparanase 2##AF282885|HPSE2|60495|heparanase 2##AF282886|HPSE2|60495|heparanase 2##AF282887|HPSE2|60495|heparanase 2##AJ299719|HPSE2|60495|heparanase 2##AK314759|HPSE2|60495|heparanase 2##NM_001166244|HPSE2|60495|heparanase 2##NM_001166245|HPSE2|60495|heparanase 2##NM_001166246|HPSE2|60495|heparanase 2##NM_021828|HPSE2|60495|heparanase 2##NM_020348|CNNM1|26507|cyclin M1##AK308618|CNNM1|26507|cyclin M1	0.999424	CTCF.p2:5:0.999
chr11	130908601	130908700	reg1026246.p1	4.592	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-122262	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-122305	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-589988	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	331819	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	871974	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	872689	+	NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin	0.0	
chr17	70117202	70117335	reg1027503.p3	4.592	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-28	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-98	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-109	+	AK000477 TSC_hg19_v1_chr17_-_70588944	471675	-	AF331643 TSC_hg19_v1_chr17_-_71088816	971548	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	971555	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr3	180996628	180996734	reg1027045.p2	4.592	+	NM_001190233 TSC_hg19_v1_chr3_-_180707525 AK311765 BC073989 BC009702 AK309019 AK307097 NM_145261	-289248	-	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	-366203	+	TSC_hg19_v1_chr3_+_180630246 NM_001013438 NM_001013439 NM_005087	-366498	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	420711	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	433032	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	433457	+	NM_001190233|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK311765|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC073989|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC009702|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK307097|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##NM_145261|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013438|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013439|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_005087|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2	0.527299	CTCF.p2:-5:0.527
chr5	71772679	71772833	reg1032871.p1	4.592	+	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-156534	+	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	-156554	+	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	-156676	-	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	30427	-	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	339734	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	371185	+	BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1	0.034565	
chr6	107976564	107976690	reg1028402.p1	4.592	+	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	-165199	+	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	-195897	-	BC131628 NM_001080450	-540992	-	AK303562 AK074125 TSC_hg19_v1_chr6_-_108145518 AK093571 AX748208 NM_198081	168889	-	AF100141 CU690382 CU690568 BC001153 TSC_hg19_v1_chr6_-_108279282 AK074835	302630	-	TSC_hg19_v1_chr6_-_108279316 AJ011779	302685	-	NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AK303562|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK074125|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK093571|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_198081|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)##AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)	0.92222	CTCF.p2:27:0.922
chr8	22551836	22551927	reg1023408.p2	4.592	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-1097	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-1376	-	AK294968 AK295834 NM_001199881	-1807	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	233443	-	AK092617 BC034917 NM_001160036	293042	+	NM_001160037	301479	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.943231	CTCF.p2:13:0.943
chr9	129622633	129622763	reg1028444.p2	4.592	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	-55388	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	-245937	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-533531	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	246	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	54406	+	AF221098 NM_001190728 AB385313 CU689706	101837	+	NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AF221098|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190728|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	0.999409	CTCF.p2:-27:0.999
chr1	168704337	168704458	reg1031571.p1	4.591	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	-5968	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-158605	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	-191180	-	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	371572	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	632695	-	NM_003666 AF288161 U79751 AK223533	632826	+	DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_003666|BLZF1|8548|basic leucine zipper nuclear factor 1##AF288161|BLZF1|8548|basic leucine zipper nuclear factor 1##U79751|BLZF1|8548|basic leucine zipper nuclear factor 1##AK223533|BLZF1|8548|basic leucine zipper nuclear factor 1	0.857707	CTCF.p2:-22:0.858
chr15	102118923	102119011	reg1029846.p1	4.591	+	TSC_hg19_v1_chr15_-_102030140 NM_002570 NM_138319 NM_138320 NM_138321 NM_138322 NM_138323 NM_138324 NM_138325	-88805	-	TSC_hg19_v1_chr15_-_102029995 M80482 M80482	-88934	-	TSC_hg19_v1_chr15_-_102029982 D87993 D87994 D87995	-89012	-	TSC_hg19_v1_chr15_-_102192580 BC006150 BC008873 AF353992 AK315584 AK297048 AK026257 AK296553 NM_025141 NM_078474	73499	-	TSC_hg19_v1_chr15_-_102264638 BC132671 BC136315 BC143943 AK056653 AX721055 NM_152334	145688	-	BC137002 BC137003 NM_001005326	226944	+	NM_002570|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138319|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138320|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138321|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138322|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138323|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138324|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138325|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87993|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87994|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87995|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##BC006150|TM2D3|80213|TM2 domain containing 3##BC008873|TM2D3|80213|TM2 domain containing 3##AF353992|TM2D3|80213|TM2 domain containing 3##AK315584|TM2D3|80213|TM2 domain containing 3##AK297048|TM2D3|80213|TM2 domain containing 3##AK026257|TM2D3|80213|TM2 domain containing 3##AK296553|TM2D3|80213|TM2 domain containing 3##NM_025141|TM2D3|80213|TM2 domain containing 3##NM_078474|TM2D3|80213|TM2 domain containing 3##BC132671|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC136315|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC143943|TARSL2|123283|threonyl-tRNA synthetase-like 2##AK056653|TARSL2|123283|threonyl-tRNA synthetase-like 2##NM_152334|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	0.0	
chr22	37270134	37270315	reg1012206.p2	4.591	+	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	-13116	+	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	-54705	-	AL022729 TSC_hg19_v1_chr22_-_37172162 AK307105 AK307382 BC000566 AB209424 NM_001177701 NM_006860	-98069	-	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	39434	+	BC042635 CR456416 NM_001163857 NM_178552	133633	-	D87292 TSC_hg19_v1_chr22_-_37415489 AK091874 BC010148 AK000862 AK223521 AK301300 NM_003312	145257	-	BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##AL022729|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307105|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307382|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC000566|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AB209424|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177701|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_006860|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##BC042635|C22orf33|339669|chromosome 22 open reading frame 33##CR456416|C22orf33|339669|chromosome 22 open reading frame 33##NM_001163857|C22orf33|339669|chromosome 22 open reading frame 33##NM_178552|C22orf33|339669|chromosome 22 open reading frame 33##D87292|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK091874|TST|7263|thiosulfate sulfurtransferase (rhodanese)##BC010148|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK000862|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK223521|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK301300|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_003312|TST|7263|thiosulfate sulfurtransferase (rhodanese)	0.0	
chr5	13479100	13479231	reg1032922.p1	4.591	+	TSC_hg19_v1_chr5_-_11904184 AK296232	-1574981	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	-1575129	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	-2717766	-	AX800026 AY045575 NM_001369	465423	-	AY050643 TSC_hg19_v1_chr5_-_14011873	532705	-	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	664507	+	AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_004394|DAP|1611|death-associated protein##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)	0.137573	
chr7	82201791	82201971	reg1001742.p2	4.591	+	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	-128801	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	-129035	-	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-802507	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	589988	-	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	590355	-	AK303925 NM_001178129	1068865	-	NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	0.0	
chr7	87799178	87799296	reg1028711.p2	4.591	+	TSC_hg19_v1_chr7_+_87563605 BC036029 BC092465 NM_004194 NM_016351 NM_021721 NM_021722 NM_021723 AK291010 BC062433 BC125118 BC125117 AF073291 AF155381 AF155382	-235654	+	AK302010 TSC_hg19_v1_chr7_+_87505937 BC022811 CU690272	-293257	+	BC036045 TSC_hg19_v1_chr7_+_87505839 AK292569 AF160249 BC014909 AF160876 BC035632 AK303175 BC047693	-293433	+	AB464235 L12387 TSC_hg19_v1_chr7_-_87849352 AK295225 BC011025 M32886	50115	-	TSC_hg19_v1_chr7_-_87849391 AK129770 AK310366 NM_003130	50168	-	TSC_hg19_v1_chr7_-_87856292 AK296601 NM_198901	57057	-	BC036029|ADAM22|53616|ADAM metallopeptidase domain 22##BC092465|ADAM22|53616|ADAM metallopeptidase domain 22##NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22##NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22##AK291010|ADAM22|53616|ADAM metallopeptidase domain 22##BC062433|ADAM22|53616|ADAM metallopeptidase domain 22##BC125118|ADAM22|53616|ADAM metallopeptidase domain 22##BC125117|ADAM22|53616|ADAM metallopeptidase domain 22##AF073291|ADAM22|53616|ADAM metallopeptidase domain 22##AF155381|ADAM22|53616|ADAM metallopeptidase domain 22##AF155382|ADAM22|53616|ADAM metallopeptidase domain 22##AK302010|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC022811|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC036045|DBF4|10926|DBF4 homolog (S. cerevisiae)##AK292569|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF160249|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC014909|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF160876|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC035632|DBF4|10926|DBF4 homolog (S. cerevisiae)##AK303175|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC047693|DBF4|10926|DBF4 homolog (S. cerevisiae)##L12387|SRI|6717|sorcin##AK295225|SRI|6717|sorcin##BC011025|SRI|6717|sorcin##M32886|SRI|6717|sorcin##AK129770|SRI|6717|sorcin##AK310366|SRI|6717|sorcin##NM_003130|SRI|6717|sorcin##AK296601|SRI|6717|sorcin##NM_198901|SRI|6717|sorcin	0.942826	CTCF.p2:-4:0.943
chr9	104473759	104473886	reg1031242.p1	4.591	+	AF085237 AF145026 BC066299 AK057524 AK302547 AF400667 BC030595 NM_147180 AK310471	-116570	-	TSC_hg19_v1_chr9_+_104296175 AK314401	-177652	+	TSC_hg19_v1_chr9_+_104296143 BC016691 BC063115	-177675	+	TSC_hg19_v1_chr9_-_104500218 AB385519 AF416558 AJ416950	26423	-	AB075853 BC167432 NM_133445 TSC_hg19_v1_chr9_-_104500930	27079	-	BC058038 NM_001340 AK313349 BC114547 Z46788	1283805	+	AF085237|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF145026|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC066299|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AK057524|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF400667|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC030595|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##NM_147180|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AK314401|RNF20|56254|ring finger protein 20##BC016691|RNF20|56254|ring finger protein 20##BC063115|RNF20|56254|ring finger protein 20##AF416558|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AJ416950|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AB075853|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##BC167432|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##NM_133445|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##BC058038|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##NM_001340|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##AK313349|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##BC114547|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2##Z46788|CYLC2|1539|cylicin, basic protein of sperm head cytoskeleton 2	0.97621	CTCF.p2:-10:0.955
chr1	235012183	235012270	reg1021934.p1	4.590	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-116452	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-266980	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-268368	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	279863	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	280005	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	312337	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.861716	CTCF.p2:-56:0.862
chr12	7527268	7527392	reg1029637.p1	4.590	+	NM_001080454	-70403	+	BC010621 X84899 NM_000319 U19721 AB527550 DQ891142 DQ894321 CU679763	-184366	+	TSC_hg19_v1_chr12_+_7342306 Z48054 AK299105 NM_001131023 NM_001131024 NM_001131025 AK302742 AK225126 AK312317 AK316250 AK303515	-184976	+	GQ397482 AY358856 AK303372 AF264014 NM_174941 BC104962 BC104964	69407	-	DQ058615 TSC_hg19_v1_chr12_-_7656374 BC051281 AK226017 Z22968 Z22969 Z22970 Z22971 NM_004244 NM_203416	129020	-	U72890 L25877 U72891 BC101405 BC101404 BC101972 BC096158 BC096159 BC096160 BC096161 BC101973 BC144708 NM_001644	291154	-	NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4##BC010621|PEX5|5830|peroxisomal biogenesis factor 5##X84899|PEX5|5830|peroxisomal biogenesis factor 5##NM_000319|PEX5|5830|peroxisomal biogenesis factor 5##U19721|PEX5|5830|peroxisomal biogenesis factor 5##DQ891142|PEX5|5830|peroxisomal biogenesis factor 5##DQ894321|PEX5|5830|peroxisomal biogenesis factor 5##Z48054|PEX5|5830|peroxisomal biogenesis factor 5##AK299105|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131023|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131024|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131025|PEX5|5830|peroxisomal biogenesis factor 5##AK302742|PEX5|5830|peroxisomal biogenesis factor 5##AK225126|PEX5|5830|peroxisomal biogenesis factor 5##AK312317|PEX5|5830|peroxisomal biogenesis factor 5##AK316250|PEX5|5830|peroxisomal biogenesis factor 5##AK303515|PEX5|5830|peroxisomal biogenesis factor 5##GQ397482|CD163L1|283316|CD163 molecule-like 1##AK303372|CD163L1|283316|CD163 molecule-like 1##AF264014|CD163L1|283316|CD163 molecule-like 1##NM_174941|CD163L1|283316|CD163 molecule-like 1##BC104962|CD163L1|283316|CD163 molecule-like 1##BC104964|CD163L1|283316|CD163 molecule-like 1##DQ058615|CD163|9332|CD163 molecule##BC051281|CD163|9332|CD163 molecule##AK226017|CD163|9332|CD163 molecule##Z22968|CD163|9332|CD163 molecule##Z22969|CD163|9332|CD163 molecule##Z22970|CD163|9332|CD163 molecule##Z22971|CD163|9332|CD163 molecule##NM_004244|CD163|9332|CD163 molecule##NM_203416|CD163|9332|CD163 molecule##U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1	0.078735	
chr17	25905814	25905994	reg1030204.p1	4.590	+	BC035488 BC042106 NM_014238	-106875	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-284623	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-284782	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	52264	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	52299	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	52324	+	BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.0	
chr2	105911505	105911610	reg1029018.p2	4.590	+	BC066879 BC066880 BC067455 NM_007227 CU688176 EU883573	-53300	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	-257043	+	TSC_hg19_v1_chr2_+_105471877 NM_006236	-439659	+	TSC_hg19_v1_chr2_-_105946156 BC020548 BC010093 NM_001142621 NM_004257	34595	-	AK304268 TSC_hg19_v1_chr2_+_105953980 AK307891	42353	+	TSC_hg19_v1_chr2_+_105954010 AK127661 BC001310 NM_024093 DQ891212 DQ894395	42467	+	BC066879|GPR45|11250|G protein-coupled receptor 45##BC066880|GPR45|11250|G protein-coupled receptor 45##BC067455|GPR45|11250|G protein-coupled receptor 45##NM_007227|GPR45|11250|G protein-coupled receptor 45##EU883573|GPR45|11250|G protein-coupled receptor 45##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9##NM_006236|POU3F3|5455|POU class 3 homeobox 3##BC020548|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_001142621|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_004257|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##AK304268|C2orf49|79074|chromosome 2 open reading frame 49##AK307891|C2orf49|79074|chromosome 2 open reading frame 49##AK127661|C2orf49|79074|chromosome 2 open reading frame 49##BC001310|C2orf49|79074|chromosome 2 open reading frame 49##NM_024093|C2orf49|79074|chromosome 2 open reading frame 49##DQ891212|C2orf49|79074|chromosome 2 open reading frame 49##DQ894395|C2orf49|79074|chromosome 2 open reading frame 49	0.98096	CTCF.p2:-16:0.981
chr2	202101378	202101558	reg1006351.p2	4.590	+	NM_001080124 NM_001228 NM_033355 NM_033358 AF422927 AF422928 BC010390 AK310630 BC017031 U60520 X98176	-3243	+	TSC_hg19_v1_chr2_+_202047863 AK310746 U86214 AK304859 AK225475 AY690601 BC042844 U60519 AJ487678 AJ487679	-53608	+	NM_001206524 NM_001206542 NM_001230 NM_032974 NM_032976 NM_032977	-53848	+	NM_001080125 AF422926 BC068050 AF422925 AF422929 X98172 AY429525	21329	+	NM_033356 X98173	23788	+	AK124115 BC031603 NM_001127391 NM_139163 AK292283	120625	-	NM_001080124|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001228|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033355|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033358|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422927|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422928|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC010390|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310630|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC017031|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##U60520|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98176|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001080125|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422926|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC068050|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422929|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98172|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033356|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98173|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK124115|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##BC031603|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_001127391|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_139163|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##AK292283|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12	0.0	
chr2	48134108	48134238	reg1029130.p2	4.590	+	BC130445 BC136480 AK292877 AF176706 AF174599 AK223592 BC043258 AY827075 TSC_hg19_v1_chr2_-_48132864 AK297444 NM_001190274	-1380	-	AK304140 AK315108 NM_025133	-18322	-	BC071594 NM_000179 TSC_hg19_v1_chr2_+_48010283 U28946 D89646 BC104665 U54777 BC004246 AK293921 AK308392 AB590153 DQ892898	-123877	+	TSC_hg19_v1_chr2_+_48541851 NM_002158 BC063305	407645	+	AY134855 NM_001135629 NM_001193475 NM_152994 TSC_hg19_v1_chr2_+_48667936 AK172762 AK122900 AY092062 BC111059 AK307755 BC117279 BC143466 BC143463 BC040721	533799	+	AK309740 NM_001198593 TSC_hg19_v1_chr2_+_48757177	622948	+	BC130445|FBXO11|80204|F-box protein 11##BC136480|FBXO11|80204|F-box protein 11##AK292877|FBXO11|80204|F-box protein 11##AF176706|FBXO11|80204|F-box protein 11##AF174599|FBXO11|80204|F-box protein 11##AK223592|FBXO11|80204|F-box protein 11##BC043258|FBXO11|80204|F-box protein 11##AY827075|FBXO11|80204|F-box protein 11##AK297444|FBXO11|80204|F-box protein 11##NM_001190274|FBXO11|80204|F-box protein 11##AK304140|FBXO11|80204|F-box protein 11##AK315108|FBXO11|80204|F-box protein 11##NM_025133|FBXO11|80204|F-box protein 11##BC071594|MSH6|2956|mutS homolog 6 (E. coli)##NM_000179|MSH6|2956|mutS homolog 6 (E. coli)##U28946|MSH6|2956|mutS homolog 6 (E. coli)##D89646|MSH6|2956|mutS homolog 6 (E. coli)##BC104665|MSH6|2956|mutS homolog 6 (E. coli)##U54777|MSH6|2956|mutS homolog 6 (E. coli)##BC004246|MSH6|2956|mutS homolog 6 (E. coli)##AK293921|MSH6|2956|mutS homolog 6 (E. coli)##AK308392|MSH6|2956|mutS homolog 6 (E. coli)##DQ892898|MSH6|2956|mutS homolog 6 (E. coli)##NM_002158|FOXN2|3344|forkhead box N2##BC063305|FOXN2|3344|forkhead box N2##AY134855|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_001135629|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_001193475|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_152994|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK172762|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK122900|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AY092062|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC111059|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK307755|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC117279|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC143466|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC143463|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC040721|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	0.0	
chr2	96830586	96830766	reg1017278.p3	4.590	+	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	-19517	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	-19722	-	BC107126 AJ537600 BC107127 NM_001002036	-26503	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	43379	-	TSC_hg19_v1_chr2_+_96874144 AK311432	43478	+	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	43858	-	BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.061614	
chr4	33091560	33091689	reg1035366.p1	4.590	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-2369165	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-2369430	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-2369625	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	3154413	-	AK131492 NM_001136536 AK304357 AK316523	3191622	+	BC157885 NM_001170700	3194019	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.071061	
chr6	100016524	100016650	reg1029580.p1	4.590	+	CU679631 CU691126 AB528579 AB125137 BC050726 TSC_hg19_v1_chr6_-_100016505 AK223247 M74091 AK291914 AK222768 BC026272 BC030159 BC056153	-130	-	TSC_hg19_v1_chr6_+_99968921 BX647075 NM_001195131	-47688	+	TSC_hg19_v1_chr6_-_99963309 BC005991	-53277	-	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	16	-	AY004253 NM_021620	38062	+	AK123634 NM_001040179 NM_032503 AF347063	425523	-	AB125137|CCNC|892|cyclin C##BC050726|CCNC|892|cyclin C##AK223247|CCNC|892|cyclin C##M74091|CCNC|892|cyclin C##AK291914|CCNC|892|cyclin C##AK222768|CCNC|892|cyclin C##BC026272|CCNC|892|cyclin C##BC030159|CCNC|892|cyclin C##BC056153|CCNC|892|cyclin C##BX647075|LOC100130890|100130890|uncharacterized LOC100130890##NM_001195131|LOC100130890|100130890|uncharacterized LOC100130890##BC005991|USP45|85015|ubiquitin specific peptidase 45##BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2	0.0	
chr6	44046799	44046979	reg1003136.p1	4.590	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	-78515	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-308019	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-308355	+	CR627460 TSC_hg19_v1_chr6_+_44094741	47809	+	TSC_hg19_v1_chr6_-_44095161 AK312086	48271	-	TSC_hg19_v1_chr6_-_44095190 NM_032111	48309	-	BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14##NM_032111|MRPL14|64928|mitochondrial ribosomal protein L14	0.0	
chr9	5494296	5494460	reg1037643.p2	4.590	+	TSC_hg19_v1_chr9_+_5450455 NM_014143 DQ836393 AK300470 AK314567 AF233516 BC069381	-43871	+	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	-56498	-	X00949 DQ893302 DQ896468 BC005956 NM_006911	-154570	-	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	16285	+	TSC_hg19_v1_chr9_+_5629121 NM_001135920 NM_001206557 NM_020829	134749	+	BC036853 TSC_hg19_v1_chr9_-_5630098	135712	-	NM_014143|CD274|29126|CD274 molecule##DQ836393|CD274|29126|CD274 molecule##AK300470|CD274|29126|CD274 molecule##AK314567|CD274|29126|CD274 molecule##AF233516|CD274|29126|CD274 molecule##BC069381|CD274|29126|CD274 molecule##BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46##X00949|RLN1|6013|relaxin 1##DQ893302|RLN1|6013|relaxin 1##DQ896468|RLN1|6013|relaxin 1##BC005956|RLN1|6013|relaxin 1##NM_006911|RLN1|6013|relaxin 1##AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_001135920|KIAA1432|57589|KIAA1432##NM_001206557|KIAA1432|57589|KIAA1432##NM_020829|KIAA1432|57589|KIAA1432##BC036853|C9orf46|55848|chromosome 9 open reading frame 46	0.0	
chrX	109644511	109644623	reg1027574.p1	4.590	+	TSC_hg19_v1_chrX_-_109561428 AJ007014	-83121	-	TSC_hg19_v1_chrX_-_109561314 BX648797 NM_001025580 NM_015365	-83221	-	CU687440 TSC_hg19_v1_chrX_-_109561311 AK314596 BC060813	-83262	-	AB037739 AY121804 NM_020769	17717	+	AK091430 NM_001171689	38891	-	BC002909 AK293106 AK297563 AK312270 NM_145234	394466	-	AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BX648797|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001025580|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_015365|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AK314596|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC060813|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AB037739|RGAG1|57529|retrotransposon gag domain containing 1##AY121804|RGAG1|57529|retrotransposon gag domain containing 1##NM_020769|RGAG1|57529|retrotransposon gag domain containing 1##AK091430|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001171689|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC002909|CHRDL1|91851|chordin-like 1##AK293106|CHRDL1|91851|chordin-like 1##AK297563|CHRDL1|91851|chordin-like 1##AK312270|CHRDL1|91851|chordin-like 1##NM_145234|CHRDL1|91851|chordin-like 1	0.092578	
chr11	76824705	76824804	reg1031379.p1	4.589	+	CU686775 BC069115 BC069365 NM_006189	-10870	+	TSC_hg19_v1_chr11_+_76778017 BC018123 NM_004055 AK128124 AK313132 AK310978 AK094150 AB209087	-46727	+	NM_138706 AK127544 AK292773 TSC_hg19_v1_chr11_+_76745441 AK313682 AK172863 BC103908 BC103909 BC103910	-79295	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	14574	+	TSC_hg19_v1_chr11_+_76883833 BC023212	59094	+	AY313782 AY326450 NM_182833	173708	-	BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein##BC018123|CAPN5|726|calpain 5##NM_004055|CAPN5|726|calpain 5##AK128124|CAPN5|726|calpain 5##AK313132|CAPN5|726|calpain 5##AK310978|CAPN5|726|calpain 5##AK094150|CAPN5|726|calpain 5##AB209087|CAPN5|726|calpain 5##NM_138706|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK127544|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK292773|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK313682|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##AK172863|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103908|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103909|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##BC103910|B3GNT6|192134|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA##BC023212|MYO7A|4647|myosin VIIA##AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4	0.974844	CTCF.p2:-5:0.975
chr12	115895251	115895377	reg1031847.p1	4.589	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-773174	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1049096	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1051390	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	819636	-	TSC_hg19_v1_chr12_-_116715263 AY338463	819846	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	1075915	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.0	
chr17	73585258	73585357	reg1015750.p1	4.589	+	AF418286 AF418287 AF418288 AF418289 AF418290 AF418291 TSC_hg19_v1_chr17_+_73584199	-1132	+	TSC_hg19_v1_chr17_+_73553885 AK126687	-31422	+	TSC_hg19_v1_chr17_+_73521798 NM_001015002 NM_001031803 NM_004524 BC010879 BC006503 X87342 BC067840 BC064994 BC080595	-63511	+	AK074680 TSC_hg19_v1_chr17_+_73585572	255	+	TSC_hg19_v1_chr17_+_73598147 BC033247	12904	+	BC027861 NM_001162995	44206	+	AF418286|MYO15B|80022|myosin XVB pseudogene##AF418287|MYO15B|80022|myosin XVB pseudogene##AF418288|MYO15B|80022|myosin XVB pseudogene##AF418289|MYO15B|80022|myosin XVB pseudogene##AF418290|MYO15B|80022|myosin XVB pseudogene##AF418291|MYO15B|80022|myosin XVB pseudogene##AK126687|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_001015002|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_001031803|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_004524|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC010879|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC006503|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##X87342|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC067840|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC064994|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##AK074680|MYO15B|80022|myosin XVB pseudogene##BC033247|MYO15B|80022|myosin XVB pseudogene##BC027861|C17orf109|643008|chromosome 17 open reading frame 109##NM_001162995|C17orf109|643008|chromosome 17 open reading frame 109	0.930694	CTCF.p2:4:0.931
chr19	2543687	2543826	reg1027393.p1	4.589	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-67518	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-86796	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-86820	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	158939	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	158986	-	AK124445 TSC_hg19_v1_chr19_-_2717420	173593	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr4	100768686	100768777	reg1030582.p2	4.589	+	NM_014395 AF186022 AF163254 AF161551 AK301355 AF178987 BC012924 AB528911 DQ893576 DQ894665	-30706	+	TSC_hg19_v1_chr4_+_100495977 AK225328 BC062696 X59657 AK290793 BC125110 BC125111 X75500 X91148	-272724	+	AK302602 NM_000253	-283492	+	AF130115 TSC_hg19_v1_chr4_-_100815585 AK311755 BC110402 BC005340 AK223311 AF201947 BC026245	46844	-	TSC_hg19_v1_chr4_-_100815667 NM_001243736 NM_021970	46953	-	HQ257892 TSC_hg19_v1_chr4_-_100867740 AY358272 BX537609 AL833412 BC022248	99023	-	NM_014395|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF186022|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF163254|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF161551|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AK301355|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AF178987|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##BC012924|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##DQ893576|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##DQ894665|DAPP1|27071|dual adaptor of phosphotyrosine and 3-phosphoinositides##AK225328|MTTP|4547|microsomal triglyceride transfer protein##BC062696|MTTP|4547|microsomal triglyceride transfer protein##X59657|MTTP|4547|microsomal triglyceride transfer protein##AK290793|MTTP|4547|microsomal triglyceride transfer protein##BC125110|MTTP|4547|microsomal triglyceride transfer protein##BC125111|MTTP|4547|microsomal triglyceride transfer protein##X75500|MTTP|4547|microsomal triglyceride transfer protein##X91148|MTTP|4547|microsomal triglyceride transfer protein##AK302602|MTTP|4547|microsomal triglyceride transfer protein##NM_000253|MTTP|4547|microsomal triglyceride transfer protein##AF130115|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##AK311755|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC110402|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC005340|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##AK223311|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##AF201947|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##BC026245|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##NM_001243736|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##NM_021970|LAMTOR3|8649|late endosomal/lysosomal adaptor, MAPK and MTOR activator 3##HQ257892|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##AY358272|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##BX537609|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##AL833412|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14##BC022248|DNAJB14|79982|DnaJ (Hsp40) homolog, subfamily B, member 14	0.0	
chr6	15893933	15894060	reg1031918.p1	4.589	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-230706	-	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	-230819	-	TSC_hg19_v1_chr6_+_15249113 AK303610	-644883	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	235306	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	235441	+	TSC_hg19_v1_chr6_+_16143281 AK026739	249314	+	NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein	0.988396	CTCF.p2:5:0.988
chr6	37271841	37271927	reg1028827.p1	4.589	+	TSC_hg19_v1_chr6_+_37252169 BC063523	-19694	+	TSC_hg19_v1_chr6_-_37225916 BC009625 NM_001162900	-45957	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	-46285	+	TSC_hg19_v1_chr6_+_37321758 NM_003958 NM_183078	49874	+	TSC_hg19_v1_chr6_+_37321801 BC007517	49924	+	TSC_hg19_v1_chr6_+_37321829 AB014546 AK222765 AK298319 AK022075 AK308840 AF334675 BT007446 CU675685 DQ890737 DQ893909	49997	+	BC063523|TBC1D22B|55633|TBC1 domain family, member 22B##BC009625|TMEM217|221468|transmembrane protein 217##NM_001162900|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B##NM_003958|RNF8|9025|ring finger protein 8##NM_183078|RNF8|9025|ring finger protein 8##BC007517|RNF8|9025|ring finger protein 8##AB014546|RNF8|9025|ring finger protein 8##AK222765|RNF8|9025|ring finger protein 8##AK298319|RNF8|9025|ring finger protein 8##AK022075|RNF8|9025|ring finger protein 8##AK308840|RNF8|9025|ring finger protein 8##AF334675|RNF8|9025|ring finger protein 8##BT007446|RNF8|9025|ring finger protein 8##DQ890737|RNF8|9025|ring finger protein 8##DQ893909|RNF8|9025|ring finger protein 8	0.994714	CTCF.p2:-7:0.995
chr10	97551431	97551578	reg1027962.p1	4.588	+	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	-35964	+	AJ133133 AJ133134 NM_001098175	-79969	+	BC068449 DQ278872 NM_001143973 NM_015631	-97605	-	AK294399 NM_001130446	116217	+	NM_001001732 NM_001159747 AK302377 BC075861	208360	+	TSC_hg19_v1_chr10_+_97803318 BC043175 NM_001134375 NM_001134376 NM_019084 AK092360 AK297264 AX747499	251877	+	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##BC068449|TCTN3|26123|tectonic family member 3##DQ278872|TCTN3|26123|tectonic family member 3##NM_001143973|TCTN3|26123|tectonic family member 3##NM_015631|TCTN3|26123|tectonic family member 3##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B##NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC043175|CCNJ|54619|cyclin J##NM_001134375|CCNJ|54619|cyclin J##NM_001134376|CCNJ|54619|cyclin J##NM_019084|CCNJ|54619|cyclin J##AK092360|CCNJ|54619|cyclin J##AK297264|CCNJ|54619|cyclin J	0.010215	
chr11	69066049	69066212	reg1030280.p2	4.588	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	-4508	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-208604	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-249704	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	389726	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	389780	+	BC000076 BC001501 BC014078 TSC_hg19_v1_chr11_+_69455939 M73554 BC023620	389820	+	AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1##BC000076|CCND1|595|cyclin D1##BC001501|CCND1|595|cyclin D1##BC014078|CCND1|595|cyclin D1##M73554|CCND1|595|cyclin D1##BC023620|CCND1|595|cyclin D1	0.031273	
chr12	61976611	61976728	reg1031539.p2	4.588	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	-1893530	+	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	-1986752	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-2662367	-	BC050347 NM_178539	609914	-	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	677515	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	883910	+	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)	0.0	
chr14	42394718	42394843	reg1029073.p1	4.588	+	NM_152447 AK096627	-318013	+	BC053537 BC068566 BC030611 NM_203301	-2493119	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-2493423	-	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	2581695	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	2971718	+	BC121009 BC121010 TSC_hg19_v1_chr14_-_45431102	3036316	-	NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28##BC121009|KLHL28|54813|kelch-like 28 (Drosophila)##BC121010|KLHL28|54813|kelch-like 28 (Drosophila)	0.891677	CTCF.p2:14:0.892
chr14	50443959	50444140	reg1031236.p1	4.588	+	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-83643	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-84216	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	-84231	+	AK091232 AX746864 NM_001012706	30188	-	AF390030 NM_001014830	115311	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	139221	-	AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6##AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D	0.0	
chr14	62584112	62584276	reg1034598.p1	4.588	+	TSC_hg19_v1_chr14_+_62584125 BX248751	-36	+	AJ617628 NM_031914 BC117363 BC143598 HQ258344 AB102949	-121556	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	-355075	+	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	927735	-	AK074484 NM_172376	984389	-	NM_020663 AF087862 AK027351 AK027278 BC062575 AB209218 AF309563	1086987	+	BX248751|FLJ43390|646113|uncharacterized LOC646113##AJ617628|SYT16|83851|synaptotagmin XVI##NM_031914|SYT16|83851|synaptotagmin XVI##BC117363|SYT16|83851|synaptotagmin XVI##BC143598|SYT16|83851|synaptotagmin XVI##HQ258344|SYT16|83851|synaptotagmin XVI##AB102949|SYT16|83851|synaptotagmin XVI##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AK074484|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172376|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_020663|RHOJ|57381|ras homolog gene family, member J##AF087862|RHOJ|57381|ras homolog gene family, member J##AK027351|RHOJ|57381|ras homolog gene family, member J##AK027278|RHOJ|57381|ras homolog gene family, member J##BC062575|RHOJ|57381|ras homolog gene family, member J##AB209218|RHOJ|57381|ras homolog gene family, member J##AF309563|RHOJ|57381|ras homolog gene family, member J	0.0	
chr2	158366432	158366535	reg1029850.p1	4.588	+	L06633 AB528875 CU690346 AF068836 BC036449 TSC_hg19_v1_chr2_-_158300602 AK312753 NM_004288	-65919	-	NM_001009959 AK296477	-182327	-	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	-184199	-	TSC_hg19_v1_chr2_-_158454049 AF525679 NM_001111031	87592	-	AB590288 CU692676 DQ895570 EU176205 AF525680 AF525681 AY127050 TSC_hg19_v1_chr2_-_158485239	118715	-	BC022530 NM_001111032 NM_001111033 NM_145259 TSC_hg19_v1_chr2_-_158485400	118914	-	L06633|CYTIP|9595|cytohesin 1 interacting protein##AF068836|CYTIP|9595|cytohesin 1 interacting protein##BC036449|CYTIP|9595|cytohesin 1 interacting protein##AK312753|CYTIP|9595|cytohesin 1 interacting protein##NM_004288|CYTIP|9595|cytohesin 1 interacting protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##AF525679|ACVR1C|130399|activin A receptor, type IC##NM_001111031|ACVR1C|130399|activin A receptor, type IC##DQ895570|ACVR1C|130399|activin A receptor, type IC##EU176205|ACVR1C|130399|activin A receptor, type IC##AF525680|ACVR1C|130399|activin A receptor, type IC##AF525681|ACVR1C|130399|activin A receptor, type IC##AY127050|ACVR1C|130399|activin A receptor, type IC##BC022530|ACVR1C|130399|activin A receptor, type IC##NM_001111032|ACVR1C|130399|activin A receptor, type IC##NM_001111033|ACVR1C|130399|activin A receptor, type IC##NM_145259|ACVR1C|130399|activin A receptor, type IC	0.861196	CTCF.p2:-25:0.861
chr8	76527158	76527227	reg1035304.p2	4.588	+	BX571750 NM_004133 EU832451 HQ692842	-74978	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	-207004	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-630283	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	1066318	+	AB083343 TSC_hg19_v1_chr8_+_77593533	1066336	+	AK131399 TSC_hg19_v1_chr8_+_77765961	1238697	+	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4##AB083343|ZFHX4|79776|zinc finger homeobox 4##AK131399|ZFHX4|79776|zinc finger homeobox 4	0.0	
chr1	207597053	207597166	reg1025671.p1	4.587	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-102004	+	TSC_hg19_v1_chr1_+_207495084 AB240569 AB240570	-102032	+	TSC_hg19_v1_chr1_+_207495024 AK312448 AK300621 AK298549 BC001288 M30142 M31516	-102074	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	30552	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	72469	+	NM_175710 BC109190 BC109191	221378	+	AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240569|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240570|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK312448|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK300621|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK298549|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BC001288|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M30142|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M31516|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like	0.019758	
chr12	56191016	56191126	reg1032430.p1	4.587	+	NM_005811 AF100907 AF028333	-53949	+	TSC_hg19_v1_chr12_-_56122865 NM_001040034 NM_001780	-68197	-	TSC_hg19_v1_chr12_-_56122819 BC002349	-68259	-	AB463939 AF486281 TSC_hg19_v1_chr12_-_56211499	20421	-	TSC_hg19_v1_chr12_-_56211507 AF161434 BC007099 BC093051 AK222719 AK290508	20435	-	TSC_hg19_v1_chr12_-_56211511 NM_033082	20462	-	NM_005811|GDF11|10220|growth differentiation factor 11##AF100907|GDF11|10220|growth differentiation factor 11##AF028333|GDF11|10220|growth differentiation factor 11##NM_001040034|CD63|967|CD63 molecule##NM_001780|CD63|967|CD63 molecule##BC002349|CD63|967|CD63 molecule##AF486281|SARNP|84324|SAP domain containing ribonucleoprotein##AF161434|SARNP|84324|SAP domain containing ribonucleoprotein##BC007099|SARNP|84324|SAP domain containing ribonucleoprotein##BC093051|SARNP|84324|SAP domain containing ribonucleoprotein##AK222719|SARNP|84324|SAP domain containing ribonucleoprotein##AK290508|SARNP|84324|SAP domain containing ribonucleoprotein##NM_033082|SARNP|84324|SAP domain containing ribonucleoprotein	0.992981	CTCF.p2:-6:0.993
chr20	31058234	31058405	reg1025586.p2	4.587	+	TSC_hg19_v1_chr20_+_31037448 AL080086	-20817	+	AB023195 TSC_hg19_v1_chr20_+_31017235	-41108	+	TSC_hg19_v1_chr20_+_30946787 AK122923	-111493	+	AK056286 TSC_hg19_v1_chr20_-_31071290 NM_080616	12946	-	BC038088 TSC_hg19_v1_chr20_-_31071385	13072	-	BC023657 BC065483 TSC_hg19_v1_chr20_-_31172902	114604	-	AB023195|ASXL1|171023|additional sex combs like 1 (Drosophila)##AK122923|ASXL1|171023|additional sex combs like 1 (Drosophila)##AK056286|C20orf112|140688|chromosome 20 open reading frame 112##NM_080616|C20orf112|140688|chromosome 20 open reading frame 112##BC038088|C20orf112|140688|chromosome 20 open reading frame 112##BC023657|LOC284804|284804|uncharacterized LOC284804##BC065483|LOC284804|284804|uncharacterized LOC284804	0.033614	
chr4	184365801	184365973	reg1026095.p3	4.587	+	TSC_hg19_v1_chr4_+_184365846 AF246705 AK096180 BC022270 AK225848 EU446516 CU692522	-18	+	TSC_hg19_v1_chr4_+_184365788 AK000043 NM_017632	-101	+	NM_001185149	-122309	-	TSC_hg19_v1_chr4_-_184425612 BC038563	59751	-	TSC_hg19_v1_chr4_+_184426172 AK314000 NM_001564 BC030128 AB012853 AF053537 AB464592 AJ006851 CU688818	60360	+	TSC_hg19_v1_chr4_+_184427252 AK294310 AB196793	61404	+	AF246705|CDKN2AIP|55602|CDKN2A interacting protein##AK096180|CDKN2AIP|55602|CDKN2A interacting protein##BC022270|CDKN2AIP|55602|CDKN2A interacting protein##AK225848|CDKN2AIP|55602|CDKN2A interacting protein##EU446516|CDKN2AIP|55602|CDKN2A interacting protein##AK000043|CDKN2AIP|55602|CDKN2A interacting protein##NM_017632|CDKN2AIP|55602|CDKN2A interacting protein##NM_001185149|CLDN24|100132463|claudin 24##BC038563|LOC389247|389247|uncharacterized LOC389247##AK314000|ING2|3622|inhibitor of growth family, member 2##NM_001564|ING2|3622|inhibitor of growth family, member 2##BC030128|ING2|3622|inhibitor of growth family, member 2##AB012853|ING2|3622|inhibitor of growth family, member 2##AF053537|ING2|3622|inhibitor of growth family, member 2##AJ006851|ING2|3622|inhibitor of growth family, member 2##AK294310|ING2|3622|inhibitor of growth family, member 2##AB196793|ING2|3622|inhibitor of growth family, member 2	0.021181	
chr5	122707417	122707560	reg1030336.p1	4.587	+	NM_001136239 AK297992 AF272898 AF272899	-282644	+	TSC_hg19_v1_chr5_-_122372418 AK304053 NM_000943	-335064	-	CU678110 TSC_hg19_v1_chr5_-_122372375 AK290321 BC002678	-335124	-	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	51656	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	140394	+	BC131507 AB033107 BC151226 NM_020747	1373300	-	NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##AK304053|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##NM_000943|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##AK290321|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##BC002678|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608	0.999562	CTCF.p2:-14:1.000
chr6	137335137	137335257	reg1031955.p1	4.587	+	AK316095 BC087842 NM_001008783 AK295424	-91744	+	TSC_hg19_v1_chr6_+_137143749 U76560 BC006268 AB529018 CR542054 CR542076 CU675317 CU689196	-191422	+	TSC_hg19_v1_chr6_+_137143699 NM_000288 BC031606 U88871	-191495	+	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	30641	-	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	31048	-	AY044429 AY358737 AY040566 AY040567 AY040568 AY358111 AJ313161 AJ313162 NM_052962 NM_181309 NM_181310	159554	-	AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##U76560|PEX7|5191|peroxisomal biogenesis factor 7##BC006268|PEX7|5191|peroxisomal biogenesis factor 7##CR542054|PEX7|5191|peroxisomal biogenesis factor 7##CR542076|PEX7|5191|peroxisomal biogenesis factor 7##NM_000288|PEX7|5191|peroxisomal biogenesis factor 7##BC031606|PEX7|5191|peroxisomal biogenesis factor 7##U88871|PEX7|5191|peroxisomal biogenesis factor 7##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha##AY044429|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358737|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040566|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040567|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY040568|IL22RA2|116379|interleukin 22 receptor, alpha 2##AY358111|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313161|IL22RA2|116379|interleukin 22 receptor, alpha 2##AJ313162|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_052962|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181309|IL22RA2|116379|interleukin 22 receptor, alpha 2##NM_181310|IL22RA2|116379|interleukin 22 receptor, alpha 2	0.087332	
chr6	137555715	137555895	reg1029582.p1	4.587	+	TSC_hg19_v1_chr6_-_137540556 NM_000416	-15247	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-15260	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	-15293	-	BC051352 AK096362 NM_175747	259720	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	632732	+	TSC_hg19_v1_chr6_-_138189314 AK124173	633545	-	NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3	0.0	
chr7	134232212	134232331	reg1024799.p1	4.587	+	AF524864 NM_020299 BC008837	-19901	+	TSC_hg19_v1_chr7_-_134143878 AK313439 BC000260 NM_001628 AK311339	-88307	-	TSC_hg19_v1_chr7_-_134143853 AB209796 BT019859 CR450351 CR542203 CU675153 J04795 DQ890758 DQ892546 DQ893921 DQ895757 M34720 AF328729 J05474 J05017 BC010391 BC005387 X15414	-88438	-	NM_001080538	1577	+	NM_001724 NM_199186 TSC_hg19_v1_chr7_+_134331586 BC017050 AK315439 AK097778 X04327	99314	+	TSC_hg19_v1_chr7_+_134464170 NM_004342 NM_033138 NM_033157 AK289686	231895	+	AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##AK313439|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC000260|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001628|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK311339|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AB209796|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BT019859|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR450351|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR542203|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J04795|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ890758|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ892546|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ893921|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ895757|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##M34720|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF328729|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05474|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05017|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC010391|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC005387|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##X15414|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001080538|AKR1B15|441282|aldo-keto reductase family 1, member B15##NM_001724|BPGM|669|2,3-bisphosphoglycerate mutase##NM_199186|BPGM|669|2,3-bisphosphoglycerate mutase##BC017050|BPGM|669|2,3-bisphosphoglycerate mutase##AK315439|BPGM|669|2,3-bisphosphoglycerate mutase##AK097778|BPGM|669|2,3-bisphosphoglycerate mutase##X04327|BPGM|669|2,3-bisphosphoglycerate mutase##NM_004342|CALD1|800|caldesmon 1##NM_033138|CALD1|800|caldesmon 1##NM_033157|CALD1|800|caldesmon 1##AK289686|CALD1|800|caldesmon 1	0.9804	CTCF.p2:-2:0.980
chr7	89874291	89874467	reg1028868.p1	4.587	+	AF526382 AY358267 NM_001040666	-31246	+	AF455138 NM_001244944 NM_001244945 NM_152999 AK092666 AX747660 TSC_hg19_v1_chr7_+_89841171 AY008443 AY008444 AY008445 NM_001040665 NM_001244946 AK315043	-33264	+	AK304076 TSC_hg19_v1_chr7_+_89783791 AF186249	-90567	+	NM_001039706 NM_001160138 AK093991 AK303034 AX748399 BC036351 AK302636 BC141834 BC142655 BC140742 AY349356	233	+	TSC_hg19_v1_chr7_+_89976015 AF351613 NM_001042717 NM_033107 AK095561 BC107714 CR933597 AK294325 BC144162	101625	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	158325	+	AF526382|STEAP2|261729|STEAP family member 2, metalloreductase##AY358267|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040666|STEAP2|261729|STEAP family member 2, metalloreductase##AF455138|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244944|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244945|STEAP2|261729|STEAP family member 2, metalloreductase##NM_152999|STEAP2|261729|STEAP family member 2, metalloreductase##AK092666|STEAP2|261729|STEAP family member 2, metalloreductase##AY008443|STEAP2|261729|STEAP family member 2, metalloreductase##AY008444|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040665|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244946|STEAP2|261729|STEAP family member 2, metalloreductase##AK315043|STEAP2|261729|STEAP family member 2, metalloreductase##AK304076|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF186249|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##NM_001039706|C7orf63|79846|chromosome 7 open reading frame 63##NM_001160138|C7orf63|79846|chromosome 7 open reading frame 63##AK093991|C7orf63|79846|chromosome 7 open reading frame 63##AK303034|C7orf63|79846|chromosome 7 open reading frame 63##BC036351|C7orf63|79846|chromosome 7 open reading frame 63##AK302636|C7orf63|79846|chromosome 7 open reading frame 63##BC141834|C7orf63|79846|chromosome 7 open reading frame 63##BC142655|C7orf63|79846|chromosome 7 open reading frame 63##BC140742|C7orf63|79846|chromosome 7 open reading frame 63##AY349356|C7orf63|79846|chromosome 7 open reading frame 63##AF351613|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001042717|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_033107|GTPBP10|85865|GTP-binding protein 10 (putative)##AK095561|GTPBP10|85865|GTP-binding protein 10 (putative)##BC107714|GTPBP10|85865|GTP-binding protein 10 (putative)##CR933597|GTPBP10|85865|GTP-binding protein 10 (putative)##AK294325|GTPBP10|85865|GTP-binding protein 10 (putative)##BC144162|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12	0.0	
chr1	573726	573840	reg1031928.p1	4.586	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-206135	+	NM_001005484	-504693	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-544378	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	48259	-	TSC_hg19_v1_chr1_-_714015 BC006361	140234	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	189112	-	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115	0.168637	
chr16	67260818	67260896	reg1021466.p1	4.586	+	BC018785 NM_012163	-137	-	AK056923 AK300976 NM_024712 TSC_hg19_v1_chr16_+_67233033	-27824	+	TSC_hg19_v1_chr16_+_67226106 BC021050 BC033180 X86096 AB451292 AB451425 DQ892803	-34731	+	NM_001004055 AF176701 AK316602 AK298088	57	-	TSC_hg19_v1_chr16_+_67261032 AF161519 NM_014187 BC003080 BC021109 BC013412	195	+	AY192154 AF113615 TSC_hg19_v1_chr16_-_67281385 AB209584 BC033084 AK304232	20491	-	BC018785|LRRC29|26231|leucine rich repeat containing 29##NM_012163|LRRC29|26231|leucine rich repeat containing 29##AK056923|ELMO3|79767|engulfment and cell motility 3##AK300976|ELMO3|79767|engulfment and cell motility 3##NM_024712|ELMO3|79767|engulfment and cell motility 3##BC021050|E2F4|1874|E2F transcription factor 4, p107/p130-binding##BC033180|E2F4|1874|E2F transcription factor 4, p107/p130-binding##X86096|E2F4|1874|E2F transcription factor 4, p107/p130-binding##AB451292|E2F4|1874|E2F transcription factor 4, p107/p130-binding##AB451425|E2F4|1874|E2F transcription factor 4, p107/p130-binding##DQ892803|E2F4|1874|E2F transcription factor 4, p107/p130-binding##NM_001004055|LRRC29|26231|leucine rich repeat containing 29##AF176701|LRRC29|26231|leucine rich repeat containing 29##AK316602|LRRC29|26231|leucine rich repeat containing 29##AK298088|LRRC29|26231|leucine rich repeat containing 29##AF161519|TMEM208|29100|transmembrane protein 208##NM_014187|TMEM208|29100|transmembrane protein 208##BC003080|TMEM208|29100|transmembrane protein 208##BC021109|TMEM208|29100|transmembrane protein 208##BC013412|TMEM208|29100|transmembrane protein 208##AY192154|FHOD1|29109|formin homology 2 domain containing 1##AF113615|FHOD1|29109|formin homology 2 domain containing 1##AB209584|FHOD1|29109|formin homology 2 domain containing 1##BC033084|FHOD1|29109|formin homology 2 domain containing 1##AK304232|FHOD1|29109|formin homology 2 domain containing 1	0.024592	
chr22	39436740	39436921	reg1021884.p2	4.586	+	AK294810 NM_001006666 NM_145298	-190	+	NM_152426 TSC_hg19_v1_chr22_+_39417130	-19703	+	CR456394 TSC_hg19_v1_chr22_+_39410295 AB208979 AB590057 CU012952 CU013240	-26504	+	AK092614 NM_021822 AK315650 BC061914 AF182420 CR456472 BC009683 BC024268 AB266487 AB462950 CU013022 CU013310 CU692904 JF262036	36357	+	NM_001166002 NM_001166003 NM_001166004 NM_181773 BC069023 CR456481	56440	+	TSC_hg19_v1_chr22_-_39529023 BC128418	92217	-	AK294810|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_001006666|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_145298|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_152426|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AK092614|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_021822|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK315650|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC061914|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AF182420|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CR456472|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC009683|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC024268|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AB266487|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013022|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013310|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##JF262036|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC128418|CBX7|23492|chromobox homolog 7	0.0	
chr3	126935337	126935518	reg1027570.p2	4.586	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	-23433	+	AB385178 NM_032242 X87832	-227987	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-512350	+	AB037108 NM_016372	363852	-	TSC_hg19_v1_chr3_-_127309338 BC017058	373917	-	BC050711 NM_001136053 AF289568 TSC_hg19_v1_chr3_-_127309565 NM_001142646	374106	-	AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC017058|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC050711|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001136053|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##AF289568|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001142646|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	0.0	
chr3	190013144	190013324	reg1029279.p1	4.586	+	NM_001134418	-173009	-	NM_018192	-174327	-	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	-174539	-	BC012471 AF114837 AY358652 AF101051 AF134160 AK312866 AK225963 AK296934 TSC_hg19_v1_chr3_-_190040231 NM_021101	26980	-	AK314955 NM_006580	92426	+	CU687168 BC071780 AY358607 NM_207316	154396	-	NM_001134418|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##BC012471|CLDN1|9076|claudin 1##AF114837|CLDN1|9076|claudin 1##AY358652|CLDN1|9076|claudin 1##AF101051|CLDN1|9076|claudin 1##AF134160|CLDN1|9076|claudin 1##AK312866|CLDN1|9076|claudin 1##AK296934|CLDN1|9076|claudin 1##NM_021101|CLDN1|9076|claudin 1##AK314955|CLDN16|10686|claudin 16##NM_006580|CLDN16|10686|claudin 16##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207	0.0	
chr5	173019198	173019333	reg1032545.p1	4.586	+	AK095891 NM_003714	-262760	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	-263822	-	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	-264003	-	BC003114 TSC_hg19_v1_chr5_-_173043602	24332	-	TSC_hg19_v1_chr5_-_173043624 AK301982	24363	-	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	24408	-	AK095891|STC2|8614|stanniocalcin 2##NM_003714|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1	0.998861	CTCF.p2:-10:0.999
chr7	124637035	124637174	reg1029747.p1	4.586	+	NM_001042594 NM_015450	-67068	-	BC130600 BC130604 NM_001024603	-206302	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	-231308	-	NM_000845	2246464	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	2255261	-	TSC_hg19_v1_chr7_-_126893165 AK290197	2256048	-	NM_001042594|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_015450|POT1|25913|protection of telomeres 1 homolog (S. pombe)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##AK290197|GRM8|2918|glutamate receptor, metabotropic 8	0.322414	CTCF.p2:17:0.322
chrX	134706516	134706645	reg1030681.p2	4.586	+	TSC_hg19_v1_chrX_+_134654737 BC140715 AK308423	-51849	+	TSC_hg19_v1_chrX_+_134654584 BX648113 NM_182540 AK096544 AL833319	-52011	+	BC030620 TSC_hg19_v1_chrX_+_134555878 BC051704	-150706	+	AY743709 NM_001017417 BC140735 BC140926 BC144437 BC140913	140654	+	AK098689 AY743710 AY743712 NM_001017436 NM_152582 BC028711 BC140735 BC140926 BC144437	159679	+	AY743711 NM_001017435 BC028711 BC140735 BC140926 BC144437	176953	+	BC140715|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK308423|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BX648113|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##NM_182540|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK096544|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AL833319|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BC030620|LINC00086|399668|long intergenic non-protein coding RNA 86##BC051704|LINC00086|399668|long intergenic non-protein coding RNA 86##AY743709|CT45A1|541466|cancer/testis antigen family 45, member A1##NM_001017417|CT45A1|541466|cancer/testis antigen family 45, member A1##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1##AK098689|CT45A4|441520|cancer/testis antigen family 45, member A4##AY743710|CT45A2|728911|cancer/testis antigen family 45, member A2##AY743712|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_001017436|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_152582|CT45A2|728911|cancer/testis antigen family 45, member A2##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##AY743711|CT45A3|441519|cancer/testis antigen family 45, member A3##NM_001017435|CT45A3|441519|cancer/testis antigen family 45, member A3##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3	0.0	
chr1	59762115	59762236	reg1023434.p1	4.585	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-512440	-	TSC_hg19_v1_chr1_-_59248287 BC009874	-513810	-	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-596423	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	437	+	NM_001244714 AK054842	13578	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	518477	+	BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##BC009874|JUN|3725|jun proto-oncogene##BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)	0.0	
chr2	135218350	135218443	reg1012830.p2	4.585	+	NM_002410 D17716 AF113921	-206511	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-892358	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-1039042	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	258160	-	AK125008 NM_138326 BC016018 BC107420 AB071418	377822	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	458001	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.0	
chr7	144483781	144483889	reg1024730.p1	4.585	+	NM_001080413 AB528776	-376516	-	AK160365 TSC_hg19_v1_chr7_+_144052469 NM_005435 CR749203 BC136661	-431332	+	NM_001001802 NM_001005287	-468618	+	TSC_hg19_v1_chr7_-_144533086 AK091736	49254	-	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	49301	-	NM_014141	1329617	+	NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_001001802|OR2A42|402317|olfactory receptor, family 2, subfamily A, member 42##NM_001005287|OR2A1|346528|olfactory receptor, family 2, subfamily A, member 1##AK091736|TPK1|27010|thiamin pyrophosphokinase 1##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##NM_014141|CNTNAP2|26047|contactin associated protein-like 2	0.0	
chr13	78384713	78384830	reg1028293.p2	4.584	+	NM_001242869 NM_001242870 NM_001242871 NM_144595 AL834203 AK289600 BC045177 AK289714 AK295423	-69365	+	AK294201 NM_001040153	-111756	+	TSC_hg19_v1_chr13_+_78271822 NM_001242868	-112867	+	TSC_hg19_v1_chr13_-_78492936 L06623 X99250 S44866 BC014472 AB209198 AK290699 NM_001122659 NM_003991	108181	-	AF114163 AF114164 TSC_hg19_v1_chr13_-_78493569	108780	-	AF114165 NM_001201397	109131	-	NM_001242869|SLAIN1|122060|SLAIN motif family, member 1##NM_001242870|SLAIN1|122060|SLAIN motif family, member 1##NM_001242871|SLAIN1|122060|SLAIN motif family, member 1##NM_144595|SLAIN1|122060|SLAIN motif family, member 1##AL834203|SLAIN1|122060|SLAIN motif family, member 1##AK289600|SLAIN1|122060|SLAIN motif family, member 1##BC045177|SLAIN1|122060|SLAIN motif family, member 1##AK289714|SLAIN1|122060|SLAIN motif family, member 1##AK295423|SLAIN1|122060|SLAIN motif family, member 1##AK294201|SLAIN1|122060|SLAIN motif family, member 1##NM_001040153|SLAIN1|122060|SLAIN motif family, member 1##NM_001242868|SLAIN1|122060|SLAIN motif family, member 1##L06623|EDNRB|1910|endothelin receptor type B##X99250|EDNRB|1910|endothelin receptor type B##S44866|EDNRB|1910|endothelin receptor type B##BC014472|EDNRB|1910|endothelin receptor type B##AB209198|EDNRB|1910|endothelin receptor type B##AK290699|EDNRB|1910|endothelin receptor type B##NM_001122659|EDNRB|1910|endothelin receptor type B##NM_003991|EDNRB|1910|endothelin receptor type B##AF114165|EDNRB|1910|endothelin receptor type B##NM_001201397|EDNRB|1910|endothelin receptor type B	0.884963	CTCF.p2:-1:0.885
chr2	103059504	103059685	reg1002680.p1	4.584	+	AK300026 AF077346 NM_003853	-24394	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	-80486	+	BC012580 BC030975 NM_003856 AK291578 AB029084	-105863	+	CR627411 NM_001011552	30167	+	BC136377 BC136378 BC035787 NM_003048 AF073299	176589	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	293739	-	AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein##AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein##NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1##BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##CR627411|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##NM_001011552|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##BC136377|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC136378|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##BC035787|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##NM_003048|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AF073299|SLC9A2|6549|solute carrier family 9 (sodium/hydrogen exchanger), member 2##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9	0.0	
chr3	81351363	81351503	reg1008123.p2	4.584	+	NM_002941	-1534375	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-2282846	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-2684448	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	459264	-	TSC_hg19_v1_chr3_-_81810798 AK312245	459365	-	TSC_hg19_v1_chr3_-_81810802 AK297939	459372	-	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.0	
chr4	90835904	90836019	reg1030215.p1	4.584	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-19899	+	NM_001146055	-76515	-	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	-77719	-	AK097436 NM_001145065 AK310825 AB051467 BC021681	212757	+	BC051694 NM_207491	320220	+	AB209318 NM_001510 AK308611	2389631	+	AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##NM_001146055|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2	0.327487	CTCF.p2:-15:0.327
chr6	108840283	108840405	reg1028992.p1	4.584	+	TSC_hg19_v1_chr6_+_108616194 AF520418 BC018445 NM_145315	-224205	+	TSC_hg19_v1_chr6_-_108582316 NM_003795 NM_152827	-257959	-	TSC_hg19_v1_chr6_-_108582245 BC015179 BC014580 AK289476	-258106	-	TSC_hg19_v1_chr6_+_108881027 NM_201559 BC020227 BC021224	40679	+	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	41731	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	41913	+	AF520418|LACE1|246269|lactation elevated 1##BC018445|LACE1|246269|lactation elevated 1##NM_145315|LACE1|246269|lactation elevated 1##NM_003795|SNX3|8724|sorting nexin 3##NM_152827|SNX3|8724|sorting nexin 3##BC015179|SNX3|8724|sorting nexin 3##BC014580|SNX3|8724|sorting nexin 3##AK289476|SNX3|8724|sorting nexin 3##NM_201559|FOXO3|2309|forkhead box O3##BC020227|FOXO3|2309|forkhead box O3##BC021224|FOXO3|2309|forkhead box O3##BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3	0.999816	CTCF.p2:10:1.000
chr9	40887376	40887451	reg1025978.p1	4.584	+	AK057375 AK292150 NM_033160	-95327	-	NM_001083124	-187123	+	AK302569 NM_001040065 NM_001085452 BC146855	-1002452	+	BC040528 NM_001113541 NM_015667 NM_001242613	439966	-	BC040528 NM_001113541 NM_015667	613265	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	1067501	-	AK057375|ZNF658|26149|zinc finger protein 658##AK292150|ZNF658|26149|zinc finger protein 658##NM_033160|ZNF658|26149|zinc finger protein 658##NM_001083124|FAM75A3|727830|family with sequence similarity 75, member A3##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881	0.397076	CTCF.p2:-2:0.397
chr10	97005200	97005362	reg1027685.p1	4.583	+	AK126134 NM_207321	-51325	+	M21942 M21941 DQ891400 DQ894579 M17397 M17398 AK303813 Y00498 AK292753 AK293327 AK293328 AK298401 AK315823 BC020596 NM_000770 NM_001198853 NM_001198854 NM_001198855	-176118	-	TSC_hg19_v1_chr10_+_96698414 AK289420 AK298458 BC020754 NM_000771 BC070317 M61855 M61857 BC125054 D00173 M21939 M15331 S46963	-306839	+	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	45501	-	AM393082 NM_001034954 NM_001034955 NM_001034956 NM_001034957 NM_006434	195634	-	TSC_hg19_v1_chr10_-_97321129 AB037717 BC152463 AK022468 AK300407 AK304753 AL117472 AM260536 NM_015385 NM_024991	315858	-	AK126134|C10orf129|142827|chromosome 10 open reading frame 129##NM_207321|C10orf129|142827|chromosome 10 open reading frame 129##M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1##AM393082|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034954|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034955|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034956|SORBS1|10580|sorbin and SH3 domain containing 1##NM_001034957|SORBS1|10580|sorbin and SH3 domain containing 1##NM_006434|SORBS1|10580|sorbin and SH3 domain containing 1##AB037717|SORBS1|10580|sorbin and SH3 domain containing 1##BC152463|SORBS1|10580|sorbin and SH3 domain containing 1##AK022468|SORBS1|10580|sorbin and SH3 domain containing 1##AK300407|SORBS1|10580|sorbin and SH3 domain containing 1##AK304753|SORBS1|10580|sorbin and SH3 domain containing 1##AL117472|SORBS1|10580|sorbin and SH3 domain containing 1##AM260536|SORBS1|10580|sorbin and SH3 domain containing 1##NM_015385|SORBS1|10580|sorbin and SH3 domain containing 1##NM_024991|SORBS1|10580|sorbin and SH3 domain containing 1	0.0	
chr20	52531679	52531794	reg1003157.p1	4.583	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-320937	-	AF041259 NM_006526	-332101	-	AK302570 NM_001193421	-729915	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	155326	-	AK315220 NM_003657	155567	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	258784	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.252736	CTCF.p2:25:0.253
chr5	134798057	134798184	reg1026948.p1	4.583	+	AK131088 AB161513 NM_001099221	-10083	-	CU686932 BC074831 BC074832 BC069608 BC069610 BC117156 BC117158 AB074498 NM_130848	-15203	-	TSC_hg19_v1_chr5_-_134735578 BC013331 AF054174 NM_004893	-62547	-	BC008687 BC028226 NM_006161 TSC_hg19_v1_chr5_-_134871655 AB593107 AK314280	73526	-	AF086340 AF073957 AF144103 BT007080 AB528117 AM392840 AF106911 BC003513 AY358906 TSC_hg19_v1_chr5_-_134914682 AB543622 AK075514	116453	-	NM_004887	116848	-	AB161513|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##NM_001099221|TIFAB|497189|TRAF-interacting protein with forkhead-associated domain, family member B##BC074831|C5orf20|140947|chromosome 5 open reading frame 20##BC074832|C5orf20|140947|chromosome 5 open reading frame 20##BC069608|C5orf20|140947|chromosome 5 open reading frame 20##BC069610|C5orf20|140947|chromosome 5 open reading frame 20##BC117156|C5orf20|140947|chromosome 5 open reading frame 20##BC117158|C5orf20|140947|chromosome 5 open reading frame 20##AB074498|C5orf20|140947|chromosome 5 open reading frame 20##NM_130848|C5orf20|140947|chromosome 5 open reading frame 20##BC013331|H2AFY|9555|H2A histone family, member Y##AF054174|H2AFY|9555|H2A histone family, member Y##NM_004893|H2AFY|9555|H2A histone family, member Y##BC008687|NEUROG1|4762|neurogenin 1##BC028226|NEUROG1|4762|neurogenin 1##NM_006161|NEUROG1|4762|neurogenin 1##AB593107|NEUROG1|4762|neurogenin 1##AF086340|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF073957|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF144103|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BT007080|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AM392840|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF106911|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BC003513|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AY358906|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AB543622|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AK075514|CXCL14|9547|chemokine (C-X-C motif) ligand 14##NM_004887|CXCL14|9547|chemokine (C-X-C motif) ligand 14	0.433022	CTCF.p2:106:0.433
chr5	34452445	34452552	reg1031467.p2	4.583	+	EU399231 EU399232 BC112925 AF329837 BC120990 AF326976 AY358388 AK075533 BX640995 AK315921 AK295968 NM_030945 NM_181435	-409196	-	TSC_hg19_v1_chr5_-_34008240 AK225749	-444254	-	TSC_hg19_v1_chr5_-_34008156 BT007193 CU679371 AM392625 AY330488 AY330489 AY935981 BC009471 FJ498906 FJ498907 FJ498908 EF560721 AK292988 AF158378 AK022765 AK222831 AK000912 AF047020 AJ130733 NM_001167595 NM_014324 NM_203382	-444335	-	TSC_hg19_v1_chr5_+_34656432 NM_001145522 NM_015577	203915	+	TSC_hg19_v1_chr5_+_34656506 BC052988 AF155135 AK314379	204014	+	AB037755 NM_001145520 TSC_hg19_v1_chr5_+_34656599	204099	+	EU399231|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##EU399232|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC112925|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF329837|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BC120990|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AF326976|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AY358388|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK075533|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##BX640995|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK315921|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK295968|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_030945|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##NM_181435|C1QTNF3|114899|C1q and tumor necrosis factor related protein 3##AK225749|AMACR|23600|alpha-methylacyl-CoA racemase##BT007193|AMACR|23600|alpha-methylacyl-CoA racemase##AM392625|AMACR|23600|alpha-methylacyl-CoA racemase##AY330488|AMACR|23600|alpha-methylacyl-CoA racemase##AY330489|AMACR|23600|alpha-methylacyl-CoA racemase##AY935981|AMACR|23600|alpha-methylacyl-CoA racemase##BC009471|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498906|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498907|AMACR|23600|alpha-methylacyl-CoA racemase##FJ498908|AMACR|23600|alpha-methylacyl-CoA racemase##EF560721|AMACR|23600|alpha-methylacyl-CoA racemase##AK292988|AMACR|23600|alpha-methylacyl-CoA racemase##AF158378|AMACR|23600|alpha-methylacyl-CoA racemase##AK022765|AMACR|23600|alpha-methylacyl-CoA racemase##AK222831|AMACR|23600|alpha-methylacyl-CoA racemase##AK000912|AMACR|23600|alpha-methylacyl-CoA racemase##AF047020|AMACR|23600|alpha-methylacyl-CoA racemase##AJ130733|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001167595|AMACR|23600|alpha-methylacyl-CoA racemase##NM_014324|AMACR|23600|alpha-methylacyl-CoA racemase##NM_203382|AMACR|23600|alpha-methylacyl-CoA racemase##NM_001145522|RAI14|26064|retinoic acid induced 14##NM_015577|RAI14|26064|retinoic acid induced 14##BC052988|RAI14|26064|retinoic acid induced 14##AF155135|RAI14|26064|retinoic acid induced 14##AK314379|RAI14|26064|retinoic acid induced 14##AB037755|RAI14|26064|retinoic acid induced 14##NM_001145520|RAI14|26064|retinoic acid induced 14	0.237361	CTCF.p2:14:0.237
chr8	4691480	4691596	reg1030804.p1	4.583	+	AK128880 TSC_hg19_v1_chr8_-_2585966	-2105556	-	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-2698336	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-2738630	+	AY017307 TSC_hg19_v1_chr8_-_4852228	160687	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	160756	-	TSC_hg19_v1_chr8_-_6264053 BC036625	1572519	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.980101	CTCF.p2:25:0.980
chr9	27535904	27536027	reg1027784.p2	4.583	+	TSC_hg19_v1_chr9_-_27529809 AL832572 BC033027 AK023266 NM_024761	-6315	-	AF146759 AF315688 NM_020124 AY358855 AB463795	-11643	+	BC137351 BC137352 BC144602 BC014307 AJ278482 NM_001161585 NM_020641	-238844	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	37506	-	AK057806 JN681271 NM_145005	37876	-	AK056372 NM_152570	1183337	-	AL832572|MOB3B|79817|MOB kinase activator 3B##BC033027|MOB3B|79817|MOB kinase activator 3B##AK023266|MOB3B|79817|MOB kinase activator 3B##NM_024761|MOB3B|79817|MOB kinase activator 3B##AF146759|IFNK|56832|interferon, kappa##AF315688|IFNK|56832|interferon, kappa##NM_020124|IFNK|56832|interferon, kappa##AY358855|IFNK|56832|interferon, kappa##BC137351|C9orf11|54586|chromosome 9 open reading frame 11##BC137352|C9orf11|54586|chromosome 9 open reading frame 11##BC144602|C9orf11|54586|chromosome 9 open reading frame 11##BC014307|C9orf11|54586|chromosome 9 open reading frame 11##AJ278482|C9orf11|54586|chromosome 9 open reading frame 11##NM_001161585|C9orf11|54586|chromosome 9 open reading frame 11##NM_020641|C9orf11|54586|chromosome 9 open reading frame 11##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2	0.057155	
chr10	22904844	22905024	reg1030829.p1	4.582	+	TSC_hg19_v1_chr10_+_22726003 AK295718	-178935	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-270478	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-294769	+	AK294817 TSC_hg19_v1_chr10_-_23003038	98103	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	98556	-	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	312047	+	AK295718|LOC100289455|100289455|uncharacterized LOC100289455##NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3	0.0	
chr2	123208773	123208872	reg1030526.p2	4.582	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-695585	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-714357	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-801177	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	1574042	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	4204885	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	4204970	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.95833	CTCF.p2:10:0.958
chr2	173349165	173349332	reg1032372.p1	4.582	+	TSC_hg19_v1_chr2_+_173292395 X53586 BC136455 BC136456 X59512 AB208842	-56769	+	TSC_hg19_v1_chr2_+_173292316 NM_000210 NM_001079818 BC007002	-56928	+	AK311695 AK296496 TSC_hg19_v1_chr2_+_173292147	-57121	+	TSC_hg19_v1_chr2_+_173420776 NM_002610	71533	+	TSC_hg19_v1_chr2_+_173420856 AK312700 AK304388 BC039158	71577	+	AB528474 CU691664 TSC_hg19_v1_chr2_+_173420875 DQ891300 DQ893348 DQ894484 DQ896668 DQ234350	71627	+	X53586|ITGA6|3655|integrin, alpha 6##BC136455|ITGA6|3655|integrin, alpha 6##BC136456|ITGA6|3655|integrin, alpha 6##X59512|ITGA6|3655|integrin, alpha 6##AB208842|ITGA6|3655|integrin, alpha 6##NM_000210|ITGA6|3655|integrin, alpha 6##NM_001079818|ITGA6|3655|integrin, alpha 6##BC007002|ITGA6|3655|integrin, alpha 6##AK311695|ITGA6|3655|integrin, alpha 6##AK296496|ITGA6|3655|integrin, alpha 6##NM_002610|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##AK312700|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##AK304388|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##BC039158|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ891300|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ893348|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ894484|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ896668|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ234350|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1	0.729342	CTCF.p2:31:0.533
chr2	90485345	90485458	reg1023168.p2	4.582	+	TSC_hg19_v1_chr2_+_90211706 Z69013	-273683	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-407647	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-865548	-	TSC_hg19_v1_chr2_-_91847997 BC030764	1362602	-	AK097438 BC021716 NM_144705 AK296678 CU692394	5051849	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	5206081	+	BC070334|IGKC|3514|immunoglobulin kappa constant##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein	0.0	
chr3	182840395	182840575	reg1007894.p2	4.582	+	BC036395 TSC_hg19_v1_chr3_-_182833987	-6562	-	AK295293 TSC_hg19_v1_chr3_-_182817343 AK023051 AB029826 AF310339 BC004187 BC004214 AF310972 NM_020166	-23135	-	AB587379 CU678606 TSC_hg19_v1_chr3_-_182817309 CR749608 AK316428 AB209737 AL442091 AK294882	-23204	-	TSC_hg19_v1_chr3_-_182880435 DQ892118	39954	-	TSC_hg19_v1_chr3_-_182880523 AB013924 AK313172 BC032940 NM_014398	40079	-	TSC_hg19_v1_chr3_+_182970969 NM_032047 AK074424	130463	+	BC036395|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK295293|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK023051|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AB029826|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AF310339|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##BC004187|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##BC004214|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AF310972|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##NM_020166|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##CR749608|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK316428|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AB209737|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AL442091|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK294882|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##DQ892118|LAMP3|27074|lysosomal-associated membrane protein 3##AB013924|LAMP3|27074|lysosomal-associated membrane protein 3##AK313172|LAMP3|27074|lysosomal-associated membrane protein 3##BC032940|LAMP3|27074|lysosomal-associated membrane protein 3##NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3##NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	0.0	
chr5	132082669	132082795	reg1032020.p1	4.582	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	-9515	-	NM_000589 NM_172348	-73360	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	-88842	+	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	412	+	TSC_hg19_v1_chr5_-_132112954 BC140759 BC171779 AK057797 AF179995 AF440761 AF440762 D86957 NM_001098811 NM_001098812 NM_015146	30272	-	AF440763 NM_001098813 TSC_hg19_v1_chr5_-_132113705	30855	-	AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2##BC140759|SEPT8|23176|septin 8##BC171779|SEPT8|23176|septin 8##AK057797|SEPT8|23176|septin 8##AF179995|SEPT8|23176|septin 8##AF440761|SEPT8|23176|septin 8##AF440762|SEPT8|23176|septin 8##D86957|SEPT8|23176|septin 8##NM_001098811|SEPT8|23176|septin 8##NM_001098812|SEPT8|23176|septin 8##NM_015146|SEPT8|23176|septin 8##AF440763|SEPT8|23176|septin 8##NM_001098813|SEPT8|23176|septin 8	0.026286	
chr9	8895881	8895991	reg1029622.p1	4.582	+	TSC_hg19_v1_chr9_+_8858136 AK094342	-37803	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-162017	-	TSC_hg19_v1_chr9_+_8713275 AY779046	-182644	+	BC028038 NM_002839	1716786	-	NM_000550 X51420 BC052608	3797489	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	3879080	+	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##AY779046|RPL18A|6142|ribosomal protein L18a##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150	0.197861	
chr11	19463939	19464062	reg1030785.p1	4.581	+	AB063115 NM_001111018 AJ488205	-91685	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-200799	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-201525	-	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	270866	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	580388	+	TSC_hg19_v1_chr11_+_20049136 AK307574	585132	+	AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2	0.0	
chr11	62078552	62078732	reg1002643.p1	4.581	+	HQ258026 AY236538 BC130639 BC130645 AY359052 NM_206998	-12133	-	BC067220 NM_002411 U33147 BC128252 BC128402 AY217100	-40984	+	NM_006551 BC069290 BC104840 BC104838	-68902	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	26183	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	26306	+	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	107894	+	HQ258026|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY236538|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130639|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130645|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY359052|SCGB1D4|404552|secretoglobin, family 1D, member 4##NM_206998|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC067220|SCGB2A2|4250|secretoglobin, family 2A, member 2##NM_002411|SCGB2A2|4250|secretoglobin, family 2A, member 2##U33147|SCGB2A2|4250|secretoglobin, family 2A, member 2##BC128252|SCGB2A2|4250|secretoglobin, family 2A, member 2##BC128402|SCGB2A2|4250|secretoglobin, family 2A, member 2##AY217100|SCGB2A2|4250|secretoglobin, family 2A, member 2##NM_006551|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC069290|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104840|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104838|SCGB1D2|10647|secretoglobin, family 1D, member 2##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	0.0	
chr17	76170492	76170673	reg1023481.p1	4.581	+	TSC_hg19_v1_chr17_+_76164661 AJ002308 AY358916 NM_004710 BC000407 BC105992 BC029755 DQ891832 DQ895019	-5922	+	AY358510 NM_001163075	-28149	+	BC023597 NM_007267 TSC_hg19_v1_chr17_-_76128499	-42082	-	AB451268 AB451395 BT006941 AB591021 BC007872 BC007986 BC006484 AK314950 K02581 TSC_hg19_v1_chr17_-_76183133 NM_003258	12597	-	BC132824 NM_001010982 NM_001145526 TSC_hg19_v1_chr17_+_76183442 BC020920 BC142973 BX647783 BX648442 EU832465 EU832546 HQ258157	12841	+	NM_001012270 NM_001012271 NM_001168 TSC_hg19_v1_chr17_+_76210320 AK301793	39717	+	AJ002308|SYNGR2|9144|synaptogyrin 2##AY358916|SYNGR2|9144|synaptogyrin 2##NM_004710|SYNGR2|9144|synaptogyrin 2##BC000407|SYNGR2|9144|synaptogyrin 2##BC105992|SYNGR2|9144|synaptogyrin 2##BC029755|SYNGR2|9144|synaptogyrin 2##DQ891832|SYNGR2|9144|synaptogyrin 2##DQ895019|SYNGR2|9144|synaptogyrin 2##AY358510|C17orf99|100141515|chromosome 17 open reading frame 99##NM_001163075|C17orf99|100141515|chromosome 17 open reading frame 99##BC023597|TMC6|11322|transmembrane channel-like 6##NM_007267|TMC6|11322|transmembrane channel-like 6##AB451268|TK1|7083|thymidine kinase 1, soluble##AB451395|TK1|7083|thymidine kinase 1, soluble##BT006941|TK1|7083|thymidine kinase 1, soluble##BC007872|TK1|7083|thymidine kinase 1, soluble##BC007986|TK1|7083|thymidine kinase 1, soluble##BC006484|TK1|7083|thymidine kinase 1, soluble##AK314950|TK1|7083|thymidine kinase 1, soluble##K02581|TK1|7083|thymidine kinase 1, soluble##NM_003258|TK1|7083|thymidine kinase 1, soluble##BC132824|AFMID|125061|arylformamidase##NM_001010982|AFMID|125061|arylformamidase##NM_001145526|AFMID|125061|arylformamidase##BC020920|AFMID|125061|arylformamidase##BC142973|AFMID|125061|arylformamidase##BX648442|AFMID|125061|arylformamidase##EU832465|AFMID|125061|arylformamidase##EU832546|AFMID|125061|arylformamidase##HQ258157|AFMID|125061|arylformamidase##NM_001012270|BIRC5|332|baculoviral IAP repeat containing 5##NM_001012271|BIRC5|332|baculoviral IAP repeat containing 5##NM_001168|BIRC5|332|baculoviral IAP repeat containing 5##AK301793|BIRC5|332|baculoviral IAP repeat containing 5	0.0	
chr19	19663700	19663813	reg1029017.p1	4.581	+	TSC_hg19_v1_chr19_+_19649101 AK314213 AF542080	-14650	+	AK127735 BC068256 NM_153221 TSC_hg19_v1_chr19_+_19649088	-14684	+	NM_001190328 NM_198537 TSC_hg19_v1_chr19_+_19639680 AK126916 BC020948 AB464360 DQ778079 DQ778080	-24051	+	BC033067 BC143092 AK097427 AK301631 BC143588 BC143589 TSC_hg19_v1_chr19_-_19729548 BC141859 NM_025245	65825	-	AF011466 AK316573 BC025695 AF197929 TSC_hg19_v1_chr19_-_19739025 NM_004720	75251	-	BC126436 BC144142 TSC_hg19_v1_chr19_-_19754416 BC032057 AK297220 AF132541	90637	-	AK314213|CILP2|148113|cartilage intermediate layer protein 2##AF542080|CILP2|148113|cartilage intermediate layer protein 2##AK127735|CILP2|148113|cartilage intermediate layer protein 2##BC068256|CILP2|148113|cartilage intermediate layer protein 2##NM_153221|CILP2|148113|cartilage intermediate layer protein 2##NM_001190328|YJEFN3|374887|YjeF N-terminal domain containing 3##NM_198537|YJEFN3|374887|YjeF N-terminal domain containing 3##AK126916|YJEFN3|374887|YjeF N-terminal domain containing 3##BC020948|YJEFN3|374887|YjeF N-terminal domain containing 3##DQ778079|YJEFN3|374887|YjeF N-terminal domain containing 3##DQ778080|YJEFN3|374887|YjeF N-terminal domain containing 3##BC033067|PBX4|80714|pre-B-cell leukemia homeobox 4##BC143092|PBX4|80714|pre-B-cell leukemia homeobox 4##AK097427|PBX4|80714|pre-B-cell leukemia homeobox 4##AK301631|PBX4|80714|pre-B-cell leukemia homeobox 4##BC143588|PBX4|80714|pre-B-cell leukemia homeobox 4##BC143589|PBX4|80714|pre-B-cell leukemia homeobox 4##BC141859|PBX4|80714|pre-B-cell leukemia homeobox 4##NM_025245|PBX4|80714|pre-B-cell leukemia homeobox 4##AF011466|LPAR2|9170|lysophosphatidic acid receptor 2##AK316573|LPAR2|9170|lysophosphatidic acid receptor 2##BC025695|LPAR2|9170|lysophosphatidic acid receptor 2##AF197929|LPAR2|9170|lysophosphatidic acid receptor 2##NM_004720|LPAR2|9170|lysophosphatidic acid receptor 2##BC126436|GMIP|51291|GEM interacting protein##BC144142|GMIP|51291|GEM interacting protein##BC032057|GMIP|51291|GEM interacting protein##AK297220|GMIP|51291|GEM interacting protein##AF132541|GMIP|51291|GEM interacting protein	0.0	
chr5	55376848	55377029	reg1024239.p2	4.581	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-86175	-	NM_001242636 NM_001242639	-227789	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-229669	+	AK123389 NM_024669	152247	-	NM_005921	733961	+	TSC_hg19_v1_chr5_+_56111375 AK307828	734426	+	BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr10	78071599	78071734	reg1029444.p1	4.580	+	AF267860 NM_032024	-529148	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-910101	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-910185	-	AF118141 TSC_hg19_v1_chr10_-_79397246	1325559	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	1325670	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	1325740	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.697565	CTCF.p2:11:0.698
chr1	159181258	159181439	reg1004280.p1	4.580	+	NM_001122951 U01839	-6300	+	AK291593 NM_002036	-7546	+	AK289541 NM_021189 TSC_hg19_v1_chr1_+_159141404 AK308915 NM_001127173 AF363367 AY358332 AF062733 BC033819 AY046418 AF529206 DQ890848 DQ894002	-39883	+	NM_002001 X06948	78155	+	AB529279 NM_001004467	103100	-	BC112290 BC112292 NM_012351 BC069150	228181	+	NM_001122951|DARC|2532|Duffy blood group, chemokine receptor##U01839|DARC|2532|Duffy blood group, chemokine receptor##AK291593|DARC|2532|Duffy blood group, chemokine receptor##NM_002036|DARC|2532|Duffy blood group, chemokine receptor##AK289541|CADM3|57863|cell adhesion molecule 3##NM_021189|CADM3|57863|cell adhesion molecule 3##AK308915|CADM3|57863|cell adhesion molecule 3##NM_001127173|CADM3|57863|cell adhesion molecule 3##AF363367|CADM3|57863|cell adhesion molecule 3##AY358332|CADM3|57863|cell adhesion molecule 3##AF062733|CADM3|57863|cell adhesion molecule 3##BC033819|CADM3|57863|cell adhesion molecule 3##AY046418|CADM3|57863|cell adhesion molecule 3##AF529206|CADM3|57863|cell adhesion molecule 3##DQ890848|CADM3|57863|cell adhesion molecule 3##DQ894002|CADM3|57863|cell adhesion molecule 3##NM_002001|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide##X06948|FCER1A|2205|Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide##NM_001004467|OR10J3|441911|olfactory receptor, family 10, subfamily J, member 3##BC112290|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##BC112292|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##NM_012351|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1##BC069150|OR10J1|26476|olfactory receptor, family 10, subfamily J, member 1	0.0	
chr12	90115497	90115678	reg1030647.p2	4.580	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-12042	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-12900	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-65736	-	BC026075 BC024183 BC027600 BC034491 NM_152638	1233364	-	U59111 TSC_hg19_v1_chr12_-_91398750	1283160	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	1283192	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.0	
chr18	13567794	13567974	reg1021292.p3	4.580	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-349099	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-576539	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-619820	+	NM_001003674 NM_001003675	43780	+	AF009426 AF009427 NM_004338 NM_181483	52982	+	TSC_hg19_v1_chr18_-_13726549 AK055618	158622	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.0	
chr19	46553026	46553162	reg1035844.p1	4.580	+	AY672114 NM_001002923	-8821	-	NM_005091	-26539	-	TSC_hg19_v1_chr19_+_46498724 GQ375050	-54367	+	HQ258051 BC130593 BC130597 AY358434 AY672113 NM_207393	74827	-	AY672112 NM_001002915	97944	+	AY358692 NM_001135113	98405	+	AY672114|IGFL4|444882|IGF-like family member 4##NM_001002923|IGFL4|444882|IGF-like family member 4##NM_005091|PGLYRP1|8993|peptidoglycan recognition protein 1##GQ375050|CCDC61|729440|coiled-coil domain containing 61##HQ258051|IGFL3|388555|IGF-like family member 3##BC130593|IGFL3|388555|IGF-like family member 3##BC130597|IGFL3|388555|IGF-like family member 3##AY358434|IGFL3|388555|IGF-like family member 3##AY672113|IGFL3|388555|IGF-like family member 3##NM_207393|IGFL3|388555|IGF-like family member 3##AY672112|IGFL2|147920|IGF-like family member 2##NM_001002915|IGFL2|147920|IGF-like family member 2##AY358692|IGFL2|147920|IGF-like family member 2##NM_001135113|IGFL2|147920|IGF-like family member 2	0.807485	CTCF.p2:2:0.807
chr22	48233601	48233707	reg1032468.p2	4.580	+	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	-206151	+	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	-1075054	+	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	-1099499	-	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	651626	+	AK125256 NM_015381 AK123443 AY358847	738507	+	AK124962 TSC_hg19_v1_chr22_-_50051168 BC033837 BC048207	1817479	-	AK093107|LOC284930|284930|uncharacterized LOC284930##NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK124962|C22orf34|348645|chromosome 22 open reading frame 34##BC048207|C22orf34|348645|chromosome 22 open reading frame 34	0.99465	CTCF.p2:6:0.995
chr2	89572698	89572879	reg1029783.p1	4.580	+	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-59555	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-130199	-	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	-280375	-	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	47065	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	504966	+	TSC_hg19_v1_chr2_+_90211706 Z69013	638930	+	BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC070334|IGKC|3514|immunoglobulin kappa constant	0.929573	CTCF.p2:39:0.930
chr3	194971677	194971848	reg1030205.p2	4.580	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-564259	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-565139	+	NM_018385	-578557	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	20088	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	191940	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	298351	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.081524	
chr6	42104300	42104390	reg1028568.p1	4.580	+	TSC_hg19_v1_chr6_+_42018268 BC018796 AF465841 CU689710	-86074	+	BC033728 NM_138572 TSC_hg19_v1_chr6_+_42018261 AK057383 BC119678 BC119679 AL833401	-86089	+	NM_001136017 NM_001136126	-87736	-	NM_001164446	6369	-	AK313865 NM_000409 BC031663 AK125780	18818	+	BX537393 NM_002098	58348	-	BC018796|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AF465841|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC033728|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##NM_138572|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AK057383|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119678|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119679|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AL833401|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##NM_001136017|CCND3|896|cyclin D3##NM_001136126|CCND3|896|cyclin D3##NM_001164446|C6orf132|647024|chromosome 6 open reading frame 132##AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)##NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)##BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)##AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)##BX537393|GUCA1B|2979|guanylate cyclase activator 1B (retina)##NM_002098|GUCA1B|2979|guanylate cyclase activator 1B (retina)	0.049683	
chrX	106196314	106196462	reg1029400.p1	4.580	+	TSC_hg19_v1_chrX_+_106171329 AY358474 BC014424 AB463528 DQ892216 DQ895412 AF250558	-24995	+	NM_020384 BC071747 AK075405 AK075371	-32721	+	AK312515 NM_001171095	-34799	+	EF125209 TSC_hg19_v1_chrX_-_106243332	46896	-	TSC_hg19_v1_chrX_-_106243443 EF125210 NM_001085354 NM_024657	47086	-	TSC_hg19_v1_chrX_-_106362035 AK001878 BC006986	165644	-	AY358474|CLDN2|9075|claudin 2##BC014424|CLDN2|9075|claudin 2##DQ892216|CLDN2|9075|claudin 2##DQ895412|CLDN2|9075|claudin 2##AF250558|CLDN2|9075|claudin 2##NM_020384|CLDN2|9075|claudin 2##BC071747|CLDN2|9075|claudin 2##AK075405|CLDN2|9075|claudin 2##AK075371|CLDN2|9075|claudin 2##AK312515|CLDN2|9075|claudin 2##NM_001171095|CLDN2|9075|claudin 2##EF125209|MORC4|79710|MORC family CW-type zinc finger 4##EF125210|MORC4|79710|MORC family CW-type zinc finger 4##NM_001085354|MORC4|79710|MORC family CW-type zinc finger 4##NM_024657|MORC4|79710|MORC family CW-type zinc finger 4##AK001878|RBM41|55285|RNA binding motif protein 41##BC006986|RBM41|55285|RNA binding motif protein 41	0.0	
chr11	36432885	36433000	reg1031180.p1	4.579	+	NM_001160169	-10396	+	NM_001160168 NM_024841 BX640959 AK024275	-35382	+	NM_001160167 AK055042	-115162	+	TSC_hg19_v1_chr11_-_36531820 U78798 BC031052 AK292978 NM_004620 NM_145803	98872	-	NM_000448 M29474	156626	+	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	183162	+	NM_001160169|PRR5L|79899|proline rich 5 like##NM_001160168|PRR5L|79899|proline rich 5 like##NM_024841|PRR5L|79899|proline rich 5 like##BX640959|PRR5L|79899|proline rich 5 like##AK024275|PRR5L|79899|proline rich 5 like##NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like##U78798|TRAF6|7189|TNF receptor-associated factor 6##BC031052|TRAF6|7189|TNF receptor-associated factor 6##AK292978|TRAF6|7189|TNF receptor-associated factor 6##NM_004620|TRAF6|7189|TNF receptor-associated factor 6##NM_145803|TRAF6|7189|TNF receptor-associated factor 6##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74	0.0	
chr18	60959888	60959955	reg1035279.p1	4.579	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-163986	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-575613	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-575995	+	BC027258 NM_000633 NM_000657	26639	-	TSC_hg19_v1_chr18_-_60986977 X06487	27072	-	TSC_hg19_v1_chr18_-_60987309 M13994	27365	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr20	34274903	34275002	reg1030458.p1	4.579	+	TSC_hg19_v1_chr20_-_34252864 NM_001198838 NM_001198840 NM_001198863 NM_006047 NM_152838 NM_152925 NM_152926 NM_152927 NM_152928	-22076	-	TSC_hg19_v1_chr20_-_34252823 AK308795 AK092239 AK299371 BC021010 BC012787 BC013981	-22130	-	TSC_hg19_v1_chr20_-_34252792 AF345332 AF393214 BC001142 AB018308	-22159	-	TSC_hg19_v1_chr20_-_34287275 AK056242 CU688074 BC018471 BC065560 AK001470 AK301969 AK001265 AK223239 AF097025 AK295215 AK297969 AK302023 AK312293 NM_001198989 NM_021100	12289	-	NM_080748 TSC_hg19_v1_chr20_+_34287326 AK000548 AM397245 BC105281 GU727625 AM397244 BC008488 AM397246	12377	+	L10911 BC107886 TSC_hg19_v1_chr20_-_34329965 L10910 BC131543	54995	-	NM_001198838|RBM12|10137|RNA binding motif protein 12##NM_001198840|RBM12|10137|RNA binding motif protein 12##NM_001198863|CPNE1|8904|copine I##NM_006047|RBM12|10137|RNA binding motif protein 12##NM_152838|RBM12|10137|RNA binding motif protein 12##NM_152925|CPNE1|8904|copine I##NM_152926|CPNE1|8904|copine I##NM_152927|CPNE1|8904|copine I##NM_152928|CPNE1|8904|copine I##AK308795|CPNE1|8904|copine I##AK092239|RBM12|10137|RNA binding motif protein 12##AK299371|RBM12|10137|RNA binding motif protein 12##BC021010|CPNE1|8904|copine I##BC012787|RBM12|10137|RNA binding motif protein 12##BC013981|RBM12|10137|RNA binding motif protein 12##AF345332|RBM12|10137|RNA binding motif protein 12##AF393214|RBM12|10137|RNA binding motif protein 12##BC001142|CPNE1|8904|copine I##AB018308|RBM12|10137|RNA binding motif protein 12##AK056242|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##BC018471|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##BC065560|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##AK001470|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##AK301969|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##AK001265|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##AK223239|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##AF097025|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##AK295215|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##AK297969|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##AK302023|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##AK312293|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##NM_001198989|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##NM_021100|NFS1|9054|NFS1 nitrogen fixation 1 homolog (S. cerevisiae)##NM_080748|ROMO1|140823|reactive oxygen species modulator 1##AK000548|ROMO1|140823|reactive oxygen species modulator 1##AM397245|ROMO1|140823|reactive oxygen species modulator 1##BC105281|ROMO1|140823|reactive oxygen species modulator 1##GU727625|ROMO1|140823|reactive oxygen species modulator 1##AM397244|ROMO1|140823|reactive oxygen species modulator 1##BC008488|ROMO1|140823|reactive oxygen species modulator 1##AM397246|ROMO1|140823|reactive oxygen species modulator 1##L10911|RBM39|9584|RNA binding motif protein 39##BC107886|RBM39|9584|RNA binding motif protein 39##L10910|RBM39|9584|RNA binding motif protein 39##BC131543|RBM39|9584|RNA binding motif protein 39	0.830069	CTCF.p2:-3:0.830
chr5	17258036	17258211	reg1026760.p1	4.579	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-40283	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-40511	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-321738	-	AK295087 BC031051 NM_001167667 NM_004934	2730199	-	TSC_hg19_v1_chr5_+_21459621 AK290693	4201486	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	4201525	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.0	
chr8	8610754	8610849	reg1023878.p2	4.579	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	-51103	+	AK122582 NM_001080826	-371579	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-434913	-	TSC_hg19_v1_chr8_-_8751060 NM_004225	140137	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	249564	+	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	249704	+	AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1	0.0	
chr11	47395710	47395890	reg1003539.p2	4.578	+	BC136543 BC136546 X84075 BC142685 BC151211 AK291569 AK297843 EF560722 EU747718 EU747719 NM_000256 TSC_hg19_v1_chr11_-_47374254	-21563	-	TSC_hg19_v1_chr11_+_47291683 NM_001135943 NM_130475 NM_130476 BC040484 AB002356 U44953	-104082	+	TSC_hg19_v1_chr11_+_47291234 NM_001135944 NM_003682 NM_130471 NM_130472 NM_130473 NM_130474 AF440100 AF440101 AF440102 AF440103 AF440434 AK292442	-104587	+	AB464244 TSC_hg19_v1_chr11_-_47399956	4142	-	TSC_hg19_v1_chr11_-_47400039 AK310065	4215	-	TSC_hg19_v1_chr11_-_47400097 X52056 NM_001080547 NM_003120	4311	-	BC136543|MYBPC3|4607|myosin binding protein C, cardiac##BC136546|MYBPC3|4607|myosin binding protein C, cardiac##X84075|MYBPC3|4607|myosin binding protein C, cardiac##BC142685|MYBPC3|4607|myosin binding protein C, cardiac##BC151211|MYBPC3|4607|myosin binding protein C, cardiac##AK291569|MYBPC3|4607|myosin binding protein C, cardiac##AK297843|MYBPC3|4607|myosin binding protein C, cardiac##EF560722|MYBPC3|4607|myosin binding protein C, cardiac##EU747718|MYBPC3|4607|myosin binding protein C, cardiac##EU747719|MYBPC3|4607|myosin binding protein C, cardiac##NM_000256|MYBPC3|4607|myosin binding protein C, cardiac##NM_001135943|MADD|8567|MAP-kinase activating death domain##NM_130475|MADD|8567|MAP-kinase activating death domain##NM_130476|MADD|8567|MAP-kinase activating death domain##BC040484|MADD|8567|MAP-kinase activating death domain##AB002356|MADD|8567|MAP-kinase activating death domain##U44953|MADD|8567|MAP-kinase activating death domain##NM_001135944|MADD|8567|MAP-kinase activating death domain##NM_003682|MADD|8567|MAP-kinase activating death domain##NM_130471|MADD|8567|MAP-kinase activating death domain##NM_130472|MADD|8567|MAP-kinase activating death domain##NM_130473|MADD|8567|MAP-kinase activating death domain##NM_130474|MADD|8567|MAP-kinase activating death domain##AF440100|MADD|8567|MAP-kinase activating death domain##AF440101|MADD|8567|MAP-kinase activating death domain##AF440102|MADD|8567|MAP-kinase activating death domain##AF440103|MADD|8567|MAP-kinase activating death domain##AF440434|MADD|8567|MAP-kinase activating death domain##AK292442|MADD|8567|MAP-kinase activating death domain##AK310065|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##X52056|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##NM_001080547|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1##NM_003120|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1	0.0	
chr11	64102751	64102850	reg1026251.p2	4.578	+	TSC_hg19_v1_chr11_+_64085676 AF124993 AF110731 BC113723 BC113725 BC143849 BC171733 AF112212 AF242525 AF231705 CR457203 HQ258129 AJ249483	-17078	+	BC110983 NM_012094 NM_181651 NM_181652 TSC_hg19_v1_chr11_+_64085600 AF197952	-17221	+	TSC_hg19_v1_chr11_-_64085009 AK312050 DQ892261 DQ895463 BC105294 BC029482 BC017172 AF161501 AF229068 NM_016404	-17779	-	TSC_hg19_v1_chr11_+_64107692 BC151218 BC151222 NM_032251 AK090436 BC140822 BC140824 BC141866	4902	+	TSC_hg19_v1_chr11_+_64120348 AK126728	17559	+	TSC_hg19_v1_chr11_+_64126642 AK223561 NM_001006944 NM_003942 AJ010119 AK292163 AK313567 BC047896 AK298507 BC028079 CU690526 AF074715	23931	+	AF124993|PRDX5|25824|peroxiredoxin 5##AF110731|PRDX5|25824|peroxiredoxin 5##BC113723|PRDX5|25824|peroxiredoxin 5##BC113725|PRDX5|25824|peroxiredoxin 5##BC143849|PRDX5|25824|peroxiredoxin 5##BC171733|PRDX5|25824|peroxiredoxin 5##AF112212|PRDX5|25824|peroxiredoxin 5##AF242525|PRDX5|25824|peroxiredoxin 5##AF231705|PRDX5|25824|peroxiredoxin 5##CR457203|PRDX5|25824|peroxiredoxin 5##HQ258129|PRDX5|25824|peroxiredoxin 5##AJ249483|PRDX5|25824|peroxiredoxin 5##BC110983|PRDX5|25824|peroxiredoxin 5##NM_012094|PRDX5|25824|peroxiredoxin 5##NM_181651|PRDX5|25824|peroxiredoxin 5##NM_181652|PRDX5|25824|peroxiredoxin 5##AF197952|PRDX5|25824|peroxiredoxin 5##AK312050|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ892261|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ895463|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC105294|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC029482|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC017172|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF161501|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF229068|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##NM_016404|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC151218|CCDC88B|283234|coiled-coil domain containing 88B##BC151222|CCDC88B|283234|coiled-coil domain containing 88B##NM_032251|CCDC88B|283234|coiled-coil domain containing 88B##AK090436|CCDC88B|283234|coiled-coil domain containing 88B##BC140822|CCDC88B|283234|coiled-coil domain containing 88B##BC140824|CCDC88B|283234|coiled-coil domain containing 88B##BC141866|CCDC88B|283234|coiled-coil domain containing 88B##AK126728|CCDC88B|283234|coiled-coil domain containing 88B##AK223561|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_001006944|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_003942|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AJ010119|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK292163|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK313567|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC047896|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK298507|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC028079|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AF074715|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4	0.0	
chr1	205180825	205180970	reg1031088.p2	4.578	+	TSC_hg19_v1_chr1_-_205180700 AY429674 BC060870 NM_015375 NM_199462	-178	-	TSC_hg19_v1_chr1_-_205180683 AB384485 AY208850 EU832787 GQ129280 BC072406 AK298011 BC117411 BC143603 BC053627	-224	-	TSC_hg19_v1_chr1_-_205091144 NM_001193272 NM_001193273 NM_005057	-89750	-	TSC_hg19_v1_chr1_+_205197073 AB007950 NM_014858 AK131419	16186	+	AK293734 NM_001242925	17161	+	AY358192 TSC_hg19_v1_chr1_+_205236667	55737	+	AY429674|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC060870|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_015375|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_199462|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AY208850|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##EU832787|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##GQ129280|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC072406|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AK298011|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC117411|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC143603|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC053627|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_001193272|RBBP5|5929|retinoblastoma binding protein 5##NM_001193273|RBBP5|5929|retinoblastoma binding protein 5##NM_005057|RBBP5|5929|retinoblastoma binding protein 5##AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK293734|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_001242925|TMCC2|9911|transmembrane and coiled-coil domain family 2##AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2	0.0	
chr12	55385307	55385488	reg1030634.p1	4.578	+	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	-6895	-	BC132732 BC132734 NM_001098815	-9776	-	NM_058173 AF414087 AY359062 BC111421 AY651259	-137065	+	NM_021191 AK314136	28373	+	BC136988 NM_001005243	138111	+	AB529271 NM_001005280	229411	+	AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1##NM_021191|NEUROD4|58158|neurogenic differentiation 4##AK314136|NEUROD4|58158|neurogenic differentiation 4##BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7	0.0	
chr16	85274992	85275140	reg1025538.p1	4.578	+	BC093665 BC111944 AK126284 NM_198491	-129012	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-213696	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-229937	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	369955	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	371887	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	447476	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.0	
chr16	88700198	88700378	reg1014885.p2	4.578	+	TSC_hg19_v1_chr16_+_88636880 BC050463	-63419	+	AK056632 AK225807 TSC_hg19_v1_chr16_+_88636823	-63460	+	AK300254 AK302716 TSC_hg19_v1_chr16_+_88636810	-63478	+	AF152099 AY358471 BC069410 NM_013278 BC101835 BC112196 AF142410	4715	+	AK097127 AK125578 AK300049 AK309030 TSC_hg19_v1_chr16_-_88717462 BT006861 DQ893235 DQ896565 AB590173 BC048338 BC033739 BC006465 BC011565 BC028224 M21186 NM_000101	17161	-	BT006930 AB527587 DQ890562 DQ893724 TSC_hg19_v1_chr16_-_88729519 NM_002461 U49260 AB209229 BC000011	29229	-	BC050463|ZC3H18|124245|zinc finger CCCH-type containing 18##AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18##AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18##AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18##AF152099|IL17C|27189|interleukin 17C##AY358471|IL17C|27189|interleukin 17C##BC069410|IL17C|27189|interleukin 17C##NM_013278|IL17C|27189|interleukin 17C##BC101835|IL17C|27189|interleukin 17C##BC112196|IL17C|27189|interleukin 17C##AK097127|CYBA|1535|cytochrome b-245, alpha polypeptide##AK300049|CYBA|1535|cytochrome b-245, alpha polypeptide##BT006861|CYBA|1535|cytochrome b-245, alpha polypeptide##DQ893235|CYBA|1535|cytochrome b-245, alpha polypeptide##DQ896565|CYBA|1535|cytochrome b-245, alpha polypeptide##BC033739|CYBA|1535|cytochrome b-245, alpha polypeptide##BC006465|CYBA|1535|cytochrome b-245, alpha polypeptide##BC011565|CYBA|1535|cytochrome b-245, alpha polypeptide##BC028224|CYBA|1535|cytochrome b-245, alpha polypeptide##M21186|CYBA|1535|cytochrome b-245, alpha polypeptide##NM_000101|CYBA|1535|cytochrome b-245, alpha polypeptide##BT006930|MVD|4597|mevalonate (diphospho) decarboxylase##DQ890562|MVD|4597|mevalonate (diphospho) decarboxylase##DQ893724|MVD|4597|mevalonate (diphospho) decarboxylase##NM_002461|MVD|4597|mevalonate (diphospho) decarboxylase##U49260|MVD|4597|mevalonate (diphospho) decarboxylase##AB209229|MVD|4597|mevalonate (diphospho) decarboxylase##BC000011|MVD|4597|mevalonate (diphospho) decarboxylase	0.066297	
chr20	48227281	48227399	reg1000218.p1	4.578	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	-42651	-	BC110572 BC110573 NM_004975	-128161	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-332145	+	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	102890	-	AB004550 TSC_hg19_v1_chr20_-_48330359	103016	-	TSC_hg19_v1_chr20_-_48330471 NM_004776	103126	-	AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.283684	CTCF.p2:106:0.259
chr20	53285203	53285348	reg1030457.p1	4.578	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-193061	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	-460638	+	TSC_hg19_v1_chr20_+_52824396 NM_002623	-460828	+	NM_080617	1294736	-	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	1538512	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	1648749	+	BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##NM_002623|PFDN4|5203|prefoldin subunit 4##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B	0.997603	CTCF.p2:1:0.998
chr6	53593516	53593632	reg1030886.p1	4.578	+	EF633513 NM_001003760	-63069	-	TSC_hg19_v1_chr6_-_53409900 AK304288 NM_001197115 NM_001498	-183663	-	TSC_hg19_v1_chr6_-_53409836 AK313480	-183739	-	TSC_hg19_v1_chr6_+_53659294 AK021896	65726	+	TSC_hg19_v1_chr6_+_53659776 BC003193 NM_018214	66185	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	66357	+	EF633513|KLHL31|401265|kelch-like 31 (Drosophila)##NM_001003760|KLHL31|401265|kelch-like 31 (Drosophila)##AK304288|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001197115|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001498|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK313480|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK021896|LRRC1|55227|leucine rich repeat containing 1##BC003193|LRRC1|55227|leucine rich repeat containing 1##NM_018214|LRRC1|55227|leucine rich repeat containing 1##AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1	0.950216	CTCF.p2:-1:0.950
chr12	13356023	13356174	reg1036416.p1	4.577	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-6369	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-6381	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-6460	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	776888	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	1162537	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	1182174	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.970753	CTCF.p2:0:0.971
chr13	44448764	44448874	reg1029677.p1	4.577	+	TSC_hg19_v1_chr13_-_44361107 BC068521 NM_001242863 NM_017993	-87736	-	BC024178 NM_001127615	-245209	-	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	-851117	+	NM_001128303	4600	+	NM_144974 AK056408	5006	-	AK096044 NM_153218 TSC_hg19_v1_chr13_+_44453986 BC035749	5187	+	BC068521|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001242863|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_017993|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC024178|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001127615|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122##AK096044|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_153218|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC035749|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1	0.864104	CTCF.p2:15:0.864
chr1	35384838	35384927	reg1022910.p2	4.577	+	NM_001080418 AB527430	-13898	-	BC141907 TSC_hg19_v1_chr1_+_35331580	-53325	+	BX648912 BC107421 NM_001164825 TSC_hg19_v1_chr1_-_35325339 BC011880 BC073851 AK074853 BC064320 NM_138428	-59507	-	TSC_hg19_v1_chr1_-_35450919 CU688652 BC042172 BC029439	66028	-	TSC_hg19_v1_chr1_-_35450927 AK129824	66043	-	TSC_hg19_v1_chr1_-_35450928 NM_001195156	66057	-	NM_001080418|DLGAP3|58512|discs, large (Drosophila) homolog-associated protein 3##BX648912|C1orf212|113444|chromosome 1 open reading frame 212##BC107421|C1orf212|113444|chromosome 1 open reading frame 212##NM_001164825|C1orf212|113444|chromosome 1 open reading frame 212##BC011880|C1orf212|113444|chromosome 1 open reading frame 212##BC073851|C1orf212|113444|chromosome 1 open reading frame 212##AK074853|C1orf212|113444|chromosome 1 open reading frame 212##BC064320|C1orf212|113444|chromosome 1 open reading frame 212##NM_138428|C1orf212|113444|chromosome 1 open reading frame 212##BC029439|ZMYM6NB|100506144|ZMYM6 neighbor##AK129824|ZMYM6NB|100506144|ZMYM6 neighbor##NM_001195156|ZMYM6NB|100506144|ZMYM6 neighbor	0.092191	
chr8	18671802	18671923	reg1027583.p1	4.577	+	AB463178 BC045112 AB023159 NM_206909	-5513	-	EU832144 EU832237 AK296546 BX647320 BX647406 TSC_hg19_v1_chr8_-_18541614	-130330	-	D90042 NM_000015 BC067218 BC015878 D90040 AJ581144	-423074	+	GU727648 TSC_hg19_v1_chr8_-_18871128	199250	-	TSC_hg19_v1_chr8_-_18871214 AK091317 AX746913 NM_015310	199424	-	TSC_hg19_v1_chr8_+_19171505 NM_001174160 NM_022071 AK024799 AK293301 BC082982 NM_001174159	499421	+	BC045112|PSD3|23362|pleckstrin and Sec7 domain containing 3##AB023159|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_206909|PSD3|23362|pleckstrin and Sec7 domain containing 3##EU832144|PSD3|23362|pleckstrin and Sec7 domain containing 3##EU832237|PSD3|23362|pleckstrin and Sec7 domain containing 3##AK296546|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX647320|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX647406|PSD3|23362|pleckstrin and Sec7 domain containing 3##D90042|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##NM_000015|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC067218|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##BC015878|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##D90040|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##AJ581144|NAT2|10|N-acetyltransferase 2 (arylamine N-acetyltransferase)##GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3##AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_001174160|SH2D4A|63898|SH2 domain containing 4A##NM_022071|SH2D4A|63898|SH2 domain containing 4A##AK024799|SH2D4A|63898|SH2 domain containing 4A##AK293301|SH2D4A|63898|SH2 domain containing 4A##BC082982|SH2D4A|63898|SH2 domain containing 4A##NM_001174159|SH2D4A|63898|SH2 domain containing 4A	0.98586	CTCF.p2:-36:0.986
chr11	122781620	122781774	reg1034806.p1	4.576	+	AK097534 BC068507 NM_024806 NM_199124	-28266	+	BC070266 AK313578 AF001622 NM_019604	-72468	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	-255150	+	AB231738 NM_001098169	70659	-	AB034951 BC016179 BC016660 BC019816 AF352832 TSC_hg19_v1_chr11_-_122932842 AK222628 AK222785 AK096100 AK129885 AK303935	151127	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	151182	-	AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox##AB034951|HSPA8|3312|heat shock 70kDa protein 8##BC016179|HSPA8|3312|heat shock 70kDa protein 8##BC016660|HSPA8|3312|heat shock 70kDa protein 8##BC019816|HSPA8|3312|heat shock 70kDa protein 8##AF352832|HSPA8|3312|heat shock 70kDa protein 8##AK222628|HSPA8|3312|heat shock 70kDa protein 8##AK222785|HSPA8|3312|heat shock 70kDa protein 8##AK096100|HSPA8|3312|heat shock 70kDa protein 8##AK129885|HSPA8|3312|heat shock 70kDa protein 8##AK303935|HSPA8|3312|heat shock 70kDa protein 8##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8	0.53136	CTCF.p2:-13:0.531
chr11	3915674	3915753	reg1022969.p2	4.576	+	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	-38784	+	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	-53514	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	-53558	-	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	200276	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	200353	+	TSC_hg19_v1_chr11_+_4116085 AK297988 BC006498 CU675435 DQ893028 DQ896272	200446	+	NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1##X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1##AK297988|RRM1|6240|ribonucleotide reductase M1##BC006498|RRM1|6240|ribonucleotide reductase M1##DQ893028|RRM1|6240|ribonucleotide reductase M1##DQ896272|RRM1|6240|ribonucleotide reductase M1	0.0	
chr12	5551699	5551813	reg1028030.p1	4.576	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	-10480	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	-398637	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	-532696	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	51582	+	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	502718	-	AJ272204 NM_020373	503641	-	AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2	0.994278	CTCF.p2:7:0.994
chr14	83466318	83466416	reg1026585.p1	4.576	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-1466140	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-1466219	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-1601541	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	2530106	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	2530174	+	TSC_hg19_v1_chr14_+_85999692 AK297248	2533218	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.9905	CTCF.p2:-9:0.991
chr15	39872291	39872439	reg1001019.p1	4.576	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	-329440	+	AK093014 AX747856 BC119016 BC119810 NM_207444	-883567	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-1015434	-	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	964	+	AK093308 AX748045 BC045191 NM_152597	202663	-	AK091251 TSC_hg19_v1_chr15_+_40075106	202741	+	BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1	0.0	
chr15	40339883	40340064	reg1030107.p1	4.576	+	TSC_hg19_v1_chr15_+_40331506 AK127696	-8495	+	AB451391 CU690086 TSC_hg19_v1_chr15_-_40331370 X73459 BC071716 U07857 BC100031 BC035495 BC051006 AB061546 NM_003134	-8621	-	TSC_hg19_v1_chr15_+_40294764 AK074361	-45177	+	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	58313	-	BC104983 BC104985 BC069328 BC069505 NM_033503 AK024472	58637	-	TSC_hg19_v1_chr15_-_40401076 BC060783 BC070043 NM_001003940	61122	-	AK127696|LOC100131089|100131089|uncharacterized LOC100131089##AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AK074361|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor##BC104983|BMF|90427|Bcl2 modifying factor##BC104985|BMF|90427|Bcl2 modifying factor##BC069328|BMF|90427|Bcl2 modifying factor##BC069505|BMF|90427|Bcl2 modifying factor##NM_033503|BMF|90427|Bcl2 modifying factor##AK024472|BMF|90427|Bcl2 modifying factor##BC060783|BMF|90427|Bcl2 modifying factor##BC070043|BMF|90427|Bcl2 modifying factor##NM_001003940|BMF|90427|Bcl2 modifying factor	0.0	
chr18	44098563	44098666	reg1030352.p1	4.576	+	AK091537 AK122819 AK127467 AX747044 NM_152470	-184428	+	TSC_hg19_v1_chr18_+_43913942 AK055997	-184682	+	TSC_hg19_v1_chr18_+_43754065 AK289738	-344532	+	AK057232 BC047720 NM_001145473 NM_001173129	426	-	BC041860 AK302484 NM_001145472	40646	-	NM_144612	138381	-	AK091537|RNF165-IT1|147341|RNF165 intronic transcript 1 (non-protein coding)##AK122819|RNF165|494470|ring finger protein 165##AK127467|RNF165|494470|ring finger protein 165##NM_152470|RNF165|494470|ring finger protein 165##AK055997|RNF165|494470|ring finger protein 165##AK289738|C18orf25|147339|chromosome 18 open reading frame 25##AK057232|LOXHD1|125336|lipoxygenase homology domains 1##BC047720|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145473|LOXHD1|125336|lipoxygenase homology domains 1##NM_001173129|LOXHD1|125336|lipoxygenase homology domains 1##BC041860|LOXHD1|125336|lipoxygenase homology domains 1##AK302484|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145472|LOXHD1|125336|lipoxygenase homology domains 1##NM_144612|LOXHD1|125336|lipoxygenase homology domains 1	0.973366	CTCF.p2:-16:0.963
chr3	58097313	58097494	reg1029396.p1	4.576	+	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	-103256	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-354201	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-418664	-	NM_004944	102994	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	125880	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	126127	+	AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6	0.0	
chr6	125080651	125080782	reg1031435.p2	4.576	+	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	-955512	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	-1122627	-	BC101377 BC101376 NM_001010852	-1763136	+	AK093417 AX748113 BC026087 NM_152553	223795	+	TSC_hg19_v1_chr6_+_125474909 NM_001003396 NM_001003397 NM_003287 AK291866 U44427 BC002375 AK291872 AF208012 AK291887	394223	+	AK124817 NM_001003395	394660	+	NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217##NM_001003396|TPD52L1|7164|tumor protein D52-like 1##NM_001003397|TPD52L1|7164|tumor protein D52-like 1##NM_003287|TPD52L1|7164|tumor protein D52-like 1##AK291866|TPD52L1|7164|tumor protein D52-like 1##U44427|TPD52L1|7164|tumor protein D52-like 1##BC002375|TPD52L1|7164|tumor protein D52-like 1##AK291872|TPD52L1|7164|tumor protein D52-like 1##AF208012|TPD52L1|7164|tumor protein D52-like 1##AK291887|TPD52L1|7164|tumor protein D52-like 1##AK124817|TPD52L1|7164|tumor protein D52-like 1##NM_001003395|TPD52L1|7164|tumor protein D52-like 1	0.0	
chr1	157317451	157317539	reg1030224.p1	4.575	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-209212	-	TSC_hg19_v1_chr1_-_157108158 L16464	-209345	-	AK131392 NM_001004341	-247896	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	204735	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	250306	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	353032	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.982665	CTCF.p2:6:0.945	CTCF.p2:-108:0.237
chr1	196342228	196342341	reg1036619.p1	4.575	+	AF288390 BC022507 NM_003783	-3186552	-	TSC_hg19_v1_chr1_+_193091308 BC007325 AF312865 AK314772 AB590625 CU688012 EU831787 EU831865 BC011808	-3250928	+	TSC_hg19_v1_chr1_+_193091242 AK300929 BC065037	-3251045	+	EU251076 BC103947 BC103948 BC103949 BC103950 AY359444 NM_198503 BX647852 AK309729 TSC_hg19_v1_chr1_-_196577612	235241	-	TSC_hg19_v1_chr1_-_196577676 AK131498	235398	-	NM_000186 NM_001014975 TSC_hg19_v1_chr1_+_196621172 AK291395 AK225649 X07523 Y00716 BC037285 BC012610 BC110643 BC073982 BC142699 CU691466	278843	+	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC007325|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF312865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK314772|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831787|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK300929|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC065037|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU251076|KCNT2|343450|potassium channel, subfamily T, member 2##BC103947|KCNT2|343450|potassium channel, subfamily T, member 2##BC103948|KCNT2|343450|potassium channel, subfamily T, member 2##BC103949|KCNT2|343450|potassium channel, subfamily T, member 2##BC103950|KCNT2|343450|potassium channel, subfamily T, member 2##AY359444|KCNT2|343450|potassium channel, subfamily T, member 2##NM_198503|KCNT2|343450|potassium channel, subfamily T, member 2##BX647852|KCNT2|343450|potassium channel, subfamily T, member 2##AK309729|KCNT2|343450|potassium channel, subfamily T, member 2##AK131498|KCNT2|343450|potassium channel, subfamily T, member 2##NM_000186|CFH|3075|complement factor H##NM_001014975|CFH|3075|complement factor H##AK291395|CFH|3075|complement factor H##AK225649|CFH|3075|complement factor H##X07523|CFH|3075|complement factor H##Y00716|CFH|3075|complement factor H##BC037285|CFH|3075|complement factor H##BC012610|CFH|3075|complement factor H##BC110643|CFH|3075|complement factor H##BC073982|CFH|3075|complement factor H##BC142699|CFH|3075|complement factor H	0.984408	CTCF.p2:-7:0.984
chr1	28501718	28501816	reg1027476.p1	4.575	+	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-86643	-	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-215249	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-240206	+	NM_000952 NM_001164723	1687	-	S52624 AK292053 NM_001164721 NM_001164722	18645	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	57764	-	BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8	0.013405	
chr19	11079523	11079651	reg1024621.p2	4.575	+	TSC_hg19_v1_chr19_+_11071823 NM_001128849 U29175 D26156	-7763	+	TSC_hg19_v1_chr19_+_11071720 BC035916	-7837	+	TSC_hg19_v1_chr19_+_11071717 BC007302	-7872	+	BC136644 AB590582 BC151849 EU430756 EU430757 EU430758 EU430759 NM_001128845 NM_001128846 NM_001128847 NM_001128848 AB209313	15289	+	NM_000527 NM_001195798 NM_001195799 NM_001195800 NM_001195802 NM_001195803 TSC_hg19_v1_chr19_+_11200115	120490	+	TSC_hg19_v1_chr19_+_11200138 AK295612 AK296312 AK299038 AK300313	120545	+	NM_001128849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##U29175|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##D26156|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC136644|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC151849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430756|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430757|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430758|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430759|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128845|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128846|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128847|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128848|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##AB209313|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_000527|LDLR|3949|low density lipoprotein receptor##NM_001195798|LDLR|3949|low density lipoprotein receptor##NM_001195799|LDLR|3949|low density lipoprotein receptor##NM_001195800|LDLR|3949|low density lipoprotein receptor##NM_001195802|LDLR|3949|low density lipoprotein receptor##NM_001195803|LDLR|3949|low density lipoprotein receptor##AK295612|LDLR|3949|low density lipoprotein receptor##AK296312|LDLR|3949|low density lipoprotein receptor##AK299038|LDLR|3949|low density lipoprotein receptor##AK300313|LDLR|3949|low density lipoprotein receptor	0.219967	CTCF.p2:14:0.220
chr3	31652316	31652471	reg1029862.p1	4.575	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	-77911	+	TSC_hg19_v1_chr3_+_31574468 AK074587	-77944	+	TSC_hg19_v1_chr3_+_31574119 AK311488	-78263	+	TSC_hg19_v1_chr3_-_32022751 BC003168 AF346291 AK304067 AK097503	370376	-	AK294003 NM_001137674	370872	+	AF392451 NM_001174060 NM_017784	370896	-	AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##BC003168|OSBPL10|114884|oxysterol binding protein-like 10##AF346291|OSBPL10|114884|oxysterol binding protein-like 10##AK304067|OSBPL10|114884|oxysterol binding protein-like 10##AK294003|ZNF860|344787|zinc finger protein 860##NM_001137674|ZNF860|344787|zinc finger protein 860##AF392451|OSBPL10|114884|oxysterol binding protein-like 10##NM_001174060|OSBPL10|114884|oxysterol binding protein-like 10##NM_017784|OSBPL10|114884|oxysterol binding protein-like 10	0.789714	CTCF.p2:-2:0.790
chr6_ssto_hap7	2122055	2122190	reg1030384.p1	4.575	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.997496	CTCF.p2:12:0.997
chr7	64407273	64407381	reg1030542.p1	4.575	+	NM_021148 BC007078 BC019234 BC008386 BC063818 BC108740	-43668	+	AK090648 AX746558 TSC_hg19_v1_chr7_+_64342925	-64425	+	TSC_hg19_v1_chr7_+_64254799 NM_001160183 NM_006524 AK294302 AK298230 AK055644 BC141847 BC037426	-152512	+	M55422 NM_015852	44086	-	TSC_hg19_v1_chr7_-_64467066 AK295189 AK097499 NM_001007253	59737	-	TSC_hg19_v1_chr7_+_64498727 BX649060 BC071617	91379	+	NM_021148|ZNF273|10793|zinc finger protein 273##BC007078|ZNF273|10793|zinc finger protein 273##BC019234|ZNF273|10793|zinc finger protein 273##BC008386|ZNF273|10793|zinc finger protein 273##BC063818|ZNF273|10793|zinc finger protein 273##BC108740|ZNF273|10793|zinc finger protein 273##AK090648|ZNF273|10793|zinc finger protein 273##NM_001160183|ZNF138|7697|zinc finger protein 138##NM_006524|ZNF138|7697|zinc finger protein 138##AK294302|ZNF138|7697|zinc finger protein 138##AK298230|ZNF138|7697|zinc finger protein 138##AK055644|ZNF138|7697|zinc finger protein 138##BC141847|ZNF138|7697|zinc finger protein 138##BC037426|ZNF138|7697|zinc finger protein 138##M55422|ZNF117|51351|zinc finger protein 117##NM_015852|ZNF117|51351|zinc finger protein 117##AK295189|ERV3-1|2086|endogenous retrovirus group 3, member 1##NM_001007253|ERV3-1|2086|endogenous retrovirus group 3, member 1##BX649060|CCT6P3|643180|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 3##BC071617|CCT6P3|643180|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 3	0.997704	CTCF.p2:12:0.998
chr13	33754073	33754169	reg1030346.p1	4.574	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-163598	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-593438	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-593482	+	AY082590 BC046563 NM_001243466 NM_178007	6094	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	26043	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	105746	-	AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr14	31889686	31889791	reg1026197.p1	4.574	+	TSC_hg19_v1_chr14_-_31676920 BC016947	-212803	-	TSC_hg19_v1_chr14_-_31676690 NM_015382	-213053	-	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	-394168	-	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	23	-	TSC_hg19_v1_chr14_-_31926633 BC010618 AK302829 AK055367 NM_080664	36937	-	GQ981321 GQ981322 NM_001197184	67412	-	NM_015382|HECTD1|25831|HECT domain containing 1##BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3##BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A##BC010618|C14orf126|112487|chromosome 14 open reading frame 126##AK055367|C14orf126|112487|chromosome 14 open reading frame 126##NM_080664|C14orf126|112487|chromosome 14 open reading frame 126##GQ981321|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##GQ981322|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##NM_001197184|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)	0.0	
chr20	52556309	52556468	reg1002424.p1	4.574	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-345589	-	AF041259 NM_006526	-356753	-	AK302570 NM_001193421	-754567	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	130674	-	AK315220 NM_003657	130915	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	234132	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr5	118670763	118670888	reg1028996.p1	4.574	+	AF070671 TSC_hg19_v1_chr5_+_118604523	-66308	+	NM_001077654 TSC_hg19_v1_chr5_+_118604492 AK097884 AK001931	-66367	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	-263660	+	BC007014 NM_014350 BC005352 TSC_hg19_v1_chr5_+_118691687	20793	+	TSC_hg19_v1_chr5_+_118691713 AF099935 AK001850 AF099936 CU675493	20913	+	TSC_hg19_v1_chr5_+_118788215 NM_000414 NM_001199292 AK301212 AK312449 NM_001199291 BC003098 AK293254 AB208932 X87176 AK299685 AK298075 CU678374 DQ891866 DQ895055	117371	+	AF070671|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_001077654|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK097884|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001931|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1##BC007014|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_014350|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC005352|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099935|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001850|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099936|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_000414|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199292|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK301212|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK312449|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199291|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC003098|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK293254|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##X87176|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK299685|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK298075|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ891866|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ895055|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4	0.985027	CTCF.p2:36:0.985
chr6	1063188	1063321	reg1025325.p1	4.574	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-370164	-	AF508547 BC101697 BC101699 NM_148959	-406301	-	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-671490	+	BC053850 NM_033260	249420	+	NM_001452 U13220 AB463646	326871	+	BC134421 NM_001453	547426	+	AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1	0.029645	
chr6	3023968	3024132	reg1029482.p1	4.574	+	TSC_hg19_v1_chr6_+_3000111 NM_000904 AK311746 AK056981 J02888	-23922	+	AK094983 NM_001195291 NM_004568	-51652	-	TSC_hg19_v1_chr6_-_2971981 AK314578	-52001	-	AK314176 TSC_hg19_v1_chr6_+_3064200 AB208926	40116	+	BC126254 BC126256 HQ258488 NM_003804 U50062 AK304701	53014	+	TSC_hg19_v1_chr6_+_3118961 AK297518 NM_004332 AK314909 AL832502 AJ617684 X81372	94901	+	NM_000904|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK311746|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK056981|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##J02888|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK094983|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_001195291|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_004568|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314578|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314176|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AB208926|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK297518|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##NM_004332|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AK314909|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AL832502|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AJ617684|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##X81372|BPHL|670|biphenyl hydrolase-like (serine hydrolase)	0.0	
chr9	35617211	35617336	reg1023785.p2	4.574	+	DQ893327 DQ896643 BC037561 AK298907 TSC_hg19_v1_chr9_+_35605808	-11562	+	TSC_hg19_v1_chr9_+_35605468 BC011799	-11789	+	TSC_hg19_v1_chr9_+_35605339 D50863	-11913	+	CU688854 BC011734 BC030227 AK309268 AK307305 AK310093 AK310685 M54992 AF283777 NM_001782	1088	-	TSC_hg19_v1_chr9_-_35646809 DQ174771 AK311283	29554	-	AB527705 TSC_hg19_v1_chr9_-_35650929 AK314758 AJ010059 BC102029 BC104491 BC107484 NM_014450	33626	-	DQ893327|TESK1|7016|testis-specific kinase 1##DQ896643|TESK1|7016|testis-specific kinase 1##BC037561|TESK1|7016|testis-specific kinase 1##AK298907|TESK1|7016|testis-specific kinase 1##BC011799|TESK1|7016|testis-specific kinase 1##D50863|TESK1|7016|testis-specific kinase 1##BC011734|CD72|971|CD72 molecule##BC030227|CD72|971|CD72 molecule##AK309268|CD72|971|CD72 molecule##AK307305|CD72|971|CD72 molecule##AK310093|CD72|971|CD72 molecule##AK310685|CD72|971|CD72 molecule##M54992|CD72|971|CD72 molecule##AF283777|CD72|971|CD72 molecule##NM_001782|CD72|971|CD72 molecule##DQ174771|CD72|971|CD72 molecule##AK311283|CD72|971|CD72 molecule##AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1	0.0	
chr10	12527126	12527307	reg1015772.p1	4.573	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-135439	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-135499	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	-135641	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	516483	-	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	614929	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	676352	+	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10	0.0	
chr14	50017672	50017778	reg1032355.p1	4.573	+	AK309211 NM_001113498	-1873569	-	BC028193 NM_182830	-2205310	-	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	-2896742	-	BC032813 BC035313 L31610 U14973 AK026649 BC015974 NM_001030001 NM_001032 AB055780 AK307833 TSC_hg19_v1_chr14_-_50053095	35368	-	NM_152329 NM_203467 TSC_hg19_v1_chr14_+_50065473 BC030142 BX648029	47735	+	TSC_hg19_v1_chr14_-_50087339 BC003145 BC000741 BC070207 AK311959 AB063609 NM_001001 BC107716	69619	-	AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC032813|RPS29|6235|ribosomal protein S29##BC035313|RPS29|6235|ribosomal protein S29##L31610|RPS29|6235|ribosomal protein S29##U14973|RPS29|6235|ribosomal protein S29##AK026649|RPS29|6235|ribosomal protein S29##BC015974|RPS29|6235|ribosomal protein S29##NM_001030001|RPS29|6235|ribosomal protein S29##NM_001032|RPS29|6235|ribosomal protein S29##AB055780|RPS29|6235|ribosomal protein S29##NM_152329|LRR1|122769|leucine rich repeat protein 1##NM_203467|LRR1|122769|leucine rich repeat protein 1##BC030142|LRR1|122769|leucine rich repeat protein 1##BX648029|LRR1|122769|leucine rich repeat protein 1##BC003145|RPL36AL|6166|ribosomal protein L36a-like##BC000741|RPL36AL|6166|ribosomal protein L36a-like##BC070207|RPL36AL|6166|ribosomal protein L36a-like##AK311959|RPL36AL|6166|ribosomal protein L36a-like##AB063609|RPL36AL|6166|ribosomal protein L36a-like##NM_001001|RPL36AL|6166|ribosomal protein L36a-like##BC107716|RPL36AL|6166|ribosomal protein L36a-like	0.0	
chr16	5552481	5552618	reg1029340.p1	4.573	+	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	-404781	-	NM_019109 TSC_hg19_v1_chr16_+_5121825 AK075373 BC031095 AB019038 BC004402 AK311475 CU678708 DQ895010 EU176309	-430719	+	TSC_hg19_v1_chr16_-_5116030 BC033681 AY358483 NM_001098514 NM_152459	-436462	-	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	516676	+	TSC_hg19_v1_chr16_+_6533765 BC033885	981226	+	AK001027 NM_001142334	1271260	+	BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##NM_019109|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK075373|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC031095|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AB019038|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC004402|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK311475|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##DQ895010|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##EU176309|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC033681|C16orf89|146556|chromosome 16 open reading frame 89##AY358483|C16orf89|146556|chromosome 16 open reading frame 89##NM_001098514|C16orf89|146556|chromosome 16 open reading frame 89##NM_152459|C16orf89|146556|chromosome 16 open reading frame 89##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	0.69655	CTCF.p2:-1:0.604
chr20	25604812	25604920	reg1028649.p1	4.573	+	BC034569 TSC_hg19_v1_chr20_+_25604757	-147	+	EU831914 EU832008 TSC_hg19_v1_chr20_-_25604651 BC022552 AK055472 AL833116 NM_152667	-248	-	TSC_hg19_v1_chr20_-_25566168 AB023197 EU718622 NM_025176 AK309298	-38699	-	TSC_hg19_v1_chr20_-_25677490 AK056184 BC021298 NM_015655 AK291235	72493	-	TSC_hg19_v1_chr20_-_26189755 BC036544	584945	-	TSC_hg19_v1_chr20_+_29611882 BC062724 BC062743 AK307061 BC095491 AK057099	4007059	+	BC034569|ZNF337|26152|zinc finger protein 337##EU831914|NANP|140838|N-acetylneuraminic acid phosphatase##EU832008|NANP|140838|N-acetylneuraminic acid phosphatase##BC022552|NANP|140838|N-acetylneuraminic acid phosphatase##AK055472|NANP|140838|N-acetylneuraminic acid phosphatase##AL833116|NANP|140838|N-acetylneuraminic acid phosphatase##NM_152667|NANP|140838|N-acetylneuraminic acid phosphatase##AB023197|NINL|22981|ninein-like##EU718622|NINL|22981|ninein-like##NM_025176|NINL|22981|ninein-like##AK309298|NINL|22981|ninein-like##AK056184|ZNF337|26152|zinc finger protein 337##BC021298|ZNF337|26152|zinc finger protein 337##NM_015655|ZNF337|26152|zinc finger protein 337##AK291235|ZNF337|26152|zinc finger protein 337##BC036544|LOC284801|284801|uncharacterized LOC284801##BC062724|FRG1B|284802|FSHD region gene 1 family, member B##BC062743|FRG1B|284802|FSHD region gene 1 family, member B##BC095491|FRG1B|284802|FSHD region gene 1 family, member B##AK057099|LOC642236|642236|FSHD region gene 1 pseudogene	0.0	
chr2	160534325	160534436	reg1031471.p1	4.573	+	BX647250 AL834381 TSC_hg19_v1_chr2_-_160473021 NM_013450 AB040909	-61361	-	AK127551 BC107570 TSC_hg19_v1_chr2_-_160472070	-62366	-	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	-391232	-	TSC_hg19_v1_chr2_-_160568946 BX641037 BX537650	34526	-	TSC_hg19_v1_chr2_+_160569016 AK292836 AK299051 AK022973 NM_022826 AK222880	34615	+	TSC_hg19_v1_chr2_+_160569027 BC065014	34660	+	BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BX641037|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AK292836|MARCH7|64844|membrane-associated ring finger (C3HC4) 7##AK299051|MARCH7|64844|membrane-associated ring finger (C3HC4) 7##AK022973|MARCH7|64844|membrane-associated ring finger (C3HC4) 7##NM_022826|MARCH7|64844|membrane-associated ring finger (C3HC4) 7##AK222880|MARCH7|64844|membrane-associated ring finger (C3HC4) 7##BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7	0.304908	CTCF.p2:35:0.305
chr2	90451471	90451574	reg1013250.p2	4.573	+	TSC_hg19_v1_chr2_+_90211706 Z69013	-239804	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-373768	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-831669	-	TSC_hg19_v1_chr2_-_91847997 BC030764	1396481	-	AK097438 BC021716 NM_144705 AK296678 CU692394	5085728	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	5239960	+	BC070334|IGKC|3514|immunoglobulin kappa constant##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein	0.0	
chr5	11062535	11062654	reg1029807.p1	4.573	+	TSC_hg19_v1_chr5_-_10761361 NM_004394	-301195	-	TSC_hg19_v1_chr5_-_10761341 BC002726	-301252	-	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	-301335	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	841442	-	TSC_hg19_v1_chr5_-_11904184 AK296232	841590	-	AX800026 AY045575 NM_001369	2881994	-	NM_004394|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5	0.0	
chr7	128523932	128524113	reg1005982.p2	4.573	+	NM_001195150	-17559	+	TSC_hg19_v1_chr7_+_128502927 CR456896	-21080	+	NM_001198909 NM_004231 BC107854 TSC_hg19_v1_chr7_+_128502909 BC104230 BC104231 D49400 AK312214	-21132	+	TSC_hg19_v1_chr7_-_128543406 AK095464	19379	-	TSC_hg19_v1_chr7_-_128550763 AK122706 NM_001135914 NM_199349	26744	-	AK293654 AY693665 AY693668 NM_001098629 NM_001098630 NM_001242452 DQ995492 U51127 AK297083 AY504947 AY693666 AY693667 EU258896	54014	+	NM_001195150|LOC100130705|100130705|uncharacterized LOC100130705##CR456896|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##NM_001198909|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##NM_004231|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC107854|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC104230|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##BC104231|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##D49400|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##AK312214|ATP6V1F|9296|ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F##AK095464|KCP|375616|kielin/chordin-like protein##AK122706|KCP|375616|kielin/chordin-like protein##NM_001135914|KCP|375616|kielin/chordin-like protein##NM_199349|KCP|375616|kielin/chordin-like protein##AK293654|IRF5|3663|interferon regulatory factor 5##AY693665|IRF5|3663|interferon regulatory factor 5##AY693668|IRF5|3663|interferon regulatory factor 5##NM_001098629|IRF5|3663|interferon regulatory factor 5##NM_001098630|IRF5|3663|interferon regulatory factor 5##NM_001242452|IRF5|3663|interferon regulatory factor 5##DQ995492|IRF5|3663|interferon regulatory factor 5##U51127|IRF5|3663|interferon regulatory factor 5##AK297083|IRF5|3663|interferon regulatory factor 5##AY504947|IRF5|3663|interferon regulatory factor 5##AY693666|IRF5|3663|interferon regulatory factor 5##AY693667|IRF5|3663|interferon regulatory factor 5##EU258896|IRF5|3663|interferon regulatory factor 5	0.057265	
chr7	151456624	151456730	reg1009280.p1	4.573	+	TSC_hg19_v1_chr7_-_151329284 BT007127 BC020540 AB025580 AF087875 AK314646 AK001887 NM_024429	-127397	-	TSC_hg19_v1_chr7_-_151216982 BC107705 AK125446 BC016155 NM_005614	-239692	-	TSC_hg19_v1_chr7_-_151216769 BC066307	-239908	-	BC068598 TSC_hg19_v1_chr7_-_151511929 NM_001040633	55263	-	AK074675 NM_016203	117585	-	NM_145292 AF440404 AK315667 AK093091 AX747915 BC022021 AF440400 BC025391	196821	+	BT007127|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC020540|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AB025580|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AF087875|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK314646|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK001887|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_024429|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC107705|RHEB|6009|Ras homolog enriched in brain##AK125446|RHEB|6009|Ras homolog enriched in brain##BC016155|RHEB|6009|Ras homolog enriched in brain##NM_005614|RHEB|6009|Ras homolog enriched in brain##BC066307|RHEB|6009|Ras homolog enriched in brain##BC068598|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_001040633|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK074675|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_016203|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_145292|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440404|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK315667|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK093091|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC022021|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440400|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC025391|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	0.0	
chr9	140653649	140653829	reg1031132.p1	4.573	+	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	-15210	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-140272	+	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	-140296	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	118495	+	TSC_hg19_v1_chr9_+_140918045 AB209467	264335	+	TSC_hg19_v1_chr9_+_141044539 AK308459	390812	+	AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AK308459|TUBBP5|643224|tubulin, beta pseudogene 5	0.0	
chr1	223899828	223900008	reg1005640.p1	4.572	+	AK316211 AK297800 NM_001146068	-10645	+	TSC_hg19_v1_chr1_-_223853404 NM_001143962	-46501	-	TSC_hg19_v1_chr1_-_223853364 BC157893	-46548	-	TSC_hg19_v1_chr1_+_223900093 BC007686 BC011828 NM_001748	199	+	M23254 TSC_hg19_v1_chr1_+_223900223 AK303952 AF261089 AK315179 BC021303	300	+	TSC_hg19_v1_chr1_+_223900240 AB209855	330	+	AK316211|CAPN2|824|calpain 2, (m/II) large subunit##AK297800|CAPN2|824|calpain 2, (m/II) large subunit##NM_001146068|CAPN2|824|calpain 2, (m/II) large subunit##NM_001143962|CAPN8|388743|calpain 8##BC157893|CAPN8|388743|calpain 8##BC007686|CAPN2|824|calpain 2, (m/II) large subunit##BC011828|CAPN2|824|calpain 2, (m/II) large subunit##NM_001748|CAPN2|824|calpain 2, (m/II) large subunit##M23254|CAPN2|824|calpain 2, (m/II) large subunit##AK303952|CAPN2|824|calpain 2, (m/II) large subunit##AF261089|CAPN2|824|calpain 2, (m/II) large subunit##AK315179|CAPN2|824|calpain 2, (m/II) large subunit##BC021303|CAPN2|824|calpain 2, (m/II) large subunit##AB209855|CAPN2|824|calpain 2, (m/II) large subunit	0.0	
chr13	100077952	100078133	reg1031998.p1	4.572	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-118344	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-167428	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-224923	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	75658	+	TSC_hg19_v1_chr13_+_100153777 BC130293	75740	+	BC041830 TSC_hg19_v1_chr13_+_100229390	151335	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.0	
chr14	107047867	107047978	reg1018913.p1	4.572	+	AF267786 AF460742 AF460743 DQ454547 DQ454549 DQ454453 DQ454546 DQ454587 DQ454772 DQ523855 DQ454644 GU552737 DQ454456 DQ454588 DQ454927 EU433863 DQ454420 DQ454430 DQ454879 DQ454417 DQ454704 DQ454916 DQ454924 DQ454969 GU552772 DQ454423 DQ455004 EU099273 GU552771 DQ454935 DQ523903 DQ454770 DQ454843 FJ840010 FJ840025 FJ840144 FJ840161 FJ840267 FJ840276 FJ840292 FJ840293 FJ840346 FJ840350 FJ840358 FJ840360 FJ840363 FJ873816 FJ873820 FJ873848 FJ873865 FJ873868 FJ873928 FJ873940 FJ873954 FJ873964 FJ873985 FJ874015 FJ874045 FJ874091 GQ232837 HM116178 HM116213 HM116223 AJ008166 EU433880 GQ232769 GQ232840 GQ232959 EF175426 FJ694889 EF441751 EF441753 AY998718 U44492 U44503 U44504 U44505 AF017462 AJ008170 AJ008172 AJ008178 AJ008203 AJ487495 AJ230634 AJ230635 AJ230636 AJ230637 AJ230638 AJ230640 AJ230641 AJ230642 AJ230643 AJ230644 AJ230646 AJ230649 AJ230652 AJ230655 AJ230656 AJ230657 M34028 AY577299 S73611 S73613 FJ385326 GQ232913 GQ232958 GU552732 GU552750 AM279543 AF085655 AF085656 EU099270 AM233802 AM233804 EU099059 EU099279 EU099288 GQ232907 AF209895 AF209899 AF211932 AF343357 AF343358 AF343374 AF343390 AF343395 AF343401 AF343405 AF343419 AF343420 U86784 AJ862553 AJ862555 AJ862556 AJ862558 AJ862559 AJ862560 AJ862561 AJ862562 AJ862563 AJ862564 AJ862566 AJ862569 AJ862573 AM233783 AM233785 AM233805 AM233806 AM233807 AM233841 AY062302 HM774009 HM996214 AF103038 EU099234 HM773977 HM774742 AY062301 HM773976 HM774100 HM774513 HM774833 HM775004 HQ704065 HQ704066 HQ704067 HQ704068 AF103039 HM774204 HM774915 JN110745 JN110851 JN111173 JN111174 JN111195 JN111203 JN111206 JN111213 L04327 L04331 FJ385346 FJ385432 HM774001 HM774101 HM774244 HM774256 HM774288 HM774294 HM774334 HM774417 HM774549 HM774581 HM774591 HM774745 HM774776 HM774778 HM774796 HM774808 HM774855 HM774958 HM774983 HQ704004 HQ704052 HM775063 Z46853 AF103177 DQ524149 EU146312 EU146344 EU146346 EU146382 AB067195 AF103056 AY393315 AY393569 AY393571 EU099233 AF306373 AJ580927 AY062322 AY376089 U70236 AY393249 AY393314 AY393316 AY393318 AY393319 AY393320 AY393321 AY393455 AY393456 AY393457 AY393458 AY393459 AY393463 AY393466 AY393471 AY393566 AY393567 AY393568 AY393570 AY393572 AY393573 EU099231 EU099232 M34022 U00574 AF110479 AY062303 DQ926264 DQ926266 DQ926273 AF129750 AM233827 AM233828 AM233830 AM233831 AM233832 AM233833 AM233836 AM233838 AY640515 AB066833 AY941987 DQ168569 HM996472 HQ378399 AF021959 AJ239373 AJ272398 AJ555263 AY685303 DQ100803 DQ490742 DQ523920 DQ523934 DQ523971 DQ524022 DQ524049 DQ524147 DQ524150 DQ524160 DQ926054 GU570396 GU570398 HM995095 HM995420 HM995456 HM995460 HM995529 HM995571 HM995573 HM995577 HM995607 HM995969 HM996171 HM996234 HM996245 HM996273 HM996421 HM996528 HM996547 HQ378338 U77555 X94019 X94043 Z46759 HM995213 AB063835 AB063897 AB063925 AB066826 AB066832 AB066935 AB067154 AB067157 AB067159 AB067175 AB067326 AB067330 AB067334 AB067392 AB245095 AF174110 AF394197 AM279622 AY640502 AY640546 AY941916 AY941923 AY941958 AY971039 AY971068 AY971072 AY971073 AY971085 AY971113 AY971118 AY971121 AY971122 DQ100861 DQ100955 DQ100988 DQ490743 DQ926034 DQ926082 DQ926086 DQ926177 DQ926233 DQ926269 DQ926292 DQ926295 DQ926339 DQ926351 DQ926360 DQ926597 DQ926609 DQ926637 DQ926643 DQ926654 EU794427 EU794430 EU794443 FJ385310 FJ385369 GU570400 GU570406 HQ378329 HQ378361 HQ378384 X61649 AB063926 AB066971 AB066985 AB067015 AB067070 AB067074 AB067100 AB067116 AB067125 AB067129 AB067241 AF062125 AF062157 AF078940 AF078941 AF099197 AF110480 AF110484 AF110486 AF110487 AF174068 AF442760 AJ002767 AJ002771 AJ002772 AJ002773 AJ002774 AJ002775 AJ006165 AJ249378 AJ249636 AJ276099 AJ399826 AJ414007 AJ491906 AJ491907 AJ491913 AJ491914 AJ555254 AY033242 AY033243 AY033250 AY033274 AY033275 AY033276 AY033281 AY033282 AY033286 AY033288 AY640520 AY781870 AY941877 AY941878 AY941879 AY941919 AY941920 AY941921 AY971098 DQ065619 DQ065621 DQ065625 DQ065655 DQ065657 DQ065658 DQ205181 DQ379476 DQ490737 DQ490744 DQ926149 DQ926201 DQ926390 DQ926391 DQ926462 DQ926465 DQ926503 DQ926525 DQ926533 DQ926560 HM152490 HQ378409 L12198 L26537 U22381 U44493 U77538 U77539 U77541 U77544 U77547 U77548 U77549 U77550 U77551 U77552 U77553 U77557 U77558 U77559 U77560 U77561 U77562 U77563 U77564 U77565 U77566 U77567 X87447 X94002 X94004 X94005 X94006 X94028 X94029 X94030 X94031 X94032 X94038 X94039 X94041 X94044 X94045 X94046 X94048 X94050 X94051 X94052 X94053 X94055 X94058 X94059 X94061 X94062 X94063 X94066 X94071 X94072 X94073 X94077 Z46760 Z97037 DQ535275 DQ535319 DQ535340 DQ535347 DQ535361 DQ535401 DQ535430 DQ535447 DQ535450 DQ535454 DQ535458 DQ926623 EF177983 EF177986 EF178042 EF178049 EF178067 EF178105 FJ195497 FJ195499 FJ195517 FJ195521 FJ195527 FJ195537 JN252502 Z26829 Z26830 Z26832 Z26833 Z26839 Z26842 Z26843 Z26844 HM995790 HM995656 HM995886 M27125 U77535 U77543 U77554 U77556 AY393198 AY393202 HM995637 HM995880 AY392957 AY392958 AY392962 AY392964 AY392965 AY392966 AY392968 AY392969 AY392970 AY392976 AY392978 AY392980 AY392984 AY393084 AY393086 AY393087 AY393088 AY393090 AY393092 AY393094 AY393096 AY393097 AY393185 AY393186 AY393187 AY393188 AY393189 AY393191 AY393192 AY393193 AY393194 AY393195 AY393196 AY393197 AY393199 AY393200 AY393201 AY393203 AY393204 AF085657 AF085658 AF085659 AM233808 AF052379 AF062154 AF062214 AF348829 AF348830 AF348831 AF348832 AF348833 AF348834 AJ131060 AM233779 AM233780 AM233803 AM233834 AM233839 AY190828 L03679 X65912 X65913 X65914 X65915 Z47219 Z47225 X58402 BC014258 X58401 X58400 X58397 BC089417 BC078670 TSC_hg19_v1_chr14_-_107035221	-12931	-	TSC_hg19_v1_chr14_-_107013478 AK093806 AK097303 AK125632 AK126320 AK129510 AX748317	-34446	-	DQ187707 GU552700 GU552764 AY003783 EF175429 FJ694883 EU099078 EU099213 AM183990 EU099124 HM774924 HM774242 JN110729 JN110849 AF103239 FJ385422 FJ385433 HM773968 HM773995 HM774338 HM774389 HM774601 HM774867 HM996424 HQ704020 FJ385411 EU146318 JN110975 AF062300 AF062305 DQ524053 HM994912 HM994914 HM994916 HM994920 HM995673 HM995674 HM995675 HM995676 HM995783 HM995910 HM995945 HM996441 HM996522 AF062299 AF471505 DQ187607 DQ322806 DQ840692 DQ840693 DQ840702 DQ840814 AM279609 DQ926615 EF178081 X99992 AB063924 AB066892 AB066969 AB067011 AB067080 AB067263 AF394199 AF455925 AF459632 AF471500 AF471503 AF471504 AJ300805 AJ579185 AY055477 AY055483 AY640482 AY941852 D83692 DQ005278 DQ005282 DQ100801 DQ926649 GU570351 GU570352 GU570354 L12185 L12186 X64240 Y11898 Z96974 HM995768 AJ519245 AJ519224 AJ519230 AJ519233 AJ519246 AJ519249 AJ519251 AJ519253 AJ519255 HM995877 AJ519222 AJ519299 AY393054 AY393058 AY393158 AY393161 AY190818 Z36887 AY623427 X52894 BC090938 TSC_hg19_v1_chr14_-_107013458	-34632	-	AF028099 AF460754 DQ454615 DQ523869 GQ232779 GQ232881 GU552765 FJ873979 FJ873984 FJ874049 FJ874062 FJ874084 DQ454628 AY003743 AY003830 DQ523889 DQ523867 DQ454655 DQ523892 DQ523925 FJ840112 FJ840322 FJ873963 DQ454805 DQ523873 FJ840063 FJ840064 FJ840091 FJ840093 FJ840096 FJ840098 FJ840147 FJ840240 FJ840275 FJ840277 FJ840278 FJ840279 FJ840280 FJ840281 FJ840282 FJ840283 FJ840285 FJ840286 FJ840288 FJ840289 FJ840290 FJ840291 FJ840294 FJ840296 FJ840298 FJ840299 FJ840300 FJ840301 FJ840303 FJ873817 FJ873838 FJ873840 FJ873886 FJ873926 FJ873934 FJ874029 FJ874031 FJ874050 FJ874058 AJ008233 DQ523926 AY003838 AY003851 EF175410 EF091918 EU667609 JF810270 EU099077 EU099148 AF103213 AJ010335 AM183984 DQ097899 HM774214 EF555586 AF062229 FJ385338 FJ385339 FJ385347 GQ504915 GQ504957 HM774086 HM774115 HM774155 HM774774 EU146321 S73143 U85229 AY062306 AF035787 AF035788 DQ100793 DQ100813 AY941912 DQ187711 DQ524134 DQ926275 HM995353 HM995355 HM995441 HM995442 HM995443 HM995444 HM995445 HM995446 HM995470 HM995471 HM995475 HM995476 HM996019 HM996347 DQ187673 DQ322745 DQ322877 DQ322968 DQ322969 DQ322970 DQ322971 DQ322972 U00540 AB373623 AY530312 AY530316 AY686913 AY941884 AY986398 DQ100978 DQ926080 DQ926111 DQ926299 DQ926303 DQ926575 DQ926577 DQ926583 DQ926598 AB066888 AB067000 AB363089 AB363160 AB373617 AB373626 AF006517 AF006525 AF035042 AF174059 AF471510 AF471512 AF471528 AF471529 AF471530 AJ389169 AJ488540 AJ556641 AJ579109 AJ579266 AY640512 AY686909 AY941887 AY941891 AY941915 DQ535286 DQ535377 DQ535410 DQ926146 DQ926152 DQ926467 EF177944 EF177957 EF178005 EF178011 EF178016 EF178078 EF178107 FJ195522 FJ773245 FJ773246 GU570355 HM152495 HM152503 HM152507 HM451460 S76131 U00490 U00498 U00567 X62958 X64243 X77472 X99353 Z33902 Z33904 Z96964 M18520 M18521 HM995907 AY393055 AF062122 AJ548507 AY190822 X81724 X81730 X81735 L08085 BC072419 X61011 AK092785 AX747729 TSC_hg19_v1_chr14_-_107049194	1023	-	AB063741 AY393018 AF062170 AY393124 Z47215 AK126281 TSC_hg19_v1_chr14_-_107066261	18242	-	DQ454429 DQ454922 HM116180 EF091913 EF175413 GQ232868 GQ232976 EF583666 EF407827 EF407822 AJ007320 AF308556 AF103132 HM774392 HQ703981 JN110710 JN111102 HM774550 AY393601 AY393649 AY393679 EU099114 EU099216 DQ100711 AB066834 AF174037 AY050706 DQ005304 FJ492918 HM994925 HQ689790 Z80842 DQ524125 DQ535395 HQ378413 DQ100675 HM996225 AB067078 AY866569 AY971062 DQ065681 DQ926239 EF028212 HM994895 HM994932 HM994933 HM994938 HM994946 HM994963 HM994965 HM995218 HM995258 HM995267 HM995314 HM996512 HM996546 AF021955 GU570262 AF062174 AF062225 AF062279 TSC_hg19_v1_chr14_-_107078867	30803	-	BC014258|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089417|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC078670|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC072419|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126281|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.0	
chr16	302784	302965	reg1027158.p1	4.572	+	AK294581 AL136542 TSC_hg19_v1_chr16_+_284834	-18038	+	TSC_hg19_v1_chr16_+_284828 AK310766 AK057165 NM_032039	-18061	+	CU678436 AB528653 TSC_hg19_v1_chr16_-_279416 BC065198 AJ404326 AK001093 BX647161 AK223084 BC003194 AY005111 NM_018032 NM_201412	-23464	-	AK308972 AB016929 AB464135 AF035153 AF035154 NM_003834 NM_183337 AK294033 BC141803 AK293564 AK294448 AK091701 AX747138 BC040504	23049	-	BC047699 NM_001176 U82532 AB590832 CU690464 AB127078 AF498928	27768	+	NM_006849 TSC_hg19_v1_chr16_+_333160 AK075485 AK124931 BC027964 BC000537 AK308516 BC075029 U19948 AK295383	30297	+	AK294581|ITFG3|83986|integrin alpha FG-GAP repeat containing 3##AL136542|ITFG3|83986|integrin alpha FG-GAP repeat containing 3##AK310766|ITFG3|83986|integrin alpha FG-GAP repeat containing 3##AK057165|ITFG3|83986|integrin alpha FG-GAP repeat containing 3##NM_032039|ITFG3|83986|integrin alpha FG-GAP repeat containing 3##BC065198|LUC7L|55692|LUC7-like (S. cerevisiae)##AJ404326|LUC7L|55692|LUC7-like (S. cerevisiae)##AK001093|LUC7L|55692|LUC7-like (S. cerevisiae)##BX647161|LUC7L|55692|LUC7-like (S. cerevisiae)##AK223084|LUC7L|55692|LUC7-like (S. cerevisiae)##BC003194|LUC7L|55692|LUC7-like (S. cerevisiae)##AY005111|LUC7L|55692|LUC7-like (S. cerevisiae)##NM_018032|LUC7L|55692|LUC7-like (S. cerevisiae)##NM_201412|LUC7L|55692|LUC7-like (S. cerevisiae)##AK308972|RGS11|8786|regulator of G-protein signaling 11##AB016929|RGS11|8786|regulator of G-protein signaling 11##AF035153|RGS11|8786|regulator of G-protein signaling 11##AF035154|RGS11|8786|regulator of G-protein signaling 11##NM_003834|RGS11|8786|regulator of G-protein signaling 11##NM_183337|RGS11|8786|regulator of G-protein signaling 11##BC141803|RGS11|8786|regulator of G-protein signaling 11##AK293564|RGS11|8786|regulator of G-protein signaling 11##AK294448|RGS11|8786|regulator of G-protein signaling 11##AK091701|RGS11|8786|regulator of G-protein signaling 11##BC040504|RGS11|8786|regulator of G-protein signaling 11##BC047699|ARHGDIG|398|Rho GDP dissociation inhibitor (GDI) gamma##NM_001176|ARHGDIG|398|Rho GDP dissociation inhibitor (GDI) gamma##U82532|ARHGDIG|398|Rho GDP dissociation inhibitor (GDI) gamma##AF498928|ARHGDIG|398|Rho GDP dissociation inhibitor (GDI) gamma##NM_006849|PDIA2|64714|protein disulfide isomerase family A, member 2##AK075485|PDIA2|64714|protein disulfide isomerase family A, member 2##AK124931|PDIA2|64714|protein disulfide isomerase family A, member 2##BC027964|PDIA2|64714|protein disulfide isomerase family A, member 2##BC000537|PDIA2|64714|protein disulfide isomerase family A, member 2##AK308516|PDIA2|64714|protein disulfide isomerase family A, member 2##BC075029|PDIA2|64714|protein disulfide isomerase family A, member 2##U19948|PDIA2|64714|protein disulfide isomerase family A, member 2##AK295383|PDIA2|64714|protein disulfide isomerase family A, member 2	0.0	
chr19	28293392	28293495	reg1033177.p2	4.572	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-8515	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-8610	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-9055	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	1410617	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	1410678	-	NM_001146339	1724047	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.830068	CTCF.p2:2:0.830
chr5	87898623	87898720	reg1020763.p1	4.572	+	BC047059 TSC_hg19_v1_chr5_+_87564842	-333822	+	TSC_hg19_v1_chr5_+_87564773 BC030122	-333915	+	BX647345 AK299896 AK300893 AK301091 AY358693 BC037287 NM_153354 AK294520	-334027	-	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	70474	-	TSC_hg19_v1_chr5_-_87980643 AK125167	82036	-	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	221002	-	BC047059|LOC100505894|100505894|uncharacterized LOC100505894##BC030122|LOC100505894|100505894|uncharacterized LOC100505894##BX647345|TMEM161B|153396|transmembrane protein 161B##AK299896|TMEM161B|153396|transmembrane protein 161B##AK300893|TMEM161B|153396|transmembrane protein 161B##AK301091|TMEM161B|153396|transmembrane protein 161B##AY358693|TMEM161B|153396|transmembrane protein 161B##BC037287|TMEM161B|153396|transmembrane protein 161B##NM_153354|TMEM161B|153396|transmembrane protein 161B##AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C	0.991795	CTCF.p2:9:0.992
chr7	112120552	112120713	reg1031172.p1	4.572	+	NM_001197079	-28520	+	TSC_hg19_v1_chr7_+_112090514 NM_001550 AK225222 BC001272 Y10313 AK297509 AB527574 BT019889 BT019890 CU674634	-30029	+	TSC_hg19_v1_chr7_+_112063228 AK313211 NM_001007245 NM_001197080 AK315967 AK308066	-57440	+	NM_001134468 BC031976 AK096894 NM_182597	354	+	AK293311 TSC_hg19_v1_chr7_-_112430447 AK314460 AL136626 AK025482 NM_022484	309811	-	AL834437 AK299901 TSC_hg19_v1_chr7_-_112579931 BC114615 AK056380 NM_152556	459198	-	NM_001197079|IFRD1|3475|interferon-related developmental regulator 1##NM_001550|IFRD1|3475|interferon-related developmental regulator 1##AK225222|IFRD1|3475|interferon-related developmental regulator 1##BC001272|IFRD1|3475|interferon-related developmental regulator 1##AK297509|IFRD1|3475|interferon-related developmental regulator 1##BT019889|IFRD1|3475|interferon-related developmental regulator 1##BT019890|IFRD1|3475|interferon-related developmental regulator 1##AK313211|IFRD1|3475|interferon-related developmental regulator 1##NM_001007245|IFRD1|3475|interferon-related developmental regulator 1##NM_001197080|IFRD1|3475|interferon-related developmental regulator 1##AK315967|IFRD1|3475|interferon-related developmental regulator 1##AK308066|IFRD1|3475|interferon-related developmental regulator 1##NM_001134468|C7orf53|286006|chromosome 7 open reading frame 53##BC031976|C7orf53|286006|chromosome 7 open reading frame 53##AK096894|C7orf53|286006|chromosome 7 open reading frame 53##NM_182597|C7orf53|286006|chromosome 7 open reading frame 53##AK293311|TMEM168|64418|transmembrane protein 168##AK314460|TMEM168|64418|transmembrane protein 168##AL136626|TMEM168|64418|transmembrane protein 168##AK025482|TMEM168|64418|transmembrane protein 168##NM_022484|TMEM168|64418|transmembrane protein 168##AL834437|C7orf60|154743|chromosome 7 open reading frame 60##AK299901|C7orf60|154743|chromosome 7 open reading frame 60##BC114615|C7orf60|154743|chromosome 7 open reading frame 60##AK056380|C7orf60|154743|chromosome 7 open reading frame 60##NM_152556|C7orf60|154743|chromosome 7 open reading frame 60	0.988205	CTCF.p2:-17:0.988
chr14	55600341	55600466	reg1029114.p1	4.571	+	TSC_hg19_v1_chr14_+_55595969 AB006780 BC053667 BC068068 M36682 BC001120 M35368 M57710	-4418	+	TSC_hg19_v1_chr14_+_55595963 NM_001177388 NM_002306 AK314929	-4455	+	AK025580 TSC_hg19_v1_chr14_+_55518408 BC015621	-81972	+	TSC_hg19_v1_chr14_-_55650349 BT007344	50003	-	TSC_hg19_v1_chr14_-_55658298 BX248255 D13633 AK291847 AK299338 BC010658 AK297480 AB076695 NM_001146015 NM_014750	57897	-	NM_017943 AK092879 AX747787 TSC_hg19_v1_chr14_+_55738097 BC109120 BC109121	137656	+	AB006780|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC053667|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC068068|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M36682|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC001120|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M35368|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M57710|LGALS3|3958|lectin, galactoside-binding, soluble, 3##NM_001177388|LGALS3|3958|lectin, galactoside-binding, soluble, 3##NM_002306|LGALS3|3958|lectin, galactoside-binding, soluble, 3##AK314929|LGALS3|3958|lectin, galactoside-binding, soluble, 3##AK025580|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##BC015621|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##BX248255|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##D13633|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK291847|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK299338|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##BC010658|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK297480|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AB076695|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_001146015|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_014750|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_017943|FBXO34|55030|F-box protein 34##AK092879|FBXO34|55030|F-box protein 34##BC109120|FBXO34|55030|F-box protein 34##BC109121|FBXO34|55030|F-box protein 34	0.0	
chr22	37596787	37596891	reg1026444.p2	4.571	+	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	-12548	-	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	-50887	-	CR456446 TSC_hg19_v1_chr22_-_37505748	-91161	-	BC042068 NM_001051 AK291165	11544	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	43382	-	TSC_hg19_v1_chr22_-_37640315 AK096924 BC001485 NM_002872	43462	-	CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##CR456446|TMPRSS6|164656|transmembrane protease, serine 6##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##AK096924|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BC001485|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##NM_002872|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)	0.055473	
chr5	89225121	89225246	reg1028278.p1	4.571	+	AL833268 AL833274 NM_001131005 NM_001193347	-1025289	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1039919	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-1040063	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	480356	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	544999	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	545395	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr7	69142158	69142280	reg1027751.p1	4.571	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-77631	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-77890	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-78383	+	TSC_hg19_v1_chr7_+_70231164 AK296981	1088986	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1455569	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2659559	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.031594	
chr11	64111399	64111490	reg1026825.p1	4.570	+	TSC_hg19_v1_chr11_+_64107692 BC151218 BC151222 NM_032251 AK090436 BC140822 BC140824 BC141866	-3742	+	TSC_hg19_v1_chr11_+_64085676 AF124993 AF110731 BC113723 BC113725 BC143849 BC171733 AF112212 AF242525 AF231705 CR457203 HQ258129 AJ249483	-25722	+	BC110983 NM_012094 NM_181651 NM_181652 TSC_hg19_v1_chr11_+_64085600 AF197952	-25865	+	TSC_hg19_v1_chr11_+_64120348 AK126728	8915	+	TSC_hg19_v1_chr11_+_64126642 AK223561 NM_001006944 NM_003942 AJ010119 AK292163 AK313567 BC047896 AK298507 BC028079 CU690526 AF074715	15287	+	AK290791 BC034384 NM_018484 AK129930	211681	+	BC151218|CCDC88B|283234|coiled-coil domain containing 88B##BC151222|CCDC88B|283234|coiled-coil domain containing 88B##NM_032251|CCDC88B|283234|coiled-coil domain containing 88B##AK090436|CCDC88B|283234|coiled-coil domain containing 88B##BC140822|CCDC88B|283234|coiled-coil domain containing 88B##BC140824|CCDC88B|283234|coiled-coil domain containing 88B##BC141866|CCDC88B|283234|coiled-coil domain containing 88B##AF124993|PRDX5|25824|peroxiredoxin 5##AF110731|PRDX5|25824|peroxiredoxin 5##BC113723|PRDX5|25824|peroxiredoxin 5##BC113725|PRDX5|25824|peroxiredoxin 5##BC143849|PRDX5|25824|peroxiredoxin 5##BC171733|PRDX5|25824|peroxiredoxin 5##AF112212|PRDX5|25824|peroxiredoxin 5##AF242525|PRDX5|25824|peroxiredoxin 5##AF231705|PRDX5|25824|peroxiredoxin 5##CR457203|PRDX5|25824|peroxiredoxin 5##HQ258129|PRDX5|25824|peroxiredoxin 5##AJ249483|PRDX5|25824|peroxiredoxin 5##BC110983|PRDX5|25824|peroxiredoxin 5##NM_012094|PRDX5|25824|peroxiredoxin 5##NM_181651|PRDX5|25824|peroxiredoxin 5##NM_181652|PRDX5|25824|peroxiredoxin 5##AF197952|PRDX5|25824|peroxiredoxin 5##AK126728|CCDC88B|283234|coiled-coil domain containing 88B##AK223561|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_001006944|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_003942|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AJ010119|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK292163|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK313567|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC047896|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK298507|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC028079|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AF074715|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK290791|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##BC034384|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##NM_018484|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AK129930|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11	0.982641	CTCF.p2:31:0.983
chr12	113518357	113518454	reg1029041.p1	4.570	+	NM_004416 BC048216	-22715	+	TSC_hg19_v1_chr12_+_113416323 NM_001032731 NM_002535 NM_016817 BC010625 BC053870 BC023637 AK292906 BC069052 BC049215 AK292796 M87284 M87434 AB590925 CU690608	-102065	+	AF063613 TSC_hg19_v1_chr12_+_113376306	-142065	+	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	55007	-	AF086713 AB208935 AK294350 NM_001193520 NM_004658	55626	-	AK308987 NM_001144872	69199	+	NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)##BC048216|DTX1|1840|deltex homolog 1 (Drosophila)##NM_001032731|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_002535|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_016817|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC010625|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC053870|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC023637|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292906|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC069052|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC049215|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292796|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87284|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87434|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AF063613|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001144872|CCDC42B|387885|coiled-coil domain containing 42B	0.0	
chr12	82777823	82777959	reg1030797.p1	4.570	+	NM_032230 TSC_hg19_v1_chr12_+_82752307 AK310231 AK026442 BC029120 CU688600	-25582	+	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	-25715	-	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	-624782	-	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	302809	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	303026	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	303370	+	NM_032230|C12orf26|84190|chromosome 12 open reading frame 26##AK310231|C12orf26|84190|chromosome 12 open reading frame 26##AK026442|C12orf26|84190|chromosome 12 open reading frame 26##BC029120|C12orf26|84190|chromosome 12 open reading frame 26##BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59##AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2	0.793146	CTCF.p2:-13:0.793
chr14	69282649	69282829	reg1002560.p1	4.570	+	NM_001244701 AB528867	-19755	-	NM_001244698 NM_004926	-22109	-	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	-23019	-	TSC_hg19_v1_chr14_-_69354901 BX641076	72200	-	BX248020 AK299362 TSC_hg19_v1_chr14_-_69444987	162247	-	BT007207 AB590251 DQ890778 DQ895768 EU716325 FJ410030 TSC_hg19_v1_chr14_-_69445830 M95178 BC015766	163091	-	NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BX641076|ACTN1|87|actinin, alpha 1##BX248020|ACTN1|87|actinin, alpha 1##AK299362|ACTN1|87|actinin, alpha 1##BT007207|ACTN1|87|actinin, alpha 1##DQ890778|ACTN1|87|actinin, alpha 1##DQ895768|ACTN1|87|actinin, alpha 1##EU716325|ACTN1|87|actinin, alpha 1##FJ410030|ACTN1|87|actinin, alpha 1##M95178|ACTN1|87|actinin, alpha 1##BC015766|ACTN1|87|actinin, alpha 1	0.0	
chr16	4666550	4666651	reg1031325.p2	4.570	+	BC040160 TSC_hg19_v1_chr16_-_4665044	-1572	-	TSC_hg19_v1_chr16_-_4664901 BC062534 NM_145253	-1667	-	TSC_hg19_v1_chr16_-_4664870 CU687554 AF370434 BC012018 AK055785 BC025327 BC008681	-1766	-	TSC_hg19_v1_chr16_+_4674826 NM_001142289 NM_001142290 NM_001142291 NM_015246	8223	+	TSC_hg19_v1_chr16_+_4674861 AK299052 BC050389 AB011116	8262	+	AB383902 CU690664 EF471397 EF471398 TSC_hg19_v1_chr16_+_4675003	8388	+	BC040160|FAM100A|124402|family with sequence similarity 100, member A##BC062534|FAM100A|124402|family with sequence similarity 100, member A##NM_145253|FAM100A|124402|family with sequence similarity 100, member A##AF370434|FAM100A|124402|family with sequence similarity 100, member A##BC012018|FAM100A|124402|family with sequence similarity 100, member A##AK055785|FAM100A|124402|family with sequence similarity 100, member A##BC025327|FAM100A|124402|family with sequence similarity 100, member A##BC008681|FAM100A|124402|family with sequence similarity 100, member A##NM_001142289|MGRN1|23295|mahogunin, ring finger 1##NM_001142290|MGRN1|23295|mahogunin, ring finger 1##NM_001142291|MGRN1|23295|mahogunin, ring finger 1##NM_015246|MGRN1|23295|mahogunin, ring finger 1##AK299052|MGRN1|23295|mahogunin, ring finger 1##BC050389|MGRN1|23295|mahogunin, ring finger 1##AB011116|MGRN1|23295|mahogunin, ring finger 1##EF471397|MGRN1|23295|mahogunin, ring finger 1##EF471398|MGRN1|23295|mahogunin, ring finger 1	0.0	
chr3	119115005	119115185	reg1028721.p2	4.570	+	TSC_hg19_v1_chr3_+_119013513 AK293726 BC112163 BC112165 AB384581 HQ258543	-101475	+	TSC_hg19_v1_chr3_+_119013229 AB033030 NM_020754	-101864	+	TSC_hg19_v1_chr3_-_118959726 AK001006 AK301688 AK314425 BX647468 CR749555 NM_003778 NM_212543	-155358	-	TSC_hg19_v1_chr3_-_119182462 BC003192 BC010070 BC021277 AK222950 AK223248 AK001764 NM_018266	67374	-	TSC_hg19_v1_chr3_+_119187809 NM_152305 AY298903 BC030614 AK295984 AK301002 AK315367 AK222937 AF168711 BC048810 AY358581 AK075444 BC011871 CU688946 CU690580	72730	+	NM_016589 TSC_hg19_v1_chr3_+_119217393 AF139077 AL136622 AK026250 AK225954 AF210057 AL390077 AY358633 AL390090 BC012341 AB528090 AM393632 CU680290 CR457158 CR533524	102378	+	AK293726|ARHGAP31|57514|Rho GTPase activating protein 31##BC112163|ARHGAP31|57514|Rho GTPase activating protein 31##BC112165|ARHGAP31|57514|Rho GTPase activating protein 31##HQ258543|ARHGAP31|57514|Rho GTPase activating protein 31##AB033030|ARHGAP31|57514|Rho GTPase activating protein 31##NM_020754|ARHGAP31|57514|Rho GTPase activating protein 31##AK001006|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK301688|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK314425|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BX647468|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##CR749555|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_003778|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_212543|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BC003192|TMEM39A|55254|transmembrane protein 39A##BC010070|TMEM39A|55254|transmembrane protein 39A##BC021277|TMEM39A|55254|transmembrane protein 39A##AK222950|TMEM39A|55254|transmembrane protein 39A##AK223248|TMEM39A|55254|transmembrane protein 39A##AK001764|TMEM39A|55254|transmembrane protein 39A##NM_018266|TMEM39A|55254|transmembrane protein 39A##NM_152305|POGLUT1|56983|protein O-glucosyltransferase 1##AY298903|POGLUT1|56983|protein O-glucosyltransferase 1##BC030614|POGLUT1|56983|protein O-glucosyltransferase 1##AK295984|POGLUT1|56983|protein O-glucosyltransferase 1##AK301002|POGLUT1|56983|protein O-glucosyltransferase 1##AK315367|POGLUT1|56983|protein O-glucosyltransferase 1##AK222937|POGLUT1|56983|protein O-glucosyltransferase 1##AF168711|POGLUT1|56983|protein O-glucosyltransferase 1##BC048810|POGLUT1|56983|protein O-glucosyltransferase 1##AY358581|POGLUT1|56983|protein O-glucosyltransferase 1##AK075444|POGLUT1|56983|protein O-glucosyltransferase 1##NM_016589|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF139077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL136622|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK026250|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK225954|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF210057|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AY358633|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390090|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##BC012341|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AM393632|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR457158|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR533524|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1	0.063601	
chr6_dbb_hap3	2083896	2084032	reg1030880.p1	4.570	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.997496	CTCF.p2:12:0.997
chrX	106106389	106106570	reg1032263.p2	4.570	+	TSC_hg19_v1_chrX_+_106045925 AK123957 NM_017752 NM_198881 BC122564 BX648230 AB449890 AB449891	-60498	+	TSC_hg19_v1_chrX_+_105969932 AK074264 NM_194463 BC063404 AF394689 CU687692	-136471	+	BC036901 NM_024539 AK126553	-169404	+	AF177340 NM_001171092	36914	+	BC007652 BC101998 BC105691 BC105692 BC110436 BC127250 NM_001171706 NM_138382	40074	-	AK312515 NM_001171095	55110	+	AK123957|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_017752|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_198881|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BC122564|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BX648230|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449890|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449891|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AK074264|RNF128|79589|ring finger protein 128##NM_194463|RNF128|79589|ring finger protein 128##BC063404|RNF128|79589|ring finger protein 128##AF394689|RNF128|79589|ring finger protein 128##BC036901|RNF128|79589|ring finger protein 128##NM_024539|RNF128|79589|ring finger protein 128##AK126553|RNF128|79589|ring finger protein 128##AF177340|CLDN2|9075|claudin 2##NM_001171092|CLDN2|9075|claudin 2##BC007652|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC101998|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC105691|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC105692|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC110436|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC127250|RIPPLY1|92129|ripply1 homolog (zebrafish)##NM_001171706|RIPPLY1|92129|ripply1 homolog (zebrafish)##NM_138382|RIPPLY1|92129|ripply1 homolog (zebrafish)##AK312515|CLDN2|9075|claudin 2##NM_001171095|CLDN2|9075|claudin 2	0.85024	CTCF.p2:-12:0.850
chr10	101619524	101619620	reg1028417.p1	4.569	+	TSC_hg19_v1_chr10_+_101542570 X96395 BC136419 U63970	-77009	+	TSC_hg19_v1_chr10_+_101542477 NM_000392 U49248 U66683	-77077	+	BX537557 NM_004376 NM_078470	-127150	-	BC020878 TSC_hg19_v1_chr10_-_101690657 AK128576	71131	-	TSC_hg19_v1_chr10_-_101769671 AL833283 NM_015221	150089	-	X14329 BC027897 NM_001308 AK313972	222053	-	X96395|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##BC136419|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U63970|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##NM_000392|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U49248|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U66683|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##BX537557|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##NM_004376|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##NM_078470|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AK128576|DNMBP|23268|dynamin binding protein##AL833283|DNMBP|23268|dynamin binding protein##NM_015221|DNMBP|23268|dynamin binding protein##X14329|CPN1|1369|carboxypeptidase N, polypeptide 1##BC027897|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_001308|CPN1|1369|carboxypeptidase N, polypeptide 1##AK313972|CPN1|1369|carboxypeptidase N, polypeptide 1	0.0	
chr1	154816459	154816610	reg1031911.p2	4.569	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-216069	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-216120	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-235834	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	15728	-	BX649146 TSC_hg19_v1_chr1_-_154840541	23967	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	26212	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.128501	
chr13	71815204	71815312	reg1029804.p1	4.569	+	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	-1132717	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-4010754	-	AK289924 NM_022843	-9825604	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	625001	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	625505	-	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	626176	-	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)	0.173431	
chr18	5425005	5425127	reg1026218.p1	4.569	+	NM_001243704	-128015	-	TSC_hg19_v1_chr18_-_5296038 AK313236 BC057282 NM_001143823 NM_003409	-128963	-	TSC_hg19_v1_chr18_-_5295610 NM_001243702	-129413	-	AF069072 AB023204 NM_012307 TSC_hg19_v1_chr18_-_5543997 AK128531	118922	-	TSC_hg19_v1_chr18_-_5630663 BC008377	205581	-	NM_001080209	467036	-	NM_001243704|ZFP161|7541|zinc finger protein 161 homolog (mouse)##AK313236|ZFP161|7541|zinc finger protein 161 homolog (mouse)##BC057282|ZFP161|7541|zinc finger protein 161 homolog (mouse)##NM_001143823|ZFP161|7541|zinc finger protein 161 homolog (mouse)##NM_003409|ZFP161|7541|zinc finger protein 161 homolog (mouse)##NM_001243702|ZFP161|7541|zinc finger protein 161 homolog (mouse)##AF069072|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AB023204|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_012307|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AK128531|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_001080209|TMEM200C|645369|transmembrane protein 200C	0.994296	CTCF.p2:45:0.994
chr19	7213525	7213706	reg1034669.p1	4.569	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-114064	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-143900	+	AK315405 NM_001044387 NM_001044388 NM_024341	-144153	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	80345	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	246392	+	TSC_hg19_v1_chr19_+_7460061 AB011093	246462	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr20	56268522	56268646	reg1032921.p1	4.569	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	-73046	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	-132427	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	-168383	-	TSC_hg19_v1_chr20_-_56285017 AF305616 AX775889 NM_020182	16405	-	TSC_hg19_v1_chr20_+_56285236 AK056098	16641	+	TSC_hg19_v1_chr20_-_56285634 BC080635 AF224278 AY128643 NM_199169 NM_199170 AX775887 AK296199	17038	-	BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##BC080635|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AF224278|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AY128643|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199169|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199170|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK296199|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	0.979592	CTCF.p2:-3:0.980
chr21	35882716	35882896	reg1000251.p1	4.569	+	AK311384 AY789479 EU008568 EU008569 AK313543 BC036452 NM_001127668 NM_001127669	-50928	-	AY789480 NM_001127670 EU008570	-54734	-	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	-134981	+	AK304336 NM_000219 BC069055	846	-	TSC_hg19_v1_chr21_-_35884509 AK095442 BC046224	1731	-	CR542065 AK299444 TSC_hg19_v1_chr21_-_35899121 AK293293 U85267 NM_203418	16347	-	AK311384|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AY789479|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008568|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008569|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK313543|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC036452|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127668|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127669|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AK304336|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_000219|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC069055|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##AK095442|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##BC046224|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##CR542065|RCAN1|1827|regulator of calcineurin 1##AK299444|RCAN1|1827|regulator of calcineurin 1##AK293293|RCAN1|1827|regulator of calcineurin 1##U85267|RCAN1|1827|regulator of calcineurin 1##NM_203418|RCAN1|1827|regulator of calcineurin 1	0.0	
chr22	29598951	29599093	reg1021275.p2	4.569	+	TSC_hg19_v1_chr22_+_29469035 BC063787 NM_001039570 NM_032045 AK056425 AB059618	-130000	+	CR456405 BC074758 BC126262 BC126264 AL035364 NM_015370	-141173	-	TSC_hg19_v1_chr22_+_29449893 BC042614	-149097	+	TSC_hg19_v1_chr22_+_29601914 BC046358 NM_133455 CR456407 CU012965 CU013253 AB463024 AJ416090	2870	+	TSC_hg19_v1_chr22_-_29663824 AL050346 NM_012265	64846	-	NM_001163285 NM_001163286 NM_001163287 NM_005243 NM_013986 TSC_hg19_v1_chr22_+_29664088	65025	+	BC063787|KREMEN1|83999|kringle containing transmembrane protein 1##NM_001039570|KREMEN1|83999|kringle containing transmembrane protein 1##NM_032045|KREMEN1|83999|kringle containing transmembrane protein 1##AK056425|KREMEN1|83999|kringle containing transmembrane protein 1##AB059618|KREMEN1|83999|kringle containing transmembrane protein 1##CR456405|C22orf31|25770|chromosome 22 open reading frame 31##BC074758|C22orf31|25770|chromosome 22 open reading frame 31##BC126262|C22orf31|25770|chromosome 22 open reading frame 31##BC126264|C22orf31|25770|chromosome 22 open reading frame 31##AL035364|C22orf31|25770|chromosome 22 open reading frame 31##NM_015370|C22orf31|25770|chromosome 22 open reading frame 31##BC042614|ZNRF3|84133|zinc and ring finger 3##BC046358|EMID1|129080|EMI domain containing 1##NM_133455|EMID1|129080|EMI domain containing 1##CR456407|EMID1|129080|EMI domain containing 1##CU012965|EMID1|129080|EMI domain containing 1##CU013253|EMID1|129080|EMI domain containing 1##AJ416090|EMID1|129080|EMI domain containing 1##AL050346|RHBDD3|25807|rhomboid domain containing 3##NM_012265|RHBDD3|25807|rhomboid domain containing 3##NM_001163285|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163286|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163287|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_005243|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_013986|EWSR1|2130|Ewing sarcoma breakpoint region 1	0.0	
chr6	43478093	43478274	reg1030158.p2	4.569	+	BC107130 TSC_hg19_v1_chr6_-_43478085 BC108661	-147	-	AK127338 NM_001146017	-20916	+	TSC_hg19_v1_chr6_+_43445324 BC046239	-32835	+	NM_001012974	240	-	TSC_hg19_v1_chr6_-_43484665 AL050274 AB463356 AM393648 AM393729 AK021655 AK022757 AK021433 AF162672 AK000946 AK298150 AK308961 BC019297	6414	-	TSC_hg19_v1_chr6_-_43484712 NM_015388	6532	-	BC107130|LRRC73|221424|leucine rich repeat containing 73##BC108661|LRRC73|221424|leucine rich repeat containing 73##AK127338|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_001146017|TJAP1|93643|tight junction associated protein 1 (peripheral)##BC046239|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_001012974|LRRC73|221424|leucine rich repeat containing 73##AL050274|YIPF3|25844|Yip1 domain family, member 3##AM393648|YIPF3|25844|Yip1 domain family, member 3##AM393729|YIPF3|25844|Yip1 domain family, member 3##AK021655|YIPF3|25844|Yip1 domain family, member 3##AK022757|YIPF3|25844|Yip1 domain family, member 3##AK021433|YIPF3|25844|Yip1 domain family, member 3##AF162672|YIPF3|25844|Yip1 domain family, member 3##AK000946|YIPF3|25844|Yip1 domain family, member 3##AK298150|YIPF3|25844|Yip1 domain family, member 3##AK308961|YIPF3|25844|Yip1 domain family, member 3##BC019297|YIPF3|25844|Yip1 domain family, member 3##NM_015388|YIPF3|25844|Yip1 domain family, member 3	0.0	
chr7	78927613	78927741	reg1028424.p2	4.569	+	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-1458168	+	BC067742 TSC_hg19_v1_chr7_+_77428204 AL136883	-1499467	+	TSC_hg19_v1_chr7_+_77428194 NM_001127358 NM_001127360 AK225854 AK090643 AX746556 AK308289	-1499536	+	AB014605 BC150277 AK297353 AF038563 NM_012301	155202	-	TSC_hg19_v1_chr7_+_79083303 AK311103	155480	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	836462	+	BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##BC067742|PHTF2|57157|putative homeodomain transcription factor 2##AL136883|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2##AK225854|PHTF2|57157|putative homeodomain transcription factor 2##AK090643|PHTF2|57157|putative homeodomain transcription factor 2##AK308289|PHTF2|57157|putative homeodomain transcription factor 2##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1	0.498172	CTCF.p2:-2:0.475
chr8	11446945	11447074	reg1006716.p1	4.569	+	S76617 NM_001715 BC018703 BC004473 BC038555	-95416	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-122780	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-242005	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	114711	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	180259	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	213175	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.0	
chr8	130871815	130871937	reg1032988.p2	4.569	+	AB042405 NM_031415	-72743	-	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-2065093	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-2123386	+	BC003599 TSC_hg19_v1_chr8_-_130951934	80039	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	80130	-	BC016345 TSC_hg19_v1_chr8_-_131028667	156783	-	AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B	0.02664	
chr12	49658831	49658961	reg1027484.p1	4.568	+	TSC_hg19_v1_chr12_+_49658867 BC011790 BC004949 BC033064 BC051297 BC019298 BC021088	-12	+	TSC_hg19_v1_chr12_+_49658864 D28390 AK223024 BC005946 NM_032704	-33	+	TSC_hg19_v1_chr12_-_49582864 BC006468 BC050637 AF141347 AK057842 AK297775 BC057823 NM_006009 AK298838	-76064	-	NM_006262 TSC_hg19_v1_chr12_+_49688929 BC032703 AB528454 CU689492 DQ893358 DQ896677	30049	+	NM_001100620 NM_005480 TSC_hg19_v1_chr12_+_49717037 AK315211 AK296811 AK309716 AK310709 AK299302 BC032583 BC018627 BC011597	58140	+	BC110812 AF466366 NM_001008223	72067	-	BC011790|TUBA1C|84790|tubulin, alpha 1c##BC004949|TUBA1C|84790|tubulin, alpha 1c##BC033064|TUBA1C|84790|tubulin, alpha 1c##BC051297|TUBA1C|84790|tubulin, alpha 1c##BC019298|TUBA1C|84790|tubulin, alpha 1c##BC021088|TUBA1C|84790|tubulin, alpha 1c##D28390|TUBA1C|84790|tubulin, alpha 1c##AK223024|TUBA1C|84790|tubulin, alpha 1c##BC005946|TUBA1C|84790|tubulin, alpha 1c##NM_032704|TUBA1C|84790|tubulin, alpha 1c##BC006468|TUBA1A|7846|tubulin, alpha 1a##BC050637|TUBA1A|7846|tubulin, alpha 1a##AF141347|TUBA1A|7846|tubulin, alpha 1a##AK057842|TUBA1A|7846|tubulin, alpha 1a##AK297775|TUBA1A|7846|tubulin, alpha 1a##BC057823|TUBA1A|7846|tubulin, alpha 1a##NM_006009|TUBA1A|7846|tubulin, alpha 1a##AK298838|TUBA1A|7846|tubulin, alpha 1a##NM_006262|PRPH|5630|peripherin##BC032703|PRPH|5630|peripherin##DQ893358|PRPH|5630|peripherin##DQ896677|PRPH|5630|peripherin##NM_001100620|TROAP|10024|trophinin associated protein (tastin)##NM_005480|TROAP|10024|trophinin associated protein (tastin)##AK315211|TROAP|10024|trophinin associated protein (tastin)##AK296811|TROAP|10024|trophinin associated protein (tastin)##AK309716|TROAP|10024|trophinin associated protein (tastin)##AK310709|TROAP|10024|trophinin associated protein (tastin)##AK299302|TROAP|10024|trophinin associated protein (tastin)##BC032583|TROAP|10024|trophinin associated protein (tastin)##BC018627|TROAP|10024|trophinin associated protein (tastin)##BC011597|TROAP|10024|trophinin associated protein (tastin)##BC110812|C1QL4|338761|complement component 1, q subcomponent-like 4##AF466366|C1QL4|338761|complement component 1, q subcomponent-like 4##NM_001008223|C1QL4|338761|complement component 1, q subcomponent-like 4	0.0	
chr17	9175798	9175911	reg1032096.p1	4.568	+	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	-250887	+	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	-306873	-	AY725853 AF128881 NM_014308	-360038	-	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	303277	-	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	303352	-	NM_001080556 NM_145054 AK074435 AB065281 BC025392 AK094847 AK315679 CU692990	304123	+	NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8##NM_001080556|WDR16|146845|WD repeat domain 16##NM_145054|WDR16|146845|WD repeat domain 16##AK074435|WDR16|146845|WD repeat domain 16##AB065281|WDR16|146845|WD repeat domain 16##BC025392|WDR16|146845|WD repeat domain 16##AK094847|WDR16|146845|WD repeat domain 16##AK315679|WDR16|146845|WD repeat domain 16	0.049165	
chr19	43361582	43361684	reg1032673.p1	4.568	+	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	-91809	-	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	-117032	-	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	-262603	-	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	22192	-	CU676604 DQ893114 DQ896388 M31125 M33666 NM_002782 X17098 BC020652 NM_001031850	60360	-	BC136401 U18467 BC030979 AK309898 NM_001206650 NM_002783	79656	-	BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##DQ893114|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##DQ896388|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M31125|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M33666|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_002782|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##X17098|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC020652|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_001031850|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC136401|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##U18467|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##BC030979|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_001206650|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_002783|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)	0.99887	CTCF.p2:-8:0.999
chr2	191672074	191672231	reg1028245.p1	4.568	+	TSC_hg19_v1_chr2_+_191513840 NM_005966 BC035724 AK292446	-158186	+	TSC_hg19_v1_chr2_-_191399454 NM_001142645	-272686	-	AK296987 TSC_hg19_v1_chr2_-_191399436	-272725	-	AK289747 NM_014905 TSC_hg19_v1_chr2_+_191745546	73394	+	TSC_hg19_v1_chr2_+_191745547 BC038507 AB020645 AF158555	73405	+	TSC_hg19_v1_chr2_+_191745568 AF097495 Y08264 AF327434	73432	+	NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##NM_001142645|TMEM194B|100131211|transmembrane protein 194B##AK296987|TMEM194B|100131211|transmembrane protein 194B##AK289747|GLS|2744|glutaminase##NM_014905|GLS|2744|glutaminase##BC038507|GLS|2744|glutaminase##AB020645|GLS|2744|glutaminase##AF158555|GLS|2744|glutaminase##AF097495|GLS|2744|glutaminase##Y08264|GLS|2744|glutaminase##AF327434|GLS|2744|glutaminase	0.989439	CTCF.p2:4:0.989
chr2	235217677	235217805	reg1029112.p2	4.568	+	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-258354	+	AY090109 NM_024080 BC126342 BC143819	-391696	+	TSC_hg19_v1_chr2_-_234777033 AK301707	-440704	-	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	187978	-	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	642917	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	1185062	+	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##AK301707|MSL3P1|151507|male-specific lethal 3 homolog (Drosophila) pseudogene 1##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.0	
chr2	68612711	68612892	reg1030302.p1	4.568	+	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	-20344	+	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	-20429	+	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	-65701	-	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	81609	-	TSC_hg19_v1_chr2_+_68694716 AK290841 NM_173545 AK308186 BC041144 CU691972	81963	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	260152	+	DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48##AK290841|APLF|200558|aprataxin and PNKP like factor##NM_173545|APLF|200558|aprataxin and PNKP like factor##AK308186|APLF|200558|aprataxin and PNKP like factor##BC041144|APLF|200558|aprataxin and PNKP like factor##AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1	0.0	
chr5	89902517	89902632	reg1028636.p1	4.568	+	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	-47960	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-77208	-	NM_006467 AK295434 U93868	-131872	+	AK091866 TSC_hg19_v1_chr5_-_90610220	707671	-	TSC_hg19_v1_chr5_+_90676181 BC043415	773588	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	776558	-	AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3	0.013192	
chr6	50152870	50152994	reg1031949.p2	4.568	+	DQ012016 NM_001037498	-136569	-	DQ012014 DQ012015 NM_001037497 NM_001037728	-163262	-	DQ012017 NM_001037729	-215595	-	AY028376 NM_172238	528324	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	633603	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	1799463	-	DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##DQ012014|DEFB110|245913|defensin, beta 110 locus##DQ012015|DEFB110|245913|defensin, beta 110 locus##NM_001037497|DEFB110|245913|defensin, beta 110 locus##NM_001037728|DEFB110|245913|defensin, beta 110 locus##DQ012017|DEFB113|245927|defensin, beta 113##NM_001037729|DEFB113|245927|defensin, beta 113##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	0.035045	
chr9	127073689	127073803	reg1031978.p2	4.568	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	-19114	+	TSC_hg19_v1_chr9_+_127054267 NM_001166170 NM_001166171	-19487	+	TSC_hg19_v1_chr9_+_127020588 AL832574	-53156	+	TSC_hg19_v1_chr9_+_127119114 BC042968	45423	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	103974	-	AY278562 NM_001161808	139676	+	AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166170|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166171|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144	0.144701	
chr11	65190184	65190362	reg1028899.p1	4.567	+	TSC_hg19_v1_chr11_+_65190268 EF177379 GQ859162	-4	+	TSC_hg19_v1_chr11_+_65154127 AK074850 BC033851 AK056778 BC044658 AK291678 AK304363 BC051695	-36162	+	NM_031904 TSC_hg19_v1_chr11_+_65154083 BC021094	-36209	+	TSC_hg19_v1_chr11_+_65190274 AK026198	5	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	2127	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	3250	+	EF177379|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK074850|FRMD8|83786|FERM domain containing 8##BC033851|FRMD8|83786|FERM domain containing 8##AK056778|FRMD8|83786|FERM domain containing 8##BC044658|FRMD8|83786|FERM domain containing 8##AK291678|FRMD8|83786|FERM domain containing 8##AK304363|FRMD8|83786|FERM domain containing 8##BC051695|FRMD8|83786|FERM domain containing 8##NM_031904|FRMD8|83786|FERM domain containing 8##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)	0.0	
chr1	223659899	223659970	reg1029653.p2	4.567	+	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	-93169	+	AK096265 AK000914 BC004888 AK296923 EF560748 AK295553 AY358495 NM_001037175 NM_017982	-122463	-	TSC_hg19_v1_chr1_-_223316591 NM_003268	-343328	-	TSC_hg19_v1_chr1_-_223853364 BC157893	193436	-	TSC_hg19_v1_chr1_-_223853404 NM_001143962	193483	-	AK316211 AK297800 NM_001146068	229339	+	NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65##AK096265|SUSD4|55061|sushi domain containing 4##AK000914|SUSD4|55061|sushi domain containing 4##BC004888|SUSD4|55061|sushi domain containing 4##AK296923|SUSD4|55061|sushi domain containing 4##EF560748|SUSD4|55061|sushi domain containing 4##AK295553|SUSD4|55061|sushi domain containing 4##AY358495|SUSD4|55061|sushi domain containing 4##NM_001037175|SUSD4|55061|sushi domain containing 4##NM_017982|SUSD4|55061|sushi domain containing 4##NM_003268|TLR5|7100|toll-like receptor 5##BC157893|CAPN8|388743|calpain 8##NM_001143962|CAPN8|388743|calpain 8##AK316211|CAPN2|824|calpain 2, (m/II) large subunit##AK297800|CAPN2|824|calpain 2, (m/II) large subunit##NM_001146068|CAPN2|824|calpain 2, (m/II) large subunit	0.032688	
chr14	29990894	29990993	reg1032728.p2	4.567	+	TSC_hg19_v1_chr14_+_29241992 BX248251	-748948	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-754030	+	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	-754715	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	405911	-	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	1037417	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	1100581	+	BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1	0.933842	CTCF.p2:-12:0.934
chr15	70972065	70972178	reg1028436.p1	4.567	+	TSC_hg19_v1_chr15_-_70878946 BC040579	-93177	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-581878	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-581894	-	BC016881 AL834243 NM_001008224 AK055435	22506	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	83721	-	CU675231 BC006082 BC009446 BC014018 AL833876 BC039153 TSC_hg19_v1_chr15_-_71146496 AK130092 AF443828 AF443829 AK002058 NM_018357 NM_197958	174347	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC006082|LARP6|55323|La ribonucleoprotein domain family, member 6##BC009446|LARP6|55323|La ribonucleoprotein domain family, member 6##BC014018|LARP6|55323|La ribonucleoprotein domain family, member 6##AL833876|LARP6|55323|La ribonucleoprotein domain family, member 6##BC039153|LARP6|55323|La ribonucleoprotein domain family, member 6##AK130092|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443828|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443829|LARP6|55323|La ribonucleoprotein domain family, member 6##AK002058|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_018357|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_197958|LARP6|55323|La ribonucleoprotein domain family, member 6	0.874004	CTCF.p2:21:0.874
chr17	35253983	35254133	reg1032486.p1	4.567	+	AK292307 NM_024864 BC072411	-296007	+	TSC_hg19_v1_chr17_+_34948329 NM_024308 AK315735 AY358712 BC002731	-305770	+	TSC_hg19_v1_chr17_+_34901498 AK290687 AF126964	-352546	+	BC084573 TSC_hg19_v1_chr17_-_35293961	39882	-	BC020470 NM_005568	40713	+	AK057229 NM_012138 TSC_hg19_v1_chr17_+_35306253 AF083208 BC000591 AJ249940 AB385572 CU674286 DQ892097 DQ895290	52241	+	AK292307|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024864|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##BC072411|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024308|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK315735|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AY358712|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##BC002731|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK290687|GGNBP2|79893|gametogenetin binding protein 2##AF126964|GGNBP2|79893|gametogenetin binding protein 2##BC020470|LHX1|3975|LIM homeobox 1##NM_005568|LHX1|3975|LIM homeobox 1##AK057229|AATF|26574|apoptosis antagonizing transcription factor##NM_012138|AATF|26574|apoptosis antagonizing transcription factor##AF083208|AATF|26574|apoptosis antagonizing transcription factor##BC000591|AATF|26574|apoptosis antagonizing transcription factor##AJ249940|AATF|26574|apoptosis antagonizing transcription factor##DQ892097|AATF|26574|apoptosis antagonizing transcription factor##DQ895290|AATF|26574|apoptosis antagonizing transcription factor	0.924127	CTCF.p2:13:0.924
chr17	36507272	36507410	reg1026558.p1	4.567	+	AY584611 NM_001004334	-7649	-	TSC_hg19_v1_chr17_+_36453138 AK172741 AK225031 HQ258365 BC006235	-54204	+	NM_032351 AK293605 BC130382 BC130384 TSC_hg19_v1_chr17_+_36453120	-54287	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	522	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	77364	+	TSC_hg19_v1_chr17_-_36729122 AK295027	221781	-	AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##AK172741|MRPL45|84311|mitochondrial ribosomal protein L45##AK225031|MRPL45|84311|mitochondrial ribosomal protein L45##HQ258365|MRPL45|84311|mitochondrial ribosomal protein L45##BC006235|MRPL45|84311|mitochondrial ribosomal protein L45##NM_032351|MRPL45|84311|mitochondrial ribosomal protein L45##AK293605|MRPL45|84311|mitochondrial ribosomal protein L45##BC130382|MRPL45|84311|mitochondrial ribosomal protein L45##BC130384|MRPL45|84311|mitochondrial ribosomal protein L45##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1	0.0	
chr4	165871008	165871155	reg1019281.p2	4.567	+	AK289711 NM_001166373	-566675	-	NM_012403	-752219	-	AB463878 AK000675 AK301408 NM_017923	-1336366	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	7021	+	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	7070	+	BC089393 NM_001012414	27736	-	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61	0.925774	CTCF.p2:15:0.926
chr4	56915238	56915322	reg1029833.p2	4.567	+	AK023683 NM_025009 TSC_hg19_v1_chr4_+_56815093 BC136535 BC136536	-100189	+	TSC_hg19_v1_chr4_+_56719840 BC094751 NM_001024924 NM_018261 NM_178237 AK001755 AK027413	-195415	+	DQ891295 DQ894479 BC012908 NM_006681 X76029 TSC_hg19_v1_chr4_-_56502465	-412868	-	AK126014 NM_020722	121080	+	AF516672 AY422212 BC142709 TSC_hg19_v1_chr4_-_57253644 AF161436 AK303733 BC141824 AK294332 AY314787 BC015096 NM_181806 AK316296 AK304309 BX648853	338347	-	AB590152 CU678610 DQ893484 DQ896410 TSC_hg19_v1_chr4_-_57301775 AK290942 BC004200 U00238 AK222759 D13757 AK312297 NM_002703	386476	-	AK023683|CEP135|9662|centrosomal protein 135kDa##NM_025009|CEP135|9662|centrosomal protein 135kDa##BC136535|CEP135|9662|centrosomal protein 135kDa##BC136536|CEP135|9662|centrosomal protein 135kDa##BC094751|EXOC1|55763|exocyst complex component 1##NM_001024924|EXOC1|55763|exocyst complex component 1##NM_018261|EXOC1|55763|exocyst complex component 1##NM_178237|EXOC1|55763|exocyst complex component 1##AK001755|EXOC1|55763|exocyst complex component 1##AK027413|EXOC1|55763|exocyst complex component 1##DQ891295|NMU|10874|neuromedin U##DQ894479|NMU|10874|neuromedin U##BC012908|NMU|10874|neuromedin U##NM_006681|NMU|10874|neuromedin U##X76029|NMU|10874|neuromedin U##AK126014|KIAA1211|57482|KIAA1211##NM_020722|KIAA1211|57482|KIAA1211##AF516672|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AY422212|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC142709|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AF161436|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK303733|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC141824|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK294332|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AY314787|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC015096|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##NM_181806|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK316296|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK304309|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BX648853|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##DQ893484|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##DQ896410|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##AK290942|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##BC004200|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##U00238|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##AK222759|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##D13757|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##AK312297|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##NM_002703|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase	0.0	
chr7	138610833	138611012	reg1021142.p2	4.567	+	BC109304 BC109305 AF245517 AK292945 NM_020632 NM_130840	-128028	-	BC131697 AK055841 NM_001085429 BC058028	-128199	+	NM_130841	-152141	-	TSC_hg19_v1_chr7_-_138666114 AM989468 AM989469 AM989472 AM989473 AM989474 NM_001164665 NM_020910	55311	-	TSC_hg19_v1_chr7_-_138720787 BC008842 NM_080660 BC020784	109912	-	AK055851 BX647974 TSC_hg19_v1_chr7_-_138794101	183179	-	BC109304|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC109305|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AF245517|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AK292945|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_020632|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_130840|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC131697|TMEM213|155006|transmembrane protein 213##AK055841|TMEM213|155006|transmembrane protein 213##NM_001085429|TMEM213|155006|transmembrane protein 213##BC058028|TMEM213|155006|transmembrane protein 213##NM_130841|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AM989468|KIAA1549|57670|KIAA1549##AM989469|KIAA1549|57670|KIAA1549##NM_001164665|KIAA1549|57670|KIAA1549##NM_020910|KIAA1549|57670|KIAA1549##BC008842|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##NM_080660|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##BC020784|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##AK055851|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BX647974|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1	0.0	
chr9	70662881	70662991	reg1033461.p2	4.567	+	TSC_hg19_v1_chr9_-_70490188 NM_001024916 NM_201453	-172760	-	BC141856 TSC_hg19_v1_chr9_-_70490153 BC067803 AK292585	-172786	-	AK293173 TSC_hg19_v1_chr9_-_70490138	-172796	-	NM_201453 AK293173 AY344633 AK297912 BC069006 BC082271 AF265442 CU688346	193956	+	AY344641 AY344642 NM_199135 BC137365 BC137366 EU446685 BC103887	254888	+	BC033073 NM_021965	308878	+	NM_001024916|CBWD5|220869|COBW domain containing 5##NM_201453|CBWD3|445571|COBW domain containing 3##BC141856|CBWD5|220869|COBW domain containing 5##BC067803|CBWD5|220869|COBW domain containing 5##AK292585|CBWD5|220869|COBW domain containing 5##AK293173|CBWD6|644019|COBW domain containing 6##NM_201453|CBWD3|445571|COBW domain containing 3##AK293173|CBWD6|644019|COBW domain containing 6##AY344633|CBWD3|445571|COBW domain containing 3##AK297912|CBWD3|445571|COBW domain containing 3##BC069006|CBWD6|644019|COBW domain containing 6##BC082271|CBWD5|220869|COBW domain containing 5##AF265442|CBWD5|220869|COBW domain containing 5##AY344641|FOXD4L3|286380|forkhead box D4-like 3##AY344642|FOXD4L3|286380|forkhead box D4-like 3##NM_199135|FOXD4L3|286380|forkhead box D4-like 3##BC137365|FOXD4L6|653404|forkhead box D4-like 6##BC137366|FOXD4L6|653404|forkhead box D4-like 6##EU446685|FOXD4L6|653404|forkhead box D4-like 6##BC103887|FOXD4L6|653404|forkhead box D4-like 6##BC033073|PGM5|5239|phosphoglucomutase 5##NM_021965|PGM5|5239|phosphoglucomutase 5	0.666566	CTCF.p2:94:0.486
chrX	114996521	114996701	reg1006470.p2	4.567	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-168743	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-199569	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-201005	+	BC003645 TSC_hg19_v1_chrX_-_115085443	88828	-	AK313927 NM_000686 X87723 U16957	305384	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	571156	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr10	104135146	104135240	reg1030392.p1	4.566	+	TSC_hg19_v1_chr10_+_104005308 AF068755 D87435 BC117681 BC117682	-129826	+	NM_001199378 NM_001199379 NM_004193 BC057804 BC068543 TSC_hg19_v1_chr10_+_104005288 BC094763 AK025330 BC032543	-129914	+	BC011642 NM_005029	-133964	-	NM_001077493 TSC_hg19_v1_chr10_+_104154290 BC002844 NM_001077494 S76638	19097	+	NM_002502 X61498 X61499 TSC_hg19_v1_chr10_+_104155501 AK292654	20278	+	TSC_hg19_v1_chr10_-_104178575 BC037332	43379	-	AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199378|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199379|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC011642|PITX3|5309|paired-like homeodomain 3##NM_005029|PITX3|5309|paired-like homeodomain 3##NM_001077493|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC002844|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_001077494|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##S76638|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_002502|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61498|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61499|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##AK292654|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC037332|PSD|5662|pleckstrin and Sec7 domain containing	0.0	
chr10	63738814	63738962	reg1028485.p1	4.566	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-77457	+	NM_032199	-77876	+	BC041932 NM_173554	-316170	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	70208	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	289651	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	395155	+	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365	0.021215	
chr18	74846184	74846307	reg1029005.p1	4.566	+	TSC_hg19_v1_chr18_-_74844774 NM_001025100 NM_001025101	-1466	-	TSC_hg19_v1_chr18_-_74844720 BC065248 AB208986 L18865	-1528	-	TSC_hg19_v1_chr18_-_74729052 AK314553 NM_001025081 NM_001025090 NM_001025092 NM_002385 AK293922	-117178	-	TSC_hg19_v1_chr18_+_74961925 NM_001480	115721	+	BC016792 TSC_hg19_v1_chr18_-_75705702	859447	-	BC129827 BC148296 NM_171999	1894029	+	NM_001025100|MBP|4155|myelin basic protein##NM_001025101|MBP|4155|myelin basic protein##BC065248|MBP|4155|myelin basic protein##AB208986|MBP|4155|myelin basic protein##L18865|MBP|4155|myelin basic protein##AK314553|MBP|4155|myelin basic protein##NM_001025081|MBP|4155|myelin basic protein##NM_001025090|MBP|4155|myelin basic protein##NM_001025092|MBP|4155|myelin basic protein##NM_002385|MBP|4155|myelin basic protein##AK293922|MBP|4155|myelin basic protein##NM_001480|GALR1|2587|galanin receptor 1##BC148296|SALL3|27164|sal-like 3 (Drosophila)##NM_171999|SALL3|27164|sal-like 3 (Drosophila)	0.069128	
chr2	171084137	171084318	reg1030305.p2	4.566	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	-49542	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-400269	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-402842	-	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	487631	+	TSC_hg19_v1_chr2_+_171571942 AB464708	487750	+	TSC_hg19_v1_chr2_+_171572707 BC069026	488483	+	AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##BC069026|SP5|389058|Sp5 transcription factor	0.0	
chr22	32914989	32915088	reg1027561.p2	4.566	+	NM_001033024 TSC_hg19_v1_chr22_+_32871279 AK297841 AK301716	-43758	+	TSC_hg19_v1_chr22_+_32870997 BX648151 BX648220	-44037	+	TSC_hg19_v1_chr22_+_32870950 AK291972 AF233225 AB385082 AM392740 CU013088 CU013376 EU176789 EU176790	-44078	+	NM_000362	281763	+	TSC_hg19_v1_chr22_+_33197690 AK311702 AK314871 AK298126 BC013086 U14394 AX801509 U02571 S78453 U67195	282656	+	BC014277 TSC_hg19_v1_chr22_+_33197759	282714	+	NM_001033024|FBXO7|25793|F-box protein 7##AK297841|FBXO7|25793|F-box protein 7##AK301716|FBXO7|25793|F-box protein 7##BX648151|FBXO7|25793|F-box protein 7##BX648220|FBXO7|25793|F-box protein 7##AK291972|FBXO7|25793|F-box protein 7##AF233225|FBXO7|25793|F-box protein 7##AM392740|FBXO7|25793|F-box protein 7##CU013088|FBXO7|25793|F-box protein 7##CU013376|FBXO7|25793|F-box protein 7##EU176789|FBXO7|25793|F-box protein 7##EU176790|FBXO7|25793|F-box protein 7##NM_000362|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK314871|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK298126|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC013086|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U14394|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U02571|TIMP3|7078|TIMP metallopeptidase inhibitor 3##S78453|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U67195|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3	0.998566	CTCF.p2:-10:0.999
chr3	139812134	139812254	reg1031410.p1	4.566	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-157942	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-158176	+	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	-415366	-	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	584765	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	848573	+	TSC_hg19_v1_chr3_+_140770412 BC051354	958284	+	AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.09273	
chr3	50648975	50649089	reg1032812.p1	4.566	+	AF188706 NM_001171741	-40593	-	TSC_hg19_v1_chr3_+_50606919 BX537562 NM_016173 AK314023 AF172244 AK124369	-42084	+	AK124438 AK311093 TSC_hg19_v1_chr3_-_50605192 BC034766 AK313128 AK308074 AK309486 AL833938 AK130227 NM_001171740 NM_001171743 NM_016210	-43889	-	CU689192 AB528903 BC064354 TSC_hg19_v1_chr3_-_50649104	60	-	TSC_hg19_v1_chr3_-_50649206 AF035947 D83532 BC031590 AF132297 AK313850 NM_013324 NM_145071	185	-	NM_001243926 BC068497	283	+	AF188706|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171741|C3orf18|51161|chromosome 3 open reading frame 18##BX537562|HEMK1|51409|HemK methyltransferase family member 1##NM_016173|HEMK1|51409|HemK methyltransferase family member 1##AK314023|HEMK1|51409|HemK methyltransferase family member 1##AF172244|HEMK1|51409|HemK methyltransferase family member 1##AK124369|HEMK1|51409|HemK methyltransferase family member 1##AK124438|C3orf18|51161|chromosome 3 open reading frame 18##AK311093|C3orf18|51161|chromosome 3 open reading frame 18##BC034766|C3orf18|51161|chromosome 3 open reading frame 18##AK313128|C3orf18|51161|chromosome 3 open reading frame 18##AK308074|C3orf18|51161|chromosome 3 open reading frame 18##AK309486|C3orf18|51161|chromosome 3 open reading frame 18##AL833938|C3orf18|51161|chromosome 3 open reading frame 18##AK130227|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171740|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171743|C3orf18|51161|chromosome 3 open reading frame 18##NM_016210|C3orf18|51161|chromosome 3 open reading frame 18##BC064354|CISH|1154|cytokine inducible SH2-containing protein##AF035947|CISH|1154|cytokine inducible SH2-containing protein##D83532|CISH|1154|cytokine inducible SH2-containing protein##BC031590|CISH|1154|cytokine inducible SH2-containing protein##AF132297|CISH|1154|cytokine inducible SH2-containing protein##AK313850|CISH|1154|cytokine inducible SH2-containing protein##NM_013324|CISH|1154|cytokine inducible SH2-containing protein##NM_145071|CISH|1154|cytokine inducible SH2-containing protein##NM_001243926|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC068497|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3	0.0	
chr3	90327018	90327086	reg1043175.p1	4.566	+	M83941 AF213460 BC026247 TSC_hg19_v1_chr3_+_89156840 AK291411 AB384708	-1170202	+	AF213459 NM_005233 NM_182644 BC063282 TSC_hg19_v1_chr3_+_89156770	-1170331	+	AL832398 NM_173824 TSC_hg19_v1_chr3_+_88199126 BC024188 AK297719 AK313547	-2128024	+	AB590252 DQ892389 DQ895602 TSC_hg19_v1_chr3_-_93692741 Y00692 AK292994	3365624	-	TSC_hg19_v1_chr3_-_93692932 BC015801 NM_000313	3365866	-	TSC_hg19_v1_chr3_+_93698998 BC073842 NM_001174150 NM_001174151 NM_144996 NM_182896 CR936753 BC094725 BC104033 BC104034 BC104035 BC104036 AK299284 BC031093 AK296994 BC062993 BC015439 CR936763 AL713789 CR936756	3371975	+	M83941|EPHA3|2042|EPH receptor A3##AF213460|EPHA3|2042|EPH receptor A3##BC026247|EPHA3|2042|EPH receptor A3##AK291411|EPHA3|2042|EPH receptor A3##AF213459|EPHA3|2042|EPH receptor A3##NM_005233|EPHA3|2042|EPH receptor A3##NM_182644|EPHA3|2042|EPH receptor A3##BC063282|EPHA3|2042|EPH receptor A3##AL832398|C3orf38|285237|chromosome 3 open reading frame 38##NM_173824|C3orf38|285237|chromosome 3 open reading frame 38##BC024188|C3orf38|285237|chromosome 3 open reading frame 38##AK297719|C3orf38|285237|chromosome 3 open reading frame 38##AK313547|C3orf38|285237|chromosome 3 open reading frame 38##DQ892389|PROS1|5627|protein S (alpha)##DQ895602|PROS1|5627|protein S (alpha)##Y00692|PROS1|5627|protein S (alpha)##AK292994|PROS1|5627|protein S (alpha)##BC015801|PROS1|5627|protein S (alpha)##NM_000313|PROS1|5627|protein S (alpha)##BC073842|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174150|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174151|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_144996|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_182896|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936753|ARL13B|200894|ADP-ribosylation factor-like 13B##BC094725|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104033|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104034|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104035|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104036|ARL13B|200894|ADP-ribosylation factor-like 13B##AK299284|ARL13B|200894|ADP-ribosylation factor-like 13B##BC031093|ARL13B|200894|ADP-ribosylation factor-like 13B##AK296994|ARL13B|200894|ADP-ribosylation factor-like 13B##BC062993|ARL13B|200894|ADP-ribosylation factor-like 13B##BC015439|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936763|ARL13B|200894|ADP-ribosylation factor-like 13B##AL713789|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936756|ARL13B|200894|ADP-ribosylation factor-like 13B	0.0	
chr6	332954	333020	reg1021915.p4	4.566	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-40490	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-40902	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	58777	+	AF508547 BC101697 BC101699 NM_148959	323966	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	360103	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chr7	1223237	1223319	reg1018113.p2	4.566	+	TSC_hg19_v1_chr7_+_1200097 AK090593	-23165	+	TSC_hg19_v1_chr7_-_1199853 NM_182491	-23439	-	AK290170 TSC_hg19_v1_chr7_-_1199815	-23464	-	TSC_hg19_v1_chr7_+_1272552 NM_001080461	49324	+	CU691530 EU832111 EU832205 AK074068 BC037988 TSC_hg19_v1_chr7_-_1499102	275755	-	TSC_hg19_v1_chr7_-_1499107 AK027124 NM_182924	275829	-	NM_182491|ZFAND2A|90637|zinc finger, AN1-type domain 2A##AK290170|ZFAND2A|90637|zinc finger, AN1-type domain 2A##NM_001080461|UNCX|340260|UNC homeobox##EU832111|MICALL2|79778|MICAL-like 2##EU832205|MICALL2|79778|MICAL-like 2##AK074068|MICALL2|79778|MICAL-like 2##BC037988|MICALL2|79778|MICAL-like 2##AK027124|MICALL2|79778|MICAL-like 2##NM_182924|MICALL2|79778|MICAL-like 2	0.976048	CTCF.p2:12:0.976
chr15	23405826	23405944	reg1037944.p1	4.565	+	TSC_hg19_v1_chr15_-_23378229 AF041081 AF041080	-27641	-	TSC_hg19_v1_chr15_-_23378205 AK308640	-27695	-	DQ309040 BC048987 TSC_hg19_v1_chr15_-_23208467	-197474	-	NM_005664	404568	+	AK309383 TSC_hg19_v1_chr15_+_23810820 BC044639 BC013970 BC070293 EU446987 CU692226	404983	+	NM_019066 TSC_hg19_v1_chr15_-_23893004	487119	-	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041080|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AK308640|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##DQ309040|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC048987|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##NM_005664|MKRN3|7681|makorin ring finger protein 3##BC044639|MKRN3|7681|makorin ring finger protein 3##BC070293|MKRN3|7681|makorin ring finger protein 3##EU446987|MKRN3|7681|makorin ring finger protein 3##NM_019066|MAGEL2|54551|MAGE-like 2	0.79594	CTCF.p2:3:0.796
chr17	65542883	65543008	reg1029721.p1	4.565	+	BC007905 NM_012417 NM_181671	-169022	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-169357	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-169536	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	171105	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	278757	+	AK293224 TSC_hg19_v1_chr17_+_65822221	279272	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.0	
chr18	3998864	3998994	reg1031957.p2	4.565	+	AK294777 AK294717 NM_001242762 NM_001242763	-124202	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	-124645	-	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	-153599	-	AK304101 TSC_hg19_v1_chr18_-_4455255	456324	-	AK316099 NM_001242761 NM_004746 TSC_hg19_v1_chr18_-_4455271	456341	-	TSC_hg19_v1_chr18_-_5197257 NM_001145194	1198323	-	AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK304101|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK316099|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242761|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_004746|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42	0.998012	CTCF.p2:6:0.998
chr19	48317101	48317181	reg1028955.p2	4.565	+	BC137501 BC141863 BC144673 AK097640 NM_198479	-10304	-	NM_003009 TSC_hg19_v1_chr19_+_48281965 BC039597 BC032546 BC047893 BC000581 U67171 AF015283	-35215	+	TSC_hg19_v1_chr19_+_48248802 AK303180 AK297877 AK303918 AK309788 AK301117 AF182076 BC006311 BC013203 AY535000 CU679611 DQ892724 DQ895973 AK024486 BC013235 BC013307 BC014009 BC039869 BC007248 BC004229 AF296124 AL359336 AL359335	-68306	+	NM_000554 DQ426868 BC016664 DQ426867 BC053672	8014	+	CU676700 DQ891165 DQ894346 U08024 L20000 X70222 TSC_hg19_v1_chr19_-_48389554 X84816 U08025	72397	-	BC020755 TSC_hg19_v1_chr19_-_48389573 L02337 S43859 AK313415 AK289380 NM_003167	72471	-	BC137501|TPRX1|284355|tetra-peptide repeat homeobox 1##BC141863|TPRX1|284355|tetra-peptide repeat homeobox 1##BC144673|TPRX1|284355|tetra-peptide repeat homeobox 1##AK097640|TPRX1|284355|tetra-peptide repeat homeobox 1##NM_198479|TPRX1|284355|tetra-peptide repeat homeobox 1##NM_003009|SEPW1|6415|selenoprotein W, 1##BC039597|SEPW1|6415|selenoprotein W, 1##BC032546|SEPW1|6415|selenoprotein W, 1##BC047893|SEPW1|6415|selenoprotein W, 1##BC000581|SEPW1|6415|selenoprotein W, 1##U67171|SEPW1|6415|selenoprotein W, 1##AF015283|SEPW1|6415|selenoprotein W, 1##AK297877|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK303918|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK309788|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK301117|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF182076|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC006311|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013203|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AY535000|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ892724|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ895973|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK024486|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013235|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013307|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC014009|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC039869|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC007248|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC004229|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF296124|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359336|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359335|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##NM_000554|CRX|1406|cone-rod homeobox##DQ426868|CRX|1406|cone-rod homeobox##BC016664|CRX|1406|cone-rod homeobox##DQ426867|CRX|1406|cone-rod homeobox##BC053672|CRX|1406|cone-rod homeobox##DQ891165|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ894346|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08024|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L20000|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X70222|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X84816|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08025|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##BC020755|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L02337|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##S43859|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##AK313415|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##AK289380|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##NM_003167|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1	0.999934	CTCF.p2:10:1.000
chr5	41856605	41856727	reg1001138.p1	4.565	+	AB464014 TSC_hg19_v1_chr5_-_41510701 AK127142 BX648329 NM_001005473	-345988	-	BC035723 NM_001115131	-595127	-	J05024 J04506 AK292509 TSC_hg19_v1_chr5_-_41213635 J05064 AK313673 NM_000065	-643077	-	AB528366 CR457049 CU679223 DQ891805 DQ894989 TSC_hg19_v1_chr5_-_41870488 AK312327	13808	-	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	13917	-	TSC_hg19_v1_chr5_-_41870706 NM_000436	14080	-	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BC035723|C6|729|complement component 6##NM_001115131|C6|729|complement component 6##J05024|C6|729|complement component 6##J04506|C6|729|complement component 6##AK292509|C6|729|complement component 6##J05064|C6|729|complement component 6##AK313673|C6|729|complement component 6##NM_000065|C6|729|complement component 6##CR457049|OXCT1|5019|3-oxoacid CoA transferase 1##DQ891805|OXCT1|5019|3-oxoacid CoA transferase 1##DQ894989|OXCT1|5019|3-oxoacid CoA transferase 1##AK312327|OXCT1|5019|3-oxoacid CoA transferase 1##BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1	0.0	
chr7	36061051	36061181	reg1025274.p1	4.565	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	-220264	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	-220283	+	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	-220406	+	TSC_hg19_v1_chr7_+_36192789 NM_030636	131689	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	131767	+	TSC_hg19_v1_chr7_+_36193025 AB051493	131939	+	DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##NM_030636|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1	0.873363	CTCF.p2:-23:0.873
chr10	61834113	61834221	reg1029219.p2	4.564	+	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-167843	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	-167966	-	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-364443	-	AK292927 AK092527 NM_001149	66549	-	U13616 NM_020987	315393	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	498523	-	BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##S72869|CCDC6|8030|coiled-coil domain containing 6##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.0	
chr10	99038374	99038475	reg1030254.p1	4.564	+	AB017167 TSC_hg19_v1_chr10_-_98945702 BC028105 AB011537 BC146761 NM_003061 BC139909	-92739	-	TSC_hg19_v1_chr10_-_98945606 BC146851	-92829	-	AY029183 AB383997 TSC_hg19_v1_chr10_-_98945570	-92950	-	TSC_hg19_v1_chr10_-_99052389 AK090447 AK303055	13950	-	TSC_hg19_v1_chr10_-_99052395 AY336750 DQ338460 BX648189 BC113888 BC114490 CR749412	13985	-	BX648194 NM_001204300 NM_032900 TSC_hg19_v1_chr10_-_99052429	14015	-	AB017167|SLIT1|6585|slit homolog 1 (Drosophila)##BC028105|SLIT1|6585|slit homolog 1 (Drosophila)##AB011537|SLIT1|6585|slit homolog 1 (Drosophila)##BC146761|SLIT1|6585|slit homolog 1 (Drosophila)##NM_003061|SLIT1|6585|slit homolog 1 (Drosophila)##BC139909|SLIT1|6585|slit homolog 1 (Drosophila)##BC146851|SLIT1|6585|slit homolog 1 (Drosophila)##AY029183|SLIT1|6585|slit homolog 1 (Drosophila)##AK090447|ARHGAP19|84986|Rho GTPase activating protein 19##AK303055|ARHGAP19|84986|Rho GTPase activating protein 19##AY336750|ARHGAP19-SLIT1|100533184|ARHGAP19-SLIT1 readthrough##DQ338460|ARHGAP19|84986|Rho GTPase activating protein 19##BX648189|ARHGAP19|84986|Rho GTPase activating protein 19##BC113888|ARHGAP19|84986|Rho GTPase activating protein 19##BC114490|ARHGAP19|84986|Rho GTPase activating protein 19##CR749412|ARHGAP19|84986|Rho GTPase activating protein 19##BX648194|ARHGAP19|84986|Rho GTPase activating protein 19##NM_001204300|ARHGAP19|84986|Rho GTPase activating protein 19##NM_032900|ARHGAP19|84986|Rho GTPase activating protein 19	0.991461	CTCF.p2:3:0.991
chr1	27021918	27022098	reg1020619.p1	4.564	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	-149650	+	TSC_hg19_v1_chr1_+_26872335 AK092955	-149685	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-165673	+	NM_006015 NM_139135 AF231056	514	+	AB210022 AF219114 AB051293 AF265208 TSC_hg19_v1_chr1_+_27024003	1961	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	79280	+	AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.0	
chr13	43659715	43659838	reg1029099.p1	4.564	+	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	-62074	+	AF126743 AY248898 NM_013238	-62427	+	CU692822 DQ892268 DQ895469 TSC_hg19_v1_chr13_-_43566378 AL831953 AF396928 BC023660 AK313877 AK292461 NM_001002264 NM_033255	-93406	-	BC024178 NM_001127615	543834	-	TSC_hg19_v1_chr13_-_44361107 BC068521 NM_001242863 NM_017993	701307	-	NM_001128303	793643	+	BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AF126743|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY248898|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_013238|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##DQ892268|EPSTI1|94240|epithelial stromal interaction 1 (breast)##DQ895469|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AL831953|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AF396928|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC023660|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK313877|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK292461|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_001002264|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_033255|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC024178|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001127615|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC068521|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001242863|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_017993|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1	0.804147	CTCF.p2:19:0.804
chr17	16693698	16693826	reg1031716.p1	4.564	+	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-100158	+	AK131401 NM_020787	-136601	-	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-221266	-	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	181642	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	252202	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	415851	-	EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6	0.500791	CTCF.p2:18:0.488
chr6	87864753	87864919	reg1024533.p2	4.564	+	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	-60018	-	NM_000865	-217813	+	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	-1476399	-	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	453	+	TSC_hg19_v1_chr6_+_87964930 AL832366	100144	+	BC016386 TSC_hg19_v1_chr6_+_87967437	102599	+	V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292##AL832366|ZNF292|23036|zinc finger protein 292##BC016386|ZNF292|23036|zinc finger protein 292	0.0	
chr7	28336649	28336768	reg1031582.p2	4.564	+	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	-116302	-	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	-116507	-	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-556889	+	L05913 NM_182899	2231	+	TSC_hg19_v1_chr7_+_28448986 BC087859	112280	+	L05515 NM_182898	115435	+	AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5##BC087859|LOC401317|401317|uncharacterized LOC401317##L05515|CREB5|9586|cAMP responsive element binding protein 5##NM_182898|CREB5|9586|cAMP responsive element binding protein 5	0.739433	CTCF.p2:10:0.739
chr7	91481825	91481955	reg1029111.p1	4.564	+	TSC_hg19_v1_chr7_+_90893747 AB017363 NM_003505 AF072872 BC051271 AK314996	-588014	+	BC017719 TSC_hg19_v1_chr7_+_90893724	-588189	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	-1142730	+	TSC_hg19_v1_chr7_-_91509979 BC108648 AL832861 AK298469 AK313641 NM_006980 Y09615 AK222730 AK311568	28125	-	TSC_hg19_v1_chr7_+_91570181 NM_005751 NM_147185 AJ131693 AF026245 BC015533 AB019691 AY803272 CU677341	88391	+	AB590319 CU689330 DQ891311 DQ894495 TSC_hg19_v1_chr7_-_91763765 D55653 BC018429	281832	-	AB017363|FZD1|8321|frizzled family receptor 1##NM_003505|FZD1|8321|frizzled family receptor 1##AF072872|FZD1|8321|frizzled family receptor 1##BC051271|FZD1|8321|frizzled family receptor 1##AK314996|FZD1|8321|frizzled family receptor 1##BC017719|FZD1|8321|frizzled family receptor 1##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14##BC108648|MTERF|7978|mitochondrial transcription termination factor##AL832861|MTERF|7978|mitochondrial transcription termination factor##AK298469|MTERF|7978|mitochondrial transcription termination factor##AK313641|MTERF|7978|mitochondrial transcription termination factor##NM_006980|MTERF|7978|mitochondrial transcription termination factor##Y09615|MTERF|7978|mitochondrial transcription termination factor##AK222730|MTERF|7978|mitochondrial transcription termination factor##NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##DQ891311|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##DQ894495|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##D55653|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##BC018429|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1	0.91009	CTCF.p2:-26:0.910
chr15	31618560	31618629	reg1031821.p2	4.563	+	NM_001243538	-95545	-	GQ502181 HM135791 NM_001252020	-165166	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-224677	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	744	+	AJ430383 NM_130901	328947	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	544235	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.0	
chr17	17400455	17400617	reg1001815.p2	4.563	+	AB528221 AF153192 AF498923 AM392981 AM393158 AM393716 CU676146 AF172846 AF069506 BC042688 AF177335 TSC_hg19_v1_chr17_-_17399710 BC018041 AK294073 AK312796 NM_001199989 NM_016084	-934	-	TSC_hg19_v1_chr17_+_17398334 CU676147	-2150	+	TSC_hg19_v1_chr17_+_17380313 AK001055 NM_018019 BC000647 BC010906 BC104988 BC112029 AB463869	-20221	+	CR457099 TSC_hg19_v1_chr17_-_17480354	79803	-	AF176807 NM_148173	80242	-	AF176806 TSC_hg19_v1_chr17_-_17485724	85171	-	AF153192|RASD1|51655|RAS, dexamethasone-induced 1##AF498923|RASD1|51655|RAS, dexamethasone-induced 1##AM392981|RASD1|51655|RAS, dexamethasone-induced 1##AM393158|RASD1|51655|RAS, dexamethasone-induced 1##AM393716|RASD1|51655|RAS, dexamethasone-induced 1##AF172846|RASD1|51655|RAS, dexamethasone-induced 1##AF069506|RASD1|51655|RAS, dexamethasone-induced 1##BC042688|RASD1|51655|RAS, dexamethasone-induced 1##AF177335|RASD1|51655|RAS, dexamethasone-induced 1##BC018041|RASD1|51655|RAS, dexamethasone-induced 1##AK294073|RASD1|51655|RAS, dexamethasone-induced 1##AK312796|RASD1|51655|RAS, dexamethasone-induced 1##NM_001199989|RASD1|51655|RAS, dexamethasone-induced 1##NM_016084|RASD1|51655|RAS, dexamethasone-induced 1##AK001055|MED9|55090|mediator complex subunit 9##NM_018019|MED9|55090|mediator complex subunit 9##BC000647|MED9|55090|mediator complex subunit 9##BC010906|MED9|55090|mediator complex subunit 9##BC104988|MED9|55090|mediator complex subunit 9##BC112029|MED9|55090|mediator complex subunit 9##CR457099|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF176807|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_148173|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF176806|PEMT|10400|phosphatidylethanolamine N-methyltransferase	0.0	
chr19	10216660	10216841	reg1023293.p3	4.563	+	AY358276 BC142632 AB054064 NM_031917 AF230330	-3350	-	TSC_hg19_v1_chr19_+_10197045 AL137694 CU690214	-19688	+	BC026180 TSC_hg19_v1_chr19_+_10197007 AK002148 BC010847 BC035817	-19753	+	BC171852 NM_001040664 NM_001198690 NM_020230 BC033202 TSC_hg19_v1_chr19_+_10217035 BC009833 AJ292529 CU679511 AJ300588	239	+	NM_002566 BC073827	5454	+	AB528489 BT006889 CR457134 CU678971 DQ890616 DQ896801 AF020833 U96074 TSC_hg19_v1_chr19_-_10230579 AK293374 AF094850 AK309944 AK316040 AK291320 BC000733 BC008469 AK316335 AK315896 AK296377 AK311624 NM_003755	13816	-	AY358276|ANGPTL6|83854|angiopoietin-like 6##BC142632|ANGPTL6|83854|angiopoietin-like 6##AB054064|ANGPTL6|83854|angiopoietin-like 6##NM_031917|ANGPTL6|83854|angiopoietin-like 6##AF230330|ANGPTL6|83854|angiopoietin-like 6##AL137694|C19orf66|55337|chromosome 19 open reading frame 66##BC026180|C19orf66|55337|chromosome 19 open reading frame 66##AK002148|C19orf66|55337|chromosome 19 open reading frame 66##BC010847|C19orf66|55337|chromosome 19 open reading frame 66##BC035817|C19orf66|55337|chromosome 19 open reading frame 66##BC171852|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001040664|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001198690|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_020230|PPAN|56342|peter pan homolog (Drosophila)##BC033202|PPAN|56342|peter pan homolog (Drosophila)##BC009833|PPAN|56342|peter pan homolog (Drosophila)##AJ292529|PPAN|56342|peter pan homolog (Drosophila)##AJ300588|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_002566|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BC073827|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BT006889|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##CR457134|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##DQ890616|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##DQ896801|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AF020833|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##U96074|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK293374|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AF094850|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK309944|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK316040|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK291320|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##BC000733|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##BC008469|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK316335|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK315896|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK296377|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##NM_003755|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G	0.021336	
chr9	36980361	36980451	reg1027087.p1	4.563	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-407482	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-579231	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-579509	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	54010	-	TSC_hg19_v1_chr9_+_37079908 AK091718	99500	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	99602	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.152449	
chrX	78514977	78515128	reg1027927.p2	4.563	+	AF345567 BC104922 BC104924 NM_032553	-88584	+	NM_014499 NM_198333 AK313218 AK292138 BC051875	-314180	+	NM_005296 AK314134	-511844	+	CR456875 CU691874 EU446983 AY359051 AB209310 BC040437 BC010511 TSC_hg19_v1_chrX_-_78622829 AK223327 AK303238 AF038953 BC034485	107731	-	AK313154 NM_001171581 NM_004867	107975	-	AK097514 NM_001109878 NM_001109879	755202	+	AF345567|GPR174|84636|G protein-coupled receptor 174##BC104922|GPR174|84636|G protein-coupled receptor 174##BC104924|GPR174|84636|G protein-coupled receptor 174##NM_032553|GPR174|84636|G protein-coupled receptor 174##NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##CR456875|ITM2A|9452|integral membrane protein 2A##EU446983|ITM2A|9452|integral membrane protein 2A##AY359051|ITM2A|9452|integral membrane protein 2A##AB209310|ITM2A|9452|integral membrane protein 2A##BC040437|ITM2A|9452|integral membrane protein 2A##BC010511|ITM2A|9452|integral membrane protein 2A##AK223327|ITM2A|9452|integral membrane protein 2A##AK303238|ITM2A|9452|integral membrane protein 2A##AF038953|ITM2A|9452|integral membrane protein 2A##BC034485|ITM2A|9452|integral membrane protein 2A##AK313154|ITM2A|9452|integral membrane protein 2A##NM_001171581|ITM2A|9452|integral membrane protein 2A##NM_004867|ITM2A|9452|integral membrane protein 2A##AK097514|TBX22|50945|T-box 22##NM_001109878|TBX22|50945|T-box 22##NM_001109879|TBX22|50945|T-box 22	0.0	
chr15	93425990	93426115	reg1028012.p2	4.562	+	BC110328 TSC_hg19_v1_chr15_-_93277463	-148663	-	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	-227173	-	AK057393 NM_153040	-411146	+	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	17434	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	17528	+	AK295909 TSC_hg19_v1_chr15_+_93447798	21708	+	BC110328|FAM174B|400451|family with sequence similarity 174, member B##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2##AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2	0.0	
chr16	70463878	70464038	reg1020737.p1	4.562	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-83130	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-130810	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-130882	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	9023	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	24541	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	38882	+	AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##AK096727|FUK|197258|fucokinase	0.0	
chr16	90074127	90074208	reg1029143.p1	4.562	+	NM_145039 TSC_hg19_v1_chr16_-_90039285	-34905	-	TSC_hg19_v1_chr16_+_90039043 BC045753	-35120	+	TSC_hg19_v1_chr16_+_90038996 AK126911 AK056488 AK097044 AK091293 AX746898	-35158	+	BC000700 NM_024043 AK090965 AX746707	2406	-	AK022644 TSC_hg19_v1_chr16_-_90085865 NM_001042610	11732	-	TSC_hg19_v1_chr16_-_90086275 AK308737	12102	-	NM_145039|CENPBD1|92806|CENPB DNA-binding domains containing 1##BC045753|AFG3L1P|172|AFG3 ATPase family gene 3-like 1 (S. cerevisiae), pseudogene##AK126911|AFG3L1P|172|AFG3 ATPase family gene 3-like 1 (S. cerevisiae), pseudogene##AK056488|AFG3L1P|172|AFG3 ATPase family gene 3-like 1 (S. cerevisiae), pseudogene##AK097044|AFG3L1P|172|AFG3 ATPase family gene 3-like 1 (S. cerevisiae), pseudogene##AK091293|AFG3L1P|172|AFG3 ATPase family gene 3-like 1 (S. cerevisiae), pseudogene##BC000700|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1##NM_024043|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1##AK090965|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1##AK022644|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1##NM_001042610|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1##AK308737|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	0.0	
chr17	15848038	15848154	reg1028942.p1	4.562	+	NM_178571 AK292544 AK315847 BC028414 BC047400	-212503	+	AK315062 BC015730 BC025260 AK092259 AB058777 TSC_hg19_v1_chr17_+_15603063	-245041	+	NM_001130842 NM_020652 AK296547 TSC_hg19_v1_chr17_+_15603030	-245133	+	NM_000676 X68487	134	+	TSC_hg19_v1_chr17_+_15848443 M97759 BC025722 AB464451 DQ891714 DQ894891 CU693036 AY136748	396	+	BC105128 BC112107 NM_017775 TSC_hg19_v1_chr17_+_15902780 AK056878	54669	+	NM_178571|TBC1D26|353149|TBC1 domain family, member 26##AK292544|TBC1D28|254272|TBC1 domain family, member 28##AK315847|TBC1D26|353149|TBC1 domain family, member 26##BC028414|TBC1D26|353149|TBC1 domain family, member 26##BC047400|TBC1D26|353149|TBC1 domain family, member 26##AK315062|ZNF286A|57335|zinc finger protein 286A##BC015730|ZNF286A|57335|zinc finger protein 286A##BC025260|ZNF286A|57335|zinc finger protein 286A##AK092259|ZNF286A|57335|zinc finger protein 286A##NM_001130842|ZNF286A|57335|zinc finger protein 286A##NM_020652|ZNF286A|57335|zinc finger protein 286A##NM_000676|ADORA2B|136|adenosine A2b receptor##X68487|ADORA2B|136|adenosine A2b receptor##M97759|ADORA2B|136|adenosine A2b receptor##BC025722|ADORA2B|136|adenosine A2b receptor##DQ891714|ADORA2B|136|adenosine A2b receptor##DQ894891|ADORA2B|136|adenosine A2b receptor##AY136748|ADORA2B|136|adenosine A2b receptor##BC105128|TTC19|54902|tetratricopeptide repeat domain 19##BC112107|TTC19|54902|tetratricopeptide repeat domain 19##NM_017775|TTC19|54902|tetratricopeptide repeat domain 19##AK056878|TTC19|54902|tetratricopeptide repeat domain 19	0.0	
chr17	46662578	46662759	reg1001812.p1	4.562	+	TSC_hg19_v1_chr17_-_46655544 AL137449 BC049204 NM_024015	-7025	-	NM_002146 AK027609	-10840	-	EU446481 BC074805 BC074806 X16665 NM_002145	-40335	-	AK315102 TSC_hg19_v1_chr17_-_46667604 AK316245 AK291182	4945	-	AB464575 BC117247 NM_002147 TSC_hg19_v1_chr17_-_46671142 AK314964	8432	-	M92299 TSC_hg19_v1_chr17_-_46671405	8699	-	AL137449|HOXB4|3214|homeobox B4##BC049204|HOXB4|3214|homeobox B4##NM_024015|HOXB4|3214|homeobox B4##NM_002146|HOXB3|3213|homeobox B3##AK027609|HOXB3|3213|homeobox B3##EU446481|HOXB2|3212|homeobox B2##BC074805|HOXB2|3212|homeobox B2##BC074806|HOXB2|3212|homeobox B2##X16665|HOXB2|3212|homeobox B2##NM_002145|HOXB2|3212|homeobox B2##AK315102|HOXB3|3213|homeobox B3##AK316245|HOXB3|3213|homeobox B3##AK291182|HOXB3|3213|homeobox B3##BC117247|HOXB5|3215|homeobox B5##NM_002147|HOXB5|3215|homeobox B5##AK314964|HOXB5|3215|homeobox B5##M92299|HOXB5|3215|homeobox B5	0.0	
chr18	71909790	71909874	reg1026515.p1	4.562	+	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	-94038	+	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	-94805	-	AF448838 BC050329 NM_001201465 NM_138966	-1375023	-	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	49347	-	CR749350 NM_001174123	73277	+	TSC_hg19_v1_chr18_-_72124545 NM_001044369	214697	-	NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15##AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)##CR749350|C18orf63|644041|chromosome 18 open reading frame 63##NM_001174123|C18orf63|644041|chromosome 18 open reading frame 63##NM_001044369|FAM69C|125704|family with sequence similarity 69, member C	0.043532	
chr19	13539302	13539416	reg1030614.p1	4.562	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-275179	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-278067	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-278220	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	77817	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	303220	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	319360	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.044498	
chr19	18388384	18388490	reg1029225.p2	4.562	+	AK057466 AK302431 AL136867 BC112932 NM_001145304 NM_001145305 NM_025249	-3195	-	NM_000923 U66346	-29428	-	AK300888 AK300983 TSC_hg19_v1_chr19_-_18337249 NM_001098818 U88713	-51178	-	TSC_hg19_v1_chr19_+_18391286 AB593186	2844	+	BC169275 TSC_hg19_v1_chr19_-_18391478	3022	-	BC169273 TSC_hg19_v1_chr19_-_18392160 X51346	3668	-	AK057466|KIAA1683|80726|KIAA1683##AK302431|KIAA1683|80726|KIAA1683##AL136867|KIAA1683|80726|KIAA1683##BC112932|KIAA1683|80726|KIAA1683##NM_001145304|KIAA1683|80726|KIAA1683##NM_001145305|KIAA1683|80726|KIAA1683##NM_025249|KIAA1683|80726|KIAA1683##NM_000923|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U66346|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK300888|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK300983|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##NM_001098818|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U88713|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##BC169273|JUND|3727|jun D proto-oncogene##X51346|JUND|3727|jun D proto-oncogene	0.688348	CTCF.p2:0:0.688
chr19	6769394	6769514	reg1032506.p2	4.562	+	TSC_hg19_v1_chr19_-_6767447 AK225386 AK292781 AK299406 AK310659 BC006281 AF124249 AY358406 NM_005490 AK290293	-1947	-	TSC_hg19_v1_chr19_+_6739712 NM_004240 AK313296 AB007845 AB072596 AK223109 AF502289 AJ000414 AY081141 BC013002 CU680464 DQ892747 DQ895993 AF380114 BT006698 BT020167 BT020171 CR536513	-29720	+	TSC_hg19_v1_chr19_-_6737615 BC146909 AX775899 NM_001080452	-31836	-	TSC_hg19_v1_chr19_+_6772718 NM_005428 AK225710 AK313307	3270	+	TSC_hg19_v1_chr19_+_6772811 AB590871	3354	+	BC059395 NM_001974 X81479 AK297003 AK131562 AK290401 AK291518 AK313495 AK297011 CU687372	118143	+	AK225386|SH2D3A|10045|SH2 domain containing 3A##AK292781|SH2D3A|10045|SH2 domain containing 3A##AK299406|SH2D3A|10045|SH2 domain containing 3A##AK310659|SH2D3A|10045|SH2 domain containing 3A##BC006281|SH2D3A|10045|SH2 domain containing 3A##AF124249|SH2D3A|10045|SH2 domain containing 3A##AY358406|SH2D3A|10045|SH2 domain containing 3A##NM_005490|SH2D3A|10045|SH2 domain containing 3A##AK290293|SH2D3A|10045|SH2 domain containing 3A##NM_004240|TRIP10|9322|thyroid hormone receptor interactor 10##AK313296|TRIP10|9322|thyroid hormone receptor interactor 10##AB007845|TRIP10|9322|thyroid hormone receptor interactor 10##AB072596|TRIP10|9322|thyroid hormone receptor interactor 10##AK223109|TRIP10|9322|thyroid hormone receptor interactor 10##AF502289|TRIP10|9322|thyroid hormone receptor interactor 10##AJ000414|TRIP10|9322|thyroid hormone receptor interactor 10##AY081141|TRIP10|9322|thyroid hormone receptor interactor 10##BC013002|TRIP10|9322|thyroid hormone receptor interactor 10##DQ892747|TRIP10|9322|thyroid hormone receptor interactor 10##DQ895993|TRIP10|9322|thyroid hormone receptor interactor 10##AF380114|TRIP10|9322|thyroid hormone receptor interactor 10##BT006698|TRIP10|9322|thyroid hormone receptor interactor 10##BT020167|TRIP10|9322|thyroid hormone receptor interactor 10##BT020171|TRIP10|9322|thyroid hormone receptor interactor 10##CR536513|TRIP10|9322|thyroid hormone receptor interactor 10##BC146909|GPR108|56927|G protein-coupled receptor 108##AX775899|GPR108|56927|G protein-coupled receptor 108##NM_001080452|GPR108|56927|G protein-coupled receptor 108##NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor##BC059395|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_001974|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##X81479|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297003|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK131562|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK290401|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK291518|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK313495|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297011|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1	0.790928	CTCF.p2:26:0.743
chr20	35121564	35121690	reg1025218.p2	4.562	+	NM_183006 BC153874 TSC_hg19_v1_chr20_+_35090197 BC108706	-31452	+	TSC_hg19_v1_chr20_+_35089870 NM_001042486 AK001681	-31758	+	NM_014902	-126184	+	TSC_hg19_v1_chr20_+_35169892 NM_006097 NM_181526	48259	+	TSC_hg19_v1_chr20_+_35169921 D82057 AK130879 AK097235 BC002648 AF176042 AF176043	48296	+	BC039668 TSC_hg19_v1_chr20_-_35201701	80064	-	NM_183006|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC153874|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC108706|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_001042486|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##AK001681|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_006097|MYL9|10398|myosin, light chain 9, regulatory##NM_181526|MYL9|10398|myosin, light chain 9, regulatory##D82057|MYL9|10398|myosin, light chain 9, regulatory##AK130879|MYL9|10398|myosin, light chain 9, regulatory##AK097235|MYL9|10398|myosin, light chain 9, regulatory##BC002648|MYL9|10398|myosin, light chain 9, regulatory##AF176042|MYL9|10398|myosin, light chain 9, regulatory##AF176043|MYL9|10398|myosin, light chain 9, regulatory	0.012515	
chr21	43498151	43498284	reg1031689.p1	4.562	+	AB096965 AY771619 AY771620 NM_001004416 NM_173568	-6792	+	AB051810 AB051811 NM_001199527 NM_001199528	-15150	+	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	-67746	-	AF323660 NM_207627 AF323661 NM_207628	121642	+	AF323662 NM_207629	137969	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	141076	+	AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323662|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207629|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	0.0	
chr3	118603824	118603971	reg1007719.p2	4.562	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-2439524	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-2439566	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-3261478	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	149636	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	149786	-	AK097667 NM_152538 AK292387	261000	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.0	
chr4	40978601	40978778	reg1001863.p2	4.562	+	BC088372 TSC_hg19_v1_chr4_-_40936716	-42011	-	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-119514	-	BC042401 NM_024677 BC036568 AK024063	-226743	+	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	237880	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	280207	+	TSC_hg19_v1_chr4_+_41258913 BC000332 BC018838	280229	+	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.0	
chr4	88976196	88976290	reg1030736.p1	4.562	+	TSC_hg19_v1_chr4_+_88928803 BC112261 BC112263 NM_000297 U50928	-47435	+	AY956318 X13694 TSC_hg19_v1_chr4_+_88896900	-79330	+	TSC_hg19_v1_chr4_+_88896868 AK290104 M83248 AK315461 AF052124	-79364	+	BC021281 NM_004827 AF151530	103794	-	TSC_hg19_v1_chr4_-_89205714 AL834271 AK314417 AK054678 AY157615 AY994097 AF351614 BC020850 BC037552	229484	-	AY435431 NM_152542 TSC_hg19_v1_chr4_-_89205908 AL834167	229660	-	BC112261|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##BC112263|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##NM_000297|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##U50928|PKD2|5311|polycystic kidney disease 2 (autosomal dominant)##AY956318|SPP1|6696|secreted phosphoprotein 1##X13694|SPP1|6696|secreted phosphoprotein 1##AK290104|SPP1|6696|secreted phosphoprotein 1##M83248|SPP1|6696|secreted phosphoprotein 1##AK315461|SPP1|6696|secreted phosphoprotein 1##AF052124|SPP1|6696|secreted phosphoprotein 1##BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2##NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2##AL834271|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AK314417|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AK054678|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY157615|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY994097|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AF351614|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC020850|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC037552|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY435431|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##NM_152542|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AL834167|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K	0.098029	
chr5	176005459	176005575	reg1029576.p1	4.562	+	NM_017675	-29175	+	AK315055 NM_001171976	-36006	+	TSC_hg19_v1_chr5_-_175964932 AK302385	-40593	-	TSC_hg19_v1_chr5_-_176037158 BC052950 NM_052899 AB067480	31620	-	S69965 BC002902 TSC_hg19_v1_chr5_-_176057536 JF960950 JF960951 JF960952 JF960953 NM_001001502 NM_003085	51939	-	NM_001099408	52165	+	NM_017675|CDHR2|54825|cadherin-related family member 2##AK315055|CDHR2|54825|cadherin-related family member 2##NM_001171976|CDHR2|54825|cadherin-related family member 2##AK302385|RNF44|22838|ring finger protein 44##BC052950|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1##NM_052899|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1##AB067480|GPRIN1|114787|G protein regulated inducer of neurite outgrowth 1##S69965|SNCB|6620|synuclein, beta##BC002902|SNCB|6620|synuclein, beta##JF960950|SNCB|6620|synuclein, beta##JF960951|SNCB|6620|synuclein, beta##JF960952|SNCB|6620|synuclein, beta##JF960953|SNCB|6620|synuclein, beta##NM_001001502|SNCB|6620|synuclein, beta##NM_003085|SNCB|6620|synuclein, beta##NM_001099408|EIF4E1B|253314|eukaryotic translation initiation factor 4E family member 1B	0.751218	CTCF.p2:1:0.751
chr7	110235841	110235986	reg1038270.p1	4.562	+	NM_001024607	-1711277	-	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-2025539	+	TSC_hg19_v1_chr7_+_108210292 AK092204	-2025615	+	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	495210	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	966571	-	TSC_hg19_v1_chr7_-_111428948 AK294820	1193098	-	NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AK092204|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK294820|DOCK4|9732|dedicator of cytokinesis 4	0.0	
chr12	106695720	106695900	reg1026735.p2	4.561	+	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	-53963	-	AB011109 BC152462 NM_014840	-162000	-	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	-163128	-	TSC_hg19_v1_chr12_+_106696595 BC033617 NM_152772 BC017872 AF306671 AF306858 AK314055	762	+	NM_018082 TSC_hg19_v1_chr12_+_106751498 BX537447	55660	+	TSC_hg19_v1_chr12_+_106751589 BC046238 AK291635 AY092084	55767	+	BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4##AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC033617|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_152772|TCP11L2|255394|t-complex 11 (mouse)-like 2##BC017872|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306671|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306858|TCP11L2|255394|t-complex 11 (mouse)-like 2##AK314055|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BC046238|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AK291635|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AY092084|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	0.0	
chr14	23288879	23289037	reg1029493.p2	4.561	+	AB020532 BX161519 NM_001126105	-3900	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	-4326	-	TSC_hg19_v1_chr14_-_23284568 AK025377	-4379	-	Y18474 BX248291 AF092032 AJ130718 NM_001126106	7	-	TSC_hg19_v1_chr14_+_23299095 AK096946 NM_178336 NM_180982 NM_181304 NM_181305 NM_181306 NM_181307	10133	+	TSC_hg19_v1_chr14_+_23299104 AK292011 AK000450 BX248749 BC055381 BC068070	10152	+	AB020532|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX161519|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126105|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK025377|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK096946|MRPL52|122704|mitochondrial ribosomal protein L52##NM_178336|MRPL52|122704|mitochondrial ribosomal protein L52##NM_180982|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181304|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181305|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181306|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181307|MRPL52|122704|mitochondrial ribosomal protein L52##AK292011|MRPL52|122704|mitochondrial ribosomal protein L52##AK000450|MRPL52|122704|mitochondrial ribosomal protein L52##BX248749|MRPL52|122704|mitochondrial ribosomal protein L52##BC055381|MRPL52|122704|mitochondrial ribosomal protein L52##BC068070|MRPL52|122704|mitochondrial ribosomal protein L52	0.0	
chr14	94419783	94419877	reg1028011.p1	4.561	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	-26122	+	NM_001207071 NM_138344 AK093387 AX748092	-34582	+	AY225516 AY225517 NM_178013	-165065	-	AB056723 NM_016150	3936	-	AK303686 TSC_hg19_v1_chr14_-_94442905	23078	-	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	23246	-	NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2	0.073738	
chr15	55489282	55489434	reg1030597.p1	4.561	+	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	-179	-	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	-266	-	NM_001080534	-1184258	+	AF125393 NM_183234 U57094 U38654 NM_004580	73179	-	BC132800 BC136423 BC107680 NM_183236	73740	-	TSC_hg19_v1_chr15_-_55582012 AK312836 NM_183235	92633	-	BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family##BC132800|RAB27A|5873|RAB27A, member RAS oncogene family##BC136423|RAB27A|5873|RAB27A, member RAS oncogene family##BC107680|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183236|RAB27A|5873|RAB27A, member RAS oncogene family##AK312836|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183235|RAB27A|5873|RAB27A, member RAS oncogene family	0.555501	CTCF.p2:-4:0.556
chr15	82514036	82514129	reg1029773.p1	4.561	+	AB095929 BC111545 BC036211 TSC_hg19_v1_chr15_-_82338485	-175606	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	-175716	-	AK094145 TSC_hg19_v1_chr15_-_82336883	-177199	-	BC014628 TSC_hg19_v1_chr15_-_82555043 AK300348 AK056656 BX538332	40949	-	TSC_hg19_v1_chr15_-_82555076 NM_001040610 NM_024580	41007	-	TSC_hg19_v1_chr15_+_82555158 AL833762 NM_001008226 BC144647 AK304339	41071	+	AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)##BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)##BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##BC014628|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK300348|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK056656|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BX538332|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_001040610|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_024580|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AL833762|FAM154B|283726|family with sequence similarity 154, member B##NM_001008226|FAM154B|283726|family with sequence similarity 154, member B##AK304339|FAM154B|283726|family with sequence similarity 154, member B	0.015141	
chr19	1087820	1088001	reg1022404.p1	4.561	+	TSC_hg19_v1_chr19_+_1071219 AK128097	-16688	+	TSC_hg19_v1_chr19_+_1067558 BC035564	-20338	+	AK304271 TSC_hg19_v1_chr19_+_1067315 AK304765 D86976	-20584	+	AB464042 TSC_hg19_v1_chr19_-_1095353 AK295975 BC004441 D38251 J04965 AK312625 BC034144	7433	-	AK122813 TSC_hg19_v1_chr19_-_1095375	7465	-	TSC_hg19_v1_chr19_-_1095383 NM_002695	7482	-	AK128097|HMHA1|23526|histocompatibility (minor) HA-1##BC035564|HMHA1|23526|histocompatibility (minor) HA-1##AK304271|HMHA1|23526|histocompatibility (minor) HA-1##AK304765|HMHA1|23526|histocompatibility (minor) HA-1##D86976|HMHA1|23526|histocompatibility (minor) HA-1##AK295975|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##BC004441|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##D38251|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##J04965|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##AK312625|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##BC034144|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##AK122813|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa##NM_002695|POLR2E|5434|polymerase (RNA) II (DNA directed) polypeptide E, 25kDa	0.0	
chr5	158713578	158713695	reg1030257.p1	4.561	+	TSC_hg19_v1_chr5_+_158690297 AY444562 AK057996 BC013425	-23350	+	NM_145049	-23548	+	AK308394 NM_001199380	-76576	-	BC074723 M65272 NM_002187	43838	-	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	630189	+	TSC_hg19_v1_chr5_+_159436145 AK315262	722511	+	AY444562|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK057996|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##BC013425|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_145049|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK308394|RNF145|153830|ring finger protein 145##NM_001199380|RNF145|153830|ring finger protein 145##BC074723|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##M65272|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_002187|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##AK315262|TTC1|7265|tetratricopeptide repeat domain 1	0.367953	CTCF.p2:-16:0.368
chr11	48130987	48131123	reg1010603.p1	4.560	+	TSC_hg19_v1_chr11_+_48002270 AL359057 BC063417	-128696	+	D37781 TSC_hg19_v1_chr11_+_48002120	-128935	+	TSC_hg19_v1_chr11_+_48002110 NM_001098503 NM_002843 U10886	-128964	+	NM_001005470	107306	+	BC136935 BC136936 NM_001004727	135576	+	NM_001004726	154357	+	AL359057|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##BC063417|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##D37781|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_001098503|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_002843|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##U10886|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_001005470|OR4B1|119765|olfactory receptor, family 4, subfamily B, member 1##BC136935|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##BC136936|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##NM_001004727|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##NM_001004726|OR4X1|390113|olfactory receptor, family 4, subfamily X, member 1	0.976957	CTCF.p2:19:0.977
chr1	21651122	21651302	reg1032081.p1	4.560	+	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	-34278	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	-34504	-	D43698 TSC_hg19_v1_chr1_-_21606025 BX648351 NM_001113347	-45129	-	X98272 TSC_hg19_v1_chr1_-_21671998 NM_001113348	20768	-	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	115470	+	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	184647	+	Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##D43698|ECE1|1889|endothelin converting enzyme 1##BX648351|ECE1|1889|endothelin converting enzyme 1##NM_001113347|ECE1|1889|endothelin converting enzyme 1##X98272|ECE1|1889|endothelin converting enzyme 1##NM_001113348|ECE1|1889|endothelin converting enzyme 1##AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney	0.0	
chr16	66995034	66995142	reg1029182.p1	4.560	+	AM392781 AB527125 DQ893022 DQ896756 BC098417 BC071874 TSC_hg19_v1_chr16_+_66969468 AK222724 Y09616 D50579 U60553	-25633	+	TSC_hg19_v1_chr16_+_66968390 AL713761	-26695	+	TSC_hg19_v1_chr16_+_66968388 AK095522	-26711	+	TSC_hg19_v1_chr16_+_66995159 AK097538 NM_001185177 NM_024922 BC053670 AK000105 AY358609	64	+	AK025389 NM_001185176	6289	+	AK293061 NM_173815 AK296064	27441	+	AM392781|CES2|8824|carboxylesterase 2##DQ893022|CES2|8824|carboxylesterase 2##DQ896756|CES2|8824|carboxylesterase 2##BC098417|CES2|8824|carboxylesterase 2##BC071874|CES2|8824|carboxylesterase 2##AK222724|CES2|8824|carboxylesterase 2##Y09616|CES2|8824|carboxylesterase 2##D50579|CES2|8824|carboxylesterase 2##U60553|CES2|8824|carboxylesterase 2##AL713761|CES2|8824|carboxylesterase 2##AK095522|CES2|8824|carboxylesterase 2##AK097538|CES3|23491|carboxylesterase 3##NM_001185177|CES3|23491|carboxylesterase 3##NM_024922|CES3|23491|carboxylesterase 3##BC053670|CES3|23491|carboxylesterase 3##AK000105|CES3|23491|carboxylesterase 3##AY358609|CES3|23491|carboxylesterase 3##AK025389|CES3|23491|carboxylesterase 3##NM_001185176|CES3|23491|carboxylesterase 3##AK293061|CES4A|283848|carboxylesterase 4A##NM_173815|CES4A|283848|carboxylesterase 4A##AK296064|CES4A|283848|carboxylesterase 4A	0.01053	
chr19	47141764	47141912	reg1008245.p1	4.560	+	AF493875 NM_033258 BC095514	-3899	-	BC017857 L29016 D29634 BC110342 BC075814 D25418 TSC_hg19_v1_chr19_-_47128333 AK315278 NM_000960	-13515	-	AK310762 AK295927 TSC_hg19_v1_chr19_+_47105407	-36471	+	TSC_hg19_v1_chr19_-_47164311 BC034052 NM_145056	22532	-	BC015472 TSC_hg19_v1_chr19_-_47197232	55361	-	NM_001079882	75738	-	AF493875|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##NM_033258|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##BC095514|GNG8|94235|guanine nucleotide binding protein (G protein), gamma 8##L29016|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##D29634|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC110342|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##BC075814|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##D25418|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##AK315278|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##NM_000960|PTGIR|5739|prostaglandin I2 (prostacyclin) receptor (IP)##AK310762|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##AK295927|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##BC034052|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)##NM_145056|DACT3|147906|dapper, antagonist of beta-catenin, homolog 3 (Xenopus laevis)##BC015472|PRKD2|25865|protein kinase D2##NM_001079882|PRKD2|25865|protein kinase D2	0.569724	CTCF.p2:44:0.570
chr20	37435628	37435739	reg1032653.p1	4.560	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	-1329	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	-58571	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-82524	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	119306	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	119385	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	155306	+	AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35	0.273083	
chr9	130746301	130746462	reg1024922.p2	4.560	+	TSC_hg19_v1_chr9_-_130742813 AK058004 NM_001035254	-3572	-	BC137087 BC137088 BC047949 NM_203305 BC142952	-33450	-	BC015233 NM_003863	-45619	-	AK122729 NM_197956	83217	-	TSC_hg19_v1_chr9_+_130830492 AK290991 NM_001006641	84102	+	AJ619990 TSC_hg19_v1_chr9_+_130830643	84238	+	AK058004|FAM102A|399665|family with sequence similarity 102, member A##NM_001035254|FAM102A|399665|family with sequence similarity 102, member A##BC137087|FAM102A|399665|family with sequence similarity 102, member A##BC137088|FAM102A|399665|family with sequence similarity 102, member A##BC047949|FAM102A|399665|family with sequence similarity 102, member A##NM_203305|FAM102A|399665|family with sequence similarity 102, member A##BC142952|FAM102A|399665|family with sequence similarity 102, member A##BC015233|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##NM_003863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1##AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	0.0	
chr1	25355433	25355613	reg1027812.p1	4.559	+	BC013362 AK310945 NM_001031680 AF022726	-63981	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-98737	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-98784	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	203464	-	BC065040 TSC_hg19_v1_chr1_-_25573922	218400	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	218450	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr16	17545874	17546019	reg1029647.p3	4.559	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-1219416	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1219458	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-1219464	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	18859	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1027445	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1252150	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr21	34807498	34807679	reg1020172.p2	4.559	+	TSC_hg19_v1_chr21_-_34787167 DQ655977	-20380	-	TSC_hg19_v1_chr21_+_34775780 AB463788 DQ892320 DQ895522	-31775	+	AK314005 TSC_hg19_v1_chr21_+_34775746 AK292246	-31840	+	TSC_hg19_v1_chr21_-_34852209 AK310701	44599	-	TSC_hg19_v1_chr21_-_34852239 AY358634 BC000569 AK309977 BX537378 AF045606	44661	-	TSC_hg19_v1_chr21_-_34852282 NM_006134 DQ656043	44711	-	DQ892320|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##DQ895522|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK314005|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK292246|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK310701|TMEM50B|757|transmembrane protein 50B##AY358634|TMEM50B|757|transmembrane protein 50B##BC000569|TMEM50B|757|transmembrane protein 50B##AK309977|TMEM50B|757|transmembrane protein 50B##AF045606|TMEM50B|757|transmembrane protein 50B##NM_006134|TMEM50B|757|transmembrane protein 50B##DQ656043|TMEM50B|757|transmembrane protein 50B	0.0	
chr21	35320127	35320293	reg1026568.p1	4.559	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-32118	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-129540	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-305355	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	125631	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	125719	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	416136	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.0	
chr2	198221021	198221167	reg1030568.p1	4.559	+	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	-45575	-	TSC_hg19_v1_chr2_-_198175459 BC063622	-45621	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	-45712	-	AF054284 TSC_hg19_v1_chr2_-_198299735 BC039020 AF086296 BC064335	78635	-	BC046140 BC107883 TSC_hg19_v1_chr2_-_198299753 AK290470 BC029418 BC015530	78657	-	BC056155 AK308122 TSC_hg19_v1_chr2_-_198299772 NM_001005526 NM_012433 AK294851	78691	-	BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##AK124039|ANKRD44|91526|ankyrin repeat domain 44##AF054284|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC039020|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AF086296|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC064335|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC046140|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC107883|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AK290470|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC029418|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC015530|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC056155|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AK308122|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##NM_001005526|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##NM_012433|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AK294851|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	0.72838	CTCF.p2:10:0.728
chr13	103683788	103683969	reg1026116.p1	4.558	+	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-185392	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-185624	+	TSC_hg19_v1_chr13_+_103498240 NM_000123 BC031522 AF462447	-185669	+	NM_000452 U10417	35317	-	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	2434426	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	2434713	+	BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000123|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##BC031522|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AF462447|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator	0.0	
chr13	111228172	111228352	reg1024976.p2	4.558	+	AJ272065 CU693106 DQ892145 DQ895340 TSC_hg19_v1_chr13_-_111214042 AK000436 AK000446 NM_017817 BC026025	-14290	-	X05610 TSC_hg19_v1_chr13_+_111154089	-74211	+	TSC_hg19_v1_chr13_+_111138079 M24766	-90174	+	TSC_hg19_v1_chr13_+_111267870 NM_001242882 NM_001242883	39568	+	TSC_hg19_v1_chr13_+_111267898 AK093771 AK298917 AX748297 AK302117 AK057767 AK296758 NM_001242881 NM_018210 AK296227 AK024260 BC041028 AK001631 AK225129	39780	+	TSC_hg19_v1_chr13_-_111268694 AK095260	40436	-	AJ272065|RAB20|55647|RAB20, member RAS oncogene family##DQ892145|RAB20|55647|RAB20, member RAS oncogene family##DQ895340|RAB20|55647|RAB20, member RAS oncogene family##AK000436|RAB20|55647|RAB20, member RAS oncogene family##AK000446|RAB20|55647|RAB20, member RAS oncogene family##NM_017817|RAB20|55647|RAB20, member RAS oncogene family##BC026025|RAB20|55647|RAB20, member RAS oncogene family##X05610|COL4A2|1284|collagen, type IV, alpha 2##M24766|COL4A2|1284|collagen, type IV, alpha 2##NM_001242882|CARKD|55739|carbohydrate kinase domain containing##NM_001242883|CARKD|55739|carbohydrate kinase domain containing##AK093771|CARKD|55739|carbohydrate kinase domain containing##AK298917|CARKD|55739|carbohydrate kinase domain containing##AK302117|CARKD|55739|carbohydrate kinase domain containing##AK057767|CARKD|55739|carbohydrate kinase domain containing##AK296758|CARKD|55739|carbohydrate kinase domain containing##NM_001242881|CARKD|55739|carbohydrate kinase domain containing##NM_018210|CARKD|55739|carbohydrate kinase domain containing##AK296227|CARKD|55739|carbohydrate kinase domain containing##AK024260|CARKD|55739|carbohydrate kinase domain containing##BC041028|CARKD|55739|carbohydrate kinase domain containing##AK001631|CARKD|55739|carbohydrate kinase domain containing##AK225129|CARKD|55739|carbohydrate kinase domain containing	0.0	
chr16	1823447	1823562	reg1034169.p1	4.558	+	TSC_hg19_v1_chr16_+_1823191 EF452422 NM_001010865 AK074080	-249	+	TSC_hg19_v1_chr16_-_1823132 EF036486 AB527721 BC001182 NM_023936	-369	-	BC000250 NM_002513 TSC_hg19_v1_chr16_-_1821728	-1765	-	TSC_hg19_v1_chr16_-_1832545 BC041897 BC047441 BC007588 BC035065 BC024244 AK074190 AK302041 BC065515	8931	-	AK057850 TSC_hg19_v1_chr16_-_1832573	9069	-	TSC_hg19_v1_chr16_-_1832576 NM_080861	9088	-	EF452422|EME2|197342|essential meiotic endonuclease 1 homolog 2 (S. pombe)##NM_001010865|EME2|197342|essential meiotic endonuclease 1 homolog 2 (S. pombe)##AK074080|EME2|197342|essential meiotic endonuclease 1 homolog 2 (S. pombe)##BC001182|MRPS34|65993|mitochondrial ribosomal protein S34##NM_023936|MRPS34|65993|mitochondrial ribosomal protein S34##BC000250|NME3|4832|non-metastatic cells 3, protein expressed in##NM_002513|NME3|4832|non-metastatic cells 3, protein expressed in##BC041897|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3##BC047441|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3##BC007588|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3##BC035065|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3##BC024244|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3##AK074190|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3##BC065515|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3##AK057850|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3##NM_080861|SPSB3|90864|splA/ryanodine receptor domain and SOCS box containing 3	0.34087	CTCF.p2:24:0.341
chr3	25952654	25952753	reg1032141.p1	4.558	+	TSC_hg19_v1_chr3_+_25831590 NM_001145391 NM_017897 AK000611 AK304821 AK225260 BC008202	-121123	+	AK296047 NM_001145294	-121191	-	TSC_hg19_v1_chr3_-_25824955 NM_001145293 NM_001145295 NM_018297	-127733	-	BC067784 TSC_hg19_v1_chr3_+_26664296 AF396933 NM_052953	711597	+	TSC_hg19_v1_chr3_-_27410884 AK123061 NM_199347	1458210	-	AF047033 AF089726 NM_003615	1545541	-	NM_001145391|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##NM_017897|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK000611|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK304821|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK225260|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##BC008202|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK296047|NGLY1|55768|N-glycanase 1##NM_001145294|NGLY1|55768|N-glycanase 1##NM_001145293|NGLY1|55768|N-glycanase 1##NM_001145295|NGLY1|55768|N-glycanase 1##NM_018297|NGLY1|55768|N-glycanase 1##BC067784|LRRC3B|116135|leucine rich repeat containing 3B##AF396933|LRRC3B|116135|leucine rich repeat containing 3B##NM_052953|LRRC3B|116135|leucine rich repeat containing 3B##AK123061|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##NM_199347|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7	0.115013	
chr8	142096500	142096611	reg1022828.p1	4.558	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-85299	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-450931	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-574992	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	42182	+	AK128212 NM_001080431	142117	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	167635	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.522021	CTCF.p2:1:0.522
chr9	140632850	140633030	reg1028783.p1	4.558	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-119473	+	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	-119497	+	TSC_hg19_v1_chr9_-_140513273 BC011781 AF267857 NM_032937	-119647	-	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	5589	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	139294	+	TSC_hg19_v1_chr9_+_140918045 AB209467	285134	+	BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC011781|C9orf37|85026|chromosome 9 open reading frame 37##AF267857|C9orf37|85026|chromosome 9 open reading frame 37##NM_032937|C9orf37|85026|chromosome 9 open reading frame 37##AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit	0.0	
chr10	116901150	116901272	reg1033574.p2	4.557	+	TSC_hg19_v1_chr10_+_116853123 BC029592 BC035157 NM_207303 BC139916 BC139923 BC047716	-48063	+	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	-203248	+	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	-319662	+	AB590245 DQ892210 DQ895406 AF042080 U95847 U97144 BC014962 NM_145793	1130469	-	AK292886 NM_001145453	1131545	-	AF038421 NM_005264 TSC_hg19_v1_chr10_-_118033147	1131857	-	BC029592|ATRNL1|26033|attractin-like 1##BC035157|ATRNL1|26033|attractin-like 1##NM_207303|ATRNL1|26033|attractin-like 1##BC139916|ATRNL1|26033|attractin-like 1##BC139923|ATRNL1|26033|attractin-like 1##BC047716|ATRNL1|26033|attractin-like 1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##DQ892210|GFRA1|2674|GDNF family receptor alpha 1##DQ895406|GFRA1|2674|GDNF family receptor alpha 1##AF042080|GFRA1|2674|GDNF family receptor alpha 1##U95847|GFRA1|2674|GDNF family receptor alpha 1##U97144|GFRA1|2674|GDNF family receptor alpha 1##BC014962|GFRA1|2674|GDNF family receptor alpha 1##NM_145793|GFRA1|2674|GDNF family receptor alpha 1##AK292886|GFRA1|2674|GDNF family receptor alpha 1##NM_001145453|GFRA1|2674|GDNF family receptor alpha 1##AF038421|GFRA1|2674|GDNF family receptor alpha 1##NM_005264|GFRA1|2674|GDNF family receptor alpha 1	0.446276	CTCF.p2:4:0.446
chr1	19986427	19986534	reg1027869.p1	4.557	+	AK309257 NM_001204086	-14221	+	AK313265 NM_001204085	-14615	+	TSC_hg19_v1_chr1_+_19970804 NM_005380 BC012037 D28124	-15693	+	L41147 NM_000871	5299	+	TSC_hg19_v1_chr1_-_20126374 BX640987 NM_181719	139930	-	CR457228 BC051880 BC030960 AK000232 AK222991 NM_019062	155201	-	AK309257|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204086|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##AK313265|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_001204085|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##NM_005380|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##BC012037|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##D28124|NBL1|4681|neuroblastoma, suppression of tumorigenicity 1##L41147|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##NM_000871|HTR6|3362|5-hydroxytryptamine (serotonin) receptor 6##BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4##NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4##CR457228|RNF186|54546|ring finger protein 186##BC051880|RNF186|54546|ring finger protein 186##BC030960|RNF186|54546|ring finger protein 186##AK000232|RNF186|54546|ring finger protein 186##AK222991|RNF186|54546|ring finger protein 186##NM_019062|RNF186|54546|ring finger protein 186	0.664115	CTCF.p2:22:0.664
chr12	93639413	93639585	reg1032554.p1	4.557	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-316401	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-316456	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	-316561	-	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	132393	+	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	196187	-	TSC_hg19_v1_chr12_-_93835718 D83004	196219	-	NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.0	
chr13	25841956	25842074	reg1030735.p1	4.557	+	AK055049 BC041392 TSC_hg19_v1_chr13_-_25746427	-95650	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	-96198	-	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	-96355	-	AB384771 AF406619 AM392681 AM392837 CU691804 TSC_hg19_v1_chr13_-_25861510	19433	-	AK314587 TSC_hg19_v1_chr13_-_25861584 BC040012	19560	-	TSC_hg19_v1_chr13_-_25861621 AL832017 AK093237 AX748005 NM_004685	19640	-	AK055049|FAM123A|219287|family with sequence similarity 123A##BC041392|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##AF406619|MTMR6|9107|myotubularin related protein 6##AM392681|MTMR6|9107|myotubularin related protein 6##AM392837|MTMR6|9107|myotubularin related protein 6##AK314587|MTMR6|9107|myotubularin related protein 6##BC040012|MTMR6|9107|myotubularin related protein 6##AL832017|MTMR6|9107|myotubularin related protein 6##AK093237|MTMR6|9107|myotubularin related protein 6##NM_004685|MTMR6|9107|myotubularin related protein 6	0.319494	CTCF.p2:3:0.319
chr14	71609163	71609328	reg1030208.p1	4.557	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-234794	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-235112	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-333436	-	AF090989 AF090990 NM_015556	386796	+	AK294895 NM_001204423	789571	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	789908	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.0	
chr22	22901679	22901778	reg1026586.p2	4.557	+	BC014074 NM_206955 NM_206956 AK304593 TSC_hg19_v1_chr22_-_22901678 BC039731 U65011 NM_006115 NM_206953 NM_206954 BC022008	-134	-	BC053901 AK093108 NM_080740	-27124	-	AK097608 NM_080764	-38224	-	NM_199127 X98922 CU686896 BC069534	87070	+	TSC_hg19_v1_chr22_+_23010757 L29162	109032	+	TSC_hg19_v1_chr22_+_23029197 BC022823 L29157 AK057065 L29156 L29163 BC089418 CU692728 AY190819 AY190821 AY204762	127475	+	BC014074|PRAME|23532|preferentially expressed antigen in melanoma##NM_206955|PRAME|23532|preferentially expressed antigen in melanoma##NM_206956|PRAME|23532|preferentially expressed antigen in melanoma##AK304593|PRAME|23532|preferentially expressed antigen in melanoma##BC039731|PRAME|23532|preferentially expressed antigen in melanoma##U65011|PRAME|23532|preferentially expressed antigen in melanoma##NM_006115|PRAME|23532|preferentially expressed antigen in melanoma##NM_206953|PRAME|23532|preferentially expressed antigen in melanoma##NM_206954|PRAME|23532|preferentially expressed antigen in melanoma##BC022008|PRAME|23532|preferentially expressed antigen in melanoma##BC053901|ZNF280A|129025|zinc finger protein 280A##AK093108|ZNF280A|129025|zinc finger protein 280A##NM_080740|ZNF280A|129025|zinc finger protein 280A##AK097608|ZNF280B|140883|zinc finger protein 280B##NM_080764|ZNF280B|140883|zinc finger protein 280B##NM_199127|GGTLC2|91227|gamma-glutamyltransferase light chain 2##X98922|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC069534|GGTLC2|91227|gamma-glutamyltransferase light chain 2##BC022823|IGLV3-25|28793|immunoglobulin lambda variable 3-25##BC089418|IGLV3-25|28793|immunoglobulin lambda variable 3-25	0.999822	CTCF.p2:-16:1.000
chr3	63551035	63551147	reg1024682.p1	4.557	+	NM_144642 AK315958 AK312465	-122292	+	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	-287174	+	AF458662 AB593079 TSC_hg19_v1_chr3_-_62861056 AB032947 NM_003716 NM_183393 NM_183394	-690047	-	NM_001080537 AK126350	87267	+	TSC_hg19_v1_chr3_-_63849482 CU688000 CR457373 BC065012 AK225110	298381	-	TSC_hg19_v1_chr3_-_63849703 AK027098 AF104914 NM_025075	298565	-	NM_144642|SYNPR|132204|synaptoporin##AK315958|SYNPR|132204|synaptoporin##AK312465|SYNPR|132204|synaptoporin##NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin##AF458662|CADPS|8618|Ca++-dependent secretion activator##AB593079|CADPS|8618|Ca++-dependent secretion activator##AB032947|CADPS|8618|Ca++-dependent secretion activator##NM_003716|CADPS|8618|Ca++-dependent secretion activator##NM_183393|CADPS|8618|Ca++-dependent secretion activator##NM_183394|CADPS|8618|Ca++-dependent secretion activator##NM_001080537|SNTN|132203|sentan, cilia apical structure protein##AK126350|SNTN|132203|sentan, cilia apical structure protein##CR457373|THOC7|80145|THO complex 7 homolog (Drosophila)##BC065012|THOC7|80145|THO complex 7 homolog (Drosophila)##AK225110|THOC7|80145|THO complex 7 homolog (Drosophila)##AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)##AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)##NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)	0.0	
chr4	114199727	114199837	reg1007706.p2	4.557	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	-228948	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-460481	+	NM_015454 TSC_hg19_v1_chr4_+_113558677	-641114	+	TSC_hg19_v1_chr4_+_114214102 AK294720	14337	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	482499	-	TSC_hg19_v1_chr4_-_114682341 AK294517	482574	-	NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##NM_015454|LARP7|51574|La ribonucleoprotein domain family, member 7##AK294720|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK294517|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.0	
chr7	28133365	28133523	reg1028735.p1	4.557	+	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-353625	+	BC001764 TSC_hg19_v1_chr7_+_27779809	-353635	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	-353669	+	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	86757	-	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	86962	-	L05913 NM_182899	205495	+	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5	0.987053	CTCF.p2:0:0.987
chr8	42046539	42046689	reg1030554.p1	4.557	+	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	-36081	+	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	-137115	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-292304	-	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	18474	-	AK289387 AK290575 NM_000930 NM_033011 TSC_hg19_v1_chr8_-_42065195	18580	-	TSC_hg19_v1_chr8_+_42128819 NM_001190720 NM_001242778 NM_001556	82194	+	NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue##AK289387|PLAT|5327|plasminogen activator, tissue##AK290575|PLAT|5327|plasminogen activator, tissue##NM_000930|PLAT|5327|plasminogen activator, tissue##NM_033011|PLAT|5327|plasminogen activator, tissue##NM_001190720|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001242778|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001556|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	0.0	
chrX	39714247	39714388	reg1025188.p1	4.557	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-1050777	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-1050857	+	BC008908 NM_021242	-1051245	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	242375	-	BC114220 NM_001123383 NM_001123384	322264	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	725869	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.0	
chr11	62308964	62309086	reg1030547.p2	4.556	+	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	-122489	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	-204077	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	-204200	+	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	5211	-	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	5289	-	DQ185040 BT006677 CR407625 BC006509 BC006520 CU674184 CU677463 CU680700 BC000384 DQ891103 DQ894284 Z11531 AB527934 BC009865 BC015813 BC018857 BC018853 BC028179 TSC_hg19_v1_chr11_-_62341334 BC013918 AK092787 AK299876 AY542307 BC067738 AK129569 AK129618 AK300729 X63526 AK130026 AK300686 BC031012	32299	-	AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein##DQ185040|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BT006677|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##CR407625|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006509|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006520|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC000384|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ891103|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ894284|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##Z11531|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC009865|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC015813|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018857|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018853|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC028179|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC013918|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK092787|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK299876|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AY542307|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC067738|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129569|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129618|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300729|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##X63526|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK130026|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300686|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC031012|EEF1G|1937|eukaryotic translation elongation factor 1 gamma	0.0	
chr20	48315920	48316081	reg1032518.p1	4.556	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	-131311	-	BC110572 BC110573 NM_004975	-216821	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-420805	+	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	14230	-	AB004550 TSC_hg19_v1_chr20_-_48330359	14356	-	TSC_hg19_v1_chr20_-_48330471 NM_004776	14466	-	AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.0	
chr3	99527143	99527286	reg1034003.p2	4.556	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	-169764	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-906722	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-1075627	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	9531	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	67777	-	BC017987 NM_001042459 NM_182909 AF329092 AX776292	306138	-	AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like	0.793291	CTCF.p2:6:0.793
chr4	103531339	103531442	reg1025774.p1	4.556	+	TSC_hg19_v1_chr4_+_103422822 AK291450	-108567	+	TSC_hg19_v1_chr4_+_103422737 M55643	-108628	+	TSC_hg19_v1_chr4_+_103422554 M58603	-108835	+	EU009130 TSC_hg19_v1_chr4_-_103682110 AK300015 AB209846 AK312827	150696	-	TSC_hg19_v1_chr4_-_103682126 U60337 AK291598 BC015743	150745	-	NM_005908 TSC_hg19_v1_chr4_-_103682152	150774	-	AK291450|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##M55643|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##M58603|NFKB1|4790|nuclear factor of kappa light polypeptide gene enhancer in B-cells 1##EU009130|MANBA|4126|mannosidase, beta A, lysosomal##AK300015|MANBA|4126|mannosidase, beta A, lysosomal##AB209846|MANBA|4126|mannosidase, beta A, lysosomal##AK312827|MANBA|4126|mannosidase, beta A, lysosomal##U60337|MANBA|4126|mannosidase, beta A, lysosomal##AK291598|MANBA|4126|mannosidase, beta A, lysosomal##BC015743|MANBA|4126|mannosidase, beta A, lysosomal##NM_005908|MANBA|4126|mannosidase, beta A, lysosomal	0.637976	CTCF.p2:-4:0.638
chr4	40517396	40517576	reg1031361.p1	4.556	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	-902	-	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	-180041	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-318845	+	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	472	-	TSC_hg19_v1_chr4_-_40631882 BC034402 BC071585 NM_001098634	114379	-	AK304206 TSC_hg19_v1_chr4_-_40632775	115221	-	BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47##BC034402|RBM47|54502|RNA binding motif protein 47##BC071585|RBM47|54502|RNA binding motif protein 47##NM_001098634|RBM47|54502|RNA binding motif protein 47##AK304206|RBM47|54502|RNA binding motif protein 47	0.0	
chr5	89730057	89730177	reg1028039.p2	4.556	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	-24578	-	AL833268 AL833274 NM_001131005 NM_001193347	-1530223	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1544853	+	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	40065	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	40461	-	NM_006467 AK295434 U93868	40585	+	BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)	0.461801	CTCF.p2:15:0.462
chr9	107512880	107513002	reg1029015.p1	4.556	+	TSC_hg19_v1_chr9_+_107509977 BC005935 NM_015469 AK301410 AF161417 AK024015 AL117557 BC045830 CU675195	-2931	+	BC140916 AB587601 NM_001004484	-56261	+	AB463958 NM_001001956	-132457	-	AK002137 BC017914 BX647652 NM_018376 AK310397 BC005202	13511	+	AB055982 AB445477 TSC_hg19_v1_chr9_-_107665989	153056	-	AB037924 TSC_hg19_v1_chr9_-_107666055	153110	-	BC005935|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##NM_015469|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AK301410|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AF161417|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AK024015|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##AL117557|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##BC045830|NIPSNAP3A|25934|nipsnap homolog 3A (C. elegans)##BC140916|OR13D1|286365|olfactory receptor, family 13, subfamily D, member 1##NM_001004484|OR13D1|286365|olfactory receptor, family 13, subfamily D, member 1##NM_001001956|OR13C9|286362|olfactory receptor, family 13, subfamily C, member 9##AK002137|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC017914|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BX647652|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##NM_018376|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##AK310397|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##BC005202|NIPSNAP3B|55335|nipsnap homolog 3B (C. elegans)##AB055982|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AB445477|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AB037924|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1	0.71731	CTCF.p2:-38:0.717
chr12	1058650	1058831	reg1005811.p1	4.555	+	BC013629 TSC_hg19_v1_chr12_+_1017145	-41658	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	-195984	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	-196584	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	86	-	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	41712	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	644611	-	BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14	0.0	
chr3	153161867	153161993	reg1034624.p1	4.555	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-281882	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-281904	+	NM_002563 Z49205	-609195	+	AF086445 NM_001101337	40353	+	AK127282 NM_001251962	676861	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	677272	+	BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26	0.160353	
chr3	156855217	156855358	reg1010370.p1	4.555	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-311176	+	BC034397 NM_001184718	-460835	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-461872	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	22622	-	NM_020307 AK122738	23227	-	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	299363	+	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long	0.0	
chr3	178764856	178765016	reg1027497.p2	4.555	+	AF209747 NM_005832	-488384	+	BC017825 NM_181361	-510713	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1849877	-	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	24629	-	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	24690	-	TSC_hg19_v1_chr3_+_178866144 NM_006218 AK292940	101302	+	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3##NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	0.109175	
chr3	185701626	185701752	reg1001273.p2	4.555	+	TSC_hg19_v1_chr3_-_185655843 AK315632 NM_001243879 NM_004593	-45811	-	TSC_hg19_v1_chr3_-_185655809 AK098191	-45874	-	TSC_hg19_v1_chr3_-_185655803 BC000451 BC000160 U87836 AK308267	-45899	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	124657	-	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	125167	-	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	378245	-	AK315632|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_001243879|TRA2B|6434|transformer 2 beta homolog (Drosophila)##NM_004593|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK098191|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC000451|TRA2B|6434|transformer 2 beta homolog (Drosophila)##BC000160|TRA2B|6434|transformer 2 beta homolog (Drosophila)##U87836|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK308267|TRA2B|6434|transformer 2 beta homolog (Drosophila)##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa	0.0	
chr3	195913591	195913715	reg1025982.p1	4.555	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-104637	-	TSC_hg19_v1_chr3_-_195808984 M11507	-104670	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-104692	-	BC034801 BC022078 NM_001039617 AK122907	24628	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	29741	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	100882	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr5	126378433	126378537	reg1031948.p2	4.555	+	NM_178450	-12046	-	BC146948 BC146964 AF055007 TSC_hg19_v1_chr5_-_126366251 BC047569 AK290129	-12310	-	TSC_hg19_v1_chr5_+_126113050 AB527547 DQ891592 EU176582 CU680274	-265361	+	AK126569 NM_001164478 NM_001164479	30692	-	NM_032446 CR749437 AK307919 BC020198 AB058676 BC152478	248049	+	NM_130809 TSC_hg19_v1_chr5_+_126853331 AL831963 AL832056 AL832600 AJ427339 AJ441110 AJ496322 AJ515158 AJ515428 AJ515429 AK057437 BC017066	474866	+	NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146948|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146964|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AF055007|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC047569|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK290129|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##DQ891592|LMNB1|4001|lamin B1##EU176582|LMNB1|4001|lamin B1##AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63##NM_032446|MEGF10|84466|multiple EGF-like-domains 10##CR749437|MEGF10|84466|multiple EGF-like-domains 10##AK307919|MEGF10|84466|multiple EGF-like-domains 10##BC020198|MEGF10|84466|multiple EGF-like-domains 10##AB058676|MEGF10|84466|multiple EGF-like-domains 10##BC152478|MEGF10|84466|multiple EGF-like-domains 10##NM_130809|PRRC1|133619|proline-rich coiled-coil 1##AL831963|PRRC1|133619|proline-rich coiled-coil 1##AL832056|PRRC1|133619|proline-rich coiled-coil 1##AL832600|PRRC1|133619|proline-rich coiled-coil 1##AJ427339|PRRC1|133619|proline-rich coiled-coil 1##AJ441110|PRRC1|133619|proline-rich coiled-coil 1##AJ496322|PRRC1|133619|proline-rich coiled-coil 1##AJ515158|PRRC1|133619|proline-rich coiled-coil 1##AJ515428|PRRC1|133619|proline-rich coiled-coil 1##AJ515429|PRRC1|133619|proline-rich coiled-coil 1##AK057437|PRRC1|133619|proline-rich coiled-coil 1##BC017066|PRRC1|133619|proline-rich coiled-coil 1	0.291028	CTCF.p2:9:0.291
chr14	25512235	25512379	reg1033447.p1	4.554	+	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-408889	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-433446	-	AB590242 CR456807 CR541704 DQ893067 DQ896320 M16117 TSC_hg19_v1_chr14_-_25045457 AK225914 BC014460 NM_001911	-466861	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	6931	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1554681	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	3723921	+	AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##CR456807|CTSG|1511|cathepsin G##CR541704|CTSG|1511|cathepsin G##DQ893067|CTSG|1511|cathepsin G##DQ896320|CTSG|1511|cathepsin G##M16117|CTSG|1511|cathepsin G##AK225914|CTSG|1511|cathepsin G##BC014460|CTSG|1511|cathepsin G##NM_001911|CTSG|1511|cathepsin G##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1	0.768696	CTCF.p2:-12:0.769
chr1	54826237	54826336	reg1028953.p1	4.554	+	TSC_hg19_v1_chr1_+_54665866 AF151069 AF325707 AY421759 BC000041 CU674006	-160396	+	TSC_hg19_v1_chr1_+_54665855 AK026171	-160433	+	AK024572 NM_016491 TSC_hg19_v1_chr1_+_54665839	-160444	+	CU688156 AK289474 BC003605 BC127866 BC066365 TSC_hg19_v1_chr1_-_54871828 AF500116	45502	-	NM_018070 NM_145716 TSC_hg19_v1_chr1_-_54872066	45736	-	TSC_hg19_v1_chr1_-_54872087 NM_001009955	45798	-	AF151069|MRPL37|51253|mitochondrial ribosomal protein L37##AF325707|MRPL37|51253|mitochondrial ribosomal protein L37##AY421759|MRPL37|51253|mitochondrial ribosomal protein L37##BC000041|MRPL37|51253|mitochondrial ribosomal protein L37##AK026171|MRPL37|51253|mitochondrial ribosomal protein L37##AK024572|MRPL37|51253|mitochondrial ribosomal protein L37##NM_016491|MRPL37|51253|mitochondrial ribosomal protein L37##AK289474|SSBP3|23648|single stranded DNA binding protein 3##BC003605|SSBP3|23648|single stranded DNA binding protein 3##BC066365|SSBP3|23648|single stranded DNA binding protein 3##AF500116|SSBP3|23648|single stranded DNA binding protein 3##NM_018070|SSBP3|23648|single stranded DNA binding protein 3##NM_145716|SSBP3|23648|single stranded DNA binding protein 3##NM_001009955|SSBP3|23648|single stranded DNA binding protein 3	0.0	
chr17	77715962	77716077	reg1012411.p2	4.554	+	AY230663 BC041453 NM_178543 AY358622	-11130	+	NM_001082575	-237457	-	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-644989	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	35962	+	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	54888	-	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	97123	-	AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4	0.0	
chr17	9809397	9809497	reg1031641.p2	4.554	+	AB001838 BT009838 AB528320 DQ892822 DQ896068 BC001720 S62028 S45545 AB593156 NM_002903 S43855	-858	-	TSC_hg19_v1_chr17_+_9745847 BC041176 BC019818	-63588	+	AF105367 BC096261 BC096262 BC096264 NM_004246 BC096263	-80065	+	AJ224876 NM_003644 AK293834 AK315162	53324	-	AB385324 BT006891 DQ892802 DQ895910 CU674584 AB209030 AK294829 TSC_hg19_v1_chr17_-_9923322	113816	-	TSC_hg19_v1_chr17_-_9923331 AK309722	113945	-	AB001838|RCVRN|5957|recoverin##BT009838|RCVRN|5957|recoverin##DQ892822|RCVRN|5957|recoverin##DQ896068|RCVRN|5957|recoverin##BC001720|RCVRN|5957|recoverin##S62028|RCVRN|5957|recoverin##S45545|RCVRN|5957|recoverin##AB593156|RCVRN|5957|recoverin##NM_002903|RCVRN|5957|recoverin##S43855|RCVRN|5957|recoverin##BC041176|GLP2R|9340|glucagon-like peptide 2 receptor##BC019818|GLP2R|9340|glucagon-like peptide 2 receptor##AF105367|GLP2R|9340|glucagon-like peptide 2 receptor##BC096261|GLP2R|9340|glucagon-like peptide 2 receptor##BC096262|GLP2R|9340|glucagon-like peptide 2 receptor##BC096264|GLP2R|9340|glucagon-like peptide 2 receptor##NM_004246|GLP2R|9340|glucagon-like peptide 2 receptor##BC096263|GLP2R|9340|glucagon-like peptide 2 receptor##AJ224876|GAS7|8522|growth arrest-specific 7##NM_003644|GAS7|8522|growth arrest-specific 7##AK293834|GAS7|8522|growth arrest-specific 7##AK315162|GAS7|8522|growth arrest-specific 7##BT006891|GAS7|8522|growth arrest-specific 7##DQ892802|GAS7|8522|growth arrest-specific 7##DQ895910|GAS7|8522|growth arrest-specific 7##AB209030|GAS7|8522|growth arrest-specific 7##AK294829|GAS7|8522|growth arrest-specific 7##AK309722|GAS7|8522|growth arrest-specific 7	0.999112	CTCF.p2:-5:0.999
chr20	43594943	43595055	reg1028760.p1	4.554	+	AB590243 BT020008 BT020009 CR456765 CU677113 DQ891151 EU176561 TSC_hg19_v1_chr20_-_43589038 AK129538 U58970 BC014907 AK222952 BC001763 BC007423 AK000594 BC006573 AB085681 AK302128 AK307655 NM_006809	-5945	-	TSC_hg19_v1_chr20_+_43538705 NM_001124756 EU190483	-56281	+	TSC_hg19_v1_chr20_+_43514390 AL834170 AB209759	-80629	+	NM_006282 TSC_hg19_v1_chr20_+_43595152 AB209315 BC029511 AK309169 AK225326 BC005231 BC015332 BC038850 CR933633 BC093768	147	+	AK315238 U60207 TSC_hg19_v1_chr20_+_43595176 BC058916 BC039023 U18297	192	+	BC132957 BC132959 BC144234 TSC_hg19_v1_chr20_-_43729732 AK289735 NM_002251	134690	-	BT020008|TOMM34|10953|translocase of outer mitochondrial membrane 34##BT020009|TOMM34|10953|translocase of outer mitochondrial membrane 34##CR456765|TOMM34|10953|translocase of outer mitochondrial membrane 34##DQ891151|TOMM34|10953|translocase of outer mitochondrial membrane 34##EU176561|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK129538|TOMM34|10953|translocase of outer mitochondrial membrane 34##U58970|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC014907|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK222952|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC001763|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC007423|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK000594|TOMM34|10953|translocase of outer mitochondrial membrane 34##BC006573|TOMM34|10953|translocase of outer mitochondrial membrane 34##AB085681|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK302128|TOMM34|10953|translocase of outer mitochondrial membrane 34##AK307655|TOMM34|10953|translocase of outer mitochondrial membrane 34##NM_006809|TOMM34|10953|translocase of outer mitochondrial membrane 34##NM_001124756|PABPC1L|80336|poly(A) binding protein, cytoplasmic 1-like##EU190483|PABPC1L|80336|poly(A) binding protein, cytoplasmic 1-like##AL834170|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AB209759|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##NM_006282|STK4|6789|serine/threonine kinase 4##AB209315|STK4|6789|serine/threonine kinase 4##BC029511|STK4|6789|serine/threonine kinase 4##AK309169|STK4|6789|serine/threonine kinase 4##AK225326|STK4|6789|serine/threonine kinase 4##BC005231|STK4|6789|serine/threonine kinase 4##BC015332|STK4|6789|serine/threonine kinase 4##BC038850|STK4|6789|serine/threonine kinase 4##CR933633|STK4|6789|serine/threonine kinase 4##BC093768|STK4|6789|serine/threonine kinase 4##AK315238|STK4|6789|serine/threonine kinase 4##U60207|STK4|6789|serine/threonine kinase 4##BC058916|STK4|6789|serine/threonine kinase 4##BC039023|STK4|6789|serine/threonine kinase 4##U18297|STK4|6789|serine/threonine kinase 4##BC132957|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC132959|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC144234|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##AK289735|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##NM_002251|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1	0.02945	
chr2	127844729	127844910	reg1028188.p2	4.554	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-431027	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-431112	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-3061955	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	19922	-	BC039307 NM_001001665	118523	-	AK131190 TSC_hg19_v1_chr2_-_127977781	132898	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.410152	CTCF.p2:-36:0.410
chr9	140071135	140071263	reg1029083.p1	4.554	+	DQ355157 BC140911 TSC_hg19_v1_chr9_-_140064504 NM_001013653	-6734	-	TSC_hg19_v1_chr9_-_140063880 EU588721	-7317	-	TSC_hg19_v1_chr9_+_140033607 NM_000832 NM_001185090 NM_001185091 NM_007327 NM_021569 AB208999 D13515 AB208918 L05666 AB590080 L13268	-37421	+	AF191337 DQ890852 DQ894007 BC032503 AK296204 TSC_hg19_v1_chr9_-_140083009	11797	-	TSC_hg19_v1_chr9_-_140083013 AK294601	11816	-	TSC_hg19_v1_chr9_-_140083038 NM_013366	11846	-	DQ355157|LRRC26|389816|leucine rich repeat containing 26##BC140911|LRRC26|389816|leucine rich repeat containing 26##NM_001013653|LRRC26|389816|leucine rich repeat containing 26##NM_000832|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_001185090|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_001185091|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_007327|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##NM_021569|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##AB208999|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##D13515|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##AB208918|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##L05666|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##L13268|GRIN1|2902|glutamate receptor, ionotropic, N-methyl D-aspartate 1##AF191337|ANAPC2|29882|anaphase promoting complex subunit 2##DQ890852|ANAPC2|29882|anaphase promoting complex subunit 2##DQ894007|ANAPC2|29882|anaphase promoting complex subunit 2##BC032503|ANAPC2|29882|anaphase promoting complex subunit 2##AK296204|ANAPC2|29882|anaphase promoting complex subunit 2##AK294601|ANAPC2|29882|anaphase promoting complex subunit 2##NM_013366|ANAPC2|29882|anaphase promoting complex subunit 2	0.0	
chr12	1059328	1059442	reg1005811.p3	4.553	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-559	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-42303	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	-196629	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	41067	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	643966	-	AY009399 NM_030775	666836	+	AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.200873	CTCF.p2:-12:0.201
chr12	111882373	111882553	reg1010421.p1	4.553	+	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	-38714	+	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	-75553	-	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	-75617	-	AK126309 TSC_hg19_v1_chr12_-_111893987	11460	-	TSC_hg19_v1_chr12_-_112036257 AK095017	153812	-	TSC_hg19_v1_chr12_-_112036908 AK307803	154450	-	AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##AK095017|ATXN2|6311|ataxin 2##AK307803|ATXN2|6311|ataxin 2	0.0	
chr2	172290378	172290558	reg1031160.p1	4.553	+	AK090779 NM_001136554	-202645	-	TSC_hg19_v1_chr2_-_172017431 AK091975 NM_012290	-272969	-	TSC_hg19_v1_chr2_-_172017240 DQ890904 DQ894057 BC032657 D50927 AK292508 AF162666 AB004885	-273372	-	TSC_hg19_v1_chr2_-_172290501 AK124092 BC025250 AK024046	58	-	TSC_hg19_v1_chr2_+_172290743 AK307877 NM_001164821 NM_025000	294	+	TSC_hg19_v1_chr2_+_172290824 CR933646	343	+	AK090779|TLK1|9874|tousled-like kinase 1##NM_001136554|TLK1|9874|tousled-like kinase 1##AK091975|TLK1|9874|tousled-like kinase 1##NM_012290|TLK1|9874|tousled-like kinase 1##DQ890904|TLK1|9874|tousled-like kinase 1##DQ894057|TLK1|9874|tousled-like kinase 1##BC032657|TLK1|9874|tousled-like kinase 1##D50927|TLK1|9874|tousled-like kinase 1##AK292508|TLK1|9874|tousled-like kinase 1##AF162666|TLK1|9874|tousled-like kinase 1##AB004885|TLK1|9874|tousled-like kinase 1##AK124092|METTL8|79828|methyltransferase like 8##BC025250|METTL8|79828|methyltransferase like 8##AK024046|METTL8|79828|methyltransferase like 8##AK307877|DCAF17|80067|DDB1 and CUL4 associated factor 17##NM_001164821|DCAF17|80067|DDB1 and CUL4 associated factor 17##NM_025000|DCAF17|80067|DDB1 and CUL4 associated factor 17##CR933646|DCAF17|80067|DDB1 and CUL4 associated factor 17	0.029631	
chr2	20303436	20303551	reg1026593.p1	4.553	+	NM_014713	-51705	-	TSC_hg19_v1_chr2_-_20251415 AY359028 D14696 BC003158 AK129875	-52066	-	CR456758 TSC_hg19_v1_chr2_-_20251382 BC000421 AK304433 BC093075	-52155	-	X60306 AB464260 CU679093 DQ893265 DQ896595 TSC_hg19_v1_chr2_-_20424892 AK299385 J05392 AK313974 AK222739 BC008765 AJ551176 AK311409 NM_002997	121294	-	TSC_hg19_v1_chr2_-_20425168 NM_001006946	121686	-	AF272350 TSC_hg19_v1_chr2_-_20512079	208556	-	NM_014713|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AY359028|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##D14696|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC003158|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK129875|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##CR456758|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC000421|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK304433|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC093075|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##X60306|SDC1|6382|syndecan 1##DQ893265|SDC1|6382|syndecan 1##DQ896595|SDC1|6382|syndecan 1##AK299385|SDC1|6382|syndecan 1##J05392|SDC1|6382|syndecan 1##AK313974|SDC1|6382|syndecan 1##AK222739|SDC1|6382|syndecan 1##BC008765|SDC1|6382|syndecan 1##AJ551176|SDC1|6382|syndecan 1##NM_002997|SDC1|6382|syndecan 1##NM_001006946|SDC1|6382|syndecan 1##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)	0.0	
chr2	204571260	204571379	reg1029779.p1	4.553	+	NM_001243077 NM_001243078 NM_006139 AJ517504 AK313313 J02988 TSC_hg19_v1_chr2_+_204571361 AK303421	-39	+	TSC_hg19_v1_chr2_-_204399987 BC032486 AK096270 AB053311 AJ584699 AY494951 AY523977 AY523978 NM_203365 NM_213589	-171173	-	TSC_hg19_v1_chr2_+_204193004 NM_005759 AK311427 AK302853 AK294429 AK299824 AK316000 BC001439 AB590360 AF260261 BT009920 CU674706 DQ890735 DQ893907	-378184	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	80	+	BC070162 AF414120 NM_001037631 NM_005214 AK313732 BC069566 BC074893 BC074842 AB590653 AF486806 AY209009 AY792514 AY999702 DQ785106 L15006	161268	+	AK314985 AJ277832 NM_012092 BC028006 BC028210 AB023135 AF218312 CU688368 CU688430	230175	+	NM_001243077|CD28|940|CD28 molecule##NM_001243078|CD28|940|CD28 molecule##NM_006139|CD28|940|CD28 molecule##AJ517504|CD28|940|CD28 molecule##AK313313|CD28|940|CD28 molecule##J02988|CD28|940|CD28 molecule##AK303421|CD28|940|CD28 molecule##AK096270|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AB053311|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AJ584699|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY494951|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523977|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523978|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_203365|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_213589|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_005759|ABI2|10152|abl-interactor 2##AK302853|ABI2|10152|abl-interactor 2##AK294429|ABI2|10152|abl-interactor 2##AK299824|ABI2|10152|abl-interactor 2##AK316000|ABI2|10152|abl-interactor 2##BC001439|ABI2|10152|abl-interactor 2##AF260261|ABI2|10152|abl-interactor 2##BT009920|ABI2|10152|abl-interactor 2##DQ890735|ABI2|10152|abl-interactor 2##DQ893907|ABI2|10152|abl-interactor 2##BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule##BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK314985|ICOS|29851|inducible T-cell co-stimulator##AJ277832|ICOS|29851|inducible T-cell co-stimulator##NM_012092|ICOS|29851|inducible T-cell co-stimulator##BC028006|ICOS|29851|inducible T-cell co-stimulator##BC028210|ICOS|29851|inducible T-cell co-stimulator##AB023135|ICOS|29851|inducible T-cell co-stimulator	0.0	
chr2	234111369	234111489	reg1028398.p2	4.553	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-186313	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-186370	+	BC069151 BC107053 NM_005383	-214048	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	48837	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	48894	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	48928	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.0	
chr4	7039264	7039381	reg1025893.p2	4.553	+	NM_001113363 TSC_hg19_v1_chr4_+_6988958	-50369	+	BC042376 TSC_hg19_v1_chr4_-_6988764 BC035129	-50556	-	TSC_hg19_v1_chr4_+_6911552 BC041167	-127756	+	HQ258308 AK075056 TSC_hg19_v1_chr4_-_7044729 BC105055 BC112274 NM_153376	5381	-	TSC_hg19_v1_chr4_+_7045111 BC101334 BC101335 BC101336 BC101337	5794	+	TSC_hg19_v1_chr4_+_7045213 BC047794 NM_152293	5858	+	NM_001113363|TBC1D14|57533|TBC1 domain family, member 14##BC042376|LOC100134937|100134937|uncharacterized LOC100134937##BC035129|LOC100134937|100134937|uncharacterized LOC100134937##BC041167|TBC1D14|57533|TBC1 domain family, member 14##HQ258308|CCDC96|257236|coiled-coil domain containing 96##AK075056|CCDC96|257236|coiled-coil domain containing 96##BC105055|CCDC96|257236|coiled-coil domain containing 96##BC112274|CCDC96|257236|coiled-coil domain containing 96##NM_153376|CCDC96|257236|coiled-coil domain containing 96##BC101334|TADA2B|93624|transcriptional adaptor 2B##BC101335|TADA2B|93624|transcriptional adaptor 2B##BC101336|TADA2B|93624|transcriptional adaptor 2B##BC101337|TADA2B|93624|transcriptional adaptor 2B##BC047794|TADA2B|93624|transcriptional adaptor 2B##NM_152293|TADA2B|93624|transcriptional adaptor 2B	0.0	
chr7	142001916	142002022	reg1029262.p2	4.553	+	AY358487 BC035384 AK122940 NM_001001317	-44108	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-190430	+	AF016833 NM_004668 BC120872	-306277	+	NM_001190487	372161	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	455357	+	M12426 TSC_hg19_v1_chr7_+_142495248	493226	+	AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	0.0	
chr9	33922104	33922239	reg1032743.p1	4.553	+	TSC_hg19_v1_chr9_+_33817704 AJ240087 CR457233	-104499	+	TSC_hg19_v1_chr9_+_33817325 BC047584 AK000426 BC004862 AK225880	-104777	+	TSC_hg19_v1_chr9_+_33817170 NM_017811	-104987	+	AB209911 TSC_hg19_v1_chr9_-_34048886 AK302754 AK294952 AK299183 AK303493 CR933678	126706	-	TSC_hg19_v1_chr9_-_34048895 BC111409 AK302335 NM_018449	126745	-	AK000354 AK292935 TSC_hg19_v1_chr9_-_34126623	204415	-	AJ240087|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##CR457233|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC047584|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK000426|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC004862|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK225880|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AB209911|UBAP2|55833|ubiquitin associated protein 2##AK302754|UBAP2|55833|ubiquitin associated protein 2##AK294952|UBAP2|55833|ubiquitin associated protein 2##AK299183|UBAP2|55833|ubiquitin associated protein 2##AK303493|UBAP2|55833|ubiquitin associated protein 2##CR933678|UBAP2|55833|ubiquitin associated protein 2##BC111409|UBAP2|55833|ubiquitin associated protein 2##AK302335|UBAP2|55833|ubiquitin associated protein 2##NM_018449|UBAP2|55833|ubiquitin associated protein 2##AK000354|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK292935|DCAF12|25853|DDB1 and CUL4 associated factor 12	0.0	
chr9	36190449	36190572	reg1028830.p1	4.553	+	AK313763 NM_005893 AF333334 BC019251 DQ890826 DQ893980 DQ893982 EU176505 Z46967	-21064	+	TSC_hg19_v1_chr9_+_36136731 AK074488 BC017918 AK075091 AK298741 AK307243 CR749781 AY039756 NM_022343	-53778	+	TSC_hg19_v1_chr9_+_36036901 AK292653 NM_021111 AK315073 BC050306 BC032240 BC060806 BC137093 CU687432	-153563	+	NM_001076677 NM_001184760 NM_001184761 NM_001184762 NM_001833 NM_007096 TSC_hg19_v1_chr9_+_36190877	357	+	TSC_hg19_v1_chr9_+_36190919 AK291078	395	+	AK295692 TSC_hg19_v1_chr9_+_36190928 BC009201	421	+	AK313763|CCIN|881|calicin##NM_005893|CCIN|881|calicin##AF333334|CCIN|881|calicin##BC019251|CCIN|881|calicin##DQ890826|CCIN|881|calicin##DQ893980|CCIN|881|calicin##DQ893982|CCIN|881|calicin##EU176505|CCIN|881|calicin##Z46967|CCIN|881|calicin##AK074488|GLIPR2|152007|GLI pathogenesis-related 2##BC017918|GLIPR2|152007|GLI pathogenesis-related 2##AK075091|GLIPR2|152007|GLI pathogenesis-related 2##AK298741|GLIPR2|152007|GLI pathogenesis-related 2##AK307243|GLIPR2|152007|GLI pathogenesis-related 2##CR749781|GLIPR2|152007|GLI pathogenesis-related 2##AY039756|GLIPR2|152007|GLI pathogenesis-related 2##NM_022343|GLIPR2|152007|GLI pathogenesis-related 2##AK292653|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##NM_021111|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##AK315073|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC050306|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC032240|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC060806|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##BC137093|RECK|8434|reversion-inducing-cysteine-rich protein with kazal motifs##NM_001076677|CLTA|1211|clathrin, light chain A##NM_001184760|CLTA|1211|clathrin, light chain A##NM_001184761|CLTA|1211|clathrin, light chain A##NM_001184762|CLTA|1211|clathrin, light chain A##NM_001833|CLTA|1211|clathrin, light chain A##NM_007096|CLTA|1211|clathrin, light chain A##AK291078|CLTA|1211|clathrin, light chain A##AK295692|CLTA|1211|clathrin, light chain A##BC009201|CLTA|1211|clathrin, light chain A	0.16724	
chr10	110389760	110389924	reg1030142.p1	4.552	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-1465466	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-1930783	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-3988797	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	1293367	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	1293435	-	NM_019903 AB209810 BC057285	1375939	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.0	
chr10	116286606	116286687	reg1027271.p1	4.552	+	TSC_hg19_v1_chr10_-_116286631 AK298709 BC002448	-44	-	CU677968 TSC_hg19_v1_chr10_-_116251632	-35039	-	BC024314 NM_001001936 NM_032550	-122132	-	TSC_hg19_v1_chr10_-_116286673 CR749819 NM_006720 AK098277	33	-	AK297344 TSC_hg19_v1_chr10_-_116392101	105454	-	AF005654 NM_002313	131410	-	AK298709|ABLIM1|3983|actin binding LIM protein 1##BC002448|ABLIM1|3983|actin binding LIM protein 1##BC024314|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_001001936|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_032550|AFAP1L2|84632|actin filament associated protein 1-like 2##CR749819|ABLIM1|3983|actin binding LIM protein 1##NM_006720|ABLIM1|3983|actin binding LIM protein 1##AK098277|ABLIM1|3983|actin binding LIM protein 1##AK297344|ABLIM1|3983|actin binding LIM protein 1##AF005654|ABLIM1|3983|actin binding LIM protein 1##NM_002313|ABLIM1|3983|actin binding LIM protein 1	0.0	
chr13	53281720	53281830	reg1028671.p2	4.552	+	NM_001130912 NM_006704 TSC_hg19_v1_chr13_+_53227044 AJ344097 AK292128 AY321358 AK302363 AY271314 BC000911 AK291402 AB528309 AF132856 BT009798 DQ890945 DQ894108	-54833	+	TSC_hg19_v1_chr13_+_53216565 BC108266	-65210	+	TSC_hg19_v1_chr13_+_53191659 NM_001011724 NM_001011725 BC007108 AK123159 BC082242	-90138	+	AB006000 CR541910 TSC_hg19_v1_chr13_-_53313891	32089	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	32187	-	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	141000	-	NM_001130912|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##NM_006704|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AJ344097|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK292128|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY321358|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK302363|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY271314|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC000911|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK291402|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF132856|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BT009798|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ890945|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ894108|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001011724|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001011725|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##AK123159|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##BC082242|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##AB006000|LECT1|11061|leukocyte cell derived chemotaxin 1##CR541910|LECT1|11061|leukocyte cell derived chemotaxin 1##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8	0.592923	CTCF.p2:-7:0.593
chr17	60749964	60750052	reg1008444.p2	4.552	+	TSC_hg19_v1_chr17_+_60705060 BC150212 AF107292 AB384513	-44901	+	BC146647 TSC_hg19_v1_chr17_+_60705048 AF134838	-44963	+	TSC_hg19_v1_chr17_+_60704751 AB014609 BC153884 NM_006039	-45251	+	NM_001100875 BC035021	134003	-	AK122947 AK093076 AX747906 BX648705 NM_152598	135669	-	NM_025185	336889	+	BC150212|MRC2|9902|mannose receptor, C type 2##AF107292|MRC2|9902|mannose receptor, C type 2##BC146647|MRC2|9902|mannose receptor, C type 2##AF134838|MRC2|9902|mannose receptor, C type 2##AB014609|MRC2|9902|mannose receptor, C type 2##BC153884|MRC2|9902|mannose receptor, C type 2##NM_006039|MRC2|9902|mannose receptor, C type 2##NM_001100875|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC035021|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	0.0	
chr2	109471847	109471934	reg1030496.p1	4.552	+	TSC_hg19_v1_chr2_+_109403228 BC050579 AK125199 AK057307 NM_144978 BC015847 BC038421	-68688	+	TSC_hg19_v1_chr2_+_109384621 AY170822	-87207	+	TSC_hg19_v1_chr2_+_109335970 D42063 NM_006267	-135952	+	TSC_hg19_v1_chr2_-_109605623 AK296936	133729	-	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	133857	-	NM_001099289 DQ307286	274173	+	BC050579|CCDC138|165055|coiled-coil domain containing 138##AK125199|CCDC138|165055|coiled-coil domain containing 138##AK057307|CCDC138|165055|coiled-coil domain containing 138##NM_144978|CCDC138|165055|coiled-coil domain containing 138##BC015847|CCDC138|165055|coiled-coil domain containing 138##BC038421|CCDC138|165055|coiled-coil domain containing 138##AY170822|RANBP2|5903|RAN binding protein 2##D42063|RANBP2|5903|RAN binding protein 2##NM_006267|RANBP2|5903|RAN binding protein 2##AK296936|EDAR|10913|ectodysplasin A receptor##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3	0.832416	CTCF.p2:-31:0.832
chr21	38604686	38604867	reg1032198.p1	4.552	+	BC029827 TSC_hg19_v1_chr21_+_38593064	-11717	+	D83077 NM_003316	-149530	+	TSC_hg19_v1_chr21_+_38445570 AK297921 BC092466 NM_001001894 AK291992 AK299991	-159159	+	TSC_hg19_v1_chr21_-_38639617 AK316460 AK299662	34832	-	TSC_hg19_v1_chr21_-_38639642 AJ001867 AK300024 AK312707 D87343 NM_006052 AK303624	35052	-	TSC_hg19_v1_chr21_-_38640233 BX648191 BC110655	35459	-	BC029827|DSCR9|257203|Down syndrome critical region gene 9 (non-protein coding)##D83077|TTC3|7267|tetratricopeptide repeat domain 3##NM_003316|TTC3|7267|tetratricopeptide repeat domain 3##AK297921|TTC3|7267|tetratricopeptide repeat domain 3##BC092466|TTC3|7267|tetratricopeptide repeat domain 3##NM_001001894|TTC3|7267|tetratricopeptide repeat domain 3##AK291992|TTC3|7267|tetratricopeptide repeat domain 3##AK299991|TTC3|7267|tetratricopeptide repeat domain 3##AK316460|DSCR3|10311|Down syndrome critical region gene 3##AK299662|DSCR3|10311|Down syndrome critical region gene 3##AJ001867|DSCR3|10311|Down syndrome critical region gene 3##AK300024|DSCR3|10311|Down syndrome critical region gene 3##AK312707|DSCR3|10311|Down syndrome critical region gene 3##D87343|DSCR3|10311|Down syndrome critical region gene 3##NM_006052|DSCR3|10311|Down syndrome critical region gene 3##AK303624|DSCR3|10311|Down syndrome critical region gene 3##BX648191|DSCR3|10311|Down syndrome critical region gene 3##BC110655|DSCR3|10311|Down syndrome critical region gene 3	0.0	
chr22	33024123	33024282	reg1030217.p1	4.552	+	NM_001033024 TSC_hg19_v1_chr22_+_32871279 AK297841 AK301716	-152922	+	TSC_hg19_v1_chr22_+_32870997 BX648151 BX648220	-153201	+	TSC_hg19_v1_chr22_+_32870950 AK291972 AF233225 AB385082 AM392740 CU013088 CU013376 EU176789 EU176790	-153242	+	NM_000362	172599	+	TSC_hg19_v1_chr22_+_33197690 AK311702 AK314871 AK298126 BC013086 U14394 AX801509 U02571 S78453 U67195	173492	+	BC014277 TSC_hg19_v1_chr22_+_33197759	173550	+	NM_001033024|FBXO7|25793|F-box protein 7##AK297841|FBXO7|25793|F-box protein 7##AK301716|FBXO7|25793|F-box protein 7##BX648151|FBXO7|25793|F-box protein 7##BX648220|FBXO7|25793|F-box protein 7##AK291972|FBXO7|25793|F-box protein 7##AF233225|FBXO7|25793|F-box protein 7##AM392740|FBXO7|25793|F-box protein 7##CU013088|FBXO7|25793|F-box protein 7##CU013376|FBXO7|25793|F-box protein 7##EU176789|FBXO7|25793|F-box protein 7##EU176790|FBXO7|25793|F-box protein 7##NM_000362|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK314871|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AK298126|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC013086|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U14394|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U02571|TIMP3|7078|TIMP metallopeptidase inhibitor 3##S78453|TIMP3|7078|TIMP metallopeptidase inhibitor 3##U67195|TIMP3|7078|TIMP metallopeptidase inhibitor 3##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3	0.0	
chr3	184186279	184186402	reg1034550.p1	4.552	+	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	-88300	+	BC130322 BC136338 BC143982 L33410 NM_000460 NM_001177597 NM_001177598 TSC_hg19_v1_chr3_-_184095936	-90402	-	TSC_hg19_v1_chr3_+_184081196 NM_006232 Z49199 BC000739 AB464044 EU446997	-105111	+	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	93242	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	243423	-	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	343583	+	AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##BC130322|THPO|7066|thrombopoietin##BC136338|THPO|7066|thrombopoietin##BC143982|THPO|7066|thrombopoietin##L33410|THPO|7066|thrombopoietin##NM_000460|THPO|7066|thrombopoietin##NM_001177597|THPO|7066|thrombopoietin##NM_001177598|THPO|7066|thrombopoietin##NM_006232|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##Z49199|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##BC000739|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##EU446997|POLR2H|5437|polymerase (RNA) II (DNA directed) polypeptide H##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3##AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)	0.651066	CTCF.p2:23:0.651
chr5	172330027	172330132	reg1029173.p2	4.552	+	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	-68761	+	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	-131868	-	AF275799 TSC_hg19_v1_chr5_-_172083715	-246436	-	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	56369	+	NM_003945 TSC_hg19_v1_chr5_+_172410801 BC119715 BC119714 AK312068 Y15286	80703	+	TSC_hg19_v1_chr5_+_172410833 CR456856 CR542131	80765	+	NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1##NM_003945|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119715|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119714|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##AK312068|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##Y15286|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR456856|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR542131|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1	0.434308	CTCF.p2:0:0.434
chr12	9075274	9075366	reg1026784.p1	4.551	+	TSC_hg19_v1_chr12_+_9067153 AB209063 AK293893 NM_004426 BC073964 U89277 BC157850	-8051	+	NM_144670 AK122624 AK290355 AL832139 BX648231	-100138	+	TSC_hg19_v1_chr12_+_8850570 AK302847 NM_020734 BC006368	-224716	+	TSC_hg19_v1_chr12_-_9102242 AK291143 M16985 AK222792 BC024206 AK312689	26898	-	TSC_hg19_v1_chr12_-_9102262 NM_001207024 NM_002355	26989	-	AK316337 BC012621 AK301367 AF081675 AF097358 NM_005810 AF034952 DQ892820 DQ896066	66863	+	AB209063|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##AK293893|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##NM_004426|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC073964|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##U89277|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC157850|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##NM_144670|A2ML1|144568|alpha-2-macroglobulin-like 1##AK122624|A2ML1|144568|alpha-2-macroglobulin-like 1##AK290355|A2ML1|144568|alpha-2-macroglobulin-like 1##AL832139|A2ML1|144568|alpha-2-macroglobulin-like 1##BX648231|A2ML1|144568|alpha-2-macroglobulin-like 1##AK302847|RIMKLB|57494|ribosomal modification protein rimK-like family member B##NM_020734|RIMKLB|57494|ribosomal modification protein rimK-like family member B##BC006368|RIMKLB|57494|ribosomal modification protein rimK-like family member B##AK291143|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##M16985|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK222792|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##BC024206|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK312689|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##NM_001207024|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##NM_002355|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1	0.401131	CTCF.p2:15:0.401
chr12	96792828	96793008	reg1027282.p1	4.551	+	TSC_hg19_v1_chr12_+_96588254 BC017371	-204651	+	TSC_hg19_v1_chr12_+_96588154 NM_005230 Z36715 AK312694	-204792	+	AK301308 TSC_hg19_v1_chr12_-_96429399 AK310522 AK293630	-363503	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	1065	-	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	1399	-	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	508113	+	BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##NM_005230|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##Z36715|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK312694|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK301308|LTA4H|4048|leukotriene A4 hydrolase##AK293630|LTA4H|4048|leukotriene A4 hydrolase##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1	0.0	
chr13	102849646	102849811	reg1032727.p2	4.551	+	NM_004115 U66200	-280734	-	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	-744733	+	TSC_hg19_v1_chr13_-_102068838 BC028390	-780888	-	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	204347	-	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	399608	+	HQ258371 NM_001010977 BC132748 BC132750	497130	-	NM_004115|FGF14|2259|fibroblast growth factor 14##U66200|FGF14|2259|fibroblast growth factor 14##AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC028390|NALCN|259232|sodium leak channel, non-selective##BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II##HQ258371|METTL21C|196541|methyltransferase like 21C##NM_001010977|METTL21C|196541|methyltransferase like 21C##BC132748|METTL21C|196541|methyltransferase like 21C##BC132750|METTL21C|196541|methyltransferase like 21C	0.0	
chr16	80837247	80837377	reg1025019.p1	4.551	+	AF125108 NM_130897 BC054892 BC035232	-262424	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-1202697	-	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-2703857	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	735	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	202772	+	TSC_hg19_v1_chr16_+_81040132 BC007334	202831	+	AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N##BC007334|CENPN|55839|centromere protein N	0.014136	
chr2	136467391	136467571	reg1003855.p1	4.551	+	TSC_hg19_v1_chr2_+_136289050 BC001217 D21852 BC041093 NM_015361	-178421	+	AK095362 BC089429 NM_032143	-178695	-	NM_001172435 NM_012233 TSC_hg19_v1_chr2_+_135809861 AK022494 BC146809 BC071602 D31886 AB385272 AB449877 BC030992	-657565	+	TSC_hg19_v1_chr2_+_136499328 NM_014607 AK311058	31756	+	TSC_hg19_v1_chr2_+_136499437 BC035594 EF199840 BX647662 AK304096 D87684 BC020806	31916	+	TSC_hg19_v1_chr2_+_136499492 AK292829 AB527369 AM392761 AM393478 CU690126 DQ891123 DQ894302	32012	+	BC001217|R3HDM1|23518|R3H domain containing 1##D21852|R3HDM1|23518|R3H domain containing 1##BC041093|R3HDM1|23518|R3H domain containing 1##NM_015361|R3HDM1|23518|R3H domain containing 1##AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##NM_001172435|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##NM_012233|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AK022494|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC146809|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC071602|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##D31886|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AB449877|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC030992|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##NM_014607|UBXN4|23190|UBX domain protein 4##AK311058|UBXN4|23190|UBX domain protein 4##BC035594|UBXN4|23190|UBX domain protein 4##EF199840|UBXN4|23190|UBX domain protein 4##BX647662|UBXN4|23190|UBX domain protein 4##AK304096|UBXN4|23190|UBX domain protein 4##D87684|UBXN4|23190|UBX domain protein 4##BC020806|UBXN4|23190|UBX domain protein 4##AK292829|UBXN4|23190|UBX domain protein 4##AM392761|UBXN4|23190|UBX domain protein 4##AM393478|UBXN4|23190|UBX domain protein 4##DQ891123|UBXN4|23190|UBX domain protein 4##DQ894302|UBXN4|23190|UBX domain protein 4	0.0	
chr6	114429707	114429815	reg1026914.p1	4.551	+	AF503292 NM_153612 BC093911 BC093913	-45737	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-137425	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	-137489	-	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	1952121	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	1992248	+	AK097758 TSC_hg19_v1_chr6_-_116422450	1992669	-	AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	0.86948	CTCF.p2:-19:0.869
chr1	235062642	235062788	reg1027179.p2	4.550	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-166941	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-317469	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-318857	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	229374	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	229516	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	261848	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr14	68962445	68962626	reg1032044.p1	4.550	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-676015	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-679236	-	AK315462 NM_152443	-793933	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	297185	-	NM_001244698 NM_004926	298095	-	NM_001244701 AB528867	300449	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr15	63771906	63772069	reg1026817.p1	4.550	+	AK315769 NM_001218 NM_206925 TSC_hg19_v1_chr15_-_63674076	-97912	-	BT006656 DQ893188 DQ896511 EU831616 EU831623 EU831703 EU831708 AF051882 BC000278 AF037335 BC011691 TSC_hg19_v1_chr15_-_63674046 AK096845 BC023981	-97995	-	NM_001145646 NM_031301 TSC_hg19_v1_chr15_+_63569803 AK291204 AL136671 BC020905 AB189172 AB197122 AF508794 AX776001 AY358698 AB528062 AM392724 AM392878 DQ891401 CU676772 AK307725	-202174	+	TSC_hg19_v1_chr15_+_63796791 AK314223	24795	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	24890	+	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	117592	+	AK315769|CA12|771|carbonic anhydrase XII##NM_001218|CA12|771|carbonic anhydrase XII##NM_206925|CA12|771|carbonic anhydrase XII##BT006656|CA12|771|carbonic anhydrase XII##DQ893188|CA12|771|carbonic anhydrase XII##DQ896511|CA12|771|carbonic anhydrase XII##EU831616|CA12|771|carbonic anhydrase XII##EU831623|CA12|771|carbonic anhydrase XII##EU831703|CA12|771|carbonic anhydrase XII##EU831708|CA12|771|carbonic anhydrase XII##AF051882|CA12|771|carbonic anhydrase XII##BC000278|CA12|771|carbonic anhydrase XII##AF037335|CA12|771|carbonic anhydrase XII##BC011691|CA12|771|carbonic anhydrase XII##AK096845|CA12|771|carbonic anhydrase XII##BC023981|CA12|771|carbonic anhydrase XII##NM_001145646|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##NM_031301|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK291204|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AL136671|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##BC020905|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB189172|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB197122|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AF508794|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AY358698|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392724|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392878|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##DQ891401|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK307725|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK314223|USP3|9960|ubiquitin specific peptidase 3##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22	0.104899	
chr2	132430567	132430668	reg1005608.p2	4.550	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-145111	+	AK304811 TSC_hg19_v1_chr2_+_132250648 AK293811 AK300337 AK303293 AK308371 BC093080	-180032	+	TSC_hg19_v1_chr2_-_132250072 NM_001085365	-180556	-	AF038169 NM_013310	49446	+	BC043584 NM_214461	128616	-	AK122643 NM_001508	743529	+	BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK304811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK293811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK300337|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK303293|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK308371|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC093080|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39	0.0	
chr2	60711572	60711748	reg1032248.p2	4.550	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2243178	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-2437672	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-2437906	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	68862	-	AF080216 TSC_hg19_v1_chr2_-_60780784	69118	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	271824	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.0	
chr4	72575772	72575928	reg1029212.p1	4.550	+	BC030977 NM_003759 AF007216 AK308038 CU689062	-370983	+	AF069510 AB470072 AF053753 AF053754 AF310248 EF531618 TSC_hg19_v1_chr4_+_72102322	-473564	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	-523127	+	AB591002 CU691194 M12654 TSC_hg19_v1_chr4_-_72649797 AK290827 AK298433 AK312971 BC057228 BC022310 X03178 AK315853 NM_000583	74056	-	AK309595 NM_001204307	93907	-	AK223458 NM_001204306	95386	-	BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK290827|GC|2638|group-specific component (vitamin D binding protein)##AK298433|GC|2638|group-specific component (vitamin D binding protein)##AK312971|GC|2638|group-specific component (vitamin D binding protein)##BC057228|GC|2638|group-specific component (vitamin D binding protein)##BC022310|GC|2638|group-specific component (vitamin D binding protein)##X03178|GC|2638|group-specific component (vitamin D binding protein)##AK315853|GC|2638|group-specific component (vitamin D binding protein)##NM_000583|GC|2638|group-specific component (vitamin D binding protein)##AK309595|GC|2638|group-specific component (vitamin D binding protein)##NM_001204307|GC|2638|group-specific component (vitamin D binding protein)##AK223458|GC|2638|group-specific component (vitamin D binding protein)##NM_001204306|GC|2638|group-specific component (vitamin D binding protein)	0.051897	
chr6	87416290	87416440	reg1033657.p1	4.550	+	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	-1027928	-	TSC_hg19_v1_chr6_-_86353055 AF037448 NM_001159677 NM_006372	-1063340	-	TSC_hg19_v1_chr6_-_86352716 AF155568	-1063650	-	NM_000865	230658	+	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	388453	-	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	448924	+	BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##AF037448|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159677|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_006372|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AF155568|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292	0.997347	CTCF.p2:0:0.997
chr8	143376956	143377060	reg1028816.p1	4.550	+	BC144560 AK125848 AK131461 NM_207414	-859691	-	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	-944947	+	TSC_hg19_v1_chr8_+_142402120 AK311257	-974874	+	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	107529	-	AB005297 NM_001702	168368	+	AF193421 D87468 BC075802 BC012321 NM_015193 TSC_hg19_v1_chr8_-_143695839	318818	-	BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1##AF193421|ARC|23237|activity-regulated cytoskeleton-associated protein##D87468|ARC|23237|activity-regulated cytoskeleton-associated protein##BC075802|ARC|23237|activity-regulated cytoskeleton-associated protein##BC012321|ARC|23237|activity-regulated cytoskeleton-associated protein##NM_015193|ARC|23237|activity-regulated cytoskeleton-associated protein	0.185685	
chrX	68353894	68353994	reg1033099.p2	4.550	+	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	-305089	+	TSC_hg19_v1_chrX_+_67913490 D80011	-440453	+	TSC_hg19_v1_chrX_+_67913480 AK291747 NM_001142504	-440464	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	31362	-	AF087142 NM_015686 BC136518 BC136519	371139	+	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	481991	+	BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK291747|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142504|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B##AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A	0.181214	
chr11	67273005	67273185	reg1000241.p1	4.549	+	TSC_hg19_v1_chr11_-_67272835 AF334584 BC022230 NM_001130848 NM_004910	-262	-	X98654 TSC_hg19_v1_chr11_-_67271900	-1221	-	TSC_hg19_v1_chr11_+_67250595 BC104797 BC104827 U31913 AB529203 EU446613	-22483	+	TSC_hg19_v1_chr11_-_67275634 BT006909 CR457050 CR542042 AK310197 AK001498 BC016704 AF089814	2538	-	BC002850 NM_005851 AK308725 TSC_hg19_v1_chr11_-_67276169	3044	-	AB528802 AF169154 BC018476 NM_016366	17753	-	AF334584|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##BC022230|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##NM_001130848|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##NM_004910|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##X98654|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##BC104797|AIP|9049|aryl hydrocarbon receptor interacting protein##BC104827|AIP|9049|aryl hydrocarbon receptor interacting protein##U31913|AIP|9049|aryl hydrocarbon receptor interacting protein##EU446613|AIP|9049|aryl hydrocarbon receptor interacting protein##BT006909|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR457050|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR542042|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK310197|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK001498|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BC016704|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AF089814|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BC002850|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##NM_005851|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AF169154|CABP2|51475|calcium binding protein 2##BC018476|CABP2|51475|calcium binding protein 2##NM_016366|CABP2|51475|calcium binding protein 2	0.0	
chr1	49038572	49038752	reg1006133.p2	4.549	+	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	-100817	-	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	-100984	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	-350270	+	BC011804 AK021650 CU675869 NM_024603 BC007932	203835	-	TSC_hg19_v1_chr1_-_50489560 BC035739 AK094826 AK294394	1450885	-	TSC_hg19_v1_chr1_-_50489627 AK294633 AK296221 NM_032785	1450985	-	AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC011804|BEND5|79656|BEN domain containing 5##AK021650|BEND5|79656|BEN domain containing 5##NM_024603|BEND5|79656|BEN domain containing 5##BC007932|BEND5|79656|BEN domain containing 5##BC035739|AGBL4|84871|ATP/GTP binding protein-like 4##AK094826|AGBL4|84871|ATP/GTP binding protein-like 4##AK294394|AGBL4|84871|ATP/GTP binding protein-like 4##AK294633|AGBL4|84871|ATP/GTP binding protein-like 4##AK296221|AGBL4|84871|ATP/GTP binding protein-like 4##NM_032785|AGBL4|84871|ATP/GTP binding protein-like 4	0.0	
chr22	30998207	30998320	reg1030429.p1	4.549	+	TSC_hg19_v1_chr22_-_30987884 BC032489 U78310 AK315518 NM_001243225 NM_014303	-10367	-	AB385086 AB451380 CU013139 CU013427 CU689394 TSC_hg19_v1_chr22_-_30987858 CR456539	-10422	-	D88667 NM_004861	-37388	-	NM_000355 NM_001184726 TSC_hg19_v1_chr22_+_31003162 AK313711 BC011239 BC001176 L02647 L02648 AK225445 CR456591 M60396 AB528246 CU013191 CU013479 DQ892811 DQ896057 CU679894	4930	+	TSC_hg19_v1_chr22_+_31031763 NM_001001479 BC040191	33473	+	AF533017 TSC_hg19_v1_chr22_-_31063662	65375	-	BC032489|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##U78310|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##AK315518|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##NM_001243225|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##NM_014303|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##AB451380|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##CU013139|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##CU013427|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##CR456539|PES1|23481|pescadillo homolog 1, containing BRCT domain (zebrafish)##D88667|GAL3ST1|9514|galactose-3-O-sulfotransferase 1##NM_004861|GAL3ST1|9514|galactose-3-O-sulfotransferase 1##NM_000355|TCN2|6948|transcobalamin II##NM_001184726|TCN2|6948|transcobalamin II##AK313711|TCN2|6948|transcobalamin II##BC011239|TCN2|6948|transcobalamin II##BC001176|TCN2|6948|transcobalamin II##L02647|TCN2|6948|transcobalamin II##L02648|TCN2|6948|transcobalamin II##AK225445|TCN2|6948|transcobalamin II##CR456591|TCN2|6948|transcobalamin II##M60396|TCN2|6948|transcobalamin II##CU013191|TCN2|6948|transcobalamin II##CU013479|TCN2|6948|transcobalamin II##DQ892811|TCN2|6948|transcobalamin II##DQ896057|TCN2|6948|transcobalamin II##NM_001001479|SLC35E4|339665|solute carrier family 35, member E4##BC040191|SLC35E4|339665|solute carrier family 35, member E4##AF533017|DUSP18|150290|dual specificity phosphatase 18	0.968215	CTCF.p2:10:0.968
chr4	100326631	100326767	reg1005399.p1	4.549	+	CU688112 BC074786 BC066227 BC066228 BC067419 BC067420 BC067421 BC067422 BC074771 BC062476 M12272 X04299 TSC_hg19_v1_chr4_-_100273904 NM_000669	-52826	-	BT019812 D00137 M24317 M21692 AK304396 BX647469 AF153821 AK299409 AK316501 X03350 AK301018 AK303945 AK311712 BC033009 TSC_hg19_v1_chr4_-_100242559 NM_000668	-84170	-	M12271 BC074738 BC117442 BC126306 AK290558 M12963 AK309597 NM_000667	-114565	-	AK301696 NM_001166504	29591	-	X76342 AK223472 BC131512 U07821 AK301657 AK310811 AK312854 NM_000673	29858	-	NM_032149 AK093085 AX747911 AK223345 AK314711 AL136838	105480	+	BC074786|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC066227|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC066228|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067419|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067420|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067421|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC067422|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC074771|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BC062476|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##M12272|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##X04299|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##NM_000669|ADH1C|126|alcohol dehydrogenase 1C (class I), gamma polypeptide##BT019812|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##D00137|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##M24317|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##M21692|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK304396|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##BX647469|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AF153821|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK299409|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK316501|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##X03350|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK301018|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##AK303945|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##BC033009|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##NM_000668|ADH1B|125|alcohol dehydrogenase 1B (class I), beta polypeptide##M12271|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##BC074738|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##BC117442|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##BC126306|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##AK290558|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##M12963|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##AK309597|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##NM_000667|ADH1A|124|alcohol dehydrogenase 1A (class I), alpha polypeptide##AK301696|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_001166504|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##X76342|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK223472|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##BC131512|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##U07821|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK301657|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK310811|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##AK312854|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_000673|ADH7|131|alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide##NM_032149|C4orf17|84103|chromosome 4 open reading frame 17##AK093085|C4orf17|84103|chromosome 4 open reading frame 17##AK223345|C4orf17|84103|chromosome 4 open reading frame 17##AK314711|C4orf17|84103|chromosome 4 open reading frame 17##AL136838|C4orf17|84103|chromosome 4 open reading frame 17	0.0	
chr4	4680061	4680242	reg1030329.p1	4.549	+	TSC_hg19_v1_chr4_+_4543925 BC025734	-136267	+	TSC_hg19_v1_chr4_-_4543750 NM_016930	-136390	-	TSC_hg19_v1_chr4_-_4543741 AK310026	-136420	-	TSC_hg19_v1_chr4_+_4861391 NM_002448 AK290636 M97676 BC021285	181247	+	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	340995	-	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	373129	+	BC025734|LOC100507266|100507266|uncharacterized LOC100507266##NM_016930|STX18|53407|syntaxin 18##AK310026|STX18|53407|syntaxin 18##NM_002448|MSX1|4487|msh homeobox 1##AK290636|MSX1|4487|msh homeobox 1##M97676|MSX1|4487|msh homeobox 1##BC021285|MSX1|4487|msh homeobox 1##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B	0.714535	CTCF.p2:-1:0.715
chr5	74880623	74880750	reg1033529.p2	4.549	+	NM_001130105	-72881	-	AF163570 NM_016218 TSC_hg19_v1_chr5_+_74807715 AK091659 AK314610 AK026316 AF194973 AF315601 AF318313	-72950	+	TSC_hg19_v1_chr5_-_74807448 AK091851 AK292087 AX747221 NM_005713 NM_031361	-73217	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	127576	-	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	132574	-	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	498585	+	NM_001130105|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AF163570|POLK|51426|polymerase (DNA directed) kappa##NM_016218|POLK|51426|polymerase (DNA directed) kappa##AK091659|POLK|51426|polymerase (DNA directed) kappa##AK314610|POLK|51426|polymerase (DNA directed) kappa##AK026316|POLK|51426|polymerase (DNA directed) kappa##AF194973|POLK|51426|polymerase (DNA directed) kappa##AF318313|POLK|51426|polymerase (DNA directed) kappa##AK091851|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AK292087|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##NM_005713|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##NM_031361|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C	0.821813	CTCF.p2:-24:0.822
chr6_qbl_hap6	1858149	1858255	reg1030212.p1	4.549	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.147186	
chrX	109686020	109686122	reg1024574.p1	4.549	+	AK091430 NM_001171689	-2613	-	AB037739 AY121804 NM_020769	-23787	+	TSC_hg19_v1_chrX_-_109561428 AJ007014	-124625	-	BC002909 AK293106 AK297563 AK312270 NM_145234	352962	-	NM_001143981 NM_001143982 NM_001143983	353214	-	AK290504 NM_001128166 NM_001128167 TSC_hg19_v1_chrX_+_110187624 AK315284	501476	+	AK091430|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001171689|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AB037739|RGAG1|57529|retrotransposon gag domain containing 1##AY121804|RGAG1|57529|retrotransposon gag domain containing 1##NM_020769|RGAG1|57529|retrotransposon gag domain containing 1##AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC002909|CHRDL1|91851|chordin-like 1##AK293106|CHRDL1|91851|chordin-like 1##AK297563|CHRDL1|91851|chordin-like 1##AK312270|CHRDL1|91851|chordin-like 1##NM_145234|CHRDL1|91851|chordin-like 1##NM_001143981|CHRDL1|91851|chordin-like 1##NM_001143982|CHRDL1|91851|chordin-like 1##NM_001143983|CHRDL1|91851|chordin-like 1##AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	0.138348	
chr1	235114204	235114349	reg1028219.p1	4.548	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-218502	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-369030	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-370418	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	177813	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	177955	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	210287	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.019575	
chr1	246613961	246614141	reg1006275.p1	4.548	+	AK024733 NM_022743	-33340	-	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-1295743	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-1480368	+	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	56503	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	56557	-	TSC_hg19_v1_chr1_-_246670632 NM_001167740	56586	-	AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3##NM_001167740|SMYD3|64754|SET and MYND domain containing 3	0.0	
chr12	55117571	55117665	reg1029987.p1	4.548	+	AY590150 AF144011 BC062682 BC069108 NM_053283 EF503687 EF503688 EF503689	-75413	-	CU686745 CU687522 AF238867 BC069317 NM_033277 BC062217	-88967	-	CR457003 AY063766 U48707 TSC_hg19_v1_chr12_-_54982398 BC022470 NM_006741 AK123969	-135254	-	NM_058173 AF414087 AY359062 BC111421 AY651259	130714	+	BC132732 BC132734 NM_001098815	258003	-	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	260884	-	AY590150|DCD|117159|dermcidin##AF144011|DCD|117159|dermcidin##BC062682|DCD|117159|dermcidin##BC069108|DCD|117159|dermcidin##NM_053283|DCD|117159|dermcidin##EF503687|DCD|117159|dermcidin##EF503688|DCD|117159|dermcidin##EF503689|DCD|117159|dermcidin##AF238867|LACRT|90070|lacritin##BC069317|LACRT|90070|lacritin##NM_033277|LACRT|90070|lacritin##BC062217|LACRT|90070|lacritin##CR457003|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AY063766|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##U48707|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##BC022470|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_006741|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AK123969|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748	0.965662	CTCF.p2:-1:0.966
chr14	93241798	93241949	reg1030636.p1	4.548	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	-26914	-	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	-123050	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	-123237	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	18813	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	147571	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	147724	+	Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)	0.0	
chr20	22664536	22664716	reg1001488.p1	4.548	+	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	-98524	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	-99551	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	-99710	-	TSC_hg19_v1_chr20_+_23015949 BC117270 BC117272 NM_001052 BC069063	351408	+	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	365612	-	TSC_hg19_v1_chr20_-_23062805 AK056764	398186	-	AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##BC117270|SSTR4|6754|somatostatin receptor 4##BC117272|SSTR4|6754|somatostatin receptor 4##NM_001052|SSTR4|6754|somatostatin receptor 4##BC069063|SSTR4|6754|somatostatin receptor 4##BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##AK056764|CD93|22918|CD93 molecule	0.0	
chr6	110940208	110940357	reg1026185.p2	4.548	+	TSC_hg19_v1_chr6_-_110797837 BC047565 NM_033125	-142419	-	TSC_hg19_v1_chr6_-_110797817 AK304546	-142464	-	BC012014 AF268892 AY145502 BC037247 TSC_hg19_v1_chr6_-_110797794	-142494	-	AK304351 TSC_hg19_v1_chr6_+_111135843	195551	+	BC047513 TSC_hg19_v1_chr6_-_111136246	195936	-	AJ420571 TSC_hg19_v1_chr6_-_111136300	196017	-	BC047565|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##NM_033125|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304546|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC012014|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AF268892|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AY145502|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC037247|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304351|AMD1|262|adenosylmethionine decarboxylase 1##BC047513|CDK19|23097|cyclin-dependent kinase 19##AJ420571|CDK19|23097|cyclin-dependent kinase 19	0.0	
chr8	104809035	104809142	reg1032123.p1	4.548	+	AK126939 NM_001100117	-296113	+	TSC_hg19_v1_chr8_+_104427659 AK001874	-381423	+	TSC_hg19_v1_chr8_+_104427646 AK001693	-381442	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	22487	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	542964	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	670127	-	AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK001874|DCAF13|25879|DDB1 and CUL4 associated factor 13##AK001693|DCAF13|25879|DDB1 and CUL4 associated factor 13##NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase	0.780101	CTCF.p2:4:0.780
chr8	11365874	11365988	reg1023903.p2	4.548	+	S76617 NM_001715 BC018703 BC004473 BC038555	-14338	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-41702	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-160927	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	195789	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	261337	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	294253	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.472115	CTCF.p2:-10:0.472
chr9	132651084	132651181	reg1031304.p2	4.548	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-53367	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-53410	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-53448	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	154222	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	154356	-	BC039728 NM_001136557 NM_001136558 NM_020960	164852	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr1	103016480	103016600	reg1029955.p2	4.547	+	NM_058170 TSC_hg19_v1_chr1_-_102462791	-553750	-	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	-554053	-	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-1313970	+	AB208844 TSC_hg19_v1_chr1_-_103496798	480243	-	J04177 TSC_hg19_v1_chr1_-_103574032 BC117697	557431	-	NM_001190709 NM_001854 NM_080629 NM_080630 TSC_hg19_v1_chr1_-_103574051	557511	-	NM_058170|OLFM3|118427|olfactomedin 3##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##AB208844|COL11A1|1301|collagen, type XI, alpha 1##J04177|COL11A1|1301|collagen, type XI, alpha 1##BC117697|COL11A1|1301|collagen, type XI, alpha 1##NM_001190709|COL11A1|1301|collagen, type XI, alpha 1##NM_001854|COL11A1|1301|collagen, type XI, alpha 1##NM_080629|COL11A1|1301|collagen, type XI, alpha 1##NM_080630|COL11A1|1301|collagen, type XI, alpha 1	0.993721	CTCF.p2:2:0.994
chr19	11662873	11663053	reg1031768.p1	4.547	+	BC022015 NM_001299 AK316406 BC036307 D17408 U37019 TSC_hg19_v1_chr19_+_11649667 AK223234 AK301888 AK313255 S80560 CU692454	-13304	+	BC005119 BC000193 AK131241 TSC_hg19_v1_chr19_-_11639952 BC008279 NM_001142464 NM_001142465 NM_016581	-23006	-	AK314905 NM_001243204	-23284	-	TSC_hg19_v1_chr19_-_11670046 AK097850 NM_032377	7070	-	X14618 TSC_hg19_v1_chr19_-_11688461	25488	-	TSC_hg19_v1_chr19_-_11688497 BC025414 J04430	25527	-	BC022015|CNN1|1264|calponin 1, basic, smooth muscle##NM_001299|CNN1|1264|calponin 1, basic, smooth muscle##AK316406|CNN1|1264|calponin 1, basic, smooth muscle##BC036307|CNN1|1264|calponin 1, basic, smooth muscle##D17408|CNN1|1264|calponin 1, basic, smooth muscle##U37019|CNN1|1264|calponin 1, basic, smooth muscle##AK223234|CNN1|1264|calponin 1, basic, smooth muscle##AK301888|CNN1|1264|calponin 1, basic, smooth muscle##AK313255|CNN1|1264|calponin 1, basic, smooth muscle##S80560|CNN1|1264|calponin 1, basic, smooth muscle##BC005119|ECSIT|51295|ECSIT homolog (Drosophila)##BC000193|ECSIT|51295|ECSIT homolog (Drosophila)##BC008279|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001142464|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001142465|ECSIT|51295|ECSIT homolog (Drosophila)##NM_016581|ECSIT|51295|ECSIT homolog (Drosophila)##AK314905|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001243204|ECSIT|51295|ECSIT homolog (Drosophila)##AK097850|ELOF1|84337|elongation factor 1 homolog (S. cerevisiae)##NM_032377|ELOF1|84337|elongation factor 1 homolog (S. cerevisiae)##X14618|ACP5|54|acid phosphatase 5, tartrate resistant##BC025414|ACP5|54|acid phosphatase 5, tartrate resistant##J04430|ACP5|54|acid phosphatase 5, tartrate resistant	0.078354	
chr19	11679092	11679222	reg1029789.p2	4.547	+	TSC_hg19_v1_chr19_-_11670046 AK097850 NM_032377	-9124	-	BC022015 NM_001299 AK316406 BC036307 D17408 U37019 TSC_hg19_v1_chr19_+_11649667 AK223234 AK301888 AK313255 S80560 CU692454	-29498	+	BC005119 BC000193 AK131241 TSC_hg19_v1_chr19_-_11639952 BC008279 NM_001142464 NM_001142465 NM_016581	-39200	-	X14618 TSC_hg19_v1_chr19_-_11688461	9294	-	TSC_hg19_v1_chr19_-_11688497 BC025414 J04430	9333	-	TSC_hg19_v1_chr19_-_11688516 AK290717 NM_001611	9373	-	AK097850|ELOF1|84337|elongation factor 1 homolog (S. cerevisiae)##NM_032377|ELOF1|84337|elongation factor 1 homolog (S. cerevisiae)##BC022015|CNN1|1264|calponin 1, basic, smooth muscle##NM_001299|CNN1|1264|calponin 1, basic, smooth muscle##AK316406|CNN1|1264|calponin 1, basic, smooth muscle##BC036307|CNN1|1264|calponin 1, basic, smooth muscle##D17408|CNN1|1264|calponin 1, basic, smooth muscle##U37019|CNN1|1264|calponin 1, basic, smooth muscle##AK223234|CNN1|1264|calponin 1, basic, smooth muscle##AK301888|CNN1|1264|calponin 1, basic, smooth muscle##AK313255|CNN1|1264|calponin 1, basic, smooth muscle##S80560|CNN1|1264|calponin 1, basic, smooth muscle##BC005119|ECSIT|51295|ECSIT homolog (Drosophila)##BC000193|ECSIT|51295|ECSIT homolog (Drosophila)##BC008279|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001142464|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001142465|ECSIT|51295|ECSIT homolog (Drosophila)##NM_016581|ECSIT|51295|ECSIT homolog (Drosophila)##X14618|ACP5|54|acid phosphatase 5, tartrate resistant##BC025414|ACP5|54|acid phosphatase 5, tartrate resistant##J04430|ACP5|54|acid phosphatase 5, tartrate resistant##AK290717|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001611|ACP5|54|acid phosphatase 5, tartrate resistant	0.0	
chr2	106505231	106505329	reg1029387.p1	4.547	+	NM_001004720 BC000103	-37019	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	-72305	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	-143737	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	176884	+	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	305465	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	305478	-	NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1	0.024584	
chr3	72359819	72360000	reg1027337.p2	4.547	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-525638	-	AK313656 NM_173359	-555986	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-556387	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	537639	-	BC017274 TSC_hg19_v1_chr3_-_72897575	537666	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	537683	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr4	148966269	148966376	reg1029094.p1	4.547	+	AB050785 BC128055 NM_024605 BC126899 BC109029 BC109030	-312865	+	TSC_hg19_v1_chr4_+_148653238 AK123785	-313071	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	-361058	-	TSC_hg19_v1_chr4_-_149357955 AB587357	391660	-	TSC_hg19_v1_chr4_-_149363305 BC111758	397017	-	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	397262	-	AB050785|ARHGAP10|79658|Rho GTPase activating protein 10##BC128055|ARHGAP10|79658|Rho GTPase activating protein 10##NM_024605|ARHGAP10|79658|Rho GTPase activating protein 10##BC126899|ARHGAP10|79658|Rho GTPase activating protein 10##BC109029|ARHGAP10|79658|Rho GTPase activating protein 10##BC109030|ARHGAP10|79658|Rho GTPase activating protein 10##AK123785|ARHGAP10|79658|Rho GTPase activating protein 10##BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	0.044393	
chr12	51058417	51058549	reg1026650.p1	4.546	+	TSC_hg19_v1_chr12_+_50898778 BC075027	-159584	+	TSC_hg19_v1_chr12_+_50898767 AK091597 AX747083 NM_173602	-159728	+	TSC_hg19_v1_chr12_+_50869532 AF131755	-188896	+	TSC_hg19_v1_chr12_+_51157883 NM_005171 AK313406 BC029619	99395	+	TSC_hg19_v1_chr12_+_51158275 AK299240	99775	+	NM_182559 BC035123 BC048112 CU690554	178240	+	BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##AK091597|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##NM_173602|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_005171|ATF1|466|activating transcription factor 1##AK313406|ATF1|466|activating transcription factor 1##BC029619|ATF1|466|activating transcription factor 1##AK299240|ATF1|466|activating transcription factor 1##NM_182559|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC035123|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC048112|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12	0.076742	
chr1	40829464	40829602	reg1030551.p1	4.546	+	TSC_hg19_v1_chr1_-_40783378 BC065715	-46105	-	TSC_hg19_v1_chr1_-_40782992 BC041479	-46513	-	TSC_hg19_v1_chr1_-_40782958 BC136326 BC136327 NM_001852	-46590	-	TSC_hg19_v1_chr1_+_40839382 NM_022733	9842	+	TSC_hg19_v1_chr1_+_40839438 AK313105	9906	+	NM_001198978 AK303975 AL133206	10793	+	BC065715|COL9A2|1298|collagen, type IX, alpha 2##BC041479|COL9A2|1298|collagen, type IX, alpha 2##BC136326|COL9A2|1298|collagen, type IX, alpha 2##BC136327|COL9A2|1298|collagen, type IX, alpha 2##NM_001852|COL9A2|1298|collagen, type IX, alpha 2##NM_022733|SMAP2|64744|small ArfGAP2##AK313105|SMAP2|64744|small ArfGAP2##NM_001198978|SMAP2|64744|small ArfGAP2##AK303975|SMAP2|64744|small ArfGAP2##AL133206|SMAP2|64744|small ArfGAP2	0.0	
chr14	106790832	106790976	reg1028512.p1	4.546	+	U32154 AF460767 DQ524080 DQ454738 Y08403 HM774396 AF103161 AJ245070 AY866645 AM233757 AY670731 DQ005273 AB063909 AB363132 AJ556745 AY670715 AY670719 AY670726 AY670727 AY670745 AY670770 AY670773 AY670784 AY670819 AY670831 AY670837 AY670857 AY671081 AY671102 AY671324 AY671379 AY671400 AY671500 AY671586 AY671639 AY671641 AY671703 AY671775 AY671785 AY781815 AY781827 AY866636 DQ065711 DQ926028 DQ926188 DQ926206 FJ492934 AJ430733 EF178114 FJ385294 HM152518 AY392953 L28053 AY671012 AY671034 AY671045 AY671152 AY671174 AY671714 AY671721 L03677 Z75396 Z75404 L23570 BC073765 AK130813 AK301332 AK130585 AK128579 AK128568 AK129620 TSC_hg19_v1_chr14_-_106781004	-10134	-	AJ305231 DQ118259 HM774835 DQ926094 AY866678 EU794438 Z80845 BC087841 TSC_hg19_v1_chr14_-_106774560	-16469	-	AY393053 S85238 TSC_hg19_v1_chr14_-_106746153	-44799	-	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 AF044420 AF044422 AF044425 AF044427 AF044442 AF090355 AF099201 AF174074 AF471431 AJ132850 AJ271549 AJ300787 AJ300793 AJ300798 AJ300803 AJ308463 AJ633622 AJ633623 AY028777 AY033265 AY033266 AY033267 AY530317 AY554176 AY640472 AY640475 AY640477 AY640483 AY640501 AY640511 AY640535 AY640539 AY640541 AY640544 AY640549 AY640550 AY640557 AY640558 AY640561 AY640568 AY640569 AY640573 AY640577 AY685306 AY781859 AY846266 AY846267 AY866744 AY941844 AY941856 AY941857 AY941860 AY941863 AY941865 AY941866 AY941868 AY941892 AY941896 AY941898 AY941901 AY941907 AY941913 AY941935 AY941942 AY941950 AY941953 AY941968 AY941970 AY941982 AY941983 AY941985 AY941986 AY941988 AY941989 AY944708 AY944716 AY971015 AY971027 AY971037 AY971078 AY971081 AY971115 AY971120 AY971130 AY971135 DQ065629 DQ065669 DQ065674 DQ065689 DQ065692 DQ065718 DQ065725 DQ431499 DQ431621 DQ431627 DQ840705 DQ840715 DQ840744 DQ926087 DQ926091 DQ926150 DQ926207 DQ926222 DQ926372 DQ926388 DQ926512 DQ926569 DQ926578 DQ926634 EF177978 EF178004 EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 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EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	390	-	AF460708 AF460709 AF460785 AY003807 AY003817 DQ454548 M33859 M33860 DQ454427 DQ454852 DQ454425 DQ454627 DQ454856 GU552743 DQ454416 DQ454458 GQ232904 GU552731 GU552736 AY003787 AF017463 GU552721 GU552724 GU552725 GU552726 GU552727 GU552728 GU552729 GU552730 AY003850 DQ454418 DQ454671 GQ232774 DQ454432 DQ454433 DQ454901 DQ454979 DQ454980 GQ232865 HM995239 JF810276 AY003855 DQ454422 DQ454434 DQ454622 DQ454870 DQ523887 HM116153 HM116169 HM116182 Z30552 Z30557 Z30561 Z30562 Z30573 Z30576 Z30578 Z30580 Z30581 Z30591 Z30599 Z30674 Z30675 Z30677 DQ454531 DQ454860 DQ454903 EU099089 AF004937 AY003796 AY003804 DQ454392 DQ454610 DQ454833 EU620002 FJ840008 FJ840011 FJ840012 FJ840020 FJ840055 FJ874002 FJ874054 FJ874065 FJ874072 FJ874075 FJ874095 HM116113 HM116114 HM116155 HM116159 HM116160 HM116168 HM116177 HM116195 HM116199 HM116226 AF017459 AF017460 EU619988 AJ487490 AY003825 AJ253061 EU350428 DQ454982 X75022 EF091922 EF175396 EF175402 EF407849 EF441754 GU358660 JF810277 GQ232847 GQ232867 GQ232891 GQ232893 GQ232895 GQ232896 GQ232900 GQ232901 GQ232902 DQ454645 EU099068 EU099071 AF103299 EU090244 EU099076 EU099098 HQ392881 HQ392885 HQ392917 AJ253080 EU099079 EU099096 EU099156 EU099191 EU099252 AJ253066 AM183974 AM183975 AM183976 AM183977 AM183978 AM183995 AF484411 AF103180 AJ253083 AF103278 EF624236 AJ240558 AJ253067 S79918 AJ253059 AJ253072 AJ253074 AJ253079 AJ253081 AJ253082 AJ253084 AJ253087 AJ253088 AJ253089 AJ253090 AJ253091 AJ253092 AJ253093 AJ253094 AJ253095 AJ253098 AJ253102 AJ253103 AJ253104 AJ253108 AJ253109 AJ253110 AJ253112 AJ240555 AJ240556 AJ240557 AJ240560 AJ240561 AJ240566 AJ240574 AJ240575 AJ240576 AJ240577 AJ240580 AJ240581 AJ240590 AJ240595 AJ240604 AJ253044 AJ253050 AJ253054 AJ253077 AJ253085 AY671386 HM996508 Y17927 Y17928 Y17930 Y17931 Y17932 Y17933 Y17934 Y17943 Y17944 Y17945 Y17947 Y17948 Y17949 AY998719 DQ100788 DQ100796 JN110760 JN110800 JN110847 FJ385331 FJ385337 FJ385351 FJ385378 HM774705 HM774878 AF103173 AY193818 EU146315 EU146358 EU146377 EU146394 U21257 U21267 U21268 HM774736 AJ222555 HM995235 X87438 AJ222547 AJ222548 AJ222549 AJ222550 AJ222552 AJ222556 AJ222557 AJ222558 AJ222559 AJ222560 AJ222561 AJ222562 AJ222563 AJ222564 AJ222565 AJ222566 AJ222567 AJ222568 AJ222569 AJ222570 AJ222571 AJ222573 AJ222574 AJ222575 AJ222576 AJ222577 AJ222578 Z46300 Z46301 Z46302 Z46315 Z46316 Z46317 Z46318 Z46319 Z46320 Z46321 Z46322 Z46323 Z46324 Z46325 Z46326 Z46327 Z46328 Z46329 Z46330 Z46331 Z46332 Z46333 Z46334 Z46335 Z46336 Z46337 Z46338 Z46339 Z49139 AJ244942 AJ579251 X64156 X64159 AB063716 AJ244940 AJ279524 AJ279537 AJ556751 AJ579178 AY268371 DQ523935 DQ523975 DQ523980 DQ523984 DQ523987 DQ523990 DQ524003 DQ524006 DQ524007 DQ524018 DQ524044 DQ524065 DQ524068 DQ524074 DQ524077 AB067135 AB067136 AJ244997 AM233792 AM233793 AM233795 AM233801 DQ926349 DQ926350 L34163 X64235 AJ300804 AY670741 AY670790 AY670791 AY670810 AY670816 HM994959 HM995182 HM995183 HM995184 HM995185 HM995187 HM995189 HM995203 HM995204 HM995205 HM995206 HM995207 HM995211 HM995216 HM995244 HM995246 HM995249 HM995308 HM995310 HM995472 HM995477 HM995479 HM995481 HM995550 HM995553 HM995554 HM995743 HM995982 HM996230 HM996238 HM996535 AB063661 AB063671 AB063674 AB066914 AB066915 AB066916 AB066917 AB066918 AB066919 AB066920 AB066921 AB066923 AB066924 AB067034 AB067035 AB067036 AB067037 AB067038 AB067039 AB067040 AB067041 AB067044 AB067046 AB067049 AB067052 AB067053 AB067054 AB067055 AB067056 AB067057 AB067058 AB067059 AB067060 AB067064 AB067066 AB067067 AB067068 AB067084 AB067085 AB067088 AB067089 AB067090 AB067091 AB067092 AB067093 AB067132 AB067133 AB067134 AB067137 AB067142 AB067143 AB067144 AB067145 AB067146 AB067148 AB067149 AB067151 AB110646 AB363152 AB363153 AB363154 AF021948 AF021957 AF021990 AF021991 AF021997 AF022004 AF022005 AF052527 AF062104 AF062113 AF062231 AF062234 AF107233 AF107239 AF107241 AF174041 AF174049 AF174054 AF174085 AF174086 AF174088 AF245309 AF262072 AF262097 AF262100 AF262125 AF262174 AF372845 AJ239335 AJ239362 AJ239377 AJ244929 AJ244931 AJ244935 AJ244937 AJ244938 AJ244939 AJ244941 AJ244943 AJ244944 AJ244951 AJ244959 AJ244960 AJ244962 AJ244966 AJ244967 AJ244968 AJ244969 AJ244972 AJ244973 AJ244975 AJ244978 AJ244982 AJ244984 AJ244985 AJ244987 AJ244988 AJ244990 AJ244991 AJ244992 AJ244994 AJ245008 AJ245009 AJ245011 AJ245013 AJ245017 AJ245028 AJ245035 AJ245036 AJ245039 AJ245040 AJ245041 AJ245042 AJ245043 AJ245044 AJ245046 AJ245049 AJ245051 AJ245052 AJ245054 AJ245057 AJ245065 AJ245236 AJ245238 AJ249631 AJ279513 AJ279519 AJ279521 AJ279526 AJ279531 AJ279535 AJ556773 AJ574778 AJ579118 AJ579121 AJ579122 AJ579124 AJ579129 AJ579135 AJ579164 AJ579165 AJ579167 AJ579175 AJ579176 AJ579201 AJ579206 AJ579208 AJ579211 AJ579213 AJ579240 AJ579241 AJ579242 AJ579243 AJ579246 AJ579248 AJ579249 AJ579250 AJ579253 AJ579255 AJ579256 AJ579257 AJ579258 AJ579259 AJ579260 AJ579286 AJ579287 AJ579289 AJ579290 AJ579302 AJ579304 AY033257 AY062304 AY553641 AY553646 AY670708 AY670709 AY670710 AY670711 AY670716 AY670717 AY670718 AY670720 AY670721 AY670722 AY670723 AY670724 AY670730 AY670736 AY670738 AY670739 AY670743 AY670749 AY670750 AY670755 AY670757 AY670760 AY670761 AY670763 AY670766 AY670767 AY670768 AY670772 AY670775 AY670777 AY670779 AY670781 AY670782 AY670785 AY670787 AY670789 AY670794 AY670795 AY670796 AY670798 AY670801 AY670803 AY670804 AY670811 AY670813 AY670814 AY670815 AY670824 AY670826 AY670827 AY670828 AY670833 AY670834 AY670835 AY670838 AY670839 AY670840 AY670841 AY670842 AY670843 AY670845 AY670846 AY670851 AY670853 AY670855 AY670856 AY670860 AY670863 AY670864 AY670867 AY670870 AY670871 AY670873 AY670875 AY670878 AY670879 AY670882 AY670883 AY670884 AY670885 AY670890 AY670892 AY670893 AY670898 AY670899 AY670900 AY670903 AY670904 AY670905 AY670907 AY670911 AY670913 AY670916 AY670918 AY670919 AY670924 AY670928 AY670929 AY670931 AY670932 AY670935 AY670940 AY670943 AY670944 AY670946 AY670949 AY670952 AY670953 AY670954 AY670962 AY670965 AY670973 AY670974 AY670975 AY670976 AY670977 AY670981 AY670990 AY671010 AY671015 AY671024 AY671047 AY671065 AY671073 AY671078 AY671079 AY671087 AY671093 AY671094 AY671095 AY671096 AY671097 AY671099 AY671100 AY671103 AY671104 AY671105 AY671106 AY671107 AY671108 AY671110 AY671113 AY671115 AY671117 AY671118 AY671120 AY671121 AY671122 AY671123 AY671125 AY671128 AY671129 AY671132 AY671134 AY671135 AY671139 AY671145 AY671153 AY671155 AY671161 AY671209 AY671240 AY671245 AY671257 AY671274 AY671277 AY671283 AY671313 AY671314 AY671315 AY671316 AY671317 AY671319 AY671321 AY671322 AY671323 AY671328 AY671330 AY671332 AY671341 AY671345 AY671347 AY671348 AY671349 AY671354 AY671364 AY671366 AY671370 AY671371 AY671380 AY671382 AY671383 AY671393 AY671409 AY671413 AY671416 AY671422 AY671424 AY671425 AY671427 AY671428 AY671429 AY671430 AY671434 AY671435 AY671436 AY671438 AY671441 AY671443 AY671444 AY671445 AY671446 AY671447 AY671449 AY671452 AY671453 AY671454 AY671455 AY671461 AY671462 AY671464 AY671468 AY671471 AY671478 AY671480 AY671481 AY671483 AY671486 AY671487 AY671491 AY671492 AY671503 AY671505 AY671507 AY671508 AY671510 AY671511 AY671515 AY671518 AY671519 AY671525 AY671527 AY671528 AY671530 AY671532 AY671535 AY671538 AY671539 AY671540 AY671541 AY671543 AY671544 AY671548 AY671555 AY671556 AY671561 AY671564 AY671565 AY671566 AY671568 AY671573 AY671574 AY671577 AY671579 AY671580 AY671581 AY671585 AY671587 AY671591 AY671593 AY671595 AY671612 AY671614 AY671617 AY671619 AY671620 AY671625 AY671629 AY671630 AY671632 AY671634 AY671637 AY671640 AY671642 AY671644 AY671648 AY671650 AY671651 AY671653 AY671658 AY671659 AY671660 AY671663 AY671668 AY671671 AY671676 AY671682 AY671684 AY671685 AY671688 AY671690 AY671691 AY671694 AY671697 AY671698 AY671699 AY671700 AY671702 AY671704 AY671706 AY671707 AY671708 AY671712 AY671716 AY671718 AY671724 AY671732 AY671733 AY671734 AY671735 AY671737 AY671739 AY671741 AY671746 AY671749 AY671750 AY671751 AY671753 AY671756 AY671763 AY671764 AY671765 AY671766 AY671767 AY671769 AY671771 AY671776 AY671781 AY671784 AY885181 AY941889 AY941914 AY941957 DQ005274 DQ005285 DQ100660 DQ100674 DQ100703 DQ100725 DQ100792 DQ100829 DQ100832 DQ100964 DQ926158 DQ926198 DQ926208 DQ926421 DQ926458 DQ926468 DQ926470 DQ926478 DQ926497 DQ926599 DQ926603 EF544907 EF544958 EF544959 EF544973 FJ208782 FJ492903 FJ492909 FJ492910 GU570373 HM152498 HM152511 HM152516 HQ392880 HQ689741 L12192 L23518 L23934 L25293 M26998 M74468 S64473 S66098 S67110 U00497 U00556 U22391 U71103 U89766 U97246 X56592 X87440 Z35492 Z46269 Z46271 Z46272 Z46273 Z46275 Z46277 Z46279 Z46282 Z46304 Z46305 Z46306 Z46307 Z46308 Z46340 Z46341 Z46342 Z49135 Z49140 Z49141 Z49143 Z70604 Z70605 Z70610 Z70616 Z70617 Z70625 Z70626 Z70627 Z70637 Z70638 Z70639 Z70640 Z70641 Z70642 Z70643 Z70644 Z70650 Z74665 Z74695 AY670806 AY670808 AY957532 AY686937 AY957534 DQ535279 DQ535294 DQ535296 DQ535314 DQ535320 DQ535326 DQ535459 EF178028 EF178136 HM996258 M84508 FJ039792 M84512 X54441 AY671298 AY670999 AY671028 AF283780 AF283781 M74018 M74021 AY670983 AY670985 AY670987 AY670989 AY670992 AY670993 AY670995 AY670997 AY670998 AY671018 AY671025 AY671033 AY671043 AY671307 AY671310 AY671046 AY671049 AY671205 AF283784 AY671151 AY671233 AJ579207 AY670982 AY671003 AY671029 AY671050 AY671156 AY671160 AY671171 AY671177 AY671190 AY671199 AY671201 AY671212 AY671226 AY671232 AY671235 AY671236 AY671250 AY671251 AY671261 AY671262 AY671270 AY671272 AY671278 AY671281 AY671287 AY671308 Z47229 AF062101 AF062146 AF062152 AF062158 AF062173 AF062181 AF062183 AF062187 AF062192 AF062196 AF062217 AF062218 AF062250 AJ579203 AY204755 AY204757 AY204759 AY204761 AY671006 AY671008 AY671061 AY671064 AY671168 AY671175 AY671183 AY671200 AY671207 AY671220 AY671238 AY671258 AY671268 AY671275 AY671289 AY671290 AY671303 AY671305 AY671696 AY671705 AY671713 AY671722 AY671727 AY671728 S59161 X64152 X64153 X65904 Z47228 Z47234 Z47241 Z75362 Z75374 Z75376 Z75379 Z75386 Z75389 Z75392 Z75394 Z75398 CU674902 CU678316 BC002963 BC073767 CU675962 BC017356 BC019235 BC001872 BC006180 BX538126 AK301454 TSC_hg19_v1_chr14_-_106830060 AK126280 AK128649 AK127921 CR933690	39002	-	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 AJ245014 AJ245018 AJ245021 AJ245023 AJ245024 AJ245030 AJ245033 AJ245034 AJ245038 AJ245056 AJ245060 AJ245061 AJ245071 AJ249629 AJ279514 AJ279515 AJ279525 AJ279530 AJ308449 AJ389175 AJ389176 AJ414019 AJ416561 AJ555264 AJ556674 AJ556675 AJ556676 AJ556691 AJ556693 AJ574781 AJ579117 AJ579126 AJ579130 AJ579131 AJ579134 AJ579138 AJ579166 AJ579168 AJ579169 AJ579170 AJ579179 AJ579200 AJ579202 AJ579205 AJ579209 AJ579210 AJ579214 AJ579244 AJ579245 AJ579292 AJ579293 AJ579297 AJ617569 AY165854 AY268372 AY268373 AY300037 AY577300 AY640552 AY670713 AY670734 AY670740 AY670742 AY670747 AY670751 AY670754 AY670758 AY670762 AY670771 AY670774 AY670799 AY670802 AY670805 AY670817 AY670822 AY670823 AY670825 AY670849 AY670850 AY670858 AY670859 AY670865 AY670874 AY670881 AY670894 AY670896 AY670897 AY670902 AY670914 AY670920 AY670922 AY670947 AY670950 AY670955 AY670960 AY670961 AY670970 AY670972 AY670978 AY670980 AY670986 AY670991 AY671017 AY671060 AY671089 AY671090 AY671101 AY671109 AY671112 AY671114 AY671119 AY671124 AY671126 AY671136 AY671137 AY671140 AY671146 AY671264 AY671318 AY671368 AY671369 AY671384 AY671392 AY671418 AY671433 AY671439 AY671482 AY671489 AY671517 AY671524 AY671534 AY671536 AY671545 AY671552 AY671560 AY671562 AY671563 AY671567 AY671572 AY671576 AY671578 AY671582 AY671583 AY671588 AY671598 AY671599 AY671600 AY671602 AY671616 AY671624 AY671626 AY671635 AY671638 AY671661 AY671672 AY671677 AY671681 AY671730 AY671736 AY671744 AY671752 AY671773 AY671774 AY671778 AY671780 AY671786 AY781849 AY885184 AY941931 AY941962 AY941975 AY960198 AY960201 AY971014 AY971044 AY971045 AY971080 AY971086 AY998723 DQ005257 DQ065676 DQ100673 DQ100687 DQ100701 DQ100784 DQ100821 DQ100822 DQ100824 DQ100825 DQ100897 DQ100953 DQ205162 DQ205173 DQ212518 DQ212520 DQ328872 DQ431572 DQ431610 DQ926162 DQ926290 DQ926291 DQ926302 DQ926317 DQ926323 DQ926515 DQ926519 DQ926521 DQ926608 FJ039783 FJ039790 FJ039791 FJ385371 FJ385402 FR820867 FR820868 FR820869 FR820870 FR820871 FR820872 FR820873 FR820875 GU570374 HM152512 HM152521 HQ689769 JN201901 L12190 L43117 U00494 U00566 U00571 U00578 U00581 U64496 U96278 U96280 U96285 U96287 U97243 X84336 X84339 Y08428 Y09249 Y09390 Z18316 Z46285 Z70608 Z70621 Z70622 Z70623 Z70631 Z70632 Z70654 Z70655 Z70656 Z70657 DQ926182 DQ926347 DQ926348 AY944695 DQ535289 DQ535393 DQ535427 DQ535433 DQ535456 EF177973 EF178111 EF178132 FJ385279 AJ579303 X54447 AY392937 X17678 S63731 X54437 Z14197 AY671021 AY670994 AY671000 AY671001 AY671009 AY671012 AY671016 AY671023 AY671031 AY671036 AY671054 AY671142 AY671197 AY671335 AY671182 AF013622 AY671048 AY671052 AY671159 AY671179 AY671239 AY671263 AY671276 AY671279 AY671282 AF013619 AF062204 AF062240 AF247737 AY671165 AY671185 AY671217 AY671297 AY671693 AY671723 AY671725 CU677619 EU937522 L23556 L38425 M99607 U86523 U86524 X65903 X65911 Z14198 Z75364 Z75388 AY671162 X52895 TSC_hg19_v1_chr14_-_106878091 X56158 M97921 AF417843 AK057754 AK057775 AK130529 BC025985 BX640824 AK130609 Z14206 AK126352 AK129514 AK129592 AK129637 AK130589 AK130611 BC016369 BX538077 BX648082 BX648874 Z14195 AK095222 AK303185	87003	-	BC073765|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK130813|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130585|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128568|IGHD|3495|immunoglobulin heavy constant delta##AK129620|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC087841|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF174049|SKAP2|8935|src kinase associated phosphoprotein 2##BC002963|IGHM|3507|immunoglobulin heavy constant mu##BC073767|IGHM|3507|immunoglobulin heavy constant mu##BC017356|IGHM|3507|immunoglobulin heavy constant mu##BC019235|IGHM|3507|immunoglobulin heavy constant mu##BC001872|IGHM|3507|immunoglobulin heavy constant mu##BC006180|IGHM|3507|immunoglobulin heavy constant mu##BX538126|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK126280|IGHD|3495|immunoglobulin heavy constant delta##AK128649|IGHD|3495|immunoglobulin heavy constant delta##AK127921|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.348126	CTCF.p2:26:0.348
chr20	24911820	24911925	reg1028750.p1	4.546	+	TSC_hg19_v1_chr20_+_24450295 BC030637	-461570	+	AK024282 NM_024893	-462038	+	BC040904 NM_178311	-942457	-	TSC_hg19_v1_chr20_+_24929865 NM_003650	17991	+	TSC_hg19_v1_chr20_+_24929907 AF031824 BC015507 AB015225 CU677327 BT009825 AF036342 CR541860 CR541878	18150	+	TSC_hg19_v1_chr20_-_24973355 CU678464 BC003501	61458	-	BC030637|SYNDIG1|79953|synapse differentiation inducing 1##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1##BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_003650|CST7|8530|cystatin F (leukocystatin)##AF031824|CST7|8530|cystatin F (leukocystatin)##BC015507|CST7|8530|cystatin F (leukocystatin)##AB015225|CST7|8530|cystatin F (leukocystatin)##BT009825|CST7|8530|cystatin F (leukocystatin)##AF036342|CST7|8530|cystatin F (leukocystatin)##CR541860|CST7|8530|cystatin F (leukocystatin)##CR541878|CST7|8530|cystatin F (leukocystatin)##BC003501|C20orf3|57136|chromosome 20 open reading frame 3	0.0	
chr5	36415037	36415172	reg1028903.p1	4.546	+	BC017951 AK058151 AK302947 TSC_hg19_v1_chr5_-_36302002 BC047660 NM_001161429 NM_145000	-113100	-	BC062567 NM_153013 AK304009	-172793	-	NM_001085411 TSC_hg19_v1_chr5_-_36241996	-173116	-	NM_001166696 NM_004172	191352	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	191624	+	NM_001166695 U03504 AB529121 AY954110 TSC_hg19_v1_chr5_+_36608562	193392	+	BC017951|RANBP3L|202151|RAN binding protein 3-like##AK058151|RANBP3L|202151|RAN binding protein 3-like##AK302947|RANBP3L|202151|RAN binding protein 3-like##BC047660|RANBP3L|202151|RAN binding protein 3-like##NM_001161429|RANBP3L|202151|RAN binding protein 3-like##NM_145000|RANBP3L|202151|RAN binding protein 3-like##BC062567|NADKD1|133686|NAD kinase domain containing 1##NM_153013|NADKD1|133686|NAD kinase domain containing 1##AK304009|NADKD1|133686|NAD kinase domain containing 1##NM_001085411|NADKD1|133686|NAD kinase domain containing 1##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	0.049508	
chr12	122502026	122502123	reg1028717.p2	4.545	+	AK296159 TSC_hg19_v1_chr12_+_122459903 NM_001024808 NM_020993 AK316486 BC113627 BC094723 HQ258124 AB590498	-42181	+	TSC_hg19_v1_chr12_+_122356497 NM_001178003 NM_144668 BC028421 BC036233	-145593	+	TSC_hg19_v1_chr12_+_122326731 AB003177 NM_002813 AK315389 BC002383 BC004184 BC004213 DQ893594 EU831432 EU831524 AB528684	-175379	+	TSC_hg19_v1_chr12_+_122516655 BC151841 NM_014938	14533	+	TSC_hg19_v1_chr12_+_122516682 AF312918	14643	+	BC069272 TSC_hg19_v1_chr12_+_122614551	112446	+	AK296159|BCL7A|605|B-cell CLL/lymphoma 7A##NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A##NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A##AK316486|BCL7A|605|B-cell CLL/lymphoma 7A##BC113627|BCL7A|605|B-cell CLL/lymphoma 7A##BC094723|BCL7A|605|B-cell CLL/lymphoma 7A##HQ258124|BCL7A|605|B-cell CLL/lymphoma 7A##NM_001178003|WDR66|144406|WD repeat domain 66##NM_144668|WDR66|144406|WD repeat domain 66##BC028421|WDR66|144406|WD repeat domain 66##BC036233|WDR66|144406|WD repeat domain 66##NM_002813|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK315389|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC002383|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004184|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004213|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##DQ893594|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831432|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831524|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC151841|MLXIP|22877|MLX interacting protein##NM_014938|MLXIP|22877|MLX interacting protein##AF312918|MLXIP|22877|MLX interacting protein##BC069272|MLXIP|22877|MLX interacting protein	0.0	
chr1	25444059	25444181	reg1029992.p1	4.545	+	BC013362 AK310945 NM_001031680 AF022726	-152578	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-187334	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-187381	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	114867	-	BC065040 TSC_hg19_v1_chr1_-_25573922	129803	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	129853	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.988717	CTCF.p2:7:0.972
chr15	70503120	70503239	reg1030864.p2	4.545	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-112936	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-112952	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-161270	-	TSC_hg19_v1_chr15_-_70878946 BC040579	375765	-	BC016881 AL834243 NM_001008224 AK055435	491448	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	552663	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.495573	CTCF.p2:4:0.496
chr6	37533996	37534121	reg1001168.p2	4.545	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-66362	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-66406	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-130621	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	131648	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	253232	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	253632	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.0	
chr9	15529646	15529794	reg1027016.p1	4.545	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-18760	-	AF098483 AF098482 NM_021144	-19473	-	TSC_hg19_v1_chr9_+_15422877 AB527501 EU446705 BC014985	-106808	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	23301	+	TSC_hg19_v1_chr9_-_16727889 AY438376	1198177	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	1340947	-	BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2	0.0	
chr1	209820012	209820113	reg1028712.p1	4.544	+	NM_020439 AK095713 AK289675 AF428261 BC032787	-63002	+	AK091113 AX746785 NM_001104548	-217897	+	TSC_hg19_v1_chr1_-_208417635 NM_025179	-1402413	-	TSC_hg19_v1_chr1_-_209824718 NM_001017402	4617	-	L25541 NM_001127641 D37766 TSC_hg19_v1_chr1_-_209825771 AK296851 AK309524	5662	-	TSC_hg19_v1_chr1_-_209825820 BC058922 NM_000228	5762	-	NM_020439|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK095713|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AK289675|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##AF428261|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##BC032787|CAMK1G|57172|calcium/calmodulin-dependent protein kinase IG##NM_001104548|MIR205HG|642587|MIR205 host gene (non-protein coding)##NM_025179|PLXNA2|5362|plexin A2##NM_001017402|LAMB3|3914|laminin, beta 3##L25541|LAMB3|3914|laminin, beta 3##NM_001127641|LAMB3|3914|laminin, beta 3##D37766|LAMB3|3914|laminin, beta 3##AK296851|LAMB3|3914|laminin, beta 3##AK309524|LAMB3|3914|laminin, beta 3##BC058922|LAMB3|3914|laminin, beta 3##NM_000228|LAMB3|3914|laminin, beta 3	0.866652	CTCF.p2:8:0.844
chr12	129283195	129283338	reg1028431.p1	4.544	+	NM_001136103	-531319	+	NM_052907	-3472105	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-3733198	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	25177	-	BC043528 TSC_hg19_v1_chr12_+_129337985	54718	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	54821	+	NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.518056	CTCF.p2:18:0.518
chr12	49760434	49760500	reg1030716.p1	4.544	+	BC033236 NM_024902	-19427	+	TSC_hg19_v1_chr12_+_49740718 AK055747	-19764	+	BC110812 AF466366 NM_001008223	-29504	-	TSC_hg19_v1_chr12_+_49760679 AK095582 NM_023071	222	+	TSC_hg19_v1_chr12_+_49761253 BC017767 AL833614 BC048299 AK292334 AK023202 BX648916 BC032441	927	+	TSC_hg19_v1_chr12_+_49932842 AB033108 NM_012284 BC144254 BC150602 AB022696 AB384589	172553	+	BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##AK055747|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##BC110812|C1QL4|338761|complement component 1, q subcomponent-like 4##AF466366|C1QL4|338761|complement component 1, q subcomponent-like 4##NM_001008223|C1QL4|338761|complement component 1, q subcomponent-like 4##AK095582|SPATS2|65244|spermatogenesis associated, serine-rich 2##NM_023071|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2##AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2##BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2##AB033108|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##NM_012284|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC144254|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC150602|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AB022696|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3	0.0	
chr12	97051992	97052075	reg1032476.p1	4.544	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-257716	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	-258050	-	TSC_hg19_v1_chr12_+_96588254 BC017371	-463766	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	248998	+	BC027605 NM_001135175	249210	+	TSC_hg19_v1_chr12_-_98897622 AK126817	1845594	-	AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK126817|LOC643770|643770|uncharacterized LOC643770	0.0	
chr15	81561654	81561834	reg1029536.p2	4.544	+	NM_172217 AY324389	-44055	+	AK124725 NM_001172128 AK124565 AK131530	-72526	+	AK302120 BC062471 NM_173528 AK307565	-135117	+	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	27560	+	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	54750	-	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	104741	-	NM_172217|IL16|3603|interleukin 16##AY324389|IL16|3603|interleukin 16##AK124725|IL16|3603|interleukin 16##NM_001172128|IL16|3603|interleukin 16##AK124565|IL16|3603|interleukin 16##AK131530|IL16|3603|interleukin 16##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3	0.0	
chr19	57230514	57230649	reg1034281.p1	4.544	+	AK299565 NM_001005850 TSC_hg19_v1_chr19_-_57183124	-47456	-	AK095199 NM_001193628	-76055	+	TSC_hg19_v1_chr19_+_57106669 NM_021216 BC014280	-123922	+	AF208970 NM_001146186	105792	-	AB003039 AF208967 AF208968 AF208969 AB006625 BC150272 AF166122 TSC_hg19_v1_chr19_-_57352095 AK295679 AK307476 NM_001146184 NM_001146185 NM_001146187 NM_006210 NM_001146326 NM_001146327 NM_015363	121496	-	AK308285 AF124433 NM_020903	400878	+	AK299565|ZNF835|90485|zinc finger protein 835##NM_001005850|ZNF835|90485|zinc finger protein 835##AK095199|LOC147670|147670|uncharacterized LOC147670##NM_001193628|LOC147670|147670|uncharacterized LOC147670##NM_021216|ZNF71|58491|zinc finger protein 71##BC014280|ZNF71|58491|zinc finger protein 71##AF208970|PEG3|5178|paternally expressed 3##NM_001146186|PEG3|5178|paternally expressed 3##AB003039|PEG3|5178|paternally expressed 3##AF208967|PEG3|5178|paternally expressed 3##AF208968|PEG3|5178|paternally expressed 3##AF208969|PEG3|5178|paternally expressed 3##AB006625|PEG3|5178|paternally expressed 3##BC150272|PEG3|5178|paternally expressed 3##AF166122|ZIM2|23619|zinc finger, imprinted 2##AK295679|PEG3|5178|paternally expressed 3##AK307476|PEG3|5178|paternally expressed 3##NM_001146184|PEG3|5178|paternally expressed 3##NM_001146185|PEG3|5178|paternally expressed 3##NM_001146187|PEG3|5178|paternally expressed 3##NM_006210|PEG3|5178|paternally expressed 3##NM_001146326|ZIM2|23619|zinc finger, imprinted 2##NM_001146327|ZIM2|23619|zinc finger, imprinted 2##NM_015363|ZIM2|23619|zinc finger, imprinted 2##AK308285|USP29|57663|ubiquitin specific peptidase 29##AF124433|USP29|57663|ubiquitin specific peptidase 29##NM_020903|USP29|57663|ubiquitin specific peptidase 29	0.830068	CTCF.p2:18:0.830
chr4	98074321	98074420	reg1028295.p1	4.544	+	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	-1313112	+	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	-1603994	-	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	-1604191	-	CU691442 BC036870 NM_174952	989975	-	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	1108224	+	TSC_hg19_v1_chr4_-_99579781 BC009704 AF065389 AK315723 NM_005723	1505389	-	NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC009704|TSPAN5|10098|tetraspanin 5##AF065389|TSPAN5|10098|tetraspanin 5##AK315723|TSPAN5|10098|tetraspanin 5##NM_005723|TSPAN5|10098|tetraspanin 5	0.995729	CTCF.p2:18:0.996
chr11	21954773	21954877	reg1028116.p1	4.543	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	-1263633	+	NM_004211 AF085412	-1333878	+	BC047226 TSC_hg19_v1_chr11_+_20409261 AK301449 AK298185 AK300591 BC037544 AB590779 EU831425 EU831518	-1545565	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	259822	+	AB032435 NM_020346	404841	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	692536	-	AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##BC047226|PRMT3|10196|protein arginine methyltransferase 3##AK301449|PRMT3|10196|protein arginine methyltransferase 3##AK298185|PRMT3|10196|protein arginine methyltransferase 3##AK300591|PRMT3|10196|protein arginine methyltransferase 3##BC037544|PRMT3|10196|protein arginine methyltransferase 3##EU831425|PRMT3|10196|protein arginine methyltransferase 3##EU831518|PRMT3|10196|protein arginine methyltransferase 3##AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F	0.991367	CTCF.p2:-1:0.991
chr11	65339493	65339598	reg1031803.p1	4.543	+	TSC_hg19_v1_chr11_+_65337947 AB001740 NM_006396 BC014791 DQ891782 DQ894966	-1603	+	AF085877 TSC_hg19_v1_chr11_-_65337892 AK057616	-1726	-	TSC_hg19_v1_chr11_-_65326129 AK299351	-13355	-	BC032373 NM_001098784 NM_001098785 NM_152832 AF052151 TSC_hg19_v1_chr11_+_65340004	386	+	TSC_hg19_v1_chr11_+_65343506 NM_001099409	3958	+	AF110522 AF110523 AF110524 NM_005714 NM_033347 NM_033348 NM_033455	23921	-	AB001740|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##NM_006396|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##BC014791|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##DQ891782|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##DQ894966|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##AF085877|LOC254100|254100|uncharacterized LOC254100##AK057616|LOC254100|254100|uncharacterized LOC254100##AK299351|LTBP3|4054|latent transforming growth factor beta binding protein 3##BC032373|FAM89B|23625|family with sequence similarity 89, member B##NM_001098784|FAM89B|23625|family with sequence similarity 89, member B##NM_001098785|FAM89B|23625|family with sequence similarity 89, member B##NM_152832|FAM89B|23625|family with sequence similarity 89, member B##AF052151|FAM89B|23625|family with sequence similarity 89, member B##NM_001099409|EHBP1L1|254102|EH domain binding protein 1-like 1##AF110522|KCNK7|10089|potassium channel, subfamily K, member 7##AF110523|KCNK7|10089|potassium channel, subfamily K, member 7##AF110524|KCNK7|10089|potassium channel, subfamily K, member 7##NM_005714|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033347|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033348|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033455|KCNK7|10089|potassium channel, subfamily K, member 7	0.995924	CTCF.p2:-8:0.996
chr1	1976368	1976484	reg1029999.p1	4.543	+	TSC_hg19_v1_chr1_+_1950794 NM_000815 AK290861 BC033801 AB385062 DQ892050 AF016917	-25623	+	AK127388 NM_001080484	-41151	-	AB528804 GQ129259 GQ129260 TSC_hg19_v1_chr1_-_1850719 NM_178545	-125705	-	TSC_hg19_v1_chr1_+_1981920 BC014270 NM_002744 BC008058 AB464093 DQ892929 DQ893922 DQ896178 CU675909 AK290995 BT007082 L14283 Z15108	5568	+	AK294649 NM_001033581	28658	+	NM_001242874 AK294782	29041	+	NM_000815|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##AK290861|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##BC033801|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##DQ892050|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##AF016917|GABRD|2563|gamma-aminobutyric acid (GABA) A receptor, delta##AK127388|KIAA1751|85452|KIAA1751##NM_001080484|KIAA1751|85452|KIAA1751##GQ129259|TMEM52|339456|transmembrane protein 52##GQ129260|TMEM52|339456|transmembrane protein 52##NM_178545|TMEM52|339456|transmembrane protein 52##BC014270|PRKCZ|5590|protein kinase C, zeta##NM_002744|PRKCZ|5590|protein kinase C, zeta##BC008058|PRKCZ|5590|protein kinase C, zeta##DQ892929|PRKCZ|5590|protein kinase C, zeta##DQ893922|PRKCZ|5590|protein kinase C, zeta##DQ896178|PRKCZ|5590|protein kinase C, zeta##AK290995|PRKCZ|5590|protein kinase C, zeta##BT007082|PRKCZ|5590|protein kinase C, zeta##L14283|PRKCZ|5590|protein kinase C, zeta##Z15108|PRKCZ|5590|protein kinase C, zeta##AK294649|PRKCZ|5590|protein kinase C, zeta##NM_001033581|PRKCZ|5590|protein kinase C, zeta##NM_001242874|PRKCZ|5590|protein kinase C, zeta##AK294782|PRKCZ|5590|protein kinase C, zeta	0.941678	CTCF.p2:16:0.942
chr13	77911422	77911524	reg1031337.p1	4.543	+	NM_015057 TSC_hg19_v1_chr13_-_77901230	-10270	-	TSC_hg19_v1_chr13_-_77601303 AK314442 NM_012158	-310142	-	TSC_hg19_v1_chr13_-_77601295 AL833187 BC063796 BC072448	-310191	-	NM_001160706 NM_003843 NM_144777 BC020726 AF045941 AK025320 AK222720 AK301659	198378	+	TSC_hg19_v1_chr13_+_78271822 NM_001242868	360431	+	AK294201 NM_001040153	361542	+	NM_015057|MYCBP2|23077|MYC binding protein 2##AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3##AL833187|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC063796|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC072448|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_001160706|SCEL|8796|sciellin##NM_003843|SCEL|8796|sciellin##NM_144777|SCEL|8796|sciellin##BC020726|SCEL|8796|sciellin##AF045941|SCEL|8796|sciellin##AK025320|SCEL|8796|sciellin##AK222720|SCEL|8796|sciellin##AK301659|SCEL|8796|sciellin##NM_001242868|SLAIN1|122060|SLAIN motif family, member 1##AK294201|SLAIN1|122060|SLAIN motif family, member 1##NM_001040153|SLAIN1|122060|SLAIN motif family, member 1	0.895475	CTCF.p2:6:0.871
chr17	73056198	73056306	reg1031713.p1	4.543	+	TSC_hg19_v1_chr17_+_73043325 D79998	-12919	+	TSC_hg19_v1_chr17_+_73043288 BC033329 NM_015353	-13023	+	BC032245 TSC_hg19_v1_chr17_-_73043079	-13173	-	TSC_hg19_v1_chr17_+_73084056 BC009684 NM_004695	27803	+	TSC_hg19_v1_chr17_+_73106069 AK300997 AK310697 BC011728 NM_024585	49802	+	TSC_hg19_v1_chr17_-_73127869 CU692564 BC002516 BC022334 BC008183 BC047763 BC017454 AF154829 AK000419 NM_001252377 NM_014595	71605	-	D79998|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC033329|KCTD2|23510|potassium channel tetramerisation domain containing 2##NM_015353|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC032245|ATP5H|10476|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d##BC009684|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##NM_004695|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##AK300997|ARMC7|79637|armadillo repeat containing 7##BC011728|ARMC7|79637|armadillo repeat containing 7##NM_024585|ARMC7|79637|armadillo repeat containing 7##BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic##AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic	0.324857	CTCF.p2:5:0.325
chr18	77226610	77226785	reg1030655.p2	4.543	+	TSC_hg19_v1_chr18_+_77160328 NM_172387 NM_172389 U59736 AK293760 U80918 X99829 EU887560 EU887562 EU887564 EU887566	-66380	+	TSC_hg19_v1_chr18_+_77155967 U08015 BC104753 BC112243 BC143457 EU887559 EU887561 EU887563 EU887565	-70602	+	U80919 TSC_hg19_v1_chr18_+_77155946	-70751	+	BC045628 TSC_hg19_v1_chr18_+_77253425	26683	+	TSC_hg19_v1_chr18_-_77439359 AK002023	212616	-	TSC_hg19_v1_chr18_-_77439740 AK098581	213044	-	NM_172387|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172389|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U59736|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK293760|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80918|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887560|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887562|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887564|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887566|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U08015|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC104753|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC112243|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC143457|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887559|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887561|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887563|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887565|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80919|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK098581|FLJ25715|284241|uncharacterized protein FLJ25715	0.988056	CTCF.p2:-44:0.988
chr2	102268424	102268559	reg1031066.p1	4.543	+	AK131289 AK298610 NM_001145664 TSC_hg19_v1_chr2_-_102091212	-177298	-	TSC_hg19_v1_chr2_-_102003966 BC032949 BC047514 NM_153836 AB046109	-264502	-	TSC_hg19_v1_chr2_-_102003859 AK094970	-264628	-	TSC_hg19_v1_chr2_+_102314168 NM_001242560 NM_004834 NM_145686 BC064691 AK296396 AF096300 NM_001242559 NM_145687 AB384511 AY212247 AY834276	45861	+	TSC_hg19_v1_chr2_+_102508334 BC045694	239851	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	240041	+	AK131289|RFX8|731220|regulatory factor X, 8##AK298610|RFX8|731220|regulatory factor X, 8##NM_001145664|RFX8|731220|regulatory factor X, 8##BC032949|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC047514|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_153836|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AB046109|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AK094970|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4	0.0	
chr9	92015382	92015537	reg1026982.p1	4.543	+	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-82041	+	TSC_hg19_v1_chr9_+_91926112 NM_001827 X54942 BC006458 AB527990 BT006630 CR407630 CR542118	-89301	+	BC026314 NM_016848 TSC_hg19_v1_chr9_-_91793734	-221749	-	BC054500 NM_001142287 NM_006378	79151	-	BX648216 TSC_hg19_v1_chr9_-_92113005	97548	-	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	204522	+	AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2##X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma	0.0	
chr10	88149460	88149603	reg1025662.p2	4.542	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	-23268	-	TSC_hg19_v1_chr10_+_86184685 AK294321	-1964836	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-2017913	+	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	131963	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	131999	-	DQ426884 NM_001030015 NM_033282 BC029291 BC113558 BC143688	264863	+	AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_001030015|OPN4|94233|opsin 4##NM_033282|OPN4|94233|opsin 4##BC029291|OPN4|94233|opsin 4##BC113558|OPN4|94233|opsin 4##BC143688|OPN4|94233|opsin 4	0.02235	
chr17	48556258	48556389	reg1018954.p2	4.542	+	TSC_hg19_v1_chr17_+_48556220 AK022105 AK293814 AK297655 BC050538	-91	+	TSC_hg19_v1_chr17_+_48556216 AK002026 NM_018346 AK222472	-125	+	CU690332 BC036360 AF371328 BC073974 NM_001267 TSC_hg19_v1_chr17_-_48546242 AK292177	-10103	-	AK303041 NM_032133 TSC_hg19_v1_chr17_+_48585809 BC036358	29493	+	TSC_hg19_v1_chr17_+_48585945 BC028393 AB083068 AK314052 AL832225	29635	+	TSC_hg19_v1_chr17_+_48610049 NM_017957	53724	+	AK022105|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK293814|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK297655|RSAD1|55316|radical S-adenosyl methionine domain containing 1##BC050538|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK002026|RSAD1|55316|radical S-adenosyl methionine domain containing 1##NM_018346|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK222472|RSAD1|55316|radical S-adenosyl methionine domain containing 1##BC036360|CHAD|1101|chondroadherin##AF371328|CHAD|1101|chondroadherin##BC073974|CHAD|1101|chondroadherin##NM_001267|CHAD|1101|chondroadherin##AK292177|CHAD|1101|chondroadherin##AK303041|MYCBPAP|84073|MYCBP associated protein##NM_032133|MYCBPAP|84073|MYCBP associated protein##BC036358|MYCBPAP|84073|MYCBP associated protein##BC028393|MYCBPAP|84073|MYCBP associated protein##AB083068|MYCBPAP|84073|MYCBP associated protein##AK314052|MYCBPAP|84073|MYCBP associated protein##AL832225|MYCBPAP|84073|MYCBP associated protein##NM_017957|EPN3|55040|epsin 3	0.0	
chr19	40162475	40162655	reg1000381.p1	4.542	+	FJ613352 NM_001190441	-16020	+	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	-69380	+	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	-131745	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	32478	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	66074	-	NM_001143832	104668	+	FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##NM_001143832|LEUTX|342900|leucine twenty homeobox	0.0	
chr3	135969994	135970104	reg1029152.p1	4.542	+	S67325 TSC_hg19_v1_chr3_+_135969193 BC013768 AB209009 BC053661 AK295312 AK130359 AK225733 AK303079 AK225215 AL831978 CU680676	-847	+	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	-885	+	TSC_hg19_v1_chr3_-_135914658 AK091956 NM_018133	-55368	-	TSC_hg19_v1_chr3_-_136471221 BC040708 AB210023 AK309934 BC064699 CR749247 NM_005862	501166	-	BC050423 NM_001097599 NM_001097600 NM_025246 TSC_hg19_v1_chr3_+_136537897 BC022557 AK314079 BC000111 AL136661	567870	+	TSC_hg19_v1_chr3_+_136581071 NM_006153 BC006403	610991	+	S67325|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC013768|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AB209009|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC053661|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK295312|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK130359|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225733|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK303079|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225215|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AL831978|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK091956|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_018133|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##BC040708|STAG1|10274|stromal antigen 1##AB210023|STAG1|10274|stromal antigen 1##AK309934|STAG1|10274|stromal antigen 1##BC064699|STAG1|10274|stromal antigen 1##CR749247|STAG1|10274|stromal antigen 1##NM_005862|STAG1|10274|stromal antigen 1##BC050423|TMEM22|80723|transmembrane protein 22##NM_001097599|TMEM22|80723|transmembrane protein 22##NM_001097600|TMEM22|80723|transmembrane protein 22##NM_025246|TMEM22|80723|transmembrane protein 22##BC022557|TMEM22|80723|transmembrane protein 22##AK314079|TMEM22|80723|transmembrane protein 22##BC000111|TMEM22|80723|transmembrane protein 22##AL136661|TMEM22|80723|transmembrane protein 22##NM_006153|NCK1|4690|NCK adaptor protein 1##BC006403|NCK1|4690|NCK adaptor protein 1	0.0	
chr3	23632556	23632736	reg1028853.p2	4.542	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	-387891	+	TSC_hg19_v1_chr3_+_23244600 AK307075	-388063	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-1218512	-	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	214764	+	AK314854 TSC_hg19_v1_chr3_+_23847474	214828	+	AK295354 NM_001202476	219287	+	AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK310298|ZNF385D|79750|zinc finger protein 385D##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##AK314854|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_001202476|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.012734	
chr6	11785719	11785811	reg1027887.p1	4.542	+	NM_001143948 NM_032744	-6486	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-247267	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-403225	-	NM_002114	226958	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	504828	+	TSC_hg19_v1_chr6_+_12514301 D28417	728537	+	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr6_dbb_hap3	4497512	4497608	reg1030530.p1	4.542	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.960769	CTCF.p2:8:0.961
chr1	217485251	217485380	reg1029837.p1	4.541	+	CR749497 BX647076 NM_001134285	-174220	-	NM_001243505	-222120	-	AF058291 AK298851 AK291028 BX649009 NM_001243506 NM_206594 NM_206595	-222349	-	AB527654 CU687736 BC042193 TSC_hg19_v1_chr1_-_217804402 BC063474 AK001114 AK291238 NM_018040 BC027719	319067	-	AY963797 AK310291 AK098591 BC014608 NM_138796 TSC_hg19_v1_chr1_+_217804714 EU832110 EU832204	319378	+	NM_016052 TSC_hg19_v1_chr1_+_218458635	973317	+	CR749497|ESRRG|2104|estrogen-related receptor gamma##BX647076|ESRRG|2104|estrogen-related receptor gamma##NM_001134285|ESRRG|2104|estrogen-related receptor gamma##NM_001243505|ESRRG|2104|estrogen-related receptor gamma##AF058291|ESRRG|2104|estrogen-related receptor gamma##AK298851|ESRRG|2104|estrogen-related receptor gamma##AK291028|ESRRG|2104|estrogen-related receptor gamma##BX649009|ESRRG|2104|estrogen-related receptor gamma##NM_001243506|ESRRG|2104|estrogen-related receptor gamma##NM_206594|ESRRG|2104|estrogen-related receptor gamma##NM_206595|ESRRG|2104|estrogen-related receptor gamma##BC042193|GPATCH2|55105|G patch domain containing 2##BC063474|GPATCH2|55105|G patch domain containing 2##AK001114|GPATCH2|55105|G patch domain containing 2##AK291238|GPATCH2|55105|G patch domain containing 2##NM_018040|GPATCH2|55105|G patch domain containing 2##BC027719|GPATCH2|55105|G patch domain containing 2##AY963797|SPATA17|128153|spermatogenesis associated 17##AK310291|SPATA17|128153|spermatogenesis associated 17##AK098591|SPATA17|128153|spermatogenesis associated 17##BC014608|SPATA17|128153|spermatogenesis associated 17##NM_138796|SPATA17|128153|spermatogenesis associated 17##EU832110|SPATA17|128153|spermatogenesis associated 17##EU832204|SPATA17|128153|spermatogenesis associated 17##NM_016052|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)	0.023573	
chr15	23894210	23894319	reg1030117.p1	4.541	+	NM_019066 TSC_hg19_v1_chr15_-_23893004	-1260	-	AK309383 TSC_hg19_v1_chr15_+_23810820 BC044639 BC013970 BC070293 EU446987 CU692226	-83396	+	NM_005664	-83811	+	AB464627 CU679085 TSC_hg19_v1_chr15_-_23932396	38116	-	TSC_hg19_v1_chr15_-_23932453 U35139 BC008750 AK312779 AK129654 NM_002487	38168	-	NM_018958	1026276	+	NM_019066|MAGEL2|54551|MAGE-like 2##BC044639|MKRN3|7681|makorin ring finger protein 3##BC070293|MKRN3|7681|makorin ring finger protein 3##EU446987|MKRN3|7681|makorin ring finger protein 3##NM_005664|MKRN3|7681|makorin ring finger protein 3##U35139|NDN|4692|necdin homolog (mouse)##BC008750|NDN|4692|necdin homolog (mouse)##AK312779|NDN|4692|necdin homolog (mouse)##AK129654|NDN|4692|necdin homolog (mouse)##NM_002487|NDN|4692|necdin homolog (mouse)##NM_018958|C15orf2|23742|chromosome 15 open reading frame 2	0.97497	CTCF.p2:-6:0.975
chr22	39496239	39496391	reg1030467.p2	4.541	+	NM_001166002 NM_001166003 NM_001166004 NM_181773 BC069023 CR456481	-3045	+	AK092614 NM_021822 AK315650 BC061914 AF182420 CR456472 BC009683 BC024268 AB266487 AB462950 CU013022 CU013310 CU692904 JF262036	-23128	+	AK294810 NM_001006666 NM_145298	-59675	+	TSC_hg19_v1_chr22_-_39529023 BC128418	32732	-	DQ064603 AB528611 EU446785 CU690844 BC051773 TSC_hg19_v1_chr22_-_39548584 NM_175709 AK124408	52252	-	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	140594	-	NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##AK092614|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_021822|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK315650|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC061914|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AF182420|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CR456472|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC009683|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC024268|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AB266487|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013022|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013310|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##JF262036|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK294810|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_001006666|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_145298|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##BC128418|CBX7|23492|chromobox homolog 7##DQ064603|CBX7|23492|chromobox homolog 7##EU446785|CBX7|23492|chromobox homolog 7##BC051773|CBX7|23492|chromobox homolog 7##NM_175709|CBX7|23492|chromobox homolog 7##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide	0.0	
chr9	19028819	19028973	reg1007786.p1	4.541	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	-554713	+	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	-554808	+	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	-1449800	+	BC033489 AK292245 AK057474 NM_153707	4323	-	TSC_hg19_v1_chr9_+_19049372 NM_006570	20467	+	TSC_hg19_v1_chr9_+_19049391 BC009990	20495	+	AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##BC033489|FAM154A|158297|family with sequence similarity 154, member A##AK292245|FAM154A|158297|family with sequence similarity 154, member A##AK057474|FAM154A|158297|family with sequence similarity 154, member A##NM_153707|FAM154A|158297|family with sequence similarity 154, member A##NM_006570|RRAGA|10670|Ras-related GTP binding A##BC009990|RRAGA|10670|Ras-related GTP binding A	0.0	
chr10	98048104	98048285	reg1028701.p3	4.540	+	AM180327 AM180328 AM180329 AM180330 AM180331 AM180332 AM180333 AM180334 AM180335 AM180336 AM180337 AM180338 AM180339 AM180340 AM180341 AM180342 AM180343 AM180344 AM180345 AM180346 BC018906 BC110298 AK027779 AF068180 AF068181 AK225546 NM_001114094 NM_013314	-16951	-	BC109045 BC109046 TSC_hg19_v1_chr10_+_97889812 AK095317 BC030967	-158452	+	TSC_hg19_v1_chr10_+_97889471 CR627437 NM_014803 BC011627	-158698	+	NM_001017520 NM_004088 AB046378 AK313615 M26144 BC012920 AK223317 DQ891465 DQ894645	15974	+	AF367761 NM_001040102 NM_001040103 NM_033207	70880	-	AB384048 BC113577 BC112341 BC112366 AB023149 BC013871 BC030548 TSC_hg19_v1_chr10_-_98273674 AK026106 NM_012465	225369	-	AM180327|BLNK|29760|B-cell linker##AM180328|BLNK|29760|B-cell linker##AM180329|BLNK|29760|B-cell linker##AM180330|BLNK|29760|B-cell linker##AM180331|BLNK|29760|B-cell linker##AM180332|BLNK|29760|B-cell linker##AM180333|BLNK|29760|B-cell linker##AM180334|BLNK|29760|B-cell linker##AM180335|BLNK|29760|B-cell linker##AM180336|BLNK|29760|B-cell linker##AM180337|BLNK|29760|B-cell linker##AM180338|BLNK|29760|B-cell linker##AM180339|BLNK|29760|B-cell linker##AM180340|BLNK|29760|B-cell linker##AM180341|BLNK|29760|B-cell linker##AM180342|BLNK|29760|B-cell linker##AM180343|BLNK|29760|B-cell linker##AM180344|BLNK|29760|B-cell linker##AM180345|BLNK|29760|B-cell linker##AM180346|BLNK|29760|B-cell linker##BC018906|BLNK|29760|B-cell linker##BC110298|BLNK|29760|B-cell linker##AK027779|BLNK|29760|B-cell linker##AF068180|BLNK|29760|B-cell linker##AF068181|BLNK|29760|B-cell linker##AK225546|BLNK|29760|B-cell linker##NM_001114094|BLNK|29760|B-cell linker##NM_013314|BLNK|29760|B-cell linker##BC109045|ZNF518A|9849|zinc finger protein 518A##BC109046|ZNF518A|9849|zinc finger protein 518A##BC030967|ZNF518A|9849|zinc finger protein 518A##CR627437|ZNF518A|9849|zinc finger protein 518A##NM_014803|ZNF518A|9849|zinc finger protein 518A##NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal##NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal##AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal##AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal##M26144|DNTT|1791|deoxynucleotidyltransferase, terminal##BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal##AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal##AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##BC113577|TLL2|7093|tolloid-like 2##BC112341|TLL2|7093|tolloid-like 2##BC112366|TLL2|7093|tolloid-like 2##AB023149|TLL2|7093|tolloid-like 2##BC013871|TLL2|7093|tolloid-like 2##BC030548|TLL2|7093|tolloid-like 2##AK026106|TLL2|7093|tolloid-like 2##NM_012465|TLL2|7093|tolloid-like 2	0.0	
chr12	125399420	125399601	reg1025463.p3	4.540	+	AY732488 AY819759 BC008955 BC080583 AB209782 BC000449 AK056939 AK098827 AK129749 AK291539 BC039193 BC093445 AB009010 TSC_hg19_v1_chr12_-_125399197 AK026846	-337	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	-51037	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	-51133	-	NM_021009	76	-	TSC_hg19_v1_chr12_-_125473644 BC037964 NM_032656	74134	-	TSC_hg19_v1_chr12_+_125478217 NM_080626 BC034525	78680	+	AY732488|UBC|7316|ubiquitin C##AY819759|UBC|7316|ubiquitin C##BC008955|UBC|7316|ubiquitin C##BC080583|UBC|7316|ubiquitin C##AB209782|UBC|7316|ubiquitin C##BC000449|UBC|7316|ubiquitin C##AK056939|UBC|7316|ubiquitin C##AK098827|UBC|7316|ubiquitin C##AK129749|UBC|7316|ubiquitin C##AK291539|UBC|7316|ubiquitin C##BC039193|UBC|7316|ubiquitin C##BC093445|UBC|7316|ubiquitin C##AB009010|UBC|7316|ubiquitin C##AK026846|UBC|7316|ubiquitin C##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##NM_021009|UBC|7316|ubiquitin C##BC037964|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37##NM_032656|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37##NM_080626|BRI3BP|140707|BRI3 binding protein##BC034525|BRI3BP|140707|BRI3 binding protein	0.0	
chr14	64460897	64461027	reg1030323.p2	4.540	+	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	-141267	+	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	-266213	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	-352400	-	NM_182913 AY061758 AK297874	219915	+	NM_182910	221709	+	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	288701	-	NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)	0.753187	CTCF.p2:-4:0.753
chr16	21113445	21113546	reg1028869.p1	4.540	+	TSC_hg19_v1_chr16_+_20912407 BC017039	-201087	+	AK311415 NM_001128301 NM_001128302 TSC_hg19_v1_chr16_+_20912121 AK311881	-201374	+	BX648998 NM_173475 TSC_hg19_v1_chr16_-_20911681 BC040442 BX648185	-201845	-	NM_020422 TSC_hg19_v1_chr16_+_21169994 AK074667 AK293557 BC015812	56487	+	AF494040 NM_017539	57266	-	BC096304 BC096305 BC096306 BC096307 M90366 NM_003460 AK313003 AK293805 AK308820	109385	-	BC017039|LYRM1|57149|LYR motif containing 1##AK311415|LYRM1|57149|LYR motif containing 1##NM_001128301|LYRM1|57149|LYR motif containing 1##NM_001128302|LYRM1|57149|LYR motif containing 1##AK311881|LYRM1|57149|LYR motif containing 1##BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_020422|TMEM159|57146|transmembrane protein 159##AK074667|TMEM159|57146|transmembrane protein 159##AK293557|TMEM159|57146|transmembrane protein 159##BC015812|TMEM159|57146|transmembrane protein 159##AF494040|DNAH3|55567|dynein, axonemal, heavy chain 3##NM_017539|DNAH3|55567|dynein, axonemal, heavy chain 3##BC096304|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096305|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096306|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##BC096307|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##M90366|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##NM_003460|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK313003|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK293805|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)##AK308820|ZP2|7783|zona pellucida glycoprotein 2 (sperm receptor)	0.992943	CTCF.p2:8:0.982
chr5	145267676	145267774	reg1031440.p1	4.540	+	NM_001080516	-15195	-	TSC_hg19_v1_chr5_-_145214906 BC028175 AK095695 AK125215 NM_182960 NM_205846 BC012033 NM_138492	-52837	-	AK292477 CR749266 NM_020768	-1717310	+	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	48446	+	TSC_hg19_v1_chr5_+_145317317 AL833297	49643	+	HQ258084 BC130586 BC130588 BC144387 BC144388 BC144389 BC144392 NM_001029869	216186	-	NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##BC028175|PRELID2|153768|PRELI domain containing 2##AK095695|PRELID2|153768|PRELI domain containing 2##AK125215|PRELID2|153768|PRELI domain containing 2##NM_182960|PRELID2|153768|PRELI domain containing 2##NM_205846|PRELID2|153768|PRELI domain containing 2##BC012033|PRELID2|153768|PRELI domain containing 2##NM_138492|PRELID2|153768|PRELI domain containing 2##AK292477|KCTD16|57528|potassium channel tetramerisation domain containing 16##CR749266|KCTD16|57528|potassium channel tetramerisation domain containing 16##NM_020768|KCTD16|57528|potassium channel tetramerisation domain containing 16##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2##AL833297|SH3RF2|153769|SH3 domain containing ring finger 2##HQ258084|PLAC8L1|153770|PLAC8-like 1##BC130586|PLAC8L1|153770|PLAC8-like 1##BC130588|PLAC8L1|153770|PLAC8-like 1##BC144387|PLAC8L1|153770|PLAC8-like 1##BC144388|PLAC8L1|153770|PLAC8-like 1##BC144389|PLAC8L1|153770|PLAC8-like 1##BC144392|PLAC8L1|153770|PLAC8-like 1##NM_001029869|PLAC8L1|153770|PLAC8-like 1	0.891768	CTCF.p2:9:0.892
chrX	68378417	68378538	reg1030286.p1	4.540	+	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	-329622	+	TSC_hg19_v1_chrX_+_67913490 D80011	-464986	+	TSC_hg19_v1_chrX_+_67913480 AK291747 NM_001142504	-464997	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	6829	-	AF087142 NM_015686 BC136518 BC136519	346606	+	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	457458	+	BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK291747|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142504|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B##AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A	0.234535	CTCF.p2:-5:0.235
chr12	124423408	124423487	reg1029377.p1	4.539	+	NM_207437	-176406	+	TSC_hg19_v1_chr12_+_124196946 AK289391 AF112972 HQ258004	-226421	+	TSC_hg19_v1_chr12_+_124196899 BC022300	-226551	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	33752	-	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	34282	+	AK126577 NM_181709	350262	+	NM_207437|DNAH10|196385|dynein, axonemal, heavy chain 10##AK289391|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##AF112972|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##HQ258004|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##BC022300|ATP6V0A2|23545|ATPase, H+ transporting, lysosomal V0 subunit a2##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A	0.0	
chr16	6734190	6734326	reg1034694.p1	4.539	+	TSC_hg19_v1_chr16_+_6533765 BC033885	-200483	+	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	-665033	+	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	-1586490	-	AK001027 NM_001142334	89551	+	AF094849 AF109106 AF229057 NM_145891 NM_145892 NM_145893	648492	+	TSC_hg19_v1_chr16_+_8715563 NM_024109 AK315383 BC001908 AK022495	1981282	+	BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_024109|METTL22|79091|methyltransferase like 22##AK315383|METTL22|79091|methyltransferase like 22##BC001908|METTL22|79091|methyltransferase like 22##AK022495|METTL22|79091|methyltransferase like 22	0.999462	CTCF.p2:4:0.999
chr16	68118619	68118732	reg1026325.p2	4.539	+	NM_018380	-60906	-	AK290578 TSC_hg19_v1_chr16_+_68057186 AB101210 AK296663 AK000406 BC006527 NM_017803	-61500	+	TSC_hg19_v1_chr16_-_68057129 BC014517	-61547	-	TSC_hg19_v1_chr16_+_68119279 NM_004555 NM_173163 NM_173165	579	+	TSC_hg19_v1_chr16_+_68119335 AB209824	663	+	TSC_hg19_v1_chr16_+_68119350 L41067	694	+	NM_018380|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##AK290578|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AB101210|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK296663|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK000406|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC006527|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##NM_017803|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC014517|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##NM_004555|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173163|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173165|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##AB209824|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##L41067|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	0.452194	CTCF.p2:97:0.434
chr18	5975479	5975659	reg1027820.p2	4.539	+	NM_001080209	-83467	-	TSC_hg19_v1_chr18_-_5630663 BC008377	-344922	-	AF069072 AB023204 NM_012307 TSC_hg19_v1_chr18_-_5543997 AK128531	-431581	-	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	439346	-	NM_001243517	535845	+	NM_001010000 BX648684 AK308259 AK302026	858896	+	NM_001080209|TMEM200C|645369|transmembrane protein 200C##BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AF069072|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AB023204|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_012307|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AK128531|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28	0.429418	CTCF.p2:-71:0.429
chr19	42257982	42258102	reg1018458.p3	4.539	+	M16234 TSC_hg19_v1_chr19_+_42221424	-36624	+	TSC_hg19_v1_chr19_+_42212619 CR749337 DQ890840 DQ896753 CU689928 M15042 X16455	-45406	+	TSC_hg19_v1_chr19_+_42212544 M29540 AK310844 BC034671 AK223101	-45491	+	NM_002483 TSC_hg19_v1_chr19_+_42259437 AK312542 M29541 M18728 M18216 BC005008 BT009774	1429	+	AK298694 NM_001815 D90277 D90278 L00692 L00693 BC106728	42510	+	AY358726 NM_173506	90465	-	M16234|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##CR749337|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ890840|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ896753|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M15042|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##X16455|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M29540|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK310844|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##BC034671|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK223101|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##NM_002483|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##AK312542|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M29541|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18728|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18216|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BC005008|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BT009774|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##NM_001815|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90277|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90278|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00692|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00693|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##BC106728|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##AY358726|LYPD4|147719|LY6/PLAUR domain containing 4##NM_173506|LYPD4|147719|LY6/PLAUR domain containing 4	0.992915	CTCF.p2:2:0.965
chrX	56829016	56829196	reg1004127.p1	4.539	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-73415	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-239055	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-570196	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	192865	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	318822	-	BC071694 NM_019003	334951	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.0	
chr11	2171540	2171654	reg1031758.p1	4.538	+	TSC_hg19_v1_chr11_-_2170792 DQ104203 NM_001007139	-785	-	NM_001127598 TSC_hg19_v1_chr11_-_2162493	-9136	-	TSC_hg19_v1_chr11_-_2162174 HM481219 HM481220	-9397	-	AY899304 X70508 BC005255 DQ104204 DQ104205 NM_000207 NM_001042376 NM_001185097 NM_001185098	10826	-	M20911 M20912 AB591012 DQ677336 DQ677337 M17589 Y00414 M24790 NM_000360 NM_199292 NM_199293 X05290 BC143611 BC104967 BC143614	21463	-	TSC_hg19_v1_chr11_-_2291819 BC057801 BC136561 BC136567	120260	-	DQ104203|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##NM_001007139|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##NM_001127598|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##HM481219|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##HM481220|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##AY899304|INS|3630|insulin##X70508|INS|3630|insulin##BC005255|INS|3630|insulin##DQ104204|INS-IGF2|723961|INS-IGF2 readthrough##DQ104205|INS-IGF2|723961|INS-IGF2 readthrough##NM_000207|INS|3630|insulin##NM_001042376|INS-IGF2|723961|INS-IGF2 readthrough##NM_001185097|INS|3630|insulin##NM_001185098|INS|3630|insulin##M20911|TH|7054|tyrosine hydroxylase##M20912|TH|7054|tyrosine hydroxylase##DQ677336|TH|7054|tyrosine hydroxylase##DQ677337|TH|7054|tyrosine hydroxylase##M17589|TH|7054|tyrosine hydroxylase##Y00414|TH|7054|tyrosine hydroxylase##M24790|TH|7054|tyrosine hydroxylase##NM_000360|TH|7054|tyrosine hydroxylase##NM_199292|TH|7054|tyrosine hydroxylase##NM_199293|TH|7054|tyrosine hydroxylase##X05290|TH|7054|tyrosine hydroxylase##BC143611|TH|7054|tyrosine hydroxylase##BC104967|TH|7054|tyrosine hydroxylase##BC143614|TH|7054|tyrosine hydroxylase##BC057801|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136561|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136567|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)	0.0	
chr1	25355830	25355965	reg1027812.p2	4.538	+	BC013362 AK310945 NM_001031680 AF022726	-64355	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-99111	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-99158	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	203090	-	BC065040 TSC_hg19_v1_chr1_-_25573922	218026	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	218076	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.01838	
chr15	59664446	59664626	reg1024926.p1	4.538	+	AY642121 BC022034 AY009108 NM_033195 AK312777 AK058192	-165484	+	TSC_hg19_v1_chr15_+_59397344 NM_004701 AK001404 AL080146 BC105086 BC105112 AF087910 AK222611 AB020981 AF002822 AB587333 AM393577 BT019458 CR533527	-267165	+	TSC_hg19_v1_chr15_+_59359061 AK095327	-305458	+	AB290177 TSC_hg19_v1_chr15_-_59665055	518	-	TSC_hg19_v1_chr15_-_59665065 AK291688	530	-	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	534	-	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B##BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_004701|CCNB2|9133|cyclin B2##AK001404|CCNB2|9133|cyclin B2##AL080146|CCNB2|9133|cyclin B2##BC105086|CCNB2|9133|cyclin B2##BC105112|CCNB2|9133|cyclin B2##AF087910|CCNB2|9133|cyclin B2##AK222611|CCNB2|9133|cyclin B2##AB020981|CCNB2|9133|cyclin B2##AF002822|CCNB2|9133|cyclin B2##AM393577|CCNB2|9133|cyclin B2##BT019458|CCNB2|9133|cyclin B2##CR533527|CCNB2|9133|cyclin B2##AK095327|RNF111|54778|ring finger protein 111##AB290177|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE	0.0	
chr21	42493846	42493974	reg1031119.p1	4.538	+	AF023450 NM_001389 AF217525	-274859	-	AB384859 AB209136 TSC_hg19_v1_chr21_-_42218650	-275292	-	NM_006198 U52969 AK289964 BC013791 X93349 AF416716 AM183336	-1254533	+	AF178532 AF188276 AF188277 NM_012105 NM_138991 NM_138992	45817	+	AK075539 AK292056 AF050171 TSC_hg19_v1_chr21_+_42540086	46160	+	TSC_hg19_v1_chr21_+_42540092 AY358927 AF117892 BC014453 AF204944 AF200192 AB590241 DQ895416 EU176330 AF200342	46231	+	AF023450|DSCAM|1826|Down syndrome cell adhesion molecule##NM_001389|DSCAM|1826|Down syndrome cell adhesion molecule##AF217525|DSCAM|1826|Down syndrome cell adhesion molecule##AB209136|DSCAM|1826|Down syndrome cell adhesion molecule##NM_006198|PCP4|5121|Purkinje cell protein 4##U52969|PCP4|5121|Purkinje cell protein 4##AK289964|PCP4|5121|Purkinje cell protein 4##BC013791|PCP4|5121|Purkinje cell protein 4##X93349|PCP4|5121|Purkinje cell protein 4##AF416716|PCP4|5121|Purkinje cell protein 4##AM183336|PCP4|5121|Purkinje cell protein 4##AF178532|BACE2|25825|beta-site APP-cleaving enzyme 2##AF188276|BACE2|25825|beta-site APP-cleaving enzyme 2##AF188277|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_012105|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_138991|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_138992|BACE2|25825|beta-site APP-cleaving enzyme 2##AK075539|BACE2|25825|beta-site APP-cleaving enzyme 2##AK292056|BACE2|25825|beta-site APP-cleaving enzyme 2##AF050171|BACE2|25825|beta-site APP-cleaving enzyme 2##AY358927|BACE2|25825|beta-site APP-cleaving enzyme 2##AF117892|BACE2|25825|beta-site APP-cleaving enzyme 2##BC014453|BACE2|25825|beta-site APP-cleaving enzyme 2##AF204944|BACE2|25825|beta-site APP-cleaving enzyme 2##AF200192|BACE2|25825|beta-site APP-cleaving enzyme 2##DQ895416|BACE2|25825|beta-site APP-cleaving enzyme 2##EU176330|BACE2|25825|beta-site APP-cleaving enzyme 2##AF200342|BACE2|25825|beta-site APP-cleaving enzyme 2	0.997579	CTCF.p2:11:0.998
chr2	220144606	220144775	reg1026142.p2	4.538	+	TSC_hg19_v1_chr2_+_220144087 AK312723 NM_001039550 NM_006736 AK293888 BC011609 BC040494 AK292761 AK289626	-543	+	BC009238 TSC_hg19_v1_chr2_-_220118641 AK054731 NM_006000	-26063	-	TSC_hg19_v1_chr2_+_220110219 AK292694 NM_001008910 AK310793 AK298471 AK225526 AF060798 BC002618 AF203910 AK225392 BC053998 AK096954 AK302182	-34483	+	TSC_hg19_v1_chr2_-_220173693 AK296335 NM_001199764	29020	-	AK314574 TSC_hg19_v1_chr2_-_220174093 AK294490 BC070053 L18983	29413	-	TSC_hg19_v1_chr2_-_220174202 AK291469 NM_001199763 NM_002846	29557	-	AK312723|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##NM_001039550|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##NM_006736|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK293888|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##BC011609|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##BC040494|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK292761|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##AK289626|DNAJB2|3300|DnaJ (Hsp40) homolog, subfamily B, member 2##BC009238|TUBA4A|7277|tubulin, alpha 4a##AK054731|TUBA4A|7277|tubulin, alpha 4a##NM_006000|TUBA4A|7277|tubulin, alpha 4a##AK292694|STK16|8576|serine/threonine kinase 16##NM_001008910|STK16|8576|serine/threonine kinase 16##AK310793|STK16|8576|serine/threonine kinase 16##AK298471|STK16|8576|serine/threonine kinase 16##AK225526|STK16|8576|serine/threonine kinase 16##AF060798|STK16|8576|serine/threonine kinase 16##BC002618|STK16|8576|serine/threonine kinase 16##AF203910|STK16|8576|serine/threonine kinase 16##AK225392|STK16|8576|serine/threonine kinase 16##BC053998|STK16|8576|serine/threonine kinase 16##AK096954|STK16|8576|serine/threonine kinase 16##AK302182|STK16|8576|serine/threonine kinase 16##AK296335|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##NM_001199764|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK314574|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK294490|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##BC070053|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##L18983|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##AK291469|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##NM_001199763|PTPRN|5798|protein tyrosine phosphatase, receptor type, N##NM_002846|PTPRN|5798|protein tyrosine phosphatase, receptor type, N	0.590616	CTCF.p2:-15:0.201	CTCF.p2:68:0.377
chr5	127211307	127211420	reg1026782.p1	4.538	+	NM_001127385 AB219832 BC071790	-222638	+	NM_001048252 AB219764	-226640	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	-352169	+	TSC_hg19_v1_chr5_-_127418765 AF088062 BX648677 BC036629	207400	-	AK090949 AX746698 TSC_hg19_v1_chr5_-_127419417	207996	-	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	208110	+	NM_001127385|CTXN3|613212|cortexin 3##AB219832|CTXN3|613212|cortexin 3##BC071790|CTXN3|613212|cortexin 3##NM_001048252|CTXN3|613212|cortexin 3##AB219764|CTXN3|613212|cortexin 3##AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1##AF088062|FLJ33630|644873|uncharacterized LOC644873##BX648677|FLJ33630|644873|uncharacterized LOC644873##BC036629|FLJ33630|644873|uncharacterized LOC644873##AK090949|FLJ33630|644873|uncharacterized LOC644873##AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2	0.161032	
chr5	142415916	142416096	reg1026448.p2	4.538	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-265698	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-266034	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-338435	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	366817	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	367100	-	BC015610 TSC_hg19_v1_chr5_-_142783214	367205	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.292573	CTCF.p2:9:0.293
chr6	11822669	11822819	reg1025653.p1	4.538	+	NM_001143948 NM_032744	-43465	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-284246	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-440204	-	NM_002114	189979	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	467849	+	TSC_hg19_v1_chr6_+_12514301 D28417	691558	+	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.017829	
chr6	137144020	137144122	reg1028534.p1	4.538	+	TSC_hg19_v1_chr6_+_137143749 U76560 BC006268 AB529018 CR542054 CR542076 CU675317 CU689196	-296	+	TSC_hg19_v1_chr6_+_137143699 NM_000288 BC031606 U88871	-369	+	TSC_hg19_v1_chr6_-_137113721 AB209093	-30329	-	AK316095 BC087842 NM_001008783 AK295424	99382	+	TSC_hg19_v1_chr6_-_137365811 AY358883 HQ258452	221767	-	AF184971 AK315293 BC113574 BC113602 NM_014432 AK307072	222174	-	U76560|PEX7|5191|peroxisomal biogenesis factor 7##BC006268|PEX7|5191|peroxisomal biogenesis factor 7##CR542054|PEX7|5191|peroxisomal biogenesis factor 7##CR542076|PEX7|5191|peroxisomal biogenesis factor 7##NM_000288|PEX7|5191|peroxisomal biogenesis factor 7##BC031606|PEX7|5191|peroxisomal biogenesis factor 7##U88871|PEX7|5191|peroxisomal biogenesis factor 7##AB209093|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3##AY358883|IL20RA|53832|interleukin 20 receptor, alpha##HQ258452|IL20RA|53832|interleukin 20 receptor, alpha##AF184971|IL20RA|53832|interleukin 20 receptor, alpha##AK315293|IL20RA|53832|interleukin 20 receptor, alpha##BC113574|IL20RA|53832|interleukin 20 receptor, alpha##BC113602|IL20RA|53832|interleukin 20 receptor, alpha##NM_014432|IL20RA|53832|interleukin 20 receptor, alpha##AK307072|IL20RA|53832|interleukin 20 receptor, alpha	0.673786	CTCF.p2:-12:0.674
chr6	96537186	96537302	reg1032815.p2	4.538	+	NM_006581 AK314966 TSC_hg19_v1_chr6_+_96463867 BC001879 BC036101 AB023021	-73377	+	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	-511843	+	TSC_hg19_v1_chr6_-_96025325 BC047582	-511955	-	TSC_hg19_v1_chr6_+_96969716 NM_015323 BC015377 AK307651 BC036379 BC028608	432455	+	TSC_hg19_v1_chr6_+_96969734 AB018319 CU690338	432495	+	NM_001170807 NM_020482 AK058175 BC029490 BC021723 AK223539	473225	+	NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha##NM_015323|UFL1|23376|UFM1-specific ligase 1##BC015377|UFL1|23376|UFM1-specific ligase 1##AK307651|UFL1|23376|UFM1-specific ligase 1##BC036379|UFL1|23376|UFM1-specific ligase 1##BC028608|UFL1|23376|UFM1-specific ligase 1##AB018319|UFL1|23376|UFM1-specific ligase 1##NM_001170807|FHL5|9457|four and a half LIM domains 5##NM_020482|FHL5|9457|four and a half LIM domains 5##AK058175|FHL5|9457|four and a half LIM domains 5##BC029490|FHL5|9457|four and a half LIM domains 5##BC021723|FHL5|9457|four and a half LIM domains 5##AK223539|FHL5|9457|four and a half LIM domains 5	0.387293	CTCF.p2:0:0.387
chr11	61250128	61250232	reg1030702.p1	4.537	+	NM_001170753 NM_145017 TSC_hg19_v1_chr11_+_61248591 AK057333 BC043246 JF442033	-1562	+	TSC_hg19_v1_chr11_+_61197595 BX648946 AK000494 NM_017841 BC002331	-52586	+	TSC_hg19_v1_chr11_-_61197468 NM_001136040 NM_001142565	-52715	-	NM_001145077	26091	+	TSC_hg19_v1_chr11_-_61348549 BC125170 BC125171 NM_001252065 NM_004200	98347	-	TSC_hg19_v1_chr11_+_61447896 BC150176 BC150195 NM_006133 AB014559 BC152453	197701	+	NM_001170753|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##NM_145017|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##AK057333|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##BC043246|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##JF442033|PPP1R32|220004|protein phosphatase 1, regulatory subunit 32##AK000494|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##NM_017841|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##BC002331|SDHAF2|54949|succinate dehydrogenase complex assembly factor 2##NM_001136040|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##NM_001142565|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B##BC125170|SYT7|9066|synaptotagmin VII##BC125171|SYT7|9066|synaptotagmin VII##NM_001252065|SYT7|9066|synaptotagmin VII##NM_004200|SYT7|9066|synaptotagmin VII##BC150176|DAGLA|747|diacylglycerol lipase, alpha##BC150195|DAGLA|747|diacylglycerol lipase, alpha##NM_006133|DAGLA|747|diacylglycerol lipase, alpha##AB014559|DAGLA|747|diacylglycerol lipase, alpha##BC152453|DAGLA|747|diacylglycerol lipase, alpha	0.99191	CTCF.p2:0:0.992
chr13	38444545	38444654	reg1034033.p1	4.537	+	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	-701	-	EU262883 EU262884 EU262885 EU262886 AY140646 AY918092 BC106709 BC106710 D13666 GU354210 D13665 TSC_hg19_v1_chr13_-_38172906 NM_001135934 NM_001135935 NM_001135936 NM_006475	-271678	-	BC028723 NM_145203	-764799	-	NM_016617 TSC_hg19_v1_chr13_+_38923946	479352	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	479450	+	NM_207361	816573	+	BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##EU262883|POSTN|10631|periostin, osteoblast specific factor##EU262884|POSTN|10631|periostin, osteoblast specific factor##EU262885|POSTN|10631|periostin, osteoblast specific factor##EU262886|POSTN|10631|periostin, osteoblast specific factor##AY140646|POSTN|10631|periostin, osteoblast specific factor##AY918092|POSTN|10631|periostin, osteoblast specific factor##BC106709|POSTN|10631|periostin, osteoblast specific factor##BC106710|POSTN|10631|periostin, osteoblast specific factor##D13666|POSTN|10631|periostin, osteoblast specific factor##GU354210|POSTN|10631|periostin, osteoblast specific factor##D13665|POSTN|10631|periostin, osteoblast specific factor##NM_001135934|POSTN|10631|periostin, osteoblast specific factor##NM_001135935|POSTN|10631|periostin, osteoblast specific factor##NM_001135936|POSTN|10631|periostin, osteoblast specific factor##NM_006475|POSTN|10631|periostin, osteoblast specific factor##BC028723|CSNK1A1L|122011|casein kinase 1, alpha 1-like##NM_145203|CSNK1A1L|122011|casein kinase 1, alpha 1-like##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1##NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2	0.223703	CTCF.p2:-13:0.224
chr15	65677249	65677417	reg1002399.p1	4.537	+	BC042054 TSC_hg19_v1_chr15_-_65670341 BC067107 NM_004884	-6982	-	BC006389 NM_017851 TSC_hg19_v1_chr15_-_65579223 AK000516	-98173	-	BC035776 AF035408 AY358904 AK225652 AK225926 AK313352 TSC_hg19_v1_chr15_-_65503811 NM_003613	-173521	-	TSC_hg19_v1_chr15_-_65715258 AB529157	37912	-	TSC_hg19_v1_chr15_-_65715412 AB052622 NM_020962	38068	-	AY354202 BC040203 NM_197960 AK302638	132274	-	BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC006389|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##NM_017851|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##AK000516|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##BC035776|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AF035408|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AY358904|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225652|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225926|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK313352|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##NM_003613|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AB052622|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##NM_020962|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##AY354202|DPP8|54878|dipeptidyl-peptidase 8##BC040203|DPP8|54878|dipeptidyl-peptidase 8##NM_197960|DPP8|54878|dipeptidyl-peptidase 8##AK302638|DPP8|54878|dipeptidyl-peptidase 8	0.998804	CTCF.p2:13:0.999
chr20	62289842	62289992	reg1022791.p2	4.537	+	TSC_hg19_v1_chr20_+_62289667 AK302508 AK304798 AK299332 BC000673	-236	+	AF217795 NM_016434 NM_032957	-755	+	DQ893121 DQ896397 BC047671 BC021084 BC032527 AF069709 BC056873 TSC_hg19_v1_chr20_-_62284781 AK074860 NM_015894 AK310010 BC009381 BC025234	-5157	-	TSC_hg19_v1_chr20_+_62321100 AL080127	31231	+	TSC_hg19_v1_chr20_+_62328005 NM_003823 AF104419 AY358279 BC017065	38094	+	AF217794 TSC_hg19_v1_chr20_+_62328078 AY124378 AY124379 AB590899 AF134240	38177	+	AK302508|RTEL1|51750|regulator of telomere elongation helicase 1##AK304798|RTEL1|51750|regulator of telomere elongation helicase 1##AK299332|RTEL1|51750|regulator of telomere elongation helicase 1##AF217795|RTEL1|51750|regulator of telomere elongation helicase 1##NM_016434|RTEL1|51750|regulator of telomere elongation helicase 1##NM_032957|RTEL1|51750|regulator of telomere elongation helicase 1##DQ893121|STMN3|50861|stathmin-like 3##DQ896397|STMN3|50861|stathmin-like 3##BC047671|STMN3|50861|stathmin-like 3##BC032527|STMN3|50861|stathmin-like 3##AF069709|STMN3|50861|stathmin-like 3##BC056873|STMN3|50861|stathmin-like 3##AK074860|STMN3|50861|stathmin-like 3##NM_015894|STMN3|50861|stathmin-like 3##AK310010|STMN3|50861|stathmin-like 3##BC009381|STMN3|50861|stathmin-like 3##BC025234|STMN3|50861|stathmin-like 3##AL080127|RTEL1|51750|regulator of telomere elongation helicase 1##NM_003823|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AF104419|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AY358279|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##BC017065|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AF134240|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	0.0	
chr22	42815493	42815670	reg1031442.p1	4.537	+	BC038245 TSC_hg19_v1_chr22_-_42765218	-50379	-	AB527391 NM_005650 NM_181492	-204204	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	-288700	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	12800	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	100186	-	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	100233	-	NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)	0.0	
chr2	7567852	7568032	reg1003706.p2	4.537	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-510355	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-550079	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-561239	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1254261	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1409777	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1575879	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.020588	
chr5	94120111	94120187	reg1024008.p1	4.537	+	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	-165776	+	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	-165892	-	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	-672829	-	AK025997 TSC_hg19_v1_chr5_-_94224607	104457	-	AY656716 AK058012 BC030005 AK057694 TSC_hg19_v1_chr5_-_94417350	297119	-	NM_001002796	297395	-	BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1##AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1##BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1##AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_001002796|MCTP1|79772|multiple C2 domains, transmembrane 1	0.0	
chr9	114757197	114757377	reg1026684.p2	4.537	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-97820	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-98173	+	AL833535 NM_173521	-211512	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	180233	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	338000	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	338562	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chrX	118772723	118772863	reg1022124.p1	4.537	+	BC047878 BC068514 BC040379 AY208891 NM_001173487 NM_017544	-32965	-	EF165090 EF165091 EF165093 AJ011812 EF158333 EF216688 EF216689 NM_001173488	-45811	-	BC042021 NM_181777	-58496	+	D50918 AB384441 CU679289 CU680116 CU690318 TSC_hg19_v1_chrX_-_118827108 BC069231	54292	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	54339	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	54386	-	BC047878|NKRF|55922|NFKB repressing factor##BC068514|NKRF|55922|NFKB repressing factor##BC040379|NKRF|55922|NFKB repressing factor##AY208891|NKRF|55922|NFKB repressing factor##NM_001173487|NKRF|55922|NFKB repressing factor##NM_017544|NKRF|55922|NFKB repressing factor##EF165090|NKRF|55922|NFKB repressing factor##EF165091|NKRF|55922|NFKB repressing factor##EF165093|NKRF|55922|NFKB repressing factor##AJ011812|NKRF|55922|NFKB repressing factor##EF158333|NKRF|55922|NFKB repressing factor##EF216688|NKRF|55922|NFKB repressing factor##EF216689|NKRF|55922|NFKB repressing factor##NM_001173488|NKRF|55922|NFKB repressing factor##BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D50918|SEPT6|23157|septin 6##BC069231|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6	0.0	
chrX	63647781	63647961	reg1035823.p2	4.537	+	AK298847 NM_017677 TSC_hg19_v1_chrX_-_63615334	-32528	-	CU680314 TSC_hg19_v1_chrX_-_63615324 BC012399	-32587	-	AK096896 AK300684 NM_130388	-197373	-	TSC_hg19_v1_chrX_-_64139018 AK001547	491170	-	TSC_hg19_v1_chrX_-_64196331 AK022918 AK123763 AK315485 AK222708 AK293570 AF270491 BC004411 AB032992 NM_001178033 NM_018684	548478	-	AK022807 TSC_hg19_v1_chrX_-_64254616 NM_001178032 NM_001243804	606766	-	NM_017677|MTMR8|55613|myotubularin related protein 8##BC012399|MTMR8|55613|myotubularin related protein 8##AK096896|ASB12|142689|ankyrin repeat and SOCS box containing 12##AK300684|ASB12|142689|ankyrin repeat and SOCS box containing 12##NM_130388|ASB12|142689|ankyrin repeat and SOCS box containing 12##AK001547|ZC4H2|55906|zinc finger, C4H2 domain containing##AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing##AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing##AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing##AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing##AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing##AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing##BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing##AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing##AK022807|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001178032|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001243804|ZC4H2|55906|zinc finger, C4H2 domain containing	0.0	
chr11	64846875	64846958	reg1001111.p3	4.536	+	AB527189 TSC_hg19_v1_chr11_-_64826007 AJ012371 NM_005468 BC143643 BC143644	-20914	-	TSC_hg19_v1_chr11_+_64808404 BC007448 U79266	-38498	+	NM_013299 TSC_hg19_v1_chr11_+_64808377	-38535	+	DQ893251 DQ896580 TSC_hg19_v1_chr11_-_64851515 BC011000 AK291490	4584	-	TSC_hg19_v1_chr11_-_64851564 NM_080668	4669	-	TSC_hg19_v1_chr11_+_64851693 NM_006782 AF030291 AF001891 AK295279 AK316044 AK291964 AK308740	4790	+	AJ012371|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##NM_005468|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC143643|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC143644|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC007448|SAC3D1|29901|SAC3 domain containing 1##U79266|SAC3D1|29901|SAC3 domain containing 1##NM_013299|SAC3D1|29901|SAC3 domain containing 1##DQ893251|CDCA5|113130|cell division cycle associated 5##DQ896580|CDCA5|113130|cell division cycle associated 5##BC011000|CDCA5|113130|cell division cycle associated 5##AK291490|CDCA5|113130|cell division cycle associated 5##NM_080668|CDCA5|113130|cell division cycle associated 5##NM_006782|ZFPL1|7542|zinc finger protein-like 1##AF030291|ZFPL1|7542|zinc finger protein-like 1##AF001891|ZFPL1|7542|zinc finger protein-like 1##AK295279|ZFPL1|7542|zinc finger protein-like 1##AK316044|ZFPL1|7542|zinc finger protein-like 1##AK291964|ZFPL1|7542|zinc finger protein-like 1##AK308740|ZFPL1|7542|zinc finger protein-like 1	0.0	
chr1	246022451	246022563	reg1030322.p1	4.536	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-704199	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-888824	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-888877	+	AK024733 NM_022743	558204	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	648047	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	648101	-	AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3	0.203405	CTCF.p2:-13:0.203
chr14	55518041	55518222	reg1010895.p1	4.536	+	TSC_hg19_v1_chr14_+_55493974 NM_080867 NM_199421 BX161418 CR933659 BC060790 AK124083	-24202	+	TSC_hg19_v1_chr14_-_55493818 BC043349 NM_001008396 NM_007086	-24320	-	TSC_hg19_v1_chr14_-_55493780 BC000622 BC005040 AK293005 BC063041	-24346	-	TSC_hg19_v1_chr14_+_55518364 NM_144578 AK315501	209	+	TSC_hg19_v1_chr14_+_55518382 AL834285	246	+	AK025580 TSC_hg19_v1_chr14_+_55518408 BC015621	300	+	NM_080867|SOCS4|122809|suppressor of cytokine signaling 4##NM_199421|SOCS4|122809|suppressor of cytokine signaling 4##BX161418|SOCS4|122809|suppressor of cytokine signaling 4##CR933659|SOCS4|122809|suppressor of cytokine signaling 4##BC060790|SOCS4|122809|suppressor of cytokine signaling 4##AK124083|SOCS4|122809|suppressor of cytokine signaling 4##BC043349|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_001008396|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_007086|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC000622|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC005040|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##AK293005|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC063041|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_144578|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##AK315501|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##AL834285|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##AK025580|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##BC015621|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like	0.137001	
chr15	100036126	100036306	reg1026492.p1	4.536	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-244574	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-244800	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-246510	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	69937	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	69978	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	70019	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.0	
chr16	11327162	11327263	reg1027960.p2	4.536	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-288769	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-290977	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-291046	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	22838	-	X63758 BC096135 BC096136 BC096137 NM_005425	35926	-	NM_021247	40239	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr16	28152342	28152507	reg1025500.p1	4.536	+	TSC_hg19_v1_chr16_-_28074776 AY358206 NM_001109763	-77622	-	BC016460 NM_144675	-252947	-	TSC_hg19_v1_chr16_+_27561464 NM_015202 AB011128 BC150276 BC131508	-590960	+	AY026388 BC130304 BC144189 TSC_hg19_v1_chr16_-_28222816 AK123846	70361	-	TSC_hg19_v1_chr16_-_28223181 AB002368 NM_015171	70751	-	TSC_hg19_v1_chr16_-_28303389 AK091456 AX746995	150954	-	AY358206|GSG1L|146395|GSG1-like##NM_001109763|GSG1L|146395|GSG1-like##BC016460|GSG1L|146395|GSG1-like##NM_144675|GSG1L|146395|GSG1-like##NM_015202|KIAA0556|23247|KIAA0556##AB011128|KIAA0556|23247|KIAA0556##BC150276|KIAA0556|23247|KIAA0556##BC131508|KIAA0556|23247|KIAA0556##AY026388|XPO6|23214|exportin 6##BC130304|XPO6|23214|exportin 6##BC144189|XPO6|23214|exportin 6##AK123846|XPO6|23214|exportin 6##AB002368|XPO6|23214|exportin 6##NM_015171|XPO6|23214|exportin 6	0.0	
chr3	71702091	71702219	reg1031170.p2	4.536	+	TSC_hg19_v1_chr3_-_71632874 AK122710 NM_001244808 BC005055 BC054815 BC071893 BC080521 BC068481 NM_001012505 NM_001244810 NM_032682	-69177	-	AF250920 NM_001244816	-109448	-	TSC_hg19_v1_chr3_-_71542628 AF146696 BC054505	-159488	-	AK126999 TSC_hg19_v1_chr3_-_71774554 NM_001134651	72349	-	NM_001134650	76113	-	AB040799 HQ709187 NM_018971	101045	+	AK122710|FOXP1|27086|forkhead box P1##NM_001244808|FOXP1|27086|forkhead box P1##BC005055|FOXP1|27086|forkhead box P1##BC054815|FOXP1|27086|forkhead box P1##BC071893|FOXP1|27086|forkhead box P1##BC080521|FOXP1|27086|forkhead box P1##BC068481|FOXP1|27086|forkhead box P1##NM_001012505|FOXP1|27086|forkhead box P1##NM_001244810|FOXP1|27086|forkhead box P1##NM_032682|FOXP1|27086|forkhead box P1##AF250920|FOXP1|27086|forkhead box P1##NM_001244816|FOXP1|27086|forkhead box P1##AF146696|FOXP1|27086|forkhead box P1##BC054505|FOXP1|27086|forkhead box P1##AK126999|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134651|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134650|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##AB040799|GPR27|2850|G protein-coupled receptor 27##HQ709187|GPR27|2850|G protein-coupled receptor 27##NM_018971|GPR27|2850|G protein-coupled receptor 27	0.928083	CTCF.p2:15:0.928
chr4	139163448	139163628	reg1032534.p1	4.536	+	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	-174	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-709896	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-709946	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	773455	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	841865	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	842073	-	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.0	
chr1	190053745	190053870	reg1028257.p1	4.535	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-3255719	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-3404317	-	M33478 NM_002597	-3623580	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	392928	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	2073796	+	AY643711 NM_001039152	2232314	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.919913	CTCF.p2:47:0.920
chr13	29215655	29215811	reg1028736.p1	4.535	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	-146489	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	-503067	+	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	-541046	-	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	17475	+	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	17561	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	77322	-	BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3	0.0	
chr17	27054232	27054412	reg1002271.p2	4.535	+	NM_001160407	-374	-	EU831756 EU831834 TSC_hg19_v1_chr17_-_27053250 BC014072 NM_138463	-1134	-	TSC_hg19_v1_chr17_+_27047009 NM_000984 U43701 AK130965 AK312123 BC058041 U37230 BC014459 U02032	-7314	+	BC112240 BC113705 AK301429 AY242354 AY267371 HQ258347 NM_178170	1492	+	TSC_hg19_v1_chr17_+_27071025 NM_004295 BC001769 X80200 AK300804 AY937222 AY937223 AY937224 AY937225 AB529167 DQ892825 DQ896071 CU674876 AF082185	16747	+	TSC_hg19_v1_chr17_-_27139467 AK095569	85125	-	NM_001160407|TLCD1|116238|TLC domain containing 1##EU831756|TLCD1|116238|TLC domain containing 1##EU831834|TLCD1|116238|TLC domain containing 1##BC014072|TLCD1|116238|TLC domain containing 1##NM_138463|TLCD1|116238|TLC domain containing 1##NM_000984|RPL23A|6147|ribosomal protein L23a##U43701|RPL23A|6147|ribosomal protein L23a##AK130965|RPL23A|6147|ribosomal protein L23a##AK312123|RPL23A|6147|ribosomal protein L23a##BC058041|RPL23A|6147|ribosomal protein L23a##U37230|RPL23A|6147|ribosomal protein L23a##BC014459|RPL23A|6147|ribosomal protein L23a##U02032|RPL23A|6147|ribosomal protein L23a##BC112240|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##BC113705|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AK301429|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY242354|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY267371|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##HQ258347|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_178170|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_004295|TRAF4|9618|TNF receptor-associated factor 4##BC001769|TRAF4|9618|TNF receptor-associated factor 4##X80200|TRAF4|9618|TNF receptor-associated factor 4##AK300804|TRAF4|9618|TNF receptor-associated factor 4##AY937222|TRAF4|9618|TNF receptor-associated factor 4##AY937223|TRAF4|9618|TNF receptor-associated factor 4##AY937224|TRAF4|9618|TNF receptor-associated factor 4##DQ892825|TRAF4|9618|TNF receptor-associated factor 4##DQ896071|TRAF4|9618|TNF receptor-associated factor 4##AF082185|TRAF4|9618|TNF receptor-associated factor 4##AK095569|C17orf63|55731|chromosome 17 open reading frame 63	0.0	
chr17	62598664	62598747	reg1032082.p1	4.535	+	TSC_hg19_v1_chr17_+_62503186 AL832822	-95512	+	TSC_hg19_v1_chr17_+_62503108 AK316257 AK290587 AK297409 BC009518 NM_138363	-95581	+	TSC_hg19_v1_chr17_+_62502879 AK057326	-95801	+	AF310676 AB385561 AF301463 BC051283 BC093876 BC111945 TSC_hg19_v1_chr17_-_62658136	59362	-	TSC_hg19_v1_chr17_-_62658187 AY014180	59477	-	TSC_hg19_v1_chr17_-_62658414 CR936721 NM_022739	59660	-	AL832822|CEP95|90799|centrosomal protein 95kDa##AK316257|CEP95|90799|centrosomal protein 95kDa##AK290587|CEP95|90799|centrosomal protein 95kDa##AK297409|CEP95|90799|centrosomal protein 95kDa##BC009518|CEP95|90799|centrosomal protein 95kDa##NM_138363|CEP95|90799|centrosomal protein 95kDa##AK057326|CEP95|90799|centrosomal protein 95kDa##AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	0.128272	
chr20	52539470	52539606	reg1026275.p1	4.535	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-328739	-	AF041259 NM_006526	-339903	-	AK302570 NM_001193421	-737717	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	147524	-	AK315220 NM_003657	147765	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	250982	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr3	41240879	41241027	reg1035501.p1	4.535	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	-4	+	TSC_hg19_v1_chr3_+_40566471 BC101619 BC113415 CR749268	-674453	+	TSC_hg19_v1_chr3_+_40566380 AK127181 NM_001098414 NM_198484 AX721066 AK074366	-674551	+	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	71	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	762606	-	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	891880	+	NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC101619|ZNF621|285268|zinc finger protein 621##BC113415|ZNF621|285268|zinc finger protein 621##CR749268|ZNF621|285268|zinc finger protein 621##AK127181|ZNF621|285268|zinc finger protein 621##NM_001098414|ZNF621|285268|zinc finger protein 621##NM_198484|ZNF621|285268|zinc finger protein 621##AK074366|ZNF621|285268|zinc finger protein 621##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1	0.025424	
chr3	58318451	58318562	reg1023928.p1	4.535	+	AK311396 TSC_hg19_v1_chr3_+_58292265 AK311969	-26245	+	TSC_hg19_v1_chr3_+_58292022 BC012017 BC002441 BC007342	-26489	+	TSC_hg19_v1_chr3_+_58292000 AF001175	-26506	+	TSC_hg19_v1_chr3_+_58318618 AY274811 NM_017771 AK000342 AK295542	107	+	TSC_hg19_v1_chr3_+_58318663 BC008943 AB209688 AK131385 AY437879 AK296215 BC014479 AY847220 AY847221 AY847222 AF399753 CU677017 DQ124707 DQ124708	168	+	M34056 M19123 BC004115 AB528205 AM392999 AM393278 CR541911 CU674222 DQ891366 DQ894546 M34479 M34055 M54788 AB209241 AL117618 AK293153 BC000439 BC001924 TSC_hg19_v1_chr3_-_58419557 AK225569 AK311514 AK313022 J03576 X57778 AK225621 NM_000925 NM_001173468	100976	-	AK311396|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AK311969|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC012017|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC002441|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC007342|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AF001175|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AY274811|PXK|54899|PX domain containing serine/threonine kinase##NM_017771|PXK|54899|PX domain containing serine/threonine kinase##AK000342|PXK|54899|PX domain containing serine/threonine kinase##AK295542|PXK|54899|PX domain containing serine/threonine kinase##BC008943|PXK|54899|PX domain containing serine/threonine kinase##AB209688|PXK|54899|PX domain containing serine/threonine kinase##AK131385|PXK|54899|PX domain containing serine/threonine kinase##AY437879|PXK|54899|PX domain containing serine/threonine kinase##AK296215|PXK|54899|PX domain containing serine/threonine kinase##BC014479|PXK|54899|PX domain containing serine/threonine kinase##AY847220|PXK|54899|PX domain containing serine/threonine kinase##AY847221|PXK|54899|PX domain containing serine/threonine kinase##AY847222|PXK|54899|PX domain containing serine/threonine kinase##AF399753|PXK|54899|PX domain containing serine/threonine kinase##DQ124707|PXK|54899|PX domain containing serine/threonine kinase##DQ124708|PXK|54899|PX domain containing serine/threonine kinase##M34056|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M19123|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC004115|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM392999|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM393278|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##CR541911|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ891366|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ894546|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34479|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34055|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M54788|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AB209241|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AL117618|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK293153|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC000439|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC001924|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225569|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK311514|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK313022|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##J03576|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##X57778|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225621|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_000925|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_001173468|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta	0.139285	
chr5	118292514	118292681	reg1028003.p1	4.535	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-2382083	-	TSC_hg19_v1_chr5_+_115898220 D28352	-2394373	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-2871876	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	31641	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	114214	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	114568	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.991838	CTCF.p2:31:0.992
chr9	136819074	136819248	reg1028728.p1	4.535	+	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-214175	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-215683	-	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-317653	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	38285	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	114032	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	114465	-	BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3	0.0	
chr5	39600083	39600184	reg1028968.p2	4.534	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-174816	-	TSC_hg19_v1_chr5_-_39425082 AK314381	-175069	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	-175182	-	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	1079894	+	TSC_hg19_v1_chr5_+_40680042 L25124	1079911	+	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	1155907	-	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33	0.0	
chr7	100230668	100230769	reg1026987.p1	4.534	+	TSC_hg19_v1_chr7_-_100230676 AK000421	-17	-	TSC_hg19_v1_chr7_+_100210156 NM_001040098 NM_001040099 NM_023948 BC011653 BC009482 BC028475 BC005042	-20646	+	NM_001040097 TSC_hg19_v1_chr7_+_100209784	-20949	+	AF085928 NM_001206855	485	-	BC150192 AF067864 BC142630 NM_003227	8436	-	TSC_hg19_v1_chr7_-_100240337 AK022002	9649	-	AK000421|TFR2|7036|transferrin receptor 2##NM_001040098|MOSPD3|64598|motile sperm domain containing 3##NM_001040099|MOSPD3|64598|motile sperm domain containing 3##NM_023948|MOSPD3|64598|motile sperm domain containing 3##BC011653|MOSPD3|64598|motile sperm domain containing 3##BC009482|MOSPD3|64598|motile sperm domain containing 3##BC028475|MOSPD3|64598|motile sperm domain containing 3##BC005042|MOSPD3|64598|motile sperm domain containing 3##NM_001040097|MOSPD3|64598|motile sperm domain containing 3##AF085928|TFR2|7036|transferrin receptor 2##NM_001206855|TFR2|7036|transferrin receptor 2##BC150192|TFR2|7036|transferrin receptor 2##AF067864|TFR2|7036|transferrin receptor 2##BC142630|TFR2|7036|transferrin receptor 2##NM_003227|TFR2|7036|transferrin receptor 2##AK022002|TFR2|7036|transferrin receptor 2	0.0	
chr8	10834671	10834769	reg1004856.p1	4.534	+	TSC_hg19_v1_chr8_-_10697386 AF205718 AF418553 AJ344104	-137311	-	AY238941 AY523566 BC093762 BC143382 NM_017884 TSC_hg19_v1_chr8_-_10697379 AY029161 AK313715 BC015479 AK296724	-137386	-	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	-246736	-	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	224145	-	TSC_hg19_v1_chr8_+_11141999 BC034990 NM_015458	307292	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	307635	+	AF205718|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF418553|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ344104|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY238941|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY523566|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC093762|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC143382|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##NM_017884|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AK313715|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC015479|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7##AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##BC034990|MTMR9|66036|myotubularin related protein 9##NM_015458|MTMR9|66036|myotubularin related protein 9##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9	0.0	
chr12	120904441	120904606	reg1030506.p1	4.533	+	BC047778 BC064523 TSC_hg19_v1_chr12_+_120884274 BC034962 BC107145 BC107146	-20239	+	TSC_hg19_v1_chr12_+_120884261 NM_176818 AK094319	-20303	+	U75688 DQ893091 DQ896363 AF161481 AK312006 BC055313 BC002638 NM_016399	-20334	-	AB528895 TSC_hg19_v1_chr12_-_120907495 U30825 BC093971 BC093973 AK290644	2931	-	TSC_hg19_v1_chr12_-_120907522 AK294254 AK309778	2997	-	TSC_hg19_v1_chr12_-_120907535 NM_003769	3051	-	BC047778|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC064523|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC034962|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC107145|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC107146|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##NM_176818|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##AK094319|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##U75688|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ893091|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ896363|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AF161481|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AK312006|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC055313|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC002638|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##NM_016399|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##U30825|SRSF9|8683|serine/arginine-rich splicing factor 9##BC093971|SRSF9|8683|serine/arginine-rich splicing factor 9##BC093973|SRSF9|8683|serine/arginine-rich splicing factor 9##AK290644|SRSF9|8683|serine/arginine-rich splicing factor 9##AK294254|SRSF9|8683|serine/arginine-rich splicing factor 9##NM_003769|SRSF9|8683|serine/arginine-rich splicing factor 9	0.979336	CTCF.p2:16:0.979
chr14	105478641	105478757	reg1032730.p2	4.533	+	AK057249 NM_174891 BC137495 BC144671	-26056	+	NM_138420 TSC_hg19_v1_chr14_-_105444718	-33991	-	TSC_hg19_v1_chr14_-_105436817 BC004283 AK094143	-41879	-	TSC_hg19_v1_chr14_-_105487410 AF322239 BC011736 BC025263	8688	-	TSC_hg19_v1_chr14_-_105487413 AK303947	8717	-	TSC_hg19_v1_chr14_-_105487428 NM_017955 NM_145701	8725	-	AK057249|C14orf79|122616|chromosome 14 open reading frame 79##NM_174891|C14orf79|122616|chromosome 14 open reading frame 79##BC137495|C14orf79|122616|chromosome 14 open reading frame 79##BC144671|C14orf79|122616|chromosome 14 open reading frame 79##NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2##BC004283|AHNAK2|113146|AHNAK nucleoprotein 2##AK094143|AHNAK2|113146|AHNAK nucleoprotein 2##AF322239|CDCA4|55038|cell division cycle associated 4##BC011736|CDCA4|55038|cell division cycle associated 4##BC025263|CDCA4|55038|cell division cycle associated 4##AK303947|CDCA4|55038|cell division cycle associated 4##NM_017955|CDCA4|55038|cell division cycle associated 4##NM_145701|CDCA4|55038|cell division cycle associated 4	0.971389	CTCF.p2:7:0.971
chr14	58175981	58176086	reg1031725.p1	4.533	+	HQ258368 BC117405 BC143565 BC143566 BC143567 BC143568 AK307238 AK223127 AK001512 BC028060 NM_018168	-215530	-	TSC_hg19_v1_chr14_+_57857318 BC118589 BC122557	-318701	+	AK296372 AK092674 AX747665 NM_001011713 TSC_hg19_v1_chr14_+_57857298 AK304257 AK307348	-318750	+	NM_001206920	156558	-	BC146861 BX161411 NM_001001872 AK292605 BX161448 TSC_hg19_v1_chr14_-_58618906	442823	-	TSC_hg19_v1_chr14_-_58618916 AK292513	442891	-	HQ258368|C14orf105|55195|chromosome 14 open reading frame 105##BC117405|C14orf105|55195|chromosome 14 open reading frame 105##BC143565|C14orf105|55195|chromosome 14 open reading frame 105##BC143566|C14orf105|55195|chromosome 14 open reading frame 105##BC143567|C14orf105|55195|chromosome 14 open reading frame 105##BC143568|C14orf105|55195|chromosome 14 open reading frame 105##AK307238|C14orf105|55195|chromosome 14 open reading frame 105##AK223127|C14orf105|55195|chromosome 14 open reading frame 105##AK001512|C14orf105|55195|chromosome 14 open reading frame 105##BC028060|C14orf105|55195|chromosome 14 open reading frame 105##NM_018168|C14orf105|55195|chromosome 14 open reading frame 105##BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK296372|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK092674|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##NM_001011713|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK304257|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##AK307348|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##NM_001206920|SLC35F4|341880|solute carrier family 35, member F4##BC146861|C14orf37|145407|chromosome 14 open reading frame 37##BX161411|C14orf37|145407|chromosome 14 open reading frame 37##NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37##AK292605|C14orf37|145407|chromosome 14 open reading frame 37##BX161448|C14orf37|145407|chromosome 14 open reading frame 37##AK292513|C14orf37|145407|chromosome 14 open reading frame 37	0.737824	CTCF.p2:-7:0.738
chr15	80383374	80383454	reg1032164.p2	4.533	+	NM_001242915 NM_001242916 AF261138 AJ251095	-18488	+	TSC_hg19_v1_chr15_+_80352501 NM_001242914	-30914	+	TSC_hg19_v1_chr15_+_80352274 NM_001242913	-31091	+	NM_001242919	7343	+	TSC_hg19_v1_chr15_+_80445130 AK297965	61718	+	TSC_hg19_v1_chr15_+_80445268 D28440 NM_000137 AK313951	61838	+	NM_001242915|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242916|ZFAND6|54469|zinc finger, AN1-type domain 6##AF261138|ZFAND6|54469|zinc finger, AN1-type domain 6##AJ251095|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242914|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242913|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242919|ZFAND6|54469|zinc finger, AN1-type domain 6##AK297965|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##D28440|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##NM_000137|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK313951|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)	0.646774	CTCF.p2:9:0.647
chr8	145498485	145498589	reg1032345.p1	4.533	+	AX721087 NM_001008271 NM_001080514	-7962	+	BC003035 BC009915 NM_016458 AK098226 BC015471	-60634	+	AX721087 NM_001008271 NM_001080514	-177048	+	BC007274 TSC_hg19_v1_chr8_-_145515060 DQ896815 EU176248	16500	-	BC017674 TSC_hg19_v1_chr8_-_145515087 AK290677 BC013787 BC013980 AK315612	16542	-	TSC_hg19_v1_chr8_-_145515096 AK024840	16555	-	NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##BC007274|BOP1|23246|block of proliferation 1##DQ896815|BOP1|23246|block of proliferation 1##EU176248|BOP1|23246|block of proliferation 1##BC017674|BOP1|23246|block of proliferation 1##AK290677|BOP1|23246|block of proliferation 1##BC013787|BOP1|23246|block of proliferation 1##BC013980|BOP1|23246|block of proliferation 1##AK315612|BOP1|23246|block of proliferation 1##AK024840|BOP1|23246|block of proliferation 1	0.041669	
chr8	37395825	37395957	reg1041469.p1	4.533	+	NM_001031836 AK302391 BC028701	-754021	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-2302904	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-3938396	-	TSC_hg19_v1_chr8_-_37457377 AK025743	61477	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	157426	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	198215	+	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2	0.0	
chr14	54492522	54492615	reg1031327.p1	4.532	+	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	-69035	-	NM_130851	-71299	-	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-872518	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	371153	+	TSC_hg19_v1_chr14_-_54908095 BX248284 AY358635 AK074781 AK307074 AK311897 AF070654 AF104398 NM_005776 BC103741	415548	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	463117	-	BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##NM_130851|BMP4|652|bone morphogenetic protein 4##NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BX248284|CNIH|10175|cornichon homolog (Drosophila)##AY358635|CNIH|10175|cornichon homolog (Drosophila)##AK074781|CNIH|10175|cornichon homolog (Drosophila)##AK307074|CNIH|10175|cornichon homolog (Drosophila)##AK311897|CNIH|10175|cornichon homolog (Drosophila)##AF070654|CNIH|10175|cornichon homolog (Drosophila)##AF104398|CNIH|10175|cornichon homolog (Drosophila)##NM_005776|CNIH|10175|cornichon homolog (Drosophila)##BC103741|CNIH|10175|cornichon homolog (Drosophila)##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta	0.968652	CTCF.p2:3:0.634	CTCF.p2:4:0.335
chr3	119012699	119012880	reg1031062.p1	4.532	+	TSC_hg19_v1_chr3_-_118959726 AK001006 AK301688 AK314425 BX647468 CR749555 NM_003778 NM_212543	-53052	-	AK303924 AK313787 NM_006952 AB002155	-120375	+	AK057421 NM_152539 BC130475 BC144197	-147793	+	TSC_hg19_v1_chr3_+_119013229 AB033030 NM_020754	442	+	TSC_hg19_v1_chr3_+_119013513 AK293726 BC112163 BC112165 AB384581 HQ258543	831	+	TSC_hg19_v1_chr3_-_119182462 BC003192 BC010070 BC021277 AK222950 AK223248 AK001764 NM_018266	169680	-	AK001006|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK301688|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK314425|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BX647468|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##CR749555|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_003778|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_212543|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK303924|UPK1B|7348|uroplakin 1B##AK313787|UPK1B|7348|uroplakin 1B##NM_006952|UPK1B|7348|uroplakin 1B##AB002155|UPK1B|7348|uroplakin 1B##AK057421|C3orf30|152405|chromosome 3 open reading frame 30##NM_152539|C3orf30|152405|chromosome 3 open reading frame 30##BC130475|C3orf30|152405|chromosome 3 open reading frame 30##BC144197|C3orf30|152405|chromosome 3 open reading frame 30##AB033030|ARHGAP31|57514|Rho GTPase activating protein 31##NM_020754|ARHGAP31|57514|Rho GTPase activating protein 31##AK293726|ARHGAP31|57514|Rho GTPase activating protein 31##BC112163|ARHGAP31|57514|Rho GTPase activating protein 31##BC112165|ARHGAP31|57514|Rho GTPase activating protein 31##HQ258543|ARHGAP31|57514|Rho GTPase activating protein 31##BC003192|TMEM39A|55254|transmembrane protein 39A##BC010070|TMEM39A|55254|transmembrane protein 39A##BC021277|TMEM39A|55254|transmembrane protein 39A##AK222950|TMEM39A|55254|transmembrane protein 39A##AK223248|TMEM39A|55254|transmembrane protein 39A##AK001764|TMEM39A|55254|transmembrane protein 39A##NM_018266|TMEM39A|55254|transmembrane protein 39A	0.0	
chr4	154556066	154556183	reg1027384.p1	4.532	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-168632	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-290249	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-290337	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	49274	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	49306	+	TSC_hg19_v1_chr4_+_154605441 BC033756	49340	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.776811	CTCF.p2:-25:0.777
chr8	118929972	118930110	reg1030249.p1	4.532	+	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	-396999	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	-397083	+	NM_001172814 NM_173851	-782705	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	193920	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	704084	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	704166	-	BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##NM_080651|MED30|90390|mediator complex subunit 30##NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12	0.0	
chr8	7896332	7896455	reg1029334.p1	4.532	+	AK292586 NM_001193630	-112535	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-144189	+	AF295370 AJ237673 NM_018661 AB037972 AB590071 AF217245 AF516673	-157468	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	189749	+	TSC_hg19_v1_chr8_-_8175862 AF075060	279495	-	AK122582 NM_001080826	342829	-	AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF295370|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2	1.708265	CTCF.p2:50:0.968	CTCF.p2:-52:0.740
chrX	108718736	108718857	reg1028331.p2	4.532	+	NM_003604 AF007567	-739174	-	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	-1035712	+	BT007228 L22763 U04845 NM_001847 BC005305	-1036133	-	NM_001522 L37378	6489	-	AK023289 NM_018698 BC120984 BC120985	60218	+	NM_001242617 TSC_hg19_v1_chrX_+_108780077 AF201942 BC014888 AF212223	61287	+	NM_003604|IRS4|8471|insulin receptor substrate 4##AF007567|IRS4|8471|insulin receptor substrate 4##BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##NM_001522|GUCY2F|2986|guanylate cyclase 2F, retinal##L37378|GUCY2F|2986|guanylate cyclase 2F, retinal##AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2##AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2##BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2##AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2	0.378211	CTCF.p2:16:0.378
chrX	138841976	138842086	reg1035038.p1	4.532	+	AK302957 AK316416 NM_001099855 NM_001171876	-51677	-	X12556 AK313900 AK296488 NM_001171877 NM_001171878 NM_001171879 NM_005369	-117106	-	BC109214 BC109215 NM_000133 TSC_hg19_v1_chrX_+_138612919 J00137 AB186358 AK292749 FR846238 FR846239 FR846240 J00136 M11309	-229121	+	BC132728 BC132730 AJ580093 AJ580094 NM_001010986 NM_173694	72384	-	BC137148 BC137149 NM_001013403	205645	-	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	745221	-	AK302957|MCF2|4168|MCF.2 cell line derived transforming sequence##AK316416|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001099855|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171876|MCF2|4168|MCF.2 cell line derived transforming sequence##X12556|MCF2|4168|MCF.2 cell line derived transforming sequence##AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence##AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence##BC109214|F9|2158|coagulation factor IX##BC109215|F9|2158|coagulation factor IX##NM_000133|F9|2158|coagulation factor IX##J00137|F9|2158|coagulation factor IX##AB186358|F9|2158|coagulation factor IX##AK292749|F9|2158|coagulation factor IX##FR846238|F9|2158|coagulation factor IX##FR846239|F9|2158|coagulation factor IX##FR846240|F9|2158|coagulation factor IX##J00136|F9|2158|coagulation factor IX##M11309|F9|2158|coagulation factor IX##BC132728|ATP11C|286410|ATPase, class VI, type 11C##BC132730|ATP11C|286410|ATPase, class VI, type 11C##AJ580093|ATP11C|286410|ATPase, class VI, type 11C##AJ580094|ATP11C|286410|ATPase, class VI, type 11C##NM_001010986|ATP11C|286410|ATPase, class VI, type 11C##NM_173694|ATP11C|286410|ATPase, class VI, type 11C##BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3	0.987532	CTCF.p2:3:0.988
chr1	12467568	12467738	reg1030363.p1	4.531	+	TSC_hg19_v1_chr1_+_12403045 AK057675	-64583	+	TSC_hg19_v1_chr1_+_12290088 NM_015378 NM_018156 AJ608774 AJ608775 AL162331	-177546	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	-240542	+	DQ426869 DQ893006 DQ896252 CU678154 AF061741 AK222593 BC002730 TSC_hg19_v1_chr1_-_12677700 AK310202 AY358093 AK309282 AK312961 BX648476 NM_004753	209930	-	NM_001013630	236912	+	AK127828 NM_001103169 NM_001103170	308464	+	AK057675|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_015378|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_018156|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608774|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608775|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AL162331|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_001013630|AADACL4|343066|arylacetamide deacetylase-like 4##AK127828|AADACL3|126767|arylacetamide deacetylase-like 3##NM_001103169|AADACL3|126767|arylacetamide deacetylase-like 3##NM_001103170|AADACL3|126767|arylacetamide deacetylase-like 3	0.950989	CTCF.p2:20:0.951
chr11	65883218	65883338	reg1028880.p1	4.531	+	TSC_hg19_v1_chr11_+_65837841 AK096644 NM_018026 AK098336 AY320283 BC010096 BC052577	-45368	+	TSC_hg19_v1_chr11_+_65819834 NM_006842 AK290850 BC010372 BC053577 BX537771 AB463285 BC000401 U41371	-63438	+	AB053232 NM_033036	-66628	-	TSC_hg19_v1_chr11_+_65984213 AB033001	100944	+	TSC_hg19_v1_chr11_+_65988172 BC055288	104917	+	AK293966 TSC_hg19_v1_chr11_+_65998046 BC042909	114697	+	AK096644|PACS1|55690|phosphofurin acidic cluster sorting protein 1##NM_018026|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AK098336|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AY320283|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC010096|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC052577|PACS1|55690|phosphofurin acidic cluster sorting protein 1##NM_006842|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##AK290850|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BC053577|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BX537771|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BC000401|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##U41371|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##AB053232|GAL3ST3|89792|galactose-3-O-sulfotransferase 3##NM_033036|GAL3ST3|89792|galactose-3-O-sulfotransferase 3##AB033001|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC055288|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AK293966|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC042909|PACS1|55690|phosphofurin acidic cluster sorting protein 1	0.0	
chr1	2071512	2071625	reg1019931.p2	4.531	+	NM_001033582	-35414	+	NM_001242874 AK294782	-66101	+	AK294649 NM_001033581	-66484	+	TSC_hg19_v1_chr1_-_2126212 BC041041 AF469129 BC066360 AK055593 BC103992 NM_182533	54611	-	AK127994 NM_001146310	67603	-	NM_003036 X15218 TSC_hg19_v1_chr1_+_2160159	88601	+	NM_001033582|PRKCZ|5590|protein kinase C, zeta##NM_001242874|PRKCZ|5590|protein kinase C, zeta##AK294782|PRKCZ|5590|protein kinase C, zeta##AK294649|PRKCZ|5590|protein kinase C, zeta##NM_001033581|PRKCZ|5590|protein kinase C, zeta##BC041041|C1orf86|199990|chromosome 1 open reading frame 86##AF469129|C1orf86|199990|chromosome 1 open reading frame 86##BC066360|C1orf86|199990|chromosome 1 open reading frame 86##AK055593|C1orf86|199990|chromosome 1 open reading frame 86##BC103992|C1orf86|199990|chromosome 1 open reading frame 86##NM_182533|C1orf86|199990|chromosome 1 open reading frame 86##AK127994|C1orf86|199990|chromosome 1 open reading frame 86##NM_001146310|C1orf86|199990|chromosome 1 open reading frame 86##NM_003036|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##X15218|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)	0.982663	CTCF.p2:9:0.983
chr19	1066927	1067007	reg1029274.p1	4.531	+	AK310127 TSC_hg19_v1_chr19_+_1040114 AK301108 AK310909	-26833	+	TSC_hg19_v1_chr19_+_1040105 NM_019112	-26875	+	AK024835 AK057960 AK293171 TSC_hg19_v1_chr19_+_1026627 BC141818 BC141833 D83735 AK222924 AK300788 D86059 BC148264 CR541810 CR541831 AY927510 AY927514	-40305	+	TSC_hg19_v1_chr19_+_1067170 BC065223 NM_012292	176	+	AK304271 TSC_hg19_v1_chr19_+_1067315 AK304765 D86976	359	+	TSC_hg19_v1_chr19_+_1067558 BC035564	605	+	AK310127|ABCA7|10347|ATP-binding cassette, sub-family A (ABC1), member 7##AK301108|ABCA7|10347|ATP-binding cassette, sub-family A (ABC1), member 7##AK310909|ABCA7|10347|ATP-binding cassette, sub-family A (ABC1), member 7##NM_019112|ABCA7|10347|ATP-binding cassette, sub-family A (ABC1), member 7##AK024835|CNN2|1265|calponin 2##AK057960|CNN2|1265|calponin 2##AK293171|CNN2|1265|calponin 2##BC141818|CNN2|1265|calponin 2##BC141833|CNN2|1265|calponin 2##D83735|CNN2|1265|calponin 2##AK222924|CNN2|1265|calponin 2##AK300788|CNN2|1265|calponin 2##D86059|CNN2|1265|calponin 2##BC148264|CNN2|1265|calponin 2##CR541810|CNN2|1265|calponin 2##CR541831|CNN2|1265|calponin 2##AY927514|CNN2|1265|calponin 2##BC065223|HMHA1|23526|histocompatibility (minor) HA-1##NM_012292|HMHA1|23526|histocompatibility (minor) HA-1##AK304271|HMHA1|23526|histocompatibility (minor) HA-1##AK304765|HMHA1|23526|histocompatibility (minor) HA-1##D86976|HMHA1|23526|histocompatibility (minor) HA-1##BC035564|HMHA1|23526|histocompatibility (minor) HA-1	0.0	
chr2	47537332	47537478	reg1024549.p1	4.531	+	TSC_hg19_v1_chr2_-_47403685 NM_001743	-133696	-	TSC_hg19_v1_chr2_-_47403656 BC008437	-133751	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	-133755	-	NM_002354 TSC_hg19_v1_chr2_+_47596376	58937	+	TSC_hg19_v1_chr2_+_47596449 AK026585 BC014785 M26481 M32325 X14758 M33011 M32306 DQ891338 DQ894520 CR542259 CR542283	59140	+	TSC_hg19_v1_chr2_+_47630218 AK304496	92799	+	NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC008437|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##NM_002354|EPCAM|4072|epithelial cell adhesion molecule##AK026585|EPCAM|4072|epithelial cell adhesion molecule##BC014785|EPCAM|4072|epithelial cell adhesion molecule##M26481|EPCAM|4072|epithelial cell adhesion molecule##M32325|EPCAM|4072|epithelial cell adhesion molecule##X14758|EPCAM|4072|epithelial cell adhesion molecule##M33011|EPCAM|4072|epithelial cell adhesion molecule##M32306|EPCAM|4072|epithelial cell adhesion molecule##DQ891338|EPCAM|4072|epithelial cell adhesion molecule##DQ894520|EPCAM|4072|epithelial cell adhesion molecule##CR542259|EPCAM|4072|epithelial cell adhesion molecule##CR542283|EPCAM|4072|epithelial cell adhesion molecule##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.0	
chr3	195641787	195641967	reg1000659.p1	4.531	+	NM_005781 L13738	-5961	-	AK131539 NM_001010938	-19446	-	BC008884 AK225786 BC020389 TSC_hg19_v1_chr3_-_195619679	-22312	-	TSC_hg19_v1_chr3_-_195717156 BC071730 AK300421 AK316025 AK299148	75254	-	TSC_hg19_v1_chr3_-_195808954 AB209254 X01060 BC001188	167067	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	167084	-	NM_005781|TNK2|10188|tyrosine kinase, non-receptor, 2##L13738|TNK2|10188|tyrosine kinase, non-receptor, 2##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2##BC008884|TNK2|10188|tyrosine kinase, non-receptor, 2##AK225786|TNK2|10188|tyrosine kinase, non-receptor, 2##BC020389|TNK2|10188|tyrosine kinase, non-receptor, 2##BC071730|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AK316025|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK299148|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AB209254|TFRC|7037|transferrin receptor (p90, CD71)##X01060|TFRC|7037|transferrin receptor (p90, CD71)##BC001188|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)	0.0	
chr7	149296101	149296245	reg1029286.p1	4.531	+	TSC_hg19_v1_chr7_-_149194899 NM_001163474 NM_152557 AK128244	-101275	-	TSC_hg19_v1_chr7_-_149194830 AK291814	-101333	-	TSC_hg19_v1_chr7_-_149194795 BC068505 BC035586	-101388	-	AB590454 AK295771 TSC_hg19_v1_chr7_-_149321793 AK022762	25569	-	TSC_hg19_v1_chr7_-_149321856 BC047675	25681	-	TSC_hg19_v1_chr7_+_149412043 BC142722 BC146667 AB058765 BC150330 BC152409 NM_032534	115914	+	NM_001163474|ZNF746|155061|zinc finger protein 746##NM_152557|ZNF746|155061|zinc finger protein 746##AK128244|ZNF746|155061|zinc finger protein 746##AK291814|ZNF746|155061|zinc finger protein 746##BC068505|ZNF746|155061|zinc finger protein 746##BC035586|ZNF746|155061|zinc finger protein 746##AK295771|ZNF767|79970|zinc finger family member 767##AK022762|ZNF767|79970|zinc finger family member 767##BC047675|ZNF767|79970|zinc finger family member 767##BC142722|KRBA1|84626|KRAB-A domain containing 1##BC146667|KRBA1|84626|KRAB-A domain containing 1##AB058765|KRBA1|84626|KRAB-A domain containing 1##BC150330|KRBA1|84626|KRAB-A domain containing 1##BC152409|KRBA1|84626|KRAB-A domain containing 1##NM_032534|KRBA1|84626|KRAB-A domain containing 1	0.014547	
chr9	16648694	16648762	reg1026835.p1	4.531	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-1095707	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-1137768	-	AF098483 AF098482 NM_021144	-1138481	-	TSC_hg19_v1_chr9_-_16727889 AY438376	79169	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	221939	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	222038	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.0	
chr9	42750113	42750237	reg1032828.p2	4.531	+	NM_001099279 NM_199244	-32942	+	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	-381817	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-795261	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	383312	-	NM_001145196	880554	-	TSC_hg19_v1_chr9_+_43684876 NM_001201380	934668	+	NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B	0.0	
chr2	90060173	90060321	reg1032715.p1	4.530	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-440394	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-547014	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-617658	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	17507	+	TSC_hg19_v1_chr2_+_90211706 Z69013	151471	+	TSC_hg19_v1_chr2_-_91847997 BC030764	1787756	-	BC070334|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus	0.988725	CTCF.p2:-9:0.989
chr6	16483380	16483482	reg1031969.p1	4.530	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-244580	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-340121	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-353994	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	278266	-	NM_001190766	619057	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	798423	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.079767	
chr9	136262192	136262317	reg1034658.p1	4.530	+	TSC_hg19_v1_chr9_+_136243236 BC036504 NM_153710 AK131533 AK131545	-18976	+	AK294947 TSC_hg19_v1_chr9_+_136243210	-19091	+	NM_033161 TSC_hg19_v1_chr9_-_136242971 AK315488	-19263	-	CU679283 DQ891911 DQ895096 AM392617 TSC_hg19_v1_chr9_-_136283131 AK025493 BC071691 AK310164 BC009274 AK314333 AK315904 AK304547 AL136894	20805	-	TSC_hg19_v1_chr9_-_136283157 AF273304 AF295774 NM_020385	20906	-	AK295982 TSC_hg19_v1_chr9_-_136283306	21046	-	BC036504|C9orf96|169436|chromosome 9 open reading frame 96##NM_153710|C9orf96|169436|chromosome 9 open reading frame 96##AK131533|C9orf96|169436|chromosome 9 open reading frame 96##AK131545|C9orf96|169436|chromosome 9 open reading frame 96##AK294947|C9orf96|169436|chromosome 9 open reading frame 96##NM_033161|SURF4|6836|surfeit 4##AK315488|SURF4|6836|surfeit 4##DQ891911|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##DQ895096|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AM392617|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AK025493|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##BC071691|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AK310164|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##BC009274|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AK314333|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AK315904|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AK304547|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AL136894|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AF273304|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AF295774|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##NM_020385|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)##AK295982|REXO4|57109|REX4, RNA exonuclease 4 homolog (S. cerevisiae)	0.0	
chr1	151043650	151043824	reg1032188.p2	4.529	+	BC027033 NM_144618 TSC_hg19_v1_chr1_+_151043238 AK092230 AX747418 AK313606 AK301882	-553	+	TSC_hg19_v1_chr1_+_151032908 BC019253	-10828	+	AK057755 TSC_hg19_v1_chr1_+_151032886 BC007079 BC008445	-10851	+	AF339152 AF339153 AF339154 AB022434 AB058772 TSC_hg19_v1_chr1_-_151119105 AK302862 AK311613 NM_001178061 NM_001178062 NM_030913	75310	-	NM_001204848 NM_024575 AF271774 AL833373 AK027120 AK225472 TSC_hg19_v1_chr1_+_151129149 BC063014	85393	+	TSC_hg19_v1_chr1_-_151138337 BX647911 NM_212551 AK298706 NM_001136543	94639	-	BC027033|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##NM_144618|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##AK092230|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##AK313606|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##AK301882|GABPB2|126626|GA binding protein transcription factor, beta subunit 2##BC019253|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##AK057755|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##BC007079|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##BC008445|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##AF339152|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AF339153|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AF339154|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AB022434|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AB058772|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AK302862|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##AK311613|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##NM_001178061|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##NM_001178062|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##NM_030913|SEMA6C|10500|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C##NM_001204848|TNFAIP8L2-SCNM1|100534012|TNFAIP8L2-SCNM1 readthrough##NM_024575|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##AF271774|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##AL833373|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##AK027120|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##AK225472|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##BC063014|TNFAIP8L2|79626|tumor necrosis factor, alpha-induced protein 8-like 2##BX647911|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##NM_212551|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##AK298706|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##NM_001136543|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1	0.999722	CTCF.p2:-39:1.000
chr1	2246773	2246849	reg1027552.p1	4.529	+	NM_003036 X15218 TSC_hg19_v1_chr1_+_2160159	-86642	+	AK127994 NM_001146310	-107640	-	TSC_hg19_v1_chr1_-_2126212 BC041041 AF469129 BC066360 AK055593 BC103992 NM_182533	-120632	-	TSC_hg19_v1_chr1_-_2322994 AK024003 NM_024848	76181	-	TSC_hg19_v1_chr1_-_2322997 AK299217 AK310323 BC021704	76259	-	TSC_hg19_v1_chr1_+_2323265 NM_007033 AF157324	76424	+	NM_003036|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##X15218|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##AK127994|C1orf86|199990|chromosome 1 open reading frame 86##NM_001146310|C1orf86|199990|chromosome 1 open reading frame 86##BC041041|C1orf86|199990|chromosome 1 open reading frame 86##AF469129|C1orf86|199990|chromosome 1 open reading frame 86##BC066360|C1orf86|199990|chromosome 1 open reading frame 86##AK055593|C1orf86|199990|chromosome 1 open reading frame 86##BC103992|C1orf86|199990|chromosome 1 open reading frame 86##NM_182533|C1orf86|199990|chromosome 1 open reading frame 86##AK024003|MORN1|79906|MORN repeat containing 1##NM_024848|MORN1|79906|MORN repeat containing 1##AK299217|MORN1|79906|MORN repeat containing 1##AK310323|MORN1|79906|MORN repeat containing 1##BC021704|MORN1|79906|MORN repeat containing 1##NM_007033|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##AF157324|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)	0.0	
chr16	12641281	12641461	reg1032281.p1	4.529	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-570798	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-582287	+	NM_001130007	-630853	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	256280	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	256348	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	354097	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr2	53037700	53037822	reg1029045.p1	4.529	+	EF539882 AK124726 NM_001135659 NM_004801	-1778157	-	TSC_hg19_v1_chr2_-_51259258 BC046631	-1778503	-	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	-2462839	-	BC019239 BC025376 NM_001008708 BC053896 BC017941 AK097260	957195	+	AK056069 NM_001201965 BC009569 AB209795 TSC_hg19_v1_chr2_-_54014091 AK000985 AK303133 AK001283 NM_016115 NM_145863	976317	-	NM_001127397 NM_001127398 NM_015701 TSC_hg19_v1_chr2_+_54014180 AY358717 AK001913 AY453410 BC013129 BC022228 AK315477 DQ894762	976446	+	EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1##BC046631|NRXN1|9378|neurexin 1##AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##BC019239|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC025376|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##NM_001008708|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC053896|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC017941|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##AK056069|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_001201965|ASB3|51130|ankyrin repeat and SOCS box containing 3##BC009569|ASB3|51130|ankyrin repeat and SOCS box containing 3##AB209795|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK000985|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK303133|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK001283|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_016115|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_145863|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_001127397|ERLEC1|27248|endoplasmic reticulum lectin 1##NM_001127398|ERLEC1|27248|endoplasmic reticulum lectin 1##NM_015701|ERLEC1|27248|endoplasmic reticulum lectin 1##AY358717|ERLEC1|27248|endoplasmic reticulum lectin 1##AK001913|ERLEC1|27248|endoplasmic reticulum lectin 1##AY453410|ERLEC1|27248|endoplasmic reticulum lectin 1##BC013129|ERLEC1|27248|endoplasmic reticulum lectin 1##BC022228|ERLEC1|27248|endoplasmic reticulum lectin 1##AK315477|ERLEC1|27248|endoplasmic reticulum lectin 1##DQ894762|ERLEC1|27248|endoplasmic reticulum lectin 1	0.468982	CTCF.p2:2:0.469
chr2	63168703	63168821	reg1032936.p1	4.529	+	BC029477 NM_001142614	-234732	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	-235796	+	AK292545 NM_001142615	-267777	+	NM_001199770	108429	+	NM_014562 TSC_hg19_v1_chr2_+_63277964 AK095680 AK297308 BC007621	109203	+	TSC_hg19_v1_chr2_-_63815560 AK310290	646778	-	BC029477|EHBP1|23301|EH domain binding protein 1##NM_001142614|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##NM_001199770|OTX1|5013|orthodenticle homeobox 1##NM_014562|OTX1|5013|orthodenticle homeobox 1##AK095680|OTX1|5013|orthodenticle homeobox 1##AK297308|OTX1|5013|orthodenticle homeobox 1##BC007621|OTX1|5013|orthodenticle homeobox 1##AK310290|WDPCP|51057|WD repeat containing planar cell polarity effector	0.0	
chr3	124860425	124860605	reg1023901.p1	4.529	+	BC063528 TSC_hg19_v1_chr3_-_124842461	-18060	-	AB384586 NM_020733 TSC_hg19_v1_chr3_-_124774842	-85715	-	BC067235 TSC_hg19_v1_chr3_-_124732404	-128123	-	AF345197 HQ258349 BC126158 BC126160 AF390442 NM_001195483	69702	-	AK123001 TSC_hg19_v1_chr3_-_124931591 AX721165 AK131070 NM_024628	71070	-	AF039019 AL833616 AF432210 AJ236885 L04282 BC035591 BC018971 AK314203 TSC_hg19_v1_chr3_-_125094153 BC050260 NM_021964	233585	-	BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)##BC067235|HEG1|57493|HEG homolog 1 (zebrafish)##AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AK123001|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_024628|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF039019|ZNF148|7707|zinc finger protein 148##AL833616|ZNF148|7707|zinc finger protein 148##AF432210|ZNF148|7707|zinc finger protein 148##AJ236885|ZNF148|7707|zinc finger protein 148##L04282|ZNF148|7707|zinc finger protein 148##BC035591|ZNF148|7707|zinc finger protein 148##BC018971|ZNF148|7707|zinc finger protein 148##AK314203|ZNF148|7707|zinc finger protein 148##BC050260|ZNF148|7707|zinc finger protein 148##NM_021964|ZNF148|7707|zinc finger protein 148	0.027773	
chr5	143866931	143867024	reg1030122.p2	4.529	+	AK292477 CR749266 NM_020768	-316562	+	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	-316731	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	-316801	-	TSC_hg19_v1_chr5_-_145214906 BC028175 AK095695 AK125215 NM_182960 NM_205846 BC012033 NM_138492	1347911	-	NM_001080516	1385553	-	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	1449194	+	AK292477|KCTD16|57528|potassium channel tetramerisation domain containing 16##CR749266|KCTD16|57528|potassium channel tetramerisation domain containing 16##NM_020768|KCTD16|57528|potassium channel tetramerisation domain containing 16##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC028175|PRELID2|153768|PRELI domain containing 2##AK095695|PRELID2|153768|PRELI domain containing 2##AK125215|PRELID2|153768|PRELI domain containing 2##NM_182960|PRELID2|153768|PRELI domain containing 2##NM_205846|PRELID2|153768|PRELI domain containing 2##BC012033|PRELID2|153768|PRELI domain containing 2##NM_138492|PRELID2|153768|PRELI domain containing 2##NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2	0.340223	CTCF.p2:-12:0.340
chr10	124408188	124408271	reg1002011.p1	4.528	+	AF159456 AJ000342 AJ243212 AJ243224 NM_004406 NM_007329 NM_017579 BC153299 AJ297935 AK304149 TSC_hg19_v1_chr10_+_124320269 AK304128	-88003	+	TSC_hg19_v1_chr10_+_124221068 AK091944 AX747270 NM_002775 AK092476 AK290089 BC011352 D87258 BC031082 Y07921 AB590567	-187153	+	BC066349 NM_001099667 BC090924	-194050	+	BC140922 BC065903 NM_001010912	51104	-	AY260047 AY260048 AY260049 AY260050 NM_022034	197461	-	BC031343 AK300849 NM_001204364 NM_152644	230887	-	AF159456|DMBT1|1755|deleted in malignant brain tumors 1##AJ000342|DMBT1|1755|deleted in malignant brain tumors 1##AJ243212|DMBT1|1755|deleted in malignant brain tumors 1##AJ243224|DMBT1|1755|deleted in malignant brain tumors 1##NM_004406|DMBT1|1755|deleted in malignant brain tumors 1##NM_007329|DMBT1|1755|deleted in malignant brain tumors 1##NM_017579|DMBT1|1755|deleted in malignant brain tumors 1##BC153299|DMBT1|1755|deleted in malignant brain tumors 1##AJ297935|DMBT1|1755|deleted in malignant brain tumors 1##AK304149|DMBT1|1755|deleted in malignant brain tumors 1##AK304128|DMBT1|1755|deleted in malignant brain tumors 1##AK091944|HTRA1|5654|HtrA serine peptidase 1##NM_002775|HTRA1|5654|HtrA serine peptidase 1##AK092476|HTRA1|5654|HtrA serine peptidase 1##AK290089|HTRA1|5654|HtrA serine peptidase 1##BC011352|HTRA1|5654|HtrA serine peptidase 1##D87258|HTRA1|5654|HtrA serine peptidase 1##BC031082|HTRA1|5654|HtrA serine peptidase 1##Y07921|HTRA1|5654|HtrA serine peptidase 1##BC066349|ARMS2|387715|age-related maculopathy susceptibility 2##NM_001099667|ARMS2|387715|age-related maculopathy susceptibility 2##BC090924|ARMS2|387715|age-related maculopathy susceptibility 2##BC140922|C10orf120|399814|chromosome 10 open reading frame 120##BC065903|C10orf120|399814|chromosome 10 open reading frame 120##NM_001010912|C10orf120|399814|chromosome 10 open reading frame 120##AY260047|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260048|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260049|CUZD1|50624|CUB and zona pellucida-like domains 1##AY260050|CUZD1|50624|CUB and zona pellucida-like domains 1##NM_022034|CUZD1|50624|CUB and zona pellucida-like domains 1##BC031343|FAM24B|196792|family with sequence similarity 24, member B##AK300849|FAM24B-CUZD1|100533195|FAM24B-CUZD1 readthrough##NM_001204364|FAM24B|196792|family with sequence similarity 24, member B##NM_152644|FAM24B|196792|family with sequence similarity 24, member B	0.0	
chr10	76631465	76631606	reg1028619.p1	4.528	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-45181	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-694948	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-695005	+	AY686755 NM_001003892 BC137321 BC137322	186770	-	AB027004 AB103375 NM_016364	227712	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	237379	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr11	47574759	47574901	reg1029886.p1	4.528	+	TSC_hg19_v1_chr11_-_47574804 NM_006560	-45	-	TSC_hg19_v1_chr11_-_47574683 BC036782 U63289	-187	-	AB210019 NM_001172639	-29291	-	AK127967 BC073798 NM_001143984 NM_175732	12104	+	TSC_hg19_v1_chr11_+_47587150 AK294640 BC107573 BC020242 CU676524 AY333987 EU831440 EU831532	12326	+	TSC_hg19_v1_chr11_-_47600240 AK091607	25444	-	NM_006560|CELF1|10658|CUGBP, Elav-like family member 1##BC036782|CELF1|10658|CUGBP, Elav-like family member 1##U63289|CELF1|10658|CUGBP, Elav-like family member 1##AB210019|CELF1|10658|CUGBP, Elav-like family member 1##NM_001172639|CELF1|10658|CUGBP, Elav-like family member 1##BC073798|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##NM_001143984|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##NM_175732|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##AK294640|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##BC107573|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##BC020242|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##AY333987|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##EU831440|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##EU831532|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##AK091607|KBTBD4|55709|kelch repeat and BTB (POZ) domain containing 4	0.0	
chr13	37643268	37643380	reg1031147.p1	4.528	+	AK292376 TSC_hg19_v1_chr13_-_37633791 AF445026 AF093250 AK225376 AJ130894 BC001145 AK304227 BC030686 NM_001014286 NM_017569	-9611	-	BC020773 TSC_hg19_v1_chr13_+_37574924 AF279901 AB463623 DQ893134 DQ896414	-68395	+	NM_181503	-68647	+	BC028723 NM_145203	36476	-	EU262883 EU262884 EU262885 EU262886 AY140646 AY918092 BC106709 BC106710 D13666 GU354210 D13665 TSC_hg19_v1_chr13_-_38172906 NM_001135934 NM_001135935 NM_001135936 NM_006475	529597	-	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	800574	-	AK292376|FAM48A|55578|family with sequence similarity 48, member A##AF445026|FAM48A|55578|family with sequence similarity 48, member A##AF093250|FAM48A|55578|family with sequence similarity 48, member A##AK225376|FAM48A|55578|family with sequence similarity 48, member A##AJ130894|FAM48A|55578|family with sequence similarity 48, member A##BC001145|FAM48A|55578|family with sequence similarity 48, member A##AK304227|FAM48A|55578|family with sequence similarity 48, member A##BC030686|FAM48A|55578|family with sequence similarity 48, member A##NM_001014286|FAM48A|55578|family with sequence similarity 48, member A##NM_017569|FAM48A|55578|family with sequence similarity 48, member A##BC020773|EXOSC8|11340|exosome component 8##AF279901|EXOSC8|11340|exosome component 8##DQ893134|EXOSC8|11340|exosome component 8##DQ896414|EXOSC8|11340|exosome component 8##NM_181503|EXOSC8|11340|exosome component 8##BC028723|CSNK1A1L|122011|casein kinase 1, alpha 1-like##NM_145203|CSNK1A1L|122011|casein kinase 1, alpha 1-like##EU262883|POSTN|10631|periostin, osteoblast specific factor##EU262884|POSTN|10631|periostin, osteoblast specific factor##EU262885|POSTN|10631|periostin, osteoblast specific factor##EU262886|POSTN|10631|periostin, osteoblast specific factor##AY140646|POSTN|10631|periostin, osteoblast specific factor##AY918092|POSTN|10631|periostin, osteoblast specific factor##BC106709|POSTN|10631|periostin, osteoblast specific factor##BC106710|POSTN|10631|periostin, osteoblast specific factor##D13666|POSTN|10631|periostin, osteoblast specific factor##GU354210|POSTN|10631|periostin, osteoblast specific factor##D13665|POSTN|10631|periostin, osteoblast specific factor##NM_001135934|POSTN|10631|periostin, osteoblast specific factor##NM_001135935|POSTN|10631|periostin, osteoblast specific factor##NM_001135936|POSTN|10631|periostin, osteoblast specific factor##NM_006475|POSTN|10631|periostin, osteoblast specific factor##BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4	0.391116	CTCF.p2:10:0.391
chr14	19932494	19932626	reg1032548.p1	4.528	+	AY462874 AY465171 AY465172 NM_001005356 BC127623	-379186	+	BC136730 BC136731 NM_001013354	-555003	+	None	None	None	AY462874 AY465172 NM_001145442	87711	-	NM_001197287	249930	-	AB463966 NM_172194	283026	+	AY462874|POTEG|404785|POTE ankyrin domain family, member G##AY465171|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##NM_001005356|POTEG|404785|POTE ankyrin domain family, member G##BC127623|POTEG|404785|POTE ankyrin domain family, member G##BC136730|OR11H12|440153|olfactory receptor, family 11, subfamily H, member 12##BC136731|OR11H12|440153|olfactory receptor, family 11, subfamily H, member 12##NM_001013354|OR11H12|440153|olfactory receptor, family 11, subfamily H, member 12##AY462874|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##NM_001145442|POTEM|641455|POTE ankyrin domain family, member M##NM_001197287|OR11H2|79334|olfactory receptor, family 11, subfamily H, member 2##NM_172194|OR4Q3|441669|olfactory receptor, family 4, subfamily Q, member 3	0.141898	
chr2	185228095	185228234	reg1033200.p1	4.528	+	AF411516 NM_138285 AF514993 BC022333 BC061698 AK289601 BC111016 TSC_hg19_v1_chr2_+_183989170 BC035597 AK290760 AK298199 CU692362	-1239031	+	TSC_hg19_v1_chr2_+_183943518 AF486808 BC093958 BC112005 BC143337 AB038770 AB590332 DQ891206 DQ894389 BX647818	-1284515	+	TSC_hg19_v1_chr2_+_183943474 AK314078 BC035000	-1284686	+	AY327407 NM_194250 TSC_hg19_v1_chr2_+_185463097 AK307596	234958	+	BC150198 TSC_hg19_v1_chr2_+_185463252 AK131402	235079	+	BC142612 TSC_hg19_v1_chr2_+_185463319	235141	+	AF411516|NUP35|129401|nucleoporin 35kDa##NM_138285|NUP35|129401|nucleoporin 35kDa##AF514993|NUP35|129401|nucleoporin 35kDa##BC022333|NUP35|129401|nucleoporin 35kDa##BC061698|NUP35|129401|nucleoporin 35kDa##AK289601|NUP35|129401|nucleoporin 35kDa##BC111016|NUP35|129401|nucleoporin 35kDa##BC035597|NUP35|129401|nucleoporin 35kDa##AK290760|NUP35|129401|nucleoporin 35kDa##AK298199|NUP35|129401|nucleoporin 35kDa##AF486808|DUSP19|142679|dual specificity phosphatase 19##BC093958|DUSP19|142679|dual specificity phosphatase 19##BC112005|DUSP19|142679|dual specificity phosphatase 19##BC143337|DUSP19|142679|dual specificity phosphatase 19##AB038770|DUSP19|142679|dual specificity phosphatase 19##DQ891206|DUSP19|142679|dual specificity phosphatase 19##DQ894389|DUSP19|142679|dual specificity phosphatase 19##BX647818|DUSP19|142679|dual specificity phosphatase 19##AK314078|DUSP19|142679|dual specificity phosphatase 19##BC035000|DUSP19|142679|dual specificity phosphatase 19##AY327407|ZNF804A|91752|zinc finger protein 804A##NM_194250|ZNF804A|91752|zinc finger protein 804A##AK307596|ZNF804A|91752|zinc finger protein 804A##BC150198|ZNF804A|91752|zinc finger protein 804A##AK131402|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A	0.759207	CTCF.p2:-20:0.759
chr7	102615554	102615661	reg1031598.p1	4.528	+	NM_001031692 NM_005824 TSC_hg19_v1_chr7_+_102553446 AK226021 AK225701 U32907 AK290305 BC027903 AY358889	-62175	+	TSC_hg19_v1_chr7_+_102389473 NM_001145268 NM_001145269 BC029175 AK297455 AK298753 AK054745 DQ893359 DQ896678	-226117	+	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	-303487	-	AK097537 NM_145032	99407	-	AY359238 AY359239 AK095387 BC031285 BC026121 NM_001111038	99622	-	TSC_hg19_v1_chr7_+_102715335 AY150851 AY150852 AY150853 AY150854 NM_001161009 NM_001161010 NM_001161011 NM_001161012 NM_001161013 NM_031905	99709	+	NM_001031692|LRRC17|10234|leucine rich repeat containing 17##NM_005824|LRRC17|10234|leucine rich repeat containing 17##AK226021|LRRC17|10234|leucine rich repeat containing 17##AK225701|LRRC17|10234|leucine rich repeat containing 17##U32907|LRRC17|10234|leucine rich repeat containing 17##AK290305|LRRC17|10234|leucine rich repeat containing 17##BC027903|LRRC17|10234|leucine rich repeat containing 17##AY358889|LRRC17|10234|leucine rich repeat containing 17##NM_001145268|FAM185A|222234|family with sequence similarity 185, member A##NM_001145269|FAM185A|222234|family with sequence similarity 185, member A##BC029175|FAM185A|222234|family with sequence similarity 185, member A##AK297455|FAM185A|222234|family with sequence similarity 185, member A##AK298753|FAM185A|222234|family with sequence similarity 185, member A##AK054745|FAM185A|222234|family with sequence similarity 185, member A##DQ893359|FAM185A|222234|family with sequence similarity 185, member A##DQ896678|FAM185A|222234|family with sequence similarity 185, member A##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK097537|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_145032|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY359238|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY359239|FBXL13|222235|F-box and leucine-rich repeat protein 13##AK095387|FBXL13|222235|F-box and leucine-rich repeat protein 13##BC031285|FBXL13|222235|F-box and leucine-rich repeat protein 13##BC026121|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_001111038|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY150851|ARMC10|83787|armadillo repeat containing 10##AY150852|ARMC10|83787|armadillo repeat containing 10##AY150853|ARMC10|83787|armadillo repeat containing 10##AY150854|ARMC10|83787|armadillo repeat containing 10##NM_001161009|ARMC10|83787|armadillo repeat containing 10##NM_001161010|ARMC10|83787|armadillo repeat containing 10##NM_001161011|ARMC10|83787|armadillo repeat containing 10##NM_001161012|ARMC10|83787|armadillo repeat containing 10##NM_001161013|ARMC10|83787|armadillo repeat containing 10##NM_031905|ARMC10|83787|armadillo repeat containing 10	0.012278	
chr8	118875879	118876028	reg1040372.p1	4.528	+	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	-342911	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	-342995	+	NM_001172814 NM_173851	-728617	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	248008	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	758172	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	758254	-	BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##NM_080651|MED30|90390|mediator complex subunit 30##NM_001172814|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_173851|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12	0.023936	
chr9	130887383	130887531	reg1033188.p1	4.528	+	NM_052901 TSC_hg19_v1_chr9_+_130860820 BC103930 BC103931 BC103932 BC103933 AJ619989 AJ619992 NM_001006643	-26632	+	BC089448 TSC_hg19_v1_chr9_+_130860793 AK290705	-26676	+	NM_001006642 AJ619991	-33323	+	TSC_hg19_v1_chr9_-_130889968 BC009397	2516	-	BC009456 AB463194 AM392565 DQ891904 DQ895090 TSC_hg19_v1_chr9_-_130890006 AK223520	2542	-	AK024100 TSC_hg19_v1_chr9_-_130890009	2551	-	NM_052901|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103930|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103931|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103932|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103933|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619989|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619992|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006643|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC089448|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AK290705|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006642|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC009397|PTGES2|80142|prostaglandin E synthase 2##BC009456|PTGES2|80142|prostaglandin E synthase 2##AM392565|PTGES2|80142|prostaglandin E synthase 2##DQ891904|PTGES2|80142|prostaglandin E synthase 2##DQ895090|PTGES2|80142|prostaglandin E synthase 2##AK223520|PTGES2|80142|prostaglandin E synthase 2##AK024100|PTGES2|80142|prostaglandin E synthase 2	0.0	
chr9	20611783	20611945	reg1032923.p1	4.528	+	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-824913	-	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-1202861	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-1231637	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	10584	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	10632	-	AK056522 AY139834 NM_017794	46443	+	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797	0.0	
chr13	28286690	28286800	reg1029054.p1	4.527	+	AK000623 TSC_hg19_v1_chr13_+_28196032 AB464657 AB527907 CU677257	-90671	+	TSC_hg19_v1_chr13_+_28196028 AF077044 AK097973 AK311833	-90719	+	TSC_hg19_v1_chr13_+_28196018 BC054519	-90725	+	AB044157 NM_145657 AB463700	80056	+	TSC_hg19_v1_chr13_+_28494136 NM_000209 X99894 U30329 U35632 AB464648	207459	+	CU677005 AB463470 DQ893626 EU176674 U51096 TSC_hg19_v1_chr13_-_28543282	256467	-	AK000623|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AF077044|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK097973|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK311833|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##BC054519|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AB044157|GSX1|219409|GS homeobox 1##NM_145657|GSX1|219409|GS homeobox 1##NM_000209|PDX1|3651|pancreatic and duodenal homeobox 1##X99894|PDX1|3651|pancreatic and duodenal homeobox 1##U30329|PDX1|3651|pancreatic and duodenal homeobox 1##U35632|PDX1|3651|pancreatic and duodenal homeobox 1##DQ893626|CDX2|1045|caudal type homeobox 2##EU176674|CDX2|1045|caudal type homeobox 2##U51096|CDX2|1045|caudal type homeobox 2	0.019931	
chr1	44229432	44229613	reg1001636.p2	4.527	+	AK301829 AY051143 NM_006279 NM_174963 NM_174964 NM_174965 NM_174966 NM_174967 NM_174968 NM_174969 NM_174970 NM_174971 TSC_hg19_v1_chr1_+_44173217 BC050380	-56304	+	TSC_hg19_v1_chr1_-_44173037 BC094867	-56499	-	BC002558 TSC_hg19_v1_chr1_+_44115828 AB014577	-113678	+	AF120274 NM_001136215 NM_057090 NM_057091	169469	+	TSC_hg19_v1_chr1_+_44412483 NM_014652	182939	+	TSC_hg19_v1_chr1_+_44412625 AB018267	183088	+	AK301829|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##AY051143|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_006279|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174963|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174964|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174965|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174966|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174967|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174968|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174969|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174970|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174971|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC050380|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC094867|LOC100132774|100132774|uncharacterized LOC100132774##BC002558|KDM4A|9682|lysine (K)-specific demethylase 4A##AB014577|KDM4A|9682|lysine (K)-specific demethylase 4A##AF120274|ARTN|9048|artemin##NM_001136215|ARTN|9048|artemin##NM_057090|ARTN|9048|artemin##NM_057091|ARTN|9048|artemin##NM_014652|IPO13|9670|importin 13##AB018267|IPO13|9670|importin 13	0.0	
chr14	68677747	68677927	reg1028934.p2	4.527	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-391317	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-394538	-	AK315462 NM_152443	-509235	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	581883	-	NM_001244698 NM_004926	582793	-	NM_001244701 AB528867	585147	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr20	11248087	11248266	reg1028505.p1	4.527	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-593607	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	-593972	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-832200	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	623273	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	650381	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	1741465	+	BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3	0.0	
chr3	179468666	179468781	reg1028641.p1	4.527	+	TSC_hg19_v1_chr3_+_179370901 NM_003940 U75362 BC016146 AK290338 AM393315 AM393392 AM393610 AM393780 DQ892472 DQ895684	-97828	+	TSC_hg19_v1_chr3_+_179322594 NM_001199957 NM_001199958 NM_002492 BX648034 BC005271 BC009796 AK313822 AF047181 BC093071 BC017909 CU679497	-146130	+	AY212270 BC032522 TSC_hg19_v1_chr3_-_179322427 BC021575 NM_020409 NM_177988	-146301	-	AB032593 NM_016559 AB032592 TSC_hg19_v1_chr3_-_179754937 AK299633 AK294501 AK314283 BC036183	286003	-	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	851280	+	AB075860 TSC_hg19_v1_chr3_+_180320970	852240	+	NM_003940|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##U75362|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##BC016146|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AK290338|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393315|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393392|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393610|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393780|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ892472|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ895684|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##NM_001199957|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_001199958|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AY212270|MRPL47|57129|mitochondrial ribosomal protein L47##BC032522|MRPL47|57129|mitochondrial ribosomal protein L47##BC021575|MRPL47|57129|mitochondrial ribosomal protein L47##NM_020409|MRPL47|57129|mitochondrial ribosomal protein L47##NM_177988|MRPL47|57129|mitochondrial ribosomal protein L47##AB032593|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_016559|PEX5L|51555|peroxisomal biogenesis factor 5-like##AB032592|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK299633|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK294501|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK314283|PEX5L|51555|peroxisomal biogenesis factor 5-like##BC036183|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##AB075860|TTC14|151613|tetratricopeptide repeat domain 14	0.948636	CTCF.p2:8:0.949
chr6	107739468	107739594	reg1028989.p1	4.527	+	BC131628 NM_001080450	-303896	-	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	-390059	+	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	-662034	+	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	41199	-	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	71897	+	AK303562 AK074125 TSC_hg19_v1_chr6_-_108145518 AK093571 AX748208 NM_198081	405985	-	BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203##NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)##AK303562|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK074125|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK093571|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_198081|SCML4|256380|sex comb on midleg-like 4 (Drosophila)	0.039455	
chr11	58347140	58347291	reg1027618.p1	4.526	+	TSC_hg19_v1_chr11_+_58346697 AB056107 AB057443 CU690828	-520	+	TSC_hg19_v1_chr11_+_58346591 BC051743 NM_001197051 NM_053023	-632	+	BC034230 TSC_hg19_v1_chr11_-_58345666 AK300955 NM_001143995 AK299264	-1554	-	BC069167 NM_000614 BC068030 AK314118 BC074963 BC074964 CU686605 S72921	42970	+	AF023466 BC009785 NM_005838 NM_201648	152192	-	BC021682 NM_145016 BC016789	264773	-	AB056107|ZFP91|80829|zinc finger protein 91 homolog (mouse)##AB057443|ZFP91-CNTF|386607|ZFP91-CNTF readthrough##BC051743|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_001197051|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_053023|ZFP91|80829|zinc finger protein 91 homolog (mouse)##BC034230|LPXN|9404|leupaxin##AK300955|LPXN|9404|leupaxin##NM_001143995|LPXN|9404|leupaxin##AK299264|LPXN|9404|leupaxin##BC069167|CNTF|1270|ciliary neurotrophic factor##NM_000614|CNTF|1270|ciliary neurotrophic factor##BC068030|CNTF|1270|ciliary neurotrophic factor##AK314118|CNTF|1270|ciliary neurotrophic factor##BC074963|CNTF|1270|ciliary neurotrophic factor##BC074964|CNTF|1270|ciliary neurotrophic factor##S72921|CNTF|1270|ciliary neurotrophic factor##AF023466|GLYAT|10249|glycine-N-acyltransferase##BC009785|GLYAT|10249|glycine-N-acyltransferase##NM_005838|GLYAT|10249|glycine-N-acyltransferase##NM_201648|GLYAT|10249|glycine-N-acyltransferase##BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2	0.934662	CTCF.p2:-11:0.935
chr17	17946911	17947054	reg1036420.p1	4.526	+	TSC_hg19_v1_chr17_+_17942750 BC041829 NM_024052 AK315083 AK074284 AK127580 BC000636	-4175	+	AM393241 CU678578 CU689282 AB528073 AF070584 BC032126 AF052185 AY203943 TSC_hg19_v1_chr17_-_17942481 BC004114 NM_145691 AK290257 AK294487 AK296382	-4579	-	NM_001130090 NM_001130091 NM_001130092 NM_031294 TSC_hg19_v1_chr17_+_17876186 BC047873 AL136926 AK293011 BC040276 BC050419 BC050665 AK093317 AX748051	-70782	+	TSC_hg19_v1_chr17_+_17991289 AK313362 BC062572 BC000493 NM_001388 AK297569 X80754 AK295575 DQ890768 DQ893929 BT006976	44286	+	AF144094 NM_016239	65037	+	TSC_hg19_v1_chr17_+_18086815 NM_017758	139857	+	BC041829|C17orf39|79018|chromosome 17 open reading frame 39##NM_024052|C17orf39|79018|chromosome 17 open reading frame 39##AK315083|C17orf39|79018|chromosome 17 open reading frame 39##AK074284|C17orf39|79018|chromosome 17 open reading frame 39##AK127580|C17orf39|79018|chromosome 17 open reading frame 39##BC000636|C17orf39|79018|chromosome 17 open reading frame 39##AM393241|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF070584|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC032126|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF052185|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AY203943|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC004114|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_145691|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK290257|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK294487|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_001130090|LRRC48|83450|leucine rich repeat containing 48##NM_001130091|LRRC48|83450|leucine rich repeat containing 48##NM_001130092|LRRC48|83450|leucine rich repeat containing 48##NM_031294|LRRC48|83450|leucine rich repeat containing 48##BC047873|LRRC48|83450|leucine rich repeat containing 48##AL136926|LRRC48|83450|leucine rich repeat containing 48##AK293011|LRRC48|83450|leucine rich repeat containing 48##BC040276|LRRC48|83450|leucine rich repeat containing 48##BC050419|LRRC48|83450|leucine rich repeat containing 48##BC050665|LRRC48|83450|leucine rich repeat containing 48##AK093317|LRRC48|83450|leucine rich repeat containing 48##AK313362|DRG2|1819|developmentally regulated GTP binding protein 2##BC062572|DRG2|1819|developmentally regulated GTP binding protein 2##BC000493|DRG2|1819|developmentally regulated GTP binding protein 2##NM_001388|DRG2|1819|developmentally regulated GTP binding protein 2##AK297569|DRG2|1819|developmentally regulated GTP binding protein 2##X80754|DRG2|1819|developmentally regulated GTP binding protein 2##AK295575|DRG2|1819|developmentally regulated GTP binding protein 2##DQ890768|DRG2|1819|developmentally regulated GTP binding protein 2##DQ893929|DRG2|1819|developmentally regulated GTP binding protein 2##BT006976|DRG2|1819|developmentally regulated GTP binding protein 2##AF144094|MYO15A|51168|myosin XVA##NM_016239|MYO15A|51168|myosin XVA##NM_017758|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)	0.12017	
chr17	66255328	66255508	reg1024437.p2	4.526	+	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	-84	+	TSC_hg19_v1_chr17_+_66244233 AF208856	-11175	+	NM_001033569 NM_001033570 NM_001033571 NM_001033572 NM_001033574 NM_016627 TSC_hg19_v1_chr17_+_66244216 BC056271 BC050709	-11238	+	AX750577 AX750581 U79745 AK313121 AK290417 BC064832 NM_001174166 NM_004694	31912	-	AY691424 CU691786 TSC_hg19_v1_chr17_-_66453638 BC039867 AK301830 AK000917 NM_017983	198193	-	TSC_hg19_v1_chr17_+_66508140 NM_212471 Y07642	252705	+	AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G##NM_001033569|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033570|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033571|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033572|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033574|AMZ2|51321|archaelysin family metallopeptidase 2##NM_016627|AMZ2|51321|archaelysin family metallopeptidase 2##BC056271|AMZ2|51321|archaelysin family metallopeptidase 2##BC050709|AMZ2|51321|archaelysin family metallopeptidase 2##AX750581|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AY691424|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##BC039867|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK301830|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK000917|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_017983|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_212471|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##Y07642|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	0.0	
chr19	15543587	15543733	reg1026052.p1	4.526	+	AK122890 TSC_hg19_v1_chr19_-_15543534	-115	-	TSC_hg19_v1_chr19_-_15529834 NM_014371 AK295956	-13826	-	DQ891853 DQ895043 TSC_hg19_v1_chr19_-_15529792 AB015332 AB025905 AJ243467 BC000713 AK001594 AK094736 AK225046 AK225291 AK310990	-13885	-	AK131404 NM_021241 TSC_hg19_v1_chr19_-_15560872	17158	-	AK024488 TSC_hg19_v1_chr19_-_15575356 AK122587 NM_022904	31707	-	BC136551 BC136552 BC144238 AF384856 AY358156 TSC_hg19_v1_chr19_-_15590313 AK289415 AB073610 AK055882 NM_052890	46599	-	AK122890|WIZ|58525|widely interspaced zinc finger motifs##NM_014371|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK295956|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##DQ891853|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##DQ895043|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AB015332|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AB025905|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AJ243467|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##BC000713|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK001594|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK094736|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK225046|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK225291|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK310990|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK131404|WIZ|58525|widely interspaced zinc finger motifs##NM_021241|WIZ|58525|widely interspaced zinc finger motifs##AK024488|RASAL3|64926|RAS protein activator like 3##AK122587|RASAL3|64926|RAS protein activator like 3##NM_022904|RASAL3|64926|RAS protein activator like 3##BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2##BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2##BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2##AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2##AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2##AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2##AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2##AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2##NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2	0.0	
chr4	4543753	4543934	reg1030399.p1	4.526	+	TSC_hg19_v1_chr4_-_4543750 NM_016930	-82	-	TSC_hg19_v1_chr4_-_4543741 AK310026	-112	-	AY453396 BT007150 BT020135 CU677069 AB028741 BC014613 BC071980 TSC_hg19_v1_chr4_-_4543708	-139	-	TSC_hg19_v1_chr4_+_4543925 BC025734	41	+	TSC_hg19_v1_chr4_+_4861391 NM_002448 AK290636 M97676 BC021285	317555	+	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	477303	-	NM_016930|STX18|53407|syntaxin 18##AK310026|STX18|53407|syntaxin 18##AY453396|STX18|53407|syntaxin 18##BT007150|STX18|53407|syntaxin 18##BT020135|STX18|53407|syntaxin 18##AB028741|STX18|53407|syntaxin 18##BC014613|STX18|53407|syntaxin 18##BC071980|STX18|53407|syntaxin 18##BC025734|LOC100507266|100507266|uncharacterized LOC100507266##NM_002448|MSX1|4487|msh homeobox 1##AK290636|MSX1|4487|msh homeobox 1##M97676|MSX1|4487|msh homeobox 1##BC021285|MSX1|4487|msh homeobox 1##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1	0.0	
chr5	180611274	180611434	reg1027700.p1	4.526	+	NM_206880	-29412	+	AK298113 TSC_hg19_v1_chr5_+_180467271 BC062459	-144039	+	NM_152547 TSC_hg19_v1_chr5_+_180467233 AK057097 AY358358	-144117	+	AF396655 NM_203297	16575	-	AF396652 AF396653 NM_203294 NM_203295 NM_203296	19985	-	DQ892585 DQ895803 BC080553 BC011567 AK314872 AF396651 AX776005 BC132863 BC132867 NM_033342 NM_203293 TSC_hg19_v1_chr5_-_180632192 AF220032	20847	-	NM_206880|OR2V2|285659|olfactory receptor, family 2, subfamily V, member 2##AK298113|BTNL9|153579|butyrophilin-like 9##BC062459|BTNL9|153579|butyrophilin-like 9##NM_152547|BTNL9|153579|butyrophilin-like 9##AK057097|BTNL9|153579|butyrophilin-like 9##AY358358|BTNL9|153579|butyrophilin-like 9##AF396655|TRIM7|81786|tripartite motif containing 7##NM_203297|TRIM7|81786|tripartite motif containing 7##AF396652|TRIM7|81786|tripartite motif containing 7##AF396653|TRIM7|81786|tripartite motif containing 7##NM_203294|TRIM7|81786|tripartite motif containing 7##NM_203295|TRIM7|81786|tripartite motif containing 7##NM_203296|TRIM7|81786|tripartite motif containing 7##DQ892585|TRIM7|81786|tripartite motif containing 7##DQ895803|TRIM7|81786|tripartite motif containing 7##BC080553|TRIM7|81786|tripartite motif containing 7##BC011567|TRIM7|81786|tripartite motif containing 7##AK314872|TRIM7|81786|tripartite motif containing 7##AF396651|TRIM7|81786|tripartite motif containing 7##BC132863|TRIM7|81786|tripartite motif containing 7##BC132867|TRIM7|81786|tripartite motif containing 7##NM_033342|TRIM7|81786|tripartite motif containing 7##NM_203293|TRIM7|81786|tripartite motif containing 7##AF220032|TRIM7|81786|tripartite motif containing 7	0.248269	CTCF.p2:-84:0.221
chr12	110662218	110662323	reg1032182.p1	4.525	+	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	-100049	+	AK097461 NM_207435	-156771	-	TSC_hg19_v1_chr12_-_110486328 AK021447 BC041968	-175941	-	TSC_hg19_v1_chr12_+_110719041 NM_001681 NM_170665	56765	+	TSC_hg19_v1_chr12_+_110719528 M23114 BC035588 M23115 CU690124	57098	+	TSC_hg19_v1_chr12_-_110841470 BC098264 BC098295 BC098362 BC099732 BC111798 AF191340 BC148236 BC040130	179169	-	NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK097461|C12orf76|400073|chromosome 12 open reading frame 76##NM_207435|C12orf76|400073|chromosome 12 open reading frame 76##AK021447|C12orf76|400073|chromosome 12 open reading frame 76##BC041968|C12orf76|400073|chromosome 12 open reading frame 76##NM_001681|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_170665|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23114|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC035588|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23115|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC098264|ANAPC7|51434|anaphase promoting complex subunit 7##BC098295|ANAPC7|51434|anaphase promoting complex subunit 7##BC098362|ANAPC7|51434|anaphase promoting complex subunit 7##BC099732|ANAPC7|51434|anaphase promoting complex subunit 7##BC111798|ANAPC7|51434|anaphase promoting complex subunit 7##AF191340|ANAPC7|51434|anaphase promoting complex subunit 7##BC148236|ANAPC7|51434|anaphase promoting complex subunit 7##BC040130|ANAPC7|51434|anaphase promoting complex subunit 7	0.031384	
chr16	16119229	16119317	reg1026819.p1	4.525	+	TSC_hg19_v1_chr16_+_16043442 L05628 NM_004996 NM_019862 NM_019898 NM_019899 NM_019900 X78338	-75909	+	AL832498 TSC_hg19_v1_chr16_-_15982471	-136788	-	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	-136820	-	TSC_hg19_v1_chr16_+_16146613 HQ917065	27345	+	AF168791 AM711638 AM774324 BC050733 AF076622 BC131732 U66689 NM_001079528 NM_001171 AY078405 AK298295	198047	-	TSC_hg19_v1_chr16_+_16326401 NM_001004067	207124	+	L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##AL832498|FOPNL|123811|FGFR1OP N-terminal like##AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##AF168791|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM711638|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM774324|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC050733|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AF076622|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC131732|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001079528|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001171|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AY078405|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AK298295|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001004067|NOMO3|408050|NODAL modulator 3	0.418649	CTCF.p2:101:0.419
chr17	71267299	71267438	reg1028809.p1	4.525	+	BC157870 NM_001129885	-9350	-	BC005005 TSC_hg19_v1_chr17_+_71229423	-37978	+	TSC_hg19_v1_chr17_+_71228800 AY163812 NM_001100621 NM_001100622 NM_017941 AL136740 AK000728	-38562	+	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	40772	-	NM_001144952	372858	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	932447	+	BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##BC005005|C17orf80|55028|chromosome 17 open reading frame 80##AY163812|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100621|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100622|C17orf80|55028|chromosome 17 open reading frame 80##NM_017941|C17orf80|55028|chromosome 17 open reading frame 80##AL136740|C17orf80|55028|chromosome 17 open reading frame 80##AK000728|C17orf80|55028|chromosome 17 open reading frame 80##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38	0.0	
chr2	38782496	38782602	reg1030863.p1	4.525	+	TSC_hg19_v1_chr2_-_38604430 NM_001135673 NM_022374	-178118	-	TSC_hg19_v1_chr2_-_38604411 BC053508 AK026946 AK225190 AK303985 AK308894	-178145	-	AK316179 TSC_hg19_v1_chr2_-_38525609	-256980	-	TSC_hg19_v1_chr2_-_38829619 CU675994	47142	-	TSC_hg19_v1_chr2_-_38830012 AY236962	47443	-	TSC_hg19_v1_chr2_-_38830065 AY236963 BC017480 AK291462	47491	-	NM_001135673|ATL2|64225|atlastin GTPase 2##NM_022374|ATL2|64225|atlastin GTPase 2##BC053508|ATL2|64225|atlastin GTPase 2##AK026946|ATL2|64225|atlastin GTPase 2##AK225190|ATL2|64225|atlastin GTPase 2##AK303985|ATL2|64225|atlastin GTPase 2##AK308894|ATL2|64225|atlastin GTPase 2##AK316179|ATL2|64225|atlastin GTPase 2##AY236962|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AY236963|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##BC017480|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AK291462|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like	0.016401	
chr5	115912813	115912994	reg1018704.p1	4.525	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-2389	-	TSC_hg19_v1_chr5_+_115898220 D28352	-14679	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-492182	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2411335	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2493908	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2494262	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr5	59945154	59945261	reg1012091.p1	4.525	+	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	-161167	+	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	-161303	-	NM_001104631	-755587	-	TSC_hg19_v1_chr5_-_59995928 AF490257	50709	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	50758	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	194864	-	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF490257|DEPDC1B|55789|DEP domain containing 1B##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7	0.0	
chr1	1337477	1337595	reg1033845.p1	4.524	+	TSC_hg19_v1_chr1_+_1334900 BC104242 BC104243 BC112998 BC112999 AK297832 AK024040 BC005108 BC068600 BC080546	-2610	+	AL834441 AK074112 AK056120 AY037150 TSC_hg19_v1_chr1_-_1334695 BC016333 AY116620 AK225758 NM_001039577 NM_030937	-2852	-	NM_017900 TSC_hg19_v1_chr1_-_1310902	-26673	-	TSC_hg19_v1_chr1_-_1342628 BC059945 AB049644 AK000886 AK315794 BC014316 BC071836 BC098413 BC009515	5092	-	TSC_hg19_v1_chr1_-_1342671 AK301440 NM_017971	5145	-	BC094869 NM_001145210 NM_001243535 NM_001243536	19287	-	BC104242|LOC148413|148413|uncharacterized LOC148413##BC104243|LOC148413|148413|uncharacterized LOC148413##BC112998|LOC148413|148413|uncharacterized LOC148413##BC112999|LOC148413|148413|uncharacterized LOC148413##AK297832|LOC148413|148413|uncharacterized LOC148413##AK024040|LOC148413|148413|uncharacterized LOC148413##BC005108|LOC148413|148413|uncharacterized LOC148413##BC068600|LOC148413|148413|uncharacterized LOC148413##BC080546|LOC148413|148413|uncharacterized LOC148413##AL834441|CCNL2|81669|cyclin L2##AK074112|CCNL2|81669|cyclin L2##AK056120|CCNL2|81669|cyclin L2##AY037150|CCNL2|81669|cyclin L2##BC016333|CCNL2|81669|cyclin L2##AY116620|CCNL2|81669|cyclin L2##AK225758|CCNL2|81669|cyclin L2##NM_001039577|CCNL2|81669|cyclin L2##NM_030937|CCNL2|81669|cyclin L2##NM_017900|AURKAIP1|54998|aurora kinase A interacting protein 1##BC059945|MRPL20|55052|mitochondrial ribosomal protein L20##AB049644|MRPL20|55052|mitochondrial ribosomal protein L20##AK000886|MRPL20|55052|mitochondrial ribosomal protein L20##AK315794|MRPL20|55052|mitochondrial ribosomal protein L20##BC014316|MRPL20|55052|mitochondrial ribosomal protein L20##BC009515|MRPL20|55052|mitochondrial ribosomal protein L20##NM_017971|MRPL20|55052|mitochondrial ribosomal protein L20##BC094869|ANKRD65|441869|ankyrin repeat domain 65##NM_001145210|ANKRD65|441869|ankyrin repeat domain 65##NM_001243535|ANKRD65|441869|ankyrin repeat domain 65##NM_001243536|ANKRD65|441869|ankyrin repeat domain 65	0.939818	CTCF.p2:12:0.940
chr11	62092510	62092637	reg1029881.p1	4.524	+	HQ258026 AY236538 BC130639 BC130645 AY359052 NM_206998	-26064	-	BC067220 NM_002411 U33147 BC128252 BC128402 AY217100	-54915	+	NM_006551 BC069290 BC104840 BC104838	-82833	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	12252	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	12375	+	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	93963	+	HQ258026|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY236538|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130639|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC130645|SCGB1D4|404552|secretoglobin, family 1D, member 4##AY359052|SCGB1D4|404552|secretoglobin, family 1D, member 4##NM_206998|SCGB1D4|404552|secretoglobin, family 1D, member 4##BC067220|SCGB2A2|4250|secretoglobin, family 2A, member 2##NM_002411|SCGB2A2|4250|secretoglobin, family 2A, member 2##U33147|SCGB2A2|4250|secretoglobin, family 2A, member 2##BC128252|SCGB2A2|4250|secretoglobin, family 2A, member 2##BC128402|SCGB2A2|4250|secretoglobin, family 2A, member 2##AY217100|SCGB2A2|4250|secretoglobin, family 2A, member 2##NM_006551|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC069290|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104840|SCGB1D2|10647|secretoglobin, family 1D, member 2##BC104838|SCGB1D2|10647|secretoglobin, family 1D, member 2##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)	0.100766	
chr20	11361077	11361257	reg1031503.p2	4.524	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-706598	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	-706963	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-945191	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	510282	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	537390	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	1628474	+	BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3	0.438414	CTCF.p2:-92:0.246
chr20	3730500	3730641	reg1030729.p1	4.524	+	NM_001197327 NM_052970 AK297120 TSC_hg19_v1_chr20_+_3713341 AK301294 BC090857 BC110881 AK056712 BC117284 BC126263 BC143932	-17203	+	AF230073 BC141884 NM_023068	-42796	-	AY223855 AY223851 AY223850 AK095953 AK126498 AK304037 AF466287 AK123015 AK226148 BC125112 BC125113 AK300429 AY223853 AF466289 AB055891 AY223852 AY223854 NM_025220 NM_153202 AY358314 BC062663	-67810	-	TSC_hg19_v1_chr20_-_3748383 BC012196 AK124341 BC024036 AK000557 AK024220 AK225109 AK308520 BC069204 NM_001039140	17839	-	BC022476 AL080154 EF560745 NM_015417 AK313766	31516	-	BC012297 BC003649 TSC_hg19_v1_chr20_-_3765799 BC033658 BC040446	35273	-	NM_001197327|HSPA12B|116835|heat shock 70kD protein 12B##NM_052970|HSPA12B|116835|heat shock 70kD protein 12B##AK297120|HSPA12B|116835|heat shock 70kD protein 12B##AK301294|HSPA12B|116835|heat shock 70kD protein 12B##BC090857|HSPA12B|116835|heat shock 70kD protein 12B##BC110881|HSPA12B|116835|heat shock 70kD protein 12B##AK056712|HSPA12B|116835|heat shock 70kD protein 12B##BC117284|HSPA12B|116835|heat shock 70kD protein 12B##BC126263|HSPA12B|116835|heat shock 70kD protein 12B##BC143932|HSPA12B|116835|heat shock 70kD protein 12B##AF230073|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##BC141884|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##NM_023068|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##AY223855|ADAM33|80332|ADAM metallopeptidase domain 33##AY223851|ADAM33|80332|ADAM metallopeptidase domain 33##AY223850|ADAM33|80332|ADAM metallopeptidase domain 33##AK095953|ADAM33|80332|ADAM metallopeptidase domain 33##AK126498|ADAM33|80332|ADAM metallopeptidase domain 33##AK304037|ADAM33|80332|ADAM metallopeptidase domain 33##AF466287|ADAM33|80332|ADAM metallopeptidase domain 33##AK123015|ADAM33|80332|ADAM metallopeptidase domain 33##AK226148|ADAM33|80332|ADAM metallopeptidase domain 33##BC125112|ADAM33|80332|ADAM metallopeptidase domain 33##BC125113|ADAM33|80332|ADAM metallopeptidase domain 33##AK300429|ADAM33|80332|ADAM metallopeptidase domain 33##AY223853|ADAM33|80332|ADAM metallopeptidase domain 33##AF466289|ADAM33|80332|ADAM metallopeptidase domain 33##AB055891|ADAM33|80332|ADAM metallopeptidase domain 33##AY223852|ADAM33|80332|ADAM metallopeptidase domain 33##AY223854|ADAM33|80332|ADAM metallopeptidase domain 33##NM_025220|ADAM33|80332|ADAM metallopeptidase domain 33##NM_153202|ADAM33|80332|ADAM metallopeptidase domain 33##AY358314|ADAM33|80332|ADAM metallopeptidase domain 33##BC062663|ADAM33|80332|ADAM metallopeptidase domain 33##BC012196|C20orf27|54976|chromosome 20 open reading frame 27##AK124341|C20orf27|54976|chromosome 20 open reading frame 27##BC024036|C20orf27|54976|chromosome 20 open reading frame 27##AK000557|C20orf27|54976|chromosome 20 open reading frame 27##AK024220|C20orf27|54976|chromosome 20 open reading frame 27##AK225109|C20orf27|54976|chromosome 20 open reading frame 27##AK308520|C20orf27|54976|chromosome 20 open reading frame 27##BC069204|C20orf27|54976|chromosome 20 open reading frame 27##NM_001039140|C20orf27|54976|chromosome 20 open reading frame 27##BC022476|SPEF1|25876|sperm flagellar 1##AL080154|SPEF1|25876|sperm flagellar 1##EF560745|SPEF1|25876|sperm flagellar 1##NM_015417|SPEF1|25876|sperm flagellar 1##AK313766|SPEF1|25876|sperm flagellar 1##BC012297|CENPB|1059|centromere protein B, 80kDa##BC003649|CENPB|1059|centromere protein B, 80kDa##BC033658|CENPB|1059|centromere protein B, 80kDa##BC040446|CENPB|1059|centromere protein B, 80kDa	0.995854	CTCF.p2:-4:0.996
chr7	130406889	130406997	reg1030901.p1	4.524	+	AF294347 AF431815 BC038415 NM_052933	-35588	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-53348	-	TSC_hg19_v1_chr7_-_130353564 AF207598 AF157833	-53374	-	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	11984	-	TSC_hg19_v1_chr7_-_130792857 BC047367	385916	-	AK294384 NM_001145354	387911	+	AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##AF207598|COPG2|26958|coatomer protein complex, subunit gamma 2##AF157833|COPG2|26958|coatomer protein complex, subunit gamma 2##AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.941957	CTCF.p2:-9:0.942
chr7	151105833	151105990	reg1028473.p1	4.524	+	AK056624 TSC_hg19_v1_chr7_-_151071775	-34175	-	TSC_hg19_v1_chr7_+_151038909 AF459743 AY129295 AK293159 AF155099	-66997	+	TSC_hg19_v1_chr7_+_151038874 NM_001243351 NM_016118 AF300717	-67069	+	TSC_hg19_v1_chr7_-_151107122 NM_198285	1210	-	BC100878 BC100879 BC100880 BC100881 AF445455 NM_144727	31184	-	AB528681 AF493921 BT006958 CU688134 D78132 Z29677 TSC_hg19_v1_chr7_-_151216661	110718	-	AF459743|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AY129295|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AK293159|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF155099|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_001243351|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_016118|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF300717|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_198285|WDR86|349136|WD repeat domain 86##BC100878|CRYGN|155051|crystallin, gamma N##BC100879|CRYGN|155051|crystallin, gamma N##BC100880|CRYGN|155051|crystallin, gamma N##BC100881|CRYGN|155051|crystallin, gamma N##AF445455|CRYGN|155051|crystallin, gamma N##NM_144727|CRYGN|155051|crystallin, gamma N##AF493921|RHEB|6009|Ras homolog enriched in brain##BT006958|RHEB|6009|Ras homolog enriched in brain##D78132|RHEB|6009|Ras homolog enriched in brain##Z29677|RHEB|6009|Ras homolog enriched in brain	0.0	
chr8	115059376	115059464	reg1020348.p2	4.524	+	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	-610291	-	AB114605 NM_198124	-670039	-	BC028739 AK313469 AF167082 NM_014379 AK297393	-4072454	-	TSC_hg19_v1_chr8_-_116680208 AK304046	1620800	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	1621745	-	TSC_hg19_v1_chr8_-_116681365 AF183810	1621915	-	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I	0.997583	
chr11	10562772	10562893	reg1027190.p1	4.523	+	BC028123 TSC_hg19_v1_chr11_+_10562846	0	+	TSC_hg19_v1_chr11_-_10562724 AK289764 AF214680 BC018104 AK309367 NM_016422	-94	-	TSC_hg19_v1_chr11_-_10530735 NM_001190702	-32146	-	CU693164 DQ892040 DQ895232 AK300885 BC026231 AF118108 AF127670 TSC_hg19_v1_chr11_-_10590213 AY358925 AK075443 AK312462 NM_006691	27389	-	AK300358 NM_001098579 AF081249	111045	-	TSC_hg19_v1_chr11_-_10715063 AK301296 AK127209 NM_001100167 BC117127	152248	-	BC028123|MRVI1-AS1|100129827|MRVI1 antisense RNA 1 (non-protein coding)##AK289764|RNF141|50862|ring finger protein 141##AF214680|RNF141|50862|ring finger protein 141##BC018104|RNF141|50862|ring finger protein 141##AK309367|RNF141|50862|ring finger protein 141##NM_016422|RNF141|50862|ring finger protein 141##NM_001190702|MTRNR2L8|100463486|MT-RNR2-like 8##DQ892040|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##DQ895232|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK300885|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##BC026231|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AF118108|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AF127670|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AY358925|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK075443|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK312462|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##NM_006691|LYVE1|10894|lymphatic vessel endothelial hyaluronan receptor 1##AK300358|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001098579|MRVI1|10335|murine retrovirus integration site 1 homolog##AF081249|MRVI1|10335|murine retrovirus integration site 1 homolog##AK301296|MRVI1|10335|murine retrovirus integration site 1 homolog##AK127209|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001100167|MRVI1|10335|murine retrovirus integration site 1 homolog##BC117127|MRVI1|10335|murine retrovirus integration site 1 homolog	0.045107	
chr11	69656991	69657088	reg1029245.p2	4.523	+	NM_005247	-22848	-	M17446 NM_002007	-66869	-	AF110400 AY358302 NM_005117	-137934	-	AY728143 NM_018043 TSC_hg19_v1_chr11_+_69924473	267401	+	NM_003824 TSC_hg19_v1_chr11_+_70049420 AK291005 AK293320 BC000334 X84709 U24231 BC025733 EU176185 AB587588 AY423721 BT006927 CR456738	392377	+	TSC_hg19_v1_chr11_+_70116795 NM_003626 NM_177423	459765	+	NM_005247|FGF3|2248|fibroblast growth factor 3##M17446|FGF4|2249|fibroblast growth factor 4##NM_002007|FGF4|2249|fibroblast growth factor 4##AF110400|FGF19|9965|fibroblast growth factor 19##AY358302|FGF19|9965|fibroblast growth factor 19##NM_005117|FGF19|9965|fibroblast growth factor 19##AY728143|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_018043|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_003824|FADD|8772|Fas (TNFRSF6)-associated via death domain##AK291005|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC000334|FADD|8772|Fas (TNFRSF6)-associated via death domain##X84709|FADD|8772|Fas (TNFRSF6)-associated via death domain##U24231|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC025733|FADD|8772|Fas (TNFRSF6)-associated via death domain##EU176185|FADD|8772|Fas (TNFRSF6)-associated via death domain##AY423721|FADD|8772|Fas (TNFRSF6)-associated via death domain##BT006927|FADD|8772|Fas (TNFRSF6)-associated via death domain##CR456738|FADD|8772|Fas (TNFRSF6)-associated via death domain##NM_003626|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##NM_177423|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1	1.179575	CTCF.p2:15:0.999
chr12	132258194	132258353	reg1030459.p1	4.523	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	-62617	+	TSC_hg19_v1_chr12_+_132195623 BC142980	-62660	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-819820	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	54693	+	TSC_hg19_v1_chr12_+_132379266 AF045458 NM_003565	121000	+	TSC_hg19_v1_chr12_+_132413775 NM_001002020 AK292242	155486	+	BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AF045458|ULK1|8408|unc-51-like kinase 1 (C. elegans)##NM_003565|ULK1|8408|unc-51-like kinase 1 (C. elegans)##NM_001002020|PUS1|80324|pseudouridylate synthase 1##AK292242|PUS1|80324|pseudouridylate synthase 1	0.0	
chr1	35325421	35325552	reg1031298.p1	4.523	+	BX648912 BC107421 NM_001164825 TSC_hg19_v1_chr1_-_35325339 BC011880 BC073851 AK074853 BC064320 NM_138428	-111	-	NM_001164824 BC034598	-829	-	NM_002060 AK291563 AK313477 BC072389 BC027889 M96789	-66877	+	BC141907 TSC_hg19_v1_chr1_+_35331580	6071	+	NM_001080418 AB527430	45498	-	TSC_hg19_v1_chr1_-_35450919 CU688652 BC042172 BC029439	125424	-	BX648912|C1orf212|113444|chromosome 1 open reading frame 212##BC107421|C1orf212|113444|chromosome 1 open reading frame 212##NM_001164825|C1orf212|113444|chromosome 1 open reading frame 212##BC011880|C1orf212|113444|chromosome 1 open reading frame 212##BC073851|C1orf212|113444|chromosome 1 open reading frame 212##AK074853|C1orf212|113444|chromosome 1 open reading frame 212##BC064320|C1orf212|113444|chromosome 1 open reading frame 212##NM_138428|C1orf212|113444|chromosome 1 open reading frame 212##NM_001164824|C1orf212|113444|chromosome 1 open reading frame 212##BC034598|C1orf212|113444|chromosome 1 open reading frame 212##NM_002060|GJA4|2701|gap junction protein, alpha 4, 37kDa##AK291563|GJA4|2701|gap junction protein, alpha 4, 37kDa##BC072389|GJA4|2701|gap junction protein, alpha 4, 37kDa##BC027889|GJA4|2701|gap junction protein, alpha 4, 37kDa##M96789|GJA4|2701|gap junction protein, alpha 4, 37kDa##NM_001080418|DLGAP3|58512|discs, large (Drosophila) homolog-associated protein 3##BC029439|ZMYM6NB|100506144|ZMYM6 neighbor	0.960357	CTCF.p2:18:0.960
chr14	61870212	61870371	reg1028213.p1	4.523	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-81764	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-121769	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-122097	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	291899	+	FJ790247 NM_001243084	294048	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	358828	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.0	
chr15	77306858	77307035	reg1030194.p1	4.523	+	TSC_hg19_v1_chr15_+_77287743 AK310072 AB451310 AB451440 AF038602 AF038603 DQ891779 DQ894963 AB528365	-19119	+	AK304052 U94778 AK316220 TSC_hg19_v1_chr15_+_77287720 AK298733	-19240	+	TSC_hg19_v1_chr15_+_77287465 AK309856 NM_003978 AK310126 BC008602	-19456	+	TSC_hg19_v1_chr15_-_77363389 AF054840 CU674348 AB529127 AF133423 AK293677 AK001310 AK001305 BC004280 BC009248 AK075336 AK075482 AK095520 AK298157	56340	-	TSC_hg19_v1_chr15_-_77363454 BC011206 BC000704 AK001326	56537	-	TSC_hg19_v1_chr15_-_77363522 NM_001168412 NM_005724 NM_198902	56598	-	AK310072|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451310|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451440|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038603|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ891779|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ894963|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF054840|TSPAN3|10099|tetraspanin 3##AF133423|TSPAN3|10099|tetraspanin 3##AK293677|TSPAN3|10099|tetraspanin 3##AK001310|TSPAN3|10099|tetraspanin 3##AK001305|TSPAN3|10099|tetraspanin 3##BC004280|TSPAN3|10099|tetraspanin 3##BC009248|TSPAN3|10099|tetraspanin 3##AK075336|TSPAN3|10099|tetraspanin 3##AK075482|TSPAN3|10099|tetraspanin 3##AK298157|TSPAN3|10099|tetraspanin 3##BC011206|TSPAN3|10099|tetraspanin 3##BC000704|TSPAN3|10099|tetraspanin 3##AK001326|TSPAN3|10099|tetraspanin 3##NM_001168412|TSPAN3|10099|tetraspanin 3##NM_005724|TSPAN3|10099|tetraspanin 3##NM_198902|TSPAN3|10099|tetraspanin 3	0.0	
chr7	133701550	133701718	reg1031825.p1	4.523	+	TSC_hg19_v1_chr7_+_132937838 NM_001037126 NM_021807 AF380839 AK027688 AL831989 AK298191 BC067263 BC026174 CU693148 AB051486	-763785	+	TSC_hg19_v1_chr7_-_132766851 BC011596 BC014839 AK129533	-934788	-	AB528286 TSC_hg19_v1_chr7_-_132766813 AK294071 AK000427 NM_017812 AK310236	-934870	-	BC104897 BC104899 AK057348 NM_144648	110443	+	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	299989	-	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	300153	-	NM_001037126|EXOC4|60412|exocyst complex component 4##NM_021807|EXOC4|60412|exocyst complex component 4##AF380839|EXOC4|60412|exocyst complex component 4##AK027688|EXOC4|60412|exocyst complex component 4##AL831989|EXOC4|60412|exocyst complex component 4##AK298191|EXOC4|60412|exocyst complex component 4##BC067263|EXOC4|60412|exocyst complex component 4##BC026174|EXOC4|60412|exocyst complex component 4##AB051486|EXOC4|60412|exocyst complex component 4##BC011596|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC014839|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK129533|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK294071|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK000427|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##NM_017812|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK310236|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4	0.996626	CTCF.p2:-12:0.997
chr10	80612718	80612853	reg1029358.p1	4.522	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-819154	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-819229	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-823471	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	216003	+	TSC_hg19_v1_chr10_+_80899458 AK025812	286699	+	TSC_hg19_v1_chr10_+_81003207 AB033050	390345	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.932834	CTCF.p2:7:0.933
chr12	100052898	100053002	reg1031308.p1	4.522	+	NM_153364 AK312767 BC031221	-11420	+	AK294191 NM_001204067	-504083	-	BC026313 AF164792 BC142669 BC150204 AK289768 NM_001204068 NM_001204069 NM_001204070 NM_020140 NM_181670 BC068451 NM_001204066	-504393	-	NM_152788	325481	-	BC127017 AK125813 TSC_hg19_v1_chr12_-_100536637 BC014891	483599	-	TSC_hg19_v1_chr12_-_100536644 NM_001006947 NM_015054	483698	-	NM_153364|FAM71C|196472|family with sequence similarity 71, member C##AK312767|FAM71C|196472|family with sequence similarity 71, member C##BC031221|FAM71C|196472|family with sequence similarity 71, member C##AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC026313|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AF164792|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC142669|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC150204|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##AK289768|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204068|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204069|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204070|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_020140|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_181670|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC068451|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204066|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_152788|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC127017|UHRF1BP1L|23074|UHRF1 binding protein 1-like##AK125813|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC014891|UHRF1BP1L|23074|UHRF1 binding protein 1-like##NM_001006947|UHRF1BP1L|23074|UHRF1 binding protein 1-like##NM_015054|UHRF1BP1L|23074|UHRF1 binding protein 1-like	0.04622	
chr13	70139741	70139826	reg1030216.p1	4.522	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-2335279	-	AK289924 NM_022843	-8150129	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-8150530	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	542758	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	2300476	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	2300980	-	BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)	0.03901	
chr16	68390428	68390554	reg1031405.p2	4.522	+	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	-45532	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	-45665	-	TSC_hg19_v1_chr16_+_68298430 NM_001076785 NM_003983 CR749291 CR749475 AK310866 BC028216	-92041	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	91990	-	TSC_hg19_v1_chr16_+_68564035 BC040871	173542	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	182707	+	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_001076785|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##NM_003983|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749291|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749475|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK310866|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC028216|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)	0.0	
chr3	171757251	171757356	reg1025761.p1	4.522	+	NM_001164436 AK026825	-196155	+	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	-229048	-	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-579232	-	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	112	+	TSC_hg19_v1_chr3_+_171757437 AK127826	131	+	TSC_hg19_v1_chr3_+_171757442 AY358367	155	+	NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B##AK127826|FNDC3B|64778|fibronectin type III domain containing 3B##AY358367|FNDC3B|64778|fibronectin type III domain containing 3B	0.0	
chr3	197121412	197121593	reg1023953.p1	4.522	+	BC140841 BC144651 TSC_hg19_v1_chr3_-_197025506 AK304280 NM_001098424 NM_001204386 NM_004087 U13896 U13897 AK310596	-96028	-	TSC_hg19_v1_chr3_-_197024987 BC015560 BC028486 AK310893	-96569	-	AK294855 NM_001204387 NM_001204388	-210501	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	161340	-	NM_203315 TSC_hg19_v1_chr3_-_197300209	178699	-	TSC_hg19_v1_chr3_-_197354756 BC067856 AK309924 BC094848 AK299863 BC080518 AK311713	233251	-	BC140841|DLG1|1739|discs, large homolog 1 (Drosophila)##BC144651|DLG1|1739|discs, large homolog 1 (Drosophila)##AK304280|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001098424|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204386|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_004087|DLG1|1739|discs, large homolog 1 (Drosophila)##U13896|DLG1|1739|discs, large homolog 1 (Drosophila)##U13897|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310596|DLG1|1739|discs, large homolog 1 (Drosophila)##BC015560|DLG1|1739|discs, large homolog 1 (Drosophila)##BC028486|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310893|DLG1|1739|discs, large homolog 1 (Drosophila)##AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203315|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC067856|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK309924|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC094848|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK299863|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC080518|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK311713|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene	0.0	
chr3	99472170	99472348	reg1003889.p1	4.522	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	-114809	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-851767	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-1020672	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	64486	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	122732	-	BC017987 NM_001042459 NM_182909 AF329092 AX776292	361093	-	AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like	0.0	
chr4	40371810	40371949	reg1038616.p1	4.522	+	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	-34434	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-173238	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-313347	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	144705	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	146079	-	TSC_hg19_v1_chr4_-_40631882 BC034402 BC071585 NM_001098634	259986	-	BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47##BC034402|RBM47|54502|RNA binding motif protein 47##BC071585|RBM47|54502|RNA binding motif protein 47##NM_001098634|RBM47|54502|RNA binding motif protein 47	0.0	
chr4	55250907	55251000	reg1025749.p1	4.522	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-155489	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-155673	+	AB028838 EU596451 NM_133267	-284731	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	273181	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	740801	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	961463	+	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB028838|GSX2|170825|GS homeobox 2##EU596451|GSX2|170825|GS homeobox 2##NM_133267|GSX2|170825|GS homeobox 2##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3	0.999655	CTCF.p2:-9:1.000
chr7	137670774	137670917	reg1026148.p2	4.522	+	NM_001243523	-32752	+	TSC_hg19_v1_chr7_-_137620668 BC015585	-50183	-	TSC_hg19_v1_chr7_+_137531690 BC047556	-139113	+	AK293048 BC110813 TSC_hg19_v1_chr7_-_137686800 BC063666 AJ549092 AJ549387	15949	-	AK131517 TSC_hg19_v1_chr7_-_137686812	15967	-	TSC_hg19_v1_chr7_-_137686833 NM_001253775 NM_194071	16007	-	NM_001243523|LOC100130880|100130880|uncharacterized LOC100130880##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK293048|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC110813|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC063666|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549092|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549387|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK131517|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_001253775|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_194071|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.043118	
chr8	142397308	142397452	reg1015766.p1	4.522	+	NM_005293	-20016	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	-133190	-	AK128212 NM_001080431	-158708	-	TSC_hg19_v1_chr8_+_142402120 AK311257	4754	+	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	34681	+	BC144560 AK125848 AK131461 NM_207414	119937	-	NM_005293|GPR20|2843|G protein-coupled receptor 20##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein	0.0	
chr12	2504684	2504790	reg1030275.p2	4.521	+	AB209016 AJ224873 AY830711 AY830712 AY830713 Z34809 Z34810 Z34811 Z34812 Z34813 Z34814 Z34815 Z34816 Z34817 Z34818 Z34819 Z34820 Z34821 Z34822 Z74996 TSC_hg19_v1_chr12_+_2162753	-342009	+	TSC_hg19_v1_chr12_+_2162452 NM_000719 NM_001129827 NM_001129829 NM_001129830 NM_001129831 NM_001129832 NM_001129833 NM_001129834 NM_001129835 NM_001129836 NM_001129837 NM_001129838 NM_001129839 NM_001129840 NM_001129841 NM_001129842 NM_001129843 NM_001129844 NM_001129846 NM_001167623 NM_001167624 NM_001167625 NM_199460 AK309111 AF465484 AK308652 BC146846	-342243	+	TSC_hg19_v1_chr12_-_2113622 AB463561 AK301109 AK056200 AK299203 BC043437 AY146652 NM_152640	-391066	-	TSC_hg19_v1_chr12_+_2904161 NM_002014 AK313918 BC001786 M88279 BC007924	399417	+	TSC_hg19_v1_chr12_+_2904310 AB385011 CU674888 DQ893668 DQ895800	399565	+	NM_018463 TSC_hg19_v1_chr12_+_2921842 AK130319 AK297189 AK291110 AK300905 AK027483 BC006552 BC013399 DQ892711 DQ895963 CU675449 AY599883	417119	+	AB209016|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AJ224873|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830711|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830712|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AY830713|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34809|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34810|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34811|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34812|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34813|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34814|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34815|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34816|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34817|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34818|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34819|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34820|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34821|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z34822|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##Z74996|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_000719|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129827|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129829|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129830|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129831|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129832|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129833|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129834|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129835|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129836|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129837|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129838|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129839|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129840|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129841|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129842|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129843|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129844|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001129846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167623|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167624|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_001167625|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##NM_199460|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK309111|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AF465484|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK308652|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##BC146846|CACNA1C|775|calcium channel, voltage-dependent, L type, alpha 1C subunit##AK301109|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK056200|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AK299203|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##BC043437|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##AY146652|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_152640|DCP1B|196513|DCP1 decapping enzyme homolog B (S. cerevisiae)##NM_002014|FKBP4|2288|FK506 binding protein 4, 59kDa##AK313918|FKBP4|2288|FK506 binding protein 4, 59kDa##BC001786|FKBP4|2288|FK506 binding protein 4, 59kDa##M88279|FKBP4|2288|FK506 binding protein 4, 59kDa##BC007924|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ893668|FKBP4|2288|FK506 binding protein 4, 59kDa##DQ895800|FKBP4|2288|FK506 binding protein 4, 59kDa##NM_018463|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK130319|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK297189|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK291110|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK300905|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AK027483|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC006552|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##BC013399|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ892711|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##DQ895963|ITFG2|55846|integrin alpha FG-GAP repeat containing 2##AY599883|ITFG2|55846|integrin alpha FG-GAP repeat containing 2	0.0	
chr15	83114053	83114152	reg1033446.p1	4.521	+	NM_198181 CR936812	-15361	+	CR936602 NM_001164465	-95924	-	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-169212	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	95134	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	126433	-	CU690752 BC050629 NM_030594	202572	-	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	0.0	
chr16	23888534	23888712	reg1025568.p1	4.521	+	AB587511 EU832791 GQ129253 TSC_hg19_v1_chr16_+_23847512	-41117	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	-41228	+	TSC_hg19_v1_chr16_+_23847321 BC036472	-41291	+	BC037899 NM_006539 AK095553	378251	+	AK055453 TSC_hg19_v1_chr16_+_24267474	378851	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	379075	+	EU832791|PRKCB|5579|protein kinase C, beta##GQ129253|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	0.152226	
chr17	73285738	73285883	reg1017374.p1	4.521	+	TSC_hg19_v1_chr17_-_73285501 AK075239 NM_001126121 NM_001126122 NM_021734	-281	-	BC001075 BC005120 TSC_hg19_v1_chr17_-_73285471 AL833387	-338	-	TSC_hg19_v1_chr17_-_73267265 AF225422 NM_001242498 NM_020679	-18496	-	AB385058 AF498925 CR450363 CR541942 DQ891830 DQ894923 CU674310 L29511 TSC_hg19_v1_chr17_-_73389844	103967	-	AK091010 TSC_hg19_v1_chr17_-_73401721	115834	-	TSC_hg19_v1_chr17_-_73401738 BC000631	115924	-	AK075239|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126121|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126122|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_021734|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC001075|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC005120|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AL833387|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AF225422|MIF4GD|57409|MIF4G domain containing##NM_001242498|MIF4GD|57409|MIF4G domain containing##NM_020679|MIF4GD|57409|MIF4G domain containing##AF498925|GRB2|2885|growth factor receptor-bound protein 2##CR450363|GRB2|2885|growth factor receptor-bound protein 2##CR541942|GRB2|2885|growth factor receptor-bound protein 2##DQ891830|GRB2|2885|growth factor receptor-bound protein 2##DQ894923|GRB2|2885|growth factor receptor-bound protein 2##L29511|GRB2|2885|growth factor receptor-bound protein 2##AK091010|GRB2|2885|growth factor receptor-bound protein 2##BC000631|GRB2|2885|growth factor receptor-bound protein 2	0.0	
chr18	46444604	46444749	reg1025836.p2	4.521	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-378903	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-508967	-	AM988836 AK296709 NM_001039360 EF120357	-780977	-	AK131394 NM_001190823	24471	-	AK301535 NM_001190822	31026	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	32091	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.0	
chr1	94147358	94147450	reg1028500.p1	4.521	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	-77	-	TSC_hg19_v1_chr1_+_94057602 BC084562	-89797	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-89864	+	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	197310	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	197344	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	227558	-	U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit	0.052332	
chr8	16689320	16689403	reg1031895.p1	4.521	+	TSC_hg19_v1_chr8_-_16050222 NM_002445 NM_138715 NM_138716	-639102	-	D90187 TSC_hg19_v1_chr8_-_16050161 AK293409 D90188	-639181	-	TSC_hg19_v1_chr8_+_15397771 U42349 BT020002 DQ892936 DQ896185	-1291511	+	AB030648 AB590732 BC096720 BC098128 BC098153 BC098339 BC127125 BC141979 BC141980 BC137446 BC137447 AB044277 NM_019851	170245	-	TSC_hg19_v1_chr8_+_16884746 NM_181723 BC045553 EU832320 EU832405 BC032868	195410	+	TSC_hg19_v1_chr8_+_17013493 BC050272	324150	+	NM_002445|MSR1|4481|macrophage scavenger receptor 1##NM_138715|MSR1|4481|macrophage scavenger receptor 1##NM_138716|MSR1|4481|macrophage scavenger receptor 1##D90187|MSR1|4481|macrophage scavenger receptor 1##AK293409|MSR1|4481|macrophage scavenger receptor 1##D90188|MSR1|4481|macrophage scavenger receptor 1##U42349|TUSC3|7991|tumor suppressor candidate 3##BT020002|TUSC3|7991|tumor suppressor candidate 3##DQ892936|TUSC3|7991|tumor suppressor candidate 3##DQ896185|TUSC3|7991|tumor suppressor candidate 3##AB030648|FGF20|26281|fibroblast growth factor 20##BC096720|FGF20|26281|fibroblast growth factor 20##BC098128|FGF20|26281|fibroblast growth factor 20##BC098153|FGF20|26281|fibroblast growth factor 20##BC098339|FGF20|26281|fibroblast growth factor 20##BC127125|FGF20|26281|fibroblast growth factor 20##BC141979|FGF20|26281|fibroblast growth factor 20##BC141980|FGF20|26281|fibroblast growth factor 20##BC137446|FGF20|26281|fibroblast growth factor 20##BC137447|FGF20|26281|fibroblast growth factor 20##AB044277|FGF20|26281|fibroblast growth factor 20##NM_019851|FGF20|26281|fibroblast growth factor 20##NM_181723|EFHA2|286097|EF-hand domain family, member A2##BC045553|EFHA2|286097|EF-hand domain family, member A2##EU832320|EFHA2|286097|EF-hand domain family, member A2##EU832405|EFHA2|286097|EF-hand domain family, member A2##BC032868|EFHA2|286097|EF-hand domain family, member A2##BC050272|ZDHHC2|51201|zinc finger, DHHC-type containing 2	0.0	
chr19	49005061	49005163	reg1036668.p1	4.520	+	TSC_hg19_v1_chr19_+_48972625 AB209573 BC038713 AK292405 U70728 AK299590 BC004361 AB528907 DQ892565 DQ896856 X99753	-32443	+	NM_004228 NM_017457 TSC_hg19_v1_chr19_+_48972572	-32594	+	BC035918 NM_170720	-40607	+	AB384647 TSC_hg19_v1_chr19_-_49014849	9728	-	AB067470 NM_001080434	11319	-	TSC_hg19_v1_chr19_+_49055432 NM_177973 U92315 BC034694 CU689942	50352	+	AB209573|CYTH2|9266|cytohesin 2##BC038713|CYTH2|9266|cytohesin 2##AK292405|CYTH2|9266|cytohesin 2##U70728|CYTH2|9266|cytohesin 2##AK299590|CYTH2|9266|cytohesin 2##BC004361|CYTH2|9266|cytohesin 2##DQ892565|CYTH2|9266|cytohesin 2##DQ896856|CYTH2|9266|cytohesin 2##X99753|CYTH2|9266|cytohesin 2##NM_004228|CYTH2|9266|cytohesin 2##NM_017457|CYTH2|9266|cytohesin 2##BC035918|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##NM_170720|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##AB067470|LMTK3|114783|lemur tyrosine kinase 3##NM_001080434|LMTK3|114783|lemur tyrosine kinase 3##NM_177973|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##U92315|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##BC034694|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1	0.0	
chr12	110283055	110283235	reg1016215.p1	4.519	+	BC117426 BC143307 BC143315 TSC_hg19_v1_chr12_-_110271207 AJ296305 NM_021625	-11937	-	TSC_hg19_v1_chr12_-_110271182 AL834192	-11958	-	AB073669 AB100308 AF258465 AF263523 DQ059644 DQ059645 DQ059646 NM_001177431 AB590809 NM_001177428 NM_001177433 NM_147204 AB032427	-30498	-	AY372530 AY372531 CU679533 AK313457 AF209704 TSC_hg19_v1_chr12_-_110318304 AY372532 BC009932 NM_016433	35133	-	TSC_hg19_v1_chr12_+_110338090 AK092736 AX747696 NM_001143852 BC004285 AK301262	54957	+	AY007230 NM_032300 BC022838	55226	+	BC117426|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143307|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##BC143315|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AJ296305|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_021625|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AL834192|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB073669|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB100308|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AF258465|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AF263523|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059644|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059645|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##DQ059646|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177431|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177428|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_001177433|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##NM_147204|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AB032427|TRPV4|59341|transient receptor potential cation channel, subfamily V, member 4##AY372530|GLTP|51228|glycolipid transfer protein##AY372531|GLTP|51228|glycolipid transfer protein##AK313457|GLTP|51228|glycolipid transfer protein##AF209704|GLTP|51228|glycolipid transfer protein##AY372532|GLTP|51228|glycolipid transfer protein##BC009932|GLTP|51228|glycolipid transfer protein##NM_016433|GLTP|51228|glycolipid transfer protein##AK092736|TCHP|84260|trichoplein, keratin filament binding##NM_001143852|TCHP|84260|trichoplein, keratin filament binding##BC004285|TCHP|84260|trichoplein, keratin filament binding##AK301262|TCHP|84260|trichoplein, keratin filament binding##AY007230|TCHP|84260|trichoplein, keratin filament binding##NM_032300|TCHP|84260|trichoplein, keratin filament binding##BC022838|TCHP|84260|trichoplein, keratin filament binding	0.0	
chr2	190986814	190986917	reg1026677.p1	4.519	+	AF019627 AB527883 EU446953 BC074757 AK291524 AF104922 NM_005259	-59478	-	BC036376 TSC_hg19_v1_chr2_+_190649225 BC008410 AK295602 AK308311 BC084548 AY540751 AK297440 BC096330 BC096331 BC096332 AK316215 AK304634	-337665	+	TSC_hg19_v1_chr2_-_190649075 AK074756 NM_001128150 NM_016467	-337767	-	NM_001042521	15620	+	NM_001042520	28106	+	NM_001042519 BC005083 NM_032321 AK313395	58775	+	AF019627|MSTN|2660|myostatin##EU446953|MSTN|2660|myostatin##BC074757|MSTN|2660|myostatin##AK291524|MSTN|2660|myostatin##AF104922|MSTN|2660|myostatin##NM_005259|MSTN|2660|myostatin##BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_001042521|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042519|C2orf88|84281|chromosome 2 open reading frame 88##BC005083|C2orf88|84281|chromosome 2 open reading frame 88##NM_032321|C2orf88|84281|chromosome 2 open reading frame 88##AK313395|C2orf88|84281|chromosome 2 open reading frame 88	0.517256	CTCF.p2:23:0.517
chr7	26237785	26237950	reg1023959.p1	4.519	+	TSC_hg19_v1_chr7_-_26232151 BX538099	-5716	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	-45934	+	AB040290 AF330057 AF440392 NM_022150	-969787	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	2474	-	TSC_hg19_v1_chr7_-_26240364 AK129839 AK289429	2497	-	TSC_hg19_v1_chr7_-_26240367 BX537494 NM_002137 NM_031243	2525	-	BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##AK129839|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##AK289429|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BX537494|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##NM_002137|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##NM_031243|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.831262	CTCF.p2:4:0.831
chrX	51202143	51202291	reg1028550.p1	4.519	+	TSC_hg19_v1_chrX_+_51075673 AK291952 BC050700 BC049383	-126514	+	AF469196 NM_153183	-127135	+	BC117264 BC117266 NM_005448 BC069155 HQ258214	-548459	+	AB528198 AM392606 AK001490 TSC_hg19_v1_chrX_-_51239368	37115	-	BC009942 TSC_hg19_v1_chrX_-_51239444 NM_018159	37225	-	TSC_hg19_v1_chrX_+_51486493 NM_018094 AK225671 BC036077 AK298868 AK023155 AK001303	284294	+	AK291952|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC050700|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC049383|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##AF469196|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##NM_153183|NUDT10|170685|nudix (nucleoside diphosphate linked moiety X)-type motif 10##BC117264|BMP15|9210|bone morphogenetic protein 15##BC117266|BMP15|9210|bone morphogenetic protein 15##NM_005448|BMP15|9210|bone morphogenetic protein 15##BC069155|BMP15|9210|bone morphogenetic protein 15##HQ258214|BMP15|9210|bone morphogenetic protein 15##AM392606|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##AK001490|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##BC009942|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018159|NUDT11|55190|nudix (nucleoside diphosphate linked moiety X)-type motif 11##NM_018094|GSPT2|23708|G1 to S phase transition 2##BC036077|GSPT2|23708|G1 to S phase transition 2##AK298868|GSPT2|23708|G1 to S phase transition 2##AK023155|GSPT2|23708|G1 to S phase transition 2##AK001303|GSPT2|23708|G1 to S phase transition 2	0.897079	CTCF.p2:-67:0.897
chr11	120530167	120530347	reg1016831.p1	4.518	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-147792	+	BC063117 NM_001198665 NM_015313	-322640	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	-323153	+	AB384776 NM_014619 S67803	770	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	364553	+	NM_005422	443117	+	AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha	0.0	
chr16	89665944	89666075	reg1029200.p1	4.518	+	TSC_hg19_v1_chr16_+_89642221 AJ133798 NM_014427 NM_153636 BC064577 BC035334 CU690070 AB463543	-23802	+	TSC_hg19_v1_chr16_+_89627089 BC093063 AK026501 AK093246 AK130964 AK290893 AK294655 AK308545 BC066320 D28432 X64707 AK025405 AK127579 AK130963 AK297198 BC007345 BC004954 BC006179 BC063378 BC007805 BC013078 BC014167 BC027463 BC010994 BC000851 BC020804 NM_033251 BC007563	-38902	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	-38944	+	NM_001128141	13706	+	AK309577 TSC_hg19_v1_chr16_+_89680058	13999	+	J05257 NM_004413	20990	+	AJ133798|CPNE7|27132|copine VII##NM_014427|CPNE7|27132|copine VII##NM_153636|CPNE7|27132|copine VII##BC064577|CPNE7|27132|copine VII##BC035334|CPNE7|27132|copine VII##BC093063|RPL13|6137|ribosomal protein L13##AK026501|RPL13|6137|ribosomal protein L13##AK130964|RPL13|6137|ribosomal protein L13##AK290893|RPL13|6137|ribosomal protein L13##AK294655|RPL13|6137|ribosomal protein L13##AK308545|RPL13|6137|ribosomal protein L13##BC066320|RPL13|6137|ribosomal protein L13##D28432|RPL13|6137|ribosomal protein L13##X64707|RPL13|6137|ribosomal protein L13##AK025405|RPL13|6137|ribosomal protein L13##AK127579|RPL13|6137|ribosomal protein L13##AK130963|RPL13|6137|ribosomal protein L13##AK297198|RPL13|6137|ribosomal protein L13##BC007345|RPL13|6137|ribosomal protein L13##BC004954|RPL13|6137|ribosomal protein L13##BC006179|RPL13|6137|ribosomal protein L13##BC063378|RPL13|6137|ribosomal protein L13##BC007805|RPL13|6137|ribosomal protein L13##BC013078|RPL13|6137|ribosomal protein L13##BC014167|RPL13|6137|ribosomal protein L13##BC027463|RPL13|6137|ribosomal protein L13##BC010994|RPL13|6137|ribosomal protein L13##BC000851|RPL13|6137|ribosomal protein L13##BC020804|RPL13|6137|ribosomal protein L13##NM_033251|RPL13|6137|ribosomal protein L13##BC007563|RPL13|6137|ribosomal protein L13##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13##NM_001128141|DPEP1|1800|dipeptidase 1 (renal)##AK309577|DPEP1|1800|dipeptidase 1 (renal)##J05257|DPEP1|1800|dipeptidase 1 (renal)##NM_004413|DPEP1|1800|dipeptidase 1 (renal)	0.067275	
chr18	46476198	46476275	reg1023183.p2	4.518	+	AK301535 NM_001190822	-534	-	AK131394 NM_001190823	-7089	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-410463	+	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	531	-	AF010193 NM_001190821 NM_005904	844	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	510815	-	AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin	0.0	
chr22	36627097	36627252	reg1032521.p2	4.518	+	AK290466 BC006276 AK313637 AK311506 AY014914 AY014915 NM_030643 NM_145660	-26356	-	AY014906 AY014907 NM_145641 NM_145642	-64950	-	BC042918 BC038352 AK025349 AF070675 BC070144 AF305227 BC050596 AY014902 AY014903 AY014904 AY014905 NM_145640	-70296	-	AF305429 TSC_hg19_v1_chr22_-_36635617 BC004395 AF305225 AK303978 AB208990 AK056938	8417	-	TSC_hg19_v1_chr22_-_36635666 AF324223 NM_030882	8503	-	AF324224 NM_145637	8825	-	AK290466|APOL4|80832|apolipoprotein L, 4##BC006276|APOL4|80832|apolipoprotein L, 4##AK313637|APOL4|80832|apolipoprotein L, 4##AK311506|APOL4|80832|apolipoprotein L, 4##AY014914|APOL4|80832|apolipoprotein L, 4##AY014915|APOL4|80832|apolipoprotein L, 4##NM_030643|APOL4|80832|apolipoprotein L, 4##NM_145660|APOL4|80832|apolipoprotein L, 4##AY014906|APOL3|80833|apolipoprotein L, 3##AY014907|APOL3|80833|apolipoprotein L, 3##NM_145641|APOL3|80833|apolipoprotein L, 3##NM_145642|APOL3|80833|apolipoprotein L, 3##BC042918|APOL3|80833|apolipoprotein L, 3##BC038352|APOL3|80833|apolipoprotein L, 3##AK025349|APOL3|80833|apolipoprotein L, 3##AF070675|APOL3|80833|apolipoprotein L, 3##AF305227|APOL3|80833|apolipoprotein L, 3##BC050596|APOL3|80833|apolipoprotein L, 3##AY014902|APOL3|80833|apolipoprotein L, 3##AY014903|APOL3|80833|apolipoprotein L, 3##AY014904|APOL3|80833|apolipoprotein L, 3##AY014905|APOL3|80833|apolipoprotein L, 3##NM_145640|APOL3|80833|apolipoprotein L, 3##AF305429|APOL2|23780|apolipoprotein L, 2##BC004395|APOL2|23780|apolipoprotein L, 2##AF305225|APOL2|23780|apolipoprotein L, 2##AK303978|APOL2|23780|apolipoprotein L, 2##AB208990|APOL2|23780|apolipoprotein L, 2##AK056938|APOL2|23780|apolipoprotein L, 2##AF324223|APOL2|23780|apolipoprotein L, 2##NM_030882|APOL2|23780|apolipoprotein L, 2##AF324224|APOL2|23780|apolipoprotein L, 2##NM_145637|APOL2|23780|apolipoprotein L, 2	1.594252	CTCF.p2:-20:0.999	CTCF.p2:106:0.595
chr22	37558947	37559127	reg1029501.p3	4.518	+	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	-13085	-	CR456446 TSC_hg19_v1_chr22_-_37505748	-53359	-	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	-59462	-	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	25254	-	BC042068 NM_001051 AK291165	49346	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	81184	-	BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##CR456446|TMPRSS6|164656|transmembrane protease, serine 6##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)	0.0	
chr4	99861108	99861214	reg1028693.p2	4.518	+	NM_001130679 NM_001968 BC035166	-9375	-	M15353 TSC_hg19_v1_chr4_-_99850288	-10870	-	AK300982 NM_001130678 AB528981 DQ890728 DQ893903 TSC_hg19_v1_chr4_-_99850278 BC012611 BC107715 AK295083	-10901	-	NM_015143 TSC_hg19_v1_chr4_+_99916843	55654	+	TSC_hg19_v1_chr4_+_99916871 AK304239	55698	+	TSC_hg19_v1_chr4_+_99916874 D42084 AB385277	55727	+	NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E##NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E##BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E##M15353|EIF4E|1977|eukaryotic translation initiation factor 4E##AK300982|EIF4E|1977|eukaryotic translation initiation factor 4E##NM_001130678|EIF4E|1977|eukaryotic translation initiation factor 4E##DQ890728|EIF4E|1977|eukaryotic translation initiation factor 4E##DQ893903|EIF4E|1977|eukaryotic translation initiation factor 4E##BC012611|EIF4E|1977|eukaryotic translation initiation factor 4E##BC107715|EIF4E|1977|eukaryotic translation initiation factor 4E##NM_015143|METAP1|23173|methionyl aminopeptidase 1##AK304239|METAP1|23173|methionyl aminopeptidase 1##D42084|METAP1|23173|methionyl aminopeptidase 1	0.158715	
chr7	148823416	148823595	reg1030887.p1	4.518	+	TSC_hg19_v1_chr7_+_148823499 AY049743 NM_020781	-3	+	TSC_hg19_v1_chr7_-_148823395 NM_001001661	-92	-	TSC_hg19_v1_chr7_-_148823339 AK125575 BC125189 AK056498 AY621067	-168	-	TSC_hg19_v1_chr7_+_148844532 AK026380 NM_170686 BC043295 AK290499	21024	+	TSC_hg19_v1_chr7_+_148844772 AY049744 AB527270 CU692152	21254	+	D30612 TSC_hg19_v1_chr7_+_148892683 NM_003575 AK299280 BC073805 AK316282 AB587508 BC055287 BC041704	69184	+	AY049743|ZNF398|57541|zinc finger protein 398##NM_020781|ZNF398|57541|zinc finger protein 398##NM_001001661|ZNF425|155054|zinc finger protein 425##BC125189|ZNF425|155054|zinc finger protein 425##AK056498|ZNF425|155054|zinc finger protein 425##AY621067|ZNF425|155054|zinc finger protein 425##AK026380|ZNF398|57541|zinc finger protein 398##NM_170686|ZNF398|57541|zinc finger protein 398##BC043295|ZNF398|57541|zinc finger protein 398##AK290499|ZNF398|57541|zinc finger protein 398##AY049744|ZNF398|57541|zinc finger protein 398##D30612|ZNF282|8427|zinc finger protein 282##NM_003575|ZNF282|8427|zinc finger protein 282##AK299280|ZNF282|8427|zinc finger protein 282##BC073805|ZNF282|8427|zinc finger protein 282##AK316282|ZNF282|8427|zinc finger protein 282##BC055287|ZNF282|8427|zinc finger protein 282##BC041704|ZNF282|8427|zinc finger protein 282	1.127585	CTCF.p2:-4:0.203	CTCF.p2:-30:0.925
chr8	26486309	26486417	reg1023663.p2	4.518	+	NM_001244604 TSC_hg19_v1_chr8_+_26435921 AK299077	-50436	+	TSC_hg19_v1_chr8_+_26435604 U17279 AB370194 AB590733 BT006944 CU691152	-50683	+	TSC_hg19_v1_chr8_+_26435468 AK223557 BC056408 D78013 BC010880 AK291287	-50836	+	U02569 AY491775 AY491776 AY491777 AY491778 AY491779 AY491780 AY491781 D25235 D32201 D32202 NM_000680 NM_033302 NM_033303 NM_033304	236555	-	AK311558 TSC_hg19_v1_chr8_-_26724735	238371	-	TSC_hg19_v1_chr8_-_26724764 AK289548	238395	-	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2##AK299077|DPYSL2|1808|dihydropyrimidinase-like 2##U17279|DPYSL2|1808|dihydropyrimidinase-like 2##AB370194|DPYSL2|1808|dihydropyrimidinase-like 2##AK223557|DPYSL2|1808|dihydropyrimidinase-like 2##BC056408|DPYSL2|1808|dihydropyrimidinase-like 2##D78013|DPYSL2|1808|dihydropyrimidinase-like 2##AK291287|DPYSL2|1808|dihydropyrimidinase-like 2##U02569|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491775|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491776|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491777|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491778|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491780|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491781|ADRA1A|148|adrenergic, alpha-1A-, receptor##D25235|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32201|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32202|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_000680|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033302|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033303|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033304|ADRA1A|148|adrenergic, alpha-1A-, receptor##AK289548|ADRA1A|148|adrenergic, alpha-1A-, receptor	0.0	
chr14	105532852	105532981	reg1030677.p2	4.517	+	TSC_hg19_v1_chr14_-_105531768 AB465599 AB465600 AK292142 AK303654 AX775935 AX775841	-1143	-	TSC_hg19_v1_chr14_-_105531756 AF083955 AX775937 NM_013345 EU543705	-1168	-	TSC_hg19_v1_chr14_-_105487428 NM_017955 NM_145701	-45492	-	Y14330 AF003521 AF020201 TSC_hg19_v1_chr14_-_105634835 BC032053	101875	-	TSC_hg19_v1_chr14_-_105635114 AF029778 AF029779 NM_002226 NM_145159	102221	-	TSC_hg19_v1_chr14_-_105647650 AB087802 HQ257983 BC041584 AK128196 AK310449 NM_177533	114678	-	AB465599|GPR132|29933|G protein-coupled receptor 132##AB465600|GPR132|29933|G protein-coupled receptor 132##AK292142|GPR132|29933|G protein-coupled receptor 132##AK303654|GPR132|29933|G protein-coupled receptor 132##AX775935|GPR132|29933|G protein-coupled receptor 132##AX775841|GPR132|29933|G protein-coupled receptor 132##AF083955|GPR132|29933|G protein-coupled receptor 132##NM_013345|GPR132|29933|G protein-coupled receptor 132##EU543705|GPR132|29933|G protein-coupled receptor 132##NM_017955|CDCA4|55038|cell division cycle associated 4##NM_145701|CDCA4|55038|cell division cycle associated 4##Y14330|JAG2|3714|jagged 2##AF003521|JAG2|3714|jagged 2##AF020201|JAG2|3714|jagged 2##BC032053|JAG2|3714|jagged 2##AF029778|JAG2|3714|jagged 2##AF029779|JAG2|3714|jagged 2##NM_002226|JAG2|3714|jagged 2##NM_145159|JAG2|3714|jagged 2##AB087802|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##HQ257983|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##BC041584|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AK128196|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##NM_177533|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14	0.687455	CTCF.p2:-75:0.516
chr15	38856985	38857082	reg1004322.p2	4.517	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-102	-	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-110688	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	-312011	+	AK093014 AX747856 BC119016 BC119810 NM_207444	131765	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	685892	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	1016296	+	EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1	0.0	
chr16	8729345	8729460	reg1026520.p1	4.517	+	TSC_hg19_v1_chr16_+_8715563 NM_024109 AK315383 BC001908 AK022495	-13862	+	AF094849 AF109106 AF229057 NM_145891 NM_145892 NM_145893	-1346652	+	AK001027 NM_001142334	-1905593	+	TSC_hg19_v1_chr16_+_8768473 NM_020686 BX537362 AK096146 BC031413 BC015628	39060	+	NM_000663 TSC_hg19_v1_chr16_+_8806841 BC013965	77433	+	TSC_hg19_v1_chr16_+_8807190 AK054834	77800	+	NM_024109|METTL22|79091|methyltransferase like 22##AK315383|METTL22|79091|methyltransferase like 22##BC001908|METTL22|79091|methyltransferase like 22##AK022495|METTL22|79091|methyltransferase like 22##AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_020686|ABAT|18|4-aminobutyrate aminotransferase##BX537362|ABAT|18|4-aminobutyrate aminotransferase##AK096146|ABAT|18|4-aminobutyrate aminotransferase##BC031413|ABAT|18|4-aminobutyrate aminotransferase##BC015628|ABAT|18|4-aminobutyrate aminotransferase##NM_000663|ABAT|18|4-aminobutyrate aminotransferase##BC013965|ABAT|18|4-aminobutyrate aminotransferase##AK054834|ABAT|18|4-aminobutyrate aminotransferase	0.08504	
chr17	38754919	38755057	reg1016597.p1	4.517	+	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	-33270	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	-97142	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-155169	+	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	49082	-	BC069196 TSC_hg19_v1_chr17_-_38804818	49808	-	BX538083 EU832123 EU832217 BC032815 AK092967 AK308598 NM_152349	66362	-	BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC069196|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BX538083|KRT222|125113|keratin 222##EU832123|KRT222|125113|keratin 222##EU832217|KRT222|125113|keratin 222##BC032815|KRT222|125113|keratin 222##AK308598|KRT222|125113|keratin 222##NM_152349|KRT222|125113|keratin 222	0.0	
chr19	47852318	47852476	reg1029978.p1	4.517	+	AB038237 NM_018485	-12027	+	BC008982 NM_001736 TSC_hg19_v1_chr19_+_47813117 M62505	-39295	+	TSC_hg19_v1_chr19_+_47778141 BC022076 BC045749 NM_178511 BC064510	-74261	+	NM_014681 TSC_hg19_v1_chr19_+_47852571 AK304710	172	+	AB463870 AK289950 TSC_hg19_v1_chr19_-_47922380	69963	-	TSC_hg19_v1_chr19_-_47922396 BC069251	70001	-	AB038237|GPR77|27202|G protein-coupled receptor 77##NM_018485|GPR77|27202|G protein-coupled receptor 77##BC008982|C5AR1|728|complement component 5a receptor 1##NM_001736|C5AR1|728|complement component 5a receptor 1##M62505|C5AR1|728|complement component 5a receptor 1##BC022076|PRR24|255783|proline rich 24##BC045749|PRR24|255783|proline rich 24##NM_178511|PRR24|255783|proline rich 24##BC064510|PRR24|255783|proline rich 24##NM_014681|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34##AK304710|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34##AK289950|MEIS3|56917|Meis homeobox 3##BC069251|MEIS3|56917|Meis homeobox 3	0.992624	CTCF.p2:9:0.993
chr2	222435337	222435466	reg1027615.p1	4.517	+	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-1943047	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-1972812	+	M13981 NM_002191 BC039076 BC006391 TSC_hg19_v1_chr2_+_220437031 BT006954 CU675381 DQ890602 DQ893773 M13144	-1998355	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	1609	-	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	723619	-	AK057009 NM_153038 BC109388	727511	+	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##M13981|INHA|3623|inhibin, alpha##NM_002191|INHA|3623|inhibin, alpha##BC039076|INHA|3623|inhibin, alpha##BC006391|INHA|3623|inhibin, alpha##BT006954|INHA|3623|inhibin, alpha##DQ890602|INHA|3623|inhibin, alpha##DQ893773|INHA|3623|inhibin, alpha##M13144|INHA|3623|inhibin, alpha##BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140	0.0	
chr5	116032166	116032347	reg1032067.p2	4.517	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-121742	-	TSC_hg19_v1_chr5_+_115898220 D28352	-134032	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-611535	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2291982	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2374555	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2374909	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr6	16591945	16592112	reg1024689.p1	4.517	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-353177	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-448718	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-462591	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	169669	-	NM_001190766	510460	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	689826	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.0	
chr9	78203855	78203983	reg1027534.p1	4.517	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	-500409	+	TSC_hg19_v1_chr9_+_77703406 NM_012383	-500519	+	BC001366 TSC_hg19_v1_chr9_-_77703070 AK000566 AK097144 AK023413 BC036804 NM_001127603 NM_017881 BC026243	-500831	-	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	301716	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	805472	-	AY196293 NM_001097634	852662	+	AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1##NM_012383|OSTF1|26578|osteoclast stimulating factor 1##BC001366|C9orf95|54981|chromosome 9 open reading frame 95##AK000566|C9orf95|54981|chromosome 9 open reading frame 95##AK097144|C9orf95|54981|chromosome 9 open reading frame 95##AK023413|C9orf95|54981|chromosome 9 open reading frame 95##BC036804|C9orf95|54981|chromosome 9 open reading frame 95##NM_001127603|C9orf95|54981|chromosome 9 open reading frame 95##NM_017881|C9orf95|54981|chromosome 9 open reading frame 95##BC026243|C9orf95|54981|chromosome 9 open reading frame 95##NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.0	
chr10	130328732	130328827	reg1032594.p1	4.516	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-404251	-	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	-482925	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-623324	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	936692	+	TSC_hg19_v1_chr10_+_131265507 BC000824	936735	+	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	1433274	-	NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3	0.697234	CTCF.p2:0:0.697
chr16	10063534	10063694	reg1031129.p2	4.516	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-878011	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-878074	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-1006319	-	BC143273 U09002 NM_001134408	212219	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	212574	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	213063	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.038424	
chr21	34641523	34641703	reg1026610.p2	4.516	+	TSC_hg19_v1_chr21_+_34638753 AK299961 AB590138 DQ892552 DQ895763 BT009777	-2859	+	TSC_hg19_v1_chr21_+_34638697 AK313348 NM_000628 BC001903 Z17227	-2912	+	TSC_hg19_v1_chr21_+_34602305 BC013156 X77722 X89814 U29584	-39211	+	TSC_hg19_v1_chr21_+_34697236 NM_000629	55605	+	AK222770 AK222812 AK312631 TSC_hg19_v1_chr21_+_34697277 BC021825 J03171 BC002590 AB528746 CU692410 DQ891323 DQ894507	55705	+	TSC_hg19_v1_chr21_+_34775192 NM_005534 U05875	133583	+	AK299961|IL10RB|3588|interleukin 10 receptor, beta##DQ892552|IL10RB|3588|interleukin 10 receptor, beta##DQ895763|IL10RB|3588|interleukin 10 receptor, beta##BT009777|IL10RB|3588|interleukin 10 receptor, beta##AK313348|IL10RB|3588|interleukin 10 receptor, beta##NM_000628|IL10RB|3588|interleukin 10 receptor, beta##BC001903|IL10RB|3588|interleukin 10 receptor, beta##Z17227|IL10RB|3588|interleukin 10 receptor, beta##BC013156|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X77722|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X89814|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##U29584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_000629|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK222770|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK222812|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK312631|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC021825|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##J03171|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC002590|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ891323|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ894507|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##NM_005534|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05875|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)	0.0168	
chr5	166476177	166476286	reg1026547.p1	4.516	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-3543588	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-3545943	+	NM_001142556 NM_001142557 NM_012484 NM_012485 BC057235 AK313603 BC030505 TSC_hg19_v1_chr5_+_162887665 AK302975 BC006984 AK303616 BC070281 BC017793 U29343 AF032862 BC108904 BC108905 BC107869 AK290577	-3588636	+	HE578282 HE578283 NM_001122679	235611	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	1242590	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	1437243	+	AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001142556|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001142557|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012484|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_012485|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC057235|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK313603|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC030505|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK302975|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK303616|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC070281|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC017793|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##U29343|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AF032862|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108904|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC108905|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##BC107869|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##AK290577|HMMR|3161|hyaluronan-mediated motility receptor (RHAMM)##NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.0	
chr7	28855576	28855720	reg1029601.p1	4.516	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	-129965	+	AK292916 TSC_hg19_v1_chr7_+_28530784	-324883	+	L05911 NM_004904	-380415	+	CU690330 TSC_hg19_v1_chr7_-_28997732	142049	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	142281	-	AK293803 NM_014817 TSC_hg19_v1_chr7_-_28998036	142384	-	L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5##AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats##NM_014817|TRIL|9865|TLR4 interactor with leucine-rich repeats	0.0	
chr7	67642136	67642241	reg1028519.p1	4.516	+	TSC_hg19_v1_chr7_+_66767656 BC026058	-874531	+	TSC_hg19_v1_chr7_+_66767642 AK307290	-874540	+	TSC_hg19_v1_chr7_+_66767639 AK023257 AK308931	-874580	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	1421648	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	1422141	+	TSC_hg19_v1_chr7_+_69064580 BC011643	1422400	+	BC026058|STAG3L4|64940|stromal antigen 3-like 4##AK307290|STAG3L4|64940|stromal antigen 3-like 4##AK023257|STAG3L4|64940|stromal antigen 3-like 4##AK308931|STAG3L4|64940|stromal antigen 3-like 4##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2	1.012569	CTCF.p2:-4:0.976
chr8	142099670	142099814	reg1031171.p1	4.516	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-88486	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-454118	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-578179	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	38995	+	AK128212 NM_001080431	138930	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	164448	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.0	
chrX	68838782	68838877	reg1025707.p1	4.516	+	AF040628 AF060999 AF061189 AF061190 AF061191 AF061192 AF061193 AF061194 NM_001005609 NM_001005610 NM_001005612 NM_001005613 NM_001399 U59228 BC126143 BC144049 BC144051	-2894	+	AF087142 NM_015686 BC136518 BC136519	-113746	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	-453523	-	AB528121 AY605053 NM_001002254	430955	-	AK098697 NM_207320 BC137355 BC137356	443513	+	AK054596 BC004137 NM_001551 AK315660	514510	+	AF040628|EDA|1896|ectodysplasin A##AF060999|EDA|1896|ectodysplasin A##AF061189|EDA|1896|ectodysplasin A##AF061190|EDA|1896|ectodysplasin A##AF061191|EDA|1896|ectodysplasin A##AF061192|EDA|1896|ectodysplasin A##AF061193|EDA|1896|ectodysplasin A##AF061194|EDA|1896|ectodysplasin A##NM_001005609|EDA|1896|ectodysplasin A##NM_001005610|EDA|1896|ectodysplasin A##NM_001005612|EDA|1896|ectodysplasin A##NM_001005613|EDA|1896|ectodysplasin A##NM_001399|EDA|1896|ectodysplasin A##U59228|EDA|1896|ectodysplasin A##BC126143|EDA|1896|ectodysplasin A##BC144049|EDA|1896|ectodysplasin A##BC144051|EDA|1896|ectodysplasin A##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AY605053|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##NM_001002254|AWAT2|158835|acyl-CoA wax alcohol acyltransferase 2##AK098697|OTUD6A|139562|OTU domain containing 6A##NM_207320|OTUD6A|139562|OTU domain containing 6A##BC137355|OTUD6A|139562|OTU domain containing 6A##BC137356|OTUD6A|139562|OTU domain containing 6A##AK054596|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##BC004137|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##NM_001551|IGBP1|3476|immunoglobulin (CD79A) binding protein 1##AK315660|IGBP1|3476|immunoglobulin (CD79A) binding protein 1	0.902173	CTCF.p2:15:0.902
chr1	100600584	100600680	reg1028660.p1	4.515	+	NM_019083 AK295828 BC075811 BC057226 AK002081 AK289404 AK001149 AK294738 AK298941 AB527509	-1918	+	BX648406 BC101026 BX641109 AK302513 AY359522 BC054889 NM_194292 AK307824	-2171	-	TSC_hg19_v1_chr1_+_100503661 AF427492 NM_033055	-96911	+	BC009613 NM_144620 AK096892 AL833417 BC022420 AY358131	43153	-	J03208 M19301 M27093 BC016675 BC030002 BT007372 TSC_hg19_v1_chr1_-_100715382	114747	-	AK303941 AK313191 TSC_hg19_v1_chr1_-_100715394 X66785 NM_001918	114767	-	NM_019083|CCDC76|54482|coiled-coil domain containing 76##AK295828|CCDC76|54482|coiled-coil domain containing 76##BC075811|CCDC76|54482|coiled-coil domain containing 76##BC057226|CCDC76|54482|coiled-coil domain containing 76##AK002081|CCDC76|54482|coiled-coil domain containing 76##AK289404|CCDC76|54482|coiled-coil domain containing 76##AK001149|CCDC76|54482|coiled-coil domain containing 76##AK294738|CCDC76|54482|coiled-coil domain containing 76##AK298941|CCDC76|54482|coiled-coil domain containing 76##BX648406|SASS6|163786|spindle assembly 6 homolog (C. elegans)##BC101026|SASS6|163786|spindle assembly 6 homolog (C. elegans)##BX641109|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AK302513|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AY359522|SASS6|163786|spindle assembly 6 homolog (C. elegans)##BC054889|SASS6|163786|spindle assembly 6 homolog (C. elegans)##NM_194292|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AK307824|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AF427492|HIAT1|64645|hippocampus abundant transcript 1##NM_033055|HIAT1|64645|hippocampus abundant transcript 1##BC009613|LRRC39|127495|leucine rich repeat containing 39##NM_144620|LRRC39|127495|leucine rich repeat containing 39##AK096892|LRRC39|127495|leucine rich repeat containing 39##AL833417|LRRC39|127495|leucine rich repeat containing 39##BC022420|LRRC39|127495|leucine rich repeat containing 39##AY358131|LRRC39|127495|leucine rich repeat containing 39##J03208|DBT|1629|dihydrolipoamide branched chain transacylase E2##M19301|DBT|1629|dihydrolipoamide branched chain transacylase E2##M27093|DBT|1629|dihydrolipoamide branched chain transacylase E2##BC016675|DBT|1629|dihydrolipoamide branched chain transacylase E2##BC030002|DBT|1629|dihydrolipoamide branched chain transacylase E2##BT007372|DBT|1629|dihydrolipoamide branched chain transacylase E2##AK303941|DBT|1629|dihydrolipoamide branched chain transacylase E2##AK313191|DBT|1629|dihydrolipoamide branched chain transacylase E2##X66785|DBT|1629|dihydrolipoamide branched chain transacylase E2##NM_001918|DBT|1629|dihydrolipoamide branched chain transacylase E2	0.048555	
chr16	18957609	18957722	reg1021778.p2	4.515	+	TSC_hg19_v1_chr16_-_18937724 NM_015092 AB061371	-19934	-	AK301636 CU679669 TSC_hg19_v1_chr16_-_18812870 BC010281 D31885 NM_015161 AK291137 AK308092 BX648446 AK300825 AK300869 AK307315	-144883	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	-156010	-	AK094664 NM_024847 TSC_hg19_v1_chr16_+_18995296 AY236498 BC047719 AY263165 BC036205 AK293874 CU690480	37654	+	TSC_hg19_v1_chr16_+_18995511 CR933669 NM_001160364	37893	+	AK315470 NM_016138 TSC_hg19_v1_chr16_+_19078935 BC003185 AK024291	121265	+	NM_015092|SMG1|23049|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)##AB061371|SMG1|23049|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans)##AK301636|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BC010281|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##D31885|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##NM_015161|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK291137|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK308092|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BX648446|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK300825|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK300869|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##AK307315|ARL6IP1|23204|ADP-ribosylation factor-like 6 interacting protein 1##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a##AK094664|TMC7|79905|transmembrane channel-like 7##NM_024847|TMC7|79905|transmembrane channel-like 7##AY236498|TMC7|79905|transmembrane channel-like 7##BC047719|TMC7|79905|transmembrane channel-like 7##AY263165|TMC7|79905|transmembrane channel-like 7##BC036205|TMC7|79905|transmembrane channel-like 7##AK293874|TMC7|79905|transmembrane channel-like 7##CR933669|TMC7|79905|transmembrane channel-like 7##NM_001160364|TMC7|79905|transmembrane channel-like 7##AK315470|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_016138|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC003185|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##AK024291|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)	0.461956	CTCF.p2:11:0.462
chr3	158981681	158981805	reg1027410.p1	4.515	+	TSC_hg19_v1_chr3_+_158787146 BC137464 BC137469 BC144658	-194592	+	NM_001042705 NM_001042706 NM_001197100 NM_001197113 NM_001197114 AK309049 DQ309553 DQ309554 TSC_hg19_v1_chr3_+_158787130 AK096479	-194656	+	TSC_hg19_v1_chr3_+_158519925 AK301680	-461809	+	BC036535 NM_001197107 NM_001197108 NM_014575 TSC_hg19_v1_chr3_+_158991047	9299	+	TSC_hg19_v1_chr3_+_158991090 AK314662	9348	+	TSC_hg19_v1_chr3_+_159481881 AK309223	500219	+	BC137464|IQCJ|654502|IQ motif containing J##BC137469|IQCJ|654502|IQ motif containing J##BC144658|IQCJ|654502|IQ motif containing J##NM_001042705|IQCJ|654502|IQ motif containing J##NM_001042706|IQCJ|654502|IQ motif containing J##NM_001197100|IQCJ|654502|IQ motif containing J##NM_001197113|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##NM_001197114|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##AK309049|IQCJ|654502|IQ motif containing J##DQ309553|IQCJ|654502|IQ motif containing J##DQ309554|IQCJ|654502|IQ motif containing J##AK096479|IQCJ-SCHIP1|100505385|IQCJ-SCHIP1 readthrough##AK301680|MFSD1|64747|major facilitator superfamily domain containing 1##BC036535|SCHIP1|29970|schwannomin interacting protein 1##NM_001197107|SCHIP1|29970|schwannomin interacting protein 1##NM_001197108|SCHIP1|29970|schwannomin interacting protein 1##NM_014575|SCHIP1|29970|schwannomin interacting protein 1##AK314662|SCHIP1|29970|schwannomin interacting protein 1##AK309223|SCHIP1|29970|schwannomin interacting protein 1	0.980621	CTCF.p2:-27:0.981
chr5	126366483	126366660	reg1030184.p2	4.515	+	NM_178450	-132	-	BC146948 BC146964 AF055007 TSC_hg19_v1_chr5_-_126366251 BC047569 AK290129	-396	-	TSC_hg19_v1_chr5_+_126113050 AB527547 DQ891592 EU176582 CU680274	-253447	+	AK126569 NM_001164478 NM_001164479	42606	-	NM_032446 CR749437 AK307919 BC020198 AB058676 BC152478	259963	+	NM_130809 TSC_hg19_v1_chr5_+_126853331 AL831963 AL832056 AL832600 AJ427339 AJ441110 AJ496322 AJ515158 AJ515428 AJ515429 AK057437 BC017066	486780	+	NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146948|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146964|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AF055007|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC047569|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK290129|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##DQ891592|LMNB1|4001|lamin B1##EU176582|LMNB1|4001|lamin B1##AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63##NM_032446|MEGF10|84466|multiple EGF-like-domains 10##CR749437|MEGF10|84466|multiple EGF-like-domains 10##AK307919|MEGF10|84466|multiple EGF-like-domains 10##BC020198|MEGF10|84466|multiple EGF-like-domains 10##AB058676|MEGF10|84466|multiple EGF-like-domains 10##BC152478|MEGF10|84466|multiple EGF-like-domains 10##NM_130809|PRRC1|133619|proline-rich coiled-coil 1##AL831963|PRRC1|133619|proline-rich coiled-coil 1##AL832056|PRRC1|133619|proline-rich coiled-coil 1##AL832600|PRRC1|133619|proline-rich coiled-coil 1##AJ427339|PRRC1|133619|proline-rich coiled-coil 1##AJ441110|PRRC1|133619|proline-rich coiled-coil 1##AJ496322|PRRC1|133619|proline-rich coiled-coil 1##AJ515158|PRRC1|133619|proline-rich coiled-coil 1##AJ515428|PRRC1|133619|proline-rich coiled-coil 1##AJ515429|PRRC1|133619|proline-rich coiled-coil 1##AK057437|PRRC1|133619|proline-rich coiled-coil 1##BC017066|PRRC1|133619|proline-rich coiled-coil 1	0.057742	
chr6	143014280	143014460	reg1003512.p2	4.515	+	TSC_hg19_v1_chr6_+_142623443 BX640873	-390964	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-391301	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-503741	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	251958	-	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	367625	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	367666	+	BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1	0.0	
chr7	72715238	72715340	reg1032354.p1	4.515	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	-146258	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-290047	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-318415	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	7535	-	AK057366 AY081948 AY081949 NM_178125	26795	-	NM_001135211 AK302121 NM_003602 AK310255 BC036817 AF038847 CU691432 EU176233 EU176537 GQ129339 GQ129340	27003	+	BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50##NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa##AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa##NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa##AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa##BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa##AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa	0.997129	CTCF.p2:1:0.997
chrX	148824070	148824213	reg1035400.p1	4.515	+	NM_005366 AY747607 BC004479	-30372	+	AK127849 NM_001011544	-54239	+	AK097391 AK096308 AK297335 TSC_hg19_v1_chrX_-_148713449 NM_001174092 NM_032508 AF530473	-110658	-	NM_001164415 NM_016153	31584	+	AK292272 AK313321 NM_001080790 BC002351 NM_005365	39454	+	AK313943 NM_001166400 NM_001166401 NM_005364 BC002455 BC012744	185829	+	NM_005366|MAGEA11|4110|melanoma antigen family A, 11##AY747607|MAGEA11|4110|melanoma antigen family A, 11##BC004479|MAGEA11|4110|melanoma antigen family A, 11##AK127849|MAGEA11|4110|melanoma antigen family A, 11##NM_001011544|MAGEA11|4110|melanoma antigen family A, 11##AK097391|TMEM185A|84548|transmembrane protein 185A##AK096308|TMEM185A|84548|transmembrane protein 185A##AK297335|TMEM185A|84548|transmembrane protein 185A##NM_001174092|TMEM185A|84548|transmembrane protein 185A##NM_032508|TMEM185A|84548|transmembrane protein 185A##AF530473|TMEM185A|84548|transmembrane protein 185A##NM_001164415|HSFX2|100130086|heat shock transcription factor family, X linked 2##NM_016153|HSFX1|100506164|heat shock transcription factor family, X linked 1##AK292272|MAGEA9|4108|melanoma antigen family A, 9##AK313321|MAGEA9|4108|melanoma antigen family A, 9##NM_001080790|MAGEA9B|728269|melanoma antigen family A, 9B##BC002351|MAGEA9|4108|melanoma antigen family A, 9##NM_005365|MAGEA9|4108|melanoma antigen family A, 9##AK313943|MAGEA8|4107|melanoma antigen family A, 8##NM_001166400|MAGEA8|4107|melanoma antigen family A, 8##NM_001166401|MAGEA8|4107|melanoma antigen family A, 8##NM_005364|MAGEA8|4107|melanoma antigen family A, 8##BC002455|MAGEA8|4107|melanoma antigen family A, 8##BC012744|MAGEA8|4107|melanoma antigen family A, 8	0.1262	
chr14	50514239	50514355	reg1029788.p1	4.514	+	AK091232 AX746864 NM_001012706	-40060	-	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-153891	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-154464	+	AF390030 NM_001014830	45063	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	68973	-	TSC_hg19_v1_chr14_-_50697940 L13858 HQ258542 AB463275 BC117261 BC143366 BC143367	183686	-	AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D##L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)##HQ258542|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)	0.0	
chr16	11465730	11465834	reg1026761.p2	4.514	+	TSC_hg19_v1_chr16_+_11439315 BC013040	-26464	+	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	-26488	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-90640	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	214405	-	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	215007	-	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	296516	+	BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin	0.067176	
chr17	62982188	62982325	reg1028608.p2	4.514	+	TSC_hg19_v1_chr17_-_62971685 BX537538 AK056627 BC063466 AK311317	-10636	-	TSC_hg19_v1_chr17_-_62915587 AK294371	-66660	-	AB011135 NM_199340	-67354	-	TSC_hg19_v1_chr17_-_63009302 AK026902	27050	-	TSC_hg19_v1_chr17_-_63052724 AB528470 AF493902 CU691408 DQ893572 DQ894448 AK313672	70462	-	TSC_hg19_v1_chr17_-_63052756 L22075 BC036756	70504	-	BX537538|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK056627|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##BC063466|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK311317|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3##NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AF493902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ893572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ894448|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AK313672|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##L22075|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC036756|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	0.0	
chr19	2052459	2052607	reg1027284.p4	4.514	+	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-1300	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-6292	-	TSC_hg19_v1_chr19_-_2042036 AK001730	-10483	-	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	32710	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	43732	-	TSC_hg19_v1_chr19_-_2096297 AL832474	43761	-	BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK001730|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A	0.0	
chr3	79037606	79037735	reg1040406.p1	4.514	+	TSC_hg19_v1_chr3_-_78666943 AK025535	-370685	-	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-1948390	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-3202968	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	30917	-	NM_002941	779388	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	2773027	-	AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK123776|ZNF717|100131827|zinc finger protein 717##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.573302	CTCF.p2:1:0.573
chr5	10607292	10607472	reg1023871.p1	4.514	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-42940	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-165230	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-165379	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	153877	-	TSC_hg19_v1_chr5_-_10761341 BC002726	153960	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	154017	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.0	
chr5	90576357	90576459	reg1032530.p1	4.514	+	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	-721794	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-751042	-	NM_006467 AK295434 U93868	-805706	+	AK091866 TSC_hg19_v1_chr5_-_90610220	33837	-	TSC_hg19_v1_chr5_+_90676181 BC043415	99754	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	102724	-	AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3	0.0	
chr7	33784143	33784323	reg1009758.p2	4.514	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-615152	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-635256	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-681911	-	AK289963 NM_133468 AK096150 BC060868	160909	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	913686	+	DQ287932 NM_015283	1293419	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	0.062266	
chr9	137283839	137283995	reg1027665.p2	4.514	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-65517	+	TSC_hg19_v1_chr9_+_137218317 BC063827 NM_002957	-65602	+	AJ011376 NM_052821 AB464354	-278963	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	249730	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	249893	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	488743	+	BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##BC063827|RXRA|6256|retinoid X receptor, alpha##NM_002957|RXRA|6256|retinoid X receptor, alpha##AJ011376|WDR5|11091|WD repeat domain 5##NM_052821|WDR5|11091|WD repeat domain 5##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##D90279|COL5A1|1289|collagen, type V, alpha 1##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	0.0	
chr10	99446805	99446904	reg1028768.p2	4.513	+	TSC_hg19_v1_chr10_+_99400490 BC003167 DQ893537 DQ893758 BT007330	-46370	+	TSC_hg19_v1_chr10_+_99400444 AJ303098 NM_018425	-46412	+	BC010230 BC040015 AJ431726 NM_001098831	-52973	-	TSC_hg19_v1_chr10_-_99446983 AK223099 AF218019 AK024533 AK222493 AF131791 NM_021732 AF241786 AY505173	175	-	TSC_hg19_v1_chr10_+_99473461 NM_031484	26610	+	BC062544 BC004995 TSC_hg19_v1_chr10_+_99473485 AF325259	26627	+	BC003167|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##DQ893537|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##DQ893758|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##BT007330|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##AJ303098|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##NM_018425|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##BC010230|MORN4|118812|MORN repeat containing 4##BC040015|MORN4|118812|MORN repeat containing 4##AJ431726|MORN4|118812|MORN repeat containing 4##NM_001098831|MORN4|118812|MORN repeat containing 4##AK223099|AVPI1|60370|arginine vasopressin-induced 1##AF218019|AVPI1|60370|arginine vasopressin-induced 1##AK024533|AVPI1|60370|arginine vasopressin-induced 1##AK222493|AVPI1|60370|arginine vasopressin-induced 1##AF131791|AVPI1|60370|arginine vasopressin-induced 1##NM_021732|AVPI1|60370|arginine vasopressin-induced 1##AF241786|AVPI1|60370|arginine vasopressin-induced 1##NM_031484|MARVELD1|83742|MARVEL domain containing 1##BC062544|MARVELD1|83742|MARVEL domain containing 1##BC004995|MARVELD1|83742|MARVEL domain containing 1##AF325259|MARVELD1|83742|MARVEL domain containing 1	0.0	
chr11	43536760	43536859	reg1029535.p2	4.513	+	TSC_hg19_v1_chr11_+_43380492 AK001752 BC017238 BC033000	-156317	+	TSC_hg19_v1_chr11_+_43380403 NM_018259	-156391	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	-203169	+	TSC_hg19_v1_chr11_+_43665785 AK095484	128975	+	NM_016142 TSC_hg19_v1_chr11_+_43702287 AK027882 AK075011 AK292625 AK075216 AK074952 AF078850 BC012043 AK222881 AK301663 BC012536 EU176708	165449	+	TSC_hg19_v1_chr11_+_43902380 NM_139178 AK315266 AB042029 BC067257	365584	+	AK001752|TTC17|55761|tetratricopeptide repeat domain 17##BC017238|TTC17|55761|tetratricopeptide repeat domain 17##BC033000|TTC17|55761|tetratricopeptide repeat domain 17##NM_018259|TTC17|55761|tetratricopeptide repeat domain 17##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5##NM_016142|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK027882|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075011|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK292625|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK075216|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK074952|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AF078850|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012043|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK222881|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##AK301663|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##BC012536|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##EU176708|HSD17B12|51144|hydroxysteroid (17-beta) dehydrogenase 12##NM_139178|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AK315266|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##AB042029|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)##BC067257|ALKBH3|221120|alkB, alkylation repair homolog 3 (E. coli)	0.305162	CTCF.p2:-1:0.305
chr11	66104194	66104309	reg1032858.p1	4.513	+	DQ893675 DQ895838 AB590240 AK297757 TSC_hg19_v1_chr11_-_66103914 BC014417 L36463 NM_004292	-315	-	BC051340 AF279142 TSC_hg19_v1_chr11_-_66084516 AJ295846 BC098158 BC104484 BC105633 NM_020404	-19739	-	TSC_hg19_v1_chr11_+_66059364 NM_153266	-44877	+	BC009834 TSC_hg19_v1_chr11_-_66112576 AF159141 AK310991 NM_001024957 NM_015399	8309	-	CU692428 DQ892706 DQ895957 AK075354 AK098779 AK225182 TSC_hg19_v1_chr11_-_66115101 AK294604 BC021965 AK293715 AF029893 AK098389 NM_006876	10840	-	AF029358 BC093634 BC143335 X86681 TSC_hg19_v1_chr11_-_66139222 AF034102 AF401235 NM_001532	34926	-	DQ893675|RIN1|9610|Ras and Rab interactor 1##DQ895838|RIN1|9610|Ras and Rab interactor 1##AK297757|RIN1|9610|Ras and Rab interactor 1##BC014417|RIN1|9610|Ras and Rab interactor 1##L36463|RIN1|9610|Ras and Rab interactor 1##NM_004292|RIN1|9610|Ras and Rab interactor 1##BC051340|CD248|57124|CD248 molecule, endosialin##AF279142|CD248|57124|CD248 molecule, endosialin##AJ295846|CD248|57124|CD248 molecule, endosialin##BC104484|CD248|57124|CD248 molecule, endosialin##BC105633|CD248|57124|CD248 molecule, endosialin##NM_020404|CD248|57124|CD248 molecule, endosialin##NM_153266|TMEM151A|256472|transmembrane protein 151A##BC009834|BRMS1|25855|breast cancer metastasis suppressor 1##AF159141|BRMS1|25855|breast cancer metastasis suppressor 1##AK310991|BRMS1|25855|breast cancer metastasis suppressor 1##NM_001024957|BRMS1|25855|breast cancer metastasis suppressor 1##NM_015399|BRMS1|25855|breast cancer metastasis suppressor 1##DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AF029358|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC093634|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC143335|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##X86681|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF034102|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF401235|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##NM_001532|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2	0.934027	CTCF.p2:31:0.934
chr1	212489281	212489427	reg1036525.p1	4.513	+	AK302202 NM_001199756	-14207	+	TSC_hg19_v1_chr1_+_212459262 BC022474 AB527512 DQ892361 DQ895568	-29997	+	BC110883 TSC_hg19_v1_chr1_+_212459259	-30140	+	AK295224 CR457268 CU675347 TSC_hg19_v1_chr1_-_212588229 BC006320	98799	-	TSC_hg19_v1_chr1_-_212588235 AK001736	98881	-	TSC_hg19_v1_chr1_-_212588248 AK297200 NM_001198862 AK024066 NM_018252	98898	-	AK302202|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##NM_001199756|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##BC022474|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##DQ892361|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##DQ895568|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##BC110883|PPP2R5A|5525|protein phosphatase 2, regulatory subunit B', alpha##AK295224|TMEM206|55248|transmembrane protein 206##CR457268|TMEM206|55248|transmembrane protein 206##BC006320|TMEM206|55248|transmembrane protein 206##AK001736|TMEM206|55248|transmembrane protein 206##AK297200|TMEM206|55248|transmembrane protein 206##NM_001198862|TMEM206|55248|transmembrane protein 206##AK024066|TMEM206|55248|transmembrane protein 206##NM_018252|TMEM206|55248|transmembrane protein 206	0.873063	CTCF.p2:5:0.873
chr1	243100175	243100241	reg1041097.p2	4.513	+	AK098092 NM_152666	-412211	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	-487438	-	BC132986 BC132988 AF276659 BC127722 NM_001004343	-937834	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	318148	-	TSC_hg19_v1_chr1_-_243418566 AK310003 BC050722	318364	-	TSC_hg19_v1_chr1_-_243418675 NM_001042404 NM_001042405 NM_014812	318483	-	AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa##AK310003|CEP170|9859|centrosomal protein 170kDa##BC050722|CEP170|9859|centrosomal protein 170kDa##NM_001042404|CEP170|9859|centrosomal protein 170kDa##NM_001042405|CEP170|9859|centrosomal protein 170kDa##NM_014812|CEP170|9859|centrosomal protein 170kDa	0.0	
chr1	28502338	28502519	reg1027476.p2	4.513	+	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-87304	-	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-215910	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-240867	+	NM_000952 NM_001164723	1026	-	S52624 AK292053 NM_001164721 NM_001164722	17984	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	57103	-	BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8	0.0	
chr20	52210685	52210778	reg1027823.p1	4.513	+	AF041259 NM_006526	-11096	-	AK302570 NM_001193421	-408910	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	-620953	+	TSC_hg19_v1_chr20_-_52210810 AK290350	68	-	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	476331	-	AK315220 NM_003657	476572	-	AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##AK290350|ZNF217|7764|zinc finger protein 217##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1	0.253958	CTCF.p2:-20:0.254
chr22	22511391	22511562	reg1007938.p2	4.513	+	TSC_hg19_v1_chr22_+_22385369 AF026922	-126111	+	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	-174290	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	-174329	-	X02422 TSC_hg19_v1_chr22_+_22550141	38653	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	38702	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	57788	+	AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57	0.0	
chr5	175875182	175875282	reg1032284.p2	4.513	+	TSC_hg19_v1_chr5_-_175843538 AK300200 NM_001834 NM_007097	-31697	-	CU675411 AB528704 BT007028 CR536577 TSC_hg19_v1_chr5_-_175843440 BC006457 M20470 BC006332	-31791	-	AF151019 TSC_hg19_v1_chr5_-_175815981	-59278	-	NM_014613 TSC_hg19_v1_chr5_+_175875355	129	+	TSC_hg19_v1_chr5_+_175875374 BC001069	143	+	TSC_hg19_v1_chr5_+_175875385 AK304346	150	+	AK300200|CLTB|1212|clathrin, light chain B##NM_001834|CLTB|1212|clathrin, light chain B##NM_007097|CLTB|1212|clathrin, light chain B##BT007028|CLTB|1212|clathrin, light chain B##CR536577|CLTB|1212|clathrin, light chain B##BC006457|CLTB|1212|clathrin, light chain B##M20470|CLTB|1212|clathrin, light chain B##BC006332|CLTB|1212|clathrin, light chain B##AF151019|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##NM_014613|FAF2|23197|Fas associated factor family member 2##BC001069|FAF2|23197|Fas associated factor family member 2##AK304346|FAF2|23197|Fas associated factor family member 2	0.99772	CTCF.p2:13:0.998
chr6	15254465	15254646	reg1019579.p2	4.513	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-5442	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-5654	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-8143	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	408622	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	408735	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	874747	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.0	
chr7	112051353	112051482	reg1025088.p2	4.513	+	TSC_hg19_v1_chr7_+_111846750 AL713791 AK314630 BC020626 AK027128 AF308819 CU676586	-204647	+	AF209198 NM_021994 TSC_hg19_v1_chr7_+_111846702	-204745	+	TSC_hg19_v1_chr7_-_111846458 AK095906 AK309605 NM_014705	-204955	-	TSC_hg19_v1_chr7_+_112063228 AK313211 NM_001007245 NM_001197080 AK315967 AK308066	11775	+	TSC_hg19_v1_chr7_+_112090514 NM_001550 AK225222 BC001272 Y10313 AK297509 AB527574 BT019889 BT019890 CU674634	39186	+	NM_001197079	40695	+	AL713791|ZNF277|11179|zinc finger protein 277##AK314630|ZNF277|11179|zinc finger protein 277##BC020626|ZNF277|11179|zinc finger protein 277##AK027128|ZNF277|11179|zinc finger protein 277##AF308819|ZNF277|11179|zinc finger protein 277##AF209198|ZNF277|11179|zinc finger protein 277##NM_021994|ZNF277|11179|zinc finger protein 277##AK095906|DOCK4|9732|dedicator of cytokinesis 4##AK309605|DOCK4|9732|dedicator of cytokinesis 4##NM_014705|DOCK4|9732|dedicator of cytokinesis 4##AK313211|IFRD1|3475|interferon-related developmental regulator 1##NM_001007245|IFRD1|3475|interferon-related developmental regulator 1##NM_001197080|IFRD1|3475|interferon-related developmental regulator 1##AK315967|IFRD1|3475|interferon-related developmental regulator 1##AK308066|IFRD1|3475|interferon-related developmental regulator 1##NM_001550|IFRD1|3475|interferon-related developmental regulator 1##AK225222|IFRD1|3475|interferon-related developmental regulator 1##BC001272|IFRD1|3475|interferon-related developmental regulator 1##AK297509|IFRD1|3475|interferon-related developmental regulator 1##BT019889|IFRD1|3475|interferon-related developmental regulator 1##BT019890|IFRD1|3475|interferon-related developmental regulator 1##NM_001197079|IFRD1|3475|interferon-related developmental regulator 1	0.0	
chr19	53073554	53073654	reg1024836.p1	4.512	+	TSC_hg19_v1_chr19_+_53073539 NM_018260 AK001753 BC131719 BC136425 BC136426 BC054884 BC080612	-62	+	CR749856 TSC_hg19_v1_chr19_+_53030941 NM_001039886	-42675	+	AB091373 AB091374 AK299106 NM_001099694 TSC_hg19_v1_chr19_+_52956836 AL833487 AB091376 AB091375	-116777	+	BC067346 NM_001172655	312	+	TSC_hg19_v1_chr19_-_53141603 BC032867 AK027518 NM_001105549 NM_001105550 NM_001105551 NM_001105552 NM_001105553 NM_001105554 NM_018300	68020	-	TSC_hg19_v1_chr19_-_53193740 AK289399 AK075066 NM_001242531 NM_001242538	120206	-	NM_018260|ZNF701|55762|zinc finger protein 701##AK001753|ZNF701|55762|zinc finger protein 701##BC131719|ZNF701|55762|zinc finger protein 701##BC136425|ZNF701|55762|zinc finger protein 701##BC136426|ZNF701|55762|zinc finger protein 701##BC054884|ZNF701|55762|zinc finger protein 701##BC080612|ZNF701|55762|zinc finger protein 701##CR749856|ZNF808|388558|zinc finger protein 808##NM_001039886|ZNF808|388558|zinc finger protein 808##AB091373|ZNF578|147660|zinc finger protein 578##AB091374|ZNF578|147660|zinc finger protein 578##AK299106|ZNF578|147660|zinc finger protein 578##NM_001099694|ZNF578|147660|zinc finger protein 578##AB091376|ZNF578|147660|zinc finger protein 578##AB091375|ZNF578|147660|zinc finger protein 578##BC067346|ZNF701|55762|zinc finger protein 701##NM_001172655|ZNF701|55762|zinc finger protein 701##BC032867|ZNF83|55769|zinc finger protein 83##AK027518|ZNF83|55769|zinc finger protein 83##NM_001105549|ZNF83|55769|zinc finger protein 83##NM_001105550|ZNF83|55769|zinc finger protein 83##NM_001105551|ZNF83|55769|zinc finger protein 83##NM_001105552|ZNF83|55769|zinc finger protein 83##NM_001105553|ZNF83|55769|zinc finger protein 83##NM_001105554|ZNF83|55769|zinc finger protein 83##NM_018300|ZNF83|55769|zinc finger protein 83##AK289399|ZNF83|55769|zinc finger protein 83##AK075066|ZNF83|55769|zinc finger protein 83##NM_001242531|ZNF83|55769|zinc finger protein 83##NM_001242538|ZNF83|55769|zinc finger protein 83	0.0	
chr19	7872655	7872780	reg1022888.p2	4.512	+	NM_001144904 NM_001144905 NM_001144906 NM_001144907 NM_001144908 NM_001144909 NM_001144910 NM_001144911 NM_014257 AK292278 BC038851 AF290887 AK304499 AK314704 AB015629 AF245219 AK298084 AK023750 BC110614 AY343913 DQ893779 AY042234 AY042235 AY042236 AY042237 AY042238 AY042239 AY042240	-44624	+	AY042221 AY042222 AY042223 AY042224 AY042225 AY042226 AY042227 AY042228 AY042229 AY042230 AY042231 AY042232 AY042233 AB527563 BC110615 AF290886 AK293089 TSC_hg19_v1_chr19_-_7812421 M98457 AK304190 AK313585 NM_001144893 NM_001144894 NM_001144895 NM_001144896 NM_001144897 NM_001144899 NM_021155	-60288	-	AY203939 BC093691 BC093693 BC143309 AY423706 NM_001244856 NM_198492	-75701	-	TSC_hg19_v1_chr19_+_7895113 NM_145245 BC014111	22459	+	NM_001159944 AB449874	38689	+	AL442075 TSC_hg19_v1_chr19_-_7934829	62100	-	NM_001144904|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144905|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144906|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144907|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144908|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144909|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144910|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144911|CLEC4M|10332|C-type lectin domain family 4, member M##NM_014257|CLEC4M|10332|C-type lectin domain family 4, member M##AK292278|CLEC4M|10332|C-type lectin domain family 4, member M##BC038851|CLEC4M|10332|C-type lectin domain family 4, member M##AF290887|CLEC4M|10332|C-type lectin domain family 4, member M##AK304499|CLEC4M|10332|C-type lectin domain family 4, member M##AK314704|CLEC4M|10332|C-type lectin domain family 4, member M##AB015629|CLEC4M|10332|C-type lectin domain family 4, member M##AF245219|CLEC4M|10332|C-type lectin domain family 4, member M##AK298084|CLEC4M|10332|C-type lectin domain family 4, member M##AK023750|CLEC4M|10332|C-type lectin domain family 4, member M##BC110614|CLEC4M|10332|C-type lectin domain family 4, member M##AY343913|CLEC4M|10332|C-type lectin domain family 4, member M##DQ893779|CLEC4M|10332|C-type lectin domain family 4, member M##AY042234|CLEC4M|10332|C-type lectin domain family 4, member M##AY042235|CLEC4M|10332|C-type lectin domain family 4, member M##AY042236|CLEC4M|10332|C-type lectin domain family 4, member M##AY042237|CLEC4M|10332|C-type lectin domain family 4, member M##AY042238|CLEC4M|10332|C-type lectin domain family 4, member M##AY042239|CLEC4M|10332|C-type lectin domain family 4, member M##AY042240|CLEC4M|10332|C-type lectin domain family 4, member M##AY042221|CD209|30835|CD209 molecule##AY042222|CD209|30835|CD209 molecule##AY042223|CD209|30835|CD209 molecule##AY042224|CD209|30835|CD209 molecule##AY042225|CD209|30835|CD209 molecule##AY042226|CD209|30835|CD209 molecule##AY042227|CD209|30835|CD209 molecule##AY042228|CD209|30835|CD209 molecule##AY042229|CD209|30835|CD209 molecule##AY042230|CD209|30835|CD209 molecule##AY042231|CD209|30835|CD209 molecule##AY042232|CD209|30835|CD209 molecule##AY042233|CD209|30835|CD209 molecule##BC110615|CD209|30835|CD209 molecule##AF290886|CD209|30835|CD209 molecule##AK293089|CD209|30835|CD209 molecule##M98457|CD209|30835|CD209 molecule##AK304190|CD209|30835|CD209 molecule##AK313585|CD209|30835|CD209 molecule##NM_001144893|CD209|30835|CD209 molecule##NM_001144894|CD209|30835|CD209 molecule##NM_001144895|CD209|30835|CD209 molecule##NM_001144896|CD209|30835|CD209 molecule##NM_001144897|CD209|30835|CD209 molecule##NM_001144899|CD209|30835|CD209 molecule##NM_021155|CD209|30835|CD209 molecule##AY203939|CLEC4G|339390|C-type lectin domain family 4, member G##BC093691|CLEC4G|339390|C-type lectin domain family 4, member G##BC093693|CLEC4G|339390|C-type lectin domain family 4, member G##BC143309|CLEC4G|339390|C-type lectin domain family 4, member G##AY423706|CLEC4G|339390|C-type lectin domain family 4, member G##NM_001244856|CLEC4G|339390|C-type lectin domain family 4, member G##NM_198492|CLEC4G|339390|C-type lectin domain family 4, member G##NM_145245|EVI5L|115704|ecotropic viral integration site 5-like##BC014111|EVI5L|115704|ecotropic viral integration site 5-like##NM_001159944|EVI5L|115704|ecotropic viral integration site 5-like##AB449874|EVI5L|115704|ecotropic viral integration site 5-like##AL442075|FLJ22184|80164|putative uncharacterized protein FLJ22184	0.0	
chr11	110238342	110238523	reg1028484.p1	4.511	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	-71119	-	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	-274302	+	AK095101 TSC_hg19_v1_chr11_+_109963524	-274904	+	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	62284	+	AY496266 TSC_hg19_v1_chr11_-_110582834	344371	-	TSC_hg19_v1_chr11_-_110582887 AB037812	344493	-	BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20##AB037812|ARHGAP20|57569|Rho GTPase activating protein 20	0.541281	CTCF.p2:60:0.541
chr11	115250394	115250575	reg1030746.p2	4.511	+	AY309502 TSC_hg19_v1_chr11_-_115088658	-161836	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-701236	+	AK000134 AK225236 TSC_hg19_v1_chr11_-_114466485 NM_001077639 NM_017678	-784006	-	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	124696	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	1393214	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	1408231	-	AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##AK000134|FAM55D|54827|family with sequence similarity 55, member D##AK225236|FAM55D|54827|family with sequence similarity 55, member D##NM_001077639|FAM55D|54827|family with sequence similarity 55, member D##NM_017678|FAM55D|54827|family with sequence similarity 55, member D##AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259	0.022638	
chr1	146714726	146714818	reg1012599.p2	4.511	+	TSC_hg19_v1_chr1_+_146714335 AK298424 AK297135 BC077717 AK293157 BC001171 AF054177 BC043501 BC053354 BC005038	-408	+	NM_004284 TSC_hg19_v1_chr1_+_146714333 EF560738 AF537213 AK001342 AK027631 AK307400	-461	+	AK314647 TSC_hg19_v1_chr1_-_146697221 AK022172 NM_001144829 NM_001144830 NM_001461	-17580	-	NM_004326 Y13620 AK298105 TSC_hg19_v1_chr1_+_147013319	298479	+	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	427722	-	BC013313 NM_181703	517926	-	AK298424|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK297135|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC077717|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK293157|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC001171|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF054177|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC043501|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC053354|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC005038|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##NM_004284|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##EF560738|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF537213|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK001342|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK027631|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK307400|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK314647|FMO5|2330|flavin containing monooxygenase 5##AK022172|FMO5|2330|flavin containing monooxygenase 5##NM_001144829|FMO5|2330|flavin containing monooxygenase 5##NM_001144830|FMO5|2330|flavin containing monooxygenase 5##NM_001461|FMO5|2330|flavin containing monooxygenase 5##NM_004326|BCL9|607|B-cell CLL/lymphoma 9##Y13620|BCL9|607|B-cell CLL/lymphoma 9##AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa	0.992353	CTCF.p2:1:0.992
chr11	65247079	65247171	reg1030845.p2	4.511	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	-53602	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	-54725	+	TSC_hg19_v1_chr11_+_65190274 AK026198	-56847	+	TSC_hg19_v1_chr11_+_65265158 EF177381	18078	+	TSC_hg19_v1_chr11_+_65266515 BC025986 BX538238 FJ209305	19376	+	TSC_hg19_v1_chr11_+_65266869 BC104662	19674	+	AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##EF177381|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BC025986|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BX538238|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)	0.0	
chr1	173378157	173378258	reg1033457.p1	4.511	+	CR542033 D90224 X79929 NM_003326	-201815	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	-203554	-	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	-358151	-	TSC_hg19_v1_chr1_-_173446300 AK127238	68101	-	TSC_hg19_v1_chr1_+_173446473 AK300680	68266	+	TSC_hg19_v1_chr1_+_173446484 BC035857 NM_004905 AK289352 BC025421 D14662 BC053550 CU690218 AJ844621	68320	+	CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK127238|LOC100506023|100506023|uncharacterized LOC100506023##AK300680|PRDX6|9588|peroxiredoxin 6##BC035857|PRDX6|9588|peroxiredoxin 6##NM_004905|PRDX6|9588|peroxiredoxin 6##AK289352|PRDX6|9588|peroxiredoxin 6##BC025421|PRDX6|9588|peroxiredoxin 6##D14662|PRDX6|9588|peroxiredoxin 6##BC053550|PRDX6|9588|peroxiredoxin 6##AJ844621|PRDX6|9588|peroxiredoxin 6	0.015158	
chr17	30896324	30896504	reg1031122.p1	4.511	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-81654	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-81817	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-82343	+	CU688936 AB385376 AB018270 BC146763 NM_015194	307481	-	TSC_hg19_v1_chr17_-_31204141 AK127942	307709	-	TSC_hg19_v1_chr17_-_31204196 BC030602	307799	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.0	
chr19	14097277	14097426	reg1022665.p1	4.511	+	AK027100 AK298489 NM_001146254 NM_001146255	-33154	-	BC080575 NM_138353 TSC_hg19_v1_chr19_+_14063318	-34033	+	TSC_hg19_v1_chr19_+_14063308 AK093072 AX747902	-34053	+	TSC_hg19_v1_chr19_-_14116878 X58964	19563	-	BC049826 TSC_hg19_v1_chr19_-_14117133 AK309824 NM_002918	19778	-	BC140935 AB076563 AF447451 BC110069 NM_080864	41636	+	AK027100|PODNL1|79883|podocan-like 1##AK298489|PODNL1|79883|podocan-like 1##NM_001146254|PODNL1|79883|podocan-like 1##NM_001146255|PODNL1|79883|podocan-like 1##BC080575|DCAF15|90379|DDB1 and CUL4 associated factor 15##NM_138353|DCAF15|90379|DDB1 and CUL4 associated factor 15##AK093072|DCAF15|90379|DDB1 and CUL4 associated factor 15##X58964|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##BC049826|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##AK309824|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##NM_002918|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##BC140935|RLN3|117579|relaxin 3##AB076563|RLN3|117579|relaxin 3##AF447451|RLN3|117579|relaxin 3##BC110069|RLN3|117579|relaxin 3##NM_080864|RLN3|117579|relaxin 3	0.0	
chr2	64455550	64455694	reg1026763.p1	4.511	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-84098	-	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	-209117	-	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	-209360	-	TSC_hg19_v1_chr2_+_64681295 NM_014181	225678	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	226026	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	295862	+	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin	0.0	
chr9	116327753	116327923	reg1033333.p1	4.511	+	TSC_hg19_v1_chr9_+_116327336 AK289666 AK301515 AK310705 NM_134427	-506	+	AF463495 NM_130795 AK096840 BC042555 CU692096 AF490840	-64057	+	TSC_hg19_v1_chr9_+_116226007 AK125059 NM_017790 AK074977	-101824	+	AF006609 NM_021106	15101	+	U27655 AK125094 TSC_hg19_v1_chr9_+_116343207	15350	+	AF490838 NM_144489 AK054584	28372	+	AK289666|RGS3|5998|regulator of G-protein signaling 3##AK301515|RGS3|5998|regulator of G-protein signaling 3##AK310705|RGS3|5998|regulator of G-protein signaling 3##NM_134427|RGS3|5998|regulator of G-protein signaling 3##AF463495|RGS3|5998|regulator of G-protein signaling 3##NM_130795|RGS3|5998|regulator of G-protein signaling 3##AK096840|RGS3|5998|regulator of G-protein signaling 3##BC042555|RGS3|5998|regulator of G-protein signaling 3##AF490840|RGS3|5998|regulator of G-protein signaling 3##AK125059|RGS3|5998|regulator of G-protein signaling 3##NM_017790|RGS3|5998|regulator of G-protein signaling 3##AK074977|RGS3|5998|regulator of G-protein signaling 3##AF006609|RGS3|5998|regulator of G-protein signaling 3##NM_021106|RGS3|5998|regulator of G-protein signaling 3##U27655|RGS3|5998|regulator of G-protein signaling 3##AK125094|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3	0.0	
chr12	92424517	92424662	reg1027270.p1	4.510	+	NM_001920	-847784	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-848009	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-851278	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	115054	-	AJ845165 AJ845166 NM_001025233	393145	+	AJ845168 NM_001025232	397334	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.0	
chr1	31658634	31658741	reg1027833.p1	4.510	+	BX647437 TSC_hg19_v1_chr1_-_31538801	-119904	-	TSC_hg19_v1_chr1_-_31538565 GQ334687 GQ334688 NM_001020658 NM_014676 AK294477	-120095	-	TSC_hg19_v1_chr1_-_31538543 BC013398 D43951 AK291779 AK300457 AF315592 AK096476 AK222605	-120170	-	AK299507 TSC_hg19_v1_chr1_-_31712475	53753	-	NM_024522 TSC_hg19_v1_chr1_-_31712735	54048	-	DQ893627 DQ895442 TSC_hg19_v1_chr1_-_31769633 AK313800 AF090988 AK074516 EF011621 BC001494 NM_004814 AK298823	110943	-	BX647437|PUM1|9698|pumilio homolog 1 (Drosophila)##NM_001020658|PUM1|9698|pumilio homolog 1 (Drosophila)##NM_014676|PUM1|9698|pumilio homolog 1 (Drosophila)##AK294477|PUM1|9698|pumilio homolog 1 (Drosophila)##BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)##D43951|PUM1|9698|pumilio homolog 1 (Drosophila)##AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)##AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)##AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)##AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)##AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)##AK299507|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1##NM_024522|NKAIN1|79570|Na+/K+ transporting ATPase interacting 1##DQ893627|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##DQ895442|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK313800|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AF090988|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK074516|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##EF011621|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##BC001494|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##NM_004814|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)##AK298823|SNRNP40|9410|small nuclear ribonucleoprotein 40kDa (U5)	0.912229	CTCF.p2:13:0.912
chr7	49803808	49803954	reg1030159.p2	4.510	+	AK126220 AY204751 BX647273 NM_152701	-1592826	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-1674926	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	-1675081	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	9389	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	328943	-	NM_001161834	331800	+	AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72	0.026504	
chr12	26427543	26427724	reg1026061.p1	4.509	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-79048	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-79342	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	-149712	-	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	558447	-	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	663276	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	663597	-	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)	0.144932	
chr12	62387626	62387770	reg1032462.p2	4.509	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	-2304559	+	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	-2397781	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-3073396	-	BC050347 NM_178539	198885	-	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	266486	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	472881	+	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)	0.010753	
chr12	68758978	68759159	reg1023147.p1	4.509	+	TSC_hg19_v1_chr12_-_68726142 BC010622 AK297311 BC034945 BC022042 AF267851 BC028355 AK314461 NM_001205028 NM_001205029 NM_017440 NM_020128	-32962	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	-111764	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	-139516	-	TSC_hg19_v1_chr12_+_69004678 NM_001010942 NM_001251917 NM_001251918 NM_001251921 NM_001251922 NM_015646	245578	+	TSC_hg19_v1_chr12_+_69004704 AK312371 BC078173 AK316447 AJ420497 AK298818 AK316543	245627	+	AK301401 AK301428 TSC_hg19_v1_chr12_+_69004708	245640	+	BC010622|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK297311|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC034945|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC022042|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AF267851|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC028355|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK314461|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205028|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205029|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_017440|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_020128|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##NM_001010942|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251917|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251918|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251921|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251922|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_015646|RAP1B|5908|RAP1B, member of RAS oncogene family##AK312371|RAP1B|5908|RAP1B, member of RAS oncogene family##BC078173|RAP1B|5908|RAP1B, member of RAS oncogene family##AK316447|RAP1B|5908|RAP1B, member of RAS oncogene family##AJ420497|RAP1B|5908|RAP1B, member of RAS oncogene family##AK298818|RAP1B|5908|RAP1B, member of RAS oncogene family##AK316543|RAP1B|5908|RAP1B, member of RAS oncogene family##AK301401|RAP1B|5908|RAP1B, member of RAS oncogene family##AK301428|RAP1B|5908|RAP1B, member of RAS oncogene family	0.0	
chr16	29302322	29302503	reg1030711.p2	4.509	+	TSC_hg19_v1_chr16_+_29086310 BC042920 AK225670 AK298442 AK301253	-216107	+	AK307342 NM_001014987 NM_001014988 NM_014387 TSC_hg19_v1_chr16_+_28996403 AJ223280	-306014	+	BC011563 NM_001014989	-306266	+	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	163439	+	BC022832 NM_001031827 NM_001039182	163872	-	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	168814	+	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK307342|LAT|27040|linker for activation of T cells##NM_001014987|LAT|27040|linker for activation of T cells##NM_001014988|LAT|27040|linker for activation of T cells##NM_014387|LAT|27040|linker for activation of T cells##AJ223280|LAT|27040|linker for activation of T cells##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3	0.0	
chr17	43210550	43210663	reg1011809.p1	4.509	+	NM_001135704 TSC_hg19_v1_chr17_+_43209980 BC041143	-624	+	AB075844 AL834392 AB384653 TSC_hg19_v1_chr17_-_43209885 BC072384 AK074240 NM_133373	-791	-	TSC_hg19_v1_chr17_+_43138687 BC006538 BC006569 NM_021079 AF043324 AK291936 AK303517 AB527516 BC008579 AF020500	-71914	+	AK316359 NM_001135705 NM_001135706 NM_001135707 NM_024722 BC022000 AK296167 TSC_hg19_v1_chr17_+_43213056 AK023384 AK075104 BC029164 AB073387	2451	+	NM_006460	14077	+	TSC_hg19_v1_chr17_+_43225841 AK023624 AB021179	15245	+	NM_001135704|ACBD4|79777|acyl-CoA binding domain containing 4##BC041143|ACBD4|79777|acyl-CoA binding domain containing 4##AB075844|PLCD3|113026|phospholipase C, delta 3##AL834392|PLCD3|113026|phospholipase C, delta 3##BC072384|PLCD3|113026|phospholipase C, delta 3##AK074240|PLCD3|113026|phospholipase C, delta 3##NM_133373|PLCD3|113026|phospholipase C, delta 3##BC006538|NMT1|4836|N-myristoyltransferase 1##BC006569|NMT1|4836|N-myristoyltransferase 1##NM_021079|NMT1|4836|N-myristoyltransferase 1##AF043324|NMT1|4836|N-myristoyltransferase 1##AK291936|NMT1|4836|N-myristoyltransferase 1##AK303517|NMT1|4836|N-myristoyltransferase 1##BC008579|NMT1|4836|N-myristoyltransferase 1##AF020500|NMT1|4836|N-myristoyltransferase 1##AK316359|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135705|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135706|ACBD4|79777|acyl-CoA binding domain containing 4##NM_001135707|ACBD4|79777|acyl-CoA binding domain containing 4##NM_024722|ACBD4|79777|acyl-CoA binding domain containing 4##BC022000|ACBD4|79777|acyl-CoA binding domain containing 4##AK296167|ACBD4|79777|acyl-CoA binding domain containing 4##AK023384|ACBD4|79777|acyl-CoA binding domain containing 4##AK075104|ACBD4|79777|acyl-CoA binding domain containing 4##BC029164|ACBD4|79777|acyl-CoA binding domain containing 4##AB073387|ACBD4|79777|acyl-CoA binding domain containing 4##NM_006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK023624|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AB021179|HEXIM1|10614|hexamethylene bis-acetamide inducible 1	0.137703	
chr19	23754738	23754839	reg1029332.p1	4.509	+	TSC_hg19_v1_chr19_-_23598867 BC041431	-155919	-	TSC_hg19_v1_chr19_-_23598839 AK022793	-155944	-	TSC_hg19_v1_chr19_-_23578274 AK300294 L11672 AK291256 NM_003430	-176524	-	AY044432 AK307845 BC032394 AK093669 AX748253 NM_138330	115189	-	BC136346 AK056088 BC062216 TSC_hg19_v1_chr19_-_23941693 AK122869 NM_138286	186847	-	TSC_hg19_v1_chr19_+_23945812 BC071971	191025	+	AK300294|ZNF91|7644|zinc finger protein 91##L11672|ZNF91|7644|zinc finger protein 91##AK291256|ZNF91|7644|zinc finger protein 91##NM_003430|ZNF91|7644|zinc finger protein 91##AY044432|ZNF675|171392|zinc finger protein 675##AK307845|ZNF675|171392|zinc finger protein 675##AK093669|ZNF675|171392|zinc finger protein 675##NM_138330|ZNF675|171392|zinc finger protein 675##BC136346|ZNF681|148213|zinc finger protein 681##AK056088|ZNF681|148213|zinc finger protein 681##BC062216|ZNF681|148213|zinc finger protein 681##AK122869|ZNF681|148213|zinc finger protein 681##NM_138286|ZNF681|148213|zinc finger protein 681##BC071971|RPSAP58|388524|ribosomal protein SA pseudogene 58	0.010441	
chr19	4352893	4353048	reg1005552.p2	4.509	+	NM_001159846 NM_032868 AK027887 AK308468 TSC_hg19_v1_chr19_+_4343562 BC032652	-9411	+	TSC_hg19_v1_chr19_-_4342718 AK125774	-10220	-	AB527779 TSC_hg19_v1_chr19_-_4338790 BC000795 AJ245719 AK000241 NM_001013841 NM_017720	-14172	-	TSC_hg19_v1_chr19_-_4400419 AY364240 CR542087 AB527297 DQ891258 DQ894444 U65999 X99656 AK097616 NM_001199944	47423	-	BC001270 TSC_hg19_v1_chr19_-_4400513 AK315450 BC098565 AK299166 NM_001199943 NM_003025	47583	-	BC067093 NM_005483 BC052620 TSC_hg19_v1_chr19_+_4402664 BC041606 AB527824 U20979 BC005813 BC011560	49746	+	NM_001159846|MPND|84954|MPN domain containing##NM_032868|MPND|84954|MPN domain containing##AK027887|MPND|84954|MPN domain containing##AK308468|MPND|84954|MPN domain containing##BC032652|MPND|84954|MPN domain containing##AK125774|STAP2|55620|signal transducing adaptor family member 2##BC000795|STAP2|55620|signal transducing adaptor family member 2##AJ245719|STAP2|55620|signal transducing adaptor family member 2##AK000241|STAP2|55620|signal transducing adaptor family member 2##NM_001013841|STAP2|55620|signal transducing adaptor family member 2##NM_017720|STAP2|55620|signal transducing adaptor family member 2##AY364240|SH3GL1|6455|SH3-domain GRB2-like 1##CR542087|SH3GL1|6455|SH3-domain GRB2-like 1##DQ891258|SH3GL1|6455|SH3-domain GRB2-like 1##DQ894444|SH3GL1|6455|SH3-domain GRB2-like 1##U65999|SH3GL1|6455|SH3-domain GRB2-like 1##X99656|SH3GL1|6455|SH3-domain GRB2-like 1##AK097616|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199944|SH3GL1|6455|SH3-domain GRB2-like 1##BC001270|SH3GL1|6455|SH3-domain GRB2-like 1##AK315450|SH3GL1|6455|SH3-domain GRB2-like 1##BC098565|SH3GL1|6455|SH3-domain GRB2-like 1##AK299166|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199943|SH3GL1|6455|SH3-domain GRB2-like 1##NM_003025|SH3GL1|6455|SH3-domain GRB2-like 1##BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	0.0	
chr5	158533676	158533857	reg1004936.p1	4.509	+	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	-7024	-	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	-7309	-	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1247676	-	AK304228 NM_001199382	100882	-	AK056513 NM_144726	101067	-	AK311433 AK304435 NM_001199381	101343	-	BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145##AK056513|RNF145|153830|ring finger protein 145##NM_144726|RNF145|153830|ring finger protein 145##AK311433|RNF145|153830|ring finger protein 145##AK304435|RNF145|153830|ring finger protein 145##NM_001199381|RNF145|153830|ring finger protein 145	0.0	
chr10	49652486	49652617	reg1032105.p1	4.508	+	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	-42879	+	TSC_hg19_v1_chr10_+_49514722 AK292523	-137765	+	CR749241 NM_001018071	-169625	-	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	160536	-	TSC_hg19_v1_chr10_-_49864302 AK055937	211754	-	TSC_hg19_v1_chr10_+_49892917 BC034937	240339	+	BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##AK292523|MAPK8|5599|mitogen-activated protein kinase 8##CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22##AK055937|ARHGAP22|58504|Rho GTPase activating protein 22##BC034937|WDFY4|57705|WDFY family member 4	0.628682	CTCF.p2:-13:0.629
chr11	113258645	113258778	reg1034595.p1	4.508	+	AJ541797 NM_178510 AF487542	-152	+	NM_017868 AK023921 TSC_hg19_v1_chr11_+_113185315 AK292331 AK091887 BC011546 BC019086 BC032355	-73421	+	TSC_hg19_v1_chr11_+_112832281 U63041 AK292453	-426405	+	S69899 BC021195 NM_000795 NM_016574 M30625	87264	-	AK295366 BC047222 AK294313 BC028065 BC121802 BC121803 NM_030770 TSC_hg19_v1_chr11_-_113577091 AB028140	318347	-	TSC_hg19_v1_chr11_-_113644415 U54996 BC128264	385700	-	AJ541797|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_178510|ANKK1|255239|ankyrin repeat and kinase domain containing 1##AF487542|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_017868|TTC12|54970|tetratricopeptide repeat domain 12##AK023921|TTC12|54970|tetratricopeptide repeat domain 12##AK292331|TTC12|54970|tetratricopeptide repeat domain 12##AK091887|TTC12|54970|tetratricopeptide repeat domain 12##BC011546|TTC12|54970|tetratricopeptide repeat domain 12##BC019086|TTC12|54970|tetratricopeptide repeat domain 12##BC032355|TTC12|54970|tetratricopeptide repeat domain 12##U63041|NCAM1|4684|neural cell adhesion molecule 1##AK292453|NCAM1|4684|neural cell adhesion molecule 1##S69899|DRD2|1813|dopamine receptor D2##BC021195|DRD2|1813|dopamine receptor D2##NM_000795|DRD2|1813|dopamine receptor D2##NM_016574|DRD2|1813|dopamine receptor D2##M30625|DRD2|1813|dopamine receptor D2##AK295366|TMPRSS5|80975|transmembrane protease, serine 5##BC047222|TMPRSS5|80975|transmembrane protease, serine 5##AK294313|TMPRSS5|80975|transmembrane protease, serine 5##BC028065|TMPRSS5|80975|transmembrane protease, serine 5##BC121802|TMPRSS5|80975|transmembrane protease, serine 5##BC121803|TMPRSS5|80975|transmembrane protease, serine 5##NM_030770|TMPRSS5|80975|transmembrane protease, serine 5##AB028140|TMPRSS5|80975|transmembrane protease, serine 5##U54996|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##BC128264|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)	0.121556	
chr11	13406492	13406591	reg1032391.p1	4.508	+	TSC_hg19_v1_chr11_+_13299403 BC031214 BC034314	-107086	+	TSC_hg19_v1_chr11_+_13299376 AF044288 AK095749	-107159	+	TSC_hg19_v1_chr11_+_13299375 U60415	-107168	+	AK298226 TSC_hg19_v1_chr11_-_13484770 AK310935 AK292392 AK095946 BC005071 AL832981 NM_032320 AF329102	78250	-	V00597 BC096142 BC096143 BC096144 BC096145 NM_000315	111004	-	TSC_hg19_v1_chr11_+_13690212 NM_032228 AY358784	283649	+	BC031214|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AF044288|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK095749|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##U60415|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK298226|BTBD10|84280|BTB (POZ) domain containing 10##AK310935|BTBD10|84280|BTB (POZ) domain containing 10##AK292392|BTBD10|84280|BTB (POZ) domain containing 10##AK095946|BTBD10|84280|BTB (POZ) domain containing 10##BC005071|BTBD10|84280|BTB (POZ) domain containing 10##AL832981|BTBD10|84280|BTB (POZ) domain containing 10##NM_032320|BTBD10|84280|BTB (POZ) domain containing 10##AF329102|BTBD10|84280|BTB (POZ) domain containing 10##V00597|PTH|5741|parathyroid hormone##BC096142|PTH|5741|parathyroid hormone##BC096143|PTH|5741|parathyroid hormone##BC096144|PTH|5741|parathyroid hormone##BC096145|PTH|5741|parathyroid hormone##NM_000315|PTH|5741|parathyroid hormone##NM_032228|FAR1|84188|fatty acyl CoA reductase 1##AY358784|FAR1|84188|fatty acyl CoA reductase 1	0.998483	CTCF.p2:0:0.998
chr1	40771525	40771599	reg1037453.p1	4.508	+	TSC_hg19_v1_chr1_+_40735749 AK027874	-35799	+	TSC_hg19_v1_chr1_+_40723926 EU176257 EU176564	-47625	+	TSC_hg19_v1_chr1_+_40723907 Y13834	-47654	+	M95610 AB590601 TSC_hg19_v1_chr1_-_40782905	11303	-	TSC_hg19_v1_chr1_-_40782958 BC136326 BC136327 NM_001852	11381	-	TSC_hg19_v1_chr1_-_40782992 BC041479	11458	-	AK027874|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##EU176257|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##EU176564|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##Y13834|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##M95610|COL9A2|1298|collagen, type IX, alpha 2##BC136326|COL9A2|1298|collagen, type IX, alpha 2##BC136327|COL9A2|1298|collagen, type IX, alpha 2##NM_001852|COL9A2|1298|collagen, type IX, alpha 2##BC041479|COL9A2|1298|collagen, type IX, alpha 2	0.0	
chr14	74225312	74225493	reg1017545.p2	4.508	+	CR457112 BC039577 AK290980 TSC_hg19_v1_chr14_-_74181085 AF320308 BC007712 NM_006029	-44641	-	NM_001201366 NM_031427 AF542071 BC005343 AL833654 AK315392	-113749	+	DQ082756 NM_001037162	-141855	+	BC015668 TSC_hg19_v1_chr14_-_74226640	1236	-	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	1563	-	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	28517	-	CR457112|PNMA1|9240|paraneoplastic antigen MA1##BC039577|PNMA1|9240|paraneoplastic antigen MA1##AK290980|PNMA1|9240|paraneoplastic antigen MA1##AF320308|PNMA1|9240|paraneoplastic antigen MA1##BC007712|PNMA1|9240|paraneoplastic antigen MA1##NM_006029|PNMA1|9240|paraneoplastic antigen MA1##NM_001201366|DNAL1|83544|dynein, axonemal, light chain 1##NM_031427|DNAL1|83544|dynein, axonemal, light chain 1##AF542071|DNAL1|83544|dynein, axonemal, light chain 1##BC005343|DNAL1|83544|dynein, axonemal, light chain 1##AL833654|DNAL1|83544|dynein, axonemal, light chain 1##AK315392|DNAL1|83544|dynein, axonemal, light chain 1##DQ082756|ACOT6|641372|acyl-CoA thioesterase 6##NM_001037162|ACOT6|641372|acyl-CoA thioesterase 6##BC015668|C14orf43|91748|chromosome 14 open reading frame 43##AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43	0.0	
chr15	96390070	96390191	reg1028204.p2	4.508	+	TSC_hg19_v1_chr15_-_95870310 BC040875	-519811	-	NM_001159644 BC025708 BC111024 AK002037	-1490821	+	NM_001159643 NM_018349 AY656717 BC131527	-1548669	+	BC106083 NM_001145155 FM208183	479031	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	483847	+	AK316086 NM_001145156	485663	+	BC040875|LOC400456|400456|uncharacterized LOC400456##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.0	
chr4	100919266	100919446	reg1028959.p2	4.508	+	TSC_hg19_v1_chr4_+_100871641 AK123926	-47710	+	TSC_hg19_v1_chr4_-_100871513 AK056803 NM_002106 BC103743	-47842	-	AY597416 BC018002 BC020936 D28450 TSC_hg19_v1_chr4_-_100871433	-47900	-	AL832277 BC013592 TSC_hg19_v1_chr4_-_101111626 AK312926 AK094236 NM_145244	192274	-	CU676062 AB590686 AB034695 AK222741 AK304568 AK291831 BC017781 AF205940 AK026875 AK313504 NM_001159694 NM_016242	519804	-	AB385587 AB451338 AB451487 AM393486 AM393713 CU693026 AY904364 BC025714 TSC_hg19_v1_chr4_-_102268080 L14778	1348670	-	AK123926|LOC256880|256880|uncharacterized LOC256880##AK056803|H2AFZ|3015|H2A histone family, member Z##NM_002106|H2AFZ|3015|H2A histone family, member Z##BC103743|H2AFZ|3015|H2A histone family, member Z##AY597416|H2AFZ|3015|H2A histone family, member Z##BC018002|H2AFZ|3015|H2A histone family, member Z##BC020936|H2AFZ|3015|H2A histone family, member Z##D28450|H2AFZ|3015|H2A histone family, member Z##AL832277|DDIT4L|115265|DNA-damage-inducible transcript 4-like##BC013592|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK312926|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK094236|DDIT4L|115265|DNA-damage-inducible transcript 4-like##NM_145244|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AB034695|EMCN|51705|endomucin##AK222741|EMCN|51705|endomucin##AK304568|EMCN|51705|endomucin##AK291831|EMCN|51705|endomucin##BC017781|EMCN|51705|endomucin##AF205940|EMCN|51705|endomucin##AK026875|EMCN|51705|endomucin##AK313504|EMCN|51705|endomucin##NM_001159694|EMCN|51705|endomucin##NM_016242|EMCN|51705|endomucin##AB451338|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AB451487|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393486|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393713|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AY904364|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##BC025714|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##L14778|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	0.910715	CTCF.p2:-31:0.911
chr12	124884294	124884440	reg1027656.p2	4.507	+	AK126577 NM_181709	-110658	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-426638	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-427168	-	TSC_hg19_v1_chr12_-_125002875 BC033087	118492	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	167708	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	463938	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.013324	
chr17	2126522	2126675	reg1031431.p1	4.507	+	DQ187313 NM_001098202	-167041	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-168200	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-181290	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	80214	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	80442	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	80654	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.012739	
chr3	158377580	158377726	reg1033952.p1	4.507	+	TSC_hg19_v1_chr3_+_158362392 CU690604	-15237	+	TSC_hg19_v1_chr3_+_158362373 AK315031	-15272	+	TSC_hg19_v1_chr3_+_158362361 AF309777 AF367998 AK000780 NM_024996 BC049210	-15324	+	CU678961 EU831968 EU832061 AF087851 AF282594 AF282626 BC008438 BC005346 NM_020169	12720	-	DQ891333 DQ893367 DQ894516 DQ896684 BC029640 TSC_hg19_v1_chr3_-_158450211	72555	-	U27185 AK130079 TSC_hg19_v1_chr3_-_158450247	72588	-	AK315031|GFM1|85476|G elongation factor, mitochondrial 1##AF309777|GFM1|85476|G elongation factor, mitochondrial 1##AF367998|GFM1|85476|G elongation factor, mitochondrial 1##AK000780|GFM1|85476|G elongation factor, mitochondrial 1##NM_024996|GFM1|85476|G elongation factor, mitochondrial 1##BC049210|GFM1|85476|G elongation factor, mitochondrial 1##EU831968|LXN|56925|latexin##EU832061|LXN|56925|latexin##AF087851|LXN|56925|latexin##AF282594|LXN|56925|latexin##AF282626|LXN|56925|latexin##BC008438|LXN|56925|latexin##BC005346|LXN|56925|latexin##NM_020169|LXN|56925|latexin##DQ891333|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ893367|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ894516|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##DQ896684|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##BC029640|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##U27185|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1##AK130079|RARRES1|5918|retinoic acid receptor responder (tazarotene induced) 1	0.692369	CTCF.p2:11:0.692
chr3	189496462	189496562	reg1028301.p2	4.507	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-147253	+	AK125682 NM_198485 BC101550 BC101552	-606701	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-831542	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	11006	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	342183	-	NM_018192	342395	-	BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1	0.0	
chr3	51426920	51427042	reg1027892.p1	4.507	+	TSC_hg19_v1_chr3_+_51422721 BC113588 BC113590 AK292243 BC007282 BT007110 EU832655 EU832733 BC033055	-4200	+	NM_006010 TSC_hg19_v1_chr3_+_51422691	-4290	+	AY254099 NM_004947 AY145303	-714299	+	NM_013286 TSC_hg19_v1_chr3_+_51428706	1721	+	TSC_hg19_v1_chr3_+_51428730 BC121184 BC139836	1769	+	BC022792 TSC_hg19_v1_chr3_-_51533986	106968	-	BC113588|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113590|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AK292243|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC007282|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BT007110|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832655|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832733|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC033055|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##NM_006010|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AY254099|DOCK3|1795|dedicator of cytokinesis 3##NM_004947|DOCK3|1795|dedicator of cytokinesis 3##AY145303|DOCK3|1795|dedicator of cytokinesis 3##NM_013286|RBM15B|29890|RNA binding motif protein 15B##BC121184|RBM15B|29890|RNA binding motif protein 15B##BC139836|RBM15B|29890|RNA binding motif protein 15B##BC022792|VPRBP|9730|Vpr (HIV-1) binding protein	0.999074	CTCF.p2:-17:0.999
chr6	37016708	37016888	reg1032793.p1	4.507	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-43297	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-62528	-	AK022783 TSC_hg19_v1_chr6_-_36953950 AF176006 AF192559 BC125055 BC153873 NM_014341 BC110914	-62821	-	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	121324	+	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	208588	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	208801	+	BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##AK022783|MTCH1|23787|mitochondrial carrier 1##AF176006|MTCH1|23787|mitochondrial carrier 1##AF192559|MTCH1|23787|mitochondrial carrier 1##BC125055|MTCH1|23787|mitochondrial carrier 1##BC153873|MTCH1|23787|mitochondrial carrier 1##NM_014341|MTCH1|23787|mitochondrial carrier 1##BC110914|MTCH1|23787|mitochondrial carrier 1##NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B	0.0	
chr7	157847943	157848040	reg1027186.p1	4.507	+	TSC_hg19_v1_chr7_+_157647233 BC034557	-200717	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	-718280	+	TSC_hg19_v1_chr7_+_157023934 AK098447	-823985	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	532462	-	BC028618 TSC_hg19_v1_chr7_-_158497496 AK092008 AX747307 BC043404 BX537845 NM_017760	649486	-	TSC_hg19_v1_chr7_-_158611303 AK126214	763379	-	BC034557|LOC100506585|100506585|uncharacterized LOC100506585##AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC028618|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK092008|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BC043404|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BX537845|NCAPG2|54892|non-SMC condensin II complex, subunit G2##NM_017760|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK126214|ESYT2|57488|extended synaptotagmin-like protein 2	0.830068	CTCF.p2:-6:0.830
chr17	66324123	66324208	reg1029848.p2	4.506	+	AX750577 AX750581 U79745 AK313121 AK290417 BC064832 NM_001174166 NM_004694	-36835	-	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	-68831	+	TSC_hg19_v1_chr17_+_66244233 AF208856	-79922	+	AY691424 CU691786 TSC_hg19_v1_chr17_-_66453638 BC039867 AK301830 AK000917 NM_017983	129446	-	TSC_hg19_v1_chr17_+_66508140 NM_212471 Y07642	183958	+	TSC_hg19_v1_chr17_+_66508161 BC093042	184001	+	AX750581|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G##AY691424|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##BC039867|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK301830|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK000917|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_017983|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_212471|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##Y07642|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC093042|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	0.934648	CTCF.p2:-8:0.935
chr18	286614	286722	reg1026269.p1	4.506	+	AK097544 TSC_hg19_v1_chr18_+_268153	-18515	+	TSC_hg19_v1_chr18_-_268046 AY573302 AY573303 CU679685 DQ892768 EU176747 AK225709 L36529 AK314755 AK225067 BC010381 NM_005131	-18635	-	TSC_hg19_v1_chr18_+_158587 U30888 AB528508 DQ890594 DQ893762 CU678498 BT007183	-128026	+	AB005145 TSC_hg19_v1_chr18_-_500702 BC060789 AB038518 NM_130386	214016	-	BC029515 NM_004066 U03270 AK312047 CU688680 DQ890970 DQ894144	293714	+	BC025381 NM_014410 AK299319	310341	+	AY573302|THOC1|9984|THO complex 1##AY573303|THOC1|9984|THO complex 1##DQ892768|THOC1|9984|THO complex 1##EU176747|THOC1|9984|THO complex 1##AK225709|THOC1|9984|THO complex 1##L36529|THOC1|9984|THO complex 1##AK314755|THOC1|9984|THO complex 1##AK225067|THOC1|9984|THO complex 1##BC010381|THOC1|9984|THO complex 1##NM_005131|THOC1|9984|THO complex 1##U30888|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##DQ890594|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##DQ893762|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##BT007183|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AB005145|COLEC12|81035|collectin sub-family member 12##BC060789|COLEC12|81035|collectin sub-family member 12##AB038518|COLEC12|81035|collectin sub-family member 12##NM_130386|COLEC12|81035|collectin sub-family member 12##BC029515|CETN1|1068|centrin, EF-hand protein, 1##NM_004066|CETN1|1068|centrin, EF-hand protein, 1##U03270|CETN1|1068|centrin, EF-hand protein, 1##AK312047|CETN1|1068|centrin, EF-hand protein, 1##DQ890970|CETN1|1068|centrin, EF-hand protein, 1##DQ894144|CETN1|1068|centrin, EF-hand protein, 1##BC025381|CLUL1|27098|clusterin-like 1 (retinal)##NM_014410|CLUL1|27098|clusterin-like 1 (retinal)##AK299319|CLUL1|27098|clusterin-like 1 (retinal)	0.031101	
chr3	103015006	103015121	reg1026789.p1	4.506	+	AY090780 NM_175056 BC143817	-861196	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-1446689	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-1468103	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	2070517	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	2070759	+	CR749655 TSC_hg19_v1_chr3_-_105421064	2405991	-	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.396239	CTCF.p2:-44:0.396
chr4	185172133	185172252	reg1030293.p1	4.506	+	BC035035 AY358676 AK057370 NM_153343	-33127	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-344281	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-344372	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	223489	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	398409	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	398641	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.991401	CTCF.p2:-10:0.991
chr9	102847166	102847294	reg1027965.p2	4.506	+	TSC_hg19_v1_chr9_+_102677458 BC101564 BC101566 BC143430 BC039048	-169770	+	TSC_hg19_v1_chr9_+_102668954 BC111009 AK000658 BC070269 AK095262 AL833620	-178229	+	AK311412 TSC_hg19_v1_chr9_+_102668952	-178278	+	AB383909 AJ344330 TSC_hg19_v1_chr9_-_102861281 AB011145 AY359048 BX648519	13972	-	TSC_hg19_v1_chr9_-_102861295 BC005374	14063	-	TSC_hg19_v1_chr9_-_102861305 AK075024 NM_015051	14091	-	BC101564|STX17|55014|syntaxin 17##BC101566|STX17|55014|syntaxin 17##BC143430|STX17|55014|syntaxin 17##BC111009|STX17|55014|syntaxin 17##AK000658|STX17|55014|syntaxin 17##BC070269|STX17|55014|syntaxin 17##AK095262|STX17|55014|syntaxin 17##AL833620|STX17|55014|syntaxin 17##AK311412|STX17|55014|syntaxin 17##AJ344330|ERP44|23071|endoplasmic reticulum protein 44##AB011145|ERP44|23071|endoplasmic reticulum protein 44##AY359048|ERP44|23071|endoplasmic reticulum protein 44##BX648519|ERP44|23071|endoplasmic reticulum protein 44##BC005374|ERP44|23071|endoplasmic reticulum protein 44##AK075024|ERP44|23071|endoplasmic reticulum protein 44##NM_015051|ERP44|23071|endoplasmic reticulum protein 44	0.0	
chr9	132793536	132793605	reg1029824.p2	4.506	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-195805	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-195848	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-195886	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	11784	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	11918	-	BC039728 NM_001136557 NM_001136558 NM_020960	22414	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr1	15059624	15059774	reg1026724.p1	4.505	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	-134505	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-983758	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-983776	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	191020	+	AY505121 NM_001018001	196596	+	AY505122 NM_001017999	212715	+	AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein	0.0	
chr15	44092545	44092662	reg1028879.p1	4.505	+	BC113988 DQ103711 NM_001033517 BX647438	-389	-	TSC_hg19_v1_chr15_+_44084524 AF320073 BC022326 AK000479 AK307547 BC015491 AK000438 AK095876 BC038893 NM_001199878	-8058	+	TSC_hg19_v1_chr15_+_44084493 AL049976 AF073298	-8099	+	NM_001199885 NM_016400 BC019262	16	+	TSC_hg19_v1_chr15_+_44092806 AK022435 AF161485 AF049613	199	+	AB463886 CU690792 DQ893389 DQ896709 TSC_hg19_v1_chr15_-_44116882 U04209 BC023557 BC050742 AK312867 NM_005926	24255	-	DQ103711|SERINC4|619189|serine incorporator 4##NM_001033517|SERINC4|619189|serine incorporator 4##BX647438|SERINC4|619189|serine incorporator 4##AF320073|SERF2|10169|small EDRK-rich factor 2##BC022326|SERF2|10169|small EDRK-rich factor 2##AK000479|SERF2|10169|small EDRK-rich factor 2##AK307547|SERF2|10169|small EDRK-rich factor 2##BC015491|SERF2|10169|small EDRK-rich factor 2##AK000438|SERF2-C15ORF63|100529067|SERF2-C15orf63 readthrough##AK095876|SERF2-C15ORF63|100529067|SERF2-C15orf63 readthrough##BC038893|SERF2|10169|small EDRK-rich factor 2##NM_001199878|SERF2|10169|small EDRK-rich factor 2##AL049976|SERF2|10169|small EDRK-rich factor 2##AF073298|SERF2|10169|small EDRK-rich factor 2##NM_001199885|C15orf63|25764|chromosome 15 open reading frame 63##NM_016400|C15orf63|25764|chromosome 15 open reading frame 63##BC019262|C15orf63|25764|chromosome 15 open reading frame 63##AK022435|C15orf63|25764|chromosome 15 open reading frame 63##AF161485|C15orf63|25764|chromosome 15 open reading frame 63##AF049613|C15orf63|25764|chromosome 15 open reading frame 63##DQ893389|MFAP1|4236|microfibrillar-associated protein 1##DQ896709|MFAP1|4236|microfibrillar-associated protein 1##U04209|MFAP1|4236|microfibrillar-associated protein 1##BC023557|MFAP1|4236|microfibrillar-associated protein 1##BC050742|MFAP1|4236|microfibrillar-associated protein 1##AK312867|MFAP1|4236|microfibrillar-associated protein 1##NM_005926|MFAP1|4236|microfibrillar-associated protein 1	0.0	
chr16	3508042	3508131	reg1027776.p2	4.505	+	TSC_hg19_v1_chr16_+_3493690 NM_001083601 AK297219 AL833594	-14404	+	BC029899 NM_152457 AK057633	-14592	-	TSC_hg19_v1_chr16_+_3451250 NM_001032292 NM_003450 BC001161 BC000876 U31248	-56800	+	TSC_hg19_v1_chr16_+_3508044 NM_001083600 NM_024845 AK092005 AK298566 AK024216 AK130792 AK225178 AK311524 AY358543 AK302361	59	+	AK095819 TSC_hg19_v1_chr16_+_3533613	25460	+	NM_001080524	37334	-	NM_001083601|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK297219|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AL833594|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##BC029899|ZNF597|146434|zinc finger protein 597##NM_152457|ZNF597|146434|zinc finger protein 597##AK057633|ZNF597|146434|zinc finger protein 597##NM_001032292|ZNF174|7727|zinc finger protein 174##NM_003450|ZNF174|7727|zinc finger protein 174##BC001161|ZNF174|7727|zinc finger protein 174##BC000876|ZNF174|7727|zinc finger protein 174##U31248|ZNF174|7727|zinc finger protein 174##NM_001083600|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##NM_024845|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK092005|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK298566|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK024216|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK130792|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK225178|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK311524|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AY358543|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK302361|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK095819|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##NM_001080524|C16orf90|646174|chromosome 16 open reading frame 90	0.258598	
chr18	13577364	13577530	reg1028612.p1	4.505	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-358662	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-586102	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-629383	+	NM_001003674 NM_001003675	34217	+	AF009426 AF009427 NM_004338 NM_181483	43419	+	TSC_hg19_v1_chr18_-_13726549 AK055618	149059	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.0	
chr2	157749145	157749261	reg1033641.p1	4.505	+	TSC_hg19_v1_chr2_+_157292921 U12424 BC019874	-456249	+	TSC_hg19_v1_chr2_+_157292894 NM_000408 AK292817	-456337	+	TSC_hg19_v1_chr2_+_157292178 AB209399 U36310 AK299645	-456969	+	BC142676 BC142703 AY277591 NM_014568 AK292154 BC144211	365090	+	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	433081	-	NM_001009959 AK296477	434953	-	U12424|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC019874|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_000408|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK292817|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AB209399|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U36310|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK299645|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein	0.730768	CTCF.p2:0:0.731
chr6	108435065	108435139	reg1004216.p2	4.505	+	TSC_hg19_v1_chr6_-_108395940 BC016376 NM_014028	-39163	-	TSC_hg19_v1_chr6_-_108395924 AF533891 AY358795 BC059412 AK129854	-39172	-	TSC_hg19_v1_chr6_-_108395920 BC068581	-39182	-	NM_003269 AF220532	52135	+	BT007114 CR456898 CU677753 EU831975 EU832068 TSC_hg19_v1_chr6_-_108582163 AF062483 AB047360 AF034546	147041	-	TSC_hg19_v1_chr6_-_108582217 BC008444	147092	-	BC016376|OSTM1|28962|osteopetrosis associated transmembrane protein 1##NM_014028|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AF533891|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AY358795|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC059412|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AK129854|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC068581|OSTM1|28962|osteopetrosis associated transmembrane protein 1##NM_003269|NR2E1|7101|nuclear receptor subfamily 2, group E, member 1##AF220532|NR2E1|7101|nuclear receptor subfamily 2, group E, member 1##BT007114|SNX3|8724|sorting nexin 3##CR456898|SNX3|8724|sorting nexin 3##EU831975|SNX3|8724|sorting nexin 3##EU832068|SNX3|8724|sorting nexin 3##AF062483|SNX3|8724|sorting nexin 3##AB047360|SNX3|8724|sorting nexin 3##AF034546|SNX3|8724|sorting nexin 3##BC008444|SNX3|8724|sorting nexin 3	0.0	
chr13	68310829	68310901	reg1030148.p1	4.504	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-506361	-	AK289924 NM_022843	-6321211	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-6321612	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	2371676	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	4129394	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	4129898	-	BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)	0.096967	
chr15	20988681	20988798	reg1009675.p1	4.504	+	NM_001145004	-241626	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-277302	-	None	None	None	NM_207355 BC066981	83239	-	NM_207355 BC066981	1094399	-	BC136985 NM_001004719	1379738	+	NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2	0.212698	CTCF.p2:-18:0.213
chr15	45020852	45020965	reg1033468.p1	4.504	+	TSC_hg19_v1_chr15_+_45003710 NM_004048 AK303560 AK315776 S82297 S82300 S54761 BC032589 BC064910 X07621 AY007153 AB021288 AB463439 AY187687 CR457066 DQ839493 DQ839494 DQ884406 DQ890551 DQ893711 V00567	-17187	+	AK130783 TSC_hg19_v1_chr15_-_45003540	-17362	-	BC036924 NM_001145112	-51823	-	AK311550 TSC_hg19_v1_chr15_+_45021275 DQ232883	345	+	BC031266 TSC_hg19_v1_chr15_+_45021331	423	+	NM_080745 NM_182985	7651	+	NM_004048|B2M|567|beta-2-microglobulin##AK303560|B2M|567|beta-2-microglobulin##AK315776|B2M|567|beta-2-microglobulin##S82297|B2M|567|beta-2-microglobulin##S82300|B2M|567|beta-2-microglobulin##S54761|B2M|567|beta-2-microglobulin##BC032589|B2M|567|beta-2-microglobulin##BC064910|B2M|567|beta-2-microglobulin##X07621|B2M|567|beta-2-microglobulin##AY007153|B2M|567|beta-2-microglobulin##AB021288|B2M|567|beta-2-microglobulin##AY187687|B2M|567|beta-2-microglobulin##CR457066|B2M|567|beta-2-microglobulin##DQ839493|B2M|567|beta-2-microglobulin##DQ839494|B2M|567|beta-2-microglobulin##DQ884406|B2M|567|beta-2-microglobulin##DQ890551|B2M|567|beta-2-microglobulin##DQ893711|B2M|567|beta-2-microglobulin##V00567|B2M|567|beta-2-microglobulin##BC036924|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##NM_001145112|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##DQ232883|TRIM69|140691|tripartite motif containing 69##BC031266|TRIM69|140691|tripartite motif containing 69##NM_080745|TRIM69|140691|tripartite motif containing 69##NM_182985|TRIM69|140691|tripartite motif containing 69	0.0	
chr21	45616330	45616488	reg1024889.p2	4.504	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-62848	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-62904	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-89110	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	44357	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	44448	-	AF194032 NM_013369 NM_175867	65689	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr2	58273691	58273818	reg1032162.p1	4.504	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	0	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-1860845	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-1861988	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	234	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	194728	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	2506768	-	AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)	0.0	
chr3	128303389	128303503	reg1029260.p2	4.504	+	AF008192 NM_007354	-8518	-	BC051342 BC002557 NM_032638 BX647499 TSC_hg19_v1_chr3_-_128212044	-91410	-	TSC_hg19_v1_chr3_-_128207374 AK314826 NM_001145661	-96076	-	BC007995 TSC_hg19_v1_chr3_-_128369648 CR456742 AB527671 CU679817	66140	-	TSC_hg19_v1_chr3_-_128369662 AK297941 AK312369 AK296905 CR749284 BC010839 AK223595	66236	-	TSC_hg19_v1_chr3_-_128369724 NM_002950	66292	-	AF008192|C3orf27|23434|chromosome 3 open reading frame 27##NM_007354|C3orf27|23434|chromosome 3 open reading frame 27##BC051342|GATA2|2624|GATA binding protein 2##BC002557|GATA2|2624|GATA binding protein 2##NM_032638|GATA2|2624|GATA binding protein 2##BX647499|GATA2|2624|GATA binding protein 2##AK314826|GATA2|2624|GATA binding protein 2##NM_001145661|GATA2|2624|GATA binding protein 2##BC007995|RPN1|6184|ribophorin I##CR456742|RPN1|6184|ribophorin I##AK297941|RPN1|6184|ribophorin I##AK312369|RPN1|6184|ribophorin I##AK296905|RPN1|6184|ribophorin I##CR749284|RPN1|6184|ribophorin I##BC010839|RPN1|6184|ribophorin I##AK223595|RPN1|6184|ribophorin I##NM_002950|RPN1|6184|ribophorin I	0.480442	CTCF.p2:0:0.467
chr3	156782216	156782397	reg1031229.p2	4.504	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-238195	+	BC034397 NM_001184718	-387854	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-388891	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	95603	-	NM_020307 AK122738	96208	-	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	372344	+	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long	0.0	
chr7	120954482	120954586	reg1028160.p2	4.504	+	AK025639 AK225313 TSC_hg19_v1_chr7_+_120702920	-251661	+	NM_001105533	-325090	+	TSC_hg19_v1_chr7_+_120628867 AL832638	-325638	+	AF152584 NM_016087	10886	+	AF169963 NM_057168	14555	+	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	81803	-	AK025639|C7orf58|79974|chromosome 7 open reading frame 58##AK225313|C7orf58|79974|chromosome 7 open reading frame 58##NM_001105533|C7orf58|79974|chromosome 7 open reading frame 58##AL832638|C7orf58|79974|chromosome 7 open reading frame 58##AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C	0.787134	CTCF.p2:-34:0.787
chr9	123659662	123659822	reg1027204.p2	4.504	+	BC108663 NM_001009936 NM_015651 TSC_hg19_v1_chr9_-_123639617	-20142	-	TSC_hg19_v1_chr9_-_123639471 AK122744 BC022374 AK303433	-20264	-	AK096706 TSC_hg19_v1_chr9_+_123605361 BX648532 BC028086 BC052374 BC040969	-54368	+	AK295959 NM_001190947	17107	-	AB590501 BT019408 CU692854 TSC_hg19_v1_chr9_-_123688443 U19261 BC024145	28661	-	AK090468 NM_005658	29430	-	BC108663|PHF19|26147|PHD finger protein 19##NM_001009936|PHF19|26147|PHD finger protein 19##NM_015651|PHF19|26147|PHD finger protein 19##AK122744|PHF19|26147|PHD finger protein 19##BC022374|PHF19|26147|PHD finger protein 19##AK303433|PHF19|26147|PHD finger protein 19##AK096706|LOC253039|253039|uncharacterized LOC253039##BX648532|LOC253039|253039|uncharacterized LOC253039##BC028086|LOC253039|253039|uncharacterized LOC253039##BC052374|LOC253039|253039|uncharacterized LOC253039##BC040969|LOC253039|253039|uncharacterized LOC253039##AK295959|TRAF1|7185|TNF receptor-associated factor 1##NM_001190947|TRAF1|7185|TNF receptor-associated factor 1##BT019408|TRAF1|7185|TNF receptor-associated factor 1##U19261|TRAF1|7185|TNF receptor-associated factor 1##BC024145|TRAF1|7185|TNF receptor-associated factor 1##AK090468|TRAF1|7185|TNF receptor-associated factor 1##NM_005658|TRAF1|7185|TNF receptor-associated factor 1	0.064162	
chr9	21402931	21403107	reg1032060.p1	4.504	+	AY255838 V00548 AB590747 CR541921 JN848522 BC074936 BC074937 BC104163 BC104164 M54886 V00544 V00549 NM_000605	-17693	-	AB464595 CU686802 HQ258738 JN848523 BC093988 BC112002 BC069427 NM_006900	-34980	-	AB590746 BC069471 BC096697 BC096710 BC096730 BC098357 NM_021002	-52134	-	K01900 NM_002170 BC104828 BC104830 V00545 V00550	6121	+	NM_024013 V00538 V00537 BC112300 BC112302 BC074928 BC074929 AB464595 CU686802 HQ258738 JN848523	37460	+	AY358570 NM_176891	79292	-	AY255838|IFNA2|3440|interferon, alpha 2##V00548|IFNA2|3440|interferon, alpha 2##CR541921|IFNA2|3440|interferon, alpha 2##BC074936|IFNA2|3440|interferon, alpha 2##BC074937|IFNA2|3440|interferon, alpha 2##BC104163|IFNA2|3440|interferon, alpha 2##BC104164|IFNA2|3440|interferon, alpha 2##M54886|IFNA2|3440|interferon, alpha 2##V00544|IFNA2|3440|interferon, alpha 2##V00549|IFNA2|3440|interferon, alpha 2##NM_000605|IFNA2|3440|interferon, alpha 2##HQ258738|IFNA1|3439|interferon, alpha 1##BC093988|IFNA13|3447|interferon, alpha 13##BC112002|IFNA1|3439|interferon, alpha 1##BC069427|IFNA13|3447|interferon, alpha 13##NM_006900|IFNA13|3447|interferon, alpha 13##BC069471|IFNA6|3443|interferon, alpha 6##BC096697|IFNA6|3443|interferon, alpha 6##BC096710|IFNA6|3443|interferon, alpha 6##BC096730|IFNA6|3443|interferon, alpha 6##BC098357|IFNA6|3443|interferon, alpha 6##NM_021002|IFNA6|3443|interferon, alpha 6##K01900|IFNA8|3445|interferon, alpha 8##NM_002170|IFNA8|3445|interferon, alpha 8##BC104828|IFNA8|3445|interferon, alpha 8##BC104830|IFNA8|3445|interferon, alpha 8##V00545|IFNA8|3445|interferon, alpha 8##V00550|IFNA8|3445|interferon, alpha 8##NM_024013|IFNA1|3439|interferon, alpha 1##V00538|IFNA1|3439|interferon, alpha 1##V00537|IFNA1|3439|interferon, alpha 1##BC112300|IFNA1|3439|interferon, alpha 1##BC112302|IFNA1|3439|interferon, alpha 1##BC074928|IFNA1|3439|interferon, alpha 1##BC074929|IFNA1|3439|interferon, alpha 1##HQ258738|IFNA1|3439|interferon, alpha 1##AY358570|IFNE|338376|interferon, epsilon##NM_176891|IFNE|338376|interferon, epsilon	0.0	
chr1	116915790	116915945	reg1029070.p2	4.503	+	NM_000701 TSC_hg19_v1_chr1_+_116915824	-56	+	AK096035 NM_152367	-261492	+	TSC_hg19_v1_chr1_+_116519194 BC070033 AY358258 AY145501 CU693234 DQ892367 DQ895576	-396638	+	BC003077 TSC_hg19_v1_chr1_+_116915881 BC050359	15	+	TSC_hg19_v1_chr1_+_116915952 AK314777	81	+	AK308418 TSC_hg19_v1_chr1_+_116916033 DQ891882 EU176649	211	+	NM_000701|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)##BC070033|SLC22A15|55356|solute carrier family 22, member 15##AY358258|SLC22A15|55356|solute carrier family 22, member 15##AY145501|SLC22A15|55356|solute carrier family 22, member 15##DQ892367|SLC22A15|55356|solute carrier family 22, member 15##DQ895576|SLC22A15|55356|solute carrier family 22, member 15##BC003077|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC050359|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK314777|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK308418|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##DQ891882|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##EU176649|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.0	
chr17	28422858	28422948	reg1025329.p2	4.503	+	NM_198529 BX648689 BC137519	-154199	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	-165770	-	AK302745 AK303060 NM_001145053 AK299608	-166007	+	TSC_hg19_v1_chr17_+_28443846 AK297102 AL136806 NM_032141 AK094552 BC062425 AK313963 BC105044 BC105046 BC143417 BC143539 BC046116 BC040118 AF161358 BC016313 AB462988 AM392705 AM392719 CR533555	20938	+	NM_001045	140050	-	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	196056	-	NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AK297102|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AL136806|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_032141|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK094552|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC062425|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK313963|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105044|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105046|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143417|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143539|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC046116|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC040118|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AF161358|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC016313|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392705|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392719|NSRP1|84081|nuclear speckle splicing regulatory protein 1##CR533555|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_001045|SLC6A4|6532|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase	0.027324	
chr3	127794553	127794665	reg1030462.p1	4.503	+	TSC_hg19_v1_chr3_+_127771342 AB528869	-23243	+	TSC_hg19_v1_chr3_+_127771307 AF346602	-23287	+	TSC_hg19_v1_chr3_+_127771300 AL832821 BC002951 AF077032 AF084458	-23313	+	AB451224 AB451347 AB590226 BT007057 DQ469310 DQ891448 DQ894627 BC012886 TSC_hg19_v1_chr3_-_127842656 AB012122 AF099084 BC000519 BC002993 AF070735 AJ010058 AK222575 Y18418 AK222563 AK312290 NM_003707	48014	-	TSC_hg19_v1_chr3_+_127872314 NM_021937	77700	+	TSC_hg19_v1_chr3_+_127872325 BC007933 AF268872	77829	+	AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AL832821|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##BC002951|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF077032|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF084458|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AB451224|RUVBL1|8607|RuvB-like 1 (E. coli)##AB451347|RUVBL1|8607|RuvB-like 1 (E. coli)##BT007057|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ469310|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ891448|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ894627|RUVBL1|8607|RuvB-like 1 (E. coli)##BC012886|RUVBL1|8607|RuvB-like 1 (E. coli)##AB012122|RUVBL1|8607|RuvB-like 1 (E. coli)##AF099084|RUVBL1|8607|RuvB-like 1 (E. coli)##BC002993|RUVBL1|8607|RuvB-like 1 (E. coli)##AF070735|RUVBL1|8607|RuvB-like 1 (E. coli)##AJ010058|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222575|RUVBL1|8607|RuvB-like 1 (E. coli)##Y18418|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222563|RUVBL1|8607|RuvB-like 1 (E. coli)##AK312290|RUVBL1|8607|RuvB-like 1 (E. coli)##NM_003707|RUVBL1|8607|RuvB-like 1 (E. coli)##NM_021937|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##BC007933|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AF268872|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific	0.196859	
chr1	156326851	156326973	reg1036024.p1	4.502	+	TSC_hg19_v1_chr1_-_156308103 NM_001008800 NM_005998	-18760	-	TSC_hg19_v1_chr1_-_156308084 AL833197 AB208882 AK308023	-18836	-	BC008019 TSC_hg19_v1_chr1_-_156308049 AK315923 AK126400	-18858	-	AF193807 AK290840 AK294641 AK303799 AK303814 AY139092 AY139093 NM_020407 AK308556 TSC_hg19_v1_chr1_+_156339022 AK054780 BC065218	12109	+	NM_006365 U49857 BC059943 BC107686 BC050448 TSC_hg19_v1_chr1_-_156399219 AK095626 BC054045	72364	-	BC040949 TSC_hg19_v1_chr1_-_156460409	133491	-	NM_001008800|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_005998|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AL833197|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AB208882|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK308023|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##BC008019|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK315923|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK126400|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AF193807|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK290840|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK294641|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303799|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303814|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139092|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139093|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_020407|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK308556|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK054780|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##BC065218|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_006365|C1orf61|10485|chromosome 1 open reading frame 61##U49857|C1orf61|10485|chromosome 1 open reading frame 61##BC059943|C1orf61|10485|chromosome 1 open reading frame 61##BC107686|C1orf61|10485|chromosome 1 open reading frame 61##BC050448|C1orf61|10485|chromosome 1 open reading frame 61##AK095626|C1orf61|10485|chromosome 1 open reading frame 61##BC054045|C1orf61|10485|chromosome 1 open reading frame 61##BC040949|MEF2D|4209|myocyte enhancer factor 2D	0.926193	CTCF.p2:-15:0.926
chr11	88014635	88014752	reg1033902.p1	4.502	+	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	-106101	-	AK024853 TSC_hg19_v1_chr11_+_87032449	-982251	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	-1265715	+	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	56174	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	56209	-	TSC_hg19_v1_chr11_-_88070905 BX537913 NM_001114173 NM_001814 NM_148170	56238	-	BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family##AK024853|TMEM135|65084|transmembrane protein 135##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C##BX537913|CTSC|1075|cathepsin C##NM_001114173|CTSC|1075|cathepsin C##NM_001814|CTSC|1075|cathepsin C##NM_148170|CTSC|1075|cathepsin C	0.80967	CTCF.p2:0:0.810
chr20	42657751	42657828	reg1023660.p1	4.502	+	NM_001098798	-83254	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	-112996	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	-114302	+	AL132999 TSC_hg19_v1_chr20_-_42815818 AK304863	158004	-	BC029957 NM_020433 NM_175913	158428	-	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	181567	-	NM_001098798|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##AL132999|JPH2|57158|junctophilin 2##AK304863|JPH2|57158|junctophilin 2##BC029957|JPH2|57158|junctophilin 2##NM_020433|JPH2|57158|junctophilin 2##NM_175913|JPH2|57158|junctophilin 2##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111	0.0	
chr4	151967220	151967358	reg1034373.p1	4.502	+	TSC_hg19_v1_chr4_-_151936880 AK098039	-30399	-	AF216648 NM_006726	-30641	-	TSC_hg19_v1_chr4_-_151936437 AF467287 NM_001199282 BC064834	-30871	-	TSC_hg19_v1_chr4_+_152020753 NM_001006 BC001708 M84711 AK308947 BC070211 AK291075 AK296121 BC066926 D28374 AK129825 AK311788 M77234 BC009404 BC018954 BC000204 BC004981 BC009219 BC017123 BC071916 L13802 BC006298 DQ891143 DQ894322 AB464167 CU688198	53478	+	X75686 BC108890 BC108891 BC108892 BC108893 NM_001128924	129390	-	BC032404 BX647422 NM_001009555 NM_001128923	180300	-	AK098039|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##AF216648|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_006726|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##AF467287|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_001199282|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##BC064834|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_001006|RPS3A|6189|ribosomal protein S3A##BC001708|RPS3A|6189|ribosomal protein S3A##M84711|RPS3A|6189|ribosomal protein S3A##AK308947|RPS3A|6189|ribosomal protein S3A##BC070211|RPS3A|6189|ribosomal protein S3A##AK291075|RPS3A|6189|ribosomal protein S3A##BC066926|RPS3A|6189|ribosomal protein S3A##D28374|RPS3A|6189|ribosomal protein S3A##AK129825|RPS3A|6189|ribosomal protein S3A##AK311788|RPS3A|6189|ribosomal protein S3A##M77234|RPS3A|6189|ribosomal protein S3A##BC009404|RPS3A|6189|ribosomal protein S3A##BC018954|RPS3A|6189|ribosomal protein S3A##BC000204|RPS3A|6189|ribosomal protein S3A##BC004981|RPS3A|6189|ribosomal protein S3A##BC009219|RPS3A|6189|ribosomal protein S3A##BC017123|RPS3A|6189|ribosomal protein S3A##BC071916|RPS3A|6189|ribosomal protein S3A##L13802|RPS3A|6189|ribosomal protein S3A##BC006298|RPS3A|6189|ribosomal protein S3A##DQ891143|RPS3A|6189|ribosomal protein S3A##DQ894322|RPS3A|6189|ribosomal protein S3A##BC108890|SH3D19|152503|SH3 domain containing 19##BC108891|SH3D19|152503|SH3 domain containing 19##BC108892|SH3D19|152503|SH3 domain containing 19##BC108893|SH3D19|152503|SH3 domain containing 19##NM_001128924|SH3D19|152503|SH3 domain containing 19##BC032404|SH3D19|152503|SH3 domain containing 19##BX647422|SH3D19|152503|SH3 domain containing 19##NM_001009555|SH3D19|152503|SH3 domain containing 19##NM_001128923|SH3D19|152503|SH3 domain containing 19	0.040468	
chr6	139695659	139695840	reg1031451.p2	4.502	+	NM_001168389 NM_001168388	-326	-	TSC_hg19_v1_chr6_-_139613136 BX647633 AL834248 AL831988 AK314725 BX647477 BC115383 BC115384 AB085905 NM_153235	-82589	-	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	-239493	+	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	12	-	NM_006079 TSC_hg19_v1_chr6_-_139695784	35	-	BC095542 GU727635 M73482 NM_002511	2714115	-	NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BX647633|TXLNB|167838|taxilin beta##AL834248|TXLNB|167838|taxilin beta##AL831988|TXLNB|167838|taxilin beta##AK314725|TXLNB|167838|taxilin beta##BX647477|TXLNB|167838|taxilin beta##BC115383|TXLNB|167838|taxilin beta##BC115384|TXLNB|167838|taxilin beta##AB085905|TXLNB|167838|taxilin beta##NM_153235|TXLNB|167838|taxilin beta##BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor	0.0	
chr7	130126080	130126190	reg1016692.p2	4.502	+	TSC_hg19_v1_chr7_+_130126173 AK098397 NM_177524 CR627364 BC090049	-19	+	BC056162 AK314676 TSC_hg19_v1_chr7_-_130080886 BC018789 AK026098 AJ278890 NM_018718 AK298618 AK311382 AF429308 AF429309	-45258	-	NM_001868 AK131054 AK291493 AK293366 BC005279 X67318 CU675077 DQ890565 DQ893728 BT007313	-105810	+	NM_177525	5037	+	TSC_hg19_v1_chr7_+_130131926 D87367 BC011908 D78611 Y11534 BC002413 BC014564 BC018695 NM_002402 AK298984 AK312688	5831	+	TSC_hg19_v1_chr7_+_130132096 AB590216 DQ890762 DQ892764 DQ893925 DQ896009 CU680110 BT007056 CR457040	5989	+	AK098397|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_177524|MEST|4232|mesoderm specific transcript homolog (mouse)##CR627364|MEST|4232|mesoderm specific transcript homolog (mouse)##BC090049|MEST|4232|mesoderm specific transcript homolog (mouse)##BC056162|CEP41|95681|centrosomal protein 41kDa##AK314676|CEP41|95681|centrosomal protein 41kDa##BC018789|CEP41|95681|centrosomal protein 41kDa##AK026098|CEP41|95681|centrosomal protein 41kDa##AJ278890|CEP41|95681|centrosomal protein 41kDa##NM_018718|CEP41|95681|centrosomal protein 41kDa##AK298618|CEP41|95681|centrosomal protein 41kDa##AK311382|CEP41|95681|centrosomal protein 41kDa##AF429308|CEP41|95681|centrosomal protein 41kDa##AF429309|CEP41|95681|centrosomal protein 41kDa##NM_001868|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK131054|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK291493|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK293366|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC005279|CPA1|1357|carboxypeptidase A1 (pancreatic)##X67318|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ890565|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ893728|CPA1|1357|carboxypeptidase A1 (pancreatic)##BT007313|CPA1|1357|carboxypeptidase A1 (pancreatic)##NM_177525|MEST|4232|mesoderm specific transcript homolog (mouse)##D87367|MEST|4232|mesoderm specific transcript homolog (mouse)##BC011908|MEST|4232|mesoderm specific transcript homolog (mouse)##D78611|MEST|4232|mesoderm specific transcript homolog (mouse)##Y11534|MEST|4232|mesoderm specific transcript homolog (mouse)##BC002413|MEST|4232|mesoderm specific transcript homolog (mouse)##BC014564|MEST|4232|mesoderm specific transcript homolog (mouse)##BC018695|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_002402|MEST|4232|mesoderm specific transcript homolog (mouse)##AK298984|MEST|4232|mesoderm specific transcript homolog (mouse)##AK312688|MEST|4232|mesoderm specific transcript homolog (mouse)##DQ890762|MEST|4232|mesoderm specific transcript homolog (mouse)##DQ892764|MEST|4232|mesoderm specific transcript homolog (mouse)##DQ893925|MEST|4232|mesoderm specific transcript homolog (mouse)##DQ896009|MEST|4232|mesoderm specific transcript homolog (mouse)##BT007056|MEST|4232|mesoderm specific transcript homolog (mouse)##CR457040|MEST|4232|mesoderm specific transcript homolog (mouse)	0.0	
chr10	52268278	52268404	reg1026386.p2	4.501	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-260001	-	NM_018232	-430456	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-440619	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	115362	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	231369	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	377052	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.0	
chr11	8588101	8588236	reg1009858.p1	4.501	+	BC069752 BC069793 M26682 NM_002315	-302816	-	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	-397605	-	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-485369	+	AK093251 AX748014 BC031231 NM_030906	27289	-	AK293193 TSC_hg19_v1_chr11_-_8615705	27535	-	TSC_hg19_v1_chr11_-_8615752 AK092720 AX747689 AK310754	27607	-	BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33##AK293193|STK33|65975|serine/threonine kinase 33##AK092720|STK33|65975|serine/threonine kinase 33##AK310754|STK33|65975|serine/threonine kinase 33	0.0	
chr1	49336425	49336532	reg1031402.p2	4.501	+	BC011804 AK021650 CU675869 NM_024603 BC007932	-93981	-	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	-398633	-	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	-398800	-	TSC_hg19_v1_chr1_-_50489560 BC035739 AK094826 AK294394	1153069	-	TSC_hg19_v1_chr1_-_50489627 AK294633 AK296221 NM_032785	1153169	-	AK297338 NM_001144777	1177207	+	BC011804|BEND5|79656|BEN domain containing 5##AK021650|BEND5|79656|BEN domain containing 5##NM_024603|BEND5|79656|BEN domain containing 5##BC007932|BEND5|79656|BEN domain containing 5##AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##BC035739|AGBL4|84871|ATP/GTP binding protein-like 4##AK094826|AGBL4|84871|ATP/GTP binding protein-like 4##AK294394|AGBL4|84871|ATP/GTP binding protein-like 4##AK294633|AGBL4|84871|ATP/GTP binding protein-like 4##AK296221|AGBL4|84871|ATP/GTP binding protein-like 4##NM_032785|AGBL4|84871|ATP/GTP binding protein-like 4##AK297338|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_001144777|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	0.92379	CTCF.p2:-5:0.924
chr16	89489021	89489149	reg1023778.p1	4.501	+	AK293862 NM_001242885	-101545	+	BC041585 TSC_hg19_v1_chr16_-_89351073	-138129	-	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	-139011	-	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	67846	-	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	85729	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	137980	+	AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC041585|ANKRD11|29123|ankyrin repeat domain 11##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13	0.0	
chr17	7426674	7426760	reg1007468.p2	4.501	+	TSC_hg19_v1_chr17_+_7388113 CU688278	-38601	+	TSC_hg19_v1_chr17_+_7387773 BC137231 BC067295	-38862	+	AK293777 TSC_hg19_v1_chr17_+_7387688 NM_000937 X63564	-39025	+	BC019047 NM_003809 NM_172089 BC071837 AF055872 AY358870 AY081051 BC104420 AF030099	25696	+	TSC_hg19_v1_chr17_+_7461620 NM_001198622 NM_001198623 NM_001198624 NM_003808 NM_172087 NM_172088	34899	+	AK225556 AK314518 AK301221 AF046888 AF114011 AY081050 AF114013 AF114012 AF184972 AY358880 BC008042 TSC_hg19_v1_chr17_+_7462318 DQ149579 EF211088 EU831984 EU832077 AF136294 BT019561 BT019562 CR542040 CR542073	35493	+	BC137231|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##BC067295|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##AK293777|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##NM_000937|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##X63564|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##BC019047|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_003809|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_172089|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough##BC071837|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AF055872|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AY358870|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AY081051|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough##BC104420|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AF030099|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_001198622|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198623|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198624|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_003808|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_172087|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_172088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK225556|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK314518|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK301221|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF046888|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114011|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AY081050|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114013|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114012|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF184972|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AY358880|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BC008042|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##DQ149579|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EF211088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EU831984|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EU832077|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF136294|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BT019561|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BT019562|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##CR542040|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##CR542073|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13	0.0	
chr18	60067393	60067533	reg1028677.p2	4.501	+	AB209762 AF018253 NM_003839 AB527346	-74913	+	TSC_hg19_v1_chr18_+_59855176 AB384606	-212253	+	TSC_hg19_v1_chr18_+_59854540 BX648481	-212875	+	NM_017742 TSC_hg19_v1_chr18_+_60190696 BC006340	123291	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	315201	+	TSC_hg19_v1_chr18_+_60383911 AB011178	316463	+	AB209762|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##AF018253|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_003839|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##BX648481|KIAA1468|57614|KIAA1468##NM_017742|ZCCHC2|54877|zinc finger, CCHC domain containing 2##BC006340|ZCCHC2|54877|zinc finger, CCHC domain containing 2##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1	0.36109	CTCF.p2:-1:0.361
chr20	46127333	46127400	reg1025626.p2	4.501	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-141878	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-150719	-	TSC_hg19_v1_chr20_-_45927496 BC030721	-199797	-	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	3256	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	3318	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	287386	-	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2	0.0	
chr11	58969012	58969114	reg1026766.p1	4.500	+	TSC_hg19_v1_chr11_+_58940008 AB023154 AB385405	-29034	+	TSC_hg19_v1_chr11_+_58939648 NM_015177	-29378	+	NM_022074 NM_198847 AK291453 BC071759 AK092061 AX747338	-56784	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	11344	-	BC140917 NM_001004729	162844	+	NM_001001954 BC136991	221373	-	AB023154|DTX4|23220|deltex homolog 4 (Drosophila)##NM_015177|DTX4|23220|deltex homolog 4 (Drosophila)##NM_022074|FAM111A|63901|family with sequence similarity 111, member A##NM_198847|FAM111A|63901|family with sequence similarity 111, member A##AK291453|FAM111A|63901|family with sequence similarity 111, member A##BC071759|FAM111A|63901|family with sequence similarity 111, member A##AK092061|FAM111A|63901|family with sequence similarity 111, member A##BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1##BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001001954|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC136991|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2	0.31477	CTCF.p2:29:0.255
chr15	37103389	37103493	reg1028457.p2	4.500	+	NM_032499	-170636	+	TSC_hg19_v1_chr15_+_36871914 NM_001130010 AK026504 BC006254	-231542	+	CU688170 TSC_hg19_v1_chr15_-_35838365 BC066652 AK094007 AL833427 AX748407 AK125017 NM_001141972 NM_080650	-1265055	-	CU674744 EU831754 EU831831 TSC_hg19_v1_chr15_-_37390403 AK294411 AK311546 AK056038 NM_172315	287025	-	AK056620 NM_172316 AB463111 CU690674 EU446635 EU831824 AK055936	288198	-	TSC_hg19_v1_chr15_-_37391935 AF178948 AF179896 AF179897 AF179898 AF179899	288478	-	NM_032499|C15orf41|84529|chromosome 15 open reading frame 41##NM_001130010|C15orf41|84529|chromosome 15 open reading frame 41##AK026504|C15orf41|84529|chromosome 15 open reading frame 41##BC006254|C15orf41|84529|chromosome 15 open reading frame 41##BC066652|ATPBD4|89978|ATP binding domain 4##AK094007|ATPBD4|89978|ATP binding domain 4##AL833427|ATPBD4|89978|ATP binding domain 4##AK125017|ATPBD4|89978|ATP binding domain 4##NM_001141972|ATPBD4|89978|ATP binding domain 4##NM_080650|ATPBD4|89978|ATP binding domain 4##EU831754|MEIS2|4212|Meis homeobox 2##EU831831|MEIS2|4212|Meis homeobox 2##AK294411|MEIS2|4212|Meis homeobox 2##AK311546|MEIS2|4212|Meis homeobox 2##AK056038|MEIS2|4212|Meis homeobox 2##NM_172315|MEIS2|4212|Meis homeobox 2##AK056620|MEIS2|4212|Meis homeobox 2##NM_172316|MEIS2|4212|Meis homeobox 2##EU446635|MEIS2|4212|Meis homeobox 2##EU831824|MEIS2|4212|Meis homeobox 2##AK055936|MEIS2|4212|Meis homeobox 2##AF178948|MEIS2|4212|Meis homeobox 2##AF179896|MEIS2|4212|Meis homeobox 2##AF179897|MEIS2|4212|Meis homeobox 2##AF179898|MEIS2|4212|Meis homeobox 2##AF179899|MEIS2|4212|Meis homeobox 2	0.0	
chr22	37559846	37559975	reg1029501.p5	4.500	+	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	-13958	-	CR456446 TSC_hg19_v1_chr22_-_37505748	-54232	-	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	-60335	-	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	24381	-	BC042068 NM_001051 AK291165	48473	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	80311	-	BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##CR456446|TMPRSS6|164656|transmembrane protease, serine 6##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)	0.0	
chr3	47032226	47032397	reg1027677.p1	4.500	+	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	-2841	+	TSC_hg19_v1_chr3_+_47021155 NM_015175 AK131104 AB384492	-11064	+	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	-14066	-	TSC_hg19_v1_chr3_-_47098906 AK026837	66632	-	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	173128	-	BC015311 NM_001134878 NM_022342 NM_182902	291984	-	AK092871|NBEAL2|23218|neurobeachin-like 2##NM_015175|NBEAL2|23218|neurobeachin-like 2##AK131104|NBEAL2|23218|neurobeachin-like 2##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12##AK026837|SETD2|29072|SET domain containing 2##AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9	0.0	
chr7	34205692	34205782	reg1032166.p1	4.500	+	AK289963 NM_133468 AK096150 BC060868	-260595	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-1036656	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-1056760	-	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	492182	+	DQ287932 NM_015283	871915	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	1020055	-	AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)	0.993427	CTCF.p2:7:0.993
chr9	132176266	132176447	reg1021760.p4	4.500	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-93061	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-235816	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-235849	-	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	74998	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	75085	+	BC112353 AK093122 AX747938 NM_199350	206681	-	AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50	0.0	
chr11	27340543	27340692	reg1034593.p1	4.499	+	NM_003986	-278109	+	TSC_hg19_v1_chr11_+_27015837 BC026873	-324773	+	TSC_hg19_v1_chr11_+_27015673 AK310616	-324947	+	AF382034 TSC_hg19_v1_chr11_-_27384763 AY598334 CU678989 AK313358 BC008496 AK308494 NM_030771 NM_080654	44149	-	TSC_hg19_v1_chr11_-_27494323 AB209743 AF257182 BC033039 NM_018490	153687	-	AB385247 BC053907 TSC_hg19_v1_chr11_-_27528315 BC009774 AK223156 AL833601 AK002077 NM_018362	187695	-	NM_003986|BBOX1|8424|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1##BC026873|FIBIN|387758|fin bud initiation factor homolog (zebrafish)##AF382034|CCDC34|91057|coiled-coil domain containing 34##AY598334|CCDC34|91057|coiled-coil domain containing 34##AK313358|CCDC34|91057|coiled-coil domain containing 34##BC008496|CCDC34|91057|coiled-coil domain containing 34##AK308494|CCDC34|91057|coiled-coil domain containing 34##NM_030771|CCDC34|91057|coiled-coil domain containing 34##NM_080654|CCDC34|91057|coiled-coil domain containing 34##AB209743|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF257182|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC033039|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##NM_018490|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)##BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)##AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)##AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)##AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)##NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)	0.0	
chr17	25334917	25335016	reg1033996.p2	4.499	+	NM_001190452	-3312530	+	TSC_hg19_v1_chr17_-_21454933 AK056436 BC132738 BC136630 BC019938 BC010612 BC052777 BC053952 NM_001113434	-3880043	-	FJ434338 NM_001194958	-4026519	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	286156	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	286315	+	BC035488 BC042106 NM_014238	464063	+	NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##AK056436|C17orf51|339263|chromosome 17 open reading frame 51##BC132738|C17orf51|339263|chromosome 17 open reading frame 51##BC136630|C17orf51|339263|chromosome 17 open reading frame 51##BC019938|C17orf51|339263|chromosome 17 open reading frame 51##BC010612|C17orf51|339263|chromosome 17 open reading frame 51##BC052777|C17orf51|339263|chromosome 17 open reading frame 51##BC053952|C17orf51|339263|chromosome 17 open reading frame 51##NM_001113434|C17orf51|339263|chromosome 17 open reading frame 51##FJ434338|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##NM_001194958|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1	0.990444	CTCF.p2:-8:0.990
chr17	56618760	56618880	reg1030029.p1	4.499	+	AK301914 AK302146 NM_001198713	-642	-	BC018056 U88870 AK295527 AK315396 TSC_hg19_v1_chr17_-_56609427 AF176379 AK308957 NM_080415 NM_080416	-9402	-	BC018055 TSC_hg19_v1_chr17_-_56609363	-9458	-	AK097440 BC022189 NM_001038704	2887	-	AK308299 BC040526 AK125896 BC045647 AL834143 NM_001201457 NM_031272 NM_198393	150575	-	TSC_hg19_v1_chr17_+_56769933 BC107753	151115	+	AK301914|SEPT4|5414|septin 4##AK302146|SEPT4|5414|septin 4##NM_001198713|SEPT4|5414|septin 4##BC018056|SEPT4|5414|septin 4##U88870|SEPT4|5414|septin 4##AK295527|SEPT4|5414|septin 4##AK315396|SEPT4|5414|septin 4##AF176379|SEPT4|5414|septin 4##AK308957|SEPT4|5414|septin 4##NM_080415|SEPT4|5414|septin 4##NM_080416|SEPT4|5414|septin 4##BC018055|SEPT4|5414|septin 4##AK097440|C17orf47|284083|chromosome 17 open reading frame 47##BC022189|C17orf47|284083|chromosome 17 open reading frame 47##NM_001038704|C17orf47|284083|chromosome 17 open reading frame 47##AK308299|TEX14|56155|testis expressed 14##BC040526|TEX14|56155|testis expressed 14##AK125896|TEX14|56155|testis expressed 14##BC045647|TEX14|56155|testis expressed 14##AL834143|TEX14|56155|testis expressed 14##NM_001201457|TEX14|56155|testis expressed 14##NM_031272|TEX14|56155|testis expressed 14##NM_198393|TEX14|56155|testis expressed 14##BC107753|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	0.932706	CTCF.p2:-31:0.933
chr20	5672713	5672830	reg1030571.p1	4.499	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	-81184	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-377735	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-565076	+	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	58295	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	219355	+	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	258352	-	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	0.0	
chr22	39349952	39350131	reg1024654.p1	4.499	+	TSC_hg19_v1_chr22_-_39268255 AK094829 NM_014292	-81737	-	TSC_hg19_v1_chr22_-_39268222 BC012111 AK293035	-81820	-	TSC_hg19_v1_chr22_-_39268213 CU680218 CU687960 DQ893667 DQ895787 BC064900	-81850	-	NM_001193289 NM_145699 U03891 BC126416 BC144146 CR456393 AB528063 CU012950 CU013238 HQ258100	3569	+	AK024854 NM_004900 U61084 CT841510 AB527109 AB528064 AB528855 CU012951 CU012954 CU013239 CU013242 CU691044 AY743217 EU527884	28390	+	TSC_hg19_v1_chr22_+_39410261 AK313272 AF165520 BC011739 NM_014508 BC021080	60210	+	AK094829|CBX6|23466|chromobox homolog 6##NM_014292|CBX6|23466|chromobox homolog 6##BC012111|CBX6|23466|chromobox homolog 6##AK293035|CBX6|23466|chromobox homolog 6##DQ893667|CBX6|23466|chromobox homolog 6##DQ895787|CBX6|23466|chromobox homolog 6##BC064900|CBX6|23466|chromobox homolog 6##NM_001193289|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##NM_145699|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##U03891|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC126416|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC144146|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CR456393|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU012950|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU013238|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##HQ258100|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##AK024854|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##NM_004900|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##U61084|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CT841510|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012951|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012954|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##CU013239|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU013242|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AY743217|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##EU527884|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AK313272|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AF165520|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC011739|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##NM_014508|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC021080|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	0.255139	CTCF.p2:-1:0.255
chr2	65206140	65206305	reg1030090.p1	4.499	+	TSC_hg19_v1_chr2_-_65159574 BC037562	-46645	-	TSC_hg19_v1_chr2_-_65090764 AK097952	-115481	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-325175	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	9378	+	TSC_hg19_v1_chr2_+_65216485 AK298472 AK315986 NM_003038	10269	+	TSC_hg19_v1_chr2_+_65216532 AK223486 AK313052 BC072423 BC026216 L14595 L19444 AB026689 DQ891127 DQ894306	10428	+	BC037562|LOC400958|400958|uncharacterized LOC400958##D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK223486|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK313052|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC072423|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC026216|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L14595|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L19444|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AB026689|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ891127|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ894306|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.02771	
chr3	165057674	165057826	reg1030663.p1	4.499	+	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	-143245	-	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	-261472	-	NM_001080440	-3843155	+	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	497443	-	NM_000055 TSC_hg19_v1_chr3_-_165555283	497517	-	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	2040327	-	BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001080440|OTOL1|131149|otolin 1##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##NM_000055|BCHE|590|butyrylcholinesterase##AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing	0.88197	CTCF.p2:-15:0.882
chr5	131998821	131999002	reg1019245.p1	4.499	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	-5021	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-106271	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	-119719	-	NM_000589 NM_172348	10461	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	74306	-	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	84233	+	BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A##AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2	0.013125	
chr9	37262687	37262784	reg1015023.p2	4.499	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-142152	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-142227	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-142249	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	159971	+	BC010007 TSC_hg19_v1_chr9_-_37465267	202525	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	202660	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.0	
chr12	31004297	31004478	reg1011182.p2	4.498	+	AY074490 AY074491 NM_001002259 NM_001206856 NM_023925 NM_032156	-96940	-	TSC_hg19_v1_chr12_-_30848807 NM_006390	-155521	-	U77494 TSC_hg19_v1_chr12_-_30848794	-155617	-	TSC_hg19_v1_chr12_+_31079362 BC084571	74974	+	TSC_hg19_v1_chr12_+_31079681 AK293947	75273	+	AK300920 NM_001080509 TSC_hg19_v1_chr12_+_31079866 BC146917 BC146922	75477	+	AY074490|CAPRIN2|65981|caprin family member 2##AY074491|CAPRIN2|65981|caprin family member 2##NM_001002259|CAPRIN2|65981|caprin family member 2##NM_001206856|CAPRIN2|65981|caprin family member 2##NM_023925|CAPRIN2|65981|caprin family member 2##NM_032156|CAPRIN2|65981|caprin family member 2##NM_006390|IPO8|10526|importin 8##U77494|IPO8|10526|importin 8##AK293947|TSPAN11|441631|tetraspanin 11##AK300920|TSPAN11|441631|tetraspanin 11##NM_001080509|TSPAN11|441631|tetraspanin 11##BC146917|TSPAN11|441631|tetraspanin 11##BC146922|TSPAN11|441631|tetraspanin 11	0.0	
chr18	66592639	66592801	reg1032542.p2	4.498	+	NM_024781 CR749520	-127378	+	NM_001093729 AK308114 AK091108	-210201	+	TSC_hg19_v1_chr18_-_66382346 AK122715 BC107422 NM_019022 BX647846 AK310389	-210284	-	TSC_hg19_v1_chr18_+_67068214 NM_152721 AY599248 BC096744	475510	+	AK313199 TSC_hg19_v1_chr18_-_67615110	1022379	-	GU935335 GU935336 U56102 NM_006566	1031475	-	NM_024781|CCDC102B|79839|coiled-coil domain containing 102B##CR749520|CCDC102B|79839|coiled-coil domain containing 102B##NM_001093729|CCDC102B|79839|coiled-coil domain containing 102B##AK308114|CCDC102B|79839|coiled-coil domain containing 102B##AK091108|CCDC102B|79839|coiled-coil domain containing 102B##AK122715|TMX3|54495|thioredoxin-related transmembrane protein 3##BC107422|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_019022|TMX3|54495|thioredoxin-related transmembrane protein 3##BX647846|TMX3|54495|thioredoxin-related transmembrane protein 3##AK310389|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_152721|DOK6|220164|docking protein 6##AY599248|DOK6|220164|docking protein 6##BC096744|DOK6|220164|docking protein 6##AK313199|CD226|10666|CD226 molecule##GU935335|CD226|10666|CD226 molecule##GU935336|CD226|10666|CD226 molecule##U56102|CD226|10666|CD226 molecule##NM_006566|CD226|10666|CD226 molecule	0.0	
chr2	137067821	137068001	reg1027736.p2	4.498	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-192235	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-194113	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-324695	-	TSC_hg19_v1_chr2_+_137523114 AK299929	455205	+	NM_001080427	680550	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1654023	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.0	
chr5	131861059	131861238	reg1029046.p1	4.498	+	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	-34667	-	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-114520	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-155640	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	18044	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	31492	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	132742	+	X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13	0.0	
chr9	137109748	137109857	reg1031112.p1	4.498	+	AJ011376 NM_052821 AB464354	-104848	+	AK000552 TSC_hg19_v1_chr9_+_137001248 AK025810	-108553	+	TSC_hg19_v1_chr9_+_137001223 BC001635	-108577	+	TSC_hg19_v1_chr9_+_137218317 BC063827 NM_002957	108513	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	108598	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	423845	+	AJ011376|WDR5|11091|WD repeat domain 5##NM_052821|WDR5|11091|WD repeat domain 5##AK000552|WDR5|11091|WD repeat domain 5##AK025810|WDR5|11091|WD repeat domain 5##BC001635|WDR5|11091|WD repeat domain 5##BC063827|RXRA|6256|retinoid X receptor, alpha##NM_002957|RXRA|6256|retinoid X receptor, alpha##BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1	0.658735	CTCF.p2:13:0.659
chr12	92864644	92864824	reg1019882.p2	4.497	+	AJ845168 NM_001025232	-42811	-	AJ845165 AJ845166 NM_001025233	-47000	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-325091	-	NM_001037671 NM_001178097	231884	+	NM_001004330 AK128530	265553	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	458204	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr14	36287720	36287830	reg1032505.p1	4.497	+	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	-9380	-	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	-9628	-	AF260323 NM_032594 BC130377 BC130379 TSC_hg19_v1_chr14_+_36003369 AB037912 AK096639	-284466	+	TSC_hg19_v1_chr14_+_36295599 NM_032352 AY827074 BC006250 AK297106 AK310359 AK315424	7828	+	AB463855 CU677729 BX248287 TSC_hg19_v1_chr14_-_36789806 AF208857 BC016821 AK293473 BC005197 AB038523 AK315290 NM_001144891 NM_016586	502069	-	TSC_hg19_v1_chr14_-_36982983 BC042093 NM_001101341	695207	-	AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AF260323|INSM2|84684|insulinoma-associated 2##NM_032594|INSM2|84684|insulinoma-associated 2##BC130377|INSM2|84684|insulinoma-associated 2##BC130379|INSM2|84684|insulinoma-associated 2##AB037912|INSM2|84684|insulinoma-associated 2##AK096639|INSM2|84684|insulinoma-associated 2##NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BX248287|MBIP|51562|MAP3K12 binding inhibitory protein 1##AF208857|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC016821|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK293473|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC005197|MBIP|51562|MAP3K12 binding inhibitory protein 1##AB038523|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK315290|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_001144891|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_016586|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC042093|SFTA3|253970|surfactant associated 3##NM_001101341|SFTA3|253970|surfactant associated 3	0.0	
chr18	2907322	2907500	reg1029273.p1	4.497	+	AB026706 TSC_hg19_v1_chr18_+_2907037	-410	+	TSC_hg19_v1_chr18_+_2847006 AF270513 NM_032048 BC032231 BC136541	-60380	+	BC006008 NM_015295 TSC_hg19_v1_chr18_+_2655885	-251497	+	BC152448 D87436 NM_014646	104533	-	BC116183 BC116184 TSC_hg19_v1_chr18_-_3219875	312449	-	TSC_hg19_v1_chr18_-_3219987 AJ621424 AK125322 NM_003803 NM_019856	312634	-	AB026706|EMILIN2|84034|elastin microfibril interfacer 2##AF270513|EMILIN2|84034|elastin microfibril interfacer 2##NM_032048|EMILIN2|84034|elastin microfibril interfacer 2##BC032231|EMILIN2|84034|elastin microfibril interfacer 2##BC136541|EMILIN2|84034|elastin microfibril interfacer 2##BC006008|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##NM_015295|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##BC152448|LPIN2|9663|lipin 2##D87436|LPIN2|9663|lipin 2##NM_014646|LPIN2|9663|lipin 2##BC116183|MYOM1|8736|myomesin 1, 185kDa##BC116184|MYOM1|8736|myomesin 1, 185kDa##AJ621424|MYOM1|8736|myomesin 1, 185kDa##AK125322|MYOM1|8736|myomesin 1, 185kDa##NM_003803|MYOM1|8736|myomesin 1, 185kDa##NM_019856|MYOM1|8736|myomesin 1, 185kDa	0.0	
chr1	91430128	91430257	reg1032698.p2	4.497	+	BC126439 BC126441 AY338397 NM_020063	-247407	-	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	-969476	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-1142628	+	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	56846	-	TSC_hg19_v1_chr1_-_91487583 BC041138 AK291520	57371	-	TSC_hg19_v1_chr1_-_91487586 BC092462	57397	-	BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644##BC041138|ZNF644|84146|zinc finger protein 644##AK291520|ZNF644|84146|zinc finger protein 644##BC092462|ZNF644|84146|zinc finger protein 644	0.987765	CTCF.p2:7:0.988
chr19	5039059	5039166	reg1031080.p1	4.497	+	TSC_hg19_v1_chr19_+_5032899 CU687848	-6213	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-69939	+	NM_015015 TSC_hg19_v1_chr19_+_4969124	-69988	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	301682	-	AK098722 NM_181710 AK292251 BC017592	416314	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	583646	-	AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##NM_015015|KDM4B|23030|lysine (K)-specific demethylase 4B##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2	0.109456	
chr4	26343660	26343727	reg1034252.p2	4.497	+	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	-21011	+	TSC_hg19_v1_chr4_+_26322635 AK302230	-21057	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	-21384	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	148292	-	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	241987	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	518847	+	BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2	0.0	
chr8	28352753	28352884	reg1029545.p2	4.497	+	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	-1053	+	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	-5039	-	AK002050 AK023418 NM_018660 AB057659 AB073627	-108857	-	TSC_hg19_v1_chr8_+_28559032 AB011091	206257	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	206332	+	TSC_hg19_v1_chr8_-_28747454 BC016687 AK225072 AK304525 AK298468 NM_001172562 BC025267 AK300593 AK295977 AK001733 AK225530	394642	-	NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##AB011091|EXTL3|2137|exostoses (multiple)-like 3##AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3##BC016687|INTS9|55756|integrator complex subunit 9##AK225072|INTS9|55756|integrator complex subunit 9##AK304525|INTS9|55756|integrator complex subunit 9##AK298468|INTS9|55756|integrator complex subunit 9##NM_001172562|INTS9|55756|integrator complex subunit 9##BC025267|INTS9|55756|integrator complex subunit 9##AK300593|INTS9|55756|integrator complex subunit 9##AK295977|INTS9|55756|integrator complex subunit 9##AK001733|INTS9|55756|integrator complex subunit 9##AK225530|INTS9|55756|integrator complex subunit 9	0.0	
chr11	115944758	115944868	reg1023674.p2	4.496	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-569633	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-856165	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1395565	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	698885	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	713902	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	713925	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.0	
chr1	43123915	43124022	reg1024446.p2	4.496	+	NM_001080850	-123409	+	BC090885 BC101199 BC101200 TSC_hg19_v1_chr1_-_42966086	-157950	-	TSC_hg19_v1_chr1_+_42928956 AL832217	-195020	+	NM_006347 TSC_hg19_v1_chr1_+_43124093 AK310052 AK311979 BC003412 AK309438 AF016371 AF036331 DQ890971 DQ894146 BT019343 CR541899 CR541920	114	+	TSC_hg19_v1_chr1_+_43148064 NM_004559	24092	+	TSC_hg19_v1_chr1_+_43148096 AK309996 AK311708	24128	+	NM_001080850|CCDC30|728621|coiled-coil domain containing 30##BC101199|TMSB4XP1|7115|thymosin beta 4, X-linked pseudogene 1##BC101200|TMSB4XP1|7115|thymosin beta 4, X-linked pseudogene 1##AL832217|CCDC30|728621|coiled-coil domain containing 30##NM_006347|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AK310052|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AK311979|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##BC003412|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AK309438|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AF016371|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##AF036331|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##DQ890971|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##DQ894146|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##BT019343|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##CR541899|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##CR541920|PPIH|10465|peptidylprolyl isomerase H (cyclophilin H)##NM_004559|YBX1|4904|Y box binding protein 1##AK309996|YBX1|4904|Y box binding protein 1##AK311708|YBX1|4904|Y box binding protein 1	0.0	
chr1	8435002	8435119	reg1028269.p1	4.496	+	NM_001080397	-50671	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-348662	-	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	-348699	-	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	48957	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	442532	-	GU170215 NM_001201483	496574	-	NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##GU170215|ENO1|2023|enolase 1, (alpha)##NM_001201483|ENO1|2023|enolase 1, (alpha)	0.54116	CTCF.p2:-6:0.541
chr19	18811954	18812031	reg1032543.p2	4.496	+	AY360171 TSC_hg19_v1_chr19_+_18794489 BC028050 AB527764 CU688378 DQ893310 DQ894228 AB014516	-17469	+	TSC_hg19_v1_chr19_+_18794453 AK024089 AY040323 NM_001098482 NM_015321	-17568	+	TSC_hg19_v1_chr19_+_18747837 AK001940 AK222656 AK294074 NM_018316 BC026319	-64158	+	U75488 TSC_hg19_v1_chr19_-_18888853	76798	-	AB086984 BC033676 BC110847 L32137 BC125092 TSC_hg19_v1_chr19_-_18902115 AK074508 AK223216 AK290595 AK296586 AK297798 AK297814 NM_000095	90105	-	TSC_hg19_v1_chr19_+_18942742 NM_002911 BC039817	130753	+	AY360171|CRTC1|23373|CREB regulated transcription coactivator 1##BC028050|CRTC1|23373|CREB regulated transcription coactivator 1##DQ893310|CRTC1|23373|CREB regulated transcription coactivator 1##DQ894228|CRTC1|23373|CREB regulated transcription coactivator 1##AB014516|CRTC1|23373|CREB regulated transcription coactivator 1##AK024089|CRTC1|23373|CREB regulated transcription coactivator 1##AY040323|CRTC1|23373|CREB regulated transcription coactivator 1##NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1##NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1##AK001940|KLHL26|55295|kelch-like 26 (Drosophila)##AK222656|KLHL26|55295|kelch-like 26 (Drosophila)##AK294074|KLHL26|55295|kelch-like 26 (Drosophila)##NM_018316|KLHL26|55295|kelch-like 26 (Drosophila)##BC026319|KLHL26|55295|kelch-like 26 (Drosophila)##AB086984|COMP|1311|cartilage oligomeric matrix protein##BC033676|COMP|1311|cartilage oligomeric matrix protein##BC110847|COMP|1311|cartilage oligomeric matrix protein##L32137|COMP|1311|cartilage oligomeric matrix protein##BC125092|COMP|1311|cartilage oligomeric matrix protein##AK074508|COMP|1311|cartilage oligomeric matrix protein##AK223216|COMP|1311|cartilage oligomeric matrix protein##AK290595|COMP|1311|cartilage oligomeric matrix protein##AK296586|COMP|1311|cartilage oligomeric matrix protein##AK297798|COMP|1311|cartilage oligomeric matrix protein##AK297814|COMP|1311|cartilage oligomeric matrix protein##NM_000095|COMP|1311|cartilage oligomeric matrix protein##NM_002911|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##BC039817|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)	0.018816	
chr2	90246440	90246539	reg1027009.p1	4.496	+	TSC_hg19_v1_chr2_+_90211706 Z69013	-34771	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-168735	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-626636	-	TSC_hg19_v1_chr2_-_91847997 BC030764	1601514	-	AK097438 BC021716 NM_144705 AK296678 CU692394	5290761	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	5444993	+	BC070334|IGKC|3514|immunoglobulin kappa constant##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein	0.998223	CTCF.p2:0:0.998
chr1	201979453	201979634	reg1003034.p3	4.495	+	TSC_hg19_v1_chr1_+_201951788 BC012166 AJ242586 DQ896012 EU176398 AJ296161	-27751	+	TSC_hg19_v1_chr1_+_201951775 NM_020216 AK097372 BC001064	-27777	+	NM_006335 BC015098 TSC_hg19_v1_chr1_+_201924640 AK315602 BC009784 BC007106 BC020833 X97544 AF106622 BC000294 BC004439 BC013823	-54905	+	NM_001114309 NM_004433 TSC_hg19_v1_chr1_+_201979714 AK309265 AK312273 U97156 BC003569 U73843 U73844 AF016295	165	+	U66894 TSC_hg19_v1_chr1_+_201979752 AK225446 AF517841	241	+	AK295576 AK313044 TSC_hg19_v1_chr1_+_202092044 BC050334 NM_004767 AK222639 Y16280	112474	+	BC012166|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AJ242586|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##DQ896012|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##EU176398|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AJ296161|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##NM_020216|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##AK097372|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##BC001064|RNPEP|6051|arginyl aminopeptidase (aminopeptidase B)##NM_006335|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC015098|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##AK315602|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC009784|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC007106|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC020833|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##X97544|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##AF106622|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC000294|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC004439|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##BC013823|TIMM17A|10440|translocase of inner mitochondrial membrane 17 homolog A (yeast)##NM_001114309|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##NM_004433|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK309265|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK312273|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U97156|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##BC003569|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73843|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U73844|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF016295|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##U66894|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK225446|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AF517841|ELF3|1999|E74-like factor 3 (ets domain transcription factor, epithelial-specific )##AK295576|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK313044|GPR37L1|9283|G protein-coupled receptor 37 like 1##BC050334|GPR37L1|9283|G protein-coupled receptor 37 like 1##NM_004767|GPR37L1|9283|G protein-coupled receptor 37 like 1##AK222639|GPR37L1|9283|G protein-coupled receptor 37 like 1##Y16280|GPR37L1|9283|G protein-coupled receptor 37 like 1	0.0	
chr12	114350834	114350986	reg1001232.p2	4.495	+	AF291181 NM_022363	-441034	-	TSC_hg19_v1_chr12_+_113860217 BC009849 NM_138432 BC091479 AF134473	-490713	+	J05037 TSC_hg19_v1_chr12_-_113841693 AK292760 BC020750 NM_006843	-509236	-	CU678656 EU831458 EU831545 AB385372 AB014582 BC004289 BC006137 AL117547 TSC_hg19_v1_chr12_-_114404131 AK291444 AK314606 NM_001146698 NM_001146699 NM_016196	53194	-	NM_080718 U80987 U89353 AB527531 EU446658	490794	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	493014	-	AF291181|LHX5|64211|LIM homeobox 5##NM_022363|LHX5|64211|LIM homeobox 5##BC009849|SDSL|113675|serine dehydratase-like##NM_138432|SDSL|113675|serine dehydratase-like##BC091479|SDSL|113675|serine dehydratase-like##AF134473|SDSL|113675|serine dehydratase-like##J05037|SDS|10993|serine dehydratase##AK292760|SDS|10993|serine dehydratase##BC020750|SDS|10993|serine dehydratase##NM_006843|SDS|10993|serine dehydratase##EU831458|RBM19|9904|RNA binding motif protein 19##EU831545|RBM19|9904|RNA binding motif protein 19##AB014582|RBM19|9904|RNA binding motif protein 19##BC004289|RBM19|9904|RNA binding motif protein 19##BC006137|RBM19|9904|RNA binding motif protein 19##AL117547|RBM19|9904|RNA binding motif protein 19##AK291444|RBM19|9904|RNA binding motif protein 19##AK314606|RBM19|9904|RNA binding motif protein 19##NM_001146698|RBM19|9904|RNA binding motif protein 19##NM_001146699|RBM19|9904|RNA binding motif protein 19##NM_016196|RBM19|9904|RNA binding motif protein 19##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5	0.0	
chr17	46024379	46024495	reg1032531.p1	4.495	+	TSC_hg19_v1_chr17_+_46019041 AF468030	-5391	+	NM_018129 TSC_hg19_v1_chr17_+_46018965 AK001397 AK303665 AK303792 AK223242 AK303536 BC006525	-5493	+	NM_003110 TSC_hg19_v1_chr17_+_45973601 BC005914 BC016680 BC033814	-50857	+	BC002865 NM_024320 TSC_hg19_v1_chr17_-_46035208 AK309589	10745	-	AK223387 NM_176096 TSC_hg19_v1_chr17_+_46048452	23995	+	TSC_hg19_v1_chr17_+_46048471 AF217982 AK023722	24032	+	AF468030|PNPO|55163|pyridoxamine 5'-phosphate oxidase##NM_018129|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK001397|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK303665|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK303792|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK223242|PNPO|55163|pyridoxamine 5'-phosphate oxidase##AK303536|PNPO|55163|pyridoxamine 5'-phosphate oxidase##BC006525|PNPO|55163|pyridoxamine 5'-phosphate oxidase##NM_003110|SP2|6668|Sp2 transcription factor##BC005914|SP2|6668|Sp2 transcription factor##BC016680|SP2|6668|Sp2 transcription factor##BC033814|SP2|6668|Sp2 transcription factor##BC002865|PRR15L|79170|proline rich 15-like##NM_024320|PRR15L|79170|proline rich 15-like##AK309589|PRR15L|79170|proline rich 15-like##AK223387|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##NM_176096|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF217982|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK023722|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3	0.335498	CTCF.p2:-10:0.335
chr2	87623831	87623991	reg1030894.p1	4.495	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	-320579	-	BC107767 BC109248 BC070296 BC005379 NM_001032392 M93143 NM_002665 BC022294	-374953	-	CR749330 NM_001024457	-479174	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	131106	+	TSC_hg19_v1_chr2_+_87755060 AK312010	131149	+	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	423708	+	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC107767|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC022294|PLGLB2|5342|plasminogen-like B2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1	0.0	
chr6_qbl_hap6	4448412	4448506	reg1029972.p1	4.495	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.960769	CTCF.p2:8:0.961
chr1	161276146	161276240	reg1029381.p2	4.494	+	BC028905 NM_001102566 TSC_hg19_v1_chr1_+_161228534 BC067884 BC147003 BC147004	-47628	+	AK310773 AY572806 AY572807 AY572808 AY572809 AY572810 AY572811 AY572812 AY572813 AY572814 AY572815 AY572816 AY572817 AY572818 AY572819 AY572820 AY572821 AY572822 AY572823 AY572824 AY572825 AY572826 AY572827 BC121120 BC121121 BC030972 BC069626 BC069651 AK316208 AK303757 NM_001077469 NM_001077470 NM_001077471 NM_001077472 NM_001077473 NM_001077474 NM_001077475 NM_001077476 NM_001077477 NM_001077478 NM_001077479 NM_001077480 NM_001077481 NM_001077482 NM_005122 AK303796	-68237	-	NM_032174 TSC_hg19_v1_chr1_+_161195849 AK022832 AK027704 AK297848 BX537951 AK297831	-80336	+	BT006765 DQ895885 EU176378 S66705 D10537 BC006491 AK313555 TSC_hg19_v1_chr1_-_161279760 NM_000530	3549	-	NM_001035511 NM_001035512 NM_001035513 NM_003001 TSC_hg19_v1_chr1_+_161284170 AK131051 AK293687 AK294305 BC020808 BC066329 U57877 AB211234 AB211235 AB201252 AB212048 BC012735 BC033626 D49737	7986	+	NM_001013625	61470	-	BC028905|PCP4L1|654790|Purkinje cell protein 4 like 1##NM_001102566|PCP4L1|654790|Purkinje cell protein 4 like 1##BC067884|PCP4L1|654790|Purkinje cell protein 4 like 1##BC147003|PCP4L1|654790|Purkinje cell protein 4 like 1##BC147004|PCP4L1|654790|Purkinje cell protein 4 like 1##AK310773|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572806|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572807|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572808|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572809|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572810|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572811|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572812|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572813|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572814|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572815|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572816|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572817|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572818|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572819|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572820|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572821|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572822|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572823|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572824|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572825|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572826|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572827|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC121120|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC121121|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC030972|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC069626|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC069651|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK316208|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK303757|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077469|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077470|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077471|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077472|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077473|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077474|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077475|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077476|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077477|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077478|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077479|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077480|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077481|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077482|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_005122|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK303796|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_032174|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK022832|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK027704|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK297848|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##BX537951|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK297831|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##BT006765|MPZ|4359|myelin protein zero##DQ895885|MPZ|4359|myelin protein zero##EU176378|MPZ|4359|myelin protein zero##S66705|MPZ|4359|myelin protein zero##D10537|MPZ|4359|myelin protein zero##BC006491|MPZ|4359|myelin protein zero##AK313555|MPZ|4359|myelin protein zero##NM_000530|MPZ|4359|myelin protein zero##NM_001035511|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001035512|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001035513|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_003001|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK131051|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK293687|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK294305|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC020808|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC066329|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##U57877|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB211234|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB211235|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB201252|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB212048|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC012735|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC033626|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##D49737|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001013625|C1orf192|257177|chromosome 1 open reading frame 192	0.021146	
chr12	56114896	56114991	reg1028737.p2	4.494	+	NM_001199771 NM_002905 TSC_hg19_v1_chr12_+_56114176 AK307157 DQ426887 AK293313 BC028298 U89717 U43559	-740	+	BC130640 BC132795 TSC_hg19_v1_chr12_+_56109860 S82447 AB527695	-5059	+	BC066340 AK307141 TSC_hg19_v1_chr12_+_56109846 AK096656	-5104	+	BT007073 BT020137 BT020138 CR542096 DQ891248 DQ894433 AB529147 AF508304 TSC_hg19_v1_chr12_-_56122195	7243	-	S93788 X07982 TSC_hg19_v1_chr12_-_56122784 BC013017 M59907 M58485	7824	-	AK311893 TSC_hg19_v1_chr12_-_56122794	7850	-	NM_001199771|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##NM_002905|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##AK307157|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##DQ426887|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##AK293313|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##BC028298|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##U89717|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##U43559|RDH5|5959|retinol dehydrogenase 5 (11-cis/9-cis)##BC130640|BLOC1S1|2647|biogenesis of lysosomal organelles complex-1, subunit 1##BC132795|BLOC1S1|2647|biogenesis of lysosomal organelles complex-1, subunit 1##S82447|BLOC1S1|2647|biogenesis of lysosomal organelles complex-1, subunit 1##BC066340|BLOC1S1|2647|biogenesis of lysosomal organelles complex-1, subunit 1##AK307141|BLOC1S1-RDH5|100528022|BLOC1S1-RDH5 readthrough##AK096656|BLOC1S1-RDH5|100528022|BLOC1S1-RDH5 readthrough##BT007073|CD63|967|CD63 molecule##BT020137|CD63|967|CD63 molecule##BT020138|CD63|967|CD63 molecule##CR542096|CD63|967|CD63 molecule##DQ891248|CD63|967|CD63 molecule##DQ894433|CD63|967|CD63 molecule##AF508304|CD63|967|CD63 molecule##S93788|CD63|967|CD63 molecule##X07982|CD63|967|CD63 molecule##BC013017|CD63|967|CD63 molecule##M59907|CD63|967|CD63 molecule##M58485|CD63|967|CD63 molecule##AK311893|CD63|967|CD63 molecule	0.888237	CTCF.p2:2:0.888
chr17	43226670	43226787	reg1032614.p2	4.494	+	TSC_hg19_v1_chr17_+_43225936 BC006460	-793	+	TSC_hg19_v1_chr17_+_43225841 AK023624 AB021179	-877	+	NM_006460	-2045	+	AK056946 NM_144608	11535	+	TSC_hg19_v1_chr17_+_43299284 AY278319 NM_005892 BC111564	72632	+	AK096807 TSC_hg19_v1_chr17_-_43319268	92468	-	BC006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK023624|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AB021179|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##NM_006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK056946|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##NM_144608|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##AY278319|FMNL1|752|formin-like 1##NM_005892|FMNL1|752|formin-like 1##BC111564|FMNL1|752|formin-like 1	0.838961	CTCF.p2:-34:0.839
chr18	8882670	8882766	reg1031016.p2	4.494	+	AB384528 TSC_hg19_v1_chr18_+_8718600	-164194	+	AK131528 NM_015210	-165350	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	-272972	+	TSC_hg19_v1_chr18_+_9102620 NM_021074	219904	+	TSC_hg19_v1_chr18_+_9102715 AK312129 BC001632 BC017487 M22538 AK291865 AB590136 BC071689 DQ892593 DQ895813 CR456928	220002	+	TSC_hg19_v1_chr18_+_9136811 NM_001083625 NM_015208 BC070234 AK024808 AY373757 BC057225 AL834204	254073	+	AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165##NM_021074|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK312129|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC001632|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC017487|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##M22538|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK291865|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC071689|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ892593|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ895813|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##CR456928|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##NM_001083625|ANKRD12|23253|ankyrin repeat domain 12##NM_015208|ANKRD12|23253|ankyrin repeat domain 12##BC070234|ANKRD12|23253|ankyrin repeat domain 12##AK024808|ANKRD12|23253|ankyrin repeat domain 12##AY373757|ANKRD12|23253|ankyrin repeat domain 12##BC057225|ANKRD12|23253|ankyrin repeat domain 12##AL834204|ANKRD12|23253|ankyrin repeat domain 12	0.993768	CTCF.p2:-7:0.994
chr20	37501805	37501928	reg1027298.p1	4.494	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	-67512	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	-124754	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-148707	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	53123	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	53202	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	89123	+	AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35	0.0	
chr4	153306877	153307015	reg1029704.p2	4.494	+	NM_001013415 AY008274	-3282	-	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	-33050	-	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	-624805	-	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	149348	-	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	150487	+	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	294254	-	NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154	0.541462	CTCF.p2:-15:0.478
chrX	15867811	15867992	reg1032841.p1	4.494	+	BC113454 BC113480 NM_005089 TSC_hg19_v1_chrX_+_15808594 D49677 BC050451 BC065719 AK309673 HQ258575	-59302	+	AB021660 AK291050 NM_007220	-111500	+	BC014317 NM_020665	-184748	-	TSC_hg19_v1_chrX_-_15872876 AF251295	4975	-	TSC_hg19_v1_chrX_-_15872883 BC001117 BC071867	4985	-	TSC_hg19_v1_chrX_-_15872907 AK302908	5008	-	BC113454|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC113480|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##NM_005089|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##D49677|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC050451|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC065719|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AK309673|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##HQ258575|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AB021660|CA5B|11238|carbonic anhydrase VB, mitochondrial##AK291050|CA5B|11238|carbonic anhydrase VB, mitochondrial##NM_007220|CA5B|11238|carbonic anhydrase VB, mitochondrial##BC014317|TMEM27|57393|transmembrane protein 27##NM_020665|TMEM27|57393|transmembrane protein 27##AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	0.0	
chr11	128160274	128160355	reg1030596.p1	4.493	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1287009	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1289589	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1289654	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	231649	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	231820	-	BX640634 NM_001143820	297138	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.0	
chr11	57225094	57225227	reg1003075.p2	4.493	+	NM_017611	-30108	-	TSC_hg19_v1_chr11_-_57194592 AK075552 AK298028 AK315839 NM_199329	-30568	-	TSC_hg19_v1_chr11_-_57194589 AK311401	-30573	-	TSC_hg19_v1_chr11_+_57228149 BC113673 BC117276 BC143818 AF532858 AX751514 AY250221 DQ864979 NM_178570	3072	+	AF045584 TSC_hg19_v1_chr11_-_57282334 BC001639 NM_001198810	57176	-	TSC_hg19_v1_chr11_-_57283184 AB103033 NM_003627	58012	-	NM_017611|SLC43A3|29015|solute carrier family 43, member 3##AK075552|SLC43A3|29015|solute carrier family 43, member 3##AK298028|SLC43A3|29015|solute carrier family 43, member 3##AK315839|SLC43A3|29015|solute carrier family 43, member 3##NM_199329|SLC43A3|29015|solute carrier family 43, member 3##AK311401|SLC43A3|29015|solute carrier family 43, member 3##BC113673|RTN4RL2|349667|reticulon 4 receptor-like 2##BC117276|RTN4RL2|349667|reticulon 4 receptor-like 2##BC143818|RTN4RL2|349667|reticulon 4 receptor-like 2##AF532858|RTN4RL2|349667|reticulon 4 receptor-like 2##AX751514|RTN4RL2|349667|reticulon 4 receptor-like 2##AY250221|RTN4RL2|349667|reticulon 4 receptor-like 2##DQ864979|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_178570|RTN4RL2|349667|reticulon 4 receptor-like 2##AF045584|SLC43A1|8501|solute carrier family 43, member 1##BC001639|SLC43A1|8501|solute carrier family 43, member 1##NM_001198810|SLC43A1|8501|solute carrier family 43, member 1##AB103033|SLC43A1|8501|solute carrier family 43, member 1##NM_003627|SLC43A1|8501|solute carrier family 43, member 1	0.0	
chr12	16084575	16084734	reg1031929.p1	4.493	+	TSC_hg19_v1_chr12_+_16064282 AK024614 AK222541 AK296697	-20363	+	TSC_hg19_v1_chr12_+_16064265 BC056234	-20398	+	BC041328 NM_015954 TSC_hg19_v1_chr12_+_16064223	-20488	+	NM_001170798	345964	-	NM_145792	415421	+	TSC_hg19_v1_chr12_+_16500585 BC062473 NM_020300 AK291148 AK309707 BC005923 BC056863 NM_145791	415965	+	AK024614|DERA|51071|deoxyribose-phosphate aldolase (putative)##AK222541|DERA|51071|deoxyribose-phosphate aldolase (putative)##AK296697|DERA|51071|deoxyribose-phosphate aldolase (putative)##BC056234|DERA|51071|deoxyribose-phosphate aldolase (putative)##BC041328|DERA|51071|deoxyribose-phosphate aldolase (putative)##NM_015954|DERA|51071|deoxyribose-phosphate aldolase (putative)##NM_001170798|SLC15A5|729025|solute carrier family 15, member 5##NM_145792|MGST1|4257|microsomal glutathione S-transferase 1##NM_020300|MGST1|4257|microsomal glutathione S-transferase 1##AK291148|MGST1|4257|microsomal glutathione S-transferase 1##AK309707|MGST1|4257|microsomal glutathione S-transferase 1##BC005923|MGST1|4257|microsomal glutathione S-transferase 1##BC056863|MGST1|4257|microsomal glutathione S-transferase 1##NM_145791|MGST1|4257|microsomal glutathione S-transferase 1	0.0	
chr13	47128170	47128336	reg1026216.p1	4.493	+	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-746	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-833	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	-930	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	243062	-	AK314132 BX647777 AK302787 NM_000621 NM_001165947	342814	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1447198	-	HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.0	
chr16	10874743	10874913	reg1029162.p2	4.493	+	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-37124	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-86063	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	-200338	-	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	37720	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	96284	+	BC071683 TSC_hg19_v1_chr16_-_11036171	161338	-	AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)	0.0	
chr1	67390808	67390989	reg1029762.p1	4.493	+	AK302061 NM_001077700 NM_001077702 NM_001077703 NM_001146110 NM_001146111 NM_001146112 NM_001146113 NM_020948 TSC_hg19_v1_chr1_+_67390672 AL831987 AF515447 AF515448 AY124186 AY124187 AY124189 AY124190 AY124192 AY124193 BC066898 AK307717 BC108726 CR627441 AB590466	-239	+	TSC_hg19_v1_chr1_-_67390540 BC032406 HQ258529 AK292830 BC126379 BC126381 AK091603 BX648840 NM_024763 NM_207014	-369	-	BC101646 BC101648 AF133816 AY359030 NM_005478	-123963	-	TSC_hg19_v1_chr1_+_67395952 AF515446 AY124188 AY124191 AY124194 NM_001077701 NM_001077704 BC017423	5069	+	AB385301 BC093786 BC112031 AB044343 TSC_hg19_v1_chr1_-_67519828 D87449	128878	-	TSC_hg19_v1_chr1_-_67520070 AK289800 NM_015139	129155	-	AK302061|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077700|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077702|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077703|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001146110|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001146111|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001146112|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001146113|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_020948|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AL831987|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AF515447|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AF515448|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124186|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124187|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124189|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124190|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124192|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124193|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##BC066898|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AK307717|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##BC108726|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##CR627441|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##BC032406|WDR78|79819|WD repeat domain 78##HQ258529|WDR78|79819|WD repeat domain 78##AK292830|WDR78|79819|WD repeat domain 78##BC126379|WDR78|79819|WD repeat domain 78##BC126381|WDR78|79819|WD repeat domain 78##AK091603|WDR78|79819|WD repeat domain 78##BX648840|WDR78|79819|WD repeat domain 78##NM_024763|WDR78|79819|WD repeat domain 78##NM_207014|WDR78|79819|WD repeat domain 78##BC101646|INSL5|10022|insulin-like 5##BC101648|INSL5|10022|insulin-like 5##AF133816|INSL5|10022|insulin-like 5##AY359030|INSL5|10022|insulin-like 5##NM_005478|INSL5|10022|insulin-like 5##AF515446|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124188|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124191|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##AY124194|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077701|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##NM_001077704|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##BC017423|MIER1|57708|mesoderm induction early response 1 homolog (Xenopus laevis)##BC093786|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##BC112031|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##AB044343|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##D87449|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##AK289800|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_015139|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1	0.0	
chr1	86635468	86635552	reg1032192.p1	4.493	+	BC116180 BC113654 BC117170 BC143715 BC143717 BC143718 AY244357 NM_152890	-13397	-	TSC_hg19_v1_chr1_-_86174088 AL442074 BC026236 AK298149 NM_001170670 NM_017953	-461397	-	EU446811 AK000767 TSC_hg19_v1_chr1_-_86174035 BC110898 AK314566	-461504	-	BC091490 TSC_hg19_v1_chr1_-_86862004 AB033055 BC047368 BC009779 BC012579 AK308351 AK302792 BC026105 AK303209 NM_001007022 NM_001184765 NM_001184766 NM_020729	226465	-	NM_006536 AF043977 AK296719 AK290348 AK307937 BC041096 AB026833 AF127980	254339	+	NM_001285 TSC_hg19_v1_chr1_+_86934607 AK314375 AK291999 AK097057 AF127036	299077	+	BC116180|COL24A1|255631|collagen, type XXIV, alpha 1##BC113654|COL24A1|255631|collagen, type XXIV, alpha 1##BC117170|COL24A1|255631|collagen, type XXIV, alpha 1##BC143715|COL24A1|255631|collagen, type XXIV, alpha 1##BC143717|COL24A1|255631|collagen, type XXIV, alpha 1##BC143718|COL24A1|255631|collagen, type XXIV, alpha 1##AY244357|COL24A1|255631|collagen, type XXIV, alpha 1##NM_152890|COL24A1|255631|collagen, type XXIV, alpha 1##AL442074|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC026236|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK298149|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_001170670|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_017953|ZNHIT6|54680|zinc finger, HIT-type containing 6##EU446811|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK000767|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC110898|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK314566|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC091490|ODF2L|57489|outer dense fiber of sperm tails 2-like##AB033055|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC047368|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC009779|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC012579|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK308351|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK302792|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC026105|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK303209|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001007022|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184765|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184766|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_020729|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_006536|CLCA2|9635|chloride channel accessory 2##AF043977|CLCA2|9635|chloride channel accessory 2##AK290348|CLCA2|9635|chloride channel accessory 2##AK307937|CLCA2|9635|chloride channel accessory 2##BC041096|CLCA2|9635|chloride channel accessory 2##AB026833|CLCA2|9635|chloride channel accessory 2##AF127980|CLCA2|9635|chloride channel accessory 2##NM_001285|CLCA1|1179|chloride channel accessory 1##AK314375|CLCA1|1179|chloride channel accessory 1##AK291999|CLCA1|1179|chloride channel accessory 1##AK097057|CLCA1|1179|chloride channel accessory 1##AF127036|CLCA1|1179|chloride channel accessory 1	0.766406	CTCF.p2:-3:0.766
chr19	13145015	13145119	reg1029476.p2	4.493	+	HQ258405 TSC_hg19_v1_chr19_+_13135832 FJ861276 U07811	-9233	+	TSC_hg19_v1_chr19_+_13135745 L31881 BC117113 BC117115	-9307	+	TSC_hg19_v1_chr19_+_13135426 BX537794 AK295290	-9670	+	TSC_hg19_v1_chr19_+_13205957 BC036885	60923	+	TSC_hg19_v1_chr19_-_13213530 AK311530 M22637	68459	-	TSC_hg19_v1_chr19_-_13213673 BC002796	68630	-	HQ258405|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##FJ861276|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U07811|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC036885|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##M22637|LYL1|4066|lymphoblastic leukemia derived sequence 1##BC002796|LYL1|4066|lymphoblastic leukemia derived sequence 1	0.0	
chr3	18168821	18168930	reg1030101.p1	4.493	+	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-384708	-	D86965 NM_014744	-386477	-	AK310539 NM_001134381	-427364	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	297922	-	BC001744 NM_001131010	311358	-	AK295633 AY053503 NM_144633 AB209053 AK309034	1021129	+	NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	0.0	
chr6	28072462	28072642	reg1031837.p1	4.493	+	NM_003447	-24071	+	BC109251 BC110457 NM_012367	-147534	+	BC136881 BC136901 NM_033057	-192379	-	AK025844 AK294017 AK309837 NM_025231 TSC_hg19_v1_chr6_+_28092406 BC004255	19847	+	TSC_hg19_v1_chr6_-_28104623 AK309286 BC043177	32046	-	TSC_hg19_v1_chr6_+_28109660 AB208793 BC096282 BC096283 BC096284 BC130032 NM_006298 U57796	37139	+	NM_003447|ZNF165|7718|zinc finger protein 165##BC109251|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##BC110457|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##NM_012367|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##BC136881|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2##BC136901|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2##NM_033057|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2##AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16##NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16##BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK309286|LOC100129195|100129195|uncharacterized LOC100129195##BC043177|LOC100129195|100129195|uncharacterized LOC100129195##AB208793|ZNF192|7745|zinc finger protein 192##BC096282|ZNF192|7745|zinc finger protein 192##BC096283|ZNF192|7745|zinc finger protein 192##BC096284|ZNF192|7745|zinc finger protein 192##BC130032|ZNF192|7745|zinc finger protein 192##NM_006298|ZNF192|7745|zinc finger protein 192##U57796|ZNF192|7745|zinc finger protein 192	0.0	
chr14	89797904	89798084	reg1030546.p2	4.492	+	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-507001	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-538784	-	NM_207662 BC027607 AF474376	-737241	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	80782	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	85416	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	287601	-	AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3	0.0	
chr15	41785777	41785957	reg1027557.p2	4.492	+	TSC_hg19_v1_chr15_+_41709329 NM_015138 AK292302 D87440 BC015052 AB383821	-76507	+	AF151823 BC000780 NM_016013 AK310033 AK310983 AK309889 TSC_hg19_v1_chr15_-_41694659	-91205	-	CU680432 AF305711 TSC_hg19_v1_chr15_+_41625177	-160702	+	NM_002220 TSC_hg19_v1_chr15_+_41786071 BC026331 X54938 AB463780	223	+	BC143903 D16105 AK314006 BC045607 X60702 AK296892 NM_001135685 NM_002344 NM_206961	20171	-	AB037824 TSC_hg19_v1_chr15_-_41836456 AK290224 BC000246	50582	-	NM_015138|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK292302|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##D87440|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC015052|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF151823|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##BC000780|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##NM_016013|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK310033|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK310983|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK309889|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AF305711|NUSAP1|51203|nucleolar and spindle associated protein 1##NM_002220|ITPKA|3706|inositol-trisphosphate 3-kinase A##BC026331|ITPKA|3706|inositol-trisphosphate 3-kinase A##X54938|ITPKA|3706|inositol-trisphosphate 3-kinase A##BC143903|LTK|4058|leukocyte receptor tyrosine kinase##D16105|LTK|4058|leukocyte receptor tyrosine kinase##AK314006|LTK|4058|leukocyte receptor tyrosine kinase##BC045607|LTK|4058|leukocyte receptor tyrosine kinase##X60702|LTK|4058|leukocyte receptor tyrosine kinase##AK296892|LTK|4058|leukocyte receptor tyrosine kinase##NM_001135685|LTK|4058|leukocyte receptor tyrosine kinase##NM_002344|LTK|4058|leukocyte receptor tyrosine kinase##NM_206961|LTK|4058|leukocyte receptor tyrosine kinase##AB037824|RPAP1|26015|RNA polymerase II associated protein 1##AK290224|RPAP1|26015|RNA polymerase II associated protein 1##BC000246|RPAP1|26015|RNA polymerase II associated protein 1	0.0	
chr16	544815	544995	reg1025644.p1	4.492	+	TSC_hg19_v1_chr16_+_524843 AK303061 NM_001142272	-20056	+	TSC_hg19_v1_chr16_+_475648 BC051360 NM_014700	-69253	+	TSC_hg19_v1_chr16_+_475616 AB014565 AF395731	-69290	+	TSC_hg19_v1_chr16_+_570732 Z36827 AF038180	25852	+	TSC_hg19_v1_chr16_+_577845 BC112918 NM_005632 U85647 BC032648	32987	+	TSC_hg19_v1_chr16_+_610415 BC016613 NM_145270	65509	+	AK303061|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##NM_001142272|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##BC051360|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##NM_014700|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##AB014565|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##AF395731|RAB11FIP3|9727|RAB11 family interacting protein 3 (class II)##BC112918|SOLH|6650|small optic lobes homolog (Drosophila)##NM_005632|SOLH|6650|small optic lobes homolog (Drosophila)##U85647|SOLH|6650|small optic lobes homolog (Drosophila)##BC032648|SOLH|6650|small optic lobes homolog (Drosophila)##BC016613|C16orf11|146325|chromosome 16 open reading frame 11##NM_145270|C16orf11|146325|chromosome 16 open reading frame 11	0.0	
chr17	26811425	26811605	reg1032296.p1	4.492	+	TSC_hg19_v1_chr17_+_26800661 AK314684 NM_001145975 NM_001145976 NM_003984 U26209 BC096276 BC096277 BC096278 BC096279 AK091926 AK298388 AK303909 AK303936	-10809	+	CU678258 TSC_hg19_v1_chr17_+_26794963	-16612	+	AK295883 TSC_hg19_v1_chr17_-_26733231 BC010691 AK054669 NM_001242366 NM_080669	-78300	-	NM_003593 Y11739	39443	+	AF028788 AF028789 TSC_hg19_v1_chr17_-_26879616 AK292329 BC027176 U40998	68095	-	NM_005148 NM_054035 TSC_hg19_v1_chr17_-_26879647 AB593014	68137	-	AK314684|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145975|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145976|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_003984|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##U26209|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096276|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096277|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096278|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096279|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK091926|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK298388|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303909|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303936|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK295883|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##BC010691|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##AK054669|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##NM_001242366|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##NM_080669|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##NM_003593|FOXN1|8456|forkhead box N1##Y11739|FOXN1|8456|forkhead box N1##AF028788|UNC119|9094|unc-119 homolog (C. elegans)##AF028789|UNC119|9094|unc-119 homolog (C. elegans)##AK292329|UNC119|9094|unc-119 homolog (C. elegans)##BC027176|UNC119|9094|unc-119 homolog (C. elegans)##U40998|UNC119|9094|unc-119 homolog (C. elegans)##NM_005148|UNC119|9094|unc-119 homolog (C. elegans)##NM_054035|UNC119|9094|unc-119 homolog (C. elegans)##AB593014|UNC119|9094|unc-119 homolog (C. elegans)	0.0	
chr2	64977938	64978090	reg1021694.p1	4.492	+	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-96967	-	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-97165	-	TSC_hg19_v1_chr2_+_64751580 AL833962	-226412	+	TSC_hg19_v1_chr2_-_65090764 AK097952	112727	-	TSC_hg19_v1_chr2_-_65159574 BC037562	181563	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	237586	+	D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##AL833962|AFTPH|54812|aftiphilin##BC037562|LOC400958|400958|uncharacterized LOC400958##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.0	
chr3	5048535	5048660	reg1021823.p1	4.492	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-27243	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	-27416	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	-27481	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	115358	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	115494	+	TSC_hg19_v1_chr3_+_5229344 AK298511	180730	+	AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	0.04034	
chrX	41593952	41594044	reg1032502.p2	4.492	+	BC070180 NM_080817 AK122626 AK313702 AL832460	-10578	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	-45731	+	AJ278865 AF254868 NM_022567	-287299	+	AB208859 AB590064 HQ258518 AY705392 AF035582 BC117311 BC143454 BC143456 AF032119 NM_001126054 NM_001126055 NM_003688 AK313399	188327	-	BC044787 TSC_hg19_v1_chrX_+_43514289	1920225	+	TSC_hg19_v1_chrX_+_43515423 NM_000240 AK223499	1921416	+	BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##AJ278865|NYX|60506|nyctalopin##AF254868|NYX|60506|nyctalopin##NM_022567|NYX|60506|nyctalopin##AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC044787|MAOA|4128|monoamine oxidase A##NM_000240|MAOA|4128|monoamine oxidase A##AK223499|MAOA|4128|monoamine oxidase A	0.716252	CTCF.p2:-5:0.701
chr10	103377137	103377317	reg1030128.p1	4.491	+	TSC_hg19_v1_chr10_+_103348081 BC031695 BC001082 NM_015448 AK290154 AB527777 EU832466 EU832547 AY532267	-29157	+	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	-29218	-	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	-29298	-	AK314735 TSC_hg19_v1_chr10_-_103454693 NM_022039	77487	-	TSC_hg19_v1_chr10_-_103454921 AF281859	77735	-	AB014615 U36223 U46211 U46212 U46213 U56978 BC069106 BC128235 BC128236 NM_006119 NM_033163 NM_033164 NM_033165	158480	-	BC031695|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##BC001082|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##NM_015448|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AK290154|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832466|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##EU832547|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AY532267|DPCD|25911|deleted in primary ciliary dyskinesia homolog (mouse)##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK314735|FBXW4|6468|F-box and WD repeat domain containing 4##NM_022039|FBXW4|6468|F-box and WD repeat domain containing 4##AF281859|FBXW4|6468|F-box and WD repeat domain containing 4##AB014615|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U36223|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46211|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46212|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U46213|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##U56978|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC069106|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC128235|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##BC128236|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_006119|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033163|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033164|FGF8|2253|fibroblast growth factor 8 (androgen-induced)##NM_033165|FGF8|2253|fibroblast growth factor 8 (androgen-induced)	0.96247	CTCF.p2:-38:0.962
chr11	121338815	121338959	reg1032962.p1	4.491	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-15712	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	-15938	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	-175333	+	TSC_hg19_v1_chr11_+_121461071 AK294404	122211	+	BC130361 BC130363 AF303179 NM_001001786	647974	-	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	1187660	+	AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B	0.0	
chr11	35062269	35062450	reg1030843.p2	4.491	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-124202	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-124470	-	NM_001135024 NM_001166158 NM_003477	-124683	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	98041	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	98375	+	TSC_hg19_v1_chr11_+_35160821 M59040	98459	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr12	48848615	48848718	reg1025845.p2	4.491	+	AK298064 NM_001172682	-103642	-	AY842285 AK092740 AX747699 TSC_hg19_v1_chr12_-_48744649 BC018090 NM_001172681 NM_152320	-104051	-	AY302593 NM_181788 BC119787 BC118635	-125878	+	BC069122 NM_012404	17781	+	NM_152319	27619	+	NM_001005203	70748	+	AK298064|ZNF641|121274|zinc finger protein 641##NM_001172682|ZNF641|121274|zinc finger protein 641##AY842285|ZNF641|121274|zinc finger protein 641##AK092740|ZNF641|121274|zinc finger protein 641##BC018090|ZNF641|121274|zinc finger protein 641##NM_001172681|ZNF641|121274|zinc finger protein 641##NM_152320|ZNF641|121274|zinc finger protein 641##AY302593|H1FNT|341567|H1 histone family, member N, testis-specific##NM_181788|H1FNT|341567|H1 histone family, member N, testis-specific##BC119787|H1FNT|341567|H1 histone family, member N, testis-specific##BC118635|H1FNT|341567|H1 histone family, member N, testis-specific##BC069122|ANP32D|23519|acidic (leucine-rich) nuclear phosphoprotein 32 family, member D##NM_012404|ANP32D|23519|acidic (leucine-rich) nuclear phosphoprotein 32 family, member D##NM_152319|C12orf54|121273|chromosome 12 open reading frame 54##NM_001005203|OR8S1|341568|olfactory receptor, family 8, subfamily S, member 1	0.011239	
chr13	97681094	97681231	reg1032503.p1	4.491	+	AK122639 NM_080818 AK313684	-34550	-	AF539426 NM_153456	-938070	+	CU688350 TSC_hg19_v1_chr13_-_96705666 BC125233 BC125234 AF227906 BC017759 BC067807 BC111021 AK001735 BC032302 NM_020121	-975512	-	TSC_hg19_v1_chr13_+_97794087 CR749802	112920	+	TSC_hg19_v1_chr13_+_97874586 AK074610 NM_144778 NM_207304 AK291727 AF061261 AF491866 BC032426 BC104038 BC104039 BC104040 AK315844	193433	+	TSC_hg19_v1_chr13_+_97874708 BC020418	193552	+	AK122639|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##NM_080818|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AK313684|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##BC125233|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC125234|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF227906|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC017759|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC067807|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC111021|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AK001735|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC032302|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##NM_020121|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_144778|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_207304|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK291727|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF061261|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF491866|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC032426|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104038|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104039|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104040|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK315844|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC020418|MBNL2|10150|muscleblind-like 2 (Drosophila)	0.997739	CTCF.p2:-9:0.998
chr18	13874722	13874839	reg1032687.p1	4.491	+	BC095531 NM_005913	-49238	+	TSC_hg19_v1_chr18_+_13726671 AK296370 BC017816 BX647977 AK303842 BC005290 AK292561 AB007858 AF067791 NM_003799 AB020966 BC036798	-148090	+	TSC_hg19_v1_chr18_-_13726582 AK309506 NM_001098801 NM_152352	-148194	-	AK315319 BC094710 NM_000529 AK289381	40756	-	BC010705 AK096748 BC024227 BC037787 NM_145287	257677	-	TSC_hg19_v1_chr18_+_14179298 BC127726	304529	+	BC095531|MC5R|4161|melanocortin 5 receptor##NM_005913|MC5R|4161|melanocortin 5 receptor##AK296370|RNMT|8731|RNA (guanine-7-) methyltransferase##BC017816|RNMT|8731|RNA (guanine-7-) methyltransferase##BX647977|RNMT|8731|RNA (guanine-7-) methyltransferase##AK303842|RNMT|8731|RNA (guanine-7-) methyltransferase##BC005290|RNMT|8731|RNA (guanine-7-) methyltransferase##AK292561|RNMT|8731|RNA (guanine-7-) methyltransferase##AB007858|RNMT|8731|RNA (guanine-7-) methyltransferase##AF067791|RNMT|8731|RNA (guanine-7-) methyltransferase##NM_003799|RNMT|8731|RNA (guanine-7-) methyltransferase##AB020966|RNMT|8731|RNA (guanine-7-) methyltransferase##BC036798|RNMT|8731|RNA (guanine-7-) methyltransferase##AK309506|FAM210A|125228|family with sequence similarity 210, member A##NM_001098801|FAM210A|125228|family with sequence similarity 210, member A##NM_152352|FAM210A|125228|family with sequence similarity 210, member A##AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC010705|ZNF519|162655|zinc finger protein 519##AK096748|ZNF519|162655|zinc finger protein 519##BC024227|ZNF519|162655|zinc finger protein 519##BC037787|ZNF519|162655|zinc finger protein 519##NM_145287|ZNF519|162655|zinc finger protein 519##BC127726|ANKRD20A5P|440482|ankyrin repeat domain 20 family, member A5, pseudogene	0.927898	CTCF.p2:-29:0.928
chr18	42604864	42604991	reg1031150.p2	4.491	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-344059	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-344813	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1747498	-	NM_001242692 AK292422	188025	+	AF349446 NM_007163	589838	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	699177	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.056772	
chr4	26320699	26320879	reg1023475.p1	4.491	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-404925	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-456235	-	NM_001177999 AK314514	-662699	+	L07875 BC020780 NM_005349 NM_203283	530	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	1520	+	TSC_hg19_v1_chr4_+_26322635 AK302230	1847	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.0	
chr8	144467309	144467419	reg1029956.p1	4.491	+	TSC_hg19_v1_chr8_+_144451016 NM_052924 BC012135 BC025767 AB528055 AY082588 CU693058 AB067516	-16274	+	AF349017 NM_052963 TSC_hg19_v1_chr8_-_144417051	-50309	-	TSC_hg19_v1_chr8_-_144417034 AK303237 AK315913 AK308475 AK311647 BC071914 BC044646 BC052285	-50349	-	NM_201589	45237	-	D63484 TSC_hg19_v1_chr8_-_144623602 BC038670	156227	-	TSC_hg19_v1_chr8_-_144623640 NM_015117	156268	-	NM_052924|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC012135|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC025767|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AY082588|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AB067516|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AF349017|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_052963|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK303237|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK315913|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK308475|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK311647|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC071914|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC044646|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC052285|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_201589|MAFA|389692|v-maf musculoaponeurotic fibrosarcoma oncogene homolog A (avian)##D63484|ZC3H3|23144|zinc finger CCCH-type containing 3##BC038670|ZC3H3|23144|zinc finger CCCH-type containing 3##NM_015117|ZC3H3|23144|zinc finger CCCH-type containing 3	0.947884	CTCF.p2:-15:0.948
chr9	136454675	136454788	reg1030706.p1	4.491	+	AB528863 BC146946 BC146961 NM_001080515	-9376	-	TSC_hg19_v1_chr9_+_136399879 BC050544 NM_014694	-54806	+	AB011177 NM_001145320	-57446	+	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	46777	+	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	148747	-	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	150255	-	BC146946|FAM163B|642968|family with sequence similarity 163, member B##BC146961|FAM163B|642968|family with sequence similarity 163, member B##NM_001080515|FAM163B|642968|family with sequence similarity 163, member B##BC050544|ADAMTSL2|9719|ADAMTS-like 2##NM_014694|ADAMTSL2|9719|ADAMTS-like 2##AB011177|ADAMTSL2|9719|ADAMTS-like 2##NM_001145320|ADAMTSL2|9719|ADAMTS-like 2##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase	0.999449	CTCF.p2:2:0.999
chrX	106960217	106960319	reg1031272.p1	4.491	+	CR533450 EU831656 EU831739 TSC_hg19_v1_chrX_-_106960193 AK311834 AY007119 AK127938	-139	-	BC018148 Z50781 NM_001015881	-615	-	AK307748 AK312706 AK316467 TSC_hg19_v1_chrX_+_106871744 AK297968 BC001605 X15331 AK223169 DQ895833 EU176362 AB464022 CU674782	-88470	+	AF153603 AF228339 AB025432 AF183393 BC072446 TSC_hg19_v1_chrX_-_106960293 AL110191 NM_004089 CR933650	13	-	AK300535 TSC_hg19_v1_chrX_-_107018990 AK092669 AX747661	58671	-	TSC_hg19_v1_chrX_-_107019012 NM_198057	58740	-	CR533450|TSC22D3|1831|TSC22 domain family, member 3##EU831656|TSC22D3|1831|TSC22 domain family, member 3##EU831739|TSC22D3|1831|TSC22 domain family, member 3##AK311834|TSC22D3|1831|TSC22 domain family, member 3##AY007119|TSC22D3|1831|TSC22 domain family, member 3##AK127938|TSC22D3|1831|TSC22 domain family, member 3##BC018148|TSC22D3|1831|TSC22 domain family, member 3##Z50781|TSC22D3|1831|TSC22 domain family, member 3##NM_001015881|TSC22D3|1831|TSC22 domain family, member 3##AK307748|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK312706|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK316467|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK297968|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC001605|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##X15331|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK223169|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##DQ895833|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##EU176362|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AF153603|TSC22D3|1831|TSC22 domain family, member 3##AF228339|TSC22D3|1831|TSC22 domain family, member 3##AB025432|TSC22D3|1831|TSC22 domain family, member 3##AF183393|TSC22D3|1831|TSC22 domain family, member 3##BC072446|TSC22D3|1831|TSC22 domain family, member 3##AL110191|TSC22D3|1831|TSC22 domain family, member 3##NM_004089|TSC22D3|1831|TSC22 domain family, member 3##CR933650|TSC22D3|1831|TSC22 domain family, member 3##AK300535|TSC22D3|1831|TSC22 domain family, member 3##AK092669|TSC22D3|1831|TSC22 domain family, member 3##NM_198057|TSC22D3|1831|TSC22 domain family, member 3	0.0	
chr10	74327889	74327974	reg1015714.p2	4.490	+	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	-44212	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	-213005	-	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	-213253	-	TSC_hg19_v1_chr10_-_74385838 BC016641 AK225695 AL117423 AK225298 AK023318	57903	-	TSC_hg19_v1_chr10_-_74385854 BC004190 BC004216	57938	-	TSC_hg19_v1_chr10_-_74385887 NM_001195518 NM_006077	57986	-	AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##BC016641|MICU1|10367|mitochondrial calcium uptake 1##AK225695|MICU1|10367|mitochondrial calcium uptake 1##AL117423|MICU1|10367|mitochondrial calcium uptake 1##AK225298|MICU1|10367|mitochondrial calcium uptake 1##AK023318|MICU1|10367|mitochondrial calcium uptake 1##BC004190|MICU1|10367|mitochondrial calcium uptake 1##BC004216|MICU1|10367|mitochondrial calcium uptake 1##NM_001195518|MICU1|10367|mitochondrial calcium uptake 1##NM_006077|MICU1|10367|mitochondrial calcium uptake 1	0.0	
chr12	133029045	133029118	reg1043505.p1	4.490	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-123224	-	AF458594 NM_021808	-338509	-	TSC_hg19_v1_chr12_+_132629014 BC071958 CU687200 DQ892518 DQ895730 BC007893	-400025	+	NM_001142641	38075	+	NM_001195520	157955	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	166323	+	BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC071958|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ892518|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ895730|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC007893|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##NM_001142641|FBRSL1|57666|fibrosin-like 1##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2	0.0	
chr19	10339067	10339154	reg1005893.p1	4.490	+	TSC_hg19_v1_chr19_-_10305646 BC126227 BC144093 NM_001130823 NM_001379 AF180682 X63692	-33383	-	TSC_hg19_v1_chr19_-_10305600 BC092517	-33505	-	AB209413 TSC_hg19_v1_chr19_-_10305579	-33553	-	NM_004230 TSC_hg19_v1_chr19_-_10342058	2896	-	TSC_hg19_v1_chr19_+_10362680 NM_015956 NM_146387 NM_146388 AF132962 BC000756	23537	+	TSC_hg19_v1_chr19_+_10362889 BC009858	23788	+	BC126227|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC144093|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001130823|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001379|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##AF180682|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##X63692|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC092517|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##AB209413|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_004230|S1PR2|9294|sphingosine-1-phosphate receptor 2##NM_015956|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146387|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146388|MRPL4|51073|mitochondrial ribosomal protein L4##AF132962|MRPL4|51073|mitochondrial ribosomal protein L4##BC000756|MRPL4|51073|mitochondrial ribosomal protein L4##BC009858|MRPL4|51073|mitochondrial ribosomal protein L4	0.0	
chr19	17787910	17788061	reg1034378.p2	4.490	+	TSC_hg19_v1_chr19_+_17666507 AK075541 NM_024656	-121474	+	TSC_hg19_v1_chr19_+_17666457 BC108308	-121522	+	TSC_hg19_v1_chr19_+_17666429 AK074941	-121577	+	AB028955 NM_001080421 AB587313 TSC_hg19_v1_chr19_-_17799158	11113	-	TSC_hg19_v1_chr19_+_17830288 AK292555	42305	+	DQ387861 NM_018174 AL834233 BC067115 TSC_hg19_v1_chr19_+_17830310 BC080547 AJ440784 AK027623 BC113952 AK308975	42324	+	AK075541|GLT25D1|79709|glycosyltransferase 25 domain containing 1##NM_024656|GLT25D1|79709|glycosyltransferase 25 domain containing 1##BC108308|GLT25D1|79709|glycosyltransferase 25 domain containing 1##AK074941|GLT25D1|79709|glycosyltransferase 25 domain containing 1##AB028955|UNC13A|23025|unc-13 homolog A (C. elegans)##NM_001080421|UNC13A|23025|unc-13 homolog A (C. elegans)##AK292555|MAP1S|55201|microtubule-associated protein 1S##DQ387861|MAP1S|55201|microtubule-associated protein 1S##NM_018174|MAP1S|55201|microtubule-associated protein 1S##AL834233|MAP1S|55201|microtubule-associated protein 1S##BC067115|MAP1S|55201|microtubule-associated protein 1S##BC080547|MAP1S|55201|microtubule-associated protein 1S##AJ440784|MAP1S|55201|microtubule-associated protein 1S##AK027623|MAP1S|55201|microtubule-associated protein 1S##BC113952|MAP1S|55201|microtubule-associated protein 1S##AK308975|MAP1S|55201|microtubule-associated protein 1S	0.883365	CTCF.p2:26:0.883
chr3	10270034	10270214	reg1031531.p2	4.490	+	NM_001570 BC125184 AK299033 AK312841 TSC_hg19_v1_chr3_+_10206602 AF026273 AB587544 AJ496794	-63524	+	TSC_hg19_v1_chr3_+_10183517 AB528056	-86586	+	AK304002 TSC_hg19_v1_chr3_+_10183487	-86626	+	TSC_hg19_v1_chr3_+_10290182 NM_014760	20051	+	TSC_hg19_v1_chr3_+_10290210 D86972	20138	+	TSC_hg19_v1_chr3_+_10290370 AK289794 BC090935 BC101776 BC101770	20398	+	NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2##BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK304002|VHL|7428|von Hippel-Lindau tumor suppressor##NM_014760|TATDN2|9797|TatD DNase domain containing 2##D86972|TATDN2|9797|TatD DNase domain containing 2##AK289794|TATDN2|9797|TatD DNase domain containing 2##BC090935|TATDN2|9797|TatD DNase domain containing 2##BC101776|TATDN2|9797|TatD DNase domain containing 2##BC101770|TATDN2|9797|TatD DNase domain containing 2	0.0	
chr3	180520772	180520894	reg1031687.p1	4.490	+	AK304270 NM_181426	-123562	-	AB075860 TSC_hg19_v1_chr3_+_180320970	-199870	+	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	-200830	+	TSC_hg19_v1_chr3_+_180630246 NM_001013438 NM_001013439 NM_005087	109350	+	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	109645	+	NM_001190233 TSC_hg19_v1_chr3_-_180707525 AK311765 BC073989 BC009702 AK309019 AK307097 NM_145261	186600	-	AK304270|CCDC39|339829|coiled-coil domain containing 39##NM_181426|CCDC39|339829|coiled-coil domain containing 39##AB075860|TTC14|151613|tetratricopeptide repeat domain 14##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##NM_001013438|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013439|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_005087|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001190233|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK311765|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC073989|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC009702|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK307097|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##NM_145261|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19	0.931484	CTCF.p2:-12:0.914
chr7	36011110	36011198	reg1027202.p2	4.490	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	-170302	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	-170321	+	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	-170444	+	TSC_hg19_v1_chr7_+_36192789 NM_030636	181651	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	181729	+	TSC_hg19_v1_chr7_+_36193025 AB051493	181901	+	DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##NM_030636|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1	0.0	
chr7	44297625	44297747	reg1027464.p2	4.490	+	TSC_hg19_v1_chr7_+_44240639 BC007319 AF091079 U95735 DQ890653 DQ893833 CU675611 AB451317 AB451447 BT007078 CR456989 CR542008	-57000	+	TSC_hg19_v1_chr7_+_44240631 AK223488	-57066	+	TSC_hg19_v1_chr7_+_44240576 NM_006555 AK312622	-57108	+	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	67605	-	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	232595	-	AY437865 AY515256 FJ481111 TSC_hg19_v1_chr7_-_44580901 BC117178 BC143731 BC143756 AF192522 AF192523 NM_001101648 NM_013389	283199	-	BC007319|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AF091079|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##U95735|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ890653|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ893833|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451317|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451447|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BT007078|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR456989|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR542008|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK223488|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##NM_006555|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK312622|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3##AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	0.0	
chr8	120449813	120449928	reg1028901.p2	4.490	+	NM_002514 AK294289 AK312355 TSC_hg19_v1_chr8_+_120428685 AY082381 X96584 BC015028 CU677181 AB463923 DQ891179 DQ894361 CR457432	-21209	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	-229231	+	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	-370401	+	EU131011 DQ891628 DQ894819 D45421 L35594 AK315253 BC034961 TSC_hg19_v1_chr8_-_120651080 NM_001040092 NM_001130863 NM_006209	201192	-	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	395207	-	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	418244	-	NM_002514|NOV|4856|nephroblastoma overexpressed gene##AK294289|NOV|4856|nephroblastoma overexpressed gene##AK312355|NOV|4856|nephroblastoma overexpressed gene##AY082381|NOV|4856|nephroblastoma overexpressed gene##X96584|NOV|4856|nephroblastoma overexpressed gene##BC015028|NOV|4856|nephroblastoma overexpressed gene##DQ891179|NOV|4856|nephroblastoma overexpressed gene##DQ894361|NOV|4856|nephroblastoma overexpressed gene##CR457432|NOV|4856|nephroblastoma overexpressed gene##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##EU131011|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ891628|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ894819|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##D45421|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##L35594|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##AK315253|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC034961|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001040092|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001130863|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_006209|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)	0.0	
chr11	71828026	71828092	reg1039805.p1	4.489	+	TSC_hg19_v1_chr11_-_71823742 AK311146 AK222622 BC005156 BC005393 AF077206 NM_014042 AL080071	-4278	-	TSC_hg19_v1_chr11_-_71814398 NM_017907	-13658	-	TSC_hg19_v1_chr11_-_71814344 AK300681	-13717	-	BC030285 NM_000804 BC126398	18717	+	J05013 NM_016724 NM_016725 BC002947 AK223527 M28099	72632	+	NM_000802	72899	+	AK311146|C11orf51|25906|chromosome 11 open reading frame 51##AK222622|C11orf51|25906|chromosome 11 open reading frame 51##BC005156|C11orf51|25906|chromosome 11 open reading frame 51##BC005393|C11orf51|25906|chromosome 11 open reading frame 51##AF077206|C11orf51|25906|chromosome 11 open reading frame 51##NM_014042|C11orf51|25906|chromosome 11 open reading frame 51##AL080071|C11orf51|25906|chromosome 11 open reading frame 51##NM_017907|LAMTOR1|55004|late endosomal/lysosomal adaptor, MAPK and MTOR activator 1##AK300681|LAMTOR1|55004|late endosomal/lysosomal adaptor, MAPK and MTOR activator 1##BC030285|FOLR3|2352|folate receptor 3 (gamma)##NM_000804|FOLR3|2352|folate receptor 3 (gamma)##BC126398|FOLR3|2352|folate receptor 3 (gamma)##J05013|FOLR1|2348|folate receptor 1 (adult)##NM_016724|FOLR1|2348|folate receptor 1 (adult)##NM_016725|FOLR1|2348|folate receptor 1 (adult)##BC002947|FOLR1|2348|folate receptor 1 (adult)##AK223527|FOLR1|2348|folate receptor 1 (adult)##M28099|FOLR1|2348|folate receptor 1 (adult)##NM_000802|FOLR1|2348|folate receptor 1 (adult)	0.0	
chr16	12434389	12434553	reg1031339.p2	4.489	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-363898	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-375387	+	NM_001130007	-423953	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	463180	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	463248	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	560997	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	1.247254	CTCF.p2:-16:0.989	CTCF.p2:19:0.258
chr20	25521001	25521099	reg1031384.p1	4.489	+	TSC_hg19_v1_chr20_+_25388342 D80008 AK294593	-132700	+	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	-132728	+	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	-149524	-	TSC_hg19_v1_chr20_-_25566168 AB023197 EU718622 NM_025176 AK309298	45117	-	EU831914 EU832008 TSC_hg19_v1_chr20_-_25604651 BC022552 AK055472 AL833116 NM_152667	83568	-	BC034569 TSC_hg19_v1_chr20_+_25604757	83669	+	D80008|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##AK294593|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##AB023197|NINL|22981|ninein-like##EU718622|NINL|22981|ninein-like##NM_025176|NINL|22981|ninein-like##AK309298|NINL|22981|ninein-like##EU831914|NANP|140838|N-acetylneuraminic acid phosphatase##EU832008|NANP|140838|N-acetylneuraminic acid phosphatase##BC022552|NANP|140838|N-acetylneuraminic acid phosphatase##AK055472|NANP|140838|N-acetylneuraminic acid phosphatase##AL833116|NANP|140838|N-acetylneuraminic acid phosphatase##NM_152667|NANP|140838|N-acetylneuraminic acid phosphatase##BC034569|ZNF337|26152|zinc finger protein 337	0.950889	CTCF.p2:-3:0.951
chr6_dbb_hap3	1743619	1743726	reg1033449.p2	4.489	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.01334	
chr8	121618042	121618171	reg1029663.p1	4.489	+	TSC_hg19_v1_chr8_+_121457658 AK022122 AK300762 BC013136 NM_022045 EU176294 EU176618	-160430	+	BC021744 NM_014078	-160471	-	TSC_hg19_v1_chr8_-_121457391 AK311924	-160713	-	TSC_hg19_v1_chr8_+_121823539 AK302130	205435	+	TSC_hg19_v1_chr8_-_121823718 AF028828	205655	-	TSC_hg19_v1_chr8_-_121824090 AB590740	205957	-	AK022122|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##AK300762|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##BC013136|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##NM_022045|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##EU176294|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##EU176618|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##BC021744|MRPL13|28998|mitochondrial ribosomal protein L13##NM_014078|MRPL13|28998|mitochondrial ribosomal protein L13##AK311924|MRPL13|28998|mitochondrial ribosomal protein L13##AF028828|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)	0.955959	CTCF.p2:-3:0.956
chr14	106167365	106167510	reg1029655.p1	4.488	+	TSC_hg19_v1_chr14_-_106111114 AJ294731	-56321	-	BC040042 TSC_hg19_v1_chr14_-_106110945	-56514	-	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	-75101	-	TSC_hg19_v1_chr14_-_106174914 BC113815 AJ294729	7516	-	TSC_hg19_v1_chr14_-_106208542 AF487336	41112	-	AF150959 TSC_hg19_v1_chr14_-_106208714 S76144	41273	-	AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AJ294729|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.0	
chr15	75494354	75494497	reg1031436.p1	4.488	+	TSC_hg19_v1_chr15_+_75494242 AF495726 BC011379 AK125604	-182	+	BC110367 TSC_hg19_v1_chr15_+_75494233	-192	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	-213	+	AF263742 NM_001164404	56473	+	AF263742 NM_001145224	80753	+	NM_017828 AK225716 BC033744 AK000459 AK293708 AK057145 AK124968 AK314740 BC069195 BC068998 AL136872	133969	+	AF495726|C15orf39|56905|chromosome 15 open reading frame 39##BC011379|C15orf39|56905|chromosome 15 open reading frame 39##AK125604|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001164404|GOLGA6C|653641|golgin A6 family, member C##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001145224|GOLGA6D|653643|golgin A6 family, member D##NM_017828|COMMD4|54939|COMM domain containing 4##AK225716|COMMD4|54939|COMM domain containing 4##BC033744|COMMD4|54939|COMM domain containing 4##AK000459|COMMD4|54939|COMM domain containing 4##AK293708|COMMD4|54939|COMM domain containing 4##AK057145|COMMD4|54939|COMM domain containing 4##AK314740|COMMD4|54939|COMM domain containing 4##BC069195|COMMD4|54939|COMM domain containing 4##BC068998|COMMD4|54939|COMM domain containing 4##AL136872|COMMD4|54939|COMM domain containing 4	0.0	
chr20	12990382	12990526	reg1030854.p1	4.488	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	-813	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	-1091897	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	-1119005	+	NM_080826 TSC_hg19_v1_chr20_+_13202422	211969	+	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	629110	-	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	775087	-	BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##NM_080826|ISM1|140862|isthmin 1 homolog (zebrafish)##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)	0.0	
chr4	77870786	77870967	reg1032656.p1	4.488	+	NM_001029870 BC137241 BC137255	-51837	-	TSC_hg19_v1_chr4_+_77610738 AK304103	-260125	+	AK027744 TSC_hg19_v1_chr4_+_77610613	-260265	+	TSC_hg19_v1_chr4_+_77870905 BC008083 NM_018243	9	+	TSC_hg19_v1_chr4_+_77870908 BC064934	36	+	TSC_hg19_v1_chr4_+_77871005 AK001711 AL110300 AK302700 BC063615 GU727629 AB587498	124	+	NM_001029870|ANKRD56|345079|ankyrin repeat domain 56##BC137241|ANKRD56|345079|ankyrin repeat domain 56##BC137255|ANKRD56|345079|ankyrin repeat domain 56##AK304103|SHROOM3|57619|shroom family member 3##AK027744|SHROOM3|57619|shroom family member 3##BC008083|SEPT11|55752|septin 11##NM_018243|SEPT11|55752|septin 11##BC064934|SEPT11|55752|septin 11##AK001711|SEPT11|55752|septin 11##AL110300|SEPT11|55752|septin 11##AK302700|SEPT11|55752|septin 11##BC063615|SEPT11|55752|septin 11##GU727629|SEPT11|55752|septin 11	0.0	
chr7	126987848	126987945	reg1024634.p2	4.488	+	TSC_hg19_v1_chr7_-_126893165 AK290197	-94744	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	-95531	-	NM_000845	-104328	-	TSC_hg19_v1_chr7_-_127032759 AF218032 NM_176814 AK309674 BC047641	44862	-	AF525417 AK315472 BC078665 TSC_hg19_v1_chr7_-_127225651	237643	-	BC014100 NM_024523 TSC_hg19_v1_chr7_-_127225654	237776	-	AK290197|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AF218032|ZNF800|168850|zinc finger protein 800##NM_176814|ZNF800|168850|zinc finger protein 800##AK309674|ZNF800|168850|zinc finger protein 800##BC047641|ZNF800|168850|zinc finger protein 800##AF525417|GCC1|79571|GRIP and coiled-coil domain containing 1##AK315472|GCC1|79571|GRIP and coiled-coil domain containing 1##BC078665|GCC1|79571|GRIP and coiled-coil domain containing 1##BC014100|GCC1|79571|GRIP and coiled-coil domain containing 1##NM_024523|GCC1|79571|GRIP and coiled-coil domain containing 1	0.0	
chr7	97464806	97464969	reg1004244.p1	4.488	+	NM_003182 NM_013996 NM_013997 NM_013998 U37529 AK222957 BC018047 X54469	-103535	+	TSC_hg19_v1_chr7_+_96747012 BC022858 AF201933 BC020621	-717857	+	BC028409 NM_020186	-718983	+	AK302242 AK000379 NM_001178077 NM_133436	36563	-	BC008723 TSC_hg19_v1_chr7_-_97501721 BC014621	36817	-	TSC_hg19_v1_chr7_-_97501785 AK302189 M27396 AK316224 NM_001178075 NM_001178076 NM_001673 NM_183356	36908	-	NM_003182|TAC1|6863|tachykinin, precursor 1##NM_013996|TAC1|6863|tachykinin, precursor 1##NM_013997|TAC1|6863|tachykinin, precursor 1##NM_013998|TAC1|6863|tachykinin, precursor 1##U37529|TAC1|6863|tachykinin, precursor 1##AK222957|TAC1|6863|tachykinin, precursor 1##BC018047|TAC1|6863|tachykinin, precursor 1##X54469|TAC1|6863|tachykinin, precursor 1##BC022858|ACN9|57001|ACN9 homolog (S. cerevisiae)##AF201933|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC020621|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)##AK302242|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK000379|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178077|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_133436|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC008723|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC014621|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK302189|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##M27396|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK316224|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178075|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178076|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001673|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_183356|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)	0.0	
chr9	128991097	128991218	reg1003561.p1	4.488	+	AK309713 NM_001134778	-480680	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-481457	+	TSC_hg19_v1_chr9_-_128469506 AY524429 AY524430 AY524431 AY524432 NM_001006617 NM_001006618 NM_001006619 NM_001006620 NM_001006621 NM_024117	-521638	-	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	98010	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	385604	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	576153	+	AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##AY524429|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524430|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524431|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524432|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006617|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006618|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006619|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006620|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006621|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_024117|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43	0.0	
chr11	62788217	62788342	reg1028127.p1	4.487	+	AK307850 AK298341 AB042505 AK298351 AK313187 BC022387 NM_001184732 NM_001184733 NM_001184736 NM_004254	-4981	-	AK298374 AF057039 AF104038 AF124373 AB009698 AB009697 AK091879 BC033682 AK055764 NM_004790 NM_153276 NM_153277 NM_153278	-35847	-	BC022984 NM_000738 AJ006520 TSC_hg19_v1_chr11_-_62689135	-99206	-	BC034394 NM_001136506	123413	-	AK127610 BC101315 BC101314 AY437532 BC101316 BC101317 NM_199352	208781	-	AK298430 AB075876 NM_001039752	269121	+	AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298374|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF057039|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF104038|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AF124373|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009698|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AB009697|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK091879|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##BC033682|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##AK055764|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_004790|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153276|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153277|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##NM_153278|SLC22A6|9356|solute carrier family 22 (organic anion transporter), member 6##BC022984|CHRM1|1128|cholinergic receptor, muscarinic 1##NM_000738|CHRM1|1128|cholinergic receptor, muscarinic 1##AJ006520|CHRM1|1128|cholinergic receptor, muscarinic 1##BC034394|SLC22A24|283238|solute carrier family 22, member 24##NM_001136506|SLC22A24|283238|solute carrier family 22, member 24##AK127610|SLC22A25|387601|solute carrier family 22, member 25##BC101315|SLC22A25|387601|solute carrier family 22, member 25##BC101314|SLC22A25|387601|solute carrier family 22, member 25##AY437532|SLC22A25|387601|solute carrier family 22, member 25##BC101316|SLC22A25|387601|solute carrier family 22, member 25##BC101317|SLC22A25|387601|solute carrier family 22, member 25##NM_199352|SLC22A25|387601|solute carrier family 22, member 25##AK298430|SLC22A10|387775|solute carrier family 22, member 10##AB075876|SLC22A10|387775|solute carrier family 22, member 10##NM_001039752|SLC22A10|387775|solute carrier family 22, member 10	0.410761	CTCF.p2:11:0.411
chr15	34659594	34659704	reg1005214.p1	4.487	+	AF529233 TSC_hg19_v1_chr15_-_34659398 BC144236 AK290273 AK308910 AL832237 BC092463 NM_153613 BC048430 AY734233 AF542964	-69	-	AF482429 NM_175741 BC114518 BC114567 BC033392 AK098568	-21521	+	BC008886 TSC_hg19_v1_chr15_-_34635355 BC063023 AB043104 NM_018648	-24314	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_181077	22296	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_001023567	168517	-	BX647673 TSC_hg19_v1_chr15_-_34875067	215420	-	AF529233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC144236|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AK290273|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AK308910|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AL832237|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC092463|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##NM_153613|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##BC048430|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AY734233|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AF542964|LPCAT4|254531|lysophosphatidylcholine acyltransferase 4##AF482429|C15orf55|256646|chromosome 15 open reading frame 55##NM_175741|C15orf55|256646|chromosome 15 open reading frame 55##BC114518|C15orf55|256646|chromosome 15 open reading frame 55##BC114567|C15orf55|256646|chromosome 15 open reading frame 55##BC033392|C15orf55|256646|chromosome 15 open reading frame 55##AK098568|C15orf55|256646|chromosome 15 open reading frame 55##BC008886|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)##BC063023|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)##AB043104|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)##NM_018648|NOP10|55505|NOP10 ribonucleoprotein homolog (yeast)##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_181077|GOLGA8A|23015|golgin A8 family, member A##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_001023567|GOLGA8B|440270|golgin A8 family, member B##BX647673|GOLGA8B|440270|golgin A8 family, member B	0.0	
chr16	11422609	11422789	reg1027433.p2	4.487	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-47557	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	-52379	-	NM_021247	-55248	-	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	16595	+	TSC_hg19_v1_chr16_+_11439315 BC013040	16619	+	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	257488	-	BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2##NM_021247|PRM3|58531|protamine 3##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor	0.0	
chr17	53082981	53083128	reg1024134.p1	4.487	+	TSC_hg19_v1_chr17_+_53046125 AK122865 NM_178509 BC125116 BC041485	-36927	+	TSC_hg19_v1_chr17_-_53046016 AK293851 CR541837 DQ893136 DQ896418 AF044321 BC005895 AK295381 NM_001162861 NM_001162862 NM_004375	-37037	-	TSC_hg19_v1_chr17_+_52978217 NM_005486 AK001893 AK309164 AK225351 AJ010071 AK303912 AK300823 AK303913 AK315039 AK315907 AK223125 BC029396 AB590855	-104898	+	NM_002126 TSC_hg19_v1_chr17_+_53342320	259278	+	TSC_hg19_v1_chr17_+_53342370 BC036093 M95585	259387	+	AK290043 TSC_hg19_v1_chr17_+_53343204	260133	+	AK122865|STXBP4|252983|syntaxin binding protein 4##NM_178509|STXBP4|252983|syntaxin binding protein 4##BC125116|STXBP4|252983|syntaxin binding protein 4##BC041485|STXBP4|252983|syntaxin binding protein 4##AK293851|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##CR541837|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##DQ893136|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##DQ896418|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AF044321|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##BC005895|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AK295381|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_001162861|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_001162862|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_004375|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1##AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1##AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1##AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1##AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1##AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1##AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1##BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1##NM_002126|HLF|3131|hepatic leukemia factor##BC036093|HLF|3131|hepatic leukemia factor##M95585|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor	0.05973	
chr2	171253810	171253912	reg1014629.p2	4.487	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	-219176	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-569903	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-572476	-	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	317997	+	TSC_hg19_v1_chr2_+_171571942 AB464708	318116	+	TSC_hg19_v1_chr2_+_171572707 BC069026	318849	+	AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##BC069026|SP5|389058|Sp5 transcription factor	0.975899	
chr6	149410811	149410929	reg1028150.p1	4.487	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-342661	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-746679	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-746880	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	228233	+	AK315038 NM_015093 AK307650	228571	+	AY340238 NM_001002255 BC130305 HQ258040	310638	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chrX	40944259	40944382	reg1033122.p2	4.487	+	TSC_hg19_v1_chrX_-_40595139 AK308871	-349191	-	TSC_hg19_v1_chrX_-_40594999 AK293070	-349340	-	TSC_hg19_v1_chrX_-_40594795 AB006651 AF304448 BC098377 NM_004229	-349532	-	TSC_hg19_v1_chrX_+_40944880 NM_001039590 NM_001039591	552	+	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	248330	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	249137	+	AK308871|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14##AB006651|MED14|9282|mediator complex subunit 14##AF304448|MED14|9282|mediator complex subunit 14##BC098377|MED14|9282|mediator complex subunit 14##NM_004229|MED14|9282|mediator complex subunit 14##NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked##NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	0.0	
chrX	71004313	71004419	reg1031067.p1	4.487	+	NM_001145139 NM_001145140	-21227	+	NM_001145139 NM_001145140	-66232	-	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	-166034	-	TSC_hg19_v1_chrX_+_71130694 NM_001013627	126412	+	AB082532 BC151224 NM_001024455 TSC_hg19_v1_chrX_-_71351772	347425	-	AK126598 AY572224 NM_207422	359667	+	NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001013627|NHSL2|340527|NHS-like 2##AB082532|RGAG4|340526|retrotransposon gag domain containing 4##BC151224|RGAG4|340526|retrotransposon gag domain containing 4##NM_001024455|RGAG4|340526|retrotransposon gag domain containing 4##AK126598|FLJ44635|392490|TPT1-like protein##AY572224|FLJ44635|392490|TPT1-like protein##NM_207422|FLJ44635|392490|TPT1-like protein	0.0	
chr1	220977112	220977220	reg1032024.p2	4.486	+	NM_022746 TSC_hg19_v1_chr1_+_220960254 AK026043 AK225416 AK094105 AK290812 BC010619	-17003	+	TSC_hg19_v1_chr1_+_220921664 AL136931 BC011973 NM_017898 BC016859	-55522	+	NM_024709 TSC_hg19_v1_chr1_+_220863727 BC036067 AK091937 AK056749 AK056749 AK024208	-113464	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	75595	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	75748	+	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	75933	+	NM_022746|MARC1|64757|mitochondrial amidoxime reducing component 1##AK026043|MARC1|64757|mitochondrial amidoxime reducing component 1##AK225416|MARC1|64757|mitochondrial amidoxime reducing component 1##AK094105|MARC1|64757|mitochondrial amidoxime reducing component 1##AK290812|MARC1|64757|mitochondrial amidoxime reducing component 1##BC010619|MARC1|64757|mitochondrial amidoxime reducing component 1##AL136931|MARC2|54996|mitochondrial amidoxime reducing component 2##BC011973|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_017898|MARC2|54996|mitochondrial amidoxime reducing component 2##BC016859|MARC2|54996|mitochondrial amidoxime reducing component 2##NM_024709|C1orf115|79762|chromosome 1 open reading frame 115##BC036067|C1orf115|79762|chromosome 1 open reading frame 115##AK091937|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK056749|C1orf115|79762|chromosome 1 open reading frame 115##AK024208|C1orf115|79762|chromosome 1 open reading frame 115##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox	0.999193	CTCF.p2:1:0.999
chr15	63828552	63828732	reg1034672.p2	4.486	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	-31765	+	TSC_hg19_v1_chr15_+_63796791 AK314223	-31860	+	AK315769 NM_001218 NM_206925 TSC_hg19_v1_chr15_-_63674076	-154567	-	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	60937	+	BC017581 BC036918 AK093077 TSC_hg19_v1_chr15_-_63893135	64400	-	TSC_hg19_v1_chr15_-_64126081 U50078	297442	-	AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##AK314223|USP3|9960|ubiquitin specific peptidase 3##AK315769|CA12|771|carbonic anhydrase XII##NM_001218|CA12|771|carbonic anhydrase XII##NM_206925|CA12|771|carbonic anhydrase XII##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC017581|LOC100130855|100130855|uncharacterized LOC100130855##BC036918|LOC100130855|100130855|uncharacterized LOC100130855##AK093077|LOC100130855|100130855|uncharacterized LOC100130855##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	0.0	
chr19	5892694	5892784	reg1028164.p1	4.486	+	BC140905 NM_002034 U27329 U27330	-22191	-	TSC_hg19_v1_chr19_-_5851461 AK291852 X53578 AK313575 U27326 U27327 U27328 NM_000149 NM_001097639 NM_001097640 NM_001097641	-41258	-	BC074836 BC074837 BC108675 TSC_hg19_v1_chr19_-_5846545 AF131913	-46225	-	AJ539081 TSC_hg19_v1_chr19_-_5903795 AX775861 BC069045 AY726561 AK127692 AK291087	11021	-	TSC_hg19_v1_chr19_-_5903991 NM_001193375 NM_175614	11268	-	TSC_hg19_v1_chr19_+_5904884 NM_001017921 AK124162 BC110802	12130	+	BC140905|FUT5|2527|fucosyltransferase 5 (alpha (1,3) fucosyltransferase)##NM_002034|FUT5|2527|fucosyltransferase 5 (alpha (1,3) fucosyltransferase)##U27329|FUT5|2527|fucosyltransferase 5 (alpha (1,3) fucosyltransferase)##U27330|FUT5|2527|fucosyltransferase 5 (alpha (1,3) fucosyltransferase)##AK291852|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##X53578|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##AK313575|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##U27326|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##U27327|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##U27328|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##NM_000149|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##NM_001097639|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##NM_001097640|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##NM_001097641|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##BC074836|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##BC074837|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##BC108675|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##AF131913|FUT3|2525|fucosyltransferase 3 (galactoside 3(4)-L-fucosyltransferase, Lewis blood group)##AJ539081|NDUFA11|126328|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa##BC069045|NDUFA11|126328|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa##AY726561|NDUFA11|126328|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa##AK127692|NDUFA11|126328|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa##NM_001193375|NDUFA11|126328|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa##NM_175614|NDUFA11|126328|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 11, 14.7kDa##NM_001017921|VMAC|400673|vimentin-type intermediate filament associated coiled-coil protein##AK124162|VMAC|400673|vimentin-type intermediate filament associated coiled-coil protein##BC110802|VMAC|400673|vimentin-type intermediate filament associated coiled-coil protein	1.37539	CTCF.p2:-2:0.998	CTCF.p2:32:0.377
chr2	132302518	132302617	reg1032316.p1	4.486	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-17061	+	AK304811 TSC_hg19_v1_chr2_+_132250648 AK293811 AK300337 AK303293 AK308371 BC093080	-51982	+	TSC_hg19_v1_chr2_-_132250072 NM_001085365	-52506	-	AF038169 NM_013310	177496	+	BC043584 NM_214461	256666	-	AK122643 NM_001508	871579	+	BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK304811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK293811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK300337|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK303293|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK308371|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC093080|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39	0.943326	CTCF.p2:-7:0.943
chr6	13913299	13913389	reg1027926.p1	4.486	+	BC008234 TSC_hg19_v1_chr6_-_13814790 BC016850 NM_001031713 AK024611	-98576	-	BC052781 TSC_hg19_v1_chr6_-_13711955	-201370	-	TSC_hg19_v1_chr6_-_13711730 AB055311 NM_005493	-201609	-	NM_001165034	11332	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	11822	+	NM_001165033 AK090576 AX746519	12099	+	BC008234|CCDC90A|63933|coiled-coil domain containing 90A##BC016850|CCDC90A|63933|coiled-coil domain containing 90A##NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A##AK024611|CCDC90A|63933|coiled-coil domain containing 90A##BC052781|RANBP9|10048|RAN binding protein 9##AB055311|RANBP9|10048|RAN binding protein 9##NM_005493|RANBP9|10048|RAN binding protein 9##NM_001165034|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182##NM_001165033|RNF182|221687|ring finger protein 182##AK090576|RNF182|221687|ring finger protein 182	0.244602	CTCF.p2:1:0.245
chr6	86353895	86354030	reg1029630.p1	4.486	+	TSC_hg19_v1_chr6_-_86353055 AF037448 NM_001159677 NM_006372	-937	-	TSC_hg19_v1_chr6_-_86352716 AF155568	-1247	-	BC021932 TSC_hg19_v1_chr6_-_86352656 AK313572	-1301	-	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	34475	-	NM_000865	1293061	+	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	1450856	-	AF037448|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159677|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_006372|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AF155568|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##BC021932|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AK313572|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide	0.0	
chr1	156196122	156196303	reg1000599.p3	4.485	+	TSC_hg19_v1_chr1_+_156182797 NM_001199653 NM_001199654 NM_001199661 NM_001199662 NM_001199663 NM_001199664 NM_007221 AK124646 AK307287 AK022523 AK289490 AK290260 AK310694 BC033656 BC065031 AB464036 CU688008 DQ890582 DQ893741 EU832507 EU832588 AL080101 BC056417 AF141310 BC050735	-13418	+	TSC_hg19_v1_chr1_+_156163911 AB007915 BC039854	-32294	+	TSC_hg19_v1_chr1_+_156163907 AK074912 AK299747 AK307968 AK309678 AK309690 BC008843 AK075002 AK294524 AK293778	-32320	+	BC113432 BC113434 NM_199173 X51699 X53698 HQ258037	15772	+	AK294143 BC058509 NM_198406 AF455047 AF455045 AY424284 TSC_hg19_v1_chr1_-_156217848 AK095197 NM_024897 AK095143 AF455046 AK054682 AK094346 AK316034 AK295915 AK295916	21578	-	AY336728 AB384108 AY168922 AB085691 TSC_hg19_v1_chr1_-_156252597 AK092183 AX747396	56323	-	NM_001199653|PMF1|11243|polyamine-modulated factor 1##NM_001199654|PMF1|11243|polyamine-modulated factor 1##NM_001199661|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##NM_001199662|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##NM_001199663|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##NM_001199664|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##NM_007221|PMF1|11243|polyamine-modulated factor 1##AK124646|PMF1|11243|polyamine-modulated factor 1##AK307287|PMF1|11243|polyamine-modulated factor 1##AK022523|PMF1|11243|polyamine-modulated factor 1##AK289490|PMF1|11243|polyamine-modulated factor 1##AK290260|PMF1|11243|polyamine-modulated factor 1##AK310694|PMF1|11243|polyamine-modulated factor 1##BC033656|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##BC065031|PMF1|11243|polyamine-modulated factor 1##DQ890582|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##DQ893741|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##EU832507|PMF1|11243|polyamine-modulated factor 1##EU832588|PMF1|11243|polyamine-modulated factor 1##AL080101|PMF1|11243|polyamine-modulated factor 1##BC056417|PMF1|11243|polyamine-modulated factor 1##AF141310|PMF1|11243|polyamine-modulated factor 1##BC050735|PMF1|11243|polyamine-modulated factor 1##AB007915|SLC25A44|9673|solute carrier family 25, member 44##BC039854|SLC25A44|9673|solute carrier family 25, member 44##AK074912|SLC25A44|9673|solute carrier family 25, member 44##AK299747|SLC25A44|9673|solute carrier family 25, member 44##AK307968|SLC25A44|9673|solute carrier family 25, member 44##AK309678|SLC25A44|9673|solute carrier family 25, member 44##AK309690|SLC25A44|9673|solute carrier family 25, member 44##BC008843|SLC25A44|9673|solute carrier family 25, member 44##AK075002|SLC25A44|9673|solute carrier family 25, member 44##AK294524|SLC25A44|9673|solute carrier family 25, member 44##BC113432|BGLAP|632|bone gamma-carboxyglutamate (gla) protein##BC113434|BGLAP|632|bone gamma-carboxyglutamate (gla) protein##NM_199173|BGLAP|632|bone gamma-carboxyglutamate (gla) protein##X51699|BGLAP|632|bone gamma-carboxyglutamate (gla) protein##X53698|BGLAP|632|bone gamma-carboxyglutamate (gla) protein##HQ258037|BGLAP|632|bone gamma-carboxyglutamate (gla) protein##AK294143|PAQR6|79957|progestin and adipoQ receptor family member VI##BC058509|PAQR6|79957|progestin and adipoQ receptor family member VI##NM_198406|PAQR6|79957|progestin and adipoQ receptor family member VI##AF455047|PAQR6|79957|progestin and adipoQ receptor family member VI##AF455045|PAQR6|79957|progestin and adipoQ receptor family member VI##AY424284|PAQR6|79957|progestin and adipoQ receptor family member VI##AK095197|PAQR6|79957|progestin and adipoQ receptor family member VI##NM_024897|PAQR6|79957|progestin and adipoQ receptor family member VI##AK095143|PAQR6|79957|progestin and adipoQ receptor family member VI##AF455046|PAQR6|79957|progestin and adipoQ receptor family member VI##AK054682|PAQR6|79957|progestin and adipoQ receptor family member VI##AK094346|PAQR6|79957|progestin and adipoQ receptor family member VI##AK316034|PAQR6|79957|progestin and adipoQ receptor family member VI##AK295915|PAQR6|79957|progestin and adipoQ receptor family member VI##AK295916|PAQR6|79957|progestin and adipoQ receptor family member VI##AY336728|SMG5|23381|smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY168922|SMG5|23381|smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)##AB085691|SMG5|23381|smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK092183|SMG5|23381|smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.047045	
chr11	89350334	89350423	reg1029461.p2	4.485	+	AK057189 NM_001143837	-27600	-	AF261943 AJ704725 AJ704726 AJ704727 AJ704728 AJ704729 AY288918 CU691812 AK311389 BC040105 AK291830 AK298376 AF254621 BC034780 AB041035 NM_001143836 NM_016931 BC051371	-125806	-	NM_000372 BC027179 M74314 Y00819 U01873 J03581	-439298	+	AF261715 NM_153696	42086	+	NM_001146162	93088	+	AB037682 NM_020358	191364	-	AK057189|NOX4|50507|NADPH oxidase 4##NM_001143837|NOX4|50507|NADPH oxidase 4##AF261943|NOX4|50507|NADPH oxidase 4##AJ704725|NOX4|50507|NADPH oxidase 4##AJ704726|NOX4|50507|NADPH oxidase 4##AJ704727|NOX4|50507|NADPH oxidase 4##AJ704728|NOX4|50507|NADPH oxidase 4##AJ704729|NOX4|50507|NADPH oxidase 4##AY288918|NOX4|50507|NADPH oxidase 4##AK311389|NOX4|50507|NADPH oxidase 4##BC040105|NOX4|50507|NADPH oxidase 4##AK291830|NOX4|50507|NADPH oxidase 4##AK298376|NOX4|50507|NADPH oxidase 4##AF254621|NOX4|50507|NADPH oxidase 4##AB041035|NOX4|50507|NADPH oxidase 4##NM_001143836|NOX4|50507|NADPH oxidase 4##NM_016931|NOX4|50507|NADPH oxidase 4##BC051371|NOX4|50507|NADPH oxidase 4##NM_000372|TYR|7299|tyrosinase (oculocutaneous albinism IA)##BC027179|TYR|7299|tyrosinase (oculocutaneous albinism IA)##M74314|TYR|7299|tyrosinase (oculocutaneous albinism IA)##Y00819|TYR|7299|tyrosinase (oculocutaneous albinism IA)##U01873|TYR|7299|tyrosinase (oculocutaneous albinism IA)##J03581|TYR|7299|tyrosinase (oculocutaneous albinism IA)##AF261715|FOLH1B|219595|folate hydrolase 1B##NM_153696|FOLH1B|219595|folate hydrolase 1B##NM_001146162|TRIM77P|390231|tripartite motif containing 77, pseudogene##AB037682|TRIM49|57093|tripartite motif containing 49##NM_020358|TRIM49|57093|tripartite motif containing 49	0.891072	CTCF.p2:7:0.891
chr17	46429425	46429605	reg1015727.p2	4.485	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-244363	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-244530	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-250694	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	78023	-	TSC_hg19_v1_chr17_-_46507604 BC039040	78102	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	178756	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.0	
chr22	39410066	39410191	reg1025247.p1	4.485	+	AK024854 NM_004900 U61084 CT841510 AB527109 AB528064 AB528855 CU012951 CU012954 CU013239 CU013242 CU691044 AY743217 EU527884	-31697	+	NM_001193289 NM_145699 U03891 BC126416 BC144146 CR456393 AB528063 CU012950 CU013238 HQ258100	-56518	+	TSC_hg19_v1_chr22_-_39268255 AK094829 NM_014292	-141824	-	TSC_hg19_v1_chr22_+_39410261 AK313272 AF165520 BC011739 NM_014508 BC021080	123	+	CR456394 TSC_hg19_v1_chr22_+_39410295 AB208979 AB590057 CU012952 CU013240	198	+	NM_152426 TSC_hg19_v1_chr22_+_39417130	6999	+	AK024854|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##NM_004900|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##U61084|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CT841510|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012951|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012954|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##CU013239|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU013242|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AY743217|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##EU527884|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##NM_001193289|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##NM_145699|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##U03891|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC126416|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC144146|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CR456393|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU012950|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU013238|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##HQ258100|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##AK094829|CBX6|23466|chromobox homolog 6##NM_014292|CBX6|23466|chromobox homolog 6##AK313272|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AF165520|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC011739|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##NM_014508|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC021080|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##NM_152426|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D	0.089017	
chr12	120133019	120133160	reg1032128.p2	4.484	+	TSC_hg19_v1_chr12_+_120105769 AK312495 NM_006253 BC017671 AF022116 BC001007 BC001056 BC001823 BC018818 U83994 AK301165 Y12556 AB590811 AJ224515	-27237	+	NM_001136534 AK296289	-101789	+	BC040553 NM_178499	-360573	+	AK123136 TSC_hg19_v1_chr12_-_120241305	108208	-	TSC_hg19_v1_chr12_-_120315112 AY209000 AY257469 BC008127 AY681966 NM_001206999 NM_007174	182004	-	TSC_hg19_v1_chr12_+_120427616 AK129960 NM_207311 U88834	294509	+	AK312495|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##NM_006253|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC017671|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AF022116|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001007|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001056|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC001823|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##BC018818|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##U83994|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AK301165|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##Y12556|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##AJ224515|PRKAB1|5564|protein kinase, AMP-activated, beta 1 non-catalytic subunit##NM_001136534|TMEM233|387890|transmembrane protein 233##AK296289|TMEM233|387890|transmembrane protein 233##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60##AK123136|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY209000|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY257469|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##BC008127|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY681966|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_001206999|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_007174|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AK129960|CCDC64|92558|coiled-coil domain containing 64##NM_207311|CCDC64|92558|coiled-coil domain containing 64##U88834|CCDC64|92558|coiled-coil domain containing 64	0.974148	CTCF.p2:0:0.974
chr1	235246493	235246672	reg1004319.p1	4.484	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-350808	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-501336	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-502724	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	45507	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	45649	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	77981	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr14	64945482	64945608	reg1025837.p1	4.484	+	AK315336 NM_004857 BC057229	-13285	+	TSC_hg19_v1_chr14_+_64855070 AK095514 AK312361 BC050420 AK309266 BC009806 J04031 AB384767 DQ893634 DQ896853	-90449	+	AK302747 NM_005956	-90792	+	TSC_hg19_v1_chr14_-_64970524 NM_006977 BC035804	24898	-	TSC_hg19_v1_chr14_+_64971227 BX248777 NM_001123329 NM_014950	25713	+	TSC_hg19_v1_chr14_+_64971443 AB023214	25898	+	AK315336|AKAP5|9495|A kinase (PRKA) anchor protein 5##NM_004857|AKAP5|9495|A kinase (PRKA) anchor protein 5##BC057229|AKAP5|9495|A kinase (PRKA) anchor protein 5##AK312361|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC050420|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK309266|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC009806|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##J04031|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ893634|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ896853|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK302747|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_005956|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_006977|ZBTB25|7597|zinc finger and BTB domain containing 25##BC035804|ZBTB25|7597|zinc finger and BTB domain containing 25##BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1##AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1	0.9842	CTCF.p2:40:0.984
chr17	37027947	37028075	reg1032049.p1	4.484	+	TSC_hg19_v1_chr17_+_37026351 X82456 BC012460 DQ891539 DQ894728 AB463833 CU675705 AK289847	-1615	+	TSC_hg19_v1_chr17_+_37026313 AK295522 AK296092 AK309933 BC007560	-1697	+	AK307868 TSC_hg19_v1_chr17_+_37026294 AK294704	-1730	+	BC140879 BC140880 NM_001008777 AY700575	95628	-	EU832116 EU832210 AK312999 TSC_hg19_v1_chr17_-_37307740 AF279144 AF378753 AY704670 AY704671	279721	-	TSC_hg19_v1_chr17_-_37307863 BC036059	279836	-	X82456|LASP1|3927|LIM and SH3 protein 1##BC012460|LASP1|3927|LIM and SH3 protein 1##DQ891539|LASP1|3927|LIM and SH3 protein 1##DQ894728|LASP1|3927|LIM and SH3 protein 1##AK289847|LASP1|3927|LIM and SH3 protein 1##AK295522|LASP1|3927|LIM and SH3 protein 1##AK296092|LASP1|3927|LIM and SH3 protein 1##AK309933|LASP1|3927|LIM and SH3 protein 1##BC007560|LASP1|3927|LIM and SH3 protein 1##AK307868|LASP1|3927|LIM and SH3 protein 1##BC140879|FBXO47|494188|F-box protein 47##BC140880|FBXO47|494188|F-box protein 47##NM_001008777|FBXO47|494188|F-box protein 47##AY700575|FBXO47|494188|F-box protein 47##EU832116|PLXDC1|57125|plexin domain containing 1##EU832210|PLXDC1|57125|plexin domain containing 1##AK312999|PLXDC1|57125|plexin domain containing 1##AF279144|PLXDC1|57125|plexin domain containing 1##AF378753|PLXDC1|57125|plexin domain containing 1##AY704670|PLXDC1|57125|plexin domain containing 1##AY704671|PLXDC1|57125|plexin domain containing 1##BC036059|PLXDC1|57125|plexin domain containing 1	0.0	
chr17	45791985	45792072	reg1023616.p2	4.484	+	TSC_hg19_v1_chr17_+_45773425 AB383985	-18579	+	TSC_hg19_v1_chr17_+_45773067 BC111418	-18989	+	AB018318 BC152407 BC167150 NM_014726	-19399	+	AF093098 NM_013351 AK223634 BC039739 AF241243 AB590854 TSC_hg19_v1_chr17_+_45810959	18756	+	BC065482 TSC_hg19_v1_chr17_-_45899130	107096	-	TSC_hg19_v1_chr17_-_45899154 AF323729 AK000267 BC028010 NM_145798 AK289523 AF392446	107157	-	BC111418|TBKBP1|9755|TBK1 binding protein 1##AB018318|TBKBP1|9755|TBK1 binding protein 1##BC152407|TBKBP1|9755|TBK1 binding protein 1##BC167150|TBKBP1|9755|TBK1 binding protein 1##NM_014726|TBKBP1|9755|TBK1 binding protein 1##AF093098|TBX21|30009|T-box 21##NM_013351|TBX21|30009|T-box 21##AK223634|TBX21|30009|T-box 21##BC039739|TBX21|30009|T-box 21##AF241243|TBX21|30009|T-box 21##BC065482|OSBPL7|114881|oxysterol binding protein-like 7##AF323729|OSBPL7|114881|oxysterol binding protein-like 7##BC028010|OSBPL7|114881|oxysterol binding protein-like 7##NM_145798|OSBPL7|114881|oxysterol binding protein-like 7##AK289523|OSBPL7|114881|oxysterol binding protein-like 7##AF392446|OSBPL7|114881|oxysterol binding protein-like 7	0.0	
chr19	6863529	6863683	reg1001549.p2	4.484	+	TSC_hg19_v1_chr19_+_6772811 AB590871	-90798	+	TSC_hg19_v1_chr19_+_6772718 NM_005428 AK225710 AK313307	-90882	+	TSC_hg19_v1_chr19_-_6767447 AK225386 AK292781 AK299406 AK310659 BC006281 AF124249 AY358406 NM_005490 AK290293	-96099	-	BC059395 NM_001974 X81479 AK297003 AK131562 AK290401 AK291518 AK313495 AK297011 CU687372	23991	+	NM_001136507	166987	+	NM_001164419	176577	-	NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225386|SH2D3A|10045|SH2 domain containing 3A##AK292781|SH2D3A|10045|SH2 domain containing 3A##AK299406|SH2D3A|10045|SH2 domain containing 3A##AK310659|SH2D3A|10045|SH2 domain containing 3A##BC006281|SH2D3A|10045|SH2 domain containing 3A##AF124249|SH2D3A|10045|SH2 domain containing 3A##AY358406|SH2D3A|10045|SH2 domain containing 3A##NM_005490|SH2D3A|10045|SH2 domain containing 3A##AK290293|SH2D3A|10045|SH2 domain containing 3A##BC059395|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_001974|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##X81479|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297003|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK131562|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK290401|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK291518|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK313495|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##AK297011|EMR1|2015|egf-like module containing, mucin-like, hormone receptor-like 1##NM_001136507|MBD3L5|284428|methyl-CpG binding domain protein 3-like 5##NM_001164419|MBD3L4|653656|methyl-CpG binding domain protein 3-like 4	0.0	
chr15	101459053	101459195	reg1000524.p3	4.483	+	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-39053	+	TSC_hg19_v1_chr15_+_101420006 NM_000693	-39118	+	TSC_hg19_v1_chr15_+_101390032 AK056534	-69091	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	350	-	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	388	+	AB071402 TSC_hg19_v1_chr15_-_101791795	332612	-	AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##NM_000693|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK056534|LOC145757|145757|uncharacterized LOC145757##NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AB071402|CHSY1|22856|chondroitin sulfate synthase 1	0.0	
chr1	57045385	57045496	reg1023092.p2	4.483	+	TSC_hg19_v1_chr1_-_57045237 NM_003713	-195	-	AK312439 TSC_hg19_v1_chr1_-_57045216	-223	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	-310	-	TSC_hg19_v1_chr1_+_57110986 AK314011 NM_006252 U06454 BC069680 BC069740 BC069823 EF056019	65462	+	AK125198 NM_001004303 TSC_hg19_v1_chr1_-_57285379	239933	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	275068	+	NM_003713|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK314011|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_006252|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##U06454|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069680|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069740|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069823|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##EF056019|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##AK125198|C1orf168|199920|chromosome 1 open reading frame 168##NM_001004303|C1orf168|199920|chromosome 1 open reading frame 168##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide	0.0	
chr16	85148950	85149095	reg1002449.p2	4.483	+	BC093665 BC111944 AK126284 NM_198491	-2968	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-87652	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-103893	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	495999	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	497931	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	573520	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.10427	
chr3	135969156	135969315	reg1028618.p2	4.483	+	S67325 TSC_hg19_v1_chr3_+_135969193 BC013768 AB209009 BC053661 AK295312 AK130359 AK225733 AK303079 AK225215 AL831978 CU680676	-33	+	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	-71	+	TSC_hg19_v1_chr3_-_135914658 AK091956 NM_018133	-54554	-	TSC_hg19_v1_chr3_-_136471221 BC040708 AB210023 AK309934 BC064699 CR749247 NM_005862	501980	-	BC050423 NM_001097599 NM_001097600 NM_025246 TSC_hg19_v1_chr3_+_136537897 BC022557 AK314079 BC000111 AL136661	568684	+	TSC_hg19_v1_chr3_+_136581071 NM_006153 BC006403	611805	+	S67325|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC013768|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AB209009|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC053661|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK295312|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK130359|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225733|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK303079|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225215|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AL831978|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK091956|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_018133|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##BC040708|STAG1|10274|stromal antigen 1##AB210023|STAG1|10274|stromal antigen 1##AK309934|STAG1|10274|stromal antigen 1##BC064699|STAG1|10274|stromal antigen 1##CR749247|STAG1|10274|stromal antigen 1##NM_005862|STAG1|10274|stromal antigen 1##BC050423|TMEM22|80723|transmembrane protein 22##NM_001097599|TMEM22|80723|transmembrane protein 22##NM_001097600|TMEM22|80723|transmembrane protein 22##NM_025246|TMEM22|80723|transmembrane protein 22##BC022557|TMEM22|80723|transmembrane protein 22##AK314079|TMEM22|80723|transmembrane protein 22##BC000111|TMEM22|80723|transmembrane protein 22##AL136661|TMEM22|80723|transmembrane protein 22##NM_006153|NCK1|4690|NCK adaptor protein 1##BC006403|NCK1|4690|NCK adaptor protein 1	0.0	
chr4	150819075	150819167	reg1031518.p1	4.483	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-1455537	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-1455782	-	TSC_hg19_v1_chr4_-_149357955 AB587357	-1461139	-	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	180404	+	NM_006439	683955	+	TSC_hg19_v1_chr4_-_151770612 AB208838	951528	-	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.543729	CTCF.p2:27:0.544
chr4	41753849	41754000	reg1029927.p2	4.483	+	TSC_hg19_v1_chr4_-_41750938 D82344 NM_003924	-2963	-	BC017199 TSC_hg19_v1_chr4_-_41750743 AK311082	-3192	-	TSC_hg19_v1_chr4_+_41700736 AL117572	-53148	+	BC025350 TSC_hg19_v1_chr4_-_41884589	130655	-	TSC_hg19_v1_chr4_+_41937165 NM_018126 AK023062 AK001387 AK094190 AK308501 AY659966	183286	+	TSC_hg19_v1_chr4_+_41937386 BC000948 CU674470 CR457260	183510	+	D82344|PHOX2B|8929|paired-like homeobox 2b##NM_003924|PHOX2B|8929|paired-like homeobox 2b##BC017199|PHOX2B|8929|paired-like homeobox 2b##AL117572|LIMCH1|22998|LIM and calponin homology domains 1##NM_018126|TMEM33|55161|transmembrane protein 33##AK023062|TMEM33|55161|transmembrane protein 33##AK001387|TMEM33|55161|transmembrane protein 33##AK094190|TMEM33|55161|transmembrane protein 33##AK308501|TMEM33|55161|transmembrane protein 33##AY659966|TMEM33|55161|transmembrane protein 33##BC000948|TMEM33|55161|transmembrane protein 33##CR457260|TMEM33|55161|transmembrane protein 33	0.925122	CTCF.p2:-75:0.525	CTCF.p2:-92:0.400
chr15	90577550	90577730	reg1027703.p1	4.482	+	TSC_hg19_v1_chr15_+_90544707 BC020301 AK094712 NM_198526	-32951	+	AK093274 AX748027 CU691000 TSC_hg19_v1_chr15_-_90456145 AK000495 BC053602 NM_001199058 NM_182616	-121535	-	NM_005829	-140024	-	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	68022	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	68065	-	TSC_hg19_v1_chr15_-_90645713 AK312627	68087	-	BC020301|ZNF710|374655|zinc finger protein 710##AK094712|ZNF710|374655|zinc finger protein 710##NM_198526|ZNF710|374655|zinc finger protein 710##AK093274|C15orf38|348110|chromosome 15 open reading frame 38##AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##BC053602|C15orf38|348110|chromosome 15 open reading frame 38##NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##NM_182616|C15orf38|348110|chromosome 15 open reading frame 38##NM_005829|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial	0.0	
chr16	3284914	3285095	reg1033028.p1	4.482	+	BC069335 NM_012360 Y14442	-30758	+	CU675598 TSC_hg19_v1_chr16_-_3191371	-93645	-	TSC_hg19_v1_chr16_+_3185119 NM_001134655 BC007287 BC116445 AK291789 AK055337 AK289834	-99845	+	AK315036 BC032575 AF060866 TSC_hg19_v1_chr16_-_3285159 BC025293 BC012909 AK056010 NM_001145447 NM_003454	124	-	Y14443 BC054005 NM_001145448 NM_198088 NM_001145446 NM_198087	403	-	FJ785717 FJ785718 FJ785719 FJ785720 FJ785721 FJ785722 AB527834 BC101511 BC101537 Y14441 AK298660 AF018080 NM_000243 NM_001198536	21602	-	BC069335|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##NM_012360|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##Y14442|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##NM_001134655|ZNF213|7760|zinc finger protein 213##BC007287|ZNF213|7760|zinc finger protein 213##AK291789|ZNF213|7760|zinc finger protein 213##AK055337|ZNF213|7760|zinc finger protein 213##AK289834|ZNF213|7760|zinc finger protein 213##AK315036|ZNF200|7752|zinc finger protein 200##BC032575|ZNF200|7752|zinc finger protein 200##AF060866|ZNF200|7752|zinc finger protein 200##BC025293|ZNF200|7752|zinc finger protein 200##BC012909|ZNF200|7752|zinc finger protein 200##AK056010|ZNF200|7752|zinc finger protein 200##NM_001145447|ZNF200|7752|zinc finger protein 200##NM_003454|ZNF200|7752|zinc finger protein 200##Y14443|ZNF200|7752|zinc finger protein 200##BC054005|ZNF200|7752|zinc finger protein 200##NM_001145448|ZNF200|7752|zinc finger protein 200##NM_198088|ZNF200|7752|zinc finger protein 200##NM_001145446|ZNF200|7752|zinc finger protein 200##NM_198087|ZNF200|7752|zinc finger protein 200##FJ785717|MEFV|4210|Mediterranean fever##FJ785718|MEFV|4210|Mediterranean fever##FJ785719|MEFV|4210|Mediterranean fever##FJ785720|MEFV|4210|Mediterranean fever##FJ785721|MEFV|4210|Mediterranean fever##FJ785722|MEFV|4210|Mediterranean fever##BC101511|MEFV|4210|Mediterranean fever##BC101537|MEFV|4210|Mediterranean fever##Y14441|MEFV|4210|Mediterranean fever##AK298660|MEFV|4210|Mediterranean fever##AF018080|MEFV|4210|Mediterranean fever##NM_000243|MEFV|4210|Mediterranean fever##NM_001198536|MEFV|4210|Mediterranean fever	0.0	
chr19	2062233	2062362	reg1032565.p1	4.482	+	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-11064	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-16056	-	TSC_hg19_v1_chr19_-_2042036 AK001730	-20247	-	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	22946	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	33968	-	TSC_hg19_v1_chr19_-_2096297 AL832474	33997	-	BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK001730|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A	0.0	
chr2	80483710	80483818	reg1030916.p1	4.482	+	TSC_hg19_v1_chr2_+_79740175 AK295181	-743549	+	NM_001164883 NM_004389 BC052996 TSC_hg19_v1_chr2_+_79740147 BC040458	-743656	+	AK291973 AK311523 AK311523 AK311526 NM_138938 NM_002580 NM_138937	-1096886	-	AB587576 AY182024 HQ257885 TSC_hg19_v1_chr2_-_80530981	47199	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	47761	-	TSC_hg19_v1_chr2_-_80531719 AK290512	47961	-	AK295181|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_001164883|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_004389|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC052996|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC040458|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##AK291973|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311526|REG3A|5068|regenerating islet-derived 3 alpha##NM_138938|REG3A|5068|regenerating islet-derived 3 alpha##NM_002580|REG3A|5068|regenerating islet-derived 3 alpha##NM_138937|REG3A|5068|regenerating islet-derived 3 alpha##AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##HQ257885|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	0.0	
chr3	112233563	112233722	reg1028994.p2	4.482	+	AK292692 NM_001085357 NM_181780	-15247	-	AL832529 AK129797 AK293399 BC031103 TSC_hg19_v1_chr3_+_112052024 AK074972	-181618	+	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	-181684	+	AK307432 AB079384 CU692886 DQ893424 DQ896774 AF202092 TSC_hg19_v1_chr3_-_112280499 BC024221 NM_022488 AL137515	46800	-	TSC_hg19_v1_chr3_-_112280761 BC002830	47119	-	TSC_hg19_v1_chr3_-_112280783 AK308919	47140	-	AK292692|BTLA|151888|B and T lymphocyte associated##NM_001085357|BTLA|151888|B and T lymphocyte associated##NM_181780|BTLA|151888|B and T lymphocyte associated##AL832529|CD200|4345|CD200 molecule##AK129797|CD200|4345|CD200 molecule##AK293399|CD200|4345|CD200 molecule##BC031103|CD200|4345|CD200 molecule##AK074972|CD200|4345|CD200 molecule##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule##AK307432|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AB079384|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##DQ893424|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##DQ896774|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AF202092|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##BC024221|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##NM_022488|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AL137515|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##BC002830|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AK308919|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)	0.0	
chr5	134120372	134120482	reg1025204.p1	4.482	+	NM_014829 TSC_hg19_v1_chr5_+_134094470 AK126011 AK291788 BC105598 AF106680 AB018344 BC012304 CU680282	-25884	+	TSC_hg19_v1_chr5_+_134074237 NM_001745 BC130325 AK313156 BC063532 U18242 AB590695 HQ258172 AF068179	-46117	+	TSC_hg19_v1_chr5_+_133984493 AK304060 NM_001252231 NM_021982 BC019341	-135996	+	BC053677 NM_152409	60942	+	TSC_hg19_v1_chr5_+_134181685 NM_001135586 AK094881	61199	+	TSC_hg19_v1_chr5_+_134181739 BX648529 AJ437658	61330	+	NM_014829|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AK126011|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AK291788|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##BC105598|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AF106680|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AB018344|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##BC012304|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##NM_001745|CAMLG|819|calcium modulating ligand##BC130325|CAMLG|819|calcium modulating ligand##AK313156|CAMLG|819|calcium modulating ligand##BC063532|CAMLG|819|calcium modulating ligand##U18242|CAMLG|819|calcium modulating ligand##HQ258172|CAMLG|819|calcium modulating ligand##AF068179|CAMLG|819|calcium modulating ligand##AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001252231|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC053677|C5orf24|134553|chromosome 5 open reading frame 24##NM_152409|C5orf24|134553|chromosome 5 open reading frame 24##NM_001135586|C5orf24|134553|chromosome 5 open reading frame 24##AK094881|C5orf24|134553|chromosome 5 open reading frame 24##BX648529|C5orf24|134553|chromosome 5 open reading frame 24##AJ437658|C5orf24|134553|chromosome 5 open reading frame 24	0.625843	CTCF.p2:-35:0.626
chr8	146052432	146052526	reg1023107.p2	4.482	+	TSC_hg19_v1_chr8_+_146024301 AK131440 NM_213605 AK096527 AK097278	-28157	+	AK289459 TSC_hg19_v1_chr8_-_146017781 BC093064 NM_000973 AK309619	-34686	-	AK301073 D28421 TSC_hg19_v1_chr8_-_146017776	-34703	-	AK127225 TSC_hg19_v1_chr8_-_146052601	65	-	NM_003416 TSC_hg19_v1_chr8_+_146052963 AK096025 AK301561 AK308002 BX647998 BC058923 AK313745 AK300001 M29580	478	+	TSC_hg19_v1_chr8_-_146078415 BC003055 AK023070 BC065729	25907	-	AK131440|ZNF517|340385|zinc finger protein 517##NM_213605|ZNF517|340385|zinc finger protein 517##AK096527|ZNF517|340385|zinc finger protein 517##AK097278|ZNF517|340385|zinc finger protein 517##AK289459|RPL8|6132|ribosomal protein L8##BC093064|RPL8|6132|ribosomal protein L8##NM_000973|RPL8|6132|ribosomal protein L8##AK309619|RPL8|6132|ribosomal protein L8##AK301073|RPL8|6132|ribosomal protein L8##AK127225|LOC100130027|100130027|uncharacterized LOC100130027##NM_003416|ZNF7|7553|zinc finger protein 7##AK096025|ZNF7|7553|zinc finger protein 7##AK301561|ZNF7|7553|zinc finger protein 7##AK308002|ZNF7|7553|zinc finger protein 7##BX647998|ZNF7|7553|zinc finger protein 7##BC058923|ZNF7|7553|zinc finger protein 7##AK313745|ZNF7|7553|zinc finger protein 7##AK300001|ZNF7|7553|zinc finger protein 7##M29580|ZNF7|7553|zinc finger protein 7##BC003055|COMMD5|28991|COMM domain containing 5##AK023070|COMMD5|28991|COMM domain containing 5##BC065729|COMMD5|28991|COMM domain containing 5	0.0	
chr8	86132805	86132900	reg1003185.p1	4.482	+	TSC_hg19_v1_chr8_+_86132857 AK093753	-61	+	BC032347 TSC_hg19_v1_chr8_-_86132612 BC146983 BC146988 BC157825 BC171873 AK000414 BC055092 BC062221 NM_001099670 NM_001099671 NM_001099672 NM_001099673	-248	-	NM_001083589	-32943	+	TSC_hg19_v1_chr8_+_86157708 NM_198584	24855	+	TSC_hg19_v1_chr8_+_86157743 BC052602	24891	+	TSC_hg19_v1_chr8_+_86158005 AK095314	25153	+	BC032347|C8orf59|401466|chromosome 8 open reading frame 59##BC146983|C8orf59|401466|chromosome 8 open reading frame 59##BC146988|C8orf59|401466|chromosome 8 open reading frame 59##BC157825|C8orf59|401466|chromosome 8 open reading frame 59##BC171873|C8orf59|401466|chromosome 8 open reading frame 59##BC055092|C8orf59|401466|chromosome 8 open reading frame 59##BC062221|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099670|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099671|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099672|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099673|C8orf59|401466|chromosome 8 open reading frame 59##NM_001083589|E2F5|1875|E2F transcription factor 5, p130-binding##NM_198584|CA13|377677|carbonic anhydrase XIII##BC052602|CA13|377677|carbonic anhydrase XIII##AK095314|CA13|377677|carbonic anhydrase XIII	0.0	
chrX	18692999	18693099	reg1033016.p2	4.482	+	AB464151 AF014459 DQ426892 NM_000330	-2845	-	BC036091 NM_001037343	-232706	+	BC010966 TSC_hg19_v1_chrX_+_18443727 NM_003159 AK307444 AY217744 Y15057	-249320	+	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	15995	+	TSC_hg19_v1_chrX_-_19002476 NM_000292	309413	-	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	447618	-	AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1##BC036091|CDKL5|6792|cyclin-dependent kinase-like 5##NM_001037343|CDKL5|6792|cyclin-dependent kinase-like 5##BC010966|CDKL5|6792|cyclin-dependent kinase-like 5##NM_003159|CDKL5|6792|cyclin-dependent kinase-like 5##AK307444|CDKL5|6792|cyclin-dependent kinase-like 5##AY217744|CDKL5|6792|cyclin-dependent kinase-like 5##Y15057|CDKL5|6792|cyclin-dependent kinase-like 5##NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64	0.0	
chr12	4688997	4689114	reg1028260.p1	4.481	+	NM_001130862 NM_006479 TSC_hg19_v1_chr12_+_4648072 AK316367 AF006259 AK290428 AK291948 AK300773 BC006992 BC005973 BC016330 AK096930 AL832243 CU677609	-41029	+	TSC_hg19_v1_chr12_-_4647672 AK074479 BX641128	-41387	-	AL834377 NM_020374 TSC_hg19_v1_chr12_-_4647648	-41409	-	AK292322 BC031244 NM_003845 GU139746 AK311576	10199	+	AF087003 U85715 BC047535 AF093408 NM_006422	65253	-	TSC_hg19_v1_chr12_-_4758185 AK292451	69141	-	NM_001130862|RAD51AP1|10635|RAD51 associated protein 1##NM_006479|RAD51AP1|10635|RAD51 associated protein 1##AK316367|RAD51AP1|10635|RAD51 associated protein 1##AF006259|RAD51AP1|10635|RAD51 associated protein 1##AK290428|RAD51AP1|10635|RAD51 associated protein 1##AK291948|RAD51AP1|10635|RAD51 associated protein 1##AK300773|RAD51AP1|10635|RAD51 associated protein 1##BC006992|RAD51AP1|10635|RAD51 associated protein 1##BC005973|RAD51AP1|10635|RAD51 associated protein 1##BC016330|RAD51AP1|10635|RAD51 associated protein 1##AK096930|RAD51AP1|10635|RAD51 associated protein 1##AL832243|RAD51AP1|10635|RAD51 associated protein 1##AK074479|C12orf4|57102|chromosome 12 open reading frame 4##BX641128|C12orf4|57102|chromosome 12 open reading frame 4##AL834377|C12orf4|57102|chromosome 12 open reading frame 4##NM_020374|C12orf4|57102|chromosome 12 open reading frame 4##AK292322|DYRK4|8798|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4##BC031244|DYRK4|8798|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4##NM_003845|DYRK4|8798|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4##AF087003|AKAP3|10566|A kinase (PRKA) anchor protein 3##U85715|AKAP3|10566|A kinase (PRKA) anchor protein 3##BC047535|AKAP3|10566|A kinase (PRKA) anchor protein 3##AF093408|AKAP3|10566|A kinase (PRKA) anchor protein 3##NM_006422|AKAP3|10566|A kinase (PRKA) anchor protein 3##AK292451|AKAP3|10566|A kinase (PRKA) anchor protein 3	0.457072	CTCF.p2:18:0.457
chr1	38968518	38968617	reg1009506.p1	4.481	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-456118	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-490137	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-490182	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	356819	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	370449	-	AK312811 BC051675 AK123051 NM_030772	378710	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.0	
chr15	31195908	31196088	reg1028093.p2	4.481	+	BC105788 NM_001039841	-277120	+	TSC_hg19_v1_chr15_+_30918372 BC071990	-277612	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-510286	-	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	76	+	CR936734 CR936727 TSC_hg19_v1_chr15_+_31196114 AB023235	119	+	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	87769	-	BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936734|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936727|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AB023235|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10	0.0	
chr7	66594301	66594481	reg1028254.p2	4.481	+	TSC_hg19_v1_chr7_+_66461858 BC042156 NM_018264 AK001762 BC015591 BC051888	-132533	+	CU688080 TSC_hg19_v1_chr7_-_66460574 BC065700 AF151855 AK001779 AY169963 NM_016038 AK289609	-133891	-	TSC_hg19_v1_chr7_+_66386238 BC010519	-208120	+	TSC_hg19_v1_chr7_-_66767458 BC029419 D38438 D38500 BC029368 BC038841 BC056507	173037	-	TSC_hg19_v1_chr7_+_66767639 AK023257 AK308931	173217	+	TSC_hg19_v1_chr7_+_66767642 AK307290	173257	+	BC042156|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##NM_018264|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##AK001762|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##BC015591|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##BC051888|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##BC065700|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AF151855|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AK001779|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AY169963|SBDS|51119|Shwachman-Bodian-Diamond syndrome##NM_016038|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AK289609|SBDS|51119|Shwachman-Bodian-Diamond syndrome##BC010519|C7orf42|55069|chromosome 7 open reading frame 42##BC029419|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##D38438|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##D38500|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##BC029368|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##BC038841|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##AK023257|STAG3L4|64940|stromal antigen 3-like 4##AK308931|STAG3L4|64940|stromal antigen 3-like 4##AK307290|STAG3L4|64940|stromal antigen 3-like 4	0.0	
chr1	176088850	176088954	reg1028957.p1	4.480	+	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	-376192	-	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-926872	-	AK127044 NM_022093	-1051909	+	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	87263	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	87416	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	87467	-	AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2	0.989233	CTCF.p2:-4:0.989
chr12	25205453	25205566	reg1029876.p1	4.480	+	NM_001204126 NM_001204127 NM_006152	-329	+	BC035880 NM_001101339 BC046192 BC062789	-55097	-	TSC_hg19_v1_chr12_-_25102303 AK056255 NM_001178091 NM_001178092 NM_005504	-103173	-	TSC_hg19_v1_chr12_+_25205520 BC029391 AK303103 AK303256 BC126417 BC144164 BC144165 BC144170	71	+	BC028415 AK297998 AK302235 AK301763 AK093102 AX747924 BC031047 BC047415 BC057795 NM_001082972 NM_001082973 NM_001204101 NM_001204102 NM_018272 AK304602	142554	-	TSC_hg19_v1_chr12_+_25348156 AK057730 NM_001001660	142642	+	NM_001204126|LRMP|4033|lymphoid-restricted membrane protein##NM_001204127|LRMP|4033|lymphoid-restricted membrane protein##NM_006152|LRMP|4033|lymphoid-restricted membrane protein##BC035880|C12orf77|196415|chromosome 12 open reading frame 77##NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77##BC046192|C12orf77|196415|chromosome 12 open reading frame 77##BC062789|C12orf77|196415|chromosome 12 open reading frame 77##AK056255|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178091|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178092|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_005504|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BC029391|LRMP|4033|lymphoid-restricted membrane protein##AK303103|LRMP|4033|lymphoid-restricted membrane protein##AK303256|LRMP|4033|lymphoid-restricted membrane protein##BC126417|LRMP|4033|lymphoid-restricted membrane protein##BC144164|LRMP|4033|lymphoid-restricted membrane protein##BC144165|LRMP|4033|lymphoid-restricted membrane protein##BC144170|LRMP|4033|lymphoid-restricted membrane protein##BC028415|CASC1|55259|cancer susceptibility candidate 1##AK297998|CASC1|55259|cancer susceptibility candidate 1##AK302235|CASC1|55259|cancer susceptibility candidate 1##AK301763|CASC1|55259|cancer susceptibility candidate 1##AK093102|CASC1|55259|cancer susceptibility candidate 1##BC031047|CASC1|55259|cancer susceptibility candidate 1##BC047415|CASC1|55259|cancer susceptibility candidate 1##BC057795|CASC1|55259|cancer susceptibility candidate 1##NM_001082972|CASC1|55259|cancer susceptibility candidate 1##NM_001082973|CASC1|55259|cancer susceptibility candidate 1##NM_001204101|CASC1|55259|cancer susceptibility candidate 1##NM_001204102|CASC1|55259|cancer susceptibility candidate 1##NM_018272|CASC1|55259|cancer susceptibility candidate 1##AK304602|CASC1|55259|cancer susceptibility candidate 1##AK057730|LYRM5|144363|LYR motif containing 5##NM_001001660|LYRM5|144363|LYR motif containing 5	0.0	
chr14	77591173	77591353	reg1025865.p2	4.480	+	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	-26618	+	AK124327 TSC_hg19_v1_chr14_-_77542533	-48730	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-96203	-	BC117676 TSC_hg19_v1_chr14_-_77608072	16752	-	AK294840 TSC_hg19_v1_chr14_-_77608135 AK095612 NM_174976	16872	-	TSC_hg19_v1_chr14_+_77648082 NM_020431	56829	+	NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK294840|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK095612|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_174976|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_020431|TMEM63C|57156|transmembrane protein 63C	0.0	
chr2	107456448	107456547	reg1031422.p1	4.480	+	NM_001144013	-371697	-	TSC_hg19_v1_chr2_-_106810781 NM_025076	-645692	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	-645739	-	FJ433885 TSC_hg19_v1_chr2_-_107502508	45988	-	AB058780 NM_001142351 TSC_hg19_v1_chr2_-_107502624	46122	-	TSC_hg19_v1_chr2_-_107503063 FJ433884	46565	-	NM_001144013|RGPD3|653489|RANBP2-like and GRIP domain containing 3##NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	0.62374	CTCF.p2:-7:0.624
chr6	42420929	42421036	reg1029185.p1	4.480	+	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	-1159	-	TSC_hg19_v1_chr6_-_42185603 NM_018141	-235365	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-235382	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	110768	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	110795	+	TSC_hg19_v1_chr6_+_42531956 AY061884 CU687884	111022	+	AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.85133	CTCF.p2:-47:0.449	CTCF.p2:77:0.402
chr10	135214723	135214893	reg1032106.p1	4.479	+	TSC_hg19_v1_chr10_+_135207660 NM_138384 BC026039 AK308997 BC004409 AK074976 AK293988 BC035721 EU831415 EU831508 BC026725 AK292515 AK125012	-7076	+	AF312698 BC032778 NM_152911 NM_207127 NM_207128 TSC_hg19_v1_chr10_+_135192774 AY541516 AY541513 AY541514 AY541515 AY541517 AY541518 AY541519 AY541520 AY541521 AY541523 AY541524 AY358418 DQ891313 DQ893351 DQ894497 DQ896670	-22051	+	BT007123 BC013264 TSC_hg19_v1_chr10_-_135186855 BC008906 D13900 NM_004092	-27922	-	BC040198 TSC_hg19_v1_chr10_-_135238130 NM_001012508	23294	-	TSC_hg19_v1_chr10_+_135340866 AK290822 NM_000773 J02625 AF182276 DQ149222 BC067435 BC067433 CU688292 AF084225 AJ853939 AJ853940 AJ877238	126124	+	AK309935 AK314978 BC034821 NM_001143763 NM_001143764	164301	-	NM_138384|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026039|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK308997|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC004409|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK074976|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK293988|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC035721|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831415|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831508|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026725|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK292515|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK125012|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AF312698|PAOX|196743|polyamine oxidase (exo-N4-amino)##BC032778|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_152911|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207127|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207128|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541516|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541513|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541514|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541515|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541517|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541518|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541519|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541520|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541521|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541523|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541524|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY358418|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ891313|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ893351|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ894497|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ896670|PAOX|196743|polyamine oxidase (exo-N4-amino)##BT007123|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##BC013264|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##BC008906|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##D13900|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##NM_004092|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##BC040198|SPRN|503542|shadow of prion protein homolog (zebrafish)##NM_001012508|SPRN|503542|shadow of prion protein homolog (zebrafish)##AK290822|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##NM_000773|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##J02625|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF182276|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##DQ149222|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067435|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067433|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF084225|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853939|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853940|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ877238|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AK309935|SYCE1|93426|synaptonemal complex central element protein 1##AK314978|SYCE1|93426|synaptonemal complex central element protein 1##BC034821|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143763|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143764|SYCE1|93426|synaptonemal complex central element protein 1	0.0	
chr10	49879709	49879871	reg1029530.p2	4.479	+	TSC_hg19_v1_chr10_-_49864302 AK055937	-15485	-	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	-66703	-	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	-270118	+	TSC_hg19_v1_chr10_+_49892917 BC034937	13100	+	AK127650 NM_020945	13725	+	NM_001006939 BC036722	242490	-	AK055937|ARHGAP22|58504|Rho GTPase activating protein 22##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22##BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##BC034937|WDFY4|57705|WDFY family member 4##AK127650|WDFY4|57705|WDFY family member 4##NM_020945|WDFY4|57705|WDFY family member 4##NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18	0.113327	
chr11	133415091	133415255	reg1027065.p2	4.479	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	-12859	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-601568	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-602159	-	AF521713 AK098717 NM_174927 BC058039	300208	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	411709	-	AJ416101 NM_001205329 NM_032801 AY358335 TSC_hg19_v1_chr11_+_133938938 AK074769 AF448478	523708	+	AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B##AJ416101|JAM3|83700|junctional adhesion molecule 3##NM_001205329|JAM3|83700|junctional adhesion molecule 3##NM_032801|JAM3|83700|junctional adhesion molecule 3##AY358335|JAM3|83700|junctional adhesion molecule 3##AK074769|JAM3|83700|junctional adhesion molecule 3##AF448478|JAM3|83700|junctional adhesion molecule 3	0.0	
chr15	59467193	59467314	reg1025881.p1	4.479	+	TSC_hg19_v1_chr15_+_59397344 NM_004701 AK001404 AL080146 BC105086 BC105112 AF087910 AK222611 AB020981 AF002822 AB587333 AM393577 BT019458 CR533527	-69882	+	TSC_hg19_v1_chr15_+_59359061 AK095327	-108175	+	BX647259 TSC_hg19_v1_chr15_+_59280332 AK131304	-186974	+	AY642121 BC022034 AY009108 NM_033195 AK312777 AK058192	31799	+	AB290177 TSC_hg19_v1_chr15_-_59665055	197801	-	TSC_hg19_v1_chr15_-_59665065 AK291688	197813	-	NM_004701|CCNB2|9133|cyclin B2##AK001404|CCNB2|9133|cyclin B2##AL080146|CCNB2|9133|cyclin B2##BC105086|CCNB2|9133|cyclin B2##BC105112|CCNB2|9133|cyclin B2##AF087910|CCNB2|9133|cyclin B2##AK222611|CCNB2|9133|cyclin B2##AB020981|CCNB2|9133|cyclin B2##AF002822|CCNB2|9133|cyclin B2##AM393577|CCNB2|9133|cyclin B2##BT019458|CCNB2|9133|cyclin B2##CR533527|CCNB2|9133|cyclin B2##AK095327|RNF111|54778|ring finger protein 111##BX647259|RNF111|54778|ring finger protein 111##AK131304|RNF111|54778|ring finger protein 111##AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B##BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AB290177|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE	0.405853	CTCF.p2:-35:0.406
chr16	27616965	27617101	reg1035156.p1	4.479	+	TSC_hg19_v1_chr16_+_27561464 NM_015202 AB011128 BC150276 BC131508	-55569	+	TSC_hg19_v1_chr16_-_27561248 NM_001520 U02619	-55764	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	-55802	-	BC016460 NM_144675	282444	-	TSC_hg19_v1_chr16_-_28074776 AY358206 NM_001109763	457769	-	AY026388 BC130304 BC144189 TSC_hg19_v1_chr16_-_28222816 AK123846	605752	-	NM_015202|KIAA0556|23247|KIAA0556##AB011128|KIAA0556|23247|KIAA0556##BC150276|KIAA0556|23247|KIAA0556##BC131508|KIAA0556|23247|KIAA0556##NM_001520|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##U02619|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC016460|GSG1L|146395|GSG1-like##NM_144675|GSG1L|146395|GSG1-like##AY358206|GSG1L|146395|GSG1-like##NM_001109763|GSG1L|146395|GSG1-like##AY026388|XPO6|23214|exportin 6##BC130304|XPO6|23214|exportin 6##BC144189|XPO6|23214|exportin 6##AK123846|XPO6|23214|exportin 6	0.997036	CTCF.p2:-7:0.997
chr16	68127921	68128030	reg1032773.p1	4.479	+	TSC_hg19_v1_chr16_+_68119350 L41067	-8606	+	TSC_hg19_v1_chr16_+_68119335 AB209824	-8637	+	TSC_hg19_v1_chr16_+_68119279 NM_004555 NM_173163 NM_173165	-8721	+	CU688826 BC030146 BC052309 TSC_hg19_v1_chr16_-_68270026 AK025571 NM_024939	142066	-	AK300596 AK074828 NM_012320 TSC_hg19_v1_chr16_+_68279275 AK296263 AK298494 AL110209 BC062605 AK001705 AK222790	151275	+	AB017494 TSC_hg19_v1_chr16_+_68279299 AY358425 EU832326	151336	+	L41067|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##AB209824|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_004555|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173163|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173165|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##BC030146|ESRP2|80004|epithelial splicing regulatory protein 2##BC052309|ESRP2|80004|epithelial splicing regulatory protein 2##AK025571|ESRP2|80004|epithelial splicing regulatory protein 2##NM_024939|ESRP2|80004|epithelial splicing regulatory protein 2##AK300596|PLA2G15|23659|phospholipase A2, group XV##AK074828|PLA2G15|23659|phospholipase A2, group XV##NM_012320|PLA2G15|23659|phospholipase A2, group XV##AK296263|PLA2G15|23659|phospholipase A2, group XV##AK298494|PLA2G15|23659|phospholipase A2, group XV##AL110209|PLA2G15|23659|phospholipase A2, group XV##BC062605|PLA2G15|23659|phospholipase A2, group XV##AK001705|PLA2G15|23659|phospholipase A2, group XV##AK222790|PLA2G15|23659|phospholipase A2, group XV##AB017494|PLA2G15|23659|phospholipase A2, group XV##AY358425|PLA2G15|23659|phospholipase A2, group XV##EU832326|PLA2G15|23659|phospholipase A2, group XV	0.492883	CTCF.p2:-10:0.493
chr3	119343090	119343270	reg1030952.p2	4.479	+	NM_001206960 NM_001206961 NM_015900 AK301880 AK222705 AK313519 BC035347 BC047703 U37591 AF035268 AF035269 AB527604 CU690470	-26453	+	BC063883 NM_001125 TSC_hg19_v1_chr3_+_119298606	-44615	+	TSC_hg19_v1_chr3_+_119298355 AK304560 AK291787	-44785	+	CU692240 AF204173 NM_022135 AK314819 BC044929	36172	-	TSC_hg19_v1_chr3_-_119396232 AK312143 BC105280 BC010933 L77701 NM_005694 BC108317	53066	-	TSC_hg19_v1_chr3_+_119421876 AF440403 BC035248 CR749242 NM_033364 AF497717 AK055558 BC126394 AK302699 AK309317 AK294413 AK303997 AK289914 HQ258654	78722	+	NM_001206960|PLA1A|51365|phospholipase A1 member A##NM_001206961|PLA1A|51365|phospholipase A1 member A##NM_015900|PLA1A|51365|phospholipase A1 member A##AK301880|PLA1A|51365|phospholipase A1 member A##AK222705|PLA1A|51365|phospholipase A1 member A##AK313519|PLA1A|51365|phospholipase A1 member A##BC035347|PLA1A|51365|phospholipase A1 member A##BC047703|PLA1A|51365|phospholipase A1 member A##U37591|PLA1A|51365|phospholipase A1 member A##AF035268|PLA1A|51365|phospholipase A1 member A##AF035269|PLA1A|51365|phospholipase A1 member A##BC063883|ADPRH|141|ADP-ribosylarginine hydrolase##NM_001125|ADPRH|141|ADP-ribosylarginine hydrolase##AK304560|ADPRH|141|ADP-ribosylarginine hydrolase##AK291787|ADPRH|141|ADP-ribosylarginine hydrolase##AF204173|POPDC2|64091|popeye domain containing 2##NM_022135|POPDC2|64091|popeye domain containing 2##AK314819|POPDC2|64091|popeye domain containing 2##BC044929|POPDC2|64091|popeye domain containing 2##AK312143|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC105280|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC010933|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##L77701|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_005694|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC108317|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##AF440403|C3orf15|89876|chromosome 3 open reading frame 15##BC035248|C3orf15|89876|chromosome 3 open reading frame 15##CR749242|C3orf15|89876|chromosome 3 open reading frame 15##NM_033364|C3orf15|89876|chromosome 3 open reading frame 15##AF497717|C3orf15|89876|chromosome 3 open reading frame 15##AK055558|C3orf15|89876|chromosome 3 open reading frame 15##BC126394|C3orf15|89876|chromosome 3 open reading frame 15##AK302699|C3orf15|89876|chromosome 3 open reading frame 15##AK309317|C3orf15|89876|chromosome 3 open reading frame 15##AK294413|C3orf15|89876|chromosome 3 open reading frame 15##AK303997|C3orf15|89876|chromosome 3 open reading frame 15##AK289914|C3orf15|89876|chromosome 3 open reading frame 15##HQ258654|C3orf15|89876|chromosome 3 open reading frame 15	0.0	
chr5	148648646	148648783	reg1033894.p2	4.479	+	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	-127524	+	AB075865 AL832651 AK300420 TSC_hg19_v1_chr5_-_148442626 BC113879 BC114486 AY341075 AB070620 NM_024577	-206043	-	NM_000024 TSC_hg19_v1_chr5_+_148206185 AK313151 BC012481 AK223025 BC073856 BC063486 X04827	-442528	+	TSC_hg19_v1_chr5_+_148651421 NM_001146337 NM_152406 BC040723	2700	+	TSC_hg19_v1_chr5_+_148651443 AK095980 AK074185 BC125093 BC125094	2748	+	NM_152407 TSC_hg19_v1_chr5_+_148725061 BC036678 AK294005 BC070090 AL832325 AK074293 CU687032	76324	+	NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3##AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface##X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface##NM_001146337|AFAP1L1|134265|actin filament associated protein 1-like 1##NM_152406|AFAP1L1|134265|actin filament associated protein 1-like 1##BC040723|AFAP1L1|134265|actin filament associated protein 1-like 1##AK095980|AFAP1L1|134265|actin filament associated protein 1-like 1##AK074185|AFAP1L1|134265|actin filament associated protein 1-like 1##BC125093|AFAP1L1|134265|actin filament associated protein 1-like 1##BC125094|AFAP1L1|134265|actin filament associated protein 1-like 1##NM_152407|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##BC036678|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##AK294005|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##BC070090|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##AL832325|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)##AK074293|GRPEL2|134266|GrpE-like 2, mitochondrial (E. coli)	0.997197	CTCF.p2:4:0.997
chr6	100053239	100053343	reg1032258.p1	4.479	+	TSC_hg19_v1_chr6_-_100016537 BC010135 AK298558 BC041123 NM_001013399 NM_005190	-36688	-	CU679631 CU691126 AB528579 AB125137 BC050726 TSC_hg19_v1_chr6_-_100016505 AK223247 M74091 AK291914 AK222768 BC026272 BC030159 BC056153	-36834	-	TSC_hg19_v1_chr6_+_99968921 BX647075 NM_001195131	-84392	+	AY004253 NM_021620	1358	+	AK123634 NM_001040179 NM_032503 AF347063	388819	-	NM_005068 U70212	858259	-	BC010135|CCNC|892|cyclin C##AK298558|CCNC|892|cyclin C##BC041123|CCNC|892|cyclin C##NM_001013399|CCNC|892|cyclin C##NM_005190|CCNC|892|cyclin C##AB125137|CCNC|892|cyclin C##BC050726|CCNC|892|cyclin C##AK223247|CCNC|892|cyclin C##M74091|CCNC|892|cyclin C##AK291914|CCNC|892|cyclin C##AK222768|CCNC|892|cyclin C##BC026272|CCNC|892|cyclin C##BC030159|CCNC|892|cyclin C##BC056153|CCNC|892|cyclin C##BX647075|LOC100130890|100130890|uncharacterized LOC100130890##NM_001195131|LOC100130890|100130890|uncharacterized LOC100130890##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)	0.243296	CTCF.p2:21:0.243
chr8	143375112	143375218	reg1026427.p2	4.479	+	BC144560 AK125848 AK131461 NM_207414	-857848	-	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	-943104	+	TSC_hg19_v1_chr8_+_142402120 AK311257	-973031	+	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	109372	-	AB005297 NM_001702	170211	+	AF193421 D87468 BC075802 BC012321 NM_015193 TSC_hg19_v1_chr8_-_143695839	320661	-	BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1##AB005297|BAI1|575|brain-specific angiogenesis inhibitor 1##NM_001702|BAI1|575|brain-specific angiogenesis inhibitor 1##AF193421|ARC|23237|activity-regulated cytoskeleton-associated protein##D87468|ARC|23237|activity-regulated cytoskeleton-associated protein##BC075802|ARC|23237|activity-regulated cytoskeleton-associated protein##BC012321|ARC|23237|activity-regulated cytoskeleton-associated protein##NM_015193|ARC|23237|activity-regulated cytoskeleton-associated protein	0.046733	
chr10	45777625	45777746	reg1030937.p1	4.478	+	TSC_hg19_v1_chr10_-_45496265 AK311351 HQ258049 BC062568 BC130369 BC130395 AK055129 NM_001039380	-281321	-	NM_006963 AK291508 AK312278 BC053687 BC010642	-281358	+	BC011402 AB025244 TSC_hg19_v1_chr10_-_45474258 AK002191 AK098476 AL136653 AB022718 AK300839 AK312496 NM_007021	-303416	-	AK131555 NM_001004297	33370	-	TSC_hg19_v1_chr10_+_45869638 AB208946 NM_000698 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223	91952	+	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	92012	+	AK311351|C10orf25|220979|chromosome 10 open reading frame 25##HQ258049|C10orf25|220979|chromosome 10 open reading frame 25##BC062568|C10orf25|220979|chromosome 10 open reading frame 25##BC130369|C10orf25|220979|chromosome 10 open reading frame 25##BC130395|C10orf25|220979|chromosome 10 open reading frame 25##AK055129|C10orf25|220979|chromosome 10 open reading frame 25##NM_001039380|C10orf25|220979|chromosome 10 open reading frame 25##NM_006963|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK291508|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK312278|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC053687|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC010642|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC011402|C10orf10|11067|chromosome 10 open reading frame 10##AB025244|C10orf10|11067|chromosome 10 open reading frame 10##AK002191|C10orf10|11067|chromosome 10 open reading frame 10##AK098476|C10orf10|11067|chromosome 10 open reading frame 10##AL136653|C10orf10|11067|chromosome 10 open reading frame 10##AB022718|C10orf10|11067|chromosome 10 open reading frame 10##AK300839|C10orf10|11067|chromosome 10 open reading frame 10##AK312496|C10orf10|11067|chromosome 10 open reading frame 10##NM_007021|C10orf10|11067|chromosome 10 open reading frame 10##AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##AB208946|ALOX5|240|arachidonate 5-lipoxygenase##NM_000698|ALOX5|240|arachidonate 5-lipoxygenase##AK225603|ALOX5|240|arachidonate 5-lipoxygenase##BC130332|ALOX5|240|arachidonate 5-lipoxygenase##BC132677|ALOX5|240|arachidonate 5-lipoxygenase##BC143985|ALOX5|240|arachidonate 5-lipoxygenase##BC143986|ALOX5|240|arachidonate 5-lipoxygenase##AK315223|ALOX5|240|arachidonate 5-lipoxygenase##BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase	0.0	
chr13	24374170	24374307	reg1033302.p1	4.478	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	-220706	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-229783	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-366398	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	88778	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	89276	-	NM_001135816 BC142999	89354	+	BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.0	
chr1	41235580	41235710	reg1030907.p2	4.478	+	AF191744 AB385526 BT020081 U62296 TSC_hg19_v1_chr1_+_41204591	-31095	+	TSC_hg19_v1_chr1_-_41157737 AK094323	-77922	-	TSC_hg19_v1_chr1_+_41157659 NM_001142590 AK127677	-77978	+	TSC_hg19_v1_chr1_+_41249485 AF105202 NM_004700 NM_172163	13936	+	TSC_hg19_v1_chr1_+_41284599 AK074957	48972	+	TSC_hg19_v1_chr1_-_41328006 BC052559 NM_133467	92364	-	AF191744|NFYC|4802|nuclear transcription factor Y, gamma##BT020081|NFYC|4802|nuclear transcription factor Y, gamma##U62296|NFYC|4802|nuclear transcription factor Y, gamma##AK094323|LOC100130557|100130557|uncharacterized LOC100130557##NM_001142590|NFYC|4802|nuclear transcription factor Y, gamma##AK127677|NFYC|4802|nuclear transcription factor Y, gamma##AF105202|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_004700|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_172163|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##AK074957|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##BC052559|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##NM_133467|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4	0.930746	CTCF.p2:3:0.931
chr1	59762576	59762690	reg1023434.p2	4.478	+	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	-21	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-512898	-	TSC_hg19_v1_chr1_-_59248287 BC009874	-514268	-	NM_001244714 AK054842	13120	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	518019	+	AF144566 CU689440 DQ890862 DQ894017 AB528452 AB080265 NM_000775 U37143 AK315387 TSC_hg19_v1_chr1_-_60392444	629752	-	NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##BC009874|JUN|3725|jun proto-oncogene##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)##AF144566|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ890862|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##DQ894017|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AB080265|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##NM_000775|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##U37143|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2##AK315387|CYP2J2|1573|cytochrome P450, family 2, subfamily J, polypeptide 2	0.0	
chr16	88748251	88748385	reg1018439.p3	4.478	+	TSC_hg19_v1_chr16_+_88729781 BC015583 BC050404	-18523	+	TSC_hg19_v1_chr16_+_88729753 BX640980	-18567	+	BT006930 AB527587 DQ890562 DQ893724 TSC_hg19_v1_chr16_-_88729519 NM_002461 U49260 AB209229 BC000011	-18801	-	BC041461 AB464228 TSC_hg19_v1_chr16_-_88752874	4513	-	TSC_hg19_v1_chr16_-_88752882 BC107058 NM_178310	4573	-	AK057106 NM_001171816	21706	-	BC015583|MGC23284|197187|uncharacterized LOC197187##BC050404|MGC23284|197187|uncharacterized LOC197187##BX640980|MGC23284|197187|uncharacterized LOC197187##BT006930|MVD|4597|mevalonate (diphospho) decarboxylase##DQ890562|MVD|4597|mevalonate (diphospho) decarboxylase##DQ893724|MVD|4597|mevalonate (diphospho) decarboxylase##NM_002461|MVD|4597|mevalonate (diphospho) decarboxylase##U49260|MVD|4597|mevalonate (diphospho) decarboxylase##AB209229|MVD|4597|mevalonate (diphospho) decarboxylase##BC000011|MVD|4597|mevalonate (diphospho) decarboxylase##BC041461|SNAI3|333929|snail homolog 3 (Drosophila)##BC107058|SNAI3|333929|snail homolog 3 (Drosophila)##NM_178310|SNAI3|333929|snail homolog 3 (Drosophila)##AK057106|RNF166|115992|ring finger protein 166##NM_001171816|RNF166|115992|ring finger protein 166	0.0	
chr19	17246297	17246469	reg1027444.p1	4.478	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-59790	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-60062	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-108843	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	79789	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	79822	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	90651	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.0	
chr20	48438458	48438557	reg1032856.p2	4.478	+	CR749638 TSC_hg19_v1_chr20_+_48429436 AB023156 BC112213 AK295803 AK308328 AK131001 AK295665 AK310530 AK295822	-9089	+	NM_015266 TSC_hg19_v1_chr20_+_48429364 AK300318	-9199	+	TSC_hg19_v1_chr20_-_48330471 NM_004776	-108041	-	AK289644 NM_001135773	91768	-	BC009481 AB018300 TSC_hg19_v1_chr20_-_48532030 AK023229	93503	-	TSC_hg19_v1_chr20_-_48532056 U28164	93540	-	CR749638|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AB023156|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##BC112213|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295803|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK308328|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK131001|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295665|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK310530|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295822|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##NM_015266|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK300318|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AK289644|SPATA2|9825|spermatogenesis associated 2##NM_001135773|SPATA2|9825|spermatogenesis associated 2##BC009481|SPATA2|9825|spermatogenesis associated 2##AB018300|SPATA2|9825|spermatogenesis associated 2##AK023229|SPATA2|9825|spermatogenesis associated 2##U28164|SPATA2|9825|spermatogenesis associated 2	0.0	
chr2	97304077	97304247	reg1028931.p1	4.478	+	TSC_hg19_v1_chr2_-_97304084 AK023813 AY050169 AK304011 NM_001115016 NM_017991	-64	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	-95	-	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	-143	-	AK126032 AY461813 NM_001113382	4361	+	BC000347 BC005822 BC005862 AB528167 AJ549957 AM392707 EU831637 EU831721 TSC_hg19_v1_chr2_-_97405791 BC067265 AY358929 AK222828 BX648002	101621	-	AK304515 AK075347 AK295463 AK299740 AK301077 AK308085 AK316331 AL136617 TSC_hg19_v1_chr2_-_97405802 AK312249 NM_001142292 NM_030805 AK310100	101651	-	AK023813|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AY050169|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK304011|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##NM_001115016|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##NM_017991|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK126032|FER1L5|90342|fer-1-like 5 (C. elegans)##AY461813|FER1L5|90342|fer-1-like 5 (C. elegans)##NM_001113382|FER1L5|90342|fer-1-like 5 (C. elegans)##BC000347|LMAN2L|81562|lectin, mannose-binding 2-like##BC005822|LMAN2L|81562|lectin, mannose-binding 2-like##BC005862|LMAN2L|81562|lectin, mannose-binding 2-like##AJ549957|LMAN2L|81562|lectin, mannose-binding 2-like##AM392707|LMAN2L|81562|lectin, mannose-binding 2-like##EU831637|LMAN2L|81562|lectin, mannose-binding 2-like##EU831721|LMAN2L|81562|lectin, mannose-binding 2-like##BC067265|LMAN2L|81562|lectin, mannose-binding 2-like##AY358929|LMAN2L|81562|lectin, mannose-binding 2-like##AK222828|LMAN2L|81562|lectin, mannose-binding 2-like##BX648002|LMAN2L|81562|lectin, mannose-binding 2-like##AK304515|LMAN2L|81562|lectin, mannose-binding 2-like##AK075347|LMAN2L|81562|lectin, mannose-binding 2-like##AK295463|LMAN2L|81562|lectin, mannose-binding 2-like##AK299740|LMAN2L|81562|lectin, mannose-binding 2-like##AK301077|LMAN2L|81562|lectin, mannose-binding 2-like##AK308085|LMAN2L|81562|lectin, mannose-binding 2-like##AK316331|LMAN2L|81562|lectin, mannose-binding 2-like##AL136617|LMAN2L|81562|lectin, mannose-binding 2-like##AK312249|LMAN2L|81562|lectin, mannose-binding 2-like##NM_001142292|LMAN2L|81562|lectin, mannose-binding 2-like##NM_030805|LMAN2L|81562|lectin, mannose-binding 2-like##AK310100|LMAN2L|81562|lectin, mannose-binding 2-like	0.0	
chr4	130448110	130448232	reg1030661.p2	4.478	+	NM_001099783	-430890	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-433304	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-433581	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	3622285	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	3625112	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	4674747	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.949753	CTCF.p2:-8:0.950
chr14	93049493	93049674	reg1024720.p1	4.477	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-69624	+	NM_153646 AF520704 AF520705 BC069653	-259407	+	AK295059 NM_153647	-260047	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	69053	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	69240	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	165376	-	AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain	0.0	
chr15	66116581	66116730	reg1030109.p1	4.477	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-32062	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	-32182	-	AF062922 NM_004727	-202386	+	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	45192	+	TSC_hg19_v1_chr15_-_66321664 AK054827	205038	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	429422	-	AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##AF062922|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##NM_004727|SLC24A1|9187|solute carrier family 24 (sodium/potassium/calcium exchanger), member 1##AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11	0.0	
chr19	42527931	42528036	reg1031970.p1	4.477	+	TSC_hg19_v1_chr19_-_42498383 BC009282 BC009394 BC015566 BC013763 AK307921 AK316069 AK223569 AK293784 AK295078 NM_152296	-29611	-	AK295833 TSC_hg19_v1_chr19_-_42498254	-29746	-	TSC_hg19_v1_chr19_-_42463500 NM_006423	-64463	-	S40369 AJ249209 BC131717 NM_002088	41955	-	TSC_hg19_v1_chr19_+_42580286 NM_022752	52299	+	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	52383	+	BC009282|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC009394|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC015566|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##BC013763|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK307921|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK316069|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK223569|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK293784|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK295078|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##NM_152296|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##AK295833|ATP1A3|478|ATPase, Na+/K+ transporting, alpha 3 polypeptide##NM_006423|RABAC1|10567|Rab acceptor 1 (prenylated)##S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_022752|ZNF574|64763|zinc finger protein 574##AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574	0.242729	CTCF.p2:-1:0.243
chr2	183632490	183632590	reg1027291.p1	4.477	+	TSC_hg19_v1_chr2_+_183608333 AK074905	-24190	+	TSC_hg19_v1_chr2_+_183582683 BC107425 AF314529 AY089971 HQ258514 HQ258651 AL832646 AK027450	-49793	+	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	-51466	+	BT019883 DQ890944 DQ894106 AK130009 U68057 U91903 BC027855 AK312741 U24163 NM_001463	98848	-	TSC_hg19_v1_chr2_-_183903062 BT007033 AB383914 DQ893545 DQ893809 AB014509 AK292914 BC015025	270444	-	TSC_hg19_v1_chr2_-_183903230 NM_013436 NM_205842	270704	-	AK074905|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC107425|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF314529|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY089971|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258514|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258651|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832646|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027450|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BT019883|FRZB|2487|frizzled-related protein##DQ890944|FRZB|2487|frizzled-related protein##DQ894106|FRZB|2487|frizzled-related protein##AK130009|FRZB|2487|frizzled-related protein##U68057|FRZB|2487|frizzled-related protein##U91903|FRZB|2487|frizzled-related protein##BC027855|FRZB|2487|frizzled-related protein##AK312741|FRZB|2487|frizzled-related protein##U24163|FRZB|2487|frizzled-related protein##NM_001463|FRZB|2487|frizzled-related protein##BT007033|NCKAP1|10787|NCK-associated protein 1##DQ893545|NCKAP1|10787|NCK-associated protein 1##DQ893809|NCKAP1|10787|NCK-associated protein 1##AB014509|NCKAP1|10787|NCK-associated protein 1##AK292914|NCKAP1|10787|NCK-associated protein 1##BC015025|NCKAP1|10787|NCK-associated protein 1##NM_013436|NCKAP1|10787|NCK-associated protein 1##NM_205842|NCKAP1|10787|NCK-associated protein 1	0.049157	
chr3	5048709	5048834	reg1021823.p2	4.477	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-27417	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	-27590	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	-27655	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	115184	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	115320	+	TSC_hg19_v1_chr3_+_5229344 AK298511	180556	+	AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	0.0	
chr5	143073469	143073612	reg1030091.p2	4.477	+	NM_001018074 NM_001018075 NM_001018077	-258464	-	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-289374	-	TSC_hg19_v1_chr5_-_142784036 AK302050 NM_001018076	-289508	-	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	118218	+	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	476595	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	476636	-	NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5	0.0	
chr6	159331887	159332067	reg1030410.p2	4.477	+	NM_001195032	-22359	+	TSC_hg19_v1_chr6_-_159240446 NM_001111077	-91521	-	TSC_hg19_v1_chr6_-_159240401 AK296738	-91564	-	TSC_hg19_v1_chr6_-_159420766 BC035675	88792	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	88842	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	89244	-	NM_001195032|C6orf99|100130967|chromosome 6 open reading frame 99##NM_001111077|EZR|7430|ezrin##AK296738|EZR|7430|ezrin##BC035675|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)	0.0	
chr1	1285226	1285319	reg1024741.p1	4.476	+	TSC_hg19_v1_chr1_-_1284799 AK095867	-489	-	AK293286 CU690690 AF006011 AB385564 BC025292 NM_004421 BC050454 TSC_hg19_v1_chr1_-_1284533	-857	-	AB527345 NM_152228	-18549	+	TSC_hg19_v1_chr1_-_1293914 AK304615 AK225028 BC006213 BC017312 NM_032348 AY358391 AK027269 AK293442 AK315510	8653	-	TSC_hg19_v1_chr1_-_1310537 BC035595	25262	-	TSC_hg19_v1_chr1_-_1310563 NM_001127230 AK000615 NM_001127229 BC062333	25301	-	AK095867|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##AK293286|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##AF006011|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##BC025292|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##NM_004421|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##BC050454|DVL1|1855|dishevelled, dsh homolog 1 (Drosophila)##NM_152228|TAS1R3|83756|taste receptor, type 1, member 3##AK304615|MXRA8|54587|matrix-remodelling associated 8##AK225028|MXRA8|54587|matrix-remodelling associated 8##BC006213|MXRA8|54587|matrix-remodelling associated 8##BC017312|MXRA8|54587|matrix-remodelling associated 8##NM_032348|MXRA8|54587|matrix-remodelling associated 8##AY358391|MXRA8|54587|matrix-remodelling associated 8##AK027269|MXRA8|54587|matrix-remodelling associated 8##AK293442|MXRA8|54587|matrix-remodelling associated 8##AK315510|MXRA8|54587|matrix-remodelling associated 8##BC035595|AURKAIP1|54998|aurora kinase A interacting protein 1##NM_001127230|AURKAIP1|54998|aurora kinase A interacting protein 1##AK000615|AURKAIP1|54998|aurora kinase A interacting protein 1##NM_001127229|AURKAIP1|54998|aurora kinase A interacting protein 1##BC062333|AURKAIP1|54998|aurora kinase A interacting protein 1	0.998824	CTCF.p2:66:0.999
chr11	85375271	85375390	reg1033204.p1	4.476	+	NM_001244735 NM_032273 AL136941 AK312081 BC007875	-16327	+	NM_001193537 NM_001193538 NM_018480 TSC_hg19_v1_chr11_+_85339636 AK298189 BC017574 BC107900 AF220193 AF246240 AK291150 BC038933 BC012065	-35684	+	CR749820 NM_001142699	-37017	-	TSC_hg19_v1_chr11_-_85376147 AF039942	777	-	TSC_hg19_v1_chr11_-_85376174 BC060807 NM_001039618	862	-	BC044814 AK095478 NM_152723	21937	-	NM_001244735|TMEM126A|84233|transmembrane protein 126A##NM_032273|TMEM126A|84233|transmembrane protein 126A##AL136941|TMEM126A|84233|transmembrane protein 126A##AK312081|TMEM126A|84233|transmembrane protein 126A##BC007875|TMEM126A|84233|transmembrane protein 126A##NM_001193537|TMEM126B|55863|transmembrane protein 126B##NM_001193538|TMEM126B|55863|transmembrane protein 126B##NM_018480|TMEM126B|55863|transmembrane protein 126B##AK298189|TMEM126B|55863|transmembrane protein 126B##BC017574|TMEM126B|55863|transmembrane protein 126B##BC107900|TMEM126B|55863|transmembrane protein 126B##AF220193|TMEM126B|55863|transmembrane protein 126B##AF246240|TMEM126B|55863|transmembrane protein 126B##AK291150|TMEM126B|55863|transmembrane protein 126B##BC038933|TMEM126B|55863|transmembrane protein 126B##BC012065|TMEM126B|55863|transmembrane protein 126B##CR749820|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142699|DLG2|1740|discs, large homolog 2 (Drosophila)##AF039942|CREBZF|58487|CREB/ATF bZIP transcription factor##BC060807|CREBZF|58487|CREB/ATF bZIP transcription factor##NM_001039618|CREBZF|58487|CREB/ATF bZIP transcription factor##BC044814|CCDC89|220388|coiled-coil domain containing 89##AK095478|CCDC89|220388|coiled-coil domain containing 89##NM_152723|CCDC89|220388|coiled-coil domain containing 89	0.220723	
chr12	24178494	24178601	reg1027374.p1	4.476	+	BC014929 TSC_hg19_v1_chr12_-_24103967 AK303970	-74586	-	TSC_hg19_v1_chr12_-_24103855 AK299607 AK096569	-74693	-	AK074317 TSC_hg19_v1_chr12_-_24102605 BC065532 AB081589 NM_006940	-75945	-	TSC_hg19_v1_chr12_-_24715349 AB081588 NM_152989 BC060773	536818	-	BC104436 BC104437 TSC_hg19_v1_chr12_-_24737100 AK057456	558546	-	TSC_hg19_v1_chr12_-_25055230 CR749308 BC033864 NM_001178094	876727	-	BC014929|SOX5|6660|SRY (sex determining region Y)-box 5##AK303970|SOX5|6660|SRY (sex determining region Y)-box 5##AK299607|SOX5|6660|SRY (sex determining region Y)-box 5##AK096569|SOX5|6660|SRY (sex determining region Y)-box 5##AK074317|SOX5|6660|SRY (sex determining region Y)-box 5##BC065532|SOX5|6660|SRY (sex determining region Y)-box 5##AB081589|SOX5|6660|SRY (sex determining region Y)-box 5##NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5##AB081588|SOX5|6660|SRY (sex determining region Y)-box 5##NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5##BC060773|SOX5|6660|SRY (sex determining region Y)-box 5##BC104436|LINC00477|144360|long intergenic non-protein coding RNA 477##BC104437|LINC00477|144360|long intergenic non-protein coding RNA 477##AK057456|LINC00477|144360|long intergenic non-protein coding RNA 477##CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	0.0	
chr16	71563262	71563435	reg1031550.p1	4.476	+	NM_005769 AF131235 NM_001166395 AK026635 AK074746	-3255	+	AK292260 BC030658 AK057330 BC047091 NM_006961	-40133	-	AK123826 TSC_hg19_v1_chr16_+_71496196	-67160	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	47624	-	BC005052 NM_001017967 NM_052858 AK307585 BC011893 BC013376 AK056842 AK292185 CU680584	96749	+	AB463166 AM393067 AM393542 BC129927 BC129983 NM_015020	185352	-	NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19##X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase##BC005052|MARVELD3|91862|MARVEL domain containing 3##NM_001017967|MARVELD3|91862|MARVEL domain containing 3##NM_052858|MARVELD3|91862|MARVEL domain containing 3##AK307585|MARVELD3|91862|MARVEL domain containing 3##BC011893|MARVELD3|91862|MARVEL domain containing 3##BC013376|MARVELD3|91862|MARVEL domain containing 3##AK056842|MARVELD3|91862|MARVEL domain containing 3##AK292185|MARVELD3|91862|MARVEL domain containing 3##AM393067|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AM393542|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129927|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129983|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##NM_015020|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2	0.0	
chr17	1419226	1419406	reg1000932.p3	4.476	+	U45973 TSC_hg19_v1_chr17_-_1413071	-6283	-	AB210015 AK172742 AK292910 TSC_hg19_v1_chr17_-_1395993 BC068013 NM_001080779	-23341	-	TSC_hg19_v1_chr17_-_1394974 NM_033375	-24371	-	TSC_hg19_v1_chr17_-_1419907 DQ892815 DQ896061 AB529166 AK297955 AK303907 AK307293 AB036829 AB036830 AK312585 BC004362	650	-	TSC_hg19_v1_chr17_-_1420177 AK312844 NM_001135642 NM_016532 NM_130766	863	-	BC082976 TSC_hg19_v1_chr17_-_1466077 BC027177 D30036 M73704 BC045108 BC068538 NM_006224	46766	-	U45973|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB210015|MYO1C|4641|myosin IC##AK172742|MYO1C|4641|myosin IC##AK292910|MYO1C|4641|myosin IC##BC068013|MYO1C|4641|myosin IC##NM_001080779|MYO1C|4641|myosin IC##NM_033375|MYO1C|4641|myosin IC##DQ892815|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ896061|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK297955|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK303907|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK307293|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036829|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036830|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312585|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC004362|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312844|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_001135642|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_016532|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_130766|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC082976|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC027177|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D30036|PITPNA|5306|phosphatidylinositol transfer protein, alpha##M73704|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC045108|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC068538|PITPNA|5306|phosphatidylinositol transfer protein, alpha##NM_006224|PITPNA|5306|phosphatidylinositol transfer protein, alpha	0.0	
chr17	1945306	1945402	reg1027441.p2	4.476	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-46	+	TSC_hg19_v1_chr17_+_1933446 S81752 U34880 AF321876 NM_001383 AK314015 BC096086 BC096087 BC096088 BC096089 BC003099	-11933	+	BC128608 NM_178568	-17177	-	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	13044	+	DQ187313 NM_001098202	14203	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	261458	-	NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##S81752|DPH1|1801|DPH1 homolog (S. cerevisiae)##U34880|DPH1|1801|DPH1 homolog (S. cerevisiae)##AF321876|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_001383|DPH1|1801|DPH1 homolog (S. cerevisiae)##AK314015|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096086|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096087|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096088|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096089|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC003099|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC128608|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_178568|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.076022	
chr17	34899891	34900046	reg1031545.p1	4.476	+	TSC_hg19_v1_chr17_+_34891362 AK094752 BC144220 NM_178517	-8586	+	AB209035 AK293903 NM_001033580 NM_001163735 NM_025109	-8685	-	TSC_hg19_v1_chr17_+_34890824 BC054025	-9128	+	TSC_hg19_v1_chr17_-_34900675 AL049275 BC041980	724	-	NM_024835 TSC_hg19_v1_chr17_+_34900798 AK292161 AK024883 AF268387 BC137491	835	+	TSC_hg19_v1_chr17_+_34901498 AK290687 AF126964	1544	+	AK094752|PIGW|284098|phosphatidylinositol glycan anchor biosynthesis, class W##NM_178517|PIGW|284098|phosphatidylinositol glycan anchor biosynthesis, class W##AB209035|MYO19|80179|myosin XIX##AK293903|MYO19|80179|myosin XIX##NM_001033580|MYO19|80179|myosin XIX##NM_001163735|MYO19|80179|myosin XIX##NM_025109|MYO19|80179|myosin XIX##AL049275|DKFZp564H213|440432|uncharacterized LOC440432##BC041980|DKFZp564H213|440432|uncharacterized LOC440432##NM_024835|GGNBP2|79893|gametogenetin binding protein 2##AK292161|GGNBP2|79893|gametogenetin binding protein 2##AK024883|GGNBP2|79893|gametogenetin binding protein 2##AF268387|GGNBP2|79893|gametogenetin binding protein 2##BC137491|GGNBP2|79893|gametogenetin binding protein 2##AK290687|GGNBP2|79893|gametogenetin binding protein 2##AF126964|GGNBP2|79893|gametogenetin binding protein 2	0.0	
chr22	39842426	39842606	reg1031717.p1	4.476	+	TSC_hg19_v1_chr22_+_39795812 AK291668 AK316004 AK308903 AB591024 CU690722	-46705	+	BC050554 NM_006116 NM_153497 TSC_hg19_v1_chr22_+_39795796 AK296314 BC038582 AF425640 AK312456 U49928	-46746	+	AJ002303 NM_145738	-82342	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	10804	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	11020	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	40774	+	AK291668|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK316004|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK308903|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##BC050554|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_006116|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_153497|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK296314|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##BC038582|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AF425640|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK312456|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##U49928|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AJ002303|SYNGR1|9145|synaptogyrin 1##NM_145738|SYNGR1|9145|synaptogyrin 1##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	0.075274	
chr3	14156002	14156098	reg1027531.p2	4.476	+	BC008811 NM_004625	-234433	-	AK304827 NM_001165035	-545811	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	-565387	+	TSC_hg19_v1_chr3_-_14166228 BC017082	10183	-	TSC_hg19_v1_chr3_-_14166250 BC033775	10200	-	TSC_hg19_v1_chr3_-_14166360 AK290764 AK056271	10276	-	BC008811|WNT7A|7476|wingless-type MMTV integration site family, member 7A##NM_004625|WNT7A|7476|wingless-type MMTV integration site family, member 7A##AK304827|FBLN2|2199|fibulin 2##NM_001165035|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2##BC017082|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##BC033775|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##AK290764|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##AK056271|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4	0.365452	CTCF.p2:7:0.365
chr6	116538329	116538428	reg1028279.p1	4.476	+	BC130621 BC130623 NM_000493	-91118	-	AK097758 TSC_hg19_v1_chr6_-_116422450	-115948	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	-116369	+	AB385375 BC040453 TSC_hg19_v1_chr6_-_116575239 AB018264 NM_021648 AK302542 AK091559	36857	-	AK026849 TSC_hg19_v1_chr6_-_116600165	61772	-	TSC_hg19_v1_chr6_-_116601062 CR533535 AK297717	62305	-	BC130621|COL10A1|1300|collagen, type X, alpha 1##BC130623|COL10A1|1300|collagen, type X, alpha 1##NM_000493|COL10A1|1300|collagen, type X, alpha 1##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1##BC040453|TSPYL4|23270|TSPY-like 4##AB018264|TSPYL4|23270|TSPY-like 4##NM_021648|TSPYL4|23270|TSPY-like 4##AK302542|TSPYL4|23270|TSPY-like 4##AK091559|TSPYL4|23270|TSPY-like 4##AK026849|TSPYL1|7259|TSPY-like 1##CR533535|TSPYL1|7259|TSPY-like 1	0.045651	
chr1	234743892	234744062	reg1031104.p1	4.475	+	TSC_hg19_v1_chr1_-_234743861 AK309579	-119	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-146	-	TSC_hg19_v1_chr1_-_234743489 BC020516	-451	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	1269	-	TSC_hg19_v1_chr1_-_234895746 AF193050	151797	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	548112	-	BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.0	
chr7	136372587	136372741	reg1033106.p1	4.475	+	BC013989 TSC_hg19_v1_chr7_-_135662202 NM_001128619 NM_145808	-710462	-	TSC_hg19_v1_chr7_-_135662107 AF106075 AL834231 BC028093 AK309816 AK056225	-710574	-	AB489167 AM393216 AM393266 TSC_hg19_v1_chr7_-_135661945	-710768	-	AY034603 AY219704 NM_001006627 NM_001006630 AK290236 AL832585	180742	+	AK125233 AY034604 AY456125 AY456126 AY456127 NM_000739 NM_001006631 NM_001006632 AY219705 NM_001006626 AY219703 NM_001006629 AY034605 NM_001006628 TSC_hg19_v1_chr7_+_136554002	181253	+	TSC_hg19_v1_chr7_-_137028305 D90226	655639	-	NM_001128619|LUZP6|767558|leucine zipper protein 6##NM_145808|MTPN|136319|myotrophin##AF106075|MTPN|136319|myotrophin##AL834231|MTPN|136319|myotrophin##BC028093|MTPN|136319|myotrophin##AK309816|MTPN|136319|myotrophin##AK056225|MTPN|136319|myotrophin##AM393216|MTPN|136319|myotrophin##AM393266|MTPN|136319|myotrophin##AY034603|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219704|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006627|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006630|CHRM2|1129|cholinergic receptor, muscarinic 2##AK290236|CHRM2|1129|cholinergic receptor, muscarinic 2##AL832585|CHRM2|1129|cholinergic receptor, muscarinic 2##AK125233|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034604|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456125|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456126|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456127|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_000739|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006631|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006632|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219705|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006626|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219703|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006629|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034605|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006628|CHRM2|1129|cholinergic receptor, muscarinic 2##D90226|PTN|5764|pleiotrophin	0.937597	CTCF.p2:3:0.938
chr9	89951525	89951664	reg1003623.p1	4.475	+	AK127445 NM_001001709 BC132741 BC136791 HQ258059	-187993	+	L13698 NM_002048	-389491	-	TSC_hg19_v1_chr9_-_88969326 AL832193 CR936608 AK055546 CR933644 AL832026 BX641077 CR933643 BC111003 NM_001185059 NM_001185074 NM_024617	-982221	-	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	160992	+	TSC_hg19_v1_chr9_+_90112781 NM_004938 X76104 BC003614 AK295119	161274	+	NM_001912 NM_145918 TSC_hg19_v1_chr9_+_90341001	389399	+	AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##L13698|GAS1|2619|growth arrest-specific 1##NM_002048|GAS1|2619|growth arrest-specific 1##AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1##NM_004938|DAPK1|1612|death-associated protein kinase 1##X76104|DAPK1|1612|death-associated protein kinase 1##AK295119|DAPK1|1612|death-associated protein kinase 1##NM_001912|CTSL1|1514|cathepsin L1##NM_145918|CTSL1|1514|cathepsin L1	0.015719	
chr14	34411015	34411137	reg1031764.p1	4.474	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1002586	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1612540	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-1864570	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	9073	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	520411	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	597809	-	AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein	0.100431	
chr1	48996530	48996658	reg1033067.p1	4.474	+	TSC_hg19_v1_chr1_-_48937900 AK301770 AK000869 NM_019073	-58749	-	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	-58916	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	-308202	+	BC011804 AK021650 CU675869 NM_024603 BC007932	245903	-	TSC_hg19_v1_chr1_-_50489560 BC035739 AK094826 AK294394	1492953	-	TSC_hg19_v1_chr1_-_50489627 AK294633 AK296221 NM_032785	1493053	-	AK301770|SPATA6|54558|spermatogenesis associated 6##AK000869|SPATA6|54558|spermatogenesis associated 6##NM_019073|SPATA6|54558|spermatogenesis associated 6##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC011804|BEND5|79656|BEN domain containing 5##AK021650|BEND5|79656|BEN domain containing 5##NM_024603|BEND5|79656|BEN domain containing 5##BC007932|BEND5|79656|BEN domain containing 5##BC035739|AGBL4|84871|ATP/GTP binding protein-like 4##AK094826|AGBL4|84871|ATP/GTP binding protein-like 4##AK294394|AGBL4|84871|ATP/GTP binding protein-like 4##AK294633|AGBL4|84871|ATP/GTP binding protein-like 4##AK296221|AGBL4|84871|ATP/GTP binding protein-like 4##NM_032785|AGBL4|84871|ATP/GTP binding protein-like 4	0.982216	CTCF.p2:2:0.982
chr15	50408779	50408875	reg1028305.p1	4.474	+	AB075819 TSC_hg19_v1_chr15_-_50405521	-3311	-	TSC_hg19_v1_chr15_+_49913254 NM_001144955 NM_020234 BC018028 AF168717 AK290184 BC093073 BC032535	-495578	+	BC048125 BC048139 AK057362 NM_152647	-495744	-	TSC_hg19_v1_chr15_-_50411492 BC144298 BC144297 NM_024837	2639	-	TSC_hg19_v1_chr15_+_50474425 AK290262 NM_001159629 NM_003645 AF096290 AK222859 D88308 AK223145 BC057770 CU691220	65663	+	AK308833 NM_002112	149334	-	AB075819|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_001144955|DTWD1|56986|DTW domain containing 1##NM_020234|DTWD1|56986|DTW domain containing 1##BC018028|DTWD1|56986|DTW domain containing 1##AF168717|DTWD1|56986|DTW domain containing 1##AK290184|DTWD1|56986|DTW domain containing 1##BC093073|DTWD1|56986|DTW domain containing 1##BC032535|DTWD1|56986|DTW domain containing 1##BC048125|C15orf33|196951|chromosome 15 open reading frame 33##BC048139|C15orf33|196951|chromosome 15 open reading frame 33##AK057362|C15orf33|196951|chromosome 15 open reading frame 33##NM_152647|C15orf33|196951|chromosome 15 open reading frame 33##BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4##AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK308833|HDC|3067|histidine decarboxylase##NM_002112|HDC|3067|histidine decarboxylase	0.12999	
chr15	63340560	63340653	reg1007440.p2	4.474	+	M19715 TSC_hg19_v1_chr15_+_63336282	-4328	+	L02923 TSC_hg19_v1_chr15_+_63335956	-4648	+	M19714 TSC_hg19_v1_chr15_+_63335095	-5516	+	TSC_hg19_v1_chr15_+_63340667 AB209041 NM_001018008 BC053545 BC050473 AK301319 AK298625 AB385207 CU690980 DQ424903 EU832801 GQ129381 L02922 AF474156	83	+	NM_032857 NM_171846 BC067288 TSC_hg19_v1_chr15_+_63414026 AK027808	73410	+	TSC_hg19_v1_chr15_+_63414037 AY358709 BC037198	73447	+	M19715|TPM1|7168|tropomyosin 1 (alpha)##L02923|TPM1|7168|tropomyosin 1 (alpha)##M19714|TPM1|7168|tropomyosin 1 (alpha)##AB209041|TPM1|7168|tropomyosin 1 (alpha)##NM_001018008|TPM1|7168|tropomyosin 1 (alpha)##BC053545|TPM1|7168|tropomyosin 1 (alpha)##BC050473|TPM1|7168|tropomyosin 1 (alpha)##AK301319|TPM1|7168|tropomyosin 1 (alpha)##AK298625|TPM1|7168|tropomyosin 1 (alpha)##DQ424903|TPM1|7168|tropomyosin 1 (alpha)##EU832801|TPM1|7168|tropomyosin 1 (alpha)##GQ129381|TPM1|7168|tropomyosin 1 (alpha)##L02922|TPM1|7168|tropomyosin 1 (alpha)##AF474156|TPM1|7168|tropomyosin 1 (alpha)##NM_032857|LACTB|114294|lactamase, beta##NM_171846|LACTB|114294|lactamase, beta##BC067288|LACTB|114294|lactamase, beta##AK027808|LACTB|114294|lactamase, beta##AY358709|LACTB|114294|lactamase, beta##BC037198|LACTB|114294|lactamase, beta	0.031602	
chr19	18415686	18415866	reg1029942.p1	4.474	+	TSC_hg19_v1_chr19_-_18392451 X56681	-23308	-	TSC_hg19_v1_chr19_-_18392431 BC052571 AK223630 NM_005354	-23352	-	BC169273 TSC_hg19_v1_chr19_-_18392160 X51346	-23671	-	TSC_hg19_v1_chr19_-_18433887 AJ238096 AF251218 BC023665 AF182290 BC003652 BC022198 BC000387	18111	-	TSC_hg19_v1_chr19_-_18433953 AF117235 NM_001252129 NM_012321	18190	-	TSC_hg19_v1_chr19_+_18451449 AK289968 NM_017712 AK294497 BC042138 BC028063 AJ278828 AK000215	35631	+	X56681|JUND|3727|jun D proto-oncogene##AK223630|JUND|3727|jun D proto-oncogene##NM_005354|JUND|3727|jun D proto-oncogene##BC169273|JUND|3727|jun D proto-oncogene##X51346|JUND|3727|jun D proto-oncogene##AJ238096|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF251218|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC023665|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182290|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC003652|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC022198|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC000387|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF117235|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001252129|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012321|LSM4|25804|LSM4 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK289968|PGPEP1|54858|pyroglutamyl-peptidase I##NM_017712|PGPEP1|54858|pyroglutamyl-peptidase I##AK294497|PGPEP1|54858|pyroglutamyl-peptidase I##BC042138|PGPEP1|54858|pyroglutamyl-peptidase I##BC028063|PGPEP1|54858|pyroglutamyl-peptidase I##AJ278828|PGPEP1|54858|pyroglutamyl-peptidase I##AK000215|PGPEP1|54858|pyroglutamyl-peptidase I	0.0	
chr20	56754535	56754715	reg1008269.p1	4.474	+	NM_178456 BC035405	-28638	+	NM_199171	-468085	-	TSC_hg19_v1_chr20_-_56285634 BC080635 AF224278 AY128643 NM_199169 NM_199170 AX775887 AK296199	-469003	-	AK299330 AK057583 BC100979 BC100980 TSC_hg19_v1_chr20_-_56884511	129874	-	TSC_hg19_v1_chr20_+_56884770 NM_020673 BC063457 AF091034 AJ276210	130157	+	TSC_hg19_v1_chr20_+_56884847 BC015710	130219	+	NM_178456|C20orf85|128602|chromosome 20 open reading frame 85##BC035405|C20orf85|128602|chromosome 20 open reading frame 85##NM_199171|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##BC080635|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AF224278|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AY128643|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199169|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199170|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK296199|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK299330|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##AK057583|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100979|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##BC100980|PPP4R1L|55370|protein phosphatase 4, regulatory subunit 1-like##NM_020673|RAB22A|57403|RAB22A, member RAS oncogene family##BC063457|RAB22A|57403|RAB22A, member RAS oncogene family##AF091034|RAB22A|57403|RAB22A, member RAS oncogene family##AJ276210|RAB22A|57403|RAB22A, member RAS oncogene family##BC015710|RAB22A|57403|RAB22A, member RAS oncogene family	0.0	
chr9	1930449	1930629	reg1031292.p2	4.474	+	AF130729 NM_181872	-879930	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-880169	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-880195	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	84757	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	691268	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	691535	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.0	
chr11	7533848	7534028	reg1010311.p1	4.473	+	NM_198474 BX647908 BC092488 TSC_hg19_v1_chr11_+_7506763 AK298137 BC035895 AK297778	-27221	+	AK055003 AB527847 CU692338 TSC_hg19_v1_chr11_+_7273475	-260501	+	TSC_hg19_v1_chr11_+_7273164 BC046367 NM_175733 AK315013	-260745	+	NM_003621 BC021714 TSC_hg19_v1_chr11_+_7535171	1165	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	1305	+	AK296718 TSC_hg19_v1_chr11_+_7618421	84480	+	NM_198474|OLFML1|283298|olfactomedin-like 1##BX647908|OLFML1|283298|olfactomedin-like 1##BC092488|OLFML1|283298|olfactomedin-like 1##AK298137|OLFML1|283298|olfactomedin-like 1##BC035895|OLFML1|283298|olfactomedin-like 1##AK297778|OLFML1|283298|olfactomedin-like 1##AK055003|SYT9|143425|synaptotagmin IX##BC046367|SYT9|143425|synaptotagmin IX##NM_175733|SYT9|143425|synaptotagmin IX##AK315013|SYT9|143425|synaptotagmin IX##NM_003621|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##BC021714|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)	0.019858	
chr1	244613974	244614155	reg1027015.p1	4.473	+	BC054479 NM_001012970	-98128	+	TSC_hg19_v1_chr1_+_244217286 AK310634	-396769	+	BC078175 AJ001388 NM_006352	-397521	+	CU680302 EU831433 EU831525 TSC_hg19_v1_chr1_-_244615212 AK025514 AK303886 BC012356	1112	-	TSC_hg19_v1_chr1_-_244615392 AK308749 NM_001126	1274	-	NM_001130957 NM_001242340 NM_173807 TSC_hg19_v1_chr1_+_244624690 BC032859 BC028392 AK303059 BX648685 AK302609 DQ891006 EU176575 CU689566	10637	+	BC054479|C1orf100|200159|chromosome 1 open reading frame 100##NM_001012970|C1orf100|200159|chromosome 1 open reading frame 100##BC078175|ZNF238|10472|zinc finger protein 238##AJ001388|ZNF238|10472|zinc finger protein 238##NM_006352|ZNF238|10472|zinc finger protein 238##EU831433|ADSS|159|adenylosuccinate synthase##EU831525|ADSS|159|adenylosuccinate synthase##AK025514|ADSS|159|adenylosuccinate synthase##AK303886|ADSS|159|adenylosuccinate synthase##BC012356|ADSS|159|adenylosuccinate synthase##AK308749|ADSS|159|adenylosuccinate synthase##NM_001126|ADSS|159|adenylosuccinate synthase##NM_001130957|C1orf101|257044|chromosome 1 open reading frame 101##NM_001242340|C1orf101|257044|chromosome 1 open reading frame 101##NM_173807|C1orf101|257044|chromosome 1 open reading frame 101##BC032859|C1orf101|257044|chromosome 1 open reading frame 101##BC028392|C1orf101|257044|chromosome 1 open reading frame 101##AK303059|C1orf101|257044|chromosome 1 open reading frame 101##BX648685|C1orf101|257044|chromosome 1 open reading frame 101##AK302609|C1orf101|257044|chromosome 1 open reading frame 101##DQ891006|C1orf101|257044|chromosome 1 open reading frame 101##EU176575|C1orf101|257044|chromosome 1 open reading frame 101	0.0	
chr17	79265329	79265450	reg1034542.p2	4.473	+	BC141912 BC127837 NM_001086521 TSC_hg19_v1_chr17_+_79213151 BC079831	-52255	+	TSC_hg19_v1_chr17_-_79212892 NM_144679	-52500	-	TSC_hg19_v1_chr17_-_79212861 AK128728 BC064483 BC042155 AK056090	-52566	-	TSC_hg19_v1_chr17_-_79269071 BC014642	3677	-	TSC_hg19_v1_chr17_-_79269100 NM_001037984 NM_138570	3704	-	AK096111 NM_178520	39084	-	BC127837|C17orf89|284184|chromosome 17 open reading frame 89##NM_001086521|C17orf89|284184|chromosome 17 open reading frame 89##BC079831|C17orf89|284184|chromosome 17 open reading frame 89##NM_144679|C17orf56|146705|chromosome 17 open reading frame 56##AK128728|C17orf56|146705|chromosome 17 open reading frame 56##BC064483|C17orf56|146705|chromosome 17 open reading frame 56##BC042155|C17orf56|146705|chromosome 17 open reading frame 56##AK056090|C17orf56|146705|chromosome 17 open reading frame 56##BC014642|SLC38A10|124565|solute carrier family 38, member 10##NM_001037984|SLC38A10|124565|solute carrier family 38, member 10##NM_138570|SLC38A10|124565|solute carrier family 38, member 10##AK096111|TMEM105|284186|transmembrane protein 105##NM_178520|TMEM105|284186|transmembrane protein 105	0.0	
chr21	15825797	15825920	reg1031046.p2	4.473	+	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-70385	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-237361	+	AB463838 AY197607 NM_198996	-246610	-	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	92791	-	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	611359	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	1276467	+	AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AY197607|LIPI|149998|lipase, member I##NM_198996|LIPI|149998|lipase, member I##BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25	0.0	
chr4	140089097	140089240	reg1031839.p2	4.473	+	U43188 NM_201999	-28565	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	-83557	-	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	-83765	-	TSC_hg19_v1_chr4_-_140098351 AK311505	9169	-	BC037987 BC104173 BC104174 AF329088 AF484960 NM_032623	112247	-	CR457005 AF047184 TSC_hg19_v1_chr4_-_140216970 AF047435 AK291147 BC101798 BC112061	127805	-	U43188|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_201999|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC037987|C4orf49|84709|chromosome 4 open reading frame 49##BC104173|C4orf49|84709|chromosome 4 open reading frame 49##BC104174|C4orf49|84709|chromosome 4 open reading frame 49##AF329088|C4orf49|84709|chromosome 4 open reading frame 49##AF484960|C4orf49|84709|chromosome 4 open reading frame 49##NM_032623|C4orf49|84709|chromosome 4 open reading frame 49##CR457005|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF047184|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF047435|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AK291147|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC101798|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC112061|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa	0.019732	
chr5	100164400	100164581	reg1026029.p4	4.473	+	AF529367 TSC_hg19_v1_chr5_+_99871306	-293220	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-293417	+	BC054860 BC117134 NM_001270 AF006513	-1902262	-	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	74438	-	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	1467618	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	1670143	-	AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1	0.0	
chrX	105641129	105641234	reg1031216.p1	4.473	+	BC031229 NM_001171020 NM_152423	-228884	+	TSC_hg19_v1_chrX_-_105282719 AK310778 NM_000354	-358452	-	TSC_hg19_v1_chrX_+_105066559 AK131549	-574615	+	NM_001184782 NM_018015 TSC_hg19_v1_chrX_+_105855208 BC047503 AK001040 BC070110 AK291730 BC011483 BC033709 BC054032 CU687040 CU689708	214053	+	BC036901 NM_024539 AK126553	295894	+	TSC_hg19_v1_chrX_+_105969932 AK074264 NM_194463 BC063404 AF394689 CU687692	328827	+	BC031229|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_001171020|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_152423|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##AK131549|NRK|203447|Nik related kinase##NM_001184782|CXorf57|55086|chromosome X open reading frame 57##NM_018015|CXorf57|55086|chromosome X open reading frame 57##BC047503|CXorf57|55086|chromosome X open reading frame 57##AK001040|CXorf57|55086|chromosome X open reading frame 57##BC070110|CXorf57|55086|chromosome X open reading frame 57##AK291730|CXorf57|55086|chromosome X open reading frame 57##BC011483|CXorf57|55086|chromosome X open reading frame 57##BC033709|CXorf57|55086|chromosome X open reading frame 57##BC054032|CXorf57|55086|chromosome X open reading frame 57##BC036901|RNF128|79589|ring finger protein 128##NM_024539|RNF128|79589|ring finger protein 128##AK126553|RNF128|79589|ring finger protein 128##AK074264|RNF128|79589|ring finger protein 128##NM_194463|RNF128|79589|ring finger protein 128##BC063404|RNF128|79589|ring finger protein 128##AF394689|RNF128|79589|ring finger protein 128	0.39498	CTCF.p2:29:0.395
chr17	39844369	39844469	reg1029055.p2	4.472	+	AB528302 DQ891101 DQ894283 BC072018 BC072019 BC011901 X62571 BC000159 BC056421 AK304373 AK095342 NM_000422	-63598	-	S79867 DQ891307 DQ896818 AF061812 BC039169 AK290853 AK309296 AK309278 NM_005557	-75411	-	BT007186 AB527765 DQ890733 DQ892997 DQ893905 BC042437 BC002690 BC019097 BC094830 AK309280 NM_000526	-101304	-	NM_005801 TSC_hg19_v1_chr17_+_39845138 AL050005 AK311862	714	+	AK311209 TSC_hg19_v1_chr17_+_39845141	722	+	TSC_hg19_v1_chr17_+_39845142 BC005118 L26247 AF083441 BC008710 AF100737 AJ012375 DQ896700 EU176404 BT006645 CR457051	797	+	DQ891101|KRT17|3872|keratin 17##DQ894283|KRT17|3872|keratin 17##BC072018|KRT17|3872|keratin 17##BC072019|KRT17|3872|keratin 17##BC011901|KRT17|3872|keratin 17##X62571|KRT17|3872|keratin 17##BC000159|KRT17|3872|keratin 17##BC056421|KRT17|3872|keratin 17##AK304373|KRT17|3872|keratin 17##AK095342|KRT17|3872|keratin 17##NM_000422|KRT17|3872|keratin 17##S79867|KRT16|3868|keratin 16##DQ891307|KRT16|3868|keratin 16##DQ896818|KRT16|3868|keratin 16##AF061812|KRT16|3868|keratin 16##BC039169|KRT16|3868|keratin 16##AK290853|KRT16|3868|keratin 16##NM_005557|KRT16|3868|keratin 16##BT007186|KRT14|3861|keratin 14##DQ890733|KRT14|3861|keratin 14##DQ892997|KRT14|3861|keratin 14##DQ893905|KRT14|3861|keratin 14##BC042437|KRT14|3861|keratin 14##BC002690|KRT14|3861|keratin 14##BC019097|KRT14|3861|keratin 14##BC094830|KRT14|3861|keratin 14##NM_000526|KRT14|3861|keratin 14##NM_005801|EIF1|10209|eukaryotic translation initiation factor 1##AL050005|EIF1|10209|eukaryotic translation initiation factor 1##AK311862|EIF1|10209|eukaryotic translation initiation factor 1##AK311209|EIF1|10209|eukaryotic translation initiation factor 1##BC005118|EIF1|10209|eukaryotic translation initiation factor 1##L26247|EIF1|10209|eukaryotic translation initiation factor 1##AF083441|EIF1|10209|eukaryotic translation initiation factor 1##BC008710|EIF1|10209|eukaryotic translation initiation factor 1##AF100737|EIF1|10209|eukaryotic translation initiation factor 1##AJ012375|EIF1|10209|eukaryotic translation initiation factor 1##DQ896700|EIF1|10209|eukaryotic translation initiation factor 1##EU176404|EIF1|10209|eukaryotic translation initiation factor 1##BT006645|EIF1|10209|eukaryotic translation initiation factor 1##CR457051|EIF1|10209|eukaryotic translation initiation factor 1	0.445184	CTCF.p2:-1:0.445
chr3	182877277	182877457	reg1031968.p3	4.472	+	BC036395 TSC_hg19_v1_chr3_-_182833987	-43444	-	AK295293 TSC_hg19_v1_chr3_-_182817343 AK023051 AB029826 AF310339 BC004187 BC004214 AF310972 NM_020166	-60017	-	AB587379 CU678606 TSC_hg19_v1_chr3_-_182817309 CR749608 AK316428 AB209737 AL442091 AK294882	-60086	-	TSC_hg19_v1_chr3_-_182880435 DQ892118	3072	-	TSC_hg19_v1_chr3_-_182880523 AB013924 AK313172 BC032940 NM_014398	3197	-	TSC_hg19_v1_chr3_+_182970969 NM_032047 AK074424	93581	+	BC036395|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK295293|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK023051|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AB029826|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AF310339|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##BC004187|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##BC004214|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AF310972|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##NM_020166|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##CR749608|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK316428|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AB209737|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AL442091|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##AK294882|MCCC1|56922|methylcrotonoyl-CoA carboxylase 1 (alpha)##DQ892118|LAMP3|27074|lysosomal-associated membrane protein 3##AB013924|LAMP3|27074|lysosomal-associated membrane protein 3##AK313172|LAMP3|27074|lysosomal-associated membrane protein 3##BC032940|LAMP3|27074|lysosomal-associated membrane protein 3##NM_014398|LAMP3|27074|lysosomal-associated membrane protein 3##NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5	0.222364	CTCF.p2:19:0.222
chr6	12013395	12013530	reg1030285.p1	4.472	+	NM_002114	-739	+	NM_001143948 NM_032744	-234183	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-474964	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	277131	+	TSC_hg19_v1_chr6_+_12514301 D28417	500840	+	AK295263 TSC_hg19_v1_chr6_+_12716998	703481	+	NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1	0.0	
chrX	15930353	15930533	reg1033163.p2	4.472	+	TSC_hg19_v1_chrX_-_15873104 NM_003916	-57340	-	AK130075 TSC_hg19_v1_chrX_-_15872938	-57505	-	TSC_hg19_v1_chrX_-_15872937 AK296135 AK299921 AK312594	-57514	-	NM_005314	210980	+	L13220 NM_004057 X65869 BC112174	737854	+	AK125332 NM_001144002	799896	-	NM_003916|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##NM_005314|GRPR|2925|gastrin-releasing peptide receptor##L13220|S100G|795|S100 calcium binding protein G##NM_004057|S100G|795|S100 calcium binding protein G##X65869|S100G|795|S100 calcium binding protein G##BC112174|S100G|795|S100 calcium binding protein G##AK125332|CTPS2|56474|CTP synthase II##NM_001144002|CTPS2|56474|CTP synthase II	0.0	
chr10	11199783	11199879	reg1029533.p2	4.471	+	U69546 TSC_hg19_v1_chr10_+_11060121	-139715	+	AF090694 TSC_hg19_v1_chr10_+_11060072	-139760	+	TSC_hg19_v1_chr10_+_11059882 AK314087 NM_006561 BC036391	-139941	+	AK299983 NM_001025076 NM_001083591 TSC_hg19_v1_chr10_+_11207008	7138	+	AK297313 TSC_hg19_v1_chr10_+_11207057 AK299992 AF036956 AK293164 AF432906	7265	+	TSC_hg19_v1_chr10_+_11207244 AK316354	7414	+	U69546|CELF2|10659|CUGBP, Elav-like family member 2##AF090694|CELF2|10659|CUGBP, Elav-like family member 2##AK314087|CELF2|10659|CUGBP, Elav-like family member 2##NM_006561|CELF2|10659|CUGBP, Elav-like family member 2##BC036391|CELF2|10659|CUGBP, Elav-like family member 2##AK299983|CELF2|10659|CUGBP, Elav-like family member 2##NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2##NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2##AK297313|CELF2|10659|CUGBP, Elav-like family member 2##AK299992|CELF2|10659|CUGBP, Elav-like family member 2##AF036956|CELF2|10659|CUGBP, Elav-like family member 2##AK293164|CELF2|10659|CUGBP, Elav-like family member 2##AF432906|CELF2|10659|CUGBP, Elav-like family member 2##AK316354|CELF2|10659|CUGBP, Elav-like family member 2	0.0	
chr17	16190429	16190584	reg1033080.p1	4.471	+	TSC_hg19_v1_chr17_+_16120523 NM_004278 AK292932 AK302523 AK296120 BC068197 AB017165 CU686621	-70000	+	BC056862 BC035748 BC142648 BC026028 AK307614 TSC_hg19_v1_chr17_-_16118849 AF044209 BC050594 BC068996 BC058511 BC107772 NM_006311	-71666	-	AB385422 AB028970 BC167431 NM_001190438 NM_001190440 AF087856 AF303586	-92588	-	TSC_hg19_v1_chr17_-_16256747 AF514992 NM_181716 BC052604	66256	-	TSC_hg19_v1_chr17_-_16256824 BC137486 BC137487	66327	-	TSC_hg19_v1_chr17_+_16284371 BC000379 NM_018955	93858	+	NM_004278|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK292932|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK302523|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK296120|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##BC068197|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AB017165|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##BC056862|NCOR1|9611|nuclear receptor corepressor 1##BC035748|NCOR1|9611|nuclear receptor corepressor 1##BC142648|NCOR1|9611|nuclear receptor corepressor 1##BC026028|NCOR1|9611|nuclear receptor corepressor 1##AK307614|NCOR1|9611|nuclear receptor corepressor 1##AF044209|NCOR1|9611|nuclear receptor corepressor 1##BC050594|NCOR1|9611|nuclear receptor corepressor 1##BC068996|NCOR1|9611|nuclear receptor corepressor 1##BC058511|NCOR1|9611|nuclear receptor corepressor 1##BC107772|NCOR1|9611|nuclear receptor corepressor 1##NM_006311|NCOR1|9611|nuclear receptor corepressor 1##AB028970|NCOR1|9611|nuclear receptor corepressor 1##BC167431|NCOR1|9611|nuclear receptor corepressor 1##NM_001190438|NCOR1|9611|nuclear receptor corepressor 1##NM_001190440|NCOR1|9611|nuclear receptor corepressor 1##AF087856|NCOR1|9611|nuclear receptor corepressor 1##AF303586|NCOR1|9611|nuclear receptor corepressor 1##AF514992|CENPV|201161|centromere protein V##NM_181716|CENPV|201161|centromere protein V##BC052604|CENPV|201161|centromere protein V##BC137486|CENPV|201161|centromere protein V##BC137487|CENPV|201161|centromere protein V##BC000379|UBB|7314|ubiquitin B##NM_018955|UBB|7314|ubiquitin B	0.018644	
chr19	12662558	12662704	reg1034118.p2	4.471	+	BC136728 BC136729 TSC_hg19_v1_chr19_-_12662297 BC065023 AK095600 BC028367 AK092760 AX747711 BX647959 NM_144976	-358	-	TSC_hg19_v1_chr19_-_12595631 NM_152601	-67003	-	BC136746 BC136751 AK290911 TSC_hg19_v1_chr19_-_12595603 BC036481	-67055	-	AB385437 CU691590 EU446833 BC038586 AB033024 NM_020714 TSC_hg19_v1_chr19_-_12721628	58930	-	AK307775 NM_153358 AK298597 TSC_hg19_v1_chr19_+_12721749 AX721060 AK074877 AK297715 BC106937 BC106938	59133	+	TSC_hg19_v1_chr19_-_12777530 U68382 U68567 AB209921 DQ891878 DQ895066 AB527181 U60266 BC000736	114881	-	BC136728|ZNF564|163050|zinc finger protein 564##BC136729|ZNF564|163050|zinc finger protein 564##BC065023|ZNF564|163050|zinc finger protein 564##BC028367|ZNF564|163050|zinc finger protein 564##AK092760|ZNF564|163050|zinc finger protein 564##BX647959|ZNF564|163050|zinc finger protein 564##NM_144976|ZNF564|163050|zinc finger protein 564##NM_152601|ZNF709|163051|zinc finger protein 709##BC136746|ZNF709|163051|zinc finger protein 709##BC136751|ZNF709|163051|zinc finger protein 709##AK290911|ZNF709|163051|zinc finger protein 709##BC036481|ZNF709|163051|zinc finger protein 709##EU446833|ZNF490|57474|zinc finger protein 490##BC038586|ZNF490|57474|zinc finger protein 490##AB033024|ZNF490|57474|zinc finger protein 490##NM_020714|ZNF490|57474|zinc finger protein 490##AK307775|ZNF791|163049|zinc finger protein 791##NM_153358|ZNF791|163049|zinc finger protein 791##AK298597|ZNF791|163049|zinc finger protein 791##AK074877|ZNF791|163049|zinc finger protein 791##AK297715|ZNF791|163049|zinc finger protein 791##BC106937|ZNF791|163049|zinc finger protein 791##BC106938|ZNF791|163049|zinc finger protein 791##U68382|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##U68567|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##AB209921|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##DQ891878|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##DQ895066|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##U60266|MAN2B1|4125|mannosidase, alpha, class 2B, member 1##BC000736|MAN2B1|4125|mannosidase, alpha, class 2B, member 1	0.031856	
chr19	48423502	48423602	reg1030850.p2	4.471	+	BC020755 TSC_hg19_v1_chr19_-_48389573 L02337 S43859 AK313415 AK289380 NM_003167	-33940	-	CU676700 DQ891165 DQ894346 U08024 L20000 X70222 TSC_hg19_v1_chr19_-_48389554 X84816 U08025	-34014	-	NM_000554 DQ426868 BC016664 DQ426867 BC053672	-98397	+	AB590993 DQ227497 NM_001128326	71830	-	AF279147 NM_022142 BC015598	74373	+	HQ258076 BC126133 BC126135 AF169159 NM_019855	123693	-	BC020755|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L02337|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##S43859|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##AK313415|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##AK289380|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##NM_003167|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ891165|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ894346|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08024|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L20000|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X70222|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X84816|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08025|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##NM_000554|CRX|1406|cone-rod homeobox##DQ426868|CRX|1406|cone-rod homeobox##BC016664|CRX|1406|cone-rod homeobox##DQ426867|CRX|1406|cone-rod homeobox##BC053672|CRX|1406|cone-rod homeobox##DQ227497|BSPH1|100131137|binder of sperm protein homolog 1##NM_001128326|BSPH1|100131137|binder of sperm protein homolog 1##AF279147|ELSPBP1|64100|epididymal sperm binding protein 1##NM_022142|ELSPBP1|64100|epididymal sperm binding protein 1##BC015598|ELSPBP1|64100|epididymal sperm binding protein 1##HQ258076|CABP5|56344|calcium binding protein 5##BC126133|CABP5|56344|calcium binding protein 5##BC126135|CABP5|56344|calcium binding protein 5##AF169159|CABP5|56344|calcium binding protein 5##NM_019855|CABP5|56344|calcium binding protein 5	0.820322	CTCF.p2:-2:0.820
chr5	131992198	131992313	reg1029375.p1	4.471	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-99615	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	-113063	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	-165774	-	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	1635	+	NM_000589 NM_172348	17117	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	80962	-	NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A	0.0	
chr5	176245788	176245858	reg1031263.p1	4.471	+	TSC_hg19_v1_chr5_+_176237521 AK131380 NM_133369 BC157824	-8268	+	TSC_hg19_v1_chr5_+_176074497 AK024427 BC067105 BC010405 AF174603 CU679699 CU688248	-171271	+	NM_001006616 NM_012171 NM_130465 TSC_hg19_v1_chr5_+_176074470 AY037146	-171393	+	U51333 BC028129 NM_002115	80500	-	AK304794 BX537376 NM_016290 AK023044 BC032561 BC006078 BC014069 AF349313 NM_001199297 NM_001199298 TSC_hg19_v1_chr5_-_176433806	187765	-	AK297448 AK297584 NM_012279 TSC_hg19_v1_chr5_+_176449708 AK295549 AF083340 AK026627 AK300065 BC007775 AL359576 CR749692 AK131469 AK300738 AB463365 AM392799 AM393768	203896	+	AK131380|UNC5A|90249|unc-5 homolog A (C. elegans)##NM_133369|UNC5A|90249|unc-5 homolog A (C. elegans)##BC157824|UNC5A|90249|unc-5 homolog A (C. elegans)##AK024427|TSPAN17|26262|tetraspanin 17##BC067105|TSPAN17|26262|tetraspanin 17##BC010405|TSPAN17|26262|tetraspanin 17##AF174603|TSPAN17|26262|tetraspanin 17##NM_001006616|TSPAN17|26262|tetraspanin 17##NM_012171|TSPAN17|26262|tetraspanin 17##NM_130465|TSPAN17|26262|tetraspanin 17##AY037146|TSPAN17|26262|tetraspanin 17##U51333|HK3|3101|hexokinase 3 (white cell)##BC028129|HK3|3101|hexokinase 3 (white cell)##NM_002115|HK3|3101|hexokinase 3 (white cell)##AK304794|UIMC1|51720|ubiquitin interaction motif containing 1##BX537376|UIMC1|51720|ubiquitin interaction motif containing 1##NM_016290|UIMC1|51720|ubiquitin interaction motif containing 1##AK023044|UIMC1|51720|ubiquitin interaction motif containing 1##BC032561|UIMC1|51720|ubiquitin interaction motif containing 1##BC006078|UIMC1|51720|ubiquitin interaction motif containing 1##AF349313|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199297|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199298|UIMC1|51720|ubiquitin interaction motif containing 1##AK297448|ZNF346|23567|zinc finger protein 346##NM_012279|ZNF346|23567|zinc finger protein 346##AK295549|ZNF346|23567|zinc finger protein 346##AF083340|ZNF346|23567|zinc finger protein 346##AK026627|ZNF346|23567|zinc finger protein 346##AK300065|ZNF346|23567|zinc finger protein 346##BC007775|ZNF346|23567|zinc finger protein 346##AL359576|ZNF346|23567|zinc finger protein 346##CR749692|ZNF346|23567|zinc finger protein 346##AK131469|ZNF346|23567|zinc finger protein 346##AK300738|ZNF346|23567|zinc finger protein 346##AM392799|ZNF346|23567|zinc finger protein 346##AM393768|ZNF346|23567|zinc finger protein 346	0.0	
chr6	43945176	43945300	reg1024847.p1	4.471	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-206368	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-206704	+	TSC_hg19_v1_chr6_+_43738284 AF022375	-206991	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	23136	+	CR627460 TSC_hg19_v1_chr6_+_44094741	149460	+	TSC_hg19_v1_chr6_-_44095161 AK312086	149922	-	M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##AF022375|VEGFA|7422|vascular endothelial growth factor A##BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14	0.0	
chr7	143515130	143515235	reg1030339.p1	4.471	+	BC110410 BC043153 NM_178561	-60376	-	NM_001130026 AK296318	-102232	+	BC113530 BC117233 NM_173678 AY167570 BC010225	-196640	+	AK299911 TSC_hg19_v1_chr7_-_143582416 NM_001206941	67232	-	TSC_hg19_v1_chr7_-_143599249 AB018281 NM_014719 BC000609 AK291605 AK001640 NM_001206938	84083	-	BC136812 BC136813 NM_001004685	117109	+	BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_178561|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_001130026|FAM115C|285966|family with sequence similarity 115, member C##AK296318|FAM115C|285966|family with sequence similarity 115, member C##BC113530|FAM115C|285966|family with sequence similarity 115, member C##BC117233|FAM115C|285966|family with sequence similarity 115, member C##NM_173678|FAM115C|285966|family with sequence similarity 115, member C##AY167570|FAM115C|285966|family with sequence similarity 115, member C##BC010225|LOC154761|154761|uncharacterized LOC154761##AK299911|FAM115A|9747|family with sequence similarity 115, member A##NM_001206941|FAM115A|9747|family with sequence similarity 115, member A##AB018281|FAM115A|9747|family with sequence similarity 115, member A##NM_014719|FAM115A|9747|family with sequence similarity 115, member A##BC000609|FAM115A|9747|family with sequence similarity 115, member A##AK291605|FAM115A|9747|family with sequence similarity 115, member A##AK001640|FAM115A|9747|family with sequence similarity 115, member A##NM_001206938|FAM115A|9747|family with sequence similarity 115, member A##BC136812|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##BC136813|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##NM_001004685|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2	0.991667	CTCF.p2:1:0.992
chr9	130564745	130564868	reg1028108.p1	4.471	+	TSC_hg19_v1_chr9_+_130548375 L25676 BC001968 AK313828 AB590139 DQ891182 DQ894364 DQ894365 AB451289 AB451421 BT019903	-16414	+	TSC_hg19_v1_chr9_+_130548326 X80230	-16471	+	NM_001261 TSC_hg19_v1_chr9_+_130548312	-16498	+	TSC_hg19_v1_chr9_+_130565171 NM_004957 AK315523 AK295309 BC064393 BC009901 BT006639 BC007121 M98045	430	+	TSC_hg19_v1_chr9_+_130565522 NM_001018078 AY007210	683	+	TSC_hg19_v1_chr9_+_130565577 AK056920	779	+	L25676|CDK9|1025|cyclin-dependent kinase 9##BC001968|CDK9|1025|cyclin-dependent kinase 9##AK313828|CDK9|1025|cyclin-dependent kinase 9##DQ891182|CDK9|1025|cyclin-dependent kinase 9##DQ894364|CDK9|1025|cyclin-dependent kinase 9##DQ894365|CDK9|1025|cyclin-dependent kinase 9##AB451289|CDK9|1025|cyclin-dependent kinase 9##AB451421|CDK9|1025|cyclin-dependent kinase 9##BT019903|CDK9|1025|cyclin-dependent kinase 9##X80230|CDK9|1025|cyclin-dependent kinase 9##NM_001261|CDK9|1025|cyclin-dependent kinase 9##NM_004957|FPGS|2356|folylpolyglutamate synthase##AK315523|FPGS|2356|folylpolyglutamate synthase##AK295309|FPGS|2356|folylpolyglutamate synthase##BC064393|FPGS|2356|folylpolyglutamate synthase##BC009901|FPGS|2356|folylpolyglutamate synthase##BT006639|FPGS|2356|folylpolyglutamate synthase##BC007121|FPGS|2356|folylpolyglutamate synthase##M98045|FPGS|2356|folylpolyglutamate synthase##NM_001018078|FPGS|2356|folylpolyglutamate synthase##AY007210|FPGS|2356|folylpolyglutamate synthase##AK056920|FPGS|2356|folylpolyglutamate synthase	0.439835	CTCF.p2:-1:0.440
chr10	44503776	44503853	reg1031935.p1	4.470	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-359508	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-359609	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-401917	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	376685	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	902904	+	AK056518 TSC_hg19_v1_chr10_-_45455156	951333	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.0	
chr19	49403379	49403560	reg1030042.p2	4.470	+	AK292066 NM_006184	-163	+	U82469 BC026070 NM_003323	-1503	-	DQ891855 EU176641 TSC_hg19_v1_chr19_+_49376488 AB464097 CR457259	-26980	+	TSC_hg19_v1_chr19_+_49403601 AK315422 BX647718 AK303126 AK222805 M96824	115	+	TSC_hg19_v1_chr19_+_49403608 BX647291	141	+	BC032730 NM_014475 DQ890882 DQ894036 CU689512 AB021933	33489	+	AK292066|NUCB1|4924|nucleobindin 1##NM_006184|NUCB1|4924|nucleobindin 1##U82469|TULP2|7288|tubby like protein 2##BC026070|TULP2|7288|tubby like protein 2##NM_003323|TULP2|7288|tubby like protein 2##DQ891855|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##EU176641|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##CR457259|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK315422|NUCB1|4924|nucleobindin 1##BX647718|NUCB1|4924|nucleobindin 1##AK303126|NUCB1|4924|nucleobindin 1##AK222805|NUCB1|4924|nucleobindin 1##M96824|NUCB1|4924|nucleobindin 1##BX647291|NUCB1|4924|nucleobindin 1##BC032730|DHDH|27294|dihydrodiol dehydrogenase (dimeric)##NM_014475|DHDH|27294|dihydrodiol dehydrogenase (dimeric)##DQ890882|DHDH|27294|dihydrodiol dehydrogenase (dimeric)##DQ894036|DHDH|27294|dihydrodiol dehydrogenase (dimeric)##AB021933|DHDH|27294|dihydrodiol dehydrogenase (dimeric)	0.0	
chr2	172378658	172378838	reg1025957.p1	4.470	+	TSC_hg19_v1_chr2_-_172374248 AB055776	-4502	-	TSC_hg19_v1_chr2_-_172291283 AK292108 NM_024770 AK297141	-87463	-	TSC_hg19_v1_chr2_+_172290837 BC140843 BC144653	-87840	+	AK301485 TSC_hg19_v1_chr2_+_172378762	11	+	TSC_hg19_v1_chr2_+_172379020 NM_001127383 NM_024843 AK128495 AK316588 AL136693 BC016900 AK291731 AK027115 AK225459 BC065290 HQ257890	207	+	TSC_hg19_v1_chr2_+_172543981 BX537412 AK055491 NM_001378 AK225759 BC091498 AY037160 AK308008 AK298561	165276	+	AK292108|METTL8|79828|methyltransferase like 8##NM_024770|METTL8|79828|methyltransferase like 8##AK297141|METTL8|79828|methyltransferase like 8##BC140843|DCAF17|80067|DDB1 and CUL4 associated factor 17##BC144653|DCAF17|80067|DDB1 and CUL4 associated factor 17##AK301485|CYBRD1|79901|cytochrome b reductase 1##NM_001127383|CYBRD1|79901|cytochrome b reductase 1##NM_024843|CYBRD1|79901|cytochrome b reductase 1##AK128495|CYBRD1|79901|cytochrome b reductase 1##AK316588|CYBRD1|79901|cytochrome b reductase 1##AL136693|CYBRD1|79901|cytochrome b reductase 1##BC016900|CYBRD1|79901|cytochrome b reductase 1##AK291731|CYBRD1|79901|cytochrome b reductase 1##AK027115|CYBRD1|79901|cytochrome b reductase 1##AK225459|CYBRD1|79901|cytochrome b reductase 1##BC065290|CYBRD1|79901|cytochrome b reductase 1##HQ257890|CYBRD1|79901|cytochrome b reductase 1##BX537412|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK055491|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##NM_001378|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK225759|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC091498|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AY037160|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK308008|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK298561|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2	0.0	
chr4	159093759	159093887	reg1028438.p1	4.470	+	NM_016613	-106	-	TSC_hg19_v1_chr4_-_159093526 AL832589	-291	-	AL834177 AB527363 AM392540 AM392704 TSC_hg19_v1_chr4_-_159092534	-1302	-	AY358785 AK172805 BC043193 NM_001031700 NM_001128424	359	-	NM_018342	37577	+	BC036551 BC048117 BC054487 TSC_hg19_v1_chr4_+_159131677 BC060875 BC035811 BC026318	37851	+	NM_016613|FAM198B|51313|family with sequence similarity 198, member B##AL832589|FAM198B|51313|family with sequence similarity 198, member B##AL834177|FAM198B|51313|family with sequence similarity 198, member B##AM392540|FAM198B|51313|family with sequence similarity 198, member B##AM392704|FAM198B|51313|family with sequence similarity 198, member B##AY358785|FAM198B|51313|family with sequence similarity 198, member B##AK172805|FAM198B|51313|family with sequence similarity 198, member B##BC043193|FAM198B|51313|family with sequence similarity 198, member B##NM_001031700|FAM198B|51313|family with sequence similarity 198, member B##NM_001128424|FAM198B|51313|family with sequence similarity 198, member B##NM_018342|TMEM144|55314|transmembrane protein 144##BC036551|TMEM144|55314|transmembrane protein 144##BC048117|TMEM144|55314|transmembrane protein 144##BC054487|TMEM144|55314|transmembrane protein 144##BC060875|TMEM144|55314|transmembrane protein 144##BC035811|TMEM144|55314|transmembrane protein 144##BC026318|TMEM144|55314|transmembrane protein 144	0.417688	CTCF.p2:5:0.418
chr12	20295956	20296073	reg1030727.p1	4.469	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-702826	+	TSC_hg19_v1_chr12_+_19592783 AB209384	-703219	+	TSC_hg19_v1_chr12_+_19592425 AK131361 NM_001114176 NM_153207 AK126973 BC022220	-703495	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	226184	+	AK308317 NM_001244683	428783	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	552481	+	BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##AK131361|AEBP2|121536|AE binding protein 2##NM_001114176|AEBP2|121536|AE binding protein 2##NM_153207|AEBP2|121536|AE binding protein 2##AK126973|AEBP2|121536|AE binding protein 2##BC022220|AEBP2|121536|AE binding protein 2##BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	0.467271	CTCF.p2:39:0.467
chr17	3637718	3637811	reg1026322.p1	4.469	+	TSC_hg19_v1_chr17_+_3627210 AK310546 AK315247 BC036181 NM_031965 AK056691 AB039834 AF289865 BC050662 AK292715 BC016626 BC047457	-10548	+	TSC_hg19_v1_chr17_-_3627077 AF289864	-10662	-	AB209623 BC016917 AK307959 TSC_hg19_v1_chr17_-_3599535 BC008319 AK290889 NM_001204519 NM_001204520 NM_002561 NM_175080	-38172	-	HQ258689 TSC_hg19_v1_chr17_-_3704463	66689	-	TSC_hg19_v1_chr17_-_3704490 BC113436 BC117207 NM_002208	66747	-	TSC_hg19_v1_chr17_-_3749541 NM_001114118 NM_018553	111746	-	BC036181|GSG2|83903|germ cell associated 2 (haspin)##NM_031965|GSG2|83903|germ cell associated 2 (haspin)##AK056691|GSG2|83903|germ cell associated 2 (haspin)##AB039834|GSG2|83903|germ cell associated 2 (haspin)##AF289865|GSG2|83903|germ cell associated 2 (haspin)##BC050662|GSG2|83903|germ cell associated 2 (haspin)##AK292715|GSG2|83903|germ cell associated 2 (haspin)##BC016626|GSG2|83903|germ cell associated 2 (haspin)##BC047457|GSG2|83903|germ cell associated 2 (haspin)##AF289864|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##AB209623|P2RX5-TAX1BP3|100533970|P2RX5-TAX1BP3 readthrough##BC016917|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK307959|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC008319|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK290889|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204519|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204520|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_002561|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_175080|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##HQ258689|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC113436|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC117207|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_002208|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_001114118|C17orf85|55421|chromosome 17 open reading frame 85##NM_018553|C17orf85|55421|chromosome 17 open reading frame 85	0.0	
chr22	33863787	33863912	reg1033022.p1	4.469	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-409494	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-461123	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-666097	+	AJ007583 AB011181 NM_004737 NM_133642	452521	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1598300	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1789627	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr9	74243280	74243438	reg1032061.p1	4.469	+	AL136545 TSC_hg19_v1_chr9_-_74061901	-181476	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	-506823	-	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	-759399	-	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	140219	-	AF151825 TSC_hg19_v1_chr9_-_74525994	282566	-	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	282797	-	AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2##AF151825|FAM108B1|51104|family with sequence similarity 108, member B1##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1	0.842591	CTCF.p2:2:0.843
chr14	75774442	75774568	reg1001292.p2	4.468	+	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	-28923	+	TSC_hg19_v1_chr14_-_75643341 NM_006827	-131153	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	-131172	-	NM_001135047 TSC_hg19_v1_chr14_+_75894724	120136	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	120508	+	BC051303 NM_001135049	124331	+	NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##NM_006827|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2	0.0	
chr7	97642895	97642988	reg1026336.p1	4.468	+	TSC_hg19_v1_chr7_-_97619350 AB528806 NM_006188	-23559	-	TSC_hg19_v1_chr7_-_97601657 BC030024	-41281	-	BC062733 TSC_hg19_v1_chr7_-_97601645 BC029615	-41298	-	TSC_hg19_v1_chr7_+_97736173 AB029002 BC146773 NM_014916 BC131504 AB384558 AB590084 AY130988	93395	+	BC113394 BC113396 NM_177455 AB464465	198650	+	TSC_hg19_v1_chr7_-_97881512 AK292996 BC053591 NM_015395 AK057048	238558	-	NM_006188|OCM2|4951|oncomodulin 2##BC062733|MGC72080|389538|MGC72080 pseudogene##BC029615|MGC72080|389538|MGC72080 pseudogene##AB029002|LMTK2|22853|lemur tyrosine kinase 2##BC146773|LMTK2|22853|lemur tyrosine kinase 2##NM_014916|LMTK2|22853|lemur tyrosine kinase 2##BC131504|LMTK2|22853|lemur tyrosine kinase 2##AY130988|LMTK2|22853|lemur tyrosine kinase 2##BC113394|BHLHA15|168620|basic helix-loop-helix family, member a15##BC113396|BHLHA15|168620|basic helix-loop-helix family, member a15##NM_177455|BHLHA15|168620|basic helix-loop-helix family, member a15##AK292996|TECPR1|25851|tectonin beta-propeller repeat containing 1##BC053591|TECPR1|25851|tectonin beta-propeller repeat containing 1##NM_015395|TECPR1|25851|tectonin beta-propeller repeat containing 1##AK057048|TECPR1|25851|tectonin beta-propeller repeat containing 1	0.753338	CTCF.p2:18:0.753
chr1	111758842	111758958	reg1020449.p2	4.467	+	TSC_hg19_v1_chr1_-_111747005 AK026110	-11925	-	TSC_hg19_v1_chr1_-_111743297 AK301583	-15590	-	TSC_hg19_v1_chr1_-_111743272 BC004557 NM_024901	-15630	-	NM_001025197 NM_004000 U58514 U49835 BC011460 BT006767 DQ893705 CU679936	11416	+	NM_001025199 U58515 AK298466 AK223316	13492	+	AK290702 AB025008 AB025009 AY825504 NM_021797 AF290004 AY789444 NM_201653	74605	+	AK026110|DENND2D|79961|DENN/MADD domain containing 2D##AK301583|DENND2D|79961|DENN/MADD domain containing 2D##BC004557|DENND2D|79961|DENN/MADD domain containing 2D##NM_024901|DENND2D|79961|DENN/MADD domain containing 2D##NM_001025197|CHI3L2|1117|chitinase 3-like 2##NM_004000|CHI3L2|1117|chitinase 3-like 2##U58514|CHI3L2|1117|chitinase 3-like 2##U49835|CHI3L2|1117|chitinase 3-like 2##BC011460|CHI3L2|1117|chitinase 3-like 2##BT006767|CHI3L2|1117|chitinase 3-like 2##DQ893705|CHI3L2|1117|chitinase 3-like 2##NM_001025199|CHI3L2|1117|chitinase 3-like 2##U58515|CHI3L2|1117|chitinase 3-like 2##AK298466|CHI3L2|1117|chitinase 3-like 2##AK223316|CHI3L2|1117|chitinase 3-like 2##AK290702|CHIA|27159|chitinase, acidic##AB025008|CHIA|27159|chitinase, acidic##AB025009|CHIA|27159|chitinase, acidic##AY825504|CHIA|27159|chitinase, acidic##NM_021797|CHIA|27159|chitinase, acidic##AF290004|CHIA|27159|chitinase, acidic##AY789444|CHIA|27159|chitinase, acidic##NM_201653|CHIA|27159|chitinase, acidic	0.0	
chr11	128367109	128367239	reg1029758.p2	4.467	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1493869	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1496449	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1496514	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	24789	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	24960	-	BX640634 NM_001143820	90278	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.0	
chr11	74412512	74412602	reg1030437.p2	4.467	+	AK302677 AK316370 D26018 NM_006591 TSC_hg19_v1_chr11_+_74303654 BC092454 AK316301 BC108908 BC108909 BC032636 BC058840 BC041703 AB383722	-108894	+	TSC_hg19_v1_chr11_-_74204756 NM_001144869	-207807	-	CR936625 DQ192291 NM_005472	-233961	-	NM_015424 AK304519 AY358522 AY279090 AY279091	29648	-	BC142623 TSC_hg19_v1_chr11_-_74442472	29896	-	TSC_hg19_v1_chr11_+_74459915 AB082522 NM_001098638	47351	+	AK302677|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316370|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##D26018|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_006591|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC092454|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316301|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108908|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108909|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC032636|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC058840|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC041703|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_001144869|LIPT2|387787|lipoyl(octanoyl) transferase 2 (putative)##CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_015424|CHRDL2|25884|chordin-like 2##AK304519|CHRDL2|25884|chordin-like 2##AY358522|CHRDL2|25884|chordin-like 2##AY279090|CHRDL2|25884|chordin-like 2##AY279091|CHRDL2|25884|chordin-like 2##BC142623|CHRDL2|25884|chordin-like 2##AB082522|RNF169|254225|ring finger protein 169##NM_001098638|RNF169|254225|ring finger protein 169	0.028717	
chr16	20703147	20703231	reg1025063.p1	4.467	+	AB059429 BC125177 BC125178 NM_052956	-612	-	AB073604 AK129944 AK289416 AK309601 NM_001105069 NM_182617	-115530	-	NM_001010845 AK298359 AK055867 AK303774 AK096039 AK298434 BC125175 BC125176	-240288	+	BC000448 TSC_hg19_v1_chr16_-_20753141 AK000281 NM_017736	49968	-	NM_005622 NM_202000 TSC_hg19_v1_chr16_+_20775331 AK223139 AK290322 X80062	72155	+	AB590202 CU679731 DQ895001 DQ895002 TSC_hg19_v1_chr16_-_20817767	114570	-	AB059429|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##BC125177|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##BC125178|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##NM_052956|ACSM1|116285|acyl-CoA synthetase medium-chain family member 1##AB073604|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##AK129944|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##AK289416|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##AK309601|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##NM_001105069|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##NM_182617|ACSM2B|348158|acyl-CoA synthetase medium-chain family member 2B##NM_001010845|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK298359|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK055867|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK303774|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK096039|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##AK298434|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC125175|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC125176|ACSM2A|123876|acyl-CoA synthetase medium-chain family member 2A##BC000448|THUMPD1|55623|THUMP domain containing 1##AK000281|THUMPD1|55623|THUMP domain containing 1##NM_017736|THUMPD1|55623|THUMP domain containing 1##NM_005622|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##NM_202000|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##AK223139|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##AK290322|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##X80062|ACSM3|6296|acyl-CoA synthetase medium-chain family member 3##DQ895001|ERI2|112479|ERI1 exoribonuclease family member 2##DQ895002|ERI2|112479|ERI1 exoribonuclease family member 2	0.841186	CTCF.p2:-22:0.841
chr2	190331546	190331675	reg1022005.p1	4.467	+	TSC_hg19_v1_chr2_+_190306204 AK022607 AK290445 CR749440 AK022581 AK091546 AX747050	-25401	+	BC040567 NM_032168 TSC_hg19_v1_chr2_+_190306177	-25440	+	AB384824 J04478 Y14690 AB209045 BC086874 AK297936 TSC_hg19_v1_chr2_-_190044488 AK300146 M31365 NM_000393	-287143	-	AF171087 AF215636 AF226614 AF231121 AL136944 BC035893 TSC_hg19_v1_chr2_-_190445510 AK223236 AK292146 AK314827	113879	-	TSC_hg19_v1_chr2_-_190445522 DQ065759 NM_014585	113921	-	BC037733 TSC_hg19_v1_chr2_-_190445663	114032	-	AK022607|WDR75|84128|WD repeat domain 75##AK290445|WDR75|84128|WD repeat domain 75##CR749440|WDR75|84128|WD repeat domain 75##AK022581|WDR75|84128|WD repeat domain 75##AK091546|WDR75|84128|WD repeat domain 75##BC040567|WDR75|84128|WD repeat domain 75##NM_032168|WDR75|84128|WD repeat domain 75##J04478|COL5A2|1290|collagen, type V, alpha 2##Y14690|COL5A2|1290|collagen, type V, alpha 2##AB209045|COL5A2|1290|collagen, type V, alpha 2##BC086874|COL5A2|1290|collagen, type V, alpha 2##AK297936|COL5A2|1290|collagen, type V, alpha 2##AK300146|COL5A2|1290|collagen, type V, alpha 2##M31365|COL5A2|1290|collagen, type V, alpha 2##NM_000393|COL5A2|1290|collagen, type V, alpha 2##AF171087|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF215636|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF226614|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF231121|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AL136944|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##BC035893|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK223236|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK292146|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK314827|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##DQ065759|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##NM_014585|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##BC037733|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1	1.548341	CTCF.p2:2:0.587	CTCF.p2:-20:0.962
chr5	132010884	132011064	reg1033151.p2	4.467	+	NM_000589 NM_172348	-1602	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	-17084	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-118334	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	62243	-	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	72170	+	TSC_hg19_v1_chr5_-_132112954 BC140759 BC171779 AK057797 AF179995 AF440761 AF440762 D86957 NM_001098811 NM_001098812 NM_015146	102030	-	NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A##AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2##BC140759|SEPT8|23176|septin 8##BC171779|SEPT8|23176|septin 8##AK057797|SEPT8|23176|septin 8##AF179995|SEPT8|23176|septin 8##AF440761|SEPT8|23176|septin 8##AF440762|SEPT8|23176|septin 8##D86957|SEPT8|23176|septin 8##NM_001098811|SEPT8|23176|septin 8##NM_001098812|SEPT8|23176|septin 8##NM_015146|SEPT8|23176|septin 8	0.0	
chr6	143858589	143858700	reg1025001.p1	4.467	+	CU678350 AK296485 BC003060 AK075458 TSC_hg19_v1_chr6_-_143832841 AY358551 BC051268 AK315475 NM_032020	-25750	-	TSC_hg19_v1_chr6_+_143771941 NM_003630 BC014551 BC015506 AB035307 AK025644 AK300907 AJ001625 AJ131389 AY277600 CR542062 CU677325	-86644	+	TSC_hg19_v1_chr6_-_143771811 BC037955 NM_182503	-86815	-	NM_001100166 NM_014721 AK300221 AB014580 BC152416 BC150630	70718	+	TSC_hg19_v1_chr6_+_143999112 AK298263 NM_001100164 NM_001100165 CR749345 AK297799	140533	+	TSC_hg19_v1_chr6_+_144164476 AK095269 BC009855 NM_032860	305845	+	AK296485|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC003060|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK075458|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AY358551|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC051268|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK315475|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_032020|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_003630|PEX3|8504|peroxisomal biogenesis factor 3##BC014551|PEX3|8504|peroxisomal biogenesis factor 3##BC015506|PEX3|8504|peroxisomal biogenesis factor 3##AB035307|PEX3|8504|peroxisomal biogenesis factor 3##AK025644|PEX3|8504|peroxisomal biogenesis factor 3##AK300907|PEX3|8504|peroxisomal biogenesis factor 3##AJ001625|PEX3|8504|peroxisomal biogenesis factor 3##AJ131389|PEX3|8504|peroxisomal biogenesis factor 3##AY277600|PEX3|8504|peroxisomal biogenesis factor 3##CR542062|PEX3|8504|peroxisomal biogenesis factor 3##BC037955|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_182503|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_001100166|PHACTR2|9749|phosphatase and actin regulator 2##NM_014721|PHACTR2|9749|phosphatase and actin regulator 2##AK300221|PHACTR2|9749|phosphatase and actin regulator 2##AB014580|PHACTR2|9749|phosphatase and actin regulator 2##BC152416|PHACTR2|9749|phosphatase and actin regulator 2##BC150630|PHACTR2|9749|phosphatase and actin regulator 2##AK298263|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100164|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100165|PHACTR2|9749|phosphatase and actin regulator 2##CR749345|PHACTR2|9749|phosphatase and actin regulator 2##AK297799|PHACTR2|9749|phosphatase and actin regulator 2##BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)##NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)	0.0	
chr7	77650001	77650129	reg1033194.p1	4.467	+	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-180556	+	BC067742 TSC_hg19_v1_chr7_+_77428204 AL136883	-221855	+	TSC_hg19_v1_chr7_+_77428194 NM_001127358 NM_001127360 AK225854 AK090643 AX746556 AK308289	-221924	+	AB014605 BC150277 AK297353 AF038563 NM_012301	1432814	-	TSC_hg19_v1_chr7_+_79083303 AK311103	1433092	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	2114074	+	BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##BC067742|PHTF2|57157|putative homeodomain transcription factor 2##AL136883|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2##AK225854|PHTF2|57157|putative homeodomain transcription factor 2##AK090643|PHTF2|57157|putative homeodomain transcription factor 2##AK308289|PHTF2|57157|putative homeodomain transcription factor 2##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1	0.911123	CTCF.p2:-3:0.911
chr9	126370591	126370741	reg1032005.p2	4.467	+	NM_173689 AK123000 DQ426866 AY720432	-252173	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-339778	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	-339846	-	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	321645	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	403217	+	TSC_hg19_v1_chr9_+_126774046 BC034458	403405	+	NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC034458|LHX2|9355|LIM homeobox 2	0.0	
chr10	11558429	11558610	reg1000940.p3	4.466	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-351027	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-351073	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-351094	+	NM_001080491	15754	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	95117	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	225879	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.0	
chr12	113527354	113527514	reg1030203.p1	4.466	+	NM_004416 BC048216	-31744	+	TSC_hg19_v1_chr12_+_113416323 NM_001032731 NM_002535 NM_016817 BC010625 BC053870 BC023637 AK292906 BC069052 BC049215 AK292796 M87284 M87434 AB590925 CU690608	-111094	+	AF063613 TSC_hg19_v1_chr12_+_113376306	-151094	+	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	45978	-	AF086713 AB208935 AK294350 NM_001193520 NM_004658	46597	-	AK308987 NM_001144872	60170	+	NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)##BC048216|DTX1|1840|deltex homolog 1 (Drosophila)##NM_001032731|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_002535|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_016817|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC010625|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC053870|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC023637|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292906|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC069052|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC049215|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292796|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87284|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87434|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AF063613|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001144872|CCDC42B|387885|coiled-coil domain containing 42B	0.0	
chr12	11734449	11734571	reg1007303.p2	4.466	+	BC044827 NM_006248	-186019	-	BC044827 K03205 K03206 BC141917 K03204 NM_005039 NM_199353 NM_199354 AX772842	-225994	-	BC130386 BC035362 K03207 NM_002723 BC128191	-271150	-	TSC_hg19_v1_chr12_+_11802659 AK289441	68163	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	68264	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	68476	+	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2##BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##K03205|PRB1|5542|proline-rich protein BstNI subfamily 1##K03206|PRB1|5542|proline-rich protein BstNI subfamily 1##BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1##K03204|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1##BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4##BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4##K03207|PRB4|5545|proline-rich protein BstNI subfamily 4##NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4##BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4##AK289441|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6	0.0	
chr14	107239098	107239221	reg1008568.p3	4.466	+	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	-20161	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	-27858	-	JF810265 DQ454799 FJ840007 FJ840015 DQ454561 DQ454955 DQ454612 DQ454663 DQ454685 FJ840092 FJ840295 FJ873837 AJ008218 JF810272 JF810273 AY003862 AJ132562 Y08732 AF103327 EU099062 EU620029 GQ504979 HQ392897 AF103116 AF103087 AF103100 HM774925 JN110942 HM774229 FJ385350 GQ504960 HM774112 HM774402 HM774448 HM774462 HM774524 HM774766 HM775010 AF103135 HM774927 HM774932 HM774189 U00529 Y14940 AF103057 AF103351 EU146338 L03141 L03153 AF029328 AF485459 DQ431489 L03143 L03173 L03177 AF035801 AY423195 AY423198 AY423206 DQ431488 DQ431492 HM995020 DQ431490 GU570297 HM152513 HM994969 HM994972 HM994977 HM994978 HM994981 HM994982 HM994989 HM995522 HM995532 HM996141 HM996526 DQ187603 DQ187629 DQ322887 DQ322888 DQ322889 DQ322890 DQ322960 DQ840663 DQ840674 DQ840675 DQ840677 DQ840678 DQ840680 DQ840681 DQ840682 DQ840683 DQ840687 DQ840758 DQ840769 DQ840770 DQ840771 DQ840773 DQ840781 DQ840844 DQ840857 DQ840859 DQ840860 DQ840863 DQ840910 DQ840917 DQ840918 AF021973 AF048774 AF115122 AF151702 AF174111 AJ238039 AJ579199 AJ579279 AY866726 AY866767 DQ100754 DQ100773 DQ100787 DQ100849 DQ100977 DQ840729 DQ926055 DQ926218 DQ926255 DQ926308 EF177956 EF178021 GQ267831 U96395 X99352 Y17142 AB063699 AB063849 AB063916 AB067258 AB363156 AF021945 AF129753 AF471200 AF471528 AF471540 AF471541 AF471542 AF471546 AJ300788 AJ389185 AJ556647 AJ556667 AJ579161 AY554174 AY554177 AY554178 AY573190 AY640527 AY640562 AY846273 AY971106 D83679 DQ065693 DQ535269 DQ535318 DQ535335 DQ535453 DQ535464 DQ535482 DQ926153 DQ926492 EF178117 EF178127 EF178131 EU835555 FJ195515 FJ492899 FN563769 GU570345 GU570350 HQ378386 JF806284 U97244 X99353 L33033 Z11950 BC033178 TSC_hg19_v1_chr14_-_107199472	-39859	-	DQ205161 AY392971 AF085654 X58399 X58398 BC002792 TSC_hg19_v1_chr14_-_107259820	20561	-	None	None	None	None	None	None	Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC033178|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##X58399|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##X58398|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##BC002792|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)	2.001471	CTCF.p2:32:0.452	CTCF.p2:-45:0.999	CTCF.p2:52:0.538
chr18	10442572	10442705	reg1029646.p2	4.466	+	AF044670 TSC_hg19_v1_chr18_+_9914252 AF057358 AF086627 BT019618	-528376	+	TSC_hg19_v1_chr18_+_9914239 AK292948 AF154847	-528415	+	TSC_hg19_v1_chr18_+_9914032 BC002992	-528597	+	BC053324 TSC_hg19_v1_chr18_+_10454599	11932	+	TSC_hg19_v1_chr18_+_10454623 AB056722 AB104887 NM_153000	11984	+	TSC_hg19_v1_chr18_+_10454634 AK300743	12014	+	AF044670|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AF057358|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AF086627|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##BT019618|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AK292948|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AF154847|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##BC002992|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##BC053324|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AB056722|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AB104887|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##NM_153000|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AK300743|APCDD1|147495|adenomatosis polyposis coli down-regulated 1	0.0	
chr2	135746711	135746891	reg1032378.p1	4.466	+	TSC_hg19_v1_chr2_+_135676409 AF048732	-70382	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	-70404	+	AK125008 NM_138326 BC016018 BC107420 AB071418	-150583	+	BC137276 BC137277 BC144555 AY574901 AY574902 AY574903 AY574904 AY574905 NM_001018046 NM_025052	35445	-	NM_001172435 NM_012233 TSC_hg19_v1_chr2_+_135809861 AK022494 BC146809 BC071602 D31886 AB385272 AB449877 BC030992	63115	+	AK095362 BC089429 NM_032143	541985	-	AF048732|CCNT2|905|cyclin T2##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC137276|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##BC137277|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##BC144555|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574901|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574902|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574903|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574904|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574905|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##NM_001018046|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##NM_025052|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##NM_001172435|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##NM_012233|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AK022494|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC146809|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC071602|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##D31886|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AB449877|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC030992|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3	0.409322	CTCF.p2:-39:0.409
chr21	44726911	44727032	reg1030919.p1	4.466	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-137797	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-199287	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-199346	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	119018	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	120024	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	352391	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr22	43053659	43053838	reg1028885.p1	4.466	+	TSC_hg19_v1_chr22_-_43045399 NM_000398	-8345	-	TSC_hg19_v1_chr22_-_43045347 AJ010116 AJ010117 AJ010118 BT009821 AB463000 CU012995 CU013283 CR456435 AF361370 Y09501 BC004821	-8416	-	TSC_hg19_v1_chr22_-_43042979 NM_001129819 NM_001171661 NM_007326	-10763	-	AK074388 TSC_hg19_v1_chr22_-_43089917 AJ245581 CU677819 AB590407 DQ891619 DQ894811	36159	-	TSC_hg19_v1_chr22_-_43116877 BC017068 GU902275 GU902276 GU902277 GU902278 GU902279 GU902280 GU902281 AK130208 NM_017436	63107	-	TSC_hg19_v1_chr22_-_43117270 AK312927	63529	-	NM_000398|CYB5R3|1727|cytochrome b5 reductase 3##AJ010116|CYB5R3|1727|cytochrome b5 reductase 3##AJ010117|CYB5R3|1727|cytochrome b5 reductase 3##AJ010118|CYB5R3|1727|cytochrome b5 reductase 3##BT009821|CYB5R3|1727|cytochrome b5 reductase 3##CU012995|CYB5R3|1727|cytochrome b5 reductase 3##CU013283|CYB5R3|1727|cytochrome b5 reductase 3##CR456435|CYB5R3|1727|cytochrome b5 reductase 3##AF361370|CYB5R3|1727|cytochrome b5 reductase 3##Y09501|CYB5R3|1727|cytochrome b5 reductase 3##BC004821|CYB5R3|1727|cytochrome b5 reductase 3##NM_001129819|CYB5R3|1727|cytochrome b5 reductase 3##NM_001171661|CYB5R3|1727|cytochrome b5 reductase 3##NM_007326|CYB5R3|1727|cytochrome b5 reductase 3##AK074388|A4GALT|53947|alpha 1,4-galactosyltransferase##AJ245581|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ891619|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ894811|A4GALT|53947|alpha 1,4-galactosyltransferase##BC017068|A4GALT|53947|alpha 1,4-galactosyltransferase##NM_017436|A4GALT|53947|alpha 1,4-galactosyltransferase##AK312927|A4GALT|53947|alpha 1,4-galactosyltransferase	0.0	
chr4	185251119	185251237	reg1019999.p1	4.466	+	BC035035 AY358676 AK057370 NM_153343	-112113	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-423267	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-423358	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	144503	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	319423	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	319655	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr5	54062725	54062819	reg1031261.p2	4.466	+	TSC_hg19_v1_chr5_+_53813761 AF395536	-249001	+	TSC_hg19_v1_chr5_+_53813656 BC117218 BC117220	-249099	+	TSC_hg19_v1_chr5_+_53813588 AK304195 NM_001145427 BC060791 BC067860 NM_001102575 NM_052870	-249227	+	AB590689 CU680150 AJ973643 X89426 BC011989 NM_001135604 NM_007036 TSC_hg19_v1_chr5_-_54281422 AK300634 AK311817	218611	-	AK312074 BC035802 NM_002104 U26174 DQ894093 EU176203 U35237	257344	+	NM_006144 BC015739 DQ893071 DQ896326 AB528402 CR456968 M18737	335719	+	AF395536|SNX18|112574|sorting nexin 18##BC117218|SNX18|112574|sorting nexin 18##BC117220|SNX18|112574|sorting nexin 18##AK304195|SNX18|112574|sorting nexin 18##NM_001145427|SNX18|112574|sorting nexin 18##BC060791|SNX18|112574|sorting nexin 18##BC067860|SNX18|112574|sorting nexin 18##NM_001102575|SNX18|112574|sorting nexin 18##NM_052870|SNX18|112574|sorting nexin 18##AJ973643|ESM1|11082|endothelial cell-specific molecule 1##X89426|ESM1|11082|endothelial cell-specific molecule 1##BC011989|ESM1|11082|endothelial cell-specific molecule 1##NM_001135604|ESM1|11082|endothelial cell-specific molecule 1##NM_007036|ESM1|11082|endothelial cell-specific molecule 1##AK300634|ESM1|11082|endothelial cell-specific molecule 1##AK311817|ESM1|11082|endothelial cell-specific molecule 1##AK312074|GZMK|3003|granzyme K (granzyme 3; tryptase II)##BC035802|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_002104|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U26174|GZMK|3003|granzyme K (granzyme 3; tryptase II)##DQ894093|GZMK|3003|granzyme K (granzyme 3; tryptase II)##EU176203|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U35237|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	0.0	
chrX	65243149	65243232	reg1031420.p1	4.466	+	TSC_hg19_v1_chrX_+_65235302 DQ680071 DQ680072	-7899	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	-355542	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	-355643	+	DQ891770 DQ894953 BC010525 AJ132502 AK293215 AK298389 AK075153 AK297050 AK301417 AK075171 NM_001100431 NM_001184830 NM_001184831 NM_007268	16712	-	NM_138737 TSC_hg19_v1_chrX_+_65382512	139285	+	TSC_hg19_v1_chrX_+_65382627 BC011561	139454	+	AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##DQ891770|VSIG4|11326|V-set and immunoglobulin domain containing 4##DQ894953|VSIG4|11326|V-set and immunoglobulin domain containing 4##BC010525|VSIG4|11326|V-set and immunoglobulin domain containing 4##AJ132502|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK293215|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK298389|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075153|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK297050|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK301417|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075171|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001100431|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184830|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184831|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_007268|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_138737|HEPH|9843|hephaestin##BC011561|HEPH|9843|hephaestin	0.940204	CTCF.p2:7:0.940
chr16	4743729	4743816	reg1031025.p2	4.465	+	TSC_hg19_v1_chr16_+_4743721 BC006223 AK092642 AX747647 CU675299	-54	+	AK315456 NM_001193452 NM_032349 TSC_hg19_v1_chr16_+_4743697	-73	+	BC014199 TSC_hg19_v1_chr16_+_4714741	-28974	+	TSC_hg19_v1_chr16_-_4784249 AK123496 NM_133450 BC031350 BC050387 AK123371 AK301683 NM_001242929	40493	-	TSC_hg19_v1_chr16_+_4784272 NM_139170	40503	+	TSC_hg19_v1_chr16_+_4784320 AF447587 BC035024	40558	+	BC006223|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##AK092642|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##AK315456|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##NM_001193452|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##NM_032349|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##BC014199|MGRN1|23295|mahogunin, ring finger 1##AK123496|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##NM_133450|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##BC031350|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##BC050387|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##AK123371|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##AK301683|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##NM_001242929|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##NM_139170|C16orf71|146562|chromosome 16 open reading frame 71##AF447587|C16orf71|146562|chromosome 16 open reading frame 71##BC035024|C16orf71|146562|chromosome 16 open reading frame 71	0.0	
chr3	190231668	190231757	reg1031412.p2	4.465	+	CU687168 BC071780 AY358607 NM_207316	-64082	-	AK314955 NM_006580	-126052	+	BC012471 AF114837 AY358652 AF101051 AF134160 AK312866 AK225963 AK296934 TSC_hg19_v1_chr3_-_190040231 NM_021101	-191498	-	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	165	+	NM_001146686	348752	-	AY398681 AY573933 BC128106 BC128107 NM_198184	698609	+	BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207##AK314955|CLDN16|10686|claudin 16##NM_006580|CLDN16|10686|claudin 16##BC012471|CLDN1|9076|claudin 1##AF114837|CLDN1|9076|claudin 1##AY358652|CLDN1|9076|claudin 1##AF101051|CLDN1|9076|claudin 1##AF134160|CLDN1|9076|claudin 1##AK312866|CLDN1|9076|claudin 1##AK296934|CLDN1|9076|claudin 1##NM_021101|CLDN1|9076|claudin 1##NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001146686|GMNC|647309|geminin coiled-coil domain containing##AY398681|OSTN|344901|osteocrin##AY573933|OSTN|344901|osteocrin##BC128106|OSTN|344901|osteocrin##BC128107|OSTN|344901|osteocrin##NM_198184|OSTN|344901|osteocrin	0.274089	CTCF.p2:-18:0.274
chr4	156680866	156681046	reg1033215.p1	4.465	+	TSC_hg19_v1_chr4_+_156680603 AK299916	-350	+	NM_000857 TSC_hg19_v1_chr4_+_156680190 AK315944 AK300296 AK315199 AK296680 AK307838 BC026332 BC060835 BC047620 X66533 AF020340	-752	+	TSC_hg19_v1_chr4_+_156588813 NM_001130684 BC028384	-92139	+	AB528059 AJ252011 NM_017419	106444	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	143921	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	194092	-	AK299916|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##NM_001130684|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC028384|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O	0.0	
chr4	83956168	83956348	reg1026337.p2	4.465	+	TSC_hg19_v1_chr4_-_83934095 AK292769 NM_001115007	-22230	-	AB111889 BX640657 TSC_hg19_v1_chr4_-_83931982 BX640966 NM_001115008 NM_194282	-24264	-	BC109278 BC109277 BX537919 TSC_hg19_v1_chr4_-_83931937 AK294256	-24347	-	NM_016129 AK001148 TSC_hg19_v1_chr4_+_83956368 AK024005 BC093007 AK223178 BC004302 BC009292 AB587420 AF100757 AK001210	66	+	BC012205 NM_001130716	74745	-	AF208846 EU570985 EU570986 TSC_hg19_v1_chr4_-_84035890 AJ422147	79633	-	AK292769|LIN54|132660|lin-54 homolog (C. elegans)##NM_001115007|LIN54|132660|lin-54 homolog (C. elegans)##AB111889|LIN54|132660|lin-54 homolog (C. elegans)##BX640657|LIN54|132660|lin-54 homolog (C. elegans)##BX640966|LIN54|132660|lin-54 homolog (C. elegans)##NM_001115008|LIN54|132660|lin-54 homolog (C. elegans)##NM_194282|LIN54|132660|lin-54 homolog (C. elegans)##BC109278|LIN54|132660|lin-54 homolog (C. elegans)##BC109277|LIN54|132660|lin-54 homolog (C. elegans)##BX537919|LIN54|132660|lin-54 homolog (C. elegans)##AK294256|LIN54|132660|lin-54 homolog (C. elegans)##NM_016129|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK001148|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK024005|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC093007|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK223178|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC004302|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC009292|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AF100757|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK001210|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC012205|PLAC8|51316|placenta-specific 8##NM_001130716|PLAC8|51316|placenta-specific 8##AF208846|PLAC8|51316|placenta-specific 8##EU570985|PLAC8|51316|placenta-specific 8##EU570986|PLAC8|51316|placenta-specific 8##AJ422147|PLAC8|51316|placenta-specific 8	0.089181	
chrX	11805762	11805842	reg1027573.p1	4.465	+	NM_006800 AK025642	-28055	+	NM_001193270 AK300814	-29085	+	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	-29459	+	AB002314 NM_014728 AK289694	350788	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	1003695	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	1003766	+	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2	0.99989	CTCF.p2:3:1.000
chr14	103571569	103571739	reg1001644.p2	4.464	+	BC113655 BC117375 NM_001077594 HQ258590	-5136	+	BC047871 BC048261 TSC_hg19_v1_chr14_-_103523736 AB032950 BC155541 NM_006035 BC078666 AF128625	-47917	-	AB384568 TSC_hg19_v1_chr14_-_103523568	-48113	-	TSC_hg19_v1_chr14_+_103589771 BC017818	18091	+	M92357 NM_006291 BC128449 BC128450 TSC_hg19_v1_chr14_+_103592873	21114	+	NM_001969 TSC_hg19_v1_chr14_+_103800527	228856	+	BC113655|EXOC3L4|91828|exocyst complex component 3-like 4##BC117375|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001077594|EXOC3L4|91828|exocyst complex component 3-like 4##HQ258590|EXOC3L4|91828|exocyst complex component 3-like 4##BC047871|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC048261|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AB032950|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC155541|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##NM_006035|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AF128625|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC017818|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_001969|EIF5|1983|eukaryotic translation initiation factor 5	0.0	
chr17	70508910	70509091	reg1024156.p1	4.464	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-391760	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-391830	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-391841	+	AK000477 TSC_hg19_v1_chr17_-_70588944	79943	-	AF331643 TSC_hg19_v1_chr17_-_71088816	579816	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	579823	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.698945	CTCF.p2:98:0.699
chr1	92952489	92952614	reg1031043.p1	4.464	+	U67369 NM_005263 TSC_hg19_v1_chr1_-_92952458	-101	-	BC032751 TSC_hg19_v1_chr1_-_92951630 NM_001127216	-936	-	TSC_hg19_v1_chr1_-_92949508 AK123009	-3019	-	AB449875 AB587441 AF008915 AF042345 NM_005665	305404	-	TSC_hg19_v1_chr1_+_93297596 NM_000969 AK092963 AK095815 AK314720 AB055762	345013	+	TSC_hg19_v1_chr1_+_93297612 BC109370	345054	+	U67369|GFI1|2672|growth factor independent 1 transcription repressor##NM_005263|GFI1|2672|growth factor independent 1 transcription repressor##BC032751|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127216|GFI1|2672|growth factor independent 1 transcription repressor##AK123009|GFI1|2672|growth factor independent 1 transcription repressor##AB449875|EVI5|7813|ecotropic viral integration site 5##AF008915|EVI5|7813|ecotropic viral integration site 5##NM_005665|EVI5|7813|ecotropic viral integration site 5##NM_000969|RPL5|6125|ribosomal protein L5##AK092963|RPL5|6125|ribosomal protein L5##AK095815|RPL5|6125|ribosomal protein L5##AK314720|RPL5|6125|ribosomal protein L5##AB055762|RPL5|6125|ribosomal protein L5##BC109370|RPL5|6125|ribosomal protein L5	0.0	
chr19	35727600	35727690	reg1029410.p1	4.464	+	BC039080 HQ258231 AK098526 NM_152481 BC117457 BC117459	-8041	-	BC009642 TSC_hg19_v1_chr19_+_35646116	-81562	+	TSC_hg19_v1_chr19_+_35645641 AB072911 BC013834 NM_144779 AY358991 BC018798 AF161462 NM_001164605	-81903	+	TSC_hg19_v1_chr19_+_35739294 AK126834	11646	+	TSC_hg19_v1_chr19_+_35739638 NM_015925 NM_205834 NM_205835 BC047376	11969	+	TSC_hg19_v1_chr19_+_35739778 AB527667 AF130366	12134	+	BC039080|FAM187B|148109|family with sequence similarity 187, member B##HQ258231|FAM187B|148109|family with sequence similarity 187, member B##AK098526|FAM187B|148109|family with sequence similarity 187, member B##NM_152481|FAM187B|148109|family with sequence similarity 187, member B##BC117457|FAM187B|148109|family with sequence similarity 187, member B##BC117459|FAM187B|148109|family with sequence similarity 187, member B##BC009642|FXYD5|53827|FXYD domain containing ion transport regulator 5##AB072911|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC013834|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_144779|FXYD5|53827|FXYD domain containing ion transport regulator 5##AY358991|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC018798|FXYD5|53827|FXYD domain containing ion transport regulator 5##AF161462|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_001164605|FXYD5|53827|FXYD domain containing ion transport regulator 5##AK126834|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_015925|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_205834|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_205835|LSR|51599|lipolysis stimulated lipoprotein receptor##BC047376|LSR|51599|lipolysis stimulated lipoprotein receptor##AF130366|LSR|51599|lipolysis stimulated lipoprotein receptor	0.935111	CTCF.p2:-13:0.935
chr5	68728403	68728583	reg1031721.p1	4.464	+	NM_001038603 NM_001244734 AK055094 BC033689 DQ682656 DQ682657 AK292962	-17547	+	AF085736 NM_133339	-61213	+	NM_133340 NM_133341 AJ001642 AJ004977 AF098533 AF098534	-61605	+	NM_002538 U53823	59625	+	U49184 TSC_hg19_v1_chr5_+_68788631 NM_001205254 AK313501 BC029886 AK290697	60054	+	NM_001205255 FJ786083 FJ786084 GQ225096 GQ225097 GQ225098 GQ402517 AB587564 DQ892423 DQ895637 AB451306 AB451437	71544	+	NM_001038603|MARVELD2|153562|MARVEL domain containing 2##NM_001244734|MARVELD2|153562|MARVEL domain containing 2##AK055094|MARVELD2|153562|MARVEL domain containing 2##BC033689|MARVELD2|153562|MARVEL domain containing 2##DQ682656|MARVELD2|153562|MARVEL domain containing 2##DQ682657|MARVELD2|153562|MARVEL domain containing 2##AK292962|MARVELD2|153562|MARVEL domain containing 2##AF085736|RAD17|5884|RAD17 homolog (S. pombe)##NM_133339|RAD17|5884|RAD17 homolog (S. pombe)##NM_133340|RAD17|5884|RAD17 homolog (S. pombe)##NM_133341|RAD17|5884|RAD17 homolog (S. pombe)##AJ001642|RAD17|5884|RAD17 homolog (S. pombe)##AJ004977|RAD17|5884|RAD17 homolog (S. pombe)##AF098533|RAD17|5884|RAD17 homolog (S. pombe)##AF098534|RAD17|5884|RAD17 homolog (S. pombe)##NM_002538|OCLN|100506658|occludin##U53823|OCLN|100506658|occludin##U49184|OCLN|100506658|occludin##NM_001205254|OCLN|100506658|occludin##AK313501|OCLN|100506658|occludin##BC029886|OCLN|100506658|occludin##AK290697|OCLN|100506658|occludin##NM_001205255|OCLN|100506658|occludin##FJ786083|OCLN|100506658|occludin##FJ786084|OCLN|100506658|occludin##GQ225096|OCLN|100506658|occludin##GQ225097|OCLN|100506658|occludin##GQ225098|OCLN|100506658|occludin##GQ402517|OCLN|100506658|occludin##DQ892423|OCLN|100506658|occludin##DQ895637|OCLN|100506658|occludin##AB451306|OCLN|100506658|occludin##AB451437|OCLN|100506658|occludin	0.0	
chr7	14737969	14738114	reg1033522.p1	4.464	+	NM_001163148	-706992	-	NM_001163149 X87175	-707173	-	NM_001163147 NM_004956	-708400	-	BC105005 BC143632 BC143633 NM_004080 NM_145695	142973	-	BC108676 AK131284 NM_001004320	863565	-	AB463880 CR536553 CU677801 L36328 TSC_hg19_v1_chr7_-_15726203 BC017021 AK313386	988088	-	NM_001163148|ETV1|2115|ets variant 1##NM_001163149|ETV1|2115|ets variant 1##X87175|ETV1|2115|ets variant 1##NM_001163147|ETV1|2115|ets variant 1##NM_004956|ETV1|2115|ets variant 1##BC105005|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143632|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC143633|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_004080|DGKB|1607|diacylglycerol kinase, beta 90kDa##NM_145695|DGKB|1607|diacylglycerol kinase, beta 90kDa##BC108676|AGMO|392636|alkylglycerol monooxygenase##AK131284|AGMO|392636|alkylglycerol monooxygenase##NM_001004320|AGMO|392636|alkylglycerol monooxygenase##CR536553|MEOX2|4223|mesenchyme homeobox 2##L36328|MEOX2|4223|mesenchyme homeobox 2##BC017021|MEOX2|4223|mesenchyme homeobox 2##AK313386|MEOX2|4223|mesenchyme homeobox 2	0.982061	CTCF.p2:-18:0.982
chr7	156620428	156620549	reg1030980.p1	4.464	+	TSC_hg19_v1_chr7_-_156468370 CU688401	-152066	-	NM_001184997 AF325690	-184793	+	NM_030936 TSC_hg19_v1_chr7_+_156433487 AK314067 NM_001184996 AL136874 BC028120 AK307316	-187023	+	TSC_hg19_v1_chr7_-_156685868 AL834394 AB463099 AM392621 AM393143 AM393254 AM393828 CU676016 AF402318 BC017663 BC063649 AF107454 AK021727 AK291037 AK299753	65259	-	TSC_hg19_v1_chr7_-_156685878 NM_022458	65428	-	TSC_hg19_v1_chr7_+_156742419 AY576779 NM_138400	121927	+	NM_001184997|RNF32|140545|ring finger protein 32##AF325690|RNF32|140545|ring finger protein 32##NM_030936|RNF32|140545|ring finger protein 32##AK314067|RNF32|140545|ring finger protein 32##NM_001184996|RNF32|140545|ring finger protein 32##AL136874|RNF32|140545|ring finger protein 32##BC028120|RNF32|140545|ring finger protein 32##AK307316|RNF32|140545|ring finger protein 32##AL834394|LMBR1|64327|limb region 1 homolog (mouse)##AM392621|LMBR1|64327|limb region 1 homolog (mouse)##AM393143|LMBR1|64327|limb region 1 homolog (mouse)##AM393254|LMBR1|64327|limb region 1 homolog (mouse)##AM393828|LMBR1|64327|limb region 1 homolog (mouse)##AF402318|LMBR1|64327|limb region 1 homolog (mouse)##BC017663|LMBR1|64327|limb region 1 homolog (mouse)##BC063649|LMBR1|64327|limb region 1 homolog (mouse)##AK021727|LMBR1|64327|limb region 1 homolog (mouse)##AK291037|LMBR1|64327|limb region 1 homolog (mouse)##AK299753|LMBR1|64327|limb region 1 homolog (mouse)##NM_022458|LMBR1|64327|limb region 1 homolog (mouse)##AY576779|NOM1|64434|nucleolar protein with MIF4G domain 1##NM_138400|NOM1|64434|nucleolar protein with MIF4G domain 1	0.989552	CTCF.p2:-10:0.990
chr8	11341555	11341735	reg1022974.p2	4.464	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-17416	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-136641	-	AJ291677 NM_054028 BC131696	-153135	+	S76617 NM_001715 BC018703 BC004473 BC038555	9948	+	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	220075	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	285623	+	AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##AJ291677|SLC35G5|83650|solute carrier family 35, member G5##NM_054028|SLC35G5|83650|solute carrier family 35, member G5##BC131696|SLC35G5|83650|solute carrier family 35, member G5##S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)	0.0	
chr15	51675132	51675273	reg1030228.p2	4.463	+	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	-41408	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	-44438	-	AY517501 NM_207381	-277730	-	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	239771	-	AF453583 NM_001165257 NM_013243 AF078851 TSC_hg19_v1_chr15_+_51973699 AY359093 AK075314 AK296466 AK290175	298429	+	AK129759 DQ892424 DQ895638 TSC_hg19_v1_chr15_-_52029856	354674	-	NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2##AF453583|SCG3|29106|secretogranin III##NM_001165257|SCG3|29106|secretogranin III##NM_013243|SCG3|29106|secretogranin III##AF078851|SCG3|29106|secretogranin III##AY359093|SCG3|29106|secretogranin III##AK075314|SCG3|29106|secretogranin III##AK296466|SCG3|29106|secretogranin III##AK290175|SCG3|29106|secretogranin III##AK129759|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ892424|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##DQ895638|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2	0.03455	
chr15	52401942	52402034	reg1029395.p1	4.463	+	TSC_hg19_v1_chr15_+_52311442 BC035492	-90527	+	TSC_hg19_v1_chr15_+_52311432 CR749401	-90554	+	TSC_hg19_v1_chr15_+_52311425 NM_002748	-90569	+	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	2958	-	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	70153	-	TSC_hg19_v1_chr15_+_52472257 AF007131	70347	+	BC035492|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##NM_002748|MAPK6|5597|mitogen-activated protein kinase 6##AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973	0.0	
chr19	45225490	45225670	reg1030639.p1	4.463	+	BC144608 NM_001039213	-23160	+	BC083499 NM_001127893 NM_020219	-50857	+	TSC_hg19_v1_chr19_+_45147209 AK300349 AK094177 BC015542	-78364	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	26401	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	55576	+	TSC_hg19_v1_chr19_+_45312359 BC014065 NM_001013257 NM_005581 X83425 BC036745 X80026 BC050450 AB463427 CU690688 HE572749	86776	+	BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##BC083499|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_001127893|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_020219|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##AK300349|PVR|5817|poliovirus receptor##AK094177|PVR|5817|poliovirus receptor##BC015542|PVR|5817|poliovirus receptor##NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)	0.0	
chr20	7356691	7356805	reg1030448.p1	4.463	+	BC069214 NM_001200	-608004	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-1252585	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-1252871	-	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	564354	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	643552	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	643659	-	BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4	0.871441	CTCF.p2:17:0.871
chr2	223654307	223654449	reg1031399.p2	4.463	+	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	-117969	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	-133584	-	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	-365071	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	71369	+	NM_080671 TSC_hg19_v1_chr2_+_223916907 DQ192293 AK313203 BC014429 AY065987	262519	+	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	812688	-	AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_080671|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##DQ192293|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AK313203|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##BC014429|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##AY065987|KCNE4|23704|potassium voltage-gated channel, Isk-related family, member 4##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II	0.0	
chr22	37621569	37621726	reg1031092.p1	4.463	+	BC042068 NM_001051 AK291165	-13264	-	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	-37356	-	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	-75695	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	18574	-	TSC_hg19_v1_chr22_-_37640315 AK096924 BC001485 NM_002872	18654	-	AF125349 AF075458 NM_013385 TSC_hg19_v1_chr22_+_37678513	56821	+	BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##AK096924|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BC001485|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##NM_002872|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##AF125349|CYTH4|27128|cytohesin 4##AF075458|CYTH4|27128|cytohesin 4##NM_013385|CYTH4|27128|cytohesin 4	0.0	
chr4	26199180	26199360	reg1028703.p2	4.463	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-283406	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-334716	-	NM_001177999 AK314514	-541180	+	L07875 BC020780 NM_005349 NM_203283	122049	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	123039	+	TSC_hg19_v1_chr4_+_26322635 AK302230	123366	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.0	
chr9	75142408	75142589	reg1028539.p1	4.463	+	AF417578 NM_138691	-5782	+	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	-162398	-	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	-162773	-	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	425447	-	NM_000689	425734	-	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	624280	+	AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1	0.010383	
chr10	80831013	80831108	reg1032243.p1	4.462	+	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	-2272	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-1037429	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-1037504	+	TSC_hg19_v1_chr10_+_80899458 AK025812	68424	+	TSC_hg19_v1_chr10_+_81003207 AB033050	172070	+	AK299728 TSC_hg19_v1_chr10_+_81065901	234828	+	BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK299728|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.030611	
chr12	72676647	72676735	reg1029748.p2	4.462	+	TSC_hg19_v1_chr12_-_72667288 BC040230	-9421	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	-10187	+	AK095156 TSC_hg19_v1_chr12_-_72666355	-10348	-	NM_001136262 TSC_hg19_v1_chr12_+_74931614 AK056642	2254894	+	TSC_hg19_v1_chr12_+_74931622 BC009111 AL713650	2254948	+	AK054742 TSC_hg19_v1_chr12_+_74933681	2256929	+	BC040230|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AK095156|LOC283392|283392|uncharacterized LOC283392##NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B##AK056642|ATXN7L3B|552889|ataxin 7-like 3B##BC009111|ATXN7L3B|552889|ataxin 7-like 3B##AL713650|ATXN7L3B|552889|ataxin 7-like 3B	0.932574	CTCF.p2:5:0.933
chr4	153225453	153225633	reg1026808.p2	4.462	+	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	-543402	-	TSC_hg19_v1_chr4_+_152330327 NM_001109977	-895182	+	BC121109 BC121110 NM_183375	-1027219	+	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	48353	-	NM_001013415 AY008274	78121	-	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	230751	-	AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##NM_001109977|FAM160A1|729830|family with sequence similarity 160, member A1##BC121109|PRSS48|345062|protease, serine, 48##BC121110|PRSS48|345062|protease, serine, 48##NM_183375|PRSS48|345062|protease, serine, 48##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7	0.0	
chr5	106906582	106906763	reg1028494.p1	4.462	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-4008191	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4312215	+	BC024591 NM_015216 AB463068	-4441398	+	AK308672 NM_001962 U26403	99918	-	TSC_hg19_v1_chr5_-_107717106 AK126722	810458	-	BC063316 NM_001163315	811126	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.0	
chr5	116099721	116099896	reg1029557.p1	4.462	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-189294	-	TSC_hg19_v1_chr5_+_115898220 D28352	-201584	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-679087	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2224430	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2307003	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2307357	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr6	135861781	135861927	reg1028120.p1	4.462	+	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	-42890	+	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	-42969	-	AY133243 TSC_hg19_v1_chr6_-_135818858 DQ090887	-43029	-	AK290582 AB038040 NM_018945 TSC_hg19_v1_chr6_+_136172838 AJ251860 BC070267	310997	+	TSC_hg19_v1_chr6_-_136571414 AK292303 BC063688 AK125758 NM_001099286 NM_138419	709575	-	BC078160 BC063846 TSC_hg19_v1_chr6_-_136610926 BX649160 BC016682	749056	-	BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##AY133243|AHI1|54806|Abelson helper integration site 1##DQ090887|AHI1|54806|Abelson helper integration site 1##AK290582|PDE7B|27115|phosphodiesterase 7B##AB038040|PDE7B|27115|phosphodiesterase 7B##NM_018945|PDE7B|27115|phosphodiesterase 7B##AJ251860|PDE7B|27115|phosphodiesterase 7B##BC070267|PDE7B|27115|phosphodiesterase 7B##AK292303|FAM54A|113115|family with sequence similarity 54, member A##BC063688|FAM54A|113115|family with sequence similarity 54, member A##AK125758|FAM54A|113115|family with sequence similarity 54, member A##NM_001099286|FAM54A|113115|family with sequence similarity 54, member A##NM_138419|FAM54A|113115|family with sequence similarity 54, member A##BC078160|BCLAF1|9774|BCL2-associated transcription factor 1##BC063846|BCLAF1|9774|BCL2-associated transcription factor 1##BX649160|BCLAF1|9774|BCL2-associated transcription factor 1##BC016682|BCLAF1|9774|BCL2-associated transcription factor 1	0.0	
chr9	135526703	135526825	reg1032745.p1	4.462	+	TSC_hg19_v1_chr9_+_135457992 AK054797 NM_020064 BC136956 BC136969 BC144433 AF325688 AB463426 AF321618	-68685	+	AK128819 NM_207417 BC118593 BC124555	-241152	+	TSC_hg19_v1_chr9_-_135282210 BC050734 X83973 BC143821 BC127669 BC127670 BC143048 BC143049 BC062692 BC104639 AK225119 AK302902 NM_001205296 NM_007344	-244563	-	TSC_hg19_v1_chr9_-_135545374 AK225121 AK027002 AK225350 AK304715 BC012726	18616	-	TSC_hg19_v1_chr9_+_135545447 BC060821	18654	+	AF335567 AF335568 AF335569 AF427339 AK027484 NM_022779 NM_138620	19023	-	AK054797|BARHL1|56751|BarH-like homeobox 1##NM_020064|BARHL1|56751|BarH-like homeobox 1##BC136956|BARHL1|56751|BarH-like homeobox 1##BC136969|BARHL1|56751|BarH-like homeobox 1##BC144433|BARHL1|56751|BarH-like homeobox 1##AF325688|BARHL1|56751|BarH-like homeobox 1##AF321618|BARHL1|56751|BarH-like homeobox 1##AK128819|C9orf171|389799|chromosome 9 open reading frame 171##NM_207417|C9orf171|389799|chromosome 9 open reading frame 171##BC118593|C9orf171|389799|chromosome 9 open reading frame 171##BC124555|C9orf171|389799|chromosome 9 open reading frame 171##BC050734|TTF1|7270|transcription termination factor, RNA polymerase I##BC143821|TTF1|7270|transcription termination factor, RNA polymerase I##BC127669|TTF1|7270|transcription termination factor, RNA polymerase I##BC127670|TTF1|7270|transcription termination factor, RNA polymerase I##BC143048|TTF1|7270|transcription termination factor, RNA polymerase I##BC143049|TTF1|7270|transcription termination factor, RNA polymerase I##BC062692|TTF1|7270|transcription termination factor, RNA polymerase I##BC104639|TTF1|7270|transcription termination factor, RNA polymerase I##AK225119|TTF1|7270|transcription termination factor, RNA polymerase I##AK302902|TTF1|7270|transcription termination factor, RNA polymerase I##NM_001205296|TTF1|7270|transcription termination factor, RNA polymerase I##NM_007344|TTF1|7270|transcription termination factor, RNA polymerase I##AK225121|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK027002|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK225350|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK304715|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC012726|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC060821|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##AF335567|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF335568|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF335569|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF427339|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK027484|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##NM_022779|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##NM_138620|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31	0.906072	CTCF.p2:-10:0.906
chr14	59423167	59423347	reg1028620.p2	4.461	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-318511	+	AK302579 NM_001244193 AK310356 AK302718	-516831	+	NM_014749 BC066647	-528526	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	232147	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	508665	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	508799	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.0	
chr15	64189121	64189254	reg1028493.p2	4.461	+	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-63047	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-63067	-	TSC_hg19_v1_chr15_-_64126081 U50078	-63103	-	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	149423	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	196910	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	198953	+	AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1	0.0	
chr16	11349442	11349623	reg1011294.p5	4.461	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-311089	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-313297	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-313366	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	518	-	X63758 BC096135 BC096136 BC096137 NM_005425	13606	-	NM_021247	17919	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.042099	
chr17	16850778	16850861	reg1030423.p1	4.461	+	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-257215	+	AK131401 NM_020787	-293658	-	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-378323	-	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	24585	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	95145	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	258794	-	EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6	0.0	
chr17	53497629	53497809	reg1029725.p2	4.461	+	TSC_hg19_v1_chr17_+_53344967 AK295726 AK074289	-152733	+	AK290043 TSC_hg19_v1_chr17_+_53343204	-154532	+	TSC_hg19_v1_chr17_+_53342370 BC036093 M95585	-155278	+	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	1536	-	BC010128 AK001832 NM_018286	302430	-	AK095175 NM_001099640	311743	-	AK295726|HLF|3131|hepatic leukemia factor##AK074289|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor##BC036093|HLF|3131|hepatic leukemia factor##M95585|HLF|3131|hepatic leukemia factor##CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100	0.0	
chr2	39957966	39958088	reg1032074.p1	4.461	+	TSC_hg19_v1_chr2_+_39893056 NM_152390 AK075440 BC029530 AY358773 DQ890996	-64960	+	NM_001167959	-65390	+	TSC_hg19_v1_chr2_+_39664565 AK095178	-293457	+	TSC_hg19_v1_chr2_-_40006399 CU678598 EU831465 EU831552 AK301353 AK298178 AK226034 BC004163 BC013299 AK307754 AL832115 AK093580 AX748213 AK292002	48267	-	TSC_hg19_v1_chr2_-_40006408 NM_025264	48387	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	699404	-	NM_152390|TMEM178|130733|transmembrane protein 178##AK075440|TMEM178|130733|transmembrane protein 178##BC029530|TMEM178|130733|transmembrane protein 178##AY358773|TMEM178|130733|transmembrane protein 178##DQ890996|TMEM178|130733|transmembrane protein 178##NM_001167959|TMEM178|130733|transmembrane protein 178##AK095178|LOC728730|728730|uncharacterized LOC728730##EU831465|THUMPD2|80745|THUMP domain containing 2##EU831552|THUMPD2|80745|THUMP domain containing 2##AK301353|THUMPD2|80745|THUMP domain containing 2##AK298178|THUMPD2|80745|THUMP domain containing 2##AK226034|THUMPD2|80745|THUMP domain containing 2##BC004163|THUMPD2|80745|THUMP domain containing 2##BC013299|THUMPD2|80745|THUMP domain containing 2##AK307754|THUMPD2|80745|THUMP domain containing 2##AL832115|THUMPD2|80745|THUMP domain containing 2##AK093580|THUMPD2|80745|THUMP domain containing 2##AK292002|THUMPD2|80745|THUMP domain containing 2##NM_025264|THUMPD2|80745|THUMP domain containing 2##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1	0.674371	CTCF.p2:10:0.674
chr5	77587034	77587133	reg1030252.p1	4.461	+	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	-514951	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	-652569	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	-652654	-	BC113045 CU691576 DQ894915 EU176289 TSC_hg19_v1_chr5_-_77590458 AK225908 U91931	3342	-	TSC_hg19_v1_chr5_-_77590488 AY623424 AK303300	3394	-	TSC_hg19_v1_chr5_-_77590495 U81504	3409	-	BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##EU446696|OTP|23440|orthopedia homeobox##DQ894915|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##EU176289|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK225908|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U91931|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AY623424|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK303300|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U81504|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit	0.094552	
chr7	30948446	30948545	reg1032382.p1	4.461	+	TSC_hg19_v1_chr7_+_30811046 AK026027 NM_032222 AF538962 BC043210 BC098569	-137459	+	TSC_hg19_v1_chr7_+_30791750 AF128846 AF128847 BC106902 BC106903 NM_001199219 NM_006774 AK308762 AK313832 AB590719 BC103712 BC033813	-156739	+	AF361106 AF361107 Y10151 Y10152 Y10153 AF011406 NM_001202475 NM_001202481 AF361108	-208793	-	NM_198098 TSC_hg19_v1_chr7_+_30951467 AK298091 AK298313 AK300995 AK304684 AK312656 AK301351 BC022486 M77829 S73482 U41517 DQ892366 DQ895575 CU692648 AB463415 AB451275 AB451402	2974	+	AK309608 NM_001185060 AK309691 AK309688 NM_001185061 NM_001185062	12521	+	L01406 L09237 NM_000823 AY557192	55164	+	AK026027|FAM188B|84182|family with sequence similarity 188, member B##NM_032222|FAM188B|84182|family with sequence similarity 188, member B##AF538962|FAM188B|84182|family with sequence similarity 188, member B##BC043210|FAM188B|84182|family with sequence similarity 188, member B##BC098569|FAM188B|84182|family with sequence similarity 188, member B##AF128846|INMT|11185|indolethylamine N-methyltransferase##AF128847|INMT|11185|indolethylamine N-methyltransferase##BC106902|INMT|11185|indolethylamine N-methyltransferase##BC106903|INMT|11185|indolethylamine N-methyltransferase##NM_001199219|INMT|11185|indolethylamine N-methyltransferase##NM_006774|INMT|11185|indolethylamine N-methyltransferase##AK308762|INMT-FAM188B|100526825|INMT-FAM188B readthrough (non-protein coding)##AK313832|INMT|11185|indolethylamine N-methyltransferase##BC103712|INMT|11185|indolethylamine N-methyltransferase##BC033813|INMT|11185|indolethylamine N-methyltransferase##AF361106|CRHR2|1395|corticotropin releasing hormone receptor 2##AF361107|CRHR2|1395|corticotropin releasing hormone receptor 2##Y10151|CRHR2|1395|corticotropin releasing hormone receptor 2##Y10152|CRHR2|1395|corticotropin releasing hormone receptor 2##Y10153|CRHR2|1395|corticotropin releasing hormone receptor 2##AF011406|CRHR2|1395|corticotropin releasing hormone receptor 2##NM_001202475|CRHR2|1395|corticotropin releasing hormone receptor 2##NM_001202481|CRHR2|1395|corticotropin releasing hormone receptor 2##AF361108|CRHR2|1395|corticotropin releasing hormone receptor 2##NM_198098|AQP1|358|aquaporin 1 (Colton blood group)##AK298091|AQP1|358|aquaporin 1 (Colton blood group)##AK298313|AQP1|358|aquaporin 1 (Colton blood group)##AK300995|AQP1|358|aquaporin 1 (Colton blood group)##AK304684|AQP1|358|aquaporin 1 (Colton blood group)##AK312656|AQP1|358|aquaporin 1 (Colton blood group)##AK301351|AQP1|358|aquaporin 1 (Colton blood group)##BC022486|AQP1|358|aquaporin 1 (Colton blood group)##M77829|AQP1|358|aquaporin 1 (Colton blood group)##S73482|AQP1|358|aquaporin 1 (Colton blood group)##U41517|AQP1|358|aquaporin 1 (Colton blood group)##DQ892366|AQP1|358|aquaporin 1 (Colton blood group)##DQ895575|AQP1|358|aquaporin 1 (Colton blood group)##AB451275|AQP1|358|aquaporin 1 (Colton blood group)##AB451402|AQP1|358|aquaporin 1 (Colton blood group)##AK309608|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185060|AQP1|358|aquaporin 1 (Colton blood group)##AK309691|AQP1|358|aquaporin 1 (Colton blood group)##AK309688|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185061|AQP1|358|aquaporin 1 (Colton blood group)##NM_001185062|AQP1|358|aquaporin 1 (Colton blood group)##L01406|GHRHR|2692|growth hormone releasing hormone receptor##L09237|GHRHR|2692|growth hormone releasing hormone receptor##NM_000823|GHRHR|2692|growth hormone releasing hormone receptor##AY557192|GHRHR|2692|growth hormone releasing hormone receptor	0.224657	CTCF.p2:11:0.225
chr11	73700340	73700477	reg1033757.p1	4.460	+	TSC_hg19_v1_chr11_-_73694300 AK025742	-6065	-	TSC_hg19_v1_chr11_-_73693886 AK222540 AK222557 NM_003355	-6523	-	U94592 BC011737 TSC_hg19_v1_chr11_-_73693862	-6564	-	NM_003356 NM_022803	19873	-	TSC_hg19_v1_chr11_-_73881923 AB231764 AK092089 AX747350 BC037429 NM_015531	181660	-	TSC_hg19_v1_chr11_+_73882299 AK022725	181874	+	AK025742|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##BC011737|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003356|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##NM_022803|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3##AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3##NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3##AK022725|PPME1|51400|protein phosphatase methylesterase 1	0.285952	CTCF.p2:-6:0.286
chr1	198854250	198854358	reg1032821.p1	4.460	+	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-245974	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-246079	+	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	-246131	+	TSC_hg19_v1_chr1_-_198906559 EF413001	52243	-	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	1142565	+	AK316513 TSC_hg19_v1_chr1_+_200011716	1157420	+	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	0.936496	CTCF.p2:-6:0.936
chr13	41019595	41019775	reg1019805.p1	4.460	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-789824	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-842323	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-842358	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	221027	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	325607	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	325647	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.0	
chr16	27249036	27249176	reg1030482.p2	4.460	+	AK297166 NM_001145348	-33811	+	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	-34279	+	NM_001145545 BC031257 AK311574	-170859	+	TSC_hg19_v1_chr16_-_27280055 AK315674	30946	-	TSC_hg19_v1_chr16_-_27280058 AF161451 AF161455 AK056795 NM_145080	30979	-	TSC_hg19_v1_chr16_+_27325254 AK314863 NM_000418 NM_001008699 AK303255	76148	+	AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##AK315674|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AF161451|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AF161455|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AK056795|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##NM_145080|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AK314863|IL4R|3566|interleukin 4 receptor##NM_000418|IL4R|3566|interleukin 4 receptor##NM_001008699|IL4R|3566|interleukin 4 receptor##AK303255|IL4R|3566|interleukin 4 receptor	0.01138	
chr7	121008348	121008528	reg1030990.p1	4.460	+	AF169963 NM_057168	-39349	+	AF152584 NM_016087	-43018	+	AK025639 AK225313 TSC_hg19_v1_chr7_+_120702920	-305565	+	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	27899	-	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	27976	-	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	504723	+	AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16##AK025639|C7orf58|79974|chromosome 7 open reading frame 58##AK225313|C7orf58|79974|chromosome 7 open reading frame 58##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C##AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1	0.0	
chr8	124475328	124475409	reg1008329.p2	4.460	+	AK001066 NM_018024 AK225643 TSC_hg19_v1_chr8_+_124429026 AK293492 BC008781 AB528691 CU679103	-46342	+	CR749832 TSC_hg19_v1_chr8_-_124428591	-46770	-	TSC_hg19_v1_chr8_-_124408688 NM_014109	-66671	-	BC120963 BC120964 BC024030 NM_148177	69011	-	AY059629 AJ420108 TSC_hg19_v1_chr8_-_124553447 AK056986 EF143260	77982	-	TSC_hg19_v1_chr8_-_124553499 NM_001242463 NM_058229	78113	-	AK001066|WDYHV1|55093|WDYHV motif containing 1##NM_018024|WDYHV1|55093|WDYHV motif containing 1##AK225643|WDYHV1|55093|WDYHV motif containing 1##AK293492|WDYHV1|55093|WDYHV motif containing 1##BC008781|WDYHV1|55093|WDYHV motif containing 1##CR749832|ATAD2|29028|ATPase family, AAA domain containing 2##NM_014109|ATAD2|29028|ATPase family, AAA domain containing 2##BC120963|FBXO32|114907|F-box protein 32##BC120964|FBXO32|114907|F-box protein 32##BC024030|FBXO32|114907|F-box protein 32##NM_148177|FBXO32|114907|F-box protein 32##AY059629|FBXO32|114907|F-box protein 32##AJ420108|FBXO32|114907|F-box protein 32##AK056986|FBXO32|114907|F-box protein 32##EF143260|FBXO32|114907|F-box protein 32##NM_001242463|FBXO32|114907|F-box protein 32##NM_058229|FBXO32|114907|F-box protein 32	0.0	
chrX	148742400	148742521	reg1031476.p1	4.460	+	AK097391 AK096308 AK297335 TSC_hg19_v1_chrX_-_148713449 NM_001174092 NM_032508 AF530473	-28977	-	TSC_hg19_v1_chrX_-_148713302 BC103820 BC103821 BC103822	-29161	-	NM_001164415 NM_016153	-65487	-	AK127849 NM_001011544	27442	+	NM_005366 AY747607 BC004479	51309	+	NM_001164415 NM_016153	113265	+	AK097391|TMEM185A|84548|transmembrane protein 185A##AK096308|TMEM185A|84548|transmembrane protein 185A##AK297335|TMEM185A|84548|transmembrane protein 185A##NM_001174092|TMEM185A|84548|transmembrane protein 185A##NM_032508|TMEM185A|84548|transmembrane protein 185A##AF530473|TMEM185A|84548|transmembrane protein 185A##BC103820|TMEM185A|84548|transmembrane protein 185A##BC103821|TMEM185A|84548|transmembrane protein 185A##BC103822|TMEM185A|84548|transmembrane protein 185A##NM_001164415|HSFX2|100130086|heat shock transcription factor family, X linked 2##NM_016153|HSFX1|100506164|heat shock transcription factor family, X linked 1##AK127849|MAGEA11|4110|melanoma antigen family A, 11##NM_001011544|MAGEA11|4110|melanoma antigen family A, 11##NM_005366|MAGEA11|4110|melanoma antigen family A, 11##AY747607|MAGEA11|4110|melanoma antigen family A, 11##BC004479|MAGEA11|4110|melanoma antigen family A, 11##NM_001164415|HSFX2|100130086|heat shock transcription factor family, X linked 2##NM_016153|HSFX1|100506164|heat shock transcription factor family, X linked 1	0.1262	
chr10	12110608	12110788	reg1031144.p1	4.459	+	NM_080599 TSC_hg19_v1_chr10_-_12085142	-25616	-	TSC_hg19_v1_chr10_-_12084777 BC054011 AK310925 BC114964 BC115737 BC090919 NM_015542 AF318574 AF301013 AK096191	-25890	-	AK056703 TSC_hg19_v1_chr10_-_11936707	-173996	-	TSC_hg19_v1_chr10_+_12110952 NM_018706	238	+	TSC_hg19_v1_chr10_+_12110968 BC002477 BC007955 AB046850 AK309810 CU675875	309	+	TSC_hg19_v1_chr10_+_12171686 NM_001142627 NM_001142628 NM_018144 AK301841 AK292295 BC026179 AF346603 AK057532 AK022640	60955	+	NM_080599|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AK310925|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC114964|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC115737|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC090919|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##NM_015542|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AF318574|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AF301013|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AK096191|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AK056703|LOC219731|219731|uncharacterized LOC219731##NM_018706|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1##BC002477|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1##BC007955|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1##AK309810|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1##NM_001142627|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##NM_001142628|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##NM_018144|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AK301841|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AK292295|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##BC026179|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AF346603|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AK057532|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AK022640|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)	0.0	
chr11	118867737	118867900	reg1030849.p1	4.459	+	AB094092 NM_181721 BC028191 BC125040 BC038969	-25340	+	NM_006760 Y13645 BC113900 AY455312 AB009454	-40755	+	AB094091 NM_182557	-86206	-	TSC_hg19_v1_chr11_+_118868847 AB094093 NM_198489	1031	+	TSC_hg19_v1_chr11_+_118868864 BC126469 BC126471 BC144208 BC144209 BC144210 HQ258386	1066	+	BC004986 TSC_hg19_v1_chr11_-_118889072 AK311883 M64716 D28369 NM_001028	21240	-	AB094092|FOXR1|283150|forkhead box R1##NM_181721|FOXR1|283150|forkhead box R1##BC028191|FOXR1|283150|forkhead box R1##BC125040|FOXR1|283150|forkhead box R1##BC038969|FOXR1|283150|forkhead box R1##NM_006760|UPK2|7379|uroplakin 2##Y13645|UPK2|7379|uroplakin 2##BC113900|UPK2|7379|uroplakin 2##AY455312|UPK2|7379|uroplakin 2##AB009454|UPK2|7379|uroplakin 2##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like##AB094093|CCDC84|338657|coiled-coil domain containing 84##NM_198489|CCDC84|338657|coiled-coil domain containing 84##BC126469|CCDC84|338657|coiled-coil domain containing 84##BC126471|CCDC84|338657|coiled-coil domain containing 84##BC144208|CCDC84|338657|coiled-coil domain containing 84##BC144209|CCDC84|338657|coiled-coil domain containing 84##BC144210|CCDC84|338657|coiled-coil domain containing 84##HQ258386|CCDC84|338657|coiled-coil domain containing 84##BC004986|RPS25|6230|ribosomal protein S25##AK311883|RPS25|6230|ribosomal protein S25##M64716|RPS25|6230|ribosomal protein S25##D28369|RPS25|6230|ribosomal protein S25##NM_001028|RPS25|6230|ribosomal protein S25	0.0	
chr11	73036331	73036512	reg1024980.p1	4.459	+	TSC_hg19_v1_chr11_-_73020422 AK300095	-15998	-	BC137228 NM_014786 AF378754	-16756	+	TSC_hg19_v1_chr11_+_73019337 AK074500	-17017	+	TSC_hg19_v1_chr11_+_73087471 AK027899 NM_152222 BC051810 BC017279	51016	+	TSC_hg19_v1_chr11_+_73087683 AF319553 NM_032871	51270	+	D87470 TSC_hg19_v1_chr11_-_73309158 AK292054 EF197985 BC052341 EF363480 NM_015159	272777	-	AK300095|LOC100287837|100287837|uncharacterized LOC100287837##BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK027899|RELT|84957|RELT tumor necrosis factor receptor##NM_152222|RELT|84957|RELT tumor necrosis factor receptor##BC051810|RELT|84957|RELT tumor necrosis factor receptor##BC017279|RELT|84957|RELT tumor necrosis factor receptor##AF319553|RELT|84957|RELT tumor necrosis factor receptor##NM_032871|RELT|84957|RELT tumor necrosis factor receptor##D87470|FAM168A|23201|family with sequence similarity 168, member A##AK292054|FAM168A|23201|family with sequence similarity 168, member A##EF197985|FAM168A|23201|family with sequence similarity 168, member A##BC052341|FAM168A|23201|family with sequence similarity 168, member A##EF363480|FAM168A|23201|family with sequence similarity 168, member A##NM_015159|FAM168A|23201|family with sequence similarity 168, member A	0.0	
chr15	67426654	67426834	reg1031850.p2	4.459	+	NM_001145102 AK316017	-8621	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	-68343	+	TSC_hg19_v1_chr15_+_67358179 AK290881	-68569	+	AK298139 NM_001145103	3614	+	NM_001145104 AK300614 AK301348	31752	+	AB528136 AM393020 AM393411 CR533540 CU691322 TSC_hg19_v1_chr15_-_67547000 AK021568 AL136715 BC058886 BC047026 BC035852 NM_024666	120276	-	NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3##NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##AK290881|SMAD3|4088|SMAD family member 3##AK298139|SMAD3|4088|SMAD family member 3##NM_001145103|SMAD3|4088|SMAD family member 3##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3##AM393020|AAGAB|79719|alpha- and gamma-adaptin binding protein##AM393411|AAGAB|79719|alpha- and gamma-adaptin binding protein##CR533540|AAGAB|79719|alpha- and gamma-adaptin binding protein##AK021568|AAGAB|79719|alpha- and gamma-adaptin binding protein##AL136715|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC058886|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC047026|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC035852|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_024666|AAGAB|79719|alpha- and gamma-adaptin binding protein	0.0	
chr16	81774373	81774505	reg1030378.p2	4.459	+	AY172689 NM_030629	-245486	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-295606	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-425789	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	38458	+	TSC_hg19_v1_chr16_+_81812901 AB208914	38463	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	38491	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr2	100851659	100851730	reg1029276.p1	4.459	+	BC036895 TSC_hg19_v1_chr2_-_100759026 NM_002285	-92691	-	TSC_hg19_v1_chr2_-_100722359 AK297407 AK092327 AX747484	-129236	-	TSC_hg19_v1_chr2_-_100722267 AK308645	-129426	-	DQ020495 NM_198461	87500	-	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	182403	-	AB164464 NM_001011717	235249	+	BC036895|AFF3|3899|AF4/FMR2 family, member 3##NM_002285|AFF3|3899|AF4/FMR2 family, member 3##AK297407|AFF3|3899|AF4/FMR2 family, member 3##AK092327|AFF3|3899|AF4/FMR2 family, member 3##AK308645|AFF3|3899|AF4/FMR2 family, member 3##DQ020495|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##NM_198461|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S	0.0	
chr4	156298140	156298303	reg1030555.p1	4.459	+	TSC_hg19_v1_chr4_-_156298108 AK024812 AY690636 NM_001039580	-110	-	TSC_hg19_v1_chr4_-_156297990 AK301075 BC146864 BC128540 BC128541 BC056683	-213	-	TSC_hg19_v1_chr4_-_156297959 BC022852	-266	-	NM_000856 NM_001130682 NM_001130686 NM_001130687 X66534 Y15723 AK312952 BC095395 TSC_hg19_v1_chr4_+_156587999 AK309950 AK096588 NM_001130683 NM_001130685 BX649180 AK226125 BX647200 BC012627	289954	+	TSC_hg19_v1_chr4_+_156588813 NM_001130684 BC028384	290596	+	NM_000857 TSC_hg19_v1_chr4_+_156680190 AK315944 AK300296 AK315199 AK296680 AK307838 BC026332 BC060835 BC047620 X66533 AF020340	381983	+	AK024812|MAP9|79884|microtubule-associated protein 9##AY690636|MAP9|79884|microtubule-associated protein 9##NM_001039580|MAP9|79884|microtubule-associated protein 9##AK301075|MAP9|79884|microtubule-associated protein 9##BC146864|MAP9|79884|microtubule-associated protein 9##BC128540|MAP9|79884|microtubule-associated protein 9##BC128541|MAP9|79884|microtubule-associated protein 9##BC056683|MAP9|79884|microtubule-associated protein 9##BC022852|MAP9|79884|microtubule-associated protein 9##NM_000856|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130682|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130686|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130687|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##X66534|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##Y15723|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK312952|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC095395|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK309950|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK096588|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130683|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130685|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BX649180|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AK226125|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BX647200|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC012627|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_001130684|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC028384|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3	0.0	
chr5	101559634	101559764	reg1031502.p2	4.459	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	-1320771	-	AF529367 TSC_hg19_v1_chr5_+_99871306	-1688429	+	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	-1688626	+	AF401643 AB527220 AK128854 TSC_hg19_v1_chr5_-_101631989 BX647349 AY273896 NM_180991	72409	-	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	274934	-	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	641831	+	L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AF529367|FAM174A|345757|family with sequence similarity 174, member A##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF401643|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AK128854|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##BX647349|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##AY273896|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##NM_180991|SLCO4C1|353189|solute carrier organic anion transporter family, member 4C1##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase	0.976003	CTCF.p2:21:0.976
chr5	68041485	68041579	reg1033070.p1	4.459	+	AK094785 NM_001242466 AK294919	-453080	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-454986	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-457238	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	348271	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	348350	+	AK292925 TSC_hg19_v1_chr5_+_68389913	348381	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.612662	CTCF.p2:5:0.613
chr6	36953927	36954108	reg1030035.p1	4.459	+	AK022783 TSC_hg19_v1_chr6_-_36953950 AF176006 AF192559 BC125055 BC153873 NM_014341 BC110914	-40	-	TSC_hg19_v1_chr6_-_36953944 BC125056	-74	-	TSC_hg19_v1_chr6_-_36953924 BC009962 AK225628	-91	-	TSC_hg19_v1_chr6_-_36954224 AK315067	253	-	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	19484	+	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	184105	+	AK022783|MTCH1|23787|mitochondrial carrier 1##AF176006|MTCH1|23787|mitochondrial carrier 1##AF192559|MTCH1|23787|mitochondrial carrier 1##BC125055|MTCH1|23787|mitochondrial carrier 1##BC153873|MTCH1|23787|mitochondrial carrier 1##NM_014341|MTCH1|23787|mitochondrial carrier 1##BC110914|MTCH1|23787|mitochondrial carrier 1##BC125056|MTCH1|23787|mitochondrial carrier 1##BC009962|MTCH1|23787|mitochondrial carrier 1##AK225628|MTCH1|23787|mitochondrial carrier 1##AK315067|MTCH1|23787|mitochondrial carrier 1##BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene	0.0	
chr8	92265656	92265766	reg1032059.p2	4.459	+	AJ413229 NM_052832 NM_134266 AF331521 AJ413228 AJ413230	-4181	+	AK097393 NM_001129890 AK130865	-150852	+	NM_016023 TSC_hg19_v1_chr8_+_92082548 BX647772 AK293843 BC029760 AK310823 AK291646 AF151836	-183197	+	D14289 NM_175636	764174	-	TSC_hg19_v1_chr8_-_93074863 S82690	809188	-	D43638 NM_004349	809479	-	AJ413229|SLC26A7|115111|solute carrier family 26, member 7##NM_052832|SLC26A7|115111|solute carrier family 26, member 7##NM_134266|SLC26A7|115111|solute carrier family 26, member 7##AF331521|SLC26A7|115111|solute carrier family 26, member 7##AJ413228|SLC26A7|115111|solute carrier family 26, member 7##AJ413230|SLC26A7|115111|solute carrier family 26, member 7##AK097393|LRRC69|100130742|leucine rich repeat containing 69##NM_001129890|LRRC69|100130742|leucine rich repeat containing 69##AK130865|LRRC69|100130742|leucine rich repeat containing 69##NM_016023|OTUD6B|51633|OTU domain containing 6B##BX647772|OTUD6B|51633|OTU domain containing 6B##AK293843|OTUD6B|51633|OTU domain containing 6B##BC029760|OTUD6B|51633|OTU domain containing 6B##AK310823|OTUD6B|51633|OTU domain containing 6B##AK291646|OTUD6B|51633|OTU domain containing 6B##AF151836|OTUD6B|51633|OTU domain containing 6B##D14289|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_175636|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##D43638|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_004349|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	0.186532	
chr14	24740740	24740818	reg1023292.p1	4.458	+	TSC_hg19_v1_chr14_-_24740748 NM_004581 BC003093	-21	-	AK292613 Y08200 TSC_hg19_v1_chr14_-_24740672 AK308715	-133	-	TSC_hg19_v1_chr14_+_24740427 AB593166	-342	+	TSC_hg19_v1_chr14_-_24740785 AK291347	4	-	TSC_hg19_v1_chr14_-_24740802 NM_182836	18	-	AK058159 NM_138452	27886	-	NM_004581|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##BC003093|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##AK292613|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##Y08200|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##AK308715|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##AK291347|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##NM_182836|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit##AK058159|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1##NM_138452|DHRS1|115817|dehydrogenase/reductase (SDR family) member 1	0.067001	
chr17	29153134	29153225	reg1027815.p2	4.458	+	TSC_hg19_v1_chr17_-_29151725 AK313315 NM_015986	-1416	-	TSC_hg19_v1_chr17_-_29151711 DQ298450 DQ892276 CU692798 AK296238 AF046059 BC023567	-1504	-	TSC_hg19_v1_chr17_+_29058664 BC047718	-94491	+	TSC_hg19_v1_chr17_+_29158987 AL832103 BC015051 AJ314648 AY557611 NM_024857	5806	+	CU692922 TSC_hg19_v1_chr17_-_29233257 AJ314645 AK026382 AK225474 BC024328 AK298495 NM_024683	80072	-	AK074196 AJ238994 AJ242782 NM_018404 TSC_hg19_v1_chr17_+_29248960 AK074204 AK222526 AJ272195 BC033758 DQ288859	95653	+	AK313315|CRLF3|51379|cytokine receptor-like factor 3##NM_015986|CRLF3|51379|cytokine receptor-like factor 3##DQ298450|CRLF3|51379|cytokine receptor-like factor 3##DQ892276|CRLF3|51379|cytokine receptor-like factor 3##AK296238|CRLF3|51379|cytokine receptor-like factor 3##AF046059|CRLF3|51379|cytokine receptor-like factor 3##BC023567|CRLF3|51379|cytokine receptor-like factor 3##BC047718|SUZ12P|440423|suppressor of zeste 12 homolog pseudogene##AL832103|ATAD5|79915|ATPase family, AAA domain containing 5##BC015051|ATAD5|79915|ATPase family, AAA domain containing 5##AJ314648|ATAD5|79915|ATPase family, AAA domain containing 5##AY557611|ATAD5|79915|ATPase family, AAA domain containing 5##NM_024857|ATAD5|79915|ATPase family, AAA domain containing 5##AJ314645|C17orf42|79736|chromosome 17 open reading frame 42##AK026382|C17orf42|79736|chromosome 17 open reading frame 42##AK225474|C17orf42|79736|chromosome 17 open reading frame 42##BC024328|C17orf42|79736|chromosome 17 open reading frame 42##AK298495|C17orf42|79736|chromosome 17 open reading frame 42##NM_024683|C17orf42|79736|chromosome 17 open reading frame 42##AK074196|ADAP2|55803|ArfGAP with dual PH domains 2##AJ238994|ADAP2|55803|ArfGAP with dual PH domains 2##AJ242782|ADAP2|55803|ArfGAP with dual PH domains 2##NM_018404|ADAP2|55803|ArfGAP with dual PH domains 2##AK074204|ADAP2|55803|ArfGAP with dual PH domains 2##AK222526|ADAP2|55803|ArfGAP with dual PH domains 2##AJ272195|ADAP2|55803|ArfGAP with dual PH domains 2##BC033758|ADAP2|55803|ArfGAP with dual PH domains 2##DQ288859|ADAP2|55803|ArfGAP with dual PH domains 2	0.924518	CTCF.p2:-6:0.925
chr4	185064998	185065129	reg1028384.p2	4.458	+	TSC_hg19_v1_chr4_+_184827885 AB384196	-237152	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-237243	+	TSC_hg19_v1_chr4_+_184826513 AB037813 BC146754 NM_020225	-238557	+	BC035035 AY358676 AK057370 NM_153343	74002	-	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	330618	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	505538	-	AK289840|STOX2|56977|storkhead box 2##AB037813|STOX2|56977|storkhead box 2##BC146754|STOX2|56977|storkhead box 2##NM_020225|STOX2|56977|storkhead box 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase	0.011914	
chr5	157247802	157247904	reg1026658.p1	4.458	+	AK055297 TSC_hg19_v1_chr5_+_157184422	-63473	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-77113	+	AY463216 NM_017872 TSC_hg19_v1_chr5_+_157158427 AK000553 AK223119 AK304590 BC023521 AL136669 AK021663 AB528251 AM392629 CR533503 BC001523 BC001852 CU674750	-89425	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	38237	-	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	1278604	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	1278889	-	BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AY463216|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##NM_017872|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK000553|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK223119|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK304590|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC023521|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AL136669|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK021663|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##CR533503|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001523|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001852|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1	0.0	
chr6	33670303	33670405	reg1032569.p1	4.458	+	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	-81160	+	TSC_hg19_v1_chr6_-_33548037 AK303422 AK293547 NM_001188	-122311	-	U23765 U16811 TSC_hg19_v1_chr6_-_33547998 X84213 BC004431 BC032789 BC110337 AK091807 AK292093	-122439	-	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	9109	-	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	9159	-	AK056586 AK223572 AK289935 BC089389 NM_001142883 NM_054111	44367	-	D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##AK303422|BAK1|578|BCL2-antagonist/killer 1##AK293547|BAK1|578|BCL2-antagonist/killer 1##NM_001188|BAK1|578|BCL2-antagonist/killer 1##U23765|BAK1|578|BCL2-antagonist/killer 1##U16811|BAK1|578|BCL2-antagonist/killer 1##X84213|BAK1|578|BCL2-antagonist/killer 1##BC004431|BAK1|578|BCL2-antagonist/killer 1##BC032789|BAK1|578|BCL2-antagonist/killer 1##BC110337|BAK1|578|BCL2-antagonist/killer 1##AK091807|BAK1|578|BCL2-antagonist/killer 1##AK292093|BAK1|578|BCL2-antagonist/killer 1##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125##AK056586|IP6K3|117283|inositol hexakisphosphate kinase 3##AK223572|IP6K3|117283|inositol hexakisphosphate kinase 3##AK289935|IP6K3|117283|inositol hexakisphosphate kinase 3##BC089389|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_001142883|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_054111|IP6K3|117283|inositol hexakisphosphate kinase 3	0.0	
chr11	8114349	8114456	reg1029777.p2	4.457	+	TSC_hg19_v1_chr11_+_8102754 NM_177972 U54644	-11603	+	NM_003320 U82467	-54223	+	AK293528 TSC_hg19_v1_chr11_+_8040820	-73597	+	AM422214 AY326435 AK315379 AL832601 AK293933 AK296505 AY358475 BC022455 AY326436 TSC_hg19_v1_chr11_-_8190573 BX647514 NM_001135109 NM_001206671 NM_001206672 NM_024557	76161	-	BC069752 BC069793 M26682 NM_002315	170950	-	AK093251 AX748014 BC031231 NM_030906	501055	-	NM_177972|TUB|7275|tubby homolog (mouse)##U54644|TUB|7275|tubby homolog (mouse)##NM_003320|TUB|7275|tubby homolog (mouse)##U82467|TUB|7275|tubby homolog (mouse)##AK293528|TUB|7275|tubby homolog (mouse)##AM422214|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326435|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK315379|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AL832601|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK293933|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AK296505|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY358475|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC022455|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##AY326436|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BX647514|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001135109|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206671|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_001206672|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##NM_024557|RIC3|79608|resistance to inhibitors of cholinesterase 3 homolog (C. elegans)##BC069752|LMO1|4004|LIM domain only 1 (rhombotin 1)##BC069793|LMO1|4004|LIM domain only 1 (rhombotin 1)##M26682|LMO1|4004|LIM domain only 1 (rhombotin 1)##NM_002315|LMO1|4004|LIM domain only 1 (rhombotin 1)##AK093251|STK33|65975|serine/threonine kinase 33##BC031231|STK33|65975|serine/threonine kinase 33##NM_030906|STK33|65975|serine/threonine kinase 33	0.997508	CTCF.p2:-19:0.998
chr1	216735860	216735964	reg1033618.p2	4.457	+	AF055580 AY481573 NM_007123 NM_206933	-139175	-	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	-995049	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	-1479302	+	HQ692853 AF117255 BC008218 AY388456 AK291647 TSC_hg19_v1_chr1_-_216896791 AB020639 AK290945 BC064700 NM_001243515 NM_001243518 NM_001243519 NM_001438	160814	-	AY388461 NM_001243514	242796	-	AY388459 AY388458 NM_001243512 NM_001243513 AY388457 AY388460 NM_001243510 NM_001243511	377099	-	AF055580|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##AY481573|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_007123|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_206933|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##HQ692853|ESRRG|2104|estrogen-related receptor gamma##AF117255|ESRRG|2104|estrogen-related receptor gamma##BC008218|ESRRG|2104|estrogen-related receptor gamma##AY388456|ESRRG|2104|estrogen-related receptor gamma##AK291647|ESRRG|2104|estrogen-related receptor gamma##AB020639|ESRRG|2104|estrogen-related receptor gamma##AK290945|ESRRG|2104|estrogen-related receptor gamma##BC064700|ESRRG|2104|estrogen-related receptor gamma##NM_001243515|ESRRG|2104|estrogen-related receptor gamma##NM_001243518|ESRRG|2104|estrogen-related receptor gamma##NM_001243519|ESRRG|2104|estrogen-related receptor gamma##NM_001438|ESRRG|2104|estrogen-related receptor gamma##AY388461|ESRRG|2104|estrogen-related receptor gamma##NM_001243514|ESRRG|2104|estrogen-related receptor gamma##AY388459|ESRRG|2104|estrogen-related receptor gamma##AY388458|ESRRG|2104|estrogen-related receptor gamma##NM_001243512|ESRRG|2104|estrogen-related receptor gamma##NM_001243513|ESRRG|2104|estrogen-related receptor gamma##AY388457|ESRRG|2104|estrogen-related receptor gamma##AY388460|ESRRG|2104|estrogen-related receptor gamma##NM_001243510|ESRRG|2104|estrogen-related receptor gamma##NM_001243511|ESRRG|2104|estrogen-related receptor gamma	0.740428	CTCF.p2:15:0.740
chr16	21566470	21566561	reg1000610.p2	4.457	+	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	-34763	-	BC036263 NM_130464	-129858	-	BX648477 NM_001014444 NM_001888	-252128	-	TSC_hg19_v1_chr16_+_21610912 NM_001077180 NM_016025 AJ278577 AJ278578 AK074529 BC000195 AK313077 AK075022 AK075237	44375	+	AF151839 TSC_hg19_v1_chr16_+_21611174	44639	+	TSC_hg19_v1_chr16_-_21663930 DQ892013 DQ895202 EU176227 EU176324 AK313860 AK223286 AK290910 AK293703 BC017844	97405	-	BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BX648477|CRYM|1428|crystallin, mu##NM_001014444|CRYM|1428|crystallin, mu##NM_001888|CRYM|1428|crystallin, mu##NM_001077180|METTL9|51108|methyltransferase like 9##NM_016025|METTL9|51108|methyltransferase like 9##AJ278577|METTL9|51108|methyltransferase like 9##AJ278578|METTL9|51108|methyltransferase like 9##AK074529|METTL9|51108|methyltransferase like 9##BC000195|METTL9|51108|methyltransferase like 9##AK313077|METTL9|51108|methyltransferase like 9##AK075022|METTL9|51108|methyltransferase like 9##AK075237|METTL9|51108|methyltransferase like 9##AF151839|METTL9|51108|methyltransferase like 9##DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6##DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6##EU176227|IGSF6|10261|immunoglobulin superfamily, member 6##EU176324|IGSF6|10261|immunoglobulin superfamily, member 6##AK313860|IGSF6|10261|immunoglobulin superfamily, member 6##AK223286|IGSF6|10261|immunoglobulin superfamily, member 6##AK290910|IGSF6|10261|immunoglobulin superfamily, member 6##AK293703|IGSF6|10261|immunoglobulin superfamily, member 6##BC017844|IGSF6|10261|immunoglobulin superfamily, member 6	0.0	
chr17	17712608	17712732	reg1031427.p2	4.457	+	TSC_hg19_v1_chr17_+_17608164 AF147359	-104472	+	TSC_hg19_v1_chr17_+_17584772 AB058723 AY172136 NM_030665	-127885	+	TSC_hg19_v1_chr17_-_17495007 CU690728 AF044214 AF113126 BC000557 BC050593 NM_148172 AK302251	-217695	-	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	14234	-	TSC_hg19_v1_chr17_-_17740301 U00968 BC063281	27625	-	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	27654	-	AB058723|RAI1|10743|retinoic acid induced 1##AY172136|RAI1|10743|retinoic acid induced 1##NM_030665|RAI1|10743|retinoic acid induced 1##AF044214|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF113126|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC000557|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC050593|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_148172|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AK302251|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1##U00968|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC063281|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1	0.0	
chr17	20946929	20947109	reg1032978.p1	4.457	+	TSC_hg19_v1_chr17_-_20946322 AB590105 AB028986 NM_015276	-747	-	CU686685 BC068597 NM_001004306	-147627	-	AK057473 TSC_hg19_v1_chr17_+_20771859 BC041488 EF565107	-175214	+	TSC_hg19_v1_chr17_+_20978860 AB593144	31862	+	TSC_hg19_v1_chr17_+_21030251 NM_015510 AL117567 AF151851 BC004126 BC009679 AK124055 CR457124	83257	+	TSC_hg19_v1_chr17_-_21117475 BT006768 AK311965 BC020815	170435	-	AB028986|USP22|23326|ubiquitin specific peptidase 22##NM_015276|USP22|23326|ubiquitin specific peptidase 22##BC068597|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001004306|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_015510|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AL117567|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AF151851|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC004126|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC009679|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AK124055|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##CR457124|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BT006768|TMEM11|8834|transmembrane protein 11##AK311965|TMEM11|8834|transmembrane protein 11##BC020815|TMEM11|8834|transmembrane protein 11	0.0	
chr19	2096933	2097025	reg1026907.p3	4.457	+	TSC_hg19_v1_chr19_+_2096982 CU677067 DQ424900 AK294083	-16	+	TSC_hg19_v1_chr19_+_2096913 AY358444 NM_001031735 NM_001039846 DQ196309 DQ196310 AK301957 AY753639 BC014609 BC040964 BC010443	-119	+	TSC_hg19_v1_chr19_-_2096297 AL832474	-685	-	CU679595 AB384738 BC005142 TSC_hg19_v1_chr19_-_2151519	54446	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	54563	-	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	54574	-	DQ424900|IZUMO4|113177|IZUMO family member 4##AK294083|IZUMO4|113177|IZUMO family member 4##AY358444|IZUMO4|113177|IZUMO family member 4##NM_001031735|IZUMO4|113177|IZUMO family member 4##NM_001039846|IZUMO4|113177|IZUMO family member 4##DQ196309|IZUMO4|113177|IZUMO family member 4##DQ196310|IZUMO4|113177|IZUMO family member 4##AK301957|IZUMO4|113177|IZUMO family member 4##AY753639|IZUMO4|113177|IZUMO family member 4##BC014609|IZUMO4|113177|IZUMO family member 4##BC040964|IZUMO4|113177|IZUMO family member 4##BC010443|IZUMO4|113177|IZUMO family member 4##AL832474|MOB3A|126308|MOB kinase activator 3A##BC005142|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit	0.134193	
chr19	54606211	54606392	reg1024319.p2	4.457	+	TSC_hg19_v1_chr19_+_54606162 AF070653 BC061644 NM_004542 AK289489 BC011021 BC022369 AF044955 CR542143	-135	+	TSC_hg19_v1_chr19_-_54604114 AF391163 AF474153 DQ893697 DQ894733 AF391162 AK091111 AX746784 AK311307 AK130199 AF391164 AF474152 AF251702 NM_130771 NM_133168 NM_133169 NM_206818	-2182	-	DQ479398 NM_001135686	-21668	-	NM_015629 DQ426885 AY040822 BC117389	12526	+	AK310647 AF052052 AK310627 NM_013342	12738	-	TSC_hg19_v1_chr19_+_54619133 AK301709 AB593025	12829	+	AF070653|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##BC061644|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##NM_004542|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##AK289489|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##BC011021|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##BC022369|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##AF044955|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##CR542143|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##AF391163|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF474153|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##DQ893697|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##DQ894733|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF391162|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK091111|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK311307|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK130199|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF391164|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF474152|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF251702|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_130771|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_133168|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_133169|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_206818|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##DQ479398|TARM1|441864|T cell-interacting, activating receptor on myeloid cells 1##NM_001135686|TARM1|441864|T cell-interacting, activating receptor on myeloid cells 1##NM_015629|PRPF31|26121|PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae)##AY040822|PRPF31|26121|PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae)##BC117389|PRPF31|26121|PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae)##AK310647|TFPT|29844|TCF3 (E2A) fusion partner (in childhood Leukemia)##AF052052|TFPT|29844|TCF3 (E2A) fusion partner (in childhood Leukemia)##AK310627|TFPT|29844|TCF3 (E2A) fusion partner (in childhood Leukemia)##NM_013342|TFPT|29844|TCF3 (E2A) fusion partner (in childhood Leukemia)##AK301709|PRPF31|26121|PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae)##AB593025|PRPF31|26121|PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae)	0.0	
chr20	52368002	52368182	reg1028586.p2	4.457	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-157293	-	AF041259 NM_006526	-168457	-	AK302570 NM_001193421	-566271	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	318970	-	AK315220 NM_003657	319211	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	422428	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.844562	CTCF.p2:29:0.845
chr5	15683507	15683609	reg1031386.p1	4.457	+	TSC_hg19_v1_chr5_+_15500770 AF199356 AB463041	-182782	+	BC075061 TSC_hg19_v1_chr5_+_15500760	-182810	+	BC136424 TSC_hg19_v1_chr5_+_15500549	-183014	+	NM_001102562	496338	-	TSC_hg19_v1_chr5_-_16465884 BC010545 BC008752 NM_033414 AY046059	782318	-	NM_019000	825548	-	AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC075061|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_001102562|MARCH11|441061|membrane-associated ring finger (C3HC4) 11##BC010545|ZNF622|90441|zinc finger protein 622##BC008752|ZNF622|90441|zinc finger protein 622##NM_033414|ZNF622|90441|zinc finger protein 622##AY046059|ZNF622|90441|zinc finger protein 622##NM_019000|FAM134B|54463|family with sequence similarity 134, member B	0.0	
chr17	27546351	27546499	reg1002224.p1	4.456	+	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	-39075	-	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	-79014	-	AK054958 NM_004740	-143799	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	27452	+	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	74685	-	TSC_hg19_v1_chr17_-_27621167 AK293075 NM_020772	74740	-	CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2	0.0	
chr17	30530605	30530717	reg1033936.p2	4.456	+	TSC_hg19_v1_chr17_+_30469588 BC092401 BC068463 AY094972 BC125104 BC125105 AL136929 BC029029 AK294407 AB527368 AM393207 BC146694 AJ517412	-61022	+	TSC_hg19_v1_chr17_+_30469544 BC110895	-61116	+	TSC_hg19_v1_chr17_+_30469520 BC041114	-61139	+	AJ313480 BC100975 BC100976 BC100978 NM_138328 BC100977	62533	+	TSC_hg19_v1_chr17_-_30669193 AF052093 CU691078 BC054035 BC047325 BC026017 BC035715 AF305686 NM_022344	138546	-	TSC_hg19_v1_chr17_+_30677175 BC002372 NM_001032293 NM_001098507 NM_003457	146495	+	BC092401|RHOT1|55288|ras homolog gene family, member T1##BC068463|RHOT1|55288|ras homolog gene family, member T1##AY094972|RHOT1|55288|ras homolog gene family, member T1##BC125104|RHOT1|55288|ras homolog gene family, member T1##BC125105|RHOT1|55288|ras homolog gene family, member T1##AL136929|RHOT1|55288|ras homolog gene family, member T1##BC029029|RHOT1|55288|ras homolog gene family, member T1##AK294407|RHOT1|55288|ras homolog gene family, member T1##AM393207|RHOT1|55288|ras homolog gene family, member T1##BC146694|RHOT1|55288|ras homolog gene family, member T1##AJ517412|RHOT1|55288|ras homolog gene family, member T1##BC110895|RHOT1|55288|ras homolog gene family, member T1##BC041114|RHOT1|55288|ras homolog gene family, member T1##AJ313480|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC100975|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC100976|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC100978|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##NM_138328|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##BC100977|RHBDL3|162494|rhomboid, veinlet-like 3 (Drosophila)##AF052093|C17orf75|64149|chromosome 17 open reading frame 75##BC054035|C17orf75|64149|chromosome 17 open reading frame 75##BC047325|C17orf75|64149|chromosome 17 open reading frame 75##BC026017|C17orf75|64149|chromosome 17 open reading frame 75##BC035715|C17orf75|64149|chromosome 17 open reading frame 75##AF305686|C17orf75|64149|chromosome 17 open reading frame 75##NM_022344|C17orf75|64149|chromosome 17 open reading frame 75##BC002372|ZNF207|7756|zinc finger protein 207##NM_001032293|ZNF207|7756|zinc finger protein 207##NM_001098507|ZNF207|7756|zinc finger protein 207##NM_003457|ZNF207|7756|zinc finger protein 207	0.994326	CTCF.p2:-22:0.994
chr1	89449686	89449794	reg1033170.p2	4.456	+	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	-92467	-	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	-92529	-	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	-299645	+	TSC_hg19_v1_chr1_-_89458288 AL833593 BC012942 CR627392 AK301326 AK315917 AK057176 AY028624	8619	-	NM_001008661 NM_001008662 NM_001162536 NM_019610	8902	-	JF927951 BC140837 BC144650 BC063819 CR936758 AK001823 BC017992 AK309096 AL136680 CR936755 NM_018284	38740	-	AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AL833593|CCBL2|56267|cysteine conjugate-beta lyase 2##BC012942|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##CR627392|CCBL2|56267|cysteine conjugate-beta lyase 2##AK301326|CCBL2|56267|cysteine conjugate-beta lyase 2##AK315917|CCBL2|56267|cysteine conjugate-beta lyase 2##AK057176|CCBL2|56267|cysteine conjugate-beta lyase 2##AY028624|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001008661|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001008662|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001162536|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##NM_019610|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##JF927951|GBP3|2635|guanylate binding protein 3##BC140837|GBP3|2635|guanylate binding protein 3##BC144650|GBP3|2635|guanylate binding protein 3##BC063819|GBP3|2635|guanylate binding protein 3##CR936758|GBP3|2635|guanylate binding protein 3##AK001823|GBP3|2635|guanylate binding protein 3##BC017992|GBP3|2635|guanylate binding protein 3##AK309096|GBP3|2635|guanylate binding protein 3##AL136680|GBP3|2635|guanylate binding protein 3##CR936755|GBP3|2635|guanylate binding protein 3##NM_018284|GBP3|2635|guanylate binding protein 3	0.999021	CTCF.p2:-18:0.999
chr20	44643108	44643289	reg1005994.p3	4.456	+	TSC_hg19_v1_chr20_+_44637546 AK298246 AK301446 AK311648 AK313137 AK316145 J05070 NM_004994 AK303080 BC006093 DQ896791 EU176415 AB528343 CU675241	-5646	+	TSC_hg19_v1_chr20_-_44600992 AK296989	-42205	-	TSC_hg19_v1_chr20_-_44600828 AF395833 BC041331 BC142981 NM_022095	-42388	-	TSC_hg19_v1_chr20_+_44650321 NM_001134771	7122	+	TSC_hg19_v1_chr20_+_44657824 NM_020708 AK098371	14625	+	TSC_hg19_v1_chr20_+_44657861 AK289758 AK296331 AK294059 BC132668 BC132670 AK295096 AF208159 AB033002	14733	+	AK298246|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK301446|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK313137|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK316145|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##J05070|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##NM_004994|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK303080|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##BC006093|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##DQ896791|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##EU176415|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK296989|ZNF335|63925|zinc finger protein 335##AF395833|ZNF335|63925|zinc finger protein 335##BC041331|ZNF335|63925|zinc finger protein 335##BC142981|ZNF335|63925|zinc finger protein 335##NM_022095|ZNF335|63925|zinc finger protein 335##NM_001134771|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##NM_020708|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK098371|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK289758|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK296331|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK294059|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC132668|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC132670|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK295096|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AF208159|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AB033002|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5	0.0	
chr20	57583163	57583343	reg1023125.p2	4.456	+	TSC_hg19_v1_chr20_-_57582305 AK314931 NM_001336	-948	-	AF009923 BT019915 CU692072 AM392668 AB528116 AF073890 AF136273 BC025419 BC042168 TSC_hg19_v1_chr20_-_57582302	-1026	-	TSC_hg19_v1_chr20_+_57556329 BC014952 BX647417 AJ238379 AF161479 AB528731 AK023927 AK023310 AK001316	-26904	+	AJ292757 NM_030773	11055	+	BT007293 TSC_hg19_v1_chr20_-_57607361 BC003671 BC001690 AK315493 AK026556 AF077045 AF052955 BC105811 NM_006886	24110	-	TSC_hg19_v1_chr20_-_57617873 AK314449 AK002157 BC010649 BC013969 AF151865 AK298135 NM_016045	34615	-	AK314931|CTSZ|1522|cathepsin Z##NM_001336|CTSZ|1522|cathepsin Z##AF009923|CTSZ|1522|cathepsin Z##BT019915|CTSZ|1522|cathepsin Z##AM392668|CTSZ|1522|cathepsin Z##AF073890|CTSZ|1522|cathepsin Z##AF136273|CTSZ|1522|cathepsin Z##BC025419|CTSZ|1522|cathepsin Z##BC042168|CTSZ|1522|cathepsin Z##BC014952|TH1L|51497|TH1-like (Drosophila)##BX647417|TH1L|51497|TH1-like (Drosophila)##AJ238379|TH1L|51497|TH1-like (Drosophila)##AF161479|TH1L|51497|TH1-like (Drosophila)##AK023927|TH1L|51497|TH1-like (Drosophila)##AK023310|TH1L|51497|TH1-like (Drosophila)##AK001316|TH1L|51497|TH1-like (Drosophila)##AJ292757|TUBB1|81027|tubulin, beta 1 class VI##NM_030773|TUBB1|81027|tubulin, beta 1 class VI##BT007293|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC003671|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC001690|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK315493|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK026556|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF077045|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF052955|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC105811|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##NM_006886|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK314449|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK002157|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC010649|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC013969|SLMO2|51012|slowmo homolog 2 (Drosophila)##AF151865|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK298135|SLMO2|51012|slowmo homolog 2 (Drosophila)##NM_016045|SLMO2|51012|slowmo homolog 2 (Drosophila)	0.0	
chr22	50247042	50247211	reg1026823.p2	4.456	+	TSC_hg19_v1_chr22_-_50221517 AK304776	-25645	-	AK292428 TSC_hg19_v1_chr22_-_50221332 BC030007 BC047508	-25860	-	AF005067 NM_014577	-28675	-	TSC_hg19_v1_chr22_+_50247506 NM_014838	367	+	AB014537 BC167155 TSC_hg19_v1_chr22_+_50247533	406	+	TSC_hg19_v1_chr22_-_50312087 BC001729 AJ290427 AJ303120 BC098562 AF318343	64889	-	AK304776|BRD1|23774|bromodomain containing 1##AK292428|BRD1|23774|bromodomain containing 1##BC030007|BRD1|23774|bromodomain containing 1##BC047508|BRD1|23774|bromodomain containing 1##AF005067|BRD1|23774|bromodomain containing 1##NM_014577|BRD1|23774|bromodomain containing 1##NM_014838|ZBED4|9889|zinc finger, BED-type containing 4##AB014537|ZBED4|9889|zinc finger, BED-type containing 4##BC167155|ZBED4|9889|zinc finger, BED-type containing 4##BC001729|ALG12|79087|asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae)##AJ290427|ALG12|79087|asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae)##AJ303120|ALG12|79087|asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae)##BC098562|ALG12|79087|asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae)##AF318343|ALG12|79087|asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae)	0.0	
chr2	47355150	47355248	reg1030232.p2	4.456	+	TSC_hg19_v1_chr2_-_47168913 NM_001171508 NM_001171511	-186252	-	AK292127 TSC_hg19_v1_chr2_-_47168875 AK293889	-186326	-	TSC_hg19_v1_chr2_+_47168400 BC047709 BC111487	-186796	+	AK097491 NM_001163561 NM_173649	27271	-	TSC_hg19_v1_chr2_-_47403624 M19311 BC003354 BC006464	48427	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	48451	-	NM_001171508|MCFD2|90411|multiple coagulation factor deficiency 2##NM_001171511|MCFD2|90411|multiple coagulation factor deficiency 2##AK292127|MCFD2|90411|multiple coagulation factor deficiency 2##AK293889|MCFD2|90411|multiple coagulation factor deficiency 2##BC111487|TTC7A|57217|tetratricopeptide repeat domain 7A##AK097491|C2orf61|285051|chromosome 2 open reading frame 61##NM_001163561|C2orf61|285051|chromosome 2 open reading frame 61##NM_173649|C2orf61|285051|chromosome 2 open reading frame 61##M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	0.015551	
chr4	114276921	114277091	reg1022712.p2	4.456	+	TSC_hg19_v1_chr4_+_114214102 AK294720	-62887	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	-306172	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-537705	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	405275	-	TSC_hg19_v1_chr4_-_114682341 AK294517	405350	-	BC022558 TSC_hg19_v1_chr4_-_114682567	405560	-	AK294720|ANK2|287|ankyrin 2, neuronal##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK294517|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC022558|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.0	
chr8	66346	66443	reg1032674.p1	4.456	+	None	None	None	None	None	None	None	None	None	NM_001005504	50629	-	AK127000 TSC_hg19_v1_chr8_-_182246 BC064938 BC052779	115878	-	NM_173539 AK093442 AX748129 TSC_hg19_v1_chr8_+_182396 AK313454 NM_001042415 NM_001042416 BC026190	115948	+	NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21##AK127000|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC064938|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC052779|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##NM_173539|ZNF596|169270|zinc finger protein 596##AK313454|ZNF596|169270|zinc finger protein 596##NM_001042415|ZNF596|169270|zinc finger protein 596##NM_001042416|ZNF596|169270|zinc finger protein 596##BC026190|ZNF596|169270|zinc finger protein 596	0.168637	
chr1	112135635	112135816	reg1028966.p2	4.455	+	BC041707 BC064411 NM_001081976	-29146	-	NM_000677 NM_020683	-88983	-	TSC_hg19_v1_chr1_+_112016601 BC017973 NM_174896	-119127	+	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	26742	+	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	146230	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	162494	+	BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##BC017973|C1orf162|128346|chromosome 1 open reading frame 162##NM_174896|C1orf162|128346|chromosome 1 open reading frame 162##NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	0.0	
chr12	26555697	26555842	reg1034399.p1	4.455	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-207184	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-207478	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	-277848	-	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	430311	-	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	535140	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	535461	-	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)	0.755536	CTCF.p2:-3:0.756
chr16	11347394	11347575	reg1011294.p1	4.455	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-309041	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-311249	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-311318	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	2566	-	X63758 BC096135 BC096136 BC096137 NM_005425	15654	-	NM_021247	19967	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr17	56415368	56415520	reg1032490.p2	4.455	+	TSC_hg19_v1_chr17_+_56414668 AK000271 BC050403 BC032475	-755	+	AK311306 TSC_hg19_v1_chr17_+_56414566 BC064565	-875	+	AX721088 TSC_hg19_v1_chr17_-_56409882	-5567	-	AB527904 CR407663 EU446710 TSC_hg19_v1_chr17_-_56429531 AK311986 U38817 BC002802 U38818 NM_003168 U43923 AK129758	14092	-	AB527734 TSC_hg19_v1_chr17_-_56492959 AK296769 AK000322 BC109028	77592	-	TSC_hg19_v1_chr17_-_56494896 CR749257	79449	-	AK000271|LOC100506779|100506779|uncharacterized LOC100506779##BC050403|LOC100506779|100506779|uncharacterized LOC100506779##BC032475|LOC100506779|100506779|uncharacterized LOC100506779##AK311306|LOC100506779|100506779|uncharacterized LOC100506779##BC064565|LOC100506779|100506779|uncharacterized LOC100506779##CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK296769|RNF43|54894|ring finger protein 43##AK000322|RNF43|54894|ring finger protein 43##BC109028|RNF43|54894|ring finger protein 43##CR749257|RNF43|54894|ring finger protein 43	0.0	
chr18	52903511	52903691	reg1029314.p1	4.455	+	AF273051 TSC_hg19_v1_chr18_-_52626693 BC029508 NM_025214	-276914	-	AK058097 NM_001143829	-278323	-	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	-407863	+	FR748222 NM_001243236	66181	-	M74718 FR748220 FR748221 AK300038 NM_001243234 NM_001243235	85401	-	FR748209 M74720 AB209741 TSC_hg19_v1_chr18_-_53068920 AK300636	165237	-	AF273051|CCDC68|80323|coiled-coil domain containing 68##BC029508|CCDC68|80323|coiled-coil domain containing 68##NM_025214|CCDC68|80323|coiled-coil domain containing 68##AK058097|CCDC68|80323|coiled-coil domain containing 68##NM_001143829|CCDC68|80323|coiled-coil domain containing 68##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family##FR748222|TCF4|6925|transcription factor 4##NM_001243236|TCF4|6925|transcription factor 4##M74718|TCF4|6925|transcription factor 4##FR748220|TCF4|6925|transcription factor 4##FR748221|TCF4|6925|transcription factor 4##AK300038|TCF4|6925|transcription factor 4##NM_001243234|TCF4|6925|transcription factor 4##NM_001243235|TCF4|6925|transcription factor 4##FR748209|TCF4|6925|transcription factor 4##AB209741|TCF4|6925|transcription factor 4##AK300636|TCF4|6925|transcription factor 4	0.0	
chr2	163989492	163989617	reg1032237.p1	4.455	+	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-294307	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-294430	-	TSC_hg19_v1_chr2_+_163200633 AK312349 M81637 BC005214 AB209768 AB529141 CU675051 AK295413	-788793	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	602963	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	1435450	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	1488339	-	BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK312349|GCA|25801|grancalcin, EF-hand calcium binding protein##M81637|GCA|25801|grancalcin, EF-hand calcium binding protein##BC005214|GCA|25801|grancalcin, EF-hand calcium binding protein##AB209768|GCA|25801|grancalcin, EF-hand calcium binding protein##AK295413|GCA|25801|grancalcin, EF-hand calcium binding protein##BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14	0.655459	CTCF.p2:12:0.655
chr2	172379709	172379843	reg1032807.p1	4.455	+	TSC_hg19_v1_chr2_+_172379020 NM_001127383 NM_024843 AK128495 AK316588 AL136693 BC016900 AK291731 AK027115 AK225459 BC065290 HQ257890	-821	+	AK301485 TSC_hg19_v1_chr2_+_172378762	-1017	+	TSC_hg19_v1_chr2_-_172374248 AB055776	-5530	-	TSC_hg19_v1_chr2_+_172543981 BX537412 AK055491 NM_001378 AK225759 BC091498 AY037160 AK308008 AK298561	164248	+	TSC_hg19_v1_chr2_+_172544264 AK096579 AK075323 AF250307 BC109375 AF134477 AK316119 BC015038	164515	+	AB527259 DQ891540 EU176607 TSC_hg19_v1_chr2_-_172750755 AK091071 BC016932 AJ496568 Y14494 AK022828 AK294638 NM_003705	371007	-	NM_001127383|CYBRD1|79901|cytochrome b reductase 1##NM_024843|CYBRD1|79901|cytochrome b reductase 1##AK128495|CYBRD1|79901|cytochrome b reductase 1##AK316588|CYBRD1|79901|cytochrome b reductase 1##AL136693|CYBRD1|79901|cytochrome b reductase 1##BC016900|CYBRD1|79901|cytochrome b reductase 1##AK291731|CYBRD1|79901|cytochrome b reductase 1##AK027115|CYBRD1|79901|cytochrome b reductase 1##AK225459|CYBRD1|79901|cytochrome b reductase 1##BC065290|CYBRD1|79901|cytochrome b reductase 1##HQ257890|CYBRD1|79901|cytochrome b reductase 1##AK301485|CYBRD1|79901|cytochrome b reductase 1##BX537412|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK055491|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##NM_001378|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK225759|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC091498|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AY037160|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK308008|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK298561|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK096579|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK075323|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF250307|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC109375|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF134477|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK316119|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC015038|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	0.0	
chr5	116017312	116017491	reg1022938.p1	4.455	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-106887	-	TSC_hg19_v1_chr5_+_115898220 D28352	-119177	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-596680	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2306837	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2389410	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2389764	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr5	149499084	149499190	reg1030499.p1	4.455	+	NM_005211 X03663	-6203	-	TSC_hg19_v1_chr5_-_149466188 BC047521 AK304491 M25786	-32904	-	TSC_hg19_v1_chr5_-_149466131 AB208819	-32991	-	M21616 TSC_hg19_v1_chr5_-_149535251 AK293093	36067	-	J03278 M30493 TSC_hg19_v1_chr5_-_149535344	36198	-	BC032224 AB209657 NM_002609 TSC_hg19_v1_chr5_-_149535428	36287	-	NM_005211|CSF1R|1436|colony stimulating factor 1 receptor##X03663|CSF1R|1436|colony stimulating factor 1 receptor##BC047521|CSF1R|1436|colony stimulating factor 1 receptor##AK304491|CSF1R|1436|colony stimulating factor 1 receptor##M25786|CSF1R|1436|colony stimulating factor 1 receptor##AB208819|CSF1R|1436|colony stimulating factor 1 receptor##M21616|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AK293093|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##J03278|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##M30493|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##BC032224|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AB209657|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##NM_002609|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide	0.885096	CTCF.p2:-5:0.885
chr7	139467528	139467607	reg1027033.p2	4.455	+	NM_001080511	-258894	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-299135	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-422553	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	10338	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	10472	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	61525	+	NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.0	
chr9	137299159	137299340	reg1032149.p2	4.455	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-80849	+	TSC_hg19_v1_chr9_+_137218317 BC063827 NM_002957	-80934	+	AJ011376 NM_052821 AB464354	-294295	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	234398	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	234561	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	473411	+	BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##BC063827|RXRA|6256|retinoid X receptor, alpha##NM_002957|RXRA|6256|retinoid X receptor, alpha##AJ011376|WDR5|11091|WD repeat domain 5##NM_052821|WDR5|11091|WD repeat domain 5##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##D90279|COL5A1|1289|collagen, type V, alpha 1##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	0.0	
chrX	27460650	27460780	reg1034664.p2	4.455	+	AK097561 BC067286 NM_173523	-1250159	+	NM_173699 BC029525 AK057361	-1304229	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-2426642	-	BC157859 NM_001136533	304210	+	AK057527 NM_182506 BC101307 BC101309 BC101310	365400	+	AK128123 NM_001017930	538850	-	AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##NM_139058|ARX|170302|aristaless related homeobox##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	0.197177	
chr10	75886970	75887051	reg1026409.p1	4.454	+	TSC_hg19_v1_chr10_+_75757873 AK304823 NM_003373 NM_014000 AK300280 AK296509 BC099919 BC039174 M33308 AB385172 DQ894680	-129104	+	BC049374 NM_001001791	-204476	-	AB208961 TSC_hg19_v1_chr10_+_75673428	-213623	+	TSC_hg19_v1_chr10_-_75910513 BC067127	23502	-	TSC_hg19_v1_chr10_-_75910561 AK315597 AK026983 AK299352 BC026232 NM_012095 NM_207012	23678	-	TSC_hg19_v1_chr10_+_75910978 NM_001202450 NM_006721 AK301590 U90338 U33936	23959	+	AK304823|VCL|7414|vinculin##NM_003373|VCL|7414|vinculin##NM_014000|VCL|7414|vinculin##AK300280|VCL|7414|vinculin##AK296509|VCL|7414|vinculin##BC039174|VCL|7414|vinculin##M33308|VCL|7414|vinculin##DQ894680|VCL|7414|vinculin##BC049374|C10orf55|414236|chromosome 10 open reading frame 55##NM_001001791|C10orf55|414236|chromosome 10 open reading frame 55##AB208961|PLAU|5328|plasminogen activator, urokinase##BC067127|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK315597|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK026983|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK299352|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##BC026232|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_012095|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_207012|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_001202450|ADK|132|adenosine kinase##NM_006721|ADK|132|adenosine kinase##AK301590|ADK|132|adenosine kinase##U90338|ADK|132|adenosine kinase##U33936|ADK|132|adenosine kinase	0.572031	CTCF.p2:5:0.572
chr20	30582964	30583093	reg1037533.p1	4.454	+	AY534245 NM_001011718 TSC_hg19_v1_chr20_+_30555960	-27139	+	TSC_hg19_v1_chr20_-_30539856 NM_030815 AY286301	-43157	-	TSC_hg19_v1_chr20_-_30539818 BC009334 AK312021	-43202	-	NM_080625 AK057090 BC030254	15220	+	TSC_hg19_v1_chr20_+_30640055 NM_001172129 NM_001172130 NM_001172131 NM_001172132 NM_001172133 NM_002110 AK289896 AK225819 AK290928 AK298726 AK026432 BC108930 BC108931 BC113854 BC114463 AK314335 BC073748 BC094847 BC014435	57018	+	TSC_hg19_v1_chr20_+_30697308 NM_014742	114341	+	AY534245|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_001011718|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_030815|PDRG1|81572|p53 and DNA-damage regulated 1##AY286301|PDRG1|81572|p53 and DNA-damage regulated 1##BC009334|PDRG1|81572|p53 and DNA-damage regulated 1##AK312021|PDRG1|81572|p53 and DNA-damage regulated 1##NM_080625|C20orf160|140706|chromosome 20 open reading frame 160##AK057090|C20orf160|140706|chromosome 20 open reading frame 160##BC030254|C20orf160|140706|chromosome 20 open reading frame 160##NM_001172129|HCK|3055|hemopoietic cell kinase##NM_001172130|HCK|3055|hemopoietic cell kinase##NM_001172131|HCK|3055|hemopoietic cell kinase##NM_001172132|HCK|3055|hemopoietic cell kinase##NM_001172133|HCK|3055|hemopoietic cell kinase##NM_002110|HCK|3055|hemopoietic cell kinase##AK289896|HCK|3055|hemopoietic cell kinase##AK225819|HCK|3055|hemopoietic cell kinase##AK290928|HCK|3055|hemopoietic cell kinase##AK298726|HCK|3055|hemopoietic cell kinase##AK026432|HCK|3055|hemopoietic cell kinase##BC108930|HCK|3055|hemopoietic cell kinase##BC108931|HCK|3055|hemopoietic cell kinase##BC113854|HCK|3055|hemopoietic cell kinase##BC114463|HCK|3055|hemopoietic cell kinase##AK314335|HCK|3055|hemopoietic cell kinase##BC073748|HCK|3055|hemopoietic cell kinase##BC094847|HCK|3055|hemopoietic cell kinase##BC014435|HCK|3055|hemopoietic cell kinase##NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4	0.0	
chr2	11586825	11586926	reg1010645.p1	4.454	+	TSC_hg19_v1_chr2_-_11484762 AB014519 NM_004850	-102130	-	AK301439 AK313402 TSC_hg19_v1_chr2_+_11295602	-291273	+	TSC_hg19_v1_chr2_+_11295592 AK001091	-291294	+	BC107740 TSC_hg19_v1_chr2_-_11606272 BC008348 BC062610 AK290413 AK293504	19369	-	TSC_hg19_v1_chr2_-_11606278 AK223407 AY083996 NM_198256	19411	-	AF245388 NM_014668	87366	+	AB014519|ROCK2|9475|Rho-associated, coiled-coil containing protein kinase 2##NM_004850|ROCK2|9475|Rho-associated, coiled-coil containing protein kinase 2##AK301439|PQLC3|130814|PQ loop repeat containing 3##AK313402|PQLC3|130814|PQ loop repeat containing 3##AK001091|PQLC3|130814|PQ loop repeat containing 3##BC107740|E2F6|1876|E2F transcription factor 6##BC008348|E2F6|1876|E2F transcription factor 6##BC062610|E2F6|1876|E2F transcription factor 6##AK290413|E2F6|1876|E2F transcription factor 6##AK293504|E2F6|1876|E2F transcription factor 6##AK223407|E2F6|1876|E2F transcription factor 6##AY083996|E2F6|1876|E2F transcription factor 6##NM_198256|E2F6|1876|E2F transcription factor 6##AF245388|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_014668|GREB1|9687|growth regulation by estrogen in breast cancer 1	0.0	
chr21	43688063	43688209	reg1038620.p1	4.454	+	AK298491 AF323664 NM_207174	-48168	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	-48843	+	AF323662 NM_207629	-51950	+	TSC_hg19_v1_chr21_+_43710190 AF038175	22077	+	L08044 DQ891963 DQ895153 L15203 BC017859 TSC_hg19_v1_chr21_-_43735520	47355	-	NM_003226 AF432265	47596	-	AK298491|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323664|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207174|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323662|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207629|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##L08044|TFF3|7033|trefoil factor 3 (intestinal)##DQ891963|TFF3|7033|trefoil factor 3 (intestinal)##DQ895153|TFF3|7033|trefoil factor 3 (intestinal)##L15203|TFF3|7033|trefoil factor 3 (intestinal)##BC017859|TFF3|7033|trefoil factor 3 (intestinal)##NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)	0.0	
chr3	102248434	102248532	reg1030182.p1	4.454	+	AY090780 NM_175056 BC143817	-94616	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-680109	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-701523	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	2837097	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	2837339	+	CR749655 TSC_hg19_v1_chr3_-_105421064	3172571	-	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.25438	CTCF.p2:19:0.254
chr6	134386998	134387110	reg1030239.p1	4.454	+	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	-13351	-	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	-112709	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	-113690	+	CU674630 Y10032 AF153609 BC001263 FM205710 TSC_hg19_v1_chr6_-_134496003 AK098509 AK295422 BX649005	108920	-	TSC_hg19_v1_chr6_-_134496010 NM_005627	108965	-	FM205707 TSC_hg19_v1_chr6_-_134496850	109807	-	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1##Y10032|SGK1|6446|serum/glucocorticoid regulated kinase 1##AF153609|SGK1|6446|serum/glucocorticoid regulated kinase 1##BC001263|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205710|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK098509|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK295422|SGK1|6446|serum/glucocorticoid regulated kinase 1##BX649005|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_005627|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205707|SGK1|6446|serum/glucocorticoid regulated kinase 1	0.289683	CTCF.p2:-18:0.290
chr8	108793865	108793974	reg1028912.p2	4.454	+	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	-283731	-	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	-1011475	-	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	-1055564	+	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	301955	-	AB527268 CR457029 CR542275 CU674376 CU677689 CU678957 DQ892278 DQ895478 BC000734 TSC_hg19_v1_chr8_-_109260938 U54562 U85947	467015	-	TSC_hg19_v1_chr8_-_109260947 BC017887 AK313186 BC005944 BC016706 BC021679 U94175 U62962 BC008419 NM_001568 AK310902	467066	-	U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1##AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2##CR457029|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR542275|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ892278|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ895478|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC000734|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U54562|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U85947|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC017887|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK313186|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC005944|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC016706|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC021679|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U94175|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U62962|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC008419|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##NM_001568|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK310902|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E	0.99883	CTCF.p2:10:0.999
chr9	114790616	114790796	reg1019775.p1	4.454	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-131239	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-131592	+	AL833535 NM_173521	-244931	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	146814	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	304581	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	305143	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chr10	31379734	31379914	reg1023014.p1	4.453	+	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	-59003	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	-91372	-	AF139543 BC066294 NM_183058	-461189	-	TSC_hg19_v1_chr10_+_31607451 BX647794	227612	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	228133	-	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	228309	+	BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1	0.0	
chr1	9327399	9327562	reg1007214.p2	4.453	+	CR749282 TSC_hg19_v1_chr1_+_9299950	-27542	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	-32563	+	TSC_hg19_v1_chr1_+_9294832 BC081559	-32665	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	25457	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	25489	+	TSC_hg19_v1_chr1_+_9415945 CU677397	88466	+	CR749282|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1	0.014591	
chr8	141687389	141687455	reg1035800.p2	4.453	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-41798	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-165859	+	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	-166030	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	323834	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	451315	+	AK128212 NM_001080431	551250	-	BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4	0.0	
chr9	114791246	114791427	reg1019775.p3	4.453	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-131869	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-132222	+	AL833535 NM_173521	-245561	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	146184	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	303951	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	304513	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chr9	134829824	134829942	reg1031425.p2	4.453	+	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	-214593	-	D21239 NM_005312	-216959	-	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	-244681	-	Z36848 AF104252 AF230382 DQ099387 AB527898 EU446747 TSC_hg19_v1_chr9_-_134955238 BC064608 BC070331	125266	-	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	125367	-	TSC_hg19_v1_chr9_+_135037083 AY358165	207208	+	EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##Z36848|MED27|9442|mediator complex subunit 27##AF104252|MED27|9442|mediator complex subunit 27##AF230382|MED27|9442|mediator complex subunit 27##DQ099387|MED27|9442|mediator complex subunit 27##EU446747|MED27|9442|mediator complex subunit 27##BC064608|MED27|9442|mediator complex subunit 27##BC070331|MED27|9442|mediator complex subunit 27##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AY358165|NTNG2|84628|netrin G2	0.941126	CTCF.p2:4:0.941
chr11	112453959	112454119	reg1026214.p1	4.452	+	AY364435 NM_001145024	-322457	-	TSC_hg19_v1_chr11_+_112097100 NM_000317 BC018029 D17400 AK310768 BC009686 AK307133 M97655 AM392676 AM393300 AM393668 DQ890961 DQ894133	-356912	+	NM_001037290 AK027801 AK297853 AB096252	-406934	+	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 TSC_hg19_v1_chr11_+_112831996 AK314589	377948	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	378092	+	X16841 TSC_hg19_v1_chr11_+_112832212	378167	+	AY364435|C11orf34|349633|chromosome 11 open reading frame 34##NM_001145024|C11orf34|349633|chromosome 11 open reading frame 34##NM_000317|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC018029|PTS|5805|6-pyruvoyltetrahydropterin synthase##D17400|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK310768|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC009686|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK307133|PTS|5805|6-pyruvoyltetrahydropterin synthase##M97655|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM392676|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393300|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393668|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ890961|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ894133|PTS|5805|6-pyruvoyltetrahydropterin synthase##NM_001037290|BCO2|83875|beta-carotene oxygenase 2##AK027801|BCO2|83875|beta-carotene oxygenase 2##AK297853|BCO2|83875|beta-carotene oxygenase 2##AB096252|BCO2|83875|beta-carotene oxygenase 2##NM_000615|NCAM1|4684|neural cell adhesion molecule 1##NM_001076682|NCAM1|4684|neural cell adhesion molecule 1##NM_001242607|NCAM1|4684|neural cell adhesion molecule 1##NM_001242608|NCAM1|4684|neural cell adhesion molecule 1##NM_181351|NCAM1|4684|neural cell adhesion molecule 1##AK314589|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1	0.0	
chr1	211798555	211798661	reg1029389.p2	4.452	+	TSC_hg19_v1_chr1_-_211752056 BC121015 BC121016 NM_021194	-46520	-	AB451467 TSC_hg19_v1_chr1_-_211752048	-46608	-	AF364518 TSC_hg19_v1_chr1_-_211751805	-46846	-	BT019729 CU688108 AB527570 AY045701 Z29066 AK223353 AK225522 AK303092 TSC_hg19_v1_chr1_-_211848968 U11050 BC043502 BC065932 BC052807 NM_001204182 NM_001204183 NM_002497	50300	-	BC034621 TSC_hg19_v1_chr1_-_212003681	205140	-	D86960 NM_014873 TSC_hg19_v1_chr1_-_212004119	205522	-	BC121015|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121016|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##NM_021194|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AF364518|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BT019729|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AY045701|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##Z29066|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK223353|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK225522|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK303092|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##U11050|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC043502|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC065932|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC052807|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204182|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204183|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_002497|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC034621|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	0.500594	CTCF.p2:95:0.487
chr15	72825483	72825577	reg1030235.p2	4.452	+	TSC_hg19_v1_chr15_+_72766706 AB209432 BC051877	-58814	+	TSC_hg19_v1_chr15_+_72766670 AJ243190 NM_005744 AK312715	-58863	+	AK131033 NM_001080462	-134870	+	NM_018652	121507	+	NM_001252678 NM_033028 TSC_hg19_v1_chr15_+_72978547 AK303706 AF359281 AK298922 AK314507 BX647855 BC027624 AK075321 AK302224 AB528022 DQ891519 DQ894709	153013	+	BC037410 TSC_hg19_v1_chr15_-_73051778	226184	-	AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##AK131033|TMEM202|338949|transmembrane protein 202##NM_001080462|TMEM202|338949|transmembrane protein 202##NM_018652|GOLGA6B|55889|golgin A6 family, member B##NM_001252678|BBS4|585|Bardet-Biedl syndrome 4##NM_033028|BBS4|585|Bardet-Biedl syndrome 4##AK303706|BBS4|585|Bardet-Biedl syndrome 4##AF359281|BBS4|585|Bardet-Biedl syndrome 4##AK298922|BBS4|585|Bardet-Biedl syndrome 4##AK314507|BBS4|585|Bardet-Biedl syndrome 4##BX647855|BBS4|585|Bardet-Biedl syndrome 4##BC027624|BBS4|585|Bardet-Biedl syndrome 4##AK075321|BBS4|585|Bardet-Biedl syndrome 4##AK302224|BBS4|585|Bardet-Biedl syndrome 4##DQ891519|BBS4|585|Bardet-Biedl syndrome 4##DQ894709|BBS4|585|Bardet-Biedl syndrome 4	0.0	
chr18	15028137	15028249	reg1031291.p1	4.452	+	AF269088 NM_001145029 BC028407	-279908	+	BC140940 BX649118 AK307658 NM_001137671	-484649	-	TSC_hg19_v1_chr18_+_14179298 BC127726	-848884	+	TSC_hg19_v1_chr18_-_18691640 AK307388	3663445	-	TSC_hg19_v1_chr18_-_18691765 AK057038 NM_005406	3663595	-	TSC_hg19_v1_chr18_+_18822192 AB051559 NM_001142966 BC125017	3794050	+	AF269088|ANKRD30B|374860|ankyrin repeat domain 30B##NM_001145029|ANKRD30B|374860|ankyrin repeat domain 30B##BC028407|ANKRD30B|374860|ankyrin repeat domain 30B##BC140940|POTEC|388468|POTE ankyrin domain family, member C##BX649118|POTEC|388468|POTE ankyrin domain family, member C##AK307658|POTEC|388468|POTE ankyrin domain family, member C##NM_001137671|POTEC|388468|POTE ankyrin domain family, member C##BC127726|ANKRD20A5P|440482|ankyrin repeat domain 20 family, member A5, pseudogene##AK307388|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AK057038|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##NM_005406|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AB051559|GREB1L|80000|growth regulation by estrogen in breast cancer-like##NM_001142966|GREB1L|80000|growth regulation by estrogen in breast cancer-like##BC125017|GREB1L|80000|growth regulation by estrogen in breast cancer-like	0.071266	
chr19	10496781	10496947	reg1027864.p1	4.452	+	TSC_hg19_v1_chr19_-_10491245 AK308360 NM_003331 AK303627 AK308379	-5585	-	TSC_hg19_v1_chr19_-_10491192 X54637 AK222672 BC014243	-5673	-	AF340060 AF340061 AB463787 BC040123 S50015 AK309643 BC058903 X69819 TSC_hg19_v1_chr19_-_10450307 AK301071 AX746321 X69711 BC034409 BC046121 AK312826 AK226023 NM_002162	-46555	-	AB463478 AM393285 AM393349 BT006796 CR542249 DQ892174 DQ895369 U43077 TSC_hg19_v1_chr19_-_10514182	17305	-	TSC_hg19_v1_chr19_-_10514219 BC000083 BC008793 U63131	17349	-	TSC_hg19_v1_chr19_-_10514250 NM_007065	17392	-	AK308360|TYK2|7297|tyrosine kinase 2##NM_003331|TYK2|7297|tyrosine kinase 2##AK303627|TYK2|7297|tyrosine kinase 2##AK308379|TYK2|7297|tyrosine kinase 2##X54637|TYK2|7297|tyrosine kinase 2##AK222672|TYK2|7297|tyrosine kinase 2##BC014243|TYK2|7297|tyrosine kinase 2##AF340060|ICAM3|3385|intercellular adhesion molecule 3##AF340061|ICAM3|3385|intercellular adhesion molecule 3##BC040123|ICAM3|3385|intercellular adhesion molecule 3##S50015|ICAM3|3385|intercellular adhesion molecule 3##AK309643|ICAM3|3385|intercellular adhesion molecule 3##BC058903|ICAM3|3385|intercellular adhesion molecule 3##X69819|ICAM3|3385|intercellular adhesion molecule 3##AX746321|ICAM3|3385|intercellular adhesion molecule 3##X69711|ICAM3|3385|intercellular adhesion molecule 3##BC034409|ICAM3|3385|intercellular adhesion molecule 3##BC046121|ICAM3|3385|intercellular adhesion molecule 3##AK312826|ICAM3|3385|intercellular adhesion molecule 3##AK226023|ICAM3|3385|intercellular adhesion molecule 3##NM_002162|ICAM3|3385|intercellular adhesion molecule 3##AM393285|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AM393349|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BT006796|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##CR542249|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ892174|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ895369|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U43077|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC000083|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC008793|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U63131|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##NM_007065|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)	0.0	
chr20	25200979	25201071	reg1029853.p1	4.452	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	-24545	+	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	-24655	+	BC126228 BC136497 AF251033 AF251034 DQ854807 DQ854808 DQ854809 DQ854810 DQ854811 DQ854812 NM_014588 NM_199425	-138264	-	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	27733	+	CU680756 AK075023 AK290815 AK293495 TSC_hg19_v1_chr20_-_25371426	170360	-	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	170501	-	AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC126228|VSX1|30813|visual system homeobox 1##BC136497|VSX1|30813|visual system homeobox 1##AF251033|VSX1|30813|visual system homeobox 1##AF251034|VSX1|30813|visual system homeobox 1##DQ854807|VSX1|30813|visual system homeobox 1##DQ854808|VSX1|30813|visual system homeobox 1##DQ854809|VSX1|30813|visual system homeobox 1##DQ854810|VSX1|30813|visual system homeobox 1##DQ854811|VSX1|30813|visual system homeobox 1##DQ854812|VSX1|30813|visual system homeobox 1##NM_014588|VSX1|30813|visual system homeobox 1##NM_199425|VSX1|30813|visual system homeobox 1##NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain##AK075023|ABHD12|26090|abhydrolase domain containing 12##AK290815|ABHD12|26090|abhydrolase domain containing 12##AK293495|ABHD12|26090|abhydrolase domain containing 12##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12	0.295655	CTCF.p2:2:0.296
chr20	30556327	30556446	reg1031771.p1	4.452	+	AY534245 NM_001011718 TSC_hg19_v1_chr20_+_30555960	-497	+	TSC_hg19_v1_chr20_-_30539856 NM_030815 AY286301	-16515	-	TSC_hg19_v1_chr20_-_30539818 BC009334 AK312021	-16560	-	NM_080625 AK057090 BC030254	41862	+	TSC_hg19_v1_chr20_+_30640055 NM_001172129 NM_001172130 NM_001172131 NM_001172132 NM_001172133 NM_002110 AK289896 AK225819 AK290928 AK298726 AK026432 BC108930 BC108931 BC113854 BC114463 AK314335 BC073748 BC094847 BC014435	83660	+	TSC_hg19_v1_chr20_+_30697308 NM_014742	140983	+	AY534245|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_001011718|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_030815|PDRG1|81572|p53 and DNA-damage regulated 1##AY286301|PDRG1|81572|p53 and DNA-damage regulated 1##BC009334|PDRG1|81572|p53 and DNA-damage regulated 1##AK312021|PDRG1|81572|p53 and DNA-damage regulated 1##NM_080625|C20orf160|140706|chromosome 20 open reading frame 160##AK057090|C20orf160|140706|chromosome 20 open reading frame 160##BC030254|C20orf160|140706|chromosome 20 open reading frame 160##NM_001172129|HCK|3055|hemopoietic cell kinase##NM_001172130|HCK|3055|hemopoietic cell kinase##NM_001172131|HCK|3055|hemopoietic cell kinase##NM_001172132|HCK|3055|hemopoietic cell kinase##NM_001172133|HCK|3055|hemopoietic cell kinase##NM_002110|HCK|3055|hemopoietic cell kinase##AK289896|HCK|3055|hemopoietic cell kinase##AK225819|HCK|3055|hemopoietic cell kinase##AK290928|HCK|3055|hemopoietic cell kinase##AK298726|HCK|3055|hemopoietic cell kinase##AK026432|HCK|3055|hemopoietic cell kinase##BC108930|HCK|3055|hemopoietic cell kinase##BC108931|HCK|3055|hemopoietic cell kinase##BC113854|HCK|3055|hemopoietic cell kinase##BC114463|HCK|3055|hemopoietic cell kinase##AK314335|HCK|3055|hemopoietic cell kinase##BC073748|HCK|3055|hemopoietic cell kinase##BC094847|HCK|3055|hemopoietic cell kinase##BC014435|HCK|3055|hemopoietic cell kinase##NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4	0.0	
chr2	148085266	148085446	reg1030769.p1	4.452	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-2807435	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-2807725	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-2810153	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	516761	+	TSC_hg19_v1_chr2_+_148602300 AK314124	516979	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	517289	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.0	
chr6	51396541	51396656	reg1028779.p1	4.452	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-610063	+	AY028376 NM_172238	-715342	+	DQ012016 NM_001037498	-1380235	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	555797	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	654608	+	AF384857 JF305974 AB590713 BC070124 NM_052872	712663	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.260363	CTCF.p2:-36:0.260
chr8	7305834	7305965	reg1033674.p1	4.452	+	AF301470 NM_001081551	-18030	-	AB590071 AF217245 AF516673 AB037972 AJ237673 NM_018661 AF295370	-18231	-	NM_001205266	-31546	-	NM_058206 NM_058207	3987	-	AJ628017 AF168617 AJ635328 AF168616 NM_016512 NM_058200 NM_058201 NM_058202 NM_058203	15210	-	AJ314834 BC100848 BC100849 BC100850 BC100851 NM_001040702 NM_080389	26704	-	AF301470|DEFB103B|55894|defensin, beta 103B##NM_001081551|DEFB103A|414325|defensin, beta 103A##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AF295370|DEFB103B|55894|defensin, beta 103B##NM_001205266|DEFB4B|100289462|defensin, beta 4B##NM_058206|SPAG11B|10407|sperm associated antigen 11B##NM_058207|SPAG11B|10407|sperm associated antigen 11B##AJ628017|SPAG11B|10407|sperm associated antigen 11B##AF168617|SPAG11B|10407|sperm associated antigen 11B##AJ635328|SPAG11B|10407|sperm associated antigen 11B##AF168616|SPAG11B|10407|sperm associated antigen 11B##NM_016512|SPAG11B|10407|sperm associated antigen 11B##NM_058200|SPAG11B|10407|sperm associated antigen 11B##NM_058201|SPAG11B|10407|sperm associated antigen 11B##NM_058202|SPAG11B|10407|sperm associated antigen 11B##NM_058203|SPAG11B|10407|sperm associated antigen 11B##AJ314834|DEFB104A|140596|defensin, beta 104A##BC100848|DEFB104A|140596|defensin, beta 104A##BC100849|DEFB104A|140596|defensin, beta 104A##BC100850|DEFB104A|140596|defensin, beta 104A##BC100851|DEFB104A|140596|defensin, beta 104A##NM_001040702|DEFB104B|503618|defensin, beta 104B##NM_080389|DEFB104A|140596|defensin, beta 104A	0.010777	
chr10	56700321	56700428	reg1027553.p2	4.451	+	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	-139376	-	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-2168948	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-2626259	+	NM_001190478 TSC_hg19_v1_chr10_+_57358800	658400	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	1420640	-	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	1420652	-	AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor	0.603578	CTCF.p2:-1:0.604
chr12	32259600	32259739	reg1026917.p1	4.451	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	-147275	+	TSC_hg19_v1_chr12_+_32112348 NM_018169	-147338	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	-314465	-	TSC_hg19_v1_chr12_+_32259750 BC010091	45	+	AK313430 AK290188 NM_001003398 NM_001714 U90028 BC136372 TSC_hg19_v1_chr12_+_32260263	504	+	BC039708 BC063403 NM_139241 BC096746 AK057294 BC045552	395370	+	AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)##U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	0.136686	
chr12	95224906	95225065	reg1029380.p2	4.451	+	EU831778 EU831856 BC040535 NM_020698	-180721	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-371253	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-371343	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	172485	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	172531	-	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	242313	-	EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	0.0	
chr17	58663745	58663902	reg1031473.p1	4.451	+	AK307666 TSC_hg19_v1_chr17_-_58603582 BC018121 AF017782 D86981 NM_006380	-60286	-	AB587349 TSC_hg19_v1_chr17_-_58603343 AK292227	-60494	-	TSC_hg19_v1_chr17_+_58499858 NM_181707 BC036356 BC048806	-163944	+	TSC_hg19_v1_chr17_+_58677553 BC060877 NM_003620 AK312902 AK299773 U78305	13721	+	TSC_hg19_v1_chr17_+_58677710 BC016480 BC042418 BC032826 BC033893 DQ891047 EU176552 BT009780	13866	+	TSC_hg19_v1_chr17_+_58755255 NM_001099432 NM_017679 AK304791 AK225757 BC017390 AK314744 AF361219 BC117275 BC143386 BC143387 AK025510	91390	+	AK307666|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##BC018121|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##AF017782|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##D86981|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##NM_006380|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##AK292227|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##NM_181707|C17orf64|124773|chromosome 17 open reading frame 64##BC036356|C17orf64|124773|chromosome 17 open reading frame 64##BC048806|C17orf64|124773|chromosome 17 open reading frame 64##BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_001099432|BCAS3|54828|breast carcinoma amplified sequence 3##NM_017679|BCAS3|54828|breast carcinoma amplified sequence 3##AK304791|BCAS3|54828|breast carcinoma amplified sequence 3##AK225757|BCAS3|54828|breast carcinoma amplified sequence 3##BC017390|BCAS3|54828|breast carcinoma amplified sequence 3##AK314744|BCAS3|54828|breast carcinoma amplified sequence 3##AF361219|BCAS3|54828|breast carcinoma amplified sequence 3##BC117275|BCAS3|54828|breast carcinoma amplified sequence 3##BC143386|BCAS3|54828|breast carcinoma amplified sequence 3##BC143387|BCAS3|54828|breast carcinoma amplified sequence 3##AK025510|BCAS3|54828|breast carcinoma amplified sequence 3	0.961453	CTCF.p2:13:0.961
chr19	50828903	50829073	reg1028381.p1	4.451	+	BC007877 TSC_hg19_v1_chr19_+_50796867	-32144	+	BC018933 TSC_hg19_v1_chr19_+_50713879	-115137	+	TSC_hg19_v1_chr19_+_50706878 AY165122 BC129803 NM_001077186 NM_001145809 NM_024729 AK307783 AB290169	-122097	+	AF055989 NM_004977	3645	-	BC085008 BC006149 BC111705 BC040958 BC053864 BC065203 BC032360 AF090387 AF098485 AF200344 AK300884 BC019048 AK310134 TSC_hg19_v1_chr19_-_50848025	19004	-	AF090386 DQ891993 DQ895183 CU676086 AF200345 BC029397 AK308013 AK314364 BC017842 AF098484 NM_004851	39915	-	BC007877|MYH14|79784|myosin, heavy chain 14, non-muscle##BC018933|MYH14|79784|myosin, heavy chain 14, non-muscle##AY165122|MYH14|79784|myosin, heavy chain 14, non-muscle##BC129803|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_001077186|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_001145809|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_024729|MYH14|79784|myosin, heavy chain 14, non-muscle##AK307783|MYH14|79784|myosin, heavy chain 14, non-muscle##AB290169|MYH14|79784|myosin, heavy chain 14, non-muscle##AF055989|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##NM_004977|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##BC085008|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC006149|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC111705|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC040958|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC053864|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC065203|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC032360|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF090387|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF098485|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF200344|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK300884|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC019048|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK310134|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF090386|NAPSA|9476|napsin A aspartic peptidase##DQ891993|NAPSA|9476|napsin A aspartic peptidase##DQ895183|NAPSA|9476|napsin A aspartic peptidase##AF200345|NAPSA|9476|napsin A aspartic peptidase##BC029397|NAPSA|9476|napsin A aspartic peptidase##AK308013|NAPSA|9476|napsin A aspartic peptidase##AK314364|NAPSA|9476|napsin A aspartic peptidase##BC017842|NAPSA|9476|napsin A aspartic peptidase##AF098484|NAPSA|9476|napsin A aspartic peptidase##NM_004851|NAPSA|9476|napsin A aspartic peptidase	0.0	
chr22	34238111	34238246	reg1026831.p2	4.451	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-783823	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-835452	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-1040426	+	AJ007583 AB011181 NM_004737 NM_133642	78192	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1223971	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1415298	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr3	58293498	58293608	reg1029641.p1	4.451	+	AK311396 TSC_hg19_v1_chr3_+_58292265 AK311969	-1292	+	TSC_hg19_v1_chr3_+_58292022 BC012017 BC002441 BC007342	-1536	+	TSC_hg19_v1_chr3_+_58292000 AF001175	-1553	+	TSC_hg19_v1_chr3_+_58318618 AY274811 NM_017771 AK000342 AK295542	25060	+	TSC_hg19_v1_chr3_+_58318663 BC008943 AB209688 AK131385 AY437879 AK296215 BC014479 AY847220 AY847221 AY847222 AF399753 CU677017 DQ124707 DQ124708	25121	+	M34056 M19123 BC004115 AB528205 AM392999 AM393278 CR541911 CU674222 DQ891366 DQ894546 M34479 M34055 M54788 AB209241 AL117618 AK293153 BC000439 BC001924 TSC_hg19_v1_chr3_-_58419557 AK225569 AK311514 AK313022 J03576 X57778 AK225621 NM_000925 NM_001173468	125929	-	AK311396|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AK311969|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC012017|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC002441|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC007342|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AF001175|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AY274811|PXK|54899|PX domain containing serine/threonine kinase##NM_017771|PXK|54899|PX domain containing serine/threonine kinase##AK000342|PXK|54899|PX domain containing serine/threonine kinase##AK295542|PXK|54899|PX domain containing serine/threonine kinase##BC008943|PXK|54899|PX domain containing serine/threonine kinase##AB209688|PXK|54899|PX domain containing serine/threonine kinase##AK131385|PXK|54899|PX domain containing serine/threonine kinase##AY437879|PXK|54899|PX domain containing serine/threonine kinase##AK296215|PXK|54899|PX domain containing serine/threonine kinase##BC014479|PXK|54899|PX domain containing serine/threonine kinase##AY847220|PXK|54899|PX domain containing serine/threonine kinase##AY847221|PXK|54899|PX domain containing serine/threonine kinase##AY847222|PXK|54899|PX domain containing serine/threonine kinase##AF399753|PXK|54899|PX domain containing serine/threonine kinase##DQ124707|PXK|54899|PX domain containing serine/threonine kinase##DQ124708|PXK|54899|PX domain containing serine/threonine kinase##M34056|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M19123|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC004115|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM392999|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM393278|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##CR541911|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ891366|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ894546|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34479|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34055|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M54788|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AB209241|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AL117618|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK293153|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC000439|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC001924|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225569|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK311514|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK313022|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##J03576|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##X57778|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225621|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_000925|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_001173468|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta	0.995564	CTCF.p2:13:0.996
chr8	89341021	89341170	reg1024569.p1	4.451	+	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	-1349	-	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	-454836	-	AK093121 AX747937 BC117326 BC117328 NM_173538	-1462422	+	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	1428935	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	1429189	+	AF061326 NM_004337	1573000	+	AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF061326|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_004337|OSGIN2|734|oxidative stress induced growth inhibitor family member 2	0.394847	CTCF.p2:68:0.395
chr10	76555690	76555862	reg1030981.p1	4.450	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-619189	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-619246	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-619294	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	30578	+	AY686755 NM_001003892 BC137321 BC137322	262529	-	AB027004 AB103375 NM_016364	303471	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr11	59898110	59898230	reg1030431.p1	4.450	+	AK304487 AK310142 NM_000139 D10583 BC074800 BC074843 AB590499 JF411082	-41983	+	TSC_hg19_v1_chr11_+_59824137 L35848 BC008487	-74021	+	TSC_hg19_v1_chr11_+_59824100 NM_001031666 NM_001031809 NM_006138	-74084	+	AK301387 TSC_hg19_v1_chr11_-_59950526 AB013104 AF350502 AF350503 AF142409 BC022854 BC108728 AK026454 AF212240 AF237908 AF253977 AF261136 AF354930 AK300725 NM_022349 NM_152851	52480	-	AK291870 NM_001247999 NM_152852	53968	-	NM_001243266 NM_024021 NM_148975 AK292089 AK075081 TSC_hg19_v1_chr11_+_60048138 BC020648 CU676600 DQ891395 DQ894573 AB022821 AK314033 AB013102	149923	+	AK304487|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##AK310142|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##NM_000139|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##D10583|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##BC074800|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##BC074843|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##JF411082|MS4A2|2206|membrane-spanning 4-domains, subfamily A, member 2 (Fc fragment of IgE, high affinity I, receptor for; beta polypeptide)##L35848|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##BC008487|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##NM_001031666|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##NM_001031809|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##NM_006138|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##AK301387|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AB013104|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF350502|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF350503|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF142409|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC022854|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##BC108728|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK026454|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF212240|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF237908|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF253977|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF261136|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AF354930|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK300725|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_022349|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152851|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK291870|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001247999|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001243266|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_024021|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_148975|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK292089|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK075081|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC020648|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ891395|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ894573|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB022821|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK314033|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB013102|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4	0.998937	CTCF.p2:13:0.999
chr11	65184195	65184375	reg1000600.p2	4.450	+	TSC_hg19_v1_chr11_+_65154127 AK074850 BC033851 AK056778 BC044658 AK291678 AK304363 BC051695	-30174	+	NM_031904 TSC_hg19_v1_chr11_+_65154083 BC021094	-30221	+	BC036869 BX648573 NM_001077241 NM_182556	-34161	-	TSC_hg19_v1_chr11_+_65190268 EF177379 GQ859162	5984	+	TSC_hg19_v1_chr11_+_65190274 AK026198	5993	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	8115	+	AK074850|FRMD8|83786|FERM domain containing 8##BC033851|FRMD8|83786|FERM domain containing 8##AK056778|FRMD8|83786|FERM domain containing 8##BC044658|FRMD8|83786|FERM domain containing 8##AK291678|FRMD8|83786|FERM domain containing 8##AK304363|FRMD8|83786|FERM domain containing 8##BC051695|FRMD8|83786|FERM domain containing 8##NM_031904|FRMD8|83786|FERM domain containing 8##BC036869|SLC25A45|283130|solute carrier family 25, member 45##BX648573|SLC25A45|283130|solute carrier family 25, member 45##NM_001077241|SLC25A45|283130|solute carrier family 25, member 45##NM_182556|SLC25A45|283130|solute carrier family 25, member 45##EF177379|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)	0.0	
chr11	9780397	9780503	reg1008352.p4	4.450	+	AK098060 TSC_hg19_v1_chr11_+_9779882	-588	+	TSC_hg19_v1_chr11_+_9685669 AB014540 BC000134 CU674300 AF210818 AK304104	-94744	+	BC000616 TSC_hg19_v1_chr11_+_9685651 AF134894	-94799	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	535316	-	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	546179	+	AK295046 NM_001172431	691417	+	AK098060|LOC283104|283104|uncharacterized LOC283104##AB014540|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000134|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF210818|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AK304104|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000616|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF134894|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3	0.0	
chr12	6580017	6580083	reg1026999.p2	4.450	+	TSC_hg19_v1_chr12_-_6579844 AF060538 BC023286 AK289498 AK296294 AK303137 AK309184 NM_014231 NM_016830 NM_199245	-236	-	NM_018009 TSC_hg19_v1_chr12_+_6561272 BC015017 AK223163 AK001005 AK002056 AK222956 AK098035 HQ258015	-18756	+	AK315732 NM_001242 BC012160 M63928 DQ892296 EU176659 AB590221 CU680244	-25904	+	BC000191 TSC_hg19_v1_chr12_-_6602417 BC014329 AB049959 AF151075 AF212248 NM_016497	22394	-	TSC_hg19_v1_chr12_+_6602542 D63880 BC016913	22499	+	AK125155 AK303310 TSC_hg19_v1_chr12_+_6603270 AK128354	23216	+	AF060538|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC023286|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK289498|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK296294|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK303137|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK309184|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_014231|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_016830|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_199245|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_018009|TAPBPL|55080|TAP binding protein-like##BC015017|TAPBPL|55080|TAP binding protein-like##AK223163|TAPBPL|55080|TAP binding protein-like##AK001005|TAPBPL|55080|TAP binding protein-like##AK002056|TAPBPL|55080|TAP binding protein-like##AK222956|TAPBPL|55080|TAP binding protein-like##AK098035|TAPBPL|55080|TAP binding protein-like##HQ258015|TAPBPL|55080|TAP binding protein-like##AK315732|CD27|939|CD27 molecule##NM_001242|CD27|939|CD27 molecule##BC012160|CD27|939|CD27 molecule##M63928|CD27|939|CD27 molecule##DQ892296|CD27|939|CD27 molecule##EU176659|CD27|939|CD27 molecule##BC000191|MRPL51|51258|mitochondrial ribosomal protein L51##BC014329|MRPL51|51258|mitochondrial ribosomal protein L51##AB049959|MRPL51|51258|mitochondrial ribosomal protein L51##AF151075|MRPL51|51258|mitochondrial ribosomal protein L51##AF212248|MRPL51|51258|mitochondrial ribosomal protein L51##NM_016497|MRPL51|51258|mitochondrial ribosomal protein L51##D63880|NCAPD2|9918|non-SMC condensin I complex, subunit D2##BC016913|NCAPD2|9918|non-SMC condensin I complex, subunit D2##AK125155|NCAPD2|9918|non-SMC condensin I complex, subunit D2##AK303310|NCAPD2|9918|non-SMC condensin I complex, subunit D2##AK128354|NCAPD2|9918|non-SMC condensin I complex, subunit D2	0.0	
chr14	75980977	75981158	reg1036106.p1	4.450	+	BC051303 NM_001135049	-82231	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	-86054	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	-86426	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	7723	+	TSC_hg19_v1_chr14_+_75988840 D42106	7785	+	NM_017791 AY260572 AY260577 BC019087 AK000378	63898	+	BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	0.0	
chr2	136874500	136874624	reg1032451.p2	4.450	+	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-764	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-131346	-	TSC_hg19_v1_chr2_-_136743143 AK222476 BC000629 AK290607 J05032	-131433	-	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	1114	-	TSC_hg19_v1_chr2_+_137523114 AK299929	648554	+	NM_001080427	873899	+	NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK222476|DARS|1615|aspartyl-tRNA synthetase##BC000629|DARS|1615|aspartyl-tRNA synthetase##AK290607|DARS|1615|aspartyl-tRNA synthetase##J05032|DARS|1615|aspartyl-tRNA synthetase##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B	0.0	
chr21	43813274	43813454	reg1025222.p1	4.450	+	M12075 BC032811 NM_003225 X00474 X52003	-26742	-	X51698 BC032820 NM_005423	-42226	-	NM_003226 AF432265	-77632	-	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	2797	-	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	10648	+	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	103016	-	M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2##NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)	0.0	
chr2	1890317	1890419	reg1030975.p2	4.450	+	TSC_hg19_v1_chr2_-_1748320 BC030834	-142046	-	TSC_hg19_v1_chr2_-_1748288 NM_012293	-142075	-	TSC_hg19_v1_chr2_-_1748282 AF200348 D86983 EF090903	-142107	-	AL133024 TSC_hg19_v1_chr2_-_1926602	36183	-	BC031690 TSC_hg19_v1_chr2_-_1946938	56538	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	444597	-	BC030834|PXDN|7837|peroxidasin homolog (Drosophila)##NM_012293|PXDN|7837|peroxidasin homolog (Drosophila)##AF200348|PXDN|7837|peroxidasin homolog (Drosophila)##D86983|PXDN|7837|peroxidasin homolog (Drosophila)##EF090903|PXDN|7837|peroxidasin homolog (Drosophila)##AL133024|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like	0.997493	CTCF.p2:-5:0.997
chr2	224626031	224626137	reg1032629.p1	4.450	+	TSC_hg19_v1_chr2_-_224467145 NM_003469	-158905	-	TSC_hg19_v1_chr2_-_224467100 BC022509	-158977	-	M25756 TSC_hg19_v1_chr2_-_224467083 AK298828 AK312452	-159018	-	AF393369 BC021898 TSC_hg19_v1_chr2_-_224702284 AK025338 AK299026	76165	-	TSC_hg19_v1_chr2_-_224702300 BC009606 NM_001039569	76226	-	TSC_hg19_v1_chr2_-_224810010 AF411977 AB527455 CU691898	183909	-	NM_003469|SCG2|7857|secretogranin II##BC022509|SCG2|7857|secretogranin II##M25756|SCG2|7857|secretogranin II##AK298828|SCG2|7857|secretogranin II##AK312452|SCG2|7857|secretogranin II##AF393369|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##BC021898|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK025338|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK299026|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##BC009606|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##NM_001039569|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AF411977|WDFY1|57590|WD repeat and FYVE domain containing 1	0.0	
chr2	9278824	9278937	reg1024387.p2	4.450	+	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	-135059	-	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	-301161	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-456677	+	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	68012	+	TSC_hg19_v1_chr2_+_9346940 BC063308	68079	+	TSC_hg19_v1_chr2_-_9563308 AK093179	284462	-	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##BC063308|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AK093179|ITGB1BP1|9270|integrin beta 1 binding protein 1	0.037459	
chr6	90122419	90122547	reg1031232.p2	4.450	+	TSC_hg19_v1_chr6_-_90121986 NM_021244	-359	-	TSC_hg19_v1_chr6_-_90121945 AK289799	-555	-	BC003088 AF272036 AL137502 TSC_hg19_v1_chr6_-_90121800	-743	-	TSC_hg19_v1_chr6_+_90142897 NM_001242809 NM_001242813 NM_014942 AK307792 BC042173 AB023174	20452	+	NM_001242811 AK295731	149594	+	NM_001242814 AK096867	154142	+	NM_021244|RRAGD|58528|Ras-related GTP binding D##AK289799|RRAGD|58528|Ras-related GTP binding D##BC003088|RRAGD|58528|Ras-related GTP binding D##AF272036|RRAGD|58528|Ras-related GTP binding D##AL137502|RRAGD|58528|Ras-related GTP binding D##NM_001242809|ANKRD6|22881|ankyrin repeat domain 6##NM_001242813|ANKRD6|22881|ankyrin repeat domain 6##NM_014942|ANKRD6|22881|ankyrin repeat domain 6##AK307792|ANKRD6|22881|ankyrin repeat domain 6##BC042173|ANKRD6|22881|ankyrin repeat domain 6##AB023174|ANKRD6|22881|ankyrin repeat domain 6##NM_001242811|ANKRD6|22881|ankyrin repeat domain 6##AK295731|ANKRD6|22881|ankyrin repeat domain 6##NM_001242814|ANKRD6|22881|ankyrin repeat domain 6##AK096867|ANKRD6|22881|ankyrin repeat domain 6	0.0	
chr8	125550748	125550840	reg1028974.p1	4.450	+	TSC_hg19_v1_chr8_+_125487193 AK001602 AB464690 CU692372	-63523	+	AF064801 TSC_hg19_v1_chr8_+_125487120 BC021571 BC064636	-63656	+	TSC_hg19_v1_chr8_+_125486954 NM_007218	-63816	+	TSC_hg19_v1_chr8_-_125551327 AF212250 BC064964 AY071865 AK312204 BC007066 NM_001146160 NM_032026	513	-	NM_005005 AF261090 TSC_hg19_v1_chr8_+_125551363 AF044956 AF067168 AK026538 AL136714 BC007672 AK302286 AK313432 AB463917	590	+	TSC_hg19_v1_chr8_-_125579395 AK126989	28612	-	AK001602|RNF139|11236|ring finger protein 139##AF064801|RNF139|11236|ring finger protein 139##BC021571|RNF139|11236|ring finger protein 139##BC064636|RNF139|11236|ring finger protein 139##NM_007218|RNF139|11236|ring finger protein 139##AF212250|TATDN1|83940|TatD DNase domain containing 1##BC064964|TATDN1|83940|TatD DNase domain containing 1##AY071865|TATDN1|83940|TatD DNase domain containing 1##AK312204|TATDN1|83940|TatD DNase domain containing 1##BC007066|TATDN1|83940|TatD DNase domain containing 1##NM_001146160|TATDN1|83940|TatD DNase domain containing 1##NM_032026|TATDN1|83940|TatD DNase domain containing 1##NM_005005|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF261090|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF044956|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF067168|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AK026538|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AL136714|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##BC007672|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AK313432|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AK126989|MTSS1|9788|metastasis suppressor 1	0.94456	CTCF.p2:-27:0.945
chr10	32059214	32059341	reg1001727.p1	4.449	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-449188	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-451144	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-451320	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	158447	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	158508	-	TSC_hg19_v1_chr10_-_32344938 AB462413	285655	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.0	
chr10	68387104	68387184	reg1034039.p1	4.449	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-3105903	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-3105982	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-3106029	+	NM_178011 BX640611 AY358315 BC111492	298671	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	1038252	-	AF091606 AK313882 NM_013266	1068793	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.307835	CTCF.p2:0:0.308
chr12	14393105	14393286	reg1020783.p3	4.449	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-260209	-	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-1043466	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-1043478	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	125440	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	145077	+	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	327414	-	BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1	0.0	
chr15	63796406	63796583	reg1023856.p3	4.449	+	AK315769 NM_001218 NM_206925 TSC_hg19_v1_chr15_-_63674076	-122419	-	BT006656 DQ893188 DQ896511 EU831616 EU831623 EU831703 EU831708 AF051882 BC000278 AF037335 BC011691 TSC_hg19_v1_chr15_-_63674046 AK096845 BC023981	-122502	-	NM_001145646 NM_031301 TSC_hg19_v1_chr15_+_63569803 AK291204 AL136671 BC020905 AB189172 AB197122 AF508794 AX776001 AY358698 AB528062 AM392724 AM392878 DQ891401 CU676772 AK307725	-226681	+	TSC_hg19_v1_chr15_+_63796791 AK314223	288	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	383	+	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	93085	+	AK315769|CA12|771|carbonic anhydrase XII##NM_001218|CA12|771|carbonic anhydrase XII##NM_206925|CA12|771|carbonic anhydrase XII##BT006656|CA12|771|carbonic anhydrase XII##DQ893188|CA12|771|carbonic anhydrase XII##DQ896511|CA12|771|carbonic anhydrase XII##EU831616|CA12|771|carbonic anhydrase XII##EU831623|CA12|771|carbonic anhydrase XII##EU831703|CA12|771|carbonic anhydrase XII##EU831708|CA12|771|carbonic anhydrase XII##AF051882|CA12|771|carbonic anhydrase XII##BC000278|CA12|771|carbonic anhydrase XII##AF037335|CA12|771|carbonic anhydrase XII##BC011691|CA12|771|carbonic anhydrase XII##AK096845|CA12|771|carbonic anhydrase XII##BC023981|CA12|771|carbonic anhydrase XII##NM_001145646|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##NM_031301|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK291204|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AL136671|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##BC020905|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB189172|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB197122|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AF508794|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AY358698|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392724|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392878|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##DQ891401|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK307725|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK314223|USP3|9960|ubiquitin specific peptidase 3##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22	0.499678	CTCF.p2:99:0.441
chr1	8919593	8919724	reg1029288.p1	4.449	+	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	-42066	-	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	-435641	-	NM_001080397	-535269	+	GU170215 NM_001201483	11976	-	BC001810 TSC_hg19_v1_chr1_-_8938710 AK098420 M14328 BC011130	19049	-	BC015641 BC027725 TSC_hg19_v1_chr1_-_8938743 BC004458 BC009912 AK222517 BC022545 D28437	19077	-	BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##GU170215|ENO1|2023|enolase 1, (alpha)##NM_001201483|ENO1|2023|enolase 1, (alpha)##BC001810|ENO1|2023|enolase 1, (alpha)##AK098420|ENO1|2023|enolase 1, (alpha)##M14328|ENO1|2023|enolase 1, (alpha)##BC011130|ENO1|2023|enolase 1, (alpha)##BC015641|ENO1|2023|enolase 1, (alpha)##BC027725|ENO1|2023|enolase 1, (alpha)##BC004458|ENO1|2023|enolase 1, (alpha)##BC009912|ENO1|2023|enolase 1, (alpha)##AK222517|ENO1|2023|enolase 1, (alpha)##BC022545|ENO1|2023|enolase 1, (alpha)##D28437|ENO1|2023|enolase 1, (alpha)	0.93777	CTCF.p2:-5:0.938
chr19	17858178	17858323	reg1033648.p1	4.449	+	DQ387861 NM_018174 AL834233 BC067115 TSC_hg19_v1_chr19_+_17830310 BC080547 AJ440784 AK027623 BC113952 AK308975	-27941	+	TSC_hg19_v1_chr19_+_17830288 AK292555	-27960	+	AB028955 NM_001080421 AB587313 TSC_hg19_v1_chr19_-_17799158	-59152	-	TSC_hg19_v1_chr19_+_17858564 NM_001161357 NM_001161358 AK291410 BC028021	301	+	NM_001161359 NM_015122 TSC_hg19_v1_chr19_+_17862326 AK316458 BC041130	4066	+	TSC_hg19_v1_chr19_+_17905918 NM_014256	47666	+	DQ387861|MAP1S|55201|microtubule-associated protein 1S##NM_018174|MAP1S|55201|microtubule-associated protein 1S##AL834233|MAP1S|55201|microtubule-associated protein 1S##BC067115|MAP1S|55201|microtubule-associated protein 1S##BC080547|MAP1S|55201|microtubule-associated protein 1S##AJ440784|MAP1S|55201|microtubule-associated protein 1S##AK027623|MAP1S|55201|microtubule-associated protein 1S##BC113952|MAP1S|55201|microtubule-associated protein 1S##AK308975|MAP1S|55201|microtubule-associated protein 1S##AK292555|MAP1S|55201|microtubule-associated protein 1S##AB028955|UNC13A|23025|unc-13 homolog A (C. elegans)##NM_001080421|UNC13A|23025|unc-13 homolog A (C. elegans)##NM_001161357|FCHO1|23149|FCH domain only 1##NM_001161358|FCHO1|23149|FCH domain only 1##AK291410|FCHO1|23149|FCH domain only 1##BC028021|FCHO1|23149|FCH domain only 1##NM_001161359|FCHO1|23149|FCH domain only 1##NM_015122|FCHO1|23149|FCH domain only 1##AK316458|FCHO1|23149|FCH domain only 1##BC041130|FCHO1|23149|FCH domain only 1##NM_014256|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3	0.0	
chr12	131724347	131724527	reg1031072.p2	4.448	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-285984	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-367726	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-367812	+	TSC_hg19_v1_chr12_+_132195623 BC142980	471176	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	471219	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	588529	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.0	
chr12	1388377	1388542	reg1033611.p2	4.448	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-288007	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-329633	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-371377	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	314892	-	AY009399 NM_030775	337762	+	BC001749 NM_032642	349952	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.378383	CTCF.p2:-58:0.378
chr19	39758867	39759010	reg1034535.p1	4.448	+	AY184374 HQ258095 AY336714 AY336717 NM_172139 BC130314 BC130316 AY129149	-23277	-	BC039541 AK130951 TSC_hg19_v1_chr19_-_39694904 BC121075 BC121076 NM_001080468	-64040	-	BC092493 AK123941 BC067874 NM_001001414 TSC_hg19_v1_chr19_+_39687603	-71336	+	BC113581 BC113583 AY129148 DQ126337 NM_172138	216	+	AY129150 NM_172140 BC117482 BC126183 BC074985 AY336716 HQ258085 AY184372 HQ214053	28074	+	NM_020862	47037	-	AY184374|IL28B|282617|interleukin 28B (interferon, lambda 3)##HQ258095|IL28B|282617|interleukin 28B (interferon, lambda 3)##AY336714|IL28B|282617|interleukin 28B (interferon, lambda 3)##AY336717|IL28B|282617|interleukin 28B (interferon, lambda 3)##NM_172139|IL28B|282617|interleukin 28B (interferon, lambda 3)##BC130314|IL28B|282617|interleukin 28B (interferon, lambda 3)##BC130316|IL28B|282617|interleukin 28B (interferon, lambda 3)##AY129149|IL28B|282617|interleukin 28B (interferon, lambda 3)##BC039541|SYCN|342898|syncollin##AK130951|SYCN|342898|syncollin##BC121075|SYCN|342898|syncollin##BC121076|SYCN|342898|syncollin##NM_001080468|SYCN|342898|syncollin##BC092493|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##AK123941|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##BC067874|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##NM_001001414|NCCRP1|342897|non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)##BC113581|IL28A|282616|interleukin 28A (interferon, lambda 2)##BC113583|IL28A|282616|interleukin 28A (interferon, lambda 2)##AY129148|IL28A|282616|interleukin 28A (interferon, lambda 2)##DQ126337|IL28A|282616|interleukin 28A (interferon, lambda 2)##NM_172138|IL28A|282616|interleukin 28A (interferon, lambda 2)##AY129150|IL29|282618|interleukin 29 (interferon, lambda 1)##NM_172140|IL29|282618|interleukin 29 (interferon, lambda 1)##BC117482|IL29|282618|interleukin 29 (interferon, lambda 1)##BC126183|IL29|282618|interleukin 29 (interferon, lambda 1)##BC074985|IL29|282618|interleukin 29 (interferon, lambda 1)##AY336716|IL29|282618|interleukin 29 (interferon, lambda 1)##HQ258085|IL29|282618|interleukin 29 (interferon, lambda 1)##AY184372|IL29|282618|interleukin 29 (interferon, lambda 1)##HQ214053|IL29|282618|interleukin 29 (interferon, lambda 1)##NM_020862|LRFN1|57622|leucine rich repeat and fibronectin type III domain containing 1	0.0	
chr19	42636728	42636908	reg1004511.p1	4.448	+	M36718 X13809 BT007438 AB590941 TSC_hg19_v1_chr19_-_42636564 BC006101 M36653 NM_001207025 NM_001207026 NM_001247994 NM_002698 X53468	-227	-	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	-56452	+	TSC_hg19_v1_chr19_+_42580286 NM_022752	-56536	+	TSC_hg19_v1_chr19_-_42721830 BC027930 NM_133328 AY125488 BC013372 AK307895 AK130203 AK075328	85021	-	TSC_hg19_v1_chr19_+_42724463 AK298895 AB075831 NM_133444	87646	+	AK122649 TSC_hg19_v1_chr19_+_42724498 BC013013	87683	+	M36718|POU2F2|5452|POU class 2 homeobox 2##X13809|POU2F2|5452|POU class 2 homeobox 2##BT007438|POU2F2|5452|POU class 2 homeobox 2##BC006101|POU2F2|5452|POU class 2 homeobox 2##M36653|POU2F2|5452|POU class 2 homeobox 2##NM_001207025|POU2F2|5452|POU class 2 homeobox 2##NM_001207026|POU2F2|5452|POU class 2 homeobox 2##NM_001247994|POU2F2|5452|POU class 2 homeobox 2##NM_002698|POU2F2|5452|POU class 2 homeobox 2##X53468|POU2F2|5452|POU class 2 homeobox 2##AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574##NM_022752|ZNF574|64763|zinc finger protein 574##BC027930|DEDD2|162989|death effector domain containing 2##NM_133328|DEDD2|162989|death effector domain containing 2##AY125488|DEDD2|162989|death effector domain containing 2##BC013372|DEDD2|162989|death effector domain containing 2##AK307895|DEDD2|162989|death effector domain containing 2##AK130203|DEDD2|162989|death effector domain containing 2##AK075328|DEDD2|162989|death effector domain containing 2##AK298895|ZNF526|116115|zinc finger protein 526##AB075831|ZNF526|116115|zinc finger protein 526##NM_133444|ZNF526|116115|zinc finger protein 526##AK122649|ZNF526|116115|zinc finger protein 526##BC013013|ZNF526|116115|zinc finger protein 526	0.0	
chr2	134877255	134877436	reg1031107.p1	4.448	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-551307	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-697991	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-1337651	-	NM_002410 D17716 AF113921	134540	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	599211	-	AK125008 NM_138326 BC016018 BC107420 AB071418	718873	+	AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	0.0	
chr2	62541132	62541234	reg1029756.p1	4.448	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-117917	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-408354	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-425397	-	BC047439 AK091902 AX747245 NM_198276	192356	-	AK292545 NM_001142615	359802	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	391783	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr3	523519	523608	reg1028350.p1	4.448	+	NM_001253388 BC104918 BC143496 BC143498 AB384920	-162151	+	TSC_hg19_v1_chr3_+_239671 AK055236	-283892	+	TSC_hg19_v1_chr3_+_238541 AF002246	-284971	+	AK126307 TSC_hg19_v1_chr3_+_577916	54352	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	611100	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	1616998	+	NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK055236|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AF002246|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4	0.996377	CTCF.p2:-5:0.996
chr3	81810840	81811021	reg1026909.p3	4.448	+	TSC_hg19_v1_chr3_-_81810866 AB209731 BC012098	-82	-	TSC_hg19_v1_chr3_-_81810802 AK297939	-125	-	TSC_hg19_v1_chr3_-_81810798 AK312245	-132	-	TSC_hg19_v1_chr3_-_81810971 NM_000158	12	-	BC031255 TSC_hg19_v1_chr3_+_82035308	224372	+	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	3197199	+	AB209731|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##BC012098|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##NM_000158|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2	0.782817	CTCF.p2:32:0.783
chr7	102312049	102312173	reg1031905.p1	4.448	+	AK302217 NM_001031618 NM_001166339	-21340	+	EU341824 NM_001114403 AK296589	-28835	-	TSC_hg19_v1_chr7_-_102257205 AK026441 AK310176 NM_001079877 NM_006989 AY029206	-54887	-	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	9	-	TSC_hg19_v1_chr7_+_102389473 NM_001145268 NM_001145269 BC029175 AK297455 AK298753 AK054745 DQ893359 DQ896678	77379	+	NM_001031692 NM_005824 TSC_hg19_v1_chr7_+_102553446 AK226021 AK225701 U32907 AK290305 BC027903 AY358889	241321	+	AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##EU341824|UPK3BL|100134938|uroplakin 3B-like##NM_001114403|UPK3BL|100134938|uroplakin 3B-like##AK026441|RASA4|10156|RAS p21 protein activator 4##AK310176|RASA4|10156|RAS p21 protein activator 4##NM_001079877|RASA4|10156|RAS p21 protein activator 4##NM_006989|RASA4|10156|RAS p21 protein activator 4##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_001145268|FAM185A|222234|family with sequence similarity 185, member A##NM_001145269|FAM185A|222234|family with sequence similarity 185, member A##BC029175|FAM185A|222234|family with sequence similarity 185, member A##AK297455|FAM185A|222234|family with sequence similarity 185, member A##AK298753|FAM185A|222234|family with sequence similarity 185, member A##AK054745|FAM185A|222234|family with sequence similarity 185, member A##DQ893359|FAM185A|222234|family with sequence similarity 185, member A##DQ896678|FAM185A|222234|family with sequence similarity 185, member A##NM_001031692|LRRC17|10234|leucine rich repeat containing 17##NM_005824|LRRC17|10234|leucine rich repeat containing 17##AK226021|LRRC17|10234|leucine rich repeat containing 17##AK225701|LRRC17|10234|leucine rich repeat containing 17##U32907|LRRC17|10234|leucine rich repeat containing 17##AK290305|LRRC17|10234|leucine rich repeat containing 17##BC027903|LRRC17|10234|leucine rich repeat containing 17##AY358889|LRRC17|10234|leucine rich repeat containing 17	0.011658	
chr9	127557333	127557439	reg1030592.p1	4.448	+	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	-17886	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	-23876	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	-136682	+	BC150645 BC171828 BC171830 BC171837 BC127949 TSC_hg19_v1_chr9_+_127615749 NM_001045476	58338	+	TSC_hg19_v1_chr9_-_127624226 BC071915 U12465 BC000348 AK291072 BC010919 D28448 NM_007209	66831	-	TSC_hg19_v1_chr9_+_127624397 AK056174	67008	+	AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A##HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##BC150645|WDR38|401551|WD repeat domain 38##BC171828|WDR38|401551|WD repeat domain 38##BC171830|WDR38|401551|WD repeat domain 38##BC171837|WDR38|401551|WD repeat domain 38##BC127949|WDR38|401551|WD repeat domain 38##NM_001045476|WDR38|401551|WD repeat domain 38##BC071915|RPL35|11224|ribosomal protein L35##U12465|RPL35|11224|ribosomal protein L35##BC000348|RPL35|11224|ribosomal protein L35##AK291072|RPL35|11224|ribosomal protein L35##BC010919|RPL35|11224|ribosomal protein L35##D28448|RPL35|11224|ribosomal protein L35##NM_007209|RPL35|11224|ribosomal protein L35##AK056174|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like	0.343837	CTCF.p2:45:0.239
chr2	3426284	3426417	reg1029594.p2	4.447	+	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	-42845	+	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	-44794	-	TSC_hg19_v1_chr2_-_2335085 AK307797	-1091266	-	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	96948	-	TSC_hg19_v1_chr2_-_3523345 NM_018269	97001	-	AJ224117 BT019670 CR541820 DQ892597 DQ895824 TSC_hg19_v1_chr2_-_3605880 AF048994 AK096913 AF048995 AK075490	179529	-	AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK307797|MYT1L|23040|myelin transcription factor 1-like##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1##NM_018269|ADI1|55256|acireductone dioxygenase 1##AJ224117|RNASEH1|246243|ribonuclease H1##BT019670|RNASEH1|246243|ribonuclease H1##CR541820|RNASEH1|246243|ribonuclease H1##DQ892597|RNASEH1|246243|ribonuclease H1##DQ895824|RNASEH1|246243|ribonuclease H1##AF048994|RNASEH1|246243|ribonuclease H1##AK096913|RNASEH1|246243|ribonuclease H1##AF048995|RNASEH1|246243|ribonuclease H1##AK075490|RNASEH1|246243|ribonuclease H1	0.0	
chr2	73907445	73907555	reg1027177.p1	4.447	+	AB019551 BC012626 AF187813 NM_003960	-37986	-	TSC_hg19_v1_chr2_+_73613119 AJ417593 AX751581 NM_015120	-294442	+	AB463596 BC136252 BC143379 X60104 BC034462 TSC_hg19_v1_chr2_-_73520677 NM_001965 AK314154	-386860	-	AF185571 BC069564 BC121101 BC121102 NM_016347	20966	-	TSC_hg19_v1_chr2_-_73964473 AK291071 AF060921 AK097254 AY643713 BC029492 AK295239 AF151879 NM_016058	56971	-	CU674166 DQ891356 DQ894537 TSC_hg19_v1_chr2_-_74007231 BC000346 AF023917 AK315271 CR627368 NM_003584	99693	-	AB019551|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##BC012626|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##AF187813|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##NM_003960|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##AJ417593|ALMS1|7840|Alstrom syndrome 1##AX751581|ALMS1|7840|Alstrom syndrome 1##NM_015120|ALMS1|7840|Alstrom syndrome 1##BC136252|EGR4|1961|early growth response 4##BC143379|EGR4|1961|early growth response 4##X60104|EGR4|1961|early growth response 4##BC034462|EGR4|1961|early growth response 4##NM_001965|EGR4|1961|early growth response 4##AK314154|EGR4|1961|early growth response 4##AF185571|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC069564|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC121101|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##BC121102|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##NM_016347|NAT8B|51471|N-acetyltransferase 8B (GCN5-related, putative, gene/pseudogene)##AK291071|TPRKB|51002|TP53RK binding protein##AF060921|TPRKB|51002|TP53RK binding protein##AK097254|TPRKB|51002|TP53RK binding protein##AY643713|TPRKB|51002|TP53RK binding protein##BC029492|TPRKB|51002|TP53RK binding protein##AK295239|TPRKB|51002|TP53RK binding protein##AF151879|TPRKB|51002|TP53RK binding protein##NM_016058|TPRKB|51002|TP53RK binding protein##DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	0.998899	CTCF.p2:5:0.999
chr4	124320021	124320155	reg1016178.p3	4.447	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-2132	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-475836	+	AF019632 AK294450 NM_198041	-475948	-	AK026960 BC063856 NM_005841	585	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	1313726	-	NM_024582	1917478	+	AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AF019632|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK294450|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_198041|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)	0.0	
chr6_qbl_hap6	4324128	4324246	reg1032703.p1	4.447	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.98793	CTCF.p2:-9:0.988
chr1	172359680	172359781	reg1026039.p1	4.446	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-549027	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-608892	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-608916	+	AL035295 NM_139240 BC038410	30098	+	TSC_hg19_v1_chr1_-_172413202 BC006539	53458	-	TSC_hg19_v1_chr1_-_172413207 AK308201	53477	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.0	
chr12	59838859	59838957	reg1030375.p1	4.446	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-524606	-	AY505340 BC126169 BC126171 BC143960 AY358288 NM_153377 TSC_hg19_v1_chr12_-_59314272	-524731	-	AK301162 AY358295 NM_001136051	-525593	-	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	151009	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	244231	+	BC050347 NM_178539	2747675	-	AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2	0.019072	
chr14	106152556	106152656	reg1028907.p2	4.446	+	TSC_hg19_v1_chr14_-_106111114 AJ294731	-41490	-	BC040042 TSC_hg19_v1_chr14_-_106110945	-41683	-	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	-60270	-	TSC_hg19_v1_chr14_-_106174914 BC113815 AJ294729	22347	-	TSC_hg19_v1_chr14_-_106208542 AF487336	55943	-	AF150959 TSC_hg19_v1_chr14_-_106208714 S76144	56104	-	AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AJ294729|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.0	
chr14	72467705	72467886	reg1031051.p1	4.446	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-67929	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-68642	+	AK294895 NM_001204423	-68979	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	893013	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	925340	+	AK098542 AF311602 NM_178441	985862	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.0	
chr22	50965025	50965104	reg1026581.p2	4.446	+	TSC_hg19_v1_chr22_-_50964861 NM_001169109	-185	-	NM_001169110	-491	-	BC102024 BC102025 AL021683 TSC_hg19_v1_chr22_-_50964031 NM_001169111 NM_005138	-1058	-	DQ891456 DQ894634 TSC_hg19_v1_chr22_-_50968202 M63193 NM_001113756	3133	-	TSC_hg19_v1_chr22_-_50968442 BC018160 BC052211 AK057214 AK298691 AK301194 AK314716 AK225269	3377	-	TSC_hg19_v1_chr22_-_50968479 NM_001113755 NM_001953	3432	-	NM_001169109|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##NM_001169110|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##BC102024|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##BC102025|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##AL021683|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##NM_001169111|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##NM_005138|SCO2|9997|SCO cytochrome oxidase deficient homolog 2 (yeast)##DQ891456|TYMP|1890|thymidine phosphorylase##DQ894634|TYMP|1890|thymidine phosphorylase##M63193|TYMP|1890|thymidine phosphorylase##NM_001113756|TYMP|1890|thymidine phosphorylase##BC018160|TYMP|1890|thymidine phosphorylase##BC052211|TYMP|1890|thymidine phosphorylase##AK057214|TYMP|1890|thymidine phosphorylase##AK298691|TYMP|1890|thymidine phosphorylase##AK301194|TYMP|1890|thymidine phosphorylase##AK314716|TYMP|1890|thymidine phosphorylase##AK225269|TYMP|1890|thymidine phosphorylase##NM_001113755|TYMP|1890|thymidine phosphorylase##NM_001953|TYMP|1890|thymidine phosphorylase	0.04245	
chr5	150080157	150080249	reg1024880.p1	4.446	+	AK313873 NM_001122853 NM_133371 AJ300586	-39781	+	Y11072 TSC_hg19_v1_chr5_+_150027841	-52362	+	TSC_hg19_v1_chr5_+_150020221 NM_001109974 NM_007286 AK290178 BC042624 BC146665 AB028952 BC152538 BC142683 AF499136 AF499137	-59910	+	AB463237 AM393639 TSC_hg19_v1_chr5_-_150080561 AK297019	364	-	AL136933 TSC_hg19_v1_chr5_-_150080619 BC003402 AK001152 NM_018047	429	-	AK125973 NM_001135644 AK299517	57910	-	AK313873|MYOZ3|91977|myozenin 3##NM_001122853|MYOZ3|91977|myozenin 3##NM_133371|MYOZ3|91977|myozenin 3##AJ300586|MYOZ3|91977|myozenin 3##Y11072|SYNPO|11346|synaptopodin##NM_001109974|SYNPO|11346|synaptopodin##NM_007286|SYNPO|11346|synaptopodin##AK290178|SYNPO|11346|synaptopodin##BC042624|SYNPO|11346|synaptopodin##BC146665|SYNPO|11346|synaptopodin##AB028952|SYNPO|11346|synaptopodin##BC152538|SYNPO|11346|synaptopodin##BC142683|SYNPO|11346|synaptopodin##AF499136|SYNPO|11346|synaptopodin##AF499137|SYNPO|11346|synaptopodin##AM393639|RBM22|55696|RNA binding motif protein 22##AK297019|RBM22|55696|RNA binding motif protein 22##AL136933|RBM22|55696|RNA binding motif protein 22##BC003402|RBM22|55696|RNA binding motif protein 22##AK001152|RBM22|55696|RNA binding motif protein 22##NM_018047|RBM22|55696|RNA binding motif protein 22##AK125973|DCTN4|51164|dynactin 4 (p62)##NM_001135644|DCTN4|51164|dynactin 4 (p62)##AK299517|DCTN4|51164|dynactin 4 (p62)	0.075267	
chr10	64529529	64529709	reg1028175.p1	4.445	+	AJ505150 NM_199452	-249413	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-395576	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-501080	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	34923	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	35038	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	46478	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.0	
chr11	71410171	71410251	reg1032393.p1	4.445	+	BC130498 BC130502 AB126080 NM_001005405	-116297	-	AB126079 BC137550 BC137566 NM_001012710	-133603	+	NM_005553 X63755 BC101744 AB126078 CU686892 BC069531	-150627	+	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	88396	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	114695	-	AF529416 NM_001002035	134034	+	BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11##AB126079|KRTAP5-10|387273|keratin associated protein 5-10##BC137550|KRTAP5-10|387273|keratin associated protein 5-10##BC137566|KRTAP5-10|387273|keratin associated protein 5-10##NM_001012710|KRTAP5-10|387273|keratin associated protein 5-10##NM_005553|KRTAP5-9|3846|keratin associated protein 5-9##X63755|KRTAP5-9|3846|keratin associated protein 5-9##BC101744|KRTAP5-9|3846|keratin associated protein 5-9##AB126078|KRTAP5-9|3846|keratin associated protein 5-9##BC069531|KRTAP5-9|3846|keratin associated protein 5-9##NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1##BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene##AF529416|DEFB108B|245911|defensin, beta 108B##NM_001002035|DEFB108B|245911|defensin, beta 108B	0.973113	CTCF.p2:-9:0.973
chr12	120907531	120907692	reg1032307.p1	4.445	+	TSC_hg19_v1_chr12_-_120907535 NM_003769	-37	-	TSC_hg19_v1_chr12_-_120907522 AK294254 AK309778	-91	-	AB528895 TSC_hg19_v1_chr12_-_120907495 U30825 BC093971 BC093973 AK290644	-157	-	TSC_hg19_v1_chr12_+_120907672 NM_001037494	34	+	TSC_hg19_v1_chr12_+_120933890 NM_001037495 NM_003746	26256	+	TSC_hg19_v1_chr12_+_120933915 AK311790 AK309022	26302	+	NM_003769|SRSF9|8683|serine/arginine-rich splicing factor 9##AK294254|SRSF9|8683|serine/arginine-rich splicing factor 9##U30825|SRSF9|8683|serine/arginine-rich splicing factor 9##BC093971|SRSF9|8683|serine/arginine-rich splicing factor 9##BC093973|SRSF9|8683|serine/arginine-rich splicing factor 9##AK290644|SRSF9|8683|serine/arginine-rich splicing factor 9##NM_001037494|DYNLL1|8655|dynein, light chain, LC8-type 1##NM_001037495|DYNLL1|8655|dynein, light chain, LC8-type 1##NM_003746|DYNLL1|8655|dynein, light chain, LC8-type 1##AK311790|DYNLL1|8655|dynein, light chain, LC8-type 1	0.980319	CTCF.p2:17:0.980
chr12	121735250	121735431	reg1030219.p2	4.445	+	TSC_hg19_v1_chr12_-_121734549 NM_172226	-715	-	TSC_hg19_v1_chr12_-_121734513 BC026060 AF140507 AF425668 AK300865	-833	-	AF101264 TSC_hg19_v1_chr12_-_121712132 AK024748	-23279	-	TSC_hg19_v1_chr12_-_121735623 AK292072	255	-	AF287630 AF287631 NM_006549 NM_153499 NM_153500 NM_172214 NM_172215 NM_172216	770	-	BC034243 TSC_hg19_v1_chr12_-_121785683	50327	-	NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF101264|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK024748|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK292072|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF287630|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF287631|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_006549|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_153499|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_153500|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172214|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172215|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172216|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##BC034243|ANAPC5|51433|anaphase promoting complex subunit 5	0.046033	
chr12	8543034	8543214	reg1003425.p1	4.445	+	BC042608 AK001270 NM_018088	-162921	-	TSC_hg19_v1_chr12_+_8332811 AK096301 BC048994 AK311411 BC034777	-210298	+	NM_001004328	-217975	+	AK308011 AY321309 NM_001007033 AY365135 BC132933 BC132935	65478	+	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	123107	+	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	150350	-	BC042608|FAM90A1|55138|family with sequence similarity 90, member A1##AK001270|FAM90A1|55138|family with sequence similarity 90, member A1##NM_018088|FAM90A1|55138|family with sequence similarity 90, member A1##AK096301|FAM66C|440078|family with sequence similarity 66, member C##BC048994|FAM66C|440078|family with sequence similarity 66, member C##BC034777|FAM66C|440078|family with sequence similarity 66, member C##NM_001004328|ZNF705A|440077|zinc finger protein 705A##AK308011|CLEC6A|93978|C-type lectin domain family 6, member A##AY321309|CLEC6A|93978|C-type lectin domain family 6, member A##NM_001007033|CLEC6A|93978|C-type lectin domain family 6, member A##AY365135|CLEC6A|93978|C-type lectin domain family 6, member A##BC132933|CLEC6A|93978|C-type lectin domain family 6, member A##BC132935|CLEC6A|93978|C-type lectin domain family 6, member A##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E	0.0	
chr15	90574607	90574787	reg1020804.p1	4.445	+	TSC_hg19_v1_chr15_+_90544707 BC020301 AK094712 NM_198526	-30008	+	AK093274 AX748027 CU691000 TSC_hg19_v1_chr15_-_90456145 AK000495 BC053602 NM_001199058 NM_182616	-118592	-	NM_005829	-137081	-	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	70965	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	71008	-	TSC_hg19_v1_chr15_-_90645713 AK312627	71030	-	BC020301|ZNF710|374655|zinc finger protein 710##AK094712|ZNF710|374655|zinc finger protein 710##NM_198526|ZNF710|374655|zinc finger protein 710##AK093274|C15orf38|348110|chromosome 15 open reading frame 38##AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##BC053602|C15orf38|348110|chromosome 15 open reading frame 38##NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##NM_182616|C15orf38|348110|chromosome 15 open reading frame 38##NM_005829|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial	0.0	
chr16	69220407	69220587	reg1033542.p1	4.445	+	TSC_hg19_v1_chr16_+_69166551 AK027634 AK027675 AK310104 AB075868 BC009348	-53944	+	TSC_hg19_v1_chr16_+_69166532 BX647265 AK074795	-53970	+	TSC_hg19_v1_chr16_+_69166515 NM_032830	-53995	+	TSC_hg19_v1_chr16_+_69221066 BC031058 AF243385 NM_006750 U40572 BC048215 EU831451 EU831538	531	+	TSC_hg19_v1_chr16_+_69345258 AK315026 AF132747 AF159063 AF255952 NM_013245 BC047932 AF112215 CU690536 EU831747	124835	+	TSC_hg19_v1_chr16_-_69364492 AF322879 BC019912 AF239156 NM_022341	143995	-	AK027634|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK027675|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK310104|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AB075868|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##BC009348|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##BX647265|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##AK074795|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##NM_032830|CIRH1A|84916|cirrhosis, autosomal recessive 1A (cirhin)##BC031058|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##AF243385|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##NM_006750|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##U40572|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##BC048215|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##EU831451|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##EU831538|SNTB2|6645|syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)##AK315026|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF132747|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF159063|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF255952|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##NM_013245|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##BC047932|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF112215|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##EU831747|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF322879|PDF|64146|peptide deformylase (mitochondrial)##BC019912|PDF|64146|peptide deformylase (mitochondrial)##AF239156|PDF|64146|peptide deformylase (mitochondrial)##NM_022341|PDF|64146|peptide deformylase (mitochondrial)	0.0	
chr17	70509318	70509422	reg1024156.p2	4.445	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-392130	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-392200	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-392211	+	AK000477 TSC_hg19_v1_chr17_-_70588944	79573	-	AF331643 TSC_hg19_v1_chr17_-_71088816	579446	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	579453	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.068259	
chr1	8374220	8374400	reg1000175.p1	4.445	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-287912	-	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	-287949	-	AB528431 AJ276373 DQ892137 DQ895331 BC012839 TSC_hg19_v1_chr1_-_8075752	-298595	-	NM_001080397	10079	+	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	109707	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	503282	-	NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AJ276373|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ892137|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ895331|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC012839|ERRFI1|54206|ERBB receptor feedback inhibitor 1##NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats	0.0	
chr20	61609183	61609363	reg1026477.p2	4.445	+	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-25148	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-25243	+	TSC_hg19_v1_chr20_+_61569501 NM_017896 BC032120 AK299509 AK000609	-39817	+	BC137288 BC137308 NM_080606	29113	-	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	238250	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	258068	+	AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##NM_017896|C20orf11|54994|chromosome 20 open reading frame 11##BC032120|C20orf11|54994|chromosome 20 open reading frame 11##AK299509|C20orf11|54994|chromosome 20 open reading frame 11##AK000609|C20orf11|54994|chromosome 20 open reading frame 11##BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7	0.0	
chr2	144016846	144017027	reg1006699.p1	4.445	+	TSC_hg19_v1_chr2_+_143886987 AK303490 BC016701 BC038976	-129945	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	-130006	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	-381696	+	NM_024659	977969	-	AY281366 NM_001006636	1035123	-	BC017741 AK291357 TSC_hg19_v1_chr2_-_145090037 BC061699	1073096	-	AK303490|ARHGAP15|55843|Rho GTPase activating protein 15##BC016701|ARHGAP15|55843|Rho GTPase activating protein 15##BC038976|ARHGAP15|55843|Rho GTPase activating protein 15##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_024659|GTDC1|79712|glycosyltransferase-like domain containing 1##AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1##BC017741|GTDC1|79712|glycosyltransferase-like domain containing 1##AK291357|GTDC1|79712|glycosyltransferase-like domain containing 1##BC061699|GTDC1|79712|glycosyltransferase-like domain containing 1	0.0	
chr6	137113866	137114047	reg1005307.p2	4.445	+	TSC_hg19_v1_chr6_-_137113721 AB209093	-214	-	TSC_hg19_v1_chr6_-_137113641 NM_005923 U67156 BC088829	-316	-	BC054503 TSC_hg19_v1_chr6_-_137113611	-346	-	TSC_hg19_v1_chr6_+_137143699 NM_000288 BC031606 U88871	29746	+	TSC_hg19_v1_chr6_+_137143749 U76560 BC006268 AB529018 CR542054 CR542076 CU675317 CU689196	29819	+	AK316095 BC087842 NM_001008783 AK295424	129497	+	AB209093|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##NM_005923|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##U67156|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##BC088829|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##BC054503|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##NM_000288|PEX7|5191|peroxisomal biogenesis factor 7##BC031606|PEX7|5191|peroxisomal biogenesis factor 7##U88871|PEX7|5191|peroxisomal biogenesis factor 7##U76560|PEX7|5191|peroxisomal biogenesis factor 7##BC006268|PEX7|5191|peroxisomal biogenesis factor 7##CR542054|PEX7|5191|peroxisomal biogenesis factor 7##CR542076|PEX7|5191|peroxisomal biogenesis factor 7##AK316095|SLC35D3|340146|solute carrier family 35, member D3##BC087842|SLC35D3|340146|solute carrier family 35, member D3##NM_001008783|SLC35D3|340146|solute carrier family 35, member D3##AK295424|SLC35D3|340146|solute carrier family 35, member D3	0.18828	
chr11	62310517	62310604	reg1007089.p2	4.444	+	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	-124024	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	-205612	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	-205735	+	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	3676	-	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	3754	-	DQ185040 BT006677 CR407625 BC006509 BC006520 CU674184 CU677463 CU680700 BC000384 DQ891103 DQ894284 Z11531 AB527934 BC009865 BC015813 BC018857 BC018853 BC028179 TSC_hg19_v1_chr11_-_62341334 BC013918 AK092787 AK299876 AY542307 BC067738 AK129569 AK129618 AK300729 X63526 AK130026 AK300686 BC031012	30764	-	AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein##DQ185040|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BT006677|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##CR407625|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006509|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006520|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC000384|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ891103|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ894284|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##Z11531|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC009865|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC015813|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018857|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018853|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC028179|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC013918|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK092787|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK299876|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AY542307|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC067738|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129569|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129618|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300729|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##X63526|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK130026|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300686|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC031012|EEF1G|1937|eukaryotic translation elongation factor 1 gamma	0.0	
chr12	101381729	101381830	reg1026305.p1	4.444	+	NM_178826 TSC_hg19_v1_chr12_+_101188522 AK091591 AX747079 AK316105 AK293810	-193225	+	TSC_hg19_v1_chr12_+_100967484 BC043366 NM_174942	-414290	+	TSC_hg19_v1_chr12_+_100967438 AK315189	-414348	+	AK313788 AF536216 AY081220 NM_145913	222220	-	TSC_hg19_v1_chr12_+_101673904 NM_014503 AK307934 AJ006778	292126	+	TSC_hg19_v1_chr12_-_101801573 AK311793 AK302911 AK299062 BC007000 BX537387 NM_001177	419764	-	NM_178826|ANO4|121601|anoctamin 4##AK091591|ANO4|121601|anoctamin 4##AK316105|ANO4|121601|anoctamin 4##AK293810|ANO4|121601|anoctamin 4##BC043366|GAS2L3|283431|growth arrest-specific 2 like 3##NM_174942|GAS2L3|283431|growth arrest-specific 2 like 3##AK315189|GAS2L3|283431|growth arrest-specific 2 like 3##AK313788|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AF536216|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AY081220|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_145913|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_014503|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK307934|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AJ006778|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK311793|ARL1|400|ADP-ribosylation factor-like 1##AK302911|ARL1|400|ADP-ribosylation factor-like 1##AK299062|ARL1|400|ADP-ribosylation factor-like 1##BC007000|ARL1|400|ADP-ribosylation factor-like 1##BX537387|ARL1|400|ADP-ribosylation factor-like 1##NM_001177|ARL1|400|ADP-ribosylation factor-like 1	0.599669	CTCF.p2:-6:0.600
chr15	74696432	74696612	reg1021583.p1	4.444	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-36519	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-37987	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-85617	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	29507	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	29790	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	56925	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.0	
chr15	91141515	91141625	reg1030800.p1	4.444	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-68374	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-210031	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-210064	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	119044	+	NM_002569 X17094	270314	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	286131	+	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene	0.014697	
chr16	10832289	10832470	reg1033238.p2	4.444	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-43614	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	-157889	-	NM_024997 BC137079 BC144468	-309639	+	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	5325	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	80169	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	138733	+	HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator	0.0	
chr17	75458318	75458429	reg1029998.p2	4.444	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-10984	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-11591	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	-11728	+	AK056495 NM_001113495	12951	+	TSC_hg19_v1_chr17_+_75543021 AK096234	84647	+	BC039479 NM_001142640 NM_018996	541909	+	AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C	0.0	
chr4	185274996	185275177	reg1029232.p2	4.444	+	BC035035 AY358676 AK057370 NM_153343	-136021	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-447175	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-447266	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	120595	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	295515	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	295747	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr10	121220992	121221173	reg1033068.p1	4.443	+	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-253821	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-282735	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-282779	-	NM_002925	74962	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	81108	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	135026	-	BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.0	
chr1	144094792	144094944	reg1037459.p1	4.443	+	AK307197 TSC_hg19_v1_chr1_-_143913122 AB096683 NM_207418	-181738	-	HQ258079 BC130376 BC130378 NM_001123068	-327004	-	BC071624 BC132962 AK097058 AK310056 TSC_hg19_v1_chr1_-_143744413 AK310186 AK309393	-350463	-	BC130376 BC130378 AB084917 NM_001135789 NM_001143883 NM_178230	269356	-	BC061517 BC073170 BC009950 BC094809 TSC_hg19_v1_chr1_-_144520932	426063	-	TSC_hg19_v1_chr1_-_144520998 BC063535 BC021732	426138	-	AK307197|FAM72D|728833|family with sequence similarity 72, member D##AB096683|FAM72D|728833|family with sequence similarity 72, member D##NM_207418|FAM72D|728833|family with sequence similarity 72, member D##HQ258079|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##NM_001123068|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC071624|FLJ39739|388685|uncharacterized FLJ39739##BC132962|LOC100286793|100286793|uncharacterized LOC100286793##AK097058|FLJ39739|388685|uncharacterized FLJ39739##AK310056|FLJ39739|388685|uncharacterized FLJ39739##AK310186|FLJ39739|388685|uncharacterized FLJ39739##AK309393|FLJ39739|388685|uncharacterized FLJ39739##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC061517|LOC728855|728855|uncharacterized LOC728855##BC073170|LOC728855|728855|uncharacterized LOC728855##BC009950|LOC728855|728855|uncharacterized LOC728855##BC094809|LOC728855|728855|uncharacterized LOC728855##BC063535|LOC728855|728855|uncharacterized LOC728855##BC021732|LOC728855|728855|uncharacterized LOC728855	0.093325	
chr19	4208903	4209022	reg1029813.p2	4.443	+	NM_133475	-25612	+	TSC_hg19_v1_chr19_-_4182561 DQ896358 EU176413 AB528632 CR457200 CU678868 BC005026 BC000090 BC004218 AK299420 BC028220 AK293348 AK315048 AK301247 AK074810 AK225567 AF233396 NM_001193285 NM_016539	-26417	-	TSC_hg19_v1_chr19_+_4153636 AK313099 AB050902 AK172839 NM_032607 AB073612 BC101504 BC143609 BC143610 BC101508 EU446882	-55295	+	BC015364 L08187 NM_005755 BC046112 AB528398 DQ891589 EU176581 CU677281	20558	+	TSC_hg19_v1_chr19_+_4247086 AK001236 BC000561 AK023988 NM_018074 AF091080	38128	+	AK056268 NM_020209	69635	+	NM_133475|ANKRD24|170961|ankyrin repeat domain 24##DQ896358|SIRT6|51548|sirtuin 6##EU176413|SIRT6|51548|sirtuin 6##CR457200|SIRT6|51548|sirtuin 6##BC005026|SIRT6|51548|sirtuin 6##BC004218|SIRT6|51548|sirtuin 6##AK299420|SIRT6|51548|sirtuin 6##BC028220|SIRT6|51548|sirtuin 6##AK293348|SIRT6|51548|sirtuin 6##AK315048|SIRT6|51548|sirtuin 6##AK301247|SIRT6|51548|sirtuin 6##AK074810|SIRT6|51548|sirtuin 6##AK225567|SIRT6|51548|sirtuin 6##AF233396|SIRT6|51548|sirtuin 6##NM_001193285|SIRT6|51548|sirtuin 6##NM_016539|SIRT6|51548|sirtuin 6##AK313099|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB050902|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AK172839|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##NM_032607|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB073612|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101504|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143609|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143610|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101508|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##EU446882|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC015364|EBI3|10148|Epstein-Barr virus induced 3##L08187|EBI3|10148|Epstein-Barr virus induced 3##NM_005755|EBI3|10148|Epstein-Barr virus induced 3##BC046112|EBI3|10148|Epstein-Barr virus induced 3##DQ891589|EBI3|10148|Epstein-Barr virus induced 3##EU176581|EBI3|10148|Epstein-Barr virus induced 3##AK001236|CCDC94|55702|coiled-coil domain containing 94##BC000561|CCDC94|55702|coiled-coil domain containing 94##AK023988|CCDC94|55702|coiled-coil domain containing 94##NM_018074|CCDC94|55702|coiled-coil domain containing 94##AF091080|CCDC94|55702|coiled-coil domain containing 94##AK056268|SHD|56961|Src homology 2 domain containing transforming protein D##NM_020209|SHD|56961|Src homology 2 domain containing transforming protein D	0.983349	CTCF.p2:-17:0.848
chr19	7813735	7813889	reg1029834.p1	4.443	+	AY042221 AY042222 AY042223 AY042224 AY042225 AY042226 AY042227 AY042228 AY042229 AY042230 AY042231 AY042232 AY042233 AB527563 BC110615 AF290886 AK293089 TSC_hg19_v1_chr19_-_7812421 M98457 AK304190 AK313585 NM_001144893 NM_001144894 NM_001144895 NM_001144896 NM_001144897 NM_001144899 NM_021155	-1383	-	AY203939 BC093691 BC093693 BC143309 AY423706 NM_001244856 NM_198492	-16796	-	BC064417 BC062591 AK223207 BC014108 M14766 TSC_hg19_v1_chr19_-_7767004 AK310707 AK310071 M15059 NM_001220500 NM_002002 X04772	-46808	-	NM_001144904 NM_001144905 NM_001144906 NM_001144907 NM_001144908 NM_001144909 NM_001144910 NM_001144911 NM_014257 AK292278 BC038851 AF290887 AK304499 AK314704 AB015629 AF245219 AK298084 AK023750 BC110614 AY343913 DQ893779 AY042234 AY042235 AY042236 AY042237 AY042238 AY042239 AY042240	14281	+	TSC_hg19_v1_chr19_+_7895113 NM_145245 BC014111	81364	+	NM_001159944 AB449874	97594	+	AY042221|CD209|30835|CD209 molecule##AY042222|CD209|30835|CD209 molecule##AY042223|CD209|30835|CD209 molecule##AY042224|CD209|30835|CD209 molecule##AY042225|CD209|30835|CD209 molecule##AY042226|CD209|30835|CD209 molecule##AY042227|CD209|30835|CD209 molecule##AY042228|CD209|30835|CD209 molecule##AY042229|CD209|30835|CD209 molecule##AY042230|CD209|30835|CD209 molecule##AY042231|CD209|30835|CD209 molecule##AY042232|CD209|30835|CD209 molecule##AY042233|CD209|30835|CD209 molecule##BC110615|CD209|30835|CD209 molecule##AF290886|CD209|30835|CD209 molecule##AK293089|CD209|30835|CD209 molecule##M98457|CD209|30835|CD209 molecule##AK304190|CD209|30835|CD209 molecule##AK313585|CD209|30835|CD209 molecule##NM_001144893|CD209|30835|CD209 molecule##NM_001144894|CD209|30835|CD209 molecule##NM_001144895|CD209|30835|CD209 molecule##NM_001144896|CD209|30835|CD209 molecule##NM_001144897|CD209|30835|CD209 molecule##NM_001144899|CD209|30835|CD209 molecule##NM_021155|CD209|30835|CD209 molecule##AY203939|CLEC4G|339390|C-type lectin domain family 4, member G##BC093691|CLEC4G|339390|C-type lectin domain family 4, member G##BC093693|CLEC4G|339390|C-type lectin domain family 4, member G##BC143309|CLEC4G|339390|C-type lectin domain family 4, member G##AY423706|CLEC4G|339390|C-type lectin domain family 4, member G##NM_001244856|CLEC4G|339390|C-type lectin domain family 4, member G##NM_198492|CLEC4G|339390|C-type lectin domain family 4, member G##BC064417|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC062591|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK223207|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC014108|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M14766|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310707|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310071|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M15059|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_001220500|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_002002|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##X04772|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_001144904|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144905|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144906|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144907|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144908|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144909|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144910|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144911|CLEC4M|10332|C-type lectin domain family 4, member M##NM_014257|CLEC4M|10332|C-type lectin domain family 4, member M##AK292278|CLEC4M|10332|C-type lectin domain family 4, member M##BC038851|CLEC4M|10332|C-type lectin domain family 4, member M##AF290887|CLEC4M|10332|C-type lectin domain family 4, member M##AK304499|CLEC4M|10332|C-type lectin domain family 4, member M##AK314704|CLEC4M|10332|C-type lectin domain family 4, member M##AB015629|CLEC4M|10332|C-type lectin domain family 4, member M##AF245219|CLEC4M|10332|C-type lectin domain family 4, member M##AK298084|CLEC4M|10332|C-type lectin domain family 4, member M##AK023750|CLEC4M|10332|C-type lectin domain family 4, member M##BC110614|CLEC4M|10332|C-type lectin domain family 4, member M##AY343913|CLEC4M|10332|C-type lectin domain family 4, member M##DQ893779|CLEC4M|10332|C-type lectin domain family 4, member M##AY042234|CLEC4M|10332|C-type lectin domain family 4, member M##AY042235|CLEC4M|10332|C-type lectin domain family 4, member M##AY042236|CLEC4M|10332|C-type lectin domain family 4, member M##AY042237|CLEC4M|10332|C-type lectin domain family 4, member M##AY042238|CLEC4M|10332|C-type lectin domain family 4, member M##AY042239|CLEC4M|10332|C-type lectin domain family 4, member M##AY042240|CLEC4M|10332|C-type lectin domain family 4, member M##NM_145245|EVI5L|115704|ecotropic viral integration site 5-like##BC014111|EVI5L|115704|ecotropic viral integration site 5-like##NM_001159944|EVI5L|115704|ecotropic viral integration site 5-like##AB449874|EVI5L|115704|ecotropic viral integration site 5-like	0.989932	CTCF.p2:10:0.990
chr6	159429613	159429702	reg1005332.p1	4.443	+	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-8436	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	-8838	-	TSC_hg19_v1_chr6_-_159420766 BC035675	-8888	-	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	36444	-	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	160773	+	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	684593	-	BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC035675|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial	0.0	
chr6	96371537	96371636	reg1032662.p1	4.443	+	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	-346185	+	TSC_hg19_v1_chr6_-_96025325 BC047582	-346297	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	-2242403	-	NM_006581 AK314966 TSC_hg19_v1_chr6_+_96463867 BC001879 BC036101 AB023021	92281	+	TSC_hg19_v1_chr6_+_96969716 NM_015323 BC015377 AK307651 BC036379 BC028608	598113	+	TSC_hg19_v1_chr6_+_96969734 AB018319 CU690338	598153	+	NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##NM_015323|UFL1|23376|UFM1-specific ligase 1##BC015377|UFL1|23376|UFM1-specific ligase 1##AK307651|UFL1|23376|UFM1-specific ligase 1##BC036379|UFL1|23376|UFM1-specific ligase 1##BC028608|UFL1|23376|UFM1-specific ligase 1##AB018319|UFL1|23376|UFM1-specific ligase 1	0.990674	CTCF.p2:-3:0.991
chr9	118110159	118110312	reg1031587.p1	4.443	+	AB022761 NM_017418	-206139	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-229762	-	AK313619 NM_001244 NM_001252290	-417361	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	805835	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	1339227	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	1339371	+	AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32	0.899798	CTCF.p2:12:0.900
chr11	68823400	68823574	reg1032094.p1	4.442	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-7061	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-7137	+	BC016964 AK098317 TSC_hg19_v1_chr11_-_68780715 AK293469 AK075492 AK122669 AK131068 AK075450 NM_001098515 NM_145015	-42729	-	BC064339 TSC_hg19_v1_chr11_+_68857563	34039	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	238135	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	632369	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##BC016964|MRGPRF|116535|MAS-related GPR, member F##AK098317|MRGPRF|116535|MAS-related GPR, member F##AK293469|MRGPRF|116535|MAS-related GPR, member F##AK075492|MRGPRF|116535|MAS-related GPR, member F##AK122669|MRGPRF|116535|MAS-related GPR, member F##AK131068|MRGPRF|116535|MAS-related GPR, member F##AK075450|MRGPRF|116535|MAS-related GPR, member F##NM_001098515|MRGPRF|116535|MAS-related GPR, member F##NM_145015|MRGPRF|116535|MAS-related GPR, member F##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1	0.010679	
chr17	40761190	40761327	reg1032221.p2	4.442	+	TSC_hg19_v1_chr17_-_40729727 AB528689 GQ851964 GQ851965 AF440240 AB030304 NM_013290 NM_016556 FJ952179 FJ952180 FJ952181 FJ952182 FJ952183 BC008792	-31510	-	TSC_hg19_v1_chr17_+_40719130 AF203978 AK314378 AB527756 BT009812	-42120	+	TSC_hg19_v1_chr17_+_40719119 NM_170607 NM_198204 NM_198205 AF213666 AF213667 AF213668 BC010689 AK290258 AK296114 BC014537 AK000150 AK303221 AK309628 AK315432	-42162	+	BX647175 CU690614 TSC_hg19_v1_chr17_-_40761363	93	-	NM_001070	99	+	TSC_hg19_v1_chr17_-_40761382 AK294791	117	-	GQ851964|PSMC3IP|29893|PSMC3 interacting protein##GQ851965|PSMC3IP|29893|PSMC3 interacting protein##AF440240|PSMC3IP|29893|PSMC3 interacting protein##AB030304|PSMC3IP|29893|PSMC3 interacting protein##NM_013290|PSMC3IP|29893|PSMC3 interacting protein##NM_016556|PSMC3IP|29893|PSMC3 interacting protein##FJ952179|PSMC3IP|29893|PSMC3 interacting protein##FJ952180|PSMC3IP|29893|PSMC3 interacting protein##FJ952181|PSMC3IP|29893|PSMC3 interacting protein##FJ952182|PSMC3IP|29893|PSMC3 interacting protein##FJ952183|PSMC3IP|29893|PSMC3 interacting protein##BC008792|PSMC3IP|29893|PSMC3 interacting protein##AF203978|MLX|6945|MAX-like protein X##AK314378|MLX|6945|MAX-like protein X##BT009812|MLX|6945|MAX-like protein X##NM_170607|MLX|6945|MAX-like protein X##NM_198204|MLX|6945|MAX-like protein X##NM_198205|MLX|6945|MAX-like protein X##AF213666|MLX|6945|MAX-like protein X##AF213667|MLX|6945|MAX-like protein X##AF213668|MLX|6945|MAX-like protein X##BC010689|MLX|6945|MAX-like protein X##AK290258|MLX|6945|MAX-like protein X##AK296114|MLX|6945|MAX-like protein X##BC014537|MLX|6945|MAX-like protein X##AK000150|MLX|6945|MAX-like protein X##AK303221|MLX|6945|MAX-like protein X##AK309628|MLX|6945|MAX-like protein X##AK315432|MLX|6945|MAX-like protein X##BX647175|FAM134C|162427|family with sequence similarity 134, member C##NM_001070|TUBG1|7283|tubulin, gamma 1##AK294791|FAM134C|162427|family with sequence similarity 134, member C	0.045777	
chr6	55750922	55751012	reg1005723.p1	4.442	+	AK291559 TSC_hg19_v1_chr6_-_55740389	-10578	-	TSC_hg19_v1_chr6_-_55740358 M60314 BC027958 NM_021073	-10601	-	CU692876 AL137605 AK293856 BC024194 AK055075 AK297191 AK294210 AK127587 NM_001042406 NM_019036	-307035	-	TSC_hg19_v1_chr6_-_56112233 BC126108 BC143862 BC143863 BC143864 BC143865 AK126586	361269	-	TSC_hg19_v1_chr6_-_56112350 BC045597 AF414088 AL136624 AK313398 NM_030820	361394	-	AF330693 TSC_hg19_v1_chr6_-_56258945	507957	-	AK291559|BMP5|653|bone morphogenetic protein 5##M60314|BMP5|653|bone morphogenetic protein 5##BC027958|BMP5|653|bone morphogenetic protein 5##NM_021073|BMP5|653|bone morphogenetic protein 5##AL137605|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK293856|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##BC024194|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK055075|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK297191|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK294210|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK127587|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_001042406|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_019036|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##BC126108|COL21A1|81578|collagen, type XXI, alpha 1##BC143862|COL21A1|81578|collagen, type XXI, alpha 1##BC143863|COL21A1|81578|collagen, type XXI, alpha 1##BC143864|COL21A1|81578|collagen, type XXI, alpha 1##BC143865|COL21A1|81578|collagen, type XXI, alpha 1##AK126586|COL21A1|81578|collagen, type XXI, alpha 1##BC045597|COL21A1|81578|collagen, type XXI, alpha 1##AF414088|COL21A1|81578|collagen, type XXI, alpha 1##AL136624|COL21A1|81578|collagen, type XXI, alpha 1##AK313398|COL21A1|81578|collagen, type XXI, alpha 1##NM_030820|COL21A1|81578|collagen, type XXI, alpha 1##AF330693|COL21A1|81578|collagen, type XXI, alpha 1	0.0	
chr7	105735405	105735495	reg1030519.p2	4.442	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	-131752	+	TSC_hg19_v1_chr7_+_105517250 AK125261	-218186	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	-218465	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	17231	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	17294	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	17565	-	NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3##AK125261|CDHR3|222256|cadherin-related family member 3##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##X61382|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1	0.433707	CTCF.p2:-22:0.434
chr7	89841054	89841168	reg1028632.p2	4.442	+	AK304076 TSC_hg19_v1_chr7_+_89783791 AF186249	-57299	+	NM_012449 TSC_hg19_v1_chr7_+_89783782 AK308452 BC011802	-57374	+	BC028365 NM_152706	-1416081	-	AF455138 NM_001244944 NM_001244945 NM_152999 AK092666 AX747660 TSC_hg19_v1_chr7_+_89841171 AY008443 AY008444 AY008445 NM_001040665 NM_001244946 AK315043	4	+	AF526382 AY358267 NM_001040666	2022	+	NM_001039706 NM_001160138 AK093991 AK303034 AX748399 BC036351 AK302636 BC141834 BC142655 BC140742 AY349356	33501	+	AK304076|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF186249|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##NM_012449|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK308452|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC011802|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62##AF455138|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244944|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244945|STEAP2|261729|STEAP family member 2, metalloreductase##NM_152999|STEAP2|261729|STEAP family member 2, metalloreductase##AK092666|STEAP2|261729|STEAP family member 2, metalloreductase##AY008443|STEAP2|261729|STEAP family member 2, metalloreductase##AY008444|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040665|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244946|STEAP2|261729|STEAP family member 2, metalloreductase##AK315043|STEAP2|261729|STEAP family member 2, metalloreductase##AF526382|STEAP2|261729|STEAP family member 2, metalloreductase##AY358267|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040666|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001039706|C7orf63|79846|chromosome 7 open reading frame 63##NM_001160138|C7orf63|79846|chromosome 7 open reading frame 63##AK093991|C7orf63|79846|chromosome 7 open reading frame 63##AK303034|C7orf63|79846|chromosome 7 open reading frame 63##BC036351|C7orf63|79846|chromosome 7 open reading frame 63##AK302636|C7orf63|79846|chromosome 7 open reading frame 63##BC141834|C7orf63|79846|chromosome 7 open reading frame 63##BC142655|C7orf63|79846|chromosome 7 open reading frame 63##BC140742|C7orf63|79846|chromosome 7 open reading frame 63##AY349356|C7orf63|79846|chromosome 7 open reading frame 63	0.0	
chr1	160430087	160430211	reg1031814.p1	4.441	+	NM_020335 TSC_hg19_v1_chr1_+_160370394	-59770	+	M96739 AK313700 NM_005598 BC013789	-93285	+	NM_001098398 NM_004371 U24105	-116746	-	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	62880	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	119098	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	119139	-	NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##NM_001098398|COPA|1314|coatomer protein complex, subunit alpha##NM_004371|COPA|1314|coatomer protein complex, subunit alpha##U24105|COPA|1314|coatomer protein complex, subunit alpha##AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule	0.0	
chr1	212780680	212780764	reg1029844.p2	4.441	+	NM_001030287	-42047	+	TSC_hg19_v1_chr1_+_212606264 AF173937 NM_013349 AK074431 AK223135 AY762102 BC008823 AB126219 AF049672	-174410	+	TSC_hg19_v1_chr1_-_212588248 AK297200 NM_001198862 AK024066 NM_018252	-192470	-	NM_001040619 NM_001206484 NM_001206488 NM_001674 TSC_hg19_v1_chr1_+_212782102 AK294296	1313	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	1385	+	NM_001206486 AB066566 AB078026 AB078027 AB528347 AY313926 AY313927 BT006996 CR450334 DQ892723 DQ895972 AB209032	7685	+	NM_001030287|ATF3|467|activating transcription factor 3##AF173937|NENF|29937|neudesin neurotrophic factor##NM_013349|NENF|29937|neudesin neurotrophic factor##AK074431|NENF|29937|neudesin neurotrophic factor##AK223135|NENF|29937|neudesin neurotrophic factor##AY762102|NENF|29937|neudesin neurotrophic factor##BC008823|NENF|29937|neudesin neurotrophic factor##AB126219|NENF|29937|neudesin neurotrophic factor##AF049672|NENF|29937|neudesin neurotrophic factor##AK297200|TMEM206|55248|transmembrane protein 206##NM_001198862|TMEM206|55248|transmembrane protein 206##AK024066|TMEM206|55248|transmembrane protein 206##NM_018252|TMEM206|55248|transmembrane protein 206##NM_001040619|ATF3|467|activating transcription factor 3##NM_001206484|ATF3|467|activating transcription factor 3##NM_001206488|ATF3|467|activating transcription factor 3##NM_001674|ATF3|467|activating transcription factor 3##AK294296|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3##NM_001206486|ATF3|467|activating transcription factor 3##AB066566|ATF3|467|activating transcription factor 3##AB078026|ATF3|467|activating transcription factor 3##AB078027|ATF3|467|activating transcription factor 3##AY313926|ATF3|467|activating transcription factor 3##AY313927|ATF3|467|activating transcription factor 3##BT006996|ATF3|467|activating transcription factor 3##CR450334|ATF3|467|activating transcription factor 3##DQ892723|ATF3|467|activating transcription factor 3##DQ895972|ATF3|467|activating transcription factor 3##AB209032|ATF3|467|activating transcription factor 3	0.0	
chr13	32521366	32521516	reg1036471.p1	4.441	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-100539	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-207728	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-747231	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	84000	+	BC146956 BC146965 NM_001136571	364648	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	368176	+	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset	0.901994	CTCF.p2:-19:0.902
chr15	70365015	70365163	reg1028396.p1	4.441	+	BC015421 TSC_hg19_v1_chr15_-_70341948	-23180	-	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-619868	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-657727	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	25138	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	25154	-	TSC_hg19_v1_chr15_-_70878946 BC040579	513855	-	BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.932178	CTCF.p2:10:0.932
chr17	70418593	70418704	reg1028897.p1	4.441	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-301408	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-301478	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-301489	+	AK000477 TSC_hg19_v1_chr17_-_70588944	170295	-	AF331643 TSC_hg19_v1_chr17_-_71088816	670168	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	670175	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr2	136816818	136816999	reg1033004.p2	4.441	+	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-73692	-	TSC_hg19_v1_chr2_-_136743143 AK222476 BC000629 AK290607 J05032	-73779	-	BT006710 CU674308 DQ890741 DQ893912 TSC_hg19_v1_chr2_-_136743053 CR749809 BC107749 AY762100	-73853	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	56890	-	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	58768	-	TSC_hg19_v1_chr2_+_137523114 AK299929	706208	+	AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK222476|DARS|1615|aspartyl-tRNA synthetase##BC000629|DARS|1615|aspartyl-tRNA synthetase##AK290607|DARS|1615|aspartyl-tRNA synthetase##J05032|DARS|1615|aspartyl-tRNA synthetase##BT006710|DARS|1615|aspartyl-tRNA synthetase##DQ890741|DARS|1615|aspartyl-tRNA synthetase##DQ893912|DARS|1615|aspartyl-tRNA synthetase##CR749809|DARS|1615|aspartyl-tRNA synthetase##BC107749|DARS|1615|aspartyl-tRNA synthetase##AY762100|DARS|1615|aspartyl-tRNA synthetase##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B	0.0	
chr2	6492522	6492702	reg1025674.p2	4.441	+	U23752 AB028641 NM_003108 BC025789 AB464713	-659797	+	AK302299 NM_018436 BC029652	-2786815	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-2850043	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	513288	-	TSC_hg19_v1_chr2_-_7006650 AK308509	514091	-	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	525251	+	U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2	0.0	
chr6	27129732	27129876	reg1028343.p1	4.441	+	BC093849 BC093851 TSC_hg19_v1_chr6_+_27114884 AK312232 AB528147 BC134366 BC148293 NM_080596	-14921	+	AB590085 EU446970 TSC_hg19_v1_chr6_-_27114635 AJ223352 BC051872 BC064959 BC108737 BC000893 AK292062 NM_080593	-15197	-	BC016336 BC075806 AB590709 BC066250 BC067496 BC067497 HQ257982 NM_003495	-22731	+	AK097918 AK314037 NM_005865 AF052514 AK303106 AB590521	85692	+	NM_033482	150206	-	AF352327 AF336874 BC107050 NM_032030	162754	+	BC093849|HIST1H2AH|85235|histone cluster 1, H2ah##BC093851|HIST1H2AH|85235|histone cluster 1, H2ah##AK312232|HIST1H2AH|85235|histone cluster 1, H2ah##BC134366|HIST1H2AH|85235|histone cluster 1, H2ah##BC148293|HIST1H2AH|85235|histone cluster 1, H2ah##NM_080596|HIST1H2AH|85235|histone cluster 1, H2ah##EU446970|HIST1H2BK|85236|histone cluster 1, H2bk##AJ223352|HIST1H2BK|85236|histone cluster 1, H2bk##BC051872|HIST1H2BK|85236|histone cluster 1, H2bk##BC064959|HIST1H2BK|85236|histone cluster 1, H2bk##BC108737|HIST1H2BK|85236|histone cluster 1, H2bk##BC000893|HIST1H2BK|85236|histone cluster 1, H2bk##AK292062|HIST1H2BK|85236|histone cluster 1, H2bk##NM_080593|HIST1H2BK|85236|histone cluster 1, H2bk##BC016336|HIST1H4I|8294|histone cluster 1, H4i##BC075806|HIST1H4I|8294|histone cluster 1, H4i##BC066250|HIST1H4I|8294|histone cluster 1, H4i##BC067496|HIST1H4I|8294|histone cluster 1, H4i##BC067497|HIST1H4I|8294|histone cluster 1, H4i##HQ257982|HIST2H4B|554313|histone cluster 2, H4b##NM_003495|HIST1H4I|8294|histone cluster 1, H4i##AK097918|PRSS16|10279|protease, serine, 16 (thymus)##AK314037|PRSS16|10279|protease, serine, 16 (thymus)##NM_005865|PRSS16|10279|protease, serine, 16 (thymus)##AF052514|PRSS16|10279|protease, serine, 16 (thymus)##AK303106|PRSS16|10279|protease, serine, 16 (thymus)##NM_033482|POM121L2|94026|POM121 membrane glycoprotein-like 2##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83	0.56938	CTCF.p2:15:0.569
chrX	71760300	71760392	reg1028832.p1	4.441	+	U65092 TSC_hg19_v1_chrX_-_71527008 NM_001144886	-233328	-	TSC_hg19_v1_chrX_-_71526721 BC004240 NM_004143	-233631	-	NM_001144885 NM_001144887 TSC_hg19_v1_chrX_-_71525765	-234582	-	AB527476 CU690678 EU446822 EU832800 GQ129378 AF245664 AY429539 BC050433 BC011800 BC023642 AK300895 AJ277724 TSC_hg19_v1_chrX_-_71792667 AK294903 AF212246 AK298767	32318	-	AK074326 AK296641 NM_001166418 NM_001166419 NM_001166420 NM_001166422 NM_001166448 NM_018486	32578	-	X73878 BC104944 BC143499 BC143501 X73874 NM_001122670 NM_001172436 NM_002637 TSC_hg19_v1_chrX_-_71934110	173597	-	U65092|CITED1|4435|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1##NM_001144886|CITED1|4435|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1##BC004240|CITED1|4435|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1##NM_004143|CITED1|4435|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1##NM_001144885|CITED1|4435|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1##NM_001144887|CITED1|4435|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 1##EU446822|HDAC8|55869|histone deacetylase 8##EU832800|HDAC8|55869|histone deacetylase 8##GQ129378|HDAC8|55869|histone deacetylase 8##AF245664|HDAC8|55869|histone deacetylase 8##AY429539|HDAC8|55869|histone deacetylase 8##BC050433|HDAC8|55869|histone deacetylase 8##AK300895|HDAC8|55869|histone deacetylase 8##AJ277724|HDAC8|55869|histone deacetylase 8##AK294903|HDAC8|55869|histone deacetylase 8##AF212246|HDAC8|55869|histone deacetylase 8##AK298767|HDAC8|55869|histone deacetylase 8##AK074326|HDAC8|55869|histone deacetylase 8##AK296641|HDAC8|55869|histone deacetylase 8##NM_001166418|HDAC8|55869|histone deacetylase 8##NM_001166419|HDAC8|55869|histone deacetylase 8##NM_001166420|HDAC8|55869|histone deacetylase 8##NM_001166422|HDAC8|55869|histone deacetylase 8##NM_001166448|HDAC8|55869|histone deacetylase 8##NM_018486|HDAC8|55869|histone deacetylase 8##X73878|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##BC104944|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##BC143499|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##BC143501|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##X73874|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##NM_001122670|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##NM_001172436|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)##NM_002637|PHKA1|5255|phosphorylase kinase, alpha 1 (muscle)	0.084208	
chr13	90347985	90348128	reg1028456.p1	4.440	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-2023187	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-3974617	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-5891556	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	1702848	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	3531371	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	4783770	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.430805	CTCF.p2:45:0.375
chr20	62642294	62642415	reg1022807.p1	4.440	+	TSC_hg19_v1_chr20_+_62612576 AB527848	-29768	+	AF221842 TSC_hg19_v1_chr20_+_62612506 AF026031 AK314310 AB019219 BC001666	-29823	+	TSC_hg19_v1_chr20_+_62612487 AK225993 AK001554	-29877	+	AJ243896 AF270652 BC111390 NM_018419 BC035513 BC038590 BC073971 TSC_hg19_v1_chr20_-_62680993 AB033888	38584	-	NM_198723	46084	+	NM_003195	51655	+	AF221842|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF026031|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK314310|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AB019219|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##BC001666|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK225993|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK001554|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AJ243896|SOX18|54345|SRY (sex determining region Y)-box 18##AF270652|SOX18|54345|SRY (sex determining region Y)-box 18##BC111390|SOX18|54345|SRY (sex determining region Y)-box 18##NM_018419|SOX18|54345|SRY (sex determining region Y)-box 18##BC035513|SOX18|54345|SRY (sex determining region Y)-box 18##BC038590|SOX18|54345|SRY (sex determining region Y)-box 18##BC073971|SOX18|54345|SRY (sex determining region Y)-box 18##AB033888|SOX18|54345|SRY (sex determining region Y)-box 18##NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2	0.0	
chr4	39699467	39699572	reg1029008.p2	4.440	+	TSC_hg19_v1_chr4_-_39640486 AK023351 BC008502 NM_174921 AK307146	-58963	-	TSC_hg19_v1_chr4_+_39529635 AK056558	-169893	+	TSC_hg19_v1_chr4_-_39529187 NM_001184700 NM_001184701 NM_003359	-170344	-	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	285	+	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	279819	-	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	280074	-	AK023351|C4orf34|201895|chromosome 4 open reading frame 34##BC008502|C4orf34|201895|chromosome 4 open reading frame 34##NM_174921|C4orf34|201895|chromosome 4 open reading frame 34##AK307146|C4orf34|201895|chromosome 4 open reading frame 34##NM_001184700|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001184701|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_003359|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	0.0	
chr8	8229339	8229520	reg1024027.p1	4.440	+	TSC_hg19_v1_chr8_-_8175862 AF075060	-53541	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-143287	+	AK292586 NM_001193630	-445571	+	AK122582 NM_001080826	9793	-	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	330269	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	521509	-	AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1	0.0	
chr11	96197120	96197273	reg1028585.p2	4.439	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-74022	+	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	-74154	-	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	-120793	-	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	2694553	+	AB013802 AB013803 NM_175566	3229677	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	4360932	+	AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42	0.987915	CTCF.p2:-17:0.988
chr2	96802406	96802473	reg1037072.p2	4.439	+	NM_000682 AB527942 BC133021 BC136537	-20504	-	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	-101745	-	TSC_hg19_v1_chr2_+_96676311 BC015216	-126115	+	BC107126 AJ537600 BC107127 NM_001002036	1734	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	8515	-	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	8720	-	NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2	0.0	
chr3	192610846	192611026	reg1024647.p1	4.439	+	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	-165571	-	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-484093	-	AY858112 NM_001083308	-1431985	+	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	24700	-	BC036194 BC045582 NM_178496	25005	-	TSC_hg19_v1_chr3_+_192958897 BC048095 NM_020386	347968	+	AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2##BC048095|HRASLS|57110|HRAS-like suppressor##NM_020386|HRASLS|57110|HRAS-like suppressor	0.0	
chr6	11825419	11825562	reg1023819.p2	4.439	+	NM_001143948 NM_032744	-46211	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-286992	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-442950	-	NM_002114	187233	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	465103	+	TSC_hg19_v1_chr6_+_12514301 D28417	688812	+	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr6	149387406	149387542	reg1026364.p2	4.439	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-319265	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-723283	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-723484	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	251629	+	AK315038 NM_015093 AK307650	251967	+	AY340238 NM_001002255 BC130305 HQ258040	334034	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr9	114454149	114454257	reg1030488.p2	4.439	+	BC107574 TSC_hg19_v1_chr9_+_114423894 BC010384 BC016319 U31383 BC072671 BC015206 AB463708 AF493877	-30302	+	TSC_hg19_v1_chr9_+_114423856 NM_001017998 NM_001198664	-30341	+	TSC_hg19_v1_chr9_+_114393648 NM_001015882 NM_004125 AK095452 BC048318 AF447177 BC015391 BT007068 DQ891510 DQ894701	-60588	+	BC041858 AK126055 NM_001080551	67599	-	AL833535 NM_173521	91572	-	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	204911	+	BC107574|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC010384|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC016319|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##U31383|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC072671|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC015206|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##AF493877|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##NM_001017998|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##NM_001198664|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##NM_001015882|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##NM_004125|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##AK095452|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##BC048318|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##AF447177|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##BC015391|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##BT007068|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##DQ891510|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##DQ894701|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##BC041858|C9orf84|158401|chromosome 9 open reading frame 84##AK126055|C9orf84|158401|chromosome 9 open reading frame 84##NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase	0.974717	CTCF.p2:6:0.975
chr10	125312675	125312841	reg1031900.p1	4.438	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-398402	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-398812	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-398860	+	AJ505757 NM_153442 BC112011 BC113462	113119	+	BC137492 BC146862 AY358565 NM_198148	338738	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	539141	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.0	
chr15	52671666	52671847	reg1029308.p2	4.438	+	AF272390 BC144611 BC064841 TSC_hg19_v1_chr15_-_52587968 AK301079 AK304136 NM_018728	-83822	-	AF161352 TSC_hg19_v1_chr15_-_52529707	-142050	-	NM_016194	-188192	-	TSC_hg19_v1_chr15_-_52821078 AB290180 AK303660 AK307600 NM_000259 NM_001142495 U90942 Y07759	149500	-	AK123616 TSC_hg19_v1_chr15_-_52861045 AJ223091 CR457132 AK311751	189303	-	TSC_hg19_v1_chr15_-_52861228 AF084555 BC003418 NM_006628	189476	-	AF272390|MYO5C|55930|myosin VC##BC144611|MYO5C|55930|myosin VC##BC064841|MYO5C|55930|myosin VC##AK301079|MYO5C|55930|myosin VC##AK304136|MYO5C|55930|myosin VC##NM_018728|MYO5C|55930|myosin VC##AF161352|MYO5C|55930|myosin VC##NM_016194|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AB290180|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK303660|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK307600|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_000259|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_001142495|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##U90942|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##Y07759|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK123616|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AJ223091|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##CR457132|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK311751|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AF084555|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC003418|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##NM_006628|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa	0.0	
chr17	56024312	56024439	reg1033213.p1	4.438	+	AK000746 NM_017949	-43626	-	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	-96971	-	AK093888 AX748353 NM_170721	-690002	+	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	8301	-	TSC_hg19_v1_chr17_+_56065413 AB593183	41099	+	AB464342 D28118 TSC_hg19_v1_chr17_-_56065593	41159	-	AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC056882|CUEDC1|404093|CUE domain containing 1##D28118|VEZF1|7716|vascular endothelial zinc finger 1	0.0	
chr17	72734325	72734435	reg1006150.p4	4.438	+	TSC_hg19_v1_chr17_+_72733394 AK098068 NM_001006638 NM_001163990 AK298033 AK296172 BC016615	-1001	+	NM_001163989 TSC_hg19_v1_chr17_+_72733040 AK303442 AB528695	-1327	+	AF251706 AY303545 AK315165 TSC_hg19_v1_chr17_-_72709081 AK298752 AY358545 AK092757 AX747710 NM_139018 BC028199	-25313	-	TSC_hg19_v1_chr17_+_72744766 NM_004252 AK094467 AK128474 AK026581 BC049220	10380	+	TSC_hg19_v1_chr17_+_72744790 BC003361 AF015926 BC011777 BC053350	10404	+	TSC_hg19_v1_chr17_+_72744800 BC001443	10417	+	AK098068|RAB37|326624|RAB37, member RAS oncogene family##NM_001006638|RAB37|326624|RAB37, member RAS oncogene family##NM_001163990|RAB37|326624|RAB37, member RAS oncogene family##AK296172|RAB37|326624|RAB37, member RAS oncogene family##BC016615|RAB37|326624|RAB37, member RAS oncogene family##NM_001163989|RAB37|326624|RAB37, member RAS oncogene family##AK303442|RAB37|326624|RAB37, member RAS oncogene family##AF251706|CD300LF|146722|CD300 molecule-like family member f##AY303545|CD300LF|146722|CD300 molecule-like family member f##AK315165|CD300LF|146722|CD300 molecule-like family member f##AK298752|CD300LF|146722|CD300 molecule-like family member f##AY358545|CD300LF|146722|CD300 molecule-like family member f##AK092757|CD300LF|146722|CD300 molecule-like family member f##NM_139018|CD300LF|146722|CD300 molecule-like family member f##BC028199|CD300LF|146722|CD300 molecule-like family member f##NM_004252|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK094467|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK128474|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AK026581|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC049220|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC003361|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##AF015926|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC011777|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC053350|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1##BC001443|SLC9A3R1|9368|solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1	0.0	
chr18	69452138	69452259	reg1033101.p2	4.438	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-1495937	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-1496031	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-1579260	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	758577	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	759532	-	AF448839 NM_138999	1080735	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.668591	CTCF.p2:14:0.669
chr2	119786068	119786169	reg1028428.p1	4.438	+	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	-86298	+	NM_001426	-180360	-	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-940055	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	130286	-	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	195267	+	TSC_hg19_v1_chr2_+_119981409 AF423424 AK001691 AY029585 AY214461 BX538047 AK291608 AF238864 AF262322 AY082673 BC095421 BC042150	195309	+	BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##NM_001426|EN1|2019|engrailed homeobox 1##AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase##AF423424|STEAP3|55240|STEAP family member 3, metalloreductase##AK001691|STEAP3|55240|STEAP family member 3, metalloreductase##AY029585|STEAP3|55240|STEAP family member 3, metalloreductase##AY214461|STEAP3|55240|STEAP family member 3, metalloreductase##BX538047|STEAP3|55240|STEAP family member 3, metalloreductase##AK291608|STEAP3|55240|STEAP family member 3, metalloreductase##AF238864|STEAP3|55240|STEAP family member 3, metalloreductase##AF262322|STEAP3|55240|STEAP family member 3, metalloreductase##AY082673|STEAP3|55240|STEAP family member 3, metalloreductase##BC095421|STEAP3|55240|STEAP family member 3, metalloreductase##BC042150|STEAP3|55240|STEAP family member 3, metalloreductase	0.373095	CTCF.p2:17:0.373
chr4	2632818	2632901	reg1039472.p1	4.438	+	AB000459 AB000460 AB000461 NM_003704 BC136646 BC144337 BC144339 BC144340	-5686	+	NM_001185009 BC031935	-161679	+	TSC_hg19_v1_chr4_+_2470846 AK312534 AK309509 U95140	-161983	+	AK026176 NM_001161527	124891	-	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	125204	-	TSC_hg19_v1_chr4_+_2794755 AK225497 NM_001122681 BC022996	161876	+	AB000459|FAM193A|8603|family with sequence similarity 193, member A##AB000460|FAM193A|8603|family with sequence similarity 193, member A##AB000461|FAM193A|8603|family with sequence similarity 193, member A##NM_003704|FAM193A|8603|family with sequence similarity 193, member A##BC136646|FAM193A|8603|family with sequence similarity 193, member A##BC144337|FAM193A|8603|family with sequence similarity 193, member A##BC144339|FAM193A|8603|family with sequence similarity 193, member A##BC144340|FAM193A|8603|family with sequence similarity 193, member A##NM_001185009|RNF4|6047|ring finger protein 4##BC031935|RNF4|6047|ring finger protein 4##AK312534|RNF4|6047|ring finger protein 4##AK309509|RNF4|6047|ring finger protein 4##U95140|RNF4|6047|ring finger protein 4##AK026176|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001161527|TNIP2|79155|TNFAIP3 interacting protein 2##AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2##AK225497|SH3BP2|6452|SH3-domain binding protein 2##NM_001122681|SH3BP2|6452|SH3-domain binding protein 2##BC022996|SH3BP2|6452|SH3-domain binding protein 2	0.036773	
chr4	77871454	77871536	reg1032656.p2	4.438	+	TSC_hg19_v1_chr4_+_77871005 AK001711 AL110300 AK302700 BC063615 GU727629 AB587498	-495	+	TSC_hg19_v1_chr4_+_77870908 BC064934	-583	+	TSC_hg19_v1_chr4_+_77870905 BC008083 NM_018243	-610	+	AK124592 CR627457 TSC_hg19_v1_chr4_+_77954068	82510	+	TSC_hg19_v1_chr4_-_77997145 BC000420 BC004975 NM_006835 AB209766 AK301111 AK312632	125657	-	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	206866	+	AK001711|SEPT11|55752|septin 11##AL110300|SEPT11|55752|septin 11##AK302700|SEPT11|55752|septin 11##BC063615|SEPT11|55752|septin 11##GU727629|SEPT11|55752|septin 11##BC064934|SEPT11|55752|septin 11##BC008083|SEPT11|55752|septin 11##NM_018243|SEPT11|55752|septin 11##AK124592|SEPT11|55752|septin 11##BC000420|CCNI|10983|cyclin I##BC004975|CCNI|10983|cyclin I##NM_006835|CCNI|10983|cyclin I##AB209766|CCNI|10983|cyclin I##AK301111|CCNI|10983|cyclin I##AK312632|CCNI|10983|cyclin I##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2	0.0	
chrX	118172649	118172774	reg1031020.p1	4.438	+	TSC_hg19_v1_chrX_+_118109314 AK026265	-63373	+	TSC_hg19_v1_chrX_+_118108607 BC098283 BC099847 BC100671 BC103491 NM_001031855 NM_024778	-64058	+	TSC_hg19_v1_chrX_+_118108580 AK091777 AK290198 AX747177	-64131	+	NM_020721	111830	-	TSC_hg19_v1_chrX_+_118370247 NM_006667 AK313956 Y12711 BC034238 AK293618 DQ891774 DQ894958 CR456993	197554	+	NM_145305 TSC_hg19_v1_chrX_+_118533308 AK094254 BC071871	360576	+	AK026265|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC098283|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC099847|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC100671|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##BC103491|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_001031855|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_024778|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK091777|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK290198|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##NM_020721|KIAA1210|57481|KIAA1210##NM_006667|PGRMC1|10857|progesterone receptor membrane component 1##AK313956|PGRMC1|10857|progesterone receptor membrane component 1##Y12711|PGRMC1|10857|progesterone receptor membrane component 1##BC034238|PGRMC1|10857|progesterone receptor membrane component 1##AK293618|PGRMC1|10857|progesterone receptor membrane component 1##DQ891774|PGRMC1|10857|progesterone receptor membrane component 1##DQ894958|PGRMC1|10857|progesterone receptor membrane component 1##CR456993|PGRMC1|10857|progesterone receptor membrane component 1##NM_145305|SLC25A43|203427|solute carrier family 25, member 43##AK094254|SLC25A43|203427|solute carrier family 25, member 43##BC071871|SLC25A43|203427|solute carrier family 25, member 43	0.201661	CTCF.p2:1:0.202
chr10	6309452	6309571	reg1015683.p2	4.437	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-64635	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-122599	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-122627	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	312750	-	TSC_hg19_v1_chr10_+_6622460 AY007155	312969	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	1141739	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.0	
chr12	4371344	4371525	reg1034858.p2	4.437	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-388934	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-509052	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-509166	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	11610	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	58957	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	117366	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.0	
chr2	65166925	65167055	reg1028536.p2	4.437	+	TSC_hg19_v1_chr2_-_65159574 BC037562	-7413	-	TSC_hg19_v1_chr2_-_65090764 AK097952	-76249	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-285943	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	48610	+	TSC_hg19_v1_chr2_+_65216485 AK298472 AK315986 NM_003038	49501	+	TSC_hg19_v1_chr2_+_65216532 AK223486 AK313052 BC072423 BC026216 L14595 L19444 AB026689 DQ891127 DQ894306	49660	+	BC037562|LOC400958|400958|uncharacterized LOC400958##D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK223486|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK313052|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC072423|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC026216|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L14595|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L19444|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AB026689|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ891127|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ894306|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.0	
chr6_cox_hap2	4266391	4266502	reg1033605.p2	4.437	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.08447	
chr8	110656885	110657016	reg1028389.p3	4.437	+	AY705385 AB384607 TSC_hg19_v1_chr8_-_110656972	-21	-	NM_001099756	-1532	-	AK297182 TSC_hg19_v1_chr8_-_110620232	-36724	-	BC012082 AK090559 AK096558 TSC_hg19_v1_chr8_-_110657047 NM_001099753 NM_001099754 NM_001099755	87	-	AK055246 NM_001099751 NM_001099752	833	-	AL713645 AB195676 AB195677 AB195678 NM_001099747 NM_001099748 NM_001099749 NM_001099750 NM_017786	4119	-	AY705385|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099756|SYBU|55638|syntabulin (syntaxin-interacting)##AK297182|SYBU|55638|syntabulin (syntaxin-interacting)##BC012082|SYBU|55638|syntabulin (syntaxin-interacting)##AK090559|SYBU|55638|syntabulin (syntaxin-interacting)##AK096558|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099753|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099754|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099755|SYBU|55638|syntabulin (syntaxin-interacting)##AK055246|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099751|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099752|SYBU|55638|syntabulin (syntaxin-interacting)##AL713645|SYBU|55638|syntabulin (syntaxin-interacting)##AB195676|SYBU|55638|syntabulin (syntaxin-interacting)##AB195677|SYBU|55638|syntabulin (syntaxin-interacting)##AB195678|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099747|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099748|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099749|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099750|SYBU|55638|syntabulin (syntaxin-interacting)##NM_017786|SYBU|55638|syntabulin (syntaxin-interacting)	0.063502	
chr10	45950479	45950552	reg1030140.p2	4.436	+	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	-80818	+	TSC_hg19_v1_chr10_+_45869638 AB208946 NM_000698 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223	-80878	+	AK131555 NM_001004297	-139460	-	AK313340 BC025394 NM_001002266 AK307667	80304	-	TSC_hg19_v1_chr10_-_46090318 BC066988 NM_001002265 NM_145021	139779	-	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	217699	-	BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase##AB208946|ALOX5|240|arachidonate 5-lipoxygenase##NM_000698|ALOX5|240|arachidonate 5-lipoxygenase##AK225603|ALOX5|240|arachidonate 5-lipoxygenase##BC130332|ALOX5|240|arachidonate 5-lipoxygenase##BC132677|ALOX5|240|arachidonate 5-lipoxygenase##BC143985|ALOX5|240|arachidonate 5-lipoxygenase##BC143986|ALOX5|240|arachidonate 5-lipoxygenase##AK315223|ALOX5|240|arachidonate 5-lipoxygenase##AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##AK313340|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC025394|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002266|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK307667|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC066988|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002265|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_145021|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4	0.0	
chr12	92886222	92886342	reg1030833.p1	4.436	+	AJ845168 NM_001025232	-64359	-	AJ845165 AJ845166 NM_001025233	-68548	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-346639	-	NM_001037671 NM_001178097	210336	+	NM_001004330 AK128530	244005	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	436656	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr13	111260250	111260430	reg1027541.p2	4.436	+	AJ272065 CU693106 DQ892145 DQ895340 TSC_hg19_v1_chr13_-_111214042 AK000436 AK000446 NM_017817 BC026025	-46368	-	X05610 TSC_hg19_v1_chr13_+_111154089	-106289	+	TSC_hg19_v1_chr13_+_111138079 M24766	-122252	+	TSC_hg19_v1_chr13_+_111267870 NM_001242882 NM_001242883	7490	+	TSC_hg19_v1_chr13_+_111267898 AK093771 AK298917 AX748297 AK302117 AK057767 AK296758 NM_001242881 NM_018210 AK296227 AK024260 BC041028 AK001631 AK225129	7702	+	TSC_hg19_v1_chr13_-_111268694 AK095260	8358	-	AJ272065|RAB20|55647|RAB20, member RAS oncogene family##DQ892145|RAB20|55647|RAB20, member RAS oncogene family##DQ895340|RAB20|55647|RAB20, member RAS oncogene family##AK000436|RAB20|55647|RAB20, member RAS oncogene family##AK000446|RAB20|55647|RAB20, member RAS oncogene family##NM_017817|RAB20|55647|RAB20, member RAS oncogene family##BC026025|RAB20|55647|RAB20, member RAS oncogene family##X05610|COL4A2|1284|collagen, type IV, alpha 2##M24766|COL4A2|1284|collagen, type IV, alpha 2##NM_001242882|CARKD|55739|carbohydrate kinase domain containing##NM_001242883|CARKD|55739|carbohydrate kinase domain containing##AK093771|CARKD|55739|carbohydrate kinase domain containing##AK298917|CARKD|55739|carbohydrate kinase domain containing##AK302117|CARKD|55739|carbohydrate kinase domain containing##AK057767|CARKD|55739|carbohydrate kinase domain containing##AK296758|CARKD|55739|carbohydrate kinase domain containing##NM_001242881|CARKD|55739|carbohydrate kinase domain containing##NM_018210|CARKD|55739|carbohydrate kinase domain containing##AK296227|CARKD|55739|carbohydrate kinase domain containing##AK024260|CARKD|55739|carbohydrate kinase domain containing##BC041028|CARKD|55739|carbohydrate kinase domain containing##AK001631|CARKD|55739|carbohydrate kinase domain containing##AK225129|CARKD|55739|carbohydrate kinase domain containing	0.0	
chr15	72956414	72956511	reg1033096.p1	4.436	+	NM_018652	-9425	+	TSC_hg19_v1_chr15_+_72766706 AB209432 BC051877	-189746	+	TSC_hg19_v1_chr15_+_72766670 AJ243190 NM_005744 AK312715	-189795	+	NM_001252678 NM_033028 TSC_hg19_v1_chr15_+_72978547 AK303706 AF359281 AK298922 AK314507 BX647855 BC027624 AK075321 AK302224 AB528022 DQ891519 DQ894709	22081	+	BC037410 TSC_hg19_v1_chr15_-_73051778	95252	-	TSC_hg19_v1_chr15_-_73076054 CU675251 EU831454 EU831541 BC018074	119578	-	NM_018652|GOLGA6B|55889|golgin A6 family, member B##AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##NM_001252678|BBS4|585|Bardet-Biedl syndrome 4##NM_033028|BBS4|585|Bardet-Biedl syndrome 4##AK303706|BBS4|585|Bardet-Biedl syndrome 4##AF359281|BBS4|585|Bardet-Biedl syndrome 4##AK298922|BBS4|585|Bardet-Biedl syndrome 4##AK314507|BBS4|585|Bardet-Biedl syndrome 4##BX647855|BBS4|585|Bardet-Biedl syndrome 4##BC027624|BBS4|585|Bardet-Biedl syndrome 4##AK075321|BBS4|585|Bardet-Biedl syndrome 4##AK302224|BBS4|585|Bardet-Biedl syndrome 4##DQ891519|BBS4|585|Bardet-Biedl syndrome 4##DQ894709|BBS4|585|Bardet-Biedl syndrome 4##EU831454|ADPGK|83440|ADP-dependent glucokinase##EU831541|ADPGK|83440|ADP-dependent glucokinase##BC018074|ADPGK|83440|ADP-dependent glucokinase	0.835639	CTCF.p2:4:0.836
chr19	53400727	53400863	reg1031640.p1	4.436	+	NM_207333	-6197	-	TSC_hg19_v1_chr19_-_53360854 AX721127 CR936599 AK292449 CR936695 AK289841 AY442330 AY442331 NM_001008801 NM_199132	-39919	-	CR933598 AK304704 BC070146 AK293074 NM_006969	-75893	-	BC105738 TSC_hg19_v1_chr19_-_53400887 AK307375	106	-	BC105739 BC105740 BC105930 AK316503 AK291990 BC063805 TSC_hg19_v1_chr19_-_53466117 CR749224 NM_001031665 NM_001202456 NM_001202457 NM_001202473	65296	-	NM_152473	116548	+	NM_207333|ZNF320|162967|zinc finger protein 320##CR936599|ZNF468|90333|zinc finger protein 468##AK292449|ZNF468|90333|zinc finger protein 468##CR936695|ZNF468|90333|zinc finger protein 468##AK289841|ZNF468|90333|zinc finger protein 468##AY442330|ZNF468|90333|zinc finger protein 468##AY442331|ZNF468|90333|zinc finger protein 468##NM_001008801|ZNF468|90333|zinc finger protein 468##NM_199132|ZNF468|90333|zinc finger protein 468##CR933598|ZNF28|7576|zinc finger protein 28##AK304704|ZNF28|7576|zinc finger protein 28##BC070146|ZNF28|7576|zinc finger protein 28##AK293074|ZNF28|7576|zinc finger protein 28##NM_006969|ZNF28|7576|zinc finger protein 28##BC105738|ZNF320|162967|zinc finger protein 320##BC105739|ZNF816|125893|zinc finger protein 816##BC105740|ZNF816|125893|zinc finger protein 816##BC105930|ZNF816|125893|zinc finger protein 816##AK316503|ZNF816-ZNF321P|100529240|ZNF816-ZNF321P readthrough##AK291990|ZNF816|125893|zinc finger protein 816##BC063805|ZNF816|125893|zinc finger protein 816##CR749224|ZNF816-ZNF321P|100529240|ZNF816-ZNF321P readthrough##NM_001031665|ZNF816|125893|zinc finger protein 816##NM_001202456|ZNF816|125893|zinc finger protein 816##NM_001202457|ZNF816|125893|zinc finger protein 816##NM_001202473|ZNF816-ZNF321P|100529240|ZNF816-ZNF321P readthrough##NM_152473|ERVV-1|147664|endogenous retrovirus group V, member 1	0.0	
chr19	56289089	56289238	reg1034265.p2	4.436	+	NM_001145014	-18657	+	AY154464 BC136583 NM_176820	-39410	-	AF073727 NM_001130071	-101173	+	AK315003 NM_134444	58780	+	BC036506 NM_145007 AK097646	58983	-	AB527194 AY154468 NM_176810	154525	-	NM_001145014|RFPL4A|342931|ret finger protein-like 4A##AY154464|NLRP9|338321|NLR family, pyrin domain containing 9##BC136583|NLRP9|338321|NLR family, pyrin domain containing 9##NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9##AF073727|EPN1|29924|epsin 1##NM_001130071|EPN1|29924|epsin 1##AK315003|NLRP4|147945|NLR family, pyrin domain containing 4##NM_134444|NLRP4|147945|NLR family, pyrin domain containing 4##BC036506|NLRP11|204801|NLR family, pyrin domain containing 11##NM_145007|NLRP11|204801|NLR family, pyrin domain containing 11##AY154468|NLRP13|126204|NLR family, pyrin domain containing 13##NM_176810|NLRP13|126204|NLR family, pyrin domain containing 13	0.954214	CTCF.p2:-33:0.954
chr8	42123695	42123875	reg1026193.p2	4.436	+	AK289387 AK290575 NM_000930 NM_033011 TSC_hg19_v1_chr8_-_42065195	-58591	-	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	-58697	-	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	-113252	+	TSC_hg19_v1_chr8_+_42128819 NM_001190720 NM_001242778 NM_001556	5023	+	TSC_hg19_v1_chr8_+_42128832 AK303528	5042	+	TSC_hg19_v1_chr8_+_42128835 AK302723 AK303294 AK316418 BC006231 AK091297 AK309052	5050	+	AK289387|PLAT|5327|plasminogen activator, tissue##AK290575|PLAT|5327|plasminogen activator, tissue##NM_000930|PLAT|5327|plasminogen activator, tissue##NM_033011|PLAT|5327|plasminogen activator, tissue##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue##NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_001190720|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001242778|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001556|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK303528|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK302723|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK303294|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK316418|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC006231|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK091297|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	0.0	
chr9	132307303	132307399	reg1043902.p1	4.436	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	-55910	+	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	-55997	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-224056	+	BC112353 AK093122 AX747938 NM_199350	75686	-	TSC_hg19_v1_chr9_+_132388441 NM_014064 AK290957 AK292332 AK298840 AK307056 AK313829	81074	+	TSC_hg19_v1_chr9_+_132388461 BC001396 BC033234 AF110776	81119	+	BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50##NM_014064|METTL11A|28989|methyltransferase like 11A##AK290957|METTL11A|28989|methyltransferase like 11A##AK292332|METTL11A|28989|methyltransferase like 11A##AK298840|METTL11A|28989|methyltransferase like 11A##AK307056|METTL11A|28989|methyltransferase like 11A##AK313829|METTL11A|28989|methyltransferase like 11A##BC001396|METTL11A|28989|methyltransferase like 11A##BC033234|METTL11A|28989|methyltransferase like 11A##AF110776|METTL11A|28989|methyltransferase like 11A	0.0	
chr11	10772764	10772930	reg1029034.p2	4.435	+	TSC_hg19_v1_chr11_+_10772795 BC014335 AK291794 BC020951 BC058914 NM_014633 D63875	-20	+	TSC_hg19_v1_chr11_-_10715507 NM_001100163 NM_001206880 NM_001206881 NM_130385	-57329	-	TSC_hg19_v1_chr11_-_10715300 AK296336	-57538	-	BC065276 NM_001172705 BX647799 AK123338	56727	-	TSC_hg19_v1_chr11_+_10829631 AK055888	56754	+	TSC_hg19_v1_chr11_-_10830044 AK302886 AK310738	57209	-	BC014335|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK291794|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC058914|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##NM_014633|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##D63875|CTR9|9646|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##NM_001100163|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001206880|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_001206881|MRVI1|10335|murine retrovirus integration site 1 homolog##NM_130385|MRVI1|10335|murine retrovirus integration site 1 homolog##AK296336|MRVI1|10335|murine retrovirus integration site 1 homolog##BC065276|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##NM_001172705|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##BX647799|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK123338|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK055888|LOC144017|144017|uncharacterized LOC144017##AK302886|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK310738|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	0.0	
chr11	113644776	113644892	reg1024410.p2	4.435	+	TSC_hg19_v1_chr11_-_113644486 NM_004724	-350	-	TSC_hg19_v1_chr11_-_113644447 AK300746 AK312925	-384	-	TSC_hg19_v1_chr11_-_113644415 U54996 BC128264	-423	-	NM_001101389	5683	+	TSC_hg19_v1_chr11_+_113659972 AK093353 AX748073	15114	+	TSC_hg19_v1_chr11_-_113746251 CU688104 AF266283 BC065928 AK304376 NM_020886 AK304770 AK097623	101457	-	NM_004724|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AK300746|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AK312925|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##U54996|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##BC128264|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##NM_001101389|CLDN25|644672|claudin 25##AK093353|LOC390251|390251|SH3-domain GRB2-like 1 pseudogene##AF266283|USP28|57646|ubiquitin specific peptidase 28##BC065928|USP28|57646|ubiquitin specific peptidase 28##AK304376|USP28|57646|ubiquitin specific peptidase 28##NM_020886|USP28|57646|ubiquitin specific peptidase 28##AK304770|USP28|57646|ubiquitin specific peptidase 28##AK097623|USP28|57646|ubiquitin specific peptidase 28	0.622286	CTCF.p2:0:0.622
chr16	53133021	53133157	reg1032189.p1	4.435	+	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	-44208	+	AK299202 NM_001146188	-551376	-	NM_001080430	-552284	-	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	10	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	31971	+	NM_001207030	271951	-	AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_001207030|LOC643802|643802|u3 small nucleolar ribonucleoprotein protein MPP10-like	0.0	
chr18	26541761	26541860	reg1028067.p1	4.435	+	TSC_hg19_v1_chr18_-_25757363 NM_001792	-784413	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	-784773	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-1776577	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	2080892	-	CR749226 TSC_hg19_v1_chr18_-_28681542	2139678	-	TSC_hg19_v1_chr18_-_28682275 EF017811 EF017812 X56807 AK297029 AK290313 BX648425 BC063291 NM_004949 NM_024422	2140381	-	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3##CR749226|DSC2|1824|desmocollin 2##EF017811|DSC2|1824|desmocollin 2##EF017812|DSC2|1824|desmocollin 2##X56807|DSC2|1824|desmocollin 2##AK297029|DSC2|1824|desmocollin 2##AK290313|DSC2|1824|desmocollin 2##BX648425|DSC2|1824|desmocollin 2##BC063291|DSC2|1824|desmocollin 2##NM_004949|DSC2|1824|desmocollin 2##NM_024422|DSC2|1824|desmocollin 2	0.780967	CTCF.p2:-25:0.781
chr2	197623782	197623903	reg1026857.p2	4.435	+	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	-119485	+	BC117194 BC117198 AB037722 NM_020760	-166550	-	TSC_hg19_v1_chr2_-_197036310 NM_004226	-587524	-	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	40571	-	BC137150 BC137151 AY358249 NM_213608	51095	-	AB128038 AB527353 TSC_hg19_v1_chr2_-_197791382 BX648642 AK022439 NM_024989 BC040517	167602	-	AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_004226|STK17B|9262|serine/threonine kinase 17b##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66##AB128038|PGAP1|80055|post-GPI attachment to proteins 1##BX648642|PGAP1|80055|post-GPI attachment to proteins 1##AK022439|PGAP1|80055|post-GPI attachment to proteins 1##NM_024989|PGAP1|80055|post-GPI attachment to proteins 1##BC040517|PGAP1|80055|post-GPI attachment to proteins 1	0.638069	CTCF.p2:-51:0.638
chr7	90225565	90225631	reg1028806.p2	4.435	+	TSC_hg19_v1_chr7_+_90032774 AL136770 BC016061	-192794	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	-192894	+	TSC_hg19_v1_chr7_+_89976015 AF351613 NM_001042717 NM_033107 AK095561 BC107714 CR933597 AK294325 BC144162	-249594	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	211	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	113185	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	113562	+	AL136770|CLDN12|9069|claudin 12##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12##AF351613|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001042717|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_033107|GTPBP10|85865|GTP-binding protein 10 (putative)##AK095561|GTPBP10|85865|GTP-binding protein 10 (putative)##BC107714|GTPBP10|85865|GTP-binding protein 10 (putative)##CR933597|GTPBP10|85865|GTP-binding protein 10 (putative)##AK294325|GTPBP10|85865|GTP-binding protein 10 (putative)##BC144162|GTPBP10|85865|GTP-binding protein 10 (putative)##AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14	0.167226	
chrX	106242331	106242412	reg1024474.p1	4.435	+	TSC_hg19_v1_chrX_+_106171329 AY358474 BC014424 AB463528 DQ892216 DQ895412 AF250558	-70978	+	NM_020384 BC071747 AK075405 AK075371	-78704	+	AK312515 NM_001171095	-80782	+	EF125209 TSC_hg19_v1_chrX_-_106243332	913	-	TSC_hg19_v1_chrX_-_106243443 EF125210 NM_001085354 NM_024657	1103	-	TSC_hg19_v1_chrX_-_106362035 AK001878 BC006986	119661	-	AY358474|CLDN2|9075|claudin 2##BC014424|CLDN2|9075|claudin 2##DQ892216|CLDN2|9075|claudin 2##DQ895412|CLDN2|9075|claudin 2##AF250558|CLDN2|9075|claudin 2##NM_020384|CLDN2|9075|claudin 2##BC071747|CLDN2|9075|claudin 2##AK075405|CLDN2|9075|claudin 2##AK075371|CLDN2|9075|claudin 2##AK312515|CLDN2|9075|claudin 2##NM_001171095|CLDN2|9075|claudin 2##EF125209|MORC4|79710|MORC family CW-type zinc finger 4##EF125210|MORC4|79710|MORC family CW-type zinc finger 4##NM_001085354|MORC4|79710|MORC family CW-type zinc finger 4##NM_024657|MORC4|79710|MORC family CW-type zinc finger 4##AK001878|RBM41|55285|RNA binding motif protein 41##BC006986|RBM41|55285|RNA binding motif protein 41	0.0	
chr12	11903399	11903552	reg1031430.p2	4.434	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-100489	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-100701	+	TSC_hg19_v1_chr12_+_11802659 AK289441	-100802	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	320408	+	AF281254 AF281255 NM_030766 NM_138722	320926	+	AK074543 TSC_hg19_v1_chr12_-_12291395	387909	-	U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AK289441|ETV6|2120|ets variant 6##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6	0.0	
chr19	42375760	42375940	reg1032572.p1	4.434	+	TSC_hg19_v1_chr19_+_42364325 AK311786 BC017386 D28389 M81757	-11520	+	TSC_hg19_v1_chr19_+_42364273 BC000023	-11574	+	BC018616 NM_001022	-11863	+	NM_001783 NM_021601 AK223371 M80462 M86921 AK315337 BC113731 BC113733 S46706 HQ258131 M74721 S75217 S79248 X83540	5431	+	BC064996 TSC_hg19_v1_chr19_+_42387266 NM_004706 NM_198977 BC011726	11427	+	TSC_hg19_v1_chr19_+_42387309 U64105	11468	+	AK311786|RPS19|6223|ribosomal protein S19##BC017386|RPS19|6223|ribosomal protein S19##M81757|RPS19|6223|ribosomal protein S19##BC000023|RPS19|6223|ribosomal protein S19##BC018616|RPS19|6223|ribosomal protein S19##NM_001022|RPS19|6223|ribosomal protein S19##NM_001783|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##NM_021601|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##AK223371|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##M80462|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##M86921|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##AK315337|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##BC113731|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##BC113733|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##S46706|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##HQ258131|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##M74721|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##S75217|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##S79248|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##X83540|CD79A|973|CD79a molecule, immunoglobulin-associated alpha##BC064996|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_004706|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##NM_198977|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##BC011726|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1##U64105|ARHGEF1|9138|Rho guanine nucleotide exchange factor (GEF) 1	0.031168	
chr6	1364510	1364637	reg1035967.p1	4.434	+	BC053850 NM_033260	-51899	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-671483	-	AF508547 BC101697 BC101699 NM_148959	-707620	-	NM_001452 U13220 AB463646	25552	+	BC134421 NM_001453	246107	+	TSC_hg19_v1_chr6_+_1611545 BC169307	247001	+	BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##BC169307|FOXC1|2296|forkhead box C1	0.968654	CTCF.p2:-13:0.969
chr8	95834963	95835110	reg1028881.p1	4.434	+	TSC_hg19_v1_chr8_+_95732206 BC126193 BC130576	-102826	+	TSC_hg19_v1_chr8_+_95732105 NM_181787 AK123682 BX538174 BX538048 BC110870	-102896	+	TSC_hg19_v1_chr8_+_95653401 BC099916 BC067098 BC019932 BC052574	-181592	+	TSC_hg19_v1_chr8_+_95835522 BC099915 AB161944 NM_017864	512	+	TSC_hg19_v1_chr8_+_95835588 BC136754 BC144396 BC144397	664	+	TSC_hg19_v1_chr8_-_95907430 BC007015 BC020729 NM_057749	72416	-	BC126193|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC130576|DPY19L4|286148|dpy-19-like 4 (C. elegans)##NM_181787|DPY19L4|286148|dpy-19-like 4 (C. elegans)##AK123682|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BX538174|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BX538048|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC110870|DPY19L4|286148|dpy-19-like 4 (C. elegans)##BC099916|ESRP1|54845|epithelial splicing regulatory protein 1##BC067098|ESRP1|54845|epithelial splicing regulatory protein 1##BC019932|ESRP1|54845|epithelial splicing regulatory protein 1##BC052574|ESRP1|54845|epithelial splicing regulatory protein 1##BC099915|INTS8|55656|integrator complex subunit 8##AB161944|INTS8|55656|integrator complex subunit 8##NM_017864|INTS8|55656|integrator complex subunit 8##BC136754|INTS8|55656|integrator complex subunit 8##BC144396|INTS8|55656|integrator complex subunit 8##BC144397|INTS8|55656|integrator complex subunit 8##BC007015|CCNE2|9134|cyclin E2##BC020729|CCNE2|9134|cyclin E2##NM_057749|CCNE2|9134|cyclin E2	0.0	
chr10	89071419	89071562	reg1030383.p2	4.433	+	BC092519 NM_001099338 AB095940	-86260	+	TSC_hg19_v1_chr10_+_88854962 AK022978 NM_019054	-216557	+	TSC_hg19_v1_chr10_-_88854695 NM_005271	-216730	-	TSC_hg19_v1_chr10_-_89102098 AK091716	30606	-	TSC_hg19_v1_chr10_-_89102128 AK309777 AK311174	30651	-	TSC_hg19_v1_chr10_-_89102214 BC047063	30768	-	BC092519|FAM22A|728118|family with sequence similarity 22, member A##NM_001099338|FAM22A|728118|family with sequence similarity 22, member A##AB095940|FAM22D|728130|family with sequence similarity 22, member D##AK022978|FAM35A|54537|family with sequence similarity 35, member A##NM_019054|FAM35A|54537|family with sequence similarity 35, member A##NM_005271|GLUD1|2746|glutamate dehydrogenase 1##AK309777|LOC728190|728190|uncharacterized LOC728190##AK311174|LOC728190|728190|uncharacterized LOC728190##BC047063|LOC728190|728190|uncharacterized LOC728190	0.984009	CTCF.p2:-10:0.984
chr1	112297726	112297899	reg1012695.p1	4.433	+	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	-15857	-	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	-135345	+	BC041707 BC064411 NM_001081976	-191233	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	407	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	623	-	TSC_hg19_v1_chr1_+_112298524 AK301697 AK001506 BC031062 BC011556 AF106019 AF155803 AK314312 DQ892249 DQ895449 CU679958	737	+	AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B##NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B##AK301697|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK001506|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC031062|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC011556|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF106019|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF155803|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK314312|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ892249|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ895449|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	0.0	
chr1	235503197	235503302	reg1029666.p1	4.433	+	AK309831 TSC_hg19_v1_chr1_+_235492306	-10954	+	NM_001037277 TSC_hg19_v1_chr1_+_235491884 AF057698 AK025139 BC005252 AK293278 AB019036 AB016043 AF125394	-11388	+	TSC_hg19_v1_chr1_-_235491495 AF214114 AK057552 NM_016374 NM_031371	-11737	-	NM_001079515 NM_003193 TSC_hg19_v1_chr1_+_235530744 AK296185 AK298050	27494	+	TSC_hg19_v1_chr1_+_235530768 AK093397 AK292287 BC008654	27523	+	TSC_hg19_v1_chr1_-_235667473 AK091497	164260	-	NM_001037277|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AF057698|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AK025139|GGPS1|9453|geranylgeranyl diphosphate synthase 1##BC005252|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AK293278|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AB019036|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AB016043|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AF125394|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AF214114|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##AK057552|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##NM_016374|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##NM_031371|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##NM_001079515|TBCE|6905|tubulin folding cofactor E##NM_003193|TBCE|6905|tubulin folding cofactor E##AK296185|TBCE|6905|tubulin folding cofactor E##AK298050|TBCE|6905|tubulin folding cofactor E##AK093397|TBCE|6905|tubulin folding cofactor E##AK292287|TBCE|6905|tubulin folding cofactor E##BC008654|TBCE|6905|tubulin folding cofactor E##AK091497|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2	0.033142	
chr14	72943625	72943796	reg1033369.p2	4.433	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-543844	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-544557	+	AK294895 NM_001204423	-544894	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	417098	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	449425	+	AK098542 AF311602 NM_178441	509947	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.0	
chr17	1626473	1626607	reg1026264.p2	4.433	+	AK298567 NM_001163673 NM_152348 AK091136 AX746799 BC114519 BC114568	-6685	+	BC119720 BC119721 TSC_hg19_v1_chr17_-_1619503 BX648321 BX640650	-7052	-	NM_001164407	-12879	-	AK127946 NM_001163811 TSC_hg19_v1_chr17_+_1628006	1380	+	TSC_hg19_v1_chr17_+_1628049 NM_001163809	1538	+	TSC_hg19_v1_chr17_+_1631333 AL834379 BC092513	4825	+	AK298567|WDR81|124997|WD repeat domain 81##NM_001163673|WDR81|124997|WD repeat domain 81##NM_152348|WDR81|124997|WD repeat domain 81##AK091136|WDR81|124997|WD repeat domain 81##BC114519|WDR81|124997|WD repeat domain 81##BC114568|WDR81|124997|WD repeat domain 81##BC119720|MIR22HG|84981|MIR22 host gene (non-protein coding)##BC119721|MIR22HG|84981|MIR22 host gene (non-protein coding)##BX648321|MIR22HG|84981|MIR22 host gene (non-protein coding)##BX640650|MIR22HG|84981|MIR22 host gene (non-protein coding)##NM_001164407|TLCD2|727910|TLC domain containing 2##AK127946|WDR81|124997|WD repeat domain 81##NM_001163811|WDR81|124997|WD repeat domain 81##NM_001163809|WDR81|124997|WD repeat domain 81##AL834379|WDR81|124997|WD repeat domain 81##BC092513|WDR81|124997|WD repeat domain 81	0.679534	CTCF.p2:-2:0.680
chr6	122806173	122806272	reg1030712.p1	4.433	+	NM_181794 CR749456 AJ420562	-13151	+	CU688532 CU689596 AL137261 TSC_hg19_v1_chr6_-_122792947 AF164794 AB033079 BC014412 BC028607 BC033029 NM_020755 AK075339 AY358429 AK128781 AF087902	-13269	-	TSC_hg19_v1_chr6_+_122720796 AK225593 AK225594 BC112323 M65217 AK294624 BC005329 BC064622 BC121050 BC121051 BC128420 AK316377 AB463722 CU675115 EU446897	-85406	+	NM_032471 NM_181795	125154	+	BC093027 TSC_hg19_v1_chr6_+_122931549 BC036011 AF087873 AK315151	125358	+	NM_001446 TSC_hg19_v1_chr6_+_123100743 BC012299	294477	+	NM_181794|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AJ420562|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AL137261|SERINC1|57515|serine incorporator 1##AF164794|SERINC1|57515|serine incorporator 1##AB033079|SERINC1|57515|serine incorporator 1##BC014412|SERINC1|57515|serine incorporator 1##BC028607|SERINC1|57515|serine incorporator 1##BC033029|SERINC1|57515|serine incorporator 1##NM_020755|SERINC1|57515|serine incorporator 1##AK075339|SERINC1|57515|serine incorporator 1##AY358429|SERINC1|57515|serine incorporator 1##AF087902|SERINC1|57515|serine incorporator 1##AK225593|HSF2|3298|heat shock transcription factor 2##AK225594|HSF2|3298|heat shock transcription factor 2##BC112323|HSF2|3298|heat shock transcription factor 2##M65217|HSF2|3298|heat shock transcription factor 2##AK294624|HSF2|3298|heat shock transcription factor 2##BC005329|HSF2|3298|heat shock transcription factor 2##BC064622|HSF2|3298|heat shock transcription factor 2##BC121050|HSF2|3298|heat shock transcription factor 2##BC121051|HSF2|3298|heat shock transcription factor 2##BC128420|HSF2|3298|heat shock transcription factor 2##AK316377|HSF2|3298|heat shock transcription factor 2##EU446897|HSF2|3298|heat shock transcription factor 2##NM_032471|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_181795|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##BC093027|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##BC036011|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AF087873|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AK315151|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_001446|FABP7|2173|fatty acid binding protein 7, brain##BC012299|FABP7|2173|fatty acid binding protein 7, brain	0.197886	
chr6	52284718	52284899	reg1030569.p1	4.433	+	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	-57851	+	TSC_hg19_v1_chr6_-_52149551 D38073 AK299566 NM_002388 AK301704	-135229	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	-135288	-	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	270	+	AK297632 NM_001172420	996	+	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	156950	-	NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##D38073|MCM3|4172|minichromosome maintenance complex component 3##AK299566|MCM3|4172|minichromosome maintenance complex component 3##NM_002388|MCM3|4172|minichromosome maintenance complex component 3##AK301704|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3##NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2	0.0	
chr7	48915052	48915165	reg1029974.p2	4.433	+	AK126220 AY204751 BX647273 NM_152701	-704053	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-786153	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	-786308	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	898162	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	1217716	-	NM_001161834	1220573	+	AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72	0.992	CTCF.p2:-4:0.992
chr8	102806066	102806247	reg1032769.p2	4.433	+	NM_032041	-2718	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-2956	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-2973	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	330367	-	NM_001040630	330978	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	445017	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.0	
chr9	132769663	132769819	reg1025194.p1	4.433	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-171976	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-172019	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-172057	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	35613	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	35747	-	BC039728 NM_001136557 NM_001136558 NM_020960	46243	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr10	127665908	127666041	reg1032690.p2	4.432	+	NM_145235 BC024189 CR627249 TSC_hg19_v1_chr10_+_127585124 AY358154 AK304407 DQ786222	-80818	+	TSC_hg19_v1_chr10_-_127585056 BC068471	-80944	-	AK001751 AY064250 AF427340 NM_018180	-96107	-	AK291629 TSC_hg19_v1_chr10_-_128076950	410977	-	AY358878 AF023476 AF023477 TSC_hg19_v1_chr10_-_128077049 AK127856	411057	-	TSC_hg19_v1_chr10_-_128077062 BC060804	411090	-	NM_145235|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##BC024189|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##CR627249|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##AY358154|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##BC068471|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AK001751|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AY064250|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AF427340|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##NM_018180|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AK291629|ADAM12|8038|ADAM metallopeptidase domain 12##AY358878|ADAM12|8038|ADAM metallopeptidase domain 12##AF023476|ADAM12|8038|ADAM metallopeptidase domain 12##AF023477|ADAM12|8038|ADAM metallopeptidase domain 12##AK127856|ADAM12|8038|ADAM metallopeptidase domain 12##BC060804|ADAM12|8038|ADAM metallopeptidase domain 12	0.891291	CTCF.p2:-6:0.891
chr1	27435751	27435845	reg1029906.p1	4.432	+	TSC_hg19_v1_chr1_-_27339448 AK122816	-96344	-	BC012790 BC014160 NM_052943 TSC_hg19_v1_chr1_-_27339338	-96464	-	TSC_hg19_v1_chr1_+_27320182 NM_001013642 BC069216	-115605	+	M96066 S68616 NM_003047 TSC_hg19_v1_chr1_-_27481521	45663	-	NM_015023 TSC_hg19_v1_chr1_+_27561056	125236	+	TSC_hg19_v1_chr1_+_27561124 AK315564	125329	+	AK122816|FAM46B|115572|family with sequence similarity 46, member B##BC012790|FAM46B|115572|family with sequence similarity 46, member B##BC014160|FAM46B|115572|family with sequence similarity 46, member B##NM_052943|FAM46B|115572|family with sequence similarity 46, member B##NM_001013642|TRNP1|388610|TMF1-regulated nuclear protein 1##BC069216|TRNP1|388610|TMF1-regulated nuclear protein 1##M96066|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##S68616|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_003047|SLC9A1|6548|solute carrier family 9 (sodium/hydrogen exchanger), member 1##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1	0.697792	CTCF.p2:3:0.698
chr14	24038091	24038182	reg1031820.p1	4.432	+	AF068706 NM_003917	-864	-	TSC_hg19_v1_chr14_-_24036998 BX161425 AB015318 AK307696 AK309103	-1135	-	BX247963 BC051833 TSC_hg19_v1_chr14_-_24036719 AK304682 AK310451	-1494	-	AK290511 TSC_hg19_v1_chr14_-_24047453	9331	-	TSC_hg19_v1_chr14_-_24047779 AK091572 AX747068	9662	-	BC055429 TSC_hg19_v1_chr14_-_24048004 AB058734 NM_001146028 NM_032452	9864	-	AF068706|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##NM_003917|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##BX161425|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AB015318|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK307696|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK309103|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##BX247963|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##BC051833|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK304682|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK310451|AP1G2|8906|adaptor-related protein complex 1, gamma 2 subunit##AK290511|JPH4|84502|junctophilin 4##AK091572|JPH4|84502|junctophilin 4##BC055429|JPH4|84502|junctophilin 4##AB058734|JPH4|84502|junctophilin 4##NM_001146028|JPH4|84502|junctophilin 4##NM_032452|JPH4|84502|junctophilin 4	0.875956	CTCF.p2:-6:0.876
chr14	68875718	68875787	reg1016615.p2	4.432	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-589232	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-592453	-	AK315462 NM_152443	-707150	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	383968	-	NM_001244698 NM_004926	384878	-	NM_001244701 AB528867	387232	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr1	63793365	63793481	reg1031086.p2	4.432	+	TSC_hg19_v1_chr1_+_63789065 L12142	-4339	+	AB464527 NM_012183	-4694	+	TSC_hg19_v1_chr1_+_63249807 NM_032852 NM_178221 AK027773 BC018678 BC033024 BC008395	-543610	+	NM_013339 AF063604 TSC_hg19_v1_chr1_+_63833313	39864	+	AK022700 TSC_hg19_v1_chr1_+_63833329 BC001253 AF102851	39907	+	AK309622 AF175306 BC009929 TSC_hg19_v1_chr1_-_63988878 BC014385 AK312944 NM_001206739 NM_014288	195458	-	L12142|FOXD3|27022|forkhead box D3##NM_012183|FOXD3|27022|forkhead box D3##NM_032852|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_178221|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##AK027773|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC018678|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC033024|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC008395|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_013339|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF063604|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AK022700|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##BC001253|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF102851|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AK309622|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AF175306|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##BC009929|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##BC014385|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##AK312944|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##NM_001206739|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)##NM_014288|ITGB3BP|23421|integrin beta 3 binding protein (beta3-endonexin)	0.983471	CTCF.p2:12:0.983
chr17	71088837	71089017	reg1028241.p2	4.432	+	TSC_hg19_v1_chr17_-_71088832 NM_001159770 NM_139177	-79	-	BC035631 TSC_hg19_v1_chr17_-_71088831	-96	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	-104	-	TSC_hg19_v1_chr17_+_71161148 AK290745 BC019610 NM_001050 AK313866	72217	+	TSC_hg19_v1_chr17_+_71189175 NM_018714	100233	+	TSC_hg19_v1_chr17_+_71189196 AK098224	100264	+	NM_001159770|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##NM_139177|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK290745|SSTR2|6752|somatostatin receptor 2##BC019610|SSTR2|6752|somatostatin receptor 2##NM_001050|SSTR2|6752|somatostatin receptor 2##AK313866|SSTR2|6752|somatostatin receptor 2##NM_018714|COG1|9382|component of oligomeric golgi complex 1##AK098224|COG1|9382|component of oligomeric golgi complex 1	0.0	
chr17	8857770	8857908	reg1031008.p1	4.432	+	AY725853 AF128881 NM_014308	-42023	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-86855	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-155287	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	11142	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	67128	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	621292	-	AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8	0.0	
chr19	46850690	46850785	reg1028470.p1	4.432	+	TSC_hg19_v1_chr19_+_46850348 AB527518 AK293402 AK297095 BT007275 BC000750 BC001831 X89416 U25174	-378	+	TSC_hg19_v1_chr19_+_46850343 NM_001204284 NM_006247 BC001970 AK223222 AK312683	-443	+	AK021881 TSC_hg19_v1_chr19_+_46844054	-6729	+	AK297668 AL136609 JN703457 NM_032040	66134	-	AL834344 TSC_hg19_v1_chr19_-_46974751 AK290218 BC051688	123985	-	TSC_hg19_v1_chr19_-_46974789 BC032508 NM_001103149 NM_018215	124068	-	AK293402|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK297095|PPP5C|5536|protein phosphatase 5, catalytic subunit##BT007275|PPP5C|5536|protein phosphatase 5, catalytic subunit##BC000750|PPP5C|5536|protein phosphatase 5, catalytic subunit##BC001831|PPP5C|5536|protein phosphatase 5, catalytic subunit##X89416|PPP5C|5536|protein phosphatase 5, catalytic subunit##U25174|PPP5C|5536|protein phosphatase 5, catalytic subunit##NM_001204284|PPP5C|5536|protein phosphatase 5, catalytic subunit##NM_006247|PPP5C|5536|protein phosphatase 5, catalytic subunit##BC001970|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK223222|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK312683|PPP5C|5536|protein phosphatase 5, catalytic subunit##AK021881|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK297668|CCDC8|83987|coiled-coil domain containing 8##AL136609|CCDC8|83987|coiled-coil domain containing 8##JN703457|CCDC8|83987|coiled-coil domain containing 8##NM_032040|CCDC8|83987|coiled-coil domain containing 8##AL834344|PNMAL1|55228|PNMA-like 1##AK290218|PNMAL1|55228|PNMA-like 1##BC051688|PNMAL1|55228|PNMA-like 1##BC032508|PNMAL1|55228|PNMA-like 1##NM_001103149|PNMAL1|55228|PNMA-like 1##NM_018215|PNMAL1|55228|PNMA-like 1	1.027407	CTCF.p2:34:0.993
chr7	25894299	25894431	reg1034976.p1	4.432	+	AB040290 AF330057 AF440392 NM_022150	-626285	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-674494	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-729425	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	297568	+	TSC_hg19_v1_chr7_-_26232151 BX538099	337786	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	345976	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.542841	CTCF.p2:-10:0.543
chr2	172379001	172379144	reg1025957.p2	4.431	+	TSC_hg19_v1_chr2_+_172379020 NM_001127383 NM_024843 AK128495 AK316588 AL136693 BC016900 AK291731 AK027115 AK225459 BC065290 HQ257890	-117	+	AK301485 TSC_hg19_v1_chr2_+_172378762	-313	+	TSC_hg19_v1_chr2_-_172374248 AB055776	-4826	-	TSC_hg19_v1_chr2_+_172543981 BX537412 AK055491 NM_001378 AK225759 BC091498 AY037160 AK308008 AK298561	164952	+	TSC_hg19_v1_chr2_+_172544264 AK096579 AK075323 AF250307 BC109375 AF134477 AK316119 BC015038	165219	+	AB527259 DQ891540 EU176607 TSC_hg19_v1_chr2_-_172750755 AK091071 BC016932 AJ496568 Y14494 AK022828 AK294638 NM_003705	371711	-	NM_001127383|CYBRD1|79901|cytochrome b reductase 1##NM_024843|CYBRD1|79901|cytochrome b reductase 1##AK128495|CYBRD1|79901|cytochrome b reductase 1##AK316588|CYBRD1|79901|cytochrome b reductase 1##AL136693|CYBRD1|79901|cytochrome b reductase 1##BC016900|CYBRD1|79901|cytochrome b reductase 1##AK291731|CYBRD1|79901|cytochrome b reductase 1##AK027115|CYBRD1|79901|cytochrome b reductase 1##AK225459|CYBRD1|79901|cytochrome b reductase 1##BC065290|CYBRD1|79901|cytochrome b reductase 1##HQ257890|CYBRD1|79901|cytochrome b reductase 1##AK301485|CYBRD1|79901|cytochrome b reductase 1##BX537412|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK055491|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##NM_001378|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK225759|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC091498|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AY037160|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK308008|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK298561|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK096579|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK075323|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF250307|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC109375|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AF134477|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##AK316119|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##BC015038|DYNC1I2|1781|dynein, cytoplasmic 1, intermediate chain 2##DQ891540|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##EU176607|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK091071|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##BC016932|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AJ496568|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##Y14494|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK022828|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##AK294638|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12##NM_003705|SLC25A12|8604|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	0.0	
chr22	18038151	18038285	reg1006585.p1	4.431	+	TSC_hg19_v1_chr22_-_17747522 AF277398	-290647	-	AK314321 TSC_hg19_v1_chr22_-_17700267 AK295174 AK292689	-337855	-	AF190746 NM_017424	-347440	-	TSC_hg19_v1_chr22_+_18043149 AJ428203 AY008285 NM_031481 BC031644 AK308974 AK095706 AK309110	5001	+	BT007128 CU012943 CU013231 EU831478 EU831565 AB528072 CR456385 X71491 TSC_hg19_v1_chr22_-_18111488 X76228 BC004443	73227	-	TSC_hg19_v1_chr22_-_18111509 AK312394	73288	-	AF277398|CECR3|27442|cat eye syndrome chromosome region, candidate 3 (non-protein coding)##AK314321|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK295174|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK292689|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF190746|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_017424|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AJ428203|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AY008285|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##NM_031481|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BC031644|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK308974|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK095706|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK309110|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BT007128|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU012943|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU013231|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831478|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831565|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CR456385|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X71491|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X76228|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##BC004443|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##AK312394|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1	0.181007	
chr8	53025201	53025306	reg1008711.p2	4.431	+	AK299452 TSC_hg19_v1_chr8_+_52812239	-213030	+	TSC_hg19_v1_chr8_-_52811724 NM_052937	-213526	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	-213651	-	BC026316 AB011107 AK311188 BC031075 NM_014682 BC025662	297067	-	BC130641 BC130643 BC144534 AY358213 NM_207413	452740	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	601733	-	NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC130641|FAM150A|389658|family with sequence similarity 150, member A##BC130643|FAM150A|389658|family with sequence similarity 150, member A##BC144534|FAM150A|389658|family with sequence similarity 150, member A##AY358213|FAM150A|389658|family with sequence similarity 150, member A##NM_207413|FAM150A|389658|family with sequence similarity 150, member A##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1	0.0	
chr15	52672134	52672251	reg1029308.p3	4.430	+	AF272390 BC144611 BC064841 TSC_hg19_v1_chr15_-_52587968 AK301079 AK304136 NM_018728	-84258	-	AF161352 TSC_hg19_v1_chr15_-_52529707	-142486	-	NM_016194	-188628	-	TSC_hg19_v1_chr15_-_52821078 AB290180 AK303660 AK307600 NM_000259 NM_001142495 U90942 Y07759	149064	-	AK123616 TSC_hg19_v1_chr15_-_52861045 AJ223091 CR457132 AK311751	188867	-	TSC_hg19_v1_chr15_-_52861228 AF084555 BC003418 NM_006628	189040	-	AF272390|MYO5C|55930|myosin VC##BC144611|MYO5C|55930|myosin VC##BC064841|MYO5C|55930|myosin VC##AK301079|MYO5C|55930|myosin VC##AK304136|MYO5C|55930|myosin VC##NM_018728|MYO5C|55930|myosin VC##AF161352|MYO5C|55930|myosin VC##NM_016194|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AB290180|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK303660|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK307600|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_000259|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_001142495|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##U90942|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##Y07759|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK123616|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AJ223091|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##CR457132|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK311751|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AF084555|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC003418|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##NM_006628|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa	0.051695	
chr15	83002259	83002386	reg1033380.p1	4.430	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-57432	+	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	-57530	+	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	-177429	-	CR936602 NM_001164465	15856	-	NM_198181 CR936812	96419	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	206914	-	BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17	0.024936	
chr1	64386624	64386781	reg1033806.p2	4.430	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	-147043	+	NM_001172818 AK300100	-297809	+	AK293298 NM_001172819 AK298505	-327188	+	BC029895 NM_152489	282787	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	549816	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	824097	+	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_020925|CACHD1|57685|cache domain containing 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2	0.733614	CTCF.p2:-41:0.734
chr17	73670948	73671128	reg1007519.p1	4.430	+	NM_013260 TSC_hg19_v1_chr17_+_73663441 AK095265 AK298060 BC030233 AY082382 BC007592 AF119664 BC063793 AK002202 AK310177 BC011724 AB464187 AF087869 CU675719 EU446793 BC013409 AK023157	-7605	+	BC063440 EF560729 TSC_hg19_v1_chr17_-_73663235 BC016911 AK075084 AK304168 AB042823 AB042824 AB042825 NM_001003715 NM_001003716 NM_004259	-7790	-	BC062771 NM_001162997 AK131023	-28357	+	NM_000213 NM_001005731 X53587 TSC_hg19_v1_chr17_+_73717539	46493	+	TSC_hg19_v1_chr17_+_73717581 X51841 BC126411 BC143738 BC143742 AK304792 AK310952	46535	+	BC118916 TSC_hg19_v1_chr17_+_73717603 AB208913	46563	+	NM_013260|SAP30BP|29115|SAP30 binding protein##AK095265|SAP30BP|29115|SAP30 binding protein##AK298060|SAP30BP|29115|SAP30 binding protein##BC030233|SAP30BP|29115|SAP30 binding protein##AY082382|SAP30BP|29115|SAP30 binding protein##BC007592|SAP30BP|29115|SAP30 binding protein##AF119664|SAP30BP|29115|SAP30 binding protein##BC063793|SAP30BP|29115|SAP30 binding protein##AK002202|SAP30BP|29115|SAP30 binding protein##AK310177|SAP30BP|29115|SAP30 binding protein##BC011724|SAP30BP|29115|SAP30 binding protein##AF087869|SAP30BP|29115|SAP30 binding protein##EU446793|SAP30BP|29115|SAP30 binding protein##BC013409|SAP30BP|29115|SAP30 binding protein##AK023157|SAP30BP|29115|SAP30 binding protein##BC063440|RECQL5|9400|RecQ protein-like 5##EF560729|RECQL5|9400|RecQ protein-like 5##BC016911|RECQL5|9400|RecQ protein-like 5##AK075084|RECQL5|9400|RecQ protein-like 5##AK304168|RECQL5|9400|RecQ protein-like 5##AB042823|RECQL5|9400|RecQ protein-like 5##AB042824|RECQL5|9400|RecQ protein-like 5##AB042825|RECQL5|9400|RecQ protein-like 5##NM_001003715|RECQL5|9400|RecQ protein-like 5##NM_001003716|RECQL5|9400|RecQ protein-like 5##NM_004259|RECQL5|9400|RecQ protein-like 5##BC062771|C17orf110|100130933|chromosome 17 open reading frame 110##NM_001162997|C17orf110|100130933|chromosome 17 open reading frame 110##AK131023|C17orf110|100130933|chromosome 17 open reading frame 110##NM_000213|ITGB4|3691|integrin, beta 4##NM_001005731|ITGB4|3691|integrin, beta 4##X53587|ITGB4|3691|integrin, beta 4##X51841|ITGB4|3691|integrin, beta 4##BC126411|ITGB4|3691|integrin, beta 4##BC143738|ITGB4|3691|integrin, beta 4##BC143742|ITGB4|3691|integrin, beta 4##AK304792|ITGB4|3691|integrin, beta 4##AK310952|ITGB4|3691|integrin, beta 4##BC118916|ITGB4|3691|integrin, beta 4##AB208913|ITGB4|3691|integrin, beta 4	0.0	
chr21	26829814	26829994	reg1033571.p2	4.430	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-1028836	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-4459131	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-4459214	+	TSC_hg19_v1_chr21_+_26934442 AF402776	104568	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	149911	-	NM_021219 TSC_hg19_v1_chr21_+_27011719	181749	+	AK124194|FLJ42200|400860|FLJ42200 protein##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##NM_021219|JAM2|58494|junctional adhesion molecule 2	0.0	
chr2	163157811	163157966	reg1035103.p2	4.430	+	BC026250 AF007822 U76833 AK315448 AK309260 AK297118 NM_004460 U09278	-57928	-	NM_002054	-148975	-	BC065265 NM_001935 TSC_hg19_v1_chr2_-_162931062	-226832	-	CU692330 BC111750 AY017378 AF095844 NM_022168 BC078180 TSC_hg19_v1_chr2_-_163175195 BC046208 AK292941 AK314611	17195	-	NM_012198 TSC_hg19_v1_chr2_+_163200610	42710	+	TSC_hg19_v1_chr2_+_163200633 AK312349 M81637 BC005214 AB209768 AB529141 CU675051 AK295413	42873	+	BC026250|FAP|2191|fibroblast activation protein, alpha##AF007822|FAP|2191|fibroblast activation protein, alpha##U76833|FAP|2191|fibroblast activation protein, alpha##AK315448|FAP|2191|fibroblast activation protein, alpha##AK309260|FAP|2191|fibroblast activation protein, alpha##AK297118|FAP|2191|fibroblast activation protein, alpha##NM_004460|FAP|2191|fibroblast activation protein, alpha##U09278|FAP|2191|fibroblast activation protein, alpha##NM_002054|GCG|2641|glucagon##BC065265|DPP4|1803|dipeptidyl-peptidase 4##NM_001935|DPP4|1803|dipeptidyl-peptidase 4##BC111750|IFIH1|64135|interferon induced with helicase C domain 1##AY017378|IFIH1|64135|interferon induced with helicase C domain 1##AF095844|IFIH1|64135|interferon induced with helicase C domain 1##NM_022168|IFIH1|64135|interferon induced with helicase C domain 1##BC078180|IFIH1|64135|interferon induced with helicase C domain 1##BC046208|IFIH1|64135|interferon induced with helicase C domain 1##AK292941|IFIH1|64135|interferon induced with helicase C domain 1##AK314611|IFIH1|64135|interferon induced with helicase C domain 1##NM_012198|GCA|25801|grancalcin, EF-hand calcium binding protein##AK312349|GCA|25801|grancalcin, EF-hand calcium binding protein##M81637|GCA|25801|grancalcin, EF-hand calcium binding protein##BC005214|GCA|25801|grancalcin, EF-hand calcium binding protein##AB209768|GCA|25801|grancalcin, EF-hand calcium binding protein##AK295413|GCA|25801|grancalcin, EF-hand calcium binding protein	0.998775	CTCF.p2:0:0.999
chr22	20305215	20305319	reg1029795.p1	4.430	+	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	-49500	-	NM_001243537	-167837	-	TSC_hg19_v1_chr22_+_20119357 AY894890 BC053544 NM_001185024 NM_013373 AK131238	-185834	+	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	2302	-	NM_001242313	72401	+	BC072398 TSC_hg19_v1_chr22_-_20427830	122563	-	AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##NM_001243537|LOC388849|388849|uncharacterized LOC388849##AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8##BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8##AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_001242313|TMEM191B|728229|transmembrane protein 191B##BC072398|PI4KAP1|728233|phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1	0.98634	CTCF.p2:21:0.986
chr3	195842721	195842901	reg1029828.p2	4.430	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-33795	-	TSC_hg19_v1_chr3_-_195808984 M11507	-33828	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-33850	-	BC034801 BC022078 NM_001039617 AK122907	95470	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	100583	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	171724	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr8	8345181	8345291	reg1030826.p2	4.430	+	AK122582 NM_001080826	-106014	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-169348	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-259094	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	214462	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	405702	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	515129	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.016214	
chr11	32253584	32253728	reg1034034.p2	4.429	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	-140957	+	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	-141179	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-414178	-	AK093168 BC032861 NM_001198551 NM_001198552	198704	-	TSC_hg19_v1_chr11_-_32456950 BC046461	203283	-	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	203413	-	BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1##BC046461|WT1|7490|Wilms tumor 1##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1	0.045758	
chr13	50226970	50227068	reg1029129.p1	4.429	+	AF441378 NM_138450	-24585	+	TSC_hg19_v1_chr13_-_50159706 BC038104 AK096654 NM_018191	-67295	-	AL833821 TSC_hg19_v1_chr13_-_50159688 AJ319660 AF334406	-67354	-	TSC_hg19_v1_chr13_-_50265590 DQ891521 DQ894711 BC018478	38502	-	TSC_hg19_v1_chr13_-_50265611 BC021021 AF243433 BC092471 BC073152 NM_032565	38610	-	TSC_hg19_v1_chr13_-_50366675 AF034756 DQ892644 DQ895882 AB528414 AF005263 Y12394 BC017355 BC024202 AK291000 AK223480	139598	-	AF441378|ARL11|115761|ADP-ribosylation factor-like 11##NM_138450|ARL11|115761|ADP-ribosylation factor-like 11##BC038104|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AK096654|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##NM_018191|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AL833821|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AJ319660|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AF334406|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##DQ891521|EBPL|84650|emopamil binding protein-like##DQ894711|EBPL|84650|emopamil binding protein-like##BC018478|EBPL|84650|emopamil binding protein-like##BC021021|EBPL|84650|emopamil binding protein-like##AF243433|EBPL|84650|emopamil binding protein-like##BC092471|EBPL|84650|emopamil binding protein-like##BC073152|EBPL|84650|emopamil binding protein-like##NM_032565|EBPL|84650|emopamil binding protein-like##AF034756|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##DQ892644|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##DQ895882|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AF005263|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##Y12394|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC017355|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC024202|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK291000|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK223480|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)	0.982804	CTCF.p2:7:0.983
chr19	17294101	17294191	reg1028672.p1	4.429	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-107553	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-107825	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-156606	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	32026	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	32059	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	42888	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.927507	CTCF.p2:-13:0.863
chr2	217552516	217552622	reg1031007.p1	4.429	+	L27560 AF147308 TSC_hg19_v1_chr2_-_217540846	-11785	-	TSC_hg19_v1_chr2_+_217498216 DQ893450 EU176752	-54271	+	TSC_hg19_v1_chr2_+_217498142 NM_000597 X16302 BC071967 AB209509 BC004312 BC009902 BC012769 M35410	-54433	+	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	6997	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	7691	-	BC029516 NM_003284	172212	-	L27560|IGFBP5|3488|insulin-like growth factor binding protein 5##AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5##DQ893450|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##EU176752|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)	0.999477	CTCF.p2:-2:0.999
chr2	239628897	239628999	reg1031469.p2	4.429	+	TSC_hg19_v1_chr2_+_239335693 AF156777	-293259	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	-293342	+	TSC_hg19_v1_chr2_+_239229215 AB590948 CU691344 AF230877	-399690	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	127815	+	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	693700	-	TSC_hg19_v1_chr2_-_240322695 BC039904	693750	-	AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AF230877|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4	0.996369	CTCF.p2:20:0.996
chr2	3183173	3183298	reg1032905.p2	4.429	+	TSC_hg19_v1_chr2_-_2335085 AK307797	-848151	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	-848270	-	BC031690 TSC_hg19_v1_chr2_-_1946938	-1236329	-	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	198321	-	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	200270	+	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	340063	-	AK307797|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1	0.634512	CTCF.p2:-7:0.635
chr2	99001434	99001606	reg1001261.p1	4.429	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-38615	+	DQ426863 NM_001079878 NM_001298 DQ067460	-38887	+	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	-297874	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	59838	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	223422	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	223530	+	DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B##AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)	0.0	
chr5	157170432	157170603	reg1005039.p1	4.429	+	AY463216 NM_017872 TSC_hg19_v1_chr5_+_157158427 AK000553 AK223119 AK304590 BC023521 AL136669 AK021663 AB528251 AM392629 CR533503 BC001523 BC001852 CU674750	-12089	+	NM_001145132	-71957	+	BC035142 AK055284 TSC_hg19_v1_chr5_-_157098473 AK302162	-72052	-	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	223	+	AK055297 TSC_hg19_v1_chr5_+_157184422	13863	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	115573	-	AY463216|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##NM_017872|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK000553|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK223119|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK304590|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC023521|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AL136669|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##AK021663|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##CR533503|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001523|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##BC001852|THG1L|54974|tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)##NM_001145132|C5orf52|100190949|chromosome 5 open reading frame 52##AK302162|SOX30|11063|SRY (sex determining region Y)-box 30##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1	0.0	
chr5	67742438	67742618	reg1030069.p1	4.429	+	AK094785 NM_001242466 AK294919	-154076	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-155982	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-158234	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	647275	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	647354	+	AK292925 TSC_hg19_v1_chr5_+_68389913	647385	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.0	
chr9	6907899	6908029	reg1030759.p1	4.429	+	TSC_hg19_v1_chr9_+_6757984 AB018323 AK304095 AK314355 AB037901 BC008296 AK303651 AK304032 BC104859 BC104861 BC143571	-149925	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	-150297	+	AK310439 NM_001146696	-187102	+	AL137489 TSC_hg19_v1_chr9_-_7799779 BC009510 AK308643 AK128876 AK292632 NM_033428	891751	-	TSC_hg19_v1_chr9_+_8713275 AY779046	1805328	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	1825955	-	AB018323|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304095|KDM4C|23081|lysine (K)-specific demethylase 4C##AK314355|KDM4C|23081|lysine (K)-specific demethylase 4C##AB037901|KDM4C|23081|lysine (K)-specific demethylase 4C##BC008296|KDM4C|23081|lysine (K)-specific demethylase 4C##AK303651|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304032|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104859|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104861|KDM4C|23081|lysine (K)-specific demethylase 4C##BC143571|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##AL137489|C9orf123|90871|chromosome 9 open reading frame 123##BC009510|C9orf123|90871|chromosome 9 open reading frame 123##AK292632|C9orf123|90871|chromosome 9 open reading frame 123##NM_033428|C9orf123|90871|chromosome 9 open reading frame 123##AY779046|RPL18A|6142|ribosomal protein L18a##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D	0.858287	CTCF.p2:6:0.858
chr10	5894538	5894652	reg1028854.p2	4.428	+	TSC_hg19_v1_chr10_-_5855394 Y13286 AK297177 AK297554 AK312485 NM_001115156 NM_001494	-39160	-	BX648038 AB451295 AB451429 BT006868 CR457073 D13988 DQ890573 DQ893733 BC005145 TSC_hg19_v1_chr10_-_5855330 AK309360	-39329	-	TSC_hg19_v1_chr10_+_5772610 AB095927	-121923	+	TSC_hg19_v1_chr10_-_5931834 BC067892 NM_001009941 NM_001009943 NM_019046	37261	-	TSC_hg19_v1_chr10_+_5932205 AK095343	37604	+	TSC_hg19_v1_chr10_+_5932214 NM_178150	37616	+	Y13286|GDI2|2665|GDP dissociation inhibitor 2##AK297177|GDI2|2665|GDP dissociation inhibitor 2##AK297554|GDI2|2665|GDP dissociation inhibitor 2##AK312485|GDI2|2665|GDP dissociation inhibitor 2##NM_001115156|GDI2|2665|GDP dissociation inhibitor 2##NM_001494|GDI2|2665|GDP dissociation inhibitor 2##BX648038|GDI2|2665|GDP dissociation inhibitor 2##AB451295|GDI2|2665|GDP dissociation inhibitor 2##AB451429|GDI2|2665|GDP dissociation inhibitor 2##BT006868|GDI2|2665|GDP dissociation inhibitor 2##CR457073|GDI2|2665|GDP dissociation inhibitor 2##D13988|GDI2|2665|GDP dissociation inhibitor 2##DQ890573|GDI2|2665|GDP dissociation inhibitor 2##DQ893733|GDI2|2665|GDP dissociation inhibitor 2##BC005145|GDI2|2665|GDP dissociation inhibitor 2##AK309360|GDI2|2665|GDP dissociation inhibitor 2##AB095927|FAM208B|54906|family with sequence similarity 208, member B##BC067892|ANKRD16|54522|ankyrin repeat domain 16##NM_001009941|ANKRD16|54522|ankyrin repeat domain 16##NM_001009943|ANKRD16|54522|ankyrin repeat domain 16##NM_019046|ANKRD16|54522|ankyrin repeat domain 16##AK095343|FBXO18|84893|F-box protein, helicase, 18##NM_178150|FBXO18|84893|F-box protein, helicase, 18	0.0	
chr13	47557451	47557592	reg1026110.p1	4.428	+	AK314132 BX647777 AK302787 NM_000621 NM_001165947	-86454	-	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	-186206	-	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-430014	+	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1017930	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	1054293	+	TSC_hg19_v1_chr13_-_48612129 AK316271	1054587	-	AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##AK316271|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.0	
chr19	17623078	17623258	reg1031123.p2	4.428	+	TSC_hg19_v1_chr19_+_17622445 BC017706 BC014006 AJ243972 AB463386 DQ893462 DQ896322	-706	+	TSC_hg19_v1_chr19_+_17622443 NM_012088	-737	+	TSC_hg19_v1_chr19_-_17622285 AK125289	-881	-	AY254197 AY254198 AY254199 NM_001098524 NM_173544	10941	+	AK300046 AK097121 TSC_hg19_v1_chr19_+_17638075 AK298062 AK074069 AK301159 BC053606	14920	+	TSC_hg19_v1_chr19_+_17666429 AK074941	43240	+	BC017706|PGLS|25796|6-phosphogluconolactonase##BC014006|PGLS|25796|6-phosphogluconolactonase##AJ243972|PGLS|25796|6-phosphogluconolactonase##DQ893462|PGLS|25796|6-phosphogluconolactonase##DQ896322|PGLS|25796|6-phosphogluconolactonase##NM_012088|PGLS|25796|6-phosphogluconolactonase##AK125289|LOC100507551|100507551|uncharacterized LOC100507551##AY254197|FAM129C|199786|family with sequence similarity 129, member C##AY254198|FAM129C|199786|family with sequence similarity 129, member C##AY254199|FAM129C|199786|family with sequence similarity 129, member C##NM_001098524|FAM129C|199786|family with sequence similarity 129, member C##NM_173544|FAM129C|199786|family with sequence similarity 129, member C##AK300046|FAM129C|199786|family with sequence similarity 129, member C##AK097121|FAM129C|199786|family with sequence similarity 129, member C##AK298062|FAM129C|199786|family with sequence similarity 129, member C##AK074069|FAM129C|199786|family with sequence similarity 129, member C##AK301159|FAM129C|199786|family with sequence similarity 129, member C##BC053606|FAM129C|199786|family with sequence similarity 129, member C##AK074941|GLT25D1|79709|glycosyltransferase 25 domain containing 1	0.0	
chr2	56357711	56357837	reg1035389.p1	4.428	+	AK293058 NM_001039348 NM_001039349	-206489	-	TSC_hg19_v1_chr2_-_56150918 AK301531 BC014410 BC098561 AK301402 AK312639 AK092854 AK290599 AX747769	-206859	-	TSC_hg19_v1_chr2_-_55920980 BC053660 BC009057 AK027437 AY027528 AK307589 AJ458465 NM_033109	-436796	-	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	53431	+	AB384323 TSC_hg19_v1_chr2_+_56411776	53992	+	AK311113 TSC_hg19_v1_chr2_-_56412914	55135	-	AK293058|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039348|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##NM_001039349|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301531|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC014410|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC098561|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK301402|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK312639|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK092854|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##AK290599|EFEMP1|2202|EGF containing fibulin-like extracellular matrix protein 1##BC053660|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##BC009057|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AY027528|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AK307589|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AJ458465|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##NM_033109|PNPT1|87178|polyribonucleotide nucleotidyltransferase 1##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK311113|LOC100129434|100129434|uncharacterized LOC100129434	0.901077	CTCF.p2:10:0.901
chr4	184365192	184365373	reg1026095.p1	4.428	+	NM_001185149	-121704	-	NM_001111319	-123356	-	TSC_hg19_v1_chr4_+_184020431 NM_024949	-344804	+	TSC_hg19_v1_chr4_+_184365788 AK000043 NM_017632	504	+	TSC_hg19_v1_chr4_+_184365846 AF246705 AK096180 BC022270 AK225848 EU446516 CU692522	587	+	TSC_hg19_v1_chr4_-_184425612 BC038563	60356	-	NM_001185149|CLDN24|100132463|claudin 24##NM_001111319|CLDN22|53842|claudin 22##NM_024949|WWC2|80014|WW and C2 domain containing 2##AK000043|CDKN2AIP|55602|CDKN2A interacting protein##NM_017632|CDKN2AIP|55602|CDKN2A interacting protein##AF246705|CDKN2AIP|55602|CDKN2A interacting protein##AK096180|CDKN2AIP|55602|CDKN2A interacting protein##BC022270|CDKN2AIP|55602|CDKN2A interacting protein##AK225848|CDKN2AIP|55602|CDKN2A interacting protein##EU446516|CDKN2AIP|55602|CDKN2A interacting protein##BC038563|LOC389247|389247|uncharacterized LOC389247	0.0	
chrX	148280803	148280973	reg1028684.p2	4.428	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-480276	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-698700	+	BC034320 NM_152578 AY211917 AK098602	-1218033	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	305886	-	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	341542	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	341706	+	AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A	0.665094	CTCF.p2:-86:0.665
chr19	13720871	13721014	reg1032144.p2	4.427	+	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	-103766	-	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-456762	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-459650	+	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	121637	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	137777	+	TSC_hg19_v1_chr19_+_13875323 NM_001031727 NM_032285	154378	+	AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130##NM_001031727|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)##NM_032285|MRI1|84245|methylthioribose-1-phosphate isomerase homolog (S. cerevisiae)	0.0	
chr3	195474918	195475044	reg1033517.p2	4.427	+	NM_001098516	-23884	+	TSC_hg19_v1_chr3_+_195447848 AY358449 AK075138 BC029267 AK027314 BC044243 CU688620 CU692194	-27137	+	TSC_hg19_v1_chr3_+_195447752 NM_152673 AK311504	-27226	+	EF091824 AJ242549 AJ242550 AJ276359 AJ277412 AJ277505 AJ400633 AJ400849 AJ400850 AJ400851 AJ400852 AJ400853 AJ400854 AJ400855 AJ400856 AJ400857 AJ400858 TSC_hg19_v1_chr3_-_195538801 AK307054 NM_004532 NM_018406 NM_138297	63790	-	BC008884 AK225786 BC020389 TSC_hg19_v1_chr3_-_195619679	144584	-	AK131539 NM_001010938	147450	-	NM_001098516|MUC20|200958|mucin 20, cell surface associated##AY358449|MUC20|200958|mucin 20, cell surface associated##AK075138|MUC20|200958|mucin 20, cell surface associated##BC029267|MUC20|200958|mucin 20, cell surface associated##AK027314|MUC20|200958|mucin 20, cell surface associated##BC044243|MUC20|200958|mucin 20, cell surface associated##NM_152673|MUC20|200958|mucin 20, cell surface associated##AK311504|MUC20|200958|mucin 20, cell surface associated##EF091824|MUC4|4585|mucin 4, cell surface associated##AJ242549|MUC4|4585|mucin 4, cell surface associated##AJ242550|MUC4|4585|mucin 4, cell surface associated##AJ276359|MUC4|4585|mucin 4, cell surface associated##AJ277412|MUC4|4585|mucin 4, cell surface associated##AJ277505|MUC4|4585|mucin 4, cell surface associated##AJ400633|MUC4|4585|mucin 4, cell surface associated##AJ400849|MUC4|4585|mucin 4, cell surface associated##AJ400850|MUC4|4585|mucin 4, cell surface associated##AJ400851|MUC4|4585|mucin 4, cell surface associated##AJ400852|MUC4|4585|mucin 4, cell surface associated##AJ400853|MUC4|4585|mucin 4, cell surface associated##AJ400854|MUC4|4585|mucin 4, cell surface associated##AJ400855|MUC4|4585|mucin 4, cell surface associated##AJ400856|MUC4|4585|mucin 4, cell surface associated##AJ400857|MUC4|4585|mucin 4, cell surface associated##AJ400858|MUC4|4585|mucin 4, cell surface associated##AK307054|MUC4|4585|mucin 4, cell surface associated##NM_004532|MUC4|4585|mucin 4, cell surface associated##NM_018406|MUC4|4585|mucin 4, cell surface associated##NM_138297|MUC4|4585|mucin 4, cell surface associated##BC008884|TNK2|10188|tyrosine kinase, non-receptor, 2##AK225786|TNK2|10188|tyrosine kinase, non-receptor, 2##BC020389|TNK2|10188|tyrosine kinase, non-receptor, 2##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2	0.0	
chr8	135348668	135348789	reg1030125.p2	4.427	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-764631	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-1039231	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1145398	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	360066	-	TSC_hg19_v1_chr8_-_135725053 AB463359	376351	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	376546	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.983568	CTCF.p2:9:0.984
chr9	136858772	136858855	reg1000028.p3	4.427	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	-1367	-	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-253827	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-255335	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	74380	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	74813	-	NM_017588 TSC_hg19_v1_chr9_+_137001212	142397	+	BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3##NM_017588|WDR5|11091|WD repeat domain 5	0.0	
chrX	114963709	114963890	reg1006940.p2	4.427	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-135931	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-166757	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-168193	+	BC003645 TSC_hg19_v1_chrX_-_115085443	121640	-	AK313927 NM_000686 X87723 U16957	338196	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	603968	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr1	16767676	16767748	reg1006307.p2	4.426	+	TSC_hg19_v1_chr1_+_16767236 BC017014 AK001282 AB463921 AK024468 AM393342	-467	+	AK223344 TSC_hg19_v1_chr1_+_16767218 AK300764 AK302227 AK023545 BC018914	-487	+	NM_001145277 NM_001145278 NM_018090 TSC_hg19_v1_chr1_+_16767200	-528	+	BC028053 TSC_hg19_v1_chr1_-_16825680	57939	-	TSC_hg19_v1_chr1_-_16940046 AK123260 AY894575 NM_017940 BC066930 BC010124 BC082236 BC110431 AK055895 BC093404	172184	-	TSC_hg19_v1_chr1_-_16971175 AK090414	203454	-	BC017014|NECAP2|55707|NECAP endocytosis associated 2##AK001282|NECAP2|55707|NECAP endocytosis associated 2##AK024468|NECAP2|55707|NECAP endocytosis associated 2##AM393342|NECAP2|55707|NECAP endocytosis associated 2##AK223344|NECAP2|55707|NECAP endocytosis associated 2##AK300764|NECAP2|55707|NECAP endocytosis associated 2##AK302227|NECAP2|55707|NECAP endocytosis associated 2##AK023545|NECAP2|55707|NECAP endocytosis associated 2##BC018914|NECAP2|55707|NECAP endocytosis associated 2##NM_001145277|NECAP2|55707|NECAP endocytosis associated 2##NM_001145278|NECAP2|55707|NECAP endocytosis associated 2##NM_018090|NECAP2|55707|NECAP endocytosis associated 2##AK123260|NBPF1|55672|neuroblastoma breakpoint family, member 1##AY894575|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_017940|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC066930|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC010124|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC110431|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK055895|NBPF1|55672|neuroblastoma breakpoint family, member 1##BC093404|NBPF1|55672|neuroblastoma breakpoint family, member 1##AK090414|CROCCP2|84809|ciliary rootlet coiled-coil, rootletin pseudogene 2	0.0	
chr15	96898399	96898495	reg1028941.p2	4.426	+	NM_001145157	-21879	+	AK316086 NM_001145156	-22654	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	-24470	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	428225	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	1605472	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	1605504	+	NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4	0.032802	
chr18	43999401	43999468	reg1039244.p2	4.426	+	AK091537 AK122819 AK127467 AX747044 NM_152470	-85248	+	TSC_hg19_v1_chr18_+_43913942 AK055997	-85502	+	TSC_hg19_v1_chr18_+_43754065 AK289738	-245352	+	AK057232 BC047720 NM_001145473 NM_001173129	99606	-	BC041860 AK302484 NM_001145472	139826	-	NM_144612	237561	-	AK091537|RNF165-IT1|147341|RNF165 intronic transcript 1 (non-protein coding)##AK122819|RNF165|494470|ring finger protein 165##AK127467|RNF165|494470|ring finger protein 165##NM_152470|RNF165|494470|ring finger protein 165##AK055997|RNF165|494470|ring finger protein 165##AK289738|C18orf25|147339|chromosome 18 open reading frame 25##AK057232|LOXHD1|125336|lipoxygenase homology domains 1##BC047720|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145473|LOXHD1|125336|lipoxygenase homology domains 1##NM_001173129|LOXHD1|125336|lipoxygenase homology domains 1##BC041860|LOXHD1|125336|lipoxygenase homology domains 1##AK302484|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145472|LOXHD1|125336|lipoxygenase homology domains 1##NM_144612|LOXHD1|125336|lipoxygenase homology domains 1	0.0	
chr19	29751546	29751677	reg1032315.p2	4.426	+	TSC_hg19_v1_chr19_-_29704107 NM_006003	-47490	-	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	-47551	-	TSC_hg19_v1_chr19_+_28284946 AK095009	-1466683	+	NM_001146339	265879	+	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	345578	+	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	404738	+	NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B##NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1	0.578899	CTCF.p2:-15:0.579
chr2	208102219	208102361	reg1033820.p1	4.426	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-70665	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-71634	-	BC112076 BC112078 NM_173077 AJ422118	-297990	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	292353	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	292431	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	292491	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.0	
chr2	62533172	62533328	reg1030419.p2	4.426	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-109984	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-400421	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-417464	-	BC047439 AK091902 AX747245 NM_198276	200289	-	AK292545 NM_001142615	367735	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	399716	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr4	187058514	187058663	reg1010171.p1	4.426	+	BC017954 NM_003265 AK314208 BC068487 BC094737 TSC_hg19_v1_chr4_+_186990309 BC059372 BC096333 BC096334 BC096335 DQ445682 U88879	-68259	+	NM_021069	-180719	-	AK295742 AK056628 BC035329 AB018320 TSC_hg19_v1_chr4_-_186877527	-181116	-	NM_015398 TSC_hg19_v1_chr4_+_187065998 BC142992 BC110816	7457	+	NM_001006655 AF173894	11770	+	TSC_hg19_v1_chr4_+_187112641 AY422002 NM_207352	54072	+	BC017954|TLR3|7098|toll-like receptor 3##NM_003265|TLR3|7098|toll-like receptor 3##AK314208|TLR3|7098|toll-like receptor 3##BC068487|TLR3|7098|toll-like receptor 3##BC094737|TLR3|7098|toll-like receptor 3##BC059372|TLR3|7098|toll-like receptor 3##BC096333|TLR3|7098|toll-like receptor 3##BC096334|TLR3|7098|toll-like receptor 3##BC096335|TLR3|7098|toll-like receptor 3##DQ445682|TLR3|7098|toll-like receptor 3##U88879|TLR3|7098|toll-like receptor 3##NM_021069|SORBS2|8470|sorbin and SH3 domain containing 2##AK295742|SORBS2|8470|sorbin and SH3 domain containing 2##AK056628|SORBS2|8470|sorbin and SH3 domain containing 2##BC035329|SORBS2|8470|sorbin and SH3 domain containing 2##AB018320|SORBS2|8470|sorbin and SH3 domain containing 2##NM_015398|FAM149A|25854|family with sequence similarity 149, member A##BC142992|FAM149A|25854|family with sequence similarity 149, member A##BC110816|FAM149A|25854|family with sequence similarity 149, member A##NM_001006655|FAM149A|25854|family with sequence similarity 149, member A##AF173894|FAM149A|25854|family with sequence similarity 149, member A##AY422002|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2##NM_207352|CYP4V2|285440|cytochrome P450, family 4, subfamily V, polypeptide 2	0.571026	CTCF.p2:31:0.571
chr5	53455143	53455246	reg1032902.p2	4.426	+	TSC_hg19_v1_chr5_+_52856474 AF020351 AK307973 CU675075	-598708	+	TSC_hg19_v1_chr5_+_52856468 NM_002495 BC005270	-598730	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	-678644	+	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	151131	-	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	151208	-	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	296330	+	AF020351|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK307973|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##NM_002495|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##BC005270|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3	0.334239	CTCF.p2:-4:0.334
chr1	160854548	160854670	reg1026263.p1	4.425	+	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	-22031	-	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	-88611	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-145545	+	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	349	-	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	69950	-	BT020103 CR533512 DQ892228 DQ895428 EU831648 EU831732 AB528601 AF207907 AK304412 TSC_hg19_v1_chr1_-_160990931 BC001533 AY358896 AK026665 AF154005 AK075152 AL136649	136289	-	AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2##BT020103|F11R|50848|F11 receptor##CR533512|F11R|50848|F11 receptor##DQ892228|F11R|50848|F11 receptor##DQ895428|F11R|50848|F11 receptor##EU831648|F11R|50848|F11 receptor##EU831732|F11R|50848|F11 receptor##AF207907|F11R|50848|F11 receptor##AK304412|F11R|50848|F11 receptor##BC001533|F11R|50848|F11 receptor##AY358896|F11R|50848|F11 receptor##AK026665|F11R|50848|F11 receptor##AF154005|F11R|50848|F11 receptor##AK075152|F11R|50848|F11 receptor##AL136649|F11R|50848|F11 receptor	0.157661	
chr15	21995344	21995471	reg1005873.p1	4.425	+	NM_207355 BC066981	-923429	-	NM_001145004	-1248294	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-1283970	-	NM_207355 BC066981	87731	-	BC136985 NM_001004719	373070	+	BC136597 BC136598 NM_001005241 DQ786223	387038	+	NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4	0.212698	CTCF.p2:-14:0.213
chr17	1496286	1496431	reg1027837.p2	4.425	+	BC082976 TSC_hg19_v1_chr17_-_1466077 BC027177 D30036 M73704 BC045108 BC068538 NM_006224	-30276	-	TSC_hg19_v1_chr17_-_1420177 AK312844 NM_001135642 NM_016532 NM_130766	-76179	-	TSC_hg19_v1_chr17_-_1419907 DQ892815 DQ896061 AB529166 AK297955 AK303907 AK307293 AB036829 AB036830 AK312585 BC004362	-76392	-	AF289592 TSC_hg19_v1_chr17_-_1531711 AB120364	35282	-	TSC_hg19_v1_chr17_-_1532115 BC027923 NM_152346 BC071859	35786	-	D63483 AK310174 AB052950 AB052949 AB052947 D86864 TSC_hg19_v1_chr17_-_1549050 AK291810 AB052948 BC039735 NM_003693 NM_145350 NM_145352 AK298737	52679	-	BC082976|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC027177|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D30036|PITPNA|5306|phosphatidylinositol transfer protein, alpha##M73704|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC045108|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC068538|PITPNA|5306|phosphatidylinositol transfer protein, alpha##NM_006224|PITPNA|5306|phosphatidylinositol transfer protein, alpha##AK312844|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_001135642|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_016532|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_130766|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ892815|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ896061|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK297955|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK303907|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK307293|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036829|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036830|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312585|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC004362|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AF289592|SLC43A2|124935|solute carrier family 43, member 2##AB120364|SLC43A2|124935|solute carrier family 43, member 2##BC027923|SLC43A2|124935|solute carrier family 43, member 2##NM_152346|SLC43A2|124935|solute carrier family 43, member 2##BC071859|SLC43A2|124935|solute carrier family 43, member 2##D63483|SCARF1|8578|scavenger receptor class F, member 1##AK310174|SCARF1|8578|scavenger receptor class F, member 1##AB052950|SCARF1|8578|scavenger receptor class F, member 1##AB052949|SCARF1|8578|scavenger receptor class F, member 1##AB052947|SCARF1|8578|scavenger receptor class F, member 1##D86864|SCARF1|8578|scavenger receptor class F, member 1##AK291810|SCARF1|8578|scavenger receptor class F, member 1##AB052948|SCARF1|8578|scavenger receptor class F, member 1##BC039735|SCARF1|8578|scavenger receptor class F, member 1##NM_003693|SCARF1|8578|scavenger receptor class F, member 1##NM_145350|SCARF1|8578|scavenger receptor class F, member 1##NM_145352|SCARF1|8578|scavenger receptor class F, member 1##AK298737|SCARF1|8578|scavenger receptor class F, member 1	0.022415	
chr18	51884054	51884201	reg1024276.p1	4.425	+	AB528241 AF480305 NM_139171	-3185	-	NM_007195 TSC_hg19_v1_chr18_+_51795943 AK301578 AF140501 BC032617 BC032662 AL136670 AF245438 AK093688 AB463184 AM392978 DQ890893 DQ896811 CU689468	-88187	+	TSC_hg19_v1_chr18_-_51751035 AF072242 NM_003927 NM_015832	-133050	-	BX640877 NM_173529	1043	+	AK096425 NM_173629	374262	+	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	611611	+	AF480305|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_139171|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_007195|POLI|11201|polymerase (DNA directed) iota##AK301578|POLI|11201|polymerase (DNA directed) iota##AF140501|POLI|11201|polymerase (DNA directed) iota##BC032617|POLI|11201|polymerase (DNA directed) iota##BC032662|POLI|11201|polymerase (DNA directed) iota##AL136670|POLI|11201|polymerase (DNA directed) iota##AF245438|POLI|11201|polymerase (DNA directed) iota##AK093688|POLI|11201|polymerase (DNA directed) iota##AM392978|POLI|11201|polymerase (DNA directed) iota##DQ890893|POLI|11201|polymerase (DNA directed) iota##DQ896811|POLI|11201|polymerase (DNA directed) iota##AF072242|MBD2|8932|methyl-CpG binding domain protein 2##NM_003927|MBD2|8932|methyl-CpG binding domain protein 2##NM_015832|MBD2|8932|methyl-CpG binding domain protein 2##BX640877|C18orf54|162681|chromosome 18 open reading frame 54##NM_173529|C18orf54|162681|chromosome 18 open reading frame 54##AK096425|C18orf26|284254|chromosome 18 open reading frame 26##NM_173629|C18orf26|284254|chromosome 18 open reading frame 26##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family	0.820047	CTCF.p2:43:0.820
chr10	61641041	61641222	reg1023221.p3	4.424	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-171407	-	AK299924 NM_001143773	-518471	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-518846	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	25070	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	25193	-	AK292927 AK092527 NM_001149	259585	-	AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.0	
chr1	107518721	107518867	reg1038634.p1	4.424	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-3226292	+	NM_001008221 AK292341	-3226516	+	AK292341 NM_001008221	-3279723	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	80571	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	163948	+	AB023193 TSC_hg19_v1_chr1_+_107683657	164810	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.211004	CTCF.p2:-3:0.211
chr16	11326946	11327040	reg1027960.p1	4.424	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-288550	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-290758	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-290827	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	23057	-	X63758 BC096135 BC096136 BC096137 NM_005425	36145	-	NM_021247	40458	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr18	20820313	20820413	reg1027911.p2	4.424	+	BC037218 NM_138375	-84575	+	EF028204 NM_001100619	-104637	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-306548	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	197508	-	AK057292 NM_003831	212423	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	212883	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.0	
chr19	2162509	2162576	reg1036534.p1	4.424	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-10989	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	-11000	-	CU679595 AB384738 BC005142 TSC_hg19_v1_chr19_-_2151519	-11117	-	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	1596	+	BC021037 TSC_hg19_v1_chr19_+_2222534	59932	+	BC032803 TSC_hg19_v1_chr19_+_2232168	69579	+	NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC005142|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	0.0	
chr2	135033052	135033233	reg1031487.p2	4.424	+	NM_002410 D17716 AF113921	-21257	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-707104	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-853788	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	443414	-	AK125008 NM_138326 BC016018 BC107420 AB071418	563076	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	643255	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.0	
chr2	142271593	142271724	reg1031444.p2	4.424	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-2733852	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-3012168	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-3012265	+	TSC_hg19_v1_chr2_-_142888540 AK054663	616898	-	AF176832 NM_018557	617611	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	1363548	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.973136	CTCF.p2:0:0.973
chr6	347200	347381	reg1017747.p1	4.424	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-54793	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-55205	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	44474	+	AF508547 BC101697 BC101699 NM_148959	309663	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	345800	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chr10	89840116	89840270	reg1031447.p1	4.423	+	TSC_hg19_v1_chr10_+_89623420 U96180	-216766	+	TSC_hg19_v1_chr10_+_89623380 BC005821	-216804	+	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	-216967	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	502821	-	BC042900 BC031219 NM_001010939	506320	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	583987	+	U96180|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric	0.0	
chr12	4463055	4463174	reg1024244.p1	4.423	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	-32723	+	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	-80070	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-480614	-	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	25686	-	BC121097 BC121098 NM_020996 X63454	91665	-	TSC_hg19_v1_chr12_-_4647633 AJ272205 BC016908	184505	-	NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23##BC121097|FGF6|2251|fibroblast growth factor 6##BC121098|FGF6|2251|fibroblast growth factor 6##NM_020996|FGF6|2251|fibroblast growth factor 6##X63454|FGF6|2251|fibroblast growth factor 6##AJ272205|C12orf4|57102|chromosome 12 open reading frame 4##BC016908|C12orf4|57102|chromosome 12 open reading frame 4	0.999531	CTCF.p2:0:1.000
chr16	21831777	21831939	reg1032306.p1	4.423	+	BC009198 BC068999 TSC_hg19_v1_chr16_-_21831777 BC070157	-98	-	AK093062 AX747895 NM_170664 BC040551 AK302733	-115541	+	AK125840 NM_001161683	-136109	+	AK316459 AK296301 AK303500 AK301703 AK294452 TSC_hg19_v1_chr16_-_21854901	22970	-	NM_003366 AK307535 TSC_hg19_v1_chr16_+_21964618	132770	+	TSC_hg19_v1_chr16_+_21964679 J04973 BC003136	132827	+	BC009198|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC068999|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC070157|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##AK093062|OTOA|146183|otoancorin##NM_170664|OTOA|146183|otoancorin##BC040551|OTOA|146183|otoancorin##AK302733|OTOA|146183|otoancorin##AK125840|OTOA|146183|otoancorin##NM_001161683|OTOA|146183|otoancorin##AK316459|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296301|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AK303500|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK301703|LOC613037|613037|nuclear pore complex interacting protein pseudogene##AK294452|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_003366|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##AK307535|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##J04973|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##BC003136|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II	0.0	
chr2	122113895	122114008	reg1012857.p2	4.423	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	-71178	-	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	-559058	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-1010154	+	TSC_hg19_v1_chr2_-_122159142 CR749627	45204	-	AK297259 TSC_hg19_v1_chr2_-_122247924	133968	-	TSC_hg19_v1_chr2_-_122407024 BC112940 AK091140 AX746802 BC132723 BC144107 AK299331 AJ288057 NM_001142273 NM_001142274 NM_001207051 NM_015282	293071	-	AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1##AK297259|CLASP1|23332|cytoplasmic linker associated protein 1##BC112940|CLASP1|23332|cytoplasmic linker associated protein 1##AK091140|CLASP1|23332|cytoplasmic linker associated protein 1##BC132723|CLASP1|23332|cytoplasmic linker associated protein 1##BC144107|CLASP1|23332|cytoplasmic linker associated protein 1##AK299331|CLASP1|23332|cytoplasmic linker associated protein 1##AJ288057|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142273|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142274|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001207051|CLASP1|23332|cytoplasmic linker associated protein 1##NM_015282|CLASP1|23332|cytoplasmic linker associated protein 1	0.0	
chr3	189285927	189286033	reg1028866.p1	4.423	+	AK125682 NM_198485 BC101550 BC101552	-396169	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-621010	+	NM_001167671 BC130584 BC144076	-1342746	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	63279	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	221538	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	552715	-	AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1	0.0	
chr4	163471619	163471711	reg1027543.p1	4.423	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	-386514	-	AK294459 NM_014247	-3282668	+	AK058100 NM_152543	-3515333	-	TSC_hg19_v1_chr4_-_164088002 AK097352	616327	-	TSC_hg19_v1_chr4_-_164088043 AK308601	616372	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	616413	-	AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.0	
chr5	17218557	17218636	reg1024471.p1	4.423	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-756	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-984	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-282211	-	AK295087 BC031051 NM_001167667 NM_004934	2769726	-	TSC_hg19_v1_chr5_+_21459621 AK290693	4241013	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	4241052	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.0	
chr5	36090308	36090402	reg1036131.p1	4.423	+	AY358416 BC103924 BC103925 TSC_hg19_v1_chr5_-_36066985 AK075383 AK300751 AK303154 NM_001168316 NM_174914	-23366	-	BC035012 NM_001171873	-89228	-	CU686633 BC068446 AK308046 AK290809 AK057066 AK303770 AK315851 AK296136 NM_152404	-98917	-	BC110506 BC110507 AK091295 AX746900 AK307575 TSC_hg19_v1_chr5_-_36151990 BX647340 AK300433 CR749399 NM_001007527	61648	-	TSC_hg19_v1_chr5_+_36152212 NM_001243120 NM_005983 NM_032637 AK295152 U33761 AK291255	61825	+	BC007441 TSC_hg19_v1_chr5_+_36152241 BC001441 AK296223 AY029177	61912	+	AY358416|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##BC103924|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##BC103925|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##AK075383|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##AK300751|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##AK303154|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##NM_001168316|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##NM_174914|UGT3A2|167127|UDP glycosyltransferase 3 family, polypeptide A2##BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##BC068446|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK308046|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK290809|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK057066|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK303770|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK315851|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK296136|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_152404|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##BC110506|LMBRD2|92255|LMBR1 domain containing 2##BC110507|LMBRD2|92255|LMBR1 domain containing 2##AK091295|LMBRD2|92255|LMBR1 domain containing 2##AK307575|LMBRD2|92255|LMBR1 domain containing 2##BX647340|LMBRD2|92255|LMBR1 domain containing 2##AK300433|LMBRD2|92255|LMBR1 domain containing 2##CR749399|LMBRD2|92255|LMBR1 domain containing 2##NM_001007527|LMBRD2|92255|LMBR1 domain containing 2##NM_001243120|SKP2|6502|S-phase kinase-associated protein 2 (p45)##NM_005983|SKP2|6502|S-phase kinase-associated protein 2 (p45)##NM_032637|SKP2|6502|S-phase kinase-associated protein 2 (p45)##AK295152|SKP2|6502|S-phase kinase-associated protein 2 (p45)##U33761|SKP2|6502|S-phase kinase-associated protein 2 (p45)##AK291255|SKP2|6502|S-phase kinase-associated protein 2 (p45)##BC007441|SKP2|6502|S-phase kinase-associated protein 2 (p45)##BC001441|SKP2|6502|S-phase kinase-associated protein 2 (p45)##AK296223|SKP2|6502|S-phase kinase-associated protein 2 (p45)##AY029177|SKP2|6502|S-phase kinase-associated protein 2 (p45)	0.976773	CTCF.p2:-2:0.977
chr5	96318875	96318980	reg1026725.p1	4.423	+	U62769 NM_175920	-24773	+	TSC_hg19_v1_chr5_+_96271783 U62768 AK314226 BC111718 BC113117 BC028692	-47133	+	NM_005575 D50810	-47561	+	BC036467 TSC_hg19_v1_chr5_-_96478440	159515	-	AK307885 TSC_hg19_v1_chr5_-_96478482	159548	-	AK291034 TSC_hg19_v1_chr5_-_96478504 NM_153234 AK098400	159611	-	U62769|LNPEP|4012|leucyl/cystinyl aminopeptidase##NM_175920|LNPEP|4012|leucyl/cystinyl aminopeptidase##U62768|LNPEP|4012|leucyl/cystinyl aminopeptidase##AK314226|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC111718|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC113117|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC028692|LNPEP|4012|leucyl/cystinyl aminopeptidase##NM_005575|LNPEP|4012|leucyl/cystinyl aminopeptidase##D50810|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC036467|LIX1|167410|Lix1 homolog (chicken)##AK307885|LIX1|167410|Lix1 homolog (chicken)##AK291034|LIX1|167410|Lix1 homolog (chicken)##NM_153234|LIX1|167410|Lix1 homolog (chicken)##AK098400|LIX1|167410|Lix1 homolog (chicken)	0.025594	
chr6	116293994	116294118	reg1033055.p1	4.423	+	AF503292 NM_153612 BC093911 BC093913	-1910032	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-2001720	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	-2001784	-	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	87826	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	127953	+	AK097758 TSC_hg19_v1_chr6_-_116422450	128374	-	AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	0.909953	CTCF.p2:-38:0.910
chr6	164076431	164076559	reg1030776.p1	4.423	+	AL050218 TSC_hg19_v1_chr6_+_163984651	-91882	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	-240263	+	TSC_hg19_v1_chr6_+_163835795 AF272349	-240705	+	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	1646597	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	1999201	-	AY203946 TSC_hg19_v1_chr6_-_166076051	1999557	-	AL050218|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##AY203946|LOC100132188|100132188|LP7097	0.036516	
chr7	32530557	32530666	reg1026022.p2	4.423	+	TSC_hg19_v1_chr7_-_32529998 AJ238097 AF182291 CU675199 AB463843 BC005938 AK022772 AK024217 NM_012322	-614	-	NM_001191058	-192229	-	AK094180 NM_001191059 U40371 NM_005020	-419600	-	NM_001130710 NM_001139499	4258	-	TSC_hg19_v1_chr7_+_32535132 AL833560	4484	+	TSC_hg19_v1_chr7_+_32535168 AK090619 AX746537 NM_015060 BC027724 CU693288	4619	+	AJ238097|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182291|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC005938|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK022772|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK024217|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012322|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001191058|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001130710|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001139499|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AL833560|AVL9|23080|AVL9 homolog (S. cerevisiase)##AK090619|AVL9|23080|AVL9 homolog (S. cerevisiase)##NM_015060|AVL9|23080|AVL9 homolog (S. cerevisiase)##BC027724|AVL9|23080|AVL9 homolog (S. cerevisiase)	0.966293	CTCF.p2:-9:0.966
chr7	75039391	75039503	reg1022376.p1	4.423	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	-14482	+	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	-50877	+	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	-171927	-	AK126486 TSC_hg19_v1_chr7_+_75039644 BC044928 BC103750	207	+	AB354586 TSC_hg19_v1_chr7_-_75072021	32564	-	TSC_hg19_v1_chr7_-_75115568 BC082993 NM_001099415	76122	-	AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC044928|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC103750|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AB354586|POM121C|100101267|POM121 membrane glycoprotein C##BC082993|POM121C|100101267|POM121 membrane glycoprotein C##NM_001099415|POM121C|100101267|POM121 membrane glycoprotein C	0.0	
chr1	207628141	207628243	reg1020104.p2	4.422	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-531	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-133087	+	TSC_hg19_v1_chr1_+_207495084 AB240569 AB240570	-133115	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	41386	+	NM_175710 BC109190 BC109191	190295	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	297201	+	NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240569|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240570|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein	0.0	
chr13	67263282	67263420	reg1033320.p1	4.422	+	AK289924 NM_022843	-5273697	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-5274098	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-6291872	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	541153	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	3419190	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	5176908	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.603878	CTCF.p2:18:0.604
chr14	91817494	91817671	reg1026339.p2	4.422	+	BC098567 NM_003485	-97388	-	BC128536 NM_001177676	-106731	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-236555	+	TSC_hg19_v1_chr14_-_91884159 AF070587	66566	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	66593	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	158918	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.0	
chr2	74408982	74409079	reg1029507.p2	4.422	+	AJ577474 CU678456 TSC_hg19_v1_chr2_-_74406014 AB016839 AK023321 AK001650 BC003398 NM_018221 AK021657	-3123	-	AL122062 TSC_hg19_v1_chr2_-_74382411	-26649	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	-33810	+	AK057260 TSC_hg19_v1_chr2_-_74425749	16685	-	NM_006636 TSC_hg19_v1_chr2_+_74425741 AK300035 AK130664 AK222826 AK223041 AK302245 AK313138 BC015062 BC001548 BC017054 AB529041 X16396 DQ894679	16707	+	AF243499 AF293338 NM_021196	133120	-	AJ577474|MOB1A|55233|MOB kinase activator 1A##AB016839|MOB1A|55233|MOB kinase activator 1A##AK023321|MOB1A|55233|MOB kinase activator 1A##AK001650|MOB1A|55233|MOB kinase activator 1A##BC003398|MOB1A|55233|MOB kinase activator 1A##NM_018221|MOB1A|55233|MOB kinase activator 1A##AK021657|MOB1A|55233|MOB kinase activator 1A##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##NM_006636|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK300035|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK130664|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK222826|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK223041|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK302245|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK313138|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC015062|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC001548|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC017054|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##X16396|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##DQ894679|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AF243499|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##AF293338|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##NM_021196|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5	0.0	
chr4	69770576	69770730	reg1033857.p1	4.422	+	TSC_hg19_v1_chr4_+_69681710 BC113649 AK222839 AK222872 AK292738 AK298432 NM_001075 NM_001144767 X63359	-88935	+	U06641 U08854 AF548389 AK289419 AF180322 BC171879 NM_001076	-234250	-	AF548389 NM_001077 U59209	-336424	-	HQ258456 BC130533 AY358727 AY542891 NM_024743	46840	-	NM_001075 NM_001144767	115459	-	AK313190 TSC_hg19_v1_chr4_+_69962191 BC030974 NM_001074 BC107727 AK223142 J05428 DQ893657 DQ895814	191561	+	BC113649|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK222839|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK222872|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK292738|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK298432|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##NM_001075|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##NM_001144767|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##U06641|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##U08854|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##AF548389|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##AK289419|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##AF180322|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##BC171879|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##NM_001076|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##AF548389|UGT2B15|7366|UDP glucuronosyltransferase 2 family, polypeptide B15##NM_001077|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17##U59209|UGT2B17|7367|UDP glucuronosyltransferase 2 family, polypeptide B17##HQ258456|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##BC130533|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##AY358727|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##AY542891|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##NM_024743|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##NM_001075|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##NM_001144767|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK313190|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##BC030974|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##NM_001074|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##AK223142|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##J05428|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##DQ893657|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##DQ895814|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7	0.126318	
chr8	85560623	85560732	reg1032158.p2	4.422	+	NM_001100391 BC031090	-463573	+	TSC_hg19_v1_chr8_+_85095702 AK095026	-464942	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	-465134	+	AK300234 NM_033402 TSC_hg19_v1_chr8_+_86019350	458670	+	TSC_hg19_v1_chr8_+_86019442 BC030701 BC070092 AK056185 AK300874 AK302648 AK307350 AK307636 AK307443	458792	+	NM_001083588 NM_001951 U31556 TSC_hg19_v1_chr8_+_86089622 Z78409 X86097	528944	+	NM_001100391|RALYL|138046|RALY RNA binding protein-like##BC031090|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK300234|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_033402|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC030701|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC070092|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK056185|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK300874|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK302648|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307350|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307636|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307443|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_001083588|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001951|E2F5|1875|E2F transcription factor 5, p130-binding##U31556|E2F5|1875|E2F transcription factor 5, p130-binding##Z78409|E2F5|1875|E2F transcription factor 5, p130-binding##X86097|E2F5|1875|E2F transcription factor 5, p130-binding	0.765686	CTCF.p2:-3:0.766
chr9	42267386	42267497	reg1034723.p1	4.422	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	-312527	-	BC040528 NM_001113541 NM_015667	-766763	+	BC040528 NM_001113541 NM_015667 NM_001242613	-940062	-	AL136793 NM_001012419 NM_001012421 BC140809 BC171793 AB462947 AM393131 BC146681	100917	+	NM_001099279 NM_199244	449792	+	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	866046	-	BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2	0.666566	CTCF.p2:94:0.486
chr1	187445928	187446070	reg1029268.p1	4.421	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-647911	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-796509	-	M33478 NM_002597	-1015772	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	3000736	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	4681604	+	AY643711 NM_001039152	4840122	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.986977	CTCF.p2:-8:0.987
chr19	2956531	2956652	reg1029313.p1	4.421	+	TSC_hg19_v1_chr19_-_2944927 AK290979 BC043354 BC062561 NM_021217	-11648	-	EF534355 NM_173480 TSC_hg19_v1_chr19_+_2900954 BX537601 BC028974 AK314848	-55656	+	AK021699 AK225297 NM_024967 BC009374	-89249	+	TSC_hg19_v1_chr19_+_2977532 NM_001143986 NM_024760 AK024071 BC013986 BC020206 BC007329 BC068052	20975	+	CU675966 AK308608 M99436 AK312285 BC017364 AK303102 NM_003260 TSC_hg19_v1_chr19_-_3029294	72508	-	AK293407 NM_001144762	73020	-	AK290979|ZNF77|58492|zinc finger protein 77##BC043354|ZNF77|58492|zinc finger protein 77##BC062561|ZNF77|58492|zinc finger protein 77##NM_021217|ZNF77|58492|zinc finger protein 77##EF534355|ZNF57|126295|zinc finger protein 57##NM_173480|ZNF57|126295|zinc finger protein 57##BX537601|ZNF57|126295|zinc finger protein 57##BC028974|ZNF57|126295|zinc finger protein 57##AK314848|ZNF57|126295|zinc finger protein 57##AK021699|ZNF556|80032|zinc finger protein 556##AK225297|ZNF556|80032|zinc finger protein 556##NM_024967|ZNF556|80032|zinc finger protein 556##BC009374|ZNF556|80032|zinc finger protein 556##NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##AK308608|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##M99436|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##AK312285|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##BC017364|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##AK303102|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##NM_003260|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##AK293407|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)##NM_001144762|TLE2|7089|transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila)	0.99956	CTCF.p2:29:1.000
chr19	40925463	40925574	reg1032760.p1	4.421	+	AF321191 AF321192 NM_020956 NM_181882 BC067266	-6247	-	AK302301 AK301713 AK292228 BC034501 NM_144685 AK057380	-29431	-	BC000553 TSC_hg19_v1_chr19_+_40872852	-52735	+	BC002670 AF366402 AF117959 AK222970 AK223011 TSC_hg19_v1_chr19_-_40931900 AK074652 NM_013376	6387	-	AF192529 NM_013368	22986	-	TSC_hg19_v1_chr19_-_40950200 BC014061 AK074604	24693	-	AF321191|PRX|57716|periaxin##AF321192|PRX|57716|periaxin##NM_020956|PRX|57716|periaxin##NM_181882|PRX|57716|periaxin##BC067266|PRX|57716|periaxin##AK302301|HIPK4|147746|homeodomain interacting protein kinase 4##AK301713|HIPK4|147746|homeodomain interacting protein kinase 4##AK292228|HIPK4|147746|homeodomain interacting protein kinase 4##BC034501|HIPK4|147746|homeodomain interacting protein kinase 4##NM_144685|HIPK4|147746|homeodomain interacting protein kinase 4##AK057380|HIPK4|147746|homeodomain interacting protein kinase 4##BC000553|PLD3|23646|phospholipase D family, member 3##BC002670|SERTAD1|29950|SERTA domain containing 1##AF366402|SERTAD1|29950|SERTA domain containing 1##AF117959|SERTAD1|29950|SERTA domain containing 1##AK222970|SERTAD1|29950|SERTA domain containing 1##AK223011|SERTAD1|29950|SERTA domain containing 1##AK074652|SERTAD1|29950|SERTA domain containing 1##NM_013376|SERTAD1|29950|SERTA domain containing 1##AF192529|SERTAD3|29946|SERTA domain containing 3##NM_013368|SERTAD3|29946|SERTA domain containing 3##BC014061|SERTAD3|29946|SERTA domain containing 3##AK074604|SERTAD3|29946|SERTA domain containing 3	0.968682	CTCF.p2:50:0.969
chr19	52014777	52014871	reg1027330.p1	4.421	+	CU690206 AY358140 AF282256 AK225931 BC035809 AK095919 NM_053003 TSC_hg19_v1_chr19_-_52005055	-9795	-	NM_033329	-11178	-	NM_001080405	-34987	+	U71382 BC140798 BC035359 AK300182 AK300170 AK308174 AK309903 D86358 D86359 NM_001177547 NM_001177548 NM_001177549 NM_001245 NM_198845 NM_198846	20176	-	NM_007147 BC007778 AK292687 BC052997 D50419	59723	+	DQ892433 AF170484 BC029896 AK225753 U71383 NM_003830	118833	-	AY358140|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AF282256|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AK225931|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##BC035809|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AK095919|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##NM_053003|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##NM_033329|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##NM_001080405|CEACAM18|729767|carcinoembryonic antigen-related cell adhesion molecule 18##U71382|SIGLEC6|946|sialic acid binding Ig-like lectin 6##BC140798|SIGLEC6|946|sialic acid binding Ig-like lectin 6##BC035359|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK300182|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK300170|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK308174|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK309903|SIGLEC6|946|sialic acid binding Ig-like lectin 6##D86358|SIGLEC6|946|sialic acid binding Ig-like lectin 6##D86359|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177547|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177548|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177549|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001245|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_198845|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_198846|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_007147|ZNF175|7728|zinc finger protein 175##BC007778|ZNF175|7728|zinc finger protein 175##AK292687|ZNF175|7728|zinc finger protein 175##BC052997|ZNF175|7728|zinc finger protein 175##D50419|ZNF175|7728|zinc finger protein 175##DQ892433|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AF170484|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##BC029896|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AK225753|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##U71383|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_003830|SIGLEC5|8778|sialic acid binding Ig-like lectin 5	0.808268	CTCF.p2:-2:0.808
chr20	34542300	34542461	reg1016412.p1	4.421	+	AB464702 AM392883 AM393129 CR457188 EU446495 TSC_hg19_v1_chr20_-_34542233	-145	-	TSC_hg19_v1_chr20_+_34359958 BC093405 NM_016436 BC062681 AF258787 AY134747 AK054597 BC150178 AF220416 AK314503 BC080598 BC015538 BC016948 BC048210 BC006415	-182435	+	TSC_hg19_v1_chr20_-_34330183 NM_001242599 NM_001242600 NM_004902 NM_184234	-212160	-	TSC_hg19_v1_chr20_-_34542404 AF204271 BC000785 AF207829 NM_033630	86	-	NM_016558	900	-	AK057454 NM_001207076 NM_080834 BC030782 BC057288 BC114634 BC114945	14156	+	AM392883|SCAND1|51282|SCAN domain containing 1##AM393129|SCAND1|51282|SCAN domain containing 1##CR457188|SCAND1|51282|SCAN domain containing 1##EU446495|SCAND1|51282|SCAN domain containing 1##BC093405|PHF20|51230|PHD finger protein 20##NM_016436|PHF20|51230|PHD finger protein 20##BC062681|PHF20|51230|PHD finger protein 20##AF258787|PHF20|51230|PHD finger protein 20##AY134747|PHF20|51230|PHD finger protein 20##AK054597|PHF20|51230|PHD finger protein 20##BC150178|PHF20|51230|PHD finger protein 20##AF220416|PHF20|51230|PHD finger protein 20##AK314503|PHF20|51230|PHD finger protein 20##BC080598|PHF20|51230|PHD finger protein 20##BC016948|PHF20|51230|PHD finger protein 20##BC048210|PHF20|51230|PHD finger protein 20##BC006415|PHF20|51230|PHD finger protein 20##NM_001242599|RBM39|9584|RNA binding motif protein 39##NM_001242600|RBM39|9584|RNA binding motif protein 39##NM_004902|RBM39|9584|RNA binding motif protein 39##NM_184234|RBM39|9584|RNA binding motif protein 39##AF204271|SCAND1|51282|SCAN domain containing 1##BC000785|SCAND1|51282|SCAN domain containing 1##AF207829|SCAND1|51282|SCAN domain containing 1##NM_033630|SCAND1|51282|SCAN domain containing 1##NM_016558|SCAND1|51282|SCAN domain containing 1##AK057454|C20orf152|140894|chromosome 20 open reading frame 152##NM_001207076|C20orf152|140894|chromosome 20 open reading frame 152##NM_080834|C20orf152|140894|chromosome 20 open reading frame 152##BC030782|C20orf152|140894|chromosome 20 open reading frame 152##BC057288|C20orf152|140894|chromosome 20 open reading frame 152##BC114634|C20orf152|140894|chromosome 20 open reading frame 152##BC114945|C20orf152|140894|chromosome 20 open reading frame 152	0.691583	
chr2	136996397	136996578	reg1029599.p1	4.421	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-120811	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-122689	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-253271	-	TSC_hg19_v1_chr2_+_137523114 AK299929	526629	+	NM_001080427	751974	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1725447	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.0	
chr22	39861486	39861622	reg1025981.p2	4.421	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	-8018	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	-8234	+	TSC_hg19_v1_chr22_+_39795812 AK291668 AK316004 AK308903 AB591024 CU690722	-65743	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	21736	+	TSC_hg19_v1_chr22_+_39898257 NM_019008	36711	+	TSC_hg19_v1_chr22_+_39898332 AL834205	36756	+	BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK291668|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK316004|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK308903|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_019008|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL834205|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like	0.0	
chr2	242158537	242158718	reg1016405.p2	4.421	+	AY617079 AY617080 NM_001001666 NM_001001891	-30704	+	AK294043 TSC_hg19_v1_chr2_+_242089896 BC013001 BC000910 NM_002712 Z50749 BC012397 AB385583 BT007296 BT020134	-68736	+	CR749231 NM_001252120	-69234	-	TSC_hg19_v1_chr2_-_242212216 M64098	53593	-	TSC_hg19_v1_chr2_-_242212245 AK300312 NM_001243900 NM_203346	53617	-	TSC_hg19_v1_chr2_-_242212511 AK309075	53889	-	AY617079|ANO7|50636|anoctamin 7##AY617080|ANO7|50636|anoctamin 7##NM_001001666|ANO7|50636|anoctamin 7##NM_001001891|ANO7|50636|anoctamin 7##AK294043|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC013001|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC000910|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##NM_002712|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##Z50749|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC012397|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT007296|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT020134|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##CR749231|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252120|PASK|23178|PAS domain containing serine/threonine kinase##M64098|HDLBP|3069|high density lipoprotein binding protein##AK300312|HDLBP|3069|high density lipoprotein binding protein##NM_001243900|HDLBP|3069|high density lipoprotein binding protein##NM_203346|HDLBP|3069|high density lipoprotein binding protein##AK309075|HDLBP|3069|high density lipoprotein binding protein	0.0	
chr2	97472282	97472463	reg1032582.p2	4.421	+	AK293915 TSC_hg19_v1_chr2_+_97454352	-18035	+	TSC_hg19_v1_chr2_+_97426638 BC063295 NM_020184 AF202777 AB046812	-45623	+	AK304515 AK075347 AK295463 AK299740 AK301077 AK308085 AK316331 AL136617 TSC_hg19_v1_chr2_-_97405802 AK312249 NM_001142292 NM_030805 AK310100	-66559	-	TSC_hg19_v1_chr2_+_97482006 BC037272 AK126847 NM_017623 NM_199078 BC007199 AF216965 AK000025 CU675553	10110	+	AF492401 AY196212 BC107056 AK057011 AK092564 AX747600 NM_144994	37373	-	TSC_hg19_v1_chr2_-_97523744 AB528054 CU689148 AF151034 BC031303 AB209367 AK312193 NM_016466	51370	-	AK293915|CNNM4|26504|cyclin M4##BC063295|CNNM4|26504|cyclin M4##NM_020184|CNNM4|26504|cyclin M4##AF202777|CNNM4|26504|cyclin M4##AB046812|CNNM4|26504|cyclin M4##AK304515|LMAN2L|81562|lectin, mannose-binding 2-like##AK075347|LMAN2L|81562|lectin, mannose-binding 2-like##AK295463|LMAN2L|81562|lectin, mannose-binding 2-like##AK299740|LMAN2L|81562|lectin, mannose-binding 2-like##AK301077|LMAN2L|81562|lectin, mannose-binding 2-like##AK308085|LMAN2L|81562|lectin, mannose-binding 2-like##AK316331|LMAN2L|81562|lectin, mannose-binding 2-like##AL136617|LMAN2L|81562|lectin, mannose-binding 2-like##AK312249|LMAN2L|81562|lectin, mannose-binding 2-like##NM_001142292|LMAN2L|81562|lectin, mannose-binding 2-like##NM_030805|LMAN2L|81562|lectin, mannose-binding 2-like##AK310100|LMAN2L|81562|lectin, mannose-binding 2-like##BC037272|CNNM3|26505|cyclin M3##AK126847|CNNM3|26505|cyclin M3##NM_017623|CNNM3|26505|cyclin M3##NM_199078|CNNM3|26505|cyclin M3##BC007199|CNNM3|26505|cyclin M3##AF216965|CNNM3|26505|cyclin M3##AK000025|CNNM3|26505|cyclin M3##AF492401|ANKRD23|200539|ankyrin repeat domain 23##AY196212|ANKRD23|200539|ankyrin repeat domain 23##BC107056|ANKRD23|200539|ankyrin repeat domain 23##AK057011|ANKRD23|200539|ankyrin repeat domain 23##AK092564|ANKRD23|200539|ankyrin repeat domain 23##NM_144994|ANKRD23|200539|ankyrin repeat domain 23##AF151034|ANKRD39|51239|ankyrin repeat domain 39##BC031303|ANKRD39|51239|ankyrin repeat domain 39##AK312193|ANKRD39|51239|ankyrin repeat domain 39##NM_016466|ANKRD39|51239|ankyrin repeat domain 39	0.0	
chr10	108771006	108771111	reg1033202.p1	4.420	+	TSC_hg19_v1_chr10_-_108459000 AK123752	-311999	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-2370013	+	AB028982 NM_014978	-2370200	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	153318	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	2912151	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	2912219	-	AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.0	
chr11	130002076	130002256	reg1004227.p1	4.420	+	TSC_hg19_v1_chr11_+_129991591 L23113	-10538	+	L23114 TSC_hg19_v1_chr11_+_129979349	-22827	+	AK128162 NM_001243299	-61704	+	TSC_hg19_v1_chr11_+_130029676 NM_021978	27511	+	AK314173 TSC_hg19_v1_chr11_+_130029706	27538	+	TSC_hg19_v1_chr11_+_130029713 BC030532	27575	+	L23113|APLP2|334|amyloid beta (A4) precursor-like protein 2##L23114|APLP2|334|amyloid beta (A4) precursor-like protein 2##AK128162|APLP2|334|amyloid beta (A4) precursor-like protein 2##NM_001243299|APLP2|334|amyloid beta (A4) precursor-like protein 2##NM_021978|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##AK314173|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##BC030532|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)	0.0	
chr1	182580612	182580741	reg1030115.p2	4.420	+	AF493937 BT006638 CU675307 AB528682 U94829 U70426 BC006243 TSC_hg19_v1_chr1_-_182573525 AK301261 AK311880 NM_002928	-7206	-	CU675308 TSC_hg19_v1_chr1_+_182569465	-11230	+	AK315231 BC090934 TSC_hg19_v1_chr1_-_182558392 CR627369 NM_021133	-22293	-	BC069677 BC069718 BC103865 BC103866 BC103867 AF297015 NM_001102450 NM_033345	61365	-	NM_001200050 NM_001200051 NM_001200052 NM_001200056 NM_030769 BC042003	177908	+	BC034966 AK313225 BC058003 TSC_hg19_v1_chr1_+_182758907 AK297017 AK301068 AY336748	178215	+	AF493937|RGS16|6004|regulator of G-protein signaling 16##BT006638|RGS16|6004|regulator of G-protein signaling 16##U94829|RGS16|6004|regulator of G-protein signaling 16##U70426|RGS16|6004|regulator of G-protein signaling 16##BC006243|RGS16|6004|regulator of G-protein signaling 16##AK301261|RGS16|6004|regulator of G-protein signaling 16##AK311880|RGS16|6004|regulator of G-protein signaling 16##NM_002928|RGS16|6004|regulator of G-protein signaling 16##AK315231|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##BC090934|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##CR627369|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##NM_021133|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##BC069677|RGS8|85397|regulator of G-protein signaling 8##BC069718|RGS8|85397|regulator of G-protein signaling 8##BC103865|RGS8|85397|regulator of G-protein signaling 8##BC103866|RGS8|85397|regulator of G-protein signaling 8##BC103867|RGS8|85397|regulator of G-protein signaling 8##AF297015|RGS8|85397|regulator of G-protein signaling 8##NM_001102450|RGS8|85397|regulator of G-protein signaling 8##NM_033345|RGS8|85397|regulator of G-protein signaling 8##NM_001200050|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200051|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200052|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_001200056|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##NM_030769|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC042003|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC034966|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK313225|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##BC058003|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK297017|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AK301068|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)##AY336748|NPL|80896|N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)	0.0	
chr13	48642354	48642447	reg1034274.p2	4.420	+	TSC_hg19_v1_chr13_-_48612129 AK316271	-30292	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	-30586	+	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	-66949	-	AF230381 AF300618 CR457276 CR541830 DQ893076 DQ896333 TSC_hg19_v1_chr13_-_48669222	26821	-	AK223017 TSC_hg19_v1_chr13_-_48669236 AF161475	26834	-	TSC_hg19_v1_chr13_-_48669241 AK001934 AK222713 NM_014166 AK301835 BC005189	26869	-	AK316271|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF230381|MED4|29079|mediator complex subunit 4##AF300618|MED4|29079|mediator complex subunit 4##CR457276|MED4|29079|mediator complex subunit 4##CR541830|MED4|29079|mediator complex subunit 4##DQ893076|MED4|29079|mediator complex subunit 4##DQ896333|MED4|29079|mediator complex subunit 4##AK223017|MED4|29079|mediator complex subunit 4##AF161475|MED4|29079|mediator complex subunit 4##AK001934|MED4|29079|mediator complex subunit 4##AK222713|MED4|29079|mediator complex subunit 4##NM_014166|MED4|29079|mediator complex subunit 4##AK301835|MED4|29079|mediator complex subunit 4##BC005189|MED4|29079|mediator complex subunit 4	0.983918	CTCF.p2:3:0.984
chr17	55485815	55485921	reg1031407.p1	4.420	+	AK093888 AX748353 NM_170721	-151495	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-151895	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-322725	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	441536	-	AK000746 NM_017949	494881	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	546808	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.0	
chr18	34349701	34349834	reg1032051.p1	4.420	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	-472053	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-582291	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-639879	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	58996	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	59127	-	AB073382 TSC_hg19_v1_chr18_-_34408948	59185	-	AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.360225	CTCF.p2:10:0.341
chr3	113254901	113255001	reg1029121.p2	4.420	+	NM_017699	-3734	+	AY099107 BC036951 TSC_hg19_v1_chr3_-_113234023 AK057966 AL832327 AL832148 NM_144718	-20958	-	TSC_hg19_v1_chr3_-_113233690 AK296160	-21265	-	TSC_hg19_v1_chr3_-_113415490 BC043383 NM_001009899	160461	-	AK296456 TSC_hg19_v1_chr3_-_113464788	209763	-	TSC_hg19_v1_chr3_-_113465043 CR749314 AK023090 AK307184 BC012731 AK311403 AK023256	210092	-	NM_017699|SIDT1|54847|SID1 transmembrane family, member 1##AY099107|SPICE1|152185|spindle and centriole associated protein 1##BC036951|SPICE1|152185|spindle and centriole associated protein 1##AK057966|SPICE1|152185|spindle and centriole associated protein 1##AL832327|SPICE1|152185|spindle and centriole associated protein 1##AL832148|SPICE1|152185|spindle and centriole associated protein 1##NM_144718|SPICE1|152185|spindle and centriole associated protein 1##AK296160|SPICE1|152185|spindle and centriole associated protein 1##BC043383|KIAA2018|205717|KIAA2018##NM_001009899|KIAA2018|205717|KIAA2018##AK296456|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##CR749314|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK023090|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK307184|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##BC012731|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK023256|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit	0.229603	CTCF.p2:1:0.230
chr5	81647961	81648055	reg1005009.p2	4.420	+	BC093982 BC112191 NM_001017971	-46843	+	TSC_hg19_v1_chr5_-_81574219 NM_001025	-73789	-	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	-73837	-	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	725189	-	TSC_hg19_v1_chr5_-_82373255 NM_174909	725254	-	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	725375	+	BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001025|RPS23|6228|ribosomal protein S23##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##NM_174909|TMEM167A|153339|transmembrane protein 167A##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4	0.0	
chr1	101775191	101775371	reg1010277.p2	4.419	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-72711	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-72900	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-283848	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	687206	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	687509	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1721502	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.0	
chr11	63655990	63656087	reg1030343.p1	4.419	+	TSC_hg19_v1_chr11_+_63606599 AK307858	-49434	+	TSC_hg19_v1_chr11_+_63606564 AK225766	-49489	+	TSC_hg19_v1_chr11_+_63606486 AB188493 NM_001039469 NM_001163296 NM_001163297 NM_004954	-49612	+	NM_017490 AK290339 TSC_hg19_v1_chr11_+_63656059 X97630 AY562188	38	+	BC023587 NM_173587	28277	-	TSC_hg19_v1_chr11_-_63684632 AB593132	28601	-	AK307858|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK225766|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AB188493|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_001039469|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_001163296|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_001163297|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_004954|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_017490|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK290339|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##X97630|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AY562188|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##BC023587|RCOR2|283248|REST corepressor 2##NM_173587|RCOR2|283248|REST corepressor 2##AB593132|RCOR2|283248|REST corepressor 2	0.013268	
chr1	3713069	3713242	reg1028284.p1	4.419	+	TSC_hg19_v1_chr1_-_3713056 BC031301 NM_020710	-89	-	TSC_hg19_v1_chr1_+_3689334 BC042129 NM_001163724	-23819	+	AK057387 BC112112 NM_152492 BC112108	-44192	+	TSC_hg19_v1_chr1_-_3773757 AB011134 AK308191	60533	-	TSC_hg19_v1_chr1_-_3773776 BC001640 BC047450 BC026020 BC050721 NM_014704	60629	-	BC048797 NM_004402	60689	+	BC031301|LRRC47|57470|leucine rich repeat containing 47##NM_020710|LRRC47|57470|leucine rich repeat containing 47##BC042129|LOC388588|388588|uncharacterized protein LOC388588##NM_001163724|LOC388588|388588|uncharacterized protein LOC388588##AK057387|CCDC27|148870|coiled-coil domain containing 27##BC112112|CCDC27|148870|coiled-coil domain containing 27##NM_152492|CCDC27|148870|coiled-coil domain containing 27##BC112108|CCDC27|148870|coiled-coil domain containing 27##AB011134|CEP104|9731|centrosomal protein 104kDa##AK308191|CEP104|9731|centrosomal protein 104kDa##BC001640|CEP104|9731|centrosomal protein 104kDa##BC047450|CEP104|9731|centrosomal protein 104kDa##BC026020|CEP104|9731|centrosomal protein 104kDa##BC050721|CEP104|9731|centrosomal protein 104kDa##NM_014704|CEP104|9731|centrosomal protein 104kDa##BC048797|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)##NM_004402|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)	0.0	
chr16	32994179	32994360	reg1021539.p2	4.419	+	AK300387 TSC_hg19_v1_chr16_+_32752635	-241633	+	AL133588 NM_016212	-306217	-	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	-306836	-	AL133588 NM_016212	210710	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	211329	+	AL133588 NM_016212	267245	+	AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3	3.392779	CTCF.p2:0:0.999	CTCF.p2:42:0.670	CTCF.p2:-63:0.999	CTCF.p2:80:0.725
chr17	3978283	3978366	reg1029062.p1	4.419	+	AB462957 DQ893317 EU176809 Z69881 TSC_hg19_v1_chr17_-_3867744 AF068220 BC035729 AK292716 NM_005173 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958	-110623	-	NM_002558	-158365	-	X83688 U45448 BC044657 BC027949 TSC_hg19_v1_chr17_-_3819762 AK310981 AK313264 AF020498	-158576	-	AB384472 TSC_hg19_v1_chr17_-_4046240	67891	-	TSC_hg19_v1_chr17_-_4046246 AB007859 BC151836 NM_015113	67928	-	TSC_hg19_v1_chr17_-_4046308 AK127482	67986	-	DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_002558|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##X83688|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##U45448|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC044657|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC027949|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AK313264|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AF020498|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	0.794418	CTCF.p2:0:0.794
chrX	49846370	49846477	reg1029007.p2	4.419	+	NM_000084 AK308089 TSC_hg19_v1_chrX_+_49832243 AK290940	-14178	+	TSC_hg19_v1_chrX_+_49687274 AK092049 NM_001127898 NM_001127899 AK056560	-159177	+	NM_001145073	-201954	+	NM_139289 BC033007 BC070150 TSC_hg19_v1_chrX_-_49965024	118590	-	AK292463 BC126250 BC126252 NM_003886 Y15195	119237	-	AJ314764 AJ314765 AJ314766 AJ416458 NM_033031 NM_033670	181116	+	NM_000084|CLCN5|1184|chloride channel 5##AK308089|CLCN5|1184|chloride channel 5##AK290940|CLCN5|1184|chloride channel 5##AK092049|CLCN5|1184|chloride channel 5##NM_001127898|CLCN5|1184|chloride channel 5##NM_001127899|CLCN5|1184|chloride channel 5##AK056560|CLCN5|1184|chloride channel 5##NM_001145073|USP27X|389856|ubiquitin specific peptidase 27, X-linked##NM_139289|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC033007|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC070150|AKAP4|8852|A kinase (PRKA) anchor protein 4##AK292463|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC126250|AKAP4|8852|A kinase (PRKA) anchor protein 4##BC126252|AKAP4|8852|A kinase (PRKA) anchor protein 4##NM_003886|AKAP4|8852|A kinase (PRKA) anchor protein 4##Y15195|AKAP4|8852|A kinase (PRKA) anchor protein 4##AJ314764|CCNB3|85417|cyclin B3##AJ314765|CCNB3|85417|cyclin B3##AJ314766|CCNB3|85417|cyclin B3##AJ416458|CCNB3|85417|cyclin B3##NM_033031|CCNB3|85417|cyclin B3##NM_033670|CCNB3|85417|cyclin B3	0.024557	
chr10	74855328	74855407	reg1012246.p1	4.418	+	AK311349 TSC_hg19_v1_chr10_-_74714574	-140795	-	AF349540 BC093996 BC111946 BC143532 AY358032 NM_032562 AF339053 AK313712 TSC_hg19_v1_chr10_-_74714543	-140856	-	AK096435 NM_152635 BC126440 AY358339 AY013707 TSC_hg19_v1_chr10_+_74653529	-201934	+	TSC_hg19_v1_chr10_-_74856621 M24486 M24487 AK312593 AK222960 BC034998	1238	-	TSC_hg19_v1_chr10_-_74856725 NM_000917 NM_001017962 NM_001142595 NM_001142596	1403	-	NM_015901 BC031224 AK303235 TSC_hg19_v1_chr10_+_74870272 AK300980 AK309755 AK316538 BC046173 BC038833	14884	+	AK311349|PLA2G12B|84647|phospholipase A2, group XIIB##AF349540|PLA2G12B|84647|phospholipase A2, group XIIB##BC093996|PLA2G12B|84647|phospholipase A2, group XIIB##BC111946|PLA2G12B|84647|phospholipase A2, group XIIB##BC143532|PLA2G12B|84647|phospholipase A2, group XIIB##AY358032|PLA2G12B|84647|phospholipase A2, group XIIB##NM_032562|PLA2G12B|84647|phospholipase A2, group XIIB##AF339053|PLA2G12B|84647|phospholipase A2, group XIIB##AK313712|PLA2G12B|84647|phospholipase A2, group XIIB##AK096435|OIT3|170392|oncoprotein induced transcript 3##NM_152635|OIT3|170392|oncoprotein induced transcript 3##BC126440|OIT3|170392|oncoprotein induced transcript 3##AY358339|OIT3|170392|oncoprotein induced transcript 3##AY013707|OIT3|170392|oncoprotein induced transcript 3##M24486|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##M24487|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##AK312593|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##AK222960|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##BC034998|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_000917|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001017962|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001142595|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001142596|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_015901|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC031224|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK303235|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK300980|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK309755|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK316538|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC046173|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC038833|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13	0.0	
chr1	15480871	15481051	reg1022786.p2	4.418	+	TSC_hg19_v1_chr1_+_15480249 AK001061 NM_001136218 NM_018022 BC000593 BC005177 AK098467	-713	+	AK129922 TSC_hg19_v1_chr1_+_15479310	-1657	+	AK292184 NM_001136216 NM_001136217 TSC_hg19_v1_chr1_+_15479047	-1930	+	AK057963 NM_052929	92806	+	TSC_hg19_v1_chr1_+_15736390 NM_024329	255439	+	BC068473 TSC_hg19_v1_chr1_+_15736425 BC007233 BC014923 BC023611	255474	+	AK001061|TMEM51|55092|transmembrane protein 51##NM_001136218|TMEM51|55092|transmembrane protein 51##NM_018022|TMEM51|55092|transmembrane protein 51##BC000593|TMEM51|55092|transmembrane protein 51##BC005177|TMEM51|55092|transmembrane protein 51##AK098467|TMEM51|55092|transmembrane protein 51##AK129922|TMEM51|55092|transmembrane protein 51##AK292184|TMEM51|55092|transmembrane protein 51##NM_001136216|TMEM51|55092|transmembrane protein 51##NM_001136217|TMEM51|55092|transmembrane protein 51##AK057963|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##NM_052929|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##NM_024329|EFHD2|79180|EF-hand domain family, member D2##BC068473|EFHD2|79180|EF-hand domain family, member D2##BC007233|EFHD2|79180|EF-hand domain family, member D2##BC014923|EFHD2|79180|EF-hand domain family, member D2##BC023611|EFHD2|79180|EF-hand domain family, member D2	0.0	
chr14	24593343	24593490	reg1029361.p2	4.418	+	TSC_hg19_v1_chr14_+_24584483 AK094478 BX648224 AK292797 NM_181357 AK057636 AK296742 BX247970 BX161405 AF130070	-8776	+	AF267858 TSC_hg19_v1_chr14_+_24584412	-9026	+	TSC_hg19_v1_chr14_-_24584230 BX161381	-9232	-	BC139911 NM_203402 TSC_hg19_v1_chr14_+_24600824	7333	+	TSC_hg19_v1_chr14_+_24605373 NM_006263 NM_176783 L07633 BC000352 BC007503 AK307150	11962	+	TSC_hg19_v1_chr14_+_24605411 AK308572 AK311490 AK312211 AB590114 DQ891838 DQ895024 BT019337 CR456780 CR541658	12016	+	AK094478|DCAF11|80344|DDB1 and CUL4 associated factor 11##BX648224|DCAF11|80344|DDB1 and CUL4 associated factor 11##AK292797|DCAF11|80344|DDB1 and CUL4 associated factor 11##NM_181357|DCAF11|80344|DDB1 and CUL4 associated factor 11##AK057636|DCAF11|80344|DDB1 and CUL4 associated factor 11##AK296742|DCAF11|80344|DDB1 and CUL4 associated factor 11##BX247970|DCAF11|80344|DDB1 and CUL4 associated factor 11##BX161405|DCAF11|80344|DDB1 and CUL4 associated factor 11##AF130070|DCAF11|80344|DDB1 and CUL4 associated factor 11##AF267858|DCAF11|80344|DDB1 and CUL4 associated factor 11##BX161381|NRL|4901|neural retina leucine zipper##BC139911|FITM1|161247|fat storage-inducing transmembrane protein 1##NM_203402|FITM1|161247|fat storage-inducing transmembrane protein 1##NM_006263|PSME1|5720|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)##NM_176783|PSME1|5720|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)##L07633|PSME1|5720|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)##BC000352|PSME1|5720|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)##BC007503|PSME1|5720|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)##AK311490|PSME1|5720|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)##AK312211|PSME1|5720|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)##DQ891838|PSME1|5720|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)##DQ895024|PSME1|5720|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)##BT019337|PSME1|5720|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)##CR456780|PSME1|5720|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)##CR541658|PSME1|5720|proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)	0.0	
chr20	43429183	43429287	reg1029618.p1	4.418	+	AF257081 NM_022358 BC093874 BC143282 AF294350 AF294351 AF336342	-54716	+	TSC_hg19_v1_chr20_+_43344010 AK313853 BC064379 AF083500 AF074604 AY358915 CU687868	-85218	+	NM_003881 BC017782 TSC_hg19_v1_chr20_+_43343953	-85315	+	AK126807 BC104191 BC104190 BC112985 AY326954 NM_001205317 NM_182970	9694	-	TSC_hg19_v1_chr20_+_43514345 NM_003404 NM_139323 AK292717 BC001359	85109	+	TSC_hg19_v1_chr20_+_43514390 AL834170 AB209759	85135	+	AF257081|KCNK15|60598|potassium channel, subfamily K, member 15##NM_022358|KCNK15|60598|potassium channel, subfamily K, member 15##BC093874|KCNK15|60598|potassium channel, subfamily K, member 15##BC143282|KCNK15|60598|potassium channel, subfamily K, member 15##AF294350|KCNK15|60598|potassium channel, subfamily K, member 15##AF294351|KCNK15|60598|potassium channel, subfamily K, member 15##AF336342|KCNK15|60598|potassium channel, subfamily K, member 15##AK313853|WISP2|8839|WNT1 inducible signaling pathway protein 2##BC064379|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF083500|WISP2|8839|WNT1 inducible signaling pathway protein 2##AF074604|WISP2|8839|WNT1 inducible signaling pathway protein 2##AY358915|WISP2|8839|WNT1 inducible signaling pathway protein 2##NM_003881|WISP2|8839|WNT1 inducible signaling pathway protein 2##BC017782|WISP2|8839|WNT1 inducible signaling pathway protein 2##AK126807|RIMS4|140730|regulating synaptic membrane exocytosis 4##BC104191|RIMS4|140730|regulating synaptic membrane exocytosis 4##BC104190|RIMS4|140730|regulating synaptic membrane exocytosis 4##BC112985|RIMS4|140730|regulating synaptic membrane exocytosis 4##AY326954|RIMS4|140730|regulating synaptic membrane exocytosis 4##NM_001205317|RIMS4|140730|regulating synaptic membrane exocytosis 4##NM_182970|RIMS4|140730|regulating synaptic membrane exocytosis 4##NM_003404|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##NM_139323|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AK292717|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##BC001359|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AL834170|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide##AB209759|YWHAB|7529|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	0.298868	CTCF.p2:-5:0.299
chr3	98464175	98464284	reg1029120.p1	4.418	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-12642	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-12984	+	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	-151810	-	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	156263	-	AK311449 NM_001850 NM_020351 AF170702 BC013581	893221	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	1072516	+	AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26	0.0	
chr6	108681837	108681943	reg1026809.p1	4.418	+	TSC_hg19_v1_chr6_+_108616194 AF520418 BC018445 NM_145315	-65751	+	TSC_hg19_v1_chr6_-_108582316 NM_003795 NM_152827	-99505	-	TSC_hg19_v1_chr6_-_108582245 BC015179 BC014580 AK289476	-99652	-	TSC_hg19_v1_chr6_+_108881027 NM_201559 BC020227 BC021224	199133	+	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	200185	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	200367	+	AF520418|LACE1|246269|lactation elevated 1##BC018445|LACE1|246269|lactation elevated 1##NM_145315|LACE1|246269|lactation elevated 1##NM_003795|SNX3|8724|sorting nexin 3##NM_152827|SNX3|8724|sorting nexin 3##BC015179|SNX3|8724|sorting nexin 3##BC014580|SNX3|8724|sorting nexin 3##AK289476|SNX3|8724|sorting nexin 3##NM_201559|FOXO3|2309|forkhead box O3##BC020227|FOXO3|2309|forkhead box O3##BC021224|FOXO3|2309|forkhead box O3##BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3	0.0	
chr6	149021291	149021419	reg1031455.p1	4.418	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-357164	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-357365	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	-357592	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	46854	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	617748	+	AK315038 NM_015093 AK307650	618086	+	AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##NM_005715|UST|10090|uronyl-2-sulfotransferase##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2	0.330522	CTCF.p2:39:0.331
chr8	36631235	36631324	reg1030796.p2	4.418	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-1538292	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-3173784	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	-3173820	-	NM_001031836 AK302391 BC028701	10591	+	TSC_hg19_v1_chr8_-_37457377 AK025743	826089	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	922038	+	AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703	0.999714	CTCF.p2:20:1.000
chr14	29104729	29104860	reg1033836.p1	4.417	+	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	-2037806	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	-3585556	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-4001376	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	131434	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	132119	+	TSC_hg19_v1_chr14_+_29241992 BX248251	137201	+	NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23	0.999143	CTCF.p2:17:0.999
chr19	36490016	36490178	reg1033961.p1	4.417	+	TSC_hg19_v1_chr19_+_36486091 NM_001042631 BC007205 BC064605 BC069054 BC137516 BC137517	-4003	+	BC003578 NM_024509	-62076	+	TSC_hg19_v1_chr19_-_36399212 NM_001173514 NM_001173515 NM_003332 NM_198125	-90884	-	CU690916 AK093764 AX748293 NM_001039876 BC052573 BC038360	9541	-	TSC_hg19_v1_chr19_-_36505110 BC036061 AK315894 BC105801 BC007601 AK304805 AK310130 AK314150	15014	-	TSC_hg19_v1_chr19_-_36505128 AK310704 NM_032878 NM_198867 AB273714	15040	-	NM_001042631|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC007205|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC064605|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC069054|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137516|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137517|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC003578|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_024509|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_001173514|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_001173515|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_003332|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_198125|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AK093764|C19orf46|163183|chromosome 19 open reading frame 46##NM_001039876|C19orf46|163183|chromosome 19 open reading frame 46##BC052573|C19orf46|163183|chromosome 19 open reading frame 46##BC038360|C19orf46|163183|chromosome 19 open reading frame 46##BC036061|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##AK315894|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##BC105801|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##BC007601|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##AK304805|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##AK310130|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##AK314150|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##AK310704|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##NM_032878|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##NM_198867|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)##AB273714|ALKBH6|84964|alkB, alkylation repair homolog 6 (E. coli)	0.99553	CTCF.p2:6:0.996
chr22	17738937	17739060	reg1026580.p1	4.417	+	AK314321 TSC_hg19_v1_chr22_-_17700267 AK295174 AK292689	-38635	-	AF190746 NM_017424	-48220	-	TSC_hg19_v1_chr22_-_17680487 AK027682 AK074702 NM_177405	-58484	-	TSC_hg19_v1_chr22_-_17747522 AF277398	8573	-	TSC_hg19_v1_chr22_+_18043149 AJ428203 AY008285 NM_031481 BC031644 AK308974 AK095706 AK309110	304221	+	BT007128 CU012943 CU013231 EU831478 EU831565 AB528072 CR456385 X71491 TSC_hg19_v1_chr22_-_18111488 X76228 BC004443	372447	-	AK314321|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK295174|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK292689|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF190746|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_017424|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK027682|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK074702|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_177405|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF277398|CECR3|27442|cat eye syndrome chromosome region, candidate 3 (non-protein coding)##AJ428203|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AY008285|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##NM_031481|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BC031644|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK308974|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK095706|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK309110|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BT007128|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU012943|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU013231|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831478|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831565|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CR456385|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X71491|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X76228|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##BC004443|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1	0.0	
chr2	242314144	242314290	reg1032761.p2	4.417	+	TSC_hg19_v1_chr2_+_242295703 NM_014808 AK300435 AB018336 BC021301	-18517	+	TSC_hg19_v1_chr2_+_242255366 AK294563	-58851	+	TSC_hg19_v1_chr2_+_242255355 D28540	-58862	+	BT019961 CU675833 CU677445 DQ893230 DQ896559 AB529004 D63780 X99325 TSC_hg19_v1_chr2_-_242447784 BC015793	133410	-	TSC_hg19_v1_chr2_-_242447969 AK092161 AK302751 AK297374 AK301214 AK291808 AK291947	133742	-	TSC_hg19_v1_chr2_-_242448000 BC091505 AK315966 BC007852 NM_006374	133814	-	NM_014808|FARP2|9855|FERM, RhoGEF and pleckstrin domain protein 2##AK300435|FARP2|9855|FERM, RhoGEF and pleckstrin domain protein 2##AB018336|FARP2|9855|FERM, RhoGEF and pleckstrin domain protein 2##BC021301|FARP2|9855|FERM, RhoGEF and pleckstrin domain protein 2##AK294563|SEPT2|4735|septin 2##D28540|SEPT2|4735|septin 2##BT019961|STK25|10494|serine/threonine kinase 25##DQ893230|STK25|10494|serine/threonine kinase 25##DQ896559|STK25|10494|serine/threonine kinase 25##D63780|STK25|10494|serine/threonine kinase 25##X99325|STK25|10494|serine/threonine kinase 25##BC015793|STK25|10494|serine/threonine kinase 25##AK092161|STK25|10494|serine/threonine kinase 25##AK302751|STK25|10494|serine/threonine kinase 25##AK297374|STK25|10494|serine/threonine kinase 25##AK301214|STK25|10494|serine/threonine kinase 25##AK291808|STK25|10494|serine/threonine kinase 25##AK291947|STK25|10494|serine/threonine kinase 25##BC091505|STK25|10494|serine/threonine kinase 25##AK315966|STK25|10494|serine/threonine kinase 25##BC007852|STK25|10494|serine/threonine kinase 25##NM_006374|STK25|10494|serine/threonine kinase 25	0.0	
chr2	47136974	47137074	reg1030518.p1	4.417	+	TSC_hg19_v1_chr2_-_47134945 M23161	-2013	-	TSC_hg19_v1_chr2_+_46926340 BC032862 AF073958 NM_144949	-210623	+	TSC_hg19_v1_chr2_+_46926049 AK290194 AK296796 AB014571 AL136896 NM_014011	-210951	+	TSC_hg19_v1_chr2_-_47142893 AF475284 BC037845	5867	-	TSC_hg19_v1_chr2_-_47142934 BC040357	5910	-	TSC_hg19_v1_chr2_-_47142939 AL833900 AF537214 CR749562	5919	-	M23161|MCFD2|90411|multiple coagulation factor deficiency 2##BC032862|SOCS5|9655|suppressor of cytokine signaling 5##AF073958|SOCS5|9655|suppressor of cytokine signaling 5##NM_144949|SOCS5|9655|suppressor of cytokine signaling 5##AK290194|SOCS5|9655|suppressor of cytokine signaling 5##AB014571|SOCS5|9655|suppressor of cytokine signaling 5##AL136896|SOCS5|9655|suppressor of cytokine signaling 5##NM_014011|SOCS5|9655|suppressor of cytokine signaling 5##AF475284|MCFD2|90411|multiple coagulation factor deficiency 2##BC037845|MCFD2|90411|multiple coagulation factor deficiency 2##BC040357|MCFD2|90411|multiple coagulation factor deficiency 2##AL833900|MCFD2|90411|multiple coagulation factor deficiency 2##AF537214|MCFD2|90411|multiple coagulation factor deficiency 2##CR749562|MCFD2|90411|multiple coagulation factor deficiency 2	0.0	
chr3	108790308	108790488	reg1030135.p1	4.417	+	AF110003 EU832759 GQ129299 AF110002 BC103993 BC103994 AB593147 NM_005459	-117787	-	AK291991 AJ240085 AF161547 NM_016388 BC025713 AJ224878	-248804	+	HQ258043 AM050721 BC113502 BC113528 BC069318 AF290873 AF323084 AY358655 NM_032579 TSC_hg19_v1_chr3_-_108476258	-314253	-	CU690636 BC050307 AK302642 AF084946 BC028680 NM_014429	46552	-	AK026416 TSC_hg19_v1_chr3_+_108855566	65165	+	BC018070 AY283672 NM_138815	244903	-	AF110003|GUCA1C|9626|guanylate cyclase activator 1C##EU832759|GUCA1C|9626|guanylate cyclase activator 1C##GQ129299|GUCA1C|9626|guanylate cyclase activator 1C##AF110002|GUCA1C|9626|guanylate cyclase activator 1C##BC103993|GUCA1C|9626|guanylate cyclase activator 1C##BC103994|GUCA1C|9626|guanylate cyclase activator 1C##AB593147|GUCA1C|9626|guanylate cyclase activator 1C##NM_005459|GUCA1C|9626|guanylate cyclase activator 1C##AK291991|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ240085|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AF161547|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##NM_016388|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##BC025713|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ224878|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##HQ258043|RETNLB|84666|resistin like beta##AM050721|RETNLB|84666|resistin like beta##BC113502|RETNLB|84666|resistin like beta##BC113528|RETNLB|84666|resistin like beta##BC069318|RETNLB|84666|resistin like beta##AF290873|RETNLB|84666|resistin like beta##AF323084|RETNLB|84666|resistin like beta##AY358655|RETNLB|84666|resistin like beta##NM_032579|RETNLB|84666|resistin like beta##BC050307|MORC1|27136|MORC family CW-type zinc finger 1##AK302642|MORC1|27136|MORC family CW-type zinc finger 1##AF084946|MORC1|27136|MORC family CW-type zinc finger 1##BC028680|MORC1|27136|MORC family CW-type zinc finger 1##NM_014429|MORC1|27136|MORC family CW-type zinc finger 1##AK026416|FLJ22763|401081|uncharacterized LOC401081##BC018070|DPPA2|151871|developmental pluripotency associated 2##AY283672|DPPA2|151871|developmental pluripotency associated 2##NM_138815|DPPA2|151871|developmental pluripotency associated 2	0.0	
chr4	15480913	15481075	reg1004740.p2	4.417	+	TSC_hg19_v1_chr4_+_15480833 AB037766 BC103710	-145	+	NM_001080522 NM_001164720 NM_020785 AK096047 AK309178 BX647334 BC061921 BC053865 BC070395 EU450799	-9420	+	NM_031911 AF329839	-51347	+	AF157323 AM392665 AM393475 CU688970 DQ892452 DQ895664 AF176700 AF199420 TSC_hg19_v1_chr4_-_15656935	175921	-	TSC_hg19_v1_chr4_-_15656965 AF142481 AK310860 BC012320	175960	-	TSC_hg19_v1_chr4_-_15656974 BX537957 BC030656 AK295510 NM_001193534 NM_001193535 NM_012161	176021	-	AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_001080522|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_001164720|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_020785|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AK096047|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AK309178|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BX647334|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC061921|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC053865|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC070395|CC2D2A|57545|coiled-coil and C2 domain containing 2A##EU450799|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AF157323|FBXL5|26234|F-box and leucine-rich repeat protein 5##AM392665|FBXL5|26234|F-box and leucine-rich repeat protein 5##AM393475|FBXL5|26234|F-box and leucine-rich repeat protein 5##DQ892452|FBXL5|26234|F-box and leucine-rich repeat protein 5##DQ895664|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF176700|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF199420|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF142481|FBXL5|26234|F-box and leucine-rich repeat protein 5##AK310860|FBXL5|26234|F-box and leucine-rich repeat protein 5##BC012320|FBXL5|26234|F-box and leucine-rich repeat protein 5##BX537957|FBXL5|26234|F-box and leucine-rich repeat protein 5##BC030656|FBXL5|26234|F-box and leucine-rich repeat protein 5##AK295510|FBXL5|26234|F-box and leucine-rich repeat protein 5##NM_001193534|FBXL5|26234|F-box and leucine-rich repeat protein 5##NM_001193535|FBXL5|26234|F-box and leucine-rich repeat protein 5##NM_012161|FBXL5|26234|F-box and leucine-rich repeat protein 5	0.0	
chr8	82545557	82545662	reg1045538.p1	4.417	+	NM_001105281 EU733650 BC146973 BC146981	-102029	-	AB590738 BT006809 CR456903 J02874 TSC_hg19_v1_chr8_-_82395472 BC003672 NM_001442	-150171	-	AB528797 NM_001080526	-171852	-	AK300750 TSC_hg19_v1_chr8_-_82598565 AK312823 AK297078 BC008381 BC009565 AF042729 NM_001144878 NM_001144879 NM_005536	52943	-	AY825924 NM_001010893 BC136625 BC136631	61637	-	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	87917	-	NM_001105281|FABP12|646486|fatty acid binding protein 12##EU733650|FABP12|646486|fatty acid binding protein 12##BC146973|FABP12|646486|fatty acid binding protein 12##BC146981|FABP12|646486|fatty acid binding protein 12##BT006809|FABP4|2167|fatty acid binding protein 4, adipocyte##CR456903|FABP4|2167|fatty acid binding protein 4, adipocyte##J02874|FABP4|2167|fatty acid binding protein 4, adipocyte##BC003672|FABP4|2167|fatty acid binding protein 4, adipocyte##NM_001442|FABP4|2167|fatty acid binding protein 4, adipocyte##NM_001080526|FABP9|646480|fatty acid binding protein 9, testis##AK300750|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AK312823|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AK297078|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##BC008381|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##BC009565|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AF042729|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##NM_001144878|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##NM_001144879|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##NM_005536|IMPA1|3612|inositol(myo)-1(or 4)-monophosphatase 1##AY825924|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##NM_001010893|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136625|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136631|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1	0.0	
chr14	73944396	73944576	reg1031012.p1	4.416	+	TSC_hg19_v1_chr14_-_73925284 BC068476 NM_001005743 NM_001005744 NM_001005745 NM_003744	-19195	-	TSC_hg19_v1_chr14_-_73925274 BX248781	-19219	-	BX248775 TSC_hg19_v1_chr14_-_73925232 BX647137 AF171938 AF171939 AF171940 AF171941 BX248073 AF015040 AK315130 BC020788	-19254	-	TSC_hg19_v1_chr14_+_73957638 NM_024644	13139	+	TSC_hg19_v1_chr14_+_73957669 AK299994 AK025455 BC011350	13177	+	TSC_hg19_v1_chr14_+_73957674 AY390535	13187	+	BC068476|NUMB|8650|numb homolog (Drosophila)##NM_001005743|NUMB|8650|numb homolog (Drosophila)##NM_001005744|NUMB|8650|numb homolog (Drosophila)##NM_001005745|NUMB|8650|numb homolog (Drosophila)##NM_003744|NUMB|8650|numb homolog (Drosophila)##BX248781|NUMB|8650|numb homolog (Drosophila)##BX248775|NUMB|8650|numb homolog (Drosophila)##BX647137|NUMB|8650|numb homolog (Drosophila)##AF171938|NUMB|8650|numb homolog (Drosophila)##AF171939|NUMB|8650|numb homolog (Drosophila)##AF171940|NUMB|8650|numb homolog (Drosophila)##AF171941|NUMB|8650|numb homolog (Drosophila)##BX248073|NUMB|8650|numb homolog (Drosophila)##AF015040|NUMB|8650|numb homolog (Drosophila)##AK315130|NUMB|8650|numb homolog (Drosophila)##BC020788|NUMB|8650|numb homolog (Drosophila)##NM_024644|C14orf169|79697|chromosome 14 open reading frame 169##AK299994|C14orf169|79697|chromosome 14 open reading frame 169##AK025455|C14orf169|79697|chromosome 14 open reading frame 169##BC011350|C14orf169|79697|chromosome 14 open reading frame 169##AY390535|C14orf169|79697|chromosome 14 open reading frame 169	0.0	
chr16	76299481	76299617	reg1038203.p1	4.416	+	AK307901 NM_018975 TSC_hg19_v1_chr16_+_75681715 AK000669 BC022428 BC004465 BC005841 BC016739 BC078171 AF289599 AF250393 AB464292 CU678732 AF262988	-617842	+	BC013246 CU678582 DQ892301 DQ895500 TSC_hg19_v1_chr16_-_75681564 BC004132 D31890 AF285758 AK126584 D32053 AK315687 NM_001130089 NM_005548	-617988	-	AK001687 AK314652 TSC_hg19_v1_chr16_-_75657163 BC002758 AK296834 NM_012091	-642363	-	AB051550 NM_033401 TSC_hg19_v1_chr16_+_76311298	11691	+	NM_138994 AK057327 BC017266	44206	+	TSC_hg19_v1_chr16_+_77224857 BC024277 NM_014940	925293	+	AK307901|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##NM_018975|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AK000669|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC022428|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC004465|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC005841|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC016739|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC078171|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF289599|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF250393|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##AF262988|TERF2IP|54386|telomeric repeat binding factor 2, interacting protein##BC013246|KARS|3735|lysyl-tRNA synthetase##DQ892301|KARS|3735|lysyl-tRNA synthetase##DQ895500|KARS|3735|lysyl-tRNA synthetase##BC004132|KARS|3735|lysyl-tRNA synthetase##D31890|KARS|3735|lysyl-tRNA synthetase##AF285758|KARS|3735|lysyl-tRNA synthetase##AK126584|KARS|3735|lysyl-tRNA synthetase##D32053|KARS|3735|lysyl-tRNA synthetase##AK315687|KARS|3735|lysyl-tRNA synthetase##NM_001130089|KARS|3735|lysyl-tRNA synthetase##NM_005548|KARS|3735|lysyl-tRNA synthetase##AK001687|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AK314652|ADAT1|23536|adenosine deaminase, tRNA-specific 1##BC002758|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AK296834|ADAT1|23536|adenosine deaminase, tRNA-specific 1##NM_012091|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AB051550|CNTNAP4|85445|contactin associated protein-like 4##NM_033401|CNTNAP4|85445|contactin associated protein-like 4##NM_138994|CNTNAP4|85445|contactin associated protein-like 4##AK057327|CNTNAP4|85445|contactin associated protein-like 4##BC017266|CNTNAP4|85445|contactin associated protein-like 4##BC024277|MON1B|22879|MON1 homolog B (yeast)##NM_014940|MON1B|22879|MON1 homolog B (yeast)	0.0	
chr19	50963710	50963859	reg1026574.p2	4.416	+	BC094690 NM_004533 BC130536 BC136389 X73113 HQ258536	-27600	+	AK225720 NM_001243998 NM_001243999 NM_001244000 NM_003121 TSC_hg19_v1_chr19_+_50922194 AK225225 AK292644 AK300639 EU446656 X66079 X96998 BC007921	-41580	+	NM_002691 TSC_hg19_v1_chr19_+_50887592 M80397 M81735 BC008800	-76180	+	AK131032 BC004941 TSC_hg19_v1_chr19_-_50979494 BC012203 AK125745	15725	-	BC062607 TSC_hg19_v1_chr19_+_50979762 NM_175063 NM_206538 AY761095 AY761097	15925	+	TSC_hg19_v1_chr19_+_50979781 AY358710	15992	+	NM_004533|MYBPC2|4606|myosin binding protein C, fast type##BC130536|MYBPC2|4606|myosin binding protein C, fast type##BC136389|MYBPC2|4606|myosin binding protein C, fast type##X73113|MYBPC2|4606|myosin binding protein C, fast type##HQ258536|MYBPC2|4606|myosin binding protein C, fast type##AK225720|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_001243998|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_001243999|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_001244000|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_003121|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##AK225225|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##AK292644|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##AK300639|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##EU446656|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##X66079|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##X96998|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##BC007921|SPIB|6689|Spi-B transcription factor (Spi-1/PU.1 related)##NM_002691|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##M80397|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##M81735|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##BC008800|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa##AK131032|FAM71E1|112703|family with sequence similarity 71, member E1##BC004941|FAM71E1|112703|family with sequence similarity 71, member E1##BC012203|FAM71E1|112703|family with sequence similarity 71, member E1##AK125745|FAM71E1|112703|family with sequence similarity 71, member E1##BC062607|C19orf63|284361|chromosome 19 open reading frame 63##NM_175063|C19orf63|284361|chromosome 19 open reading frame 63##NM_206538|C19orf63|284361|chromosome 19 open reading frame 63##AY761095|C19orf63|284361|chromosome 19 open reading frame 63##AY761097|C19orf63|284361|chromosome 19 open reading frame 63##AY358710|C19orf63|284361|chromosome 19 open reading frame 63	0.0156	
chr3	2240706	2240803	reg1025542.p1	4.416	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	-100193	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	-1106091	+	AK126307 TSC_hg19_v1_chr3_+_577916	-1662839	+	NM_001206955	39758	+	AK095729 TSC_hg19_v1_chr3_+_2553286	312526	+	NM_001206956 NM_175613 AK057278 AK314396 BC026119	693155	+	AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##NM_001206955|CNTN4|152330|contactin 4##AK095729|CNTN4|152330|contactin 4##NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4	0.059544	
chr5	17282620	17282721	reg1030309.p2	4.416	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-64830	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-65058	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-346285	-	AK295087 BC031051 NM_001167667 NM_004934	2705652	-	TSC_hg19_v1_chr5_+_21459621 AK290693	4176939	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	4176978	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.0	
chr8	103595765	103595945	reg1033379.p1	4.416	+	NM_024410 AK315276 BC104456 BC104457	-31994	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-170944	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-344682	-	BC011538 NM_001032282 S81439	70237	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	72077	-	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	280504	-	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1	0.010447	
chr8	59058124	59058262	reg1025739.p1	4.416	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-151036	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1151767	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1151791	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	265692	+	X56088 M93133 BC101777 BC112184 NM_000780	354514	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	407559	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.0	
chr1	218344679	218344751	reg1004002.p1	4.415	+	AY963797 AK310291 AK098591 BC014608 NM_138796 TSC_hg19_v1_chr1_+_217804714 EU832110 EU832204	-540022	+	AB527654 CU687736 BC042193 TSC_hg19_v1_chr1_-_217804402 BC063474 AK001114 AK291238 NM_018040 BC027719	-540333	-	CR749497 BX647076 NM_001134285	-1033620	-	NM_016052 TSC_hg19_v1_chr1_+_218458635	113917	+	AK290066 BC003668 TSC_hg19_v1_chr1_+_218458652 BC020641 AF151873	113954	+	NM_001135599 NM_003238 TSC_hg19_v1_chr1_+_218518677 AB209842	173996	+	AY963797|SPATA17|128153|spermatogenesis associated 17##AK310291|SPATA17|128153|spermatogenesis associated 17##AK098591|SPATA17|128153|spermatogenesis associated 17##BC014608|SPATA17|128153|spermatogenesis associated 17##NM_138796|SPATA17|128153|spermatogenesis associated 17##EU832110|SPATA17|128153|spermatogenesis associated 17##EU832204|SPATA17|128153|spermatogenesis associated 17##BC042193|GPATCH2|55105|G patch domain containing 2##BC063474|GPATCH2|55105|G patch domain containing 2##AK001114|GPATCH2|55105|G patch domain containing 2##AK291238|GPATCH2|55105|G patch domain containing 2##NM_018040|GPATCH2|55105|G patch domain containing 2##BC027719|GPATCH2|55105|G patch domain containing 2##CR749497|ESRRG|2104|estrogen-related receptor gamma##BX647076|ESRRG|2104|estrogen-related receptor gamma##NM_001134285|ESRRG|2104|estrogen-related receptor gamma##NM_016052|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AK290066|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC003668|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC020641|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AF151873|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##NM_001135599|TGFB2|7042|transforming growth factor, beta 2##NM_003238|TGFB2|7042|transforming growth factor, beta 2##AB209842|TGFB2|7042|transforming growth factor, beta 2	0.0	
chr14	25175102	25175260	reg1033577.p2	4.415	+	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-71763	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-96320	-	AB590242 CR456807 CR541704 DQ893067 DQ896320 M16117 TSC_hg19_v1_chr14_-_25045457 AK225914 BC014460 NM_001911	-129735	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	344057	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1891807	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	4061047	+	AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##CR456807|CTSG|1511|cathepsin G##CR541704|CTSG|1511|cathepsin G##DQ893067|CTSG|1511|cathepsin G##DQ896320|CTSG|1511|cathepsin G##M16117|CTSG|1511|cathepsin G##AK225914|CTSG|1511|cathepsin G##BC014460|CTSG|1511|cathepsin G##NM_001911|CTSG|1511|cathepsin G##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1	0.602404	CTCF.p2:-47:0.579
chr21	25747608	25747725	reg1030570.p1	4.415	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-3376893	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-3376976	+	TSC_hg19_v1_chr21_+_22370656 BC052946 NM_004540	-3377024	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	53402	+	TSC_hg19_v1_chr21_+_26934442 AF402776	1186806	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	1232149	-	BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##BC052946|NCAM2|4685|neural cell adhesion molecule 2##NM_004540|NCAM2|4685|neural cell adhesion molecule 2##AK124194|FLJ42200|400860|FLJ42200 protein##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39	0.957795	CTCF.p2:19:0.958
chr3	115632019	115632152	reg1029896.p2	4.415	+	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-289666	+	NM_001130064 NM_002045	-289935	+	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	-765971	-	AK315286 TSC_hg19_v1_chr3_-_116164338	532246	-	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	532288	-	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	3121448	-	AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43##BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315286|LSAMP|4045|limbic system-associated membrane protein##BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11	0.586416	CTCF.p2:30:0.586
chr4	172598009	172598190	reg1030831.p1	4.415	+	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	-1586685	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-1586901	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-1650594	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	136545	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	1491853	+	BC043556 TSC_hg19_v1_chr4_-_174090314	1492211	-	BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.0	
chr1	233576983	233577163	reg1002411.p2	4.414	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	-113490	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	-145590	-	TSC_hg19_v1_chr1_+_233086381 AF416713	-490684	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	172750	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	172846	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	463539	+	AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3	0.0	
chr16	23746660	23746771	reg1029585.p2	4.414	+	AK131280 NM_033266	-21895	-	GQ129249 GQ129250 TSC_hg19_v1_chr16_-_23724544 AK309313 AK310834 EF560720 EF560739 AB047079	-22178	-	TSC_hg19_v1_chr16_+_23690236 BC014846 AB084459 AB528397 DQ891045 DQ894224	-56465	+	AF146019 NM_022097 AK313062	19304	+	TSC_hg19_v1_chr16_+_23847303 NM_002738 NM_212535	100579	+	TSC_hg19_v1_chr16_+_23847321 BC036472	100617	+	AK131280|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##NM_033266|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##GQ129249|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##GQ129250|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AK309313|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AK310834|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##EF560720|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##EF560739|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AB047079|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##BC014846|PLK1|5347|polo-like kinase 1##AB084459|PLK1|5347|polo-like kinase 1##DQ891045|PLK1|5347|polo-like kinase 1##DQ894224|PLK1|5347|polo-like kinase 1##AF146019|CHP2|63928|calcineurin B homologous protein 2##NM_022097|CHP2|63928|calcineurin B homologous protein 2##AK313062|CHP2|63928|calcineurin B homologous protein 2##NM_002738|PRKCB|5579|protein kinase C, beta##NM_212535|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta	0.980126	CTCF.p2:-5:0.980
chr19	48269462	48269580	reg1002185.p2	4.414	+	TSC_hg19_v1_chr19_+_48248802 AK303180 AK297877 AK303918 AK309788 AK301117 AF182076 BC006311 BC013203 AY535000 CU679611 DQ892724 DQ895973 AK024486 BC013235 BC013307 BC014009 BC039869 BC007248 BC004229 AF296124 AL359336 AL359335	-20686	+	NM_015710 TSC_hg19_v1_chr19_+_48248797	-20727	+	NM_014601 TSC_hg19_v1_chr19_+_48216678 AK315548 AK074701 AK097126 AK097228 AK296907 AK298067 BC014445	-52871	+	NM_003009 TSC_hg19_v1_chr19_+_48281965 BC039597 BC032546 BC047893 BC000581 U67171 AF015283	12405	+	BC137501 BC141863 BC144673 AK097640 NM_198479	37316	-	NM_000554 DQ426868 BC016664 DQ426867 BC053672	55634	+	AK297877|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK303918|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK309788|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK301117|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF182076|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC006311|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013203|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AY535000|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ892724|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##DQ895973|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AK024486|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013235|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC013307|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC014009|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC039869|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC007248|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##BC004229|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AF296124|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359336|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##AL359335|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##NM_015710|GLTSCR2|29997|glioma tumor suppressor candidate region gene 2##NM_014601|EHD2|30846|EH-domain containing 2##AK315548|EHD2|30846|EH-domain containing 2##AK074701|EHD2|30846|EH-domain containing 2##AK097126|EHD2|30846|EH-domain containing 2##AK097228|EHD2|30846|EH-domain containing 2##AK296907|EHD2|30846|EH-domain containing 2##AK298067|EHD2|30846|EH-domain containing 2##BC014445|EHD2|30846|EH-domain containing 2##NM_003009|SEPW1|6415|selenoprotein W, 1##BC039597|SEPW1|6415|selenoprotein W, 1##BC032546|SEPW1|6415|selenoprotein W, 1##BC047893|SEPW1|6415|selenoprotein W, 1##BC000581|SEPW1|6415|selenoprotein W, 1##U67171|SEPW1|6415|selenoprotein W, 1##AF015283|SEPW1|6415|selenoprotein W, 1##BC137501|TPRX1|284355|tetra-peptide repeat homeobox 1##BC141863|TPRX1|284355|tetra-peptide repeat homeobox 1##BC144673|TPRX1|284355|tetra-peptide repeat homeobox 1##AK097640|TPRX1|284355|tetra-peptide repeat homeobox 1##NM_198479|TPRX1|284355|tetra-peptide repeat homeobox 1##NM_000554|CRX|1406|cone-rod homeobox##DQ426868|CRX|1406|cone-rod homeobox##BC016664|CRX|1406|cone-rod homeobox##DQ426867|CRX|1406|cone-rod homeobox##BC053672|CRX|1406|cone-rod homeobox	0.0	
chr19	6518204	6518379	reg1028674.p1	4.414	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-15974	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-36508	-	NM_139161 NM_174881 AK292956 AF503290 AY358684 BC018409 AK000653	-54007	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	12735	+	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	72741	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	72815	-	EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##NM_139161|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_174881|CRB3|92359|crumbs homolog 3 (Drosophila)##AK292956|CRB3|92359|crumbs homolog 3 (Drosophila)##AF503290|CRB3|92359|crumbs homolog 3 (Drosophila)##AY358684|CRB3|92359|crumbs homolog 3 (Drosophila)##BC018409|CRB3|92359|crumbs homolog 3 (Drosophila)##AK000653|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule	0.451029	CTCF.p2:4:0.451
chr3	150246375	150246551	reg1032037.p2	4.414	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	-119700	+	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	-120391	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-557383	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	17507	-	AB022427 TSC_hg19_v1_chr3_-_150264228	17718	-	BC112364 BC112365 TSC_hg19_v1_chr3_-_150264234 AL136807	17785	-	BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC012363|LOC646903|646903|uncharacterized LOC646903##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AB022427|SERP1|27230|stress-associated endoplasmic reticulum protein 1##BC112364|SERP1|27230|stress-associated endoplasmic reticulum protein 1##BC112365|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AL136807|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.829348	CTCF.p2:5:0.829
chr5	125436676	125436803	reg1031323.p1	4.414	+	BC131507 AB033107 BC151226 NM_020747	-1355951	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-2588857	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-2677595	-	NM_001146319 AK316288 AK300154	259075	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	322104	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	322448	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.014241	
chr5	98103931	98104057	reg1032849.p1	4.414	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-1585007	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-1585052	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	-1585086	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	1047	+	BC054860 BC117134 NM_001270 AF006513	158234	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	1767079	+	NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A	0.0	
chr6	37525077	37525171	reg1032671.p2	4.414	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-57428	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-57472	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-121687	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	140582	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	262166	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	262566	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.0	
chr7	56032073	56032221	reg1031068.p1	4.414	+	TSC_hg19_v1_chr7_+_56019577 AK026553 BC047445 AF077035 NM_015969 BC054031	-12566	+	AK097282 NM_182633 AB464411	-51799	+	TSC_hg19_v1_chr7_+_55955148 BC094796 BC048108	-76978	+	TSC_hg19_v1_chr7_+_56032277 NM_001202469 NM_001483 AK097049 AK315648 BC030821 AF029786 BC000732 BC001837 AJ001259 AB528140 AM392838 BT007112 CR407612 CU674374 DQ892309 DQ895508	270	+	TSC_hg19_v1_chr7_-_56101850 AK315235	69704	-	BC063614 BX537439 TSC_hg19_v1_chr7_-_56119246 AK054677 NM_004577 BC052958	87062	-	AK026553|MRPS17|51373|mitochondrial ribosomal protein S17##BC047445|MRPS17|51373|mitochondrial ribosomal protein S17##AF077035|MRPS17|51373|mitochondrial ribosomal protein S17##NM_015969|MRPS17|51373|mitochondrial ribosomal protein S17##BC054031|MRPS17|51373|mitochondrial ribosomal protein S17##AK097282|ZNF713|349075|zinc finger protein 713##NM_182633|ZNF713|349075|zinc finger protein 713##BC094796|ZNF713|349075|zinc finger protein 713##NM_001202469|GBAS|2631|glioblastoma amplified sequence##NM_001483|GBAS|2631|glioblastoma amplified sequence##AK097049|GBAS|2631|glioblastoma amplified sequence##AK315648|GBAS|2631|glioblastoma amplified sequence##BC030821|GBAS|2631|glioblastoma amplified sequence##AF029786|GBAS|2631|glioblastoma amplified sequence##BC000732|GBAS|2631|glioblastoma amplified sequence##BC001837|GBAS|2631|glioblastoma amplified sequence##AJ001259|GBAS|2631|glioblastoma amplified sequence##AM392838|GBAS|2631|glioblastoma amplified sequence##BT007112|GBAS|2631|glioblastoma amplified sequence##CR407612|GBAS|2631|glioblastoma amplified sequence##DQ892309|GBAS|2631|glioblastoma amplified sequence##DQ895508|GBAS|2631|glioblastoma amplified sequence##AK315235|PSPH|5723|phosphoserine phosphatase##BC063614|PSPH|5723|phosphoserine phosphatase##BX537439|PSPH|5723|phosphoserine phosphatase##AK054677|PSPH|5723|phosphoserine phosphatase##NM_004577|PSPH|5723|phosphoserine phosphatase##BC052958|PSPH|5723|phosphoserine phosphatase	0.911877	CTCF.p2:41:0.912
chr10	52216478	52216659	reg1031542.p1	4.413	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-208228	-	NM_018232	-378683	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-388846	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	167135	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	283142	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	428825	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.0	
chr1	247473357	247473455	reg1039195.p2	4.413	+	BC126341 BC126367 NM_173858	-54083	+	BC032514 BC096349 BC096350 BC096351 BC099661 BC013605 AK054647 NM_001243740 NM_003431	-138122	-	TSC_hg19_v1_chr1_-_247275541 AK127619 NM_207401	-197784	-	TSC_hg19_v1_chr1_-_247494994 BC007263 NM_032752	21611	-	AK314998 NM_001079821 NM_001127461 TSC_hg19_v1_chr1_+_247579474 AB208891	106063	+	AF410477 AF427617 NM_001127462 NM_001243133 NM_004895 NM_183395	107944	+	BC126341|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC126367|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##NM_173858|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC032514|ZNF124|7678|zinc finger protein 124##BC096349|ZNF124|7678|zinc finger protein 124##BC096350|ZNF124|7678|zinc finger protein 124##BC096351|ZNF124|7678|zinc finger protein 124##BC099661|ZNF124|7678|zinc finger protein 124##BC013605|ZNF124|7678|zinc finger protein 124##AK054647|ZNF124|7678|zinc finger protein 124##NM_001243740|ZNF124|7678|zinc finger protein 124##NM_003431|ZNF124|7678|zinc finger protein 124##AK127619|C1orf229|388759|chromosome 1 open reading frame 229##NM_207401|C1orf229|388759|chromosome 1 open reading frame 229##BC007263|ZNF496|84838|zinc finger protein 496##NM_032752|ZNF496|84838|zinc finger protein 496##AK314998|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001079821|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127461|NLRP3|114548|NLR family, pyrin domain containing 3##AB208891|NLRP3|114548|NLR family, pyrin domain containing 3##AF410477|NLRP3|114548|NLR family, pyrin domain containing 3##AF427617|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127462|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001243133|NLRP3|114548|NLR family, pyrin domain containing 3##NM_004895|NLRP3|114548|NLR family, pyrin domain containing 3##NM_183395|NLRP3|114548|NLR family, pyrin domain containing 3	0.0	
chr15	31684409	31684589	reg1027598.p1	4.413	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-65161	+	NM_001243538	-161450	-	GQ502181 HM135791 NM_001252020	-231071	-	AJ430383 NM_130901	263042	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	478330	-	TSC_hg19_v1_chr15_-_32162898 AK126002	478444	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr15	63449742	63449848	reg1029023.p2	4.413	+	BC031307 TSC_hg19_v1_chr15_-_63449677 AF070668 BC003667 BC047648 AK024591 NM_015920	-186	-	TSC_hg19_v1_chr15_+_63414037 AY358709 BC037198	-35742	+	NM_032857 NM_171846 BC067288 TSC_hg19_v1_chr15_+_63414026 AK027808	-35779	+	TSC_hg19_v1_chr15_+_63481724 NM_016530 AB038995	31934	+	TSC_hg19_v1_chr15_+_63481804 AK001111 AK095444 AK297598 AL833365 BC020654 AB464123 CU676608	32010	+	NM_001145646 NM_031301 TSC_hg19_v1_chr15_+_63569803 AK291204 AL136671 BC020905 AB189172 AB197122 AF508794 AX776001 AY358698 AB528062 AM392724 AM392878 DQ891401 CU676772 AK307725	120018	+	BC031307|RPS27L|51065|ribosomal protein S27-like##AF070668|RPS27L|51065|ribosomal protein S27-like##BC003667|RPS27L|51065|ribosomal protein S27-like##BC047648|RPS27L|51065|ribosomal protein S27-like##AK024591|RPS27L|51065|ribosomal protein S27-like##NM_015920|RPS27L|51065|ribosomal protein S27-like##AY358709|LACTB|114294|lactamase, beta##BC037198|LACTB|114294|lactamase, beta##NM_032857|LACTB|114294|lactamase, beta##NM_171846|LACTB|114294|lactamase, beta##BC067288|LACTB|114294|lactamase, beta##AK027808|LACTB|114294|lactamase, beta##NM_016530|RAB8B|51762|RAB8B, member RAS oncogene family##AB038995|RAB8B|51762|RAB8B, member RAS oncogene family##AK001111|RAB8B|51762|RAB8B, member RAS oncogene family##AK095444|RAB8B|51762|RAB8B, member RAS oncogene family##AK297598|RAB8B|51762|RAB8B, member RAS oncogene family##AL833365|RAB8B|51762|RAB8B, member RAS oncogene family##BC020654|RAB8B|51762|RAB8B, member RAS oncogene family##NM_001145646|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##NM_031301|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK291204|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AL136671|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##BC020905|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB189172|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB197122|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AF508794|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AY358698|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392724|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392878|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##DQ891401|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK307725|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)	0.0	
chr1	6298834	6298951	reg1032786.p2	4.413	+	TSC_hg19_v1_chr1_-_6296121 NM_012405	-2784	-	TSC_hg19_v1_chr1_-_6295993 BC028168 AF064084 AK092890 BC017037	-2882	-	TSC_hg19_v1_chr1_-_6295985 CR541671 CR541711 AB590586	-2915	-	NM_001024598	5359	+	BC068275 NM_207370 TSC_hg19_v1_chr1_-_6321125	22191	-	AB074419 AK291583 NM_181866	120092	-	NM_012405|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##BC028168|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##AF064084|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##AK092890|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##BC017037|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##CR541671|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##CR541711|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##NM_001024598|HES3|390992|hairy and enhancer of split 3 (Drosophila)##BC068275|GPR153|387509|G protein-coupled receptor 153##NM_207370|GPR153|387509|G protein-coupled receptor 153##AB074419|ACOT7|11332|acyl-CoA thioesterase 7##AK291583|ACOT7|11332|acyl-CoA thioesterase 7##NM_181866|ACOT7|11332|acyl-CoA thioesterase 7	0.999483	CTCF.p2:-12:0.999
chr2	209648027	209648172	reg1029867.p2	4.413	+	BC036811 NM_005048 U25128 HQ257935 AY497546	-376438	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-423474	+	TSC_hg19_v1_chr2_+_209131083 AK127769	-517016	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	640655	+	BC110423 TSC_hg19_v1_chr2_+_210444185	796071	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	796295	+	BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##AK294181|PTH2R|5746|parathyroid hormone 2 receptor##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC110423|MAP2|4133|microtubule-associated protein 2##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2	0.878159	CTCF.p2:6:0.878
chr3	47323701	47323881	reg1020845.p2	4.413	+	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	-118352	-	TSC_hg19_v1_chr3_-_47098906 AK026837	-224848	-	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	-294321	+	BC015311 NM_001134878 NM_022342 NM_182902	504	-	NM_025010 TSC_hg19_v1_chr3_+_47324433 AK023765 AK291477 AK295292 BX537953 BC015962 AB527175 AM393269 AM393767 BC032620	637	+	AB040904 NM_015466 TSC_hg19_v1_chr3_+_47422510 AK055157 AK299906 AK295888 AK289502 AB025194 AF290614 AK295877 BC089042	98741	+	AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2##AK026837|SETD2|29072|SET domain containing 2##AK092871|NBEAL2|23218|neurobeachin-like 2##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9##NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)##AK023765|KLHL18|23276|kelch-like 18 (Drosophila)##AK291477|KLHL18|23276|kelch-like 18 (Drosophila)##AK295292|KLHL18|23276|kelch-like 18 (Drosophila)##BX537953|KLHL18|23276|kelch-like 18 (Drosophila)##BC015962|KLHL18|23276|kelch-like 18 (Drosophila)##AM393269|KLHL18|23276|kelch-like 18 (Drosophila)##AM393767|KLHL18|23276|kelch-like 18 (Drosophila)##BC032620|KLHL18|23276|kelch-like 18 (Drosophila)##AB040904|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_015466|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK055157|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK299906|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295888|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK289502|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AB025194|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AF290614|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295877|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##BC089042|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23	0.0	
chr9	139439477	139439658	reg1031756.p2	4.413	+	TSC_hg19_v1_chr9_-_139378220 AB593115	-61325	-	BC036221 NM_152571 AK055336	-61597	+	TSC_hg19_v1_chr9_-_139377505 AB002308 NM_014866	-62063	-	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	683	-	NM_016215 AL512735 AY358903 BC088371 AY358902	117834	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	120648	+	AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##AB002308|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##NM_014866|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7	0.0	
chrX	55946494	55946606	reg1029290.p2	4.413	+	TSC_hg19_v1_chrX_+_55744181 NM_006064 NM_016656 AL831926 AK289407 BC034726 X90530	-202362	+	BC012934 NM_198451	-296718	+	NM_201286 BC035907	-430918	-	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	312360	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	643501	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	809141	+	NM_006064|RRAGB|10325|Ras-related GTP binding B##NM_016656|RRAGB|10325|Ras-related GTP binding B##AL831926|RRAGB|10325|Ras-related GTP binding B##AK289407|RRAGB|10325|Ras-related GTP binding B##BC034726|RRAGB|10325|Ras-related GTP binding B##X90530|RRAGB|10325|Ras-related GTP binding B##BC012934|FOXR2|139628|forkhead box R2##NM_198451|FOXR2|139628|forkhead box R2##NM_201286|USP51|158880|ubiquitin specific peptidase 51##BC035907|USP51|158880|ubiquitin specific peptidase 51##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643	0.367825	CTCF.p2:23:0.368
chr13	111333305	111333393	reg1024675.p1	4.412	+	TSC_hg19_v1_chr13_-_111268694 AK095260	-64651	-	TSC_hg19_v1_chr13_+_111267898 AK093771 AK298917 AX748297 AK302117 AK057767 AK296758 NM_001242881 NM_018210 AK296227 AK024260 BC041028 AK001631 AK225129	-65307	+	TSC_hg19_v1_chr13_+_111267870 NM_001242882 NM_001242883	-65519	+	TSC_hg19_v1_chr13_-_111358444 AB062436	25089	-	TSC_hg19_v1_chr13_-_111358447 BC007220	25099	-	TSC_hg19_v1_chr13_-_111358460 AK022180 NM_024537	25118	-	AK093771|CARKD|55739|carbohydrate kinase domain containing##AK298917|CARKD|55739|carbohydrate kinase domain containing##AK302117|CARKD|55739|carbohydrate kinase domain containing##AK057767|CARKD|55739|carbohydrate kinase domain containing##AK296758|CARKD|55739|carbohydrate kinase domain containing##NM_001242881|CARKD|55739|carbohydrate kinase domain containing##NM_018210|CARKD|55739|carbohydrate kinase domain containing##AK296227|CARKD|55739|carbohydrate kinase domain containing##AK024260|CARKD|55739|carbohydrate kinase domain containing##BC041028|CARKD|55739|carbohydrate kinase domain containing##AK001631|CARKD|55739|carbohydrate kinase domain containing##AK225129|CARKD|55739|carbohydrate kinase domain containing##NM_001242882|CARKD|55739|carbohydrate kinase domain containing##NM_001242883|CARKD|55739|carbohydrate kinase domain containing##AB062436|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##BC007220|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##AK022180|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##NM_024537|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)	0.835024	CTCF.p2:15:0.835
chr14	100706742	100706833	reg1031338.p1	4.412	+	TSC_hg19_v1_chr14_+_100705474 BC037308 M76541 BC020324 BC065366 AB464361 DQ891638 EU176600 CU691478	-1281	+	TSC_hg19_v1_chr14_+_100705309 M77698	-1475	+	NM_003403 TSC_hg19_v1_chr14_+_100705177	-1645	+	TSC_hg19_v1_chr14_-_100772779 AK096294 AK123821 AK310069 BC142945 AK172788 BX247983 NM_001039355	66052	-	AK092001 AX747302 TSC_hg19_v1_chr14_+_100789675 AB073385 AY569438 AY570298 NM_207117 BX248260 BC137253 BC137254 BC144549	82899	+	X59892 TSC_hg19_v1_chr14_-_100841685 BC095453 M61715	134904	-	BC037308|YY1|7528|YY1 transcription factor##M76541|YY1|7528|YY1 transcription factor##BC020324|YY1|7528|YY1 transcription factor##BC065366|YY1|7528|YY1 transcription factor##DQ891638|YY1|7528|YY1 transcription factor##EU176600|YY1|7528|YY1 transcription factor##M77698|YY1|7528|YY1 transcription factor##NM_003403|YY1|7528|YY1 transcription factor##AK096294|SLC25A29|123096|solute carrier family 25, member 29##AK123821|SLC25A29|123096|solute carrier family 25, member 29##AK310069|SLC25A29|123096|solute carrier family 25, member 29##AK172788|SLC25A29|123096|solute carrier family 25, member 29##BX247983|SLC25A29|123096|solute carrier family 25, member 29##NM_001039355|SLC25A29|123096|solute carrier family 25, member 29##AK092001|SLC25A47|283600|solute carrier family 25, member 47##AB073385|SLC25A47|283600|solute carrier family 25, member 47##AY569438|SLC25A47|283600|solute carrier family 25, member 47##AY570298|SLC25A47|283600|solute carrier family 25, member 47##NM_207117|SLC25A47|283600|solute carrier family 25, member 47##BX248260|SLC25A47|283600|solute carrier family 25, member 47##BC137253|SLC25A47|283600|solute carrier family 25, member 47##BC137254|SLC25A47|283600|solute carrier family 25, member 47##BC144549|SLC25A47|283600|solute carrier family 25, member 47##X59892|WARS|7453|tryptophanyl-tRNA synthetase##BC095453|WARS|7453|tryptophanyl-tRNA synthetase##M61715|WARS|7453|tryptophanyl-tRNA synthetase	0.853673	CTCF.p2:-20:0.854
chr2	178501513	178501612	reg1029919.p1	4.412	+	AK292395 BC042848 NM_152275	-17877	-	TSC_hg19_v1_chr2_-_178483463 CU692122 AK057530 AK125104 BC048006	-18134	-	TSC_hg19_v1_chr2_-_178417525 AK296828 AK055552 BC033795 NM_152517	-84077	-	AJ251509 NM_001077196	251902	-	AF281865 NM_001077358	285980	-	BC112393 BC114431 AB036704 NM_016953 TSC_hg19_v1_chr2_-_178937505 AK309155	435946	-	AK292395|TTC30A|92104|tetratricopeptide repeat domain 30A##BC042848|TTC30A|92104|tetratricopeptide repeat domain 30A##NM_152275|TTC30A|92104|tetratricopeptide repeat domain 30A##AK057530|TTC30A|92104|tetratricopeptide repeat domain 30A##AK125104|TTC30A|92104|tetratricopeptide repeat domain 30A##BC048006|TTC30A|92104|tetratricopeptide repeat domain 30A##AK296828|TTC30B|150737|tetratricopeptide repeat domain 30B##AK055552|TTC30B|150737|tetratricopeptide repeat domain 30B##BC033795|TTC30B|150737|tetratricopeptide repeat domain 30B##NM_152517|TTC30B|150737|tetratricopeptide repeat domain 30B##AJ251509|PDE11A|50940|phosphodiesterase 11A##NM_001077196|PDE11A|50940|phosphodiesterase 11A##AF281865|PDE11A|50940|phosphodiesterase 11A##NM_001077358|PDE11A|50940|phosphodiesterase 11A##BC112393|PDE11A|50940|phosphodiesterase 11A##BC114431|PDE11A|50940|phosphodiesterase 11A##AB036704|PDE11A|50940|phosphodiesterase 11A##NM_016953|PDE11A|50940|phosphodiesterase 11A	0.01334	
chr22	42692704	42692799	reg1030920.p1	4.412	+	AB527391 NM_005650 NM_181492	-81374	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	-165870	-	AB463001 CU013213 CU013501 M20403 X08006 BC066877 BC067432 TSC_hg19_v1_chr22_-_42526809 BC106757 BC106758 BC126858 CR456430 BC075023 BC075024	-165944	-	BC038245 TSC_hg19_v1_chr22_-_42765218	72451	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	135630	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	223016	-	NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013213|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013501|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##M20403|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##X08006|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC066877|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC067432|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106757|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106758|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC126858|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CR456430|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075023|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075024|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)	0.565103	CTCF.p2:-7:0.565
chr6	3435047	3435156	reg1032771.p1	4.412	+	TSC_hg19_v1_chr6_-_3272352 BC090851 BC022217	-162671	-	TSC_hg19_v1_chr6_+_3259232 AK126623 AK095683	-175862	+	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	-175943	+	BC128580 BC128581 BC038748 NM_021945	10106	-	TSC_hg19_v1_chr6_-_3456513 AL110245	21413	-	BC040876 NM_015482	21662	-	BC090851|SLC22A23|63027|solute carrier family 22, member 23##BC022217|SLC22A23|63027|solute carrier family 22, member 23##AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##BC128580|SLC22A23|63027|solute carrier family 22, member 23##BC128581|SLC22A23|63027|solute carrier family 22, member 23##BC038748|SLC22A23|63027|solute carrier family 22, member 23##NM_021945|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23	0.0	
chr9	132814207	132814383	reg1031613.p1	4.412	+	TSC_hg19_v1_chr9_-_132805496 NM_015033	-8807	-	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	-8941	-	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-216530	+	BC039728 NM_001136557 NM_001136558 NM_020960	1689	+	TSC_hg19_v1_chr9_+_132816196 BC143655	1896	+	TSC_hg19_v1_chr9_+_132816199 AK026244 AK225456 BC030147 AF376725 AX776003 BC110518 AK293092 AB385490 AB046844	1921	+	NM_015033|FNBP1|23048|formin binding protein 1##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107##BC143655|GPR107|57720|G protein-coupled receptor 107##AK026244|GPR107|57720|G protein-coupled receptor 107##AK225456|GPR107|57720|G protein-coupled receptor 107##BC030147|GPR107|57720|G protein-coupled receptor 107##AF376725|GPR107|57720|G protein-coupled receptor 107##BC110518|GPR107|57720|G protein-coupled receptor 107##AK293092|GPR107|57720|G protein-coupled receptor 107##AB046844|GPR107|57720|G protein-coupled receptor 107	0.0	
chr9	2016766	2016878	reg1033357.p2	4.412	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-1526	+	AF130729 NM_181872	-966213	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-966452	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	604985	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	605252	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	605290	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.0	
chr9	74980009	74980101	reg1031827.p1	4.412	+	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	-330	-	TSC_hg19_v1_chr9_+_74920350 AK095210	-59704	+	TSC_hg19_v1_chr9_+_74764417 CU690994 AK315988	-215603	+	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	45	-	AF417578 NM_138691	156661	+	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	587890	-	AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AK315988|GDA|9615|guanine deaminase##AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5##AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	0.071741	
chrX	57609515	57609623	reg1033165.p2	4.412	+	NM_174912 AK055766 BC073922 TSC_hg19_v1_chrX_+_57313185 CU687272 EU285560 BC048279	-296354	+	BC071694 NM_019003	-445512	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	-461641	-	NM_007157	8699	+	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	8891	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	327390	-	NM_174912|FAAH2|158584|fatty acid amide hydrolase 2##AK055766|FAAH2|158584|fatty acid amide hydrolase 2##BC073922|FAAH2|158584|fatty acid amide hydrolase 2##EU285560|FAAH2|158584|fatty acid amide hydrolase 2##BC048279|FAAH2|158584|fatty acid amide hydrolase 2##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A	0.999674	CTCF.p2:-6:1.000
chr1	229539597	229539695	reg1031494.p2	4.411	+	NM_145257 BC071609 TSC_hg19_v1_chr1_-_229478768	-60914	-	BC015419 TSC_hg19_v1_chr1_-_229478279 BC039241	-61347	-	AB590449 TSC_hg19_v1_chr1_-_229478238 AK291437	-61415	-	TSC_hg19_v1_chr1_-_229569842 AK096902 AK300697 BC012597 BX648545 J00068 NM_001100	30196	-	AB384686 DQ894268 EU176236 AK092339 AK314431 AX747487 TSC_hg19_v1_chr1_-_229644075 BC020107 AK304861	104389	-	TSC_hg19_v1_chr1_-_229644079 AK001676 NM_018230 AK304061	104454	-	NM_145257|C1orf96|126731|chromosome 1 open reading frame 96##BC071609|C1orf96|126731|chromosome 1 open reading frame 96##BC015419|C1orf96|126731|chromosome 1 open reading frame 96##BC039241|C1orf96|126731|chromosome 1 open reading frame 96##AK291437|C1orf96|126731|chromosome 1 open reading frame 96##AK096902|ACTA1|58|actin, alpha 1, skeletal muscle##AK300697|ACTA1|58|actin, alpha 1, skeletal muscle##BC012597|ACTA1|58|actin, alpha 1, skeletal muscle##BX648545|ACTA1|58|actin, alpha 1, skeletal muscle##J00068|ACTA1|58|actin, alpha 1, skeletal muscle##NM_001100|ACTA1|58|actin, alpha 1, skeletal muscle##DQ894268|NUP133|55746|nucleoporin 133kDa##EU176236|NUP133|55746|nucleoporin 133kDa##AK092339|NUP133|55746|nucleoporin 133kDa##AK314431|NUP133|55746|nucleoporin 133kDa##BC020107|NUP133|55746|nucleoporin 133kDa##AK304861|NUP133|55746|nucleoporin 133kDa##AK001676|NUP133|55746|nucleoporin 133kDa##NM_018230|NUP133|55746|nucleoporin 133kDa##AK304061|NUP133|55746|nucleoporin 133kDa	0.29794	CTCF.p2:82:0.298
chr15	70392181	70392281	reg1033323.p2	4.411	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-1988	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-2004	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-50322	-	TSC_hg19_v1_chr15_-_70878946 BC040579	486713	-	BC016881 AL834243 NM_001008224 AK055435	602396	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	663611	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.0	
chr17	1933354	1933533	reg1018488.p1	4.411	+	TSC_hg19_v1_chr17_+_1933446 S81752 U34880 AF321876 NM_001383 AK314015 BC096086 BC096087 BC096088 BC096089 BC003099	-22	+	BC128608 NM_178568	-5266	-	TSC_hg19_v1_chr17_+_1733335 M63488 AB209732 BC018126 AB385027 HQ258560	-200094	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	11865	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	24955	+	DQ187313 NM_001098202	26114	+	S81752|DPH1|1801|DPH1 homolog (S. cerevisiae)##U34880|DPH1|1801|DPH1 homolog (S. cerevisiae)##AF321876|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_001383|DPH1|1801|DPH1 homolog (S. cerevisiae)##AK314015|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096086|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096087|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096088|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096089|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC003099|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC128608|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_178568|RTN4RL1|146760|reticulon 4 receptor-like 1##M63488|RPA1|6117|replication protein A1, 70kDa##AB209732|RPA1|6117|replication protein A1, 70kDa##BC018126|RPA1|6117|replication protein A1, 70kDa##HQ258560|RPA1|6117|replication protein A1, 70kDa##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1	0.0	
chr2	153046678	153046753	reg1005441.p2	4.411	+	TSC_hg19_v1_chr2_-_153032266 AB463258 AM393419 CU688564 DQ892427 DQ895641 AK292265 AK292847 AK310863 AF042273 AF042274 AL133600 BC022277 BC028740 NM_005843	-14365	-	TSC_hg19_v1_chr2_-_152955813 AK291378	-90904	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	-91168	-	TSC_hg19_v1_chr2_+_153191687 NM_052905	144955	+	BC113878 BC114438 TSC_hg19_v1_chr2_+_153191857 AB067489 BC167159 AB385514	145258	+	TSC_hg19_v1_chr2_-_153573924 U70667 AF049524 AF049528 BC000273 BC073138 BC011788 AF049523 AK298547 AK024810 BC029414 NM_017892	527205	-	AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK291378|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_052905|FMNL2|114793|formin-like 2##BC113878|FMNL2|114793|formin-like 2##BC114438|FMNL2|114793|formin-like 2##AB067489|FMNL2|114793|formin-like 2##BC167159|FMNL2|114793|formin-like 2##U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)	0.0	
chr2	38953143	38953215	reg1003236.p1	4.411	+	BC019263 TSC_hg19_v1_chr2_+_38893258 AK291489 U11036 BC014916	-59924	+	NM_138801 TSC_hg19_v1_chr2_+_38893054	-60127	+	AK000155 TSC_hg19_v1_chr2_-_38830104 AK292259 NM_001142650 NM_138394	-123038	-	AB445102 BT006745 AB527733 AK091425 AX746975 AY513287 AF055270 BC000997 BC017369 BC017908 BC022328 TSC_hg19_v1_chr2_-_38978504 AK225141 AK293667 AK297161 L22253 AY166860 NM_001031684 NM_001195446	25337	-	NM_024775 AK315627 TSC_hg19_v1_chr2_+_39005351 AK027112 BC018195	52176	+	BC131534 BC060778 NM_198963 AK307514 AK296739 BC153875	149849	-	BC019263|GALM|130589|galactose mutarotase (aldose 1-epimerase)##AK291489|GALM|130589|galactose mutarotase (aldose 1-epimerase)##U11036|GALM|130589|galactose mutarotase (aldose 1-epimerase)##BC014916|GALM|130589|galactose mutarotase (aldose 1-epimerase)##NM_138801|GALM|130589|galactose mutarotase (aldose 1-epimerase)##AK000155|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AK292259|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##NM_001142650|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##NM_138394|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AB445102|SRSF7|6432|serine/arginine-rich splicing factor 7##BT006745|SRSF7|6432|serine/arginine-rich splicing factor 7##AK091425|SRSF7|6432|serine/arginine-rich splicing factor 7##AY513287|SRSF7|6432|serine/arginine-rich splicing factor 7##AF055270|SRSF7|6432|serine/arginine-rich splicing factor 7##BC000997|SRSF7|6432|serine/arginine-rich splicing factor 7##BC017369|SRSF7|6432|serine/arginine-rich splicing factor 7##BC017908|SRSF7|6432|serine/arginine-rich splicing factor 7##BC022328|SRSF7|6432|serine/arginine-rich splicing factor 7##AK225141|SRSF7|6432|serine/arginine-rich splicing factor 7##AK293667|SRSF7|6432|serine/arginine-rich splicing factor 7##AK297161|SRSF7|6432|serine/arginine-rich splicing factor 7##L22253|SRSF7|6432|serine/arginine-rich splicing factor 7##AY166860|SRSF7|6432|serine/arginine-rich splicing factor 7##NM_001031684|SRSF7|6432|serine/arginine-rich splicing factor 7##NM_001195446|SRSF7|6432|serine/arginine-rich splicing factor 7##NM_024775|GEMIN6|79833|gem (nuclear organelle) associated protein 6##AK315627|GEMIN6|79833|gem (nuclear organelle) associated protein 6##AK027112|GEMIN6|79833|gem (nuclear organelle) associated protein 6##BC018195|GEMIN6|79833|gem (nuclear organelle) associated protein 6##BC131534|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##BC060778|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##NM_198963|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##AK307514|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##AK296739|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##BC153875|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	0.0	
chr4	1858067	1858247	reg1030030.p1	4.411	+	DQ893606 AK293572 TSC_hg19_v1_chr4_-_1857827 BC014500 BC021208 AF061025 NM_012318	-326	-	TSC_hg19_v1_chr4_+_1795019 AB209441 NM_000142 NM_001163213 NM_022965	-63131	+	TSC_hg19_v1_chr4_+_1723248 AK302463 AK225631 BC106071 AF093543 AF479620 AJ243997 BC111771	-134889	+	AK289697 TSC_hg19_v1_chr4_+_1873132 NM_001042424	14927	+	TSC_hg19_v1_chr4_+_1873169 BC052254 BC020545 BC032731	15041	+	AF083386 AF083387 AF083388 AF083389 AF083390 AF083391 NM_007331 NM_133330 NM_133331 NM_133335	36351	+	DQ893606|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK293572|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC014500|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC021208|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AF061025|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##NM_012318|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AB209441|FGFR3|2261|fibroblast growth factor receptor 3##NM_000142|FGFR3|2261|fibroblast growth factor receptor 3##NM_001163213|FGFR3|2261|fibroblast growth factor receptor 3##NM_022965|FGFR3|2261|fibroblast growth factor receptor 3##AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AK289697|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_001042424|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083386|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083387|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083388|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083389|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083390|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083391|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_007331|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133330|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133331|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133335|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	0.0	
chr9	71564645	71564737	reg1022943.p2	4.411	+	CU680482 TSC_hg19_v1_chr9_+_71395147	-169575	+	TSC_hg19_v1_chr9_+_71394980 NM_138333 BC013062 AK126379 AK304099	-169740	+	TSC_hg19_v1_chr9_+_71320206 AK295587 AK292734 NM_003558	-244315	+	TSC_hg19_v1_chr9_-_71590760 AK057188	26067	-	DQ890764 DQ893927 AB463461 BC039888 NM_002732	64332	-	NM_000144 NM_001161706 NM_181425	85787	+	NM_138333|FAM122A|116224|family with sequence similarity 122A##BC013062|FAM122A|116224|family with sequence similarity 122A##AK126379|FAM122A|116224|family with sequence similarity 122A##AK295587|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##AK292734|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_003558|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##DQ890764|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##DQ893927|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##BC039888|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_002732|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_000144|FXN|2395|frataxin##NM_001161706|FXN|2395|frataxin##NM_181425|FXN|2395|frataxin	0.023926	
chr10	115683089	115683185	reg1017257.p2	4.410	+	TSC_hg19_v1_chr10_+_115614419 NM_198514 AK090631 AX746547	-68718	+	D42045 NM_014881 AK307187	-69221	-	BC037870 FJ236306 NM_182601	-158560	+	NM_000684 J03019	120672	+	TSC_hg19_v1_chr10_-_115933963 BC100670 BC103499 BC103504 BC105632 BC152306 BC107430 BC070368 BX537964 AK307517 AK092620 AX747632 BC020842 BC030557	250795	-	NM_018017	251226	-	NM_198514|NHLRC2|374354|NHL repeat containing 2##AK090631|NHLRC2|374354|NHL repeat containing 2##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A##BC037870|C10orf81|79949|chromosome 10 open reading frame 81##FJ236306|C10orf81|79949|chromosome 10 open reading frame 81##NM_182601|C10orf81|79949|chromosome 10 open reading frame 81##NM_000684|ADRB1|153|adrenergic, beta-1-, receptor##J03019|ADRB1|153|adrenergic, beta-1-, receptor##BC100670|C10orf118|55088|chromosome 10 open reading frame 118##BC103499|C10orf118|55088|chromosome 10 open reading frame 118##BC103504|C10orf118|55088|chromosome 10 open reading frame 118##BC105632|C10orf118|55088|chromosome 10 open reading frame 118##BC152306|C10orf118|55088|chromosome 10 open reading frame 118##BC107430|C10orf118|55088|chromosome 10 open reading frame 118##BC070368|C10orf118|55088|chromosome 10 open reading frame 118##BX537964|C10orf118|55088|chromosome 10 open reading frame 118##AK307517|C10orf118|55088|chromosome 10 open reading frame 118##AK092620|C10orf118|55088|chromosome 10 open reading frame 118##BC020842|C10orf118|55088|chromosome 10 open reading frame 118##BC030557|C10orf118|55088|chromosome 10 open reading frame 118##NM_018017|C10orf118|55088|chromosome 10 open reading frame 118	0.160073	
chr11	9636835	9636966	reg1030973.p2	4.410	+	AK122837 NM_001143976	-40667	+	TSC_hg19_v1_chr11_+_9595453 AB384747 EU832325 EU832410	-41433	+	BC051831 TSC_hg19_v1_chr11_+_9595437	-41467	+	TSC_hg19_v1_chr11_+_9685623 AK096859	48714	+	TSC_hg19_v1_chr11_+_9685627 NM_015055	48736	+	BC000616 TSC_hg19_v1_chr11_+_9685651 AF134894	48751	+	AK122837|WEE1|7465|WEE1 homolog (S. pombe)##NM_001143976|WEE1|7465|WEE1 homolog (S. pombe)##EU832325|WEE1|7465|WEE1 homolog (S. pombe)##EU832410|WEE1|7465|WEE1 homolog (S. pombe)##BC051831|WEE1|7465|WEE1 homolog (S. pombe)##AK096859|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##NM_015055|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000616|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF134894|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit	0.0	
chr14	79314729	79314822	reg1032001.p1	4.410	+	AB018286 BC152457 NM_004796	-444683	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-1048325	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-1087266	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	430929	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	1363129	-	AK292210 NM_000793	1382621	-	AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	0.021603	
chr15	72634860	72634986	reg1032602.p2	4.410	+	TSC_hg19_v1_chr15_-_72612498 NM_052840	-22413	-	AF401233 TSC_hg19_v1_chr15_-_72612478	-22449	-	TSC_hg19_v1_chr15_-_72612248 AF425606 AK308073 NM_001172684	-22657	-	AK296528 M13520 TSC_hg19_v1_chr15_-_72668295	33319	-	TSC_hg19_v1_chr15_-_72668335 AK297678 CU676336 DQ892696 EU176728 BC084537 AB209434 BC018927 AK222502 AK301000 AK307770 AK301138 AK310154 NM_000520	33487	-	TSC_hg19_v1_chr15_-_72668762 CR627386	33887	-	NM_052840|CELF6|60677|CUGBP, Elav-like family member 6##AF401233|CELF6|60677|CUGBP, Elav-like family member 6##AF425606|CELF6|60677|CUGBP, Elav-like family member 6##NM_001172684|CELF6|60677|CUGBP, Elav-like family member 6##AK296528|HEXA|3073|hexosaminidase A (alpha polypeptide)##M13520|HEXA|3073|hexosaminidase A (alpha polypeptide)##AK297678|HEXA|3073|hexosaminidase A (alpha polypeptide)##DQ892696|HEXA|3073|hexosaminidase A (alpha polypeptide)##EU176728|HEXA|3073|hexosaminidase A (alpha polypeptide)##BC084537|HEXA|3073|hexosaminidase A (alpha polypeptide)##BC018927|HEXA|3073|hexosaminidase A (alpha polypeptide)##AK222502|HEXA|3073|hexosaminidase A (alpha polypeptide)##AK301000|HEXA|3073|hexosaminidase A (alpha polypeptide)##AK307770|HEXA|3073|hexosaminidase A (alpha polypeptide)##AK301138|HEXA|3073|hexosaminidase A (alpha polypeptide)##AK310154|HEXA|3073|hexosaminidase A (alpha polypeptide)##NM_000520|HEXA|3073|hexosaminidase A (alpha polypeptide)##CR627386|HEXA|3073|hexosaminidase A (alpha polypeptide)	0.9351	CTCF.p2:5:0.935
chr15	94540425	94540531	reg1029240.p1	4.410	+	AB463222 AM392685 BC146682 AK074980 BC140838 BC151132 AL136826 TSC_hg19_v1_chr15_-_93632430 AK074910 AK291365 NM_020211	-908125	-	NM_001166287	-908727	-	AK299363 NM_001166283	-923325	-	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	234380	+	NM_001159643 NM_018349 AY656717 BC131527	300983	+	NM_001159644 BC025708 BC111024 AK002037	358831	+	AM392685|RGMA|56963|RGM domain family, member A##BC146682|RGMA|56963|RGM domain family, member A##AK074980|RGMA|56963|RGM domain family, member A##BC140838|RGMA|56963|RGM domain family, member A##BC151132|RGMA|56963|RGM domain family, member A##AL136826|RGMA|56963|RGM domain family, member A##AK074910|RGMA|56963|RGM domain family, member A##NM_020211|RGMA|56963|RGM domain family, member A##NM_001166287|RGMA|56963|RGM domain family, member A##AK299363|RGMA|56963|RGM domain family, member A##NM_001166283|RGMA|56963|RGM domain family, member A##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2	0.541846	CTCF.p2:1:0.542
chr18	46347384	46347499	reg1031606.p1	4.410	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-281668	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-411732	-	AM988836 AK296709 NM_001039360 EF120357	-683742	-	AK131394 NM_001190823	121706	-	AK301535 NM_001190822	128261	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	129326	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.0	
chr18	9951403	9951516	reg1029366.p1	4.410	+	AF044670 TSC_hg19_v1_chr18_+_9914252 AF057358 AF086627 BT019618	-37197	+	TSC_hg19_v1_chr18_+_9914239 AK292948 AF154847	-37236	+	TSC_hg19_v1_chr18_+_9914032 BC002992	-37418	+	BC053324 TSC_hg19_v1_chr18_+_10454599	503111	+	TSC_hg19_v1_chr18_+_10454623 AB056722 AB104887 NM_153000	503163	+	TSC_hg19_v1_chr18_+_10454634 AK300743	503193	+	AF044670|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AF057358|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AF086627|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##BT019618|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AK292948|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##AF154847|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##BC002992|VAPA|9218|VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa##BC053324|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AB056722|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AB104887|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##NM_153000|APCDD1|147495|adenomatosis polyposis coli down-regulated 1##AK300743|APCDD1|147495|adenomatosis polyposis coli down-regulated 1	0.76666	CTCF.p2:-12:0.725
chr20	3749174	3749355	reg1010084.p1	4.410	+	TSC_hg19_v1_chr20_-_3748383 BC012196 AK124341 BC024036 AK000557 AK024220 AK225109 AK308520 BC069204 NM_001039140	-855	-	NM_001197327 NM_052970 AK297120 TSC_hg19_v1_chr20_+_3713341 AK301294 BC090857 BC110881 AK056712 BC117284 BC126263 BC143932	-35897	+	AF230073 BC141884 NM_023068	-61490	-	BC022476 AL080154 EF560745 NM_015417 AK313766	12822	-	BC012297 BC003649 TSC_hg19_v1_chr20_-_3765799 BC033658 BC040446	16579	-	TSC_hg19_v1_chr20_-_3767358 X05299 AB464478 AF002713 BC053847 NM_001810	17871	-	BC012196|C20orf27|54976|chromosome 20 open reading frame 27##AK124341|C20orf27|54976|chromosome 20 open reading frame 27##BC024036|C20orf27|54976|chromosome 20 open reading frame 27##AK000557|C20orf27|54976|chromosome 20 open reading frame 27##AK024220|C20orf27|54976|chromosome 20 open reading frame 27##AK225109|C20orf27|54976|chromosome 20 open reading frame 27##AK308520|C20orf27|54976|chromosome 20 open reading frame 27##BC069204|C20orf27|54976|chromosome 20 open reading frame 27##NM_001039140|C20orf27|54976|chromosome 20 open reading frame 27##NM_001197327|HSPA12B|116835|heat shock 70kD protein 12B##NM_052970|HSPA12B|116835|heat shock 70kD protein 12B##AK297120|HSPA12B|116835|heat shock 70kD protein 12B##AK301294|HSPA12B|116835|heat shock 70kD protein 12B##BC090857|HSPA12B|116835|heat shock 70kD protein 12B##BC110881|HSPA12B|116835|heat shock 70kD protein 12B##AK056712|HSPA12B|116835|heat shock 70kD protein 12B##BC117284|HSPA12B|116835|heat shock 70kD protein 12B##BC126263|HSPA12B|116835|heat shock 70kD protein 12B##BC143932|HSPA12B|116835|heat shock 70kD protein 12B##AF230073|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##BC141884|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##NM_023068|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##BC022476|SPEF1|25876|sperm flagellar 1##AL080154|SPEF1|25876|sperm flagellar 1##EF560745|SPEF1|25876|sperm flagellar 1##NM_015417|SPEF1|25876|sperm flagellar 1##AK313766|SPEF1|25876|sperm flagellar 1##BC012297|CENPB|1059|centromere protein B, 80kDa##BC003649|CENPB|1059|centromere protein B, 80kDa##BC033658|CENPB|1059|centromere protein B, 80kDa##BC040446|CENPB|1059|centromere protein B, 80kDa##X05299|CENPB|1059|centromere protein B, 80kDa##AF002713|CENPB|1059|centromere protein B, 80kDa##BC053847|CENPB|1059|centromere protein B, 80kDa##NM_001810|CENPB|1059|centromere protein B, 80kDa	0.0	
chr3	178686776	178686842	reg1030121.p1	4.410	+	AF209747 NM_005832	-410257	+	BC017825 NM_181361	-432586	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1771750	-	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	102756	-	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	102817	-	TSC_hg19_v1_chr3_+_178866144 NM_006218 AK292940	179429	+	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3##NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	0.0	
chr4	1350142	1350250	reg1028400.p1	4.410	+	TSC_hg19_v1_chr4_+_1341031 BC110331 AB040963 NM_020894 BC140901	-8928	+	TSC_hg19_v1_chr4_+_1283693 AK296174 AK022515 AY236486 AK308901 AF084928 BC006470 AY189687 BT006957	-66490	+	TSC_hg19_v1_chr4_+_1283678 BC001225 NM_001017405 NM_005882 AK001088 AK022586 AK094253 AK300572	-66526	+	AK126919 NM_175918	35143	+	BC070112 NM_001013622 BC042071 NM_001174070	335656	-	BT007433 CU677395 DQ892370 DQ895579 Z71188 NM_006527 U75679 BC014908 BC015703 AK315635 TSC_hg19_v1_chr4_-_1714047 AK300826 AK091735 AX747152 AK093314	363796	-	BC110331|KIAA1530|57654|KIAA1530##AB040963|KIAA1530|57654|KIAA1530##NM_020894|KIAA1530|57654|KIAA1530##BC140901|KIAA1530|57654|KIAA1530##AK296174|MAEA|10296|macrophage erythroblast attacher##AK022515|MAEA|10296|macrophage erythroblast attacher##AY236486|MAEA|10296|macrophage erythroblast attacher##AK308901|MAEA|10296|macrophage erythroblast attacher##AF084928|MAEA|10296|macrophage erythroblast attacher##BC006470|MAEA|10296|macrophage erythroblast attacher##AY189687|MAEA|10296|macrophage erythroblast attacher##BT006957|MAEA|10296|macrophage erythroblast attacher##BC001225|MAEA|10296|macrophage erythroblast attacher##NM_001017405|MAEA|10296|macrophage erythroblast attacher##NM_005882|MAEA|10296|macrophage erythroblast attacher##AK001088|MAEA|10296|macrophage erythroblast attacher##AK022586|MAEA|10296|macrophage erythroblast attacher##AK094253|MAEA|10296|macrophage erythroblast attacher##AK300572|MAEA|10296|macrophage erythroblast attacher##AK126919|CRIPAK|285464|cysteine-rich PAK1 inhibitor##NM_175918|CRIPAK|285464|cysteine-rich PAK1 inhibitor##BC070112|FAM53A|152877|family with sequence similarity 53, member A##NM_001013622|FAM53A|152877|family with sequence similarity 53, member A##BC042071|FAM53A|152877|family with sequence similarity 53, member A##NM_001174070|FAM53A|152877|family with sequence similarity 53, member A##BT007433|SLBP|7884|stem-loop binding protein##DQ892370|SLBP|7884|stem-loop binding protein##DQ895579|SLBP|7884|stem-loop binding protein##Z71188|SLBP|7884|stem-loop binding protein##NM_006527|SLBP|7884|stem-loop binding protein##U75679|SLBP|7884|stem-loop binding protein##BC014908|SLBP|7884|stem-loop binding protein##BC015703|SLBP|7884|stem-loop binding protein##AK315635|SLBP|7884|stem-loop binding protein##AK300826|SLBP|7884|stem-loop binding protein##AK091735|SLBP|7884|stem-loop binding protein##AK093314|SLBP|7884|stem-loop binding protein	0.971909	CTCF.p2:-17:0.972
chr10	52268105	52268205	reg1026386.p1	4.409	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-259815	-	NM_018232	-430270	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-440433	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	115548	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	231555	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	377238	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.0	
chr1	244615485	244615654	reg1031683.p2	4.409	+	TSC_hg19_v1_chr1_-_244615392 AK308749 NM_001126	-231	-	CU680302 EU831433 EU831525 TSC_hg19_v1_chr1_-_244615212 AK025514 AK303886 BC012356	-393	-	BC054479 NM_001012970	-99633	+	NM_001130957 NM_001242340 NM_173807 TSC_hg19_v1_chr1_+_244624690 BC032859 BC028392 AK303059 BX648685 AK302609 DQ891006 EU176575 CU689566	9132	+	TSC_hg19_v1_chr1_+_244816350 NM_016076	200782	+	AK314664 TSC_hg19_v1_chr1_+_244816381	200812	+	AK308749|ADSS|159|adenylosuccinate synthase##NM_001126|ADSS|159|adenylosuccinate synthase##EU831433|ADSS|159|adenylosuccinate synthase##EU831525|ADSS|159|adenylosuccinate synthase##AK025514|ADSS|159|adenylosuccinate synthase##AK303886|ADSS|159|adenylosuccinate synthase##BC012356|ADSS|159|adenylosuccinate synthase##BC054479|C1orf100|200159|chromosome 1 open reading frame 100##NM_001012970|C1orf100|200159|chromosome 1 open reading frame 100##NM_001130957|C1orf101|257044|chromosome 1 open reading frame 101##NM_001242340|C1orf101|257044|chromosome 1 open reading frame 101##NM_173807|C1orf101|257044|chromosome 1 open reading frame 101##BC032859|C1orf101|257044|chromosome 1 open reading frame 101##BC028392|C1orf101|257044|chromosome 1 open reading frame 101##AK303059|C1orf101|257044|chromosome 1 open reading frame 101##BX648685|C1orf101|257044|chromosome 1 open reading frame 101##AK302609|C1orf101|257044|chromosome 1 open reading frame 101##DQ891006|C1orf101|257044|chromosome 1 open reading frame 101##EU176575|C1orf101|257044|chromosome 1 open reading frame 101##NM_016076|PPPDE1|51029|PPPDE peptidase domain containing 1##AK314664|PPPDE1|51029|PPPDE peptidase domain containing 1	0.814129	CTCF.p2:62:0.814
chr14	75716244	75716403	reg1028914.p2	4.409	+	TSC_hg19_v1_chr14_-_75643341 NM_006827	-72971	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	-72990	-	TSC_hg19_v1_chr14_-_75643322 AK296800 AK312384	-73003	-	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	29259	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	178318	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	178690	+	NM_006827|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK296800|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK312384|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2	0.0	
chr17	43229505	43229599	reg1026499.p2	4.409	+	TSC_hg19_v1_chr17_+_43225936 BC006460	-3617	+	TSC_hg19_v1_chr17_+_43225841 AK023624 AB021179	-3701	+	NM_006460	-4869	+	AK056946 NM_144608	8711	+	TSC_hg19_v1_chr17_+_43299284 AY278319 NM_005892 BC111564	69808	+	AK096807 TSC_hg19_v1_chr17_-_43319268	89644	-	BC006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK023624|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AB021179|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##NM_006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK056946|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##NM_144608|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##AY278319|FMNL1|752|formin-like 1##NM_005892|FMNL1|752|formin-like 1##BC111564|FMNL1|752|formin-like 1	0.0	
chr18	6393803	6393887	reg1027164.p1	4.409	+	NM_001080209	-501743	-	TSC_hg19_v1_chr18_-_5630663 BC008377	-763198	-	AF069072 AB023204 NM_012307 TSC_hg19_v1_chr18_-_5543997 AK128531	-849857	-	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	21070	-	NM_001243517	117569	+	NM_001010000 BX648684 AK308259 AK302026	440620	+	NM_001080209|TMEM200C|645369|transmembrane protein 200C##BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AF069072|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AB023204|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_012307|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AK128531|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28	0.412317	CTCF.p2:46:0.412
chr2	210290321	210290441	reg1032341.p1	4.409	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	-1627	+	BC036811 NM_005048 U25128 HQ257935 AY497546	-1018720	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-1065756	+	BC110423 TSC_hg19_v1_chr2_+_210444185	153789	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	154013	+	TSC_hg19_v1_chr2_+_210636707 AK090815 AX746629 NM_032504 NM_182587	346327	+	NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##AK294181|PTH2R|5746|parathyroid hormone 2 receptor##BC110423|MAP2|4133|microtubule-associated protein 2##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2##AK090815|UNC80|285175|unc-80 homolog (C. elegans)##NM_032504|UNC80|285175|unc-80 homolog (C. elegans)##NM_182587|UNC80|285175|unc-80 homolog (C. elegans)	0.0	
chr8	103922524	103922633	reg1027006.p2	4.409	+	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	-46183	-	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	-46219	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	-254646	-	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	110689	+	TSC_hg19_v1_chr8_+_104033310 AK308632 BC010960 X69151 AK000064	110742	+	TSC_hg19_v1_chr8_+_104152984 NM_001024372 NM_024812 BC035038 AK022077 BC011517 AK093819 AF371319 AF371323 DQ893318 DQ896633	230422	+	BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK308632|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC010960|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##X69151|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK000064|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##NM_001024372|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_024812|BAALC|79870|brain and acute leukemia, cytoplasmic##BC035038|BAALC|79870|brain and acute leukemia, cytoplasmic##AK022077|BAALC|79870|brain and acute leukemia, cytoplasmic##BC011517|BAALC|79870|brain and acute leukemia, cytoplasmic##AK093819|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371319|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371323|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ893318|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ896633|BAALC|79870|brain and acute leukemia, cytoplasmic	0.0	
chr9	130540831	130540936	reg1034678.p1	4.409	+	CU693348 BC027962 AY358440 AF124251 AK292041 BX647905 NM_001252334 NM_005489	-7305	-	AK311510 NM_001142532 AK294386 NM_001142531	-16176	-	AK291393 TSC_hg19_v1_chr9_-_130517562 NM_001142534 AK056068 NM_001142533	-23316	-	BC032365 AK292718 AK096983 AK128287 NM_170600	96	-	NM_001261 TSC_hg19_v1_chr9_+_130548312	7425	+	TSC_hg19_v1_chr9_+_130548326 X80230	7452	+	BC027962|SH2D3C|10044|SH2 domain containing 3C##AY358440|SH2D3C|10044|SH2 domain containing 3C##AF124251|SH2D3C|10044|SH2 domain containing 3C##AK292041|SH2D3C|10044|SH2 domain containing 3C##BX647905|SH2D3C|10044|SH2 domain containing 3C##NM_001252334|SH2D3C|10044|SH2 domain containing 3C##NM_005489|SH2D3C|10044|SH2 domain containing 3C##AK311510|SH2D3C|10044|SH2 domain containing 3C##NM_001142532|SH2D3C|10044|SH2 domain containing 3C##AK294386|SH2D3C|10044|SH2 domain containing 3C##NM_001142531|SH2D3C|10044|SH2 domain containing 3C##AK291393|SH2D3C|10044|SH2 domain containing 3C##NM_001142534|SH2D3C|10044|SH2 domain containing 3C##AK056068|SH2D3C|10044|SH2 domain containing 3C##NM_001142533|SH2D3C|10044|SH2 domain containing 3C##BC032365|SH2D3C|10044|SH2 domain containing 3C##AK292718|SH2D3C|10044|SH2 domain containing 3C##AK096983|SH2D3C|10044|SH2 domain containing 3C##AK128287|SH2D3C|10044|SH2 domain containing 3C##NM_170600|SH2D3C|10044|SH2 domain containing 3C##NM_001261|CDK9|1025|cyclin-dependent kinase 9##X80230|CDK9|1025|cyclin-dependent kinase 9	0.0	
chr10	44531111	44531292	reg1031120.p2	4.408	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-386895	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-386996	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-429304	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	349298	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	875517	+	AK056518 TSC_hg19_v1_chr10_-_45455156	923946	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.0	
chr13	32884655	32884835	reg1002835.p2	4.408	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	-279304	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-463843	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-571032	+	BC146956 BC146965 NM_001136571	1344	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	4872	+	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	117613	-	AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1	0.0	
chr17	16884149	16884285	reg1028932.p1	4.408	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	-8813	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-290613	+	AK131401 NM_020787	-327056	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	61747	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	225396	-	TSC_hg19_v1_chr17_-_17109636 BC031263 AK295282 NM_178836	225440	-	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6##BC031263|PLD6|201164|phospholipase D family, member 6##AK295282|PLD6|201164|phospholipase D family, member 6##NM_178836|PLD6|201164|phospholipase D family, member 6	0.0	
chr5	403097	403277	reg1027483.p2	4.408	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-98897	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-131382	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-131419	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	40043	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	40163	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	69925	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.0	
chr7	149321808	149321943	reg1015199.p1	4.408	+	TSC_hg19_v1_chr7_-_149321856 BC047675	-21	-	AB590454 AK295771 TSC_hg19_v1_chr7_-_149321793 AK022762	-133	-	TSC_hg19_v1_chr7_-_149194899 NM_001163474 NM_152557 AK128244	-126977	-	TSC_hg19_v1_chr7_+_149412043 BC142722 BC146667 AB058765 BC150330 BC152409 NM_032534	90212	+	BC052625 NM_207336 BC038972	148425	-	NM_198455	151255	+	BC047675|ZNF767|79970|zinc finger family member 767##AK295771|ZNF767|79970|zinc finger family member 767##AK022762|ZNF767|79970|zinc finger family member 767##NM_001163474|ZNF746|155061|zinc finger protein 746##NM_152557|ZNF746|155061|zinc finger protein 746##AK128244|ZNF746|155061|zinc finger protein 746##BC142722|KRBA1|84626|KRAB-A domain containing 1##BC146667|KRBA1|84626|KRAB-A domain containing 1##AB058765|KRBA1|84626|KRAB-A domain containing 1##BC150330|KRBA1|84626|KRAB-A domain containing 1##BC152409|KRBA1|84626|KRAB-A domain containing 1##NM_032534|KRBA1|84626|KRAB-A domain containing 1##BC052625|ZNF467|168544|zinc finger protein 467##NM_207336|ZNF467|168544|zinc finger protein 467##BC038972|ZNF467|168544|zinc finger protein 467##NM_198455|SSPO|23145|SCO-spondin homolog (Bos taurus)	0.0	
chr9	140652120	140652300	reg1033210.p1	4.408	+	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	-13681	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-138743	+	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	-138767	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	120024	+	TSC_hg19_v1_chr9_+_140918045 AB209467	265864	+	TSC_hg19_v1_chr9_+_141044539 AK308459	392341	+	AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AK308459|TUBBP5|643224|tubulin, beta pseudogene 5	0.0	
chr10	23447062	23447227	reg1014918.p1	4.407	+	BC117471 BC130380 NM_012228 BC018030 TSC_hg19_v1_chr10_+_23384507 AF151889 BC066305 AF122004 EU446941	-62661	+	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	-230163	+	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	-443654	-	AB463998 NM_178161	34314	+	BC035732 NM_153714	186627	-	AB188491 NM_001145373 TSC_hg19_v1_chr10_+_23728216	281066	+	BC117471|MSRB2|22921|methionine sulfoxide reductase B2##BC130380|MSRB2|22921|methionine sulfoxide reductase B2##NM_012228|MSRB2|22921|methionine sulfoxide reductase B2##BC018030|MSRB2|22921|methionine sulfoxide reductase B2##AF151889|MSRB2|22921|methionine sulfoxide reductase B2##BC066305|MSRB2|22921|methionine sulfoxide reductase B2##AF122004|MSRB2|22921|methionine sulfoxide reductase B2##EU446941|MSRB2|22921|methionine sulfoxide reductase B2##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a##BC035732|C10orf67|256815|chromosome 10 open reading frame 67##NM_153714|C10orf67|256815|chromosome 10 open reading frame 67##AB188491|OTUD1|220213|OTU domain containing 1##NM_001145373|OTUD1|220213|OTU domain containing 1	0.084584	
chr12	50056927	50057103	reg1024273.p2	4.407	+	BC067364 NM_001031698	-32689	+	TSC_hg19_v1_chr12_+_50017344 AK123353 BC050398 AL834216 NM_012272	-39644	+	AM393365 AL136748 BC035621 AK302702 AK093242 AX748009 NM_032130	-57670	-	AB384661 TSC_hg19_v1_chr12_-_50101046	43995	-	TSC_hg19_v1_chr12_-_50101189 AK128195	44143	-	TSC_hg19_v1_chr12_-_50101206 AB095934 BC159100 NM_175736 NM_198900	44197	-	BC067364|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_001031698|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AK123353|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##BC050398|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AL834216|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_012272|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AM393365|FAM186B|84070|family with sequence similarity 186, member B##AL136748|FAM186B|84070|family with sequence similarity 186, member B##BC035621|FAM186B|84070|family with sequence similarity 186, member B##AK302702|FAM186B|84070|family with sequence similarity 186, member B##AK093242|FAM186B|84070|family with sequence similarity 186, member B##NM_032130|FAM186B|84070|family with sequence similarity 186, member B##AK128195|FMNL3|91010|formin-like 3##AB095934|FMNL3|91010|formin-like 3##BC159100|FMNL3|91010|formin-like 3##NM_175736|FMNL3|91010|formin-like 3##NM_198900|FMNL3|91010|formin-like 3	0.0	
chr14	107251754	107251899	reg1036328.p1	4.407	+	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	-32828	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	-40525	-	JF810265 DQ454799 FJ840007 FJ840015 DQ454561 DQ454955 DQ454612 DQ454663 DQ454685 FJ840092 FJ840295 FJ873837 AJ008218 JF810272 JF810273 AY003862 AJ132562 Y08732 AF103327 EU099062 EU620029 GQ504979 HQ392897 AF103116 AF103087 AF103100 HM774925 JN110942 HM774229 FJ385350 GQ504960 HM774112 HM774402 HM774448 HM774462 HM774524 HM774766 HM775010 AF103135 HM774927 HM774932 HM774189 U00529 Y14940 AF103057 AF103351 EU146338 L03141 L03153 AF029328 AF485459 DQ431489 L03143 L03173 L03177 AF035801 AY423195 AY423198 AY423206 DQ431488 DQ431492 HM995020 DQ431490 GU570297 HM152513 HM994969 HM994972 HM994977 HM994978 HM994981 HM994982 HM994989 HM995522 HM995532 HM996141 HM996526 DQ187603 DQ187629 DQ322887 DQ322888 DQ322889 DQ322890 DQ322960 DQ840663 DQ840674 DQ840675 DQ840677 DQ840678 DQ840680 DQ840681 DQ840682 DQ840683 DQ840687 DQ840758 DQ840769 DQ840770 DQ840771 DQ840773 DQ840781 DQ840844 DQ840857 DQ840859 DQ840860 DQ840863 DQ840910 DQ840917 DQ840918 AF021973 AF048774 AF115122 AF151702 AF174111 AJ238039 AJ579199 AJ579279 AY866726 AY866767 DQ100754 DQ100773 DQ100787 DQ100849 DQ100977 DQ840729 DQ926055 DQ926218 DQ926255 DQ926308 EF177956 EF178021 GQ267831 U96395 X99352 Y17142 AB063699 AB063849 AB063916 AB067258 AB363156 AF021945 AF129753 AF471200 AF471528 AF471540 AF471541 AF471542 AF471546 AJ300788 AJ389185 AJ556647 AJ556667 AJ579161 AY554174 AY554177 AY554178 AY573190 AY640527 AY640562 AY846273 AY971106 D83679 DQ065693 DQ535269 DQ535318 DQ535335 DQ535453 DQ535464 DQ535482 DQ926153 DQ926492 EF178117 EF178127 EF178131 EU835555 FJ195515 FJ492899 FN563769 GU570345 GU570350 HQ378386 JF806284 U97244 X99353 L33033 Z11950 BC033178 TSC_hg19_v1_chr14_-_107199472	-52526	-	DQ205161 AY392971 AF085654 X58399 X58398 BC002792 TSC_hg19_v1_chr14_-_107259820	7894	-	None	None	None	None	None	None	Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC033178|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##X58399|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##X58398|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##BC002792|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)	1.062105	CTCF.p2:10:0.437	CTCF.p2:-96:0.625
chr14	88846862	88846996	reg1032160.p2	4.407	+	AF279890 NM_021161	-53677	-	AK315263 TSC_hg19_v1_chr14_-_88793059 EU978938	-53926	-	AK290518 TSC_hg19_v1_chr14_-_88789574 AK313499 NM_138317	-57355	-	NM_001040428 NM_018418 TSC_hg19_v1_chr14_+_88852033 AF144487 AL136604 AK225746 AK290631 AK293007 CR936777	5085	+	AK055864 TSC_hg19_v1_chr14_+_88852071 AB463283 AM393238 CR533563	5184	+	TSC_hg19_v1_chr14_-_89016807 BC143846 BC143847	169910	-	AF279890|KCNK10|54207|potassium channel, subfamily K, member 10##NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10##AK315263|KCNK10|54207|potassium channel, subfamily K, member 10##EU978938|KCNK10|54207|potassium channel, subfamily K, member 10##AK290518|KCNK10|54207|potassium channel, subfamily K, member 10##AK313499|KCNK10|54207|potassium channel, subfamily K, member 10##NM_138317|KCNK10|54207|potassium channel, subfamily K, member 10##NM_001040428|SPATA7|55812|spermatogenesis associated 7##NM_018418|SPATA7|55812|spermatogenesis associated 7##AF144487|SPATA7|55812|spermatogenesis associated 7##AL136604|SPATA7|55812|spermatogenesis associated 7##AK225746|SPATA7|55812|spermatogenesis associated 7##AK290631|SPATA7|55812|spermatogenesis associated 7##AK293007|SPATA7|55812|spermatogenesis associated 7##CR936777|SPATA7|55812|spermatogenesis associated 7##AK055864|SPATA7|55812|spermatogenesis associated 7##AM393238|SPATA7|55812|spermatogenesis associated 7##CR533563|SPATA7|55812|spermatogenesis associated 7##BC143846|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21##BC143847|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21	0.076421	
chr15	63581289	63581363	reg1002636.p2	4.407	+	NM_001145646 NM_031301 TSC_hg19_v1_chr15_+_63569803 AK291204 AL136671 BC020905 AB189172 AB197122 AF508794 AX776001 AY358698 AB528062 AM392724 AM392878 DQ891401 CU676772 AK307725	-11513	+	TSC_hg19_v1_chr15_+_63481804 AK001111 AK095444 AK297598 AL833365 BC020654 AB464123 CU676608	-99521	+	TSC_hg19_v1_chr15_+_63481724 NM_016530 AB038995	-99597	+	BT006656 DQ893188 DQ896511 EU831616 EU831623 EU831703 EU831708 AF051882 BC000278 AF037335 BC011691 TSC_hg19_v1_chr15_-_63674046 AK096845 BC023981	92666	-	AK315769 NM_001218 NM_206925 TSC_hg19_v1_chr15_-_63674076	92749	-	TSC_hg19_v1_chr15_+_63796791 AK314223	215456	+	NM_001145646|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##NM_031301|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK291204|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AL136671|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##BC020905|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB189172|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB197122|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AF508794|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AY358698|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392724|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392878|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##DQ891401|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK307725|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK001111|RAB8B|51762|RAB8B, member RAS oncogene family##AK095444|RAB8B|51762|RAB8B, member RAS oncogene family##AK297598|RAB8B|51762|RAB8B, member RAS oncogene family##AL833365|RAB8B|51762|RAB8B, member RAS oncogene family##BC020654|RAB8B|51762|RAB8B, member RAS oncogene family##NM_016530|RAB8B|51762|RAB8B, member RAS oncogene family##AB038995|RAB8B|51762|RAB8B, member RAS oncogene family##BT006656|CA12|771|carbonic anhydrase XII##DQ893188|CA12|771|carbonic anhydrase XII##DQ896511|CA12|771|carbonic anhydrase XII##EU831616|CA12|771|carbonic anhydrase XII##EU831623|CA12|771|carbonic anhydrase XII##EU831703|CA12|771|carbonic anhydrase XII##EU831708|CA12|771|carbonic anhydrase XII##AF051882|CA12|771|carbonic anhydrase XII##BC000278|CA12|771|carbonic anhydrase XII##AF037335|CA12|771|carbonic anhydrase XII##BC011691|CA12|771|carbonic anhydrase XII##AK096845|CA12|771|carbonic anhydrase XII##BC023981|CA12|771|carbonic anhydrase XII##AK315769|CA12|771|carbonic anhydrase XII##NM_001218|CA12|771|carbonic anhydrase XII##NM_206925|CA12|771|carbonic anhydrase XII##AK314223|USP3|9960|ubiquitin specific peptidase 3	0.0	
chr16	34825422	34825532	reg1031976.p1	4.407	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-1563344	+	AL133588 NM_016212	-1563963	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-1619879	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	11829795	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	11829829	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	11897585	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.830068	CTCF.p2:-34:0.830
chr16	53254646	53254766	reg1031662.p2	4.407	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	-89646	+	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	-121607	+	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	-165825	+	NM_001207030	150334	-	TSC_hg19_v1_chr16_+_53468350 NM_005611	213646	+	TSC_hg19_v1_chr16_+_53468362 BC034490	213657	+	DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_001207030|LOC643802|643802|u3 small nucleolar ribonucleoprotein protein MPP10-like##NM_005611|RBL2|5934|retinoblastoma-like 2 (p130)##BC034490|RBL2|5934|retinoblastoma-like 2 (p130)	0.38111	CTCF.p2:-2:0.381
chr19	2887485	2887614	reg1032035.p1	4.407	+	AK021699 AK225297 NM_024967 BC009374	-20207	+	NM_001172775 NM_152791 AK093163 AX747966 AL832140 BX647423 BC022022 AK292954	-46091	+	TSC_hg19_v1_chr19_+_2819942 BC000113 CU690506	-67544	+	EF534355 NM_173480 TSC_hg19_v1_chr19_+_2900954 BX537601 BC028974 AK314848	13386	+	TSC_hg19_v1_chr19_-_2944927 AK290979 BC043354 BC062561 NM_021217	57394	-	TSC_hg19_v1_chr19_+_2977532 NM_001143986 NM_024760 AK024071 BC013986 BC020206 BC007329 BC068052	90017	+	AK021699|ZNF556|80032|zinc finger protein 556##AK225297|ZNF556|80032|zinc finger protein 556##NM_024967|ZNF556|80032|zinc finger protein 556##BC009374|ZNF556|80032|zinc finger protein 556##NM_001172775|ZNF555|148254|zinc finger protein 555##NM_152791|ZNF555|148254|zinc finger protein 555##AK093163|ZNF555|148254|zinc finger protein 555##AL832140|ZNF555|148254|zinc finger protein 555##BX647423|ZNF555|148254|zinc finger protein 555##BC022022|ZNF555|148254|zinc finger protein 555##AK292954|ZNF555|148254|zinc finger protein 555##BC000113|ZNF554|115196|zinc finger protein 554##EF534355|ZNF57|126295|zinc finger protein 57##NM_173480|ZNF57|126295|zinc finger protein 57##BX537601|ZNF57|126295|zinc finger protein 57##BC028974|ZNF57|126295|zinc finger protein 57##AK314848|ZNF57|126295|zinc finger protein 57##AK290979|ZNF77|58492|zinc finger protein 77##BC043354|ZNF77|58492|zinc finger protein 77##BC062561|ZNF77|58492|zinc finger protein 77##NM_021217|ZNF77|58492|zinc finger protein 77##NM_001143986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##NM_024760|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##AK024071|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC013986|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC020206|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC007329|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)##BC068052|TLE6|79816|transducin-like enhancer of split 6 (E(sp1) homolog, Drosophila)	0.906932	CTCF.p2:-8:0.907
chr2	102371935	102372112	reg1031470.p1	4.407	+	TSC_hg19_v1_chr2_+_102314168 NM_001242560 NM_004834 NM_145686 BC064691 AK296396 AF096300 NM_001242559 NM_145687 AB384511 AY212247 AY834276	-57671	+	AK131289 AK298610 NM_001145664 TSC_hg19_v1_chr2_-_102091212	-280830	-	TSC_hg19_v1_chr2_-_102003966 BC032949 BC047514 NM_153836 AB046109	-368034	-	TSC_hg19_v1_chr2_+_102508334 BC045694	136319	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	136509	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	236340	+	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK131289|RFX8|731220|regulatory factor X, 8##AK298610|RFX8|731220|regulatory factor X, 8##NM_001145664|RFX8|731220|regulatory factor X, 8##BC032949|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC047514|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_153836|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AB046109|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II	0.0	
chr22	23277715	23277895	reg1012220.p1	4.407	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	-47722	+	TSC_hg19_v1_chr22_+_23222900 AK127411 S77601 X57802 X57803 X57816 X57818 AB369252 AF026919 AF026925 AY190825 L26400 AF490955 AF490961	-54876	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	-64112	+	TSC_hg19_v1_chr22_+_23412527 BC037333 BC026342 NM_002073	134711	+	AK312519 TSC_hg19_v1_chr22_+_23412728 AK293653	134924	+	BC008986 AF133587 NM_014433 AK299530 AK310327	206438	-	AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AB369252|CYAT1|100290481|immunoglobulin lambda light chain-like##BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3##BC037333|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC026342|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##NM_002073|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK312519|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK293653|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1##AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1##NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1	0.0	
chr2	43653638	43653795	reg1023810.p1	4.407	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-199974	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-199986	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-200371	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	169432	-	TSC_hg19_v1_chr2_+_43864411 BC063310	210697	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	210723	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.0	
chr2	86305760	86305941	reg1007262.p1	4.407	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-189764	-	AY152815 NM_001042437	-211058	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-324845	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	27133	-	NM_015425	27427	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	27491	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.0	
chr5	5047210	5047390	reg1032255.p2	4.407	+	AY335938 NM_024337	-1451133	+	AY249325 NM_178569 BC101608 BC101634 BC143638 BC143639 BC143640 BC171731	-2294999	+	AB188492 NM_001134222 NM_033267 BC065189	-2295529	-	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	93211	+	TSC_hg19_v1_chr5_+_5422777 AK126937	375475	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	375609	+	AY335938|IRX1|79192|iroquois homeobox 1##NM_024337|IRX1|79192|iroquois homeobox 1##AY249325|C5orf38|153571|chromosome 5 open reading frame 38##NM_178569|C5orf38|153571|chromosome 5 open reading frame 38##BC101608|C5orf38|153571|chromosome 5 open reading frame 38##BC101634|C5orf38|153571|chromosome 5 open reading frame 38##BC143638|C5orf38|153571|chromosome 5 open reading frame 38##BC143639|C5orf38|153571|chromosome 5 open reading frame 38##BC143640|C5orf38|153571|chromosome 5 open reading frame 38##BC171731|C5orf38|153571|chromosome 5 open reading frame 38##AB188492|IRX2|153572|iroquois homeobox 2##NM_001134222|IRX2|153572|iroquois homeobox 2##NM_033267|IRX2|153572|iroquois homeobox 2##BC065189|IRX2|153572|iroquois homeobox 2##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947	0.0	
chr5	67665447	67665618	reg1029119.p2	4.407	+	AK094785 NM_001242466 AK294919	-77080	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-78986	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-81238	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	724271	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	724350	+	AK292925 TSC_hg19_v1_chr5_+_68389913	724381	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.0	
chr8	22562376	22562514	reg1022564.p2	4.407	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-11661	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-11940	-	AK294968 AK295834 NM_001199881	-12371	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	222879	-	AK092617 BC034917 NM_001160036	282478	+	NM_001160037	290915	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.0	
chr9	6049911	6050032	reg1033216.p2	4.407	+	AF039023 AK300408 BC098406 TSC_hg19_v1_chr9_-_6015616 AK307840 BX537405 NM_001243202 NM_001243203 NM_012416	-34340	-	TSC_hg19_v1_chr9_-_6007953 NM_001017969	-42007	-	BC108654 TSC_hg19_v1_chr9_-_5968443	-81563	-	NM_001199640 NM_001199641 NM_033439 AK295908 AK313414 TSC_hg19_v1_chr9_+_6215806 AK303943 BC047085	165825	+	NM_001001874 NM_001001875 NM_033516 AK057479 AY032877 BC017589 BC042113 BC033792	278404	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	363173	+	AF039023|RANBP6|26953|RAN binding protein 6##AK300408|RANBP6|26953|RAN binding protein 6##BC098406|RANBP6|26953|RAN binding protein 6##BX537405|RANBP6|26953|RAN binding protein 6##NM_001243202|RANBP6|26953|RAN binding protein 6##NM_001243203|RANBP6|26953|RAN binding protein 6##NM_012416|RANBP6|26953|RAN binding protein 6##NM_001017969|KIAA2026|158358|KIAA2026##NM_001199640|IL33|90865|interleukin 33##NM_001199641|IL33|90865|interleukin 33##NM_033439|IL33|90865|interleukin 33##AK295908|IL33|90865|interleukin 33##AK313414|IL33|90865|interleukin 33##AK303943|IL33|90865|interleukin 33##BC047085|IL33|90865|interleukin 33##NM_001001874|TPD52L3|89882|tumor protein D52-like 3##NM_001001875|TPD52L3|89882|tumor protein D52-like 3##NM_033516|TPD52L3|89882|tumor protein D52-like 3##AK057479|TPD52L3|89882|tumor protein D52-like 3##AY032877|TPD52L3|89882|tumor protein D52-like 3##BC017589|TPD52L3|89882|tumor protein D52-like 3##BC042113|TPD52L3|89882|tumor protein D52-like 3##BC033792|TPD52L3|89882|tumor protein D52-like 3##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	0.993307	CTCF.p2:-2:0.993
chr1	174128602	174128746	reg1032912.p2	4.406	+	BC041888 NM_014857 TSC_hg19_v1_chr1_+_174128608	-74	+	TSC_hg19_v1_chr1_-_173991524 AB007961	-137159	-	AB095945 BC136784 BC144408 AK122948 NM_172071	-166545	-	AK095838 TSC_hg19_v1_chr1_+_174128676 AL157958	18	+	BC095532 NM_005684 CU688296 CU688298 BC067456 BC067457 BC067458 BC067459 BC067460 BC069460 HQ995526	288556	+	AB007940 NM_001243765	640360	+	BC041888|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_014857|RABGAP1L|9910|RAB GTPase activating protein 1-like##AB095945|RC3H1|149041|ring finger and CCCH-type domains 1##BC136784|RC3H1|149041|ring finger and CCCH-type domains 1##BC144408|RC3H1|149041|ring finger and CCCH-type domains 1##AK122948|RC3H1|149041|ring finger and CCCH-type domains 1##NM_172071|RC3H1|149041|ring finger and CCCH-type domains 1##AK095838|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL157958|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC095532|GPR52|9293|G protein-coupled receptor 52##NM_005684|GPR52|9293|G protein-coupled receptor 52##BC067456|GPR52|9293|G protein-coupled receptor 52##BC067457|GPR52|9293|G protein-coupled receptor 52##BC067458|GPR52|9293|G protein-coupled receptor 52##BC067459|GPR52|9293|G protein-coupled receptor 52##BC067460|GPR52|9293|G protein-coupled receptor 52##BC069460|GPR52|9293|G protein-coupled receptor 52##HQ995526|GPR52|9293|G protein-coupled receptor 52##AB007940|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243765|RABGAP1L|9910|RAB GTPase activating protein 1-like	0.0	
chr12	106695315	106695495	reg1026735.p1	4.406	+	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	-53558	-	AB011109 BC152462 NM_014840	-161595	-	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	-162723	-	TSC_hg19_v1_chr12_+_106696595 BC033617 NM_152772 BC017872 AF306671 AF306858 AK314055	1167	+	NM_018082 TSC_hg19_v1_chr12_+_106751498 BX537447	56065	+	TSC_hg19_v1_chr12_+_106751589 BC046238 AK291635 AY092084	56172	+	BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4##AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC033617|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_152772|TCP11L2|255394|t-complex 11 (mouse)-like 2##BC017872|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306671|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306858|TCP11L2|255394|t-complex 11 (mouse)-like 2##AK314055|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BC046238|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AK291635|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AY092084|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	0.0	
chr13	20013258	20013342	reg1008548.p1	4.406	+	BC011721 NM_006001	-257338	-	None	None	None	None	None	None	BC128146 BC128147 AJ421032 AY219890 NM_001141968 NM_130785 NM_199254	97593	-	TSC_hg19_v1_chr13_+_20207808 AK300258 NM_017520 BC017322 AK092556 AX747597 AL832864 BC003542	194535	+	TSC_hg19_v1_chr13_-_20346399 AL834505	333140	-	BC011721|TUBA3C|7278|tubulin, alpha 3c##NM_006001|TUBA3C|7278|tubulin, alpha 3c##BC128146|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##BC128147|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AJ421032|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AY219890|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_001141968|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_130785|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_199254|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AK300258|MPHOSPH8|54737|M-phase phosphoprotein 8##NM_017520|MPHOSPH8|54737|M-phase phosphoprotein 8##BC017322|MPHOSPH8|54737|M-phase phosphoprotein 8##AK092556|MPHOSPH8|54737|M-phase phosphoprotein 8##AL832864|MPHOSPH8|54737|M-phase phosphoprotein 8##BC003542|MPHOSPH8|54737|M-phase phosphoprotein 8##AL834505|PSPC1|55269|paraspeckle component 1	0.0	
chr15	40314248	40314340	reg1032986.p1	4.406	+	TSC_hg19_v1_chr15_+_40294764 AK074361	-19498	+	TSC_hg19_v1_chr15_+_40226315 BC078179 NM_001013703 BC061591 AB527135 CU687326	-87954	+	TSC_hg19_v1_chr15_-_40213138 D38449 NM_007223	-101167	-	AB451391 CU690086 TSC_hg19_v1_chr15_-_40331370 X73459 BC071716 U07857 BC100031 BC035495 BC051006 AB061546 NM_003134	17058	-	TSC_hg19_v1_chr15_+_40331506 AK127696	17184	+	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	83992	-	AK074361|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##BC078179|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##NM_001013703|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##BC061591|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##D38449|GPR176|11245|G protein-coupled receptor 176##NM_007223|GPR176|11245|G protein-coupled receptor 176##AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AK127696|LOC100131089|100131089|uncharacterized LOC100131089##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor	0.761989	CTCF.p2:7:0.762
chr15	45011810	45011919	reg1029766.p2	4.406	+	TSC_hg19_v1_chr15_+_45003710 NM_004048 AK303560 AK315776 S82297 S82300 S54761 BC032589 BC064910 X07621 AY007153 AB021288 AB463439 AY187687 CR457066 DQ839493 DQ839494 DQ884406 DQ890551 DQ893711 V00567	-8143	+	AK130783 TSC_hg19_v1_chr15_-_45003540	-8318	-	BC036924 NM_001145112	-42779	-	AK311550 TSC_hg19_v1_chr15_+_45021275 DQ232883	9389	+	BC031266 TSC_hg19_v1_chr15_+_45021331	9467	+	NM_080745 NM_182985	16695	+	NM_004048|B2M|567|beta-2-microglobulin##AK303560|B2M|567|beta-2-microglobulin##AK315776|B2M|567|beta-2-microglobulin##S82297|B2M|567|beta-2-microglobulin##S82300|B2M|567|beta-2-microglobulin##S54761|B2M|567|beta-2-microglobulin##BC032589|B2M|567|beta-2-microglobulin##BC064910|B2M|567|beta-2-microglobulin##X07621|B2M|567|beta-2-microglobulin##AY007153|B2M|567|beta-2-microglobulin##AB021288|B2M|567|beta-2-microglobulin##AY187687|B2M|567|beta-2-microglobulin##CR457066|B2M|567|beta-2-microglobulin##DQ839493|B2M|567|beta-2-microglobulin##DQ839494|B2M|567|beta-2-microglobulin##DQ884406|B2M|567|beta-2-microglobulin##DQ890551|B2M|567|beta-2-microglobulin##DQ893711|B2M|567|beta-2-microglobulin##V00567|B2M|567|beta-2-microglobulin##BC036924|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##NM_001145112|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##DQ232883|TRIM69|140691|tripartite motif containing 69##BC031266|TRIM69|140691|tripartite motif containing 69##NM_080745|TRIM69|140691|tripartite motif containing 69##NM_182985|TRIM69|140691|tripartite motif containing 69	0.0	
chr19	6354220	6354322	reg1031799.p1	4.406	+	AF347024 BC112122 BC112124 NM_133492	-20671	-	TSC_hg19_v1_chr19_-_6279967 D14539 NM_005934	-74306	-	AB463904 TSC_hg19_v1_chr19_-_6279803	-74468	-	BC002956 NM_006012 TSC_hg19_v1_chr19_+_6361541	7230	+	TSC_hg19_v1_chr19_+_6361559 AK311973 Z50853 EF036491 DQ895823 EU176368	7342	+	AY358858 AY427650 NM_032306	18172	+	AF347024|ACER1|125981|alkaline ceramidase 1##BC112122|ACER1|125981|alkaline ceramidase 1##BC112124|ACER1|125981|alkaline ceramidase 1##NM_133492|ACER1|125981|alkaline ceramidase 1##D14539|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1##NM_005934|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1##BC002956|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##NM_006012|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##AK311973|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##Z50853|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##EF036491|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##DQ895823|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##EU176368|CLPP|8192|ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)##AY358858|ALKBH7|84266|alkB, alkylation repair homolog 7 (E. coli)##AY427650|ALKBH7|84266|alkB, alkylation repair homolog 7 (E. coli)##NM_032306|ALKBH7|84266|alkB, alkylation repair homolog 7 (E. coli)	0.981522	CTCF.p2:3:0.982
chr3	172993697	172993797	reg1031637.p1	4.406	+	BC034496 AF345909 AF404758 AK093041 AX747878 NM_031955	-134739	-	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	-521445	+	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	-525223	+	BC032555 NM_014932	122496	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	1164973	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	1583343	+	BC034496|SPATA16|83893|spermatogenesis associated 16##AF345909|SPATA16|83893|spermatogenesis associated 16##AF404758|SPATA16|83893|spermatogenesis associated 16##AK093041|SPATA16|83893|spermatogenesis associated 16##NM_031955|SPATA16|83893|spermatogenesis associated 16##BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2	0.32775	CTCF.p2:37:0.328
chr7	44678907	44679033	reg1031694.p1	4.406	+	TSC_hg19_v1_chr7_+_44646225 D10523 BC004964 BC014617	-32742	+	TSC_hg19_v1_chr7_+_44646197 AK314179	-32773	+	AK304439 TSC_hg19_v1_chr7_+_44646190	-32778	+	TSC_hg19_v1_chr7_+_44788175 BC110435	109212	+	TSC_hg19_v1_chr7_+_44788465 AK090415 NM_031449	109521	+	NM_174929 BC131780 BC016968 AY426594 AF357908	116847	+	D10523|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC004964|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC014617|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##AK314179|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##AK304439|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2##NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2##NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2	0.0	
chr7	86689350	86689531	reg1015044.p2	4.406	+	TSC_hg19_v1_chr7_-_86688965 NM_001142749	-462	-	AK296250 NM_152748	-94194	-	X77748 TSC_hg19_v1_chr7_+_86274130 DQ315361 DQ315362 DQ315363	-415324	+	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	92273	+	NM_021145 TSC_hg19_v1_chr7_+_86781946 BC070064	92497	+	BT006973 TSC_hg19_v1_chr7_-_86849049 BC002837 NM_024315 AK313794	159501	-	NM_001142749|KIAA1324L|222223|KIAA1324-like##AK296250|KIAA1324L|222223|KIAA1324-like##NM_152748|KIAA1324L|222223|KIAA1324-like##X77748|GRM3|2913|glutamate receptor, metabotropic 3##DQ315361|GRM3|2913|glutamate receptor, metabotropic 3##DQ315362|GRM3|2913|glutamate receptor, metabotropic 3##DQ315363|GRM3|2913|glutamate receptor, metabotropic 3##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_021145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BC070064|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BT006973|C7orf23|79161|chromosome 7 open reading frame 23##BC002837|C7orf23|79161|chromosome 7 open reading frame 23##NM_024315|C7orf23|79161|chromosome 7 open reading frame 23##AK313794|C7orf23|79161|chromosome 7 open reading frame 23	0.0	
chr9	21813720	21813901	reg1000993.p2	4.406	+	TSC_hg19_v1_chr9_+_21802691 CU693136 CR541670 CR541710	-11093	+	BC026106 TSC_hg19_v1_chr9_+_21802660 BC012316 BC018625	-11146	+	TSC_hg19_v1_chr9_+_21802647 AF109294 AY712791 NM_002451 U22233 L40432 AK300592 AK309365	-11170	+	AF115544 NM_058197 TSC_hg19_v1_chr9_-_21974857 DQ318021 L27211	161053	-	NM_000077 NM_001195132	161321	-	BT007020 TSC_hg19_v1_chr9_-_21994352 U26727	180539	-	CR541670|MTAP|4507|methylthioadenosine phosphorylase##CR541710|MTAP|4507|methylthioadenosine phosphorylase##BC026106|MTAP|4507|methylthioadenosine phosphorylase##BC012316|MTAP|4507|methylthioadenosine phosphorylase##BC018625|MTAP|4507|methylthioadenosine phosphorylase##AF109294|MTAP|4507|methylthioadenosine phosphorylase##AY712791|MTAP|4507|methylthioadenosine phosphorylase##NM_002451|MTAP|4507|methylthioadenosine phosphorylase##U22233|MTAP|4507|methylthioadenosine phosphorylase##L40432|MTAP|4507|methylthioadenosine phosphorylase##AK300592|MTAP|4507|methylthioadenosine phosphorylase##AK309365|MTAP|4507|methylthioadenosine phosphorylase##AF115544|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_058197|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##DQ318021|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##L27211|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_000077|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##NM_001195132|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##BT007020|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)##U26727|CDKN2A|1029|cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)	0.0	
chr11	130021214	130021394	reg1033511.p2	4.405	+	TSC_hg19_v1_chr11_+_129991591 L23113	-29676	+	L23114 TSC_hg19_v1_chr11_+_129979349	-41965	+	AK128162 NM_001243299	-80842	+	TSC_hg19_v1_chr11_+_130029676 NM_021978	8373	+	AK314173 TSC_hg19_v1_chr11_+_130029706	8400	+	TSC_hg19_v1_chr11_+_130029713 BC030532	8437	+	L23113|APLP2|334|amyloid beta (A4) precursor-like protein 2##L23114|APLP2|334|amyloid beta (A4) precursor-like protein 2##AK128162|APLP2|334|amyloid beta (A4) precursor-like protein 2##NM_001243299|APLP2|334|amyloid beta (A4) precursor-like protein 2##NM_021978|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##AK314173|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)##BC030532|ST14|6768|suppression of tumorigenicity 14 (colon carcinoma)	0.0	
chr1	45825775	45825956	reg1003428.p2	4.405	+	TSC_hg19_v1_chr1_+_45805883 AK298162 AK093320 BC009364 CU679325 CR457320	-19965	+	AB032924 AB032925 AB032926 AB025227 NM_001048174 AB032927 AB032928 AB032929 NM_001048172 NM_001048173 CU678424 AB590565 AB032920 AB032921 AB032922 AB032923 BC003178 AK293830 NM_001048171 NM_001128425 NM_012222	-19992	-	TSC_hg19_v1_chr1_+_45805845 AK024011	-20036	+	TSC_hg19_v1_chr1_-_45956836 BX648441 AK027573 AK294172 BC022194 AB057597 AJ132545 AK299269 NM_007170 AK302494	130968	-	AK098537 NM_015506 TSC_hg19_v1_chr1_+_45965990 AL080062 BC006122	140074	+	X67951 L19184 TSC_hg19_v1_chr1_-_45987557 AK311898 BC007063 AK131049 BC021683 NM_002574 NM_181696 NM_181697	161713	-	AK298162|TOE1|114034|target of EGR1, member 1 (nuclear)##AK093320|TOE1|114034|target of EGR1, member 1 (nuclear)##BC009364|TOE1|114034|target of EGR1, member 1 (nuclear)##CR457320|TOE1|114034|target of EGR1, member 1 (nuclear)##AB032924|MUTYH|4595|mutY homolog (E. coli)##AB032925|MUTYH|4595|mutY homolog (E. coli)##AB032926|MUTYH|4595|mutY homolog (E. coli)##AB025227|MUTYH|4595|mutY homolog (E. coli)##NM_001048174|MUTYH|4595|mutY homolog (E. coli)##AB032927|MUTYH|4595|mutY homolog (E. coli)##AB032928|MUTYH|4595|mutY homolog (E. coli)##AB032929|MUTYH|4595|mutY homolog (E. coli)##NM_001048172|MUTYH|4595|mutY homolog (E. coli)##NM_001048173|MUTYH|4595|mutY homolog (E. coli)##AB032920|MUTYH|4595|mutY homolog (E. coli)##AB032921|MUTYH|4595|mutY homolog (E. coli)##AB032922|MUTYH|4595|mutY homolog (E. coli)##AB032923|MUTYH|4595|mutY homolog (E. coli)##BC003178|MUTYH|4595|mutY homolog (E. coli)##AK293830|MUTYH|4595|mutY homolog (E. coli)##NM_001048171|MUTYH|4595|mutY homolog (E. coli)##NM_001128425|MUTYH|4595|mutY homolog (E. coli)##NM_012222|MUTYH|4595|mutY homolog (E. coli)##AK024011|TOE1|114034|target of EGR1, member 1 (nuclear)##BX648441|TESK2|10420|testis-specific kinase 2##AK027573|TESK2|10420|testis-specific kinase 2##AK294172|TESK2|10420|testis-specific kinase 2##BC022194|TESK2|10420|testis-specific kinase 2##AB057597|TESK2|10420|testis-specific kinase 2##AJ132545|TESK2|10420|testis-specific kinase 2##AK299269|TESK2|10420|testis-specific kinase 2##NM_007170|TESK2|10420|testis-specific kinase 2##AK302494|TESK2|10420|testis-specific kinase 2##AK098537|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##NM_015506|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##AL080062|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BC006122|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##X67951|PRDX1|5052|peroxiredoxin 1##L19184|PRDX1|5052|peroxiredoxin 1##AK311898|PRDX1|5052|peroxiredoxin 1##BC007063|PRDX1|5052|peroxiredoxin 1##AK131049|PRDX1|5052|peroxiredoxin 1##BC021683|PRDX1|5052|peroxiredoxin 1##NM_002574|PRDX1|5052|peroxiredoxin 1##NM_181696|PRDX1|5052|peroxiredoxin 1##NM_181697|PRDX1|5052|peroxiredoxin 1	0.0	
chr19	3155213	3155352	reg1028695.p2	4.405	+	TSC_hg19_v1_chr19_+_3136030 GU727645 NM_002068 M63904 AK300481 AK291329 BC013585 GU727637	-19138	+	TSC_hg19_v1_chr19_+_3122573 BC051315 CU674752	-32677	+	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	-32889	+	NM_003775 TSC_hg19_v1_chr19_+_3178766 BC014970 AJ000479	23470	+	TSC_hg19_v1_chr19_+_3185896 NM_020170	30596	+	AK172848 TSC_hg19_v1_chr19_+_3185938 AK314044 BC010064 BC019091 BC025926	30662	+	GU727645|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_002068|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##M63904|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK300481|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK291329|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC013585|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##GU727637|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##NM_003775|S1PR4|8698|sphingosine-1-phosphate receptor 4##BC014970|S1PR4|8698|sphingosine-1-phosphate receptor 4##AJ000479|S1PR4|8698|sphingosine-1-phosphate receptor 4##NM_020170|NCLN|56926|nicalin##AK172848|NCLN|56926|nicalin##AK314044|NCLN|56926|nicalin##BC010064|NCLN|56926|nicalin##BC019091|NCLN|56926|nicalin##BC025926|NCLN|56926|nicalin	0.0	
chr6	4727992	4728102	reg1032659.p1	4.405	+	TSC_hg19_v1_chr6_+_4136242 AK092451	-591774	+	BC034702 NM_001166010 TSC_hg19_v1_chr6_-_4135810 AF244138 AF153612 EU832093 EU832185 AF069301 BC033841 AF257175 BC025287 EU832094 EU832186 BC017474 BC008458 AL136642 BC016781 AK222617 BC002668 AK075108 AK223003 AK297049 AK057175 NM_006117 NM_206836	-592282	-	NM_001085401 BC047663 BC066986	-648603	+	TSC_hg19_v1_chr6_+_4776647 AK291601 BC108725 NM_004824	48613	+	TSC_hg19_v1_chr6_+_4776889 BC119682	48874	+	AK296985 NM_001143970	108284	+	AK092451|LOC100507506|100507506|uncharacterized LOC100507506##BC034702|ECI2|10455|enoyl-CoA delta isomerase 2##NM_001166010|ECI2|10455|enoyl-CoA delta isomerase 2##AF244138|ECI2|10455|enoyl-CoA delta isomerase 2##AF153612|ECI2|10455|enoyl-CoA delta isomerase 2##EU832093|ECI2|10455|enoyl-CoA delta isomerase 2##EU832185|ECI2|10455|enoyl-CoA delta isomerase 2##AF069301|ECI2|10455|enoyl-CoA delta isomerase 2##BC033841|ECI2|10455|enoyl-CoA delta isomerase 2##AF257175|ECI2|10455|enoyl-CoA delta isomerase 2##BC025287|ECI2|10455|enoyl-CoA delta isomerase 2##EU832094|ECI2|10455|enoyl-CoA delta isomerase 2##EU832186|ECI2|10455|enoyl-CoA delta isomerase 2##BC017474|ECI2|10455|enoyl-CoA delta isomerase 2##BC008458|ECI2|10455|enoyl-CoA delta isomerase 2##AL136642|ECI2|10455|enoyl-CoA delta isomerase 2##BC016781|ECI2|10455|enoyl-CoA delta isomerase 2##AK222617|ECI2|10455|enoyl-CoA delta isomerase 2##BC002668|ECI2|10455|enoyl-CoA delta isomerase 2##AK075108|ECI2|10455|enoyl-CoA delta isomerase 2##AK223003|ECI2|10455|enoyl-CoA delta isomerase 2##AK297049|ECI2|10455|enoyl-CoA delta isomerase 2##AK057175|ECI2|10455|enoyl-CoA delta isomerase 2##NM_006117|ECI2|10455|enoyl-CoA delta isomerase 2##NM_206836|ECI2|10455|enoyl-CoA delta isomerase 2##NM_001085401|C6orf201|404220|chromosome 6 open reading frame 201##BC047663|C6orf201|404220|chromosome 6 open reading frame 201##BC066986|C6orf201|404220|chromosome 6 open reading frame 201##AK291601|CDYL|9425|chromodomain protein, Y-like##BC108725|CDYL|9425|chromodomain protein, Y-like##NM_004824|CDYL|9425|chromodomain protein, Y-like##BC119682|CDYL|9425|chromodomain protein, Y-like##AK296985|CDYL|9425|chromodomain protein, Y-like##NM_001143970|CDYL|9425|chromodomain protein, Y-like	0.286599	CTCF.p2:-25:0.258
chr9	115427752	115427860	reg1035784.p1	4.405	+	TSC_hg19_v1_chr9_+_115336888 AK056181	-90876	+	BC105048 BC113515 BC143372 BC143424 TSC_hg19_v1_chr9_+_115249466	-178394	+	TSC_hg19_v1_chr9_+_115249149 AK096613 NM_133465	-178644	+	AF161411 TSC_hg19_v1_chr9_-_115480339 AF161409	52532	-	TSC_hg19_v1_chr9_-_115480398 BC065210 AK310007 BC014881 NM_021218 AK000637	52582	-	TSC_hg19_v1_chr9_+_115513056 NM_001012994	85285	+	AK056181|KIAA1958|158405|KIAA1958##BC105048|KIAA1958|158405|KIAA1958##BC113515|KIAA1958|158405|KIAA1958##BC143372|KIAA1958|158405|KIAA1958##BC143424|KIAA1958|158405|KIAA1958##AK096613|KIAA1958|158405|KIAA1958##NM_133465|KIAA1958|158405|KIAA1958##AF161411|C9orf80|58493|chromosome 9 open reading frame 80##AF161409|C9orf80|58493|chromosome 9 open reading frame 80##BC065210|C9orf80|58493|chromosome 9 open reading frame 80##AK310007|C9orf80|58493|chromosome 9 open reading frame 80##BC014881|C9orf80|58493|chromosome 9 open reading frame 80##NM_021218|C9orf80|58493|chromosome 9 open reading frame 80##AK000637|C9orf80|58493|chromosome 9 open reading frame 80##NM_001012994|SNX30|401548|sorting nexin family member 30	0.657751	CTCF.p2:17:0.658
chrX	114966699	114966880	reg1006893.p2	4.405	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-138921	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-169747	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-171183	+	BC003645 TSC_hg19_v1_chrX_-_115085443	118650	-	AK313927 NM_000686 X87723 U16957	335206	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	600978	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr12	54773674	54773828	reg1004479.p2	4.404	+	AF237762 AF282693 TSC_hg19_v1_chr12_-_54758271 BC020614 NM_020370 AK290394	-15501	-	TSC_hg19_v1_chr12_+_54718927 AK223188 BC002849 AB463530 CU678240	-54814	+	TSC_hg19_v1_chr12_+_54718925 AB047848 AF086911	-54826	+	AB528580 CR457327 TSC_hg19_v1_chr12_-_54778374	4585	-	AK296564 TSC_hg19_v1_chr12_-_54778485 AF304052 NM_015481	4723	-	AB593085 TSC_hg19_v1_chr12_-_54779552 AK092724 AY461717	5783	-	AF237762|GPR84|53831|G protein-coupled receptor 84##AF282693|GPR84|53831|G protein-coupled receptor 84##BC020614|GPR84|53831|G protein-coupled receptor 84##NM_020370|GPR84|53831|G protein-coupled receptor 84##AK290394|GPR84|53831|G protein-coupled receptor 84##AK223188|COPZ1|22818|coatomer protein complex, subunit zeta 1##BC002849|COPZ1|22818|coatomer protein complex, subunit zeta 1##AB047848|COPZ1|22818|coatomer protein complex, subunit zeta 1##AF086911|COPZ1|22818|coatomer protein complex, subunit zeta 1##CR457327|ZNF385A|25946|zinc finger protein 385A##AK296564|ZNF385A|25946|zinc finger protein 385A##AF304052|ZNF385A|25946|zinc finger protein 385A##NM_015481|ZNF385A|25946|zinc finger protein 385A##AB593085|ZNF385A|25946|zinc finger protein 385A##AK092724|ZNF385A|25946|zinc finger protein 385A##AY461717|ZNF385A|25946|zinc finger protein 385A	0.0	
chr2	130783651	130783764	reg1031019.p2	4.404	+	NM_032144 AL136727	-46472	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-1707407	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-1855660	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	103151	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	118904	-	TSC_hg19_v1_chr2_-_130929945 BC040941	146294	-	NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B##BC040941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)	0.865274	CTCF.p2:-3:0.865
chr4	127145085	127145209	reg1029515.p1	4.404	+	NM_024582	-907581	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	-1511333	-	AK026960 BC063856 NM_005841	-2824474	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	1408992	+	TSC_hg19_v1_chr4_+_128651573 NM_031291 AL136857 AY550240 BC022032 AB528294 AM393262 CU692468 AJ863129	1506462	+	TSC_hg19_v1_chr4_+_128703445 BC040560 NM_014278	1558286	+	NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##NM_031291|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AL136857|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AY550240|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC022032|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AM393262|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##AJ863129|SLC25A31|83447|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31##BC040560|HSPA4L|22824|heat shock 70kDa protein 4-like##NM_014278|HSPA4L|22824|heat shock 70kDa protein 4-like	0.454185	CTCF.p2:-1:0.454
chr6_ssto_hap7	2675809	2675902	reg1033169.p1	4.404	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr12	15148669	15148804	reg1004073.p1	4.403	+	NM_006205 DQ980604 D45399	-22770	+	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	-34188	-	CU688844 BC030218 AY358536 NM_152321 AK056677	-57275	-	AK311016 BC007997 AK295343 AK313881 NM_001190726 NM_032918	225614	-	NM_002848 NM_030667 TSC_hg19_v1_chr12_+_15475264 AB209729	326524	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	326815	+	NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##BC030218|ERP27|121506|endoplasmic reticulum protein 27##AY358536|ERP27|121506|endoplasmic reticulum protein 27##NM_152321|ERP27|121506|endoplasmic reticulum protein 27##AK056677|ERP27|121506|endoplasmic reticulum protein 27##AK311016|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##BC007997|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK295343|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK313881|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_001190726|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_032918|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AB209729|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	0.0	
chr13	31553722	31553817	reg1012563.p2	4.403	+	TSC_hg19_v1_chr13_+_31506809 BC030277 NM_152325 CU688876	-46939	+	NM_032849 AK055635 TSC_hg19_v1_chr13_+_31480407 AL832478 BC040165 BC101624 BC101626 CU691826	-73289	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	-244054	+	CU691504 DQ891727 DQ894904 AF039695 TSC_hg19_v1_chr13_-_31735849	182025	-	AB003333 TSC_hg19_v1_chr13_-_31736042 BC037553 AB003334 D86956 BC018124 AK314576 AK293955 NM_006644 AK302294 AK303029 AK311464 AK307597	182334	-	TSC_hg19_v1_chr13_+_31774111 NM_194318	220334	+	BC030277|C13orf26|122046|chromosome 13 open reading frame 26##NM_152325|C13orf26|122046|chromosome 13 open reading frame 26##NM_032849|C13orf33|84935|chromosome 13 open reading frame 33##AK055635|C13orf33|84935|chromosome 13 open reading frame 33##BC040165|C13orf33|84935|chromosome 13 open reading frame 33##BC101624|C13orf33|84935|chromosome 13 open reading frame 33##BC101626|C13orf33|84935|chromosome 13 open reading frame 33##BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891727|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ894904|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AF039695|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AB003333|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC037553|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AB003334|HSPH1|10808|heat shock 105kDa/110kDa protein 1##D86956|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC018124|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK314576|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK293955|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_006644|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK302294|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK303029|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK311464|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK307597|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like	0.99281	
chr21	35348225	35348406	reg1010494.p3	4.403	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-60223	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-157645	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-333460	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	97526	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	97614	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	388031	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.0	
chr2	9254698	9254794	reg1028782.p1	4.403	+	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	-110925	-	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	-277027	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-432543	+	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	92146	+	TSC_hg19_v1_chr2_+_9346940 BC063308	92213	+	TSC_hg19_v1_chr2_-_9563308 AK093179	308596	-	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##BC063308|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AK093179|ITGB1BP1|9270|integrin beta 1 binding protein 1	0.0	
chr7	139875242	139875374	reg1004812.p2	4.403	+	BC081541 NM_022750	-111788	-	AL137255 TSC_hg19_v1_chr7_-_139762712 BC044660	-112697	-	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	-346216	+	TSC_hg19_v1_chr7_-_139876751 AB528281 AK131497 NM_030647	1554	-	TSC_hg19_v1_chr7_+_139877154 AK026372	1848	+	AL136583 AL136583 TSC_hg19_v1_chr7_-_140098295 AK299276 BC028380 BC028380 BC046567 BC046567 AK296543 AK300265 AK074823 AK074823 NM_032295 NM_207113	222991	-	BC081541|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##NM_022750|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##AL137255|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##BC044660|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK131497|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)##NM_030647|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)##AK026372|LOC100134229|100134229|uncharacterized LOC100134229##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK299276|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK296543|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK300265|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_032295|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_207113|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	0.0	
chr8	103424877	103425057	reg1026314.p1	4.403	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-56	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-173794	-	NM_001040630	-287833	-	NM_024410 AK315276 BC104456 BC104457	138894	+	BC011538 NM_001032282 S81439	241125	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	242965	-	AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001040630|NCALD|83988|neurocalcin delta##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10	0.0	
chr1	156786587	156786669	reg1028285.p1	4.402	+	AB528908 EU832614 EU832686 AF097744 AK222737 AY763100 AF051325 AJ000553 AY763099 BC012107 AK313706 NM_001161441 NM_001161442 NM_001161444 NM_003975	-59	-	AY763098 NM_001161443	-690	-	AK126428 NM_001007792	-1123	+	AF064078 AK310760 NM_014215	42060	-	M23102 TSC_hg19_v1_chr1_+_156830655 BC136554 BC144239 NM_001012331 NM_002529 AK290759 AK312704 BC062580	44038	+	NM_001080471	76894	+	EU832614|SH2D2A|9047|SH2 domain containing 2A##EU832686|SH2D2A|9047|SH2 domain containing 2A##AF097744|SH2D2A|9047|SH2 domain containing 2A##AK222737|SH2D2A|9047|SH2 domain containing 2A##AY763100|SH2D2A|9047|SH2 domain containing 2A##AF051325|SH2D2A|9047|SH2 domain containing 2A##AJ000553|SH2D2A|9047|SH2 domain containing 2A##AY763099|SH2D2A|9047|SH2 domain containing 2A##BC012107|SH2D2A|9047|SH2 domain containing 2A##AK313706|SH2D2A|9047|SH2 domain containing 2A##NM_001161441|SH2D2A|9047|SH2 domain containing 2A##NM_001161442|SH2D2A|9047|SH2 domain containing 2A##NM_001161444|SH2D2A|9047|SH2 domain containing 2A##NM_003975|SH2D2A|9047|SH2 domain containing 2A##AY763098|SH2D2A|9047|SH2 domain containing 2A##NM_001161443|SH2D2A|9047|SH2 domain containing 2A##AK126428|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001007792|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AF064078|INSRR|3645|insulin receptor-related receptor##AK310760|INSRR|3645|insulin receptor-related receptor##NM_014215|INSRR|3645|insulin receptor-related receptor##M23102|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC136554|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC144239|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001012331|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_002529|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK290759|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK312704|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC062580|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001080471|PEAR1|375033|platelet endothelial aggregation receptor 1	0.0	
chr13	38214738	38214864	reg1032047.p1	4.402	+	EU262883 EU262884 EU262885 EU262886 AY140646 AY918092 BC106709 BC106710 D13666 GU354210 D13665 TSC_hg19_v1_chr13_-_38172906 NM_001135934 NM_001135935 NM_001135936 NM_006475	-41880	-	BC028723 NM_145203	-535001	-	AK292376 TSC_hg19_v1_chr13_-_37633791 AF445026 AF093250 AK225376 AJ130894 BC001145 AK304227 BC030686 NM_001014286 NM_017569	-581088	-	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	229097	-	NM_016617 TSC_hg19_v1_chr13_+_38923946	709150	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	709248	+	EU262883|POSTN|10631|periostin, osteoblast specific factor##EU262884|POSTN|10631|periostin, osteoblast specific factor##EU262885|POSTN|10631|periostin, osteoblast specific factor##EU262886|POSTN|10631|periostin, osteoblast specific factor##AY140646|POSTN|10631|periostin, osteoblast specific factor##AY918092|POSTN|10631|periostin, osteoblast specific factor##BC106709|POSTN|10631|periostin, osteoblast specific factor##BC106710|POSTN|10631|periostin, osteoblast specific factor##D13666|POSTN|10631|periostin, osteoblast specific factor##GU354210|POSTN|10631|periostin, osteoblast specific factor##D13665|POSTN|10631|periostin, osteoblast specific factor##NM_001135934|POSTN|10631|periostin, osteoblast specific factor##NM_001135935|POSTN|10631|periostin, osteoblast specific factor##NM_001135936|POSTN|10631|periostin, osteoblast specific factor##NM_006475|POSTN|10631|periostin, osteoblast specific factor##BC028723|CSNK1A1L|122011|casein kinase 1, alpha 1-like##NM_145203|CSNK1A1L|122011|casein kinase 1, alpha 1-like##AK292376|FAM48A|55578|family with sequence similarity 48, member A##AF445026|FAM48A|55578|family with sequence similarity 48, member A##AF093250|FAM48A|55578|family with sequence similarity 48, member A##AK225376|FAM48A|55578|family with sequence similarity 48, member A##AJ130894|FAM48A|55578|family with sequence similarity 48, member A##BC001145|FAM48A|55578|family with sequence similarity 48, member A##AK304227|FAM48A|55578|family with sequence similarity 48, member A##BC030686|FAM48A|55578|family with sequence similarity 48, member A##NM_001014286|FAM48A|55578|family with sequence similarity 48, member A##NM_017569|FAM48A|55578|family with sequence similarity 48, member A##BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1	0.99315	CTCF.p2:5:0.993
chr3	100915084	100915186	reg1030192.p1	4.402	+	CU688850 EU832117 EU832211 AK025204 AL833204 BC030221 TSC_hg19_v1_chr3_-_100712327 NM_015429	-202845	-	TSC_hg19_v1_chr3_+_100428396 BC041600 BC023599	-486671	+	TSC_hg19_v1_chr3_+_100428385 BC001483 NM_001195478	-486762	+	AF173155 AB593127 NM_016247 DQ980603 DQ980602	124287	-	AM392620 AM393440 TSC_hg19_v1_chr3_-_101232029 AK297356 BC129988 BC062674 BX537943 AL833577 AF199458 NM_001077203 NM_020654	316893	-	TSC_hg19_v1_chr3_+_101280711 BC035967 AF226052 NM_017819 AK000439 AF086243 AF155111	365582	+	EU832117|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##EU832211|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AK025204|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AL833204|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##BC030221|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##NM_015429|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##BC041600|TFG|10342|TRK-fused gene##BC023599|TFG|10342|TRK-fused gene##BC001483|TFG|10342|TRK-fused gene##NM_001195478|TFG|10342|TRK-fused gene##AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AB593127|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7##AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7##AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7##BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7##AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7##AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC035967|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF226052|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##NM_017819|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AK000439|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF086243|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1##AF155111|RG9MTD1|54931|RNA (guanine-9-) methyltransferase domain containing 1	0.900801	CTCF.p2:15:0.901
chr3	167812075	167812255	reg1024104.p1	4.402	+	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-358676	+	BC002506 NM_007217 AF022385 NM_145860 TSC_hg19_v1_chr3_-_167452681 BC016353 NM_145859 AK291130	-359514	-	TSC_hg19_v1_chr3_-_167371732 AK097556	-440442	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	950	-	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	1266	-	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	1051914	-	NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC002506|PDCD10|11235|programmed cell death 10##NM_007217|PDCD10|11235|programmed cell death 10##AF022385|PDCD10|11235|programmed cell death 10##NM_145860|PDCD10|11235|programmed cell death 10##BC016353|PDCD10|11235|programmed cell death 10##NM_145859|PDCD10|11235|programmed cell death 10##AK291130|PDCD10|11235|programmed cell death 10##AK097556|WDR49|151790|WD repeat domain 49##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus	0.0	
chr5	158325317	158325498	reg1023097.p2	4.402	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1039317	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-1141027	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-1154667	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	201050	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	201335	-	AK304228 NM_001199382	309241	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.0	
chr6	135261971	135262063	reg1008649.p1	4.402	+	TSC_hg19_v1_chr6_+_134758857 AK055166	-503169	+	AK055077 NM_001143676	-622822	-	TSC_hg19_v1_chr6_-_134498984 FM205708 AK293383 NM_001143677	-763025	-	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	9215	-	CU674720 EU831981 EU832074 TSC_hg19_v1_chr6_-_135375948 BC040849 AJ420551 BC001465	113871	-	TSC_hg19_v1_chr6_-_135375958 AK024258 AK295545 AF161394 U87791 AJ459826 AJ459827 NM_001145158 NM_001145207 NM_006620	113977	-	AK055166|LOC154092|154092|uncharacterized LOC154092##AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)##EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)##BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)##BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)##AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)##AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)##AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)##U87791|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)	0.0	
chr8	37684162	37684244	reg1024806.p1	4.402	+	TSC_hg19_v1_chr8_+_37654833 AK074099	-29342	+	TSC_hg19_v1_chr8_+_37654778 AF378755 AB385479 AY181242	-29421	+	TSC_hg19_v1_chr8_+_37654406 AB040964 BC146774 AY090637	-29778	+	AB463449 CU679783 EU446514 AF298153 TSC_hg19_v1_chr8_-_37707359	23126	-	TSC_hg19_v1_chr8_-_37707395 AK315420 BC010648 AK001914 AF206673	23183	-	NM_018310 TSC_hg19_v1_chr8_-_37707430 AK294337	23241	-	AK074099|GPR124|25960|G protein-coupled receptor 124##AF378755|GPR124|25960|G protein-coupled receptor 124##AY181242|GPR124|25960|G protein-coupled receptor 124##AB040964|GPR124|25960|G protein-coupled receptor 124##BC146774|GPR124|25960|G protein-coupled receptor 124##AY090637|GPR124|25960|G protein-coupled receptor 124##EU446514|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AF298153|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK315420|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##BC010648|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK001914|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AF206673|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##NM_018310|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK294337|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like	0.0	
chrX	27702071	27702178	reg1029020.p1	4.402	+	AK097561 BC067286 NM_173523	-1491568	+	NM_173699 BC029525 AK057361	-1545638	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-2668051	-	BC157859 NM_001136533	62801	+	AK057527 NM_182506 BC101307 BC101309 BC101310	123991	+	AK128123 NM_001017930	297441	-	AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##NM_139058|ARX|170302|aristaless related homeobox##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	0.959865	CTCF.p2:-1:0.960
chr13	94997725	94997905	reg1029506.p1	4.401	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	-1118388	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-2946911	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-6672946	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	134011	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	250614	-	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	250681	-	NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase	0.05455	
chr20	8516184	8516297	reg1031161.p2	4.401	+	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	-403210	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-515768	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-515833	-	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	533443	+	AK307482 TSC_hg19_v1_chr20_+_9049806	533558	+	NM_182797 BC117458 BC143868	681818	+	AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4	0.808627	CTCF.p2:-3:0.809
chr9	2621270	2621336	reg1034302.p1	4.401	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-606007	+	AF130729 NM_181872	-1570694	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-1570933	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	504	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	771	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	809	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.0	
chr9	6598525	6598696	reg1029390.p1	4.401	+	TSC_hg19_v1_chr9_+_6413338 AF274049 AB071698 EU176286 EU176602 AB385208	-185205	+	TSC_hg19_v1_chr9_+_6413200 AK308433	-185413	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	-185466	+	BC111993 BC111995 M63635 D90239 M64590 AK314156 NM_000170	47017	-	AK310439 NM_001146696	122252	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	159057	+	AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK308433|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC111993|GLDC|2731|glycine dehydrogenase (decarboxylating)##BC111995|GLDC|2731|glycine dehydrogenase (decarboxylating)##M63635|GLDC|2731|glycine dehydrogenase (decarboxylating)##D90239|GLDC|2731|glycine dehydrogenase (decarboxylating)##M64590|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK314156|GLDC|2731|glycine dehydrogenase (decarboxylating)##NM_000170|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C	0.0	
chr10	102822466	102822581	reg1033111.p1	4.400	+	TSC_hg19_v1_chr10_+_102821745 BC007758 AY359087 AK225949 AK172862	-864	+	TSC_hg19_v1_chr10_+_102820998 AK172864 NM_030929	-1545	+	TSC_hg19_v1_chr10_+_102792167 AK299405 BC000124	-30334	+	BC019674 NM_001085398	68379	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	68655	+	BC136321 BC069156 NM_006562 X90828	166179	-	BC007758|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AY359087|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK225949|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172862|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK172864|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##NM_030929|KAZALD1|81621|Kazal-type serine peptidase inhibitor domain 1##AK299405|SFXN3|81855|sideroflexin 3##BC000124|SFXN3|81855|sideroflexin 3##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1	0.536555	CTCF.p2:3:0.407
chr10	126339467	126339582	reg1033780.p1	4.400	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-189103	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-200947	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-232006	-	D50930 TSC_hg19_v1_chr10_-_126432660	93120	-	TSC_hg19_v1_chr10_-_126432823 BC031654	93292	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	93387	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.0	
chr10	71906852	71906969	reg1018519.p2	4.400	+	TSC_hg19_v1_chr10_-_71906457 BC047424 NM_001040273 NM_173555	-430	-	TSC_hg19_v1_chr10_-_71906446 BC030242 AK074968 BC111501 BC042629	-482	-	TSC_hg19_v1_chr10_-_71905958 BC016840	-904	-	TSC_hg19_v1_chr10_-_71930260 AK298591 AK312469 BC003658 AF274026 AF087897 AF217959 AF261717 AY008268 AL136724 NM_001142648 NM_020150	23369	-	AF108211 AB590125 AF217186 DQ893597 AB026723 TSC_hg19_v1_chr10_-_71993148 BC107882 AF154065 BC105034 BC105036 AF092439 AF119665 BC001022 BC061581 AK058193 NM_021129	86243	-	NM_022146	136539	-	BC047424|TYSND1|219743|trypsin domain containing 1##NM_001040273|TYSND1|219743|trypsin domain containing 1##NM_173555|TYSND1|219743|trypsin domain containing 1##BC030242|TYSND1|219743|trypsin domain containing 1##AK074968|TYSND1|219743|trypsin domain containing 1##BC111501|TYSND1|219743|trypsin domain containing 1##BC042629|TYSND1|219743|trypsin domain containing 1##BC016840|TYSND1|219743|trypsin domain containing 1##AK298591|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AK312469|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##BC003658|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF274026|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF087897|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF217959|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF261717|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AY008268|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AL136724|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##NM_001142648|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##NM_020150|SAR1A|56681|SAR1 homolog A (S. cerevisiae)##AF108211|PPA1|5464|pyrophosphatase (inorganic) 1##AF217186|PPA1|5464|pyrophosphatase (inorganic) 1##DQ893597|PPA1|5464|pyrophosphatase (inorganic) 1##AB026723|PPA1|5464|pyrophosphatase (inorganic) 1##BC107882|PPA1|5464|pyrophosphatase (inorganic) 1##AF154065|PPA1|5464|pyrophosphatase (inorganic) 1##BC105034|PPA1|5464|pyrophosphatase (inorganic) 1##BC105036|PPA1|5464|pyrophosphatase (inorganic) 1##AF092439|PPA1|5464|pyrophosphatase (inorganic) 1##AF119665|PPA1|5464|pyrophosphatase (inorganic) 1##BC001022|PPA1|5464|pyrophosphatase (inorganic) 1##BC061581|PPA1|5464|pyrophosphatase (inorganic) 1##AK058193|PPA1|5464|pyrophosphatase (inorganic) 1##NM_021129|PPA1|5464|pyrophosphatase (inorganic) 1##NM_022146|NPFFR1|64106|neuropeptide FF receptor 1	0.544196	CTCF.p2:8:0.544
chr11	36724630	36724810	reg1001054.p2	4.400	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-104918	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-108616	+	NM_000448 M29474	-135152	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	3589874	-	AB046800 NM_020929	3590943	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	6608798	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.0	
chr17	57297828	57297967	reg1031828.p2	4.400	+	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	-10500	+	AK225380 TSC_hg19_v1_chr17_+_57233106 AK001891 AK225377 FJ161961 BC008669	-64777	+	NM_018304	-65038	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	1	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	111121	+	AF461690 NM_001166301 NM_024612 TSC_hg19_v1_chr17_+_57642970 BC024187 AK299151 AK095681 AF260270 AK226048 AB384723 DQ890909 DQ894060	345090	+	AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK225380|PRR11|55771|proline rich 11##AK001891|PRR11|55771|proline rich 11##AK225377|PRR11|55771|proline rich 11##FJ161961|PRR11|55771|proline rich 11##BC008669|PRR11|55771|proline rich 11##NM_018304|PRR11|55771|proline rich 11##NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)##AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40	0.010708	
chr5	150843119	150843265	reg1030559.p1	4.400	+	TSC_hg19_v1_chr5_+_150827239 AY162213 BC136437 BC136438	-15948	+	AK309323 TSC_hg19_v1_chr5_+_150827187	-16003	+	TSC_hg19_v1_chr5_+_150827163 NM_078483 BX537963 AY227111	-16032	+	AF231022 NM_001447	105312	-	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	223269	-	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	223316	-	AY162213|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136437|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BC136438|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AK309323|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##NM_078483|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##BX537963|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AY227111|SLC36A1|206358|solute carrier family 36 (proton/amino acid symporter), member 1##AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)	0.382069	CTCF.p2:-13:0.382
chr1	160752184	160752355	reg1026995.p2	4.399	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-43205	+	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	-70683	-	AK314244 NM_003037 BC012602	-135206	-	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	13729	+	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	80309	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	102689	-	AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)	0.0	
chr2	33259945	33260040	reg1032113.p1	4.399	+	NM_206943	-87624	+	NM_001193509 NM_017735 AK299196 BC063791 TSC_hg19_v1_chr2_+_32853177 AK027570	-406858	+	TSC_hg19_v1_chr2_+_32582308 AF265555	-677682	+	TSC_hg19_v1_chr2_+_33359657 NM_000627 NM_001166264 NM_001166265 NM_001166266 AB208801 BC130289 BC144127 BC144128 M34057 AB384737 AF489528	99713	+	AK125551 TSC_hg19_v1_chr2_+_33661417 BC027849 NM_170672 AK292983	401456	+	NM_001139488	441328	+	NM_206943|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001193509|TTC27|55622|tetratricopeptide repeat domain 27##NM_017735|TTC27|55622|tetratricopeptide repeat domain 27##AK299196|TTC27|55622|tetratricopeptide repeat domain 27##BC063791|TTC27|55622|tetratricopeptide repeat domain 27##AK027570|TTC27|55622|tetratricopeptide repeat domain 27##AF265555|BIRC6|57448|baculoviral IAP repeat containing 6##NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1##AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1##M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1##AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1##AK125551|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC027849|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_170672|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK292983|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_001139488|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)	0.423117	CTCF.p2:-18:0.423
chr7	110723585	110723766	reg1034054.p2	4.399	+	NM_001024607	-2199039	-	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-2513301	+	TSC_hg19_v1_chr7_+_108210292 AK092204	-2513377	+	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	7448	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	478809	-	TSC_hg19_v1_chr7_-_111428948 AK294820	705336	-	NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AK092204|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK294820|DOCK4|9732|dedicator of cytokinesis 4	0.0	
chr7	114045623	114045738	reg1030733.p1	4.399	+	TSC_hg19_v1_chr7_+_113726599 CR749236	-319077	+	TSC_hg19_v1_chr7_+_113726514 AF454830	-319177	+	TSC_hg19_v1_chr7_+_113726381 AK131266	-319259	+	TSC_hg19_v1_chr7_+_114055117 AY144615 BC018016 NM_001172766 NM_014491 NM_148898 NM_148900	9417	+	AK296957 TSC_hg19_v1_chr7_+_114055213	9512	+	TSC_hg19_v1_chr7_+_114055253 AF493430 AF337817 AF467257 BC126104 BC143866 BC143867	9625	+	CR749236|FOXP2|93986|forkhead box P2##AF454830|FOXP2|93986|forkhead box P2##AK131266|FOXP2|93986|forkhead box P2##AY144615|FOXP2|93986|forkhead box P2##BC018016|FOXP2|93986|forkhead box P2##NM_001172766|FOXP2|93986|forkhead box P2##NM_014491|FOXP2|93986|forkhead box P2##NM_148898|FOXP2|93986|forkhead box P2##NM_148900|FOXP2|93986|forkhead box P2##AK296957|FOXP2|93986|forkhead box P2##AF493430|FOXP2|93986|forkhead box P2##AF337817|FOXP2|93986|forkhead box P2##AF467257|FOXP2|93986|forkhead box P2##BC126104|FOXP2|93986|forkhead box P2##BC143866|FOXP2|93986|forkhead box P2##BC143867|FOXP2|93986|forkhead box P2	0.016878	
chr1	2071318	2071445	reg1019931.p1	4.398	+	NM_001033582	-35227	+	NM_001242874 AK294782	-65914	+	AK294649 NM_001033581	-66297	+	TSC_hg19_v1_chr1_-_2126212 BC041041 AF469129 BC066360 AK055593 BC103992 NM_182533	54798	-	AK127994 NM_001146310	67790	-	NM_003036 X15218 TSC_hg19_v1_chr1_+_2160159	88788	+	NM_001033582|PRKCZ|5590|protein kinase C, zeta##NM_001242874|PRKCZ|5590|protein kinase C, zeta##AK294782|PRKCZ|5590|protein kinase C, zeta##AK294649|PRKCZ|5590|protein kinase C, zeta##NM_001033581|PRKCZ|5590|protein kinase C, zeta##BC041041|C1orf86|199990|chromosome 1 open reading frame 86##AF469129|C1orf86|199990|chromosome 1 open reading frame 86##BC066360|C1orf86|199990|chromosome 1 open reading frame 86##AK055593|C1orf86|199990|chromosome 1 open reading frame 86##BC103992|C1orf86|199990|chromosome 1 open reading frame 86##NM_182533|C1orf86|199990|chromosome 1 open reading frame 86##AK127994|C1orf86|199990|chromosome 1 open reading frame 86##NM_001146310|C1orf86|199990|chromosome 1 open reading frame 86##NM_003036|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##X15218|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)	0.951643	CTCF.p2:-6:0.952
chr1	233595251	233595432	reg1020244.p1	4.398	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	-131758	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	-163858	-	TSC_hg19_v1_chr1_+_233086381 AF416713	-508952	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	154482	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	154578	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	445271	+	AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3	0.0	
chr15	62998693	62998818	reg1030347.p1	4.398	+	AF402000 NM_015059	-59246	+	TSC_hg19_v1_chr15_+_62682748 AB621808	-316037	+	NM_001007595	-541274	-	TSC_hg19_v1_chr15_+_63050761 BX648144 BX648146	52019	+	TSC_hg19_v1_chr15_+_63334949 NM_000366 NM_001018004 NM_001018005 NM_001018006 NM_001018007 NM_001018020 AK092051 AX747334 BC007433 AK057989 AK299387 AK129882 AK131384 AK309170 AL050179 M19713 DQ893259 DQ896588 CU675655 AY640414 AY640415	336147	+	M19714 TSC_hg19_v1_chr15_+_63335095	336335	+	AF402000|TLN2|83660|talin 2##NM_015059|TLN2|83660|talin 2##AB621808|TLN2|83660|talin 2##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B##BX648144|TLN2|83660|talin 2##BX648146|TLN2|83660|talin 2##NM_000366|TPM1|7168|tropomyosin 1 (alpha)##NM_001018004|TPM1|7168|tropomyosin 1 (alpha)##NM_001018005|TPM1|7168|tropomyosin 1 (alpha)##NM_001018006|TPM1|7168|tropomyosin 1 (alpha)##NM_001018007|TPM1|7168|tropomyosin 1 (alpha)##NM_001018020|TPM1|7168|tropomyosin 1 (alpha)##AK092051|TPM1|7168|tropomyosin 1 (alpha)##BC007433|TPM1|7168|tropomyosin 1 (alpha)##AK057989|TPM1|7168|tropomyosin 1 (alpha)##AK299387|TPM1|7168|tropomyosin 1 (alpha)##AK129882|TPM1|7168|tropomyosin 1 (alpha)##AK131384|TPM1|7168|tropomyosin 1 (alpha)##AK309170|TPM1|7168|tropomyosin 1 (alpha)##AL050179|TPM1|7168|tropomyosin 1 (alpha)##M19713|TPM1|7168|tropomyosin 1 (alpha)##DQ893259|TPM1|7168|tropomyosin 1 (alpha)##DQ896588|TPM1|7168|tropomyosin 1 (alpha)##AY640414|TPM1|7168|tropomyosin 1 (alpha)##AY640415|TPM1|7168|tropomyosin 1 (alpha)##M19714|TPM1|7168|tropomyosin 1 (alpha)	0.989285	CTCF.p2:14:0.989
chr15	64926375	64926555	reg1031619.p2	4.398	+	AB056456 TSC_hg19_v1_chr15_+_64885153	-41312	+	NM_015042	-134847	+	TSC_hg19_v1_chr15_+_64752786 BC142647	-173606	+	BC119629 BC119630 BC148316 BC127630 TSC_hg19_v1_chr15_-_64995360 BC127631 AF242520 AF242521	68895	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	68937	-	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	69004	-	NM_015042|ZNF609|23060|zinc finger protein 609##BC142647|ZNF609|23060|zinc finger protein 609##BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2##BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2	0.0	
chr16	87454357	87454476	reg1032733.p2	4.398	+	TSC_hg19_v1_chr16_+_87425998 AF303888 AM393561 DQ893152 DQ896448 AB528176 AL834298	-28402	+	TSC_hg19_v1_chr16_+_87425947 AK025556 BC067797 BC018634	-28453	+	TSC_hg19_v1_chr16_+_87425938 AK290956 BC048009 AK310224 AK310335 AF087871 AF183417	-28507	+	AB011151 AB384500 NM_015144 AB030243 BC101478	70974	-	AB593088 TSC_hg19_v1_chr16_+_87636492 NM_020655 BC036533	182085	+	TSC_hg19_v1_chr16_+_87636574 AB042636	182162	+	AF303888|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AM393561|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ893152|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ896448|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AL834298|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK025556|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC067797|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC018634|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK290956|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC048009|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK310224|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK310335|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AF087871|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AF183417|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AB011151|ZCCHC14|23174|zinc finger, CCHC domain containing 14##NM_015144|ZCCHC14|23174|zinc finger, CCHC domain containing 14##AB030243|ZCCHC14|23174|zinc finger, CCHC domain containing 14##BC101478|ZCCHC14|23174|zinc finger, CCHC domain containing 14##NM_020655|JPH3|57338|junctophilin 3##BC036533|JPH3|57338|junctophilin 3##AB042636|JPH3|57338|junctophilin 3	0.877072	CTCF.p2:10:0.877
chr18	60809122	60809302	reg1027336.p1	4.398	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-13277	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-424904	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-425286	+	BC027258 NM_000633 NM_000657	177348	-	TSC_hg19_v1_chr18_-_60986977 X06487	177781	-	TSC_hg19_v1_chr18_-_60987309 M13994	178074	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr19	11909112	11909216	reg1005620.p3	4.398	+	NM_152355 TSC_hg19_v1_chr19_+_11877884 AK095956	-31304	+	X51760 BC052597 AK308189 NM_001080493 AK300579 AK303213	-59406	-	NM_145295 BC098416 AK095639 BC006279 AK074846 BC069232	-200873	+	AK297479 NM_152356 AK096593	215	+	TSC_hg19_v1_chr19_+_11925098 AK095252 NM_152357 BC035760	15942	+	AL833935 NM_152262	67679	+	NM_152355|ZNF441|126068|zinc finger protein 441##AK095956|ZNF441|126068|zinc finger protein 441##X51760|ZNF823|55552|zinc finger protein 823##BC052597|ZNF823|55552|zinc finger protein 823##AK308189|ZNF823|55552|zinc finger protein 823##NM_001080493|ZNF823|55552|zinc finger protein 823##AK300579|ZNF823|55552|zinc finger protein 823##AK303213|ZNF823|55552|zinc finger protein 823##NM_145295|ZNF627|199692|zinc finger protein 627##BC098416|ZNF627|199692|zinc finger protein 627##AK095639|ZNF627|199692|zinc finger protein 627##BC006279|ZNF627|199692|zinc finger protein 627##AK074846|ZNF627|199692|zinc finger protein 627##BC069232|ZNF627|199692|zinc finger protein 627##AK297479|ZNF491|126069|zinc finger protein 491##NM_152356|ZNF491|126069|zinc finger protein 491##AK096593|ZNF491|126069|zinc finger protein 491##AK095252|ZNF440|126070|zinc finger protein 440##NM_152357|ZNF440|126070|zinc finger protein 440##BC035760|ZNF440|126070|zinc finger protein 440##AL833935|ZNF439|90594|zinc finger protein 439##NM_152262|ZNF439|90594|zinc finger protein 439	0.0	
chr19	18313669	18313777	reg1029460.p1	4.398	+	TSC_hg19_v1_chr19_+_18304077 NM_032683 BC093008 BC005064 BC028146 AF320622 AF416712 AK094091	-9688	+	TSC_hg19_v1_chr19_+_18284633 AB590284 CU676848 CU689078 DQ884410 DQ892016 DQ895206	-29082	+	TSC_hg19_v1_chr19_+_18284622 BC021136 BC031020 AF097362	-29102	+	M28210 TSC_hg19_v1_chr19_-_18314858 AF254795 BC011782 AK293467 AK289559 NM_002866	1081	-	NM_001098819 U88712	21579	-	AK300888 AK300983 TSC_hg19_v1_chr19_-_18337249 NM_001098818 U88713	23536	-	NM_032683|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC093008|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC005064|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC028146|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AF320622|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AF416712|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AK094091|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##DQ884410|IFI30|10437|interferon, gamma-inducible protein 30##DQ892016|IFI30|10437|interferon, gamma-inducible protein 30##DQ895206|IFI30|10437|interferon, gamma-inducible protein 30##BC021136|IFI30|10437|interferon, gamma-inducible protein 30##BC031020|IFI30|10437|interferon, gamma-inducible protein 30##M28210|RAB3A|5864|RAB3A, member RAS oncogene family##AF254795|RAB3A|5864|RAB3A, member RAS oncogene family##BC011782|RAB3A|5864|RAB3A, member RAS oncogene family##AK293467|RAB3A|5864|RAB3A, member RAS oncogene family##AK289559|RAB3A|5864|RAB3A, member RAS oncogene family##NM_002866|RAB3A|5864|RAB3A, member RAS oncogene family##NM_001098819|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U88712|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK300888|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK300983|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##NM_001098818|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U88713|PDE4C|5143|phosphodiesterase 4C, cAMP-specific	1.021818	CTCF.p2:-11:0.996
chr3	62117418	62117507	reg1031240.p1	4.398	+	AB055764 TSC_hg19_v1_chr3_-_61728812	-388651	-	L09247 AB385117 TSC_hg19_v1_chr3_+_61548071	-569486	+	BC047734 TSC_hg19_v1_chr3_+_61547294	-570176	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	187244	+	BC017772 NM_020685	187933	+	AK290464 NM_018008	241727	-	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2	0.201	CTCF.p2:15:0.201
chr4	164585116	164585248	reg1034125.p2	4.398	+	AB463878 AK000675 AK301408 NM_017923	-50467	-	TSC_hg19_v1_chr4_+_164415868 BC011842	-169309	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-169340	+	NM_012403	533680	-	AK289711 NM_001166373	719224	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	1292920	+	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39	0.0	
chr4	2916119	2916245	reg1030996.p1	4.398	+	AK025413 TSC_hg19_v1_chr4_+_2883766	-32481	+	TSC_hg19_v1_chr4_+_2845627 AH004561 S70310 BC013393 AK309186	-70516	+	TSC_hg19_v1_chr4_+_2845589 NM_001119 NM_014189 NM_014190 NM_176801	-70603	+	CU677155 EU176393 EU176739 L11669 TSC_hg19_v1_chr4_-_2935840	19565	-	TSC_hg19_v1_chr4_-_2935854 NM_001120	19725	-	TSC_hg19_v1_chr4_-_2936515 BC001502 BC014979	20305	-	AK025413|ADD1|118|adducin 1 (alpha)##S70310|ADD1|118|adducin 1 (alpha)##BC013393|ADD1|118|adducin 1 (alpha)##AK309186|ADD1|118|adducin 1 (alpha)##NM_001119|ADD1|118|adducin 1 (alpha)##NM_014189|ADD1|118|adducin 1 (alpha)##NM_014190|ADD1|118|adducin 1 (alpha)##NM_176801|ADD1|118|adducin 1 (alpha)##EU176393|MFSD10|10227|major facilitator superfamily domain containing 10##EU176739|MFSD10|10227|major facilitator superfamily domain containing 10##L11669|MFSD10|10227|major facilitator superfamily domain containing 10##NM_001120|MFSD10|10227|major facilitator superfamily domain containing 10##BC001502|MFSD10|10227|major facilitator superfamily domain containing 10##BC014979|MFSD10|10227|major facilitator superfamily domain containing 10	0.0	
chr5	86720780	86720891	reg1032159.p1	4.398	+	TSC_hg19_v1_chr5_-_86708756 NM_001239	-12033	-	CU675079 CU677687 CU692576 AB590163 CR407658 DQ892550 DQ895761 U12685 TSC_hg19_v1_chr5_-_86708717 U11791 BC022351 BC016823 BC016705 AK291720 BC005280 BX537673 NM_001199189	-12170	-	TSC_hg19_v1_chr5_-_86703928 AK094534	-16874	-	BX647345 AK299896 AK300893 AK301091 AY358693 BC037287 NM_153354 AK294520	843809	-	TSC_hg19_v1_chr5_+_87564773 BC030122	843921	+	BC047059 TSC_hg19_v1_chr5_+_87564842	844014	+	NM_001239|CCNH|902|cyclin H##CR407658|CCNH|902|cyclin H##DQ892550|CCNH|902|cyclin H##DQ895761|CCNH|902|cyclin H##U12685|CCNH|902|cyclin H##U11791|CCNH|902|cyclin H##BC022351|CCNH|902|cyclin H##BC016823|CCNH|902|cyclin H##BC016705|CCNH|902|cyclin H##AK291720|CCNH|902|cyclin H##BC005280|CCNH|902|cyclin H##BX537673|CCNH|902|cyclin H##NM_001199189|CCNH|902|cyclin H##AK094534|CCNH|902|cyclin H##BX647345|TMEM161B|153396|transmembrane protein 161B##AK299896|TMEM161B|153396|transmembrane protein 161B##AK300893|TMEM161B|153396|transmembrane protein 161B##AK301091|TMEM161B|153396|transmembrane protein 161B##AY358693|TMEM161B|153396|transmembrane protein 161B##BC037287|TMEM161B|153396|transmembrane protein 161B##NM_153354|TMEM161B|153396|transmembrane protein 161B##BC030122|LOC100505894|100505894|uncharacterized LOC100505894##BC047059|LOC100505894|100505894|uncharacterized LOC100505894	0.381069	CTCF.p2:2:0.381
chr9	140196711	140196822	reg1009227.p1	4.398	+	BC053618 NM_001004354 TSC_hg19_v1_chr9_-_140196724	-46	-	TSC_hg19_v1_chr9_+_140172277 AK000252 NM_017723	-24481	+	TSC_hg19_v1_chr9_+_140149888 AF464935 AB384577 AM393289	-46843	+	BC065002 TSC_hg19_v1_chr9_-_140317615 BC110879 AK000440 AK094438 BC039252 BC037355	120844	-	TSC_hg19_v1_chr9_-_140317652 BC033079 BC069205	120910	-	NM_017820 TSC_hg19_v1_chr9_-_140317724	120952	-	BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein##NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein##AK000252|C9orf167|54863|chromosome 9 open reading frame 167##NM_017723|C9orf167|54863|chromosome 9 open reading frame 167##AF464935|COBRA1|25920|cofactor of BRCA1##AM393289|COBRA1|25920|cofactor of BRCA1##BC065002|EXD3|54932|exonuclease 3'-5' domain containing 3##BC110879|EXD3|54932|exonuclease 3'-5' domain containing 3##AK000440|EXD3|54932|exonuclease 3'-5' domain containing 3##AK094438|EXD3|54932|exonuclease 3'-5' domain containing 3##BC039252|EXD3|54932|exonuclease 3'-5' domain containing 3##BC037355|EXD3|54932|exonuclease 3'-5' domain containing 3##BC033079|EXD3|54932|exonuclease 3'-5' domain containing 3##BC069205|EXD3|54932|exonuclease 3'-5' domain containing 3##NM_017820|EXD3|54932|exonuclease 3'-5' domain containing 3	0.415442	CTCF.p2:63:0.415
chrY	59152953	59153052	reg1026566.p1	4.398	+	AK289543 AK311508 NM_005840 AK125483	-52562	+	AK292375 BC033041 NM_001003894 NM_001003895 NM_004680 NM_170723 AK292318 AF000981 AF080597	-31384728	+	AF000980 NM_001002760 NM_001002761 NM_004678	-31954752	-	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	60995	+	M84747 NM_002186 AK303178 BC025298 BC051337 S71404 CU690808	177345	+	None	None	None	AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK292375|CDY1|9085|chromodomain protein, Y-linked, 1##BC033041|CDY1|9085|chromodomain protein, Y-linked, 1##NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1##NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1##AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B##AF000981|CDY1|9085|chromodomain protein, Y-linked, 1##AF080597|CDY1|9085|chromodomain protein, Y-linked, 1##AF000980|BPY2|9083|basic charge, Y-linked, 2##NM_001002760|BPY2B|442867|basic charge, Y-linked, 2B##NM_001002761|BPY2C|442868|basic charge, Y-linked, 2C##NM_004678|BPY2|9083|basic charge, Y-linked, 2##NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7##M84747|IL9R|3581|interleukin 9 receptor##NM_002186|IL9R|3581|interleukin 9 receptor##AK303178|IL9R|3581|interleukin 9 receptor##BC025298|IL9R|3581|interleukin 9 receptor##BC051337|IL9R|3581|interleukin 9 receptor##S71404|IL9R|3581|interleukin 9 receptor	0.053577	
chr11	3070743	3070923	reg1012164.p1	4.397	+	TSC_hg19_v1_chr11_-_3013610 NM_005969 U77456 AK312599	-57234	-	AK316324 TSC_hg19_v1_chr11_-_3013560	-57278	-	TSC_hg19_v1_chr11_-_3013522 AK299515	-57308	-	BT009913 CU678270 DQ890773 AK308005 TSC_hg19_v1_chr11_-_3078625 AB208814 AF288206 AF288207 AK222614 AK296763 AK131221 AK096313 AK295371 AK298514 AK302644 BX647906 AK289432 BC002880 NM_001014437 NM_001194997 NM_001751 NM_139273	7805	-	AK301003 TSC_hg19_v1_chr11_-_3147850	77010	-	TSC_hg19_v1_chr11_-_3186504 BC032646 BC039579 AF392453 AL136918	115656	-	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4##U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4##BT009913|CARS|833|cysteinyl-tRNA synthetase##DQ890773|CARS|833|cysteinyl-tRNA synthetase##AK308005|CARS|833|cysteinyl-tRNA synthetase##AB208814|CARS|833|cysteinyl-tRNA synthetase##AF288206|CARS|833|cysteinyl-tRNA synthetase##AF288207|CARS|833|cysteinyl-tRNA synthetase##AK222614|CARS|833|cysteinyl-tRNA synthetase##AK296763|CARS|833|cysteinyl-tRNA synthetase##AK131221|CARS|833|cysteinyl-tRNA synthetase##AK096313|CARS|833|cysteinyl-tRNA synthetase##AK295371|CARS|833|cysteinyl-tRNA synthetase##AK298514|CARS|833|cysteinyl-tRNA synthetase##AK302644|CARS|833|cysteinyl-tRNA synthetase##BX647906|CARS|833|cysteinyl-tRNA synthetase##AK289432|CARS|833|cysteinyl-tRNA synthetase##BC002880|CARS|833|cysteinyl-tRNA synthetase##NM_001014437|CARS|833|cysteinyl-tRNA synthetase##NM_001194997|CARS|833|cysteinyl-tRNA synthetase##NM_001751|CARS|833|cysteinyl-tRNA synthetase##NM_139273|CARS|833|cysteinyl-tRNA synthetase##AK301003|OSBPL5|114879|oxysterol binding protein-like 5##BC032646|OSBPL5|114879|oxysterol binding protein-like 5##BC039579|OSBPL5|114879|oxysterol binding protein-like 5##AF392453|OSBPL5|114879|oxysterol binding protein-like 5##AL136918|OSBPL5|114879|oxysterol binding protein-like 5	0.0	
chr1	158853369	158853501	reg1029843.p2	4.397	+	TSC_hg19_v1_chr1_+_158801140 BC020715 BC032319 AK290392 AK313210 M81750 NM_002432	-52299	+	NM_001005278	-106011	-	NM_001005185 BC146847	-116954	-	NM_152501 NM_198928 NM_198929 NM_198930 AY185344 AY185345 AY185346 AY185347 BC090944 AK308350 BC020822 BC073133 BC114470 BC139741	47924	+	NM_001206567 NM_005531 TSC_hg19_v1_chr1_+_158979716 AF208043 M63838 AB208989 BC017059 AF086545 AK296228 AK307957	126355	+	AK292042 BC010940 AF024714 NM_004833	193165	-	BC020715|MNDA|4332|myeloid cell nuclear differentiation antigen##BC032319|MNDA|4332|myeloid cell nuclear differentiation antigen##AK290392|MNDA|4332|myeloid cell nuclear differentiation antigen##AK313210|MNDA|4332|myeloid cell nuclear differentiation antigen##M81750|MNDA|4332|myeloid cell nuclear differentiation antigen##NM_002432|MNDA|4332|myeloid cell nuclear differentiation antigen##NM_001005278|OR6N2|81442|olfactory receptor, family 6, subfamily N, member 2##NM_001005185|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1##BC146847|OR6N1|128372|olfactory receptor, family 6, subfamily N, member 1##NM_152501|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198928|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198929|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_198930|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185344|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185345|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185346|PYHIN1|149628|pyrin and HIN domain family, member 1##AY185347|PYHIN1|149628|pyrin and HIN domain family, member 1##BC090944|PYHIN1|149628|pyrin and HIN domain family, member 1##AK308350|PYHIN1|149628|pyrin and HIN domain family, member 1##BC020822|PYHIN1|149628|pyrin and HIN domain family, member 1##BC073133|PYHIN1|149628|pyrin and HIN domain family, member 1##BC114470|PYHIN1|149628|pyrin and HIN domain family, member 1##BC139741|PYHIN1|149628|pyrin and HIN domain family, member 1##NM_001206567|IFI16|3428|interferon, gamma-inducible protein 16##NM_005531|IFI16|3428|interferon, gamma-inducible protein 16##AF208043|IFI16|3428|interferon, gamma-inducible protein 16##M63838|IFI16|3428|interferon, gamma-inducible protein 16##AB208989|IFI16|3428|interferon, gamma-inducible protein 16##BC017059|IFI16|3428|interferon, gamma-inducible protein 16##AF086545|IFI16|3428|interferon, gamma-inducible protein 16##AK296228|IFI16|3428|interferon, gamma-inducible protein 16##AK307957|IFI16|3428|interferon, gamma-inducible protein 16##AK292042|AIM2|9447|absent in melanoma 2##BC010940|AIM2|9447|absent in melanoma 2##AF024714|AIM2|9447|absent in melanoma 2##NM_004833|AIM2|9447|absent in melanoma 2	0.413164	CTCF.p2:-41:0.413
chr1	210465963	210466089	reg1032399.p1	4.397	+	BC012083 NM_019605 AK096381	-59815	+	AJ617623 TSC_hg19_v1_chr1_+_210111595 AK091517 AX747035 BC130323 BC144154 BC144155 BC144157 AJ617625	-354437	+	NM_001146261 NM_001146262 NM_001146264 NM_153262 TSC_hg19_v1_chr1_+_210111559	-354476	+	NM_001122834 NM_001170564 AK297193	35570	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	36239	+	NM_001170580 BC051191	36615	+	BC012083|SERTAD4|56256|SERTA domain containing 4##NM_019605|SERTAD4|56256|SERTA domain containing 4##AK096381|SERTAD4|56256|SERTA domain containing 4##AJ617623|SYT14|255928|synaptotagmin XIV##AK091517|SYT14|255928|synaptotagmin XIV##BC130323|SYT14|255928|synaptotagmin XIV##BC144154|SYT14|255928|synaptotagmin XIV##BC144155|SYT14|255928|synaptotagmin XIV##BC144157|SYT14|255928|synaptotagmin XIV##AJ617625|SYT14|255928|synaptotagmin XIV##NM_001146261|SYT14|255928|synaptotagmin XIV##NM_001146262|SYT14|255928|synaptotagmin XIV##NM_001146264|SYT14|255928|synaptotagmin XIV##NM_153262|SYT14|255928|synaptotagmin XIV##NM_001122834|HHAT|55733|hedgehog acyltransferase##NM_001170564|HHAT|55733|hedgehog acyltransferase##AK297193|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase##NM_001170580|HHAT|55733|hedgehog acyltransferase##BC051191|HHAT|55733|hedgehog acyltransferase	0.858306	CTCF.p2:-6:0.858
chr13	30969093	30969220	reg1032364.p1	4.397	+	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-87587	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	-88005	-	TSC_hg19_v1_chr13_-_30424811 NM_007106	-544315	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	70837	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	70902	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	222471	-	AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##NM_007106|UBL3|5412|ubiquitin-like 3##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1	0.0	
chr16	11319336	11319485	reg1027303.p2	4.397	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-280967	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-283175	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-283244	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	30640	-	X63758 BC096135 BC096136 BC096137 NM_005425	43728	-	NM_021247	48041	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr19	55713732	55713863	reg1033565.p1	4.397	+	AK125182 TSC_hg19_v1_chr19_-_55691510 AK313067 BC033683 BC046157 BC029962 NM_003180	-22204	-	TSC_hg19_v1_chr19_-_55690722 AK295337	-23060	-	BC016843 TSC_hg19_v1_chr19_-_55677985 BC063449 AK097388 AK093458 AX748139 NM_178837	-35814	-	TSC_hg19_v1_chr19_-_55720815 BC111715 BC111716 D15049 AK097257 NM_001161440 NM_002842	7067	-	BC023000 NM_173804	26834	-	TSC_hg19_v1_chr19_-_55767132 AK297152	53329	-	AK125182|SYT5|6861|synaptotagmin V##AK313067|SYT5|6861|synaptotagmin V##BC033683|SYT5|6861|synaptotagmin V##BC046157|SYT5|6861|synaptotagmin V##BC029962|SYT5|6861|synaptotagmin V##NM_003180|SYT5|6861|synaptotagmin V##AK295337|SYT5|6861|synaptotagmin V##BC016843|C19orf51|352909|chromosome 19 open reading frame 51##BC063449|C19orf51|352909|chromosome 19 open reading frame 51##AK097388|C19orf51|352909|chromosome 19 open reading frame 51##AK093458|C19orf51|352909|chromosome 19 open reading frame 51##NM_178837|C19orf51|352909|chromosome 19 open reading frame 51##BC111715|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##BC111716|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##D15049|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##AK097257|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##NM_001161440|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##NM_002842|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##BC023000|TMEM86B|255043|transmembrane protein 86B##NM_173804|TMEM86B|255043|transmembrane protein 86B##AK297152|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1	0.980163	CTCF.p2:-22:0.980
chr20	6138130	6138237	reg1035114.p2	4.397	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-34020	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-34306	-	TSC_hg19_v1_chr20_-_6103678 AK314394 BC040545 AF443278	-34509	-	BC069214 NM_001200	610561	+	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	1782919	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	1862117	-	AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AK314394|FERMT1|55612|fermitin family member 1##BC040545|FERMT1|55612|fermitin family member 1##AF443278|FERMT1|55612|fermitin family member 1##BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4	0.358527	CTCF.p2:-11:0.359
chr2	216783000	216783149	reg1026538.p2	4.397	+	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-482292	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-482554	-	AF312399 TSC_hg19_v1_chr2_-_216290008	-493102	-	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	95262	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	163470	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	163618	+	BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##AF312399|FN1|2335|fibronectin 1##AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169	0.0	
chr2	232537744	232537924	reg1033064.p2	4.397	+	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	-80217	+	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	-142680	-	BC033054 TSC_hg19_v1_chr2_-_232379076	-158752	-	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	35400	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	35498	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	108091	-	NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta	0.132186	
chr3	48514335	48514516	reg1023346.p1	4.397	+	TSC_hg19_v1_chr3_+_48507641 AK315196 BC023630	-6779	+	BC019863 TSC_hg19_v1_chr3_+_48507228 NM_016381 NM_033629 AF151105 AJ243797	-7146	+	TSC_hg19_v1_chr3_+_48488182 AK291829 BC014153 BC020563 AF451323 NM_032166 NM_130384 CU676562 EU832638 EU832715 AF319566	-26211	+	TSC_hg19_v1_chr3_-_48514495 AB097007 BC020279 AL117413 AK310083 AL832568 AF151051 BC001463 AK027728 AK298799	106	-	AK124652 TSC_hg19_v1_chr3_-_48541588 AB527510 AK075441 AF520698 NM_016479	27149	-	DQ891635 DQ894825 BC010269 NM_004567 AF108765 D49818 TSC_hg19_v1_chr3_-_48594237 AK299097 AK312623 AY707863 AY714243 AY756062 AY756063 AY756064	79840	-	AK315196|TREX1|11277|three prime repair exonuclease 1##BC023630|TREX1|11277|three prime repair exonuclease 1##BC019863|TREX1|11277|three prime repair exonuclease 1##NM_016381|TREX1|11277|three prime repair exonuclease 1##NM_033629|TREX1|11277|three prime repair exonuclease 1##AF151105|TREX1|11277|three prime repair exonuclease 1##AJ243797|TREX1|11277|three prime repair exonuclease 1##AK291829|ATRIP|84126|ATR interacting protein##BC014153|ATRIP|84126|ATR interacting protein##BC020563|ATRIP|84126|ATR interacting protein##AF451323|ATRIP|84126|ATR interacting protein##NM_032166|ATRIP|84126|ATR interacting protein##NM_130384|ATRIP|84126|ATR interacting protein##EU832638|TREX1|11277|three prime repair exonuclease 1##EU832715|TREX1|11277|three prime repair exonuclease 1##AB097007|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC020279|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL117413|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AL832568|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF151051|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##BC001463|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK298799|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK124652|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AK075441|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##AF520698|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##NM_016479|SHISA5|51246|shisa homolog 5 (Xenopus laevis)##DQ891635|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##DQ894825|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##BC010269|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##NM_004567|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AF108765|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##D49818|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK299097|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AK312623|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY707863|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY714243|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756062|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756063|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##AY756064|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4	0.0	
chr3	99137153	99137296	reg1029184.p1	4.397	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-516732	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-685637	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-685979	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	220226	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	399521	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	457767	-	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like	0.0	
chr5	63934036	63934156	reg1030033.p1	4.397	+	BC140707 NM_001029875 BX640900	-131615	+	TSC_hg19_v1_chr5_+_63461666 AK090756 AX746601 NM_001113561 NM_178532 BC101277 BC101278 BC101279 AL832580 BC101397	-472415	+	AK314187 TSC_hg19_v1_chr5_-_63258084	-676074	-	NM_001164442 TSC_hg19_v1_chr5_+_63986235	52089	+	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	130350	-	TSC_hg19_v1_chr5_-_64064491 AK094073 AX748442 NM_173829	130408	-	BC140707|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001029875|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##BX640900|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##AK090756|RNF180|285671|ring finger protein 180##NM_001113561|RNF180|285671|ring finger protein 180##NM_178532|RNF180|285671|ring finger protein 180##BC101277|RNF180|285671|ring finger protein 180##BC101278|RNF180|285671|ring finger protein 180##BC101279|RNF180|285671|ring finger protein 180##AL832580|RNF180|285671|ring finger protein 180##BC101397|RNF180|285671|ring finger protein 180##AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_001164442|FAM159B|100132916|family with sequence similarity 159, member B##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1##AK094073|SREK1IP1|285672|SREK1-interacting protein 1##NM_173829|SREK1IP1|285672|SREK1-interacting protein 1	0.120416	
chr7	34469980	34470080	reg1002832.p1	4.397	+	AK289963 NM_133468 AK096150 BC060868	-524888	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-1300949	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-1321053	-	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	227889	+	DQ287932 NM_015283	607622	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	755762	-	AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)	0.0	
chr11	67381486	67381667	reg1028096.p1	4.396	+	BC007619 TSC_hg19_v1_chr11_+_67377037	-4595	+	NM_001166102 NM_007103 TSC_hg19_v1_chr11_+_67374428 AF092131 AF053070 BC008146 AK310537 AK223061 AK293522 AK300726 BC015645 AB590249 CR456739 CU677379 CU678877 DQ893236 DQ896566 AK316122	-7175	+	TSC_hg19_v1_chr11_+_67351285 AY887902 BC010915 BC044846 X15480 U62589 U30897	-30287	+	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	15827	-	BC113485 BC113487 AY229977 NM_005995	25451	-	AY032593 AY040761 AY169233 BC008689 NM_080658	36542	-	BC007619|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_001166102|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_007103|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF092131|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF053070|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC008146|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK310537|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK223061|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK293522|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK300726|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC015645|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##CR456739|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ893236|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ896566|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK316122|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC010915|GSTP1|2950|glutathione S-transferase pi 1##BC044846|GSTP1|2950|glutathione S-transferase pi 1##X15480|GSTP1|2950|glutathione S-transferase pi 1##U62589|GSTP1|2950|glutathione S-transferase pi 1##U30897|GSTP1|2950|glutathione S-transferase pi 1##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC113485|TBX10|347853|T-box 10##BC113487|TBX10|347853|T-box 10##AY229977|TBX10|347853|T-box 10##NM_005995|TBX10|347853|T-box 10##AY032593|ACY3|91703|aspartoacylase (aminocyclase) 3##AY040761|ACY3|91703|aspartoacylase (aminocyclase) 3##AY169233|ACY3|91703|aspartoacylase (aminocyclase) 3##BC008689|ACY3|91703|aspartoacylase (aminocyclase) 3##NM_080658|ACY3|91703|aspartoacylase (aminocyclase) 3	0.0	
chr1	33592861	33592983	reg1030944.p2	4.396	+	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	-46189	+	TSC_hg19_v1_chr1_-_33502485 NM_001199199 NM_001625 NM_013411	-90422	-	AB005622 TSC_hg19_v1_chr1_-_33502470	-90447	-	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	54726	-	TSC_hg19_v1_chr1_+_33722167 NM_152493	129243	+	TSC_hg19_v1_chr1_-_33813262 AK055807	220374	-	BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##NM_001199199|AK2|204|adenylate kinase 2##NM_001625|AK2|204|adenylate kinase 2##NM_013411|AK2|204|adenylate kinase 2##AB005622|AK2|204|adenylate kinase 2##AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##NM_152493|ZNF362|149076|zinc finger protein 362	0.980322	CTCF.p2:45:0.980
chr1	53787195	53787282	reg1029830.p2	4.396	+	DQ891289 DQ894473 AB528424 TSC_hg19_v1_chr1_-_53704191 AF035940 BC018211 AK297895 AF067173 AK312113 NM_002370	-83037	-	TSC_hg19_v1_chr1_-_53686277 AK000587 BC010908 NM_017887	-100964	-	TSC_hg19_v1_chr1_+_53662495 BC002445 BC005172 AK312687 M58581	-124742	+	Z75190 D50678 BC051836 TSC_hg19_v1_chr1_-_53793738	6424	-	TSC_hg19_v1_chr1_-_53793743 NM_001018054 NM_004631 NM_017522 NM_033300	6543	-	AK057273 NM_033067 AJ291671	137869	+	DQ891289|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##DQ894473|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF035940|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##BC018211|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK297895|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF067173|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK312113|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##NM_002370|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK000587|C1orf123|54987|chromosome 1 open reading frame 123##BC010908|C1orf123|54987|chromosome 1 open reading frame 123##NM_017887|C1orf123|54987|chromosome 1 open reading frame 123##BC002445|CPT2|1376|carnitine palmitoyltransferase 2##BC005172|CPT2|1376|carnitine palmitoyltransferase 2##AK312687|CPT2|1376|carnitine palmitoyltransferase 2##M58581|CPT2|1376|carnitine palmitoyltransferase 2##Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	0.874012	CTCF.p2:-8:0.874
chr15	90304428	90304538	reg1001253.p2	4.396	+	AL357571 TSC_hg19_v1_chr15_-_90294395 EU446875 NM_018670 BC006219	-10034	-	BC064626 NM_020212 AK304683 AK097525	-70440	+	BC101164 BC114384 AK297442 CR542046 CR542075 CU679445 DQ893368 DQ896686 DQ896687 DQ896688 EU176800 AK300978 BC009697 AF093668 AK313318 TSC_hg19_v1_chr15_-_90233984 AB015594 NM_003847 AK001415	-70553	-	BC111413 NM_001039958	15105	+	AK298134 TSC_hg19_v1_chr15_-_90347178	42692	-	AK298339 TSC_hg19_v1_chr15_-_90347590	43087	-	AL357571|MESP1|55897|mesoderm posterior 1 homolog (mouse)##EU446875|MESP1|55897|mesoderm posterior 1 homolog (mouse)##NM_018670|MESP1|55897|mesoderm posterior 1 homolog (mouse)##BC006219|MESP1|55897|mesoderm posterior 1 homolog (mouse)##BC064626|WDR93|56964|WD repeat domain 93##NM_020212|WDR93|56964|WD repeat domain 93##AK304683|WDR93|56964|WD repeat domain 93##AK097525|WDR93|56964|WD repeat domain 93##BC101164|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC114384|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK297442|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##CR542046|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##CR542075|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ893368|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896686|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896687|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896688|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##EU176800|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK300978|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC009697|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AF093668|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK313318|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AB015594|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##NM_003847|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK001415|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC111413|MESP2|145873|mesoderm posterior 2 homolog (mouse)##NM_001039958|MESP2|145873|mesoderm posterior 2 homolog (mouse)##AK298134|ANPEP|290|alanyl (membrane) aminopeptidase##AK298339|ANPEP|290|alanyl (membrane) aminopeptidase	0.0	
chr17	8286611	8286765	reg1016717.p1	4.396	+	TSC_hg19_v1_chr17_-_8286512 BC071664 AK311804 BC066316 D28413 NM_000987	-184	-	TSC_hg19_v1_chr17_-_8280023 BC024723	-6654	-	AB464602 AK131219 NM_213597	-11834	-	NM_001146684	14455	-	TSC_hg19_v1_chr17_+_8339211 AK299559 AF217798 AK056014 NM_001025579 NM_030808 BC026101 AF182078 AY004871	52502	+	BC008968 TSC_hg19_v1_chr17_-_8424250	137548	-	BC071664|RPL26|6154|ribosomal protein L26##AK311804|RPL26|6154|ribosomal protein L26##BC066316|RPL26|6154|ribosomal protein L26##NM_000987|RPL26|6154|ribosomal protein L26##BC024723|KRBA2|124751|KRAB-A domain containing 2##AK131219|KRBA2|124751|KRAB-A domain containing 2##NM_213597|KRBA2|124751|KRAB-A domain containing 2##NM_001146684|RNF222|643904|ring finger protein 222##AK299559|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AF217798|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AK056014|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##NM_001025579|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##NM_030808|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##BC026101|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AF182078|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##AY004871|NDEL1|81565|nudE nuclear distribution gene E homolog (A. nidulans)-like 1##BC008968|MYH10|4628|myosin, heavy chain 10, non-muscle	0.901991	CTCF.p2:-45:0.902
chr2	112130753	112130866	reg1031564.p1	4.396	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-252322	+	AK300513 NM_001142807 BC022268	-640630	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-694987	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	510817	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	510952	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	525376	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.0	
chr3	14473210	14473327	reg1035836.p1	4.396	+	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	-29152	+	TSC_hg19_v1_chr3_+_14444072 AK303649	-29199	+	TSC_hg19_v1_chr3_+_14220355 AJ238095 AB463841 CR457185	-252917	+	NM_001080423	110319	-	TSC_hg19_v1_chr3_+_14693268 NM_016474 AK091158 AX746816 BC005199 BC033897 BC013999	219990	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	220015	+	NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AJ238095|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##CR457185|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2##NM_016474|C3orf19|51244|chromosome 3 open reading frame 19##AK091158|C3orf19|51244|chromosome 3 open reading frame 19##BC005199|C3orf19|51244|chromosome 3 open reading frame 19##BC033897|C3orf19|51244|chromosome 3 open reading frame 19##BC013999|C3orf19|51244|chromosome 3 open reading frame 19##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19	0.0	
chr12	14409592	14409694	reg1031744.p2	4.395	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-276657	-	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-1059914	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-1059926	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	108992	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	128629	+	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	310966	-	BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1	0.9856	CTCF.p2:11:0.986
chr12	27027518	27027685	reg1033575.p1	4.395	+	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	-41521	-	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-679016	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-679310	+	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	63308	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	63629	-	NM_001171887 NM_001171888 NM_015633 AK001534 TSC_hg19_v1_chr12_+_27091402 BC032143 AF161472	63774	+	AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_001171887|FGFR1OP2|26127|FGFR1 oncogene partner 2##NM_001171888|FGFR1OP2|26127|FGFR1 oncogene partner 2##NM_015633|FGFR1OP2|26127|FGFR1 oncogene partner 2##AK001534|FGFR1OP2|26127|FGFR1 oncogene partner 2##BC032143|FGFR1OP2|26127|FGFR1 oncogene partner 2##AF161472|FGFR1OP2|26127|FGFR1 oncogene partner 2	0.0	
chr1	248851927	248852083	reg1030590.p1	4.395	+	NM_001004734 BC137188 BC137189	-6389	-	NM_001001824	-37821	-	NM_001001827 AB528813	-49446	-	AY358453 TSC_hg19_v1_chr1_-_249120082 AK056382 NM_030645	268103	-	TSC_hg19_v1_chr1_+_249132449 BC029310	280452	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	280540	+	NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##NM_001001824|OR2T27|403239|olfactory receptor, family 2, subfamily T, member 27##NM_001001827|OR2T35|403244|olfactory receptor, family 2, subfamily T, member 35##AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like##AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like##BC029310|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672	0.0	
chr14	106472269	106472377	reg1029769.p1	4.395	+	GQ232825 GU552779 GU552687 GU552689 AY003848 FJ873924 FJ873955 GQ232946 HM116167 EF407847 EU350414 GQ232973 HM774711 EF407839 EF441752 U86801 AF211930 AM279559 HM774196 EU099286 EU146322 L04328 L04336 L04337 L33037 AY062319 FJ385375 FJ385408 FJ385414 FJ385418 FJ385419 HM774332 HM774418 HM774599 HM774606 AF103282 EU099067 EU099203 EU099287 EU146373 EU146380 FJ385394 EU099221 EU099283 AF306375 AF306376 AM259139 AY062320 AY392849 AY393007 AY393013 AY393111 AY393223 AY393232 AY393255 AY393368 AY393531 AY393610 AY393666 DQ100814 EU099253 HM996275 AY033262 AY033283 EF177964 FJ385299 AB022655 AB067168 AB067394 AF022000 AJ239360 AJ414006 AY553644 AY553647 AY885171 DQ926345 FJ039788 HM152522 M17750 M17751 U00569 U00580 AY686877 AY944696 DQ535282 DQ535443 DQ535465 DQ535484 EF178053 EF178130 FJ195468 FJ195471 HM152519 AF062134 AF062139 AF062140 AF062142 AF062221 L01278 X65883 X65885 X65887 X65888 X65891 X65892 X65893 Z47274 Z47275 Z47276 Z47277 Z80847 BC075840 TSC_hg19_v1_chr14_-_106471733 BX640724 AK097348 AK126543 AK304469 BX640847 S42403	-666	-	TSC_hg19_v1_chr14_-_106453169 X17117 AK129517 AK130825 BC065733 X59702	-19153	-	U32200 U32268 U32334 U32335 U32336 U32488 U32490 U32599 U32608 U32609 U32947 U32948 U32950 U32963 U33799 U33801 AF028098 AF028106 AF028107 AF028114 AF028118 AY155550 AY155551 DQ454559 AF460797 AF460726 AF460724 AF460827 DQ454629 DQ454614 DQ454962 GQ232822 DQ454705 DQ523871 DQ454580 DQ523917 DQ523919 AY003767 DQ454466 DQ454560 DQ454565 DQ454682 EU099268 GU552685 AY003808 AY003836 DQ454469 DQ454795 DQ454971 DQ454985 DQ454452 DQ454571 DQ454944 DQ454960 DQ523896 EF583670 DQ454558 DQ454677 DQ454859 DQ454868 DQ455000 DQ523852 DQ523901 DQ454442 DQ523848 HQ704012 DQ100720 DQ454840 DQ454949 FJ840328 FJ873931 HM116191 GQ232887 AJ487491 AJ487492 AJ487493 AJ487498 AJ487506 AY003837 JF810257 AF069907 EF091912 EF175411 EF175427 EF583661 EU350413 EU433868 EU433869 EU433881 EU667601 EU667602 FJ694875 GQ232782 GQ232813 GQ232814 GQ232841 GQ232875 GQ232936 GQ232966 GQ232996 JF810256 GQ232768 EF441747 EF583659 AF103205 AF103114 EF566909 U86787 AF484410 HQ392886 JF894284 AM279467 AM279468 AM279469 AM279470 AM279471 AM279552 AM279555 AM279588 AM279641 AF308558 EU099276 GQ232957 AF408722 HM774202 EU099163 HM774025 HM774888 HM775065 JN110525 JN110528 JN111117 L04330 L04332 L04340 FJ385388 FJ385429 GQ504861 HM774080 HM774150 HM774407 HM774529 HM774561 HM774885 HQ704005 HQ704037 S73138 AF103263 AF082193 AJ008249 AY099261 AY206987 AY998750 DQ097896 EU099144 EU099173 EU099285 AF402947 X94432 AM183993 AY393351 EU099152 EU099269 EU099281 AF306372 AJ236544 AJ271548 AY193806 AY376076 AY376077 AY376090 AY393002 AY393003 AY393011 AY393020 AY393107 AY393113 AY393114 AY393116 AY393122 AY393139 AY393140 AY393227 AY393228 AY393241 AY393250 AY393254 AY393257 AY393259 AY393354 AY393357 AY393363 AY393377 AY393497 AY393500 AY393506 AY393509 AY393511 AY393533 AY393613 AY393616 AY393617 AY393633 AY393637 AY393653 AY393671 AY393676 EU099082 EU099119 EU099146 JF894280 HM995126 JN159306 HM995172 HM995197 HM995672 AY941929 DQ100708 DQ100722 DQ523939 DQ523940 DQ524004 DQ524046 DQ524048 DQ524070 DQ524135 HM994894 HM995065 HM995066 HM995070 HM995071 HM995072 HM995073 HM995088 HM995175 HM995192 HM995193 HM995194 HM995195 HM995196 HM995198 HM995281 HM995297 HM995349 HM995351 HM995538 HM995541 HM995542 HM995586 HM995587 HM995589 HM995591 HM995593 HM995610 HM995612 HM995613 HM996403 HM996541 AY971055 DQ926099 AB063667 AB063719 AB063917 AB066970 AB066981 AB067004 AB067009 AB067029 AB067072 AB067119 AB067126 AB067131 AB067253 AB363079 AB363093 AB363142 AB363149 AB363155 AF035019 AF035020 AF209860 AJ239337 AJ308447 AY033279 AY033280 AY376105 AY866614 AY941843 AY941858 AY941885 AY941903 AY941937 AY944702 AY944720 DQ065631 DQ065643 DQ065667 DQ065682 DQ065683 DQ065690 DQ065691 DQ926090 DQ926220 DQ926223 DQ926495 DQ926527 EF178106 EU549725 EU549730 FJ385284 FJ385396 HQ378330 JF894278 JF894282 JF894286 U07988 AB063662 AB063801 AB063829 AB063919 AB066925 AB066926 AB066963 AB067152 AB067166 AB067301 AB067307 AB067308 AB067329 AB067390 AB067393 AB363083 AB363143 AB363151 AB363161 AF006523 AF021941 AF021969 AF022007 AF035786 AF062092 AF062194 AF062195 AF062197 AF115113 AF115129 AF174043 AF174084 AF174094 AF174099 AF174107 AF174114 AF174125 AF174127 AF302820 AF455545 AF455547 AJ239344 AJ239371 AJ308466 AJ389196 AJ414005 AJ414014 AJ617573 AY033238 AY055487 AY345921 AY553642 AY553645 AY577308 AY577310 AY640563 AY866611 AY941911 AY941936 AY941945 AY971057 AY971071 DQ100662 DQ100680 DQ100786 DQ100789 DQ100800 DQ100816 DQ100914 DQ100919 DQ225091 DQ926031 DQ926058 DQ926059 DQ926135 DQ926486 DQ926543 FJ385320 FJ385387 GU570212 GU570215 GU570217 GU570269 HQ689739 JF806453 JF806454 JN158766 JN158852 JN159083 JN159282 JN159291 JN159293 JN159302 JN159305 JN159446 L14456 L23558 S73506 U00499 U00505 U00539 U00554 U00562 U00568 U00586 U71104 U85231 U85241 U86522 Z18846 Z34893 Z92888 AF035803 AY686906 AY686915 AY944693 AY944713 AY944721 DQ535285 DQ535302 DQ535348 DQ535375 DQ535476 EF177970 EF178023 EF178112 EF178115 EF178119 EF178135 HM995869 HM995871 AY957509 AY957510 FJ039793 AF062143 AF062151 AF062178 AF062179 AF062226 AF062256 AF062257 AF062262 AF062267 AF062271 AF067121 AF174005 AF174006 AF174009 AF174016 AF174031 AJ009732 M29468 U43758 U43762 Z14213 Z36889 Z46348 Z47223 Z80852 L23559 M24668 AJ010445 TSC_hg19_v1_chr14_-_106453155 BC080557 M18512	-19398	-	U49664 U32269 U32952 AY312398 AY312399 DQ454445 DQ454564 DQ454725 DQ524089 DQ454727 DQ454701 AF460719 AF460723 AF460756 AF460759 AF460771 AF460834 AF460823 AF460829 AF069906 DQ454534 DQ454674 DQ454797 DQ454818 GQ232799 DQ454530 DQ454764 Z30560 DQ454570 DQ454557 DQ454637 GU552723 GQ232831 Z30574 DQ454608 DQ454707 DQ454862 DQ454866 DQ454867 DQ454932 DQ523879 GQ232818 Z30544 Z30556 Z30563 Z30597 Z30672 DQ454537 DQ454600 Z30594 DQ454991 Z30548 DQ454533 DQ454966 DQ523863 DQ454575 DQ454591 DQ454675 DQ454975 DQ454989 HM116173 AY003860 DQ454688 EF091927 JF810280 EU099245 AY393163 EU099075 EU099102 AY393165 EU099215 AM183979 AY393166 AY393171 AY393177 AY393179 AY393180 AY393181 AY393183 AY393184 S74500 EU620003 AF103363 AF400158 AJ240597 JN110684 S74642 Z46847 FJ385345 FJ385356 FJ385426 GQ504882 AY062307 AF103159 AB274406 AB274412 AY422526 HM995333 L38895 Z92893 AY671484 AY671502 HM996309 DQ524158 DQ524152 AF398957 DQ523937 DQ523942 DQ523974 DQ523976 DQ524014 DQ524020 DQ524029 DQ524039 DQ524045 DQ524146 HM996397 AM233760 AM233767 AM233773 DQ926107 AF453266 AY376082 EF177971 HM995388 HM995482 HM995628 HM995630 HM995662 HM995740 HM995924 HM996182 HM996322 HM996354 HM996496 HM996514 HM996515 AB066901 AB066907 AB067286 AB067291 AB084084 AB453233 AF174055 AF174064 AF174066 AF174090 AF174108 AF174113 AF262203 AF262207 AJ244952 AJ244989 AJ245004 AJ245022 AJ245025 AJ245048 AJ245053 AJ245233 AJ245239 AJ245242 AJ389195 AJ556756 AJ556762 AJ576037 AJ579119 AJ579123 AJ579127 AJ579128 AJ579137 AJ579254 AJ579295 AJ579298 AJ579299 AY640493 AY640507 AY640551 AY670735 AY670737 AY670748 AY670776 AY670778 AY670786 AY670793 AY670807 AY670829 AY670832 AY670848 AY670852 AY670854 AY670861 AY670868 AY670869 AY670876 AY670877 AY670880 AY670887 AY670888 AY670889 AY670891 AY670901 AY670906 AY670908 AY670909 AY670917 AY670922 AY670927 AY670934 AY670936 AY670937 AY670938 AY670939 AY670941 AY670945 AY670955 AY670956 AY670957 AY670964 AY670968 AY670971 AY670979 AY670996 AY671042 AY671084 AY671098 AY671112 AY671127 AY671131 AY671137 AY671138 AY671237 AY671320 AY671325 AY671331 AY671336 AY671344 AY671367 AY671381 AY671385 AY671396 AY671397 AY671404 AY671405 AY671407 AY671408 AY671417 AY671437 AY671440 AY671442 AY671448 AY671463 AY671465 AY671467 AY671469 AY671493 AY671501 AY671506 AY671509 AY671516 AY671522 AY671524 AY671526 AY671542 AY671546 AY671547 AY671550 AY671554 AY671558 AY671559 AY671569 AY671571 AY671584 AY671588 AY671590 AY671594 AY671604 AY671607 AY671608 AY671609 AY671610 AY671611 AY671613 AY671615 AY671616 AY671621 AY671622 AY671628 AY671633 AY671636 AY671643 AY671646 AY671647 AY671649 AY671655 AY671657 AY671662 AY671667 AY671669 AY671679 AY671680 AY671683 AY671687 AY671695 AY671747 AY671768 AY671777 AY671778 AY685295 AY685305 AY685312 AY781854 AY781863 AY971061 AY971111 AY971119 DQ005266 DQ005272 DQ005280 DQ100845 DQ100896 DQ205163 DQ926078 FJ039782 FJ385308 FJ385314 FJ385395 GU570393 GU570394 HM152486 L12191 L12196 L25294 S55101 S67077 U85239 Z18320 Z70635 Z70659 AY686879 DQ535276 DQ535307 DQ535328 EF177962 FJ195498 FJ195512 HM996178 X67910 AY392946 AY392947 AY392948 AY392956 AY671265 AY671019 AY671039 AY671041 AY671259 AY671249 AY671147 AY671154 AY671178 AY671210 AY671260 AY671261 AF013620 AF062200 AF062203 AF062207 AF062220 AF062245 AF062258 AF062264 AF062272 AF174013 AF174036 AF381602 AF381610 AM233776 AM233818 AY670746 AY671066 AY671181 AY671188 AY671211 AY671693 AY671738 M26997 M99609 X52110 Z11958 Z47221 Z75400 Z75402 BC073766 J00231 BC063384 BC011857 CU680082 CU687682 Z14196 Z14194 TSC_hg19_v1_chr14_-_106478575 Z14182	6030	-	AF267814 AF267818 AY393025 M34025 DQ454568 FJ874017 FJ840306 FJ840308 FJ840341 FJ840342 FJ840347 FJ840348 FJ840351 FJ840353 FJ840354 FJ840356 FJ840361 FJ840364 FJ840365 FJ840368 FJ840373 FJ840378 FJ840401 FJ840402 FJ840404 FJ873822 FJ873825 FJ873827 FJ873829 FJ873831 FJ873832 FJ873834 FJ873841 FJ873843 FJ873845 FJ873851 FJ873852 FJ873854 FJ873856 FJ873879 FJ873880 FJ873882 FJ873889 FJ873891 FJ873893 FJ873896 FJ873900 FJ873905 FJ873906 FJ873907 FJ873908 FJ873917 FJ873919 FJ873920 FJ873927 FJ873937 FJ873944 FJ873960 FJ873973 FJ873980 FJ873983 FJ874001 FJ874004 FJ874006 FJ874007 FJ874011 FJ874012 FJ874016 FJ874021 FJ874022 FJ874032 FJ874033 FJ874035 FJ874041 FJ874060 FJ874071 FJ874092 HM116099 HM116103 HM116104 HM116108 HM116110 HM116111 HM116112 HM116124 HM116125 HM116126 HM116127 HM116132 HM116134 HM116142 HM116150 HM116151 HM116156 HM116157 HM116164 HM116171 HM116176 HM116183 HM116185 HM116186 HM116188 HM116194 HM116200 HM116203 HM116204 HM116207 HM116210 HM116211 HM116212 HM116215 HM116218 HM116224 GU552693 GQ232960 GQ232962 GQ232978 AJ008188 S75886 AJ487496 AY003819 AY994082 EU090242 EU667603 JF810259 AY393312 AY392883 AY392887 AY392891 AY392897 AY392900 AY392903 AY393023 AY393026 AY393027 AY393028 AY393029 AY393030 AY393031 AY393032 AY393033 AY393034 AY393035 AY393036 AY393037 AY393038 AY393040 AY393041 AY393042 AY393043 AY393044 AY393045 AY393046 AY393048 AY393049 AY393050 AY393051 AY393276 AY393277 AY393278 AY393283 AY393285 AY393288 AY393289 AY393290 AY393292 AY393294 AY393298 AY393299 AY393303 AY393304 AY393307 AY393310 AY393311 AY393382 AY393386 AY393390 AY393391 AY393392 AY393393 AY393406 AY393413 AY393416 AY393417 AY393418 AY393419 AY393421 AY393423 AY393435 AY393440 AY393452 AY393554 AY393555 AY393557 AY393558 AY393559 AY393564 AY393565 EU099064 EU099181 EU099246 DQ100785 JN110964 AY955064 JN110468 JN110515 JN110517 JN110539 JN110572 JN110594 JN110907 JN110984 JN110994 JN111158 JN111166 JN111205 AY062324 AM279571 AY866601 AY866658 AM279525 AM279573 AY866680 DQ100676 DQ100927 DQ100946 AM279595 AM279596 AM279599 AM279600 DQ100868 DQ926119 DQ926440 DQ926554 DQ926566 HM995527 HM995209 HM995210 HM995212 HM995214 HM995215 HM995376 HM995377 HM995380 HM995398 HM995401 HM995473 HM995528 HM995531 HM995597 HM995599 HM995814 HM995819 AB063834 AB066852 AB066861 AB066862 AB066864 AB066865 AB066866 AB066868 AB066869 AB066870 AB066871 AB066873 AB066874 AB066878 AB067185 AB067189 AB067221 AB067222 AB067223 AB067226 AB067228 AB067229 AB067231 AB067232 AB363096 AB363107 AB374193 AB374196 AB374197 AB374204 AF035018 AF062155 AF062255 AF129754 AF174046 AF174061 AF174070 AF174071 AF455551 AF460966 AY055482 AY345923 AY866550 AY866584 AY866603 AY866625 AY866961 AY941941 DQ205143 DQ490734 DQ490735 DQ490736 DQ923046 DQ926138 DQ926180 DQ926226 DQ926362 DQ926376 DQ926412 DQ926456 DQ926482 DQ926490 DQ926499 DQ926558 DQ926576 DQ926582 DQ926586 DQ926588 DQ926592 DQ926605 DQ926606 DQ926610 DQ926650 FR820874 GU570276 GU570278 GU570279 GU570280 HM152514 HQ378331 HQ378364 HQ378373 S73953 U00545 U00552 U00555 X64147 M90808 AY393141 AY393143 AY393144 AY393146 AY393147 AY393149 AY393150 X69861 AF062130 AF062268 AF062282 AY172958 S67984 X81695 Z47235 Z47237 Z47243 AK301335 TSC_hg19_v1_chr14_-_106494595 AK057617 BC092449	22059	-	AY035373 AY885209 AY885216 X61021 DQ454578 DQ523921 AF460677 AF460684 AF460701 AF460706 AF460802 DQ454428 GQ232803 GQ232912 GQ232954 GU552749 GQ232920 AY003818 AY003835 AY003844 AY003714 AY003809 DQ454647 DQ454454 DQ454471 DQ454492 DQ454915 GU552745 GU552756 GU552770 DQ454424 DQ454524 DQ454812 DQ454885 DQ454891 DQ454983 DQ454662 DQ454913 FJ840305 FJ840316 FJ873819 FJ873835 FJ873939 FJ873998 FJ874018 FJ874053 FJ874076 EU350415 AJ008237 AY003828 AJ487494 AJ487503 AY003805 DQ100698 EF175433 EF441757 EU814965 EU814969 DQ454482 EU099127 AM183996 HQ392896 AJ239383 AM279491 GQ903488 HM995750 AF103301 AF103037 AF103086 AF103146 AF165100 HM774111 AF103361 JN110905 HM775055 HM773993 FJ385329 HM774299 HM774454 HM774805 JN110797 JN111157 L04326 GQ504865 GQ504893 GQ504963 GQ504975 HM773970 HM774033 HM774184 HM774282 HM774312 HM774358 HM774362 HM774394 HM774602 HM774747 HM774807 HM774864 HM774872 HM774884 HM774902 HM774908 HM774914 HM774917 HM774979 HM774993 HM775020 HM775028 HQ703988 HQ704021 HQ704022 JN111201 DQ100741 HM775041 HM775050 S56604 AF103104 AF103221 AY866717 EF624097 EF624098 EF624099 EF624100 EF624101 EF624102 EF624103 EF624104 EF624105 EF624106 EF624107 EF624108 EF624109 EF624110 EF624111 EF624222 AJ300779 AJ300783 AJ300785 AY960861 DQ926366 AF001791 DQ100888 AF485461 AF485467 AF485475 AJ290433 AY376111 AF471523 AY423164 AY423165 AY423166 AY423167 AY423168 AY423196 AY423201 DQ100661 AJ556637 AY165857 AY885183 DQ109964 DQ109966 L37310 U00590 AF471185 AJ389182 AY866729 AY941943 DQ187554 DQ187558 DQ187672 GU570324 HM994886 HM995057 HM995131 HM995134 HM995135 HM995636 HM995660 HM995664 HM995773 HM995858 HM995860 HM996049 HM996147 HM996163 HM996317 HM996335 HM996371 HM996422 HM996433 HM996484 HM996538 U00584 DQ187677 DQ187708 DQ322751 DQ322797 DQ322802 DQ322804 DQ322860 DQ322861 DQ322862 DQ322863 DQ322864 DQ322865 DQ322866 DQ322867 DQ322894 DQ322895 DQ322896 DQ322897 DQ322905 DQ322906 DQ322909 DQ322910 DQ322922 DQ322957 DQ322958 DQ840698 DQ840723 DQ840725 DQ840754 DQ840755 DQ840757 DQ840759 DQ840761 DQ840762 DQ840763 DQ840764 DQ840765 DQ840767 DQ840768 DQ840779 DQ840854 DQ840860 DQ840862 DQ840867 DQ840872 DQ840875 DQ926106 HM996194 AF098360 AF115120 AF151699 AF151701 AF471405 AF471406 AF471470 AJ488539 AJ606116 AJ606117 AY530318 AY686908 DQ100752 DQ100787 DQ100790 DQ100827 DQ100850 DQ926039 DQ926040 DQ926061 DQ926074 DQ926108 DQ926127 DQ926145 DQ926175 DQ926381 DQ926443 DQ926559 DQ926611 EF177960 EF178018 EF178108 EU794412 FJ195533 FJ385315 HQ378333 HQ378408 L19913 X87893 X95740 Z18836 AB021510 AB021520 AB063665 AB063803 AB063812 AB063892 AB066987 AB067027 AB067099 AB067112 AB067123 AB067237 AB067268 AF021995 AF022001 AF052526 AF062119 AF062188 AF062241 AF109406 AF174118 AF408728 AF471169 AF471171 AF471172 AF471177 AF471179 AF471180 AF471181 AF471182 AF471184 AF471186 AF471189 AF471194 AF471195 AF471198 AF471199 AF471203 AF471204 AF471205 AF471208 AF471212 AF471214 AF471220 AF471386 AF471522 AF471527 AF471533 AF471543 AJ238036 AJ238038 AJ238040 AJ239359 AJ245208 AJ245317 AJ271601 AJ300781 AJ300786 AJ300796 AJ414013 AJ488543 AJ491910 AJ555273 AJ556638 AJ556640 AJ556645 AJ556649 AJ556658 AJ556659 AJ556660 AJ556664 AJ556667 AJ556668 AJ556669 AJ574777 AJ574779 AJ579141 AJ579162 AJ579198 AJ579216 AJ579217 AJ579233 AJ579234 AJ579239 AJ579269 AJ627231 AJ627236 AJ627237 AY033247 AY033256 AY033273 AY148344 AY281326 AY640478 AY685255 AY685317 AY955072 AY971017 AY971018 AY971074 AY971101 AY971123 DQ021409 DQ065716 DQ065724 DQ535273 DQ535337 DQ535344 DQ535374 DQ535415 DQ535435 DQ535457 DQ535480 DQ926153 DQ926159 DQ926221 DQ926410 DQ926544 DQ926553 DQ926573 DQ926614 EF177979 EF178025 EF178029 EF178039 EF178120 EF178121 EF178134 EF633799 EF633800 EU549723 EU794426 FJ385367 FJ481089 FJ492901 GQ856061 GQ903508 GQ903515 HM152524 HQ689704 JF806286 JF806288 JF806292 L39958 U00487 U00538 U03400 U76679 U85242 U85243 U96279 U96282 U96284 X62965 X99356 X99361 Z18822 Z95482 Z96960 Z96961 Z96962 Z96971 HM995657 AF283801 AJ249633 HM995748 HM995753 HM995770 HM995771 HM995772 HM995775 HM995873 Z14175 X69864 AY392917 AY393072 AY393151 AY393154 AY393160 X69863 X67908 Z14189 AF062138 AF062243 AF174030 AF174034 U79585 X59134 X65896 CU676308 BC041037 BC018747 BC062335 BC064496 TSC_hg19_v1_chr14_-_106518933 AK130614 AK097345 AK123975 AK126132 AK225676 BX640822	46356	-	BC075840|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640724|IGHM|3507|immunoglobulin heavy constant mu##AK097348|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK126543|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640847|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129517|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC080557|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073766|IGHV4-31|28396|immunoglobulin heavy variable 4-31##J00231|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC063384|IGHD|3495|immunoglobulin heavy constant delta##BC011857|IGHM|3507|immunoglobulin heavy constant mu##AK301335|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC092449|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC041037|IGHM|3507|immunoglobulin heavy constant mu##BC018747|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC062335|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC064496|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097345|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK123975|IGH@|3492|immunoglobulin heavy locus##BX640822|IGH@|3492|immunoglobulin heavy locus	0.704539	CTCF.p2:24:0.705
chr14	77420077	77420197	reg1031362.p2	4.395	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-127342	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-140875	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-140927	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	74547	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	74923	-	AK124327 TSC_hg19_v1_chr14_-_77542533	122396	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.0	
chr15	32092051	32092231	reg1025676.p2	4.395	+	AJ430383 NM_130901	-144600	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-472803	+	NM_001243538	-569092	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	70688	-	TSC_hg19_v1_chr15_-_32162898 AK126002	70802	-	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	230602	+	AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A##AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7	0.0	
chr17	2135076	2135194	reg1030288.p1	4.395	+	DQ187313 NM_001098202	-175578	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-176737	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-189827	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	71677	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	71905	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	72117	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.200236	CTCF.p2:0:0.200
chr1	94375199	94375318	reg1030059.p1	4.395	+	TSC_hg19_v1_chr1_-_94375075 AK290449	-168	-	TSC_hg19_v1_chr1_-_94374987 NM_002061	-254	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	-296	-	AF001945 U88667 AK295818 AF000148 AB210040 DQ426859 NM_000350	211433	-	TSC_hg19_v1_chr1_-_94703141 BC093767 U90920 AK307733 BC022483	327806	-	TSC_hg19_v1_chr1_-_94703252 BC067839 NM_004815	328021	-	AK290449|GCLM|2730|glutamate-cysteine ligase, modifier subunit##NM_002061|GCLM|2730|glutamate-cysteine ligase, modifier subunit##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit##AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##BC093767|ARHGAP29|9411|Rho GTPase activating protein 29##U90920|ARHGAP29|9411|Rho GTPase activating protein 29##AK307733|ARHGAP29|9411|Rho GTPase activating protein 29##BC022483|ARHGAP29|9411|Rho GTPase activating protein 29##BC067839|ARHGAP29|9411|Rho GTPase activating protein 29##NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29	0.959716	CTCF.p2:-29:0.960
chr22	39892508	39892631	reg1029469.p1	4.395	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	-9279	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	-39033	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	-39249	+	TSC_hg19_v1_chr22_+_39898257 NM_019008	5696	+	TSC_hg19_v1_chr22_+_39898332 AL834205	5741	+	TSC_hg19_v1_chr22_+_39898363 AL365515	5790	+	NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_019008|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL834205|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL365515|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like	0.0	
chr4	76633499	76633670	reg1017041.p1	4.395	+	TSC_hg19_v1_chr4_-_76598625 NM_203504 NM_203505	-34932	-	TSC_hg19_v1_chr4_-_76598595 BC011731 AK291772	-35005	-	AF053535 AF145284 TSC_hg19_v1_chr4_-_76598560	-35024	-	TSC_hg19_v1_chr4_-_76649558 AK311578	16091	-	TSC_hg19_v1_chr4_+_76649761 BC016672 AL832010 BC006398	16180	+	TSC_hg19_v1_chr4_+_76649814 AK314289	16231	+	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)	0.0	
chr5	139422885	139423035	reg1029654.p1	4.395	+	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	-115	-	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	-232	-	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	-247554	+	TSC_hg19_v1_chr5_+_139493703 M96684 NM_005859 BC110574 BC110594 BC036087 AB464679 BT019388	70767	+	BC041380 NM_001007189	82559	+	TSC_hg19_v1_chr5_+_139554672 NM_032412	131694	+	U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##M96684|PURA|5813|purine-rich element binding protein A##NM_005859|PURA|5813|purine-rich element binding protein A##BC110574|PURA|5813|purine-rich element binding protein A##BC110594|PURA|5813|purine-rich element binding protein A##BC036087|PURA|5813|purine-rich element binding protein A##BT019388|PURA|5813|purine-rich element binding protein A##BC041380|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##NM_001007189|IGIP|492311|IgA-inducing protein homolog (Bos taurus)##NM_032412|C5orf32|84418|chromosome 5 open reading frame 32	0.0	
chr5	55385112	55385290	reg1032279.p2	4.395	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-94438	-	NM_001242636 NM_001242639	-236052	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-237932	+	AK123389 NM_024669	143984	-	NM_005921	725698	+	TSC_hg19_v1_chr5_+_56111375 AK307828	726163	+	BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr8	126620269	126620385	reg1028525.p1	4.395	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-177748	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-516230	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-516270	-	TSC_hg19_v1_chr8_-_126963395 BX648371	343086	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	950228	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	950397	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.0	
chrX	118773029	118773208	reg1022124.p2	4.395	+	BC047878 BC068514 BC040379 AY208891 NM_001173487 NM_017544	-33290	-	EF165090 EF165091 EF165093 AJ011812 EF158333 EF216688 EF216689 NM_001173488	-46136	-	BC042021 NM_181777	-58821	+	D50918 AB384441 CU679289 CU680116 CU690318 TSC_hg19_v1_chrX_-_118827108 BC069231	53967	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	54014	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	54061	-	BC047878|NKRF|55922|NFKB repressing factor##BC068514|NKRF|55922|NFKB repressing factor##BC040379|NKRF|55922|NFKB repressing factor##AY208891|NKRF|55922|NFKB repressing factor##NM_001173487|NKRF|55922|NFKB repressing factor##NM_017544|NKRF|55922|NFKB repressing factor##EF165090|NKRF|55922|NFKB repressing factor##EF165091|NKRF|55922|NFKB repressing factor##EF165093|NKRF|55922|NFKB repressing factor##AJ011812|NKRF|55922|NFKB repressing factor##EF158333|NKRF|55922|NFKB repressing factor##EF216688|NKRF|55922|NFKB repressing factor##EF216689|NKRF|55922|NFKB repressing factor##NM_001173488|NKRF|55922|NFKB repressing factor##BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D50918|SEPT6|23157|septin 6##BC069231|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6	0.0	
chrX	26870250	26870370	reg1032971.p1	4.395	+	AK097561 BC067286 NM_173523	-659754	+	NM_173699 BC029525 AK057361	-713824	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-1836237	-	BC157859 NM_001136533	894615	+	AK057527 NM_182506 BC101307 BC101309 BC101310	955805	+	AK128123 NM_001017930	1129255	-	AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##NM_139058|ARX|170302|aristaless related homeobox##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	0.247429	CTCF.p2:-9:0.247
chr18	57543499	57543629	reg1032285.p1	4.394	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-178914	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	-178973	-	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	-517078	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	23665	+	AK314130 NM_005912	496436	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1614210	+	NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2	0.0	
chr19	53898226	53898355	reg1029355.p2	4.394	+	AK295079 NM_138374 TSC_hg19_v1_chr19_+_53837011	-61279	+	NM_033341 AF420440	-103414	-	NM_001195187	-113480	+	TSC_hg19_v1_chr19_+_53898385 NM_001040185	101	+	TSC_hg19_v1_chr19_+_53898401 AK316300 BX647981 AK295840	114	+	TSC_hg19_v1_chr19_+_53898427 BC140724 BC017357	135	+	AK295079|ZNF845|91664|zinc finger protein 845##NM_138374|ZNF845|91664|zinc finger protein 845##NM_033341|BIRC8|112401|baculoviral IAP repeat containing 8##AF420440|BIRC8|112401|baculoviral IAP repeat containing 8##NM_001195187|LOC646508|646508|family with sequence similarity 90, member A1-like##NM_001040185|ZNF765|91661|zinc finger protein 765##AK316300|ZNF765|91661|zinc finger protein 765##BX647981|ZNF765|91661|zinc finger protein 765##AK295840|ZNF765|91661|zinc finger protein 765##BC140724|ZNF765|91661|zinc finger protein 765##BC017357|ZNF765|91661|zinc finger protein 765	0.074224	
chr5	159934171	159934339	reg1029207.p2	4.394	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-85352	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-85401	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-88150	-	AK025130 TSC_hg19_v1_chr5_-_160112393	178084	-	AB018258 AK295081 AK090832 AX746642 NM_025153	344876	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	1040871	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.0	
chr6_dbb_hap3	4036059	4036170	reg1030954.p2	4.394	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.575395	CTCF.p2:6:0.575
chr8	124173417	124173598	reg1008227.p2	4.394	+	TSC_hg19_v1_chr8_+_124084951 BC101724 BC111954 BC143523 BC143525 BC105800 AK094612	-88537	+	TSC_hg19_v1_chr8_+_124084927 AK056434 NM_001145088 NM_145647	-88594	+	TSC_hg19_v1_chr8_-_124054594 NM_001134671 NM_024295	-118888	-	NM_032899 NM_207006 BC052300 TSC_hg19_v1_chr8_+_124194829	21283	+	TSC_hg19_v1_chr8_+_124194906 BC007828 CU690902	21476	+	CU690903 TSC_hg19_v1_chr8_-_124220025	46468	-	BC101724|WDR67|93594|WD repeat domain 67##BC111954|WDR67|93594|WD repeat domain 67##BC143523|WDR67|93594|WD repeat domain 67##BC143525|WDR67|93594|WD repeat domain 67##BC105800|WDR67|93594|WD repeat domain 67##AK094612|WDR67|93594|WD repeat domain 67##AK056434|WDR67|93594|WD repeat domain 67##NM_001145088|WDR67|93594|WD repeat domain 67##NM_145647|WDR67|93594|WD repeat domain 67##NM_001134671|DERL1|79139|Der1-like domain family, member 1##NM_024295|DERL1|79139|Der1-like domain family, member 1##NM_032899|FAM83A|84985|family with sequence similarity 83, member A##NM_207006|FAM83A|84985|family with sequence similarity 83, member A##BC052300|FAM83A|84985|family with sequence similarity 83, member A##BC007828|FAM83A|84985|family with sequence similarity 83, member A	0.0	
chr9	70396395	70396512	reg1033362.p1	4.394	+	NM_001126334	-217639	-	AL136793 NM_001098805	-1014473	+	AF265442 BC069006 AK293173 NM_001085457	-1133899	-	NM_001099279 NM_199244	33277	-	CU688346 TSC_hg19_v1_chr9_-_70490092	93628	-	AF265442 TSC_hg19_v1_chr9_-_70490099	93645	-	NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4##AF265442|CBWD5|220869|COBW domain containing 5	0.0	
chrX	103515694	103515825	reg1029087.p1	4.394	+	BC042633 AY114148 BC053599 NM_153448 AK097704	-16173	-	TSC_hg19_v1_chrX_+_103411251 BC017665	-104492	+	TSC_hg19_v1_chrX_+_103411133 AK091221 AX746858 BC057847 NM_207318	-104635	+	AK290196 TSC_hg19_v1_chrX_+_103810879	295120	+	TSC_hg19_v1_chrX_+_103810991 AJ272208 NM_017416	295233	+	BC108734 AF285597 BC042547 NM_031274	949594	-	BC042633|ESX1|80712|ESX homeobox 1##AY114148|ESX1|80712|ESX homeobox 1##BC053599|ESX1|80712|ESX homeobox 1##NM_153448|ESX1|80712|ESX homeobox 1##AK097704|ESX1|80712|ESX homeobox 1##BC017665|FAM199X|139231|family with sequence similarity 199, X-linked##AK091221|FAM199X|139231|family with sequence similarity 199, X-linked##BC057847|FAM199X|139231|family with sequence similarity 199, X-linked##NM_207318|FAM199X|139231|family with sequence similarity 199, X-linked##AK290196|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##AJ272208|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##NM_017416|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##BC108734|TEX13A|56157|testis expressed 13A##AF285597|TEX13A|56157|testis expressed 13A##BC042547|TEX13A|56157|testis expressed 13A##NM_031274|TEX13A|56157|testis expressed 13A	0.649327	CTCF.p2:28:0.649
chr1	6454139	6454228	reg1028206.p2	4.393	+	BC017365 AK057168 NM_007274	-384	-	BT006888 TSC_hg19_v1_chr1_-_6453439 AB074415 AB074416 D88894 AK289572 AK300831	-772	-	AK290097 AB074417 NM_181864	-8374	-	AB463714 BC132698 BC136963 BC142687 TSC_hg19_v1_chr1_-_6479976 AK091122 NM_019089	25747	-	TSC_hg19_v1_chr1_+_6484835 AL136880 NM_031475	30648	+	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	72019	-	BC017365|ACOT7|11332|acyl-CoA thioesterase 7##AK057168|ACOT7|11332|acyl-CoA thioesterase 7##NM_007274|ACOT7|11332|acyl-CoA thioesterase 7##BT006888|ACOT7|11332|acyl-CoA thioesterase 7##AB074415|ACOT7|11332|acyl-CoA thioesterase 7##AB074416|ACOT7|11332|acyl-CoA thioesterase 7##D88894|ACOT7|11332|acyl-CoA thioesterase 7##AK289572|ACOT7|11332|acyl-CoA thioesterase 7##AK300831|ACOT7|11332|acyl-CoA thioesterase 7##AK290097|ACOT7|11332|acyl-CoA thioesterase 7##AB074417|ACOT7|11332|acyl-CoA thioesterase 7##NM_181864|ACOT7|11332|acyl-CoA thioesterase 7##BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)##NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AL136880|ESPN|83715|espin##NM_031475|ESPN|83715|espin##U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25	0.044092	
chr2	111958949	111959080	reg1028956.p1	4.393	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-80527	+	AK300513 NM_001142807 BC022268	-468835	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-523192	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	682612	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	682747	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	697171	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.0	
chr2	15198304	15198438	reg1031959.p1	4.393	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	-425520	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	-425550	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-2339974	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	503058	-	TSC_hg19_v1_chr2_-_15701451 BC108693 AF388385 BC131735 NM_015909 AB621813	503087	-	NM_004939 X70649	533398	+	AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence##BC108693|NBAS|51594|neuroblastoma amplified sequence##AF388385|NBAS|51594|neuroblastoma amplified sequence##BC131735|NBAS|51594|neuroblastoma amplified sequence##NM_015909|NBAS|51594|neuroblastoma amplified sequence##AB621813|NBAS|51594|neuroblastoma amplified sequence##NM_004939|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##X70649|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	0.942233	CTCF.p2:-23:0.942
chr2	208193748	208193927	reg1027950.p1	4.393	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-162212	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-163181	-	BC112076 BC112078 NM_173077 AJ422118	-389537	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	200806	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	200884	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	200944	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.0	
chr22	34293134	34293217	reg1033790.p2	4.393	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-838820	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-890449	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-1095423	+	AJ007583 AB011181 NM_004737 NM_133642	23195	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1168974	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1360301	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr3	61222333	61222511	reg1030720.p2	4.393	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-2186662	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-2186681	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-2186714	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	14668	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	324789	+	BC047734 TSC_hg19_v1_chr3_+_61547294	324864	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.031991	
chr4	144293765	144293933	reg1029831.p2	4.393	+	NM_002039 NM_207123 AK289767 BC064848	-35834	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	-187724	+	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	-187785	+	TSC_hg19_v1_chr4_+_144434860 NM_003601 AK316444 AK302841 BC023144 AB010882 AK308424	140879	+	AB384709 TSC_hg19_v1_chr4_+_144435139	141265	+	TSC_hg19_v1_chr4_+_144480613 AX721285 AX721289 BC025996	186767	+	NM_002039|GAB1|2549|GRB2-associated binding protein 1##NM_207123|GAB1|2549|GRB2-associated binding protein 1##AK289767|GAB1|2549|GRB2-associated binding protein 1##BC064848|GAB1|2549|GRB2-associated binding protein 1##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##NM_003601|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK316444|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK302841|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##BC023144|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AB010882|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##AK308424|SMARCA5|8467|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5##BC025996|GUSBP5|441046|glucuronidase, beta pseudogene 5	0.0	
chrX	132910259	132910377	reg1031477.p1	4.393	+	TSC_hg19_v1_chrX_-_132549514 AK312605 AY358507 BC017166	-360850	-	AB528412 CU677845 DQ891809 DQ894992 AF064826 AY052833 AF030186 NM_001448 TSC_hg19_v1_chrX_-_132549316	-361144	-	EU446842 BC074762 BC117336 BC126361 AB464736 AF219119 NM_016521	-558078	-	AB527294 CU690242 DQ349136 DQ349137 DQ349138 DQ893658 DQ895822 TSC_hg19_v1_chrX_-_133119622 Z37987 L47176 AK222761 AK222766 AK310689 BC035972 U50410	209231	-	TSC_hg19_v1_chrX_-_133119645 L47125 AK300168 NM_001164617 NM_001164618 NM_001164619 NM_004484	209333	-	NM_001101357	460758	+	AK312605|GPC4|2239|glypican 4##AY358507|GPC4|2239|glypican 4##BC017166|GPC4|2239|glypican 4##DQ891809|GPC4|2239|glypican 4##DQ894992|GPC4|2239|glypican 4##AF064826|GPC4|2239|glypican 4##AY052833|GPC4|2239|glypican 4##AF030186|GPC4|2239|glypican 4##NM_001448|GPC4|2239|glypican 4##EU446842|TFDP3|51270|transcription factor Dp family, member 3##BC074762|TFDP3|51270|transcription factor Dp family, member 3##BC117336|TFDP3|51270|transcription factor Dp family, member 3##BC126361|TFDP3|51270|transcription factor Dp family, member 3##AF219119|TFDP3|51270|transcription factor Dp family, member 3##NM_016521|TFDP3|51270|transcription factor Dp family, member 3##DQ349136|GPC3|2719|glypican 3##DQ349137|GPC3|2719|glypican 3##DQ349138|GPC3|2719|glypican 3##DQ893658|GPC3|2719|glypican 3##DQ895822|GPC3|2719|glypican 3##Z37987|GPC3|2719|glypican 3##L47176|GPC3|2719|glypican 3##AK222761|GPC3|2719|glypican 3##AK222766|GPC3|2719|glypican 3##AK310689|GPC3|2719|glypican 3##BC035972|GPC3|2719|glypican 3##U50410|GPC3|2719|glypican 3##L47125|GPC3|2719|glypican 3##AK300168|GPC3|2719|glypican 3##NM_001164617|GPC3|2719|glypican 3##NM_001164618|GPC3|2719|glypican 3##NM_001164619|GPC3|2719|glypican 3##NM_004484|GPC3|2719|glypican 3##NM_001101357|CCDC160|347475|coiled-coil domain containing 160	0.991923	CTCF.p2:-3:0.992
chrX	70916872	70916971	reg1031565.p2	4.393	+	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	-78589	-	NM_052957	-119048	+	TSC_hg19_v1_chrX_+_70765496 AL050366	-151399	+	NM_001145139 NM_001145140	21213	-	NM_001145139 NM_001145140	66218	+	TSC_hg19_v1_chrX_+_71130694 NM_001013627	213857	+	AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_052957|ACRC|93953|acidic repeat containing##AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001013627|NHSL2|340527|NHS-like 2	0.013596	
chr13	53191477	53191636	reg1032672.p1	4.392	+	TSC_hg19_v1_chr13_+_53035247 AL136848	-156263	+	EF560732 TSC_hg19_v1_chr13_+_53029614 BC105806 BC066920 BC130296 BC136332 EU832808 GQ129239 HQ258356	-161904	+	NM_001098525 NM_018204 TSC_hg19_v1_chr13_+_53029573 AY062261 AY062262 AK022982 Y15758	-162003	+	TSC_hg19_v1_chr13_+_53191659 NM_001011724 NM_001011725 BC007108 AK123159 BC082242	81	+	TSC_hg19_v1_chr13_+_53216565 BC108266	25009	+	NM_001130912 NM_006704 TSC_hg19_v1_chr13_+_53227044 AJ344097 AK292128 AY321358 AK302363 AY271314 BC000911 AK291402 AB528309 AF132856 BT009798 DQ890945 DQ894108	35386	+	AL136848|CKAP2|26586|cytoskeleton associated protein 2##EF560732|CKAP2|26586|cytoskeleton associated protein 2##BC105806|CKAP2|26586|cytoskeleton associated protein 2##BC066920|CKAP2|26586|cytoskeleton associated protein 2##BC130296|CKAP2|26586|cytoskeleton associated protein 2##BC136332|CKAP2|26586|cytoskeleton associated protein 2##EU832808|CKAP2|26586|cytoskeleton associated protein 2##GQ129239|CKAP2|26586|cytoskeleton associated protein 2##HQ258356|CKAP2|26586|cytoskeleton associated protein 2##NM_001098525|CKAP2|26586|cytoskeleton associated protein 2##NM_018204|CKAP2|26586|cytoskeleton associated protein 2##AY062261|CKAP2|26586|cytoskeleton associated protein 2##AY062262|CKAP2|26586|cytoskeleton associated protein 2##AK022982|CKAP2|26586|cytoskeleton associated protein 2##Y15758|CKAP2|26586|cytoskeleton associated protein 2##NM_001011724|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001011725|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##AK123159|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##BC082242|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001130912|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##NM_006704|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AJ344097|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK292128|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY321358|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK302363|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY271314|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC000911|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK291402|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF132856|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BT009798|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ890945|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ894108|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	0.0	
chr1	45272996	45273167	reg1028935.p1	4.392	+	BC092499 DQ132441 NM_001013632	-125	-	TSC_hg19_v1_chr1_+_45266048 AB209875 EU832631 EU832706 BC004135 BC004198 BC013960 U56998	-6949	+	BC013899 NM_004073 TSC_hg19_v1_chr1_+_45266045	-7040	+	NM_001136537 TSC_hg19_v1_chr1_+_45274197 AK304611 AK056150	1129	+	AF087651 AF091501 AY358555 AB527344 AY359016 AF119569 NM_001166292 NM_003738 BC143712	35556	-	TSC_hg19_v1_chr1_-_45452256 BC021017 BC018728 AK022399 AF257077 BC014234 AL834288	179156	-	BC092499|TCTEX1D4|343521|Tctex1 domain containing 4##DQ132441|TCTEX1D4|343521|Tctex1 domain containing 4##NM_001013632|TCTEX1D4|343521|Tctex1 domain containing 4##AB209875|PLK3|1263|polo-like kinase 3##EU832631|PLK3|1263|polo-like kinase 3##EU832706|PLK3|1263|polo-like kinase 3##BC004135|PLK3|1263|polo-like kinase 3##BC004198|PLK3|1263|polo-like kinase 3##BC013960|PLK3|1263|polo-like kinase 3##U56998|PLK3|1263|polo-like kinase 3##BC013899|PLK3|1263|polo-like kinase 3##NM_004073|PLK3|1263|polo-like kinase 3##NM_001136537|BTBD19|149478|BTB (POZ) domain containing 19##AK304611|BTBD19|149478|BTB (POZ) domain containing 19##AK056150|BTBD19|149478|BTB (POZ) domain containing 19##AF087651|PTCH2|8643|patched 2##AF091501|PTCH2|8643|patched 2##AY358555|PTCH2|8643|patched 2##AY359016|PTCH2|8643|patched 2##AF119569|PTCH2|8643|patched 2##NM_001166292|PTCH2|8643|patched 2##NM_003738|PTCH2|8643|patched 2##BC143712|PTCH2|8643|patched 2##BC021017|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##BC018728|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AK022399|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AF257077|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##BC014234|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AL834288|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa	0.0	
chr17	47921274	47921366	reg1029322.p1	4.392	+	TSC_hg19_v1_chr17_+_47866119 AF074606 AB463912 CU689460 DQ890883 DQ894037	-55162	+	TSC_hg19_v1_chr17_+_47866068 BC015485 BC032640 AF217502	-55239	+	NM_001199155 NM_001199156 NM_001199157 NM_001199158 NM_007067 TSC_hg19_v1_chr17_+_47866042 AK293976 AK294014 AK023890 AK294052 AK294836 AF140360	-55302	+	AK127421 NM_001242791	1951	+	AF515828 AF515829 AF515830 AF515831 AF521560 AY471574 BC100840 BC100841 BC100842 BC100843 BC111857 BC111858 NM_001077503 NM_001077504 NM_001077505 NM_001077506 NM_170685	4058	-	BC016145 NM_138281 AF254115	125242	+	AF074606|KAT7|11143|K(lysine) acetyltransferase 7##DQ890883|KAT7|11143|K(lysine) acetyltransferase 7##DQ894037|KAT7|11143|K(lysine) acetyltransferase 7##BC015485|KAT7|11143|K(lysine) acetyltransferase 7##BC032640|KAT7|11143|K(lysine) acetyltransferase 7##AF217502|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199155|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199156|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199157|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199158|KAT7|11143|K(lysine) acetyltransferase 7##NM_007067|KAT7|11143|K(lysine) acetyltransferase 7##AK293976|KAT7|11143|K(lysine) acetyltransferase 7##AK294014|KAT7|11143|K(lysine) acetyltransferase 7##AK023890|KAT7|11143|K(lysine) acetyltransferase 7##AK294052|KAT7|11143|K(lysine) acetyltransferase 7##AK294836|KAT7|11143|K(lysine) acetyltransferase 7##AF140360|KAT7|11143|K(lysine) acetyltransferase 7##AK127421|FLJ45513|729220|uncharacterized LOC729220##NM_001242791|FLJ45513|729220|uncharacterized LOC729220##AF515828|TAC4|255061|tachykinin 4 (hemokinin)##AF515829|TAC4|255061|tachykinin 4 (hemokinin)##AF515830|TAC4|255061|tachykinin 4 (hemokinin)##AF515831|TAC4|255061|tachykinin 4 (hemokinin)##AF521560|TAC4|255061|tachykinin 4 (hemokinin)##AY471574|TAC4|255061|tachykinin 4 (hemokinin)##BC100840|TAC4|255061|tachykinin 4 (hemokinin)##BC100841|TAC4|255061|tachykinin 4 (hemokinin)##BC100842|TAC4|255061|tachykinin 4 (hemokinin)##BC100843|TAC4|255061|tachykinin 4 (hemokinin)##BC111857|TAC4|255061|tachykinin 4 (hemokinin)##BC111858|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077503|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077504|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077505|TAC4|255061|tachykinin 4 (hemokinin)##NM_001077506|TAC4|255061|tachykinin 4 (hemokinin)##NM_170685|TAC4|255061|tachykinin 4 (hemokinin)##BC016145|DLX4|1748|distal-less homeobox 4##NM_138281|DLX4|1748|distal-less homeobox 4##AF254115|DLX4|1748|distal-less homeobox 4	0.765985	CTCF.p2:-9:0.766
chr19	49092420	49092600	reg1008589.p2	4.392	+	NM_004605	-13518	+	TSC_hg19_v1_chr19_+_49055432 NM_177973 U92315 BC034694 CU689942	-37046	+	AB067470 NM_001080434	-76079	-	AF353721 NM_133498 AY358387 BC047334	17499	+	BC111970 BC111972 NM_017708 AK000207	24245	-	TSC_hg19_v1_chr19_-_49122434 L11566 BC009708 BC051837 AK091257 AX746879 AK026558 AK293386 BC021743 D28461 NM_000979	29923	-	NM_004605|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##NM_177973|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##U92315|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##BC034694|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##AB067470|LMTK3|114783|lemur tyrosine kinase 3##NM_001080434|LMTK3|114783|lemur tyrosine kinase 3##AF353721|SPACA4|171169|sperm acrosome associated 4##NM_133498|SPACA4|171169|sperm acrosome associated 4##AY358387|SPACA4|171169|sperm acrosome associated 4##BC047334|SPACA4|171169|sperm acrosome associated 4##BC111970|FAM83E|54854|family with sequence similarity 83, member E##BC111972|FAM83E|54854|family with sequence similarity 83, member E##NM_017708|FAM83E|54854|family with sequence similarity 83, member E##AK000207|FAM83E|54854|family with sequence similarity 83, member E##L11566|RPL18|6141|ribosomal protein L18##BC009708|RPL18|6141|ribosomal protein L18##AK026558|RPL18|6141|ribosomal protein L18##AK293386|RPL18|6141|ribosomal protein L18##BC021743|RPL18|6141|ribosomal protein L18##D28461|RPL18|6141|ribosomal protein L18##NM_000979|RPL18|6141|ribosomal protein L18	0.0	
chr19	53693136	53693240	reg1031401.p2	4.392	+	BC002938 BC015611 TSC_hg19_v1_chr19_-_53662285 AY029765 AK289994 AK314603 AK096623 NM_001172674 NM_001172675 NM_032584	-30888	-	DQ925695 DQ925698 BC069668 BC063880 DQ925696 AK002053 AK095504 AY283600 NM_018355 DQ925697 NM_001136038 NM_001164309	-57040	-	BC094880 TSC_hg19_v1_chr19_-_53606670 BC000807 BC012054 NM_001102603 NM_033288 NM_198893	-86542	-	AL832507 AK291403 AK096261 NM_024733	3422	-	BC029855 TSC_hg19_v1_chr19_-_53758075 AK026366	64823	-	TSC_hg19_v1_chr19_-_53758116 BC050038 NM_182609 AK308120 BX648243 AX721115	64935	-	BC002938|ZNF347|84671|zinc finger protein 347##BC015611|ZNF347|84671|zinc finger protein 347##AY029765|ZNF347|84671|zinc finger protein 347##AK289994|ZNF347|84671|zinc finger protein 347##AK314603|ZNF347|84671|zinc finger protein 347##AK096623|ZNF347|84671|zinc finger protein 347##NM_001172674|ZNF347|84671|zinc finger protein 347##NM_001172675|ZNF347|84671|zinc finger protein 347##NM_032584|ZNF347|84671|zinc finger protein 347##DQ925695|ZNF415|55786|zinc finger protein 415##DQ925698|ZNF415|55786|zinc finger protein 415##BC069668|ZNF415|55786|zinc finger protein 415##BC063880|ZNF415|55786|zinc finger protein 415##DQ925696|ZNF415|55786|zinc finger protein 415##AK002053|ZNF415|55786|zinc finger protein 415##AK095504|ZNF415|55786|zinc finger protein 415##AY283600|ZNF415|55786|zinc finger protein 415##NM_018355|ZNF415|55786|zinc finger protein 415##DQ925697|ZNF415|55786|zinc finger protein 415##NM_001136038|ZNF415|55786|zinc finger protein 415##NM_001164309|ZNF415|55786|zinc finger protein 415##BC094880|ZNF160|90338|zinc finger protein 160##BC000807|ZNF160|90338|zinc finger protein 160##BC012054|ZNF160|90338|zinc finger protein 160##NM_001102603|ZNF160|90338|zinc finger protein 160##NM_033288|ZNF160|90338|zinc finger protein 160##NM_198893|ZNF160|90338|zinc finger protein 160##AL832507|ZNF665|79788|zinc finger protein 665##AK291403|ZNF665|79788|zinc finger protein 665##AK096261|ZNF665|79788|zinc finger protein 665##NM_024733|ZNF665|79788|zinc finger protein 665##BC029855|ZNF677|342926|zinc finger protein 677##AK026366|ZNF677|342926|zinc finger protein 677##BC050038|ZNF677|342926|zinc finger protein 677##NM_182609|ZNF677|342926|zinc finger protein 677##AK308120|ZNF677|342926|zinc finger protein 677##BX648243|ZNF677|342926|zinc finger protein 677	0.087661	
chr5	171538410	171538570	reg1032381.p2	4.392	+	BC026213 NM_012300 NM_033644 NM_033645	-104614	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	-104846	-	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	-104962	-	AB015718 TSC_hg19_v1_chr5_-_171615170	76648	-	AK307943 TSC_hg19_v1_chr5_-_171615203	76713	-	TSC_hg19_v1_chr5_-_171615241 BC070077 AK313350	76783	-	BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB015718|STK10|6793|serine/threonine kinase 10##AK307943|STK10|6793|serine/threonine kinase 10##BC070077|STK10|6793|serine/threonine kinase 10##AK313350|STK10|6793|serine/threonine kinase 10	0.0	
chr9	2859915	2860059	reg1030932.p1	4.392	+	TSC_hg19_v1_chr9_-_2844102 AK315531 NM_014878	-15874	-	TSC_hg19_v1_chr9_-_2844084 AL832245 AK225953 AL832239	-15898	-	TSC_hg19_v1_chr9_-_2844074 AK292169 BC020598	-15915	-	AK127804 TSC_hg19_v1_chr9_-_3223066	363049	-	TSC_hg19_v1_chr9_-_3525889 AK310956 AK289540	665852	-	TSC_hg19_v1_chr9_-_3525983 BC022191 NM_002919 NM_134428	666017	-	AK315531|KIAA0020|9933|KIAA0020##NM_014878|KIAA0020|9933|KIAA0020##AL832245|KIAA0020|9933|KIAA0020##AK225953|KIAA0020|9933|KIAA0020##AL832239|KIAA0020|9933|KIAA0020##AK292169|KIAA0020|9933|KIAA0020##AK310956|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##AK289540|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##BC022191|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_002919|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_134428|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)	0.989597	CTCF.p2:-10:0.990
chr19	36193156	36193298	reg1028282.p1	4.391	+	BC107097 BC107098 NM_007000 AF085807	-35511	+	TSC_hg19_v1_chr19_+_36139253 D28426 BC002478 X54473 X13923	-53975	+	TSC_hg19_v1_chr19_+_36139222 AK312140	-54003	+	AF130255 NM_014383	10602	+	TSC_hg19_v1_chr19_+_36208923 AJ007041 NM_014727	15703	+	TSC_hg19_v1_chr19_+_36209125 AF186605	15959	+	BC107097|UPK1A|11045|uroplakin 1A##BC107098|UPK1A|11045|uroplakin 1A##NM_007000|UPK1A|11045|uroplakin 1A##AF085807|UPK1A|11045|uroplakin 1A##D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##AK312140|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##AF130255|ZBTB32|27033|zinc finger and BTB domain containing 32##NM_014383|ZBTB32|27033|zinc finger and BTB domain containing 32##AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##AF186605|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4	0.0	
chr20	62643663	62643844	reg1022807.p4	4.391	+	TSC_hg19_v1_chr20_+_62612576 AB527848	-31167	+	AF221842 TSC_hg19_v1_chr20_+_62612506 AF026031 AK314310 AB019219 BC001666	-31222	+	TSC_hg19_v1_chr20_+_62612487 AK225993 AK001554	-31276	+	AJ243896 AF270652 BC111390 NM_018419 BC035513 BC038590 BC073971 TSC_hg19_v1_chr20_-_62680993 AB033888	37185	-	NM_198723	44685	+	NM_003195	50256	+	AF221842|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF026031|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK314310|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AB019219|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##BC001666|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK225993|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK001554|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AJ243896|SOX18|54345|SRY (sex determining region Y)-box 18##AF270652|SOX18|54345|SRY (sex determining region Y)-box 18##BC111390|SOX18|54345|SRY (sex determining region Y)-box 18##NM_018419|SOX18|54345|SRY (sex determining region Y)-box 18##BC035513|SOX18|54345|SRY (sex determining region Y)-box 18##BC038590|SOX18|54345|SRY (sex determining region Y)-box 18##BC073971|SOX18|54345|SRY (sex determining region Y)-box 18##AB033888|SOX18|54345|SRY (sex determining region Y)-box 18##NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2	0.0	
chr2	62671160	62671247	reg1031396.p2	4.391	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-247937	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-538374	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-555417	-	BC047439 AK091902 AX747245 NM_198276	62336	-	AK292545 NM_001142615	229782	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	261763	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.119704	
chr4	105716637	105716753	reg1028163.p2	4.391	+	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	-300642	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	-304213	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-1075795	-	BX640738 NM_017628	350336	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	351116	+	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	351349	+	AK127778|CXXC4|80319|CXXC finger protein 4##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2	0.0	
chr4	124048521	124048623	reg1030312.p1	4.391	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-204320	+	AF019632 AK294450 NM_198041	-204432	-	TSC_hg19_v1_chr4_-_123843731 DQ893139 DQ896423 BC009842 AB209758 AK291871 AF019633 NM_007083	-204811	-	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	269384	+	AK026960 BC063856 NM_005841	272101	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	1585242	-	NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AF019632|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK294450|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_198041|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50	0.908527	CTCF.p2:-44:0.909
chr6_qbl_hap6	3091462	3091594	reg1027474.p1	4.391	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.953188	CTCF.p2:32:0.953
chr8	128320090	128320270	reg1025715.p2	4.391	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-749456	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-749625	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1356767	-	DQ486513 NM_001159542	107676	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	428145	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	428310	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.0	
chr10	11537078	11537175	reg1030104.p1	4.390	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-329634	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-329680	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-329701	+	NM_001080491	37147	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	116510	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	247272	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.830069	CTCF.p2:2:0.830
chr11	2360144	2360253	reg1030892.p2	4.390	+	TSC_hg19_v1_chr11_+_2323366 AY039001 AK310116 CU677677 AK298692	-36812	+	TSC_hg19_v1_chr11_+_2323260 AK128812 AK307638 BC016693 NM_139022	-36947	+	TSC_hg19_v1_chr11_-_2323122 AK290921 BC028070 AK310172 NM_001142946 AB029488	-37021	-	TSC_hg19_v1_chr11_+_2398543 NM_004356 BC093047 M33680	38349	+	TSC_hg19_v1_chr11_+_2421990 BC006091	61798	+	AF125568 NM_005706	63324	+	AY039001|TSPAN32|10077|tetraspanin 32##AK310116|TSPAN32|10077|tetraspanin 32##AK298692|TSPAN32|10077|tetraspanin 32##AK128812|TSPAN32|10077|tetraspanin 32##AK307638|TSPAN32|10077|tetraspanin 32##BC016693|TSPAN32|10077|tetraspanin 32##NM_139022|TSPAN32|10077|tetraspanin 32##AK290921|C11orf21|29125|chromosome 11 open reading frame 21##BC028070|C11orf21|29125|chromosome 11 open reading frame 21##AK310172|C11orf21|29125|chromosome 11 open reading frame 21##NM_001142946|C11orf21|29125|chromosome 11 open reading frame 21##AB029488|C11orf21|29125|chromosome 11 open reading frame 21##NM_004356|CD81|975|CD81 molecule##BC093047|CD81|975|CD81 molecule##M33680|CD81|975|CD81 molecule##BC006091|TSSC4|10078|tumor suppressing subtransferable candidate 4##AF125568|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_005706|TSSC4|10078|tumor suppressing subtransferable candidate 4	0.906117	CTCF.p2:-16:0.906
chr12	121103899	121104036	reg1033572.p1	4.390	+	AF169148 AF169149 NM_004276 NM_031205	-15597	+	BC030201 NM_001033677	-25546	+	AK223206 TSC_hg19_v1_chr12_-_121019185 AK303144 AF070660 AF117232 AJ306296 BC012505 NM_015918 NM_198202	-84779	-	TSC_hg19_v1_chr12_+_121124951 NM_014730	20971	+	TSC_hg19_v1_chr12_+_121124973 D63486 BC016297 BC000371	21072	+	CR936818 TSC_hg19_v1_chr12_+_121132759	28751	+	AF169148|CABP1|9478|calcium binding protein 1##AF169149|CABP1|9478|calcium binding protein 1##NM_004276|CABP1|9478|calcium binding protein 1##NM_031205|CABP1|9478|calcium binding protein 1##BC030201|CABP1|9478|calcium binding protein 1##NM_001033677|CABP1|9478|calcium binding protein 1##AK223206|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK303144|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF070660|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF117232|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AJ306296|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##BC012505|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015918|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_198202|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_014730|MLEC|9761|malectin##D63486|MLEC|9761|malectin##BC016297|MLEC|9761|malectin##BC000371|MLEC|9761|malectin	0.0	
chr12	90356652	90356765	reg1028590.p1	4.390	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-253163	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-254021	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-306857	-	BC026075 BC024183 BC027600 BC034491 NM_152638	992243	-	U59111 TSC_hg19_v1_chr12_-_91398750	1042039	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	1042071	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.018678	
chr15	75397199	75397367	reg1031596.p1	4.390	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-81302	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-81355	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-109376	+	AK128205 TSC_hg19_v1_chr15_+_75491259	93963	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	96929	+	BC110367 TSC_hg19_v1_chr15_+_75494233	96950	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chr19	11551784	11551862	reg1031608.p2	4.390	+	AB385574 AF144075 TSC_hg19_v1_chr19_+_11546995 BC013586	-4854	+	TSC_hg19_v1_chr19_+_11546486 AK290433	-5281	+	J03075 TSC_hg19_v1_chr19_+_11546469 Z36798 AK225390	-5355	+	BC080533 BC011875 TSC_hg19_v1_chr19_-_11564576	12749	-	TSC_hg19_v1_chr19_-_11565617 BC068222	13805	-	AY036909 L26405 D26158 BC014144 NM_001420 NM_032281 TSC_hg19_v1_chr19_-_11591862	39830	-	AF144075|PRKCSH|5589|protein kinase C substrate 80K-H##BC013586|PRKCSH|5589|protein kinase C substrate 80K-H##AK290433|PRKCSH|5589|protein kinase C substrate 80K-H##J03075|PRKCSH|5589|protein kinase C substrate 80K-H##Z36798|PRKCSH|5589|protein kinase C substrate 80K-H##AK225390|PRKCSH|5589|protein kinase C substrate 80K-H##BC080533|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC011875|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##AY036909|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##L26405|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##D26158|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC014144|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_001420|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_032281|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	0.809521	CTCF.p2:-5:0.810
chr19	6412537	6412665	reg1031343.p2	4.390	+	BT007097 CR456798 CU680466 AB385238 DQ890597 DQ893766 X64002 BC000120 BC013007 TSC_hg19_v1_chr19_-_6393176 AK315240 X64037 AK293124 NM_002096	-19454	-	AB528873 AF040962 NM_004158 BC143894	-36725	-	AK311956 TSC_hg19_v1_chr19_+_6372805 AK223336	-39789	+	U69126 TSC_hg19_v1_chr19_-_6424561	11952	-	TSC_hg19_v1_chr19_-_6424790 BC085004	12187	-	U94832 TSC_hg19_v1_chr19_-_6424804	12203	-	BT007097|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##CR456798|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##DQ890597|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##DQ893766|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##X64002|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##BC000120|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##BC013007|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##AK315240|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##X64037|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##AK293124|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##NM_002096|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##AF040962|PSPN|5623|persephin##NM_004158|PSPN|5623|persephin##AK311956|ALKBH7|84266|alkB, alkylation repair homolog 7 (E. coli)##AK223336|ALKBH7|84266|alkB, alkylation repair homolog 7 (E. coli)##U69126|KHSRP|8570|KH-type splicing regulatory protein##BC085004|KHSRP|8570|KH-type splicing regulatory protein##U94832|KHSRP|8570|KH-type splicing regulatory protein	0.81759	CTCF.p2:0:0.818
chr2	230296208	230296304	reg1031868.p2	4.390	+	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	-160251	-	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-1249894	-	AK097409 NM_178821 BC036377 AK098821 AK301861	-1559904	+	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	282992	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	490405	-	TSC_hg19_v1_chr2_-_230786712 AK310971	490493	-	AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12	0.917654	CTCF.p2:5:0.918
chr22	42510848	42510978	reg1034060.p2	4.390	+	TSC_hg19_v1_chr22_+_42486980 AK123630 BC039542	-23887	+	TSC_hg19_v1_chr22_-_42486777 AB528478 CU013129 CU013417 CR456529 NM_002490	-24087	-	TSC_hg19_v1_chr22_-_42486764 CR456714 CR541997 CU678184 DQ892966 DQ896214 BC002772 AF047182 AK316562 AK291874	-24161	-	AB463001 CU013213 CU013501 M20403 X08006 BC066877 BC067432 TSC_hg19_v1_chr22_-_42526809 BC106757 BC106758 BC126858 CR456430 BC075023 BC075024	15894	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	15968	-	AB527391 NM_005650 NM_181492	100464	-	AK123630|LOC100132273|100132273|uncharacterized LOC100132273##BC039542|LOC100132273|100132273|uncharacterized LOC100132273##CU013129|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CU013417|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR456529|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##NM_002490|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR456714|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CR541997|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##DQ892966|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##DQ896214|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##BC002772|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##AF047182|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##AK316562|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##AK291874|NDUFA6|4700|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa##CU013213|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013501|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##M20403|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##X08006|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC066877|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC067432|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106757|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106758|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC126858|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CR456430|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075023|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075024|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)	0.868423	CTCF.p2:-7:0.868
chr3	72213122	72213211	reg1032827.p1	4.390	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-378895	-	AK313656 NM_173359	-409243	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-409644	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	684382	-	BC017274 TSC_hg19_v1_chr3_-_72897575	684409	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	684426	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr4	109088204	109088288	reg1034173.p2	4.390	+	AK303272 NM_001166119	-332	-	TSC_hg19_v1_chr4_+_108911045 BC000306 AM392952 AM393255 DQ891419 DQ894593 AB528829 AF001902	-177173	+	AK314444 TSC_hg19_v1_chr4_+_108911011	-177234	+	TSC_hg19_v1_chr4_+_109088684 BC020624	438	+	TSC_hg19_v1_chr4_-_109090113 AF288571 AK225772 NM_001130713 NM_001130714 NM_016269	1553	-	BC106009 NM_000995 D28420 TSC_hg19_v1_chr4_+_109541732 BC070208 NM_033625 AK055920 BC001773	453520	+	AK303272|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1##BC000306|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ891419|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ894593|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001902|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK314444|HADH|3033|hydroxyacyl-CoA dehydrogenase##BC020624|LOC641518|641518|uncharacterized LOC641518##AF288571|LEF1|51176|lymphoid enhancer-binding factor 1##AK225772|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1##NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1##BC106009|RPL34|6164|ribosomal protein L34##NM_000995|RPL34|6164|ribosomal protein L34##D28420|RPL34|6164|ribosomal protein L34##BC070208|RPL34|6164|ribosomal protein L34##NM_033625|RPL34|6164|ribosomal protein L34##AK055920|RPL34|6164|ribosomal protein L34##BC001773|RPL34|6164|ribosomal protein L34	0.0	
chr4	123852173	123852277	reg1031312.p2	4.390	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-7973	+	AF019632 AK294450 NM_198041	-8085	-	TSC_hg19_v1_chr4_-_123843731 DQ893139 DQ896423 BC009842 AB209758 AK291871 AF019633 NM_007083	-8464	-	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	465731	+	AK026960 BC063856 NM_005841	468448	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	1781589	-	NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AF019632|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK294450|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_198041|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50	0.426378	CTCF.p2:8:0.426
chr6	108298542	108298674	reg1029645.p2	4.390	+	TSC_hg19_v1_chr6_-_108279413 NM_007214	-19162	-	TSC_hg19_v1_chr6_-_108279378 BC023598	-19216	-	TSC_hg19_v1_chr6_-_108279366 BC009066	-19239	-	TSC_hg19_v1_chr6_-_108395868 AK075012	97255	-	TSC_hg19_v1_chr6_-_108395920 BC068581	97312	-	TSC_hg19_v1_chr6_-_108395924 AF533891 AY358795 BC059412 AK129854	97322	-	NM_007214|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC023598|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC009066|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK075012|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC068581|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AF533891|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AY358795|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC059412|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AK129854|OSTM1|28962|osteopetrosis associated transmembrane protein 1	0.993062	CTCF.p2:-11:0.993
chr6	152964217	152964337	reg1031789.p1	4.390	+	AF495910 NM_182961	-5744	-	AF535142 NM_033071 TSC_hg19_v1_chr6_-_152958011	-6235	-	AK056122 TSC_hg19_v1_chr6_-_152702456 BC039121	-261803	-	NM_025107 AF527367 AK024922 BC128463 BC128464 GU997693 AK021612 BC022556 AL834500 CU692694	54828	+	AK313950 BC009794 NM_003381 NM_194435 AK291959 M36634	107709	+	AY079515 DQ891922 DQ895106 BC018905 AF129535 TSC_hg19_v1_chr6_-_153304175 AK026197 AK314456 NM_012177	339870	-	AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AK056122|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##BC039121|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_025107|MYCT1|80177|myc target 1##AF527367|MYCT1|80177|myc target 1##AK024922|MYCT1|80177|myc target 1##BC128463|MYCT1|80177|myc target 1##BC128464|MYCT1|80177|myc target 1##GU997693|MYCT1|80177|myc target 1##AK021612|MYCT1|80177|myc target 1##BC022556|MYCT1|80177|myc target 1##AL834500|MYCT1|80177|myc target 1##AK313950|VIP|7432|vasoactive intestinal peptide##BC009794|VIP|7432|vasoactive intestinal peptide##NM_003381|VIP|7432|vasoactive intestinal peptide##NM_194435|VIP|7432|vasoactive intestinal peptide##AK291959|VIP|7432|vasoactive intestinal peptide##M36634|VIP|7432|vasoactive intestinal peptide##AY079515|FBXO5|26271|F-box protein 5##DQ891922|FBXO5|26271|F-box protein 5##DQ895106|FBXO5|26271|F-box protein 5##BC018905|FBXO5|26271|F-box protein 5##AF129535|FBXO5|26271|F-box protein 5##AK026197|FBXO5|26271|F-box protein 5##AK314456|FBXO5|26271|F-box protein 5##NM_012177|FBXO5|26271|F-box protein 5	0.933649	CTCF.p2:16:0.934
chr20	33460686	33460787	reg1030181.p1	4.389	+	TSC_hg19_v1_chr20_-_33460644 AY138815 BC040030 AK124788 AK098355 BC101371 BC141843 BC101370 BC101372 AK299494 BC033745 NM_178026	-111	-	TSC_hg19_v1_chr20_-_33413434 BC069829 BC035676 NM_001242539 NM_014071 BC047886	-47322	-	AL122050 TSC_hg19_v1_chr20_+_33299806	-160943	+	NM_001242393 TSC_hg19_v1_chr20_+_33462793 AK000162	2066	+	NM_001076552 NM_018677 TSC_hg19_v1_chr20_+_33464382 AK000188 AK025990 AK098026 AK293634	3625	+	BC012172 TSC_hg19_v1_chr20_+_33464414 AK092281 AF263614 BC073846	3747	+	AY138815|GGT7|2686|gamma-glutamyltransferase 7##BC040030|GGT7|2686|gamma-glutamyltransferase 7##AK124788|GGT7|2686|gamma-glutamyltransferase 7##BC101371|GGT7|2686|gamma-glutamyltransferase 7##BC141843|GGT7|2686|gamma-glutamyltransferase 7##BC101370|GGT7|2686|gamma-glutamyltransferase 7##BC101372|GGT7|2686|gamma-glutamyltransferase 7##AK299494|GGT7|2686|gamma-glutamyltransferase 7##BC033745|GGT7|2686|gamma-glutamyltransferase 7##NM_178026|GGT7|2686|gamma-glutamyltransferase 7##BC069829|NCOA6|23054|nuclear receptor coactivator 6##BC035676|NCOA6|23054|nuclear receptor coactivator 6##NM_001242539|NCOA6|23054|nuclear receptor coactivator 6##NM_014071|NCOA6|23054|nuclear receptor coactivator 6##BC047886|NCOA6|23054|nuclear receptor coactivator 6##AL122050|TP53INP2|58476|tumor protein p53 inducible nuclear protein 2##NM_001242393|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK000162|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##NM_001076552|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##NM_018677|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK000188|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK025990|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK098026|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK293634|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##BC012172|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AK092281|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##AF263614|ACSS2|55902|acyl-CoA synthetase short-chain family member 2##BC073846|ACSS2|55902|acyl-CoA synthetase short-chain family member 2	0.410098	CTCF.p2:-17:0.325
chr4	7962577	7962758	reg1031124.p1	4.389	+	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	-21279	-	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	-526011	-	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-768272	+	TSC_hg19_v1_chr4_-_8073714 AK094798	111049	-	TSC_hg19_v1_chr4_-_8129388 AK301060	166718	-	DQ413176 AJ748600 AJ748601 TSC_hg19_v1_chr4_-_8160541 BC122567 AK130044 AK094754 BC067214 NM_001130083 NM_001130084 NM_001130085 NM_001130086 NM_001130087 NM_001130088 NM_032432	197867	-	AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2##DQ413176|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748600|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748601|ABLIM2|84448|actin binding LIM protein family, member 2##BC122567|ABLIM2|84448|actin binding LIM protein family, member 2##AK130044|ABLIM2|84448|actin binding LIM protein family, member 2##AK094754|ABLIM2|84448|actin binding LIM protein family, member 2##BC067214|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130083|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130084|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130085|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130086|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130087|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130088|ABLIM2|84448|actin binding LIM protein family, member 2##NM_032432|ABLIM2|84448|actin binding LIM protein family, member 2	0.0	
chr9	38068764	38068880	reg1033932.p1	4.389	+	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	-164456	-	AK091407 AX746962 TSC_hg19_v1_chr9_-_37904125 BC008500 BC063563	-164693	-	TSC_hg19_v1_chr9_+_37800815 BC108686	-268014	+	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	319	-	X75342 NM_003028 TSC_hg19_v1_chr9_-_38069225 BC094765	419	-	TSC_hg19_v1_chr9_+_38392669 NM_000692	323851	+	AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##AK091407|MCART1|92014|mitochondrial carrier triple repeat 1##BC008500|MCART1|92014|mitochondrial carrier triple repeat 1##BC063563|MCART1|92014|mitochondrial carrier triple repeat 1##BC108686|DCAF10|79269|DDB1 and CUL4 associated factor 10##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B##X75342|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_003028|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1	0.712429	CTCF.p2:-14:0.712
chr11	46559157	46559338	reg1001716.p1	4.388	+	BC119775 BC119817 AF385590 AF498918 NM_000741 BC095546 BC137535	-151116	-	NM_001012333 TSC_hg19_v1_chr11_+_46403310	-155941	+	TSC_hg19_v1_chr11_+_46403285 X55110	-155960	+	BC045609 NM_017749 AK302808	53695	-	AL834190 TSC_hg19_v1_chr11_-_46615568 AK057896 AK000301 AB051523	56288	-	AK304530 TSC_hg19_v1_chr11_-_46615589	56356	-	BC119775|CHRM4|1132|cholinergic receptor, muscarinic 4##BC119817|CHRM4|1132|cholinergic receptor, muscarinic 4##AF385590|CHRM4|1132|cholinergic receptor, muscarinic 4##AF498918|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_000741|CHRM4|1132|cholinergic receptor, muscarinic 4##BC095546|CHRM4|1132|cholinergic receptor, muscarinic 4##BC137535|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_001012333|MDK|4192|midkine (neurite growth-promoting factor 2)##X55110|MDK|4192|midkine (neurite growth-promoting factor 2)##BC045609|AMBRA1|55626|autophagy/beclin-1 regulator 1##NM_017749|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK302808|AMBRA1|55626|autophagy/beclin-1 regulator 1##AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1##AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1	0.012594	
chr19	19453646	19453752	reg1029257.p1	4.388	+	TSC_hg19_v1_chr19_+_19431662 AB385396	-22035	+	TSC_hg19_v1_chr19_+_19431637 NM_015329 AB020699	-22065	+	AK096152 AK292085 AK294618 AK301119 BC119728 BC119729 BC142988 TSC_hg19_v1_chr19_-_19431319 NM_172231	-22348	-	TSC_hg19_v1_chr19_+_19496634 NM_017660 AK303482	43007	+	AB464723 DQ891603 DQ894797 AF329483 AK058166 AK313767 BC014611 NM_032037 AF348077	172666	-	TSC_hg19_v1_chr19_+_19626536 AF261134	172866	+	NM_015329|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AB020699|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AK096152|SUGP1|57794|SURP and G patch domain containing 1##AK292085|SUGP1|57794|SURP and G patch domain containing 1##AK294618|SUGP1|57794|SURP and G patch domain containing 1##AK301119|SUGP1|57794|SURP and G patch domain containing 1##BC119728|SUGP1|57794|SURP and G patch domain containing 1##BC119729|SUGP1|57794|SURP and G patch domain containing 1##BC142988|SUGP1|57794|SURP and G patch domain containing 1##NM_172231|SUGP1|57794|SURP and G patch domain containing 1##NM_017660|GATAD2A|54815|GATA zinc finger domain containing 2A##AK303482|GATAD2A|54815|GATA zinc finger domain containing 2A##DQ891603|TSSK6|83983|testis-specific serine kinase 6##DQ894797|TSSK6|83983|testis-specific serine kinase 6##AF329483|TSSK6|83983|testis-specific serine kinase 6##AK058166|TSSK6|83983|testis-specific serine kinase 6##AK313767|TSSK6|83983|testis-specific serine kinase 6##BC014611|TSSK6|83983|testis-specific serine kinase 6##NM_032037|TSSK6|83983|testis-specific serine kinase 6##AF348077|TSSK6|83983|testis-specific serine kinase 6##AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	0.781723	CTCF.p2:18:0.765
chr22	43045705	43045833	reg1030687.p2	4.388	+	TSC_hg19_v1_chr22_-_43045399 NM_000398	-366	-	TSC_hg19_v1_chr22_-_43045347 AJ010116 AJ010117 AJ010118 BT009821 AB463000 CU012995 CU013283 CR456435 AF361370 Y09501 BC004821	-437	-	TSC_hg19_v1_chr22_-_43042979 NM_001129819 NM_001171661 NM_007326	-2784	-	AK074388 TSC_hg19_v1_chr22_-_43089917 AJ245581 CU677819 AB590407 DQ891619 DQ894811	44138	-	TSC_hg19_v1_chr22_-_43116877 BC017068 GU902275 GU902276 GU902277 GU902278 GU902279 GU902280 GU902281 AK130208 NM_017436	71086	-	TSC_hg19_v1_chr22_-_43117270 AK312927	71508	-	NM_000398|CYB5R3|1727|cytochrome b5 reductase 3##AJ010116|CYB5R3|1727|cytochrome b5 reductase 3##AJ010117|CYB5R3|1727|cytochrome b5 reductase 3##AJ010118|CYB5R3|1727|cytochrome b5 reductase 3##BT009821|CYB5R3|1727|cytochrome b5 reductase 3##CU012995|CYB5R3|1727|cytochrome b5 reductase 3##CU013283|CYB5R3|1727|cytochrome b5 reductase 3##CR456435|CYB5R3|1727|cytochrome b5 reductase 3##AF361370|CYB5R3|1727|cytochrome b5 reductase 3##Y09501|CYB5R3|1727|cytochrome b5 reductase 3##BC004821|CYB5R3|1727|cytochrome b5 reductase 3##NM_001129819|CYB5R3|1727|cytochrome b5 reductase 3##NM_001171661|CYB5R3|1727|cytochrome b5 reductase 3##NM_007326|CYB5R3|1727|cytochrome b5 reductase 3##AK074388|A4GALT|53947|alpha 1,4-galactosyltransferase##AJ245581|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ891619|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ894811|A4GALT|53947|alpha 1,4-galactosyltransferase##BC017068|A4GALT|53947|alpha 1,4-galactosyltransferase##NM_017436|A4GALT|53947|alpha 1,4-galactosyltransferase##AK312927|A4GALT|53947|alpha 1,4-galactosyltransferase	0.012014	
chr3	44087239	44087399	reg1020510.p1	4.388	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-354898	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-423806	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-423881	-	AK093476 AX748152 NM_001145030	196058	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	292311	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	292628	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.0	
chr4	159114453	159114558	reg1030110.p1	4.388	+	AY358785 AK172805 BC043193 NM_001031700 NM_001128424	-20323	-	NM_016613	-20788	-	TSC_hg19_v1_chr4_-_159093526 AL832589	-20973	-	NM_018342	16895	+	BC036551 BC048117 BC054487 TSC_hg19_v1_chr4_+_159131677 BC060875 BC035811 BC026318	17169	+	NM_001253727 NM_001253728 NM_001253729 NM_001253730 NM_001253732 NM_001253733 NM_021634 BX647985 BX647975 BX647980 AK307889 AK300379 AK312470 TSC_hg19_v1_chr4_+_159443033 AK295040 BC113617 BC143557 BC143558 BC143559 BC112142 BC143556 AK294694 AB208943 AF190500 AY899848 AY899849 AY899850 HQ258496	328491	+	AY358785|FAM198B|51313|family with sequence similarity 198, member B##AK172805|FAM198B|51313|family with sequence similarity 198, member B##BC043193|FAM198B|51313|family with sequence similarity 198, member B##NM_001031700|FAM198B|51313|family with sequence similarity 198, member B##NM_001128424|FAM198B|51313|family with sequence similarity 198, member B##NM_016613|FAM198B|51313|family with sequence similarity 198, member B##AL832589|FAM198B|51313|family with sequence similarity 198, member B##NM_018342|TMEM144|55314|transmembrane protein 144##BC036551|TMEM144|55314|transmembrane protein 144##BC048117|TMEM144|55314|transmembrane protein 144##BC054487|TMEM144|55314|transmembrane protein 144##BC060875|TMEM144|55314|transmembrane protein 144##BC035811|TMEM144|55314|transmembrane protein 144##BC026318|TMEM144|55314|transmembrane protein 144##NM_001253727|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253728|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253729|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253730|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253732|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253733|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_021634|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647985|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647975|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647980|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK307889|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK300379|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK312470|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK295040|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC113617|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143557|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143558|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143559|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC112142|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143556|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK294694|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AB208943|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AF190500|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899848|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899849|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899850|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##HQ258496|RXFP1|59350|relaxin/insulin-like family peptide receptor 1	0.724884	CTCF.p2:6:0.725
chr7	127493289	127493361	reg1034935.p1	4.388	+	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	-200989	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	-201089	+	TSC_hg19_v1_chr7_+_127292198 NM_014390	-201143	+	BC111561 BC111745 AF196976 AJ297858 NM_022143 AK172751 TSC_hg19_v1_chr7_-_127671066 AK314047	177711	-	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	388008	+	CU680694 TSC_hg19_v1_chr7_-_127983862	490529	-	BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##NM_014390|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BC111561|LRRC4|64101|leucine rich repeat containing 4##BC111745|LRRC4|64101|leucine rich repeat containing 4##AF196976|LRRC4|64101|leucine rich repeat containing 4##AJ297858|LRRC4|64101|leucine rich repeat containing 4##NM_022143|LRRC4|64101|leucine rich repeat containing 4##AK172751|LRRC4|64101|leucine rich repeat containing 4##AK314047|LRRC4|64101|leucine rich repeat containing 4##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin	0.0	
chr9	95090642	95090759	reg1028224.p1	4.388	+	TSC_hg19_v1_chr9_+_95088234 BX537851 BC071726 AK307435 CU687146	-2472	+	TSC_hg19_v1_chr9_+_95087934 AK092603 AX747625	-2753	+	AB105104 NM_017948	-2844	-	AF086912 AF100758 NM_014057 NM_033014 AK289628 AK295433	76203	-	AB000114 AK313055 AK225922 AY358872 BC046356 NM_005014	95997	-	AK027359 AK304501 TSC_hg19_v1_chr9_-_95244656 AK172737	153947	-	BX537851|CENPP|401541|centromere protein P##BC071726|CENPP|401541|centromere protein P##AK307435|CENPP|401541|centromere protein P##AK092603|CENPP|401541|centromere protein P##AB105104|NOL8|55035|nucleolar protein 8##NM_017948|NOL8|55035|nucleolar protein 8##AF086912|OGN|4969|osteoglycin##AF100758|OGN|4969|osteoglycin##NM_014057|OGN|4969|osteoglycin##NM_033014|OGN|4969|osteoglycin##AK289628|OGN|4969|osteoglycin##AK295433|OGN|4969|osteoglycin##AB000114|OMD|4958|osteomodulin##AK313055|OMD|4958|osteomodulin##AK225922|OMD|4958|osteomodulin##AY358872|OMD|4958|osteomodulin##BC046356|OMD|4958|osteomodulin##NM_005014|OMD|4958|osteomodulin##AK027359|ASPN|54829|asporin##AK304501|ASPN|54829|asporin##AK172737|ASPN|54829|asporin	0.0	
chr18	41143922	41144024	reg1031943.p1	4.387	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-286544	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-448404	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-1608740	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	1116141	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	1116895	+	NM_001242692 AK292422	1648979	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.020621	
chr3	159647524	159647705	reg1007600.p2	4.387	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	-89755	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	-89921	+	TSC_hg19_v1_chr3_+_159481881 AK309223	-165652	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	59118	+	TSC_hg19_v1_chr3_+_159943306 NM_001168214	295723	+	BC031660 TSC_hg19_v1_chr3_+_159943777	296089	+	BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##AK309223|SCHIP1|29970|schwannomin interacting protein 1##NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80##BC031660|C3orf80|401097|chromosome 3 open reading frame 80	0.0	
chr3	56836153	56836220	reg1009705.p1	4.387	+	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	-275	-	AK293864 AB209661 NM_001128616	-26517	-	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-118979	-	AY221117 NM_181727 BC126274 BC136498	258317	+	AF433662 AK302493 NM_001128615	277127	-	AF458067 TSC_hg19_v1_chr3_-_57199347	363147	-	AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12##AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF458067|IL17RD|54756|interleukin 17 receptor D	0.0	
chr4	76106413	76106515	reg1035412.p2	4.387	+	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	-248092	+	BC011618 S55606 AB109441 NM_001729	-386681	-	BC009799 M30704 NM_001657	-625836	+	TSC_hg19_v1_chr4_-_76439504 AK309555 AK308754 AB528599 AF247041 CU689096 CU690404 GQ129342 GQ129343 GQ250944 GQ250945 GQ250946 JF691538 JF691539 AB209072 AF255666 AY888047 GU937000 AF305424	333052	-	TSC_hg19_v1_chr4_-_76439614 AK091501 AX747022 BC031057 BC047393 NM_001008925 NM_001009922 NM_015436	333150	-	NM_144721 TSC_hg19_v1_chr4_+_76439670 AK310575 AK056959 AK303658 AK308914 AK309187 AL833350 BX647579 AK313765	333227	+	NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##AK309555|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK308754|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF247041|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129342|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129343|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250944|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250945|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250946|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AB209072|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF255666|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AY888047|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GU937000|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF305424|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK091501|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC031057|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC047393|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001008925|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001009922|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_015436|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_144721|THAP6|152815|THAP domain containing 6##AK310575|THAP6|152815|THAP domain containing 6##AK056959|THAP6|152815|THAP domain containing 6##AK303658|THAP6|152815|THAP domain containing 6##AK308914|THAP6|152815|THAP domain containing 6##AK309187|THAP6|152815|THAP domain containing 6##AL833350|THAP6|152815|THAP domain containing 6##BX647579|THAP6|152815|THAP domain containing 6##AK313765|THAP6|152815|THAP domain containing 6	0.0	
chr8	102855514	102855674	reg1024991.p1	4.387	+	NM_032041	-52156	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-52394	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-52411	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	280929	-	NM_001040630	281540	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	395579	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.0	
chrX	119433922	119434021	reg1033218.p2	4.387	+	TSC_hg19_v1_chrX_+_119384690 AX721150	-49281	+	TSC_hg19_v1_chrX_+_119384666 BC042753 NM_006777 NM_001184742 BX538016 AL833604 AK312321 BX538101	-49385	+	BC113730 BC113732 TSC_hg19_v1_chrX_-_119379092 BC022359 AK093895 AX748357	-54893	-	TSC_hg19_v1_chrX_-_119445289 AK289684 BC047054	11314	-	TSC_hg19_v1_chrX_-_119445320 AF450484 AK056403 NM_001104544 NM_001104545 NM_017938	11382	-	AK309999 NM_001142447 NM_012069 AF158383 AF158384 BC117227 BC143404 BC143406 BC143407 HQ258396	62009	+	BC042753|ZBTB33|10009|zinc finger and BTB domain containing 33##NM_006777|ZBTB33|10009|zinc finger and BTB domain containing 33##NM_001184742|ZBTB33|10009|zinc finger and BTB domain containing 33##BX538016|ZBTB33|10009|zinc finger and BTB domain containing 33##AL833604|ZBTB33|10009|zinc finger and BTB domain containing 33##AK312321|ZBTB33|10009|zinc finger and BTB domain containing 33##BX538101|ZBTB33|10009|zinc finger and BTB domain containing 33##BC113730|NKAPP1|158801|NFKB activating protein pseudogene 1##BC113732|NKAPP1|158801|NFKB activating protein pseudogene 1##BC022359|NKAPP1|158801|NFKB activating protein pseudogene 1##AK093895|NKAPP1|158801|NFKB activating protein pseudogene 1##AK289684|FAM70A|55026|family with sequence similarity 70, member A##BC047054|FAM70A|55026|family with sequence similarity 70, member A##AF450484|FAM70A|55026|family with sequence similarity 70, member A##AK056403|FAM70A|55026|family with sequence similarity 70, member A##NM_001104544|FAM70A|55026|family with sequence similarity 70, member A##NM_001104545|FAM70A|55026|family with sequence similarity 70, member A##NM_017938|FAM70A|55026|family with sequence similarity 70, member A##AK309999|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##NM_001142447|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##NM_012069|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF158383|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF158384|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC117227|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143404|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143406|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143407|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##HQ258396|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide	0.049089	
chr1	203258843	203259009	reg1028870.p2	4.386	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-60111	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-103000	-	BC008568 TSC_hg19_v1_chr1_-_203155877 AK312911	-103038	-	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	15763	+	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	58458	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	61283	-	U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.0	
chr12	57917669	57917801	reg1026089.p2	4.386	+	TSC_hg19_v1_chr12_+_57916642 AK056399 AK296990 NM_052897 BC065530	-1085	+	TSC_hg19_v1_chr12_-_57914295 AK316581 BC003637 BC107859 S40706 AY461580 NM_001195053 NM_001195054 NM_001195055 NM_001195056 NM_001195057 NM_004083	-3441	-	AK092986 AK222767 AX747839 TSC_hg19_v1_chr12_+_57881853 AK290857 BC011639 X94754 BC002384 BC006328 BC011849 AB590802 BT007338 BC015011	-35856	+	AL834230 TSC_hg19_v1_chr12_+_57920572	2763	+	AY189155 CU674356 AB590544 AK292364 BC009468 U50733 TSC_hg19_v1_chr12_-_57940961 AK096242 BC014083 AK314705 AK098794 AK222693 BC000718 NM_006400 AK055682	23193	-	AB290174 BC140009 TSC_hg19_v1_chr12_+_57943796	26055	+	AK056399|MBD6|114785|methyl-CpG binding domain protein 6##AK296990|MBD6|114785|methyl-CpG binding domain protein 6##NM_052897|MBD6|114785|methyl-CpG binding domain protein 6##BC065530|MBD6|114785|methyl-CpG binding domain protein 6##AK316581|DDIT3|1649|DNA-damage-inducible transcript 3##BC003637|DDIT3|1649|DNA-damage-inducible transcript 3##BC107859|DDIT3|1649|DNA-damage-inducible transcript 3##S40706|DDIT3|1649|DNA-damage-inducible transcript 3##AY461580|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195053|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195054|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195055|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195056|DDIT3|1649|DNA-damage-inducible transcript 3##NM_001195057|DDIT3|1649|DNA-damage-inducible transcript 3##NM_004083|DDIT3|1649|DNA-damage-inducible transcript 3##AK092986|MARS|4141|methionyl-tRNA synthetase##AK222767|MARS|4141|methionyl-tRNA synthetase##AK290857|MARS|4141|methionyl-tRNA synthetase##BC011639|MARS|4141|methionyl-tRNA synthetase##X94754|MARS|4141|methionyl-tRNA synthetase##BC002384|MARS|4141|methionyl-tRNA synthetase##BC006328|MARS|4141|methionyl-tRNA synthetase##BC011849|MARS|4141|methionyl-tRNA synthetase##BT007338|MARS|4141|methionyl-tRNA synthetase##BC015011|MARS|4141|methionyl-tRNA synthetase##AL834230|MBD6|114785|methyl-CpG binding domain protein 6##AY189155|DCTN2|10540|dynactin 2 (p50)##AK292364|DCTN2|10540|dynactin 2 (p50)##BC009468|DCTN2|10540|dynactin 2 (p50)##U50733|DCTN2|10540|dynactin 2 (p50)##AK096242|DCTN2|10540|dynactin 2 (p50)##BC014083|DCTN2|10540|dynactin 2 (p50)##AK314705|DCTN2|10540|dynactin 2 (p50)##AK098794|DCTN2|10540|dynactin 2 (p50)##AK222693|DCTN2|10540|dynactin 2 (p50)##BC000718|DCTN2|10540|dynactin 2 (p50)##NM_006400|DCTN2|10540|dynactin 2 (p50)##AK055682|DCTN2|10540|dynactin 2 (p50)##AB290174|KIF5A|3798|kinesin family member 5A##BC140009|KIF5A|3798|kinesin family member 5A	0.0	
chr1	44376108	44376207	reg1027314.p1	4.386	+	AK301829 AY051143 NM_006279 NM_174963 NM_174964 NM_174965 NM_174966 NM_174967 NM_174968 NM_174969 NM_174970 NM_174971 TSC_hg19_v1_chr1_+_44173217 BC050380	-202939	+	TSC_hg19_v1_chr1_-_44173037 BC094867	-203134	-	BC002558 TSC_hg19_v1_chr1_+_44115828 AB014577	-260313	+	AF120274 NM_001136215 NM_057090 NM_057091	22834	+	TSC_hg19_v1_chr1_+_44412483 NM_014652	36304	+	TSC_hg19_v1_chr1_+_44412625 AB018267	36453	+	AK301829|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##AY051143|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_006279|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174963|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174964|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174965|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174966|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174967|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174968|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174969|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174970|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174971|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC050380|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC094867|LOC100132774|100132774|uncharacterized LOC100132774##BC002558|KDM4A|9682|lysine (K)-specific demethylase 4A##AB014577|KDM4A|9682|lysine (K)-specific demethylase 4A##AF120274|ARTN|9048|artemin##NM_001136215|ARTN|9048|artemin##NM_057090|ARTN|9048|artemin##NM_057091|ARTN|9048|artemin##NM_014652|IPO13|9670|importin 13##AB018267|IPO13|9670|importin 13	0.0	
chr16	17497774	17497954	reg1030073.p1	4.386	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-1171334	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1171376	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-1171382	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	66941	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1075527	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1300232	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr16	68754275	68754456	reg1023193.p2	4.386	+	X63629 TSC_hg19_v1_chr16_+_68679239 AB527800 EU832319 EU832404	-75111	+	TSC_hg19_v1_chr16_+_68679201 AK296968 AK312554 AK225396	-75160	+	NM_001793	-76215	+	AK312551 TSC_hg19_v1_chr16_+_68771194 AK297913 EU709494 NM_004360 BC141838 BC146662 L08599	16836	+	BC144283 TSC_hg19_v1_chr16_+_68771216 AK290012 Z13009	16854	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	16880	+	X63629|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##EU832319|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##EU832404|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK296968|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK312554|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK225396|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##NM_001793|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK312551|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK297913|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##EU709494|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##NM_004360|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC141838|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC146662|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##L08599|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC144283|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK290012|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##Z13009|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)	0.0	
chr17	17753504	17753642	reg1031591.p1	4.386	+	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	-13249	-	TSC_hg19_v1_chr17_-_17740301 U00968 BC063281	-13278	-	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	-26669	-	TSC_hg19_v1_chr17_-_17875715 AK124331 AK295111 AK301944 AK303305 AK299872 AF467441 BC051650 AK294846 NM_001033551 NM_001082968	122168	-	NM_001130090 NM_001130091 NM_001130092 NM_031294 TSC_hg19_v1_chr17_+_17876186 BC047873 AL136926 AK293011 BC040276 BC050419 BC050665 AK093317 AX748051	122627	+	AM393241 CU678578 CU689282 AB528073 AF070584 BC032126 AF052185 AY203943 TSC_hg19_v1_chr17_-_17942481 BC004114 NM_145691 AK290257 AK294487 AK296382	188830	-	BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1##U00968|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC063281|SREBF1|6720|sterol regulatory element binding transcription factor 1##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK124331|TOM1L2|146691|target of myb1-like 2 (chicken)##AK295111|TOM1L2|146691|target of myb1-like 2 (chicken)##AK301944|TOM1L2|146691|target of myb1-like 2 (chicken)##AK303305|TOM1L2|146691|target of myb1-like 2 (chicken)##AK299872|TOM1L2|146691|target of myb1-like 2 (chicken)##AF467441|TOM1L2|146691|target of myb1-like 2 (chicken)##BC051650|TOM1L2|146691|target of myb1-like 2 (chicken)##AK294846|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001033551|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001082968|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001130090|LRRC48|83450|leucine rich repeat containing 48##NM_001130091|LRRC48|83450|leucine rich repeat containing 48##NM_001130092|LRRC48|83450|leucine rich repeat containing 48##NM_031294|LRRC48|83450|leucine rich repeat containing 48##BC047873|LRRC48|83450|leucine rich repeat containing 48##AL136926|LRRC48|83450|leucine rich repeat containing 48##AK293011|LRRC48|83450|leucine rich repeat containing 48##BC040276|LRRC48|83450|leucine rich repeat containing 48##BC050419|LRRC48|83450|leucine rich repeat containing 48##BC050665|LRRC48|83450|leucine rich repeat containing 48##AK093317|LRRC48|83450|leucine rich repeat containing 48##AM393241|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF070584|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC032126|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF052185|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AY203943|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC004114|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_145691|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK290257|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK294487|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2	0.012764	
chr6	1437320	1437438	reg1001265.p2	4.386	+	NM_001452 U13220 AB463646	-47254	+	BC053850 NM_033260	-124705	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-744289	-	BC134421 NM_001453	173301	+	TSC_hg19_v1_chr6_+_1611545 BC169307	174195	+	AF040260 NM_001253846	738845	-	NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##BC169307|FOXC1|2296|forkhead box C1##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase	0.0	
chr7	157095104	157095285	reg1028353.p1	4.386	+	TSC_hg19_v1_chr7_+_157023934 AK098447	-71188	+	D13635 TSC_hg19_v1_chr7_+_156931668 BC014029	-163511	+	TSC_hg19_v1_chr7_+_156931631 NM_014671	-163548	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	34517	+	TSC_hg19_v1_chr7_+_157647233 BC034557	552080	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	1285259	-	D13635|UBE3C|9690|ubiquitin protein ligase E3C##BC014029|UBE3C|9690|ubiquitin protein ligase E3C##NM_014671|UBE3C|9690|ubiquitin protein ligase E3C##AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC034557|LOC100506585|100506585|uncharacterized LOC100506585##DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2	0.0	
chr9	126111996	126112177	reg1001593.p1	4.386	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-81198	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	-81266	-	TSC_hg19_v1_chr9_-_125941308 BC002693	-170766	-	NM_173689 AK123000 DQ426866 AY720432	6407	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	580225	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	661797	+	AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein##BC002693|STRBP|55342|spermatid perinuclear RNA binding protein##NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2	0.015541	
chr17	33288557	33288682	reg1029075.p1	4.385	+	TSC_hg19_v1_chr17_+_33288558 AK315671 NM_052857 AK055707 AB590460 BC002913 BC011584 DQ892326 DQ895528	-30	+	TSC_hg19_v1_chr17_-_33288480 AK302344 BC027591 NM_001193529 NM_001193530 NM_006584	-117	-	CU693272 AK301773 TSC_hg19_v1_chr17_-_33288425 AK225729 BC026125 AK225728 D78333	-184	-	TSC_hg19_v1_chr17_+_33307530 NM_002311 NM_013975 BC068005 AK300363 AK308407 U40671 X84740 BC009026	18969	+	TSC_hg19_v1_chr17_-_33390690 CR933651 NM_001017368	102098	-	TSC_hg19_v1_chr17_-_33416298 AK093112 AX747930 BC028424	127692	-	AK315671|ZNF830|91603|zinc finger protein 830##NM_052857|ZNF830|91603|zinc finger protein 830##AK055707|ZNF830|91603|zinc finger protein 830##BC002913|ZNF830|91603|zinc finger protein 830##BC011584|ZNF830|91603|zinc finger protein 830##DQ892326|ZNF830|91603|zinc finger protein 830##DQ895528|ZNF830|91603|zinc finger protein 830##AK302344|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC027591|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193529|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193530|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_006584|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK301773|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225729|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC026125|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##AK225728|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##D78333|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_002311|LIG3|3980|ligase III, DNA, ATP-dependent##NM_013975|LIG3|3980|ligase III, DNA, ATP-dependent##BC068005|LIG3|3980|ligase III, DNA, ATP-dependent##AK300363|LIG3|3980|ligase III, DNA, ATP-dependent##AK308407|LIG3|3980|ligase III, DNA, ATP-dependent##U40671|LIG3|3980|ligase III, DNA, ATP-dependent##X84740|LIG3|3980|ligase III, DNA, ATP-dependent##BC009026|LIG3|3980|ligase III, DNA, ATP-dependent##CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1##NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1##AK093112|RFFL|117584|ring finger and FYVE-like domain containing 1##BC028424|RFFL|117584|ring finger and FYVE-like domain containing 1	0.0	
chr17	42610710	42610890	reg1000296.p1	4.385	+	TSC_hg19_v1_chr17_-_42580958 NM_001002909	-29828	-	TSC_hg19_v1_chr17_-_42580760 BC136629 BC144323 AK025600 BC140010	-30036	-	AB528003 J02764 BC117443 BC126442 AK297155 AK315335 M34480 NM_000419	-143944	-	TSC_hg19_v1_chr17_+_42634696 NM_001466 BC052266 L37882 BC113402 BC113404 AB017364 AB590852	24026	+	TSC_hg19_v1_chr17_+_42733745 NM_001145080	122952	+	TSC_hg19_v1_chr17_-_42767190 CU690504 BC023298 AL833590 AK056357 BC047776 BX648868 NM_001099225 NM_144609	156328	-	NM_001002909|GPATCH8|23131|G patch domain containing 8##BC136629|GPATCH8|23131|G patch domain containing 8##BC144323|GPATCH8|23131|G patch domain containing 8##AK025600|GPATCH8|23131|G patch domain containing 8##BC140010|GPATCH8|23131|G patch domain containing 8##J02764|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC117443|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC126442|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK297155|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK315335|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##M34480|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##NM_000419|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##NM_001466|FZD2|2535|frizzled family receptor 2##BC052266|FZD2|2535|frizzled family receptor 2##L37882|FZD2|2535|frizzled family receptor 2##BC113402|FZD2|2535|frizzled family receptor 2##BC113404|FZD2|2535|frizzled family receptor 2##AB017364|FZD2|2535|frizzled family receptor 2##NM_001145080|C17orf104|284071|chromosome 17 open reading frame 104##BC023298|CCDC43|124808|coiled-coil domain containing 43##AL833590|CCDC43|124808|coiled-coil domain containing 43##AK056357|CCDC43|124808|coiled-coil domain containing 43##BC047776|CCDC43|124808|coiled-coil domain containing 43##BX648868|CCDC43|124808|coiled-coil domain containing 43##NM_001099225|CCDC43|124808|coiled-coil domain containing 43##NM_144609|CCDC43|124808|coiled-coil domain containing 43	0.016905	
chr19	40864682	40864824	reg1028416.p1	4.385	+	TSC_hg19_v1_chr19_+_40854603 BC036327 AK293690 BC096820	-10163	+	TSC_hg19_v1_chr19_-_40854423 EU831761 EU831839 AK094207 CR936760	-10321	-	NM_001031696 NM_012268	-10422	+	BC000553 TSC_hg19_v1_chr19_+_40872852	8030	+	AK302301 AK301713 AK292228 BC034501 NM_144685 AK057380	31334	-	AF321191 AF321192 NM_020956 NM_181882 BC067266	54518	-	BC036327|PLD3|23646|phospholipase D family, member 3##AK293690|PLD3|23646|phospholipase D family, member 3##BC096820|PLD3|23646|phospholipase D family, member 3##EU831761|C19orf47|126526|chromosome 19 open reading frame 47##EU831839|C19orf47|126526|chromosome 19 open reading frame 47##AK094207|C19orf47|126526|chromosome 19 open reading frame 47##CR936760|C19orf47|126526|chromosome 19 open reading frame 47##NM_001031696|PLD3|23646|phospholipase D family, member 3##NM_012268|PLD3|23646|phospholipase D family, member 3##BC000553|PLD3|23646|phospholipase D family, member 3##AK302301|HIPK4|147746|homeodomain interacting protein kinase 4##AK301713|HIPK4|147746|homeodomain interacting protein kinase 4##AK292228|HIPK4|147746|homeodomain interacting protein kinase 4##BC034501|HIPK4|147746|homeodomain interacting protein kinase 4##NM_144685|HIPK4|147746|homeodomain interacting protein kinase 4##AK057380|HIPK4|147746|homeodomain interacting protein kinase 4##AF321191|PRX|57716|periaxin##AF321192|PRX|57716|periaxin##NM_020956|PRX|57716|periaxin##NM_181882|PRX|57716|periaxin##BC067266|PRX|57716|periaxin	0.028157	
chr2	110727572	110727694	reg1029743.p1	4.385	+	BC094740 NM_001205288 NM_033514	-71625	+	NM_005054 U64675	-175668	+	AL136868 NM_001037866 NM_001123363 NM_032260	-177299	+	U17077 AB590150 DQ892870 DQ896118 TSC_hg19_v1_chr2_-_110873397 BC003179	145772	-	TSC_hg19_v1_chr2_-_110873536 AK311353	145932	-	TSC_hg19_v1_chr2_-_110873641 AK056616	146011	-	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U17077|MALL|7851|mal, T-cell differentiation protein-like##DQ892870|MALL|7851|mal, T-cell differentiation protein-like##DQ896118|MALL|7851|mal, T-cell differentiation protein-like##BC003179|MALL|7851|mal, T-cell differentiation protein-like##AK311353|MALL|7851|mal, T-cell differentiation protein-like##AK056616|MALL|7851|mal, T-cell differentiation protein-like	0.949085	CTCF.p2:-9:0.949
chr8	6929976	6930080	reg1027488.p1	4.385	+	BC107079 BC069690 NM_021010	-15774	-	BC093791 BC112188 BC069423 M21130 M23281 BC119706 X52053 BC027917 M26602 NM_005217 X13621 NM_001042500 NM_004084	-54229	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	-73328	-	NM_001164452 NM_001164456	184397	+	NM_001164452 NM_001164456	207263	+	NM_001164455	214885	+	BC107079|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC069690|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##NM_021010|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M23281|DEFA3|1668|defensin, alpha 3, neutrophil-specific##BC119706|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X52053|DEFA1|1667|defensin, alpha 1##BC027917|DEFA3|1668|defensin, alpha 3, neutrophil-specific##M26602|DEFA1|1667|defensin, alpha 1##NM_005217|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X13621|DEFA3|1668|defensin, alpha 3, neutrophil-specific##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164455|FAM90A5|441315|family with sequence similarity 90, member A5	1.115574	CTCF.p2:19:0.375	CTCF.p2:-83:0.740
chr10	38383032	38383212	reg1029940.p1	4.384	+	TSC_hg19_v1_chr10_+_38299631 NM_006954 NM_006974 AK303445 AK292844 BC017760 AK027057 D31763	-83527	+	AJ491696 NM_145011 TSC_hg19_v1_chr10_-_38265576 AK122958 BC036038 AK056452 AX721125	-117595	-	BC146820 TSC_hg19_v1_chr10_-_38147013 AK299357	-236123	-	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	161	+	AK295332 AY829267 AF165514 AF165517 BC071987 TSC_hg19_v1_chr10_+_38645320 AK293968 AK307174 CU687208	262215	+	TSC_hg19_v1_chr10_-_38691741 BC171738 BC042387 BC048143	308634	-	NM_006954|ZNF33A|7581|zinc finger protein 33A##NM_006974|ZNF33A|7581|zinc finger protein 33A##AK303445|ZNF33A|7581|zinc finger protein 33A##AK292844|ZNF33A|7581|zinc finger protein 33A##BC017760|ZNF33A|7581|zinc finger protein 33A##AK027057|ZNF33A|7581|zinc finger protein 33A##D31763|ZNF33A|7581|zinc finger protein 33A##AJ491696|ZNF25|219749|zinc finger protein 25##NM_145011|ZNF25|219749|zinc finger protein 25##AK122958|ZNF25|219749|zinc finger protein 25##BC036038|ZNF25|219749|zinc finger protein 25##AK056452|ZNF25|219749|zinc finger protein 25##BC146820|ZNF248|57209|zinc finger protein 248##AK299357|ZNF248|57209|zinc finger protein 248##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A##AK295332|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AY829267|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165514|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165517|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC071987|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK293968|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK307174|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC171738|SEPT7L|285961|septin 7-like##BC042387|SEPT7L|285961|septin 7-like##BC048143|SEPT7L|285961|septin 7-like	0.0	
chr10	89102926	89103034	reg1033943.p2	4.384	+	TSC_hg19_v1_chr10_+_89102478 BC082979	-382	+	TSC_hg19_v1_chr10_-_89102214 BC047063	-722	-	TSC_hg19_v1_chr10_-_89102128 AK309777 AK311174	-839	-	BC092519 NM_001009610	14470	+	NM_001178117 NM_004897 TSC_hg19_v1_chr10_+_89264649 AK304624 AK312937 AL050356 AF084943 AB209819 AF084944 AY358938 BC032504 AF046914 CU689404	161495	+	AK309176 NM_001178118	164609	+	BC082979|LOC677759|677759|uncharacterized LOC677759##BC047063|LOC728190|728190|uncharacterized LOC728190##AK309777|LOC728190|728190|uncharacterized LOC728190##AK311174|LOC728190|728190|uncharacterized LOC728190##BC092519|FAM22A|728118|family with sequence similarity 22, member A##NM_001009610|FAM22D|728130|family with sequence similarity 22, member D##NM_001178117|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_004897|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK304624|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK312937|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AL050356|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF084943|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AB209819|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF084944|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AY358938|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##BC032504|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AF046914|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##AK309176|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178118|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1	0.0	
chr14	66406907	66407009	reg1035084.p1	4.384	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-527233	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-527470	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-527632	-	AB037806 AF272663 NM_001024218 NM_020806	567166	+	TSC_hg19_v1_chr14_+_66974859 AK025169	567895	+	TSC_hg19_v1_chr14_+_66974870 AK315569	567911	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.125246	
chr15	65504555	65504647	reg1033367.p2	4.384	+	BC035776 AF035408 AY358904 AK225652 AK225926 AK313352 TSC_hg19_v1_chr15_-_65503811 NM_003613	-789	-	TSC_hg19_v1_chr15_-_65477676 AL136922 AK308133 AK292316 AK310614	-26915	-	TSC_hg19_v1_chr15_-_65477471 BC130373 BC136487 BC144166 AJ006267 NM_006660	-27100	-	BC006389 NM_017851 TSC_hg19_v1_chr15_-_65579223 AK000516	74559	-	BC042054 TSC_hg19_v1_chr15_-_65670341 BC067107 NM_004884	165750	-	TSC_hg19_v1_chr15_-_65715258 AB529157	210644	-	BC035776|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AF035408|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AY358904|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225652|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225926|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK313352|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##NM_003613|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AL136922|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK308133|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK292316|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK310614|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC130373|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC136487|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC144166|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AJ006267|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##NM_006660|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC006389|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##NM_017851|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##AK000516|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3	0.0	
chr18	28551450	28551588	reg1033117.p1	4.384	+	TSC_hg19_v1_chr18_-_25757363 NM_001792	-2794122	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	-2794482	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-3786286	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	71183	-	CR749226 TSC_hg19_v1_chr18_-_28681542	129969	-	TSC_hg19_v1_chr18_-_28682275 EF017811 EF017812 X56807 AK297029 AK290313 BX648425 BC063291 NM_004949 NM_024422	130672	-	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3##CR749226|DSC2|1824|desmocollin 2##EF017811|DSC2|1824|desmocollin 2##EF017812|DSC2|1824|desmocollin 2##X56807|DSC2|1824|desmocollin 2##AK297029|DSC2|1824|desmocollin 2##AK290313|DSC2|1824|desmocollin 2##BX648425|DSC2|1824|desmocollin 2##BC063291|DSC2|1824|desmocollin 2##NM_004949|DSC2|1824|desmocollin 2##NM_024422|DSC2|1824|desmocollin 2	0.999486	CTCF.p2:6:0.999
chr20	41820708	41820836	reg1030133.p1	4.384	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	-2262	-	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-1573711	-	AB089149 NM_052846	-1825275	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	265720	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	265831	+	TSC_hg19_v1_chr20_+_42136336 NM_032107 AK299199	315572	+	AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6##NM_032107|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK299199|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)	0.965932	CTCF.p2:19:0.966
chr2	226530180	226530289	reg1028982.p1	4.384	+	NM_020864 BC131727 AB040919	-264589	+	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	-622886	-	TSC_hg19_v1_chr2_-_225811768 EU236710	-718480	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	1133245	-	TSC_hg19_v1_chr2_-_227664534 S62539	1134265	-	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	1170496	+	NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##EU236710|DOCK10|55619|dedicator of cytokinesis 10##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##S62539|IRS1|3667|insulin receptor substrate 1##NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1	0.996477	CTCF.p2:25:0.996
chr6	8905117	8905256	reg1033586.p2	4.384	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-469298	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-469478	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-802396	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	1507430	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	1510089	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	1510282	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.093879	
chr14	93156809	93156937	reg1029902.p1	4.383	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	-38050	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	-38237	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-176914	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	58086	-	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	103813	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	232571	+	AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)	0.978359	CTCF.p2:14:0.978
chr15	93206553	93206733	reg1034782.p2	4.383	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	-7764	-	AK057393 NM_153040	-191737	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	-269444	+	BC110328 TSC_hg19_v1_chr15_-_93277463	70746	-	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	236843	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	236937	+	BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC110328|FAM174B|400451|family with sequence similarity 174, member B##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2	0.0	
chr16	86551321	86551427	reg1012756.p1	4.383	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	-7134	+	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	-7218	+	TSC_hg19_v1_chr16_-_86542463 AK091834	-8910	-	TSC_hg19_v1_chr16_-_86588803 AK023955 BC112057 BC112059 BC143702 BC143703 BC143704 BC143705 BC143707 NM_001159380 AK023060 AK096836 AK297726 NM_001159377 NM_001159378 NM_001159379 NM_022764	37398	-	BC113437 BC113439 NM_005251	49482	+	BC100027 NM_005250	60740	+	EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK023955|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112057|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC112059|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143702|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143703|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143704|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143705|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC143707|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159380|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK023060|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK096836|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##AK297726|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159377|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159378|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_001159379|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##NM_022764|MTHFSD|64779|methenyltetrahydrofolate synthetase domain containing##BC113437|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC113439|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##NM_005251|FOXC2|2303|forkhead box C2 (MFH-1, mesenchyme forkhead 1)##BC100027|FOXL1|2300|forkhead box L1##NM_005250|FOXL1|2300|forkhead box L1	0.657506	
chr17	29044122	29044287	reg1032515.p1	4.383	+	BC096718 BC098126 BC098273 NM_015594	-157621	+	TSC_hg19_v1_chr17_+_28804434 AK000606 AK291381 NM_001007024 NM_001007025 NM_004871 AK298714 AF047438 BC012620 AF073926 BC040471	-239771	+	AK316409 NM_001199775 AK302878	-336689	+	TSC_hg19_v1_chr17_+_29058664 BC047718	14484	+	TSC_hg19_v1_chr17_-_29151711 DQ298450 DQ892276 CU692798 AK296238 AF046059 BC023567	107471	-	TSC_hg19_v1_chr17_-_29151725 AK313315 NM_015986	107559	-	BC096718|TBC1D29|26083|TBC1 domain family, member 29##BC098126|TBC1D29|26083|TBC1 domain family, member 29##BC098273|TBC1D29|26083|TBC1 domain family, member 29##NM_015594|TBC1D29|26083|TBC1 domain family, member 29##AK000606|GOSR1|9527|golgi SNAP receptor complex member 1##AK291381|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1##NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1##AK298714|GOSR1|9527|golgi SNAP receptor complex member 1##AF047438|GOSR1|9527|golgi SNAP receptor complex member 1##BC012620|GOSR1|9527|golgi SNAP receptor complex member 1##AF073926|GOSR1|9527|golgi SNAP receptor complex member 1##BC040471|GOSR1|9527|golgi SNAP receptor complex member 1##AK316409|CPD|1362|carboxypeptidase D##NM_001199775|CPD|1362|carboxypeptidase D##AK302878|CPD|1362|carboxypeptidase D##BC047718|SUZ12P|440423|suppressor of zeste 12 homolog pseudogene##DQ298450|CRLF3|51379|cytokine receptor-like factor 3##DQ892276|CRLF3|51379|cytokine receptor-like factor 3##AK296238|CRLF3|51379|cytokine receptor-like factor 3##AF046059|CRLF3|51379|cytokine receptor-like factor 3##BC023567|CRLF3|51379|cytokine receptor-like factor 3##AK313315|CRLF3|51379|cytokine receptor-like factor 3##NM_015986|CRLF3|51379|cytokine receptor-like factor 3	0.0	
chr20	38894922	38895037	reg1034518.p1	4.383	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-1303990	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-1339911	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-1339990	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	422898	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	762515	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	762685	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.951719	CTCF.p2:-14:0.952
chr4	153618248	153618377	reg1028918.p2	4.383	+	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	-17112	-	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	-160879	+	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	-162018	-	BC037869 NM_145720	82591	-	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	82709	+	TSC_hg19_v1_chr4_+_153701117 AK290472 U52521 BC103759 BC105114 BC105116 BC143675 BC143676 AK096509	82815	+	BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154##AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##BC037869|TIGD4|201798|tigger transposable element derived 4##NM_145720|TIGD4|201798|tigger transposable element derived 4##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK290472|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##U52521|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC103759|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105114|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105116|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143675|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143676|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK096509|ARFIP1|27236|ADP-ribosylation factor interacting protein 1	0.0	
chr8	12546524	12546607	reg1026184.p1	4.383	+	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-252661	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-252722	-	DQ012022 NM_001037804 NM_001195257	-370741	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	66439	-	AK296010 NM_020844	256601	+	AB040889 NM_001099677	323207	+	BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456	0.0	CTCF.p2:108:0.740
chr1	207672811	207672932	reg1007034.p1	4.382	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	-3293	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-45210	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-177766	+	NM_175710 BC109190 BC109191	145616	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	252522	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	252612	+	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein	0.0	
chr14	65968219	65968337	reg1031787.p1	4.382	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-88553	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-88790	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-88952	-	AB037806 AF272663 NM_001024218 NM_020806	1005846	+	TSC_hg19_v1_chr14_+_66974859 AK025169	1006575	+	TSC_hg19_v1_chr14_+_66974870 AK315569	1006591	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.010696	
chrX	77395236	77395416	reg1028186.p2	4.382	+	AB529179 DQ891928 DQ895115 BC071649 TSC_hg19_v1_chrX_-_77395133 AF220509 BC009566 AK312579 BC010350 BC146952 BC146960 NM_015975	-183	-	AB062432 TSC_hg19_v1_chrX_+_77359778 BC104837 BC113568 BC023234 AY423725 AB385546 CR456716 HQ258236	-35524	+	TSC_hg19_v1_chrX_+_77359756 V00572	-35570	+	BC035750 DQ131801 DQ131800 AK023929 DQ131802 NM_006639 AK313643 DQ131799	187757	-	AK096184 NM_152694	519498	-	NM_005296 AK314134	607882	+	DQ891928|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##DQ895115|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC071649|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AF220509|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC009566|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AK312579|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC010350|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146952|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146960|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##NM_015975|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AB062432|PGK1|5230|phosphoglycerate kinase 1##BC104837|PGK1|5230|phosphoglycerate kinase 1##BC113568|PGK1|5230|phosphoglycerate kinase 1##BC023234|PGK1|5230|phosphoglycerate kinase 1##AY423725|PGK1|5230|phosphoglycerate kinase 1##CR456716|PGK1|5230|phosphoglycerate kinase 1##HQ258236|PGK1|5230|phosphoglycerate kinase 1##V00572|PGK1|5230|phosphoglycerate kinase 1##BC035750|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131801|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131800|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK023929|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131802|CYSLTR1|10800|cysteinyl leukotriene receptor 1##NM_006639|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK313643|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131799|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK096184|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_152694|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4	0.154717	
chr10	74135479	74135577	reg1030206.p1	4.381	+	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	-20602	-	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	-20850	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-101704	+	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	148191	-	TSC_hg19_v1_chr10_-_74385838 BC016641 AK225695 AL117423 AK225298 AK023318	250306	-	TSC_hg19_v1_chr10_-_74385854 BC004190 BC004216	250341	-	NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1##BC016641|MICU1|10367|mitochondrial calcium uptake 1##AK225695|MICU1|10367|mitochondrial calcium uptake 1##AL117423|MICU1|10367|mitochondrial calcium uptake 1##AK225298|MICU1|10367|mitochondrial calcium uptake 1##AK023318|MICU1|10367|mitochondrial calcium uptake 1##BC004190|MICU1|10367|mitochondrial calcium uptake 1##BC004216|MICU1|10367|mitochondrial calcium uptake 1	0.0251	
chr11	65355846	65356026	reg1016882.p1	4.381	+	TSC_hg19_v1_chr11_+_65343506 NM_001099409	-12433	+	BC032373 NM_001098784 NM_001098785 NM_152832 AF052151 TSC_hg19_v1_chr11_+_65340004	-16005	+	TSC_hg19_v1_chr11_+_65337947 AB001740 NM_006396 BC014791 DQ891782 DQ894966	-17994	+	AF110522 AF110523 AF110524 NM_005714 NM_033347 NM_033348 NM_033455	7530	-	TSC_hg19_v1_chr11_-_65381690 U07747 BC064543 AK315557 AB209655 BC011263 L32976 AK222781 NM_002419	25757	-	TSC_hg19_v1_chr11_-_65381782 AK310986	25872	-	NM_001099409|EHBP1L1|254102|EH domain binding protein 1-like 1##BC032373|FAM89B|23625|family with sequence similarity 89, member B##NM_001098784|FAM89B|23625|family with sequence similarity 89, member B##NM_001098785|FAM89B|23625|family with sequence similarity 89, member B##NM_152832|FAM89B|23625|family with sequence similarity 89, member B##AF052151|FAM89B|23625|family with sequence similarity 89, member B##AB001740|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##NM_006396|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##BC014791|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##DQ891782|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##DQ894966|SSSCA1|10534|Sjogren syndrome/scleroderma autoantigen 1##AF110522|KCNK7|10089|potassium channel, subfamily K, member 7##AF110523|KCNK7|10089|potassium channel, subfamily K, member 7##AF110524|KCNK7|10089|potassium channel, subfamily K, member 7##NM_005714|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033347|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033348|KCNK7|10089|potassium channel, subfamily K, member 7##NM_033455|KCNK7|10089|potassium channel, subfamily K, member 7##U07747|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##BC064543|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##AK315557|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##AB209655|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##BC011263|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##L32976|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##AK222781|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11##NM_002419|MAP3K11|4296|mitogen-activated protein kinase kinase kinase 11	0.0	
chr16	8985315	8985451	reg1015753.p1	4.381	+	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	-22523	-	NM_001042476 BC001333	-23131	-	NM_000303 TSC_hg19_v1_chr16_+_8891675 AK296123 U85773 AK300785 AK291537 AK299979 AK311035 AK312532 AK304320 AK296630 BC008310	-93685	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	71912	-	TSC_hg19_v1_chr16_+_9185545 NM_014117	200157	+	TSC_hg19_v1_chr16_+_9185577 BC113570	200220	+	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_000303|PMM2|5373|phosphomannomutase 2##U85773|PMM2|5373|phosphomannomutase 2##AK300785|PMM2|5373|phosphomannomutase 2##AK291537|PMM2|5373|phosphomannomutase 2##AK299979|PMM2|5373|phosphomannomutase 2##AK311035|PMM2|5373|phosphomannomutase 2##AK312532|PMM2|5373|phosphomannomutase 2##AK304320|PMM2|5373|phosphomannomutase 2##AK296630|PMM2|5373|phosphomannomutase 2##BC008310|PMM2|5373|phosphomannomutase 2##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##BC113570|C16orf72|29035|chromosome 16 open reading frame 72	0.0	
chr19	861970	862064	reg1033884.p1	4.381	+	BC034529 BC040146 TSC_hg19_v1_chr19_+_860648 CR536575	-1376	+	TSC_hg19_v1_chr19_+_859675 AB590861 AJ313463 DQ884409 M84526 BC051001	-2322	+	TSC_hg19_v1_chr19_+_859663 BC057807 AK300963 NM_001928	-2356	+	TSC_hg19_v1_chr19_-_893188 BC004554 BC011841 BC017282 AF106934	31182	-	TSC_hg19_v1_chr19_-_893218 NM_005481	31200	-	TSC_hg19_v1_chr19_-_913199 BC012775	51180	-	BC034529|CFD|1675|complement factor D (adipsin)##BC040146|CFD|1675|complement factor D (adipsin)##CR536575|CFD|1675|complement factor D (adipsin)##AJ313463|CFD|1675|complement factor D (adipsin)##DQ884409|CFD|1675|complement factor D (adipsin)##M84526|CFD|1675|complement factor D (adipsin)##BC051001|CFD|1675|complement factor D (adipsin)##BC057807|CFD|1675|complement factor D (adipsin)##AK300963|CFD|1675|complement factor D (adipsin)##NM_001928|CFD|1675|complement factor D (adipsin)##BC004554|MED16|10025|mediator complex subunit 16##BC011841|MED16|10025|mediator complex subunit 16##BC017282|MED16|10025|mediator complex subunit 16##AF106934|MED16|10025|mediator complex subunit 16##NM_005481|MED16|10025|mediator complex subunit 16##BC012775|R3HDM4|91300|R3H domain containing 4	0.57986	CTCF.p2:-2:0.580
chr22	42665681	42665805	reg1030731.p2	4.381	+	AB527391 NM_005650 NM_181492	-54366	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	-138862	-	AB463001 CU013213 CU013501 M20403 X08006 BC066877 BC067432 TSC_hg19_v1_chr22_-_42526809 BC106757 BC106758 BC126858 CR456430 BC075023 BC075024	-138936	-	BC038245 TSC_hg19_v1_chr22_-_42765218	99459	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	162638	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	250024	-	NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013213|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013501|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##M20403|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##X08006|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC066877|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC067432|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106757|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106758|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC126858|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CR456430|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075023|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075024|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)	0.351366	CTCF.p2:21:0.351
chr4	1213092	1213272	reg1028606.p1	4.381	+	CR627052 NM_001199021	-10433	-	BC104228 BC104229 BC112991 BC112992 BC044945 AK091779 AX747178 TSC_hg19_v1_chr4_-_1195337	-17940	-	TSC_hg19_v1_chr4_-_1166969 NM_001128325	-46204	-	AB527760 DQ891918 DQ895102 TSC_hg19_v1_chr4_-_1242878 AF091555 BC011655 U37408	29628	-	TSC_hg19_v1_chr4_-_1242910 BC072021 BC053320 NM_001012614 NM_001328 BC098400	29726	-	TSC_hg19_v1_chr4_+_1243060 AK125775 AK056133	29986	+	CR627052|LOC100130872|100130872|uncharacterized LOC100130872##NM_001199021|SPON2|10417|spondin 2, extracellular matrix protein##BC104228|LOC100130872|100130872|uncharacterized LOC100130872##BC104229|LOC100130872|100130872|uncharacterized LOC100130872##BC112991|LOC100130872|100130872|uncharacterized LOC100130872##BC112992|LOC100130872|100130872|uncharacterized LOC100130872##BC044945|LOC100130872|100130872|uncharacterized LOC100130872##AK091779|LOC100130872|100130872|uncharacterized LOC100130872##NM_001128325|SPON2|10417|spondin 2, extracellular matrix protein##DQ891918|CTBP1|1487|C-terminal binding protein 1##DQ895102|CTBP1|1487|C-terminal binding protein 1##AF091555|CTBP1|1487|C-terminal binding protein 1##BC011655|CTBP1|1487|C-terminal binding protein 1##U37408|CTBP1|1487|C-terminal binding protein 1##BC072021|CTBP1|1487|C-terminal binding protein 1##BC053320|CTBP1|1487|C-terminal binding protein 1##NM_001012614|CTBP1|1487|C-terminal binding protein 1##NM_001328|CTBP1|1487|C-terminal binding protein 1##BC098400|CTBP1|1487|C-terminal binding protein 1##AK125775|C4orf42|92070|chromosome 4 open reading frame 42##AK056133|C4orf42|92070|chromosome 4 open reading frame 42	0.0	
chr6	157041068	157041191	reg1023282.p1	4.381	+	AF190122 NM_015718	-1264093	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1405506	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1405544	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	57934	+	TSC_hg19_v1_chr6_+_157099206 AB587572	58096	+	TSC_hg19_v1_chr6_+_157099283 AF521671	58155	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.0	
chr10	108442050	108442177	reg1030103.p1	4.380	+	BC117417 TSC_hg19_v1_chr10_+_106401047	-2041068	+	AB028982 NM_014978	-2041255	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-2328572	+	TSC_hg19_v1_chr10_-_108459000 AK123752	16946	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	482263	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	3241096	-	BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.639428	CTCF.p2:21:0.639
chr11	72853037	72853135	reg1017818.p1	4.380	+	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	-37	-	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-327604	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-327681	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	76258	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	76360	+	AK313942 TSC_hg19_v1_chr11_+_72929608	76530	+	AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.016641	
chr14	106032662	106032843	reg1030093.p1	4.380	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-39811	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-75116	+	BX248038 NM_001134877	-76233	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	59584	-	BC040042 TSC_hg19_v1_chr14_-_106110945	78171	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	78364	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.0	
chr15	89601076	89601256	reg1000760.p2	4.380	+	BC003610 AK095908 AK222735 AK223182 AK304627 AK310357 AK312640 U58516 AY141974 TSC_hg19_v1_chr15_-_89456611 NM_001114614 NM_005928	-144527	-	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	-144606	-	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	-162368	-	NM_007011 NM_152924	30214	+	TSC_hg19_v1_chr15_+_89631652 BC090052 AF546700 BC019248	30482	+	TSC_hg19_v1_chr15_+_89631708 AL110291 AK222841 AK290340 AK223083 AK296827	30537	+	BC003610|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK095908|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK222735|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK223182|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK304627|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK310357|MFGE8|4240|milk fat globule-EGF factor 8 protein##AK312640|MFGE8|4240|milk fat globule-EGF factor 8 protein##U58516|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY141974|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_001114614|MFGE8|4240|milk fat globule-EGF factor 8 protein##NM_005928|MFGE8|4240|milk fat globule-EGF factor 8 protein##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_007011|ABHD2|11057|abhydrolase domain containing 2##NM_152924|ABHD2|11057|abhydrolase domain containing 2##BC090052|ABHD2|11057|abhydrolase domain containing 2##AF546700|ABHD2|11057|abhydrolase domain containing 2##BC019248|ABHD2|11057|abhydrolase domain containing 2##AL110291|ABHD2|11057|abhydrolase domain containing 2##AK222841|ABHD2|11057|abhydrolase domain containing 2##AK290340|ABHD2|11057|abhydrolase domain containing 2##AK223083|ABHD2|11057|abhydrolase domain containing 2##AK296827|ABHD2|11057|abhydrolase domain containing 2	0.0	
chr21	35445515	35445610	reg1030866.p2	4.380	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-157470	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-254892	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-430707	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	279	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	367	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	290784	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.0	
chr2	182275906	182276002	reg1032293.p1	4.380	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-430127	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-430311	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-430584	+	NM_000885	45664	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	46096	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	46368	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.0	
chr3	39189795	39189976	reg1022961.p2	4.380	+	NM_001105513 NM_145755 AJ487015 BC062621 BC129948 AK022483 BC039691 AK302408 AK302465 CU687576	-40646	+	TSC_hg19_v1_chr3_-_39149122 BC075854 AK001574 AK057043 AJ409349 NM_031899 AK303847	-40759	-	CU687304 AB527597 TSC_hg19_v1_chr3_-_39149103 BC064624 AK300271 BC103826 BC103827 BC008928	-40814	-	TSC_hg19_v1_chr3_-_39195053 BC038949 AB053121 BC028213	5166	-	NM_033027 TSC_hg19_v1_chr3_-_39195146	5239	-	BC127119 BC139782 AY375160 NM_194293 TSC_hg19_v1_chr3_-_39234085 AJ626899 AJ626900 NM_001198621 AK096421 BX648565 CR749430	44200	-	NM_001105513|TTC21A|199223|tetratricopeptide repeat domain 21A##NM_145755|TTC21A|199223|tetratricopeptide repeat domain 21A##AJ487015|TTC21A|199223|tetratricopeptide repeat domain 21A##BC062621|TTC21A|199223|tetratricopeptide repeat domain 21A##BC129948|TTC21A|199223|tetratricopeptide repeat domain 21A##AK022483|TTC21A|199223|tetratricopeptide repeat domain 21A##BC039691|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302408|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302465|TTC21A|199223|tetratricopeptide repeat domain 21A##BC075854|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK001574|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK057043|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AJ409349|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##NM_031899|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK303847|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC064624|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK300271|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103826|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103827|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC008928|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC038949|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##AB053121|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC028213|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##NM_033027|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC127119|XIRP1|165904|xin actin-binding repeat containing 1##BC139782|XIRP1|165904|xin actin-binding repeat containing 1##AY375160|XIRP1|165904|xin actin-binding repeat containing 1##NM_194293|XIRP1|165904|xin actin-binding repeat containing 1##AJ626899|XIRP1|165904|xin actin-binding repeat containing 1##AJ626900|XIRP1|165904|xin actin-binding repeat containing 1##NM_001198621|XIRP1|165904|xin actin-binding repeat containing 1##AK096421|XIRP1|165904|xin actin-binding repeat containing 1##BX648565|XIRP1|165904|xin actin-binding repeat containing 1##CR749430|XIRP1|165904|xin actin-binding repeat containing 1	0.047612	
chr4	119662177	119662303	reg1027286.p1	4.380	+	TSC_hg19_v1_chr4_+_119606557 AK055555 AB046847 BC006565 BC007449 NM_020961 AB384254 CU675451	-55629	+	TSC_hg19_v1_chr4_+_119512929 AK024248	-149306	+	TSC_hg19_v1_chr4_-_119273910 AJ001531 BC007761 NM_003619	-388315	-	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	94987	-	TSC_hg19_v1_chr4_-_119757290 NM_014822	95101	-	TSC_hg19_v1_chr4_+_119810008 AL833547 NM_001128933 NM_001128934 NM_133477 BC150629 AK307711 CR936673 AK304121 AL832031 AL833294 AL832363 BC136256 AM392848 AM393854 EU481975	147844	+	AK055555|METTL14|57721|methyltransferase like 14##AB046847|METTL14|57721|methyltransferase like 14##BC006565|METTL14|57721|methyltransferase like 14##BC007449|METTL14|57721|methyltransferase like 14##NM_020961|METTL14|57721|methyltransferase like 14##AK024248|LOC729218|729218|uncharacterized LOC729218##AJ001531|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC007761|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##NM_003619|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##NM_014822|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AL833547|SYNPO2|171024|synaptopodin 2##NM_001128933|SYNPO2|171024|synaptopodin 2##NM_001128934|SYNPO2|171024|synaptopodin 2##NM_133477|SYNPO2|171024|synaptopodin 2##BC150629|SYNPO2|171024|synaptopodin 2##AK307711|SYNPO2|171024|synaptopodin 2##CR936673|SYNPO2|171024|synaptopodin 2##AK304121|SYNPO2|171024|synaptopodin 2##AL832031|SYNPO2|171024|synaptopodin 2##AL833294|SYNPO2|171024|synaptopodin 2##AL832363|SYNPO2|171024|synaptopodin 2##BC136256|SYNPO2|171024|synaptopodin 2##AM392848|SYNPO2|171024|synaptopodin 2##AM393854|SYNPO2|171024|synaptopodin 2##EU481975|SYNPO2|171024|synaptopodin 2	0.99988	CTCF.p2:-14:1.000
chr11	32735177	32735297	reg1031816.p2	4.379	+	TSC_hg19_v1_chr11_+_32605376 AK131064 AK292139 AK304378 AK001768 AK300002 AF064603 BC051292 BC011937 BC019103 NM_006360 AK222564 AK307121 CU676384 AY769947 CR450300 DQ185042	-129839	+	TSC_hg19_v1_chr11_+_32605343 AK312512	-129897	+	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	-278168	-	BC146800 AK131470 NM_001008391 BC062749	80940	-	TSC_hg19_v1_chr11_+_32851476 BC010052 NM_024081 BC063393 AF326351	116313	+	TSC_hg19_v1_chr11_+_32914677 BC112935 NM_001076786	179338	+	AK131064|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK292139|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK304378|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK001768|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK300002|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AF064603|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC051292|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC011937|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC019103|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##NM_006360|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK222564|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK307121|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AY769947|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##CR450300|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##DQ185042|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK312512|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1##BC146800|CCDC73|493860|coiled-coil domain containing 73##AK131470|CCDC73|493860|coiled-coil domain containing 73##NM_001008391|CCDC73|493860|coiled-coil domain containing 73##BC062749|CCDC73|493860|coiled-coil domain containing 73##BC010052|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##NM_024081|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC063393|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##AF326351|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC112935|QSER1|79832|glutamine and serine rich 1##NM_001076786|QSER1|79832|glutamine and serine rich 1	0.719625	CTCF.p2:0:0.720
chr12	12639692	12639873	reg1029912.p1	4.379	+	TSC_hg19_v1_chr12_+_12510051 NM_058169 AK075028 BC013668 AY037865 AY037866 DQ891778 DQ894962 CU680646	-129617	+	AY358563 TSC_hg19_v1_chr12_-_12503210 AK023622 NM_018050 AK001160 BC032998	-136610	-	BC117136 BC126405 BC143725 AF074264 NM_002336 TSC_hg19_v1_chr12_-_12419947	-219940	-	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	75618	-	TSC_hg19_v1_chr12_+_12764831 BC106052 AF039081 NM_001310 AK307202	125013	+	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	125101	+	NM_058169|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AK075028|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##BC013668|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037865|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037866|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ891778|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ894962|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY358563|MANSC1|54682|MANSC domain containing 1##AK023622|MANSC1|54682|MANSC domain containing 1##NM_018050|MANSC1|54682|MANSC domain containing 1##AK001160|MANSC1|54682|MANSC domain containing 1##BC032998|MANSC1|54682|MANSC domain containing 1##BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6##BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6##BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6##AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6##NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6##AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16##BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2##AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2##AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2##BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2	0.0	
chr12	13177227	13177340	reg1029905.p1	4.379	+	U86813 TSC_hg19_v1_chr12_+_13154505	-22811	+	TSC_hg19_v1_chr12_+_13153363 AK125676 AK125093	-23878	+	TSC_hg19_v1_chr12_-_13153227 AK289877 NM_015987	-24047	-	TSC_hg19_v1_chr12_+_13197145 BC132772 BC132774	19898	+	TSC_hg19_v1_chr12_+_13197325 AK125278 NM_020853 BC039267 CR936647 HQ258331 HQ258475	20045	+	AK075311 AY358513 BC112896 AK075288 AK075322 AB593019 AB593020 BC001796 AK027894 NM_001206843 NM_001206845 NM_031289 NM_153823	71377	-	U86813|HTR7P1|93164|5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1##AK125093|HTR7P1|93164|5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1##AK289877|HEBP1|50865|heme binding protein 1##NM_015987|HEBP1|50865|heme binding protein 1##BC132772|KIAA1467|57613|KIAA1467##BC132774|KIAA1467|57613|KIAA1467##AK125278|KIAA1467|57613|KIAA1467##NM_020853|KIAA1467|57613|KIAA1467##BC039267|KIAA1467|57613|KIAA1467##CR936647|KIAA1467|57613|KIAA1467##AK075311|GSG1|83445|germ cell associated 1##AY358513|GSG1|83445|germ cell associated 1##BC112896|GSG1|83445|germ cell associated 1##AK075288|GSG1|83445|germ cell associated 1##AK075322|GSG1|83445|germ cell associated 1##AB593019|GSG1|83445|germ cell associated 1##AB593020|GSG1|83445|germ cell associated 1##BC001796|GSG1|83445|germ cell associated 1##AK027894|GSG1|83445|germ cell associated 1##NM_001206843|GSG1|83445|germ cell associated 1##NM_001206845|GSG1|83445|germ cell associated 1##NM_031289|GSG1|83445|germ cell associated 1##NM_153823|GSG1|83445|germ cell associated 1	0.0	
chr13	112112967	112113127	reg1033689.p1	4.379	+	BC029889 NM_152324	-140033	+	AK300272 TSC_hg19_v1_chr13_+_111855425	-257625	+	NM_001113513 BC050521	-273861	+	NM_005986	608865	+	AK130866 NM_145248 BC016750	917612	+	AJ003061 AJ003062 BT009772 CU680680 DQ891072 DQ894255 AF042378 TSC_hg19_v1_chr13_-_113242450 BC013781 AK302537 BC007763	1129325	-	BC029889|C13orf16|121793|chromosome 13 open reading frame 16##NM_152324|C13orf16|121793|chromosome 13 open reading frame 16##AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113513|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC050521|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_005986|SOX1|6656|SRY (sex determining region Y)-box 1##AK130866|SPACA7|122258|sperm acrosome associated 7##NM_145248|SPACA7|122258|sperm acrosome associated 7##BC016750|SPACA7|122258|sperm acrosome associated 7##AJ003061|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AJ003062|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BT009772|TUBGCP3|10426|tubulin, gamma complex associated protein 3##DQ891072|TUBGCP3|10426|tubulin, gamma complex associated protein 3##DQ894255|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AF042378|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC013781|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK302537|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC007763|TUBGCP3|10426|tubulin, gamma complex associated protein 3	0.525879	CTCF.p2:13:0.526
chr15	101409898	101409998	reg1032191.p1	4.379	+	TSC_hg19_v1_chr15_+_101390032 AK056534	-19915	+	NM_024708 NM_198243 TSC_hg19_v1_chr15_+_101142810 AK289860 BC063581 AF451994 AK026204 AK222958 AK222974 BC025252	-267153	+	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	-267539	-	TSC_hg19_v1_chr15_+_101420006 NM_000693	10058	+	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	10123	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	49526	-	AK056534|LOC145757|145757|uncharacterized LOC145757##NM_024708|ASB7|140460|ankyrin repeat and SOCS box containing 7##NM_198243|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK289860|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC063581|ASB7|140460|ankyrin repeat and SOCS box containing 7##AF451994|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK026204|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222958|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK222974|ASB7|140460|ankyrin repeat and SOCS box containing 7##BC025252|ASB7|140460|ankyrin repeat and SOCS box containing 7##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)##NM_000693|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3	0.994407	CTCF.p2:-4:0.994
chr18	49480049	49480228	reg1030763.p1	4.379	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-756098	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-756426	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-756912	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	386403	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	386975	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2210854	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.0	
chr20	55964643	55964758	reg1026660.p1	4.379	+	NM_001190472	-29823	-	AK292247 AY349350 NM_001015885	-38099	+	TSC_hg19_v1_chr20_+_55926310 BC103754 AK309743 AK309069 U84720 BC106923 BC106924	-38378	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	1757	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	135501	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	171457	+	NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC103754|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AK309743|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AK309069|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##U84720|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC106923|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC106924|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)	0.435967	CTCF.p2:-36:0.436
chr2	135367362	135367542	reg1035410.p4	4.379	+	NM_002410 D17716 AF113921	-355567	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-1041414	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-1188098	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	109104	-	AK125008 NM_138326 BC016018 BC107420 AB071418	228766	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	308945	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.0	
chr2	179565714	179565835	reg1032894.p1	4.379	+	TSC_hg19_v1_chr2_+_179387947 AK093733	-177814	+	TSC_hg19_v1_chr2_+_179345280 AF286162 BC044567 EU832321 EU832406	-220344	+	TSC_hg19_v1_chr2_+_179345234 AK074209	-220542	+	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	93927	-	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	106329	-	AL832777 NM_173648	349011	-	AK093733|LOC100506866|100506866|uncharacterized LOC100506866##AF286162|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##BC044567|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##EU832321|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##EU832406|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##AK074209|PLEKHA3|65977|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3##X98114|TTN|7273|titin##X98115|TTN|7273|titin##X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141	0.073297	
chr3	153157695	153157810	reg1036014.p1	4.379	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-277704	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-277726	+	NM_002563 Z49205	-605017	+	AF086445 NM_001101337	44531	+	AK127282 NM_001251962	681039	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	681450	+	BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26	0.957552	CTCF.p2:9:0.958
chr3	21936096	21936232	reg1030965.p2	4.379	+	AK026072 NM_024697	-143349	-	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-1708490	-	BC070075 TSC_hg19_v1_chr3_+_20081907 BC060823 AB527402	-1854254	+	AK310298 TSC_hg19_v1_chr3_-_22414124	477970	-	TSC_hg19_v1_chr3_+_23244600 AK307075	1308419	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	1308591	+	AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC070075|KAT2B|8850|K(lysine) acetyltransferase 2B##BC060823|KAT2B|8850|K(lysine) acetyltransferase 2B##AK310298|ZNF385D|79750|zinc finger protein 385D##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2	0.720034	CTCF.p2:-6:0.720
chr4	167174067	167174198	reg1032607.p1	4.379	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-379678	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-873975	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-925277	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	981479	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	981572	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	981608	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.998795	CTCF.p2:9:0.999
chr6	30698789	30698856	reg1030222.p1	4.379	+	BC001896 TSC_hg19_v1_chr6_+_30691264 DQ457058 BC029323 BC015889	-7561	+	TSC_hg19_v1_chr6_+_30689430 AK298889 AK316316 AK302314	-9387	+	TSC_hg19_v1_chr6_+_30688150 BC002347 BC007605 AB062393 BC001938 BC005838 AF070561 AF070593 BC013374 NM_178014 BC021909 BC019924 BC062532 AK297489 DQ891742 DQ891828 DQ894920 AB463327 CU676482 V00599	-10598	+	TSC_hg19_v1_chr6_-_30710463 AF085357 AF089750 AF117234 NM_005803 AK301291 AK000816 AK222530	11626	-	AF039067 BT006703 AB591006 AF083421 Y14551 BC000844 BC005080 S81914 TSC_hg19_v1_chr6_-_30712325 AK222588 AK314162 NM_003897	13489	-	AK291621 TSC_hg19_v1_chr6_+_30850729	151891	+	BC001896|TUBB|203068|tubulin, beta class I##DQ457058|TUBB|203068|tubulin, beta class I##BC029323|TUBB|203068|tubulin, beta class I##BC015889|TUBB|203068|tubulin, beta class I##AK298889|TUBB|203068|tubulin, beta class I##AK316316|TUBB|203068|tubulin, beta class I##AK302314|TUBB|203068|tubulin, beta class I##BC002347|TUBB|203068|tubulin, beta class I##BC007605|TUBB|203068|tubulin, beta class I##AB062393|TUBB|203068|tubulin, beta class I##BC001938|TUBB|203068|tubulin, beta class I##BC005838|TUBB|203068|tubulin, beta class I##AF070561|TUBB|203068|tubulin, beta class I##AF070593|TUBB|203068|tubulin, beta class I##BC013374|TUBB|203068|tubulin, beta class I##NM_178014|TUBB|203068|tubulin, beta class I##BC021909|TUBB|203068|tubulin, beta class I##BC019924|TUBB|203068|tubulin, beta class I##BC062532|TUBB|203068|tubulin, beta class I##AK297489|TUBB|203068|tubulin, beta class I##DQ891742|TUBB|203068|tubulin, beta class I##DQ891828|TUBB|203068|tubulin, beta class I##DQ894920|TUBB|203068|tubulin, beta class I##V00599|TUBB|203068|tubulin, beta class I##AF085357|FLOT1|10211|flotillin 1##AF089750|FLOT1|10211|flotillin 1##AF117234|FLOT1|10211|flotillin 1##NM_005803|FLOT1|10211|flotillin 1##AK301291|FLOT1|10211|flotillin 1##AK000816|FLOT1|10211|flotillin 1##AK222530|FLOT1|10211|flotillin 1##AF039067|IER3|8870|immediate early response 3##BT006703|IER3|8870|immediate early response 3##AF083421|IER3|8870|immediate early response 3##Y14551|IER3|8870|immediate early response 3##BC000844|IER3|8870|immediate early response 3##BC005080|IER3|8870|immediate early response 3##S81914|IER3|8870|immediate early response 3##AK222588|IER3|8870|immediate early response 3##AK314162|IER3|8870|immediate early response 3##NM_003897|IER3|8870|immediate early response 3##AK291621|DDR1|780|discoidin domain receptor tyrosine kinase 1	0.996692	CTCF.p2:-12:0.997
chr9	139483354	139483465	reg1031793.p2	4.379	+	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	-43159	-	TSC_hg19_v1_chr9_-_139378220 AB593115	-105167	-	BC036221 NM_152571 AK055336	-105439	+	NM_016215 AL512735 AY358903 BC088371 AY358902	73992	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	76806	+	BC012377 TSC_hg19_v1_chr9_+_139560248	76862	+	AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7##BC012377|EGFL7|51162|EGF-like-domain, multiple 7	0.159861	
chr1	55743145	55743325	reg1004726.p1	4.378	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-62151	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-62199	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-238011	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	1301784	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	1301895	-	AK312439 TSC_hg19_v1_chr1_-_57045216	1301982	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.0	
chr1	69843337	69843513	reg1036285.p2	4.378	+	TSC_hg19_v1_chr1_-_68962766 AK225735 BC003511 AB281187 AB281274 AK000361 AK299324 NM_001114120 NM_017779	-880644	-	CU688044 BC065304 BC011743 BC035506 BC041580 TSC_hg19_v1_chr1_-_68962723	-880724	-	AK289925 BC075035 BC075036 NM_000329 U18991	-927789	-	TSC_hg19_v1_chr1_+_70032819 BC080568	189413	+	AK294206 TSC_hg19_v1_chr1_+_70033988	190546	+	TSC_hg19_v1_chr1_+_70034033 AF498274	190655	+	AK225735|DEPDC1|55635|DEP domain containing 1##BC003511|DEPDC1|55635|DEP domain containing 1##AB281187|DEPDC1|55635|DEP domain containing 1##AB281274|DEPDC1|55635|DEP domain containing 1##AK000361|DEPDC1|55635|DEP domain containing 1##AK299324|DEPDC1|55635|DEP domain containing 1##NM_001114120|DEPDC1|55635|DEP domain containing 1##NM_017779|DEPDC1|55635|DEP domain containing 1##BC065304|DEPDC1|55635|DEP domain containing 1##BC011743|DEPDC1|55635|DEP domain containing 1##BC035506|DEPDC1|55635|DEP domain containing 1##BC041580|DEPDC1|55635|DEP domain containing 1##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##AF498274|LRRC7|57554|leucine rich repeat containing 7	0.031492	
chr18	48554638	48554753	reg1030021.p2	4.378	+	TSC_hg19_v1_chr18_+_48494409 AK024822 AF308695 AK303027 AK310911 BC014624 AK223507 AB029151	-60274	+	TSC_hg19_v1_chr18_+_48494384 NM_018696	-60345	+	TSC_hg19_v1_chr18_+_48405496 BC000147 AK313391 M55905	-149152	+	TSC_hg19_v1_chr18_+_48556582 NM_005359	1839	+	TSC_hg19_v1_chr18_+_48556613 AK290770 BC002379	1911	+	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	168531	-	AK024822|ELAC1|55520|elaC homolog 1 (E. coli)##AF308695|ELAC1|55520|elaC homolog 1 (E. coli)##AK310911|ELAC1|55520|elaC homolog 1 (E. coli)##BC014624|ELAC1|55520|elaC homolog 1 (E. coli)##AK223507|ELAC1|55520|elaC homolog 1 (E. coli)##AB029151|ELAC1|55520|elaC homolog 1 (E. coli)##NM_018696|ELAC1|55520|elaC homolog 1 (E. coli)##BC000147|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##AK313391|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##M55905|ME2|4200|malic enzyme 2, NAD(+)-dependent, mitochondrial##NM_005359|SMAD4|4089|SMAD family member 4##AK290770|SMAD4|4089|SMAD family member 4##BC002379|SMAD4|4089|SMAD family member 4##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)	0.115134	
chr2	111025519	111025650	reg1032151.p1	4.378	+	TSC_hg19_v1_chr2_-_110970123 BC031315	-55463	-	AJ001815 BC032939 TSC_hg19_v1_chr2_-_110962582 BX571745 NM_000272 NM_001128178 NM_001128179 NM_207181	-62977	-	AF023674 CU679489 BC062574 TSC_hg19_v1_chr2_-_110962561 BC009789 AK299011 AK225600 AK307654	-63029	-	BC094740 NM_001205288 NM_033514	205067	-	NM_005054 U64675	309093	-	AL136868 NM_001037866 NM_001123363 NM_032260	310724	-	BC031315|LINC00116|205251|long intergenic non-protein coding RNA 116##AJ001815|NPHP1|4867|nephronophthisis 1 (juvenile)##BC032939|NPHP1|4867|nephronophthisis 1 (juvenile)##BX571745|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_000272|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128178|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128179|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_207181|NPHP1|4867|nephronophthisis 1 (juvenile)##AF023674|NPHP1|4867|nephronophthisis 1 (juvenile)##BC062574|NPHP1|4867|nephronophthisis 1 (juvenile)##BC009789|NPHP1|4867|nephronophthisis 1 (juvenile)##AK299011|NPHP1|4867|nephronophthisis 1 (juvenile)##AK225600|NPHP1|4867|nephronophthisis 1 (juvenile)##AK307654|NPHP1|4867|nephronophthisis 1 (juvenile)##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5	0.949085	CTCF.p2:0:0.949
chr3	16472921	16473096	reg1033896.p2	4.378	+	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-166300	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	-166619	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-256814	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	82010	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	82216	-	BX648638 AK303026 NM_001190811	173262	-	NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like	0.0	
chr3	59437276	59437389	reg1029342.p2	4.378	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-401572	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-401591	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-401624	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	1799758	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	2109879	+	BC047734 TSC_hg19_v1_chr3_+_61547294	2109954	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.0	
chr5	40578765	40578945	reg1035143.p1	4.378	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-1153538	-	TSC_hg19_v1_chr5_-_39425082 AK314381	-1153791	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	-1153904	-	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	101172	+	TSC_hg19_v1_chr5_+_40680042 L25124	101189	+	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	177185	-	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33	0.0	
chr6	372107	372287	reg1026277.p4	4.378	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-79700	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-80112	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	19567	+	AF508547 BC101697 BC101699 NM_148959	284756	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	320893	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chr9	130793379	130793560	reg1030827.p2	4.378	+	TSC_hg19_v1_chr9_-_130742813 AK058004 NM_001035254	-50660	-	BC137087 BC137088 BC047949 NM_203305 BC142952	-80538	-	BC015233 NM_003863	-92707	-	AK122729 NM_197956	36129	-	TSC_hg19_v1_chr9_+_130830492 AK290991 NM_001006641	37014	+	AJ619990 TSC_hg19_v1_chr9_+_130830643	37150	+	AK058004|FAM102A|399665|family with sequence similarity 102, member A##NM_001035254|FAM102A|399665|family with sequence similarity 102, member A##BC137087|FAM102A|399665|family with sequence similarity 102, member A##BC137088|FAM102A|399665|family with sequence similarity 102, member A##BC047949|FAM102A|399665|family with sequence similarity 102, member A##NM_203305|FAM102A|399665|family with sequence similarity 102, member A##BC142952|FAM102A|399665|family with sequence similarity 102, member A##BC015233|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##NM_003863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1##AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	0.0	
chr9	37191778	37191928	reg1033887.p1	4.378	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-71270	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-71345	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-71367	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	230853	+	BC010007 TSC_hg19_v1_chr9_-_37465267	273407	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	273542	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.298735	CTCF.p2:29:0.299
chrX	114972666	114972846	reg1006605.p2	4.378	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-144888	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-175714	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-177150	+	BC003645 TSC_hg19_v1_chrX_-_115085443	112683	-	AK313927 NM_000686 X87723 U16957	329239	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	595011	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chrX	117359871	117360051	reg1006141.p2	4.378	+	AK302713 NM_001168301	-108659	-	AL591986 TSC_hg19_v1_chrX_-_117250764 AK316509 NM_001168302 NM_001168303	-109236	-	AK296324 NM_001168299	-240633	-	TSC_hg19_v1_chrX_+_117480068 NM_001184965 NM_001184966 NM_019045 AK127556 BX537578 AL833605 BX538087 AK299711 BC028697 BX648150	120204	+	TSC_hg19_v1_chrX_+_117480490 AM393332 AM393787 EU831942 EU832037 AK304432	120501	+	TSC_hg19_v1_chrX_+_117526665 AL834210	166726	+	AK302713|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168301|KLHL13|90293|kelch-like 13 (Drosophila)##AL591986|KLHL13|90293|kelch-like 13 (Drosophila)##AK316509|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)##AK296324|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001184965|WDR44|54521|WD repeat domain 44##NM_001184966|WDR44|54521|WD repeat domain 44##NM_019045|WDR44|54521|WD repeat domain 44##AK127556|WDR44|54521|WD repeat domain 44##BX537578|WDR44|54521|WD repeat domain 44##AL833605|WDR44|54521|WD repeat domain 44##BX538087|WDR44|54521|WD repeat domain 44##AK299711|WDR44|54521|WD repeat domain 44##BC028697|WDR44|54521|WD repeat domain 44##BX648150|WDR44|54521|WD repeat domain 44##AM393332|WDR44|54521|WD repeat domain 44##AM393787|WDR44|54521|WD repeat domain 44##EU831942|WDR44|54521|WD repeat domain 44##EU832037|WDR44|54521|WD repeat domain 44##AK304432|WDR44|54521|WD repeat domain 44##AL834210|WDR44|54521|WD repeat domain 44	0.0	
chr12	10162624	10162719	reg1026458.p2	4.377	+	BX647321 AB528702 AF124841 AY358599 NM_001099431 NM_016509	-10878	-	NM_138337 NM_201623 AK314001 BC126289 BC126291 AF247788 BC063424 BC027967 AY426759 AY498550 AY498551 AY498552 CU687708 HQ258146	-38570	+	AY547296 NM_001207010	-58757	+	AY358810 AK128243 NM_001129998 NM_205852 BC136805 BC136806 AK131027 BC036036 DQ368812	620	+	AY358265 NM_207345 AK307335	20604	+	CU691652 DQ892440 DQ895651 AK300979 AK291584 BC039072 AK313589 AK075114 BC067746 AF200949 NM_016511 AK091989 AX747295 AY358587	88920	-	BX647321|CLEC1B|51266|C-type lectin domain family 1, member B##AF124841|CLEC1B|51266|C-type lectin domain family 1, member B##AY358599|CLEC1B|51266|C-type lectin domain family 1, member B##NM_001099431|CLEC1B|51266|C-type lectin domain family 1, member B##NM_016509|CLEC1B|51266|C-type lectin domain family 1, member B##NM_138337|CLEC12A|160364|C-type lectin domain family 12, member A##NM_201623|CLEC12A|160364|C-type lectin domain family 12, member A##AK314001|CLEC12A|160364|C-type lectin domain family 12, member A##BC126289|CLEC12A|160364|C-type lectin domain family 12, member A##BC126291|CLEC12A|160364|C-type lectin domain family 12, member A##AF247788|CLEC12A|160364|C-type lectin domain family 12, member A##BC063424|CLEC12A|160364|C-type lectin domain family 12, member A##BC027967|CLEC12A|160364|C-type lectin domain family 12, member A##AY426759|CLEC12A|160364|C-type lectin domain family 12, member A##AY498550|CLEC12A|160364|C-type lectin domain family 12, member A##AY498551|CLEC12A|160364|C-type lectin domain family 12, member A##AY498552|CLEC12A|160364|C-type lectin domain family 12, member A##HQ258146|CLEC12B|387837|C-type lectin domain family 12, member B##AY547296|CLEC12A|160364|C-type lectin domain family 12, member A##NM_001207010|CLEC12A|160364|C-type lectin domain family 12, member A##AY358810|CLEC12B|387837|C-type lectin domain family 12, member B##AK128243|CLEC12B|387837|C-type lectin domain family 12, member B##NM_001129998|CLEC12B|387837|C-type lectin domain family 12, member B##NM_205852|CLEC12B|387837|C-type lectin domain family 12, member B##BC136805|CLEC12B|387837|C-type lectin domain family 12, member B##BC136806|CLEC12B|387837|C-type lectin domain family 12, member B##AK131027|CLEC12B|387837|C-type lectin domain family 12, member B##BC036036|CLEC12B|387837|C-type lectin domain family 12, member B##DQ368812|CLEC12B|387837|C-type lectin domain family 12, member B##AY358265|CLEC9A|283420|C-type lectin domain family 9, member A##NM_207345|CLEC9A|283420|C-type lectin domain family 9, member A##AK307335|CLEC9A|283420|C-type lectin domain family 9, member A##DQ892440|CLEC1A|51267|C-type lectin domain family 1, member A##DQ895651|CLEC1A|51267|C-type lectin domain family 1, member A##AK300979|CLEC1A|51267|C-type lectin domain family 1, member A##AK291584|CLEC1A|51267|C-type lectin domain family 1, member A##BC039072|CLEC1A|51267|C-type lectin domain family 1, member A##AK313589|CLEC1A|51267|C-type lectin domain family 1, member A##AK075114|CLEC1A|51267|C-type lectin domain family 1, member A##BC067746|CLEC1A|51267|C-type lectin domain family 1, member A##AF200949|CLEC1A|51267|C-type lectin domain family 1, member A##NM_016511|CLEC1A|51267|C-type lectin domain family 1, member A##AK091989|CLEC1A|51267|C-type lectin domain family 1, member A##AY358587|CLEC1A|51267|C-type lectin domain family 1, member A	0.994151	CTCF.p2:1:0.994
chr1_gl000192_random	543686	543825	reg1029384.p1	4.377	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.010393	
chr2	43653823	43654004	reg1023810.p2	4.377	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-200171	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-200183	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-200568	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	169235	-	TSC_hg19_v1_chr2_+_43864411 BC063310	210500	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	210526	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.0	
chr6	14118015	14118133	reg1030756.p1	4.377	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-52	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-169	+	NM_001251901	-588	+	TSC_hg19_v1_chr6_+_15245702 AK302624	1127643	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	1128338	+	BC033996 TSC_hg19_v1_chr6_-_15248900	1130827	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.0	
chr6	21594263	21594443	reg1024472.p3	4.377	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1059630	+	CR749285 NM_001243076	-1190320	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-1192250	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	19	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	72306	+	BC015850 NM_000948	703376	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.0	
chr7	116238480	116238589	reg1032226.p1	4.377	+	NM_001172896 TSC_hg19_v1_chr7_+_116166415 AF172085 NM_001172897 AK307501 EF649773 EF649774 AB209926	-72130	+	TSC_hg19_v1_chr7_+_116165089 Z18951 BC082246 DQ890647 DQ893827 EU176473 AB489179 AM393679 AB451284 AB451416 BT007143	-73432	+	BC009685 TSC_hg19_v1_chr7_+_116165054 BC006432 NM_001172895 AY762103	-73476	+	TSC_hg19_v1_chr7_+_116312490 EU176015 J02958 NM_000245 NM_001127500 X54559 DQ656040 BC130420 AK309532	73938	+	AK296974 TSC_hg19_v1_chr7_+_116364175	125641	+	TSC_hg19_v1_chr7_+_116395441 BC127890	156917	+	NM_001172896|CAV1|857|caveolin 1, caveolae protein, 22kDa##AF172085|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172897|CAV1|857|caveolin 1, caveolae protein, 22kDa##AK307501|CAV1|857|caveolin 1, caveolae protein, 22kDa##EF649773|CAV1|857|caveolin 1, caveolae protein, 22kDa##EF649774|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB209926|CAV1|857|caveolin 1, caveolae protein, 22kDa##Z18951|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC082246|CAV1|857|caveolin 1, caveolae protein, 22kDa##DQ890647|CAV1|857|caveolin 1, caveolae protein, 22kDa##DQ893827|CAV1|857|caveolin 1, caveolae protein, 22kDa##EU176473|CAV1|857|caveolin 1, caveolae protein, 22kDa##AM393679|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB451284|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB451416|CAV1|857|caveolin 1, caveolae protein, 22kDa##BT007143|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC009685|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC006432|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172895|CAV1|857|caveolin 1, caveolae protein, 22kDa##AY762103|CAV1|857|caveolin 1, caveolae protein, 22kDa##EU176015|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK296974|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	0.641336	CTCF.p2:-7:0.641
chr9	126900012	126900192	reg1018156.p2	4.377	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-126031	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-126219	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-207791	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	119908	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	120143	+	TSC_hg19_v1_chr9_+_127020255 AB026289	120162	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr1	150402423	150402550	reg1033020.p1	4.376	+	TSC_hg19_v1_chr1_+_150337184 AK291703 AK304380 AK056707 AK308148 AF161362 BC045623 AB007929 EU832460 EU832492 EU832542 EU832573 AB527168	-65264	+	NM_015203 TSC_hg19_v1_chr1_+_150337109	-65430	+	TSC_hg19_v1_chr1_+_150336622 BX641025	-65841	+	TSC_hg19_v1_chr1_+_150459910 AK298773 AK022590 BC000541 AK315507 AK222814 AY450558	57406	+	TSC_hg19_v1_chr1_+_150459916 AK225368 BC009997 NM_025150 AB384782 BC007824	57446	+	NM_001202858 NM_004425 NM_022664 TSC_hg19_v1_chr1_+_150480582 AK097205 AK097046 BC023505 DQ010946 DQ112074 U68186 U68187	78048	+	AK291703|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AK304380|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AK056707|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AK308148|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AF161362|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##BC045623|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AB007929|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##EU832460|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##EU832492|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##EU832542|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##EU832573|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##NM_015203|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##BX641025|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AK298773|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AK022590|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##BC000541|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AK315507|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AK222814|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AY450558|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AK225368|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##BC009997|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##NM_025150|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##BC007824|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##NM_001202858|ECM1|1893|extracellular matrix protein 1##NM_004425|ECM1|1893|extracellular matrix protein 1##NM_022664|ECM1|1893|extracellular matrix protein 1##AK097205|ECM1|1893|extracellular matrix protein 1##AK097046|ECM1|1893|extracellular matrix protein 1##BC023505|ECM1|1893|extracellular matrix protein 1##U68186|ECM1|1893|extracellular matrix protein 1##U68187|ECM1|1893|extracellular matrix protein 1	0.0	
chr12	27361121	27361250	reg1029092.p1	4.376	+	NM_001080406	-125731	-	TSC_hg19_v1_chr12_+_27175501 U46837 U52960 AB463863 EU446930 AK311838 CR456999	-185670	+	AK309064 BC008380 NM_004264 TSC_hg19_v1_chr12_+_27175482	-185703	+	NM_015000 BC028603 TSC_hg19_v1_chr12_+_27397168	35939	+	TSC_hg19_v1_chr12_+_27397187 AK291055	36002	+	TSC_hg19_v1_chr12_+_27397225 AK304755	36040	+	NM_001080406|C12orf71|728858|chromosome 12 open reading frame 71##U46837|MED21|9412|mediator complex subunit 21##U52960|MED21|9412|mediator complex subunit 21##EU446930|MED21|9412|mediator complex subunit 21##AK311838|MED21|9412|mediator complex subunit 21##CR456999|MED21|9412|mediator complex subunit 21##AK309064|MED21|9412|mediator complex subunit 21##BC008380|MED21|9412|mediator complex subunit 21##NM_004264|MED21|9412|mediator complex subunit 21##NM_015000|STK38L|23012|serine/threonine kinase 38 like##BC028603|STK38L|23012|serine/threonine kinase 38 like##AK291055|STK38L|23012|serine/threonine kinase 38 like##AK304755|STK38L|23012|serine/threonine kinase 38 like	0.021199	
chr13	91900172	91900294	reg1030676.p2	4.376	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3575364	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5526794	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7443733	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	150671	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1979194	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3231593	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.908358	CTCF.p2:4:0.908
chr14	100784638	100784740	reg1025069.p1	4.376	+	TSC_hg19_v1_chr14_-_100772779 AK096294 AK123821 AK310069 BC142945 AK172788 BX247983 NM_001039355	-11850	-	TSC_hg19_v1_chr14_+_100705474 BC037308 M76541 BC020324 BC065366 AB464361 DQ891638 EU176600 CU691478	-79183	+	TSC_hg19_v1_chr14_+_100705309 M77698	-79377	+	AK092001 AX747302 TSC_hg19_v1_chr14_+_100789675 AB073385 AY569438 AY570298 NM_207117 BX248260 BC137253 BC137254 BC144549	4997	+	X59892 TSC_hg19_v1_chr14_-_100841685 BC095453 M61715	57002	-	TSC_hg19_v1_chr14_-_100841813 BC017489 AK300255	57115	-	AK096294|SLC25A29|123096|solute carrier family 25, member 29##AK123821|SLC25A29|123096|solute carrier family 25, member 29##AK310069|SLC25A29|123096|solute carrier family 25, member 29##AK172788|SLC25A29|123096|solute carrier family 25, member 29##BX247983|SLC25A29|123096|solute carrier family 25, member 29##NM_001039355|SLC25A29|123096|solute carrier family 25, member 29##BC037308|YY1|7528|YY1 transcription factor##M76541|YY1|7528|YY1 transcription factor##BC020324|YY1|7528|YY1 transcription factor##BC065366|YY1|7528|YY1 transcription factor##DQ891638|YY1|7528|YY1 transcription factor##EU176600|YY1|7528|YY1 transcription factor##M77698|YY1|7528|YY1 transcription factor##AK092001|SLC25A47|283600|solute carrier family 25, member 47##AB073385|SLC25A47|283600|solute carrier family 25, member 47##AY569438|SLC25A47|283600|solute carrier family 25, member 47##AY570298|SLC25A47|283600|solute carrier family 25, member 47##NM_207117|SLC25A47|283600|solute carrier family 25, member 47##BX248260|SLC25A47|283600|solute carrier family 25, member 47##BC137253|SLC25A47|283600|solute carrier family 25, member 47##BC137254|SLC25A47|283600|solute carrier family 25, member 47##BC144549|SLC25A47|283600|solute carrier family 25, member 47##X59892|WARS|7453|tryptophanyl-tRNA synthetase##BC095453|WARS|7453|tryptophanyl-tRNA synthetase##M61715|WARS|7453|tryptophanyl-tRNA synthetase##BC017489|WARS|7453|tryptophanyl-tRNA synthetase##AK300255|WARS|7453|tryptophanyl-tRNA synthetase	0.937615	CTCF.p2:29:0.938
chr14	54080382	54080472	reg1026391.p1	4.376	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-460377	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-460459	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-460554	-	NM_130851	340842	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	343106	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	783294	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.019828	
chr14	61201367	61201513	reg1030999.p1	4.376	+	TSC_hg19_v1_chr14_-_61191035 AK309358	-10383	-	AF032107 TSC_hg19_v1_chr14_-_61190584 BC098135 BC098282 BC099722 BC101934 EU446619 EU446844 NM_017420	-10786	-	BT007083 CU679159 TSC_hg19_v1_chr14_-_61116196 BC008874 NM_005982 X91868	-85350	-	TSC_hg19_v1_chr14_+_61201489 NM_001177963 NM_002431 BC000820 AK308701 U61835 X87843 X92669 AB463879 CU674412 CR450336	75	+	BC136606 BC136607 AK293158 BC108284 NM_020810	246306	-	NM_001172702 NM_153811 AF543422 TSC_hg19_v1_chr14_+_61447920	246437	+	AK309358|SIX4|51804|SIX homeobox 4##AF032107|SIX4|51804|SIX homeobox 4##BC098135|SIX4|51804|SIX homeobox 4##BC098282|SIX4|51804|SIX homeobox 4##BC099722|SIX4|51804|SIX homeobox 4##BC101934|SIX4|51804|SIX homeobox 4##EU446619|SIX4|51804|SIX homeobox 4##EU446844|SIX4|51804|SIX homeobox 4##NM_017420|SIX4|51804|SIX homeobox 4##BT007083|SIX1|6495|SIX homeobox 1##BC008874|SIX1|6495|SIX homeobox 1##NM_005982|SIX1|6495|SIX homeobox 1##X91868|SIX1|6495|SIX homeobox 1##NM_001177963|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##NM_002431|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##BC000820|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##AK308701|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##U61835|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##X87843|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##X92669|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##CR450336|MNAT1|4331|menage a trois homolog 1, cyclin H assembly factor (Xenopus laevis)##BC136606|TRMT5|57570|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)##BC136607|TRMT5|57570|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)##AK293158|TRMT5|57570|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)##BC108284|TRMT5|57570|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)##NM_020810|TRMT5|57570|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)##NM_001172702|SLC38A6|145389|solute carrier family 38, member 6##NM_153811|SLC38A6|145389|solute carrier family 38, member 6##AF543422|SLC38A6|145389|solute carrier family 38, member 6	0.0	
chr15	75069862	75069977	reg1031321.p1	4.376	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-28727	+	AK310810 AM233517 AM233518 AM233519 AM233520 AM236046 AM236047 BC023019 AY871801 K03191 AK223108 AK223113 AK313880 NM_000499	-52126	-	TSC_hg19_v1_chr15_-_74988360 BC011534 BC021271 AK056339 NM_001142443 NM_001142444 NM_025083	-81556	-	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	4506	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	4937	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	35253	+	NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK310810|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233517|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233518|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233519|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233520|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236046|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236047|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC023019|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AY871801|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##K03191|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223108|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223113|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK313880|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##NM_000499|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC011534|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC021271|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK056339|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142443|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142444|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_025083|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like	0.0	
chr17	22100321	22100439	reg1030612.p1	4.376	+	NM_001190452	-77944	+	TSC_hg19_v1_chr17_-_21454933 AK056436 BC132738 BC136630 BC019938 BC010612 BC052777 BC053952 NM_001113434	-645457	-	FJ434338 NM_001194958	-791933	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	3520742	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	3520901	+	BC035488 BC042106 NM_014238	3698649	+	NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##AK056436|C17orf51|339263|chromosome 17 open reading frame 51##BC132738|C17orf51|339263|chromosome 17 open reading frame 51##BC136630|C17orf51|339263|chromosome 17 open reading frame 51##BC019938|C17orf51|339263|chromosome 17 open reading frame 51##BC010612|C17orf51|339263|chromosome 17 open reading frame 51##BC052777|C17orf51|339263|chromosome 17 open reading frame 51##BC053952|C17orf51|339263|chromosome 17 open reading frame 51##NM_001113434|C17orf51|339263|chromosome 17 open reading frame 51##FJ434338|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##NM_001194958|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1	0.998253	CTCF.p2:36:0.998
chr2	106586126	106586242	reg1030451.p1	4.376	+	NM_001004720 BC000103	-117923	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	-153209	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	-224641	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	95980	+	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	224561	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	224574	-	NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1	0.308325	CTCF.p2:24:0.308
chr22	20015629	20015745	reg1031432.p1	4.376	+	AK297922 AK298593 TSC_hg19_v1_chr22_+_20008634 AK297075 AK316020 AK092484 AX747566 CR627452	-7044	+	TSC_hg19_v1_chr22_+_20008632 AK316056 BC041339 NM_152906 AK301054 AK301366 AK311676	-7070	+	TSC_hg19_v1_chr22_-_20004347 NM_001670 U51269	-11364	-	TSC_hg19_v1_chr22_+_20067801 NM_001190326 NM_022720 AK313357 BC037564 BC009984	52095	+	AB527162 CU013064 CU013352 CU680570 BC013352 BC108251 TSC_hg19_v1_chr22_-_20104501 CR456354	88796	-	TSC_hg19_v1_chr22_-_20104718 BC017184	89024	-	AK297922|C22orf25|128989|chromosome 22 open reading frame 25##AK298593|C22orf25|128989|chromosome 22 open reading frame 25##AK297075|C22orf25|128989|chromosome 22 open reading frame 25##AK316020|C22orf25|128989|chromosome 22 open reading frame 25##AK092484|C22orf25|128989|chromosome 22 open reading frame 25##CR627452|C22orf25|128989|chromosome 22 open reading frame 25##AK316056|C22orf25|128989|chromosome 22 open reading frame 25##BC041339|C22orf25|128989|chromosome 22 open reading frame 25##NM_152906|C22orf25|128989|chromosome 22 open reading frame 25##AK301054|C22orf25|128989|chromosome 22 open reading frame 25##AK301366|C22orf25|128989|chromosome 22 open reading frame 25##AK311676|C22orf25|128989|chromosome 22 open reading frame 25##NM_001670|ARVCF|421|armadillo repeat gene deleted in velocardiofacial syndrome##U51269|ARVCF|421|armadillo repeat gene deleted in velocardiofacial syndrome##NM_001190326|DGCR8|54487|DiGeorge syndrome critical region gene 8##NM_022720|DGCR8|54487|DiGeorge syndrome critical region gene 8##AK313357|DGCR8|54487|DiGeorge syndrome critical region gene 8##BC037564|DGCR8|54487|DiGeorge syndrome critical region gene 8##BC009984|DGCR8|54487|DiGeorge syndrome critical region gene 8##BC013352|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)##BC108251|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)##CR456354|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)##BC017184|TRMT2A|27037|TRM2 tRNA methyltransferase 2 homolog A (S. cerevisiae)	0.0	
chr10	112602912	112603087	reg1020940.p4	4.375	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-198870	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-258884	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-275507	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	28613	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	28715	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	75697	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.0	
chr1	207683134	207683203	reg1041132.p2	4.375	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	-13590	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-55507	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-188063	+	NM_175710 BC109190 BC109191	135319	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	242225	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	242315	+	NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein	0.0	
chr12	110462767	110462875	reg1028310.p1	4.375	+	AK302535 BC032833 TSC_hg19_v1_chr12_+_110437393 CU691256 AY364251	-25378	+	TSC_hg19_v1_chr12_+_110437339 AF064604	-25488	+	TSC_hg19_v1_chr12_+_110437234 AK025261 BC057817 NM_033121	-25560	+	TSC_hg19_v1_chr12_-_110486328 AK021447 BC041968	23508	-	AK097461 NM_207435	42678	-	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	99400	+	AK302535|ANKRD13A|88455|ankyrin repeat domain 13A##BC032833|ANKRD13A|88455|ankyrin repeat domain 13A##AY364251|ANKRD13A|88455|ankyrin repeat domain 13A##AF064604|ANKRD13A|88455|ankyrin repeat domain 13A##AK025261|ANKRD13A|88455|ankyrin repeat domain 13A##BC057817|ANKRD13A|88455|ankyrin repeat domain 13A##NM_033121|ANKRD13A|88455|ankyrin repeat domain 13A##AK021447|C12orf76|400073|chromosome 12 open reading frame 76##BC041968|C12orf76|400073|chromosome 12 open reading frame 76##AK097461|C12orf76|400073|chromosome 12 open reading frame 76##NM_207435|C12orf76|400073|chromosome 12 open reading frame 76##NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)	0.924884	CTCF.p2:13:0.925
chr12	116844497	116844606	reg1027875.p1	4.375	+	TSC_hg19_v1_chr12_-_116715263 AY338463	-129391	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	-129601	-	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-1722411	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	126678	+	NM_001085481	152634	+	TSC_hg19_v1_chr12_-_117175822 AK309652 BC019843 AK025068 NM_024738	331187	-	AY338463|MED13L|23389|mediator complex subunit 13-like##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173##NM_001085481|MAP1LC3B2|643246|microtubule-associated protein 1 light chain 3 beta 2##AK309652|C12orf49|79794|chromosome 12 open reading frame 49##BC019843|C12orf49|79794|chromosome 12 open reading frame 49##AK025068|C12orf49|79794|chromosome 12 open reading frame 49##NM_024738|C12orf49|79794|chromosome 12 open reading frame 49	0.0	
chr12	90274589	90274770	reg1031751.p2	4.375	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-171134	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-171992	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-224828	-	BC026075 BC024183 BC027600 BC034491 NM_152638	1074272	-	U59111 TSC_hg19_v1_chr12_-_91398750	1124068	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	1124100	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.0	
chr12	95730393	95730494	reg1031318.p1	4.375	+	TSC_hg19_v1_chr12_+_95676175 AL133113	-54225	+	TSC_hg19_v1_chr12_+_95611582 NM_017599 AK001338 AK225303 AK309943 AK225356 BC014443 AK307864 AL137497 BC064939 BC028597	-118749	+	TSC_hg19_v1_chr12_-_95611206 BC125225 BC125226 BX538322 AK124904 NM_018351	-119207	-	NM_006838 AK300836 TSC_hg19_v1_chr12_+_95867927 AK315559 U13261 AK055692 U29607 BC013782 AK091730 AX747149 AB463882 DQ891013 DQ894193	137454	+	AK027434 TSC_hg19_v1_chr12_-_95942575 BC030704 NM_001042403	212171	-	AL136825 NM_032147	214801	-	AL133113|VEZT|55591|vezatin, adherens junctions transmembrane protein##NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein##AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##NM_006838|METAP2|10988|methionyl aminopeptidase 2##AK300836|METAP2|10988|methionyl aminopeptidase 2##AK315559|METAP2|10988|methionyl aminopeptidase 2##U13261|METAP2|10988|methionyl aminopeptidase 2##AK055692|METAP2|10988|methionyl aminopeptidase 2##BC013782|METAP2|10988|methionyl aminopeptidase 2##AK091730|METAP2|10988|methionyl aminopeptidase 2##DQ891013|METAP2|10988|methionyl aminopeptidase 2##DQ894193|METAP2|10988|methionyl aminopeptidase 2##AK027434|USP44|84101|ubiquitin specific peptidase 44##BC030704|USP44|84101|ubiquitin specific peptidase 44##NM_001042403|USP44|84101|ubiquitin specific peptidase 44##AL136825|USP44|84101|ubiquitin specific peptidase 44##NM_032147|USP44|84101|ubiquitin specific peptidase 44	0.0	
chr4	44451016	44451149	reg1035430.p1	4.375	+	AK123347 NM_198353	-259	-	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	-529	-	AB528853 NM_001080476	-1555801	+	AK096895 BC103995 BC103996 NM_182592	202575	-	TSC_hg19_v1_chr4_+_44680469 NM_021927 BX647242 BC036768 BC012338 AK225314 AK023282 AK308667	229378	+	TSC_hg19_v1_chr4_-_44728574 AK296051 AB209904 AK055639 AY173948 AK129655 AK308920 AF247786 NM_138335	277482	-	AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7##NM_021927|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BX647242|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC036768|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC012338|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK225314|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK023282|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK308667|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2	0.498596	CTCF.p2:0:0.499
chrX	69774109	69774216	reg1030017.p1	4.375	+	TSC_hg19_v1_chrX_+_69674948 AK303377 NM_001166278	-99228	+	TSC_hg19_v1_chrX_+_69672415 AK304020 AK316518	-101756	+	TSC_hg19_v1_chrX_+_69672143 AB033058 NM_020730	-101987	+	AK057523 AK292471 BC036016 NM_001003811 NM_031276	354401	-	AF320612 BC033816 AX721169 BC021242 AK074865 AK075014 NM_001048164 NM_032803	376787	-	BT007203 TSC_hg19_v1_chrX_-_70288224 BC080535 AF171229 BC103847 BC103848 BC020559 NM_013346 AK312977	514038	-	AK303377|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_001166278|DLG3|1741|discs, large homolog 3 (Drosophila)##AK304020|DLG3|1741|discs, large homolog 3 (Drosophila)##AK316518|DLG3|1741|discs, large homolog 3 (Drosophila)##AB033058|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_020730|DLG3|1741|discs, large homolog 3 (Drosophila)##AK057523|TEX11|56159|testis expressed 11##AK292471|TEX11|56159|testis expressed 11##BC036016|TEX11|56159|testis expressed 11##NM_001003811|TEX11|56159|testis expressed 11##NM_031276|TEX11|56159|testis expressed 11##AF320612|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##BC033816|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK074865|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK075014|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_001048164|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_032803|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##BT007203|SNX12|29934|sorting nexin 12##BC080535|SNX12|29934|sorting nexin 12##AF171229|SNX12|29934|sorting nexin 12##BC103847|SNX12|29934|sorting nexin 12##BC103848|SNX12|29934|sorting nexin 12##BC020559|SNX12|29934|sorting nexin 12##NM_013346|SNX12|29934|sorting nexin 12##AK312977|SNX12|29934|sorting nexin 12	0.022141	
chr1	118620051	118620212	reg1032878.p2	4.374	+	TSC_hg19_v1_chr1_+_118472364 NM_006784 AK292438 AF083217 BC128385 BC128454 BC148244	-147753	+	BC058836 TSC_hg19_v1_chr1_+_118472357	-147778	+	AK000149 BC013324 TSC_hg19_v1_chr1_-_118472244 NM_001135589 NM_017686	-147878	-	AB527095 AK091816 AX747199 AY555274 BX648110 NM_206996	107682	-	AK127536 NM_152380	912047	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	1062895	+	NM_006784|WDR3|10885|WD repeat domain 3##AK292438|WDR3|10885|WD repeat domain 3##AF083217|WDR3|10885|WD repeat domain 3##BC058836|WDR3|10885|WD repeat domain 3##AK000149|GDAP2|54834|ganglioside induced differentiation associated protein 2##BC013324|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_001135589|GDAP2|54834|ganglioside induced differentiation associated protein 2##NM_017686|GDAP2|54834|ganglioside induced differentiation associated protein 2##AK091816|SPAG17|200162|sperm associated antigen 17##AY555274|SPAG17|200162|sperm associated antigen 17##BX648110|SPAG17|200162|sperm associated antigen 17##NM_206996|SPAG17|200162|sperm associated antigen 17##AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15	0.998533	CTCF.p2:-13:0.999
chr12	124978027	124978186	reg1022135.p1	4.374	+	AK126577 NM_181709	-204397	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-520377	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-520907	-	TSC_hg19_v1_chr12_-_125002875 BC033087	24753	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	73969	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	370199	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr14	69865099	69865215	reg1031009.p1	4.374	+	NM_001252151 NM_001252152 AK293222 AK316381 TSC_hg19_v1_chr14_+_69865137	-39	+	BC071709 TSC_hg19_v1_chr14_-_69865012 BC014301 AK130850 AK312186 D85758 NM_004450 U66871	-154	-	AK299588 TSC_hg19_v1_chr14_+_69726876 AB032956 BC122545 BC098578 AK315848 AK289745 BC036812 AB384119 AB078143 AJ505951	-138220	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	238	+	TSC_hg19_v1_chr14_+_69865419 BC047682	279	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	86323	+	NM_001252151|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252152|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK293222|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK316381|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##BC071709|ERH|2079|enhancer of rudimentary homolog (Drosophila)##BC014301|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK130850|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK312186|ERH|2079|enhancer of rudimentary homolog (Drosophila)##D85758|ERH|2079|enhancer of rudimentary homolog (Drosophila)##NM_004450|ERH|2079|enhancer of rudimentary homolog (Drosophila)##U66871|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK299588|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AB032956|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC122545|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC098578|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK315848|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK289745|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC036812|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AB078143|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AJ505951|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##BC047682|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1	0.0	
chr14	95732050	95732224	reg1022774.p2	4.374	+	TSC_hg19_v1_chr14_+_95624023 BC040596	-108116	+	TSC_hg19_v1_chr14_-_95623867 BC046934 AB023145 BC150287 NM_177438	-108345	-	AY929254 AY929255 AY929256 TSC_hg19_v1_chr14_-_95623633	-108515	-	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	54046	-	AK131436 BC146604 BX248076 NM_152592	209967	-	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	268878	-	BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC046934|DICER1|23405|dicer 1, ribonuclease type III##AB023145|DICER1|23405|dicer 1, ribonuclease type III##BC150287|DICER1|23405|dicer 1, ribonuclease type III##NM_177438|DICER1|23405|dicer 1, ribonuclease type III##AY929254|DICER1|23405|dicer 1, ribonuclease type III##AY929255|DICER1|23405|dicer 1, ribonuclease type III##AY929256|DICER1|23405|dicer 1, ribonuclease type III##AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)	0.086474	
chr15	70021843	70021912	reg1003715.p2	4.374	+	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-276656	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-314515	-	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	-315131	+	BC015421 TSC_hg19_v1_chr15_-_70341948	320032	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	368350	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	368366	-	NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.0	
chr16	89424003	89424088	reg1035116.p2	4.374	+	AK293862 NM_001242885	-36505	+	BC041585 TSC_hg19_v1_chr16_-_89351073	-73089	-	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	-73971	-	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	132886	-	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	150769	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	203020	+	AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC041585|ANKRD11|29123|ankyrin repeat domain 11##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13	0.175837	
chr18	9069754	9069900	reg1032522.p1	4.374	+	AB384528 TSC_hg19_v1_chr18_+_8718600	-351303	+	AK131528 NM_015210	-352459	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	-460081	+	TSC_hg19_v1_chr18_+_9102620 NM_021074	32795	+	TSC_hg19_v1_chr18_+_9102715 AK312129 BC001632 BC017487 M22538 AK291865 AB590136 BC071689 DQ892593 DQ895813 CR456928	32893	+	TSC_hg19_v1_chr18_+_9136811 NM_001083625 NM_015208 BC070234 AK024808 AY373757 BC057225 AL834204	66964	+	AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165##NM_021074|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK312129|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC001632|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC017487|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##M22538|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK291865|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC071689|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ892593|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ895813|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##CR456928|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##NM_001083625|ANKRD12|23253|ankyrin repeat domain 12##NM_015208|ANKRD12|23253|ankyrin repeat domain 12##BC070234|ANKRD12|23253|ankyrin repeat domain 12##AK024808|ANKRD12|23253|ankyrin repeat domain 12##AY373757|ANKRD12|23253|ankyrin repeat domain 12##BC057225|ANKRD12|23253|ankyrin repeat domain 12##AL834204|ANKRD12|23253|ankyrin repeat domain 12	0.063889	
chr19	6260991	6261131	reg1033479.p1	4.374	+	TSC_hg19_v1_chr19_-_6199558 AK056073	-61514	-	AY009107 BC022027 AK093433 AX748123 AK302604 AJ577571 NM_030924 BC090046 AL136854	-125308	+	TSC_hg19_v1_chr19_-_6110613 BC028579 AK303321 NM_000635 NM_134433	-150449	-	AB463904 TSC_hg19_v1_chr19_-_6279803	18742	-	TSC_hg19_v1_chr19_-_6279967 D14539 NM_005934	18904	-	AF347024 BC112122 BC112124 NM_133492	72539	-	AY009107|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC022027|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK093433|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AK302604|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AJ577571|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##NM_030924|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC090046|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##AL136854|ACSBG2|81616|acyl-CoA synthetase bubblegum family member 2##BC028579|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##AK303321|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_000635|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##NM_134433|RFX2|5990|regulatory factor X, 2 (influences HLA class II expression)##D14539|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1##NM_005934|MLLT1|4298|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1##AF347024|ACER1|125981|alkaline ceramidase 1##BC112122|ACER1|125981|alkaline ceramidase 1##BC112124|ACER1|125981|alkaline ceramidase 1##NM_133492|ACER1|125981|alkaline ceramidase 1	0.015372	
chr7	127432932	127433046	reg1030679.p1	4.374	+	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	-140653	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	-140753	+	TSC_hg19_v1_chr7_+_127292198 NM_014390	-140807	+	BC111561 BC111745 AF196976 AJ297858 NM_022143 AK172751 TSC_hg19_v1_chr7_-_127671066 AK314047	238047	-	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	448344	+	CU680694 TSC_hg19_v1_chr7_-_127983862	550865	-	BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##NM_014390|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BC111561|LRRC4|64101|leucine rich repeat containing 4##BC111745|LRRC4|64101|leucine rich repeat containing 4##AF196976|LRRC4|64101|leucine rich repeat containing 4##AJ297858|LRRC4|64101|leucine rich repeat containing 4##NM_022143|LRRC4|64101|leucine rich repeat containing 4##AK172751|LRRC4|64101|leucine rich repeat containing 4##AK314047|LRRC4|64101|leucine rich repeat containing 4##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin	0.829547	CTCF.p2:0:0.830
chrX	7002217	7002358	reg1033192.p1	4.374	+	AF167078 AF167079 NM_016379	-549129	-	AK055471 BC034018 NM_181332	-855607	-	AB033086 AF376803 AX773938 NM_020742	-856400	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	63664	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	63905	-	NM_000351 M16505 J04964 AK314034	135214	+	AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S	0.034201	
chr19	2607886	2608064	reg1029019.p1	4.373	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-131737	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-151015	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-151039	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	94720	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	94767	-	AK124445 TSC_hg19_v1_chr19_-_2717420	109374	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr9	77567251	77567390	reg1031841.p1	4.373	+	AF350881 AK057748 NM_017662	-64311	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	-64586	-	AY333284 NM_001177311	-65058	-	BC039588 TSC_hg19_v1_chr9_-_77567803 AK225349 AK000972 NM_017998	453	-	TSC_hg19_v1_chr9_-_77643032 BX647386	75750	-	CU689816 EU832520 EU832602 TSC_hg19_v1_chr9_-_77643174	75845	-	AF350881|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AK057748|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_017662|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333284|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177311|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##BC039588|C9orf40|55071|chromosome 9 open reading frame 40##AK225349|C9orf40|55071|chromosome 9 open reading frame 40##AK000972|C9orf40|55071|chromosome 9 open reading frame 40##NM_017998|C9orf40|55071|chromosome 9 open reading frame 40##BX647386|C9orf41|138199|chromosome 9 open reading frame 41##EU832520|C9orf41|138199|chromosome 9 open reading frame 41##EU832602|C9orf41|138199|chromosome 9 open reading frame 41	0.0	
chr11	102463829	102463946	reg1029887.p1	4.372	+	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	-62428	-	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-140274	-	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-245859	+	AB527354 NM_004771 Y12779	32168	-	AB527320 AF195192 AY358752 NM_022122	112568	-	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	131766	-	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	0.0	
chr11	68870665	68870766	reg1000068.p3	4.372	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-13189	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-54289	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-54365	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	190907	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	585141	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	585195	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.0	
chr1	212662093	212662181	reg1025004.p1	4.372	+	TSC_hg19_v1_chr1_+_212606264 AF173937 NM_013349 AK074431 AK223135 AY762102 BC008823 AB126219 AF049672	-55825	+	TSC_hg19_v1_chr1_-_212588248 AK297200 NM_001198862 AK024066 NM_018252	-73885	-	TSC_hg19_v1_chr1_-_212588235 AK001736	-73902	-	NM_001030287	76538	+	NM_001040619 NM_001206484 NM_001206488 NM_001674 TSC_hg19_v1_chr1_+_212782102 AK294296	119898	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	119970	+	AF173937|NENF|29937|neudesin neurotrophic factor##NM_013349|NENF|29937|neudesin neurotrophic factor##AK074431|NENF|29937|neudesin neurotrophic factor##AK223135|NENF|29937|neudesin neurotrophic factor##AY762102|NENF|29937|neudesin neurotrophic factor##BC008823|NENF|29937|neudesin neurotrophic factor##AB126219|NENF|29937|neudesin neurotrophic factor##AF049672|NENF|29937|neudesin neurotrophic factor##AK297200|TMEM206|55248|transmembrane protein 206##NM_001198862|TMEM206|55248|transmembrane protein 206##AK024066|TMEM206|55248|transmembrane protein 206##NM_018252|TMEM206|55248|transmembrane protein 206##AK001736|TMEM206|55248|transmembrane protein 206##NM_001030287|ATF3|467|activating transcription factor 3##NM_001040619|ATF3|467|activating transcription factor 3##NM_001206484|ATF3|467|activating transcription factor 3##NM_001206488|ATF3|467|activating transcription factor 3##NM_001674|ATF3|467|activating transcription factor 3##AK294296|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3	0.0	
chr12	66357000	66357095	reg1029248.p1	4.372	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	-138034	+	TSC_hg19_v1_chr12_+_66218605 AK311399	-138440	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	-138840	+	TSC_hg19_v1_chr12_-_66524536 BC070232 BC006002 BC107780 AK091568 AX747065 NM_032338	167478	-	AB464309 TSC_hg19_v1_chr12_-_66563773 AF182414 AF161526 BC020613 AF113127 AK301359 AF182041 AK075069 AK225158 BC070366 BC052273 BC094852	206707	-	TSC_hg19_v1_chr12_-_66563806 BC004401 NM_016056	206755	-	AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##BC070232|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC006002|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##BC107780|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AK091568|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##NM_032338|LLPH|84298|LLP homolog, long-term synaptic facilitation (Aplysia)##AF182414|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF161526|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC020613|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF113127|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AF182041|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK075069|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##AK225158|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC070366|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC052273|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC094852|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##BC004401|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4##NM_016056|TMBIM4|51643|transmembrane BAX inhibitor motif containing 4	0.0	
chr14	79477611	79477687	reg1024510.p2	4.372	+	AB018286 BC152457 NM_004796	-607557	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-1211199	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-1250140	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	268055	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	1200255	-	AK292210 NM_000793	1219747	-	AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	0.988034	CTCF.p2:11:0.988
chr14	92359402	92359512	reg1030747.p2	4.372	+	AK093876 AX748346 NM_001128596 TSC_hg19_v1_chr14_-_92333881	-25589	-	TSC_hg19_v1_chr14_-_92302762 BC040503 BX647828 AK126359 NM_001128595 NM_152332	-56665	-	BC126214 BC126216 AK126034 NM_024764	-161060	-	AF112152 AF093118 BX248290 BC022280 TSC_hg19_v1_chr14_-_92413757 AK075147	54317	-	TSC_hg19_v1_chr14_-_92414010 AY358898 NM_006329	54567	-	BC146845 AF007217 BC002656 BC069008 TSC_hg19_v1_chr14_-_92506382 Y12490 BC142956 AK307489 NM_004239	146893	-	AK093876|TC2N|123036|tandem C2 domains, nuclear##NM_001128596|TC2N|123036|tandem C2 domains, nuclear##BC040503|TC2N|123036|tandem C2 domains, nuclear##BX647828|TC2N|123036|tandem C2 domains, nuclear##AK126359|TC2N|123036|tandem C2 domains, nuclear##NM_001128595|TC2N|123036|tandem C2 domains, nuclear##NM_152332|TC2N|123036|tandem C2 domains, nuclear##BC126214|CATSPERB|79820|cation channel, sperm-associated, beta##BC126216|CATSPERB|79820|cation channel, sperm-associated, beta##AK126034|CATSPERB|79820|cation channel, sperm-associated, beta##NM_024764|CATSPERB|79820|cation channel, sperm-associated, beta##AF112152|FBLN5|10516|fibulin 5##AF093118|FBLN5|10516|fibulin 5##BX248290|FBLN5|10516|fibulin 5##BC022280|FBLN5|10516|fibulin 5##AK075147|FBLN5|10516|fibulin 5##AY358898|FBLN5|10516|fibulin 5##NM_006329|FBLN5|10516|fibulin 5##BC146845|TRIP11|9321|thyroid hormone receptor interactor 11##AF007217|TRIP11|9321|thyroid hormone receptor interactor 11##BC002656|TRIP11|9321|thyroid hormone receptor interactor 11##BC069008|TRIP11|9321|thyroid hormone receptor interactor 11##Y12490|TRIP11|9321|thyroid hormone receptor interactor 11##AK307489|TRIP11|9321|thyroid hormone receptor interactor 11##NM_004239|TRIP11|9321|thyroid hormone receptor interactor 11	0.0	
chr1	9350414	9350594	reg1033893.p1	4.372	+	CR749282 TSC_hg19_v1_chr1_+_9299950	-50566	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	-55587	+	TSC_hg19_v1_chr1_+_9294832 BC081559	-55689	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	2433	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	2465	+	TSC_hg19_v1_chr1_+_9415945 CU677397	65442	+	CR749282|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1	0.019378	
chr2	217139121	217139268	reg1033008.p2	4.372	+	TSC_hg19_v1_chr2_+_216986829 AK026166	-152327	+	TSC_hg19_v1_chr2_+_216974124 J04977 M30938 AK290740 BC095442 BC019027 AB489155 CU676354 DQ892660 DQ895925	-165055	+	TSC_hg19_v1_chr2_+_216974112 AK222603	-165085	+	TSC_hg19_v1_chr2_-_217236666 AB037820 NM_020814	97513	-	NM_014140 TSC_hg19_v1_chr2_+_217277188 AK023780	138004	+	TSC_hg19_v1_chr2_+_217277487 NM_001127207 AF432223 BC043341	138284	+	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##J04977|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##M30938|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK290740|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC095442|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC019027|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ892660|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ895925|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK222603|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AB037820|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_020814|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_014140|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AK023780|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##NM_001127207|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AF432223|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##BC043341|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	0.709389	CTCF.p2:31:0.709
chr2	225987569	225987729	reg1009012.p1	4.372	+	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	-80301	-	TSC_hg19_v1_chr2_-_225811768 EU236710	-175895	-	TSC_hg19_v1_chr2_-_225450116 NM_003590	-537529	-	NM_020864 BC131727 AB040919	277996	+	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	1675830	-	TSC_hg19_v1_chr2_-_227664534 S62539	1676850	-	AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##EU236710|DOCK10|55619|dedicator of cytokinesis 10##NM_003590|CUL3|8452|cullin 3##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##S62539|IRS1|3667|insulin receptor substrate 1	0.0	
chr4	120134239	120134365	reg1030968.p2	4.372	+	TSC_hg19_v1_chr4_+_120133867 BC062741 NM_019050 CR749490	-462	+	TSC_hg19_v1_chr4_+_120133742 BX648836	-559	+	NM_016599 AJ252149 AK313856 AY013295 BC017402 BC020932 BC005195	-77300	+	TSC_hg19_v1_chr4_-_120221773 AK025703 AF075061 BC017399 NM_001001701	87532	-	AY605045 NM_001170330	91297	-	CU686944 AK025079 BC069617 BC069466 BC069625 BC069637 BC111791 NM_000134	108984	-	BC062741|USP53|54532|ubiquitin specific peptidase 53##NM_019050|USP53|54532|ubiquitin specific peptidase 53##CR749490|USP53|54532|ubiquitin specific peptidase 53##NM_016599|MYOZ2|51778|myozenin 2##AJ252149|MYOZ2|51778|myozenin 2##AK313856|MYOZ2|51778|myozenin 2##AY013295|MYOZ2|51778|myozenin 2##BC017402|MYOZ2|51778|myozenin 2##BC020932|MYOZ2|51778|myozenin 2##BC005195|MYOZ2|51778|myozenin 2##AK025703|C4orf3|401152|chromosome 4 open reading frame 3##AF075061|C4orf3|401152|chromosome 4 open reading frame 3##BC017399|C4orf3|401152|chromosome 4 open reading frame 3##NM_001001701|C4orf3|401152|chromosome 4 open reading frame 3##AY605045|C4orf3|401152|chromosome 4 open reading frame 3##NM_001170330|C4orf3|401152|chromosome 4 open reading frame 3##AK025079|FABP2|2169|fatty acid binding protein 2, intestinal##BC069617|FABP2|2169|fatty acid binding protein 2, intestinal##BC069466|FABP2|2169|fatty acid binding protein 2, intestinal##BC069625|FABP2|2169|fatty acid binding protein 2, intestinal##BC069637|FABP2|2169|fatty acid binding protein 2, intestinal##BC111791|FABP2|2169|fatty acid binding protein 2, intestinal##NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal	0.040244	
chr6	229409	229536	reg1023649.p2	4.372	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	62613	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	63025	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	162292	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.0	
chr1	203252195	203252288	reg1033053.p2	4.371	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-53426	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-96315	-	BC008568 TSC_hg19_v1_chr1_-_203155877 AK312911	-96353	-	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	22448	+	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	65143	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	67968	-	U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.300143	CTCF.p2:-107:0.300
chr13	74423567	74423658	reg1029235.p1	4.371	+	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-790408	+	TSC_hg19_v1_chr13_+_73356270 NM_006346 AK309828 BC006009 BC008432 BC041806 BC051911 AY370776 AY375528	-1067302	+	BC056143 TSC_hg19_v1_chr13_-_73356083 AK314715 BC038101 NM_001128226 NM_014953	-1067406	-	AF161471 AF113122 NM_007249	284377	-	TSC_hg19_v1_chr13_-_74708425 AK291397	284784	-	CR749622 TSC_hg19_v1_chr13_-_75901948	1478310	-	AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_006346|PIBF1|10464|progesterone immunomodulatory binding factor 1##AK309828|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC006009|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC008432|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC041806|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC051911|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY370776|PIBF1|10464|progesterone immunomodulatory binding factor 1##AY375528|PIBF1|10464|progesterone immunomodulatory binding factor 1##BC056143|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AK314715|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##BC038101|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_001128226|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##NM_014953|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK291397|KLF12|11278|Kruppel-like factor 12##CR749622|TBC1D4|9882|TBC1 domain family, member 4	0.987957	CTCF.p2:0:0.988
chr13	75990968	75991054	reg1029690.p1	4.371	+	CR749622 TSC_hg19_v1_chr13_-_75901948	-89089	-	TSC_hg19_v1_chr13_-_74708425 AK291397	-1282615	-	AF161471 AF113122 NM_007249	-1283022	-	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	65327	-	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	120967	-	TSC_hg19_v1_chr13_+_76123890 AK313665 BC018125 NM_006002 M30496 CU676190 BT019359 CR456855	132913	+	CR749622|TBC1D4|9882|TBC1 domain family, member 4##AK291397|KLF12|11278|Kruppel-like factor 12##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6##AK313665|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BC018125|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_006002|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##M30496|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BT019359|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##CR456855|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)	0.821482	CTCF.p2:33:0.703
chr18	72064915	72065038	reg1030988.p2	4.371	+	CR749350 NM_001174123	-81867	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	-105797	-	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	-249182	+	TSC_hg19_v1_chr18_-_72124545 NM_001044369	59553	-	TSC_hg19_v1_chr18_+_72163567 NM_018235	98482	+	TSC_hg19_v1_chr18_+_72163611 AK001692 AK300904 AK298309 BC001375	98639	+	CR749350|C18orf63|644041|chromosome 18 open reading frame 63##NM_001174123|C18orf63|644041|chromosome 18 open reading frame 63##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##NM_001044369|FAM69C|125704|family with sequence similarity 69, member C##NM_018235|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK001692|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK300904|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##AK298309|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)##BC001375|CNDP2|55748|CNDP dipeptidase 2 (metallopeptidase M20 family)	0.0	
chr19	30713422	30713548	reg1037346.p1	4.371	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	-280203	+	BC026184 NM_001252641	-298935	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	-410584	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	149895	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	1126862	-	FJ211597 NM_001205273	1369701	+	NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5	0.067517	
chr19	4007307	4007467	reg1033196.p1	4.371	+	AK297398 AK298498 NM_001961 TSC_hg19_v1_chr19_-_3985462	-21925	-	TSC_hg19_v1_chr19_-_3985455 BC126259 BC136313 BC068002 BC006547 AK299225	-21986	-	TSC_hg19_v1_chr19_-_3984195 AB527843 AY942181 HQ258667 X51466 Z11692	-23136	-	TSC_hg19_v1_chr19_+_4007733 BC066895 AK022481 BC029874 NM_015897 AK222726 AB464092 AF077952 DQ892419 DQ895633 BC010047	342	+	TSC_hg19_v1_chr19_-_4065504 BC084568	58109	-	BC113511 TSC_hg19_v1_chr19_-_4066828 AF000561 NM_015898 BC064505	59430	-	AK297398|EEF2|1938|eukaryotic translation elongation factor 2##AK298498|EEF2|1938|eukaryotic translation elongation factor 2##NM_001961|EEF2|1938|eukaryotic translation elongation factor 2##BC126259|EEF2|1938|eukaryotic translation elongation factor 2##BC136313|EEF2|1938|eukaryotic translation elongation factor 2##BC006547|EEF2|1938|eukaryotic translation elongation factor 2##AK299225|EEF2|1938|eukaryotic translation elongation factor 2##AY942181|EEF2|1938|eukaryotic translation elongation factor 2##HQ258667|EEF2|1938|eukaryotic translation elongation factor 2##X51466|EEF2|1938|eukaryotic translation elongation factor 2##Z11692|EEF2|1938|eukaryotic translation elongation factor 2##BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4##AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4##BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4##NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4##AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4##AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4##DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4##DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4##BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4##BC084568|ZBTB7A|51341|zinc finger and BTB domain containing 7A##BC113511|ZBTB7A|51341|zinc finger and BTB domain containing 7A##AF000561|ZBTB7A|51341|zinc finger and BTB domain containing 7A##NM_015898|ZBTB7A|51341|zinc finger and BTB domain containing 7A	0.0	
chr10	112185776	112185953	reg1028662.p2	4.370	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-121164	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-121271	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-200043	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	71887	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	141628	+	AF067163 TSC_hg19_v1_chr10_+_112344155	158251	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.100848	
chr14	75965532	75965712	reg1025315.p1	4.370	+	BC051303 NM_001135049	-66786	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	-70609	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	-70981	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	23168	+	TSC_hg19_v1_chr14_+_75988840 D42106	23230	+	NM_017791 AY260572 AY260577 BC019087 AK000378	79343	+	BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	0.0	
chr17	25804364	25804529	reg1029900.p1	4.370	+	BC035488 BC042106 NM_014238	-5417	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-183165	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-183324	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	153722	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	153757	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	153782	+	BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.059772	
chr17	37309364	37309517	reg1004543.p2	4.370	+	TSC_hg19_v1_chr17_-_37307891 NM_020405	-1545	-	TSC_hg19_v1_chr17_-_37307863 BC036059	-1593	-	EU832116 EU832210 AK312999 TSC_hg19_v1_chr17_-_37307740 AF279144 AF378753 AY704670 AY704671	-1708	-	TSC_hg19_v1_chr17_+_37321318 AK093715	11881	+	NM_001143968	12973	-	TSC_hg19_v1_chr17_-_37350083 AB209176	40653	-	NM_020405|PLXDC1|57125|plexin domain containing 1##BC036059|PLXDC1|57125|plexin domain containing 1##EU832116|PLXDC1|57125|plexin domain containing 1##EU832210|PLXDC1|57125|plexin domain containing 1##AK312999|PLXDC1|57125|plexin domain containing 1##AF279144|PLXDC1|57125|plexin domain containing 1##AF378753|PLXDC1|57125|plexin domain containing 1##AY704670|PLXDC1|57125|plexin domain containing 1##AY704671|PLXDC1|57125|plexin domain containing 1##AK093715|LOC284108|284108|uncharacterized LOC284108##NM_001143968|ARL5C|390790|ADP-ribosylation factor-like 5C##AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit	0.0	
chr20	49242762	49242885	reg1029317.p2	4.370	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	-115818	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-115891	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-115904	+	AK056792 NM_080829	10602	-	TSC_hg19_v1_chr20_-_49308074 AK124347	65254	-	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	105246	+	BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	0.929151	CTCF.p2:-23:0.912
chr2	130571069	130571184	reg1023177.p1	4.370	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-1494826	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-1643079	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-1722265	+	NM_032144 AL136727	166109	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	315732	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	331485	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.148967	
chr2	45871111	45871291	reg1001724.p2	4.370	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-32794	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-76073	-	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	-634651	-	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	7873	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	653390	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	653774	+	AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1	0.0	
chr3	134956289	134956425	reg1029529.p1	4.370	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-442056	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-442206	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-586512	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	728174	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	728263	+	NM_181897 AK316258 L12146	785261	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.0	
chr3	35965711	35965809	reg1032885.p1	4.370	+	BC017805 NM_198399 BC066651 BC036548	-243301	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	-244564	+	BC051828 NM_016300	-281912	+	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	456292	+	NM_033403	815591	-	TSC_hg19_v1_chr3_-_36986546 NM_014831	1020810	-	BC017805|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_198399|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC066651|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC036548|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain##NM_033403|DCLK3|85443|doublecortin-like kinase 3##NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1	0.729873	CTCF.p2:13:0.730
chr5	172134340	172134438	reg1031881.p2	4.370	+	AF275799 TSC_hg19_v1_chr5_-_172083715	-50746	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-66136	+	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	-252886	-	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	63822	-	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	126929	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	252059	+	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1	0.996098	CTCF.p2:-14:0.996
chr7	100738213	100738332	reg1032231.p1	4.370	+	BC005847 TSC_hg19_v1_chr7_+_100728767 AK092927 AX747810 BC048194 NM_030961 BC011882	-9512	+	TSC_hg19_v1_chr7_+_100663360 AJ606307 AJ606308 NM_001040105	-74907	+	NM_001164462	-125369	+	NM_000602 NM_001165413 TSC_hg19_v1_chr7_+_100770384 AK293248 AK297728 AK298048 AK316225 BC020765 X04729 BC010860 X04429 X12701 BC005927 M16006	32142	+	NM_001283 TSC_hg19_v1_chr7_+_100797756 AK312151 BC003561 AB015319	59456	+	BC063835 BC044212 TSC_hg19_v1_chr7_-_100808851 AK225839 NM_003378 BC036537	70580	-	BC005847|TRIM56|81844|tripartite motif containing 56##BC048194|TRIM56|81844|tripartite motif containing 56##NM_030961|TRIM56|81844|tripartite motif containing 56##BC011882|TRIM56|81844|tripartite motif containing 56##AJ606307|MUC17|140453|mucin 17, cell surface associated##AJ606308|MUC17|140453|mucin 17, cell surface associated##NM_001040105|MUC17|140453|mucin 17, cell surface associated##NM_001164462|MUC12|10071|mucin 12, cell surface associated##NM_000602|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001165413|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK293248|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK297728|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK298048|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK316225|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC020765|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04729|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC010860|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04429|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X12701|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC005927|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##M16006|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001283|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AK312151|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC003561|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AB015319|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC063835|VGF|7425|VGF nerve growth factor inducible##BC044212|VGF|7425|VGF nerve growth factor inducible##AK225839|VGF|7425|VGF nerve growth factor inducible##NM_003378|VGF|7425|VGF nerve growth factor inducible##BC036537|VGF|7425|VGF nerve growth factor inducible	0.998788	CTCF.p2:22:0.999
chr10	64252075	64252182	reg1003490.p2	4.369	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-118085	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-223589	-	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	-443032	+	AJ505150 NM_199452	28078	+	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	312414	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	312529	+	NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase	0.0	
chr14	72399086	72399190	reg1023557.p2	4.369	+	AK294895 NM_001204423	-322	+	AF090989 AF090990 NM_015556	-403097	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-1024687	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	15	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	728	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	961670	-	AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3	0.0	
chr17	25853763	25853912	reg1028338.p1	4.369	+	BC035488 BC042106 NM_014238	-54808	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-232556	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-232715	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	104331	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	104366	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	104391	+	BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.019502	
chr17	36918053	36918156	reg1032199.p1	4.369	+	TSC_hg19_v1_chr17_+_36909011 NM_002795 BC013008 BC002570 D26598	-9074	+	TSC_hg19_v1_chr17_-_36906030 BX647429	-12055	-	TSC_hg19_v1_chr17_-_36904564 BC024255 NM_007144	-13537	-	BT019614 AB529089 CU693266 TSC_hg19_v1_chr17_-_36955807 BC027459	37684	-	TSC_hg19_v1_chr17_-_36956177 NM_003559 U85245	38078	-	TSC_hg19_v1_chr17_-_36981408 AB587360 BC003085	63326	-	NM_002795|PSMB3|5691|proteasome (prosome, macropain) subunit, beta type, 3##BC013008|PSMB3|5691|proteasome (prosome, macropain) subunit, beta type, 3##D26598|PSMB3|5691|proteasome (prosome, macropain) subunit, beta type, 3##BX647429|PCGF2|7703|polycomb group ring finger 2##BC024255|PCGF2|7703|polycomb group ring finger 2##NM_007144|PCGF2|7703|polycomb group ring finger 2##BT019614|PIP4K2B|8396|phosphatidylinositol-5-phosphate 4-kinase, type II, beta##BC027459|PIP4K2B|8396|phosphatidylinositol-5-phosphate 4-kinase, type II, beta##NM_003559|PIP4K2B|8396|phosphatidylinositol-5-phosphate 4-kinase, type II, beta##U85245|PIP4K2B|8396|phosphatidylinositol-5-phosphate 4-kinase, type II, beta##BC003085|CWC25|54883|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	0.722684	CTCF.p2:-21:0.723
chr17	78865488	78865669	reg1025076.p1	4.369	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-346760	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-346929	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-415251	-	TSC_hg19_v1_chr17_+_78935064 BC073898	69554	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	100063	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	100116	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.0	
chr18	44810004	44810108	reg1031530.p1	4.369	+	TSC_hg19_v1_chr18_-_44702736 NM_016097	-107306	-	TSC_hg19_v1_chr18_-_44702734 AK027108	-107323	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	-107367	-	BC014840 NM_005901	646869	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	647159	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	647433	-	NM_016097|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2	0.984958	CTCF.p2:4:0.985
chr18	56889712	56889821	reg1029718.p2	4.369	+	TSC_hg19_v1_chr18_+_56887389 AK307264 BC004488 NM_001012512 NM_001012513 NM_002091 K02054 DQ893451 DQ896223 AB528662 AB102889 BT006803	-2323	+	TSC_hg19_v1_chr18_+_56807119 AK314107 AF212233 AK311213 NM_033280 AK295346 AK307127 BC009703 CU679449	-82619	+	TSC_hg19_v1_chr18_+_56531281 BC036366	-358417	+	BC051901 AF115392 NM_013435 AB593018	50888	-	EU831768 EU831846 AY286502 BC065562 BX640655 AB593158 BX648518 BC106887 BC106888 AK123184 NM_181654	96020	-	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	136720	-	AK307264|GRP|2922|gastrin-releasing peptide##BC004488|GRP|2922|gastrin-releasing peptide##NM_001012512|GRP|2922|gastrin-releasing peptide##NM_001012513|GRP|2922|gastrin-releasing peptide##NM_002091|GRP|2922|gastrin-releasing peptide##K02054|GRP|2922|gastrin-releasing peptide##DQ893451|GRP|2922|gastrin-releasing peptide##DQ896223|GRP|2922|gastrin-releasing peptide##AB102889|GRP|2922|gastrin-releasing peptide##BT006803|GRP|2922|gastrin-releasing peptide##AK314107|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AF212233|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##NM_033280|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK295346|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307127|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##BC009703|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##BC036366|ZNF532|55205|zinc finger protein 532##BC051901|RAX|30062|retina and anterior neural fold homeobox##AF115392|RAX|30062|retina and anterior neural fold homeobox##NM_013435|RAX|30062|retina and anterior neural fold homeobox##AB593018|RAX|30062|retina and anterior neural fold homeobox##EU831768|CPLX4|339302|complexin 4##EU831846|CPLX4|339302|complexin 4##AY286502|CPLX4|339302|complexin 4##BC065562|CPLX4|339302|complexin 4##BX640655|CPLX4|339302|complexin 4##AB593158|CPLX4|339302|complexin 4##BX648518|CPLX4|339302|complexin 4##BC106887|CPLX4|339302|complexin 4##BC106888|CPLX4|339302|complexin 4##AK123184|CPLX4|339302|complexin 4##NM_181654|CPLX4|339302|complexin 4##DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1	0.0	
chr18	72265640	72265820	reg1032751.p1	4.369	+	TSC_hg19_v1_chr18_+_72265126 AK056288	-599	+	TSC_hg19_v1_chr18_-_72265072 BC036588	-670	-	TSC_hg19_v1_chr18_-_72264818 AK001853 BC132930 BC132956	-889	-	NM_001146189 NM_001146190 NM_017757	77188	+	TSC_hg19_v1_chr18_-_72920993 CU687330 CU689738	655271	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	655382	-	AK056288|ZNF407|55628|zinc finger protein 407##BC036588|LOC400657|400657|uncharacterized LOC400657##AK001853|LOC400657|400657|uncharacterized LOC400657##BC132930|LOC400657|400657|uncharacterized LOC400657##BC132956|LOC400657|400657|uncharacterized LOC400657##NM_001146189|ZNF407|55628|zinc finger protein 407##NM_001146190|ZNF407|55628|zinc finger protein 407##NM_017757|ZNF407|55628|zinc finger protein 407##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	0.0	
chr19	41633791	41633955	reg1033141.p1	4.369	+	AK296884 AK298082 AK316498 J02906 NM_000774 BC109057 BC109056	-13526	+	NM_000766 AB527127 AF209774 AY513604 AY513605 AY513606 AY513607 AY513608 AY513609	-39502	+	TSC_hg19_v1_chr19_+_41515553 X06399	-118335	+	TSC_hg19_v1_chr19_+_41699123 AK027605 NM_030622 AY358603	65231	+	TSC_hg19_v1_chr19_+_41699143 AK296087 BC033691 AF335278 CU689700 DQ893363 DQ896681	65290	+	TSC_hg19_v1_chr19_+_41725118 NM_001699 NM_021913	91238	+	AK298082|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##AK316498|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##J02906|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##NM_000774|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##BC109057|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##BC109056|CYP2F1|1572|cytochrome P450, family 2, subfamily F, polypeptide 1##NM_000766|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AF209774|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513604|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513605|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513606|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513607|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513608|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##AY513609|CYP2A13|1553|cytochrome P450, family 2, subfamily A, polypeptide 13##X06399|CYP2B6|1555|cytochrome P450, family 2, subfamily B, polypeptide 6##AK027605|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##NM_030622|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AY358603|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AK296087|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##BC033691|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##AF335278|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##DQ893363|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##DQ896681|CYP2S1|29785|cytochrome P450, family 2, subfamily S, polypeptide 1##NM_001699|AXL|558|AXL receptor tyrosine kinase##NM_021913|AXL|558|AXL receptor tyrosine kinase	0.0	
chrX	134847026	134847201	reg1035665.p1	4.369	+	TSC_hg19_v1_chrX_+_134654737 BC140715 AK308423	-192382	+	TSC_hg19_v1_chrX_+_134654584 BX648113 NM_182540 AK096544 AL833319	-192544	+	BC030620 TSC_hg19_v1_chrX_+_134555878 BC051704	-291239	+	AY743709 NM_001017417 BC140735 BC140926 BC144437 BC140913	121	+	AK098689 AY743710 AY743712 NM_001017436 NM_152582 BC028711 BC140735 BC140926 BC144437	19146	+	AY743711 NM_001017435 BC028711 BC140735 BC140926 BC144437	36420	+	BC140715|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK308423|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BX648113|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##NM_182540|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK096544|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AL833319|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BC030620|LINC00086|399668|long intergenic non-protein coding RNA 86##BC051704|LINC00086|399668|long intergenic non-protein coding RNA 86##AY743709|CT45A1|541466|cancer/testis antigen family 45, member A1##NM_001017417|CT45A1|541466|cancer/testis antigen family 45, member A1##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1##AK098689|CT45A4|441520|cancer/testis antigen family 45, member A4##AY743710|CT45A2|728911|cancer/testis antigen family 45, member A2##AY743712|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_001017436|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_152582|CT45A2|728911|cancer/testis antigen family 45, member A2##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##AY743711|CT45A3|441519|cancer/testis antigen family 45, member A3##NM_001017435|CT45A3|441519|cancer/testis antigen family 45, member A3##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3	1.360136	CTCF.p2:-22:0.996	CTCF.p2:60:0.364
chr14	53684318	53684445	reg1028435.p1	4.368	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-64331	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-64413	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-64508	-	NM_130851	736888	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	739152	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	1179340	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.0	
chr16	70438364	70438514	reg1027742.p2	4.368	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-57611	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-105291	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-105363	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	34542	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	50060	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	64401	+	AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##AK096727|FUK|197258|fucokinase	0.0	
chr19	38397474	38397612	reg1028161.p2	4.368	+	AK302913 AY026504 AK128826 NM_031951	-269	-	TSC_hg19_v1_chr19_+_38308124 AK092337	-89404	+	TSC_hg19_v1_chr19_+_38307973 AK309685	-89534	+	TSC_hg19_v1_chr19_+_38397847 NM_015073	314	+	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	369	+	AB463560 GQ358728 BC125152 BC125153 U43843 AK308563 NM_001135155 NM_004647	317292	-	AK302913|WDR87|83889|WD repeat domain 87##AY026504|WDR87|83889|WD repeat domain 87##AK128826|WDR87|83889|WD repeat domain 87##NM_031951|WDR87|83889|WD repeat domain 87##AK092337|LOC644554|644554|uncharacterized LOC644554##AK309685|LOC644554|644554|uncharacterized LOC644554##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##GQ358728|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125152|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125153|DPF1|8193|D4, zinc and double PHD fingers family 1##U43843|DPF1|8193|D4, zinc and double PHD fingers family 1##AK308563|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135155|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_004647|DPF1|8193|D4, zinc and double PHD fingers family 1	0.0	
chr3	124369731	124369911	reg1031783.p1	4.368	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	-66293	+	TSC_hg19_v1_chr3_+_124103674 AK131379	-266198	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-556216	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	79418	+	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	79495	+	TSC_hg19_v1_chr3_-_124605863 AB587397 DQ892778 DQ896025 M35011 AK315429 J05633	236045	-	NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##AK131379|KALRN|8997|kalirin, RhoGEF kinase##AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase##AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase##DQ892778|ITGB5|3693|integrin, beta 5##DQ896025|ITGB5|3693|integrin, beta 5##M35011|ITGB5|3693|integrin, beta 5##AK315429|ITGB5|3693|integrin, beta 5##J05633|ITGB5|3693|integrin, beta 5	0.0	
chr3	87949360	87949466	reg1020989.p1	4.368	+	AB587506 L18781 X72215 X62429 D10216 NM_000306 NM_001122757	-623740	-	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	-672878	+	BC094780 TSC_hg19_v1_chr3_-_87040272	-909143	-	NM_000866	82312	+	BC052980 TSC_hg19_v1_chr3_-_88108150 AL117392 NM_001008390 NM_003663	158730	-	AF543494 NM_018293	238848	+	L18781|POU1F1|5449|POU class 1 homeobox 1##X72215|POU1F1|5449|POU class 1 homeobox 1##X62429|POU1F1|5449|POU class 1 homeobox 1##D10216|POU1F1|5449|POU class 1 homeobox 1##NM_000306|POU1F1|5449|POU class 1 homeobox 1##NM_001122757|POU1F1|5449|POU class 1 homeobox 1##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_000866|HTR1F|3355|5-hydroxytryptamine (serotonin) receptor 1F##BC052980|CGGBP1|8545|CGG triplet repeat binding protein 1##AL117392|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_001008390|CGGBP1|8545|CGG triplet repeat binding protein 1##NM_003663|CGGBP1|8545|CGG triplet repeat binding protein 1##AF543494|ZNF654|55279|zinc finger protein 654##NM_018293|ZNF654|55279|zinc finger protein 654	0.875216	CTCF.p2:-7:0.875
chr7	101950708	101950888	reg1022706.p2	4.368	+	TSC_hg19_v1_chr7_+_101928431 AB000520	-22355	+	TSC_hg19_v1_chr7_+_101928390 NM_020979	-22401	+	M74099 NM_181552	-489917	+	NM_001146210	46090	-	TSC_hg19_v1_chr7_+_102004329 NM_001242713 BC063572 AK098276	53513	+	TSC_hg19_v1_chr7_+_102004338 BC048257 BC066362	53554	+	AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_020979|SH2B2|10603|SH2B adaptor protein 2##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)##NM_001242713|LOC100289561|100289561|uncharacterized LOC100289561##BC063572|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough##AK098276|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough	0.0	
chr7	30576739	30576822	reg1031063.p2	4.368	+	CU674304 TSC_hg19_v1_chr7_-_30544445 BC013937 BC005356 AK315608 BC019243 BC000625 NM_001199815 NM_001199816 NM_001199817 NM_024051	-32379	-	AY128682 AY128683 AY128684 AY128685 AY128686 AF113925 BC040339 AK300367 AK023969 NM_006092	-58459	-	TSC_hg19_v1_chr7_+_30324634 AY054122	-252124	+	NM_002047	57400	+	TSC_hg19_v1_chr7_-_30634379 AK096687	57592	-	TSC_hg19_v1_chr7_+_30634447 AK074524 AK295490 BC007722 AK310351 BC000065 D30658 BC007755 AB528358 DQ892773 DQ896021 U09587	57726	+	BC013937|GGCT|79017|gamma-glutamylcyclotransferase##BC005356|GGCT|79017|gamma-glutamylcyclotransferase##AK315608|GGCT|79017|gamma-glutamylcyclotransferase##BC019243|GGCT|79017|gamma-glutamylcyclotransferase##BC000625|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199815|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199816|GGCT|79017|gamma-glutamylcyclotransferase##NM_001199817|GGCT|79017|gamma-glutamylcyclotransferase##NM_024051|GGCT|79017|gamma-glutamylcyclotransferase##AY128682|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128683|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128684|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128685|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY128686|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AF113925|NOD1|10392|nucleotide-binding oligomerization domain containing 1##BC040339|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK300367|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AK023969|NOD1|10392|nucleotide-binding oligomerization domain containing 1##NM_006092|NOD1|10392|nucleotide-binding oligomerization domain containing 1##AY054122|ZNRF2|223082|zinc and ring finger 2##NM_002047|GARS|2617|glycyl-tRNA synthetase##AK096687|LOC401320|401320|uncharacterized LOC401320##AK074524|GARS|2617|glycyl-tRNA synthetase##AK295490|GARS|2617|glycyl-tRNA synthetase##BC007722|GARS|2617|glycyl-tRNA synthetase##AK310351|GARS|2617|glycyl-tRNA synthetase##BC000065|GARS|2617|glycyl-tRNA synthetase##D30658|GARS|2617|glycyl-tRNA synthetase##BC007755|GARS|2617|glycyl-tRNA synthetase##DQ892773|GARS|2617|glycyl-tRNA synthetase##DQ896021|GARS|2617|glycyl-tRNA synthetase##U09587|GARS|2617|glycyl-tRNA synthetase	0.391692	CTCF.p2:-17:0.392
chr8	22526694	22526874	reg1030038.p1	4.368	+	TSC_hg19_v1_chr8_-_22526609 BC009824 AK023980 AF271732 AK001289 AK222470 NM_018688	-164	-	TSC_hg19_v1_chr8_+_22462537 NM_021174 AL834162 AL834351 AL834352	-64243	+	BC065495 TSC_hg19_v1_chr8_+_22462287 AK095712	-64474	+	AK295134 NM_001199880	23117	-	AK294968 AK295834 NM_001199881	23290	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	23721	-	BC009824|BIN3|55909|bridging integrator 3##AK023980|BIN3|55909|bridging integrator 3##AF271732|BIN3|55909|bridging integrator 3##AK001289|BIN3|55909|bridging integrator 3##AK222470|BIN3|55909|bridging integrator 3##NM_018688|BIN3|55909|bridging integrator 3##NM_021174|KIAA1967|57805|KIAA1967##AL834162|KIAA1967|57805|KIAA1967##AL834351|KIAA1967|57805|KIAA1967##AL834352|KIAA1967|57805|KIAA1967##BC065495|KIAA1967|57805|KIAA1967##AK095712|KIAA1967|57805|KIAA1967##AK295134|EGR3|1960|early growth response 3##NM_001199880|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3	0.0	
chr9	108453165	108453302	reg1029734.p1	4.368	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	-28476	+	TSC_hg19_v1_chr9_+_108320420 NM_001079802 NM_001198963 NM_006731 AK300840 AK304460 BC058842 AB008226 AB609007	-132810	+	AK309817 TSC_hg19_v1_chr9_+_108210342 NM_001145313 NM_031919 NM_207647 AF088031 AK299350 AK296433 AK299491 AF316830	-242970	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	3620	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	3685	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	1172131	+	BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_001079802|FKTN|2218|fukutin##NM_001198963|FKTN|2218|fukutin##NM_006731|FKTN|2218|fukutin##AK300840|FKTN|2218|fukutin##AK304460|FKTN|2218|fukutin##BC058842|FKTN|2218|fukutin##AB008226|FKTN|2218|fukutin##AK309817|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001145313|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_031919|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_207647|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF088031|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299350|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK296433|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299491|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF316830|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462	0.0	
chr10	6312439	6312605	reg1030692.p1	4.367	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-67646	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-125610	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-125638	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	309739	-	TSC_hg19_v1_chr10_+_6622460 AY007155	309958	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	1138728	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.0	
chr17	70143565	70143674	reg1036749.p1	4.367	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-26379	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-26449	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-26460	+	AK000477 TSC_hg19_v1_chr17_-_70588944	445324	-	AF331643 TSC_hg19_v1_chr17_-_71088816	945197	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	945204	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr19	10215491	10215647	reg1023293.p1	4.367	+	AY358276 BC142632 AB054064 NM_031917 AF230330	-2169	-	TSC_hg19_v1_chr19_+_10197045 AL137694 CU690214	-18507	+	BC026180 TSC_hg19_v1_chr19_+_10197007 AK002148 BC010847 BC035817	-18572	+	BC171852 NM_001040664 NM_001198690 NM_020230 BC033202 TSC_hg19_v1_chr19_+_10217035 BC009833 AJ292529 CU679511 AJ300588	1420	+	NM_002566 BC073827	6635	+	AB528489 BT006889 CR457134 CU678971 DQ890616 DQ896801 AF020833 U96074 TSC_hg19_v1_chr19_-_10230579 AK293374 AF094850 AK309944 AK316040 AK291320 BC000733 BC008469 AK316335 AK315896 AK296377 AK311624 NM_003755	14997	-	AY358276|ANGPTL6|83854|angiopoietin-like 6##BC142632|ANGPTL6|83854|angiopoietin-like 6##AB054064|ANGPTL6|83854|angiopoietin-like 6##NM_031917|ANGPTL6|83854|angiopoietin-like 6##AF230330|ANGPTL6|83854|angiopoietin-like 6##AL137694|C19orf66|55337|chromosome 19 open reading frame 66##BC026180|C19orf66|55337|chromosome 19 open reading frame 66##AK002148|C19orf66|55337|chromosome 19 open reading frame 66##BC010847|C19orf66|55337|chromosome 19 open reading frame 66##BC035817|C19orf66|55337|chromosome 19 open reading frame 66##BC171852|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001040664|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001198690|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_020230|PPAN|56342|peter pan homolog (Drosophila)##BC033202|PPAN|56342|peter pan homolog (Drosophila)##BC009833|PPAN|56342|peter pan homolog (Drosophila)##AJ292529|PPAN|56342|peter pan homolog (Drosophila)##AJ300588|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_002566|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BC073827|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BT006889|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##CR457134|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##DQ890616|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##DQ896801|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AF020833|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##U96074|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK293374|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AF094850|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK309944|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK316040|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK291320|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##BC000733|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##BC008469|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK316335|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK315896|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK296377|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##NM_003755|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G	0.0	
chr19	50740895	50741015	reg1033832.p2	4.367	+	BC018933 TSC_hg19_v1_chr19_+_50713879	-27104	+	TSC_hg19_v1_chr19_+_50706878 AY165122 BC129803 NM_001077186 NM_001145809 NM_024729 AK307783 AB290169	-34064	+	TSC_hg19_v1_chr19_+_50691445 AK125082	-49514	+	BC007877 TSC_hg19_v1_chr19_+_50796867	55889	+	AF055989 NM_004977	91678	-	BC085008 BC006149 BC111705 BC040958 BC053864 BC065203 BC032360 AF090387 AF098485 AF200344 AK300884 BC019048 AK310134 TSC_hg19_v1_chr19_-_50848025	107037	-	BC018933|MYH14|79784|myosin, heavy chain 14, non-muscle##AY165122|MYH14|79784|myosin, heavy chain 14, non-muscle##BC129803|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_001077186|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_001145809|MYH14|79784|myosin, heavy chain 14, non-muscle##NM_024729|MYH14|79784|myosin, heavy chain 14, non-muscle##AK307783|MYH14|79784|myosin, heavy chain 14, non-muscle##AB290169|MYH14|79784|myosin, heavy chain 14, non-muscle##AK125082|MYH14|79784|myosin, heavy chain 14, non-muscle##BC007877|MYH14|79784|myosin, heavy chain 14, non-muscle##AF055989|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##NM_004977|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##BC085008|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC006149|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC111705|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC040958|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC053864|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC065203|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC032360|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF090387|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF098485|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF200344|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK300884|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC019048|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK310134|NAPSB|256236|napsin B aspartic peptidase pseudogene	0.95976	CTCF.p2:-21:0.960
chr2	137012388	137012535	reg1033396.p2	4.367	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-136785	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-138663	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-269245	-	TSC_hg19_v1_chr2_+_137523114 AK299929	510655	+	NM_001080427	736000	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1709473	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.0	
chr2	48338987	48339135	reg1002453.p2	4.367	+	BC130445 BC136480 AK292877 AF176706 AF174599 AK223592 BC043258 AY827075 TSC_hg19_v1_chr2_-_48132864 AK297444 NM_001190274	-206268	-	AK304140 AK315108 NM_025133	-223210	-	BC071594 NM_000179 TSC_hg19_v1_chr2_+_48010283 U28946 D89646 BC104665 U54777 BC004246 AK293921 AK308392 AB590153 DQ892898	-328765	+	TSC_hg19_v1_chr2_+_48541851 NM_002158 BC063305	202757	+	AY134855 NM_001135629 NM_001193475 NM_152994 TSC_hg19_v1_chr2_+_48667936 AK172762 AK122900 AY092062 BC111059 AK307755 BC117279 BC143466 BC143463 BC040721	328911	+	AK309740 NM_001198593 TSC_hg19_v1_chr2_+_48757177	418060	+	BC130445|FBXO11|80204|F-box protein 11##BC136480|FBXO11|80204|F-box protein 11##AK292877|FBXO11|80204|F-box protein 11##AF176706|FBXO11|80204|F-box protein 11##AF174599|FBXO11|80204|F-box protein 11##AK223592|FBXO11|80204|F-box protein 11##BC043258|FBXO11|80204|F-box protein 11##AY827075|FBXO11|80204|F-box protein 11##AK297444|FBXO11|80204|F-box protein 11##NM_001190274|FBXO11|80204|F-box protein 11##AK304140|FBXO11|80204|F-box protein 11##AK315108|FBXO11|80204|F-box protein 11##NM_025133|FBXO11|80204|F-box protein 11##BC071594|MSH6|2956|mutS homolog 6 (E. coli)##NM_000179|MSH6|2956|mutS homolog 6 (E. coli)##U28946|MSH6|2956|mutS homolog 6 (E. coli)##D89646|MSH6|2956|mutS homolog 6 (E. coli)##BC104665|MSH6|2956|mutS homolog 6 (E. coli)##U54777|MSH6|2956|mutS homolog 6 (E. coli)##BC004246|MSH6|2956|mutS homolog 6 (E. coli)##AK293921|MSH6|2956|mutS homolog 6 (E. coli)##AK308392|MSH6|2956|mutS homolog 6 (E. coli)##DQ892898|MSH6|2956|mutS homolog 6 (E. coli)##NM_002158|FOXN2|3344|forkhead box N2##BC063305|FOXN2|3344|forkhead box N2##AY134855|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_001135629|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_001193475|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##NM_152994|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK172762|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK122900|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AY092062|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC111059|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK307755|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC117279|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC143466|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC143463|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##BC040721|PPP1R21|129285|protein phosphatase 1, regulatory subunit 21##AK309740|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough##NM_001198593|STON1-GTF2A1L|286749|STON1-GTF2A1L readthrough	0.0	
chr4	116155815	116155996	reg1015780.p2	4.367	+	BC113075 BC012326 AK289670 AB036429 NM_022569	-120924	-	NM_003360 U30930	-612383	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-636322	+	AK074617 BC030831 NM_152402	1850828	-	TSC_hg19_v1_chr4_+_118954764 AY358852	2798866	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	2799670	+	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.0	
chr5	88639478	88639587	reg1016801.p1	4.367	+	AL833268 AL833274 NM_001131005 NM_001193347	-439638	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-454268	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-454412	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	1066007	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1130650	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1131046	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr1	37486408	37486552	reg1032633.p2	4.366	+	NM_000760 NM_156039 NM_172313	-537566	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-537996	-	TSC_hg19_v1_chr1_-_36929984 AB049946 AB209905 AK021626 BC031336 AF265439 AK315441 AK302633 NM_031280	-556521	-	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	13295	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	453617	+	TSC_hg19_v1_chr1_+_37940140 AK026884	453670	+	NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AB049946|MRPS15|64960|mitochondrial ribosomal protein S15##AB209905|MRPS15|64960|mitochondrial ribosomal protein S15##AK021626|MRPS15|64960|mitochondrial ribosomal protein S15##BC031336|MRPS15|64960|mitochondrial ribosomal protein S15##AF265439|MRPS15|64960|mitochondrial ribosomal protein S15##AK315441|MRPS15|64960|mitochondrial ribosomal protein S15##AK302633|MRPS15|64960|mitochondrial ribosomal protein S15##NM_031280|MRPS15|64960|mitochondrial ribosomal protein S15##AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.16168	
chr21	43759436	43759540	reg1003663.p4	4.366	+	NM_003226 AF432265	-23756	-	L08044 DQ891963 DQ895153 L15203 BC017859 TSC_hg19_v1_chr21_-_43735520	-23997	-	TSC_hg19_v1_chr21_+_43710190 AF038175	-49275	+	X51698 BC032820 NM_005423	11650	-	M12075 BC032811 NM_003225 X00474 X52003	27134	-	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	56673	-	NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##L08044|TFF3|7033|trefoil factor 3 (intestinal)##DQ891963|TFF3|7033|trefoil factor 3 (intestinal)##DQ895153|TFF3|7033|trefoil factor 3 (intestinal)##L15203|TFF3|7033|trefoil factor 3 (intestinal)##BC017859|TFF3|7033|trefoil factor 3 (intestinal)##AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3	0.0	
chr22	42327726	42327825	reg1026367.p1	4.366	+	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	-4976	-	NM_001207020	-17105	-	TSC_hg19_v1_chr22_+_42229269 CU013184 CU013472 AB463291	-98504	+	EU035297 NM_001110215	8447	-	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	15348	-	TSC_hg19_v1_chr22_+_42372810 NM_019106 NM_145733 AK290037 AK299919 AL833942 BC111779 CR456572 AF285107 AF285108 AF285109	45133	+	AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_001207020|SHISA8|440829|shisa homolog 8 (Xenopus laevis)##CU013184|SREBF2|6721|sterol regulatory element binding transcription factor 2##CU013472|SREBF2|6721|sterol regulatory element binding transcription factor 2##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M##NM_019106|SEPT3|55964|septin 3##NM_145733|SEPT3|55964|septin 3##AK290037|SEPT3|55964|septin 3##AK299919|SEPT3|55964|septin 3##AL833942|SEPT3|55964|septin 3##BC111779|SEPT3|55964|septin 3##CR456572|SEPT3|55964|septin 3##AF285107|SEPT3|55964|septin 3##AF285108|SEPT3|55964|septin 3##AF285109|SEPT3|55964|septin 3	0.403397	CTCF.p2:-96:0.403
chr8	52438448	52438628	reg1003299.p1	4.366	+	AJ003030 NM_018967	-1613942	+	NM_001007176 BC017981 AJ276240	-2453629	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-2604628	-	EU170240 AY877349 NM_144651	283415	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	373064	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	373189	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.0	
chr9	140513014	140513195	reg1033199.p1	4.366	+	TSC_hg19_v1_chr9_-_140513074 BC066646	-41	-	TSC_hg19_v1_chr9_+_140500158 CU689346	-12931	+	TSC_hg19_v1_chr9_+_140500155 AK308376	-12953	+	TSC_hg19_v1_chr9_-_140513273 BC011781 AF267857 NM_032937	189	-	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	339	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	363	+	BC066646|C9orf37|85026|chromosome 9 open reading frame 37##AK308376|ARRDC1|92714|arrestin domain containing 1##BC011781|C9orf37|85026|chromosome 9 open reading frame 37##AF267857|C9orf37|85026|chromosome 9 open reading frame 37##NM_032937|C9orf37|85026|chromosome 9 open reading frame 37##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1	0.0	
chr22	26568483	26568617	reg1030730.p1	4.365	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	-2887	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	-3053	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	-3113	+	TSC_hg19_v1_chr22_+_26825246 NM_020437 BC036753 AK315112	256774	+	AK097886 BC035614 AK054717 AL365512 NM_152841	306913	-	TSC_hg19_v1_chr22_-_26879750 AK057648 AK290211	311192	-	CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4##BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4##AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4##AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4##NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4##AK057648|HPS4|89781|Hermansky-Pudlak syndrome 4##AK290211|HPS4|89781|Hermansky-Pudlak syndrome 4	0.0	
chr2	74560457	74560554	reg1029689.p2	4.365	+	AF243499 AF293338 NM_021196	-18355	-	NM_006636 TSC_hg19_v1_chr2_+_74425741 AK300035 AK130664 AK222826 AK223041 AK302245 AK313138 BC015062 BC001548 BC017054 AB529041 X16396 DQ894679	-134768	+	AK057260 TSC_hg19_v1_chr2_-_74425749	-134790	-	NM_133478	10028	-	AK315014 BC071583 TSC_hg19_v1_chr2_-_74601817 NM_001135041 NM_023019	41252	-	AK314352 TSC_hg19_v1_chr2_-_74607441 NM_001135040 NM_001190837 NM_004082	46948	-	AF243499|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##AF293338|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##NM_021196|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##NM_006636|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK300035|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK130664|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK222826|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK223041|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK302245|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##AK313138|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC015062|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC001548|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##BC017054|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##X16396|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##DQ894679|MTHFD2|10797|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase##NM_133478|SLC4A5|57835|solute carrier family 4, sodium bicarbonate cotransporter, member 5##AK315014|DCTN1|1639|dynactin 1##BC071583|DCTN1|1639|dynactin 1##NM_001135041|DCTN1|1639|dynactin 1##NM_023019|DCTN1|1639|dynactin 1##AK314352|DCTN1|1639|dynactin 1##NM_001135040|DCTN1|1639|dynactin 1##NM_001190837|DCTN1|1639|dynactin 1##NM_004082|DCTN1|1639|dynactin 1	0.938147	CTCF.p2:-1:0.938
chr3	35988110	35988252	reg1027532.p1	4.365	+	BC017805 NM_198399 BC066651 BC036548	-265722	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	-266985	+	BC051828 NM_016300	-304333	+	TSC_hg19_v1_chr3_+_36421976 AK313493 BC020221 AK299160 AK302697 D86640 NM_003149 DQ892180 DQ895374 DQ895375 AB529185 AK310425	433871	+	NM_033403	793170	-	TSC_hg19_v1_chr3_-_36986546 NM_014831	998389	-	BC017805|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_198399|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC066651|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC036548|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK313493|STAC|6769|SH3 and cysteine rich domain##BC020221|STAC|6769|SH3 and cysteine rich domain##AK299160|STAC|6769|SH3 and cysteine rich domain##AK302697|STAC|6769|SH3 and cysteine rich domain##D86640|STAC|6769|SH3 and cysteine rich domain##NM_003149|STAC|6769|SH3 and cysteine rich domain##DQ892180|STAC|6769|SH3 and cysteine rich domain##DQ895374|STAC|6769|SH3 and cysteine rich domain##DQ895375|STAC|6769|SH3 and cysteine rich domain##AK310425|STAC|6769|SH3 and cysteine rich domain##NM_033403|DCLK3|85443|doublecortin-like kinase 3##NM_014831|TRANK1|9881|tetratricopeptide repeat and ankyrin repeat containing 1	0.134292	
chr4	120411620	120411757	reg1027399.p1	4.365	+	TSC_hg19_v1_chr4_-_120375778 BC070391	-35910	-	CU686944 AK025079 BC069617 BC069466 BC069625 BC069637 BC111791 NM_000134	-168402	-	AY605045 NM_001170330	-186089	-	AM392687 AM392735 AM392945 AM393171 AM393311 AM393426 AM393432 AM393814 AY264918 AB015656 NM_033430 AF155193 TSC_hg19_v1_chr4_-_120548474	136717	-	TSC_hg19_v1_chr4_-_120549121 AF155194 NM_033437	137488	-	AB527373 AM393036 AM393270 AM393448 AK290189 BC126233 AJ004865 AF155192 TSC_hg19_v1_chr4_-_120549960 AF043731 NM_001083	138215	-	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal##BC069617|FABP2|2169|fatty acid binding protein 2, intestinal##BC069466|FABP2|2169|fatty acid binding protein 2, intestinal##BC069625|FABP2|2169|fatty acid binding protein 2, intestinal##BC069637|FABP2|2169|fatty acid binding protein 2, intestinal##BC111791|FABP2|2169|fatty acid binding protein 2, intestinal##NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal##AY605045|C4orf3|401152|chromosome 4 open reading frame 3##NM_001170330|C4orf3|401152|chromosome 4 open reading frame 3##AM392687|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM392735|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM392945|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393171|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393311|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393426|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393432|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393814|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AY264918|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AB015656|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033430|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155193|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	0.0	
chr13	53471696	53471774	reg1030903.p1	4.364	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	-48960	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-157773	-	AB006000 CR541910 TSC_hg19_v1_chr13_-_53313891	-157871	-	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	131177	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	4243381	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	4249951	+	AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AB006000|LECT1|11061|leukocyte cell derived chemotaxin 1##CR541910|LECT1|11061|leukocyte cell derived chemotaxin 1##AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	0.94566	CTCF.p2:19:0.946
chr2	109033838	109033968	reg1031522.p1	4.364	+	BC058861 NM_006588 AK298755 AF055584 AK297851 BC125043	-39400	+	AF186252 AF186255 NM_001056 NM_176825 AF186251 AF186254 AK297086 AK313193 AK298306 U66036 AF186253 AF186256 AB008164 AF026303 BC005353	-128618	+	AB528243 NM_001008743	-170253	+	NM_181453 BC037774 TSC_hg19_v1_chr2_+_109065661	31717	+	TSC_hg19_v1_chr2_+_109065677 AF432211 AB002334 BC146789	31782	+	TSC_hg19_v1_chr2_-_109150636 BC004487 AK095987	116742	-	BC058861|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##NM_006588|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK298755|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK297851|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##BC125043|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AF186252|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186255|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001056|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_176825|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186251|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186254|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK297086|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK313193|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK298306|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##U66036|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186253|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186256|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AB008164|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF026303|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC005353|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3##NM_181453|GCC2|9648|GRIP and coiled-coil domain containing 2##BC037774|GCC2|9648|GRIP and coiled-coil domain containing 2##AF432211|GCC2|9648|GRIP and coiled-coil domain containing 2##AB002334|GCC2|9648|GRIP and coiled-coil domain containing 2##BC146789|GCC2|9648|GRIP and coiled-coil domain containing 2##BC004487|FLJ38668|644903|uncharacterized LOC644903##AK095987|FLJ38668|644903|uncharacterized LOC644903	1.018803	CTCF.p2:5:0.961
chr5	10632225	10632405	reg1028311.p1	4.364	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-67873	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-190163	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-190312	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	128944	-	TSC_hg19_v1_chr5_-_10761341 BC002726	129027	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	129084	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.0	
chr10	127702651	127702773	reg1031967.p2	4.363	+	NM_145235 BC024189 CR627249 TSC_hg19_v1_chr10_+_127585124 AY358154 AK304407 DQ786222	-117556	+	TSC_hg19_v1_chr10_-_127585056 BC068471	-117682	-	AK001751 AY064250 AF427340 NM_018180	-132845	-	AK291629 TSC_hg19_v1_chr10_-_128076950	374239	-	AY358878 AF023476 AF023477 TSC_hg19_v1_chr10_-_128077049 AK127856	374319	-	TSC_hg19_v1_chr10_-_128077062 BC060804	374352	-	NM_145235|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##BC024189|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##CR627249|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##AY358154|FANK1|92565|fibronectin type III and ankyrin repeat domains 1##BC068471|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AK001751|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AY064250|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AF427340|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##NM_018180|DHX32|55760|DEAH (Asp-Glu-Ala-His) box polypeptide 32##AK291629|ADAM12|8038|ADAM metallopeptidase domain 12##AY358878|ADAM12|8038|ADAM metallopeptidase domain 12##AF023476|ADAM12|8038|ADAM metallopeptidase domain 12##AF023477|ADAM12|8038|ADAM metallopeptidase domain 12##AK127856|ADAM12|8038|ADAM metallopeptidase domain 12##BC060804|ADAM12|8038|ADAM metallopeptidase domain 12	0.754186	CTCF.p2:0:0.754
chr10	16821364	16821545	reg1027544.p1	4.363	+	NM_001010908	-257451	-	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	-342469	+	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	-918963	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	37905	-	TSC_hg19_v1_chr10_-_16859397 AK225681 AK312520	37940	-	TSC_hg19_v1_chr10_-_16859451 BC015644 BC005993 BC107898 BX647733 NM_012425 NM_152724	37981	-	NM_001010908|C1QL3|389941|complement component 1, q subcomponent-like 3##AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1##AK225681|RSU1|6251|Ras suppressor protein 1##AK312520|RSU1|6251|Ras suppressor protein 1##BC015644|RSU1|6251|Ras suppressor protein 1##BC005993|RSU1|6251|Ras suppressor protein 1##BC107898|RSU1|6251|Ras suppressor protein 1##BX647733|RSU1|6251|Ras suppressor protein 1##NM_012425|RSU1|6251|Ras suppressor protein 1##NM_152724|RSU1|6251|Ras suppressor protein 1	0.0	
chr12	120561726	120561890	reg1028689.p2	4.363	+	TSC_hg19_v1_chr12_+_120554697 BC041995 AK130486	-7099	+	TSC_hg19_v1_chr12_-_120554632 NM_001167606 NM_006861	-7169	-	TSC_hg19_v1_chr12_-_120554558 AK300127	-7243	-	TSC_hg19_v1_chr12_-_120632504 AB587307 AK297271 BC153881 D86973 NM_006836	70680	-	BC019014 BC000087 TSC_hg19_v1_chr12_-_120638906 BC070194	77093	-	AK129754 AK222571 AK304674 BC107717 D28418 TSC_hg19_v1_chr12_-_120638911 AK222468 AK291109	77102	-	NM_001167606|RAB35|11021|RAB35, member RAS oncogene family##NM_006861|RAB35|11021|RAB35, member RAS oncogene family##AK300127|RAB35|11021|RAB35, member RAS oncogene family##AK297271|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##BC153881|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##D86973|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##NM_006836|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##BC019014|RPLP0|6175|ribosomal protein, large, P0##BC000087|RPLP0|6175|ribosomal protein, large, P0##BC070194|RPLP0|6175|ribosomal protein, large, P0##AK129754|RPLP0|6175|ribosomal protein, large, P0##AK222571|RPLP0|6175|ribosomal protein, large, P0##AK304674|RPLP0|6175|ribosomal protein, large, P0##BC107717|RPLP0|6175|ribosomal protein, large, P0##D28418|RPLP0|6175|ribosomal protein, large, P0##AK222468|RPLP0|6175|ribosomal protein, large, P0##AK291109|RPLP0|6175|ribosomal protein, large, P0	0.0	
chr17	42402093	42402202	reg1027575.p1	4.363	+	AL133657 NM_001144825 NM_001144826 NM_006695 TSC_hg19_v1_chr17_+_42385950 AB209802 AK226045 BC006194 AK313669 BX537443 AF055026 CR456748 CU675291 U93871	-16157	+	BC101574 BC101570 M27819 NM_000342 X12609 TSC_hg19_v1_chr17_-_42345504	-56678	-	BC050302 TSC_hg19_v1_chr17_+_42299409	-102802	+	TSC_hg19_v1_chr17_-_42402172 BC096819 BC009330 AK026060 AL133584 BC001398 AK289357 AK295478 AK301139	19	-	TSC_hg19_v1_chr17_-_42402202 NM_001143780 NM_016016	60	-	BC000324 NM_002087 TSC_hg19_v1_chr17_+_42422623	20409	+	AL133657|RUNDC3A|10900|RUN domain containing 3A##NM_001144825|RUNDC3A|10900|RUN domain containing 3A##NM_001144826|RUNDC3A|10900|RUN domain containing 3A##NM_006695|RUNDC3A|10900|RUN domain containing 3A##AB209802|RUNDC3A|10900|RUN domain containing 3A##AK226045|RUNDC3A|10900|RUN domain containing 3A##BC006194|RUNDC3A|10900|RUN domain containing 3A##AK313669|RUNDC3A|10900|RUN domain containing 3A##BX537443|RUNDC3A|10900|RUN domain containing 3A##AF055026|RUNDC3A|10900|RUN domain containing 3A##CR456748|RUNDC3A|10900|RUN domain containing 3A##U93871|RUNDC3A|10900|RUN domain containing 3A##BC101574|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##BC101570|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##M27819|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##NM_000342|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##X12609|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##BC096819|SLC25A39|51629|solute carrier family 25, member 39##BC009330|SLC25A39|51629|solute carrier family 25, member 39##AK026060|SLC25A39|51629|solute carrier family 25, member 39##AL133584|SLC25A39|51629|solute carrier family 25, member 39##BC001398|SLC25A39|51629|solute carrier family 25, member 39##AK289357|SLC25A39|51629|solute carrier family 25, member 39##AK295478|SLC25A39|51629|solute carrier family 25, member 39##AK301139|SLC25A39|51629|solute carrier family 25, member 39##NM_001143780|SLC25A39|51629|solute carrier family 25, member 39##NM_016016|SLC25A39|51629|solute carrier family 25, member 39##BC000324|GRN|2896|granulin##NM_002087|GRN|2896|granulin	0.0	
chr3	111852127	111852308	reg1024953.p2	4.363	+	CU688884 BC030506 AY212246 AK313368 AK128276 AF521911 NM_001190259 NM_001190260 NM_152785	-158	-	TSC_hg19_v1_chr3_+_111805267 AK303588 NM_001171747 NM_024616 AY830714 AK026839 BC017064 AK298076	-46989	+	AK131211 NM_001042575 BC117322	-93709	+	BC044801 NM_183061 AK128084	160871	-	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	199741	+	AL832529 AK129797 AK293399 BC031103 TSC_hg19_v1_chr3_+_112052024 AK074972	199807	+	BC030506|GCET2|257144|germinal center expressed transcript 2##AY212246|GCET2|257144|germinal center expressed transcript 2##AK313368|GCET2|257144|germinal center expressed transcript 2##AF521911|GCET2|257144|germinal center expressed transcript 2##NM_001190259|GCET2|257144|germinal center expressed transcript 2##NM_001190260|GCET2|257144|germinal center expressed transcript 2##NM_152785|GCET2|257144|germinal center expressed transcript 2##AK303588|C3orf52|79669|chromosome 3 open reading frame 52##NM_001171747|C3orf52|79669|chromosome 3 open reading frame 52##NM_024616|C3orf52|79669|chromosome 3 open reading frame 52##AY830714|C3orf52|79669|chromosome 3 open reading frame 52##AK026839|C3orf52|79669|chromosome 3 open reading frame 52##BC017064|C3orf52|79669|chromosome 3 open reading frame 52##AK298076|C3orf52|79669|chromosome 3 open reading frame 52##AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7##BC044801|SLC9A10|285335|solute carrier family 9, member 10##NM_183061|SLC9A10|285335|solute carrier family 9, member 10##AK128084|SLC9A10|285335|solute carrier family 9, member 10##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule##AL832529|CD200|4345|CD200 molecule##AK129797|CD200|4345|CD200 molecule##AK293399|CD200|4345|CD200 molecule##BC031103|CD200|4345|CD200 molecule##AK074972|CD200|4345|CD200 molecule	0.012542	
chr8	11324344	11324512	reg1001568.p1	4.363	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-199	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-119424	-	AJ291677 NM_054028 BC131696	-135918	+	S76617 NM_001715 BC018703 BC004473 BC038555	27165	+	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	237292	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	302840	+	AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##AJ291677|SLC35G5|83650|solute carrier family 35, member G5##NM_054028|SLC35G5|83650|solute carrier family 35, member G5##BC131696|SLC35G5|83650|solute carrier family 35, member G5##S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)	0.0	
chr12	127839714	127839883	reg1036218.p1	4.362	+	NM_052907	-2028637	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-2289730	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-2289857	+	NM_001136103	912149	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	1468645	-	BC043528 TSC_hg19_v1_chr12_+_129337985	1498186	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.891217	CTCF.p2:25:0.891
chr12	50711124	50711263	reg1033547.p2	4.362	+	BC136763 BC144402 BC144403 TSC_hg19_v1_chr12_-_50677266 AK000372 AK314447 AF198454 AL136911 AK222971 AB209512 BC110815 NM_001113546 NM_016357	-33898	-	AF198455 AK297766 TSC_hg19_v1_chr12_-_50616438 NM_001113547	-94737	-	AK023649 AF157325 NM_001243775	-115884	-	BC054024 AL833333 NM_001145475	79204	-	NM_001170803 NM_001170804 NM_001170808 NM_052879 NM_199188 NM_199190 TSC_hg19_v1_chr12_+_50794671 AL832198 CR936626 AL833272 BC022377 BC063479 AF370416 AK291746 AY004310 AK055521 BX647457 CU687740 EU831655 EU831738 EU831909 EU832003	83499	+	TSC_hg19_v1_chr12_+_50869532 AF131755	158394	+	BC136763|LIMA1|51474|LIM domain and actin binding 1##BC144402|LIMA1|51474|LIM domain and actin binding 1##BC144403|LIMA1|51474|LIM domain and actin binding 1##AK000372|LIMA1|51474|LIM domain and actin binding 1##AK314447|LIMA1|51474|LIM domain and actin binding 1##AF198454|LIMA1|51474|LIM domain and actin binding 1##AL136911|LIMA1|51474|LIM domain and actin binding 1##AK222971|LIMA1|51474|LIM domain and actin binding 1##AB209512|LIMA1|51474|LIM domain and actin binding 1##BC110815|LIMA1|51474|LIM domain and actin binding 1##NM_001113546|LIMA1|51474|LIM domain and actin binding 1##NM_016357|LIMA1|51474|LIM domain and actin binding 1##AF198455|LIMA1|51474|LIM domain and actin binding 1##AK297766|LIMA1|51474|LIM domain and actin binding 1##NM_001113547|LIMA1|51474|LIM domain and actin binding 1##AK023649|LIMA1|51474|LIM domain and actin binding 1##AF157325|LIMA1|51474|LIM domain and actin binding 1##NM_001243775|LIMA1|51474|LIM domain and actin binding 1##BC054024|FAM186A|121006|family with sequence similarity 186, member A##AL833333|FAM186A|121006|family with sequence similarity 186, member A##NM_001145475|FAM186A|121006|family with sequence similarity 186, member A##NM_001170803|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_001170804|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_001170808|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_052879|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_199188|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_199190|LARP4|113251|La ribonucleoprotein domain family, member 4##AL832198|LARP4|113251|La ribonucleoprotein domain family, member 4##CR936626|LARP4|113251|La ribonucleoprotein domain family, member 4##AL833272|LARP4|113251|La ribonucleoprotein domain family, member 4##BC022377|LARP4|113251|La ribonucleoprotein domain family, member 4##BC063479|LARP4|113251|La ribonucleoprotein domain family, member 4##AF370416|LARP4|113251|La ribonucleoprotein domain family, member 4##AK291746|LARP4|113251|La ribonucleoprotein domain family, member 4##AY004310|LARP4|113251|La ribonucleoprotein domain family, member 4##AK055521|LARP4|113251|La ribonucleoprotein domain family, member 4##BX647457|LARP4|113251|La ribonucleoprotein domain family, member 4##EU831655|LARP4|113251|La ribonucleoprotein domain family, member 4##EU831738|LARP4|113251|La ribonucleoprotein domain family, member 4##EU831909|LARP4|113251|La ribonucleoprotein domain family, member 4##EU832003|LARP4|113251|La ribonucleoprotein domain family, member 4##AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4	0.0	
chr17	79283117	79283288	reg1031961.p1	4.362	+	TSC_hg19_v1_chr17_-_79269100 NM_001037984 NM_138570	-14109	-	TSC_hg19_v1_chr17_-_79269071 BC014642	-14136	-	BC141912 BC127837 NM_001086521 TSC_hg19_v1_chr17_+_79213151 BC079831	-70068	+	AK096111 NM_178520	21271	-	NM_001080519	90337	+	TSC_hg19_v1_chr17_-_79478238 BC009544 BC010417 BC018861 M16247	195208	-	NM_001037984|SLC38A10|124565|solute carrier family 38, member 10##NM_138570|SLC38A10|124565|solute carrier family 38, member 10##BC014642|SLC38A10|124565|solute carrier family 38, member 10##BC127837|C17orf89|284184|chromosome 17 open reading frame 89##NM_001086521|C17orf89|284184|chromosome 17 open reading frame 89##BC079831|C17orf89|284184|chromosome 17 open reading frame 89##AK096111|TMEM105|284186|transmembrane protein 105##NM_178520|TMEM105|284186|transmembrane protein 105##NM_001080519|BAHCC1|57597|BAH domain and coiled-coil containing 1##BC009544|ACTG1|71|actin, gamma 1##BC010417|ACTG1|71|actin, gamma 1##BC018861|ACTG1|71|actin, gamma 1##M16247|ACTG1|71|actin, gamma 1	0.145496	
chr20	52376549	52376729	reg1027881.p1	4.362	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-165840	-	AF041259 NM_006526	-177004	-	AK302570 NM_001193421	-574818	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	310423	-	AK315220 NM_003657	310664	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	413881	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr3	67435334	67435440	reg1036509.p1	4.362	+	NM_032505 AK096640 AK300397	-386659	+	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	-883923	-	AF381545 BC140907 NM_015541 AY730707	-884535	-	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	269675	-	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	269763	+	AY325114 NM_001252216	605346	+	NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AY325114|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##NM_001252216|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1	0.977515	CTCF.p2:4:0.978
chr9	86535627	86535756	reg1031034.p1	4.362	+	AB033131 AB033132 BC014476 NM_001135953 NM_025211	-103043	-	AK074535 TSC_hg19_v1_chr9_-_86323127 NM_013438 NM_053067	-212549	-	TSC_hg19_v1_chr9_-_86322874 AL136643	-212819	-	TSC_hg19_v1_chr9_-_86536400 AK297689 BC140788 AY237536 AY237537 AY237538 NM_017576	698	-	BC137461 BC137462 TSC_hg19_v1_chr9_-_86571611	35884	-	BC004407 TSC_hg19_v1_chr9_-_86571631	35948	-	AB033131|GKAP1|80318|G kinase anchoring protein 1##AB033132|GKAP1|80318|G kinase anchoring protein 1##BC014476|GKAP1|80318|G kinase anchoring protein 1##NM_001135953|GKAP1|80318|G kinase anchoring protein 1##NM_025211|GKAP1|80318|G kinase anchoring protein 1##AK074535|UBQLN1|29979|ubiquilin 1##NM_013438|UBQLN1|29979|ubiquilin 1##NM_053067|UBQLN1|29979|ubiquilin 1##AL136643|UBQLN1|29979|ubiquilin 1##AK297689|KIF27|55582|kinesin family member 27##BC140788|KIF27|55582|kinesin family member 27##AY237536|KIF27|55582|kinesin family member 27##AY237537|KIF27|55582|kinesin family member 27##AY237538|KIF27|55582|kinesin family member 27##NM_017576|KIF27|55582|kinesin family member 27##BC137461|C9orf64|84267|chromosome 9 open reading frame 64##BC137462|C9orf64|84267|chromosome 9 open reading frame 64##BC004407|C9orf64|84267|chromosome 9 open reading frame 64	0.0	
chr1	207578189	207578332	reg1004192.p1	4.361	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-83155	+	TSC_hg19_v1_chr1_+_207495084 AB240569 AB240570	-83183	+	TSC_hg19_v1_chr1_+_207495024 AK312448 AK300621 AK298549 BC001288 M30142 M31516	-83225	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	49401	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	91318	+	NM_175710 BC109190 BC109191	240227	+	AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240569|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240570|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK312448|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK300621|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK298549|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BC001288|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M30142|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M31516|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like	0.0	
chr19	2068051	2068166	reg1013871.p2	4.361	+	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-16875	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-21867	-	TSC_hg19_v1_chr19_-_2042036 AK001730	-26058	-	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	17135	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	28157	-	TSC_hg19_v1_chr19_-_2096297 AL832474	28186	-	BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK001730|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A	0.0	
chr20	42192226	42192363	reg1037211.p1	4.361	+	BC006523 TSC_hg19_v1_chr20_+_42187715 BC014037 AF169034	-4574	+	NM_170693 TSC_hg19_v1_chr20_+_42187666 AK308502	-4644	+	TSC_hg19_v1_chr20_+_42143151 AK310345 NM_015478 AK308334 BC039820 BC034398 HQ257883 EU446490	-49176	+	NM_001199264 BC065511 AK289596	1520	+	AF186470 NM_016276	2442	+	TSC_hg19_v1_chr20_+_42219576 NM_016004 BC021086 BC039831 AK301915 AF151811 AK001436	27318	+	BC006523|SGK2|10110|serum/glucocorticoid regulated kinase 2##BC014037|SGK2|10110|serum/glucocorticoid regulated kinase 2##AF169034|SGK2|10110|serum/glucocorticoid regulated kinase 2##NM_170693|SGK2|10110|serum/glucocorticoid regulated kinase 2##AK308502|SGK2|10110|serum/glucocorticoid regulated kinase 2##AK310345|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##NM_015478|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK308334|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##BC039820|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##BC034398|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##EU446490|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##NM_001199264|SGK2|10110|serum/glucocorticoid regulated kinase 2##BC065511|SGK2|10110|serum/glucocorticoid regulated kinase 2##AK289596|SGK2|10110|serum/glucocorticoid regulated kinase 2##AF186470|SGK2|10110|serum/glucocorticoid regulated kinase 2##NM_016276|SGK2|10110|serum/glucocorticoid regulated kinase 2##NM_016004|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##BC039831|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##AK301915|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##AF151811|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)##AK001436|IFT52|51098|intraflagellar transport 52 homolog (Chlamydomonas)	0.013365	
chr3	11862286	11862426	reg1027454.p2	4.361	+	TSC_hg19_v1_chr3_-_11762012 D50911 BC001514 AK130542 BC000763 BC003038 NM_014667	-100241	-	TSC_hg19_v1_chr3_-_11685397 NM_001128219	-176960	-	AK307708 TSC_hg19_v1_chr3_-_11623831 NM_001128220	-238523	-	EU832515 EU832596 AK295839 TSC_hg19_v1_chr3_-_11888358 AK310993 BC015088 NM_138807 AK092776 AX747723 AK309733 AK303598	25903	-	TSC_hg19_v1_chr3_+_12045861 NM_003178 NM_133625 AK094464 BC051307 AB209088 U40215 AF077671 AF077737	183547	+	BT019627 CU679743 DQ891795 DQ894978 U76456 TSC_hg19_v1_chr3_-_12200413 AK313018	338023	-	D50911|VGLL4|9686|vestigial like 4 (Drosophila)##BC001514|VGLL4|9686|vestigial like 4 (Drosophila)##AK130542|VGLL4|9686|vestigial like 4 (Drosophila)##BC000763|VGLL4|9686|vestigial like 4 (Drosophila)##BC003038|VGLL4|9686|vestigial like 4 (Drosophila)##NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)##AK307708|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)##EU832515|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##EU832596|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK295839|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK310993|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##BC015088|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_138807|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK092776|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK309733|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK303598|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_003178|SYN2|6854|synapsin II##NM_133625|SYN2|6854|synapsin II##AK094464|SYN2|6854|synapsin II##BC051307|SYN2|6854|synapsin II##AB209088|SYN2|6854|synapsin II##U40215|SYN2|6854|synapsin II##AF077671|SYN2|6854|synapsin II##AF077737|SYN2|6854|synapsin II##BT019627|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ891795|TIMP4|7079|TIMP metallopeptidase inhibitor 4##DQ894978|TIMP4|7079|TIMP metallopeptidase inhibitor 4##U76456|TIMP4|7079|TIMP metallopeptidase inhibitor 4##AK313018|TIMP4|7079|TIMP metallopeptidase inhibitor 4	0.011474	
chr8	95007135	95007224	reg1015464.p2	4.361	+	NM_001161778 AB590483 TSC_hg19_v1_chr8_+_94930074 AK302651	-77144	+	NM_018444 TSC_hg19_v1_chr8_+_94929171 BC047619 NM_001161780 AK057079 NM_001161779 BC064978 AF155661 NM_001161781	-77999	+	AK308071 NM_001142301 NM_153704 AK092244 AX747428 TSC_hg19_v1_chr8_+_94767121 AK308735 BX648768 BC031220 BC017974 BC054338 AK094935 BC032835	-240065	+	U07969 BC112013 BC113464 TSC_hg19_v1_chr8_-_95220784 X83228 AK301001 NM_004063	213615	-	AK312873 NM_001144663	222351	-	U10550 TSC_hg19_v1_chr8_-_95274525	267343	-	NM_001161778|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK302651|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_018444|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC047619|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161780|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK057079|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161779|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC064978|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AF155661|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161781|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK308071|TMEM67|91147|transmembrane protein 67##NM_001142301|TMEM67|91147|transmembrane protein 67##NM_153704|TMEM67|91147|transmembrane protein 67##AK092244|TMEM67|91147|transmembrane protein 67##AK308735|TMEM67|91147|transmembrane protein 67##BX648768|TMEM67|91147|transmembrane protein 67##BC031220|TMEM67|91147|transmembrane protein 67##BC017974|TMEM67|91147|transmembrane protein 67##BC054338|TMEM67|91147|transmembrane protein 67##AK094935|TMEM67|91147|transmembrane protein 67##BC032835|TMEM67|91147|transmembrane protein 67##U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle	0.91964	
chr9	36458448	36458591	reg1028479.p1	4.361	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-57344	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-57622	-	AL136817 BC033786 NM_022781 NM_194329	-58266	-	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	114405	+	TSC_hg19_v1_chr9_-_37034361 NM_016734	575897	-	TSC_hg19_v1_chr9_+_37079908 AK091718	621387	+	NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##AL136817|RNF38|152006|ring finger protein 38##BC033786|RNF38|152006|ring finger protein 38##NM_022781|RNF38|152006|ring finger protein 38##NM_194329|RNF38|152006|ring finger protein 38##AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.0	
chr1	207086875	207086942	reg1002214.p4	4.360	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	-16108	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	-47733	+	AF453946 NM_013371	-84687	+	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	8379	-	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	32853	-	AK298394 NM_001122979 NM_001170631 NM_032029	57048	-	NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	0.0	
chr1	39429954	39430062	reg1030406.p1	4.360	+	BC065247 NM_017821 BC013103	-22549	-	AK312811 BC051675 AK123051 NM_030772	-82731	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	-90992	-	TSC_hg19_v1_chr1_+_39456956 NM_001136275 NM_024595 AK022728 AK092624 AX747634 AK124799 AK126262 AK223276 AK298890 AK303098 BC001498 BC119745 BC119746 AY326465	27054	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	62000	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	117080	+	NM_017821|RHBDL2|54933|rhomboid, veinlet-like 2 (Drosophila)##BC013103|RHBDL2|54933|rhomboid, veinlet-like 2 (Drosophila)##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##NM_001136275|AKIRIN1|79647|akirin 1##NM_024595|AKIRIN1|79647|akirin 1##AK022728|AKIRIN1|79647|akirin 1##AK092624|AKIRIN1|79647|akirin 1##AK124799|AKIRIN1|79647|akirin 1##AK126262|AKIRIN1|79647|akirin 1##AK223276|AKIRIN1|79647|akirin 1##AK298890|AKIRIN1|79647|akirin 1##AK303098|AKIRIN1|79647|akirin 1##BC001498|AKIRIN1|79647|akirin 1##BC119745|AKIRIN1|79647|akirin 1##BC119746|AKIRIN1|79647|akirin 1##AY326465|AKIRIN1|79647|akirin 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1	0.984464	CTCF.p2:6:0.984
chr17	38497479	38497660	reg1035004.p1	4.360	+	TSC_hg19_v1_chr17_+_38474548 AK130192	-23022	+	TSC_hg19_v1_chr17_+_38474521 AK292205 FJ487576	-23045	+	NM_001145301 NM_001145302 TSC_hg19_v1_chr17_+_38474476	-23089	+	NM_001024809	701	+	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	23377	-	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	76555	-	AK130192|RARA|5914|retinoic acid receptor, alpha##AK292205|RARA|5914|retinoic acid receptor, alpha##FJ487576|RARA|5914|retinoic acid receptor, alpha##NM_001145301|RARA|5914|retinoic acid receptor, alpha##NM_001145302|RARA|5914|retinoic acid receptor, alpha##NM_001024809|RARA|5914|retinoic acid receptor, alpha##AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa	0.024755	
chr20	35937253	35937384	reg1032003.p1	4.360	+	TSC_hg19_v1_chr20_+_35918065 BC016822 BC014672	-19233	+	TSC_hg19_v1_chr20_+_35918057 AK292971 NM_001003897 NM_022077	-19283	+	X00094 BC098109 BC098161 BC099727 NM_001184731 NM_021081	-52031	-	TSC_hg19_v1_chr20_+_35973086 AF272982 NM_005417	35775	+	TSC_hg19_v1_chr20_+_35974513 NM_198291 Z18364	37189	+	TSC_hg19_v1_chr20_+_36011960 BC011566	74685	+	BC016822|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC014672|MANBAL|63905|mannosidase, beta A, lysosomal-like##AK292971|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_001003897|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_022077|MANBAL|63905|mannosidase, beta A, lysosomal-like##X00094|GHRH|2691|growth hormone releasing hormone##BC098109|GHRH|2691|growth hormone releasing hormone##BC098161|GHRH|2691|growth hormone releasing hormone##BC099727|GHRH|2691|growth hormone releasing hormone##NM_001184731|GHRH|2691|growth hormone releasing hormone##NM_021081|GHRH|2691|growth hormone releasing hormone##AF272982|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005417|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##BC011566|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	0.0	
chr20	62643392	62643572	reg1022807.p3	4.360	+	TSC_hg19_v1_chr20_+_62612576 AB527848	-30896	+	AF221842 TSC_hg19_v1_chr20_+_62612506 AF026031 AK314310 AB019219 BC001666	-30951	+	TSC_hg19_v1_chr20_+_62612487 AK225993 AK001554	-31005	+	AJ243896 AF270652 BC111390 NM_018419 BC035513 BC038590 BC073971 TSC_hg19_v1_chr20_-_62680993 AB033888	37456	-	NM_198723	44956	+	NM_003195	50527	+	AF221842|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF026031|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK314310|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AB019219|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##BC001666|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK225993|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK001554|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AJ243896|SOX18|54345|SRY (sex determining region Y)-box 18##AF270652|SOX18|54345|SRY (sex determining region Y)-box 18##BC111390|SOX18|54345|SRY (sex determining region Y)-box 18##NM_018419|SOX18|54345|SRY (sex determining region Y)-box 18##BC035513|SOX18|54345|SRY (sex determining region Y)-box 18##BC038590|SOX18|54345|SRY (sex determining region Y)-box 18##BC073971|SOX18|54345|SRY (sex determining region Y)-box 18##AB033888|SOX18|54345|SRY (sex determining region Y)-box 18##NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2	0.0	
chr8	140225695	140225783	reg1028867.p1	4.360	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	-299495	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-716633	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-3755538	+	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	489543	-	AB067469 TSC_hg19_v1_chr8_-_141467841	1242086	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	1242119	-	AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9	0.996224	CTCF.p2:10:0.996
chr12	5665369	5665464	reg1035986.p2	4.359	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	-62078	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	-124140	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	-512297	+	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	389058	-	AJ272204 NM_020373	389981	-	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	568343	-	BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor	0.959077	CTCF.p2:-17:0.959
chr15	31556414	31556488	reg1031605.p2	4.359	+	NM_001243538	-33402	-	GQ502181 HM135791 NM_001252020	-103023	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-162534	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	62887	+	AJ430383 NM_130901	391090	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	606378	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.0	
chr17	47295541	47295694	reg1030562.p1	4.359	+	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-7540	+	NM_001198754	-7682	-	AB037886 NM_001135186 NM_016428	-8029	+	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	12526	-	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	143963	-	BC095460 TSC_hg19_v1_chr17_-_47492215	196598	-	BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AB037886|ABI3|51225|ABI family, member 3##NM_001135186|ABI3|51225|ABI family, member 3##NM_016428|ABI3|51225|ABI family, member 3##BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC095460|PHB|5245|prohibitin	0.0	
chr21	39724469	39724618	reg1005213.p1	4.359	+	NM_170737	-80115	+	D87291 NM_170736 AK292812	-95614	+	BC013327 NM_002243	-95880	+	AB489170 AM392572 CU691828 EU446470 AK304662 AK303518 BC040168 AK300395 NM_001136155 NM_182918	145822	-	M21535 NM_001243429	232302	-	TSC_hg19_v1_chr21_-_40032563 AK309469 NM_001243428	308033	-	NM_170737|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##M21535|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243429|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK309469|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243428|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)	0.0	
chr2	223201266	223201392	reg1030583.p1	4.359	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	-37804	-	AK057009 NM_153038 BC109388	-38417	+	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	-42309	-	TSC_hg19_v1_chr2_+_223289261 AK314322	87911	+	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	87978	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	319465	-	EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK314322|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit	0.184518	
chr10	73572022	73572136	reg1000981.p2	4.358	+	AY563161 AY563162 NM_001171935 NM_001171936	-440	+	AY563165 AY563166 NM_001171933 NM_001171934	-16552	+	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	-38773	-	TSC_hg19_v1_chr10_-_73611004 BT006849 CR456746 CU678650 DQ893009 DQ896255 M60255 M60257 M60258 AB527305 BC001503 J03015 M32221 D00422 M81355 AB209776 BC004275 BC007612	38902	-	AK223290 AK293672 AK307721 TSC_hg19_v1_chr10_-_73611007 AK129790 J03077 AK057878 BC091483	38938	-	AK299184 TSC_hg19_v1_chr10_-_73611043	38964	-	AY563161|CDH23|64072|cadherin-related 23##AY563162|CDH23|64072|cadherin-related 23##NM_001171935|CDH23|64072|cadherin-related 23##NM_001171936|CDH23|64072|cadherin-related 23##AY563165|CDH23|64072|cadherin-related 23##AY563166|CDH23|64072|cadherin-related 23##NM_001171933|CDH23|64072|cadherin-related 23##NM_001171934|CDH23|64072|cadherin-related 23##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54##BT006849|PSAP|5660|prosaposin##CR456746|PSAP|5660|prosaposin##DQ893009|PSAP|5660|prosaposin##DQ896255|PSAP|5660|prosaposin##M60255|PSAP|5660|prosaposin##M60257|PSAP|5660|prosaposin##M60258|PSAP|5660|prosaposin##BC001503|PSAP|5660|prosaposin##J03015|PSAP|5660|prosaposin##M32221|PSAP|5660|prosaposin##D00422|PSAP|5660|prosaposin##M81355|PSAP|5660|prosaposin##AB209776|PSAP|5660|prosaposin##BC004275|PSAP|5660|prosaposin##BC007612|PSAP|5660|prosaposin##AK223290|PSAP|5660|prosaposin##AK293672|PSAP|5660|prosaposin##AK307721|PSAP|5660|prosaposin##AK129790|PSAP|5660|prosaposin##J03077|PSAP|5660|prosaposin##AK057878|PSAP|5660|prosaposin##BC091483|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin	0.0	
chr1	120808262	120808382	reg1035188.p1	4.358	+	TSC_hg19_v1_chr1_-_120612318 NM_001200001 NM_024408	-196007	-	TSC_hg19_v1_chr1_-_120612272 BC071562	-196056	-	TSC_hg19_v1_chr1_-_120612211 AK307843	-196116	-	NM_001100910	30682	+	L03419 L03420 TSC_hg19_v1_chr1_-_120935918 BC110416 AK308886	127587	-	AK291502 AK307244 AK311502 NM_001004340 NM_001017986 NM_001244910 TSC_hg19_v1_chr1_-_120935945	127630	-	NM_001200001|NOTCH2|4853|notch 2##NM_024408|NOTCH2|4853|notch 2##BC071562|NOTCH2|4853|notch 2##AK307843|NOTCH2|4853|notch 2##NM_001100910|FAM72B|653820|family with sequence similarity 72, member B##L03419|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##L03420|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##BC110416|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK308886|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK291502|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK307244|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##AK311502|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001004340|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001017986|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)##NM_001244910|FCGR1B|2210|Fc fragment of IgG, high affinity Ib, receptor (CD64)	0.08407	
chr15	33900987	33901093	reg1028927.p1	4.358	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	-297871	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-540805	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-889874	-	TSC_hg19_v1_chr15_-_34212524 BC037796	311518	-	AK095198 NM_012125	360048	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	430272	-	AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor	0.522254	CTCF.p2:15:0.522
chr2	132559748	132559928	reg1006242.p2	4.358	+	BC043584 NM_214461	-605	-	AF038169 NM_013310	-79775	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-274332	+	AK122643 NM_001508	614308	+	AY358628 BC017318 AK309849 AK075487 TSC_hg19_v1_chr2_-_133427783 AK130005 AK094501 AK123029	867865	-	NM_144586	868642	-	BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39##AY358628|LYPD1|116372|LY6/PLAUR domain containing 1##BC017318|LYPD1|116372|LY6/PLAUR domain containing 1##AK309849|LYPD1|116372|LY6/PLAUR domain containing 1##AK075487|LYPD1|116372|LY6/PLAUR domain containing 1##AK130005|LYPD1|116372|LY6/PLAUR domain containing 1##AK094501|LYPD1|116372|LY6/PLAUR domain containing 1##AK123029|LYPD1|116372|LY6/PLAUR domain containing 1##NM_144586|LYPD1|116372|LY6/PLAUR domain containing 1	0.019167	
chr2	222167708	222167821	reg1033598.p1	4.358	+	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-1675410	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-1705175	+	M13981 NM_002191 BC039076 BC006391 TSC_hg19_v1_chr2_+_220437031 BT006954 CU675381 DQ890602 DQ893773 M13144	-1730718	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	269246	-	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	991256	-	AK057009 NM_153038 BC109388	995148	+	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##M13981|INHA|3623|inhibin, alpha##NM_002191|INHA|3623|inhibin, alpha##BC039076|INHA|3623|inhibin, alpha##BC006391|INHA|3623|inhibin, alpha##BT006954|INHA|3623|inhibin, alpha##DQ890602|INHA|3623|inhibin, alpha##DQ893773|INHA|3623|inhibin, alpha##M13144|INHA|3623|inhibin, alpha##BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140	0.0	
chr3	178250377	178250497	reg1034201.p1	4.358	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1335378	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	-1335486	-	TSC_hg19_v1_chr3_-_176914267 BX648935	-1336187	-	BC017825 NM_181361	3786	+	AF209747 NM_005832	26115	+	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	539128	-	AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3	0.0	
chr10	119190809	119190989	reg1033276.p2	4.357	+	CU688476 TSC_hg19_v1_chr10_-_119134939 BC012186 BC028375 NM_173791 AK091746 AX747159 BC033019	-56018	-	NM_003054 BC030593 TSC_hg19_v1_chr10_+_119000626 AK314997 L23205 L09118 X71354 L14269 BC108927 BC108928	-190249	+	AB087138 AB464053 NM_181840	-233900	+	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	111017	-	AF301598 NM_001165924 NM_004098	111056	+	TSC_hg19_v1_chr10_+_119302713 AB463605	111844	+	BC012186|PDZD8|118987|PDZ domain containing 8##BC028375|PDZD8|118987|PDZ domain containing 8##NM_173791|PDZD8|118987|PDZ domain containing 8##AK091746|PDZD8|118987|PDZ domain containing 8##BC033019|PDZD8|118987|PDZ domain containing 8##NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AB087138|KCNK18|338567|potassium channel, subfamily K, member 18##NM_181840|KCNK18|338567|potassium channel, subfamily K, member 18##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AF301598|EMX2|2018|empty spiracles homeobox 2##NM_001165924|EMX2|2018|empty spiracles homeobox 2##NM_004098|EMX2|2018|empty spiracles homeobox 2	0.72293	CTCF.p2:-31:0.723
chr12	14115811	14115917	reg1030480.p2	4.357	+	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-766135	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-766147	+	NM_001423 U77085 TSC_hg19_v1_chr12_+_13349659 AK310798 AK308505 BC047300	-766226	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	17122	-	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	402771	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	422408	+	AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##NM_001423|EMP1|2012|epithelial membrane protein 1##U77085|EMP1|2012|epithelial membrane protein 1##AK310798|EMP1|2012|epithelial membrane protein 1##AK308505|EMP1|2012|epithelial membrane protein 1##BC047300|EMP1|2012|epithelial membrane protein 1##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein	0.087525	
chr22	36135874	36135983	reg1033885.p2	4.357	+	AB528803 AY014878 NM_030642	-22011	+	TSC_hg19_v1_chr22_+_36044482 BC038950 AY358210	-91428	+	TSC_hg19_v1_chr22_+_36044432 AY014879 NM_030641 BC047864 AX775805 AL834420 AK095881	-91492	+	AB463238 AB649123 AY960684 CU013159 CU013447 CU692956 DQ891720 DQ894897 DQ894898 TSC_hg19_v1_chr22_-_36236318	100363	-	CR456559 TSC_hg19_v1_chr22_-_36236341	100412	-	TSC_hg19_v1_chr22_-_36236476 AF229058 AL009266 AK314632 BC013115 BC025281 AK291460 NM_001031695 NM_001082576 NM_001082577 NM_014309	100597	-	AY014878|APOL5|80831|apolipoprotein L, 5##NM_030642|APOL5|80831|apolipoprotein L, 5##BC038950|APOL6|80830|apolipoprotein L, 6##AY358210|APOL6|80830|apolipoprotein L, 6##AY014879|APOL6|80830|apolipoprotein L, 6##NM_030641|APOL6|80830|apolipoprotein L, 6##BC047864|APOL6|80830|apolipoprotein L, 6##AL834420|APOL6|80830|apolipoprotein L, 6##AK095881|APOL6|80830|apolipoprotein L, 6##AY960684|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CU013159|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CU013447|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ891720|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ894897|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##DQ894898|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##CR456559|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AF229058|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AL009266|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK314632|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC013115|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##BC025281|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##AK291460|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001031695|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082576|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_001082577|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2##NM_014309|RBFOX2|23543|RNA binding protein, fox-1 homolog (C. elegans) 2	0.02231	
chr3	191106760	191106853	reg1031645.p2	4.357	+	AK090630 AX746546 NM_198152	-58482	-	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	-59640	+	AY398681 AY573933 BC128106 BC128107 NM_198184	-176485	+	AY858112 NM_001083308	72145	+	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	1020037	-	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	1338559	-	AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50##AY398681|OSTN|344901|osteocrin##AY573933|OSTN|344901|osteocrin##BC128106|OSTN|344901|osteocrin##BC128107|OSTN|344901|osteocrin##NM_198184|OSTN|344901|osteocrin##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12	0.984986	CTCF.p2:-6:0.985
chr3	59552312	59552476	reg1029904.p2	4.357	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-516634	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-516653	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-516686	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	1684696	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	1994817	+	BC047734 TSC_hg19_v1_chr3_+_61547294	1994892	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.0	
chr3	67408375	67408528	reg1033760.p2	4.357	+	NM_032505 AK096640 AK300397	-359723	+	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	-856987	-	AF381545 BC140907 NM_015541 AY730707	-857599	-	BC007716 BC047024 TSC_hg19_v1_chr3_-_67705027 AK294598 AK310527 BC068602 NM_001177599 NM_003848	296611	-	BC038210 TSC_hg19_v1_chr3_+_67705138 AL832184	296699	+	AY325114 NM_001252216	632282	+	NM_032505|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK096640|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AK300397|KBTBD8|84541|kelch repeat and BTB (POZ) domain containing 8##AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC007716|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC047024|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK294598|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AK310527|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##BC068602|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_001177599|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##NM_003848|SUCLG2|8801|succinate-CoA ligase, GDP-forming, beta subunit##AY325114|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1##NM_001252216|FAM19A1|407738|family with sequence similarity 19 (chemokine (C-C motif)-like), member A1	0.014389	
chrX	78514663	78514821	reg1027927.p1	4.357	+	AF345567 BC104922 BC104924 NM_032553	-88274	+	NM_014499 NM_198333 AK313218 AK292138 BC051875	-313870	+	NM_005296 AK314134	-511534	+	CR456875 CU691874 EU446983 AY359051 AB209310 BC040437 BC010511 TSC_hg19_v1_chrX_-_78622829 AK223327 AK303238 AF038953 BC034485	108041	-	AK313154 NM_001171581 NM_004867	108285	-	AK097514 NM_001109878 NM_001109879	755512	+	AF345567|GPR174|84636|G protein-coupled receptor 174##BC104922|GPR174|84636|G protein-coupled receptor 174##BC104924|GPR174|84636|G protein-coupled receptor 174##NM_032553|GPR174|84636|G protein-coupled receptor 174##NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##CR456875|ITM2A|9452|integral membrane protein 2A##EU446983|ITM2A|9452|integral membrane protein 2A##AY359051|ITM2A|9452|integral membrane protein 2A##AB209310|ITM2A|9452|integral membrane protein 2A##BC040437|ITM2A|9452|integral membrane protein 2A##BC010511|ITM2A|9452|integral membrane protein 2A##AK223327|ITM2A|9452|integral membrane protein 2A##AK303238|ITM2A|9452|integral membrane protein 2A##AF038953|ITM2A|9452|integral membrane protein 2A##BC034485|ITM2A|9452|integral membrane protein 2A##AK313154|ITM2A|9452|integral membrane protein 2A##NM_001171581|ITM2A|9452|integral membrane protein 2A##NM_004867|ITM2A|9452|integral membrane protein 2A##AK097514|TBX22|50945|T-box 22##NM_001109878|TBX22|50945|T-box 22##NM_001109879|TBX22|50945|T-box 22	0.0	
chr10	112373774	112373955	reg1029352.p2	4.356	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-29749	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-46372	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-116113	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	30265	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	257748	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	257850	+	AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)	0.0	
chr10	36070688	36070807	reg1032832.p1	4.356	+	AB587328 AB043703 NM_031866	-140388	-	AK074504 NM_153368	-176410	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	-444953	+	AF269087 NM_052997	1344037	+	NM_001190489	1821111	-	BC132915 BC132917 BC110869 BC021819 AJ491695 AJ492196 NM_021045 TSC_hg19_v1_chr10_-_38146539	2075671	-	AB043703|FZD8|8325|frizzled family receptor 8##NM_031866|FZD8|8325|frizzled family receptor 8##AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AF269087|ANKRD30A|91074|ankyrin repeat domain 30A##NM_052997|ANKRD30A|91074|ankyrin repeat domain 30A##NM_001190489|MTRNR2L7|100288485|MT-RNR2-like 7##BC132915|ZNF248|57209|zinc finger protein 248##BC132917|ZNF248|57209|zinc finger protein 248##BC110869|ZNF248|57209|zinc finger protein 248##BC021819|ZNF248|57209|zinc finger protein 248##AJ491695|ZNF248|57209|zinc finger protein 248##AJ492196|ZNF248|57209|zinc finger protein 248##NM_021045|ZNF248|57209|zinc finger protein 248	0.981601	CTCF.p2:3:0.982
chr10	48848298	48848433	reg1034820.p1	4.356	+	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-20423	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	-20756	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	-41442	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	359456	-	CR749241 NM_001018071	634561	-	TSC_hg19_v1_chr10_+_49514722 AK292523	666421	+	BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##AK292523|MAPK8|5599|mitogen-activated protein kinase 8	0.979716	CTCF.p2:-11:0.980
chr15	21927561	21927640	reg1005325.p2	4.356	+	NM_207355 BC066981	-855622	-	NM_001145004	-1180487	-	TSC_hg19_v1_chr15_-_20711449 BC070076 BC033888 BC094757	-1216163	-	NM_207355 BC066981	155538	-	BC136985 NM_001004719	440877	+	BC136597 BC136598 NM_001005241 DQ786223	454845	+	NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##NM_001145004|GOLGA6L6|727832|golgin A6 family-like 6##BC033888|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##BC094757|HERC2P3|283755|hect domain and RLD 2 pseudogene 3##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4	0.0	
chr17	899872	899990	reg1027272.p1	4.356	+	TSC_hg19_v1_chr17_-_882986 AB590045 NM_022463	-16931	-	BC009327 AK302073 NM_001205319	-132613	-	BC011550 TSC_hg19_v1_chr17_+_685611 BC050614 AK225128 AB590841 CU679954 CU690740	-214317	+	TSC_hg19_v1_chr17_+_900368 BC002324 NM_013337 AK000830 AK225453 AF155330	424	+	TSC_hg19_v1_chr17_-_982210 AK299909	82294	-	AK295191 TSC_hg19_v1_chr17_-_1012323 NM_001092 BC036807	112378	-	NM_022463|NXN|64359|nucleoredoxin##BC009327|NXN|64359|nucleoredoxin##AK302073|NXN|64359|nucleoredoxin##NM_001205319|NXN|64359|nucleoredoxin##BC011550|RNMTL1|55178|RNA methyltransferase like 1##BC050614|RNMTL1|55178|RNA methyltransferase like 1##AK225128|RNMTL1|55178|RNA methyltransferase like 1##BC002324|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##NM_013337|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK000830|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK225453|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AF155330|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK299909|ABR|29|active BCR-related gene##AK295191|ABR|29|active BCR-related gene##NM_001092|ABR|29|active BCR-related gene##BC036807|ABR|29|active BCR-related gene	0.0	
chr20	51774695	51774809	reg1033109.p1	4.356	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	-184974	+	BX640770 NM_173485	-185807	+	BC012759 BC041622 NM_018197 NM_022088 NM_199426 NM_199427	-966229	-	AK302570 NM_001193421	27069	+	AF041259 NM_006526	424883	-	TSC_hg19_v1_chr20_-_52210810 AK290350	436047	-	AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2##BC012759|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC041622|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_018197|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_022088|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199426|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199427|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK290350|ZNF217|7764|zinc finger protein 217	0.998634	CTCF.p2:23:0.999
chr6	106049682	106049785	reg1026997.p2	4.356	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-198738	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-198775	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-198887	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	484463	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	484502	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	497071	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.022972	
chr7	8229934	8230027	reg1005301.p1	4.356	+	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	-221547	+	BC009868 NM_002947	-471743	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-549607	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	71736	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	71811	-	TSC_hg19_v1_chr7_-_8302174 U38260 L01100 BC008640 BC005922 NM_004968	72193	-	NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa##U38260|ICA1|3382|islet cell autoantigen 1, 69kDa##L01100|ICA1|3382|islet cell autoantigen 1, 69kDa##BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa##BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr8	144650629	144650795	reg1024234.p1	4.356	+	NM_024736 AY008304 BC008904 TSC_hg19_v1_chr8_+_144640515 AK303615 AK022212 AK123985 AK096216 BC069000	-10206	+	AK291817 NM_001166237	-15156	+	TSC_hg19_v1_chr8_-_144623640 NM_015117	-27080	-	TSC_hg19_v1_chr8_-_144650884 AF289596	191	-	TSC_hg19_v1_chr8_-_144651064 AK292180	343	-	TSC_hg19_v1_chr8_-_144654943 NM_001100878	4221	-	NM_024736|GSDMD|79792|gasdermin D##AY008304|GSDMD|79792|gasdermin D##BC008904|GSDMD|79792|gasdermin D##AK303615|GSDMD|79792|gasdermin D##AK022212|GSDMD|79792|gasdermin D##AK123985|GSDMD|79792|gasdermin D##AK096216|GSDMD|79792|gasdermin D##BC069000|GSDMD|79792|gasdermin D##AK291817|GSDMD|79792|gasdermin D##NM_001166237|GSDMD|79792|gasdermin D##NM_015117|ZC3H3|23144|zinc finger CCCH-type containing 3##AF289596|C8orf73|642475|chromosome 8 open reading frame 73##AK292180|C8orf73|642475|chromosome 8 open reading frame 73##NM_001100878|C8orf73|642475|chromosome 8 open reading frame 73	0.0	
chr8	99341209	99341341	reg1032742.p1	4.356	+	BC132687 BC144055 TSC_hg19_v1_chr8_-_99306600 AK024017 NM_024759	-34676	-	BC011529 NM_015029	-211208	+	TSC_hg19_v1_chr8_+_99129543 NM_001145860 NM_001145861 X99302 AK291434	-211737	+	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	98071	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	496572	-	NM_001142462 NM_053001 TSC_hg19_v1_chr8_+_99956669 AK074518 AK291491 AK310994 BC016936 AY038073	615382	+	BC132687|NIPAL2|79815|NIPA-like domain containing 2##BC144055|NIPAL2|79815|NIPA-like domain containing 2##AK024017|NIPAL2|79815|NIPA-like domain containing 2##NM_024759|NIPAL2|79815|NIPA-like domain containing 2##BC011529|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015029|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001145860|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##NM_001145861|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##X99302|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##AK291434|POP1|10940|processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)##BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3##NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)##NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)##AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)##AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)##AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)##BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)##AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)	0.981111	CTCF.p2:-16:0.981
chr9	38362909	38363066	reg1003688.p1	4.356	+	X75342 NM_003028 TSC_hg19_v1_chr9_-_38069225 BC094765	-293746	-	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	-293846	-	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	-458621	-	TSC_hg19_v1_chr9_+_38392669 NM_000692	29686	+	TSC_hg19_v1_chr9_+_38392698 AK313344	29710	+	TSC_hg19_v1_chr9_+_38392760 AK297020 BC001619 AK225950	29755	+	X75342|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_003028|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B##AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK313344|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK297020|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##BC001619|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK225950|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1	0.0	
chrX	114960733	114960914	reg1006409.p2	4.356	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-132955	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-163781	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-165217	+	BC003645 TSC_hg19_v1_chrX_-_115085443	124616	-	AK313927 NM_000686 X87723 U16957	341172	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	606944	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.0	
chr11	1314962	1315044	reg1031757.p1	4.355	+	TSC_hg19_v1_chr11_+_1244340 AF086604	-70667	+	TSC_hg19_v1_chr11_+_1244295 NM_002458 AK310939	-70707	+	TSC_hg19_v1_chr11_+_1213469 Z48314	-101529	+	TSC_hg19_v1_chr11_-_1330680 AY730683 CR533477 AB590101 DQ891802 DQ894986 AM393373	15703	-	BC018272 BC012057 TSC_hg19_v1_chr11_-_1330832 AB209541 AJ242972 AL136835	15820	-	TSC_hg19_v1_chr11_-_1330861 AK096693 BC004420 AK090850 AK315592	15850	-	AF086604|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##NM_002458|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##AK310939|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##Z48314|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AY730683|TOLLIP|54472|toll interacting protein##CR533477|TOLLIP|54472|toll interacting protein##DQ891802|TOLLIP|54472|toll interacting protein##DQ894986|TOLLIP|54472|toll interacting protein##AM393373|TOLLIP|54472|toll interacting protein##BC018272|TOLLIP|54472|toll interacting protein##BC012057|TOLLIP|54472|toll interacting protein##AB209541|TOLLIP|54472|toll interacting protein##AJ242972|TOLLIP|54472|toll interacting protein##AL136835|TOLLIP|54472|toll interacting protein##AK096693|TOLLIP|54472|toll interacting protein##BC004420|TOLLIP|54472|toll interacting protein##AK090850|TOLLIP|54472|toll interacting protein##AK315592|TOLLIP|54472|toll interacting protein	0.847187	CTCF.p2:18:0.847
chr5	78024042	78024222	reg1028739.p2	4.355	+	TSC_hg19_v1_chr5_-_77944584 NM_005779	-79566	-	CR936660 TSC_hg19_v1_chr5_-_77845052	-179109	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-217936	-	J05225 TSC_hg19_v1_chr5_-_78281101	256956	-	AK290865 TSC_hg19_v1_chr5_-_78281134	257001	-	TSC_hg19_v1_chr5_-_78281142 AK314903	257014	-	NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B##AK314903|ARSB|411|arylsulfatase B	0.0	
chr6	7188834	7188990	reg1027354.p1	4.355	+	BX647723 TSC_hg19_v1_chr6_+_7108910	-80009	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	-80689	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	-80877	+	BT007387 CR456961 AB464204 DQ892751 EU176743 TSC_hg19_v1_chr6_-_7313433 Z12830 AK075562 AK222762 AK222809 AK291550 AK312653 CR936719 BC007710 NM_003144	124534	-	AF414185 NM_001170692 NM_001170693 NM_205864 TSC_hg19_v1_chr6_-_7389974	201055	-	TSC_hg19_v1_chr6_+_7390042 AY094356 AK314467 BC006104 NM_031480 AK054568	201186	+	BX647723|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##BT007387|SSR1|6745|signal sequence receptor, alpha##CR456961|SSR1|6745|signal sequence receptor, alpha##DQ892751|SSR1|6745|signal sequence receptor, alpha##EU176743|SSR1|6745|signal sequence receptor, alpha##Z12830|SSR1|6745|signal sequence receptor, alpha##AK075562|SSR1|6745|signal sequence receptor, alpha##AK222762|SSR1|6745|signal sequence receptor, alpha##AK222809|SSR1|6745|signal sequence receptor, alpha##AK291550|SSR1|6745|signal sequence receptor, alpha##AK312653|SSR1|6745|signal sequence receptor, alpha##CR936719|SSR1|6745|signal sequence receptor, alpha##BC007710|SSR1|6745|signal sequence receptor, alpha##NM_003144|SSR1|6745|signal sequence receptor, alpha##AF414185|CAGE1|285782|cancer antigen 1##NM_001170692|CAGE1|285782|cancer antigen 1##NM_001170693|CAGE1|285782|cancer antigen 1##NM_205864|CAGE1|285782|cancer antigen 1##AY094356|RIOK1|83732|RIO kinase 1 (yeast)##AK314467|RIOK1|83732|RIO kinase 1 (yeast)##BC006104|RIOK1|83732|RIO kinase 1 (yeast)##NM_031480|RIOK1|83732|RIO kinase 1 (yeast)##AK054568|RIOK1|83732|RIO kinase 1 (yeast)	0.0	
chr6_cox_hap2	70570	70665	reg1028906.p1	4.355	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.30106	CTCF.p2:30:0.301
chrX	70734290	70734470	reg1034628.p1	4.355	+	D90359 NM_004606 NM_138923 TSC_hg19_v1_chrX_+_70586179 AK310201 AB300418	-148234	+	AF140690 NM_012278 BC108901 AF110225 AB529088	-212740	+	TSC_hg19_v1_chrX_+_70503534 U02493 U89867	-230837	+	NM_181672 NM_181673 TSC_hg19_v1_chrX_+_70752924 AL833085	18545	+	TSC_hg19_v1_chrX_+_70752953 AK026724 AK300267 BX537844 BC038180 BC014434	18583	+	TSC_hg19_v1_chrX_+_70765496 AL050366	31142	+	D90359|TAF1|6872|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa##NM_004606|TAF1|6872|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa##NM_138923|TAF1|6872|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa##AK310201|TAF1|6872|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa##AB300418|TAF1|6872|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa##AF140690|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2##NM_012278|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2##BC108901|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2##AF110225|ITGB1BP2|26548|integrin beta 1 binding protein (melusin) 2##U02493|NONO|4841|non-POU domain containing, octamer-binding##U89867|NONO|4841|non-POU domain containing, octamer-binding##NM_181672|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##NM_181673|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##AL833085|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##AK300267|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BX537844|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BC038180|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BC014434|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)	0.0	
chr10	86543183	86543279	reg1029465.p1	4.354	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-358536	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-411613	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-454837	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	1583032	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	1738263	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	1738299	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.998843	CTCF.p2:6:0.999
chr12	10710288	10710411	reg1030911.p1	4.354	+	BC012550 NM_213657 NM_213658 AK310992	-103101	-	X54867 X54868 AF461812 NM_002259 NM_007328	-104396	-	BC106069 AK295525 AF260134 AF350017 NM_002260 X54869 Y13055 AF461157 BC093644 BC112039	-121770	-	AB528590 TSC_hg19_v1_chr12_-_10766200 BC010905 AK022720 AK001154 BC000928 AK096106 AF165518 NM_018048	55820	-	AF251059 NM_018423	116541	-	TSC_hg19_v1_chr12_-_10875782 AB463536 DQ892686 DQ895930	165393	-	BC012550|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_213657|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_213658|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##AK310992|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##X54867|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##X54868|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##AF461812|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_002259|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_007328|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##BC106069|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AK295525|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AF260134|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AF350017|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##NM_002260|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##X54869|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##Y13055|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##AF461157|KLRC3|3823|killer cell lectin-like receptor subfamily C, member 3##BC093644|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##BC112039|KLRC2|3822|killer cell lectin-like receptor subfamily C, member 2##BC010905|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK022720|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK001154|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK096106|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AF165518|MAGOHB|55110|mago-nashi homolog B (Drosophila)##NM_018048|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AF251059|STYK1|55359|serine/threonine/tyrosine kinase 1##NM_018423|STYK1|55359|serine/threonine/tyrosine kinase 1##DQ892686|CSDA|8531|cold shock domain protein A##DQ895930|CSDA|8531|cold shock domain protein A	0.0	
chr12	65707656	65707771	reg1030674.p1	4.354	+	TSC_hg19_v1_chr12_+_65672705 NM_001193461	-34989	+	NM_001031679 NM_001193460 NM_198080 TSC_hg19_v1_chr12_+_65672483 AK316365 AK293084 AK299065 AY358229 BX648776 AL833622 BC040053	-35188	+	TSC_hg19_v1_chr12_+_65563362 AK312473 NM_001167614 NM_014319 AK304317 AF112299	-144359	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	510494	+	TSC_hg19_v1_chr12_+_66218605 AK311399	510894	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	511300	+	NM_001193461|MSRB3|253827|methionine sulfoxide reductase B3##NM_001031679|MSRB3|253827|methionine sulfoxide reductase B3##NM_001193460|MSRB3|253827|methionine sulfoxide reductase B3##NM_198080|MSRB3|253827|methionine sulfoxide reductase B3##AK316365|MSRB3|253827|methionine sulfoxide reductase B3##AK293084|MSRB3|253827|methionine sulfoxide reductase B3##AK299065|MSRB3|253827|methionine sulfoxide reductase B3##AY358229|MSRB3|253827|methionine sulfoxide reductase B3##BX648776|MSRB3|253827|methionine sulfoxide reductase B3##AL833622|MSRB3|253827|methionine sulfoxide reductase B3##BC040053|MSRB3|253827|methionine sulfoxide reductase B3##AK312473|LEMD3|23592|LEM domain containing 3##NM_001167614|LEMD3|23592|LEM domain containing 3##NM_014319|LEMD3|23592|LEM domain containing 3##AK304317|LEMD3|23592|LEM domain containing 3##AF112299|LEMD3|23592|LEM domain containing 3##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2	0.999409	CTCF.p2:-29:0.999
chr18	42292135	42292220	reg1032207.p1	4.354	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-31309	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-32063	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1434748	-	NM_001242692 AK292422	500775	+	AF349446 NM_007163	902588	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	1011927	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.135917	
chr2	62115866	62116047	reg1030608.p2	4.354	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-170	-	TSC_hg19_v1_chr2_-_62115733 BC106933 BC106934 AF026291	-222	-	AK129860 TSC_hg19_v1_chr2_-_62115719 AK295330	-238	-	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	16873	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	307310	+	BC047439 AK091902 AX747245 NM_198276	617583	-	AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106933|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106934|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AF026291|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK129860|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK295330|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17	0.0	
chr5	14448563	14448685	reg1032657.p1	4.354	+	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	-304952	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-436754	-	AX800026 AY045575 NM_001369	-504036	-	TSC_hg19_v1_chr5_+_14488527 AK131423	39915	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	133276	+	TSC_hg19_v1_chr5_+_14581949 AK001989 BC011524 CU679940	133340	+	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A##AK001989|FAM105A|54491|family with sequence similarity 105, member A##BC011524|FAM105A|54491|family with sequence similarity 105, member A	0.383055	CTCF.p2:-17:0.383
chr5	16489466	16489572	reg1031377.p1	4.354	+	TSC_hg19_v1_chr5_-_16465884 BC010545 BC008752 NM_033414 AY046059	-23643	-	NM_001102562	-309623	-	TSC_hg19_v1_chr5_+_15500770 AF199356 AB463041	-988743	+	NM_019000	19587	-	TSC_hg19_v1_chr5_-_16617097 BC053326 AK025808 NM_001034850	127606	-	TSC_hg19_v1_chr5_-_16738346 AK295736	248901	-	BC010545|ZNF622|90441|zinc finger protein 622##BC008752|ZNF622|90441|zinc finger protein 622##NM_033414|ZNF622|90441|zinc finger protein 622##AY046059|ZNF622|90441|zinc finger protein 622##NM_001102562|MARCH11|441061|membrane-associated ring finger (C3HC4) 11##AF199356|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_019000|FAM134B|54463|family with sequence similarity 134, member B##BC053326|FAM134B|54463|family with sequence similarity 134, member B##AK025808|FAM134B|54463|family with sequence similarity 134, member B##NM_001034850|FAM134B|54463|family with sequence similarity 134, member B##AK295736|MYO10|4651|myosin X	0.0	
chr8	10899575	10899687	reg1029933.p1	4.354	+	TSC_hg19_v1_chr8_-_10697386 AF205718 AF418553 AJ344104	-202222	-	AY238941 AY523566 BC093762 BC143382 NM_017884 TSC_hg19_v1_chr8_-_10697379 AY029161 AK313715 BC015479 AK296724	-202297	-	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	-311647	-	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	159234	-	TSC_hg19_v1_chr8_+_11141999 BC034990 NM_015458	242381	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	242724	+	AF205718|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF418553|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ344104|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY238941|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY523566|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC093762|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC143382|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##NM_017884|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AK313715|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC015479|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7##AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##BC034990|MTMR9|66036|myotubularin related protein 9##NM_015458|MTMR9|66036|myotubularin related protein 9##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9	0.022841	
chr9	70145919	70146035	reg1033288.p1	4.354	+	AL136793 NM_001098805	-763997	+	AF265442 BC069006 AK293173 NM_001085457	-883423	-	NM_001085476	-943774	-	NM_001126334	32837	-	NM_001099279 NM_199244	283753	-	CU688346 TSC_hg19_v1_chr9_-_70490092	344104	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.0	
chr1	163331045	163331155	reg1033377.p1	4.353	+	NM_031423 NM_145697 TSC_hg19_v1_chr1_+_163291746 AK093348 AX748068 AF326731 BC008489 AB050577	-39324	+	TSC_hg19_v1_chr1_-_163291574 BC032239	-39539	-	TSC_hg19_v1_chr1_-_163172866 NM_003617	-158188	-	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	1197491	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	1197886	+	TSC_hg19_v1_chr1_+_164818083 AK022520	1487023	+	NM_031423|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_145697|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK093348|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AF326731|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC008489|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AB050577|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_003617|RGS5|8490|regulator of G-protein signaling 5##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1	0.073596	
chr11	9142660	9142750	reg1031811.p2	4.353	+	BC111690 AK131552 AK123039 NM_001170690 NM_020974 TSC_hg19_v1_chr11_-_9113185	-29567	-	BC008835 TSC_hg19_v1_chr11_-_9025549 AK024750 AK098694 AK296484 NM_020645	-117142	-	BC040124 TSC_hg19_v1_chr11_-_8986002	-156696	-	TSC_hg19_v1_chr11_-_9225783 AK302478	83116	-	AB029014 TSC_hg19_v1_chr11_-_9286891 BC071596 NM_001243254 NM_015213	144157	-	AK303339 TSC_hg19_v1_chr11_-_9336043 BC064366 BC091524	193354	-	BC111690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK131552|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK123039|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_001170690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_020974|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##BC008835|NRIP3|56675|nuclear receptor interacting protein 3##AK024750|NRIP3|56675|nuclear receptor interacting protein 3##AK098694|NRIP3|56675|nuclear receptor interacting protein 3##AK296484|NRIP3|56675|nuclear receptor interacting protein 3##NM_020645|NRIP3|56675|nuclear receptor interacting protein 3##BC040124|TMEM9B|56674|TMEM9 domain family, member B##AK302478|DENND5A|23258|DENN/MADD domain containing 5A##AB029014|DENND5A|23258|DENN/MADD domain containing 5A##BC071596|DENND5A|23258|DENN/MADD domain containing 5A##NM_001243254|DENND5A|23258|DENN/MADD domain containing 5A##NM_015213|DENND5A|23258|DENN/MADD domain containing 5A##AK303339|TMEM41B|440026|transmembrane protein 41B##BC064366|TMEM41B|440026|transmembrane protein 41B##BC091524|TMEM41B|440026|transmembrane protein 41B	0.663437	CTCF.p2:-22:0.618
chr12	41658226	41658316	reg1034088.p1	4.353	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	-76063	+	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	-571989	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	-1039412	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	173316	+	TSC_hg19_v1_chr12_-_42538503 AK125141 NM_001099650 NM_173601 BC030023	880308	-	CU691510 EU446625 EU446756 AB527838 TSC_hg19_v1_chr12_-_42632024 BC037777 AK127531 AK291355 AK296191 AK294260 NM_001190977	973764	-	NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4##AK125141|GXYLT1|283464|glucoside xylosyltransferase 1##NM_001099650|GXYLT1|283464|glucoside xylosyltransferase 1##NM_173601|GXYLT1|283464|glucoside xylosyltransferase 1##BC030023|GXYLT1|283464|glucoside xylosyltransferase 1##EU446625|YAF2|10138|YY1 associated factor 2##EU446756|YAF2|10138|YY1 associated factor 2##BC037777|YAF2|10138|YY1 associated factor 2##AK127531|YAF2|10138|YY1 associated factor 2##AK291355|YAF2|10138|YY1 associated factor 2##AK296191|YAF2|10138|YY1 associated factor 2##AK294260|YAF2|10138|YY1 associated factor 2##NM_001190977|YAF2|10138|YY1 associated factor 2	0.186403	
chr15	73419795	73419896	reg1030209.p1	4.353	+	NM_001172623 NM_001172624 NM_002499 U61262 U72391 BC117161 BC143270 BC143271 BC143279 AB528479	-74925	+	TSC_hg19_v1_chr15_-_73076118 AK055526 NM_031284	-343722	-	BC044589 TSC_hg19_v1_chr15_-_73076072	-343774	-	TSC_hg19_v1_chr15_-_73661207 AJ132429 DQ854814	241362	-	AJ238850 NM_005477	241759	-	NM_001042367 AK131030 BC055412	315664	+	NM_001172623|NEO1|4756|neogenin 1##NM_001172624|NEO1|4756|neogenin 1##NM_002499|NEO1|4756|neogenin 1##U61262|NEO1|4756|neogenin 1##U72391|NEO1|4756|neogenin 1##BC117161|NEO1|4756|neogenin 1##BC143270|NEO1|4756|neogenin 1##BC143271|NEO1|4756|neogenin 1##BC143279|NEO1|4756|neogenin 1##AK055526|ADPGK|83440|ADP-dependent glucokinase##NM_031284|ADPGK|83440|ADP-dependent glucokinase##BC044589|ADPGK|83440|ADP-dependent glucokinase##AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60##AK131030|C15orf60|283677|chromosome 15 open reading frame 60##BC055412|C15orf60|283677|chromosome 15 open reading frame 60	0.111516	
chr19	7242772	7242952	reg1026190.p1	4.353	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-143311	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-173147	+	AK315405 NM_001044387 NM_001044388 NM_024341	-173400	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	51098	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	217145	+	TSC_hg19_v1_chr19_+_7460061 AB011093	217215	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr20	46989210	46989376	reg1029524.p2	4.353	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-573975	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-574541	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-858609	+	AB037836 TSC_hg19_v1_chr20_-_47444291	454993	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	455146	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	549025	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr4	40230366	40230547	reg1017930.p1	4.353	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-31815	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-171924	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-250863	-	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	106989	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	286128	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	287502	-	NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47	0.0	
chr12	12714045	12714168	reg1030579.p1	4.352	+	TSC_hg19_v1_chr12_+_12510051 NM_058169 AK075028 BC013668 AY037865 AY037866 DQ891778 DQ894962 CU680646	-203941	+	AY358563 TSC_hg19_v1_chr12_-_12503210 AK023622 NM_018050 AK001160 BC032998	-210934	-	BC117136 BC126405 BC143725 AF074264 NM_002336 TSC_hg19_v1_chr12_-_12419947	-294264	-	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	1294	-	TSC_hg19_v1_chr12_+_12764831 BC106052 AF039081 NM_001310 AK307202	50689	+	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	50777	+	NM_058169|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AK075028|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##BC013668|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037865|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037866|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ891778|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ894962|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY358563|MANSC1|54682|MANSC domain containing 1##AK023622|MANSC1|54682|MANSC domain containing 1##NM_018050|MANSC1|54682|MANSC domain containing 1##AK001160|MANSC1|54682|MANSC domain containing 1##BC032998|MANSC1|54682|MANSC domain containing 1##BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6##BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6##BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6##AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6##NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6##AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16##BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2##AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2##AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2##BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2	0.0	
chr1	28199250	28199430	reg1035064.p1	4.352	+	CR749321 BC132692 BC133049 NM_001039477 NM_001105556 NM_004848 TSC_hg19_v1_chr1_+_28199054 AK303141 HQ258751 BC031655 AK303090	-268	+	AF126488 AX775985 TSC_hg19_v1_chr1_+_28157335 AK313814 AB464098 U14575	-41999	+	TSC_hg19_v1_chr1_+_28157334 AF061958 AK292077 AK297771 AK304619 NM_002713 NM_138558 AK307570 BC093017	-42012	+	CR450348 DQ892352 DQ895821 TSC_hg19_v1_chr1_-_28241083 J05249 BC001630 AK300691 AK312956 AK296898 AK298759 BC012157	41709	-	TSC_hg19_v1_chr1_-_28241258 BC021257 NM_002946	41924	-	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	62221	+	CR749321|C1orf38|9473|chromosome 1 open reading frame 38##BC132692|C1orf38|9473|chromosome 1 open reading frame 38##BC133049|C1orf38|9473|chromosome 1 open reading frame 38##NM_001039477|C1orf38|9473|chromosome 1 open reading frame 38##NM_001105556|C1orf38|9473|chromosome 1 open reading frame 38##NM_004848|C1orf38|9473|chromosome 1 open reading frame 38##AK303141|C1orf38|9473|chromosome 1 open reading frame 38##HQ258751|C1orf38|9473|chromosome 1 open reading frame 38##BC031655|C1orf38|9473|chromosome 1 open reading frame 38##AK303090|C1orf38|9473|chromosome 1 open reading frame 38##AF126488|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AX775985|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK313814|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##U14575|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AF061958|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK292077|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK297771|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK304619|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_002713|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_138558|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK307570|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##BC093017|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##CR450348|RPA2|6118|replication protein A2, 32kDa##DQ892352|RPA2|6118|replication protein A2, 32kDa##DQ895821|RPA2|6118|replication protein A2, 32kDa##J05249|RPA2|6118|replication protein A2, 32kDa##BC001630|RPA2|6118|replication protein A2, 32kDa##AK300691|RPA2|6118|replication protein A2, 32kDa##AK312956|RPA2|6118|replication protein A2, 32kDa##AK298759|RPA2|6118|replication protein A2, 32kDa##BC012157|RPA2|6118|replication protein A2, 32kDa##BC021257|RPA2|6118|replication protein A2, 32kDa##NM_002946|RPA2|6118|replication protein A2, 32kDa##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	0.0	
chr13	113295348	113295528	reg1002864.p2	4.352	+	TSC_hg19_v1_chr13_-_113260770 AK125472	-34671	-	TSC_hg19_v1_chr13_-_113242484 AK314785	-52947	-	TSC_hg19_v1_chr13_-_113242468 BC046634 NM_006322	-52965	-	AK129953 NM_207440	5919	+	TSC_hg19_v1_chr13_-_113344130 AK057085	48668	-	TSC_hg19_v1_chr13_+_113344493 NM_015205 NM_032189	49141	+	AK314785|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC046634|TUBGCP3|10426|tubulin, gamma complex associated protein 3##NM_006322|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK129953|C13orf35|400165|chromosome 13 open reading frame 35##NM_207440|C13orf35|400165|chromosome 13 open reading frame 35##AK057085|LOC440149|440149|uncharacterized LOC440149##NM_015205|ATP11A|23250|ATPase, class VI, type 11A##NM_032189|ATP11A|23250|ATPase, class VI, type 11A	0.0	
chr8	39130557	39130659	reg1032313.p1	4.352	+	NM_145004 AK300148 AY172952 AY358739 AK313864 BC026169 BC030698 BC034975 AK122608 BC028702 BC030014 BC026085 DQ890910 DQ894061 CU693126	-165438	+	TSC_hg19_v1_chr8_+_38854524 BC126406 BC143923 BC143924 AF495383	-276062	+	TSC_hg19_v1_chr8_+_38854491 BC027996 NM_003816 U41766	-276132	+	NM_001190956 NM_014237 AK313961 AY358321 BC070279 BC034624 CU687082 AJ133004 BC121045 BC121046 AK225744	311509	+	X99374 CU687896 CU689996 DQ891615 DQ894807 AJ133005 U52370 BC034957 BC064547 AK301734 U38805 NM_001464	565132	-	NM_002164 AK313259 BC027882 X17668 AY221100 CU693308 JF772862	640776	+	NM_145004|ADAM32|203102|ADAM metallopeptidase domain 32##AK300148|ADAM32|203102|ADAM metallopeptidase domain 32##AY172952|ADAM32|203102|ADAM metallopeptidase domain 32##AY358739|ADAM32|203102|ADAM metallopeptidase domain 32##AK313864|ADAM32|203102|ADAM metallopeptidase domain 32##BC026169|ADAM32|203102|ADAM metallopeptidase domain 32##BC030698|ADAM32|203102|ADAM metallopeptidase domain 32##BC034975|ADAM32|203102|ADAM metallopeptidase domain 32##AK122608|ADAM32|203102|ADAM metallopeptidase domain 32##BC028702|ADAM32|203102|ADAM metallopeptidase domain 32##BC030014|ADAM32|203102|ADAM metallopeptidase domain 32##BC026085|ADAM32|203102|ADAM metallopeptidase domain 32##DQ890910|ADAM32|203102|ADAM metallopeptidase domain 32##DQ894061|ADAM32|203102|ADAM metallopeptidase domain 32##BC126406|ADAM9|8754|ADAM metallopeptidase domain 9##BC143923|ADAM9|8754|ADAM metallopeptidase domain 9##BC143924|ADAM9|8754|ADAM metallopeptidase domain 9##AF495383|ADAM9|8754|ADAM metallopeptidase domain 9##BC027996|ADAM9|8754|ADAM metallopeptidase domain 9##NM_003816|ADAM9|8754|ADAM metallopeptidase domain 9##U41766|ADAM9|8754|ADAM metallopeptidase domain 9##NM_001190956|ADAM18|8749|ADAM metallopeptidase domain 18##NM_014237|ADAM18|8749|ADAM metallopeptidase domain 18##AK313961|ADAM18|8749|ADAM metallopeptidase domain 18##AY358321|ADAM18|8749|ADAM metallopeptidase domain 18##BC070279|ADAM18|8749|ADAM metallopeptidase domain 18##BC034624|ADAM18|8749|ADAM metallopeptidase domain 18##AJ133004|ADAM18|8749|ADAM metallopeptidase domain 18##BC121045|ADAM18|8749|ADAM metallopeptidase domain 18##BC121046|ADAM18|8749|ADAM metallopeptidase domain 18##AK225744|ADAM18|8749|ADAM metallopeptidase domain 18##X99374|ADAM2|2515|ADAM metallopeptidase domain 2##DQ891615|ADAM2|2515|ADAM metallopeptidase domain 2##DQ894807|ADAM2|2515|ADAM metallopeptidase domain 2##AJ133005|ADAM2|2515|ADAM metallopeptidase domain 2##U52370|ADAM2|2515|ADAM metallopeptidase domain 2##BC034957|ADAM2|2515|ADAM metallopeptidase domain 2##BC064547|ADAM2|2515|ADAM metallopeptidase domain 2##AK301734|ADAM2|2515|ADAM metallopeptidase domain 2##U38805|ADAM2|2515|ADAM metallopeptidase domain 2##NM_001464|ADAM2|2515|ADAM metallopeptidase domain 2##NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1##AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1##X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1##AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1##JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1	0.690573	CTCF.p2:26:0.691
chrX	148613173	148613293	reg1033123.p2	4.352	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	-26459	-	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-812621	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-1031045	+	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	9197	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	9361	+	AK300334 NM_001171909	12832	+	AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A##AK300334|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171909|CXorf40A|91966|chromosome X open reading frame 40A	0.993154	CTCF.p2:5:0.993
chr10	98047220	98047401	reg1028701.p1	4.351	+	AM180327 AM180328 AM180329 AM180330 AM180331 AM180332 AM180333 AM180334 AM180335 AM180336 AM180337 AM180338 AM180339 AM180340 AM180341 AM180342 AM180343 AM180344 AM180345 AM180346 BC018906 BC110298 AK027779 AF068180 AF068181 AK225546 NM_001114094 NM_013314	-16067	-	BC109045 BC109046 TSC_hg19_v1_chr10_+_97889812 AK095317 BC030967	-157568	+	TSC_hg19_v1_chr10_+_97889471 CR627437 NM_014803 BC011627	-157814	+	NM_001017520 NM_004088 AB046378 AK313615 M26144 BC012920 AK223317 DQ891465 DQ894645	16858	+	AF367761 NM_001040102 NM_001040103 NM_033207	71764	-	AB384048 BC113577 BC112341 BC112366 AB023149 BC013871 BC030548 TSC_hg19_v1_chr10_-_98273674 AK026106 NM_012465	226253	-	AM180327|BLNK|29760|B-cell linker##AM180328|BLNK|29760|B-cell linker##AM180329|BLNK|29760|B-cell linker##AM180330|BLNK|29760|B-cell linker##AM180331|BLNK|29760|B-cell linker##AM180332|BLNK|29760|B-cell linker##AM180333|BLNK|29760|B-cell linker##AM180334|BLNK|29760|B-cell linker##AM180335|BLNK|29760|B-cell linker##AM180336|BLNK|29760|B-cell linker##AM180337|BLNK|29760|B-cell linker##AM180338|BLNK|29760|B-cell linker##AM180339|BLNK|29760|B-cell linker##AM180340|BLNK|29760|B-cell linker##AM180341|BLNK|29760|B-cell linker##AM180342|BLNK|29760|B-cell linker##AM180343|BLNK|29760|B-cell linker##AM180344|BLNK|29760|B-cell linker##AM180345|BLNK|29760|B-cell linker##AM180346|BLNK|29760|B-cell linker##BC018906|BLNK|29760|B-cell linker##BC110298|BLNK|29760|B-cell linker##AK027779|BLNK|29760|B-cell linker##AF068180|BLNK|29760|B-cell linker##AF068181|BLNK|29760|B-cell linker##AK225546|BLNK|29760|B-cell linker##NM_001114094|BLNK|29760|B-cell linker##NM_013314|BLNK|29760|B-cell linker##BC109045|ZNF518A|9849|zinc finger protein 518A##BC109046|ZNF518A|9849|zinc finger protein 518A##BC030967|ZNF518A|9849|zinc finger protein 518A##CR627437|ZNF518A|9849|zinc finger protein 518A##NM_014803|ZNF518A|9849|zinc finger protein 518A##NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal##NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal##AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal##AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal##M26144|DNTT|1791|deoxynucleotidyltransferase, terminal##BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal##AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal##AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##BC113577|TLL2|7093|tolloid-like 2##BC112341|TLL2|7093|tolloid-like 2##BC112366|TLL2|7093|tolloid-like 2##AB023149|TLL2|7093|tolloid-like 2##BC013871|TLL2|7093|tolloid-like 2##BC030548|TLL2|7093|tolloid-like 2##AK026106|TLL2|7093|tolloid-like 2##NM_012465|TLL2|7093|tolloid-like 2	0.0	
chr1	110159005	110159145	reg1033366.p2	4.351	+	BC000233 NM_005272	-3387	-	TSC_hg19_v1_chr1_+_110091256 J03238 AK311691 AK312252 J03198 M27543 AB463705 DQ892862 DQ896111 CU692958 AF493907 BT019973 BT019974 J03005	-67780	+	TSC_hg19_v1_chr1_+_110091227 BC025285	-67850	+	TSC_hg19_v1_chr1_+_110162458 AK025706 NM_139156	3367	+	TSC_hg19_v1_chr1_+_110162467 BC007711 BC075844 AK314494 U16267	3466	+	NM_004037 U16268	4200	+	BC000233|GNAT2|2780|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2##NM_005272|GNAT2|2780|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2##J03238|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##AK311691|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##AK312252|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##J03198|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##M27543|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##DQ892862|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##DQ896111|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##AF493907|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##BT019973|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##BT019974|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##J03005|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##BC025285|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##AK025706|AMPD2|271|adenosine monophosphate deaminase 2##NM_139156|AMPD2|271|adenosine monophosphate deaminase 2##BC007711|AMPD2|271|adenosine monophosphate deaminase 2##BC075844|AMPD2|271|adenosine monophosphate deaminase 2##AK314494|AMPD2|271|adenosine monophosphate deaminase 2##U16267|AMPD2|271|adenosine monophosphate deaminase 2##NM_004037|AMPD2|271|adenosine monophosphate deaminase 2##U16268|AMPD2|271|adenosine monophosphate deaminase 2	0.0	
chr12	45609611	45609783	reg1028053.p2	4.351	+	AK131230 NM_001004329 TSC_hg19_v1_chr12_-_45444883	-164815	-	AK295125 NM_001145110	-301987	-	AK299733 NM_001145107	-339065	-	TSC_hg19_v1_chr12_+_45609769 AK126409 NM_001025356 NM_001142679 NM_001204803 AK310641	87	+	TSC_hg19_v1_chr12_+_45609845 AK303996	152	+	TSC_hg19_v1_chr12_+_45609867 AK302819 NM_001142680	174	+	AK131230|DBX2|440097|developing brain homeobox 2##NM_001004329|DBX2|440097|developing brain homeobox 2##AK295125|NELL2|4753|NEL-like 2 (chicken)##NM_001145110|NELL2|4753|NEL-like 2 (chicken)##AK299733|NELL2|4753|NEL-like 2 (chicken)##NM_001145107|NELL2|4753|NEL-like 2 (chicken)##AK126409|ANO6|196527|anoctamin 6##NM_001025356|ANO6|196527|anoctamin 6##NM_001142679|ANO6|196527|anoctamin 6##NM_001204803|ANO6|196527|anoctamin 6##AK310641|ANO6|196527|anoctamin 6##AK303996|ANO6|196527|anoctamin 6##AK302819|ANO6|196527|anoctamin 6##NM_001142680|ANO6|196527|anoctamin 6	0.0	
chr2	74812749	74812882	reg1034105.p1	4.351	+	AK222883 TSC_hg19_v1_chr2_+_74781875 BC111055 U70987 BC114440 AK127127 AK127656 AK314678 BC114497 AK296154 AB587402 AF180527 AK300097	-30952	+	NM_001381	-31304	+	AF311313 NM_032603 AF284815 AF282619 AK309474	-31741	-	BC025997 NM_138804	62348	-	TSC_hg19_v1_chr2_+_74881437 AK095587 AK312728 AL136552 NM_004263 AK075384 AK304358 AK291023 BC018361 BC038411 AK308166 AB021292 AB022317 AB463247 AM393735 CU676238 CU691566 DQ895677	68613	+	AF086198 NM_000189	246966	+	AK222883|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC111055|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##U70987|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC114440|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK127127|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK127656|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK314678|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC114497|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK296154|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF180527|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK300097|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##NM_001381|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF311313|LOXL3|84695|lysyl oxidase-like 3##NM_032603|LOXL3|84695|lysyl oxidase-like 3##AF284815|LOXL3|84695|lysyl oxidase-like 3##AF282619|LOXL3|84695|lysyl oxidase-like 3##AK309474|LOXL3|84695|lysyl oxidase-like 3##BC025997|C2orf65|130951|chromosome 2 open reading frame 65##NM_138804|C2orf65|130951|chromosome 2 open reading frame 65##AK312728|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AL136552|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##NM_004263|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK075384|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK304358|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK291023|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC018361|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC038411|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK308166|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AB021292|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AB022317|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AM393735|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##DQ895677|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AF086198|HK2|3099|hexokinase 2##NM_000189|HK2|3099|hexokinase 2	0.126006	
chr3	57632560	57632703	reg1030801.p1	4.351	+	TSC_hg19_v1_chr3_-_57583171 NM_001660	-49441	-	BC022866 TSC_hg19_v1_chr3_-_57583106 BC016325	-49512	-	TSC_hg19_v1_chr3_-_57583086 BC008753	-49548	-	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	46108	-	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	110571	+	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	361516	+	NM_001660|ARF4|378|ADP-ribosylation factor 4##BC022866|ARF4|378|ADP-ribosylation factor 4##BC016325|ARF4|378|ADP-ribosylation factor 4##BC008753|ARF4|378|ADP-ribosylation factor 4##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta	0.0	
chr4	47512712	47512834	reg1031014.p2	4.351	+	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	-25443	+	TSC_hg19_v1_chr4_-_47465720 BC008371	-47045	-	TSC_hg19_v1_chr4_-_47465683 AY542163 BC015145 NM_017845 AK000509 BC019826 AF182421	-47094	-	TSC_hg19_v1_chr4_+_47708352 D28417	195581	+	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	327317	-	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	403822	-	BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D##BC008371|COMMD8|54951|COMM domain containing 8##AY542163|COMMD8|54951|COMM domain containing 8##BC015145|COMMD8|54951|COMM domain containing 8##NM_017845|COMMD8|54951|COMM domain containing 8##AK000509|COMMD8|54951|COMM domain containing 8##BC019826|COMMD8|54951|COMM domain containing 8##AF182421|COMMD8|54951|COMM domain containing 8##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1	0.027163	
chr5	124040553	124040622	reg1032623.p1	4.351	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1192705	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1281443	-	NM_001136239 AK297992 AF272898 AF272899	-1615743	+	BC131507 AB033107 BC151226 NM_020747	40201	-	NM_001146319 AK316288 AK300154	1655227	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1718256	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.0	
chr6	55158068	55158186	reg1030644.p2	4.351	+	NM_001526 AK314279	-119033	+	AK055204 NM_001010872 BC101628 BC112275	-446539	+	BC070278 NM_014464 AK312918 BC056235 AB022277 AF195116 AF195117 CU687080 CU691132 EU832329 EU832414	-984852	+	AY358198 NM_207410	34139	+	CU692876 AL137605 AK293856 BC024194 AK055075 AK297191 AK294210 AK127587 NM_001042406 NM_019036	285805	-	TSC_hg19_v1_chr6_-_55740358 M60314 BC027958 NM_021073	582239	-	NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2##AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2##AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B##BC070278|TINAG|27283|tubulointerstitial nephritis antigen##NM_014464|TINAG|27283|tubulointerstitial nephritis antigen##AK312918|TINAG|27283|tubulointerstitial nephritis antigen##BC056235|TINAG|27283|tubulointerstitial nephritis antigen##AB022277|TINAG|27283|tubulointerstitial nephritis antigen##AF195116|TINAG|27283|tubulointerstitial nephritis antigen##AF195117|TINAG|27283|tubulointerstitial nephritis antigen##EU832329|TINAG|27283|tubulointerstitial nephritis antigen##EU832414|TINAG|27283|tubulointerstitial nephritis antigen##AY358198|GFRAL|389400|GDNF family receptor alpha like##NM_207410|GFRAL|389400|GDNF family receptor alpha like##AL137605|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK293856|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##BC024194|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK055075|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK297191|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK294210|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##AK127587|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_001042406|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##NM_019036|HMGCLL1|54511|3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1##M60314|BMP5|653|bone morphogenetic protein 5##BC027958|BMP5|653|bone morphogenetic protein 5##NM_021073|BMP5|653|bone morphogenetic protein 5	0.992674	CTCF.p2:-20:0.993
chr7	48376757	48376847	reg1034482.p1	4.351	+	AK126220 AY204751 BX647273 NM_152701	-165747	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-247847	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	-248002	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	1436468	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	1756022	-	NM_001161834	1758879	+	AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72	0.469969	CTCF.p2:12:0.470
chr17	75316955	75317079	reg1030638.p1	4.350	+	BC021192 TSC_hg19_v1_chr17_+_75316374 BT007215 CU676864 DQ890623 DQ893792	-627	+	TSC_hg19_v1_chr17_+_75316065 AF142408	-914	+	TSC_hg19_v1_chr17_+_75315642 AF123052	-1368	+	TSC_hg19_v1_chr17_+_75369236 AJ312319 NM_001113493	52236	+	TSC_hg19_v1_chr17_+_75369418 AK304143	52408	+	AB023208 NM_001113494 AJ312322	55152	+	BC021192|SEPT9|10801|septin 9##BT007215|SEPT9|10801|septin 9##DQ890623|SEPT9|10801|septin 9##DQ893792|SEPT9|10801|septin 9##AF142408|SEPT9|10801|septin 9##AF123052|SEPT9|10801|septin 9##AJ312319|SEPT9|10801|septin 9##NM_001113493|SEPT9|10801|septin 9##AK304143|SEPT9|10801|septin 9##AB023208|SEPT9|10801|septin 9##NM_001113494|SEPT9|10801|septin 9##AJ312322|SEPT9|10801|septin 9	0.0	
chr19	43139227	43139338	reg1034294.p1	4.350	+	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	-40252	-	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	-106690	-	X16356 TSC_hg19_v1_chr19_-_43031473	-107873	-	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	105319	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	130542	-	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	244543	-	DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1	0.996671	CTCF.p2:-16:0.997
chr20	18487934	18488054	reg1033654.p1	4.350	+	AB464147 EU446767 AL832411 AF237576 BC020627 BC015938 NM_006606	-10146	-	TSC_hg19_v1_chr20_+_18448037 BC012588 BC016761 NM_006466 AK314838 AK096684 AK223298 AK290892 U93869 AB464048 DQ892695 DQ896169	-39905	+	TSC_hg19_v1_chr20_-_18447678 CR749327 BC036231 BC130341 BC144153 AK295073 AK055544 AK299746 NM_001099407	-40269	-	TSC_hg19_v1_chr20_+_18488207 NM_006363 NM_032985 NM_032986 NM_001172746	227	+	X97065 AK296270 BC095404 TSC_hg19_v1_chr20_+_18488541 BC005032 BC001151	541	+	TSC_hg19_v1_chr20_+_18488583 AK299171 BC001575 AK299513 NM_001172745 BC005404	632	+	EU446767|RBBP9|10741|retinoblastoma binding protein 9##AL832411|RBBP9|10741|retinoblastoma binding protein 9##AF237576|RBBP9|10741|retinoblastoma binding protein 9##BC020627|RBBP9|10741|retinoblastoma binding protein 9##BC015938|RBBP9|10741|retinoblastoma binding protein 9##NM_006606|RBBP9|10741|retinoblastoma binding protein 9##BC012588|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##BC016761|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##NM_006466|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK314838|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK096684|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK223298|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK290892|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##U93869|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##DQ892695|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##DQ896169|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##CR749327|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC036231|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC130341|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC144153|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK295073|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK055544|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK299746|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##NM_001099407|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##NM_006363|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_032985|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_032986|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_001172746|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##X97065|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AK296270|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC095404|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC005032|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC001151|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AK299171|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC001575|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AK299513|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_001172745|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC005404|SEC23B|10483|Sec23 homolog B (S. cerevisiae)	0.0	
chr20	45328497	45328641	reg1032713.p1	4.350	+	TSC_hg19_v1_chr20_-_45318164 BC009727 AB017505 AB065434 NM_033550	-10348	-	TSC_hg19_v1_chr20_-_45318084 BC010637 BC035461 AB587589 AK096502 BC066309 BC019621 AK315182	-10602	-	TSC_hg19_v1_chr20_-_45313125 AK096658 NM_001011554 NM_001193340	-15445	-	AF248053 TSC_hg19_v1_chr20_+_45338287 AK055548 NM_030777 BC101657 BC113423 AK290961 AK315269 AF321240	9668	+	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	194713	+	TSC_hg19_v1_chr20_+_45523505 BC008803	194939	+	BC009727|TP53RK|112858|TP53 regulating kinase##AB017505|TP53RK|112858|TP53 regulating kinase##AB065434|TP53RK|112858|TP53 regulating kinase##NM_033550|TP53RK|112858|TP53 regulating kinase##BC010637|TP53RK|112858|TP53 regulating kinase##BC035461|TP53RK|112858|TP53 regulating kinase##AK096502|TP53RK|112858|TP53 regulating kinase##BC066309|TP53RK|112858|TP53 regulating kinase##BC019621|TP53RK|112858|TP53 regulating kinase##AK315182|TP53RK|112858|TP53 regulating kinase##AK096658|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001011554|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193340|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AF248053|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK055548|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##NM_030777|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC101657|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC113423|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK290961|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AK315269|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##AF321240|SLC2A10|81031|solute carrier family 2 (facilitated glucose transporter), member 10##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)	0.786245	CTCF.p2:26:0.786
chr20	58094628	58094717	reg1034135.p2	4.350	+	TSC_hg19_v1_chr20_+_57875665 J05081 X52001 AB590897 CU679163 BT007085 DQ096281	-218915	+	BC008876 TSC_hg19_v1_chr20_+_57875490 BC053866 NM_000114 NM_207032 NM_207033 NM_207034	-219183	+	NM_178457	-328598	+	AK098788 NM_001199505	57891	+	BC108303 AJ311122 NM_080672 TSC_hg19_v1_chr20_+_58179660 BC117362 BC117364	84982	+	AJ617581 NM_001199506 AK316047	157044	+	J05081|EDN3|1908|endothelin 3##X52001|EDN3|1908|endothelin 3##BT007085|EDN3|1908|endothelin 3##DQ096281|EDN3|1908|endothelin 3##BC008876|EDN3|1908|endothelin 3##BC053866|EDN3|1908|endothelin 3##NM_000114|EDN3|1908|endothelin 3##NM_207032|EDN3|1908|endothelin 3##NM_207033|EDN3|1908|endothelin 3##NM_207034|EDN3|1908|endothelin 3##NM_178457|ZNF831|128611|zinc finger protein 831##AK098788|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199505|PHACTR3|116154|phosphatase and actin regulator 3##BC108303|PHACTR3|116154|phosphatase and actin regulator 3##AJ311122|PHACTR3|116154|phosphatase and actin regulator 3##NM_080672|PHACTR3|116154|phosphatase and actin regulator 3##BC117362|PHACTR3|116154|phosphatase and actin regulator 3##BC117364|PHACTR3|116154|phosphatase and actin regulator 3##AJ617581|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199506|PHACTR3|116154|phosphatase and actin regulator 3##AK316047|PHACTR3|116154|phosphatase and actin regulator 3	0.044586	
chr3	123371200	123371337	reg1003186.p1	4.350	+	TSC_hg19_v1_chr3_-_123339426 NM_053031 NM_053032	-31792	-	BC113458 BC113456 BC100761 BC100762 BC100763 AF096773 AF096774 AF096775 AK314412 TSC_hg19_v1_chr3_-_123339352 BC017811 BC107783 Y09530 BC064420 AK314443	-31984	-	TSC_hg19_v1_chr3_-_123303927 CU687458 AK289983 NM_198402 AK125375 BC060839 AY191814 BC049369	-67335	-	TSC_hg19_v1_chr3_-_123411207 AK300610	39949	-	TSC_hg19_v1_chr3_-_123603158 BC064695 NM_053025 NM_053026 NM_053027 NM_053028	231903	-	TSC_hg19_v1_chr3_-_123680077 AK123060 AK307847 AK294979 BC040285	308818	-	NM_053031|MYLK|4638|myosin light chain kinase##NM_053032|MYLK|4638|myosin light chain kinase##BC113458|MYLK|4638|myosin light chain kinase##BC113456|MYLK|4638|myosin light chain kinase##BC100761|MYLK|4638|myosin light chain kinase##BC100762|MYLK|4638|myosin light chain kinase##BC100763|MYLK|4638|myosin light chain kinase##AF096773|MYLK|4638|myosin light chain kinase##AF096774|MYLK|4638|myosin light chain kinase##AF096775|MYLK|4638|myosin light chain kinase##AK314412|MYLK|4638|myosin light chain kinase##BC017811|MYLK|4638|myosin light chain kinase##BC107783|MYLK|4638|myosin light chain kinase##Y09530|MYLK|4638|myosin light chain kinase##BC064420|MYLK|4638|myosin light chain kinase##AK314443|MYLK|4638|myosin light chain kinase##AK289983|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##NM_198402|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC060839|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AY191814|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC049369|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AK300610|MYLK|4638|myosin light chain kinase##BC064695|MYLK|4638|myosin light chain kinase##NM_053025|MYLK|4638|myosin light chain kinase##NM_053026|MYLK|4638|myosin light chain kinase##NM_053027|MYLK|4638|myosin light chain kinase##NM_053028|MYLK|4638|myosin light chain kinase##AK123060|CCDC14|64770|coiled-coil domain containing 14##AK307847|CCDC14|64770|coiled-coil domain containing 14##AK294979|CCDC14|64770|coiled-coil domain containing 14##BC040285|CCDC14|64770|coiled-coil domain containing 14	0.0	
chr7	128554935	128555101	reg1028707.p2	4.350	+	TSC_hg19_v1_chr7_-_128550763 AK122706 NM_001135914 NM_199349	-4252	-	TSC_hg19_v1_chr7_-_128543406 AK095464	-11617	-	NM_001195150	-48555	+	AK293654 AY693665 AY693668 NM_001098629 NM_001098630 NM_001242452 DQ995492 U51127 AK297083 AY504947 AY693666 AY693667 EU258896	23018	+	DQ995493 AY693669 BC004139 BC004201 DQ277633 NM_032643	23240	+	EU258898 NM_001098627 DQ995494 AY504946 DQ277634	25790	+	AK122706|KCP|375616|kielin/chordin-like protein##NM_001135914|KCP|375616|kielin/chordin-like protein##NM_199349|KCP|375616|kielin/chordin-like protein##AK095464|KCP|375616|kielin/chordin-like protein##NM_001195150|LOC100130705|100130705|uncharacterized LOC100130705##AK293654|IRF5|3663|interferon regulatory factor 5##AY693665|IRF5|3663|interferon regulatory factor 5##AY693668|IRF5|3663|interferon regulatory factor 5##NM_001098629|IRF5|3663|interferon regulatory factor 5##NM_001098630|IRF5|3663|interferon regulatory factor 5##NM_001242452|IRF5|3663|interferon regulatory factor 5##DQ995492|IRF5|3663|interferon regulatory factor 5##U51127|IRF5|3663|interferon regulatory factor 5##AK297083|IRF5|3663|interferon regulatory factor 5##AY504947|IRF5|3663|interferon regulatory factor 5##AY693666|IRF5|3663|interferon regulatory factor 5##AY693667|IRF5|3663|interferon regulatory factor 5##EU258896|IRF5|3663|interferon regulatory factor 5##AY693669|IRF5|3663|interferon regulatory factor 5##BC004139|IRF5|3663|interferon regulatory factor 5##BC004201|IRF5|3663|interferon regulatory factor 5##DQ277633|IRF5|3663|interferon regulatory factor 5##NM_032643|IRF5|3663|interferon regulatory factor 5##EU258898|IRF5|3663|interferon regulatory factor 5##NM_001098627|IRF5|3663|interferon regulatory factor 5##DQ995494|IRF5|3663|interferon regulatory factor 5##AY504946|IRF5|3663|interferon regulatory factor 5##DQ277634|IRF5|3663|interferon regulatory factor 5	0.0	
chr7	47847521	47847631	reg1031293.p2	4.350	+	AK024728 NM_025031 BC113679 BC113681 AK092057 AX747337	-12638	+	AK126096 NM_001123065	-152735	+	TSC_hg19_v1_chr7_-_47622186 AB208995	-225390	-	AB061683 NM_138295	140477	-	BT019481 BT019482 CR536552 Y16893 AB463759 BC007013 TSC_hg19_v1_chr7_-_48019149 AK294117 AK290459 AF076844 AF110393	171576	-	TSC_hg19_v1_chr7_-_48019247 NM_004507	171653	-	AK024728|C7orf69|80099|chromosome 7 open reading frame 69##NM_025031|C7orf69|80099|chromosome 7 open reading frame 69##BC113679|C7orf69|80099|chromosome 7 open reading frame 69##BC113681|C7orf69|80099|chromosome 7 open reading frame 69##AK092057|PKD1L1|168507|polycystic kidney disease 1 like 1##AK126096|C7orf65|401335|chromosome 7 open reading frame 65##NM_001123065|C7orf65|401335|chromosome 7 open reading frame 65##AB208995|TNS3|64759|tensin 3##AB061683|PKD1L1|168507|polycystic kidney disease 1 like 1##NM_138295|PKD1L1|168507|polycystic kidney disease 1 like 1##BT019481|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BT019482|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##CR536552|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##Y16893|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BC007013|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK294117|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK290459|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF076844|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF110393|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##NM_004507|HUS1|3364|HUS1 checkpoint homolog (S. pombe)	0.434186	CTCF.p2:13:0.434
chr7	72300628	72300787	reg1032386.p2	4.350	+	TSC_hg19_v1_chr7_+_72300065 BC010183	-608	+	AK303225 AK309556 AK301471 BC068520 AK310913 NM_001145440 NM_001145441	-1925	-	NM_031468	-423348	-	TSC_hg19_v1_chr7_+_72349925 AB014518 NM_172020	49228	+	TSC_hg19_v1_chr7_+_72395623 AK123814 AB289621	94918	+	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	96167	+	BC010183|SBDSP1|155370|Shwachman-Bodian-Diamond syndrome pseudogene 1##AK303225|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK309556|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK301471|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##BC068520|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##AK310913|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145440|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_001145441|TYW1B|441250|tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)##NM_031468|CALN1|83698|calneuron 1##AB014518|POM121|9883|POM121 membrane glycoprotein##NM_172020|POM121|9883|POM121 membrane glycoprotein##AK123814|POM121|9883|POM121 membrane glycoprotein##AB289621|POM121|9883|POM121 membrane glycoprotein##AK292548|POM121|9883|POM121 membrane glycoprotein	0.184967	
chr7	73809037	73809155	reg1031210.p1	4.350	+	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	-105309	+	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	-140360	-	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	-140385	-	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	59068	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	59212	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	59339	+	AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1	0.656663	CTCF.p2:4:0.657
chr1	25279130	25279254	reg1025964.p2	4.349	+	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-22406	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-22453	-	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	-22767	-	BC013362 AK310945 NM_001031680 AF022726	12350	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	279795	-	BC065040 TSC_hg19_v1_chr1_-_25573922	294731	-	AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63	0.531131	CTCF.p2:27:0.491
chr17	39643157	39643272	reg1030653.p2	4.349	+	AB463814 NM_002280 X90763	-5843	-	X81419 AB528846 NM_002278	-19658	-	BC131715 NM_006771	-45691	-	NM_003771	2901	-	AB528326 DQ890652 DQ893832 HQ258420 BC126184 BC136494 BC077718 X14640 BC002661 X52426 AK223051 AK223077 AK290244 AK296806 AK092276 AK309752 AX747448 NM_002274 NM_153490 TSC_hg19_v1_chr17_-_39661865	18620	-	BT007261 CU678086 DQ892990 DQ896238 AB527603 BC110649 BC002641 X07696 TSC_hg19_v1_chr17_-_39675141 AK304059 NM_002275	31959	-	NM_002280|KRT35|3886|keratin 35##X90763|KRT35|3886|keratin 35##X81419|KRT32|3882|keratin 32##NM_002278|KRT32|3882|keratin 32##BC131715|KRT38|8687|keratin 38##NM_006771|KRT38|8687|keratin 38##NM_003771|KRT36|8689|keratin 36##DQ890652|KRT13|3860|keratin 13##DQ893832|KRT13|3860|keratin 13##HQ258420|KRT13|3860|keratin 13##BC126184|KRT13|3860|keratin 13##BC136494|KRT13|3860|keratin 13##BC077718|KRT13|3860|keratin 13##X14640|KRT13|3860|keratin 13##BC002661|KRT13|3860|keratin 13##X52426|KRT13|3860|keratin 13##AK223051|KRT13|3860|keratin 13##AK223077|KRT13|3860|keratin 13##AK290244|KRT13|3860|keratin 13##AK296806|KRT13|3860|keratin 13##AK092276|KRT13|3860|keratin 13##AK309752|KRT13|3860|keratin 13##NM_002274|KRT13|3860|keratin 13##NM_153490|KRT13|3860|keratin 13##BT007261|KRT15|3866|keratin 15##DQ892990|KRT15|3866|keratin 15##DQ896238|KRT15|3866|keratin 15##BC110649|KRT15|3866|keratin 15##BC002641|KRT15|3866|keratin 15##X07696|KRT15|3866|keratin 15##AK304059|KRT15|3866|keratin 15##NM_002275|KRT15|3866|keratin 15	1.111051	CTCF.p2:9:0.999
chr19	39881419	39881599	reg1030865.p2	4.349	+	TSC_hg19_v1_chr19_+_39833151 BC080641	-48351	+	TSC_hg19_v1_chr19_+_39833101 BC054518 NM_018028 EF601121	-48394	+	TSC_hg19_v1_chr19_+_39833098 AK001073	-48412	+	CU673992 DQ891839 DQ895026 TSC_hg19_v1_chr19_-_39881519	18	-	AK098423 AJ401156 BC000017 NM_019088 TSC_hg19_v1_chr19_-_39881747 AK001985 BC013402 AK294625	185	-	AK300563 TSC_hg19_v1_chr19_+_39882017 AY729650 NM_017592 AB528726	474	+	BC080641|SAMD4B|55095|sterile alpha motif domain containing 4B##BC054518|SAMD4B|55095|sterile alpha motif domain containing 4B##NM_018028|SAMD4B|55095|sterile alpha motif domain containing 4B##EF601121|SAMD4B|55095|sterile alpha motif domain containing 4B##AK001073|SAMD4B|55095|sterile alpha motif domain containing 4B##DQ891839|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##DQ895026|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK098423|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AJ401156|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##BC000017|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##NM_019088|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK001985|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##BC013402|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK294625|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK300563|MED29|55588|mediator complex subunit 29##AY729650|MED29|55588|mediator complex subunit 29##NM_017592|MED29|55588|mediator complex subunit 29	0.0	
chr19	4108912	4109089	reg1029050.p1	4.349	+	TSC_hg19_v1_chr19_-_4103205 AK093125	-5788	-	BC113511 TSC_hg19_v1_chr19_-_4066828 AF000561 NM_015898 BC064505	-42183	-	TSC_hg19_v1_chr19_-_4065504 BC084568	-43504	-	AB463893 DQ893601 DQ895060 L11285 BC018645 TSC_hg19_v1_chr19_-_4124114 BX538081	14992	-	TSC_hg19_v1_chr19_-_4124145 BC000471 NM_030662	15133	-	TSC_hg19_v1_chr19_+_4153636 AK313099 AB050902 AK172839 NM_032607 AB073612 BC101504 BC143609 BC143610 BC101508 EU446882	44667	+	AK093125|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BC113511|ZBTB7A|51341|zinc finger and BTB domain containing 7A##AF000561|ZBTB7A|51341|zinc finger and BTB domain containing 7A##NM_015898|ZBTB7A|51341|zinc finger and BTB domain containing 7A##BC084568|ZBTB7A|51341|zinc finger and BTB domain containing 7A##DQ893601|MAP2K2|5605|mitogen-activated protein kinase kinase 2##DQ895060|MAP2K2|5605|mitogen-activated protein kinase kinase 2##L11285|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BC018645|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BX538081|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BC000471|MAP2K2|5605|mitogen-activated protein kinase kinase 2##NM_030662|MAP2K2|5605|mitogen-activated protein kinase kinase 2##AK313099|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB050902|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AK172839|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##NM_032607|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB073612|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101504|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143609|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143610|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101508|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##EU446882|CREB3L3|84699|cAMP responsive element binding protein 3-like 3	0.0	
chr2	241976420	241976600	reg1028773.p1	4.349	+	NM_001080437	-38256	+	AK056601 NM_001085437	-140938	-	BC125154 BC125155 AK026324 NM_024861 AK096434	-145091	-	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	65216	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	112361	-	AK308015 BC051689 TSC_hg19_v1_chr2_+_242089094	112548	+	NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54##BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase##AK308015|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC051689|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7	0.0	
chr6	21332430	21332557	reg1031753.p1	4.349	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-797770	+	CR749285 NM_001243076	-928460	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-930390	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	261879	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	334166	+	BC015850 NM_000948	965236	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.16327	
chr7	24797297	24797453	reg1034883.p1	4.349	+	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-36	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	-308	-	TSC_hg19_v1_chr7_-_24797042 BC099911	-338	-	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	222	-	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	222369	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	367502	-	BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##BC099911|DFNA5|1687|deafness, autosomal dominant 5##NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic	0.0	
chr9	316672	316791	reg1034742.p1	4.349	+	TSC_hg19_v1_chr9_+_273045 HM991479 NM_001190458 NM_001193536 AK093572 AX748209 HM991480 BC045629 AK310555 BC130518 BC143929	-43678	+	NM_152569	-100839	-	AK293353 TSC_hg19_v1_chr9_+_214867	-101852	+	TSC_hg19_v1_chr9_+_504732 BX648931 AL832454 NM_015158 AK292989 AL833161 AK290028 AB205106	188017	+	AK311119 AB205111 TSC_hg19_v1_chr9_+_684289	367513	+	AB205112 TSC_hg19_v1_chr9_+_686677	369935	+	HM991479|DOCK8|81704|dedicator of cytokinesis 8##NM_001190458|DOCK8|81704|dedicator of cytokinesis 8##NM_001193536|DOCK8|81704|dedicator of cytokinesis 8##AK093572|DOCK8|81704|dedicator of cytokinesis 8##HM991480|DOCK8|81704|dedicator of cytokinesis 8##BC045629|DOCK8|81704|dedicator of cytokinesis 8##AK310555|DOCK8|81704|dedicator of cytokinesis 8##BC130518|DOCK8|81704|dedicator of cytokinesis 8##BC143929|DOCK8|81704|dedicator of cytokinesis 8##NM_152569|C9orf66|157983|chromosome 9 open reading frame 66##AK293353|DOCK8|81704|dedicator of cytokinesis 8##BX648931|KANK1|23189|KN motif and ankyrin repeat domains 1##AL832454|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_015158|KANK1|23189|KN motif and ankyrin repeat domains 1##AK292989|KANK1|23189|KN motif and ankyrin repeat domains 1##AL833161|KANK1|23189|KN motif and ankyrin repeat domains 1##AK290028|KANK1|23189|KN motif and ankyrin repeat domains 1##AB205106|KANK1|23189|KN motif and ankyrin repeat domains 1	0.980552	CTCF.p2:21:0.981
chrX	109651316	109651497	reg1006808.p1	4.349	+	TSC_hg19_v1_chrX_-_109561428 AJ007014	-89960	-	TSC_hg19_v1_chrX_-_109561314 BX648797 NM_001025580 NM_015365	-90060	-	CU687440 TSC_hg19_v1_chrX_-_109561311 AK314596 BC060813	-90101	-	AB037739 AY121804 NM_020769	10878	+	AK091430 NM_001171689	32052	-	BC002909 AK293106 AK297563 AK312270 NM_145234	387627	-	AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BX648797|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001025580|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_015365|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AK314596|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC060813|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AB037739|RGAG1|57529|retrotransposon gag domain containing 1##AY121804|RGAG1|57529|retrotransposon gag domain containing 1##NM_020769|RGAG1|57529|retrotransposon gag domain containing 1##AK091430|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001171689|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC002909|CHRDL1|91851|chordin-like 1##AK293106|CHRDL1|91851|chordin-like 1##AK297563|CHRDL1|91851|chordin-like 1##AK312270|CHRDL1|91851|chordin-like 1##NM_145234|CHRDL1|91851|chordin-like 1	0.0	
chr10	63759891	63760071	reg1025255.p1	4.348	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-98550	+	NM_032199	-98969	+	BC041932 NM_173554	-337263	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	49115	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	268558	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	374062	+	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365	0.0	
chr11	35294199	35294339	reg1022028.p2	4.348	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	-15444	-	TSC_hg19_v1_chr11_+_35198199 AK129808	-96057	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-133409	+	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	146442	-	TSC_hg19_v1_chr11_-_35441106 NM_004171	146834	-	S83375 U01824 TSC_hg19_v1_chr11_-_35441572 AK122843 NM_001195728 NM_001252652	147286	-	CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK129808|CD44|960|CD44 molecule (Indian blood group)##AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.0	
chr16	71513393	71513535	reg1029823.p1	4.348	+	AK123826 TSC_hg19_v1_chr16_+_71496196	-17276	+	TSC_hg19_v1_chr16_-_71496127 AF507946 BC007256 NM_145911 BC048974 AK091039 AX746746 AK297130	-17343	-	TSC_hg19_v1_chr16_+_71392648 BC015484 X56667	-120820	+	AK292260 BC030658 AK057330 BC047091 NM_006961	9751	-	NM_005769 AF131235 NM_001166395 AK026635 AK074746	46629	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	97508	-	AF507946|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC007256|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_145911|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC048974|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK091039|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK297130|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC015484|CALB2|794|calbindin 2##X56667|CALB2|794|calbindin 2##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19##NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase	0.570195	CTCF.p2:22:0.570
chr17	76130175	76130355	reg1007184.p1	4.348	+	BC023597 NM_007267 TSC_hg19_v1_chr17_-_76128499	-1765	-	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	-3399	+	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	-5427	-	AY358510 NM_001163075	12168	+	TSC_hg19_v1_chr17_+_76164661 AJ002308 AY358916 NM_004710 BC000407 BC105992 BC029755 DQ891832 DQ895019	34395	+	AB451268 AB451395 BT006941 AB591021 BC007872 BC007986 BC006484 AK314950 K02581 TSC_hg19_v1_chr17_-_76183133 NM_003258	52914	-	BC023597|TMC6|11322|transmembrane channel-like 6##NM_007267|TMC6|11322|transmembrane channel-like 6##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6##AY358510|C17orf99|100141515|chromosome 17 open reading frame 99##NM_001163075|C17orf99|100141515|chromosome 17 open reading frame 99##AJ002308|SYNGR2|9144|synaptogyrin 2##AY358916|SYNGR2|9144|synaptogyrin 2##NM_004710|SYNGR2|9144|synaptogyrin 2##BC000407|SYNGR2|9144|synaptogyrin 2##BC105992|SYNGR2|9144|synaptogyrin 2##BC029755|SYNGR2|9144|synaptogyrin 2##DQ891832|SYNGR2|9144|synaptogyrin 2##DQ895019|SYNGR2|9144|synaptogyrin 2##AB451268|TK1|7083|thymidine kinase 1, soluble##AB451395|TK1|7083|thymidine kinase 1, soluble##BT006941|TK1|7083|thymidine kinase 1, soluble##BC007872|TK1|7083|thymidine kinase 1, soluble##BC007986|TK1|7083|thymidine kinase 1, soluble##BC006484|TK1|7083|thymidine kinase 1, soluble##AK314950|TK1|7083|thymidine kinase 1, soluble##K02581|TK1|7083|thymidine kinase 1, soluble##NM_003258|TK1|7083|thymidine kinase 1, soluble	0.0	
chr20	7142486	7142584	reg1030238.p1	4.348	+	BC069214 NM_001200	-393791	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-1038372	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-1038658	-	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	778567	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	857765	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	857872	-	BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4	0.956413	CTCF.p2:-3:0.956
chr2	79268205	79268321	reg1036628.p1	4.348	+	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	-15425	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	-1518845	-	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-3330212	-	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	46870	-	AK307292 NM_002909 TSC_hg19_v1_chr2_+_79347583	79273	+	TSC_hg19_v1_chr2_+_79347612 AK291981 AK311087 M18963	79357	+	AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta##AK307292|REG1A|5967|regenerating islet-derived 1 alpha##NM_002909|REG1A|5967|regenerating islet-derived 1 alpha##AK291981|REG1A|5967|regenerating islet-derived 1 alpha##M18963|REG1A|5967|regenerating islet-derived 1 alpha	0.194542	
chr4	3436640	3436762	reg1031426.p1	4.348	+	AF030109 NM_198227	-64978	+	TSC_hg19_v1_chr4_+_3318244 BC106944	-118399	+	AF030111 NM_002926 NM_198229	-120828	+	BC112190 BC112192 TSC_hg19_v1_chr4_+_3443674	6966	+	TSC_hg19_v1_chr4_+_3443701 AK314099 D14012 NM_001528	7007	+	NM_001164673 NM_173660 AK091037 AX746744 BC141852 BC131544 AB220918	28366	+	AF030109|RGS12|6002|regulator of G-protein signaling 12##NM_198227|RGS12|6002|regulator of G-protein signaling 12##BC106944|RGS12|6002|regulator of G-protein signaling 12##AF030111|RGS12|6002|regulator of G-protein signaling 12##NM_002926|RGS12|6002|regulator of G-protein signaling 12##NM_198229|RGS12|6002|regulator of G-protein signaling 12##BC112190|HGFAC|3083|HGF activator##BC112192|HGFAC|3083|HGF activator##AK314099|HGFAC|3083|HGF activator##D14012|HGFAC|3083|HGF activator##NM_001528|HGFAC|3083|HGF activator##NM_001164673|DOK7|285489|docking protein 7##NM_173660|DOK7|285489|docking protein 7##AK091037|DOK7|285489|docking protein 7##BC141852|DOK7|285489|docking protein 7##BC131544|DOK7|285489|docking protein 7##AB220918|DOK7|285489|docking protein 7	0.255327	CTCF.p2:12:0.255
chr6	38656311	38656449	reg1031352.p2	4.348	+	NM_001099272 NM_052893	-48457	-	TSC_hg19_v1_chr6_-_38607697 BX537534	-48714	-	AB067467 TSC_hg19_v1_chr6_-_38607611	-48775	-	BT019987 BT019988 CU674854 S83285 TSC_hg19_v1_chr6_-_38670850 AB209801 AK130312	14460	-	TSC_hg19_v1_chr6_-_38670880 BC015934	14495	-	TSC_hg19_v1_chr6_-_38670886 AK129573 L07837 BC001741 AL833442	14512	-	NM_001099272|BTBD9|114781|BTB (POZ) domain containing 9##NM_052893|BTBD9|114781|BTB (POZ) domain containing 9##BX537534|BTBD9|114781|BTB (POZ) domain containing 9##AB067467|BTBD9|114781|BTB (POZ) domain containing 9##BT019987|GLO1|2739|glyoxalase I##BT019988|GLO1|2739|glyoxalase I##S83285|GLO1|2739|glyoxalase I##AB209801|GLO1|2739|glyoxalase I##AK130312|GLO1|2739|glyoxalase I##BC015934|GLO1|2739|glyoxalase I##AK129573|GLO1|2739|glyoxalase I##L07837|GLO1|2739|glyoxalase I##BC001741|GLO1|2739|glyoxalase I##AL833442|GLO1|2739|glyoxalase I	0.164884	
chrX	118861248	118861397	reg1029752.p2	4.348	+	AY034177 AF403058 AF403059 AF403060 AF403061 AF403062 AY679521 NM_015129 NM_145799 NM_145800 NM_145802 TSC_hg19_v1_chrX_-_118827360 AK290977	-33971	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	-34143	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	-34190	-	TSC_hg19_v1_chrX_+_118892553 NM_001105576	31259	+	U57846 AK098280 BC001019 D79205 TSC_hg19_v1_chrX_-_118925592 BC070205 D28397 NM_001000	64262	-	TSC_hg19_v1_chrX_-_118986969 AF318576 AK093728 AX748280 BC121017 BC121018 AY013251 BC008494 NM_023010 NM_080632	125629	-	AY034177|SEPT6|23157|septin 6##AF403058|SEPT6|23157|septin 6##AF403059|SEPT6|23157|septin 6##AF403060|SEPT6|23157|septin 6##AF403061|SEPT6|23157|septin 6##AF403062|SEPT6|23157|septin 6##AY679521|SEPT6|23157|septin 6##NM_015129|SEPT6|23157|septin 6##NM_145799|SEPT6|23157|septin 6##NM_145800|SEPT6|23157|septin 6##NM_145802|SEPT6|23157|septin 6##AK290977|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##NM_001105576|ANKRD58|347454|ankyrin repeat domain 58##U57846|RPL39|6170|ribosomal protein L39##BC001019|RPL39|6170|ribosomal protein L39##D79205|RPL39|6170|ribosomal protein L39##BC070205|RPL39|6170|ribosomal protein L39##D28397|RPL39|6170|ribosomal protein L39##NM_001000|RPL39|6170|ribosomal protein L39##AF318576|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##AK093728|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC121017|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC121018|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##AY013251|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##BC008494|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##NM_023010|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)##NM_080632|UPF3B|65109|UPF3 regulator of nonsense transcripts homolog B (yeast)	0.0	
chr11	2713717	2713835	reg1034512.p1	4.347	+	BC007733 TSC_hg19_v1_chr11_-_2560881	-152929	-	TSC_hg19_v1_chr11_+_2466237 AF000571 NM_000218 EF010934 AB464057 AY114213 U86146	-247527	+	AJ270996 BC093787 BC093789 BC143351 BC143353 AF177473 NM_014555	-269519	-	AK123073 TSC_hg19_v1_chr11_-_2721223	7449	-	U22398 BC039188 NM_000076 NM_001122630 NM_001122631 TSC_hg19_v1_chr11_-_2907004 BC067842	193218	-	TSC_hg19_v1_chr11_+_2920918 BC015571 NM_183233	207169	+	AF000571|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##NM_000218|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##EF010934|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AY114213|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##U86146|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AJ270996|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093787|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093789|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143351|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143353|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF177473|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##NM_014555|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AK123073|KCNQ1OT1|10984|KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)##U22398|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC039188|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_000076|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122630|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122631|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC067842|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC015571|SLC22A18|5002|solute carrier family 22, member 18##NM_183233|SLC22A18|5002|solute carrier family 22, member 18	0.52959	CTCF.p2:-11:0.530
chr12	5620829	5620944	reg1032647.p1	4.347	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	-17548	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	-79610	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	-467767	+	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	433588	-	AJ272204 NM_020373	434511	-	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	612873	-	BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor	0.221552	CTCF.p2:-12:0.222
chr20	4089547	4089727	reg1000786.p2	4.347	+	AL096778 NM_007219 BC039584 TSC_hg19_v1_chr20_-_3996221 BC000213 BC003141 NM_001134337 NM_001134338 BC032738	-93472	-	NM_153640 BC107724 BC065019	-219148	+	TSC_hg19_v1_chr20_+_3870042 AK310190 AK097796 BC142976 BC009421	-219581	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	39798	+	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	39886	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	139953	-	AL096778|RNF24|11237|ring finger protein 24##NM_007219|RNF24|11237|ring finger protein 24##BC039584|RNF24|11237|ring finger protein 24##BC000213|RNF24|11237|ring finger protein 24##NM_001134337|RNF24|11237|ring finger protein 24##NM_001134338|RNF24|11237|ring finger protein 24##NM_153640|PANK2|80025|pantothenate kinase 2##BC107724|PANK2|80025|pantothenate kinase 2##BC065019|PANK2|80025|pantothenate kinase 2##AK310190|PANK2|80025|pantothenate kinase 2##AK097796|PANK2|80025|pantothenate kinase 2##BC142976|PANK2|80025|pantothenate kinase 2##BC009421|PANK2|80025|pantothenate kinase 2##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor	0.0	
chr4	176430618	176430744	reg1033823.p2	4.347	+	NM_001130703 NM_001130704 NM_001130705 NM_014269 AK292410 BC036070	-591148	+	U93917 BC036086 NM_001042543 NM_006529	-680261	-	AK300524 NM_000860 NM_001145816	-986890	-	CU692222 CU692662 DQ892372 DQ895581 TSC_hg19_v1_chr4_-_176733403	302712	-	BC010461 BC022508 TSC_hg19_v1_chr4_-_176733419 D49958	302760	-	BC044612 BC053954 TSC_hg19_v1_chr4_-_176733905	303225	-	NM_001130703|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130704|ADAM29|11086|ADAM metallopeptidase domain 29##NM_001130705|ADAM29|11086|ADAM metallopeptidase domain 29##NM_014269|ADAM29|11086|ADAM metallopeptidase domain 29##AK292410|ADAM29|11086|ADAM metallopeptidase domain 29##BC036070|ADAM29|11086|ADAM metallopeptidase domain 29##U93917|GLRA3|8001|glycine receptor, alpha 3##BC036086|GLRA3|8001|glycine receptor, alpha 3##NM_001042543|GLRA3|8001|glycine receptor, alpha 3##NM_006529|GLRA3|8001|glycine receptor, alpha 3##AK300524|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_000860|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##NM_001145816|HPGD|3248|hydroxyprostaglandin dehydrogenase 15-(NAD)##DQ892372|GPM6A|2823|glycoprotein M6A##DQ895581|GPM6A|2823|glycoprotein M6A##BC010461|GPM6A|2823|glycoprotein M6A##BC022508|GPM6A|2823|glycoprotein M6A##D49958|GPM6A|2823|glycoprotein M6A##BC044612|GPM6A|2823|glycoprotein M6A##BC053954|GPM6A|2823|glycoprotein M6A	0.93938	CTCF.p2:-21:0.939
chr1	160538010	160538190	reg1033680.p2	4.346	+	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	-45071	-	NM_020335 TSC_hg19_v1_chr1_+_160370394	-167721	+	M96739 AK313700 NM_005598 BC013789	-201236	+	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	11147	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	11188	-	AK314244 NM_003037 BC012602	78963	-	AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1	0.0	
chr1	25466694	25466875	reg1028171.p2	4.346	+	BC013362 AK310945 NM_001031680 AF022726	-175242	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-209998	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-210045	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	92203	-	BC065040 TSC_hg19_v1_chr1_-_25573922	107139	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	107189	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr6	22271435	22271536	reg1028203.p2	4.346	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	-604826	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	-677113	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1736762	+	BC015850 NM_000948	26244	-	X54394 X54393 GQ305133 M58594 NM_001163558	31562	-	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	298240	+	AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1	0.0	
chr9	116208882	116209036	reg1001244.p2	4.346	+	AK128127 NM_144488	-1949	+	AK074762 NM_017443	-35970	-	AK313867 TSC_hg19_v1_chr9_+_116172965 BC033037 AK301872 BC026884 NM_152786	-35982	+	TSC_hg19_v1_chr9_+_116226007 AK125059 NM_017790 AK074977	17055	+	AF463495 NM_130795 AK096840 BC042555 CU692096 AF490840	54822	+	TSC_hg19_v1_chr9_+_116327336 AK289666 AK301515 AK310705 NM_134427	118373	+	AK128127|RGS3|5998|regulator of G-protein signaling 3##NM_144488|RGS3|5998|regulator of G-protein signaling 3##AK074762|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##NM_017443|POLE3|54107|polymerase (DNA directed), epsilon 3 (p17 subunit)##AK313867|C9orf43|257169|chromosome 9 open reading frame 43##BC033037|C9orf43|257169|chromosome 9 open reading frame 43##AK301872|C9orf43|257169|chromosome 9 open reading frame 43##BC026884|C9orf43|257169|chromosome 9 open reading frame 43##NM_152786|C9orf43|257169|chromosome 9 open reading frame 43##AK125059|RGS3|5998|regulator of G-protein signaling 3##NM_017790|RGS3|5998|regulator of G-protein signaling 3##AK074977|RGS3|5998|regulator of G-protein signaling 3##AF463495|RGS3|5998|regulator of G-protein signaling 3##NM_130795|RGS3|5998|regulator of G-protein signaling 3##AK096840|RGS3|5998|regulator of G-protein signaling 3##BC042555|RGS3|5998|regulator of G-protein signaling 3##AF490840|RGS3|5998|regulator of G-protein signaling 3##AK289666|RGS3|5998|regulator of G-protein signaling 3##AK301515|RGS3|5998|regulator of G-protein signaling 3##AK310705|RGS3|5998|regulator of G-protein signaling 3##NM_134427|RGS3|5998|regulator of G-protein signaling 3	0.0	
chr10	98047619	98047727	reg1028701.p2	4.345	+	AM180327 AM180328 AM180329 AM180330 AM180331 AM180332 AM180333 AM180334 AM180335 AM180336 AM180337 AM180338 AM180339 AM180340 AM180341 AM180342 AM180343 AM180344 AM180345 AM180346 BC018906 BC110298 AK027779 AF068180 AF068181 AK225546 NM_001114094 NM_013314	-16430	-	BC109045 BC109046 TSC_hg19_v1_chr10_+_97889812 AK095317 BC030967	-157931	+	TSC_hg19_v1_chr10_+_97889471 CR627437 NM_014803 BC011627	-158177	+	NM_001017520 NM_004088 AB046378 AK313615 M26144 BC012920 AK223317 DQ891465 DQ894645	16495	+	AF367761 NM_001040102 NM_001040103 NM_033207	71401	-	AB384048 BC113577 BC112341 BC112366 AB023149 BC013871 BC030548 TSC_hg19_v1_chr10_-_98273674 AK026106 NM_012465	225890	-	AM180327|BLNK|29760|B-cell linker##AM180328|BLNK|29760|B-cell linker##AM180329|BLNK|29760|B-cell linker##AM180330|BLNK|29760|B-cell linker##AM180331|BLNK|29760|B-cell linker##AM180332|BLNK|29760|B-cell linker##AM180333|BLNK|29760|B-cell linker##AM180334|BLNK|29760|B-cell linker##AM180335|BLNK|29760|B-cell linker##AM180336|BLNK|29760|B-cell linker##AM180337|BLNK|29760|B-cell linker##AM180338|BLNK|29760|B-cell linker##AM180339|BLNK|29760|B-cell linker##AM180340|BLNK|29760|B-cell linker##AM180341|BLNK|29760|B-cell linker##AM180342|BLNK|29760|B-cell linker##AM180343|BLNK|29760|B-cell linker##AM180344|BLNK|29760|B-cell linker##AM180345|BLNK|29760|B-cell linker##AM180346|BLNK|29760|B-cell linker##BC018906|BLNK|29760|B-cell linker##BC110298|BLNK|29760|B-cell linker##AK027779|BLNK|29760|B-cell linker##AF068180|BLNK|29760|B-cell linker##AF068181|BLNK|29760|B-cell linker##AK225546|BLNK|29760|B-cell linker##NM_001114094|BLNK|29760|B-cell linker##NM_013314|BLNK|29760|B-cell linker##BC109045|ZNF518A|9849|zinc finger protein 518A##BC109046|ZNF518A|9849|zinc finger protein 518A##BC030967|ZNF518A|9849|zinc finger protein 518A##CR627437|ZNF518A|9849|zinc finger protein 518A##NM_014803|ZNF518A|9849|zinc finger protein 518A##NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal##NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal##AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal##AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal##M26144|DNTT|1791|deoxynucleotidyltransferase, terminal##BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal##AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal##AF367761|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040102|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_001040103|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##NM_033207|OPALIN|93377|oligodendrocytic myelin paranodal and inner loop protein##BC113577|TLL2|7093|tolloid-like 2##BC112341|TLL2|7093|tolloid-like 2##BC112366|TLL2|7093|tolloid-like 2##AB023149|TLL2|7093|tolloid-like 2##BC013871|TLL2|7093|tolloid-like 2##BC030548|TLL2|7093|tolloid-like 2##AK026106|TLL2|7093|tolloid-like 2##NM_012465|TLL2|7093|tolloid-like 2	0.0	
chr11	35160578	35160696	reg1032928.p2	4.345	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	-237	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-222480	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-222748	-	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	97	+	TSC_hg19_v1_chr11_+_35160821 M59040	181	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	223	+	AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)##AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr1	211822484	211822612	reg1034319.p1	4.345	+	TSC_hg19_v1_chr1_-_211752056 BC121015 BC121016 NM_021194	-70460	-	AB451467 TSC_hg19_v1_chr1_-_211752048	-70548	-	AF364518 TSC_hg19_v1_chr1_-_211751805	-70786	-	BT019729 CU688108 AB527570 AY045701 Z29066 AK223353 AK225522 AK303092 TSC_hg19_v1_chr1_-_211848968 U11050 BC043502 BC065932 BC052807 NM_001204182 NM_001204183 NM_002497	26360	-	BC034621 TSC_hg19_v1_chr1_-_212003681	181200	-	D86960 NM_014873 TSC_hg19_v1_chr1_-_212004119	181582	-	BC121015|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121016|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##NM_021194|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AF364518|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BT019729|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AY045701|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##Z29066|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK223353|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK225522|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK303092|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##U11050|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC043502|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC065932|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC052807|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204182|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204183|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_002497|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC034621|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1	0.690044	CTCF.p2:0:0.690
chr17	61627381	61627541	reg1030261.p2	4.345	+	TSC_hg19_v1_chr17_+_61600692 AK091877 AX747233 NM_030779 NM_173092 BC006334 AK298363 AK296498 AF311913	-26737	+	NM_001178057 NM_152830 BC036375 X16295 AK301988 AK302019 M26657 M29981	-65270	+	TSC_hg19_v1_chr17_+_61554421 AK296566 AK309514 NM_000789 AK300516 AB208971 J04144	-73033	+	TSC_hg19_v1_chr17_+_61627834 AK294925 NM_005828	365	+	TSC_hg19_v1_chr17_+_61627843 BC001264	384	+	TSC_hg19_v1_chr17_+_61627855 AK303212	403	+	AK091877|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##NM_030779|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##NM_173092|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##BC006334|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##AK298363|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##AK296498|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##AF311913|KCNH6|81033|potassium voltage-gated channel, subfamily H (eag-related), member 6##NM_001178057|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##NM_152830|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##X16295|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK301988|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK302019|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##M26657|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##M29981|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK296566|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK309514|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##NM_000789|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK300516|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AB208971|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##J04144|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK294925|DCAF7|10238|DDB1 and CUL4 associated factor 7##NM_005828|DCAF7|10238|DDB1 and CUL4 associated factor 7##BC001264|DCAF7|10238|DDB1 and CUL4 associated factor 7##AK303212|DCAF7|10238|DDB1 and CUL4 associated factor 7	0.0	
chr19	10530439	10530578	reg1030276.p2	4.345	+	AY593872 NM_001243121 TSC_hg19_v1_chr19_+_10527555	-3005	+	TSC_hg19_v1_chr19_-_10514250 NM_007065	-16252	-	TSC_hg19_v1_chr19_-_10514219 BC000083 BC008793 U63131	-16295	-	TSC_hg19_v1_chr19_+_10531189 L20965 NM_001111307	722	+	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	10919	+	AF073745 NM_001111309	12602	+	AY593872|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001243121|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_007065|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC000083|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC008793|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U63131|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##L20965|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111307|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AF073745|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111309|PDE4A|5141|phosphodiesterase 4A, cAMP-specific	0.0	
chr19	3361085	3361197	reg1027528.p2	4.345	+	TSC_hg19_v1_chr19_+_3359531 NM_001245005 NM_205843 X12492 AK304816 AK289885	-1685	+	BC047522 DQ891648 DQ894837 TSC_hg19_v1_chr19_+_3224751 CU690430 AF329266	-136398	+	BC028101 NM_021938 AB209067 NM_001172673 TSC_hg19_v1_chr19_+_3224705	-136437	+	TSC_hg19_v1_chr19_+_3366562 NM_001245002 NM_001245004 NM_005597 BC012120	5414	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	5439	+	TSC_hg19_v1_chr19_+_3366607 X92857 AB590220 CU680224 DQ893655 DQ895795	5474	+	NM_001245005|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_205843|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X12492|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK304816|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK289885|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC047522|CELF5|60680|CUGBP, Elav-like family member 5##DQ891648|CELF5|60680|CUGBP, Elav-like family member 5##DQ894837|CELF5|60680|CUGBP, Elav-like family member 5##AF329266|CELF5|60680|CUGBP, Elav-like family member 5##BC028101|CELF5|60680|CUGBP, Elav-like family member 5##NM_021938|CELF5|60680|CUGBP, Elav-like family member 5##AB209067|CELF5|60680|CUGBP, Elav-like family member 5##NM_001172673|CELF5|60680|CUGBP, Elav-like family member 5##NM_001245002|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245004|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_005597|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC012120|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X92857|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ893655|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ895795|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)	0.073686	
chr19	6588786	6588966	reg1031300.p2	4.345	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	-57850	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-86559	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-107093	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	2156	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	2230	-	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	2282	-	NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule	0.0	
chr2	98487093	98487228	reg1035561.p1	4.345	+	AK025852 TSC_hg19_v1_chr2_-_98408976	-78238	-	AB083211 NM_207519	-136292	+	L05148 NM_001079 AK303341 AK310637 AK310628 BC053878	-157118	+	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	125026	-	TSC_hg19_v1_chr2_-_98612395 AK098792	125243	-	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	216486	+	AK025852|TMEM131|23505|transmembrane protein 131##AB083211|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_207519|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##L05148|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_001079|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK303341|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310637|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310628|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##BC053878|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##AK098792|TMEM131|23505|transmembrane protein 131##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B	0.0	
chr11	60681537	60681635	reg1028362.p2	4.344	+	NM_024092 AK303961 TSC_hg19_v1_chr11_+_60681578 AK313913	-107	+	TSC_hg19_v1_chr11_-_60674060 AJ131186 BC008719 BC018665 BC018698 NM_014502	-7535	-	CU679057 DQ893003 DQ896249 AB527521 TSC_hg19_v1_chr11_-_60674025 AF086469	-7643	-	TSC_hg19_v1_chr11_+_60681647 AX775851 BC001309 AX775849	82	+	TSC_hg19_v1_chr11_+_60691945 NM_017870 NM_178031 AK000546 BC114569 BC032059	10349	+	BC037974 BC025710 AF135600 AB020598 NM_016582	37600	-	NM_024092|TMEM109|79073|transmembrane protein 109##AK303961|TMEM109|79073|transmembrane protein 109##AK313913|TMEM109|79073|transmembrane protein 109##AJ131186|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC008719|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC018665|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##BC018698|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##NM_014502|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##DQ893003|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##DQ896249|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##AF086469|PRPF19|27339|PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)##AX775851|TMEM109|79073|transmembrane protein 109##BC001309|TMEM109|79073|transmembrane protein 109##AX775849|TMEM109|79073|transmembrane protein 109##NM_017870|TMEM132A|54972|transmembrane protein 132A##NM_178031|TMEM132A|54972|transmembrane protein 132A##AK000546|TMEM132A|54972|transmembrane protein 132A##BC114569|TMEM132A|54972|transmembrane protein 132A##BC032059|TMEM132A|54972|transmembrane protein 132A##BC037974|SLC15A3|51296|solute carrier family 15, member 3##BC025710|SLC15A3|51296|solute carrier family 15, member 3##AF135600|SLC15A3|51296|solute carrier family 15, member 3##AB020598|SLC15A3|51296|solute carrier family 15, member 3##NM_016582|SLC15A3|51296|solute carrier family 15, member 3	0.0	
chr15	75406912	75407063	reg1031893.p1	4.344	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-91006	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-91059	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-119080	+	AK128205 TSC_hg19_v1_chr15_+_75491259	84259	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	87225	+	BC110367 TSC_hg19_v1_chr15_+_75494233	87246	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chr16	14379730	14379910	reg1023723.p3	4.344	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-85622	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-99302	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-214734	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	344208	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	344313	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	346919	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.0	
chr17	48624506	48624687	reg1002079.p2	4.344	+	AK092731 TSC_hg19_v1_chr17_+_48624553 BC111029 AK025000 AK225189 AK291805 BC025255 NM_022827 BC065526 AK308616	-38	+	TSC_hg19_v1_chr17_+_48610095 AK000785 AK291658 AK292977 AK295730 AK296346 AK300642 BC001038 BC051365 BC077722	-14493	+	TSC_hg19_v1_chr17_+_48610049 NM_017957	-14549	+	TSC_hg19_v1_chr17_+_48638339 BC110995 AF124351 NM_018896 NM_198376 NM_198377 NM_198378 NM_198379 NM_198380 NM_198382 NM_198383 NM_198384 NM_198385 NM_198386 NM_198387 NM_198388 NM_198396 NM_198397	13797	+	TSC_hg19_v1_chr17_+_48712188 BC046126 NM_001144070 NM_003786 AF009670 Y17151 BC058907 AF085690 AF085691 AF085692 BC104952 BC137347 BC137348 AB208954 AF083552 AB010887 BC050370 AF104943 AB384796	87613	+	AK314010 CR627413 TSC_hg19_v1_chr17_-_48785180 BC012978 EU164539 NM_052855	160547	-	AK092731|SPATA20|64847|spermatogenesis associated 20##BC111029|SPATA20|64847|spermatogenesis associated 20##AK025000|SPATA20|64847|spermatogenesis associated 20##AK225189|SPATA20|64847|spermatogenesis associated 20##AK291805|SPATA20|64847|spermatogenesis associated 20##BC025255|SPATA20|64847|spermatogenesis associated 20##NM_022827|SPATA20|64847|spermatogenesis associated 20##BC065526|SPATA20|64847|spermatogenesis associated 20##AK308616|SPATA20|64847|spermatogenesis associated 20##AK000785|EPN3|55040|epsin 3##AK291658|EPN3|55040|epsin 3##AK292977|EPN3|55040|epsin 3##AK295730|EPN3|55040|epsin 3##AK296346|EPN3|55040|epsin 3##AK300642|EPN3|55040|epsin 3##BC001038|EPN3|55040|epsin 3##BC051365|EPN3|55040|epsin 3##BC077722|EPN3|55040|epsin 3##NM_017957|EPN3|55040|epsin 3##BC110995|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##AF124351|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_018896|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198376|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198377|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198378|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198379|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198380|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198382|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198383|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198384|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198385|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198386|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198387|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198388|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198396|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##NM_198397|CACNA1G|8913|calcium channel, voltage-dependent, T type, alpha 1G subunit##BC046126|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_001144070|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##NM_003786|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF009670|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##Y17151|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC058907|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085690|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085691|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF085692|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC104952|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137347|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC137348|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB208954|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF083552|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AB010887|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##BC050370|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AF104943|ABCC3|8714|ATP-binding cassette, sub-family C (CFTR/MRP), member 3##AK314010|ANKRD40|91369|ankyrin repeat domain 40##CR627413|ANKRD40|91369|ankyrin repeat domain 40##BC012978|ANKRD40|91369|ankyrin repeat domain 40##EU164539|ANKRD40|91369|ankyrin repeat domain 40##NM_052855|ANKRD40|91369|ankyrin repeat domain 40	0.0	
chr19	18811559	18811641	reg1032543.p1	4.344	+	AY360171 TSC_hg19_v1_chr19_+_18794489 BC028050 AB527764 CU688378 DQ893310 DQ894228 AB014516	-17077	+	TSC_hg19_v1_chr19_+_18794453 AK024089 AY040323 NM_001098482 NM_015321	-17176	+	TSC_hg19_v1_chr19_+_18747837 AK001940 AK222656 AK294074 NM_018316 BC026319	-63766	+	U75488 TSC_hg19_v1_chr19_-_18888853	77190	-	AB086984 BC033676 BC110847 L32137 BC125092 TSC_hg19_v1_chr19_-_18902115 AK074508 AK223216 AK290595 AK296586 AK297798 AK297814 NM_000095	90497	-	TSC_hg19_v1_chr19_+_18942742 NM_002911 BC039817	131145	+	AY360171|CRTC1|23373|CREB regulated transcription coactivator 1##BC028050|CRTC1|23373|CREB regulated transcription coactivator 1##DQ893310|CRTC1|23373|CREB regulated transcription coactivator 1##DQ894228|CRTC1|23373|CREB regulated transcription coactivator 1##AB014516|CRTC1|23373|CREB regulated transcription coactivator 1##AK024089|CRTC1|23373|CREB regulated transcription coactivator 1##AY040323|CRTC1|23373|CREB regulated transcription coactivator 1##NM_001098482|CRTC1|23373|CREB regulated transcription coactivator 1##NM_015321|CRTC1|23373|CREB regulated transcription coactivator 1##AK001940|KLHL26|55295|kelch-like 26 (Drosophila)##AK222656|KLHL26|55295|kelch-like 26 (Drosophila)##AK294074|KLHL26|55295|kelch-like 26 (Drosophila)##NM_018316|KLHL26|55295|kelch-like 26 (Drosophila)##BC026319|KLHL26|55295|kelch-like 26 (Drosophila)##AB086984|COMP|1311|cartilage oligomeric matrix protein##BC033676|COMP|1311|cartilage oligomeric matrix protein##BC110847|COMP|1311|cartilage oligomeric matrix protein##L32137|COMP|1311|cartilage oligomeric matrix protein##BC125092|COMP|1311|cartilage oligomeric matrix protein##AK074508|COMP|1311|cartilage oligomeric matrix protein##AK223216|COMP|1311|cartilage oligomeric matrix protein##AK290595|COMP|1311|cartilage oligomeric matrix protein##AK296586|COMP|1311|cartilage oligomeric matrix protein##AK297798|COMP|1311|cartilage oligomeric matrix protein##AK297814|COMP|1311|cartilage oligomeric matrix protein##NM_000095|COMP|1311|cartilage oligomeric matrix protein##NM_002911|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##BC039817|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)	0.0	
chr2	181845436	181845555	reg1034734.p2	4.344	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-125	+	TSC_hg19_v1_chr2_+_181845341 NM_182678 NM_006357	-270	+	BC031216 NM_020943 TSC_hg19_v1_chr2_-_180871834 AK025635 BC057826	-973681	-	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	148	+	TSC_hg19_v1_chr2_+_181845809 AK314145	332	+	NM_000885	476123	+	BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_182678|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_006357|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC031216|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##NM_020943|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##AK025635|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##BC057826|CWC22|57703|CWC22 spliceosome-associated protein homolog (S. cerevisiae)##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.491574	CTCF.p2:3:0.492
chr7	114067010	114067141	reg1032344.p1	4.344	+	AF467253 NM_001172767 NM_148899 U80741 AF467258 AF467259 TSC_hg19_v1_chr7_+_114066703	-445	+	TSC_hg19_v1_chr7_+_114055253 AF493430 AF337817 AF467257 BC126104 BC143866 BC143867	-11770	+	AK296957 TSC_hg19_v1_chr7_+_114055213	-11883	+	TSC_hg19_v1_chr7_+_114562148 AF054589 NM_001166345 NM_001166346 NM_199072	495099	+	BC040713 TSC_hg19_v1_chr7_+_114562979 AY196485	495881	+	AJ608795 NM_001244583	1541291	-	AF467253|FOXP2|93986|forkhead box P2##NM_001172767|FOXP2|93986|forkhead box P2##NM_148899|FOXP2|93986|forkhead box P2##AF467258|FOXP2|93986|forkhead box P2##AF467259|FOXP2|93986|forkhead box P2##AF493430|FOXP2|93986|forkhead box P2##AF337817|FOXP2|93986|forkhead box P2##AF467257|FOXP2|93986|forkhead box P2##BC126104|FOXP2|93986|forkhead box P2##BC143866|FOXP2|93986|forkhead box P2##BC143867|FOXP2|93986|forkhead box P2##AK296957|FOXP2|93986|forkhead box P2##AF054589|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166345|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166346|MDFIC|29969|MyoD family inhibitor domain containing##NM_199072|MDFIC|29969|MyoD family inhibitor domain containing##BC040713|MDFIC|29969|MyoD family inhibitor domain containing##AY196485|MDFIC|29969|MyoD family inhibitor domain containing##AJ608795|TFEC|22797|transcription factor EC##NM_001244583|TFEC|22797|transcription factor EC	0.824261	CTCF.p2:-4:0.824
chr7	20457557	20457633	reg1036093.p1	4.344	+	BC002630 NM_002214 M73780	-86861	+	AK295044 TSC_hg19_v1_chr7_+_20370337	-87258	+	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	-200615	-	AB353947 NM_001163941 AY230001	197702	+	AY851364 BC110370 NM_001163942 NM_001163993 NM_178559 BC044248 AY090613 AY234788 AY851365 BC104894 BC104920	229496	+	TSC_hg19_v1_chr7_-_20825382 AB464710	367787	-	BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8##AK295044|ITGB8|3696|integrin, beta 8##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##AB353947|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163941|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY230001|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY851364|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC110370|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163942|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163993|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_178559|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC044248|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY090613|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY234788|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY851365|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC104894|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC104920|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	0.0	
chr8	8241240	8241343	reg1034091.p1	4.344	+	AK122582 NM_001080826	-2069	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-65403	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-155149	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	318407	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	509647	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	619074	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.876759	CTCF.p2:1:0.877
chr10	125919528	125919661	reg1032958.p1	4.343	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	-66441	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-67695	-	BC137492 BC146862 AY358565 NM_198148	-268098	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	187879	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	187924	-	NM_001146340 TSC_hg19_v1_chr10_-_126138606	218983	-	BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##NM_001146340|NKX1-2|390010|NK1 homeobox 2	0.0	
chr11	117781455	117781565	reg1026127.p1	4.343	+	NM_001164831	-33310	-	TSC_hg19_v1_chr11_-_117747623 AK289629 NM_001164832 NM_001164836 NM_001164837 NM_001204268 NM_001243598 NM_022003	-33829	-	AL136699 TSC_hg19_v1_chr11_-_117747374 AY358976 BC018652 BC093040 AK311736 AL832811 AK290757	-34121	-	BC018715 AK300283 AB048796 AB048797 BC114928 AY190317 AK027798 TSC_hg19_v1_chr11_-_117800150 NM_001077263 NM_001206789 NM_001206790 NM_001244995	18607	-	TSC_hg19_v1_chr11_+_117857108 AK291645 AK301484 NM_001558 AK301260 AK316342 AK313049 AK301492	75580	+	TSC_hg19_v1_chr11_+_117857155 U00672 BC028082 AB590303 CU688390 DQ891031 DQ893720 AK316146 AB209626	75777	+	NM_001164831|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK289629|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164832|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164836|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164837|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001204268|FXYD6-FXYD2|100533181|FXYD6-FXYD2 readthrough##NM_001243598|FXYD6-FXYD2|100533181|FXYD6-FXYD2 readthrough##NM_022003|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6##AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018715|TMPRSS13|84000|transmembrane protease, serine 13##AK300283|TMPRSS13|84000|transmembrane protease, serine 13##AB048796|TMPRSS13|84000|transmembrane protease, serine 13##AB048797|TMPRSS13|84000|transmembrane protease, serine 13##BC114928|TMPRSS13|84000|transmembrane protease, serine 13##AY190317|TMPRSS13|84000|transmembrane protease, serine 13##AK027798|TMPRSS13|84000|transmembrane protease, serine 13##NM_001077263|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206789|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206790|TMPRSS13|84000|transmembrane protease, serine 13##NM_001244995|TMPRSS13|84000|transmembrane protease, serine 13##AK291645|IL10RA|3587|interleukin 10 receptor, alpha##AK301484|IL10RA|3587|interleukin 10 receptor, alpha##NM_001558|IL10RA|3587|interleukin 10 receptor, alpha##AK301260|IL10RA|3587|interleukin 10 receptor, alpha##AK316342|IL10RA|3587|interleukin 10 receptor, alpha##AK313049|IL10RA|3587|interleukin 10 receptor, alpha##AK301492|IL10RA|3587|interleukin 10 receptor, alpha##U00672|IL10RA|3587|interleukin 10 receptor, alpha##BC028082|IL10RA|3587|interleukin 10 receptor, alpha##DQ891031|IL10RA|3587|interleukin 10 receptor, alpha##DQ893720|IL10RA|3587|interleukin 10 receptor, alpha##AK316146|IL10RA|3587|interleukin 10 receptor, alpha##AB209626|IL10RA|3587|interleukin 10 receptor, alpha	0.51209	CTCF.p2:-39:0.512
chr14	31677284	31677465	reg1024439.p2	4.343	+	TSC_hg19_v1_chr14_-_31676920 BC016947	-439	-	TSC_hg19_v1_chr14_-_31676690 NM_015382	-689	-	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	-181804	-	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	212387	-	TSC_hg19_v1_chr14_-_31926633 BC010618 AK302829 AK055367 NM_080664	249301	-	GQ981321 GQ981322 NM_001197184	279776	-	NM_015382|HECTD1|25831|HECT domain containing 1##BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3##BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A##BC010618|C14orf126|112487|chromosome 14 open reading frame 126##AK055367|C14orf126|112487|chromosome 14 open reading frame 126##NM_080664|C14orf126|112487|chromosome 14 open reading frame 126##GQ981321|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##GQ981322|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##NM_001197184|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)	0.015409	
chr2	113191017	113191197	reg1001744.p1	4.343	+	TSC_hg19_v1_chr2_+_113033193 AK131416	-157905	+	TSC_hg19_v1_chr2_+_113033173 NM_198581	-157946	+	BC032001 AK315329 AF334161 NM_032494	-178475	-	NM_005054 U64675 NM_001164463	56	-	TSC_hg19_v1_chr2_+_113239732 BC036819	48619	+	TSC_hg19_v1_chr2_+_113239762 NM_153712	48659	+	AK131416|ZC3H6|376940|zinc finger CCCH-type containing 6##NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6##BC032001|ZC3H8|84524|zinc finger CCCH-type containing 8##AK315329|ZC3H8|84524|zinc finger CCCH-type containing 8##AF334161|ZC3H8|84524|zinc finger CCCH-type containing 8##NM_032494|ZC3H8|84524|zinc finger CCCH-type containing 8##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001164463|RGPD8|727851|RANBP2-like and GRIP domain containing 8##BC036819|TTL|150465|tubulin tyrosine ligase##NM_153712|TTL|150465|tubulin tyrosine ligase	0.0	
chr2	132249968	132250137	reg1017684.p1	4.343	+	BC063024 TSC_hg19_v1_chr2_-_132249961 BC018206	-96	-	NM_080386 AK093116 AX747933 AK292253 BC057810	-16416	+	NM_001077637	-128322	-	TSC_hg19_v1_chr2_-_132250072 NM_001085365	9	-	AK304811 TSC_hg19_v1_chr2_+_132250648 AK293811 AK300337 AK303293 AK308371 BC093080	533	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	35454	+	BC063024|MZT2A|653784|mitotic spindle organizing protein 2A##BC018206|MZT2A|653784|mitotic spindle organizing protein 2A##NM_080386|TUBA3D|113457|tubulin, alpha 3d##AK093116|TUBA3D|113457|tubulin, alpha 3d##AK292253|TUBA3D|113457|tubulin, alpha 3d##BC057810|TUBA3D|113457|tubulin, alpha 3d##NM_001077637|WTH3DI|150786|RAB6C-like##NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A##AK304811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK293811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK300337|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK303293|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK308371|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC093080|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A	0.84739	CTCF.p2:-58:0.847
chr4	185317194	185317375	reg1032190.p1	4.343	+	BC035035 AY358676 AK057370 NM_153343	-178219	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-489373	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-489464	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	78397	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	253317	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	253549	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr5	126908811	126908929	reg1029820.p2	4.343	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	-49676	+	NM_130809 TSC_hg19_v1_chr5_+_126853331 AL831963 AL832056 AL832600 AJ427339 AJ441110 AJ496322 AJ515158 AJ515428 AJ515429 AK057437 BC017066	-55519	+	NM_032446 CR749437 AK307919 BC020198 AB058676 BC152478	-282336	+	NM_001048252 AB219764	75853	+	NM_001127385 AB219832 BC071790	79855	+	TSC_hg19_v1_chr5_-_127418765 AF088062 BX648677 BC036629	509893	-	AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1##NM_130809|PRRC1|133619|proline-rich coiled-coil 1##AL831963|PRRC1|133619|proline-rich coiled-coil 1##AL832056|PRRC1|133619|proline-rich coiled-coil 1##AL832600|PRRC1|133619|proline-rich coiled-coil 1##AJ427339|PRRC1|133619|proline-rich coiled-coil 1##AJ441110|PRRC1|133619|proline-rich coiled-coil 1##AJ496322|PRRC1|133619|proline-rich coiled-coil 1##AJ515158|PRRC1|133619|proline-rich coiled-coil 1##AJ515428|PRRC1|133619|proline-rich coiled-coil 1##AJ515429|PRRC1|133619|proline-rich coiled-coil 1##AK057437|PRRC1|133619|proline-rich coiled-coil 1##BC017066|PRRC1|133619|proline-rich coiled-coil 1##NM_032446|MEGF10|84466|multiple EGF-like-domains 10##CR749437|MEGF10|84466|multiple EGF-like-domains 10##AK307919|MEGF10|84466|multiple EGF-like-domains 10##BC020198|MEGF10|84466|multiple EGF-like-domains 10##AB058676|MEGF10|84466|multiple EGF-like-domains 10##BC152478|MEGF10|84466|multiple EGF-like-domains 10##NM_001048252|CTXN3|613212|cortexin 3##AB219764|CTXN3|613212|cortexin 3##NM_001127385|CTXN3|613212|cortexin 3##AB219832|CTXN3|613212|cortexin 3##BC071790|CTXN3|613212|cortexin 3##AF088062|FLJ33630|644873|uncharacterized LOC644873##BX648677|FLJ33630|644873|uncharacterized LOC644873##BC036629|FLJ33630|644873|uncharacterized LOC644873	0.357529	CTCF.p2:6:0.358
chr6	42011868	42011979	reg1000448.p1	4.343	+	AB385206 CR542246 DQ891748 DQ895130 BC011616 M90814 TSC_hg19_v1_chr6_-_41909544 AK315421 AK299187 M92287 NM_001136125 NM_001760	-102424	-	TSC_hg19_v1_chr6_+_41889236 CU690756	-122656	+	TSC_hg19_v1_chr6_+_41889209 AK314147 BC007340	-122714	+	TSC_hg19_v1_chr6_-_42016453 AK303452 AB209825 AK057206 AK097856	4495	-	NM_001136017 NM_001136126	4686	-	BC033728 NM_138572 TSC_hg19_v1_chr6_+_42018261 AK057383 BC119678 BC119679 AL833401	6333	+	CR542246|CCND3|896|cyclin D3##DQ891748|CCND3|896|cyclin D3##DQ895130|CCND3|896|cyclin D3##BC011616|CCND3|896|cyclin D3##M90814|CCND3|896|cyclin D3##AK315421|CCND3|896|cyclin D3##AK299187|CCND3|896|cyclin D3##M92287|CCND3|896|cyclin D3##NM_001136125|CCND3|896|cyclin D3##NM_001760|CCND3|896|cyclin D3##AK314147|BYSL|705|bystin-like##BC007340|BYSL|705|bystin-like##AK303452|CCND3|896|cyclin D3##AB209825|CCND3|896|cyclin D3##AK057206|CCND3|896|cyclin D3##AK097856|CCND3|896|cyclin D3##NM_001136017|CCND3|896|cyclin D3##NM_001136126|CCND3|896|cyclin D3##BC033728|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##NM_138572|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AK057383|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119678|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119679|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AL833401|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa	0.0	
chr9	81436198	81436311	reg1032965.p1	4.343	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	-524196	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	-585224	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-790070	-	TSC_hg19_v1_chr9_+_82186879 NM_007005	750632	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	751270	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	751431	+	AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.013884	
chr1	196692618	196692723	reg1032087.p1	4.342	+	NM_000186 NM_001014975 TSC_hg19_v1_chr1_+_196621172 AK291395 AK225649 X07523 Y00716 BC037285 BC012610 BC110643 BC073982 BC142699 CU691466	-71543	+	TSC_hg19_v1_chr1_-_196577676 AK131498	-114988	-	EU251076 BC103947 BC103948 BC103949 BC103950 AY359444 NM_198503 BX647852 AK309729 TSC_hg19_v1_chr1_-_196577612	-115145	-	BC029390 NM_001166624 NM_021023 BC070259 AK298459 BC020680 BC020687 BC058009 X68679 CU676644 CU687072 CU691286	51302	+	NM_002113 BC107771 AK311681 AK290830 BC016755 M65292 M65293 X56210 AB590260 DQ892762 DQ896007 X56209	96251	+	AK292752 NM_001201550 NM_001201551 NM_006684 X98337 AJ640130 BC074957	164517	+	NM_000186|CFH|3075|complement factor H##NM_001014975|CFH|3075|complement factor H##AK291395|CFH|3075|complement factor H##AK225649|CFH|3075|complement factor H##X07523|CFH|3075|complement factor H##Y00716|CFH|3075|complement factor H##BC037285|CFH|3075|complement factor H##BC012610|CFH|3075|complement factor H##BC110643|CFH|3075|complement factor H##BC073982|CFH|3075|complement factor H##BC142699|CFH|3075|complement factor H##AK131498|KCNT2|343450|potassium channel, subfamily T, member 2##EU251076|KCNT2|343450|potassium channel, subfamily T, member 2##BC103947|KCNT2|343450|potassium channel, subfamily T, member 2##BC103948|KCNT2|343450|potassium channel, subfamily T, member 2##BC103949|KCNT2|343450|potassium channel, subfamily T, member 2##BC103950|KCNT2|343450|potassium channel, subfamily T, member 2##AY359444|KCNT2|343450|potassium channel, subfamily T, member 2##NM_198503|KCNT2|343450|potassium channel, subfamily T, member 2##BX647852|KCNT2|343450|potassium channel, subfamily T, member 2##AK309729|KCNT2|343450|potassium channel, subfamily T, member 2##NM_001166624|CFHR3|10878|complement factor H-related 3##NM_021023|CFHR3|10878|complement factor H-related 3##BC070259|CFHR3|10878|complement factor H-related 3##AK298459|CFHR3|10878|complement factor H-related 3##BC020680|CFHR3|10878|complement factor H-related 3##BC020687|CFHR3|10878|complement factor H-related 3##BC058009|CFHR3|10878|complement factor H-related 3##X68679|CFHR3|10878|complement factor H-related 3##NM_002113|CFHR1|3078|complement factor H-related 1##BC107771|CFHR1|3078|complement factor H-related 1##AK290830|CFHR1|3078|complement factor H-related 1##BC016755|CFHR1|3078|complement factor H-related 1##M65292|CFHR1|3078|complement factor H-related 1##M65293|CFHR1|3078|complement factor H-related 1##X56210|CFHR1|3078|complement factor H-related 1##DQ892762|CFHR1|3078|complement factor H-related 1##DQ896007|CFHR1|3078|complement factor H-related 1##X56209|CFHR1|3078|complement factor H-related 1##AK292752|CFHR4|10877|complement factor H-related 4##NM_001201550|CFHR4|10877|complement factor H-related 4##NM_001201551|CFHR4|10877|complement factor H-related 4##NM_006684|CFHR4|10877|complement factor H-related 4##X98337|CFHR4|10877|complement factor H-related 4##AJ640130|CFHR4|10877|complement factor H-related 4##BC074957|CFHR4|10877|complement factor H-related 4	0.834765	CTCF.p2:-4:0.835
chr12	9514726	9514907	reg1029026.p2	4.342	+	TSC_hg19_v1_chr12_+_9436619 AK123583 AK309820	-78191	+	BC111756 AK313639 NM_002864 X54380	-153854	-	TSC_hg19_v1_chr12_-_9268536 NM_000014	-246258	-	TSC_hg19_v1_chr12_-_9600810 BC035635 BC128040 BC111733	85982	-	BC027885 BC113997 BC114516 U11276 NM_002258 AK292022	245680	-	TSC_hg19_v1_chr12_+_9800760 AK096274	286080	+	AK309820|LOC642846|642846|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like##BC111756|PZP|5858|pregnancy-zone protein##AK313639|PZP|5858|pregnancy-zone protein##NM_002864|PZP|5858|pregnancy-zone protein##X54380|PZP|5858|pregnancy-zone protein##NM_000014|A2M|2|alpha-2-macroglobulin##BC035635|DDX12P|440081|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12, pseudogene##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK096274|LOC374443|374443|CLR pseudogene	0.0	
chr14	23831575	23831733	reg1038305.p1	4.342	+	TSC_hg19_v1_chr14_-_23822095 BX161416 NM_016609 BC030559	-9579	-	AB529096 DQ658848 BC020565 NM_020372	-10204	-	TSC_hg19_v1_chr14_+_23790671 BX247976 BC010939	-40980	+	CU689846 AB527771 TSC_hg19_v1_chr14_-_23834325	2647	-	TSC_hg19_v1_chr14_-_23834382 BC034246	2730	-	TSC_hg19_v1_chr14_-_23834401 AK314221	2746	-	BX161416|SLC22A17|51310|solute carrier family 22, member 17##NM_016609|SLC22A17|51310|solute carrier family 22, member 17##BC030559|SLC22A17|51310|solute carrier family 22, member 17##DQ658848|SLC22A17|51310|solute carrier family 22, member 17##BC020565|SLC22A17|51310|solute carrier family 22, member 17##NM_020372|SLC22A17|51310|solute carrier family 22, member 17##BX247976|PABPN1|8106|poly(A) binding protein, nuclear 1##BC010939|PABPN1|8106|poly(A) binding protein, nuclear 1##BC034246|EFS|10278|embryonal Fyn-associated substrate##AK314221|EFS|10278|embryonal Fyn-associated substrate	0.980576	CTCF.p2:0:0.981
chr14	62103592	62103702	reg1032405.p1	4.342	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-315120	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-355125	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-355453	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	58543	+	FJ790247 NM_001243084	60692	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	125472	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.0	
chr3	195910350	195910448	reg1029733.p1	4.342	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-101383	-	TSC_hg19_v1_chr3_-_195808984 M11507	-101416	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-101438	-	BC034801 BC022078 NM_001039617 AK122907	27882	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	32995	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	104136	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr10	64564249	64564387	reg1024822.p2	4.341	+	AJ505150 NM_199452	-284112	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-430275	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-535779	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	224	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	339	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	11779	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.010078	
chr10	81963297	81963392	reg1030163.p1	4.341	+	TSC_hg19_v1_chr10_+_81892497 HQ258029 EU446996	-70839	+	BC117332 BC117334 TSC_hg19_v1_chr10_+_81892485	-70887	+	BC066348 BC090922 NM_001012973	-71087	+	BC007564 TSC_hg19_v1_chr10_-_81965258 L19605 AB209770	1849	-	TSC_hg19_v1_chr10_-_81965287 AK298362	1937	-	TSC_hg19_v1_chr10_-_81965288 AK222918	1945	-	HQ258029|PLAC9|219348|placenta-specific 9##EU446996|PLAC9|219348|placenta-specific 9##BC117332|PLAC9|219348|placenta-specific 9##BC117334|PLAC9|219348|placenta-specific 9##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9##BC007564|ANXA11|311|annexin A11##L19605|ANXA11|311|annexin A11##AB209770|ANXA11|311|annexin A11##AK298362|ANXA11|311|annexin A11##AK222918|ANXA11|311|annexin A11	0.833295	CTCF.p2:-1:0.833
chr1	156163515	156163594	reg1030545.p1	4.341	+	NM_001193300 NM_022367 AK296693 TSC_hg19_v1_chr1_+_156123375 AK091127 AK290353 AX746794 NM_001193302 AK315547 BX640891 BC020974	-40200	+	NM_001193301 AY358531	-43783	+	TSC_hg19_v1_chr1_+_156084585 AY528714 AB527090 EU831758 EU831836 EU832167 EU832261 CU677029 CU678414 AY847595 AY847596 AY847597	-78910	+	TSC_hg19_v1_chr1_+_156163725 NM_014655	184	+	TSC_hg19_v1_chr1_+_156163907 AK074912 AK299747 AK307968 AK309678 AK309690 BC008843 AK075002 AK294524 AK293778	338	+	TSC_hg19_v1_chr1_+_156163911 AB007915 BC039854	364	+	NM_001193300|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_022367|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK296693|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK091127|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK290353|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_001193302|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK315547|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##BX640891|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##BC020974|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_001193301|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AY358531|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AY528714|LMNA|4000|lamin A/C##EU831758|LMNA|4000|lamin A/C##EU831836|LMNA|4000|lamin A/C##EU832167|LMNA|4000|lamin A/C##EU832261|LMNA|4000|lamin A/C##AY847595|LMNA|4000|lamin A/C##AY847596|LMNA|4000|lamin A/C##AY847597|LMNA|4000|lamin A/C##NM_014655|SLC25A44|9673|solute carrier family 25, member 44##AK074912|SLC25A44|9673|solute carrier family 25, member 44##AK299747|SLC25A44|9673|solute carrier family 25, member 44##AK307968|SLC25A44|9673|solute carrier family 25, member 44##AK309678|SLC25A44|9673|solute carrier family 25, member 44##AK309690|SLC25A44|9673|solute carrier family 25, member 44##BC008843|SLC25A44|9673|solute carrier family 25, member 44##AK075002|SLC25A44|9673|solute carrier family 25, member 44##AK294524|SLC25A44|9673|solute carrier family 25, member 44##AB007915|SLC25A44|9673|solute carrier family 25, member 44##BC039854|SLC25A44|9673|solute carrier family 25, member 44	0.0	
chr12	96589356	96589536	reg1034434.p2	4.341	+	TSC_hg19_v1_chr12_+_96588254 BC017371	-1179	+	TSC_hg19_v1_chr12_+_96588154 NM_005230 Z36715 AK312694	-1320	+	AK301308 TSC_hg19_v1_chr12_-_96429399 AK310522 AK293630	-160031	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	204537	-	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	204871	-	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	711585	+	BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##NM_005230|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##Z36715|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK312694|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK301308|LTA4H|4048|leukotriene A4 hydrolase##AK293630|LTA4H|4048|leukotriene A4 hydrolase##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1	0.0	
chr16	5112982	5113091	reg1031912.p1	4.341	+	TSC_hg19_v1_chr16_-_5083937 AK127952 AK314320 AK302916 AK025570 NM_016256	-29099	-	TSC_hg19_v1_chr16_-_5083927 AF187072 AK026122 BC012194	-29115	-	TSC_hg19_v1_chr16_+_5083673 AK055222	-29350	+	AK300708 TSC_hg19_v1_chr16_-_5115921	2884	-	TSC_hg19_v1_chr16_-_5115951 AK075242	2919	-	TSC_hg19_v1_chr16_-_5116030 BC033681 AY358483 NM_001098514 NM_152459	3051	-	AK127952|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK314320|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK302916|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK025570|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##NM_016256|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AF187072|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK026122|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##BC012194|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK055222|LOC100507589|100507589|uncharacterized LOC100507589##AK300708|C16orf89|146556|chromosome 16 open reading frame 89##AK075242|C16orf89|146556|chromosome 16 open reading frame 89##BC033681|C16orf89|146556|chromosome 16 open reading frame 89##AY358483|C16orf89|146556|chromosome 16 open reading frame 89##NM_001098514|C16orf89|146556|chromosome 16 open reading frame 89##NM_152459|C16orf89|146556|chromosome 16 open reading frame 89	0.911096	CTCF.p2:-20:0.911
chr17	75262999	75263138	reg1032883.p1	4.341	+	AK293206 NM_001144001	-81774	+	TSC_hg19_v1_chr17_+_75137104 AK290913 BC142979 BC136523 BC136525	-125933	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	-126034	+	NM_001113491 AF189713 TSC_hg19_v1_chr17_+_75277583 AJ312323 AK300270 AK300268 BC054004	14474	+	AK290368 NM_001113492 TSC_hg19_v1_chr17_+_75283980	20911	+	TSC_hg19_v1_chr17_+_75315629 AJ312321 NM_006640	52542	+	AK293206|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001144001|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AK290913|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC142979|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136523|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136525|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001113491|SEPT9|10801|septin 9##AF189713|SEPT9|10801|septin 9##AJ312323|SEPT9|10801|septin 9##AK300270|SEPT9|10801|septin 9##AK300268|SEPT9|10801|septin 9##BC054004|SEPT9|10801|septin 9##AK290368|SEPT9|10801|septin 9##NM_001113492|SEPT9|10801|septin 9##AJ312321|SEPT9|10801|septin 9##NM_006640|SEPT9|10801|septin 9	0.0	
chr2	182043637	182043777	reg1032482.p2	4.341	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-197880	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-198064	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-198337	+	NM_000885	277911	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	278343	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	278615	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.0	
chr10	81549278	81549371	reg1029328.p2	4.340	+	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	-178620	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	-229173	-	BC070048 NM_001099692	-276968	+	BC022318 NM_003019	159536	-	TSC_hg19_v1_chr10_+_81838420 AK222536 AK023325 BC022252 NM_025125 CR457310	289112	+	BC066348 BC090922 NM_001012973	342933	+	AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##BC022318|SFTPD|6441|surfactant protein D##NM_003019|SFTPD|6441|surfactant protein D##AK222536|FAM213A|80195|family with sequence similarity 213, member A##AK023325|FAM213A|80195|family with sequence similarity 213, member A##BC022252|FAM213A|80195|family with sequence similarity 213, member A##NM_025125|FAM213A|80195|family with sequence similarity 213, member A##CR457310|FAM213A|80195|family with sequence similarity 213, member A##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9	0.984009	CTCF.p2:-3:0.984
chr1	153467855	153467932	reg1000549.p2	4.340	+	BC034687 M86757 NM_002963	-34773	-	NM_001045479	-55391	-	AY189118 NM_176823	-78894	+	TSC_hg19_v1_chr1_-_153508468 AK312088 D28464	40572	-	TSC_hg19_v1_chr1_-_153508522 BC001431	40639	-	TSC_hg19_v1_chr1_-_153508622 BC009017 NM_014624	40763	-	BC034687|S100A7|6278|S100 calcium binding protein A7##M86757|S100A7|6278|S100 calcium binding protein A7##NM_002963|S100A7|6278|S100 calcium binding protein A7##NM_001045479|S100A7L2|645922|S100 calcium binding protein A7-like 2##AY189118|S100A7A|338324|S100 calcium binding protein A7A##NM_176823|S100A7A|338324|S100 calcium binding protein A7A##AK312088|S100A6|6277|S100 calcium binding protein A6##D28464|S100A6|6277|S100 calcium binding protein A6##BC001431|S100A6|6277|S100 calcium binding protein A6##BC009017|S100A6|6277|S100 calcium binding protein A6##NM_014624|S100A6|6277|S100 calcium binding protein A6	0.036515	
chr12	124086528	124086709	reg1023947.p2	4.340	+	TSC_hg19_v1_chr12_+_124069100 X92098 BC025957 CU693080 CR541663 CR541682	-17477	+	TSC_hg19_v1_chr12_+_124069098 AK298167 AK312975 AK303189	-17529	+	TSC_hg19_v1_chr12_+_124069077 NM_006815	-17553	+	TSC_hg19_v1_chr12_+_124086677 AK307384 AK301043 AK074219 NM_020936 AL833756 BC030020 CU688806	56	+	CR456831 AB528638 BC104188 BC104189 X95648 TSC_hg19_v1_chr12_-_124118195 BC103763	31531	-	TSC_hg19_v1_chr12_-_124118210 AK294815 NM_001414	31641	-	X92098|TMED2|10959|transmembrane emp24 domain trafficking protein 2##BC025957|TMED2|10959|transmembrane emp24 domain trafficking protein 2##CR541663|TMED2|10959|transmembrane emp24 domain trafficking protein 2##CR541682|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK298167|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK312975|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK303189|TMED2|10959|transmembrane emp24 domain trafficking protein 2##NM_006815|TMED2|10959|transmembrane emp24 domain trafficking protein 2##AK307384|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##AK301043|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##AK074219|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##NM_020936|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##AL833756|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##BC030020|DDX55|57696|DEAD (Asp-Glu-Ala-Asp) box polypeptide 55##CR456831|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##BC104188|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##BC104189|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##X95648|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##BC103763|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##AK294815|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa##NM_001414|EIF2B1|1967|eukaryotic translation initiation factor 2B, subunit 1 alpha, 26kDa	0.0	
chr12	94469205	94469313	reg1034433.p1	4.340	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-398076	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-503658	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-504439	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	73245	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	384272	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	384383	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.661738	CTCF.p2:-3:0.662
chr13	61860417	61860548	reg1031732.p1	4.340	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-889003	+	BX537910 NM_001146071 NM_030794	-889892	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-1122381	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	128771	-	AK289924 NM_022843	129172	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	5944022	-	EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9	0.999561	CTCF.p2:-9:1.000
chr19	15027817	15027998	reg1029306.p1	4.340	+	HQ258148 NM_030901 BC101587 BC117357	-35693	-	NM_001005190	-75219	-	NM_017506	-88632	-	AB463980 NM_012377 BC110063	24392	+	NM_005071 U18244	55822	-	TSC_hg19_v1_chr19_-_15090354 BC028721 BC040604	62519	-	HQ258148|OR7A17|26333|olfactory receptor, family 7, subfamily A, member 17##NM_030901|OR7A17|26333|olfactory receptor, family 7, subfamily A, member 17##BC101587|OR7A17|26333|olfactory receptor, family 7, subfamily A, member 17##BC117357|OR7A17|26333|olfactory receptor, family 7, subfamily A, member 17##NM_001005190|OR7A10|390892|olfactory receptor, family 7, subfamily A, member 10##NM_017506|OR7A5|26659|olfactory receptor, family 7, subfamily A, member 5##NM_012377|OR7C2|26658|olfactory receptor, family 7, subfamily C, member 2##BC110063|OR7C2|26658|olfactory receptor, family 7, subfamily C, member 2##NM_005071|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##U18244|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##BC028721|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##BC040604|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6	0.058304	
chr2	15888949	15889092	reg1035426.p1	4.340	+	TSC_hg19_v1_chr2_+_15732004 AB593034 AB593033 AB593031 AK297432 AK298426 BC053673 BC012132 AB593032 AK298212 BC012739 AK313933 EF418570 EF418571 AB527788	-156995	+	NM_004939 X70649	-157251	+	TSC_hg19_v1_chr2_-_15701451 BC108693 AF388385 BC131735 NM_015909 AB621813	-187562	-	M55330 TSC_hg19_v1_chr2_+_16080569	191544	+	TSC_hg19_v1_chr2_+_16080676 AK298225 NM_005378 AF320053 AK299495	191668	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	192753	-	AB593034|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593033|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593031|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK297432|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK298426|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC053673|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC012132|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593032|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK298212|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC012739|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK313933|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##EF418570|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##EF418571|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##NM_004939|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##X70649|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC108693|NBAS|51594|neuroblastoma amplified sequence##AF388385|NBAS|51594|neuroblastoma amplified sequence##BC131735|NBAS|51594|neuroblastoma amplified sequence##NM_015909|NBAS|51594|neuroblastoma amplified sequence##AB621813|NBAS|51594|neuroblastoma amplified sequence##M55330|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##AK298225|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##NM_005378|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##AF320053|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##AK299495|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)	0.98838	CTCF.p2:18:0.988
chr2	232585800	232585917	reg1027568.p2	4.340	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	-12526	+	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	-12624	+	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	-128241	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	60067	-	TSC_hg19_v1_chr2_+_232646442 AK307486	60579	+	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	65258	+	BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AK307486|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)	0.0	
chr5	10627729	10627910	reg1008605.p1	4.340	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-63377	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-185667	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-185816	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	133440	-	TSC_hg19_v1_chr5_-_10761341 BC002726	133523	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	133580	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.0	
chr6	82462208	82462357	reg1011737.p1	4.340	+	AY740520 FJ211061 CU674334 CU675631 TSC_hg19_v1_chr6_-_82461975	-361	-	TSC_hg19_v1_chr6_+_80816397 AK289977 BC040139 M55575 AB529112 BT020063 X52446	-1645845	+	TSC_hg19_v1_chr6_+_80816387 AK316545 BC034481	-1645899	+	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	129	-	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	495131	-	TSC_hg19_v1_chr6_-_82957441 NM_015525 DQ005633 DQ005634	495186	-	AY740520|FAM46A|55603|family with sequence similarity 46, member A##AK289977|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC040139|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##M55575|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BT020063|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##X52446|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AK316545|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC034481|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##NM_015525|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005633|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005634|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase	0.0	
chr7	4519161	4519255	reg1035872.p1	4.340	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	-1178209	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	-1435746	-	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-1635400	-	TSC_hg19_v1_chr7_+_4721925 NM_001037165	202630	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	203043	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	296053	+	AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_001037165|FOXK1|221937|forkhead box K1##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415	1.018915	CTCF.p2:16:1.000
chr10	78797218	78797286	reg1031223.p1	4.339	+	AF267860 NM_032024	-1254734	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1635687	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1635771	-	AF118141 TSC_hg19_v1_chr10_-_79397246	599973	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	600084	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	600154	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.335648	CTCF.p2:0:0.336
chr11	62446547	62446654	reg1028235.p2	4.339	+	AK054832 AK300542 AK303471 TSC_hg19_v1_chr11_-_62446546 BC040129 AK297856	-40	-	CU674676 GQ129328 TSC_hg19_v1_chr11_-_62446540 M68864 BC001372 NM_015853 BC000902 BC032689 AK316012	-133	-	TSC_hg19_v1_chr11_-_62439241 AK055736 BC001434 NM_024099	-7364	-	AK291334 TSC_hg19_v1_chr11_-_62457003 AY358354 BC053902 AL834319	10500	-	NM_203422	10770	-	TSC_hg19_v1_chr11_-_62472904 CU678804 CU680238 CU692014	26342	-	AK054832|UBXN1|51035|UBX domain protein 1##AK300542|UBXN1|51035|UBX domain protein 1##AK303471|UBXN1|51035|UBX domain protein 1##BC040129|UBXN1|51035|UBX domain protein 1##AK297856|UBXN1|51035|UBX domain protein 1##GQ129328|UBXN1|51035|UBX domain protein 1##M68864|UBXN1|51035|UBX domain protein 1##BC001372|UBXN1|51035|UBX domain protein 1##NM_015853|UBXN1|51035|UBX domain protein 1##BC000902|UBXN1|51035|UBX domain protein 1##BC032689|UBXN1|51035|UBX domain protein 1##AK316012|UBXN1|51035|UBX domain protein 1##AK055736|C11orf48|79081|chromosome 11 open reading frame 48##BC001434|C11orf48|79081|chromosome 11 open reading frame 48##NM_024099|C11orf48|79081|chromosome 11 open reading frame 48##AK291334|LRRN4CL|221091|LRRN4 C-terminal like##AY358354|LRRN4CL|221091|LRRN4 C-terminal like##BC053902|LRRN4CL|221091|LRRN4 C-terminal like##AL834319|LRRN4CL|221091|LRRN4 C-terminal like##NM_203422|LRRN4CL|221091|LRRN4 C-terminal like	0.0	
chr3	82693257	82693353	reg1029596.p1	4.339	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-658003	+	TSC_hg19_v1_chr3_-_81810971 NM_000158	-882363	-	TSC_hg19_v1_chr3_-_81810866 AB209731 BC012098	-882457	-	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	2314824	+	AF538973 NM_153184	3082326	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	4346946	-	NM_000158|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB209731|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##BC012098|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)	0.849337	CTCF.p2:3:0.796
chr8	126442491	126442589	reg1029137.p1	4.339	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-338443	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-338483	-	TSC_hg19_v1_chr8_-_126104024 AK296970	-338518	-	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	39	+	TSC_hg19_v1_chr8_-_126963395 BX648371	520873	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	1128015	-	NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##AK296970|KIAA0196|9897|KIAA0196##BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B	0.114144	
chr10	50385501	50385681	reg1028409.p2	4.338	+	BC029839 BC047597 NM_001164484	-43533	-	TSC_hg19_v1_chr10_-_50323537 BC041414 AK297931 AK056299 NM_001031746 NM_144984	-62068	-	NM_001006939 BC036722	-263311	-	DQ884399 TSC_hg19_v1_chr10_-_50396437 BC047724 BC104438 BC104439 NM_001010863 BC037922 BC042857 AK303891	10835	-	AK127811 NM_001135196 NM_199459 TSC_hg19_v1_chr10_+_50507214 AL833265	121620	+	NM_001080520	214315	-	BC029839|FAM170B|170370|family with sequence similarity 170, member B##BC047597|FAM170B|170370|family with sequence similarity 170, member B##NM_001164484|FAM170B|170370|family with sequence similarity 170, member B##BC041414|VSTM4|196740|V-set and transmembrane domain containing 4##AK297931|VSTM4|196740|V-set and transmembrane domain containing 4##AK056299|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001031746|VSTM4|196740|V-set and transmembrane domain containing 4##NM_144984|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18##DQ884399|C10orf128|170371|chromosome 10 open reading frame 128##BC047724|C10orf128|170371|chromosome 10 open reading frame 128##BC104438|C10orf128|170371|chromosome 10 open reading frame 128##BC104439|C10orf128|170371|chromosome 10 open reading frame 128##NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128##BC037922|C10orf128|170371|chromosome 10 open reading frame 128##BC042857|C10orf128|170371|chromosome 10 open reading frame 128##AK127811|C10orf71|118461|chromosome 10 open reading frame 71##NM_001135196|C10orf71|118461|chromosome 10 open reading frame 71##NM_199459|C10orf71|118461|chromosome 10 open reading frame 71##AL833265|C10orf71|118461|chromosome 10 open reading frame 71##NM_001080520|DRGX|644168|dorsal root ganglia homeobox	0.0	
chr11	65222729	65222889	reg1027945.p2	4.338	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	-29286	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	-30409	+	TSC_hg19_v1_chr11_+_65190274 AK026198	-32531	+	TSC_hg19_v1_chr11_+_65265158 EF177381	42394	+	TSC_hg19_v1_chr11_+_65266515 BC025986 BX538238 FJ209305	43692	+	TSC_hg19_v1_chr11_+_65266869 BC104662	43990	+	AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##EF177381|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BC025986|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BX538238|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)	0.0	
chr13	111699339	111699459	reg1033240.p2	4.338	+	AK000100 NM_017664 TSC_hg19_v1_chr13_-_111567417	-131983	-	TSC_hg19_v1_chr13_-_111567375 BC001727 AK096083 BC039715	-132034	-	CU674848 CU691752 TSC_hg19_v1_chr13_-_111567293	-132112	-	TSC_hg19_v1_chr13_+_111767658 BC060776 NM_001113511 NM_001113512 NM_145735 BC033905 AL834228 CU687414 CU689800 EU832819 GQ129214	68330	+	AK300157 TSC_hg19_v1_chr13_+_111806035	106637	+	TSC_hg19_v1_chr13_+_111806041 AB177849 NM_003899	106652	+	AK000100|ANKRD10|55608|ankyrin repeat domain 10##NM_017664|ANKRD10|55608|ankyrin repeat domain 10##BC001727|ANKRD10|55608|ankyrin repeat domain 10##AK096083|ANKRD10|55608|ankyrin repeat domain 10##BC039715|ANKRD10|55608|ankyrin repeat domain 10##BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK300157|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AB177849|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_003899|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	0.0	
chr17	45331254	45331386	reg1033430.p1	4.338	+	TSC_hg19_v1_chr17_+_45331260 AK300424	-62	+	AY826979 TSC_hg19_v1_chr17_+_45331224 AB587392 U95204	-96	+	TSC_hg19_v1_chr17_+_45331192 BC127666 BC127667 J02703 NM_000212 M35999 M20311	-136	+	BC044604 TSC_hg19_v1_chr17_+_45401141	69821	+	TSC_hg19_v1_chr17_+_45401357 NM_001195192 NM_152347 BC036407 BC037876	70012	+	TSC_hg19_v1_chr17_-_45569837 BC090855 BC067758	238524	-	AY826979|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##U95204|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127666|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127667|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##J02703|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##NM_000212|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M35999|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M20311|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC044604|C17orf57|124989|chromosome 17 open reading frame 57##NM_001195192|C17orf57|124989|chromosome 17 open reading frame 57##NM_152347|C17orf57|124989|chromosome 17 open reading frame 57##BC036407|C17orf57|124989|chromosome 17 open reading frame 57##BC037876|C17orf57|124989|chromosome 17 open reading frame 57##BC090855|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2##BC067758|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2	0.0	
chr17	5487613	5487793	reg1030896.p1	4.338	+	AF217966 AF131825 NM_001162371 TSC_hg19_v1_chr17_-_5404327	-83387	-	AK289939 AL136906 NM_024039	-97474	+	TSC_hg19_v1_chr17_+_5389888 BC000229	-97787	+	AF298548 TSC_hg19_v1_chr17_-_5487785 AF310105 AB023143 BC028066 BC051787 AK310936 NM_001033053 NM_014922 NM_033004 NM_033006 NM_033007	96	-	AK309645 TSC_hg19_v1_chr17_+_5972435 AK289603	484727	+	TSC_hg19_v1_chr17_+_5973700 AL833730 NM_015253	486104	+	AF217966|LOC728392|728392|uncharacterized LOC728392##AF131825|LOC728392|728392|uncharacterized LOC728392##NM_001162371|LOC728392|728392|uncharacterized LOC728392##AK289939|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AL136906|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##NM_024039|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##BC000229|MIS12|79003|MIS12, MIND kinetochore complex component, homolog (S. pombe)##AF298548|NLRP1|22861|NLR family, pyrin domain containing 1##AF310105|NLRP1|22861|NLR family, pyrin domain containing 1##AB023143|NLRP1|22861|NLR family, pyrin domain containing 1##AK310936|NLRP1|22861|NLR family, pyrin domain containing 1##NM_001033053|NLRP1|22861|NLR family, pyrin domain containing 1##NM_014922|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033004|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033006|NLRP1|22861|NLR family, pyrin domain containing 1##NM_033007|NLRP1|22861|NLR family, pyrin domain containing 1##AK309645|WSCD1|23302|WSC domain containing 1##AK289603|WSCD1|23302|WSC domain containing 1##AL833730|WSCD1|23302|WSC domain containing 1##NM_015253|WSCD1|23302|WSC domain containing 1	0.121199	
chr17	71948973	71949133	reg1034603.p1	4.338	+	NM_001144952	-308827	-	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-640913	-	BC157870 NM_001129885	-691035	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	250762	+	TSC_hg19_v1_chr17_+_72199849 BC000603	250800	+	TSC_hg19_v1_chr17_+_72209709 NM_032646 BC107492 BC107602 AK315163 AF319952 BC005168	260616	+	NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38##NM_032646|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107492|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107602|TTYH2|94015|tweety homolog 2 (Drosophila)##AK315163|TTYH2|94015|tweety homolog 2 (Drosophila)##AF319952|TTYH2|94015|tweety homolog 2 (Drosophila)##BC005168|TTYH2|94015|tweety homolog 2 (Drosophila)	0.89741	CTCF.p2:6:0.897
chr18	19192131	19192247	reg1031070.p1	4.338	+	TSC_hg19_v1_chr18_-_19180830 AL832041	-11313	-	TSC_hg19_v1_chr18_-_19180666 NM_052911 AK096746	-11511	-	TSC_hg19_v1_chr18_-_19180616 AB067498	-11570	-	TSC_hg19_v1_chr18_+_19192269 J03798 NM_006938 BC001721	62	+	TSC_hg19_v1_chr18_+_19192302 AJ577268 BC072427	127	+	CU676866 AK024880 TSC_hg19_v1_chr18_-_19284733 AF007152 BC021196 AK298728	92490	-	AL832041|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##NM_052911|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##AK096746|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##AB067498|ESCO1|114799|establishment of cohesion 1 homolog 1 (S. cerevisiae)##J03798|SNRPD1|6632|small nuclear ribonucleoprotein D1 polypeptide 16kDa##NM_006938|SNRPD1|6632|small nuclear ribonucleoprotein D1 polypeptide 16kDa##BC001721|SNRPD1|6632|small nuclear ribonucleoprotein D1 polypeptide 16kDa##AJ577268|SNRPD1|6632|small nuclear ribonucleoprotein D1 polypeptide 16kDa##BC072427|SNRPD1|6632|small nuclear ribonucleoprotein D1 polypeptide 16kDa##AK024880|ABHD3|171586|abhydrolase domain containing 3##AF007152|ABHD3|171586|abhydrolase domain containing 3##BC021196|ABHD3|171586|abhydrolase domain containing 3##AK298728|ABHD3|171586|abhydrolase domain containing 3	0.210706	CTCF.p2:-6:0.211
chr19	41260892	41261032	reg1034089.p2	4.338	+	TSC_hg19_v1_chr19_+_41257100 AK293140 AK313182 X06347 BC008290 AB464219 CU674198	-3763	+	NM_004596 TSC_hg19_v1_chr19_+_41256782 BC000405	-4186	+	TSC_hg19_v1_chr19_-_41256396 BC090894 AK123126	-4560	-	NM_001202553	20119	+	NM_006533 X75450 BC005910 BT007044 CR541648	20402	+	TSC_hg19_v1_chr19_+_41284141 NM_016154	23142	+	AK293140|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A##AK313182|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A##X06347|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A##BC008290|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A##NM_004596|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A##BC000405|SNRPA|6626|small nuclear ribonucleoprotein polypeptide A##BC090894|C19orf54|284325|chromosome 19 open reading frame 54##AK123126|C19orf54|284325|chromosome 19 open reading frame 54##NM_001202553|MIA|8190|melanoma inhibitory activity##NM_006533|MIA|8190|melanoma inhibitory activity##X75450|MIA|8190|melanoma inhibitory activity##BC005910|MIA|8190|melanoma inhibitory activity##BT007044|MIA|8190|melanoma inhibitory activity##CR541648|MIA|8190|melanoma inhibitory activity##NM_016154|RAB4B|53916|RAB4B, member RAS oncogene family	0.0	
chr2	238380245	238380340	reg1032467.p1	4.338	+	TSC_hg19_v1_chr2_-_238322840 NM_004369 NM_057164 NM_057165 NM_057166 NM_057167	-57448	-	TSC_hg19_v1_chr2_-_238322815 X52022	-57471	-	AK303290 TSC_hg19_v1_chr2_-_238322814	-57478	-	TSC_hg19_v1_chr2_+_238395893 NM_001042467 NM_024101 AK296745 AK022207 AK292929 AK310821 AK225381 BC001653 BC051269	15604	+	AB015419 BC069081 BC069284 NM_015893	94924	+	TSC_hg19_v1_chr2_-_238499327 BC009827 BC050426 AL136645	119054	-	NM_004369|COL6A3|1293|collagen, type VI, alpha 3##NM_057164|COL6A3|1293|collagen, type VI, alpha 3##NM_057165|COL6A3|1293|collagen, type VI, alpha 3##NM_057166|COL6A3|1293|collagen, type VI, alpha 3##NM_057167|COL6A3|1293|collagen, type VI, alpha 3##X52022|COL6A3|1293|collagen, type VI, alpha 3##AK303290|COL6A3|1293|collagen, type VI, alpha 3##NM_001042467|MLPH|79083|melanophilin##NM_024101|MLPH|79083|melanophilin##AK296745|MLPH|79083|melanophilin##AK022207|MLPH|79083|melanophilin##AK292929|MLPH|79083|melanophilin##AK310821|MLPH|79083|melanophilin##AK225381|MLPH|79083|melanophilin##BC001653|MLPH|79083|melanophilin##BC051269|MLPH|79083|melanophilin##AB015419|PRLH|51052|prolactin releasing hormone##BC069081|PRLH|51052|prolactin releasing hormone##BC069284|PRLH|51052|prolactin releasing hormone##NM_015893|PRLH|51052|prolactin releasing hormone##BC009827|RAB17|64284|RAB17, member RAS oncogene family##BC050426|RAB17|64284|RAB17, member RAS oncogene family##AL136645|RAB17|64284|RAB17, member RAS oncogene family	0.959833	CTCF.p2:0:0.960
chr2	75209813	75209962	reg1038153.p1	4.338	+	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-24102	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-147636	-	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	-148627	+	AK289765 NM_001058 NM_015727	216741	-	BC016157 TSC_hg19_v1_chr2_-_75788066	578160	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	578203	-	NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2##AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A	0.022254	
chr8	67445786	67445934	reg1034718.p1	4.338	+	NM_152765	-40370	+	NM_144650 AY033237 AK056992 AK300881 BC047492 BC064634 AK293530 AK300243 AK294114 BC110290	-101128	+	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	-104554	+	BC032233 NM_001080416 NM_001144755 TSC_hg19_v1_chr8_-_67525502	79614	-	AM392649 AM393766 TSC_hg19_v1_chr8_-_67579266	133371	-	TSC_hg19_v1_chr8_-_67579368 BC118917 AL832606	133506	-	NM_152765|C8orf46|254778|chromosome 8 open reading frame 46##NM_144650|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AY033237|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK056992|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300881|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC047492|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC064634|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK293530|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300243|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK294114|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC110290|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC032233|LOC645895|645895|uncharacterized LOC645895##NM_001080416|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1##NM_001144755|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1##AM392649|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##AM393766|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##BC118917|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##AL832606|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1	0.0	
chr11	64781681	64781862	reg1009408.p3	4.337	+	NM_001199745 NM_001667 AK223502 TSC_hg19_v1_chr11_+_64781642 BC002530 AK096447 L13687 EU832671 EU832750 AB527923 AK294580 AF493888 BT006674	-140	+	AB463431 AK096702 HM134154 NM_138456	-17319	-	BC106951 BC106952 NM_001037225	-54163	-	NM_013306 NM_147777 TSC_hg19_v1_chr11_+_64794948 BC012767 BC014520 AK315642 AK315034 AF001435 BC009897 AF175267 AB527759 CU679523 AF175268 BT006631 AB209439	13174	+	NM_013299 TSC_hg19_v1_chr11_+_64808377	26610	+	TSC_hg19_v1_chr11_+_64808404 BC007448 U79266	26647	+	NM_001199745|ARL2|402|ADP-ribosylation factor-like 2##NM_001667|ARL2|402|ADP-ribosylation factor-like 2##AK223502|ARL2|402|ADP-ribosylation factor-like 2##BC002530|ARL2|402|ADP-ribosylation factor-like 2##AK096447|ARL2-SNX15|100528018|ARL2-SNX15 readthrough##L13687|ARL2|402|ADP-ribosylation factor-like 2##EU832671|ARL2|402|ADP-ribosylation factor-like 2##EU832750|ARL2|402|ADP-ribosylation factor-like 2##AK294580|ARL2|402|ADP-ribosylation factor-like 2##AF493888|ARL2|402|ADP-ribosylation factor-like 2##BT006674|ARL2|402|ADP-ribosylation factor-like 2##AK096702|BATF2|116071|basic leucine zipper transcription factor, ATF-like 2##HM134154|BATF2|116071|basic leucine zipper transcription factor, ATF-like 2##NM_138456|BATF2|116071|basic leucine zipper transcription factor, ATF-like 2##BC106951|C11orf85|283129|chromosome 11 open reading frame 85##BC106952|C11orf85|283129|chromosome 11 open reading frame 85##NM_001037225|C11orf85|283129|chromosome 11 open reading frame 85##NM_013306|SNX15|29907|sorting nexin 15##NM_147777|SNX15|29907|sorting nexin 15##BC012767|SNX15|29907|sorting nexin 15##BC014520|SNX15|29907|sorting nexin 15##AK315642|SNX15|29907|sorting nexin 15##AK315034|SNX15|29907|sorting nexin 15##AF001435|SNX15|29907|sorting nexin 15##BC009897|SNX15|29907|sorting nexin 15##AF175267|SNX15|29907|sorting nexin 15##AF175268|SNX15|29907|sorting nexin 15##BT006631|SNX15|29907|sorting nexin 15##AB209439|SNX15|29907|sorting nexin 15##NM_013299|SAC3D1|29901|SAC3 domain containing 1##BC007448|SAC3D1|29901|SAC3 domain containing 1##U79266|SAC3D1|29901|SAC3 domain containing 1	0.608547	CTCF.p2:42:0.371	CTCF.p2:-107:0.238
chr14	55249577	55249731	reg1032272.p1	4.337	+	NM_001161577 BC021726	-28127	+	TSC_hg19_v1_chr14_+_55168831 AB028976	-80765	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	-215018	+	AY137463 AY137464 AY137465 Z16418 S44049 CR536551 DQ892998 DQ896245 S43856 S44053 TSC_hg19_v1_chr14_-_55369545 Z29433 Z29434 U66095 BC025415 U19523 U66097 NM_000161 NM_001024024 NM_001024070 NM_001024071	119760	-	TSC_hg19_v1_chr14_-_55493780 BC000622 BC005040 AK293005 BC063041	244131	-	TSC_hg19_v1_chr14_-_55493818 BC043349 NM_001008396 NM_007086	244157	-	NM_001161577|SAMD4A|23034|sterile alpha motif domain containing 4A##BC021726|SAMD4A|23034|sterile alpha motif domain containing 4A##AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A##AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##AY137463|GCH1|2643|GTP cyclohydrolase 1##AY137464|GCH1|2643|GTP cyclohydrolase 1##AY137465|GCH1|2643|GTP cyclohydrolase 1##Z16418|GCH1|2643|GTP cyclohydrolase 1##S44049|GCH1|2643|GTP cyclohydrolase 1##CR536551|GCH1|2643|GTP cyclohydrolase 1##DQ892998|GCH1|2643|GTP cyclohydrolase 1##DQ896245|GCH1|2643|GTP cyclohydrolase 1##S43856|GCH1|2643|GTP cyclohydrolase 1##S44053|GCH1|2643|GTP cyclohydrolase 1##Z29433|GCH1|2643|GTP cyclohydrolase 1##Z29434|GCH1|2643|GTP cyclohydrolase 1##U66095|GCH1|2643|GTP cyclohydrolase 1##BC025415|GCH1|2643|GTP cyclohydrolase 1##U19523|GCH1|2643|GTP cyclohydrolase 1##U66097|GCH1|2643|GTP cyclohydrolase 1##NM_000161|GCH1|2643|GTP cyclohydrolase 1##NM_001024024|GCH1|2643|GTP cyclohydrolase 1##NM_001024070|GCH1|2643|GTP cyclohydrolase 1##NM_001024071|GCH1|2643|GTP cyclohydrolase 1##BC000622|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC005040|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##AK293005|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC063041|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC043349|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_001008396|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_007086|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1	0.225064	CTCF.p2:5:0.225
chr18	13569144	13569274	reg1024247.p1	4.337	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-350424	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-577864	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-621145	+	NM_001003674 NM_001003675	42455	+	AF009426 AF009427 NM_004338 NM_181483	51657	+	TSC_hg19_v1_chr18_-_13726549 AK055618	157297	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.0	
chr21	45663848	45664029	reg1016390.p1	4.337	+	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	-3081	-	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	-3172	-	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-110377	+	AF194032 NM_013369 NM_175867	18160	-	BC142608 AK309572 AB006682 NM_000383 Z97990	41806	+	AB006683 AB006685 BC137268 BC137270 NM_000658	46272	+	AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##BC142608|AIRE|326|autoimmune regulator##AK309572|AIRE|326|autoimmune regulator##AB006682|AIRE|326|autoimmune regulator##NM_000383|AIRE|326|autoimmune regulator##Z97990|AIRE|326|autoimmune regulator##AB006683|AIRE|326|autoimmune regulator##AB006685|AIRE|326|autoimmune regulator##BC137268|AIRE|326|autoimmune regulator##BC137270|AIRE|326|autoimmune regulator##NM_000658|AIRE|326|autoimmune regulator	0.0	
chr2	159317276	159317439	reg1030917.p2	4.337	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-3774	+	TSC_hg19_v1_chr2_+_159313419 BC034473	-3922	+	CU677295 BC105928 BC107596 BC107597 AK123220 AK058105 AF458588 BC015395 AK309246 TSC_hg19_v1_chr2_-_159313250 AK308783 AK311042 NM_001171637 NM_138803	-4248	-	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	334478	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	507790	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	825791	-	NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##BC034473|PKP4|8502|plakophilin 4##BC105928|CCDC148|130940|coiled-coil domain containing 148##BC107596|CCDC148|130940|coiled-coil domain containing 148##BC107597|CCDC148|130940|coiled-coil domain containing 148##AK123220|CCDC148|130940|coiled-coil domain containing 148##AK058105|CCDC148|130940|coiled-coil domain containing 148##AF458588|CCDC148|130940|coiled-coil domain containing 148##BC015395|CCDC148|130940|coiled-coil domain containing 148##AK309246|CCDC148|130940|coiled-coil domain containing 148##AK308783|CCDC148|130940|coiled-coil domain containing 148##AK311042|CCDC148|130940|coiled-coil domain containing 148##NM_001171637|CCDC148|130940|coiled-coil domain containing 148##NM_138803|CCDC148|130940|coiled-coil domain containing 148##AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1	0.038106	
chr3	194838731	194838840	reg1032253.p1	4.337	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-431282	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-432162	+	NM_018385	-445580	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	153065	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	324917	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	431328	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.112952	
chr6	41513521	41513701	reg1027714.p1	4.337	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-210045	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-259187	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-317543	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	548	+	TSC_hg19_v1_chr6_+_41514342 BC052803	726	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	92611	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	0.0	
chr8	145002583	145002688	reg1019349.p1	4.337	+	AB051895 NM_031308	-55202	-	TSC_hg19_v1_chr8_-_144923180 BC071605 AK293943 NM_178564	-79476	-	TSC_hg19_v1_chr8_-_144911540 AF114818 AK292373 NM_014281 NM_078480	-91085	-	AF330791 TSC_hg19_v1_chr8_-_145013766 AY480051 NM_201384	11068	-	AY480050 NM_201383 TSC_hg19_v1_chr8_-_145016793	14126	-	AF330792 AY480049 TSC_hg19_v1_chr8_-_145018117 NM_201382	15469	-	AB051895|EPPK1|83481|epiplakin 1##NM_031308|EPPK1|83481|epiplakin 1##BC071605|NRBP2|340371|nuclear receptor binding protein 2##AK293943|NRBP2|340371|nuclear receptor binding protein 2##NM_178564|NRBP2|340371|nuclear receptor binding protein 2##AF114818|PUF60|22827|poly-U binding splicing factor 60KDa##AK292373|PUF60|22827|poly-U binding splicing factor 60KDa##NM_014281|PUF60|22827|poly-U binding splicing factor 60KDa##NM_078480|PUF60|22827|poly-U binding splicing factor 60KDa##AY480051|PLEC|5339|plectin##NM_201384|PLEC|5339|plectin##AY480050|PLEC|5339|plectin##NM_201383|PLEC|5339|plectin##AF330792|PLEC|5339|plectin##AY480049|PLEC|5339|plectin##NM_201382|PLEC|5339|plectin	0.0	
chr19	9958883	9958999	reg1031257.p2	4.336	+	BC031971 TSC_hg19_v1_chr19_+_9946188	-12777	+	NM_006221 TSC_hg19_v1_chr19_+_9946010 AK097558 AK291074 BC002899 U49070 AF086512 AB385559 BT019331 CR407654 CU678280 DQ892978 DQ896226	-12990	+	TSC_hg19_v1_chr19_+_9938597 AK309258 AF313915 BC007053 BC110839	-20328	+	TSC_hg19_v1_chr19_-_10047187 CU679906 DQ891083 DQ894265 AF131839 BC011361 NM_058164	88183	-	TSC_hg19_v1_chr19_-_10121181 AF177941 NM_015719	162202	-	DQ426888 AF229845 NM_015725	164951	+	BC031971|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##NM_006221|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK097558|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK291074|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##BC002899|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##U49070|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AF086512|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##BT019331|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##CR407654|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##DQ892978|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##DQ896226|PIN1|5300|peptidylprolyl cis/trans isomerase, NIMA-interacting 1##AK309258|UBL5|59286|ubiquitin-like 5##AF313915|UBL5|59286|ubiquitin-like 5##BC007053|UBL5|59286|ubiquitin-like 5##BC110839|UBL5|59286|ubiquitin-like 5##DQ891083|OLFM2|93145|olfactomedin 2##DQ894265|OLFM2|93145|olfactomedin 2##AF131839|OLFM2|93145|olfactomedin 2##BC011361|OLFM2|93145|olfactomedin 2##NM_058164|OLFM2|93145|olfactomedin 2##AF177941|COL5A3|50509|collagen, type V, alpha 3##NM_015719|COL5A3|50509|collagen, type V, alpha 3##AF229845|RDH8|50700|retinol dehydrogenase 8 (all-trans)##NM_015725|RDH8|50700|retinol dehydrogenase 8 (all-trans)	0.999095	CTCF.p2:-7:0.999
chr6	19812877	19813024	reg1029542.p1	4.336	+	AK096832 NM_182757 AB076367 BC063311 AL832329	-1425283	+	X64229 TSC_hg19_v1_chr6_-_18264759 BC012442 AK312616 AK298089 AK294079 BC035259 AK297749 NM_001134709 NM_003472	-1548229	-	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	-1657295	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	24685	+	TSC_hg19_v1_chr6_+_19838612 AF085889	25733	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	399722	-	AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##X64229|DEK|7913|DEK oncogene##BC012442|DEK|7913|DEK oncogene##AK312616|DEK|7913|DEK oncogene##AK298089|DEK|7913|DEK oncogene##AK294079|DEK|7913|DEK oncogene##BC035259|DEK|7913|DEK oncogene##AK297749|DEK|7913|DEK oncogene##NM_001134709|DEK|7913|DEK oncogene##NM_003472|DEK|7913|DEK oncogene##BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1	0.941295	CTCF.p2:-9:0.941
chr7	102105421	102105565	reg1029362.p2	4.336	+	TSC_hg19_v1_chr7_+_102105459 AB209379 CU688900	-1	+	TSC_hg19_v1_chr7_+_102105430 AL133057 BC030547 NM_152892 AK290967 AK313771	-85	+	AK000020 TSC_hg19_v1_chr7_-_102105307 AK026097 AK222689 NM_017621	-176	-	DQ893151 DQ896446 TSC_hg19_v1_chr7_-_102119367 X98433 BC040116 BC024165 BC141830 BC139902 BC065711 L37127 X82385 AK290515 NM_006234	13850	-	AK302217 NM_001031618 NM_001166339	86185	+	AJ277739 AJ277740 AJ277741 AB384935 BC056864 BC071870 TSC_hg19_v1_chr7_-_102212997 BC044209 BC050598	107494	-	AB209379|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AL133057|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##BC030547|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##NM_152892|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK290967|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK313771|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK000020|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK026097|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK222689|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##NM_017621|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##DQ893151|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##DQ896446|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X98433|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC040116|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC024165|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC141830|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC139902|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC065711|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##L37127|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X82385|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AK290515|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##NM_006234|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##AJ277739|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AJ277740|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277741|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2	0.036681	
chr19	19673976	19674088	reg1032155.p2	4.335	+	TSC_hg19_v1_chr19_+_19649101 AK314213 AF542080	-24926	+	AK127735 BC068256 NM_153221 TSC_hg19_v1_chr19_+_19649088	-24960	+	NM_001190328 NM_198537 TSC_hg19_v1_chr19_+_19639680 AK126916 BC020948 AB464360 DQ778079 DQ778080	-34327	+	BC033067 BC143092 AK097427 AK301631 BC143588 BC143589 TSC_hg19_v1_chr19_-_19729548 BC141859 NM_025245	55549	-	AF011466 AK316573 BC025695 AF197929 TSC_hg19_v1_chr19_-_19739025 NM_004720	64975	-	BC126436 BC144142 TSC_hg19_v1_chr19_-_19754416 BC032057 AK297220 AF132541	80361	-	AK314213|CILP2|148113|cartilage intermediate layer protein 2##AF542080|CILP2|148113|cartilage intermediate layer protein 2##AK127735|CILP2|148113|cartilage intermediate layer protein 2##BC068256|CILP2|148113|cartilage intermediate layer protein 2##NM_153221|CILP2|148113|cartilage intermediate layer protein 2##NM_001190328|YJEFN3|374887|YjeF N-terminal domain containing 3##NM_198537|YJEFN3|374887|YjeF N-terminal domain containing 3##AK126916|YJEFN3|374887|YjeF N-terminal domain containing 3##BC020948|YJEFN3|374887|YjeF N-terminal domain containing 3##DQ778079|YJEFN3|374887|YjeF N-terminal domain containing 3##DQ778080|YJEFN3|374887|YjeF N-terminal domain containing 3##BC033067|PBX4|80714|pre-B-cell leukemia homeobox 4##BC143092|PBX4|80714|pre-B-cell leukemia homeobox 4##AK097427|PBX4|80714|pre-B-cell leukemia homeobox 4##AK301631|PBX4|80714|pre-B-cell leukemia homeobox 4##BC143588|PBX4|80714|pre-B-cell leukemia homeobox 4##BC143589|PBX4|80714|pre-B-cell leukemia homeobox 4##BC141859|PBX4|80714|pre-B-cell leukemia homeobox 4##NM_025245|PBX4|80714|pre-B-cell leukemia homeobox 4##AF011466|LPAR2|9170|lysophosphatidic acid receptor 2##AK316573|LPAR2|9170|lysophosphatidic acid receptor 2##BC025695|LPAR2|9170|lysophosphatidic acid receptor 2##AF197929|LPAR2|9170|lysophosphatidic acid receptor 2##NM_004720|LPAR2|9170|lysophosphatidic acid receptor 2##BC126436|GMIP|51291|GEM interacting protein##BC144142|GMIP|51291|GEM interacting protein##BC032057|GMIP|51291|GEM interacting protein##AK297220|GMIP|51291|GEM interacting protein##AF132541|GMIP|51291|GEM interacting protein	0.07151	
chr8	142188973	142189078	reg1032941.p2	4.335	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-50288	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-177769	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-543401	-	AK128212 NM_001080431	49647	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	75165	-	NM_005293	188339	-	NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.0	
chr8	42150781	42150961	reg1032479.p2	4.335	+	BC090865 TSC_hg19_v1_chr8_+_42128868 AF080158 AK298241 AB209090 BC108694 AK290952 BC144080 BX648165	-21956	+	TSC_hg19_v1_chr8_+_42128835 AK302723 AK303294 AK316418 BC006231 AK091297 AK309052	-22036	+	TSC_hg19_v1_chr8_+_42128832 AK303528	-22044	+	NM_002690 AK223537 TSC_hg19_v1_chr8_+_42196014 BC100288 AK294025 AK314976 D29013 M13140 BC106909 AB464039 CR536503 CR541802 L11607	45186	+	AB017788 BC107046 BC107047 AF177397 NM_014420 AK311714 AK301609	83781	-	NM_001135694 NM_005662 TSC_hg19_v1_chr8_+_42249355	98447	+	BC090865|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AF080158|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK298241|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AB209090|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC108694|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK290952|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC144080|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BX648165|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK302723|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK303294|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK316418|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC006231|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK091297|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK303528|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_002690|POLB|5423|polymerase (DNA directed), beta##AK223537|POLB|5423|polymerase (DNA directed), beta##BC100288|POLB|5423|polymerase (DNA directed), beta##AK294025|POLB|5423|polymerase (DNA directed), beta##AK314976|POLB|5423|polymerase (DNA directed), beta##D29013|POLB|5423|polymerase (DNA directed), beta##M13140|POLB|5423|polymerase (DNA directed), beta##BC106909|POLB|5423|polymerase (DNA directed), beta##CR536503|POLB|5423|polymerase (DNA directed), beta##CR541802|POLB|5423|polymerase (DNA directed), beta##L11607|POLB|5423|polymerase (DNA directed), beta##AB017788|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##BC107046|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##BC107047|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##AF177397|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##NM_014420|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##AK301609|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##NM_001135694|VDAC3|7419|voltage-dependent anion channel 3##NM_005662|VDAC3|7419|voltage-dependent anion channel 3	0.0	
chr20	10200297	10200408	reg1032937.p1	4.334	+	TSC_hg19_v1_chr20_-_10200139 AK124961	-209	-	TSC_hg19_v1_chr20_+_10199575 NM_003081 NM_130811 AK094560 AK098347 D21267 AK223617 AK314359 AK289647 BC010647 BX647443 AK098767 L19760 L19761	-825	+	NM_022096 NM_198798 AK097689 TSC_hg19_v1_chr20_+_10015744 BC022878 BC028189 BC011591	-184620	+	AF221993 NM_018848	212217	-	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	214487	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	215624	+	AK124961|LOC100131208|100131208|uncharacterized LOC100131208##NM_003081|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_130811|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK094560|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098347|SNAP25|6616|synaptosomal-associated protein, 25kDa##D21267|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK223617|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK314359|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK289647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BC010647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BX647443|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098767|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19760|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19761|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_022096|ANKRD5|63926|ankyrin repeat domain 5##NM_198798|ANKRD5|63926|ankyrin repeat domain 5##AK097689|ANKRD5|63926|ankyrin repeat domain 5##BC022878|ANKRD5|63926|ankyrin repeat domain 5##BC028189|ANKRD5|63926|ankyrin repeat domain 5##BC011591|ANKRD5|63926|ankyrin repeat domain 5##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94	0.0	
chr2	239034382	239034491	reg1028151.p1	4.334	+	NM_194312 AK124559	-25449	+	TSC_hg19_v1_chr2_+_238969747 BC000586 AK293283	-64669	+	TSC_hg19_v1_chr2_+_238969669 AK301009 BC007891 AF175767 AK298409 DQ893234 DQ896564 CU675851	-64756	+	NM_198582	12926	+	CR533533 FJ491380 FJ491381 CU675457 AB590373 DQ892800 DQ896047 EU832279 EU832364 TSC_hg19_v1_chr2_-_239112267 AL136850 BC035746 AY024365	77803	-	TSC_hg19_v1_chr2_-_239112326 BC006576 HQ658059 HQ658060 NM_030768	77886	-	NM_194312|ESPNL|339768|espin-like##AK124559|ESPNL|339768|espin-like##BC000586|SCLY|51540|selenocysteine lyase##AK293283|SCLY|51540|selenocysteine lyase##AK301009|SCLY|51540|selenocysteine lyase##BC007891|SCLY|51540|selenocysteine lyase##AF175767|SCLY|51540|selenocysteine lyase##AK298409|SCLY|51540|selenocysteine lyase##DQ893234|SCLY|51540|selenocysteine lyase##DQ896564|SCLY|51540|selenocysteine lyase##NM_198582|KLHL30|377007|kelch-like 30 (Drosophila)##CR533533|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##FJ491380|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##FJ491381|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##DQ892800|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##DQ896047|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##EU832279|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##EU832364|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##AL136850|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##BC035746|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##AY024365|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##BC006576|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##HQ658059|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##HQ658060|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##NM_030768|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase	0.0	
chrX	130962072	130962221	reg1031838.p2	4.334	+	BC137050 AB529233 NM_001004486	-284148	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-538734	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-538884	-	TSC_hg19_v1_chrX_-_130964633 AK097911	2505	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	195175	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	195494	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.566111	CTCF.p2:-45:0.566
chrX	153237514	153237647	reg1029861.p1	4.334	+	TSC_hg19_v1_chrX_-_153236650 L20010 BC063435 NM_005334	-861	-	BC010606 TSC_hg19_v1_chrX_-_153218266	-19368	-	D10232 AB527578 BC015558 TSC_hg19_v1_chrX_-_153210096 AK298125 NM_002910	-27436	-	NM_003492	410	+	AF346607 DQ054788 AM392624 AM393211 EU831427 EU831520 AB463802 TSC_hg19_v1_chrX_-_153285300 BC014963	47715	-	TSC_hg19_v1_chrX_-_153285340 BC054000 L76191 NM_001025242 NM_001025243 NM_001569	47757	-	L20010|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##BC063435|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##NM_005334|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##BC010606|HCFC1|3054|host cell factor C1 (VP16-accessory protein)##D10232|RENBP|5973|renin binding protein##BC015558|RENBP|5973|renin binding protein##AK298125|RENBP|5973|renin binding protein##NM_002910|RENBP|5973|renin binding protein##NM_003492|TMEM187|8269|transmembrane protein 187##AF346607|IRAK1|3654|interleukin-1 receptor-associated kinase 1##DQ054788|IRAK1|3654|interleukin-1 receptor-associated kinase 1##AM392624|IRAK1|3654|interleukin-1 receptor-associated kinase 1##AM393211|IRAK1|3654|interleukin-1 receptor-associated kinase 1##EU831427|IRAK1|3654|interleukin-1 receptor-associated kinase 1##EU831520|IRAK1|3654|interleukin-1 receptor-associated kinase 1##BC014963|IRAK1|3654|interleukin-1 receptor-associated kinase 1##BC054000|IRAK1|3654|interleukin-1 receptor-associated kinase 1##L76191|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_001025242|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_001025243|IRAK1|3654|interleukin-1 receptor-associated kinase 1##NM_001569|IRAK1|3654|interleukin-1 receptor-associated kinase 1	0.0	
chr17	17108721	17108847	reg1030196.p1	4.333	+	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	-162820	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	-233380	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-515180	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	829	-	TSC_hg19_v1_chr17_-_17109636 BC031263 AK295282 NM_178836	873	-	TSC_hg19_v1_chr17_-_17140464 AF517523 BC015687	31661	-	NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK090899|PLD6|201164|phospholipase D family, member 6##BC031263|PLD6|201164|phospholipase D family, member 6##AK295282|PLD6|201164|phospholipase D family, member 6##NM_178836|PLD6|201164|phospholipase D family, member 6##AF517523|FLCN|201163|folliculin##BC015687|FLCN|201163|folliculin	0.094164	
chr20	37064019	37064145	reg1033386.p1	4.333	+	TSC_hg19_v1_chr20_-_37063964 BC012894 BC052370 BC032119 BX640887	-110	-	TSC_hg19_v1_chr20_+_36974884 AK313625 BC022256 NM_004139 AY344471 AF105067 AB590524 CU692512 DQ891394 DQ894434 M35533	-89211	+	NM_001725 BC040955 TSC_hg19_v1_chr20_+_36932591 AK315328 AX713278 AX746123 AX752831 J04739 AK296568 BC032230 CU691936 DQ414688 AF322588	-131494	+	TSC_hg19_v1_chr20_+_37075314 AK055434 AK290212 AF454939 AF497716 BC021083 BC040237	11245	+	TSC_hg19_v1_chr20_+_37101489 AB033045 BC047482 NM_020336 AK304242 CR936800	37426	+	BC029594 NM_001018082 BC119704 BC119705	145758	+	BC012894|LOC388796|388796|uncharacterized LOC388796##BC052370|LOC388796|388796|uncharacterized LOC388796##BC032119|LOC388796|388796|uncharacterized LOC388796##BX640887|LOC388796|388796|uncharacterized LOC388796##AK313625|LBP|3929|lipopolysaccharide binding protein##BC022256|LBP|3929|lipopolysaccharide binding protein##NM_004139|LBP|3929|lipopolysaccharide binding protein##AY344471|LBP|3929|lipopolysaccharide binding protein##AF105067|LBP|3929|lipopolysaccharide binding protein##DQ891394|LBP|3929|lipopolysaccharide binding protein##DQ894434|LBP|3929|lipopolysaccharide binding protein##M35533|LBP|3929|lipopolysaccharide binding protein##NM_001725|BPI|671|bactericidal/permeability-increasing protein##BC040955|BPI|671|bactericidal/permeability-increasing protein##AK315328|BPI|671|bactericidal/permeability-increasing protein##AX713278|BPI|671|bactericidal/permeability-increasing protein##AX746123|BPI|671|bactericidal/permeability-increasing protein##AX752831|BPI|671|bactericidal/permeability-increasing protein##J04739|BPI|671|bactericidal/permeability-increasing protein##AK296568|BPI|671|bactericidal/permeability-increasing protein##BC032230|BPI|671|bactericidal/permeability-increasing protein##DQ414688|BPI|671|bactericidal/permeability-increasing protein##AF322588|BPI|671|bactericidal/permeability-increasing protein##AK055434|SNHG11|128439|small nucleolar RNA host gene 11 (non-protein coding)##BC040237|SNHG11|128439|small nucleolar RNA host gene 11 (non-protein coding)##AB033045|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##BC047482|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##NM_020336|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##AK304242|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##CR936800|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##BC029594|ADIG|149685|adipogenin##NM_001018082|ADIG|149685|adipogenin##BC119704|ADIG|149685|adipogenin##BC119705|ADIG|149685|adipogenin	0.049748	
chr2	43683544	43683699	reg1038119.p1	4.333	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-229879	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-229891	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-230276	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	139527	-	TSC_hg19_v1_chr2_+_43864411 BC063310	180792	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	180818	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.0	
chr2	75692819	75692939	reg1030835.p1	4.333	+	AK289765 NM_001058 NM_015727	-266251	-	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-507094	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-630628	-	BC016157 TSC_hg19_v1_chr2_-_75788066	95168	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	95211	-	AK023453 NM_032181	103968	-	AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A	0.666145	CTCF.p2:15:0.666
chr5	171577968	171578148	reg1029001.p2	4.333	+	BC026213 NM_012300 NM_033644 NM_033645	-144182	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	-144414	-	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	-144530	-	AB015718 TSC_hg19_v1_chr5_-_171615170	37080	-	AK307943 TSC_hg19_v1_chr5_-_171615203	37145	-	TSC_hg19_v1_chr5_-_171615241 BC070077 AK313350	37215	-	BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB015718|STK10|6793|serine/threonine kinase 10##AK307943|STK10|6793|serine/threonine kinase 10##BC070077|STK10|6793|serine/threonine kinase 10##AK313350|STK10|6793|serine/threonine kinase 10	0.0	
chrX	42474523	42474616	reg1029983.p1	4.333	+	AB208859 AB590064 HQ258518 AY705392 AF035582 BC117311 BC143454 BC143456 AF032119 NM_001126054 NM_001126055 NM_003688 AK313399	-692244	-	BC070180 NM_080817 AK122626 AK313702 AL832460	-891149	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	-926302	+	BC044787 TSC_hg19_v1_chrX_+_43514289	1039654	+	TSC_hg19_v1_chrX_+_43515423 NM_000240 AK223499	1040845	+	TSC_hg19_v1_chrX_+_43515457 M68840	1040911	+	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##BC044787|MAOA|4128|monoamine oxidase A##NM_000240|MAOA|4128|monoamine oxidase A##AK223499|MAOA|4128|monoamine oxidase A##M68840|MAOA|4128|monoamine oxidase A	0.869252	CTCF.p2:-2:0.869
chr1	119536382	119536538	reg1030490.p1	4.332	+	AK127536 NM_152380	-4282	-	AB527095 AK091816 AX747199 AY555274 BX648110 NM_206996	-808647	-	TSC_hg19_v1_chr1_+_118472364 NM_006784 AK292438 AF083217 BC128385 BC128454 BC148244	-1064082	+	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	146566	+	TSC_hg19_v1_chr1_-_119683274 BC021722 CU692202 BC039889 AK223197 AJ242739 AK296799 BC044575 AK313740 AK300295 NM_015836 NM_201263	146809	-	TSC_hg19_v1_chr1_+_119911431 AK298289 NM_001005783 NM_016527 BC020863 AF231917 AF203975 AY513277	374984	+	AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15##AK091816|SPAG17|200162|sperm associated antigen 17##AY555274|SPAG17|200162|sperm associated antigen 17##BX648110|SPAG17|200162|sperm associated antigen 17##NM_206996|SPAG17|200162|sperm associated antigen 17##NM_006784|WDR3|10885|WD repeat domain 3##AK292438|WDR3|10885|WD repeat domain 3##AF083217|WDR3|10885|WD repeat domain 3##BC021722|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC039889|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK223197|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AJ242739|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK296799|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC044575|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK313740|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK300295|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_015836|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_201263|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)##BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)	0.0	
chr15	23607942	23608032	reg1031991.p1	4.332	+	TSC_hg19_v1_chr15_-_23378229 AF041081 AF041080	-229743	-	TSC_hg19_v1_chr15_-_23378205 AK308640	-229797	-	DQ309040 BC048987 TSC_hg19_v1_chr15_-_23208467	-399576	-	NM_005664	202466	+	AK309383 TSC_hg19_v1_chr15_+_23810820 BC044639 BC013970 BC070293 EU446987 CU692226	202881	+	NM_019066 TSC_hg19_v1_chr15_-_23893004	285017	-	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041080|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AK308640|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##DQ309040|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC048987|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##NM_005664|MKRN3|7681|makorin ring finger protein 3##BC044639|MKRN3|7681|makorin ring finger protein 3##BC070293|MKRN3|7681|makorin ring finger protein 3##EU446987|MKRN3|7681|makorin ring finger protein 3##NM_019066|MAGEL2|54551|MAGE-like 2	0.864445	CTCF.p2:-4:0.836
chr16	84638084	84638218	reg1030150.p1	4.332	+	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	-99860	-	TSC_hg19_v1_chr16_+_84402143 AK300526 AY791884 BX648333 NM_014861 AK316128 CR749829	-236009	+	AF302109 NM_021197 AF169631 TSC_hg19_v1_chr16_+_84328440 AK075061 BC029159 DQ893365 DQ896682	-309663	+	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	13425	-	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	13509	-	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	43983	+	BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##AK300526|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AY791884|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BX648333|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##NM_014861|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AK316128|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##CR749829|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AF302109|WFDC1|58189|WAP four-disulfide core domain 1##NM_021197|WFDC1|58189|WAP four-disulfide core domain 1##AF169631|WFDC1|58189|WAP four-disulfide core domain 1##AK075061|WFDC1|58189|WAP four-disulfide core domain 1##BC029159|WFDC1|58189|WAP four-disulfide core domain 1##DQ893365|WFDC1|58189|WAP four-disulfide core domain 1##DQ896682|WFDC1|58189|WAP four-disulfide core domain 1##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)	0.0	
chr19	864110	864291	reg1001847.p2	4.332	+	BC034529 BC040146 TSC_hg19_v1_chr19_+_860648 CR536575	-3559	+	TSC_hg19_v1_chr19_+_859675 AB590861 AJ313463 DQ884409 M84526 BC051001	-4505	+	TSC_hg19_v1_chr19_+_859663 BC057807 AK300963 NM_001928	-4539	+	TSC_hg19_v1_chr19_-_893188 BC004554 BC011841 BC017282 AF106934	28999	-	TSC_hg19_v1_chr19_-_893218 NM_005481	29017	-	TSC_hg19_v1_chr19_-_913199 BC012775	48997	-	BC034529|CFD|1675|complement factor D (adipsin)##BC040146|CFD|1675|complement factor D (adipsin)##CR536575|CFD|1675|complement factor D (adipsin)##AJ313463|CFD|1675|complement factor D (adipsin)##DQ884409|CFD|1675|complement factor D (adipsin)##M84526|CFD|1675|complement factor D (adipsin)##BC051001|CFD|1675|complement factor D (adipsin)##BC057807|CFD|1675|complement factor D (adipsin)##AK300963|CFD|1675|complement factor D (adipsin)##NM_001928|CFD|1675|complement factor D (adipsin)##BC004554|MED16|10025|mediator complex subunit 16##BC011841|MED16|10025|mediator complex subunit 16##BC017282|MED16|10025|mediator complex subunit 16##AF106934|MED16|10025|mediator complex subunit 16##NM_005481|MED16|10025|mediator complex subunit 16##BC012775|R3HDM4|91300|R3H domain containing 4	0.061718	
chr3	117617699	117617827	reg1035868.p1	4.332	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-1453390	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-1453432	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-2275344	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	1135770	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	1135920	-	AK097667 NM_152538 AK292387	1247134	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.769496	CTCF.p2:1:0.769
chr3	174115795	174115899	reg1031085.p1	4.332	+	BC032555 NM_014932	-999604	+	BC034496 AF345909 AF404758 AK093041 AX747878 NM_031955	-1256839	-	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	-1643545	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	42873	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	461243	+	TSC_hg19_v1_chr3_-_176914267 BX648935	2798403	-	BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BC034496|SPATA16|83893|spermatogenesis associated 16##AF345909|SPATA16|83893|spermatogenesis associated 16##AF404758|SPATA16|83893|spermatogenesis associated 16##AK093041|SPATA16|83893|spermatogenesis associated 16##NM_031955|SPATA16|83893|spermatogenesis associated 16##BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.519985	CTCF.p2:-25:0.520
chr4	185374563	185374744	reg1030086.p1	4.332	+	BC035035 AY358676 AK057370 NM_153343	-235588	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-546742	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-546833	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	21028	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	195948	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	196180	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.102504	
chr10	125626134	125626255	reg1032387.p1	4.331	+	AJ505757 NM_153442 BC112011 BC113462	-200317	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-711838	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-712248	+	BC137492 BC146862 AY358565 NM_198148	25302	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	225705	-	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	226959	-	AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.0	
chr15	31508107	31508270	reg1003605.p2	4.331	+	GQ502181 HM135791 NM_001252020	-54760	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-114271	-	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	-224421	-	NM_001243538	14861	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	111150	+	AJ430383 NM_130901	439353	-	GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10##NM_001243538|LOC283710|283710|uncharacterized LOC283710##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A	0.0	
chr16	10937032	10937156	reg1027971.p2	4.331	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	-24546	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-99390	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-148329	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	34018	+	BC071683 TSC_hg19_v1_chr16_-_11036171	99072	-	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	99141	-	BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)	0.0	
chr16	27379247	27379427	reg1010814.p1	4.331	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-37993	+	TSC_hg19_v1_chr16_+_27325301 BC110343 AK223591 X52425	-54019	+	TSC_hg19_v1_chr16_+_27325254 AK314863 NM_000418 NM_001008699 AK303255	-54083	+	AK292663 NM_181078 NM_181079 AK312825	34150	+	NM_021798 AY358826 AF254067	59267	+	TSC_hg19_v1_chr16_-_27561218 BX648143	181881	-	BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BC110343|IL4R|3566|interleukin 4 receptor##AK223591|IL4R|3566|interleukin 4 receptor##X52425|IL4R|3566|interleukin 4 receptor##AK314863|IL4R|3566|interleukin 4 receptor##NM_000418|IL4R|3566|interleukin 4 receptor##NM_001008699|IL4R|3566|interleukin 4 receptor##AK303255|IL4R|3566|interleukin 4 receptor##AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.0	
chr1	87915186	87915355	reg1034166.p1	4.331	+	TSC_hg19_v1_chr1_+_87797426 BC065818	-117855	+	TSC_hg19_v1_chr1_+_87797312 AY321514	-117945	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	-120589	+	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	1234825	+	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	1441941	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	1442003	-	BC065818|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB	0.0	
chr22	33964056	33964236	reg1029784.p1	4.331	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-509791	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-561420	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-766394	+	AJ007583 AB011181 NM_004737 NM_133642	352224	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1498003	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1689330	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.145616	
chr8	22573102	22573186	reg1031108.p2	4.331	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-22360	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-22639	-	AK294968 AK295834 NM_001199881	-23070	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	212180	-	AK092617 BC034917 NM_001160036	271779	+	NM_001160037	280216	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.0	
chr10	3825038	3825218	reg1032330.p1	4.330	+	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-610123	-	CU678866 TSC_hg19_v1_chr10_-_3214975 AB384562 BC005025 AK225084 AK293788 AK315117 AK294865 AK299464 AK303406 BC095422 BX649017 AF061243	-610158	-	BC045577 TSC_hg19_v1_chr10_-_3214936	-610203	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	2183	-	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	2381	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1043290	+	BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC005025|PITRM1|10531|pitrilysin metallopeptidase 1##AK225084|PITRM1|10531|pitrilysin metallopeptidase 1##AK293788|PITRM1|10531|pitrilysin metallopeptidase 1##AK315117|PITRM1|10531|pitrilysin metallopeptidase 1##AK294865|PITRM1|10531|pitrilysin metallopeptidase 1##AK299464|PITRM1|10531|pitrilysin metallopeptidase 1##AK303406|PITRM1|10531|pitrilysin metallopeptidase 1##BC095422|PITRM1|10531|pitrilysin metallopeptidase 1##BX649017|PITRM1|10531|pitrilysin metallopeptidase 1##AF061243|PITRM1|10531|pitrilysin metallopeptidase 1##BC045577|PITRM1|10531|pitrilysin metallopeptidase 1##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2	0.0	
chr11	120586083	120586252	reg1033021.p1	4.330	+	AB384776 NM_014619 S67803	-55140	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-203702	+	BC063117 NM_001198665 NM_015313	-378550	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	308643	+	NM_005422	387207	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	577238	+	NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.0	
chr1	158618959	158619054	reg1032621.p1	4.330	+	AB529288 NM_001004478	-42778	+	NM_001004477	-69318	-	NM_001160325	-85613	-	M61877 NM_003126	37490	-	NM_001005279 BC137022	51457	-	NM_001005327	68898	-	NM_001004478|OR10Z1|128368|olfactory receptor, family 10, subfamily Z, member 1##NM_001004477|OR10X1|128367|olfactory receptor, family 10, subfamily X, member 1##NM_001160325|OR6P1|128366|olfactory receptor, family 6, subfamily P, member 1##M61877|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)##NM_003126|SPTA1|6708|spectrin, alpha, erythrocytic 1 (elliptocytosis 2)##NM_001005279|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2##BC137022|OR6K2|81448|olfactory receptor, family 6, subfamily K, member 2##NM_001005327|OR6K3|391114|olfactory receptor, family 6, subfamily K, member 3	0.960279	CTCF.p2:-2:0.960
chr12	15334813	15334916	reg1035093.p1	4.330	+	NM_006205 DQ980604 D45399	-208898	+	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	-220316	-	CU688844 BC030218 AY358536 NM_152321 AK056677	-243403	-	AK311016 BC007997 AK295343 AK313881 NM_001190726 NM_032918	39486	-	NM_002848 NM_030667 TSC_hg19_v1_chr12_+_15475264 AB209729	140396	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	140687	+	NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##BC030218|ERP27|121506|endoplasmic reticulum protein 27##AY358536|ERP27|121506|endoplasmic reticulum protein 27##NM_152321|ERP27|121506|endoplasmic reticulum protein 27##AK056677|ERP27|121506|endoplasmic reticulum protein 27##AK311016|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##BC007997|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK295343|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK313881|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_001190726|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_032918|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AB209729|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O	0.0	
chr14	34529574	34529672	reg1034435.p1	4.330	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	-109474	-	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1121133	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1731087	+	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	401864	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	479262	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	569732	-	BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6	0.027419	
chr19	18279252	18279346	reg1001927.p2	4.330	+	TSC_hg19_v1_chr19_+_18264004 BC070082 NM_005027 BC090249	-15267	+	BC063240 TSC_hg19_v1_chr19_+_18263972	-15318	+	TSC_hg19_v1_chr19_+_18208608 AB527184 NM_015016 AB011133	-70690	+	NM_006332 TSC_hg19_v1_chr19_+_18284600 AB049659 AK291551	5292	+	TSC_hg19_v1_chr19_+_18284622 BC021136 BC031020 AF097362	5322	+	TSC_hg19_v1_chr19_+_18284633 AB590284 CU676848 CU689078 DQ884410 DQ892016 DQ895206	5342	+	BC070082|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_005027|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##BC090249|PIK3R2|5296|phosphoinositide-3-kinase, regulatory subunit 2 (beta)##NM_015016|MAST3|23031|microtubule associated serine/threonine kinase 3##AB011133|MAST3|23031|microtubule associated serine/threonine kinase 3##NM_006332|IFI30|10437|interferon, gamma-inducible protein 30##AB049659|IFI30|10437|interferon, gamma-inducible protein 30##AK291551|IFI30|10437|interferon, gamma-inducible protein 30##BC021136|IFI30|10437|interferon, gamma-inducible protein 30##BC031020|IFI30|10437|interferon, gamma-inducible protein 30##DQ884410|IFI30|10437|interferon, gamma-inducible protein 30##DQ892016|IFI30|10437|interferon, gamma-inducible protein 30##DQ895206|IFI30|10437|interferon, gamma-inducible protein 30	0.026063	
chr2	111158966	111159061	reg1030893.p1	4.330	+	TSC_hg19_v1_chr2_-_110970123 BC031315	-188892	-	AJ001815 BC032939 TSC_hg19_v1_chr2_-_110962582 BX571745 NM_000272 NM_001128178 NM_001128179 NM_207181	-196406	-	AF023674 CU679489 BC062574 TSC_hg19_v1_chr2_-_110962561 BC009789 AK299011 AK225600 AK307654	-196458	-	BC094740 NM_001205288 NM_033514	71638	-	NM_005054 U64675	175664	-	AL136868 NM_001037866 NM_001123363 NM_032260	177295	-	BC031315|LINC00116|205251|long intergenic non-protein coding RNA 116##AJ001815|NPHP1|4867|nephronophthisis 1 (juvenile)##BC032939|NPHP1|4867|nephronophthisis 1 (juvenile)##BX571745|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_000272|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128178|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128179|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_207181|NPHP1|4867|nephronophthisis 1 (juvenile)##AF023674|NPHP1|4867|nephronophthisis 1 (juvenile)##BC062574|NPHP1|4867|nephronophthisis 1 (juvenile)##BC009789|NPHP1|4867|nephronophthisis 1 (juvenile)##AK299011|NPHP1|4867|nephronophthisis 1 (juvenile)##AK225600|NPHP1|4867|nephronophthisis 1 (juvenile)##AK307654|NPHP1|4867|nephronophthisis 1 (juvenile)##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5	0.949085	CTCF.p2:8:0.949
chr7	128337813	128337923	reg1026139.p2	4.330	+	BC066973 NM_001012454 NM_001128926 BC105729 BC105730 BC105731 BC047310	-25522	+	NM_018396 TSC_hg19_v1_chr7_+_128116813 AK302775 BC107586 AK002212 BC064929 BC121115 BC121116 AK299960	-221031	+	TSC_hg19_v1_chr7_+_128095931 NM_001098786 NM_013332 AF144755 AK024729 AK222583 BC008573 BC001863 BC093742 BC112183	-241902	+	TSC_hg19_v1_chr7_+_128349114 AK093161 AK302221 AX747964 BC040906 AK310426	11259	+	BC032842 AF367470 NM_032599 AK313608 AK310308 BC037248	17573	+	HM002604 HM002605 HM002606 HM002607 HM002608 HM002609 HM002610 HM002611 HM002612 HM002613 HM002614 HM002615 HM002616 NM_001130674 NM_001199671 NM_001199672 NM_001199673 NM_001199674 NM_001219 TSC_hg19_v1_chr7_+_128379382	41501	+	BC066973|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001012454|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001128926|FAM71F2|346653|family with sequence similarity 71, member F2##BC105729|FAM71F2|346653|family with sequence similarity 71, member F2##BC105730|FAM71F2|346653|family with sequence similarity 71, member F2##BC105731|FAM71F2|346653|family with sequence similarity 71, member F2##BC047310|FAM71F2|346653|family with sequence similarity 71, member F2##NM_018396|METTL2B|55798|methyltransferase like 2B##AK302775|METTL2B|55798|methyltransferase like 2B##BC107586|METTL2B|55798|methyltransferase like 2B##AK002212|METTL2B|55798|methyltransferase like 2B##BC064929|METTL2B|55798|methyltransferase like 2B##BC121115|METTL2B|55798|methyltransferase like 2B##BC121116|METTL2B|55798|methyltransferase like 2B##AK299960|METTL2B|55798|methyltransferase like 2B##NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated##AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK093161|FAM71F1|84691|family with sequence similarity 71, member F1##AK302221|FAM71F1|84691|family with sequence similarity 71, member F1##BC040906|FAM71F1|84691|family with sequence similarity 71, member F1##AK310426|FAM71F1|84691|family with sequence similarity 71, member F1##BC032842|FAM71F1|84691|family with sequence similarity 71, member F1##AF367470|FAM71F1|84691|family with sequence similarity 71, member F1##NM_032599|FAM71F1|84691|family with sequence similarity 71, member F1##AK313608|FAM71F1|84691|family with sequence similarity 71, member F1##AK310308|FAM71F1|84691|family with sequence similarity 71, member F1##BC037248|FAM71F1|84691|family with sequence similarity 71, member F1##HM002604|CALU|813|calumenin##HM002605|CALU|813|calumenin##HM002606|CALU|813|calumenin##HM002607|CALU|813|calumenin##HM002609|CALU|813|calumenin##HM002610|CALU|813|calumenin##HM002611|CALU|813|calumenin##HM002613|CALU|813|calumenin##HM002615|CALU|813|calumenin##HM002616|CALU|813|calumenin##NM_001130674|CALU|813|calumenin##NM_001199671|CALU|813|calumenin##NM_001199672|CALU|813|calumenin##NM_001199673|CALU|813|calumenin##NM_001199674|CALU|813|calumenin##NM_001219|CALU|813|calumenin	0.062025	
chr9	126964664	126964843	reg1020112.p1	4.330	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-190682	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-190870	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-272442	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	55257	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	55492	+	TSC_hg19_v1_chr9_+_127020255 AB026289	55511	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr10	52191701	52191865	reg1033412.p1	4.329	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-183443	-	NM_018232	-353898	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-364061	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	191920	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	307927	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	453610	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.0	
chr1	17468530	17468710	reg1033110.p2	4.329	+	AB587350 AB023211 AB030176 BC009701 TSC_hg19_v1_chr1_-_17445947 AK295783 NM_007365	-22713	-	DQ403007 TSC_hg19_v1_chr1_-_17380528 AK312056 U17248 BC007840 NM_003000	-88045	-	AL354615 AY461712 TSC_hg19_v1_chr1_-_17338424 BC030267 AK290210 NM_001141973 NM_001141974 NM_022089	-130237	-	AK314644 AK026652 AK225541 NM_013358 AB033768 BC130574 BC136402 HQ258487	63045	+	AB026831 NM_016233 BC109091 BC041592 BC109092	106979	+	AF229067 AK314839 NM_012387 AB017919 AK290507 AK309637 BC025718 AB527709 CU693030	166083	+	AB023211|PADI2|11240|peptidyl arginine deiminase, type II##AB030176|PADI2|11240|peptidyl arginine deiminase, type II##BC009701|PADI2|11240|peptidyl arginine deiminase, type II##AK295783|PADI2|11240|peptidyl arginine deiminase, type II##NM_007365|PADI2|11240|peptidyl arginine deiminase, type II##DQ403007|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AK312056|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##U17248|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##BC007840|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##NM_003000|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AL354615|ATP13A2|23400|ATPase type 13A2##AY461712|ATP13A2|23400|ATPase type 13A2##BC030267|ATP13A2|23400|ATPase type 13A2##AK290210|ATP13A2|23400|ATPase type 13A2##NM_001141973|ATP13A2|23400|ATPase type 13A2##NM_001141974|ATP13A2|23400|ATPase type 13A2##NM_022089|ATP13A2|23400|ATPase type 13A2##AK314644|PADI1|29943|peptidyl arginine deiminase, type I##AK026652|PADI1|29943|peptidyl arginine deiminase, type I##AK225541|PADI1|29943|peptidyl arginine deiminase, type I##NM_013358|PADI1|29943|peptidyl arginine deiminase, type I##AB033768|PADI1|29943|peptidyl arginine deiminase, type I##BC130574|PADI1|29943|peptidyl arginine deiminase, type I##BC136402|PADI1|29943|peptidyl arginine deiminase, type I##HQ258487|PADI1|29943|peptidyl arginine deiminase, type I##AB026831|PADI3|51702|peptidyl arginine deiminase, type III##NM_016233|PADI3|51702|peptidyl arginine deiminase, type III##BC109091|PADI3|51702|peptidyl arginine deiminase, type III##BC041592|PADI3|51702|peptidyl arginine deiminase, type III##BC109092|PADI3|51702|peptidyl arginine deiminase, type III##AF229067|PADI4|23569|peptidyl arginine deiminase, type IV##AK314839|PADI4|23569|peptidyl arginine deiminase, type IV##NM_012387|PADI4|23569|peptidyl arginine deiminase, type IV##AB017919|PADI4|23569|peptidyl arginine deiminase, type IV##AK290507|PADI4|23569|peptidyl arginine deiminase, type IV##AK309637|PADI4|23569|peptidyl arginine deiminase, type IV##BC025718|PADI4|23569|peptidyl arginine deiminase, type IV	0.0	
chr12	96793305	96793485	reg1027282.p2	4.329	+	TSC_hg19_v1_chr12_+_96588254 BC017371	-205128	+	TSC_hg19_v1_chr12_+_96588154 NM_005230 Z36715 AK312694	-205269	+	AK301308 TSC_hg19_v1_chr12_-_96429399 AK310522 AK293630	-363980	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	588	-	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	922	-	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	507636	+	BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##NM_005230|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##Z36715|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK312694|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK301308|LTA4H|4048|leukotriene A4 hydrolase##AK293630|LTA4H|4048|leukotriene A4 hydrolase##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1	0.0	
chr19	39050382	39050500	reg1030218.p1	4.329	+	TSC_hg19_v1_chr19_+_38924330 NM_000540 NM_001042723 J05200	-126097	+	AF448437 BC146669 BC150202 BC142721 BC151216 TSC_hg19_v1_chr19_-_38916860 AX721071 AY048119 AY048120 AY048121 FJ768677 FJ768678 FJ768679 FJ768680 FJ768681 FJ768682 NM_001146202 NM_001146203 NM_001146204 NM_001146205 NM_001146206 NM_001146207 NM_170604	-133569	-	TSC_hg19_v1_chr19_+_38893839 BC080606 AK128745	-156540	+	AB527182 TSC_hg19_v1_chr19_-_39108593 NM_001042600 NM_007181	58147	-	TSC_hg19_v1_chr19_+_39109725 NM_013234 AF077051 AF085358 AB019392 AY245432	59272	+	TSC_hg19_v1_chr19_+_39109825 BC007559 AK298635	59375	+	NM_000540|RYR1|6261|ryanodine receptor 1 (skeletal)##NM_001042723|RYR1|6261|ryanodine receptor 1 (skeletal)##J05200|RYR1|6261|ryanodine receptor 1 (skeletal)##AF448437|RASGRP4|115727|RAS guanyl releasing protein 4##BC146669|RASGRP4|115727|RAS guanyl releasing protein 4##BC150202|RASGRP4|115727|RAS guanyl releasing protein 4##BC142721|RASGRP4|115727|RAS guanyl releasing protein 4##BC151216|RASGRP4|115727|RAS guanyl releasing protein 4##AY048119|RASGRP4|115727|RAS guanyl releasing protein 4##AY048120|RASGRP4|115727|RAS guanyl releasing protein 4##AY048121|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768677|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768678|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768679|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768680|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768681|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768682|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146202|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146203|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146204|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146205|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146206|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146207|RASGRP4|115727|RAS guanyl releasing protein 4##NM_170604|RASGRP4|115727|RAS guanyl releasing protein 4##BC080606|FAM98C|147965|family with sequence similarity 98, member C##AK128745|FAM98C|147965|family with sequence similarity 98, member C##NM_001042600|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_007181|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_013234|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF077051|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF085358|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AB019392|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AY245432|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##BC007559|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK298635|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K	0.0	
chr20	17835050	17835116	reg1033429.p1	4.329	+	BC054871 NM_001014977 NM_178477 BC062735	-154485	+	NM_001159495	-160764	+	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	-172200	-	BT007191 AB464237 TSC_hg19_v1_chr20_-_17949155 AK223308 AK001793 AK129505 NM_014426 BC093623 BC093980 BC143274	114131	-	TSC_hg19_v1_chr20_-_17949438 BC002724 BC062638 BC064555 BC073171 AK123903 AK308017 AK296947 BC000100 AF121855 NM_152227	114357	-	TSC_hg19_v1_chr20_+_17949742 AF306686 AK315532 AF306684 AF306685 AK027503 BC016869 NM_052865	114579	+	BC054871|BANF2|140836|barrier to autointegration factor 2##NM_001014977|BANF2|140836|barrier to autointegration factor 2##NM_178477|BANF2|140836|barrier to autointegration factor 2##BC062735|BANF2|140836|barrier to autointegration factor 2##NM_001159495|BANF2|140836|barrier to autointegration factor 2##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BT007191|SNX5|27131|sorting nexin 5##AK223308|SNX5|27131|sorting nexin 5##AK001793|SNX5|27131|sorting nexin 5##AK129505|SNX5|27131|sorting nexin 5##NM_014426|SNX5|27131|sorting nexin 5##BC093623|SNX5|27131|sorting nexin 5##BC093980|SNX5|27131|sorting nexin 5##BC143274|SNX5|27131|sorting nexin 5##BC002724|SNX5|27131|sorting nexin 5##BC062638|SNX5|27131|sorting nexin 5##AK123903|SNX5|27131|sorting nexin 5##AK308017|SNX5|27131|sorting nexin 5##AK296947|SNX5|27131|sorting nexin 5##BC000100|SNX5|27131|sorting nexin 5##AF121855|SNX5|27131|sorting nexin 5##NM_152227|SNX5|27131|sorting nexin 5##AF306686|C20orf72|92667|chromosome 20 open reading frame 72##AK315532|C20orf72|92667|chromosome 20 open reading frame 72##AF306684|C20orf72|92667|chromosome 20 open reading frame 72##AF306685|C20orf72|92667|chromosome 20 open reading frame 72##AK027503|C20orf72|92667|chromosome 20 open reading frame 72##BC016869|C20orf72|92667|chromosome 20 open reading frame 72##NM_052865|C20orf72|92667|chromosome 20 open reading frame 72	0.0	
chr3	142926001	142926093	reg1026567.p1	4.329	+	BC067737 TSC_hg19_v1_chr3_+_142895211	-30876	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-87396	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-205617	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	641220	-	NM_173552 AK315082	764605	+	TSC_hg19_v1_chr3_+_143690915 BC037293	764943	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58	0.0	
chr6	76985575	76985670	reg1030340.p2	4.329	+	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	-203323	-	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-526613	+	TSC_hg19_v1_chr6_+_76458926 NM_004999 BX647397 BC012598	-526706	+	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	1187527	-	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	2591633	+	BC064611 TSC_hg19_v1_chr6_-_79675737 AK000712	2690130	-	HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_004999|MYO6|4646|myosin VI##BX647397|MYO6|4646|myosin VI##BC012598|MYO6|4646|myosin VI##BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC064611|PHIP|55023|pleckstrin homology domain interacting protein##AK000712|PHIP|55023|pleckstrin homology domain interacting protein	0.450823	CTCF.p2:-1:0.451
chr8	103001084	103001177	reg1025838.p2	4.329	+	NM_032041	-197692	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-197930	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-197947	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	135393	-	NM_001040630	136004	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	250043	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.574308	CTCF.p2:-10:0.574
chr10	123813694	123813811	reg1030427.p1	4.328	+	AL833304 TSC_hg19_v1_chr10_+_123754146 AK094848	-59608	+	BC010219 NM_206861 NM_206862 AF528098 AF528099 BC144599 BC144600 BC150627 BC031036	-65020	+	AK308687 BC005212 TSC_hg19_v1_chr10_-_123734710 AK000010 AK222487 AF258584 BC062427 NM_001167865 NM_017615	-78992	-	TSC_hg19_v1_chr10_+_123872541 BC015736	58769	+	BC039311 TSC_hg19_v1_chr10_+_123923007	109223	+	NM_006997 NM_206860 TSC_hg19_v1_chr10_+_123923144 BC141837 BC142673 AF095791	109479	+	AL833304|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AK094848|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC010219|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_206861|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_206862|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AF528098|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AF528099|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC144599|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC144600|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC150627|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC031036|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AK308687|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##BC005212|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##AK000010|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##AK222487|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##AF258584|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##BC062427|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##NM_001167865|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##NM_017615|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##BC015736|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC039311|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_006997|TACC2|10579|transforming, acidic coiled-coil containing protein 2##NM_206860|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC141837|TACC2|10579|transforming, acidic coiled-coil containing protein 2##BC142673|TACC2|10579|transforming, acidic coiled-coil containing protein 2##AF095791|TACC2|10579|transforming, acidic coiled-coil containing protein 2	0.839107	CTCF.p2:-17:0.813
chr11	73018949	73019104	reg1001543.p2	4.328	+	BC009391 NM_004154 BC000571 AF218005 X97058 AK311529 U52464	-35687	+	AF007892 AX775903 NM_176798	-38088	+	NM_176796 NM_176797 AF007891	-43450	+	TSC_hg19_v1_chr11_+_73019337 AK074500	378	+	BC137228 NM_014786 AF378754	639	+	TSC_hg19_v1_chr11_-_73020422 AK300095	1397	-	BC009391|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_004154|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##BC000571|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF218005|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##X97058|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##U52464|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007892|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AX775903|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176798|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176796|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176797|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007891|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK300095|LOC100287837|100287837|uncharacterized LOC100287837	0.0	
chr11	7470726	7470906	reg1034005.p1	4.328	+	AK055003 AB527847 CU692338 TSC_hg19_v1_chr11_+_7273475	-197379	+	TSC_hg19_v1_chr11_+_7273164 BC046367 NM_175733 AK315013	-197623	+	NM_014469 AK292271 AF069682 BC057796 BC029295 AB527964	-360559	+	NM_198474 BX647908 BC092488 TSC_hg19_v1_chr11_+_7506763 AK298137 BC035895 AK297778	35901	+	NM_003621 BC021714 TSC_hg19_v1_chr11_+_7535171	64287	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	64427	+	AK055003|SYT9|143425|synaptotagmin IX##BC046367|SYT9|143425|synaptotagmin IX##NM_175733|SYT9|143425|synaptotagmin IX##AK315013|SYT9|143425|synaptotagmin IX##NM_014469|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AK292271|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AF069682|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC057796|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC029295|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##NM_198474|OLFML1|283298|olfactomedin-like 1##BX647908|OLFML1|283298|olfactomedin-like 1##BC092488|OLFML1|283298|olfactomedin-like 1##AK298137|OLFML1|283298|olfactomedin-like 1##BC035895|OLFML1|283298|olfactomedin-like 1##AK297778|OLFML1|283298|olfactomedin-like 1##NM_003621|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##BC021714|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)	0.0	
chr12	22697639	22697705	reg1037262.p2	4.328	+	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	-206	-	BC117143 BC143859 BC143860 BC143878 TSC_hg19_v1_chr12_-_22697430 AK295862	-283	-	AB385344 AB011100 BC042498 TSC_hg19_v1_chr12_-_22697128 AK299353	-533	-	AF207600 TSC_hg19_v1_chr12_+_22778077 BC066907 NM_001039481 NM_018638	80371	+	TSC_hg19_v1_chr12_+_22778130 CU688188 BC006111 AL137750 AK074425	80475	+	NM_178010 AK098610 AK223536	1039854	-	AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528##BC117143|KIAA0528|9847|KIAA0528##BC143859|KIAA0528|9847|KIAA0528##BC143860|KIAA0528|9847|KIAA0528##BC143878|KIAA0528|9847|KIAA0528##AK295862|KIAA0528|9847|KIAA0528##AB011100|KIAA0528|9847|KIAA0528##BC042498|KIAA0528|9847|KIAA0528##AK299353|KIAA0528|9847|KIAA0528##AF207600|ETNK1|55500|ethanolamine kinase 1##BC066907|ETNK1|55500|ethanolamine kinase 1##NM_001039481|ETNK1|55500|ethanolamine kinase 1##NM_018638|ETNK1|55500|ethanolamine kinase 1##BC006111|ETNK1|55500|ethanolamine kinase 1##AL137750|ETNK1|55500|ethanolamine kinase 1##AK074425|ETNK1|55500|ethanolamine kinase 1##NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5##AK098610|SOX5|6660|SRY (sex determining region Y)-box 5##AK223536|SOX5|6660|SRY (sex determining region Y)-box 5	0.0	
chr12	52445234	52445350	reg1025999.p4	4.328	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	-76	+	AK297526 NM_001202233	-28677	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	-44551	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	18462	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	18506	+	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	140452	-	NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80	0.0	
chr14	52118184	52118357	reg1011734.p1	4.328	+	AL833158 NM_001042481	-162416	+	NM_030755 AB048246 TSC_hg19_v1_chr14_+_51706980 AK302416 BC036460 BC016769 BC050366 AK075395 BC032834 AK303134 AL080080 BC056874 AY358640 AK312905 DQ891674 DQ894860 CU690352	-411321	+	NM_015163 NM_052978	-555849	-	TSC_hg19_v1_chr14_+_52118627 BX161430 NM_152330 BC020521 AK315764 AK055545 BX647863	360	+	NM_001243773 NM_001243774 NM_053064 AK092371	208806	+	TSC_hg19_v1_chr14_+_52327329 AK307171	209053	+	AL833158|FRMD6|122786|FERM domain containing 6##NM_001042481|FRMD6|122786|FERM domain containing 6##NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1##AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1##BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1##BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1##BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1##AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1##BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1##AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1##AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1##BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1##AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1##AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1##NM_015163|TRIM9|114088|tripartite motif containing 9##NM_052978|TRIM9|114088|tripartite motif containing 9##BX161430|FRMD6|122786|FERM domain containing 6##NM_152330|FRMD6|122786|FERM domain containing 6##BC020521|FRMD6|122786|FERM domain containing 6##AK315764|FRMD6|122786|FERM domain containing 6##AK055545|FRMD6|122786|FERM domain containing 6##BX647863|FRMD6|122786|FERM domain containing 6##NM_001243773|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_001243774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	0.143021	
chr2	182835031	182835138	reg1030619.p1	4.328	+	TSC_hg19_v1_chr2_+_182756689 BC052581 BC064499 BC028706 AK291745 BX647257 AB116937 AB385517 BX647967 AK304238 BX648888	-78291	+	TSC_hg19_v1_chr2_+_182756494 NM_001130445 NM_006751 AK093143 AX747951 AB067514	-78553	+	BC009046 TSC_hg19_v1_chr2_-_182545243 AB593068 AB593070 AB593071 AK313799 AB593069 D82347 HQ426678 JF290420 NM_002500	-289783	-	NM_001080545 AK129898 AF494535 BX647581 BC017943	15565	+	AK295657 AB384753 DQ892369 DQ893372 DQ895578 DQ896694 AF110237 NM_005019 BC022480 AF110240 AF110236 NM_001003683 U40370 AK294239	552200	-	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	745990	+	BC052581|SSFA2|6744|sperm specific antigen 2##BC064499|SSFA2|6744|sperm specific antigen 2##BC028706|SSFA2|6744|sperm specific antigen 2##AK291745|SSFA2|6744|sperm specific antigen 2##BX647257|SSFA2|6744|sperm specific antigen 2##AB116937|SSFA2|6744|sperm specific antigen 2##BX647967|SSFA2|6744|sperm specific antigen 2##AK304238|SSFA2|6744|sperm specific antigen 2##BX648888|SSFA2|6744|sperm specific antigen 2##NM_001130445|SSFA2|6744|sperm specific antigen 2##NM_006751|SSFA2|6744|sperm specific antigen 2##AB067514|SSFA2|6744|sperm specific antigen 2##BC009046|NEUROD1|4760|neurogenic differentiation 1##AB593068|NEUROD1|4760|neurogenic differentiation 1##AB593070|NEUROD1|4760|neurogenic differentiation 1##AB593071|NEUROD1|4760|neurogenic differentiation 1##AK313799|NEUROD1|4760|neurogenic differentiation 1##AB593069|NEUROD1|4760|neurogenic differentiation 1##D82347|NEUROD1|4760|neurogenic differentiation 1##HQ426678|CERKL|375298|ceramide kinase-like##JF290420|CERKL|375298|ceramide kinase-like##NM_002500|NEUROD1|4760|neurogenic differentiation 1##NM_001080545|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK129898|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AF494535|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BX647581|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##BC017943|PPP1R1C|151242|protein phosphatase 1, regulatory (inhibitor) subunit 1C##AK295657|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ892369|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ893372|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ895578|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##DQ896694|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110237|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_005019|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##BC022480|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AF110236|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##NM_001003683|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##U40370|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AK294239|PDE1A|5136|phosphodiesterase 1A, calmodulin-dependent##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10	0.018888	
chr22	45858290	45858421	reg1031434.p2	4.328	+	TSC_hg19_v1_chr22_+_45809599 BC003024 BC009904 AL442116	-48727	+	TSC_hg19_v1_chr22_+_45809579 AK098586 NM_015653 AK225722	-48786	+	TSC_hg19_v1_chr22_-_45809502 BC126208 AJ504806 NM_148674	-48871	-	TSC_hg19_v1_chr22_+_45898762 NM_001996 NM_006485 NM_006486 NM_006487 AK075566 AK075460 AK300806 AK316291 BC022497 AF217999 AF126110 U01244 X53741 X53742 X53743 AB528743 DQ894047	40421	+	NM_001167621 NM_013236 AK294348 TSC_hg19_v1_chr22_+_46067713	209340	+	TSC_hg19_v1_chr22_+_46067733 AF086923 AL050282	209374	+	BC003024|RIBC2|26150|RIB43A domain with coiled-coils 2##BC009904|RIBC2|26150|RIB43A domain with coiled-coils 2##AL442116|RIBC2|26150|RIB43A domain with coiled-coils 2##AK098586|RIBC2|26150|RIB43A domain with coiled-coils 2##NM_015653|RIBC2|26150|RIB43A domain with coiled-coils 2##AK225722|RIBC2|26150|RIB43A domain with coiled-coils 2##BC126208|SMC1B|27127|structural maintenance of chromosomes 1B##AJ504806|SMC1B|27127|structural maintenance of chromosomes 1B##NM_148674|SMC1B|27127|structural maintenance of chromosomes 1B##NM_001996|FBLN1|2192|fibulin 1##NM_006485|FBLN1|2192|fibulin 1##NM_006486|FBLN1|2192|fibulin 1##NM_006487|FBLN1|2192|fibulin 1##AK075566|FBLN1|2192|fibulin 1##AK075460|FBLN1|2192|fibulin 1##AK300806|FBLN1|2192|fibulin 1##AK316291|FBLN1|2192|fibulin 1##BC022497|FBLN1|2192|fibulin 1##AF217999|FBLN1|2192|fibulin 1##AF126110|FBLN1|2192|fibulin 1##U01244|FBLN1|2192|fibulin 1##X53741|FBLN1|2192|fibulin 1##X53742|FBLN1|2192|fibulin 1##X53743|FBLN1|2192|fibulin 1##DQ894047|FBLN1|2192|fibulin 1##NM_001167621|ATXN10|25814|ataxin 10##NM_013236|ATXN10|25814|ataxin 10##AK294348|ATXN10|25814|ataxin 10##AF086923|ATXN10|25814|ataxin 10##AL050282|ATXN10|25814|ataxin 10	0.844838	CTCF.p2:0:0.832
chr4	96465994	96466095	reg1030594.p1	4.328	+	TSC_hg19_v1_chr4_+_95679109 NM_001203 U89326	-786938	+	BC026029 AM393306 AM393394 AM393485 AM393621 AM393813 DQ890686 DQ893868 AB587372 CU676108 CU679071 AY598328 BT007328 TSC_hg19_v1_chr4_+_95376500	-1089594	+	TSC_hg19_v1_chr4_+_95373092 BC017902 BC008741 AK291898 AK291624 AK304125 AK296980 AL832157 AL832686 AF061258 AL833151 AL833438	-1092948	+	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	4135	-	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	4332	-	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	295214	+	NM_001203|BMPR1B|658|bone morphogenetic protein receptor, type IB##U89326|BMPR1B|658|bone morphogenetic protein receptor, type IB##BC026029|PDLIM5|10611|PDZ and LIM domain 5##AM393306|PDLIM5|10611|PDZ and LIM domain 5##AM393394|PDLIM5|10611|PDZ and LIM domain 5##AM393485|PDLIM5|10611|PDZ and LIM domain 5##AM393621|PDLIM5|10611|PDZ and LIM domain 5##AM393813|PDLIM5|10611|PDZ and LIM domain 5##DQ890686|PDLIM5|10611|PDZ and LIM domain 5##DQ893868|PDLIM5|10611|PDZ and LIM domain 5##AY598328|PDLIM5|10611|PDZ and LIM domain 5##BT007328|PDLIM5|10611|PDZ and LIM domain 5##BC017902|PDLIM5|10611|PDZ and LIM domain 5##BC008741|PDLIM5|10611|PDZ and LIM domain 5##AK291898|PDLIM5|10611|PDZ and LIM domain 5##AK291624|PDLIM5|10611|PDZ and LIM domain 5##AK304125|PDLIM5|10611|PDZ and LIM domain 5##AK296980|PDLIM5|10611|PDZ and LIM domain 5##AL832157|PDLIM5|10611|PDZ and LIM domain 5##AL832686|PDLIM5|10611|PDZ and LIM domain 5##AF061258|PDLIM5|10611|PDZ and LIM domain 5##AL833151|PDLIM5|10611|PDZ and LIM domain 5##AL833438|PDLIM5|10611|PDZ and LIM domain 5##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2	0.0	
chr10	74454360	74454515	reg1036637.p1	4.327	+	TSC_hg19_v1_chr10_+_74451900 BC034235 NM_138357 AK075439 AK310455 AK311133 AK315519 AK301475 BC010682	-2553	+	TSC_hg19_v1_chr10_-_74385887 NM_001195518 NM_006077	-68520	-	TSC_hg19_v1_chr10_-_74385854 BC004190 BC004216	-68568	-	AK096435 NM_152635 BC126440 AY358339 AY013707 TSC_hg19_v1_chr10_+_74653529	198996	+	AF349540 BC093996 BC111946 BC143532 AY358032 NM_032562 AF339053 AK313712 TSC_hg19_v1_chr10_-_74714543	260074	-	AK311349 TSC_hg19_v1_chr10_-_74714574	260135	-	BC034235|MCU|90550|mitochondrial calcium uniporter##NM_138357|MCU|90550|mitochondrial calcium uniporter##AK075439|MCU|90550|mitochondrial calcium uniporter##AK310455|MCU|90550|mitochondrial calcium uniporter##AK311133|MCU|90550|mitochondrial calcium uniporter##AK315519|MCU|90550|mitochondrial calcium uniporter##AK301475|MCU|90550|mitochondrial calcium uniporter##BC010682|MCU|90550|mitochondrial calcium uniporter##NM_001195518|MICU1|10367|mitochondrial calcium uptake 1##NM_006077|MICU1|10367|mitochondrial calcium uptake 1##BC004190|MICU1|10367|mitochondrial calcium uptake 1##BC004216|MICU1|10367|mitochondrial calcium uptake 1##AK096435|OIT3|170392|oncoprotein induced transcript 3##NM_152635|OIT3|170392|oncoprotein induced transcript 3##BC126440|OIT3|170392|oncoprotein induced transcript 3##AY358339|OIT3|170392|oncoprotein induced transcript 3##AY013707|OIT3|170392|oncoprotein induced transcript 3##AF349540|PLA2G12B|84647|phospholipase A2, group XIIB##BC093996|PLA2G12B|84647|phospholipase A2, group XIIB##BC111946|PLA2G12B|84647|phospholipase A2, group XIIB##BC143532|PLA2G12B|84647|phospholipase A2, group XIIB##AY358032|PLA2G12B|84647|phospholipase A2, group XIIB##NM_032562|PLA2G12B|84647|phospholipase A2, group XIIB##AF339053|PLA2G12B|84647|phospholipase A2, group XIIB##AK313712|PLA2G12B|84647|phospholipase A2, group XIIB##AK311349|PLA2G12B|84647|phospholipase A2, group XIIB	0.897038	CTCF.p2:-4:0.897
chr1	1240708	1240831	reg1031933.p1	4.327	+	NM_001130413 BC040882 AK127357	-24878	+	TSC_hg19_v1_chr1_+_1209415 DQ898177	-31369	+	TSC_hg19_v1_chr1_-_1209229 BC094777 NM_058167 NM_194315 NM_194457 NM_194458	-31539	-	TSC_hg19_v1_chr1_-_1243285 BC051194 NM_030649	2622	-	TSC_hg19_v1_chr1_+_1243987 AK075292 BC034304 NM_153339 AK298218	3229	+	AB463529 AM393218 CR533557 AK056652 AK022675 TSC_hg19_v1_chr1_-_1260041 BC042444 AK092190 AK297350 BC008041 BC020199 BC007978 AK291387 AK021939 AK058018 AL136813 NM_017871 AK023356 AK027767	19255	-	NM_001130413|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##BC040882|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##AK127357|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##BC094777|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_058167|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194315|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194457|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194458|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##BC051194|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3##NM_030649|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3##AK075292|PUSL1|126789|pseudouridylate synthase-like 1##BC034304|PUSL1|126789|pseudouridylate synthase-like 1##NM_153339|PUSL1|126789|pseudouridylate synthase-like 1##AK298218|PUSL1|126789|pseudouridylate synthase-like 1##AM393218|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##CR533557|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK056652|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK022675|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC042444|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK092190|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK297350|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC008041|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC020199|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC007978|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK291387|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK021939|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK058018|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AL136813|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##NM_017871|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK023356|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK027767|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like	0.250444	CTCF.p2:10:0.250
chr20	1378964	1379076	reg1018529.p2	4.327	+	TSC_hg19_v1_chr20_-_1373754 BC119733 BC119732 NM_000801 NM_001199786 NM_054014	-5238	-	TSC_hg19_v1_chr20_-_1373733 D28444 M34539 AK309026	-5298	-	TSC_hg19_v1_chr20_-_1373659 AF205192 AB241123 AB241124 AB241125 BT007066 CR407613 CR542168 DQ891819 AB463639 X52220 BC005147 BC001925	-5388	-	TSC_hg19_v1_chr20_-_1447490 AB590363 CU678204 DQ893189 DQ896513 AK001511 AF078856 AF086909 AF112211 AK223334 AK297403 AK315433 AF283774 AK223341	68457	-	TSC_hg19_v1_chr20_-_1447590 BC002801	68587	-	AK093845 NM_001206736 NM_016143 NM_018839	69316	-	BC119733|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC119732|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_000801|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_001199786|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_054014|FKBP1A|2280|FK506 binding protein 1A, 12kDa##D28444|FKBP1A|2280|FK506 binding protein 1A, 12kDa##M34539|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AK309026|FKBP1A-SDCBP2|100528031|FKBP1A-SDCBP2 readthrough (non-protein coding)##AF205192|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241123|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241124|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241125|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BT007066|FKBP1A|2280|FK506 binding protein 1A, 12kDa##CR407613|FKBP1A|2280|FK506 binding protein 1A, 12kDa##CR542168|FKBP1A|2280|FK506 binding protein 1A, 12kDa##DQ891819|FKBP1A|2280|FK506 binding protein 1A, 12kDa##X52220|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC005147|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC001925|FKBP1A|2280|FK506 binding protein 1A, 12kDa##DQ893189|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##DQ896513|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK001511|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF078856|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF086909|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF112211|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223334|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK297403|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK315433|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF283774|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223341|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##BC002801|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK093845|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_001206736|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_016143|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_018839|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	0.013031	
chr20	35357488	35357578	reg1028079.p1	4.327	+	BC042041 AK291513 NM_032214 NM_175077	-82946	-	TSC_hg19_v1_chr20_+_35234211 BC004446 BC001871 AF274936 S83364	-123229	+	TSC_hg19_v1_chr20_+_35234167 AF112213	-123370	+	TSC_hg19_v1_chr20_-_35374488 AK027665 AK295466 AB044943 AF251054 AK023618 AK295420	16946	-	TSC_hg19_v1_chr20_-_35374542 NM_022477 NM_032013	17019	-	TSC_hg19_v1_chr20_-_35402167 BC035821 AK093031 AX747868 AK290738 NM_001145316 NM_024918 AK301671 AK301840 BC058899 AK023408 BC026011 NM_001145315 NM_001145317 NM_001145318	44652	-	BC042041|SLA2|84174|Src-like-adaptor 2##AK291513|SLA2|84174|Src-like-adaptor 2##NM_032214|SLA2|84174|Src-like-adaptor 2##NM_175077|SLA2|84174|Src-like-adaptor 2##BC004446|C20orf24|55969|chromosome 20 open reading frame 24##BC001871|C20orf24|55969|chromosome 20 open reading frame 24##AF274936|C20orf24|55969|chromosome 20 open reading frame 24##S83364|C20orf24|55969|chromosome 20 open reading frame 24##AF112213|C20orf24|55969|chromosome 20 open reading frame 24##AK027665|NDRG3|57446|NDRG family member 3##AK295466|NDRG3|57446|NDRG family member 3##AB044943|NDRG3|57446|NDRG family member 3##AK023618|NDRG3|57446|NDRG family member 3##AK295420|NDRG3|57446|NDRG family member 3##NM_022477|NDRG3|57446|NDRG family member 3##NM_032013|NDRG3|57446|NDRG family member 3##BC035821|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK093031|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK290738|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145316|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_024918|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301671|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301840|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC058899|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK023408|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC026011|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145315|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145317|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145318|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	0.109086	
chr21	31806484	31806604	reg1033531.p1	4.327	+	AB096941 BC131691 NM_181600	-3962	+	BC103965 NM_181622 AB096940	-8308	-	BC113536 BC113538 AB096939 NM_181599 AJ457066	-38136	+	BC104925 BC104927 AB096942 NM_181623	6076	+	AJ457067 NM_181607 HQ258595 AB096943 BC126284 BC126286	46119	-	NM_181608 AB180041	53166	-	AB096941|KRTAP13-4|284827|keratin associated protein 13-4##BC131691|KRTAP13-4|284827|keratin associated protein 13-4##NM_181600|KRTAP13-4|284827|keratin associated protein 13-4##BC103965|KRTAP13-3|337960|keratin associated protein 13-3##NM_181622|KRTAP13-3|337960|keratin associated protein 13-3##AB096940|KRTAP13-3|337960|keratin associated protein 13-3##BC113536|KRTAP13-1|140258|keratin associated protein 13-1##BC113538|KRTAP13-1|140258|keratin associated protein 13-1##AB096939|KRTAP13-1|140258|keratin associated protein 13-1##NM_181599|KRTAP13-1|140258|keratin associated protein 13-1##AJ457066|KRTAP13-1|140258|keratin associated protein 13-1##BC104925|KRTAP15-1|254950|keratin associated protein 15-1##BC104927|KRTAP15-1|254950|keratin associated protein 15-1##AB096942|KRTAP15-1|254950|keratin associated protein 15-1##NM_181623|KRTAP15-1|254950|keratin associated protein 15-1##AJ457067|KRTAP19-1|337882|keratin associated protein 19-1##NM_181607|KRTAP19-1|337882|keratin associated protein 19-1##AB096943|KRTAP19-1|337882|keratin associated protein 19-1##BC126284|KRTAP19-1|337882|keratin associated protein 19-1##BC126286|KRTAP19-1|337882|keratin associated protein 19-1##NM_181608|KRTAP19-2|337969|keratin associated protein 19-2##AB180041|KRTAP19-2|337969|keratin associated protein 19-2	0.118834	
chr22	34152510	34152660	reg1031167.p2	4.327	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-698230	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-749859	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-954833	+	AJ007583 AB011181 NM_004737 NM_133642	163785	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1309564	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1500891	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr22	40295156	40295285	reg1032234.p1	4.327	+	BC033895 NM_152512	-5427	-	AF129133 AF142567 AF211189 AF393329 NM_001003406 NM_021096	-328463	+	TSC_hg19_v1_chr22_-_39928773 CR456443 BC037573 NM_194326	-366406	-	AY069959 NM_004810 TSC_hg19_v1_chr22_+_40297087 AK303332 AK303512 AF236119 AJ011736 BC025692 AF042380 AF102694	1904	+	TSC_hg19_v1_chr22_+_40297183 AF129476 AF090456 CR456498 Y18051	2027	+	AK303280 AK303657 AK312830 TSC_hg19_v1_chr22_+_40322634 AK303470	27404	+	BC033895|ENTHD1|150350|ENTH domain containing 1##NM_152512|ENTHD1|150350|ENTH domain containing 1##AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##CR456443|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC037573|RPS19BP1|91582|ribosomal protein S19 binding protein 1##NM_194326|RPS19BP1|91582|ribosomal protein S19 binding protein 1##AY069959|GRAP2|9402|GRB2-related adaptor protein 2##NM_004810|GRAP2|9402|GRB2-related adaptor protein 2##AK303332|GRAP2|9402|GRB2-related adaptor protein 2##AK303512|GRAP2|9402|GRB2-related adaptor protein 2##AF236119|GRAP2|9402|GRB2-related adaptor protein 2##AJ011736|GRAP2|9402|GRB2-related adaptor protein 2##BC025692|GRAP2|9402|GRB2-related adaptor protein 2##AF042380|GRAP2|9402|GRB2-related adaptor protein 2##AF102694|GRAP2|9402|GRB2-related adaptor protein 2##AF129476|GRAP2|9402|GRB2-related adaptor protein 2##AF090456|GRAP2|9402|GRB2-related adaptor protein 2##CR456498|GRAP2|9402|GRB2-related adaptor protein 2##Y18051|GRAP2|9402|GRB2-related adaptor protein 2##AK303280|GRAP2|9402|GRB2-related adaptor protein 2##AK303657|GRAP2|9402|GRB2-related adaptor protein 2##AK312830|GRAP2|9402|GRB2-related adaptor protein 2##AK303470|GRAP2|9402|GRB2-related adaptor protein 2	0.0	
chr4	48946783	48946937	reg1033167.p1	4.327	+	TSC_hg19_v1_chr4_-_48908795 CR749310 BC032808 AK298305 NM_001014446 NM_152398	-38081	-	TSC_hg19_v1_chr4_+_48833104 NM_001079840 NM_001079841 NM_017830 AK297864 AF323665 AF324350 AK000462 BC003409 NM_001079839 NM_001079842 NM_001168254 BC088361	-113609	+	TSC_hg19_v1_chr4_-_48782286 BC040987 BC050336 NM_015030	-164562	-	AK025164 NM_025087 BC137387 BC137388	41412	+	AK124346 NM_001040402 NM_015115 TSC_hg19_v1_chr4_+_52709318 BC053897 AK294896 BX537944 AK027051 D87466 BC041702 AM392554 AM392637 AM392729 AM393240	3762426	+	CR749811 NM_001024611	3936925	-	CR749310|OCIAD2|132299|OCIA domain containing 2##BC032808|OCIAD2|132299|OCIA domain containing 2##AK298305|OCIAD2|132299|OCIA domain containing 2##NM_001014446|OCIAD2|132299|OCIA domain containing 2##NM_152398|OCIAD2|132299|OCIA domain containing 2##NM_001079840|OCIAD1|54940|OCIA domain containing 1##NM_001079841|OCIAD1|54940|OCIA domain containing 1##NM_017830|OCIAD1|54940|OCIA domain containing 1##AK297864|OCIAD1|54940|OCIA domain containing 1##AF323665|OCIAD1|54940|OCIA domain containing 1##AF324350|OCIAD1|54940|OCIA domain containing 1##AK000462|OCIAD1|54940|OCIA domain containing 1##BC003409|OCIAD1|54940|OCIA domain containing 1##NM_001079839|OCIAD1|54940|OCIA domain containing 1##NM_001079842|OCIAD1|54940|OCIA domain containing 1##NM_001168254|OCIAD1|54940|OCIA domain containing 1##BC088361|OCIAD1|54940|OCIA domain containing 1##BC040987|FRYL|285527|FRY-like##BC050336|FRYL|285527|FRY-like##NM_015030|FRYL|285527|FRY-like##AK025164|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##NM_025087|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137387|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##BC137388|CWH43|80157|cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)##AK124346|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_001040402|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##NM_015115|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC053897|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK294896|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BX537944|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AK027051|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##D87466|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##BC041702|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392554|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392637|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM392729|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##AM393240|DCUN1D4|23142|DCN1, defective in cullin neddylation 1, domain containing 4 (S. cerevisiae)##CR749811|LRRC66|339977|leucine rich repeat containing 66##NM_001024611|LRRC66|339977|leucine rich repeat containing 66	0.98487	CTCF.p2:9:0.985
chr8	14314777	14314887	reg1031974.p1	4.327	+	AK058131 NM_001007090 BC031245 AF394908 CU689130	-890407	+	BC054511 AK291682 AK024773 AK225098 AB051510 BC049842 NM_024767 NM_182643	-942527	-	TSC_hg19_v1_chr8_-_13134056 AK025544	-1180787	-	NM_139167	780959	-	NM_006765 NM_178234 BC010370 TSC_hg19_v1_chr8_+_15397731	1082831	+	TSC_hg19_v1_chr8_+_15397771 U42349 BT020002 DQ892936 DQ896185	1083018	+	AK058131|C8orf48|157773|chromosome 8 open reading frame 48##NM_001007090|C8orf48|157773|chromosome 8 open reading frame 48##BC031245|C8orf48|157773|chromosome 8 open reading frame 48##AF394908|C8orf48|157773|chromosome 8 open reading frame 48##BC054511|DLC1|10395|deleted in liver cancer 1##AK291682|DLC1|10395|deleted in liver cancer 1##AK024773|DLC1|10395|deleted in liver cancer 1##AK225098|DLC1|10395|deleted in liver cancer 1##AB051510|DLC1|10395|deleted in liver cancer 1##BC049842|DLC1|10395|deleted in liver cancer 1##NM_024767|DLC1|10395|deleted in liver cancer 1##NM_182643|DLC1|10395|deleted in liver cancer 1##AK025544|DLC1|10395|deleted in liver cancer 1##NM_139167|SGCZ|137868|sarcoglycan, zeta##NM_006765|TUSC3|7991|tumor suppressor candidate 3##NM_178234|TUSC3|7991|tumor suppressor candidate 3##BC010370|TUSC3|7991|tumor suppressor candidate 3##U42349|TUSC3|7991|tumor suppressor candidate 3##BT020002|TUSC3|7991|tumor suppressor candidate 3##DQ892936|TUSC3|7991|tumor suppressor candidate 3##DQ896185|TUSC3|7991|tumor suppressor candidate 3	0.830068	CTCF.p2:-14:0.830
chr9	131495693	131495809	reg1017742.p2	4.327	+	CU690564 BC009280 BC048251 TSC_hg19_v1_chr9_-_131486407 AK027430 AK075332 AK315746 AK092843 AX747760 NM_032799	-9362	-	TSC_hg19_v1_chr9_+_131465139 BC032794 BC041581 BC062558 EU831416 EU831509	-30651	+	TSC_hg19_v1_chr9_+_131464821 BC023327 NM_013355	-30908	+	TSC_hg19_v1_chr9_-_131534148 AK314911 BC033884	38266	-	TSC_hg19_v1_chr9_-_131534207 BC052563 NM_006336	38507	-	NM_018201 TSC_hg19_v1_chr9_+_131549531	53769	+	BC009280|ZDHHC12|84885|zinc finger, DHHC-type containing 12##BC048251|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK027430|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK075332|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK315746|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK092843|ZDHHC12|84885|zinc finger, DHHC-type containing 12##NM_032799|ZDHHC12|84885|zinc finger, DHHC-type containing 12##BC032794|PKN3|29941|protein kinase N3##BC041581|PKN3|29941|protein kinase N3##BC062558|PKN3|29941|protein kinase N3##EU831416|PKN3|29941|protein kinase N3##EU831509|PKN3|29941|protein kinase N3##BC023327|PKN3|29941|protein kinase N3##NM_013355|PKN3|29941|protein kinase N3##AK314911|ZER1|10444|zer-1 homolog (C. elegans)##BC033884|ZER1|10444|zer-1 homolog (C. elegans)##BC052563|ZER1|10444|zer-1 homolog (C. elegans)##NM_006336|ZER1|10444|zer-1 homolog (C. elegans)##NM_018201|TBC1D13|54662|TBC1 domain family, member 13	0.997884	CTCF.p2:38:0.998
chr9	132250950	132251108	reg1028332.p1	4.327	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-167734	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-310489	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-310522	-	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	325	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	412	+	BC112353 AK093122 AX747938 NM_199350	132008	-	AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50	0.223947	
chr17	43578873	43578971	reg1028732.p2	4.326	+	TSC_hg19_v1_chr17_-_43568133 NM_014798	-10768	-	TSC_hg19_v1_chr17_-_43568118 AK299116 BC053848 AB002354 BC064361	-10820	-	TSC_hg19_v1_chr17_-_43510292 BC067345 NM_174919	-68635	-	TSC_hg19_v1_chr17_+_43861628 NM_001145146 NM_001145147 NM_001145148 NM_004382	282714	+	BC037967 HM852949 TSC_hg19_v1_chr17_+_43861685 X72304	282756	+	BC025401 NM_175882 BC022041	343334	+	NM_014798|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##AK299116|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC053848|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##AB002354|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC064361|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC067345|ARHGAP27|201176|Rho GTPase activating protein 27##NM_174919|ARHGAP27|201176|Rho GTPase activating protein 27##NM_001145146|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145147|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145148|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_004382|CRHR1|1394|corticotropin releasing hormone receptor 1##BC037967|CRHR1|1394|corticotropin releasing hormone receptor 1##X72304|CRHR1|1394|corticotropin releasing hormone receptor 1##BC025401|IMP5|162540|intramembrane protease 5##NM_175882|IMP5|162540|intramembrane protease 5##BC022041|IMP5|162540|intramembrane protease 5	0.023164	
chr8	42035283	42035463	reg1030006.p2	4.326	+	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	-24840	+	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	-125874	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-281063	-	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	29715	-	AK289387 AK290575 NM_000930 NM_033011 TSC_hg19_v1_chr8_-_42065195	29821	-	TSC_hg19_v1_chr8_+_42128819 NM_001190720 NM_001242778 NM_001556	93435	+	NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue##AK289387|PLAT|5327|plasminogen activator, tissue##AK290575|PLAT|5327|plasminogen activator, tissue##NM_000930|PLAT|5327|plasminogen activator, tissue##NM_033011|PLAT|5327|plasminogen activator, tissue##NM_001190720|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001242778|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001556|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	0.0	
chr11	65541572	65541746	reg1031205.p2	4.325	+	TSC_hg19_v1_chr11_-_65488270 DQ892277 DQ895477 AF312034 AK024627 AK225131 AK297660 BC023588 AF346606 NM_032193	-53384	-	TSC_hg19_v1_chr11_-_65487976 L08647	-53690	-	BC117167 BC143290 BC143296 BC093032 TSC_hg19_v1_chr11_+_65479722 AK304664 BC064912 U67734 AB463743 HQ258620 BC013211 BC000166 U40989	-61884	+	NM_138368	6162	-	NM_004561 BC059408 TSC_hg19_v1_chr11_+_65554533	12864	+	TSC_hg19_v1_chr11_+_65554569 AK291711 BX648725	12936	+	DQ892277|RNASEH2C|84153|ribonuclease H2, subunit C##DQ895477|RNASEH2C|84153|ribonuclease H2, subunit C##AF312034|RNASEH2C|84153|ribonuclease H2, subunit C##AK024627|RNASEH2C|84153|ribonuclease H2, subunit C##AK225131|RNASEH2C|84153|ribonuclease H2, subunit C##AK297660|RNASEH2C|84153|ribonuclease H2, subunit C##BC023588|RNASEH2C|84153|ribonuclease H2, subunit C##AF346606|RNASEH2C|84153|ribonuclease H2, subunit C##NM_032193|RNASEH2C|84153|ribonuclease H2, subunit C##L08647|RNASEH2C|84153|ribonuclease H2, subunit C##BC117167|KAT5|10524|K(lysine) acetyltransferase 5##BC143290|KAT5|10524|K(lysine) acetyltransferase 5##BC143296|KAT5|10524|K(lysine) acetyltransferase 5##BC093032|KAT5|10524|K(lysine) acetyltransferase 5##AK304664|KAT5|10524|K(lysine) acetyltransferase 5##BC064912|KAT5|10524|K(lysine) acetyltransferase 5##U67734|KAT5|10524|K(lysine) acetyltransferase 5##HQ258620|KAT5|10524|K(lysine) acetyltransferase 5##BC013211|KAT5|10524|K(lysine) acetyltransferase 5##BC000166|KAT5|10524|K(lysine) acetyltransferase 5##U40989|KAT5|10524|K(lysine) acetyltransferase 5##NM_138368|DKFZp761E198|91056|adaptor protein 5##NM_004561|OVOL1|5017|ovo-like 1(Drosophila)##BC059408|OVOL1|5017|ovo-like 1(Drosophila)##AK291711|OVOL1|5017|ovo-like 1(Drosophila)##BX648725|OVOL1|5017|ovo-like 1(Drosophila)	0.623449	CTCF.p2:1:0.623
chr12	71243289	71243403	reg1036447.p1	4.325	+	AK295951 NM_001207015	-60642	-	TSC_hg19_v1_chr12_-_71148389 BC092469 NM_130846 U77916 BX571751 AK304457 AK304672 NM_001207016	-94886	-	X82635 TSC_hg19_v1_chr12_-_71148363 U77917 BC072386	-94996	-	Z79693 U42361 TSC_hg19_v1_chr12_-_71314484 AK312376	71025	-	TSC_hg19_v1_chr12_-_71314519 D64053 NM_002849	71202	-	AK223022 TSC_hg19_v1_chr12_-_71551590 AK313112	308245	-	AK295951|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##NM_001207015|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC092469|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##NM_130846|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##U77916|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BX571751|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##AK304457|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##AK304672|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##NM_001207016|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##X82635|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##U77917|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##BC072386|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##Z79693|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##U42361|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##AK312376|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##D64053|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##NM_002849|PTPRR|5801|protein tyrosine phosphatase, receptor type, R##AK223022|TSPAN8|7103|tetraspanin 8##AK313112|TSPAN8|7103|tetraspanin 8	0.078265	
chr16	11276958	11277138	reg1021264.p1	4.325	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-238605	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-240813	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-240882	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	73002	-	X63758 BC096135 BC096136 BC096137 NM_005425	86090	-	NM_021247	90403	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.052878	
chr16	15232776	15232887	reg1036276.p1	4.325	+	AB527833 AK300253 HQ258337 BC036182 AK314769 AK316520 BC132688 BC132690 BC104660 AJ272050 AF227156 NM_018427 AK225662	-44703	-	CU675948 AF092440 BC017336 NM_173474 AK300557 TSC_hg19_v1_chr16_-_15149897	-82954	-	AY203955 TSC_hg19_v1_chr16_+_15069016 DQ111782	-163799	+	TSC_hg19_v1_chr16_+_15489610 DQ004255 DQ004256 NM_001128423 NM_173803	256770	+	TSC_hg19_v1_chr16_+_15489637 AK096918 AK293380 BC061514	256819	+	AK057180 NM_033201 TSC_hg19_v1_chr16_+_15528363 AK293431 BC008967	295569	+	AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##HQ258337|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AF092440|NTAN1|123803|N-terminal asparagine amidase##BC017336|NTAN1|123803|N-terminal asparagine amidase##NM_173474|NTAN1|123803|N-terminal asparagine amidase##AK300557|NTAN1|123803|N-terminal asparagine amidase##AY203955|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##DQ111782|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##DQ004255|MPV17L|255027|MPV17 mitochondrial membrane protein-like##DQ004256|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_001128423|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_173803|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK096918|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK293380|MPV17L|255027|MPV17 mitochondrial membrane protein-like##BC061514|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK057180|C16orf45|89927|chromosome 16 open reading frame 45##NM_033201|C16orf45|89927|chromosome 16 open reading frame 45##AK293431|C16orf45|89927|chromosome 16 open reading frame 45##BC008967|C16orf45|89927|chromosome 16 open reading frame 45	0.681963	CTCF.p2:-1:0.682
chr18	46423553	46423688	reg1023561.p1	4.325	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-357847	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-487911	-	AM988836 AK296709 NM_001039360 EF120357	-759921	-	AK131394 NM_001190823	45527	-	AK301535 NM_001190822	52082	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	53147	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.5397	CTCF.p2:3:0.228	CTCF.p2:81:0.312
chr18	60469912	60470033	reg1034649.p2	4.325	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-85664	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-86046	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	-87308	+	TSC_hg19_v1_chr18_-_60795898 AF401211	325963	-	BC027258 NM_000633 NM_000657	516588	-	TSC_hg19_v1_chr18_-_60986977 X06487	517021	-	BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2	0.899007	CTCF.p2:4:0.899
chr2	212744202	212744310	reg1029117.p1	4.325	+	AK316425 NM_001122634 AK302778 AY317138	-1286171	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-1322867	+	NM_001122633 AB208800	-1401838	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	659059	-	AK301503 AF130863 NM_016260	1270799	-	BC028936 NM_001079526	1272076	-	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	0.0	
chr3	116236300	116236442	reg1034010.p1	4.325	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-71998	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-72040	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-893952	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	2517162	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	2517312	-	AK097667 NM_152538 AK292387	2628526	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.992942	CTCF.p2:-22:0.993
chr4	54568559	54568663	reg1023352.p1	4.325	+	AK056823 NM_001126328 TSC_hg19_v1_chr4_-_54457761	-110867	-	BC022983 TSC_hg19_v1_chr4_-_54457654	-110968	-	TSC_hg19_v1_chr4_-_54424402 NM_032622	-144193	-	AB463552 DQ890711 DQ893893 TSC_hg19_v1_chr4_-_54930576	361915	-	TSC_hg19_v1_chr4_-_54930764 AF159423 BC034691	362124	-	TSC_hg19_v1_chr4_-_54930773 AK312427 NM_012110	362186	-	AK056823|LNX1|84708|ligand of numb-protein X 1##NM_001126328|LNX1|84708|ligand of numb-protein X 1##BC022983|LNX1|84708|ligand of numb-protein X 1##NM_032622|LNX1|84708|ligand of numb-protein X 1##DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2##DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2##AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2##BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2##AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	0.0	
chr6	111804304	111804408	reg1028946.p1	4.325	+	BC035823 TSC_hg19_v1_chr6_-_111804371	-3	-	BC038986 AF303220 AF157476 AF179428 AF179429 TSC_hg19_v1_chr6_-_111804167	-208	-	TSC_hg19_v1_chr6_+_111580568 BC036115	-223784	+	AF071798 NM_002912 TSC_hg19_v1_chr6_-_111804420 AF058701	68	-	TSC_hg19_v1_chr6_+_111804739 BC043575 BX647114 BC031311	344	+	NM_001164283	84164	-	BC035823|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF303220|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF157476|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179428|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179429|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##BC036115|KIAA1919|91749|KIAA1919##AF071798|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##NM_002912|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF058701|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##BC043575|TRAF3IP2-AS1|643749|TRAF3IP2 antisense RNA 1 (non-protein coding)##BX647114|TRAF3IP2-AS1|643749|TRAF3IP2 antisense RNA 1 (non-protein coding)##BC031311|TRAF3IP2-AS1|643749|TRAF3IP2 antisense RNA 1 (non-protein coding)##NM_001164283|TRAF3IP2|10758|TRAF3 interacting protein 2	0.126373	
chr7	74057654	74057819	reg1024488.p1	4.325	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	-189301	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	-189428	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	-189572	+	AK292832 TSC_hg19_v1_chr7_+_74072028 AF015553 NM_001163636 NM_001518 NM_032999 NM_033000 NM_033001	14285	+	TSC_hg19_v1_chr7_+_74072046 BC070484	14308	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	14386	+	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AK292832|GTF2I|2969|general transcription factor IIi##AF015553|GTF2I|2969|general transcription factor IIi##NM_001163636|GTF2I|2969|general transcription factor IIi##NM_001518|GTF2I|2969|general transcription factor IIi##NM_032999|GTF2I|2969|general transcription factor IIi##NM_033000|GTF2I|2969|general transcription factor IIi##NM_033001|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi	0.0	
chr10	56560985	56561072	reg1033778.p1	4.324	+	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	-30	-	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-2029602	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-2486913	+	NM_001190478 TSC_hg19_v1_chr10_+_57358800	797746	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	1559986	-	AK093808 BC020979 AK293416 TSC_hg19_v1_chr10_-_58121021 AK298148 BC110399 NM_001005413 NM_007057 NM_032997	1559998	-	AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor##AK093808|ZWINT|11130|ZW10 interactor##BC020979|ZWINT|11130|ZW10 interactor##AK293416|ZWINT|11130|ZW10 interactor##AK298148|ZWINT|11130|ZW10 interactor##BC110399|ZWINT|11130|ZW10 interactor##NM_001005413|ZWINT|11130|ZW10 interactor##NM_007057|ZWINT|11130|ZW10 interactor##NM_032997|ZWINT|11130|ZW10 interactor	0.0	
chr13	20756434	20756524	reg1005729.p1	4.324	+	NM_021954	-21297	-	TSC_hg19_v1_chr13_+_20532911 AJ224901 BX647944 NM_001190965	-223514	+	TSC_hg19_v1_chr13_+_20532881 AK226118 AK289741	-223595	+	BC017048 BC071703 TSC_hg19_v1_chr13_-_20767078 AK225966	10579	-	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	10632	-	NM_006783	48892	-	NM_021954|GJA3|2700|gap junction protein, alpha 3, 46kDa##AJ224901|ZMYM2|7750|zinc finger, MYM-type 2##BX647944|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190965|ZMYM2|7750|zinc finger, MYM-type 2##AK226118|ZMYM2|7750|zinc finger, MYM-type 2##AK289741|ZMYM2|7750|zinc finger, MYM-type 2##BC017048|GJB2|2706|gap junction protein, beta 2, 26kDa##BC071703|GJB2|2706|gap junction protein, beta 2, 26kDa##AK225966|GJB2|2706|gap junction protein, beta 2, 26kDa##AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa	0.981718	
chr19	58987483	58987635	reg1029958.p2	4.324	+	AK092341 TSC_hg19_v1_chr19_+_58978664	-8892	+	TSC_hg19_v1_chr19_+_58978445 NM_014347 BC007717 AF060503	-9131	+	TSC_hg19_v1_chr19_+_58962982 AK127750 NM_207395 BC140881 BC140882 BX648711 AK131452	-24564	+	AY280800 TSC_hg19_v1_chr19_+_58987792 AK000633 AY279351 NM_017908 BC017206 AK026153	224	+	AB527212 TSC_hg19_v1_chr19_-_59023360 AK298446 AK123036 NM_012254	35818	-	BC024738 NM_032792 TSC_hg19_v1_chr19_-_59030968	43394	-	AK092341|ZNF324|25799|zinc finger protein 324##NM_014347|ZNF324|25799|zinc finger protein 324##BC007717|ZNF324|25799|zinc finger protein 324##AF060503|ZNF324|25799|zinc finger protein 324##AK127750|ZNF324B|388569|zinc finger protein 324B##NM_207395|ZNF324B|388569|zinc finger protein 324B##BC140881|ZNF324B|388569|zinc finger protein 324B##BC140882|ZNF324B|388569|zinc finger protein 324B##BX648711|ZNF324B|388569|zinc finger protein 324B##AK131452|ZNF324B|388569|zinc finger protein 324B##AY280800|ZNF446|55663|zinc finger protein 446##AK000633|ZNF446|55663|zinc finger protein 446##AY279351|ZNF446|55663|zinc finger protein 446##NM_017908|ZNF446|55663|zinc finger protein 446##BC017206|ZNF446|55663|zinc finger protein 446##AK026153|ZNF446|55663|zinc finger protein 446##AK298446|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##AK123036|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##NM_012254|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45##NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45	0.0	
chr2	80465958	80466075	reg1030783.p1	4.324	+	TSC_hg19_v1_chr2_+_79740175 AK295181	-725801	+	NM_001164883 NM_004389 BC052996 TSC_hg19_v1_chr2_+_79740147 BC040458	-725908	+	AK291973 AK311523 AK311523 AK311526 NM_138938 NM_002580 NM_138937	-1079138	-	AB587576 AY182024 HQ257885 TSC_hg19_v1_chr2_-_80530981	64947	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	65509	-	TSC_hg19_v1_chr2_-_80531719 AK290512	65709	-	AK295181|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_001164883|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_004389|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC052996|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC040458|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##AK291973|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311526|REG3A|5068|regenerating islet-derived 3 alpha##NM_138938|REG3A|5068|regenerating islet-derived 3 alpha##NM_002580|REG3A|5068|regenerating islet-derived 3 alpha##NM_138937|REG3A|5068|regenerating islet-derived 3 alpha##AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##HQ257885|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	0.185868	
chr5	17225393	17225459	reg1034021.p2	4.324	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-7586	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-7814	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-289041	-	AK295087 BC031051 NM_001167667 NM_004934	2762896	-	TSC_hg19_v1_chr5_+_21459621 AK290693	4234183	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	4234222	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.0	
chr10	12647873	12647989	reg1030524.p1	4.323	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-256154	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-256214	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	-256356	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	395768	-	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	494214	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	555637	+	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10	0.0	
chr12	33758890	33758979	reg1030871.p2	4.323	+	BC101024 BC101025 TSC_hg19_v1_chr12_-_33592705 AY198413 NM_198992	-166268	-	EU520483 EU520484 EU520485 EU520486 AB590796 HQ258660 TSC_hg19_v1_chr12_-_33049733 X97675 BC094762 BC126199 BC143966 BC143967 BC070083 NM_001005242 NM_004572	-709199	-	AF132939 CU677373 DQ893063 DQ896315 BC015625 TSC_hg19_v1_chr12_-_32908835 AK024057 AK026619 AK130935 NM_001040436	-850093	-	AJ312278 NM_032834	416281	+	TSC_hg19_v1_chr12_+_34175402 BC022336	416452	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	416539	+	BC101024|SYT10|341359|synaptotagmin X##BC101025|SYT10|341359|synaptotagmin X##AY198413|SYT10|341359|synaptotagmin X##NM_198992|SYT10|341359|synaptotagmin X##EU520483|PKP2|5318|plakophilin 2##EU520484|PKP2|5318|plakophilin 2##EU520485|PKP2|5318|plakophilin 2##EU520486|PKP2|5318|plakophilin 2##HQ258660|PKP2|5318|plakophilin 2##X97675|PKP2|5318|plakophilin 2##BC094762|PKP2|5318|plakophilin 2##BC126199|PKP2|5318|plakophilin 2##BC143966|PKP2|5318|plakophilin 2##BC143967|PKP2|5318|plakophilin 2##BC070083|PKP2|5318|plakophilin 2##NM_001005242|PKP2|5318|plakophilin 2##NM_004572|PKP2|5318|plakophilin 2##AF132939|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##DQ893063|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##DQ896315|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##BC015625|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK024057|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK026619|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AK130935|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##NM_001040436|YARS2|51067|tyrosyl-tRNA synthetase 2, mitochondrial##AJ312278|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_032834|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC022336|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)	0.189648	
chr22	24666895	24666993	reg1029593.p2	4.323	+	TSC_hg19_v1_chr22_+_24666804 NM_001145468 NM_015330 AK097129 AK301482 AB209022 AL832425 BC005093 BC136471	-104	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	-25965	-	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	-89500	+	TSC_hg19_v1_chr22_+_24819870 EU036694	152936	+	NM_000675 AK123058 EU036693 AK301420 BC013780	156621	+	AK314727 CR627429 CR456375 NM_016327 BC131703 TSC_hg19_v1_chr22_+_24891299 AF163312 AB013885 BC033388 AB528843 BC139840 BC139843 CU013080 CU013368	224297	+	NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##EU036694|ADORA2A|135|adenosine A2a receptor##NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor##AK314727|UPB1|51733|ureidopropionase, beta##CR627429|UPB1|51733|ureidopropionase, beta##CR456375|UPB1|51733|ureidopropionase, beta##NM_016327|UPB1|51733|ureidopropionase, beta##BC131703|UPB1|51733|ureidopropionase, beta##AF163312|UPB1|51733|ureidopropionase, beta##AB013885|UPB1|51733|ureidopropionase, beta##BC033388|UPB1|51733|ureidopropionase, beta##BC139840|UPB1|51733|ureidopropionase, beta##BC139843|UPB1|51733|ureidopropionase, beta##CU013080|UPB1|51733|ureidopropionase, beta##CU013368|UPB1|51733|ureidopropionase, beta	0.0	
chr8	119511548	119511722	reg1032093.p1	4.323	+	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	-387674	-	TSC_hg19_v1_chr8_+_118532970 BC008226 FM179284 AB463866 DQ891518 DQ894708 AY083305	-978593	+	TSC_hg19_v1_chr8_+_118532964 NM_080651	-978677	+	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	122490	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	122572	-	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	452585	-	AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##BC008226|MED30|90390|mediator complex subunit 30##FM179284|MED30|90390|mediator complex subunit 30##DQ891518|MED30|90390|mediator complex subunit 30##DQ894708|MED30|90390|mediator complex subunit 30##AY083305|MED30|90390|mediator complex subunit 30##NM_080651|MED30|90390|mediator complex subunit 30##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b	0.0	
chr1	19008001	19008107	reg1033168.p1	4.322	+	NM_001135254 NM_002584 NM_013945 X96743	-50555	+	NM_152375	-200631	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	-573777	+	NM_152232 AB527225	178101	-	AK294552 NM_001161504	209330	-	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	221100	-	NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##NM_152375|KLHDC7A|127707|kelch domain containing 7A##AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1	0.994834	CTCF.p2:16:0.995
chr12	116579057	116579168	reg1029347.p1	4.322	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-1456972	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1732894	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1735188	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	135838	-	TSC_hg19_v1_chr12_-_116715263 AY338463	136048	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	392117	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.371272	CTCF.p2:-2:0.371
chr13	83332318	83332425	reg1029612.p2	4.322	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-2417307	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-2419329	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-3276816	+	TSC_hg19_v1_chr13_-_84456424 BC051738	1124054	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	1124129	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	3041068	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.993537	CTCF.p2:0:0.983
chr16	33618929	33619037	reg1018161.p1	4.322	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-356850	+	AL133588 NM_016212	-357469	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-413385	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	13036289	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	13036323	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	13104079	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	1.048485	CTCF.p2:-9:0.997
chr17	75488040	75488221	reg1030870.p1	4.322	+	AK056495 NM_001113495	-16806	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-40741	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-41348	+	TSC_hg19_v1_chr17_+_75543021 AK096234	54890	+	BC039479 NM_001142640 NM_018996	512152	+	TSC_hg19_v1_chr17_-_76124768 AK074065	636642	-	AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK074065|TMC6|11322|transmembrane channel-like 6	0.0	
chr8	80477326	80477425	reg1027958.p1	4.322	+	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	-759727	-	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	-899055	+	NM_006823 NM_181839 S76965	-1049040	+	NM_001199214 NM_007029	45673	+	TSC_hg19_v1_chr8_+_80523304 D50375	45933	+	AK299500 TSC_hg19_v1_chr8_+_80523339	45964	+	J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7##NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_001199214|STMN2|11075|stathmin-like 2##NM_007029|STMN2|11075|stathmin-like 2##D50375|STMN2|11075|stathmin-like 2##AK299500|STMN2|11075|stathmin-like 2	0.0	
chr3	130771963	130772103	reg1034146.p1	4.321	+	AK297300 NM_001146003 NM_024800 NM_145910 AK123021 AL833472 AB071996 AB071997 BC026195 AK293261 AK316352	-26298	+	AK301388 BC069265 AK027806 NM_014065 AK294156	-26393	-	TSC_hg19_v1_chr3_+_130612841 AB037768 NM_001199179 NM_001001485 NM_001199183 NM_001199184 AF189723 AF225981 AK304175 BC028139 NM_001199185 NM_014382 AF181120 AF181121 AK314342 NM_001001486 NM_001001487 AY268374 AY268375	-158888	+	TSC_hg19_v1_chr3_+_131080714 AK297126	308665	+	TSC_hg19_v1_chr3_+_131080737 AK000532 BC015593	308710	+	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	328618	+	AK297300|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##NM_001146003|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##NM_024800|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##NM_145910|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK123021|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AL833472|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AB071996|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AB071997|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##BC026195|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK293261|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK316352|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK301388|ASTE1|28990|asteroid homolog 1 (Drosophila)##BC069265|ASTE1|28990|asteroid homolog 1 (Drosophila)##AK027806|ASTE1|28990|asteroid homolog 1 (Drosophila)##NM_014065|ASTE1|28990|asteroid homolog 1 (Drosophila)##AK294156|ASTE1|28990|asteroid homolog 1 (Drosophila)##AB037768|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199179|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001485|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199183|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199184|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF189723|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF225981|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK304175|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##BC028139|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199185|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_014382|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181120|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181121|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK314342|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001486|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001487|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268374|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268375|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK297126|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##AK000532|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##BC015593|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16	0.923853	CTCF.p2:18:0.924
chr6	86246859	86247026	reg1031458.p1	4.321	+	TSC_hg19_v1_chr6_+_86159827 AK314661 AX772810 X55740 BC015940 AK075008 BC065937 DQ186653	-87127	+	NM_001204813 NM_002526 TSC_hg19_v1_chr6_+_86159433	-87570	+	HQ258462 NM_001080508 BC157841 BC132715	-773017	-	BC046520 AY044865 CU686683 TSC_hg19_v1_chr6_-_86303440 BC095419	56451	-	TSC_hg19_v1_chr6_-_86303553 AK000362	56613	-	TSC_hg19_v1_chr6_-_86303574 AK295417 BC005110 BC068589 NM_020468 NM_153816	56690	-	AK314661|NT5E|4907|5'-nucleotidase, ecto (CD73)##X55740|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC015940|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK075008|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC065937|NT5E|4907|5'-nucleotidase, ecto (CD73)##DQ186653|NT5E|4907|5'-nucleotidase, ecto (CD73)##NM_001204813|NT5E|4907|5'-nucleotidase, ecto (CD73)##NM_002526|NT5E|4907|5'-nucleotidase, ecto (CD73)##HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18##BC046520|SNX14|57231|sorting nexin 14##AY044865|SNX14|57231|sorting nexin 14##BC095419|SNX14|57231|sorting nexin 14##AK000362|SNX14|57231|sorting nexin 14##AK295417|SNX14|57231|sorting nexin 14##BC005110|SNX14|57231|sorting nexin 14##BC068589|SNX14|57231|sorting nexin 14##NM_020468|SNX14|57231|sorting nexin 14##NM_153816|SNX14|57231|sorting nexin 14	0.817477	CTCF.p2:13:0.817
chr10	74635159	74635256	reg1033078.p1	4.320	+	TSC_hg19_v1_chr10_+_74451900 BC034235 NM_138357 AK075439 AK310455 AK311133 AK315519 AK301475 BC010682	-183323	+	TSC_hg19_v1_chr10_-_74385887 NM_001195518 NM_006077	-249290	-	TSC_hg19_v1_chr10_-_74385854 BC004190 BC004216	-249338	-	AK096435 NM_152635 BC126440 AY358339 AY013707 TSC_hg19_v1_chr10_+_74653529	18226	+	AF349540 BC093996 BC111946 BC143532 AY358032 NM_032562 AF339053 AK313712 TSC_hg19_v1_chr10_-_74714543	79304	-	AK311349 TSC_hg19_v1_chr10_-_74714574	79365	-	BC034235|MCU|90550|mitochondrial calcium uniporter##NM_138357|MCU|90550|mitochondrial calcium uniporter##AK075439|MCU|90550|mitochondrial calcium uniporter##AK310455|MCU|90550|mitochondrial calcium uniporter##AK311133|MCU|90550|mitochondrial calcium uniporter##AK315519|MCU|90550|mitochondrial calcium uniporter##AK301475|MCU|90550|mitochondrial calcium uniporter##BC010682|MCU|90550|mitochondrial calcium uniporter##NM_001195518|MICU1|10367|mitochondrial calcium uptake 1##NM_006077|MICU1|10367|mitochondrial calcium uptake 1##BC004190|MICU1|10367|mitochondrial calcium uptake 1##BC004216|MICU1|10367|mitochondrial calcium uptake 1##AK096435|OIT3|170392|oncoprotein induced transcript 3##NM_152635|OIT3|170392|oncoprotein induced transcript 3##BC126440|OIT3|170392|oncoprotein induced transcript 3##AY358339|OIT3|170392|oncoprotein induced transcript 3##AY013707|OIT3|170392|oncoprotein induced transcript 3##AF349540|PLA2G12B|84647|phospholipase A2, group XIIB##BC093996|PLA2G12B|84647|phospholipase A2, group XIIB##BC111946|PLA2G12B|84647|phospholipase A2, group XIIB##BC143532|PLA2G12B|84647|phospholipase A2, group XIIB##AY358032|PLA2G12B|84647|phospholipase A2, group XIIB##NM_032562|PLA2G12B|84647|phospholipase A2, group XIIB##AF339053|PLA2G12B|84647|phospholipase A2, group XIIB##AK313712|PLA2G12B|84647|phospholipase A2, group XIIB##AK311349|PLA2G12B|84647|phospholipase A2, group XIIB	0.821324	CTCF.p2:3:0.821
chr11	102665296	102665434	reg1038844.p1	4.320	+	BT007442 DQ891931 DQ895118 X07820 BC002591 AK222601 AK313960 NM_002425	-14026	-	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	-69712	-	AB527320 AF195192 AY358752 NM_022122	-88910	-	AB463107 BT006874 BT020147 DQ890729 DQ893904 AK223035 BC013875 M15996 TSC_hg19_v1_chr11_-_102668890 AK024818 AK098450 AK130687 AK223281 AK297723 X05231 M13509 X54925 AK301340	3491	-	TSC_hg19_v1_chr11_-_102668892 NM_001145938 NM_002421	3563	-	DQ399598 CU686970 J03209 X05232 BC074815 BC074869 BC105954 BC107490 BC107491 AK313310 AK223283 AK223291 TSC_hg19_v1_chr11_-_102714339 BC069676 BC069716 NM_002422	48931	-	BT007442|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ891931|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##DQ895118|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##X07820|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##BC002591|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##AK222601|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##AK313960|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##NM_002425|MMP10|4319|matrix metallopeptidase 10 (stromelysin 2)##BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##BT006874|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##BT020147|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##DQ890729|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##DQ893904|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK223035|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##BC013875|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##M15996|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK024818|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK098450|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK130687|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK223281|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK297723|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##X05231|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##M13509|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##X54925|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##AK301340|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##NM_001145938|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##NM_002421|MMP1|4312|matrix metallopeptidase 1 (interstitial collagenase)##DQ399598|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##J03209|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##X05232|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074815|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC074869|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC105954|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107490|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC107491|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK313310|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223283|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##AK223291|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069676|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##BC069716|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)##NM_002422|MMP3|4314|matrix metallopeptidase 3 (stromelysin 1, progelatinase)	0.991676	CTCF.p2:3:0.992
chr1	31194849	31194944	reg1032395.p1	4.320	+	TSC_hg19_v1_chr1_+_31191648 AK057725	-3265	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-1631848	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-1637449	-	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	1536	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	35736	-	TSC_hg19_v1_chr1_-_31230697 NM_006762	35794	-	AK057725|LOC100129196|100129196|uncharacterized LOC100129196##NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5##NM_006762|LAPTM5|7805|lysosomal protein transmembrane 5	0.097709	
chr2	111330375	111330501	reg1030611.p1	4.320	+	BC094740 NM_001205288 NM_033514	-99787	-	TSC_hg19_v1_chr2_-_110970123 BC031315	-360317	-	AJ001815 BC032939 TSC_hg19_v1_chr2_-_110962582 BX571745 NM_000272 NM_001128178 NM_001128179 NM_207181	-367831	-	NM_005054 U64675	4239	-	AL136868 NM_001037866 NM_001123363 NM_032260	5870	-	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	105205	-	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##BC031315|LINC00116|205251|long intergenic non-protein coding RNA 116##AJ001815|NPHP1|4867|nephronophthisis 1 (juvenile)##BC032939|NPHP1|4867|nephronophthisis 1 (juvenile)##BX571745|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_000272|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128178|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128179|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_207181|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)	0.578776	CTCF.p2:17:0.579
chr3	149303277	149303445	reg1029254.p1	4.320	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-110872	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-110959	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-207819	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	72374	-	AK022036 NM_001168278	117698	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	166878	-	AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2	0.0	
chr3	195380566	195380633	reg1006249.p1	4.320	+	TSC_hg19_v1_chr3_-_195310989 NM_001647	-69569	-	J02611 BC007402 TSC_hg19_v1_chr3_-_195310812 AK312090 AK294523	-69769	-	TSC_hg19_v1_chr3_-_195306274 BT019860 BT019861 CR456838 CR541773 CU675645 DQ892668 DQ896124	-74297	-	BC053551 TSC_hg19_v1_chr3_+_195384934 BC062438 AK299148 AK057553 AK316025	4330	+	TSC_hg19_v1_chr3_+_195384941 BC073879 AK300421 BC064564 AK074764	4355	+	TSC_hg19_v1_chr3_+_195447752 NM_152673 AK311504	67156	+	NM_001647|APOD|347|apolipoprotein D##J02611|APOD|347|apolipoprotein D##BC007402|APOD|347|apolipoprotein D##AK312090|APOD|347|apolipoprotein D##AK294523|APOD|347|apolipoprotein D##BT019860|APOD|347|apolipoprotein D##BT019861|APOD|347|apolipoprotein D##CR456838|APOD|347|apolipoprotein D##CR541773|APOD|347|apolipoprotein D##DQ892668|APOD|347|apolipoprotein D##DQ896124|APOD|347|apolipoprotein D##BC053551|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##BC062438|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK299148|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AK057553|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK316025|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##BC073879|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##BC064564|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK074764|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##NM_152673|MUC20|200958|mucin 20, cell surface associated##AK311504|MUC20|200958|mucin 20, cell surface associated	0.788607	
chr4	5721281	5721456	reg1032739.p2	4.320	+	TSC_hg19_v1_chr4_+_5712929 AF216184 AF216185 NM_153717 BC085608 AF239742	-8371	+	AY152402 AY152403 NM_001166136	-10094	-	AY185210 NM_147127 TSC_hg19_v1_chr4_-_5710299	-11068	-	AK091696 TSC_hg19_v1_chr4_-_5828628	107240	-	BT006806 CU674102 DQ892528 DQ895740 TSC_hg19_v1_chr4_-_5889997	168628	-	D78012 TSC_hg19_v1_chr4_-_5890210 AK127754 BC000252 BC007613 AK309379	168821	-	AF216184|EVC|2121|Ellis van Creveld syndrome##AF216185|EVC|2121|Ellis van Creveld syndrome##NM_153717|EVC|2121|Ellis van Creveld syndrome##BC085608|EVC|2121|Ellis van Creveld syndrome##AF239742|EVC|2121|Ellis van Creveld syndrome##AY152402|EVC2|132884|Ellis van Creveld syndrome 2##AY152403|EVC2|132884|Ellis van Creveld syndrome 2##NM_001166136|EVC2|132884|Ellis van Creveld syndrome 2##AY185210|EVC2|132884|Ellis van Creveld syndrome 2##NM_147127|EVC2|132884|Ellis van Creveld syndrome 2##AK091696|CRMP1|1400|collapsin response mediator protein 1##BT006806|CRMP1|1400|collapsin response mediator protein 1##DQ892528|CRMP1|1400|collapsin response mediator protein 1##DQ895740|CRMP1|1400|collapsin response mediator protein 1##D78012|CRMP1|1400|collapsin response mediator protein 1##AK127754|CRMP1|1400|collapsin response mediator protein 1##BC000252|CRMP1|1400|collapsin response mediator protein 1##BC007613|CRMP1|1400|collapsin response mediator protein 1##AK309379|CRMP1|1400|collapsin response mediator protein 1	0.78937	CTCF.p2:-8:0.789
chr4	74300211	74300320	reg1029703.p2	4.320	+	X51365 X51363 X51364 TSC_hg19_v1_chr4_+_74286879	-13403	+	TSC_hg19_v1_chr4_+_74281884 BC014308	-18320	+	HQ537426 TSC_hg19_v1_chr4_+_74270841	-29428	+	NM_001134 V01514 AK297669 TSC_hg19_v1_chr4_+_74301937 AK297674 AK314817 BC027881 DQ890942 DQ894103 CU693306	1690	+	AK290556 NM_001133 BC109020 BC109021 L35486	47205	+	AY217664 BC058835 NM_177532 AY217665 CR749283 AK126346 NM_201431	185954	-	X51365|ALB|213|albumin##X51363|ALB|213|albumin##X51364|ALB|213|albumin##BC014308|ALB|213|albumin##HQ537426|ALB|213|albumin##NM_001134|AFP|174|alpha-fetoprotein##V01514|AFP|174|alpha-fetoprotein##AK297669|AFP|174|alpha-fetoprotein##AK297674|AFP|174|alpha-fetoprotein##AK314817|AFP|174|alpha-fetoprotein##BC027881|AFP|174|alpha-fetoprotein##DQ890942|AFP|174|alpha-fetoprotein##DQ894103|AFP|174|alpha-fetoprotein##AK290556|AFM|173|afamin##NM_001133|AFM|173|afamin##BC109020|AFM|173|afamin##BC109021|AFM|173|afamin##L35486|AFM|173|afamin##AY217664|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##BC058835|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_177532|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AY217665|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##CR749283|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##AK126346|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6##NM_201431|RASSF6|166824|Ras association (RalGDS/AF-6) domain family member 6	0.0	
chr6	36954393	36954505	reg1030035.p2	4.320	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-179	-	AK022783 TSC_hg19_v1_chr6_-_36953950 AF176006 AF192559 BC125055 BC153873 NM_014341 BC110914	-472	-	TSC_hg19_v1_chr6_-_36953944 BC125056	-506	-	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	19052	+	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	183673	+	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	270937	-	AK315067|MTCH1|23787|mitochondrial carrier 1##AK022783|MTCH1|23787|mitochondrial carrier 1##AF176006|MTCH1|23787|mitochondrial carrier 1##AF192559|MTCH1|23787|mitochondrial carrier 1##BC125055|MTCH1|23787|mitochondrial carrier 1##BC153873|MTCH1|23787|mitochondrial carrier 1##NM_014341|MTCH1|23787|mitochondrial carrier 1##BC110914|MTCH1|23787|mitochondrial carrier 1##BC125056|MTCH1|23787|mitochondrial carrier 1##BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217	0.0	
chr1	16679013	16679118	reg1028518.p1	4.319	+	TSC_hg19_v1_chr1_-_16678969 BC063864 NM_018994 AK055598 BC043410	-117	-	TSC_hg19_v1_chr1_-_16678922 AK310671	-147	-	NM_030907	-115407	-	NM_001114600 NM_015609 BC023988 TSC_hg19_v1_chr1_+_16693726 BX640985 AJ295987 AB097042 AB097043 AB097046 AK297926 AK298576 AK308787 AL050028 AK316205 BC065538 AB097044 AB097045 BC010631	14606	+	AK128106 BC022039 AK311614 AY327405 NM_198546	84837	-	NM_001145277 NM_001145278 NM_018090 TSC_hg19_v1_chr1_+_16767200	88119	+	BC063864|FBXO42|54455|F-box protein 42##NM_018994|FBXO42|54455|F-box protein 42##AK055598|FBXO42|54455|F-box protein 42##BC043410|FBXO42|54455|F-box protein 42##AK310671|FBXO42|54455|F-box protein 42##NM_030907|RSG1|79363|REM2 and RAB-like small GTPase 1##NM_001114600|C1orf144|26099|chromosome 1 open reading frame 144##NM_015609|C1orf144|26099|chromosome 1 open reading frame 144##BC023988|C1orf144|26099|chromosome 1 open reading frame 144##BX640985|C1orf144|26099|chromosome 1 open reading frame 144##AJ295987|C1orf144|26099|chromosome 1 open reading frame 144##AB097042|C1orf144|26099|chromosome 1 open reading frame 144##AB097043|C1orf144|26099|chromosome 1 open reading frame 144##AB097046|C1orf144|26099|chromosome 1 open reading frame 144##AK297926|C1orf144|26099|chromosome 1 open reading frame 144##AK298576|C1orf144|26099|chromosome 1 open reading frame 144##AK308787|C1orf144|26099|chromosome 1 open reading frame 144##AL050028|C1orf144|26099|chromosome 1 open reading frame 144##AK316205|C1orf144|26099|chromosome 1 open reading frame 144##BC065538|C1orf144|26099|chromosome 1 open reading frame 144##AB097044|C1orf144|26099|chromosome 1 open reading frame 144##AB097045|C1orf144|26099|chromosome 1 open reading frame 144##BC010631|C1orf144|26099|chromosome 1 open reading frame 144##AK128106|SPATA21|374955|spermatogenesis associated 21##BC022039|SPATA21|374955|spermatogenesis associated 21##AK311614|SPATA21|374955|spermatogenesis associated 21##AY327405|SPATA21|374955|spermatogenesis associated 21##NM_198546|SPATA21|374955|spermatogenesis associated 21##NM_001145277|NECAP2|55707|NECAP endocytosis associated 2##NM_001145278|NECAP2|55707|NECAP endocytosis associated 2##NM_018090|NECAP2|55707|NECAP endocytosis associated 2	0.182144	
chr1	172307753	172307903	reg1026564.p2	4.319	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-497125	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-556990	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-557014	+	AL035295 NM_139240 BC038410	82000	+	TSC_hg19_v1_chr1_-_172413202 BC006539	105360	-	TSC_hg19_v1_chr1_-_172413207 AK308201	105379	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.0	
chr12	65515312	65515419	reg1029964.p2	4.319	+	TSC_hg19_v1_chr12_-_65515349 NM_007191	-15	-	AK301818 TSC_hg19_v1_chr12_-_65515286	-84	-	TSC_hg19_v1_chr12_-_65515107 AF122922 BC018037 AY358344	-280	-	TSC_hg19_v1_chr12_+_65563362 AK312473 NM_001167614 NM_014319 AK304317 AF112299	47989	+	NM_001031679 NM_001193460 NM_198080 TSC_hg19_v1_chr12_+_65672483 AK316365 AK293084 AK299065 AY358229 BX648776 AL833622 BC040053	157160	+	TSC_hg19_v1_chr12_+_65672705 NM_001193461	157359	+	NM_007191|WIF1|11197|WNT inhibitory factor 1##AK301818|WIF1|11197|WNT inhibitory factor 1##AF122922|WIF1|11197|WNT inhibitory factor 1##BC018037|WIF1|11197|WNT inhibitory factor 1##AY358344|WIF1|11197|WNT inhibitory factor 1##AK312473|LEMD3|23592|LEM domain containing 3##NM_001167614|LEMD3|23592|LEM domain containing 3##NM_014319|LEMD3|23592|LEM domain containing 3##AK304317|LEMD3|23592|LEM domain containing 3##AF112299|LEMD3|23592|LEM domain containing 3##NM_001031679|MSRB3|253827|methionine sulfoxide reductase B3##NM_001193460|MSRB3|253827|methionine sulfoxide reductase B3##NM_198080|MSRB3|253827|methionine sulfoxide reductase B3##AK316365|MSRB3|253827|methionine sulfoxide reductase B3##AK293084|MSRB3|253827|methionine sulfoxide reductase B3##AK299065|MSRB3|253827|methionine sulfoxide reductase B3##AY358229|MSRB3|253827|methionine sulfoxide reductase B3##BX648776|MSRB3|253827|methionine sulfoxide reductase B3##AL833622|MSRB3|253827|methionine sulfoxide reductase B3##BC040053|MSRB3|253827|methionine sulfoxide reductase B3##NM_001193461|MSRB3|253827|methionine sulfoxide reductase B3	0.969108	CTCF.p2:7:0.969
chr12	88260618	88260739	reg1033576.p1	4.319	+	BC035851 NM_013244	-1028021	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	-1992552	+	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	-2030441	-	AL833338 BC062424 AK093140 AX747948 NM_152589	162482	-	TSC_hg19_v1_chr12_+_88429312 AK095477 NM_001009894 CR936776 AK311222 BC058014 BX640968 BX537868 BX648026 AK311153 BC035136 BC092422 AB590923 AM392924 AL137488	168708	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	275191	-	BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AL833338|C12orf50|160419|chromosome 12 open reading frame 50##BC062424|C12orf50|160419|chromosome 12 open reading frame 50##AK093140|C12orf50|160419|chromosome 12 open reading frame 50##NM_152589|C12orf50|160419|chromosome 12 open reading frame 50##AK095477|C12orf29|91298|chromosome 12 open reading frame 29##NM_001009894|C12orf29|91298|chromosome 12 open reading frame 29##CR936776|C12orf29|91298|chromosome 12 open reading frame 29##AK311222|C12orf29|91298|chromosome 12 open reading frame 29##BC058014|C12orf29|91298|chromosome 12 open reading frame 29##BX640968|C12orf29|91298|chromosome 12 open reading frame 29##BX537868|C12orf29|91298|chromosome 12 open reading frame 29##BX648026|C12orf29|91298|chromosome 12 open reading frame 29##AK311153|C12orf29|91298|chromosome 12 open reading frame 29##BC035136|C12orf29|91298|chromosome 12 open reading frame 29##BC092422|C12orf29|91298|chromosome 12 open reading frame 29##AM392924|C12orf29|91298|chromosome 12 open reading frame 29##AL137488|C12orf29|91298|chromosome 12 open reading frame 29##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa	0.355662	CTCF.p2:-23:0.356
chr12	90103511	90103691	reg1030983.p3	4.319	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-56	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-914	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-53750	-	BC026075 BC024183 BC027600 BC034491 NM_152638	1245350	-	U59111 TSC_hg19_v1_chr12_-_91398750	1295146	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	1295178	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.0	
chr15	81702762	81702877	reg1033499.p1	4.319	+	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	-36334	-	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	-86325	-	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	-113515	+	AK094145 TSC_hg19_v1_chr15_-_82336883	634064	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	635547	-	AB095929 BC111545 BC036211 TSC_hg19_v1_chr15_-_82338485	635657	-	NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3##AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)##AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)##BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)##BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)	0.985027	CTCF.p2:-10:0.985
chr16	29647872	29647968	reg1030604.p1	4.319	+	AB040413 AB055226 TSC_hg19_v1_chr16_-_29625045	-22878	-	TSC_hg19_v1_chr16_-_29606667 AK316536	-41247	-	CU687812 AK304513 TSC_hg19_v1_chr16_-_29606405	-41575	-	TSC_hg19_v1_chr16_+_29674283 NM_001030288 X60502 BC012350	26412	+	TSC_hg19_v1_chr16_+_29674567 AK292626 AK313750	26645	+	TSC_hg19_v1_chr16_+_29674568 J04168 J04536 NM_003123	26653	+	AK304513|LOC440354|440354|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene##NM_001030288|SPN|6693|sialophorin##X60502|SPN|6693|sialophorin##BC012350|SPN|6693|sialophorin##AK292626|SPN|6693|sialophorin##AK313750|SPN|6693|sialophorin##J04536|SPN|6693|sialophorin##NM_003123|SPN|6693|sialophorin	0.72839	CTCF.p2:-10:0.728
chr21	45284207	45284296	reg1025619.p2	4.319	+	TSC_hg19_v1_chr21_+_45209457 AK223185 AK303000 AK223215 AK313116 BC000380 U79775 CU674182 DQ891391 DQ894567 BC014787	-74766	+	TSC_hg19_v1_chr21_+_45209429 NM_003683	-74836	+	TSC_hg19_v1_chr21_-_45196227 BC010532 L03558 NM_000100	-88022	-	TSC_hg19_v1_chr21_+_45285029 AY358704	809	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	872	+	AK300562 NM_001037553	61027	+	AK223185|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK303000|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK223215|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK313116|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC000380|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##U79775|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ891391|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ894567|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC014787|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##NM_003683|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC010532|CSTB|1476|cystatin B (stefin B)##L03558|CSTB|1476|cystatin B (stefin B)##NM_000100|CSTB|1476|cystatin B (stefin B)##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3	0.0	
chr22	37546166	37546338	reg1029181.p2	4.319	+	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	-300	-	CR456446 TSC_hg19_v1_chr22_-_37505748	-40574	-	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	-46677	-	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	38039	-	BC042068 NM_001051 AK291165	62131	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	93969	-	BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##CR456446|TMPRSS6|164656|transmembrane protease, serine 6##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)	0.0	
chr7	129465482	129465662	reg1016889.p2	4.319	+	L22454 NM_001040110	-195655	+	AK293351 TSC_hg19_v1_chr7_+_129251621 BC016925 AK290891	-213960	+	TSC_hg19_v1_chr7_+_129251531 NM_005011	-214031	+	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	127179	-	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	127237	-	TSC_hg19_v1_chr7_-_129691215 BC000190 AB463378 AJ537494 AM393415 CU679956 BC011551 AF151050 AK001317 AK022373 NM_016478	225649	-	L22454|NRF1|4899|nuclear respiratory factor 1##NM_001040110|NRF1|4899|nuclear respiratory factor 1##AK293351|NRF1|4899|nuclear respiratory factor 1##BC016925|NRF1|4899|nuclear respiratory factor 1##AK290891|NRF1|4899|nuclear respiratory factor 1##NM_005011|NRF1|4899|nuclear respiratory factor 1##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC000190|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AJ537494|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AM393415|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC011551|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AF151050|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK001317|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK022373|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_016478|ZC3HC1|51530|zinc finger, C3HC-type containing 1	0.0	
chr7	38407857	38407960	reg1024144.p1	4.319	+	TSC_hg19_v1_chr7_-_38389583 BC035592	-18319	-	Y00482 TSC_hg19_v1_chr7_-_38389512	-18432	-	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	-32704	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	263054	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	263169	-	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	540885	-	BC035592|TRGV5|6978|T cell receptor gamma variable 5##BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)	0.993282	CTCF.p2:16:0.993
chr8	130694280	130694364	reg1005959.p1	4.319	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1887539	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1945832	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1945997	+	AB042405 NM_031415	104811	-	BC003599 TSC_hg19_v1_chr8_-_130951934	257593	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	257684	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.016292	
chr9	129933095	129933275	reg1031930.p2	4.319	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-48155	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-48223	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-48277	-	NM_032293 AK293732 AK095679	93622	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	226261	+	TSC_hg19_v1_chr9_-_130186602 AK124330	253381	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.256191	CTCF.p2:84:0.256
chr1	156093281	156093372	reg1030813.p2	4.318	+	TSC_hg19_v1_chr1_+_156084585 AY528714 AB527090 EU831758 EU831836 EU832167 EU832261 CU677029 CU678414 AY847595 AY847596 AY847597	-8682	+	TSC_hg19_v1_chr1_+_156084568 M13451	-8756	+	TSC_hg19_v1_chr1_+_156084553 BC003162 AK130179	-8775	+	NM_001193301 AY358531	26445	+	NM_001193300 NM_022367 AK296693 TSC_hg19_v1_chr1_+_156123375 AK091127 AK290353 AX746794 NM_001193302 AK315547 BX640891 BC020974	30028	+	TSC_hg19_v1_chr1_+_156163725 NM_014655	70412	+	AY528714|LMNA|4000|lamin A/C##EU831758|LMNA|4000|lamin A/C##EU831836|LMNA|4000|lamin A/C##EU832167|LMNA|4000|lamin A/C##EU832261|LMNA|4000|lamin A/C##AY847595|LMNA|4000|lamin A/C##AY847596|LMNA|4000|lamin A/C##AY847597|LMNA|4000|lamin A/C##M13451|LMNA|4000|lamin A/C##BC003162|LMNA|4000|lamin A/C##AK130179|LMNA|4000|lamin A/C##NM_001193301|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AY358531|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_001193300|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_022367|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK296693|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK091127|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK290353|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_001193302|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK315547|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##BX640891|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##BC020974|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_014655|SLC25A44|9673|solute carrier family 25, member 44	0.942967	CTCF.p2:37:0.943
chr13	101241018	101241137	reg1031464.p1	4.318	+	TSC_hg19_v1_chr13_-_101241029 AK095850 NM_001195087	-50	-	AK091974 BC001077 BC004360 NM_033110	-55078	-	NM_000282 NM_001127692 NM_001178004 TSC_hg19_v1_chr13_+_100741349 AF385926 AK298318 AK225288 AK225299 AK296771 AK315503 BC000140 X14608	-499718	+	AK299859 TSC_hg19_v1_chr13_-_101327050 BX648008 AK056409 AK290345 BX647956	85979	-	NM_001079669 NM_032813 TSC_hg19_v1_chr13_-_101327108	86032	-	AY141972 AK094669 BC012128 NM_052867 TSC_hg19_v1_chr13_-_102068817	827684	-	AK095850|A2LD1|87769|AIG2-like domain 1##NM_001195087|A2LD1|87769|AIG2-like domain 1##AK091974|A2LD1|87769|AIG2-like domain 1##BC001077|A2LD1|87769|AIG2-like domain 1##BC004360|A2LD1|87769|AIG2-like domain 1##NM_033110|A2LD1|87769|AIG2-like domain 1##NM_000282|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##NM_001127692|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##NM_001178004|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AF385926|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK298318|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK225288|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK225299|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK296771|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK315503|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##BC000140|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##X14608|PCCA|5095|propionyl CoA carboxylase, alpha polypeptide##AK299859|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX648008|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK056409|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AK290345|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##BX647956|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##NM_001079669|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##NM_032813|TMTC4|84899|transmembrane and tetratricopeptide repeat containing 4##AY141972|NALCN|259232|sodium leak channel, non-selective##AK094669|NALCN|259232|sodium leak channel, non-selective##BC012128|NALCN|259232|sodium leak channel, non-selective##NM_052867|NALCN|259232|sodium leak channel, non-selective	0.995605	CTCF.p2:15:0.996
chr14	77428149	77428329	reg1020960.p1	4.318	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-135444	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-148977	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-149029	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	66445	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	66821	-	AK124327 TSC_hg19_v1_chr14_-_77542533	114294	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.020773	
chr16	12714156	12714271	reg1031652.p2	4.318	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-643640	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-655129	+	NM_001130007	-703695	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	183438	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	183506	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	281255	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.012336	
chr2	37899871	37899989	reg1023381.p2	4.318	+	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	-541	-	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	-1151	-	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-328117	+	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	252502	+	BC024243 NM_001170792	255971	+	NM_001170793 NM_144713 AK057516 AF435956	277670	+	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1##BC024243|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1	0.0	
chr5	132596564	132596648	reg1031701.p1	4.318	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-163715	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-168203	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-190503	+	TSC_hg19_v1_chr5_-_132948202 AK055684	351593	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	351632	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	707769	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.013357	
chr9	130629025	130629112	reg1030700.p2	4.318	+	TSC_hg19_v1_chr9_-_130617036 NM_000118 NM_001114753	-12041	-	TSC_hg19_v1_chr9_-_130616968 AK222669 AK302455	-12093	-	TSC_hg19_v1_chr9_-_130616938 BC014271 BC020391 X72012 AK290389 AK300156	-12212	-	BC001116 BC036803 AK313758 TSC_hg19_v1_chr9_-_130639955 BC100022 NM_000476	10912	-	AK300534 TSC_hg19_v1_chr9_-_130659688 AK057100	30560	-	TSC_hg19_v1_chr9_-_130661803 AK226174	32731	-	NM_000118|ENG|2022|endoglin##NM_001114753|ENG|2022|endoglin##AK222669|ENG|2022|endoglin##AK302455|ENG|2022|endoglin##BC014271|ENG|2022|endoglin##BC020391|ENG|2022|endoglin##X72012|ENG|2022|endoglin##AK290389|ENG|2022|endoglin##AK300156|ENG|2022|endoglin##BC001116|AK1|203|adenylate kinase 1##BC036803|AK1|203|adenylate kinase 1##AK313758|AK1|203|adenylate kinase 1##BC100022|AK1|203|adenylate kinase 1##NM_000476|AK1|203|adenylate kinase 1##AK300534|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK057100|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK226174|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	0.0	
chrX	128893842	128893993	reg1033828.p2	4.318	+	AK300954 U90724 NM_003399 BC126174 BC143901	-20941	+	BC021104 NM_017413	-104995	-	TSC_hg19_v1_chrX_+_128674247 AK226116 BC094726 NM_000276 NM_001587 U57627 AK293107 BC130612 BC144106 BC025253 AB384825	-219619	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	19970	+	TSC_hg19_v1_chrX_+_128913898 AK314869 AK292023 BC051881 AL049683 AB528892	20067	+	AK001524 BC000035 AB209807 TSC_hg19_v1_chrX_-_128977481 NM_001008222	83508	-	AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC021104|APLN|8862|apelin##NM_017413|APLN|8862|apelin##AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe##U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe##AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3##AK314869|SASH3|54440|SAM and SH3 domain containing 3##AK292023|SASH3|54440|SAM and SH3 domain containing 3##BC051881|SASH3|54440|SAM and SH3 domain containing 3##AL049683|SASH3|54440|SAM and SH3 domain containing 3##AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9	1.007801	CTCF.p2:-40:0.891
chr11	27723144	27723248	reg1030578.p2	4.317	+	AB038672 AY054397 BC029795 EF674521 NM_170733	-76	-	EF689011 EF689012 EF689019 EF689020 NM_001143808 NM_001143809 NM_001143810 NM_001143811	-597	-	EF689013 NM_001143812	-750	-	AY054396 EF674520 NM_001143807	18046	-	AB038671 AY054393 AY054394 AY054395 EF674517 EF674518 EF674519 NM_001143805 NM_001143806 NM_170732	19078	-	EF689021 NM_170731	20408	-	AB038672|BDNF|627|brain-derived neurotrophic factor##AY054397|BDNF|627|brain-derived neurotrophic factor##BC029795|BDNF|627|brain-derived neurotrophic factor##EF674521|BDNF|627|brain-derived neurotrophic factor##NM_170733|BDNF|627|brain-derived neurotrophic factor##EF689011|BDNF|627|brain-derived neurotrophic factor##EF689012|BDNF|627|brain-derived neurotrophic factor##EF689019|BDNF|627|brain-derived neurotrophic factor##EF689020|BDNF|627|brain-derived neurotrophic factor##NM_001143808|BDNF|627|brain-derived neurotrophic factor##NM_001143809|BDNF|627|brain-derived neurotrophic factor##NM_001143810|BDNF|627|brain-derived neurotrophic factor##NM_001143811|BDNF|627|brain-derived neurotrophic factor##EF689013|BDNF|627|brain-derived neurotrophic factor##NM_001143812|BDNF|627|brain-derived neurotrophic factor##AY054396|BDNF|627|brain-derived neurotrophic factor##EF674520|BDNF|627|brain-derived neurotrophic factor##NM_001143807|BDNF|627|brain-derived neurotrophic factor##AB038671|BDNF|627|brain-derived neurotrophic factor##AY054393|BDNF|627|brain-derived neurotrophic factor##AY054394|BDNF|627|brain-derived neurotrophic factor##AY054395|BDNF|627|brain-derived neurotrophic factor##EF674517|BDNF|627|brain-derived neurotrophic factor##EF674518|BDNF|627|brain-derived neurotrophic factor##EF674519|BDNF|627|brain-derived neurotrophic factor##NM_001143805|BDNF|627|brain-derived neurotrophic factor##NM_001143806|BDNF|627|brain-derived neurotrophic factor##NM_170732|BDNF|627|brain-derived neurotrophic factor##EF689021|BDNF|627|brain-derived neurotrophic factor##NM_170731|BDNF|627|brain-derived neurotrophic factor	0.521422	CTCF.p2:-3:0.521
chr13	29004153	29004334	reg1032334.p2	4.317	+	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	-291577	+	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	-329556	-	NM_001105577	-441470	-	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	65001	-	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	228965	+	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	229051	+	AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##NM_001105577|PRHOXNB|646625|parahox cluster neighbor##BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein	0.0	
chr16	85768999	85769108	reg1032625.p2	4.317	+	BC003186 NM_016095 TSC_hg19_v1_chr16_-_85722590	-46454	-	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	-46511	-	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	-122100	+	TSC_hg19_v1_chr16_-_85784703 NM_206967	15635	-	BT007132 CU675661 AF005888 TSC_hg19_v1_chr16_-_85833151 BC007445 BC001472 BC005886 BC020250 AK313977 NM_001142288 NM_006067	63988	-	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	64180	+	BC003186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_016095|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##NM_206967|C16orf74|404550|chromosome 16 open reading frame 74##BT007132|COX4NB|10328|COX4 neighbor##AF005888|COX4NB|10328|COX4 neighbor##BC007445|COX4NB|10328|COX4 neighbor##BC001472|COX4NB|10328|COX4 neighbor##BC005886|COX4NB|10328|COX4 neighbor##BC020250|COX4NB|10328|COX4 neighbor##AK313977|COX4NB|10328|COX4 neighbor##NM_001142288|COX4NB|10328|COX4 neighbor##NM_006067|COX4NB|10328|COX4 neighbor##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1	0.0	
chr2	231467563	231467744	reg1031206.p2	4.317	+	AK091898 NM_001206704	-186183	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-186697	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-186734	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	109893	+	TSC_hg19_v1_chr2_+_231577633 BC020570	109991	+	AK292382 NM_001130849 NM_001130850 AK315692	110625	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.0	
chr2	231523930	231524104	reg1033140.p2	4.317	+	AK091898 NM_001206704	-242547	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-243061	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-243098	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	53529	+	TSC_hg19_v1_chr2_+_231577633 BC020570	53627	+	AK292382 NM_001130849 NM_001130850 AK315692	54261	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.014252	
chr2	61959997	61960168	reg1034262.p1	4.317	+	TSC_hg19_v1_chr2_-_61765394 BX647758 NM_003400	-194677	-	TSC_hg19_v1_chr2_-_61765383 BC032847 CR749840	-194703	-	TSC_hg19_v1_chr2_-_61765358 AL833550	-194727	-	BC107162 BC107163 AK310908 AB527366 AM392542 AM392832 AM393518 TSC_hg19_v1_chr2_-_62081180 BX648834 BX649029 AK023367 BC036448 NM_001201543 NM_032180	121081	-	U38846 EU446763 AB385091 TSC_hg19_v1_chr2_-_62115685 AK294665	155582	-	AK129860 TSC_hg19_v1_chr2_-_62115719 AK295330	155636	-	BX647758|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##NM_003400|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC032847|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##CR749840|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##AL833550|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC107162|FAM161A|84140|family with sequence similarity 161, member A##BC107163|FAM161A|84140|family with sequence similarity 161, member A##AK310908|FAM161A|84140|family with sequence similarity 161, member A##AM392542|FAM161A|84140|family with sequence similarity 161, member A##AM392832|FAM161A|84140|family with sequence similarity 161, member A##AM393518|FAM161A|84140|family with sequence similarity 161, member A##BX648834|FAM161A|84140|family with sequence similarity 161, member A##BX649029|FAM161A|84140|family with sequence similarity 161, member A##AK023367|FAM161A|84140|family with sequence similarity 161, member A##BC036448|FAM161A|84140|family with sequence similarity 161, member A##NM_001201543|FAM161A|84140|family with sequence similarity 161, member A##NM_032180|FAM161A|84140|family with sequence similarity 161, member A##U38846|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##EU446763|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK294665|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK129860|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK295330|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)	0.0	
chr5	142602242	142602355	reg1034133.p1	4.317	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-451990	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-452326	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-524727	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	180525	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	180808	-	BC015610 TSC_hg19_v1_chr5_-_142783214	180913	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr5	159933667	159933841	reg1029207.p1	4.317	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-84851	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-84900	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-87649	-	AK025130 TSC_hg19_v1_chr5_-_160112393	178585	-	AB018258 AK295081 AK090832 AX746642 NM_025153	345377	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	1041372	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.0	
chr7	137291002	137291128	reg1025663.p1	4.317	+	BC005916 TSC_hg19_v1_chr7_-_137028543 NM_002825 M57399	-262510	-	X52946 TSC_hg19_v1_chr7_-_137028443 AK313424	-262624	-	TSC_hg19_v1_chr7_-_137028371 AK290488	-262692	-	TSC_hg19_v1_chr7_-_137531587 NM_004717	240531	-	TSC_hg19_v1_chr7_+_137531690 BC047556	240667	+	TSC_hg19_v1_chr7_-_137620668 BC015585	329597	-	BC005916|PTN|5764|pleiotrophin##NM_002825|PTN|5764|pleiotrophin##M57399|PTN|5764|pleiotrophin##X52946|PTN|5764|pleiotrophin##AK313424|PTN|5764|pleiotrophin##AK290488|PTN|5764|pleiotrophin##NM_004717|DGKI|9162|diacylglycerol kinase, iota##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.998328	CTCF.p2:-61:0.998
chrX	7089100	7089197	reg1029433.p2	4.317	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	-22956	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	-23197	+	AF167078 AF167079 NM_016379	-635990	-	NM_000351 M16505 J04964 AK314034	48353	+	AF167081 NM_013452	721154	+	AK289888 U03886 NM_004650 BC020746	806302	-	M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S##AF167081|VCX|26609|variable charge, X-linked##NM_013452|VCX|26609|variable charge, X-linked##AK289888|PNPLA4|8228|patatin-like phospholipase domain containing 4##U03886|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_004650|PNPLA4|8228|patatin-like phospholipase domain containing 4##BC020746|PNPLA4|8228|patatin-like phospholipase domain containing 4	0.879923	CTCF.p2:26:0.880
chr1	21543474	21543574	reg1031482.p1	4.316	+	TSC_hg19_v1_chr1_-_21503387 NM_001198801 NM_001198802	-40154	-	TSC_hg19_v1_chr1_-_21503344 BC072413 AB209119	-40200	-	BC030578 NM_001198803	-42285	-	D43698 TSC_hg19_v1_chr1_-_21606025 BX648351 NM_001113347	62559	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	73184	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	73410	-	NM_001198801|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198802|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC072413|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##AB209119|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##BC030578|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##NM_001198803|EIF4G3|8672|eukaryotic translation initiation factor 4 gamma, 3##D43698|ECE1|1889|endothelin converting enzyme 1##BX648351|ECE1|1889|endothelin converting enzyme 1##NM_001113347|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1	0.991186	CTCF.p2:16:0.991
chr12	27677243	27677379	reg1037138.p1	4.316	+	NM_001198915 NM_001198916 NM_003622 NM_177444 TSC_hg19_v1_chr12_+_27677138 BC022873 BC001560 AK294267 AB033056 BC050281 AB049149 AK314350 AF034802 BC046159	-176	+	NM_001145010	-57569	+	BC043511 TSC_hg19_v1_chr12_-_27599649	-77707	-	NM_001029874 BC140921 AY662682	172152	+	NM_001190864 NM_021821 TSC_hg19_v1_chr12_+_27863756 AF182422	186421	+	TSC_hg19_v1_chr12_+_27863764 BC015862 AK075378 AK075515 BC109372 BC063515 BC028346	186463	+	NM_001198915|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_001198916|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_003622|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_177444|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC022873|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC001560|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK294267|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB033056|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC050281|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AB049149|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AK314350|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##AF034802|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##BC046159|PPFIBP1|8496|PTPRF interacting protein, binding protein 1 (liprin beta 1)##NM_001145010|C12orf70|341346|chromosome 12 open reading frame 70##BC043511|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001029874|REP15|387849|RAB15 effector protein##BC140921|REP15|387849|RAB15 effector protein##AY662682|REP15|387849|RAB15 effector protein##NM_001190864|MRPS35|60488|mitochondrial ribosomal protein S35##NM_021821|MRPS35|60488|mitochondrial ribosomal protein S35##AF182422|MRPS35|60488|mitochondrial ribosomal protein S35##BC015862|MRPS35|60488|mitochondrial ribosomal protein S35##AK075378|MRPS35|60488|mitochondrial ribosomal protein S35##AK075515|MRPS35|60488|mitochondrial ribosomal protein S35##BC109372|MRPS35|60488|mitochondrial ribosomal protein S35##BC063515|MRPS35|60488|mitochondrial ribosomal protein S35##BC028346|MRPS35|60488|mitochondrial ribosomal protein S35	0.0	
chr13	33002607	33002681	reg1033812.p1	4.316	+	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	-286	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	-113027	+	BC146956 BC146965 NM_001136571	-116555	-	Z36834 TSC_hg19_v1_chr13_-_33112933 BC010643 U50532 AL049783 AK298546 AK312924 NM_014887 NM_033111	110281	-	TSC_hg19_v1_chr13_+_33160588 NM_015032	157919	+	TSC_hg19_v1_chr13_+_33160610 AL137201	157974	+	BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##Z36834|N4BP2L2|10443|NEDD4 binding protein 2-like 2##BC010643|N4BP2L2|10443|NEDD4 binding protein 2-like 2##U50532|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AL049783|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK298546|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK312924|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_014887|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_033111|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_015032|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.0	
chr13	74862167	74862267	reg1035534.p1	4.316	+	TSC_hg19_v1_chr13_-_74708425 AK291397	-153821	-	AF161471 AF113122 NM_007249	-154228	-	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-1229013	+	CR749622 TSC_hg19_v1_chr13_-_75901948	1039705	-	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	1194121	-	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	1249761	-	AK291397|KLF12|11278|Kruppel-like factor 12##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##CR749622|TBC1D4|9882|TBC1 domain family, member 4##AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6	0.0	
chr14	22446558	22446654	reg1031558.p2	4.316	+	AB463964 NM_001001912 AY726598	-313284	+	NM_001005466 AB529274 BC137371 BC137382	-343560	-	AB528817 NM_001005465	-407732	-	X58763 TSC_hg19_v1_chr14_+_22989364	542743	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	611480	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	611528	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.981565	CTCF.p2:9:0.982
chr2	162107505	162107605	reg1031450.p1	4.316	+	TSC_hg19_v1_chr2_+_162016938 AK313096 NM_001199135 BC067779	-90606	+	NM_004180 NM_133484 U59863 U63830	-114090	+	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	-757238	-	NM_005805 TSC_hg19_v1_chr2_+_162164936 BC066336	57307	+	TSC_hg19_v1_chr2_+_162164996 U86782	57468	+	NM_006593 BC104844 BC113418 TSC_hg19_v1_chr2_+_162272726	165126	+	AK313096|TANK|10010|TRAF family member-associated NFKB activator##NM_001199135|TANK|10010|TRAF family member-associated NFKB activator##BC067779|TANK|10010|TRAF family member-associated NFKB activator##NM_004180|TANK|10010|TRAF family member-associated NFKB activator##NM_133484|TANK|10010|TRAF family member-associated NFKB activator##U59863|TANK|10010|TRAF family member-associated NFKB activator##U63830|TANK|10010|TRAF family member-associated NFKB activator##BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_005805|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##BC066336|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##U86782|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##NM_006593|TBR1|10716|T-box, brain, 1##BC104844|TBR1|10716|T-box, brain, 1##BC113418|TBR1|10716|T-box, brain, 1	0.941404	CTCF.p2:-12:0.941
chr22	36027786	36027916	reg1034280.p1	4.316	+	TSC_hg19_v1_chr22_-_36019368 NM_203377	-8470	-	CR541949 CU013116 CU013404 DQ893679 DQ896050 AB528844 CR456516 TSC_hg19_v1_chr22_-_36013480 AK300657 BC014547 NM_005368 AK314057 NM_203378	-14423	-	BC013419 NM_014310 CR456477	-90458	+	TSC_hg19_v1_chr22_+_36044432 AY014879 NM_030641 BC047864 AX775805 AL834420 AK095881	16585	+	TSC_hg19_v1_chr22_+_36044482 BC038950 AY358210	16649	+	AB528803 AY014878 NM_030642	86066	+	NM_203377|MB|4151|myoglobin##CR541949|MB|4151|myoglobin##CU013116|MB|4151|myoglobin##CU013404|MB|4151|myoglobin##DQ893679|MB|4151|myoglobin##DQ896050|MB|4151|myoglobin##CR456516|MB|4151|myoglobin##AK300657|MB|4151|myoglobin##BC014547|MB|4151|myoglobin##NM_005368|MB|4151|myoglobin##AK314057|MB|4151|myoglobin##NM_203378|MB|4151|myoglobin##BC013419|RASD2|23551|RASD family, member 2##NM_014310|RASD2|23551|RASD family, member 2##CR456477|RASD2|23551|RASD family, member 2##AY014879|APOL6|80830|apolipoprotein L, 6##NM_030641|APOL6|80830|apolipoprotein L, 6##BC047864|APOL6|80830|apolipoprotein L, 6##AL834420|APOL6|80830|apolipoprotein L, 6##AK095881|APOL6|80830|apolipoprotein L, 6##BC038950|APOL6|80830|apolipoprotein L, 6##AY358210|APOL6|80830|apolipoprotein L, 6##AY014878|APOL5|80831|apolipoprotein L, 5##NM_030642|APOL5|80831|apolipoprotein L, 5	0.0	
chr4	55707298	55707403	reg1023502.p2	4.316	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	-183216	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-611886	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-612070	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	284404	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	505066	+	TSC_hg19_v1_chr4_+_56212475 CU677982 CR457312	505134	+	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3##CR457312|SRD5A3|79644|steroid 5 alpha-reductase 3	0.78114	CTCF.p2:0:0.781
chr5	170700438	170700535	reg1028401.p1	4.316	+	TSC_hg19_v1_chr5_+_170289029 AJ271459 AJ288952 AJ288953 AJ288954 AJ288955 BC030953 AF222747 AB527205 AL832980	-411464	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	-411555	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	-489732	+	BC017291 NM_021025 DQ892654 DQ895893 DQ896085	35842	+	NM_001037738 NM_002520 NM_199185 TSC_hg19_v1_chr5_+_170814855 D28343 AK290652 BC008495 BC107754 BC012566 BC021668 DQ303464 BC016716 BC016768 BC016824 BC021983 BC014349 BC002398 M23613 M26697 BC020467 BC050628 M28699 AY740634 AY740635 AY740636 AY740637 AY740638 AY740639 AY740640 BC063542	114311	+	AB042278 AB451236 AB451361 AB463949 BT007011 CU676967 CU677717 CU680364 CU692436 DQ892032 DQ895223 EF429251 X16934 TSC_hg19_v1_chr5_+_170815031	114505	+	AJ271459|RANBP17|64901|RAN binding protein 17##AJ288952|RANBP17|64901|RAN binding protein 17##AJ288953|RANBP17|64901|RAN binding protein 17##AJ288954|RANBP17|64901|RAN binding protein 17##AJ288955|RANBP17|64901|RAN binding protein 17##BC030953|RANBP17|64901|RAN binding protein 17##AF222747|RANBP17|64901|RAN binding protein 17##AL832980|RANBP17|64901|RAN binding protein 17##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17##AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC017291|TLX3|30012|T-cell leukemia homeobox 3##NM_021025|TLX3|30012|T-cell leukemia homeobox 3##DQ892654|TLX3|30012|T-cell leukemia homeobox 3##DQ895893|TLX3|30012|T-cell leukemia homeobox 3##DQ896085|TLX3|30012|T-cell leukemia homeobox 3##NM_001037738|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##NM_002520|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##NM_199185|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##D28343|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AK290652|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC008495|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC107754|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC012566|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC021668|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ303464|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016716|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016768|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC016824|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC021983|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC014349|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC002398|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M23613|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M26697|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC020467|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BC050628|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##M28699|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740634|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740635|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740636|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740637|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740638|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740639|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AY740640|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB042278|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451236|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451361|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BT007011|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ892032|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ895223|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##EF429251|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##X16934|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)	0.048847	
chr5	1793024	1793205	reg1027868.p2	4.316	+	TSC_hg19_v1_chr5_-_1634100 BC019918 BC045555 AK311210 AK311251	-158996	-	TSC_hg19_v1_chr5_-_1634097 BC020552 BC053586 BC044220 AK308990 AK315872 BC067863 BC014604 AK307076	-159045	-	TSC_hg19_v1_chr5_-_1594617 BC150558	-198483	-	TSC_hg19_v1_chr5_-_1799926 AB049654 AF151109 AF155653 BC020642	6809	-	TSC_hg19_v1_chr5_-_1799952 AK312001 BC104652 EF036487 NM_032479	6858	-	TSC_hg19_v1_chr5_+_1801520 NM_004553 AK022503 BC038664 AF044959 BC046155 CR456880 HQ257915	8398	+	BC019918|LOC728613|728613|programmed cell death 6 pseudogene##BC045555|LOC728613|728613|programmed cell death 6 pseudogene##AK311210|LOC728613|728613|programmed cell death 6 pseudogene##BC020552|LOC728613|728613|programmed cell death 6 pseudogene##BC053586|LOC728613|728613|programmed cell death 6 pseudogene##BC044220|LOC728613|728613|programmed cell death 6 pseudogene##AK308990|LOC728613|728613|programmed cell death 6 pseudogene##BC067863|LOC728613|728613|programmed cell death 6 pseudogene##BC014604|LOC728613|728613|programmed cell death 6 pseudogene##AK307076|LOC728613|728613|programmed cell death 6 pseudogene##BC150558|SDHAP3|728609|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3##AB049654|MRPL36|64979|mitochondrial ribosomal protein L36##AF151109|MRPL36|64979|mitochondrial ribosomal protein L36##AF155653|MRPL36|64979|mitochondrial ribosomal protein L36##BC020642|MRPL36|64979|mitochondrial ribosomal protein L36##AK312001|MRPL36|64979|mitochondrial ribosomal protein L36##BC104652|MRPL36|64979|mitochondrial ribosomal protein L36##EF036487|MRPL36|64979|mitochondrial ribosomal protein L36##NM_032479|MRPL36|64979|mitochondrial ribosomal protein L36##NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	0.0	
chr11	1939838	1939916	reg1016019.p1	4.315	+	NM_001013254 NM_001013255	-47752	+	NM_001013253	-49975	+	AK092071 AX747343 NM_001242932	-53483	+	NM_001042780 NM_001042781 NM_001042782 NM_006757 BC062430 TSC_hg19_v1_chr11_+_1940935 BX640689 BC050446 AK056968	1010	+	TSC_hg19_v1_chr11_+_1968573 NM_021134 U26596 Z49254 AK313805 AK128774	28664	+	BC027710 TSC_hg19_v1_chr11_+_1968589	28712	+	NM_001013254|LSP1|4046|lymphocyte-specific protein 1##NM_001013255|LSP1|4046|lymphocyte-specific protein 1##NM_001013253|LSP1|4046|lymphocyte-specific protein 1##AK092071|LSP1|4046|lymphocyte-specific protein 1##NM_001242932|LSP1|4046|lymphocyte-specific protein 1##NM_001042780|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042781|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042782|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_006757|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC062430|TNNT3|7140|troponin T type 3 (skeletal, fast)##BX640689|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC050446|TNNT3|7140|troponin T type 3 (skeletal, fast)##AK056968|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_021134|MRPL23|6150|mitochondrial ribosomal protein L23##U26596|MRPL23|6150|mitochondrial ribosomal protein L23##Z49254|MRPL23|6150|mitochondrial ribosomal protein L23##AK313805|MRPL23|6150|mitochondrial ribosomal protein L23##AK128774|MRPL23|6150|mitochondrial ribosomal protein L23##BC027710|MRPL23|6150|mitochondrial ribosomal protein L23	0.0	
chr1	244517181	244517361	reg1032573.p1	4.315	+	BC054479 NM_001012970	-1335	+	TSC_hg19_v1_chr1_+_244217286 AK310634	-299976	+	BC078175 AJ001388 NM_006352	-300728	+	CU680302 EU831433 EU831525 TSC_hg19_v1_chr1_-_244615212 AK025514 AK303886 BC012356	97905	-	TSC_hg19_v1_chr1_-_244615392 AK308749 NM_001126	98067	-	NM_001130957 NM_001242340 NM_173807 TSC_hg19_v1_chr1_+_244624690 BC032859 BC028392 AK303059 BX648685 AK302609 DQ891006 EU176575 CU689566	107430	+	BC054479|C1orf100|200159|chromosome 1 open reading frame 100##NM_001012970|C1orf100|200159|chromosome 1 open reading frame 100##BC078175|ZNF238|10472|zinc finger protein 238##AJ001388|ZNF238|10472|zinc finger protein 238##NM_006352|ZNF238|10472|zinc finger protein 238##EU831433|ADSS|159|adenylosuccinate synthase##EU831525|ADSS|159|adenylosuccinate synthase##AK025514|ADSS|159|adenylosuccinate synthase##AK303886|ADSS|159|adenylosuccinate synthase##BC012356|ADSS|159|adenylosuccinate synthase##AK308749|ADSS|159|adenylosuccinate synthase##NM_001126|ADSS|159|adenylosuccinate synthase##NM_001130957|C1orf101|257044|chromosome 1 open reading frame 101##NM_001242340|C1orf101|257044|chromosome 1 open reading frame 101##NM_173807|C1orf101|257044|chromosome 1 open reading frame 101##BC032859|C1orf101|257044|chromosome 1 open reading frame 101##BC028392|C1orf101|257044|chromosome 1 open reading frame 101##AK303059|C1orf101|257044|chromosome 1 open reading frame 101##BX648685|C1orf101|257044|chromosome 1 open reading frame 101##AK302609|C1orf101|257044|chromosome 1 open reading frame 101##DQ891006|C1orf101|257044|chromosome 1 open reading frame 101##EU176575|C1orf101|257044|chromosome 1 open reading frame 101	0.0	
chr14	65879350	65879457	reg1014882.p2	4.315	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-77	-	TSC_hg19_v1_chr14_+_65878582 BC142958 AK292413 AK294242 Y17976 Y17977	-783	+	AJ536056 NM_004480 NM_178155 NM_178156	-2094	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	85	+	TSC_hg19_v1_chr14_+_65879739 BC025385	322	+	AB037806 AF272663 NM_001024218 NM_020806	1094721	+	BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AJ536056|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_004480|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178155|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178156|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin	0.0	
chr14	91369670	91369850	reg1007135.p2	4.315	+	NM_001010854 TSC_hg19_v1_chr14_-_91282765	-86995	-	AB527232 TSC_hg19_v1_chr14_-_91282750	-87062	-	TSC_hg19_v1_chr14_+_90863372 BC011834 BC047523 U16851 BC000454 BC008597 AK289937 M27319	-506333	+	TSC_hg19_v1_chr14_-_91526731 CU677851	156994	-	TSC_hg19_v1_chr14_-_91526968 AF090421 AF074393 AF080000 BC017187 AK309925 NM_004755 NM_182398	157210	-	NM_001102366 NM_001102368 NM_001102369 NM_024952 TSC_hg19_v1_chr14_+_91580416 AK097294 AK098752 BX537970 BX161393 BX247989 BC009182 AK308857 AB210031	210645	+	NM_001010854|TTC7B|145567|tetratricopeptide repeat domain 7B##BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AF090421|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##AF074393|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##AF080000|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##BC017187|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##AK309925|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##NM_004755|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##NM_182398|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159##NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159##NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159##NM_024952|C14orf159|80017|chromosome 14 open reading frame 159##AK097294|C14orf159|80017|chromosome 14 open reading frame 159##AK098752|C14orf159|80017|chromosome 14 open reading frame 159##BX537970|C14orf159|80017|chromosome 14 open reading frame 159##BX161393|C14orf159|80017|chromosome 14 open reading frame 159##BX247989|C14orf159|80017|chromosome 14 open reading frame 159##BC009182|C14orf159|80017|chromosome 14 open reading frame 159##AK308857|C14orf159|80017|chromosome 14 open reading frame 159##AB210031|C14orf159|80017|chromosome 14 open reading frame 159	0.0	
chr15	89787007	89787126	reg1031437.p1	4.315	+	AK312457 BC004199 NM_000326 DQ980611	-22160	-	AL109729 TSC_hg19_v1_chr15_+_89739320	-47788	+	TSC_hg19_v1_chr15_+_89631738 X12433	-155329	+	TSC_hg19_v1_chr15_+_89787197 NM_001113378 NM_018193 BC146804	127	+	TSC_hg19_v1_chr15_+_89787255 AK055176 BC140769 BC144483 BC004277	184	+	BC050559 BC042571 NM_001126131 NM_002693 X98093 TSC_hg19_v1_chr15_-_89878036	90955	-	AK312457|RLBP1|6017|retinaldehyde binding protein 1##BC004199|RLBP1|6017|retinaldehyde binding protein 1##NM_000326|RLBP1|6017|retinaldehyde binding protein 1##DQ980611|RLBP1|6017|retinaldehyde binding protein 1##AL109729|ABHD2|11057|abhydrolase domain containing 2##X12433|ABHD2|11057|abhydrolase domain containing 2##NM_001113378|FANCI|55215|Fanconi anemia, complementation group I##NM_018193|FANCI|55215|Fanconi anemia, complementation group I##BC146804|FANCI|55215|Fanconi anemia, complementation group I##AK055176|FANCI|55215|Fanconi anemia, complementation group I##BC140769|FANCI|55215|Fanconi anemia, complementation group I##BC144483|FANCI|55215|Fanconi anemia, complementation group I##BC004277|FANCI|55215|Fanconi anemia, complementation group I##BC050559|POLG|5428|polymerase (DNA directed), gamma##BC042571|POLG|5428|polymerase (DNA directed), gamma##NM_001126131|POLG|5428|polymerase (DNA directed), gamma##NM_002693|POLG|5428|polymerase (DNA directed), gamma##X98093|POLG|5428|polymerase (DNA directed), gamma	0.022886	
chr17	61159770	61159880	reg1027013.p1	4.315	+	NM_025185	-72928	+	AK122947 AK093076 AX747906 BX648705 NM_152598	-274148	-	NM_001100875 BC035021	-275814	-	BC144357 TSC_hg19_v1_chr17_+_61271368	111536	+	BC091485 NM_001017917	358365	-	AK095244 NM_001017916 TSC_hg19_v1_chr17_-_61523715 AK301541 AK294403 BC002976 AK303177 AK316606 NM_001915	363811	-	NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_001100875|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC035021|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##BC091485|CYB561|1534|cytochrome b-561##NM_001017917|CYB561|1534|cytochrome b-561##AK095244|CYB561|1534|cytochrome b-561##NM_001017916|CYB561|1534|cytochrome b-561##AK301541|CYB561|1534|cytochrome b-561##AK294403|CYB561|1534|cytochrome b-561##BC002976|CYB561|1534|cytochrome b-561##AK303177|CYB561|1534|cytochrome b-561##AK316606|CYB561|1534|cytochrome b-561##NM_001915|CYB561|1534|cytochrome b-561	0.99414	CTCF.p2:-10:0.994
chr3	51676567	51676710	reg1032390.p1	4.315	+	AK122683 NM_015106	-101043	+	TSC_hg19_v1_chr3_-_51534015 AB018343 BC110371 NM_001171904 NM_014703	-142632	-	BC022792 TSC_hg19_v1_chr3_-_51533986	-142689	-	NM_001129884 NM_001243727 NM_015926 TSC_hg19_v1_chr3_+_51705247 AK023997 AK222938 AK222949 BC008742 NM_001243725 NM_001243726 AY358972 BC001592	28628	+	NM_000839 NM_001130063 AK315816 AK289984 AK313056 BC041447	64454	+	NM_001143833	136564	-	AK122683|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)##NM_015106|RAD54L2|23132|RAD54-like 2 (S. cerevisiae)##AB018343|VPRBP|9730|Vpr (HIV-1) binding protein##BC110371|VPRBP|9730|Vpr (HIV-1) binding protein##NM_001171904|VPRBP|9730|Vpr (HIV-1) binding protein##NM_014703|VPRBP|9730|Vpr (HIV-1) binding protein##BC022792|VPRBP|9730|Vpr (HIV-1) binding protein##NM_001129884|TEX264|51368|testis expressed 264##NM_001243727|TEX264|51368|testis expressed 264##NM_015926|TEX264|51368|testis expressed 264##AK023997|TEX264|51368|testis expressed 264##AK222938|TEX264|51368|testis expressed 264##AK222949|TEX264|51368|testis expressed 264##BC008742|TEX264|51368|testis expressed 264##NM_001243725|TEX264|51368|testis expressed 264##NM_001243726|TEX264|51368|testis expressed 264##AY358972|TEX264|51368|testis expressed 264##BC001592|TEX264|51368|testis expressed 264##NM_000839|GRM2|2912|glutamate receptor, metabotropic 2##NM_001130063|GRM2|2912|glutamate receptor, metabotropic 2##AK315816|GRM2|2912|glutamate receptor, metabotropic 2##AK289984|GRM2|2912|glutamate receptor, metabotropic 2##AK313056|GRM2|2912|glutamate receptor, metabotropic 2##BC041447|GRM2|2912|glutamate receptor, metabotropic 2##NM_001143833|IQCF6|440956|IQ motif containing F6	0.947577	CTCF.p2:0:0.948
chr4	113233973	113234109	reg1030515.p2	4.315	+	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	-15514	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	-27040	-	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	-80957	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	203291	-	TSC_hg19_v1_chr4_-_113558057 BC044799 BC028584 AK002193	324005	-	NM_016648	324078	+	NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2##BC044799|C4orf21|55345|chromosome 4 open reading frame 21##BC028584|C4orf21|55345|chromosome 4 open reading frame 21##AK002193|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7	0.0	
chr8	125721911	125722090	reg1030039.p1	4.315	+	TSC_hg19_v1_chr8_-_125716430 U50573	-5568	-	AF116674 TSC_hg19_v1_chr8_-_125580771	-141239	-	TSC_hg19_v1_chr8_-_125579395 AK126989	-142594	-	EF560715 TSC_hg19_v1_chr8_-_125740463 AK027015	18445	-	TSC_hg19_v1_chr8_-_125740689 AF086645 NM_014751	18723	-	NM_152412 BX537876 AK095321 BC130515 BC130517	263548	+	U50573|MTSS1|9788|metastasis suppressor 1##AF116674|MTSS1|9788|metastasis suppressor 1##AK126989|MTSS1|9788|metastasis suppressor 1##EF560715|MTSS1|9788|metastasis suppressor 1##AK027015|MTSS1|9788|metastasis suppressor 1##AF086645|MTSS1|9788|metastasis suppressor 1##NM_014751|MTSS1|9788|metastasis suppressor 1##NM_152412|ZNF572|137209|zinc finger protein 572##BX537876|ZNF572|137209|zinc finger protein 572##AK095321|ZNF572|137209|zinc finger protein 572##BC130515|ZNF572|137209|zinc finger protein 572##BC130517|ZNF572|137209|zinc finger protein 572	0.0	
chr9	90112477	90112657	reg1032836.p1	4.315	+	AK127445 NM_001001709 BC132741 BC136791 HQ258059	-348966	+	L13698 NM_002048	-550464	-	TSC_hg19_v1_chr9_-_88969326 AL832193 CR936608 AK055546 CR933644 AL832026 BX641077 CR933643 BC111003 NM_001185059 NM_001185074 NM_024617	-1143194	-	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	19	+	TSC_hg19_v1_chr9_+_90112781 NM_004938 X76104 BC003614 AK295119	301	+	NM_001912 NM_145918 TSC_hg19_v1_chr9_+_90341001	228426	+	AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##L13698|GAS1|2619|growth arrest-specific 1##NM_002048|GAS1|2619|growth arrest-specific 1##AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1##NM_004938|DAPK1|1612|death-associated protein kinase 1##X76104|DAPK1|1612|death-associated protein kinase 1##AK295119|DAPK1|1612|death-associated protein kinase 1##NM_001912|CTSL1|1514|cathepsin L1##NM_145918|CTSL1|1514|cathepsin L1	0.0	
chr10	104299920	104300071	reg1035136.p2	4.314	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	-36176	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	-36276	+	CU674342 AM393135 DQ892689 DQ895934 AB462953 BC026016 TSC_hg19_v1_chr10_-_104262470 BC000693 Z14978 X82206 AK302072 AK312506 AK297362 AK297620 NM_005736	-37538	-	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	104289	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	174102	-	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	174350	+	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2	0.0	
chr10	13124595	13124768	reg1031656.p1	4.314	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	-80982	-	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-732904	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-732964	+	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	17464	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	78887	+	BC018068 NM_145314	151646	-	AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10##BC018068|UCMA|221044|upper zone of growth plate and cartilage matrix associated##NM_145314|UCMA|221044|upper zone of growth plate and cartilage matrix associated	0.694154	CTCF.p2:36:0.694
chr10	80018568	80018678	reg1027408.p2	4.314	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-224992	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-225067	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-229309	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	810165	+	TSC_hg19_v1_chr10_+_80899458 AK025812	880861	+	TSC_hg19_v1_chr10_+_81003207 AB033050	984507	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.0	
chr12	48206860	48207022	reg1028442.p1	4.314	+	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-39907	+	AK092448 NM_001098531	-54067	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	-54532	-	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	6723	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	91860	-	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	150397	+	NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C	0.0	
chr13	31147262	31147383	reg1031923.p2	4.314	+	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	-107264	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	-107329	-	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-265753	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	44305	-	NM_005800 BC038103 TSC_hg19_v1_chr13_+_31192056 BC036027 AK289826 CR627370 X59131 BC012594 AL832776	44641	+	AK314143 NM_001204406	140292	+	AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1##NM_005800|USPL1|10208|ubiquitin specific peptidase like 1##BC038103|USPL1|10208|ubiquitin specific peptidase like 1##BC036027|USPL1|10208|ubiquitin specific peptidase like 1##AK289826|USPL1|10208|ubiquitin specific peptidase like 1##CR627370|USPL1|10208|ubiquitin specific peptidase like 1##X59131|USPL1|10208|ubiquitin specific peptidase like 1##BC012594|USPL1|10208|ubiquitin specific peptidase like 1##AL832776|USPL1|10208|ubiquitin specific peptidase like 1##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein	0.06634	
chrX	45374663	45374763	reg1010689.p2	4.314	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	-314600	-	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-642277	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-671400	+	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	931998	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	1030143	-	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	1030231	+	BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588	0.0	
chr11	122451923	122452017	reg1004003.p2	4.313	+	BC130361 BC130363 AF303179 NM_001001786	-465109	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-990872	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-1128795	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	74577	+	BC070266 AK313578 AF001622 NM_019604	257259	+	AK097534 BC068507 NM_024806 NM_199124	301461	+	BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63	0.887488	CTCF.p2:-17:0.887
chr1	157939679	157939784	reg1030821.p1	4.313	+	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	-128169	-	CU689698 AF329488 BC021274 AK315748 AK096690 BC033690 AF459634 AY043464 NM_001159397 NM_001159398 NM_052938	-149846	-	CU686705 AK301113 AY043465 AF459633 AY358130 AK303549 BC069185 NM_030764	-192839	-	AY302131 NM_018240	23331	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	23657	+	BC027926 NM_001766	210005	+	DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like##AF329488|FCRL1|115350|Fc receptor-like 1##BC021274|FCRL1|115350|Fc receptor-like 1##AK315748|FCRL1|115350|Fc receptor-like 1##AK096690|FCRL1|115350|Fc receptor-like 1##BC033690|FCRL1|115350|Fc receptor-like 1##AF459634|FCRL1|115350|Fc receptor-like 1##AY043464|FCRL1|115350|Fc receptor-like 1##NM_001159397|FCRL1|115350|Fc receptor-like 1##NM_001159398|FCRL1|115350|Fc receptor-like 1##NM_052938|FCRL1|115350|Fc receptor-like 1##AK301113|FCRL2|79368|Fc receptor-like 2##AY043465|FCRL2|79368|Fc receptor-like 2##AF459633|FCRL2|79368|Fc receptor-like 2##AY358130|FCRL2|79368|Fc receptor-like 2##AK303549|FCRL2|79368|Fc receptor-like 2##BC069185|FCRL2|79368|Fc receptor-like 2##NM_030764|FCRL2|79368|Fc receptor-like 2##AY302131|KIRREL|55243|kin of IRRE like (Drosophila)##NM_018240|KIRREL|55243|kin of IRRE like (Drosophila)##BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule	0.443928	CTCF.p2:2:0.444
chr1	21023428	21023608	reg1009277.p2	4.313	+	TSC_hg19_v1_chr1_-_20988023 NM_005216	-35489	-	TSC_hg19_v1_chr1_-_20987997 D29643 AK315633	-35516	-	TSC_hg19_v1_chr1_-_20987960 AK297009	-35551	-	AB463089 BC065927 AB290162 NM_001122819 NM_020816	20741	-	AK296431 TSC_hg19_v1_chr1_-_21058714	35189	-	AK124869 NM_001103160 NM_001103161	35614	-	NM_005216|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase##D29643|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase##AK315633|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase##AK297009|DDOST|1650|dolichyl-diphosphooligosaccharide--protein glycosyltransferase##BC065927|KIF17|57576|kinesin family member 17##AB290162|KIF17|57576|kinesin family member 17##NM_001122819|KIF17|57576|kinesin family member 17##NM_020816|KIF17|57576|kinesin family member 17##AK296431|SH2D5|400745|SH2 domain containing 5##AK124869|SH2D5|400745|SH2 domain containing 5##NM_001103160|SH2D5|400745|SH2 domain containing 5##NM_001103161|SH2D5|400745|SH2 domain containing 5	0.0	
chr13	113343299	113343479	reg1033343.p1	4.313	+	AK129953 NM_207440	-42032	+	TSC_hg19_v1_chr13_-_113260770 AK125472	-82622	-	TSC_hg19_v1_chr13_-_113242484 AK314785	-100898	-	TSC_hg19_v1_chr13_-_113344130 AK057085	717	-	TSC_hg19_v1_chr13_+_113344493 NM_015205 NM_032189	1190	+	TSC_hg19_v1_chr13_+_113622764 AB002360	279396	+	AK129953|C13orf35|400165|chromosome 13 open reading frame 35##NM_207440|C13orf35|400165|chromosome 13 open reading frame 35##AK314785|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK057085|LOC440149|440149|uncharacterized LOC440149##NM_015205|ATP11A|23250|ATPase, class VI, type 11A##NM_032189|ATP11A|23250|ATPase, class VI, type 11A##AB002360|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	0.011339	
chr16	85587023	85587089	reg1039063.p1	4.313	+	BC093665 BC111944 AK126284 NM_198491	-441002	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-525686	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-541927	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	57965	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	59897	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	135486	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.034073	
chr17	70462438	70462618	reg1024418.p3	4.313	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-345288	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-345358	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-345369	+	AK000477 TSC_hg19_v1_chr17_-_70588944	126415	-	AF331643 TSC_hg19_v1_chr17_-_71088816	626288	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	626295	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr21	37885596	37885757	reg1018190.p1	4.313	+	AF314090 AY355348 NM_001146079 NM_144492	-33289	-	BC012126 NM_012130 AY355349	-46945	-	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	-127986	+	AJ566765 NM_001146078	29221	-	AJ566766 NM_001146077	63190	-	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	185764	+	AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AJ566765|CLDN14|23562|claudin 14##NM_001146078|CLDN14|23562|claudin 14##AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14	0.0	
chr22	44444002	44444108	reg1030330.p1	4.313	+	AK308443 NM_001243386	-21872	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	-23856	+	AF303887 NM_001003828	-48965	+	BC039811 NM_001243385	20941	+	NM_001137605 AK309348 AK293360	124801	+	NM_022141 AK225929 AK307294 BC034406 AF237772	132757	+	AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##AF303887|PARVB|29780|parvin, beta##NM_001003828|PARVB|29780|parvin, beta##BC039811|PARVB|29780|parvin, beta##NM_001243385|PARVB|29780|parvin, beta##NM_001137605|PARVG|64098|parvin, gamma##AK309348|PARVG|64098|parvin, gamma##AK293360|PARVG|64098|parvin, gamma##NM_022141|PARVG|64098|parvin, gamma##AK225929|PARVG|64098|parvin, gamma##AK307294|PARVG|64098|parvin, gamma##BC034406|PARVG|64098|parvin, gamma##AF237772|PARVG|64098|parvin, gamma	0.0	
chr5	158868539	158868681	reg1032055.p1	4.313	+	BC074723 M65272 NM_002187	-111136	-	TSC_hg19_v1_chr5_+_158690297 AY444562 AK057996 BC013425	-178324	+	NM_145049	-178522	+	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	475215	+	TSC_hg19_v1_chr5_+_159436145 AK315262	567537	+	AK222641 TSC_hg19_v1_chr5_+_159436161 AK222984 NM_003314 U46570	567557	+	BC074723|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##M65272|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_002187|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##AY444562|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK057996|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##BC013425|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_145049|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##AK315262|TTC1|7265|tetratricopeptide repeat domain 1##AK222641|TTC1|7265|tetratricopeptide repeat domain 1##AK222984|TTC1|7265|tetratricopeptide repeat domain 1##NM_003314|TTC1|7265|tetratricopeptide repeat domain 1##U46570|TTC1|7265|tetratricopeptide repeat domain 1	0.0	
chr6	3280104	3280285	reg1002631.p2	4.313	+	TSC_hg19_v1_chr6_-_3272352 BC090851 BC022217	-7764	-	TSC_hg19_v1_chr6_+_3259232 AK126623 AK095683	-20955	+	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	-21036	+	BC128580 BC128581 BC038748 NM_021945	165013	-	TSC_hg19_v1_chr6_-_3456513 AL110245	176320	-	BC040876 NM_015482	176569	-	BC090851|SLC22A23|63027|solute carrier family 22, member 23##BC022217|SLC22A23|63027|solute carrier family 22, member 23##AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##BC128580|SLC22A23|63027|solute carrier family 22, member 23##BC128581|SLC22A23|63027|solute carrier family 22, member 23##BC038748|SLC22A23|63027|solute carrier family 22, member 23##NM_021945|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23	0.0	
chr13	53318019	53318085	reg1027507.p1	4.312	+	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-4090	-	AB006000 CR541910 TSC_hg19_v1_chr13_-_53313891	-4188	-	NM_001130912 NM_006704 TSC_hg19_v1_chr13_+_53227044 AJ344097 AK292128 AY321358 AK302363 AY271314 BC000911 AK291402 AB528309 AF132856 BT009798 DQ890945 DQ894108	-91110	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	104723	-	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	284860	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	4397064	+	BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AB006000|LECT1|11061|leukocyte cell derived chemotaxin 1##CR541910|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001130912|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##NM_006704|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AJ344097|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK292128|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY321358|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK302363|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY271314|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC000911|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK291402|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF132856|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BT009798|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ890945|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ894108|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	0.0	
chr15	52395866	52396046	reg1033658.p2	4.312	+	TSC_hg19_v1_chr15_+_52311442 BC035492	-84495	+	TSC_hg19_v1_chr15_+_52311432 CR749401	-84522	+	TSC_hg19_v1_chr15_+_52311425 NM_002748	-84537	+	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	8990	-	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	76185	-	TSC_hg19_v1_chr15_+_52472257 AF007131	76379	+	BC035492|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##NM_002748|MAPK6|5597|mitogen-activated protein kinase 6##AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973	0.0	
chr20	57033904	57034084	reg1033387.p2	4.312	+	AK124571 TSC_hg19_v1_chr20_+_57022525	-11502	+	TSC_hg19_v1_chr20_+_56964291 BC001712 AF086628 AF086629 AK298036 AK127252 AB529043 CU674842 BT009811	-69540	+	TSC_hg19_v1_chr20_+_56964286 NM_001195677 NM_004738 AK023241 AY358464	-69770	+	BC101758 BC101760 AK074647 NM_153360 AK293299	55904	-	TSC_hg19_v1_chr20_+_57226338 AK316547 NM_001001433 NM_001134772 NM_001134773 NM_001204868 NM_003763 AK304867 AB209296	192394	+	TSC_hg19_v1_chr20_+_57226873 BC019042 AF008935 AF008936 AF008937 BC073876 AF038897 AF428146 AK026970	192997	+	AK124571|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BC001712|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086628|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086629|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK298036|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK127252|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BT009811|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##NM_001195677|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##NM_004738|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK023241|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AY358464|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BC101758|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##BC101760|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK074647|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##NM_153360|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK293299|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK316547|STX16|8675|syntaxin 16##NM_001001433|STX16|8675|syntaxin 16##NM_001134772|STX16|8675|syntaxin 16##NM_001134773|STX16|8675|syntaxin 16##NM_001204868|STX16|8675|syntaxin 16##NM_003763|STX16|8675|syntaxin 16##AK304867|STX16|8675|syntaxin 16##AB209296|STX16-NPEPL1|100534593|STX16-NPEPL1 readthrough (non-protein coding)##BC019042|STX16|8675|syntaxin 16##AF008935|STX16|8675|syntaxin 16##AF008936|STX16|8675|syntaxin 16##AF008937|STX16|8675|syntaxin 16##BC073876|STX16|8675|syntaxin 16##AF038897|STX16|8675|syntaxin 16##AF428146|STX16|8675|syntaxin 16##AK026970|STX16|8675|syntaxin 16	0.0	
chr2	119982694	119982795	reg1032541.p1	4.312	+	TSC_hg19_v1_chr2_+_119981409 AF423424 AK001691 AY029585 AY214461 BX538047 AK291608 AF238864 AF262322 AY082673 BC095421 BC042150	-1317	+	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	-1359	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	-66340	-	BC126395 BC126397 BC144012 BC144014 BC171737 NM_001017927 TSC_hg19_v1_chr2_-_120124372 BC047365 BC105805	141594	-	NM_001079862 TSC_hg19_v1_chr2_+_120124552 FM213122 FM213123 FM213124 FM213125 FM213126 FM213128 NM_001178041 NM_001178042 NM_001178043 NM_020548	141785	+	TSC_hg19_v1_chr2_+_120124566 M15887 BC006466	141840	+	AF423424|STEAP3|55240|STEAP family member 3, metalloreductase##AK001691|STEAP3|55240|STEAP family member 3, metalloreductase##AY029585|STEAP3|55240|STEAP family member 3, metalloreductase##AY214461|STEAP3|55240|STEAP family member 3, metalloreductase##BX538047|STEAP3|55240|STEAP family member 3, metalloreductase##AK291608|STEAP3|55240|STEAP family member 3, metalloreductase##AF238864|STEAP3|55240|STEAP family member 3, metalloreductase##AF262322|STEAP3|55240|STEAP family member 3, metalloreductase##AY082673|STEAP3|55240|STEAP family member 3, metalloreductase##BC095421|STEAP3|55240|STEAP family member 3, metalloreductase##BC042150|STEAP3|55240|STEAP family member 3, metalloreductase##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##BC126395|C2orf76|130355|chromosome 2 open reading frame 76##BC126397|C2orf76|130355|chromosome 2 open reading frame 76##BC144012|C2orf76|130355|chromosome 2 open reading frame 76##BC144014|C2orf76|130355|chromosome 2 open reading frame 76##BC171737|C2orf76|130355|chromosome 2 open reading frame 76##NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76##BC047365|C2orf76|130355|chromosome 2 open reading frame 76##BC105805|C2orf76|130355|chromosome 2 open reading frame 76##NM_001079862|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213122|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213123|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213124|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213125|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213126|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213128|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178041|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178042|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178043|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_020548|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##M15887|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##BC006466|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)	0.0	
chr5	124040868	124040946	reg1032623.p2	4.312	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1193025	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1281763	-	NM_001136239 AK297992 AF272898 AF272899	-1616063	+	BC131507 AB033107 BC151226 NM_020747	39881	-	NM_001146319 AK316288 AK300154	1654907	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1717936	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.0	
chr6	101244395	101244518	reg1028468.p1	4.312	+	NM_005068 U70212	-332906	-	AK123634 NM_001040179 NM_032503 AF347063	-802346	-	AY004253 NM_021620	-1189807	+	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	84644	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	84760	-	TSC_hg19_v1_chr6_-_101329241 BC026066 AK299117	84787	-	NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC026066|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK299117|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.010095	
chr6	162343959	162344096	reg1035998.p1	4.312	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	-648967	-	AK094629 TSC_hg19_v1_chr6_-_161413451	-930614	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-931169	+	AK057286 NM_001080378 NM_152410 BC044227	804142	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	804700	-	TSC_hg19_v1_chr6_-_163148797 AB245403 AK292590 BC022014	804751	-	AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB245403|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AK292590|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##BC022014|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.0	
chr7	137584250	137584431	reg1001996.p2	4.312	+	TSC_hg19_v1_chr7_+_137531690 BC047556	-52608	+	TSC_hg19_v1_chr7_-_137531587 NM_004717	-52744	-	BC005916 TSC_hg19_v1_chr7_-_137028543 NM_002825 M57399	-555785	-	TSC_hg19_v1_chr7_-_137620668 BC015585	36322	-	NM_001243523	53753	+	AK293048 BC110813 TSC_hg19_v1_chr7_-_137686800 BC063666 AJ549092 AJ549387	102454	-	NM_004717|DGKI|9162|diacylglycerol kinase, iota##BC005916|PTN|5764|pleiotrophin##NM_002825|PTN|5764|pleiotrophin##M57399|PTN|5764|pleiotrophin##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_001243523|LOC100130880|100130880|uncharacterized LOC100130880##AK293048|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC110813|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC063666|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549092|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549387|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.0	
chrX	68027787	68027895	reg1017780.p1	4.312	+	TSC_hg19_v1_chrX_+_67913490 D80011	-114350	+	TSC_hg19_v1_chrX_+_67913480 AK291747 NM_001142504	-114361	+	BC035587 NM_001142503 NM_014725 CR749411	-160282	+	TSC_hg19_v1_chrX_+_68048863 BC052979 BC016649 NM_004429 AK311197 U09303	21014	+	TSC_hg19_v1_chrX_-_68385297 AK290543 AK226171 BC075803 AF264620 AK293266 AK294632 AK096611 NM_001032396 NM_022368 NM_145119	357465	-	AF087142 NM_015686 BC136518 BC136519	697242	+	D80011|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##AK291747|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142504|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##BC035587|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_001142503|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##NM_014725|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##CR749411|STARD8|9754|StAR-related lipid transfer (START) domain containing 8##BC052979|EFNB1|1947|ephrin-B1##BC016649|EFNB1|1947|ephrin-B1##NM_004429|EFNB1|1947|ephrin-B1##U09303|EFNB1|1947|ephrin-B1##AK290543|PJA1|64219|praja ring finger 1##AK226171|PJA1|64219|praja ring finger 1##BC075803|PJA1|64219|praja ring finger 1##AF264620|PJA1|64219|praja ring finger 1##AK293266|PJA1|64219|praja ring finger 1##AK294632|PJA1|64219|praja ring finger 1##AK096611|PJA1|64219|praja ring finger 1##NM_001032396|PJA1|64219|praja ring finger 1##NM_022368|PJA1|64219|praja ring finger 1##NM_145119|PJA1|64219|praja ring finger 1##AF087142|FAM155B|27112|family with sequence similarity 155, member B##NM_015686|FAM155B|27112|family with sequence similarity 155, member B##BC136518|FAM155B|27112|family with sequence similarity 155, member B##BC136519|FAM155B|27112|family with sequence similarity 155, member B	0.915924	CTCF.p2:17:0.916
chr10	85561897	85562021	reg1027620.p1	4.311	+	DQ857894 NM_001165973	-1924517	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-1926877	+	AK123978 NM_001145719	-3261385	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	337298	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	369833	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	371600	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.262367	CTCF.p2:-24:0.262
chr10	89868198	89868340	reg1026380.p2	4.311	+	TSC_hg19_v1_chr10_+_89623420 U96180	-244842	+	TSC_hg19_v1_chr10_+_89623380 BC005821	-244880	+	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	-245043	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	474745	-	BC042900 BC031219 NM_001010939	478244	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	555911	+	U96180|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric	0.0	
chr12	129315173	129315353	reg1030556.p2	4.311	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	-6820	-	NM_001136103	-563316	+	NM_052907	-3504102	+	BC043528 TSC_hg19_v1_chr12_+_129337985	22721	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	22824	+	BC114626 BC114936 NM_133448 AB061814	1072948	-	BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D	0.0	
chr14	23005887	23006009	reg1029865.p1	4.311	+	X58763 TSC_hg19_v1_chr14_+_22989364	-16599	+	AB463964 NM_001001912 AY726598	-872626	+	NM_001005466 AB529274 BC137371 BC137382	-902902	-	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	52138	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	52186	-	TSC_hg19_v1_chr14_+_23067208 AK022878 NM_022060 AX721056 BC024779 AK298127 AK301315 AK293198	61241	+	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1##AK022878|ABHD4|63874|abhydrolase domain containing 4##NM_022060|ABHD4|63874|abhydrolase domain containing 4##BC024779|ABHD4|63874|abhydrolase domain containing 4##AK298127|ABHD4|63874|abhydrolase domain containing 4##AK301315|ABHD4|63874|abhydrolase domain containing 4##AK293198|ABHD4|63874|abhydrolase domain containing 4	0.0	
chr1	90452696	90452877	reg1003949.p1	4.311	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-165222	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-165328	+	TSC_hg19_v1_chr1_+_90286603 AK092238 AX747423	-166187	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	7930	+	BC126439 BC126441 AY338397 NM_020063	729999	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	1034252	-	BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##AK092238|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644	0.0	
chr20	50211882	50212024	reg1001048.p2	4.311	+	AK304147 AK226146 EU887575 EU887579 TSC_hg19_v1_chr20_-_50179379	-32569	-	EU887574 EU887577 NM_001136021	-32786	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	-52678	-	BC110591 BC110592 BC063701 TSC_hg19_v1_chr20_-_50314160	102125	-	TSC_hg19_v1_chr20_-_50384875 AB385363 AB014511 AK299064	172925	-	TSC_hg19_v1_chr20_-_50384925 NM_006045	172975	-	AK304147|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##AK226146|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887575|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887579|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC110591|ATP9A|10079|ATPase, class II, type 9A##BC110592|ATP9A|10079|ATPase, class II, type 9A##BC063701|ATP9A|10079|ATPase, class II, type 9A##AB014511|ATP9A|10079|ATPase, class II, type 9A##AK299064|ATP9A|10079|ATPase, class II, type 9A##NM_006045|ATP9A|10079|ATPase, class II, type 9A	0.0	
chr5	88609894	88609997	reg1024313.p2	4.311	+	AL833268 AL833274 NM_001131005 NM_001193347	-410051	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-424681	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-424825	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	1095594	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1160237	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1160633	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr9	117150282	117150463	reg1037568.p2	4.311	+	AY703041 AY703042 AK131082 AK160382 TSC_hg19_v1_chr9_-_117150263 AB075848	-82	-	BC042202 TSC_hg19_v1_chr9_-_117111294	-39083	-	NM_000608 AK312226 BC015964 BC056239 AK303760 CR456930 CU677539	-58246	+	AY703040 BC055285 NM_030767	6312	-	AY703039 AK126136 TSC_hg19_v1_chr9_-_117160753	10379	-	AL110228 NM_001083885	115101	-	AY703041|AKNA|80709|AT-hook transcription factor##AY703042|AKNA|80709|AT-hook transcription factor##AK131082|AKNA|80709|AT-hook transcription factor##AK160382|AKNA|80709|AT-hook transcription factor##AB075848|AKNA|80709|AT-hook transcription factor##BC042202|AKNA|80709|AT-hook transcription factor##NM_000608|ORM2|5005|orosomucoid 2##AK312226|ORM2|5005|orosomucoid 2##BC015964|ORM2|5005|orosomucoid 2##BC056239|ORM2|5005|orosomucoid 2##AK303760|ORM2|5005|orosomucoid 2##CR456930|ORM2|5005|orosomucoid 2##AY703040|AKNA|80709|AT-hook transcription factor##BC055285|AKNA|80709|AT-hook transcription factor##NM_030767|AKNA|80709|AT-hook transcription factor##AY703039|AKNA|80709|AT-hook transcription factor##AK126136|AKNA|80709|AT-hook transcription factor##AL110228|DFNB31|25861|deafness, autosomal recessive 31##NM_001083885|DFNB31|25861|deafness, autosomal recessive 31	0.0	
chr1	170043937	170044039	reg1031329.p1	4.310	+	CU688542 DQ890952 DQ894114 AK026471 TSC_hg19_v1_chr1_-_170043807 AK315586 U59919 AK297368 AK303052 BC028679 NM_001204514 NM_001204516 NM_014970	-245	-	AK122897 NM_001204517	-5933	-	TSC_hg19_v1_chr1_-_169863059 NM_020423 NM_181093	-180926	-	BC157860 BC171858 NM_001136107	71199	+	TSC_hg19_v1_chr1_+_170501309 AK308339 NM_001146039 NM_152281 AK021814 BC064945 CU687974 BC047476 AK057661	457315	+	TSC_hg19_v1_chr1_+_170632302 AK225968	588302	+	DQ890952|KIFAP3|22920|kinesin-associated protein 3##DQ894114|KIFAP3|22920|kinesin-associated protein 3##AK026471|KIFAP3|22920|kinesin-associated protein 3##AK315586|KIFAP3|22920|kinesin-associated protein 3##U59919|KIFAP3|22920|kinesin-associated protein 3##AK297368|KIFAP3|22920|kinesin-associated protein 3##AK303052|KIFAP3|22920|kinesin-associated protein 3##BC028679|KIFAP3|22920|kinesin-associated protein 3##NM_001204514|KIFAP3|22920|kinesin-associated protein 3##NM_001204516|KIFAP3|22920|kinesin-associated protein 3##NM_014970|KIFAP3|22920|kinesin-associated protein 3##AK122897|KIFAP3|22920|kinesin-associated protein 3##NM_001204517|KIFAP3|22920|kinesin-associated protein 3##NM_020423|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##NM_181093|SCYL3|57147|SCY1-like 3 (S. cerevisiae)##BC157860|METTL11B|149281|methyltransferase like 11B##BC171858|METTL11B|149281|methyltransferase like 11B##NM_001136107|METTL11B|149281|methyltransferase like 11B##AK308339|GORAB|92344|golgin, RAB6-interacting##NM_001146039|GORAB|92344|golgin, RAB6-interacting##NM_152281|GORAB|92344|golgin, RAB6-interacting##AK021814|GORAB|92344|golgin, RAB6-interacting##BC064945|GORAB|92344|golgin, RAB6-interacting##BC047476|GORAB|92344|golgin, RAB6-interacting##AK057661|GORAB|92344|golgin, RAB6-interacting##AK225968|PRRX1|5396|paired related homeobox 1	0.936438	CTCF.p2:15:0.936
chr1	178511378	178511516	reg1006827.p1	4.310	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-29181	+	AF047711 NM_004841 AK290308	-200813	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-447806	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	182926	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	328699	-	TSC_hg19_v1_chr1_+_178995028 AB007944	483573	+	AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##BC110611|RASAL2|9462|RAS protein activator like 2##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##AB007944|FAM20B|9917|family with sequence similarity 20, member B	0.0	
chr14	22733267	22733444	reg1035718.p2	4.310	+	AB463964 NM_001001912 AY726598	-600033	+	NM_001005466 AB529274 BC137371 BC137382	-630309	-	AB528817 NM_001005465	-694481	-	X58763 TSC_hg19_v1_chr14_+_22989364	255994	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	324731	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	324779	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.963317	CTCF.p2:22:0.963
chr19	1266452	1266550	reg1003246.p1	4.310	+	TSC_hg19_v1_chr19_+_1249886 BC060848 BC094778	-16617	+	TSC_hg19_v1_chr19_+_1248581 NM_177401	-17927	+	TSC_hg19_v1_chr19_+_1241811 BC050458 BC018079 CR542218	-24668	+	TSC_hg19_v1_chr19_+_1269330 NM_001280 AK095781 AK304185 AK304470 AK311601 AK128423 AF021336 AK094781 D78134 BC000901 BC000403	2804	+	CU674448 AB528491 EU176219 EU176522 AB451225 AB451348 BT007210 TSC_hg19_v1_chr19_+_1270968	4448	+	TSC_hg19_v1_chr19_+_1275540 NM_017914 BC000890 BC012080	9066	+	BC060848|MIDN|90007|midnolin##BC094778|MIDN|90007|midnolin##NM_177401|MIDN|90007|midnolin##BC050458|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC018079|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##CR542218|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001280|CIRBP|1153|cold inducible RNA binding protein##AK095781|CIRBP|1153|cold inducible RNA binding protein##AK304185|CIRBP|1153|cold inducible RNA binding protein##AK304470|CIRBP|1153|cold inducible RNA binding protein##AK311601|CIRBP|1153|cold inducible RNA binding protein##AK128423|CIRBP|1153|cold inducible RNA binding protein##AF021336|CIRBP|1153|cold inducible RNA binding protein##AK094781|CIRBP|1153|cold inducible RNA binding protein##D78134|CIRBP|1153|cold inducible RNA binding protein##BC000901|CIRBP|1153|cold inducible RNA binding protein##BC000403|CIRBP|1153|cold inducible RNA binding protein##EU176219|CIRBP|1153|cold inducible RNA binding protein##EU176522|CIRBP|1153|cold inducible RNA binding protein##AB451225|CIRBP|1153|cold inducible RNA binding protein##AB451348|CIRBP|1153|cold inducible RNA binding protein##BT007210|CIRBP|1153|cold inducible RNA binding protein##NM_017914|C19orf24|55009|chromosome 19 open reading frame 24##BC000890|C19orf24|55009|chromosome 19 open reading frame 24##BC012080|C19orf24|55009|chromosome 19 open reading frame 24	0.016107	
chr2	86114866	86115019	reg1032559.p1	4.310	+	AY152815 NM_001042437	-20150	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-133937	+	NM_006433 NM_012483 X54101 AK310057 AK311537 AK311012 AK311657 BC063245 AK304728 TSC_hg19_v1_chr2_+_85921514 DQ892267 DQ895468 BC023576 CR541859 X05044	-193462	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	1144	-	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	218041	-	NM_015425	218335	-	AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##NM_006433|GNLY|10578|granulysin##NM_012483|GNLY|10578|granulysin##X54101|GNLY|10578|granulysin##AK310057|GNLY|10578|granulysin##AK311537|GNLY|10578|granulysin##AK311012|GNLY|10578|granulysin##AK311657|GNLY|10578|granulysin##BC063245|GNLY|10578|granulysin##AK304728|GNLY|10578|granulysin##DQ892267|GNLY|10578|granulysin##DQ895468|GNLY|10578|granulysin##BC023576|GNLY|10578|granulysin##CR541859|GNLY|10578|granulysin##X05044|GNLY|10578|granulysin##AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa	0.975861	CTCF.p2:-8:0.976
chr10	50372659	50372747	reg1007460.p1	4.309	+	BC029839 BC047597 NM_001164484	-30645	-	TSC_hg19_v1_chr10_-_50323537 BC041414 AK297931 AK056299 NM_001031746 NM_144984	-49180	-	NM_001006939 BC036722	-250423	-	DQ884399 TSC_hg19_v1_chr10_-_50396437 BC047724 BC104438 BC104439 NM_001010863 BC037922 BC042857 AK303891	23723	-	AK127811 NM_001135196 NM_199459 TSC_hg19_v1_chr10_+_50507214 AL833265	134508	+	NM_001080520	227203	-	BC029839|FAM170B|170370|family with sequence similarity 170, member B##BC047597|FAM170B|170370|family with sequence similarity 170, member B##NM_001164484|FAM170B|170370|family with sequence similarity 170, member B##BC041414|VSTM4|196740|V-set and transmembrane domain containing 4##AK297931|VSTM4|196740|V-set and transmembrane domain containing 4##AK056299|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001031746|VSTM4|196740|V-set and transmembrane domain containing 4##NM_144984|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18##DQ884399|C10orf128|170371|chromosome 10 open reading frame 128##BC047724|C10orf128|170371|chromosome 10 open reading frame 128##BC104438|C10orf128|170371|chromosome 10 open reading frame 128##BC104439|C10orf128|170371|chromosome 10 open reading frame 128##NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128##BC037922|C10orf128|170371|chromosome 10 open reading frame 128##BC042857|C10orf128|170371|chromosome 10 open reading frame 128##AK127811|C10orf71|118461|chromosome 10 open reading frame 71##NM_001135196|C10orf71|118461|chromosome 10 open reading frame 71##NM_199459|C10orf71|118461|chromosome 10 open reading frame 71##AL833265|C10orf71|118461|chromosome 10 open reading frame 71##NM_001080520|DRGX|644168|dorsal root ganglia homeobox	0.0	
chr12	14520422	14520525	reg1033113.p2	4.309	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	-1838	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-387487	-	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-1170744	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	17799	+	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	200136	-	NM_024829 TSC_hg19_v1_chr12_-_14720806	200331	-	AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1##NM_024829|PLBD1|79887|phospholipase B domain containing 1	0.0	
chr1	24125983	24126064	reg1031027.p1	4.309	+	TSC_hg19_v1_chr1_+_24122327 CU674637	-3640	+	AF098668 NM_007260 TSC_hg19_v1_chr1_+_24117657 BC017034 BC017193	-8346	+	AK313005 TSC_hg19_v1_chr1_+_24104907 BC017208 CU677865 DQ891919 DQ895103	-21068	+	AK314397 TSC_hg19_v1_chr1_-_24126033 NM_001127621	22	-	L41668 TSC_hg19_v1_chr1_-_24127069 NM_000403	969	-	TSC_hg19_v1_chr1_-_24127245 BC056880 BC001273 BC050685 AK096127 AK307354 AK057302 NM_001008216	1219	-	AF098668|LYPLA2|11313|lysophospholipase II##NM_007260|LYPLA2|11313|lysophospholipase II##BC017034|LYPLA2|11313|lysophospholipase II##BC017193|LYPLA2|11313|lysophospholipase II##AK313005|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##BC017208|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##DQ891919|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##DQ895103|PITHD1|57095|PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1##AK314397|GALE|2582|UDP-galactose-4-epimerase##NM_001127621|GALE|2582|UDP-galactose-4-epimerase##L41668|GALE|2582|UDP-galactose-4-epimerase##NM_000403|GALE|2582|UDP-galactose-4-epimerase##BC056880|GALE|2582|UDP-galactose-4-epimerase##BC001273|GALE|2582|UDP-galactose-4-epimerase##BC050685|GALE|2582|UDP-galactose-4-epimerase##AK096127|GALE|2582|UDP-galactose-4-epimerase##AK307354|GALE|2582|UDP-galactose-4-epimerase##AK057302|GALE|2582|UDP-galactose-4-epimerase##NM_001008216|GALE|2582|UDP-galactose-4-epimerase	0.0	
chr16	84628101	84628281	reg1023130.p2	4.309	+	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	-89900	-	TSC_hg19_v1_chr16_+_84402143 AK300526 AY791884 BX648333 NM_014861 AK316128 CR749829	-226049	+	AF302109 NM_021197 AF169631 TSC_hg19_v1_chr16_+_84328440 AK075061 BC029159 DQ893365 DQ896682	-299703	+	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	23385	-	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	23469	-	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	53943	+	BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##AK300526|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AY791884|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BX648333|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##NM_014861|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AK316128|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##CR749829|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AF302109|WFDC1|58189|WAP four-disulfide core domain 1##NM_021197|WFDC1|58189|WAP four-disulfide core domain 1##AF169631|WFDC1|58189|WAP four-disulfide core domain 1##AK075061|WFDC1|58189|WAP four-disulfide core domain 1##BC029159|WFDC1|58189|WAP four-disulfide core domain 1##DQ893365|WFDC1|58189|WAP four-disulfide core domain 1##DQ896682|WFDC1|58189|WAP four-disulfide core domain 1##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)	0.0	
chr20	61640823	61641004	reg1000073.p2	4.309	+	BC137288 BC137308 NM_080606	-2527	-	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-56788	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-56883	+	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	206610	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	226428	+	TSC_hg19_v1_chr20_-_61884664 AK308958	243820	-	BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7##AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4	0.0	
chr2	232257947	232258038	reg1032223.p1	4.309	+	TSC_hg19_v1_chr2_+_232120778 AB055779	-137214	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-194598	+	AY219922 TSC_hg19_v1_chr2_+_232063378	-194614	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	2430	+	AK001314 TSC_hg19_v1_chr2_-_232326464	68437	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	71143	-	AY929062|ARMC9|80210|armadillo repeat containing 9##AY219922|ARMC9|80210|armadillo repeat containing 9##AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK001314|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin	0.011418	
chr5	175145964	175146059	reg1030289.p2	4.309	+	NM_022304	-37548	+	TSC_hg19_v1_chr5_+_175085101 AB023487	-60900	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	-60973	+	TSC_hg19_v1_chr5_+_175223538 NM_006650 U35100	77553	+	TSC_hg19_v1_chr5_+_175298517 AY576870 NM_001008220 AK124837	152498	+	TSC_hg19_v1_chr5_+_175298551 AK314177	152534	+	NM_022304|HRH2|3274|histamine receptor H2##AB023487|HRH2|3274|histamine receptor H2##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2##NM_006650|CPLX2|10814|complexin 2##U35100|CPLX2|10814|complexin 2##AY576870|CPLX2|10814|complexin 2##NM_001008220|CPLX2|10814|complexin 2##AK124837|CPLX2|10814|complexin 2##AK314177|CPLX2|10814|complexin 2	0.990331	CTCF.p2:1:0.990
chr9	131614463	131614544	reg1029128.p1	4.309	+	TSC_hg19_v1_chr9_-_131592074 BC039590 AK303563 AL110193 NM_016390	-22409	-	AF161459 TSC_hg19_v1_chr9_-_131592073	-22431	-	CU687792 BC010579 BC021273 BC046133 TSC_hg19_v1_chr9_-_131592067 BC056890 BC033677 BC063644	-22438	-	TSC_hg19_v1_chr9_-_131644230 BC033685 AK297995 AK314427 BC022468 BC021262 AK291178 NM_001122671 NM_001122672 NM_004059	29761	-	TSC_hg19_v1_chr9_+_131644390 NM_001127245 NM_019594	29880	+	TSC_hg19_v1_chr9_+_131644447 AB037858 BC051322	29949	+	BC039590|C9orf114|51490|chromosome 9 open reading frame 114##AK303563|C9orf114|51490|chromosome 9 open reading frame 114##AL110193|C9orf114|51490|chromosome 9 open reading frame 114##NM_016390|C9orf114|51490|chromosome 9 open reading frame 114##AF161459|C9orf114|51490|chromosome 9 open reading frame 114##BC010579|C9orf114|51490|chromosome 9 open reading frame 114##BC021273|C9orf114|51490|chromosome 9 open reading frame 114##BC046133|C9orf114|51490|chromosome 9 open reading frame 114##BC056890|C9orf114|51490|chromosome 9 open reading frame 114##BC033677|C9orf114|51490|chromosome 9 open reading frame 114##BC063644|C9orf114|51490|chromosome 9 open reading frame 114##BC033685|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##AK297995|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##AK314427|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##BC022468|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##BC021262|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##AK291178|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##NM_001122671|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##NM_001122672|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##NM_004059|CCBL1|883|cysteine conjugate-beta lyase, cytoplasmic##NM_001127245|LRRC8A|56262|leucine rich repeat containing 8 family, member A##NM_019594|LRRC8A|56262|leucine rich repeat containing 8 family, member A##AB037858|LRRC8A|56262|leucine rich repeat containing 8 family, member A##BC051322|LRRC8A|56262|leucine rich repeat containing 8 family, member A	0.0	
chrX	70199382	70199501	reg1034644.p2	4.309	+	AF320612 BC033816 AX721169 BC021242 AK074865 AK075014 NM_001048164 NM_032803	-48492	-	AK057523 AK292471 BC036016 NM_001003811 NM_031276	-70878	-	TSC_hg19_v1_chrX_+_69674948 AK303377 NM_001166278	-524507	+	BT007203 TSC_hg19_v1_chrX_-_70288224 BC080535 AF171229 BC103847 BC103848 BC020559 NM_013346 AK312977	88759	-	TSC_hg19_v1_chrX_+_70316026 NM_001170931 NM_005938 AK300142 X93996 BC106761 AB463650 AF384029	116566	+	NM_001025265	127196	-	AF320612|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##BC033816|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK074865|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK075014|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_001048164|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##NM_032803|SLC7A3|84889|solute carrier family 7 (cationic amino acid transporter, y+ system), member 3##AK057523|TEX11|56159|testis expressed 11##AK292471|TEX11|56159|testis expressed 11##BC036016|TEX11|56159|testis expressed 11##NM_001003811|TEX11|56159|testis expressed 11##NM_031276|TEX11|56159|testis expressed 11##AK303377|DLG3|1741|discs, large homolog 3 (Drosophila)##NM_001166278|DLG3|1741|discs, large homolog 3 (Drosophila)##BT007203|SNX12|29934|sorting nexin 12##BC080535|SNX12|29934|sorting nexin 12##AF171229|SNX12|29934|sorting nexin 12##BC103847|SNX12|29934|sorting nexin 12##BC103848|SNX12|29934|sorting nexin 12##BC020559|SNX12|29934|sorting nexin 12##NM_013346|SNX12|29934|sorting nexin 12##AK312977|SNX12|29934|sorting nexin 12##NM_001170931|FOXO4|4303|forkhead box O4##NM_005938|FOXO4|4303|forkhead box O4##X93996|FOXO4|4303|forkhead box O4##BC106761|FOXO4|4303|forkhead box O4##AF384029|FOXO4|4303|forkhead box O4##NM_001025265|CXorf65|158830|chromosome X open reading frame 65	0.908229	CTCF.p2:-2:0.908
chr10	3825548	3825728	reg1032330.p2	4.308	+	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-610633	-	CU678866 TSC_hg19_v1_chr10_-_3214975 AB384562 BC005025 AK225084 AK293788 AK315117 AK294865 AK299464 AK303406 BC095422 BX649017 AF061243	-610668	-	BC045577 TSC_hg19_v1_chr10_-_3214936	-610713	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	1673	-	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	1871	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1042780	+	BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC005025|PITRM1|10531|pitrilysin metallopeptidase 1##AK225084|PITRM1|10531|pitrilysin metallopeptidase 1##AK293788|PITRM1|10531|pitrilysin metallopeptidase 1##AK315117|PITRM1|10531|pitrilysin metallopeptidase 1##AK294865|PITRM1|10531|pitrilysin metallopeptidase 1##AK299464|PITRM1|10531|pitrilysin metallopeptidase 1##AK303406|PITRM1|10531|pitrilysin metallopeptidase 1##BC095422|PITRM1|10531|pitrilysin metallopeptidase 1##BX649017|PITRM1|10531|pitrilysin metallopeptidase 1##AF061243|PITRM1|10531|pitrilysin metallopeptidase 1##BC045577|PITRM1|10531|pitrilysin metallopeptidase 1##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2	0.0	
chr10	82271301	82271402	reg1033011.p2	4.308	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-57247	+	TSC_hg19_v1_chr10_+_82214071 AF311903	-57280	+	AK074558 AK295321 AL136638 TSC_hg19_v1_chr10_+_82214066	-57283	+	AK123885 NM_207372	26306	+	AK123978 NM_001145719	29223	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	1363731	+	BC002920|TSPAN14|81619|tetraspanin 14##AF311903|TSPAN14|81619|tetraspanin 14##AK074558|TSPAN14|81619|tetraspanin 14##AK295321|TSPAN14|81619|tetraspanin 14##AL136638|TSPAN14|81619|tetraspanin 14##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3	0.0	
chr11	129100013	129100181	reg1036491.p1	4.308	+	EF127492 NM_001142685	-38005	-	AB018255 AY194287 TSC_hg19_v1_chr11_-_128894084 AB079856 NM_014715	-206036	-	NM_001195195 NM_001251964 NM_022112	-286804	-	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	145784	+	TSC_hg19_v1_chr11_+_129685744 AK098106 NM_138788 AK290283 AK292058	585647	+	NM_006165 X80878	662806	-	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##AB018255|ARHGAP32|9743|Rho GTPase activating protein 32##AY194287|ARHGAP32|9743|Rho GTPase activating protein 32##AB079856|ARHGAP32|9743|Rho GTPase activating protein 32##NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001195195|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001251964|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_022112|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2##AK098106|TMEM45B|120224|transmembrane protein 45B##NM_138788|TMEM45B|120224|transmembrane protein 45B##AK290283|TMEM45B|120224|transmembrane protein 45B##AK292058|TMEM45B|120224|transmembrane protein 45B##NM_006165|NFRKB|4798|nuclear factor related to kappaB binding protein##X80878|NFRKB|4798|nuclear factor related to kappaB binding protein	0.0	
chr8	42243237	42243304	reg1003188.p2	4.308	+	AB017788 BC107046 BC107047 AF177397 NM_014420 AK311714 AK301609	-8618	-	NM_002690 AK223537 TSC_hg19_v1_chr8_+_42196014 BC100288 AK294025 AK314976 D29013 M13140 BC106909 AB464039 CR536503 CR541802 L11607	-47213	+	BC090865 TSC_hg19_v1_chr8_+_42128868 AF080158 AK298241 AB209090 BC108694 AK290952 BC144080 BX648165	-114355	+	NM_001135694 NM_005662 TSC_hg19_v1_chr8_+_42249355	6048	+	TSC_hg19_v1_chr8_+_42249386 AF038962	6117	+	TSC_hg19_v1_chr8_+_42249394 AK307224 AK058201 AK308760 BC056870 BC002456	6141	+	AB017788|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##BC107046|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##BC107047|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##AF177397|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##NM_014420|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##AK301609|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##NM_002690|POLB|5423|polymerase (DNA directed), beta##AK223537|POLB|5423|polymerase (DNA directed), beta##BC100288|POLB|5423|polymerase (DNA directed), beta##AK294025|POLB|5423|polymerase (DNA directed), beta##AK314976|POLB|5423|polymerase (DNA directed), beta##D29013|POLB|5423|polymerase (DNA directed), beta##M13140|POLB|5423|polymerase (DNA directed), beta##BC106909|POLB|5423|polymerase (DNA directed), beta##CR536503|POLB|5423|polymerase (DNA directed), beta##CR541802|POLB|5423|polymerase (DNA directed), beta##L11607|POLB|5423|polymerase (DNA directed), beta##BC090865|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AF080158|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK298241|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AB209090|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC108694|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK290952|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC144080|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BX648165|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001135694|VDAC3|7419|voltage-dependent anion channel 3##NM_005662|VDAC3|7419|voltage-dependent anion channel 3##AF038962|VDAC3|7419|voltage-dependent anion channel 3##AK307224|VDAC3|7419|voltage-dependent anion channel 3##AK058201|VDAC3|7419|voltage-dependent anion channel 3##AK308760|VDAC3|7419|voltage-dependent anion channel 3##BC056870|VDAC3|7419|voltage-dependent anion channel 3	0.0	
chr9	16824868	16825013	reg1030501.p2	4.308	+	TSC_hg19_v1_chr9_-_16727889 AY438376	-97043	-	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-1271919	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-1313980	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	45727	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	45826	-	TSC_hg19_v1_chr9_+_17134988 AK303973 AK308837 BX647069 AK098502 NM_001114395 NM_017738	310077	+	AY438376|BNC2|54796|basonuclin 2##AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2##AK303973|CNTLN|54875|centlein, centrosomal protein##AK308837|CNTLN|54875|centlein, centrosomal protein##BX647069|CNTLN|54875|centlein, centrosomal protein##AK098502|CNTLN|54875|centlein, centrosomal protein##NM_001114395|CNTLN|54875|centlein, centrosomal protein##NM_017738|CNTLN|54875|centlein, centrosomal protein	0.686624	CTCF.p2:29:0.687
chr12	4252015	4252158	reg1029740.p1	4.307	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-269586	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-389704	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-389818	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	130958	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	178305	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	236714	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.282788	CTCF.p2:5:0.283
chr14	72915038	72915175	reg1033161.p1	4.307	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-515240	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-515953	+	AK294895 NM_001204423	-516290	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	445702	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	478029	+	AK098542 AF311602 NM_178441	538551	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.035317	
chr17	66243807	66243965	reg1031561.p2	4.307	+	TSC_hg19_v1_chr17_+_66097706 BC045718	-146188	+	TSC_hg19_v1_chr17_+_66031889 BC034443	-211998	+	TSC_hg19_v1_chr17_+_66031850 NM_002266 U09559 U28386 AK024833 AK058111 AK291954 BC005978 BC013257 BC053343 BC146905	-212046	+	NM_001033569 NM_001033570 NM_001033571 NM_001033572 NM_001033574 NM_016627 TSC_hg19_v1_chr17_+_66244216 BC056271 BC050709	294	+	TSC_hg19_v1_chr17_+_66244233 AF208856	357	+	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	11448	+	BC045718|LOC100499466|100499466|uncharacterized LOC100499466##BC034443|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##NM_002266|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U09559|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##U28386|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK024833|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK058111|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##AK291954|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC005978|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC013257|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC053343|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##BC146905|KPNA2|3838|karyopherin alpha 2 (RAG cohort 1, importin alpha 1)##NM_001033569|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033570|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033571|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033572|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033574|AMZ2|51321|archaelysin family metallopeptidase 2##NM_016627|AMZ2|51321|archaelysin family metallopeptidase 2##BC056271|AMZ2|51321|archaelysin family metallopeptidase 2##BC050709|AMZ2|51321|archaelysin family metallopeptidase 2##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G	0.0	
chr19	58892686	58892865	reg1025640.p4	4.307	+	TSC_hg19_v1_chr19_-_58892398 BC029960 NM_001129730 NM_138466	-359	-	BC118983 BC125273 AK124712 AK125350 TSC_hg19_v1_chr19_-_58874199 AK126727 AK172804 AK131209 NM_001207009 NM_198458	-18593	-	TSC_hg19_v1_chr19_-_58864830 AK289417 AF414429 AK055885 AB073611 NM_130786	-27933	-	TSC_hg19_v1_chr19_+_58898635 AK223106 AK311938 D28455 NM_001009 BC015405 BC018828 BC018151 BC035830 U14970	5877	+	NM_001195135	14681	+	TSC_hg19_v1_chr19_+_58920045 AK290068 BC033149 NM_173548	27272	+	BC029960|ZNF837|116412|zinc finger protein 837##NM_001129730|ZNF837|116412|zinc finger protein 837##NM_138466|ZNF837|116412|zinc finger protein 837##BC118983|ZNF497|162968|zinc finger protein 497##BC125273|ZNF497|162968|zinc finger protein 497##AK126727|ZNF497|162968|zinc finger protein 497##AK131209|ZNF497|162968|zinc finger protein 497##NM_001207009|ZNF497|162968|zinc finger protein 497##NM_198458|ZNF497|162968|zinc finger protein 497##AK289417|A1BG|1|alpha-1-B glycoprotein##AF414429|A1BG|1|alpha-1-B glycoprotein##AK055885|A1BG|1|alpha-1-B glycoprotein##AB073611|A1BG|1|alpha-1-B glycoprotein##NM_130786|A1BG|1|alpha-1-B glycoprotein##AK223106|RPS5|6193|ribosomal protein S5##AK311938|RPS5|6193|ribosomal protein S5##D28455|RPS5|6193|ribosomal protein S5##NM_001009|RPS5|6193|ribosomal protein S5##BC015405|RPS5|6193|ribosomal protein S5##BC018828|RPS5|6193|ribosomal protein S5##BC018151|RPS5|6193|ribosomal protein S5##BC035830|RPS5|6193|ribosomal protein S5##U14970|RPS5|6193|ribosomal protein S5##NM_001195135|LOC646862|646862|uncharacterized LOC646862##AK290068|ZNF584|201514|zinc finger protein 584##BC033149|ZNF584|201514|zinc finger protein 584##NM_173548|ZNF584|201514|zinc finger protein 584	0.0	
chr2	60564281	60564377	reg1021244.p2	4.307	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2095847	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-2290341	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-2290575	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	216193	-	AF080216 TSC_hg19_v1_chr2_-_60780784	216449	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	419155	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.933577	CTCF.p2:9:0.934
chr4	119460734	119460843	reg1033559.p1	4.307	+	TSC_hg19_v1_chr4_-_119273910 AJ001531 BC007761 NM_003619	-186863	-	TSC_hg19_v1_chr4_+_119199912 BC017993 BC039555	-260871	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	-505213	+	TSC_hg19_v1_chr4_+_119512929 AK024248	52146	+	TSC_hg19_v1_chr4_+_119606557 AK055555 AB046847 BC006565 BC007449 NM_020961 AB384254 CU675451	145823	+	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	296439	-	AJ001531|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC007761|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##NM_003619|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC017993|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##BC039555|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK024248|LOC729218|729218|uncharacterized LOC729218##AK055555|METTL14|57721|methyltransferase like 14##AB046847|METTL14|57721|methyltransferase like 14##BC006565|METTL14|57721|methyltransferase like 14##BC007449|METTL14|57721|methyltransferase like 14##NM_020961|METTL14|57721|methyltransferase like 14##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)	0.867028	CTCF.p2:-1:0.855
chr9	20621846	20621944	reg1026003.p2	4.307	+	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-834944	-	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-1212892	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-1241668	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	553	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	601	-	AK056522 AY139834 NM_017794	36412	+	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797	0.0	
chr10	43886305	43886419	reg1029456.p2	4.306	+	BC054876 AY358584 NM_001184963 NM_173160	-19272	+	BC022548 NM_145313	-123996	-	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	-252420	+	TSC_hg19_v1_chr10_-_43892200 NM_001098208	5857	-	TSC_hg19_v1_chr10_-_43892677 BC106008	6318	-	TSC_hg19_v1_chr10_-_43892706 NM_001098207	6383	-	BC054876|FXYD4|53828|FXYD domain containing ion transport regulator 4##AY358584|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001184963|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_173160|FXYD4|53828|FXYD domain containing ion transport regulator 4##BC022548|RASGEF1A|221002|RasGEF domain family, member 1A##NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A##AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##BC106008|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F##NM_001098207|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F	0.955757	CTCF.p2:-9:0.887
chr12	130511257	130511350	reg1026989.p1	4.306	+	BC114626 BC114936 NM_133448 AB061814	-123092	-	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	-1173216	+	BC043528 TSC_hg19_v1_chr12_+_129337985	-1173319	+	AK056047 TSC_hg19_v1_chr12_-_130646911	135553	-	TSC_hg19_v1_chr12_+_130647008 BC070037 NM_007197	135707	+	NM_001190971 NM_004764	311129	+	BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056047|FLJ31485|440119|uncharacterized LOC440119##BC070037|FZD10|11211|frizzled family receptor 10##NM_007197|FZD10|11211|frizzled family receptor 10##NM_001190971|PIWIL1|9271|piwi-like 1 (Drosophila)##NM_004764|PIWIL1|9271|piwi-like 1 (Drosophila)	0.996701	CTCF.p2:18:0.997
chr15	76102577	76102757	reg1012927.p2	4.306	+	TSC_hg19_v1_chr15_-_76030959 AK091244	-71698	-	TSC_hg19_v1_chr15_+_76016306 BC039862 NM_175881	-86353	+	TSC_hg19_v1_chr15_-_76005190 NM_001897	-97472	-	NM_173469 TSC_hg19_v1_chr15_+_76135647 AK000617	32968	+	TSC_hg19_v1_chr15_+_76135787 BC017708 AL832429	33125	+	TSC_hg19_v1_chr15_+_76135995 CU676032 AK294199	33371	+	AK091244|DNM1P35|100128285|DNM1 pseudogene 35##BC039862|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_175881|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_001897|CSPG4|1464|chondroitin sulfate proteoglycan 4##NM_173469|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK000617|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##BC017708|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AL832429|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK294199|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2	0.0	
chr4	83763937	83764033	reg1032439.p2	4.306	+	TSC_hg19_v1_chr4_-_83719926 BC004936 BC137429 BC137432 AF389338 AK024685 NM_001037582 NM_024906	-43996	-	AK301116 BC147019 BC147027 NM_001080506 AK297512	-280871	-	TSC_hg19_v1_chr4_+_83351969 AB528563 CR457141	-412016	+	TSC_hg19_v1_chr4_-_83812296 BC084583 AB018358 AB018359 BC031292 AK225934 BC143489 BC117221 BC143491 BC143492	48300	-	AK002161 CR933696 TSC_hg19_v1_chr4_-_83812319	48327	-	TSC_hg19_v1_chr4_-_83812330 AK295810	48343	-	BC004936|SCD5|79966|stearoyl-CoA desaturase 5##BC137429|SCD5|79966|stearoyl-CoA desaturase 5##BC137432|SCD5|79966|stearoyl-CoA desaturase 5##AF389338|SCD5|79966|stearoyl-CoA desaturase 5##AK024685|SCD5|79966|stearoyl-CoA desaturase 5##NM_001037582|SCD5|79966|stearoyl-CoA desaturase 5##NM_024906|SCD5|79966|stearoyl-CoA desaturase 5##AK301116|TMEM150C|441027|transmembrane protein 150C##BC147019|TMEM150C|441027|transmembrane protein 150C##BC147027|TMEM150C|441027|transmembrane protein 150C##NM_001080506|TMEM150C|441027|transmembrane protein 150C##AK297512|TMEM150C|441027|transmembrane protein 150C##CR457141|ENOPH1|58478|enolase-phosphatase 1##BC084583|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AB018358|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AB018359|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC031292|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK225934|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143489|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC117221|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143491|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC143492|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK002161|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##CR933696|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##AK295810|SEC31A|22872|SEC31 homolog A (S. cerevisiae)	0.998879	CTCF.p2:-26:0.999
chr8	28352601	28352675	reg1029545.p1	4.306	+	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	-873	+	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	-4859	-	AK002050 AK023418 NM_018660 AB057659 AB073627	-108677	-	TSC_hg19_v1_chr8_+_28559032 AB011091	206437	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	206512	+	TSC_hg19_v1_chr8_-_28747454 BC016687 AK225072 AK304525 AK298468 NM_001172562 BC025267 AK300593 AK295977 AK001733 AK225530	394822	-	NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##AB011091|EXTL3|2137|exostoses (multiple)-like 3##AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3##BC016687|INTS9|55756|integrator complex subunit 9##AK225072|INTS9|55756|integrator complex subunit 9##AK304525|INTS9|55756|integrator complex subunit 9##AK298468|INTS9|55756|integrator complex subunit 9##NM_001172562|INTS9|55756|integrator complex subunit 9##BC025267|INTS9|55756|integrator complex subunit 9##AK300593|INTS9|55756|integrator complex subunit 9##AK295977|INTS9|55756|integrator complex subunit 9##AK001733|INTS9|55756|integrator complex subunit 9##AK225530|INTS9|55756|integrator complex subunit 9	0.0	
chr9	126703084	126703183	reg1030165.p1	4.306	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-10822	-	NM_173689 AK123000 DQ426866 AY720432	-584640	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-672245	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	70750	+	TSC_hg19_v1_chr9_+_126774046 BC034458	70938	+	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	316877	+	BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC034458|LHX2|9355|LIM homeobox 2##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr9	16266776	16266902	reg1031566.p1	4.306	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-713818	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-755879	-	AF098483 AF098482 NM_021144	-756592	-	TSC_hg19_v1_chr9_-_16727889 AY438376	461058	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	603828	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	603927	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.305888	CTCF.p2:-10:0.306
chr10	72091284	72091417	reg1027704.p1	4.305	+	TSC_hg19_v1_chr10_-_72083680 AL122117	-7652	-	NM_022146	-47901	-	AF108211 AB590125 AF217186 DQ893597 AB026723 TSC_hg19_v1_chr10_-_71993148 BC107882 AF154065 BC105034 BC105036 AF092439 AF119665 BC001022 BC061581 AK058193 NM_021129	-98197	-	BC024001 AY358318 NM_207119	50030	-	AK094734 TSC_hg19_v1_chr10_-_72142380 AK001613 AK001706 NM_018205 NM_018239	51014	-	NM_004096 TSC_hg19_v1_chr10_+_72163879	72520	+	AL122117|LRRC20|55222|leucine rich repeat containing 20##NM_022146|NPFFR1|64106|neuropeptide FF receptor 1##AF108211|PPA1|5464|pyrophosphatase (inorganic) 1##AF217186|PPA1|5464|pyrophosphatase (inorganic) 1##DQ893597|PPA1|5464|pyrophosphatase (inorganic) 1##AB026723|PPA1|5464|pyrophosphatase (inorganic) 1##BC107882|PPA1|5464|pyrophosphatase (inorganic) 1##AF154065|PPA1|5464|pyrophosphatase (inorganic) 1##BC105034|PPA1|5464|pyrophosphatase (inorganic) 1##BC105036|PPA1|5464|pyrophosphatase (inorganic) 1##AF092439|PPA1|5464|pyrophosphatase (inorganic) 1##AF119665|PPA1|5464|pyrophosphatase (inorganic) 1##BC001022|PPA1|5464|pyrophosphatase (inorganic) 1##BC061581|PPA1|5464|pyrophosphatase (inorganic) 1##AK058193|PPA1|5464|pyrophosphatase (inorganic) 1##NM_021129|PPA1|5464|pyrophosphatase (inorganic) 1##BC024001|LRRC20|55222|leucine rich repeat containing 20##AY358318|LRRC20|55222|leucine rich repeat containing 20##NM_207119|LRRC20|55222|leucine rich repeat containing 20##AK094734|LRRC20|55222|leucine rich repeat containing 20##AK001613|LRRC20|55222|leucine rich repeat containing 20##AK001706|LRRC20|55222|leucine rich repeat containing 20##NM_018205|LRRC20|55222|leucine rich repeat containing 20##NM_018239|LRRC20|55222|leucine rich repeat containing 20##NM_004096|EIF4EBP2|1979|eukaryotic translation initiation factor 4E binding protein 2	0.41154	CTCF.p2:5:0.412
chr14	97908903	97909078	reg1028191.p2	4.305	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-645275	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-940206	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-940244	+	AK098639 NM_182560	1268959	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	1828627	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	1828900	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.325897	CTCF.p2:-47:0.326
chr1	57545512	57545693	reg1036179.p1	4.305	+	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	-113886	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	-225094	+	AK125198 NM_001004303 TSC_hg19_v1_chr1_-_57285379	-260229	-	TSC_hg19_v1_chr1_-_57888785 AK313144	343226	-	TSC_hg19_v1_chr1_-_58716179 CR933698 AB210012	1170580	-	TSC_hg19_v1_chr1_-_58716210 AK095513 NM_021080	1170607	-	HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##AK125198|C1orf168|199920|chromosome 1 open reading frame 168##NM_001004303|C1orf168|199920|chromosome 1 open reading frame 168##AK313144|DAB1|1600|disabled homolog 1 (Drosophila)##CR933698|DAB1|1600|disabled homolog 1 (Drosophila)##AB210012|DAB1|1600|disabled homolog 1 (Drosophila)##AK095513|DAB1|1600|disabled homolog 1 (Drosophila)##NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)	0.127066	
chr2	238612404	238612566	reg1026910.p1	4.305	+	TSC_hg19_v1_chr2_+_238601052 EU832771 EU832772 GQ129315 GQ129316	-11410	+	TSC_hg19_v1_chr2_+_238600975 AJ223075 BC001385 AK298270 U69609 BC108913 BC108914 AK307485	-11542	+	TSC_hg19_v1_chr2_+_238600798 BC018883 BC019335 NM_001137551 NM_001137552 NM_001137553 NM_004735	-11678	+	NM_001080504 TSC_hg19_v1_chr2_+_238707424 BX648107	94935	+	NM_005855 TSC_hg19_v1_chr2_+_238768265 AJ001014 BC000548 DQ891905 DQ895091 AY265457 CR542032 CR542044	155767	+	NM_080678 TSC_hg19_v1_chr2_+_238875655 AK002119 AK293334 AK297502 AK303094	263139	+	EU832771|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##EU832772|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129315|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129316|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AJ223075|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC001385|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK298270|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##U69609|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108913|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108914|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK307485|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC018883|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC019335|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137551|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137552|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137553|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_004735|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001080504|RBM44|375316|RNA binding motif protein 44##BX648107|RBM44|375316|RNA binding motif protein 44##NM_005855|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##AJ001014|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##BC000548|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##DQ891905|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##DQ895091|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##AY265457|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##CR542032|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##CR542044|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##NM_080678|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK293334|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK297502|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK303094|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)	0.0	
chr5	171433967	171434124	reg1031174.p2	4.305	+	BC026213 NM_012300 NM_033644 NM_033645	-169	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	-401	-	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	-517	-	AB015718 TSC_hg19_v1_chr5_-_171615170	181093	-	AK307943 TSC_hg19_v1_chr5_-_171615203	181158	-	TSC_hg19_v1_chr5_-_171615241 BC070077 AK313350	181228	-	BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB015718|STK10|6793|serine/threonine kinase 10##AK307943|STK10|6793|serine/threonine kinase 10##BC070077|STK10|6793|serine/threonine kinase 10##AK313350|STK10|6793|serine/threonine kinase 10	0.0	
chr8	52373813	52373967	reg1019928.p1	4.305	+	AJ003030 NM_018967	-1549294	+	NM_001007176 BC017981 AJ276240	-2388981	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-2539980	-	EU170240 AY877349 NM_144651	348063	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	437712	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	437837	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.256541	
chr9	114731481	114731662	reg1033490.p1	4.305	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-72104	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-72457	+	AL833535 NM_173521	-185796	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	205949	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	363716	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	364278	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chrX	118781984	118782164	reg1031924.p1	4.305	+	BC047878 BC068514 BC040379 AY208891 NM_001173487 NM_017544	-42246	-	EF165090 EF165091 EF165093 AJ011812 EF158333 EF216688 EF216689 NM_001173488	-55092	-	BC042021 NM_181777	-67777	+	D50918 AB384441 CU679289 CU680116 CU690318 TSC_hg19_v1_chrX_-_118827108 BC069231	45011	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	45058	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	45105	-	BC047878|NKRF|55922|NFKB repressing factor##BC068514|NKRF|55922|NFKB repressing factor##BC040379|NKRF|55922|NFKB repressing factor##AY208891|NKRF|55922|NFKB repressing factor##NM_001173487|NKRF|55922|NFKB repressing factor##NM_017544|NKRF|55922|NFKB repressing factor##EF165090|NKRF|55922|NFKB repressing factor##EF165091|NKRF|55922|NFKB repressing factor##EF165093|NKRF|55922|NFKB repressing factor##AJ011812|NKRF|55922|NFKB repressing factor##EF158333|NKRF|55922|NFKB repressing factor##EF216688|NKRF|55922|NFKB repressing factor##EF216689|NKRF|55922|NFKB repressing factor##NM_001173488|NKRF|55922|NFKB repressing factor##BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D50918|SEPT6|23157|septin 6##BC069231|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6	0.0	
chr11	30982082	30982167	reg1030910.p1	4.304	+	TSC_hg19_v1_chr11_-_30607762 AB209163 AK314833 NM_001145399	-374279	-	TSC_hg19_v1_chr11_-_30605748 AK309809	-376376	-	CU689190 NM_001584 U57911	-380145	-	BX647348 NM_020869	32108	-	AY247970 AK126066 NM_181807	409214	-	TSC_hg19_v1_chr11_+_31391404 NM_181706 AK123087 AL833128 AK289665 BC036571 BC044931 BC063804	409278	+	AB209163|MPPED2|744|metallophosphoesterase domain containing 2##AK314833|MPPED2|744|metallophosphoesterase domain containing 2##NM_001145399|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2##NM_001584|MPPED2|744|metallophosphoesterase domain containing 2##U57911|MPPED2|744|metallophosphoesterase domain containing 2##BX647348|DCDC5|100506627|doublecortin domain containing 5##NM_020869|DCDC5|100506627|doublecortin domain containing 5##AY247970|DCDC1|341019|doublecortin domain containing 1##NM_181807|DCDC1|341019|doublecortin domain containing 1##NM_181706|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK123087|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AL833128|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK289665|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC036571|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC044931|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC063804|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24	0.056956	
chr13	78706104	78706179	reg1030868.p1	4.304	+	D90402 NM_000115 S57283 AF308156	-156425	-	AF114165 NM_001201397	-212239	-	AF114163 AF114164 TSC_hg19_v1_chr13_-_78493569	-212590	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	464141	+	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	471582	-	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	527152	-	D90402|EDNRB|1910|endothelin receptor type B##NM_000115|EDNRB|1910|endothelin receptor type B##S57283|EDNRB|1910|endothelin receptor type B##AF114165|EDNRB|1910|endothelin receptor type B##NM_001201397|EDNRB|1910|endothelin receptor type B##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219	0.704462	CTCF.p2:2:0.704
chr17	1957417	1957580	reg1001342.p2	4.304	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-12190	+	TSC_hg19_v1_chr17_+_1933446 S81752 U34880 AF321876 NM_001383 AK314015 BC096086 BC096087 BC096088 BC096089 BC003099	-24077	+	BC128608 NM_178568	-29321	-	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	900	+	DQ187313 NM_001098202	2059	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	249314	-	NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##S81752|DPH1|1801|DPH1 homolog (S. cerevisiae)##U34880|DPH1|1801|DPH1 homolog (S. cerevisiae)##AF321876|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_001383|DPH1|1801|DPH1 homolog (S. cerevisiae)##AK314015|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096086|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096087|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096088|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096089|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC003099|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC128608|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_178568|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	0.0	
chr2	219757558	219757651	reg1030179.p2	4.304	+	BC052234 AK024363 NM_025216 BC040026	-12341	+	AY009401 NM_006522 AK075522 AB059570 DQ890770 BC004329 AB590154 BT007456	-32952	+	AJ249977 BC098102 BC098255 BC098277 BC098306 NM_017431 AK300078 AK300687 AK309865	-61086	-	TSC_hg19_v1_chr2_+_219824381 BC041771 NM_003936 U34051	66805	+	BC023511 NM_017521 Y08976	92721	-	AF166331 NM_005209 BC006285 NM_057093 NM_057094	100519	-	BC052234|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AK024363|WNT10A|80326|wingless-type MMTV integration site family, member 10A##NM_025216|WNT10A|80326|wingless-type MMTV integration site family, member 10A##BC040026|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AY009401|WNT6|7475|wingless-type MMTV integration site family, member 6##NM_006522|WNT6|7475|wingless-type MMTV integration site family, member 6##AK075522|WNT6|7475|wingless-type MMTV integration site family, member 6##AB059570|WNT6|7475|wingless-type MMTV integration site family, member 6##DQ890770|WNT6|7475|wingless-type MMTV integration site family, member 6##BC004329|WNT6|7475|wingless-type MMTV integration site family, member 6##BT007456|WNT6|7475|wingless-type MMTV integration site family, member 6##AJ249977|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098102|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098255|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098277|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098306|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##NM_017431|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300078|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300687|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK309865|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC041771|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##NM_003936|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##U34051|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##BC023511|FEV|54738|FEV (ETS oncogene family)##NM_017521|FEV|54738|FEV (ETS oncogene family)##Y08976|FEV|54738|FEV (ETS oncogene family)##AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2	0.0	
chr3	101426264	101426428	reg1028742.p1	4.304	+	CR456729 TSC_hg19_v1_chr3_-_101405541 BC070193 BC000690 M94314 AK311992 NM_000986	-20864	-	TSC_hg19_v1_chr3_-_101395977 BC111700 U69274 BC028062 AK312859 NM_014415	-30526	-	TSC_hg19_v1_chr3_+_101395318 BC016930	-31035	+	AK309806 AL833269 BC041085 NM_024548 AK294784	17121	+	NM_145037 TSC_hg19_v1_chr3_+_101498054	71702	+	TSC_hg19_v1_chr3_+_101498080 BC009431	71742	+	CR456729|RPL24|6152|ribosomal protein L24##BC070193|RPL24|6152|ribosomal protein L24##BC000690|RPL24|6152|ribosomal protein L24##M94314|RPL24|6152|ribosomal protein L24##AK311992|RPL24|6152|ribosomal protein L24##NM_000986|RPL24|6152|ribosomal protein L24##BC111700|ZBTB11|27107|zinc finger and BTB domain containing 11##U69274|ZBTB11|27107|zinc finger and BTB domain containing 11##BC028062|ZBTB11|27107|zinc finger and BTB domain containing 11##AK312859|ZBTB11|27107|zinc finger and BTB domain containing 11##NM_014415|ZBTB11|27107|zinc finger and BTB domain containing 11##BC016930|LOC100009676|100009676|uncharacterized LOC100009676##AK309806|CEP97|79598|centrosomal protein 97kDa##AL833269|CEP97|79598|centrosomal protein 97kDa##BC041085|CEP97|79598|centrosomal protein 97kDa##NM_024548|CEP97|79598|centrosomal protein 97kDa##AK294784|CEP97|79598|centrosomal protein 97kDa##NM_145037|FAM55C|91775|family with sequence similarity 55, member C##BC009431|FAM55C|91775|family with sequence similarity 55, member C	0.048041	
chr7	151843213	151843319	reg1030186.p1	4.304	+	TSC_hg19_v1_chr7_+_151722852 AK025287	-120414	+	TSC_hg19_v1_chr7_+_151722826 AK298911	-120434	+	TSC_hg19_v1_chr7_+_151722782 NM_022087	-120469	+	TSC_hg19_v1_chr7_-_152133040 AY024361	289726	-	TSC_hg19_v1_chr7_-_152133074 NM_170606	289815	-	TSC_hg19_v1_chr7_+_152161285 BC036622	317973	+	AK025287|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)##AK298911|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)##NM_022087|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)##AY024361|MLL3|58508|myeloid/lymphoid or mixed-lineage leukemia 3##NM_170606|MLL3|58508|myeloid/lymphoid or mixed-lineage leukemia 3##BC036622|LOC100128822|100128822|uncharacterized LOC100128822	0.97326	CTCF.p2:4:0.973
chr8	27181929	27182067	reg1000967.p3	4.304	+	NM_004103 D45853 U43522	-2075	+	TSC_hg19_v1_chr8_+_27169015 BC036651 NM_173174	-12997	+	TSC_hg19_v1_chr8_-_27168793 AB029021 AF492463 BC018337 NM_171982	-13190	-	NM_173176 TSC_hg19_v1_chr8_+_27183022	1019	+	TSC_hg19_v1_chr8_+_27183049 BC042599	1054	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	1079	+	NM_004103|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##D45853|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##U43522|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC036651|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173174|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB029021|TRIM35|23087|tripartite motif containing 35##AF492463|TRIM35|23087|tripartite motif containing 35##BC018337|TRIM35|23087|tripartite motif containing 35##NM_171982|TRIM35|23087|tripartite motif containing 35##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta	0.0	
chr1	27648504	27648677	reg1029932.p1	4.303	+	TSC_hg19_v1_chr1_+_27561153 BC032523	-87428	+	TSC_hg19_v1_chr1_+_27561124 AK315564	-87463	+	NM_015023 TSC_hg19_v1_chr1_+_27561056	-87556	+	TSC_hg19_v1_chr1_+_27648669 NM_032125 AK313110 AK303821	61	+	AL136683 BC011579 BC090039 TSC_hg19_v1_chr1_+_27648745	143	+	TSC_hg19_v1_chr1_+_27648756 EU831420 EU831513 AF251699 AK222642 AK307077 BX648289	226	+	BC032523|WDTC1|23038|WD and tetratricopeptide repeats 1##AK315564|WDTC1|23038|WD and tetratricopeptide repeats 1##NM_015023|WDTC1|23038|WD and tetratricopeptide repeats 1##NM_032125|TMEM222|84065|transmembrane protein 222##AK313110|TMEM222|84065|transmembrane protein 222##AK303821|TMEM222|84065|transmembrane protein 222##AL136683|TMEM222|84065|transmembrane protein 222##BC011579|TMEM222|84065|transmembrane protein 222##BC090039|TMEM222|84065|transmembrane protein 222##EU831420|TMEM222|84065|transmembrane protein 222##EU831513|TMEM222|84065|transmembrane protein 222##AF251699|TMEM222|84065|transmembrane protein 222##AK222642|TMEM222|84065|transmembrane protein 222##AK307077|TMEM222|84065|transmembrane protein 222##BX648289|LOC644961|644961|actin, beta pseudogene	0.0	
chr13	21608811	21608919	reg1027466.p1	4.303	+	TSC_hg19_v1_chr13_-_21476909 NM_022459	-131928	-	BC050680 AB051508 AB384273 AK057924 BC098402 TSC_hg19_v1_chr13_-_21476886 AK302760	-131995	-	TSC_hg19_v1_chr13_-_21348081 AK055408 AK316604	-260778	-	TSC_hg19_v1_chr13_-_21635685 BC127671 AF207547 AB209897 BC071572	26800	-	TSC_hg19_v1_chr13_-_21635719 NM_014572	26851	-	NM_005870 TSC_hg19_v1_chr13_+_21714679	105802	+	NM_022459|XPO4|64328|exportin 4##BC050680|XPO4|64328|exportin 4##AB051508|XPO4|64328|exportin 4##AK057924|XPO4|64328|exportin 4##BC098402|XPO4|64328|exportin 4##AK302760|XPO4|64328|exportin 4##AK316604|N6AMT2|221143|N-6 adenine-specific DNA methyltransferase 2 (putative)##BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##NM_005870|SAP18|10284|Sin3A-associated protein, 18kDa	0.029517	
chr16	88658304	88658457	reg1025832.p2	4.303	+	TSC_hg19_v1_chr16_+_88636880 BC050463	-21511	+	AK056632 AK225807 TSC_hg19_v1_chr16_+_88636823	-21552	+	AK300254 AK302716 TSC_hg19_v1_chr16_+_88636810	-21570	+	AF152099 AY358471 BC069410 NM_013278 BC101835 BC112196 AF142410	46623	+	AK097127 AK125578 AK300049 AK309030 TSC_hg19_v1_chr16_-_88717462 BT006861 DQ893235 DQ896565 AB590173 BC048338 BC033739 BC006465 BC011565 BC028224 M21186 NM_000101	59069	-	BT006930 AB527587 DQ890562 DQ893724 TSC_hg19_v1_chr16_-_88729519 NM_002461 U49260 AB209229 BC000011	71137	-	BC050463|ZC3H18|124245|zinc finger CCCH-type containing 18##AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18##AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18##AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18##AF152099|IL17C|27189|interleukin 17C##AY358471|IL17C|27189|interleukin 17C##BC069410|IL17C|27189|interleukin 17C##NM_013278|IL17C|27189|interleukin 17C##BC101835|IL17C|27189|interleukin 17C##BC112196|IL17C|27189|interleukin 17C##AK097127|CYBA|1535|cytochrome b-245, alpha polypeptide##AK300049|CYBA|1535|cytochrome b-245, alpha polypeptide##BT006861|CYBA|1535|cytochrome b-245, alpha polypeptide##DQ893235|CYBA|1535|cytochrome b-245, alpha polypeptide##DQ896565|CYBA|1535|cytochrome b-245, alpha polypeptide##BC033739|CYBA|1535|cytochrome b-245, alpha polypeptide##BC006465|CYBA|1535|cytochrome b-245, alpha polypeptide##BC011565|CYBA|1535|cytochrome b-245, alpha polypeptide##BC028224|CYBA|1535|cytochrome b-245, alpha polypeptide##M21186|CYBA|1535|cytochrome b-245, alpha polypeptide##NM_000101|CYBA|1535|cytochrome b-245, alpha polypeptide##BT006930|MVD|4597|mevalonate (diphospho) decarboxylase##DQ890562|MVD|4597|mevalonate (diphospho) decarboxylase##DQ893724|MVD|4597|mevalonate (diphospho) decarboxylase##NM_002461|MVD|4597|mevalonate (diphospho) decarboxylase##U49260|MVD|4597|mevalonate (diphospho) decarboxylase##AB209229|MVD|4597|mevalonate (diphospho) decarboxylase##BC000011|MVD|4597|mevalonate (diphospho) decarboxylase	0.0	
chr17	70427242	70427422	reg1030335.p2	4.303	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-310092	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-310162	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-310173	+	AK000477 TSC_hg19_v1_chr17_-_70588944	161611	-	AF331643 TSC_hg19_v1_chr17_-_71088816	661484	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	661491	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr19	40649706	40649783	reg1029744.p1	4.303	+	TSC_hg19_v1_chr19_-_40596843 AK091274 AX746890 NM_001010880 AK131328 BC021982 NM_001142577 NM_001142578 NM_001142579	-52932	-	TSC_hg19_v1_chr19_-_40562138 AK127063 NM_001005851	-87618	-	NM_178544 AK122968 AK292528 BC045649	-146759	+	TSC_hg19_v1_chr19_+_40697520 NM_002446 X90846 Z48615	47902	+	TSC_hg19_v1_chr19_-_40724275 AK054935 AK289550 BC029539 NM_152479	74544	-	AK023327 AK301833 NM_024877	82835	-	AK091274|ZNF780A|284323|zinc finger protein 780A##NM_001010880|ZNF780A|284323|zinc finger protein 780A##AK131328|ZNF780A|284323|zinc finger protein 780A##BC021982|ZNF780A|284323|zinc finger protein 780A##NM_001142577|ZNF780A|284323|zinc finger protein 780A##NM_001142578|ZNF780A|284323|zinc finger protein 780A##NM_001142579|ZNF780A|284323|zinc finger protein 780A##AK127063|ZNF780B|163131|zinc finger protein 780B##NM_001005851|ZNF780B|163131|zinc finger protein 780B##NM_178544|ZNF546|339327|zinc finger protein 546##AK122968|ZNF546|339327|zinc finger protein 546##AK292528|ZNF546|339327|zinc finger protein 546##BC045649|ZNF546|339327|zinc finger protein 546##NM_002446|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##X90846|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##Z48615|MAP3K10|4294|mitogen-activated protein kinase kinase kinase 10##AK054935|TTC9B|148014|tetratricopeptide repeat domain 9B##AK289550|TTC9B|148014|tetratricopeptide repeat domain 9B##BC029539|TTC9B|148014|tetratricopeptide repeat domain 9B##NM_152479|TTC9B|148014|tetratricopeptide repeat domain 9B##AK023327|CNTD2|79935|cyclin N-terminal domain containing 2##AK301833|CNTD2|79935|cyclin N-terminal domain containing 2##NM_024877|CNTD2|79935|cyclin N-terminal domain containing 2	0.0	
chr20	30310693	30310820	reg1035469.p1	4.303	+	TSC_hg19_v1_chr20_-_30310672 AY263336 BC019307 NM_001191 NM_138578 AK290968 AY263335 CR936637	-90	-	BC032024 TSC_hg19_v1_chr20_-_30288101	-22659	-	AF257180 NM_032609 BC057779	-85054	+	TSC_hg19_v1_chr20_-_30311772 BX647525	984	-	NM_012112 TSC_hg19_v1_chr20_+_30327092 AK312549 AB024704 AF098158 AF287265 BC020207 BC004136	16281	+	AJ272502 BC092413 NM_033118 BX647635	96428	+	AY263336|BCL2L1|598|BCL2-like 1##BC019307|BCL2L1|598|BCL2-like 1##NM_001191|BCL2L1|598|BCL2-like 1##NM_138578|BCL2L1|598|BCL2-like 1##AK290968|BCL2L1|598|BCL2-like 1##AY263335|BCL2L1|598|BCL2-like 1##CR936637|BCL2L1|598|BCL2-like 1##AF257180|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_032609|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##BC057779|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##BX647525|BCL2L1|598|BCL2-like 1##NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AJ272502|MYLK2|85366|myosin light chain kinase 2##BC092413|MYLK2|85366|myosin light chain kinase 2##NM_033118|MYLK2|85366|myosin light chain kinase 2##BX647635|MYLK2|85366|myosin light chain kinase 2	0.380821	CTCF.p2:-1:0.381
chr2	42555677	42555818	reg1031106.p1	4.303	+	TSC_hg19_v1_chr2_+_42396514 AB275889 NM_001145076 NM_019063 AK314702 BC146799 AF177377 BC067777 BC104647 BC140845 AB374363 AB462412 AB384933	-159172	+	AB528999 TSC_hg19_v1_chr2_+_42275979	-279786	+	TSC_hg19_v1_chr2_+_42275160 NM_138370	-280615	+	AF127788 BT007371 CR542208 CU675543 DQ890566 DQ893729 TSC_hg19_v1_chr2_-_42588354 AB007618 BC005251 BC007095 NM_004718	32586	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	164811	-	TSC_hg19_v1_chr2_-_42721118 AF454547 AF454548 BC071558 AF348982 NM_133329 NM_172344	165456	-	NM_001145076|EML4|27436|echinoderm microtubule associated protein like 4##NM_019063|EML4|27436|echinoderm microtubule associated protein like 4##AK314702|EML4|27436|echinoderm microtubule associated protein like 4##BC146799|EML4|27436|echinoderm microtubule associated protein like 4##AF177377|EML4|27436|echinoderm microtubule associated protein like 4##BC067777|EML4|27436|echinoderm microtubule associated protein like 4##BC104647|EML4|27436|echinoderm microtubule associated protein like 4##BC140845|EML4|27436|echinoderm microtubule associated protein like 4##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)##AF127788|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BT007371|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##CR542208|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ890566|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ893729|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB007618|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC005251|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC007095|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##NM_004718|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF454547|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF454548|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##BC071558|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF348982|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##NM_133329|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##NM_172344|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3	0.995698	CTCF.p2:13:0.996
chr7	23610554	23610734	reg1000997.p2	4.303	+	CU677835 DQ892442 DQ895653 AB528532 TSC_hg19_v1_chr7_-_23571604 BC069011 BC017094 U53209 AB097048 AK300565 AK311687 AK314801 AK300741 AK310719 AK298815 NM_013293	-39080	-	TSC_hg19_v1_chr7_+_23530136 BC026177	-80477	+	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	-100646	-	TSC_hg19_v1_chr7_+_23637005 NM_138771 AK289911 AY358713 AX721042	26371	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	109179	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	139272	+	DQ892442|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##DQ895653|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC069011|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC017094|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##U53209|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AB097048|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK300565|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK311687|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK314801|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK300741|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK310719|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK298815|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##NM_013293|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_138771|CCDC126|90693|coiled-coil domain containing 126##AK289911|CCDC126|90693|coiled-coil domain containing 126##AY358713|CCDC126|90693|coiled-coil domain containing 126##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31	0.0	
chr10	102098533	102098714	reg1001139.p2	4.302	+	AF073481 NM_001253837 NM_016112	-8381	-	AY531265 AB463442 TSC_hg19_v1_chr10_-_102046438 AB593084 AK298969 NM_173809	-52185	-	BC020494 AY278457 AK054697 NM_001001342	-52593	-	NM_005063 TSC_hg19_v1_chr10_+_102106877 AB032261 BC062303	8218	+	TSC_hg19_v1_chr10_+_102106989 AK312312	8352	+	TSC_hg19_v1_chr10_+_102107054 AB208982 AF097514 AK222862 Y13647	8406	+	AF073481|PKD2L1|9033|polycystic kidney disease 2-like 1##NM_001253837|PKD2L1|9033|polycystic kidney disease 2-like 1##NM_016112|PKD2L1|9033|polycystic kidney disease 2-like 1##AY531265|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AB593084|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AK298969|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_173809|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AK312312|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AB208982|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AF097514|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AK222862|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##Y13647|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	0.0	
chr15	61087896	61088076	reg1021047.p1	4.302	+	U04899 U04898 NM_002943 NM_134260	-168301	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	-203307	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-316712	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	433438	-	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	433511	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	1264628	-	U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	0.0	
chr15	92634489	92634594	reg1032220.p1	4.302	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-236974	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	-237444	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	-237598	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	302658	+	AK057393 NM_153040	380365	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	564338	-	AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B	0.986202	CTCF.p2:5:0.986
chr16	28921930	28922089	reg1035374.p2	4.302	+	TSC_hg19_v1_chr16_+_28891234 AK128456	-30706	+	BX647367 NM_004320 NM_173201 TSC_hg19_v1_chr16_+_28889808 BX537784 BX537389 BX647365 BX648544 BC104452 BC104453 BX647366 BX649072 AK291314 BC037354 AB527323	-32109	+	TSC_hg19_v1_chr16_+_28877593 BC010704	-44420	+	AY129017 TSC_hg19_v1_chr16_-_28936536 AK295229 BC046118 AK026935 NM_024816 BC058900	14499	-	NM_001178098 NM_001770 BC006338 AK301363 AK313577 BC052294 M21097 X13312 AK307295 M28170 DQ893016 DQ896261 AK130657 AK301167 AK304456	21293	+	BC068007 BC101741 BC112182 TSC_hg19_v1_chr16_+_28962327 AF458593 NM_032815 AK074761 AK304172	40229	+	AK128456|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX647367|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##NM_004320|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##NM_173201|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX537784|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX537389|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX647365|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX648544|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC104452|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC104453|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX647366|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX649072|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##AK291314|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC037354|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC010704|SH2B1|25970|SH2B adaptor protein 1##AK295229|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC046118|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##AK026935|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##NM_024816|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC058900|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##NM_001178098|CD19|930|CD19 molecule##NM_001770|CD19|930|CD19 molecule##BC006338|CD19|930|CD19 molecule##AK301363|CD19|930|CD19 molecule##AK313577|CD19|930|CD19 molecule##BC052294|CD19|930|CD19 molecule##M21097|CD19|930|CD19 molecule##X13312|CD19|930|CD19 molecule##AK307295|CD19|930|CD19 molecule##DQ893016|CD19|930|CD19 molecule##DQ896261|CD19|930|CD19 molecule##AK130657|CD19|930|CD19 molecule##AK301167|CD19|930|CD19 molecule##AK304456|CD19|930|CD19 molecule##BC068007|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC101741|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC112182|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AF458593|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##NM_032815|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK074761|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK304172|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein	0.0	
chr22	39513622	39513803	reg1008815.p1	4.302	+	NM_001166002 NM_001166003 NM_001166004 NM_181773 BC069023 CR456481	-20442	+	AK092614 NM_021822 AK315650 BC061914 AF182420 CR456472 BC009683 BC024268 AB266487 AB462950 CU013022 CU013310 CU692904 JF262036	-40525	+	AK294810 NM_001006666 NM_145298	-77072	+	TSC_hg19_v1_chr22_-_39529023 BC128418	15335	-	DQ064603 AB528611 EU446785 CU690844 BC051773 TSC_hg19_v1_chr22_-_39548584 NM_175709 AK124408	34855	-	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	123197	-	NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##AK092614|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_021822|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK315650|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC061914|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AF182420|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CR456472|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC009683|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC024268|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AB266487|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013022|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013310|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##JF262036|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK294810|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_001006666|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_145298|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##BC128418|CBX7|23492|chromobox homolog 7##DQ064603|CBX7|23492|chromobox homolog 7##EU446785|CBX7|23492|chromobox homolog 7##BC051773|CBX7|23492|chromobox homolog 7##NM_175709|CBX7|23492|chromobox homolog 7##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide	0.0	
chr3	37875424	37875550	reg1034738.p2	4.302	+	TSC_hg19_v1_chr3_+_37493631 BC030198 D25303 NM_002207 L24158	-381733	+	NM_178339 NM_178342 AJ493604 AJ493603	-434473	+	TSC_hg19_v1_chr3_+_37284761 BC045543 NM_001172713 NM_002078 BC050444 AK290550 BC023648 AK300192 AK307429 AB209693 U41740 X82834	-590724	+	TSC_hg19_v1_chr3_+_37903656 AJ575644 AJ575645 NM_001008392 NM_005808 AY279532 AY364238	28179	+	TSC_hg19_v1_chr3_+_38032276 BC004300	156789	+	NM_015873	159590	+	BC030198|ITGA9|3680|integrin, alpha 9##D25303|ITGA9|3680|integrin, alpha 9##NM_002207|ITGA9|3680|integrin, alpha 9##L24158|ITGA9|3680|integrin, alpha 9##NM_178339|C3orf35|339883|chromosome 3 open reading frame 35##NM_178342|C3orf35|339883|chromosome 3 open reading frame 35##AJ493604|C3orf35|339883|chromosome 3 open reading frame 35##AJ493603|C3orf35|339883|chromosome 3 open reading frame 35##BC045543|GOLGA4|2803|golgin A4##NM_001172713|GOLGA4|2803|golgin A4##NM_002078|GOLGA4|2803|golgin A4##BC050444|GOLGA4|2803|golgin A4##AK290550|GOLGA4|2803|golgin A4##BC023648|GOLGA4|2803|golgin A4##AK300192|GOLGA4|2803|golgin A4##AK307429|GOLGA4|2803|golgin A4##AB209693|GOLGA4|2803|golgin A4##U41740|GOLGA4|2803|golgin A4##X82834|GOLGA4|2803|golgin A4##AJ575644|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AJ575645|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_001008392|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_005808|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY279532|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY364238|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##BC004300|VILL|50853|villin-like##NM_015873|VILL|50853|villin-like	0.0	
chr5	175294947	175295053	reg1030564.p1	4.302	+	TSC_hg19_v1_chr5_+_175223538 NM_006650 U35100	-71436	+	NM_022304	-186537	+	TSC_hg19_v1_chr5_+_175085101 AB023487	-209889	+	TSC_hg19_v1_chr5_+_175298517 AY576870 NM_001008220 AK124837	3509	+	TSC_hg19_v1_chr5_+_175298551 AK314177	3545	+	TSC_hg19_v1_chr5_+_175298607 AK293819	3610	+	NM_006650|CPLX2|10814|complexin 2##U35100|CPLX2|10814|complexin 2##NM_022304|HRH2|3274|histamine receptor H2##AB023487|HRH2|3274|histamine receptor H2##AY576870|CPLX2|10814|complexin 2##NM_001008220|CPLX2|10814|complexin 2##AK124837|CPLX2|10814|complexin 2##AK314177|CPLX2|10814|complexin 2##AK293819|CPLX2|10814|complexin 2	0.0	
chr6	89351368	89351547	reg1030320.p2	4.302	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-475691	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-496421	-	BC029488 NM_030960 AF203447	-593927	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	321734	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	321851	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	321890	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.0	
chr7	121170606	121170787	reg1028126.p2	4.302	+	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	-134282	-	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	-134359	-	AF169963 NM_057168	-201607	+	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	342465	+	TSC_hg19_v1_chr7_+_121513214 U88967	342525	+	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	613593	-	AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase	0.0	
chr7	17166703	17166883	reg1027420.p2	4.302	+	AY359065 BC058284 NM_176813	-245189	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-322122	-	TSC_hg19_v1_chr7_+_16793401 AK093487 NM_014399 AK026587 AK075475 AK316595 AY358995 AF100759 BC033863 AF120265 DQ892059 DQ895252 CR542107	-373337	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	171476	+	TSC_hg19_v1_chr7_+_17382906 BC021696	216113	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	813256	-	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK093487|TSPAN13|27075|tetraspanin 13##NM_014399|TSPAN13|27075|tetraspanin 13##AK026587|TSPAN13|27075|tetraspanin 13##AK075475|TSPAN13|27075|tetraspanin 13##AK316595|TSPAN13|27075|tetraspanin 13##AY358995|TSPAN13|27075|tetraspanin 13##AF100759|TSPAN13|27075|tetraspanin 13##BC033863|TSPAN13|27075|tetraspanin 13##AF120265|TSPAN13|27075|tetraspanin 13##DQ892059|TSPAN13|27075|tetraspanin 13##DQ895252|TSPAN13|27075|tetraspanin 13##CR542107|TSPAN13|27075|tetraspanin 13##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13	0.0	
chr8	128413045	128413168	reg1036116.p1	4.302	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-842382	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-842551	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1449693	-	DQ486513 NM_001159542	14750	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	335219	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	335384	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.994132	CTCF.p2:-8:0.994
chr10	76737823	76738004	reg1033010.p2	4.301	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-151559	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-801326	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-801383	+	AY686755 NM_001003892 BC137321 BC137322	80392	-	AB027004 AB103375 NM_016364	121334	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	131001	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr11	118663383	118663524	reg1029168.p3	4.301	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-1519	-	TSC_hg19_v1_chr11_-_118661865 Z11685	-1574	-	TSC_hg19_v1_chr11_-_118661860 BC026228	-1594	-	AK291512 NM_001716 BC110352 X68149 AB464488	91107	+	NM_032966 X68829	100647	+	AB094091 NM_182557	118159	-	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like	0.0	
chr12	66079446	66079539	reg1028288.p1	4.301	+	TSC_hg19_v1_chr12_+_65672705 NM_001193461	-406768	+	NM_001031679 NM_001193460 NM_198080 TSC_hg19_v1_chr12_+_65672483 AK316365 AK293084 AK299065 AY358229 BX648776 AL833622 BC040053	-406967	+	TSC_hg19_v1_chr12_+_65563362 AK312473 NM_001167614 NM_014319 AK304317 AF112299	-516138	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	138715	+	TSC_hg19_v1_chr12_+_66218605 AK311399	139115	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	139521	+	NM_001193461|MSRB3|253827|methionine sulfoxide reductase B3##NM_001031679|MSRB3|253827|methionine sulfoxide reductase B3##NM_001193460|MSRB3|253827|methionine sulfoxide reductase B3##NM_198080|MSRB3|253827|methionine sulfoxide reductase B3##AK316365|MSRB3|253827|methionine sulfoxide reductase B3##AK293084|MSRB3|253827|methionine sulfoxide reductase B3##AK299065|MSRB3|253827|methionine sulfoxide reductase B3##AY358229|MSRB3|253827|methionine sulfoxide reductase B3##BX648776|MSRB3|253827|methionine sulfoxide reductase B3##AL833622|MSRB3|253827|methionine sulfoxide reductase B3##BC040053|MSRB3|253827|methionine sulfoxide reductase B3##AK312473|LEMD3|23592|LEM domain containing 3##NM_001167614|LEMD3|23592|LEM domain containing 3##NM_014319|LEMD3|23592|LEM domain containing 3##AK304317|LEMD3|23592|LEM domain containing 3##AF112299|LEMD3|23592|LEM domain containing 3##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2	0.929287	CTCF.p2:17:0.929
chr1	94095326	94095445	reg1002348.p2	4.301	+	TSC_hg19_v1_chr1_+_94057602 BC084562	-37778	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-37845	+	TSC_hg19_v1_chr1_+_93913680 NM_001024948 NM_001164473 NM_017737 AY514449	-181663	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	51942	-	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	249329	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	249363	-	BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##NM_001024948|FNBP1L|54874|formin binding protein 1-like##NM_001164473|FNBP1L|54874|formin binding protein 1-like##NM_017737|FNBP1L|54874|formin binding protein 1-like##AY514449|FNBP1L|54874|formin binding protein 1-like##U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2	0.0	
chr20	37434146	37434214	reg1033506.p1	4.301	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	-57068	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-81021	+	NM_080552 TSC_hg19_v1_chr20_+_37353115	-81068	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	174	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	120809	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	120888	+	BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##NM_080552|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D	0.0	
chr2	153032251	153032432	reg1011724.p2	4.301	+	TSC_hg19_v1_chr2_-_152955813 AK291378	-76530	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	-76794	-	AK294398 AK316045 TSC_hg19_v1_chr2_-_152955250 NM_001005746	-77111	-	TSC_hg19_v1_chr2_-_153032266 AB463258 AM393419 CU688564 DQ892427 DQ895641 AK292265 AK292847 AK310863 AF042273 AF042274 AL133600 BC022277 BC028740 NM_005843	9	-	TSC_hg19_v1_chr2_+_153191687 NM_052905	159329	+	BC113878 BC114438 TSC_hg19_v1_chr2_+_153191857 AB067489 BC167159 AB385514	159632	+	AK291378|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##NM_052905|FMNL2|114793|formin-like 2##BC113878|FMNL2|114793|formin-like 2##BC114438|FMNL2|114793|formin-like 2##AB067489|FMNL2|114793|formin-like 2##BC167159|FMNL2|114793|formin-like 2	0.0	
chr4	154419655	154419802	reg1028118.p1	4.301	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-32236	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-153853	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-153941	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	185670	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	185702	+	TSC_hg19_v1_chr4_+_154605441 BC033756	185736	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.0	
chr7	2340917	2340983	reg1029633.p2	4.301	+	BC065367 AB025238 AB025239 AB025242 NM_198953 NM_198954 BC022818 BC040144 CU677071	-58417	+	AB025233 NM_002452 NM_198948 NM_198949 BC051375 AB025234 AB025235 AB025240 BC014618 AK026631 AB025236 AB025237 AB025241 NM_198950 NM_198952	-59075	+	TSC_hg19_v1_chr7_-_2281824 BC017181 AF093415 NM_013393 AK302060	-59117	-	TSC_hg19_v1_chr7_-_2354018 BC007785	13074	-	TSC_hg19_v1_chr7_-_2354077 CU692368 DQ892508 DQ895722 AK074544 AF121858 AK315670 BC021565 NM_013321	13124	-	TSC_hg19_v1_chr7_+_2394488 NM_001037283 NM_003751 AK302058	53512	+	BC065367|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025238|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025239|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025242|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198953|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198954|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC022818|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC040144|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025233|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_002452|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198948|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198949|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC051375|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025234|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025235|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025240|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC014618|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AK026631|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025236|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025237|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025241|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198950|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198952|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC017181|FTSJ2|29960|FtsJ homolog 2 (E. coli)##AF093415|FTSJ2|29960|FtsJ homolog 2 (E. coli)##NM_013393|FTSJ2|29960|FtsJ homolog 2 (E. coli)##AK302060|FTSJ2|29960|FtsJ homolog 2 (E. coli)##BC007785|SNX8|29886|sorting nexin 8##DQ892508|SNX8|29886|sorting nexin 8##DQ895722|SNX8|29886|sorting nexin 8##AK074544|SNX8|29886|sorting nexin 8##AF121858|SNX8|29886|sorting nexin 8##AK315670|SNX8|29886|sorting nexin 8##BC021565|SNX8|29886|sorting nexin 8##NM_013321|SNX8|29886|sorting nexin 8##NM_001037283|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##NM_003751|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##AK302058|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B	0.753783	CTCF.p2:2:0.754
chr12	129309269	129309357	reg1028367.p2	4.300	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	-870	-	NM_001136103	-557366	+	NM_052907	-3498152	+	BC043528 TSC_hg19_v1_chr12_+_129337985	28671	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	28774	+	BC114626 BC114936 NM_133448 AB061814	1078898	-	BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D	0.283838	CTCF.p2:-20:0.284
chr12	85013023	85013089	reg1041911.p1	4.300	+	TSC_hg19_v1_chr12_+_83081158 AK299771 BC093852 BC143378 BC093854 AK315285 AB463319 AM393141	-1931795	+	TSC_hg19_v1_chr12_+_83080911 AL834509 NM_152588	-1932139	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	-1932356	+	AK291207 AK022853 TSC_hg19_v1_chr12_-_85306547	293487	-	TSC_hg19_v1_chr12_-_85306575 BC022253 BC070040	293516	-	AK294945 TSC_hg19_v1_chr12_-_85306581 NM_001146335 NM_018057 NM_182767	293536	-	AK299771|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093852|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC143378|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC093854|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK315285|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AM393141|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AL834509|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##NM_152588|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##AK291207|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK022853|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC022253|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##BC070040|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##AK294945|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_001146335|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_018057|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15##NM_182767|SLC6A15|55117|solute carrier family 6 (neutral amino acid transporter), member 15	0.990271	CTCF.p2:-15:0.990
chr15	58043554	58043644	reg1030902.p1	4.300	+	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	-44619	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	-44713	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	-159434	+	AB015228 AB015227 NM_170697	262640	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	314279	-	NM_001206897 NM_003888 NM_170696	314521	-	AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	0.207771	CTCF.p2:0:0.208
chr17	17773781	17773904	reg1029943.p1	4.300	+	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	-33518	-	TSC_hg19_v1_chr17_-_17740301 U00968 BC063281	-33547	-	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	-46938	-	TSC_hg19_v1_chr17_-_17875715 AK124331 AK295111 AK301944 AK303305 AK299872 AF467441 BC051650 AK294846 NM_001033551 NM_001082968	101899	-	NM_001130090 NM_001130091 NM_001130092 NM_031294 TSC_hg19_v1_chr17_+_17876186 BC047873 AL136926 AK293011 BC040276 BC050419 BC050665 AK093317 AX748051	102358	+	AM393241 CU678578 CU689282 AB528073 AF070584 BC032126 AF052185 AY203943 TSC_hg19_v1_chr17_-_17942481 BC004114 NM_145691 AK290257 AK294487 AK296382	168561	-	BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1##U00968|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC063281|SREBF1|6720|sterol regulatory element binding transcription factor 1##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK124331|TOM1L2|146691|target of myb1-like 2 (chicken)##AK295111|TOM1L2|146691|target of myb1-like 2 (chicken)##AK301944|TOM1L2|146691|target of myb1-like 2 (chicken)##AK303305|TOM1L2|146691|target of myb1-like 2 (chicken)##AK299872|TOM1L2|146691|target of myb1-like 2 (chicken)##AF467441|TOM1L2|146691|target of myb1-like 2 (chicken)##BC051650|TOM1L2|146691|target of myb1-like 2 (chicken)##AK294846|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001033551|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001082968|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001130090|LRRC48|83450|leucine rich repeat containing 48##NM_001130091|LRRC48|83450|leucine rich repeat containing 48##NM_001130092|LRRC48|83450|leucine rich repeat containing 48##NM_031294|LRRC48|83450|leucine rich repeat containing 48##BC047873|LRRC48|83450|leucine rich repeat containing 48##AL136926|LRRC48|83450|leucine rich repeat containing 48##AK293011|LRRC48|83450|leucine rich repeat containing 48##BC040276|LRRC48|83450|leucine rich repeat containing 48##BC050419|LRRC48|83450|leucine rich repeat containing 48##BC050665|LRRC48|83450|leucine rich repeat containing 48##AK093317|LRRC48|83450|leucine rich repeat containing 48##AM393241|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF070584|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC032126|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF052185|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AY203943|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC004114|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_145691|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK290257|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK294487|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2	0.050446	
chr20	38305723	38305866	reg1030935.p1	4.300	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-714805	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-750726	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-750805	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1012083	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1351700	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1351870	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.0	
chr2	231808430	231808582	reg1036372.p1	4.300	+	BC032694 NM_005683	-18566	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-78784	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-78828	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	52386	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	93731	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	113071	+	BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.0	
chr2	95743295	95743391	reg1014589.p3	4.300	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	-51861	+	AK097438 BC021716 NM_144705 AK296678 CU692394	-206093	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3895340	-	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	44199	-	AB049940 TSC_hg19_v1_chr2_-_95787749 BC014172 NM_031902	44369	-	AK027363 NM_032788	81919	-	BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5##AB049940|MRPS5|64969|mitochondrial ribosomal protein S5##BC014172|MRPS5|64969|mitochondrial ribosomal protein S5##NM_031902|MRPS5|64969|mitochondrial ribosomal protein S5##AK027363|ZNF514|84874|zinc finger protein 514##NM_032788|ZNF514|84874|zinc finger protein 514	0.032519	
chr6	166756612	166756719	reg1031845.p2	4.300	+	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	-631	-	BC018969 NM_145169 TSC_hg19_v1_chr6_-_166756020	-658	-	BC034775 NM_175922 TSC_hg19_v1_chr6_-_166721880	-34789	-	CU674406 TSC_hg19_v1_chr6_-_166796429 BC000810 AK312201 AK310934	39744	-	TSC_hg19_v1_chr6_-_166796469 AF125101 AF151887 NM_016098	39845	-	DQ891864 DQ895053 L07598 TSC_hg19_v1_chr6_-_167040629	283912	-	AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1##BC018969|SFT2D1|113402|SFT2 domain containing 1##NM_145169|SFT2D1|113402|SFT2 domain containing 1##BC034775|PRR18|285800|proline rich 18##NM_175922|PRR18|285800|proline rich 18##BC000810|BRP44L|51660|brain protein 44-like##AK312201|BRP44L|51660|brain protein 44-like##AF125101|BRP44L|51660|brain protein 44-like##AF151887|BRP44L|51660|brain protein 44-like##NM_016098|BRP44L|51660|brain protein 44-like##DQ891864|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##DQ895053|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##L07598|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	0.0	
chr8	128209213	128209376	reg1029131.p1	4.300	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-638570	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-638739	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1245881	-	DQ486513 NM_001159542	218562	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	539031	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	539196	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.0	
chrX	106203260	106203366	reg1032124.p1	4.300	+	TSC_hg19_v1_chrX_+_106171329 AY358474 BC014424 AB463528 DQ892216 DQ895412 AF250558	-31920	+	NM_020384 BC071747 AK075405 AK075371	-39646	+	AK312515 NM_001171095	-41724	+	EF125209 TSC_hg19_v1_chrX_-_106243332	39971	-	TSC_hg19_v1_chrX_-_106243443 EF125210 NM_001085354 NM_024657	40161	-	TSC_hg19_v1_chrX_-_106362035 AK001878 BC006986	158719	-	AY358474|CLDN2|9075|claudin 2##BC014424|CLDN2|9075|claudin 2##DQ892216|CLDN2|9075|claudin 2##DQ895412|CLDN2|9075|claudin 2##AF250558|CLDN2|9075|claudin 2##NM_020384|CLDN2|9075|claudin 2##BC071747|CLDN2|9075|claudin 2##AK075405|CLDN2|9075|claudin 2##AK075371|CLDN2|9075|claudin 2##AK312515|CLDN2|9075|claudin 2##NM_001171095|CLDN2|9075|claudin 2##EF125209|MORC4|79710|MORC family CW-type zinc finger 4##EF125210|MORC4|79710|MORC family CW-type zinc finger 4##NM_001085354|MORC4|79710|MORC family CW-type zinc finger 4##NM_024657|MORC4|79710|MORC family CW-type zinc finger 4##AK001878|RBM41|55285|RNA binding motif protein 41##BC006986|RBM41|55285|RNA binding motif protein 41	0.454551	CTCF.p2:8:0.455
chr1	117664791	117664971	reg1029339.p2	4.299	+	AK023243 AK222901 BC034943 AY669488 NM_001145635 NM_025188	-502	-	TSC_hg19_v1_chr1_+_117602948 AF073771 NM_003594 AF080255 BC015341 BC030058	-61927	+	AK291017 TSC_hg19_v1_chr1_+_117602939	-61957	+	AK303466 NM_001253849	81576	-	AY280972 DQ103757 AB590614 BC074729 AY346100 AY358352 AK026071 AK225413 AK310812 AY442303 BC065717 BX648021 DQ836392 NM_001253850 NM_024626	88647	-	TSC_hg19_v1_chr1_+_117910083 BC052954 AK307842 NM_006699 BC063300	245212	+	AK023243|TRIM45|80263|tripartite motif containing 45##AK222901|TRIM45|80263|tripartite motif containing 45##BC034943|TRIM45|80263|tripartite motif containing 45##AY669488|TRIM45|80263|tripartite motif containing 45##NM_001145635|TRIM45|80263|tripartite motif containing 45##NM_025188|TRIM45|80263|tripartite motif containing 45##AF073771|TTF2|8458|transcription termination factor, RNA polymerase II##NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II##AF080255|TTF2|8458|transcription termination factor, RNA polymerase II##BC015341|TTF2|8458|transcription termination factor, RNA polymerase II##BC030058|TTF2|8458|transcription termination factor, RNA polymerase II##AK291017|TTF2|8458|transcription termination factor, RNA polymerase II##AK303466|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253849|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY280972|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ103757|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC074729|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY346100|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY358352|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK026071|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK225413|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AK310812|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##AY442303|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC065717|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BX648021|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##DQ836392|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_001253850|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##NM_024626|VTCN1|79679|V-set domain containing T cell activation inhibitor 1##BC052954|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##AK307842|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##NM_006699|MAN1A2|10905|mannosidase, alpha, class 1A, member 2##BC063300|MAN1A2|10905|mannosidase, alpha, class 1A, member 2	0.403942	CTCF.p2:-24:0.404
chr11	59030987	59031067	reg1011581.p2	4.299	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	-50620	-	TSC_hg19_v1_chr11_+_58940008 AB023154 AB385405	-90998	+	TSC_hg19_v1_chr11_+_58939648 NM_015177	-91342	+	BC140917 NM_001004729	100880	+	NM_001001954 BC136991	159409	-	BC137060 BC137061 NM_001004728	179601	+	BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1##AB023154|DTX4|23220|deltex homolog 4 (Drosophila)##NM_015177|DTX4|23220|deltex homolog 4 (Drosophila)##BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001001954|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC136991|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC137060|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1##BC137061|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1##NM_001004728|OR5A1|219982|olfactory receptor, family 5, subfamily A, member 1	0.0	
chr11	73000259	73000439	reg1004158.p1	4.299	+	BC009391 NM_004154 BC000571 AF218005 X97058 AK311529 U52464	-17010	+	AF007892 AX775903 NM_176798	-19411	+	NM_176796 NM_176797 AF007891	-24773	+	TSC_hg19_v1_chr11_+_73019337 AK074500	19055	+	BC137228 NM_014786 AF378754	19316	+	TSC_hg19_v1_chr11_-_73020422 AK300095	20074	-	BC009391|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_004154|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##BC000571|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF218005|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##X97058|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##U52464|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007892|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AX775903|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176798|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176796|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176797|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007891|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK300095|LOC100287837|100287837|uncharacterized LOC100287837	0.0	
chr13	91960689	91960789	reg1029796.p2	4.299	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3635870	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5587300	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-7504239	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	90165	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	1918688	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3171087	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.0	
chr14	20685296	20685401	reg1040706.p1	4.299	+	AB463954 NM_001005503	-19854	+	NM_001004724	-73454	+	NM_001004715	-99783	+	AB529290 NM_001004480	6520	+	BC137054 BC137055 AB529289 NM_001004479	25575	+	BX248066 BC008647 EU832467 TSC_hg19_v1_chr14_-_20774111 BC030822 BX640732 BC053538 BX648584	88759	-	NM_001005503|OR11G2|390439|olfactory receptor, family 11, subfamily G, member 2##NM_001004724|OR4N5|390437|olfactory receptor, family 4, subfamily N, member 5##NM_001004715|OR4K17|390436|olfactory receptor, family 4, subfamily K, member 17##NM_001004480|OR11H6|122748|olfactory receptor, family 11, subfamily H, member 6##BC137054|OR11H4|390442|olfactory receptor, family 11, subfamily H, member 4##BC137055|OR11H4|390442|olfactory receptor, family 11, subfamily H, member 4##NM_001004479|OR11H4|390442|olfactory receptor, family 11, subfamily H, member 4##BX248066|TTC5|91875|tetratricopeptide repeat domain 5##BC008647|TTC5|91875|tetratricopeptide repeat domain 5##EU832467|TTC5|91875|tetratricopeptide repeat domain 5##BC030822|TTC5|91875|tetratricopeptide repeat domain 5##BX640732|TTC5|91875|tetratricopeptide repeat domain 5##BC053538|TTC5|91875|tetratricopeptide repeat domain 5##BX648584|TTC5|91875|tetratricopeptide repeat domain 5	0.012511	
chr16	11422463	11422581	reg1027433.p1	4.299	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-47380	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	-52202	-	NM_021247	-55071	-	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	16772	+	TSC_hg19_v1_chr16_+_11439315 BC013040	16796	+	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	257665	-	BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2##NM_021247|PRM3|58531|protamine 3##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor	0.0	
chr19	48444637	48444726	reg1032353.p2	4.299	+	BC020755 TSC_hg19_v1_chr19_-_48389573 L02337 S43859 AK313415 AK289380 NM_003167	-55069	-	CU676700 DQ891165 DQ894346 U08024 L20000 X70222 TSC_hg19_v1_chr19_-_48389554 X84816 U08025	-55143	-	NM_000554 DQ426868 BC016664 DQ426867 BC053672	-119526	+	AB590993 DQ227497 NM_001128326	50701	-	AF279147 NM_022142 BC015598	53244	+	HQ258076 BC126133 BC126135 AF169159 NM_019855	102564	-	BC020755|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L02337|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##S43859|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##AK313415|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##AK289380|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##NM_003167|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ891165|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ894346|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08024|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L20000|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X70222|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X84816|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08025|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##NM_000554|CRX|1406|cone-rod homeobox##DQ426868|CRX|1406|cone-rod homeobox##BC016664|CRX|1406|cone-rod homeobox##DQ426867|CRX|1406|cone-rod homeobox##BC053672|CRX|1406|cone-rod homeobox##DQ227497|BSPH1|100131137|binder of sperm protein homolog 1##NM_001128326|BSPH1|100131137|binder of sperm protein homolog 1##AF279147|ELSPBP1|64100|epididymal sperm binding protein 1##NM_022142|ELSPBP1|64100|epididymal sperm binding protein 1##BC015598|ELSPBP1|64100|epididymal sperm binding protein 1##HQ258076|CABP5|56344|calcium binding protein 5##BC126133|CABP5|56344|calcium binding protein 5##BC126135|CABP5|56344|calcium binding protein 5##AF169159|CABP5|56344|calcium binding protein 5##NM_019855|CABP5|56344|calcium binding protein 5	0.0	
chr2	110271611	110271772	reg1032336.p1	4.299	+	NM_001099289 DQ307286	-525628	+	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	-665944	-	TSC_hg19_v1_chr2_-_109605623 AK296936	-666072	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	99790	-	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	100034	-	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	100254	+	NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##AK296936|EDAR|10913|ectodysplasin A receptor##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57	0.0	
chr2	232265535	232265649	reg1028541.p2	4.299	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	-5170	+	TSC_hg19_v1_chr2_+_232120778 AB055779	-144814	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-202198	+	AK001314 TSC_hg19_v1_chr2_-_232326464	60837	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	63543	-	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	63643	-	AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AY929062|ARMC9|80210|armadillo repeat containing 9##AK001314|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin##BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin	0.662186	CTCF.p2:-16:0.662
chr3	893875	893966	reg1032699.p2	4.299	+	AK126307 TSC_hg19_v1_chr3_+_577916	-316005	+	NM_001253388 BC104918 BC143496 BC143498 AB384920	-532508	+	TSC_hg19_v1_chr3_+_239671 AK055236	-654249	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	240743	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	1246641	+	NM_001206955	1386592	+	NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK055236|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4	0.0	
chr6	6546700	6546881	reg1004332.p1	4.299	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-225880	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-225905	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-539093	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	42160	+	BC039678 TSC_hg19_v1_chr6_+_6725205	178371	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	561036	+	NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1	0.0	
chr9	114720402	114720582	reg1033360.p1	4.299	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-61025	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-61378	+	AL833535 NM_173521	-174717	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	217028	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	374795	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	375357	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chr1	25360498	25360656	reg1034016.p2	4.298	+	BC013362 AK310945 NM_001031680 AF022726	-69035	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-103791	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-103838	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	198410	-	BC065040 TSC_hg19_v1_chr1_-_25573922	213346	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	213396	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr16	13530656	13530837	reg1028638.p1	4.298	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-535278	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-633027	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-633095	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	483285	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	634340	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	749772	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.0	
chr16	87426964	87427072	reg1032138.p1	4.298	+	TSC_hg19_v1_chr16_+_87425998 AF303888 AM393561 DQ893152 DQ896448 AB528176 AL834298	-1004	+	TSC_hg19_v1_chr16_+_87425947 AK025556 BC067797 BC018634	-1055	+	TSC_hg19_v1_chr16_+_87425938 AK290956 BC048009 AK310224 AK310335 AF087871 AF183417	-1109	+	AB011151 AB384500 NM_015144 AB030243 BC101478	98372	-	AB593088 TSC_hg19_v1_chr16_+_87636492 NM_020655 BC036533	209483	+	TSC_hg19_v1_chr16_+_87636574 AB042636	209560	+	AF303888|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AM393561|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ893152|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ896448|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AL834298|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK025556|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC067797|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC018634|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK290956|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC048009|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK310224|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK310335|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AF087871|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AF183417|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AB011151|ZCCHC14|23174|zinc finger, CCHC domain containing 14##NM_015144|ZCCHC14|23174|zinc finger, CCHC domain containing 14##AB030243|ZCCHC14|23174|zinc finger, CCHC domain containing 14##BC101478|ZCCHC14|23174|zinc finger, CCHC domain containing 14##NM_020655|JPH3|57338|junctophilin 3##BC036533|JPH3|57338|junctophilin 3##AB042636|JPH3|57338|junctophilin 3	0.0	
chr20	10655468	10655609	reg1032667.p1	4.298	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-969	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	-1334	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-239562	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1215911	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	1243019	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	2334103	+	BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3	0.0	
chr2	152792051	152792133	reg1039499.p1	4.298	+	TSC_hg19_v1_chr2_-_152684998 NM_001037174 NM_012097 NM_177985	-107096	-	TSC_hg19_v1_chr2_-_152684936 AF087889 AK298937	-107146	-	TSC_hg19_v1_chr2_-_152684901 AK292714 BC001254	-107189	-	AY054985 AK290049 NM_001005747	38374	-	AK294398 AK316045 TSC_hg19_v1_chr2_-_152955250 NM_001005746	163138	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	163455	-	NM_001037174|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_012097|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_177985|ARL5A|26225|ADP-ribosylation factor-like 5A##AF087889|ARL5A|26225|ADP-ribosylation factor-like 5A##AK298937|ARL5A|26225|ADP-ribosylation factor-like 5A##AK292714|ARL5A|26225|ADP-ribosylation factor-like 5A##BC001254|ARL5A|26225|ADP-ribosylation factor-like 5A##AY054985|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK290049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005747|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	0.0	
chr4_ctg9_hap1	482827	482980	reg1033858.p1	4.298	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.126318	
chr10	104613988	104614116	reg1032592.p1	4.297	+	NM_001136200 NM_144591 AL832477 TSC_hg19_v1_chr10_+_104614015 AK098071 BC015994 BC040069 AK311742	-51	+	AK308466 BT020000 CU687686 BC062997 BC063388 BC032843 M14564 TSC_hg19_v1_chr10_-_104597171 AK289898 AK094106 AK312235 NM_000102	-16868	-	TSC_hg19_v1_chr10_+_104590431 CU687687	-23608	+	NM_020682 AK057833 AK225972 AF226730 AK309737 BC119637 BC119638	15205	+	TSC_hg19_v1_chr10_+_104678078 BC021222 AK023479 NM_017649 NM_199076 NM_199077	64005	+	BX648078 TSC_hg19_v1_chr10_-_104953030 BC001595 AK127670 AK291667 AK312517 D38524 NM_001134373 NM_012229	338995	-	NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32##NM_144591|C10orf32|119032|chromosome 10 open reading frame 32##AL832477|C10orf32|119032|chromosome 10 open reading frame 32##AK098071|C10orf32|119032|chromosome 10 open reading frame 32##BC015994|C10orf32|119032|chromosome 10 open reading frame 32##BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT readthrough##AK311742|C10orf32|119032|chromosome 10 open reading frame 32##AK308466|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BT020000|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC062997|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC063388|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##BC032843|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##M14564|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK289898|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK094106|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##AK312235|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##NM_000102|CYP17A1|1586|cytochrome P450, family 17, subfamily A, polypeptide 1##NM_020682|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK057833|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK225972|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AF226730|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK309737|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119637|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119638|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC021222|CNNM2|54805|cyclin M2##AK023479|CNNM2|54805|cyclin M2##NM_017649|CNNM2|54805|cyclin M2##NM_199076|CNNM2|54805|cyclin M2##NM_199077|CNNM2|54805|cyclin M2##BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II##BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II##AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II##AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II##AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II##D38524|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II	0.0	
chr12	6667320	6667430	reg1031973.p1	4.297	+	TSC_hg19_v1_chr12_-_6665250 BC001790 BC010431 BC023664 BC110387 NM_001039670 NM_001193457 NM_080730	-2117	-	M36164 TSC_hg19_v1_chr12_+_6647482	-19958	+	TSC_hg19_v1_chr12_+_6643982 M17851 AY633612 BC023632 DQ891557 DQ894744 AB463693 CU679249 J02642 BT006893 CR407671	-23393	+	TSC_hg19_v1_chr12_-_6677453 BC000656 BC065257 AK129852 BC106072 BC082985 BC128183 BC128184 AK056208 AK307582 NM_001033714 NM_006170	10091	-	CR936680 EU446505 TSC_hg19_v1_chr12_-_6715604	48193	-	X86691 TSC_hg19_v1_chr12_-_6716523 BC014964 BC025962 BC038596	49126	-	BC001790|IFFO1|25900|intermediate filament family orphan 1##BC010431|IFFO1|25900|intermediate filament family orphan 1##BC023664|IFFO1|25900|intermediate filament family orphan 1##BC110387|IFFO1|25900|intermediate filament family orphan 1##NM_001039670|IFFO1|25900|intermediate filament family orphan 1##NM_001193457|IFFO1|25900|intermediate filament family orphan 1##NM_080730|IFFO1|25900|intermediate filament family orphan 1##M36164|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##M17851|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##AY633612|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC023632|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##DQ891557|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##DQ894744|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##J02642|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BT006893|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##CR407671|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##BC000656|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC065257|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK129852|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC106072|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC082985|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC128183|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC128184|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK056208|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK307582|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##NM_001033714|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##NM_006170|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##CR936680|CHD4|1108|chromodomain helicase DNA binding protein 4##EU446505|CHD4|1108|chromodomain helicase DNA binding protein 4##X86691|CHD4|1108|chromodomain helicase DNA binding protein 4##BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4##BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4##BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4	0.94443	CTCF.p2:5:0.944
chr21	44271033	44271141	reg1029413.p2	4.297	+	TSC_hg19_v1_chr21_+_44073730 NM_001001567 NM_001001568 NM_001001569 NM_001001570 NM_001001571 NM_001001572 NM_001001573 NM_001001574 NM_001001575 NM_001001576 NM_001001577 NM_001001578 NM_001001579 NM_001001580 NM_001001581 NM_001001582 NM_001001583 NM_001001584 NM_001001585 NM_002606 AF048837 AY701187 BC009047 AK314679 AY196299 AY196300 AY196301 AY196302 AY196303 AY196304 AY196305 AY196306 AY196307 AY196308 AY196309 AY196310 AY196311 AY196312 AY196313 AY196314 AK001307 AK294112 AF067223 AF067224 AF067225 AF067226 AB527758 AY242121 BT007016 GQ129331 GQ129332	-197300	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	-337084	+	AJ269529 NM_018964	-351346	+	AB590172 CU675357 DQ892967 DQ896215 TSC_hg19_v1_chr21_-_44299643 AK292923 AK315008 AJ243912 AJ243913 BC006341	28537	-	TSC_hg19_v1_chr21_-_44299690 BC001074 NM_018669 NM_033661 AK298015	28597	-	TSC_hg19_v1_chr21_+_44313422 NM_001001503 NM_021075 BC054016 BC021217 AK308228 AK289586 BC033766 CU676876 CU689730 CR542174 CR542190	42314	+	NM_001001567|PDE9A|5152|phosphodiesterase 9A##NM_001001568|PDE9A|5152|phosphodiesterase 9A##NM_001001569|PDE9A|5152|phosphodiesterase 9A##NM_001001570|PDE9A|5152|phosphodiesterase 9A##NM_001001571|PDE9A|5152|phosphodiesterase 9A##NM_001001572|PDE9A|5152|phosphodiesterase 9A##NM_001001573|PDE9A|5152|phosphodiesterase 9A##NM_001001574|PDE9A|5152|phosphodiesterase 9A##NM_001001575|PDE9A|5152|phosphodiesterase 9A##NM_001001576|PDE9A|5152|phosphodiesterase 9A##NM_001001577|PDE9A|5152|phosphodiesterase 9A##NM_001001578|PDE9A|5152|phosphodiesterase 9A##NM_001001579|PDE9A|5152|phosphodiesterase 9A##NM_001001580|PDE9A|5152|phosphodiesterase 9A##NM_001001581|PDE9A|5152|phosphodiesterase 9A##NM_001001582|PDE9A|5152|phosphodiesterase 9A##NM_001001583|PDE9A|5152|phosphodiesterase 9A##NM_001001584|PDE9A|5152|phosphodiesterase 9A##NM_001001585|PDE9A|5152|phosphodiesterase 9A##NM_002606|PDE9A|5152|phosphodiesterase 9A##AF048837|PDE9A|5152|phosphodiesterase 9A##AY701187|PDE9A|5152|phosphodiesterase 9A##BC009047|PDE9A|5152|phosphodiesterase 9A##AK314679|PDE9A|5152|phosphodiesterase 9A##AY196299|PDE9A|5152|phosphodiesterase 9A##AY196300|PDE9A|5152|phosphodiesterase 9A##AY196301|PDE9A|5152|phosphodiesterase 9A##AY196302|PDE9A|5152|phosphodiesterase 9A##AY196303|PDE9A|5152|phosphodiesterase 9A##AY196304|PDE9A|5152|phosphodiesterase 9A##AY196305|PDE9A|5152|phosphodiesterase 9A##AY196306|PDE9A|5152|phosphodiesterase 9A##AY196307|PDE9A|5152|phosphodiesterase 9A##AY196308|PDE9A|5152|phosphodiesterase 9A##AY196309|PDE9A|5152|phosphodiesterase 9A##AY196310|PDE9A|5152|phosphodiesterase 9A##AY196311|PDE9A|5152|phosphodiesterase 9A##AY196312|PDE9A|5152|phosphodiesterase 9A##AY196313|PDE9A|5152|phosphodiesterase 9A##AY196314|PDE9A|5152|phosphodiesterase 9A##AK001307|PDE9A|5152|phosphodiesterase 9A##AK294112|PDE9A|5152|phosphodiesterase 9A##AF067223|PDE9A|5152|phosphodiesterase 9A##AF067224|PDE9A|5152|phosphodiesterase 9A##AF067225|PDE9A|5152|phosphodiesterase 9A##AF067226|PDE9A|5152|phosphodiesterase 9A##AY242121|PDE9A|5152|phosphodiesterase 9A##BT007016|PDE9A|5152|phosphodiesterase 9A##GQ129331|PDE9A|5152|phosphodiesterase 9A##GQ129332|PDE9A|5152|phosphodiesterase 9A##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##DQ892967|WDR4|10785|WD repeat domain 4##DQ896215|WDR4|10785|WD repeat domain 4##AK292923|WDR4|10785|WD repeat domain 4##AK315008|WDR4|10785|WD repeat domain 4##AJ243912|WDR4|10785|WD repeat domain 4##AJ243913|WDR4|10785|WD repeat domain 4##BC006341|WDR4|10785|WD repeat domain 4##BC001074|WDR4|10785|WD repeat domain 4##NM_018669|WDR4|10785|WD repeat domain 4##NM_033661|WDR4|10785|WD repeat domain 4##AK298015|WDR4|10785|WD repeat domain 4##NM_001001503|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##NM_021075|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC054016|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC021217|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK308228|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK289586|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC033766|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542174|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542190|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa	0.989733	CTCF.p2:-8:0.990
chr3	196213290	196213400	reg1028960.p1	4.297	+	TSC_hg19_v1_chr3_-_196159304 NM_015562	-54012	-	TSC_hg19_v1_chr3_-_196159299 AK026451 AK129880 AK303630 AK308699 AK307899	-54046	-	AB018337 TSC_hg19_v1_chr3_-_196159295 BC047420	-54062	-	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	17233	-	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	28868	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	82045	-	NM_015562|UBXN7|26043|UBX domain protein 7##AK026451|UBXN7|26043|UBX domain protein 7##AK129880|UBXN7|26043|UBX domain protein 7##AK303630|UBXN7|26043|UBX domain protein 7##AK308699|UBXN7|26043|UBX domain protein 7##AK307899|UBXN7|26043|UBX domain protein 7##AB018337|UBXN7|26043|UBX domain protein 7##BC047420|UBXN7|26043|UBX domain protein 7##BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53	0.937397	CTCF.p2:-10:0.937
chr5	140705706	140705807	reg1030795.p1	4.297	+	TSC_hg19_v1_chr5_-_140700346 NM_005642	-5404	-	U18062 TSC_hg19_v1_chr5_-_140700329 BC032737 X97999 BC022798 BC013397 AK314837	-5447	-	AF332005 BC069458 BC100935 BC100936 BC100937 AY208943 AF378119 NM_031947	-22235	-	BC112082 BC112084 AF152318 AF152507 NM_018912 NM_031993	4471	+	NM_018915 NM_032009 BC093871 BC104950 AF152322 AF152508	12689	+	AF152323 AF152509 AF152510 BC115408 BC115409 NM_018916 NM_032011 BC133708	17845	+	NM_005642|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa##U18062|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa##BC032737|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa##X97999|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa##BC022798|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa##BC013397|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa##AK314837|TAF7|6879|TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 55kDa##AF332005|SLC25A2|83884|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2##BC069458|SLC25A2|83884|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2##BC100935|SLC25A2|83884|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2##BC100936|SLC25A2|83884|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2##BC100937|SLC25A2|83884|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2##AY208943|SLC25A2|83884|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2##AF378119|SLC25A2|83884|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2##NM_031947|SLC25A2|83884|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2##BC112082|PCDHGA1|56114|protocadherin gamma subfamily A, 1##BC112084|PCDHGA1|56114|protocadherin gamma subfamily A, 1##AF152318|PCDHGA1|56114|protocadherin gamma subfamily A, 1##AF152507|PCDHGA1|56114|protocadherin gamma subfamily A, 1##NM_018912|PCDHGA1|56114|protocadherin gamma subfamily A, 1##NM_031993|PCDHGA1|56114|protocadherin gamma subfamily A, 1##NM_018915|PCDHGA2|56113|protocadherin gamma subfamily A, 2##NM_032009|PCDHGA2|56113|protocadherin gamma subfamily A, 2##BC093871|PCDHGA2|56113|protocadherin gamma subfamily A, 2##BC104950|PCDHGA2|56113|protocadherin gamma subfamily A, 2##AF152322|PCDHGA2|56113|protocadherin gamma subfamily A, 2##AF152508|PCDHGA2|56113|protocadherin gamma subfamily A, 2##AF152323|PCDHGA3|56112|protocadherin gamma subfamily A, 3##AF152509|PCDHGA3|56112|protocadherin gamma subfamily A, 3##AF152510|PCDHGA3|56112|protocadherin gamma subfamily A, 3##BC115408|PCDHGA3|56112|protocadherin gamma subfamily A, 3##BC115409|PCDHGA3|56112|protocadherin gamma subfamily A, 3##NM_018916|PCDHGA3|56112|protocadherin gamma subfamily A, 3##NM_032011|PCDHGA3|56112|protocadherin gamma subfamily A, 3##BC133708|PCDHGA3|56112|protocadherin gamma subfamily A, 3	0.011587	
chr8	142096732	142096913	reg1022828.p2	4.297	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-85566	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-451198	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-575259	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	41915	+	AK128212 NM_001080431	141850	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	167368	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.0	
chr9	98572575	98572692	reg1027749.p1	4.297	+	AB189436 AB189437 NM_001083602 NM_001083603 BC043542	-293341	-	AB212827 AB212828 AB239329 TSC_hg19_v1_chr9_-_98279070	-293629	-	NM_000264 TSC_hg19_v1_chr9_-_98270933	-301749	-	TSC_hg19_v1_chr9_-_98637744 AF170307	65119	-	TSC_hg19_v1_chr9_-_98637839 AK092137 AX747374	65220	-	NM_001010895 TSC_hg19_v1_chr9_+_98637942 AK129624 AK308409 AL389953	65308	+	AB189436|PTCH1|5727|patched 1##AB189437|PTCH1|5727|patched 1##NM_001083602|PTCH1|5727|patched 1##NM_001083603|PTCH1|5727|patched 1##BC043542|PTCH1|5727|patched 1##AB212827|PTCH1|5727|patched 1##AB212828|PTCH1|5727|patched 1##AB239329|PTCH1|5727|patched 1##NM_000264|PTCH1|5727|patched 1##AF170307|LINC00476|100128782|long intergenic non-protein coding RNA 476##AK092137|LINC00476|100128782|long intergenic non-protein coding RNA 476##NM_001010895|C9orf102|375748|chromosome 9 open reading frame 102##AK308409|C9orf102|375748|chromosome 9 open reading frame 102##AL389953|C9orf102|375748|chromosome 9 open reading frame 102	0.033178	
chr10	1018779	1018851	reg1039041.p1	4.296	+	BC131630 BC152443 D86971 NM_015155	-87118	-	TSC_hg19_v1_chr10_-_735609 AB023151 BC063313 NM_014974	-283124	-	AK096000 BC144473 AK296168 TSC_hg19_v1_chr10_+_696010 AK096013	-322864	+	TSC_hg19_v1_chr10_-_1034270 AK126769	15454	-	AK130873 TSC_hg19_v1_chr10_-_1034282	15484	-	TSC_hg19_v1_chr10_+_1034348 AK001552 NM_012341	15526	+	BC131630|LARP4B|23185|La ribonucleoprotein domain family, member 4B##BC152443|LARP4B|23185|La ribonucleoprotein domain family, member 4B##D86971|LARP4B|23185|La ribonucleoprotein domain family, member 4B##NM_015155|LARP4B|23185|La ribonucleoprotein domain family, member 4B##AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##AK096000|C10orf108|414235|chromosome 10 open reading frame 108##AK296168|C10orf108|414235|chromosome 10 open reading frame 108##AK096013|C10orf108|414235|chromosome 10 open reading frame 108##AK130873|LOC100288619|100288619|uncharacterized LOC100288619##AK001552|GTPBP4|23560|GTP binding protein 4##NM_012341|GTPBP4|23560|GTP binding protein 4	0.0	
chr13	111806471	111806586	reg1026614.p3	4.296	+	TSC_hg19_v1_chr13_+_111806070 D63476	-450	+	TSC_hg19_v1_chr13_+_111806041 AB177849 NM_003899	-477	+	AK300157 TSC_hg19_v1_chr13_+_111806035	-492	+	NM_001113513 BC050521	32658	+	AK300272 TSC_hg19_v1_chr13_+_111855425	48894	+	BC029889 NM_152324	166486	+	D63476|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AB177849|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_003899|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK300157|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113513|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC050521|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC029889|C13orf16|121793|chromosome 13 open reading frame 16##NM_152324|C13orf16|121793|chromosome 13 open reading frame 16	0.950033	CTCF.p2:-10:0.950
chr15	74595079	74595225	reg1000815.p1	4.296	+	NM_025055 AK057417	-66448	+	AK299191 NM_001199040	-93107	-	AF352729 AY358748 BC015881 AK056125 NM_001142617 NM_001142619 NM_001142620 TSC_hg19_v1_chr15_-_74501378	-93809	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	15753	+	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	63383	-	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	64851	-	NM_025055|CCDC33|80125|coiled-coil domain containing 33##AK057417|CCDC33|80125|coiled-coil domain containing 33##AK299191|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001199040|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AF352729|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AY358748|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##BC015881|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AK056125|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142617|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142619|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142620|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	0.0	
chr19	6753652	6753803	reg1009216.p2	4.296	+	TSC_hg19_v1_chr19_+_6739712 NM_004240 AK313296 AB007845 AB072596 AK223109 AF502289 AJ000414 AY081141 BC013002 CU680464 DQ892747 DQ895993 AF380114 BT006698 BT020167 BT020171 CR536513	-13993	+	TSC_hg19_v1_chr19_-_6737615 BC146909 AX775899 NM_001080452	-16109	-	TSC_hg19_v1_chr19_-_6737592 AK291968	-16132	-	TSC_hg19_v1_chr19_-_6767447 AK225386 AK292781 AK299406 AK310659 BC006281 AF124249 AY358406 NM_005490 AK290293	13780	-	TSC_hg19_v1_chr19_+_6772718 NM_005428 AK225710 AK313307	18997	+	TSC_hg19_v1_chr19_+_6772811 AB590871	19081	+	NM_004240|TRIP10|9322|thyroid hormone receptor interactor 10##AK313296|TRIP10|9322|thyroid hormone receptor interactor 10##AB007845|TRIP10|9322|thyroid hormone receptor interactor 10##AB072596|TRIP10|9322|thyroid hormone receptor interactor 10##AK223109|TRIP10|9322|thyroid hormone receptor interactor 10##AF502289|TRIP10|9322|thyroid hormone receptor interactor 10##AJ000414|TRIP10|9322|thyroid hormone receptor interactor 10##AY081141|TRIP10|9322|thyroid hormone receptor interactor 10##BC013002|TRIP10|9322|thyroid hormone receptor interactor 10##DQ892747|TRIP10|9322|thyroid hormone receptor interactor 10##DQ895993|TRIP10|9322|thyroid hormone receptor interactor 10##AF380114|TRIP10|9322|thyroid hormone receptor interactor 10##BT006698|TRIP10|9322|thyroid hormone receptor interactor 10##BT020167|TRIP10|9322|thyroid hormone receptor interactor 10##BT020171|TRIP10|9322|thyroid hormone receptor interactor 10##CR536513|TRIP10|9322|thyroid hormone receptor interactor 10##BC146909|GPR108|56927|G protein-coupled receptor 108##AX775899|GPR108|56927|G protein-coupled receptor 108##NM_001080452|GPR108|56927|G protein-coupled receptor 108##AK291968|GPR108|56927|G protein-coupled receptor 108##AK225386|SH2D3A|10045|SH2 domain containing 3A##AK292781|SH2D3A|10045|SH2 domain containing 3A##AK299406|SH2D3A|10045|SH2 domain containing 3A##AK310659|SH2D3A|10045|SH2 domain containing 3A##BC006281|SH2D3A|10045|SH2 domain containing 3A##AF124249|SH2D3A|10045|SH2 domain containing 3A##AY358406|SH2D3A|10045|SH2 domain containing 3A##NM_005490|SH2D3A|10045|SH2 domain containing 3A##AK290293|SH2D3A|10045|SH2 domain containing 3A##NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor	0.0	
chr21	40084129	40084241	reg1031346.p1	4.296	+	AY204740 AY204741 AY204742 AY204743 NM_001243432 TSC_hg19_v1_chr21_-_40033677 AK297807 NM_001136154 NM_004449	-50525	-	TSC_hg19_v1_chr21_-_40032563 AK309469 NM_001243428	-51609	-	M21535 NM_001243429	-127340	-	J04102 TSC_hg19_v1_chr21_+_40177830	93612	+	TSC_hg19_v1_chr21_+_40177852 NM_005239 BC042954 AK315563 BC017040	93692	+	CU678538 AB451468 AF417108 AY463963 CR541821 CR541852 DQ892311 DQ895511 TSC_hg19_v1_chr21_-_40555337	471137	-	AY204740|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204741|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204742|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204743|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243432|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK297807|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136154|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_004449|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK309469|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243428|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##M21535|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243429|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##J04102|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AB451468|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AF417108|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AY463963|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541821|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541852|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ892311|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ895511|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1	0.066072	
chr2	231312779	231312910	reg1025592.p1	4.296	+	AK091898 NM_001206704	-31374	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-31888	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-31925	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	264702	+	TSC_hg19_v1_chr2_+_231577633 BC020570	264800	+	AK292382 NM_001130849 NM_001130850 AK315692	265434	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.0	
chr5	60533736	60533822	reg1032570.p1	4.296	+	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	-75512	-	BC146876 BC146881 BC014242 BC047489 TSC_hg19_v1_chr5_-_60458209	-75601	-	TSC_hg19_v1_chr5_+_60241003 AK026051 NM_174889 AF087990 AK291296 BC001753 BC070357 BC033965 AB183433	-292767	+	TSC_hg19_v1_chr5_+_60628085 NM_020928	94319	+	AK094862 NM_173667	399856	+	TSC_hg19_v1_chr5_+_61601970 NM_001098511 NM_001243952 NM_001243953 NM_004520	1068194	+	BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##BC146876|C5orf43|643155|chromosome 5 open reading frame 43##BC146881|C5orf43|643155|chromosome 5 open reading frame 43##BC014242|C5orf43|643155|chromosome 5 open reading frame 43##BC047489|C5orf43|643155|chromosome 5 open reading frame 43##AK026051|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_174889|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AF087990|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AK291296|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC001753|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC070357|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC033965|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AB183433|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6##AK094862|C5orf64|285668|chromosome 5 open reading frame 64##NM_173667|C5orf64|285668|chromosome 5 open reading frame 64##NM_001098511|KIF2A|3796|kinesin heavy chain member 2A##NM_001243952|KIF2A|3796|kinesin heavy chain member 2A##NM_001243953|KIF2A|3796|kinesin heavy chain member 2A##NM_004520|KIF2A|3796|kinesin heavy chain member 2A	0.0	
chrX	39298614	39298701	reg1025873.p2	4.296	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-635117	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-635197	+	BC008908 NM_021242	-635585	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	658035	-	BC114220 NM_001123383 NM_001123384	737924	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	1141529	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.829858	CTCF.p2:-1:0.830
chr11	54961092	54961188	reg1032992.p1	4.295	+	NM_001004703	-3445859	+	BC140750 NM_001005272	-3548693	-	BC136850 BC136851 NM_001005270	-4957070	-	AF521869 BC001862 NM_024114	68517	+	BC140748 NM_001005274	149511	+	NM_001005275	174219	+	NM_001004703|OR4C46|119749|olfactory receptor, family 4, subfamily C, member 46##BC140750|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##NM_001005272|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##BC136850|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC136851|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##NM_001005270|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##AF521869|TRIM48|79097|tripartite motif containing 48##BC001862|TRIM48|79097|tripartite motif containing 48##NM_024114|TRIM48|79097|tripartite motif containing 48##BC140748|OR4A16|81327|olfactory receptor, family 4, subfamily A, member 16##NM_001005274|OR4A16|81327|olfactory receptor, family 4, subfamily A, member 16##NM_001005275|OR4A15|81328|olfactory receptor, family 4, subfamily A, member 15	0.0	
chr1	168961084	168961264	reg1035609.p1	4.295	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	-262745	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-415382	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	-447957	-	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	114795	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	375918	-	NM_003666 AF288161 U79751 AK223533	376049	+	DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_003666|BLZF1|8548|basic leucine zipper nuclear factor 1##AF288161|BLZF1|8548|basic leucine zipper nuclear factor 1##U79751|BLZF1|8548|basic leucine zipper nuclear factor 1##AK223533|BLZF1|8548|basic leucine zipper nuclear factor 1	0.0	
chr1	220297366	220297512	reg1034808.p1	4.295	+	TSC_hg19_v1_chr1_+_220267495 AY952883 D28500 AK291432 BC040376	-29833	+	TSC_hg19_v1_chr1_+_220267461 AY267462 NM_018060 BC137438	-29987	+	AJ249339 TSC_hg19_v1_chr1_-_220263167 AK315962 NM_006085	-34265	-	AB020646 BC146760 TSC_hg19_v1_chr1_-_220445745 BC050630 AF004828 BC131573	148273	-	TSC_hg19_v1_chr1_-_220445773 AF255648 AK021928 BC098383	148326	-	TSC_hg19_v1_chr1_-_220445786 AK291234	148351	-	AY952883|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##D28500|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##AK291432|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##BC040376|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##AJ249339|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AK315962|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##NM_006085|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AB020646|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC146760|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC050630|AURKAPS1|6791|aurora kinase A pseudogene 1##AF004828|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC131573|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AF255648|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AK021928|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##BC098383|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)##AK291234|RAB3GAP2|25782|RAB3 GTPase activating protein subunit 2 (non-catalytic)	0.834943	CTCF.p2:-1:0.835
chr13	24272279	24272454	reg1030777.p2	4.295	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	-118834	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-127911	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-264526	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	190650	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	191148	-	NM_001135816 BC142999	191226	+	BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.0	
chr1	37008658	37008736	reg1028375.p2	4.295	+	NM_000760 NM_156039 NM_172313	-59783	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-60213	-	TSC_hg19_v1_chr1_-_36929984 AB049946 AB209905 AK021626 BC031336 AF265439 AK315441 AK302633 NM_031280	-78738	-	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	491078	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	931400	+	TSC_hg19_v1_chr1_+_37940140 AK026884	931453	+	NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AB049946|MRPS15|64960|mitochondrial ribosomal protein S15##AB209905|MRPS15|64960|mitochondrial ribosomal protein S15##AK021626|MRPS15|64960|mitochondrial ribosomal protein S15##BC031336|MRPS15|64960|mitochondrial ribosomal protein S15##AF265439|MRPS15|64960|mitochondrial ribosomal protein S15##AK315441|MRPS15|64960|mitochondrial ribosomal protein S15##AK302633|MRPS15|64960|mitochondrial ribosomal protein S15##NM_031280|MRPS15|64960|mitochondrial ribosomal protein S15##AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.334746	CTCF.p2:4:0.335
chr16	29713296	29713413	reg1029869.p1	4.295	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-22872	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-22960	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-38340	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	43947	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	76232	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	88697	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.0	
chr16	90074295	90074392	reg1029143.p2	4.295	+	NM_145039 TSC_hg19_v1_chr16_-_90039285	-35081	-	TSC_hg19_v1_chr16_+_90039043 BC045753	-35296	+	TSC_hg19_v1_chr16_+_90038996 AK126911 AK056488 AK097044 AK091293 AX746898	-35334	+	BC000700 NM_024043 AK090965 AX746707	2230	-	AK022644 TSC_hg19_v1_chr16_-_90085865 NM_001042610	11556	-	TSC_hg19_v1_chr16_-_90086275 AK308737	11926	-	NM_145039|CENPBD1|92806|CENPB DNA-binding domains containing 1##BC045753|AFG3L1P|172|AFG3 ATPase family gene 3-like 1 (S. cerevisiae), pseudogene##AK126911|AFG3L1P|172|AFG3 ATPase family gene 3-like 1 (S. cerevisiae), pseudogene##AK056488|AFG3L1P|172|AFG3 ATPase family gene 3-like 1 (S. cerevisiae), pseudogene##AK097044|AFG3L1P|172|AFG3 ATPase family gene 3-like 1 (S. cerevisiae), pseudogene##AK091293|AFG3L1P|172|AFG3 ATPase family gene 3-like 1 (S. cerevisiae), pseudogene##BC000700|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1##NM_024043|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1##AK090965|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1##AK022644|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1##NM_001042610|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1##AK308737|DBNDD1|79007|dysbindin (dystrobrevin binding protein 1) domain containing 1	0.0	
chr8	59081956	59082137	reg1032337.p1	4.295	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-174889	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1175620	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1175644	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	241839	+	X56088 M93133 BC101777 BC112184 NM_000780	330661	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	383706	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.0	
chr10	15210541	15210657	reg1032913.p2	4.294	+	BC157831 BC171823 TSC_hg19_v1_chr10_-_15197364	-13244	-	TSC_hg19_v1_chr10_+_15139363 AK057006 U77664 BC029494	-71236	+	AK314131 BC029034 NM_153244	-71290	-	BT007024 CU675371 DQ890667 DQ893848 BC006376 AK315085 AK094904 AF043325 TSC_hg19_v1_chr10_-_15210693 NM_004808	62	-	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	202550	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	551194	-	BC157831|LOC100192204|100192204|peptidylprolyl isomerase A (cyclophilin A) pseudogene##AK057006|RPP38|10557|ribonuclease P/MRP 38kDa subunit##U77664|RPP38|10557|ribonuclease P/MRP 38kDa subunit##BC029494|RPP38|10557|ribonuclease P/MRP 38kDa subunit##AK314131|C10orf111|221060|chromosome 10 open reading frame 111##BC029034|C10orf111|221060|chromosome 10 open reading frame 111##NM_153244|C10orf111|221060|chromosome 10 open reading frame 111##BT007024|NMT2|9397|N-myristoyltransferase 2##DQ890667|NMT2|9397|N-myristoyltransferase 2##DQ893848|NMT2|9397|N-myristoyltransferase 2##BC006376|NMT2|9397|N-myristoyltransferase 2##AK315085|NMT2|9397|N-myristoyltransferase 2##AK094904|NMT2|9397|N-myristoyltransferase 2##AF043325|NMT2|9397|N-myristoyltransferase 2##NM_004808|NMT2|9397|N-myristoyltransferase 2##AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8	0.108229	
chr10	64539342	64539523	reg1030671.p2	4.294	+	AJ505150 NM_199452	-259226	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-405389	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-510893	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	25110	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	25225	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	36665	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.0	
chr1	150592418	150592535	reg1034494.p1	4.294	+	TSC_hg19_v1_chr1_-_150587883 AK124918	-4557	-	TSC_hg19_v1_chr1_-_150552129 NM_001197320 NM_021960 NM_182763	-40306	-	TSC_hg19_v1_chr1_-_150552077 AK316267 AK297217 AK304775 AK312508	-40395	-	TSC_hg19_v1_chr1_-_150601610 AK290064 NM_207045 NM_207046 NM_207047	9106	-	TSC_hg19_v1_chr1_-_150601913 CR457130 CR536578 EU832303 EU832387	9453	-	TSC_hg19_v1_chr1_-_150602036 BC069208	9552	-	NM_001197320|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_021960|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_182763|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK316267|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK297217|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK304775|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK312508|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK290064|ENSA|2029|endosulfine alpha##NM_207045|ENSA|2029|endosulfine alpha##NM_207046|ENSA|2029|endosulfine alpha##NM_207047|ENSA|2029|endosulfine alpha##CR457130|ENSA|2029|endosulfine alpha##CR536578|ENSA|2029|endosulfine alpha##EU832303|ENSA|2029|endosulfine alpha##EU832387|ENSA|2029|endosulfine alpha##BC069208|ENSA|2029|endosulfine alpha	0.862058	CTCF.p2:-17:0.862
chr1	28189712	28189868	reg1028170.p1	4.294	+	AF126488 AX775985 TSC_hg19_v1_chr1_+_28157335 AK313814 AB464098 U14575	-32449	+	TSC_hg19_v1_chr1_+_28157334 AF061958 AK292077 AK297771 AK304619 NM_002713 NM_138558 AK307570 BC093017	-32462	+	NM_014110 TSC_hg19_v1_chr1_+_28157314	-32504	+	CR749321 BC132692 BC133049 NM_001039477 NM_001105556 NM_004848 TSC_hg19_v1_chr1_+_28199054 AK303141 HQ258751 BC031655 AK303090	9282	+	CR450348 DQ892352 DQ895821 TSC_hg19_v1_chr1_-_28241083 J05249 BC001630 AK300691 AK312956 AK296898 AK298759 BC012157	51259	-	TSC_hg19_v1_chr1_-_28241258 BC021257 NM_002946	51474	-	AF126488|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AX775985|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK313814|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##U14575|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AF061958|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK292077|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK297771|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK304619|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_002713|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_138558|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK307570|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##BC093017|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_014110|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##CR749321|C1orf38|9473|chromosome 1 open reading frame 38##BC132692|C1orf38|9473|chromosome 1 open reading frame 38##BC133049|C1orf38|9473|chromosome 1 open reading frame 38##NM_001039477|C1orf38|9473|chromosome 1 open reading frame 38##NM_001105556|C1orf38|9473|chromosome 1 open reading frame 38##NM_004848|C1orf38|9473|chromosome 1 open reading frame 38##AK303141|C1orf38|9473|chromosome 1 open reading frame 38##HQ258751|C1orf38|9473|chromosome 1 open reading frame 38##BC031655|C1orf38|9473|chromosome 1 open reading frame 38##AK303090|C1orf38|9473|chromosome 1 open reading frame 38##CR450348|RPA2|6118|replication protein A2, 32kDa##DQ892352|RPA2|6118|replication protein A2, 32kDa##DQ895821|RPA2|6118|replication protein A2, 32kDa##J05249|RPA2|6118|replication protein A2, 32kDa##BC001630|RPA2|6118|replication protein A2, 32kDa##AK300691|RPA2|6118|replication protein A2, 32kDa##AK312956|RPA2|6118|replication protein A2, 32kDa##AK298759|RPA2|6118|replication protein A2, 32kDa##BC012157|RPA2|6118|replication protein A2, 32kDa##BC021257|RPA2|6118|replication protein A2, 32kDa##NM_002946|RPA2|6118|replication protein A2, 32kDa	0.0	
chr16	30075425	30075530	reg1031340.p2	4.294	+	TSC_hg19_v1_chr16_+_30075504 M11560	-3	+	TSC_hg19_v1_chr16_+_30064512 AK098778 BC004333 AK308495	-10977	+	NM_000034 AK308748 TSC_hg19_v1_chr16_+_30064461	-11041	+	BC016800 TSC_hg19_v1_chr16_+_30075534 NM_184043 BC013614	109	+	TSC_hg19_v1_chr16_+_30075771 NM_001127617	289	+	NM_001243177 NM_184041 TSC_hg19_v1_chr16_+_30077081 D28356	1561	+	M11560|ALDOA|226|aldolase A, fructose-bisphosphate##AK098778|ALDOA|226|aldolase A, fructose-bisphosphate##BC004333|ALDOA|226|aldolase A, fructose-bisphosphate##AK308495|ALDOA|226|aldolase A, fructose-bisphosphate##NM_000034|ALDOA|226|aldolase A, fructose-bisphosphate##AK308748|ALDOA|226|aldolase A, fructose-bisphosphate##BC016800|ALDOA|226|aldolase A, fructose-bisphosphate##NM_184043|ALDOA|226|aldolase A, fructose-bisphosphate##BC013614|ALDOA|226|aldolase A, fructose-bisphosphate##NM_001127617|ALDOA|226|aldolase A, fructose-bisphosphate##NM_001243177|ALDOA|226|aldolase A, fructose-bisphosphate##NM_184041|ALDOA|226|aldolase A, fructose-bisphosphate##D28356|ALDOA|226|aldolase A, fructose-bisphosphate	0.0	
chr17	56429704	56429825	reg1027781.p2	4.294	+	AB527904 CR407663 EU446710 TSC_hg19_v1_chr17_-_56429531 AK311986 U38817 BC002802 U38818 NM_003168 U43923 AK129758	-228	-	TSC_hg19_v1_chr17_+_56414668 AK000271 BC050403 BC032475	-15075	+	AK311306 TSC_hg19_v1_chr17_+_56414566 BC064565	-15195	+	AB527734 TSC_hg19_v1_chr17_-_56492959 AK296769 AK000322 BC109028	63272	-	TSC_hg19_v1_chr17_-_56494896 CR749257	65129	-	NM_017763 TSC_hg19_v1_chr17_-_56494959 CR627423	65180	-	CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK000271|LOC100506779|100506779|uncharacterized LOC100506779##BC050403|LOC100506779|100506779|uncharacterized LOC100506779##BC032475|LOC100506779|100506779|uncharacterized LOC100506779##AK311306|LOC100506779|100506779|uncharacterized LOC100506779##BC064565|LOC100506779|100506779|uncharacterized LOC100506779##AK296769|RNF43|54894|ring finger protein 43##AK000322|RNF43|54894|ring finger protein 43##BC109028|RNF43|54894|ring finger protein 43##CR749257|RNF43|54894|ring finger protein 43##NM_017763|RNF43|54894|ring finger protein 43##CR627423|RNF43|54894|ring finger protein 43	0.0	
chr5	10111810	10111896	reg1030732.p2	4.294	+	BC095521 NM_019599	-481391	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	-565659	-	TSC_hg19_v1_chr5_+_7869306 BC062577	-2242543	+	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	138131	-	AK300042 TSC_hg19_v1_chr5_-_10250001 AK316317 AK055604 AK302012 NM_199133	138152	-	NM_012073 AK302368 TSC_hg19_v1_chr5_+_10250368	138472	+	BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC063406|FAM173B|134145|family with sequence similarity 173, member B##AK300042|FAM173B|134145|family with sequence similarity 173, member B##AK316317|FAM173B|134145|family with sequence similarity 173, member B##AK055604|FAM173B|134145|family with sequence similarity 173, member B##AK302012|FAM173B|134145|family with sequence similarity 173, member B##NM_199133|FAM173B|134145|family with sequence similarity 173, member B##NM_012073|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK302368|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)	0.0	
chr6	157007791	157007912	reg1033259.p1	4.294	+	AF190122 NM_015718	-1230815	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1372228	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1372266	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	91212	+	TSC_hg19_v1_chr6_+_157099206 AB587572	91374	+	TSC_hg19_v1_chr6_+_157099283 AF521671	91433	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.245414	CTCF.p2:-16:0.245
chr12	20702184	20702274	reg1034692.p2	4.293	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	-180031	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-1109041	+	TSC_hg19_v1_chr12_+_19592783 AB209384	-1109434	+	AK308317 NM_001244683	22568	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	146266	+	BC058006 BC105597 NM_019844 BC022843 AK055874 BC070264	261419	+	BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC058006|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC105597|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_019844|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC022843|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##AK055874|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC070264|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3	0.341377	CTCF.p2:18:0.341
chr12	77184760	77184883	reg1014936.p1	4.293	+	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	-26795	+	TSC_hg19_v1_chr12_+_77157894 BC050324 AB023163	-26917	+	TSC_hg19_v1_chr12_+_77157882 NM_015336 BC030990	-26959	+	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	87962	-	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	274468	-	NM_014903 AJ488201	1040311	+	AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC050324|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB023163|ZDHHC17|23390|zinc finger, DHHC-type containing 17##NM_015336|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC030990|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3	0.0	
chr12	90250317	90250497	reg1032954.p2	4.293	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-146862	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-147720	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-200556	-	BC026075 BC024183 BC027600 BC034491 NM_152638	1098544	-	U59111 TSC_hg19_v1_chr12_-_91398750	1148340	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	1148372	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.0	
chr13	114830754	114830870	reg1025006.p1	4.293	+	TSC_hg19_v1_chr13_-_114567041 NM_000820	-263769	-	TSC_hg19_v1_chr13_-_114567037 BC030708	-263776	-	TSC_hg19_v1_chr13_-_114567011 BC038984 L13720	-263791	-	AB385165 TSC_hg19_v1_chr13_-_114898005 AK289746 X89399	67174	-	TSC_hg19_v1_chr13_-_114898028 AK295861 AK313795	67213	-	TSC_hg19_v1_chr13_-_114898058 AK128094	67254	-	NM_000820|GAS6|2621|growth arrest-specific 6##BC030708|GAS6|2621|growth arrest-specific 6##BC038984|GAS6|2621|growth arrest-specific 6##L13720|GAS6|2621|growth arrest-specific 6##AK289746|RASA3|22821|RAS p21 protein activator 3##X89399|RASA3|22821|RAS p21 protein activator 3##AK295861|RASA3|22821|RAS p21 protein activator 3##AK313795|RASA3|22821|RAS p21 protein activator 3##AK128094|RASA3|22821|RAS p21 protein activator 3	0.0	
chr17	46337187	46337291	reg1033156.p1	4.293	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-152087	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-152254	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-158418	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	170299	-	TSC_hg19_v1_chr17_-_46507604 BC039040	170378	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	271032	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.652154	CTCF.p2:10:0.613
chr8	142106598	142106704	reg1016923.p1	4.293	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-95395	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-461027	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-585088	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	32086	+	AK128212 NM_001080431	132021	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	157539	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.0	
chr8	29267248	29267362	reg1020075.p4	4.293	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-59235	-	AL137704 NM_057158	-60984	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-146691	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	673169	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	673267	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	685638	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chr9	68138715	68138845	reg1035464.p1	4.293	+	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	-211964	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-1585505	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-1644584	-	TSC_hg19_v1_chr9_+_68726468 AK311167	587722	+	TSC_hg19_v1_chr9_+_69065493 AK311167	926758	+	NM_001085476	1063423	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6	0.990956	CTCF.p2:1:0.980
chrX	139052954	139053088	reg1032394.p1	4.293	+	BC137148 BC137149 NM_001013403	-5345	-	BC132728 BC132730 AJ580093 AJ580094 NM_001010986 NM_173694	-138606	-	AK302957 AK316416 NM_001099855 NM_001171876	-262667	-	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	534231	-	TSC_hg19_v1_chrX_+_139791923 AK054978	738906	+	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	813631	-	BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##BC132728|ATP11C|286410|ATPase, class VI, type 11C##BC132730|ATP11C|286410|ATPase, class VI, type 11C##AJ580093|ATP11C|286410|ATPase, class VI, type 11C##AJ580094|ATP11C|286410|ATPase, class VI, type 11C##NM_001010986|ATP11C|286410|ATPase, class VI, type 11C##NM_173694|ATP11C|286410|ATPase, class VI, type 11C##AK302957|MCF2|4168|MCF.2 cell line derived transforming sequence##AK316416|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001099855|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171876|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	0.192912	
chr11	24408268	24408361	reg1030313.p2	4.292	+	NM_001195637	-1526343	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-1556969	-	TSC_hg19_v1_chr11_+_22696382 CU680566 AB590780 CR450285	-1711916	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	110335	+	NM_031418 AK302659	1945416	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	2185426	-	NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##CR450285|GAS2|2620|growth arrest-specific 2##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated	0.970533	CTCF.p2:-19:0.971
chr11	63334565	63334745	reg1029512.p1	4.292	+	AK000563 NM_017878	-3801	-	NM_004585 AF092922 AK293357 AK312110 BC009678 AF060228 AB030815 AK123723	-30361	+	AF244975 AF244977 NM_001142537 NM_001142538	-59197	+	AB439591 AB528317 DQ892568 DQ895783 AB030814 AF317086 AX775893 BC103807 BC103808 TSC_hg19_v1_chr11_-_63381778	46976	-	BC001387 TSC_hg19_v1_chr11_-_63381880 X92814	47213	-	AK313075 NM_007069 TSC_hg19_v1_chr11_-_63381909	47254	-	AK000563|HRASLS2|54979|HRAS-like suppressor 2##NM_017878|HRASLS2|54979|HRAS-like suppressor 2##NM_004585|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF092922|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AK293357|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AK312110|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##BC009678|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF060228|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AB030815|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF244975|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AF244977|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142537|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142538|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AB439591|PLA2G16|11145|phospholipase A2, group XVI##DQ892568|PLA2G16|11145|phospholipase A2, group XVI##DQ895783|PLA2G16|11145|phospholipase A2, group XVI##AB030814|PLA2G16|11145|phospholipase A2, group XVI##AF317086|PLA2G16|11145|phospholipase A2, group XVI##BC103807|PLA2G16|11145|phospholipase A2, group XVI##BC103808|PLA2G16|11145|phospholipase A2, group XVI##BC001387|PLA2G16|11145|phospholipase A2, group XVI##X92814|PLA2G16|11145|phospholipase A2, group XVI##AK313075|PLA2G16|11145|phospholipase A2, group XVI##NM_007069|PLA2G16|11145|phospholipase A2, group XVI	0.0	
chr16	75525876	75525987	reg1029134.p1	4.292	+	TSC_hg19_v1_chr16_-_75498598 BC018082 NM_145254 AK298475 BX647432 BX648429 BX648484 AK311919	-27330	-	AM392693 AM393662 AY302139 CU676164 TSC_hg19_v1_chr16_-_75498577	-27393	-	TSC_hg19_v1_chr16_-_75498315 AK094930	-27634	-	AF280086 NM_021615	2994	-	TSC_hg19_v1_chr16_-_75529279 AF219990	3348	-	TSC_hg19_v1_chr16_-_75529303 AK311527 AK093904	3366	-	BC018082|TMEM170A|124491|transmembrane protein 170A##NM_145254|TMEM170A|124491|transmembrane protein 170A##AK298475|TMEM170A|124491|transmembrane protein 170A##BX647432|TMEM170A|124491|transmembrane protein 170A##BX648429|TMEM170A|124491|transmembrane protein 170A##BX648484|TMEM170A|124491|transmembrane protein 170A##AK311919|TMEM170A|124491|transmembrane protein 170A##AY302139|TMEM170A|124491|transmembrane protein 170A##AK094930|TMEM170A|124491|transmembrane protein 170A##AF280086|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6##NM_021615|CHST6|4166|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6	0.0	
chr4	41959847	41959950	reg1028573.p2	4.292	+	TSC_hg19_v1_chr4_+_41937386 BC000948 CU674470 CR457260	-22464	+	TSC_hg19_v1_chr4_+_41937165 NM_018126 AK023062 AK001387 AK094190 AK308501 AY659966	-22688	+	BC025350 TSC_hg19_v1_chr4_-_41884589	-75319	-	NM_001029955 BC052943 BC104224 BC104225 AK122914 BC035027	23877	+	TSC_hg19_v1_chr4_+_41992531 AK312838 NM_006345 BC016949	32619	+	TSC_hg19_v1_chr4_+_41992546 AK299917	32647	+	BC000948|TMEM33|55161|transmembrane protein 33##CR457260|TMEM33|55161|transmembrane protein 33##NM_018126|TMEM33|55161|transmembrane protein 33##AK023062|TMEM33|55161|transmembrane protein 33##AK001387|TMEM33|55161|transmembrane protein 33##AK094190|TMEM33|55161|transmembrane protein 33##AK308501|TMEM33|55161|transmembrane protein 33##AY659966|TMEM33|55161|transmembrane protein 33##NM_001029955|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##BC052943|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##BC104224|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##BC104225|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##AK122914|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##BC035027|DCAF4L1|285429|DDB1 and CUL4 associated factor 4-like 1##AK312838|SLC30A9|10463|solute carrier family 30 (zinc transporter), member 9##NM_006345|SLC30A9|10463|solute carrier family 30 (zinc transporter), member 9##BC016949|SLC30A9|10463|solute carrier family 30 (zinc transporter), member 9##AK299917|SLC30A9|10463|solute carrier family 30 (zinc transporter), member 9	0.967546	CTCF.p2:-35:0.968
chr7	96656946	96657050	reg1000769.p1	4.292	+	BC006226 TSC_hg19_v1_chr7_-_96654144 AK023493 NM_005221 AK297614	-2804	-	NM_005222	-21709	+	TSC_hg19_v1_chr7_-_96633611 AK091367 AX746939 BC101445 BC101446 BC101447 BC101985 BC113049	-23387	-	BC028409 NM_020186	88906	+	TSC_hg19_v1_chr7_+_96747012 BC022858 AF201933 BC020621	90032	+	NM_003182 NM_013996 NM_013997 NM_013998 U37529 AK222957 BC018047 X54469	704354	+	BC006226|DLX5|1749|distal-less homeobox 5##AK023493|DLX5|1749|distal-less homeobox 5##NM_005221|DLX5|1749|distal-less homeobox 5##AK297614|DLX5|1749|distal-less homeobox 5##NM_005222|DLX6|1750|distal-less homeobox 6##AK091367|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101445|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101446|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101447|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC101985|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC113049|DLX6-AS1|285987|DLX6 antisense RNA 1 (non-protein coding)##BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC022858|ACN9|57001|ACN9 homolog (S. cerevisiae)##AF201933|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC020621|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_003182|TAC1|6863|tachykinin, precursor 1##NM_013996|TAC1|6863|tachykinin, precursor 1##NM_013997|TAC1|6863|tachykinin, precursor 1##NM_013998|TAC1|6863|tachykinin, precursor 1##U37529|TAC1|6863|tachykinin, precursor 1##AK222957|TAC1|6863|tachykinin, precursor 1##BC018047|TAC1|6863|tachykinin, precursor 1##X54469|TAC1|6863|tachykinin, precursor 1	0.0	
chr9	104211747	104211842	reg1027438.p2	4.292	+	X01098 TSC_hg19_v1_chr9_-_104198057 AK026411 AK290795 BC029399 NM_000035 X02747	-13720	-	TSC_hg19_v1_chr9_+_104161232 AK290163 AK313655 AK308935 NM_003452 NM_197977 BC065718 BC092425 AF025770 U75454 U95992 BC126120 BC143876 BC143877	-50550	+	TSC_hg19_v1_chr9_-_104160901 BC032008 AK295521 AK000500 AK025643 NM_019051	-50897	-	TSC_hg19_v1_chr9_-_104249468 AK313981 BC006115 NM_032342	37653	-	TSC_hg19_v1_chr9_+_104296134 AF265230 NM_019592 AK022532 BC110584 BC110585 BC152309	84336	+	TSC_hg19_v1_chr9_+_104296143 BC016691 BC063115	84353	+	X01098|ALDOB|229|aldolase B, fructose-bisphosphate##AK026411|ALDOB|229|aldolase B, fructose-bisphosphate##AK290795|ALDOB|229|aldolase B, fructose-bisphosphate##BC029399|ALDOB|229|aldolase B, fructose-bisphosphate##NM_000035|ALDOB|229|aldolase B, fructose-bisphosphate##X02747|ALDOB|229|aldolase B, fructose-bisphosphate##AK290163|ZNF189|7743|zinc finger protein 189##AK313655|ZNF189|7743|zinc finger protein 189##AK308935|ZNF189|7743|zinc finger protein 189##NM_003452|ZNF189|7743|zinc finger protein 189##NM_197977|ZNF189|7743|zinc finger protein 189##BC065718|ZNF189|7743|zinc finger protein 189##BC092425|ZNF189|7743|zinc finger protein 189##AF025770|ZNF189|7743|zinc finger protein 189##U75454|ZNF189|7743|zinc finger protein 189##U95992|ZNF189|7743|zinc finger protein 189##BC126120|ZNF189|7743|zinc finger protein 189##BC143876|ZNF189|7743|zinc finger protein 189##BC143877|ZNF189|7743|zinc finger protein 189##BC032008|MRPL50|54534|mitochondrial ribosomal protein L50##AK000500|MRPL50|54534|mitochondrial ribosomal protein L50##NM_019051|MRPL50|54534|mitochondrial ribosomal protein L50##AK313981|C9orf125|84302|chromosome 9 open reading frame 125##BC006115|C9orf125|84302|chromosome 9 open reading frame 125##NM_032342|C9orf125|84302|chromosome 9 open reading frame 125##AF265230|RNF20|56254|ring finger protein 20##NM_019592|RNF20|56254|ring finger protein 20##AK022532|RNF20|56254|ring finger protein 20##BC110584|RNF20|56254|ring finger protein 20##BC110585|RNF20|56254|ring finger protein 20##BC152309|RNF20|56254|ring finger protein 20##BC016691|RNF20|56254|ring finger protein 20##BC063115|RNF20|56254|ring finger protein 20	0.025004	
chrX	144295185	144295280	reg1031861.p1	4.292	+	GU727624 NM_001012989	-1328060	+	NM_001009615	-1490717	-	TSC_hg19_v1_chrX_-_142723922 NM_001184749	-1571309	-	DQ336118 DQ336119 DQ336120 DQ336121 NM_001009614	33874	+	TSC_hg19_v1_chrX_+_144899439 NM_001144003 NM_001144004 NM_001144005 NM_032539 AK096278 CR627412 AK289732	604181	+	NM_001144006 NM_001144008 NM_001144009 NM_001144010 BC113011 BC113012 TSC_hg19_v1_chrX_+_144903056	607732	+	GU727624|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like##NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like##NM_001009615|SPANXN2|494119|SPANX family, member N2##NM_001184749|SLITRK4|139065|SLIT and NTRK-like family, member 4##DQ336118|SPANXN1|494118|SPANX family, member N1##DQ336119|SPANXN1|494118|SPANX family, member N1##DQ336120|SPANXN1|494118|SPANX family, member N1##DQ336121|SPANXN1|494118|SPANX family, member N1##NM_001009614|SPANXN1|494118|SPANX family, member N1##NM_001144003|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144004|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144005|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_032539|SLITRK2|84631|SLIT and NTRK-like family, member 2##AK096278|SLITRK2|84631|SLIT and NTRK-like family, member 2##CR627412|SLITRK2|84631|SLIT and NTRK-like family, member 2##AK289732|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144006|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144008|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144009|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144010|SLITRK2|84631|SLIT and NTRK-like family, member 2##BC113011|SLITRK2|84631|SLIT and NTRK-like family, member 2##BC113012|SLITRK2|84631|SLIT and NTRK-like family, member 2	0.992845	CTCF.p2:-15:0.993
chr11	66849492	66849672	reg1007075.p2	4.291	+	TSC_hg19_v1_chr11_+_66824317 BC001338 AF498973 CU674656 DQ891124 DQ894303	-25242	+	TSC_hg19_v1_chr11_+_66824285 NM_014578	-25296	+	NM_177963 AK289672 AK289727 BC037406	-58730	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	37157	+	AK096194 TSC_hg19_v1_chr11_+_67007484	157902	+	TSC_hg19_v1_chr11_+_67007558 AB490246 AK299725	158001	+	BC001338|RHOD|29984|ras homolog gene family, member D##AF498973|RHOD|29984|ras homolog gene family, member D##DQ891124|RHOD|29984|ras homolog gene family, member D##DQ894303|RHOD|29984|ras homolog gene family, member D##NM_014578|RHOD|29984|ras homolog gene family, member D##NM_177963|SYT12|91683|synaptotagmin XII##AK289672|SYT12|91683|synaptotagmin XII##AK289727|SYT12|91683|synaptotagmin XII##BC037406|SYT12|91683|synaptotagmin XII##BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A##AK096194|LOC100131150|100131150|uncharacterized LOC100131150##AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A##AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A	0.784983	CTCF.p2:37:0.785
chr12	115792061	115792220	reg1031890.p1	4.291	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-670000	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-945922	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-948216	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	922810	-	TSC_hg19_v1_chr12_-_116715263 AY338463	923020	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	1179089	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.0	
chr1	54842178	54842303	reg1028008.p1	4.291	+	TSC_hg19_v1_chr1_+_54665866 AF151069 AF325707 AY421759 BC000041 CU674006	-176350	+	TSC_hg19_v1_chr1_+_54665855 AK026171	-176387	+	AK024572 NM_016491 TSC_hg19_v1_chr1_+_54665839	-176398	+	CU688156 AK289474 BC003605 BC127866 BC066365 TSC_hg19_v1_chr1_-_54871828 AF500116	29548	-	NM_018070 NM_145716 TSC_hg19_v1_chr1_-_54872066	29782	-	TSC_hg19_v1_chr1_-_54872087 NM_001009955	29844	-	AF151069|MRPL37|51253|mitochondrial ribosomal protein L37##AF325707|MRPL37|51253|mitochondrial ribosomal protein L37##AY421759|MRPL37|51253|mitochondrial ribosomal protein L37##BC000041|MRPL37|51253|mitochondrial ribosomal protein L37##AK026171|MRPL37|51253|mitochondrial ribosomal protein L37##AK024572|MRPL37|51253|mitochondrial ribosomal protein L37##NM_016491|MRPL37|51253|mitochondrial ribosomal protein L37##AK289474|SSBP3|23648|single stranded DNA binding protein 3##BC003605|SSBP3|23648|single stranded DNA binding protein 3##BC066365|SSBP3|23648|single stranded DNA binding protein 3##AF500116|SSBP3|23648|single stranded DNA binding protein 3##NM_018070|SSBP3|23648|single stranded DNA binding protein 3##NM_145716|SSBP3|23648|single stranded DNA binding protein 3##NM_001009955|SSBP3|23648|single stranded DNA binding protein 3	0.0	
chr15	67358966	67359146	reg1030005.p5	4.291	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	-655	+	TSC_hg19_v1_chr15_+_67358179 AK290881	-881	+	NM_001142861 U59914	-358127	+	NM_001145102 AK316017	59067	+	AK298139 NM_001145103	71302	+	NM_001145104 AK300614 AK301348	99440	+	NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##AK290881|SMAD3|4088|SMAD family member 3##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3##AK298139|SMAD3|4088|SMAD family member 3##NM_001145103|SMAD3|4088|SMAD family member 3##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3	0.0	
chr15	70778847	70778992	reg1028546.p1	4.291	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-388676	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-388692	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-437010	-	TSC_hg19_v1_chr15_-_70878946 BC040579	100025	-	BC016881 AL834243 NM_001008224 AK055435	215708	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	276923	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.0	
chr18	27956659	27956773	reg1029076.p1	4.291	+	TSC_hg19_v1_chr18_-_25757363 NM_001792	-2199319	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	-2199679	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	-3191483	-	TSC_hg19_v1_chr18_-_28622624 X83929 D17427 AK291748 NM_001941 NM_024423	665986	-	CR749226 TSC_hg19_v1_chr18_-_28681542	724772	-	TSC_hg19_v1_chr18_-_28682275 EF017811 EF017812 X56807 AK297029 AK290313 BX648425 BC063291 NM_004949 NM_024422	725475	-	NM_001792|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##X83929|DSC3|1825|desmocollin 3##D17427|DSC3|1825|desmocollin 3##AK291748|DSC3|1825|desmocollin 3##NM_001941|DSC3|1825|desmocollin 3##NM_024423|DSC3|1825|desmocollin 3##CR749226|DSC2|1824|desmocollin 2##EF017811|DSC2|1824|desmocollin 2##EF017812|DSC2|1824|desmocollin 2##X56807|DSC2|1824|desmocollin 2##AK297029|DSC2|1824|desmocollin 2##AK290313|DSC2|1824|desmocollin 2##BX648425|DSC2|1824|desmocollin 2##BC063291|DSC2|1824|desmocollin 2##NM_004949|DSC2|1824|desmocollin 2##NM_024422|DSC2|1824|desmocollin 2	0.0	
chr2	139587035	139587137	reg1026969.p1	4.291	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-49280	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-327596	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-327693	+	TSC_hg19_v1_chr2_-_142888540 AK054663	3301470	-	AF176832 NM_018557	3302183	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	4048120	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.731138	CTCF.p2:1:0.731
chr3	101546866	101546944	reg1030861.p2	4.291	+	AK289689 NM_001134456	-48620	+	TSC_hg19_v1_chr3_+_101498080 BC009431	-48817	+	NM_145037 TSC_hg19_v1_chr3_+_101498054	-48857	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	55	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	21469	+	AY090780 NM_175056 BC143817	606962	+	AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##BC009431|FAM55C|91775|family with sequence similarity 55, member C##NM_145037|FAM55C|91775|family with sequence similarity 55, member C##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1	0.0	
chr6	28220011	28220147	reg1026764.p1	4.291	+	BC014031 NM_019110 AK056698 AK315783 AY781778	-57	-	NM_001199479 NM_001199480 NM_006299 AK304013 BC010374 TSC_hg19_v1_chr6_+_28193073 AK226035 AY261373 U62392	-27007	+	AK292767 BC050562 BC015543 BC039027 TSC_hg19_v1_chr6_-_28186889	-33303	-	TSC_hg19_v1_chr6_+_28227095 NM_001007531 BC101681 BC101685 BC038240	7038	+	NM_001023560 NM_001111039 NM_152736 AK095948 TSC_hg19_v1_chr6_+_28234920 BX537535 AK315645 AK297613 AL832741 BC013951 BC013962 AK295393 AK293524	14802	+	NM_001184743 NM_032507 TSC_hg19_v1_chr6_+_28249348 AK223446 AK291228 BC032507 BC040117 BC128585 BC069033	29321	+	BC014031|ZKSCAN4|387032|zinc finger with KRAB and SCAN domains 4##NM_019110|ZKSCAN4|387032|zinc finger with KRAB and SCAN domains 4##AK056698|ZKSCAN4|387032|zinc finger with KRAB and SCAN domains 4##AK315783|ZKSCAN4|387032|zinc finger with KRAB and SCAN domains 4##AY781778|ZKSCAN4|387032|zinc finger with KRAB and SCAN domains 4##NM_001199479|ZNF193|7746|zinc finger protein 193##NM_001199480|ZNF193|7746|zinc finger protein 193##NM_006299|ZNF193|7746|zinc finger protein 193##AK304013|ZNF193|7746|zinc finger protein 193##BC010374|ZNF193|7746|zinc finger protein 193##AK226035|ZNF193|7746|zinc finger protein 193##AY261373|ZNF193|7746|zinc finger protein 193##U62392|ZNF193|7746|zinc finger protein 193##AK292767|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC050562|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC015543|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC039027|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##NM_001007531|NKAPL|222698|NFKB activating protein-like##BC101681|NKAPL|222698|NFKB activating protein-like##BC101685|NKAPL|222698|NFKB activating protein-like##BC038240|NKAPL|222698|NFKB activating protein-like##NM_001023560|ZNF187|7741|zinc finger protein 187##NM_001111039|ZNF187|7741|zinc finger protein 187##NM_152736|ZNF187|7741|zinc finger protein 187##AK095948|ZNF187|7741|zinc finger protein 187##BX537535|ZNF187|7741|zinc finger protein 187##AK315645|ZNF187|7741|zinc finger protein 187##AK297613|ZNF187|7741|zinc finger protein 187##AL832741|ZNF187|7741|zinc finger protein 187##BC013951|ZNF187|7741|zinc finger protein 187##BC013962|ZNF187|7741|zinc finger protein 187##AK295393|ZNF187|7741|zinc finger protein 187##AK293524|ZNF187|7741|zinc finger protein 187##NM_001184743|PGBD1|84547|piggyBac transposable element derived 1##NM_032507|PGBD1|84547|piggyBac transposable element derived 1##AK223446|PGBD1|84547|piggyBac transposable element derived 1##AK291228|PGBD1|84547|piggyBac transposable element derived 1##BC032507|PGBD1|84547|piggyBac transposable element derived 1##BC040117|PGBD1|84547|piggyBac transposable element derived 1##BC128585|PGBD1|84547|piggyBac transposable element derived 1##BC069033|PGBD1|84547|piggyBac transposable element derived 1	0.0	
chr9	90175332	90175472	reg1028322.p1	4.291	+	TSC_hg19_v1_chr9_+_90112781 NM_004938 X76104 BC003614 AK295119	-62534	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	-62816	+	AK127445 NM_001001709 BC132741 BC136791 HQ258059	-411801	+	NM_001912 NM_145918 TSC_hg19_v1_chr9_+_90341001	165591	+	AK075100 TSC_hg19_v1_chr9_+_90341022 BX648848	165620	+	AL832167 BX647102 BX647434 TSC_hg19_v1_chr9_+_90341033 BX537395 BX647101 BX647413 BX647435 BX648849 BX649140 X12451 AF304301 BC142983 AF217997	165638	+	NM_004938|DAPK1|1612|death-associated protein kinase 1##X76104|DAPK1|1612|death-associated protein kinase 1##AK295119|DAPK1|1612|death-associated protein kinase 1##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##NM_001912|CTSL1|1514|cathepsin L1##NM_145918|CTSL1|1514|cathepsin L1##AK075100|CTSL1|1514|cathepsin L1##BX648848|CTSL1|1514|cathepsin L1##AL832167|CTSL1|1514|cathepsin L1##BX647102|CTSL1|1514|cathepsin L1##BX647434|CTSL1|1514|cathepsin L1##BX537395|CTSL1|1514|cathepsin L1##BX647101|CTSL1|1514|cathepsin L1##BX647413|CTSL1|1514|cathepsin L1##BX647435|CTSL1|1514|cathepsin L1##BX648849|CTSL1|1514|cathepsin L1##BX649140|CTSL1|1514|cathepsin L1##X12451|CTSL1|1514|cathepsin L1##AF304301|CTSL1|1514|cathepsin L1##BC142983|CTSL1|1514|cathepsin L1##AF217997|CTSL1|1514|cathepsin L1	0.0	
chr10	131977997	131978120	reg1031002.p2	4.290	+	TSC_hg19_v1_chr10_+_131934681 AJ010841 AB463691	-43343	+	TSC_hg19_v1_chr10_+_131934675 AF118649 AK225609	-43383	+	TSC_hg19_v1_chr10_+_131934662 NM_001199868 NM_006541 BC005289 AK022131 AF118652	-43403	+	TSC_hg19_v1_chr10_-_133109808 BC093639 BC101535	1131762	-	BC042951 NM_174937 TSC_hg19_v1_chr10_-_133110013	1131943	-	CU692440 AB528671 U15174 BC009342 BC080643 TSC_hg19_v1_chr10_-_133795428 AK222626 AK295136 BC021989 AF002697 NM_004052	1817318	-	AJ010841|GLRX3|10539|glutaredoxin 3##AF118649|GLRX3|10539|glutaredoxin 3##AK225609|GLRX3|10539|glutaredoxin 3##NM_001199868|GLRX3|10539|glutaredoxin 3##NM_006541|GLRX3|10539|glutaredoxin 3##BC005289|GLRX3|10539|glutaredoxin 3##AK022131|GLRX3|10539|glutaredoxin 3##AF118652|GLRX3|10539|glutaredoxin 3##BC093639|TCERG1L|256536|transcription elongation regulator 1-like##BC101535|TCERG1L|256536|transcription elongation regulator 1-like##BC042951|TCERG1L|256536|transcription elongation regulator 1-like##NM_174937|TCERG1L|256536|transcription elongation regulator 1-like##U15174|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC009342|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC080643|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK222626|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK295136|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC021989|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AF002697|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_004052|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3	0.0	
chr11	118087704	118087847	reg1029321.p2	4.290	+	AK094399 NM_153206	-3702	-	NM_004588 TSC_hg19_v1_chr11_-_118047340	-40433	-	AF007783 BT019487 DQ892426 DQ892634 DQ895640 U87555 AY358945 BC036793 AF049498 AK308834 AK313891 TSC_hg19_v1_chr11_-_118047330	-40538	-	AK090409 AY138965 AY358362 AY093686 AK298722 AK300851 AK301099 AJ515553 NM_001098526	7983	-	TSC_hg19_v1_chr11_-_118123036 HQ258603 AY358626 NM_198275 AK095399 AK289390 AK296951 BC031223 AK304292 AK310966 BC113586 BC143897	35275	-	CU676056 TSC_hg19_v1_chr11_-_118134946	47134	-	AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##NM_004588|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AF007783|SCN2B|6327|sodium channel, voltage-gated, type II, beta##BT019487|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ892426|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ892634|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ895640|SCN2B|6327|sodium channel, voltage-gated, type II, beta##U87555|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AY358945|SCN2B|6327|sodium channel, voltage-gated, type II, beta##BC036793|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AF049498|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK308834|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK313891|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK090409|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AY138965|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AY358362|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AY093686|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK298722|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK300851|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK301099|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AJ515553|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##NM_001098526|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##HQ258603|MPZL3|196264|myelin protein zero-like 3##AY358626|MPZL3|196264|myelin protein zero-like 3##NM_198275|MPZL3|196264|myelin protein zero-like 3##AK095399|MPZL3|196264|myelin protein zero-like 3##AK289390|MPZL3|196264|myelin protein zero-like 3##AK296951|MPZL3|196264|myelin protein zero-like 3##BC031223|MPZL3|196264|myelin protein zero-like 3##AK304292|MPZL3|196264|myelin protein zero-like 3##AK310966|MPZL3|196264|myelin protein zero-like 3##BC113586|MPZL3|196264|myelin protein zero-like 3##BC143897|MPZL3|196264|myelin protein zero-like 3	0.0	
chr1	165883332	165883513	reg1000787.p1	4.290	+	AF236637 AK294537 TSC_hg19_v1_chr1_+_165797063 AB062451	-86336	+	TSC_hg19_v1_chr1_+_165796794 NM_012474 BC002906	-86651	+	AK124964 BC009228 TSC_hg19_v1_chr1_+_165738255 BC071770	-145201	+	TSC_hg19_v1_chr1_-_166135951 NM_001017961	252532	-	TSC_hg19_v1_chr1_-_166135982 AB593134	252563	-	TSC_hg19_v1_chr1_-_166136076 BC114214	252718	-	AF236637|UCK2|7371|uridine-cytidine kinase 2##AK294537|UCK2|7371|uridine-cytidine kinase 2##AB062451|UCK2|7371|uridine-cytidine kinase 2##NM_012474|UCK2|7371|uridine-cytidine kinase 2##BC002906|UCK2|7371|uridine-cytidine kinase 2##AK124964|LOC100147773|100147773|uncharacterized LOC100147773##BC009228|LOC100147773|100147773|uncharacterized LOC100147773##BC071770|LOC100147773|100147773|uncharacterized LOC100147773##NM_001017961|FAM78B|149297|family with sequence similarity 78, member B##BC114214|FAM78B|149297|family with sequence similarity 78, member B	0.0	
chr14	71786887	71786976	reg1031514.p1	4.290	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-412480	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-412798	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-511122	-	AF090989 AF090990 NM_015556	209110	+	AK294895 NM_001204423	611885	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	612222	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.0	
chr14	94952610	94952681	reg1002546.p1	4.290	+	AY358700 AY220120 AY220119 AK301082 BC111498 AY220121 AY220118 AY185496 AY185497 NM_001042518 NM_175739	-10054	-	BC146962 BX248259 NM_001080451	-33542	-	TSC_hg19_v1_chr14_-_94856973 BX161449 BX247968 AK315637 X05826 X05827 NM_001002235 NM_001002236 NM_001127700 NM_001127701 NM_001127702 NM_001127703 NM_001127704 NM_001127705 NM_001127706 NM_001127707	-95654	-	BC040857 NM_173850	31535	-	TSC_hg19_v1_chr14_+_95027778 AK309586 AK313196 BC014992 NM_006215 BX248760 BX248009	75155	+	NM_000624 TSC_hg19_v1_chr14_+_95047736 AK310869	95088	+	AY358700|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220120|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220119|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AK301082|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC111498|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220121|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220118|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185496|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185497|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_001042518|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_175739|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC146962|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##BX248259|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##NM_001080451|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##BX161449|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BX247968|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##AK315637|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X05826|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##X05827|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001002235|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001002236|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127700|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127701|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127702|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127703|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127704|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127705|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127706|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##NM_001127707|SERPINA1|5265|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1##BC040857|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12##NM_173850|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12##AK309586|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##AK313196|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##BC014992|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##NM_006215|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##BX248760|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##BX248009|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##NM_000624|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##AK310869|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5	0.0	
chr19	16695187	16695360	reg1032578.p1	4.290	+	TSC_hg19_v1_chr19_+_16683381 AK094229	-11876	+	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	-12077	-	TSC_hg19_v1_chr19_-_16653256 NM_006387	-42010	-	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	43727	-	TSC_hg19_v1_chr19_-_16770944 AK025602 BC069279 BX648276	75656	-	TSC_hg19_v1_chr19_-_16770956 NM_024104	75689	-	BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##NM_006387|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26##AK025602|C19orf42|79086|chromosome 19 open reading frame 42##BC069279|C19orf42|79086|chromosome 19 open reading frame 42##BX648276|C19orf42|79086|chromosome 19 open reading frame 42##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42	0.0	
chr19	3783760	3783896	reg1031767.p1	4.290	+	AY211277 BC007284 BC018709 BC032512 NM_032753	-11615	-	BC065273 TSC_hg19_v1_chr19_+_3762671	-21154	+	TSC_hg19_v1_chr19_+_3762669 NM_172251	-21168	+	X77278 AK225834 TSC_hg19_v1_chr19_-_3786266	2418	-	L18974 TSC_hg19_v1_chr19_-_3786289 AL137754 AK315646 AB593100	2469	-	TSC_hg19_v1_chr19_-_3786423 BC000114 BC003109 NM_139354 NM_139355	2583	-	AY211277|RAX2|84839|retina and anterior neural fold homeobox 2##BC007284|RAX2|84839|retina and anterior neural fold homeobox 2##BC018709|RAX2|84839|retina and anterior neural fold homeobox 2##BC032512|RAX2|84839|retina and anterior neural fold homeobox 2##NM_032753|RAX2|84839|retina and anterior neural fold homeobox 2##BC065273|MRPL54|116541|mitochondrial ribosomal protein L54##NM_172251|MRPL54|116541|mitochondrial ribosomal protein L54##X77278|MATK|4145|megakaryocyte-associated tyrosine kinase##AK225834|MATK|4145|megakaryocyte-associated tyrosine kinase##L18974|MATK|4145|megakaryocyte-associated tyrosine kinase##AL137754|MATK|4145|megakaryocyte-associated tyrosine kinase##AK315646|MATK|4145|megakaryocyte-associated tyrosine kinase##AB593100|MATK|4145|megakaryocyte-associated tyrosine kinase##BC000114|MATK|4145|megakaryocyte-associated tyrosine kinase##BC003109|MATK|4145|megakaryocyte-associated tyrosine kinase##NM_139354|MATK|4145|megakaryocyte-associated tyrosine kinase##NM_139355|MATK|4145|megakaryocyte-associated tyrosine kinase	0.828706	CTCF.p2:-27:0.829
chr2	110628952	110629133	reg1003423.p2	4.290	+	NM_005054 U64675	-77077	+	AL136868 NM_001037866 NM_001123363 NM_032260	-78708	+	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	-257097	+	BC094740 NM_001205288 NM_033514	26966	+	U17077 AB590150 DQ892870 DQ896118 TSC_hg19_v1_chr2_-_110873397 BC003179	244363	-	TSC_hg19_v1_chr2_-_110873536 AK311353	244523	-	NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57##BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##U17077|MALL|7851|mal, T-cell differentiation protein-like##DQ892870|MALL|7851|mal, T-cell differentiation protein-like##DQ896118|MALL|7851|mal, T-cell differentiation protein-like##BC003179|MALL|7851|mal, T-cell differentiation protein-like##AK311353|MALL|7851|mal, T-cell differentiation protein-like	0.0	
chr3	190102302	190102397	reg1007090.p2	4.290	+	BC012471 AF114837 AY358652 AF101051 AF134160 AK312866 AK225963 AK296934 TSC_hg19_v1_chr3_-_190040231 NM_021101	-62135	-	NM_001134418	-262124	-	NM_018192	-263442	-	AK314955 NM_006580	3311	+	CU687168 BC071780 AY358607 NM_207316	65281	-	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	129528	+	BC012471|CLDN1|9076|claudin 1##AF114837|CLDN1|9076|claudin 1##AY358652|CLDN1|9076|claudin 1##AF101051|CLDN1|9076|claudin 1##AF134160|CLDN1|9076|claudin 1##AK312866|CLDN1|9076|claudin 1##AK296934|CLDN1|9076|claudin 1##NM_021101|CLDN1|9076|claudin 1##NM_001134418|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##AK314955|CLDN16|10686|claudin 16##NM_006580|CLDN16|10686|claudin 16##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207##NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein	0.345458	CTCF.p2:-56:0.345
chr4	30717821	30717931	reg1032772.p1	4.290	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-3855336	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-4132196	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-4225891	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	4123	+	AB006757 TSC_hg19_v1_chr4_+_30722198	4318	+	TSC_hg19_v1_chr4_+_30722465 AB006756	4583	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.0	
chr5	14809874	14810026	reg1028651.p1	4.290	+	TSC_hg19_v1_chr5_+_14664826 BC015392	-145109	+	TSC_hg19_v1_chr5_+_14664772 NM_138348	-145174	+	AK123396 TSC_hg19_v1_chr5_-_14664742	-145223	-	DQ892588 DQ895806 AK222631 AK315012 BC014526 AF274753 AY358503 TSC_hg19_v1_chr5_-_14871888 AL833238 AB046801 BC009835 NM_054027	61905	-	TSC_hg19_v1_chr5_+_15500291 AB020647 NM_012304	690349	+	BC136424 TSC_hg19_v1_chr5_+_15500549	690594	+	BC015392|FAM105B|90268|family with sequence similarity 105, member B##NM_138348|FAM105B|90268|family with sequence similarity 105, member B##AK123396|LOC728178|728178|uncharacterized LOC728178##DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)##DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)##AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)##AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)##BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)##AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)##AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)##AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)##BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)##NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)##AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7	0.0	
chr6	14108963	14109143	reg1027434.p1	4.290	+	NM_001165033 AK090576 AX746519	-183610	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	-183887	+	NM_001165034	-184377	+	NM_001251901	8433	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	8852	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	8969	+	NM_001165033|RNF182|221687|ring finger protein 182##AK090576|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182##NM_001165034|RNF182|221687|ring finger protein 182##NM_001251901|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule	0.0	
chr6	42931724	42931821	reg1029552.p1	4.290	+	TSC_hg19_v1_chr6_+_42928491 BC032627 NM_018960 AF101477 AB590322 DQ890819 DQ893974	-3288	+	TSC_hg19_v1_chr6_+_42897237 BC008898 BC008961 AB527945 EU446764	-34501	+	TSC_hg19_v1_chr6_+_42897217 BC008133	-34563	+	AB051076 AB051077 AB051078 AB590555 BC033487 TSC_hg19_v1_chr6_-_42946920 BC048331 AK314237 AK225704	15137	-	AB208906 TSC_hg19_v1_chr6_-_42946954 D83703 NM_000287	15189	-	TSC_hg19_v1_chr6_+_42952307 AK299696	20512	+	BC032627|GNMT|27232|glycine N-methyltransferase##NM_018960|GNMT|27232|glycine N-methyltransferase##AF101477|GNMT|27232|glycine N-methyltransferase##DQ890819|GNMT|27232|glycine N-methyltransferase##DQ893974|GNMT|27232|glycine N-methyltransferase##BC008898|CNPY3|10695|canopy 3 homolog (zebrafish)##BC008961|CNPY3|10695|canopy 3 homolog (zebrafish)##EU446764|CNPY3|10695|canopy 3 homolog (zebrafish)##BC008133|CNPY3|10695|canopy 3 homolog (zebrafish)##AB051076|PEX6|5190|peroxisomal biogenesis factor 6##AB051077|PEX6|5190|peroxisomal biogenesis factor 6##AB051078|PEX6|5190|peroxisomal biogenesis factor 6##BC033487|PEX6|5190|peroxisomal biogenesis factor 6##BC048331|PEX6|5190|peroxisomal biogenesis factor 6##AK314237|PEX6|5190|peroxisomal biogenesis factor 6##AK225704|PEX6|5190|peroxisomal biogenesis factor 6##AB208906|PEX6|5190|peroxisomal biogenesis factor 6##D83703|PEX6|5190|peroxisomal biogenesis factor 6##NM_000287|PEX6|5190|peroxisomal biogenesis factor 6##AK299696|PPP2R5D|5528|protein phosphatase 2, regulatory subunit B', delta	0.979582	CTCF.p2:-24:0.980
chr9	100955423	100955569	reg1030310.p2	4.290	+	TSC_hg19_v1_chr9_-_100954922 AK292788 BC011690 AB209809 NM_052820	-563	-	NM_003389	-20323	-	TSC_hg19_v1_chr9_-_100881526 AK055833	-73952	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	62225	-	TSC_hg19_v1_chr9_-_101018013 NM_018421	62508	-	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	515689	-	AK292788|CORO2A|7464|coronin, actin binding protein, 2A##BC011690|CORO2A|7464|coronin, actin binding protein, 2A##AB209809|CORO2A|7464|coronin, actin binding protein, 2A##NM_052820|CORO2A|7464|coronin, actin binding protein, 2A##NM_003389|CORO2A|7464|coronin, actin binding protein, 2A##AK055833|TRIM14|9830|tripartite motif containing 14##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##NM_018421|TBC1D2|55357|TBC1 domain family, member 2##DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2	0.564565	CTCF.p2:-3:0.565
chr11	133280236	133280416	reg1026128.p1	4.289	+	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-466721	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-467312	-	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1498987	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	121988	-	AF521713 AK098717 NM_174927 BC058039	435055	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	546556	-	AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B	0.0	
chr1	24242091	24242194	reg1034980.p1	4.289	+	BC069722 NM_001841 X74328 FJ357036	-2338	-	CU675950 TSC_hg19_v1_chr1_-_24194781 M29877 AB074175 AK092914 AK095443 AK095455 AK225468 AK301302 AK310143 AK314649 AX747804 BC017338 AK295535 NM_000147	-47333	-	TSC_hg19_v1_chr1_-_24151934 NM_000191 NM_001166059	-90194	-	NM_017761 TSC_hg19_v1_chr1_+_24286310	44163	+	TSC_hg19_v1_chr1_+_24286317 AF151042 AK300522 BC068475 AK311305 BC001959 BC085018 BC078177 AF374386	44204	+	TSC_hg19_v1_chr1_-_24306818 AF449427 CU674556 AB528881 AY150180 AY150181 AF047448 AF067730 AY007101 BC010074 BC005039 AK001286 AK001656 BC071575 AF419331	64641	-	BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)##NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)##X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)##M29877|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AB074175|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK092914|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095443|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095455|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK225468|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK301302|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK310143|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK314649|FUCA1|2517|fucosidase, alpha-L- 1, tissue##BC017338|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK295535|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000147|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000191|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_001166059|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF449427|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150180|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150181|SRSF10|10772|serine/arginine-rich splicing factor 10##AF047448|SRSF10|10772|serine/arginine-rich splicing factor 10##AF067730|SRSF10|10772|serine/arginine-rich splicing factor 10##AY007101|SRSF10|10772|serine/arginine-rich splicing factor 10##BC010074|SRSF10|10772|serine/arginine-rich splicing factor 10##BC005039|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001286|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001656|SRSF10|10772|serine/arginine-rich splicing factor 10##BC071575|SRSF10|10772|serine/arginine-rich splicing factor 10##AF419331|SRSF10|10772|serine/arginine-rich splicing factor 10	0.055779	
chr12	45366738	45366828	reg1034036.p1	4.289	+	AK295125 NM_001145110	-59073	-	AK299733 NM_001145107	-96151	-	TSC_hg19_v1_chr12_-_45270158 NM_001145108 NM_006159	-96582	-	AK131230 NM_001004329 TSC_hg19_v1_chr12_-_45444883	78099	-	TSC_hg19_v1_chr12_+_45609769 AK126409 NM_001025356 NM_001142679 NM_001204803 AK310641	243001	+	TSC_hg19_v1_chr12_+_45609845 AK303996	243066	+	AK295125|NELL2|4753|NEL-like 2 (chicken)##NM_001145110|NELL2|4753|NEL-like 2 (chicken)##AK299733|NELL2|4753|NEL-like 2 (chicken)##NM_001145107|NELL2|4753|NEL-like 2 (chicken)##NM_001145108|NELL2|4753|NEL-like 2 (chicken)##NM_006159|NELL2|4753|NEL-like 2 (chicken)##AK131230|DBX2|440097|developing brain homeobox 2##NM_001004329|DBX2|440097|developing brain homeobox 2##AK126409|ANO6|196527|anoctamin 6##NM_001025356|ANO6|196527|anoctamin 6##NM_001142679|ANO6|196527|anoctamin 6##NM_001204803|ANO6|196527|anoctamin 6##AK310641|ANO6|196527|anoctamin 6##AK303996|ANO6|196527|anoctamin 6	0.685816	CTCF.p2:5:0.686
chr14	55575114	55575258	reg1028047.p2	4.289	+	AK025580 TSC_hg19_v1_chr14_+_55518408 BC015621	-56755	+	TSC_hg19_v1_chr14_+_55518382 AL834285	-56809	+	TSC_hg19_v1_chr14_+_55518364 NM_144578 AK315501	-56846	+	TSC_hg19_v1_chr14_+_55595963 NM_001177388 NM_002306 AK314929	20762	+	TSC_hg19_v1_chr14_+_55595969 AB006780 BC053667 BC068068 M36682 BC001120 M35368 M57710	20799	+	TSC_hg19_v1_chr14_-_55650349 BT007344	75220	-	AK025580|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##BC015621|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##AL834285|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##NM_144578|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##AK315501|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##NM_001177388|LGALS3|3958|lectin, galactoside-binding, soluble, 3##NM_002306|LGALS3|3958|lectin, galactoside-binding, soluble, 3##AK314929|LGALS3|3958|lectin, galactoside-binding, soluble, 3##AB006780|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC053667|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC068068|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M36682|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC001120|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M35368|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M57710|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5	0.0	
chr3	146045024	146045203	reg1034570.p1	4.289	+	TSC_hg19_v1_chr3_-_145968970 BC028354 NM_001128306 NM_001177304 NM_020353	-76149	-	AY550971 TSC_hg19_v1_chr3_-_145968931 AK128442 AK292815 AF199023 AL833760 AK312809	-76238	-	TSC_hg19_v1_chr3_-_145879223 NM_000935 NM_182943	-165862	-	AK301909 NM_001199978	141974	-	AF159441 BC055415 NM_001199979	168636	-	TSC_hg19_v1_chr3_-_146262279 BC070251	217179	-	BC028354|PLSCR4|57088|phospholipid scramblase 4##NM_001128306|PLSCR4|57088|phospholipid scramblase 4##NM_001177304|PLSCR4|57088|phospholipid scramblase 4##NM_020353|PLSCR4|57088|phospholipid scramblase 4##AY550971|PLSCR4|57088|phospholipid scramblase 4##AK128442|PLSCR4|57088|phospholipid scramblase 4##AK292815|PLSCR4|57088|phospholipid scramblase 4##AF199023|PLSCR4|57088|phospholipid scramblase 4##AL833760|PLSCR4|57088|phospholipid scramblase 4##AK312809|PLSCR4|57088|phospholipid scramblase 4##NM_000935|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_182943|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AK301909|PLSCR2|57047|phospholipid scramblase 2##NM_001199978|PLSCR2|57047|phospholipid scramblase 2##AF159441|PLSCR2|57047|phospholipid scramblase 2##BC055415|PLSCR2|57047|phospholipid scramblase 2##NM_001199979|PLSCR2|57047|phospholipid scramblase 2##BC070251|PLSCR1|5359|phospholipid scramblase 1	0.0	
chr3	99364135	99364255	reg1024382.p1	4.289	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	-6745	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-743703	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-912608	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	172550	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	230796	-	BC017987 NM_001042459 NM_182909 AF329092 AX776292	469157	-	AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like	0.370765	CTCF.p2:-10:0.371
chr8	4732996	4733136	reg1032795.p1	4.289	+	AK128880 TSC_hg19_v1_chr8_-_2585966	-2147084	-	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-2739864	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-2780158	+	AY017307 TSC_hg19_v1_chr8_-_4852228	119159	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	119228	-	TSC_hg19_v1_chr8_-_6264053 BC036625	1530991	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.997181	CTCF.p2:-8:0.997
chr1	14893689	14893821	reg1033909.p1	4.288	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-817814	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-817832	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-817870	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	31439	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	356964	+	AY505121 NM_001018001	362540	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.693201	CTCF.p2:9:0.693
chr16	11059622	11059726	reg1034896.p2	4.288	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-21231	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-23439	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-23508	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	290376	-	X63758 BC096135 BC096136 BC096137 NM_005425	303464	-	NM_021247	307777	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr19	3987890	3988039	reg1036483.p1	4.288	+	AK297398 AK298498 NM_001961 TSC_hg19_v1_chr19_-_3985462	-2502	-	TSC_hg19_v1_chr19_-_3985455 BC126259 BC136313 BC068002 BC006547 AK299225	-2563	-	TSC_hg19_v1_chr19_-_3984195 AB527843 AY942181 HQ258667 X51466 Z11692	-3713	-	TSC_hg19_v1_chr19_+_4007733 BC066895 AK022481 BC029874 NM_015897 AK222726 AB464092 AF077952 DQ892419 DQ895633 BC010047	19765	+	TSC_hg19_v1_chr19_-_4065504 BC084568	77532	-	BC113511 TSC_hg19_v1_chr19_-_4066828 AF000561 NM_015898 BC064505	78853	-	AK297398|EEF2|1938|eukaryotic translation elongation factor 2##AK298498|EEF2|1938|eukaryotic translation elongation factor 2##NM_001961|EEF2|1938|eukaryotic translation elongation factor 2##BC126259|EEF2|1938|eukaryotic translation elongation factor 2##BC136313|EEF2|1938|eukaryotic translation elongation factor 2##BC006547|EEF2|1938|eukaryotic translation elongation factor 2##AK299225|EEF2|1938|eukaryotic translation elongation factor 2##AY942181|EEF2|1938|eukaryotic translation elongation factor 2##HQ258667|EEF2|1938|eukaryotic translation elongation factor 2##X51466|EEF2|1938|eukaryotic translation elongation factor 2##Z11692|EEF2|1938|eukaryotic translation elongation factor 2##BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4##AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4##BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4##NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4##AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4##AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4##DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4##DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4##BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4##BC084568|ZBTB7A|51341|zinc finger and BTB domain containing 7A##BC113511|ZBTB7A|51341|zinc finger and BTB domain containing 7A##AF000561|ZBTB7A|51341|zinc finger and BTB domain containing 7A##NM_015898|ZBTB7A|51341|zinc finger and BTB domain containing 7A	0.715192	CTCF.p2:-1:0.715
chr3	15373783	15373849	reg1020385.p1	4.288	+	TSC_hg19_v1_chr3_+_15247768 AB028639 BC056202 AK314253 CU691130	-125862	+	TSC_hg19_v1_chr3_+_15247736 NM_014296	-126082	+	TSC_hg19_v1_chr3_-_15140655 AK291288 AK301735 AL833545 NM_022340	-233163	-	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	125	-	TSC_hg19_v1_chr3_-_15374094 AL117422 AK313167 NM_004844	281	-	BC006169 NM_001018009	9071	-	AB028639|CAPN7|23473|calpain 7##BC056202|CAPN7|23473|calpain 7##AK314253|CAPN7|23473|calpain 7##NM_014296|CAPN7|23473|calpain 7##AK291288|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AK301735|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AL833545|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_022340|ZFYVE20|64145|zinc finger, FYVE domain containing 20##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AL117422|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AK313167|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_004844|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC006169|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_001018009|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	0.0	
chr8	126650152	126650218	reg1032774.p2	4.288	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-207606	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-546088	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-546128	-	TSC_hg19_v1_chr8_-_126963395 BX648371	313228	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	920370	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	920539	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.0	
chr9	129932577	129932709	reg1031930.p1	4.288	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-47613	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-47681	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-47735	-	NM_032293 AK293732 AK095679	94164	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	226803	+	TSC_hg19_v1_chr9_-_130186602 AK124330	253923	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.0	
chr10	81688945	81689118	reg1000331.p1	4.287	+	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	-318327	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	-368880	-	BC070048 NM_001099692	-416675	+	BC022318 NM_003019	19829	-	TSC_hg19_v1_chr10_+_81838420 AK222536 AK023325 BC022252 NM_025125 CR457310	149405	+	BC066348 BC090922 NM_001012973	203226	+	AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##BC022318|SFTPD|6441|surfactant protein D##NM_003019|SFTPD|6441|surfactant protein D##AK222536|FAM213A|80195|family with sequence similarity 213, member A##AK023325|FAM213A|80195|family with sequence similarity 213, member A##BC022252|FAM213A|80195|family with sequence similarity 213, member A##NM_025125|FAM213A|80195|family with sequence similarity 213, member A##CR457310|FAM213A|80195|family with sequence similarity 213, member A##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9	0.0	
chr11	28696050	28696144	reg1027786.p1	4.287	+	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-564244	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-566219	+	TSC_hg19_v1_chr11_-_28129704 BC026090 NM_031217	-566374	-	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	1342434	-	NM_000510 NM_001018080	1556465	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	1648555	+	BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##BC026090|KIF18A|81930|kinesin family member 18A##NM_031217|KIF18A|81930|kinesin family member 18A##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46	0.999756	CTCF.p2:1:1.000
chr13	42951728	42951879	reg1028082.p1	4.287	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	-105518	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	-239593	+	NM_152910 NM_178009 AB078967 AB078968	-328938	+	BC040889 NM_033012	185068	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	196531	+	NM_182508 AK310859 AK098238 BC093659 BC112237	403921	+	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30	0.0	
chr20	25039114	25039213	reg1030120.p2	4.287	+	AL832939 BC114612 AK314440 TSC_hg19_v1_chr20_-_25038780 BC044588 BC055008 AK127566 BC039261 NM_001252675 NM_001252677 NM_032501	-484	-	AK125058 AK296306 NM_001252676	-25839	-	TSC_hg19_v1_chr20_-_24973410 NM_020531 AK301959	-65676	-	BC126228 BC136497 AF251033 AF251034 DQ854807 DQ854808 DQ854809 DQ854810 DQ854811 DQ854812 NM_014588 NM_199425	23598	-	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	137207	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	137317	+	AL832939|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC114612|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK314440|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC044588|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC055008|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK127566|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC039261|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252675|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252677|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_032501|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK125058|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK296306|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252676|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_020531|C20orf3|57136|chromosome 20 open reading frame 3##AK301959|C20orf3|57136|chromosome 20 open reading frame 3##BC126228|VSX1|30813|visual system homeobox 1##BC136497|VSX1|30813|visual system homeobox 1##AF251033|VSX1|30813|visual system homeobox 1##AF251034|VSX1|30813|visual system homeobox 1##DQ854807|VSX1|30813|visual system homeobox 1##DQ854808|VSX1|30813|visual system homeobox 1##DQ854809|VSX1|30813|visual system homeobox 1##DQ854810|VSX1|30813|visual system homeobox 1##DQ854811|VSX1|30813|visual system homeobox 1##DQ854812|VSX1|30813|visual system homeobox 1##NM_014588|VSX1|30813|visual system homeobox 1##NM_199425|VSX1|30813|visual system homeobox 1##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)	0.0	
chr3	165731008	165731115	reg1031647.p1	4.287	+	NM_000055 TSC_hg19_v1_chr3_-_165555283	-175794	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	-175868	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	-816556	-	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	1367016	-	AK226025 AB006423 NM_006217 AK293391	1460759	-	BC035512 NM_178824	1640227	-	NM_000055|BCHE|590|butyrylcholinesterase##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing##AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##BC035512|WDR49|151790|WD repeat domain 49##NM_178824|WDR49|151790|WD repeat domain 49	0.99824	CTCF.p2:0:0.998
chr7	100965469	100965563	reg1030600.p2	4.287	+	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	-478	-	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-69950	-	TSC_hg19_v1_chr7_-_100888367 NM_016068	-77146	-	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	40701	+	BC002778 NM_138403	307059	-	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	493693	+	BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##NM_016068|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1	0.785934	CTCF.p2:28:0.786
chr8	60127718	60127832	reg1028834.p1	4.287	+	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	-96103	-	NM_003580 TSC_hg19_v1_chr8_-_59572413	-555364	-	BC041124 TSC_hg19_v1_chr8_-_59572386	-555389	-	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	1066146	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	1301665	+	AK297576 TSC_hg19_v1_chr8_+_61429494	1301719	+	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC041124|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family##AK297576|RAB2A|5862|RAB2A, member RAS oncogene family	0.044531	
chr1	181122274	181122454	reg1033627.p2	4.286	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-64499	+	NM_016545	-64727	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-119214	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	330336	+	BC137223 BC137224 AK128654 NM_001009992	908433	-	TSC_hg19_v1_chr1_-_182354649 AK301600	1232318	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.039431	
chr12	76479025	76479131	reg1033072.p1	4.286	+	NM_004537 NM_139207	-341	-	TSC_hg19_v1_chr12_-_76478466 BC002387 AL162068 AK122670 AK298936 D28430 AK297500 AK304787	-590	-	TSC_hg19_v1_chr12_-_76478393 AK295147 M86667	-700	-	TSC_hg19_v1_chr12_-_76742196 AK304178 BC026355 NM_024685	263116	-	AB040884 TSC_hg19_v1_chr12_-_76953317 AK289997 CR749542	474213	-	BC111728 TSC_hg19_v1_chr12_-_76953484	474405	-	NM_004537|NAP1L1|4673|nucleosome assembly protein 1-like 1##NM_139207|NAP1L1|4673|nucleosome assembly protein 1-like 1##BC002387|NAP1L1|4673|nucleosome assembly protein 1-like 1##AL162068|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK122670|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK298936|NAP1L1|4673|nucleosome assembly protein 1-like 1##D28430|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK297500|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK304787|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK295147|NAP1L1|4673|nucleosome assembly protein 1-like 1##M86667|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK304178|BBS10|79738|Bardet-Biedl syndrome 10##BC026355|BBS10|79738|Bardet-Biedl syndrome 10##NM_024685|BBS10|79738|Bardet-Biedl syndrome 10##AB040884|OSBPL8|114882|oxysterol binding protein-like 8##AK289997|OSBPL8|114882|oxysterol binding protein-like 8##CR749542|OSBPL8|114882|oxysterol binding protein-like 8##BC111728|OSBPL8|114882|oxysterol binding protein-like 8	0.119707	
chr15	49447860	49447963	reg1030012.p1	4.286	+	AF120268 L40388 TSC_hg19_v1_chr15_-_49447811 AB462991 CR542063 CU680378 EU446744 EU831466 EU831553 AK222590 AB209799 AF100762 AF212227 AF084260 BC012629 AK312643 AK295598 NM_001143887 NM_004236	-102	-	CU689588 AB385300 TSC_hg19_v1_chr15_-_49338644 D87445 AK307480 AK308183 BC008635 BC033001 NM_001193489 NM_014701	-109275	-	BC033907 NM_203349	-192271	-	TSC_hg19_v1_chr15_+_49447990 AF461816 AL832745 NM_001001556	80	+	TSC_hg19_v1_chr15_+_49462423 NM_002044 AK301361 BC005141 AK098049 AK316440 M84443 BT006901 CU675015 DQ890583 DQ893742	14552	+	NM_002009 BC010956 AK313160 M60828 S81661	267505	+	AF120268|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##L40388|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##CR542063|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU446744|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831466|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831553|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK222590|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AB209799|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF100762|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF212227|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF084260|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##BC012629|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK312643|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK295598|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_001143887|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_004236|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##D87445|SECISBP2L|9728|SECIS binding protein 2-like##AK307480|SECISBP2L|9728|SECIS binding protein 2-like##AK308183|SECISBP2L|9728|SECIS binding protein 2-like##BC008635|SECISBP2L|9728|SECIS binding protein 2-like##BC033001|SECISBP2L|9728|SECIS binding protein 2-like##NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like##NM_014701|SECISBP2L|9728|SECIS binding protein 2-like##BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##AF461816|GALK2|2585|galactokinase 2##AL832745|GALK2|2585|galactokinase 2##NM_001001556|GALK2|2585|galactokinase 2##NM_002044|GALK2|2585|galactokinase 2##AK301361|GALK2|2585|galactokinase 2##BC005141|GALK2|2585|galactokinase 2##AK098049|GALK2|2585|galactokinase 2##AK316440|GALK2|2585|galactokinase 2##M84443|GALK2|2585|galactokinase 2##BT006901|GALK2|2585|galactokinase 2##DQ890583|GALK2|2585|galactokinase 2##DQ893742|GALK2|2585|galactokinase 2##NM_002009|FGF7|2252|fibroblast growth factor 7##BC010956|FGF7|2252|fibroblast growth factor 7##AK313160|FGF7|2252|fibroblast growth factor 7##M60828|FGF7|2252|fibroblast growth factor 7##S81661|FGF7|2252|fibroblast growth factor 7	0.0	
chr2	62636251	62636383	reg1005737.p2	4.286	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-213051	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-503488	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-520531	-	BC047439 AK091902 AX747245 NM_198276	97222	-	AK292545 NM_001142615	264668	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	296649	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr2	86315240	86315323	reg1034934.p1	4.286	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-199195	-	AY152815 NM_001042437	-220489	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-334276	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	17702	-	NM_015425	17996	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	18060	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.77806	CTCF.p2:-8:0.778
chr6	22654621	22654801	reg1033496.p2	4.286	+	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	-84986	+	X54394 X54393 GQ305133 M58594 NM_001163558	-351664	-	BC015850 NM_000948	-356982	-	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	1471719	+	AF181722 NM_181337	1702419	+	AF181721 NM_016356	1703568	-	NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1##AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2	0.0	
chr6	72751920	72752047	reg1034771.p1	4.286	+	TSC_hg19_v1_chr6_+_72596702 AY190519	-155271	+	BC151853 AB002338 BC152435 NM_014989 TSC_hg19_v1_chr6_+_72596658	-155330	+	AB045726 AB051866 TSC_hg19_v1_chr6_+_72596447	-155555	+	TSC_hg19_v1_chr6_+_72892371 AK295177	140429	+	AK294868 NM_001168407 NM_001168408 AK311105 AK295001	170571	+	AK309185 NM_001168409	174161	+	AY190519|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC151853|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB002338|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC152435|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_014989|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK295177|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK294868|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001168407|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001168408|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK311105|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK295001|RIMS1|22999|regulating synaptic membrane exocytosis 1##AK309185|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_001168409|RIMS1|22999|regulating synaptic membrane exocytosis 1	0.160533	
chr11	121353198	121353353	reg1036410.p1	4.285	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-30100	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	-30326	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	-189721	+	TSC_hg19_v1_chr11_+_121461071 AK294404	107823	+	BC130361 BC130363 AF303179 NM_001001786	633586	-	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	1173272	+	AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B	0.0	
chr1	1580379	1580485	reg1031871.p1	4.285	+	AK297700 AB010962 AJ005256 NM_006983 BC025719 AB010961 AF056200	-12862	+	TSC_hg19_v1_chr1_+_1551275 NM_001170689 AK128167 BC035109 AK098785	-29132	+	TSC_hg19_v1_chr1_-_1551178 BC035078	-29311	-	BC054019 TSC_hg19_v1_chr1_-_1590434 BC104661 BC009375	10021	-	TSC_hg19_v1_chr1_-_1623947 CR936618 BC062371	43533	-	BC092507 TSC_hg19_v1_chr1_-_1624149 AK125619	43726	-	AK297700|MMP23B|8510|matrix metallopeptidase 23B##AB010962|MMP23B|8510|matrix metallopeptidase 23B##AJ005256|MMP23B|8510|matrix metallopeptidase 23B##NM_006983|MMP23B|8510|matrix metallopeptidase 23B##BC025719|MMP23B|8510|matrix metallopeptidase 23B##AB010961|MMP23B|8510|matrix metallopeptidase 23B##AF056200|MMP23B|8510|matrix metallopeptidase 23B##NM_001170689|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK128167|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC035109|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK098785|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC035078|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC054019|CDK11A|728642|cyclin-dependent kinase 11A##BC104661|CDK11A|728642|cyclin-dependent kinase 11A##BC009375|CDK11B|984|cyclin-dependent kinase 11B##CR936618|SLC35E2B|728661|solute carrier family 35, member E2B##BC062371|SLC35E2|9906|solute carrier family 35, member E2##BC092507|SLC35E2B|728661|solute carrier family 35, member E2B##AK125619|SLC35E2B|728661|solute carrier family 35, member E2B	0.928482	CTCF.p2:2:0.928
chr1	204450718	204450845	reg1033891.p1	4.285	+	TSC_hg19_v1_chr1_-_204380946 BC065280 AK222877 NM_032833 AK027650 AK303535 AK316092	-69841	-	TSC_hg19_v1_chr1_+_204380508 BC009873	-70260	+	AB023186 BC152475 NM_014935 TSC_hg19_v1_chr1_-_204329058	-121731	-	BC132876 BC136645 BC144342 NM_002646 AK308153	8717	-	TSC_hg19_v1_chr1_-_204463934 BC094741	12984	-	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	34721	+	BC065280|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK222877|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_032833|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK027650|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK303535|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AB023186|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC152475|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##NM_014935|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC132876|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC136645|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC144342|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_002646|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AK308153|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)	0.505517	CTCF.p2:-12:0.506
chr14	34110720	34110901	reg1033702.p1	4.285	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-702320	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1312274	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-1564304	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	309339	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	820677	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	898075	-	AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein	0.042638	
chr15	74714964	74715144	reg1030348.p1	4.285	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-55051	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-56519	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-104149	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	10975	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	11258	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	38393	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.0	
chr17	56401797	56401933	reg1037065.p1	4.285	+	J02694 X04876 M19507 NM_000250 TSC_hg19_v1_chr17_-_56358297	-43566	-	TSC_hg19_v1_chr17_-_56358164 BC130476	-43700	-	HQ258645 S56200 TSC_hg19_v1_chr17_-_56358145	-43733	-	AB014512 BC150279 NM_004758 NM_024418	4270	-	TSC_hg19_v1_chr17_+_56406294 AK311311 AK311208	4469	+	AX721088 TSC_hg19_v1_chr17_-_56409882	8012	-	J02694|MPO|4353|myeloperoxidase##X04876|MPO|4353|myeloperoxidase##M19507|MPO|4353|myeloperoxidase##NM_000250|MPO|4353|myeloperoxidase##BC130476|MPO|4353|myeloperoxidase##HQ258645|MPO|4353|myeloperoxidase##S56200|MPO|4353|myeloperoxidase##AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##AK311311|LOC100506779|100506779|uncharacterized LOC100506779##AK311208|LOC100506779|100506779|uncharacterized LOC100506779	0.0	
chr2	231838873	231839024	reg1027967.p1	4.285	+	BC032694 NM_005683	-49008	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-109226	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-109270	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	21944	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	63289	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	82629	+	BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.0	
chr2	3622703	3622831	reg1034495.p1	4.285	+	TSC_hg19_v1_chr2_-_3605926 AF039652 NM_002936	-16825	-	TSC_hg19_v1_chr2_-_3605921 BC002973	-16846	-	AJ224117 BT019670 CR541820 DQ892597 DQ895824 TSC_hg19_v1_chr2_-_3605880 AF048994 AK096913 AF048995 AK075490	-16888	-	TSC_hg19_v1_chr2_-_3622741 AK125306	12	-	TSC_hg19_v1_chr2_+_3622852 NM_001011 BC061901	86	+	TSC_hg19_v1_chr2_+_3622901 BC002866	132	+	AF039652|RNASEH1|246243|ribonuclease H1##NM_002936|RNASEH1|246243|ribonuclease H1##BC002973|RNASEH1|246243|ribonuclease H1##AJ224117|RNASEH1|246243|ribonuclease H1##BT019670|RNASEH1|246243|ribonuclease H1##CR541820|RNASEH1|246243|ribonuclease H1##DQ892597|RNASEH1|246243|ribonuclease H1##DQ895824|RNASEH1|246243|ribonuclease H1##AF048994|RNASEH1|246243|ribonuclease H1##AK096913|RNASEH1|246243|ribonuclease H1##AF048995|RNASEH1|246243|ribonuclease H1##AK075490|RNASEH1|246243|ribonuclease H1##NM_001011|RPS7|6201|ribosomal protein S7##BC061901|RPS7|6201|ribosomal protein S7##BC002866|RPS7|6201|ribosomal protein S7	0.0	
chr7	33499228	33499375	reg1010543.p2	4.285	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-330220	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-350324	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-396979	-	AK289963 NM_133468 AK096150 BC060868	445841	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	1198618	+	DQ287932 NM_015283	1578351	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	0.946682	CTCF.p2:5:0.947
chr10	53975568	53975634	reg1013420.p1	4.284	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-516254	-	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-1141310	+	TSC_hg19_v1_chr10_+_52751129 D45864	-1224480	+	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	98514	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	555825	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2585397	-	AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##D45864|PRKG1|5592|protein kinase, cGMP-dependent, type I##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15	0.988529	
chr10	65736451	65736553	reg1031389.p1	4.284	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-455261	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-455340	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-455387	+	NM_178011 BX640611 AY358315 BC111492	2949313	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	3688894	-	AF091606 AK313882 NM_013266	3719435	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.522011	CTCF.p2:-10:0.522
chr12	860683	860817	reg1003069.p2	4.284	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-88035	-	TSC_hg19_v1_chr12_-_752800 AK298043	-107931	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-108572	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	1406	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	2006	+	BC013629 TSC_hg19_v1_chr12_+_1017145	156332	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr17	2833448	2833564	reg1031111.p1	4.284	+	AJ628446 AJ628447 NM_001100398 NM_015085 TSC_hg19_v1_chr17_+_2699761 CR627427 BC140870 BC140871	-133753	+	AK124640 TSC_hg19_v1_chr17_+_2680496	-153083	+	NM_015229 TSC_hg19_v1_chr17_-_2615039	-218519	-	BC106876 NM_014566 AB529301	133421	-	AB529300 BC069552 BC106735 BC106736 NM_002548	162783	-	BC069379 NM_003555 BC095520 AB529303	197395	-	AJ628446|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AJ628447|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_001100398|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015085|RAP1GAP2|23108|RAP1 GTPase activating protein 2##CR627427|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140870|RAP1GAP2|23108|RAP1 GTPase activating protein 2##BC140871|RAP1GAP2|23108|RAP1 GTPase activating protein 2##AK124640|RAP1GAP2|23108|RAP1 GTPase activating protein 2##NM_015229|KIAA0664|23277|KIAA0664##BC106876|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##NM_014566|OR1D5|8386|olfactory receptor, family 1, subfamily D, member 5##BC069552|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106735|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC106736|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##NM_002548|OR1D2|4991|olfactory receptor, family 1, subfamily D, member 2##BC069379|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1##NM_003555|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1##BC095520|OR1G1|8390|olfactory receptor, family 1, subfamily G, member 1	0.158748	
chr20	53263283	53263463	reg1005752.p1	4.284	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-171159	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	-438736	+	TSC_hg19_v1_chr20_+_52824396 NM_002623	-438926	+	NM_080617	1316638	-	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	1560414	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	1670651	+	BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##NM_002623|PFDN4|5203|prefoldin subunit 4##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B	0.0	
chr2	194828377	194828510	reg1037620.p1	4.284	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-1768814	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	-1769129	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-2116472	-	BC029413 NM_001127257 CR749813	1693132	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	1693465	+	AB463018 AF327442 AK094515 NM_018897 AB023161	2105052	-	BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7	0.0	
chr3	139048162	139048309	reg1008254.p1	4.284	+	AK128089 NM_001134657	-284502	-	BC137146 BC137145 AK127998 NM_001013650	-308477	-	NM_001134659	-323126	-	TSC_hg19_v1_chr3_+_139062861 AF226045 NM_020191 AF063603 AK292852 BC009296 AK075436 AB208981	14655	+	TSC_hg19_v1_chr3_-_139108462 AK304219 X70476 BC000326	60209	-	TSC_hg19_v1_chr3_-_139108486 AK128561	60262	-	AK128089|PRR23C|389152|proline rich 23C##NM_001134657|PRR23C|389152|proline rich 23C##BC137146|PRR23B|389151|proline rich 23B##BC137145|PRR23B|389151|proline rich 23B##AK127998|PRR23B|389151|proline rich 23B##NM_001013650|PRR23B|389151|proline rich 23B##NM_001134659|PRR23A|729627|proline rich 23A##AF226045|MRPS22|56945|mitochondrial ribosomal protein S22##NM_020191|MRPS22|56945|mitochondrial ribosomal protein S22##AF063603|MRPS22|56945|mitochondrial ribosomal protein S22##AK292852|MRPS22|56945|mitochondrial ribosomal protein S22##BC009296|MRPS22|56945|mitochondrial ribosomal protein S22##AK075436|MRPS22|56945|mitochondrial ribosomal protein S22##AB208981|MRPS22|56945|mitochondrial ribosomal protein S22##AK304219|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##X70476|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##BC000326|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)	0.0	
chr6	43231518	43231698	reg1000548.p2	4.284	+	NM_032538 TSC_hg19_v1_chr6_+_43211227	-20380	+	TSC_hg19_v1_chr6_-_43197220 BC011683 AF040105 NM_006443 NM_199184 EU585603	-34409	-	TSC_hg19_v1_chr6_+_43149926 BC028159	-81671	+	TSC_hg19_v1_chr6_+_43265994 NM_006672 NM_153320 AF097518	34389	+	TSC_hg19_v1_chr6_+_43266009 AK290806 AK309570 AK314822 BC033805 AK290796 BC017963 DQ893614 DQ896844 AF210455 AY050498	34444	+	AB463553 AY555741 AY555742 AY555743 AY555744 NM_206922	44921	-	NM_032538|TTBK1|84630|tau tubulin kinase 1##BC011683|C6orf108|10591|chromosome 6 open reading frame 108##AF040105|C6orf108|10591|chromosome 6 open reading frame 108##NM_006443|C6orf108|10591|chromosome 6 open reading frame 108##NM_199184|C6orf108|10591|chromosome 6 open reading frame 108##EU585603|C6orf108|10591|chromosome 6 open reading frame 108##BC028159|CUL9|23113|cullin 9##NM_006672|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_153320|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF097518|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290806|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK309570|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK314822|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC033805|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290796|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC017963|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ893614|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ896844|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF210455|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AY050498|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AY555741|CRIP3|401262|cysteine-rich protein 3##AY555742|CRIP3|401262|cysteine-rich protein 3##AY555743|CRIP3|401262|cysteine-rich protein 3##AY555744|CRIP3|401262|cysteine-rich protein 3##NM_206922|CRIP3|401262|cysteine-rich protein 3	0.0	
chr8	142179303	142179385	reg1027480.p1	4.284	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-40607	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-168088	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-533720	-	AK128212 NM_001080431	59328	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	84846	-	NM_005293	198020	-	NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.996452	CTCF.p2:-20:0.996
chr8	69985245	69985321	reg1030291.p1	4.284	+	BC041961 NM_001195639 NM_052958	-742327	+	AK294299 TSC_hg19_v1_chr8_+_68864738	-1120553	+	TSC_hg19_v1_chr8_+_68864614 AY570973	-1120650	+	AK095341 NM_001128204 NM_015170 TSC_hg19_v1_chr8_+_70378858 AF545571	393582	+	TSC_hg19_v1_chr8_+_70379077 AK307951	393797	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	419756	+	BC041961|C8orf34|116328|chromosome 8 open reading frame 34##NM_001195639|C8orf34|116328|chromosome 8 open reading frame 34##NM_052958|C8orf34|116328|chromosome 8 open reading frame 34##AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AK095341|SULF1|23213|sulfatase 1##NM_001128204|SULF1|23213|sulfatase 1##NM_015170|SULF1|23213|sulfatase 1##AF545571|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1	0.711231	CTCF.p2:-3:0.711
chr1	179679617	179679684	reg1029938.p2	4.283	+	AK092142 AX747378 NM_001199092	-104289	+	NM_001199089 AK127370 BC130532 BC144058	-118644	+	AK126889 NM_001199091 NM_001199085 NM_173533	-118899	+	AY902195 BC009382 NM_173509 TSC_hg19_v1_chr1_+_179712397	32701	+	TSC_hg19_v1_chr1_+_179712425 AK310711	32774	+	AK313887 TSC_hg19_v1_chr1_+_179712524	32866	+	AK092142|TDRD5|163589|tudor domain containing 5##NM_001199092|TDRD5|163589|tudor domain containing 5##NM_001199089|TDRD5|163589|tudor domain containing 5##AK127370|TDRD5|163589|tudor domain containing 5##BC130532|TDRD5|163589|tudor domain containing 5##BC144058|TDRD5|163589|tudor domain containing 5##AK126889|TDRD5|163589|tudor domain containing 5##NM_001199091|TDRD5|163589|tudor domain containing 5##NM_001199085|TDRD5|163589|tudor domain containing 5##NM_173533|TDRD5|163589|tudor domain containing 5##AY902195|FAM163A|148753|family with sequence similarity 163, member A##BC009382|FAM163A|148753|family with sequence similarity 163, member A##NM_173509|FAM163A|148753|family with sequence similarity 163, member A##AK310711|FAM163A|148753|family with sequence similarity 163, member A##AK313887|FAM163A|148753|family with sequence similarity 163, member A	0.0	
chr1	1830746	1830840	reg1027079.p1	4.283	+	TSC_hg19_v1_chr1_-_1822565 AK122949	-8225	-	TSC_hg19_v1_chr1_-_1822527 NM_002074	-8272	-	AK312614 TSC_hg19_v1_chr1_-_1822502	-8291	-	AF490905 AY566229 NM_138705	15472	+	AB528804 GQ129259 GQ129260 TSC_hg19_v1_chr1_-_1850719 NM_178545	19928	-	AK127388 NM_001080484	104482	-	AK122949|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##NM_002074|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##AK312614|GNB1|2782|guanine nucleotide binding protein (G protein), beta polypeptide 1##AF490905|CALML6|163688|calmodulin-like 6##AY566229|CALML6|163688|calmodulin-like 6##NM_138705|CALML6|163688|calmodulin-like 6##GQ129259|TMEM52|339456|transmembrane protein 52##GQ129260|TMEM52|339456|transmembrane protein 52##NM_178545|TMEM52|339456|transmembrane protein 52##AK127388|KIAA1751|85452|KIAA1751##NM_001080484|KIAA1751|85452|KIAA1751	0.174743	
chr18	54376839	54377019	reg1031536.p2	4.283	+	TSC_hg19_v1_chr18_+_54318593 AK057141 NM_015285 NM_052834 AB011113 BC150282	-58323	+	TSC_hg19_v1_chr18_-_54305956 BC001156 AF003938 NM_004786	-71015	-	AB209263 DQ891846 DQ895034 EU176640 TSC_hg19_v1_chr18_-_54305824 AF051896 AF052659 AK313653	-71182	-	TSC_hg19_v1_chr18_+_54424445 BC050352	47519	+	AK127964 TSC_hg19_v1_chr18_+_54814333 BC021740 BC035018 AK301799	437410	+	AB208996 NM_015879	642791	+	AK057141|WDR7|23335|WD repeat domain 7##NM_015285|WDR7|23335|WD repeat domain 7##NM_052834|WDR7|23335|WD repeat domain 7##AB011113|WDR7|23335|WD repeat domain 7##BC150282|WDR7|23335|WD repeat domain 7##BC001156|TXNL1|9352|thioredoxin-like 1##AF003938|TXNL1|9352|thioredoxin-like 1##NM_004786|TXNL1|9352|thioredoxin-like 1##AB209263|TXNL1|9352|thioredoxin-like 1##DQ891846|TXNL1|9352|thioredoxin-like 1##DQ895034|TXNL1|9352|thioredoxin-like 1##EU176640|TXNL1|9352|thioredoxin-like 1##AF051896|TXNL1|9352|thioredoxin-like 1##AF052659|TXNL1|9352|thioredoxin-like 1##AK313653|TXNL1|9352|thioredoxin-like 1##BC050352|WDR7|23335|WD repeat domain 7##AK127964|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC021740|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC035018|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK301799|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	0.052407	
chr19	42633813	42633994	reg1025911.p2	4.283	+	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	-53537	+	TSC_hg19_v1_chr19_+_42580286 NM_022752	-53621	+	S40369 AJ249209 BC131717 NM_002088	-63965	-	M36718 X13809 BT007438 AB590941 TSC_hg19_v1_chr19_-_42636564 BC006101 M36653 NM_001207025 NM_001207026 NM_001247994 NM_002698 X53468	2688	-	TSC_hg19_v1_chr19_-_42721830 BC027930 NM_133328 AY125488 BC013372 AK307895 AK130203 AK075328	87936	-	TSC_hg19_v1_chr19_+_42724463 AK298895 AB075831 NM_133444	90561	+	AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574##NM_022752|ZNF574|64763|zinc finger protein 574##S40369|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##AJ249209|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##BC131717|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##NM_002088|GRIK5|2901|glutamate receptor, ionotropic, kainate 5##M36718|POU2F2|5452|POU class 2 homeobox 2##X13809|POU2F2|5452|POU class 2 homeobox 2##BT007438|POU2F2|5452|POU class 2 homeobox 2##BC006101|POU2F2|5452|POU class 2 homeobox 2##M36653|POU2F2|5452|POU class 2 homeobox 2##NM_001207025|POU2F2|5452|POU class 2 homeobox 2##NM_001207026|POU2F2|5452|POU class 2 homeobox 2##NM_001247994|POU2F2|5452|POU class 2 homeobox 2##NM_002698|POU2F2|5452|POU class 2 homeobox 2##X53468|POU2F2|5452|POU class 2 homeobox 2##BC027930|DEDD2|162989|death effector domain containing 2##NM_133328|DEDD2|162989|death effector domain containing 2##AY125488|DEDD2|162989|death effector domain containing 2##BC013372|DEDD2|162989|death effector domain containing 2##AK307895|DEDD2|162989|death effector domain containing 2##AK130203|DEDD2|162989|death effector domain containing 2##AK075328|DEDD2|162989|death effector domain containing 2##AK298895|ZNF526|116115|zinc finger protein 526##AB075831|ZNF526|116115|zinc finger protein 526##NM_133444|ZNF526|116115|zinc finger protein 526	0.0	
chr21	30720704	30720884	reg1017835.p1	4.283	+	AF026199 NM_206866	-49058	+	TSC_hg19_v1_chr21_+_30671242 AK313791 BC063307	-49553	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	-49574	+	L19058 NM_000830 NM_175611 AK296404 BC028238	591495	-	BC101503 BC101505 NM_012131 AY358094	818212	-	AB590283 CU676754 DQ892002 DQ895192 BC058004 AY358707 BC020866 AK223512 AK022269 NM_199328	867561	-	AF026199|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_206866|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AK313791|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC063307|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##L19058|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_000830|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##NM_175611|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##AK296404|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC028238|GRIK1|2897|glutamate receptor, ionotropic, kainate 1##BC101503|CLDN17|26285|claudin 17##BC101505|CLDN17|26285|claudin 17##NM_012131|CLDN17|26285|claudin 17##AY358094|CLDN17|26285|claudin 17##DQ892002|CLDN8|9073|claudin 8##DQ895192|CLDN8|9073|claudin 8##BC058004|CLDN8|9073|claudin 8##AY358707|CLDN8|9073|claudin 8##BC020866|CLDN8|9073|claudin 8##AK223512|CLDN8|9073|claudin 8##AK022269|CLDN8|9073|claudin 8##NM_199328|CLDN8|9073|claudin 8	0.0	
chr7	51255858	51256000	reg1029411.p1	4.283	+	TSC_hg19_v1_chr7_-_50861150 NM_001001555	-394775	-	D86962 TSC_hg19_v1_chr7_-_50860699	-395240	-	AF000017 AB000731 AF001534 NM_001001549 NM_005311 U34355	-455896	-	AB385366 TSC_hg19_v1_chr7_-_51384416 BC136441 BC144099	128451	-	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	128557	-	NM_182595	1847419	+	NM_001001555|GRB10|2887|growth factor receptor-bound protein 10##D86962|GRB10|2887|growth factor receptor-bound protein 10##AF000017|GRB10|2887|growth factor receptor-bound protein 10##AB000731|GRB10|2887|growth factor receptor-bound protein 10##AF001534|GRB10|2887|growth factor receptor-bound protein 10##NM_001001549|GRB10|2887|growth factor receptor-bound protein 10##NM_005311|GRB10|2887|growth factor receptor-bound protein 10##U34355|GRB10|2887|growth factor receptor-bound protein 10##BC136441|COBL|23242|cordon-bleu homolog (mouse)##BC144099|COBL|23242|cordon-bleu homolog (mouse)##BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12	0.033149	
chr8	27218260	27218371	reg1029298.p2	4.283	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-35238	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-35263	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-35298	+	AK314787 U62431 NM_000742	118456	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	130343	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	253890	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	0.0	
chr9	119666606	119666707	reg1029486.p2	4.283	+	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	-217050	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	-217194	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	-750586	+	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	510657	-	TSC_hg19_v1_chr9_-_120177336 BX649176	510678	-	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	799808	+	NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2##BX649176|ASTN2|23245|astrotactin 2##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4	0.0	
chr11	118662545	118662726	reg1029168.p2	4.282	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-701	-	TSC_hg19_v1_chr11_-_118661865 Z11685	-756	-	TSC_hg19_v1_chr11_-_118661860 BC026228	-776	-	AK291512 NM_001716 BC110352 X68149 AB464488	91925	+	NM_032966 X68829	101465	+	AB094091 NM_182557	118977	-	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like	0.0	
chr17	47634937	47635026	reg1032589.p1	4.282	+	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	-62293	+	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	-142733	-	BC095460 TSC_hg19_v1_chr17_-_47492215	-142766	-	TSC_hg19_v1_chr17_+_47653192 AL834282 NM_007225	18255	+	TSC_hg19_v1_chr17_+_47653475 BC022541 AK308928 AY358526 AB385434	18546	+	TSC_hg19_v1_chr17_-_47755471 BC003385 AK222589 AK312691 AJ000644 AK303268 AK316366 BC001269 AK293587 AK300616 NM_001007226 NM_001007227 NM_001007228 NM_001007229 NM_001007230 NM_003563	120451	-	AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##BC095460|PHB|5245|prohibitin##AL834282|NXPH3|11248|neurexophilin 3##NM_007225|NXPH3|11248|neurexophilin 3##BC022541|NXPH3|11248|neurexophilin 3##AK308928|NXPH3|11248|neurexophilin 3##AY358526|NXPH3|11248|neurexophilin 3##BC003385|SPOP|8405|speckle-type POZ protein##AK222589|SPOP|8405|speckle-type POZ protein##AK312691|SPOP|8405|speckle-type POZ protein##AJ000644|SPOP|8405|speckle-type POZ protein##AK303268|SPOP|8405|speckle-type POZ protein##AK316366|SPOP|8405|speckle-type POZ protein##BC001269|SPOP|8405|speckle-type POZ protein##AK293587|SPOP|8405|speckle-type POZ protein##AK300616|SPOP|8405|speckle-type POZ protein##NM_001007226|SPOP|8405|speckle-type POZ protein##NM_001007227|SPOP|8405|speckle-type POZ protein##NM_001007228|SPOP|8405|speckle-type POZ protein##NM_001007229|SPOP|8405|speckle-type POZ protein##NM_001007230|SPOP|8405|speckle-type POZ protein##NM_003563|SPOP|8405|speckle-type POZ protein	0.758785	CTCF.p2:-11:0.759
chr19	9420530	9420630	reg1035065.p2	4.282	+	BC109267 BC109268 NM_198535 EU446770	-4786	-	BC146920 NM_001079935	-58918	+	BC137147 BC137162 NM_001005191	-95034	-	NM_001202406 NM_001202407 NM_001202408 NM_001202409 NM_001202410 NM_001202411 NM_032497	13867	+	AK027700 AK308517 AK309952 AK310117 AK092348 AX747491 TSC_hg19_v1_chr19_+_9434880 AK056489 AK310020 AK310781 AK298169 NM_001172650 NM_001202412 BC006436 AL389938 BC034489	14355	+	NM_001202425 U37251	14805	+	BC109267|ZNF699|374879|zinc finger protein 699##BC109268|ZNF699|374879|zinc finger protein 699##NM_198535|ZNF699|374879|zinc finger protein 699##EU446770|ZNF266|10781|zinc finger protein 266##BC146920|OR7E24|26648|olfactory receptor, family 7, subfamily E, member 24##NM_001079935|OR7E24|26648|olfactory receptor, family 7, subfamily E, member 24##BC137147|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4##BC137162|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4##NM_001005191|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4##NM_001202406|ZNF559|84527|zinc finger protein 559##NM_001202407|ZNF559|84527|zinc finger protein 559##NM_001202408|ZNF559|84527|zinc finger protein 559##NM_001202409|ZNF559|84527|zinc finger protein 559##NM_001202410|ZNF559|84527|zinc finger protein 559##NM_001202411|ZNF559|84527|zinc finger protein 559##NM_032497|ZNF559|84527|zinc finger protein 559##AK027700|ZNF559|84527|zinc finger protein 559##AK308517|ZNF559|84527|zinc finger protein 559##AK309952|ZNF559|84527|zinc finger protein 559##AK310117|ZNF559|84527|zinc finger protein 559##AK092348|ZNF559|84527|zinc finger protein 559##AK056489|ZNF559|84527|zinc finger protein 559##AK310020|ZNF559|84527|zinc finger protein 559##AK310781|ZNF559|84527|zinc finger protein 559##AK298169|ZNF559|84527|zinc finger protein 559##NM_001172650|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough##NM_001202412|ZNF559|84527|zinc finger protein 559##BC006436|ZNF559|84527|zinc finger protein 559##AL389938|ZNF559|84527|zinc finger protein 559##BC034489|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough##NM_001202425|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough##U37251|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough	0.0	
chr2	11884115	11884250	reg1028138.p1	4.282	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-73891	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-201339	+	TSC_hg19_v1_chr2_+_11682798 BC071853	-201381	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	2593	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	973071	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	973734	+	AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.0	
chr21	46265977	46266124	reg1032064.p1	4.282	+	TSC_hg19_v1_chr21_-_46238041 BC008420 NM_006936	-27995	-	TSC_hg19_v1_chr21_-_46237978 AK300822	-28052	-	AK222591 AK312350 TSC_hg19_v1_chr21_-_46237975	-28076	-	AB528540 DQ891772 DQ894956 TSC_hg19_v1_chr21_-_46293552 AK094882	27496	-	TSC_hg19_v1_chr21_-_46293597 BC019295 AK290139 BC000415 BC020983 BC034250 AK293318 BC031097	27529	-	TSC_hg19_v1_chr21_-_46293607 BC012858 AK298557	27553	-	BC008420|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##NM_006936|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##AK300822|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##AK222591|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##AK312350|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##DQ891772|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##DQ894956|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AK094882|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##BC019295|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AK290139|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##BC000415|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##BC020983|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##BC034250|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##BC031097|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein	0.025654	
chr4	87929141	87929263	reg1030183.p1	4.282	+	TSC_hg19_v1_chr4_+_87928422 L13773 BC114930 NM_005935 AK296243 L25050 AB385236	-881	+	TSC_hg19_v1_chr4_+_87857481 L13743	-71719	+	TSC_hg19_v1_chr4_+_87856199 AK296149 NM_001166693 AK300364 BC017432 AK302199	-72987	+	TSC_hg19_v1_chr4_+_87968211 AF177238 AF177239	39049	+	BC041901 TSC_hg19_v1_chr4_-_88141661 BX640727 BX538173 NM_020803 CR749265 BX640744 BX647454 BC041384	212460	-	HQ258364 AY268355 BC112303 BC112305 AB073347 AK292784 AY186249 AY186250 NM_001136230 NM_178135 AY358575	314823	-	L13773|AFF1|4299|AF4/FMR2 family, member 1##BC114930|AFF1|4299|AF4/FMR2 family, member 1##NM_005935|AFF1|4299|AF4/FMR2 family, member 1##AK296243|AFF1|4299|AF4/FMR2 family, member 1##L25050|AFF1|4299|AF4/FMR2 family, member 1##AK296149|AFF1|4299|AF4/FMR2 family, member 1##NM_001166693|AFF1|4299|AF4/FMR2 family, member 1##AK300364|AFF1|4299|AF4/FMR2 family, member 1##BC017432|AFF1|4299|AF4/FMR2 family, member 1##AF177238|AFF1|4299|AF4/FMR2 family, member 1##AF177239|AFF1|4299|AF4/FMR2 family, member 1##BC041901|KLHL8|57563|kelch-like 8 (Drosophila)##BX640727|KLHL8|57563|kelch-like 8 (Drosophila)##BX538173|KLHL8|57563|kelch-like 8 (Drosophila)##NM_020803|KLHL8|57563|kelch-like 8 (Drosophila)##CR749265|KLHL8|57563|kelch-like 8 (Drosophila)##BX640744|KLHL8|57563|kelch-like 8 (Drosophila)##BX647454|KLHL8|57563|kelch-like 8 (Drosophila)##BC041384|KLHL8|57563|kelch-like 8 (Drosophila)##HQ258364|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY268355|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112303|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112305|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AB073347|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AK292784|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186249|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186250|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_001136230|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_178135|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY358575|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13	0.0	
chr8	28223214	28223394	reg1030615.p1	4.282	+	NM_006228 U48263 TSC_hg19_v1_chr8_+_28174784 AK289633 AY335948 BC034758	-48579	+	NM_018091 TSC_hg19_v1_chr8_+_27950679 AK302140 AK296475 AK022626 AK295574 AK001284 AK293424 AK315985 AK316053 AK298265 BC001240 AL834273 AB463602 AM392633	-272647	+	AB075870 NM_001010906	-281917	-	BC001237 TSC_hg19_v1_chr8_-_28243694	20338	-	AK002050 AK023418 NM_018660 AB057659 AB073627	20657	-	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	124475	-	NM_006228|PNOC|5368|prepronociceptin##U48263|PNOC|5368|prepronociceptin##AK289633|PNOC|5368|prepronociceptin##AY335948|PNOC|5368|prepronociceptin##BC034758|PNOC|5368|prepronociceptin##NM_018091|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK302140|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK296475|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK022626|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK295574|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK001284|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK293424|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK315985|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK316053|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK298265|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##BC001240|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AL834273|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AM392633|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AB075870|C8orf80|389643|chromosome 8 open reading frame 80##NM_001010906|C8orf80|389643|chromosome 8 open reading frame 80##BC001237|ZNF395|55893|zinc finger protein 395##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16	0.0	
chr8	95274563	95274674	reg1031623.p2	4.282	+	TSC_hg19_v1_chr8_-_95274548 AK314017 BC022010 NM_005261 NM_181702	-70	-	U10550 TSC_hg19_v1_chr8_-_95274525	-96	-	AK312873 NM_001144663	-45088	-	AF007866 NM_001205263	174537	-	BC001965 AF112481 BC020668 AK290437 TSC_hg19_v1_chr8_-_95487344 NM_001205262 NM_012415	212701	-	AB037850 AF116724 HQ258534 TSC_hg19_v1_chr8_-_95565696 AL832487 BC112288 BC113380 NM_015496 NM_183009	291089	-	AK314017|GEM|2669|GTP binding protein overexpressed in skeletal muscle##BC022010|GEM|2669|GTP binding protein overexpressed in skeletal muscle##NM_005261|GEM|2669|GTP binding protein overexpressed in skeletal muscle##NM_181702|GEM|2669|GTP binding protein overexpressed in skeletal muscle##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205262|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AB037850|KIAA1429|25962|KIAA1429##AF116724|KIAA1429|25962|KIAA1429##AL832487|KIAA1429|25962|KIAA1429##BC112288|KIAA1429|25962|KIAA1429##BC113380|KIAA1429|25962|KIAA1429##NM_015496|KIAA1429|25962|KIAA1429##NM_183009|KIAA1429|25962|KIAA1429	0.268869	CTCF.p2:13:0.269
chr1	151148577	151148659	reg1025000.p1	4.281	+	AF165217 AK313280 AK092700 AK300675 AX747678 BC017810 BX647346 AF177173 NM_013353	-133	-	NM_001204856 NM_024041 AK301644 TSC_hg19_v1_chr1_+_151138545 AK056322 BC000264 DQ892531 DQ895742	-10056	+	TSC_hg19_v1_chr1_-_151138337 BX647911 NM_212551 AK298706 NM_001136543	-10242	-	DQ892940 DQ896189 AB464341 BT019356 BT019357 AK222935 AK222939 TSC_hg19_v1_chr1_-_151162644 BC003151 D43642 NM_005997 AK225130 AK297565	14003	-	TSC_hg19_v1_chr1_-_151162674 AK310045 DQ655941	14055	-	TSC_hg19_v1_chr1_+_151171050 AK309826 NM_001135636 NM_001135637 NM_001135638 NM_003557 AK295691 BC007833 U78576 BC007005 U78577 U78575 AK291015	22415	+	AF165217|TMOD4|29765|tropomodulin 4 (muscle)##AK313280|TMOD4|29765|tropomodulin 4 (muscle)##AK092700|TMOD4|29765|tropomodulin 4 (muscle)##AK300675|TMOD4|29765|tropomodulin 4 (muscle)##BC017810|TMOD4|29765|tropomodulin 4 (muscle)##BX647346|TMOD4|29765|tropomodulin 4 (muscle)##AF177173|TMOD4|29765|tropomodulin 4 (muscle)##NM_013353|TMOD4|29765|tropomodulin 4 (muscle)##NM_001204856|SCNM1|79005|sodium channel modifier 1##NM_024041|SCNM1|79005|sodium channel modifier 1##AK301644|SCNM1|79005|sodium channel modifier 1##AK056322|SCNM1|79005|sodium channel modifier 1##BC000264|SCNM1|79005|sodium channel modifier 1##DQ892531|SCNM1|79005|sodium channel modifier 1##DQ895742|SCNM1|79005|sodium channel modifier 1##BX647911|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##NM_212551|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##AK298706|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##NM_001136543|LYSMD1|388695|LysM, putative peptidoglycan-binding, domain containing 1##DQ892940|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##DQ896189|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##BT019356|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##BT019357|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK222935|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK222939|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##BC003151|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##D43642|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##NM_005997|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK225130|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK297565|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK310045|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##DQ655941|VPS72|6944|vacuolar protein sorting 72 homolog (S. cerevisiae)##AK309826|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_001135636|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_001135637|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_001135638|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##NM_003557|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##AK295691|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##BC007833|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##U78576|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##U78577|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##U78575|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha##AK291015|PIP5K1A|8394|phosphatidylinositol-4-phosphate 5-kinase, type I, alpha	0.0	
chr13	99848969	99849092	reg1008950.p2	4.281	+	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	-110339	-	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	-218740	-	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	-444125	-	AK290342 NM_001144072	3648	+	TSC_hg19_v1_chr13_-_99852951 BC043515 AK097488	3937	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	4089	+	BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9##AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AK290342|UBAC2|337867|UBA domain containing 2##NM_001144072|UBAC2|337867|UBA domain containing 2##BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2	0.0	
chr1	45118870	45118955	reg1001719.p2	4.281	+	TSC_hg19_v1_chr1_+_45097700 AK296038 AK225180	-21150	+	AK056424 TSC_hg19_v1_chr1_+_44870926 BC034221 NM_018150	-247970	+	TSC_hg19_v1_chr1_-_44820942 AK026596	-297951	-	CR457348 AK026006 AK225405 TSC_hg19_v1_chr1_-_45140099 BC064520 NM_024587 AL832539	21175	-	AK296548 TSC_hg19_v1_chr1_-_45140143 BC007521	21236	-	BC026115 NM_001145636	21481	+	AK296038|RNF220|55182|ring finger protein 220##AK225180|RNF220|55182|ring finger protein 220##AK056424|RNF220|55182|ring finger protein 220##BC034221|RNF220|55182|ring finger protein 220##NM_018150|RNF220|55182|ring finger protein 220##AK026596|ERI3|79033|ERI1 exoribonuclease family member 3##CR457348|TMEM53|79639|transmembrane protein 53##AK026006|TMEM53|79639|transmembrane protein 53##AK225405|TMEM53|79639|transmembrane protein 53##BC064520|TMEM53|79639|transmembrane protein 53##NM_024587|TMEM53|79639|transmembrane protein 53##AL832539|TMEM53|79639|transmembrane protein 53##AK296548|TMEM53|79639|transmembrane protein 53##BC007521|TMEM53|79639|transmembrane protein 53##BC026115|C1orf228|339541|chromosome 1 open reading frame 228##NM_001145636|C1orf228|339541|chromosome 1 open reading frame 228	0.0	
chr16	11347953	11348133	reg1011294.p2	4.281	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-309600	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-311808	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-311877	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	2007	-	X63758 BC096135 BC096136 BC096137 NM_005425	15095	-	NM_021247	19408	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr19	14248276	14248402	reg1018591.p3	4.281	+	TSC_hg19_v1_chr19_+_14247979 BX537706	-348	+	AK302134 TSC_hg19_v1_chr19_-_14247402 BC036521 AK001466 NM_018154	-917	-	AB104486 AB463417 CR457235 GQ129346 GQ129347 AF279307 BC007726 BC010014 BC002518 TSC_hg19_v1_chr19_-_14247395 AK223080 AK001288	-1007	-	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	12461	-	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	68709	-	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	243710	+	BX537706|LOC100507373|100507373|uncharacterized LOC100507373##AK302134|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC036521|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK001466|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##NM_018154|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AB104486|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##CR457235|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##GQ129346|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##GQ129347|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AF279307|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC007726|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC010014|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK223080|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK001288|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule	0.251573	CTCF.p2:-34:0.252
chr21	37522904	37522971	reg1031711.p2	4.281	+	AB041012 NM_001236 AB124847 TSC_hg19_v1_chr21_+_37507383 AK223429 BC002812 AB004854 CR541709	-15588	+	TSC_hg19_v1_chr21_+_37442321 AK294142 J04056 AK308691 AK311219 BC015640 AK314879 BC002511 DQ892353 DQ895559 BT019843 CR541708	-80582	+	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	-80684	+	TSC_hg19_v1_chr21_-_37528616 AB004851 BC037580 BC047014	5694	-	AJ237839 NM_005128	13901	+	TSC_hg19_v1_chr21_+_37692548 BC058002 NM_015358 AK295133 BC007311 D50926 BC094779 BC132731 BC144116 AK292957 AB489143	169582	+	AB041012|CBR3|874|carbonyl reductase 3##NM_001236|CBR3|874|carbonyl reductase 3##AB124847|CBR3|874|carbonyl reductase 3##AK223429|CBR3|874|carbonyl reductase 3##BC002812|CBR3|874|carbonyl reductase 3##AB004854|CBR3|874|carbonyl reductase 3##CR541709|CBR3|874|carbonyl reductase 3##AK294142|CBR1|873|carbonyl reductase 1##J04056|CBR1|873|carbonyl reductase 1##AK308691|CBR1|873|carbonyl reductase 1##AK311219|CBR1|873|carbonyl reductase 1##BC015640|CBR1|873|carbonyl reductase 1##AK314879|CBR1|873|carbonyl reductase 1##BC002511|CBR1|873|carbonyl reductase 1##DQ892353|CBR1|873|carbonyl reductase 1##DQ895559|CBR1|873|carbonyl reductase 1##BT019843|CBR1|873|carbonyl reductase 1##CR541708|CBR1|873|carbonyl reductase 1##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1##AB004851|LOC100506428|100506428|uncharacterized LOC100506428##BC037580|LOC100506428|100506428|uncharacterized LOC100506428##BC047014|LOC100506428|100506428|uncharacterized LOC100506428##AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2##BC058002|MORC3|23515|MORC family CW-type zinc finger 3##NM_015358|MORC3|23515|MORC family CW-type zinc finger 3##AK295133|MORC3|23515|MORC family CW-type zinc finger 3##BC007311|MORC3|23515|MORC family CW-type zinc finger 3##D50926|MORC3|23515|MORC family CW-type zinc finger 3##BC094779|MORC3|23515|MORC family CW-type zinc finger 3##BC132731|MORC3|23515|MORC family CW-type zinc finger 3##BC144116|MORC3|23515|MORC family CW-type zinc finger 3##AK292957|MORC3|23515|MORC family CW-type zinc finger 3	0.0	
chr5	124257152	124257302	reg1030622.p2	4.281	+	BC131507 AB033107 BC151226 NM_020747	-176439	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1409345	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1498083	-	NM_001146319 AK316288 AK300154	1438587	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1501616	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	1501960	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.0	
chr7	1064093	1064254	reg1031971.p2	4.281	+	TSC_hg19_v1_chr7_+_1022978 AK000366	-41204	+	TSC_hg19_v1_chr7_+_1022816 BC025761 NM_017781	-41355	+	BC042434 BC053372 TSC_hg19_v1_chr7_-_1015171 BC058158 AK023185 BC110420 BC070383 AK290517 AY957566 BC103632 NM_001031617	-48984	-	TSC_hg19_v1_chr7_-_1067984 L07392 BC025971	3784	-	BC014241 NM_138445 AB464540 DQ892659 DQ895899	32971	+	NM_001039966 NM_001505 AF015257	62303	+	AK000366|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##BC025761|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##NM_017781|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##BC042434|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC053372|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC058158|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK023185|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC110420|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC070383|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK290517|ADAP1|11033|ArfGAP with dual PH domains 1##AY957566|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC103632|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_001031617|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC025971|C7orf50|84310|chromosome 7 open reading frame 50##BC014241|GPR146|115330|G protein-coupled receptor 146##NM_138445|GPR146|115330|G protein-coupled receptor 146##DQ892659|GPR146|115330|G protein-coupled receptor 146##DQ895899|GPR146|115330|G protein-coupled receptor 146##NM_001039966|GPER|2852|G protein-coupled estrogen receptor 1##NM_001505|GPER|2852|G protein-coupled estrogen receptor 1##AF015257|GPER|2852|G protein-coupled estrogen receptor 1	0.0	
chr7	47709207	47709368	reg1032148.p1	4.281	+	AK126096 NM_001123065	-14446	+	TSC_hg19_v1_chr7_-_47622186 AB208995	-87101	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	-87504	-	AK024728 NM_025031 BC113679 BC113681 AK092057 AX747337	125651	+	AB061683 NM_138295	278766	-	BT019481 BT019482 CR536552 Y16893 AB463759 BC007013 TSC_hg19_v1_chr7_-_48019149 AK294117 AK290459 AF076844 AF110393	309865	-	AK126096|C7orf65|401335|chromosome 7 open reading frame 65##NM_001123065|C7orf65|401335|chromosome 7 open reading frame 65##AB208995|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3##AK024728|C7orf69|80099|chromosome 7 open reading frame 69##NM_025031|C7orf69|80099|chromosome 7 open reading frame 69##BC113679|C7orf69|80099|chromosome 7 open reading frame 69##BC113681|C7orf69|80099|chromosome 7 open reading frame 69##AK092057|PKD1L1|168507|polycystic kidney disease 1 like 1##AB061683|PKD1L1|168507|polycystic kidney disease 1 like 1##NM_138295|PKD1L1|168507|polycystic kidney disease 1 like 1##BT019481|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BT019482|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##CR536552|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##Y16893|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BC007013|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK294117|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK290459|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF076844|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF110393|HUS1|3364|HUS1 checkpoint homolog (S. pombe)	0.0	
chr7	8169061	8169166	reg1032161.p2	4.281	+	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	-160680	+	BC009868 NM_002947	-410876	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-488740	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	132603	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	132678	-	TSC_hg19_v1_chr7_-_8302174 U38260 L01100 BC008640 BC005922 NM_004968	133060	-	NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa##U38260|ICA1|3382|islet cell autoantigen 1, 69kDa##L01100|ICA1|3382|islet cell autoantigen 1, 69kDa##BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa##BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr8	81807758	81807865	reg1031166.p1	4.281	+	AK131274 NM_001033723	-20796	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-409327	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-724041	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	216503	-	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	384962	+	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	551858	-	AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2	0.073025	
chr10	24608519	24608616	reg1030421.p2	4.280	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	-110473	+	AK091142 AX746804 NM_001098501 NM_019590 TSC_hg19_v1_chr10_+_24497850	-110779	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	-624890	+	TSC_hg19_v1_chr10_+_24755441 AK300422	146877	+	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	146902	+	AK307604 TSC_hg19_v1_chr10_-_25012174	403606	-	AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK091142|KIAA1217|56243|KIAA1217##NM_001098501|KIAA1217|56243|KIAA1217##NM_019590|KIAA1217|56243|KIAA1217##AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217##BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21	0.560729	CTCF.p2:4:0.561
chr1	91906574	91906689	reg1030771.p1	4.280	+	TSC_hg19_v1_chr1_-_91870367 AB058637 AK294754 AK302582 AB058636 AB204867 NM_001017975	-36259	-	BC150177 TSC_hg19_v1_chr1_-_91487794 NM_032186 NM_201269	-418841	-	TSC_hg19_v1_chr1_-_91487593 BC110841 BC132776 BC132778	-418996	-	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	59788	+	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	60050	+	AK291345 BC126116 BC136295 BC143869 TSC_hg19_v1_chr1_-_92351559	444886	-	AB058637|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK294754|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK302582|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB058636|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB204867|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001017975|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##BC150177|ZNF644|84146|zinc finger protein 644##NM_032186|ZNF644|84146|zinc finger protein 644##NM_201269|ZNF644|84146|zinc finger protein 644##BC110841|ZNF644|84146|zinc finger protein 644##BC132776|ZNF644|84146|zinc finger protein 644##BC132778|ZNF644|84146|zinc finger protein 644##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK291345|TGFBR3|7049|transforming growth factor, beta receptor III##BC126116|TGFBR3|7049|transforming growth factor, beta receptor III##BC136295|TGFBR3|7049|transforming growth factor, beta receptor III##BC143869|TGFBR3|7049|transforming growth factor, beta receptor III	0.145342	
chr2	188847559	188847665	reg1030646.p1	4.280	+	TSC_hg19_v1_chr2_-_188419185 NM_001032281 NM_006287	-428411	-	J03225 AF021834 TSC_hg19_v1_chr2_-_188419163 AK313562 BC015514 BC014332	-428502	-	DQ280491 U17473 L76380 AK291630 AK292998 DQ280490 NM_005795	-534666	-	AK055718 NM_001252668 NM_001252669 NM_016315 TSC_hg19_v1_chr2_+_189156445	308813	+	AK314498 TSC_hg19_v1_chr2_+_189156621	309004	+	TSC_hg19_v1_chr2_+_189156656 BC001103	309050	+	NM_001032281|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##NM_006287|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##J03225|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AF021834|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##AK313562|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC015514|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##BC014332|TFPI|7035|tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor)##DQ280491|CALCRL|10203|calcitonin receptor-like##U17473|CALCRL|10203|calcitonin receptor-like##L76380|CALCRL|10203|calcitonin receptor-like##AK291630|CALCRL|10203|calcitonin receptor-like##AK292998|CALCRL|10203|calcitonin receptor-like##NM_005795|CALCRL|10203|calcitonin receptor-like##AK055718|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252668|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_001252669|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##NM_016315|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AK314498|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##BC001103|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1	0.0	
chr3	172309941	172310121	reg1032983.p1	4.280	+	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	-68853	-	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	-143808	-	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-551694	+	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	118859	-	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	158493	+	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	162271	+	AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene	0.0	
chr6_mann_hap4	4279048	4279160	reg1032266.p1	4.280	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.08447	
chr8	133064263	133064358	reg1029621.p2	4.280	+	BX648595 TSC_hg19_v1_chr8_+_132991247	-73101	+	TSC_hg19_v1_chr8_+_132916408 AB385283	-147832	+	AK307433 TSC_hg19_v1_chr8_+_132916394	-147920	+	AK297911 NM_001080399	7316	-	NM_001145095	53201	-	AK296293 NM_001204824	395198	-	BX648595|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##AK307433|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##AK297911|OC90|729330|otoconin 90##NM_001080399|OC90|729330|otoconin 90##NM_001145095|HHLA1|10086|HERV-H LTR-associating 1##AK296293|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##NM_001204824|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3	0.055067	
chr1	42277262	42277404	reg1014526.p1	4.279	+	BC034393 X55177 M65199 NM_001956	-327014	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-569497	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-569548	-	TSC_hg19_v1_chr1_-_42384357 BC040942	107009	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	107040	-	TSC_hg19_v1_chr1_-_42501606 BC046120	224296	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.123839	
chr15	77789410	77789590	reg1001608.p2	4.279	+	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-76238	+	TSC_hg19_v1_chr15_+_77713043 AK297449 AK311376	-76469	+	TSC_hg19_v1_chr15_-_77712437 NM_024776	-76957	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	135199	-	TSC_hg19_v1_chr15_-_77924732 AK291363	135280	-	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	580453	-	AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AK297449|HMG20A|10363|high mobility group 20A##NM_024776|PEAK1|79834|NKF3 kinase family member##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B	0.0	
chr7	73631818	73631960	reg1022115.p1	4.279	+	TSC_hg19_v1_chr7_+_73624361 AF252613	-7535	+	TSC_hg19_v1_chr7_+_73624338 AF161531 AF252611 AF252612 AF252614 AK225150 AK290074 AK290916	-7553	+	TSC_hg19_v1_chr7_+_73624283 BC001609 AK002099 BC006080	-7607	+	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	36822	-	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	36847	-	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	71898	+	AF252613|LAT2|7462|linker for activation of T cells family, member 2##AF161531|LAT2|7462|linker for activation of T cells family, member 2##AF252611|LAT2|7462|linker for activation of T cells family, member 2##AF252612|LAT2|7462|linker for activation of T cells family, member 2##AF252614|LAT2|7462|linker for activation of T cells family, member 2##AK225150|LAT2|7462|linker for activation of T cells family, member 2##AK290074|LAT2|7462|linker for activation of T cells family, member 2##AK290916|LAT2|7462|linker for activation of T cells family, member 2##BC001609|LAT2|7462|linker for activation of T cells family, member 2##AK002099|LAT2|7462|linker for activation of T cells family, member 2##BC006080|LAT2|7462|linker for activation of T cells family, member 2##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2	0.0	
chr10	31380019	31380199	reg1023014.p2	4.278	+	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	-59288	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	-91657	-	AF139543 BC066294 NM_183058	-461474	-	TSC_hg19_v1_chr10_+_31607451 BX647794	227327	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	227848	-	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	228024	+	BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1	0.0	
chr12	127358815	127358996	reg1001011.p1	4.278	+	NM_052907	-1547744	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-1808837	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-1808964	+	NM_001136103	1393042	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	1949538	-	BC043528 TSC_hg19_v1_chr12_+_129337985	1979079	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.039833	
chr22	36779330	36779511	reg1030905.p1	4.278	+	D11393 TSC_hg19_v1_chr22_-_36697021	-82406	-	BC011915 TSC_hg19_v1_chr22_-_36681760	-97657	-	TSC_hg19_v1_chr22_+_36649178 AF305224 AK303919 AK313752 AK298053 BC113867 BC114475 BC127186 BC143038 BC143039 BC017331 AK296099	-130231	+	TSC_hg19_v1_chr22_-_36783906 AB290175 CR456526	4466	-	TSC_hg19_v1_chr22_-_36783943 M81105	4532	-	AK131080 TSC_hg19_v1_chr22_-_36783982 BC049849	4559	-	D11393|MYH9|4627|myosin, heavy chain 9, non-muscle##BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle##AF305224|APOL1|8542|apolipoprotein L, 1##AK303919|APOL1|8542|apolipoprotein L, 1##AK313752|APOL1|8542|apolipoprotein L, 1##AK298053|APOL1|8542|apolipoprotein L, 1##BC113867|APOL1|8542|apolipoprotein L, 1##BC114475|APOL1|8542|apolipoprotein L, 1##BC127186|APOL1|8542|apolipoprotein L, 1##BC143038|APOL1|8542|apolipoprotein L, 1##BC143039|APOL1|8542|apolipoprotein L, 1##BC017331|APOL1|8542|apolipoprotein L, 1##AK296099|APOL1|8542|apolipoprotein L, 1##AB290175|MYH9|4627|myosin, heavy chain 9, non-muscle##CR456526|MYH9|4627|myosin, heavy chain 9, non-muscle##M81105|MYH9|4627|myosin, heavy chain 9, non-muscle##AK131080|MYH9|4627|myosin, heavy chain 9, non-muscle##BC049849|MYH9|4627|myosin, heavy chain 9, non-muscle	0.0	
chr9	100745558	100745637	reg1027767.p2	4.278	+	TSC_hg19_v1_chr9_+_100745521 NM_006401	-92	+	AF228713 AF322875 BC048324 AK292441 NM_018437	-38480	-	AF306683 AF306682 AL833094 AY255672 NM_197978 AY244805	-45076	-	TSC_hg19_v1_chr9_+_100745633 AK223454 AK313733 U70439	16	+	TSC_hg19_v1_chr9_+_100745652 BC019658 Y07570 BC013003	55	+	TSC_hg19_v1_chr9_+_100745672 Y07569	130	+	NM_006401|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##AF228713|HEMGN|55363|hemogen##AF322875|HEMGN|55363|hemogen##BC048324|HEMGN|55363|hemogen##AK292441|HEMGN|55363|hemogen##NM_018437|HEMGN|55363|hemogen##AF306683|HEMGN|55363|hemogen##AF306682|HEMGN|55363|hemogen##AL833094|HEMGN|55363|hemogen##AY255672|HEMGN|55363|hemogen##NM_197978|HEMGN|55363|hemogen##AY244805|HEMGN|55363|hemogen##AK223454|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##AK313733|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##U70439|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##BC019658|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##Y07570|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##BC013003|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B##Y07569|ANP32B|10541|acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	0.0	
chr9	132793373	132793499	reg1029824.p1	4.278	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-195671	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-195714	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-195752	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	11918	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	12052	-	BC039728 NM_001136557 NM_001136558 NM_020960	22548	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr1	156736947	156737084	reg1031283.p2	4.277	+	NM_001126051 AK096411 AK304468 NM_001126050	-14884	-	TSC_hg19_v1_chr1_-_156721527 D16431 NM_004494	-15482	-	TSC_hg19_v1_chr1_-_156721375 AK298342 AK315514 BC018991	-15674	-	NM_005973 TSC_hg19_v1_chr1_+_156737306	277	+	TSC_hg19_v1_chr1_+_156737326 AK289872 BC010450 BC004913 X97124	332	+	AK126428 NM_001007792	48490	+	NM_001126051|HDGF|3068|hepatoma-derived growth factor##AK096411|HDGF|3068|hepatoma-derived growth factor##AK304468|HDGF|3068|hepatoma-derived growth factor##NM_001126050|HDGF|3068|hepatoma-derived growth factor##D16431|HDGF|3068|hepatoma-derived growth factor##NM_004494|HDGF|3068|hepatoma-derived growth factor##AK298342|HDGF|3068|hepatoma-derived growth factor##AK315514|HDGF|3068|hepatoma-derived growth factor##BC018991|HDGF|3068|hepatoma-derived growth factor##NM_005973|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##AK289872|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##BC010450|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##BC004913|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##X97124|PRCC|5546|papillary renal cell carcinoma (translocation-associated)##AK126428|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001007792|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1	0.0	
chr15	59397024	59397119	reg1034654.p1	4.277	+	TSC_hg19_v1_chr15_+_59359061 AK095327	-37993	+	BX647259 TSC_hg19_v1_chr15_+_59280332 AK131304	-116792	+	TSC_hg19_v1_chr15_+_59279864 BC060862 BX538130 NM_017610	-117214	+	TSC_hg19_v1_chr15_+_59397344 NM_004701 AK001404 AL080146 BC105086 BC105112 AF087910 AK222611 AB020981 AF002822 AB587333 AM393577 BT019458 CR533527	300	+	AY642121 BC022034 AY009108 NM_033195 AK312777 AK058192	101981	+	AB290177 TSC_hg19_v1_chr15_-_59665055	267983	-	AK095327|RNF111|54778|ring finger protein 111##BX647259|RNF111|54778|ring finger protein 111##AK131304|RNF111|54778|ring finger protein 111##BC060862|RNF111|54778|ring finger protein 111##BX538130|RNF111|54778|ring finger protein 111##NM_017610|RNF111|54778|ring finger protein 111##NM_004701|CCNB2|9133|cyclin B2##AK001404|CCNB2|9133|cyclin B2##AL080146|CCNB2|9133|cyclin B2##BC105086|CCNB2|9133|cyclin B2##BC105112|CCNB2|9133|cyclin B2##AF087910|CCNB2|9133|cyclin B2##AK222611|CCNB2|9133|cyclin B2##AB020981|CCNB2|9133|cyclin B2##AF002822|CCNB2|9133|cyclin B2##AM393577|CCNB2|9133|cyclin B2##BT019458|CCNB2|9133|cyclin B2##CR533527|CCNB2|9133|cyclin B2##AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B##BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AB290177|MYO1E|4643|myosin IE	0.0	
chr16	80661161	80661315	reg1034287.p2	4.277	+	AF125108 NM_130897 BC054892 BC035232	-86350	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-1026623	-	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-2527783	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	176809	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	378846	+	TSC_hg19_v1_chr16_+_81040132 BC007334	378905	+	AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N##BC007334|CENPN|55839|centromere protein N	0.0	
chr17	62023971	62024101	reg1001599.p1	4.277	+	S52229 S79249 X83539 M80461 BC032651 BC002975 BC030210 AX775815 AX775817 AK222954 AK313583 AK223210 NM_000626 NM_001039933 NM_021602 M89957	-14370	-	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	-27870	-	BC119747 BC029365 NM_001318 NM_022579 NM_022580 NM_022581 AX772828	-35379	-	AY212253 M81758 NM_000334	26202	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	51726	+	NM_000873 TSC_hg19_v1_chr17_-_62084314	60269	-	S52229|CD79B|974|CD79b molecule, immunoglobulin-associated beta##S79249|CD79B|974|CD79b molecule, immunoglobulin-associated beta##X83539|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M80461|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC032651|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC002975|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC030210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775815|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775817|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK222954|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK313583|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK223210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_000626|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_001039933|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_021602|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M89957|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1##BC119747|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BC029365|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_001318|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022579|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022580|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022581|CSHL1|1444|chorionic somatomammotropin hormone-like 1##AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##NM_000873|ICAM2|3384|intercellular adhesion molecule 2	0.0	
chr19	18291848	18292015	reg1027162.p1	4.277	+	TSC_hg19_v1_chr19_+_18284633 AB590284 CU676848 CU689078 DQ884410 DQ892016 DQ895206	-7290	+	TSC_hg19_v1_chr19_+_18284622 BC021136 BC031020 AF097362	-7310	+	NM_006332 TSC_hg19_v1_chr19_+_18284600 AB049659 AK291551	-7340	+	TSC_hg19_v1_chr19_+_18304077 NM_032683 BC093008 BC005064 BC028146 AF320622 AF416712 AK094091	12104	+	M28210 TSC_hg19_v1_chr19_-_18314858 AF254795 BC011782 AK293467 AK289559 NM_002866	22873	-	NM_001098819 U88712	43371	-	DQ884410|IFI30|10437|interferon, gamma-inducible protein 30##DQ892016|IFI30|10437|interferon, gamma-inducible protein 30##DQ895206|IFI30|10437|interferon, gamma-inducible protein 30##BC021136|IFI30|10437|interferon, gamma-inducible protein 30##BC031020|IFI30|10437|interferon, gamma-inducible protein 30##NM_006332|IFI30|10437|interferon, gamma-inducible protein 30##AB049659|IFI30|10437|interferon, gamma-inducible protein 30##AK291551|IFI30|10437|interferon, gamma-inducible protein 30##NM_032683|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC093008|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC005064|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC028146|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AF320622|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AF416712|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AK094091|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##M28210|RAB3A|5864|RAB3A, member RAS oncogene family##AF254795|RAB3A|5864|RAB3A, member RAS oncogene family##BC011782|RAB3A|5864|RAB3A, member RAS oncogene family##AK293467|RAB3A|5864|RAB3A, member RAS oncogene family##AK289559|RAB3A|5864|RAB3A, member RAS oncogene family##NM_002866|RAB3A|5864|RAB3A, member RAS oncogene family##NM_001098819|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U88712|PDE4C|5143|phosphodiesterase 4C, cAMP-specific	0.154489	
chr3	169531641	169531740	reg1027974.p1	4.277	+	AK293661 AK095125 NM_001172779 NM_001172780 NM_153353 TSC_hg19_v1_chr3_-_169530693	-1118	-	TSC_hg19_v1_chr3_-_169530306 BC032841 AK295065 BC028610 AK302466	-1370	-	AB079777 AB079778 NM_001185119 AB528460 DQ891596 DQ894790 AY515692 AY541761 AY515691	-39520	+	NM_001080460	8019	+	HQ258307 BC117401 BC143569 BC143582 AY358138 AK097338 NM_024727 AK026912	55967	-	BX648991 BX648534 BX648989 BX537903 NM_182610	97730	+	AK293661|LRRC34|151827|leucine rich repeat containing 34##AK095125|LRRC34|151827|leucine rich repeat containing 34##NM_001172779|LRRC34|151827|leucine rich repeat containing 34##NM_001172780|LRRC34|151827|leucine rich repeat containing 34##NM_153353|LRRC34|151827|leucine rich repeat containing 34##BC032841|LRRC34|151827|leucine rich repeat containing 34##AK295065|LRRC34|151827|leucine rich repeat containing 34##BC028610|LRRC34|151827|leucine rich repeat containing 34##AK302466|LRRC34|151827|leucine rich repeat containing 34##AB079777|MYNN|55892|myoneurin##AB079778|MYNN|55892|myoneurin##NM_001185119|MYNN|55892|myoneurin##AB528460|MYNN|55892|myoneurin##DQ891596|MYNN|55892|myoneurin##DQ894790|MYNN|55892|myoneurin##AY515692|MYNN|55892|myoneurin##AY541761|MYNN|55892|myoneurin##AY515691|MYNN|55892|myoneurin##NM_001080460|LRRIQ4|344657|leucine-rich repeats and IQ motif containing 4##HQ258307|LRRC31|79782|leucine rich repeat containing 31##BC117401|LRRC31|79782|leucine rich repeat containing 31##BC143569|LRRC31|79782|leucine rich repeat containing 31##BC143582|LRRC31|79782|leucine rich repeat containing 31##AY358138|LRRC31|79782|leucine rich repeat containing 31##AK097338|LRRC31|79782|leucine rich repeat containing 31##NM_024727|LRRC31|79782|leucine rich repeat containing 31##AK026912|LRRC31|79782|leucine rich repeat containing 31##BX648991|SAMD7|344658|sterile alpha motif domain containing 7##BX648534|SAMD7|344658|sterile alpha motif domain containing 7##BX648989|SAMD7|344658|sterile alpha motif domain containing 7##BX537903|SAMD7|344658|sterile alpha motif domain containing 7##NM_182610|SAMD7|344658|sterile alpha motif domain containing 7	0.023293	
chr7	36834373	36834479	reg1030548.p1	4.277	+	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-70350	-	BC028678 NM_001100425	-404712	-	TSC_hg19_v1_chr7_+_36429470 BC070066 NM_018685 AK299803 AK291254 AF273437	-404986	+	BC064635 NM_001039459	190264	-	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	191294	-	AK291784 NM_001206482	558845	-	M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC028678|KIAA0895|23366|KIAA0895##NM_001100425|KIAA0895|23366|KIAA0895##BC070066|ANLN|54443|anillin, actin binding protein##NM_018685|ANLN|54443|anillin, actin binding protein##AK299803|ANLN|54443|anillin, actin binding protein##AK291254|ANLN|54443|anillin, actin binding protein##AF273437|ANLN|54443|anillin, actin binding protein##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1	0.99756	CTCF.p2:37:0.998
chr7	41922356	41922534	reg1027338.p1	4.277	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-179760	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1747836	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1747914	+	NM_000168	354172	-	TSC_hg19_v1_chr7_-_42276797 AK308429	354350	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	1029144	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.0	
chr1	105311215	105311387	reg1033217.p1	4.276	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-1018799	+	NM_001008221 AK292341	-1019023	+	AK292341 NM_001008221	-1072230	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	2288064	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	2371441	+	AB023193 TSC_hg19_v1_chr1_+_107683657	2372303	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.0	
chr16	66958834	66958968	reg1035686.p1	4.276	+	AF016272 AK225544 AK298255 AK225552 AK298334 AK313101 AK075243 AY358911 NM_001204744 NM_001204745 NM_001204746 NM_004062	-6094	-	TSC_hg19_v1_chr16_+_66914417 AK292539 NM_020786 AB037769 BC028030	-44457	+	AY075020 NM_001014435	-80061	+	L24564 BC011645 AK290613 BC057815 NM_001128850 NM_004165	527	-	TSC_hg19_v1_chr16_-_66968283 BC001733 BC005023 AF161467 AF151886 NM_016062	9400	-	TSC_hg19_v1_chr16_+_66968351 BX538086 NM_003869 NM_198061	9437	+	AF016272|CDH16|1014|cadherin 16, KSP-cadherin##AK225544|CDH16|1014|cadherin 16, KSP-cadherin##AK298255|CDH16|1014|cadherin 16, KSP-cadherin##AK225552|CDH16|1014|cadherin 16, KSP-cadherin##AK298334|CDH16|1014|cadherin 16, KSP-cadherin##AK313101|CDH16|1014|cadherin 16, KSP-cadherin##AK075243|CDH16|1014|cadherin 16, KSP-cadherin##AY358911|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204744|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204745|CDH16|1014|cadherin 16, KSP-cadherin##NM_001204746|CDH16|1014|cadherin 16, KSP-cadherin##NM_004062|CDH16|1014|cadherin 16, KSP-cadherin##AK292539|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##NM_020786|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##AB037769|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##BC028030|PDP2|57546|pyruvate dehyrogenase phosphatase catalytic subunit 2##AY075020|CA7|766|carbonic anhydrase VII##NM_001014435|CA7|766|carbonic anhydrase VII##L24564|RRAD|6236|Ras-related associated with diabetes##BC011645|RRAD|6236|Ras-related associated with diabetes##AK290613|RRAD|6236|Ras-related associated with diabetes##BC057815|RRAD|6236|Ras-related associated with diabetes##NM_001128850|RRAD|6236|Ras-related associated with diabetes##NM_004165|RRAD|6236|Ras-related associated with diabetes##BC001733|FAM96B|51647|family with sequence similarity 96, member B##BC005023|FAM96B|51647|family with sequence similarity 96, member B##AF161467|FAM96B|51647|family with sequence similarity 96, member B##AF151886|FAM96B|51647|family with sequence similarity 96, member B##NM_016062|FAM96B|51647|family with sequence similarity 96, member B##BX538086|CES2|8824|carboxylesterase 2##NM_003869|CES2|8824|carboxylesterase 2##NM_198061|CES2|8824|carboxylesterase 2	0.578994	CTCF.p2:39:0.516
chr20	40820307	40820435	reg1027364.p2	4.276	+	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-573310	-	AB089149 NM_052846	-824874	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	-850856	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	998139	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	1266121	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	1266232	+	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3##AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6	0.961675	CTCF.p2:-24:0.962
chr21	45579933	45580019	reg1023968.p2	4.276	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-26415	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-26471	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-52677	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	80790	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	80881	-	AF194032 NM_013369 NM_175867	102122	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.101594	
chr3	194980518	194980699	reg1015072.p1	4.276	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-573105	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-573985	+	NM_018385	-587403	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	11242	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	183094	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	289505	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.0	
chr3	86229982	86230076	reg1031989.p2	4.276	+	AF538973 NM_153184	-454398	+	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	-1221900	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-4194727	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	810222	-	BC094780 TSC_hg19_v1_chr3_-_87040272	810241	-	TSC_hg19_v1_chr3_+_87276461 NM_001244644 NM_014043 AK296072 AK002180 AL080122 AK002165 AK316585 AK222654 AF151842 BC001553 EU832121 EU832215 AB590670 CR533456	1046506	+	AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)##NM_001244644|CHMP2B|25978|charged multivesicular body protein 2B##NM_014043|CHMP2B|25978|charged multivesicular body protein 2B##AK296072|CHMP2B|25978|charged multivesicular body protein 2B##AK002180|CHMP2B|25978|charged multivesicular body protein 2B##AL080122|CHMP2B|25978|charged multivesicular body protein 2B##AK002165|CHMP2B|25978|charged multivesicular body protein 2B##AK316585|CHMP2B|25978|charged multivesicular body protein 2B##AK222654|CHMP2B|25978|charged multivesicular body protein 2B##AF151842|CHMP2B|25978|charged multivesicular body protein 2B##BC001553|CHMP2B|25978|charged multivesicular body protein 2B##EU832121|CHMP2B|25978|charged multivesicular body protein 2B##EU832215|CHMP2B|25978|charged multivesicular body protein 2B##CR533456|CHMP2B|25978|charged multivesicular body protein 2B	0.0	
chr4	152020298	152020425	reg1021655.p1	4.276	+	TSC_hg19_v1_chr4_-_151936880 AK098039	-83471	-	AF216648 NM_006726	-83713	-	TSC_hg19_v1_chr4_-_151936437 AF467287 NM_001199282 BC064834	-83943	-	TSC_hg19_v1_chr4_+_152020753 NM_001006 BC001708 M84711 AK308947 BC070211 AK291075 AK296121 BC066926 D28374 AK129825 AK311788 M77234 BC009404 BC018954 BC000204 BC004981 BC009219 BC017123 BC071916 L13802 BC006298 DQ891143 DQ894322 AB464167 CU688198	406	+	X75686 BC108890 BC108891 BC108892 BC108893 NM_001128924	76318	-	BC032404 BX647422 NM_001009555 NM_001128923	127228	-	AK098039|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##AF216648|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_006726|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##AF467287|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_001199282|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##BC064834|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_001006|RPS3A|6189|ribosomal protein S3A##BC001708|RPS3A|6189|ribosomal protein S3A##M84711|RPS3A|6189|ribosomal protein S3A##AK308947|RPS3A|6189|ribosomal protein S3A##BC070211|RPS3A|6189|ribosomal protein S3A##AK291075|RPS3A|6189|ribosomal protein S3A##BC066926|RPS3A|6189|ribosomal protein S3A##D28374|RPS3A|6189|ribosomal protein S3A##AK129825|RPS3A|6189|ribosomal protein S3A##AK311788|RPS3A|6189|ribosomal protein S3A##M77234|RPS3A|6189|ribosomal protein S3A##BC009404|RPS3A|6189|ribosomal protein S3A##BC018954|RPS3A|6189|ribosomal protein S3A##BC000204|RPS3A|6189|ribosomal protein S3A##BC004981|RPS3A|6189|ribosomal protein S3A##BC009219|RPS3A|6189|ribosomal protein S3A##BC017123|RPS3A|6189|ribosomal protein S3A##BC071916|RPS3A|6189|ribosomal protein S3A##L13802|RPS3A|6189|ribosomal protein S3A##BC006298|RPS3A|6189|ribosomal protein S3A##DQ891143|RPS3A|6189|ribosomal protein S3A##DQ894322|RPS3A|6189|ribosomal protein S3A##BC108890|SH3D19|152503|SH3 domain containing 19##BC108891|SH3D19|152503|SH3 domain containing 19##BC108892|SH3D19|152503|SH3 domain containing 19##BC108893|SH3D19|152503|SH3 domain containing 19##NM_001128924|SH3D19|152503|SH3 domain containing 19##BC032404|SH3D19|152503|SH3 domain containing 19##BX647422|SH3D19|152503|SH3 domain containing 19##NM_001009555|SH3D19|152503|SH3 domain containing 19##NM_001128923|SH3D19|152503|SH3 domain containing 19	0.0	
chr4	153473467	153473610	reg1032749.p1	4.276	+	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	-16105	+	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	-17244	-	NM_001013415 AY008274	-169874	-	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	127662	-	BC037869 NM_145720	227365	-	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	227483	+	AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154##BC037869|TIGD4|201798|tigger transposable element derived 4##NM_145720|TIGD4|201798|tigger transposable element derived 4##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1	0.0	
chr7	3713304	3713392	reg1033354.p1	4.276	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	-372349	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	-629886	-	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-829540	-	TSC_hg19_v1_chr7_+_4721925 NM_001037165	1008490	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	1008903	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	1101913	+	AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_001037165|FOXK1|221937|forkhead box K1##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415	0.319173	CTCF.p2:6:0.319
chr8	117924972	117925099	reg1034739.p1	4.276	+	TSC_hg19_v1_chr8_-_117887068 NM_006265	-37953	-	AK289505 BC050381 TSC_hg19_v1_chr8_-_117887011 D38551	-38088	-	TSC_hg19_v1_chr8_+_117778793 AK055279 AK315770	-146241	+	BC140924 BC142621 NM_001025357 AB463771 AB181519	25424	+	EF560713 NM_001172811	37476	+	AK298294 NM_001172813 NM_001172815 AL713790	38168	+	NM_006265|RAD21|5885|RAD21 homolog (S. pombe)##AK289505|RAD21|5885|RAD21 homolog (S. pombe)##BC050381|RAD21|5885|RAD21 homolog (S. pombe)##D38551|RAD21|5885|RAD21 homolog (S. pombe)##AK055279|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##AK315770|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC140924|C8orf85|441376|chromosome 8 open reading frame 85##BC142621|C8orf85|441376|chromosome 8 open reading frame 85##NM_001025357|C8orf85|441376|chromosome 8 open reading frame 85##AB181519|C8orf85|441376|chromosome 8 open reading frame 85##EF560713|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172811|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AK298294|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172813|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##NM_001172815|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8##AL713790|SLC30A8|169026|solute carrier family 30 (zinc transporter), member 8	0.845625	CTCF.p2:24:0.846
chrX	109693587	109693767	reg1003249.p2	4.276	+	AK091430 NM_001171689	-10219	-	AB037739 AY121804 NM_020769	-31393	+	TSC_hg19_v1_chrX_-_109561428 AJ007014	-132231	-	BC002909 AK293106 AK297563 AK312270 NM_145234	345356	-	NM_001143981 NM_001143982 NM_001143983	345608	-	AK290504 NM_001128166 NM_001128167 TSC_hg19_v1_chrX_+_110187624 AK315284	493870	+	AK091430|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##NM_001171689|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##AB037739|RGAG1|57529|retrotransposon gag domain containing 1##AY121804|RGAG1|57529|retrotransposon gag domain containing 1##NM_020769|RGAG1|57529|retrotransposon gag domain containing 1##AJ007014|AMMECR1|9949|Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1##BC002909|CHRDL1|91851|chordin-like 1##AK293106|CHRDL1|91851|chordin-like 1##AK297563|CHRDL1|91851|chordin-like 1##AK312270|CHRDL1|91851|chordin-like 1##NM_145234|CHRDL1|91851|chordin-like 1##NM_001143981|CHRDL1|91851|chordin-like 1##NM_001143982|CHRDL1|91851|chordin-like 1##NM_001143983|CHRDL1|91851|chordin-like 1##AK290504|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128166|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##NM_001128167|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3##AK315284|PAK3|5063|p21 protein (Cdc42/Rac)-activated kinase 3	0.0	
chr12	120638816	120638997	reg1013768.p1	4.275	+	BC019014 BC000087 TSC_hg19_v1_chr12_-_120638906 BC070194	-5	-	TSC_hg19_v1_chr12_-_120632504 AB587307 AK297271 BC153881 D86973 NM_006836	-6418	-	TSC_hg19_v1_chr12_+_120554697 BC041995 AK130486	-84197	+	AK129754 AK222571 AK304674 BC107717 D28418 TSC_hg19_v1_chr12_-_120638911 AK222468 AK291109	4	-	AK001313 AK129823 M17885 TSC_hg19_v1_chr12_-_120638914 NM_001002 NM_053275	56	-	BX648777 NM_025157	49053	-	BC019014|RPLP0|6175|ribosomal protein, large, P0##BC000087|RPLP0|6175|ribosomal protein, large, P0##BC070194|RPLP0|6175|ribosomal protein, large, P0##AK297271|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##BC153881|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##D86973|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##NM_006836|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##AK129754|RPLP0|6175|ribosomal protein, large, P0##AK222571|RPLP0|6175|ribosomal protein, large, P0##AK304674|RPLP0|6175|ribosomal protein, large, P0##BC107717|RPLP0|6175|ribosomal protein, large, P0##D28418|RPLP0|6175|ribosomal protein, large, P0##AK222468|RPLP0|6175|ribosomal protein, large, P0##AK291109|RPLP0|6175|ribosomal protein, large, P0##AK001313|RPLP0|6175|ribosomal protein, large, P0##AK129823|RPLP0|6175|ribosomal protein, large, P0##M17885|RPLP0|6175|ribosomal protein, large, P0##NM_001002|RPLP0|6175|ribosomal protein, large, P0##NM_053275|RPLP0|6175|ribosomal protein, large, P0##BX648777|PXN|5829|paxillin##NM_025157|PXN|5829|paxillin	0.077197	
chr12	790911	791072	reg1032575.p1	4.275	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-18276	-	TSC_hg19_v1_chr12_-_752800 AK298043	-38172	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-38813	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	71165	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	71765	+	BC013629 TSC_hg19_v1_chr12_+_1017145	226091	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr15	85861297	85861403	reg1029873.p1	4.275	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-195032	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-336024	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-336113	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	62541	+	AF127481 NM_144767	358917	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	476747	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	0.673638	CTCF.p2:-9:0.674
chr17	19045374	19045554	reg1009283.p2	4.275	+	BC157869 NM_001129778	-14683	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-95178	-	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-137385	-	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	95244	+	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	220505	-	TSC_hg19_v1_chr17_+_19281077 NM_139032 NM_139033 BC007404 BC007992 U29725 AK295376	235726	+	BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1##NM_139032|MAPK7|5598|mitogen-activated protein kinase 7##NM_139033|MAPK7|5598|mitogen-activated protein kinase 7##BC007404|MAPK7|5598|mitogen-activated protein kinase 7##BC007992|MAPK7|5598|mitogen-activated protein kinase 7##U29725|MAPK7|5598|mitogen-activated protein kinase 7##AK295376|MAPK7|5598|mitogen-activated protein kinase 7	0.0	
chr17	57636449	57636605	reg1032356.p1	4.275	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	-227509	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	-338629	+	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	-349130	+	AF461690 NM_001166301 NM_024612 TSC_hg19_v1_chr17_+_57642970 BC024187 AK299151 AK095681 AF260270 AK226048 AB384723 DQ890909 DQ894060	6460	+	TSC_hg19_v1_chr17_+_57697037 NM_004859	60518	+	TSC_hg19_v1_chr17_+_57697265 BC054489 BX640615	60743	+	NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)##NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_004859|CLTC|1213|clathrin, heavy chain (Hc)##BC054489|CLTC|1213|clathrin, heavy chain (Hc)##BX640615|CLTC|1213|clathrin, heavy chain (Hc)	0.672356	CTCF.p2:-7:0.672
chr18	56471384	56471501	reg1032895.p2	4.275	+	TSC_hg19_v1_chr18_+_56338830 AB528440 DQ892319 DQ895521	-132597	+	TSC_hg19_v1_chr18_+_56338790 AB026118	-132645	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	-132714	+	NM_018181 AF295077 BC130618 BC130620	58677	+	TSC_hg19_v1_chr18_+_56530714 AB046849	59413	+	TSC_hg19_v1_chr18_+_56531281 BC036366	59907	+	DQ892319|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##DQ895521|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AB026118|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_018181|ZNF532|55205|zinc finger protein 532##AF295077|ZNF532|55205|zinc finger protein 532##BC130618|ZNF532|55205|zinc finger protein 532##BC130620|ZNF532|55205|zinc finger protein 532##AB046849|ZNF532|55205|zinc finger protein 532##BC036366|ZNF532|55205|zinc finger protein 532	0.396219	CTCF.p2:-31:0.396
chr19	59117793	59117894	reg1024031.p1	4.275	+	TSC_hg19_v1_chr19_+_59086818 BC065480 BC067232 BC043401 AK000827 AK311347 BC000766 BC001952	-31022	+	TSC_hg19_v1_chr19_-_59084939 AF055077 AF055078 NM_003422 NM_198055	-32895	-	TSC_hg19_v1_chr19_-_59084737 BC007777	-33013	-	None	None	None	None	None	None	None	None	None	BC065480|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##BC067232|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##BC043401|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##AK000827|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##AK311347|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##BC000766|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##BC001952|MGC2752|65996|CENPB DNA-binding domains containing 1 pseudogene##AF055077|MZF1|7593|myeloid zinc finger 1##AF055078|MZF1|7593|myeloid zinc finger 1##NM_003422|MZF1|7593|myeloid zinc finger 1##NM_198055|MZF1|7593|myeloid zinc finger 1##BC007777|MZF1|7593|myeloid zinc finger 1	1.582314	CTCF.p2:40:0.503	CTCF.p2:98:0.999
chr20	35203620	35203801	reg1034833.p2	4.275	+	NM_001199515 NM_001199535	-754	+	TSC_hg19_v1_chr20_+_35202041 AK313919 NM_021809 AB042646 BC006549 BC012816 AK074802	-1709	+	TSC_hg19_v1_chr20_+_35201854 NM_001199513 NM_001199514	-1818	+	TSC_hg19_v1_chr20_+_35234142 NM_001199534 NM_018840 NM_199483	30400	+	TSC_hg19_v1_chr20_+_35234167 AF112213	30453	+	TSC_hg19_v1_chr20_+_35234211 BC004446 BC001871 AF274936 S83364	30594	+	NM_001199515|TGIF2|60436|TGFB-induced factor homeobox 2##NM_001199535|TGIF2-C20ORF24|100527943|TGIF2-C20orf24 readthrough##AK313919|TGIF2|60436|TGFB-induced factor homeobox 2##NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2##AB042646|TGIF2|60436|TGFB-induced factor homeobox 2##BC006549|TGIF2|60436|TGFB-induced factor homeobox 2##BC012816|TGIF2|60436|TGFB-induced factor homeobox 2##AK074802|TGIF2|60436|TGFB-induced factor homeobox 2##NM_001199513|TGIF2|60436|TGFB-induced factor homeobox 2##NM_001199514|TGIF2|60436|TGFB-induced factor homeobox 2##NM_001199534|C20orf24|55969|chromosome 20 open reading frame 24##NM_018840|C20orf24|55969|chromosome 20 open reading frame 24##NM_199483|C20orf24|55969|chromosome 20 open reading frame 24##AF112213|C20orf24|55969|chromosome 20 open reading frame 24##BC004446|C20orf24|55969|chromosome 20 open reading frame 24##BC001871|C20orf24|55969|chromosome 20 open reading frame 24##AF274936|C20orf24|55969|chromosome 20 open reading frame 24##S83364|C20orf24|55969|chromosome 20 open reading frame 24	0.0	
chr20	57579884	57580065	reg1028087.p2	4.275	+	TSC_hg19_v1_chr20_+_57556329 BC014952 BX647417 AJ238379 AF161479 AB528731 AK023927 AK023310 AK001316	-23625	+	TSC_hg19_v1_chr20_+_57556319 AK293410 AK304310 NM_198976	-23667	+	TSC_hg19_v1_chr20_+_57470682 M77026	-109310	+	AF009923 BT019915 CU692072 AM392668 AB528116 AF073890 AF136273 BC025419 BC042168 TSC_hg19_v1_chr20_-_57582302	2253	-	TSC_hg19_v1_chr20_-_57582305 AK314931 NM_001336	2331	-	AJ292757 NM_030773	14334	+	BC014952|TH1L|51497|TH1-like (Drosophila)##BX647417|TH1L|51497|TH1-like (Drosophila)##AJ238379|TH1L|51497|TH1-like (Drosophila)##AF161479|TH1L|51497|TH1-like (Drosophila)##AK023927|TH1L|51497|TH1-like (Drosophila)##AK023310|TH1L|51497|TH1-like (Drosophila)##AK001316|TH1L|51497|TH1-like (Drosophila)##AK293410|TH1L|51497|TH1-like (Drosophila)##AK304310|TH1L|51497|TH1-like (Drosophila)##NM_198976|TH1L|51497|TH1-like (Drosophila)##M77026|GNAS|2778|GNAS complex locus##AF009923|CTSZ|1522|cathepsin Z##BT019915|CTSZ|1522|cathepsin Z##AM392668|CTSZ|1522|cathepsin Z##AF073890|CTSZ|1522|cathepsin Z##AF136273|CTSZ|1522|cathepsin Z##BC025419|CTSZ|1522|cathepsin Z##BC042168|CTSZ|1522|cathepsin Z##AK314931|CTSZ|1522|cathepsin Z##NM_001336|CTSZ|1522|cathepsin Z##AJ292757|TUBB1|81027|tubulin, beta 1 class VI##NM_030773|TUBB1|81027|tubulin, beta 1 class VI	0.0	
chr2	8375055	8375209	reg1031395.p2	4.275	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1317545	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1357269	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1368429	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	447071	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	602587	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	768689	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr5	133477071	133477199	reg1010555.p2	4.275	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	-25774	+	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	-26616	+	AK095989 NM_003374	-136312	-	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	35488	-	TSC_hg19_v1_chr5_-_133512642 Z47087 BC020798 NM_006930 NM_170679	35547	-	AB451240 AB451365 CR457417 AB385080 X12646 TSC_hg19_v1_chr5_-_133561733 J03804	84509	-	NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1##Z47087|SKP1|6500|S-phase kinase-associated protein 1##BC020798|SKP1|6500|S-phase kinase-associated protein 1##NM_006930|SKP1|6500|S-phase kinase-associated protein 1##NM_170679|SKP1|6500|S-phase kinase-associated protein 1##AB451240|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##AB451365|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##CR457417|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##X12646|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme##J03804|PPP2CA|5515|protein phosphatase 2, catalytic subunit, alpha isozyme	0.013548	
chr5	138755640	138755760	reg1028385.p1	4.275	+	BC040037 BC050563 NM_194296 AK098740	-15935	-	NM_001161546	-24816	-	GQ477350 DQ892627 EU176703 AK057549 AK292706 BC009931 BC021275 AF151024 NM_016459	-30126	-	BC030162 TSC_hg19_v1_chr5_-_138775145 AK024054	19451	-	AK308138 TSC_hg19_v1_chr5_-_138775199	19494	-	NM_152686 TSC_hg19_v1_chr5_-_138775215	19515	-	BC040037|SPATA24|202051|spermatogenesis associated 24##BC050563|SPATA24|202051|spermatogenesis associated 24##NM_194296|SPATA24|202051|spermatogenesis associated 24##AK098740|SPATA24|202051|spermatogenesis associated 24##NM_001161546|C5orf65|389333|chromosome 5 open reading frame 65##GQ477350|MZB1|51237|marginal zone B and B1 cell-specific protein##DQ892627|MZB1|51237|marginal zone B and B1 cell-specific protein##EU176703|MZB1|51237|marginal zone B and B1 cell-specific protein##AK057549|MZB1|51237|marginal zone B and B1 cell-specific protein##AK292706|MZB1|51237|marginal zone B and B1 cell-specific protein##BC009931|MZB1|51237|marginal zone B and B1 cell-specific protein##BC021275|MZB1|51237|marginal zone B and B1 cell-specific protein##AF151024|MZB1|51237|marginal zone B and B1 cell-specific protein##NM_016459|MZB1|51237|marginal zone B and B1 cell-specific protein##BC030162|DNAJC18|202052|DnaJ (Hsp40) homolog, subfamily C, member 18##AK308138|DNAJC18|202052|DnaJ (Hsp40) homolog, subfamily C, member 18##NM_152686|DNAJC18|202052|DnaJ (Hsp40) homolog, subfamily C, member 18	0.915533	CTCF.p2:-6:0.916
chr5	50218615	50218722	reg1032027.p1	4.275	+	TSC_hg19_v1_chr5_+_49962920 AB463183 AM393004	-255741	+	NM_001178056 NM_024615 AK289369 TSC_hg19_v1_chr5_+_49962800 AL834477 BC075801	-255877	+	AK298680 AK314466 BC105789 NM_001178055	-256936	+	BC031213 NM_002202	460289	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	460585	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	1865321	+	AM393004|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178056|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_024615|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK289369|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AL834477|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC075801|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC031213|ISL1|3670|ISL LIM homeobox 1##NM_002202|ISL1|3670|ISL LIM homeobox 1##AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1	0.987468	CTCF.p2:4:0.987
chr1	101822767	101822948	reg1002731.p1	4.274	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-120287	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-120476	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-331424	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	639630	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	639933	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1673926	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.047531	
chr11	616655	616721	reg1021513.p3	4.274	+	NM_001572 NM_004029 TSC_hg19_v1_chr11_-_616001	-687	-	U53830 U53831 U53832 U73036 TSC_hg19_v1_chr11_-_615951 AK303752	-752	-	AF076494 NM_004031	-1000	-	AF276242 AF301909 TSC_hg19_v1_chr11_-_624945 AY358368 BC038405 AK000226 AK300991 AK308040 AK309157 AK000384 NM_001171968 NM_021924 NM_031264 AF258678 AF258679	8346	-	NM_021920	10484	-	TSC_hg19_v1_chr11_+_637268 EU432112 L12398 NM_000797 S76942	20598	+	NM_001572|IRF7|3665|interferon regulatory factor 7##NM_004029|IRF7|3665|interferon regulatory factor 7##U53830|IRF7|3665|interferon regulatory factor 7##U53831|IRF7|3665|interferon regulatory factor 7##U53832|IRF7|3665|interferon regulatory factor 7##U73036|IRF7|3665|interferon regulatory factor 7##AK303752|IRF7|3665|interferon regulatory factor 7##AF076494|IRF7|3665|interferon regulatory factor 7##NM_004031|IRF7|3665|interferon regulatory factor 7##AF276242|CDHR5|53841|cadherin-related family member 5##AF301909|CDHR5|53841|cadherin-related family member 5##AY358368|CDHR5|53841|cadherin-related family member 5##BC038405|CDHR5|53841|cadherin-related family member 5##AK000226|CDHR5|53841|cadherin-related family member 5##AK300991|CDHR5|53841|cadherin-related family member 5##AK308040|CDHR5|53841|cadherin-related family member 5##AK309157|CDHR5|53841|cadherin-related family member 5##AK000384|CDHR5|53841|cadherin-related family member 5##NM_001171968|CDHR5|53841|cadherin-related family member 5##NM_021924|CDHR5|53841|cadherin-related family member 5##NM_031264|CDHR5|53841|cadherin-related family member 5##AF258678|CDHR5|53841|cadherin-related family member 5##AF258679|CDHR5|53841|cadherin-related family member 5##NM_021920|SCT|6343|secretin##EU432112|DRD4|1815|dopamine receptor D4##L12398|DRD4|1815|dopamine receptor D4##NM_000797|DRD4|1815|dopamine receptor D4##S76942|DRD4|1815|dopamine receptor D4	0.0	
chr11	70295230	70295334	reg1030108.p1	4.274	+	TSC_hg19_v1_chr11_+_70244653 NM_001184740 NM_005231 NM_138565 AK222613 AK291097 BC033889 BC008799 M98343	-50629	+	TSC_hg19_v1_chr11_-_70244476 AK125463	-50767	-	D49354 TSC_hg19_v1_chr11_+_70194450	-100861	+	AF141901 BC114484 BC113876 TSC_hg19_v1_chr11_-_70507895	212585	-	TSC_hg19_v1_chr11_-_70507919 AB208027 NM_133266	212636	-	BC093885 BC112097 BC143389 TSC_hg19_v1_chr11_-_70507947	212668	-	NM_001184740|CTTN|2017|cortactin##NM_005231|CTTN|2017|cortactin##NM_138565|CTTN|2017|cortactin##AK222613|CTTN|2017|cortactin##AK291097|CTTN|2017|cortactin##BC033889|CTTN|2017|cortactin##BC008799|CTTN|2017|cortactin##M98343|CTTN|2017|cortactin##D49354|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##AF141901|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC114484|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC113876|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##AB208027|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##NM_133266|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC093885|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC112097|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2##BC143389|SHANK2|22941|SH3 and multiple ankyrin repeat domains 2	0.946534	CTCF.p2:11:0.947
chr13	40634547	40634670	reg1026449.p1	4.274	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-404747	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-457246	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-457281	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	606104	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	710684	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	710724	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.0	
chr1	54965252	54965338	reg1034529.p1	4.274	+	TSC_hg19_v1_chr1_-_54872087 NM_001009955	-93211	-	NM_018070 NM_145716 TSC_hg19_v1_chr1_-_54872066	-93273	-	CU688156 AK289474 BC003605 BC127866 BC066365 TSC_hg19_v1_chr1_-_54871828 AF500116	-93507	-	TSC_hg19_v1_chr1_+_55007956 AK091112	42666	+	NM_015547 NM_147161 TSC_hg19_v1_chr1_+_55013900 BC001517 AK023937 AK223570 AB014607 BC093844 BC093846 AF416921 AF416922	48599	+	CU676764 AY358629 BC015993 BC020874 NM_176782 AK091901 AX747244	123853	-	NM_001009955|SSBP3|23648|single stranded DNA binding protein 3##NM_018070|SSBP3|23648|single stranded DNA binding protein 3##NM_145716|SSBP3|23648|single stranded DNA binding protein 3##AK289474|SSBP3|23648|single stranded DNA binding protein 3##BC003605|SSBP3|23648|single stranded DNA binding protein 3##BC066365|SSBP3|23648|single stranded DNA binding protein 3##AF500116|SSBP3|23648|single stranded DNA binding protein 3##AK091112|ACOT11|26027|acyl-CoA thioesterase 11##NM_015547|ACOT11|26027|acyl-CoA thioesterase 11##NM_147161|ACOT11|26027|acyl-CoA thioesterase 11##BC001517|ACOT11|26027|acyl-CoA thioesterase 11##AK023937|ACOT11|26027|acyl-CoA thioesterase 11##AK223570|ACOT11|26027|acyl-CoA thioesterase 11##AB014607|ACOT11|26027|acyl-CoA thioesterase 11##BC093844|ACOT11|26027|acyl-CoA thioesterase 11##BC093846|ACOT11|26027|acyl-CoA thioesterase 11##AF416921|ACOT11|26027|acyl-CoA thioesterase 11##AF416922|ACOT11|26027|acyl-CoA thioesterase 11##AY358629|FAM151A|338094|family with sequence similarity 151, member A##BC015993|FAM151A|338094|family with sequence similarity 151, member A##BC020874|FAM151A|338094|family with sequence similarity 151, member A##NM_176782|FAM151A|338094|family with sequence similarity 151, member A##AK091901|FAM151A|338094|family with sequence similarity 151, member A	0.474701	CTCF.p2:-2:0.475
chr16	71928228	71928408	reg1033299.p1	4.274	+	TSC_hg19_v1_chr16_-_71918084 BC012116 AK313693 BC004563 NM_001201552 NM_001201554 NM_001201556	-10274	-	AF070588 AK296603 NM_001201553 NM_017530	-10891	-	TSC_hg19_v1_chr16_+_71879908 NM_001137675	-48397	+	TSC_hg19_v1_chr16_+_71929421 AK291388 AK297336 BC103745	1096	+	TSC_hg19_v1_chr16_+_71929438 AK295066 AK301918 AK057902 AK293022 AK297088 AB097052 D79996 BC000430 BC004359 NM_014761 BC000116	1125	+	AY164485 NM_181536	105558	-	BC012116|ZNF821|55565|zinc finger protein 821##AK313693|ZNF821|55565|zinc finger protein 821##BC004563|ZNF821|55565|zinc finger protein 821##NM_001201552|ZNF821|55565|zinc finger protein 821##NM_001201554|ZNF821|55565|zinc finger protein 821##NM_001201556|ZNF821|55565|zinc finger protein 821##AF070588|ZNF821|55565|zinc finger protein 821##AK296603|ZNF821|55565|zinc finger protein 821##NM_001201553|ZNF821|55565|zinc finger protein 821##NM_017530|ZNF821|55565|zinc finger protein 821##NM_001137675|ATXN1L|342371|ataxin 1-like##AK291388|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK297336|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC103745|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK295066|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK301918|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK057902|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK293022|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK297088|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AB097052|IST1|9798|increased sodium tolerance 1 homolog (yeast)##D79996|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC000430|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC004359|IST1|9798|increased sodium tolerance 1 homolog (yeast)##NM_014761|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC000116|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AY164485|PKD1L3|342372|polycystic kidney disease 1-like 3##NM_181536|PKD1L3|342372|polycystic kidney disease 1-like 3	0.0	
chr19	13958613	13958737	reg1035658.p2	4.274	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	-11573	-	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-52430	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-73391	+	BC101209 BC101210 NM_001098622	29387	+	AK097431 NM_024323	58233	-	NM_017721 TSC_hg19_v1_chr19_+_14017006	58305	+	AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57##NM_017721|CC2D1A|54862|coiled-coil and C2 domain containing 1A	0.592078	CTCF.p2:-6:0.592
chr20	62169745	62169830	reg1003757.p2	4.274	+	TSC_hg19_v1_chr20_-_62168681 AB527573 X78549 AK301691 AK315232 BC035843 NM_005975 AK301364	-1083	-	TSC_hg19_v1_chr20_+_62152117 BC002531 NM_024299 AK024699 AK311318	-17654	+	TSC_hg19_v1_chr20_-_62130437 X70940 AK307536 NM_001958 BC110409	-39274	-	AB527384 NM_080823	9048	-	BC000912 NM_024059	14585	+	AB051556 BC150283 NM_033405	29319	-	X78549|PTK6|5753|PTK6 protein tyrosine kinase 6##AK301691|PTK6|5753|PTK6 protein tyrosine kinase 6##AK315232|PTK6|5753|PTK6 protein tyrosine kinase 6##BC035843|PTK6|5753|PTK6 protein tyrosine kinase 6##NM_005975|PTK6|5753|PTK6 protein tyrosine kinase 6##AK301364|PTK6|5753|PTK6 protein tyrosine kinase 6##BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##X70940|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##AK307536|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##NM_001958|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC110409|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##NM_080823|SRMS|6725|src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites##BC000912|C20orf195|79025|chromosome 20 open reading frame 195##NM_024059|C20orf195|79025|chromosome 20 open reading frame 195##AB051556|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC150283|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##NM_033405|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285	0.996117	CTCF.p2:-11:0.996
chr5	158312118	158312277	reg1030034.p1	4.274	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1026107	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-1127817	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-1141457	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	214260	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	214545	-	AK304228 NM_001199382	322451	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.0	
chr11	65512088	65512206	reg1032500.p1	4.273	+	TSC_hg19_v1_chr11_-_65488270 DQ892277 DQ895477 AF312034 AK024627 AK225131 AK297660 BC023588 AF346606 NM_032193	-23872	-	TSC_hg19_v1_chr11_-_65487976 L08647	-24178	-	BC117167 BC143290 BC143296 BC093032 TSC_hg19_v1_chr11_+_65479722 AK304664 BC064912 U67734 AB463743 HQ258620 BC013211 BC000166 U40989	-32372	+	NM_138368	35674	-	NM_004561 BC059408 TSC_hg19_v1_chr11_+_65554533	42376	+	TSC_hg19_v1_chr11_+_65554569 AK291711 BX648725	42448	+	DQ892277|RNASEH2C|84153|ribonuclease H2, subunit C##DQ895477|RNASEH2C|84153|ribonuclease H2, subunit C##AF312034|RNASEH2C|84153|ribonuclease H2, subunit C##AK024627|RNASEH2C|84153|ribonuclease H2, subunit C##AK225131|RNASEH2C|84153|ribonuclease H2, subunit C##AK297660|RNASEH2C|84153|ribonuclease H2, subunit C##BC023588|RNASEH2C|84153|ribonuclease H2, subunit C##AF346606|RNASEH2C|84153|ribonuclease H2, subunit C##NM_032193|RNASEH2C|84153|ribonuclease H2, subunit C##L08647|RNASEH2C|84153|ribonuclease H2, subunit C##BC117167|KAT5|10524|K(lysine) acetyltransferase 5##BC143290|KAT5|10524|K(lysine) acetyltransferase 5##BC143296|KAT5|10524|K(lysine) acetyltransferase 5##BC093032|KAT5|10524|K(lysine) acetyltransferase 5##AK304664|KAT5|10524|K(lysine) acetyltransferase 5##BC064912|KAT5|10524|K(lysine) acetyltransferase 5##U67734|KAT5|10524|K(lysine) acetyltransferase 5##HQ258620|KAT5|10524|K(lysine) acetyltransferase 5##BC013211|KAT5|10524|K(lysine) acetyltransferase 5##BC000166|KAT5|10524|K(lysine) acetyltransferase 5##U40989|KAT5|10524|K(lysine) acetyltransferase 5##NM_138368|DKFZp761E198|91056|adaptor protein 5##NM_004561|OVOL1|5017|ovo-like 1(Drosophila)##BC059408|OVOL1|5017|ovo-like 1(Drosophila)##AK291711|OVOL1|5017|ovo-like 1(Drosophila)##BX648725|OVOL1|5017|ovo-like 1(Drosophila)	0.99544	CTCF.p2:-21:0.995
chr1	27018938	27019118	reg1026661.p2	4.273	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	-146670	+	TSC_hg19_v1_chr1_+_26872335 AK092955	-146705	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-162693	+	NM_006015 NM_139135 AF231056	3494	+	AB210022 AF219114 AB051293 AF265208 TSC_hg19_v1_chr1_+_27024003	4941	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	82260	+	AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.0	
chr3	133260155	133260335	reg1032213.p1	4.273	+	NM_003571 BC113518 BC113520 HQ258421 U48224	-141387	+	TSC_hg19_v1_chr3_+_132757234 AY358381 BC000568	-503011	+	NM_001136469 NM_023943 TSC_hg19_v1_chr3_+_132757202	-503058	+	TSC_hg19_v1_chr3_+_133292443 NM_001134422 NM_017548	32231	+	TSC_hg19_v1_chr3_+_133292588 AF103803	32327	+	TSC_hg19_v1_chr3_+_133292835 BC007338	32549	+	NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin##HQ258421|BFSP2|8419|beaded filament structural protein 2, phakinin##U48224|BFSP2|8419|beaded filament structural protein 2, phakinin##AY358381|TMEM108|66000|transmembrane protein 108##BC000568|TMEM108|66000|transmembrane protein 108##NM_001136469|TMEM108|66000|transmembrane protein 108##NM_023943|TMEM108|66000|transmembrane protein 108##NM_001134422|CDV3|55573|CDV3 homolog (mouse)##NM_017548|CDV3|55573|CDV3 homolog (mouse)##AF103803|CDV3|55573|CDV3 homolog (mouse)##BC007338|CDV3|55573|CDV3 homolog (mouse)	0.0	
chr6	27487206	27487386	reg1008748.p3	4.273	+	TSC_hg19_v1_chr6_-_27440879 BC022992 AK123011 AK312804 NM_007149	-46595	-	TSC_hg19_v1_chr6_+_27356537 NM_001076781 AK092633 AK294965 AX747641 BC132797	-130741	+	AF352327 AF336874 BC107050 NM_032030	-194738	+	EU446971 TSC_hg19_v1_chr6_-_27775708 NM_003519 AK312114 BC093759 BC093761	288427	-	BC112254 BC112256 TSC_hg19_v1_chr6_+_27775950 AK311766 BC062305 NM_003509 HQ258047	288645	+	BC007518 TSC_hg19_v1_chr6_+_27777828 AK311991 NM_003536 EU446975 BC096128 BC096129 BC096130 BC143046 BC148243 BC148250	290486	+	BC022992|ZNF184|7738|zinc finger protein 184##AK123011|ZNF184|7738|zinc finger protein 184##AK312804|ZNF184|7738|zinc finger protein 184##NM_007149|ZNF184|7738|zinc finger protein 184##NM_001076781|ZNF391|346157|zinc finger protein 391##AK092633|ZNF391|346157|zinc finger protein 391##AK294965|ZNF391|346157|zinc finger protein 391##BC132797|ZNF391|346157|zinc finger protein 391##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83##EU446971|HIST1H2BL|8340|histone cluster 1, H2bl##NM_003519|HIST1H2BL|8340|histone cluster 1, H2bl##AK312114|HIST1H2BL|8340|histone cluster 1, H2bl##BC093759|HIST1H2BL|8340|histone cluster 1, H2bl##BC093761|HIST1H2BL|8340|histone cluster 1, H2bl##BC112254|HIST1H2AI|8329|histone cluster 1, H2ai##BC112256|HIST1H2AI|8329|histone cluster 1, H2ai##AK311766|HIST1H2AI|8329|histone cluster 1, H2ai##BC062305|HIST1H3F|8968|histone cluster 1, H3f##NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai##HQ258047|HIST1H2AM|8336|histone cluster 1, H2am##BC007518|HIST1H3H|8357|histone cluster 1, H3h##AK311991|HIST1H3H|8357|histone cluster 1, H3h##NM_003536|HIST1H3H|8357|histone cluster 1, H3h##EU446975|HIST1H3H|8357|histone cluster 1, H3h##BC096128|HIST1H3H|8357|histone cluster 1, H3h##BC096129|HIST1H3H|8357|histone cluster 1, H3h##BC096130|HIST1H3H|8357|histone cluster 1, H3h##BC143046|HIST1H3H|8357|histone cluster 1, H3h##BC148243|HIST1H3H|8357|histone cluster 1, H3h##BC148250|HIST1H3H|8357|histone cluster 1, H3h	0.0	
chr6	99689887	99690021	reg1032225.p2	4.273	+	TSC_hg19_v1_chr6_-_99395817 AK313076 BC055010 BC039819 NM_012160	-294127	-	TSC_hg19_v1_chr6_-_99395800 BC091484 BC032641	-294165	-	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	-407282	+	BC004869 BC011583 NM_032511	107576	-	AF193016 BC015634 BC001534 BC063463 CU687730 AB590714 AF351615 AK056955 AL136726 NM_017421	152099	-	AF314185 TSC_hg19_v1_chr6_-_99849313 AL080186	159337	-	AK313076|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC055010|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC039819|FBXL4|26235|F-box and leucine-rich repeat protein 4##NM_012160|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC091484|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC032641|FBXL4|26235|F-box and leucine-rich repeat protein 4##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2##BC004869|C6orf168|84553|chromosome 6 open reading frame 168##BC011583|C6orf168|84553|chromosome 6 open reading frame 168##NM_032511|C6orf168|84553|chromosome 6 open reading frame 168##AF193016|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC015634|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC001534|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC063463|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AF351615|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AK056955|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AL136726|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##NM_017421|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AF314185|PNISR|25957|PNN-interacting serine/arginine-rich protein##AL080186|PNISR|25957|PNN-interacting serine/arginine-rich protein	0.995161	CTCF.p2:37:0.995
chr11	113424747	113424860	reg1034893.p1	4.272	+	S69899 BC021195 NM_000795 NM_016574 M30625	-78828	-	AJ541797 NM_178510 AF487542	-166244	+	NM_017868 AK023921 TSC_hg19_v1_chr11_+_113185315 AK292331 AK091887 BC011546 BC019086 BC032355	-239513	+	AK295366 BC047222 AK294313 BC028065 BC121802 BC121803 NM_030770 TSC_hg19_v1_chr11_-_113577091 AB028140	152255	-	TSC_hg19_v1_chr11_-_113644415 U54996 BC128264	219608	-	TSC_hg19_v1_chr11_-_113644447 AK300746 AK312925	219647	-	S69899|DRD2|1813|dopamine receptor D2##BC021195|DRD2|1813|dopamine receptor D2##NM_000795|DRD2|1813|dopamine receptor D2##NM_016574|DRD2|1813|dopamine receptor D2##M30625|DRD2|1813|dopamine receptor D2##AJ541797|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_178510|ANKK1|255239|ankyrin repeat and kinase domain containing 1##AF487542|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_017868|TTC12|54970|tetratricopeptide repeat domain 12##AK023921|TTC12|54970|tetratricopeptide repeat domain 12##AK292331|TTC12|54970|tetratricopeptide repeat domain 12##AK091887|TTC12|54970|tetratricopeptide repeat domain 12##BC011546|TTC12|54970|tetratricopeptide repeat domain 12##BC019086|TTC12|54970|tetratricopeptide repeat domain 12##BC032355|TTC12|54970|tetratricopeptide repeat domain 12##AK295366|TMPRSS5|80975|transmembrane protease, serine 5##BC047222|TMPRSS5|80975|transmembrane protease, serine 5##AK294313|TMPRSS5|80975|transmembrane protease, serine 5##BC028065|TMPRSS5|80975|transmembrane protease, serine 5##BC121802|TMPRSS5|80975|transmembrane protease, serine 5##BC121803|TMPRSS5|80975|transmembrane protease, serine 5##NM_030770|TMPRSS5|80975|transmembrane protease, serine 5##AB028140|TMPRSS5|80975|transmembrane protease, serine 5##U54996|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##BC128264|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AK300746|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AK312925|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)	0.233326	
chr12	12714513	12714612	reg1030579.p2	4.272	+	TSC_hg19_v1_chr12_+_12510051 NM_058169 AK075028 BC013668 AY037865 AY037866 DQ891778 DQ894962 CU680646	-204397	+	AY358563 TSC_hg19_v1_chr12_-_12503210 AK023622 NM_018050 AK001160 BC032998	-211390	-	BC117136 BC126405 BC143725 AF074264 NM_002336 TSC_hg19_v1_chr12_-_12419947	-294720	-	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	838	-	TSC_hg19_v1_chr12_+_12764831 BC106052 AF039081 NM_001310 AK307202	50233	+	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	50321	+	NM_058169|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AK075028|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##BC013668|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037865|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037866|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ891778|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ894962|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY358563|MANSC1|54682|MANSC domain containing 1##AK023622|MANSC1|54682|MANSC domain containing 1##NM_018050|MANSC1|54682|MANSC domain containing 1##AK001160|MANSC1|54682|MANSC domain containing 1##BC032998|MANSC1|54682|MANSC domain containing 1##BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6##BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6##BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6##AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6##NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6##AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16##BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2##AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2##AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2##BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2	0.0	
chr12	4255595	4255762	reg1029043.p1	4.272	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-273178	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-393296	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-393410	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	127366	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	174713	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	233122	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.0	
chr12	68092642	68092812	reg1033413.p2	4.272	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	-50104	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-429297	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-429555	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	460695	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	526825	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	554577	-	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22	0.0	
chr3	121711617	121711797	reg1034467.p2	4.272	+	NM_001145998 NM_021082 AK289820 AK296895 AK302002 AK304189 BC020743 BC044572 BC038445 S78203	-98475	+	AF217516 NM_018456 TSC_hg19_v1_chr3_+_121554083 BC014589 AY049020 BC014209 AF517829 AK301560 AB528527 CU676923 DQ892648 DQ895887	-157627	+	TSC_hg19_v1_chr3_-_121553908 AB062481 AY714228 NM_001023570 NM_001023571	-157780	-	AY672837 AY672839 BC044240 AY134857 TSC_hg19_v1_chr3_-_121741095 AK129974 NM_001199799 NM_001199800 NM_175924	29340	-	NM_001206924 NM_001206925 NM_175862 AK294663 AK301237 AK316203 BC040261 L25259 AK291497 AK313103	62547	+	NM_006889 NM_176892 U04343	85015	+	NM_001145998|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##NM_021082|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK289820|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK296895|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK302002|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK304189|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC020743|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC044572|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC038445|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##S78203|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AF217516|EAF2|55840|ELL associated factor 2##NM_018456|EAF2|55840|ELL associated factor 2##BC014589|EAF2|55840|ELL associated factor 2##AY049020|EAF2|55840|ELL associated factor 2##BC014209|EAF2|55840|ELL associated factor 2##AF517829|EAF2|55840|ELL associated factor 2##AK301560|EAF2|55840|ELL associated factor 2##DQ892648|EAF2|55840|ELL associated factor 2##DQ895887|EAF2|55840|ELL associated factor 2##AB062481|IQCB1|9657|IQ motif containing B1##AY714228|IQCB1|9657|IQ motif containing B1##NM_001023570|IQCB1|9657|IQ motif containing B1##NM_001023571|IQCB1|9657|IQ motif containing B1##AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1##BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199799|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199800|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001206924|CD86|942|CD86 molecule##NM_001206925|CD86|942|CD86 molecule##NM_175862|CD86|942|CD86 molecule##AK294663|CD86|942|CD86 molecule##AK301237|CD86|942|CD86 molecule##AK316203|CD86|942|CD86 molecule##BC040261|CD86|942|CD86 molecule##L25259|CD86|942|CD86 molecule##AK291497|CD86|942|CD86 molecule##AK313103|CD86|942|CD86 molecule##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule	0.0	
chr3	16553572	16553745	reg1033186.p2	4.272	+	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-246950	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	-247269	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-337464	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	1360	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	1566	-	BX648638 AK303026 NM_001190811	92612	-	NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like	0.011037	
chr4	143403260	143403404	reg1029605.p1	4.272	+	AK290619 NM_000585 NM_172175 BC018149 U14407	-845566	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-1261246	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-1261277	+	NM_001101669 NM_003866	364271	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	702732	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	702793	+	AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38	0.0	
chr5	142814961	142815119	reg1028252.p2	4.272	+	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-30874	-	TSC_hg19_v1_chr5_-_142784036 AK302050 NM_001018076	-31008	-	TSC_hg19_v1_chr5_-_142783310 AJ888004	-31673	-	NM_001018074 NM_001018075 NM_001018077	36	-	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	376718	+	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	735095	-	BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ888004|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5	0.0	
chr5	79982734	79982846	reg1030401.p2	4.272	+	TSC_hg19_v1_chr5_-_79950786 BC003584 BC071996 NM_000791	-31995	-	BC004177 BC011817 BC098436 TSC_hg19_v1_chr5_+_79950543 U61981 BC017273	-32270	+	TSC_hg19_v1_chr5_+_79950481 J04810	-32307	+	TSC_hg19_v1_chr5_+_80256463 BC126112 BC136296 BC143870 NM_006909	273692	+	AF023130 AF181250 TSC_hg19_v1_chr5_+_80256561	273769	+	NM_001099735 NM_001099736 NM_001825 TSC_hg19_v1_chr5_+_80529140 AK313293 BC029140 AK122769	546358	+	BC003584|DHFR|1719|dihydrofolate reductase##BC071996|DHFR|1719|dihydrofolate reductase##NM_000791|DHFR|1719|dihydrofolate reductase##BC004177|MSH3|4437|mutS homolog 3 (E. coli)##BC011817|MSH3|4437|mutS homolog 3 (E. coli)##BC098436|MSH3|4437|mutS homolog 3 (E. coli)##U61981|MSH3|4437|mutS homolog 3 (E. coli)##BC017273|MSH3|4437|mutS homolog 3 (E. coli)##J04810|MSH3|4437|mutS homolog 3 (E. coli)##BC126112|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC136296|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC143870|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_006909|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF023130|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF181250|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_001099735|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001099736|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001825|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK313293|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##BC029140|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK122769|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)	0.319058	CTCF.p2:-8:0.319
chr6	148572545	148572667	reg1027712.p1	4.272	+	TSC_hg19_v1_chr6_+_147829825 NM_001030060	-742787	+	TSC_hg19_v1_chr6_+_147527118 AK128121	-1045496	+	NM_001127715 NM_139244 AL834152 BC107737 BC113382 BC113408	-1047050	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	91157	+	TSC_hg19_v1_chr6_+_148663973 AB018333	91384	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	91585	+	NM_001030060|SAMD5|389432|sterile alpha motif domain containing 5##AK128121|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_001127715|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##NM_139244|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AL834152|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC107737|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113382|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##BC113408|STXBP5|134957|syntaxin binding protein 5 (tomosyn)##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1	0.951823	CTCF.p2:29:0.952
chrX	112184805	112184909	reg1024019.p2	4.272	+	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	-100795	-	AB384557 AY987378 NM_001113490	-118504	-	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	-261518	-	NM_000868 U49516 BC028688 AK295753 TSC_hg19_v1_chrX_+_113818558 M81778	1633715	+	X95302 AK308523 GQ494004 U70981 AK291957 NM_000640 Y08768 AK309444	2067317	-	NM_001145346 AK301904	2239118	+	AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2##GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2##U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2##Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_001145346|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##AK301904|RBMXL3|139804|RNA binding motif protein, X-linked-like 3	0.969992	CTCF.p2:0:0.970
chr15	23742945	23743080	reg1037442.p1	4.271	+	TSC_hg19_v1_chr15_-_23378229 AF041081 AF041080	-364768	-	TSC_hg19_v1_chr15_-_23378205 AK308640	-364822	-	DQ309040 BC048987 TSC_hg19_v1_chr15_-_23208467	-534601	-	NM_005664	67441	+	AK309383 TSC_hg19_v1_chr15_+_23810820 BC044639 BC013970 BC070293 EU446987 CU692226	67856	+	NM_019066 TSC_hg19_v1_chr15_-_23893004	149992	-	AF041081|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AF041080|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##AK308640|HERC2P2|400322|hect domain and RLD 2 pseudogene 2##DQ309040|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##BC048987|WHAMMP3|339005|WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 3##NM_005664|MKRN3|7681|makorin ring finger protein 3##BC044639|MKRN3|7681|makorin ring finger protein 3##BC070293|MKRN3|7681|makorin ring finger protein 3##EU446987|MKRN3|7681|makorin ring finger protein 3##NM_019066|MAGEL2|54551|MAGE-like 2	0.11564	
chr16	84596064	84596244	reg1030001.p2	4.271	+	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	-57863	-	TSC_hg19_v1_chr16_+_84402143 AK300526 AY791884 BX648333 NM_014861 AK316128 CR749829	-194012	+	AF302109 NM_021197 AF169631 TSC_hg19_v1_chr16_+_84328440 AK075061 BC029159 DQ893365 DQ896682	-267666	+	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	55422	-	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	55506	-	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	85980	+	BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##AK300526|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AY791884|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##BX648333|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##NM_014861|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AK316128|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##CR749829|ATP2C2|9914|ATPase, Ca++ transporting, type 2C, member 2##AF302109|WFDC1|58189|WAP four-disulfide core domain 1##NM_021197|WFDC1|58189|WAP four-disulfide core domain 1##AF169631|WFDC1|58189|WAP four-disulfide core domain 1##AK075061|WFDC1|58189|WAP four-disulfide core domain 1##BC029159|WFDC1|58189|WAP four-disulfide core domain 1##DQ893365|WFDC1|58189|WAP four-disulfide core domain 1##DQ896682|WFDC1|58189|WAP four-disulfide core domain 1##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)	0.064746	
chr2	130055081	130055177	reg1022657.p1	4.271	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-978829	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-1127082	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-1206268	+	NM_032144 AL136727	682106	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	831729	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	847482	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.086898	
chr2	208153522	208153698	reg1029946.p2	4.271	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-121985	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-122954	-	BC112076 BC112078 NM_173077 AJ422118	-349310	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	241033	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	241111	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	241171	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.0	
chr5	88174932	88175045	reg1033374.p1	4.271	+	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	-55315	-	TSC_hg19_v1_chr5_-_87980643 AK125167	-194281	-	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	-205843	-	TSC_hg19_v1_chr5_-_88179002 AK312472 L08895 AK307883 BC026341	4018	-	TSC_hg19_v1_chr5_-_88179279 NM_001193350 NM_002397	4297	-	TSC_hg19_v1_chr5_+_88185094 AL050132	10132	+	EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C##AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##AK312472|MEF2C|4208|myocyte enhancer factor 2C##L08895|MEF2C|4208|myocyte enhancer factor 2C##AK307883|MEF2C|4208|myocyte enhancer factor 2C##BC026341|MEF2C|4208|myocyte enhancer factor 2C##NM_001193350|MEF2C|4208|myocyte enhancer factor 2C##NM_002397|MEF2C|4208|myocyte enhancer factor 2C	0.024149	
chr6	109775996	109776135	reg1029728.p1	4.271	+	BC052983 AK021999 TSC_hg19_v1_chr6_-_109775467	-620	-	DQ363562 DQ423529 NM_001111298 NM_173672	-13692	-	TSC_hg19_v1_chr6_+_109762204 DQ891879 CU674004	-13802	+	TSC_hg19_v1_chr6_-_109776846 BC036514	774	-	TSC_hg19_v1_chr6_-_109776945 BC009972	878	-	AK225049 TSC_hg19_v1_chr6_-_109776948 AK025392	886	-	BC052983|MICAL1|64780|microtubule associated monoxygenase, calponin and LIM domain containing 1##AK021999|MICAL1|64780|microtubule associated monoxygenase, calponin and LIM domain containing 1##DQ363562|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##DQ423529|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##NM_001111298|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##NM_173672|PPIL6|285755|peptidylprolyl isomerase (cyclophilin)-like 6##DQ891879|SMPD2|6610|sphingomyelin phosphodiesterase 2, neutral membrane (neutral sphingomyelinase)##BC036514|MICAL1|64780|microtubule associated monoxygenase, calponin and LIM domain containing 1##BC009972|MICAL1|64780|microtubule associated monoxygenase, calponin and LIM domain containing 1##AK225049|MICAL1|64780|microtubule associated monoxygenase, calponin and LIM domain containing 1##AK025392|MICAL1|64780|microtubule associated monoxygenase, calponin and LIM domain containing 1	0.024263	
chr9	2336201	2336342	reg1030837.p2	4.271	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-320975	+	AF130729 NM_181872	-1285662	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-1285901	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	285536	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	285803	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	285841	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.97233	CTCF.p2:0:0.972
chr9	68485030	68485158	reg1037841.p1	4.271	+	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	-558278	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-1931819	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-1990898	-	TSC_hg19_v1_chr9_+_68726468 AK311167	241408	+	TSC_hg19_v1_chr9_+_69065493 AK311167	580444	+	NM_001085476	717109	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6	0.261201	CTCF.p2:-9:0.261
chr10	74033815	74033894	reg1020402.p5	4.270	+	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-30	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-57743	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-58066	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	80824	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	81072	-	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	249865	-	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1	0.0	
chr1	173384727	173384885	reg1031972.p1	4.270	+	CR542033 D90224 X79929 NM_003326	-208414	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	-210153	-	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	-364750	-	TSC_hg19_v1_chr1_-_173446300 AK127238	61502	-	TSC_hg19_v1_chr1_+_173446473 AK300680	61667	+	TSC_hg19_v1_chr1_+_173446484 BC035857 NM_004905 AK289352 BC025421 D14662 BC053550 CU690218 AJ844621	61721	+	CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK127238|LOC100506023|100506023|uncharacterized LOC100506023##AK300680|PRDX6|9588|peroxiredoxin 6##BC035857|PRDX6|9588|peroxiredoxin 6##NM_004905|PRDX6|9588|peroxiredoxin 6##AK289352|PRDX6|9588|peroxiredoxin 6##BC025421|PRDX6|9588|peroxiredoxin 6##D14662|PRDX6|9588|peroxiredoxin 6##BC053550|PRDX6|9588|peroxiredoxin 6##AJ844621|PRDX6|9588|peroxiredoxin 6	0.0	
chr1	23889073	23889140	reg1031278.p2	4.270	+	NM_002167 X69111	-2822	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	-3122	-	L22846 NM_004091	-31395	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	129174	+	TSC_hg19_v1_chr1_+_24018295 BC018970	129193	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	180798	+	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11##BC018970|RPL11|6135|ribosomal protein L11##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)	0.0	
chr1	247493204	247493346	reg1034216.p1	4.270	+	BC126341 BC126367 NM_173858	-73952	+	BC032514 BC096349 BC096350 BC096351 BC099661 BC013605 AK054647 NM_001243740 NM_003431	-157991	-	TSC_hg19_v1_chr1_-_247275541 AK127619 NM_207401	-217653	-	TSC_hg19_v1_chr1_-_247494994 BC007263 NM_032752	1742	-	AK314998 NM_001079821 NM_001127461 TSC_hg19_v1_chr1_+_247579474 AB208891	86194	+	AF410477 AF427617 NM_001127462 NM_001243133 NM_004895 NM_183395	88075	+	BC126341|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC126367|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##NM_173858|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC032514|ZNF124|7678|zinc finger protein 124##BC096349|ZNF124|7678|zinc finger protein 124##BC096350|ZNF124|7678|zinc finger protein 124##BC096351|ZNF124|7678|zinc finger protein 124##BC099661|ZNF124|7678|zinc finger protein 124##BC013605|ZNF124|7678|zinc finger protein 124##AK054647|ZNF124|7678|zinc finger protein 124##NM_001243740|ZNF124|7678|zinc finger protein 124##NM_003431|ZNF124|7678|zinc finger protein 124##AK127619|C1orf229|388759|chromosome 1 open reading frame 229##NM_207401|C1orf229|388759|chromosome 1 open reading frame 229##BC007263|ZNF496|84838|zinc finger protein 496##NM_032752|ZNF496|84838|zinc finger protein 496##AK314998|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001079821|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127461|NLRP3|114548|NLR family, pyrin domain containing 3##AB208891|NLRP3|114548|NLR family, pyrin domain containing 3##AF410477|NLRP3|114548|NLR family, pyrin domain containing 3##AF427617|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127462|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001243133|NLRP3|114548|NLR family, pyrin domain containing 3##NM_004895|NLRP3|114548|NLR family, pyrin domain containing 3##NM_183395|NLRP3|114548|NLR family, pyrin domain containing 3	0.0	
chr1	66801666	66801847	reg1033639.p1	4.270	+	TSC_hg19_v1_chr1_+_66798096 AK294441	-3661	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	-3903	+	AB209081 NM_001037340 AK290006	-343353	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	198128	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	416368	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	416409	+	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1	0.0	
chr20	43104204	43104353	reg1024461.p1	4.270	+	TSC_hg19_v1_chr20_+_43030005 AB463726 HQ692860 HQ692869 X76930 AB307703	-74256	+	BC137539 BC137540 TSC_hg19_v1_chr20_+_43029974	-74296	+	X87872 X87870 TSC_hg19_v1_chr20_+_43029954 X87871	-74332	+	TSC_hg19_v1_chr20_+_43104525 BC003071 NM_001039199 NM_024331 AK314045 CR936621	269	+	CU675237 DQ896714 DQ893392 AK300618 AF112227 BC006088 TSC_hg19_v1_chr20_-_43150672	46354	-	TSC_hg19_v1_chr20_-_43150683 AF153979 U49188 AK222923	46400	-	HQ692860|HNF4A|3172|hepatocyte nuclear factor 4, alpha##HQ692869|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X76930|HNF4A|3172|hepatocyte nuclear factor 4, alpha##AB307703|HNF4A|3172|hepatocyte nuclear factor 4, alpha##BC137539|HNF4A|3172|hepatocyte nuclear factor 4, alpha##BC137540|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87872|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87870|HNF4A|3172|hepatocyte nuclear factor 4, alpha##X87871|HNF4A|3172|hepatocyte nuclear factor 4, alpha##BC003071|TTPAL|79183|tocopherol (alpha) transfer protein-like##NM_001039199|TTPAL|79183|tocopherol (alpha) transfer protein-like##NM_024331|TTPAL|79183|tocopherol (alpha) transfer protein-like##AK314045|TTPAL|79183|tocopherol (alpha) transfer protein-like##CR936621|TTPAL|79183|tocopherol (alpha) transfer protein-like##DQ896714|SERINC3|10955|serine incorporator 3##DQ893392|SERINC3|10955|serine incorporator 3##AK300618|SERINC3|10955|serine incorporator 3##AF112227|SERINC3|10955|serine incorporator 3##BC006088|SERINC3|10955|serine incorporator 3##AF153979|SERINC3|10955|serine incorporator 3##U49188|SERINC3|10955|serine incorporator 3##AK222923|SERINC3|10955|serine incorporator 3	0.0	
chr7	120803914	120804050	reg1028085.p1	4.270	+	AK025639 AK225313 TSC_hg19_v1_chr7_+_120702920	-101109	+	NM_001105533	-174538	+	TSC_hg19_v1_chr7_+_120628867 AL832638	-175086	+	AF152584 NM_016087	161438	+	AF169963 NM_057168	165107	+	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	232355	-	AK025639|C7orf58|79974|chromosome 7 open reading frame 58##AK225313|C7orf58|79974|chromosome 7 open reading frame 58##NM_001105533|C7orf58|79974|chromosome 7 open reading frame 58##AL832638|C7orf58|79974|chromosome 7 open reading frame 58##AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C	0.958125	CTCF.p2:-14:0.958
chr7	147781174	147781248	reg1004948.p1	4.270	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-1967327	+	NM_014141	-1967759	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-3248075	-	TSC_hg19_v1_chr7_+_148036552 CR933671	255354	+	BC021251 NM_145304	506445	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	614729	+	AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##CR933671|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1	0.0	
chr8	125574214	125574332	reg1027845.p1	4.270	+	NM_005005 AF261090 TSC_hg19_v1_chr8_+_125551363 AF044956 AF067168 AK026538 AL136714 BC007672 AK302286 AK313432 AB463917	-22889	+	TSC_hg19_v1_chr8_-_125551327 AF212250 BC064964 AY071865 AK312204 BC007066 NM_001146160 NM_032026	-22966	-	TSC_hg19_v1_chr8_+_125487193 AK001602 AB464690 CU692372	-87002	+	TSC_hg19_v1_chr8_-_125579395 AK126989	5133	-	AF116674 TSC_hg19_v1_chr8_-_125580771	6488	-	TSC_hg19_v1_chr8_-_125716430 U50573	142159	-	NM_005005|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF261090|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF044956|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF067168|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AK026538|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AL136714|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##BC007672|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AK313432|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF212250|TATDN1|83940|TatD DNase domain containing 1##BC064964|TATDN1|83940|TatD DNase domain containing 1##AY071865|TATDN1|83940|TatD DNase domain containing 1##AK312204|TATDN1|83940|TatD DNase domain containing 1##BC007066|TATDN1|83940|TatD DNase domain containing 1##NM_001146160|TATDN1|83940|TatD DNase domain containing 1##NM_032026|TATDN1|83940|TatD DNase domain containing 1##AK001602|RNF139|11236|ring finger protein 139##AK126989|MTSS1|9788|metastasis suppressor 1##AF116674|MTSS1|9788|metastasis suppressor 1##U50573|MTSS1|9788|metastasis suppressor 1	0.821834	CTCF.p2:-21:0.822
chr1	160675616	160675693	reg1028850.p2	4.269	+	AK314244 NM_003037 BC012602	-58591	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	-126366	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	-126407	-	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	5932	-	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	33410	+	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	90344	+	AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9	0.897599	CTCF.p2:-11:0.898
chr2	127822210	127822351	reg1024006.p1	4.269	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-408488	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-408573	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-3039416	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	42461	-	BC039307 NM_001001665	141062	-	AK131190 TSC_hg19_v1_chr2_-_127977781	155437	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.853384	CTCF.p2:-101:0.853
chr2	54823214	54823394	reg1034941.p2	4.269	+	TSC_hg19_v1_chr2_+_54785519 AF327441 NM_178313 BC137282 BC137283	-37739	+	TSC_hg19_v1_chr2_+_54684338 BC032061	-138937	+	TSC_hg19_v1_chr2_+_54683463 NM_003128 AB371586 AB209748	-139692	+	NM_001039753	128844	+	TSC_hg19_v1_chr2_-_55199899 BC131571	376604	-	AJ251385 AM392753 AM393122 AM393280 AM393537 BC139928 DQ778739 AF087901 BC014366 TSC_hg19_v1_chr2_-_55237387 BC007109 AF177332 AF132048 BC001035 AF077050 AF125103 NM_007008 AY102276	414068	-	AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_001039753|EML6|400954|echinoderm microtubule associated protein like 6##AJ251385|RTN4|57142|reticulon 4##AM392753|RTN4|57142|reticulon 4##AM393122|RTN4|57142|reticulon 4##AM393280|RTN4|57142|reticulon 4##AM393537|RTN4|57142|reticulon 4##BC139928|RTN4|57142|reticulon 4##DQ778739|RTN4|57142|reticulon 4##AF087901|RTN4|57142|reticulon 4##BC014366|RTN4|57142|reticulon 4##BC007109|RTN4|57142|reticulon 4##AF177332|RTN4|57142|reticulon 4##AF132048|RTN4|57142|reticulon 4##BC001035|RTN4|57142|reticulon 4##AF077050|RTN4|57142|reticulon 4##AF125103|RTN4|57142|reticulon 4##NM_007008|RTN4|57142|reticulon 4##AY102276|RTN4|57142|reticulon 4	0.909756	CTCF.p2:-74:0.910
chr3	9972797	9972921	reg1034235.p1	4.269	+	NM_001203263 NM_001203264 NM_001203265 NM_032732 NM_153460 AK092907 AK290670 AK294616 AK295377 AK315024 AX747801 AY359098 NM_153461 AK075534 AK096824 AK308241 AF458065 BC006411 AK225650 AY358840 AK315053 AK303171 EF676032	-14058	+	AF458069 AY358451 NM_001193380 NM_153480 BC063110 TSC_hg19_v1_chr3_+_9944533 AK074238 AK096801 AK298025 AK096793 AK314476 AK297697	-28315	+	NM_153483 BC035478 BC137077 BC137078	-28536	+	TSC_hg19_v1_chr3_+_9975538 AL050275 NM_015513 NM_001031717 NM_001077415 BC008720 AY358363 AK314113	2687	+	BC089447 AK296317 TSC_hg19_v1_chr3_-_9994093 AY358158 AK090993 AX746722 BC040508 NM_207351	21219	-	CU692722 TSC_hg19_v1_chr3_-_10028505 BC022807	55566	-	NM_001203263|IL17RC|84818|interleukin 17 receptor C##NM_001203264|IL17RC|84818|interleukin 17 receptor C##NM_001203265|IL17RC|84818|interleukin 17 receptor C##NM_032732|IL17RC|84818|interleukin 17 receptor C##NM_153460|IL17RC|84818|interleukin 17 receptor C##AK092907|IL17RC|84818|interleukin 17 receptor C##AK290670|IL17RC|84818|interleukin 17 receptor C##AK294616|IL17RC|84818|interleukin 17 receptor C##AK295377|IL17RC|84818|interleukin 17 receptor C##AK315024|IL17RC|84818|interleukin 17 receptor C##AY359098|IL17RC|84818|interleukin 17 receptor C##NM_153461|IL17RC|84818|interleukin 17 receptor C##AK075534|IL17RC|84818|interleukin 17 receptor C##AK096824|IL17RC|84818|interleukin 17 receptor C##AK308241|IL17RC|84818|interleukin 17 receptor C##AF458065|IL17RC|84818|interleukin 17 receptor C##BC006411|IL17RC|84818|interleukin 17 receptor C##AK225650|IL17RC|84818|interleukin 17 receptor C##AY358840|IL17RC|84818|interleukin 17 receptor C##AK315053|IL17RC|84818|interleukin 17 receptor C##AK303171|IL17RC|84818|interleukin 17 receptor C##EF676032|IL17RC|84818|interleukin 17 receptor C##AF458069|IL17RE|132014|interleukin 17 receptor E##AY358451|IL17RE|132014|interleukin 17 receptor E##NM_001193380|IL17RE|132014|interleukin 17 receptor E##NM_153480|IL17RE|132014|interleukin 17 receptor E##BC063110|IL17RE|132014|interleukin 17 receptor E##AK074238|IL17RE|132014|interleukin 17 receptor E##AK096801|IL17RE|132014|interleukin 17 receptor E##AK298025|IL17RE|132014|interleukin 17 receptor E##AK096793|IL17RE|132014|interleukin 17 receptor E##AK314476|IL17RE|132014|interleukin 17 receptor E##AK297697|IL17RE|132014|interleukin 17 receptor E##NM_153483|IL17RE|132014|interleukin 17 receptor E##BC035478|IL17RE|132014|interleukin 17 receptor E##BC137077|IL17RE|132014|interleukin 17 receptor E##BC137078|IL17RE|132014|interleukin 17 receptor E##AL050275|CRELD1|78987|cysteine-rich with EGF-like domains 1##NM_015513|CRELD1|78987|cysteine-rich with EGF-like domains 1##NM_001031717|CRELD1|78987|cysteine-rich with EGF-like domains 1##NM_001077415|CRELD1|78987|cysteine-rich with EGF-like domains 1##BC008720|CRELD1|78987|cysteine-rich with EGF-like domains 1##AY358363|CRELD1|78987|cysteine-rich with EGF-like domains 1##AK314113|CRELD1|78987|cysteine-rich with EGF-like domains 1##BC089447|PRRT3|285368|proline-rich transmembrane protein 3##AY358158|PRRT3|285368|proline-rich transmembrane protein 3##AK090993|PRRT3|285368|proline-rich transmembrane protein 3##BC040508|PRRT3|285368|proline-rich transmembrane protein 3##NM_207351|PRRT3|285368|proline-rich transmembrane protein 3##BC022807|TMEM111|55831|transmembrane protein 111	0.01409	
chr4	99034305	99034403	reg1030613.p1	4.269	+	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	-2273096	+	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	-2563978	-	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	-2564175	-	CU691442 BC036870 NM_174952	29991	-	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	148240	+	TSC_hg19_v1_chr4_-_99579781 BC009704 AF065389 AK315723 NM_005723	545405	-	NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC009704|TSPAN5|10098|tetraspanin 5##AF065389|TSPAN5|10098|tetraspanin 5##AK315723|TSPAN5|10098|tetraspanin 5##NM_005723|TSPAN5|10098|tetraspanin 5	0.822381	CTCF.p2:2:0.822
chr6	112085536	112085681	reg1031148.p1	4.269	+	BC032496 NM_153048	-5300	-	AB451293 AB451426 AB528738 CU689398 S74774 NM_153047	-44350	-	NM_001164281 NM_147686	-158135	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	108927	-	TSC_hg19_v1_chr6_-_112194648 NM_002037	109047	-	BC012028 NM_003880 BC035250 NM_198239 BC105940 BC105941 AY358349 AF100781 AY358350 AB075040	289809	+	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##AB451293|FYN|2534|FYN oncogene related to SRC, FGR, YES##AB451426|FYN|2534|FYN oncogene related to SRC, FGR, YES##S74774|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153047|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_001164281|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_147686|TRAF3IP2|10758|TRAF3 interacting protein 2##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_002037|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3##AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3	0.0	
chr8	145329421	145329528	reg1030794.p2	4.269	+	AX721087 NM_001008271 NM_001080514	-7985	+	AK295740 NM_001099280 NM_001099281 NM_032450 AK093563 AX748203 BC057824 BC067855 BC092486	-126546	+	BC003035 BC009915 NM_016458 AK098226 BC015471	-136779	+	BC003035 BC009915 NM_016458 AK098226 BC015471	108429	+	AX721087 NM_001008271 NM_001080514	161101	+	BC007274 TSC_hg19_v1_chr8_-_145515060 DQ896815 EU176248	185563	-	NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##AK295740|HEATR7A|727957|HEAT repeat containing 7A##NM_001099280|HEATR7A|727957|HEAT repeat containing 7A##NM_001099281|HEATR7A|727957|HEAT repeat containing 7A##NM_032450|HEATR7A|727957|HEAT repeat containing 7A##AK093563|HEATR7A|727957|HEAT repeat containing 7A##BC057824|HEATR7A|727957|HEAT repeat containing 7A##BC067855|HEATR7A|727957|HEAT repeat containing 7A##BC092486|HEATR7A|727957|HEAT repeat containing 7A##BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##BC003035|FAM203A|51236|family with sequence similarity 203, member A##BC009915|FAM203A|51236|family with sequence similarity 203, member A##NM_016458|FAM203A|51236|family with sequence similarity 203, member A##AK098226|FAM203A|51236|family with sequence similarity 203, member A##BC015471|FAM203A|51236|family with sequence similarity 203, member A##NM_001008271|SCXA|100129885|scleraxis homolog A (mouse)##NM_001080514|SCXB|642658|scleraxis homolog B (mouse)##BC007274|BOP1|23246|block of proliferation 1##DQ896815|BOP1|23246|block of proliferation 1##EU176248|BOP1|23246|block of proliferation 1	0.041669	
chr13	30945825	30946006	reg1027159.p1	4.268	+	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-64346	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	-64764	-	TSC_hg19_v1_chr13_-_30424811 NM_007106	-521074	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	94078	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	94143	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	245712	-	AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##NM_007106|UBL3|5412|ubiquitin-like 3##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1	0.0	
chr14	66198924	66199030	reg1036029.p2	4.268	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-319252	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-319489	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-319651	-	AB037806 AF272663 NM_001024218 NM_020806	775147	+	TSC_hg19_v1_chr14_+_66974859 AK025169	775876	+	TSC_hg19_v1_chr14_+_66974870 AK315569	775892	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.0	
chr5	81645620	81645736	reg1029857.p2	4.268	+	BC093982 BC112191 NM_001017971	-44513	+	TSC_hg19_v1_chr5_-_81574219 NM_001025	-71459	-	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	-71507	-	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	727519	-	TSC_hg19_v1_chr5_-_82373255 NM_174909	727584	-	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	727705	+	BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001025|RPS23|6228|ribosomal protein S23##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##NM_174909|TMEM167A|153339|transmembrane protein 167A##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4	0.809298	CTCF.p2:-4:0.809
chr9	132331968	132332090	reg1030087.p2	4.268	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	-80588	+	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	-80675	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-248734	+	BC112353 AK093122 AX747938 NM_199350	51008	-	TSC_hg19_v1_chr9_+_132388441 NM_014064 AK290957 AK292332 AK298840 AK307056 AK313829	56396	+	TSC_hg19_v1_chr9_+_132388461 BC001396 BC033234 AF110776	56441	+	BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50##NM_014064|METTL11A|28989|methyltransferase like 11A##AK290957|METTL11A|28989|methyltransferase like 11A##AK292332|METTL11A|28989|methyltransferase like 11A##AK298840|METTL11A|28989|methyltransferase like 11A##AK307056|METTL11A|28989|methyltransferase like 11A##AK313829|METTL11A|28989|methyltransferase like 11A##BC001396|METTL11A|28989|methyltransferase like 11A##BC033234|METTL11A|28989|methyltransferase like 11A##AF110776|METTL11A|28989|methyltransferase like 11A	0.0	
chr1	54842334	54842514	reg1028008.p2	4.267	+	TSC_hg19_v1_chr1_+_54665866 AF151069 AF325707 AY421759 BC000041 CU674006	-176534	+	TSC_hg19_v1_chr1_+_54665855 AK026171	-176571	+	AK024572 NM_016491 TSC_hg19_v1_chr1_+_54665839	-176582	+	CU688156 AK289474 BC003605 BC127866 BC066365 TSC_hg19_v1_chr1_-_54871828 AF500116	29364	-	NM_018070 NM_145716 TSC_hg19_v1_chr1_-_54872066	29598	-	TSC_hg19_v1_chr1_-_54872087 NM_001009955	29660	-	AF151069|MRPL37|51253|mitochondrial ribosomal protein L37##AF325707|MRPL37|51253|mitochondrial ribosomal protein L37##AY421759|MRPL37|51253|mitochondrial ribosomal protein L37##BC000041|MRPL37|51253|mitochondrial ribosomal protein L37##AK026171|MRPL37|51253|mitochondrial ribosomal protein L37##AK024572|MRPL37|51253|mitochondrial ribosomal protein L37##NM_016491|MRPL37|51253|mitochondrial ribosomal protein L37##AK289474|SSBP3|23648|single stranded DNA binding protein 3##BC003605|SSBP3|23648|single stranded DNA binding protein 3##BC066365|SSBP3|23648|single stranded DNA binding protein 3##AF500116|SSBP3|23648|single stranded DNA binding protein 3##NM_018070|SSBP3|23648|single stranded DNA binding protein 3##NM_145716|SSBP3|23648|single stranded DNA binding protein 3##NM_001009955|SSBP3|23648|single stranded DNA binding protein 3	0.0	
chr16	31171145	31171245	reg1024424.p1	4.267	+	BC137396 BC144615 AJ627034 AK075142 AK301409 AK290310 NM_173502	-9798	-	TSC_hg19_v1_chr16_-_31160884 AK297997	-10336	-	TSC_hg19_v1_chr16_-_31147088 NM_002773	-24089	-	NM_001170634 NM_001170937 NM_004960 TSC_hg19_v1_chr16_+_31191456	20248	+	AK130774 S62138 S62140 TSC_hg19_v1_chr16_+_31191459 AK098774 AK290936 AK301110	20263	+	AK299129 TSC_hg19_v1_chr16_+_31191461	20266	+	BC137396|PRSS36|146547|protease, serine, 36##BC144615|PRSS36|146547|protease, serine, 36##AJ627034|PRSS36|146547|protease, serine, 36##AK075142|PRSS36|146547|protease, serine, 36##AK301409|PRSS36|146547|protease, serine, 36##AK290310|PRSS36|146547|protease, serine, 36##NM_173502|PRSS36|146547|protease, serine, 36##AK297997|PRSS36|146547|protease, serine, 36##NM_002773|PRSS8|5652|protease, serine, 8##NM_001170634|FUS|2521|fused in sarcoma##NM_001170937|FUS|2521|fused in sarcoma##NM_004960|FUS|2521|fused in sarcoma##AK130774|FUS|2521|fused in sarcoma##S62140|FUS|2521|fused in sarcoma##AK098774|FUS|2521|fused in sarcoma##AK290936|FUS|2521|fused in sarcoma##AK301110|FUS|2521|fused in sarcoma##AK299129|FUS|2521|fused in sarcoma	0.759967	CTCF.p2:-15:0.760
chr21	33468934	33469042	reg1031074.p1	4.267	+	TSC_hg19_v1_chr21_+_33245863 AJ271722 NM_014586	-223268	+	TSC_hg19_v1_chr21_-_33104407 BC014921 NM_001145444 NM_001145445 NM_020706	-364552	-	BC043353 TSC_hg19_v1_chr21_-_33104396	-364595	-	CU692128 TSC_hg19_v1_chr21_-_33651338 AF387845 AF231921 AK075281 BC042917 NM_018944 AK312073	182407	-	AF454915 AF454916 NM_178817 NM_206898	195135	+	AF231919 TSC_hg19_v1_chr21_-_33765328 NM_014825	296268	-	AJ271722|HUNK|30811|hormonally up-regulated Neu-associated kinase##NM_014586|HUNK|30811|hormonally up-regulated Neu-associated kinase##BC014921|SCAF4|57466|SR-related CTD-associated factor 4##NM_001145444|SCAF4|57466|SR-related CTD-associated factor 4##NM_001145445|SCAF4|57466|SR-related CTD-associated factor 4##NM_020706|SCAF4|57466|SR-related CTD-associated factor 4##BC043353|SCAF4|57466|SR-related CTD-associated factor 4##AF387845|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AF231921|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AK075281|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##BC042917|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##NM_018944|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AK312073|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AF454915|MRAP|56246|melanocortin 2 receptor accessory protein##AF454916|MRAP|56246|melanocortin 2 receptor accessory protein##NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein##NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein##AF231919|URB1|9875|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)##NM_014825|URB1|9875|URB1 ribosome biogenesis 1 homolog (S. cerevisiae)	0.101256	
chr22	42315276	42315432	reg1034027.p1	4.267	+	NM_001207020	-4684	-	TSC_hg19_v1_chr22_+_42229269 CU013184 CU013472 AB463291	-86083	+	TSC_hg19_v1_chr22_+_42229253 BC056158 U02031 BC051385 CT841522 AK299914	-86153	+	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	7445	-	EU035297 NM_001110215	20868	-	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	27769	-	NM_001207020|SHISA8|440829|shisa homolog 8 (Xenopus laevis)##CU013184|SREBF2|6721|sterol regulatory element binding transcription factor 2##CU013472|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC056158|SREBF2|6721|sterol regulatory element binding transcription factor 2##U02031|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051385|SREBF2|6721|sterol regulatory element binding transcription factor 2##CT841522|SREBF2|6721|sterol regulatory element binding transcription factor 2##AK299914|SREBF2|6721|sterol regulatory element binding transcription factor 2##AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M	0.0	
chr3	149198112	149198293	reg1001136.p1	4.267	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-5713	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-5800	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-102660	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	177533	-	AK022036 NM_001168278	222857	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	272037	-	AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2	0.0	
chr6	111927103	111927283	reg1032029.p2	4.267	+	TSC_hg19_v1_chr6_-_111927082 AL050289 AK310141 AF136406 AF136407	-21	-	BC002823 AF085921 AF136405 TSC_hg19_v1_chr6_-_111927072 AK310922 AK025351 AK314415	-126	-	NM_001164282	-32296	-	NM_001164281 NM_147686	280	-	AB451293 AB451426 AB528738 CU689398 S74774 NM_153047	114065	-	BC032496 NM_153048	153115	-	AL050289|TRAF3IP2|10758|TRAF3 interacting protein 2##AK310141|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136406|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136407|TRAF3IP2|10758|TRAF3 interacting protein 2##BC002823|TRAF3IP2|10758|TRAF3 interacting protein 2##AF085921|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136405|TRAF3IP2|10758|TRAF3 interacting protein 2##AK310922|TRAF3IP2|10758|TRAF3 interacting protein 2##AK025351|TRAF3IP2|10758|TRAF3 interacting protein 2##AK314415|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_001164282|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_001164281|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_147686|TRAF3IP2|10758|TRAF3 interacting protein 2##AB451293|FYN|2534|FYN oncogene related to SRC, FGR, YES##AB451426|FYN|2534|FYN oncogene related to SRC, FGR, YES##S74774|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153047|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES	0.048793	
chrX	47420651	47420736	reg1025839.p1	4.267	+	NM_001654 X04790 TSC_hg19_v1_chrX_+_47420605 AB208831 AK300975 AK130043 AK297453 AK307747 BC002466 BC007514	-126	+	BC015023 NM_007130 NM_153380	-78349	-	U28687 NM_003446 BC075003 AB528013 EU446919	-190670	+	TSC_hg19_v1_chrX_+_47441773 NM_003254 AK074854 AK296116 BC000866 BC007097	21030	+	TSC_hg19_v1_chrX_+_47441834 X03124 M12670 AK310206 AK311937 AK307222 M59906 X02598	21130	+	TSC_hg19_v1_chrX_-_47479098 AB591026	58419	-	NM_001654|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##X04790|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AB208831|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK300975|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK130043|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK297453|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK307747|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC002466|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC007514|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC015023|ZNF41|7592|zinc finger protein 41##NM_007130|ZNF41|7592|zinc finger protein 41##NM_153380|ZNF41|7592|zinc finger protein 41##U28687|ZNF157|7712|zinc finger protein 157##NM_003446|ZNF157|7712|zinc finger protein 157##BC075003|ZNF157|7712|zinc finger protein 157##EU446919|ZNF157|7712|zinc finger protein 157##NM_003254|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK074854|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK296116|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC000866|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC007097|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X03124|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M12670|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK310206|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK311937|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M59906|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X02598|TIMP1|7076|TIMP metallopeptidase inhibitor 1	0.0	
chr11	41634046	41634215	reg1034221.p1	4.266	+	AB046800 NM_020929	-1318467	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-1319536	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-5014328	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	1699388	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	1699434	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	1699510	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.089953	
chr1	2344307	2344404	reg1032239.p2	4.266	+	TSC_hg19_v1_chr1_-_2344008 AB013818 NM_002617 NM_153818	-343	-	CR542077 DQ891961 DQ895151 TSC_hg19_v1_chr1_-_2343983 BC000543 AF060502 AK124816 BC018198	-387	-	TSC_hg19_v1_chr1_+_2323292 AF091071	-21045	+	DQ176850 NM_014638 BC144620	63402	+	TSC_hg19_v1_chr1_-_2458040 AL442072 BC043496 AK001644 AK223546 AK303127 AK309860 NM_018216 AK295301	113709	-	BC087840 DQ272660 NM_001010926	117328	-	AB013818|PEX10|5192|peroxisomal biogenesis factor 10##NM_002617|PEX10|5192|peroxisomal biogenesis factor 10##NM_153818|PEX10|5192|peroxisomal biogenesis factor 10##CR542077|PEX10|5192|peroxisomal biogenesis factor 10##DQ891961|PEX10|5192|peroxisomal biogenesis factor 10##DQ895151|PEX10|5192|peroxisomal biogenesis factor 10##BC000543|PEX10|5192|peroxisomal biogenesis factor 10##AF060502|PEX10|5192|peroxisomal biogenesis factor 10##AK124816|PEX10|5192|peroxisomal biogenesis factor 10##BC018198|PEX10|5192|peroxisomal biogenesis factor 10##AF091071|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##DQ176850|PLCH2|9651|phospholipase C, eta 2##NM_014638|PLCH2|9651|phospholipase C, eta 2##BC144620|PLCH2|9651|phospholipase C, eta 2##AL442072|PANK4|55229|pantothenate kinase 4##BC043496|PANK4|55229|pantothenate kinase 4##AK001644|PANK4|55229|pantothenate kinase 4##AK223546|PANK4|55229|pantothenate kinase 4##AK303127|PANK4|55229|pantothenate kinase 4##AK309860|PANK4|55229|pantothenate kinase 4##NM_018216|PANK4|55229|pantothenate kinase 4##AK295301|PANK4|55229|pantothenate kinase 4##BC087840|HES5|388585|hairy and enhancer of split 5 (Drosophila)##DQ272660|HES5|388585|hairy and enhancer of split 5 (Drosophila)##NM_001010926|HES5|388585|hairy and enhancer of split 5 (Drosophila)	0.0	
chr19	48774399	48774498	reg1018871.p1	4.266	+	TSC_hg19_v1_chr19_-_48759141 BC056891 BC034564 BC046136 NM_001184902 NM_001184904	-15277	-	AK125548 TSC_hg19_v1_chr19_+_48758936 BC060888 BC008448 BC033836	-15499	+	AB023172 AF322184 AF511652 TSC_hg19_v1_chr19_-_48753084 BC041697 BC045539 AK302327 AK311079 AK297045 BX648568 AK297069 NM_001184901 NM_001184903 NM_014959	-21424	-	AK075062 NM_153608	205	+	BC007730 NM_144577	48883	-	TSC_hg19_v1_chr19_-_48825152 AK128144	50722	-	BC056891|CARD8|22900|caspase recruitment domain family, member 8##BC034564|CARD8|22900|caspase recruitment domain family, member 8##BC046136|CARD8|22900|caspase recruitment domain family, member 8##NM_001184902|CARD8|22900|caspase recruitment domain family, member 8##NM_001184904|CARD8|22900|caspase recruitment domain family, member 8##AK125548|LOC100505812|100505812|uncharacterized LOC100505812##BC060888|LOC100505812|100505812|uncharacterized LOC100505812##AB023172|CARD8|22900|caspase recruitment domain family, member 8##AF322184|CARD8|22900|caspase recruitment domain family, member 8##AF511652|CARD8|22900|caspase recruitment domain family, member 8##BC041697|CARD8|22900|caspase recruitment domain family, member 8##BC045539|CARD8|22900|caspase recruitment domain family, member 8##AK302327|CARD8|22900|caspase recruitment domain family, member 8##AK311079|CARD8|22900|caspase recruitment domain family, member 8##AK297045|CARD8|22900|caspase recruitment domain family, member 8##BX648568|CARD8|22900|caspase recruitment domain family, member 8##AK297069|CARD8|22900|caspase recruitment domain family, member 8##NM_001184901|CARD8|22900|caspase recruitment domain family, member 8##NM_001184903|CARD8|22900|caspase recruitment domain family, member 8##NM_014959|CARD8|22900|caspase recruitment domain family, member 8##AK075062|ZNF114|163071|zinc finger protein 114##NM_153608|ZNF114|163071|zinc finger protein 114##BC007730|CCDC114|93233|coiled-coil domain containing 114##NM_144577|CCDC114|93233|coiled-coil domain containing 114##AK128144|CCDC114|93233|coiled-coil domain containing 114	0.0	
chr2	202209846	202209966	reg1033033.p2	4.266	+	NM_033356 X98173	-84650	+	NM_001080125 AF422926 BC068050 AF422925 AF422929 X98172 AY429525	-87109	+	NM_001080124 NM_001228 NM_033355 NM_033358 AF422927 AF422928 BC010390 AK310630 BC017031 U60520 X98176	-111681	+	AK124115 BC031603 NM_001127391 NM_139163 AK292283	12187	-	TSC_hg19_v1_chr2_-_202316179 AK314384 AK054763	106241	-	TSC_hg19_v1_chr2_-_202316274 AB038951 BC040668 BC041330 BC048093 NM_015049 AL832573	106382	-	NM_033356|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98173|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001080125|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422926|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC068050|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422929|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98172|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001080124|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001228|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033355|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033358|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422927|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422928|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC010390|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310630|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC017031|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##U60520|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98176|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK124115|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##BC031603|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_001127391|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_139163|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##AK292283|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##AK314384|TRAK2|66008|trafficking protein, kinesin binding 2##AK054763|TRAK2|66008|trafficking protein, kinesin binding 2##AB038951|TRAK2|66008|trafficking protein, kinesin binding 2##BC040668|TRAK2|66008|trafficking protein, kinesin binding 2##BC041330|TRAK2|66008|trafficking protein, kinesin binding 2##BC048093|TRAK2|66008|trafficking protein, kinesin binding 2##NM_015049|TRAK2|66008|trafficking protein, kinesin binding 2##AL832573|TRAK2|66008|trafficking protein, kinesin binding 2	0.659674	CTCF.p2:12:0.643
chr6	43179890	43180016	reg1035893.p1	4.266	+	TSC_hg19_v1_chr6_+_43149926 BC028159	-30016	+	TSC_hg19_v1_chr6_+_43149918 AK125228 CR749511 NM_015089 CR749841	-30039	+	TSC_hg19_v1_chr6_+_43139204 AB209128 AB464198	-40660	+	TSC_hg19_v1_chr6_-_43197220 BC011683 AF040105 NM_006443 NM_199184 EU585603	17246	-	NM_032538 TSC_hg19_v1_chr6_+_43211227	31275	+	TSC_hg19_v1_chr6_+_43265994 NM_006672 NM_153320 AF097518	86044	+	BC028159|CUL9|23113|cullin 9##AK125228|CUL9|23113|cullin 9##CR749511|CUL9|23113|cullin 9##NM_015089|CUL9|23113|cullin 9##CR749841|CUL9|23113|cullin 9##AB209128|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC011683|C6orf108|10591|chromosome 6 open reading frame 108##AF040105|C6orf108|10591|chromosome 6 open reading frame 108##NM_006443|C6orf108|10591|chromosome 6 open reading frame 108##NM_199184|C6orf108|10591|chromosome 6 open reading frame 108##EU585603|C6orf108|10591|chromosome 6 open reading frame 108##NM_032538|TTBK1|84630|tau tubulin kinase 1##NM_006672|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_153320|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF097518|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7	0.260442	
chr8	145055675	145055791	reg1033944.p1	4.266	+	TSC_hg19_v1_chr8_-_145050917 U53204 NM_000445	-4806	-	AY480045 NM_201378 TSC_hg19_v1_chr8_-_145047698	-8064	-	TSC_hg19_v1_chr8_-_145028003 AY480046 NM_201379	-27702	-	AK303317 TSC_hg19_v1_chr8_-_145060590 AK128537 BC132961 BC136542 BC144235	4844	-	AK027370 TSC_hg19_v1_chr8_-_145060609 AK309251 BC030549 BC020378 AK222914 AK308657 NM_032789	4881	-	BC035485 TSC_hg19_v1_chr8_-_145064214	8442	-	U53204|PLEC|5339|plectin##NM_000445|PLEC|5339|plectin##AY480045|PLEC|5339|plectin##NM_201378|PLEC|5339|plectin##AY480046|PLEC|5339|plectin##NM_201379|PLEC|5339|plectin##AK303317|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK128537|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC132961|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC136542|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC144235|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK027370|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK309251|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC030549|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC020378|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK222914|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##AK308657|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##NM_032789|PARP10|84875|poly (ADP-ribose) polymerase family, member 10##BC035485|PARP10|84875|poly (ADP-ribose) polymerase family, member 10	0.0	
chrX	134792236	134792306	reg1030478.p2	4.266	+	TSC_hg19_v1_chrX_+_134654737 BC140715 AK308423	-137540	+	TSC_hg19_v1_chrX_+_134654584 BX648113 NM_182540 AK096544 AL833319	-137702	+	BC030620 TSC_hg19_v1_chrX_+_134555878 BC051704	-236397	+	AY743709 NM_001017417 BC140735 BC140926 BC144437 BC140913	54963	+	AK098689 AY743710 AY743712 NM_001017436 NM_152582 BC028711 BC140735 BC140926 BC144437	73988	+	AY743711 NM_001017435 BC028711 BC140735 BC140926 BC144437	91262	+	BC140715|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK308423|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BX648113|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##NM_182540|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK096544|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AL833319|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BC030620|LINC00086|399668|long intergenic non-protein coding RNA 86##BC051704|LINC00086|399668|long intergenic non-protein coding RNA 86##AY743709|CT45A1|541466|cancer/testis antigen family 45, member A1##NM_001017417|CT45A1|541466|cancer/testis antigen family 45, member A1##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1##AK098689|CT45A4|441520|cancer/testis antigen family 45, member A4##AY743710|CT45A2|728911|cancer/testis antigen family 45, member A2##AY743712|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_001017436|CT45A4|441520|cancer/testis antigen family 45, member A4##NM_152582|CT45A2|728911|cancer/testis antigen family 45, member A2##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##AY743711|CT45A3|441519|cancer/testis antigen family 45, member A3##NM_001017435|CT45A3|441519|cancer/testis antigen family 45, member A3##BC028711|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3	0.0	
chrX	23336196	23336345	reg1009897.p1	4.266	+	AY039237 NM_182699 BC067878 BC051703	-318186	+	GQ355336 NM_152577 AK098601 BC074910 BC126190 BC126192 HQ258412 HQ258552	-1045202	+	NM_000444 U87284 AD000712 AK298030 BC105057 BC105059 U75645 U60475	-1285245	+	AK298796 NM_173495 AK054858 BC121061	16790	+	TSC_hg19_v1_chrX_+_23685615 BC016770	349353	+	TSC_hg19_v1_chrX_+_23685640 BC007107 NM_006406 U25182	349376	+	AY039237|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##NM_182699|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC067878|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##BC051703|DDX53|168400|DEAD (Asp-Glu-Ala-Asp) box polypeptide 53##GQ355336|ZNF645|158506|zinc finger protein 645##NM_152577|ZNF645|158506|zinc finger protein 645##AK098601|ZNF645|158506|zinc finger protein 645##BC074910|ZNF645|158506|zinc finger protein 645##BC126190|ZNF645|158506|zinc finger protein 645##BC126192|ZNF645|158506|zinc finger protein 645##HQ258412|ZNF645|158506|zinc finger protein 645##HQ258552|ZNF645|158506|zinc finger protein 645##NM_000444|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U87284|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AD000712|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AK298030|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105057|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##BC105059|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U75645|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##U60475|PHEX|5251|phosphate regulating endopeptidase homolog, X-linked##AK298796|PTCHD1|139411|patched domain containing 1##NM_173495|PTCHD1|139411|patched domain containing 1##AK054858|PTCHD1|139411|patched domain containing 1##BC121061|PTCHD1|139411|patched domain containing 1##BC016770|PRDX4|10549|peroxiredoxin 4##BC007107|PRDX4|10549|peroxiredoxin 4##NM_006406|PRDX4|10549|peroxiredoxin 4##U25182|PRDX4|10549|peroxiredoxin 4	0.0	
chr1	179568896	179569017	reg1031439.p2	4.265	+	NM_001199089 AK127370 BC130532 BC144058	-7950	+	AK126889 NM_001199091 NM_001199085 NM_173533	-8205	+	AJ279254 NM_014625 BC029141	-23880	-	AK092142 AX747378 NM_001199092	6405	+	AY902195 BC009382 NM_173509 TSC_hg19_v1_chr1_+_179712397	143395	+	TSC_hg19_v1_chr1_+_179712425 AK310711	143468	+	NM_001199089|TDRD5|163589|tudor domain containing 5##AK127370|TDRD5|163589|tudor domain containing 5##BC130532|TDRD5|163589|tudor domain containing 5##BC144058|TDRD5|163589|tudor domain containing 5##AK126889|TDRD5|163589|tudor domain containing 5##NM_001199091|TDRD5|163589|tudor domain containing 5##NM_001199085|TDRD5|163589|tudor domain containing 5##NM_173533|TDRD5|163589|tudor domain containing 5##AJ279254|NPHS2|7827|nephrosis 2, idiopathic, steroid-resistant (podocin)##NM_014625|NPHS2|7827|nephrosis 2, idiopathic, steroid-resistant (podocin)##BC029141|NPHS2|7827|nephrosis 2, idiopathic, steroid-resistant (podocin)##AK092142|TDRD5|163589|tudor domain containing 5##NM_001199092|TDRD5|163589|tudor domain containing 5##AY902195|FAM163A|148753|family with sequence similarity 163, member A##BC009382|FAM163A|148753|family with sequence similarity 163, member A##NM_173509|FAM163A|148753|family with sequence similarity 163, member A##AK310711|FAM163A|148753|family with sequence similarity 163, member A	0.998363	CTCF.p2:18:0.998
chr12	45651003	45651154	reg1029247.p1	4.265	+	TSC_hg19_v1_chr12_+_45609916 BC098410	-41171	+	TSC_hg19_v1_chr12_+_45609867 AK302819 NM_001142680	-41207	+	TSC_hg19_v1_chr12_+_45609845 AK303996	-41229	+	AL832340 NM_001142678	35387	+	TSC_hg19_v1_chr12_-_46121280 BC037237 BC008245	470195	-	TSC_hg19_v1_chr12_-_46121531 BC047417	470452	-	BC098410|ANO6|196527|anoctamin 6##AK302819|ANO6|196527|anoctamin 6##NM_001142680|ANO6|196527|anoctamin 6##AK303996|ANO6|196527|anoctamin 6##AL832340|ANO6|196527|anoctamin 6##NM_001142678|ANO6|196527|anoctamin 6##BC037237|LOC400027|400027|uncharacterized LOC400027##BC008245|LOC400027|400027|uncharacterized LOC400027##BC047417|LOC400027|400027|uncharacterized LOC400027	0.693773	CTCF.p2:5:0.694
chr17	10020948	10021080	reg1030442.p1	4.265	+	TSC_hg19_v1_chr17_-_9940004 AK057761 BC006454 NM_201432	-80981	-	TSC_hg19_v1_chr17_-_9939883 AK292987	-81136	-	TSC_hg19_v1_chr17_-_9929603 AB007854 AK225165 AK299574 NM_001130831	-91393	-	TSC_hg19_v1_chr17_-_10101924 AY327406 NM_201433	80892	-	AF111782 NM_003802	255307	-	AK303395 NM_002472	304252	-	AK057761|GAS7|8522|growth arrest-specific 7##BC006454|GAS7|8522|growth arrest-specific 7##NM_201432|GAS7|8522|growth arrest-specific 7##AK292987|GAS7|8522|growth arrest-specific 7##AB007854|GAS7|8522|growth arrest-specific 7##AK225165|GAS7|8522|growth arrest-specific 7##AK299574|GAS7|8522|growth arrest-specific 7##NM_001130831|GAS7|8522|growth arrest-specific 7##AY327406|GAS7|8522|growth arrest-specific 7##NM_201433|GAS7|8522|growth arrest-specific 7##AF111782|MYH13|8735|myosin, heavy chain 13, skeletal muscle##NM_003802|MYH13|8735|myosin, heavy chain 13, skeletal muscle##AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	0.013921	
chr17	60730871	60731035	reg1028943.p1	4.265	+	TSC_hg19_v1_chr17_+_60705060 BC150212 AF107292 AB384513	-25846	+	BC146647 TSC_hg19_v1_chr17_+_60705048 AF134838	-25908	+	TSC_hg19_v1_chr17_+_60704751 AB014609 BC153884 NM_006039	-26196	+	NM_001100875 BC035021	153058	-	AK122947 AK093076 AX747906 BX648705 NM_152598	154724	-	NM_025185	355944	+	BC150212|MRC2|9902|mannose receptor, C type 2##AF107292|MRC2|9902|mannose receptor, C type 2##BC146647|MRC2|9902|mannose receptor, C type 2##AF134838|MRC2|9902|mannose receptor, C type 2##AB014609|MRC2|9902|mannose receptor, C type 2##BC153884|MRC2|9902|mannose receptor, C type 2##NM_006039|MRC2|9902|mannose receptor, C type 2##NM_001100875|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC035021|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	0.0	
chr18	49293768	49293948	reg1030314.p2	4.265	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-569818	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-570146	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-570632	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	572683	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	573255	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2397134	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.0	
chr2	209685176	209685272	reg1032861.p2	4.265	+	BC036811 NM_005048 U25128 HQ257935 AY497546	-413563	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-460599	+	TSC_hg19_v1_chr2_+_209131083 AK127769	-554141	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	603530	+	BC110423 TSC_hg19_v1_chr2_+_210444185	758946	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	759170	+	BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##AK294181|PTH2R|5746|parathyroid hormone 2 receptor##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC110423|MAP2|4133|microtubule-associated protein 2##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2	0.12891	
chr9	130628883	130628989	reg1030700.p1	4.265	+	TSC_hg19_v1_chr9_-_130617036 NM_000118 NM_001114753	-11909	-	TSC_hg19_v1_chr9_-_130616968 AK222669 AK302455	-11961	-	TSC_hg19_v1_chr9_-_130616938 BC014271 BC020391 X72012 AK290389 AK300156	-12080	-	BC001116 BC036803 AK313758 TSC_hg19_v1_chr9_-_130639955 BC100022 NM_000476	11044	-	AK300534 TSC_hg19_v1_chr9_-_130659688 AK057100	30692	-	TSC_hg19_v1_chr9_-_130661803 AK226174	32863	-	NM_000118|ENG|2022|endoglin##NM_001114753|ENG|2022|endoglin##AK222669|ENG|2022|endoglin##AK302455|ENG|2022|endoglin##BC014271|ENG|2022|endoglin##BC020391|ENG|2022|endoglin##X72012|ENG|2022|endoglin##AK290389|ENG|2022|endoglin##AK300156|ENG|2022|endoglin##BC001116|AK1|203|adenylate kinase 1##BC036803|AK1|203|adenylate kinase 1##AK313758|AK1|203|adenylate kinase 1##BC100022|AK1|203|adenylate kinase 1##NM_000476|AK1|203|adenylate kinase 1##AK300534|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK057100|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK226174|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	0.0	
chr11	36768531	36768707	reg1000101.p1	4.264	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-148817	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-152515	+	NM_000448 M29474	-179051	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	3545975	-	AB046800 NM_020929	3547044	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	6564899	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.0	
chr19	36618906	36619086	reg1009828.p2	4.264	+	TSC_hg19_v1_chr19_+_36606369 D49738 BC052812 AF013488 BC005969 BT007424 DQ892900 DQ896150	-12597	+	TSC_hg19_v1_chr19_-_36605794 DQ893214 DQ896543 AB464045 BC017860 AK312206 BC017112 NM_006233 BC067794	-13011	-	NM_001281	-13109	+	TSC_hg19_v1_chr19_+_36630967 AK289606 X04106 NM_001003962 NM_001749 BC018931	11926	+	BC007779 TSC_hg19_v1_chr19_+_36630999	12003	+	TSC_hg19_v1_chr19_+_36631021 BC000592 BC011903 BC064998 BC017308 AY007141 BC023643 BC021933	12037	+	D49738|TBCB|1155|tubulin folding cofactor B##BC052812|TBCB|1155|tubulin folding cofactor B##AF013488|TBCB|1155|tubulin folding cofactor B##BC005969|TBCB|1155|tubulin folding cofactor B##BT007424|TBCB|1155|tubulin folding cofactor B##DQ892900|TBCB|1155|tubulin folding cofactor B##DQ896150|TBCB|1155|tubulin folding cofactor B##DQ893214|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##DQ896543|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##BC017860|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##AK312206|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##BC017112|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##NM_006233|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##BC067794|POLR2I|5438|polymerase (RNA) II (DNA directed) polypeptide I, 14.5kDa##NM_001281|TBCB|1155|tubulin folding cofactor B##AK289606|CAPNS1|826|calpain, small subunit 1##X04106|CAPNS1|826|calpain, small subunit 1##NM_001003962|CAPNS1|826|calpain, small subunit 1##NM_001749|CAPNS1|826|calpain, small subunit 1##BC018931|CAPNS1|826|calpain, small subunit 1##BC007779|CAPNS1|826|calpain, small subunit 1##BC000592|CAPNS1|826|calpain, small subunit 1##BC011903|CAPNS1|826|calpain, small subunit 1##BC064998|CAPNS1|826|calpain, small subunit 1##BC017308|CAPNS1|826|calpain, small subunit 1##AY007141|CAPNS1|826|calpain, small subunit 1##BC023643|CAPNS1|826|calpain, small subunit 1##BC021933|CAPNS1|826|calpain, small subunit 1	0.0	
chr3	111855103	111855226	reg1013089.p1	4.264	+	CU688884 BC030506 AY212246 AK313368 AK128276 AF521911 NM_001190259 NM_001190260 NM_152785	-3105	-	TSC_hg19_v1_chr3_+_111805267 AK303588 NM_001171747 NM_024616 AY830714 AK026839 BC017064 AK298076	-49936	+	AK131211 NM_001042575 BC117322	-96656	+	BC044801 NM_183061 AK128084	157924	-	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	196794	+	AL832529 AK129797 AK293399 BC031103 TSC_hg19_v1_chr3_+_112052024 AK074972	196860	+	BC030506|GCET2|257144|germinal center expressed transcript 2##AY212246|GCET2|257144|germinal center expressed transcript 2##AK313368|GCET2|257144|germinal center expressed transcript 2##AF521911|GCET2|257144|germinal center expressed transcript 2##NM_001190259|GCET2|257144|germinal center expressed transcript 2##NM_001190260|GCET2|257144|germinal center expressed transcript 2##NM_152785|GCET2|257144|germinal center expressed transcript 2##AK303588|C3orf52|79669|chromosome 3 open reading frame 52##NM_001171747|C3orf52|79669|chromosome 3 open reading frame 52##NM_024616|C3orf52|79669|chromosome 3 open reading frame 52##AY830714|C3orf52|79669|chromosome 3 open reading frame 52##AK026839|C3orf52|79669|chromosome 3 open reading frame 52##BC017064|C3orf52|79669|chromosome 3 open reading frame 52##AK298076|C3orf52|79669|chromosome 3 open reading frame 52##AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7##BC044801|SLC9A10|285335|solute carrier family 9, member 10##NM_183061|SLC9A10|285335|solute carrier family 9, member 10##AK128084|SLC9A10|285335|solute carrier family 9, member 10##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule##AL832529|CD200|4345|CD200 molecule##AK129797|CD200|4345|CD200 molecule##AK293399|CD200|4345|CD200 molecule##BC031103|CD200|4345|CD200 molecule##AK074972|CD200|4345|CD200 molecule	0.0	
chr1	156829735	156829915	reg1002220.p1	4.263	+	AF064078 AK310760 NM_014215	-1137	-	AB528908 EU832614 EU832686 AF097744 AK222737 AY763100 AF051325 AJ000553 AY763099 BC012107 AK313706 NM_001161441 NM_001161442 NM_001161444 NM_003975	-43256	-	AY763098 NM_001161443	-43887	-	M23102 TSC_hg19_v1_chr1_+_156830655 BC136554 BC144239 NM_001012331 NM_002529 AK290759 AK312704 BC062580	841	+	NM_001080471	33697	+	AK292342 NM_144702 BC033790	60607	+	AF064078|INSRR|3645|insulin receptor-related receptor##AK310760|INSRR|3645|insulin receptor-related receptor##NM_014215|INSRR|3645|insulin receptor-related receptor##EU832614|SH2D2A|9047|SH2 domain containing 2A##EU832686|SH2D2A|9047|SH2 domain containing 2A##AF097744|SH2D2A|9047|SH2 domain containing 2A##AK222737|SH2D2A|9047|SH2 domain containing 2A##AY763100|SH2D2A|9047|SH2 domain containing 2A##AF051325|SH2D2A|9047|SH2 domain containing 2A##AJ000553|SH2D2A|9047|SH2 domain containing 2A##AY763099|SH2D2A|9047|SH2 domain containing 2A##BC012107|SH2D2A|9047|SH2 domain containing 2A##AK313706|SH2D2A|9047|SH2 domain containing 2A##NM_001161441|SH2D2A|9047|SH2 domain containing 2A##NM_001161442|SH2D2A|9047|SH2 domain containing 2A##NM_001161444|SH2D2A|9047|SH2 domain containing 2A##NM_003975|SH2D2A|9047|SH2 domain containing 2A##AY763098|SH2D2A|9047|SH2 domain containing 2A##NM_001161443|SH2D2A|9047|SH2 domain containing 2A##M23102|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC136554|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC144239|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001012331|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_002529|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK290759|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK312704|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC062580|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001080471|PEAR1|375033|platelet endothelial aggregation receptor 1##AK292342|LRRC71|149499|leucine rich repeat containing 71##NM_144702|LRRC71|149499|leucine rich repeat containing 71##BC033790|LRRC71|149499|leucine rich repeat containing 71	0.0	
chr18	42553359	42553501	reg1034291.p1	4.263	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-292562	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-293316	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1696001	-	NM_001242692 AK292422	239522	+	AF349446 NM_007163	641335	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	750674	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.998395	CTCF.p2:8:0.998
chr19	2598922	2599102	reg1033637.p1	4.263	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-122774	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-142052	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-142076	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	103683	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	103730	-	AK124445 TSC_hg19_v1_chr19_-_2717420	118337	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr2	216924355	216924486	reg1032781.p2	4.263	+	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	-46084	-	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-623638	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-623900	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	22124	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	22272	+	TSC_hg19_v1_chr2_+_216974084 NM_021141	49632	+	AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169##NM_021141|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)	0.037733	
chr3	47285451	47285548	reg1034702.p1	4.263	+	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	-80060	-	TSC_hg19_v1_chr3_-_47098906 AK026837	-186556	-	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	-256029	+	BC015311 NM_001134878 NM_022342 NM_182902	38796	-	NM_025010 TSC_hg19_v1_chr3_+_47324433 AK023765 AK291477 AK295292 BX537953 BC015962 AB527175 AM393269 AM393767 BC032620	38929	+	AB040904 NM_015466 TSC_hg19_v1_chr3_+_47422510 AK055157 AK299906 AK295888 AK289502 AB025194 AF290614 AK295877 BC089042	137033	+	AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2##AK026837|SETD2|29072|SET domain containing 2##AK092871|NBEAL2|23218|neurobeachin-like 2##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9##NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)##AK023765|KLHL18|23276|kelch-like 18 (Drosophila)##AK291477|KLHL18|23276|kelch-like 18 (Drosophila)##AK295292|KLHL18|23276|kelch-like 18 (Drosophila)##BX537953|KLHL18|23276|kelch-like 18 (Drosophila)##BC015962|KLHL18|23276|kelch-like 18 (Drosophila)##AM393269|KLHL18|23276|kelch-like 18 (Drosophila)##AM393767|KLHL18|23276|kelch-like 18 (Drosophila)##BC032620|KLHL18|23276|kelch-like 18 (Drosophila)##AB040904|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_015466|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK055157|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK299906|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295888|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK289502|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AB025194|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AF290614|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295877|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##BC089042|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23	0.0	
chr5	112257141	112257219	reg1027004.p2	4.263	+	TSC_hg19_v1_chr5_+_112196983 AK311803 BC000186 X12791 AK313576 BC017830 BC010947 BC018669 AB587423	-60156	+	NM_001204193 NM_001204194 NM_001204196 NM_001204199 NM_003135 TSC_hg19_v1_chr5_+_112196975	-60251	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	-183607	+	CU688102 AY562243 BC065926 TSC_hg19_v1_chr5_-_112257925 BC000232 M74090 AK295436 AK298268 AK299902 AK300048 AK312522 M73547 AX775929 BX648005 NM_005669	807	-	TSC_hg19_v1_chr5_+_112312407 NM_001242377 NM_152624	55225	+	TSC_hg19_v1_chr5_+_112312506 AY135173 AY146650 BC017965 AK296361 AK090564 AX746512 BC064593 BC068042 CU687920	55348	+	AK311803|SRP19|6728|signal recognition particle 19kDa##BC000186|SRP19|6728|signal recognition particle 19kDa##X12791|SRP19|6728|signal recognition particle 19kDa##BC017830|SRP19|6728|signal recognition particle 19kDa##BC010947|SRP19|6728|signal recognition particle 19kDa##BC018669|SRP19|6728|signal recognition particle 19kDa##NM_001204193|SRP19|6728|signal recognition particle 19kDa##NM_001204194|SRP19|6728|signal recognition particle 19kDa##NM_001204196|SRP19|6728|signal recognition particle 19kDa##NM_001204199|SRP19|6728|signal recognition particle 19kDa##NM_003135|SRP19|6728|signal recognition particle 19kDa##NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli##AY562243|REEP5|7905|receptor accessory protein 5##BC065926|REEP5|7905|receptor accessory protein 5##BC000232|REEP5|7905|receptor accessory protein 5##M74090|REEP5|7905|receptor accessory protein 5##AK295436|REEP5|7905|receptor accessory protein 5##AK298268|REEP5|7905|receptor accessory protein 5##AK299902|REEP5|7905|receptor accessory protein 5##AK312522|REEP5|7905|receptor accessory protein 5##BX648005|REEP5|7905|receptor accessory protein 5##NM_005669|REEP5|7905|receptor accessory protein 5##NM_001242377|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##NM_152624|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY135173|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY146650|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC017965|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK296361|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK090564|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC064593|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC068042|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)	0.01521	
chr7	105712220	105712338	reg1033229.p1	4.263	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	-108581	+	TSC_hg19_v1_chr7_+_105517250 AK125261	-195015	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	-195294	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	40402	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	40465	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	40736	-	NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3##AK125261|CDHR3|222256|cadherin-related family member 3##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##X61382|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1	0.0	
chr10	76751376	76751469	reg1033975.p2	4.262	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-165068	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-814835	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-814892	+	AY686755 NM_001003892 BC137321 BC137322	66883	-	AB027004 AB103375 NM_016364	107825	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	117492	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr1	111740285	111740397	reg1029056.p1	4.262	+	AF068302 TSC_hg19_v1_chr1_+_111682893 BC032610	-57444	+	NM_006090 TSC_hg19_v1_chr1_+_111682844 AK023381	-57487	+	TSC_hg19_v1_chr1_-_111682782 NM_178454	-57539	-	TSC_hg19_v1_chr1_+_111742947 AK057181	2607	+	CU678770 TSC_hg19_v1_chr1_-_111743188	2795	-	TSC_hg19_v1_chr1_-_111743272 BC004557 NM_024901	2929	-	AF068302|CEPT1|10390|choline/ethanolamine phosphotransferase 1##BC032610|CEPT1|10390|choline/ethanolamine phosphotransferase 1##NM_006090|CEPT1|10390|choline/ethanolamine phosphotransferase 1##AK023381|CEPT1|10390|choline/ethanolamine phosphotransferase 1##NM_178454|DRAM2|128338|DNA-damage regulated autophagy modulator 2##BC004557|DENND2D|79961|DENN/MADD domain containing 2D##NM_024901|DENND2D|79961|DENN/MADD domain containing 2D	0.017824	
chr17	30438588	30438672	reg1029537.p2	4.262	+	AY386261 AK302740 BC117373 BC143578 BC143581 AK310287 NM_052888 HQ258530 AJ314647	-90537	+	AB385289 TSC_hg19_v1_chr17_+_30264319	-174336	+	TSC_hg19_v1_chr17_+_30264164 BC015704	-174467	+	TSC_hg19_v1_chr17_+_30469463 BC060781 NM_001033566 NM_001033568 NM_018307 AJ496730	30798	+	TSC_hg19_v1_chr17_+_30469520 BC041114	30892	+	TSC_hg19_v1_chr17_+_30469544 BC110895	30915	+	AY386261|LRRC37B|114659|leucine rich repeat containing 37B##AK302740|LRRC37B|114659|leucine rich repeat containing 37B##BC117373|LRRC37B|114659|leucine rich repeat containing 37B##BC143578|LRRC37B|114659|leucine rich repeat containing 37B##BC143581|LRRC37B|114659|leucine rich repeat containing 37B##AK310287|LRRC37B|114659|leucine rich repeat containing 37B##NM_052888|LRRC37B|114659|leucine rich repeat containing 37B##HQ258530|LRRC37B|114659|leucine rich repeat containing 37B##AJ314647|LRRC37B|114659|leucine rich repeat containing 37B##BC015704|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)##BC060781|RHOT1|55288|ras homolog gene family, member T1##NM_001033566|RHOT1|55288|ras homolog gene family, member T1##NM_001033568|RHOT1|55288|ras homolog gene family, member T1##NM_018307|RHOT1|55288|ras homolog gene family, member T1##AJ496730|RHOT1|55288|ras homolog gene family, member T1##BC041114|RHOT1|55288|ras homolog gene family, member T1##BC110895|RHOT1|55288|ras homolog gene family, member T1	0.572698	
chr19	36185366	36185479	reg1000489.p2	4.262	+	BC107097 BC107098 NM_007000 AF085807	-27706	+	TSC_hg19_v1_chr19_+_36139253 D28426 BC002478 X54473 X13923	-46170	+	TSC_hg19_v1_chr19_+_36139222 AK312140	-46198	+	AF130255 NM_014383	18407	+	TSC_hg19_v1_chr19_+_36208923 AJ007041 NM_014727	23508	+	TSC_hg19_v1_chr19_+_36209125 AF186605	23764	+	BC107097|UPK1A|11045|uroplakin 1A##BC107098|UPK1A|11045|uroplakin 1A##NM_007000|UPK1A|11045|uroplakin 1A##AF085807|UPK1A|11045|uroplakin 1A##D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##AK312140|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##AF130255|ZBTB32|27033|zinc finger and BTB domain containing 32##NM_014383|ZBTB32|27033|zinc finger and BTB domain containing 32##AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##AF186605|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4	0.0612	
chr2	206950879	206950985	reg1033119.p2	4.262	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	-21	-	TSC_hg19_v1_chr2_+_206547371 AK290934	-403571	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	-403754	+	AK295987 NM_001199984	72985	-	X61100 AK098395 BC018900 BC022368 TSC_hg19_v1_chr2_-_207024145 AK300585 BC030833 AK295705 AK295966 AK298320 BC004133 NM_001199981 NM_001199982 NM_001199983 NM_005006	73240	-	NM_001037663 NM_001959 NM_021121 TSC_hg19_v1_chr2_+_207024320	73386	+	AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D##AK290934|NRP2|8828|neuropilin 2##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AK295987|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199984|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001037663|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##NM_001959|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##NM_021121|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	0.0	
chr4	10065506	10065586	reg1033761.p2	4.262	+	AK310895 BC018897 NM_001001290 AK096819	-23624	-	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	-42422	-	NM_000798	-282289	+	TSC_hg19_v1_chr4_-_10118286 AB385044 CU674086 CU677992	52741	-	TSC_hg19_v1_chr4_-_10118356 AB209746 BC030541	52780	-	TSC_hg19_v1_chr4_-_10118358 BC002489 BC000201	52818	-	AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_000798|DRD5|1816|dopamine receptor D5##AB209746|WDR1|9948|WD repeat domain 1##BC030541|WDR1|9948|WD repeat domain 1##BC002489|WDR1|9948|WD repeat domain 1##BC000201|WDR1|9948|WD repeat domain 1	0.0	
chr4	83955934	83956115	reg1026337.p1	4.262	+	TSC_hg19_v1_chr4_-_83934095 AK292769 NM_001115007	-21996	-	AB111889 BX640657 TSC_hg19_v1_chr4_-_83931982 BX640966 NM_001115008 NM_194282	-24030	-	BC109278 BC109277 BX537919 TSC_hg19_v1_chr4_-_83931937 AK294256	-24113	-	NM_016129 AK001148 TSC_hg19_v1_chr4_+_83956368 AK024005 BC093007 AK223178 BC004302 BC009292 AB587420 AF100757 AK001210	300	+	BC012205 NM_001130716	74979	-	AF208846 EU570985 EU570986 TSC_hg19_v1_chr4_-_84035890 AJ422147	79867	-	AK292769|LIN54|132660|lin-54 homolog (C. elegans)##NM_001115007|LIN54|132660|lin-54 homolog (C. elegans)##AB111889|LIN54|132660|lin-54 homolog (C. elegans)##BX640657|LIN54|132660|lin-54 homolog (C. elegans)##BX640966|LIN54|132660|lin-54 homolog (C. elegans)##NM_001115008|LIN54|132660|lin-54 homolog (C. elegans)##NM_194282|LIN54|132660|lin-54 homolog (C. elegans)##BC109278|LIN54|132660|lin-54 homolog (C. elegans)##BC109277|LIN54|132660|lin-54 homolog (C. elegans)##BX537919|LIN54|132660|lin-54 homolog (C. elegans)##AK294256|LIN54|132660|lin-54 homolog (C. elegans)##NM_016129|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK001148|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK024005|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC093007|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK223178|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC004302|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC009292|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AF100757|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##AK001210|COPS4|51138|COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)##BC012205|PLAC8|51316|placenta-specific 8##NM_001130716|PLAC8|51316|placenta-specific 8##AF208846|PLAC8|51316|placenta-specific 8##EU570985|PLAC8|51316|placenta-specific 8##EU570986|PLAC8|51316|placenta-specific 8##AJ422147|PLAC8|51316|placenta-specific 8	0.0	
chr6	144411653	144411778	reg1036359.p1	4.262	+	EF100438 EF100439 EF100440 EF100441 EF100442 EF100443 EF100444 EF100445 TSC_hg19_v1_chr6_-_144385724 NM_001080951 NM_001080955	-26025	-	TSC_hg19_v1_chr6_-_144329394 AK314570 BC059359 AK096331 NM_001080952 NM_001080953 NM_001080954 NM_001080956 NM_002656 NM_006718 AJ311395 U72621	-82251	-	EF100446 EF100447 EF100448 EF100449 EF100450 EF100451 EF100452 TSC_hg19_v1_chr6_-_144329322	-82427	-	AB528231 AM393071 BC000198 TSC_hg19_v1_chr6_-_144416703 AK312079 AK074417	4956	-	NM_031287 TSC_hg19_v1_chr6_-_144416757	5047	-	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	60006	+	EF100438|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100439|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100440|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100441|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100442|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100443|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100444|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100445|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080951|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080955|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AK314570|PLAGL1|5325|pleiomorphic adenoma gene-like 1##BC059359|HYMAI|57061|hydatidiform mole associated and imprinted (non-protein coding)##AK096331|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080952|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080953|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080954|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080956|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_002656|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_006718|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AJ311395|PLAGL1|5325|pleiomorphic adenoma gene-like 1##U72621|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100446|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100447|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100448|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100449|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100450|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100451|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100452|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AM393071|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##BC000198|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK312079|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK074417|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##NM_031287|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11	0.455024	CTCF.p2:7:0.455
chr7	130499671	130499777	reg1031279.p1	4.262	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-80797	-	AF294347 AF431815 BC038415 NM_052933	-128369	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-146129	-	TSC_hg19_v1_chr7_-_130792857 BC047367	293135	-	AK294384 NM_001145354	295130	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	512882	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.025215	
chr8	2480881	2480973	reg1022246.p2	4.262	+	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-487725	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-528019	+	TSC_hg19_v1_chr8_+_1950340 BC169332	-530575	+	AK128880 TSC_hg19_v1_chr8_-_2585966	105055	-	AY017307 TSC_hg19_v1_chr8_-_4852228	2371298	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	2371367	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##BC169332|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.109292	
chr11	73371439	73371619	reg1000319.p1	4.261	+	AK290109 NM_001130036	-11795	+	NM_001130034 NM_001130035 BC008075 AB209716 AK289620 TSC_hg19_v1_chr11_+_73358695 AK296033 AK301299 AF093249 AF100612 AK289909 AK311158	-12866	+	AF101054 NM_001130033 NM_021200 U89715	-14307	+	AK301534 NM_001243719	99607	-	BC034996 TSC_hg19_v1_chr11_-_73472120 BC003617 AK309311 AK223551 AK289748 BC096818 AK057157 BC068486 NM_001243718 NM_002869 NM_198896	100618	-	AF161408 TSC_hg19_v1_chr11_+_73498935 AK297746 NM_016055 BC009764 AK309219 AK310005	127397	+	AK290109|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130036|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130034|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130035|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##BC008075|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AB209716|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289620|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK296033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK301299|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF093249|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF100612|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289909|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK311158|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF101054|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_021200|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##U89715|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK301534|RAB6A|5870|RAB6A, member RAS oncogene family##NM_001243719|RAB6A|5870|RAB6A, member RAS oncogene family##BC034996|RAB6A|5870|RAB6A, member RAS oncogene family##BC003617|RAB6A|5870|RAB6A, member RAS oncogene family##AK309311|RAB6A|5870|RAB6A, member RAS oncogene family##AK223551|RAB6A|5870|RAB6A, member RAS oncogene family##AK289748|RAB6A|5870|RAB6A, member RAS oncogene family##BC096818|RAB6A|5870|RAB6A, member RAS oncogene family##AK057157|RAB6A|5870|RAB6A, member RAS oncogene family##BC068486|RAB6A|5870|RAB6A, member RAS oncogene family##NM_001243718|RAB6A|5870|RAB6A, member RAS oncogene family##NM_002869|RAB6A|5870|RAB6A, member RAS oncogene family##NM_198896|RAB6A|5870|RAB6A, member RAS oncogene family##AF161408|MRPL48|51642|mitochondrial ribosomal protein L48##AK297746|MRPL48|51642|mitochondrial ribosomal protein L48##NM_016055|MRPL48|51642|mitochondrial ribosomal protein L48##BC009764|MRPL48|51642|mitochondrial ribosomal protein L48##AK309219|MRPL48|51642|mitochondrial ribosomal protein L48##AK310005|MRPL48|51642|mitochondrial ribosomal protein L48	0.0	
chr13	33802995	33803169	reg1002769.p2	4.261	+	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-22918	-	AY082590 BC046563 NM_001243466 NM_178007	-42867	-	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-212559	+	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	56785	-	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	121686	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	447853	-	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr16	13483991	13484172	reg1034018.p1	4.261	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-488613	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-586362	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-586430	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	529950	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	681005	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	796437	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.0	
chr2	130055180	130055261	reg1022657.p2	4.261	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-978920	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-1127173	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-1206359	+	NM_032144 AL136727	682015	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	831638	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	847391	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.086898	
chr2	70882493	70882585	reg1034831.p1	4.261	+	NM_001099691 NM_003236	-101393	-	AK309220 AK309066 CU675103 BT006833 AF149096 AF149097 AF149098 X70340 K03222 M31172 AK290151 AK312899 BC005308 TSC_hg19_v1_chr2_-_70780995	-101731	-	AM393139 AB528755 AK225148 BC026293 TSC_hg19_v1_chr2_-_70529198 AL833147 BC014975 AK225151 AK309543 AK315877 AK027574 NM_032822	-353333	-	BC065525 NM_001185054	112307	-	TSC_hg19_v1_chr2_-_70995330 BC056881 BC051882 BC010237 BC041666 BC027876 AK297250 AK309773 AK291007 AB209227 AB593080 NM_001185055 NM_001617 NM_017482 NM_017488	112752	-	BC039536 AB463644 AY541030 NM_001004311	135213	-	NM_001099691|TGFA|7039|transforming growth factor, alpha##NM_003236|TGFA|7039|transforming growth factor, alpha##AK309220|TGFA|7039|transforming growth factor, alpha##AK309066|TGFA|7039|transforming growth factor, alpha##BT006833|TGFA|7039|transforming growth factor, alpha##AF149096|TGFA|7039|transforming growth factor, alpha##AF149097|TGFA|7039|transforming growth factor, alpha##AF149098|TGFA|7039|transforming growth factor, alpha##X70340|TGFA|7039|transforming growth factor, alpha##K03222|TGFA|7039|transforming growth factor, alpha##M31172|TGFA|7039|transforming growth factor, alpha##AK290151|TGFA|7039|transforming growth factor, alpha##AK312899|TGFA|7039|transforming growth factor, alpha##BC005308|TGFA|7039|transforming growth factor, alpha##AM393139|FAM136A|84908|family with sequence similarity 136, member A##AK225148|FAM136A|84908|family with sequence similarity 136, member A##BC026293|FAM136A|84908|family with sequence similarity 136, member A##AL833147|FAM136A|84908|family with sequence similarity 136, member A##BC014975|FAM136A|84908|family with sequence similarity 136, member A##AK225151|FAM136A|84908|family with sequence similarity 136, member A##AK309543|FAM136A|84908|family with sequence similarity 136, member A##AK315877|FAM136A|84908|family with sequence similarity 136, member A##AK027574|FAM136A|84908|family with sequence similarity 136, member A##NM_032822|FAM136A|84908|family with sequence similarity 136, member A##BC065525|ADD2|119|adducin 2 (beta)##NM_001185054|ADD2|119|adducin 2 (beta)##BC056881|ADD2|119|adducin 2 (beta)##BC051882|ADD2|119|adducin 2 (beta)##BC010237|ADD2|119|adducin 2 (beta)##BC041666|ADD2|119|adducin 2 (beta)##BC027876|ADD2|119|adducin 2 (beta)##AK297250|ADD2|119|adducin 2 (beta)##AK309773|ADD2|119|adducin 2 (beta)##AK291007|ADD2|119|adducin 2 (beta)##AB209227|ADD2|119|adducin 2 (beta)##AB593080|ADD2|119|adducin 2 (beta)##NM_001185055|ADD2|119|adducin 2 (beta)##NM_001617|ADD2|119|adducin 2 (beta)##NM_017482|ADD2|119|adducin 2 (beta)##NM_017488|ADD2|119|adducin 2 (beta)##BC039536|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##AY541030|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##NM_001004311|FIGLA|344018|folliculogenesis specific basic helix-loop-helix	0.0	
chr5	8012579	8012678	reg1026282.p1	4.261	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-143318	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-143369	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-143496	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	1533566	-	BC095521 NM_019599	1617834	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	2237356	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.0	
chr6	693028	693192	reg1035502.p1	4.261	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-20	-	AF508547 BC101697 BC101699 NM_148959	-36157	-	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-301346	+	BC053850 NM_033260	619564	+	NM_001452 U13220 AB463646	697015	+	BC134421 NM_001453	917570	+	AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1	0.0	
chr9	100996795	100996917	reg1033631.p1	4.261	+	TSC_hg19_v1_chr9_-_100954922 AK292788 BC011690 AB209809 NM_052820	-41923	-	NM_003389	-61683	-	TSC_hg19_v1_chr9_-_100881526 AK055833	-115312	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	20865	-	TSC_hg19_v1_chr9_-_101018013 NM_018421	21148	-	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	474329	-	AK292788|CORO2A|7464|coronin, actin binding protein, 2A##BC011690|CORO2A|7464|coronin, actin binding protein, 2A##AB209809|CORO2A|7464|coronin, actin binding protein, 2A##NM_052820|CORO2A|7464|coronin, actin binding protein, 2A##NM_003389|CORO2A|7464|coronin, actin binding protein, 2A##AK055833|TRIM14|9830|tripartite motif containing 14##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##NM_018421|TBC1D2|55357|TBC1 domain family, member 2##DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2	0.115498	
chr11	57559816	57559936	reg1024490.p2	4.260	+	NM_001085458 NM_001085459 NM_001085460 NM_001085461 NM_001085462 NM_001085463 NM_001085464 NM_001085465 NM_001085466 NM_001085467 NM_001085468 NM_001085469 NM_001206883 NM_001206884 NM_001206885 NM_001206886 NM_001206887 NM_001206888 NM_001206889 NM_001206890 NM_001206891 NM_001331 TSC_hg19_v1_chr11_+_57529331 AF062317 AF062318 AF062319 AF062320 AF062321 AF062322 AF062323 AF062324 AF062325 AF062326 AF062327 AF062328 AF062329 AF062330 AF062331 AF062332 AF062333 AF062334 AF062335 AF062336 AF062337 AF062338 AF062339 AF062340 AF062341 AF062342 AF062343 AF062344 BC075795	-30537	+	NM_001145101	-40624	-	TSC_hg19_v1_chr11_+_57508992 BC021122	-50876	+	BC110819 NM_001005212	231476	+	BC151146 BC151147 NM_001005186	238536	+	NM_001005211	327039	-	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206883|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206884|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206885|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206886|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206887|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206888|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206889|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206890|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206891|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1##BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001145101|BTBD18|643376|BTB (POZ) domain containing 18##BC021122|C11orf31|280636|chromosome 11 open reading frame 31##BC110819|OR9Q1|219956|olfactory receptor, family 9, subfamily Q, member 1##NM_001005212|OR9Q1|219956|olfactory receptor, family 9, subfamily Q, member 1##BC151146|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##BC151147|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##NM_001005186|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##NM_001005211|OR9I1|219954|olfactory receptor, family 9, subfamily I, member 1	0.0	
chr12	62829571	62829697	reg1025863.p2	4.260	+	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	-175450	+	BC050347 NM_178539	-243051	-	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	-2746495	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	30945	+	BC042679 AB017814 AB384555 TSC_hg19_v1_chr12_+_62861012	31281	+	AK022671 TSC_hg19_v1_chr12_+_62954346	124677	+	NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)##AB017814|MON2|23041|MON2 homolog (S. cerevisiae)##AK022671|MON2|23041|MON2 homolog (S. cerevisiae)	0.0	
chr14	70047031	70047134	reg1029838.p2	4.260	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	-95602	+	TSC_hg19_v1_chr14_+_69865419 BC047682	-181646	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	-181687	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	31228	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	31309	+	TSC_hg19_v1_chr14_+_70233809 BX640605	186724	+	AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC047682|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##D87434|KIAA0247|9766|KIAA0247##BX640605|SRSF5|6430|serine/arginine-rich splicing factor 5	0.996743	CTCF.p2:-34:0.997
chr1	55609461	55609544	reg1032526.p1	4.260	+	TSC_hg19_v1_chr1_+_55505220 AK075365	-104278	+	NM_174936 TSC_hg19_v1_chr1_+_55505192	-104332	+	AK129999 AY034632 NM_057176 BC103898 BC103899 BC103900	-144881	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	71534	-	TSC_hg19_v1_chr1_+_55681088 BC040313	71582	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	1435517	-	AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##NM_174936|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AK129999|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##AY034632|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_057176|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103898|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103899|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103900|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_015306|USP24|23358|ubiquitin specific peptidase 24##BC040313|LOC100507634|100507634|uncharacterized LOC100507634##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.321062	CTCF.p2:22:0.321
chr22	20961957	20962024	reg1033860.p2	4.260	+	TSC_hg19_v1_chr22_+_20918811 U80745	-43166	+	BC017110 TSC_hg19_v1_chr22_+_20909388	-52683	+	AB463109 CU013137 CU013425 AF328769 TSC_hg19_v1_chr22_+_20861965	-100026	+	L36151 NM_002650	126964	-	TSC_hg19_v1_chr22_+_21128411 NM_000185 AK314200 AK225292 BC035028	166406	+	AB384703 TSC_hg19_v1_chr22_-_21213029 AK302424	251040	-	U80745|MED15|51586|mediator complex subunit 15##BC017110|MED15|51586|mediator complex subunit 15##CU013137|MED15|51586|mediator complex subunit 15##CU013425|MED15|51586|mediator complex subunit 15##AF328769|MED15|51586|mediator complex subunit 15##L36151|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_002650|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_000185|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK314200|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK225292|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##BC035028|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK302424|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha	0.0	
chr3	196230548	196230648	reg1030138.p2	4.260	+	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	-20	-	TSC_hg19_v1_chr3_-_196159304 NM_015562	-71265	-	TSC_hg19_v1_chr3_-_196159299 AK026451 AK129880 AK303630 AK308699 AK307899	-71299	-	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	11615	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	64792	-	AK025697 TSC_hg19_v1_chr3_+_196295533	64909	+	BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##NM_015562|UBXN7|26043|UBX domain protein 7##AK026451|UBXN7|26043|UBX domain protein 7##AK129880|UBXN7|26043|UBX domain protein 7##AK303630|UBXN7|26043|UBX domain protein 7##AK308699|UBXN7|26043|UBX domain protein 7##AK307899|UBXN7|26043|UBX domain protein 7##AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53##AK025697|FBXO45|200933|F-box protein 45	0.0	
chr5	169146994	169147175	reg1027857.p2	4.260	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-82784	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-82840	+	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	-136363	+	AK055998 NM_001129891	260659	-	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	385887	+	BC030767 NM_001102609 BC092511	512912	+	D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58	0.0	
chr7	72624111	72624178	reg1033759.p2	4.260	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	-55113	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-198902	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-227270	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	98680	-	AK057366 AY081948 AY081949 NM_178125	117940	-	NM_001135211 AK302121 NM_003602 AK310255 BC036817 AF038847 CU691432 EU176233 EU176537 GQ129339 GQ129340	118148	+	BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50##NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa##AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa##NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa##AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa##BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa##AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa	0.0	
chr11	127713825	127713955	reg1036340.p2	4.259	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-840585	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-843165	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-843230	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	678073	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	678244	-	BX640634 NM_001143820	743562	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.992746	CTCF.p2:-14:0.993
chr12	65700475	65700568	reg1031604.p1	4.259	+	TSC_hg19_v1_chr12_+_65672705 NM_001193461	-27797	+	NM_001031679 NM_001193460 NM_198080 TSC_hg19_v1_chr12_+_65672483 AK316365 AK293084 AK299065 AY358229 BX648776 AL833622 BC040053	-27996	+	TSC_hg19_v1_chr12_+_65563362 AK312473 NM_001167614 NM_014319 AK304317 AF112299	-137167	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	517686	+	TSC_hg19_v1_chr12_+_66218605 AK311399	518086	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	518492	+	NM_001193461|MSRB3|253827|methionine sulfoxide reductase B3##NM_001031679|MSRB3|253827|methionine sulfoxide reductase B3##NM_001193460|MSRB3|253827|methionine sulfoxide reductase B3##NM_198080|MSRB3|253827|methionine sulfoxide reductase B3##AK316365|MSRB3|253827|methionine sulfoxide reductase B3##AK293084|MSRB3|253827|methionine sulfoxide reductase B3##AK299065|MSRB3|253827|methionine sulfoxide reductase B3##AY358229|MSRB3|253827|methionine sulfoxide reductase B3##BX648776|MSRB3|253827|methionine sulfoxide reductase B3##AL833622|MSRB3|253827|methionine sulfoxide reductase B3##BC040053|MSRB3|253827|methionine sulfoxide reductase B3##AK312473|LEMD3|23592|LEM domain containing 3##NM_001167614|LEMD3|23592|LEM domain containing 3##NM_014319|LEMD3|23592|LEM domain containing 3##AK304317|LEMD3|23592|LEM domain containing 3##AF112299|LEMD3|23592|LEM domain containing 3##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2	0.993704	CTCF.p2:-20:0.994
chr13	113422334	113422439	reg1032669.p1	4.259	+	TSC_hg19_v1_chr13_+_113344493 NM_015205 NM_032189	-77807	+	TSC_hg19_v1_chr13_-_113344130 AK057085	-78280	-	AK129953 NM_207440	-121029	+	TSC_hg19_v1_chr13_+_113622764 AB002360	200399	+	TSC_hg19_v1_chr13_+_113623680 AK315969 NM_001112732 AK295670	201209	+	TSC_hg19_v1_chr13_+_113633625 AK307867	211253	+	NM_015205|ATP11A|23250|ATPase, class VI, type 11A##NM_032189|ATP11A|23250|ATPase, class VI, type 11A##AK057085|LOC440149|440149|uncharacterized LOC440149##AK129953|C13orf35|400165|chromosome 13 open reading frame 35##NM_207440|C13orf35|400165|chromosome 13 open reading frame 35##AB002360|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK315969|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##NM_001112732|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK295670|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK307867|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	0.0	
chr17	70982167	70982347	reg1004940.p1	4.259	+	AK000477 TSC_hg19_v1_chr17_-_70588944	-393314	-	TSC_hg19_v1_chr17_+_70117187 BC007951	-865017	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-865087	+	AF331643 TSC_hg19_v1_chr17_-_71088816	106559	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	106566	-	BC035631 TSC_hg19_v1_chr17_-_71088831	106574	-	AK000477|LOC100499467|100499467|uncharacterized LOC100499467##BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.795009	CTCF.p2:-40:0.795
chr21	46327709	46327822	reg1030476.p1	4.259	+	TSC_hg19_v1_chr21_+_46293937 BC092510	-33805	+	TSC_hg19_v1_chr21_-_46293609 AK315626 AK299204 AF149785 NM_004339	-34052	-	TSC_hg19_v1_chr21_-_46293607 BC012858 AK298557	-34162	-	TSC_hg19_v1_chr21_-_46340815 L78790 AK303488 M15395 AK128344	13032	-	AK222505 TSC_hg19_v1_chr21_-_46340824	13066	-	AB208909 TSC_hg19_v1_chr21_-_46340890 NM_000211	13154	-	AK315626|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AK299204|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AF149785|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##NM_004339|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##L78790|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK303488|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##M15395|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK128344|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK222505|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AB208909|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##NM_000211|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)	0.0	
chr4	171011343	171011450	reg1031491.p1	4.259	+	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	-198	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	-63891	-	BC066912 AF327560 AK308263 NM_001009554	-86474	-	TSC_hg19_v1_chr4_-_171011377 BC031068 AK055952 NM_182662 AK314729	18	-	NM_001034845 BC047551 BC144036 BC144037 BC063015	1723248	+	TSC_hg19_v1_chr4_+_174089961 NM_017423 BC046129 BC047468 AJ002744 CU690424	3078556	+	AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##BC066912|MFAP3L|9848|microfibrillar-associated protein 3-like##AF327560|MFAP3L|9848|microfibrillar-associated protein 3-like##AK308263|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001009554|MFAP3L|9848|microfibrillar-associated protein 3-like##BC031068|AADAT|51166|aminoadipate aminotransferase##AK055952|AADAT|51166|aminoadipate aminotransferase##NM_182662|AADAT|51166|aminoadipate aminotransferase##AK314729|AADAT|51166|aminoadipate aminotransferase##NM_001034845|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC047551|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##BC063015|GALNTL6|442117|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6##NM_017423|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC046129|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##BC047468|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)##AJ002744|GALNT7|51809|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 7 (GalNAc-T7)	0.324734	CTCF.p2:24:0.282
chr8	142137922	142138023	reg1026463.p1	4.259	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-126716	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-492348	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-616409	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	765	+	AK128212 NM_001080431	100700	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	126218	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.153713	
chr8	61842082	61842262	reg1021254.p2	4.259	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-250770	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-250884	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-412422	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	358378	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	760174	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	784846	-	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase	0.0	
chr9	5554362	5554533	reg1035161.p2	4.259	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	-43784	+	TSC_hg19_v1_chr9_+_5450455 NM_014143 DQ836393 AK300470 AK314567 AF233516 BC069381	-103940	+	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	-116567	-	TSC_hg19_v1_chr9_+_5629121 NM_001135920 NM_001206557 NM_020829	74680	+	BC036853 TSC_hg19_v1_chr9_-_5630098	75643	-	AL834191 AB058718 TSC_hg19_v1_chr9_-_5833045 BC136771 BC136773 BC144404	278504	-	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_014143|CD274|29126|CD274 molecule##DQ836393|CD274|29126|CD274 molecule##AK300470|CD274|29126|CD274 molecule##AK314567|CD274|29126|CD274 molecule##AF233516|CD274|29126|CD274 molecule##BC069381|CD274|29126|CD274 molecule##BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46##NM_001135920|KIAA1432|57589|KIAA1432##NM_001206557|KIAA1432|57589|KIAA1432##NM_020829|KIAA1432|57589|KIAA1432##BC036853|C9orf46|55848|chromosome 9 open reading frame 46##AL834191|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AB058718|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136771|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136773|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC144404|ERMP1|79956|endoplasmic reticulum metallopeptidase 1	0.0	
chr13	111335691	111335802	reg1033201.p1	4.258	+	TSC_hg19_v1_chr13_-_111268694 AK095260	-67048	-	TSC_hg19_v1_chr13_+_111267898 AK093771 AK298917 AX748297 AK302117 AK057767 AK296758 NM_001242881 NM_018210 AK296227 AK024260 BC041028 AK001631 AK225129	-67704	+	TSC_hg19_v1_chr13_+_111267870 NM_001242882 NM_001242883	-67916	+	TSC_hg19_v1_chr13_-_111358444 AB062436	22692	-	TSC_hg19_v1_chr13_-_111358447 BC007220	22702	-	TSC_hg19_v1_chr13_-_111358460 AK022180 NM_024537	22721	-	AK093771|CARKD|55739|carbohydrate kinase domain containing##AK298917|CARKD|55739|carbohydrate kinase domain containing##AK302117|CARKD|55739|carbohydrate kinase domain containing##AK057767|CARKD|55739|carbohydrate kinase domain containing##AK296758|CARKD|55739|carbohydrate kinase domain containing##NM_001242881|CARKD|55739|carbohydrate kinase domain containing##NM_018210|CARKD|55739|carbohydrate kinase domain containing##AK296227|CARKD|55739|carbohydrate kinase domain containing##AK024260|CARKD|55739|carbohydrate kinase domain containing##BC041028|CARKD|55739|carbohydrate kinase domain containing##AK001631|CARKD|55739|carbohydrate kinase domain containing##AK225129|CARKD|55739|carbohydrate kinase domain containing##NM_001242882|CARKD|55739|carbohydrate kinase domain containing##NM_001242883|CARKD|55739|carbohydrate kinase domain containing##AB062436|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##BC007220|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##AK022180|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##NM_024537|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)	0.737365	CTCF.p2:-10:0.737
chr13	63699153	63699305	reg1033913.p2	4.258	+	AK289924 NM_022843	-1709575	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-1709976	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-2727750	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	4105275	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	6983312	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	8741030	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.997953	CTCF.p2:-34:0.998
chr19	49009724	49009902	reg1002618.p2	4.258	+	TSC_hg19_v1_chr19_+_48972625 AB209573 BC038713 AK292405 U70728 AK299590 BC004361 AB528907 DQ892565 DQ896856 X99753	-37144	+	NM_004228 NM_017457 TSC_hg19_v1_chr19_+_48972572	-37295	+	BC035918 NM_170720	-45308	+	AB384647 TSC_hg19_v1_chr19_-_49014849	5027	-	AB067470 NM_001080434	6618	-	TSC_hg19_v1_chr19_+_49055432 NM_177973 U92315 BC034694 CU689942	45651	+	AB209573|CYTH2|9266|cytohesin 2##BC038713|CYTH2|9266|cytohesin 2##AK292405|CYTH2|9266|cytohesin 2##U70728|CYTH2|9266|cytohesin 2##AK299590|CYTH2|9266|cytohesin 2##BC004361|CYTH2|9266|cytohesin 2##DQ892565|CYTH2|9266|cytohesin 2##DQ896856|CYTH2|9266|cytohesin 2##X99753|CYTH2|9266|cytohesin 2##NM_004228|CYTH2|9266|cytohesin 2##NM_017457|CYTH2|9266|cytohesin 2##BC035918|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##NM_170720|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##AB067470|LMTK3|114783|lemur tyrosine kinase 3##NM_001080434|LMTK3|114783|lemur tyrosine kinase 3##NM_177973|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##U92315|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##BC034694|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1	0.0	
chr2	20622786	20622890	reg1037698.p1	4.258	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-72419	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-95705	-	AF272350 TSC_hg19_v1_chr2_-_20512079	-110789	-	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	23994	+	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	228010	-	AF522369 NM_182828	243585	+	AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)##AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7	0.966823	CTCF.p2:-1:0.967
chr3	150102766	150102947	reg1036650.p1	4.258	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-413776	+	TSC_hg19_v1_chr3_-_149688960 BC043646	-413927	-	TSC_hg19_v1_chr3_-_149688683 AB464068 AF228738 EU832616 EU832688 AK311782 L10678 BC002964 BC095444 AK307227 AK311780 BC018049 AK297915 NM_002628 NM_053024	-414160	-	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	23216	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	23907	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	161114	-	BC012363|LOC646903|646903|uncharacterized LOC646903##BC043646|PFN2|5217|profilin 2##AF228738|PFN2|5217|profilin 2##EU832616|PFN2|5217|profilin 2##EU832688|PFN2|5217|profilin 2##AK311782|PFN2|5217|profilin 2##L10678|PFN2|5217|profilin 2##BC002964|PFN2|5217|profilin 2##BC095444|PFN2|5217|profilin 2##AK307227|PFN2|5217|profilin 2##AK311780|PFN2|5217|profilin 2##BC018049|PFN2|5217|profilin 2##AK297915|PFN2|5217|profilin 2##NM_002628|PFN2|5217|profilin 2##NM_053024|PFN2|5217|profilin 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.0	
chr3	167645986	167646089	reg1028891.p1	4.258	+	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-192548	+	BC002506 NM_007217 AF022385 NM_145860 TSC_hg19_v1_chr3_-_167452681 BC016353 NM_145859 AK291130	-193386	-	TSC_hg19_v1_chr3_-_167371732 AK097556	-274314	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	167078	-	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	167394	-	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	1218042	-	NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC002506|PDCD10|11235|programmed cell death 10##NM_007217|PDCD10|11235|programmed cell death 10##AF022385|PDCD10|11235|programmed cell death 10##NM_145860|PDCD10|11235|programmed cell death 10##BC016353|PDCD10|11235|programmed cell death 10##NM_145859|PDCD10|11235|programmed cell death 10##AK291130|PDCD10|11235|programmed cell death 10##AK097556|WDR49|151790|WD repeat domain 49##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus	0.043528	
chr3	9291347	9291494	reg1031774.p1	4.258	+	TSC_hg19_v1_chr3_-_9291320 NM_001033117 NM_014850 BC140004 AK054831	-102	-	AB007871 AB384477 AK094355 AF427144 TSC_hg19_v1_chr3_-_9290871 AF464189	-676	-	AB528316 DQ891197 DQ894380 TSC_hg19_v1_chr3_-_9005128 AY004333 BC001302 AK222771 AF169796 AK023075 NM_020165	-286290	-	TSC_hg19_v1_chr3_+_9404750 NM_001114092 NM_015453 AK023263 BC001622 AK001680 BC010421	113355	+	TSC_hg19_v1_chr3_-_9438337 BC036698 BC052961	146918	-	AK093640 TSC_hg19_v1_chr3_-_9439124 AL110136	147727	-	NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AB007871|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK094355|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF427144|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF464189|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##DQ891197|RAD18|56852|RAD18 homolog (S. cerevisiae)##DQ894380|RAD18|56852|RAD18 homolog (S. cerevisiae)##AY004333|RAD18|56852|RAD18 homolog (S. cerevisiae)##BC001302|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK222771|RAD18|56852|RAD18 homolog (S. cerevisiae)##AF169796|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK023075|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_020165|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_001114092|THUMPD3|25917|THUMP domain containing 3##NM_015453|THUMPD3|25917|THUMP domain containing 3##AK023263|THUMPD3|25917|THUMP domain containing 3##BC001622|THUMPD3|25917|THUMP domain containing 3##AK001680|THUMPD3|25917|THUMP domain containing 3##BC010421|THUMPD3|25917|THUMP domain containing 3##BC036698|LOC440944|440944|uncharacterized LOC440944##BC052961|LOC440944|440944|uncharacterized LOC440944##AK093640|LOC440944|440944|uncharacterized LOC440944##AL110136|LOC440944|440944|uncharacterized LOC440944	0.0	
chr10	11146821	11146960	reg1033518.p1	4.257	+	U69546 TSC_hg19_v1_chr10_+_11060121	-86774	+	AF090694 TSC_hg19_v1_chr10_+_11060072	-86819	+	TSC_hg19_v1_chr10_+_11059882 AK314087 NM_006561 BC036391	-87000	+	AK299983 NM_001025076 NM_001083591 TSC_hg19_v1_chr10_+_11207008	60079	+	AK297313 TSC_hg19_v1_chr10_+_11207057 AK299992 AF036956 AK293164 AF432906	60206	+	TSC_hg19_v1_chr10_+_11207244 AK316354	60355	+	U69546|CELF2|10659|CUGBP, Elav-like family member 2##AF090694|CELF2|10659|CUGBP, Elav-like family member 2##AK314087|CELF2|10659|CUGBP, Elav-like family member 2##NM_006561|CELF2|10659|CUGBP, Elav-like family member 2##BC036391|CELF2|10659|CUGBP, Elav-like family member 2##AK299983|CELF2|10659|CUGBP, Elav-like family member 2##NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2##NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2##AK297313|CELF2|10659|CUGBP, Elav-like family member 2##AK299992|CELF2|10659|CUGBP, Elav-like family member 2##AF036956|CELF2|10659|CUGBP, Elav-like family member 2##AK293164|CELF2|10659|CUGBP, Elav-like family member 2##AF432906|CELF2|10659|CUGBP, Elav-like family member 2##AK316354|CELF2|10659|CUGBP, Elav-like family member 2	0.0	
chr1	235256715	235256869	reg1010986.p1	4.257	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-361018	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-511546	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-512934	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	35297	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	35439	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	67771	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.026391	
chr13	51723254	51723365	reg1028938.p1	4.257	+	BC001397 BC005088 BC007332 BC010174 TSC_hg19_v1_chr13_+_51484193	-239152	+	TSC_hg19_v1_chr13_+_51483926 AK021774 AK223340 BC036744	-239355	+	TSC_hg19_v1_chr13_+_51483905 AY764036	-239405	+	TSC_hg19_v1_chr13_+_51796507 BC034497 NM_001242312 NM_145019 AK055269 AK096364 BC051771 AB527542 CU690842	73207	+	AX772926 NM_001101320 AM402969	191886	+	AF097645 BC039829 BC018725 BC013358 BC032386 TSC_hg19_v1_chr13_-_52027173 AK296801 AK304218	303844	-	BC001397|RNASEH2B|79621|ribonuclease H2, subunit B##BC005088|RNASEH2B|79621|ribonuclease H2, subunit B##BC007332|RNASEH2B|79621|ribonuclease H2, subunit B##BC010174|RNASEH2B|79621|ribonuclease H2, subunit B##AK021774|RNASEH2B|79621|ribonuclease H2, subunit B##AK223340|RNASEH2B|79621|ribonuclease H2, subunit B##BC036744|RNASEH2B|79621|ribonuclease H2, subunit B##AY764036|RNASEH2B|79621|ribonuclease H2, subunit B##BC034497|FAM124A|220108|family with sequence similarity 124A##NM_001242312|FAM124A|220108|family with sequence similarity 124A##NM_145019|FAM124A|220108|family with sequence similarity 124A##AK055269|FAM124A|220108|family with sequence similarity 124A##AK096364|FAM124A|220108|family with sequence similarity 124A##BC051771|FAM124A|220108|family with sequence similarity 124A##AX772926|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##NM_001101320|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AM402969|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AF097645|INTS6|26512|integrator complex subunit 6##BC039829|INTS6|26512|integrator complex subunit 6##BC018725|INTS6|26512|integrator complex subunit 6##BC013358|INTS6|26512|integrator complex subunit 6##BC032386|INTS6|26512|integrator complex subunit 6##AK296801|INTS6|26512|integrator complex subunit 6##AK304218|INTS6|26512|integrator complex subunit 6	0.114152	
chr15	67432817	67432997	reg1035509.p2	4.257	+	AK298139 NM_001145103	-2549	+	NM_001145102 AK316017	-14784	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	-74506	+	NM_001145104 AK300614 AK301348	25589	+	AB528136 AM393020 AM393411 CR533540 CU691322 TSC_hg19_v1_chr15_-_67547000 AK021568 AL136715 BC058886 BC047026 BC035852 NM_024666	114113	-	TSC_hg19_v1_chr15_+_67547171 BC039463 NM_001031715 NM_022784 AY014282 AK292478 AK304303 BC031041 BC048964 BC039292 AK022538 CU690588	114267	+	AK298139|SMAD3|4088|SMAD family member 3##NM_001145103|SMAD3|4088|SMAD family member 3##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3##NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3##AM393020|AAGAB|79719|alpha- and gamma-adaptin binding protein##AM393411|AAGAB|79719|alpha- and gamma-adaptin binding protein##CR533540|AAGAB|79719|alpha- and gamma-adaptin binding protein##AK021568|AAGAB|79719|alpha- and gamma-adaptin binding protein##AL136715|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC058886|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC047026|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC035852|AAGAB|79719|alpha- and gamma-adaptin binding protein##NM_024666|AAGAB|79719|alpha- and gamma-adaptin binding protein##BC039463|IQCH|64799|IQ motif containing H##NM_001031715|IQCH|64799|IQ motif containing H##NM_022784|IQCH|64799|IQ motif containing H##AY014282|IQCH|64799|IQ motif containing H##AK292478|IQCH|64799|IQ motif containing H##AK304303|IQCH|64799|IQ motif containing H##BC031041|IQCH|64799|IQ motif containing H##BC048964|IQCH|64799|IQ motif containing H##BC039292|IQCH|64799|IQ motif containing H##AK022538|IQCH|64799|IQ motif containing H	0.0	
chr16	72042311	72042491	reg1025901.p1	4.257	+	AY164485 NM_181536	-8525	-	TSC_hg19_v1_chr16_+_71929438 AK295066 AK301918 AK057902 AK293022 AK297088 AB097052 D79996 BC000430 BC004359 NM_014761 BC000116	-112958	+	TSC_hg19_v1_chr16_+_71929421 AK291388 AK297336 BC103745	-112987	+	AK292293 TSC_hg19_v1_chr16_+_72042642 NM_001361 BC065245	193	+	NM_001126102 NM_005143 AK314700 BC107587 AK055872 BC017862 BC058031 BC070299 K01763 L29394 BC121124 BC121125 X00637 K00422	46122	+	NM_020995	54723	+	AY164485|PKD1L3|342372|polycystic kidney disease 1-like 3##NM_181536|PKD1L3|342372|polycystic kidney disease 1-like 3##AK295066|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK301918|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK057902|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK293022|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK297088|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AB097052|IST1|9798|increased sodium tolerance 1 homolog (yeast)##D79996|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC000430|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC004359|IST1|9798|increased sodium tolerance 1 homolog (yeast)##NM_014761|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC000116|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK291388|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK297336|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC103745|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK292293|DHODH|1723|dihydroorotate dehydrogenase (quinone)##NM_001361|DHODH|1723|dihydroorotate dehydrogenase (quinone)##BC065245|DHODH|1723|dihydroorotate dehydrogenase (quinone)##NM_001126102|HP|3240|haptoglobin##NM_005143|HP|3240|haptoglobin##AK314700|HP|3240|haptoglobin##BC107587|HP|3240|haptoglobin##AK055872|HP|3240|haptoglobin##BC017862|HP|3240|haptoglobin##BC058031|HP|3240|haptoglobin##BC070299|HP|3240|haptoglobin##K01763|HP|3240|haptoglobin##L29394|HP|3240|haptoglobin##BC121124|HP|3240|haptoglobin##BC121125|HP|3240|haptoglobin##X00637|HP|3240|haptoglobin##K00422|HP|3240|haptoglobin##NM_020995|HPR|3250|haptoglobin-related protein	0.0	
chr19	41903567	41903711	reg1026254.p2	4.257	+	TSC_hg19_v1_chr19_-_41903262 AB463622 BC007742 AK314941 AF281134 NM_020158 BC107696 AF285785	-340	-	NM_001042595 BC063705	-20457	+	NM_001098821 NM_001098822 NM_001098823 NM_001098824	-21202	+	NM_000709 NM_001164783 TSC_hg19_v1_chr19_+_41903714	65	+	TSC_hg19_v1_chr19_+_41903722 AL833143 BC023983 Z14093	81	+	TSC_hg19_v1_chr19_+_41903725 AK313300 AK298188 BC007878 BC008933 AB209828 J04474	93	+	BC007742|EXOSC5|56915|exosome component 5##AK314941|EXOSC5|56915|exosome component 5##AF281134|EXOSC5|56915|exosome component 5##NM_020158|EXOSC5|56915|exosome component 5##BC107696|EXOSC5|56915|exosome component 5##AF285785|EXOSC5|56915|exosome component 5##NM_001042595|TMEM91|641649|transmembrane protein 91##BC063705|TMEM91|641649|transmembrane protein 91##NM_001098821|TMEM91|641649|transmembrane protein 91##NM_001098822|TMEM91|641649|transmembrane protein 91##NM_001098823|TMEM91|641649|transmembrane protein 91##NM_001098824|TMEM91|641649|transmembrane protein 91##NM_000709|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##NM_001164783|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##AL833143|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##BC023983|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##Z14093|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##AK313300|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##AK298188|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##BC007878|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##BC008933|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##AB209828|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##J04474|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	0.0	
chr4	27002563	27002671	reg1033074.p1	4.257	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-140077	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-416937	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-510632	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3719382	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3719577	+	TSC_hg19_v1_chr4_+_30722465 AB006756	3719842	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.010995	
chr11	94495472	94495610	reg1036145.p1	4.256	+	NM_152431 AB079366 AK093475 AX748151 BC031060 DQ891240 DQ894425 AB590313 CU689100	-194963	+	TSC_hg19_v1_chr11_+_94277605 M58596	-217942	+	AK293616 NM_002033 TSC_hg19_v1_chr11_+_94277086 M58597 BC136373 BC136374	-218462	+	TSC_hg19_v1_chr11_+_94501528 BX648729 NM_130847 AK093699 AX748266 AF453742 BC037539 AK074084 AM393663	6048	+	TSC_hg19_v1_chr11_-_94706721 AK309042 AF110775 AF161497 AK225956 AK314900 BC032629 AJ250393 BC040946 BC006975	211181	-	TSC_hg19_v1_chr11_-_94706742 NM_016403	211216	-	NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)##AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)##AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)##BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##AK293616|PIWIL4|143689|piwi-like 4 (Drosophila)##NM_002033|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58597|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136373|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136374|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BX648729|AMOTL1|154810|angiomotin like 1##NM_130847|AMOTL1|154810|angiomotin like 1##AK093699|AMOTL1|154810|angiomotin like 1##AF453742|AMOTL1|154810|angiomotin like 1##BC037539|AMOTL1|154810|angiomotin like 1##AK074084|AMOTL1|154810|angiomotin like 1##AM393663|AMOTL1|154810|angiomotin like 1##AK309042|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AF110775|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AF161497|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AK225956|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AK314900|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC032629|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##AJ250393|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC040946|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##BC006975|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)##NM_016403|CWC15|51503|CWC15 spliceosome-associated protein homolog (S. cerevisiae)	1.032506	CTCF.p2:-19:0.431	CTCF.p2:58:0.601
chr14	23235977	23236149	reg1031125.p2	4.256	+	BC112331 NM_005015 TSC_hg19_v1_chr14_+_23235896 AK294849 AK298249 BC001669 X80695 BX248295 BX248001	-218	+	TSC_hg19_v1_chr14_+_23067208 AK022878 NM_022060 AX721056 BC024779 AK298127 AK301315 AK293198	-168874	+	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	-177929	-	TSC_hg19_v1_chr14_-_23284568 AK025377	48516	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	48569	-	AB020532 BX161519 NM_001126105	48995	-	BC112331|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##NM_005015|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK294849|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK298249|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BC001669|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##X80695|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248295|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248001|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK022878|ABHD4|63874|abhydrolase domain containing 4##NM_022060|ABHD4|63874|abhydrolase domain containing 4##BC024779|ABHD4|63874|abhydrolase domain containing 4##AK298127|ABHD4|63874|abhydrolase domain containing 4##AK301315|ABHD4|63874|abhydrolase domain containing 4##AK293198|ABHD4|63874|abhydrolase domain containing 4##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1##AK025377|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AB020532|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX161519|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126105|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	0.0	
chr17	42084581	42084729	reg1031663.p1	4.256	+	AK314432 AK300923 BC111713 AY116538 NM_153006 AK074407	-2637	+	BC041057 NM_004160	-2819	-	X00491 NM_002722	-64839	-	CU675657 AB097008 AK130810 AK313855 TSC_hg19_v1_chr17_-_42092332 BC007438 NM_032376 AK172826 AK294237	7711	-	TSC_hg19_v1_chr17_-_42143970 AK300637 AL832076	59311	-	TSC_hg19_v1_chr17_-_42144008 AK055218 BC044587 BC105288	59361	-	AK314432|NAGS|162417|N-acetylglutamate synthase##AK300923|NAGS|162417|N-acetylglutamate synthase##BC111713|NAGS|162417|N-acetylglutamate synthase##AY116538|NAGS|162417|N-acetylglutamate synthase##NM_153006|NAGS|162417|N-acetylglutamate synthase##AK074407|NAGS|162417|N-acetylglutamate synthase##BC041057|PYY|5697|peptide YY##NM_004160|PYY|5697|peptide YY##X00491|PPY|5539|pancreatic polypeptide##NM_002722|PPY|5539|pancreatic polypeptide##AB097008|TMEM101|84336|transmembrane protein 101##AK130810|TMEM101|84336|transmembrane protein 101##AK313855|TMEM101|84336|transmembrane protein 101##BC007438|TMEM101|84336|transmembrane protein 101##NM_032376|TMEM101|84336|transmembrane protein 101##AK172826|TMEM101|84336|transmembrane protein 101##AK294237|TMEM101|84336|transmembrane protein 101##AK300637|LSM12|124801|LSM12 homolog (S. cerevisiae)##AL832076|LSM12|124801|LSM12 homolog (S. cerevisiae)##AK055218|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC044587|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC105288|LSM12|124801|LSM12 homolog (S. cerevisiae)	0.0	
chr17	75455233	75455405	reg1029455.p2	4.256	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-7930	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-8537	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	-8674	+	AK056495 NM_001113495	16005	+	TSC_hg19_v1_chr17_+_75543021 AK096234	87701	+	BC039479 NM_001142640 NM_018996	544963	+	AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C	0.0	
chr2	129226919	129227007	reg1031260.p2	4.256	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-150663	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-298916	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-378102	+	NM_032144 AL136727	1510272	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	1659895	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	1675648	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.962706	CTCF.p2:-3:0.963
chr6	3252002	3252149	reg1000724.p2	4.256	+	BT019930 CR456788 CU674662 BC063610 TSC_hg19_v1_chr6_-_3227888 AK308806 AK289433 AK297568 BC001352 NM_178012	-24204	-	AY159127 CR541958 CU674602 AB528583 DQ892343 DQ895718 BC001194 TSC_hg19_v1_chr6_-_3157779 BC018780 X79535 AK308772 AK312621 NM_001069	-94329	-	TSC_hg19_v1_chr6_+_3118961 AK297518 NM_004332 AK314909 AL832502 AJ617684 X81372	-133124	+	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	7083	+	TSC_hg19_v1_chr6_+_3259232 AK126623 AK095683	7164	+	TSC_hg19_v1_chr6_-_3272352 BC090851 BC022217	20355	-	BT019930|TUBB2B|347733|tubulin, beta 2B class IIb##CR456788|TUBB2B|347733|tubulin, beta 2B class IIb##BC063610|TUBB2B|347733|tubulin, beta 2B class IIb##AK308806|TUBB2B|347733|tubulin, beta 2B class IIb##AK289433|TUBB2B|347733|tubulin, beta 2B class IIb##AK297568|TUBB2B|347733|tubulin, beta 2B class IIb##BC001352|TUBB2B|347733|tubulin, beta 2B class IIb##NM_178012|TUBB2B|347733|tubulin, beta 2B class IIb##AY159127|TUBB2A|7280|tubulin, beta 2A class IIa##CR541958|TUBB2A|7280|tubulin, beta 2A class IIa##DQ892343|TUBB2A|7280|tubulin, beta 2A class IIa##DQ895718|TUBB2A|7280|tubulin, beta 2A class IIa##BC001194|TUBB2A|7280|tubulin, beta 2A class IIa##BC018780|TUBB2A|7280|tubulin, beta 2A class IIa##X79535|TUBB2A|7280|tubulin, beta 2A class IIa##AK312621|TUBB2A|7280|tubulin, beta 2A class IIa##NM_001069|TUBB2A|7280|tubulin, beta 2A class IIa##AK297518|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##NM_004332|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AK314909|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AL832502|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AJ617684|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##X81372|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##BC090851|SLC22A23|63027|solute carrier family 22, member 23##BC022217|SLC22A23|63027|solute carrier family 22, member 23	0.0	
chr10	112148037	112148217	reg1027865.p2	4.255	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-83427	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-83534	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-162306	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	109624	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	179365	+	AF067163 TSC_hg19_v1_chr10_+_112344155	195988	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.0	
chr11	119192452	119192546	reg1031703.p2	4.255	+	AB527309 EU832794 GQ129330 TSC_hg19_v1_chr11_-_119187841 BC006329 M28882 M29277 AF089868 BC056418 AK128335 AK291571 AK312430 NM_006500 AB209925	-4658	-	TSC_hg19_v1_chr11_+_119077024 BC132733 BC136463	-115459	+	TSC_hg19_v1_chr11_+_119076992 X57110 NM_005188	-115516	+	TSC_hg19_v1_chr11_+_119205234 BX648447 AK122642 BX647424 NM_032015	12732	+	AL110261 AB590791 TSC_hg19_v1_chr11_-_119211170	18603	-	TSC_hg19_v1_chr11_-_119211575 AF329841 AY358383 BC029485	19083	-	EU832794|MCAM|4162|melanoma cell adhesion molecule##GQ129330|MCAM|4162|melanoma cell adhesion molecule##M28882|MCAM|4162|melanoma cell adhesion molecule##M29277|MCAM|4162|melanoma cell adhesion molecule##AF089868|MCAM|4162|melanoma cell adhesion molecule##BC056418|MCAM|4162|melanoma cell adhesion molecule##AK128335|MCAM|4162|melanoma cell adhesion molecule##AK291571|MCAM|4162|melanoma cell adhesion molecule##AK312430|MCAM|4162|melanoma cell adhesion molecule##NM_006500|MCAM|4162|melanoma cell adhesion molecule##AB209925|MCAM|4162|melanoma cell adhesion molecule##BC132733|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##BC136463|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##X57110|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##NM_005188|CBL|867|Cas-Br-M (murine) ecotropic retroviral transforming sequence##BX648447|RNF26|79102|ring finger protein 26##AK122642|RNF26|79102|ring finger protein 26##BX647424|RNF26|79102|ring finger protein 26##NM_032015|RNF26|79102|ring finger protein 26##AL110261|MFRP|83552|membrane frizzled-related protein##AF329841|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##AY358383|C1QTNF5|114902|C1q and tumor necrosis factor related protein 5##BC029485|MFRP|83552|membrane frizzled-related protein	0.016554	
chr17	2286900	2286976	reg1000236.p3	4.255	+	TSC_hg19_v1_chr17_+_2240796 NM_014853 AB007857 NM_001098509 BC039204 AK294955 AB275762 AB385325 AB449878 AK304263	-46036	+	NM_018128 AB037822	-46200	-	AB463326 TSC_hg19_v1_chr17_-_2239749 AK026565	-47194	-	X96401 NM_020310 TSC_hg19_v1_chr17_-_2304355 AK291596	17378	-	TSC_hg19_v1_chr17_-_2415189 BX647255 AK294547 BC050603 BC001213 AL832612 AK027410 AK296464 NM_024086	128207	-	TSC_hg19_v1_chr17_+_2496944 NM_000430 L13386	210032	+	NM_014853|SGSM2|9905|small G protein signaling modulator 2##AB007857|SGSM2|9905|small G protein signaling modulator 2##NM_001098509|SGSM2|9905|small G protein signaling modulator 2##BC039204|SGSM2|9905|small G protein signaling modulator 2##AK294955|SGSM2|9905|small G protein signaling modulator 2##AB275762|SGSM2|9905|small G protein signaling modulator 2##AB449878|SGSM2|9905|small G protein signaling modulator 2##AK304263|SGSM2|9905|small G protein signaling modulator 2##NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AK026565|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##X96401|MNT|4335|MAX binding protein##NM_020310|MNT|4335|MAX binding protein##AK291596|MNT|4335|MAX binding protein##BX647255|METTL16|79066|methyltransferase like 16##AK294547|METTL16|79066|methyltransferase like 16##BC050603|METTL16|79066|methyltransferase like 16##BC001213|METTL16|79066|methyltransferase like 16##AL832612|METTL16|79066|methyltransferase like 16##AK027410|METTL16|79066|methyltransferase like 16##AK296464|METTL16|79066|methyltransferase like 16##NM_024086|METTL16|79066|methyltransferase like 16##NM_000430|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13386|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	0.0	
chr17	39835560	39835666	reg1027755.p2	4.255	+	AB528302 DQ891101 DQ894283 BC072018 BC072019 BC011901 X62571 BC000159 BC056421 AK304373 AK095342 NM_000422	-54792	-	S79867 DQ891307 DQ896818 AF061812 BC039169 AK290853 AK309296 AK309278 NM_005557	-66605	-	BT007186 AB527765 DQ890733 DQ892997 DQ893905 BC042437 BC002690 BC019097 BC094830 AK309280 NM_000526	-92498	-	NM_005801 TSC_hg19_v1_chr17_+_39845138 AL050005 AK311862	9520	+	AK311209 TSC_hg19_v1_chr17_+_39845141	9528	+	TSC_hg19_v1_chr17_+_39845142 BC005118 L26247 AF083441 BC008710 AF100737 AJ012375 DQ896700 EU176404 BT006645 CR457051	9603	+	DQ891101|KRT17|3872|keratin 17##DQ894283|KRT17|3872|keratin 17##BC072018|KRT17|3872|keratin 17##BC072019|KRT17|3872|keratin 17##BC011901|KRT17|3872|keratin 17##X62571|KRT17|3872|keratin 17##BC000159|KRT17|3872|keratin 17##BC056421|KRT17|3872|keratin 17##AK304373|KRT17|3872|keratin 17##AK095342|KRT17|3872|keratin 17##NM_000422|KRT17|3872|keratin 17##S79867|KRT16|3868|keratin 16##DQ891307|KRT16|3868|keratin 16##DQ896818|KRT16|3868|keratin 16##AF061812|KRT16|3868|keratin 16##BC039169|KRT16|3868|keratin 16##AK290853|KRT16|3868|keratin 16##NM_005557|KRT16|3868|keratin 16##BT007186|KRT14|3861|keratin 14##DQ890733|KRT14|3861|keratin 14##DQ892997|KRT14|3861|keratin 14##DQ893905|KRT14|3861|keratin 14##BC042437|KRT14|3861|keratin 14##BC002690|KRT14|3861|keratin 14##BC019097|KRT14|3861|keratin 14##BC094830|KRT14|3861|keratin 14##NM_000526|KRT14|3861|keratin 14##NM_005801|EIF1|10209|eukaryotic translation initiation factor 1##AL050005|EIF1|10209|eukaryotic translation initiation factor 1##AK311862|EIF1|10209|eukaryotic translation initiation factor 1##AK311209|EIF1|10209|eukaryotic translation initiation factor 1##BC005118|EIF1|10209|eukaryotic translation initiation factor 1##L26247|EIF1|10209|eukaryotic translation initiation factor 1##AF083441|EIF1|10209|eukaryotic translation initiation factor 1##BC008710|EIF1|10209|eukaryotic translation initiation factor 1##AF100737|EIF1|10209|eukaryotic translation initiation factor 1##AJ012375|EIF1|10209|eukaryotic translation initiation factor 1##DQ896700|EIF1|10209|eukaryotic translation initiation factor 1##EU176404|EIF1|10209|eukaryotic translation initiation factor 1##BT006645|EIF1|10209|eukaryotic translation initiation factor 1##CR457051|EIF1|10209|eukaryotic translation initiation factor 1	0.307859	CTCF.p2:5:0.308
chr17	46056044	46056224	reg1001262.p2	4.255	+	AF343090 TSC_hg19_v1_chr17_+_46048487 AF110322 AK225274 BC072435 AB062433 BC009957	-7640	+	TSC_hg19_v1_chr17_+_46048471 AF217982 AK023722	-7665	+	AK223387 NM_176096 TSC_hg19_v1_chr17_+_46048452	-7702	+	TSC_hg19_v1_chr17_-_46115160 AB590254 DQ893053 DQ896301 AB047849 BC015924 AB037938 NM_016429	59016	-	TSC_hg19_v1_chr17_+_46125712 NM_003204 BC010623 AK090459	69565	+	AL833530 TSC_hg19_v1_chr17_+_46125724	69590	+	AF343090|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF110322|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK225274|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC072435|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AB062433|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC009957|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF217982|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK023722|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK223387|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##NM_176096|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##DQ893053|COPZ2|51226|coatomer protein complex, subunit zeta 2##DQ896301|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB047849|COPZ2|51226|coatomer protein complex, subunit zeta 2##BC015924|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB037938|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_016429|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	0.100047	
chr17	75450051	75450142	reg1029060.p2	4.255	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-2707	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-3314	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	-3451	+	AK056495 NM_001113495	21228	+	TSC_hg19_v1_chr17_+_75543021 AK096234	92924	+	BC039479 NM_001142640 NM_018996	550186	+	AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C	0.0	
chr2	206869121	206869222	reg1029851.p2	4.255	+	TSC_hg19_v1_chr2_+_206547371 AK290934	-321810	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	-321993	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-1458452	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	81740	-	AK295987 NM_001199984	154746	-	X61100 AK098395 BC018900 BC022368 TSC_hg19_v1_chr2_-_207024145 AK300585 BC030833 AK295705 AK295966 AK298320 BC004133 NM_001199981 NM_001199982 NM_001199983 NM_005006	155001	-	AK290934|NRP2|8828|neuropilin 2##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D##AK295987|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199984|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	0.0	
chr3	151008603	151008733	reg1037222.p1	4.255	+	BC034989 D13626 NM_014879	-12477	-	AK289617 NM_001081455	-41719	-	AF002986 BC036815 NM_013308	-87702	-	AF237763 BC112941 BC117565 AB031548 BC132888 BC132890 AK027784 NM_023915	25906	-	BC041116 JF810883 BC029363 AK313208 NM_176894	38654	-	AF313449 AF321815 NM_176876	49843	-	BC034989|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##D13626|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_014879|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##AK289617|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_001081455|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##AF002986|GPR171|29909|G protein-coupled receptor 171##BC036815|GPR171|29909|G protein-coupled receptor 171##NM_013308|GPR171|29909|G protein-coupled receptor 171##AF237763|GPR87|53836|G protein-coupled receptor 87##BC112941|GPR87|53836|G protein-coupled receptor 87##BC117565|GPR87|53836|G protein-coupled receptor 87##AB031548|GPR87|53836|G protein-coupled receptor 87##BC132888|GPR87|53836|G protein-coupled receptor 87##BC132890|GPR87|53836|G protein-coupled receptor 87##AK027784|GPR87|53836|G protein-coupled receptor 87##NM_023915|GPR87|53836|G protein-coupled receptor 87##BC041116|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##BC029363|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##AK313208|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##NM_176894|P2RY13|53829|purinergic receptor P2Y, G-protein coupled, 13##AF313449|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##AF321815|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12##NM_176876|P2RY12|64805|purinergic receptor P2Y, G-protein coupled, 12	0.952679	CTCF.p2:-4:0.953
chr3	184002699	184002791	reg1034532.p1	4.255	+	BC142950 NM_001037324 NM_001100120 NM_001100121 TSC_hg19_v1_chr3_+_183993819 AB011176 AK296541 AF521189 AY359003 AF192531 AF428264 AK293713 BC146830 AB383918	-8877	+	TSC_hg19_v1_chr3_-_183979153 BC105077 BC105079 AY037149 NM_033259	-23469	-	TSC_hg19_v1_chr3_+_183967514 AF428263	-35228	+	TSC_hg19_v1_chr3_+_184017028 D78151 NM_002808 AL162014 AK315474 AK297256 BC002997	14265	+	TSC_hg19_v1_chr3_+_184017038 AB209843 BC002368 AB385107 BC007897 BT009736 X86446 U12596 CU675853	14351	+	TSC_hg19_v1_chr3_+_184032303 NM_001194946 NM_001194947 NM_198241 NM_198242 NM_198244	29534	+	BC142950|ECE2|9718|endothelin converting enzyme 2##NM_001037324|ECE2|9718|endothelin converting enzyme 2##NM_001100120|ECE2|9718|endothelin converting enzyme 2##NM_001100121|ECE2|9718|endothelin converting enzyme 2##AB011176|ECE2|9718|endothelin converting enzyme 2##AK296541|ECE2|9718|endothelin converting enzyme 2##AF521189|ECE2|9718|endothelin converting enzyme 2##AY359003|ECE2|9718|endothelin converting enzyme 2##AF192531|ECE2|9718|endothelin converting enzyme 2##AF428264|ECE2|9718|endothelin converting enzyme 2##AK293713|ECE2|9718|endothelin converting enzyme 2##BC146830|ECE2|9718|endothelin converting enzyme 2##BC105077|CAMK2N2|94032|calcium/calmodulin-dependent protein kinase II inhibitor 2##BC105079|CAMK2N2|94032|calcium/calmodulin-dependent protein kinase II inhibitor 2##AY037149|CAMK2N2|94032|calcium/calmodulin-dependent protein kinase II inhibitor 2##NM_033259|CAMK2N2|94032|calcium/calmodulin-dependent protein kinase II inhibitor 2##AF428263|ECE2|9718|endothelin converting enzyme 2##D78151|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##NM_002808|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##AL162014|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##AK315474|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##AK297256|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##BC002997|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##AB209843|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##BC002368|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##BC007897|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##BT009736|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##X86446|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##U12596|PSMD2|5708|proteasome (prosome, macropain) 26S subunit, non-ATPase, 2##NM_001194946|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1##NM_001194947|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1##NM_198241|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1##NM_198242|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1##NM_198244|EIF4G1|1981|eukaryotic translation initiation factor 4 gamma, 1	0.0	
chr7	99942810	99942990	reg1011952.p3	4.255	+	TSC_hg19_v1_chr7_+_99933808 AL834317	-9078	+	TSC_hg19_v1_chr7_+_99933747 AK056412 AK310352	-9145	+	AB103084 TSC_hg19_v1_chr7_-_99933502 BC038996 D38435 D38499 BC110395 BC044214 BC067809	-9359	-	AJ400845 NM_178238 AF161081	12731	+	AF161080 NM_013439 NM_178272 NM_178273 BC017812 TSC_hg19_v1_chr7_+_99971109 AJ400841	28196	+	TSC_hg19_v1_chr7_+_99971132 AJ400842 AJ400843 AK298731 AB590724 CU676074	28305	+	AL834317|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AK056412|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AK310352|PILRB|29990|paired immunoglobin-like type 2 receptor beta##BC038996|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38435|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38499|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC110395|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC044214|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC067809|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##AJ400845|PILRB|29990|paired immunoglobin-like type 2 receptor beta##NM_178238|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AF161081|PILRB|29990|paired immunoglobin-like type 2 receptor beta##AF161080|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_013439|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178272|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##NM_178273|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##BC017812|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400841|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400842|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AJ400843|PILRA|29992|paired immunoglobin-like type 2 receptor alpha##AK298731|PILRA|29992|paired immunoglobin-like type 2 receptor alpha	0.068252	
chr8	42034858	42035038	reg1030006.p1	4.255	+	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	-24415	+	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	-125449	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-280638	-	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	30140	-	AK289387 AK290575 NM_000930 NM_033011 TSC_hg19_v1_chr8_-_42065195	30246	-	TSC_hg19_v1_chr8_+_42128819 NM_001190720 NM_001242778 NM_001556	93860	+	NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue##AK289387|PLAT|5327|plasminogen activator, tissue##AK290575|PLAT|5327|plasminogen activator, tissue##NM_000930|PLAT|5327|plasminogen activator, tissue##NM_033011|PLAT|5327|plasminogen activator, tissue##NM_001190720|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001242778|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_001556|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta	0.0	
chr16	23874872	23874985	reg1024095.p1	4.254	+	AB587511 EU832791 GQ129253 TSC_hg19_v1_chr16_+_23847512	-27422	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	-27533	+	TSC_hg19_v1_chr16_+_23847321 BC036472	-27596	+	BC037899 NM_006539 AK095553	391946	+	AK055453 TSC_hg19_v1_chr16_+_24267474	392546	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	392770	+	EU832791|PRKCB|5579|protein kinase C, beta##GQ129253|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	0.0	
chr16	69029219	69029325	reg1032488.p1	4.254	+	TSC_hg19_v1_chr16_+_68877504 BC092500 AB051533 NM_024562 AB463318	-151767	+	TSC_hg19_v1_chr16_+_68771304 Z18923	-257961	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	-258027	+	AK291400 NM_001199280	110194	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	110868	+	AF234839 NM_005329	112170	+	BC092500|TMCO7|79613|transmembrane and coiled-coil domains 7##AB051533|TMCO7|79613|transmembrane and coiled-coil domains 7##NM_024562|TMCO7|79613|transmembrane and coiled-coil domains 7##Z18923|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3##AF234839|HAS3|3038|hyaluronan synthase 3##NM_005329|HAS3|3038|hyaluronan synthase 3	0.765977	CTCF.p2:-17:0.641
chr17	80260234	80260374	reg1034180.p2	4.254	+	TSC_hg19_v1_chr17_-_80231580 BC003558 BC015775 AK291758 AK295638 AK303365 NM_001893 NM_139062	-28724	-	TSC_hg19_v1_chr17_-_80231315 AB091044 AK296969	-29011	-	TSC_hg19_v1_chr17_-_80231267 AB209463 CU677441 CU678502 EU832350 EU832435 AB527595	-29051	-	BT006696 DQ890740 DQ892590 DQ893911 DQ895810 AK298096 AK310061 BC009293 BC013297 X06180 AK223465 AY935534 AY935535 AY935536 AY935537 AK310558 NM_006137	15120	-	TSC_hg19_v1_chr17_-_80291610 AK223068 BC017716	31309	-	AK312980 U77643 TSC_hg19_v1_chr17_-_80291643 AK223104	31342	-	BC003558|CSNK1D|1453|casein kinase 1, delta##BC015775|CSNK1D|1453|casein kinase 1, delta##AK291758|CSNK1D|1453|casein kinase 1, delta##AK295638|CSNK1D|1453|casein kinase 1, delta##AK303365|CSNK1D|1453|casein kinase 1, delta##NM_001893|CSNK1D|1453|casein kinase 1, delta##NM_139062|CSNK1D|1453|casein kinase 1, delta##AB091044|CSNK1D|1453|casein kinase 1, delta##AK296969|CSNK1D|1453|casein kinase 1, delta##AB209463|CSNK1D|1453|casein kinase 1, delta##EU832350|CSNK1D|1453|casein kinase 1, delta##EU832435|CSNK1D|1453|casein kinase 1, delta##BT006696|CD7|924|CD7 molecule##DQ890740|CD7|924|CD7 molecule##DQ892590|CD7|924|CD7 molecule##DQ893911|CD7|924|CD7 molecule##DQ895810|CD7|924|CD7 molecule##AK298096|CD7|924|CD7 molecule##AK310061|CD7|924|CD7 molecule##BC009293|CD7|924|CD7 molecule##BC013297|CD7|924|CD7 molecule##X06180|CD7|924|CD7 molecule##AK223465|CD7|924|CD7 molecule##AY935534|CD7|924|CD7 molecule##AY935535|CD7|924|CD7 molecule##AY935536|CD7|924|CD7 molecule##AY935537|CD7|924|CD7 molecule##AK310558|CD7|924|CD7 molecule##NM_006137|CD7|924|CD7 molecule##AK223068|SECTM1|6398|secreted and transmembrane 1##BC017716|SECTM1|6398|secreted and transmembrane 1##AK312980|SECTM1|6398|secreted and transmembrane 1##U77643|SECTM1|6398|secreted and transmembrane 1##AK223104|SECTM1|6398|secreted and transmembrane 1	0.012228	
chr19	47713873	47713961	reg1001852.p1	4.254	+	TSC_hg19_v1_chr19_+_47634184 AB385085 DQ891751 DQ894932 CU676224 AF110956 BT007290	-79695	+	TSC_hg19_v1_chr19_+_47634171 BC003611	-79756	+	TSC_hg19_v1_chr19_+_47634145 AK315624 AF090385 AF046025 AK090645	-79778	+	U82987 BC136481 TSC_hg19_v1_chr19_-_47734457 AF332558 NM_014417	20428	-	AB590880 AK298837 AF354654 AF354655 AF354656 NM_001127240 NM_001127241 NM_001127242	22023	-	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	45844	+	DQ891751|SAE1|10055|SUMO1 activating enzyme subunit 1##DQ894932|SAE1|10055|SUMO1 activating enzyme subunit 1##AF110956|SAE1|10055|SUMO1 activating enzyme subunit 1##BT007290|SAE1|10055|SUMO1 activating enzyme subunit 1##BC003611|SAE1|10055|SUMO1 activating enzyme subunit 1##AK315624|SAE1|10055|SUMO1 activating enzyme subunit 1##AF090385|SAE1|10055|SUMO1 activating enzyme subunit 1##AF046025|SAE1|10055|SUMO1 activating enzyme subunit 1##AK090645|SAE1|10055|SUMO1 activating enzyme subunit 1##U82987|BBC3|27113|BCL2 binding component 3##BC136481|BBC3|27113|BCL2 binding component 3##AF332558|BBC3|27113|BCL2 binding component 3##NM_014417|BBC3|27113|BCL2 binding component 3##AK298837|BBC3|27113|BCL2 binding component 3##AF354654|BBC3|27113|BCL2 binding component 3##AF354655|BBC3|27113|BCL2 binding component 3##AF354656|BBC3|27113|BCL2 binding component 3##NM_001127240|BBC3|27113|BCL2 binding component 3##NM_001127241|BBC3|27113|BCL2 binding component 3##NM_001127242|BBC3|27113|BCL2 binding component 3##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9	0.0	
chr22	20194475	20194571	reg1035190.p2	4.254	+	NM_001243537	-57093	-	TSC_hg19_v1_chr22_+_20119357 AY894890 BC053544 NM_001185024 NM_013373 AK131238	-75090	+	TSC_hg19_v1_chr22_+_20105145 AB587487 CU013156 CU013444	-89366	+	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	61244	-	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	113046	-	NM_001242313	183145	+	NM_001243537|LOC388849|388849|uncharacterized LOC388849##AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8##BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8##AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8##CU013156|RANBP1|5902|RAN binding protein 1##CU013444|RANBP1|5902|RAN binding protein 1##AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_001242313|TMEM191B|728229|transmembrane protein 191B	0.376304	CTCF.p2:26:0.358
chr3	5020350	5020510	reg1025300.p4	4.254	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-485234	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-485302	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-485399	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	686	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	751	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	924	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.0	
chr4	110354875	110355012	reg1017883.p2	4.254	+	TSC_hg19_v1_chr4_-_110354918 BC009800	0	-	TSC_hg19_v1_chr4_+_110354836 AJ131245	-96	+	AF293340 AF293341 NM_032518 NM_198721 TSC_hg19_v1_chr4_-_110223816	-131136	-	BC117135 BC143268 BC143269 BC143276 TSC_hg19_v1_chr4_+_110354970 NM_001042734 NM_006323	5	+	TSC_hg19_v1_chr4_+_110354993 BC040137 AK300278	232	+	TSC_hg19_v1_chr4_+_110481443 NM_017918 AK291098 BC002633 AK095936 AK311030	126474	+	BC009800|1/2-SBSRNA4|100533182|lncRNA_BC009800##AJ131245|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##AF293340|COL25A1|84570|collagen, type XXV, alpha 1##AF293341|COL25A1|84570|collagen, type XXV, alpha 1##NM_032518|COL25A1|84570|collagen, type XXV, alpha 1##NM_198721|COL25A1|84570|collagen, type XXV, alpha 1##BC117135|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143268|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143269|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143276|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_001042734|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_006323|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC040137|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##AK300278|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_017918|CCDC109B|55013|coiled-coil domain containing 109B##AK291098|CCDC109B|55013|coiled-coil domain containing 109B##BC002633|CCDC109B|55013|coiled-coil domain containing 109B##AK095936|CCDC109B|55013|coiled-coil domain containing 109B##AK311030|CCDC109B|55013|coiled-coil domain containing 109B	0.014206	
chr4	88072251	88072347	reg1002070.p2	4.254	+	TSC_hg19_v1_chr4_+_87968211 AF177238 AF177239	-104048	+	TSC_hg19_v1_chr4_+_87928422 L13773 BC114930 NM_005935 AK296243 L25050 AB385236	-143978	+	TSC_hg19_v1_chr4_+_87857481 L13743	-214816	+	BC041901 TSC_hg19_v1_chr4_-_88141661 BX640727 BX538173 NM_020803 CR749265 BX640744 BX647454 BC041384	69363	-	HQ258364 AY268355 BC112303 BC112305 AB073347 AK292784 AY186249 AY186250 NM_001136230 NM_178135 AY358575	171726	-	AB529195 CU690256 CU679009 AF273056 AY358553 TSC_hg19_v1_chr4_-_88312322 BC014327 BC021673	239972	-	AF177238|AFF1|4299|AF4/FMR2 family, member 1##AF177239|AFF1|4299|AF4/FMR2 family, member 1##L13773|AFF1|4299|AF4/FMR2 family, member 1##BC114930|AFF1|4299|AF4/FMR2 family, member 1##NM_005935|AFF1|4299|AF4/FMR2 family, member 1##AK296243|AFF1|4299|AF4/FMR2 family, member 1##L25050|AFF1|4299|AF4/FMR2 family, member 1##BC041901|KLHL8|57563|kelch-like 8 (Drosophila)##BX640727|KLHL8|57563|kelch-like 8 (Drosophila)##BX538173|KLHL8|57563|kelch-like 8 (Drosophila)##NM_020803|KLHL8|57563|kelch-like 8 (Drosophila)##CR749265|KLHL8|57563|kelch-like 8 (Drosophila)##BX640744|KLHL8|57563|kelch-like 8 (Drosophila)##BX647454|KLHL8|57563|kelch-like 8 (Drosophila)##BC041384|KLHL8|57563|kelch-like 8 (Drosophila)##HQ258364|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY268355|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112303|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##BC112305|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AB073347|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AK292784|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186249|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY186250|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_001136230|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##NM_178135|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AY358575|HSD17B13|345275|hydroxysteroid (17-beta) dehydrogenase 13##AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11	0.0	
chr1	191096131	191096221	reg1035507.p1	4.253	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	-649441	-	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-4298088	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-4446686	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	1031427	+	AY643711 NM_001039152	1189945	+	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	1448732	+	AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1	0.260706	CTCF.p2:-16:0.261
chr12	51686051	51686169	reg1031302.p2	4.253	+	BC120965 BC120966 BC008712 TSC_hg19_v1_chr12_-_51663988 NM_001033873 BC001400 AK001839 NM_001031628	-22025	-	TSC_hg19_v1_chr12_+_51632658 AB385271 CU677910 AK125855	-53438	+	TSC_hg19_v1_chr12_+_51632650 D31767 BC002334 BC007900 AK095963	-53475	+	TSC_hg19_v1_chr12_-_51717901 CU690454 AF146531	31758	-	TSC_hg19_v1_chr12_-_51717911 AK093638 AB032698 AK000783 AK225911 NM_016293	31811	-	TSC_hg19_v1_chr12_-_51717961 BC047686 AK314304	31870	-	BC120965|SMAGP|57228|small cell adhesion glycoprotein##BC120966|SMAGP|57228|small cell adhesion glycoprotein##BC008712|SMAGP|57228|small cell adhesion glycoprotein##NM_001033873|SMAGP|57228|small cell adhesion glycoprotein##BC001400|SMAGP|57228|small cell adhesion glycoprotein##AK001839|SMAGP|57228|small cell adhesion glycoprotein##NM_001031628|SMAGP|57228|small cell adhesion glycoprotein##AK125855|DAZAP2|9802|DAZ associated protein 2##D31767|DAZAP2|9802|DAZ associated protein 2##BC002334|DAZAP2|9802|DAZ associated protein 2##BC007900|DAZAP2|9802|DAZ associated protein 2##AK095963|DAZAP2|9802|DAZ associated protein 2##AF146531|BIN2|51411|bridging integrator 2##AK093638|BIN2|51411|bridging integrator 2##AB032698|BIN2|51411|bridging integrator 2##AK000783|BIN2|51411|bridging integrator 2##AK225911|BIN2|51411|bridging integrator 2##NM_016293|BIN2|51411|bridging integrator 2##BC047686|BIN2|51411|bridging integrator 2##AK314304|BIN2|51411|bridging integrator 2	0.0	
chr16	3020218	3020344	reg1030195.p1	4.253	+	TSC_hg19_v1_chr16_+_3019556 AK291373 AK054564 AK092173 AX747391 BC033703 AL832527 EU831903 EU831998 AY424282	-711	+	NM_152341 TSC_hg19_v1_chr16_+_3019348	-935	+	BC009383 NM_001253725 NM_001253726 NM_024507 NM_172229 AK075033 AK301953 AK027669 BC003533 AK223422 AB086355 AB086356 AB086357 AB086405 DQ896447	-5913	+	AK098452 TSC_hg19_v1_chr16_-_3030418 AK301926 AK303005 AK097642	10126	-	TSC_hg19_v1_chr16_-_3030479 NM_004203 NM_182687	10225	-	AK091002 NM_020982	42175	+	AK291373|PAQR4|124222|progestin and adipoQ receptor family member IV##AK054564|PAQR4|124222|progestin and adipoQ receptor family member IV##AK092173|PAQR4|124222|progestin and adipoQ receptor family member IV##BC033703|PAQR4|124222|progestin and adipoQ receptor family member IV##AL832527|PAQR4|124222|progestin and adipoQ receptor family member IV##EU831903|PAQR4|124222|progestin and adipoQ receptor family member IV##EU831998|PAQR4|124222|progestin and adipoQ receptor family member IV##AY424282|PAQR4|124222|progestin and adipoQ receptor family member IV##NM_152341|PAQR4|124222|progestin and adipoQ receptor family member IV##BC009383|KREMEN2|79412|kringle containing transmembrane protein 2##NM_001253725|KREMEN2|79412|kringle containing transmembrane protein 2##NM_001253726|KREMEN2|79412|kringle containing transmembrane protein 2##NM_024507|KREMEN2|79412|kringle containing transmembrane protein 2##NM_172229|KREMEN2|79412|kringle containing transmembrane protein 2##AK075033|KREMEN2|79412|kringle containing transmembrane protein 2##AK301953|KREMEN2|79412|kringle containing transmembrane protein 2##AK027669|KREMEN2|79412|kringle containing transmembrane protein 2##BC003533|KREMEN2|79412|kringle containing transmembrane protein 2##AK223422|KREMEN2|79412|kringle containing transmembrane protein 2##AB086355|KREMEN2|79412|kringle containing transmembrane protein 2##AB086356|KREMEN2|79412|kringle containing transmembrane protein 2##AB086357|KREMEN2|79412|kringle containing transmembrane protein 2##AB086405|KREMEN2|79412|kringle containing transmembrane protein 2##DQ896447|KREMEN2|79412|kringle containing transmembrane protein 2##AK098452|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK301926|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK303005|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK097642|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##NM_004203|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##NM_182687|PKMYT1|9088|protein kinase, membrane associated tyrosine/threonine 1##AK091002|CLDN9|9080|claudin 9##NM_020982|CLDN9|9080|claudin 9	0.456917	CTCF.p2:-10:0.409
chr3	90140888	90140985	reg1030669.p2	4.253	+	M83941 AF213460 BC026247 TSC_hg19_v1_chr3_+_89156840 AK291411 AB384708	-984086	+	AF213459 NM_005233 NM_182644 BC063282 TSC_hg19_v1_chr3_+_89156770	-984215	+	AL832398 NM_173824 TSC_hg19_v1_chr3_+_88199126 BC024188 AK297719 AK313547	-1941908	+	AB590252 DQ892389 DQ895602 TSC_hg19_v1_chr3_-_93692741 Y00692 AK292994	3551740	-	TSC_hg19_v1_chr3_-_93692932 BC015801 NM_000313	3551982	-	TSC_hg19_v1_chr3_+_93698998 BC073842 NM_001174150 NM_001174151 NM_144996 NM_182896 CR936753 BC094725 BC104033 BC104034 BC104035 BC104036 AK299284 BC031093 AK296994 BC062993 BC015439 CR936763 AL713789 CR936756	3558091	+	M83941|EPHA3|2042|EPH receptor A3##AF213460|EPHA3|2042|EPH receptor A3##BC026247|EPHA3|2042|EPH receptor A3##AK291411|EPHA3|2042|EPH receptor A3##AF213459|EPHA3|2042|EPH receptor A3##NM_005233|EPHA3|2042|EPH receptor A3##NM_182644|EPHA3|2042|EPH receptor A3##BC063282|EPHA3|2042|EPH receptor A3##AL832398|C3orf38|285237|chromosome 3 open reading frame 38##NM_173824|C3orf38|285237|chromosome 3 open reading frame 38##BC024188|C3orf38|285237|chromosome 3 open reading frame 38##AK297719|C3orf38|285237|chromosome 3 open reading frame 38##AK313547|C3orf38|285237|chromosome 3 open reading frame 38##DQ892389|PROS1|5627|protein S (alpha)##DQ895602|PROS1|5627|protein S (alpha)##Y00692|PROS1|5627|protein S (alpha)##AK292994|PROS1|5627|protein S (alpha)##BC015801|PROS1|5627|protein S (alpha)##NM_000313|PROS1|5627|protein S (alpha)##BC073842|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174150|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_001174151|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_144996|ARL13B|200894|ADP-ribosylation factor-like 13B##NM_182896|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936753|ARL13B|200894|ADP-ribosylation factor-like 13B##BC094725|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104033|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104034|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104035|ARL13B|200894|ADP-ribosylation factor-like 13B##BC104036|ARL13B|200894|ADP-ribosylation factor-like 13B##AK299284|ARL13B|200894|ADP-ribosylation factor-like 13B##BC031093|ARL13B|200894|ADP-ribosylation factor-like 13B##AK296994|ARL13B|200894|ADP-ribosylation factor-like 13B##BC062993|ARL13B|200894|ADP-ribosylation factor-like 13B##BC015439|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936763|ARL13B|200894|ADP-ribosylation factor-like 13B##AL713789|ARL13B|200894|ADP-ribosylation factor-like 13B##CR936756|ARL13B|200894|ADP-ribosylation factor-like 13B	0.025338	
chr11	72325110	72325291	reg1033341.p2	4.252	+	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	-179550	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	-179624	-	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	-179745	-	TSC_hg19_v1_chr11_-_72353458 AY495089 AK131525 AK092278 AX747449 NM_001143839 NM_001243784	28279	-	AY495087 NM_001146209	54907	-	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	60253	-	AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK131525|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK092278|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001143839|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001243784|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	0.0	
chr15	30698184	30698283	reg1033541.p1	4.252	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-12521	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-583610	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-583891	-	TSC_hg19_v1_chr15_+_30918372 BC071990	220153	+	BC105788 NM_001039841	220645	+	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	497841	+	BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1	0.864445	CTCF.p2:4:0.836
chr17	45364516	45364655	reg1028835.p3	4.252	+	TSC_hg19_v1_chr17_+_45331260 AK300424	-33327	+	AY826979 TSC_hg19_v1_chr17_+_45331224 AB587392 U95204	-33361	+	TSC_hg19_v1_chr17_+_45331192 BC127666 BC127667 J02703 NM_000212 M35999 M20311	-33401	+	BC044604 TSC_hg19_v1_chr17_+_45401141	36556	+	TSC_hg19_v1_chr17_+_45401357 NM_001195192 NM_152347 BC036407 BC037876	36747	+	TSC_hg19_v1_chr17_-_45569837 BC090855 BC067758	205259	-	AY826979|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##U95204|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127666|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127667|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##J02703|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##NM_000212|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M35999|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M20311|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC044604|C17orf57|124989|chromosome 17 open reading frame 57##NM_001195192|C17orf57|124989|chromosome 17 open reading frame 57##NM_152347|C17orf57|124989|chromosome 17 open reading frame 57##BC036407|C17orf57|124989|chromosome 17 open reading frame 57##BC037876|C17orf57|124989|chromosome 17 open reading frame 57##BC090855|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2##BC067758|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2	0.0	
chr22	29145165	29145332	reg1025752.p2	4.252	+	TSC_hg19_v1_chr22_-_29138399 AF217975	-6845	-	BC000004 TSC_hg19_v1_chr22_+_29138056 NM_172002 BC065569 CR456462 AY191719 AB528150 CU013013 CU013301	-7187	+	BC004207 AK289360 CR456418 NM_001005735 NM_007194 NM_145862 AK290754 AB164374	-7431	-	TSC_hg19_v1_chr22_+_29168630 AK289516 NM_173510	23396	+	TSC_hg19_v1_chr22_+_29168718 BC065549 BC053874 BC040488 AK302925	23451	+	TSC_hg19_v1_chr22_+_29168732 AK091133 AX746797 AK295140 CR456461 AB528096 CU013012 CU013300 CU691050	23531	+	AF217975|CHEK2|11200|checkpoint kinase 2##NM_172002|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##BC065569|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##CR456462|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##AY191719|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##BC004207|CHEK2|11200|checkpoint kinase 2##AK289360|CHEK2|11200|checkpoint kinase 2##CR456418|CHEK2|11200|checkpoint kinase 2##NM_001005735|CHEK2|11200|checkpoint kinase 2##NM_007194|CHEK2|11200|checkpoint kinase 2##NM_145862|CHEK2|11200|checkpoint kinase 2##AK290754|CHEK2|11200|checkpoint kinase 2##AK289516|CCDC117|150275|coiled-coil domain containing 117##NM_173510|CCDC117|150275|coiled-coil domain containing 117##BC065549|CCDC117|150275|coiled-coil domain containing 117##BC053874|CCDC117|150275|coiled-coil domain containing 117##BC040488|CCDC117|150275|coiled-coil domain containing 117##AK302925|CCDC117|150275|coiled-coil domain containing 117##AK091133|CCDC117|150275|coiled-coil domain containing 117##AK295140|CCDC117|150275|coiled-coil domain containing 117##CR456461|CCDC117|150275|coiled-coil domain containing 117	0.0	
chr2	86221408	86221494	reg1022842.p2	4.252	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-105365	-	AY152815 NM_001042437	-126659	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-240446	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	111532	-	NM_015425	111826	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	111890	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.0	
chr3	85616348	85616461	reg1031310.p1	4.252	+	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	-608275	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-3581102	+	TSC_hg19_v1_chr3_-_81810971 NM_000158	-3805462	-	AF538973 NM_153184	159227	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	1423847	-	BC094780 TSC_hg19_v1_chr3_-_87040272	1423866	-	AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##NM_000158|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)	0.921558	CTCF.p2:16:0.922
chr5	59678526	59678706	reg1009343.p1	4.252	+	NM_001104631	-488996	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	-614161	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	-614268	-	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	105288	-	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	105424	+	TSC_hg19_v1_chr5_-_59995928 AF490257	317300	-	NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AF490257|DEPDC1B|55789|DEP domain containing 1B	0.0	
chr6	114179904	114180084	reg1013262.p1	4.252	+	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	-1260	+	AK122906 NM_001013734	-1511463	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1604099	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	112278	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	112342	-	AF503292 NM_153612 BC093911 BC093913	204030	-	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	0.0	
chr1	149105944	149106061	reg1035355.p1	4.251	+	NM_001164261 NM_001164262	-299988	+	NM_001102663 AK290302 AY894562 AY894566	-366501	+	NM_001144032	-461992	+	BC073925 BC110793 TSC_hg19_v1_chr1_-_149399230 NM_001024599	293194	-	AB084917 NM_001135789 NM_001143883 NM_178230 BC130376 BC130378	447021	+	X14355 AK311303 NM_000566 X14356 AK291451 BC032634 AB527585 BC152383 CU689454 DQ890842 DQ893997 L03418	648270	+	NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001144032|PPIAL4E|730262|peptidylprolyl isomerase A (cyclophilin A)-like 4E##BC110793|HIST2H2BF|440689|histone cluster 2, H2bf##NM_001024599|HIST2H2BF|440689|histone cluster 2, H2bf##AB084917|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##NM_001135789|PPIAL4C|653598|peptidylprolyl isomerase A (cyclophilin A)-like 4C##NM_001143883|PPIAL4B|653505|peptidylprolyl isomerase A (cyclophilin A)-like 4B##NM_178230|PPIAL4A|164022|peptidylprolyl isomerase A (cyclophilin A)-like 4A##BC130376|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##BC130378|PPIAL4G|644591|peptidylprolyl isomerase A (cyclophilin A)-like 4G##X14355|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##NM_000566|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##X14356|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##AK291451|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC032634|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##BC152383|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ890842|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##DQ893997|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)##L03418|FCGR1A|2209|Fc fragment of IgG, high affinity Ia, receptor (CD64)	0.968636	CTCF.p2:-9:0.969
chr1	212782803	212782890	reg1024509.p2	4.251	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	-739	+	NM_001040619 NM_001206484 NM_001206488 NM_001674 TSC_hg19_v1_chr1_+_212782102 AK294296	-811	+	NM_001030287	-44171	+	NM_001206486 AB066566 AB078026 AB078027 AB528347 AY313926 AY313927 BT006996 CR450334 DQ892723 DQ895972 AB209032	5561	+	AK301981 NM_153606 BC035007	14955	+	AB463432 HQ258061 TSC_hg19_v1_chr1_-_212873132	90274	-	AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3##NM_001040619|ATF3|467|activating transcription factor 3##NM_001206484|ATF3|467|activating transcription factor 3##NM_001206488|ATF3|467|activating transcription factor 3##NM_001674|ATF3|467|activating transcription factor 3##AK294296|ATF3|467|activating transcription factor 3##NM_001030287|ATF3|467|activating transcription factor 3##NM_001206486|ATF3|467|activating transcription factor 3##AB066566|ATF3|467|activating transcription factor 3##AB078026|ATF3|467|activating transcription factor 3##AB078027|ATF3|467|activating transcription factor 3##AY313926|ATF3|467|activating transcription factor 3##AY313927|ATF3|467|activating transcription factor 3##BT006996|ATF3|467|activating transcription factor 3##CR450334|ATF3|467|activating transcription factor 3##DQ892723|ATF3|467|activating transcription factor 3##DQ895972|ATF3|467|activating transcription factor 3##AB209032|ATF3|467|activating transcription factor 3##AK301981|FAM71A|149647|family with sequence similarity 71, member A##NM_153606|FAM71A|149647|family with sequence similarity 71, member A##BC035007|FAM71A|149647|family with sequence similarity 71, member A##HQ258061|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3	0.087594	
chr12	94541446	94541626	reg1020366.p1	4.251	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-470353	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-575935	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-576716	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	968	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	311995	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	312106	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.0	
chr14	68749751	68749866	reg1034799.p1	4.251	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-463288	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-466509	-	AK315462 NM_152443	-581206	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	509912	-	NM_001244698 NM_004926	510822	-	NM_001244701 AB528867	513176	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr15	98721337	98721441	reg1038228.p1	4.251	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	-217438	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	-217470	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	-1394717	+	AK097062 AK097062 NM_182562	336221	-	TSC_hg19_v1_chr15_+_99191767 AB425196	470582	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	471367	+	BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor	0.303694	CTCF.p2:5:0.304
chr17	26708734	26708833	reg1030349.p2	4.251	+	TSC_hg19_v1_chr17_+_26699093 BC040429 AJ290445 BC122860	-9674	+	AY444166 TSC_hg19_v1_chr17_+_26699061	-9725	+	NM_015077 TSC_hg19_v1_chr17_+_26699029	-9776	+	TSC_hg19_v1_chr17_+_26711666 AK093615	2971	+	AK295883 TSC_hg19_v1_chr17_-_26733231 BC010691 AK054669 NM_001242366 NM_080669	24432	-	CU678258 TSC_hg19_v1_chr17_+_26794963	86120	+	BC040429|SARM1|23098|sterile alpha and TIR motif containing 1##AJ290445|SARM1|23098|sterile alpha and TIR motif containing 1##BC122860|SARM1|23098|sterile alpha and TIR motif containing 1##AY444166|SARM1|23098|sterile alpha and TIR motif containing 1##NM_015077|SARM1|23098|sterile alpha and TIR motif containing 1##AK093615|SARM1|23098|sterile alpha and TIR motif containing 1##AK295883|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##BC010691|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##AK054669|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##NM_001242366|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1##NM_080669|SLC46A1|113235|solute carrier family 46 (folate transporter), member 1	0.0	
chr19	58090355	58090492	reg1037667.p1	4.251	+	TSC_hg19_v1_chr19_-_58090280 AK000564	-142	-	CU674052 EU446818 TSC_hg19_v1_chr19_-_58090246 BC000130 NM_017879	-265	-	AB590451 EU831944 EU832039 TSC_hg19_v1_chr19_-_58071232 BC053858 BC034810 BX538032 AK312802 AK122867	-19280	-	AK128340 TSC_hg19_v1_chr19_+_58095512 AK092538 AX747588 BC103957 BC103958 BC103959 NM_001010879	5144	+	TSC_hg19_v1_chr19_+_58111252 AL832740 BC060865 NM_020880 AK096831	20847	+	TSC_hg19_v1_chr19_+_58125609 AK291763 BC053511 BC042636 BC011646	35197	+	AK000564|ZNF416|55659|zinc finger protein 416##EU446818|ZNF416|55659|zinc finger protein 416##BC000130|ZNF416|55659|zinc finger protein 416##NM_017879|ZNF416|55659|zinc finger protein 416##EU831944|ZNF550|162972|zinc finger protein 550##EU832039|ZNF550|162972|zinc finger protein 550##BC053858|ZNF550|162972|zinc finger protein 550##BC034810|ZNF550|162972|zinc finger protein 550##BX538032|ZNF550|162972|zinc finger protein 550##AK312802|ZNF550|162972|zinc finger protein 550##AK122867|ZNF550|162972|zinc finger protein 550##AK128340|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##AK092538|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##BC103957|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##BC103958|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##BC103959|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##NM_001010879|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##AL832740|ZNF530|348327|zinc finger protein 530##BC060865|ZNF530|348327|zinc finger protein 530##NM_020880|ZNF530|348327|zinc finger protein 530##AK096831|ZNF530|348327|zinc finger protein 530##AK291763|ZNF134|7693|zinc finger protein 134##BC042636|ZNF134|7693|zinc finger protein 134##BC011646|ZNF134|7693|zinc finger protein 134	0.415777	CTCF.p2:21:0.416
chr20	30795681	30795847	reg1035127.p1	4.251	+	TSC_hg19_v1_chr20_+_30795710 CU674282 AL832023	-33	+	D80002 TSC_hg19_v1_chr20_+_30795698	-66	+	TSC_hg19_v1_chr20_+_30795686 AK291033 AF375884 AK300810 AK303068 BC000582 NM_015352 NM_172236	-129	+	TSC_hg19_v1_chr20_+_30865453 NM_004798 AK302403 AB002357	69722	+	TSC_hg19_v1_chr20_+_30946303 NM_001164603 NM_015338 BC100280 BC064984 BC137278 BC137280 AJ438952	150406	+	TSC_hg19_v1_chr20_+_30946787 AK122923	151062	+	AL832023|POFUT1|23509|protein O-fucosyltransferase 1##D80002|POFUT1|23509|protein O-fucosyltransferase 1##AK291033|POFUT1|23509|protein O-fucosyltransferase 1##AF375884|POFUT1|23509|protein O-fucosyltransferase 1##AK300810|POFUT1|23509|protein O-fucosyltransferase 1##AK303068|POFUT1|23509|protein O-fucosyltransferase 1##BC000582|POFUT1|23509|protein O-fucosyltransferase 1##NM_015352|POFUT1|23509|protein O-fucosyltransferase 1##NM_172236|POFUT1|23509|protein O-fucosyltransferase 1##NM_004798|KIF3B|9371|kinesin family member 3B##AB002357|KIF3B|9371|kinesin family member 3B##NM_001164603|ASXL1|171023|additional sex combs like 1 (Drosophila)##NM_015338|ASXL1|171023|additional sex combs like 1 (Drosophila)##BC100280|ASXL1|171023|additional sex combs like 1 (Drosophila)##BC064984|ASXL1|171023|additional sex combs like 1 (Drosophila)##BC137278|ASXL1|171023|additional sex combs like 1 (Drosophila)##BC137280|ASXL1|171023|additional sex combs like 1 (Drosophila)##AJ438952|ASXL1|171023|additional sex combs like 1 (Drosophila)##AK122923|ASXL1|171023|additional sex combs like 1 (Drosophila)	0.0	
chr6	138243176	138243290	reg1028710.p2	4.251	+	TSC_hg19_v1_chr6_-_138189314 AK124173	-53883	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-54696	+	BC051352 AK096362 NM_175747	-427708	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	185335	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	239903	+	BC069109 NM_021635 AF189269 AF189270	296393	-	AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1	0.824711	CTCF.p2:16:0.825
chr6_ssto_hap7	1782266	1782372	reg1033850.p1	4.251	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.01334	
chrX	129016402	129016568	reg1035211.p2	4.251	+	TSC_hg19_v1_chrX_-_128977856 AL161962 AK096967 AF151847 AY358558 BC006200 BC012826 BC003128 AK001112 AY952881 NM_016032	-38657	-	AK001524 BC000035 AB209807 TSC_hg19_v1_chrX_-_128977481 NM_001008222	-39060	-	TSC_hg19_v1_chrX_+_128913898 AK314869 AK292023 BC051881 AL049683 AB528892	-102501	+	TSC_hg19_v1_chrX_+_129040144 NM_001166221 NM_006649 AK291918 AK298578 BC009649 BC001149 AK304563 BC014987 AF039694 AB590128 CU679427 DQ892549 DQ895760	23646	+	NM_021946 TSC_hg19_v1_chrX_+_129139243 AK074089	122721	+	TSC_hg19_v1_chrX_-_129244438 U32645	227959	-	AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK314869|SASH3|54440|SAM and SH3 domain containing 3##AK292023|SASH3|54440|SAM and SH3 domain containing 3##BC051881|SASH3|54440|SAM and SH3 domain containing 3##AL049683|SASH3|54440|SAM and SH3 domain containing 3##NM_001166221|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_006649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK291918|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK298578|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC009649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC001149|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK304563|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC014987|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ892549|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ895760|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_021946|BCORL1|63035|BCL6 corepressor-like 1##AK074089|BCORL1|63035|BCL6 corepressor-like 1##U32645|ELF4|2000|E74-like factor 4 (ets domain transcription factor)	0.228016	CTCF.p2:68:0.228
chr10	31608409	31608505	reg1022505.p3	4.250	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-324	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-500	-	TSC_hg19_v1_chr10_+_31607451 BX647794	-1021	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	1632	+	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	609267	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	609328	-	NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.0	
chr13	32989296	32989392	reg1032071.p2	4.250	+	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	-99727	+	BC146956 BC146965 NM_001136571	-103255	-	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	-383903	+	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	13014	-	Z36834 TSC_hg19_v1_chr13_-_33112933 BC010643 U50532 AL049783 AK298546 AK312924 NM_014887 NM_033111	123581	-	TSC_hg19_v1_chr13_+_33160588 NM_015032	171219	+	NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1##Z36834|N4BP2L2|10443|NEDD4 binding protein 2-like 2##BC010643|N4BP2L2|10443|NEDD4 binding protein 2-like 2##U50532|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AL049783|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK298546|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK312924|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_014887|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_033111|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_015032|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.32958	CTCF.p2:0:0.330
chr18	77195901	77196082	reg1028207.p1	4.250	+	TSC_hg19_v1_chr18_+_77160328 NM_172387 NM_172389 U59736 AK293760 U80918 X99829 EU887560 EU887562 EU887564 EU887566	-35674	+	TSC_hg19_v1_chr18_+_77155967 U08015 BC104753 BC112243 BC143457 EU887559 EU887561 EU887563 EU887565	-39896	+	U80919 TSC_hg19_v1_chr18_+_77155946	-40045	+	BC045628 TSC_hg19_v1_chr18_+_77253425	57389	+	TSC_hg19_v1_chr18_-_77439359 AK002023	243322	-	TSC_hg19_v1_chr18_-_77439740 AK098581	243750	-	NM_172387|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172389|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U59736|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK293760|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80918|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887560|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887562|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887564|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887566|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U08015|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC104753|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC112243|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC143457|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887559|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887561|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887563|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887565|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80919|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK098581|FLJ25715|284241|uncharacterized protein FLJ25715	0.0	
chr19	58892063	58892179	reg1025640.p2	4.250	+	BC118983 BC125273 AK124712 AK125350 TSC_hg19_v1_chr19_-_58874199 AK126727 AK172804 AK131209 NM_001207009 NM_198458	-17939	-	TSC_hg19_v1_chr19_-_58864830 AK289417 AF414429 AK055885 AB073611 NM_130786	-27279	-	BX537419 TSC_hg19_v1_chr19_-_58858950 AK056201	-33172	-	TSC_hg19_v1_chr19_-_58892398 BC029960 NM_001129730 NM_138466	295	-	TSC_hg19_v1_chr19_+_58898635 AK223106 AK311938 D28455 NM_001009 BC015405 BC018828 BC018151 BC035830 U14970	6531	+	NM_001195135	15335	+	BC118983|ZNF497|162968|zinc finger protein 497##BC125273|ZNF497|162968|zinc finger protein 497##AK126727|ZNF497|162968|zinc finger protein 497##AK131209|ZNF497|162968|zinc finger protein 497##NM_001207009|ZNF497|162968|zinc finger protein 497##NM_198458|ZNF497|162968|zinc finger protein 497##AK289417|A1BG|1|alpha-1-B glycoprotein##AF414429|A1BG|1|alpha-1-B glycoprotein##AK055885|A1BG|1|alpha-1-B glycoprotein##AB073611|A1BG|1|alpha-1-B glycoprotein##NM_130786|A1BG|1|alpha-1-B glycoprotein##BX537419|A1BG|1|alpha-1-B glycoprotein##AK056201|A1BG|1|alpha-1-B glycoprotein##BC029960|ZNF837|116412|zinc finger protein 837##NM_001129730|ZNF837|116412|zinc finger protein 837##NM_138466|ZNF837|116412|zinc finger protein 837##AK223106|RPS5|6193|ribosomal protein S5##AK311938|RPS5|6193|ribosomal protein S5##D28455|RPS5|6193|ribosomal protein S5##NM_001009|RPS5|6193|ribosomal protein S5##BC015405|RPS5|6193|ribosomal protein S5##BC018828|RPS5|6193|ribosomal protein S5##BC018151|RPS5|6193|ribosomal protein S5##BC035830|RPS5|6193|ribosomal protein S5##U14970|RPS5|6193|ribosomal protein S5##NM_001195135|LOC646862|646862|uncharacterized LOC646862	0.0	
chr20	47003193	47003320	reg1030951.p1	4.250	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-587938	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-588504	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-872572	+	AB037836 TSC_hg19_v1_chr20_-_47444291	441030	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	441183	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	535062	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr3	16875884	16875980	reg1031742.p1	4.250	+	U65918 U66726 U66078 BC027595 NM_001351	-228966	-	BX648638 AK303026 NM_001190811	-229662	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	-320708	-	AB029015 NM_001144382	50519	+	BC036392 NM_015184	98649	+	AK310539 NM_001134381	865579	-	U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5	0.0	
chr3	62544356	62544477	reg1033191.p2	4.250	+	AK290464 NM_018008	-185227	-	BC017772 NM_020685	-239021	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	-239710	+	TSC_hg19_v1_chr3_-_62860565 AB587314	316216	-	AF458662 AB593079 TSC_hg19_v1_chr3_-_62861056 AB032947 NM_003716 NM_183393 NM_183394	316628	-	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	719501	+	AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##AF458662|CADPS|8618|Ca++-dependent secretion activator##AB593079|CADPS|8618|Ca++-dependent secretion activator##AB032947|CADPS|8618|Ca++-dependent secretion activator##NM_003716|CADPS|8618|Ca++-dependent secretion activator##NM_183393|CADPS|8618|Ca++-dependent secretion activator##NM_183394|CADPS|8618|Ca++-dependent secretion activator##NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin	0.969113	CTCF.p2:9:0.969
chr6	155819660	155819748	reg1026773.p2	4.250	+	AF190122 NM_015718	-42668	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-184081	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-184119	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	1279359	+	TSC_hg19_v1_chr6_+_157099206 AB587572	1279521	+	TSC_hg19_v1_chr6_+_157099283 AF521671	1279580	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.475807	CTCF.p2:28:0.476
chr6	72331790	72331878	reg1027114.p1	4.250	+	AK023251 TSC_hg19_v1_chr6_-_72130545	-201334	-	TSC_hg19_v1_chr6_+_71998514 BC110999	-333310	+	TSC_hg19_v1_chr6_+_71998513 BC018688	-333324	+	AB045726 AB051866 TSC_hg19_v1_chr6_+_72596447	264594	+	BC151853 AB002338 BC152435 NM_014989 TSC_hg19_v1_chr6_+_72596658	264819	+	TSC_hg19_v1_chr6_+_72596702 AY190519	264878	+	AK023251|LINC00472|79940|long intergenic non-protein coding RNA 472##BC110999|OGFRL1|79627|opioid growth factor receptor-like 1##BC018688|OGFRL1|79627|opioid growth factor receptor-like 1##AB045726|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB051866|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC151853|RIMS1|22999|regulating synaptic membrane exocytosis 1##AB002338|RIMS1|22999|regulating synaptic membrane exocytosis 1##BC152435|RIMS1|22999|regulating synaptic membrane exocytosis 1##NM_014989|RIMS1|22999|regulating synaptic membrane exocytosis 1##AY190519|RIMS1|22999|regulating synaptic membrane exocytosis 1	0.823914	CTCF.p2:-13:0.824
chr8	41480715	41480895	reg1025687.p2	4.250	+	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	-45111	+	TSC_hg19_v1_chr8_+_41386779 AK095334 AK313373	-94033	+	NM_032336 AK299207 BC027454 TSC_hg19_v1_chr8_+_41386745 BC005995	-94068	+	AB587362 AK057898 NM_152568	24070	-	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	41958	-	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	174335	-	NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AK095334|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK313373|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##NM_032336|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK299207|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC027454|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC005995|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic##M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic	0.0	
chr9	133005570	133005705	reg1034674.p2	4.250	+	NM_001128826	-42766	+	TSC_hg19_v1_chr9_+_132934685 BC004856 NM_014286 AF134479 AF186409 X84048 AB463656	-70824	+	AK024651 TSC_hg19_v1_chr9_+_132897386	-108273	+	NM_000050 NM_054012	314456	+	TSC_hg19_v1_chr9_+_133320348 BC009243 AK304625 AK293114 AK315093 AK027126 BC021676 BC013224	314665	+	TSC_hg19_v1_chr9_-_133454851 AK056037	449212	-	NM_001128826|NCS1|23413|neuronal calcium sensor 1##BC004856|NCS1|23413|neuronal calcium sensor 1##NM_014286|NCS1|23413|neuronal calcium sensor 1##AF134479|NCS1|23413|neuronal calcium sensor 1##AF186409|NCS1|23413|neuronal calcium sensor 1##X84048|NCS1|23413|neuronal calcium sensor 1##AK024651|GPR107|57720|G protein-coupled receptor 107##NM_000050|ASS1|445|argininosuccinate synthase 1##NM_054012|ASS1|445|argininosuccinate synthase 1##BC009243|ASS1|445|argininosuccinate synthase 1##AK304625|ASS1|445|argininosuccinate synthase 1##AK293114|ASS1|445|argininosuccinate synthase 1##AK315093|ASS1|445|argininosuccinate synthase 1##AK027126|ASS1|445|argininosuccinate synthase 1##BC021676|ASS1|445|argininosuccinate synthase 1##BC013224|ASS1|445|argininosuccinate synthase 1##AK056037|LOC100272217|100272217|uncharacterized LOC100272217	0.0	
chr11	65656069	65656178	reg1022513.p2	4.249	+	TSC_hg19_v1_chr11_-_65655968 AF171944 AF171945 AF171946 AF250391 CR456749 EU176427 EU176765 AF010187 BC017448 AK293882 AK315976 AK223438 AK289562 AK296571 AK299159 AK309974 BC014388 NM_004214 NM_198897	-185	-	BC048255 NM_001335 BC035637 AF013611	-8819	+	TSC_hg19_v1_chr11_-_65640272 AY358899 AK075453 AK315181 AB030655 AF109121 AK000980 AK292079 BC010456 BC018871 NM_016938	-15822	-	NM_006848	1751	+	TSC_hg19_v1_chr11_+_65658143 BC008796 AK312109 U63825 AB464503 CU679113	2054	+	CR542257 CR542278 AB463654 DQ891054 DQ892703 DQ893332 DQ894233 DQ896648 EU176469 CU677659 TSC_hg19_v1_chr11_-_65667855 S68214 X16707 AK222902 BC016648	11709	-	AF171944|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF171945|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF171946|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF250391|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##CR456749|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##EU176427|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##EU176765|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF010187|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##BC017448|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK293882|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK315976|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK223438|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK289562|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK296571|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK299159|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK309974|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##BC014388|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##NM_004214|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##NM_198897|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##BC048255|CTSW|1521|cathepsin W##NM_001335|CTSW|1521|cathepsin W##BC035637|CTSW|1521|cathepsin W##AF013611|CTSW|1521|cathepsin W##AY358899|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AK075453|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AK315181|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AB030655|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AF109121|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AK000980|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AK292079|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##BC010456|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##BC018871|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##NM_016938|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##NM_006848|CCDC85B|11007|coiled-coil domain containing 85B##BC008796|CCDC85B|11007|coiled-coil domain containing 85B##AK312109|CCDC85B|11007|coiled-coil domain containing 85B##U63825|CCDC85B|11007|coiled-coil domain containing 85B##CR542257|FOSL1|8061|FOS-like antigen 1##CR542278|FOSL1|8061|FOS-like antigen 1##DQ891054|FOSL1|8061|FOS-like antigen 1##DQ892703|FOSL1|8061|FOS-like antigen 1##DQ893332|FOSL1|8061|FOS-like antigen 1##DQ894233|FOSL1|8061|FOS-like antigen 1##DQ896648|FOSL1|8061|FOS-like antigen 1##EU176469|FOSL1|8061|FOS-like antigen 1##X16707|FOSL1|8061|FOS-like antigen 1##AK222902|FOSL1|8061|FOS-like antigen 1##BC016648|FOSL1|8061|FOS-like antigen 1	0.011907	
chr15	93169033	93169109	reg1026259.p2	4.249	+	AK057393 NM_153040	-154165	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	-231872	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-771504	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	29808	-	BC110328 TSC_hg19_v1_chr15_-_93277463	108318	-	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	274415	+	AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##BC110328|FAM174B|400451|family with sequence similarity 174, member B##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2	0.0	
chr17	56429512	56429693	reg1027781.p1	4.249	+	AB527904 CR407663 EU446710 TSC_hg19_v1_chr17_-_56429531 AK311986 U38817 BC002802 U38818 NM_003168 U43923 AK129758	-66	-	TSC_hg19_v1_chr17_+_56414668 AK000271 BC050403 BC032475	-14913	+	AK311306 TSC_hg19_v1_chr17_+_56414566 BC064565	-15033	+	AB527734 TSC_hg19_v1_chr17_-_56492959 AK296769 AK000322 BC109028	63434	-	TSC_hg19_v1_chr17_-_56494896 CR749257	65291	-	NM_017763 TSC_hg19_v1_chr17_-_56494959 CR627423	65342	-	CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK000271|LOC100506779|100506779|uncharacterized LOC100506779##BC050403|LOC100506779|100506779|uncharacterized LOC100506779##BC032475|LOC100506779|100506779|uncharacterized LOC100506779##AK311306|LOC100506779|100506779|uncharacterized LOC100506779##BC064565|LOC100506779|100506779|uncharacterized LOC100506779##AK296769|RNF43|54894|ring finger protein 43##AK000322|RNF43|54894|ring finger protein 43##BC109028|RNF43|54894|ring finger protein 43##CR749257|RNF43|54894|ring finger protein 43##NM_017763|RNF43|54894|ring finger protein 43##CR627423|RNF43|54894|ring finger protein 43	0.0	
chr18	74909166	74909277	reg1035149.p2	4.249	+	TSC_hg19_v1_chr18_-_74844774 NM_001025100 NM_001025101	-64442	-	TSC_hg19_v1_chr18_-_74844720 BC065248 AB208986 L18865	-64504	-	TSC_hg19_v1_chr18_-_74729052 AK314553 NM_001025081 NM_001025090 NM_001025092 NM_002385 AK293922	-180154	-	TSC_hg19_v1_chr18_+_74961925 NM_001480	52745	+	BC016792 TSC_hg19_v1_chr18_-_75705702	796471	-	BC129827 BC148296 NM_171999	1831053	+	NM_001025100|MBP|4155|myelin basic protein##NM_001025101|MBP|4155|myelin basic protein##BC065248|MBP|4155|myelin basic protein##AB208986|MBP|4155|myelin basic protein##L18865|MBP|4155|myelin basic protein##AK314553|MBP|4155|myelin basic protein##NM_001025081|MBP|4155|myelin basic protein##NM_001025090|MBP|4155|myelin basic protein##NM_001025092|MBP|4155|myelin basic protein##NM_002385|MBP|4155|myelin basic protein##AK293922|MBP|4155|myelin basic protein##NM_001480|GALR1|2587|galanin receptor 1##BC148296|SALL3|27164|sal-like 3 (Drosophila)##NM_171999|SALL3|27164|sal-like 3 (Drosophila)	0.049261	
chr19	947142	947277	reg1029634.p1	4.249	+	TSC_hg19_v1_chr19_+_926038 AY845638 BC060828 NM_005224	-21198	+	TSC_hg19_v1_chr19_+_917306 BC141812 NM_032551 AY253982 BC140825 AB051065 AF343725 AJ309020 AY029541 AY253981 BC111094 EU883577	-29816	+	NM_138774 TSC_hg19_v1_chr19_-_913224	-33985	-	TSC_hg19_v1_chr19_+_984344 NM_024100 BC000040 BC001648 CU674808	37125	+	TSC_hg19_v1_chr19_+_1000312 AY507106 AY507107 NM_138690	53156	+	DQ893224 DQ896554 CU679197 TSC_hg19_v1_chr19_-_1021121 BC008957 DQ005958	73849	-	AY845638|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC060828|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_005224|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC141812|KISS1R|84634|KISS1 receptor##NM_032551|KISS1R|84634|KISS1 receptor##AY253982|KISS1R|84634|KISS1 receptor##BC140825|KISS1R|84634|KISS1 receptor##AB051065|KISS1R|84634|KISS1 receptor##AF343725|KISS1R|84634|KISS1 receptor##AJ309020|KISS1R|84634|KISS1 receptor##AY029541|KISS1R|84634|KISS1 receptor##AY253981|KISS1R|84634|KISS1 receptor##EU883577|KISS1R|84634|KISS1 receptor##NM_138774|R3HDM4|91300|R3H domain containing 4##NM_024100|WDR18|57418|WD repeat domain 18##BC000040|WDR18|57418|WD repeat domain 18##BC001648|WDR18|57418|WD repeat domain 18##AY507106|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##AY507107|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_138690|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##DQ893224|C19orf6|91304|chromosome 19 open reading frame 6##DQ896554|C19orf6|91304|chromosome 19 open reading frame 6##BC008957|C19orf6|91304|chromosome 19 open reading frame 6##DQ005958|C19orf6|91304|chromosome 19 open reading frame 6	0.427563	CTCF.p2:-19:0.428
chr3	120499970	120500117	reg1030721.p2	4.249	+	NM_005513 TSC_hg19_v1_chr3_+_120461590 AK223401 BC005917 S67859	-38461	+	BC020832 TSC_hg19_v1_chr3_-_120461364 AK293085 BX647664 BX647559 BX647593 NM_173825	-38666	-	TSC_hg19_v1_chr3_-_120461353 AB464115	-38692	-	TSC_hg19_v1_chr3_+_120627071 NM_014980 AK296544 BC022029 AB023223	127022	+	AB209867 TSC_hg19_v1_chr3_-_121264836 CR936627 AY338826 NM_199420	764775	-	NM_001012659	786734	+	NM_005513|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa##AK223401|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa##BC005917|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa##S67859|GTF2E1|2960|general transcription factor IIE, polypeptide 1, alpha 56kDa##BC020832|RABL3|285282|RAB, member of RAS oncogene family-like 3##AK293085|RABL3|285282|RAB, member of RAS oncogene family-like 3##BX647664|RABL3|285282|RAB, member of RAS oncogene family-like 3##BX647559|RABL3|285282|RAB, member of RAS oncogene family-like 3##BX647593|RABL3|285282|RAB, member of RAS oncogene family-like 3##NM_173825|RABL3|285282|RAB, member of RAS oncogene family-like 3##NM_014980|STXBP5L|9515|syntaxin binding protein 5-like##AK296544|STXBP5L|9515|syntaxin binding protein 5-like##BC022029|STXBP5L|9515|syntaxin binding protein 5-like##AB023223|STXBP5L|9515|syntaxin binding protein 5-like##AB209867|POLQ|10721|polymerase (DNA directed), theta##CR936627|POLQ|10721|polymerase (DNA directed), theta##AY338826|POLQ|10721|polymerase (DNA directed), theta##NM_199420|POLQ|10721|polymerase (DNA directed), theta##NM_001012659|ARGFX|503582|arginine-fifty homeobox	0.0	
chr5	7794374	7794503	reg1023745.p1	4.249	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	-398170	+	AK308405 NM_001171806 AK303516	-1048316	+	NM_001171805 NM_006999 AF089896 BC084567	-1079688	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	56821	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	74694	-	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	74821	+	NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase	0.0	
chr7	23313072	23313198	reg1004859.p2	4.249	+	AF322909 TSC_hg19_v1_chr7_+_23286426 BC025297 BC011595 CU679974 CU689536 AB528457 DQ892084 DQ895277 BT007074	-26687	+	TSC_hg19_v1_chr7_+_23286407 AJ505015	-26730	+	TSC_hg19_v1_chr7_+_23286393 AK292078 AK296779 AK297031 AK297803 AY359124 BC032783	-26741	+	TSC_hg19_v1_chr7_+_23338957 BC012331 NM_138446 AK127742 AK316559	25830	+	TSC_hg19_v1_chr7_-_23509637 AB529064 CU688032	196544	-	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	196863	-	AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb##BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb##BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb##BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb##AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb##AK292078|GPNMB|10457|glycoprotein (transmembrane) nmb##AK296779|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297031|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297803|GPNMB|10457|glycoprotein (transmembrane) nmb##AY359124|GPNMB|10457|glycoprotein (transmembrane) nmb##BC032783|GPNMB|10457|glycoprotein (transmembrane) nmb##BC012331|C7orf30|115416|chromosome 7 open reading frame 30##NM_138446|C7orf30|115416|chromosome 7 open reading frame 30##AK127742|C7orf30|115416|chromosome 7 open reading frame 30##AK316559|C7orf30|115416|chromosome 7 open reading frame 30##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	0.722241	CTCF.p2:-35:0.722
chr7	49806554	49806712	reg1031276.p1	4.249	+	AK126220 AY204751 BX647273 NM_152701	-1595578	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-1677678	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	-1677833	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	6637	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	326191	-	NM_001161834	329048	+	AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72	0.0	
chr9	36928882	36929043	reg1030668.p1	4.249	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-356038	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-527787	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-528065	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	105454	-	TSC_hg19_v1_chr9_+_37079908 AK091718	150944	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	151046	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.0	
chr11	71460070	71460198	reg1036709.p2	4.248	+	BC130498 BC130502 AB126080 NM_001005405	-166220	-	AB126079 BC137550 BC137566 NM_001012710	-183526	+	NM_005553 X63755 BC101744 AB126078 CU686892 BC069531	-200550	+	TSC_hg19_v1_chr11_+_71498567 NM_001099653 NM_018172 NM_152563 AK130709 AK311675 AK311518 BC032519 AK001523 AK293221 AK311428 AK315454	38473	+	BC073927 TSC_hg19_v1_chr11_-_71524901 BC054093	64772	-	AF529416 NM_001002035	84111	+	BC130498|KRTAP5-11|440051|keratin associated protein 5-11##BC130502|KRTAP5-11|440051|keratin associated protein 5-11##AB126080|KRTAP5-11|440051|keratin associated protein 5-11##NM_001005405|KRTAP5-11|440051|keratin associated protein 5-11##AB126079|KRTAP5-10|387273|keratin associated protein 5-10##BC137550|KRTAP5-10|387273|keratin associated protein 5-10##BC137566|KRTAP5-10|387273|keratin associated protein 5-10##NM_001012710|KRTAP5-10|387273|keratin associated protein 5-10##NM_005553|KRTAP5-9|3846|keratin associated protein 5-9##X63755|KRTAP5-9|3846|keratin associated protein 5-9##BC101744|KRTAP5-9|3846|keratin associated protein 5-9##AB126078|KRTAP5-9|3846|keratin associated protein 5-9##BC069531|KRTAP5-9|3846|keratin associated protein 5-9##NM_001099653|FAM86C1|55199|family with sequence similarity 86, member C1##NM_018172|FAM86C1|55199|family with sequence similarity 86, member C1##NM_152563|FAM86C1|55199|family with sequence similarity 86, member C1##AK130709|FAM86C1|55199|family with sequence similarity 86, member C1##AK311675|FAM86C1|55199|family with sequence similarity 86, member C1##AK311518|FAM86C1|55199|family with sequence similarity 86, member C1##BC032519|FAM86C1|55199|family with sequence similarity 86, member C1##AK001523|FAM86C1|55199|family with sequence similarity 86, member C1##AK293221|FAM86C1|55199|family with sequence similarity 86, member C1##AK311428|FAM86C1|55199|family with sequence similarity 86, member C1##AK315454|FAM86C1|55199|family with sequence similarity 86, member C1##BC073927|LOC285407|285407|asparagine-linked glycosylation 1 homolog pseudogene##AF529416|DEFB108B|245911|defensin, beta 108B##NM_001002035|DEFB108B|245911|defensin, beta 108B	0.662186	CTCF.p2:-5:0.662
chr11	85894276	85894452	reg1030131.p1	4.248	+	AK300275 NM_001206947	-113454	-	TSC_hg19_v1_chr11_-_85780127 AB210017 NM_001008660 NM_001206946 NM_007166 AK291414	-114240	-	TSC_hg19_v1_chr11_-_85780088 BC064357	-114269	-	TSC_hg19_v1_chr11_+_85955830 NM_003797 NM_152991 AK292120 AF080227	61495	+	AF070418 TSC_hg19_v1_chr11_+_85956058	61685	+	AF099032 U90651 TSC_hg19_v1_chr11_+_85956254	61853	+	AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AB210017|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001008660|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206946|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_007166|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AK291414|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC064357|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_003797|EED|8726|embryonic ectoderm development##NM_152991|EED|8726|embryonic ectoderm development##AK292120|EED|8726|embryonic ectoderm development##AF080227|EED|8726|embryonic ectoderm development##AF070418|EED|8726|embryonic ectoderm development##AF099032|EED|8726|embryonic ectoderm development##U90651|EED|8726|embryonic ectoderm development	0.0	
chr12	18145125	18145218	reg1029417.p1	4.248	+	AF258348 BC017777 AB044746 AK095595 AK308826 NM_001001395 NM_001243609	-1384130	-	AK308594 AK294909 NM_001243613	-1385160	-	BC050085 NM_001243610	-1385438	-	AK026308 BC042888 NM_024730	97911	-	NM_004570	269302	+	AF532185 NM_033123 AK314516 AY035866 AK292279	745782	-	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC050085|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243610|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK026308|RERGL|79785|RERG/RAS-like##BC042888|RERGL|79785|RERG/RAS-like##NM_024730|RERGL|79785|RERG/RAS-like##NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1	0.841377	CTCF.p2:3:0.841
chr17	37828309	37828490	reg1022058.p1	4.248	+	BC037246 NM_002686	-3893	+	NM_003673 BC012628 BC013330 AJ000491 DQ892812 DQ896058	-6795	+	NM_001165937 NM_001165938 NM_006804 TSC_hg19_v1_chr17_+_37793404 BC008356 AK301524 AK303114 AK300176 AK225069 BC025679 BC008747 D38255 BC019286 X80198 AK300842	-35012	+	CU679785 AY358437 TSC_hg19_v1_chr17_-_37844279 AB088396 AK314469 BC010652 AK057911 AK075474 AK289612 AK294639 AK301106 NM_033419	15888	-	TSC_hg19_v1_chr17_+_37844346 AK295195 AB025286 BC110392 NM_001005862	15959	+	TSC_hg19_v1_chr17_+_37856197 AB587321	27797	+	BC037246|PNMT|5409|phenylethanolamine N-methyltransferase##NM_002686|PNMT|5409|phenylethanolamine N-methyltransferase##NM_003673|TCAP|8557|titin-cap (telethonin)##BC012628|TCAP|8557|titin-cap (telethonin)##BC013330|TCAP|8557|titin-cap (telethonin)##AJ000491|TCAP|8557|titin-cap (telethonin)##DQ892812|TCAP|8557|titin-cap (telethonin)##DQ896058|TCAP|8557|titin-cap (telethonin)##NM_001165937|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##NM_001165938|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##NM_006804|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC008356|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK301524|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK303114|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK300176|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK225069|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC025679|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC008747|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##D38255|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##BC019286|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##X80198|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AK300842|STARD3|10948|StAR-related lipid transfer (START) domain containing 3##AY358437|PGAP3|93210|post-GPI attachment to proteins 3##AB088396|PGAP3|93210|post-GPI attachment to proteins 3##AK314469|PGAP3|93210|post-GPI attachment to proteins 3##BC010652|PGAP3|93210|post-GPI attachment to proteins 3##AK057911|PGAP3|93210|post-GPI attachment to proteins 3##AK075474|PGAP3|93210|post-GPI attachment to proteins 3##AK289612|PGAP3|93210|post-GPI attachment to proteins 3##AK294639|PGAP3|93210|post-GPI attachment to proteins 3##AK301106|PGAP3|93210|post-GPI attachment to proteins 3##NM_033419|PGAP3|93210|post-GPI attachment to proteins 3##AK295195|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##AB025286|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##BC110392|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)##NM_001005862|ERBB2|2064|v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	0.0	
chr2	127839495	127839604	reg1031188.p2	4.248	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-425757	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-425842	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-3056685	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	25192	-	BC039307 NM_001001665	123793	-	AK131190 TSC_hg19_v1_chr2_-_127977781	138168	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.0	
chr2	18792	18903	reg1031872.p1	4.248	+	None	None	None	None	None	None	None	None	None	DQ431183 TSC_hg19_v1_chr2_-_46477 AK302544 NM_001077710	27638	-	AK055801 BC008374 BC013286 BC008375 AK026507 TSC_hg19_v1_chr2_-_264033	245160	-	TSC_hg19_v1_chr2_-_264039 NM_001159597 NM_015677	245205	-	DQ431183|FAM110C|642273|family with sequence similarity 110, member C##AK302544|FAM110C|642273|family with sequence similarity 110, member C##NM_001077710|FAM110C|642273|family with sequence similarity 110, member C##AK055801|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC008374|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC013286|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC008375|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##AK026507|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##NM_001159597|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##NM_015677|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)	0.980068	CTCF.p2:-7:0.980
chr2	240746070	240746171	reg1028016.p1	4.248	+	TSC_hg19_v1_chr2_-_240323341 AK308791	-422772	-	TSC_hg19_v1_chr2_-_240322695 BC039904	-423422	-	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	-423472	-	AF453834 TSC_hg19_v1_chr2_-_240964750 CU678462 DQ891011 DQ894191 BC031332 AF087661 AB209440 AK290778 BC003417 AF087854	218641	-	TSC_hg19_v1_chr2_-_240964807 NM_004544	218692	-	NM_001005853 BC137561 BC137562	223755	-	AK308791|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##AF453834|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ891011|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ894191|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC031332|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087661|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AB209440|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AK290778|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC003417|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087854|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_004544|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_001005853|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137561|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137562|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2	0.0	
chr2	38968149	38968294	reg1029551.p2	4.248	+	BC019263 TSC_hg19_v1_chr2_+_38893258 AK291489 U11036 BC014916	-74966	+	NM_138801 TSC_hg19_v1_chr2_+_38893054	-75169	+	AK000155 TSC_hg19_v1_chr2_-_38830104 AK292259 NM_001142650 NM_138394	-138080	-	AB445102 BT006745 AB527733 AK091425 AX746975 AY513287 AF055270 BC000997 BC017369 BC017908 BC022328 TSC_hg19_v1_chr2_-_38978504 AK225141 AK293667 AK297161 L22253 AY166860 NM_001031684 NM_001195446	10295	-	NM_024775 AK315627 TSC_hg19_v1_chr2_+_39005351 AK027112 BC018195	37134	+	BC131534 BC060778 NM_198963 AK307514 AK296739 BC153875	134807	-	BC019263|GALM|130589|galactose mutarotase (aldose 1-epimerase)##AK291489|GALM|130589|galactose mutarotase (aldose 1-epimerase)##U11036|GALM|130589|galactose mutarotase (aldose 1-epimerase)##BC014916|GALM|130589|galactose mutarotase (aldose 1-epimerase)##NM_138801|GALM|130589|galactose mutarotase (aldose 1-epimerase)##AK000155|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AK292259|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##NM_001142650|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##NM_138394|HNRPLL|92906|heterogeneous nuclear ribonucleoprotein L-like##AB445102|SRSF7|6432|serine/arginine-rich splicing factor 7##BT006745|SRSF7|6432|serine/arginine-rich splicing factor 7##AK091425|SRSF7|6432|serine/arginine-rich splicing factor 7##AY513287|SRSF7|6432|serine/arginine-rich splicing factor 7##AF055270|SRSF7|6432|serine/arginine-rich splicing factor 7##BC000997|SRSF7|6432|serine/arginine-rich splicing factor 7##BC017369|SRSF7|6432|serine/arginine-rich splicing factor 7##BC017908|SRSF7|6432|serine/arginine-rich splicing factor 7##BC022328|SRSF7|6432|serine/arginine-rich splicing factor 7##AK225141|SRSF7|6432|serine/arginine-rich splicing factor 7##AK293667|SRSF7|6432|serine/arginine-rich splicing factor 7##AK297161|SRSF7|6432|serine/arginine-rich splicing factor 7##L22253|SRSF7|6432|serine/arginine-rich splicing factor 7##AY166860|SRSF7|6432|serine/arginine-rich splicing factor 7##NM_001031684|SRSF7|6432|serine/arginine-rich splicing factor 7##NM_001195446|SRSF7|6432|serine/arginine-rich splicing factor 7##NM_024775|GEMIN6|79833|gem (nuclear organelle) associated protein 6##AK315627|GEMIN6|79833|gem (nuclear organelle) associated protein 6##AK027112|GEMIN6|79833|gem (nuclear organelle) associated protein 6##BC018195|GEMIN6|79833|gem (nuclear organelle) associated protein 6##BC131534|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##BC060778|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##NM_198963|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##AK307514|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##AK296739|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57##BC153875|DHX57|90957|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	0.848166	CTCF.p2:-19:0.848
chr7	74541357	74541537	reg1031729.p2	4.248	+	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	-33073	+	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	-51755	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	-51809	-	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	326073	-	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	447123	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	483518	+	NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73	0.0	
chr10	90232448	90232551	reg1031322.p1	4.247	+	TSC_hg19_v1_chr10_+_89623420 U96180	-609072	+	TSC_hg19_v1_chr10_+_89623380 BC005821	-609110	+	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	-609273	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	110515	-	BC042900 BC031219 NM_001010939	114014	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	191681	+	U96180|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric	0.0	
chr1	183573451	183573613	reg1034463.p1	4.247	+	M32011 TSC_hg19_v1_chr1_-_183560049 NM_001127651	-13500	-	TSC_hg19_v1_chr1_-_183559669 BC001606 NM_000433 NM_001190789 NM_001190794	-13819	-	BT007439 AB590135 DQ893650 DQ895812 CU674784 AF527950 TSC_hg19_v1_chr1_-_183559595 AK296672 AK312666 AK298713	-13974	-	AB528796 TSC_hg19_v1_chr1_-_183604811 AF017807 CU691198 AF006088	31276	-	TSC_hg19_v1_chr1_-_183604862 AK129598	31325	-	TSC_hg19_v1_chr1_-_183604891 BC057237 NM_005717 BC071857	31408	-	M32011|NCF2|4688|neutrophil cytosolic factor 2##NM_001127651|NCF2|4688|neutrophil cytosolic factor 2##BC001606|NCF2|4688|neutrophil cytosolic factor 2##NM_000433|NCF2|4688|neutrophil cytosolic factor 2##NM_001190789|NCF2|4688|neutrophil cytosolic factor 2##NM_001190794|NCF2|4688|neutrophil cytosolic factor 2##BT007439|NCF2|4688|neutrophil cytosolic factor 2##DQ893650|NCF2|4688|neutrophil cytosolic factor 2##DQ895812|NCF2|4688|neutrophil cytosolic factor 2##AF527950|NCF2|4688|neutrophil cytosolic factor 2##AK296672|NCF2|4688|neutrophil cytosolic factor 2##AK312666|NCF2|4688|neutrophil cytosolic factor 2##AK298713|NCF2|4688|neutrophil cytosolic factor 2##AF017807|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##AF006088|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##AK129598|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##BC057237|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##NM_005717|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##BC071857|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa	0.0	
chr15	96372503	96372610	reg1032006.p1	4.247	+	TSC_hg19_v1_chr15_-_95870310 BC040875	-502237	-	NM_001159644 BC025708 BC111024 AK002037	-1473247	+	NM_001159643 NM_018349 AY656717 BC131527	-1531095	+	BC106083 NM_001145155 FM208183	496605	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	501421	+	AK316086 NM_001145156	503237	+	BC040875|LOC400456|400456|uncharacterized LOC400456##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.025829	
chr16	17121722	17121830	reg1026075.p4	4.247	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-795246	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-795288	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-795294	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	443029	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1451615	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1676320	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr3	16309674	16309783	reg1028844.p1	4.247	+	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-3020	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	-3339	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-93534	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	245290	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	245496	-	BX648638 AK303026 NM_001190811	336542	-	NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like	0.999319	CTCF.p2:29:0.999
chr11	134945686	134945798	reg1032820.p2	4.246	+	AB029396 BC010466 NM_018644 NM_054025 TSC_hg19_v1_chr11_-_134281917	-663921	-	AK074855 AK074855 TSC_hg19_v1_chr11_+_134201905 AK074947 AK074947	-743822	+	NM_138342 BC040641 BC040641 AK074703 AK074703 TSC_hg19_v1_chr11_+_134201886 AY358497 AY358497	-743914	+	None	None	None	None	None	None	None	None	None	AB029396|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##BC010466|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##NM_018644|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##NM_054025|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##AK074855|GLB1L2|89944|galactosidase, beta 1-like 2##AK074855|GLB1L2|89944|galactosidase, beta 1-like 2##AK074947|GLB1L2|89944|galactosidase, beta 1-like 2##AK074947|GLB1L2|89944|galactosidase, beta 1-like 2##NM_138342|GLB1L2|89944|galactosidase, beta 1-like 2##BC040641|GLB1L2|89944|galactosidase, beta 1-like 2##BC040641|GLB1L2|89944|galactosidase, beta 1-like 2##AK074703|GLB1L2|89944|galactosidase, beta 1-like 2##AK074703|GLB1L2|89944|galactosidase, beta 1-like 2##AY358497|GLB1L2|89944|galactosidase, beta 1-like 2##AY358497|GLB1L2|89944|galactosidase, beta 1-like 2	2.393573	CTCF.p2:-19:0.949	CTCF.p2:40:0.556	CTCF.p2:101:0.889
chr2	242754829	242754970	reg1018566.p1	4.246	+	AK091038 AX746745 NM_001167599 NM_001167602 NM_080741 BC012899	-2849	+	TSC_hg19_v1_chr2_+_242750289 AK289421 AK300969 AK025617 AK096992 AK298403 AY203952	-4605	+	NM_001167600 NM_001167601 TSC_hg19_v1_chr2_+_242750226	-4703	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	46125	-	AK090909 AX746675 BC113517 BC113519 NM_173821	56983	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	275960	+	AK091038|NEU4|129807|sialidase 4##NM_001167599|NEU4|129807|sialidase 4##NM_001167602|NEU4|129807|sialidase 4##NM_080741|NEU4|129807|sialidase 4##BC012899|NEU4|129807|sialidase 4##AK289421|NEU4|129807|sialidase 4##AK300969|NEU4|129807|sialidase 4##AK025617|NEU4|129807|sialidase 4##AK096992|NEU4|129807|sialidase 4##AK298403|NEU4|129807|sialidase 4##AY203952|NEU4|129807|sialidase 4##NM_001167600|NEU4|129807|sialidase 4##NM_001167601|NEU4|129807|sialidase 4##AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1##AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AK298283|LOC728323|728323|uncharacterized LOC728323	0.0	
chr5	154011572	154011644	reg1033561.p1	4.246	+	TSC_hg19_v1_chr5_-_153857823 AF061756 NM_004821	-153786	-	TSC_hg19_v1_chr5_-_153857790 BC021190	-153820	-	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	-185998	+	BC001460 NM_015315 CU674716	80865	+	TSC_hg19_v1_chr5_+_154134891 AB018274	123287	+	TSC_hg19_v1_chr5_+_154135038 AK091465 AX747001	123473	+	AF061756|HAND1|9421|heart and neural crest derivatives expressed 1##NM_004821|HAND1|9421|heart and neural crest derivatives expressed 1##BC021190|HAND1|9421|heart and neural crest derivatives expressed 1##AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like##BC001460|LARP1|23367|La ribonucleoprotein domain family, member 1##NM_015315|LARP1|23367|La ribonucleoprotein domain family, member 1##AB018274|LARP1|23367|La ribonucleoprotein domain family, member 1##AK091465|LARP1|23367|La ribonucleoprotein domain family, member 1	0.297444	CTCF.p2:-12:0.297
chr6	13767830	13767963	reg1029975.p2	4.246	+	BC052781 TSC_hg19_v1_chr6_-_13711955	-55922	-	TSC_hg19_v1_chr6_-_13711730 AB055311 NM_005493	-56161	-	AB008515 TSC_hg19_v1_chr6_-_13711498	-56405	-	BC008234 TSC_hg19_v1_chr6_-_13814790 BC016850 NM_001031713 AK024611	46872	-	NM_001165034	156780	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	157270	+	BC052781|RANBP9|10048|RAN binding protein 9##AB055311|RANBP9|10048|RAN binding protein 9##NM_005493|RANBP9|10048|RAN binding protein 9##AB008515|RANBP9|10048|RAN binding protein 9##BC008234|CCDC90A|63933|coiled-coil domain containing 90A##BC016850|CCDC90A|63933|coiled-coil domain containing 90A##NM_001031713|CCDC90A|63933|coiled-coil domain containing 90A##AK024611|CCDC90A|63933|coiled-coil domain containing 90A##NM_001165034|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182	0.54326	CTCF.p2:9:0.543
chr6_ssto_hap7	4696421	4696510	reg1030048.p1	4.246	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.960769	CTCF.p2:8:0.961
chr9	95824813	95824885	reg1029484.p3	4.246	+	TSC_hg19_v1_chr9_+_95821007 CU677063 DQ894024 EU176188 AY358190	-3825	+	TSC_hg19_v1_chr9_+_95820982 BC014601 NM_145006	-3873	+	NM_033086 BX647829 BC111054 AY211386	-88100	+	NM_032310 TSC_hg19_v1_chr9_+_95858498 AK057716 AK091611 AX747094 BC042201 BC038856 BC004500	33631	+	BC091476 TSC_hg19_v1_chr9_+_95858566	33730	+	BT007164 CU690562 U72661 U91512 BC019336 BC004440 BC000298 TSC_hg19_v1_chr9_-_95896534 BC048212 NM_004148	71693	-	DQ894024|SUSD3|203328|sushi domain containing 3##EU176188|SUSD3|203328|sushi domain containing 3##AY358190|SUSD3|203328|sushi domain containing 3##BC014601|SUSD3|203328|sushi domain containing 3##NM_145006|SUSD3|203328|sushi domain containing 3##NM_033086|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BX647829|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BC111054|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AY211386|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##NM_032310|C9orf89|84270|chromosome 9 open reading frame 89##AK057716|C9orf89|84270|chromosome 9 open reading frame 89##AK091611|C9orf89|84270|chromosome 9 open reading frame 89##BC042201|C9orf89|84270|chromosome 9 open reading frame 89##BC038856|C9orf89|84270|chromosome 9 open reading frame 89##BC004500|C9orf89|84270|chromosome 9 open reading frame 89##BC091476|C9orf89|84270|chromosome 9 open reading frame 89##BT007164|NINJ1|4814|ninjurin 1##U72661|NINJ1|4814|ninjurin 1##U91512|NINJ1|4814|ninjurin 1##BC019336|NINJ1|4814|ninjurin 1##BC004440|NINJ1|4814|ninjurin 1##BC000298|NINJ1|4814|ninjurin 1##BC048212|NINJ1|4814|ninjurin 1##NM_004148|NINJ1|4814|ninjurin 1	0.540506	CTCF.p2:29:0.541
chr10	125119277	125119438	reg1025962.p2	4.245	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-205001	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-205411	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-205459	+	AJ505757 NM_153442 BC112011 BC113462	306520	+	BC137492 BC146862 AY358565 NM_198148	532139	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	732542	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.0	
chr1	145588668	145588792	reg1016166.p1	4.245	+	TSC_hg19_v1_chr1_+_145576019 AK294231 BC030556 BC001154 AB528548 AB021868	-12685	+	NM_006099 TSC_hg19_v1_chr1_+_145575987 AK027557	-12738	+	TSC_hg19_v1_chr1_+_145575289 AK304039	-13484	+	TSC_hg19_v1_chr1_-_145589439 NM_001012758 AK298083	678	-	TSC_hg19_v1_chr1_-_145610895 U93867 BC002586 NM_006468	22156	-	TSC_hg19_v1_chr1_-_145610937 BC004424	22205	-	AK294231|PIAS3|10401|protein inhibitor of activated STAT, 3##BC030556|PIAS3|10401|protein inhibitor of activated STAT, 3##BC001154|PIAS3|10401|protein inhibitor of activated STAT, 3##AB021868|PIAS3|10401|protein inhibitor of activated STAT, 3##NM_006099|PIAS3|10401|protein inhibitor of activated STAT, 3##AK027557|PIAS3|10401|protein inhibitor of activated STAT, 3##AK304039|PIAS3|10401|protein inhibitor of activated STAT, 3##NM_001012758|NUDT17|200035|nudix (nucleoside diphosphate linked moiety X)-type motif 17##AK298083|NUDT17|200035|nudix (nucleoside diphosphate linked moiety X)-type motif 17##U93867|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)##BC002586|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)##NM_006468|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)##BC004424|POLR3C|10623|polymerase (RNA) III (DNA directed) polypeptide C (62kD)	0.072894	
chr1	231493888	231494069	reg1003659.p2	4.245	+	TSC_hg19_v1_chr1_+_231473794 BC015740	-20191	+	NM_001010984 NM_032018 BC068478 TSC_hg19_v1_chr1_+_231473753	-20260	+	CU690194 AB587600 BC035763 TSC_hg19_v1_chr1_-_231473577 NM_175876 AK096460	-20424	-	AF229245 NM_022051	66811	-	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	170453	+	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	268577	+	BC015740|C1orf124|83932|chromosome 1 open reading frame 124##NM_001010984|C1orf124|83932|chromosome 1 open reading frame 124##NM_032018|C1orf124|83932|chromosome 1 open reading frame 124##BC068478|C1orf124|83932|chromosome 1 open reading frame 124##BC035763|EXOC8|149371|exocyst complex component 8##NM_175876|EXOC8|149371|exocyst complex component 8##AK096460|EXOC8|149371|exocyst complex component 8##AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)##NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)##FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1	0.0	
chr1	27930598	27930779	reg1030114.p2	4.245	+	BC064935 TSC_hg19_v1_chr1_-_27930394	-311	-	BC042058 NM_001029882	-567	-	TSC_hg19_v1_chr1_-_27816676 NM_001201404 NM_006990	-114012	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	21982	-	M27454 AK301078 BC002836 AK304846 NM_001042729	22387	-	TSC_hg19_v1_chr1_-_27961656 BC064382 AK130188 NM_005248	30998	-	BC064935|AHDC1|27245|AT hook, DNA binding motif, containing 1##NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1##NM_001201404|WASF2|10163|WAS protein family, member 2##NM_006990|WASF2|10163|WAS protein family, member 2##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##M27454|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK301078|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042729|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##BC064382|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK130188|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_005248|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	0.0	
chr2	135480465	135480605	reg1032383.p2	4.245	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	-3979	-	NM_002410 D17716 AF113921	-468650	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-1154497	-	AK125008 NM_138326 BC016018 BC107420 AB071418	115683	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	195862	+	TSC_hg19_v1_chr2_+_135676409 AF048732	195884	+	BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2##AF048732|CCNT2|905|cyclin T2	0.280478	CTCF.p2:-22:0.267
chr21	45626765	45626851	reg1036287.p1	4.245	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-73247	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-73303	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-99509	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	33958	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	34049	-	AF194032 NM_013369 NM_175867	55290	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr22	21942820	21942887	reg1028208.p2	4.245	+	TSC_hg19_v1_chr22_+_21922030 AB528270 CU013202 CU013490 X92962	-20810	+	TSC_hg19_v1_chr22_+_21922021 AK311761 AK291083 AK293179	-20831	+	TSC_hg19_v1_chr22_+_21922018 AJ000519 AK125396 S81003	-20837	+	TSC_hg19_v1_chr22_-_21984304 BC064568 BC053663 BC017281 BC110075 BC110799 BC057814 NM_001017964 BC096754	41462	-	TSC_hg19_v1_chr22_-_21984367 BC133043 BC133047	41547	-	TSC_hg19_v1_chr22_+_21987057 AK302030 AK093365 AX748079 BC033499 NM_152612	44173	+	CU013202|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##CU013490|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##X92962|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK311761|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK291083|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK293179|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AJ000519|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK125396|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##S81003|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##BC064568|YDJC|150223|YdjC homolog (bacterial)##BC053663|YDJC|150223|YdjC homolog (bacterial)##BC017281|YDJC|150223|YdjC homolog (bacterial)##BC110075|YDJC|150223|YdjC homolog (bacterial)##BC110799|YDJC|150223|YdjC homolog (bacterial)##BC057814|YDJC|150223|YdjC homolog (bacterial)##NM_001017964|YDJC|150223|YdjC homolog (bacterial)##BC096754|YDJC|150223|YdjC homolog (bacterial)##BC133043|YDJC|150223|YdjC homolog (bacterial)##BC133047|YDJC|150223|YdjC homolog (bacterial)##AK302030|CCDC116|164592|coiled-coil domain containing 116##AK093365|CCDC116|164592|coiled-coil domain containing 116##BC033499|CCDC116|164592|coiled-coil domain containing 116##NM_152612|CCDC116|164592|coiled-coil domain containing 116	0.0	
chr6	10694949	10695047	reg1035087.p1	4.245	+	BC016820 NM_001145020	-161	-	AK313426 BX647668 NM_145655 BX647576 AL832719 BC130524	-108984	+	NM_001491	-139050	+	TSC_hg19_v1_chr6_+_10695204 BC010907 NM_017906 AB527917 DQ892798 DQ896045	188	+	NM_001165258 NM_016462 TSC_hg19_v1_chr6_+_10723398 AF151028 BC010086 AK310191 AK309591 AF164962 BC002496 AK223462	28300	+	AK311340 TSC_hg19_v1_chr6_+_10748043 NM_001127711 NM_030969 AK294018 BC013913 AK291883 AK294152 BC007080 BC001033 BC071660	53042	+	BC016820|C6orf52|347744|chromosome 6 open reading frame 52##NM_001145020|C6orf52|347744|chromosome 6 open reading frame 52##AK313426|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647668|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145655|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647576|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832719|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BC130524|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BC010907|PAK1IP1|55003|PAK1 interacting protein 1##NM_017906|PAK1IP1|55003|PAK1 interacting protein 1##DQ892798|PAK1IP1|55003|PAK1 interacting protein 1##DQ896045|PAK1IP1|55003|PAK1 interacting protein 1##NM_001165258|TMEM14C|51522|transmembrane protein 14C##NM_016462|TMEM14C|51522|transmembrane protein 14C##AF151028|TMEM14C|51522|transmembrane protein 14C##BC010086|TMEM14C|51522|transmembrane protein 14C##AK310191|TMEM14C|51522|transmembrane protein 14C##AK309591|TMEM14C|51522|transmembrane protein 14C##AF164962|TMEM14C|51522|transmembrane protein 14C##BC002496|TMEM14C|51522|transmembrane protein 14C##AK223462|TMEM14C|51522|transmembrane protein 14C##AK311340|TMEM14B|81853|transmembrane protein 14B##NM_001127711|TMEM14B|81853|transmembrane protein 14B##NM_030969|TMEM14B|81853|transmembrane protein 14B##BC013913|TMEM14B|81853|transmembrane protein 14B##AK291883|TMEM14B|81853|transmembrane protein 14B##AK294152|TMEM14B|81853|transmembrane protein 14B##BC007080|TMEM14B|81853|transmembrane protein 14B##BC001033|TMEM14B|81853|transmembrane protein 14B##BC071660|TMEM14B|81853|transmembrane protein 14B	0.0	
chr9	38620931	38621093	reg1019166.p2	4.245	+	TSC_hg19_v1_chr9_-_38620602 BC056266	-389	-	AB385522 AB095935 BC152434 NM_147195	-691	-	TSC_hg19_v1_chr9_-_38424452 AB463783 NM_001007563	-196547	-	AB385498 AK294281 AB051501 BC132737 BC144130 AK056833 NM_033655	667168	-	AK302569 NM_001040065 NM_001085452 BC146855	734673	+	AK302569 NM_001040065 NM_001085452 BC146855	1263949	+	BC056266|ANKRD18A|253650|ankyrin repeat domain 18A##AB095935|ANKRD18A|253650|ankyrin repeat domain 18A##BC152434|ANKRD18A|253650|ankyrin repeat domain 18A##NM_147195|ANKRD18A|253650|ankyrin repeat domain 18A##NM_001007563|IGFBPL1|347252|insulin-like growth factor binding protein-like 1##AK294281|CNTNAP3|79937|contactin associated protein-like 3##AB051501|CNTNAP3|79937|contactin associated protein-like 3##BC132737|CNTNAP3|79937|contactin associated protein-like 3##BC144130|CNTNAP3|79937|contactin associated protein-like 3##AK056833|CNTNAP3|79937|contactin associated protein-like 3##NM_033655|CNTNAP3|79937|contactin associated protein-like 3##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2	0.030492	
chr1	226632778	226632883	reg1027409.p1	4.244	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-37027	-	AK303340 M32721 TSC_hg19_v1_chr1_-_226595791	-37040	-	BC037545 TSC_hg19_v1_chr1_-_226595774 BC008660 BC014206	-37053	-	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	103671	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	103787	+	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	294108	-	NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##AK303340|PARP1|142|poly (ADP-ribose) polymerase 1##M32721|PARP1|142|poly (ADP-ribose) polymerase 1##BC037545|PARP1|142|poly (ADP-ribose) polymerase 1##BC008660|PARP1|142|poly (ADP-ribose) polymerase 1##BC014206|PARP1|142|poly (ADP-ribose) polymerase 1##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B	0.042745	
chr14	71174137	71174288	reg1029193.p2	4.244	+	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	-65603	+	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	-106835	-	AB463868 BT006831 CR541697 TSC_hg19_v1_chr14_-_71067367	-106852	-	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	101597	-	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	199921	+	TSC_hg19_v1_chr14_+_71374441 BC140784	200239	+	D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9##AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##BT006831|MED6|10001|mediator complex subunit 6##CR541697|MED6|10001|mediator complex subunit 6##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##BC140784|PCNX|22990|pecanex homolog (Drosophila)	0.0	
chr18	11728397	11728501	reg1034841.p1	4.244	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	-39237	+	NM_022068	-579689	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-1202352	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	23066	+	L10665 TSC_hg19_v1_chr18_+_11752245	23766	+	NM_020412 TSC_hg19_v1_chr18_+_11851412 AK314068 BC065933 BC012733 AF281064 CU680382	123000	+	NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_020412|CHMP1B|57132|charged multivesicular body protein 1B##AK314068|CHMP1B|57132|charged multivesicular body protein 1B##BC065933|CHMP1B|57132|charged multivesicular body protein 1B##BC012733|CHMP1B|57132|charged multivesicular body protein 1B##AF281064|CHMP1B|57132|charged multivesicular body protein 1B	0.995715	CTCF.p2:-5:0.996
chr2	197278607	197278726	reg1031649.p1	4.244	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-242348	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-242387	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-345171	-	BC117194 BC117198 AB037722 NM_020760	178626	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	225691	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	385747	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.0	
chr3	135637630	135637729	reg1031228.p1	4.244	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-1123378	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-1123528	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-1267834	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	46852	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	46941	+	NM_181897 AK316258 L12146	103939	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.971339	CTCF.p2:-20:0.971
chr4	156893369	156893485	reg1030786.p2	4.244	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	-18379	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	-68550	+	AB528059 AJ252011 NM_017419	-106027	-	AB590688 BC051876 BC094746 AF260738 AK300480 AF244813 AK313817 BC041783 BC065490 TSC_hg19_v1_chr4_-_157892334 AM922296 AB033831	998790	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	999051	-	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	999132	-	BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##BC051876|PDGFC|56034|platelet derived growth factor C##BC094746|PDGFC|56034|platelet derived growth factor C##AF260738|PDGFC|56034|platelet derived growth factor C##AK300480|PDGFC|56034|platelet derived growth factor C##AF244813|PDGFC|56034|platelet derived growth factor C##AK313817|PDGFC|56034|platelet derived growth factor C##BC041783|PDGFC|56034|platelet derived growth factor C##AM922296|PDGFC|56034|platelet derived growth factor C##AB033831|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C	0.842251	CTCF.p2:7:0.842
chr4	39640434	39640527	reg1035135.p1	4.244	+	TSC_hg19_v1_chr4_+_39529635 AK056558	-110854	+	TSC_hg19_v1_chr4_-_39529187 NM_001184700 NM_001184701 NM_003359	-111305	-	TSC_hg19_v1_chr4_-_39529060 AF061016 AJ007702 BC022781 AK097930 AK297737	-111473	-	TSC_hg19_v1_chr4_-_39640486 AK023351 BC008502 NM_174921 AK307146	76	-	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	59324	+	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	338858	-	NM_001184700|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001184701|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_003359|UGDH|7358|UDP-glucose 6-dehydrogenase##AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase##AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase##BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase##AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase##AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase##AK023351|C4orf34|201895|chromosome 4 open reading frame 34##BC008502|C4orf34|201895|chromosome 4 open reading frame 34##NM_174921|C4orf34|201895|chromosome 4 open reading frame 34##AK307146|C4orf34|201895|chromosome 4 open reading frame 34##NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	0.0	
chrX	149849605	149849699	reg1029713.p1	4.244	+	AL832715 AK297021 BC030779 TSC_hg19_v1_chrX_+_149737092	-112548	+	TSC_hg19_v1_chrX_+_149737070 NM_000252 AK291710 U46024 AK297057 AK304036	-112606	+	NM_001177466 NM_005491 U46023 BC136324 AB527434 AK315217	-235870	+	TSC_hg19_v1_chrX_+_149861868 BC032947 NM_003828 AK226109 AF057354 AJ224979	12269	+	AM393605 AM393786 DQ891322 DQ894506 AK290200 TSC_hg19_v1_chrX_-_150067096 AK293244 AY078165 AY078166 AY078167 AK125020 AK291375 BC025729 AK295217	217441	-	TSC_hg19_v1_chrX_-_150067149 BC030536 AY358837 AL136580 NM_001184808 NM_001242614 NM_031462 NM_134445 NM_134446	217555	-	AL832715|MTM1|4534|myotubularin 1##AK297021|MTM1|4534|myotubularin 1##BC030779|MTM1|4534|myotubularin 1##NM_000252|MTM1|4534|myotubularin 1##AK291710|MTM1|4534|myotubularin 1##U46024|MTM1|4534|myotubularin 1##AK297057|MTM1|4534|myotubularin 1##AK304036|MTM1|4534|myotubularin 1##NM_001177466|MAMLD1|10046|mastermind-like domain containing 1##NM_005491|MAMLD1|10046|mastermind-like domain containing 1##U46023|MAMLD1|10046|mastermind-like domain containing 1##BC136324|MAMLD1|10046|mastermind-like domain containing 1##AK315217|MAMLD1|10046|mastermind-like domain containing 1##BC032947|MTMR1|8776|myotubularin related protein 1##NM_003828|MTMR1|8776|myotubularin related protein 1##AK226109|MTMR1|8776|myotubularin related protein 1##AF057354|MTMR1|8776|myotubularin related protein 1##AJ224979|MTMR1|8776|myotubularin related protein 1##AM393605|CD99L2|83692|CD99 molecule-like 2##AM393786|CD99L2|83692|CD99 molecule-like 2##DQ891322|CD99L2|83692|CD99 molecule-like 2##DQ894506|CD99L2|83692|CD99 molecule-like 2##AK290200|CD99L2|83692|CD99 molecule-like 2##AK293244|CD99L2|83692|CD99 molecule-like 2##AY078165|CD99L2|83692|CD99 molecule-like 2##AY078166|CD99L2|83692|CD99 molecule-like 2##AY078167|CD99L2|83692|CD99 molecule-like 2##AK125020|CD99L2|83692|CD99 molecule-like 2##AK291375|CD99L2|83692|CD99 molecule-like 2##BC025729|CD99L2|83692|CD99 molecule-like 2##AK295217|CD99L2|83692|CD99 molecule-like 2##BC030536|CD99L2|83692|CD99 molecule-like 2##AY358837|CD99L2|83692|CD99 molecule-like 2##AL136580|CD99L2|83692|CD99 molecule-like 2##NM_001184808|CD99L2|83692|CD99 molecule-like 2##NM_001242614|CD99L2|83692|CD99 molecule-like 2##NM_031462|CD99L2|83692|CD99 molecule-like 2##NM_134445|CD99L2|83692|CD99 molecule-like 2##NM_134446|CD99L2|83692|CD99 molecule-like 2	0.294153	CTCF.p2:5:0.294
chr10	26727267	26727362	reg1022863.p3	4.243	+	TSC_hg19_v1_chr10_+_26727269 NM_019043	-43	+	M74826 BC029517 M81882 TSC_hg19_v1_chr10_+_26505702 BC126327 BC126329 AB527954 HQ258311	-221649	+	NM_000818 NM_001134366	-222079	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	3	+	TSC_hg19_v1_chr10_+_26727679 BC054516	354	+	TSC_hg19_v1_chr10_+_26727703 AY152730	392	+	NM_019043|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##HQ258311|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AY152730|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	0.0	
chr16	27410434	27410576	reg1031573.p2	4.243	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-69161	+	TSC_hg19_v1_chr16_+_27325301 BC110343 AK223591 X52425	-85187	+	TSC_hg19_v1_chr16_+_27325254 AK314863 NM_000418 NM_001008699 AK303255	-85251	+	AK292663 NM_181078 NM_181079 AK312825	2982	+	NM_021798 AY358826 AF254067	28099	+	TSC_hg19_v1_chr16_-_27561218 BX648143	150713	-	BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BC110343|IL4R|3566|interleukin 4 receptor##AK223591|IL4R|3566|interleukin 4 receptor##X52425|IL4R|3566|interleukin 4 receptor##AK314863|IL4R|3566|interleukin 4 receptor##NM_000418|IL4R|3566|interleukin 4 receptor##NM_001008699|IL4R|3566|interleukin 4 receptor##AK303255|IL4R|3566|interleukin 4 receptor##AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.0	
chr19	2222065	2222164	reg1027995.p1	4.243	+	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	-57976	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-70561	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	-70572	-	BC021037 TSC_hg19_v1_chr19_+_2222534	360	+	BC032803 TSC_hg19_v1_chr19_+_2232168	10007	+	CR457253 CU679203 TSC_hg19_v1_chr19_-_2236329 AK092742 AX747701 BC003084 BC008966 AK001159 NM_018049	14175	-	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##CR457253|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK092742|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC003084|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC008966|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK001159|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##NM_018049|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1	0.27563	CTCF.p2:19:0.276
chr20	49186780	49186961	reg1008942.p1	4.243	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	-59865	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-59938	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-59951	+	AK056792 NM_080829	66555	-	TSC_hg19_v1_chr20_-_49308074 AK124347	121207	-	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	161199	+	BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	0.0	
chr20	61846547	61846659	reg1034807.p1	4.243	+	BC137288 BC137308 NM_080606	-208217	-	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-262478	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-262573	+	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	920	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	20738	+	TSC_hg19_v1_chr20_-_61884664 AK308958	38130	-	BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7##AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4	0.194541	
chr22	25858799	25858902	reg1000647.p2	4.243	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	-14774	+	BC139736 NM_001135772	-81307	-	AL137651 NM_182492	-100327	-	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	101949	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	102096	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	279270	+	BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB	0.0	
chr22	42565257	42565437	reg1000159.p2	4.243	+	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	-38466	-	AB463001 CU013213 CU013501 M20403 X08006 BC066877 BC067432 TSC_hg19_v1_chr22_-_42526809 BC106757 BC106758 BC126858 CR456430 BC075023 BC075024	-38540	-	TSC_hg19_v1_chr22_+_42486980 AK123630 BC039542	-78321	+	AB527391 NM_005650 NM_181492	46030	-	BC038245 TSC_hg19_v1_chr22_-_42765218	199855	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	263034	-	AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013213|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013501|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##M20403|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##X08006|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC066877|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC067432|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106757|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC106758|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC126858|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CR456430|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075023|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##BC075024|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK123630|LOC100132273|100132273|uncharacterized LOC100132273##BC039542|LOC100132273|100132273|uncharacterized LOC100132273##NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1	0.0	
chr3	32915333	32915431	reg1030807.p1	4.243	+	DQ232881 NM_001039111	-55873	+	TSC_hg19_v1_chr3_+_32726700 AK023227 AK022952 NM_015442 AK309670 BC006382 BC002931 BC002928 AK297085 AK298693 CU678296 CU678298 DQ892895 DQ896143 EU831494 EU831581	-188577	+	BX649189 TSC_hg19_v1_chr3_-_32612288 AK222573 AK222653 BC131620 AF078849 AK074348 AK293253 NM_016141	-303108	-	BC071751 NM_005508 AK292674	77718	+	TSC_hg19_v1_chr3_-_33138279 AK300021 AK126979 AK128242 NM_001039770 NM_001136238	222888	-	NM_001079811 TSC_hg19_v1_chr3_-_33138315	222951	-	DQ232881|TRIM71|131405|tripartite motif containing 71##NM_001039111|TRIM71|131405|tripartite motif containing 71##AK023227|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK022952|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##NM_015442|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK309670|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC006382|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002931|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002928|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK297085|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK298693|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ892895|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ896143|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831494|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831581|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC071751|CCR4|1233|chemokine (C-C motif) receptor 4##NM_005508|CCR4|1233|chemokine (C-C motif) receptor 4##AK292674|CCR4|1233|chemokine (C-C motif) receptor 4##AK300021|GLB1|2720|galactosidase, beta 1##AK126979|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##AK128242|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001039770|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001136238|TMPPE|643853|transmembrane protein with metallophosphoesterase domain##NM_001079811|GLB1|2720|galactosidase, beta 1	0.831001	CTCF.p2:20:0.831
chr5	180668558	180668690	reg1033278.p1	4.243	+	TSC_hg19_v1_chr5_+_180650709 BC090953	-17899	+	TSC_hg19_v1_chr5_+_180650280 AK027601 AX775793 AX775799 AX775801	-18343	+	TSC_hg19_v1_chr5_+_180650254 NM_033549 NM_201627	-18376	+	BC029996 AK301029 CR456978 CR541909 GU727632 CU689260 AM393661 DQ891422 DQ894596 AY336089 AB463707 TSC_hg19_v1_chr5_-_180670867 BC017287	2177	-	BC014256 TSC_hg19_v1_chr5_-_180670905 BC010119 BC019093 BC032006 BC035460 BC019362 BC014788 BC000366 M24194 BC021993 AK095666 AK301468 D28398 AK310916 AK222488 NM_006098 AK303316 BC000214	2279	-	AK054802 TSC_hg19_v1_chr5_-_180688115 BC007372 NM_032765 AB209243	19501	-	BC090953|TRIM41|90933|tripartite motif containing 41##AK027601|TRIM41|90933|tripartite motif containing 41##AX775793|TRIM41|90933|tripartite motif containing 41##AX775799|TRIM41|90933|tripartite motif containing 41##AX775801|TRIM41|90933|tripartite motif containing 41##NM_033549|TRIM41|90933|tripartite motif containing 41##NM_201627|TRIM41|90933|tripartite motif containing 41##BC029996|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK301029|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##CR456978|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##CR541909|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##GU727632|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AM393661|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##DQ891422|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##DQ894596|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AY336089|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC017287|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC014256|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC010119|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC019093|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC032006|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC035460|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC019362|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC014788|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC000366|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##M24194|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC021993|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK095666|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK301468|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##D28398|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK310916|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK222488|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##NM_006098|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK303316|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC000214|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK054802|TRIM52|84851|tripartite motif containing 52##BC007372|TRIM52|84851|tripartite motif containing 52##NM_032765|TRIM52|84851|tripartite motif containing 52##AB209243|TRIM52|84851|tripartite motif containing 52	0.018585	
chr7	24612498	24612678	reg1032498.p2	4.243	+	BC029497 NM_000905 AK312156 K01911 M15789	-288745	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-862672	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	-892765	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	500	+	TSC_hg19_v1_chr7_-_24797042 BC099911	184449	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	184479	-	BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5	0.0	
chr7	92367132	92367312	reg1035157.p2	4.243	+	TSC_hg19_v1_chr7_-_92219705 BC079834 BC090868 BC057771 AK125498 AL833918 BC017874 NM_001040057 NM_152789 BC062706	-147524	-	TSC_hg19_v1_chr7_-_92219660 BC032461 BC157872	-147580	-	BC104865 BC104867 BC143576 NM_032120 CR933641 BC044570 AL136619 BC020919 BC033561 CR936726 AK294626 AK294812 AF161422 BC065716 CR533549	-209116	+	AB528631 CU690894 X66365 TSC_hg19_v1_chr7_-_92462894	95545	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	95998	-	AK313491 TSC_hg19_v1_chr7_-_92465884	98676	-	BC090868|FAM133B|257415|family with sequence similarity 133, member B##BC057771|FAM133B|257415|family with sequence similarity 133, member B##AK125498|FAM133B|257415|family with sequence similarity 133, member B##AL833918|FAM133B|257415|family with sequence similarity 133, member B##BC017874|FAM133B|257415|family with sequence similarity 133, member B##NM_001040057|FAM133B|257415|family with sequence similarity 133, member B##NM_152789|FAM133B|257415|family with sequence similarity 133, member B##BC062706|FAM133B|257415|family with sequence similarity 133, member B##BC032461|FAM133B|257415|family with sequence similarity 133, member B##BC157872|FAM133B|257415|family with sequence similarity 133, member B##BC104865|RBM48|84060|RNA binding motif protein 48##BC104867|RBM48|84060|RNA binding motif protein 48##BC143576|RBM48|84060|RNA binding motif protein 48##NM_032120|RBM48|84060|RNA binding motif protein 48##CR933641|RBM48|84060|RNA binding motif protein 48##BC044570|RBM48|84060|RNA binding motif protein 48##AL136619|RBM48|84060|RNA binding motif protein 48##BC020919|RBM48|84060|RNA binding motif protein 48##BC033561|RBM48|84060|RNA binding motif protein 48##CR936726|RBM48|84060|RNA binding motif protein 48##AK294626|RBM48|84060|RNA binding motif protein 48##AK294812|RBM48|84060|RNA binding motif protein 48##AF161422|RBM48|84060|RNA binding motif protein 48##BC065716|RBM48|84060|RNA binding motif protein 48##CR533549|RBM48|84060|RNA binding motif protein 48##X66365|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6	0.0	
chr8	11403472	11403601	reg1025513.p2	4.243	+	S76617 NM_001715 BC018703 BC004473 BC038555	-51943	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-79307	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-198532	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	158184	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	223732	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	256648	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.0	
chr9	37531956	37532135	reg1031862.p2	4.243	+	TSC_hg19_v1_chr9_+_37485944 BC014331 AK023452 AK302345 AK303167 NM_022490 AK301347 AK024032 AK225050 BC017766 BC001337 CR457313 AK091294 AX746899	-46015	+	TSC_hg19_v1_chr9_-_37465448 AK292404	-66604	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	-66650	-	AF174598 AF176705 NM_012166 TSC_hg19_v1_chr9_-_37576280	44220	-	CR627326 AB435233 TSC_hg19_v1_chr9_-_37592574 BC034247	60474	-	TSC_hg19_v1_chr9_-_37592575 BC029423 NM_001001790 NM_001134484 NM_001134485	60560	-	BC014331|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK023452|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK302345|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK303167|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##NM_022490|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK301347|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK024032|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK225050|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC017766|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC001337|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##CR457313|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK091294|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5##AF174598|FBXO10|26267|F-box protein 10##AF176705|FBXO10|26267|F-box protein 10##NM_012166|FBXO10|26267|F-box protein 10##AB435233|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC034247|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC029423|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001001790|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134484|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134485|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)	0.0	
chr1	206912899	206913079	reg1026648.p2	4.242	+	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-54518	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-103879	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	-104145	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	32890	-	AY040367 NM_153758 AB463800	59237	+	AF453946 NM_013371	89232	+	BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19	0.0	
chr1	232929710	232929880	reg1034868.p1	4.242	+	TSC_hg19_v1_chr1_-_232878472 AK093200	-51338	-	BC006013 NM_020808 AY168879	-278526	-	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	-1167240	+	NM_019090 BC109122	10909	+	AK290216 TSC_hg19_v1_chr1_+_232941173 BC036663 AB037804	11356	+	AK311229 AK316591 TSC_hg19_v1_chr1_+_233086356 BC005102 NM_032324	156549	+	BC006013|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##NM_020808|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AY168879|SIPA1L2|57568|signal-induced proliferation-associated 1 like 2##AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1##NM_019090|KIAA1383|54627|KIAA1383##BC109122|KIAA1383|54627|KIAA1383##AK290216|KIAA1383|54627|KIAA1383##BC036663|KIAA1383|54627|KIAA1383##AB037804|KIAA1383|54627|KIAA1383##AK311229|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK316591|NTPCR|84284|nucleoside-triphosphatase, cancer-related##BC005102|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_032324|NTPCR|84284|nucleoside-triphosphatase, cancer-related	0.0	
chr12	96910915	96910996	reg1005402.p2	4.242	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-116638	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	-116972	-	TSC_hg19_v1_chr12_+_96588254 BC017371	-322688	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	390076	+	BC027605 NM_001135175	390288	+	TSC_hg19_v1_chr12_-_98897622 AK126817	1986672	-	AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK126817|LOC643770|643770|uncharacterized LOC643770	0.0	
chr2	42324373	42324499	reg1034299.p2	4.242	+	AB528999 TSC_hg19_v1_chr2_+_42275979	-48475	+	TSC_hg19_v1_chr2_+_42275160 NM_138370	-49304	+	AK124893 NM_001242815	-143494	-	TSC_hg19_v1_chr2_+_42396514 AB275889 NM_001145076 NM_019063 AK314702 BC146799 AF177377 BC067777 BC104647 BC140845 AB374363 AB462412 AB384933	72139	+	AF127788 BT007371 CR542208 CU675543 DQ890566 DQ893729 TSC_hg19_v1_chr2_-_42588354 AB007618 BC005251 BC007095 NM_004718	263897	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	396122	-	NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_001145076|EML4|27436|echinoderm microtubule associated protein like 4##NM_019063|EML4|27436|echinoderm microtubule associated protein like 4##AK314702|EML4|27436|echinoderm microtubule associated protein like 4##BC146799|EML4|27436|echinoderm microtubule associated protein like 4##AF177377|EML4|27436|echinoderm microtubule associated protein like 4##BC067777|EML4|27436|echinoderm microtubule associated protein like 4##BC104647|EML4|27436|echinoderm microtubule associated protein like 4##BC140845|EML4|27436|echinoderm microtubule associated protein like 4##AF127788|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BT007371|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##CR542208|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ890566|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ893729|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB007618|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC005251|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC007095|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##NM_004718|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3	0.0	
chr6	37849261	37849376	reg1028915.p1	4.242	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	-61628	+	TSC_hg19_v1_chr6_+_37787274 NM_021943	-62028	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	-183612	-	BC101354 BC101355 BC101356 BC101357 AK057507 NM_001172418 NM_152733	714484	-	AB067467 TSC_hg19_v1_chr6_-_38607611	758287	-	TSC_hg19_v1_chr6_-_38607697 BX537534	758348	-	AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##BC101354|BTBD9|114781|BTB (POZ) domain containing 9##BC101355|BTBD9|114781|BTB (POZ) domain containing 9##BC101356|BTBD9|114781|BTB (POZ) domain containing 9##BC101357|BTBD9|114781|BTB (POZ) domain containing 9##AK057507|BTBD9|114781|BTB (POZ) domain containing 9##NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9##NM_152733|BTBD9|114781|BTB (POZ) domain containing 9##AB067467|BTBD9|114781|BTB (POZ) domain containing 9##BX537534|BTBD9|114781|BTB (POZ) domain containing 9	0.385516	CTCF.p2:-42:0.386
chr10	70805425	70805605	reg1028878.p2	4.241	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-56980	+	BC104671 NM_004728 TSC_hg19_v1_chr10_+_70715925 BC009432 U41387 AK315585 BC008071 BC004182 BC017228 AB527408 CU675917	-89583	+	TSC_hg19_v1_chr10_+_70661097 CU674120 DQ892547 DQ895758	-144398	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	42321	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	42369	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	78376	+	NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##BC104671|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##NM_004728|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC009432|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##U41387|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##AK315585|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC008071|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC004182|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC017228|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##DQ892547|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##DQ895758|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##NM_002727|SRGN|5552|serglycin##D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.0	
chr1	181448566	181448732	reg1005849.p2	4.241	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-390784	+	NM_016545	-391012	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-445499	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	4051	+	BC137223 BC137224 AK128654 NM_001009992	582148	-	TSC_hg19_v1_chr1_-_182354649 AK301600	906033	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.0	
chr2	24560865	24561045	reg1033091.p2	4.241	+	BC050462 NM_001040710	-162984	+	TSC_hg19_v1_chr2_+_24346339 NM_001145710	-214596	+	TSC_hg19_v1_chr2_-_24346174 BC029523 NM_199346 BC043236 AK292601	-214711	-	TSC_hg19_v1_chr2_-_24583385 AB033082 BC146779 AF182198 AF182199 BC038963 NM_006277 NM_019595 NM_147152	22525	-	NM_003743 NM_147223 NM_147233 AJ000881 AJ000882 U59302	246422	+	TSC_hg19_v1_chr2_-_25016225 CU687260 BC073803 NM_001013663	455283	-	BC050462|C2orf84|653140|chromosome 2 open reading frame 84##NM_001040710|C2orf84|653140|chromosome 2 open reading frame 84##NM_001145710|LOC375190|375190|UPF0638 protein B##BC029523|PFN4|375189|profilin family, member 4##NM_199346|PFN4|375189|profilin family, member 4##BC043236|PFN4|375189|profilin family, member 4##AK292601|PFN4|375189|profilin family, member 4##AB033082|ITSN2|50618|intersectin 2##BC146779|ITSN2|50618|intersectin 2##AF182198|ITSN2|50618|intersectin 2##AF182199|ITSN2|50618|intersectin 2##BC038963|ITSN2|50618|intersectin 2##NM_006277|ITSN2|50618|intersectin 2##NM_019595|ITSN2|50618|intersectin 2##NM_147152|ITSN2|50618|intersectin 2##NM_003743|NCOA1|8648|nuclear receptor coactivator 1##NM_147223|NCOA1|8648|nuclear receptor coactivator 1##NM_147233|NCOA1|8648|nuclear receptor coactivator 1##AJ000881|NCOA1|8648|nuclear receptor coactivator 1##AJ000882|NCOA1|8648|nuclear receptor coactivator 1##U59302|NCOA1|8648|nuclear receptor coactivator 1##BC073803|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001013663|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1	0.095948	
chr4	155700663	155700772	reg1032169.p1	4.241	+	TSC_hg19_v1_chr4_+_155665151 AY546085 AY546086 NM_004744 AF071510	-35501	+	TSC_hg19_v1_chr4_+_155665114 AK292598	-35599	+	TSC_hg19_v1_chr4_-_155533903 NM_000509 NM_021870	-166796	-	NM_144979 AK302720 BC028588	1745	+	NM_000910 U42766	429063	+	TSC_hg19_v1_chr4_-_156297959 BC022852	597238	-	AY546085|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AY546086|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_004744|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AF071510|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##AK292598|LRAT|9227|lecithin retinol acyltransferase (phosphatidylcholine--retinol O-acyltransferase)##NM_000509|FGG|2266|fibrinogen gamma chain##NM_021870|FGG|2266|fibrinogen gamma chain##NM_144979|RBM46|166863|RNA binding motif protein 46##AK302720|RBM46|166863|RNA binding motif protein 46##BC028588|RBM46|166863|RNA binding motif protein 46##NM_000910|NPY2R|4887|neuropeptide Y receptor Y2##U42766|NPY2R|4887|neuropeptide Y receptor Y2##BC022852|MAP9|79884|microtubule-associated protein 9	0.120562	
chr4	185268680	185268823	reg1029183.p2	4.241	+	BC035035 AY358676 AK057370 NM_153343	-129686	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-440840	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-440931	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	126930	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	301850	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	302082	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr7	148959154	148959284	reg1031704.p1	4.241	+	TSC_hg19_v1_chr7_+_148936741 AK074821 NM_012256 BC022785 EU446738 CU692712	-22425	+	D30612 TSC_hg19_v1_chr7_+_148892683 NM_003575 AK299280 BC073805 AK316282 AB587508 BC055287 BC041704	-66530	+	TSC_hg19_v1_chr7_+_148844772 AY049744 AB527270 CU692152	-114460	+	TSC_hg19_v1_chr7_+_148959286 AK131504 NM_001195220 BC131569 AB528912	101	+	AK098351 AK310453 AK310396 TSC_hg19_v1_chr7_+_148982401 AK303492	23167	+	TSC_hg19_v1_chr7_-_149157908 AB033111 NM_015694	198740	-	AK074821|ZNF212|7988|zinc finger protein 212##NM_012256|ZNF212|7988|zinc finger protein 212##BC022785|ZNF212|7988|zinc finger protein 212##EU446738|ZNF212|7988|zinc finger protein 212##D30612|ZNF282|8427|zinc finger protein 282##NM_003575|ZNF282|8427|zinc finger protein 282##AK299280|ZNF282|8427|zinc finger protein 282##BC073805|ZNF282|8427|zinc finger protein 282##AK316282|ZNF282|8427|zinc finger protein 282##BC055287|ZNF282|8427|zinc finger protein 282##BC041704|ZNF282|8427|zinc finger protein 282##AY049744|ZNF398|57541|zinc finger protein 398##NM_001195220|ZNF783|100289678|zinc finger family member 783##AK098351|LOC155060|155060|AI894139 pseudogene##AK310453|LOC155060|155060|AI894139 pseudogene##AK310396|LOC155060|155060|AI894139 pseudogene##AK303492|LOC155060|155060|AI894139 pseudogene##AB033111|ZNF777|27153|zinc finger protein 777##NM_015694|ZNF777|27153|zinc finger protein 777	0.707535	CTCF.p2:-7:0.680
chr1	26868467	26868581	reg1032829.p1	4.240	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-12189	+	TSC_hg19_v1_chr1_+_26856253 AK225672	-12271	+	TSC_hg19_v1_chr1_+_26856251 NM_002953	-12279	+	TSC_hg19_v1_chr1_+_26872335 AK092955	3799	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	3834	+	NM_006015 NM_139135 AF231056	153998	+	BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK225672|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_002953|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.082791	
chr1	55969085	55969212	reg1032398.p1	4.240	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-288064	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-288112	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-463924	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	1075871	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	1075982	-	AK312439 TSC_hg19_v1_chr1_-_57045216	1076069	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.0	
chr15	65810091	65810187	reg1031011.p1	4.240	+	TSC_hg19_v1_chr15_-_65810028 AF221634 AK291057 NM_017743 NM_130434 NM_197961 BC030688	-88	-	TSC_hg19_v1_chr15_-_65809976 AK000290 AK296915	-144	-	AY354202 BC040203 NM_197960 AK302638	-532	-	TSC_hg19_v1_chr15_+_65822839 AK074898 AK299234 AF161470 BC058912 NM_016395 BC035508 BC047685 BC009056 AK225120	12650	+	TSC_hg19_v1_chr15_+_65822862 BC011443 AK027421 BC000194 AJ271091	12784	+	AL136662 TSC_hg19_v1_chr15_-_65903462 BC007991 AK296134 AK027475 AK301033 AK301742 AK310857 AK301222 AK293207 NM_001207058 NM_001207059	93377	-	AF221634|DPP8|54878|dipeptidyl-peptidase 8##AK291057|DPP8|54878|dipeptidyl-peptidase 8##NM_017743|DPP8|54878|dipeptidyl-peptidase 8##NM_130434|DPP8|54878|dipeptidyl-peptidase 8##NM_197961|DPP8|54878|dipeptidyl-peptidase 8##BC030688|DPP8|54878|dipeptidyl-peptidase 8##AK000290|DPP8|54878|dipeptidyl-peptidase 8##AK296915|DPP8|54878|dipeptidyl-peptidase 8##AY354202|DPP8|54878|dipeptidyl-peptidase 8##BC040203|DPP8|54878|dipeptidyl-peptidase 8##NM_197960|DPP8|54878|dipeptidyl-peptidase 8##AK302638|DPP8|54878|dipeptidyl-peptidase 8##AK074898|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##AK299234|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##AF161470|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##BC058912|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##NM_016395|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##BC035508|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##BC047685|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##BC009056|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##AK225120|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##BC011443|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##AK027421|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##BC000194|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##AJ271091|PTPLAD1|51495|protein tyrosine phosphatase-like A domain containing 1##AL136662|C15orf44|81556|chromosome 15 open reading frame 44##BC007991|C15orf44|81556|chromosome 15 open reading frame 44##AK296134|C15orf44|81556|chromosome 15 open reading frame 44##AK027475|C15orf44|81556|chromosome 15 open reading frame 44##AK301033|C15orf44|81556|chromosome 15 open reading frame 44##AK301742|C15orf44|81556|chromosome 15 open reading frame 44##AK310857|C15orf44|81556|chromosome 15 open reading frame 44##AK301222|C15orf44|81556|chromosome 15 open reading frame 44##AK293207|C15orf44|81556|chromosome 15 open reading frame 44##NM_001207058|C15orf44|81556|chromosome 15 open reading frame 44##NM_001207059|C15orf44|81556|chromosome 15 open reading frame 44	0.012671	
chr17	73316111	73316226	reg1032320.p1	4.240	+	TSC_hg19_v1_chr17_-_73285501 AK075239 NM_001126121 NM_001126122 NM_021734	-30639	-	BC001075 BC005120 TSC_hg19_v1_chr17_-_73285471 AL833387	-30696	-	TSC_hg19_v1_chr17_-_73267265 AF225422 NM_001242498 NM_020679	-48854	-	AB385058 AF498925 CR450363 CR541942 DQ891830 DQ894923 CU674310 L29511 TSC_hg19_v1_chr17_-_73389844	73609	-	AK091010 TSC_hg19_v1_chr17_-_73401721	85476	-	TSC_hg19_v1_chr17_-_73401738 BC000631	85566	-	AK075239|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126121|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126122|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_021734|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC001075|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC005120|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AL833387|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AF225422|MIF4GD|57409|MIF4G domain containing##NM_001242498|MIF4GD|57409|MIF4G domain containing##NM_020679|MIF4GD|57409|MIF4G domain containing##AF498925|GRB2|2885|growth factor receptor-bound protein 2##CR450363|GRB2|2885|growth factor receptor-bound protein 2##CR541942|GRB2|2885|growth factor receptor-bound protein 2##DQ891830|GRB2|2885|growth factor receptor-bound protein 2##DQ894923|GRB2|2885|growth factor receptor-bound protein 2##L29511|GRB2|2885|growth factor receptor-bound protein 2##AK091010|GRB2|2885|growth factor receptor-bound protein 2##BC000631|GRB2|2885|growth factor receptor-bound protein 2	0.0	
chr21	26934455	26934610	reg1032444.p2	4.240	+	TSC_hg19_v1_chr21_+_26934442 AF402776	-60	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-1133464	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-4563759	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	45283	-	NM_021219 TSC_hg19_v1_chr21_+_27011719	77121	+	TSC_hg19_v1_chr21_+_27011769 AK312708 AY077698 AY016009 AX772824 AK294769	77305	+	AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##AK124194|FLJ42200|400860|FLJ42200 protein##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##NM_021219|JAM2|58494|junctional adhesion molecule 2##AK312708|JAM2|58494|junctional adhesion molecule 2##AY077698|JAM2|58494|junctional adhesion molecule 2##AY016009|JAM2|58494|junctional adhesion molecule 2##AX772824|JAM2|58494|junctional adhesion molecule 2##AK294769|JAM2|58494|junctional adhesion molecule 2	0.0	
chr6	39498460	39498552	reg1029918.p2	4.240	+	AF358909 AY253145 AY253146 AY253147 BC111860 NM_001135105 NM_001135106 NM_001135107 NM_032115 EU978943	-208167	-	AF358910 CU693040 DQ891712 DQ894889 EU978944 BC025726 AY358853 AF339912 AK310582 AK315273 NM_031460 NM_001135111	-216341	-	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	-301266	-	BC117307 BC143444 BC143445 AK131471 NM_145027	194639	-	TSC_hg19_v1_chr6_+_39760140 AK091749 AX747160	261633	+	TSC_hg19_v1_chr6_+_39760151 AK310941 AB002379 NM_001201427 BC047575	261656	+	AF358909|KCNK16|83795|potassium channel, subfamily K, member 16##AY253145|KCNK16|83795|potassium channel, subfamily K, member 16##AY253146|KCNK16|83795|potassium channel, subfamily K, member 16##AY253147|KCNK16|83795|potassium channel, subfamily K, member 16##BC111860|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135105|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135106|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135107|KCNK16|83795|potassium channel, subfamily K, member 16##NM_032115|KCNK16|83795|potassium channel, subfamily K, member 16##EU978943|KCNK16|83795|potassium channel, subfamily K, member 16##AF358910|KCNK17|89822|potassium channel, subfamily K, member 17##DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17##DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17##EU978944|KCNK17|89822|potassium channel, subfamily K, member 17##BC025726|KCNK17|89822|potassium channel, subfamily K, member 17##AY358853|KCNK17|89822|potassium channel, subfamily K, member 17##AF339912|KCNK17|89822|potassium channel, subfamily K, member 17##AK310582|KCNK17|89822|potassium channel, subfamily K, member 17##AK315273|KCNK17|89822|potassium channel, subfamily K, member 17##NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17##NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17##AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5##BC117307|KIF6|221458|kinesin family member 6##BC143444|KIF6|221458|kinesin family member 6##BC143445|KIF6|221458|kinesin family member 6##AK131471|KIF6|221458|kinesin family member 6##NM_145027|KIF6|221458|kinesin family member 6##AK310941|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AB002379|DAAM2|23500|dishevelled associated activator of morphogenesis 2##NM_001201427|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC047575|DAAM2|23500|dishevelled associated activator of morphogenesis 2	0.0	
chr7	74234729	74234879	reg1030543.p1	4.240	+	BC002816 NM_000265 BC065731 AK127905 AK223217 AK292094 AK316341 AK316552 AB590366 CU678218 DQ893150 DQ896445 U25793	-46452	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	-162682	+	TSC_hg19_v1_chr7_+_74072046 BC070484	-162760	+	AY260739 AY312853 AY336980 BC047706 BC061590 AK225845 AY336979 BC136849 BC067859 AK291431 AY336981 BC038098 NM_173537 AK098269	33035	-	TSC_hg19_v1_chr7_-_74306679 BC002581	71871	-	TSC_hg19_v1_chr7_-_74306685 AK303473 AK307228 AK309007	71879	-	BC002816|NCF1|653361|neutrophil cytosolic factor 1##NM_000265|NCF1|653361|neutrophil cytosolic factor 1##BC065731|NCF1|653361|neutrophil cytosolic factor 1##AK127905|NCF1|653361|neutrophil cytosolic factor 1##AK223217|NCF1|653361|neutrophil cytosolic factor 1##AK292094|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316341|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316552|NCF1|653361|neutrophil cytosolic factor 1##DQ893150|NCF1|653361|neutrophil cytosolic factor 1##DQ896445|NCF1|653361|neutrophil cytosolic factor 1##U25793|NCF1|653361|neutrophil cytosolic factor 1##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##AY260739|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336980|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC047706|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC061590|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336979|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AY336981|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC038098|GTF2IRD2|84163|GTF2I repeat domain containing 2##NM_173537|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC002581|STAG3L2|442582|stromal antigen 3-like 2##AK303473|STAG3L2|442582|stromal antigen 3-like 2##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2	0.0	
chr9	133814601	133814671	reg1030357.p1	4.240	+	AK300287 NM_001145106 TSC_hg19_v1_chr9_-_133814549	-145	-	BC032953 NM_032843 TSC_hg19_v1_chr9_-_133814253	-392	-	BC112892 AY358311 AK292489 TSC_hg19_v1_chr9_-_133814106	-585	-	AF041835 NM_006059 TSC_hg19_v1_chr9_+_133884573 AK075536	69914	+	NM_001185095 NM_001185096 NM_031426 TSC_hg19_v1_chr9_+_133971890	157242	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	157322	+	AK300287|FIBCD1|84929|fibrinogen C domain containing 1##NM_001145106|FIBCD1|84929|fibrinogen C domain containing 1##BC032953|FIBCD1|84929|fibrinogen C domain containing 1##NM_032843|FIBCD1|84929|fibrinogen C domain containing 1##BC112892|FIBCD1|84929|fibrinogen C domain containing 1##AY358311|FIBCD1|84929|fibrinogen C domain containing 1##AK292489|FIBCD1|84929|fibrinogen C domain containing 1##AF041835|LAMC3|10319|laminin, gamma 3##NM_006059|LAMC3|10319|laminin, gamma 3##AK075536|LAMC3|10319|laminin, gamma 3##NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like##NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like##NM_031426|AIF1L|83543|allograft inflammatory factor 1-like##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like	0.032507	
chr18	49194940	49195059	reg1000578.p3	4.239	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-470959	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-471287	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-471773	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	671542	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	672114	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2495993	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.0	
chr20	18698942	18699053	reg1029852.p1	4.239	+	TSC_hg19_v1_chr20_+_18568661 NM_080820 BC045167 AK074304 BC100923 BC100924 BC100925 BC100926 AK291440 AF332356 CU692252	-130347	+	BC092494 AK024594 BC015983 TSC_hg19_v1_chr20_+_18548094 BC039422 BC127753 BC127754 BC141963 BC141964 BC150559 BC150560 AF147354	-150897	+	TSC_hg19_v1_chr20_+_18488583 AK299171 BC001575 AK299513 NM_001172745 BC005404	-210371	+	AF418568 AF418570 AX721297 NM_178483 AK130970 AY248902 BC105121 BC112024	95401	+	NM_001242671	111841	-	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	494288	+	NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC092494|LINC00493|388789|long intergenic non-protein coding RNA 493##AK024594|LINC00493|388789|long intergenic non-protein coding RNA 493##BC015983|LINC00493|388789|long intergenic non-protein coding RNA 493##BC039422|LINC00493|388789|long intergenic non-protein coding RNA 493##BC127753|LINC00493|388789|long intergenic non-protein coding RNA 493##BC127754|LINC00493|388789|long intergenic non-protein coding RNA 493##BC141963|LINC00493|388789|long intergenic non-protein coding RNA 493##BC141964|LINC00493|388789|long intergenic non-protein coding RNA 493##BC150559|LINC00493|388789|long intergenic non-protein coding RNA 493##BC150560|LINC00493|388789|long intergenic non-protein coding RNA 493##AF147354|LINC00493|388789|long intergenic non-protein coding RNA 493##AK299171|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC001575|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AK299513|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_001172745|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC005404|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AF418568|C20orf79|140856|chromosome 20 open reading frame 79##AF418570|C20orf79|140856|chromosome 20 open reading frame 79##NM_178483|C20orf79|140856|chromosome 20 open reading frame 79##AK130970|C20orf79|140856|chromosome 20 open reading frame 79##AY248902|C20orf79|140856|chromosome 20 open reading frame 79##BC105121|C20orf79|140856|chromosome 20 open reading frame 79##BC112024|C20orf79|140856|chromosome 20 open reading frame 79##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3	0.997588	CTCF.p2:-24:0.998
chr3	171532023	171532204	reg1027977.p2	4.239	+	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	-3858	-	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-354042	-	NM_000340	-787346	-	NM_001164436 AK026825	29035	+	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	225302	+	TSC_hg19_v1_chr3_+_171757437 AK127826	225321	+	AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B##AK127826|FNDC3B|64778|fibronectin type III domain containing 3B	0.0	
chr5	133839155	133839308	reg1035254.p2	4.239	+	TSC_hg19_v1_chr5_-_133747599 NM_080656	-91632	-	TSC_hg19_v1_chr5_-_133747573 BC018086 BC008293	-91677	-	TSC_hg19_v1_chr5_+_133707159 BC008404 BC008470 AK312012 X53251 BC005979 AB590169 DQ893113 DQ896387 BT007071 CR407634	-132035	+	TSC_hg19_v1_chr5_+_133842276 BC032795	3059	+	TSC_hg19_v1_chr5_+_133861359 AK056471 BC021962 AK292635 AK074123	22132	+	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	22574	+	NM_080656|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like##BC018086|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like##BC008293|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like##BC008404|UBE2B|7320|ubiquitin-conjugating enzyme E2B##BC008470|UBE2B|7320|ubiquitin-conjugating enzyme E2B##AK312012|UBE2B|7320|ubiquitin-conjugating enzyme E2B##X53251|UBE2B|7320|ubiquitin-conjugating enzyme E2B##BC005979|UBE2B|7320|ubiquitin-conjugating enzyme E2B##DQ893113|UBE2B|7320|ubiquitin-conjugating enzyme E2B##DQ896387|UBE2B|7320|ubiquitin-conjugating enzyme E2B##BT007071|UBE2B|7320|ubiquitin-conjugating enzyme E2B##CR407634|UBE2B|7320|ubiquitin-conjugating enzyme E2B##AK056471|PHF15|23338|PHD finger protein 15##BC021962|PHF15|23338|PHD finger protein 15##AK292635|PHF15|23338|PHD finger protein 15##AK074123|PHF15|23338|PHD finger protein 15##D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15	0.0	
chr5	92956336	92956432	reg1032864.p1	4.239	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	-35716	+	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	-37401	+	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	-39421	-	AK309742 TSC_hg19_v1_chr5_-_92957232	827	-	CU688688 EU446850 BC029532 AB527965 AK098546 NM_153216	120868	-	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	490936	-	BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##EU446850|POU5F2|134187|POU domain class 5, transcription factor 2##BC029532|POU5F2|134187|POU domain class 5, transcription factor 2##AK098546|POU5F2|134187|POU domain class 5, transcription factor 2##NM_153216|POU5F2|134187|POU domain class 5, transcription factor 2##AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A	0.0	
chr11	95220623	95220804	reg1028887.p1	4.238	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	-256409	-	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-397701	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-420305	+	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	301938	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	302020	-	AK021591 TSC_hg19_v1_chr11_-_95522975 BC026013 NM_144664	302253	-	BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B##AK021591|FAM76B|143684|family with sequence similarity 76, member B##BC026013|FAM76B|143684|family with sequence similarity 76, member B##NM_144664|FAM76B|143684|family with sequence similarity 76, member B	0.0	
chr1	249200364	249200544	reg1018397.p1	4.238	+	TSC_hg19_v1_chr1_+_249200433 AK123219 BC063785 NM_001017434 NM_170725 BX647065 AK298248	-31	+	TSC_hg19_v1_chr1_-_249153285 NM_001193328 NM_017865	-47152	-	AK309421 AL133100 TSC_hg19_v1_chr1_-_249153150 AK302187 NM_001136036 AK001070 AK298899 BC002948 AK000538 AK225535	-47366	-	None	None	None	None	None	None	None	None	None	AK123219|PGBD2|267002|piggyBac transposable element derived 2##BC063785|PGBD2|267002|piggyBac transposable element derived 2##NM_001017434|PGBD2|267002|piggyBac transposable element derived 2##NM_170725|PGBD2|267002|piggyBac transposable element derived 2##BX647065|PGBD2|267002|piggyBac transposable element derived 2##AK298248|PGBD2|267002|piggyBac transposable element derived 2##NM_001193328|ZNF692|55657|zinc finger protein 692##NM_017865|ZNF692|55657|zinc finger protein 692##AK309421|ZNF692|55657|zinc finger protein 692##AL133100|ZNF692|55657|zinc finger protein 692##AK302187|ZNF692|55657|zinc finger protein 692##NM_001136036|ZNF692|55657|zinc finger protein 692##AK001070|ZNF692|55657|zinc finger protein 692##AK298899|ZNF692|55657|zinc finger protein 692##BC002948|ZNF692|55657|zinc finger protein 692##AK000538|ZNF692|55657|zinc finger protein 692##AK225535|ZNF692|55657|zinc finger protein 692	0.034928	
chr15	41785347	41785528	reg1027557.p1	4.238	+	TSC_hg19_v1_chr15_+_41709329 NM_015138 AK292302 D87440 BC015052 AB383821	-76077	+	AF151823 BC000780 NM_016013 AK310033 AK310983 AK309889 TSC_hg19_v1_chr15_-_41694659	-90775	-	CU680432 AF305711 TSC_hg19_v1_chr15_+_41625177	-160272	+	NM_002220 TSC_hg19_v1_chr15_+_41786071 BC026331 X54938 AB463780	653	+	BC143903 D16105 AK314006 BC045607 X60702 AK296892 NM_001135685 NM_002344 NM_206961	20601	-	AB037824 TSC_hg19_v1_chr15_-_41836456 AK290224 BC000246	51012	-	NM_015138|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK292302|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##D87440|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC015052|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF151823|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##BC000780|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##NM_016013|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK310033|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK310983|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK309889|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AF305711|NUSAP1|51203|nucleolar and spindle associated protein 1##NM_002220|ITPKA|3706|inositol-trisphosphate 3-kinase A##BC026331|ITPKA|3706|inositol-trisphosphate 3-kinase A##X54938|ITPKA|3706|inositol-trisphosphate 3-kinase A##BC143903|LTK|4058|leukocyte receptor tyrosine kinase##D16105|LTK|4058|leukocyte receptor tyrosine kinase##AK314006|LTK|4058|leukocyte receptor tyrosine kinase##BC045607|LTK|4058|leukocyte receptor tyrosine kinase##X60702|LTK|4058|leukocyte receptor tyrosine kinase##AK296892|LTK|4058|leukocyte receptor tyrosine kinase##NM_001135685|LTK|4058|leukocyte receptor tyrosine kinase##NM_002344|LTK|4058|leukocyte receptor tyrosine kinase##NM_206961|LTK|4058|leukocyte receptor tyrosine kinase##AB037824|RPAP1|26015|RNA polymerase II associated protein 1##AK290224|RPAP1|26015|RNA polymerase II associated protein 1##BC000246|RPAP1|26015|RNA polymerase II associated protein 1	0.0	
chr15	91416263	91416411	reg1036832.p2	4.238	+	NM_002569 X17094	-4453	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	-155723	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-343141	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	11364	+	DQ891350 DQ894530 AB590559 AY513654 AY513655 AY513656 AY513657 NM_001143783 NM_001143784	11936	+	TSC_hg19_v1_chr15_+_91445984 D55649 L28821	29639	+	NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene##DQ891350|FES|2242|feline sarcoma oncogene##DQ894530|FES|2242|feline sarcoma oncogene##AY513654|FES|2242|feline sarcoma oncogene##AY513655|FES|2242|feline sarcoma oncogene##AY513656|FES|2242|feline sarcoma oncogene##AY513657|FES|2242|feline sarcoma oncogene##NM_001143783|FES|2242|feline sarcoma oncogene##NM_001143784|FES|2242|feline sarcoma oncogene##D55649|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##L28821|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	0.0	
chr20	45887447	45887627	reg1027514.p1	4.238	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	-363985	+	TSC_hg19_v1_chr20_+_45523505 BC008803	-364029	+	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	-364255	+	TSC_hg19_v1_chr20_-_45927496 BC030721	40032	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	89110	-	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	97951	-	AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8	0.0	
chr5	148507713	148507845	reg1038855.p1	4.238	+	AB075865 AL832651 AK300420 TSC_hg19_v1_chr5_-_148442626 BC113879 BC114486 AY341075 AB070620 NM_024577	-65108	-	NM_000024 TSC_hg19_v1_chr5_+_148206185 AK313151 BC012481 AK223025 BC073856 BC063486 X04827	-301593	+	AK308471 TSC_hg19_v1_chr5_-_148034091	-473689	-	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	13411	+	TSC_hg19_v1_chr5_+_148651421 NM_001146337 NM_152406 BC040723	143635	+	TSC_hg19_v1_chr5_+_148651443 AK095980 AK074185 BC125093 BC125094	143683	+	AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface##X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3##NM_001146337|AFAP1L1|134265|actin filament associated protein 1-like 1##NM_152406|AFAP1L1|134265|actin filament associated protein 1-like 1##BC040723|AFAP1L1|134265|actin filament associated protein 1-like 1##AK095980|AFAP1L1|134265|actin filament associated protein 1-like 1##AK074185|AFAP1L1|134265|actin filament associated protein 1-like 1##BC125093|AFAP1L1|134265|actin filament associated protein 1-like 1##BC125094|AFAP1L1|134265|actin filament associated protein 1-like 1	1.021866	CTCF.p2:5:0.992
chr7	119122422	119122537	reg1033616.p2	4.238	+	NM_019644 AK302407	-1257745	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-1298308	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-1608936	-	AK307139 AB028967 NM_012281	791225	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	1375541	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	1375681	-	NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12	0.0	
chr7	127744078	127744258	reg1036546.p1	4.238	+	BC111561 BC111745 AF196976 AJ297858 NM_022143 AK172751 TSC_hg19_v1_chr7_-_127671066 AK314047	-73132	-	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	-451832	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	-451932	+	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	137165	+	CU680694 TSC_hg19_v1_chr7_-_127983862	239686	-	TSC_hg19_v1_chr7_-_127983944 BC013889 AK222716 AK300500 AK295976 AK001239 NM_001166135 NM_018077	239768	-	BC111561|LRRC4|64101|leucine rich repeat containing 4##BC111745|LRRC4|64101|leucine rich repeat containing 4##AF196976|LRRC4|64101|leucine rich repeat containing 4##AJ297858|LRRC4|64101|leucine rich repeat containing 4##NM_022143|LRRC4|64101|leucine rich repeat containing 4##AK172751|LRRC4|64101|leucine rich repeat containing 4##AK314047|LRRC4|64101|leucine rich repeat containing 4##BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin##BC013889|RBM28|55131|RNA binding motif protein 28##AK222716|RBM28|55131|RNA binding motif protein 28##AK300500|RBM28|55131|RNA binding motif protein 28##AK001239|RBM28|55131|RNA binding motif protein 28##NM_001166135|RBM28|55131|RNA binding motif protein 28##NM_018077|RBM28|55131|RNA binding motif protein 28	0.0	
chr7	74074123	74074278	reg1026373.p1	4.238	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	-2078	+	TSC_hg19_v1_chr7_+_74072046 BC070484	-2156	+	AK292832 TSC_hg19_v1_chr7_+_74072028 AF015553 NM_001163636 NM_001518 NM_032999 NM_033000 NM_033001	-2179	+	BC002816 NM_000265 BC065731 AK127905 AK223217 AK292094 AK316341 AK316552 AB590366 CU678218 DQ893150 DQ896445 U25793	114152	+	AY260739 AY312853 AY336980 BC047706 BC061590 AK225845 AY336979 BC136849 BC067859 AK291431 AY336981 BC038098 NM_173537 AK098269	193639	-	TSC_hg19_v1_chr7_-_74306679 BC002581	232475	-	BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##AK292832|GTF2I|2969|general transcription factor IIi##AF015553|GTF2I|2969|general transcription factor IIi##NM_001163636|GTF2I|2969|general transcription factor IIi##NM_001518|GTF2I|2969|general transcription factor IIi##NM_032999|GTF2I|2969|general transcription factor IIi##NM_033000|GTF2I|2969|general transcription factor IIi##NM_033001|GTF2I|2969|general transcription factor IIi##BC002816|NCF1|653361|neutrophil cytosolic factor 1##NM_000265|NCF1|653361|neutrophil cytosolic factor 1##BC065731|NCF1|653361|neutrophil cytosolic factor 1##AK127905|NCF1|653361|neutrophil cytosolic factor 1##AK223217|NCF1|653361|neutrophil cytosolic factor 1##AK292094|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316341|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316552|NCF1|653361|neutrophil cytosolic factor 1##DQ893150|NCF1|653361|neutrophil cytosolic factor 1##DQ896445|NCF1|653361|neutrophil cytosolic factor 1##U25793|NCF1|653361|neutrophil cytosolic factor 1##AY260739|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336980|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC047706|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC061590|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336979|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AY336981|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC038098|GTF2IRD2|84163|GTF2I repeat domain containing 2##NM_173537|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC002581|STAG3L2|442582|stromal antigen 3-like 2	0.0	
chr10	74055641	74055821	reg1026017.p1	4.237	+	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	-21907	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-79620	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-79943	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	58947	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	59195	-	AK298347 AK296086 TSC_hg19_v1_chr10_-_74283734 NM_001195519	227988	-	NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK298347|MICU1|10367|mitochondrial calcium uptake 1##AK296086|MICU1|10367|mitochondrial calcium uptake 1##NM_001195519|MICU1|10367|mitochondrial calcium uptake 1	0.0	
chr14	35451479	35451602	reg1024620.p1	4.237	+	AB032252 NM_013448 NM_182648	-106688	-	TSC_hg19_v1_chr14_-_35344546 AF161435	-107003	-	TSC_hg19_v1_chr14_-_35344525 BC108711	-107033	-	NM_001146282 NM_003136 TSC_hg19_v1_chr14_+_35452178 AK312853	603	+	TSC_hg19_v1_chr14_+_35452224 AK293319 AK300824 BC003389 BC000652 U51920	748	+	NM_001079519	62572	+	AB032252|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##NM_013448|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##NM_182648|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##AF161435|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##BC108711|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##NM_001146282|SRP54|6729|signal recognition particle 54kDa##NM_003136|SRP54|6729|signal recognition particle 54kDa##AK312853|SRP54|6729|signal recognition particle 54kDa##AK293319|SRP54|6729|signal recognition particle 54kDa##AK300824|SRP54|6729|signal recognition particle 54kDa##BC003389|SRP54|6729|signal recognition particle 54kDa##BC000652|SRP54|6729|signal recognition particle 54kDa##U51920|SRP54|6729|signal recognition particle 54kDa##NM_001079519|FAM177A1|283635|family with sequence similarity 177, member A1	0.0	
chr21	15906529	15906710	reg1029997.p2	4.237	+	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-151146	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-318122	+	AB463838 AY197607 NM_198996	-327371	-	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	12030	-	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	530598	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	1195706	+	AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AY197607|LIPI|149998|lipase, member I##NM_198996|LIPI|149998|lipase, member I##BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25	0.0	
chr6	92122412	92122513	reg1035977.p2	4.237	+	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-825624	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-825779	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-1115850	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	2006721	-	TSC_hg19_v1_chr6_-_96025325 BC047582	3902827	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	3902939	+	BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha	0.058784	
chr10	124899993	124900106	reg1034997.p1	4.236	+	NM_001105574 TSC_hg19_v1_chr10_+_124895620	-4456	+	TSC_hg19_v1_chr10_+_124768521 BC013756 U12778 AK314241 AB527625 CU680672 AL831821	-131521	+	TSC_hg19_v1_chr10_+_124768471 NM_001609 AK298638	-131601	+	NM_005519	7588	+	NM_001007793 NM_004725 TSC_hg19_v1_chr10_+_124913846	13756	+	TSC_hg19_v1_chr10_+_124913883 BX647392	13823	+	NM_001105574|HMX3|340784|H6 family homeobox 3##BC013756|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##U12778|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK314241|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AL831821|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##NM_001609|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK298638|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##NM_005519|HMX2|3167|H6 family homeobox 2##NM_001007793|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##NM_004725|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BX647392|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)	0.0	
chr2	242958823	242958931	reg1029344.p1	4.236	+	AK090909 AX746675 BC113517 BC113519 NM_173821	-146995	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	-157853	-	AK091038 AX746745 NM_001167599 NM_001167602 NM_080741 BC012899	-206827	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	71982	+	None	None	None	None	None	None	AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1##AK091038|NEU4|129807|sialidase 4##NM_001167599|NEU4|129807|sialidase 4##NM_001167602|NEU4|129807|sialidase 4##NM_080741|NEU4|129807|sialidase 4##BC012899|NEU4|129807|sialidase 4##AK298283|LOC728323|728323|uncharacterized LOC728323	0.682633	CTCF.p2:14:0.683
chr4	6194039	6194130	reg1013054.p2	4.236	+	DQ206871 TSC_hg19_v1_chr4_-_5894794 NM_001014809	-299340	-	BC009987 TSC_hg19_v1_chr4_-_5891940	-302156	-	TSC_hg19_v1_chr4_-_5890302 NM_001313	-303775	-	TSC_hg19_v1_chr4_-_6202277 AK294356 AK307983 AK056126 AM412307 AM412308 AM412309 AM412310 BC026343 NM_001099433 NM_144720	8200	-	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	77484	+	Y18064 TSC_hg19_v1_chr4_+_6271588	77510	+	DQ206871|CRMP1|1400|collapsin response mediator protein 1##NM_001014809|CRMP1|1400|collapsin response mediator protein 1##BC009987|CRMP1|1400|collapsin response mediator protein 1##NM_001313|CRMP1|1400|collapsin response mediator protein 1##AK294356|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK307983|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK056126|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412307|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412308|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412309|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412310|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##BC026343|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_001099433|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_144720|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)	0.0	
chr4	756433	756614	reg1034613.p1	4.236	+	TSC_hg19_v1_chr4_+_699570 AK225892 NM_006315 AK057124 AK300290 AK125801	-56893	+	TSC_hg19_v1_chr4_-_683107 AK292010	-73407	-	TSC_hg19_v1_chr4_-_682967 BC030246 NM_032219 AK025922	-73498	-	TSC_hg19_v1_chr4_-_775606 BC040652 AK055583	19099	-	AK126578 TSC_hg19_v1_chr4_-_819894 AK311921 AB593095 BC002471 NM_006651	63402	-	TSC_hg19_v1_chr4_-_925898 BT007015 D88435	169398	-	AK225892|PCGF3|10336|polycomb group ring finger 3##NM_006315|PCGF3|10336|polycomb group ring finger 3##AK057124|PCGF3|10336|polycomb group ring finger 3##AK300290|PCGF3|10336|polycomb group ring finger 3##AK125801|PCGF3|10336|polycomb group ring finger 3##AK292010|MFSD7|84179|major facilitator superfamily domain containing 7##BC030246|MFSD7|84179|major facilitator superfamily domain containing 7##NM_032219|MFSD7|84179|major facilitator superfamily domain containing 7##AK025922|MFSD7|84179|major facilitator superfamily domain containing 7##BC040652|LOC100129917|100129917|uncharacterized LOC100129917##AK055583|LOC100129917|100129917|uncharacterized LOC100129917##AK126578|CPLX1|10815|complexin 1##AK311921|CPLX1|10815|complexin 1##AB593095|CPLX1|10815|complexin 1##BC002471|CPLX1|10815|complexin 1##NM_006651|CPLX1|10815|complexin 1##BT007015|GAK|2580|cyclin G associated kinase##D88435|GAK|2580|cyclin G associated kinase	0.0	
chr7	54907447	54907544	reg1031415.p1	4.236	+	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	-80574	-	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	-80616	-	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	-297413	+	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	179250	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	179451	+	AK095857 NM_018697	525645	+	AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit##NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor##AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)	1.130928	CTCF.p2:0:0.995
chr1	25353689	25353870	reg1024018.p2	4.235	+	BC013362 AK310945 NM_001031680 AF022726	-62237	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-96993	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-97040	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	205208	-	BC065040 TSC_hg19_v1_chr1_-_25573922	220144	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	220194	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr13	33762571	33762725	reg1025698.p1	4.235	+	AY082590 BC046563 NM_001243466 NM_178007	-2433	-	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-172125	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-601965	+	AL049801 AY082591 AK091804 NM_001243474 NM_052851	17516	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	97219	-	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	162120	-	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr13	78995088	78995267	reg1027024.p2	4.235	+	D90402 NM_000115 S57283 AF308156	-445461	-	AF114165 NM_001201397	-501275	-	AF114163 AF114164 TSC_hg19_v1_chr13_-_78493569	-501626	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	175105	+	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	182546	-	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	238116	-	D90402|EDNRB|1910|endothelin receptor type B##NM_000115|EDNRB|1910|endothelin receptor type B##S57283|EDNRB|1910|endothelin receptor type B##AF114165|EDNRB|1910|endothelin receptor type B##NM_001201397|EDNRB|1910|endothelin receptor type B##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219	0.0	
chr7	101007534	101007601	reg1000199.p2	4.235	+	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	-1350	+	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	-42529	-	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-112001	-	BC002778 NM_138403	265008	-	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	451642	+	M74099 NM_181552	453314	+	NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1	0.0	
chr8	94654055	94654165	reg1033242.p1	4.235	+	BC089453 NM_001242668	-475032	-	NM_001191035 TSC_hg19_v1_chr8_-_93978373 BC031029 AK097956 BC110326 DQ351291 NM_001171795 NM_001171796 NM_001171797 NM_001171798 NM_001171799	-675788	-	AK096398 NM_001191036	-676345	-	BC037909 TSC_hg19_v1_chr8_-_94712710	58576	-	BC014598 TSC_hg19_v1_chr8_+_94712788 BC108707 NM_145269 CR627475 DQ327715 DQ327716 AK096298 CU677061	58694	+	BC039260 TSC_hg19_v1_chr8_-_94753192	99081	-	BC089453|LOC389676|389676|uncharacterized LOC389676##NM_001242668|LOC389676|389676|uncharacterized LOC389676##NM_001191035|C8orf83|286144|chromosome 8 open reading frame 83##BC031029|C8orf83|286144|chromosome 8 open reading frame 83##AK097956|C8orf83|286144|chromosome 8 open reading frame 83##BC110326|C8orf83|286144|chromosome 8 open reading frame 83##DQ351291|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171795|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171796|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171797|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171798|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171799|C8orf83|286144|chromosome 8 open reading frame 83##AK096398|C8orf83|286144|chromosome 8 open reading frame 83##NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83##BC037909|LOC642924|642924|uncharacterized LOC642924##BC014598|FAM92A1|137392|family with sequence similarity 92, member A1##BC108707|FAM92A1|137392|family with sequence similarity 92, member A1##NM_145269|FAM92A1|137392|family with sequence similarity 92, member A1##CR627475|FAM92A1|137392|family with sequence similarity 92, member A1##DQ327715|FAM92A1|137392|family with sequence similarity 92, member A1##DQ327716|FAM92A1|137392|family with sequence similarity 92, member A1##AK096298|FAM92A1|137392|family with sequence similarity 92, member A1##BC039260|RBM12B|389677|RNA binding motif protein 12B	0.993604	CTCF.p2:6:0.994
chr9	132342695	132342838	reg1029315.p2	4.235	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	-91325	+	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	-91412	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-259471	+	BC112353 AK093122 AX747938 NM_199350	40271	-	TSC_hg19_v1_chr9_+_132388441 NM_014064 AK290957 AK292332 AK298840 AK307056 AK313829	45659	+	TSC_hg19_v1_chr9_+_132388461 BC001396 BC033234 AF110776	45704	+	BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50##NM_014064|METTL11A|28989|methyltransferase like 11A##AK290957|METTL11A|28989|methyltransferase like 11A##AK292332|METTL11A|28989|methyltransferase like 11A##AK298840|METTL11A|28989|methyltransferase like 11A##AK307056|METTL11A|28989|methyltransferase like 11A##AK313829|METTL11A|28989|methyltransferase like 11A##BC001396|METTL11A|28989|methyltransferase like 11A##BC033234|METTL11A|28989|methyltransferase like 11A##AF110776|METTL11A|28989|methyltransferase like 11A	0.0	
chrX	11776599	11776697	reg1031388.p2	4.235	+	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	-305	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	-92828	-	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	-465106	+	NM_001193270 AK300814	69	+	NM_006800 AK025642	1099	+	AB002314 NM_014728 AK289694	379942	+	AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6##AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4	0.997294	CTCF.p2:-27:0.997
chr1	154738627	154738702	reg1026975.p1	4.234	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-138199	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-138250	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-157964	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	93598	-	BX649146 TSC_hg19_v1_chr1_-_154840541	101837	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	104082	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.0	
chr11	73702634	73702814	reg1028167.p1	4.234	+	TSC_hg19_v1_chr11_-_73694300 AK025742	-8381	-	TSC_hg19_v1_chr11_-_73693886 AK222540 AK222557 NM_003355	-8839	-	U94592 BC011737 TSC_hg19_v1_chr11_-_73693862	-8880	-	NM_003356 NM_022803	17557	-	TSC_hg19_v1_chr11_-_73881923 AB231764 AK092089 AX747350 BC037429 NM_015531	179344	-	TSC_hg19_v1_chr11_+_73882299 AK022725	179558	+	AK025742|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##BC011737|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003356|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##NM_022803|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3##AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3##NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3##AK022725|PPME1|51400|protein phosphatase methylesterase 1	0.0	
chr1	230256701	230256826	reg1031999.p1	4.234	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-53767	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-53821	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-494749	+	BC150638 NM_024554	256627	-	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	521433	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	521470	+	AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2	0.231577	CTCF.p2:39:0.232
chr19	49496488	49496645	reg1034260.p1	4.234	+	TSC_hg19_v1_chr19_-_49496564 AK223579 AK291672 AK294349 AK300369 AK302738 AK303712	-2	-	TSC_hg19_v1_chr19_-_49496541 J04501 BC007688 BC002617	-32	-	CU675761 CU678426 AB590881 TSC_hg19_v1_chr19_-_49496515 U32573	-124	-	BC003182 TSC_hg19_v1_chr19_-_49496567 NM_001161587 NM_002103	43	-	TSC_hg19_v1_chr19_+_49497154 AK301344 AK027762 AK074542 AB024301 BC004531 BC008355 NM_006666 AF124607 AF151804 AF155138 AM393635 BC000428 Y18417 AK057498 AL136743 AB464184 CU678752 CU678925 DQ891392 DQ894568	578	+	NM_000894	23780	-	AK223579|GYS1|2997|glycogen synthase 1 (muscle)##AK291672|GYS1|2997|glycogen synthase 1 (muscle)##AK294349|GYS1|2997|glycogen synthase 1 (muscle)##AK300369|GYS1|2997|glycogen synthase 1 (muscle)##AK302738|GYS1|2997|glycogen synthase 1 (muscle)##AK303712|GYS1|2997|glycogen synthase 1 (muscle)##J04501|GYS1|2997|glycogen synthase 1 (muscle)##BC007688|GYS1|2997|glycogen synthase 1 (muscle)##BC002617|GYS1|2997|glycogen synthase 1 (muscle)##U32573|GYS1|2997|glycogen synthase 1 (muscle)##BC003182|GYS1|2997|glycogen synthase 1 (muscle)##NM_001161587|GYS1|2997|glycogen synthase 1 (muscle)##NM_002103|GYS1|2997|glycogen synthase 1 (muscle)##AK301344|RUVBL2|10856|RuvB-like 2 (E. coli)##AK027762|RUVBL2|10856|RuvB-like 2 (E. coli)##AK074542|RUVBL2|10856|RuvB-like 2 (E. coli)##AB024301|RUVBL2|10856|RuvB-like 2 (E. coli)##BC004531|RUVBL2|10856|RuvB-like 2 (E. coli)##BC008355|RUVBL2|10856|RuvB-like 2 (E. coli)##NM_006666|RUVBL2|10856|RuvB-like 2 (E. coli)##AF124607|RUVBL2|10856|RuvB-like 2 (E. coli)##AF151804|RUVBL2|10856|RuvB-like 2 (E. coli)##AF155138|RUVBL2|10856|RuvB-like 2 (E. coli)##AM393635|RUVBL2|10856|RuvB-like 2 (E. coli)##BC000428|RUVBL2|10856|RuvB-like 2 (E. coli)##Y18417|RUVBL2|10856|RuvB-like 2 (E. coli)##AK057498|RUVBL2|10856|RuvB-like 2 (E. coli)##AL136743|RUVBL2|10856|RuvB-like 2 (E. coli)##DQ891392|RUVBL2|10856|RuvB-like 2 (E. coli)##DQ894568|RUVBL2|10856|RuvB-like 2 (E. coli)##NM_000894|LHB|3972|luteinizing hormone beta polypeptide	0.728036	CTCF.p2:41:0.728
chr19	59010917	59011075	reg1025827.p1	4.234	+	AY280800 TSC_hg19_v1_chr19_+_58987792 AK000633 AY279351 NM_017908 BC017206 AK026153	-23213	+	AK092341 TSC_hg19_v1_chr19_+_58978664	-32329	+	TSC_hg19_v1_chr19_+_58978445 NM_014347 BC007717 AF060503	-32568	+	AB527212 TSC_hg19_v1_chr19_-_59023360 AK298446 AK123036 NM_012254	12381	-	BC024738 NM_032792 TSC_hg19_v1_chr19_-_59030968	19957	-	TSC_hg19_v1_chr19_-_59031178 AK130056 AK027392	20192	-	AY280800|ZNF446|55663|zinc finger protein 446##AK000633|ZNF446|55663|zinc finger protein 446##AY279351|ZNF446|55663|zinc finger protein 446##NM_017908|ZNF446|55663|zinc finger protein 446##BC017206|ZNF446|55663|zinc finger protein 446##AK026153|ZNF446|55663|zinc finger protein 446##AK092341|ZNF324|25799|zinc finger protein 324##NM_014347|ZNF324|25799|zinc finger protein 324##BC007717|ZNF324|25799|zinc finger protein 324##AF060503|ZNF324|25799|zinc finger protein 324##AK298446|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##AK123036|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##NM_012254|SLC27A5|10998|solute carrier family 27 (fatty acid transporter), member 5##BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45##NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45##AK027392|ZBTB45|84878|zinc finger and BTB domain containing 45	0.0	
chr2	136997648	136997719	reg1032371.p1	4.234	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-122007	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-123885	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-254467	-	TSC_hg19_v1_chr2_+_137523114 AK299929	525433	+	NM_001080427	750778	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1724251	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.0	
chr2	207257118	207257299	reg1005843.p2	4.234	+	TSC_hg19_v1_chr2_+_207139414 AK127271 NM_020923	-117741	+	AK312917 BC067833 AK290976 NM_001098199 NM_005279	-174510	-	TSC_hg19_v1_chr2_+_207024617 AK291910 AK310096 D28350 BC067787 BC029316 BC004931 AB529032 CU688340 BT007079 CR456825	-232550	+	TSC_hg19_v1_chr2_+_207308286 AB009672 NM_003812 BC132763 BC132765	51125	+	AK129906 TSC_hg19_v1_chr2_+_207406857	149628	+	NM_001102659	249933	+	AK127271|ZDBF2|57683|zinc finger, DBF-type containing 2##NM_020923|ZDBF2|57683|zinc finger, DBF-type containing 2##AK312917|GPR1|2825|G protein-coupled receptor 1##BC067833|GPR1|2825|G protein-coupled receptor 1##AK290976|GPR1|2825|G protein-coupled receptor 1##NM_001098199|GPR1|2825|G protein-coupled receptor 1##NM_005279|GPR1|2825|G protein-coupled receptor 1##AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##D28350|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##AB009672|ADAM23|8745|ADAM metallopeptidase domain 23##NM_003812|ADAM23|8745|ADAM metallopeptidase domain 23##BC132763|ADAM23|8745|ADAM metallopeptidase domain 23##BC132765|ADAM23|8745|ADAM metallopeptidase domain 23##AK129906|ADAM23|8745|ADAM metallopeptidase domain 23##NM_001102659|LOC200726|200726|hCG1657980	0.0	
chr3	143692196	143692308	reg1013295.p2	4.234	+	NM_001134470 AK294020	-35	+	TSC_hg19_v1_chr3_+_143690915 BC037293	-1262	+	NM_173552 AK315082	-1600	+	AB527423 U84573 AK295084 TSC_hg19_v1_chr3_-_145878818	2186555	-	TSC_hg19_v1_chr3_-_145878972 BC037169 AB209879	2186704	-	TSC_hg19_v1_chr3_-_145879223 NM_000935 NM_182943	2186999	-	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58##AK294020|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##U84573|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AK295084|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##BC037169|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AB209879|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_000935|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_182943|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2	0.0	
chr3	197121655	197121750	reg1023953.p2	4.234	+	BC140841 BC144651 TSC_hg19_v1_chr3_-_197025506 AK304280 NM_001098424 NM_001204386 NM_004087 U13896 U13897 AK310596	-96228	-	TSC_hg19_v1_chr3_-_197024987 BC015560 BC028486 AK310893	-96769	-	AK294855 NM_001204387 NM_001204388	-210701	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	161140	-	NM_203315 TSC_hg19_v1_chr3_-_197300209	178499	-	TSC_hg19_v1_chr3_-_197354756 BC067856 AK309924 BC094848 AK299863 BC080518 AK311713	233051	-	BC140841|DLG1|1739|discs, large homolog 1 (Drosophila)##BC144651|DLG1|1739|discs, large homolog 1 (Drosophila)##AK304280|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001098424|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204386|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_004087|DLG1|1739|discs, large homolog 1 (Drosophila)##U13896|DLG1|1739|discs, large homolog 1 (Drosophila)##U13897|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310596|DLG1|1739|discs, large homolog 1 (Drosophila)##BC015560|DLG1|1739|discs, large homolog 1 (Drosophila)##BC028486|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310893|DLG1|1739|discs, large homolog 1 (Drosophila)##AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203315|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC067856|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK309924|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC094848|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK299863|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC080518|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK311713|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene	0.0	
chr5	103682953	103683070	reg1038958.p1	4.234	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-784530	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-1088554	+	BC024591 NM_015216 AB463068	-1217737	+	AK308672 NM_001962 U26403	3323579	-	TSC_hg19_v1_chr5_-_107717106 AK126722	4034119	-	BC063316 NM_001163315	4034787	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.048225	
chr6	16471475	16471599	reg1029341.p1	4.234	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-232686	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-328227	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-342100	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	290160	-	NM_001190766	630951	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	810317	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.0	
chr8	96149959	96150117	reg1035037.p1	4.234	+	TSC_hg19_v1_chr8_+_96146116 AK023249	-3902	+	TSC_hg19_v1_chr8_+_96146012 AL834473 BC011806	-4030	+	TSC_hg19_v1_chr8_+_96145948 NM_024613	-4093	+	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	131013	+	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	131427	-	BC127948 BC127947 AJ537424 NM_001001557	1022943	-	AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##AL834473|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC011806|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6	0.0	
chr10	103824836	103824950	reg1029153.p1	4.233	+	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	-8981	-	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	-221286	-	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	-225281	-	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	249	+	AK300588 TSC_hg19_v1_chr10_-_103874641	49726	-	TSC_hg19_v1_chr10_-_103874760 BC000482 BC009246 NM_003893	49835	-	BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6##AK300588|LDB1|8861|LIM domain binding 1##BC000482|LDB1|8861|LIM domain binding 1##BC009246|LDB1|8861|LIM domain binding 1##NM_003893|LDB1|8861|LIM domain binding 1	0.0	
chr10	114899619	114899715	reg1035267.p2	4.233	+	TSC_hg19_v1_chr10_+_114710785 FJ010164 FJ010165 FJ010173	-188834	+	TSC_hg19_v1_chr10_+_114710005 AK225809 NM_001146274 NM_001146283 NM_001146284 NM_001146285 NM_001146286 NM_001198525 NM_001198526 NM_001198527 NM_001198528 NM_001198529 NM_001198530 NM_001198531 NM_030756 FJ010174 Y11306 AK315243 FJ010168 FJ010169 FJ010172 FJ010166 FJ010167 FJ010170 BC032656 FJ010171 AK299295 AB440195 AB451266 CR536574 HM352838 HM352839 HM352840 HM352841 HM352842 HM352843 HM352844 HM352845 HM352846 HM352847 HM352848 HM352849 HM352850 HM352851 BX648364	-189365	+	TSC_hg19_v1_chr10_-_114207307 AK308026	-692362	-	AK303948 NM_001177660	410922	+	NM_004132 D49742 S83182 BC031412 AK290832 AK303761 AK303759 AB590433 CU689160 DQ890820 DQ893975	413161	+	AM392642 AM393530 BC126407 BC143751 AL831980 AL832025 AL832330 BX640682 AY177620 AY177621 BX641052 BC005933 BC017866 BC058825 BC070130 AK056969 AY081943 NM_006175 NM_198060	524055	-	FJ010164|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010165|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010173|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK308026|ZDHHC6|64429|zinc finger, DHHC-type containing 6##AK303948|HABP2|3026|hyaluronan binding protein 2##NM_001177660|HABP2|3026|hyaluronan binding protein 2##NM_004132|HABP2|3026|hyaluronan binding protein 2##D49742|HABP2|3026|hyaluronan binding protein 2##S83182|HABP2|3026|hyaluronan binding protein 2##BC031412|HABP2|3026|hyaluronan binding protein 2##AK290832|HABP2|3026|hyaluronan binding protein 2##AK303761|HABP2|3026|hyaluronan binding protein 2##AK303759|HABP2|3026|hyaluronan binding protein 2##DQ890820|HABP2|3026|hyaluronan binding protein 2##DQ893975|HABP2|3026|hyaluronan binding protein 2##AM392642|NRAP|4892|nebulin-related anchoring protein##AM393530|NRAP|4892|nebulin-related anchoring protein##BC126407|NRAP|4892|nebulin-related anchoring protein##BC143751|NRAP|4892|nebulin-related anchoring protein##AL831980|NRAP|4892|nebulin-related anchoring protein##AL832025|NRAP|4892|nebulin-related anchoring protein##AL832330|NRAP|4892|nebulin-related anchoring protein##BX640682|NRAP|4892|nebulin-related anchoring protein##AY177620|NRAP|4892|nebulin-related anchoring protein##AY177621|NRAP|4892|nebulin-related anchoring protein##BX641052|NRAP|4892|nebulin-related anchoring protein##BC005933|NRAP|4892|nebulin-related anchoring protein##BC017866|NRAP|4892|nebulin-related anchoring protein##BC058825|NRAP|4892|nebulin-related anchoring protein##BC070130|NRAP|4892|nebulin-related anchoring protein##AK056969|NRAP|4892|nebulin-related anchoring protein##AY081943|NRAP|4892|nebulin-related anchoring protein##NM_006175|NRAP|4892|nebulin-related anchoring protein##NM_198060|NRAP|4892|nebulin-related anchoring protein	0.02539	
chr11	85780637	85780776	reg1027780.p2	4.233	+	TSC_hg19_v1_chr11_-_85780127 AB210017 NM_001008660 NM_001206946 NM_007166 AK291414	-582	-	TSC_hg19_v1_chr11_-_85780088 BC064357	-611	-	AB451308 BC048259 U45976 BC073961 TSC_hg19_v1_chr11_-_85779975	-808	-	AK300275 NM_001206947	204	-	TSC_hg19_v1_chr11_+_85955830 NM_003797 NM_152991 AK292120 AF080227	175153	+	AF070418 TSC_hg19_v1_chr11_+_85956058	175343	+	AB210017|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001008660|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206946|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_007166|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AK291414|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC064357|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AB451308|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC048259|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##U45976|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC073961|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_003797|EED|8726|embryonic ectoderm development##NM_152991|EED|8726|embryonic ectoderm development##AK292120|EED|8726|embryonic ectoderm development##AF080227|EED|8726|embryonic ectoderm development##AF070418|EED|8726|embryonic ectoderm development	0.0	
chr19	12274090	12274251	reg1026561.p2	4.233	+	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	-261	+	BC007868 AK096560 AK292455 NM_145233 TSC_hg19_v1_chr19_-_12267555	-6624	-	AL080125 AK023094 BC036714 TSC_hg19_v1_chr19_-_12251166 NM_001203250 NM_021143	-23014	-	AK023304 TSC_hg19_v1_chr19_+_12305836	31663	+	TSC_hg19_v1_chr19_+_12305871 AK093188 AX721123	31736	+	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	131482	-	NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136##BC007868|ZNF625|90589|zinc finger protein 625##AK096560|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##AK292455|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##NM_145233|ZNF625|90589|zinc finger protein 625##AL080125|ZNF20|7568|zinc finger protein 20##AK023094|ZNF20|7568|zinc finger protein 20##BC036714|ZNF20|7568|zinc finger protein 20##NM_001203250|ZNF20|7568|zinc finger protein 20##NM_021143|ZNF20|7568|zinc finger protein 20##AK023304|LOC100289333|100289333|uncharacterized LOC100289333##BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44	0.018641	
chr3	189676402	189676513	reg1032098.p2	4.233	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	-168939	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-327198	+	AK125682 NM_198485 BC101550 BC101552	-786646	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	162238	-	NM_018192	162450	-	NM_001134418	163768	-	AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##NM_001134418|LEPREL1|55214|leprecan-like 1	0.998622	CTCF.p2:11:0.999
chr5	138268279	138268408	reg1031364.p2	4.233	+	HQ589335 TSC_hg19_v1_chr5_+_138211097	-57252	+	TSC_hg19_v1_chr5_-_138211057 NM_015564	-57284	-	AK309790 TSC_hg19_v1_chr5_-_138211025 AB007876 BC028172 AK291064 AK297332	-57330	-	AF547994 TSC_hg19_v1_chr5_-_138533996 AK075177	265646	-	TSC_hg19_v1_chr5_-_138533998 AY358950 BC011568	265665	-	TSC_hg19_v1_chr5_-_138534058 AJ299442 AK074624 NM_001037633 NM_022464	265703	-	HQ589335|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AF547994|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK075177|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AY358950|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##BC011568|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AJ299442|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK074624|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_001037633|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_022464|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)	0.795982	CTCF.p2:-9:0.738
chr7	72538630	72538726	reg1027220.p2	4.233	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-113436	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-141804	+	TSC_hg19_v1_chr7_+_72395623 AK123814 AB289621	-143053	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	30353	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	184146	-	AK057366 AY081948 AY081949 NM_178125	203406	-	BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##AK123814|POM121|9883|POM121 membrane glycoprotein##AB289621|POM121|9883|POM121 membrane glycoprotein##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50	0.525986	CTCF.p2:-30:0.526
chr10	112255772	112255952	reg1033295.p1	4.232	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-191162	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-191269	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-270041	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	1889	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	71630	+	AF067163 TSC_hg19_v1_chr10_+_112344155	88253	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.0	
chr1	206957987	206958154	reg1019873.p2	4.232	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-12191	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-99599	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-148960	+	AY040367 NM_153758 AB463800	14156	+	AF453946 NM_013371	44151	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	81105	+	AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20	0.0	
chr12	131553709	131553806	reg1031638.p1	4.232	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-115304	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-197046	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-197132	+	TSC_hg19_v1_chr12_+_132195623 BC142980	641856	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	641899	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	759209	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.0	
chr13	52338673	52338821	reg1030308.p1	4.232	+	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-180012	+	TSC_hg19_v1_chr13_+_52158639 BC014004	-180106	+	AK309815 TSC_hg19_v1_chr13_+_52158630	-180114	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	39528	-	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	97447	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	246803	-	AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##BC014004|WDFY2|115825|WD repeat and FYVE domain containing 2##AK309815|WDFY2|115825|WD repeat and FYVE domain containing 2##BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide	0.0	
chr4	159588922	159589057	reg1034895.p1	4.232	+	NM_001253727 NM_001253728 NM_001253729 NM_001253730 NM_001253732 NM_001253733 NM_021634 BX647985 BX647975 BX647980 AK307889 AK300379 AK312470 TSC_hg19_v1_chr4_+_159443033 AK295040 BC113617 BC143557 BC143558 BC143559 BC112142 BC143556 AK294694 AB208943 AF190500 AY899848 AY899849 AY899850 HQ258496	-145993	+	BC036551 BC048117 BC054487 TSC_hg19_v1_chr4_+_159131677 BC060875 BC035811 BC026318	-457315	+	NM_018342	-457589	+	TSC_hg19_v1_chr4_-_159593035 AK027539 BC065017 BC094775 NM_001008393	4101	-	TSC_hg19_v1_chr4_+_159593447 AK314803 NM_004453 BC011890 AK311435 BX538129 AK304838 S69232 EU093082 EU093083	4405	+	AB528445 CR542081 DQ891562 DQ894749 TSC_hg19_v1_chr4_-_159644545 BC014893 L11667 BC030707 AK313929 NM_005038	55539	-	NM_001253727|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253728|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253729|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253730|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253732|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_001253733|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##NM_021634|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647985|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647975|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BX647980|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK307889|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK300379|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK312470|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK295040|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC113617|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143557|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143558|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143559|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC112142|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC143556|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AK294694|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AB208943|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AF190500|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899848|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899849|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##AY899850|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##HQ258496|RXFP1|59350|relaxin/insulin-like family peptide receptor 1##BC036551|TMEM144|55314|transmembrane protein 144##BC048117|TMEM144|55314|transmembrane protein 144##BC054487|TMEM144|55314|transmembrane protein 144##BC060875|TMEM144|55314|transmembrane protein 144##BC035811|TMEM144|55314|transmembrane protein 144##BC026318|TMEM144|55314|transmembrane protein 144##NM_018342|TMEM144|55314|transmembrane protein 144##AK027539|C4orf46|201725|chromosome 4 open reading frame 46##BC065017|C4orf46|201725|chromosome 4 open reading frame 46##BC094775|C4orf46|201725|chromosome 4 open reading frame 46##NM_001008393|C4orf46|201725|chromosome 4 open reading frame 46##AK314803|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##NM_004453|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BC011890|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##BX538129|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##AK304838|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##S69232|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093082|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##EU093083|ETFDH|2110|electron-transferring-flavoprotein dehydrogenase##CR542081|PPID|5481|peptidylprolyl isomerase D##DQ891562|PPID|5481|peptidylprolyl isomerase D##DQ894749|PPID|5481|peptidylprolyl isomerase D##BC014893|PPID|5481|peptidylprolyl isomerase D##L11667|PPID|5481|peptidylprolyl isomerase D##BC030707|PPID|5481|peptidylprolyl isomerase D##AK313929|PPID|5481|peptidylprolyl isomerase D##NM_005038|PPID|5481|peptidylprolyl isomerase D	0.0	
chr5	33300212	33300321	reg1034182.p1	4.232	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	-588461	+	AK290870 NM_000908 NM_001204375 M59305	-588778	+	NM_001204376 AK300094 AK308301	-589516	+	AK292346 TSC_hg19_v1_chr5_+_33440874 NM_152295	140590	+	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	140873	+	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	591779	-	BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK292346|TARS|6897|threonyl-tRNA synthetase##NM_152295|TARS|6897|threonyl-tRNA synthetase##AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12	0.165745	
chr9	127618326	127618418	reg1031400.p1	4.232	+	BC150645 BC171828 BC171830 BC171837 BC127949 TSC_hg19_v1_chr9_+_127615749 NM_001045476	-2648	+	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	-78872	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	-84862	-	TSC_hg19_v1_chr9_-_127624226 BC071915 U12465 BC000348 AK291072 BC010919 D28448 NM_007209	5845	-	TSC_hg19_v1_chr9_+_127624397 AK056174	6022	+	TSC_hg19_v1_chr9_+_127631421 AK315604	13058	+	BC150645|WDR38|401551|WD repeat domain 38##BC171828|WDR38|401551|WD repeat domain 38##BC171830|WDR38|401551|WD repeat domain 38##BC171837|WDR38|401551|WD repeat domain 38##BC127949|WDR38|401551|WD repeat domain 38##NM_001045476|WDR38|401551|WD repeat domain 38##AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A##HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC071915|RPL35|11224|ribosomal protein L35##U12465|RPL35|11224|ribosomal protein L35##BC000348|RPL35|11224|ribosomal protein L35##AK291072|RPL35|11224|ribosomal protein L35##BC010919|RPL35|11224|ribosomal protein L35##D28448|RPL35|11224|ribosomal protein L35##NM_007209|RPL35|11224|ribosomal protein L35##AK056174|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like##AK315604|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like	0.870972	CTCF.p2:5:0.871
chr16	69893647	69893741	reg1033968.p1	4.231	+	TSC_hg19_v1_chr16_+_69796265 BC064531 AJ001982 NM_007014 NM_199423 U96114	-97438	+	TSC_hg19_v1_chr16_+_69796208 AK312792	-97506	+	AF190161 TSC_hg19_v1_chr16_-_69788828 BC064630 CU687926 AK314307 AK001028 AB026125 NM_014062 AY487344	-104871	-	AK126332 NM_199424 TSC_hg19_v1_chr16_+_69958904	65208	+	BC078143 NM_001136214	90931	+	AF521893 NM_182619 BC141808 AF428259 AF448856 AL833339 AK289884 AK298310 AK074773 EU831776 EU831854 CU687316 AK096051	91398	+	BC064531|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AJ001982|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_007014|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_199423|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##U96114|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AK312792|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##AF190161|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##BC064630|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AK314307|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AK001028|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AB026125|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##NM_014062|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AY487344|NOB1|28987|NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)##AK126332|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##NM_199424|WWP2|11060|WW domain containing E3 ubiquitin protein ligase 2##BC078143|CLEC18A|348174|C-type lectin domain family 18, member A##NM_001136214|CLEC18A|348174|C-type lectin domain family 18, member A##AF521893|CLEC18A|348174|C-type lectin domain family 18, member A##NM_182619|CLEC18A|348174|C-type lectin domain family 18, member A##BC141808|CLEC18A|348174|C-type lectin domain family 18, member A##AF428259|CLEC18A|348174|C-type lectin domain family 18, member A##AF448856|CLEC18C|283971|C-type lectin domain family 18, member C##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AK289884|CLEC18A|348174|C-type lectin domain family 18, member A##AK298310|CLEC18A|348174|C-type lectin domain family 18, member A##AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##EU831776|CLEC18A|348174|C-type lectin domain family 18, member A##EU831854|CLEC18A|348174|C-type lectin domain family 18, member A##AK096051|CLEC18A|348174|C-type lectin domain family 18, member A	0.997408	CTCF.p2:8:0.997
chr17	34336529	34336637	reg1031116.p1	4.231	+	NM_032965 TSC_hg19_v1_chr17_-_34329160	-7461	-	TSC_hg19_v1_chr17_-_34328607 BC140941	-7950	-	AB463484 AF031587 Z70292 Z70293 TSC_hg19_v1_chr17_-_34328592 U58914	-8022	-	AB590848 U67128 U85767 BC093970 BC143310 NM_005064 NM_145898 U58913	8385	-	AB000221 NM_002988 Y13710 BC096124 BC096125 BC096126 BC096127 BC069700 AB590849 AB451458 CR407660	55087	+	D63785 AB463487 BC171831 BC171891 BC071834 M25315 D00044 M23452 X03754 NM_002983	80862	-	NM_032965|CCL15|6359|chemokine (C-C motif) ligand 15##BC140941|CCL14-CCL15|348249|CCL14-CCL15 readthrough##AF031587|CCL15|6359|chemokine (C-C motif) ligand 15##Z70292|CCL14-CCL15|348249|CCL14-CCL15 readthrough##Z70293|CCL14-CCL15|348249|CCL14-CCL15 readthrough##U58914|CCL15|6359|chemokine (C-C motif) ligand 15##U67128|CCL23|6368|chemokine (C-C motif) ligand 23##U85767|CCL23|6368|chemokine (C-C motif) ligand 23##BC093970|CCL23|6368|chemokine (C-C motif) ligand 23##BC143310|CCL23|6368|chemokine (C-C motif) ligand 23##NM_005064|CCL23|6368|chemokine (C-C motif) ligand 23##NM_145898|CCL23|6368|chemokine (C-C motif) ligand 23##U58913|CCL23|6368|chemokine (C-C motif) ligand 23##AB000221|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##NM_002988|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##Y13710|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096124|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096125|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096126|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC096127|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##BC069700|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##AB451458|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##CR407660|CCL18|6362|chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)##D63785|CCL3|6348|chemokine (C-C motif) ligand 3##BC171831|CCL3|6348|chemokine (C-C motif) ligand 3##BC171891|CCL3|6348|chemokine (C-C motif) ligand 3##BC071834|CCL3|6348|chemokine (C-C motif) ligand 3##M25315|CCL3|6348|chemokine (C-C motif) ligand 3##D00044|CCL3|6348|chemokine (C-C motif) ligand 3##M23452|CCL3|6348|chemokine (C-C motif) ligand 3##X03754|CCL3|6348|chemokine (C-C motif) ligand 3##NM_002983|CCL3|6348|chemokine (C-C motif) ligand 3	0.990851	CTCF.p2:-29:0.991
chr2	99797589	99797693	reg1033234.p1	4.231	+	TSC_hg19_v1_chr2_+_99797614 NM_145212 BC022391 AK025547	-61	+	AL161992 TSC_hg19_v1_chr2_-_99797496 BC018453 NM_138798 AK311658	-180	-	TSC_hg19_v1_chr2_+_99771541 NM_001204830	-26096	+	TSC_hg19_v1_chr2_+_99797646 AK225894 BC000217	19	+	NM_175735	73928	-	BC029126 NM_174898	119997	-	NM_145212|MRPL30|51263|mitochondrial ribosomal protein L30##BC022391|MRPL30|51263|mitochondrial ribosomal protein L30##AK025547|MRPL30|51263|mitochondrial ribosomal protein L30##AL161992|MITD1|129531|MIT, microtubule interacting and transport, domain containing 1##BC018453|MITD1|129531|MIT, microtubule interacting and transport, domain containing 1##NM_138798|MITD1|129531|MIT, microtubule interacting and transport, domain containing 1##NM_001204830|LIPT1|51601|lipoyltransferase 1##AK225894|MRPL30|51263|mitochondrial ribosomal protein L30##BC000217|MRPL30|51263|mitochondrial ribosomal protein L30##NM_175735|LYG2|254773|lysozyme G-like 2##BC029126|LYG1|129530|lysozyme G-like 1##NM_174898|LYG1|129530|lysozyme G-like 1	0.0	
chr8	106918788	106918889	reg1030662.p2	4.231	+	AF119334 BC109222 BC109223 NM_012082	-587692	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-1317591	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-1317663	-	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	363585	+	AK296561 NM_001198532	541313	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	751150	+	AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1	0.997445	CTCF.p2:-7:0.997
chrX	136520406	136520523	reg1035756.p2	4.231	+	BC069439 NM_054021 CU686814	-406629	-	TSC_hg19_v1_chrX_+_135991587 AK055694	-528908	+	TSC_hg19_v1_chrX_-_135962939 NM_001164803 NM_002139	-557529	-	TSC_hg19_v1_chrX_+_136648313 AF028706 NM_003413	127865	+	EU532020 TSC_hg19_v1_chrX_+_136648691 BC113393 BC113395 AB464363 HQ258447	128303	+	AF100143 TSC_hg19_v1_chrX_-_137793504 AK289960 BC034340	1272990	-	BC069439|GPR101|83550|G protein-coupled receptor 101##NM_054021|GPR101|83550|G protein-coupled receptor 101##NM_001164803|RBMX|27316|RNA binding motif protein, X-linked##NM_002139|RBMX|27316|RNA binding motif protein, X-linked##AF028706|ZIC3|7547|Zic family member 3##NM_003413|ZIC3|7547|Zic family member 3##EU532020|ZIC3|7547|Zic family member 3##BC113393|ZIC3|7547|Zic family member 3##BC113395|ZIC3|7547|Zic family member 3##HQ258447|ZIC3|7547|Zic family member 3##AF100143|FGF13|2258|fibroblast growth factor 13##AK289960|FGF13|2258|fibroblast growth factor 13##BC034340|FGF13|2258|fibroblast growth factor 13	0.036798	
chr10	1038525	1038699	reg1027481.p1	4.230	+	TSC_hg19_v1_chr10_+_1034373 BC008683 BC021243 AF120334 BC038975 AK001548 AK097093 AK222861 AK295231 AF325353 BC033784 AK302219	-4214	+	TSC_hg19_v1_chr10_+_1034348 AK001552 NM_012341	-4271	+	AK130873 TSC_hg19_v1_chr10_-_1034282	-4313	-	BC017778 AK056950 NM_033261	33185	-	TSC_hg19_v1_chr10_-_1094827 X17025 AK222875 BC107893	56221	-	AK311110 TSC_hg19_v1_chr10_-_1094867	56258	-	BC008683|GTPBP4|23560|GTP binding protein 4##BC021243|GTPBP4|23560|GTP binding protein 4##AF120334|GTPBP4|23560|GTP binding protein 4##BC038975|GTPBP4|23560|GTP binding protein 4##AK001548|GTPBP4|23560|GTP binding protein 4##AK097093|GTPBP4|23560|GTP binding protein 4##AK222861|GTPBP4|23560|GTP binding protein 4##AK295231|GTPBP4|23560|GTP binding protein 4##AF325353|GTPBP4|23560|GTP binding protein 4##BC033784|GTPBP4|23560|GTP binding protein 4##AK302219|GTPBP4|23560|GTP binding protein 4##AK001552|GTPBP4|23560|GTP binding protein 4##NM_012341|GTPBP4|23560|GTP binding protein 4##AK130873|LOC100288619|100288619|uncharacterized LOC100288619##BC017778|IDI2|91734|isopentenyl-diphosphate delta isomerase 2##AK056950|IDI2|91734|isopentenyl-diphosphate delta isomerase 2##NM_033261|IDI2|91734|isopentenyl-diphosphate delta isomerase 2##X17025|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AK222875|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##BC107893|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AK311110|IDI1|3422|isopentenyl-diphosphate delta isomerase 1	0.0	
chr12	57521106	57521284	reg1032077.p2	4.230	+	TSC_hg19_v1_chr12_-_57505177 NM_001178078 NM_001178080 NM_001178081 NM_003153	-15998	-	TSC_hg19_v1_chr12_-_57505144 AK290431 AK299094 AK316142 BC004973 BC005823	-16050	-	TSC_hg19_v1_chr12_-_57505013 AK316236 BC075852 AK298721 AK312471 U16031	-16190	-	TSC_hg19_v1_chr12_+_57522265 BC052593 BC072015 NM_002332 X13916	1087	+	TSC_hg19_v1_chr12_+_57522452 BC045107	1268	+	AY358614 NM_007224 TSC_hg19_v1_chr12_+_57610601 BC036679 AK094231 AK290949 BC053581 CU690992	89469	+	NM_001178078|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178080|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178081|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_003153|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK290431|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK299094|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK316142|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC004973|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC005823|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK316236|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC075852|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK298721|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK312471|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##U16031|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC052593|LRP1|4035|low density lipoprotein receptor-related protein 1##BC072015|LRP1|4035|low density lipoprotein receptor-related protein 1##NM_002332|LRP1|4035|low density lipoprotein receptor-related protein 1##X13916|LRP1|4035|low density lipoprotein receptor-related protein 1##BC045107|LRP1|4035|low density lipoprotein receptor-related protein 1##AY358614|NXPH4|11247|neurexophilin 4##NM_007224|NXPH4|11247|neurexophilin 4##BC036679|NXPH4|11247|neurexophilin 4##AK094231|NXPH4|11247|neurexophilin 4##AK290949|NXPH4|11247|neurexophilin 4##BC053581|NXPH4|11247|neurexophilin 4	0.994282	CTCF.p2:-31:0.994
chr13	77919663	77919831	reg1033610.p2	4.230	+	NM_015057 TSC_hg19_v1_chr13_-_77901230	-18544	-	TSC_hg19_v1_chr13_-_77601303 AK314442 NM_012158	-318416	-	TSC_hg19_v1_chr13_-_77601295 AL833187 BC063796 BC072448	-318465	-	NM_001160706 NM_003843 NM_144777 BC020726 AF045941 AK025320 AK222720 AK301659	190104	+	TSC_hg19_v1_chr13_+_78271822 NM_001242868	352157	+	AK294201 NM_001040153	353268	+	NM_015057|MYCBP2|23077|MYC binding protein 2##AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3##AL833187|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC063796|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC072448|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_001160706|SCEL|8796|sciellin##NM_003843|SCEL|8796|sciellin##NM_144777|SCEL|8796|sciellin##BC020726|SCEL|8796|sciellin##AF045941|SCEL|8796|sciellin##AK025320|SCEL|8796|sciellin##AK222720|SCEL|8796|sciellin##AK301659|SCEL|8796|sciellin##NM_001242868|SLAIN1|122060|SLAIN motif family, member 1##AK294201|SLAIN1|122060|SLAIN motif family, member 1##NM_001040153|SLAIN1|122060|SLAIN motif family, member 1	0.0	
chr16	10975186	10975326	reg1034342.p1	4.230	+	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	-4144	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	-62708	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-137552	+	BC071683 TSC_hg19_v1_chr16_-_11036171	60910	-	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	60979	-	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	63187	+	AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##BC071683|DEXI|28955|Dexi homolog (mouse)##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A	0.0	
chr16	47070249	47070351	reg1033097.p1	4.230	+	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	-62705	-	CU677459 AF011793 AJ001309 TSC_hg19_v1_chr16_-_47007561	-62778	-	TSC_hg19_v1_chr16_-_47005340 Y13350	-64952	-	AY358718 BC108727 TSC_hg19_v1_chr16_-_47177852 BC098380	107546	-	TSC_hg19_v1_chr16_-_47177902 AK074937 NM_001201477 NM_018092	107622	-	TSC_hg19_v1_chr16_-_47494975 BC006321 DQ893514 DQ896493 AF503339 AK027596	424565	-	AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AJ001309|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AY358718|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC108727|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC098380|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##AK074937|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_001201477|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_018092|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC006321|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ893514|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ896493|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF503339|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK027596|ITFG1|81533|integrin alpha FG-GAP repeat containing 1	0.015933	
chr17	78226838	78226949	reg1028719.p2	4.230	+	TSC_hg19_v1_chr17_+_78194101 NM_001166347 NM_001166348 NM_001166349 NM_173626 AJ544073 AK027293 AK075248 AK315132 AL833468 BC035900 AF345195	-32715	+	TSC_hg19_v1_chr17_-_78194133 CU690396 U30894 AB209900 BC047318 AK222890 AK291257 AK304706 AK309927 AK095969 NM_000199	-32752	-	BC001326 NM_052819	-65295	+	TSC_hg19_v1_chr17_+_78234657 AB537889 BC036891 NM_020914 NM_020954 AL832920 BC040341 AF397204 AF397205	7792	+	TSC_hg19_v1_chr17_+_78237445 CU691854	10541	+	TSC_hg19_v1_chr17_+_78356710 AK023871	129877	+	NM_001166347|SLC26A11|284129|solute carrier family 26, member 11##NM_001166348|SLC26A11|284129|solute carrier family 26, member 11##NM_001166349|SLC26A11|284129|solute carrier family 26, member 11##NM_173626|SLC26A11|284129|solute carrier family 26, member 11##AJ544073|SLC26A11|284129|solute carrier family 26, member 11##AK027293|SLC26A11|284129|solute carrier family 26, member 11##AK075248|SLC26A11|284129|solute carrier family 26, member 11##AK315132|SLC26A11|284129|solute carrier family 26, member 11##AL833468|SLC26A11|284129|solute carrier family 26, member 11##BC035900|SLC26A11|284129|solute carrier family 26, member 11##AF345195|SLC26A11|284129|solute carrier family 26, member 11##U30894|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AB209900|SGSH|6448|N-sulfoglucosamine sulfohydrolase##BC047318|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK222890|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK291257|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK304706|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK309927|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK095969|SGSH|6448|N-sulfoglucosamine sulfohydrolase##NM_000199|SGSH|6448|N-sulfoglucosamine sulfohydrolase##BC001326|CARD14|79092|caspase recruitment domain family, member 14##NM_052819|CARD14|79092|caspase recruitment domain family, member 14##AB537889|RNF213|57674|ring finger protein 213##BC036891|RNF213|57674|ring finger protein 213##NM_020914|RNF213|57674|ring finger protein 213##NM_020954|RNF213|57674|ring finger protein 213##AL832920|RNF213|57674|ring finger protein 213##BC040341|RNF213|57674|ring finger protein 213##AF397204|RNF213|57674|ring finger protein 213##AF397205|RNF213|57674|ring finger protein 213##AK023871|RNF213|57674|ring finger protein 213	0.632741	CTCF.p2:-6:0.633
chr3	150127719	150127856	reg1018507.p1	4.230	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	-1024	+	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	-1715	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-438707	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	136183	-	AB022427 TSC_hg19_v1_chr3_-_150264228	136394	-	BC112364 BC112365 TSC_hg19_v1_chr3_-_150264234 AL136807	136461	-	BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC012363|LOC646903|646903|uncharacterized LOC646903##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AB022427|SERP1|27230|stress-associated endoplasmic reticulum protein 1##BC112364|SERP1|27230|stress-associated endoplasmic reticulum protein 1##BC112365|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AL136807|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.0	
chr3	48192928	48193109	reg1008344.p1	4.230	+	TSC_hg19_v1_chr3_-_48130743 AK054577 NM_001134364 NM_002375 NM_030885	-62318	-	TSC_hg19_v1_chr3_-_48130339 BC019229 BC067228 BC051843 M64571 U19727 AB209377 AK307606 BC008715 BC012794 BC015149 AK297242	-62681	-	TSC_hg19_v1_chr3_-_48040260 CU679053 EU831606 EU831693	-152714	-	AF277722 AY137580 EU812118 CU675643 AB590275 DQ890753 DQ892919 DQ896168 AK290554 TSC_hg19_v1_chr3_-_48229511	36410	-	BC007401 BC018642 NM_001789 NM_201567 TSC_hg19_v1_chr3_-_48229900 M81933	36841	-	NM_004345 BC055089 X89658 U19970 CU691114 AB590666 AY251531 Z38026 AY162210 CR457083 CR541961	71900	+	AK054577|MAP4|4134|microtubule-associated protein 4##NM_001134364|MAP4|4134|microtubule-associated protein 4##NM_002375|MAP4|4134|microtubule-associated protein 4##NM_030885|MAP4|4134|microtubule-associated protein 4##BC019229|MAP4|4134|microtubule-associated protein 4##BC067228|MAP4|4134|microtubule-associated protein 4##BC051843|MAP4|4134|microtubule-associated protein 4##M64571|MAP4|4134|microtubule-associated protein 4##U19727|MAP4|4134|microtubule-associated protein 4##AB209377|MAP4|4134|microtubule-associated protein 4##AK307606|MAP4|4134|microtubule-associated protein 4##BC008715|MAP4|4134|microtubule-associated protein 4##BC012794|MAP4|4134|microtubule-associated protein 4##BC015149|MAP4|4134|microtubule-associated protein 4##AK297242|MAP4|4134|microtubule-associated protein 4##EU831606|MAP4|4134|microtubule-associated protein 4##EU831693|MAP4|4134|microtubule-associated protein 4##AF277722|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AY137580|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##EU812118|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ890753|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ892919|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##DQ896168|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##AK290554|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##BC007401|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##BC018642|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_001789|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_201567|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##M81933|CDC25A|993|cell division cycle 25 homolog A (S. pombe)##NM_004345|CAMP|820|cathelicidin antimicrobial peptide##BC055089|CAMP|820|cathelicidin antimicrobial peptide##X89658|CAMP|820|cathelicidin antimicrobial peptide##U19970|CAMP|820|cathelicidin antimicrobial peptide##AY251531|CAMP|820|cathelicidin antimicrobial peptide##Z38026|CAMP|820|cathelicidin antimicrobial peptide##AY162210|CAMP|820|cathelicidin antimicrobial peptide##CR457083|CAMP|820|cathelicidin antimicrobial peptide##CR541961|CAMP|820|cathelicidin antimicrobial peptide	0.0	
chr5	137800107	137800287	reg1015299.p2	4.230	+	AY562240 TSC_hg19_v1_chr5_+_137774899 AF251041	-25291	+	TSC_hg19_v1_chr5_+_137774760 AK056193 AK291101 AK223611 BC006218 NM_016606 AK293480 AK290547	-25469	+	TSC_hg19_v1_chr5_+_137688386 BC146788 AB029005 AB527166	-111762	+	TSC_hg19_v1_chr5_+_137801167 AK298101 AK301065	974	+	TSC_hg19_v1_chr5_+_137801192 NM_001964 X52541 BC073983 M62829 M80583 BC041701 CU687282 AB591041 EU832310 EU832395	1117	+	TSC_hg19_v1_chr5_-_137848536 X80916	48356	-	AY562240|REEP2|51308|receptor accessory protein 2##AF251041|REEP2|51308|receptor accessory protein 2##AK056193|REEP2|51308|receptor accessory protein 2##AK291101|REEP2|51308|receptor accessory protein 2##AK223611|REEP2|51308|receptor accessory protein 2##BC006218|REEP2|51308|receptor accessory protein 2##NM_016606|REEP2|51308|receptor accessory protein 2##AK293480|REEP2|51308|receptor accessory protein 2##AK290547|REEP2|51308|receptor accessory protein 2##BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B##AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B##AK298101|EGR1|1958|early growth response 1##AK301065|EGR1|1958|early growth response 1##NM_001964|EGR1|1958|early growth response 1##X52541|EGR1|1958|early growth response 1##BC073983|EGR1|1958|early growth response 1##M62829|EGR1|1958|early growth response 1##M80583|EGR1|1958|early growth response 1##BC041701|EGR1|1958|early growth response 1##EU832310|EGR1|1958|early growth response 1##EU832395|EGR1|1958|early growth response 1##X80916|ETF1|2107|eukaryotic translation termination factor 1	0.255931	CTCF.p2:92:0.256
chr6	79545639	79545767	reg1042193.p1	4.230	+	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	-1372554	-	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	-2763404	-	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-3086694	+	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	31552	+	BC064611 TSC_hg19_v1_chr6_-_79675737 AK000712	130049	-	TSC_hg19_v1_chr6_+_79787573 BC036479	241857	+	BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC064611|PHIP|55023|pleckstrin homology domain interacting protein##AK000712|PHIP|55023|pleckstrin homology domain interacting protein##BC036479|PHIP|55023|pleckstrin homology domain interacting protein	0.029879	
chr10	47377624	47377748	reg1035401.p2	4.229	+	BC171820 BC171845 BC171847 NM_001190810	-164061	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	-196002	-	AB590156 CU687256 DQ893430 DQ896775 M81844 AK296573 AK300139 AK300158 BC021910 BC004376 NM_001098845 AK296976 Z36830 BC073755 NM_001040084 AK298761	-203667	-	NM_001630 BC008813 BC073755 AK096715 AK313626 X16662 BC029890 AK300191 AK223149 AK307182 CU679125 CU687256	369329	+	NM_018232	516336	+	BC171820 BC171845 BC171847 NM_001190810	838037	+	BC171845|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171847|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##NM_001190810|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##DQ893430|ANXA8L2|244|annexin A8-like 2##DQ896775|ANXA8|653145|annexin A8##M81844|ANXA8|653145|annexin A8##AK296573|ANXA8|653145|annexin A8##AK300139|ANXA8|653145|annexin A8##AK300158|ANXA8|653145|annexin A8##BC004376|ANXA8|653145|annexin A8##NM_001098845|ANXA8L1|728113|annexin A8-like 1##Z36830|ANXA8|653145|annexin A8##BC073755|ANXA8|653145|annexin A8##NM_001040084|ANXA8|653145|annexin A8##AK298761|ANXA8|653145|annexin A8##NM_001630|ANXA8L2|244|annexin A8-like 2##BC008813|ANXA8L2|244|annexin A8-like 2##BC073755|ANXA8|653145|annexin A8##AK313626|ANXA8L2|244|annexin A8-like 2##X16662|ANXA8L2|244|annexin A8-like 2##AK300191|ANXA8L2|244|annexin A8-like 2##AK223149|ANXA8L2|244|annexin A8-like 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##BC171845|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##BC171847|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9##NM_001190810|AGAP9|642517|ArfGAP with GTPase domain, ankyrin repeat and PH domain 9	0.043077	
chr12	105713741	105713852	reg1035384.p1	4.229	+	CU689714 AB527678 DQ892107 DQ895301 TSC_hg19_v1_chr12_-_105629989 AK001521 AK290562 AK297100 BC033731 BC028008 AY113704 NM_001251904 NM_018171	-83886	-	NM_001251905	-86614	-	TSC_hg19_v1_chr12_+_105501556 AB385420	-212229	+	TSC_hg19_v1_chr12_+_105724468 BC013920 NM_001145199 BC067897 BC045812 BC061920 AK056999 AJ311377	10675	+	AJ311378 TSC_hg19_v1_chr12_+_105724640	10843	+	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	818886	-	DQ892107|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##DQ895301|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK001521|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK290562|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK297100|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC033731|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC028008|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AY113704|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251904|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_018171|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251905|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC013920|C12orf75|387882|chromosome 12 open reading frame 75##NM_001145199|C12orf75|387882|chromosome 12 open reading frame 75##BC067897|C12orf75|387882|chromosome 12 open reading frame 75##BC045812|C12orf75|387882|chromosome 12 open reading frame 75##BC061920|C12orf75|387882|chromosome 12 open reading frame 75##AK056999|C12orf75|387882|chromosome 12 open reading frame 75##AJ311377|C12orf75|387882|chromosome 12 open reading frame 75##AJ311378|C12orf75|387882|chromosome 12 open reading frame 75##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1	0.263564	CTCF.p2:-4:0.264
chr1	33358566	33358671	reg1026086.p1	4.229	+	TSC_hg19_v1_chr1_+_33352097 DQ426877 AK313907 BC001777 NM_002143	-6534	+	BC062297 NM_001171941	-20537	-	BX537781 AK092102 AX747354 NM_001171940 NM_153756 TSC_hg19_v1_chr1_-_33336539	-22198	-	AY359883 TSC_hg19_v1_chr1_-_33366959 AY027543 BC020497 BC001418 BC013953 NM_033504 BC023260	8316	-	NM_001127361 NM_153341 TSC_hg19_v1_chr1_-_33430415 AK131439	71778	-	AB451267 AB451394 AY080900 U54645 BC009405 AK307731 TSC_hg19_v1_chr1_-_33502450 AK295105 AK296863 BC026705 AK291676 AK297036	143821	-	DQ426877|HPCA|3208|hippocalcin##AK313907|HPCA|3208|hippocalcin##BC001777|HPCA|3208|hippocalcin##NM_002143|HPCA|3208|hippocalcin##BC062297|FNDC5|252995|fibronectin type III domain containing 5##NM_001171941|FNDC5|252995|fibronectin type III domain containing 5##BX537781|FNDC5|252995|fibronectin type III domain containing 5##AK092102|FNDC5|252995|fibronectin type III domain containing 5##NM_001171940|FNDC5|252995|fibronectin type III domain containing 5##NM_153756|FNDC5|252995|fibronectin type III domain containing 5##AY359883|TMEM54|113452|transmembrane protein 54##AY027543|TMEM54|113452|transmembrane protein 54##BC020497|TMEM54|113452|transmembrane protein 54##BC001418|TMEM54|113452|transmembrane protein 54##BC013953|TMEM54|113452|transmembrane protein 54##NM_033504|TMEM54|113452|transmembrane protein 54##BC023260|TMEM54|113452|transmembrane protein 54##NM_001127361|RNF19B|127544|ring finger protein 19B##NM_153341|RNF19B|127544|ring finger protein 19B##AK131439|RNF19B|127544|ring finger protein 19B##AB451267|AK2|204|adenylate kinase 2##AB451394|AK2|204|adenylate kinase 2##AY080900|AK2|204|adenylate kinase 2##U54645|AK2|204|adenylate kinase 2##BC009405|AK2|204|adenylate kinase 2##AK307731|AK2|204|adenylate kinase 2##AK295105|AK2|204|adenylate kinase 2##AK296863|AK2|204|adenylate kinase 2##BC026705|AK2|204|adenylate kinase 2##AK291676|AK2|204|adenylate kinase 2##AK297036|AK2|204|adenylate kinase 2	1.072573	CTCF.p2:22:0.974
chr14	25159811	25159938	reg1034775.p1	4.229	+	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-56456	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-81013	-	AB590242 CR456807 CR541704 DQ893067 DQ896320 M16117 TSC_hg19_v1_chr14_-_25045457 AK225914 BC014460 NM_001911	-114428	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	359364	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1907114	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	4076354	+	AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##CR456807|CTSG|1511|cathepsin G##CR541704|CTSG|1511|cathepsin G##DQ893067|CTSG|1511|cathepsin G##DQ896320|CTSG|1511|cathepsin G##M16117|CTSG|1511|cathepsin G##AK225914|CTSG|1511|cathepsin G##BC014460|CTSG|1511|cathepsin G##NM_001911|CTSG|1511|cathepsin G##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1	0.466667	CTCF.p2:-9:0.467
chr15	86384087	86384191	reg1001790.p2	4.229	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-45944	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-46042	-	AF127481 NM_144767	-163872	+	NM_152336	301102	+	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	2415827	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	2626489	-	NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46	0.0	
chr17	29909266	29909377	reg1034801.p1	4.229	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-94260	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-190457	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-190654	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	276950	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	319345	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	319410	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.0	
chr17	7117252	7117384	reg1029547.p2	4.229	+	TSC_hg19_v1_chr17_-_7106561 BC040533	-10724	-	M10058 AB070933 TSC_hg19_v1_chr17_-_7082680 AK308375 AK124286 NM_001197216 NM_001671	-34550	-	BC032130 TSC_hg19_v1_chr17_-_7082568	-34754	-	TSC_hg19_v1_chr17_-_7120929 AK307804 NM_001128827 AK293835	3619	-	BC136553 BC144237 U83192 AK296357 TSC_hg19_v1_chr17_-_7123139	5713	-	AK097243 NM_000018 NM_001033859 AK293537 TSC_hg19_v1_chr17_+_7123218 AK056956 AK302653 BC012912 BC000399 X86556 BC020218	5877	+	BC040533|DLG4|1742|discs, large homolog 4 (Drosophila)##M10058|ASGR1|432|asialoglycoprotein receptor 1##AB070933|ASGR1|432|asialoglycoprotein receptor 1##AK308375|ASGR1|432|asialoglycoprotein receptor 1##AK124286|ASGR1|432|asialoglycoprotein receptor 1##NM_001197216|ASGR1|432|asialoglycoprotein receptor 1##NM_001671|ASGR1|432|asialoglycoprotein receptor 1##BC032130|ASGR1|432|asialoglycoprotein receptor 1##AK307804|DLG4|1742|discs, large homolog 4 (Drosophila)##NM_001128827|DLG4|1742|discs, large homolog 4 (Drosophila)##AK293835|DLG4|1742|discs, large homolog 4 (Drosophila)##BC136553|DLG4|1742|discs, large homolog 4 (Drosophila)##BC144237|DLG4|1742|discs, large homolog 4 (Drosophila)##U83192|DLG4|1742|discs, large homolog 4 (Drosophila)##AK296357|DLG4|1742|discs, large homolog 4 (Drosophila)##AK097243|ACADVL|37|acyl-CoA dehydrogenase, very long chain##NM_000018|ACADVL|37|acyl-CoA dehydrogenase, very long chain##NM_001033859|ACADVL|37|acyl-CoA dehydrogenase, very long chain##AK293537|ACADVL|37|acyl-CoA dehydrogenase, very long chain##AK056956|ACADVL|37|acyl-CoA dehydrogenase, very long chain##AK302653|ACADVL|37|acyl-CoA dehydrogenase, very long chain##BC012912|ACADVL|37|acyl-CoA dehydrogenase, very long chain##BC000399|ACADVL|37|acyl-CoA dehydrogenase, very long chain##X86556|ACADVL|37|acyl-CoA dehydrogenase, very long chain##BC020218|ACADVL|37|acyl-CoA dehydrogenase, very long chain	0.87867	CTCF.p2:-13:0.879
chr2	102600528	102600620	reg1026737.p1	4.229	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	-92042	+	TSC_hg19_v1_chr2_+_102508334 BC045694	-92232	+	TSC_hg19_v1_chr2_+_102314168 NM_001242560 NM_004834 NM_145686 BC064691 AK296396 AF096300 NM_001242559 NM_145687 AB384511 AY212247 AY834276	-286222	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	7789	+	BC027733 BC012346 NM_173343	14883	+	TSC_hg19_v1_chr2_+_102759205 X16896	158658	+	BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II##BC027733|IL1R2|7850|interleukin 1 receptor, type II##BC012346|IL1R2|7850|interleukin 1 receptor, type II##NM_173343|IL1R2|7850|interleukin 1 receptor, type II##X16896|IL1R1|3554|interleukin 1 receptor, type I	0.021176	
chr2	242041752	242041849	reg1028574.p1	4.229	+	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	-74	-	NM_001080437	-103546	+	AK056601 NM_001085437	-206228	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	47071	-	AK308015 BC051689 TSC_hg19_v1_chr2_+_242089094	47258	+	CR749231 NM_001252120	47593	-	BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase##AK308015|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC051689|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##CR749231|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252120|PASK|23178|PAS domain containing serine/threonine kinase	0.0	
chr10	61640785	61640965	reg1023221.p2	4.228	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-171151	-	AK299924 NM_001143773	-518215	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-518590	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	25326	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	25449	-	AK292927 AK092527 NM_001149	259841	-	AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.0	
chr1	177928977	177929099	reg1030022.p1	4.228	+	AB051534 AB161694 BC028036 NM_021165	-788457	+	AK296524 TSC_hg19_v1_chr1_+_177140093	-788960	+	TSC_hg19_v1_chr1_-_177134042 AK309094	-794963	-	AB063357 NM_033127 TSC_hg19_v1_chr1_-_177939202	10088	-	BC009106 TSC_hg19_v1_chr1_-_177939393	10332	-	TSC_hg19_v1_chr1_-_178007060 AK092831 BX538051 AB067515	78061	-	AB051534|FAM5B|57795|family with sequence similarity 5, member B##AB161694|FAM5B|57795|family with sequence similarity 5, member B##BC028036|FAM5B|57795|family with sequence similarity 5, member B##NM_021165|FAM5B|57795|family with sequence similarity 5, member B##AK296524|FAM5B|57795|family with sequence similarity 5, member B##AK309094|ASTN1|460|astrotactin 1##AB063357|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##NM_033127|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##BC009106|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AK092831|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##BX538051|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene	0.0	
chr1	247282402	247282518	reg1025330.p2	4.228	+	TSC_hg19_v1_chr1_-_247275541 AK127619 NM_207401	-6838	-	TSC_hg19_v1_chr1_-_247267631 AK022668 AX721155 AK056020 AX721139 BC015312 NM_001142572 NM_024804	-14799	-	TSC_hg19_v1_chr1_-_247242116 AK126366 NM_001204220 NM_033213	-40347	-	BC032514 BC096349 BC096350 BC096351 BC099661 BC013605 AK054647 NM_001243740 NM_003431	52824	-	BC126341 BC126367 NM_173858	136863	+	TSC_hg19_v1_chr1_-_247494994 BC007263 NM_032752	212557	-	AK127619|C1orf229|388759|chromosome 1 open reading frame 229##NM_207401|C1orf229|388759|chromosome 1 open reading frame 229##AK022668|ZNF669|79862|zinc finger protein 669##AK056020|ZNF669|79862|zinc finger protein 669##BC015312|ZNF669|79862|zinc finger protein 669##NM_001142572|ZNF669|79862|zinc finger protein 669##NM_024804|ZNF669|79862|zinc finger protein 669##AK126366|ZNF670-ZNF695|100533111|ZNF670-ZNF695 readthrough##NM_001204220|ZNF670|93474|zinc finger protein 670##NM_033213|ZNF670|93474|zinc finger protein 670##BC032514|ZNF124|7678|zinc finger protein 124##BC096349|ZNF124|7678|zinc finger protein 124##BC096350|ZNF124|7678|zinc finger protein 124##BC096351|ZNF124|7678|zinc finger protein 124##BC099661|ZNF124|7678|zinc finger protein 124##BC013605|ZNF124|7678|zinc finger protein 124##AK054647|ZNF124|7678|zinc finger protein 124##NM_001243740|ZNF124|7678|zinc finger protein 124##NM_003431|ZNF124|7678|zinc finger protein 124##BC126341|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC126367|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##NM_173858|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC007263|ZNF496|84838|zinc finger protein 496##NM_032752|ZNF496|84838|zinc finger protein 496	0.958985	CTCF.p2:-13:0.959
chr14	106829084	106829152	reg1002573.p1	4.228	+	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 AF044420 AF044422 AF044425 AF044427 AF044442 AF090355 AF099201 AF174074 AF471431 AJ132850 AJ271549 AJ300787 AJ300793 AJ300798 AJ300803 AJ308463 AJ633622 AJ633623 AY028777 AY033265 AY033266 AY033267 AY530317 AY554176 AY640472 AY640475 AY640477 AY640483 AY640501 AY640511 AY640535 AY640539 AY640541 AY640544 AY640549 AY640550 AY640557 AY640558 AY640561 AY640568 AY640569 AY640573 AY640577 AY685306 AY781859 AY846266 AY846267 AY866744 AY941844 AY941856 AY941857 AY941860 AY941863 AY941865 AY941866 AY941868 AY941892 AY941896 AY941898 AY941901 AY941907 AY941913 AY941935 AY941942 AY941950 AY941953 AY941968 AY941970 AY941982 AY941983 AY941985 AY941986 AY941988 AY941989 AY944708 AY944716 AY971015 AY971027 AY971037 AY971078 AY971081 AY971115 AY971120 AY971130 AY971135 DQ065629 DQ065669 DQ065674 DQ065689 DQ065692 DQ065718 DQ065725 DQ431499 DQ431621 DQ431627 DQ840705 DQ840715 DQ840744 DQ926087 DQ926091 DQ926150 DQ926207 DQ926222 DQ926372 DQ926388 DQ926512 DQ926569 DQ926578 DQ926634 EF177978 EF178004 EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 AY866854 AY882579 AY927661 AY941847 AY941848 AY941861 AY941864 AY941867 AY941869 AY941871 AY941872 AY941874 AY941875 AY941893 AY941894 AY941895 AY941897 AY941904 AY941908 AY941922 AY941932 AY941933 AY941934 AY941944 AY941946 AY941951 AY941954 AY941956 AY941963 AY941964 AY941966 AY941967 AY941969 AY944690 AY971127 D83678 D83681 D83684 D83685 D83694 DQ005284 DQ065696 DQ100659 DQ100685 DQ100775 DQ100819 DQ100846 DQ100857 DQ100907 DQ100930 DQ212508 DQ212509 DQ431475 DQ431476 DQ431501 DQ431573 DQ431575 DQ431576 DQ431580 DQ431582 DQ431606 DQ431607 DQ431622 DQ431628 DQ431633 DQ431634 DQ431637 DQ431642 DQ431643 DQ431646 DQ431653 DQ431658 DQ535263 DQ535266 DQ535268 DQ535293 DQ535308 DQ535373 DQ535382 DQ535397 DQ535424 DQ535426 DQ535429 DQ535437 DQ535439 DQ535440 DQ535461 DQ535466 DQ840703 DQ840706 DQ840712 DQ840713 DQ840745 DQ840782 DQ840813 DQ923052 DQ926032 DQ926064 DQ926133 DQ926340 DQ926374 DQ926384 DQ926552 EF177969 EF177975 EF177991 EF178015 EF178075 EF178091 EF178098 EF178099 EF221755 EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	-37824	-	U32154 AF460767 DQ524080 DQ454738 Y08403 HM774396 AF103161 AJ245070 AY866645 AM233757 AY670731 DQ005273 AB063909 AB363132 AJ556745 AY670715 AY670719 AY670726 AY670727 AY670745 AY670770 AY670773 AY670784 AY670819 AY670831 AY670837 AY670857 AY671081 AY671102 AY671324 AY671379 AY671400 AY671500 AY671586 AY671639 AY671641 AY671703 AY671775 AY671785 AY781815 AY781827 AY866636 DQ065711 DQ926028 DQ926188 DQ926206 FJ492934 AJ430733 EF178114 FJ385294 HM152518 AY392953 L28053 AY671012 AY671034 AY671045 AY671152 AY671174 AY671714 AY671721 L03677 Z75396 Z75404 L23570 BC073765 AK130813 AK301332 AK130585 AK128579 AK128568 AK129620 TSC_hg19_v1_chr14_-_106781004	-48348	-	AJ305231 DQ118259 HM774835 DQ926094 AY866678 EU794438 Z80845 BC087841 TSC_hg19_v1_chr14_-_106774560	-54683	-	AF460708 AF460709 AF460785 AY003807 AY003817 DQ454548 M33859 M33860 DQ454427 DQ454852 DQ454425 DQ454627 DQ454856 GU552743 DQ454416 DQ454458 GQ232904 GU552731 GU552736 AY003787 AF017463 GU552721 GU552724 GU552725 GU552726 GU552727 GU552728 GU552729 GU552730 AY003850 DQ454418 DQ454671 GQ232774 DQ454432 DQ454433 DQ454901 DQ454979 DQ454980 GQ232865 HM995239 JF810276 AY003855 DQ454422 DQ454434 DQ454622 DQ454870 DQ523887 HM116153 HM116169 HM116182 Z30552 Z30557 Z30561 Z30562 Z30573 Z30576 Z30578 Z30580 Z30581 Z30591 Z30599 Z30674 Z30675 Z30677 DQ454531 DQ454860 DQ454903 EU099089 AF004937 AY003796 AY003804 DQ454392 DQ454610 DQ454833 EU620002 FJ840008 FJ840011 FJ840012 FJ840020 FJ840055 FJ874002 FJ874054 FJ874065 FJ874072 FJ874075 FJ874095 HM116113 HM116114 HM116155 HM116159 HM116160 HM116168 HM116177 HM116195 HM116199 HM116226 AF017459 AF017460 EU619988 AJ487490 AY003825 AJ253061 EU350428 DQ454982 X75022 EF091922 EF175396 EF175402 EF407849 EF441754 GU358660 JF810277 GQ232847 GQ232867 GQ232891 GQ232893 GQ232895 GQ232896 GQ232900 GQ232901 GQ232902 DQ454645 EU099068 EU099071 AF103299 EU090244 EU099076 EU099098 HQ392881 HQ392885 HQ392917 AJ253080 EU099079 EU099096 EU099156 EU099191 EU099252 AJ253066 AM183974 AM183975 AM183976 AM183977 AM183978 AM183995 AF484411 AF103180 AJ253083 AF103278 EF624236 AJ240558 AJ253067 S79918 AJ253059 AJ253072 AJ253074 AJ253079 AJ253081 AJ253082 AJ253084 AJ253087 AJ253088 AJ253089 AJ253090 AJ253091 AJ253092 AJ253093 AJ253094 AJ253095 AJ253098 AJ253102 AJ253103 AJ253104 AJ253108 AJ253109 AJ253110 AJ253112 AJ240555 AJ240556 AJ240557 AJ240560 AJ240561 AJ240566 AJ240574 AJ240575 AJ240576 AJ240577 AJ240580 AJ240581 AJ240590 AJ240595 AJ240604 AJ253044 AJ253050 AJ253054 AJ253077 AJ253085 AY671386 HM996508 Y17927 Y17928 Y17930 Y17931 Y17932 Y17933 Y17934 Y17943 Y17944 Y17945 Y17947 Y17948 Y17949 AY998719 DQ100788 DQ100796 JN110760 JN110800 JN110847 FJ385331 FJ385337 FJ385351 FJ385378 HM774705 HM774878 AF103173 AY193818 EU146315 EU146358 EU146377 EU146394 U21257 U21267 U21268 HM774736 AJ222555 HM995235 X87438 AJ222547 AJ222548 AJ222549 AJ222550 AJ222552 AJ222556 AJ222557 AJ222558 AJ222559 AJ222560 AJ222561 AJ222562 AJ222563 AJ222564 AJ222565 AJ222566 AJ222567 AJ222568 AJ222569 AJ222570 AJ222571 AJ222573 AJ222574 AJ222575 AJ222576 AJ222577 AJ222578 Z46300 Z46301 Z46302 Z46315 Z46316 Z46317 Z46318 Z46319 Z46320 Z46321 Z46322 Z46323 Z46324 Z46325 Z46326 Z46327 Z46328 Z46329 Z46330 Z46331 Z46332 Z46333 Z46334 Z46335 Z46336 Z46337 Z46338 Z46339 Z49139 AJ244942 AJ579251 X64156 X64159 AB063716 AJ244940 AJ279524 AJ279537 AJ556751 AJ579178 AY268371 DQ523935 DQ523975 DQ523980 DQ523984 DQ523987 DQ523990 DQ524003 DQ524006 DQ524007 DQ524018 DQ524044 DQ524065 DQ524068 DQ524074 DQ524077 AB067135 AB067136 AJ244997 AM233792 AM233793 AM233795 AM233801 DQ926349 DQ926350 L34163 X64235 AJ300804 AY670741 AY670790 AY670791 AY670810 AY670816 HM994959 HM995182 HM995183 HM995184 HM995185 HM995187 HM995189 HM995203 HM995204 HM995205 HM995206 HM995207 HM995211 HM995216 HM995244 HM995246 HM995249 HM995308 HM995310 HM995472 HM995477 HM995479 HM995481 HM995550 HM995553 HM995554 HM995743 HM995982 HM996230 HM996238 HM996535 AB063661 AB063671 AB063674 AB066914 AB066915 AB066916 AB066917 AB066918 AB066919 AB066920 AB066921 AB066923 AB066924 AB067034 AB067035 AB067036 AB067037 AB067038 AB067039 AB067040 AB067041 AB067044 AB067046 AB067049 AB067052 AB067053 AB067054 AB067055 AB067056 AB067057 AB067058 AB067059 AB067060 AB067064 AB067066 AB067067 AB067068 AB067084 AB067085 AB067088 AB067089 AB067090 AB067091 AB067092 AB067093 AB067132 AB067133 AB067134 AB067137 AB067142 AB067143 AB067144 AB067145 AB067146 AB067148 AB067149 AB067151 AB110646 AB363152 AB363153 AB363154 AF021948 AF021957 AF021990 AF021991 AF021997 AF022004 AF022005 AF052527 AF062104 AF062113 AF062231 AF062234 AF107233 AF107239 AF107241 AF174041 AF174049 AF174054 AF174085 AF174086 AF174088 AF245309 AF262072 AF262097 AF262100 AF262125 AF262174 AF372845 AJ239335 AJ239362 AJ239377 AJ244929 AJ244931 AJ244935 AJ244937 AJ244938 AJ244939 AJ244941 AJ244943 AJ244944 AJ244951 AJ244959 AJ244960 AJ244962 AJ244966 AJ244967 AJ244968 AJ244969 AJ244972 AJ244973 AJ244975 AJ244978 AJ244982 AJ244984 AJ244985 AJ244987 AJ244988 AJ244990 AJ244991 AJ244992 AJ244994 AJ245008 AJ245009 AJ245011 AJ245013 AJ245017 AJ245028 AJ245035 AJ245036 AJ245039 AJ245040 AJ245041 AJ245042 AJ245043 AJ245044 AJ245046 AJ245049 AJ245051 AJ245052 AJ245054 AJ245057 AJ245065 AJ245236 AJ245238 AJ249631 AJ279513 AJ279519 AJ279521 AJ279526 AJ279531 AJ279535 AJ556773 AJ574778 AJ579118 AJ579121 AJ579122 AJ579124 AJ579129 AJ579135 AJ579164 AJ579165 AJ579167 AJ579175 AJ579176 AJ579201 AJ579206 AJ579208 AJ579211 AJ579213 AJ579240 AJ579241 AJ579242 AJ579243 AJ579246 AJ579248 AJ579249 AJ579250 AJ579253 AJ579255 AJ579256 AJ579257 AJ579258 AJ579259 AJ579260 AJ579286 AJ579287 AJ579289 AJ579290 AJ579302 AJ579304 AY033257 AY062304 AY553641 AY553646 AY670708 AY670709 AY670710 AY670711 AY670716 AY670717 AY670718 AY670720 AY670721 AY670722 AY670723 AY670724 AY670730 AY670736 AY670738 AY670739 AY670743 AY670749 AY670750 AY670755 AY670757 AY670760 AY670761 AY670763 AY670766 AY670767 AY670768 AY670772 AY670775 AY670777 AY670779 AY670781 AY670782 AY670785 AY670787 AY670789 AY670794 AY670795 AY670796 AY670798 AY670801 AY670803 AY670804 AY670811 AY670813 AY670814 AY670815 AY670824 AY670826 AY670827 AY670828 AY670833 AY670834 AY670835 AY670838 AY670839 AY670840 AY670841 AY670842 AY670843 AY670845 AY670846 AY670851 AY670853 AY670855 AY670856 AY670860 AY670863 AY670864 AY670867 AY670870 AY670871 AY670873 AY670875 AY670878 AY670879 AY670882 AY670883 AY670884 AY670885 AY670890 AY670892 AY670893 AY670898 AY670899 AY670900 AY670903 AY670904 AY670905 AY670907 AY670911 AY670913 AY670916 AY670918 AY670919 AY670924 AY670928 AY670929 AY670931 AY670932 AY670935 AY670940 AY670943 AY670944 AY670946 AY670949 AY670952 AY670953 AY670954 AY670962 AY670965 AY670973 AY670974 AY670975 AY670976 AY670977 AY670981 AY670990 AY671010 AY671015 AY671024 AY671047 AY671065 AY671073 AY671078 AY671079 AY671087 AY671093 AY671094 AY671095 AY671096 AY671097 AY671099 AY671100 AY671103 AY671104 AY671105 AY671106 AY671107 AY671108 AY671110 AY671113 AY671115 AY671117 AY671118 AY671120 AY671121 AY671122 AY671123 AY671125 AY671128 AY671129 AY671132 AY671134 AY671135 AY671139 AY671145 AY671153 AY671155 AY671161 AY671209 AY671240 AY671245 AY671257 AY671274 AY671277 AY671283 AY671313 AY671314 AY671315 AY671316 AY671317 AY671319 AY671321 AY671322 AY671323 AY671328 AY671330 AY671332 AY671341 AY671345 AY671347 AY671348 AY671349 AY671354 AY671364 AY671366 AY671370 AY671371 AY671380 AY671382 AY671383 AY671393 AY671409 AY671413 AY671416 AY671422 AY671424 AY671425 AY671427 AY671428 AY671429 AY671430 AY671434 AY671435 AY671436 AY671438 AY671441 AY671443 AY671444 AY671445 AY671446 AY671447 AY671449 AY671452 AY671453 AY671454 AY671455 AY671461 AY671462 AY671464 AY671468 AY671471 AY671478 AY671480 AY671481 AY671483 AY671486 AY671487 AY671491 AY671492 AY671503 AY671505 AY671507 AY671508 AY671510 AY671511 AY671515 AY671518 AY671519 AY671525 AY671527 AY671528 AY671530 AY671532 AY671535 AY671538 AY671539 AY671540 AY671541 AY671543 AY671544 AY671548 AY671555 AY671556 AY671561 AY671564 AY671565 AY671566 AY671568 AY671573 AY671574 AY671577 AY671579 AY671580 AY671581 AY671585 AY671587 AY671591 AY671593 AY671595 AY671612 AY671614 AY671617 AY671619 AY671620 AY671625 AY671629 AY671630 AY671632 AY671634 AY671637 AY671640 AY671642 AY671644 AY671648 AY671650 AY671651 AY671653 AY671658 AY671659 AY671660 AY671663 AY671668 AY671671 AY671676 AY671682 AY671684 AY671685 AY671688 AY671690 AY671691 AY671694 AY671697 AY671698 AY671699 AY671700 AY671702 AY671704 AY671706 AY671707 AY671708 AY671712 AY671716 AY671718 AY671724 AY671732 AY671733 AY671734 AY671735 AY671737 AY671739 AY671741 AY671746 AY671749 AY671750 AY671751 AY671753 AY671756 AY671763 AY671764 AY671765 AY671766 AY671767 AY671769 AY671771 AY671776 AY671781 AY671784 AY885181 AY941889 AY941914 AY941957 DQ005274 DQ005285 DQ100660 DQ100674 DQ100703 DQ100725 DQ100792 DQ100829 DQ100832 DQ100964 DQ926158 DQ926198 DQ926208 DQ926421 DQ926458 DQ926468 DQ926470 DQ926478 DQ926497 DQ926599 DQ926603 EF544907 EF544958 EF544959 EF544973 FJ208782 FJ492903 FJ492909 FJ492910 GU570373 HM152498 HM152511 HM152516 HQ392880 HQ689741 L12192 L23518 L23934 L25293 M26998 M74468 S64473 S66098 S67110 U00497 U00556 U22391 U71103 U89766 U97246 X56592 X87440 Z35492 Z46269 Z46271 Z46272 Z46273 Z46275 Z46277 Z46279 Z46282 Z46304 Z46305 Z46306 Z46307 Z46308 Z46340 Z46341 Z46342 Z49135 Z49140 Z49141 Z49143 Z70604 Z70605 Z70610 Z70616 Z70617 Z70625 Z70626 Z70627 Z70637 Z70638 Z70639 Z70640 Z70641 Z70642 Z70643 Z70644 Z70650 Z74665 Z74695 AY670806 AY670808 AY957532 AY686937 AY957534 DQ535279 DQ535294 DQ535296 DQ535314 DQ535320 DQ535326 DQ535459 EF178028 EF178136 HM996258 M84508 FJ039792 M84512 X54441 AY671298 AY670999 AY671028 AF283780 AF283781 M74018 M74021 AY670983 AY670985 AY670987 AY670989 AY670992 AY670993 AY670995 AY670997 AY670998 AY671018 AY671025 AY671033 AY671043 AY671307 AY671310 AY671046 AY671049 AY671205 AF283784 AY671151 AY671233 AJ579207 AY670982 AY671003 AY671029 AY671050 AY671156 AY671160 AY671171 AY671177 AY671190 AY671199 AY671201 AY671212 AY671226 AY671232 AY671235 AY671236 AY671250 AY671251 AY671261 AY671262 AY671270 AY671272 AY671278 AY671281 AY671287 AY671308 Z47229 AF062101 AF062146 AF062152 AF062158 AF062173 AF062181 AF062183 AF062187 AF062192 AF062196 AF062217 AF062218 AF062250 AJ579203 AY204755 AY204757 AY204759 AY204761 AY671006 AY671008 AY671061 AY671064 AY671168 AY671175 AY671183 AY671200 AY671207 AY671220 AY671238 AY671258 AY671268 AY671275 AY671289 AY671290 AY671303 AY671305 AY671696 AY671705 AY671713 AY671722 AY671727 AY671728 S59161 X64152 X64153 X65904 Z47228 Z47234 Z47241 Z75362 Z75374 Z75376 Z75379 Z75386 Z75389 Z75392 Z75394 Z75398 CU674902 CU678316 BC002963 BC073767 CU675962 BC017356 BC019235 BC001872 BC006180 BX538126 AK301454 TSC_hg19_v1_chr14_-_106830060 AK126280 AK128649 AK127921 CR933690	788	-	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 AJ245014 AJ245018 AJ245021 AJ245023 AJ245024 AJ245030 AJ245033 AJ245034 AJ245038 AJ245056 AJ245060 AJ245061 AJ245071 AJ249629 AJ279514 AJ279515 AJ279525 AJ279530 AJ308449 AJ389175 AJ389176 AJ414019 AJ416561 AJ555264 AJ556674 AJ556675 AJ556676 AJ556691 AJ556693 AJ574781 AJ579117 AJ579126 AJ579130 AJ579131 AJ579134 AJ579138 AJ579166 AJ579168 AJ579169 AJ579170 AJ579179 AJ579200 AJ579202 AJ579205 AJ579209 AJ579210 AJ579214 AJ579244 AJ579245 AJ579292 AJ579293 AJ579297 AJ617569 AY165854 AY268372 AY268373 AY300037 AY577300 AY640552 AY670713 AY670734 AY670740 AY670742 AY670747 AY670751 AY670754 AY670758 AY670762 AY670771 AY670774 AY670799 AY670802 AY670805 AY670817 AY670822 AY670823 AY670825 AY670849 AY670850 AY670858 AY670859 AY670865 AY670874 AY670881 AY670894 AY670896 AY670897 AY670902 AY670914 AY670920 AY670922 AY670947 AY670950 AY670955 AY670960 AY670961 AY670970 AY670972 AY670978 AY670980 AY670986 AY670991 AY671017 AY671060 AY671089 AY671090 AY671101 AY671109 AY671112 AY671114 AY671119 AY671124 AY671126 AY671136 AY671137 AY671140 AY671146 AY671264 AY671318 AY671368 AY671369 AY671384 AY671392 AY671418 AY671433 AY671439 AY671482 AY671489 AY671517 AY671524 AY671534 AY671536 AY671545 AY671552 AY671560 AY671562 AY671563 AY671567 AY671572 AY671576 AY671578 AY671582 AY671583 AY671588 AY671598 AY671599 AY671600 AY671602 AY671616 AY671624 AY671626 AY671635 AY671638 AY671661 AY671672 AY671677 AY671681 AY671730 AY671736 AY671744 AY671752 AY671773 AY671774 AY671778 AY671780 AY671786 AY781849 AY885184 AY941931 AY941962 AY941975 AY960198 AY960201 AY971014 AY971044 AY971045 AY971080 AY971086 AY998723 DQ005257 DQ065676 DQ100673 DQ100687 DQ100701 DQ100784 DQ100821 DQ100822 DQ100824 DQ100825 DQ100897 DQ100953 DQ205162 DQ205173 DQ212518 DQ212520 DQ328872 DQ431572 DQ431610 DQ926162 DQ926290 DQ926291 DQ926302 DQ926317 DQ926323 DQ926515 DQ926519 DQ926521 DQ926608 FJ039783 FJ039790 FJ039791 FJ385371 FJ385402 FR820867 FR820868 FR820869 FR820870 FR820871 FR820872 FR820873 FR820875 GU570374 HM152512 HM152521 HQ689769 JN201901 L12190 L43117 U00494 U00566 U00571 U00578 U00581 U64496 U96278 U96280 U96285 U96287 U97243 X84336 X84339 Y08428 Y09249 Y09390 Z18316 Z46285 Z70608 Z70621 Z70622 Z70623 Z70631 Z70632 Z70654 Z70655 Z70656 Z70657 DQ926182 DQ926347 DQ926348 AY944695 DQ535289 DQ535393 DQ535427 DQ535433 DQ535456 EF177973 EF178111 EF178132 FJ385279 AJ579303 X54447 AY392937 X17678 S63731 X54437 Z14197 AY671021 AY670994 AY671000 AY671001 AY671009 AY671012 AY671016 AY671023 AY671031 AY671036 AY671054 AY671142 AY671197 AY671335 AY671182 AF013622 AY671048 AY671052 AY671159 AY671179 AY671239 AY671263 AY671276 AY671279 AY671282 AF013619 AF062204 AF062240 AF247737 AY671165 AY671185 AY671217 AY671297 AY671693 AY671723 AY671725 CU677619 EU937522 L23556 L38425 M99607 U86523 U86524 X65903 X65911 Z14198 Z75364 Z75388 AY671162 X52895 TSC_hg19_v1_chr14_-_106878091 X56158 M97921 AF417843 AK057754 AK057775 AK130529 BC025985 BX640824 AK130609 Z14206 AK126352 AK129514 AK129592 AK129637 AK130589 AK130611 BC016369 BX538077 BX648082 BX648874 Z14195 AK095222 AK303185	48789	-	GQ232933 AY003798 FJ840151 FJ873995 EF407840 AM279492 AM279629 HM774186 AY957513 EF633772 AY062305 DQ524058 AF174122 AY944701 DQ065664 DQ065670 DQ065719 DQ065726 DQ926522 EF178118 EF633803 FJ385316 GU570332 HM995173 HM995251 HM995315 HM995321 HM995523 AB021518 AB021527 AF035043 AF471473 AJ579183 DQ535349 DQ535444 GU570331 GU570333 X95661 Z47231 BC092518 TSC_hg19_v1_chr14_-_106926725 BX647160 AK123783 AK097306 AK097329	97441	-	BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073765|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK130813|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130585|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128568|IGHD|3495|immunoglobulin heavy constant delta##AK129620|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC087841|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF174049|SKAP2|8935|src kinase associated phosphoprotein 2##BC002963|IGHM|3507|immunoglobulin heavy constant mu##BC073767|IGHM|3507|immunoglobulin heavy constant mu##BC017356|IGHM|3507|immunoglobulin heavy constant mu##BC019235|IGHM|3507|immunoglobulin heavy constant mu##BC001872|IGHM|3507|immunoglobulin heavy constant mu##BC006180|IGHM|3507|immunoglobulin heavy constant mu##BX538126|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK126280|IGHD|3495|immunoglobulin heavy constant delta##AK128649|IGHD|3495|immunoglobulin heavy constant delta##AK127921|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.0	
chr17	16900961	16901078	reg1031860.p1	4.228	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	-25615	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-307415	+	AK131401 NM_020787	-343858	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	44945	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	208594	-	TSC_hg19_v1_chr17_-_17109636 BC031263 AK295282 NM_178836	208638	-	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6##BC031263|PLD6|201164|phospholipase D family, member 6##AK295282|PLD6|201164|phospholipase D family, member 6##NM_178836|PLD6|201164|phospholipase D family, member 6	1.383509	CTCF.p2:27:0.655	CTCF.p2:-33:0.728
chr18	46974319	46974443	reg1031790.p1	4.228	+	AF010193 NM_001190821 NM_005904	-497301	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	-497614	-	AK301535 NM_001190822	-498679	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	12670	-	TSC_hg19_v1_chr18_-_47013575 AB097012	39184	-	TSC_hg19_v1_chr18_-_47013599 BC093004	39218	-	AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin##AB097012|C18orf32|497661|chromosome 18 open reading frame 32##BC093004|C18orf32|497661|chromosome 18 open reading frame 32	0.878975	CTCF.p2:5:0.879
chr19	43188203	43188321	reg1031749.p1	4.228	+	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	-89232	-	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	-155670	-	X16356 TSC_hg19_v1_chr19_-_43031473	-156853	-	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	56339	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	81562	-	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	195563	-	DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1	0.959364	CTCF.p2:8:0.959
chr2	190277076	190277185	reg1002945.p1	4.228	+	AB384824 J04478 Y14690 AB209045 BC086874 AK297936 TSC_hg19_v1_chr2_-_190044488 AK300146 M31365 NM_000393	-232663	-	TSC_hg19_v1_chr2_+_189839133 AB384877 X07240	-437957	+	X14420 BX649097 TSC_hg19_v1_chr2_+_189839117	-438012	+	BC040567 NM_032168 TSC_hg19_v1_chr2_+_190306177	29040	+	TSC_hg19_v1_chr2_+_190306204 AK022607 AK290445 CR749440 AK022581 AK091546 AX747050	29079	+	AF171087 AF215636 AF226614 AF231121 AL136944 BC035893 TSC_hg19_v1_chr2_-_190445510 AK223236 AK292146 AK314827	168359	-	J04478|COL5A2|1290|collagen, type V, alpha 2##Y14690|COL5A2|1290|collagen, type V, alpha 2##AB209045|COL5A2|1290|collagen, type V, alpha 2##BC086874|COL5A2|1290|collagen, type V, alpha 2##AK297936|COL5A2|1290|collagen, type V, alpha 2##AK300146|COL5A2|1290|collagen, type V, alpha 2##M31365|COL5A2|1290|collagen, type V, alpha 2##NM_000393|COL5A2|1290|collagen, type V, alpha 2##X07240|COL3A1|1281|collagen, type III, alpha 1##X14420|COL3A1|1281|collagen, type III, alpha 1##BC040567|WDR75|84128|WD repeat domain 75##NM_032168|WDR75|84128|WD repeat domain 75##AK022607|WDR75|84128|WD repeat domain 75##AK290445|WDR75|84128|WD repeat domain 75##CR749440|WDR75|84128|WD repeat domain 75##AK022581|WDR75|84128|WD repeat domain 75##AK091546|WDR75|84128|WD repeat domain 75##AF171087|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF215636|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF226614|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AF231121|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AL136944|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##BC035893|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK223236|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK292146|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1##AK314827|SLC40A1|30061|solute carrier family 40 (iron-regulated transporter), member 1	0.0	
chr3	53778473	53778624	reg1035869.p1	4.228	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	-249437	+	TSC_hg19_v1_chr3_+_53528709 M76558	-249889	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	-396955	-	TSC_hg19_v1_chr3_-_53880427 NM_018397	101871	-	TSC_hg19_v1_chr3_+_53880576 NM_018725	102024	+	TSC_hg19_v1_chr3_+_53880594 AK307749	102047	+	NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018397|CHDH|55349|choline dehydrogenase##NM_018725|IL17RB|55540|interleukin 17 receptor B##AK307749|IL17RB|55540|interleukin 17 receptor B	0.0	
chr4	38818062	38818242	reg1027682.p1	4.228	+	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	-11733	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	-33553	-	AF289565 TSC_hg19_v1_chr4_-_38666549	-151663	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	40276	-	TSC_hg19_v1_chr4_+_38869390 NM_138389 AK304050 AK296859 AK292831 BC040452	51239	+	BC030803 BC060512 AK026888 NM_024943	215858	-	AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6##NM_138389|FAM114A1|92689|family with sequence similarity 114, member A1##AK304050|FAM114A1|92689|family with sequence similarity 114, member A1##AK296859|FAM114A1|92689|family with sequence similarity 114, member A1##AK292831|FAM114A1|92689|family with sequence similarity 114, member A1##BC040452|FAM114A1|92689|family with sequence similarity 114, member A1##BC030803|TMEM156|80008|transmembrane protein 156##BC060512|TMEM156|80008|transmembrane protein 156##AK026888|TMEM156|80008|transmembrane protein 156##NM_024943|TMEM156|80008|transmembrane protein 156	0.0	
chr7	99647341	99647522	reg1031622.p1	4.228	+	NM_145914 TSC_hg19_v1_chr7_+_99647416 CR749301 BC047309 AK301871	-1	+	AK075324 TSC_hg19_v1_chr7_+_99647394 AK292267 AK313884	-33	+	TSC_hg19_v1_chr7_+_99627917 U09848	-19493	+	TSC_hg19_v1_chr7_-_99679347 BC011887 BC025265 BC013603 AK297625 AF193057 AF217988 AK315479 AK091984 AX747291 NM_017715 NM_032924	31896	-	BC041695 TSC_hg19_v1_chr7_-_99680201	32756	-	AK309719 TSC_hg19_v1_chr7_-_99680369	32937	-	NM_145914|ZSCAN21|7589|zinc finger and SCAN domain containing 21##CR749301|ZSCAN21|7589|zinc finger and SCAN domain containing 21##BC047309|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK301871|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK075324|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK292267|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK313884|ZSCAN21|7589|zinc finger and SCAN domain containing 21##U09848|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC011887|ZNF3|7551|zinc finger protein 3##BC025265|ZNF3|7551|zinc finger protein 3##BC013603|ZNF3|7551|zinc finger protein 3##AK297625|ZNF3|7551|zinc finger protein 3##AF193057|ZNF3|7551|zinc finger protein 3##AF217988|ZNF3|7551|zinc finger protein 3##AK315479|ZNF3|7551|zinc finger protein 3##AK091984|ZNF3|7551|zinc finger protein 3##NM_017715|ZNF3|7551|zinc finger protein 3##NM_032924|ZNF3|7551|zinc finger protein 3##AK309719|ZNF3|7551|zinc finger protein 3	0.368159	CTCF.p2:71:0.368
chr8	144089794	144089919	reg1035083.p1	4.228	+	AB463555 NM_000498 X54741	-90600	-	X55764 AF478474 BC096285 BC096286 BC096287 NM_000497 NM_001026213	-128623	-	D84290 NM_002066 BC126336 BC126338	-173635	+	TSC_hg19_v1_chr8_+_144099945 NM_001127213 NM_002346 AK223074 AK129615 AK311983 BC003392 U42376 Z68179	10086	+	TSC_hg19_v1_chr8_+_144102304 BC119708 BC119709 AB529045 U56145	12471	+	TSC_hg19_v1_chr8_+_144120683 BC073830 AK094450 NM_173687 BC120993 BC063497	30819	+	NM_000498|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##X54741|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##X55764|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##AF478474|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096285|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096286|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096287|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_000497|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_001026213|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##D84290|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##NM_002066|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126336|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126338|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##NM_001127213|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002346|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK223074|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK129615|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK311983|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC003392|LY6E|4061|lymphocyte antigen 6 complex, locus E##U42376|LY6E|4061|lymphocyte antigen 6 complex, locus E##Z68179|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119708|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119709|LY6E|4061|lymphocyte antigen 6 complex, locus E##U56145|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC073830|C8orf31|286122|chromosome 8 open reading frame 31##AK094450|C8orf31|286122|chromosome 8 open reading frame 31##NM_173687|C8orf31|286122|chromosome 8 open reading frame 31##BC120993|C8orf31|286122|chromosome 8 open reading frame 31##BC063497|C8orf31|286122|chromosome 8 open reading frame 31	0.797134	CTCF.p2:-24:0.797
chr11	133259161	133259323	reg1023510.p2	4.227	+	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-445637	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-446228	-	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1477903	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	143072	-	AF521713 AK098717 NM_174927 BC058039	456139	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	567640	-	AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B	0.0	
chr1	221967514	221967694	reg1022240.p2	4.227	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-52118	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-52174	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-52196	-	AY358602 BC007638 BC016552 NM_024746	753830	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	795573	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	823796	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.0	
chr15	75268679	75268769	reg1036127.p2	4.227	+	AK000381 NM_017793	-18950	-	CU675593 AY034074 BC002497 BC007270 TSC_hg19_v1_chr15_-_75249114	-19700	-	TSC_hg19_v1_chr15_-_75230386 AK026623 BC024240 NM_004255	-38284	-	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	19183	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	47204	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	47257	+	AK000381|RPP25|54913|ribonuclease P/MRP 25kDa subunit##NM_017793|RPP25|54913|ribonuclease P/MRP 25kDa subunit##AY034074|RPP25|54913|ribonuclease P/MRP 25kDa subunit##BC002497|RPP25|54913|ribonuclease P/MRP 25kDa subunit##BC007270|RPP25|54913|ribonuclease P/MRP 25kDa subunit##AK026623|COX5A|9377|cytochrome c oxidase subunit Va##BC024240|COX5A|9377|cytochrome c oxidase subunit Va##NM_004255|COX5A|9377|cytochrome c oxidase subunit Va##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase	0.758003	CTCF.p2:-32:0.758
chr15	80311727	80311880	reg1036707.p2	4.227	+	AB464467 BT007103 CR541937 CR541962 DQ891109 DQ894290 AY234180 U27467 AL110097 BC016281 AK304026 TSC_hg19_v1_chr15_-_80263526 U29680 Y09397 NM_001114735 NM_004049	-48252	-	TSC_hg19_v1_chr15_-_80216042 AF249277	-95765	-	NM_001100880 NM_001199757	-96140	-	NM_001242911 NM_001242912 NM_001242917 NM_001242918 NM_019006 TSC_hg19_v1_chr15_+_80351970 AF061739	40139	+	TSC_hg19_v1_chr15_+_80352031 BC005283 AK312646	40226	+	TSC_hg19_v1_chr15_+_80352046 AL136598	40264	+	BT007103|BCL2A1|597|BCL2-related protein A1##CR541937|BCL2A1|597|BCL2-related protein A1##CR541962|BCL2A1|597|BCL2-related protein A1##DQ891109|BCL2A1|597|BCL2-related protein A1##DQ894290|BCL2A1|597|BCL2-related protein A1##AY234180|BCL2A1|597|BCL2-related protein A1##U27467|BCL2A1|597|BCL2-related protein A1##AL110097|BCL2A1|597|BCL2-related protein A1##BC016281|BCL2A1|597|BCL2-related protein A1##U29680|BCL2A1|597|BCL2-related protein A1##Y09397|BCL2A1|597|BCL2-related protein A1##NM_001114735|BCL2A1|597|BCL2-related protein A1##NM_004049|BCL2A1|597|BCL2-related protein A1##AF249277|ST20|400410|suppressor of tumorigenicity 20##NM_001100880|ST20|400410|suppressor of tumorigenicity 20##NM_001199757|ST20|400410|suppressor of tumorigenicity 20##NM_001242911|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242912|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242917|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242918|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_019006|ZFAND6|54469|zinc finger, AN1-type domain 6##AF061739|ZFAND6|54469|zinc finger, AN1-type domain 6##BC005283|ZFAND6|54469|zinc finger, AN1-type domain 6##AK312646|ZFAND6|54469|zinc finger, AN1-type domain 6##AL136598|ZFAND6|54469|zinc finger, AN1-type domain 6	0.0	
chr19	2608217	2608397	reg1029019.p2	4.227	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-132069	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-151347	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-151371	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	94388	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	94435	-	AK124445 TSC_hg19_v1_chr19_-_2717420	109042	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr20	47117016	47117197	reg1029436.p1	4.227	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-701788	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-702354	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-986422	+	AB037836 TSC_hg19_v1_chr20_-_47444291	327180	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	327333	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	421212	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.016954	
chr5	171577585	171577766	reg1029001.p1	4.227	+	BC026213 NM_012300 NM_033644 NM_033645	-143799	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	-144031	-	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	-144147	-	AB015718 TSC_hg19_v1_chr5_-_171615170	37463	-	AK307943 TSC_hg19_v1_chr5_-_171615203	37528	-	TSC_hg19_v1_chr5_-_171615241 BC070077 AK313350	37598	-	BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB015718|STK10|6793|serine/threonine kinase 10##AK307943|STK10|6793|serine/threonine kinase 10##BC070077|STK10|6793|serine/threonine kinase 10##AK313350|STK10|6793|serine/threonine kinase 10	0.0	
chr8	22745541	22745633	reg1031370.p2	4.227	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-194803	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-195082	-	AK294968 AK295834 NM_001199881	-195513	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	39737	-	AK092617 BC034917 NM_001160036	99336	+	NM_001160037	107773	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.068724	
chr11	46299907	46300020	reg1017672.p1	4.226	+	TSC_hg19_v1_chr11_+_46299596 AB463458 CU680776 DQ895809 EU176365	-340	+	BC014097 TSC_hg19_v1_chr11_+_46299557 BC015781 AB063321	-403	+	TSC_hg19_v1_chr11_+_46299212 AK314072 NM_052854	-758	+	AK124594 NM_201532	54491	+	NM_201533 TSC_hg19_v1_chr11_+_46366981 AK303322	66935	+	TSC_hg19_v1_chr11_+_46366983 AK123378 BX648433	67021	+	DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AK124594|DGKZ|8525|diacylglycerol kinase, zeta##NM_201532|DGKZ|8525|diacylglycerol kinase, zeta##NM_201533|DGKZ|8525|diacylglycerol kinase, zeta##AK303322|DGKZ|8525|diacylglycerol kinase, zeta##AK123378|DGKZ|8525|diacylglycerol kinase, zeta##BX648433|DGKZ|8525|diacylglycerol kinase, zeta	0.0	
chr12	111862730	111862844	reg1032184.p1	4.226	+	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	-19038	+	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	-55877	-	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	-55941	-	AK126309 TSC_hg19_v1_chr12_-_111893987	31136	-	TSC_hg19_v1_chr12_-_112036257 AK095017	173488	-	TSC_hg19_v1_chr12_-_112036908 AK307803	174126	-	AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##AK095017|ATXN2|6311|ataxin 2##AK307803|ATXN2|6311|ataxin 2	0.346471	CTCF.p2:-101:0.346
chr1	7268084	7268186	reg1034560.p2	4.226	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-422644	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-506204	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-506253	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	563241	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	576274	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	576690	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.0	
chr18	64539635	64539742	reg1032170.p1	4.226	+	AJ007607 NM_021153 AK304000 AK315257 BC015877	-268377	-	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-1121486	+	TSC_hg19_v1_chr18_+_63417845 BC036786	-1121822	+	AK021849 TSC_hg19_v1_chr18_-_65182656	642895	-	TSC_hg19_v1_chr18_-_65183956 NM_032160	644258	-	AM393206 AM393295 CU689334 TSC_hg19_v1_chr18_-_66382307 AK307269 AK295551 BC032325 AL832341 AL832356 BC093792 BC093794 BC143400 AB058733	1842578	-	AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AK021849|DSEL|92126|dermatan sulfate epimerase-like##NM_032160|DSEL|92126|dermatan sulfate epimerase-like##AM393206|TMX3|54495|thioredoxin-related transmembrane protein 3##AM393295|TMX3|54495|thioredoxin-related transmembrane protein 3##AK307269|TMX3|54495|thioredoxin-related transmembrane protein 3##AK295551|TMX3|54495|thioredoxin-related transmembrane protein 3##BC032325|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832341|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832356|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093792|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093794|TMX3|54495|thioredoxin-related transmembrane protein 3##BC143400|TMX3|54495|thioredoxin-related transmembrane protein 3##AB058733|TMX3|54495|thioredoxin-related transmembrane protein 3	0.989806	CTCF.p2:36:0.990
chr19	13983552	13983658	reg1033365.p1	4.226	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	-36503	-	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-77360	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-98321	+	BC101209 BC101210 NM_001098622	4457	+	AK097431 NM_024323	33303	-	NM_017721 TSC_hg19_v1_chr19_+_14017006	33375	+	AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57##NM_017721|CC2D1A|54862|coiled-coil and C2 domain containing 1A	0.0	
chr2	192543428	192543497	reg1028154.p3	4.226	+	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	-600	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-433364	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-527155	-	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	168276	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	168509	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	515852	-	NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2	0.0	
chr3	8724548	8724728	reg1005891.p1	4.226	+	TSC_hg19_v1_chr3_-_8693765 AB024705 NM_015931 BC052614	-30884	-	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	-181057	+	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	-181123	+	AK291892 NM_001234 NM_033337 BC069368 AF036365 BC102033 BC102036 BC102037 Y14747 CU686780 AF043101	50887	+	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	86448	-	TSC_hg19_v1_chr3_-_8811300 NM_000916	86646	-	AB024705|C3orf32|51066|chromosome 3 open reading frame 32##NM_015931|C3orf32|51066|chromosome 3 open reading frame 32##BC052614|C3orf32|51066|chromosome 3 open reading frame 32##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK291892|CAV3|859|caveolin 3##NM_001234|CAV3|859|caveolin 3##NM_033337|CAV3|859|caveolin 3##BC069368|CAV3|859|caveolin 3##AF036365|CAV3|859|caveolin 3##BC102033|CAV3|859|caveolin 3##BC102036|CAV3|859|caveolin 3##BC102037|CAV3|859|caveolin 3##Y14747|CAV3|859|caveolin 3##AF043101|CAV3|859|caveolin 3##X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor##NM_000916|OXTR|5021|oxytocin receptor	0.740157	
chr6	118606009	118606126	reg1029251.p1	4.226	+	BC028615 NM_001029858 BC114925	-377377	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-609401	+	BC110325 TSC_hg19_v1_chr6_+_117996661 BC063794	-609406	+	NM_002667 M63603 AK311799 BC005269	263398	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	366969	-	BC110835 BC064835 NM_001178035	425166	-	BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC110325|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC063794|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like	0.047876	
chr6	14911016	14911129	reg1032961.p1	4.226	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-793050	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-793167	+	NM_001251901	-793586	+	TSC_hg19_v1_chr6_+_15245702 AK302624	334645	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	335340	+	BC033996 TSC_hg19_v1_chr6_-_15248900	337829	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.0	
chr8	81012702	81012853	reg1031617.p2	4.226	+	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-19748	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	-70275	-	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	-332780	-	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	70993	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	385707	+	AK131274 NM_001033723	774238	-	AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704	0.171172	
chr9	21709413	21709594	reg1010286.p1	4.226	+	AK124391 TSC_hg19_v1_chr9_-_21559834	-149721	-	AY358570 NM_176891	-227192	-	NM_024013 V00538 V00537 BC112300 BC112302 BC074928 BC074929 AB464595 CU686802 HQ258738 JN848523	-269024	+	TSC_hg19_v1_chr9_+_21802647 AF109294 AY712791 NM_002451 U22233 L40432 AK300592 AK309365	93137	+	BC026106 TSC_hg19_v1_chr9_+_21802660 BC012316 BC018625	93161	+	TSC_hg19_v1_chr9_+_21802691 CU693136 CR541670 CR541710	93214	+	AK124391|MIR31HG|554202|MIR31 host gene (non-protein coding)##AY358570|IFNE|338376|interferon, epsilon##NM_176891|IFNE|338376|interferon, epsilon##NM_024013|IFNA1|3439|interferon, alpha 1##V00538|IFNA1|3439|interferon, alpha 1##V00537|IFNA1|3439|interferon, alpha 1##BC112300|IFNA1|3439|interferon, alpha 1##BC112302|IFNA1|3439|interferon, alpha 1##BC074928|IFNA1|3439|interferon, alpha 1##BC074929|IFNA1|3439|interferon, alpha 1##HQ258738|IFNA1|3439|interferon, alpha 1##AF109294|MTAP|4507|methylthioadenosine phosphorylase##AY712791|MTAP|4507|methylthioadenosine phosphorylase##NM_002451|MTAP|4507|methylthioadenosine phosphorylase##U22233|MTAP|4507|methylthioadenosine phosphorylase##L40432|MTAP|4507|methylthioadenosine phosphorylase##AK300592|MTAP|4507|methylthioadenosine phosphorylase##AK309365|MTAP|4507|methylthioadenosine phosphorylase##BC026106|MTAP|4507|methylthioadenosine phosphorylase##BC012316|MTAP|4507|methylthioadenosine phosphorylase##BC018625|MTAP|4507|methylthioadenosine phosphorylase##CR541670|MTAP|4507|methylthioadenosine phosphorylase##CR541710|MTAP|4507|methylthioadenosine phosphorylase	0.0	
chr1	101701026	101701159	reg1024432.p1	4.225	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-209659	+	BC003660 TSC_hg19_v1_chr1_-_101491341 AK125485 BC053857 AF132964 AF157319 AF248965 AK298181 AK225469 AK225707 AK225951 AK289351 NM_001077394 NM_001077395 NM_015958 AF161492	-209753	-	TSC_hg19_v1_chr1_+_101361700 AF233345 AB463270 AF529197 AM392927 AY094606	-339339	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	1289	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	1478	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	761395	-	AK125485|DPH5|51611|DPH5 homolog (S. cerevisiae)##BC053857|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF132964|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF157319|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF248965|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK298181|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225469|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225707|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225951|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK289351|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_001077394|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_001077395|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_015958|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF161492|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF233345|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AF529197|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AM392927|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AY094606|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3	0.0	
chr13	50069993	50070107	reg1031589.p1	4.225	+	AK293242 NM_001040443	-278	+	BC047434 NM_001160308 AK307593	-44320	+	TSC_hg19_v1_chr13_+_50018555 AK308354	-51467	+	AB011031 TSC_hg19_v1_chr13_+_50070102 AK026228 AK300410 BC017212 AB527905 DQ891958 DQ895148	66	+	NM_001040444 AK225986	479	+	AL833821 TSC_hg19_v1_chr13_-_50159688 AJ319660 AF334406	89615	-	AK293242|PHF11|51131|PHD finger protein 11##NM_001040443|PHF11|51131|PHD finger protein 11##BC047434|SETDB2|83852|SET domain, bifurcated 2##NM_001160308|SETDB2|83852|SET domain, bifurcated 2##AK307593|SETDB2|83852|SET domain, bifurcated 2##AK308354|SETDB2|83852|SET domain, bifurcated 2##AB011031|PHF11|51131|PHD finger protein 11##AK026228|PHF11|51131|PHD finger protein 11##AK300410|PHF11|51131|PHD finger protein 11##BC017212|PHF11|51131|PHD finger protein 11##DQ891958|PHF11|51131|PHD finger protein 11##DQ895148|PHF11|51131|PHD finger protein 11##NM_001040444|PHF11|51131|PHD finger protein 11##AK225986|PHF11|51131|PHD finger protein 11##AL833821|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AJ319660|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1##AF334406|RCBTB1|55213|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1	0.0	
chr1	52607680	52607763	reg1031512.p1	4.225	+	AK027582 TSC_hg19_v1_chr1_+_52521975 BC022371 BC021004	-85723	+	BC070378 AK027750 TSC_hg19_v1_chr1_+_52521972	-85752	+	NM_001136497 NM_001243767 NM_152265 TSC_hg19_v1_chr1_+_52521942	-85821	+	AF130419 AF130420 NM_004799 NM_007323 NM_007324	324	+	TSC_hg19_v1_chr1_-_52831829 BC039308 AK130874 NM_032449	224125	-	BC011539 AK303420 U43416 AK291909 U40152 TSC_hg19_v1_chr1_-_52870133 NM_001190818 NM_001190819 NM_004153	262379	-	AK027582|BTF3L4|91408|basic transcription factor 3-like 4##BC022371|BTF3L4|91408|basic transcription factor 3-like 4##BC021004|BTF3L4|91408|basic transcription factor 3-like 4##BC070378|BTF3L4|91408|basic transcription factor 3-like 4##AK027750|BTF3L4|91408|basic transcription factor 3-like 4##NM_001136497|BTF3L4|91408|basic transcription factor 3-like 4##NM_001243767|BTF3L4|91408|basic transcription factor 3-like 4##NM_152265|BTF3L4|91408|basic transcription factor 3-like 4##AF130419|ZFYVE9|9372|zinc finger, FYVE domain containing 9##AF130420|ZFYVE9|9372|zinc finger, FYVE domain containing 9##NM_004799|ZFYVE9|9372|zinc finger, FYVE domain containing 9##NM_007323|ZFYVE9|9372|zinc finger, FYVE domain containing 9##NM_007324|ZFYVE9|9372|zinc finger, FYVE domain containing 9##BC039308|CC2D1B|200014|coiled-coil and C2 domain containing 1B##AK130874|CC2D1B|200014|coiled-coil and C2 domain containing 1B##NM_032449|CC2D1B|200014|coiled-coil and C2 domain containing 1B##BC011539|ORC1|4998|origin recognition complex, subunit 1##AK303420|ORC1|4998|origin recognition complex, subunit 1##U43416|ORC1|4998|origin recognition complex, subunit 1##AK291909|ORC1|4998|origin recognition complex, subunit 1##U40152|ORC1|4998|origin recognition complex, subunit 1##NM_001190818|ORC1|4998|origin recognition complex, subunit 1##NM_001190819|ORC1|4998|origin recognition complex, subunit 1##NM_004153|ORC1|4998|origin recognition complex, subunit 1	0.0	
chr19	47232007	47232085	reg1005945.p1	4.225	+	TSC_hg19_v1_chr19_-_47220370 AK300339 AK095884 NM_001079880 NM_001079881 NM_016457	-11664	-	NM_001079882	-14470	-	BC015472 TSC_hg19_v1_chr19_-_47197232	-34847	-	NM_001039885 NM_024301 TSC_hg19_v1_chr19_+_47249314 AK095497 AJ314847 AK022638 AK291282	17263	+	BC014278 AB209003 TSC_hg19_v1_chr19_-_47249674	17609	-	TSC_hg19_v1_chr19_-_47249688 AF212940 AB527410 BC034604	17648	-	AK300339|PRKD2|25865|protein kinase D2##AK095884|PRKD2|25865|protein kinase D2##NM_001079880|PRKD2|25865|protein kinase D2##NM_001079881|PRKD2|25865|protein kinase D2##NM_016457|PRKD2|25865|protein kinase D2##NM_001079882|PRKD2|25865|protein kinase D2##BC015472|PRKD2|25865|protein kinase D2##NM_001039885|FKRP|79147|fukutin related protein##NM_024301|FKRP|79147|fukutin related protein##AK095497|FKRP|79147|fukutin related protein##AJ314847|FKRP|79147|fukutin related protein##AK022638|FKRP|79147|fukutin related protein##AK291282|FKRP|79147|fukutin related protein##BC014278|STRN4|29888|striatin, calmodulin binding protein 4##AB209003|STRN4|29888|striatin, calmodulin binding protein 4##AF212940|STRN4|29888|striatin, calmodulin binding protein 4##BC034604|STRN4|29888|striatin, calmodulin binding protein 4	0.0	
chr21	37914149	37914329	reg1005088.p1	4.225	+	AF314090 AY355348 NM_001146079 NM_144492	-61852	-	BC012126 NM_012130 AY355349	-75508	-	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	-156549	+	AJ566765 NM_001146078	658	-	AJ566766 NM_001146077	34627	-	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	157201	+	AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AJ566765|CLDN14|23562|claudin 14##NM_001146078|CLDN14|23562|claudin 14##AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14	0.0	
chr3	156393371	156393495	reg1000590.p5	4.225	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-18	+	CR749647 NM_001184717	-719	+	AK291261 TSC_hg19_v1_chr3_+_156392402 BX537965 BC050350	-1031	+	BC034397 NM_001184718	1019	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	150678	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	484476	-	AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##CR749647|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184717|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1	0.112869	
chr11	74982210	74982299	reg1032620.p2	4.224	+	NM_001195528	-30305	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	-111413	+	NM_001145212 NM_007256 FM209050 TSC_hg19_v1_chr11_+_74862151 AK304783 AK302492 AK290234 AK300134 AB020687 BC127254 BC041095 AB026256 AL117465	-120110	+	AF084040 AF084940 FJ348262 CU678548 AB462955 TSC_hg19_v1_chr11_-_75062708 AK289718 BC003636 NM_004041 NM_020251	80562	-	TSC_hg19_v1_chr11_+_75110562 D28344 AK130960 BC034149 NM_001005 AK129794 AK313051 BC013231 BC100284 X55715 BC071917 AK223048 BC003137 BC071669 S42658 AB464166 CU678394 DQ892888 DQ896136 U14990 U14991 U14992 BC003577 BC013196 AB062288	128321	+	HQ258227 BC132708 BC132710 TSC_hg19_v1_chr11_-_75141083 AK091109 AX746783	158806	-	NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145212|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_007256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209050|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK304783|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK302492|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK290234|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK300134|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB020687|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC127254|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC041095|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB026256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AL117465|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF084040|ARRB1|408|arrestin, beta 1##AF084940|ARRB1|408|arrestin, beta 1##FJ348262|ARRB1|408|arrestin, beta 1##AK289718|ARRB1|408|arrestin, beta 1##BC003636|ARRB1|408|arrestin, beta 1##NM_004041|ARRB1|408|arrestin, beta 1##NM_020251|ARRB1|408|arrestin, beta 1##D28344|RPS3|6188|ribosomal protein S3##AK130960|RPS3|6188|ribosomal protein S3##BC034149|RPS3|6188|ribosomal protein S3##NM_001005|RPS3|6188|ribosomal protein S3##AK129794|RPS3|6188|ribosomal protein S3##AK313051|RPS3|6188|ribosomal protein S3##BC013231|RPS3|6188|ribosomal protein S3##BC100284|RPS3|6188|ribosomal protein S3##X55715|RPS3|6188|ribosomal protein S3##BC071917|RPS3|6188|ribosomal protein S3##AK223048|RPS3|6188|ribosomal protein S3##BC003137|RPS3|6188|ribosomal protein S3##BC071669|RPS3|6188|ribosomal protein S3##S42658|RPS3|6188|ribosomal protein S3##DQ892888|RPS3|6188|ribosomal protein S3##DQ896136|RPS3|6188|ribosomal protein S3##U14990|RPS3|6188|ribosomal protein S3##U14991|RPS3|6188|ribosomal protein S3##U14992|RPS3|6188|ribosomal protein S3##BC003577|RPS3|6188|ribosomal protein S3##BC013196|RPS3|6188|ribosomal protein S3##AB062288|RPS3|6188|ribosomal protein S3##HQ258227|KLHL35|283212|kelch-like 35 (Drosophila)##BC132708|KLHL35|283212|kelch-like 35 (Drosophila)##BC132710|KLHL35|283212|kelch-like 35 (Drosophila)##AK091109|KLHL35|283212|kelch-like 35 (Drosophila)	0.974491	CTCF.p2:-1:0.974
chr1	230446271	230446451	reg1005304.p1	4.224	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-243365	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-243419	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-684347	+	BC150638 NM_024554	67029	-	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	331835	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	331872	+	AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2	0.0	
chr15	79296835	79297016	reg1025941.p1	4.224	+	TSC_hg19_v1_chr15_-_79237389 AL110099 BC002479 BC018821 AK309491 AK314698 D28436 AK130158 NM_004390	-59526	-	TSC_hg19_v1_chr15_-_79237350 AF426247 AF426248 CR456881 CU677980 DQ890683 DQ893772 AK295583 X16832	-59590	-	TSC_hg19_v1_chr15_+_79165343 AK300789 BC067826 AB385578 CU692730 DQ892602 DQ895837 AK310181	-131562	+	NM_153815 S62035	1076	-	L26584 CU691844 AB385192 TSC_hg19_v1_chr15_-_79382954	85974	-	AK290135 TSC_hg19_v1_chr15_-_79383114 BC040275 NM_001145648 NM_002891	86223	-	AL110099|CTSH|1512|cathepsin H##BC002479|CTSH|1512|cathepsin H##BC018821|CTSH|1512|cathepsin H##AK309491|CTSH|1512|cathepsin H##AK314698|CTSH|1512|cathepsin H##D28436|CTSH|1512|cathepsin H##AK130158|CTSH|1512|cathepsin H##NM_004390|CTSH|1512|cathepsin H##AF426247|CTSH|1512|cathepsin H##AF426248|CTSH|1512|cathepsin H##CR456881|CTSH|1512|cathepsin H##DQ890683|CTSH|1512|cathepsin H##DQ893772|CTSH|1512|cathepsin H##X16832|CTSH|1512|cathepsin H##AK300789|MORF4L1|10933|mortality factor 4 like 1##BC067826|MORF4L1|10933|mortality factor 4 like 1##DQ892602|MORF4L1|10933|mortality factor 4 like 1##DQ895837|MORF4L1|10933|mortality factor 4 like 1##AK310181|MORF4L1|10933|mortality factor 4 like 1##NM_153815|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##S62035|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##L26584|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK290135|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##BC040275|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_001145648|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_002891|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1	0.0	
chr2	109341558	109341688	reg1034942.p1	4.224	+	TSC_hg19_v1_chr2_+_109335970 D42063 NM_006267	-5685	+	TSC_hg19_v1_chr2_+_109271492 AK302411 AK312178	-70135	+	AF527759 NM_001193485	-70356	+	TSC_hg19_v1_chr2_+_109384621 AY170822	43060	+	TSC_hg19_v1_chr2_+_109403228 BC050579 AK125199 AK057307 NM_144978 BC015847 BC038421	61579	+	TSC_hg19_v1_chr2_-_109605623 AK296936	263996	-	D42063|RANBP2|5903|RAN binding protein 2##NM_006267|RANBP2|5903|RAN binding protein 2##AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3##AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AY170822|RANBP2|5903|RAN binding protein 2##BC050579|CCDC138|165055|coiled-coil domain containing 138##AK125199|CCDC138|165055|coiled-coil domain containing 138##AK057307|CCDC138|165055|coiled-coil domain containing 138##NM_144978|CCDC138|165055|coiled-coil domain containing 138##BC015847|CCDC138|165055|coiled-coil domain containing 138##BC038421|CCDC138|165055|coiled-coil domain containing 138##AK296936|EDAR|10913|ectodysplasin A receptor	0.578776	CTCF.p2:6:0.579
chr2	132093034	132093133	reg1031507.p1	4.224	+	AY462868 AY462871 AY462872 AY462873 NM_001083538 AB464428	-117134	+	TSC_hg19_v1_chr2_+_131862905 AK000790 AK223338 AK293880 AK296008 BC050695 BC001428 BC013991	-230174	+	TSC_hg19_v1_chr2_+_131862874 AK302770	-230212	+	NM_001077637	28647	-	NM_080386 AK093116 AX747933 AK292253 BC057810	140553	+	BC063024 TSC_hg19_v1_chr2_-_132249961 BC018206	156873	-	AY462868|POTEE|445582|POTE ankyrin domain family, member E##AY462871|POTEE|445582|POTE ankyrin domain family, member E##AY462872|POTEE|445582|POTE ankyrin domain family, member E##AY462873|POTEE|445582|POTE ankyrin domain family, member E##NM_001083538|POTEE|445582|POTE ankyrin domain family, member E##AK000790|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK223338|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK293880|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK296008|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##BC050695|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##BC001428|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##BC013991|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##AK302770|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_001077637|WTH3DI|150786|RAB6C-like##NM_080386|TUBA3D|113457|tubulin, alpha 3d##AK093116|TUBA3D|113457|tubulin, alpha 3d##AK292253|TUBA3D|113457|tubulin, alpha 3d##BC057810|TUBA3D|113457|tubulin, alpha 3d##BC063024|MZT2A|653784|mitotic spindle organizing protein 2A##BC018206|MZT2A|653784|mitotic spindle organizing protein 2A	0.443221	CTCF.p2:22:0.443
chr2	166731017	166731089	reg1013507.p1	4.224	+	TSC_hg19_v1_chr2_-_166650773 NM_004482	-80267	-	BC056246 TSC_hg19_v1_chr2_-_166650713	-80326	-	AK313389 TSC_hg19_v1_chr2_-_166650651	-80448	-	AB073395 TSC_hg19_v1_chr2_-_166810287 AK057268 AK292942 BC055424 NM_024753	79248	-	AB093548 AB093549 AB098335 AY043484 AF225985 NM_001165963 NM_001165964 NM_006920 EU368119	199101	-	EU368117 NM_001202435 DQ993522	274660	-	NM_004482|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##BC056246|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##AK313389|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)##AB073395|TTC21B|79809|tetratricopeptide repeat domain 21B##AK057268|TTC21B|79809|tetratricopeptide repeat domain 21B##AK292942|TTC21B|79809|tetratricopeptide repeat domain 21B##BC055424|TTC21B|79809|tetratricopeptide repeat domain 21B##NM_024753|TTC21B|79809|tetratricopeptide repeat domain 21B##AB093548|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB093549|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AB098335|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AY043484|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##AF225985|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001165963|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001165964|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_006920|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##EU368119|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##EU368117|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit##NM_001202435|SCN1A|6323|sodium channel, voltage-gated, type I, alpha subunit	0.657809	
chr2	201064809	201064942	reg1028995.p1	4.224	+	TSC_hg19_v1_chr2_+_200820507 BC017959 CU676122	-244359	+	BX647677 NM_001039693	-244417	-	TSC_hg19_v1_chr2_-_200820204 HQ258367 AK298977 BC025758 AK095272 BC132835 BC136837 BC144420 BX648265 AK293064	-244663	-	NM_015535 AK290496	105734	+	AL110124 AY450394 AK090867 TSC_hg19_v1_chr2_+_201171276 NM_001100422 NM_001100424 AK002064 AK090703 AK314561 BC010848 BC018736 NM_001100423	106224	+	TSC_hg19_v1_chr2_+_201171424 AF193059 BC065817	106574	+	BC017959|C2orf47|79568|chromosome 2 open reading frame 47##BX647677|TYW5|129450|tRNA-yW synthesizing protein 5##NM_001039693|TYW5|129450|tRNA-yW synthesizing protein 5##HQ258367|TYW5|129450|tRNA-yW synthesizing protein 5##AK298977|TYW5|129450|tRNA-yW synthesizing protein 5##BC025758|TYW5|129450|tRNA-yW synthesizing protein 5##AK095272|TYW5|129450|tRNA-yW synthesizing protein 5##BC132835|TYW5|129450|tRNA-yW synthesizing protein 5##BC136837|TYW5|129450|tRNA-yW synthesizing protein 5##BC144420|TYW5|129450|tRNA-yW synthesizing protein 5##BX648265|TYW5|129450|tRNA-yW synthesizing protein 5##AK293064|TYW5|129450|tRNA-yW synthesizing protein 5##NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AF193059|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC065817|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	0.807485	CTCF.p2:-22:0.807
chr3	170529725	170529887	reg1005427.p1	4.224	+	TSC_hg19_v1_chr3_-_170303774 AK122655 NM_020949	-225988	-	AK098766 NM_001185056 AK294087	-390765	+	NM_005602 TSC_hg19_v1_chr3_+_170136652 AK294108 AK312923 BC013577	-393148	+	TSC_hg19_v1_chr3_-_170587985 BC107708 AL110170 BC062731 NM_001099645	58189	-	TSC_hg19_v1_chr3_-_170626397 AK311962 BC036072	96585	-	AY205258 AY205259 AY205260 AY205261 NM_020390 TSC_hg19_v1_chr3_-_170626427	96653	-	AK122655|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_020949|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_001185056|CLDN11|5010|claudin 11##AK294087|CLDN11|5010|claudin 11##NM_005602|CLDN11|5010|claudin 11##AK312923|CLDN11|5010|claudin 11##BC013577|CLDN11|5010|claudin 11##BC107708|RPL22L1|200916|ribosomal protein L22-like 1##AL110170|RPL22L1|200916|ribosomal protein L22-like 1##BC062731|RPL22L1|200916|ribosomal protein L22-like 1##NM_001099645|RPL22L1|200916|ribosomal protein L22-like 1##AK311962|EIF5A2|56648|eukaryotic translation initiation factor 5A2##BC036072|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205258|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205259|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205260|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205261|EIF5A2|56648|eukaryotic translation initiation factor 5A2##NM_020390|EIF5A2|56648|eukaryotic translation initiation factor 5A2	0.0	
chr3	25635709	25635805	reg1031359.p2	4.224	+	TSC_hg19_v1_chr3_+_25470068 BC060794 AK292032 AB590663 CU687428 AB307688 HQ692864	-165613	+	BC030234 NM_000965 TSC_hg19_v1_chr3_+_25469854 X07282 Y00291	-165890	+	TSC_hg19_v1_chr3_+_25469751 AF157483 NM_016152	-165998	+	TSC_hg19_v1_chr3_-_25679768 M27504	43957	-	AB208879 TSC_hg19_v1_chr3_-_25683850	48081	-	TSC_hg19_v1_chr3_-_25706085 NM_001068 X68060 Z15111	70218	-	BC060794|RARB|5915|retinoic acid receptor, beta##AK292032|RARB|5915|retinoic acid receptor, beta##AB307688|RARB|5915|retinoic acid receptor, beta##HQ692864|RARB|5915|retinoic acid receptor, beta##BC030234|RARB|5915|retinoic acid receptor, beta##NM_000965|RARB|5915|retinoic acid receptor, beta##X07282|RARB|5915|retinoic acid receptor, beta##Y00291|RARB|5915|retinoic acid receptor, beta##AF157483|RARB|5915|retinoic acid receptor, beta##NM_016152|RARB|5915|retinoic acid receptor, beta##M27504|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##AB208879|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##NM_001068|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##X68060|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##Z15111|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	0.980576	CTCF.p2:-1:0.981
chr3	71561304	71561411	reg1032178.p1	4.224	+	TSC_hg19_v1_chr3_-_71542628 AF146696 BC054505	-18690	-	AK092383 AX747510 NM_001244812	-207447	-	TSC_hg19_v1_chr3_-_71294229 AK074321 NM_001244814	-267085	-	AF250920 NM_001244816	31350	-	TSC_hg19_v1_chr3_-_71632874 AK122710 NM_001244808 BC005055 BC054815 BC071893 BC080521 BC068481 NM_001012505 NM_001244810 NM_032682	71621	-	AK126999 TSC_hg19_v1_chr3_-_71774554 NM_001134651	213147	-	AF146696|FOXP1|27086|forkhead box P1##BC054505|FOXP1|27086|forkhead box P1##AK092383|FOXP1|27086|forkhead box P1##NM_001244812|FOXP1|27086|forkhead box P1##AK074321|FOXP1|27086|forkhead box P1##NM_001244814|FOXP1|27086|forkhead box P1##AF250920|FOXP1|27086|forkhead box P1##NM_001244816|FOXP1|27086|forkhead box P1##AK122710|FOXP1|27086|forkhead box P1##NM_001244808|FOXP1|27086|forkhead box P1##BC005055|FOXP1|27086|forkhead box P1##BC054815|FOXP1|27086|forkhead box P1##BC071893|FOXP1|27086|forkhead box P1##BC080521|FOXP1|27086|forkhead box P1##BC068481|FOXP1|27086|forkhead box P1##NM_001012505|FOXP1|27086|forkhead box P1##NM_001244810|FOXP1|27086|forkhead box P1##NM_032682|FOXP1|27086|forkhead box P1##AK126999|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134651|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3	0.028719	
chr6	151969281	151969365	reg1033384.p1	4.224	+	NM_025059 BC060803 BC035003 AK225330 AK026958	-154105	+	AK298490 TSC_hg19_v1_chr6_+_151773653 AK310840 AL110241 BC011348 CU679902	-195681	+	AK022972 NM_024573	-195902	+	NM_001122742 U68068 AK309580 AB588629 AB588630	42370	+	NM_001122741 AK293019 AK313644	157500	+	NM_001122740 U68067	159130	+	NM_025059|C6orf97|80129|chromosome 6 open reading frame 97##BC060803|C6orf97|80129|chromosome 6 open reading frame 97##BC035003|C6orf97|80129|chromosome 6 open reading frame 97##AK225330|C6orf97|80129|chromosome 6 open reading frame 97##AK026958|C6orf97|80129|chromosome 6 open reading frame 97##AK298490|C6orf211|79624|chromosome 6 open reading frame 211##AK310840|C6orf211|79624|chromosome 6 open reading frame 211##AL110241|C6orf211|79624|chromosome 6 open reading frame 211##BC011348|C6orf211|79624|chromosome 6 open reading frame 211##AK022972|C6orf211|79624|chromosome 6 open reading frame 211##NM_024573|C6orf211|79624|chromosome 6 open reading frame 211##NM_001122742|ESR1|2099|estrogen receptor 1##U68068|ESR1|2099|estrogen receptor 1##AK309580|ESR1|2099|estrogen receptor 1##AB588629|ESR1|2099|estrogen receptor 1##AB588630|ESR1|2099|estrogen receptor 1##NM_001122741|ESR1|2099|estrogen receptor 1##AK293019|ESR1|2099|estrogen receptor 1##AK313644|ESR1|2099|estrogen receptor 1##NM_001122740|ESR1|2099|estrogen receptor 1##U68067|ESR1|2099|estrogen receptor 1	0.411776	CTCF.p2:-8:0.412
chr6	32821871	32821975	reg1034145.p2	4.224	+	TSC_hg19_v1_chr6_-_32821799 BC014081 NM_000593 BX648013 AK313762	-152	-	AB528393 DQ896350 EU176425 AY523970 AY523971 TSC_hg19_v1_chr6_-_32821618 X57522	-316	-	AB012644 L21204 L21205 L21206 L21207 L21208 TSC_hg19_v1_chr6_-_32821513	-450	-	BX641100 AK303118 NM_002800 TSC_hg19_v1_chr6_+_32821968 BC008795 BC018885 BC065513 X62741 S75169 U01025 AB528725 CR541656 CU688056	42	+	AK057104 TSC_hg19_v1_chr6_+_32862536	40641	+	CR407606 AB590298 DQ891141 DQ894320 CU693252 BC027175 Z23139 AB209577 AK301017 AK315979 TSC_hg19_v1_chr6_-_32908806 AK295872 AY645722 U15085 NM_002118	86791	-	BC014081|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##NM_000593|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##BX648013|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##AK313762|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##DQ896350|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##EU176425|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##AY523970|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##AY523971|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##X57522|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##AB012644|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##L21204|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##L21205|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##L21206|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##L21207|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##L21208|TAP1|6890|transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)##BX641100|PSMB9|5698|proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)##AK303118|PSMB9|5698|proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)##NM_002800|PSMB9|5698|proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)##BC065513|PSMB9|5698|proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)##X62741|PSMB9|5698|proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)##S75169|PSMB9|5698|proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)##U01025|PSMB9|5698|proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)##CR541656|PSMB9|5698|proteasome (prosome, macropain) subunit, beta type, 9 (large multifunctional peptidase 2)##AK057104|LOC100294145|100294145|uncharacterized LOC100294145##CR407606|HLA-DMB|3109|major histocompatibility complex, class II, DM beta##DQ891141|HLA-DMB|3109|major histocompatibility complex, class II, DM beta##DQ894320|HLA-DMB|3109|major histocompatibility complex, class II, DM beta##BC027175|HLA-DMB|3109|major histocompatibility complex, class II, DM beta##Z23139|HLA-DMB|3109|major histocompatibility complex, class II, DM beta##AB209577|HLA-DMB|3109|major histocompatibility complex, class II, DM beta##AK315979|HLA-DMB|3109|major histocompatibility complex, class II, DM beta##AK295872|HLA-DMB|3109|major histocompatibility complex, class II, DM beta##AY645722|HLA-DMB|3109|major histocompatibility complex, class II, DM beta##U15085|HLA-DMB|3109|major histocompatibility complex, class II, DM beta##NM_002118|HLA-DMB|3109|major histocompatibility complex, class II, DM beta	0.08447	
chr8	82645088	82645199	reg1038954.p1	4.224	+	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-384	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-11617	-	AY825924 NM_001010893 BC136625 BC136631	-37897	-	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	109330	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	2450316	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	2450400	+	BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##AY825924|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##NM_001010893|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136625|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136631|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like	0.0	
chrX	96998146	96998231	reg1026452.p2	4.224	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	-859218	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	-1058234	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	-1058437	+	EF676096 NM_001105243 NM_001184880 NM_020766 TSC_hg19_v1_chrX_-_99665272	2667085	-	NM_022144 AF191770 BC034030 AF291656 AF234259 AY358706 AB055421 AB590911 CU689814	2841713	+	BT006977 CR457115 AB527646 DQ890668 DQ893849 TSC_hg19_v1_chrX_-_99891804 AF053453 AK299176 AF133426 AK309581 AY358825 AB097016 AF043906 U84895 BC012389 NM_003270 AK075072 AB209876 AK315773 AK300852	2893580	-	NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##EF676096|PCDH19|57526|protocadherin 19##NM_001105243|PCDH19|57526|protocadherin 19##NM_001184880|PCDH19|57526|protocadherin 19##NM_020766|PCDH19|57526|protocadherin 19##NM_022144|TNMD|64102|tenomodulin##AF191770|TNMD|64102|tenomodulin##BC034030|TNMD|64102|tenomodulin##AF291656|TNMD|64102|tenomodulin##AF234259|TNMD|64102|tenomodulin##AY358706|TNMD|64102|tenomodulin##AB055421|TNMD|64102|tenomodulin##BT006977|TSPAN6|7105|tetraspanin 6##CR457115|TSPAN6|7105|tetraspanin 6##DQ890668|TSPAN6|7105|tetraspanin 6##DQ893849|TSPAN6|7105|tetraspanin 6##AF053453|TSPAN6|7105|tetraspanin 6##AK299176|TSPAN6|7105|tetraspanin 6##AF133426|TSPAN6|7105|tetraspanin 6##AK309581|TSPAN6|7105|tetraspanin 6##AY358825|TSPAN6|7105|tetraspanin 6##AB097016|TSPAN6|7105|tetraspanin 6##AF043906|TSPAN6|7105|tetraspanin 6##U84895|TSPAN6|7105|tetraspanin 6##BC012389|TSPAN6|7105|tetraspanin 6##NM_003270|TSPAN6|7105|tetraspanin 6##AK075072|TSPAN6|7105|tetraspanin 6##AB209876|TSPAN6|7105|tetraspanin 6##AK315773|TSPAN6|7105|tetraspanin 6##AK300852|TSPAN6|7105|tetraspanin 6	0.963373	CTCF.p2:6:0.963
chr14	68973438	68973617	reg1030513.p1	4.223	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-687007	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-690228	-	AK315462 NM_152443	-804925	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	286193	-	NM_001244698 NM_004926	287103	-	NM_001244701 AB528867	289457	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr17	75426102	75426189	reg1002690.p1	4.223	+	AB023208 NM_001113494 AJ312322	-53976	+	TSC_hg19_v1_chr17_+_75369418 AK304143	-56720	+	TSC_hg19_v1_chr17_+_75369236 AJ312319 NM_001113493	-56892	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	20500	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	20637	+	AK299828 TSC_hg19_v1_chr17_+_75447450	21244	+	AB023208|SEPT9|10801|septin 9##NM_001113494|SEPT9|10801|septin 9##AJ312322|SEPT9|10801|septin 9##AK304143|SEPT9|10801|septin 9##AJ312319|SEPT9|10801|septin 9##NM_001113493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9	0.366527	CTCF.p2:33:0.367
chr2	65292219	65292400	reg1006395.p2	4.223	+	TSC_hg19_v1_chr2_+_65283579 AB011154 NM_015147 AK093846 AK000856 AK299373 AK304110 AK301173 AK098786 BX648774 BC030534 BC002982 BC004873	-8749	+	TSC_hg19_v1_chr2_+_65216532 AK223486 AK313052 BC072423 BC026216 L14595 L19444 AB026689 DQ891127 DQ894306	-75659	+	TSC_hg19_v1_chr2_+_65216485 AK298472 AK315986 NM_003038	-75818	+	AF498929 BT019528 BT019529 CR533479 CR536488 AB464118 AB590355 AM392684 CU674450 DQ894084 EU831590 EU831675 TSC_hg19_v1_chr2_-_65357083 M28209	64766	-	TSC_hg19_v1_chr2_-_65357236 BC000905 BX571747 AL050268 AK303678 AK055927 AK315495	64910	-	TSC_hg19_v1_chr2_-_65357263 NM_004161 NM_015543	65032	-	AB011154|CEP68|23177|centrosomal protein 68kDa##NM_015147|CEP68|23177|centrosomal protein 68kDa##AK093846|CEP68|23177|centrosomal protein 68kDa##AK000856|CEP68|23177|centrosomal protein 68kDa##AK299373|CEP68|23177|centrosomal protein 68kDa##AK304110|CEP68|23177|centrosomal protein 68kDa##AK301173|CEP68|23177|centrosomal protein 68kDa##AK098786|CEP68|23177|centrosomal protein 68kDa##BX648774|CEP68|23177|centrosomal protein 68kDa##BC030534|CEP68|23177|centrosomal protein 68kDa##BC002982|CEP68|23177|centrosomal protein 68kDa##BC004873|CEP68|23177|centrosomal protein 68kDa##AK223486|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK313052|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC072423|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC026216|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L14595|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L19444|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AB026689|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ891127|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ894306|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AF498929|RAB1A|5861|RAB1A, member RAS oncogene family##BT019528|RAB1A|5861|RAB1A, member RAS oncogene family##BT019529|RAB1A|5861|RAB1A, member RAS oncogene family##CR533479|RAB1A|5861|RAB1A, member RAS oncogene family##CR536488|RAB1A|5861|RAB1A, member RAS oncogene family##AM392684|RAB1A|5861|RAB1A, member RAS oncogene family##DQ894084|RAB1A|5861|RAB1A, member RAS oncogene family##EU831590|RAB1A|5861|RAB1A, member RAS oncogene family##EU831675|RAB1A|5861|RAB1A, member RAS oncogene family##M28209|RAB1A|5861|RAB1A, member RAS oncogene family##BC000905|RAB1A|5861|RAB1A, member RAS oncogene family##BX571747|RAB1A|5861|RAB1A, member RAS oncogene family##AL050268|RAB1A|5861|RAB1A, member RAS oncogene family##AK303678|RAB1A|5861|RAB1A, member RAS oncogene family##AK055927|RAB1A|5861|RAB1A, member RAS oncogene family##AK315495|RAB1A|5861|RAB1A, member RAS oncogene family##NM_004161|RAB1A|5861|RAB1A, member RAS oncogene family##NM_015543|RAB1A|5861|RAB1A, member RAS oncogene family	0.0	
chr6	158185797	158185977	reg1027678.p3	4.223	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-383348	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-440670	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-441303	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	58402	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	58487	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	217000	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.0	
chr10	106823696	106823835	reg1032437.p1	4.222	+	BC117417 TSC_hg19_v1_chr10_+_106401047	-422720	+	AB028982 NM_014978	-422907	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-710224	+	TSC_hg19_v1_chr10_-_108459000 AK123752	1635294	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	2100611	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	4859444	-	BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.469636	CTCF.p2:-12:0.470
chr1	159880342	159880506	reg1032089.p1	4.222	+	BC089391 BC027874 NM_012337 BC064386 AF094758 AK308262 AK225566 AK225582 AK292249	-10499	-	HQ258612 BC132893 BC132895 NM_001013661	-48046	-	AK096506 NM_001134233	-55288	-	BC009357 TSC_hg19_v1_chr1_-_159895269	14841	-	TSC_hg19_v1_chr1_-_159895294 BC002616 D21261 GU727636 NM_003564 AK291562 AK298654	14863	-	TSC_hg19_v1_chr1_-_159915401 AB037776 BC030141 NM_001135050 NM_020789 AY358128	34970	-	BC089391|CCDC19|25790|coiled-coil domain containing 19##BC027874|CCDC19|25790|coiled-coil domain containing 19##NM_012337|CCDC19|25790|coiled-coil domain containing 19##BC064386|CCDC19|25790|coiled-coil domain containing 19##AF094758|CCDC19|25790|coiled-coil domain containing 19##AK308262|CCDC19|25790|coiled-coil domain containing 19##AK225566|CCDC19|25790|coiled-coil domain containing 19##AK225582|CCDC19|25790|coiled-coil domain containing 19##AK292249|CCDC19|25790|coiled-coil domain containing 19##HQ258612|VSIG8|391123|V-set and immunoglobulin domain containing 8##BC132893|VSIG8|391123|V-set and immunoglobulin domain containing 8##BC132895|VSIG8|391123|V-set and immunoglobulin domain containing 8##NM_001013661|VSIG8|391123|V-set and immunoglobulin domain containing 8##AK096506|C1orf204|284677|chromosome 1 open reading frame 204##NM_001134233|C1orf204|284677|chromosome 1 open reading frame 204##BC009357|TAGLN2|8407|transgelin 2##BC002616|TAGLN2|8407|transgelin 2##D21261|TAGLN2|8407|transgelin 2##GU727636|TAGLN2|8407|transgelin 2##NM_003564|TAGLN2|8407|transgelin 2##AK291562|TAGLN2|8407|transgelin 2##AK298654|TAGLN2|8407|transgelin 2##AB037776|IGSF9|57549|immunoglobulin superfamily, member 9##BC030141|IGSF9|57549|immunoglobulin superfamily, member 9##NM_001135050|IGSF9|57549|immunoglobulin superfamily, member 9##NM_020789|IGSF9|57549|immunoglobulin superfamily, member 9##AY358128|IGSF9|57549|immunoglobulin superfamily, member 9	0.0	
chr13	99136756	99136869	reg1032969.p1	4.222	+	TSC_hg19_v1_chr13_+_99058147 AF339817	-78606	+	AB464689 EU446571 AF539427 BC025388 BC017585 NM_178861	-307307	-	TSC_hg19_v1_chr13_+_98795717 AB008430 BC065020	-341094	+	AF083420 NM_003576	37483	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	92242	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	92310	-	EU446571|RNF113B|140432|ring finger protein 113B##AF539427|RNF113B|140432|ring finger protein 113B##BC025388|RNF113B|140432|ring finger protein 113B##BC017585|RNF113B|140432|ring finger protein 113B##NM_178861|RNF113B|140432|ring finger protein 113B##AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##AF083420|STK24|8428|serine/threonine kinase 24##NM_003576|STK24|8428|serine/threonine kinase 24##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24	0.012434	
chr16	50406179	50406297	reg1034696.p2	4.222	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	-3408	-	NM_001114 D25538	-84415	+	TSC_hg19_v1_chr16_+_50308041 BC039891	-98185	+	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	176088	+	TSC_hg19_v1_chr16_-_50647562 AK124375	241340	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	308939	-	AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20	0.063864	
chr20	33590050	33590181	reg1032920.p1	4.222	+	NM_020884	-46412	+	TSC_hg19_v1_chr20_-_33543587 AK311421 AK312492 BC007927 NM_000178	-46524	-	TSC_hg19_v1_chr20_-_33543562 AK293144 L42531 U34683 AK311567	-46551	-	TSC_hg19_v1_chr20_-_33680592 AB590540 CU680522 BC013144	90357	-	TSC_hg19_v1_chr20_-_33680600 AK074106	90481	-	TSC_hg19_v1_chr20_-_33680611 AK298958 AK303476 AK315582 NM_015638 NM_199368	90525	-	NM_020884|MYH7B|57644|myosin, heavy chain 7B, cardiac muscle, beta##AK311421|GSS|2937|glutathione synthetase##AK312492|GSS|2937|glutathione synthetase##BC007927|GSS|2937|glutathione synthetase##NM_000178|GSS|2937|glutathione synthetase##AK293144|GSS|2937|glutathione synthetase##U34683|GSS|2937|glutathione synthetase##AK311567|GSS|2937|glutathione synthetase##BC013144|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK074106|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK298958|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK303476|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##AK315582|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##NM_015638|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein##NM_199368|TRPC4AP|26133|transient receptor potential cation channel, subfamily C, member 4 associated protein	0.263418	CTCF.p2:-29:0.263
chr15	68124443	68124534	reg1033322.p1	4.221	+	NM_001031807	-6548	+	AK293459 NM_001206804	-283147	+	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	-289466	+	AF167160 NM_016166 BC118587 BC121797 TSC_hg19_v1_chr15_+_68346652 AK314515 BC104646	222124	+	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	222173	+	TSC_hg19_v1_chr15_-_68497633 BX640702 BC009516 AK092628 AK296804 AX747637	373149	-	NM_001031807|SKOR1|390598|SKI family transcriptional corepressor 1##AK293459|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_001206804|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5##AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1##NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1##BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1##BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1##AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1##BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1##BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1##BX640702|CALML4|91860|calmodulin-like 4##BC009516|CALML4|91860|calmodulin-like 4##AK092628|CALML4|91860|calmodulin-like 4##AK296804|CALML4|91860|calmodulin-like 4	0.988519	CTCF.p2:10:0.989
chr19	4379957	4380124	reg1033019.p2	4.221	+	NM_001159846 NM_032868 AK027887 AK308468 TSC_hg19_v1_chr19_+_4343562 BC032652	-36481	+	TSC_hg19_v1_chr19_-_4342718 AK125774	-37290	-	AB527779 TSC_hg19_v1_chr19_-_4338790 BC000795 AJ245719 AK000241 NM_001013841 NM_017720	-41242	-	TSC_hg19_v1_chr19_-_4400419 AY364240 CR542087 AB527297 DQ891258 DQ894444 U65999 X99656 AK097616 NM_001199944	20353	-	BC001270 TSC_hg19_v1_chr19_-_4400513 AK315450 BC098565 AK299166 NM_001199943 NM_003025	20513	-	BC067093 NM_005483 BC052620 TSC_hg19_v1_chr19_+_4402664 BC041606 AB527824 U20979 BC005813 BC011560	22676	+	NM_001159846|MPND|84954|MPN domain containing##NM_032868|MPND|84954|MPN domain containing##AK027887|MPND|84954|MPN domain containing##AK308468|MPND|84954|MPN domain containing##BC032652|MPND|84954|MPN domain containing##AK125774|STAP2|55620|signal transducing adaptor family member 2##BC000795|STAP2|55620|signal transducing adaptor family member 2##AJ245719|STAP2|55620|signal transducing adaptor family member 2##AK000241|STAP2|55620|signal transducing adaptor family member 2##NM_001013841|STAP2|55620|signal transducing adaptor family member 2##NM_017720|STAP2|55620|signal transducing adaptor family member 2##AY364240|SH3GL1|6455|SH3-domain GRB2-like 1##CR542087|SH3GL1|6455|SH3-domain GRB2-like 1##DQ891258|SH3GL1|6455|SH3-domain GRB2-like 1##DQ894444|SH3GL1|6455|SH3-domain GRB2-like 1##U65999|SH3GL1|6455|SH3-domain GRB2-like 1##X99656|SH3GL1|6455|SH3-domain GRB2-like 1##AK097616|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199944|SH3GL1|6455|SH3-domain GRB2-like 1##BC001270|SH3GL1|6455|SH3-domain GRB2-like 1##AK315450|SH3GL1|6455|SH3-domain GRB2-like 1##BC098565|SH3GL1|6455|SH3-domain GRB2-like 1##AK299166|SH3GL1|6455|SH3-domain GRB2-like 1##NM_001199943|SH3GL1|6455|SH3-domain GRB2-like 1##NM_003025|SH3GL1|6455|SH3-domain GRB2-like 1##BC067093|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##NM_005483|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC052620|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC041606|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##U20979|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC005813|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)##BC011560|CHAF1A|10036|chromatin assembly factor 1, subunit A (p150)	0.0	
chr20	34638835	34638997	reg1035577.p2	4.221	+	TSC_hg19_v1_chr20_-_34638883 BC011592 AK090641 AX746554 BC031254	-12	-	AK057454 NM_001207076 NM_080834 BC030782 BC057288 BC114634 BC114945	-82380	+	NM_016558	-95636	-	TSC_hg19_v1_chr20_+_34680631 AK096848 AK299817 AK126875 BC040259	41735	+	CR936825 NM_177996	61386	+	TSC_hg19_v1_chr20_+_34742659 NM_012156 AB002336	103749	+	BC011592|LOC647979|647979|uncharacterized LOC647979##AK090641|LOC647979|647979|uncharacterized LOC647979##AK057454|C20orf152|140894|chromosome 20 open reading frame 152##NM_001207076|C20orf152|140894|chromosome 20 open reading frame 152##NM_080834|C20orf152|140894|chromosome 20 open reading frame 152##BC030782|C20orf152|140894|chromosome 20 open reading frame 152##BC057288|C20orf152|140894|chromosome 20 open reading frame 152##BC114634|C20orf152|140894|chromosome 20 open reading frame 152##BC114945|C20orf152|140894|chromosome 20 open reading frame 152##NM_016558|SCAND1|51282|SCAN domain containing 1##AK096848|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK299817|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK126875|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##BC040259|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##CR936825|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##NM_177996|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##NM_012156|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AB002336|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1	0.0	
chr2	199239262	199239360	reg1033327.p1	4.221	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	-569941	+	NM_197970 AK302817	-588325	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-589271	-	TSC_hg19_v1_chr2_-_200213802 AK025127	974539	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	1081491	-	TSC_hg19_v1_chr2_-_200322238 AJ438951	1082939	-	AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2##AJ438951|SATB2|23314|SATB homeobox 2	0.807148	CTCF.p2:-20:0.807
chr22	24552962	24553117	reg1030841.p1	4.221	+	TSC_hg19_v1_chr22_+_24551954 AL390166	-1082	+	TSC_hg19_v1_chr22_+_24407870 AB002328 BC041659	-145144	+	TSC_hg19_v1_chr22_+_24407863 NM_001199281 BC013099 BC028969	-145199	+	TSC_hg19_v1_chr22_+_24577424 AK026431	24388	+	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	24405	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	87940	-	AL390166|CABIN1|23523|calcineurin binding protein 1##AB002328|CABIN1|23523|calcineurin binding protein 1##BC041659|CABIN1|23523|calcineurin binding protein 1##NM_001199281|CABIN1|23523|calcineurin binding protein 1##BC013099|CABIN1|23523|calcineurin binding protein 1##BC028969|CABIN1|23523|calcineurin binding protein 1##AK026431|SUSD2|56241|sushi domain containing 2##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5	0.224958	CTCF.p2:-65:0.225
chr4	125243522	125243669	reg1034901.p1	4.221	+	AK026960 BC063856 NM_005841	-922922	+	TSC_hg19_v1_chr4_+_124317949 AY192146 NM_199327	-925639	+	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	-1399343	+	TSC_hg19_v1_chr4_-_125633888 AK291068 AK295135 NM_001167882 NM_020337	390219	-	NM_024582	993971	+	TSC_hg19_v1_chr4_+_128554111 NM_015693 AK291481 BC051698 AB033110 BC130611 BC144182 HQ258681 CU690824	3310544	+	AK026960|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##BC063856|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_005841|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##AY192146|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_199327|SPRY1|10252|sprouty homolog 1, antagonist of FGF signaling (Drosophila)##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5##AK291068|ANKRD50|57182|ankyrin repeat domain 50##AK295135|ANKRD50|57182|ankyrin repeat domain 50##NM_001167882|ANKRD50|57182|ankyrin repeat domain 50##NM_020337|ANKRD50|57182|ankyrin repeat domain 50##NM_024582|FAT4|79633|FAT tumor suppressor homolog 4 (Drosophila)##NM_015693|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AK291481|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC051698|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##AB033110|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC130611|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##BC144182|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)##HQ258681|INTU|27152|inturned planar cell polarity effector homolog (Drosophila)	0.991133	CTCF.p2:-4:0.991
chr6	30509368	30509472	reg1032826.p1	4.221	+	NM_005516 AK292391 TSC_hg19_v1_chr6_+_30457288 AK098434 AK225048 AK296822 AK298695 AK300906 AK301125 AK314411 AK316327 BC040479 BC002578 M20022 AB385554 DQ891891 DQ895077 AJ293263 AJ293264 AY216681 AY221103 BC004297 AB209870 M31183	-52161	+	TSC_hg19_v1_chr6_+_30312924 NM_001199120 NM_001199121 NM_024839 AF212152 AJ504714 AK026291 BC011730 AJ504713 AJ504715 AJ504716 CU680032	-196456	+	NM_001199119 AB587493 BT007370 CU675745 CU690008	-212330	+	TSC_hg19_v1_chr6_-_30523667 AK302480	14198	-	L25665 TSC_hg19_v1_chr6_-_30524034 BT006648 CU676240 DQ890763 DQ893926 DQ896096 BC013959 BC006343 AK026391 AK316391 AK298042 AK293596	14779	-	NM_001077497 NM_025263	15065	+	NM_005516|HLA-E|3133|major histocompatibility complex, class I, E##AK292391|HLA-E|3133|major histocompatibility complex, class I, E##AK098434|HLA-E|3133|major histocompatibility complex, class I, E##AK225048|HLA-E|3133|major histocompatibility complex, class I, E##AK296822|HLA-E|3133|major histocompatibility complex, class I, E##AK298695|HLA-E|3133|major histocompatibility complex, class I, E##AK300906|HLA-E|3133|major histocompatibility complex, class I, E##AK301125|HLA-E|3133|major histocompatibility complex, class I, E##AK314411|HLA-E|3133|major histocompatibility complex, class I, E##AK316327|HLA-E|3133|major histocompatibility complex, class I, E##BC040479|HLA-E|3133|major histocompatibility complex, class I, E##BC002578|HLA-E|3133|major histocompatibility complex, class I, E##M20022|HLA-E|3133|major histocompatibility complex, class I, E##DQ891891|HLA-E|3133|major histocompatibility complex, class I, E##DQ895077|HLA-E|3133|major histocompatibility complex, class I, E##AJ293263|HLA-E|3133|major histocompatibility complex, class I, E##AJ293264|HLA-E|3133|major histocompatibility complex, class I, E##AY216681|HLA-E|3133|major histocompatibility complex, class I, E##AY221103|HLA-E|3133|major histocompatibility complex, class I, E##BC004297|HLA-E|3133|major histocompatibility complex, class I, E##AB209870|HLA-E|3133|major histocompatibility complex, class I, E##M31183|HLA-E|3133|major histocompatibility complex, class I, E##NM_001199120|RPP21|79897|ribonuclease P/MRP 21kDa subunit##NM_001199121|RPP21|79897|ribonuclease P/MRP 21kDa subunit##NM_024839|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AF212152|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AJ504714|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AK026291|RPP21|79897|ribonuclease P/MRP 21kDa subunit##BC011730|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AJ504713|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AJ504715|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AJ504716|RPP21|79897|ribonuclease P/MRP 21kDa subunit##NM_001199119|TRIM39-RPP21|202658|TRIM39-RPP21 readthrough##BT007370|TRIM39|56658|tripartite motif containing 39##AK302480|GNL1|2794|guanine nucleotide binding protein-like 1##L25665|GNL1|2794|guanine nucleotide binding protein-like 1##BT006648|GNL1|2794|guanine nucleotide binding protein-like 1##DQ890763|GNL1|2794|guanine nucleotide binding protein-like 1##DQ893926|GNL1|2794|guanine nucleotide binding protein-like 1##DQ896096|GNL1|2794|guanine nucleotide binding protein-like 1##BC013959|GNL1|2794|guanine nucleotide binding protein-like 1##BC006343|GNL1|2794|guanine nucleotide binding protein-like 1##AK026391|GNL1|2794|guanine nucleotide binding protein-like 1##AK316391|GNL1|2794|guanine nucleotide binding protein-like 1##AK298042|GNL1|2794|guanine nucleotide binding protein-like 1##AK293596|GNL1|2794|guanine nucleotide binding protein-like 1##NM_001077497|PRR3|80742|proline rich 3##NM_025263|PRR3|80742|proline rich 3	0.95208	CTCF.p2:-10:0.952
chr6_cox_hap2	2077295	2077401	reg1032099.p1	4.221	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.147186	
chr8	30182083	30182176	reg1031853.p1	4.221	+	D84145 NM_006571 TSC_hg19_v1_chr8_+_30013882 AK314128 BC013175 CR456851	-168274	+	NM_001100916 EU518495	-179929	-	TSC_hg19_v1_chr8_+_29952989 AK075363 AF161461 DQ891897 DQ895083 CR541735 CR541760	-229130	+	Z36874 TSC_hg19_v1_chr8_+_30209759	27608	+	NM_001008710 NM_001008711 NM_001008712 NM_006867 AK304858 D84107 D84108 D84109 D84110 TSC_hg19_v1_chr8_+_30242056 BC003608	59880	+	NM_001206847	313987	+	D84145|DCTN6|10671|dynactin 6##NM_006571|DCTN6|10671|dynactin 6##AK314128|DCTN6|10671|dynactin 6##BC013175|DCTN6|10671|dynactin 6##CR456851|DCTN6|10671|dynactin 6##NM_001100916|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##EU518495|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing##NM_006867|RBPMS|11030|RNA binding protein with multiple splicing##AK304858|RBPMS|11030|RNA binding protein with multiple splicing##D84107|RBPMS|11030|RNA binding protein with multiple splicing##D84108|RBPMS|11030|RNA binding protein with multiple splicing##D84109|RBPMS|11030|RNA binding protein with multiple splicing##D84110|RBPMS|11030|RNA binding protein with multiple splicing##BC003608|RBPMS|11030|RNA binding protein with multiple splicing##NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341	0.0	
chrX	34912009	34912158	reg1035019.p1	4.221	+	TSC_hg19_v1_chrX_-_34675406 BC039242 NM_031442	-236675	-	BC026171 AK292354 NM_203408	-761647	-	NM_000109	-1554358	-	BC035026 NM_152631 AK093101 AX747923 CU690032	48846	+	NM_001099921	904375	+	NM_152632 AK126295 BC027936 CU693328	1025799	+	BC039242|TMEM47|83604|transmembrane protein 47##NM_031442|TMEM47|83604|transmembrane protein 47##BC026171|FAM47A|158724|family with sequence similarity 47, member A##AK292354|FAM47A|158724|family with sequence similarity 47, member A##NM_203408|FAM47A|158724|family with sequence similarity 47, member A##NM_000109|DMD|1756|dystrophin##BC035026|FAM47B|170062|family with sequence similarity 47, member B##NM_152631|FAM47B|170062|family with sequence similarity 47, member B##AK093101|FAM47B|170062|family with sequence similarity 47, member B##NM_001099921|MAGEB16|139604|melanoma antigen family B, 16##NM_152632|CXorf22|170063|chromosome X open reading frame 22##AK126295|CXorf22|170063|chromosome X open reading frame 22##BC027936|CXorf22|170063|chromosome X open reading frame 22	0.988531	CTCF.p2:-16:0.989
chr11	19821851	19821997	reg1027229.p2	4.220	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	-87058	+	AB063115 NM_001111018 AJ488205	-449609	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-558723	-	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	222464	+	TSC_hg19_v1_chr11_+_20049136 AK307574	227208	+	AK290458 TSC_hg19_v1_chr11_+_20070637	248699	+	AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##AK290458|NAV2|89797|neuron navigator 2	0.97024	CTCF.p2:-4:0.970
chr12	133263788	133263910	reg1029920.p1	4.220	+	BC021559 TSC_hg19_v1_chr12_-_133215909	-48007	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	-68445	+	NM_001195520	-76813	-	TSC_hg19_v1_chr12_-_133263981 U49356 S60080 BC144561 L09561 NM_006231	91	-	TSC_hg19_v1_chr12_-_133264011 AF128542	172	-	TSC_hg19_v1_chr12_+_133264236 AF250136 NM_018663 BC073997 AY044439	355	+	BC021559|POLE|5426|polymerase (DNA directed), epsilon##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##U49356|POLE|5426|polymerase (DNA directed), epsilon##S60080|POLE|5426|polymerase (DNA directed), epsilon##BC144561|POLE|5426|polymerase (DNA directed), epsilon##L09561|POLE|5426|polymerase (DNA directed), epsilon##NM_006231|POLE|5426|polymerase (DNA directed), epsilon##AF128542|POLE|5426|polymerase (DNA directed), epsilon##AF250136|PXMP2|5827|peroxisomal membrane protein 2, 22kDa##NM_018663|PXMP2|5827|peroxisomal membrane protein 2, 22kDa##BC073997|PXMP2|5827|peroxisomal membrane protein 2, 22kDa##AY044439|PXMP2|5827|peroxisomal membrane protein 2, 22kDa	0.328588	CTCF.p2:-23:0.250
chr12	14519242	14519319	reg1021453.p3	4.220	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	-645	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-386294	-	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-1169551	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	18992	+	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	201329	-	NM_024829 TSC_hg19_v1_chr12_-_14720806	201524	-	AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1##NM_024829|PLBD1|79887|phospholipase B domain containing 1	0.01128	
chr1	229850687	229850855	reg1005812.p1	4.220	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-88757	+	AK291013 TSC_hg19_v1_chr1_+_229761973 D50923 NM_014777 BC059381	-88797	+	NM_001025247 NM_014409 TSC_hg19_v1_chr1_-_229761804	-88973	-	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	352171	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	352225	+	BC150638 NM_024554	662619	-	BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##AK291013|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##D50923|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_014777|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC059381|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_001025247|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_014409|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5	0.0	
chr13	27231139	27231255	reg1037690.p1	4.220	+	TSC_hg19_v1_chr13_+_27131892 AF454702	-99295	+	TSC_hg19_v1_chr13_+_27131854 AK289845 BC050283 NM_006646	-99363	+	BC069634 BC104492 BC105950 BC107601 NM_001260 X85753 AY702976 CU686950	-402431	+	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	103656	-	DQ894074 AF022789 TSC_hg19_v1_chr13_-_27745948 AK289685	514664	-	TSC_hg19_v1_chr13_-_27746003 BC026072 NM_182488	514889	-	AF454702|WASF3|10810|WAS protein family, member 3##AK289845|WASF3|10810|WAS protein family, member 3##BC050283|WASF3|10810|WAS protein family, member 3##NM_006646|WASF3|10810|WAS protein family, member 3##BC069634|CDK8|1024|cyclin-dependent kinase 8##BC104492|CDK8|1024|cyclin-dependent kinase 8##BC105950|CDK8|1024|cyclin-dependent kinase 8##BC107601|CDK8|1024|cyclin-dependent kinase 8##NM_001260|CDK8|1024|cyclin-dependent kinase 8##X85753|CDK8|1024|cyclin-dependent kinase 8##AY702976|CDK8|1024|cyclin-dependent kinase 8##AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12##DQ894074|USP12|219333|ubiquitin specific peptidase 12##AF022789|USP12|219333|ubiquitin specific peptidase 12##AK289685|USP12|219333|ubiquitin specific peptidase 12##BC026072|USP12|219333|ubiquitin specific peptidase 12##NM_182488|USP12|219333|ubiquitin specific peptidase 12	0.82632	CTCF.p2:24:0.826
chr13	34117061	34117242	reg1007416.p2	4.220	+	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	-192383	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	-257284	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-336987	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	133784	-	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	275076	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	275133	+	AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa	0.0	
chr4	150567104	150567202	reg1034462.p1	4.220	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-1203569	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-1203814	-	TSC_hg19_v1_chr4_-_149357955 AB587357	-1209171	-	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	432372	+	NM_006439	935923	+	TSC_hg19_v1_chr4_-_151770612 AB208838	1203496	-	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.811202	CTCF.p2:42:0.811
chr5	171033586	171033703	reg1032436.p1	4.220	+	BC006245 TSC_hg19_v1_chr5_+_170847089 AB007422 AB528345 AF211188 AM393798 BT019570 BT019571 DQ892736 DQ895983	-186513	+	AY358811 AF075292 NM_003862	-186982	+	AB042278 AB451236 AB451361 AB463949 BT007011 CU676967 CU677717 CU680364 CU692436 DQ892032 DQ895223 EF429251 X16934 TSC_hg19_v1_chr5_+_170815031	-218653	+	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	399884	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	400000	-	BC026213 NM_012300 NM_033644 NM_033645	400232	-	BC006245|FGF18|8817|fibroblast growth factor 18##AB007422|FGF18|8817|fibroblast growth factor 18##AF211188|FGF18|8817|fibroblast growth factor 18##AM393798|FGF18|8817|fibroblast growth factor 18##BT019570|FGF18|8817|fibroblast growth factor 18##BT019571|FGF18|8817|fibroblast growth factor 18##DQ892736|FGF18|8817|fibroblast growth factor 18##DQ895983|FGF18|8817|fibroblast growth factor 18##AY358811|FGF18|8817|fibroblast growth factor 18##AF075292|FGF18|8817|fibroblast growth factor 18##NM_003862|FGF18|8817|fibroblast growth factor 18##AB042278|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451236|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451361|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BT007011|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ892032|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ895223|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##EF429251|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##X16934|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11	0.158511	
chr5	176816436	176816616	reg1002792.p1	4.220	+	AK096088 NM_001167579 NM_003052 TSC_hg19_v1_chr5_+_176811434 AK298299 BC053349 BC035294 BC050385 L13258	-5084	+	TSC_hg19_v1_chr5_+_176794314 AK098150	-22213	+	TSC_hg19_v1_chr5_+_176784947 AB590533	-31541	+	BC132952 BC132954 NM_001029886	11110	-	TSC_hg19_v1_chr5_-_176831183 BT007350	14699	-	BC012390 TSC_hg19_v1_chr5_-_176831506	14934	-	AK096088|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_001167579|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_003052|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK298299|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC053349|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC035294|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC050385|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##L13258|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK098150|RGS14|10636|regulator of G-protein signaling 14##BC132952|PFN3|345456|profilin 3##BC132954|PFN3|345456|profilin 3##NM_001029886|PFN3|345456|profilin 3##BT007350|F12|2161|coagulation factor XII (Hageman factor)##BC012390|F12|2161|coagulation factor XII (Hageman factor)	0.0	
chr7	101963821	101963924	reg1030327.p2	4.220	+	TSC_hg19_v1_chr7_+_101928431 AB000520	-35429	+	TSC_hg19_v1_chr7_+_101928390 NM_020979	-35475	+	M74099 NM_181552	-502991	+	NM_001146210	33016	-	TSC_hg19_v1_chr7_+_102004329 NM_001242713 BC063572 AK098276	40439	+	TSC_hg19_v1_chr7_+_102004338 BC048257 BC066362	40480	+	AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_020979|SH2B2|10603|SH2B adaptor protein 2##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)##NM_001242713|LOC100289561|100289561|uncharacterized LOC100289561##BC063572|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough##AK098276|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough	0.688426	CTCF.p2:3:0.428	CTCF.p2:6:0.260
chr1	162597607	162597729	reg1032632.p1	4.219	+	TSC_hg19_v1_chr1_+_162531349 AK312685 S73498	-66295	+	TSC_hg19_v1_chr1_+_162531320 NM_003115 BC009377	-66386	+	TSC_hg19_v1_chr1_+_162467635 AJ536197 AK292369 AB384827	-129956	+	TSC_hg19_v1_chr1_+_162602235 NM_001014796 NM_006182 AK095975 AK225196 X74764 BX640899 BC052998 AK314388	4578	+	AK225063 TSC_hg19_v1_chr1_+_162602308	4643	+	AK022929 AF145023 NM_016371 BC065246 AK290741 BC007068 AJ249179 AF098786 AY358962 BT007075 CU675533 CU688024 GQ129366 GQ129367	162872	+	AK312685|UAP1|6675|UDP-N-acteylglucosamine pyrophosphorylase 1##S73498|UAP1|6675|UDP-N-acteylglucosamine pyrophosphorylase 1##NM_003115|UAP1|6675|UDP-N-acteylglucosamine pyrophosphorylase 1##BC009377|UAP1|6675|UDP-N-acteylglucosamine pyrophosphorylase 1##AJ536197|UHMK1|127933|U2AF homology motif (UHM) kinase 1##AK292369|UHMK1|127933|U2AF homology motif (UHM) kinase 1##AB384827|UHMK1|127933|U2AF homology motif (UHM) kinase 1##NM_001014796|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_006182|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK095975|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK225196|DDR2|4921|discoidin domain receptor tyrosine kinase 2##X74764|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BX640899|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BC052998|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK314388|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK225063|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK022929|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF145023|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##NM_016371|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC065246|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AK290741|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC007068|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AJ249179|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF098786|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AY358962|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BT007075|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129366|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129367|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7	0.178577	
chr11	77860891	77860980	reg1030510.p2	4.219	+	TSC_hg19_v1_chr11_+_77850827 AK124949	-10075	+	BC017892 TSC_hg19_v1_chr11_-_77850702 AK098614 NM_001007027 NM_024079	-10238	-	TSC_hg19_v1_chr11_-_77850673 BC001133	-10259	-	TSC_hg19_v1_chr11_-_77899673 AK300320 BC036058 NM_001029859 AK095233	38721	-	AK056231 NM_020798 AK301048 AK307875 TSC_hg19_v1_chr11_+_77899953	38990	+	AB011143 BC152459 NM_012296	191990	-	AK124949|LOC100289388|100289388|uncharacterized LOC100289388##BC017892|ALG8|79053|asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AK098614|ALG8|79053|asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##NM_001007027|ALG8|79053|asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##NM_024079|ALG8|79053|asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##BC001133|ALG8|79053|asparagine-linked glycosylation 8, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AK300320|KCTD21|283219|potassium channel tetramerisation domain containing 21##BC036058|KCTD21|283219|potassium channel tetramerisation domain containing 21##NM_001029859|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK095233|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK056231|USP35|57558|ubiquitin specific peptidase 35##NM_020798|USP35|57558|ubiquitin specific peptidase 35##AK301048|USP35|57558|ubiquitin specific peptidase 35##AK307875|USP35|57558|ubiquitin specific peptidase 35##AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2	0.687451	CTCF.p2:-3:0.687
chr15	91204622	91204767	reg1035776.p2	4.219	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-131498	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-273155	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-273188	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	55920	+	NM_002569 X17094	207190	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	223007	+	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene	0.0	
chr22	46751644	46751824	reg1003030.p2	4.219	+	TSC_hg19_v1_chr22_+_46731810 AK303020	-19924	+	TSC_hg19_v1_chr22_+_46731615 AB178028 AK001002 AK295173 AK290712 BC066593 BC080631 CR456445 BC027991 BC012076 AB463324 CU013043 CU013331	-20105	+	NM_018006 AY062123 DQ309998 DQ309999 DQ310000	-20425	+	AF231024 NM_014246 TSC_hg19_v1_chr22_-_46933142	181380	-	CR456470 NM_015124 BC129837 AB463563 CU013020 CU013308	270942	+	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	382345	-	AK303020|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AB178028|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK001002|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK295173|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK290712|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC066593|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC080631|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456445|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC027991|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC012076|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013043|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013331|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##NM_018006|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AY062123|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ309998|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ309999|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ310000|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AF231024|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##NM_014246|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##CR456470|GRAMD4|23151|GRAM domain containing 4##NM_015124|GRAMD4|23151|GRAM domain containing 4##BC129837|GRAMD4|23151|GRAM domain containing 4##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase	0.0	
chr3	59939056	59939176	reg1032415.p2	4.219	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-903356	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-903375	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-903408	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	1297974	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	1608095	+	BC047734 TSC_hg19_v1_chr3_+_61547294	1608170	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.111731	
chr6	42072299	42072385	reg1013259.p2	4.219	+	TSC_hg19_v1_chr6_+_42018268 BC018796 AF465841 CU689710	-54071	+	BC033728 NM_138572 TSC_hg19_v1_chr6_+_42018261 AK057383 BC119678 BC119679 AL833401	-54086	+	NM_001136017 NM_001136126	-55733	-	NM_001164446	38372	-	AK313865 NM_000409 BC031663 AK125780	50821	+	BX537393 NM_002098	90351	-	BC018796|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AF465841|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC033728|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##NM_138572|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AK057383|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119678|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BC119679|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AL833401|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##NM_001136017|CCND3|896|cyclin D3##NM_001136126|CCND3|896|cyclin D3##NM_001164446|C6orf132|647024|chromosome 6 open reading frame 132##AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)##NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)##BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)##AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)##BX537393|GUCA1B|2979|guanylate cyclase activator 1B (retina)##NM_002098|GUCA1B|2979|guanylate cyclase activator 1B (retina)	0.339126	CTCF.p2:-26:0.339
chr7	1015137	1015220	reg1034671.p2	4.219	+	TSC_hg19_v1_chr7_-_994377 AJ006422	-20715	-	TSC_hg19_v1_chr7_-_994317 NM_006869	-20865	-	TSC_hg19_v1_chr7_-_994129 AB587419 BC033747	-21063	-	BC042434 BC053372 TSC_hg19_v1_chr7_-_1015171 BC058158 AK023185 BC110420 BC070383 AK290517 AY957566 BC103632 NM_001031617	11	-	TSC_hg19_v1_chr7_+_1022816 BC025761 NM_017781	7640	+	TSC_hg19_v1_chr7_+_1022978 AK000366	7791	+	AJ006422|ADAP1|11033|ArfGAP with dual PH domains 1##NM_006869|ADAP1|11033|ArfGAP with dual PH domains 1##BC033747|ADAP1|11033|ArfGAP with dual PH domains 1##BC042434|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC053372|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC058158|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK023185|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC110420|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC070383|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK290517|ADAP1|11033|ArfGAP with dual PH domains 1##AY957566|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC103632|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_001031617|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC025761|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##NM_017781|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##AK000366|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1	0.0	
chr9	126486798	126486967	reg1038382.p1	4.219	+	NM_173689 AK123000 DQ426866 AY720432	-368389	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-455994	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	-456062	-	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	205429	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	287001	+	TSC_hg19_v1_chr9_+_126774046 BC034458	287189	+	NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC034458|LHX2|9355|LIM homeobox 2	0.874087	CTCF.p2:-3:0.874
chr1	165897236	165897350	reg1002880.p1	4.218	+	AF236637 AK294537 TSC_hg19_v1_chr1_+_165797063 AB062451	-100207	+	TSC_hg19_v1_chr1_+_165796794 NM_012474 BC002906	-100522	+	AK124964 BC009228 TSC_hg19_v1_chr1_+_165738255 BC071770	-159072	+	TSC_hg19_v1_chr1_-_166135951 NM_001017961	238661	-	TSC_hg19_v1_chr1_-_166135982 AB593134	238692	-	TSC_hg19_v1_chr1_-_166136076 BC114214	238847	-	AF236637|UCK2|7371|uridine-cytidine kinase 2##AK294537|UCK2|7371|uridine-cytidine kinase 2##AB062451|UCK2|7371|uridine-cytidine kinase 2##NM_012474|UCK2|7371|uridine-cytidine kinase 2##BC002906|UCK2|7371|uridine-cytidine kinase 2##AK124964|LOC100147773|100147773|uncharacterized LOC100147773##BC009228|LOC100147773|100147773|uncharacterized LOC100147773##BC071770|LOC100147773|100147773|uncharacterized LOC100147773##NM_001017961|FAM78B|149297|family with sequence similarity 78, member B##BC114214|FAM78B|149297|family with sequence similarity 78, member B	0.0	
chr12	6533122	6533302	reg1000247.p2	4.218	+	TSC_hg19_v1_chr12_+_6493333 AK095418 BC026262 AK027080 L04270 NM_002342 AB527559 DQ891995 DQ895185 CU693188	-39840	+	AK304379 NM_001159575	-46690	-	NM_001038	-48308	-	AK315732 NM_001242 BC012160 M63928 DQ892296 EU176659 AB590221 CU680244	20934	+	NM_018009 TSC_hg19_v1_chr12_+_6561272 BC015017 AK223163 AK001005 AK002056 AK222956 AK098035 HQ258015	28082	+	TSC_hg19_v1_chr12_-_6579844 AF060538 BC023286 AK289498 AK296294 AK303137 AK309184 NM_014231 NM_016830 NM_199245	46602	-	AK095418|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##BC026262|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK027080|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##L04270|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##NM_002342|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ891995|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ895185|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK304379|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001159575|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001038|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##AK315732|CD27|939|CD27 molecule##NM_001242|CD27|939|CD27 molecule##BC012160|CD27|939|CD27 molecule##M63928|CD27|939|CD27 molecule##DQ892296|CD27|939|CD27 molecule##EU176659|CD27|939|CD27 molecule##NM_018009|TAPBPL|55080|TAP binding protein-like##BC015017|TAPBPL|55080|TAP binding protein-like##AK223163|TAPBPL|55080|TAP binding protein-like##AK001005|TAPBPL|55080|TAP binding protein-like##AK002056|TAPBPL|55080|TAP binding protein-like##AK222956|TAPBPL|55080|TAP binding protein-like##AK098035|TAPBPL|55080|TAP binding protein-like##HQ258015|TAPBPL|55080|TAP binding protein-like##AF060538|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC023286|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK289498|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK296294|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK303137|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK309184|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_014231|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_016830|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_199245|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)	0.0	
chr12	92566602	92566782	reg1033682.p2	4.218	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-27049	-	NM_001920	-989887	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-990112	-	AJ845165 AJ845166 NM_001025233	251042	+	AJ845168 NM_001025232	255231	-	NM_001037671 NM_001178097	529926	+	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74	0.017834	
chr16	29743403	29743584	reg1033736.p1	4.218	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-53011	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-53099	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-68479	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	13808	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	46093	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	58558	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.0	
chr19	39184589	39184769	reg1033439.p2	4.218	+	AK023756 TSC_hg19_v1_chr19_+_39155341	-29404	+	TSC_hg19_v1_chr19_+_39138349 BC005033 GU987085 AB590161 CU678876 DQ431186 DQ893439 DQ896777 D89980	-46308	+	TSC_hg19_v1_chr19_+_39138326 AK299955 AK304554 AK309361 AK309364 BX647098	-46358	+	TSC_hg19_v1_chr19_-_39227632 AK125713	42943	-	AK127398 NM_144691	50434	-	U06643 BC061588 BC073743 L07769 NM_002307	79471	-	BC005033|ACTN4|81|actinin, alpha 4##GU987085|ACTN4|81|actinin, alpha 4##DQ431186|ACTN4|81|actinin, alpha 4##DQ893439|ACTN4|81|actinin, alpha 4##DQ896777|ACTN4|81|actinin, alpha 4##D89980|ACTN4|81|actinin, alpha 4##AK299955|ACTN4|81|actinin, alpha 4##AK304554|ACTN4|81|actinin, alpha 4##AK309361|ACTN4|81|actinin, alpha 4##AK309364|ACTN4|81|actinin, alpha 4##BX647098|ACTN4|81|actinin, alpha 4##AK125713|CAPN12|147968|calpain 12##AK127398|CAPN12|147968|calpain 12##NM_144691|CAPN12|147968|calpain 12##U06643|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC061588|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC073743|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##L07769|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##NM_002307|LGALS7|3963|lectin, galactoside-binding, soluble, 7	0.0	
chr19	45086295	45086388	reg1031330.p1	4.218	+	EU008600 EU008601 EU008602 EU008603 NM_001102597 NM_001102598 NM_001102599 NM_001102600	-52794	-	BC113015 BC051903 TSC_hg19_v1_chr19_-_45004551 BC033642 AF192913 AK024047 AK122688 AK315193 NM_013256	-81799	-	TSC_hg19_v1_chr19_-_44952641 AB209357 AF192979 NM_014518 CR936724	-133644	-	TSC_hg19_v1_chr19_+_45116925 NM_001205280	30589	+	TSC_hg19_v1_chr19_+_45147159 NM_001135768 NM_001135769 NM_001135770 NM_006505	60790	+	TSC_hg19_v1_chr19_+_45147180 AK290946	60840	+	EU008600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##EU008601|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##EU008602|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##EU008603|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001102597|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001102598|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001102599|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001102600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##BC113015|ZNF180|7733|zinc finger protein 180##BC051903|ZNF180|7733|zinc finger protein 180##BC033642|ZNF180|7733|zinc finger protein 180##AF192913|ZNF180|7733|zinc finger protein 180##AK024047|ZNF180|7733|zinc finger protein 180##AK122688|ZNF180|7733|zinc finger protein 180##AK315193|ZNF180|7733|zinc finger protein 180##NM_013256|ZNF180|7733|zinc finger protein 180##AB209357|ZNF229|7772|zinc finger protein 229##AF192979|ZNF229|7772|zinc finger protein 229##NM_014518|ZNF229|7772|zinc finger protein 229##CR936724|ZNF229|7772|zinc finger protein 229##NM_001205280|IGSF23|147710|immunoglobulin superfamily, member 23##NM_001135768|PVR|5817|poliovirus receptor##NM_001135769|PVR|5817|poliovirus receptor##NM_001135770|PVR|5817|poliovirus receptor##NM_006505|PVR|5817|poliovirus receptor##AK290946|PVR|5817|poliovirus receptor	0.972741	CTCF.p2:-14:0.973
chr2	103778131	103778224	reg1012705.p2	4.218	+	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	-399595	+	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	-424795	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	-424844	-	TSC_hg19_v1_chr2_-_105467912 AK096498	1689739	-	TSC_hg19_v1_chr2_+_105471877 NM_006236	1693721	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	1876337	+	CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182##AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##NM_006236|POU3F3|5455|POU class 3 homeobox 3##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9	0.863849	
chr2	108966735	108966895	reg1003827.p2	4.218	+	AF186252 AF186255 NM_001056 NM_176825 AF186251 AF186254 AK297086 AK313193 AK298306 U66036 AF186253 AF186256 AB008164 AF026303 BC005353	-61530	+	AB528243 NM_001008743	-103165	+	AK315280 AB084377 AK300801 AB043997 NM_021815 BC111525 BC111524	-363813	+	BC058861 NM_006588 AK298755 AF055584 AK297851 BC125043	27688	+	NM_181453 BC037774 TSC_hg19_v1_chr2_+_109065661	98805	+	TSC_hg19_v1_chr2_+_109065677 AF432211 AB002334 BC146789	98870	+	AF186252|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186255|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001056|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_176825|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186251|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186254|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK297086|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK313193|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK298306|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##U66036|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186253|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186256|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AB008164|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF026303|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC005353|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3##AK315280|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB084377|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AK300801|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB043997|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_021815|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111525|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111524|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC058861|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##NM_006588|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK298755|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK297851|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##BC125043|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##NM_181453|GCC2|9648|GRIP and coiled-coil domain containing 2##BC037774|GCC2|9648|GRIP and coiled-coil domain containing 2##AF432211|GCC2|9648|GRIP and coiled-coil domain containing 2##AB002334|GCC2|9648|GRIP and coiled-coil domain containing 2##BC146789|GCC2|9648|GRIP and coiled-coil domain containing 2	0.0	
chr22	38712897	38713078	reg1025742.p3	4.218	+	TSC_hg19_v1_chr22_-_38669012 BC015489 AB097053 AK309071 AK292652 NM_001195072 NM_012264	-43979	-	TSC_hg19_v1_chr22_-_38668943 CR749859	-44042	-	NM_001195071	-44318	-	BC006490 AB091043 TSC_hg19_v1_chr22_-_38713340 AK223498	304	-	TSC_hg19_v1_chr22_-_38713439 NM_152221	427	-	AB024597 NM_001894	1101	-	BC015489|TMEM184B|25829|transmembrane protein 184B##AB097053|TMEM184B|25829|transmembrane protein 184B##AK309071|TMEM184B|25829|transmembrane protein 184B##AK292652|TMEM184B|25829|transmembrane protein 184B##NM_001195072|TMEM184B|25829|transmembrane protein 184B##NM_012264|TMEM184B|25829|transmembrane protein 184B##CR749859|TMEM184B|25829|transmembrane protein 184B##NM_001195071|TMEM184B|25829|transmembrane protein 184B##BC006490|CSNK1E|1454|casein kinase 1, epsilon##AB091043|CSNK1E|1454|casein kinase 1, epsilon##AK223498|CSNK1E|1454|casein kinase 1, epsilon##NM_152221|CSNK1E|1454|casein kinase 1, epsilon##AB024597|CSNK1E|1454|casein kinase 1, epsilon##NM_001894|CSNK1E|1454|casein kinase 1, epsilon	0.300633	CTCF.p2:-86:0.301
chr3	49365044	49365131	reg1027072.p1	4.218	+	BC032616 CU687502 CU691014 AK125642 BC061697 BC053629 NM_198562	-50693	-	AK303033 NM_001135197 BC015057 AK058049	-128127	+	BC036202 NM_178173	-129227	+	TSC_hg19_v1_chr3_-_49377456 AF017306	12360	-	AF017305 U20657 TSC_hg19_v1_chr3_-_49377473 AK222725 AK223292 BC068017	12381	-	TSC_hg19_v1_chr3_-_49377482 AK291795	12393	-	BC032616|C3orf62|375341|chromosome 3 open reading frame 62##AK125642|C3orf62|375341|chromosome 3 open reading frame 62##BC061697|C3orf62|375341|chromosome 3 open reading frame 62##BC053629|C3orf62|375341|chromosome 3 open reading frame 62##NM_198562|C3orf62|375341|chromosome 3 open reading frame 62##AK303033|CCDC36|339834|coiled-coil domain containing 36##NM_001135197|CCDC36|339834|coiled-coil domain containing 36##BC015057|CCDC36|339834|coiled-coil domain containing 36##AK058049|CCDC36|339834|coiled-coil domain containing 36##BC036202|CCDC36|339834|coiled-coil domain containing 36##NM_178173|CCDC36|339834|coiled-coil domain containing 36##AF017306|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##AF017305|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##U20657|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##AK222725|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##AK223292|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##BC068017|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##AK291795|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)	0.943636	CTCF.p2:7:0.944
chr10	126406684	126406864	reg1030369.p1	4.217	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-256353	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-268197	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-299256	-	D50930 TSC_hg19_v1_chr10_-_126432660	25870	-	TSC_hg19_v1_chr10_-_126432823 BC031654	26042	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	26137	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.0	
chr10	92961304	92961433	reg1029311.p1	4.217	+	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	-38606	+	X83703 NM_014391	-280340	-	AB528537 DQ892852 DQ896099 AY903446 BC005191 AK290960 BC018667 TSC_hg19_v1_chr10_-_92680845	-280552	-	TSC_hg19_v1_chr10_+_92980445 NM_032373	19040	+	TSC_hg19_v1_chr10_+_92980539 AL832496	19166	+	BC071762 TSC_hg19_v1_chr10_+_93170064	208690	+	BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5##X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##NM_032373|PCGF5|84333|polycomb group ring finger 5##AL832496|PCGF5|84333|polycomb group ring finger 5	0.0	
chr11	75918889	75919070	reg1002206.p2	4.217	+	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	-1467	-	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	-392701	+	NM_003369 TSC_hg19_v1_chr11_+_75526233 AK291011	-392757	+	TSC_hg19_v1_chr11_-_75921806 AK075540	2825	-	TSC_hg19_v1_chr11_-_76091995 AB590785 AF007393 AF081567 HQ258648 NM_004705 AK291843 BC117138 BC117140 BC110304	173029	-	TSC_hg19_v1_chr11_+_76092383 AK125821 BC040665 AK095089	173444	+	BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11##BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##NM_003369|UVRAG|7405|UV radiation resistance associated gene##AK291011|UVRAG|7405|UV radiation resistance associated gene##AK075540|WNT11|7481|wingless-type MMTV integration site family, member 11##AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	0.036334	
chr1	224294550	224294676	reg1031639.p2	4.217	+	NM_001031685 NM_005426 TSC_hg19_v1_chr1_-_224033682	-260919	-	TSC_hg19_v1_chr1_-_224033620 BC046150 AJ318888 U58334 BC058918	-260990	-	AB384887 TSC_hg19_v1_chr1_-_224033497 AK294432	-261150	-	NM_001136115 NM_015176 TSC_hg19_v1_chr1_+_224301812 AK001628 AK307892 BC031576 AK303381 CU689186	7197	+	TSC_hg19_v1_chr1_+_224370925 BC000961 NM_003676	76309	+	TSC_hg19_v1_chr1_+_224370941 AK308232 AF466375 AY423730 AF002668 CU674476	76374	+	NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2##BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2##AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2##U58334|TP53BP2|7159|tumor protein p53 binding protein, 2##BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2##AK294432|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_001136115|FBXO28|23219|F-box protein 28##NM_015176|FBXO28|23219|F-box protein 28##AK001628|FBXO28|23219|F-box protein 28##AK307892|FBXO28|23219|F-box protein 28##BC031576|FBXO28|23219|F-box protein 28##AK303381|FBXO28|23219|F-box protein 28##BC000961|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_003676|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AK308232|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF466375|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AY423730|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF002668|DEGS1|8560|delta(4)-desaturase, sphingolipid 1	0.255742	CTCF.p2:12:0.256
chr1	29706138	29706241	reg1027879.p1	4.217	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-143141	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-148742	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-148809	-	TSC_hg19_v1_chr1_+_31191648 AK057725	1485442	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	1490243	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	1524443	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	0.930577	CTCF.p2:-9:0.931
chr17	80818061	80818241	reg1035425.p4	4.217	+	BC109036 BC109037 AK301690 AK023903 NM_024702	-20242	-	TSC_hg19_v1_chr17_+_80710051 AJ006417 DQ891885 EU176650	-108103	+	TSC_hg19_v1_chr17_+_80710000 AK091959 AX747278	-108143	+	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	188319	-	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	191518	-	TSC_hg19_v1_chr17_+_81037508 BC082252 NM_001004431 BC118558 BC118638	219391	+	BC109036|ZNF750|79755|zinc finger protein 750##BC109037|ZNF750|79755|zinc finger protein 750##AK301690|ZNF750|79755|zinc finger protein 750##AK023903|ZNF750|79755|zinc finger protein 750##NM_024702|ZNF750|79755|zinc finger protein 750##AJ006417|TBCD|6904|tubulin folding cofactor D##DQ891885|TBCD|6904|tubulin folding cofactor D##EU176650|TBCD|6904|tubulin folding cofactor D##AK091959|TBCD|6904|tubulin folding cofactor D##BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like##NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like	0.747233	CTCF.p2:57:0.747
chr18	20886938	20887091	reg1033831.p1	4.217	+	BC037218 NM_138375	-151226	+	EF028204 NM_001100619	-171288	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-373199	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	130857	-	AK057292 NM_003831	145772	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	146232	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.0	
chr22	50161193	50161343	reg1012838.p2	4.217	+	AK124962 TSC_hg19_v1_chr22_-_50051168 BC033837 BC048207	-110135	-	AK125256 NM_015381 AK123443 AY358847	-1189107	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	-1275988	+	AF005067 NM_014577	57183	-	AK292428 TSC_hg19_v1_chr22_-_50221332 BC030007 BC047508	59998	-	TSC_hg19_v1_chr22_-_50221517 AK304776	60213	-	AK124962|C22orf34|348645|chromosome 22 open reading frame 34##BC048207|C22orf34|348645|chromosome 22 open reading frame 34##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF005067|BRD1|23774|bromodomain containing 1##NM_014577|BRD1|23774|bromodomain containing 1##AK292428|BRD1|23774|bromodomain containing 1##BC030007|BRD1|23774|bromodomain containing 1##BC047508|BRD1|23774|bromodomain containing 1##AK304776|BRD1|23774|bromodomain containing 1	0.0	
chr2	53184063	53184191	reg1035007.p1	4.217	+	EF539882 AK124726 NM_001135659 NM_004801	-1924523	-	TSC_hg19_v1_chr2_-_51259258 BC046631	-1924869	-	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	-2609205	-	BC019239 BC025376 NM_001008708 BC053896 BC017941 AK097260	810829	+	AK056069 NM_001201965 BC009569 AB209795 TSC_hg19_v1_chr2_-_54014091 AK000985 AK303133 AK001283 NM_016115 NM_145863	829951	-	NM_001127397 NM_001127398 NM_015701 TSC_hg19_v1_chr2_+_54014180 AY358717 AK001913 AY453410 BC013129 BC022228 AK315477 DQ894762	830080	+	EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1##BC046631|NRXN1|9378|neurexin 1##AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##BC019239|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC025376|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##NM_001008708|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC053896|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC017941|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##AK056069|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_001201965|ASB3|51130|ankyrin repeat and SOCS box containing 3##BC009569|ASB3|51130|ankyrin repeat and SOCS box containing 3##AB209795|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK000985|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK303133|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK001283|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_016115|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_145863|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_001127397|ERLEC1|27248|endoplasmic reticulum lectin 1##NM_001127398|ERLEC1|27248|endoplasmic reticulum lectin 1##NM_015701|ERLEC1|27248|endoplasmic reticulum lectin 1##AY358717|ERLEC1|27248|endoplasmic reticulum lectin 1##AK001913|ERLEC1|27248|endoplasmic reticulum lectin 1##AY453410|ERLEC1|27248|endoplasmic reticulum lectin 1##BC013129|ERLEC1|27248|endoplasmic reticulum lectin 1##BC022228|ERLEC1|27248|endoplasmic reticulum lectin 1##AK315477|ERLEC1|27248|endoplasmic reticulum lectin 1##DQ894762|ERLEC1|27248|endoplasmic reticulum lectin 1	0.584984	CTCF.p2:3:0.585
chr3	185216737	185216869	reg1038736.p1	4.217	+	TSC_hg19_v1_chr3_-_185216824 EU831805 EU831882 AK313954 BC019884 BC008043 BX647928 AY358547 AK172748 AK290878 NM_080652	-104	-	BC026249 NM_004721 AK296961 AB001872 BC111726	-135871	+	AK302951 TSC_hg19_v1_chr3_+_185046682 BC031677	-170112	+	CU687970 TSC_hg19_v1_chr3_-_185270374 AK298380 AY036912 AY093498 EF186228 EF186229 BC064941 AK122651 NM_139248	53525	-	AK304402 TSC_hg19_v1_chr3_+_185304106 AF151697 NM_021627 AK296772 AK027599 AK296744 BC040609 CU691906 AB037752 AB385449 AL834380	87280	+	CU676908 DQ892161 EU176689 TSC_hg19_v1_chr3_-_185542803 AK309611 AF117107 BC012322	325971	-	EU831805|TMEM41A|90407|transmembrane protein 41A##EU831882|TMEM41A|90407|transmembrane protein 41A##AK313954|TMEM41A|90407|transmembrane protein 41A##BC019884|TMEM41A|90407|transmembrane protein 41A##BC008043|TMEM41A|90407|transmembrane protein 41A##BX647928|TMEM41A|90407|transmembrane protein 41A##AY358547|TMEM41A|90407|transmembrane protein 41A##AK172748|TMEM41A|90407|transmembrane protein 41A##AK290878|TMEM41A|90407|transmembrane protein 41A##NM_080652|TMEM41A|90407|transmembrane protein 41A##NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK302951|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC031677|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK298380|LIPH|200879|lipase, member H##AY036912|LIPH|200879|lipase, member H##AY093498|LIPH|200879|lipase, member H##EF186228|LIPH|200879|lipase, member H##EF186229|LIPH|200879|lipase, member H##BC064941|LIPH|200879|lipase, member H##AK122651|LIPH|200879|lipase, member H##NM_139248|LIPH|200879|lipase, member H##AK304402|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AF151697|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##NM_021627|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296772|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK027599|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AK296744|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##BC040609|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##AL834380|SENP2|59343|SUMO1/sentrin/SMT3 specific peptidase 2##DQ892161|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##EU176689|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AK309611|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2##AF117107|IGF2BP2|10644|insulin-like growth factor 2 mRNA binding protein 2	0.0	
chr6	34122780	34122878	reg1003143.p2	4.217	+	AB385221 EU432124 HQ258665 HQ258669 U92457 BC130526 BC130528 BC144057 NM_000841 X80818 AK308669	-21427	-	BC112314 BC143981 Y00695 BC069675 NM_001040109 NM_001184698 NM_002418	-351055	-	BC039864 NM_181336 TSC_hg19_v1_chr6_-_33756906	-365919	-	NM_002131 NM_145899 NM_145903 TSC_hg19_v1_chr6_+_34204617	81782	+	TSC_hg19_v1_chr6_+_34204649 AK096863 M23616 M23617 NM_145901 NM_145902 AK301434	81821	+	TSC_hg19_v1_chr6_+_34204678 X14957 X14958 AK308245	81842	+	EU432124|GRM4|2914|glutamate receptor, metabotropic 4##HQ258665|GRM4|2914|glutamate receptor, metabotropic 4##HQ258669|GRM4|2914|glutamate receptor, metabotropic 4##U92457|GRM4|2914|glutamate receptor, metabotropic 4##BC130526|GRM4|2914|glutamate receptor, metabotropic 4##BC130528|GRM4|2914|glutamate receptor, metabotropic 4##BC144057|GRM4|2914|glutamate receptor, metabotropic 4##NM_000841|GRM4|2914|glutamate receptor, metabotropic 4##X80818|GRM4|2914|glutamate receptor, metabotropic 4##BC112314|MLN|4295|motilin##BC143981|MLN|4295|motilin##Y00695|MLN|4295|motilin##BC069675|MLN|4295|motilin##NM_001040109|MLN|4295|motilin##NM_001184698|MLN|4295|motilin##NM_002418|MLN|4295|motilin##BC039864|LEMD2|221496|LEM domain containing 2##NM_181336|LEMD2|221496|LEM domain containing 2##NM_002131|HMGA1|3159|high mobility group AT-hook 1##NM_145899|HMGA1|3159|high mobility group AT-hook 1##NM_145903|HMGA1|3159|high mobility group AT-hook 1##AK096863|HMGA1|3159|high mobility group AT-hook 1##M23616|HMGA1|3159|high mobility group AT-hook 1##M23617|HMGA1|3159|high mobility group AT-hook 1##NM_145901|HMGA1|3159|high mobility group AT-hook 1##NM_145902|HMGA1|3159|high mobility group AT-hook 1##AK301434|HMGA1|3159|high mobility group AT-hook 1##X14957|HMGA1|3159|high mobility group AT-hook 1##X14958|HMGA1|3159|high mobility group AT-hook 1##AK308245|HMGA1|3159|high mobility group AT-hook 1	0.061628	
chr7	158406389	158406551	reg1029555.p2	4.217	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	-26017	-	TSC_hg19_v1_chr7_+_157647233 BC034557	-759196	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	-1276759	+	BC028618 TSC_hg19_v1_chr7_-_158497496 AK092008 AX747307 BC043404 BX537845 NM_017760	91007	-	TSC_hg19_v1_chr7_-_158611303 AK126214	204900	-	TSC_hg19_v1_chr7_-_158622198 AB033054	215721	-	DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034557|LOC100506585|100506585|uncharacterized LOC100506585##AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC028618|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK092008|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BC043404|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BX537845|NCAPG2|54892|non-SMC condensin II complex, subunit G2##NM_017760|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK126214|ESYT2|57488|extended synaptotagmin-like protein 2##AB033054|ESYT2|57488|extended synaptotagmin-like protein 2	0.0	
chr9	126703382	126703470	reg1030165.p2	4.217	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-11115	-	NM_173689 AK123000 DQ426866 AY720432	-584933	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-672538	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	70457	+	TSC_hg19_v1_chr9_+_126774046 BC034458	70645	+	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	316584	+	BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC034458|LHX2|9355|LIM homeobox 2##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr14	31979638	31979818	reg1012410.p2	4.216	+	GQ981321 GQ981322 NM_001197184	-22578	-	TSC_hg19_v1_chr14_-_31926633 BC010618 AK302829 AK055367 NM_080664	-53053	-	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	-89967	-	TSC_hg19_v1_chr14_+_32030642 NM_025152 AK316445 BX248028 AK295326 BC024919 AK022722 CU692938	50929	+	AK301447 NM_001201573	67393	+	AK093789 NM_001201574	204046	+	GQ981321|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##GQ981322|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##NM_001197184|GPR33|2856|G protein-coupled receptor 33 (gene/pseudogene)##BC010618|C14orf126|112487|chromosome 14 open reading frame 126##AK055367|C14orf126|112487|chromosome 14 open reading frame 126##NM_080664|C14orf126|112487|chromosome 14 open reading frame 126##BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A##NM_025152|NUBPL|80224|nucleotide binding protein-like##AK316445|NUBPL|80224|nucleotide binding protein-like##BX248028|NUBPL|80224|nucleotide binding protein-like##AK295326|NUBPL|80224|nucleotide binding protein-like##BC024919|NUBPL|80224|nucleotide binding protein-like##AK022722|NUBPL|80224|nucleotide binding protein-like##AK301447|NUBPL|80224|nucleotide binding protein-like##NM_001201573|NUBPL|80224|nucleotide binding protein-like##AK093789|NUBPL|80224|nucleotide binding protein-like##NM_001201574|NUBPL|80224|nucleotide binding protein-like	0.0	
chr19	947840	947972	reg1029634.p3	4.216	+	TSC_hg19_v1_chr19_+_926038 AY845638 BC060828 NM_005224	-21895	+	TSC_hg19_v1_chr19_+_917306 BC141812 NM_032551 AY253982 BC140825 AB051065 AF343725 AJ309020 AY029541 AY253981 BC111094 EU883577	-30513	+	NM_138774 TSC_hg19_v1_chr19_-_913224	-34682	-	TSC_hg19_v1_chr19_+_984344 NM_024100 BC000040 BC001648 CU674808	36428	+	TSC_hg19_v1_chr19_+_1000312 AY507106 AY507107 NM_138690	52459	+	DQ893224 DQ896554 CU679197 TSC_hg19_v1_chr19_-_1021121 BC008957 DQ005958	73152	-	AY845638|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC060828|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_005224|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC141812|KISS1R|84634|KISS1 receptor##NM_032551|KISS1R|84634|KISS1 receptor##AY253982|KISS1R|84634|KISS1 receptor##BC140825|KISS1R|84634|KISS1 receptor##AB051065|KISS1R|84634|KISS1 receptor##AF343725|KISS1R|84634|KISS1 receptor##AJ309020|KISS1R|84634|KISS1 receptor##AY029541|KISS1R|84634|KISS1 receptor##AY253981|KISS1R|84634|KISS1 receptor##EU883577|KISS1R|84634|KISS1 receptor##NM_138774|R3HDM4|91300|R3H domain containing 4##NM_024100|WDR18|57418|WD repeat domain 18##BC000040|WDR18|57418|WD repeat domain 18##BC001648|WDR18|57418|WD repeat domain 18##AY507106|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##AY507107|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_138690|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##DQ893224|C19orf6|91304|chromosome 19 open reading frame 6##DQ896554|C19orf6|91304|chromosome 19 open reading frame 6##BC008957|C19orf6|91304|chromosome 19 open reading frame 6##DQ005958|C19orf6|91304|chromosome 19 open reading frame 6	0.0	
chr21	34504493	34504603	reg1030552.p1	4.216	+	TSC_hg19_v1_chr21_+_34444006 BC011252	-60503	+	TSC_hg19_v1_chr21_+_34442554 AB463154 DQ896828 BC026989	-61987	+	TSC_hg19_v1_chr21_+_34442446 BC033290 NM_138983 AL834450 AB209791	-62096	+	BC002793 NM_000874 NM_207584 NM_207585 TSC_hg19_v1_chr21_+_34602236	97672	+	TSC_hg19_v1_chr21_+_34602281 L41942 L41944	97731	+	TSC_hg19_v1_chr21_+_34602305 BC013156 X77722 X89814 U29584	97854	+	BC011252|OLIG1|116448|oligodendrocyte transcription factor 1##DQ896828|OLIG1|116448|oligodendrocyte transcription factor 1##BC026989|OLIG1|116448|oligodendrocyte transcription factor 1##BC033290|OLIG1|116448|oligodendrocyte transcription factor 1##NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1##AL834450|OLIG1|116448|oligodendrocyte transcription factor 1##AB209791|OLIG1|116448|oligodendrocyte transcription factor 1##BC002793|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_000874|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207585|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41942|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41944|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##BC013156|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X77722|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X89814|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##U29584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2	0.993169	CTCF.p2:13:0.967
chr22	24326657	24326786	reg1036680.p2	4.216	+	BC146940 BC146943 NM_000854 AK312043 BC002415 BC146929 BC146936 BC071700 CR456374 CR456500 AB528145 CU013079 CU013097 CU013367 CU013385 DQ890742 CR456929 L38503	-4403	+	NM_001355 U49785	-4703	-	BT006970 CU012991 CU013279 DQ891571 DQ894765 U84143 AK298326 AK292044 CR456431 BC005971 AK296189 AK304122 AK315943 BC015508 NM_001084392	-10081	-	TSC_hg19_v1_chr22_+_24373110 NM_001144931	46391	+	AF435971 BT019951 CU675529 X79389 DQ893480 DQ896757 CR456499 AJ867757 AJ867758 AJ874719 AL359937 TSC_hg19_v1_chr22_-_24384272 AK311138 BC007065 BC064833 NM_000853	57535	-	TSC_hg19_v1_chr22_+_24407753 AF072441 NM_001201429 NM_012295 AK307522 BC054497	81054	+	BC146940|GSTT2|2953|glutathione S-transferase theta 2##BC146943|GSTT2|2953|glutathione S-transferase theta 2##NM_000854|GSTT2|2953|glutathione S-transferase theta 2##AK312043|GSTT2|2953|glutathione S-transferase theta 2##BC002415|GSTT2|2953|glutathione S-transferase theta 2##BC146929|GSTT2|2953|glutathione S-transferase theta 2##BC146936|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##BC071700|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##CR456374|GSTT2|2953|glutathione S-transferase theta 2##CR456500|GSTT2|2953|glutathione S-transferase theta 2##CU013079|GSTT2|2953|glutathione S-transferase theta 2##CU013097|GSTT2|2953|glutathione S-transferase theta 2##CU013367|GSTT2|2953|glutathione S-transferase theta 2##CU013385|GSTT2|2953|glutathione S-transferase theta 2##DQ890742|GSTT2|2953|glutathione S-transferase theta 2##CR456929|GSTT2|2953|glutathione S-transferase theta 2##L38503|GSTT2|2953|glutathione S-transferase theta 2##NM_001355|DDT|1652|D-dopachrome tautomerase##U49785|DDT|1652|D-dopachrome tautomerase##BT006970|DDT|1652|D-dopachrome tautomerase##CU012991|DDT|1652|D-dopachrome tautomerase##CU013279|DDT|1652|D-dopachrome tautomerase##DQ891571|DDT|1652|D-dopachrome tautomerase##DQ894765|DDT|1652|D-dopachrome tautomerase##U84143|DDT|1652|D-dopachrome tautomerase##AK292044|DDT|1652|D-dopachrome tautomerase##CR456431|DDT|1652|D-dopachrome tautomerase##BC005971|DDT|1652|D-dopachrome tautomerase##BC015508|DDT|1652|D-dopachrome tautomerase##NM_001084392|DDT|1652|D-dopachrome tautomerase##NM_001144931|LOC391322|391322|D-dopachrome tautomerase-like##AF435971|GSTT1|2952|glutathione S-transferase theta 1##BT019951|GSTT1|2952|glutathione S-transferase theta 1##X79389|GSTT1|2952|glutathione S-transferase theta 1##DQ893480|GSTT1|2952|glutathione S-transferase theta 1##DQ896757|GSTT1|2952|glutathione S-transferase theta 1##CR456499|GSTT1|2952|glutathione S-transferase theta 1##AJ867757|GSTT1|2952|glutathione S-transferase theta 1##AJ867758|GSTT1|2952|glutathione S-transferase theta 1##AJ874719|GSTT1|2952|glutathione S-transferase theta 1##BC007065|GSTT1|2952|glutathione S-transferase theta 1##NM_000853|GSTT1|2952|glutathione S-transferase theta 1##AF072441|CABIN1|23523|calcineurin binding protein 1##NM_001201429|CABIN1|23523|calcineurin binding protein 1##NM_012295|CABIN1|23523|calcineurin binding protein 1##AK307522|CABIN1|23523|calcineurin binding protein 1##BC054497|CABIN1|23523|calcineurin binding protein 1	0.368716	CTCF.p2:50:0.369
chr5	24110262	24110389	reg1035432.p1	4.216	+	DQ388610 NM_020227 AK301776	-602582	+	L33477 NM_004061	-1256595	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-1256879	-	NM_006727	534759	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	2928346	-	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	3362078	+	DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401	0.907066	CTCF.p2:-5:0.907
chr6	70439834	70440015	reg1034882.p2	4.216	+	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	-1094523	+	AL833240 TSC_hg19_v1_chr6_-_69345026	-1094952	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	-1840896	-	TSC_hg19_v1_chr6_-_70506472 AB074281	66553	-	TSC_hg19_v1_chr6_-_70506524 AK290069	66604	-	AF113224 TSC_hg19_v1_chr6_-_70506799 BC010360 AK225537 AK002102 AK225187	66863	-	NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##AB074281|LMBRD1|55788|LMBR1 domain containing 1##AK290069|LMBRD1|55788|LMBR1 domain containing 1##AF113224|LMBRD1|55788|LMBR1 domain containing 1##BC010360|LMBRD1|55788|LMBR1 domain containing 1##AK225537|LMBRD1|55788|LMBR1 domain containing 1##AK002102|LMBRD1|55788|LMBR1 domain containing 1##AK225187|LMBRD1|55788|LMBR1 domain containing 1	0.918907	CTCF.p2:-2:0.919
chr8	103284802	103284938	reg1031094.p2	4.216	+	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-33697	-	NM_001040630	-147736	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	-148347	-	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	140041	-	NM_024410 AK315276 BC104456 BC104457	278991	+	BC011538 NM_001032282 S81439	381222	-	AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001040630|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10	0.973951	CTCF.p2:1:0.974
chr12	60229047	60229207	reg1014115.p2	4.215	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	-145988	+	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	-239210	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-914825	-	BC050347 NM_178539	2357456	-	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	2425057	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	2631452	+	BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)	0.0	
chr16	10974204	10974299	reg1035510.p1	4.215	+	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	-3139	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	-61703	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-136547	+	BC071683 TSC_hg19_v1_chr16_-_11036171	61915	-	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	61984	-	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	64192	+	AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##BC071683|DEXI|28955|Dexi homolog (mouse)##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A	0.0	
chr17	885294	885417	reg1003417.p3	4.215	+	TSC_hg19_v1_chr17_-_882986 AB590045 NM_022463	-2355	-	BC009327 AK302073 NM_001205319	-118037	-	BC011550 TSC_hg19_v1_chr17_+_685611 BC050614 AK225128 AB590841 CU679954 CU690740	-199741	+	TSC_hg19_v1_chr17_+_900368 BC002324 NM_013337 AK000830 AK225453 AF155330	15000	+	TSC_hg19_v1_chr17_-_982210 AK299909	96870	-	AK295191 TSC_hg19_v1_chr17_-_1012323 NM_001092 BC036807	126954	-	NM_022463|NXN|64359|nucleoredoxin##BC009327|NXN|64359|nucleoredoxin##AK302073|NXN|64359|nucleoredoxin##NM_001205319|NXN|64359|nucleoredoxin##BC011550|RNMTL1|55178|RNA methyltransferase like 1##BC050614|RNMTL1|55178|RNA methyltransferase like 1##AK225128|RNMTL1|55178|RNA methyltransferase like 1##BC002324|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##NM_013337|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK000830|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK225453|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AF155330|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK299909|ABR|29|active BCR-related gene##AK295191|ABR|29|active BCR-related gene##NM_001092|ABR|29|active BCR-related gene##BC036807|ABR|29|active BCR-related gene	0.012511	
chr18	3449197	3449374	reg1030750.p2	4.215	+	NM_173207 AK291112	-1668	+	NM_174886	-37214	+	NM_001144944 NM_001144945	-186622	+	NM_173209 NM_173208 TSC_hg19_v1_chr18_+_3450174 NM_003244 AK309471 X89750	795	+	TSC_hg19_v1_chr18_+_3451599 NM_170695 NM_173210 AK307230 BC031268	2346	+	NM_173211	4486	+	NM_173207|TGIF1|7050|TGFB-induced factor homeobox 1##AK291112|TGIF1|7050|TGFB-induced factor homeobox 1##NM_174886|TGIF1|7050|TGFB-induced factor homeobox 1##NM_001144944|MYL12B|103910|myosin, light chain 12B, regulatory##NM_001144945|MYL12B|103910|myosin, light chain 12B, regulatory##NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1##NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1##AK309471|TGIF1|7050|TGFB-induced factor homeobox 1##X89750|TGIF1|7050|TGFB-induced factor homeobox 1##NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1##BC031268|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1	0.0	
chr22	17739159	17739243	reg1026580.p2	4.215	+	AK314321 TSC_hg19_v1_chr22_-_17700267 AK295174 AK292689	-38838	-	AF190746 NM_017424	-48423	-	TSC_hg19_v1_chr22_-_17680487 AK027682 AK074702 NM_177405	-58687	-	TSC_hg19_v1_chr22_-_17747522 AF277398	8370	-	TSC_hg19_v1_chr22_+_18043149 AJ428203 AY008285 NM_031481 BC031644 AK308974 AK095706 AK309110	304018	+	BT007128 CU012943 CU013231 EU831478 EU831565 AB528072 CR456385 X71491 TSC_hg19_v1_chr22_-_18111488 X76228 BC004443	372244	-	AK314321|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK295174|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK292689|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF190746|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_017424|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK027682|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK074702|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_177405|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF277398|CECR3|27442|cat eye syndrome chromosome region, candidate 3 (non-protein coding)##AJ428203|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AY008285|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##NM_031481|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BC031644|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK308974|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK095706|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK309110|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BT007128|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU012943|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU013231|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831478|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831565|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CR456385|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X71491|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X76228|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##BC004443|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1	0.0	
chr2	60742862	60743042	reg1026722.p1	4.215	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-2274470	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-2468964	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-2469198	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	37570	-	AF080216 TSC_hg19_v1_chr2_-_60780784	37826	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	240532	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.01524	
chr2	714550	714690	reg1006791.p2	4.215	+	TSC_hg19_v1_chr2_-_677406 BC016010 AL137269 NM_152834	-37209	-	BC033490 NM_001002919	-426376	-	TSC_hg19_v1_chr2_+_264946 NM_001040649 NM_004300 NM_007099 AK289934 M83653 BC020699 AK291861 BC007422 AB209838 BC106011 AB385551 BT007136 Y16846 M83654 M87546 S62885	-449708	+	TSC_hg19_v1_chr2_+_946534 BC035783 NM_018968 AJ003029 BC125251	231959	+	BC063107 NM_000547 NM_001206744 NM_001206745 NM_175719 BC095448 M17755 J02969 J02970 X17358 Y00406	702635	+	NM_175721 NM_175722 AF439430 CU687644	703559	+	BC016010|TMEM18|129787|transmembrane protein 18##AL137269|TMEM18|129787|transmembrane protein 18##NM_152834|TMEM18|129787|transmembrane protein 18##BC033490|FAM150B|285016|family with sequence similarity 150, member B##NM_001002919|FAM150B|285016|family with sequence similarity 150, member B##NM_001040649|ACP1|52|acid phosphatase 1, soluble##NM_004300|ACP1|52|acid phosphatase 1, soluble##NM_007099|ACP1|52|acid phosphatase 1, soluble##AK289934|ACP1|52|acid phosphatase 1, soluble##M83653|ACP1|52|acid phosphatase 1, soluble##BC020699|ACP1|52|acid phosphatase 1, soluble##AK291861|ACP1|52|acid phosphatase 1, soluble##BC007422|ACP1|52|acid phosphatase 1, soluble##AB209838|ACP1|52|acid phosphatase 1, soluble##BC106011|ACP1|52|acid phosphatase 1, soluble##BT007136|ACP1|52|acid phosphatase 1, soluble##Y16846|ACP1|52|acid phosphatase 1, soluble##M83654|ACP1|52|acid phosphatase 1, soluble##M87546|ACP1|52|acid phosphatase 1, soluble##S62885|ACP1|52|acid phosphatase 1, soluble##BC035783|SNTG2|54221|syntrophin, gamma 2##NM_018968|SNTG2|54221|syntrophin, gamma 2##AJ003029|SNTG2|54221|syntrophin, gamma 2##BC125251|SNTG2|54221|syntrophin, gamma 2##BC063107|TPO|7173|thyroid peroxidase##NM_000547|TPO|7173|thyroid peroxidase##NM_001206744|TPO|7173|thyroid peroxidase##NM_001206745|TPO|7173|thyroid peroxidase##NM_175719|TPO|7173|thyroid peroxidase##BC095448|TPO|7173|thyroid peroxidase##M17755|TPO|7173|thyroid peroxidase##J02969|TPO|7173|thyroid peroxidase##J02970|TPO|7173|thyroid peroxidase##X17358|TPO|7173|thyroid peroxidase##Y00406|TPO|7173|thyroid peroxidase##NM_175721|TPO|7173|thyroid peroxidase##NM_175722|TPO|7173|thyroid peroxidase##AF439430|TPO|7173|thyroid peroxidase	0.0	
chr5	133332431	133332572	reg1032202.p1	4.215	+	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	-28126	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	-384263	-	TSC_hg19_v1_chr5_-_132948202 AK055684	-384302	-	TSC_hg19_v1_chr5_-_133340377 BC008482	7866	-	TSC_hg19_v1_chr5_-_133340386 BC090042	7882	-	TSC_hg19_v1_chr5_-_133340397 BC071168 AK293639	7900	-	DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##AK055684|FSTL4|23105|follistatin-like 4##BC008482|VDAC1|7416|voltage-dependent anion channel 1##BC090042|VDAC1|7416|voltage-dependent anion channel 1##BC071168|VDAC1|7416|voltage-dependent anion channel 1##AK293639|VDAC1|7416|voltage-dependent anion channel 1	0.786649	CTCF.p2:22:0.787
chr6	106049513	106049654	reg1026997.p1	4.215	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-198588	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-198625	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-198737	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	484613	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	484652	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	497221	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.0	
chr6	36618731	36618911	reg1034111.p1	4.215	+	TSC_hg19_v1_chr6_+_36562140 AK304097 D28423 BC000914 BC069018 AF107405	-56641	+	TSC_hg19_v1_chr6_+_36562138 AK312553	-56685	+	NM_003017 TSC_hg19_v1_chr6_+_36562093	-56730	+	NM_001220777 NM_078467	25430	+	NM_000389 TSC_hg19_v1_chr6_+_36646486 AK309512 NM_001220778 U09579	27650	+	TSC_hg19_v1_chr6_+_36646490 BC013967 AB209881 BC001935 BC000312 L25610 L26165 U03106 S67388 BC000275 L47232 L47233 AY008263	27704	+	AK304097|SRSF3|6428|serine/arginine-rich splicing factor 3##BC000914|SRSF3|6428|serine/arginine-rich splicing factor 3##BC069018|SRSF3|6428|serine/arginine-rich splicing factor 3##AF107405|SRSF3|6428|serine/arginine-rich splicing factor 3##AK312553|SRSF3|6428|serine/arginine-rich splicing factor 3##NM_003017|SRSF3|6428|serine/arginine-rich splicing factor 3##NM_001220777|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_078467|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_000389|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK309512|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_001220778|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U09579|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC013967|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AB209881|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC001935|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000312|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L25610|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L26165|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U03106|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##S67388|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000275|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47232|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47233|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)	0.0	
chr9	115096042	115096133	reg1016374.p1	4.215	+	TSC_hg19_v1_chr9_-_115095957 NM_001163788 NM_001163790 NM_001244896 NM_001244897 NM_005156	-114	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	-238	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	-800	-	NM_001195822 NM_032303 AK098721 TSC_hg19_v1_chr9_+_115142387 AY093428 BC004331 AK289929 AK292486 AK313605 AK225946 AK303645 AK301469	46203	+	TSC_hg19_v1_chr9_+_115142411 BC095451 CU678670	46331	+	TSC_hg19_v1_chr9_+_115249149 AK096613 NM_133465	153075	+	NM_001163788|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001163790|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244896|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244897|PTBP3|9991|polypyrimidine tract binding protein 3##NM_005156|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001195822|HSDL2|84263|hydroxysteroid dehydrogenase like 2##NM_032303|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK098721|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AY093428|HSDL2|84263|hydroxysteroid dehydrogenase like 2##BC004331|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK289929|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK292486|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK313605|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK225946|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK303645|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK301469|HSDL2|84263|hydroxysteroid dehydrogenase like 2##BC095451|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK096613|KIAA1958|158405|KIAA1958##NM_133465|KIAA1958|158405|KIAA1958	0.025701	
chr1	106565071	106565202	reg1030404.p1	4.214	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-2272634	+	NM_001008221 AK292341	-2272858	+	AK292341 NM_001008221	-2326065	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	1034229	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	1117606	+	AB023193 TSC_hg19_v1_chr1_+_107683657	1118468	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.996488	CTCF.p2:-24:0.996
chr1	207030326	207030425	reg1028232.p2	4.214	+	AF453946 NM_013371	-28154	+	AY040367 NM_153758 AB463800	-58149	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-84496	-	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	8800	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	40425	+	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	64912	-	AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24##BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3	0.207621	CTCF.p2:-15:0.208
chr15	100105879	100106006	reg1020788.p1	4.214	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-314300	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-314526	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-316236	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	211	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	252	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	293	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.0	
chr17	75449934	75450019	reg1029060.p1	4.214	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-2587	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-3194	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	-3331	+	AK056495 NM_001113495	21348	+	TSC_hg19_v1_chr17_+_75543021 AK096234	93044	+	BC039479 NM_001142640 NM_018996	550306	+	AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C	0.023549	
chr20	17592157	17592241	reg1028383.p2	4.214	+	NM_001011546 NM_006870 TSC_hg19_v1_chr20_+_17550756 AK315994 BC009477 AK312645 BX647319 S65738 AK302338	-41460	+	AK316247 BC041483 NM_001161705	-52657	-	AF039655 Y16717 TSC_hg19_v1_chr20_-_17512006 NM_001195	-80207	-	TSC_hg19_v1_chr20_-_17641123 AB287347 AB384598	48937	-	BC128578 BC128577 TSC_hg19_v1_chr20_-_17662793 AF006751	70566	-	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	70684	-	NM_001011546|DSTN|11034|destrin (actin depolymerizing factor)##NM_006870|DSTN|11034|destrin (actin depolymerizing factor)##AK315994|DSTN|11034|destrin (actin depolymerizing factor)##BC009477|DSTN|11034|destrin (actin depolymerizing factor)##AK312645|DSTN|11034|destrin (actin depolymerizing factor)##BX647319|DSTN|11034|destrin (actin depolymerizing factor)##S65738|DSTN|11034|destrin (actin depolymerizing factor)##AK302338|DSTN|11034|destrin (actin depolymerizing factor)##AK316247|BFSP1|631|beaded filament structural protein 1, filensin##BC041483|BFSP1|631|beaded filament structural protein 1, filensin##NM_001161705|BFSP1|631|beaded filament structural protein 1, filensin##AF039655|BFSP1|631|beaded filament structural protein 1, filensin##Y16717|BFSP1|631|beaded filament structural protein 1, filensin##NM_001195|BFSP1|631|beaded filament structural protein 1, filensin##AB287347|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128578|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128577|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AF006751|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)	0.034261	
chr4	38321448	38321514	reg1006854.p2	4.214	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-342464	+	AF095288 BC069114 BC069400 NM_006607	-359426	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-428692	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	344345	+	AF289565 TSC_hg19_v1_chr4_-_38666549	345008	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	463118	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr5	43631566	43631657	reg1032228.p2	4.214	+	Z50101 AB385177 AM392664 AM393615 TSC_hg19_v1_chr5_+_43609371	-22295	+	TSC_hg19_v1_chr5_+_43603313 BC110543 BC110544	-28257	+	TSC_hg19_v1_chr5_+_43603303 AK299622 U40490	-28312	+	AF508782 AB002097 AF411527 BC069561 CR541665 CR541688 GQ351295 HQ258011 NM_004465 U67918 BC105023 BC105021 BC143772	757154	-	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	1177416	+	AF064876 TSC_hg19_v1_chr5_-_45695947	2064280	-	Z50101|NNT|23530|nicotinamide nucleotide transhydrogenase##AM392664|NNT|23530|nicotinamide nucleotide transhydrogenase##AM393615|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110543|NNT|23530|nicotinamide nucleotide transhydrogenase##BC110544|NNT|23530|nicotinamide nucleotide transhydrogenase##AK299622|NNT|23530|nicotinamide nucleotide transhydrogenase##U40490|NNT|23530|nicotinamide nucleotide transhydrogenase##AF508782|FGF10|2255|fibroblast growth factor 10##AB002097|FGF10|2255|fibroblast growth factor 10##AF411527|FGF10|2255|fibroblast growth factor 10##BC069561|FGF10|2255|fibroblast growth factor 10##CR541665|FGF10|2255|fibroblast growth factor 10##CR541688|FGF10|2255|fibroblast growth factor 10##GQ351295|FGF10|2255|fibroblast growth factor 10##HQ258011|FGF10|2255|fibroblast growth factor 10##NM_004465|FGF10|2255|fibroblast growth factor 10##U67918|FGF10|2255|fibroblast growth factor 10##BC105023|FGF10|2255|fibroblast growth factor 10##BC105021|FGF10|2255|fibroblast growth factor 10##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1	0.998433	CTCF.p2:9:0.998
chr12	120755230	120755353	reg1034359.p1	4.213	+	NM_012240 TSC_hg19_v1_chr12_+_120740123 BC034736 AF083109 BC109319 BC109320	-15149	+	TSC_hg19_v1_chr12_-_120703574 NM_001080855 NM_001243756 NM_002859	-51701	-	TSC_hg19_v1_chr12_-_120703534 AK299486 BC136787 BC136794 BC144410 U14588 AB209034 AK298057 AK314204	-51777	-	AB464016 EU832774 GQ129318 AK311830 BC005386 BC013384 BC106725 BC106726 M21054 NM_000928	10282	-	AB463899 AB012851 NM_002442 TSC_hg19_v1_chr12_-_120806968	51645	-	TSC_hg19_v1_chr12_+_120875920 AK312009 NM_004373 BC107861 BC070186 BC007723 DQ893099 DQ896371	120619	+	NM_012240|SIRT4|23409|sirtuin 4##BC034736|SIRT4|23409|sirtuin 4##AF083109|SIRT4|23409|sirtuin 4##BC109319|SIRT4|23409|sirtuin 4##BC109320|SIRT4|23409|sirtuin 4##NM_001080855|PXN|5829|paxillin##NM_001243756|PXN|5829|paxillin##NM_002859|PXN|5829|paxillin##AK299486|PXN|5829|paxillin##BC136787|PXN|5829|paxillin##BC136794|PXN|5829|paxillin##BC144410|PXN|5829|paxillin##U14588|PXN|5829|paxillin##AB209034|PXN|5829|paxillin##AK298057|PXN|5829|paxillin##AK314204|PXN|5829|paxillin##EU832774|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##GQ129318|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##AK311830|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC005386|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC013384|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106725|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106726|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##M21054|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##NM_000928|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##AB012851|MSI1|4440|musashi homolog 1 (Drosophila)##NM_002442|MSI1|4440|musashi homolog 1 (Drosophila)##AK312009|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##NM_004373|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC107861|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC070186|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC007723|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ893099|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ896371|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1	0.169436	
chr12	97379289	97379355	reg1009923.p1	4.213	+	BC027605 NM_001135175	-78079	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-78291	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-585005	-	TSC_hg19_v1_chr12_-_98897622 AK126817	1518305	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	1530045	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	1530085	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.474698	
chr1	85439662	85439842	reg1019448.p2	4.213	+	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	-80866	-	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-283676	-	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-399646	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	22956	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	74393	-	TSC_hg19_v1_chr1_-_85514184 BX647497 AK314354 NM_001253693 NM_018298	74446	-	AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3##BX647497|MCOLN3|55283|mucolipin 3##AK314354|MCOLN3|55283|mucolipin 3##NM_001253693|MCOLN3|55283|mucolipin 3##NM_018298|MCOLN3|55283|mucolipin 3	0.0	
chr19	46027216	46027363	reg1002457.p2	4.213	+	TSC_hg19_v1_chr19_+_46010748 BC026019 BC038224 Z46389	-16516	+	TSC_hg19_v1_chr19_+_46010736 AK314812	-16566	+	TSC_hg19_v1_chr19_+_46010688 NM_003370	-16601	+	AB528200 AM392686 EU832556 TSC_hg19_v1_chr19_-_46088061 BC064146 BC005059 BC047316	60753	-	TSC_hg19_v1_chr19_-_46088075 AK025840	60789	-	TSC_hg19_v1_chr19_-_46088084 AK098798 NM_001017989 NM_025136	60815	-	BC026019|VASP|7408|vasodilator-stimulated phosphoprotein##BC038224|VASP|7408|vasodilator-stimulated phosphoprotein##Z46389|VASP|7408|vasodilator-stimulated phosphoprotein##AK314812|VASP|7408|vasodilator-stimulated phosphoprotein##NM_003370|VASP|7408|vasodilator-stimulated phosphoprotein##AM392686|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##EU832556|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC064146|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC005059|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##BC047316|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##AK025840|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##AK098798|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##NM_001017989|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)##NM_025136|OPA3|80207|optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)	0.0	
chr20	38509700	38509805	reg1030278.p1	4.213	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-918763	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-954684	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-954763	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	808125	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1147742	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1147912	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.605538	CTCF.p2:16:0.606
chr22	22550161	22550341	reg1002064.p2	4.213	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	-73	+	X02422 TSC_hg19_v1_chr22_+_22550141	-122	+	TSC_hg19_v1_chr22_+_22385369 AF026922	-164886	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	19013	+	BC017922 NM_007128 CR456609 CU013205 CU013493 AB590106	48960	+	TSC_hg19_v1_chr22_+_22652513 BC033148 AK090629 AX746545 BX641141	102268	+	BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57##BC017922|VPREB1|7441|pre-B lymphocyte 1##NM_007128|VPREB1|7441|pre-B lymphocyte 1##CR456609|VPREB1|7441|pre-B lymphocyte 1##CU013205|VPREB1|7441|pre-B lymphocyte 1##CU013493|VPREB1|7441|pre-B lymphocyte 1##BC033148|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##AK090629|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene##BX641141|LOC96610|96610|BMS1 homolog, ribosome assembly protein (yeast) pseudogene	0.0	
chr7	2595207	2595318	reg1034716.p1	4.213	+	TSC_hg19_v1_chr7_-_2595139 AK024482 BC015632	-134	-	TSC_hg19_v1_chr7_+_2559407 NM_001040167 NM_001040168	-35825	+	BC014851 NM_002304	-37766	+	AK131083 TSC_hg19_v1_chr7_-_2595352 NM_152743	103	-	TSC_hg19_v1_chr7_+_2598633 BC071858 NM_001100390 NM_152558	3365	+	TSC_hg19_v1_chr7_+_2598649 AK302053	3393	+	AK024482|BRAT1|221927|BRCA1-associated ATM activator 1##BC015632|BRAT1|221927|BRCA1-associated ATM activator 1##NM_001040167|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001040168|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC014851|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002304|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK131083|BRAT1|221927|BRCA1-associated ATM activator 1##NM_152743|BRAT1|221927|BRCA1-associated ATM activator 1##BC071858|IQCE|23288|IQ motif containing E##NM_001100390|IQCE|23288|IQ motif containing E##NM_152558|IQCE|23288|IQ motif containing E##AK302053|IQCE|23288|IQ motif containing E	0.058903	
chr7	41932070	41932158	reg1043058.p1	4.213	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-189429	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1757505	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1757583	+	NM_000168	344503	-	TSC_hg19_v1_chr7_-_42276797 AK308429	344681	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	1019475	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.460012	CTCF.p2:30:0.460
chr9	35756686	35756800	reg1031627.p1	4.213	+	DQ012170 BC071800 BC105274 NM_001044264	-2471	-	TSC_hg19_v1_chr9_+_35749334 D87447 BC001725	-7407	+	NM_001080496 TSC_hg19_v1_chr9_+_35749276 AK289566	-7462	+	AJ005282 NM_003995	35662	+	DQ890798 EU176503 BC019247 AK302313 NM_001039592 NM_172312 S83157 U12978	55457	-	TSC_hg19_v1_chr9_-_35815018 AK222582 AF356515 AY033094 AF356875 BC047737 AF085236	58269	-	DQ012170|MSMP|692094|microseminoprotein, prostate associated##BC071800|MSMP|692094|microseminoprotein, prostate associated##BC105274|MSMP|692094|microseminoprotein, prostate associated##NM_001044264|MSMP|692094|microseminoprotein, prostate associated##D87447|RGP1|9827|RGP1 retrograde golgi transport homolog (S. cerevisiae)##BC001725|RGP1|9827|RGP1 retrograde golgi transport homolog (S. cerevisiae)##NM_001080496|RGP1|9827|RGP1 retrograde golgi transport homolog (S. cerevisiae)##AK289566|RGP1|9827|RGP1 retrograde golgi transport homolog (S. cerevisiae)##AJ005282|NPR2|4882|natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B)##NM_003995|NPR2|4882|natriuretic peptide receptor B/guanylate cyclase B (atrionatriuretic peptide receptor B)##DQ890798|SPAG8|26206|sperm associated antigen 8##EU176503|SPAG8|26206|sperm associated antigen 8##BC019247|SPAG8|26206|sperm associated antigen 8##AK302313|SPAG8|26206|sperm associated antigen 8##NM_001039592|SPAG8|26206|sperm associated antigen 8##NM_172312|SPAG8|26206|sperm associated antigen 8##S83157|SPAG8|26206|sperm associated antigen 8##U12978|SPAG8|26206|sperm associated antigen 8##AK222582|HINT2|84681|histidine triad nucleotide binding protein 2##AF356515|HINT2|84681|histidine triad nucleotide binding protein 2##AY033094|HINT2|84681|histidine triad nucleotide binding protein 2##AF356875|HINT2|84681|histidine triad nucleotide binding protein 2##BC047737|HINT2|84681|histidine triad nucleotide binding protein 2##AF085236|HINT2|84681|histidine triad nucleotide binding protein 2	0.035625	
chrX	137008370	137008489	reg1033829.p2	4.213	+	EU532020 TSC_hg19_v1_chrX_+_136648691 BC113393 BC113395 AB464363 HQ258447	-359662	+	TSC_hg19_v1_chrX_+_136648313 AF028706 NM_003413	-360100	+	BC069439 NM_054021 CU686814	-894594	-	AF100143 TSC_hg19_v1_chrX_-_137793504 AK289960 BC034340	785025	-	BC012347 NM_004114 TSC_hg19_v1_chrX_-_137793839	785408	-	AF100144 NM_033642	813085	-	EU532020|ZIC3|7547|Zic family member 3##BC113393|ZIC3|7547|Zic family member 3##BC113395|ZIC3|7547|Zic family member 3##HQ258447|ZIC3|7547|Zic family member 3##AF028706|ZIC3|7547|Zic family member 3##NM_003413|ZIC3|7547|Zic family member 3##BC069439|GPR101|83550|G protein-coupled receptor 101##NM_054021|GPR101|83550|G protein-coupled receptor 101##AF100143|FGF13|2258|fibroblast growth factor 13##AK289960|FGF13|2258|fibroblast growth factor 13##BC034340|FGF13|2258|fibroblast growth factor 13##BC012347|FGF13|2258|fibroblast growth factor 13##NM_004114|FGF13|2258|fibroblast growth factor 13##AF100144|FGF13|2258|fibroblast growth factor 13##NM_033642|FGF13|2258|fibroblast growth factor 13	0.97664	CTCF.p2:27:0.977
chr11	117686084	117686166	reg1034513.p2	4.212	+	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	-18166	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	-18272	-	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-487294	+	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	9309	-	BT006721 BC005302 NM_021603	12641	-	AL136699 TSC_hg19_v1_chr11_-_117747374 AY358976 BC018652 BC093040 AK311736 AL832811 AK290757	61264	-	AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2##BT006721|FXYD2|486|FXYD domain containing ion transport regulator 2##BC005302|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_021603|FXYD2|486|FXYD domain containing ion transport regulator 2##AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6##AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6	0.187458	
chr11	121192630	121192810	reg1005705.p2	4.212	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	-29166	+	TSC_hg19_v1_chr11_+_121163484 AK096847 AK223141 AK222686	-29238	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	-29315	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	130229	+	TSC_hg19_v1_chr11_+_121323112 AK309523	130455	+	TSC_hg19_v1_chr11_+_121461071 AK294404	268378	+	BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK096847|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK223141|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK222686|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing	0.0	
chr16	86018771	86018952	reg1032680.p1	4.212	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-86075	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-185526	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-185556	+	TSC_hg19_v1_chr16_-_86542463 AK091834	523603	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	525295	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	525379	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.0	
chr17	70362115	70362249	reg1034237.p2	4.212	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-244942	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-245012	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-245023	+	AK000477 TSC_hg19_v1_chr17_-_70588944	226761	-	AF331643 TSC_hg19_v1_chr17_-_71088816	726634	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	726641	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr20	45648967	45649106	reg1031752.p1	4.212	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	-125484	+	TSC_hg19_v1_chr20_+_45523505 BC008803	-125528	+	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	-125754	+	TSC_hg19_v1_chr20_-_45927496 BC030721	278533	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	327611	-	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	336452	-	AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8	0.0	
chr4	78079269	78079449	reg1030715.p1	4.212	+	TSC_hg19_v1_chr4_+_78078398 U47414	-899	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	-998	+	TSC_hg19_v1_chr4_-_77997145 BC000420 BC004975 NM_006835 AB209766 AK301111 AK312632	-82207	-	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	134	+	AF044197 NM_006419	353546	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	661185	-	U47414|CCNG2|901|cyclin G2##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##BC000420|CCNI|10983|cyclin I##BC004975|CCNI|10983|cyclin I##NM_006835|CCNI|10983|cyclin I##AB209766|CCNI|10983|cyclin I##AK301111|CCNI|10983|cyclin I##AK312632|CCNI|10983|cyclin I##L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like	0.0	
chr5	138529739	138529845	reg1034383.p1	4.212	+	HQ589335 TSC_hg19_v1_chr5_+_138211097	-318701	+	TSC_hg19_v1_chr5_-_138211057 NM_015564	-318733	-	AK309790 TSC_hg19_v1_chr5_-_138211025 AB007876 BC028172 AK291064 AK297332	-318779	-	AF547994 TSC_hg19_v1_chr5_-_138533996 AK075177	4197	-	TSC_hg19_v1_chr5_-_138533998 AY358950 BC011568	4216	-	TSC_hg19_v1_chr5_-_138534058 AJ299442 AK074624 NM_001037633 NM_022464	4254	-	HQ589335|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AF547994|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK075177|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AY358950|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##BC011568|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AJ299442|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK074624|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_001037633|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_022464|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)	0.0	
chr11	34176023	34176203	reg1024294.p2	4.211	+	TSC_hg19_v1_chr11_+_34127208 AK294044 AL136882 AK001636 BC014440 BC020205	-48863	+	NM_001144030 NM_024662 TSC_hg19_v1_chr11_+_34127175 AK022241 AK225341 BC035558 AB051496	-48956	+	TSC_hg19_v1_chr11_+_34073956 EU176359 EU176467 EU176701	-102076	+	TSC_hg19_v1_chr11_-_34379556 AK291744 NM_145804	203442	-	TSC_hg19_v1_chr11_+_34460487 AK291585 NM_001752 BC110398 AK315350 X04076 BC112217 BC112219	284361	+	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	284436	+	AK294044|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AL136882|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK001636|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC014440|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC020205|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_001144030|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_024662|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK022241|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK225341|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC035558|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AB051496|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##EU176359|CAPRIN1|4076|cell cycle associated protein 1##EU176467|CAPRIN1|4076|cell cycle associated protein 1##EU176701|CAPRIN1|4076|cell cycle associated protein 1##AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##AK291585|CAT|847|catalase##NM_001752|CAT|847|catalase##BC110398|CAT|847|catalase##AK315350|CAT|847|catalase##X04076|CAT|847|catalase##BC112217|CAT|847|catalase##BC112219|CAT|847|catalase##AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase	0.05734	
chr11	43042758	43042907	reg1017807.p1	4.211	+	AB046800 NM_020929	-2727169	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-2728238	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-6423030	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	290686	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	290732	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	290808	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.069621	
chr1	22083203	22083383	reg1031375.p2	4.211	+	AB007943 M64788 TSC_hg19_v1_chr1_-_21995851 NM_001145657 NM_002885	-87460	-	BC054490 TSC_hg19_v1_chr1_-_21978334 NM_001145658	-104946	-	AB003930 TSC_hg19_v1_chr1_-_21949064	-134256	-	CU679968 AB384973 AK315005 BC104896 BC143343 BC143349 BC143354 TSC_hg19_v1_chr1_-_22109586 AK074247 AF502942 BC011576	26232	-	TSC_hg19_v1_chr1_-_22109643 BC103724 BC067261	26341	-	TSC_hg19_v1_chr1_-_22109701 AK026930 NM_001032730 NM_032236	26406	-	AB007943|RAP1GAP|5909|RAP1 GTPase activating protein##M64788|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145657|RAP1GAP|5909|RAP1 GTPase activating protein##NM_002885|RAP1GAP|5909|RAP1 GTPase activating protein##BC054490|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145658|RAP1GAP|5909|RAP1 GTPase activating protein##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein##AK315005|USP48|84196|ubiquitin specific peptidase 48##BC104896|USP48|84196|ubiquitin specific peptidase 48##BC143343|USP48|84196|ubiquitin specific peptidase 48##BC143349|USP48|84196|ubiquitin specific peptidase 48##BC143354|USP48|84196|ubiquitin specific peptidase 48##AK074247|USP48|84196|ubiquitin specific peptidase 48##AF502942|USP48|84196|ubiquitin specific peptidase 48##BC011576|USP48|84196|ubiquitin specific peptidase 48##BC103724|USP48|84196|ubiquitin specific peptidase 48##BC067261|USP48|84196|ubiquitin specific peptidase 48##NM_001032730|USP48|84196|ubiquitin specific peptidase 48##NM_032236|USP48|84196|ubiquitin specific peptidase 48	0.0	
chr12	56074945	56075051	reg1033833.p1	4.211	+	BC136914 AB529283 NM_206899	-44339	+	BC137000 BC137001 NM_001005494	-130002	+	NM_001005519	-188837	+	AK290112 NM_152637 TSC_hg19_v1_chr12_+_56075356	345	+	BC020509 TSC_hg19_v1_chr12_+_56075425 AY358508	441	+	AF052050 AF072132 AY358882 TSC_hg19_v1_chr12_-_56101636 AF032108 AB210036	26562	-	BC136914|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1##NM_206899|OR10P1|121130|olfactory receptor, family 10, subfamily P, member 1##BC137000|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##BC137001|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##NM_001005494|OR6C4|341418|olfactory receptor, family 6, subfamily C, member 4##NM_001005519|OR6C68|403284|olfactory receptor, family 6, subfamily C, member 68##AK290112|METTL7B|196410|methyltransferase like 7B##NM_152637|METTL7B|196410|methyltransferase like 7B##BC020509|METTL7B|196410|methyltransferase like 7B##AY358508|METTL7B|196410|methyltransferase like 7B##AF052050|ITGA7|3679|integrin, alpha 7##AF072132|ITGA7|3679|integrin, alpha 7##AY358882|ITGA7|3679|integrin, alpha 7##AF032108|ITGA7|3679|integrin, alpha 7##AB210036|ITGA7|3679|integrin, alpha 7	0.298718	CTCF.p2:-4:0.299
chr13	50811084	50811265	reg1029299.p1	4.211	+	AJ412041 AJ412042 AJ412043 TSC_hg19_v1_chr13_+_50760088	-51121	+	TSC_hg19_v1_chr13_-_50699781 AF380424	-111359	-	AJ412023 AJ412024 AJ412025 AJ412026 AJ412038 AJ412039 AJ412054 AJ412055 AJ412056 AJ412057 AJ412058 AJ412059 AJ412060 AJ412061 AJ412062 Y15227 TSC_hg19_v1_chr13_+_50656364 BC004131 AK312167 BC020692 AK095311	-154829	+	AY357595 BC104892 BC112009 NM_198989 AK303567 AK126830	606778	-	NM_001142279 NM_024570 TSC_hg19_v1_chr13_+_51483898	672682	+	TSC_hg19_v1_chr13_+_51483905 AY764036	672730	+	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AJ412023|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412024|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412061|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412062|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##Y15227|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC020692|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AK095311|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7##AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_001142279|RNASEH2B|79621|ribonuclease H2, subunit B##NM_024570|RNASEH2B|79621|ribonuclease H2, subunit B##AY764036|RNASEH2B|79621|ribonuclease H2, subunit B	0.0	
chr17	38195271	38195384	reg1029423.p1	4.211	+	NM_000759 NM_001178147 NM_172219 NM_172220 AK290247 AK298116 M17706 AK313509 X03438 X03655 BC033245 AB591019 AB102881 CR541891	-23657	+	TSC_hg19_v1_chr17_+_38137216 AB385069 CU674020 CU676540 CU678776 CU680278 BT007217 CR456772	-58123	+	TSC_hg19_v1_chr17_+_38137115 BC000074 BC020518 BC025686 BC004859	-58185	+	TSC_hg19_v1_chr17_-_38210662 EU392536 EU392541 D50920 AK022508 AK303502 AK303745 AK291040 AK293309 AK299864 AK300992	15317	-	NM_001079518 NM_014815	15561	-	AK290530 NM_001190919 AB209346	23132	+	NM_000759|CSF3|1440|colony stimulating factor 3 (granulocyte)##NM_001178147|CSF3|1440|colony stimulating factor 3 (granulocyte)##NM_172219|CSF3|1440|colony stimulating factor 3 (granulocyte)##NM_172220|CSF3|1440|colony stimulating factor 3 (granulocyte)##AK290247|CSF3|1440|colony stimulating factor 3 (granulocyte)##AK298116|CSF3|1440|colony stimulating factor 3 (granulocyte)##M17706|CSF3|1440|colony stimulating factor 3 (granulocyte)##AK313509|CSF3|1440|colony stimulating factor 3 (granulocyte)##X03438|CSF3|1440|colony stimulating factor 3 (granulocyte)##X03655|CSF3|1440|colony stimulating factor 3 (granulocyte)##BC033245|CSF3|1440|colony stimulating factor 3 (granulocyte)##AB102881|CSF3|1440|colony stimulating factor 3 (granulocyte)##CR541891|CSF3|1440|colony stimulating factor 3 (granulocyte)##BT007217|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##CR456772|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC000074|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC020518|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC025686|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC004859|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##EU392536|MED24|9862|mediator complex subunit 24##EU392541|MED24|9862|mediator complex subunit 24##D50920|MED24|9862|mediator complex subunit 24##AK022508|MED24|9862|mediator complex subunit 24##AK303502|MED24|9862|mediator complex subunit 24##AK303745|MED24|9862|mediator complex subunit 24##AK291040|MED24|9862|mediator complex subunit 24##AK293309|MED24|9862|mediator complex subunit 24##AK299864|MED24|9862|mediator complex subunit 24##AK300992|MED24|9862|mediator complex subunit 24##NM_001079518|MED24|9862|mediator complex subunit 24##NM_014815|MED24|9862|mediator complex subunit 24##AK290530|THRA|7067|thyroid hormone receptor, alpha##NM_001190919|THRA|7067|thyroid hormone receptor, alpha##AB209346|THRA|7067|thyroid hormone receptor, alpha	0.83697	CTCF.p2:-11:0.837
chr19	38042741	38042876	reg1031600.p1	4.211	+	BC044917 BX647800 AL832315 NM_152606 BC063448 BC110871 BC126478 BC126480	-420	+	BX537524 TSC_hg19_v1_chr19_+_37998078 BC150303	-44728	+	AK131417 NM_001013659 AK303740	-44947	+	BC040591 AK055039 AK291413 BC113870 BC114479 AF161544 NM_016536 BX537401	42860	-	AL832100 NM_001172225 NM_001172226 BC017940 AK290486 AK122597 AL832687 BX537980	42950	+	BC041087 TSC_hg19_v1_chr19_-_38146369 BC050542 AB023178 NM_014898 AK297301	103547	-	BC044917|LOC100507433|100507433|uncharacterized LOC100507433##BX647800|LOC100507433|100507433|uncharacterized LOC100507433##AL832315|ZNF540|163255|zinc finger protein 540##NM_152606|ZNF540|163255|zinc finger protein 540##BC063448|LOC100507433|100507433|uncharacterized LOC100507433##BC110871|LOC100507433|100507433|uncharacterized LOC100507433##BC126478|ZNF540|163255|zinc finger protein 540##BC126480|ZNF540|163255|zinc finger protein 540##BX537524|ZNF793|390927|zinc finger protein 793##BC150303|ZNF793|390927|zinc finger protein 793##AK131417|ZNF793|390927|zinc finger protein 793##NM_001013659|ZNF793|390927|zinc finger protein 793##AK303740|ZNF793|390927|zinc finger protein 793##BC040591|ZNF571|51276|zinc finger protein 571##AK055039|ZNF571|51276|zinc finger protein 571##AK291413|ZNF571|51276|zinc finger protein 571##BC113870|ZNF571|51276|zinc finger protein 571##BC114479|ZNF571|51276|zinc finger protein 571##AF161544|ZNF571|51276|zinc finger protein 571##NM_016536|ZNF571|51276|zinc finger protein 571##BX537401|ZNF571|51276|zinc finger protein 571##AL832100|ZNF540|163255|zinc finger protein 540##NM_001172225|ZNF540|163255|zinc finger protein 540##NM_001172226|ZNF540|163255|zinc finger protein 540##BC017940|ZNF540|163255|zinc finger protein 540##AK290486|ZNF540|163255|zinc finger protein 540##AK122597|ZNF540|163255|zinc finger protein 540##AL832687|ZNF540|163255|zinc finger protein 540##BX537980|ZNF540|163255|zinc finger protein 540##BC041087|ZFP30|22835|zinc finger protein 30 homolog (mouse)##BC050542|ZFP30|22835|zinc finger protein 30 homolog (mouse)##AB023178|ZFP30|22835|zinc finger protein 30 homolog (mouse)##NM_014898|ZFP30|22835|zinc finger protein 30 homolog (mouse)##AK297301|ZFP30|22835|zinc finger protein 30 homolog (mouse)	0.881048	CTCF.p2:14:0.881
chr2	74347385	74347565	reg1027139.p3	4.211	+	NM_144993	-74026	+	TSC_hg19_v1_chr2_+_74154019 X97386	-193429	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-193475	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	27543	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	27745	+	AL122062 TSC_hg19_v1_chr2_-_74382411	34906	-	NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.016449	
chr4	91278427	91278551	reg1032053.p1	4.211	+	BC051694 NM_207491	-122308	+	AK097436 NM_001145065 AK310825 AB051467 BC021681	-229771	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-462427	+	AB209318 NM_001510 AK308611	1947103	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	3471572	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	3850322	+	BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	0.933453	CTCF.p2:-20:0.933
chr7	22862407	22862550	reg1034116.p2	4.211	+	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	-35	-	TSC_hg19_v1_chr7_+_22767104 X04403	-95360	+	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	-95655	+	AB030241 AK056319 AK297399 TSC_hg19_v1_chr7_-_23053708 AL833296	191217	-	TSC_hg19_v1_chr7_-_23053750 BC018710 NM_032581	191272	-	TSC_hg19_v1_chr7_+_23145396 NM_001031710 NM_001172428 AK297421 AK056390	282894	+	CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##AB030241|FAM126A|84668|family with sequence similarity 126, member A##AK056319|FAM126A|84668|family with sequence similarity 126, member A##AK297399|FAM126A|84668|family with sequence similarity 126, member A##AL833296|FAM126A|84668|family with sequence similarity 126, member A##BC018710|FAM126A|84668|family with sequence similarity 126, member A##NM_032581|FAM126A|84668|family with sequence similarity 126, member A##NM_001031710|KLHL7|55975|kelch-like 7 (Drosophila)##NM_001172428|KLHL7|55975|kelch-like 7 (Drosophila)##AK297421|KLHL7|55975|kelch-like 7 (Drosophila)##AK056390|KLHL7|55975|kelch-like 7 (Drosophila)	0.630673	CTCF.p2:46:0.631
chr1	160807127	160807194	reg1013168.p1	4.210	+	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	-41162	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-98096	+	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	-125574	-	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	25418	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	47798	-	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	117399	-	NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2	0.0	
chr15	63449496	63449595	reg1029023.p1	4.210	+	TSC_hg19_v1_chr15_+_63414037 AY358709 BC037198	-35492	+	NM_032857 NM_171846 BC067288 TSC_hg19_v1_chr15_+_63414026 AK027808	-35529	+	TSC_hg19_v1_chr15_+_63340667 AB209041 NM_001018008 BC053545 BC050473 AK301319 AK298625 AB385207 CU690980 DQ424903 EU832801 GQ129381 L02922 AF474156	-108856	+	BC031307 TSC_hg19_v1_chr15_-_63449677 AF070668 BC003667 BC047648 AK024591 NM_015920	64	-	TSC_hg19_v1_chr15_+_63481724 NM_016530 AB038995	32184	+	TSC_hg19_v1_chr15_+_63481804 AK001111 AK095444 AK297598 AL833365 BC020654 AB464123 CU676608	32260	+	AY358709|LACTB|114294|lactamase, beta##BC037198|LACTB|114294|lactamase, beta##NM_032857|LACTB|114294|lactamase, beta##NM_171846|LACTB|114294|lactamase, beta##BC067288|LACTB|114294|lactamase, beta##AK027808|LACTB|114294|lactamase, beta##AB209041|TPM1|7168|tropomyosin 1 (alpha)##NM_001018008|TPM1|7168|tropomyosin 1 (alpha)##BC053545|TPM1|7168|tropomyosin 1 (alpha)##BC050473|TPM1|7168|tropomyosin 1 (alpha)##AK301319|TPM1|7168|tropomyosin 1 (alpha)##AK298625|TPM1|7168|tropomyosin 1 (alpha)##DQ424903|TPM1|7168|tropomyosin 1 (alpha)##EU832801|TPM1|7168|tropomyosin 1 (alpha)##GQ129381|TPM1|7168|tropomyosin 1 (alpha)##L02922|TPM1|7168|tropomyosin 1 (alpha)##AF474156|TPM1|7168|tropomyosin 1 (alpha)##BC031307|RPS27L|51065|ribosomal protein S27-like##AF070668|RPS27L|51065|ribosomal protein S27-like##BC003667|RPS27L|51065|ribosomal protein S27-like##BC047648|RPS27L|51065|ribosomal protein S27-like##AK024591|RPS27L|51065|ribosomal protein S27-like##NM_015920|RPS27L|51065|ribosomal protein S27-like##NM_016530|RAB8B|51762|RAB8B, member RAS oncogene family##AB038995|RAB8B|51762|RAB8B, member RAS oncogene family##AK001111|RAB8B|51762|RAB8B, member RAS oncogene family##AK095444|RAB8B|51762|RAB8B, member RAS oncogene family##AK297598|RAB8B|51762|RAB8B, member RAS oncogene family##AL833365|RAB8B|51762|RAB8B, member RAS oncogene family##BC020654|RAB8B|51762|RAB8B, member RAS oncogene family	0.0	
chr5	77656068	77656171	reg1029095.p1	4.210	+	TSC_hg19_v1_chr5_-_77590517 BC020230 BX538041 BC038444 AK291201 NM_003664	-65605	-	TSC_hg19_v1_chr5_-_77590495 U81504	-65627	-	TSC_hg19_v1_chr5_-_77590488 AY623424 AK303300	-65642	-	BC039455 TSC_hg19_v1_chr5_-_77656182	62	-	TSC_hg19_v1_chr5_-_77656217 AK129849	96	-	NM_004866 TSC_hg19_v1_chr5_+_77656440 AF038966 AK304452 AK225172 BC009787 BC015065 AK298146 BC034048 AK290225 CR542286 CU677209	297	+	BC020230|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##BX538041|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##BC038444|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK291201|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##NM_003664|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U81504|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AY623424|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK303300|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK129849|LOC728769|728769|uncharacterized LOC728769##NM_004866|SCAMP1|9522|secretory carrier membrane protein 1##AF038966|SCAMP1|9522|secretory carrier membrane protein 1##AK304452|SCAMP1|9522|secretory carrier membrane protein 1##AK225172|SCAMP1|9522|secretory carrier membrane protein 1##BC009787|SCAMP1|9522|secretory carrier membrane protein 1##BC015065|SCAMP1|9522|secretory carrier membrane protein 1##AK298146|SCAMP1|9522|secretory carrier membrane protein 1##BC034048|SCAMP1|9522|secretory carrier membrane protein 1##AK290225|SCAMP1|9522|secretory carrier membrane protein 1##CR542286|SCAMP1|9522|secretory carrier membrane protein 1	0.0	
chr7	93532056	93532175	reg1001264.p1	4.210	+	CU675117 DQ892533 DQ895744 L27624 AY691946 D29992 AK075427 AK024817 AK075425 AK092499 AK129833 AK313260 BC005330 NM_006528 TSC_hg19_v1_chr7_-_93520066	-12086	-	AB022177 AK313996 NM_001164737 NM_001742	-328077	-	AB022178 NM_001164738	-342994	-	BC029367 NM_021955	3704	+	NM_004126 BC009709	18941	+	BT009853 DQ894078 BC000899 TSC_hg19_v1_chr7_-_93633668 CR749267 AF007551 AK313984 BC012595 NM_005868	101499	-	DQ892533|TFPI2|7980|tissue factor pathway inhibitor 2##DQ895744|TFPI2|7980|tissue factor pathway inhibitor 2##L27624|TFPI2|7980|tissue factor pathway inhibitor 2##AY691946|TFPI2|7980|tissue factor pathway inhibitor 2##D29992|TFPI2|7980|tissue factor pathway inhibitor 2##AK075427|TFPI2|7980|tissue factor pathway inhibitor 2##AK024817|TFPI2|7980|tissue factor pathway inhibitor 2##AK075425|TFPI2|7980|tissue factor pathway inhibitor 2##AK092499|TFPI2|7980|tissue factor pathway inhibitor 2##AK129833|TFPI2|7980|tissue factor pathway inhibitor 2##AK313260|TFPI2|7980|tissue factor pathway inhibitor 2##BC005330|TFPI2|7980|tissue factor pathway inhibitor 2##NM_006528|TFPI2|7980|tissue factor pathway inhibitor 2##AB022177|CALCR|799|calcitonin receptor##AK313996|CALCR|799|calcitonin receptor##NM_001164737|CALCR|799|calcitonin receptor##NM_001742|CALCR|799|calcitonin receptor##AB022178|CALCR|799|calcitonin receptor##NM_001164738|CALCR|799|calcitonin receptor##BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)	0.0	
chr8	85966804	85966913	reg1032143.p1	4.210	+	NM_001100391 BC031090	-869754	+	TSC_hg19_v1_chr8_+_85095702 AK095026	-871123	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	-871315	+	AK300234 NM_033402 TSC_hg19_v1_chr8_+_86019350	52489	+	TSC_hg19_v1_chr8_+_86019442 BC030701 BC070092 AK056185 AK300874 AK302648 AK307350 AK307636 AK307443	52611	+	NM_001083588 NM_001951 U31556 TSC_hg19_v1_chr8_+_86089622 Z78409 X86097	122763	+	NM_001100391|RALYL|138046|RALY RNA binding protein-like##BC031090|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK300234|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_033402|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC030701|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC070092|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK056185|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK300874|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK302648|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307350|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307636|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307443|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_001083588|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001951|E2F5|1875|E2F transcription factor 5, p130-binding##U31556|E2F5|1875|E2F transcription factor 5, p130-binding##Z78409|E2F5|1875|E2F transcription factor 5, p130-binding##X86097|E2F5|1875|E2F transcription factor 5, p130-binding	0.435266	CTCF.p2:-15:0.435
chrX	58514782	58514879	reg1032886.p2	4.210	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-577871	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-896370	+	NM_007157	-896562	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	4056369	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	4133437	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	4266037	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.0	
chr10	64529940	64530067	reg1028175.p3	4.209	+	AJ505150 NM_199452	-249797	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-395960	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-501464	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	34539	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	34654	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	46094	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.0	
chr1	202205606	202205749	reg1032103.p1	4.209	+	AF190501 NM_001017404	-22395	+	AY358119 BC038795 NM_021636 BC047905	-32785	+	NM_001017403 AB049405	-42503	+	AK000504 AF160215 BC004152 BC019284 TSC_hg19_v1_chr1_-_202311065	105379	-	TSC_hg19_v1_chr1_-_202311082 AF161499 NM_014176	105409	-	TSC_hg19_v1_chr1_+_202317826 AK307591 NM_001167857 NM_001167858 NM_002481 AB003062 AF324888 BC144699 BC110907 BC034430 BC071166	112196	+	AF190501|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_001017404|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AY358119|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC038795|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_021636|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC047905|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_001017403|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AB049405|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AK000504|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AF160215|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##BC004152|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##BC019284|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AF161499|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##NM_014176|UBE2T|29089|ubiquitin-conjugating enzyme E2T (putative)##AK307591|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167857|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001167858|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_002481|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB003062|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AF324888|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC144699|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC110907|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC034430|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC071166|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B	0.032066	
chr1	205400004	205400143	reg1026525.p1	4.209	+	AB084764 AB084765 AB085610 AB096677 AB096678 AB096679 AB096680 AB096681 AB096682 BC036636 AK302392 NM_001001552 NM_001199050 NM_001199051 NM_001199052	-8877	-	AK299227 AK001610 NM_018203 AK096590	-74033	-	BC036076 TSC_hg19_v1_chr1_-_205313311	-86763	-	NM_002596 NM_212502 NM_212503 TSC_hg19_v1_chr1_+_205473688 AK293756 AK296320 AK295654	73632	+	AY353237 AY353240 TSC_hg19_v1_chr1_+_205473802 AY353238 BC011526 AY353239	73749	+	AK293816 NM_181644 TSC_hg19_v1_chr1_+_205538141	138054	+	AB084764|LEMD1|93273|LEM domain containing 1##AB084765|LEMD1|93273|LEM domain containing 1##AB085610|LEMD1|93273|LEM domain containing 1##AB096677|LEMD1|93273|LEM domain containing 1##AB096678|LEMD1|93273|LEM domain containing 1##AB096679|LEMD1|93273|LEM domain containing 1##AB096680|LEMD1|93273|LEM domain containing 1##AB096681|LEMD1|93273|LEM domain containing 1##AB096682|LEMD1|93273|LEM domain containing 1##BC036636|LEMD1|93273|LEM domain containing 1##AK302392|LEMD1|93273|LEM domain containing 1##NM_001001552|LEMD1|93273|LEM domain containing 1##NM_001199050|LEMD1|93273|LEM domain containing 1##NM_001199051|LEMD1|93273|LEM domain containing 1##NM_001199052|LEMD1|93273|LEM domain containing 1##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A##BC036076|KLHDC8A|55220|kelch domain containing 8A##NM_002596|CDK18|5129|cyclin-dependent kinase 18##NM_212502|CDK18|5129|cyclin-dependent kinase 18##NM_212503|CDK18|5129|cyclin-dependent kinase 18##AK293756|CDK18|5129|cyclin-dependent kinase 18##AK296320|CDK18|5129|cyclin-dependent kinase 18##AK295654|CDK18|5129|cyclin-dependent kinase 18##AY353237|CDK18|5129|cyclin-dependent kinase 18##AY353240|CDK18|5129|cyclin-dependent kinase 18##AY353238|CDK18|5129|cyclin-dependent kinase 18##BC011526|CDK18|5129|cyclin-dependent kinase 18##AY353239|CDK18|5129|cyclin-dependent kinase 18##AK293816|MFSD4|148808|major facilitator superfamily domain containing 4##NM_181644|MFSD4|148808|major facilitator superfamily domain containing 4	0.159163	
chr13	25760500	25760630	reg1031010.p1	4.209	+	AK055049 BC041392 TSC_hg19_v1_chr13_-_25746427	-14200	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	-14748	-	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	-14905	-	AB384771 AF406619 AM392681 AM392837 CU691804 TSC_hg19_v1_chr13_-_25861510	100883	-	AK314587 TSC_hg19_v1_chr13_-_25861584 BC040012	101010	-	TSC_hg19_v1_chr13_-_25861621 AL832017 AK093237 AX748005 NM_004685	101090	-	AK055049|FAM123A|219287|family with sequence similarity 123A##BC041392|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##AF406619|MTMR6|9107|myotubularin related protein 6##AM392681|MTMR6|9107|myotubularin related protein 6##AM392837|MTMR6|9107|myotubularin related protein 6##AK314587|MTMR6|9107|myotubularin related protein 6##BC040012|MTMR6|9107|myotubularin related protein 6##AL832017|MTMR6|9107|myotubularin related protein 6##AK093237|MTMR6|9107|myotubularin related protein 6##NM_004685|MTMR6|9107|myotubularin related protein 6	0.0	
chr15	102314100	102314223	reg1034121.p2	4.209	+	TSC_hg19_v1_chr15_-_102264638 BC132671 BC136315 BC143943 AK056653 AX721055 NM_152334	-49506	-	TSC_hg19_v1_chr15_-_102192580 BC006150 BC008873 AF353992 AK315584 AK297048 AK026257 AK296553 NM_025141 NM_078474	-121695	-	TSC_hg19_v1_chr15_-_102030140 NM_002570 NM_138319 NM_138320 NM_138321 NM_138322 NM_138323 NM_138324 NM_138325	-283999	-	BC137002 BC137003 NM_001005326	31750	+	BC137064 BC137065 NM_001001674	44216	+	AY792621 NM_001195021	68160	+	BC132671|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC136315|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC143943|TARSL2|123283|threonyl-tRNA synthetase-like 2##AK056653|TARSL2|123283|threonyl-tRNA synthetase-like 2##NM_152334|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC006150|TM2D3|80213|TM2 domain containing 3##BC008873|TM2D3|80213|TM2 domain containing 3##AF353992|TM2D3|80213|TM2 domain containing 3##AK315584|TM2D3|80213|TM2 domain containing 3##AK297048|TM2D3|80213|TM2 domain containing 3##AK026257|TM2D3|80213|TM2 domain containing 3##AK296553|TM2D3|80213|TM2 domain containing 3##NM_025141|TM2D3|80213|TM2 domain containing 3##NM_078474|TM2D3|80213|TM2 domain containing 3##NM_002570|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138319|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138320|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138321|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138322|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138323|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138324|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138325|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137064|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##BC137065|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##NM_001001674|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##AY792621|GPCRLTM7|100272148|putative olfactory receptor GPCRLTM7##NM_001195021|GPCRLTM7|100272148|putative olfactory receptor GPCRLTM7	0.835639	CTCF.p2:-8:0.836
chr17	2427583	2427764	reg1032574.p2	4.209	+	TSC_hg19_v1_chr17_-_2415189 BX647255 AK294547 BC050603 BC001213 AL832612 AK027410 AK296464 NM_024086	-12528	-	X96401 NM_020310 TSC_hg19_v1_chr17_-_2304355 AK291596	-123357	-	TSC_hg19_v1_chr17_+_2240796 NM_014853 AB007857 NM_001098509 BC039204 AK294955 AB275762 AB385325 AB449878 AK304263	-186771	+	TSC_hg19_v1_chr17_+_2496944 NM_000430 L13386	69297	+	TSC_hg19_v1_chr17_+_2497263 BX538346 AK313078 L13385 BC064638	69585	+	NM_015229 TSC_hg19_v1_chr17_-_2615039	187314	-	BX647255|METTL16|79066|methyltransferase like 16##AK294547|METTL16|79066|methyltransferase like 16##BC050603|METTL16|79066|methyltransferase like 16##BC001213|METTL16|79066|methyltransferase like 16##AL832612|METTL16|79066|methyltransferase like 16##AK027410|METTL16|79066|methyltransferase like 16##AK296464|METTL16|79066|methyltransferase like 16##NM_024086|METTL16|79066|methyltransferase like 16##X96401|MNT|4335|MAX binding protein##NM_020310|MNT|4335|MAX binding protein##AK291596|MNT|4335|MAX binding protein##NM_014853|SGSM2|9905|small G protein signaling modulator 2##AB007857|SGSM2|9905|small G protein signaling modulator 2##NM_001098509|SGSM2|9905|small G protein signaling modulator 2##BC039204|SGSM2|9905|small G protein signaling modulator 2##AK294955|SGSM2|9905|small G protein signaling modulator 2##AB275762|SGSM2|9905|small G protein signaling modulator 2##AB449878|SGSM2|9905|small G protein signaling modulator 2##AK304263|SGSM2|9905|small G protein signaling modulator 2##NM_000430|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13386|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BX538346|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##AK313078|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13385|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BC064638|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##NM_015229|KIAA0664|23277|KIAA0664	0.100836	
chr21	45565244	45565329	reg1033159.p2	4.209	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-11725	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-11781	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-37987	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	95480	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	95571	-	AF194032 NM_013369 NM_175867	116812	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr2	175901369	175901509	reg1033171.p1	4.209	+	AK289941 BC011393 NM_001822 TSC_hg19_v1_chr2_-_175870101 AB209788 AK300890 NM_001025201	-31426	-	AK055060 NM_001206602	-189129	-	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	-272270	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	131456	-	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	144865	-	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	965536	-	AK289941|CHN1|1123|chimerin (chimaerin) 1##BC011393|CHN1|1123|chimerin (chimaerin) 1##NM_001822|CHN1|1123|chimerin (chimaerin) 1##AB209788|CHN1|1123|chimerin (chimaerin) 1##AK300890|CHN1|1123|chimerin (chimaerin) 1##NM_001025201|CHN1|1123|chimerin (chimaerin) 1##AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1##AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715	0.259092	CTCF.p2:-7:0.259
chr2	219157255	219157399	reg1028855.p1	4.209	+	TSC_hg19_v1_chr2_-_219157237 AF193045 BC007980 AK095270 AK300597 AK298123 BC026348 AK130713 AK298500 BC026693 AK130380 BC013428 NM_022152	-72	-	AF318057 AF417001 NM_001077399 NM_015488 AK289867 TSC_hg19_v1_chr2_+_219135241 BC036457 AY039043 BC021118 AL080092 CU676836 EU831585 EU831670 AB033010	-22134	+	AK131047 TSC_hg19_v1_chr2_-_219134886 NM_001087	-22447	-	TSC_hg19_v1_chr2_+_219187970 NM_022572	30588	+	TSC_hg19_v1_chr2_+_219188021 AY358753 CU678300 AM393075 AM393168 BC002937 AK309308	30710	+	BC052750 NM_198559 CU690932	64264	+	AF193045|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC007980|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK300597|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK298123|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC026348|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK130713|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK298500|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC026693|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK130380|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC013428|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##NM_022152|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AF318057|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AF417001|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##NM_001077399|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##NM_015488|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK289867|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC036457|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AY039043|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC021118|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AL080092|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##EU831585|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##EU831670|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AB033010|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK131047|AAMP|14|angio-associated, migratory cell protein##NM_001087|AAMP|14|angio-associated, migratory cell protein##NM_022572|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AY358753|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AM393075|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AM393168|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC002937|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK309308|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC052750|C2orf62|375307|chromosome 2 open reading frame 62##NM_198559|C2orf62|375307|chromosome 2 open reading frame 62	0.961374	CTCF.p2:0:0.961
chr6	10962887	10963067	reg1034329.p1	4.209	+	AK128130 NM_001040274	-75914	+	AF091149 BC069603 AF079550 BC117316 BC117318 NM_004752	-80898	-	AK314408 AB593146 AK097831 AK310329 TSC_hg19_v1_chr6_-_10838761 BC033002 NM_001242385 NM_001242957 NM_005906	-124228	-	TSC_hg19_v1_chr6_-_11044539 AK000341 BC060809 BC050278 NM_017770	81603	-	TSC_hg19_v1_chr6_+_11094066 AK058186	131080	+	BC032356 NM_001135575 TSC_hg19_v1_chr6_+_11094342	131326	+	AK128130|SYCP2L|221711|synaptonemal complex protein 2-like##NM_001040274|SYCP2L|221711|synaptonemal complex protein 2-like##AF091149|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC069603|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AF079550|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117316|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117318|GCM2|9247|glial cells missing homolog 2 (Drosophila)##NM_004752|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AK314408|MAK|4117|male germ cell-associated kinase##AB593146|MAK|4117|male germ cell-associated kinase##AK097831|MAK|4117|male germ cell-associated kinase##AK310329|MAK|4117|male germ cell-associated kinase##BC033002|MAK|4117|male germ cell-associated kinase##NM_001242385|MAK|4117|male germ cell-associated kinase##NM_001242957|MAK|4117|male germ cell-associated kinase##NM_005906|MAK|4117|male germ cell-associated kinase##AK000341|ELOVL2|54898|ELOVL fatty acid elongase 2##BC060809|ELOVL2|54898|ELOVL fatty acid elongase 2##BC050278|ELOVL2|54898|ELOVL fatty acid elongase 2##NM_017770|ELOVL2|54898|ELOVL fatty acid elongase 2##AK058186|C6orf228|221710|chromosome 6 open reading frame 228##BC032356|C6orf228|221710|chromosome 6 open reading frame 228##NM_001135575|C6orf228|221710|chromosome 6 open reading frame 228	0.0	
chr6	371828	372002	reg1026277.p3	4.209	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-79418	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-79830	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	19849	+	AF508547 BC101697 BC101699 NM_148959	285038	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	321175	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chr9	112669692	112669873	reg1021445.p2	4.209	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	-127167	+	BC039306 NM_001037293 AK095003	-266713	+	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	-409193	-	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	141127	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	141181	+	NM_001136562 AK300427	218010	+	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2	0.0	
chr12	49486018	49486132	reg1029255.p1	4.208	+	BC014155 BC027482 NM_144593 AK098663 AY509932 AY327412	-22307	-	AF010403 NM_003482	-36969	-	TSC_hg19_v1_chr12_-_49412538 AK293332 NM_001206710 AK303276 AK307994 AK310250 BC000358 AK097606 NM_001206709 NM_002733	-73504	-	AK313360 BC033507 HQ607677 HQ607678 NM_021044	2510	-	CU677167 CU678919 CU689172 DQ892407 DQ895619 TSC_hg19_v1_chr12_-_49504467 BC015015 BC031550 AB033000 AK001356	18350	-	BC008337 TSC_hg19_v1_chr12_-_49504631 AK001651 AK298026	18548	-	BC014155|RHEBL1|121268|Ras homolog enriched in brain like 1##BC027482|RHEBL1|121268|Ras homolog enriched in brain like 1##NM_144593|RHEBL1|121268|Ras homolog enriched in brain like 1##AK098663|RHEBL1|121268|Ras homolog enriched in brain like 1##AY509932|RHEBL1|121268|Ras homolog enriched in brain like 1##AY327412|RHEBL1|121268|Ras homolog enriched in brain like 1##AF010403|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##NM_003482|MLL2|8085|myeloid/lymphoid or mixed-lineage leukemia 2##AK293332|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206710|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK303276|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK307994|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK310250|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##BC000358|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK097606|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_001206709|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##NM_002733|PRKAG1|5571|protein kinase, AMP-activated, gamma 1 non-catalytic subunit##AK313360|DHH|50846|desert hedgehog##BC033507|DHH|50846|desert hedgehog##HQ607677|DHH|50846|desert hedgehog##HQ607678|DHH|50846|desert hedgehog##NM_021044|DHH|50846|desert hedgehog##DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like##DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like##AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC008337|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK001651|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK298026|LMBR1L|55716|limb region 1 homolog (mouse)-like	0.335634	CTCF.p2:45:0.336
chr1	31975029	31975150	reg1029351.p2	4.208	+	AK093784 AK316357 AX748305 NM_001199039 NM_018565 AK296118	-88402	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	-89023	+	NM_001199037 AK298512	-92056	+	NM_001204414 NM_022164 TSC_hg19_v1_chr1_+_32042115 AK292770 AK075398 AK296322 AK298382	67014	+	TSC_hg19_v1_chr1_+_32042122 AY358421	67033	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	67053	+	AK093784|SERINC2|347735|serine incorporator 2##AK316357|SERINC2|347735|serine incorporator 2##NM_001199039|SERINC2|347735|serine incorporator 2##NM_018565|SERINC2|347735|serine incorporator 2##AK296118|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##NM_001204414|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_022164|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK292770|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK075398|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK296322|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298382|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AY358421|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1	0.0	
chr16	17228555	17228703	reg1029349.p1	4.208	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-902099	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-902141	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-902147	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	336176	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1344762	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1569467	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr16	25026795	25026928	reg1024062.p1	4.208	+	TSC_hg19_v1_chr16_-_25026691 AK027567 AK291691 BC080195 AK301500 NM_001006634 NM_018054	-169	-	AJ306731 AJ306732 TSC_hg19_v1_chr16_-_25026604	-249	-	AK125358 TSC_hg19_v1_chr16_-_24968918	-57969	-	TSC_hg19_v1_chr16_+_25078227 BC023651 AK093382	51428	+	TSC_hg19_v1_chr16_+_25123062 NM_001032391 NM_016309 AK223364 AF151826 BC001214	96200	+	TSC_hg19_v1_chr16_+_25123102 AK025884 AK225271 AK291885 AK314409 BC014217 AF037601 CU674610 AL137283 CU676933	96336	+	AK027567|ARHGAP17|55114|Rho GTPase activating protein 17##AK291691|ARHGAP17|55114|Rho GTPase activating protein 17##BC080195|ARHGAP17|55114|Rho GTPase activating protein 17##AK301500|ARHGAP17|55114|Rho GTPase activating protein 17##NM_001006634|ARHGAP17|55114|Rho GTPase activating protein 17##NM_018054|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306731|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306732|ARHGAP17|55114|Rho GTPase activating protein 17##AK125358|ARHGAP17|55114|Rho GTPase activating protein 17##BC023651|LOC283887|283887|uncharacterized LOC283887##AK093382|LOC283887|283887|uncharacterized LOC283887##NM_001032391|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_016309|LCMT1|51451|leucine carboxyl methyltransferase 1##AK223364|LCMT1|51451|leucine carboxyl methyltransferase 1##AF151826|LCMT1|51451|leucine carboxyl methyltransferase 1##BC001214|LCMT1|51451|leucine carboxyl methyltransferase 1##AK025884|LCMT1|51451|leucine carboxyl methyltransferase 1##AK225271|LCMT1|51451|leucine carboxyl methyltransferase 1##AK291885|LCMT1|51451|leucine carboxyl methyltransferase 1##AK314409|LCMT1|51451|leucine carboxyl methyltransferase 1##BC014217|LCMT1|51451|leucine carboxyl methyltransferase 1##AF037601|LCMT1|51451|leucine carboxyl methyltransferase 1##AL137283|LCMT1|51451|leucine carboxyl methyltransferase 1	0.0	
chr19	55128709	55128805	reg1027098.p2	4.208	+	AK311555 BC015731 NM_006669 AK292028	-120	+	BC047007 AK290919 AK311226 AF025530 NM_006863 BC032238 BC063009 AF025529	-23672	+	TSC_hg19_v1_chr19_+_55085279 U70665 BC017412 AK222651 AF025531 U82276 BC027916 EU915609 EU915610 CU675976 AF041034 U82277 U82278	-43448	+	NM_001081638 NM_001081639 TSC_hg19_v1_chr19_+_55141934 AK223310 AF283984 AF004230 NM_001081637 AF283985	13210	+	NM_001081438 NM_006847	45366	+	TSC_hg19_v1_chr19_+_55174417 AK292082 AK309227 AK314783	45656	+	BC015731|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_006669|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AK292028|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##BC047007|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AK290919|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AK311226|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AF025530|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##NM_006863|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##BC032238|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##BC063009|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AF025529|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##U70665|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC017412|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AK222651|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AF025531|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82276|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC027916|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##EU915609|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##EU915610|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82277|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82278|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_001081638|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081639|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AK223310|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AF283984|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081637|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AF283985|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081438|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##NM_006847|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK292082|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK309227|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##AK314783|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4	0.0	
chr7	126496864	126496986	reg1031158.p2	4.208	+	NM_001042594 NM_015450	-1926889	-	BC130600 BC130604 NM_001024603	-2066123	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	-2091129	-	NM_000845	386643	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	395440	-	TSC_hg19_v1_chr7_-_126893165 AK290197	396227	-	NM_001042594|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_015450|POT1|25913|protection of telomeres 1 homolog (S. pombe)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##AK290197|GRM8|2918|glutamate receptor, metabotropic 8	0.906915	CTCF.p2:-2:0.907
chr11	118766397	118766578	reg1031817.p2	4.207	+	NM_032966 X68829	-2387	+	AK291512 NM_001716 BC110352 X68149 AB464488	-11927	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-104553	-	AB094091 NM_182557	15125	-	NM_006760 Y13645 BC113900 AY455312 AB009454	60576	+	AB094092 NM_181721 BC028191 BC125040 BC038969	75991	+	NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_006760|UPK2|7379|uroplakin 2##Y13645|UPK2|7379|uroplakin 2##BC113900|UPK2|7379|uroplakin 2##AY455312|UPK2|7379|uroplakin 2##AB009454|UPK2|7379|uroplakin 2##AB094092|FOXR1|283150|forkhead box R1##NM_181721|FOXR1|283150|forkhead box R1##BC028191|FOXR1|283150|forkhead box R1##BC125040|FOXR1|283150|forkhead box R1##BC038969|FOXR1|283150|forkhead box R1	0.0	
chr11	47270643	47270788	reg1025699.p2	4.207	+	TSC_hg19_v1_chr11_+_47270457 NM_001130102 BC041172	-250	+	DQ892669 DQ895913 BC003160 TSC_hg19_v1_chr11_-_47270357 X12548 AK298122 AK097626 AK300569 AK300931 AK301860 AK308512 BC093010 AK299382 AK300911 AK303894 AK311431 NM_001131064 NM_001610	-318	-	AK298439 TSC_hg19_v1_chr11_-_47270266	-493	-	NM_001130101 NM_005693 TSC_hg19_v1_chr11_+_47279546 AK290614 AK313311 AK309027 AK122661 BC008819	8797	+	TSC_hg19_v1_chr11_+_47290926 NM_130470 U77352	20225	+	TSC_hg19_v1_chr11_+_47291234 NM_001135944 NM_003682 NM_130471 NM_130472 NM_130473 NM_130474 AF440100 AF440101 AF440102 AF440103 AF440434 AK292442	20498	+	NM_001130102|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##BC041172|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##DQ892669|ACP2|53|acid phosphatase 2, lysosomal##DQ895913|ACP2|53|acid phosphatase 2, lysosomal##BC003160|ACP2|53|acid phosphatase 2, lysosomal##X12548|ACP2|53|acid phosphatase 2, lysosomal##AK298122|ACP2|53|acid phosphatase 2, lysosomal##AK300569|ACP2|53|acid phosphatase 2, lysosomal##AK300931|ACP2|53|acid phosphatase 2, lysosomal##AK301860|ACP2|53|acid phosphatase 2, lysosomal##AK308512|ACP2|53|acid phosphatase 2, lysosomal##BC093010|ACP2|53|acid phosphatase 2, lysosomal##AK299382|ACP2|53|acid phosphatase 2, lysosomal##AK300911|ACP2|53|acid phosphatase 2, lysosomal##AK303894|ACP2|53|acid phosphatase 2, lysosomal##AK311431|ACP2|53|acid phosphatase 2, lysosomal##NM_001131064|ACP2|53|acid phosphatase 2, lysosomal##NM_001610|ACP2|53|acid phosphatase 2, lysosomal##AK298439|ACP2|53|acid phosphatase 2, lysosomal##NM_001130101|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##NM_005693|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK290614|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK313311|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK309027|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK122661|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##BC008819|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##NM_130470|MADD|8567|MAP-kinase activating death domain##U77352|MADD|8567|MAP-kinase activating death domain##NM_001135944|MADD|8567|MAP-kinase activating death domain##NM_003682|MADD|8567|MAP-kinase activating death domain##NM_130471|MADD|8567|MAP-kinase activating death domain##NM_130472|MADD|8567|MAP-kinase activating death domain##NM_130473|MADD|8567|MAP-kinase activating death domain##NM_130474|MADD|8567|MAP-kinase activating death domain##AF440100|MADD|8567|MAP-kinase activating death domain##AF440101|MADD|8567|MAP-kinase activating death domain##AF440102|MADD|8567|MAP-kinase activating death domain##AF440103|MADD|8567|MAP-kinase activating death domain##AF440434|MADD|8567|MAP-kinase activating death domain##AK292442|MADD|8567|MAP-kinase activating death domain	0.0	
chr17	45356452	45356574	reg1022582.p1	4.207	+	TSC_hg19_v1_chr17_+_45331260 AK300424	-25255	+	AY826979 TSC_hg19_v1_chr17_+_45331224 AB587392 U95204	-25289	+	TSC_hg19_v1_chr17_+_45331192 BC127666 BC127667 J02703 NM_000212 M35999 M20311	-25329	+	BC044604 TSC_hg19_v1_chr17_+_45401141	44628	+	TSC_hg19_v1_chr17_+_45401357 NM_001195192 NM_152347 BC036407 BC037876	44819	+	TSC_hg19_v1_chr17_-_45569837 BC090855 BC067758	213331	-	AY826979|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##U95204|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127666|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127667|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##J02703|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##NM_000212|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M35999|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M20311|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC044604|C17orf57|124989|chromosome 17 open reading frame 57##NM_001195192|C17orf57|124989|chromosome 17 open reading frame 57##NM_152347|C17orf57|124989|chromosome 17 open reading frame 57##BC036407|C17orf57|124989|chromosome 17 open reading frame 57##BC037876|C17orf57|124989|chromosome 17 open reading frame 57##BC090855|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2##BC067758|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2	0.583714	CTCF.p2:16:0.584
chr1	76048720	76048814	reg1033264.p1	4.207	+	NM_001001933 BC040321	-454648	+	NM_001130042 NM_001130043 NM_001134759 NM_001889	-849676	-	NM_001162916 AK098237 BC071765 NM_138467 AK294264 AK299849 BC009514 AK311272 AB590606	-849887	+	AK128063 BC028743 BC034580 BC051740 NM_001130058 NM_152697 AK093170 AX747970	28014	-	AK299573 TSC_hg19_v1_chr1_-_76081791	32979	-	NM_000016 NM_001127328 TSC_hg19_v1_chr1_+_76190106	141307	+	NM_001001933|LHX8|431707|LIM homeobox 8##BC040321|LHX8|431707|LIM homeobox 8##NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001162916|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK098237|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC071765|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##NM_138467|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK294264|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK299849|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC009514|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK311272|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK128063|SLC44A5|204962|solute carrier family 44, member 5##BC028743|SLC44A5|204962|solute carrier family 44, member 5##BC034580|SLC44A5|204962|solute carrier family 44, member 5##BC051740|SLC44A5|204962|solute carrier family 44, member 5##NM_001130058|SLC44A5|204962|solute carrier family 44, member 5##NM_152697|SLC44A5|204962|solute carrier family 44, member 5##AK093170|SLC44A5|204962|solute carrier family 44, member 5##AK299573|SLC44A5|204962|solute carrier family 44, member 5##NM_000016|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##NM_001127328|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain	0.0	
chr21	34814557	34814727	reg1027519.p2	4.207	+	TSC_hg19_v1_chr21_-_34787167 DQ655977	-27434	-	TSC_hg19_v1_chr21_+_34775780 AB463788 DQ892320 DQ895522	-38829	+	AK314005 TSC_hg19_v1_chr21_+_34775746 AK292246	-38894	+	TSC_hg19_v1_chr21_-_34852209 AK310701	37545	-	TSC_hg19_v1_chr21_-_34852239 AY358634 BC000569 AK309977 BX537378 AF045606	37607	-	TSC_hg19_v1_chr21_-_34852282 NM_006134 DQ656043	37657	-	DQ892320|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##DQ895522|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK314005|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK292246|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK310701|TMEM50B|757|transmembrane protein 50B##AY358634|TMEM50B|757|transmembrane protein 50B##BC000569|TMEM50B|757|transmembrane protein 50B##AK309977|TMEM50B|757|transmembrane protein 50B##AF045606|TMEM50B|757|transmembrane protein 50B##NM_006134|TMEM50B|757|transmembrane protein 50B##DQ656043|TMEM50B|757|transmembrane protein 50B	0.0	
chr2	201535180	201535286	reg1036048.p2	4.207	+	AK297930 AK307738 TSC_hg19_v1_chr2_+_201474048	-61236	+	AB046692 NM_001159 TSC_hg19_v1_chr2_+_201450748 BC117179 BC117181	-84449	+	TSC_hg19_v1_chr2_+_201450590 AK301052	-84646	+	TSC_hg19_v1_chr2_+_201676291 NM_001207067 NM_014670 AL833518	141053	+	TSC_hg19_v1_chr2_+_201676632 Z70221 AK096489	141381	+	D13630 TSC_hg19_v1_chr2_+_201676645 BC001804	141413	+	AK297930|AOX1|316|aldehyde oxidase 1##AK307738|AOX1|316|aldehyde oxidase 1##AB046692|AOX1|316|aldehyde oxidase 1##NM_001159|AOX1|316|aldehyde oxidase 1##BC117179|AOX1|316|aldehyde oxidase 1##BC117181|AOX1|316|aldehyde oxidase 1##AK301052|AOX1|316|aldehyde oxidase 1##NM_001207067|BZW1|9689|basic leucine zipper and W2 domains 1##NM_014670|BZW1|9689|basic leucine zipper and W2 domains 1##AL833518|BZW1|9689|basic leucine zipper and W2 domains 1##Z70221|BZW1|9689|basic leucine zipper and W2 domains 1##AK096489|BZW1|9689|basic leucine zipper and W2 domains 1##D13630|BZW1|9689|basic leucine zipper and W2 domains 1##BC001804|BZW1|9689|basic leucine zipper and W2 domains 1	0.9812	CTCF.p2:25:0.981
chr2	230775605	230775770	reg1034844.p2	4.207	+	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	-196439	-	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	-639682	-	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-1729325	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	10974	-	TSC_hg19_v1_chr2_-_230786712 AK310971	11062	-	TSC_hg19_v1_chr2_+_230787218 BC017869 BC022538 NM_174899 BC033935 AK289655 AK309702	11530	+	AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12##BC017869|FBXO36|130888|F-box protein 36##BC022538|FBXO36|130888|F-box protein 36##NM_174899|FBXO36|130888|F-box protein 36##BC033935|FBXO36|130888|F-box protein 36##AK289655|FBXO36|130888|F-box protein 36##AK309702|FBXO36|130888|F-box protein 36	0.976158	CTCF.p2:-19:0.976
chr4	73993708	73993801	reg1029726.p1	4.207	+	BC101684 BC143642 TSC_hg19_v1_chr4_-_73935431 AK096310 AY957564 AY957565 BC071812 NM_173827	-58311	-	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	-559263	-	AK290937 NM_001144756 NM_053036 AF236083	-1088884	+	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	95025	-	TSC_hg19_v1_chr4_-_74124365 AB527094	130605	-	TSC_hg19_v1_chr4_-_74124513 BC043394 BC004173 AF308285 NM_032217 NM_198889 AK307581	130731	-	BC101684|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC143642|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK096310|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957564|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957565|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC071812|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_173827|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AK290937|NPFFR2|10886|neuropeptide FF receptor 2##NM_001144756|NPFFR2|10886|neuropeptide FF receptor 2##NM_053036|NPFFR2|10886|neuropeptide FF receptor 2##AF236083|NPFFR2|10886|neuropeptide FF receptor 2##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17##BC043394|ANKRD17|26057|ankyrin repeat domain 17##BC004173|ANKRD17|26057|ankyrin repeat domain 17##AF308285|ANKRD17|26057|ankyrin repeat domain 17##NM_032217|ANKRD17|26057|ankyrin repeat domain 17##NM_198889|ANKRD17|26057|ankyrin repeat domain 17##AK307581|ANKRD17|26057|ankyrin repeat domain 17	0.041303	
chr1	178575331	178575406	reg1030536.p2	4.206	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-93102	+	AF047711 NM_004841 AK290308	-264734	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-511727	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	119005	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	264778	-	TSC_hg19_v1_chr1_+_178995028 AB007944	419652	+	AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##BC110611|RASAL2|9462|RAS protein activator like 2##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##AB007944|FAM20B|9917|family with sequence similarity 20, member B	0.0	
chr1	67807878	67808052	reg1026045.p1	4.206	+	AK294494 TSC_hg19_v1_chr1_+_67773565 AK316525	-34402	+	NM_001559 U64198 TSC_hg19_v1_chr1_+_67773087	-34884	+	AF461422 NM_144701	-175797	+	CR457383 AB527591 CU675982 CU676556 CU677990 CU693242 EU831446 EU831638 EU831722 EU832650 EU832728 TSC_hg19_v1_chr1_-_67896065 BC003049 AK130606 BC002488 BC008045 BC017449 BC020555 BC026916 BC019273 AL080119 AF151813	88058	-	TSC_hg19_v1_chr1_-_67896070 AK074970 AK222955 AK223138	88107	-	TSC_hg19_v1_chr1_-_67896086 AK312256	88120	-	AK294494|IL12RB2|3595|interleukin 12 receptor, beta 2##AK316525|IL12RB2|3595|interleukin 12 receptor, beta 2##NM_001559|IL12RB2|3595|interleukin 12 receptor, beta 2##U64198|IL12RB2|3595|interleukin 12 receptor, beta 2##AF461422|IL23R|149233|interleukin 23 receptor##NM_144701|IL23R|149233|interleukin 23 receptor##CR457383|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831446|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831638|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831722|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832650|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832728|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC003049|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK130606|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC002488|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC008045|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC017449|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC020555|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC026916|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC019273|SERBP1|26135|SERPINE1 mRNA binding protein 1##AL080119|SERBP1|26135|SERPINE1 mRNA binding protein 1##AF151813|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK074970|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK222955|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK223138|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK312256|SERBP1|26135|SERPINE1 mRNA binding protein 1	0.0	
chr19	18284682	18284773	reg1032126.p1	4.206	+	TSC_hg19_v1_chr19_+_18284633 AB590284 CU676848 CU689078 DQ884410 DQ892016 DQ895206	-86	+	TSC_hg19_v1_chr19_+_18284622 BC021136 BC031020 AF097362	-106	+	NM_006332 TSC_hg19_v1_chr19_+_18284600 AB049659 AK291551	-136	+	TSC_hg19_v1_chr19_+_18304077 NM_032683 BC093008 BC005064 BC028146 AF320622 AF416712 AK094091	19308	+	M28210 TSC_hg19_v1_chr19_-_18314858 AF254795 BC011782 AK293467 AK289559 NM_002866	30077	-	NM_001098819 U88712	50575	-	DQ884410|IFI30|10437|interferon, gamma-inducible protein 30##DQ892016|IFI30|10437|interferon, gamma-inducible protein 30##DQ895206|IFI30|10437|interferon, gamma-inducible protein 30##BC021136|IFI30|10437|interferon, gamma-inducible protein 30##BC031020|IFI30|10437|interferon, gamma-inducible protein 30##NM_006332|IFI30|10437|interferon, gamma-inducible protein 30##AB049659|IFI30|10437|interferon, gamma-inducible protein 30##AK291551|IFI30|10437|interferon, gamma-inducible protein 30##NM_032683|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC093008|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC005064|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##BC028146|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AF320622|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AF416712|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##AK094091|MPV17L2|84769|MPV17 mitochondrial membrane protein-like 2##M28210|RAB3A|5864|RAB3A, member RAS oncogene family##AF254795|RAB3A|5864|RAB3A, member RAS oncogene family##BC011782|RAB3A|5864|RAB3A, member RAS oncogene family##AK293467|RAB3A|5864|RAB3A, member RAS oncogene family##AK289559|RAB3A|5864|RAB3A, member RAS oncogene family##NM_002866|RAB3A|5864|RAB3A, member RAS oncogene family##NM_001098819|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U88712|PDE4C|5143|phosphodiesterase 4C, cAMP-specific	0.0	
chr2	43148405	43148493	reg1027529.p2	4.206	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-128698	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-157149	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-352552	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	304896	-	TSC_hg19_v1_chr2_-_43453736 BC020369	305281	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	305293	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.812975	CTCF.p2:5:0.813
chr2	61652478	61652586	reg1034148.p1	4.206	+	TSC_hg19_v1_chr2_+_61404793 AL833813	-247743	+	TSC_hg19_v1_chr2_+_61404649 BC063789	-247890	+	TSC_hg19_v1_chr2_+_61404606 BC030998 NM_152392 BC050395	-247949	+	TSC_hg19_v1_chr2_-_61697846 NM_014709	45325	-	TSC_hg19_v1_chr2_-_61697899 AB011142 BC141839	45411	-	TSC_hg19_v1_chr2_-_61764664 Y08614 AK312426	112226	-	AL833813|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##BC063789|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##BC030998|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##NM_152392|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##BC050395|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##NM_014709|USP34|9736|ubiquitin specific peptidase 34##AB011142|USP34|9736|ubiquitin specific peptidase 34##BC141839|USP34|9736|ubiquitin specific peptidase 34##Y08614|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##AK312426|XPO1|7514|exportin 1 (CRM1 homolog, yeast)	0.0	
chr5	86371136	86371304	reg1032368.p2	4.206	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	-457403	+	TSC_hg19_v1_chr5_+_85913757 AK026505	-457462	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-2690556	-	TSC_hg19_v1_chr5_+_86563706 CR749722	192465	+	TSC_hg19_v1_chr5_+_86563831 BC131816	192606	+	TSC_hg19_v1_chr5_+_86564085 AB209106 NM_002890 BC033015	192846	+	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.0	
chr6	150255620	150255801	reg1001297.p2	4.206	+	AY172580 BC096719 BC098152 AY172579 NM_001001788 AK310157	-11510	-	AY359075 NM_001243328	-38516	-	AY054974 AY176317 AY252119 EF489426 AF359243 BC101976 BC103694 AY069961 NM_001243325 NM_001243327 NM_139165	-43608	-	AK299895 AB052906 NM_025217 TSC_hg19_v1_chr6_+_150263162 AX772820 BC034689 AY358665 AF304378 AY026825 CU689938	7454	+	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	29452	+	BC131600 AB528849 AY039682 NM_130900	90923	-	AY172580|RAET1G|353091|retinoic acid early transcript 1G##BC096719|RAET1G|353091|retinoic acid early transcript 1G##BC098152|RAET1G|353091|retinoic acid early transcript 1G##AY172579|RAET1G|353091|retinoic acid early transcript 1G##NM_001001788|RAET1G|353091|retinoic acid early transcript 1G##AK310157|RAET1G|353091|retinoic acid early transcript 1G##AY359075|RAET1E|135250|retinoic acid early transcript 1E##NM_001243328|RAET1E|135250|retinoic acid early transcript 1E##AY054974|RAET1E|135250|retinoic acid early transcript 1E##AY176317|RAET1E|135250|retinoic acid early transcript 1E##AY252119|RAET1E|135250|retinoic acid early transcript 1E##EF489426|RAET1E|135250|retinoic acid early transcript 1E##AF359243|RAET1E|135250|retinoic acid early transcript 1E##BC101976|RAET1E|135250|retinoic acid early transcript 1E##BC103694|RAET1E|135250|retinoic acid early transcript 1E##AY069961|RAET1E|135250|retinoic acid early transcript 1E##NM_001243325|RAET1E|135250|retinoic acid early transcript 1E##NM_001243327|RAET1E|135250|retinoic acid early transcript 1E##NM_139165|RAET1E|135250|retinoic acid early transcript 1E##AK299895|ULBP2|80328|UL16 binding protein 2##AB052906|ULBP2|80328|UL16 binding protein 2##NM_025217|ULBP2|80328|UL16 binding protein 2##AX772820|ULBP2|80328|UL16 binding protein 2##BC034689|ULBP2|80328|UL16 binding protein 2##AY358665|ULBP2|80328|UL16 binding protein 2##AF304378|ULBP2|80328|UL16 binding protein 2##AY026825|ULBP2|80328|UL16 binding protein 2##AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L	0.835669	CTCF.p2:-2:0.836
chr1	231473402	231473581	reg1029608.p1	4.205	+	TSC_hg19_v1_chr1_+_231376968 AJ002190 AB209882 AF043937 BC000450 AK311386	-96464	+	AK223304 TSC_hg19_v1_chr1_+_231376959 AK309994 AK222773	-96529	+	TSC_hg19_v1_chr1_+_231376955 AK314181 AK297982	-96537	+	CU690194 AB587600 BC035763 TSC_hg19_v1_chr1_-_231473577 NM_175876 AK096460	63	-	NM_001010984 NM_032018 BC068478 TSC_hg19_v1_chr1_+_231473753	227	+	TSC_hg19_v1_chr1_+_231473794 BC015740	296	+	AJ002190|GNPAT|8443|glyceronephosphate O-acyltransferase##AB209882|GNPAT|8443|glyceronephosphate O-acyltransferase##AF043937|GNPAT|8443|glyceronephosphate O-acyltransferase##BC000450|GNPAT|8443|glyceronephosphate O-acyltransferase##AK311386|GNPAT|8443|glyceronephosphate O-acyltransferase##AK223304|GNPAT|8443|glyceronephosphate O-acyltransferase##AK309994|GNPAT|8443|glyceronephosphate O-acyltransferase##AK222773|GNPAT|8443|glyceronephosphate O-acyltransferase##AK314181|GNPAT|8443|glyceronephosphate O-acyltransferase##AK297982|GNPAT|8443|glyceronephosphate O-acyltransferase##BC035763|EXOC8|149371|exocyst complex component 8##NM_175876|EXOC8|149371|exocyst complex component 8##AK096460|EXOC8|149371|exocyst complex component 8##NM_001010984|C1orf124|83932|chromosome 1 open reading frame 124##NM_032018|C1orf124|83932|chromosome 1 open reading frame 124##BC068478|C1orf124|83932|chromosome 1 open reading frame 124##BC015740|C1orf124|83932|chromosome 1 open reading frame 124	0.0	
chr13	46311734	46311827	reg1035203.p1	4.205	+	AK093129 AX747942 NM_152719	-35335	+	BC131494 AK057244 NM_182542	-121915	-	TSC_hg19_v1_chr13_+_46039081 NM_031431 AF349676 AF332595 AK026305 AK225466 AK225952 BX648211 AK294959 AK304248 AK314387 BC038953 CU691622	-272683	+	AK096522 AB463764 BC041372 NM_198849	114020	-	BC019000 TSC_hg19_v1_chr13_-_46626864 AK056422 AY283618 NM_015070	315103	-	TSC_hg19_v1_chr13_+_46626953 AK095119 AK124928	315191	+	AK093129|SPERT|220082|spermatid associated##NM_152719|SPERT|220082|spermatid associated##BC131494|FAM194B|220081|family with sequence similarity 194, member B##AK057244|FAM194B|220081|family with sequence similarity 194, member B##NM_182542|FAM194B|220081|family with sequence similarity 194, member B##NM_031431|COG3|83548|component of oligomeric golgi complex 3##AF349676|COG3|83548|component of oligomeric golgi complex 3##AF332595|COG3|83548|component of oligomeric golgi complex 3##AK026305|COG3|83548|component of oligomeric golgi complex 3##AK225466|COG3|83548|component of oligomeric golgi complex 3##AK225952|COG3|83548|component of oligomeric golgi complex 3##BX648211|COG3|83548|component of oligomeric golgi complex 3##AK294959|COG3|83548|component of oligomeric golgi complex 3##AK304248|COG3|83548|component of oligomeric golgi complex 3##AK314387|COG3|83548|component of oligomeric golgi complex 3##BC038953|COG3|83548|component of oligomeric golgi complex 3##BC041372|SIAH3|283514|seven in absentia homolog 3 (Drosophila)##NM_198849|SIAH3|283514|seven in absentia homolog 3 (Drosophila)##BC019000|ZC3H13|23091|zinc finger CCCH-type containing 13##AK056422|ZC3H13|23091|zinc finger CCCH-type containing 13##AY283618|ZC3H13|23091|zinc finger CCCH-type containing 13##NM_015070|ZC3H13|23091|zinc finger CCCH-type containing 13##AK095119|LOC100509894|100509894|uncharacterized LOC100509894##AK124928|LOC100509894|100509894|uncharacterized LOC100509894	0.0	
chr16	89045159	89045337	reg1031117.p2	4.205	+	AB527670 EU446890 BC047019 AK314766 AB010419 BC062624 NM_005187 TSC_hg19_v1_chr16_-_89043569	-1845	-	AB010420 NM_175931	-37642	-	AB528852 EU190484 BC130001 BC130002 NM_001080487	-112207	-	TSC_hg19_v1_chr16_-_89119364 AK055272	74121	-	NM_001127214 NM_001243279 NM_174917 TSC_hg19_v1_chr16_+_89160259	114989	+	TSC_hg19_v1_chr16_+_89160285 BC028399 AK290963 BC064609 BC072391 AK075499	115059	+	EU446890|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC047019|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AK314766|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010419|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC062624|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_005187|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##EU190484|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130001|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130002|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001080487|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001127214|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001243279|ACSF3|197322|acyl-CoA synthetase family member 3##NM_174917|ACSF3|197322|acyl-CoA synthetase family member 3##BC028399|ACSF3|197322|acyl-CoA synthetase family member 3##AK290963|ACSF3|197322|acyl-CoA synthetase family member 3##BC064609|ACSF3|197322|acyl-CoA synthetase family member 3##BC072391|ACSF3|197322|acyl-CoA synthetase family member 3##AK075499|ACSF3|197322|acyl-CoA synthetase family member 3	0.0	
chr7	150102364	150102544	reg1036888.p2	4.205	+	BC143767 TSC_hg19_v1_chr7_+_150102384	-59	+	NM_173680 BC038111	-26027	+	AK226081 AJ245553 NM_014374 BC000363 BC001760 AB529137 CU674178 CU674872 EU446796	-34163	+	BC052099 TSC_hg19_v1_chr7_+_150130817 AK097158 BC109387	28364	+	TSC_hg19_v1_chr7_+_150147882 AK314426	45430	+	TSC_hg19_v1_chr7_+_150147936 NM_175571	45494	+	NM_173680|ZNF775|285971|zinc finger protein 775##BC038111|ZNF775|285971|zinc finger protein 775##AK226081|REPIN1|29803|replication initiator 1##AJ245553|REPIN1|29803|replication initiator 1##NM_014374|REPIN1|29803|replication initiator 1##BC000363|REPIN1|29803|replication initiator 1##BC001760|REPIN1|29803|replication initiator 1##EU446796|REPIN1|29803|replication initiator 1##BC052099|LOC285972|285972|uncharacterized LOC285972##AK097158|LOC285972|285972|uncharacterized LOC285972##BC109387|LOC285972|285972|uncharacterized LOC285972##AK314426|GIMAP8|155038|GTPase, IMAP family member 8##NM_175571|GIMAP8|155038|GTPase, IMAP family member 8	0.0	
chr9	132311447	132311600	reg1036240.p1	4.205	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	-60082	+	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	-60169	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-228228	+	BC112353 AK093122 AX747938 NM_199350	71514	-	TSC_hg19_v1_chr9_+_132388441 NM_014064 AK290957 AK292332 AK298840 AK307056 AK313829	76902	+	TSC_hg19_v1_chr9_+_132388461 BC001396 BC033234 AF110776	76947	+	BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50##NM_014064|METTL11A|28989|methyltransferase like 11A##AK290957|METTL11A|28989|methyltransferase like 11A##AK292332|METTL11A|28989|methyltransferase like 11A##AK298840|METTL11A|28989|methyltransferase like 11A##AK307056|METTL11A|28989|methyltransferase like 11A##AK313829|METTL11A|28989|methyltransferase like 11A##BC001396|METTL11A|28989|methyltransferase like 11A##BC033234|METTL11A|28989|methyltransferase like 11A##AF110776|METTL11A|28989|methyltransferase like 11A	0.024998	
chr11	61659510	61659647	reg1031960.p2	4.204	+	AB529172 DQ892880 DQ896129 CU678796 TSC_hg19_v1_chr11_-_61659018 AF134404 AK295473 AK310523 AF084560 BC004901 NM_021727	-624	-	AK074939 BC009011 TSC_hg19_v1_chr11_+_61595772 AF126799 AB529115	-63762	+	TSC_hg19_v1_chr11_+_61595676 AF084559 NM_004265	-63877	+	TSC_hg19_v1_chr11_-_61684983 BC022239 NM_013401	25410	-	BC015220 NM_001139443 NM_004183	57777	+	CU677245 AK293701 TSC_hg19_v1_chr11_+_61722706 AK301392	63084	+	DQ892880|FADS3|3995|fatty acid desaturase 3##DQ896129|FADS3|3995|fatty acid desaturase 3##AF134404|FADS3|3995|fatty acid desaturase 3##AK295473|FADS3|3995|fatty acid desaturase 3##AK310523|FADS3|3995|fatty acid desaturase 3##AF084560|FADS3|3995|fatty acid desaturase 3##BC004901|FADS3|3995|fatty acid desaturase 3##NM_021727|FADS3|3995|fatty acid desaturase 3##AK074939|FADS2|9415|fatty acid desaturase 2##BC009011|FADS2|9415|fatty acid desaturase 2##AF126799|FADS2|9415|fatty acid desaturase 2##AF084559|FADS2|9415|fatty acid desaturase 2##NM_004265|FADS2|9415|fatty acid desaturase 2##BC022239|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##NM_013401|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##BC015220|BEST1|7439|bestrophin 1##NM_001139443|BEST1|7439|bestrophin 1##NM_004183|BEST1|7439|bestrophin 1##AK293701|BEST1|7439|bestrophin 1##AK301392|BEST1|7439|bestrophin 1	0.853092	CTCF.p2:-21:0.853
chr15	67358044	67358155	reg1030005.p3	4.204	+	NM_001142861 U59914	-357170	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	-362540	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	-363425	+	TSC_hg19_v1_chr15_+_67358179 AK290881	76	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	302	+	NM_001145102 AK316017	60024	+	NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##AK290881|SMAD3|4088|SMAD family member 3##NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3	0.0	
chr17	75455103	75455174	reg1029455.p1	4.204	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-7749	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-8356	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	-8493	+	AK056495 NM_001113495	16186	+	TSC_hg19_v1_chr17_+_75543021 AK096234	87882	+	BC039479 NM_001142640 NM_018996	545144	+	AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C	0.840042	CTCF.p2:-19:0.840
chr17	80498173	80498353	reg1027188.p1	4.204	+	TSC_hg19_v1_chr17_+_80477607 NM_004514	-20673	+	TSC_hg19_v1_chr17_+_80416616 BC016440 CU674220 CU677625	-81621	+	TSC_hg19_v1_chr17_+_80416583 AK297875 NM_001083608 NM_012336 NM_031968 BC000438 AK000929 AK303155 AK307351 AF128406	-81700	+	TSC_hg19_v1_chr17_-_80606321 AK297477 BC000974 AM182326 AB464355 BC007838 NM_019613	108020	-	TSC_hg19_v1_chr17_-_80656575 BC035814 U05227 AB209711 BC018039 NM_006822	158271	-	TSC_hg19_v1_chr17_+_80674622 NM_024619 AK293523 AK301958 AK315373 BC007611 AK022233 AL136631 AY360465 BC014408 AB385548 CU676977 CR533461	176343	+	NM_004514|FOXK2|3607|forkhead box K2##BC016440|NARF|26502|nuclear prelamin A recognition factor##AK297875|NARF|26502|nuclear prelamin A recognition factor##NM_001083608|NARF|26502|nuclear prelamin A recognition factor##NM_012336|NARF|26502|nuclear prelamin A recognition factor##NM_031968|NARF|26502|nuclear prelamin A recognition factor##BC000438|NARF|26502|nuclear prelamin A recognition factor##AK000929|NARF|26502|nuclear prelamin A recognition factor##AK303155|NARF|26502|nuclear prelamin A recognition factor##AF128406|NARF|26502|nuclear prelamin A recognition factor##AK297477|WDR45L|56270|WDR45-like##BC000974|WDR45L|56270|WDR45-like##AM182326|WDR45L|56270|WDR45-like##BC007838|WDR45L|56270|WDR45-like##NM_019613|WDR45L|56270|WDR45-like##BC035814|RAB40B|10966|RAB40B, member RAS oncogene family##U05227|RAB40B|10966|RAB40B, member RAS oncogene family##AB209711|RAB40B|10966|RAB40B, member RAS oncogene family##BC018039|RAB40B|10966|RAB40B, member RAS oncogene family##NM_006822|RAB40B|10966|RAB40B, member RAS oncogene family##NM_024619|FN3KRP|79672|fructosamine 3 kinase related protein##AK293523|FN3KRP|79672|fructosamine 3 kinase related protein##AK301958|FN3KRP|79672|fructosamine 3 kinase related protein##AK315373|FN3KRP|79672|fructosamine 3 kinase related protein##BC007611|FN3KRP|79672|fructosamine 3 kinase related protein##AK022233|FN3KRP|79672|fructosamine 3 kinase related protein##AL136631|FN3KRP|79672|fructosamine 3 kinase related protein##AY360465|FN3KRP|79672|fructosamine 3 kinase related protein##BC014408|FN3KRP|79672|fructosamine 3 kinase related protein##CR533461|FN3KRP|79672|fructosamine 3 kinase related protein	0.0	
chr19	17259063	17259129	reg1036165.p1	4.204	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-72503	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-72775	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-121556	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	67076	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	67109	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	77938	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.0	
chr20	52509540	52509720	reg1022757.p1	4.204	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-298831	-	AF041259 NM_006526	-309995	-	AK302570 NM_001193421	-707809	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	177432	-	AK315220 NM_003657	177673	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	280890	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr8	42910801	42910872	reg1037008.p1	4.204	+	TSC_hg19_v1_chr8_+_42752142 BC056146	-158690	+	TSC_hg19_v1_chr8_+_42752090 AK309224	-158748	+	TSC_hg19_v1_chr8_+_42752068 BC048304 NM_032410	-158784	+	TSC_hg19_v1_chr8_+_42911465 NM_002027 BC037295 AK292121 L00634 BC084566 L10413 AB590505 BT009854 BC017029	632	+	TSC_hg19_v1_chr8_+_42948657 NM_032237	37817	+	AK027009 TSC_hg19_v1_chr8_+_42948660	37831	+	BC056146|HOOK3|84376|hook homolog 3 (Drosophila)##AK309224|HOOK3|84376|hook homolog 3 (Drosophila)##BC048304|HOOK3|84376|hook homolog 3 (Drosophila)##NM_032410|HOOK3|84376|hook homolog 3 (Drosophila)##NM_002027|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC037295|FNTA|2339|farnesyltransferase, CAAX box, alpha##AK292121|FNTA|2339|farnesyltransferase, CAAX box, alpha##L00634|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC084566|FNTA|2339|farnesyltransferase, CAAX box, alpha##L10413|FNTA|2339|farnesyltransferase, CAAX box, alpha##BT009854|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC017029|FNTA|2339|farnesyltransferase, CAAX box, alpha##NM_032237|SGK196|84197|protein kinase-like protein SgK196	0.0	
chr10	22886250	22886346	reg1033521.p1	4.203	+	TSC_hg19_v1_chr10_+_22726003 AK295718	-160299	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-251842	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-276133	+	AK294817 TSC_hg19_v1_chr10_-_23003038	116739	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	117192	-	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	330683	+	AK295718|LOC100289455|100289455|uncharacterized LOC100289455##NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3	0.0	
chr10	85677389	85677524	reg1032995.p1	4.203	+	DQ857894 NM_001165973	-2040014	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-2042374	+	AK123978 NM_001145719	-3376882	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	221801	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	254336	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	256103	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.0	
chr12	40656608	40656687	reg1035903.p2	4.203	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	-37788	+	TSC_hg19_v1_chr12_-_40499870 BC047507	-156775	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	-156958	-	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	429635	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	925561	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	1174940	+	NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4	0.0	
chr12	90575114	90575237	reg1031297.p1	4.203	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-471630	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-472488	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-525324	-	BC026075 BC024183 BC027600 BC034491 NM_152638	773776	-	U59111 TSC_hg19_v1_chr12_-_91398750	823572	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	823604	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.0	
chr15	99394118	99394204	reg1006078.p1	4.203	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-201405	+	TSC_hg19_v1_chr15_+_99191767 AB425196	-202190	+	AK097062 AK097062 NM_182562	-336551	-	BC104743 BC104744 BC105686 NM_001102612	154676	-	AK058162 NM_001167902	156862	-	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	251079	+	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein	0.0	
chr19	4639020	4639147	reg1031208.p1	4.203	+	BC142617 TSC_hg19_v1_chr19_-_4559731 AK300037 NM_032108	-79342	-	AK127689 BC070198 TSC_hg19_v1_chr19_-_4540114	-98983	-	AF403428 NM_052972 BC034389 AB073607 AK027382 AK303861 AK314506 TSC_hg19_v1_chr19_-_4540049	-99039	-	NM_152362 TSC_hg19_v1_chr19_+_4639539 BC017672 AK097251	455	+	NM_001167942	945	+	BC003639 AL365373 AL365374 AF282264 AB590867 BC014655 AK098829 TSC_hg19_v1_chr19_-_4670355	31260	-	BC142617|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##AK300037|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##NM_032108|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##BC070198|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AF403428|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_052972|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##BC034389|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AB073607|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK027382|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK303861|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK314506|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_152362|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC017672|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##AK097251|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##NM_001167942|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC003639|C19orf10|56005|chromosome 19 open reading frame 10##AL365373|C19orf10|56005|chromosome 19 open reading frame 10##AL365374|C19orf10|56005|chromosome 19 open reading frame 10##AF282264|C19orf10|56005|chromosome 19 open reading frame 10##BC014655|C19orf10|56005|chromosome 19 open reading frame 10##AK098829|C19orf10|56005|chromosome 19 open reading frame 10	0.0	
chr19	57862387	57862503	reg1025902.p1	4.203	+	TSC_hg19_v1_chr19_+_57831849 NM_213598 AK131547	-30531	+	TSC_hg19_v1_chr19_+_57791852 AK292144 NM_006635 AK074582 AY329492	-70558	+	TSC_hg19_v1_chr19_+_57791351 AK298106	-71089	+	TSC_hg19_v1_chr19_+_57862669 NM_020657 AJ276316 BC111531 BC111532	218	+	AF058918 AF291676 AK055662 NM_173631 BC008889 BC032809 BC042681 AL832545 BC064426 AK291464	12471	+	TSC_hg19_v1_chr19_+_57901221 BC030788 NM_001172773 NM_152909 AK057494	38806	+	NM_213598|ZNF543|125919|zinc finger protein 543##AK131547|ZNF543|125919|zinc finger protein 543##AK292144|ZNF460|10794|zinc finger protein 460##NM_006635|ZNF460|10794|zinc finger protein 460##AK074582|ZNF460|10794|zinc finger protein 460##AY329492|ZNF460|10794|zinc finger protein 460##AK298106|ZNF460|10794|zinc finger protein 460##NM_020657|ZNF304|57343|zinc finger protein 304##AJ276316|ZNF304|57343|zinc finger protein 304##BC111531|ZNF304|57343|zinc finger protein 304##BC111532|ZNF304|57343|zinc finger protein 304##AF058918|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##AF291676|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##AK055662|ZNF547|284306|zinc finger protein 547##NM_173631|ZNF547|284306|zinc finger protein 547##BC008889|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##BC032809|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##BC042681|ZNF547|284306|zinc finger protein 547##AL832545|ZNF547|284306|zinc finger protein 547##AK291464|ZNF547|284306|zinc finger protein 547##BC030788|ZNF548|147694|zinc finger protein 548##NM_001172773|ZNF548|147694|zinc finger protein 548##NM_152909|ZNF548|147694|zinc finger protein 548##AK057494|ZNF548|147694|zinc finger protein 548	0.0	
chr20	19975733	19975914	reg1002195.p1	4.203	+	TSC_hg19_v1_chr20_+_19955789 M37190	-19964	+	TSC_hg19_v1_chr20_+_19915762 BC034698 AL136924	-60074	+	BC128065 NM_018993 TSC_hg19_v1_chr20_+_19870217 AB060339	-105596	+	TSC_hg19_v1_chr20_+_19997934 NM_016100 NM_181528	22110	+	TSC_hg19_v1_chr20_+_19997975 AF085355 AK311819 BC008446	22146	+	TSC_hg19_v1_chr20_+_19998005 AL136641 BC005181	22176	+	M37190|RIN2|54453|Ras and Rab interactor 2##BC034698|RIN2|54453|Ras and Rab interactor 2##AL136924|RIN2|54453|Ras and Rab interactor 2##BC128065|RIN2|54453|Ras and Rab interactor 2##NM_018993|RIN2|54453|Ras and Rab interactor 2##AB060339|RIN2|54453|Ras and Rab interactor 2##NM_016100|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##NM_181528|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##AF085355|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##AK311819|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##BC008446|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##AL136641|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit##BC005181|NAA20|51126|N(alpha)-acetyltransferase 20, NatB catalytic subunit	0.0	
chr7	126894080	126894180	reg1031314.p2	4.203	+	TSC_hg19_v1_chr7_-_126893165 AK290197	-978	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	-1765	-	NM_000845	-10562	-	TSC_hg19_v1_chr7_-_127032759 AF218032 NM_176814 AK309674 BC047641	138628	-	AF525417 AK315472 BC078665 TSC_hg19_v1_chr7_-_127225651	331409	-	BC014100 NM_024523 TSC_hg19_v1_chr7_-_127225654	331542	-	AK290197|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AF218032|ZNF800|168850|zinc finger protein 800##NM_176814|ZNF800|168850|zinc finger protein 800##AK309674|ZNF800|168850|zinc finger protein 800##BC047641|ZNF800|168850|zinc finger protein 800##AF525417|GCC1|79571|GRIP and coiled-coil domain containing 1##AK315472|GCC1|79571|GRIP and coiled-coil domain containing 1##BC078665|GCC1|79571|GRIP and coiled-coil domain containing 1##BC014100|GCC1|79571|GRIP and coiled-coil domain containing 1##NM_024523|GCC1|79571|GRIP and coiled-coil domain containing 1	0.439649	CTCF.p2:8:0.440
chr8	136742542	136742646	reg1032664.p1	4.203	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-272393	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-272936	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1017320	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2766512	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	3183650	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3972688	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.819592	CTCF.p2:9:0.820
chr9	132861809	132861989	reg1009369.p1	4.203	+	TSC_hg19_v1_chr9_+_132816199 AK026244 AK225456 BC030147 AF376725 AX776003 BC110518 AK293092 AB385490 AB046844	-45683	+	TSC_hg19_v1_chr9_+_132816196 BC143655	-45708	+	BC039728 NM_001136557 NM_001136558 NM_020960	-45915	+	AK024651 TSC_hg19_v1_chr9_+_132897386	35465	+	TSC_hg19_v1_chr9_+_132934685 BC004856 NM_014286 AF134479 AF186409 X84048 AB463656	72914	+	NM_001128826	100972	+	AK026244|GPR107|57720|G protein-coupled receptor 107##AK225456|GPR107|57720|G protein-coupled receptor 107##BC030147|GPR107|57720|G protein-coupled receptor 107##AF376725|GPR107|57720|G protein-coupled receptor 107##BC110518|GPR107|57720|G protein-coupled receptor 107##AK293092|GPR107|57720|G protein-coupled receptor 107##AB046844|GPR107|57720|G protein-coupled receptor 107##BC143655|GPR107|57720|G protein-coupled receptor 107##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107##AK024651|GPR107|57720|G protein-coupled receptor 107##BC004856|NCS1|23413|neuronal calcium sensor 1##NM_014286|NCS1|23413|neuronal calcium sensor 1##AF134479|NCS1|23413|neuronal calcium sensor 1##AF186409|NCS1|23413|neuronal calcium sensor 1##X84048|NCS1|23413|neuronal calcium sensor 1##NM_001128826|NCS1|23413|neuronal calcium sensor 1	0.0	
chr14	62104263	62104404	reg1032405.p2	4.202	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-315806	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-355811	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-356139	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	57857	+	FJ790247 NM_001243084	60006	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	124786	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.0	
chr17	37950650	37950829	reg1033994.p1	4.202	+	AK290115 NM_001242443	-54520	+	AK125544 NM_001242442	-55716	+	AK294620 NM_001030002 BC006535 TSC_hg19_v1_chr17_+_37894600	-56160	+	BC032707 AF129512 AY377973 AY377975 AY377976 AY377977 AY377978 AY377979 AY377980 AY377981 AY377982 NM_012481 NM_183228 NM_183229 NM_183230 NM_183231 NM_183232	69691	-	AK292383 NM_198844 NM_199321 BC043152 AY251603 AY251604	73704	+	AF119884 NM_018530	123053	-	AK290115|GRB7|2886|growth factor receptor-bound protein 7##NM_001242443|GRB7|2886|growth factor receptor-bound protein 7##AK125544|GRB7|2886|growth factor receptor-bound protein 7##NM_001242442|GRB7|2886|growth factor receptor-bound protein 7##AK294620|GRB7|2886|growth factor receptor-bound protein 7##NM_001030002|GRB7|2886|growth factor receptor-bound protein 7##BC006535|GRB7|2886|growth factor receptor-bound protein 7##BC032707|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AF129512|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377973|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377975|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377976|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377977|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377978|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377979|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377980|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377981|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377982|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_012481|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183228|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183229|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183230|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183231|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183232|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AK292383|ZPBP2|124626|zona pellucida binding protein 2##NM_198844|ZPBP2|124626|zona pellucida binding protein 2##NM_199321|ZPBP2|124626|zona pellucida binding protein 2##BC043152|ZPBP2|124626|zona pellucida binding protein 2##AY251603|ZPBP2|124626|zona pellucida binding protein 2##AY251604|ZPBP2|124626|zona pellucida binding protein 2##AF119884|GSDMB|55876|gasdermin B##NM_018530|GSDMB|55876|gasdermin B	0.0	
chr18	46458676	46458856	reg1029957.p1	4.202	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-392993	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-523057	-	AM988836 AK296709 NM_001039360 EF120357	-795067	-	AK131394 NM_001190823	10381	-	AK301535 NM_001190822	16936	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	18001	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.0	
chr22	29196843	29196981	reg1031875.p2	4.202	+	TSC_hg19_v1_chr22_+_29196668 AF086143	-229	+	TSC_hg19_v1_chr22_-_29196555 BC012841 AK292188 AK313761 NM_001079539 NM_005080	-345	-	BC015709 TSC_hg19_v1_chr22_-_29196526 AB463352 AM393640 CU013207 CU013495 DQ890989 DQ894165 CU674466 CR456611 AB076383 AB076384 BC000938 M31627	-421	-	TSC_hg19_v1_chr22_+_29279579 NM_001206998 AB051436 CR456397	82865	+	AK096397 NM_032173	116464	+	TSC_hg19_v1_chr22_+_29449893 BC042614	253013	+	BC012841|XBP1|7494|X-box binding protein 1##AK292188|XBP1|7494|X-box binding protein 1##AK313761|XBP1|7494|X-box binding protein 1##NM_001079539|XBP1|7494|X-box binding protein 1##NM_005080|XBP1|7494|X-box binding protein 1##BC015709|XBP1|7494|X-box binding protein 1##AM393640|XBP1|7494|X-box binding protein 1##CU013207|XBP1|7494|X-box binding protein 1##CU013495|XBP1|7494|X-box binding protein 1##DQ890989|XBP1|7494|X-box binding protein 1##DQ894165|XBP1|7494|X-box binding protein 1##CR456611|XBP1|7494|X-box binding protein 1##AB076383|XBP1|7494|X-box binding protein 1##AB076384|XBP1|7494|X-box binding protein 1##BC000938|XBP1|7494|X-box binding protein 1##M31627|XBP1|7494|X-box binding protein 1##NM_001206998|ZNRF3|84133|zinc and ring finger 3##AB051436|ZNRF3|84133|zinc and ring finger 3##CR456397|ZNRF3|84133|zinc and ring finger 3##AK096397|ZNRF3|84133|zinc and ring finger 3##NM_032173|ZNRF3|84133|zinc and ring finger 3##BC042614|ZNRF3|84133|zinc and ring finger 3	0.0	
chr3	182510784	182510885	reg1034159.p2	4.202	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-1080696	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-1081121	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-1093442	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	453	+	AK296750 TSC_hg19_v1_chr3_+_182511291	461	+	TSC_hg19_v1_chr3_+_182511375 AF156548	555	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.0	
chr6	14816856	14816982	reg1033927.p2	4.202	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-698897	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-699014	+	NM_001251901	-699433	+	TSC_hg19_v1_chr6_+_15245702 AK302624	428798	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	429493	+	BC033996 TSC_hg19_v1_chr6_-_15248900	431982	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.910569	CTCF.p2:5:0.911
chr1	155916103	155916249	reg1032707.p1	4.201	+	NM_181885 BC101507 BC101509 AY170824 AY288415 AY394502 EU432129	-4687	+	TSC_hg19_v1_chr1_-_155904201 AK225714	-11974	-	BC027182 TSC_hg19_v1_chr1_-_155904193 AB020714	-11986	-	TSC_hg19_v1_chr1_-_155939059 AM393305 BT007407 CU676564 DQ891489 DQ894678	22885	-	TSC_hg19_v1_chr1_-_155947967 AL512715 NM_004723	31769	-	TSC_hg19_v1_chr1_-_155948245 AF486838	32050	-	NM_181885|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##BC101507|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##BC101509|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY170824|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY288415|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY394502|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##EU432129|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AK225714|KIAA0907|22889|KIAA0907##BC027182|KIAA0907|22889|KIAA0907##AB020714|KIAA0907|22889|KIAA0907##AM393305|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##BT007407|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##DQ891489|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##DQ894678|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AL512715|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##NM_004723|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AF486838|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2	0.0	
chr11	82800211	82800331	reg1029047.p1	4.201	+	BC031316 TSC_hg19_v1_chr11_+_82783118	-17153	+	BC014213 NM_014488 TSC_hg19_v1_chr11_-_82782897 BX641138	-17374	-	AK312323 TSC_hg19_v1_chr11_-_82782872	-17398	-	NM_015885 TSC_hg19_v1_chr11_+_82868196 AK302606 AF046935 AK025103 AB020631 BC146778 BC110432 BC065384	68134	+	AK311356 TSC_hg19_v1_chr11_-_82904700	104431	-	TSC_hg19_v1_chr11_+_82904780 DQ508934 BC045621 AK310765 EF041819	104563	+	BC031316|LOC100506233|100506233|uncharacterized LOC100506233##BC014213|RAB30|27314|RAB30, member RAS oncogene family##NM_014488|RAB30|27314|RAB30, member RAS oncogene family##BX641138|RAB30|27314|RAB30, member RAS oncogene family##AK312323|RAB30|27314|RAB30, member RAS oncogene family##NM_015885|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK302606|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AF046935|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK025103|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AB020631|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC146778|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC110432|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC065384|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK311356|DKFZp547G183|55525|uncharacterized LOC55525##DQ508934|ANKRD42|338699|ankyrin repeat domain 42##BC045621|ANKRD42|338699|ankyrin repeat domain 42##AK310765|ANKRD42|338699|ankyrin repeat domain 42##EF041819|ANKRD42|338699|ankyrin repeat domain 42	0.0	
chr12	108913477	108913593	reg1033912.p1	4.201	+	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	-4453	+	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	-180451	-	NM_001142345	-199097	-	AB385287 D63879 TSC_hg19_v1_chr12_-_108954936 BC103706 BC093784 BC111983 BC143253 BC004547 BC024279 AB020880 AF387506 BC032601	41399	-	TSC_hg19_v1_chr12_-_108954945 AK225174 AK304834	41411	-	TSC_hg19_v1_chr12_-_108954952 AK290209	41429	-	AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##D63879|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC103706|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC093784|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC111983|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC143253|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC004547|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC024279|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AB020880|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AF387506|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC032601|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK225174|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK304834|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK290209|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3	0.634072	CTCF.p2:2:0.634
chr12	32414691	32414809	reg1034242.p1	4.201	+	AK313430 AK290188 NM_001003398 NM_001714 U90028 BC136372 TSC_hg19_v1_chr12_+_32260263	-154577	+	TSC_hg19_v1_chr12_+_32259750 BC010091	-155036	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	-302356	+	BC039708 BC063403 NM_139241 BC096746 AK057294 BC045552	240289	+	TSC_hg19_v1_chr12_+_32687260 AK303334	272513	+	TSC_hg19_v1_chr12_+_32832187 AK302565 NM_005690 NM_012062 NM_012063 AK311606	417407	+	AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)##U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK303334|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK302565|DNM1L|10059|dynamin 1-like##NM_005690|DNM1L|10059|dynamin 1-like##NM_012062|DNM1L|10059|dynamin 1-like##NM_012063|DNM1L|10059|dynamin 1-like##AK311606|DNM1L|10059|dynamin 1-like	0.0	
chr12	49760689	49760822	reg1030716.p2	4.201	+	TSC_hg19_v1_chr12_+_49760679 AK095582 NM_023071	-66	+	BC033236 NM_024902	-19715	+	TSC_hg19_v1_chr12_+_49740718 AK055747	-20052	+	TSC_hg19_v1_chr12_+_49761253 BC017767 AL833614 BC048299 AK292334 AK023202 BX648916 BC032441	639	+	TSC_hg19_v1_chr12_+_49932842 AB033108 NM_012284 BC144254 BC150602 AB022696 AB384589	172265	+	AY336730 NM_001012300	199466	-	AK095582|SPATS2|65244|spermatogenesis associated, serine-rich 2##NM_023071|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##AK055747|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2##AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2##BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2##AB033108|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##NM_012284|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC144254|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC150602|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AB022696|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AY336730|MCRS1|10445|microspherule protein 1##NM_001012300|MCRS1|10445|microspherule protein 1	0.0	
chr12	50147695	50147875	reg1033452.p1	4.201	+	BC036203 TSC_hg19_v1_chr12_+_50135987	-11814	+	NM_001098576 AK124849	-12193	+	TSC_hg19_v1_chr12_+_50135353 AK312238 BC000916 AF033095	-12427	+	TSC_hg19_v1_chr12_+_50156978 AK026605	9243	+	TSC_hg19_v1_chr12_-_50222197 NM_001037806	74414	-	CU690986 BC053560 BC040957 AK292194 NM_181708	89104	-	BC036203|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##NM_001098576|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK124849|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK312238|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##BC000916|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AF033095|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##AK026605|TMBIM6|7009|transmembrane BAX inhibitor motif containing 6##NM_001037806|NCKAP5L|57701|NCK-associated protein 5-like##BC053560|BCDIN3D|144233|BCDIN3 domain containing##BC040957|BCDIN3D|144233|BCDIN3 domain containing##AK292194|BCDIN3D|144233|BCDIN3 domain containing##NM_181708|BCDIN3D|144233|BCDIN3 domain containing	0.0	
chr17	75865822	75865927	reg1027642.p1	4.201	+	TSC_hg19_v1_chr17_+_75543021 AK096234	-322854	+	AK056495 NM_001113495	-394550	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-418485	+	BC039479 NM_001142640 NM_018996	134408	+	TSC_hg19_v1_chr17_-_76124768 AK074065	258898	-	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	258964	-	AK096234|LOC100507351|100507351|uncharacterized LOC100507351##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK074065|TMC6|11322|transmembrane channel-like 6##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6	0.0	
chr18	42548462	42548537	reg1028179.p2	4.201	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-287631	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-288385	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1691070	-	NM_001242692 AK292422	244453	+	AF349446 NM_007163	646266	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	755605	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.045665	
chr3	56745556	56745671	reg1031268.p2	4.201	+	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-28406	-	BC029354 NM_015224	-47540	-	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	-154367	+	AK293864 AB209661 NM_001128616	64056	-	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	90298	-	AY221117 NM_181727 BC126274 BC136498	348890	+	BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##BC029354|FAM208A|23272|family with sequence similarity 208, member A##NM_015224|FAM208A|23272|family with sequence similarity 208, member A##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12	0.303571	CTCF.p2:-19:0.304
chr5	88057232	88057407	reg1034006.p1	4.201	+	TSC_hg19_v1_chr5_-_87980643 AK125167	-76612	-	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	-88174	-	BC047059 TSC_hg19_v1_chr5_+_87564842	-492470	+	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	62354	-	TSC_hg19_v1_chr5_-_88179002 AK312472 L08895 AK307883 BC026341	121687	-	TSC_hg19_v1_chr5_-_88179279 NM_001193350 NM_002397	121966	-	AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##BC047059|LOC100505894|100505894|uncharacterized LOC100505894##EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C##AK312472|MEF2C|4208|myocyte enhancer factor 2C##L08895|MEF2C|4208|myocyte enhancer factor 2C##AK307883|MEF2C|4208|myocyte enhancer factor 2C##BC026341|MEF2C|4208|myocyte enhancer factor 2C##NM_001193350|MEF2C|4208|myocyte enhancer factor 2C##NM_002397|MEF2C|4208|myocyte enhancer factor 2C	0.0	
chr6	17885154	17885241	reg1033677.p2	4.201	+	Z25535 AB384675 AK295644 BC052965 NM_005124 TSC_hg19_v1_chr6_-_17707139 AB210024	-178295	-	TSC_hg19_v1_chr6_+_17600620 NM_016255 AK296393 AK312814 AF097027 BC047881	-284598	+	AK312362 NM_006366 TSC_hg19_v1_chr6_+_17393918 AL832154 AK295600 AK294215 AK293134 AK297538 AK308461 BC008481	-491415	+	AJ291578 AJ291579 BC127115 BC127116 AY014403 AY014404 TSC_hg19_v1_chr6_-_17987786	102563	-	TSC_hg19_v1_chr6_-_17987867 BC062673 NM_001105566 NM_001105567 NM_001105568 NM_001243423 NM_022113	102669	-	AY324850 BC103888 BC103889 BC103890 NM_198586	237653	-	Z25535|NUP153|9972|nucleoporin 153kDa##AK295644|NUP153|9972|nucleoporin 153kDa##BC052965|NUP153|9972|nucleoporin 153kDa##NM_005124|NUP153|9972|nucleoporin 153kDa##AB210024|NUP153|9972|nucleoporin 153kDa##NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1##AK296393|FAM8A1|51439|family with sequence similarity 8, member A1##AK312814|FAM8A1|51439|family with sequence similarity 8, member A1##AF097027|FAM8A1|51439|family with sequence similarity 8, member A1##BC047881|FAM8A1|51439|family with sequence similarity 8, member A1##AK312362|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##NM_006366|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AL832154|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK295600|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK294215|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK293134|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK297538|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK308461|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##BC008481|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AJ291578|KIF13A|63971|kinesin family member 13A##AJ291579|KIF13A|63971|kinesin family member 13A##BC127115|KIF13A|63971|kinesin family member 13A##BC127116|KIF13A|63971|kinesin family member 13A##AY014403|KIF13A|63971|kinesin family member 13A##AY014404|KIF13A|63971|kinesin family member 13A##BC062673|KIF13A|63971|kinesin family member 13A##NM_001105566|KIF13A|63971|kinesin family member 13A##NM_001105567|KIF13A|63971|kinesin family member 13A##NM_001105568|KIF13A|63971|kinesin family member 13A##NM_001243423|KIF13A|63971|kinesin family member 13A##NM_022113|KIF13A|63971|kinesin family member 13A##AY324850|NHLRC1|378884|NHL repeat containing 1##BC103888|NHLRC1|378884|NHL repeat containing 1##BC103889|NHLRC1|378884|NHL repeat containing 1##BC103890|NHLRC1|378884|NHL repeat containing 1##NM_198586|NHLRC1|378884|NHL repeat containing 1	0.0	
chr8	137506758	137506888	reg1024074.p1	4.201	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-1036622	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-1037165	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1781549	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2002283	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2419421	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3208459	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.0	
chr9	26975731	26975873	reg1043622.p1	4.201	+	TSC_hg19_v1_chr9_+_26956416 NM_001099224 NM_025103 AK023707 AK225570 BC023634 AY040325 BC107742	-19391	+	TSC_hg19_v1_chr9_-_26947445 AL133608 NM_001031689	-28351	-	TSC_hg19_v1_chr9_-_26947241 AF145020	-28552	-	BC126156 BC136298 AK222987 AK024955 BC056252 NM_022901	29867	-	AK294887 NM_000459	133340	+	BC137351 BC137352 BC144602 BC014307 AJ278482 NM_001161585 NM_020641	321319	-	NM_001099224|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##NM_025103|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AK023707|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AK225570|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##BC023634|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AY040325|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##BC107742|IFT74|80173|intraflagellar transport 74 homolog (Chlamydomonas)##AL133608|PLAA|9373|phospholipase A2-activating protein##NM_001031689|PLAA|9373|phospholipase A2-activating protein##AF145020|PLAA|9373|phospholipase A2-activating protein##BC126156|LRRC19|64922|leucine rich repeat containing 19##BC136298|LRRC19|64922|leucine rich repeat containing 19##AK222987|LRRC19|64922|leucine rich repeat containing 19##AK024955|LRRC19|64922|leucine rich repeat containing 19##BC056252|LRRC19|64922|leucine rich repeat containing 19##NM_022901|LRRC19|64922|leucine rich repeat containing 19##AK294887|TEK|7010|TEK tyrosine kinase, endothelial##NM_000459|TEK|7010|TEK tyrosine kinase, endothelial##BC137351|C9orf11|54586|chromosome 9 open reading frame 11##BC137352|C9orf11|54586|chromosome 9 open reading frame 11##BC144602|C9orf11|54586|chromosome 9 open reading frame 11##BC014307|C9orf11|54586|chromosome 9 open reading frame 11##AJ278482|C9orf11|54586|chromosome 9 open reading frame 11##NM_001161585|C9orf11|54586|chromosome 9 open reading frame 11##NM_020641|C9orf11|54586|chromosome 9 open reading frame 11	0.119844	
chrX	38487085	38487200	reg1035020.p2	4.201	+	TSC_hg19_v1_chrX_+_38420794 NM_004615 AB062057 L10373 BC018036 AK293534 AK293178 AK293552 AK312343 D10653 CU676142 DQ892093 DQ895571 D29808 AB102665	-66390	+	BC107153 BC107154 NM_000531 BC114496 AK292757 K02100 BC074745	-275318	+	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	-300347	-	TSC_hg19_v1_chrX_+_38660678 NM_001098790 NM_001098791	173526	+	TSC_hg19_v1_chrX_+_38660711 BC019332	173564	+	BC008908 NM_021242	175930	+	NM_004615|TSPAN7|7102|tetraspanin 7##AB062057|TSPAN7|7102|tetraspanin 7##L10373|TSPAN7|7102|tetraspanin 7##BC018036|TSPAN7|7102|tetraspanin 7##AK293534|TSPAN7|7102|tetraspanin 7##AK293178|TSPAN7|7102|tetraspanin 7##AK293552|TSPAN7|7102|tetraspanin 7##AK312343|TSPAN7|7102|tetraspanin 7##D10653|TSPAN7|7102|tetraspanin 7##DQ892093|TSPAN7|7102|tetraspanin 7##DQ895571|TSPAN7|7102|tetraspanin 7##D29808|TSPAN7|7102|tetraspanin 7##AB102665|TSPAN7|7102|tetraspanin 7##BC107153|OTC|5009|ornithine carbamoyltransferase##BC107154|OTC|5009|ornithine carbamoyltransferase##NM_000531|OTC|5009|ornithine carbamoyltransferase##BC114496|OTC|5009|ornithine carbamoyltransferase##AK292757|OTC|5009|ornithine carbamoyltransferase##K02100|OTC|5009|ornithine carbamoyltransferase##BC074745|OTC|5009|ornithine carbamoyltransferase##DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001098790|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_001098791|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC019332|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))	0.987954	CTCF.p2:-27:0.988
chr15	84234464	84234574	reg1031367.p1	4.200	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-118291	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-118459	+	L03427 NM_001717 TSC_hg19_v1_chr15_-_83953480	-281041	-	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	88308	+	NM_001243531	606722	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	909762	+	BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##L03427|BNC1|646|basonuclin 1##NM_001717|BNC1|646|basonuclin 1##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2	0.741124	CTCF.p2:0:0.741
chr1	856553	856653	reg1032799.p2	4.200	+	TSC_hg19_v1_chr1_+_763052 AK311121 AK311732 AK026873 BC102012 BC102023 BC107481	-93533	+	BC042880 TSC_hg19_v1_chr1_+_763038	-93590	+	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	-93708	-	TSC_hg19_v1_chr1_+_861084 NM_152486	4498	+	AB463150 AM393843 CU678496 TSC_hg19_v1_chr1_-_894632 AL050019 AK024284 AK225239 BC009786	38025	-	TSC_hg19_v1_chr1_-_894646 AK315080	38042	-	AK311732|LOC643837|643837|uncharacterized LOC643837##AK026873|LOC643837|643837|uncharacterized LOC643837##BC102012|LOC643837|643837|uncharacterized LOC643837##BC102023|LOC643837|643837|uncharacterized LOC643837##BC107481|LOC643837|643837|uncharacterized LOC643837##BC042880|LOC643837|643837|uncharacterized LOC643837##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115##NM_152486|SAMD11|148398|sterile alpha motif domain containing 11##AM393843|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AL050019|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK024284|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK225239|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##BC009786|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK315080|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)	0.762134	CTCF.p2:-20:0.719
chr19	10515188	10515369	reg1007500.p2	4.200	+	TSC_hg19_v1_chr19_-_10514250 NM_007065	-1022	-	TSC_hg19_v1_chr19_-_10514219 BC000083 BC008793 U63131	-1065	-	AB463478 AM393285 AM393349 BT006796 CR542249 DQ892174 DQ895369 U43077 TSC_hg19_v1_chr19_-_10514182	-1109	-	AY593872 NM_001243121 TSC_hg19_v1_chr19_+_10527555	12225	+	TSC_hg19_v1_chr19_+_10531189 L20965 NM_001111307	15952	+	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	26149	+	NM_007065|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC000083|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC008793|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U63131|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AM393285|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AM393349|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BT006796|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##CR542249|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ892174|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ895369|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U43077|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AY593872|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001243121|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##L20965|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111307|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific	0.255417	CTCF.p2:101:0.255
chr19	48763239	48763420	reg1008148.p1	4.200	+	TSC_hg19_v1_chr19_-_48759141 BC056891 BC034564 BC046136 NM_001184902 NM_001184904	-4158	-	AK125548 TSC_hg19_v1_chr19_+_48758936 BC060888 BC008448 BC033836	-4380	+	AB023172 AF322184 AF511652 TSC_hg19_v1_chr19_-_48753084 BC041697 BC045539 AK302327 AK311079 AK297045 BX648568 AK297069 NM_001184901 NM_001184903 NM_014959	-10305	-	AK075062 NM_153608	11324	+	BC007730 NM_144577	60002	-	TSC_hg19_v1_chr19_-_48825152 AK128144	61841	-	BC056891|CARD8|22900|caspase recruitment domain family, member 8##BC034564|CARD8|22900|caspase recruitment domain family, member 8##BC046136|CARD8|22900|caspase recruitment domain family, member 8##NM_001184902|CARD8|22900|caspase recruitment domain family, member 8##NM_001184904|CARD8|22900|caspase recruitment domain family, member 8##AK125548|LOC100505812|100505812|uncharacterized LOC100505812##BC060888|LOC100505812|100505812|uncharacterized LOC100505812##AB023172|CARD8|22900|caspase recruitment domain family, member 8##AF322184|CARD8|22900|caspase recruitment domain family, member 8##AF511652|CARD8|22900|caspase recruitment domain family, member 8##BC041697|CARD8|22900|caspase recruitment domain family, member 8##BC045539|CARD8|22900|caspase recruitment domain family, member 8##AK302327|CARD8|22900|caspase recruitment domain family, member 8##AK311079|CARD8|22900|caspase recruitment domain family, member 8##AK297045|CARD8|22900|caspase recruitment domain family, member 8##BX648568|CARD8|22900|caspase recruitment domain family, member 8##AK297069|CARD8|22900|caspase recruitment domain family, member 8##NM_001184901|CARD8|22900|caspase recruitment domain family, member 8##NM_001184903|CARD8|22900|caspase recruitment domain family, member 8##NM_014959|CARD8|22900|caspase recruitment domain family, member 8##AK075062|ZNF114|163071|zinc finger protein 114##NM_153608|ZNF114|163071|zinc finger protein 114##BC007730|CCDC114|93233|coiled-coil domain containing 114##NM_144577|CCDC114|93233|coiled-coil domain containing 114##AK128144|CCDC114|93233|coiled-coil domain containing 114	0.095159	
chr2	213592452	213592627	reg1033919.p1	4.200	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	-189224	-	AK316425 NM_001122634 AK302778 AY317138	-2134454	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-2171150	+	AK301503 AF130863 NM_016260	422516	-	BC028936 NM_001079526	423793	-	AK124960 NM_001242575	556389	-	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451	0.0	
chr22	22817570	22817714	reg1030435.p1	4.200	+	TSC_hg19_v1_chr22_+_22786291 L22588	-31353	+	TSC_hg19_v1_chr22_+_22764097 M97923 M97922 BC020233 BC022098 X80306 BC012876 BC073769 BC073770 X57811 AF490938 AJ131057 JF806287 U96044 L26900 L26908 L26901 HM996154 HM996200 HM996261 HM996384 HM996406 HM996445 AB064022 AY686890 HM996105 AB027448 AB063983 AB064005 AB114461 AB114463 AB114465 AB114467 AB114468 AB114470 AB114471 AB114472 AB363370 AB363380 AB363386 AB363387 AB363389 AB363390 AB363392 AB363393 AB363394 AF058065 AF058066 AF058067 AF060124 AF060127 AF063768 AF064495 AF064499 AF320834 AF320844 AF362765 AF394198 AJ238330 AJ276100 AJ298041 AJ399845 AJ399849 AJ399852 AJ399856 AJ399867 AJ399868 AJ399869 AM040515 AM040578 AM181362 AM181366 AY028996 AY942050 AY942088 AY942095 AY942098 AY942100 AY942127 DQ098691 DQ098693 DQ098745 DQ098749 DQ098786 DQ187499 DQ187503 DQ187571 DQ187623 DQ187624 DQ187625 DQ187626 DQ187694 DQ187719 DQ187722 DQ187723 DQ322742 DQ322810 DQ322821 DQ322822 DQ322823 DQ322874 DQ323004 DQ490721 DQ490722 DQ490723 DQ840923 DQ840924 DQ840925 DQ840930 DQ840933 DQ840937 DQ841069 DQ841085 DQ841092 DQ841094 DQ841095 DQ841098 DQ841102 DQ841104 DQ841105 DQ841106 DQ841107 DQ841108 DQ841109 DQ841110 DQ841111 DQ841112 DQ841114 DQ841115 DQ841116 DQ841117 EF589403 EF589431 EF589450 EF589512 EF589542 EF589558 EF710775 EF710776 EF710777 EF710778 EF710779 EF710780 EF710781 EF710782 EF711006 EF711007 EF711008 EF711009 EU599322 FJ385471 S73120 X91132 Z18835 DQ098692 X91133 DQ098695 HM996447 U09885 AF044481 AF044482 AF044483 AJ580928 X83712 X83713 AB114466 AY942023 AY062351 AY998675 DQ098694 DQ098812 DQ098765 AJ241371 X92997 X93002 X93004 AJ298616 U70235 AY062352 AY998672 AF103597 AF103703 AF103635 FJ385549 AF032355 AF103626 AF103705 AF103676 AF043584 AF103615 AF103648 AF103650 AF103714 AF043585 AF043587 AF043588 AF052823 AF043583 AY180392 AF043592 S42404 AF043589 AF043591	-53398	+	TSC_hg19_v1_chr22_+_22758538 GU179344	-59078	+	TSC_hg19_v1_chr22_-_22863061 BC040020	45439	-	AK097608 NM_080764	45862	-	BC053901 AK093108 NM_080740	56962	-	BC040020|ZNF280B|140883|zinc finger protein 280B##AK097608|ZNF280B|140883|zinc finger protein 280B##NM_080764|ZNF280B|140883|zinc finger protein 280B##BC053901|ZNF280A|129025|zinc finger protein 280A##AK093108|ZNF280A|129025|zinc finger protein 280A##NM_080740|ZNF280A|129025|zinc finger protein 280A	0.0637	
chr2	241436656	241436753	reg1033137.p2	4.200	+	TSC_hg19_v1_chr2_+_241375269 AK223516 BC045712	-61439	+	TSC_hg19_v1_chr2_+_241375207 BC027997	-61493	+	TSC_hg19_v1_chr2_+_241375079 BC051279 NM_002081 X54232	-61624	+	AK125881 TSC_hg19_v1_chr2_-_241495084	58326	-	AB034636 BC073146 BC036111 TSC_hg19_v1_chr2_-_241497400	60679	-	AK000506 AK225534 NM_016552 NM_017844 TSC_hg19_v1_chr2_-_241497404	60700	-	AK223516|GPC1|2817|glypican 1##BC045712|GPC1|2817|glypican 1##BC027997|GPC1|2817|glypican 1##BC051279|GPC1|2817|glypican 1##NM_002081|GPC1|2817|glypican 1##X54232|GPC1|2817|glypican 1##AK125881|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AB034636|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##BC073146|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##BC036111|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK000506|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK225534|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_016552|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_017844|ANKMY1|51281|ankyrin repeat and MYND domain containing 1	1.020588	CTCF.p2:-5:0.998
chr3	106285237	106285368	reg1028121.p1	4.200	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-697495	-	CR749655 TSC_hg19_v1_chr3_-_105421064	-864248	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-1199480	+	TSC_hg19_v1_chr3_-_106959482 BC036229	674177	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	674290	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	811008	+	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54	0.255956	CTCF.p2:49:0.256
chr3	131377103	131377205	reg1036136.p1	4.200	+	TSC_hg19_v1_chr3_-_131221816 CR456720 CU678442 BC002345 X06323 BC003375 AK301377 AK296626 NM_007208	-155400	-	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	-276503	+	TSC_hg19_v1_chr3_+_131080737 AK000532 BC015593	-296411	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	376686	-	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	659084	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	659134	+	CR456720|MRPL3|11222|mitochondrial ribosomal protein L3##X06323|MRPL3|11222|mitochondrial ribosomal protein L3##BC003375|MRPL3|11222|mitochondrial ribosomal protein L3##AK301377|MRPL3|11222|mitochondrial ribosomal protein L3##AK296626|MRPL3|11222|mitochondrial ribosomal protein L3##NM_007208|MRPL3|11222|mitochondrial ribosomal protein L3##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK000532|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##BC015593|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate	0.062159	
chr3	31283684	31283860	reg1034792.p1	4.200	+	AL832766 NM_207359	-347620	-	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-635369	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-635750	+	TSC_hg19_v1_chr3_+_31574119 AK311488	290358	+	TSC_hg19_v1_chr3_+_31574468 AK074587	290677	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	290710	+	AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.0	
chr3	46270662	46270755	reg1029855.p1	4.200	+	BC064991 TSC_hg19_v1_chr3_-_46249804 L10918 BC051306 NM_001295	-20899	-	AB189434 AB189435 NM_001024644 NM_005283	-201730	-	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	-233387	-	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	13208	+	AK292685 NM_001123041 NM_001123396	124521	+	TSC_hg19_v1_chr3_+_46395601 AK292920 U03905	124899	+	BC064991|CCR1|1230|chemokine (C-C motif) receptor 1##L10918|CCR1|1230|chemokine (C-C motif) receptor 1##BC051306|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001295|CCR1|1230|chemokine (C-C motif) receptor 1##AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2##AK292920|CCR2|729230|chemokine (C-C motif) receptor 2##U03905|CCR2|729230|chemokine (C-C motif) receptor 2	0.0	
chr7	107852213	107852320	reg1031739.p2	4.200	+	BC142619 BC140804 BC144591 AF028816 AK300385 NM_007356	-81474	-	AB384752 TSC_hg19_v1_chr7_-_107643594 BC113455 M61916 BX648251 AK303501 AK309921 AK307611 BC044633 BC052598 NM_002291	-208661	-	AK300077 TSC_hg19_v1_chr7_+_107531630 AK225289 AK310220 AB209703 BC018648 BC018696 J03620 AB529125 CU676276	-320610	+	AJ001057 AB385311 NM_001037132	28286	-	TSC_hg19_v1_chr7_-_108096830 BC114570 BC115736 AB002341 BX538010 AK299870 BC098401 NM_001193582 NM_001193583 NM_001193584 NM_005010	244663	-	TSC_hg19_v1_chr7_-_108142934 BC005203 AK002115	290706	-	BC142619|LAMB4|22798|laminin, beta 4##BC140804|LAMB4|22798|laminin, beta 4##BC144591|LAMB4|22798|laminin, beta 4##AF028816|LAMB4|22798|laminin, beta 4##AK300385|LAMB4|22798|laminin, beta 4##NM_007356|LAMB4|22798|laminin, beta 4##BC113455|LAMB1|3912|laminin, beta 1##M61916|LAMB1|3912|laminin, beta 1##BX648251|LAMB1|3912|laminin, beta 1##AK303501|LAMB1|3912|laminin, beta 1##AK309921|LAMB1|3912|laminin, beta 1##AK307611|LAMB1|3912|laminin, beta 1##BC044633|LAMB1|3912|laminin, beta 1##BC052598|LAMB1|3912|laminin, beta 1##NM_002291|LAMB1|3912|laminin, beta 1##AK300077|DLD|1738|dihydrolipoamide dehydrogenase##AK225289|DLD|1738|dihydrolipoamide dehydrogenase##AK310220|DLD|1738|dihydrolipoamide dehydrogenase##AB209703|DLD|1738|dihydrolipoamide dehydrogenase##BC018648|DLD|1738|dihydrolipoamide dehydrogenase##BC018696|DLD|1738|dihydrolipoamide dehydrogenase##J03620|DLD|1738|dihydrolipoamide dehydrogenase##AJ001057|NRCAM|4897|neuronal cell adhesion molecule##NM_001037132|NRCAM|4897|neuronal cell adhesion molecule##BC114570|NRCAM|4897|neuronal cell adhesion molecule##BC115736|NRCAM|4897|neuronal cell adhesion molecule##AB002341|NRCAM|4897|neuronal cell adhesion molecule##BX538010|NRCAM|4897|neuronal cell adhesion molecule##AK299870|NRCAM|4897|neuronal cell adhesion molecule##BC098401|NRCAM|4897|neuronal cell adhesion molecule##NM_001193582|NRCAM|4897|neuronal cell adhesion molecule##NM_001193583|NRCAM|4897|neuronal cell adhesion molecule##NM_001193584|NRCAM|4897|neuronal cell adhesion molecule##NM_005010|NRCAM|4897|neuronal cell adhesion molecule##BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8##AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8	0.0	
chr7	887533	887628	reg1030213.p2	4.200	+	BC142707 NM_001130965 AB463335 CU680640	-15432	+	NM_001171944 NM_001171945 NM_025154 TSC_hg19_v1_chr7_+_856279 AK022816 AK302896 AK309120 AK022469 BX538211 BC151827 AB018353 BC152418	-31298	+	BC013613 NM_001171946	-32387	+	TSC_hg19_v1_chr7_+_916188 NM_015949	28623	+	TSC_hg19_v1_chr7_+_916249 BC003550 AK023560 AF132954	28690	+	AK300644 AK300859 TSC_hg19_v1_chr7_-_960513	72934	-	BC142707|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001130965|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171944|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171945|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_025154|SUN1|23353|Sad1 and UNC84 domain containing 1##AK022816|SUN1|23353|Sad1 and UNC84 domain containing 1##AK302896|SUN1|23353|Sad1 and UNC84 domain containing 1##AK309120|SUN1|23353|Sad1 and UNC84 domain containing 1##AK022469|SUN1|23353|Sad1 and UNC84 domain containing 1##BX538211|SUN1|23353|Sad1 and UNC84 domain containing 1##BC151827|SUN1|23353|Sad1 and UNC84 domain containing 1##AB018353|SUN1|23353|Sad1 and UNC84 domain containing 1##BC152418|SUN1|23353|Sad1 and UNC84 domain containing 1##BC013613|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171946|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_015949|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##BC003550|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK023560|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AF132954|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK300644|ADAP1|11033|ArfGAP with dual PH domains 1##AK300859|ADAP1|11033|ArfGAP with dual PH domains 1	0.0	
chrX	24303351	24303482	reg1033630.p1	4.200	+	X59739 X59740 TSC_hg19_v1_chrX_+_24167864	-135544	+	AB209892 NM_001178086 NM_001178095 X59738 TSC_hg19_v1_chrX_+_24167845 NM_001178084 NM_001178085 NM_003410	-135624	+	TSC_hg19_v1_chrX_+_24073072 AK222577 AK290397 AK312247 AB590041 CU676476 DQ891794 DQ894977 AB451230 AB451353 L19161	-230338	+	NM_001136233	28015	-	NM_001136234	77461	+	NM_001142386 NM_005391 AK301965 TSC_hg19_v1_chrX_+_24483405 BC015948 L42452 CU677533	180041	+	X59739|ZFX|7543|zinc finger protein, X-linked##X59740|ZFX|7543|zinc finger protein, X-linked##AB209892|ZFX|7543|zinc finger protein, X-linked##NM_001178086|ZFX|7543|zinc finger protein, X-linked##NM_001178095|ZFX|7543|zinc finger protein, X-linked##X59738|ZFX|7543|zinc finger protein, X-linked##NM_001178084|ZFX|7543|zinc finger protein, X-linked##NM_001178085|ZFX|7543|zinc finger protein, X-linked##NM_003410|ZFX|7543|zinc finger protein, X-linked##AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##NM_001136233|FAM48B2|170067|family with sequence similarity 48, member B2##NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1##NM_001142386|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_005391|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AK301965|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##BC015948|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##L42452|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3	0.597436	CTCF.p2:13:0.597
chr13	113098285	113098355	reg1004880.p1	4.199	+	AK130866 NM_145248 BC016750	-67661	+	NM_005986	-376408	+	BC029889 NM_152324	-1125306	+	AJ003061 AJ003062 BT009772 CU680680 DQ891072 DQ894255 AF042378 TSC_hg19_v1_chr13_-_113242450 BC013781 AK302537 BC007763	144052	-	TSC_hg19_v1_chr13_-_113242468 BC046634 NM_006322	144153	-	TSC_hg19_v1_chr13_-_113242484 AK314785	144171	-	AK130866|SPACA7|122258|sperm acrosome associated 7##NM_145248|SPACA7|122258|sperm acrosome associated 7##BC016750|SPACA7|122258|sperm acrosome associated 7##NM_005986|SOX1|6656|SRY (sex determining region Y)-box 1##BC029889|C13orf16|121793|chromosome 13 open reading frame 16##NM_152324|C13orf16|121793|chromosome 13 open reading frame 16##AJ003061|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AJ003062|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BT009772|TUBGCP3|10426|tubulin, gamma complex associated protein 3##DQ891072|TUBGCP3|10426|tubulin, gamma complex associated protein 3##DQ894255|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AF042378|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC013781|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK302537|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC007763|TUBGCP3|10426|tubulin, gamma complex associated protein 3##BC046634|TUBGCP3|10426|tubulin, gamma complex associated protein 3##NM_006322|TUBGCP3|10426|tubulin, gamma complex associated protein 3##AK314785|TUBGCP3|10426|tubulin, gamma complex associated protein 3	0.0	
chr14	68773082	68773239	reg1034930.p2	4.199	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-486640	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-489861	-	AK315462 NM_152443	-604558	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	486560	-	NM_001244698 NM_004926	487470	-	NM_001244701 AB528867	489824	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr14	72981175	72981259	reg1000868.p2	4.199	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-581351	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-582064	+	AK294895 NM_001204423	-582401	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	379591	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	411918	+	AK098542 AF311602 NM_178441	472440	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.0	
chr1	76620466	76620585	reg1009127.p3	4.199	+	TSC_hg19_v1_chr1_+_76540430 NM_001160011 NM_152996 AK091215 AX746855 BC059363 AK297363 AY358540 AJ507291 CU691350	-80063	+	AF403035 CU691378 BC022517 AF429968 BC036573 AK098606 NM_080868	-222480	-	NM_002440 BC033030 U89293 AF104243 AB528458 CU689598 DQ891259 DQ894445	-357913	+	TSC_hg19_v1_chr1_+_77165439 D28460	544915	+	TSC_hg19_v1_chr1_+_77333125 AK056241	712602	+	TSC_hg19_v1_chr1_+_77333164 AK095758 AK300902 AK295019 BC001201 NM_030965	712646	+	NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17##AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17##AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_002440|MSH4|4438|mutS homolog 4 (E. coli)##BC033030|MSH4|4438|mutS homolog 4 (E. coli)##U89293|MSH4|4438|mutS homolog 4 (E. coli)##AF104243|MSH4|4438|mutS homolog 4 (E. coli)##DQ891259|MSH4|4438|mutS homolog 4 (E. coli)##DQ894445|MSH4|4438|mutS homolog 4 (E. coli)##D28460|TPI1|7167|triosephosphate isomerase 1##AK056241|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK095758|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK300902|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK295019|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##BC001201|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##NM_030965|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	0.045963	
chr2	232717126	232717234	reg1028291.p1	4.199	+	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-66064	+	TSC_hg19_v1_chr2_+_232646442 AK307486	-70743	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	-71255	-	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	73853	-	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	109180	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	526203	+	AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK307486|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental	0.999909	CTCF.p2:-9:1.000
chr4	2356038	2356145	reg1028781.p2	4.199	+	TSC_hg19_v1_chr4_-_2263830 BC002713	-92268	-	AB463859 BT019969 BT019970 AF040963 AF082740 NM_006454 TSC_hg19_v1_chr4_-_2263788 BC068060	-92339	-	AK056134 AK293948 AK303673 TSC_hg19_v1_chr4_-_2243849 CR749640 NM_024511 BC003648	-112223	-	BC035793 AK294874 TSC_hg19_v1_chr4_-_2366542 AK316484 NM_001172659 NM_001172660	10475	-	TSC_hg19_v1_chr4_-_2420373 BC137309 BC137310 BC053664 AB046863 BC032605 NM_001172656 NM_001172657 NM_001172658 NM_020972 AK294710	64313	-	TSC_hg19_v1_chr4_+_2420681 AK126028 NM_001193282	64606	+	BC002713|MXD4|10608|MAX dimerization protein 4##BT019969|MXD4|10608|MAX dimerization protein 4##BT019970|MXD4|10608|MAX dimerization protein 4##AF040963|MXD4|10608|MAX dimerization protein 4##AF082740|MXD4|10608|MAX dimerization protein 4##NM_006454|MXD4|10608|MAX dimerization protein 4##BC068060|MXD4|10608|MAX dimerization protein 4##AK056134|HAUS3|79441|HAUS augmin-like complex, subunit 3##AK293948|HAUS3|79441|HAUS augmin-like complex, subunit 3##AK303673|POLN|353497|polymerase (DNA directed) nu##CR749640|HAUS3|79441|HAUS augmin-like complex, subunit 3##NM_024511|HAUS3|79441|HAUS augmin-like complex, subunit 3##BC003648|HAUS3|79441|HAUS augmin-like complex, subunit 3##BC035793|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AK294874|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AK316484|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172659|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172660|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC137309|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC137310|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC053664|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AB046863|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC032605|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172656|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172657|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172658|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_020972|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AK294710|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001193282|LOC402160|402160|uncharacterized LOC402160	0.524762	CTCF.p2:8:0.525
chr1	47400639	47400769	reg1034231.p2	4.198	+	AK300921 NM_000779 NM_001099772 AK225576 AK225578 AK313170 BC017758 AK307715 J02871 DQ892010 DQ895199 CU676044 AF491285 AY064484 AY064485 AY064486 AY151048 AY151049 X16699	-135993	+	TSC_hg19_v1_chr1_-_47184796 AK296777	-215888	-	TSC_hg19_v1_chr1_-_47184742 AB007963 NM_014774	-215968	-	TSC_hg19_v1_chr1_-_47407139 AK298267 AK298413 CU692736 D26481 D13705 L04751 BC041158 S67580 S67581	6413	-	TSC_hg19_v1_chr1_-_47407149 BC022851 NM_000778	6444	-	BC028102 NM_178033 AK098065 AY358537 AM040940 DQ891655 DQ891656 DQ894843 EU176287 CU688398	88659	+	AK300921|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##NM_000779|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##NM_001099772|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK225576|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK225578|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK313170|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##BC017758|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AK307715|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##J02871|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##DQ892010|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##DQ895199|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AF491285|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY064484|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY064485|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY064486|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY151048|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AY151049|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##X16699|CYP4B1|1580|cytochrome P450, family 4, subfamily B, polypeptide 1##AB007963|KIAA0494|9813|KIAA0494##NM_014774|KIAA0494|9813|KIAA0494##AK298267|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##AK298413|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##D26481|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##D13705|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##L04751|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC041158|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##S67580|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##S67581|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC022851|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##NM_000778|CYP4A11|1579|cytochrome P450, family 4, subfamily A, polypeptide 11##BC028102|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##NM_178033|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AK098065|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AY358537|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AM040940|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891655|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891656|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ894843|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##EU176287|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1	0.941746	CTCF.p2:18:0.942
chr3	171171100	171171212	reg1035643.p1	4.198	+	NM_000340	-426389	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-426623	-	AB528020 J03810 TSC_hg19_v1_chr3_-_170744510 AK313622 BC060041 AK290846 AK292741	-426666	-	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	6915	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	357099	-	NM_001164436 AK026825	389992	+	NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##J03810|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK313622|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##BC060041|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK290846|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK292741|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212	0.666043	CTCF.p2:54:0.666
chr3	65900499	65900653	reg1033394.p1	4.198	+	TSC_hg19_v1_chr3_-_64673677 BC036770 AK310571	-1226890	-	TSC_hg19_v1_chr3_-_64673334 AF261918 BC130578 BC171764 AF488803 NM_182920	-1227229	-	AB037733 TSC_hg19_v1_chr3_-_64672299	-1228281	-	BC062367 NM_001033057 NM_004742 NM_015520 TSC_hg19_v1_chr3_-_66024518	123937	-	AK092495 AX747571 NM_173471	218708	+	NM_001164796	370591	+	BC036770|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AK310571|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##NM_001164796|SLC25A26|115286|solute carrier family 25, member 26	0.011367	
chr4	117101382	117101512	reg1027447.p1	4.198	+	BC113075 BC012326 AK289670 AB036429 NM_022569	-1066466	-	NM_003360 U30930	-1557925	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-1581864	+	AK074617 BC030831 NM_152402	905286	-	TSC_hg19_v1_chr4_+_118954764 AY358852	1853324	+	AF074924 NM_004784 BC034037 AK295439 BC109309 BC109310	1854128	+	BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AF074924|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##NM_004784|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC034037|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##AK295439|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109309|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3##BC109310|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.979318	CTCF.p2:-41:0.979
chr5	14208902	14209043	reg1031049.p1	4.198	+	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	-65300	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-197102	-	AX800026 AY045575 NM_001369	-264384	-	TSC_hg19_v1_chr5_+_14488527 AK131423	279567	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	372928	+	TSC_hg19_v1_chr5_+_14581949 AK001989 BC011524 CU679940	372992	+	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A##AK001989|FAM105A|54491|family with sequence similarity 105, member A##BC011524|FAM105A|54491|family with sequence similarity 105, member A	0.126072	
chr7	74573774	74573867	reg1024586.p2	4.198	+	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	-65446	+	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	-84128	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	-84182	-	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	293700	-	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	414750	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	451145	+	NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73	0.626159	CTCF.p2:-4:0.626
chr8	135614178	135614337	reg1022478.p2	4.198	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-1030160	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-1304760	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1410927	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	94537	-	TSC_hg19_v1_chr8_-_135725053 AB463359	110822	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	111017	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr10	89623293	89623417	reg1030371.p2	4.197	+	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	-129	+	EU552092 NM_001126049	-162	-	TSC_hg19_v1_chr10_-_89577921 AK075223 NM_032810	-45453	-	TSC_hg19_v1_chr10_+_89623380 BC005821	34	+	TSC_hg19_v1_chr10_+_89623420 U96180	72	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	719659	-	NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##EU552092|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_001126049|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##AK075223|ATAD1|84896|ATPase family, AAA domain containing 1##NM_032810|ATAD1|84896|ATPase family, AAA domain containing 1##BC005821|PTEN|5728|phosphatase and tensin homolog##U96180|PTEN|5728|phosphatase and tensin homolog##BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase	0.0	
chr1	160398750	160398930	reg1002829.p2	4.197	+	NM_020335 TSC_hg19_v1_chr1_+_160370394	-28461	+	M96739 AK313700 NM_005598 BC013789	-61976	+	NM_001098398 NM_004371 U24105	-85437	-	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	94189	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	150407	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	150448	-	NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##NM_001098398|COPA|1314|coatomer protein complex, subunit alpha##NM_004371|COPA|1314|coatomer protein complex, subunit alpha##U24105|COPA|1314|coatomer protein complex, subunit alpha##AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule	0.0	
chr12	120548574	120548676	reg1028875.p2	4.197	+	TSC_hg19_v1_chr12_+_120427616 AK129960 NM_207311 U88834	-121027	+	TSC_hg19_v1_chr12_-_120315112 AY209000 AY257469 BC008127 AY681966 NM_001206999 NM_007174	-233532	-	AK123136 TSC_hg19_v1_chr12_-_120241305	-307328	-	AF498960 BT020024 CR536486 CR541683 CU677517 DQ890586 DQ890603 DQ893750 AB528529 TSC_hg19_v1_chr12_-_120554547 X79781 AK304620	5876	-	TSC_hg19_v1_chr12_-_120554551 AK312538	5928	-	BC015931 TSC_hg19_v1_chr12_-_120554557	5932	-	AK129960|CCDC64|92558|coiled-coil domain containing 64##NM_207311|CCDC64|92558|coiled-coil domain containing 64##U88834|CCDC64|92558|coiled-coil domain containing 64##AY209000|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY257469|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##BC008127|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY681966|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_001206999|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_007174|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AK123136|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AF498960|RAB35|11021|RAB35, member RAS oncogene family##BT020024|RAB35|11021|RAB35, member RAS oncogene family##CR536486|RAB35|11021|RAB35, member RAS oncogene family##CR541683|RAB35|11021|RAB35, member RAS oncogene family##DQ890586|RAB35|11021|RAB35, member RAS oncogene family##DQ890603|RAB35|11021|RAB35, member RAS oncogene family##DQ893750|RAB35|11021|RAB35, member RAS oncogene family##X79781|RAB35|11021|RAB35, member RAS oncogene family##AK304620|RAB35|11021|RAB35, member RAS oncogene family##AK312538|RAB35|11021|RAB35, member RAS oncogene family##BC015931|RAB35|11021|RAB35, member RAS oncogene family	0.0	
chr14	83338957	83339073	reg1036178.p1	4.197	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-1338788	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-1338867	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-1474189	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	2657458	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	2657526	+	TSC_hg19_v1_chr14_+_85999692 AK297248	2660570	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.090594	
chr16	67427307	67427471	reg1036600.p1	4.197	+	TSC_hg19_v1_chr16_-_67427402 AF132972 AF078846 BC000691 NM_015964 NM_016140	-10	-	AK311487 NM_001161575 AK297329 AK309897 AK001866 AK292311 AY313780 AK301766	-46111	+	TSC_hg19_v1_chr16_+_67360728 AY963267 BC026156 NM_018296 BC018031	-66637	+	TSC_hg19_v1_chr16_-_67450360 NM_013304 U90653 BC021908	22908	-	TSC_hg19_v1_chr16_+_67465023 U26726 BC036780 BC064536 NM_000196 U14631	37641	+	CU679153 DQ893270 DQ896601 X71490 TSC_hg19_v1_chr16_-_67515051 AK300570 AK313035 AK125522 BC008861 NM_004691	87655	-	AF132972|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AF078846|TPPP3|51673|tubulin polymerization-promoting protein family member 3##BC000691|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_015964|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_016140|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AK311487|LRRC36|55282|leucine rich repeat containing 36##NM_001161575|LRRC36|55282|leucine rich repeat containing 36##AK297329|LRRC36|55282|leucine rich repeat containing 36##AK309897|LRRC36|55282|leucine rich repeat containing 36##AK001866|LRRC36|55282|leucine rich repeat containing 36##AK292311|LRRC36|55282|leucine rich repeat containing 36##AY313780|LRRC36|55282|leucine rich repeat containing 36##AK301766|LRRC36|55282|leucine rich repeat containing 36##AY963267|LRRC36|55282|leucine rich repeat containing 36##BC026156|LRRC36|55282|leucine rich repeat containing 36##NM_018296|LRRC36|55282|leucine rich repeat containing 36##BC018031|LRRC36|55282|leucine rich repeat containing 36##NM_013304|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U90653|ZDHHC1|29800|zinc finger, DHHC-type containing 1##BC021908|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U26726|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC036780|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##BC064536|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##NM_000196|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##U14631|HSD11B2|3291|hydroxysteroid (11-beta) dehydrogenase 2##DQ893270|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##DQ896601|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##X71490|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK300570|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK313035|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##AK125522|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##BC008861|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1##NM_004691|ATP6V0D1|9114|ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1	0.017986	
chr17	61774012	61774120	reg1031664.p1	4.197	+	TSC_hg19_v1_chr17_+_61699786 BC090859 NM_002401 NM_203351 AL834303	-74268	+	TSC_hg19_v1_chr17_+_61699785 AK225784	-74282	+	TSC_hg19_v1_chr17_+_61699772 AX775739 AX775741 AK315305	-74320	+	BC025738 TSC_hg19_v1_chr17_-_61777476	3405	-	TSC_hg19_v1_chr17_-_61777486 AK092301 AX747464 BC004400 NM_030576 AY037154	3452	-	BC043641 TSC_hg19_v1_chr17_-_61819160 AL832407 AK301331 AK075005	45075	-	BC090859|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##NM_002401|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##NM_203351|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AL834303|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AK225784|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AX775739|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AX775741|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##AK315305|MAP3K3|4215|mitogen-activated protein kinase kinase kinase 3##BC025738|LIMD2|80774|LIM domain containing 2##AK092301|LIMD2|80774|LIM domain containing 2##BC004400|LIMD2|80774|LIM domain containing 2##NM_030576|LIMD2|80774|LIM domain containing 2##AY037154|LIMD2|80774|LIM domain containing 2##BC043641|STRADA|92335|STE20-related kinase adaptor alpha##AL832407|STRADA|92335|STE20-related kinase adaptor alpha##AK301331|STRADA|92335|STE20-related kinase adaptor alpha##AK075005|STRADA|92335|STE20-related kinase adaptor alpha	0.995005	CTCF.p2:9:0.995
chr2	106438809	106438933	reg1032032.p1	4.197	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	-5896	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	-77328	+	NM_201557	-383642	-	NM_001004720 BC000103	29390	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	243293	+	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	371874	-	AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##NM_201557|FHL2|2274|four and a half LIM domains 2##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1	0.0	
chr3	63218601	63218713	reg1027968.p2	4.197	+	AF458662 AB593079 TSC_hg19_v1_chr3_-_62861056 AB032947 NM_003716 NM_183393 NM_183394	-357613	-	TSC_hg19_v1_chr3_-_62860565 AB587314	-358025	-	AK290464 NM_018008	-859468	-	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	45260	+	NM_144642 AK315958 AK312465	210142	+	NM_001080537 AK126350	419701	+	AF458662|CADPS|8618|Ca++-dependent secretion activator##AB593079|CADPS|8618|Ca++-dependent secretion activator##AB032947|CADPS|8618|Ca++-dependent secretion activator##NM_003716|CADPS|8618|Ca++-dependent secretion activator##NM_183393|CADPS|8618|Ca++-dependent secretion activator##NM_183394|CADPS|8618|Ca++-dependent secretion activator##AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2##NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin##NM_144642|SYNPR|132204|synaptoporin##AK315958|SYNPR|132204|synaptoporin##AK312465|SYNPR|132204|synaptoporin##NM_001080537|SNTN|132203|sentan, cilia apical structure protein##AK126350|SNTN|132203|sentan, cilia apical structure protein	0.996011	CTCF.p2:0:0.996
chr6	28548379	28548473	reg1026703.p2	4.197	+	AJ005277 BC128159 BC128160 NM_001509 NM_003996 AB463692	-54638	+	BC133691 BC148315 AY324826 NM_182701	-64860	-	AK309235 AL833347 AK092117 AX747363 NM_001012455	-137173	-	AK056369 BX647791 AY517631 NM_052923	6662	-	CU680626 CU688196 DQ890982 DQ894156 AB528391 TSC_hg19_v1_chr6_-_28891498	343043	-	AF230393 AF230394 J03407 TSC_hg19_v1_chr6_-_28891717 AB209885 BC013580 AJ420519	343254	-	AJ005277|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC128159|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC128160|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##NM_001509|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##NM_003996|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC133691|GPX6|257202|glutathione peroxidase 6 (olfactory)##BC148315|GPX6|257202|glutathione peroxidase 6 (olfactory)##AY324826|GPX6|257202|glutathione peroxidase 6 (olfactory)##NM_182701|GPX6|257202|glutathione peroxidase 6 (olfactory)##AK309235|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AL833347|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AK092117|ZSCAN23|222696|zinc finger and SCAN domain containing 23##NM_001012455|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AK056369|SCAND3|114821|SCAN domain containing 3##BX647791|SCAND3|114821|SCAN domain containing 3##AY517631|SCAND3|114821|SCAN domain containing 3##NM_052923|SCAND3|114821|SCAN domain containing 3##DQ890982|TRIM27|5987|tripartite motif containing 27##DQ894156|TRIM27|5987|tripartite motif containing 27##AF230393|TRIM27|5987|tripartite motif containing 27##AF230394|TRIM27|5987|tripartite motif containing 27##J03407|TRIM27|5987|tripartite motif containing 27##AB209885|TRIM27|5987|tripartite motif containing 27##BC013580|TRIM27|5987|tripartite motif containing 27##AJ420519|TRIM27|5987|tripartite motif containing 27	0.30106	CTCF.p2:17:0.301
chr8	123459803	123459907	reg1025137.p1	4.197	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-806229	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1635349	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1635585	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	334056	+	BC042145 TSC_hg19_v1_chr8_+_123794000	334139	+	TSC_hg19_v1_chr8_+_123794108 AB020661	334248	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.111273	
chr9	131965139	131965318	reg1029327.p1	4.197	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-24688	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-24721	-	AK310328 TSC_hg19_v1_chr9_+_131902359	-62918	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	118067	+	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	286126	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	286213	+	NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##AK310328|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190	0.0	
chr1	219638657	219638838	reg1032104.p1	4.196	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-291505	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-291589	+	M19154 TSC_hg19_v1_chr1_+_218519634	-1119142	+	BC036078 TSC_hg19_v1_chr1_-_220101540	462782	-	AB464233 TSC_hg19_v1_chr1_-_220101784	463044	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	463218	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.0	
chr1	234793138	234793319	reg1036066.p2	4.196	+	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-47982	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-49370	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-49397	-	TSC_hg19_v1_chr1_-_234895746 AF193050	102546	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	498861	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	499003	-	BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.016121	
chr12	6571211	6571348	reg1032477.p2	4.196	+	NM_018009 TSC_hg19_v1_chr12_+_6561272 BC015017 AK223163 AK001005 AK002056 AK222956 AK098035 HQ258015	-9985	+	AK315732 NM_001242 BC012160 M63928 DQ892296 EU176659 AB590221 CU680244	-17133	+	TSC_hg19_v1_chr12_+_6493333 AK095418 BC026262 AK027080 L04270 NM_002342 AB527559 DQ891995 DQ895185 CU693188	-77907	+	TSC_hg19_v1_chr12_-_6579844 AF060538 BC023286 AK289498 AK296294 AK303137 AK309184 NM_014231 NM_016830 NM_199245	8535	-	BC000191 TSC_hg19_v1_chr12_-_6602417 BC014329 AB049959 AF151075 AF212248 NM_016497	31165	-	TSC_hg19_v1_chr12_+_6602542 D63880 BC016913	31270	+	NM_018009|TAPBPL|55080|TAP binding protein-like##BC015017|TAPBPL|55080|TAP binding protein-like##AK223163|TAPBPL|55080|TAP binding protein-like##AK001005|TAPBPL|55080|TAP binding protein-like##AK002056|TAPBPL|55080|TAP binding protein-like##AK222956|TAPBPL|55080|TAP binding protein-like##AK098035|TAPBPL|55080|TAP binding protein-like##HQ258015|TAPBPL|55080|TAP binding protein-like##AK315732|CD27|939|CD27 molecule##NM_001242|CD27|939|CD27 molecule##BC012160|CD27|939|CD27 molecule##M63928|CD27|939|CD27 molecule##DQ892296|CD27|939|CD27 molecule##EU176659|CD27|939|CD27 molecule##AK095418|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##BC026262|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK027080|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##L04270|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##NM_002342|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ891995|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ895185|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AF060538|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC023286|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK289498|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK296294|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK303137|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK309184|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_014231|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_016830|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_199245|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC000191|MRPL51|51258|mitochondrial ribosomal protein L51##BC014329|MRPL51|51258|mitochondrial ribosomal protein L51##AB049959|MRPL51|51258|mitochondrial ribosomal protein L51##AF151075|MRPL51|51258|mitochondrial ribosomal protein L51##AF212248|MRPL51|51258|mitochondrial ribosomal protein L51##NM_016497|MRPL51|51258|mitochondrial ribosomal protein L51##D63880|NCAPD2|9918|non-SMC condensin I complex, subunit D2##BC016913|NCAPD2|9918|non-SMC condensin I complex, subunit D2	0.013542	
chr14	31376103	31376194	reg1034404.p2	4.196	+	TSC_hg19_v1_chr14_+_31343764 NM_001135058 NM_004086 AY358900 AF006740 AK292724 BC000640 BC007230 BC018827	-32430	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	-284604	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	-284624	+	NM_001128126 NM_007077	118534	+	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	119422	-	TSC_hg19_v1_chr14_-_31676690 NM_015382	300537	-	NM_001135058|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_004086|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AY358900|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AF006740|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AK292724|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC000640|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC007230|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC018827|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##NM_001128126|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##NM_007077|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3##NM_015382|HECTD1|25831|HECT domain containing 1	0.991632	CTCF.p2:4:0.992
chr15	70929270	70929377	reg1030782.p2	4.196	+	TSC_hg19_v1_chr15_-_70878946 BC040579	-50379	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-539080	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-539096	-	BC016881 AL834243 NM_001008224 AK055435	65304	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	126519	-	CU675231 BC006082 BC009446 BC014018 AL833876 BC039153 TSC_hg19_v1_chr15_-_71146496 AK130092 AF443828 AF443829 AK002058 NM_018357 NM_197958	217145	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC006082|LARP6|55323|La ribonucleoprotein domain family, member 6##BC009446|LARP6|55323|La ribonucleoprotein domain family, member 6##BC014018|LARP6|55323|La ribonucleoprotein domain family, member 6##AL833876|LARP6|55323|La ribonucleoprotein domain family, member 6##BC039153|LARP6|55323|La ribonucleoprotein domain family, member 6##AK130092|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443828|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443829|LARP6|55323|La ribonucleoprotein domain family, member 6##AK002058|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_018357|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_197958|LARP6|55323|La ribonucleoprotein domain family, member 6	0.269876	CTCF.p2:-8:0.270
chr15	89714830	89714956	reg1030540.p2	4.196	+	TSC_hg19_v1_chr15_+_89631738 X12433	-83156	+	TSC_hg19_v1_chr15_+_89631708 AL110291 AK222841 AK290340 AK223083 AK296827	-83190	+	TSC_hg19_v1_chr15_+_89631652 BC090052 AF546700 BC019248	-83245	+	AL109729 TSC_hg19_v1_chr15_+_89739320	24385	+	AK312457 BC004199 NM_000326 DQ980611	50013	-	TSC_hg19_v1_chr15_+_89787197 NM_001113378 NM_018193 BC146804	72300	+	X12433|ABHD2|11057|abhydrolase domain containing 2##AL110291|ABHD2|11057|abhydrolase domain containing 2##AK222841|ABHD2|11057|abhydrolase domain containing 2##AK290340|ABHD2|11057|abhydrolase domain containing 2##AK223083|ABHD2|11057|abhydrolase domain containing 2##AK296827|ABHD2|11057|abhydrolase domain containing 2##BC090052|ABHD2|11057|abhydrolase domain containing 2##AF546700|ABHD2|11057|abhydrolase domain containing 2##BC019248|ABHD2|11057|abhydrolase domain containing 2##AL109729|ABHD2|11057|abhydrolase domain containing 2##AK312457|RLBP1|6017|retinaldehyde binding protein 1##BC004199|RLBP1|6017|retinaldehyde binding protein 1##NM_000326|RLBP1|6017|retinaldehyde binding protein 1##DQ980611|RLBP1|6017|retinaldehyde binding protein 1##NM_001113378|FANCI|55215|Fanconi anemia, complementation group I##NM_018193|FANCI|55215|Fanconi anemia, complementation group I##BC146804|FANCI|55215|Fanconi anemia, complementation group I	0.112331	
chr15	91201190	91201322	reg1034504.p2	4.196	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-128060	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-269717	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-269750	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	59358	+	NM_002569 X17094	210628	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	226445	+	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene	0.0	
chr16	32077693	32077795	reg1033269.p2	4.196	+	TSC_hg19_v1_chr16_+_31885159 BC036367 BC127088 BC127089 AK292573	-192540	+	AF220492 TSC_hg19_v1_chr16_+_31885131	-192612	+	TSC_hg19_v1_chr16_+_31885114 AK096390	-192628	+	TSC_hg19_v1_chr16_-_32199418 AK300387	121675	-	AB023508 AB023509 BC096700 BC099842 NM_001243722 AK312220 CR541650	186914	+	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	609689	-	BC036367|ZNF267|10308|zinc finger protein 267##BC127088|ZNF267|10308|zinc finger protein 267##BC127089|ZNF267|10308|zinc finger protein 267##AK292573|ZNF267|10308|zinc finger protein 267##AF220492|ZNF267|10308|zinc finger protein 267##AK096390|ZNF267|10308|zinc finger protein 267##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AB023508|TP53TG3|24150|TP53 target 3##AB023509|TP53TG3|24150|TP53 target 3##BC096700|TP53TG3|24150|TP53 target 3##BC099842|TP53TG3|24150|TP53 target 3##NM_001243722|LOC729264|729264|TP53-target gene 3 protein-like##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3	0.329081	CTCF.p2:4:0.329
chr17	27065860	27066010	reg1039010.p2	4.196	+	BC112240 BC113705 AK301429 AY242354 AY267371 HQ258347 NM_178170	-10121	+	NM_001160407	-11987	-	EU831756 EU831834 TSC_hg19_v1_chr17_-_27053250 BC014072 NM_138463	-12747	-	TSC_hg19_v1_chr17_+_27071025 NM_004295 BC001769 X80200 AK300804 AY937222 AY937223 AY937224 AY937225 AB529167 DQ892825 DQ896071 CU674876 AF082185	5134	+	TSC_hg19_v1_chr17_-_27139467 AK095569	73512	-	BC021228 TSC_hg19_v1_chr17_-_27169811 BX647766 AK299477 AK001562 AK057665 NM_001077498 NM_018182	103855	-	BC112240|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##BC113705|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AK301429|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY242354|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY267371|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##HQ258347|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_178170|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_001160407|TLCD1|116238|TLC domain containing 1##EU831756|TLCD1|116238|TLC domain containing 1##EU831834|TLCD1|116238|TLC domain containing 1##BC014072|TLCD1|116238|TLC domain containing 1##NM_138463|TLCD1|116238|TLC domain containing 1##NM_004295|TRAF4|9618|TNF receptor-associated factor 4##BC001769|TRAF4|9618|TNF receptor-associated factor 4##X80200|TRAF4|9618|TNF receptor-associated factor 4##AK300804|TRAF4|9618|TNF receptor-associated factor 4##AY937222|TRAF4|9618|TNF receptor-associated factor 4##AY937223|TRAF4|9618|TNF receptor-associated factor 4##AY937224|TRAF4|9618|TNF receptor-associated factor 4##DQ892825|TRAF4|9618|TNF receptor-associated factor 4##DQ896071|TRAF4|9618|TNF receptor-associated factor 4##AF082185|TRAF4|9618|TNF receptor-associated factor 4##AK095569|C17orf63|55731|chromosome 17 open reading frame 63##BC021228|C17orf63|55731|chromosome 17 open reading frame 63##BX647766|C17orf63|55731|chromosome 17 open reading frame 63##AK299477|C17orf63|55731|chromosome 17 open reading frame 63##AK001562|C17orf63|55731|chromosome 17 open reading frame 63##AK057665|C17orf63|55731|chromosome 17 open reading frame 63##NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63##NM_018182|C17orf63|55731|chromosome 17 open reading frame 63	0.016775	
chr2	238877388	238877513	reg1016800.p2	4.196	+	TSC_hg19_v1_chr2_+_238875689 BC010549 AK294107	-1747	+	TSC_hg19_v1_chr2_+_238875673 AK290063	-1770	+	NM_080678 TSC_hg19_v1_chr2_+_238875655 AK002119 AK293334 AK297502 AK303094	-1826	+	AB209458 NM_016510 TSC_hg19_v1_chr2_+_238969639	92151	+	TSC_hg19_v1_chr2_+_238969669 AK301009 BC007891 AF175767 AK298409 DQ893234 DQ896564 CU675851	92230	+	TSC_hg19_v1_chr2_+_238969747 BC000586 AK293283	92317	+	BC010549|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK294107|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK290063|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##NM_080678|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK293334|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK297502|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK303094|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AB209458|SCLY|51540|selenocysteine lyase##NM_016510|SCLY|51540|selenocysteine lyase##AK301009|SCLY|51540|selenocysteine lyase##BC007891|SCLY|51540|selenocysteine lyase##AF175767|SCLY|51540|selenocysteine lyase##AK298409|SCLY|51540|selenocysteine lyase##DQ893234|SCLY|51540|selenocysteine lyase##DQ896564|SCLY|51540|selenocysteine lyase##BC000586|SCLY|51540|selenocysteine lyase##AK293283|SCLY|51540|selenocysteine lyase	0.0	
chr4	102728219	102728315	reg1028566.p2	4.196	+	TSC_hg19_v1_chr4_+_102711886 BC032241 AK292133 AL834291 EU051376 AB587395	-16332	+	NM_001127507 NM_017935 TSC_hg19_v1_chr4_+_102711808	-16471	+	BC098424 EU192652 NM_000944 NM_001130691 NM_001130692 TSC_hg19_v1_chr4_-_102268635 EU192653	-459637	-	NM_001083907 TSC_hg19_v1_chr4_+_102734998 AK000713	6741	+	AK027652 NM_001135148	517201	-	CU680230 DQ892212 DQ895407 TSC_hg19_v1_chr4_-_103265863	537601	-	BC032241|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK292133|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AL834291|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##EU051376|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_001127507|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_017935|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##BC098424|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##EU192652|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_000944|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001130691|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001130692|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##EU192653|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK027652|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##NM_001135148|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##DQ892212|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8##DQ895407|SLC39A8|64116|solute carrier family 39 (zinc transporter), member 8	0.0	
chr4	25047366	25047539	reg1029810.p1	4.196	+	AB067503 AF467955 AJ487516 AJ487958 BC101759 BC101761 NM_018176 TSC_hg19_v1_chr4_-_25032569	-15015	-	AK302905 AL834257 NM_173463	-65655	-	AK125353 BC057761 BC067735 NM_001130726 TSC_hg19_v1_chr4_-_24914655	-132871	-	AF146396 AJ277541 BC117202 BC126213 TSC_hg19_v1_chr4_-_25162072 AJ238617 EU832146 EU832239 BC023539 BX648976 BC012188 AK292476 NM_016955	114603	-	AK296302 AK095450 TSC_hg19_v1_chr4_+_25162325	114853	+	TSC_hg19_v1_chr4_+_25235654 BC051749 NM_018323 AK128622 AK001967 AY091514 AY065990 AF411320	188266	+	AB067503|LGI2|55203|leucine-rich repeat LGI family, member 2##AF467955|LGI2|55203|leucine-rich repeat LGI family, member 2##AJ487516|LGI2|55203|leucine-rich repeat LGI family, member 2##AJ487958|LGI2|55203|leucine-rich repeat LGI family, member 2##BC101759|LGI2|55203|leucine-rich repeat LGI family, member 2##BC101761|LGI2|55203|leucine-rich repeat LGI family, member 2##NM_018176|LGI2|55203|leucine-rich repeat LGI family, member 2##AK302905|CCDC149|91050|coiled-coil domain containing 149##AL834257|CCDC149|91050|coiled-coil domain containing 149##NM_173463|CCDC149|91050|coiled-coil domain containing 149##AK125353|CCDC149|91050|coiled-coil domain containing 149##BC057761|CCDC149|91050|coiled-coil domain containing 149##BC067735|CCDC149|91050|coiled-coil domain containing 149##NM_001130726|CCDC149|91050|coiled-coil domain containing 149##AF146396|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ277541|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC117202|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC126213|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ238617|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832146|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832239|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC023539|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BX648976|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC012188|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AK292476|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##NM_016955|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AK296302|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK095450|LOC285540|285540|uncharacterized LOC285540##BC051749|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##NM_018323|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK128622|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK001967|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AY091514|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AY065990|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AF411320|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta	0.0	
chr5	138773126	138773302	reg1032694.p2	4.196	+	BC040037 BC050563 NM_194296 AK098740	-33449	-	NM_001161546	-42330	-	GQ477350 DQ892627 EU176703 AK057549 AK292706 BC009931 BC021275 AF151024 NM_016459	-47640	-	BC030162 TSC_hg19_v1_chr5_-_138775145 AK024054	1937	-	AK308138 TSC_hg19_v1_chr5_-_138775199	1980	-	NM_152686 TSC_hg19_v1_chr5_-_138775215	2001	-	BC040037|SPATA24|202051|spermatogenesis associated 24##BC050563|SPATA24|202051|spermatogenesis associated 24##NM_194296|SPATA24|202051|spermatogenesis associated 24##AK098740|SPATA24|202051|spermatogenesis associated 24##NM_001161546|C5orf65|389333|chromosome 5 open reading frame 65##GQ477350|MZB1|51237|marginal zone B and B1 cell-specific protein##DQ892627|MZB1|51237|marginal zone B and B1 cell-specific protein##EU176703|MZB1|51237|marginal zone B and B1 cell-specific protein##AK057549|MZB1|51237|marginal zone B and B1 cell-specific protein##AK292706|MZB1|51237|marginal zone B and B1 cell-specific protein##BC009931|MZB1|51237|marginal zone B and B1 cell-specific protein##BC021275|MZB1|51237|marginal zone B and B1 cell-specific protein##AF151024|MZB1|51237|marginal zone B and B1 cell-specific protein##NM_016459|MZB1|51237|marginal zone B and B1 cell-specific protein##BC030162|DNAJC18|202052|DnaJ (Hsp40) homolog, subfamily C, member 18##AK308138|DNAJC18|202052|DnaJ (Hsp40) homolog, subfamily C, member 18##NM_152686|DNAJC18|202052|DnaJ (Hsp40) homolog, subfamily C, member 18	0.0	
chr6	73398931	73399050	reg1031214.p1	4.196	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	-66929	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	-67101	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	-67420	+	BC004267 NM_001126063	536184	-	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	573876	-	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	573983	+	AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC004267|KHDC1L|100129128|KH homology domain containing 1-like##NM_001126063|KHDC1L|100129128|KH homology domain containing 1-like##BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1	0.045451	
chr11	73372323	73372395	reg1000319.p3	4.195	+	AK290109 NM_001130036	-12625	+	NM_001130034 NM_001130035 BC008075 AB209716 AK289620 TSC_hg19_v1_chr11_+_73358695 AK296033 AK301299 AF093249 AF100612 AK289909 AK311158	-13696	+	AF101054 NM_001130033 NM_021200 U89715	-15137	+	AK301534 NM_001243719	98777	-	BC034996 TSC_hg19_v1_chr11_-_73472120 BC003617 AK309311 AK223551 AK289748 BC096818 AK057157 BC068486 NM_001243718 NM_002869 NM_198896	99788	-	AF161408 TSC_hg19_v1_chr11_+_73498935 AK297746 NM_016055 BC009764 AK309219 AK310005	126567	+	AK290109|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130036|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130034|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130035|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##BC008075|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AB209716|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289620|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK296033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK301299|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF093249|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF100612|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289909|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK311158|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF101054|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_021200|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##U89715|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK301534|RAB6A|5870|RAB6A, member RAS oncogene family##NM_001243719|RAB6A|5870|RAB6A, member RAS oncogene family##BC034996|RAB6A|5870|RAB6A, member RAS oncogene family##BC003617|RAB6A|5870|RAB6A, member RAS oncogene family##AK309311|RAB6A|5870|RAB6A, member RAS oncogene family##AK223551|RAB6A|5870|RAB6A, member RAS oncogene family##AK289748|RAB6A|5870|RAB6A, member RAS oncogene family##BC096818|RAB6A|5870|RAB6A, member RAS oncogene family##AK057157|RAB6A|5870|RAB6A, member RAS oncogene family##BC068486|RAB6A|5870|RAB6A, member RAS oncogene family##NM_001243718|RAB6A|5870|RAB6A, member RAS oncogene family##NM_002869|RAB6A|5870|RAB6A, member RAS oncogene family##NM_198896|RAB6A|5870|RAB6A, member RAS oncogene family##AF161408|MRPL48|51642|mitochondrial ribosomal protein L48##AK297746|MRPL48|51642|mitochondrial ribosomal protein L48##NM_016055|MRPL48|51642|mitochondrial ribosomal protein L48##BC009764|MRPL48|51642|mitochondrial ribosomal protein L48##AK309219|MRPL48|51642|mitochondrial ribosomal protein L48##AK310005|MRPL48|51642|mitochondrial ribosomal protein L48	0.0	
chr12	14391425	14391585	reg1012660.p2	4.195	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-258519	-	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-1041776	+	TSC_hg19_v1_chr12_+_13349719 AK299388 BC017854	-1041788	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	127130	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	146767	+	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	329104	-	BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK299388|EMP1|2012|epithelial membrane protein 1##BC017854|EMP1|2012|epithelial membrane protein 1##AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1	0.0	
chr12	3244913	3245093	reg1003812.p2	4.195	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-58441	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-175942	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-176409	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	355438	+	AK125333 TSC_hg19_v1_chr12_-_3601984	356982	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	617265	-	NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B	0.0	
chr2	28475271	28475406	reg1031490.p1	4.195	+	BC014088 TSC_hg19_v1_chr2_-_28113982	-361369	-	TSC_hg19_v1_chr2_+_28113675 L38616 AF420602 AF420603 AF420604 AF420605	-361670	+	TSC_hg19_v1_chr2_+_28113621 AF015767	-361706	+	BX647822 TSC_hg19_v1_chr2_+_28615691	140342	+	TSC_hg19_v1_chr2_+_28615724 AK055579	140372	+	TSC_hg19_v1_chr2_+_28615779 NM_005253	140444	+	BC014088|LOC100302650|100302650|uncharacterized LOC100302650##L38616|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF420602|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF420603|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF420604|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF420605|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF015767|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##BX647822|FOSL2|2355|FOS-like antigen 2##AK055579|FOSL2|2355|FOS-like antigen 2##NM_005253|FOSL2|2355|FOS-like antigen 2	0.0	
chr3	124937573	124937675	reg1037799.p1	4.195	+	AK123001 TSC_hg19_v1_chr3_-_124931591 AX721165 AK131070 NM_024628	-6039	-	AF345197 HQ258349 BC126158 BC126160 AF390442 NM_001195483	-7407	-	BC063528 TSC_hg19_v1_chr3_-_124842461	-95169	-	AF039019 AL833616 AF432210 AJ236885 L04282 BC035591 BC018971 AK314203 TSC_hg19_v1_chr3_-_125094153 BC050260 NM_021964	156476	-	AF065485 TSC_hg19_v1_chr3_-_125239047 CU676320 DQ892131 DQ895325 AB528425 AK001835 AK298972 BC018762 BC021002	301407	-	TSC_hg19_v1_chr3_-_125239050 NM_003794	301429	-	AK123001|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_024628|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF039019|ZNF148|7707|zinc finger protein 148##AL833616|ZNF148|7707|zinc finger protein 148##AF432210|ZNF148|7707|zinc finger protein 148##AJ236885|ZNF148|7707|zinc finger protein 148##L04282|ZNF148|7707|zinc finger protein 148##BC035591|ZNF148|7707|zinc finger protein 148##BC018971|ZNF148|7707|zinc finger protein 148##AK314203|ZNF148|7707|zinc finger protein 148##BC050260|ZNF148|7707|zinc finger protein 148##NM_021964|ZNF148|7707|zinc finger protein 148##AF065485|SNX4|8723|sorting nexin 4##DQ892131|SNX4|8723|sorting nexin 4##DQ895325|SNX4|8723|sorting nexin 4##AK001835|SNX4|8723|sorting nexin 4##AK298972|SNX4|8723|sorting nexin 4##BC018762|SNX4|8723|sorting nexin 4##NM_003794|SNX4|8723|sorting nexin 4	0.0	
chr6	11323947	11324084	reg1032946.p1	4.195	+	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-91105	-	L43821 TSC_hg19_v1_chr6_-_11232900	-91115	-	U64317 BC020686 TSC_hg19_v1_chr6_-_11232894 BC050740 BC040207	-91124	-	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	58525	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	214483	+	NM_001143948 NM_032744	455264	-	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105	0.017647	
chr6	33679329	33679425	reg1017938.p1	4.195	+	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	-90183	+	TSC_hg19_v1_chr6_-_33548037 AK303422 AK293547 NM_001188	-131334	-	U23765 U16811 TSC_hg19_v1_chr6_-_33547998 X84213 BC004431 BC032789 BC110337 AK091807 AK292093	-131462	-	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	86	-	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	136	-	AK056586 AK223572 AK289935 BC089389 NM_001142883 NM_054111	35344	-	D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##AK303422|BAK1|578|BCL2-antagonist/killer 1##AK293547|BAK1|578|BCL2-antagonist/killer 1##NM_001188|BAK1|578|BCL2-antagonist/killer 1##U23765|BAK1|578|BCL2-antagonist/killer 1##U16811|BAK1|578|BCL2-antagonist/killer 1##X84213|BAK1|578|BCL2-antagonist/killer 1##BC004431|BAK1|578|BCL2-antagonist/killer 1##BC032789|BAK1|578|BCL2-antagonist/killer 1##BC110337|BAK1|578|BCL2-antagonist/killer 1##AK091807|BAK1|578|BCL2-antagonist/killer 1##AK292093|BAK1|578|BCL2-antagonist/killer 1##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125##AK056586|IP6K3|117283|inositol hexakisphosphate kinase 3##AK223572|IP6K3|117283|inositol hexakisphosphate kinase 3##AK289935|IP6K3|117283|inositol hexakisphosphate kinase 3##BC089389|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_001142883|IP6K3|117283|inositol hexakisphosphate kinase 3##NM_054111|IP6K3|117283|inositol hexakisphosphate kinase 3	0.0	
chr7	112754112	112754212	reg1030839.p1	4.195	+	NM_001146265 NM_018970 TSC_hg19_v1_chr7_-_112727844	-26322	-	TSC_hg19_v1_chr7_-_112727812 AK309392 AF250237 AK302769	-26355	-	BC030577 TSC_hg19_v1_chr7_-_112727780	-26382	-	TSC_hg19_v1_chr7_-_112758606 BC065765 BX537645	4444	-	TSC_hg19_v1_chr7_-_112758613 BC107860	4467	-	X78578 AF024579 HQ258594 BC070313 BC056666 NM_002711 BC126451 BC126453	804921	-	NM_001146265|GPR85|54329|G protein-coupled receptor 85##NM_018970|GPR85|54329|G protein-coupled receptor 85##AK309392|GPR85|54329|G protein-coupled receptor 85##AF250237|GPR85|54329|G protein-coupled receptor 85##AK302769|GPR85|54329|G protein-coupled receptor 85##BC030577|GPR85|54329|G protein-coupled receptor 85##BC065765|LOC401397|401397|uncharacterized LOC401397##BX537645|LOC401397|401397|uncharacterized LOC401397##BC107860|LOC401397|401397|uncharacterized LOC401397##X78578|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AF024579|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##HQ258594|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC070313|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC056666|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##NM_002711|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126451|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126453|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A	0.959953	CTCF.p2:19:0.960
chr11	93517242	93517397	reg1036724.p1	4.194	+	TSC_hg19_v1_chr11_+_93474852 BC012298 NM_014039 AK225977 AL136605 AK292215 BC007110 AK291833 AF092133	-42519	+	AF275800 TSC_hg19_v1_chr11_-_93474661 BC001972 AF086435 AK027016 NM_024116	-42713	-	AB051518 TSC_hg19_v1_chr11_+_93394877	-122430	+	TSC_hg19_v1_chr11_+_93517447 NM_004268 AK001674 AK022156 AK299702	104	+	TSC_hg19_v1_chr11_+_93517458 BC021101	140	+	AF105421 TSC_hg19_v1_chr11_+_93517475	154	+	BC012298|C11orf54|28970|chromosome 11 open reading frame 54##NM_014039|C11orf54|28970|chromosome 11 open reading frame 54##AK225977|C11orf54|28970|chromosome 11 open reading frame 54##AL136605|C11orf54|28970|chromosome 11 open reading frame 54##AK292215|C11orf54|28970|chromosome 11 open reading frame 54##BC007110|C11orf54|28970|chromosome 11 open reading frame 54##AK291833|C11orf54|28970|chromosome 11 open reading frame 54##AF092133|C11orf54|28970|chromosome 11 open reading frame 54##AF275800|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##BC001972|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AF086435|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AK027016|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##NM_024116|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AB051518|KIAA1731|85459|KIAA1731##NM_004268|MED17|9440|mediator complex subunit 17##AK001674|MED17|9440|mediator complex subunit 17##AK022156|MED17|9440|mediator complex subunit 17##AK299702|MED17|9440|mediator complex subunit 17##BC021101|MED17|9440|mediator complex subunit 17##AF105421|MED17|9440|mediator complex subunit 17	0.915303	CTCF.p2:30:0.915
chr1	234406980	234407141	reg1031634.p1	4.194	+	TSC_hg19_v1_chr1_+_234350005 BC037878	-57054	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-366448	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-657141	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	102312	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	207800	-	TSC_hg19_v1_chr1_-_234743489 BC020516	336466	-	BC037878|SLC35F3|148641|solute carrier family 35, member F3##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2	0.023974	
chr14	77030587	77030654	reg1038956.p1	4.194	+	NM_004452	-192931	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-412314	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-412343	+	TSC_hg19_v1_chr14_+_77227817 AK094330	197180	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	197835	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	198432	+	NM_004452|ESRRB|2103|estrogen-related receptor beta##AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1	0.0	
chr16	81782384	81782565	reg1027773.p1	4.194	+	AY172689 NM_030629	-253521	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-303641	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-433824	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	30423	+	TSC_hg19_v1_chr16_+_81812901 AB208914	30428	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	30456	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr2	208634414	208634521	reg1029560.p1	4.194	+	U43318 AB043702 NM_003468	-371	-	TSC_hg19_v1_chr2_+_208576466 BC067253	-57967	+	TSC_hg19_v1_chr2_+_208576365 BC047293	-58072	+	TSC_hg19_v1_chr2_-_208890252 BX648983 NM_001080475	255797	-	HQ258094 U66583 BC117338 BC117340 NM_006891	354729	-	AB590655 U66582 BC074954 BC074955 NM_020989	360013	-	U43318|FZD5|7855|frizzled family receptor 5##AB043702|FZD5|7855|frizzled family receptor 5##NM_003468|FZD5|7855|frizzled family receptor 5##BC067253|CCNYL1|151195|cyclin Y-like 1##BC047293|CCNYL1|151195|cyclin Y-like 1##BX648983|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##NM_001080475|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##HQ258094|CRYGD|1421|crystallin, gamma D##U66583|CRYGD|1421|crystallin, gamma D##BC117338|CRYGD|1421|crystallin, gamma D##BC117340|CRYGD|1421|crystallin, gamma D##NM_006891|CRYGD|1421|crystallin, gamma D##U66582|CRYGC|1420|crystallin, gamma C##BC074954|CRYGC|1420|crystallin, gamma C##BC074955|CRYGC|1420|crystallin, gamma C##NM_020989|CRYGC|1420|crystallin, gamma C	1.005764	CTCF.p2:-6:0.447	CTCF.p2:20:0.559
chr3	42003480	42003661	reg1033557.p1	4.194	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	-11	-	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	-762546	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	-762621	+	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	129263	+	TSC_hg19_v1_chr3_+_42190749 AK294221	187178	+	AL713787 TSC_hg19_v1_chr3_+_42190865	187277	+	BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1	0.0	
chr4	152967012	152967147	reg1031350.p2	4.194	+	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	-284938	-	TSC_hg19_v1_chr4_+_152330327 NM_001109977	-636718	+	BC121109 BC121110 NM_183375	-768755	+	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	306817	-	NM_001013415 AY008274	336585	-	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	489215	-	AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##NM_001109977|FAM160A1|729830|family with sequence similarity 160, member A1##BC121109|PRSS48|345062|protease, serine, 48##BC121110|PRSS48|345062|protease, serine, 48##NM_183375|PRSS48|345062|protease, serine, 48##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7	0.047264	
chr7	99724436	99724544	reg1028486.p1	4.194	+	BC031288 NM_203397	-171	+	AK300005 NM_001190415	-7019	-	AY359100 BC032339 NM_152755 AK075537 BC019903 DQ891593 EU176583	-7177	+	TSC_hg19_v1_chr7_+_99746538 NM_001008395 BC105609 BC063401 BC130553 BC130559	22065	+	TSC_hg19_v1_chr7_-_99756309 BC015722 NM_018275 BC094727 AK310170	31809	-	TSC_hg19_v1_chr7_-_99756347 AK054872	31858	-	BC031288|MBLAC1|255374|metallo-beta-lactamase domain containing 1##NM_203397|MBLAC1|255374|metallo-beta-lactamase domain containing 1##AK300005|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa##NM_001190415|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa##AY359100|CNPY4|245812|canopy 4 homolog (zebrafish)##BC032339|CNPY4|245812|canopy 4 homolog (zebrafish)##NM_152755|CNPY4|245812|canopy 4 homolog (zebrafish)##AK075537|CNPY4|245812|canopy 4 homolog (zebrafish)##BC019903|CNPY4|245812|canopy 4 homolog (zebrafish)##DQ891593|CNPY4|245812|canopy 4 homolog (zebrafish)##EU176583|CNPY4|245812|canopy 4 homolog (zebrafish)##NM_001008395|C7orf59|389541|chromosome 7 open reading frame 59##BC105609|C7orf59|389541|chromosome 7 open reading frame 59##BC063401|C7orf59|389541|chromosome 7 open reading frame 59##BC130553|C7orf59|389541|chromosome 7 open reading frame 59##BC130559|C7orf59|389541|chromosome 7 open reading frame 59##BC015722|C7orf43|55262|chromosome 7 open reading frame 43##NM_018275|C7orf43|55262|chromosome 7 open reading frame 43##BC094727|C7orf43|55262|chromosome 7 open reading frame 43##AK310170|C7orf43|55262|chromosome 7 open reading frame 43##AK054872|C7orf43|55262|chromosome 7 open reading frame 43	0.0	
chr11	851551	851649	reg1032819.p2	4.193	+	NM_001025237	-7155	+	TSC_hg19_v1_chr11_+_844125 BC093031	-7466	+	TSC_hg19_v1_chr11_+_844103 NM_001025234	-7517	+	TSC_hg19_v1_chr11_-_910811 AF212229 AK075413 AK225025 BC095409 AK297743 AK027711	59210	-	AY037151 TSC_hg19_v1_chr11_-_910842 NM_001142674 NM_001142676 NM_001142677 NM_023947	59253	-	NM_001142675	63457	-	NM_001025237|TSPAN4|7106|tetraspanin 4##BC093031|TSPAN4|7106|tetraspanin 4##NM_001025234|TSPAN4|7106|tetraspanin 4##AF212229|CHID1|66005|chitinase domain containing 1##AK075413|CHID1|66005|chitinase domain containing 1##AK225025|CHID1|66005|chitinase domain containing 1##BC095409|CHID1|66005|chitinase domain containing 1##AK297743|CHID1|66005|chitinase domain containing 1##AK027711|CHID1|66005|chitinase domain containing 1##AY037151|CHID1|66005|chitinase domain containing 1##NM_001142674|CHID1|66005|chitinase domain containing 1##NM_001142676|CHID1|66005|chitinase domain containing 1##NM_001142677|CHID1|66005|chitinase domain containing 1##NM_023947|CHID1|66005|chitinase domain containing 1##NM_001142675|CHID1|66005|chitinase domain containing 1	0.758217	CTCF.p2:6:0.758
chr12	46867505	46867685	reg1032370.p1	4.193	+	TSC_hg19_v1_chr12_-_46766619 NM_018976	-100992	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-101306	-	NM_001077484 NM_030674	-204388	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	352161	-	TSC_hg19_v1_chr12_+_47473404 BC072670	605802	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	605988	-	NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2	0.0	
chr2	142898064	142898177	reg1027821.p2	4.193	+	AF176832 NM_018557	-8851	-	TSC_hg19_v1_chr2_-_142888540 AK054663	-9564	-	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-3360314	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	737086	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	737120	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	988810	+	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15	0.54566	CTCF.p2:-8:0.546
chr22	37337031	37337124	reg1031831.p2	4.193	+	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	-27419	+	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	-79969	+	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	-121558	-	BC042635 CR456416 NM_001163857 NM_178552	66780	-	D87292 TSC_hg19_v1_chr22_-_37415489 AK091874 BC010148 AK000862 AK223521 AK301300 NM_003312	78404	-	NM_001013436 NM_001130517 NM_021126 TSC_hg19_v1_chr22_+_37415789	78668	+	BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##BC042635|C22orf33|339669|chromosome 22 open reading frame 33##CR456416|C22orf33|339669|chromosome 22 open reading frame 33##NM_001163857|C22orf33|339669|chromosome 22 open reading frame 33##NM_178552|C22orf33|339669|chromosome 22 open reading frame 33##D87292|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK091874|TST|7263|thiosulfate sulfurtransferase (rhodanese)##BC010148|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK000862|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK223521|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK301300|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_003312|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_001013436|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001130517|MPST|4357|mercaptopyruvate sulfurtransferase##NM_021126|MPST|4357|mercaptopyruvate sulfurtransferase	0.0	
chr3	27763782	27763962	reg1017874.p3	4.193	+	AB031038 BC131712 NM_005442 AB463608 BC037568	-79	-	TSC_hg19_v1_chr3_-_27525893 AK309734	-237942	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	-238047	-	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	329	-	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	519226	+	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	626510	-	AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2	0.115928	
chr5	169830836	169830940	reg1032939.p2	4.193	+	BC025707 NM_004137 AK313979	-14241	-	TSC_hg19_v1_chr5_+_169816493 AK311026	-14392	+	DQ148476 NM_001034838	-50008	+	TSC_hg19_v1_chr5_+_169931023 BC035032 NM_001034837 NM_014592	100147	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	379866	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	458043	+	BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##DQ148476|KCNIP1|30820|Kv channel interacting protein 1##NM_001034838|KCNIP1|30820|Kv channel interacting protein 1##BC035032|KCNIP1|30820|Kv channel interacting protein 1##NM_001034837|KCNIP1|30820|Kv channel interacting protein 1##NM_014592|KCNIP1|30820|Kv channel interacting protein 1##AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17	0.0	
chr1	171952881	171952970	reg1034396.p1	4.192	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-142222	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-202087	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-202111	+	AL035295 NM_139240 BC038410	436903	+	TSC_hg19_v1_chr1_-_172413202 BC006539	460263	-	TSC_hg19_v1_chr1_-_172413207 AK308201	460282	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.996405	CTCF.p2:-5:0.996
chr13	31341524	31341639	reg1029558.p2	4.192	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	-31866	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	-31917	+	AK314143 NM_001204406	-53967	+	NM_032849 AK055635 TSC_hg19_v1_chr13_+_31480407 AL832478 BC040165 BC101624 BC101626 CU691826	138899	+	TSC_hg19_v1_chr13_+_31506809 BC030277 NM_152325 CU688876	165249	+	CU691504 DQ891727 DQ894904 AF039695 TSC_hg19_v1_chr13_-_31735849	394213	-	BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_032849|C13orf33|84935|chromosome 13 open reading frame 33##AK055635|C13orf33|84935|chromosome 13 open reading frame 33##BC040165|C13orf33|84935|chromosome 13 open reading frame 33##BC101624|C13orf33|84935|chromosome 13 open reading frame 33##BC101626|C13orf33|84935|chromosome 13 open reading frame 33##BC030277|C13orf26|122046|chromosome 13 open reading frame 26##NM_152325|C13orf26|122046|chromosome 13 open reading frame 26##DQ891727|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ894904|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AF039695|HSPH1|10808|heat shock 105kDa/110kDa protein 1	0.740561	CTCF.p2:37:0.741
chr20	55043425	55043562	reg1032153.p1	4.192	+	AJ276678 NM_001164116 AX721200 AK308057 NM_001164114 NM_001164115 NM_020356 AK027760 BC027951 AK314653 AK295613	-56186	+	TSC_hg19_v1_chr20_+_54967709 AK293182 AK312774 NM_001033522 BC001011 BC007425	-75776	+	TSC_hg19_v1_chr20_+_54967593 NM_001324 L02547	-75896	+	NM_016407 TSC_hg19_v1_chr20_+_55043664	166	+	TSC_hg19_v1_chr20_+_55043682 AF161513 AK314563	191	+	TSC_hg19_v1_chr20_+_55043703 AF117231 AK302029 AF212244 AK000481	207	+	AJ276678|CASS4|57091|Cas scaffolding protein family member 4##NM_001164116|CASS4|57091|Cas scaffolding protein family member 4##AK308057|CASS4|57091|Cas scaffolding protein family member 4##NM_001164114|CASS4|57091|Cas scaffolding protein family member 4##NM_001164115|CASS4|57091|Cas scaffolding protein family member 4##NM_020356|CASS4|57091|Cas scaffolding protein family member 4##AK027760|CASS4|57091|Cas scaffolding protein family member 4##BC027951|CASS4|57091|Cas scaffolding protein family member 4##AK314653|CASS4|57091|Cas scaffolding protein family member 4##AK295613|CASS4|57091|Cas scaffolding protein family member 4##AK293182|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##AK312774|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##NM_001033522|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##BC001011|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##BC007425|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##NM_001324|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##L02547|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##NM_016407|C20orf43|51507|chromosome 20 open reading frame 43##AF161513|C20orf43|51507|chromosome 20 open reading frame 43##AK314563|C20orf43|51507|chromosome 20 open reading frame 43##AF117231|C20orf43|51507|chromosome 20 open reading frame 43##AK302029|C20orf43|51507|chromosome 20 open reading frame 43##AF212244|C20orf43|51507|chromosome 20 open reading frame 43##AK000481|C20orf43|51507|chromosome 20 open reading frame 43	0.0	
chr2	636921	637060	reg1010757.p1	4.192	+	BC033490 NM_001002919	-348746	-	TSC_hg19_v1_chr2_+_264946 NM_001040649 NM_004300 NM_007099 AK289934 M83653 BC020699 AK291861 BC007422 AB209838 BC106011 AB385551 BT007136 Y16846 M83654 M87546 S62885	-372078	+	BC043234 TSC_hg19_v1_chr2_-_264802 AK292312 BC030778 BC034974	-372211	-	TSC_hg19_v1_chr2_-_677406 BC016010 AL137269 NM_152834	40421	-	TSC_hg19_v1_chr2_+_946534 BC035783 NM_018968 AJ003029 BC125251	309589	+	BC063107 NM_000547 NM_001206744 NM_001206745 NM_175719 BC095448 M17755 J02969 J02970 X17358 Y00406	780265	+	BC033490|FAM150B|285016|family with sequence similarity 150, member B##NM_001002919|FAM150B|285016|family with sequence similarity 150, member B##NM_001040649|ACP1|52|acid phosphatase 1, soluble##NM_004300|ACP1|52|acid phosphatase 1, soluble##NM_007099|ACP1|52|acid phosphatase 1, soluble##AK289934|ACP1|52|acid phosphatase 1, soluble##M83653|ACP1|52|acid phosphatase 1, soluble##BC020699|ACP1|52|acid phosphatase 1, soluble##AK291861|ACP1|52|acid phosphatase 1, soluble##BC007422|ACP1|52|acid phosphatase 1, soluble##AB209838|ACP1|52|acid phosphatase 1, soluble##BC106011|ACP1|52|acid phosphatase 1, soluble##BT007136|ACP1|52|acid phosphatase 1, soluble##Y16846|ACP1|52|acid phosphatase 1, soluble##M83654|ACP1|52|acid phosphatase 1, soluble##M87546|ACP1|52|acid phosphatase 1, soluble##S62885|ACP1|52|acid phosphatase 1, soluble##BC043234|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##AK292312|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC030778|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC034974|SH3YL1|26751|SH3 domain containing, Ysc84-like 1 (S. cerevisiae)##BC016010|TMEM18|129787|transmembrane protein 18##AL137269|TMEM18|129787|transmembrane protein 18##NM_152834|TMEM18|129787|transmembrane protein 18##BC035783|SNTG2|54221|syntrophin, gamma 2##NM_018968|SNTG2|54221|syntrophin, gamma 2##AJ003029|SNTG2|54221|syntrophin, gamma 2##BC125251|SNTG2|54221|syntrophin, gamma 2##BC063107|TPO|7173|thyroid peroxidase##NM_000547|TPO|7173|thyroid peroxidase##NM_001206744|TPO|7173|thyroid peroxidase##NM_001206745|TPO|7173|thyroid peroxidase##NM_175719|TPO|7173|thyroid peroxidase##BC095448|TPO|7173|thyroid peroxidase##M17755|TPO|7173|thyroid peroxidase##J02969|TPO|7173|thyroid peroxidase##J02970|TPO|7173|thyroid peroxidase##X17358|TPO|7173|thyroid peroxidase##Y00406|TPO|7173|thyroid peroxidase	0.0	
chr3	196158082	196158262	reg1029712.p1	4.192	+	BC013113 AF192910 TSC_hg19_v1_chr3_-_196065258 AK310209 NM_001204897 NM_001204898 NM_138461	-92906	-	BC146985 BC146993 BC147021 BC171824 BC171870 TSC_hg19_v1_chr3_-_196065221	-92964	-	TSC_hg19_v1_chr3_-_196045112 BC015348 BC021177 NM_152773	-113059	-	AB018337 TSC_hg19_v1_chr3_-_196159295 BC047420	1111	-	TSC_hg19_v1_chr3_-_196159299 AK026451 AK129880 AK303630 AK308699 AK307899	1127	-	TSC_hg19_v1_chr3_-_196159304 NM_015562	1161	-	AF192910|TM4SF19|116211|transmembrane 4 L six family member 19##AK310209|TM4SF19|116211|transmembrane 4 L six family member 19##NM_001204897|TM4SF19|116211|transmembrane 4 L six family member 19##NM_001204898|TM4SF19|116211|transmembrane 4 L six family member 19##NM_138461|TM4SF19|116211|transmembrane 4 L six family member 19##BC146985|TM4SF19|116211|transmembrane 4 L six family member 19##BC146993|TM4SF19|116211|transmembrane 4 L six family member 19##BC147021|TM4SF19|116211|transmembrane 4 L six family member 19##BC171824|TM4SF19|116211|transmembrane 4 L six family member 19##BC171870|TM4SF19|116211|transmembrane 4 L six family member 19##BC015348|TCTEX1D2|255758|Tctex1 domain containing 2##BC021177|TCTEX1D2|255758|Tctex1 domain containing 2##NM_152773|TCTEX1D2|255758|Tctex1 domain containing 2##AB018337|UBXN7|26043|UBX domain protein 7##BC047420|UBXN7|26043|UBX domain protein 7##AK026451|UBXN7|26043|UBX domain protein 7##AK129880|UBXN7|26043|UBX domain protein 7##AK303630|UBXN7|26043|UBX domain protein 7##AK308699|UBXN7|26043|UBX domain protein 7##AK307899|UBXN7|26043|UBX domain protein 7##NM_015562|UBXN7|26043|UBX domain protein 7	0.0	
chr1	10003452	10003627	reg1010206.p3	4.191	+	NM_022787 BC014943 TSC_hg19_v1_chr1_+_10003497 AK026065 AK222920	-43	+	TSC_hg19_v1_chr1_-_10003358 AB060688 BC007240 AK304348 AK312550	-166	-	BC063443 NM_032368	-714	-	TSC_hg19_v1_chr1_+_10003532 AK315640	4	+	BC063013 NM_052960 BC033883 AF399927 AK312027 AY145438 CU687628	53745	+	TSC_hg19_v1_chr1_+_10093015 AB028839 NM_001105562 NM_006048	89476	+	NM_022787|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##BC014943|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK026065|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK222920|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AB060688|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##BC007240|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK304348|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK312550|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##BC063443|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##NM_032368|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK315640|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##BC063013|RBP7|116362|retinol binding protein 7, cellular##NM_052960|RBP7|116362|retinol binding protein 7, cellular##BC033883|RBP7|116362|retinol binding protein 7, cellular##AF399927|RBP7|116362|retinol binding protein 7, cellular##AK312027|RBP7|116362|retinol binding protein 7, cellular##AY145438|RBP7|116362|retinol binding protein 7, cellular##AB028839|UBE4B|10277|ubiquitination factor E4B##NM_001105562|UBE4B|10277|ubiquitination factor E4B##NM_006048|UBE4B|10277|ubiquitination factor E4B	0.0	
chr18	48712820	48712890	reg1029024.p1	4.191	+	TSC_hg19_v1_chr18_+_48556613 AK290770 BC002379	-156249	+	TSC_hg19_v1_chr18_+_48556582 NM_005359	-156321	+	TSC_hg19_v1_chr18_+_48494409 AK024822 AF308695 AK303027 AK310911 BC014624 AK223507 AB029151	-218434	+	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	10371	-	AY950679 TSC_hg19_v1_chr18_-_48723734	10857	-	TSC_hg19_v1_chr18_-_48724033 NM_016626	11185	-	AK290770|SMAD4|4089|SMAD family member 4##BC002379|SMAD4|4089|SMAD family member 4##NM_005359|SMAD4|4089|SMAD family member 4##AK024822|ELAC1|55520|elaC homolog 1 (E. coli)##AF308695|ELAC1|55520|elaC homolog 1 (E. coli)##AK310911|ELAC1|55520|elaC homolog 1 (E. coli)##BC014624|ELAC1|55520|elaC homolog 1 (E. coli)##AK223507|ELAC1|55520|elaC homolog 1 (E. coli)##AB029151|ELAC1|55520|elaC homolog 1 (E. coli)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)	0.0	
chr3	151986719	151986899	reg1032004.p2	4.191	+	TSC_hg19_v1_chr3_+_151986753 BC050535 BC043493	-67	+	NM_021038 NM_207292	-981	+	TSC_hg19_v1_chr3_+_151591430 AK290420 NM_033050 BC030948 AF247785	-395356	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	536	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	30384	+	AY358260 NM_001123228	71969	-	BC050535|MBNL1|4154|muscleblind-like (Drosophila)##BC043493|MBNL1|4154|muscleblind-like (Drosophila)##NM_021038|MBNL1|4154|muscleblind-like (Drosophila)##NM_207292|MBNL1|4154|muscleblind-like (Drosophila)##AK290420|SUCNR1|56670|succinate receptor 1##NM_033050|SUCNR1|56670|succinate receptor 1##BC030948|SUCNR1|56670|succinate receptor 1##AF247785|SUCNR1|56670|succinate receptor 1##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E	0.0	
chr10	86016906	86017035	reg1030061.p1	4.190	+	BX641033 NM_001012720 NM_001012722 NM_002921 U14910 BC011349 BC008094 BC042536 CU675929 DQ892074 DQ895267	-12143	+	AB463829 AB031547 NM_015613 DQ426882 DQ426881	-15703	-	BX648524 NM_001017924 BC140765 BC144475	-31657	-	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	71424	+	AB032954 TSC_hg19_v1_chr10_+_86131668	114648	+	TSC_hg19_v1_chr10_+_86184685 AK294321	167725	+	BX641033|RGR|5995|retinal G protein coupled receptor##NM_001012720|RGR|5995|retinal G protein coupled receptor##NM_001012722|RGR|5995|retinal G protein coupled receptor##NM_002921|RGR|5995|retinal G protein coupled receptor##U14910|RGR|5995|retinal G protein coupled receptor##BC011349|RGR|5995|retinal G protein coupled receptor##BC008094|RGR|5995|retinal G protein coupled receptor##BC042536|RGR|5995|retinal G protein coupled receptor##DQ892074|RGR|5995|retinal G protein coupled receptor##DQ895267|RGR|5995|retinal G protein coupled receptor##AB031547|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##NM_015613|LRIT1|26103|leucine-rich repeat, immunoglobulin-like and transmembrane domains 1##BX648524|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##NM_001017924|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC140765|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##BC144475|LRIT2|340745|leucine-rich repeat, immunoglobulin-like and transmembrane domains 2##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##AK294321|FAM190B|54462|family with sequence similarity 190, member B	0.223884	CTCF.p2:15:0.224
chr11	115373137	115373203	reg1038069.p2	4.190	+	AY309502 TSC_hg19_v1_chr11_-_115088658	-284522	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-823922	+	AK000134 AK225236 TSC_hg19_v1_chr11_-_114466485 NM_001077639 NM_017678	-906692	-	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	2010	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	1270528	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	1285545	-	AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##AK000134|FAM55D|54827|family with sequence similarity 55, member D##AK225236|FAM55D|54827|family with sequence similarity 55, member D##NM_001077639|FAM55D|54827|family with sequence similarity 55, member D##NM_017678|FAM55D|54827|family with sequence similarity 55, member D##AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259	0.0	
chr11	49191248	49191350	reg1031792.p1	4.190	+	NM_001206631	-110636	-	NM_001206626	-138148	+	NM_001206625	-188053	-	AJ007318 EF488811 TSC_hg19_v1_chr11_-_49229929 AY101595 DQ891167 DQ894349 EF488812	38622	-	TSC_hg19_v1_chr11_-_49230053 DQ088979 AF176574 BC025672 AK312366 AK295368 AK295470 AK300532 M99487 NM_001014986 NM_001193471 NM_001193472 NM_001193473 NM_004476 S76978	38808	-	BC137005 NM_001001955	782643	+	NM_001206631|TRIM64C|646754|tripartite motif containing 64C##NM_001206626|LOC283116|283116|tripartite motif-containing protein LOC642612-like##NM_001206625|LOC120824|120824|tripartite motif-containing protein ENSP00000309378-like##AJ007318|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##EF488811|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AY101595|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##DQ891167|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##DQ894349|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##EF488812|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##DQ088979|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AF176574|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##BC025672|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK312366|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK295368|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK295470|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK300532|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##M99487|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001014986|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193471|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193472|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193473|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_004476|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##S76978|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##BC137005|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13##NM_001001955|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13	0.967721	CTCF.p2:28:0.968
chr12	105116852	105116952	reg1033842.p2	4.190	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-265815	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-266094	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-266131	+	TSC_hg19_v1_chr12_+_105153261 AF131762	36375	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	205361	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	263188	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.0	
chr1	22307169	22307283	reg1033368.p1	4.190	+	NM_007352 AK092382 AK308518 AX747509 BC005216 M18692 AK315798 AK308510 M16630	-3747	+	TSC_hg19_v1_chr1_-_22263804 X62515 NM_005529 M85289	-43460	-	AK127275 NM_001013693 BC146860	-168420	+	BC005918 BC015103 D00306 NM_005747 BC007028 AK225620 AK308514 BC008383 CU675183 CU678941 DQ893182 DQ896490	20931	+	TSC_hg19_v1_chr1_+_22352003 AF161506 BC016053	44786	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	71944	+	NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B##M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A##M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B##X62515|HSPG2|3339|heparan sulfate proteoglycan 2##NM_005529|HSPG2|3339|heparan sulfate proteoglycan 2##M85289|HSPG2|3339|heparan sulfate proteoglycan 2##AK127275|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001013693|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##BC146860|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A##D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AF161506|LINC00339|29092|long intergenic non-protein coding RNA 339##BC016053|LINC00339|29092|long intergenic non-protein coding RNA 339##NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)	0.740351	CTCF.p2:-2:0.740
chr14	34567768	34567949	reg1004059.p1	4.190	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	-147709	-	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1159368	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1769322	+	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	363629	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	441027	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	531497	-	BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6	0.0	
chr17	37910234	37910337	reg1008965.p1	4.190	+	AK290115 NM_001242443	-14066	+	AK125544 NM_001242442	-15262	+	AK294620 NM_001030002 BC006535 TSC_hg19_v1_chr17_+_37894600	-15706	+	BC032707 AF129512 AY377973 AY377975 AY377976 AY377977 AY377978 AY377979 AY377980 AY377981 AY377982 NM_012481 NM_183228 NM_183229 NM_183230 NM_183231 NM_183232	110145	-	AK292383 NM_198844 NM_199321 BC043152 AY251603 AY251604	114158	+	AF119884 NM_018530	163507	-	AK290115|GRB7|2886|growth factor receptor-bound protein 7##NM_001242443|GRB7|2886|growth factor receptor-bound protein 7##AK125544|GRB7|2886|growth factor receptor-bound protein 7##NM_001242442|GRB7|2886|growth factor receptor-bound protein 7##AK294620|GRB7|2886|growth factor receptor-bound protein 7##NM_001030002|GRB7|2886|growth factor receptor-bound protein 7##BC006535|GRB7|2886|growth factor receptor-bound protein 7##BC032707|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AF129512|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377973|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377975|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377976|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377977|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377978|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377979|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377980|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377981|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377982|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_012481|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183228|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183229|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183230|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183231|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183232|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AK292383|ZPBP2|124626|zona pellucida binding protein 2##NM_198844|ZPBP2|124626|zona pellucida binding protein 2##NM_199321|ZPBP2|124626|zona pellucida binding protein 2##BC043152|ZPBP2|124626|zona pellucida binding protein 2##AY251603|ZPBP2|124626|zona pellucida binding protein 2##AY251604|ZPBP2|124626|zona pellucida binding protein 2##AF119884|GSDMB|55876|gasdermin B##NM_018530|GSDMB|55876|gasdermin B	0.12381	
chr2	151281694	151281805	reg1030353.p2	4.190	+	TSC_hg19_v1_chr2_-_150444290 NM_015702	-837442	-	TSC_hg19_v1_chr2_-_150444250 BC023995 BC010894 AK310001 AF161510 BC022859 BC000932	-837492	-	AF131802 TSC_hg19_v1_chr2_-_150444230 AK313284	-837524	-	X97758 BC012513 TSC_hg19_v1_chr2_-_151344182 AK298007 AK311312 NM_005168 AK313224	62415	-	TSC_hg19_v1_chr2_-_152118378 BC136410 BC136411 AK127552 NM_198557	836584	-	TSC_hg19_v1_chr2_-_152146171 BC001268	864403	-	NM_015702|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC023995|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC010894|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK310001|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF161510|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC022859|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC000932|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF131802|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK313284|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##X97758|RND3|390|Rho family GTPase 3##BC012513|RND3|390|Rho family GTPase 3##AK298007|RND3|390|Rho family GTPase 3##NM_005168|RND3|390|Rho family GTPase 3##AK313224|RND3|390|Rho family GTPase 3##BC136410|RBM43|375287|RNA binding motif protein 43##BC136411|RBM43|375287|RNA binding motif protein 43##AK127552|RBM43|375287|RNA binding motif protein 43##NM_198557|RBM43|375287|RNA binding motif protein 43##BC001268|NMI|9111|N-myc (and STAT) interactor	0.065185	
chr3	183613323	183613504	reg1000498.p2	4.190	+	TSC_hg19_v1_chr3_-_183602690 NM_001037639 NM_018622	-10705	-	TSC_hg19_v1_chr3_-_183602669 BC003653	-10735	-	TSC_hg19_v1_chr3_-_183602663 AK024765	-10751	-	TSC_hg19_v1_chr3_-_183735673 BC142670 BC142719 U83661 AF104942 AY754874 AY754875 AY754876 AB209454 BC051358 NM_001023587 NM_005688	122278	-	AY159812 NM_182537	135918	+	NM_001145143	136116	+	NM_001037639|PARL|55486|presenilin associated, rhomboid-like##NM_018622|PARL|55486|presenilin associated, rhomboid-like##BC003653|PARL|55486|presenilin associated, rhomboid-like##AK024765|PARL|55486|presenilin associated, rhomboid-like##BC142670|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##BC142719|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##U83661|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AF104942|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754874|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754875|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY754876|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AB209454|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##BC051358|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##NM_001023587|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##NM_005688|ABCC5|10057|ATP-binding cassette, sub-family C (CFTR/MRP), member 5##AY159812|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D##NM_182537|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D##NM_001145143|HTR3D|200909|5-hydroxytryptamine (serotonin) receptor 3 family member D	0.0	
chr6	17815588	17815682	reg1002911.p1	4.190	+	Z25535 AB384675 AK295644 BC052965 NM_005124 TSC_hg19_v1_chr6_-_17707139 AB210024	-108733	-	TSC_hg19_v1_chr6_+_17600620 NM_016255 AK296393 AK312814 AF097027 BC047881	-215036	+	AK312362 NM_006366 TSC_hg19_v1_chr6_+_17393918 AL832154 AK295600 AK294215 AK293134 AK297538 AK308461 BC008481	-421853	+	AJ291578 AJ291579 BC127115 BC127116 AY014403 AY014404 TSC_hg19_v1_chr6_-_17987786	172125	-	TSC_hg19_v1_chr6_-_17987867 BC062673 NM_001105566 NM_001105567 NM_001105568 NM_001243423 NM_022113	172231	-	AY324850 BC103888 BC103889 BC103890 NM_198586	307215	-	Z25535|NUP153|9972|nucleoporin 153kDa##AK295644|NUP153|9972|nucleoporin 153kDa##BC052965|NUP153|9972|nucleoporin 153kDa##NM_005124|NUP153|9972|nucleoporin 153kDa##AB210024|NUP153|9972|nucleoporin 153kDa##NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1##AK296393|FAM8A1|51439|family with sequence similarity 8, member A1##AK312814|FAM8A1|51439|family with sequence similarity 8, member A1##AF097027|FAM8A1|51439|family with sequence similarity 8, member A1##BC047881|FAM8A1|51439|family with sequence similarity 8, member A1##AK312362|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##NM_006366|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AL832154|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK295600|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK294215|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK293134|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK297538|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK308461|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##BC008481|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AJ291578|KIF13A|63971|kinesin family member 13A##AJ291579|KIF13A|63971|kinesin family member 13A##BC127115|KIF13A|63971|kinesin family member 13A##BC127116|KIF13A|63971|kinesin family member 13A##AY014403|KIF13A|63971|kinesin family member 13A##AY014404|KIF13A|63971|kinesin family member 13A##BC062673|KIF13A|63971|kinesin family member 13A##NM_001105566|KIF13A|63971|kinesin family member 13A##NM_001105567|KIF13A|63971|kinesin family member 13A##NM_001105568|KIF13A|63971|kinesin family member 13A##NM_001243423|KIF13A|63971|kinesin family member 13A##NM_022113|KIF13A|63971|kinesin family member 13A##AY324850|NHLRC1|378884|NHL repeat containing 1##BC103888|NHLRC1|378884|NHL repeat containing 1##BC103889|NHLRC1|378884|NHL repeat containing 1##BC103890|NHLRC1|378884|NHL repeat containing 1##NM_198586|NHLRC1|378884|NHL repeat containing 1	0.021139	
chr7	55617846	55617990	reg1033941.p1	4.190	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	-184346	+	AK095857 NM_018697	-184778	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-530972	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	22122	-	TSC_hg19_v1_chr7_-_55640073 AB097004	22164	-	BC016650 AK314338 TSC_hg19_v1_chr7_-_55640107	22187	-	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AB097004|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##BC016650|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK314338|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	1.100665	CTCF.p2:19:0.629	CTCF.p2:48:0.297
chr8	137116050	137116129	reg1035806.p1	4.190	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-645888	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-646431	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1390815	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2393017	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2810155	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3599193	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.0	
chr11	109969430	109969553	reg1030402.p1	4.189	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	-5361	+	AK095101 TSC_hg19_v1_chr11_+_109963524	-5963	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-676592	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	197822	-	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	331225	+	AY496266 TSC_hg19_v1_chr11_-_110582834	613312	-	NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20	0.065365	
chr11	15096240	15096421	reg1006455.p1	4.189	+	BC008428 AK291188 BC092468 NM_000728	-1204	+	M26095 X03662 M64486 BC093753 BC101599 BC143562 BC069684 BC069704 BC069760 BC069778 NM_001033952 NM_001033953 NM_001741 X00356	-102510	-	AK054728 TSC_hg19_v1_chr11_+_14926557	-169781	+	AB236159 NM_001031853	37639	+	AB236158 NM_001042536	40153	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	1328071	-	BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##M26095|CALCA|796|calcitonin-related polypeptide alpha##X03662|CALCA|796|calcitonin-related polypeptide alpha##M64486|CALCA|796|calcitonin-related polypeptide alpha##BC093753|CALCA|796|calcitonin-related polypeptide alpha##BC101599|CALCA|796|calcitonin-related polypeptide alpha##BC143562|CALCA|796|calcitonin-related polypeptide alpha##BC069684|CALCA|796|calcitonin-related polypeptide alpha##BC069704|CALCA|796|calcitonin-related polypeptide alpha##BC069760|CALCA|796|calcitonin-related polypeptide alpha##BC069778|CALCA|796|calcitonin-related polypeptide alpha##NM_001033952|CALCA|796|calcitonin-related polypeptide alpha##NM_001033953|CALCA|796|calcitonin-related polypeptide alpha##NM_001741|CALCA|796|calcitonin-related polypeptide alpha##X00356|CALCA|796|calcitonin-related polypeptide alpha##AK054728|CALCB|797|calcitonin-related polypeptide beta##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6	0.693814	CTCF.p2:5:0.694
chr11	35061841	35061973	reg1030843.p1	4.189	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-123750	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-124018	-	NM_001135024 NM_001166158 NM_003477	-124231	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	98493	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	98827	+	TSC_hg19_v1_chr11_+_35160821 M59040	98911	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr1	181399403	181399518	reg1031285.p1	4.189	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-341595	+	NM_016545	-341823	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-396310	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	53240	+	BC137223 BC137224 AK128654 NM_001009992	631337	-	TSC_hg19_v1_chr1_-_182354649 AK301600	955222	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.0	
chr1	212113309	212113477	reg1029426.p1	4.189	+	D86960 NM_014873 TSC_hg19_v1_chr1_-_212004119	-109263	-	BC034621 TSC_hg19_v1_chr1_-_212003681	-109645	-	BT019729 CU688108 AB527570 AY045701 Z29066 AK223353 AK225522 AK303092 TSC_hg19_v1_chr1_-_211848968 U11050 BC043502 BC065932 BC052807 NM_001204182 NM_001204183 NM_002497	-264485	-	AM392654 CU676544 BC030716 TSC_hg19_v1_chr1_-_212208866 BC033918 AK001363 AK022509 BC009918 BC020523 AK297225 AK001598 NM_001199809 NM_001199811 NM_001199812 NM_015434	95497	-	NM_016448 AK292343 TSC_hg19_v1_chr1_+_212209090 AK000742 AK303346	95621	+	BC033540 TSC_hg19_v1_chr1_+_212209112 AF345896	95725	+	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##BC034621|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##BT019729|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AY045701|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##Z29066|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK223353|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK225522|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK303092|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##U11050|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC043502|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC065932|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC052807|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204182|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204183|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_002497|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AM392654|INTS7|25896|integrator complex subunit 7##BC030716|INTS7|25896|integrator complex subunit 7##BC033918|INTS7|25896|integrator complex subunit 7##AK001363|INTS7|25896|integrator complex subunit 7##AK022509|INTS7|25896|integrator complex subunit 7##BC009918|INTS7|25896|integrator complex subunit 7##BC020523|INTS7|25896|integrator complex subunit 7##AK297225|INTS7|25896|integrator complex subunit 7##AK001598|INTS7|25896|integrator complex subunit 7##NM_001199809|INTS7|25896|integrator complex subunit 7##NM_001199811|INTS7|25896|integrator complex subunit 7##NM_001199812|INTS7|25896|integrator complex subunit 7##NM_015434|INTS7|25896|integrator complex subunit 7##NM_016448|DTL|51514|denticleless homolog (Drosophila)##AK292343|DTL|51514|denticleless homolog (Drosophila)##AK000742|DTL|51514|denticleless homolog (Drosophila)##AK303346|DTL|51514|denticleless homolog (Drosophila)##BC033540|DTL|51514|denticleless homolog (Drosophila)##AF345896|DTL|51514|denticleless homolog (Drosophila)	0.0	
chr12	6422183	6422291	reg1031336.p1	4.189	+	AK095373 NM_001144857	-421	+	AK023741 NM_001144856	-2139	+	TSC_hg19_v1_chr12_+_6419886 BC040273	-2352	+	TSC_hg19_v1_chr12_-_6442970 AY182755	20757	-	AB590201 EU176385 EU176726 CU679633 EU927389 M60275 TSC_hg19_v1_chr12_-_6451145	28825	-	M58286 TSC_hg19_v1_chr12_-_6451171 M33294 AK056611 AK298729 AK304517 M63121 AK308061 AK291088 BC010140 AK315509 NM_001065	28983	-	AK095373|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144857|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AK023741|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144856|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC040273|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AY182755|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU176385|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU176726|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU927389|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M60275|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M58286|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M33294|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK056611|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK298729|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK304517|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M63121|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK308061|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK291088|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##BC010140|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK315509|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##NM_001065|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A	0.0	
chr2	229998015	229998120	reg1029359.p1	4.189	+	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-951705	-	AK097409 NM_178821 BC036377 AK098821 AK301861	-1261715	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	-1319476	+	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	137938	-	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	581181	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	788594	-	HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12	0.834893	CTCF.p2:-3:0.835
chr3	69997555	69997679	reg1032862.p1	4.189	+	NM_000248 NM_001184968 NM_198158 NM_198178 Z29678 BC012503 BC065243 BC026961 GU355676	-11806	+	NM_198177 AB006989 AK297858	-82216	+	AB006988 NM_006722	-184656	+	TSC_hg19_v1_chr3_+_70048883 BC015590	51271	+	TSC_hg19_v1_chr3_-_71114076 AK074569 NM_001244813	1116579	-	TSC_hg19_v1_chr3_-_71179732 AK027264	1182106	-	NM_000248|MITF|4286|microphthalmia-associated transcription factor##NM_001184968|MITF|4286|microphthalmia-associated transcription factor##NM_198158|MITF|4286|microphthalmia-associated transcription factor##NM_198178|MITF|4286|microphthalmia-associated transcription factor##Z29678|MITF|4286|microphthalmia-associated transcription factor##BC012503|MITF|4286|microphthalmia-associated transcription factor##BC065243|MITF|4286|microphthalmia-associated transcription factor##BC026961|MITF|4286|microphthalmia-associated transcription factor##GU355676|MITF|4286|microphthalmia-associated transcription factor##NM_198177|MITF|4286|microphthalmia-associated transcription factor##AB006989|MITF|4286|microphthalmia-associated transcription factor##AK297858|MITF|4286|microphthalmia-associated transcription factor##AB006988|MITF|4286|microphthalmia-associated transcription factor##NM_006722|MITF|4286|microphthalmia-associated transcription factor##AK074569|FOXP1|27086|forkhead box P1##NM_001244813|FOXP1|27086|forkhead box P1##AK027264|FOXP1|27086|forkhead box P1	0.902017	CTCF.p2:6:0.902
chr7	134670978	134671134	reg1015528.p1	4.189	+	BC014035 TSC_hg19_v1_chr7_+_134576197 BC061926 BC005006 D90452 D90453	-94783	+	NM_033139 NM_033140 TSC_hg19_v1_chr7_+_134576161	-94901	+	TSC_hg19_v1_chr7_+_134464419 BC040354	-206634	+	TSC_hg19_v1_chr7_+_134671258 AK302827 NM_178563 BC030651 AL832281 AK023045 AK311252	229	+	NM_018295 TSC_hg19_v1_chr7_+_134832838 AK001862 AK225055 AK301268 BC020942	161791	+	NM_001243753 NM_001243755	183169	-	BC014035|CALD1|800|caldesmon 1##BC061926|CALD1|800|caldesmon 1##BC005006|CALD1|800|caldesmon 1##D90452|CALD1|800|caldesmon 1##D90453|CALD1|800|caldesmon 1##NM_033139|CALD1|800|caldesmon 1##NM_033140|CALD1|800|caldesmon 1##BC040354|CALD1|800|caldesmon 1##AK302827|AGBL3|340351|ATP/GTP binding protein-like 3##NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3##BC030651|AGBL3|340351|ATP/GTP binding protein-like 3##AL832281|AGBL3|340351|ATP/GTP binding protein-like 3##AK023045|AGBL3|340351|ATP/GTP binding protein-like 3##NM_018295|TMEM140|55281|transmembrane protein 140##AK001862|TMEM140|55281|transmembrane protein 140##AK225055|TMEM140|55281|transmembrane protein 140##AK301268|TMEM140|55281|transmembrane protein 140##BC020942|TMEM140|55281|transmembrane protein 140##NM_001243753|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243755|C7orf49|78996|chromosome 7 open reading frame 49	0.0	
chr7	139910152	139910314	reg1030296.p1	4.189	+	TSC_hg19_v1_chr7_+_139877154 AK026372	-33077	+	TSC_hg19_v1_chr7_-_139876751 AB528281 AK131497 NM_030647	-33371	-	BC081541 NM_022750	-146713	-	AL136583 AL136583 TSC_hg19_v1_chr7_-_140098295 AK299276 BC028380 BC028380 BC046567 BC046567 AK296543 AK300265 AK074823 AK074823 NM_032295 NM_207113	188066	-	NM_001008749	193609	+	TSC_hg19_v1_chr7_-_140179165 AB209298 AB527778 DQ892404 EU176516 BC064838 AM236048 BC037400 BC051821 BC012398 AK297361 AK315552	268929	-	AK026372|LOC100134229|100134229|uncharacterized LOC100134229##AK131497|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)##NM_030647|JHDM1D|80853|jumonji C domain containing histone demethylase 1 homolog D (S. cerevisiae)##BC081541|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##NM_022750|PARP12|64761|poly (ADP-ribose) polymerase family, member 12##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AL136583|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK299276|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC028380|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##BC046567|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK296543|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK300265|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##AK074823|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_032295|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_207113|SLC37A3|84255|solute carrier family 37 (glycerol-3-phosphate transporter), member 3##NM_001008749|RAB19|401409|RAB19, member RAS oncogene family##AB209298|MKRN1|23608|makorin ring finger protein 1##DQ892404|MKRN1|23608|makorin ring finger protein 1##EU176516|MKRN1|23608|makorin ring finger protein 1##BC064838|MKRN1|23608|makorin ring finger protein 1##AM236048|MKRN1|23608|makorin ring finger protein 1##BC037400|MKRN1|23608|makorin ring finger protein 1##BC051821|MKRN1|23608|makorin ring finger protein 1##BC012398|MKRN1|23608|makorin ring finger protein 1##AK297361|MKRN1|23608|makorin ring finger protein 1##AK315552|MKRN1|23608|makorin ring finger protein 1	0.020366	
chr11	68151271	68151451	reg1005828.p1	4.188	+	AF088027 TSC_hg19_v1_chr11_+_68115450	-35925	+	TSC_hg19_v1_chr11_+_68080058 AB017498 NM_002335 AF077820 AF064548 BC150595 BC098397	-71272	+	TSC_hg19_v1_chr11_-_68039453 NM_022338	-111903	-	TSC_hg19_v1_chr11_+_68228219 NM_001164160 NM_001164161 NM_001164162 NM_001164163 NM_001164164 NM_018312 BC070121 AK298180 AK303315 AK315136 CR936718 CR749815 CR933658 AB046778	76848	+	AK001920 TSC_hg19_v1_chr11_+_68367929	216515	+	TSC_hg19_v1_chr11_+_68451978 NM_015973	300622	+	AF088027|LRP5|4041|low density lipoprotein receptor-related protein 5##AB017498|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_002335|LRP5|4041|low density lipoprotein receptor-related protein 5##AF077820|LRP5|4041|low density lipoprotein receptor-related protein 5##AF064548|LRP5|4041|low density lipoprotein receptor-related protein 5##BC150595|LRP5|4041|low density lipoprotein receptor-related protein 5##BC098397|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_022338|C11orf24|53838|chromosome 11 open reading frame 24##NM_001164160|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164161|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164162|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164163|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164164|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_018312|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##BC070121|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK298180|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK303315|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK315136|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR936718|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR749815|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR933658|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AB046778|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK001920|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_015973|GAL|51083|galanin prepropeptide	0.0	
chr1	235069464	235069568	reg1025548.p2	4.188	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-173742	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-324270	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-325658	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	222573	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	222715	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	255047	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr1	27189358	27189456	reg1031907.p2	4.188	+	TSC_hg19_v1_chr1_+_27153178 BC066776 NM_032283	-36210	+	AK000484 AK225521 AK301626 NM_001202554 AK056539	-74726	+	TSC_hg19_v1_chr1_+_27114455 NM_017837 BC013568	-74951	+	BC023552 AF029082 NM_006142 TSC_hg19_v1_chr1_+_27189639 BC001550 BC000329 BC002995 BC000995 AB464718 M93010 DQ894162 CU674492 CR541905 CR541926	258	+	CU675813 AY364261 TSC_hg19_v1_chr1_-_27216757 BC007815 BC008634 BC020272	27268	-	TSC_hg19_v1_chr1_-_27216775 AK022535 AY358864	27365	-	BC066776|ZDHHC18|84243|zinc finger, DHHC-type containing 18##NM_032283|ZDHHC18|84243|zinc finger, DHHC-type containing 18##AK000484|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK225521|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK301626|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_001202554|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##AK056539|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##NM_017837|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##BC013568|PIGV|55650|phosphatidylinositol glycan anchor biosynthesis, class V##BC023552|SFN|2810|stratifin##AF029082|SFN|2810|stratifin##NM_006142|SFN|2810|stratifin##BC001550|SFN|2810|stratifin##BC000329|SFN|2810|stratifin##BC002995|SFN|2810|stratifin##BC000995|SFN|2810|stratifin##M93010|SFN|2810|stratifin##DQ894162|SFN|2810|stratifin##CR541905|SFN|2810|stratifin##CR541926|SFN|2810|stratifin##AY364261|GPN2|54707|GPN-loop GTPase 2##BC007815|GPN2|54707|GPN-loop GTPase 2##BC008634|GPN2|54707|GPN-loop GTPase 2##BC020272|GPN2|54707|GPN-loop GTPase 2##AK022535|GPN2|54707|GPN-loop GTPase 2##AY358864|GPN2|54707|GPN-loop GTPase 2	0.086813	
chr17	16311685	16311865	reg1027061.p2	4.188	+	AK129498 BC015127 BC026301 BC031027 BC038999 TSC_hg19_v1_chr17_+_16284408 BC046123 BC009301	-27361	+	TSC_hg19_v1_chr17_+_16284404 AK300882	-27373	+	TSC_hg19_v1_chr17_+_16284371 BC000379 NM_018955	-27411	+	TSC_hg19_v1_chr17_+_16318881 AK289705 NM_016113 BC018926 BC051305	7098	+	TSC_hg19_v1_chr17_+_16318917 AK001896	7143	+	TSC_hg19_v1_chr17_+_16319096 AF103906	7330	+	AK129498|UBB|7314|ubiquitin B##BC015127|UBB|7314|ubiquitin B##BC026301|UBB|7314|ubiquitin B##BC031027|UBB|7314|ubiquitin B##BC038999|UBB|7314|ubiquitin B##BC046123|UBB|7314|ubiquitin B##BC009301|UBB|7314|ubiquitin B##AK300882|UBB|7314|ubiquitin B##BC000379|UBB|7314|ubiquitin B##NM_018955|UBB|7314|ubiquitin B##AK289705|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##NM_016113|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##BC018926|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##BC051305|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AK001896|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AF103906|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2	0.0	
chr1	90823560	90823741	reg1029842.p1	4.188	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	-362934	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-536086	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-536192	+	BC126439 BC126441 AY338397 NM_020063	359135	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	663388	-	TSC_hg19_v1_chr1_-_91487583 BC041138 AK291520	663913	-	NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644##BC041138|ZNF644|84146|zinc finger protein 644##AK291520|ZNF644|84146|zinc finger protein 644	0.0	
chr22	19073289	19073469	reg1033432.p2	4.188	+	TSC_hg19_v1_chr22_+_18957980 AB051434	-115373	+	BC118597 BC121809 NM_001195226 NM_016335 U79754	-149365	-	AB209472 TSC_hg19_v1_chr22_-_18923807 BC068260 BC094736 BC036534	-149648	-	CU012993 CU013281 CU691894 DQ894160 FJ032369 CR456433 L77560 X83545 TSC_hg19_v1_chr22_-_19109911 BC032430 D79985	36435	-	TSC_hg19_v1_chr22_-_19109938 BC020339 BC035425 CR936871 AK291670 AK295697 AK296337 AK304382 AK303130 BC040500 NM_001173533 NM_001173534 NM_001184781 NM_005137	36561	-	L77564 NM_053006	44941	+	AB051434|DGCR5|26220|DiGeorge syndrome critical region gene 5 (non-protein coding)##BC118597|PRODH|5625|proline dehydrogenase (oxidase) 1##BC121809|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_001195226|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_016335|PRODH|5625|proline dehydrogenase (oxidase) 1##U79754|PRODH|5625|proline dehydrogenase (oxidase) 1##AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1##BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1##BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1##BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1##CU012993|DGCR2|9993|DiGeorge syndrome critical region gene 2##CU013281|DGCR2|9993|DiGeorge syndrome critical region gene 2##DQ894160|DGCR2|9993|DiGeorge syndrome critical region gene 2##FJ032369|DGCR2|9993|DiGeorge syndrome critical region gene 2##CR456433|DGCR2|9993|DiGeorge syndrome critical region gene 2##L77560|DGCR2|9993|DiGeorge syndrome critical region gene 2##X83545|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC032430|DGCR2|9993|DiGeorge syndrome critical region gene 2##D79985|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC020339|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC035425|DGCR2|9993|DiGeorge syndrome critical region gene 2##CR936871|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK291670|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK295697|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK296337|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK304382|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK303130|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC040500|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001173533|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001173534|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001184781|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_005137|DGCR2|9993|DiGeorge syndrome critical region gene 2##L77564|TSSK2|23617|testis-specific serine kinase 2##NM_053006|TSSK2|23617|testis-specific serine kinase 2	0.0	
chr4	184521476	184521605	reg1036679.p1	4.188	+	TSC_hg19_v1_chr4_+_184427252 AK294310 AB196793	-94249	+	TSC_hg19_v1_chr4_+_184426172 AK314000 NM_001564 BC030128 AB012853 AF053537 AB464592 AJ006851 CU688818	-95293	+	TSC_hg19_v1_chr4_-_184425612 BC038563	-95902	-	CU688324 BC107432 TSC_hg19_v1_chr4_-_184580305 AK021702 AK293274 AK315515 BC017472 BC067752 NM_152682	58702	-	NM_021942 NM_199053 TSC_hg19_v1_chr4_+_184580445 AL833571 AK096345 BX648499 BX647127 BX538044 BC040530 BC051724	58909	+	TSC_hg19_v1_chr4_+_184580539 BC139745	58971	+	AK294310|ING2|3622|inhibitor of growth family, member 2##AB196793|ING2|3622|inhibitor of growth family, member 2##AK314000|ING2|3622|inhibitor of growth family, member 2##NM_001564|ING2|3622|inhibitor of growth family, member 2##BC030128|ING2|3622|inhibitor of growth family, member 2##AB012853|ING2|3622|inhibitor of growth family, member 2##AF053537|ING2|3622|inhibitor of growth family, member 2##AJ006851|ING2|3622|inhibitor of growth family, member 2##BC038563|LOC389247|389247|uncharacterized LOC389247##BC107432|RWDD4|201965|RWD domain containing 4##AK021702|RWDD4|201965|RWD domain containing 4##AK293274|RWDD4|201965|RWD domain containing 4##AK315515|RWDD4|201965|RWD domain containing 4##BC017472|RWDD4|201965|RWD domain containing 4##BC067752|RWDD4|201965|RWD domain containing 4##NM_152682|RWDD4|201965|RWD domain containing 4##NM_021942|C4orf41|60684|chromosome 4 open reading frame 41##NM_199053|C4orf41|60684|chromosome 4 open reading frame 41##AL833571|C4orf41|60684|chromosome 4 open reading frame 41##AK096345|C4orf41|60684|chromosome 4 open reading frame 41##BX648499|C4orf41|60684|chromosome 4 open reading frame 41##BX647127|C4orf41|60684|chromosome 4 open reading frame 41##BX538044|C4orf41|60684|chromosome 4 open reading frame 41##BC040530|C4orf41|60684|chromosome 4 open reading frame 41##BC051724|C4orf41|60684|chromosome 4 open reading frame 41##BC139745|C4orf41|60684|chromosome 4 open reading frame 41	0.898591	CTCF.p2:-4:0.899
chr9	97301876	97301993	reg1039837.p1	4.188	+	TSC_hg19_v1_chr9_+_97136850 NM_032558	-165101	+	HQ258506 BC130390 BC143798 NM_017561	-211020	-	TSC_hg19_v1_chr9_+_97021599 NM_194320 AK289742 AK093956	-280344	+	CR536483 HQ258389 BC113632 BC117477 NM_003837 Y10812	54106	-	AF073475 CU680450 D26054 D26055 D26056 AY544122 TSC_hg19_v1_chr9_-_97401681	99702	-	TSC_hg19_v1_chr9_-_97401794 BC012927 M19922	99852	-	NM_032558|HIATL1|84641|hippocampus abundant transcript-like 1##HQ258506|FAM22F|54754|family with sequence similarity 22, member F##BC130390|FAM22F|54754|family with sequence similarity 22, member F##BC143798|FAM22F|54754|family with sequence similarity 22, member F##NM_017561|FAM22F|54754|family with sequence similarity 22, member F##NM_194320|ZNF169|169841|zinc finger protein 169##AK289742|ZNF169|169841|zinc finger protein 169##AK093956|ZNF169|169841|zinc finger protein 169##CR536483|FBP2|8789|fructose-1,6-bisphosphatase 2##HQ258389|FBP2|8789|fructose-1,6-bisphosphatase 2##BC113632|FBP2|8789|fructose-1,6-bisphosphatase 2##BC117477|FBP2|8789|fructose-1,6-bisphosphatase 2##NM_003837|FBP2|8789|fructose-1,6-bisphosphatase 2##Y10812|FBP2|8789|fructose-1,6-bisphosphatase 2##AF073475|FBP1|2203|fructose-1,6-bisphosphatase 1##D26054|FBP1|2203|fructose-1,6-bisphosphatase 1##D26055|FBP1|2203|fructose-1,6-bisphosphatase 1##D26056|FBP1|2203|fructose-1,6-bisphosphatase 1##AY544122|FBP1|2203|fructose-1,6-bisphosphatase 1##BC012927|FBP1|2203|fructose-1,6-bisphosphatase 1##M19922|FBP1|2203|fructose-1,6-bisphosphatase 1	0.0	
chr12	126018292	126018464	reg1014769.p2	4.187	+	NM_052907	-207217	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-468310	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-468437	+	NM_001136103	2733569	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	3290065	-	BC043528 TSC_hg19_v1_chr12_+_129337985	3319606	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.0	
chr1	29203539	29203720	reg1000249.p1	4.187	+	NM_000911 U07882	-64976	+	TSC_hg19_v1_chr1_+_29063503 AK303833 NM_001172828 AF432214 AF155095 AF192968 DQ892157 DQ895352 CU678040 AB451335 AB451484	-140092	+	NM_001173128 NM_016258 BC002559 AK292581 TSC_hg19_v1_chr1_+_29063435	-140346	+	TSC_hg19_v1_chr1_+_29213611 AB209649 NM_001166005 NM_001166007 NM_004437 NM_203342 NM_203343	9962	+	TSC_hg19_v1_chr1_+_29213624 M14993 M61733 J03796	10028	+	TSC_hg19_v1_chr1_+_29241080 NM_001166006 BC039079 AK310655	37452	+	NM_000911|OPRD1|4985|opioid receptor, delta 1##U07882|OPRD1|4985|opioid receptor, delta 1##AK303833|YTHDF2|51441|YTH domain family, member 2##NM_001172828|YTHDF2|51441|YTH domain family, member 2##AF432214|YTHDF2|51441|YTH domain family, member 2##AF155095|YTHDF2|51441|YTH domain family, member 2##AF192968|YTHDF2|51441|YTH domain family, member 2##DQ892157|YTHDF2|51441|YTH domain family, member 2##DQ895352|YTHDF2|51441|YTH domain family, member 2##AB451335|YTHDF2|51441|YTH domain family, member 2##AB451484|YTHDF2|51441|YTH domain family, member 2##NM_001173128|YTHDF2|51441|YTH domain family, member 2##NM_016258|YTHDF2|51441|YTH domain family, member 2##BC002559|YTHDF2|51441|YTH domain family, member 2##AK292581|YTHDF2|51441|YTH domain family, member 2##AB209649|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166005|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166007|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_004437|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203342|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_203343|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M14993|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##M61733|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##J03796|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##NM_001166006|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##BC039079|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)##AK310655|EPB41|2035|erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked)	0.0	
chr16	56922793	56922934	reg1024660.p1	4.187	+	AK315298 NM_000339 NM_001126107 NM_001126108 AK223133 X91220 U44128 AB463268	-23731	+	AK294176 NM_001242796	-105474	+	NM_001242795 AK056637 TSC_hg19_v1_chr16_+_56815740	-107128	+	NM_001010989 NM_001010990 NM_014685	42884	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	43278	+	M30185 AK297699 NM_000078 TSC_hg19_v1_chr16_+_56995861 AK291586 BC025739 EU176529 CU693046 BT020064 M83573	72974	+	AK315298|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_000339|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126107|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126108|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK223133|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##X91220|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##U44128|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK294176|NUP93|9688|nucleoporin 93kDa##NM_001242796|NUP93|9688|nucleoporin 93kDa##NM_001242795|NUP93|9688|nucleoporin 93kDa##AK056637|NUP93|9688|nucleoporin 93kDa##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##M30185|CETP|1071|cholesteryl ester transfer protein, plasma##AK297699|CETP|1071|cholesteryl ester transfer protein, plasma##NM_000078|CETP|1071|cholesteryl ester transfer protein, plasma##AK291586|CETP|1071|cholesteryl ester transfer protein, plasma##BC025739|CETP|1071|cholesteryl ester transfer protein, plasma##EU176529|CETP|1071|cholesteryl ester transfer protein, plasma##BT020064|CETP|1071|cholesteryl ester transfer protein, plasma##M83573|CETP|1071|cholesteryl ester transfer protein, plasma	0.0	
chr21	32314636	32314721	reg1032250.p1	4.187	+	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	-60820	-	AJ457063 AB096962 NM_181606	-112690	-	BC130397 BC133033 AB096961 AJ457064 NM_175857	-129114	-	AB096964 NM_001099219	96116	-	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	616680	-	TSC_hg19_v1_chr21_+_33032005 NM_000454 AK312116 BC001034 X02317 EF151142 AB464254 AY049787 AY450286 BT006676 CR450355 CR541742 CU674512 EF143990	717329	+	AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##BC130397|KRTAP8-1|337879|keratin associated protein 8-1##BC133033|KRTAP8-1|337879|keratin associated protein 8-1##AB096961|KRTAP8-1|337879|keratin associated protein 8-1##AJ457064|KRTAP8-1|337879|keratin associated protein 8-1##NM_175857|KRTAP8-1|337879|keratin associated protein 8-1##AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##NM_000454|SOD1|6647|superoxide dismutase 1, soluble##AK312116|SOD1|6647|superoxide dismutase 1, soluble##BC001034|SOD1|6647|superoxide dismutase 1, soluble##X02317|SOD1|6647|superoxide dismutase 1, soluble##EF151142|SOD1|6647|superoxide dismutase 1, soluble##AY049787|SOD1|6647|superoxide dismutase 1, soluble##AY450286|SOD1|6647|superoxide dismutase 1, soluble##BT006676|SOD1|6647|superoxide dismutase 1, soluble##CR450355|SOD1|6647|superoxide dismutase 1, soluble##CR541742|SOD1|6647|superoxide dismutase 1, soluble##EF143990|SOD1|6647|superoxide dismutase 1, soluble	0.193201	
chr2	135397012	135397079	reg1039256.p1	4.187	+	NM_002410 D17716 AF113921	-385160	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-1071007	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-1217691	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	79511	-	AK125008 NM_138326 BC016018 BC107420 AB071418	199173	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	279352	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.0	
chr4	10556542	10556628	reg1006497.p2	4.187	+	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-97575	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-438049	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-438107	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	129816	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	873947	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2929366	-	BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr7	100608782	100608849	reg1003701.p1	4.187	+	BC105060 BC105062 BC143469 AK291321 TSC_hg19_v1_chr7_-_100493509 BC001541 AK223443 AF334270 BC026315 BC036813 NM_000665 NM_015831	-115304	-	BC017456 BC067904 AK292467 NM_001015072	-121510	-	TSC_hg19_v1_chr7_+_100472809 BC109116	-135989	+	AK130455 TSC_hg19_v1_chr7_+_100612694	3878	+	NM_001164462	4088	+	TSC_hg19_v1_chr7_+_100663360 AJ606307 AJ606308 NM_001040105	54550	+	BC105060|ACHE|43|acetylcholinesterase##BC105062|ACHE|43|acetylcholinesterase##BC143469|ACHE|43|acetylcholinesterase##AK291321|ACHE|43|acetylcholinesterase##BC001541|ACHE|43|acetylcholinesterase##AK223443|ACHE|43|acetylcholinesterase##AF334270|ACHE|43|acetylcholinesterase##BC026315|ACHE|43|acetylcholinesterase##BC036813|ACHE|43|acetylcholinesterase##NM_000665|ACHE|43|acetylcholinesterase##NM_015831|ACHE|43|acetylcholinesterase##BC017456|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##BC067904|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##AK292467|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##NM_001015072|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##BC109116|SRRT|51593|serrate RNA effector molecule homolog (Arabidopsis)##NM_001164462|MUC12|10071|mucin 12, cell surface associated##AJ606307|MUC17|140453|mucin 17, cell surface associated##AJ606308|MUC17|140453|mucin 17, cell surface associated##NM_001040105|MUC17|140453|mucin 17, cell surface associated	0.993384	CTCF.p2:-35:0.993
chrX	48998729	48998829	reg1034472.p1	4.187	+	AB209806 CU674194 BC000397 BC003148 NM_015698 TSC_hg19_v1_chrX_-_48980086 AK310728 U66359	-18679	-	TSC_hg19_v1_chrX_-_48958083 BC069206 NM_007075	-40687	-	AK023344 TSC_hg19_v1_chrX_-_48937565 NM_001029896	-61207	-	BC067800 NM_001099681 NM_001099682 NM_024859 BC027995	20416	+	TSC_hg19_v1_chrX_+_49020239 AK025340 AK094251 NM_001099680	21475	+	NM_002668 TSC_hg19_v1_chrX_+_49028254 L09604 BC109066 AB591027	29484	+	AB209806|GPKOW|27238|G patch domain and KOW motifs##BC000397|GPKOW|27238|G patch domain and KOW motifs##BC003148|GPKOW|27238|G patch domain and KOW motifs##NM_015698|GPKOW|27238|G patch domain and KOW motifs##U66359|GPKOW|27238|G patch domain and KOW motifs##BC069206|WDR45|11152|WD repeat domain 45##NM_007075|WDR45|11152|WD repeat domain 45##AK023344|WDR45|11152|WD repeat domain 45##NM_001029896|WDR45|11152|WD repeat domain 45##BC067800|MAGIX|79917|MAGI family member, X-linked##NM_001099681|MAGIX|79917|MAGI family member, X-linked##NM_001099682|MAGIX|79917|MAGI family member, X-linked##NM_024859|MAGIX|79917|MAGI family member, X-linked##BC027995|MAGIX|79917|MAGI family member, X-linked##AK025340|MAGIX|79917|MAGI family member, X-linked##AK094251|MAGIX|79917|MAGI family member, X-linked##NM_001099680|MAGIX|79917|MAGI family member, X-linked##NM_002668|PLP2|5355|proteolipid protein 2 (colonic epithelium-enriched)##L09604|PLP2|5355|proteolipid protein 2 (colonic epithelium-enriched)##BC109066|PLP2|5355|proteolipid protein 2 (colonic epithelium-enriched)	0.0	
chr12	103899178	103899294	reg1024562.p1	4.186	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	-9490	-	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-547144	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-547715	+	AY311388 AJ295695 NM_017564 AB052958	81825	+	AB032773 TSC_hg19_v1_chr12_-_104234857	335588	-	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	335743	-	AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3	0.0	
chr1	52221316	52221439	reg1034035.p1	4.186	+	TSC_hg19_v1_chr1_+_52195604 AK022554	-25723	+	TSC_hg19_v1_chr1_+_52195549 AK027707 BC025978	-25831	+	TSC_hg19_v1_chr1_+_52195487 NM_148904 NM_148905 NM_148907 AK315167	-25900	+	AY360265 AK311631 NM_001242361	122323	-	TSC_hg19_v1_chr1_-_52344010 AK299271	122657	-	TSC_hg19_v1_chr1_-_52344354 AY049784	122956	-	AK022554|OSBPL9|114883|oxysterol binding protein-like 9##AK027707|OSBPL9|114883|oxysterol binding protein-like 9##BC025978|OSBPL9|114883|oxysterol binding protein-like 9##NM_148904|OSBPL9|114883|oxysterol binding protein-like 9##NM_148905|OSBPL9|114883|oxysterol binding protein-like 9##NM_148907|OSBPL9|114883|oxysterol binding protein-like 9##AK315167|OSBPL9|114883|oxysterol binding protein-like 9##AY360265|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AK311631|NRD1|4898|nardilysin (N-arginine dibasic convertase)##NM_001242361|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AY049784|NRD1|4898|nardilysin (N-arginine dibasic convertase)	0.0	
chr17	3462219	3462400	reg1031481.p2	4.186	+	AJ487035 NM_145068	-1021	-	AF514998 BC104866 BC104868 BC143294 BC143295 BC143299 BC143330 BC143333 BC143334 BC143336 AY118267 AY118268 AK092557 TSC_hg19_v1_chr17_-_3461110	-1239	-	NM_000049 S67156 BC029128 BC010941 CR541908 CU688602 DQ892079 DQ895272	-82935	+	BC132820 BC136633 AJ277028 NM_080706	33837	-	AF196176 NM_080705	36815	-	AJ272063 NM_018727 AF196175	38054	-	AJ487035|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##NM_145068|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##AF514998|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC104866|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC104868|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143294|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143295|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143299|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143330|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143333|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143334|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##BC143336|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##AY118267|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##AY118268|TRPV3|162514|transient receptor potential cation channel, subfamily V, member 3##NM_000049|ASPA|443|aspartoacylase##S67156|ASPA|443|aspartoacylase##BC029128|ASPA|443|aspartoacylase##BC010941|ASPA|443|aspartoacylase##CR541908|ASPA|443|aspartoacylase##DQ892079|ASPA|443|aspartoacylase##DQ895272|ASPA|443|aspartoacylase##BC132820|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##BC136633|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##AJ277028|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##NM_080706|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##AF196176|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##NM_080705|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##AJ272063|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##NM_018727|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1##AF196175|TRPV1|7442|transient receptor potential cation channel, subfamily V, member 1	0.09794	
chr17	7894843	7894915	reg1025853.p1	4.186	+	NM_001037144 NM_053051 AY160226 AY160227 TSC_hg19_v1_chr17_+_7835522 AK293076 AF331638 BC021134 AL833907	-59350	+	AB528455 DQ890860 DQ894015 BC025413 TSC_hg19_v1_chr17_-_7835265 BC032717 AK314038 NM_021210 NM_001166621	-59619	-	AF016411 BC096232 BC096233 BC096234 BC099634 NM_004732	-62127	-	DQ426876 NM_000180 M92432	11072	+	AK298095 NM_001039130 NM_001039131 NM_001141 AK292779 AK300554 BC063647 U78294 BC035217 BC033294 AB590334 DQ891345 EU176579 AF468051 AF468052 AF468053 AF468054	47533	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	65323	+	NM_001037144|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##NM_053051|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160226|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160227|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AK293076|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AF331638|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##BC021134|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AL833907|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##DQ890860|TRAPPC1|58485|trafficking protein particle complex 1##DQ894015|TRAPPC1|58485|trafficking protein particle complex 1##BC025413|TRAPPC1|58485|trafficking protein particle complex 1##BC032717|TRAPPC1|58485|trafficking protein particle complex 1##AK314038|TRAPPC1|58485|trafficking protein particle complex 1##NM_021210|TRAPPC1|58485|trafficking protein particle complex 1##NM_001166621|TRAPPC1|58485|trafficking protein particle complex 1##AF016411|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096232|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096233|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096234|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC099634|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_004732|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_000180|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##M92432|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##AK298095|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039130|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039131|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001141|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK292779|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK300554|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC063647|ALOX15B|247|arachidonate 15-lipoxygenase, type B##U78294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC035217|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC033294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##DQ891345|ALOX15B|247|arachidonate 15-lipoxygenase, type B##EU176579|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468051|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468052|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468053|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468054|ALOX15B|247|arachidonate 15-lipoxygenase, type B	0.0	
chr2	237968147	237968241	reg1021968.p2	4.186	+	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	-489766	+	BC043504 NM_024726 AK294105 BC028699	-552062	-	NM_212556 BX647589	-795200	-	BC036499 NM_006710 NM_198189	25824	+	TSC_hg19_v1_chr2_-_237994424 AK056246	26243	-	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	26326	+	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	0.0	
chr7	69272801	69272938	reg1029526.p2	4.186	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-208281	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-208540	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-209033	+	TSC_hg19_v1_chr7_+_70231164 AK296981	958336	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1324919	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2528909	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.0	
chrX	48791090	48791271	reg1030742.p1	4.186	+	U77735 BC018111 AK312745 TSC_hg19_v1_chrX_-_48776302 AK290931 NM_006875	-14833	-	D84454 NM_001042498	-21946	-	CR450287 D88146 NM_005660 AK225508 AK290284 AK293415 AK293419 AK298484 AK299748 TSC_hg19_v1_chrX_-_48768926 BC035747 NM_001032289 AK292816	-22249	-	TSC_hg19_v1_chrX_-_48814831 BC028225	23625	-	TSC_hg19_v1_chrX_-_48814870 BC009917 NM_001136157 NM_001136158 NM_017602	23694	-	TSC_hg19_v1_chrX_-_48815168 BC098440	23951	-	U77735|PIM2|11040|pim-2 oncogene##BC018111|PIM2|11040|pim-2 oncogene##AK312745|PIM2|11040|pim-2 oncogene##AK290931|PIM2|11040|pim-2 oncogene##NM_006875|PIM2|11040|pim-2 oncogene##D84454|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001042498|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##CR450287|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##D88146|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_005660|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK225508|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK290284|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293415|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293419|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK298484|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK299748|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC035747|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001032289|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK292816|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC028225|OTUD5|55593|OTU domain containing 5##BC009917|OTUD5|55593|OTU domain containing 5##NM_001136157|OTUD5|55593|OTU domain containing 5##NM_001136158|OTUD5|55593|OTU domain containing 5##NM_017602|OTUD5|55593|OTU domain containing 5##BC098440|OTUD5|55593|OTU domain containing 5	0.958087	CTCF.p2:64:0.958
chr10	63747854	63748034	reg1029437.p1	4.185	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-86513	+	NM_032199	-86932	+	BC041932 NM_173554	-325226	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	61152	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	280595	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	386099	+	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365	0.0	
chr16	11392866	11393019	reg1025712.p1	4.185	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-17800	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	-22622	-	NM_021247	-25491	-	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	46352	+	TSC_hg19_v1_chr16_+_11439315 BC013040	46376	+	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	287245	-	BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2##NM_021247|PRM3|58531|protamine 3##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor	0.0	
chr20	42380174	42380355	reg1027251.p2	4.185	+	BC040049 AK058060 NM_001008901 NM_176791	-24661	-	TSC_hg19_v1_chr20_+_42295753 AK303249 AK314791 BC053555 X13293 AB528519 AK223482 DQ893522 DQ895945	-84429	+	NM_002466 TSC_hg19_v1_chr20_+_42295720 BC007585	-84543	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	163223	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	164529	+	NM_001098798	194271	+	BC040049|GTSF1L|149699|gametocyte specific factor 1-like##AK058060|GTSF1L|149699|gametocyte specific factor 1-like##NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like##NM_176791|GTSF1L|149699|gametocyte specific factor 1-like##AK303249|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK314791|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC053555|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##X13293|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK223482|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ893522|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ895945|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_002466|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC007585|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098798|TOX2|84969|TOX high mobility group box family member 2	0.0	
chr20	46924507	46924611	reg1028181.p2	4.185	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-509241	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-509807	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-793875	+	AB037836 TSC_hg19_v1_chr20_-_47444291	519727	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	519880	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	613759	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr3	129047658	129047767	reg1031212.p2	4.185	+	TSC_hg19_v1_chr3_-_129035130 BC000426 NM_006026	-12612	-	TSC_hg19_v1_chr3_+_128997745 BC010125 BC050686 NM_001006109 BC009993	-49900	+	TSC_hg19_v1_chr3_+_128997674 AF201934 NM_020187 BC088363 AK297501 AK309891 AK225264	-50050	+	TSC_hg19_v1_chr3_-_129118263 BC053996 AK093477	70551	-	CU688234 AK127968 BC031104 BC066975 NM_207307	99700	-	AM180876 CR450305 CU680042 BC034463 U56254 U56428 TSC_hg19_v1_chr3_-_129158722 BC011752	111006	-	BC000426|H1FX|8971|H1 histone family, member X##NM_006026|H1FX|8971|H1 histone family, member X##BC010125|C3orf37|56941|chromosome 3 open reading frame 37##BC050686|C3orf37|56941|chromosome 3 open reading frame 37##NM_001006109|C3orf37|56941|chromosome 3 open reading frame 37##BC009993|C3orf37|56941|chromosome 3 open reading frame 37##AF201934|C3orf37|56941|chromosome 3 open reading frame 37##NM_020187|C3orf37|56941|chromosome 3 open reading frame 37##BC088363|C3orf37|56941|chromosome 3 open reading frame 37##AK297501|C3orf37|56941|chromosome 3 open reading frame 37##AK309891|C3orf37|56941|chromosome 3 open reading frame 37##AK225264|C3orf37|56941|chromosome 3 open reading frame 37##BC053996|RPL32P3|132241|ribosomal protein L32 pseudogene 3##AK093477|RPL32P3|132241|ribosomal protein L32 pseudogene 3##AK127968|C3orf25|90288|chromosome 3 open reading frame 25##BC031104|C3orf25|90288|chromosome 3 open reading frame 25##BC066975|C3orf25|90288|chromosome 3 open reading frame 25##NM_207307|C3orf25|90288|chromosome 3 open reading frame 25##AM180876|MBD4|8930|methyl-CpG binding domain protein 4##CR450305|MBD4|8930|methyl-CpG binding domain protein 4##BC034463|MBD4|8930|methyl-CpG binding domain protein 4##BC011752|MBD4|8930|methyl-CpG binding domain protein 4	0.228796	CTCF.p2:-4:0.229
chr5	79552092	79552192	reg1027223.p1	4.185	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	-257	-	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-220978	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-265184	-	NM_032567 AK098575 AK314007 AF333098 BC033798	63673	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	151711	+	AY358256 NM_205548 BC142990 TSC_hg19_v1_chr5_+_79783828 BC131563	231691	+	BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AY358256|FAM151B|167555|family with sequence similarity 151, member B##NM_205548|FAM151B|167555|family with sequence similarity 151, member B##BC142990|FAM151B|167555|family with sequence similarity 151, member B##BC131563|FAM151B|167555|family with sequence similarity 151, member B	0.0	
chr7	75831112	75831228	reg1032260.p2	4.185	+	BC001917 TSC_hg19_v1_chr7_+_75677453 AK316587 DQ893080 DQ896341 AK293460 CR536548	-153705	+	AK095803 AK290779 TSC_hg19_v1_chr7_+_75677402	-153768	+	TSC_hg19_v1_chr7_+_75677368 AF047470 NM_005918	-153792	+	TSC_hg19_v1_chr7_+_75831199 NM_001110199 BC029292	35	+	TSC_hg19_v1_chr7_+_75931989 NM_001540 U90906 BC000510 BC012292 AF086135 X54079 AK296890	100739	+	AK311894 TSC_hg19_v1_chr7_+_75931991 BC012768 BC073768 AB020027 AL050380 DQ891304 DQ893349 DQ894489 DQ896669 AB528488 BT019888 CR407614 CR536489 BC014920	100860	+	BC001917|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK316587|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ893080|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ896341|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK293460|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##CR536548|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK095803|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK290779|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AF047470|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##NM_005918|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##NM_001110199|SRRM3|222183|serine/arginine repetitive matrix 3##BC029292|SRRM3|222183|serine/arginine repetitive matrix 3##NM_001540|HSPB1|3315|heat shock 27kDa protein 1##U90906|HSPB1|3315|heat shock 27kDa protein 1##BC000510|HSPB1|3315|heat shock 27kDa protein 1##BC012292|HSPB1|3315|heat shock 27kDa protein 1##X54079|HSPB1|3315|heat shock 27kDa protein 1##AK296890|HSPB1|3315|heat shock 27kDa protein 1##AK311894|HSPB1|3315|heat shock 27kDa protein 1##BC012768|HSPB1|3315|heat shock 27kDa protein 1##BC073768|HSPB1|3315|heat shock 27kDa protein 1##AB020027|HSPB1|3315|heat shock 27kDa protein 1##AL050380|HSPB1|3315|heat shock 27kDa protein 1##DQ891304|HSPB1|3315|heat shock 27kDa protein 1##DQ893349|HSPB1|3315|heat shock 27kDa protein 1##DQ894489|HSPB1|3315|heat shock 27kDa protein 1##DQ896669|HSPB1|3315|heat shock 27kDa protein 1##BT019888|HSPB1|3315|heat shock 27kDa protein 1##CR407614|HSPB1|3315|heat shock 27kDa protein 1##CR536489|HSPB1|3315|heat shock 27kDa protein 1##BC014920|HSPB1|3315|heat shock 27kDa protein 1	0.696041	CTCF.p2:-31:0.696
chr9	107913430	107913610	reg1035032.p1	4.185	+	NM_005502 TSC_hg19_v1_chr9_-_107690527	-222991	-	AK024328 TSC_hg19_v1_chr9_-_107690437 AF258627	-223040	-	BC146856 TSC_hg19_v1_chr9_-_107690419 AF285167 BC034824 BC141816 BC142693 AK022254	-223136	-	TSC_hg19_v1_chr9_+_108006931 NM_080546	93393	+	TSC_hg19_v1_chr9_+_108006937 AJ272365	93431	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	93547	+	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##NM_080546|SLC44A1|23446|solute carrier family 44, member 1##AJ272365|SLC44A1|23446|solute carrier family 44, member 1##AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1	0.0	
chr9	114658750	114658931	reg1036365.p1	4.185	+	AL833535 NM_173521	-113065	-	BC041858 AK126055 NM_001080551	-137038	-	BC107574 TSC_hg19_v1_chr9_+_114423894 BC010384 BC016319 U31383 BC072671 BC015206 AB463708 AF493877	-234939	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	274	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	627	+	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	278680	-	AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##BC041858|C9orf84|158401|chromosome 9 open reading frame 84##AK126055|C9orf84|158401|chromosome 9 open reading frame 84##NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84##BC107574|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC010384|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC016319|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##U31383|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC072671|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC015206|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##AF493877|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1	0.0	
chr12	24934085	24934221	reg1032453.p2	4.184	+	BC104436 BC104437 TSC_hg19_v1_chr12_-_24737100 AK057456	-197060	-	TSC_hg19_v1_chr12_-_24715349 AB081588 NM_152989 BC060773	-218788	-	BC014929 TSC_hg19_v1_chr12_-_24103967 AK303970	-830192	-	TSC_hg19_v1_chr12_-_25055230 CR749308 BC033864 NM_001178094	121121	-	TSC_hg19_v1_chr12_-_25055966 AK294879 NM_001178093	121834	-	TSC_hg19_v1_chr12_-_25101988 AK299088	167803	-	BC104436|LINC00477|144360|long intergenic non-protein coding RNA 477##BC104437|LINC00477|144360|long intergenic non-protein coding RNA 477##AK057456|LINC00477|144360|long intergenic non-protein coding RNA 477##AB081588|SOX5|6660|SRY (sex determining region Y)-box 5##NM_152989|SOX5|6660|SRY (sex determining region Y)-box 5##BC060773|SOX5|6660|SRY (sex determining region Y)-box 5##BC014929|SOX5|6660|SRY (sex determining region Y)-box 5##AK303970|SOX5|6660|SRY (sex determining region Y)-box 5##CR749308|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BC033864|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178094|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK294879|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178093|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK299088|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic	0.215695	CTCF.p2:4:0.216
chr12	27397390	27397492	reg1030077.p1	4.184	+	TSC_hg19_v1_chr12_+_27397225 AK304755	-216	+	TSC_hg19_v1_chr12_+_27397187 AK291055	-254	+	NM_015000 BC028603 TSC_hg19_v1_chr12_+_27397168	-317	+	TSC_hg19_v1_chr12_+_27485806 AF256215 NM_001248002 NM_001248003 NM_001248004 NM_001248005 NM_020183 AK296706 AF246960 AF246961 AF246962 AF246963 BC125062 BC125061	88438	+	BC043511 TSC_hg19_v1_chr12_-_27599649	202163	-	NM_001145010	222301	+	AK304755|STK38L|23012|serine/threonine kinase 38 like##AK291055|STK38L|23012|serine/threonine kinase 38 like##NM_015000|STK38L|23012|serine/threonine kinase 38 like##BC028603|STK38L|23012|serine/threonine kinase 38 like##AF256215|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248002|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248003|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248004|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001248005|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_020183|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AK296706|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246960|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246961|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246962|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##AF246963|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##BC125062|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##BC125061|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##BC043511|ARNTL2|56938|aryl hydrocarbon receptor nuclear translocator-like 2##NM_001145010|C12orf70|341346|chromosome 12 open reading frame 70	0.030206	
chr17	59660733	59660851	reg1032040.p2	4.184	+	AF188703 NM_018488 BC136403 BC144062 AB464284	-126964	+	BC142620 TSC_hg19_v1_chr17_+_59529788	-131006	+	BC046200 NM_203425	-171681	+	CU687600 BC062710 NM_199290 TSC_hg19_v1_chr17_-_59668583	7770	-	BC101472 BC101474 AF360549 TSC_hg19_v1_chr17_-_59940873 NM_032043	280002	-	TSC_hg19_v1_chr17_-_60005339 AB033113 AK308307 AK299032 AL136800 NM_020748	344550	-	AF188703|TBX4|9496|T-box 4##NM_018488|TBX4|9496|T-box 4##BC136403|TBX4|9496|T-box 4##BC144062|TBX4|9496|T-box 4##BC142620|TBX4|9496|T-box 4##BC046200|C17orf82|388407|chromosome 17 open reading frame 82##NM_203425|C17orf82|388407|chromosome 17 open reading frame 82##BC062710|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##NM_199290|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##BC101472|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##BC101474|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AF360549|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_032043|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AB033113|INTS2|57508|integrator complex subunit 2##AK308307|INTS2|57508|integrator complex subunit 2##AK299032|INTS2|57508|integrator complex subunit 2##AL136800|INTS2|57508|integrator complex subunit 2##NM_020748|INTS2|57508|integrator complex subunit 2	0.0	
chr19	13193326	13193462	reg1026829.p1	4.184	+	HQ258405 TSC_hg19_v1_chr19_+_13135832 FJ861276 U07811	-57560	+	TSC_hg19_v1_chr19_+_13135745 L31881 BC117113 BC117115	-57634	+	TSC_hg19_v1_chr19_+_13135426 BX537794 AK295290	-57997	+	TSC_hg19_v1_chr19_+_13205957 BC036885	12596	+	TSC_hg19_v1_chr19_-_13213530 AK311530 M22637	20132	-	TSC_hg19_v1_chr19_-_13213673 BC002796	20303	-	HQ258405|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##FJ861276|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U07811|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC036885|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##M22637|LYL1|4066|lymphoblastic leukemia derived sequence 1##BC002796|LYL1|4066|lymphoblastic leukemia derived sequence 1	0.0491	
chr19	18118988	18119121	reg1030752.p2	4.184	+	TSC_hg19_v1_chr19_+_18118978 AF193051 NM_015683 AK000689 AK128588 BC022516 AK314657 AB529119	-36	+	TSC_hg19_v1_chr19_+_18111932 NM_001025604 AK127940	-7104	+	NM_002248 U69883	-56944	+	EU832463 EU832545 BC137404 BC137406 NM_005535 NM_153701 U03187 BC029121 TSC_hg19_v1_chr19_-_18197721 AK225919 AK290423	78678	-	TSC_hg19_v1_chr19_+_18208608 AB527184 NM_015016 AB011133	89555	+	BC063240 TSC_hg19_v1_chr19_+_18263972	144927	+	AF193051|ARRDC2|27106|arrestin domain containing 2##NM_015683|ARRDC2|27106|arrestin domain containing 2##AK000689|ARRDC2|27106|arrestin domain containing 2##AK128588|ARRDC2|27106|arrestin domain containing 2##BC022516|ARRDC2|27106|arrestin domain containing 2##AK314657|ARRDC2|27106|arrestin domain containing 2##NM_001025604|ARRDC2|27106|arrestin domain containing 2##AK127940|ARRDC2|27106|arrestin domain containing 2##NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##EU832463|IL12RB1|3594|interleukin 12 receptor, beta 1##EU832545|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137404|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137406|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_005535|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_153701|IL12RB1|3594|interleukin 12 receptor, beta 1##U03187|IL12RB1|3594|interleukin 12 receptor, beta 1##BC029121|IL12RB1|3594|interleukin 12 receptor, beta 1##AK225919|IL12RB1|3594|interleukin 12 receptor, beta 1##AK290423|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_015016|MAST3|23031|microtubule associated serine/threonine kinase 3##AB011133|MAST3|23031|microtubule associated serine/threonine kinase 3	0.0	
chr22	20203419	20203485	reg1043196.p2	4.184	+	NM_001243537	-66022	-	TSC_hg19_v1_chr22_+_20119357 AY894890 BC053544 NM_001185024 NM_013373 AK131238	-84019	+	TSC_hg19_v1_chr22_+_20105145 AB587487 CU013156 CU013444	-98295	+	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	52315	-	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	104117	-	NM_001242313	174216	+	NM_001243537|LOC388849|388849|uncharacterized LOC388849##AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8##BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8##AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8##CU013156|RANBP1|5902|RAN binding protein 1##CU013444|RANBP1|5902|RAN binding protein 1##AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_001242313|TMEM191B|728229|transmembrane protein 191B	0.010717	
chr3	150548223	150548362	reg1024519.p2	4.184	+	TSC_hg19_v1_chr3_-_150481278 U76248 NM_005067	-67170	-	TSC_hg19_v1_chr3_-_150480936 BC013082	-67362	-	TSC_hg19_v1_chr3_-_150480902 AK223565	-67393	-	AF388366 AF388368 NM_052995	113730	-	AF482697 NM_001195794 NM_174878	142493	-	TSC_hg19_v1_chr3_+_150803504 AK128165	255213	+	U76248|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##NM_005067|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##BC013082|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##AK223565|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##AF388366|CLRN1|7401|clarin 1##AF388368|CLRN1|7401|clarin 1##NM_052995|CLRN1|7401|clarin 1##AF482697|CLRN1|7401|clarin 1##NM_001195794|CLRN1|7401|clarin 1##NM_174878|CLRN1|7401|clarin 1##AK128165|MED12L|116931|mediator complex subunit 12-like	0.0	
chr10	115870448	115870568	reg1040609.p1	4.183	+	NM_000684 J03019	-66699	+	TSC_hg19_v1_chr10_+_115614419 NM_198514 AK090631 AX746547	-256089	+	D42045 NM_014881 AK307187	-256592	-	TSC_hg19_v1_chr10_-_115933963 BC100670 BC103499 BC103504 BC105632 BC152306 BC107430 BC070368 BX537964 AK307517 AK092620 AX747632 BC020842 BC030557	63424	-	NM_018017	63855	-	AK122916 AL833340 NM_198795 BX648664 BC063133	68563	+	NM_000684|ADRB1|153|adrenergic, beta-1-, receptor##J03019|ADRB1|153|adrenergic, beta-1-, receptor##NM_198514|NHLRC2|374354|NHL repeat containing 2##AK090631|NHLRC2|374354|NHL repeat containing 2##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A##BC100670|C10orf118|55088|chromosome 10 open reading frame 118##BC103499|C10orf118|55088|chromosome 10 open reading frame 118##BC103504|C10orf118|55088|chromosome 10 open reading frame 118##BC105632|C10orf118|55088|chromosome 10 open reading frame 118##BC152306|C10orf118|55088|chromosome 10 open reading frame 118##BC107430|C10orf118|55088|chromosome 10 open reading frame 118##BC070368|C10orf118|55088|chromosome 10 open reading frame 118##BX537964|C10orf118|55088|chromosome 10 open reading frame 118##AK307517|C10orf118|55088|chromosome 10 open reading frame 118##AK092620|C10orf118|55088|chromosome 10 open reading frame 118##BC020842|C10orf118|55088|chromosome 10 open reading frame 118##BC030557|C10orf118|55088|chromosome 10 open reading frame 118##NM_018017|C10orf118|55088|chromosome 10 open reading frame 118##AK122916|TDRD1|56165|tudor domain containing 1##AL833340|TDRD1|56165|tudor domain containing 1##NM_198795|TDRD1|56165|tudor domain containing 1##BX648664|TDRD1|56165|tudor domain containing 1##BC063133|TDRD1|56165|tudor domain containing 1	0.755151	CTCF.p2:17:0.736
chr12	13128732	13128856	reg1033553.p1	4.183	+	AB099817 AF209923 BC069341 BC107077 BC107078 NM_018654	-25477	-	TSC_hg19_v1_chr12_+_13044495 AF506289 AF095448 BC003665 AK291171	-84269	+	AK001761 TSC_hg19_v1_chr12_+_13044469	-84383	+	AF167473 BT007294 DQ892338 DQ895543 BC016277 AF117615 TSC_hg19_v1_chr12_-_13153173	24316	-	TSC_hg19_v1_chr12_-_13153227 AK289877 NM_015987	24442	-	TSC_hg19_v1_chr12_+_13153363 AK125676 AK125093	24611	+	AB099817|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##AF209923|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##BC069341|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##BC107077|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##BC107078|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##NM_018654|GPRC5D|55507|G protein-coupled receptor, family C, group 5, member D##AF506289|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AF095448|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##BC003665|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AK291171|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AK001761|GPRC5A|9052|G protein-coupled receptor, family C, group 5, member A##AF167473|HEBP1|50865|heme binding protein 1##BT007294|HEBP1|50865|heme binding protein 1##DQ892338|HEBP1|50865|heme binding protein 1##DQ895543|HEBP1|50865|heme binding protein 1##BC016277|HEBP1|50865|heme binding protein 1##AF117615|HEBP1|50865|heme binding protein 1##AK289877|HEBP1|50865|heme binding protein 1##NM_015987|HEBP1|50865|heme binding protein 1##AK125093|HTR7P1|93164|5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1	0.432014	CTCF.p2:1:0.432
chr17	58217296	58217404	reg1033027.p1	4.183	+	TSC_hg19_v1_chr17_-_58213006 AK311448	-4339	-	TSC_hg19_v1_chr17_-_58156283 AK127708 AK314655 BC119771 BC119813 BX640819 BX640831 CR627418 NM_022070 AF349752	-60996	-	BC006971 TSC_hg19_v1_chr17_-_58042099 AK294806 AK296197 NM_016125	-175243	-	TSC_hg19_v1_chr17_+_58227302 BC057792 NM_000717 AK289715 AK298710	9940	+	TSC_hg19_v1_chr17_+_58227333 BC069649 M83670 BC074768 CR541766 CU691238	10012	+	CU691084 TSC_hg19_v1_chr17_-_58469313 BC054344	251968	-	AK127708|HEATR6|63897|HEAT repeat containing 6##AK314655|HEATR6|63897|HEAT repeat containing 6##BC119771|HEATR6|63897|HEAT repeat containing 6##BC119813|HEATR6|63897|HEAT repeat containing 6##BX640819|HEATR6|63897|HEAT repeat containing 6##BX640831|HEATR6|63897|HEAT repeat containing 6##CR627418|HEATR6|63897|HEAT repeat containing 6##NM_022070|HEATR6|63897|HEAT repeat containing 6##AF349752|HEATR6|63897|HEAT repeat containing 6##BC006971|RNFT1|51136|ring finger protein, transmembrane 1##AK294806|RNFT1|51136|ring finger protein, transmembrane 1##AK296197|RNFT1|51136|ring finger protein, transmembrane 1##NM_016125|RNFT1|51136|ring finger protein, transmembrane 1##BC057792|CA4|762|carbonic anhydrase IV##NM_000717|CA4|762|carbonic anhydrase IV##AK289715|CA4|762|carbonic anhydrase IV##AK298710|CA4|762|carbonic anhydrase IV##BC069649|CA4|762|carbonic anhydrase IV##M83670|CA4|762|carbonic anhydrase IV##BC074768|CA4|762|carbonic anhydrase IV##CR541766|CA4|762|carbonic anhydrase IV##BC054344|USP32|84669|ubiquitin specific peptidase 32	0.860577	CTCF.p2:14:0.861
chr19	55392881	55392963	reg1032271.p2	4.183	+	NM_002000 NM_133269 NM_133271 NM_133272 NM_133273 NM_133274 NM_133277 NM_133278 NM_133279 AK290922 BC027953 U56236 U56237 U43677 U43774 DQ890935 DQ894098 AB590300 CU693344 D87853 D87854 D87855 D87856 D87857 D87858 D87859 D87860 D87861 D87862 DQ075334 DQ075335 DQ075336 DQ075337 DQ075338 DQ075339 S82919 X92558 X92559 X92560 X92561 X92562	-7276	+	AF262967 AF263617 NM_001242867 NM_006737 X93595 BC105678 BC107951 L41270 AY366256 L76665 L76666 U30272 AJ276125 X94373 AY789067 AY789068 AY789070 EF582384 X93596 X94374	-31009	+	BC144566 BC171788 X94609 AF002255 NM_012314 AY388472 AY366245 BC127084 BC096694 BC101977 BC103693 L76671 AY366246 AB590477 AY102623 U24077 AY789064	-48740	+	AJ001383 NM_001145457 NM_001145458 NM_001242356 NM_001242357 NM_004829 BC030265 BC064806 AJ006121 AJ006122 AJ006123 AY346373 CU687946	24604	+	BC109124 BC109125 AY154462 NM_001127255 NM_139176 NM_206828 AK298630	65954	-	NM_001174081	83729	+	NM_002000|FCAR|2204|Fc fragment of IgA, receptor for##NM_133269|FCAR|2204|Fc fragment of IgA, receptor for##NM_133271|FCAR|2204|Fc fragment of IgA, receptor for##NM_133272|FCAR|2204|Fc fragment of IgA, receptor for##NM_133273|FCAR|2204|Fc fragment of IgA, receptor for##NM_133274|FCAR|2204|Fc fragment of IgA, receptor for##NM_133277|FCAR|2204|Fc fragment of IgA, receptor for##NM_133278|FCAR|2204|Fc fragment of IgA, receptor for##NM_133279|FCAR|2204|Fc fragment of IgA, receptor for##AK290922|FCAR|2204|Fc fragment of IgA, receptor for##BC027953|FCAR|2204|Fc fragment of IgA, receptor for##U56236|FCAR|2204|Fc fragment of IgA, receptor for##U56237|FCAR|2204|Fc fragment of IgA, receptor for##U43677|FCAR|2204|Fc fragment of IgA, receptor for##U43774|FCAR|2204|Fc fragment of IgA, receptor for##DQ890935|FCAR|2204|Fc fragment of IgA, receptor for##DQ894098|FCAR|2204|Fc fragment of IgA, receptor for##D87853|FCAR|2204|Fc fragment of IgA, receptor for##D87854|FCAR|2204|Fc fragment of IgA, receptor for##D87855|FCAR|2204|Fc fragment of IgA, receptor for##D87856|FCAR|2204|Fc fragment of IgA, receptor for##D87857|FCAR|2204|Fc fragment of IgA, receptor for##D87858|FCAR|2204|Fc fragment of IgA, receptor for##D87859|FCAR|2204|Fc fragment of IgA, receptor for##D87860|FCAR|2204|Fc fragment of IgA, receptor for##D87861|FCAR|2204|Fc fragment of IgA, receptor for##D87862|FCAR|2204|Fc fragment of IgA, receptor for##DQ075334|FCAR|2204|Fc fragment of IgA, receptor for##DQ075335|FCAR|2204|Fc fragment of IgA, receptor for##DQ075336|FCAR|2204|Fc fragment of IgA, receptor for##DQ075337|FCAR|2204|Fc fragment of IgA, receptor for##DQ075338|FCAR|2204|Fc fragment of IgA, receptor for##DQ075339|FCAR|2204|Fc fragment of IgA, receptor for##S82919|FCAR|2204|Fc fragment of IgA, receptor for##X92558|FCAR|2204|Fc fragment of IgA, receptor for##X92559|FCAR|2204|Fc fragment of IgA, receptor for##X92560|FCAR|2204|Fc fragment of IgA, receptor for##X92561|FCAR|2204|Fc fragment of IgA, receptor for##X92562|FCAR|2204|Fc fragment of IgA, receptor for##AF262967|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AF263617|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##NM_001242867|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##NM_006737|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##X93595|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##BC105678|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##BC107951|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##L41270|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AY366256|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##L76665|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##L76666|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##U30272|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AJ276125|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##X94373|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AY789067|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AY789068|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##AY789070|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##EF582384|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##X93596|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##X94374|KIR3DL2|3812|killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2##BC144566|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##BC171788|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##X94609|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AF002255|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##NM_012314|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AY388472|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AY366245|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##BC127084|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##BC096694|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##BC101977|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##BC103693|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##L76671|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AY366246|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AY102623|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##U24077|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AY789064|KIR2DS4|3809|killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 4##AJ001383|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_001145457|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_001145458|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_001242356|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_001242357|NCR1|9437|natural cytotoxicity triggering receptor 1##NM_004829|NCR1|9437|natural cytotoxicity triggering receptor 1##BC064806|NCR1|9437|natural cytotoxicity triggering receptor 1##AJ006121|NCR1|9437|natural cytotoxicity triggering receptor 1##AJ006122|NCR1|9437|natural cytotoxicity triggering receptor 1##AJ006123|NCR1|9437|natural cytotoxicity triggering receptor 1##AY346373|NCR1|9437|natural cytotoxicity triggering receptor 1##BC109124|NLRP7|199713|NLR family, pyrin domain containing 7##BC109125|NLRP7|199713|NLR family, pyrin domain containing 7##AY154462|NLRP7|199713|NLR family, pyrin domain containing 7##NM_001127255|NLRP7|199713|NLR family, pyrin domain containing 7##NM_139176|NLRP7|199713|NLR family, pyrin domain containing 7##NM_206828|NLRP7|199713|NLR family, pyrin domain containing 7##AK298630|NLRP7|199713|NLR family, pyrin domain containing 7##NM_001174081|NLRP2|55655|NLR family, pyrin domain containing 2	0.216735	
chr5	180843199	180843292	reg1030274.p1	4.183	+	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-48968	+	TSC_hg19_v1_chr5_+_180688213 BC016291	-155018	+	AK054802 TSC_hg19_v1_chr5_-_180688115 BC007372 NM_032765 AB209243	-155120	-	None	None	None	None	None	None	None	None	None	BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##AK054802|TRIM52|84851|tripartite motif containing 52##BC007372|TRIM52|84851|tripartite motif containing 52##NM_032765|TRIM52|84851|tripartite motif containing 52##AB209243|TRIM52|84851|tripartite motif containing 52	0.168637	
chr6	364729	364839	reg1035152.p1	4.183	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-72287	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-72699	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	26980	+	AF508547 BC101697 BC101699 NM_148959	292169	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	328306	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chr7	124496476	124496565	reg1030836.p2	4.183	+	BC130600 BC130604 NM_001024603	-65718	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	-90724	-	AF502281 CU691802 AB464545 AF017262 TSC_hg19_v1_chr7_-_124405121	-91445	-	NM_001042594 NM_015450	73516	-	NM_000845	2387048	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	2395845	-	BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##AF502281|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##AF017262|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_001042594|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_015450|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8	0.958723	CTCF.p2:12:0.959
chr7	993210	993372	reg1030790.p2	4.183	+	AK300644 AK300859 TSC_hg19_v1_chr7_-_960513	-32777	-	TSC_hg19_v1_chr7_+_916249 BC003550 AK023560 AF132954	-77021	+	TSC_hg19_v1_chr7_+_916188 NM_015949	-77088	+	TSC_hg19_v1_chr7_-_994129 AB587419 BC033747	824	-	TSC_hg19_v1_chr7_-_994317 NM_006869	1022	-	TSC_hg19_v1_chr7_-_994377 AJ006422	1172	-	AK300644|ADAP1|11033|ArfGAP with dual PH domains 1##AK300859|ADAP1|11033|ArfGAP with dual PH domains 1##BC003550|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK023560|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AF132954|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##NM_015949|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##BC033747|ADAP1|11033|ArfGAP with dual PH domains 1##NM_006869|ADAP1|11033|ArfGAP with dual PH domains 1##AJ006422|ADAP1|11033|ArfGAP with dual PH domains 1	0.0	
chr8	97239575	97239695	reg1034310.p1	4.183	+	BC127948 BC127947 AJ537424 NM_001001557	-66654	-	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	-958170	-	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	-958584	+	CR542176 CR542196 TSC_hg19_v1_chr8_-_97247774 AK307085 NM_001199975 BC041005 AK295007 AK311756 M22348 X13585 M26700 BC005230 NM_006294	8174	-	BC012995 NM_015942 TSC_hg19_v1_chr8_-_97273837 AK309002	34182	-	TSC_hg19_v1_chr8_+_97274125 AK293036	34483	+	BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6##BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_001199975|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC012995|MTERFD1|51001|MTERF domain containing 1##NM_015942|MTERFD1|51001|MTERF domain containing 1##AK309002|MTERFD1|51001|MTERF domain containing 1##AK293036|PTDSS1|9791|phosphatidylserine synthase 1	0.996566	CTCF.p2:10:0.997
chr9	130478090	130478270	reg1029488.p2	4.183	+	HQ257888 TSC_hg19_v1_chr9_-_130477940 BC032117 BC047012 NM_001002913	-238	-	AK094948 NM_001012502 BC141809	-8898	+	TSC_hg19_v1_chr9_+_130374555 NM_001032221 NM_003165 AK295154 AK293984 AK295802 AF004562 AF004563 BC015749 Y12723 D63851 DQ895426 EU176334 CU677423	-103607	+	AK294862 BC031281 AK057342 AK302422 AK302737 NM_144965	169	+	TSC_hg19_v1_chr9_-_130497605 BC080527 AK027677 BC100907 BC100908 BC100909 BC100910 AK075520 AK055034 AK092388 AX747514 AY358180 BC062340	19398	-	TSC_hg19_v1_chr9_-_130497669 NM_001085347 NM_001134430 NM_001134431 NM_001252018 NM_001252021 NM_001252023 NM_130459	19480	-	HQ257888|PTRH1|138428|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)##BC047012|PTRH1|138428|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)##NM_001002913|PTRH1|138428|peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)##AK094948|C9orf117|286207|chromosome 9 open reading frame 117##NM_001012502|C9orf117|286207|chromosome 9 open reading frame 117##BC141809|C9orf117|286207|chromosome 9 open reading frame 117##NM_001032221|STXBP1|6812|syntaxin binding protein 1##NM_003165|STXBP1|6812|syntaxin binding protein 1##AK295154|STXBP1|6812|syntaxin binding protein 1##AK293984|STXBP1|6812|syntaxin binding protein 1##AK295802|STXBP1|6812|syntaxin binding protein 1##AF004562|STXBP1|6812|syntaxin binding protein 1##AF004563|STXBP1|6812|syntaxin binding protein 1##BC015749|STXBP1|6812|syntaxin binding protein 1##Y12723|STXBP1|6812|syntaxin binding protein 1##D63851|STXBP1|6812|syntaxin binding protein 1##DQ895426|STXBP1|6812|syntaxin binding protein 1##EU176334|STXBP1|6812|syntaxin binding protein 1##AK294862|TTC16|158248|tetratricopeptide repeat domain 16##BC031281|TTC16|158248|tetratricopeptide repeat domain 16##AK057342|TTC16|158248|tetratricopeptide repeat domain 16##AK302422|TTC16|158248|tetratricopeptide repeat domain 16##AK302737|TTC16|158248|tetratricopeptide repeat domain 16##NM_144965|TTC16|158248|tetratricopeptide repeat domain 16##BC080527|TOR2A|27433|torsin family 2, member A##AK027677|TOR2A|27433|torsin family 2, member A##BC100907|TOR2A|27433|torsin family 2, member A##BC100908|TOR2A|27433|torsin family 2, member A##BC100909|TOR2A|27433|torsin family 2, member A##BC100910|TOR2A|27433|torsin family 2, member A##AK075520|TOR2A|27433|torsin family 2, member A##AK055034|TOR2A|27433|torsin family 2, member A##AK092388|TOR2A|27433|torsin family 2, member A##AY358180|TOR2A|27433|torsin family 2, member A##BC062340|TOR2A|27433|torsin family 2, member A##NM_001085347|TOR2A|27433|torsin family 2, member A##NM_001134430|TOR2A|27433|torsin family 2, member A##NM_001134431|TOR2A|27433|torsin family 2, member A##NM_001252018|TOR2A|27433|torsin family 2, member A##NM_001252021|TOR2A|27433|torsin family 2, member A##NM_001252023|TOR2A|27433|torsin family 2, member A##NM_130459|TOR2A|27433|torsin family 2, member A	0.0	
chr12	105446776	105446937	reg1002936.p1	4.182	+	TSC_hg19_v1_chr12_+_105380115 BC032326 CU689336 DQ891649 DQ894838	-66735	+	TSC_hg19_v1_chr12_+_105380107 NM_152318	-66766	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	-124593	-	TSC_hg19_v1_chr12_-_105478356 EU832777 GQ129303 AK095827 AK300373 BC103934 BC103935 NM_001034173	31459	-	BC032033 TSC_hg19_v1_chr12_-_105501422	54560	-	TSC_hg19_v1_chr12_+_105501508 AK001657 NM_015275 AB028956 AK001728	54631	+	BC032326|C12orf45|121053|chromosome 12 open reading frame 45##DQ891649|C12orf45|121053|chromosome 12 open reading frame 45##DQ894838|C12orf45|121053|chromosome 12 open reading frame 45##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##EU832777|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##GQ129303|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##AK095827|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##AK300373|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##BC103934|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##BC103935|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##NM_001034173|ALDH1L2|160428|aldehyde dehydrogenase 1 family, member L2##BC032033|LOC414300|414300|uncharacterized LOC414300##AK001657|KIAA1033|23325|KIAA1033##NM_015275|KIAA1033|23325|KIAA1033##AB028956|KIAA1033|23325|KIAA1033##AK001728|KIAA1033|23325|KIAA1033	0.0	
chr12	40352326	40352418	reg1032596.p1	4.182	+	BC038754 NM_001031748 BC048120 AK097445	-332377	+	AK314254 NM_005164	-338530	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	-515373	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	147317	-	TSC_hg19_v1_chr12_-_40499870 BC047507	147500	-	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	266487	+	BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2	0.993023	CTCF.p2:-3:0.993
chr13	76210636	76210812	reg1030912.p1	4.182	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-254	+	AF330045 NM_005358	-16155	+	TSC_hg19_v1_chr13_+_76123890 AK313665 BC018125 NM_006002 M30496 CU676190 BT019359 CR456855	-86800	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	124116	+	BC013764 TSC_hg19_v1_chr13_-_77460431	1249676	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	1249883	-	AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##AK313665|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BC018125|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_006002|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##M30496|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BT019359|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##CR456855|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12	0.0	
chr14	31553782	31553910	reg1027370.p2	4.182	+	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	-58276	-	NM_001128126 NM_007077	-59164	+	TSC_hg19_v1_chr14_+_31343764 NM_001135058 NM_004086 AY358900 AF006740 AK292724 BC000640 BC007230 BC018827	-210128	+	TSC_hg19_v1_chr14_-_31676690 NM_015382	122839	-	TSC_hg19_v1_chr14_-_31676920 BC016947	123089	-	BC062720 TSC_hg19_v1_chr14_-_31889757 NM_015473	335915	-	BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3##NM_001128126|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##NM_007077|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##NM_001135058|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_004086|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AY358900|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AF006740|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AK292724|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC000640|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC007230|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC018827|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_015382|HECTD1|25831|HECT domain containing 1##BC062720|HEATR5A|25938|HEAT repeat containing 5A##NM_015473|HEATR5A|25938|HEAT repeat containing 5A	0.315645	
chr16	68504476	68504657	reg1035102.p1	4.182	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	-22085	-	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	-159607	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	-159740	-	TSC_hg19_v1_chr16_+_68564035 BC040871	59467	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	68632	+	NM_133458	69094	+	AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)##NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)	0.0	
chr17	17627743	17627921	reg1027527.p1	4.182	+	TSC_hg19_v1_chr17_+_17608164 AF147359	-19634	+	TSC_hg19_v1_chr17_+_17584772 AB058723 AY172136 NM_030665	-43047	+	TSC_hg19_v1_chr17_-_17495007 CU690728 AF044214 AF113126 BC000557 BC050593 NM_148172 AK302251	-132857	-	AB373959 TSC_hg19_v1_chr17_-_17726919 S66167 AK091131 AK293795 AK294800 AK297113	99072	-	TSC_hg19_v1_chr17_-_17740301 U00968 BC063281	112463	-	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	112492	-	AB058723|RAI1|10743|retinoic acid induced 1##AY172136|RAI1|10743|retinoic acid induced 1##NM_030665|RAI1|10743|retinoic acid induced 1##AF044214|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AF113126|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC000557|PEMT|10400|phosphatidylethanolamine N-methyltransferase##BC050593|PEMT|10400|phosphatidylethanolamine N-methyltransferase##NM_148172|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AK302251|PEMT|10400|phosphatidylethanolamine N-methyltransferase##AB373959|SREBF1|6720|sterol regulatory element binding transcription factor 1##S66167|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK091131|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK293795|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK294800|SREBF1|6720|sterol regulatory element binding transcription factor 1##AK297113|SREBF1|6720|sterol regulatory element binding transcription factor 1##U00968|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC063281|SREBF1|6720|sterol regulatory element binding transcription factor 1##BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1	0.0	
chr20	11079710	11079793	reg1034698.p1	4.182	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-425182	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	-425547	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-663775	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	791698	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	818806	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	1909890	+	BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3	0.931917	CTCF.p2:-13:0.932
chr22	22337179	22337284	reg1033512.p2	4.182	+	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	-45	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	-84	-	TSC_hg19_v1_chr22_-_22307213 AK291628 NM_014634	-30000	-	TSC_hg19_v1_chr22_+_22385369 AF026922	48134	+	X02422 TSC_hg19_v1_chr22_+_22550141	212898	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	212947	+	AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##AK291628|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##NM_014634|PPM1F|9647|protein phosphatase, Mg2+/Mn2+ dependent, 1F##BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57	0.0	
chr22	41487345	41487448	reg1029937.p2	4.182	+	TSC_hg19_v1_chr22_+_41347389 BC017370 CR456560 AK315722 AF140598 BC001466 AB590096 AF142059 CU013160 CU013448 CU674722 AF085906 AY099360	-139990	+	TSC_hg19_v1_chr22_+_41347364 NM_014248	-140048	+	AB528124 CU013018 CU013306 CR456468 BC112135 AF085232 NM_145174	-229333	-	TSC_hg19_v1_chr22_+_41487787 U01877	394	+	TSC_hg19_v1_chr22_+_41488610 NM_001429 BC053889	1230	+	TSC_hg19_v1_chr22_-_41593483 BC040700	106093	-	BC017370|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CR456560|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AK315722|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF140598|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##BC001466|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF142059|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CU013160|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CU013448|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF085906|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AY099360|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##NM_014248|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CU013018|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##CU013306|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##CR456468|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##BC112135|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##AF085232|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##NM_145174|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##U01877|EP300|2033|E1A binding protein p300##NM_001429|EP300|2033|E1A binding protein p300##BC053889|EP300|2033|E1A binding protein p300	0.0	
chr3	51307058	51307172	reg1033953.p1	4.182	+	AY254099 NM_004947 AY145303	-594433	+	TSC_hg19_v1_chr3_+_50654932 AK313565 U43784 AB528893 EU832627 EU832702 CU675717 AB451303 AB451434	-652183	+	BC001662 BC010407 TSC_hg19_v1_chr3_+_50654611 BC007591 U09578	-652488	+	NM_006010 TSC_hg19_v1_chr3_+_51422691	115576	+	TSC_hg19_v1_chr3_+_51422721 BC113588 BC113590 AK292243 BC007282 BT007110 EU832655 EU832733 BC033055	115666	+	NM_013286 TSC_hg19_v1_chr3_+_51428706	121587	+	AY254099|DOCK3|1795|dedicator of cytokinesis 3##NM_004947|DOCK3|1795|dedicator of cytokinesis 3##AY145303|DOCK3|1795|dedicator of cytokinesis 3##AK313565|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U43784|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832627|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832702|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451303|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451434|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC001662|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC010407|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC007591|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U09578|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##NM_006010|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113588|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113590|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AK292243|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC007282|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BT007110|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832655|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832733|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC033055|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##NM_013286|RBM15B|29890|RNA binding motif protein 15B	0.851155	CTCF.p2:-9:0.851
chrX	115075454	115075577	reg1033401.p1	4.182	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-247647	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-278473	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-279909	+	BC003645 TSC_hg19_v1_chrX_-_115085443	9924	-	AK313927 NM_000686 X87723 U16957	226480	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	492252	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.4893	CTCF.p2:-20:0.489
chr10	109964136	109964251	reg1008859.p1	4.181	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-1039817	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-1505134	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-3563148	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	1719016	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	1719084	-	NM_019903 AB209810 BC057285	1801588	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.0	
chr10	65579662	65579766	reg1037329.p2	4.181	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-298473	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-298552	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-298599	+	NM_178011 BX640611 AY358315 BC111492	3106101	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	3845682	-	AF091606 AK313882 NM_013266	3876223	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.047156	
chr10	74015029	74015148	reg1027549.p1	4.181	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-38977	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-39300	+	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	-39324	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	18736	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	99590	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	99838	-	AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	0.0	
chr10	76771816	76771894	reg1025721.p4	4.181	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-185501	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-835268	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-835325	+	AY686755 NM_001003892 BC137321 BC137322	46450	-	AB027004 AB103375 NM_016364	87392	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	97059	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr11	127100166	127100347	reg1033699.p1	4.181	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-226951	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-229531	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-229596	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	1291707	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	1291878	-	BX640634 NM_001143820	1357196	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.0	
chr11	85405542	85405655	reg1033678.p1	4.181	+	BC044814 AK095478 NM_152723	-8331	-	TSC_hg19_v1_chr11_-_85376174 BC060807 NM_001039618	-29406	-	TSC_hg19_v1_chr11_-_85376147 AF039942	-29491	-	NM_032379	20192	-	BC068495 AK298604 AK074737 NM_206929 AK092121	24565	-	NM_001162952 NM_206930	24784	-	BC044814|CCDC89|220388|coiled-coil domain containing 89##AK095478|CCDC89|220388|coiled-coil domain containing 89##NM_152723|CCDC89|220388|coiled-coil domain containing 89##BC060807|CREBZF|58487|CREB/ATF bZIP transcription factor##NM_001039618|CREBZF|58487|CREB/ATF bZIP transcription factor##AF039942|CREBZF|58487|CREB/ATF bZIP transcription factor##NM_032379|SYTL2|54843|synaptotagmin-like 2##BC068495|SYTL2|54843|synaptotagmin-like 2##AK298604|SYTL2|54843|synaptotagmin-like 2##AK074737|SYTL2|54843|synaptotagmin-like 2##NM_206929|SYTL2|54843|synaptotagmin-like 2##AK092121|SYTL2|54843|synaptotagmin-like 2##NM_001162952|SYTL2|54843|synaptotagmin-like 2##NM_206930|SYTL2|54843|synaptotagmin-like 2	0.994726	CTCF.p2:15:0.995
chr20	49126901	49126995	reg1018738.p2	4.181	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-16	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-29	+	TSC_hg19_v1_chr20_+_49126916 AK316563	-35	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	57	+	AK056792 NM_080829	126477	-	TSC_hg19_v1_chr20_-_49308074 AK124347	181129	-	BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK316563|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C	0.0	
chr4	170290944	170291089	reg1032615.p1	4.181	+	TSC_hg19_v1_chr4_-_170192202 NM_020870	-98796	-	AK021429 TSC_hg19_v1_chr4_-_170192108	-98909	-	TSC_hg19_v1_chr4_-_170192099 BC053671	-98969	-	BC015147 BC114491 AB067488 CR933642 AL050385 TSC_hg19_v1_chr4_-_170533735 BC068201 CR936672	242620	-	TSC_hg19_v1_chr4_-_170533762 NM_001199397 NM_001199398 NM_001199399 NM_001199400 NM_012224	242753	-	TSC_hg19_v1_chr4_+_170541683 NM_001243372 NM_001829 NM_173872	250655	+	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1##AK021429|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1##BC015147|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC114491|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AB067488|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR933642|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AL050385|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC068201|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR936672|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199397|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199398|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199399|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199400|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_012224|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001243372|CLCN3|1182|chloride channel 3##NM_001829|CLCN3|1182|chloride channel 3##NM_173872|CLCN3|1182|chloride channel 3	0.0	
chr9	100290732	100290881	reg1032665.p1	4.181	+	TSC_hg19_v1_chr9_+_100263947 BC002660 NM_003275	-26868	+	NM_001166116 AK314533	-27344	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	-116427	+	TSC_hg19_v1_chr9_-_100395642 AK094043 AK291199 AX748426 BC035604 BX648493 BX538308 AK128615	104823	-	NM_002486 AK312807 TSC_hg19_v1_chr9_+_100395897 D32002	105020	+	NM_139246	105155	-	BC002660|TMOD1|7111|tropomodulin 1##NM_003275|TMOD1|7111|tropomodulin 1##NM_001166116|TMOD1|7111|tropomodulin 1##AK314533|TMOD1|7111|tropomodulin 1##AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7##AK094043|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK291199|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BC035604|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX648493|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX538308|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK128615|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##NM_002486|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##AK312807|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##D32002|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##NM_139246|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2	0.0	
chrX	24100086	24100216	reg1030475.p2	4.181	+	TSC_hg19_v1_chrX_+_24073072 AK222577 AK290397 AK312247 AB590041 CU676476 DQ891794 DQ894977 AB451230 AB451353 L19161	-27073	+	TSC_hg19_v1_chrX_+_24073062 BC019906 NM_001415	-27087	+	AK057298 NM_030624	-54849	-	AB209892 NM_001178086 NM_001178095 X59738 TSC_hg19_v1_chrX_+_24167845 NM_001178084 NM_001178085 NM_003410	67641	+	X59739 X59740 TSC_hg19_v1_chrX_+_24167864	67721	+	NM_001136233	231280	-	AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##BC019906|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##NM_001415|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK057298|KLHL15|80311|kelch-like 15 (Drosophila)##NM_030624|KLHL15|80311|kelch-like 15 (Drosophila)##AB209892|ZFX|7543|zinc finger protein, X-linked##NM_001178086|ZFX|7543|zinc finger protein, X-linked##NM_001178095|ZFX|7543|zinc finger protein, X-linked##X59738|ZFX|7543|zinc finger protein, X-linked##NM_001178084|ZFX|7543|zinc finger protein, X-linked##NM_001178085|ZFX|7543|zinc finger protein, X-linked##NM_003410|ZFX|7543|zinc finger protein, X-linked##X59739|ZFX|7543|zinc finger protein, X-linked##X59740|ZFX|7543|zinc finger protein, X-linked##NM_001136233|FAM48B2|170067|family with sequence similarity 48, member B2	0.0	
chr11	10830073	10830141	reg1033481.p1	4.180	+	TSC_hg19_v1_chr11_-_10830044 AK302886 AK310738	-51	-	TSC_hg19_v1_chr11_+_10829631 AK055888	-506	+	BC065276 NM_001172705 BX647799 AK123338	-533	-	TSC_hg19_v1_chr11_-_10830388 BC018975	267	-	TSC_hg19_v1_chr11_-_10830474 AB209267 BC018746 AY513274 BC039851 U76111 U73824 BC043149 AK223548	370	-	NM_001042559 NM_001418 TSC_hg19_v1_chr11_-_10830664	519	-	AK302886|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK310738|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK055888|LOC144017|144017|uncharacterized LOC144017##BC065276|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##NM_001172705|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##BX647799|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK123338|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##BC018975|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AB209267|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##BC018746|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AY513274|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##BC039851|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##U76111|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##U73824|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##BC043149|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK223548|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##NM_001042559|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##NM_001418|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	0.0	
chr11	120804943	120805044	reg1025517.p1	4.180	+	AB384776 NM_014619 S67803	-273966	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-422528	+	BC063117 NM_001198665 NM_015313	-597376	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	89817	+	NM_005422	168381	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	358412	+	NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.534828	CTCF.p2:5:0.535
chr13	111837216	111837369	reg1030430.p1	4.180	+	TSC_hg19_v1_chr13_+_111806070 D63476	-31214	+	TSC_hg19_v1_chr13_+_111806041 AB177849 NM_003899	-31241	+	AK300157 TSC_hg19_v1_chr13_+_111806035	-31256	+	NM_001113513 BC050521	1894	+	AK300272 TSC_hg19_v1_chr13_+_111855425	18130	+	BC029889 NM_152324	135722	+	D63476|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AB177849|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_003899|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK300157|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113513|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC050521|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC029889|C13orf16|121793|chromosome 13 open reading frame 16##NM_152324|C13orf16|121793|chromosome 13 open reading frame 16	0.0	
chr16	18490268	18490390	reg1043149.p1	4.180	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	-925524	-	TSC_hg19_v1_chr16_+_16326508 AB463143	-2163799	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-2163841	+	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	83062	-	TSC_hg19_v1_chr16_-_18798077 AK127316	307767	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	311326	-	AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a	0.681963	CTCF.p2:1:0.682
chr17	8819097	8819272	reg1029794.p1	4.180	+	AY725853 AF128881 NM_014308	-3368	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-48200	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-116632	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	49797	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	105783	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	659947	-	AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8	0.182675	
chr22	37342961	37343081	reg1029559.p1	4.180	+	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	-33363	+	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	-85913	+	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	-127502	-	BC042635 CR456416 NM_001163857 NM_178552	60836	-	D87292 TSC_hg19_v1_chr22_-_37415489 AK091874 BC010148 AK000862 AK223521 AK301300 NM_003312	72460	-	NM_001013436 NM_001130517 NM_021126 TSC_hg19_v1_chr22_+_37415789	72724	+	BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##BC042635|C22orf33|339669|chromosome 22 open reading frame 33##CR456416|C22orf33|339669|chromosome 22 open reading frame 33##NM_001163857|C22orf33|339669|chromosome 22 open reading frame 33##NM_178552|C22orf33|339669|chromosome 22 open reading frame 33##D87292|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK091874|TST|7263|thiosulfate sulfurtransferase (rhodanese)##BC010148|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK000862|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK223521|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK301300|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_003312|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_001013436|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001130517|MPST|4357|mercaptopyruvate sulfurtransferase##NM_021126|MPST|4357|mercaptopyruvate sulfurtransferase	0.0	
chr5	154384027	154384147	reg1027976.p1	4.180	+	TSC_hg19_v1_chr5_+_154320654 NM_001014990 NM_014180 AK000601 AK302784 CR933679 BC012565 AF161507 CU680362	-63438	+	TSC_hg19_v1_chr5_-_154317760 AB385260 AY063750 AK022748 BC113614 BC143724 BC036894 BC040931 AK074066 AK315101 NM_001252156 NM_015465	-66371	-	TSC_hg19_v1_chr5_+_154238213 AK297381 BC017366	-145845	+	NM_001099293 AK302388	9199	+	BX537948 NM_000337 NM_001128209 NM_172244	1369673	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	1370086	+	NM_001014990|MRPL22|29093|mitochondrial ribosomal protein L22##NM_014180|MRPL22|29093|mitochondrial ribosomal protein L22##AK000601|MRPL22|29093|mitochondrial ribosomal protein L22##AK302784|MRPL22|29093|mitochondrial ribosomal protein L22##CR933679|MRPL22|29093|mitochondrial ribosomal protein L22##BC012565|MRPL22|29093|mitochondrial ribosomal protein L22##AF161507|MRPL22|29093|mitochondrial ribosomal protein L22##AY063750|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK022748|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC113614|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC143724|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC036894|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC040931|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK074066|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK315101|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_001252156|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_015465|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK297381|CNOT8|9337|CCR4-NOT transcription complex, subunit 8##BC017366|CNOT8|9337|CCR4-NOT transcription complex, subunit 8##NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	0.999548	CTCF.p2:20:1.000
chr6	154730094	154730266	reg1033981.p1	4.180	+	AK289917 AJ310566 NM_001130700 NM_015553 TSC_hg19_v1_chr6_-_154677938	-52265	-	BX647254 NM_001130699	-78966	-	EU360599 EU362990 NM_001145287	-322539	+	TSC_hg19_v1_chr6_-_154831690 BC060761	101491	-	TSC_hg19_v1_chr6_-_154831721 AY328891 AY328892 AY328893 NM_173515	101555	-	TSC_hg19_v1_chr6_-_154831788 AK055911	101622	-	AK289917|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##AJ310566|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130700|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_015553|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##BX647254|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130699|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##EU360599|OPRM1|4988|opioid receptor, mu 1##EU362990|OPRM1|4988|opioid receptor, mu 1##NM_001145287|OPRM1|4988|opioid receptor, mu 1##BC060761|CNKSR3|154043|CNKSR family member 3##AY328891|CNKSR3|154043|CNKSR family member 3##AY328892|CNKSR3|154043|CNKSR family member 3##AY328893|CNKSR3|154043|CNKSR family member 3##NM_173515|CNKSR3|154043|CNKSR family member 3##AK055911|CNKSR3|154043|CNKSR family member 3	0.916398	CTCF.p2:-7:0.916
chr8	96114976	96115086	reg1034195.p1	4.180	+	TSC_hg19_v1_chr8_+_96037224 NM_152416 BC028166 DQ891641 DQ894830 AK298631 AK301414	-77727	+	TSC_hg19_v1_chr8_-_95961604 AK315071 AF409114 AF409115 AK125880 NM_001135733 NM_033285	-153374	-	TSC_hg19_v1_chr8_-_95907430 BC007015 BC020729 NM_057749	-207579	-	TSC_hg19_v1_chr8_+_96145948 NM_024613	30914	+	TSC_hg19_v1_chr8_+_96146012 AL834473 BC011806	30977	+	TSC_hg19_v1_chr8_+_96146116 AK023249	31105	+	NM_152416|C8orf38|137682|chromosome 8 open reading frame 38##BC028166|C8orf38|137682|chromosome 8 open reading frame 38##DQ891641|C8orf38|137682|chromosome 8 open reading frame 38##DQ894830|C8orf38|137682|chromosome 8 open reading frame 38##AK298631|C8orf38|137682|chromosome 8 open reading frame 38##AK301414|C8orf38|137682|chromosome 8 open reading frame 38##AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##BC007015|CCNE2|9134|cyclin E2##BC020729|CCNE2|9134|cyclin E2##NM_057749|CCNE2|9134|cyclin E2##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##AL834473|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC011806|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2	0.968661	CTCF.p2:19:0.969
chr9	81848607	81848718	reg1030324.p1	4.180	+	AK295222 TSC_hg19_v1_chr9_+_80912042 AK295310 NM_021154 NM_058179 BC004863 BC018129 BC000971 BC001618 AK025460 BC016645 AY131232 AF113132 DQ894126 CU676192 CU677657 BT006840	-936604	+	TSC_hg19_v1_chr9_+_80850990 NM_001098802 NM_032171 AK303457 AK022705 BC058931 BC128058	-997632	+	AB463062 AF011496 AF329284 AF493896 AM392842 AM393393 AM393764 CU691228 L76256 BC075097 BC075096 U40038 BC057777 BC067850 BC069520 NM_002072	-1202478	-	TSC_hg19_v1_chr9_+_82186879 NM_007005	338224	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	338862	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	339023	+	AK295222|PSAT1|29968|phosphoserine aminotransferase 1##AK295310|PSAT1|29968|phosphoserine aminotransferase 1##NM_021154|PSAT1|29968|phosphoserine aminotransferase 1##NM_058179|PSAT1|29968|phosphoserine aminotransferase 1##BC004863|PSAT1|29968|phosphoserine aminotransferase 1##BC018129|PSAT1|29968|phosphoserine aminotransferase 1##BC000971|PSAT1|29968|phosphoserine aminotransferase 1##AK025460|PSAT1|29968|phosphoserine aminotransferase 1##BC016645|PSAT1|29968|phosphoserine aminotransferase 1##AY131232|PSAT1|29968|phosphoserine aminotransferase 1##AF113132|PSAT1|29968|phosphoserine aminotransferase 1##DQ894126|PSAT1|29968|phosphoserine aminotransferase 1##BT006840|PSAT1|29968|phosphoserine aminotransferase 1##NM_001098802|CEP78|84131|centrosomal protein 78kDa##NM_032171|CEP78|84131|centrosomal protein 78kDa##AK303457|CEP78|84131|centrosomal protein 78kDa##AK022705|CEP78|84131|centrosomal protein 78kDa##BC058931|CEP78|84131|centrosomal protein 78kDa##BC128058|CEP78|84131|centrosomal protein 78kDa##AF011496|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF329284|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AF493896|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM392842|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393393|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##AM393764|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##L76256|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075097|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC075096|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##U40038|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC057777|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC067850|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##BC069520|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_002072|GNAQ|2776|guanine nucleotide binding protein (G protein), q polypeptide##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)	0.941368	CTCF.p2:5:0.914
chr11	65278077	65278258	reg1000245.p1	4.179	+	TSC_hg19_v1_chr11_+_65271764 AF001540	-6657	+	TSC_hg19_v1_chr11_+_65268717 BC063689 AK130345	-9650	+	TSC_hg19_v1_chr11_+_65267017 AF001541	-11075	+	TSC_hg19_v1_chr11_+_65292533 NM_001048218 NM_020680	14370	+	TSC_hg19_v1_chr11_+_65292576 AF297709 BC069233 AK314945 AK302198 AB047077 AB051427 AB051428	14433	+	TSC_hg19_v1_chr11_-_65314049 AK090750	35942	-	BC063689|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##AK130345|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##NM_001048218|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##NM_020680|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AF297709|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##BC069233|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK314945|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK302198|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB047077|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB051427|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB051428|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK090750|LTBP3|4054|latent transforming growth factor beta binding protein 3	0.0	
chr12	8782376	8782557	reg1024965.p2	4.179	+	AB040431 BC006296 NM_020661	-17027	-	CU674354 BC000715 AY358499 AB024718 NM_014358 AK312671	-88992	-	BC032313 NM_080387 AY297446 AY115592 AK314071 AF411850 AY486482 AY486483 DQ891244 DQ894429	-116235	+	TSC_hg19_v1_chr12_-_8815272 AK315807 BC005901 AK290585 AK299475	32830	-	TSC_hg19_v1_chr12_-_8815423 U37283 NM_003480	32935	-	AK124368 TSC_hg19_v1_chr12_-_8815486	33016	-	AB040431|AICDA|57379|activation-induced cytidine deaminase##BC006296|AICDA|57379|activation-induced cytidine deaminase##NM_020661|AICDA|57379|activation-induced cytidine deaminase##BC000715|CLEC4E|26253|C-type lectin domain family 4, member E##AY358499|CLEC4E|26253|C-type lectin domain family 4, member E##AB024718|CLEC4E|26253|C-type lectin domain family 4, member E##NM_014358|CLEC4E|26253|C-type lectin domain family 4, member E##AK312671|CLEC4E|26253|C-type lectin domain family 4, member E##BC032313|CLEC4D|338339|C-type lectin domain family 4, member D##NM_080387|CLEC4D|338339|C-type lectin domain family 4, member D##AY297446|CLEC4D|338339|C-type lectin domain family 4, member D##AY115592|CLEC4D|338339|C-type lectin domain family 4, member D##AK314071|CLEC4D|338339|C-type lectin domain family 4, member D##AF411850|CLEC4D|338339|C-type lectin domain family 4, member D##AY486482|CLEC4D|338339|C-type lectin domain family 4, member D##AY486483|CLEC4D|338339|C-type lectin domain family 4, member D##DQ894429|CLEC4D|338339|C-type lectin domain family 4, member D##AK315807|MFAP5|8076|microfibrillar associated protein 5##BC005901|MFAP5|8076|microfibrillar associated protein 5##AK290585|MFAP5|8076|microfibrillar associated protein 5##AK299475|MFAP5|8076|microfibrillar associated protein 5##U37283|MFAP5|8076|microfibrillar associated protein 5##NM_003480|MFAP5|8076|microfibrillar associated protein 5##AK124368|MFAP5|8076|microfibrillar associated protein 5	0.0	
chr1	46807870	46807963	reg1030167.p1	4.179	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-1473	+	TSC_hg19_v1_chr1_+_46769369 D28439 BC093060 BC001934 NM_006004 BC015177 BC107703 BC001426 AK311967 Y00764 M36647 BT007070	-38529	+	TSC_hg19_v1_chr1_-_46769053 NM_006369 AK297596	-38868	-	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	52060	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	164756	+	NM_001097611	208970	-	NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##D28439|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC093060|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001934|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006004|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC015177|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC107703|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001426|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##AK311967|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##Y00764|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##M36647|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BT007070|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006369|LRRC41|10489|leucine rich repeat containing 41##AK297596|LRRC41|10489|leucine rich repeat containing 41##NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001097611|KNCN|148930|kinocilin	0.206103	CTCF.p2:-5:0.206
chr2	164685163	164685304	reg1036601.p1	4.179	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	-92716	-	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-989986	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-990109	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	739771	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	792660	-	TSC_hg19_v1_chr2_-_165477987 AK307744 AK313153	792760	-	BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14##AK307744|GRB14|2888|growth factor receptor-bound protein 14##AK313153|GRB14|2888|growth factor receptor-bound protein 14	0.899684	CTCF.p2:-14:0.900
chr7	21373541	21373607	reg1033305.p1	4.179	+	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	-547040	-	TSC_hg19_v1_chr7_-_20826429 AK299947	-547146	-	TSC_hg19_v1_chr7_-_20825382 AB464710	-548192	-	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	94245	+	AB591008 TSC_hg19_v1_chr7_+_21468356	94750	+	AJ320497 NM_003777	209258	+	AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor##AK299947|SP8|221833|Sp8 transcription factor##AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11	0.0	
chr8	105504543	105504711	reg1036478.p1	4.179	+	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	-25412	-	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	-152575	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	-673052	+	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	96548	-	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	96620	-	AF119334 BC109222 BC109223 NM_012082	826519	+	BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2	0.845272	CTCF.p2:12:0.845
chrY	1537510	1537598	reg1025804.p2	4.179	+	AK301844 NM_001173473	-14903	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-15753	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-76585	-	BC043610 GQ280263 NM_178129 AK126147	68484	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	122975	+	NM_004043 U11090	126793	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.074226	
chr14	55031048	55031152	reg1008680.p2	4.178	+	AK315318 AK289478 TSC_hg19_v1_chr14_+_54976623 NM_006568 BC015063 U66469 CU677207 EU832831 GQ129438	-54489	+	TSC_hg19_v1_chr14_-_54955728 AB001106 BX647679 NM_004124	-75345	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	-75415	-	NM_001161576 NM_015589 BC057838 TSC_hg19_v1_chr14_+_55034359	3244	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	3536	+	TSC_hg19_v1_chr14_+_55168831 AB028976	137789	+	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1##AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1##NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1##BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1##U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1##EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1##GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1##AB001106|GMFB|2764|glia maturation factor, beta##BX647679|GMFB|2764|glia maturation factor, beta##NM_004124|GMFB|2764|glia maturation factor, beta##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta##NM_001161576|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_015589|SAMD4A|23034|sterile alpha motif domain containing 4A##BC057838|SAMD4A|23034|sterile alpha motif domain containing 4A##AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A	0.0	
chr19	12404514	12404694	reg1028077.p1	4.178	+	TSC_hg19_v1_chr19_+_12305871 AK093188 AX721123	-98698	+	AK023304 TSC_hg19_v1_chr19_+_12305836	-98771	+	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	-130695	+	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	1048	-	AK313755 BC022523 AK092116 AX747362 NM_145276	39880	-	AK024418 AK295923 NM_030824	71856	-	AK023304|LOC100289333|100289333|uncharacterized LOC100289333##NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136##BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44##AK313755|ZNF563|147837|zinc finger protein 563##BC022523|ZNF563|147837|zinc finger protein 563##AK092116|ZNF563|147837|zinc finger protein 563##NM_145276|ZNF563|147837|zinc finger protein 563##AK024418|ZNF442|79973|zinc finger protein 442##AK295923|ZNF442|79973|zinc finger protein 442##NM_030824|ZNF442|79973|zinc finger protein 442	0.0	
chr21	15906106	15906287	reg1029997.p1	4.178	+	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-150723	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-317699	+	AB463838 AY197607 NM_198996	-326948	-	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	12453	-	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	531021	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	1196129	+	AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AY197607|LIPI|149998|lipase, member I##NM_198996|LIPI|149998|lipase, member I##BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25	0.0	
chr3	156534950	156535112	reg1032560.p1	4.178	+	BC034397 NM_001184718	-140579	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-141616	+	CR749647 NM_001184717	-142317	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	9080	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	342878	-	NM_020307 AK122738	343483	-	BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##CR749647|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184717|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1	0.0	
chr4	40675177	40675357	reg1031956.p2	4.178	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-42560	-	TSC_hg19_v1_chr4_-_40631882 BC034402 BC071585 NM_001098634	-43402	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	-157309	-	BC042401 NM_024677 BC036568 AK024063	76679	+	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	183908	-	BC088372 TSC_hg19_v1_chr4_-_40936716	261411	-	AK304206|RBM47|54502|RNA binding motif protein 47##BC034402|RBM47|54502|RNA binding motif protein 47##BC071585|RBM47|54502|RNA binding motif protein 47##NM_001098634|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	0.0	
chr5	138473495	138473626	reg1033226.p1	4.178	+	HQ589335 TSC_hg19_v1_chr5_+_138211097	-262469	+	TSC_hg19_v1_chr5_-_138211057 NM_015564	-262501	-	AK309790 TSC_hg19_v1_chr5_-_138211025 AB007876 BC028172 AK291064 AK297332	-262547	-	AF547994 TSC_hg19_v1_chr5_-_138533996 AK075177	60429	-	TSC_hg19_v1_chr5_-_138533998 AY358950 BC011568	60448	-	TSC_hg19_v1_chr5_-_138534058 AJ299442 AK074624 NM_001037633 NM_022464	60486	-	HQ589335|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AF547994|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK075177|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AY358950|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##BC011568|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AJ299442|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK074624|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_001037633|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_022464|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)	0.827545	CTCF.p2:-33:0.828
chr5	147836982	147837102	reg1032117.p2	4.178	+	TSC_hg19_v1_chr5_+_147795459 BC005849 BC005873 AL832841	-41517	+	BC050424 TSC_hg19_v1_chr5_+_147774324 AB385244 CU689628	-62736	+	TSC_hg19_v1_chr5_+_147763577 BC033454 AK024024	-73465	+	AJ633645 AM712912 Y10437 Y13584 AJ011371 BC095497 Y09586 AJ131725 AJ131726 AJ278979 AJ278980 AJ278981 AJ278982 Y08756 Y12505 Y12506 Y12507 AJ519673 BC074755 NM_001040169 NM_001040172 NM_001040173 NM_199453	179557	-	AJ131724 TSC_hg19_v1_chr5_-_148033739 NM_000870	196685	-	AK308471 TSC_hg19_v1_chr5_-_148034091	197048	-	BC005849|FBXO38|81545|F-box protein 38##BC005873|FBXO38|81545|F-box protein 38##AL832841|FBXO38|81545|F-box protein 38##BC050424|FBXO38|81545|F-box protein 38##BC033454|FBXO38|81545|F-box protein 38##AK024024|FBXO38|81545|F-box protein 38##AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131724|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000870|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4	0.0	
chr6	20689100	20689247	reg1031372.p1	4.178	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-154450	+	CR749285 NM_001243076	-285140	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-287070	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	905199	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	977486	+	BC015850 NM_000948	1608556	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.0	
chr8	27219798	27219979	reg1029511.p2	4.178	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-36811	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-36836	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-36871	+	AK314787 U62431 NM_000742	116883	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	128770	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	252317	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	0.0	
chr9	132785759	132785939	reg1025533.p3	4.178	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-188084	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-188127	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-188165	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	19505	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	19639	-	BC039728 NM_001136557 NM_001136558 NM_020960	30135	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr9	35665272	35665387	reg1026679.p2	4.178	+	TSC_hg19_v1_chr9_-_35665222 BC033666 NM_032818 AY390225 AY390226	-86	-	AK303513 TSC_hg19_v1_chr9_-_35665193 AK225529	-138	-	TSC_hg19_v1_chr9_-_35665187 CU689686 AK027548 AK225501	-166	-	BC014950 EF122496 NM_001216 X66839 AJ010588 CU677133 DQ892208 DQ895404	8574	+	AK130045 EU106177 DQ892908 DQ896159 BC011776 TSC_hg19_v1_chr9_-_35689884	24512	-	M74817 M75165 X06825 M12125 AK304803 AK223258 AK294522 AK300249 TSC_hg19_v1_chr9_-_35689923 NM_003289 NM_213674	24648	-	BC033666|C9orf100|84904|chromosome 9 open reading frame 100##NM_032818|C9orf100|84904|chromosome 9 open reading frame 100##AY390225|C9orf100|84904|chromosome 9 open reading frame 100##AY390226|C9orf100|84904|chromosome 9 open reading frame 100##AK303513|C9orf100|84904|chromosome 9 open reading frame 100##AK225529|C9orf100|84904|chromosome 9 open reading frame 100##AK027548|C9orf100|84904|chromosome 9 open reading frame 100##AK225501|C9orf100|84904|chromosome 9 open reading frame 100##BC014950|CA9|768|carbonic anhydrase IX##EF122496|CA9|768|carbonic anhydrase IX##NM_001216|CA9|768|carbonic anhydrase IX##X66839|CA9|768|carbonic anhydrase IX##AJ010588|CA9|768|carbonic anhydrase IX##DQ892208|CA9|768|carbonic anhydrase IX##DQ895404|CA9|768|carbonic anhydrase IX##AK130045|TPM2|7169|tropomyosin 2 (beta)##EU106177|TPM2|7169|tropomyosin 2 (beta)##DQ892908|TPM2|7169|tropomyosin 2 (beta)##DQ896159|TPM2|7169|tropomyosin 2 (beta)##BC011776|TPM2|7169|tropomyosin 2 (beta)##M74817|TPM2|7169|tropomyosin 2 (beta)##M75165|TPM2|7169|tropomyosin 2 (beta)##X06825|TPM2|7169|tropomyosin 2 (beta)##M12125|TPM2|7169|tropomyosin 2 (beta)##AK304803|TPM2|7169|tropomyosin 2 (beta)##AK223258|TPM2|7169|tropomyosin 2 (beta)##AK294522|TPM2|7169|tropomyosin 2 (beta)##AK300249|TPM2|7169|tropomyosin 2 (beta)##NM_003289|TPM2|7169|tropomyosin 2 (beta)##NM_213674|TPM2|7169|tropomyosin 2 (beta)	0.0	
chr10	116231113	116231257	reg1006608.p1	4.177	+	BC024314 NM_001001936 NM_032550	-66671	-	AK123108 BC033212 AK027470 TSC_hg19_v1_chr10_-_116164254 AK294969 AK291712 AF474151	-66943	-	TSC_hg19_v1_chr10_+_115999012 AK122716 NM_198496 AJ536328 AJ616914 BC128588 AY572972 BC143380	-232026	+	CU677968 TSC_hg19_v1_chr10_-_116251632	20422	-	TSC_hg19_v1_chr10_-_116286631 AK298709 BC002448	55417	-	TSC_hg19_v1_chr10_-_116286673 CR749819 NM_006720 AK098277	55494	-	BC024314|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_001001936|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_032550|AFAP1L2|84632|actin filament associated protein 1-like 2##AK123108|AFAP1L2|84632|actin filament associated protein 1-like 2##BC033212|AFAP1L2|84632|actin filament associated protein 1-like 2##AK294969|AFAP1L2|84632|actin filament associated protein 1-like 2##AK291712|AFAP1L2|84632|actin filament associated protein 1-like 2##AF474151|AFAP1L2|84632|actin filament associated protein 1-like 2##AK122716|VWA2|340706|von Willebrand factor A domain containing 2##NM_198496|VWA2|340706|von Willebrand factor A domain containing 2##AJ536328|VWA2|340706|von Willebrand factor A domain containing 2##AJ616914|VWA2|340706|von Willebrand factor A domain containing 2##BC128588|VWA2|340706|von Willebrand factor A domain containing 2##AY572972|VWA2|340706|von Willebrand factor A domain containing 2##BC143380|VWA2|340706|von Willebrand factor A domain containing 2##AK298709|ABLIM1|3983|actin binding LIM protein 1##BC002448|ABLIM1|3983|actin binding LIM protein 1##CR749819|ABLIM1|3983|actin binding LIM protein 1##NM_006720|ABLIM1|3983|actin binding LIM protein 1##AK098277|ABLIM1|3983|actin binding LIM protein 1	0.0	
chr10	94502078	94502259	reg1034732.p2	4.177	+	TSC_hg19_v1_chr10_+_94449711 NM_002729 AK309463 AK314891 BC014336 BC015110 L16499 X67235 AB528006 BC050638 EU446478	-52459	+	TSC_hg19_v1_chr10_+_94352960 BC126211 BC136474 U37426 X85137	-149125	+	TSC_hg19_v1_chr10_+_94352886 BC050421 BC050667 AK314258	-149271	+	NM_001013848	92301	+	AK293857 NM_019053 AF220217 TSC_hg19_v1_chr10_+_94608276 AL832501 EF571007 AK315544 BC028395 CU688490 EU832839 GQ129240	106089	+	AY356349 NM_183374	318852	+	NM_002729|HHEX|3087|hematopoietically expressed homeobox##AK314891|HHEX|3087|hematopoietically expressed homeobox##BC014336|HHEX|3087|hematopoietically expressed homeobox##BC015110|HHEX|3087|hematopoietically expressed homeobox##L16499|HHEX|3087|hematopoietically expressed homeobox##X67235|HHEX|3087|hematopoietically expressed homeobox##BC050638|HHEX|3087|hematopoietically expressed homeobox##EU446478|HHEX|3087|hematopoietically expressed homeobox##BC126211|KIF11|3832|kinesin family member 11##BC136474|KIF11|3832|kinesin family member 11##U37426|KIF11|3832|kinesin family member 11##X85137|KIF11|3832|kinesin family member 11##BC050421|KIF11|3832|kinesin family member 11##BC050667|KIF11|3832|kinesin family member 11##AK314258|KIF11|3832|kinesin family member 11##NM_001013848|EXOC6|54536|exocyst complex component 6##AK293857|EXOC6|54536|exocyst complex component 6##NM_019053|EXOC6|54536|exocyst complex component 6##AF220217|EXOC6|54536|exocyst complex component 6##AL832501|EXOC6|54536|exocyst complex component 6##EF571007|EXOC6|54536|exocyst complex component 6##AK315544|EXOC6|54536|exocyst complex component 6##BC028395|EXOC6|54536|exocyst complex component 6##EU832839|EXOC6|54536|exocyst complex component 6##GQ129240|EXOC6|54536|exocyst complex component 6##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1	0.0	
chr1	43156612	43156724	reg1029659.p2	4.177	+	TSC_hg19_v1_chr1_+_43148644 BC013838	-8084	+	TSC_hg19_v1_chr1_+_43148189 DQ891609 DQ894802 AB385072	-8458	+	TSC_hg19_v1_chr1_+_43148169 BC015208	-8498	+	BC020164 TSC_hg19_v1_chr1_+_43162416	5733	+	AF497644 BC030524 AK298992 AK096063 AK291197 NM_001123395 NM_001185117 NM_148960	49160	-	AK027680 AK297980 TSC_hg19_v1_chr1_-_43232700 BC091513 BC143961 BC143962 AK075418 BC004160 AK027648 AF097431 AF097432 BC108311 AK027697 AK300210 BC068461	76020	-	BC013838|YBX1|4904|Y box binding protein 1##DQ891609|YBX1|4904|Y box binding protein 1##DQ894802|YBX1|4904|Y box binding protein 1##BC015208|YBX1|4904|Y box binding protein 1##BC020164|YBX1|4904|Y box binding protein 1##AF497644|CLDN19|149461|claudin 19##BC030524|CLDN19|149461|claudin 19##AK298992|CLDN19|149461|claudin 19##AK096063|CLDN19|149461|claudin 19##AK291197|CLDN19|149461|claudin 19##NM_001123395|CLDN19|149461|claudin 19##NM_001185117|CLDN19|149461|claudin 19##NM_148960|CLDN19|149461|claudin 19##AK027680|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK297980|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC091513|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC143961|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC143962|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK075418|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC004160|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK027648|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AF097431|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AF097432|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC108311|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK027697|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##AK300210|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1##BC068461|LEPRE1|64175|leucine proline-enriched proteoglycan (leprecan) 1	0.0	
chr16	12897387	12897556	reg1031609.p2	4.177	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-826898	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-838387	+	NM_001130007	-886953	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	180	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	248	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	97997	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr19	10356196	10356303	reg1030974.p2	4.177	+	NM_004230 TSC_hg19_v1_chr19_-_10342058	-14243	-	TSC_hg19_v1_chr19_-_10305646 BC126227 BC144093 NM_001130823 NM_001379 AF180682 X63692	-50522	-	TSC_hg19_v1_chr19_-_10305600 BC092517	-50644	-	TSC_hg19_v1_chr19_+_10362680 NM_015956 NM_146387 NM_146388 AF132962 BC000756	6398	+	TSC_hg19_v1_chr19_+_10362889 BC009858	6649	+	TSC_hg19_v1_chr19_+_10362916 AB049635 AY007152	6743	+	NM_004230|S1PR2|9294|sphingosine-1-phosphate receptor 2##BC126227|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC144093|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001130823|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001379|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##AF180682|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##X63692|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC092517|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_015956|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146387|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146388|MRPL4|51073|mitochondrial ribosomal protein L4##AF132962|MRPL4|51073|mitochondrial ribosomal protein L4##BC000756|MRPL4|51073|mitochondrial ribosomal protein L4##BC009858|MRPL4|51073|mitochondrial ribosomal protein L4##AB049635|MRPL4|51073|mitochondrial ribosomal protein L4##AY007152|MRPL4|51073|mitochondrial ribosomal protein L4	0.077844	
chr20	10628197	10628342	reg1036182.p1	4.177	+	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-212293	+	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	-213430	-	AF221993 NM_018848	-215700	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	25935	-	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	26300	-	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1243180	+	BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3	0.0	
chr20	4230271	4230398	reg1033348.p1	4.177	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	-744	-	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	-100811	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	-100899	+	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	436642	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	472200	+	AY154472 NM_170774	565434	-	L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	0.787101	CTCF.p2:2:0.787
chr2	136876237	136876358	reg1030166.p3	4.177	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-621	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-2499	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-133081	-	TSC_hg19_v1_chr2_+_137523114 AK299929	646819	+	NM_001080427	872164	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1845637	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.0	
chr5	159670336	159670428	reg1026702.p1	4.177	+	NM_001445 X90908 U19869 CU692652	-13883	+	NM_001040442 AB528665	-44302	+	DQ132786 NM_001130958	-56009	+	AK294000 TSC_hg19_v1_chr5_-_159739572 BC035871 NM_024565 AK302823	69162	-	TSC_hg19_v1_chr5_-_159797619 BC054506 BC011699 AF329836 AB590457 AY358839 NM_031908	127250	-	BC032603 TSC_hg19_v1_chr5_-_159827053 NM_022090	156701	-	NM_001445|FABP6|2172|fatty acid binding protein 6, ileal##X90908|FABP6|2172|fatty acid binding protein 6, ileal##U19869|FABP6|2172|fatty acid binding protein 6, ileal##NM_001040442|FABP6|2172|fatty acid binding protein 6, ileal##DQ132786|FABP6|2172|fatty acid binding protein 6, ileal##NM_001130958|FABP6|2172|fatty acid binding protein 6, ileal##AK294000|CCNJL|79616|cyclin J-like##BC035871|CCNJL|79616|cyclin J-like##NM_024565|CCNJL|79616|cyclin J-like##AK302823|CCNJL|79616|cyclin J-like##BC054506|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##BC011699|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##AF329836|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##AY358839|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##NM_031908|C1QTNF2|114898|C1q and tumor necrosis factor related protein 2##BC032603|C5orf54|63920|chromosome 5 open reading frame 54##NM_022090|C5orf54|63920|chromosome 5 open reading frame 54	0.873598	CTCF.p2:-64:0.861
chr15	72185090	72185220	reg1036571.p2	4.176	+	AF121129 NM_014249 NM_016346 AF148128	-82243	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	-345575	+	NM_024817 BC140868	-751345	+	AK097557 NM_001166340	221443	+	NM_001172109 NM_001172110	224063	+	BC140869 BC144683 TSC_hg19_v1_chr15_-_72410212 AF117888	225010	-	AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172109|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172110|SENP8|123228|SUMO/sentrin specific peptidase family member 8##BC140869|MYO9A|4649|myosin IXA##BC144683|MYO9A|4649|myosin IXA##AF117888|MYO9A|4649|myosin IXA	0.0	
chr19	49378628	49378764	reg1031485.p1	4.176	+	DQ891855 EU176641 TSC_hg19_v1_chr19_+_49376488 AB464097 CR457259	-2207	+	TSC_hg19_v1_chr19_+_49375698 BC003067 U83981	-2999	+	AK001361 AK225632 AK296668 AK297615 AK298765 AK311366 TSC_hg19_v1_chr19_+_49375677	-3019	+	U82469 BC026070 NM_003323	23270	-	AK292066 NM_006184	24610	+	TSC_hg19_v1_chr19_+_49403601 AK315422 BX647718 AK303126 AK222805 M96824	24888	+	DQ891855|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##EU176641|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##CR457259|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##BC003067|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##U83981|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK001361|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK225632|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK296668|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK297615|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK298765|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##U82469|TULP2|7288|tubby like protein 2##BC026070|TULP2|7288|tubby like protein 2##NM_003323|TULP2|7288|tubby like protein 2##AK292066|NUCB1|4924|nucleobindin 1##NM_006184|NUCB1|4924|nucleobindin 1##AK315422|NUCB1|4924|nucleobindin 1##BX647718|NUCB1|4924|nucleobindin 1##AK303126|NUCB1|4924|nucleobindin 1##AK222805|NUCB1|4924|nucleobindin 1##M96824|NUCB1|4924|nucleobindin 1	0.0	
chr1	9606817	9606930	reg1026758.p2	4.176	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-7237	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	-7341	+	TSC_hg19_v1_chr1_+_9415945 CU677397	-190927	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	42083	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	104931	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	277022	-	BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1	0.144356	
chr3	38669602	38669690	reg1035154.p2	4.176	+	TSC_hg19_v1_chr3_+_38537982 AK315814	-131666	+	BC015820 TSC_hg19_v1_chr3_+_38537851 BC065368 AK023235 AK289602	-131796	+	TSC_hg19_v1_chr3_+_38537830 AK290107 NM_001145464 NM_005107 AB020523 BC104213 BC104212 AK301067 AK308814	-131851	+	M77235 NM_000335 NM_001099404 NM_001099405 NM_198056 BC051374 NM_001160160 NM_001160161	21494	-	AF117907 NM_006514	165854	-	AF109737 AF150882 NM_014139	322405	-	AK315814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC015820|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC065368|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK023235|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK289602|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK290107|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##NM_001145464|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##NM_005107|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AB020523|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC104213|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC104212|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK301067|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK308814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##M77235|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_000335|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099404|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099405|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_198056|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##BC051374|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160160|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160161|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##AF117907|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##NM_006514|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	0.175478	
chr5	37379244	37379393	reg1033608.p1	4.176	+	TSC_hg19_v1_chr5_-_37371206 AK297143	-8104	-	AK315028 TSC_hg19_v1_chr5_-_37371193 BC039257 NM_153485	-8129	-	AJ007558 CU691696 TSC_hg19_v1_chr5_-_37371171	-8191	-	TSC_hg19_v1_chr5_+_37379386 AK310901 AK291179 BX537655	67	+	TSC_hg19_v1_chr5_+_37379419 AL512685 BC009648 NM_018034 BC025315 AK001095	112	+	AJ001899 NM_199231	456274	-	AK297143|NUP155|9631|nucleoporin 155kDa##AK315028|NUP155|9631|nucleoporin 155kDa##BC039257|NUP155|9631|nucleoporin 155kDa##NM_153485|NUP155|9631|nucleoporin 155kDa##AJ007558|NUP155|9631|nucleoporin 155kDa##AK310901|WDR70|55100|WD repeat domain 70##AK291179|WDR70|55100|WD repeat domain 70##BX537655|WDR70|55100|WD repeat domain 70##AL512685|WDR70|55100|WD repeat domain 70##BC009648|WDR70|55100|WD repeat domain 70##NM_018034|WDR70|55100|WD repeat domain 70##BC025315|WDR70|55100|WD repeat domain 70##AK001095|WDR70|55100|WD repeat domain 70##AJ001899|GDNF|2668|glial cell derived neurotrophic factor##NM_199231|GDNF|2668|glial cell derived neurotrophic factor	0.033339	
chr10	46661410	46661536	reg1035060.p2	4.175	+	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-20452	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	-20785	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	-41477	-	BC139914 AK290186 TSC_hg19_v1_chr10_-_46970538	309037	-	TSC_hg19_v1_chr10_-_46970597 AK131036 AK293632 NM_031912 NM_181519	309127	-	BC011672 NM_014696	332072	+	BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##BC139914|SYT15|83849|synaptotagmin XV##AK290186|SYT15|83849|synaptotagmin XV##AK131036|SYT15|83849|synaptotagmin XV##AK293632|SYT15|83849|synaptotagmin XV##NM_031912|SYT15|83849|synaptotagmin XV##NM_181519|SYT15|83849|synaptotagmin XV##BC011672|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##NM_014696|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2	0.979716	CTCF.p2:-20:0.980
chr10	60820642	60820785	reg1034562.p2	4.175	+	TSC_hg19_v1_chr10_+_60272869 NM_001080512 AY726586	-547801	+	BC029815 TSC_hg19_v1_chr10_+_60145169 AK312558 M62810 NM_003201 BC018628 BC104482 BC126366 EU279428 HQ258758 AB451241 AB451366 AB464302 BT019658 BT019659 CR407653	-675508	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	-725877	+	TSC_hg19_v1_chr10_-_60936189 AK055418	115493	-	AL834339 NM_032439 TSC_hg19_v1_chr10_+_60936408 CR749429	115675	+	BC011268 AK054956 TSC_hg19_v1_chr10_+_60936573 AB384640 AM392743	115847	+	NM_001080512|BICC1|80114|bicaudal C homolog 1 (Drosophila)##AY726586|BICC1|80114|bicaudal C homolog 1 (Drosophila)##BC029815|TFAM|7019|transcription factor A, mitochondrial##AK312558|TFAM|7019|transcription factor A, mitochondrial##M62810|TFAM|7019|transcription factor A, mitochondrial##NM_003201|TFAM|7019|transcription factor A, mitochondrial##BC018628|TFAM|7019|transcription factor A, mitochondrial##BC104482|TFAM|7019|transcription factor A, mitochondrial##BC126366|TFAM|7019|transcription factor A, mitochondrial##EU279428|TFAM|7019|transcription factor A, mitochondrial##HQ258758|TFAM|7019|transcription factor A, mitochondrial##AB451241|TFAM|7019|transcription factor A, mitochondrial##AB451366|TFAM|7019|transcription factor A, mitochondrial##BT019658|TFAM|7019|transcription factor A, mitochondrial##BT019659|TFAM|7019|transcription factor A, mitochondrial##CR407653|TFAM|7019|transcription factor A, mitochondrial##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	0.0	
chr10	70863745	70863925	reg1036557.p1	4.175	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	-15951	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	-15999	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-115300	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	20056	+	TSC_hg19_v1_chr10_+_70883933 BX649092 AK315496	20098	+	AK297142 TSC_hg19_v1_chr10_+_70883939	20105	+	D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_002727|SRGN|5552|serglycin##NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BX649092|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK315496|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK297142|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.0	
chr14	95897687	95897775	reg1030105.p2	4.175	+	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	-111548	-	TSC_hg19_v1_chr14_+_95624023 BC040596	-273710	+	TSC_hg19_v1_chr14_-_95623867 BC046934 AB023145 BC150287 NM_177438	-273939	-	AK131436 BC146604 BX248076 NM_152592	44373	-	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	103284	-	TSC_hg19_v1_chr14_+_96001352 NM_016417	103595	+	AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC046934|DICER1|23405|dicer 1, ribonuclease type III##AB023145|DICER1|23405|dicer 1, ribonuclease type III##BC150287|DICER1|23405|dicer 1, ribonuclease type III##NM_177438|DICER1|23405|dicer 1, ribonuclease type III##AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##NM_016417|GLRX5|51218|glutaredoxin 5	0.0	
chr15	56081405	56081510	reg1035962.p2	4.175	+	AY630258 NM_173814 TSC_hg19_v1_chr15_-_56035276	-46231	-	AF457207 NM_015617	-200408	-	EF625686 TSC_hg19_v1_chr15_-_55880544	-200925	-	BC136605 BC144284 BC144285 AL832063 NM_198400	127859	-	TSC_hg19_v1_chr15_-_56285776 BC035707 AK304394 AY550969 BC152452 BC152562 D42055 NM_006154	204338	-	TSC_hg19_v1_chr15_-_56388663 AL832584	307240	-	AY630258|PRTG|283659|protogenin##NM_173814|PRTG|283659|protogenin##AF457207|PYGO1|26108|pygopus homolog 1 (Drosophila)##NM_015617|PYGO1|26108|pygopus homolog 1 (Drosophila)##EF625686|PYGO1|26108|pygopus homolog 1 (Drosophila)##BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832584|RFX7|64864|regulatory factor X, 7	0.977932	CTCF.p2:-3:0.978
chr15	84444635	84444740	reg1035854.p2	4.175	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-121860	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-328459	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-328627	+	NM_001243531	396554	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	699594	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	752785	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.011763	
chr17	77848316	77848397	reg1032367.p2	4.175	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	-35214	-	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-77449	-	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	-96375	+	BC044939 TSC_hg19_v1_chr17_+_77893233	44843	+	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	161246	-	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	162092	+	AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40	0.020949	
chr18	68266222	68266320	reg1030068.p1	4.175	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-310010	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-310104	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-393333	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	1944504	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	1945459	-	AF448839 NM_138999	2266662	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.999546	CTCF.p2:-14:1.000
chr3	52267304	52267485	reg1040602.p2	4.175	+	AF259262 NM_017442	-7216	-	TSC_hg19_v1_chr3_+_52232180 BC011798 BC063005 Y00451 X56351	-35191	+	TSC_hg19_v1_chr3_+_52232177 AK293190	-35219	+	CR456732 CR533520 CU678412 AM392602 DQ891754 DQ894936 AB385234 AF109365 TSC_hg19_v1_chr3_-_52273109 BC003161 BC000327 Y17169	5690	-	TSC_hg19_v1_chr3_-_52273175 AL136773 BC016452 BC021003 NM_007284	5768	-	TSC_hg19_v1_chr3_+_52273270 BC039681	5869	+	AF259262|TLR9|54106|toll-like receptor 9##NM_017442|TLR9|54106|toll-like receptor 9##BC011798|ALAS1|211|aminolevulinate, delta-, synthase 1##Y00451|ALAS1|211|aminolevulinate, delta-, synthase 1##X56351|ALAS1|211|aminolevulinate, delta-, synthase 1##AK293190|ALAS1|211|aminolevulinate, delta-, synthase 1##CR456732|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##CR533520|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##DQ891754|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##DQ894936|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##AF109365|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##BC003161|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##BC000327|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##Y17169|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##AL136773|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##BC016452|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##NM_007284|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)	0.0	
chr3	7588011	7588153	reg1030781.p1	4.175	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	-685184	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	-685283	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-2358591	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	955248	-	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	955433	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	955499	+	X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1	0.531629	CTCF.p2:34:0.532
chr5	159894548	159894729	reg1026541.p1	4.175	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-45735	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-45784	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-48533	-	AK025130 TSC_hg19_v1_chr5_-_160112393	217701	-	AB018258 AK295081 AK090832 AX746642 NM_025153	384493	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	1080488	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.0	
chr6	115337887	115338030	reg1034813.p2	4.175	+	AF503292 NM_153612 BC093911 BC093913	-953934	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-1045622	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	-1045686	-	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	1043924	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	1084051	+	AK097758 TSC_hg19_v1_chr6_-_116422450	1084472	-	AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	0.891021	CTCF.p2:7:0.891
chr6	34158047	34158143	reg1031680.p1	4.175	+	AB385221 EU432124 HQ258665 HQ258669 U92457 BC130526 BC130528 BC144057 NM_000841 X80818 AK308669	-56693	-	BC112314 BC143981 Y00695 BC069675 NM_001040109 NM_001184698 NM_002418	-386321	-	BC039864 NM_181336 TSC_hg19_v1_chr6_-_33756906	-401185	-	NM_002131 NM_145899 NM_145903 TSC_hg19_v1_chr6_+_34204617	46516	+	TSC_hg19_v1_chr6_+_34204649 AK096863 M23616 M23617 NM_145901 NM_145902 AK301434	46555	+	TSC_hg19_v1_chr6_+_34204678 X14957 X14958 AK308245	46576	+	EU432124|GRM4|2914|glutamate receptor, metabotropic 4##HQ258665|GRM4|2914|glutamate receptor, metabotropic 4##HQ258669|GRM4|2914|glutamate receptor, metabotropic 4##U92457|GRM4|2914|glutamate receptor, metabotropic 4##BC130526|GRM4|2914|glutamate receptor, metabotropic 4##BC130528|GRM4|2914|glutamate receptor, metabotropic 4##BC144057|GRM4|2914|glutamate receptor, metabotropic 4##NM_000841|GRM4|2914|glutamate receptor, metabotropic 4##X80818|GRM4|2914|glutamate receptor, metabotropic 4##BC112314|MLN|4295|motilin##BC143981|MLN|4295|motilin##Y00695|MLN|4295|motilin##BC069675|MLN|4295|motilin##NM_001040109|MLN|4295|motilin##NM_001184698|MLN|4295|motilin##NM_002418|MLN|4295|motilin##BC039864|LEMD2|221496|LEM domain containing 2##NM_181336|LEMD2|221496|LEM domain containing 2##NM_002131|HMGA1|3159|high mobility group AT-hook 1##NM_145899|HMGA1|3159|high mobility group AT-hook 1##NM_145903|HMGA1|3159|high mobility group AT-hook 1##AK096863|HMGA1|3159|high mobility group AT-hook 1##M23616|HMGA1|3159|high mobility group AT-hook 1##M23617|HMGA1|3159|high mobility group AT-hook 1##NM_145901|HMGA1|3159|high mobility group AT-hook 1##NM_145902|HMGA1|3159|high mobility group AT-hook 1##AK301434|HMGA1|3159|high mobility group AT-hook 1##X14957|HMGA1|3159|high mobility group AT-hook 1##X14958|HMGA1|3159|high mobility group AT-hook 1##AK308245|HMGA1|3159|high mobility group AT-hook 1	0.016657	
chr11	118743487	118743598	reg1026879.p2	4.174	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-81608	-	TSC_hg19_v1_chr11_-_118661865 Z11685	-81663	-	TSC_hg19_v1_chr11_-_118661860 BC026228	-81683	-	AK291512 NM_001716 BC110352 X68149 AB464488	11018	+	NM_032966 X68829	20558	+	AB094091 NM_182557	38070	-	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like	0.0	
chr14	93143446	93143627	reg1028563.p1	4.174	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	-24713	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	-24900	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-163577	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	71423	-	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	117150	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	245908	+	AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)	0.0	
chr15	30754577	30754683	reg1031931.p1	4.174	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-68918	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-640007	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-640288	-	TSC_hg19_v1_chr15_+_30918372 BC071990	163756	+	BC105788 NM_001039841	164248	+	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	441444	+	BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1	0.329839	CTCF.p2:8:0.330
chr17	44501830	44501922	reg1029189.p1	4.174	+	BC020869 AK289590 AK315857 BC041803 BC030570 BX647266 NM_001039083 NM_001103154 NM_001113738 NM_016632	-62754	-	BC040501 CR749232 NM_014834	-129380	+	AK291259 NM_001193465	-199149	-	BC040501 CR749232 NM_001006607	88199	+	BC020869 AB209344 AF208864 BX647266 NM_001113738 NM_016632	155171	-	NM_006178 AF135168 AF102846 AK294001 AK294727 AK294886 AK299786 BC030613 AK226078 AK290204 AK316057 U03985	166201	+	BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AK289590|ARL17A|51326|ADP-ribosylation factor-like 17A##AK315857|ARL17A|51326|ADP-ribosylation factor-like 17A##BC041803|ARL17A|51326|ADP-ribosylation factor-like 17A##BC030570|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001039083|ARL17B|100506084|ADP-ribosylation factor-like 17B##NM_001103154|ARL17B|100506084|ADP-ribosylation factor-like 17B##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A##BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_014834|LRRC37A|9884|leucine rich repeat containing 37A##AK291259|KIAA1267|284058|KIAA1267##NM_001193465|KIAA1267|284058|KIAA1267##BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_001006607|LRRC37A2|474170|leucine rich repeat containing 37, member A2##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AB209344|ARL17A|51326|ADP-ribosylation factor-like 17A##AF208864|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_006178|NSF|4905|N-ethylmaleimide-sensitive factor##AF135168|NSF|4905|N-ethylmaleimide-sensitive factor##AF102846|NSF|4905|N-ethylmaleimide-sensitive factor##AK294001|NSF|4905|N-ethylmaleimide-sensitive factor##AK294727|NSF|4905|N-ethylmaleimide-sensitive factor##AK294886|NSF|4905|N-ethylmaleimide-sensitive factor##AK299786|NSF|4905|N-ethylmaleimide-sensitive factor##BC030613|NSF|4905|N-ethylmaleimide-sensitive factor##AK226078|NSF|4905|N-ethylmaleimide-sensitive factor##AK290204|NSF|4905|N-ethylmaleimide-sensitive factor##AK316057|NSF|4905|N-ethylmaleimide-sensitive factor##U03985|NSF|4905|N-ethylmaleimide-sensitive factor	0.999163	CTCF.p2:-11:0.999
chr18	49473435	49473539	reg1032388.p1	4.174	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-749447	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-749775	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-750261	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	393054	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	393626	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2217505	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.0	
chr2	12857689	12857791	reg1033325.p1	4.174	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-487	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-970965	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-1047449	-	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	176	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	657	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	1915081	+	NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A	0.020905	
chr22	43008982	43009095	reg1037678.p1	4.174	+	AL157851 TSC_hg19_v1_chr22_-_42978018 BC014647 BC007736 BC053540 AK098201 BC143340	-30986	-	BC041802 AK294584 AL450314 NM_014509 AK295223 BC119650 BC119651 BC127635 BC127636 CR456455 AL589866 AL590118 AL590120 CU013005 CU013293	-59092	+	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	-93224	-	TSC_hg19_v1_chr22_-_43010884 BC001488 AB385492 AY506562 CU013006 CU013294 CU676456 AK291774 AK303419 AB055760 BC056912 AL137743 BC049840 AL160111 AL160112 AK291623	1825	-	CR456456 TSC_hg19_v1_chr22_-_43010893	1854	-	TSC_hg19_v1_chr22_-_43010902 AK024626 AK299751 BC019643	1875	-	AL157851|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC014647|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC007736|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC053540|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##AK098201|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##BC143340|RRP7B|91695|ribosomal RNA processing 7 homolog B (S. cerevisiae)##AK294584|SERHL2|253190|serine hydrolase-like 2##AL450314|SERHL2|253190|serine hydrolase-like 2##NM_014509|SERHL2|253190|serine hydrolase-like 2##AK295223|SERHL2|253190|serine hydrolase-like 2##BC119650|SERHL2|253190|serine hydrolase-like 2##BC119651|SERHL2|253190|serine hydrolase-like 2##BC127635|SERHL2|253190|serine hydrolase-like 2##BC127636|SERHL2|253190|serine hydrolase-like 2##CR456455|SERHL2|253190|serine hydrolase-like 2##AL589866|SERHL2|253190|serine hydrolase-like 2##AL590118|SERHL2|253190|serine hydrolase-like 2##AL590120|SERHL2|253190|serine hydrolase-like 2##CU013005|SERHL2|253190|serine hydrolase-like 2##CU013293|SERHL2|253190|serine hydrolase-like 2##BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC001488|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AY506562|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CU013006|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CU013294|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK291774|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK303419|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AB055760|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##BC056912|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL137743|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##BC049840|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL160111|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AL160112|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK291623|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##CR456456|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK024626|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##AK299751|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3##BC019643|POLDIP3|84271|polymerase (DNA-directed), delta interacting protein 3	0.087624	
chr2	62536965	62537145	reg1027456.p2	4.174	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-113789	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-404226	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-421269	-	BC047439 AK091902 AX747245 NM_198276	196484	-	AK292545 NM_001142615	363930	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	395911	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr9	69779271	69779383	reg1035791.p1	4.174	+	AL136793 NM_001098805	-397347	+	AF265442 BC069006 AK293173 NM_001085457	-516773	-	NM_001085476	-577124	-	NM_001126334	399487	-	NM_001099279 NM_199244	650403	-	CU688346 TSC_hg19_v1_chr9_-_70490092	710754	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.0	
chr13	27705414	27705579	reg1030946.p1	4.173	+	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	-370643	-	TSC_hg19_v1_chr13_+_27131892 AF454702	-573594	+	TSC_hg19_v1_chr13_+_27131854 AK289845 BC050283 NM_006646	-573662	+	DQ894074 AF022789 TSC_hg19_v1_chr13_-_27745948 AK289685	40365	-	TSC_hg19_v1_chr13_-_27746003 BC026072 NM_182488	40590	-	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	120246	+	AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12##AF454702|WASF3|10810|WAS protein family, member 3##AK289845|WASF3|10810|WAS protein family, member 3##BC050283|WASF3|10810|WAS protein family, member 3##NM_006646|WASF3|10810|WAS protein family, member 3##DQ894074|USP12|219333|ubiquitin specific peptidase 12##AF022789|USP12|219333|ubiquitin specific peptidase 12##AK289685|USP12|219333|ubiquitin specific peptidase 12##BC026072|USP12|219333|ubiquitin specific peptidase 12##NM_182488|USP12|219333|ubiquitin specific peptidase 12##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21	0.0	
chr16	4743276	4743457	reg1031025.p1	4.173	+	BC014199 TSC_hg19_v1_chr16_+_4714741	-28568	+	AB383902 CU690664 EF471397 EF471398 TSC_hg19_v1_chr16_+_4675003	-68378	+	TSC_hg19_v1_chr16_+_4674861 AK299052 BC050389 AB011116	-68504	+	AK315456 NM_001193452 NM_032349 TSC_hg19_v1_chr16_+_4743697	333	+	TSC_hg19_v1_chr16_+_4743721 BC006223 AK092642 AX747647 CU675299	352	+	TSC_hg19_v1_chr16_-_4784249 AK123496 NM_133450 BC031350 BC050387 AK123371 AK301683 NM_001242929	40899	-	BC014199|MGRN1|23295|mahogunin, ring finger 1##EF471397|MGRN1|23295|mahogunin, ring finger 1##EF471398|MGRN1|23295|mahogunin, ring finger 1##AK299052|MGRN1|23295|mahogunin, ring finger 1##BC050389|MGRN1|23295|mahogunin, ring finger 1##AB011116|MGRN1|23295|mahogunin, ring finger 1##AK315456|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##NM_001193452|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##NM_032349|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##BC006223|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##AK092642|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##AK123496|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##NM_133450|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##BC031350|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##BC050387|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##AK123371|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##AK301683|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##NM_001242929|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3	0.0	
chr2	238421264	238421444	reg1000062.p1	4.173	+	TSC_hg19_v1_chr2_+_238395893 NM_001042467 NM_024101 AK296745 AK022207 AK292929 AK310821 AK225381 BC001653 BC051269	-25458	+	TSC_hg19_v1_chr2_-_238322840 NM_004369 NM_057164 NM_057165 NM_057166 NM_057167	-98510	-	TSC_hg19_v1_chr2_-_238322815 X52022	-98533	-	AB015419 BC069081 BC069284 NM_015893	53862	+	TSC_hg19_v1_chr2_-_238499327 BC009827 BC050426 AL136645	77992	-	BC023661 AK225423 AK022600 NM_022449	78386	-	NM_001042467|MLPH|79083|melanophilin##NM_024101|MLPH|79083|melanophilin##AK296745|MLPH|79083|melanophilin##AK022207|MLPH|79083|melanophilin##AK292929|MLPH|79083|melanophilin##AK310821|MLPH|79083|melanophilin##AK225381|MLPH|79083|melanophilin##BC001653|MLPH|79083|melanophilin##BC051269|MLPH|79083|melanophilin##NM_004369|COL6A3|1293|collagen, type VI, alpha 3##NM_057164|COL6A3|1293|collagen, type VI, alpha 3##NM_057165|COL6A3|1293|collagen, type VI, alpha 3##NM_057166|COL6A3|1293|collagen, type VI, alpha 3##NM_057167|COL6A3|1293|collagen, type VI, alpha 3##X52022|COL6A3|1293|collagen, type VI, alpha 3##AB015419|PRLH|51052|prolactin releasing hormone##BC069081|PRLH|51052|prolactin releasing hormone##BC069284|PRLH|51052|prolactin releasing hormone##NM_015893|PRLH|51052|prolactin releasing hormone##BC009827|RAB17|64284|RAB17, member RAS oncogene family##BC050426|RAB17|64284|RAB17, member RAS oncogene family##AL136645|RAB17|64284|RAB17, member RAS oncogene family##BC023661|RAB17|64284|RAB17, member RAS oncogene family##AK225423|RAB17|64284|RAB17, member RAS oncogene family##AK022600|RAB17|64284|RAB17, member RAS oncogene family##NM_022449|RAB17|64284|RAB17, member RAS oncogene family	0.0	
chr5	133450064	133450188	reg1027893.p2	4.173	+	AK095989 NM_003374	-109303	-	TSC_hg19_v1_chr5_-_133340431 L06132	-109696	-	TSC_hg19_v1_chr5_-_133340397 BC071168 AK293639	-109725	-	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	393	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	1235	+	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	62497	-	AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##L06132|VDAC1|7416|voltage-dependent anion channel 1##BC071168|VDAC1|7416|voltage-dependent anion channel 1##AK293639|VDAC1|7416|voltage-dependent anion channel 1##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1	0.0	
chr8	103569446	103569596	reg1034093.p1	4.173	+	NM_024410 AK315276 BC104456 BC104457	-5660	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-144610	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-318348	-	BC011538 NM_001032282 S81439	96571	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	98411	-	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	306838	-	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1	0.0	
chr8	128562647	128562828	reg1034847.p1	4.173	+	DQ486513 NM_001159542	-134881	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-992013	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-992182	-	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	185588	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	185753	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	244046	+	DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)	0.0	
chrX	1587510	1587598	reg1025803.p2	4.173	+	AK301844 NM_001173473	-14903	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-15753	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-76585	-	BC043610 GQ280263 NM_178129 AK126147	68484	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	122975	+	NM_004043 U11090	126793	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.074226	
chr11	67889168	67889294	reg1038926.p1	4.172	+	NM_001277 NM_212469 TSC_hg19_v1_chr11_-_67888859	-343	-	D10704 BC036471 TSC_hg19_v1_chr11_-_67888844	-474	-	AF025374 NM_006053	-78785	+	TSC_hg19_v1_chr11_-_67981112 AF264782 BC002522 BC065287 BC087834 NM_016028 NM_017635 BC108304 AK314336 AK299201	91748	-	TSC_hg19_v1_chr11_-_68039418 AF264781	150155	-	TSC_hg19_v1_chr11_-_68039453 NM_022338	150227	-	NM_001277|CHKA|1119|choline kinase alpha##NM_212469|CHKA|1119|choline kinase alpha##D10704|CHKA|1119|choline kinase alpha##BC036471|CHKA|1119|choline kinase alpha##AF025374|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##NM_006053|TCIRG1|10312|T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3##AF264782|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC002522|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC065287|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC087834|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_016028|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_017635|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC108304|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK314336|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK299201|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AF264781|C11orf24|53838|chromosome 11 open reading frame 24##NM_022338|C11orf24|53838|chromosome 11 open reading frame 24	0.0	
chr13	47268326	47268421	reg1032109.p2	4.172	+	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-140866	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-140953	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	-141050	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	102942	-	AK314132 BX647777 AK302787 NM_000621 NM_001165947	202694	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1307078	-	HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.0	
chr14	71822808	71822963	reg1032853.p2	4.172	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-448434	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-448752	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-547076	-	AF090989 AF090990 NM_015556	173156	+	AK294895 NM_001204423	575931	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	576268	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.0	
chr15	74703437	74703529	reg1037058.p1	4.172	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-43480	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-44948	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-92578	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	22546	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	22829	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	49964	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.624643	CTCF.p2:20:0.625
chr17	72463953	72464085	reg1026070.p2	4.172	+	TSC_hg19_v1_chr17_+_72462821 AF161346 AJ010101 AJ010102 AJ010103 AJ238323 AK309636 BC020681 AB590938 CU689350	-1209	+	AF020314 TSC_hg19_v1_chr17_+_72462772	-1249	+	NM_007261 AJ224864 BC032352	-1481	+	AF427618 AY359025 TSC_hg19_v1_chr17_-_72527570 AY646929	63524	-	TSC_hg19_v1_chr17_-_72527597 DQ893585 DQ896833 BC028091 AK290925 AK298665 NM_174892	63583	-	X66171 TSC_hg19_v1_chr17_-_72542230	78170	-	AF161346|CD300A|11314|CD300a molecule##AJ010101|CD300A|11314|CD300a molecule##AJ010102|CD300A|11314|CD300a molecule##AJ010103|CD300A|11314|CD300a molecule##AJ238323|CD300A|11314|CD300a molecule##AK309636|CD300A|11314|CD300a molecule##BC020681|CD300A|11314|CD300a molecule##AF020314|CD300A|11314|CD300a molecule##NM_007261|CD300A|11314|CD300a molecule##AJ224864|CD300A|11314|CD300a molecule##BC032352|CD300A|11314|CD300a molecule##AF427618|CD300LB|124599|CD300 molecule-like family member b##AY359025|CD300LB|124599|CD300 molecule-like family member b##AY646929|CD300LB|124599|CD300 molecule-like family member b##DQ893585|CD300LB|124599|CD300 molecule-like family member b##DQ896833|CD300LB|124599|CD300 molecule-like family member b##BC028091|CD300LB|124599|CD300 molecule-like family member b##AK290925|CD300LB|124599|CD300 molecule-like family member b##AK298665|CD300LB|124599|CD300 molecule-like family member b##NM_174892|CD300LB|124599|CD300 molecule-like family member b##X66171|CD300C|10871|CD300c molecule	0.0	
chr1	82555940	82556036	reg1034097.p1	4.172	+	AF104266 AF104938 AF104939 NM_012302	-289907	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	-784061	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-3083561	-	AK097722 TSC_hg19_v1_chr1_-_84326308	1770280	-	TSC_hg19_v1_chr1_-_84326677 BC036594	1770688	-	AK126792 BC048970 BC032829 TSC_hg19_v1_chr1_-_84464848 BC060878 BC028350 NM_024686	1908808	-	AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK126792|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC048970|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC032829|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC060878|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##BC028350|TTLL7|79739|tubulin tyrosine ligase-like family, member 7##NM_024686|TTLL7|79739|tubulin tyrosine ligase-like family, member 7	0.0	
chr20	18448067	18448179	reg1021486.p2	4.172	+	TSC_hg19_v1_chr20_+_18448037 BC012588 BC016761 NM_006466 AK314838 AK096684 AK223298 AK290892 U93869 AB464048 DQ892695 DQ896169	-34	+	TSC_hg19_v1_chr20_-_18447678 CR749327 BC036231 BC130341 BC144153 AK295073 AK055544 AK299746 NM_001099407	-398	-	BC001887 NM_001083330 NM_003434 TSC_hg19_v1_chr20_+_18269170 AK295273 AK295513 AK291389 AK316386 AK294263 AK313525	-178956	+	AB464147 EU446767 AL832411 AF237576 BC020627 BC015938 NM_006606	29725	-	TSC_hg19_v1_chr20_+_18488207 NM_006363 NM_032985 NM_032986 NM_001172746	40098	+	X97065 AK296270 BC095404 TSC_hg19_v1_chr20_+_18488541 BC005032 BC001151	40412	+	BC012588|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##BC016761|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##NM_006466|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK314838|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK096684|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK223298|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##AK290892|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##U93869|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##DQ892695|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##DQ896169|POLR3F|10621|polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa##CR749327|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC036231|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC130341|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC144153|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK295073|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK055544|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##AK299746|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##NM_001099407|DZANK1|55184|double zinc ribbon and ankyrin repeat domains 1##BC001887|ZNF133|7692|zinc finger protein 133##NM_001083330|ZNF133|7692|zinc finger protein 133##NM_003434|ZNF133|7692|zinc finger protein 133##AK295273|ZNF133|7692|zinc finger protein 133##AK295513|ZNF133|7692|zinc finger protein 133##AK291389|ZNF133|7692|zinc finger protein 133##AK316386|ZNF133|7692|zinc finger protein 133##AK294263|ZNF133|7692|zinc finger protein 133##AK313525|ZNF133|7692|zinc finger protein 133##EU446767|RBBP9|10741|retinoblastoma binding protein 9##AL832411|RBBP9|10741|retinoblastoma binding protein 9##AF237576|RBBP9|10741|retinoblastoma binding protein 9##BC020627|RBBP9|10741|retinoblastoma binding protein 9##BC015938|RBBP9|10741|retinoblastoma binding protein 9##NM_006606|RBBP9|10741|retinoblastoma binding protein 9##NM_006363|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_032985|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_032986|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_001172746|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##X97065|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AK296270|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC095404|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC005032|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC001151|SEC23B|10483|Sec23 homolog B (S. cerevisiae)	0.0	
chr6	149069805	149069907	reg1008742.p6	4.172	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-1647	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-405665	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-405866	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	569247	+	AK315038 NM_015093 AK307650	569585	+	AY340238 NM_001002255 BC130305 HQ258040	651652	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.195953	
chr7	142153263	142153406	reg1033467.p1	4.172	+	AY358487 BC035384 AK122940 NM_001001317	-195473	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-341795	+	AF016833 NM_004668 BC120872	-457642	+	NM_001190487	220796	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	303992	+	M12426 TSC_hg19_v1_chr7_+_142495248	341861	+	AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	0.999695	CTCF.p2:-10:1.000
chr7	148177742	148177836	reg1030779.p1	4.172	+	TSC_hg19_v1_chr7_+_148036552 CR933671	-141224	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-2363905	+	NM_014141	-2364337	+	BC021251 NM_145304	109867	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	218151	+	TSC_hg19_v1_chr7_+_148396012 BX537409	218215	+	CR933671|CNTNAP2|26047|contactin associated protein-like 2##AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1##BX537409|CUL1|8454|cullin 1	0.833364	CTCF.p2:11:0.833
chr7	32204392	32204485	reg1027563.p2	4.172	+	AK094180 NM_001191059 U40371 NM_005020	-93427	-	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	-93933	-	NM_001145123 NM_006658	-477808	+	NM_001191058	133944	-	TSC_hg19_v1_chr7_-_32529998 AJ238097 AF182291 CU675199 AB463843 BC005938 AK022772 AK024217 NM_012322	325559	-	NM_001130710 NM_001139499	330431	-	AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_001191058|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AJ238097|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182291|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC005938|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK022772|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK024217|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012322|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001130710|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001139499|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.024773	
chr7	65200126	65200227	reg1034862.p2	4.172	+	TSC_hg19_v1_chr7_+_64838793 AK091618 AX747097 BC036439 M61872	-361369	+	TSC_hg19_v1_chr7_+_64838761 BX647875 NM_007139 NM_152626 BC040594	-361426	+	TSC_hg19_v1_chr7_+_64601445 AK057766	-598656	+	TSC_hg19_v1_chr7_-_65215912 BX647963	15742	-	TSC_hg19_v1_chr7_+_65216060 BC052238 BC073761 BC122874 BC119782	15907	+	TSC_hg19_v1_chr7_-_65235746 BC066990	35569	-	AK091618|ZNF92|168374|zinc finger protein 92##BC036439|ZNF92|168374|zinc finger protein 92##M61872|ZNF92|168374|zinc finger protein 92##BX647875|ZNF92|168374|zinc finger protein 92##NM_007139|ZNF92|168374|zinc finger protein 92##NM_152626|ZNF92|168374|zinc finger protein 92##BC040594|ZNF92|168374|zinc finger protein 92##AK057766|INTS4L1|285905|integrator complex subunit 4-like 1##BC052238|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC073761|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC122874|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC119782|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC066990|LOC441242|441242|uncharacterized LOC441242	0.017865	
chr7	75047904	75048000	reg1035698.p2	4.172	+	AK126486 TSC_hg19_v1_chr7_+_75039644 BC044928 BC103750	-8298	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	-22987	+	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	-59382	+	AB354586 TSC_hg19_v1_chr7_-_75072021	24059	-	TSC_hg19_v1_chr7_-_75115568 BC082993 NM_001099415	67617	-	NM_001099435	76346	+	AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC044928|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC103750|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##AB354586|POM121C|100101267|POM121 membrane glycoprotein C##BC082993|POM121C|100101267|POM121 membrane glycoprotein C##NM_001099415|POM121C|100101267|POM121 membrane glycoprotein C##NM_001099435|SPDYE5|442590|speedy homolog E5 (Xenopus laevis)	0.997129	CTCF.p2:-1:0.997
chr9	130673093	130673214	reg1025914.p1	4.172	+	TSC_hg19_v1_chr9_-_130667604 AY358672 AK124217 AK310850	-5538	-	TSC_hg19_v1_chr9_-_130661892 BC036102	-11243	-	TSC_hg19_v1_chr9_-_130661883 AK023900	-11274	-	BC036705 TSC_hg19_v1_chr9_-_130679297 AK292049 AK000600 NM_175039 NM_175040	6107	-	TSC_hg19_v1_chr9_-_130689700 BC042184 NM_173492	16580	-	NM_001135219	19922	-	AY358672|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK124217|LOC100131355|100131355|uncharacterized LOC100131355##AK310850|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC036102|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK023900|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC036705|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AK292049|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AK000600|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##NM_175039|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##NM_175040|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##BC042184|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##NM_173492|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##NM_001135219|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1	0.212811	CTCF.p2:21:0.213
chr11	64037241	64037367	reg1035688.p1	4.171	+	TSC_hg19_v1_chr11_+_64019017 BC146645 BC142681 BC032659 AB385031	-18247	+	TSC_hg19_v1_chr11_+_64018991 NM_000932 NM_001184883 Z26649	-18311	+	TSC_hg19_v1_chr11_-_64014411 NM_138689	-22889	-	AK300209 NM_001170726	14506	+	TSC_hg19_v1_chr11_-_64052127 BC095431	14828	-	TSC_hg19_v1_chr11_-_64052166 AK303051 AK291863 AK309150 NM_004322 NM_032989	14886	-	BC146645|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##BC142681|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##BC032659|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##AB385031|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##NM_000932|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##NM_001184883|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##Z26649|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##NM_138689|PPP1R14B|26472|protein phosphatase 1, regulatory (inhibitor) subunit 14B##AK300209|GPR137|56834|G protein-coupled receptor 137##NM_001170726|GPR137|56834|G protein-coupled receptor 137##BC095431|BAD|572|BCL2-associated agonist of cell death##AK303051|BAD|572|BCL2-associated agonist of cell death##AK291863|BAD|572|BCL2-associated agonist of cell death##AK309150|BAD|572|BCL2-associated agonist of cell death##NM_004322|BAD|572|BCL2-associated agonist of cell death##NM_032989|BAD|572|BCL2-associated agonist of cell death	0.0	
chr1	206857282	206857415	reg1032241.p1	4.171	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-48238	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	-48504	+	TSC_hg19_v1_chr1_-_206785905 NM_001201478 NM_006893	-71465	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	1123	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	88531	-	AY040367 NM_153758 AB463800	114878	+	BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001201478|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_006893|EIF2D|1939|eukaryotic translation initiation factor 2D##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19	0.0	
chr15	70779151	70779264	reg1028546.p2	4.171	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-388964	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-388980	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-437298	-	TSC_hg19_v1_chr15_-_70878946 BC040579	99737	-	BC016881 AL834243 NM_001008224 AK055435	215420	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	276635	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.0	
chr19	43929913	43930042	reg1037013.p2	4.171	+	NM_001130011 AY014285 AY359077	-10927	+	AF241268 NM_031451	-37215	+	NM_020406 AF146747 AK290965 TSC_hg19_v1_chr19_+_43857837 AJ290452 AJ310433 AK225226 AM884905 BC029167 AY358932 AB237911 AB527936 CU688610 DQ892045 DQ895239 AJ305326 BT020111	-72132	+	CU691666 AY359006 BC041061 BC039167 AJ223603 AK075464 AK290905 AK314773 AF082889 NM_014400	39799	-	BC029299 NM_198850 BC070094	79058	-	TSC_hg19_v1_chr19_-_44031351 AM392804 AB463613 AK309880 BC008250 AK315346 D83198 NM_014297	101384	-	NM_001130011|TEX101|83639|testis expressed 101##AY014285|TEX101|83639|testis expressed 101##AY359077|TEX101|83639|testis expressed 101##AF241268|TEX101|83639|testis expressed 101##NM_031451|TEX101|83639|testis expressed 101##NM_020406|CD177|57126|CD177 molecule##AF146747|CD177|57126|CD177 molecule##AK290965|CD177|57126|CD177 molecule##AJ290452|CD177|57126|CD177 molecule##AJ310433|CD177|57126|CD177 molecule##AK225226|CD177|57126|CD177 molecule##AM884905|CD177|57126|CD177 molecule##BC029167|CD177|57126|CD177 molecule##AY358932|CD177|57126|CD177 molecule##AB237911|CD177|57126|CD177 molecule##DQ892045|CD177|57126|CD177 molecule##DQ895239|CD177|57126|CD177 molecule##AJ305326|CD177|57126|CD177 molecule##BT020111|CD177|57126|CD177 molecule##AY359006|LYPD3|27076|LY6/PLAUR domain containing 3##BC041061|LYPD3|27076|LY6/PLAUR domain containing 3##BC039167|LYPD3|27076|LY6/PLAUR domain containing 3##AJ223603|LYPD3|27076|LY6/PLAUR domain containing 3##AK075464|LYPD3|27076|LY6/PLAUR domain containing 3##AK290905|LYPD3|27076|LY6/PLAUR domain containing 3##AK314773|LYPD3|27076|LY6/PLAUR domain containing 3##AF082889|LYPD3|27076|LY6/PLAUR domain containing 3##NM_014400|LYPD3|27076|LY6/PLAUR domain containing 3##BC029299|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##NM_198850|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##BC070094|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##AM392804|ETHE1|23474|ethylmalonic encephalopathy 1##AK309880|ETHE1|23474|ethylmalonic encephalopathy 1##BC008250|ETHE1|23474|ethylmalonic encephalopathy 1##AK315346|ETHE1|23474|ethylmalonic encephalopathy 1##D83198|ETHE1|23474|ethylmalonic encephalopathy 1##NM_014297|ETHE1|23474|ethylmalonic encephalopathy 1	0.0	
chr4	33161914	33162037	reg1030413.p1	4.171	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-2439516	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-2439781	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-2439976	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	3084062	-	AK131492 NM_001136536 AK304357 AK316523	3121271	+	BC157885 NM_001170700	3123668	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	1.23558	CTCF.p2:-7:0.976	CTCF.p2:-80:0.259
chrX	36916461	36916606	reg1034709.p1	4.171	+	NM_001098843	-662483	+	AK093920 AX748365 NM_173695	-851481	+	NM_152632 AK126295 BC027936 CU693328	-978651	+	NM_001013736	109898	+	NM_000950 NM_001142395 NM_001173486 BC030786 TSC_hg19_v1_chrX_+_37208616 BC012608 NM_001173489 NM_001173490 AK312904 BC060833 AF009242 BC041591	292055	+	AK124915 NM_001170331 NM_198511 TSC_hg19_v1_chrX_+_37430917	514337	+	NM_001098843|CXorf30|645090|chromosome X open reading frame 30##AK093920|CXorf59|286464|chromosome X open reading frame 59##NM_173695|CXorf59|286464|chromosome X open reading frame 59##NM_152632|CXorf22|170063|chromosome X open reading frame 22##AK126295|CXorf22|170063|chromosome X open reading frame 22##BC027936|CXorf22|170063|chromosome X open reading frame 22##NM_001013736|FAM47C|442444|family with sequence similarity 47, member C##NM_000950|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001142395|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173486|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC030786|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC012608|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173489|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##NM_001173490|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AK312904|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC060833|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AF009242|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##BC041591|PRRG1|5638|proline rich Gla (G-carboxyglutamic acid) 1##AK124915|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_001170331|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_198511|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)	0.996819	CTCF.p2:35:0.997
chr1	24285499	24285622	reg1032782.p1	4.170	+	BC069722 NM_001841 X74328 FJ357036	-45756	-	CU675950 TSC_hg19_v1_chr1_-_24194781 M29877 AB074175 AK092914 AK095443 AK095455 AK225468 AK301302 AK310143 AK314649 AX747804 BC017338 AK295535 NM_000147	-90751	-	TSC_hg19_v1_chr1_-_24151934 NM_000191 NM_001166059	-133612	-	NM_017761 TSC_hg19_v1_chr1_+_24286310	745	+	TSC_hg19_v1_chr1_+_24286317 AF151042 AK300522 BC068475 AK311305 BC001959 BC085018 BC078177 AF374386	786	+	TSC_hg19_v1_chr1_-_24306818 AF449427 CU674556 AB528881 AY150180 AY150181 AF047448 AF067730 AY007101 BC010074 BC005039 AK001286 AK001656 BC071575 AF419331	21223	-	BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)##NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)##X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)##M29877|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AB074175|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK092914|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095443|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095455|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK225468|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK301302|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK310143|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK314649|FUCA1|2517|fucosidase, alpha-L- 1, tissue##BC017338|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK295535|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000147|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000191|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_001166059|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF449427|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150180|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150181|SRSF10|10772|serine/arginine-rich splicing factor 10##AF047448|SRSF10|10772|serine/arginine-rich splicing factor 10##AF067730|SRSF10|10772|serine/arginine-rich splicing factor 10##AY007101|SRSF10|10772|serine/arginine-rich splicing factor 10##BC010074|SRSF10|10772|serine/arginine-rich splicing factor 10##BC005039|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001286|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001656|SRSF10|10772|serine/arginine-rich splicing factor 10##BC071575|SRSF10|10772|serine/arginine-rich splicing factor 10##AF419331|SRSF10|10772|serine/arginine-rich splicing factor 10	0.0	
chr13	80604759	80604915	reg1029330.p2	4.170	+	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-549282	+	TSC_hg19_v1_chr13_+_80055411 AK297197 AK001723	-549415	+	TSC_hg19_v1_chr13_+_80055257 NM_001161407 NM_019080 AB097019 AB097028 AB097029	-549566	+	BC004205 TSC_hg19_v1_chr13_-_80913114	308205	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	310227	-	TSC_hg19_v1_chr13_-_84456424 BC051738	3851588	-	AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##AK297197|NDFIP2|54602|Nedd4 family interacting protein 2##AK001723|NDFIP2|54602|Nedd4 family interacting protein 2##NM_001161407|NDFIP2|54602|Nedd4 family interacting protein 2##NM_019080|NDFIP2|54602|Nedd4 family interacting protein 2##AB097019|NDFIP2|54602|Nedd4 family interacting protein 2##AB097028|NDFIP2|54602|Nedd4 family interacting protein 2##AB097029|NDFIP2|54602|Nedd4 family interacting protein 2##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1	0.794605	CTCF.p2:-14:0.795
chr15	101439070	101439159	reg1045335.p1	4.170	+	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-19043	+	TSC_hg19_v1_chr15_+_101420006 NM_000693	-19108	+	TSC_hg19_v1_chr15_+_101390032 AK056534	-49081	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	20360	-	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	20398	+	AB071402 TSC_hg19_v1_chr15_-_101791795	352622	-	AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##NM_000693|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK056534|LOC145757|145757|uncharacterized LOC145757##NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AB071402|CHSY1|22856|chondroitin sulfate synthase 1	0.953943	CTCF.p2:-67:0.954
chr15	78858335	78858465	reg1031886.p1	4.170	+	TSC_hg19_v1_chr15_+_78857888 NM_000745 BC033639 U62434 AF385586 M83712 CU689678 DQ893355 DQ896674 EU176798 Y08419	-456	+	TSC_hg19_v1_chr15_+_78832790 D28362 BC030529 AL110100 BC022445 BC093069 BC047667 D00763	-25584	+	NM_001102667 NM_001102668 NM_002789 TSC_hg19_v1_chr15_+_78832785 BC005361 AK055714 AK315526	-25635	+	AF385584 Y08418 BT006646 BT006897 CU674246 CU675253 M86383 M37981 TSC_hg19_v1_chr15_-_78913298 BC000513 BC001642 BC002996 U62432	54833	-	TSC_hg19_v1_chr15_-_78913532 BC098443 BC006114 NM_000743 NM_001166694	55172	-	TSC_hg19_v1_chr15_-_78933573 U62439 Y08416 BC096080 BC096081 BC096082 BC096083 NM_000750 U48861	75173	-	NM_000745|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##BC033639|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##U62434|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##AF385586|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##M83712|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##DQ893355|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##DQ896674|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##EU176798|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##Y08419|CHRNA5|1138|cholinergic receptor, nicotinic, alpha 5##D28362|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC030529|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##AL110100|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC022445|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC093069|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC047667|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##D00763|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##NM_001102667|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##NM_001102668|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##NM_002789|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##BC005361|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##AK055714|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##AK315526|PSMA4|5685|proteasome (prosome, macropain) subunit, alpha type, 4##AF385584|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##Y08418|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006646|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006897|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##M37981|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC000513|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC001642|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC002996|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##U62432|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC098443|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC006114|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_000743|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_001166694|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##U62439|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##Y08416|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096080|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096081|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096082|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096083|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##NM_000750|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##U48861|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4	0.0	
chr22	50364502	50364618	reg1031277.p2	4.170	+	TSC_hg19_v1_chr22_+_50354433 AK292005 BC141855 BC052239 AB528933 BC140030	-10049	+	TSC_hg19_v1_chr22_+_50354140 NM_001001852 AB114795	-10411	+	TSC_hg19_v1_chr22_+_50312337 BC050675 DQ470678 AK225930 AY358355 BC002894 DQ470676 DQ470677 DQ470680 AJ968414	-52185	+	NM_001001694 AK123987	86510	-	TSC_hg19_v1_chr22_-_50523682 AK294048	159132	-	BC028425 BC070042 TSC_hg19_v1_chr22_-_50523742	159179	-	AK292005|PIM3|415116|pim-3 oncogene##BC141855|PIM3|415116|pim-3 oncogene##BC052239|PIM3|415116|pim-3 oncogene##BC140030|PIM3|415116|pim-3 oncogene##NM_001001852|PIM3|415116|pim-3 oncogene##AB114795|PIM3|415116|pim-3 oncogene##BC050675|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470678|CRELD2|79174|cysteine-rich with EGF-like domains 2##AK225930|CRELD2|79174|cysteine-rich with EGF-like domains 2##AY358355|CRELD2|79174|cysteine-rich with EGF-like domains 2##BC002894|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470676|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470677|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470680|CRELD2|79174|cysteine-rich with EGF-like domains 2##AJ968414|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_001001694|IL17REL|400935|interleukin 17 receptor E-like##AK123987|IL17REL|400935|interleukin 17 receptor E-like##AK294048|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1##BC028425|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1##BC070042|MLC1|23209|megalencephalic leukoencephalopathy with subcortical cysts 1	0.0	
chr2	7058913	7059012	reg1029163.p1	4.170	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1375	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-41099	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-52259	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1763241	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1918757	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	2084859	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.250113	CTCF.p2:-10:0.250
chr6	161211182	161211334	reg1032630.p2	4.170	+	NM_000301 NM_001168338 AK308036 AK312966 AK298338 X05199 M74220 BC060513	-87997	+	NM_005577	-123852	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	-441864	+	TSC_hg19_v1_chr6_+_161412797 BC146770 D86968	201484	+	TSC_hg19_v1_chr6_+_161412815 AF002715 NM_005922 NM_006724	201556	+	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	201600	+	NM_000301|PLG|5340|plasminogen##NM_001168338|PLG|5340|plasminogen##AK308036|PLG|5340|plasminogen##AK312966|PLG|5340|plasminogen##AK298338|PLG|5340|plasminogen##X05199|PLG|5340|plasminogen##M74220|PLG|5340|plasminogen##BC060513|PLG|5340|plasminogen##NM_005577|LPA|4018|lipoprotein, Lp(a)##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##BC146770|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##D86968|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AF002715|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_005922|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_006724|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4	0.639431	CTCF.p2:-60:0.639
chr8	54108352	54108420	reg1031204.p1	4.170	+	BC069117 BC107101 NM_005285	-255919	+	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	-481373	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	-481400	-	BC099912 AK310407 AY168006 NM_000912 AY466378	55826	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	647293	-	AK022345 TSC_hg19_v1_chr8_-_54755834	647441	-	BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1##BC099912|OPRK1|4986|opioid receptor, kappa 1##AK310407|OPRK1|4986|opioid receptor, kappa 1##AY168006|OPRK1|4986|opioid receptor, kappa 1##NM_000912|OPRK1|4986|opioid receptor, kappa 1##AY466378|OPRK1|4986|opioid receptor, kappa 1##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H	0.0	
chr9	74980384	74980539	reg1031827.p2	4.170	+	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	-361	-	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	-736	-	TSC_hg19_v1_chr9_+_74920350 AK095210	-60110	+	AF417578 NM_138691	156255	+	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	587484	-	NM_000689	587771	-	AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	0.0	
chr1	12113179	12113318	reg1024324.p1	4.169	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-33678	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-33714	+	FJ618905 NM_021933	-33950	+	M83554 NM_001243 BC136400 BC171762 S75768	10296	+	D86042 BC063482 NM_152942 BC073839 BC141804	72768	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	113813	+	AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.014696	
chr12	121951859	121951933	reg1028817.p1	4.169	+	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	-46822	-	AF306709 TSC_hg19_v1_chr12_+_121837931 NM_025126 NM_194271 AK025439 AK225285 AK304366 BC007826 BC039029 BC046174 BC029038	-113932	+	AK025614 NM_001137559	-159885	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	66363	-	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	67018	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	112747	+	BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##AF306709|RNF34|80196|ring finger protein 34##NM_025126|RNF34|80196|ring finger protein 34##NM_194271|RNF34|80196|ring finger protein 34##AK025439|RNF34|80196|ring finger protein 34##AK225285|RNF34|80196|ring finger protein 34##BC007826|RNF34|80196|ring finger protein 34##BC039029|RNF34|80196|ring finger protein 34##BC046174|RNF34|80196|ring finger protein 34##AK025614|ANAPC5|51433|anaphase promoting complex subunit 5##NM_001137559|ANAPC5|51433|anaphase promoting complex subunit 5##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1	0.0	
chr12	63462754	63462895	reg1039345.p1	4.169	+	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	-133899	-	TSC_hg19_v1_chr12_-_63328666 NM_020700 BC157843	-134119	-	BC136288 AK098456 NM_175895	-465614	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	81847	-	NM_000706	83765	-	BC125215 BC125216 TSC_hg19_v1_chr12_-_64062283 AY358792 AL833344 AK310102 AK057511 BC068442 NM_173812	599472	-	BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##NM_020700|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC157843|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC136288|C12orf61|283416|chromosome 12 open reading frame 61##AK098456|C12orf61|283416|chromosome 12 open reading frame 61##NM_175895|C12orf61|283416|chromosome 12 open reading frame 61##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A##NM_000706|AVPR1A|552|arginine vasopressin receptor 1A##BC125215|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC125216|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AY358792|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AL833344|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK310102|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK057511|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC068442|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_173812|DPY19L2|283417|dpy-19-like 2 (C. elegans)	0.579532	CTCF.p2:4:0.580
chr19	30081353	30081427	reg1032868.p1	4.169	+	NM_001146339	-63900	+	TSC_hg19_v1_chr19_-_29704107 NM_006003	-377269	-	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	-377330	-	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	15799	+	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	74959	+	TSC_hg19_v1_chr19_+_30156375 AK225814	75031	+	NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1	0.010076	
chr8	59231088	59231191	reg1037108.p2	4.169	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-323982	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1324713	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1324737	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	92746	+	X56088 M93133 BC101777 BC112184 NM_000780	181568	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	234613	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.122398	
chr9	15485961	15486111	reg1041542.p1	4.169	+	TSC_hg19_v1_chr9_+_15422877 AB527501 EU446705 BC014985	-63124	+	TSC_hg19_v1_chr9_+_15422873 BC121011 BC121012 U66413 BC108743 U71300 AK293310	-63168	+	TSC_hg19_v1_chr9_+_15422741 BC036031 NM_001039697	-63328	+	AF098483 AF098482 NM_021144	24211	-	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	24924	-	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	66985	+	EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC121011|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC121012|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##U66413|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC108743|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##U71300|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##AK293310|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC036031|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##NM_001039697|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93	0.741016	CTCF.p2:-15:0.741
chr11	134146053	134146178	reg1026088.p1	4.168	+	AF126245 AK309838 NM_014384 TSC_hg19_v1_chr11_+_134123461 AK299492 AK301921 AK299795 AK074640 AK000359 AK315980 AK125373 BC001964 AK303569 AK309051 AK309051 CU674960 DQ891093 DQ894275	-22665	+	AK308498 AK308498 AF182413 TSC_hg19_v1_chr11_-_134123259 AF161493 AF059619 BC093074 AK311024 BC006978 NM_001037304 NM_001037305 NM_014174 NM_199297 NM_199298	-22916	-	TSC_hg19_v1_chr11_+_134094573 BC014128 BC009747	-51507	+	BC011001 NM_001080407	159	+	NM_138342 BC040641 BC040641 AK074703 AK074703 TSC_hg19_v1_chr11_+_134201886 AY358497 AY358497	55713	+	AK074855 AK074855 TSC_hg19_v1_chr11_+_134201905 AK074947 AK074947	55805	+	AF126245|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK309838|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##NM_014384|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK299492|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK301921|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK299795|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK074640|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK000359|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK125373|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##BC001964|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK303569|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK309051|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK309051|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##DQ891093|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##DQ894275|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK308498|THYN1|29087|thymocyte nuclear protein 1##AK308498|THYN1|29087|thymocyte nuclear protein 1##AF182413|THYN1|29087|thymocyte nuclear protein 1##AF161493|THYN1|29087|thymocyte nuclear protein 1##AF059619|THYN1|29087|thymocyte nuclear protein 1##BC093074|THYN1|29087|thymocyte nuclear protein 1##AK311024|THYN1|29087|thymocyte nuclear protein 1##BC006978|THYN1|29087|thymocyte nuclear protein 1##NM_001037304|THYN1|29087|thymocyte nuclear protein 1##NM_001037305|THYN1|29087|thymocyte nuclear protein 1##NM_014174|THYN1|29087|thymocyte nuclear protein 1##NM_199297|THYN1|29087|thymocyte nuclear protein 1##NM_199298|THYN1|29087|thymocyte nuclear protein 1##BC014128|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##BC009747|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##BC011001|GLB1L3|112937|galactosidase, beta 1-like 3##NM_001080407|GLB1L3|112937|galactosidase, beta 1-like 3##NM_138342|GLB1L2|89944|galactosidase, beta 1-like 2##BC040641|GLB1L2|89944|galactosidase, beta 1-like 2##BC040641|GLB1L2|89944|galactosidase, beta 1-like 2##AK074703|GLB1L2|89944|galactosidase, beta 1-like 2##AK074703|GLB1L2|89944|galactosidase, beta 1-like 2##AY358497|GLB1L2|89944|galactosidase, beta 1-like 2##AY358497|GLB1L2|89944|galactosidase, beta 1-like 2##AK074855|GLB1L2|89944|galactosidase, beta 1-like 2##AK074855|GLB1L2|89944|galactosidase, beta 1-like 2##AK074947|GLB1L2|89944|galactosidase, beta 1-like 2##AK074947|GLB1L2|89944|galactosidase, beta 1-like 2	0.010049	
chr11	78127743	78127897	reg1005489.p1	4.168	+	AB011143 BC152459 NM_012296	-74895	-	AK056231 NM_020798 AK301048 AK307875 TSC_hg19_v1_chr11_+_77899953	-227895	+	TSC_hg19_v1_chr11_-_77899673 AK300320 BC036058 NM_001029859 AK095233	-228164	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	986	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	1056	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	157972	-	AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##AK056231|USP35|57558|ubiquitin specific peptidase 35##NM_020798|USP35|57558|ubiquitin specific peptidase 35##AK301048|USP35|57558|ubiquitin specific peptidase 35##AK307875|USP35|57558|ubiquitin specific peptidase 35##AK300320|KCTD21|283219|potassium channel tetramerisation domain containing 21##BC036058|KCTD21|283219|potassium channel tetramerisation domain containing 21##NM_001029859|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK095233|KCTD21|283219|potassium channel tetramerisation domain containing 21##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##NM_080491|GAB2|9846|GRB2-associated binding protein 2##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)	0.0	
chr1	192486248	192486371	reg1022477.p2	4.168	+	AY643711 NM_001039152	-200188	+	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	-358706	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	-2039574	-	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	58599	+	NM_002927 NM_144766 AF030107 BC016667	118975	+	BC042755 BC044742 NM_002923 TSC_hg19_v1_chr1_+_192778168 AK313668 BC007049 L13463 AY971351 AB528517 AF493926 BT007065 CR457410 CU675517 DQ893178 DQ896478	291875	+	AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1##NM_002927|RGS13|6003|regulator of G-protein signaling 13##NM_144766|RGS13|6003|regulator of G-protein signaling 13##AF030107|RGS13|6003|regulator of G-protein signaling 13##BC016667|RGS13|6003|regulator of G-protein signaling 13##BC042755|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC044742|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002923|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AK313668|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC007049|RGS2|5997|regulator of G-protein signaling 2, 24kDa##L13463|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AY971351|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AF493926|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT007065|RGS2|5997|regulator of G-protein signaling 2, 24kDa##CR457410|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ893178|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ896478|RGS2|5997|regulator of G-protein signaling 2, 24kDa	0.0	
chr1	2460507	2460642	reg1034902.p1	4.168	+	TSC_hg19_v1_chr1_-_2458040 AL442072 BC043496 AK001644 AK223546 AK303127 AK309860 NM_018216 AK295301	-2510	-	DQ176850 NM_014638 BC144620	-52817	+	TSC_hg19_v1_chr1_-_2344008 AB013818 NM_002617 NM_153818	-116562	-	BC087840 DQ272660 NM_001010926	1109	-	AK300515 NM_003820 U70321 AK303468 BC029848 BC002794 BC018882 U81232 AF153978 AK310076 AB208808 AY358879 CU678202 AB590572 DQ893000 DQ896755 AF373877 AF373878 CR456909	27379	+	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	57614	+	AL442072|PANK4|55229|pantothenate kinase 4##BC043496|PANK4|55229|pantothenate kinase 4##AK001644|PANK4|55229|pantothenate kinase 4##AK223546|PANK4|55229|pantothenate kinase 4##AK303127|PANK4|55229|pantothenate kinase 4##AK309860|PANK4|55229|pantothenate kinase 4##NM_018216|PANK4|55229|pantothenate kinase 4##AK295301|PANK4|55229|pantothenate kinase 4##DQ176850|PLCH2|9651|phospholipase C, eta 2##NM_014638|PLCH2|9651|phospholipase C, eta 2##BC144620|PLCH2|9651|phospholipase C, eta 2##AB013818|PEX10|5192|peroxisomal biogenesis factor 10##NM_002617|PEX10|5192|peroxisomal biogenesis factor 10##NM_153818|PEX10|5192|peroxisomal biogenesis factor 10##BC087840|HES5|388585|hairy and enhancer of split 5 (Drosophila)##DQ272660|HES5|388585|hairy and enhancer of split 5 (Drosophila)##NM_001010926|HES5|388585|hairy and enhancer of split 5 (Drosophila)##AK300515|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##NM_003820|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U70321|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK303468|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC029848|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC002794|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC018882|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U81232|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF153978|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK310076|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AB208808|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AY358879|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ893000|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ896755|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373877|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373878|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##CR456909|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B	0.0	
chr1	40105686	40105765	reg1033337.p1	4.168	+	TSC_hg19_v1_chr1_-_40105343 NM_014571	-380	-	AF311885 EU446871 TSC_hg19_v1_chr1_-_40105307 AB463718 AJ272215 BC006087	-409	-	TSC_hg19_v1_chr1_-_40098640 AK300463	-7070	-	AF331801 AY028778 BC103879 BC103880 NM_032526	31984	-	TSC_hg19_v1_chr1_-_40157103 BC030827 AL136591 NM_016257 AK294412 AK312314 AK294813	51377	-	NM_001195007 NM_006112 NM_203456 TSC_hg19_v1_chr1_+_40204553 AK313666 BC008451 AL833576 AF104012 AF104013 AK094660 AK304694 BC107736	98813	+	NM_014571|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AF311885|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##EU446871|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AJ272215|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##BC006087|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AK300463|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AF331801|NT5C1A|84618|5'-nucleotidase, cytosolic IA##AY028778|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC103879|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC103880|NT5C1A|84618|5'-nucleotidase, cytosolic IA##NM_032526|NT5C1A|84618|5'-nucleotidase, cytosolic IA##BC030827|HPCAL4|51440|hippocalcin like 4##AL136591|HPCAL4|51440|hippocalcin like 4##NM_016257|HPCAL4|51440|hippocalcin like 4##AK294412|HPCAL4|51440|hippocalcin like 4##AK312314|HPCAL4|51440|hippocalcin like 4##AK294813|HPCAL4|51440|hippocalcin like 4##NM_001195007|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_006112|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_203456|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK313666|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC008451|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AL833576|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104012|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104013|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK094660|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK304694|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC107736|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)	0.200612	CTCF.p2:-6:0.201
chr19	18682293	18682473	reg1030624.p1	4.168	+	TSC_hg19_v1_chr19_+_18668679 AF173381	-13709	+	NM_001171948 NM_001171949 NM_024069 TSC_hg19_v1_chr19_+_18668584 AK125365 AK098346 BC001080 BC006479	-13773	+	TSC_hg19_v1_chr19_-_18654384 BX538124 BX647405 GQ372970 NM_012181	-28001	-	NM_001033930 NM_003333 TSC_hg19_v1_chr19_+_18682666 AF348700 BC101830 BC101832 BC143668 D28425 AK314717	274	+	NM_001100418 NM_001100419 TSC_hg19_v1_chr19_+_18699611 BC012078 AK000857 AK091925 AX747258 AK054670	17184	+	EU832355 EU832440 AF178684 TSC_hg19_v1_chr19_-_18717548	35137	-	AF173381|KXD1|79036|KxDL motif containing 1##NM_001171948|KXD1|79036|KxDL motif containing 1##NM_001171949|KXD1|79036|KxDL motif containing 1##NM_024069|KXD1|79036|KxDL motif containing 1##AK125365|KXD1|79036|KxDL motif containing 1##AK098346|KXD1|79036|KxDL motif containing 1##BC001080|KXD1|79036|KxDL motif containing 1##BC006479|KXD1|79036|KxDL motif containing 1##BX538124|FKBP8|23770|FK506 binding protein 8, 38kDa##BX647405|FKBP8|23770|FK506 binding protein 8, 38kDa##GQ372970|FKBP8|23770|FK506 binding protein 8, 38kDa##NM_012181|FKBP8|23770|FK506 binding protein 8, 38kDa##NM_001033930|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##NM_003333|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##AF348700|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##BC101830|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##BC101832|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##BC143668|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##AK314717|UBA52|7311|ubiquitin A-52 residue ribosomal protein fusion product 1##NM_001100418|C19orf60|55049|chromosome 19 open reading frame 60##NM_001100419|C19orf60|55049|chromosome 19 open reading frame 60##BC012078|C19orf60|55049|chromosome 19 open reading frame 60##AK000857|C19orf60|55049|chromosome 19 open reading frame 60##AK091925|C19orf60|55049|chromosome 19 open reading frame 60##AK054670|C19orf60|55049|chromosome 19 open reading frame 60##EU832355|CRLF1|9244|cytokine receptor-like factor 1##EU832440|CRLF1|9244|cytokine receptor-like factor 1##AF178684|CRLF1|9244|cytokine receptor-like factor 1	0.0	
chr21	43722751	43722883	reg1032413.p2	4.168	+	TSC_hg19_v1_chr21_+_43710190 AF038175	-12604	+	AK298491 AF323664 NM_207174	-82849	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	-83524	+	L08044 DQ891963 DQ895153 L15203 BC017859 TSC_hg19_v1_chr21_-_43735520	12674	-	NM_003226 AF432265	12915	-	X51698 BC032820 NM_005423	48321	-	AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK298491|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323664|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207174|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##L08044|TFF3|7033|trefoil factor 3 (intestinal)##DQ891963|TFF3|7033|trefoil factor 3 (intestinal)##DQ895153|TFF3|7033|trefoil factor 3 (intestinal)##L15203|TFF3|7033|trefoil factor 3 (intestinal)##BC017859|TFF3|7033|trefoil factor 3 (intestinal)##NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2	0.0	
chr3	142759237	142759347	reg1032200.p1	4.168	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-38862	+	TSC_hg19_v1_chr3_+_142682794 BC062727	-76462	+	AK123932 BC118666 BC122527 NM_198504 AY424287	-77077	-	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	79359	+	BC067737 TSC_hg19_v1_chr3_+_142895211	135879	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	807975	-	NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC062727|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK123932|PAQR9|344838|progestin and adipoQ receptor family member IX##BC118666|PAQR9|344838|progestin and adipoQ receptor family member IX##BC122527|PAQR9|344838|progestin and adipoQ receptor family member IX##NM_198504|PAQR9|344838|progestin and adipoQ receptor family member IX##AY424287|PAQR9|344838|progestin and adipoQ receptor family member IX##NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	0.288505	CTCF.p2:7:0.289
chr6	11495054	11495120	reg1028033.p1	4.168	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-112547	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-262177	-	L43821 TSC_hg19_v1_chr6_-_11232900	-262187	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	43411	+	NM_001143948 NM_032744	284192	-	NM_002114	517636	+	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1	0.0	
chr7	81585865	81585942	reg1003294.p1	4.168	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-186529	-	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-1037229	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-1037469	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	486943	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	487177	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	1205966	-	FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)	0.0	
chr8	27319277	27319457	reg1030791.p1	4.168	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-136290	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-136315	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-136350	+	AK314787 U62431 NM_000742	17404	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	29291	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	152838	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	0.0	
chr8	82192553	82192672	reg1034952.p1	4.168	+	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	-168298	-	AK131274 NM_001033723	-405597	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-794128	+	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	161	+	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	167057	-	AB528797 NM_001080526	181145	-	AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2##NM_001080526|FABP9|646480|fatty acid binding protein 9, testis	0.0	
chr10	13655668	13655804	reg1034428.p2	4.167	+	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-26749	+	NM_003675 TSC_hg19_v1_chr10_+_13628948	-26793	+	BC031618 AK097602 NM_001100912 NM_152751	-110777	-	TSC_hg19_v1_chr10_-_13749648 AK057828	93953	-	TSC_hg19_v1_chr10_-_14050453 AK001072	394756	-	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	717114	-	AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC031618|BEND7|222389|BEN domain containing 7##AK097602|BEND7|222389|BEN domain containing 7##NM_001100912|BEND7|222389|BEN domain containing 7##NM_152751|BEND7|222389|BEN domain containing 7##AK057828|FRMD4A|55691|FERM domain containing 4A##AK001072|FRMD4A|55691|FERM domain containing 4A##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A	0.266333	CTCF.p2:-33:0.266
chr12	103351636	103351754	reg1027906.p1	4.167	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-174	+	L47726 NM_000277 U49897	-40315	-	TSC_hg19_v1_chr12_-_103311062 BC026251	-40632	-	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	397	+	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	538051	-	AY311388 AJ295695 NM_017564 AB052958	629366	+	AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2	0.0	
chr12	12870150	12870331	reg1031403.p2	4.167	+	TSC_hg19_v1_chr12_+_12870308 AK312461 NM_004064 BC001971 AK298335	-114	+	AK096388 NM_006143	-21120	-	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	-105357	+	TSC_hg19_v1_chr12_+_12878853 NM_001130415 AK127712 BC042478 AM393383	8616	+	BC126433 BC126435 NM_030817 TSC_hg19_v1_chr12_+_12938594 AK057867 AK225176 AK314392 AL136783	68337	+	AK310501 TSC_hg19_v1_chr12_+_12966285 AK302536 AL136666 NM_016355 NM_201224 AL833469 AK054574 BC068009 AB462951 AJ276704 AM393320 AM393714 AK225144 AF190165 BC009379 AK222940 AF078843 EF036507	96050	+	AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK096388|GPR19|2842|G protein-coupled receptor 19##NM_006143|GPR19|2842|G protein-coupled receptor 19##BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001130415|APOLD1|81575|apolipoprotein L domain containing 1##BC042478|APOLD1|81575|apolipoprotein L domain containing 1##AM393383|APOLD1|81575|apolipoprotein L domain containing 1##BC126433|APOLD1|81575|apolipoprotein L domain containing 1##BC126435|APOLD1|81575|apolipoprotein L domain containing 1##NM_030817|APOLD1|81575|apolipoprotein L domain containing 1##AK225176|APOLD1|81575|apolipoprotein L domain containing 1##AK314392|APOLD1|81575|apolipoprotein L domain containing 1##AL136783|APOLD1|81575|apolipoprotein L domain containing 1##AK310501|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK302536|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AL136666|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_016355|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##NM_201224|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AL833469|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK054574|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC068009|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AJ276704|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AM393320|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AM393714|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK225144|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AF190165|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##BC009379|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AK222940|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##AF078843|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47##EF036507|DDX47|51202|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	0.0	
chr12	93381491	93381671	reg1007638.p2	4.167	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-58483	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-58538	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	-58643	-	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	390311	+	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	454105	-	TSC_hg19_v1_chr12_-_93835718 D83004	454137	-	NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.0	
chr13	111366479	111366585	reg1029889.p1	4.167	+	AB024401 AF149721 TSC_hg19_v1_chr13_+_111366061	-477	+	NM_198218 AF181850 NM_198219	-916	+	AK302353 AF149723 NM_198217	-1507	+	AB024402 AF181849 NM_005537	811	+	CU674848 CU691752 TSC_hg19_v1_chr13_-_111567293	200755	-	TSC_hg19_v1_chr13_-_111567375 BC001727 AK096083 BC039715	200833	-	AB024401|ING1|3621|inhibitor of growth family, member 1##AF149721|ING1|3621|inhibitor of growth family, member 1##NM_198218|ING1|3621|inhibitor of growth family, member 1##AF181850|ING1|3621|inhibitor of growth family, member 1##NM_198219|ING1|3621|inhibitor of growth family, member 1##AK302353|ING1|3621|inhibitor of growth family, member 1##AF149723|ING1|3621|inhibitor of growth family, member 1##NM_198217|ING1|3621|inhibitor of growth family, member 1##AB024402|ING1|3621|inhibitor of growth family, member 1##AF181849|ING1|3621|inhibitor of growth family, member 1##NM_005537|ING1|3621|inhibitor of growth family, member 1##BC001727|ANKRD10|55608|ankyrin repeat domain 10##AK096083|ANKRD10|55608|ankyrin repeat domain 10##BC039715|ANKRD10|55608|ankyrin repeat domain 10	0.620429	CTCF.p2:0:0.620
chr13	38343351	38343464	reg1031616.p2	4.167	+	EU262883 EU262884 EU262885 EU262886 AY140646 AY918092 BC106709 BC106710 D13666 GU354210 D13665 TSC_hg19_v1_chr13_-_38172906 NM_001135934 NM_001135935 NM_001135936 NM_006475	-170486	-	BC028723 NM_145203	-663607	-	AK292376 TSC_hg19_v1_chr13_-_37633791 AF445026 AF093250 AK225376 AJ130894 BC001145 AK304227 BC030686 NM_001014286 NM_017569	-709694	-	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	100491	-	NM_016617 TSC_hg19_v1_chr13_+_38923946	580544	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	580642	+	EU262883|POSTN|10631|periostin, osteoblast specific factor##EU262884|POSTN|10631|periostin, osteoblast specific factor##EU262885|POSTN|10631|periostin, osteoblast specific factor##EU262886|POSTN|10631|periostin, osteoblast specific factor##AY140646|POSTN|10631|periostin, osteoblast specific factor##AY918092|POSTN|10631|periostin, osteoblast specific factor##BC106709|POSTN|10631|periostin, osteoblast specific factor##BC106710|POSTN|10631|periostin, osteoblast specific factor##D13666|POSTN|10631|periostin, osteoblast specific factor##GU354210|POSTN|10631|periostin, osteoblast specific factor##D13665|POSTN|10631|periostin, osteoblast specific factor##NM_001135934|POSTN|10631|periostin, osteoblast specific factor##NM_001135935|POSTN|10631|periostin, osteoblast specific factor##NM_001135936|POSTN|10631|periostin, osteoblast specific factor##NM_006475|POSTN|10631|periostin, osteoblast specific factor##BC028723|CSNK1A1L|122011|casein kinase 1, alpha 1-like##NM_145203|CSNK1A1L|122011|casein kinase 1, alpha 1-like##AK292376|FAM48A|55578|family with sequence similarity 48, member A##AF445026|FAM48A|55578|family with sequence similarity 48, member A##AF093250|FAM48A|55578|family with sequence similarity 48, member A##AK225376|FAM48A|55578|family with sequence similarity 48, member A##AJ130894|FAM48A|55578|family with sequence similarity 48, member A##BC001145|FAM48A|55578|family with sequence similarity 48, member A##AK304227|FAM48A|55578|family with sequence similarity 48, member A##BC030686|FAM48A|55578|family with sequence similarity 48, member A##NM_001014286|FAM48A|55578|family with sequence similarity 48, member A##NM_017569|FAM48A|55578|family with sequence similarity 48, member A##BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1	0.981509	CTCF.p2:-11:0.982
chr16	14502340	14502521	reg1043122.p1	4.167	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-208232	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-221912	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-337344	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	221598	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	221703	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	224309	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.0	
chr16	46657340	46657430	reg1029922.p1	4.167	+	TSC_hg19_v1_chr16_-_46655304 NM_024745	-2079	-	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	-2113	-	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-13395252	+	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	65677	-	TSC_hg19_v1_chr16_-_46723112 NM_018206	65742	-	BC050725 NM_014321 AK024019 TSC_hg19_v1_chr16_+_46723570 AK024077	66180	+	NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##NM_018206|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC050725|ORC6|23594|origin recognition complex, subunit 6##NM_014321|ORC6|23594|origin recognition complex, subunit 6##AK024019|ORC6|23594|origin recognition complex, subunit 6##AK024077|ORC6|23594|origin recognition complex, subunit 6	0.297918	CTCF.p2:5:0.298
chr17	70459868	70460049	reg1031926.p2	4.167	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-342718	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-342788	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-342799	+	AK000477 TSC_hg19_v1_chr17_-_70588944	128985	-	AF331643 TSC_hg19_v1_chr17_-_71088816	628858	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	628865	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr18	46303841	46303962	reg1003596.p2	4.167	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-238128	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-368192	-	AM988836 AK296709 NM_001039360 EF120357	-640202	-	AK131394 NM_001190823	165246	-	AK301535 NM_001190822	171801	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	172866	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.0	
chr18	50221274	50221383	reg1031090.p1	4.167	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-354215	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-354787	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-1497288	-	TSC_hg19_v1_chr18_-_51690988 AL110266	1469664	-	AF072246 TSC_hg19_v1_chr18_-_51750614	1529209	-	TSC_hg19_v1_chr18_-_51750997 BC032638	1529637	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	0.619935	CTCF.p2:14:0.620
chr4	79535341	79535437	reg1034289.p2	4.167	+	TSC_hg19_v1_chr4_+_79472911 BC000871 AK313945	-62481	+	NM_005139 TSC_hg19_v1_chr4_+_79472790	-62619	+	BC006366 TSC_hg19_v1_chr4_-_79103287	-432104	-	TSC_hg19_v1_chr4_+_79697501 AL137661	162094	+	NM_017593 NM_198892 TSC_hg19_v1_chr4_+_79697532	162147	+	TSC_hg19_v1_chr4_+_79697552 AK292147 BC036021 DQ890994	162234	+	BC000871|ANXA3|306|annexin A3##AK313945|ANXA3|306|annexin A3##NM_005139|ANXA3|306|annexin A3##AL137661|BMP2K|55589|BMP2 inducible kinase##NM_017593|BMP2K|55589|BMP2 inducible kinase##NM_198892|BMP2K|55589|BMP2 inducible kinase##AK292147|BMP2K|55589|BMP2 inducible kinase##BC036021|BMP2K|55589|BMP2 inducible kinase##DQ890994|BMP2K|55589|BMP2 inducible kinase	0.0	
chrX	43327217	43327348	reg1037132.p1	4.167	+	AB208859 AB590064 HQ258518 AY705392 AF035582 BC117311 BC143454 BC143456 AF032119 NM_001126054 NM_001126055 NM_003688 AK313399	-1544957	-	BC070180 NM_080817 AK122626 AK313702 AL832460	-1743862	+	AK027780 NM_001097579 NM_005300 DQ106398 DQ106400 BC020678 DQ106399 DQ106401 DQ106402 AK075217	-1779015	+	BC044787 TSC_hg19_v1_chrX_+_43514289	186941	+	TSC_hg19_v1_chrX_+_43515423 NM_000240 AK223499	188132	+	TSC_hg19_v1_chrX_+_43515457 M68840	188198	+	AB208859|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##HQ258518|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AY705392|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF035582|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC117311|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143454|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC143456|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AF032119|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126054|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_001126055|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##NM_003688|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##AK313399|CASK|8573|calcium/calmodulin-dependent serine protein kinase (MAGUK family)##BC070180|GPR82|27197|G protein-coupled receptor 82##NM_080817|GPR82|27197|G protein-coupled receptor 82##AK122626|GPR82|27197|G protein-coupled receptor 82##AK313702|GPR82|27197|G protein-coupled receptor 82##AL832460|GPR82|27197|G protein-coupled receptor 82##AK027780|GPR34|2857|G protein-coupled receptor 34##NM_001097579|GPR34|2857|G protein-coupled receptor 34##NM_005300|GPR34|2857|G protein-coupled receptor 34##DQ106398|GPR34|2857|G protein-coupled receptor 34##DQ106400|GPR34|2857|G protein-coupled receptor 34##BC020678|GPR34|2857|G protein-coupled receptor 34##DQ106399|GPR34|2857|G protein-coupled receptor 34##DQ106401|GPR34|2857|G protein-coupled receptor 34##DQ106402|GPR34|2857|G protein-coupled receptor 34##AK075217|GPR34|2857|G protein-coupled receptor 34##BC044787|MAOA|4128|monoamine oxidase A##NM_000240|MAOA|4128|monoamine oxidase A##AK223499|MAOA|4128|monoamine oxidase A##M68840|MAOA|4128|monoamine oxidase A	0.980516	CTCF.p2:23:0.981
chr1	226187326	226187452	reg1034453.p1	4.166	+	TSC_hg19_v1_chr1_-_226187067 NM_152608	-308	-	TSC_hg19_v1_chr1_-_226187045 AK291008 AK127780 BC071563 AK308441	-353	-	TSC_hg19_v1_chr1_-_226187023 AK092701 AX747679 BX648319	-367	-	AK311905 NM_002107 TSC_hg19_v1_chr1_+_226250410	63020	+	TSC_hg19_v1_chr1_+_226250416 D28384	63027	+	TSC_hg19_v1_chr1_+_226250421 AK291102 AK293541 BC029405 BC067757 BC095447 M11354 BC066901	63037	+	NM_152608|C1orf55|163859|chromosome 1 open reading frame 55##AK291008|C1orf55|163859|chromosome 1 open reading frame 55##AK127780|C1orf55|163859|chromosome 1 open reading frame 55##BC071563|C1orf55|163859|chromosome 1 open reading frame 55##AK308441|C1orf55|163859|chromosome 1 open reading frame 55##AK092701|C1orf55|163859|chromosome 1 open reading frame 55##BX648319|C1orf55|163859|chromosome 1 open reading frame 55##AK311905|H3F3A|3020|H3 histone, family 3A##NM_002107|H3F3A|3020|H3 histone, family 3A##D28384|H3F3A|3020|H3 histone, family 3A##AK291102|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##AK293541|H3F3A|3020|H3 histone, family 3A##BC029405|H3F3A|3020|H3 histone, family 3A##BC067757|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC095447|H3F3A|3020|H3 histone, family 3A##M11354|H3F3A|3020|H3 histone, family 3A##BC066901|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4	0.0	
chr1	23888535	23888613	reg1031278.p1	4.166	+	NM_002167 X69111	-2290	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	-2590	-	L22846 NM_004091	-30863	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	129706	+	TSC_hg19_v1_chr1_+_24018295 BC018970	129725	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	181330	+	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11##BC018970|RPL11|6135|ribosomal protein L11##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)	0.0	
chr16	62672838	62672980	reg1031448.p1	4.166	+	AK124734 NM_001796	-602171	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-3904712	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-3954253	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	2482993	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	2483059	-	TSC_hg19_v1_chr16_-_65155987 AK297377	2483085	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.083005	
chr17	69457243	69457342	reg1033987.p1	4.166	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-1291596	+	BC033038 NM_170742	-1356298	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-1385862	+	TSC_hg19_v1_chr17_-_70116937 AL833139	659646	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	659867	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	659878	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.26493	CTCF.p2:-10:0.265
chr1	92351515	92351639	reg1030380.p1	4.166	+	AK291345 BC126116 BC136295 BC143869 TSC_hg19_v1_chr1_-_92351559	-60	-	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	-384896	+	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	-385158	+	AK225799 TSC_hg19_v1_chr1_-_92351709 NM_001195683 NM_003243	170	-	L07594 NM_001195684	19981	-	AY338951 NM_001242805 NM_001242806 NM_001242807 NM_001242808 NM_001242810 NM_207189 AK316442	63350	+	AK291345|TGFBR3|7049|transforming growth factor, beta receptor III##BC126116|TGFBR3|7049|transforming growth factor, beta receptor III##BC136295|TGFBR3|7049|transforming growth factor, beta receptor III##BC143869|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK225799|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195683|TGFBR3|7049|transforming growth factor, beta receptor III##NM_003243|TGFBR3|7049|transforming growth factor, beta receptor III##L07594|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195684|TGFBR3|7049|transforming growth factor, beta receptor III##AY338951|BRDT|676|bromodomain, testis-specific##NM_001242805|BRDT|676|bromodomain, testis-specific##NM_001242806|BRDT|676|bromodomain, testis-specific##NM_001242807|BRDT|676|bromodomain, testis-specific##NM_001242808|BRDT|676|bromodomain, testis-specific##NM_001242810|BRDT|676|bromodomain, testis-specific##NM_207189|BRDT|676|bromodomain, testis-specific##AK316442|BRDT|676|bromodomain, testis-specific	0.0	
chr3	20267386	20267510	reg1036449.p1	4.166	+	AB193056 AB193057 AB193058 AB193059 AB193060 AB193061 AB193062 AB193063 AB193064 AB193065 AB193066 TSC_hg19_v1_chr3_-_20227699 AB187577 AB187578 AB187579 AB187580 AB187581 AB187582 AB567656 AB567657 BC017867 BX648516 NM_001012409 NM_001012410 NM_001012411 NM_001012412 NM_001012413 NM_138484 AK308095 NM_001199251 NM_001199252 NM_001199253 NM_001199254 NM_001199255 NM_001199256 NM_001199257	-39774	-	BC070075 TSC_hg19_v1_chr3_+_20081907 BC060823 AB527402	-185538	+	NM_003884 U57317	-185925	+	AK026072 NM_024697	1525367	-	AK310298 TSC_hg19_v1_chr3_-_22414124	2146686	-	TSC_hg19_v1_chr3_+_23244600 AK307075	2977135	+	AB193056|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193057|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193058|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193059|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193060|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193061|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193062|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193063|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193064|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193065|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB193066|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187577|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187578|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187579|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187580|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187581|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB187582|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567656|SGOL1|151648|shugoshin-like 1 (S. pombe)##AB567657|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC017867|SGOL1|151648|shugoshin-like 1 (S. pombe)##BX648516|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012409|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012410|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012411|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012412|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001012413|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_138484|SGOL1|151648|shugoshin-like 1 (S. pombe)##AK308095|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199251|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199252|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199253|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199254|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199255|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199256|SGOL1|151648|shugoshin-like 1 (S. pombe)##NM_001199257|SGOL1|151648|shugoshin-like 1 (S. pombe)##BC070075|KAT2B|8850|K(lysine) acetyltransferase 2B##BC060823|KAT2B|8850|K(lysine) acetyltransferase 2B##NM_003884|KAT2B|8850|K(lysine) acetyltransferase 2B##U57317|KAT2B|8850|K(lysine) acetyltransferase 2B##AK026072|ZNF385D|79750|zinc finger protein 385D##NM_024697|ZNF385D|79750|zinc finger protein 385D##AK310298|ZNF385D|79750|zinc finger protein 385D##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2	0.122831	
chr8	98572552	98572675	reg1007652.p2	4.166	+	TSC_hg19_v1_chr8_-_98290193 AK091445 AX746987	-282394	-	TSC_hg19_v1_chr8_-_98290171 BC045630 NM_033512	-282440	-	CU692280 AB384285 AB051537 TSC_hg19_v1_chr8_-_98290135	-282505	-	TSC_hg19_v1_chr8_+_98656416 BC045642 NM_178812 BC001815	83764	+	TSC_hg19_v1_chr8_+_98656437 BC014977 AF501310	83846	+	BC022825 TSC_hg19_v1_chr8_+_98656510 BC009324 AF411226 AY082966 AY974040	84000	+	AK091445|TSPYL5|85453|TSPY-like 5##BC045630|TSPYL5|85453|TSPY-like 5##NM_033512|TSPYL5|85453|TSPY-like 5##AB051537|TSPYL5|85453|TSPY-like 5##BC045642|MTDH|92140|metadherin##NM_178812|MTDH|92140|metadherin##BC001815|MTDH|92140|metadherin##BC014977|MTDH|92140|metadherin##AF501310|MTDH|92140|metadherin##BC022825|MTDH|92140|metadherin##BC009324|MTDH|92140|metadherin##AF411226|MTDH|92140|metadherin##AY082966|MTDH|92140|metadherin##AY974040|MTDH|92140|metadherin	0.0	
chr10	52176276	52176424	reg1037404.p1	4.165	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-168010	-	NM_018232	-338465	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-348628	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	207353	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	323360	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	469043	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.022477	
chr10	5882838	5883019	reg1024411.p2	4.165	+	TSC_hg19_v1_chr10_-_5855394 Y13286 AK297177 AK297554 AK312485 NM_001115156 NM_001494	-27493	-	BX648038 AB451295 AB451429 BT006868 CR457073 D13988 DQ890573 DQ893733 BC005145 TSC_hg19_v1_chr10_-_5855330 AK309360	-27662	-	TSC_hg19_v1_chr10_+_5772610 AB095927	-110256	+	TSC_hg19_v1_chr10_-_5931834 BC067892 NM_001009941 NM_001009943 NM_019046	48928	-	TSC_hg19_v1_chr10_+_5932205 AK095343	49271	+	TSC_hg19_v1_chr10_+_5932214 NM_178150	49283	+	Y13286|GDI2|2665|GDP dissociation inhibitor 2##AK297177|GDI2|2665|GDP dissociation inhibitor 2##AK297554|GDI2|2665|GDP dissociation inhibitor 2##AK312485|GDI2|2665|GDP dissociation inhibitor 2##NM_001115156|GDI2|2665|GDP dissociation inhibitor 2##NM_001494|GDI2|2665|GDP dissociation inhibitor 2##BX648038|GDI2|2665|GDP dissociation inhibitor 2##AB451295|GDI2|2665|GDP dissociation inhibitor 2##AB451429|GDI2|2665|GDP dissociation inhibitor 2##BT006868|GDI2|2665|GDP dissociation inhibitor 2##CR457073|GDI2|2665|GDP dissociation inhibitor 2##D13988|GDI2|2665|GDP dissociation inhibitor 2##DQ890573|GDI2|2665|GDP dissociation inhibitor 2##DQ893733|GDI2|2665|GDP dissociation inhibitor 2##BC005145|GDI2|2665|GDP dissociation inhibitor 2##AK309360|GDI2|2665|GDP dissociation inhibitor 2##AB095927|FAM208B|54906|family with sequence similarity 208, member B##BC067892|ANKRD16|54522|ankyrin repeat domain 16##NM_001009941|ANKRD16|54522|ankyrin repeat domain 16##NM_001009943|ANKRD16|54522|ankyrin repeat domain 16##NM_019046|ANKRD16|54522|ankyrin repeat domain 16##AK095343|FBXO18|84893|F-box protein, helicase, 18##NM_178150|FBXO18|84893|F-box protein, helicase, 18	0.0	
chr11	58967806	58967981	reg1036921.p2	4.165	+	TSC_hg19_v1_chr11_+_58940008 AB023154 AB385405	-27864	+	TSC_hg19_v1_chr11_+_58939648 NM_015177	-28208	+	NM_022074 NM_198847 AK291453 BC071759 AK092061 AX747338	-55614	+	TSC_hg19_v1_chr11_-_58980401 BC104997 BC112230 AK097881 AK074166 AK301210 NM_001039396	12514	-	BC140917 NM_001004729	164014	+	NM_001001954 BC136991	222543	-	AB023154|DTX4|23220|deltex homolog 4 (Drosophila)##NM_015177|DTX4|23220|deltex homolog 4 (Drosophila)##NM_022074|FAM111A|63901|family with sequence similarity 111, member A##NM_198847|FAM111A|63901|family with sequence similarity 111, member A##AK291453|FAM111A|63901|family with sequence similarity 111, member A##BC071759|FAM111A|63901|family with sequence similarity 111, member A##AK092061|FAM111A|63901|family with sequence similarity 111, member A##BC104997|MPEG1|219972|macrophage expressed 1##BC112230|MPEG1|219972|macrophage expressed 1##AK097881|MPEG1|219972|macrophage expressed 1##AK074166|MPEG1|219972|macrophage expressed 1##NM_001039396|MPEG1|219972|macrophage expressed 1##BC140917|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001004729|OR5AN1|390195|olfactory receptor, family 5, subfamily AN, member 1##NM_001001954|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2##BC136991|OR5A2|219981|olfactory receptor, family 5, subfamily A, member 2	0.0	
chr12	1642563	1642743	reg1032991.p1	4.165	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-542201	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-583827	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-625571	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	60698	-	AY009399 NM_030775	83568	+	BC001749 NM_032642	95758	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.0	
chr14	77499266	77499446	reg1035760.p1	4.165	+	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-4296	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	-4672	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-206561	+	AK124327 TSC_hg19_v1_chr14_-_77542533	43177	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	65289	+	BC117676 TSC_hg19_v1_chr14_-_77608072	108659	-	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22	0.0	
chr18	13726489	13726585	reg1026597.p1	4.165	+	TSC_hg19_v1_chr18_-_13726549 AK055618	-31	-	AF009426 AF009427 NM_004338 NM_181483	-105671	+	NM_001003674 NM_001003675	-114873	+	TSC_hg19_v1_chr18_-_13726582 AK309506 NM_001098801 NM_152352	49	-	TSC_hg19_v1_chr18_+_13726671 AK296370 BC017816 BX647977 AK303842 BC005290 AK292561 AB007858 AF067791 NM_003799 AB020966 BC036798	153	+	BC095531 NM_005913	99005	+	AK055618|FAM210A|125228|family with sequence similarity 210, member A##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AK309506|FAM210A|125228|family with sequence similarity 210, member A##NM_001098801|FAM210A|125228|family with sequence similarity 210, member A##NM_152352|FAM210A|125228|family with sequence similarity 210, member A##AK296370|RNMT|8731|RNA (guanine-7-) methyltransferase##BC017816|RNMT|8731|RNA (guanine-7-) methyltransferase##BX647977|RNMT|8731|RNA (guanine-7-) methyltransferase##AK303842|RNMT|8731|RNA (guanine-7-) methyltransferase##BC005290|RNMT|8731|RNA (guanine-7-) methyltransferase##AK292561|RNMT|8731|RNA (guanine-7-) methyltransferase##AB007858|RNMT|8731|RNA (guanine-7-) methyltransferase##AF067791|RNMT|8731|RNA (guanine-7-) methyltransferase##NM_003799|RNMT|8731|RNA (guanine-7-) methyltransferase##AB020966|RNMT|8731|RNA (guanine-7-) methyltransferase##BC036798|RNMT|8731|RNA (guanine-7-) methyltransferase##BC095531|MC5R|4161|melanocortin 5 receptor##NM_005913|MC5R|4161|melanocortin 5 receptor	0.0	
chr19	48823590	48823755	reg1002157.p2	4.165	+	BC007730 NM_144577	-341	-	AK075062 NM_153608	-49019	+	TSC_hg19_v1_chr19_-_48759141 BC056891 BC034564 BC046136 NM_001184902 NM_001184904	-64501	-	TSC_hg19_v1_chr19_-_48825152 AK128144	1498	-	TSC_hg19_v1_chr19_+_48828629 NM_001425 U87947	4968	+	TSC_hg19_v1_chr19_+_48828847 BC009718 U52101	5162	+	BC007730|CCDC114|93233|coiled-coil domain containing 114##NM_144577|CCDC114|93233|coiled-coil domain containing 114##AK075062|ZNF114|163071|zinc finger protein 114##NM_153608|ZNF114|163071|zinc finger protein 114##BC056891|CARD8|22900|caspase recruitment domain family, member 8##BC034564|CARD8|22900|caspase recruitment domain family, member 8##BC046136|CARD8|22900|caspase recruitment domain family, member 8##NM_001184902|CARD8|22900|caspase recruitment domain family, member 8##NM_001184904|CARD8|22900|caspase recruitment domain family, member 8##AK128144|CCDC114|93233|coiled-coil domain containing 114##NM_001425|EMP3|2014|epithelial membrane protein 3##U87947|EMP3|2014|epithelial membrane protein 3##BC009718|EMP3|2014|epithelial membrane protein 3##U52101|EMP3|2014|epithelial membrane protein 3	0.0	
chr2	237261996	237262177	reg1005011.p2	4.165	+	NM_212556 BX647589	-89092	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-185454	-	AK311262 TSC_hg19_v1_chr2_-_237076045	-186072	-	BC043504 NM_024726 AK294105 BC028699	154046	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	216342	+	BC036499 NM_006710 NM_198189	731932	+	NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	0.0	
chr3	6433984	6434092	reg1030541.p2	4.165	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-1204547	+	TSC_hg19_v1_chr3_+_5229430 D86967	-1204605	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	-1204675	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	468761	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	468860	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	2109292	-	DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK124088|LOC100288428|100288428|uncharacterized LOC100288428	0.886878	CTCF.p2:-27:0.887
chr7	2861095	2861275	reg1030708.p2	4.165	+	AK289723 AB075830 BC146753 NM_133463	-142027	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-189482	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	-189582	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	22623	-	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	222277	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	479814	+	AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1	0.0	
chr7	93633834	93634014	reg1022464.p2	4.165	+	BT009853 DQ894078 BC000899 TSC_hg19_v1_chr7_-_93633668 CR749267 AF007551 AK313984 BC012595 NM_005868	-310	-	NM_004126 BC009709	-82868	+	BC029367 NM_021955	-98105	+	J03464 NM_000089 X02488	389948	+	TSC_hg19_v1_chr7_+_94024206 AK297786 AK223175 AK300194 Z74616 AK226074 BC042586 BC054498 Y00724 CU691094 AB384984	390347	+	TSC_hg19_v1_chr7_+_94139172 BC029543 NM_022900 BC063284 AF397424	505198	+	BT009853|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##DQ894078|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC000899|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##CR749267|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AF007551|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##AK313984|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##BC012595|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_005868|BET1|10282|blocked early in transport 1 homolog (S. cerevisiae)##NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##J03464|COL1A2|1278|collagen, type I, alpha 2##NM_000089|COL1A2|1278|collagen, type I, alpha 2##X02488|COL1A2|1278|collagen, type I, alpha 2##AK297786|COL1A2|1278|collagen, type I, alpha 2##AK223175|COL1A2|1278|collagen, type I, alpha 2##AK300194|COL1A2|1278|collagen, type I, alpha 2##Z74616|COL1A2|1278|collagen, type I, alpha 2##AK226074|COL1A2|1278|collagen, type I, alpha 2##BC042586|COL1A2|1278|collagen, type I, alpha 2##BC054498|COL1A2|1278|collagen, type I, alpha 2##Y00724|COL1A2|1278|collagen, type I, alpha 2##BC029543|CASD1|64921|CAS1 domain containing 1##NM_022900|CASD1|64921|CAS1 domain containing 1##BC063284|CASD1|64921|CAS1 domain containing 1##AF397424|CASD1|64921|CAS1 domain containing 1	0.0	
chr10	122528	122666	reg1037236.p1	4.164	+	BC101270 BC101271 NM_177987	-27424	-	None	None	None	None	None	None	NM_006624 NM_001202465 NM_001202466 NM_212479 TSC_hg19_v1_chr10_+_180423	57816	+	TSC_hg19_v1_chr10_+_181412 BC091489 NM_001202464	58823	+	BC012586 X86098 NM_001202467 NM_001202468 AB385196 DQ335452 DQ335453 DQ335454 DQ335455 AK296427	103349	+	BC101270|TUBB8|347688|tubulin, beta 8 class VIII##BC101271|TUBB8|347688|tubulin, beta 8 class VIII##NM_177987|TUBB8|347688|tubulin, beta 8 class VIII##NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202465|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202466|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11##BC091489|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202464|ZMYND11|10771|zinc finger, MYND-type containing 11##BC012586|ZMYND11|10771|zinc finger, MYND-type containing 11##X86098|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202467|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202468|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335452|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335453|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335454|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335455|ZMYND11|10771|zinc finger, MYND-type containing 11##AK296427|ZMYND11|10771|zinc finger, MYND-type containing 11	0.923286	CTCF.p2:18:0.923
chr17	19140704	19140784	reg1029125.p1	4.164	+	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	-36	+	BC157869 NM_001129778	-109963	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-190458	-	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	125225	-	TSC_hg19_v1_chr17_+_19281077 NM_139032 NM_139033 BC007404 BC007992 U29725 AK295376	140446	+	AK309320 NM_001243475	140750	-	NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1##NM_139032|MAPK7|5598|mitogen-activated protein kinase 7##NM_139033|MAPK7|5598|mitogen-activated protein kinase 7##BC007404|MAPK7|5598|mitogen-activated protein kinase 7##BC007992|MAPK7|5598|mitogen-activated protein kinase 7##U29725|MAPK7|5598|mitogen-activated protein kinase 7##AK295376|MAPK7|5598|mitogen-activated protein kinase 7##AK309320|B9D1|27077|B9 protein domain 1##NM_001243475|B9D1|27077|B9 protein domain 1	0.681313	CTCF.p2:-45:0.681
chr2	196803110	196803235	reg1032617.p1	4.164	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	-281264	+	BC029413 NM_001127257 CR749813	-281597	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-3743543	-	AB463018 AF327442 AK094515 NM_018897 AB023161	130323	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	233107	-	TSC_hg19_v1_chr2_-_197036310 NM_004226	233146	-	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##NM_004226|STK17B|9262|serine/threonine kinase 17b	0.997342	CTCF.p2:13:0.997
chr4	152682324	152682470	reg1030811.p1	4.164	+	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	-256	-	TSC_hg19_v1_chr4_+_152330327 NM_001109977	-352036	+	BC121109 BC121110 NM_183375	-484073	+	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	591499	-	NM_001013415 AY008274	621267	-	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	773897	-	AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##NM_001109977|FAM160A1|729830|family with sequence similarity 160, member A1##BC121109|PRSS48|345062|protease, serine, 48##BC121110|PRSS48|345062|protease, serine, 48##NM_183375|PRSS48|345062|protease, serine, 48##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7	0.0	
chr6	106960300	106960408	reg1027790.p2	4.164	+	AK056705 NM_001624	-625	+	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	-186691	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	-186822	-	TSC_hg19_v1_chr6_+_106960443 U83115	57	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	116926	-	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	117143	+	AK056705|AIM1|202|absent in melanoma 1##NM_001624|AIM1|202|absent in melanoma 1##CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##U83115|AIM1|202|absent in melanoma 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	0.237162	CTCF.p2:-9:0.237
chr9	127058820	127058901	reg1033731.p1	4.164	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	-4228	+	TSC_hg19_v1_chr9_+_127054267 NM_001166170 NM_001166171	-4601	+	TSC_hg19_v1_chr9_+_127020588 AL832574	-38270	+	TSC_hg19_v1_chr9_+_127119114 BC042968	60309	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	118860	-	AY278562 NM_001161808	154562	+	AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166170|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166171|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144	0.0	
chr1	109791981	109792076	reg1037027.p2	4.163	+	TSC_hg19_v1_chr1_+_109756589 BC000716 D49914 AB528307 CU679341 DQ892144 DQ895339	-35429	+	TSC_hg19_v1_chr1_+_109756577 BC009390	-35457	+	TSC_hg19_v1_chr1_+_109756553 AK222677 AK312771	-35478	+	AF234887 NM_001408	612	+	TSC_hg19_v1_chr1_-_109825736 AK126567 AK289593 BX649139	33684	-	TSC_hg19_v1_chr1_-_109825755 BC017190	33726	-	BC000716|SARS|6301|seryl-tRNA synthetase##D49914|SARS|6301|seryl-tRNA synthetase##DQ892144|SARS|6301|seryl-tRNA synthetase##DQ895339|SARS|6301|seryl-tRNA synthetase##BC009390|SARS|6301|seryl-tRNA synthetase##AK222677|SARS|6301|seryl-tRNA synthetase##AK312771|SARS|6301|seryl-tRNA synthetase##AF234887|CELSR2|1952|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)##NM_001408|CELSR2|1952|cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)##AK126567|PSRC1|84722|proline/serine-rich coiled-coil 1##AK289593|PSRC1|84722|proline/serine-rich coiled-coil 1##BX649139|PSRC1|84722|proline/serine-rich coiled-coil 1	0.0	
chr11	111247447	111247581	reg1030535.p2	4.163	+	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	-77481	+	BC039669 NM_198498	-120808	+	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	-664229	-	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	2438	-	NM_006235	2642	-	BC031045 NM_017589	135556	-	AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##BC039669|C11orf53|341032|chromosome 11 open reading frame 53##NM_198498|C11orf53|341032|chromosome 11 open reading frame 53##AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##NM_006235|POU2AF1|5450|POU class 2 associating factor 1##BC031045|BTG4|54766|B-cell translocation gene 4##NM_017589|BTG4|54766|B-cell translocation gene 4	0.0	
chr11	119252340	119252449	reg1027432.p2	4.163	+	TSC_hg19_v1_chr11_-_119252321 BC002854 BC002955	-83	-	TSC_hg19_v1_chr11_-_119234904 AK309582 AF440755 NM_171997	-17512	-	AF079564 AK301805 AK292255 TSC_hg19_v1_chr11_-_119234855	-17652	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	5	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	41515	-	BC037832 NM_006288	41849	-	BC002854|USP2|9099|ubiquitin specific peptidase 2##BC002955|USP2|9099|ubiquitin specific peptidase 2##AF440755|USP2|9099|ubiquitin specific peptidase 2##NM_171997|USP2|9099|ubiquitin specific peptidase 2##AF079564|USP2|9099|ubiquitin specific peptidase 2##AK301805|USP2|9099|ubiquitin specific peptidase 2##AK292255|USP2|9099|ubiquitin specific peptidase 2##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen	0.469717	CTCF.p2:-19:0.470
chr11	134122999	134123179	reg1033810.p1	4.163	+	TSC_hg19_v1_chr11_+_134094573 BC014128 BC009747	-28481	+	TSC_hg19_v1_chr11_+_134094548 AF452718 NM_052875	-28537	+	TSC_hg19_v1_chr11_+_134094486 BC098386	-28598	+	AK308498 AK308498 AF182413 TSC_hg19_v1_chr11_-_134123259 AF161493 AF059619 BC093074 AK311024 BC006978 NM_001037304 NM_001037305 NM_014174 NM_199297 NM_199298	110	-	AF126245 AK309838 NM_014384 TSC_hg19_v1_chr11_+_134123461 AK299492 AK301921 AK299795 AK074640 AK000359 AK315980 AK125373 BC001964 AK303569 AK309051 AK309051 CU674960 DQ891093 DQ894275	361	+	BC011001 NM_001080407	23185	+	BC014128|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##BC009747|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##AF452718|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##NM_052875|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##BC098386|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##AK308498|THYN1|29087|thymocyte nuclear protein 1##AK308498|THYN1|29087|thymocyte nuclear protein 1##AF182413|THYN1|29087|thymocyte nuclear protein 1##AF161493|THYN1|29087|thymocyte nuclear protein 1##AF059619|THYN1|29087|thymocyte nuclear protein 1##BC093074|THYN1|29087|thymocyte nuclear protein 1##AK311024|THYN1|29087|thymocyte nuclear protein 1##BC006978|THYN1|29087|thymocyte nuclear protein 1##NM_001037304|THYN1|29087|thymocyte nuclear protein 1##NM_001037305|THYN1|29087|thymocyte nuclear protein 1##NM_014174|THYN1|29087|thymocyte nuclear protein 1##NM_199297|THYN1|29087|thymocyte nuclear protein 1##NM_199298|THYN1|29087|thymocyte nuclear protein 1##AF126245|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK309838|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##NM_014384|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK299492|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK301921|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK299795|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK074640|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK000359|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK125373|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##BC001964|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK303569|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK309051|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK309051|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##DQ891093|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##DQ894275|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##BC011001|GLB1L3|112937|galactosidase, beta 1-like 3##NM_001080407|GLB1L3|112937|galactosidase, beta 1-like 3	0.0	
chr11	9281842	9281966	reg1034456.p2	4.163	+	TSC_hg19_v1_chr11_-_9225783 AK302478	-56083	-	BC111690 AK131552 AK123039 NM_001170690 NM_020974 TSC_hg19_v1_chr11_-_9113185	-168766	-	BC008835 TSC_hg19_v1_chr11_-_9025549 AK024750 AK098694 AK296484 NM_020645	-256341	-	AB029014 TSC_hg19_v1_chr11_-_9286891 BC071596 NM_001243254 NM_015213	4958	-	AK303339 TSC_hg19_v1_chr11_-_9336043 BC064366 BC091524	54155	-	TSC_hg19_v1_chr11_-_9336141 D26067	54234	-	AK302478|DENND5A|23258|DENN/MADD domain containing 5A##BC111690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK131552|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK123039|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_001170690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_020974|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##BC008835|NRIP3|56675|nuclear receptor interacting protein 3##AK024750|NRIP3|56675|nuclear receptor interacting protein 3##AK098694|NRIP3|56675|nuclear receptor interacting protein 3##AK296484|NRIP3|56675|nuclear receptor interacting protein 3##NM_020645|NRIP3|56675|nuclear receptor interacting protein 3##AB029014|DENND5A|23258|DENN/MADD domain containing 5A##BC071596|DENND5A|23258|DENN/MADD domain containing 5A##NM_001243254|DENND5A|23258|DENN/MADD domain containing 5A##NM_015213|DENND5A|23258|DENN/MADD domain containing 5A##AK303339|TMEM41B|440026|transmembrane protein 41B##BC064366|TMEM41B|440026|transmembrane protein 41B##BC091524|TMEM41B|440026|transmembrane protein 41B##D26067|TMEM41B|440026|transmembrane protein 41B	0.030366	
chr13	100007036	100007112	reg1037481.p2	4.163	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-47376	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-96460	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-153955	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	146626	+	TSC_hg19_v1_chr13_+_100153777 BC130293	146708	+	BC041830 TSC_hg19_v1_chr13_+_100229390	222303	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.0	
chr17	78711352	78711532	reg1023789.p2	4.163	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-192624	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-192793	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-261115	-	TSC_hg19_v1_chr17_+_78935064 BC073898	223690	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	254199	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	254252	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.0	
chr2	126274224	126274338	reg1033243.p1	4.163	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-1491417	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-3761044	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-3779816	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	1139426	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	1139511	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	1590460	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.9929	CTCF.p2:-2:0.993
chr2	98524817	98524997	reg1026435.p2	4.163	+	AK025852 TSC_hg19_v1_chr2_-_98408976	-115985	-	AB083211 NM_207519	-174039	+	L05148 NM_001079 AK303341 AK310637 AK310628 BC053878	-194865	+	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	87279	-	TSC_hg19_v1_chr2_-_98612395 AK098792	87496	-	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	178739	+	AK025852|TMEM131|23505|transmembrane protein 131##AB083211|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_207519|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##L05148|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_001079|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK303341|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310637|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310628|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##BC053878|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##AK098792|TMEM131|23505|transmembrane protein 131##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B	0.0	
chr6_dbb_hap3	4103244	4103352	reg1032550.p2	4.163	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.08447	
chr8	3192326	3192440	reg1033895.p2	4.163	+	AK128880 TSC_hg19_v1_chr8_-_2585966	-606401	-	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-1199181	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-1239475	+	AY017307 TSC_hg19_v1_chr8_-_4852228	1659842	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	1659911	-	TSC_hg19_v1_chr8_-_6264053 BC036625	3071674	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.651364	CTCF.p2:-8:0.651
chr10	125795487	125795667	reg1029391.p1	4.162	+	BC137492 BC146862 AY358565 NM_198148	-144081	-	AJ505757 NM_153442 BC112011 BC113462	-369700	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-881221	+	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	56322	-	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	57576	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	311896	-	BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase	0.0	
chr11	73036652	73036743	reg1024980.p2	4.162	+	TSC_hg19_v1_chr11_-_73020422 AK300095	-16274	-	BC137228 NM_014786 AF378754	-17032	+	TSC_hg19_v1_chr11_+_73019337 AK074500	-17293	+	TSC_hg19_v1_chr11_+_73087471 AK027899 NM_152222 BC051810 BC017279	50740	+	TSC_hg19_v1_chr11_+_73087683 AF319553 NM_032871	50994	+	D87470 TSC_hg19_v1_chr11_-_73309158 AK292054 EF197985 BC052341 EF363480 NM_015159	272501	-	AK300095|LOC100287837|100287837|uncharacterized LOC100287837##BC137228|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##NM_014786|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AF378754|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK074500|ARHGEF17|9828|Rho guanine nucleotide exchange factor (GEF) 17##AK027899|RELT|84957|RELT tumor necrosis factor receptor##NM_152222|RELT|84957|RELT tumor necrosis factor receptor##BC051810|RELT|84957|RELT tumor necrosis factor receptor##BC017279|RELT|84957|RELT tumor necrosis factor receptor##AF319553|RELT|84957|RELT tumor necrosis factor receptor##NM_032871|RELT|84957|RELT tumor necrosis factor receptor##D87470|FAM168A|23201|family with sequence similarity 168, member A##AK292054|FAM168A|23201|family with sequence similarity 168, member A##EF197985|FAM168A|23201|family with sequence similarity 168, member A##BC052341|FAM168A|23201|family with sequence similarity 168, member A##EF363480|FAM168A|23201|family with sequence similarity 168, member A##NM_015159|FAM168A|23201|family with sequence similarity 168, member A	0.0	
chr13	52158390	52158550	reg1019767.p2	4.162	+	TSC_hg19_v1_chr13_+_52034640 D28359	-123830	+	TSC_hg19_v1_chr13_+_52027481 BC030118 BC045725	-130997	+	NM_001039937 NM_001039938 NM_012141 AL833524 TSC_hg19_v1_chr13_-_52027409	-131128	-	NM_052950 TSC_hg19_v1_chr13_+_52158579	67	+	TSC_hg19_v1_chr13_+_52158597 AK311177	124	+	AK309815 TSC_hg19_v1_chr13_+_52158630	163	+	NM_001039937|INTS6|26512|integrator complex subunit 6##NM_001039938|INTS6|26512|integrator complex subunit 6##NM_012141|INTS6|26512|integrator complex subunit 6##AL833524|INTS6|26512|integrator complex subunit 6##NM_052950|WDFY2|115825|WD repeat and FYVE domain containing 2##AK311177|WDFY2|115825|WD repeat and FYVE domain containing 2##AK309815|WDFY2|115825|WD repeat and FYVE domain containing 2	0.0	
chr15	58810463	58810644	reg1031529.p1	4.162	+	NM_000236 X07228 AK293324 AK309448 TSC_hg19_v1_chr15_+_58724189 D83548 BC132825 BC136495 J03895 J03540 AB528021 HQ258274	-86351	+	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	-380067	+	NM_001206897 NM_003888 NM_170696	-452433	-	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	231236	-	TSC_hg19_v1_chr15_-_59041833 AK300472	231269	-	TSC_hg19_v1_chr15_-_59041988 BC126253 BC143935 NM_001110	231501	-	NM_000236|LIPC|3990|lipase, hepatic##X07228|LIPC|3990|lipase, hepatic##AK293324|LIPC|3990|lipase, hepatic##AK309448|LIPC|3990|lipase, hepatic##D83548|LIPC|3990|lipase, hepatic##BC132825|LIPC|3990|lipase, hepatic##BC136495|LIPC|3990|lipase, hepatic##J03895|LIPC|3990|lipase, hepatic##J03540|LIPC|3990|lipase, hepatic##HQ258274|LIPC|3990|lipase, hepatic##AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10##AK300472|ADAM10|102|ADAM metallopeptidase domain 10##BC126253|ADAM10|102|ADAM metallopeptidase domain 10##BC143935|ADAM10|102|ADAM metallopeptidase domain 10##NM_001110|ADAM10|102|ADAM metallopeptidase domain 10	0.0	
chr16	30470249	30470382	reg1026978.p2	4.162	+	TSC_hg19_v1_chr16_-_30457197 AK093889 AX748354 NM_012248	-13086	-	BC016643 BC002381 U43286 TSC_hg19_v1_chr16_-_30457196 AK092003 AK303275 AX747304	-13133	-	CR457335 TSC_hg19_v1_chr16_-_30441339 AK024843 AF212242 AF210430 AY453409 BC001344 NM_024096	-28976	-	TSC_hg19_v1_chr16_+_30484003 NM_001114380 NM_002209 AX794822 AX794826 AK314246	13685	+	BC008777 AX794824 TSC_hg19_v1_chr16_+_30484062 AK298674 AX794810 Y00796 AK303190	13757	+	TSC_hg19_v1_chr16_+_30484116 AX794821 CU679099	13818	+	AK093889|SEPHS2|22928|selenophosphate synthetase 2##NM_012248|SEPHS2|22928|selenophosphate synthetase 2##BC016643|SEPHS2|22928|selenophosphate synthetase 2##BC002381|SEPHS2|22928|selenophosphate synthetase 2##U43286|SEPHS2|22928|selenophosphate synthetase 2##AK092003|SEPHS2|22928|selenophosphate synthetase 2##AK303275|SEPHS2|22928|selenophosphate synthetase 2##CR457335|DCTPP1|79077|dCTP pyrophosphatase 1##AK024843|DCTPP1|79077|dCTP pyrophosphatase 1##AF212242|DCTPP1|79077|dCTP pyrophosphatase 1##AF210430|DCTPP1|79077|dCTP pyrophosphatase 1##AY453409|DCTPP1|79077|dCTP pyrophosphatase 1##BC001344|DCTPP1|79077|dCTP pyrophosphatase 1##NM_024096|DCTPP1|79077|dCTP pyrophosphatase 1##NM_001114380|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##NM_002209|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK314246|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##BC008777|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK298674|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##Y00796|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK303190|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)	0.0	
chr20	50859422	50859516	reg1020604.p2	4.162	+	BC012759 BC041622 NM_018197 NM_022088 NM_199426 NM_199427	-50946	-	BT009760 AB527686 BC021087 AK001744 TSC_hg19_v1_chr20_-_50808313 AK090547 BC031524 AK001596 AK222712	-51214	-	AY170621 AY170622 AY172738 BC111714 AK001666 NM_020436	-440473	-	BX640770 NM_173485	729476	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	730309	+	AK302570 NM_001193421	942352	+	BC012759|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC041622|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_018197|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_022088|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199426|ZFP64|55734|zinc finger protein 64 homolog (mouse)##NM_199427|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BT009760|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC021087|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001744|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK090547|ZFP64|55734|zinc finger protein 64 homolog (mouse)##BC031524|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK001596|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AK222712|ZFP64|55734|zinc finger protein 64 homolog (mouse)##AY170621|SALL4|57167|sal-like 4 (Drosophila)##AY170622|SALL4|57167|sal-like 4 (Drosophila)##AY172738|SALL4|57167|sal-like 4 (Drosophila)##BC111714|SALL4|57167|sal-like 4 (Drosophila)##AK001666|SALL4|57167|sal-like 4 (Drosophila)##NM_020436|SALL4|57167|sal-like 4 (Drosophila)##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2##AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2	0.997806	
chr2	11970156	11970336	reg1012905.p3	4.162	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-83471	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-159955	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-287403	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	887007	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	887670	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	888151	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.0	
chr2	204973077	204973246	reg1035107.p1	4.162	+	AK314985 AJ277832 NM_012092 BC028006 BC028210 AB023135 AF218312 CU688368 CU688430	-171667	+	BC070162 AF414120 NM_001037631 NM_005214 AK313732 BC069566 BC074893 BC074842 AB590653 AF486806 AY209009 AY792514 AY999702 DQ785106 L15006	-240574	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	-401762	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	437329	+	TSC_hg19_v1_chr2_+_205410560 AX765687 AX765741 AK056157	437433	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	437558	+	AK314985|ICOS|29851|inducible T-cell co-stimulator##AJ277832|ICOS|29851|inducible T-cell co-stimulator##NM_012092|ICOS|29851|inducible T-cell co-stimulator##BC028006|ICOS|29851|inducible T-cell co-stimulator##BC028210|ICOS|29851|inducible T-cell co-stimulator##AB023135|ICOS|29851|inducible T-cell co-stimulator##BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK056157|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)	1.025152	CTCF.p2:6:0.848
chr5	173738772	173738952	reg1000930.p1	4.162	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-266110	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	-266151	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	-322672	+	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	412750	+	NM_000794	1132300	-	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	1166700	+	AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##NM_000794|DRD1|1812|dopamine receptor D1##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1	0.0	
chr7	73515528	73515709	reg1032880.p1	4.162	+	NM_001204426 TSC_hg19_v1_chr7_+_73507550 AK300382	-8101	+	TSC_hg19_v1_chr7_+_73498325 AB385563 AF134379	-17284	+	TSC_hg19_v1_chr7_+_73498160 D26309	-17463	+	TSC_hg19_v1_chr7_+_73588678 AK314749 AK297651	73023	+	TSC_hg19_v1_chr7_+_73588685 AK290676 BC066928 D26068 NM_022170 NM_031992 BC010021 BC021214 AB385268 DQ891924 DQ895111 DQ895112	73085	+	NM_014146 NM_032463 NM_032464	108468	+	NM_001204426|LIMK1|3984|LIM domain kinase 1##AK300382|LIMK1|3984|LIM domain kinase 1##AF134379|LIMK1|3984|LIM domain kinase 1##D26309|LIMK1|3984|LIM domain kinase 1##AK314749|EIF4H|7458|eukaryotic translation initiation factor 4H##AK297651|EIF4H|7458|eukaryotic translation initiation factor 4H##AK290676|EIF4H|7458|eukaryotic translation initiation factor 4H##BC066928|EIF4H|7458|eukaryotic translation initiation factor 4H##D26068|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_022170|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_031992|EIF4H|7458|eukaryotic translation initiation factor 4H##BC010021|EIF4H|7458|eukaryotic translation initiation factor 4H##BC021214|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ891924|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ895111|EIF4H|7458|eukaryotic translation initiation factor 4H##DQ895112|EIF4H|7458|eukaryotic translation initiation factor 4H##NM_014146|LAT2|7462|linker for activation of T cells family, member 2##NM_032463|LAT2|7462|linker for activation of T cells family, member 2##NM_032464|LAT2|7462|linker for activation of T cells family, member 2	0.0	
chr7	86682652	86682814	reg1036973.p2	4.162	+	AK296250 NM_152748	-87487	-	X77748 TSC_hg19_v1_chr7_+_86274130 DQ315361 DQ315362 DQ315363	-408617	+	AK294701 TSC_hg19_v1_chr7_+_86274004 BC022496	-408742	+	TSC_hg19_v1_chr7_-_86688965 NM_001142749	6245	-	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	98980	+	NM_021145 TSC_hg19_v1_chr7_+_86781946 BC070064	99204	+	AK296250|KIAA1324L|222223|KIAA1324-like##NM_152748|KIAA1324L|222223|KIAA1324-like##X77748|GRM3|2913|glutamate receptor, metabotropic 3##DQ315361|GRM3|2913|glutamate receptor, metabotropic 3##DQ315362|GRM3|2913|glutamate receptor, metabotropic 3##DQ315363|GRM3|2913|glutamate receptor, metabotropic 3##AK294701|GRM3|2913|glutamate receptor, metabotropic 3##BC022496|GRM3|2913|glutamate receptor, metabotropic 3##NM_001142749|KIAA1324L|222223|KIAA1324-like##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_021145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BC070064|DMTF1|9988|cyclin D binding myb-like transcription factor 1	0.241164	CTCF.p2:37:0.241
chr8	20042448	20042560	reg1035475.p1	4.162	+	AK313720 BC006317 BC009387 NM_001135691 NM_001142324 NM_001142325 NM_003053 U39905	-1840	-	TSC_hg19_v1_chr8_+_19796933 AB384743 BT006726 CR457054 DQ893541 DQ893751	-245564	+	X14390 TSC_hg19_v1_chr8_+_19796864 BC011353	-245639	+	NM_001693 TSC_hg19_v1_chr8_+_20054882	12288	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	12389	+	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	12418	+	AK313720|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##BC006317|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##BC009387|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001135691|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001142324|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001142325|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_003053|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##U39905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##BT006726|LPL|4023|lipoprotein lipase##CR457054|LPL|4023|lipoprotein lipase##DQ893541|LPL|4023|lipoprotein lipase##DQ893751|LPL|4023|lipoprotein lipase##X14390|LPL|4023|lipoprotein lipase##BC011353|LPL|4023|lipoprotein lipase##NM_001693|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2	0.981637	CTCF.p2:21:0.982
chr8	23606621	23606704	reg1031880.p1	4.162	+	AB464642 NM_001136271	-42552	-	AB464643 AF249669 AF249670 AF249671 AF249672 EU446642 U91540 U80669 BC074863 BC074864 BC111569 BC111574 AF247704 NM_006167 TSC_hg19_v1_chr8_-_23540449	-66231	-	BC033834 BC069168 TSC_hg19_v1_chr8_+_23427607 AF116640	-179111	+	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	105649	-	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	544945	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	635245	+	AB464642|NKX2-6|137814|NK2 homeobox 6##NM_001136271|NKX2-6|137814|NK2 homeobox 6##AF249669|NKX3-1|4824|NK3 homeobox 1##AF249670|NKX3-1|4824|NK3 homeobox 1##AF249671|NKX3-1|4824|NK3 homeobox 1##AF249672|NKX3-1|4824|NK3 homeobox 1##EU446642|NKX3-1|4824|NK3 homeobox 1##U91540|NKX3-1|4824|NK3 homeobox 1##U80669|NKX3-1|4824|NK3 homeobox 1##BC074863|NKX3-1|4824|NK3 homeobox 1##BC074864|NKX3-1|4824|NK3 homeobox 1##AF247704|NKX3-1|4824|NK3 homeobox 1##NM_006167|NKX3-1|4824|NK3 homeobox 1##BC033834|SLC25A37|51312|solute carrier family 25, member 37##AF116640|SLC25A37|51312|solute carrier family 25, member 37##BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1	0.769752	CTCF.p2:3:0.770
chr9	20622338	20622507	reg1026003.p3	4.162	+	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-835471	-	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-1213419	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-1242195	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	26	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	74	-	AK056522 AY139834 NM_017794	35885	+	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797	0.0	
chrUn_gl000212	115754	115861	reg1031614.p1	4.162	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.973443	CTCF.p2:-4:0.973
chr10	26662100	26662281	reg1033005.p2	4.161	+	M74826 BC029517 M81882 TSC_hg19_v1_chr10_+_26505702 BC126327 BC126329 AB527954 HQ258311	-156525	+	NM_000818 NM_001134366	-156955	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	-439010	+	TSC_hg19_v1_chr10_+_26727269 NM_019043	65081	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	65127	+	TSC_hg19_v1_chr10_+_26727679 BC054516	65478	+	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##HQ258311|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA##NM_019043|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	0.8082	CTCF.p2:100:0.725
chr11	121322979	121323071	reg1034500.p1	4.161	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	-76	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	-159471	+	TSC_hg19_v1_chr11_+_121163484 AK096847 AK223141 AK222686	-159543	+	TSC_hg19_v1_chr11_+_121323112 AK309523	150	+	TSC_hg19_v1_chr11_+_121461071 AK294404	138073	+	BC130361 BC130363 AF303179 NM_001001786	663836	-	NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK096847|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK223141|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK222686|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer	0.40418	CTCF.p2:-4:0.404
chr13	52027179	52027245	reg1023861.p2	4.161	+	AF097645 BC039829 BC018725 BC013358 BC032386 TSC_hg19_v1_chr13_-_52027173 AK296801 AK304218	-59	-	AX772926 NM_001101320 AM402969	-112017	+	TSC_hg19_v1_chr13_+_51796507 BC034497 NM_001242312 NM_145019 AK055269 AK096364 BC051771 AB527542 CU690842	-230696	+	NM_001039937 NM_001039938 NM_012141 AL833524 TSC_hg19_v1_chr13_-_52027409	130	-	TSC_hg19_v1_chr13_+_52027481 BC030118 BC045725	261	+	TSC_hg19_v1_chr13_+_52034640 D28359	7428	+	AF097645|INTS6|26512|integrator complex subunit 6##BC039829|INTS6|26512|integrator complex subunit 6##BC018725|INTS6|26512|integrator complex subunit 6##BC013358|INTS6|26512|integrator complex subunit 6##BC032386|INTS6|26512|integrator complex subunit 6##AK296801|INTS6|26512|integrator complex subunit 6##AK304218|INTS6|26512|integrator complex subunit 6##AX772926|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##NM_001101320|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AM402969|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##BC034497|FAM124A|220108|family with sequence similarity 124A##NM_001242312|FAM124A|220108|family with sequence similarity 124A##NM_145019|FAM124A|220108|family with sequence similarity 124A##AK055269|FAM124A|220108|family with sequence similarity 124A##AK096364|FAM124A|220108|family with sequence similarity 124A##BC051771|FAM124A|220108|family with sequence similarity 124A##NM_001039937|INTS6|26512|integrator complex subunit 6##NM_001039938|INTS6|26512|integrator complex subunit 6##NM_012141|INTS6|26512|integrator complex subunit 6##AL833524|INTS6|26512|integrator complex subunit 6	0.0	
chr16	17353290	17353402	reg1018715.p2	4.161	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-1026816	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1026858	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-1026864	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	211459	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1220045	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1444750	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr17	6918162	6918229	reg1033787.p1	4.161	+	TSC_hg19_v1_chr17_+_6918100 AK295795 BC040036	-88	+	NM_001142798 NM_001142799 NM_174893 TSC_hg19_v1_chr17_+_6918071 AK055800	-127	+	TSC_hg19_v1_chr17_+_6915973 BC040148	-2220	+	TSC_hg19_v1_chr17_+_6926368 BC059404 NM_181844 AK293102 AK292878 AB076580	8182	+	TSC_hg19_v1_chr17_+_6926416 AK122893	8222	+	TSC_hg19_v1_chr17_+_6939347 BC142618 NM_201566	21190	+	AK295795|C17orf49|124944|chromosome 17 open reading frame 49##BC040036|C17orf49|124944|chromosome 17 open reading frame 49##NM_001142798|C17orf49|124944|chromosome 17 open reading frame 49##NM_001142799|C17orf49|124944|chromosome 17 open reading frame 49##NM_174893|C17orf49|124944|chromosome 17 open reading frame 49##AK055800|C17orf49|124944|chromosome 17 open reading frame 49##BC040148|RNASEK-C17ORF49|100529209|RNASEK-C17orf49 readthrough##BC059404|BCL6B|255877|B-cell CLL/lymphoma 6, member B##NM_181844|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AK293102|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AK292878|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AB076580|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AK122893|BCL6B|255877|B-cell CLL/lymphoma 6, member B##BC142618|SLC16A13|201232|solute carrier family 16, member 13 (monocarboxylic acid transporter 13)##NM_201566|SLC16A13|201232|solute carrier family 16, member 13 (monocarboxylic acid transporter 13)	0.715415	CTCF.p2:31:0.501	CTCF.p2:43:0.214
chr1	9471199	9471314	reg1031295.p2	4.161	+	TSC_hg19_v1_chr1_+_9415945 CU677397	-55310	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	-118287	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	-118319	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	128276	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	128380	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	177700	+	AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201	0.0	
chr6	70429631	70429722	reg1032210.p1	4.161	+	TSC_hg19_v1_chr6_+_69345227 NM_001704 AB011122 AK289696	-1084275	+	AL833240 TSC_hg19_v1_chr6_-_69345026	-1084704	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	-1830648	-	TSC_hg19_v1_chr6_-_70506472 AB074281	76801	-	TSC_hg19_v1_chr6_-_70506524 AK290069	76852	-	AF113224 TSC_hg19_v1_chr6_-_70506799 BC010360 AK225537 AK002102 AK225187	77111	-	NM_001704|BAI3|577|brain-specific angiogenesis inhibitor 3##AB011122|BAI3|577|brain-specific angiogenesis inhibitor 3##AK289696|BAI3|577|brain-specific angiogenesis inhibitor 3##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3##AB074281|LMBRD1|55788|LMBR1 domain containing 1##AK290069|LMBRD1|55788|LMBR1 domain containing 1##AF113224|LMBRD1|55788|LMBR1 domain containing 1##BC010360|LMBRD1|55788|LMBR1 domain containing 1##AK225537|LMBRD1|55788|LMBR1 domain containing 1##AK002102|LMBRD1|55788|LMBR1 domain containing 1##AK225187|LMBRD1|55788|LMBR1 domain containing 1	0.917252	CTCF.p2:9:0.807
chr9	6107164	6107295	reg1035488.p2	4.161	+	AF039023 AK300408 BC098406 TSC_hg19_v1_chr9_-_6015616 AK307840 BX537405 NM_001243202 NM_001243203 NM_012416	-91598	-	TSC_hg19_v1_chr9_-_6007953 NM_001017969	-99265	-	BC108654 TSC_hg19_v1_chr9_-_5968443	-138821	-	NM_001199640 NM_001199641 NM_033439 AK295908 AK313414 TSC_hg19_v1_chr9_+_6215806 AK303943 BC047085	108567	+	NM_001001874 NM_001001875 NM_033516 AK057479 AY032877 BC017589 BC042113 BC033792	221146	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	305915	+	AF039023|RANBP6|26953|RAN binding protein 6##AK300408|RANBP6|26953|RAN binding protein 6##BC098406|RANBP6|26953|RAN binding protein 6##BX537405|RANBP6|26953|RAN binding protein 6##NM_001243202|RANBP6|26953|RAN binding protein 6##NM_001243203|RANBP6|26953|RAN binding protein 6##NM_012416|RANBP6|26953|RAN binding protein 6##NM_001017969|KIAA2026|158358|KIAA2026##NM_001199640|IL33|90865|interleukin 33##NM_001199641|IL33|90865|interleukin 33##NM_033439|IL33|90865|interleukin 33##AK295908|IL33|90865|interleukin 33##AK313414|IL33|90865|interleukin 33##AK303943|IL33|90865|interleukin 33##BC047085|IL33|90865|interleukin 33##NM_001001874|TPD52L3|89882|tumor protein D52-like 3##NM_001001875|TPD52L3|89882|tumor protein D52-like 3##NM_033516|TPD52L3|89882|tumor protein D52-like 3##AK057479|TPD52L3|89882|tumor protein D52-like 3##AY032877|TPD52L3|89882|tumor protein D52-like 3##BC017589|TPD52L3|89882|tumor protein D52-like 3##BC042113|TPD52L3|89882|tumor protein D52-like 3##BC033792|TPD52L3|89882|tumor protein D52-like 3##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2	0.396957	CTCF.p2:-4:0.397
chrX	40126821	40127002	reg1013937.p2	4.161	+	BC114220 NM_001123383 NM_001123384	-90330	-	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	-170219	-	TSC_hg19_v1_chrX_+_38663536 AK001248	-1463371	+	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	313275	+	AF291814 TSC_hg19_v1_chrX_+_40440231 AK293510 BC084541 AK297007 AF109363	313331	+	TSC_hg19_v1_chrX_+_40440264 AK314633 AK315948	313361	+	BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF291814|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK293510|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##BC084541|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK297007|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF109363|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK314633|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK315948|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.0	
chr11	108337855	108337934	reg1033152.p1	4.160	+	TSC_hg19_v1_chr11_+_108093793 AB209133 U33841	-244097	+	NM_000051	-244336	+	D83243 BC050561 TSC_hg19_v1_chr11_-_108093366 BC040356 BC094769 AK290020 NM_002519	-244522	-	BC059411 BC029536 AK303096 NM_152587	348	-	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	31301	-	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	126510	-	AB209133|ATM|472|ataxia telangiectasia mutated##U33841|ATM|472|ataxia telangiectasia mutated##NM_000051|ATM|472|ataxia telangiectasia mutated##D83243|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC050561|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC040356|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC094769|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AK290020|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##NM_002519|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC029536|C11orf65|160140|chromosome 11 open reading frame 65##AK303096|C11orf65|160140|chromosome 11 open reading frame 65##NM_152587|C11orf65|160140|chromosome 11 open reading frame 65##AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5	0.0	
chr11	122627264	122627374	reg1031513.p2	4.160	+	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	-100772	+	BC130361 BC130363 AF303179 NM_001001786	-640458	-	TSC_hg19_v1_chr11_+_121461071 AK294404	-1166221	+	BC070266 AK313578 AF001622 NM_019604	81910	+	AK097534 BC068507 NM_024806 NM_199124	126112	+	AB231738 NM_001098169	225037	-	NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC070266|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK313578|CRTAM|56253|cytotoxic and regulatory T cell molecule##AF001622|CRTAM|56253|cytotoxic and regulatory T cell molecule##NM_019604|CRTAM|56253|cytotoxic and regulatory T cell molecule##AK097534|C11orf63|79864|chromosome 11 open reading frame 63##BC068507|C11orf63|79864|chromosome 11 open reading frame 63##NM_024806|C11orf63|79864|chromosome 11 open reading frame 63##NM_199124|C11orf63|79864|chromosome 11 open reading frame 63##AB231738|BSX|390259|brain-specific homeobox##NM_001098169|BSX|390259|brain-specific homeobox	0.0	
chr16	11346023	11346203	reg1029495.p2	4.160	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-307670	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-309878	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-309947	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	3937	-	X63758 BC096135 BC096136 BC096137 NM_005425	17025	-	NM_021247	21338	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr19	17295158	17295339	reg1028672.p3	4.160	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-108655	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-108927	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-157708	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	30924	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	30957	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	41786	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.035886	
chr22	25729575	25729754	reg1006715.p1	4.160	+	NM_000496	-114053	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	-133820	+	TSC_hg19_v1_chr22_+_25591072 AK025418	-138535	+	AL137651 NM_182492	28859	-	BC139736 NM_001135772	47879	-	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	114412	+	NM_000496|CRYBB2|1415|crystallin, beta B2##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##AK025418|KIAA1671|85379|KIAA1671##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1	0.0	
chr2	80087776	80087933	reg1035875.p1	4.160	+	TSC_hg19_v1_chr2_+_79740175 AK295181	-347639	+	NM_001164883 NM_004389 BC052996 TSC_hg19_v1_chr2_+_79740147 BC040458	-347746	+	AK291973 AK311523 AK311523 AK311526 NM_138938 NM_002580 NM_138937	-700976	-	AB587576 AY182024 HQ257885 TSC_hg19_v1_chr2_-_80530981	443109	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	443671	-	TSC_hg19_v1_chr2_-_80531719 AK290512	443871	-	AK295181|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_001164883|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_004389|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC052996|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC040458|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##AK291973|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311526|REG3A|5068|regenerating islet-derived 3 alpha##NM_138938|REG3A|5068|regenerating islet-derived 3 alpha##NM_002580|REG3A|5068|regenerating islet-derived 3 alpha##NM_138937|REG3A|5068|regenerating islet-derived 3 alpha##AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##HQ257885|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	1.010199	CTCF.p2:38:0.979
chr6_ssto_hap7	1058677	1058743	reg1033471.p2	4.160	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr10	122358108	122358205	reg1036039.p1	4.159	+	NM_001030059 TSC_hg19_v1_chr10_+_122216486 BC101267 BC101268 BC101269 BC122535 BC132787 AK296273 HQ258170 AK310178	-141517	+	NM_007190 TSC_hg19_v1_chr10_+_121652241 AB019435 AK021846 AK314592 AK001135 AK001135 AK301517 BC063800 BC063800 BC002540 AF116723 BX649119 BX649119 AB384691 CU687818 BT006755	-705967	+	AK023143 TSC_hg19_v1_chr10_-_121632359 BC004183 BC007219 NM_024834	-725816	-	NM_018117 TSC_hg19_v1_chr10_+_122610771	252572	+	TSC_hg19_v1_chr10_+_122610873 BC040469 AB037772 AK299524 AF320223 AK301761 BC071564 AK315145 AB385454	252739	+	AB084153 EF057068 EU826598 EU826599 EU826600 EU826601 AB587574 M55614 Z71929 X56191 NM_001144913 NM_001144914	995249	-	NM_001030059|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101267|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101268|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101269|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC122535|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC132787|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##HQ258170|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AK310178|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##NM_007190|SEC23IP|11196|SEC23 interacting protein##AB019435|SEC23IP|11196|SEC23 interacting protein##AK021846|SEC23IP|11196|SEC23 interacting protein##AK314592|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK001135|SEC23IP|11196|SEC23 interacting protein##AK301517|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC063800|SEC23IP|11196|SEC23 interacting protein##BC002540|SEC23IP|11196|SEC23 interacting protein##AF116723|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BX649119|SEC23IP|11196|SEC23 interacting protein##BT006755|SEC23IP|11196|SEC23 interacting protein##AK023143|MCMBP|79892|minichromosome maintenance complex binding protein##BC004183|MCMBP|79892|minichromosome maintenance complex binding protein##BC007219|MCMBP|79892|minichromosome maintenance complex binding protein##NM_024834|MCMBP|79892|minichromosome maintenance complex binding protein##NM_018117|WDR11|55717|WD repeat domain 11##BC040469|WDR11|55717|WD repeat domain 11##AB037772|WDR11|55717|WD repeat domain 11##AK299524|WDR11|55717|WD repeat domain 11##AF320223|WDR11|55717|WD repeat domain 11##AK301761|WDR11|55717|WD repeat domain 11##BC071564|WDR11|55717|WD repeat domain 11##AK315145|WDR11|55717|WD repeat domain 11##AB084153|FGFR2|2263|fibroblast growth factor receptor 2##EF057068|FGFR2|2263|fibroblast growth factor receptor 2##EU826598|FGFR2|2263|fibroblast growth factor receptor 2##EU826599|FGFR2|2263|fibroblast growth factor receptor 2##EU826600|FGFR2|2263|fibroblast growth factor receptor 2##EU826601|FGFR2|2263|fibroblast growth factor receptor 2##M55614|FGFR2|2263|fibroblast growth factor receptor 2##Z71929|FGFR2|2263|fibroblast growth factor receptor 2##X56191|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144913|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144914|FGFR2|2263|fibroblast growth factor receptor 2	0.4024	CTCF.p2:-18:0.402
chr10	34927341	34927500	reg1009561.p2	4.159	+	TSC_hg19_v1_chr10_-_33623996 BX648025	-1303422	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1303606	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	-1303967	-	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	176731	-	AK310225 AK300491 NM_001198778 NM_001198779	435792	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	451852	-	BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2	0.0	
chr11	96000961	96001086	reg1031562.p2	4.159	+	BC052990 BC012086 TSC_hg19_v1_chr11_-_95657272 BC034474 BX647997 NM_001243571 NM_016156 NM_201278 NM_201281 AB028996	-343667	-	AK293243 TSC_hg19_v1_chr11_-_95657092 AK302940 BC040432 AK291277	-343972	-	D42054 BC039711 BC029385 AB385276 AY225092 CU691748 TSC_hg19_v1_chr11_+_95523869	-477183	+	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	75380	-	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	122019	-	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	122151	+	BC052990|MTMR2|8898|myotubularin related protein 2##BC012086|MTMR2|8898|myotubularin related protein 2##BC034474|MTMR2|8898|myotubularin related protein 2##BX647997|MTMR2|8898|myotubularin related protein 2##NM_001243571|MTMR2|8898|myotubularin related protein 2##NM_016156|MTMR2|8898|myotubularin related protein 2##NM_201278|MTMR2|8898|myotubularin related protein 2##NM_201281|MTMR2|8898|myotubularin related protein 2##AB028996|MTMR2|8898|myotubularin related protein 2##AK293243|MTMR2|8898|myotubularin related protein 2##AK302940|MTMR2|8898|myotubularin related protein 2##BC040432|MTMR2|8898|myotubularin related protein 2##AK291277|MTMR2|8898|myotubularin related protein 2##D42054|CEP57|9702|centrosomal protein 57kDa##BC039711|CEP57|9702|centrosomal protein 57kDa##BC029385|CEP57|9702|centrosomal protein 57kDa##AY225092|CEP57|9702|centrosomal protein 57kDa##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)	0.0	
chr4	11430080	11430260	reg1010618.p2	4.159	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-743769	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-971160	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-1311634	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	362	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2055781	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2055805	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr5	149184483	149184662	reg1034338.p2	4.159	+	AK123614 NM_001172699	-33070	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	-74696	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	-74745	+	BC144044 BC035909 AB593141 M26061 NM_000440	139746	-	TSC_hg19_v1_chr5_+_149340320 NM_000112	155736	+	TSC_hg19_v1_chr5_+_149340352 AK312596	155779	+	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144044|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##BC035909|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##AB593141|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##M26061|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000440|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2	0.0	
chr6	34639724	34639895	reg1028548.p1	4.159	+	AB031549 BC021299 AF071538 AK301543 NM_001252294 NM_012391	-115713	-	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	-157155	+	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	-205905	+	TSC_hg19_v1_chr6_-_34664565 AK313410 BC002328 BC010184 AK056964 BC075810	24737	-	TSC_hg19_v1_chr6_-_34664631 NM_022758 NM_024294	24817	-	NM_003093	85061	+	AB031549|SPDEF|25803|SAM pointed domain containing ets transcription factor##BC021299|SPDEF|25803|SAM pointed domain containing ets transcription factor##AF071538|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK301543|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_001252294|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_012391|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK313410|C6orf106|64771|chromosome 6 open reading frame 106##BC002328|C6orf106|64771|chromosome 6 open reading frame 106##BC010184|C6orf106|64771|chromosome 6 open reading frame 106##AK056964|C6orf106|64771|chromosome 6 open reading frame 106##BC075810|C6orf106|64771|chromosome 6 open reading frame 106##NM_022758|C6orf106|64771|chromosome 6 open reading frame 106##NM_024294|C6orf106|64771|chromosome 6 open reading frame 106##NM_003093|SNRPC|6631|small nuclear ribonucleoprotein polypeptide C	0.0	
chr7	976146	976256	reg1027064.p1	4.159	+	AK300644 AK300859 TSC_hg19_v1_chr7_-_960513	-15687	-	TSC_hg19_v1_chr7_+_916249 BC003550 AK023560 AF132954	-59931	+	TSC_hg19_v1_chr7_+_916188 NM_015949	-59998	+	TSC_hg19_v1_chr7_-_994129 AB587419 BC033747	17914	-	TSC_hg19_v1_chr7_-_994317 NM_006869	18112	-	TSC_hg19_v1_chr7_-_994377 AJ006422	18262	-	AK300644|ADAP1|11033|ArfGAP with dual PH domains 1##AK300859|ADAP1|11033|ArfGAP with dual PH domains 1##BC003550|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK023560|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AF132954|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##NM_015949|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##BC033747|ADAP1|11033|ArfGAP with dual PH domains 1##NM_006869|ADAP1|11033|ArfGAP with dual PH domains 1##AJ006422|ADAP1|11033|ArfGAP with dual PH domains 1	0.0	
chr9	99915626	99915761	reg1035873.p2	4.159	+	AK312806 NM_001201575	-113769	-	AF070448 BC023504 Y14734 AB001928 AK310645 AK310740 BC110512 AY358641 NM_001333	-114215	-	TSC_hg19_v1_chr9_-_99775872 BC005058	-139793	-	NM_020893 CR749320	154245	+	TSC_hg19_v1_chr9_+_100174364 NM_014290 BC028694	258580	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	258686	+	AK312806|CTSL2|1515|cathepsin L2##NM_001201575|CTSL2|1515|cathepsin L2##AF070448|CTSL2|1515|cathepsin L2##BC023504|CTSL2|1515|cathepsin L2##Y14734|CTSL2|1515|cathepsin L2##AB001928|CTSL2|1515|cathepsin L2##AK310645|CTSL2|1515|cathepsin L2##AK310740|CTSL2|1515|cathepsin L2##BC110512|CTSL2|1515|cathepsin L2##AY358641|CTSL2|1515|cathepsin L2##NM_001333|CTSL2|1515|cathepsin L2##BC005058|HIATL2|84278|hippocampus abundant transcript-like 2##NM_020893|C9orf174|100499483|chromosome 9 open reading frame 174##CR749320|C9orf174|100499483|chromosome 9 open reading frame 174##NM_014290|TDRD7|23424|tudor domain containing 7##BC028694|TDRD7|23424|tudor domain containing 7##AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7	0.016821	
chr12	54798327	54798432	reg1034243.p1	4.158	+	TSC_hg19_v1_chr12_-_54785083 AK024404 BC029752 AK315613 NM_001130967 NM_001130968	-13291	-	AB593085 TSC_hg19_v1_chr12_-_54779552 AK092724 AY461717	-18845	-	AK296564 TSC_hg19_v1_chr12_-_54778485 AF304052 NM_015481	-19905	-	M13918 TSC_hg19_v1_chr12_-_54813000 CU679109 DQ892690 EU176722 AB385038 AK291570 AK311051	14589	-	TSC_hg19_v1_chr12_-_54813005 AK304696 X06256	14625	-	TSC_hg19_v1_chr12_-_54813025 BC008786 AK312414 NM_002205	14656	-	AK024404|ZNF385A|25946|zinc finger protein 385A##BC029752|ZNF385A|25946|zinc finger protein 385A##AK315613|ZNF385A|25946|zinc finger protein 385A##NM_001130967|ZNF385A|25946|zinc finger protein 385A##NM_001130968|ZNF385A|25946|zinc finger protein 385A##AB593085|ZNF385A|25946|zinc finger protein 385A##AK092724|ZNF385A|25946|zinc finger protein 385A##AY461717|ZNF385A|25946|zinc finger protein 385A##AK296564|ZNF385A|25946|zinc finger protein 385A##AF304052|ZNF385A|25946|zinc finger protein 385A##NM_015481|ZNF385A|25946|zinc finger protein 385A##M13918|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##DQ892690|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##EU176722|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK291570|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK311051|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK304696|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##X06256|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##BC008786|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##AK312414|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)##NM_002205|ITGA5|3678|integrin, alpha 5 (fibronectin receptor, alpha polypeptide)	0.858105	CTCF.p2:-5:0.858
chr15	84506823	84506956	reg1033036.p1	4.158	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-184062	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-390661	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-390829	+	NM_001243531	334352	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	637392	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	690583	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.790077	CTCF.p2:29:0.790
chr2	138596326	138596503	reg1005639.p2	4.158	+	NM_001080427	-847953	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-1073298	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-1720738	-	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	125520	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	662979	+	TSC_hg19_v1_chr2_+_139259500 AK021919	663076	+	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like	0.0	
chr2	232227045	232227184	reg1030962.p1	4.158	+	TSC_hg19_v1_chr2_+_232120778 AB055779	-106336	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-163720	+	AY219922 TSC_hg19_v1_chr2_+_232063378	-163736	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	33308	+	AK001314 TSC_hg19_v1_chr2_-_232326464	99315	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	102021	-	AY929062|ARMC9|80210|armadillo repeat containing 9##AY219922|ARMC9|80210|armadillo repeat containing 9##AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK001314|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin	0.0	
chr3	58284813	58284886	reg1032116.p2	4.158	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	-61319	+	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	-61566	+	NM_004944	-84452	-	TSC_hg19_v1_chr3_+_58291985 NM_001098783 NM_007042	7121	+	TSC_hg19_v1_chr3_+_58292000 AF001175	7151	+	TSC_hg19_v1_chr3_+_58292022 BC012017 BC002441 BC007342	7168	+	AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_001098783|RPP14|11102|ribonuclease P/MRP 14kDa subunit##NM_007042|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AF001175|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC012017|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC002441|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC007342|RPP14|11102|ribonuclease P/MRP 14kDa subunit	0.010889	
chr16	25025597	25025693	reg1030188.p1	4.157	+	AK125358 TSC_hg19_v1_chr16_-_24968918	-56753	-	TSC_hg19_v1_chr16_-_24942663 AK001170	-82954	-	AY044906 NM_052944 AK298373 AK125267	-168052	+	AJ306731 AJ306732 TSC_hg19_v1_chr16_-_25026604	967	-	TSC_hg19_v1_chr16_-_25026691 AK027567 AK291691 BC080195 AK301500 NM_001006634 NM_018054	1047	-	TSC_hg19_v1_chr16_+_25078227 BC023651 AK093382	52644	+	AK125358|ARHGAP17|55114|Rho GTPase activating protein 17##AK001170|ARHGAP17|55114|Rho GTPase activating protein 17##AY044906|SLC5A11|115584|solute carrier family 5 (sodium/glucose cotransporter), member 11##NM_052944|SLC5A11|115584|solute carrier family 5 (sodium/glucose cotransporter), member 11##AK298373|SLC5A11|115584|solute carrier family 5 (sodium/glucose cotransporter), member 11##AK125267|SLC5A11|115584|solute carrier family 5 (sodium/glucose cotransporter), member 11##AJ306731|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306732|ARHGAP17|55114|Rho GTPase activating protein 17##AK027567|ARHGAP17|55114|Rho GTPase activating protein 17##AK291691|ARHGAP17|55114|Rho GTPase activating protein 17##BC080195|ARHGAP17|55114|Rho GTPase activating protein 17##AK301500|ARHGAP17|55114|Rho GTPase activating protein 17##NM_001006634|ARHGAP17|55114|Rho GTPase activating protein 17##NM_018054|ARHGAP17|55114|Rho GTPase activating protein 17##BC023651|LOC283887|283887|uncharacterized LOC283887##AK093382|LOC283887|283887|uncharacterized LOC283887	0.0	
chr19	18390517	18390679	reg1008567.p2	4.157	+	AK057466 AK302431 AL136867 BC112932 NM_001145304 NM_001145305 NM_025249	-5356	-	NM_000923 U66346	-31589	-	AK300888 AK300983 TSC_hg19_v1_chr19_-_18337249 NM_001098818 U88713	-53339	-	TSC_hg19_v1_chr19_+_18391286 AB593186	683	+	BC169275 TSC_hg19_v1_chr19_-_18391478	861	-	BC169273 TSC_hg19_v1_chr19_-_18392160 X51346	1507	-	AK057466|KIAA1683|80726|KIAA1683##AK302431|KIAA1683|80726|KIAA1683##AL136867|KIAA1683|80726|KIAA1683##BC112932|KIAA1683|80726|KIAA1683##NM_001145304|KIAA1683|80726|KIAA1683##NM_001145305|KIAA1683|80726|KIAA1683##NM_025249|KIAA1683|80726|KIAA1683##NM_000923|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U66346|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK300888|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##AK300983|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##NM_001098818|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##U88713|PDE4C|5143|phosphodiesterase 4C, cAMP-specific##BC169273|JUND|3727|jun D proto-oncogene##X51346|JUND|3727|jun D proto-oncogene	0.0	
chr19	47628442	47628535	reg1005218.p1	4.157	+	AB028987 NM_015168 TSC_hg19_v1_chr19_-_47617034	-11466	-	TSC_hg19_v1_chr19_-_47615825 AB384098	-12665	-	AK125279 TSC_hg19_v1_chr19_-_47615487	-13002	-	TSC_hg19_v1_chr19_+_47634114 NM_001145713 NM_001145714 NM_005500 AK021978 AK055481 AK302287 AK027595	5591	+	TSC_hg19_v1_chr19_+_47634121 BC018271 BC000344 AF161489	5637	+	TSC_hg19_v1_chr19_+_47634145 AK315624 AF090385 AF046025 AK090645	5651	+	AB028987|ZC3H4|23211|zinc finger CCCH-type containing 4##NM_015168|ZC3H4|23211|zinc finger CCCH-type containing 4##AK125279|ZC3H4|23211|zinc finger CCCH-type containing 4##NM_001145713|SAE1|10055|SUMO1 activating enzyme subunit 1##NM_001145714|SAE1|10055|SUMO1 activating enzyme subunit 1##NM_005500|SAE1|10055|SUMO1 activating enzyme subunit 1##AK021978|SAE1|10055|SUMO1 activating enzyme subunit 1##AK055481|SAE1|10055|SUMO1 activating enzyme subunit 1##AK302287|SAE1|10055|SUMO1 activating enzyme subunit 1##AK027595|SAE1|10055|SUMO1 activating enzyme subunit 1##BC018271|SAE1|10055|SUMO1 activating enzyme subunit 1##BC000344|SAE1|10055|SUMO1 activating enzyme subunit 1##AF161489|SAE1|10055|SUMO1 activating enzyme subunit 1##AK315624|SAE1|10055|SUMO1 activating enzyme subunit 1##AF090385|SAE1|10055|SUMO1 activating enzyme subunit 1##AF046025|SAE1|10055|SUMO1 activating enzyme subunit 1##AK090645|SAE1|10055|SUMO1 activating enzyme subunit 1	0.0	
chr6	16483921	16484096	reg1031969.p2	4.157	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-245157	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-340698	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-354571	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	277689	-	NM_001190766	618480	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	797846	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.0	
chr6	5671978	5672088	reg1032256.p1	4.157	+	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-410343	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-410771	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-410867	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	335108	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	335664	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	648852	-	NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide	0.0	
chr7	120498189	120498281	reg1024561.p3	4.157	+	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	-75	-	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	-215	-	AK307139 AB028967 NM_012281	-584531	+	AK000096 NM_019071 NM_198267 TSC_hg19_v1_chr7_+_120590832 AF161419 BC009777 BC093091 AY007790 AK291905 AF074968 BC073865 AF180298 BC062634 BC093689 BC101609 BC143316 BC009776 BC010851 BC146417 BC153171 AB463778	92646	+	TSC_hg19_v1_chr7_+_120628742 NM_024913 AK289978 AL832619	130530	+	TSC_hg19_v1_chr7_+_120628867 AL832638	130661	+	BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AK000096|ING3|54556|inhibitor of growth family, member 3##NM_019071|ING3|54556|inhibitor of growth family, member 3##NM_198267|ING3|54556|inhibitor of growth family, member 3##AF161419|ING3|54556|inhibitor of growth family, member 3##BC009777|ING3|54556|inhibitor of growth family, member 3##BC093091|ING3|54556|inhibitor of growth family, member 3##AY007790|ING3|54556|inhibitor of growth family, member 3##AK291905|ING3|54556|inhibitor of growth family, member 3##AF074968|ING3|54556|inhibitor of growth family, member 3##BC073865|ING3|54556|inhibitor of growth family, member 3##AF180298|ING3|54556|inhibitor of growth family, member 3##BC062634|ING3|54556|inhibitor of growth family, member 3##BC093689|ING3|54556|inhibitor of growth family, member 3##BC101609|ING3|54556|inhibitor of growth family, member 3##BC143316|ING3|54556|inhibitor of growth family, member 3##BC009776|ING3|54556|inhibitor of growth family, member 3##BC010851|ING3|54556|inhibitor of growth family, member 3##BC146417|ING3|54556|inhibitor of growth family, member 3##BC153171|ING3|54556|inhibitor of growth family, member 3##NM_024913|C7orf58|79974|chromosome 7 open reading frame 58##AK289978|C7orf58|79974|chromosome 7 open reading frame 58##AL832619|C7orf58|79974|chromosome 7 open reading frame 58##AL832638|C7orf58|79974|chromosome 7 open reading frame 58	0.0	
chr7	87254092	87254195	reg1031244.p2	4.157	+	TSC_hg19_v1_chr7_-_87230197 AF016535 BC130424	-23864	-	M23234 NM_000443 NM_018849 NM_018850 BC042531	-149129	-	TSC_hg19_v1_chr7_+_86975006 NM_001143935 NM_001243745 NM_021151 AK127901 AK313487 BC051874 BC039004 BC012483 BC019226 AF073770 AF168793	-279149	+	TSC_hg19_v1_chr7_+_87257708 AK055233 NM_001134405 NM_001134406 NM_138290 BC022520 AK293607 AK294039	3674	+	AF345623 AF345624 AY425005 AY425006 M14758 AF345625 AK290159 NM_000927 AY425007 AY452673	88504	-	TSC_hg19_v1_chr7_-_87505468 AK290848	251322	-	AF016535|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##BC130424|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##M23234|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_000443|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018849|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_018850|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##BC042531|ABCB4|5244|ATP-binding cassette, sub-family B (MDR/TAP), member 4##NM_001143935|CROT|54677|carnitine O-octanoyltransferase##NM_001243745|CROT|54677|carnitine O-octanoyltransferase##NM_021151|CROT|54677|carnitine O-octanoyltransferase##AK127901|CROT|54677|carnitine O-octanoyltransferase##AK313487|CROT|54677|carnitine O-octanoyltransferase##BC051874|CROT|54677|carnitine O-octanoyltransferase##BC039004|CROT|54677|carnitine O-octanoyltransferase##BC012483|CROT|54677|carnitine O-octanoyltransferase##BC019226|CROT|54677|carnitine O-octanoyltransferase##AF073770|CROT|54677|carnitine O-octanoyltransferase##AF168793|CROT|54677|carnitine O-octanoyltransferase##AK055233|RUNDC3B|154661|RUN domain containing 3B##NM_001134405|RUNDC3B|154661|RUN domain containing 3B##NM_001134406|RUNDC3B|154661|RUN domain containing 3B##NM_138290|RUNDC3B|154661|RUN domain containing 3B##BC022520|RUNDC3B|154661|RUN domain containing 3B##AK293607|RUNDC3B|154661|RUN domain containing 3B##AK294039|RUNDC3B|154661|RUN domain containing 3B##AY425005|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AY425006|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##M14758|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AF345625|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK290159|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##NM_000927|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AY425007|ABCB1|5243|ATP-binding cassette, sub-family B (MDR/TAP), member 1##AK290848|SLC25A40|55972|solute carrier family 25, member 40	0.012118	
chrX	113318381	113318491	reg1035485.p2	4.157	+	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	-1234374	-	AB384557 AY987378 NM_001113490	-1252083	-	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	-1395097	-	NM_000868 U49516 BC028688 AK295753 TSC_hg19_v1_chrX_+_113818558 M81778	500136	+	X95302 AK308523 GQ494004 U70981 AK291957 NM_000640 Y08768 AK309444	933738	-	NM_001145346 AK301904	1105539	+	AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2##GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2##U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2##Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_001145346|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##AK301904|RBMXL3|139804|RNA binding motif protein, X-linked-like 3	0.966637	CTCF.p2:26:0.967
chr10	14344148	14344252	reg1032010.p1	4.156	+	TSC_hg19_v1_chr10_-_14050453 AK001072	-293708	-	TSC_hg19_v1_chr10_-_13749648 AK057828	-594511	-	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-715213	+	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	28650	-	TSC_hg19_v1_chr10_-_14646259 BC064407	302117	-	TSC_hg19_v1_chr10_-_14646423 BC072452	302229	-	AK001072|FRMD4A|55691|FERM domain containing 4A##AK057828|FRMD4A|55691|FERM domain containing 4A##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B	0.176614	
chr11	95701887	95702022	reg1034065.p2	4.156	+	BC052990 BC012086 TSC_hg19_v1_chr11_-_95657272 BC034474 BX647997 NM_001243571 NM_016156 NM_201278 NM_201281 AB028996	-44598	-	AK293243 TSC_hg19_v1_chr11_-_95657092 AK302940 BC040432 AK291277	-44903	-	D42054 BC039711 BC029385 AB385276 AY225092 CU691748 TSC_hg19_v1_chr11_+_95523869	-178114	+	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	374449	-	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	421088	-	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	421220	+	BC052990|MTMR2|8898|myotubularin related protein 2##BC012086|MTMR2|8898|myotubularin related protein 2##BC034474|MTMR2|8898|myotubularin related protein 2##BX647997|MTMR2|8898|myotubularin related protein 2##NM_001243571|MTMR2|8898|myotubularin related protein 2##NM_016156|MTMR2|8898|myotubularin related protein 2##NM_201278|MTMR2|8898|myotubularin related protein 2##NM_201281|MTMR2|8898|myotubularin related protein 2##AB028996|MTMR2|8898|myotubularin related protein 2##AK293243|MTMR2|8898|myotubularin related protein 2##AK302940|MTMR2|8898|myotubularin related protein 2##BC040432|MTMR2|8898|myotubularin related protein 2##AK291277|MTMR2|8898|myotubularin related protein 2##D42054|CEP57|9702|centrosomal protein 57kDa##BC039711|CEP57|9702|centrosomal protein 57kDa##BC029385|CEP57|9702|centrosomal protein 57kDa##AY225092|CEP57|9702|centrosomal protein 57kDa##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)	0.994182	CTCF.p2:-5:0.994
chr12	65284494	65284674	reg1001781.p1	4.156	+	AB527171 TSC_hg19_v1_chr12_+_65224283	-60336	+	TSC_hg19_v1_chr12_+_65218446 AK299508	-66140	+	NM_015279 TSC_hg19_v1_chr12_+_65218409 AK055404	-66201	+	DQ892394 DQ895609 TSC_hg19_v1_chr12_-_65514986	230406	-	BX647427 TSC_hg19_v1_chr12_-_65515016	230435	-	TSC_hg19_v1_chr12_-_65515107 AF122922 BC018037 AY358344	230501	-	AK299508|TBC1D30|23329|TBC1 domain family, member 30##NM_015279|TBC1D30|23329|TBC1 domain family, member 30##AK055404|TBC1D30|23329|TBC1 domain family, member 30##DQ892394|WIF1|11197|WNT inhibitory factor 1##DQ895609|WIF1|11197|WNT inhibitory factor 1##BX647427|WIF1|11197|WNT inhibitory factor 1##AF122922|WIF1|11197|WNT inhibitory factor 1##BC018037|WIF1|11197|WNT inhibitory factor 1##AY358344|WIF1|11197|WNT inhibitory factor 1	0.0	
chr12	94373004	94373088	reg1005237.p1	4.156	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-301863	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-407445	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-408226	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	169458	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	480485	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	480596	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.0	
chr20	49226909	49226994	reg1032412.p1	4.156	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	-99946	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-100019	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-100032	+	AK056792 NM_080829	26474	-	TSC_hg19_v1_chr20_-_49308074 AK124347	81126	-	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	121118	+	BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	0.114605	
chr22	22171294	22171367	reg1032068.p2	4.156	+	BC034486 BC074501 TSC_hg19_v1_chr22_-_22090057 BC048303 NM_013313 AB098734 AB098735	-81282	-	NM_014337 NM_148175 NM_148176 TSC_hg19_v1_chr22_+_22020298 AF320072 AK289545 BC000022 U37219 AK127259 BC028385 AK299206 CR456548 DQ891659 DQ894846 AB463162 CU013148 CU013436 CU673996 CU688484	-151001	+	TSC_hg19_v1_chr22_+_21996619 CR456570 AF277316 AB528230 BC139837 CU013169 CU013457	-174691	+	TSC_hg19_v1_chr22_-_22221936 DQ399292 AB384931 EU176323 EU831429 EU831522 AK307615 Z11694 AK090869 BC099905	50499	-	AK295188 TSC_hg19_v1_chr22_-_22221938	50607	-	TSC_hg19_v1_chr22_-_22221955 BC017832 NM_002745 NM_138957	50640	-	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)##BC074501|YPEL1|29799|yippee-like 1 (Drosophila)##BC048303|YPEL1|29799|yippee-like 1 (Drosophila)##NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)##AB098734|YPEL1|29799|yippee-like 1 (Drosophila)##AB098735|YPEL1|29799|yippee-like 1 (Drosophila)##NM_014337|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148175|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148176|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AF320072|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK289545|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC000022|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##U37219|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK127259|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC028385|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK299206|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456548|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ891659|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ894846|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013148|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013436|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456570|SDF2L1|23753|stromal cell-derived factor 2-like 1##AF277316|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC139837|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013169|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013457|SDF2L1|23753|stromal cell-derived factor 2-like 1##DQ399292|MAPK1|5594|mitogen-activated protein kinase 1##EU176323|MAPK1|5594|mitogen-activated protein kinase 1##EU831429|MAPK1|5594|mitogen-activated protein kinase 1##EU831522|MAPK1|5594|mitogen-activated protein kinase 1##AK307615|MAPK1|5594|mitogen-activated protein kinase 1##Z11694|MAPK1|5594|mitogen-activated protein kinase 1##AK090869|MAPK1|5594|mitogen-activated protein kinase 1##BC099905|MAPK1|5594|mitogen-activated protein kinase 1##AK295188|MAPK1|5594|mitogen-activated protein kinase 1##BC017832|MAPK1|5594|mitogen-activated protein kinase 1##NM_002745|MAPK1|5594|mitogen-activated protein kinase 1##NM_138957|MAPK1|5594|mitogen-activated protein kinase 1	0.0	
chr3	45595885	45596031	reg1036932.p2	4.156	+	AK308146 BC025989 TSC_hg19_v1_chr3_+_45430067 D21851 NM_015340	-165894	+	TSC_hg19_v1_chr3_-_45267804 NM_015444	-328133	-	AB078417 AF438313 TSC_hg19_v1_chr3_-_45267780 BC057390	-328250	-	TSC_hg19_v1_chr3_+_45635397 M80651	39627	+	TSC_hg19_v1_chr3_+_45636176 BC117236 BC117238 NM_014240 AJ132408 HQ258355	40313	+	CR749564 TSC_hg19_v1_chr3_+_45730767 NM_014016	134775	+	AK308146|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##BC025989|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##D21851|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015340|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##M80651|LIMD1|8994|LIM domains containing 1##BC117236|LIMD1|8994|LIM domains containing 1##BC117238|LIMD1|8994|LIM domains containing 1##NM_014240|LIMD1|8994|LIM domains containing 1##AJ132408|LIMD1|8994|LIM domains containing 1##HQ258355|LIMD1|8994|LIM domains containing 1##CR749564|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##NM_014016|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	0.0	
chr4	3374550	3374706	reg1015843.p1	4.156	+	AF030109 NM_198227	-2905	+	TSC_hg19_v1_chr4_+_3318244 BC106944	-56326	+	AF030111 NM_002926 NM_198229	-58755	+	BC112190 BC112192 TSC_hg19_v1_chr4_+_3443674	69039	+	TSC_hg19_v1_chr4_+_3443701 AK314099 D14012 NM_001528	69080	+	NM_001164673 NM_173660 AK091037 AX746744 BC141852 BC131544 AB220918	90439	+	AF030109|RGS12|6002|regulator of G-protein signaling 12##NM_198227|RGS12|6002|regulator of G-protein signaling 12##BC106944|RGS12|6002|regulator of G-protein signaling 12##AF030111|RGS12|6002|regulator of G-protein signaling 12##NM_002926|RGS12|6002|regulator of G-protein signaling 12##NM_198229|RGS12|6002|regulator of G-protein signaling 12##BC112190|HGFAC|3083|HGF activator##BC112192|HGFAC|3083|HGF activator##AK314099|HGFAC|3083|HGF activator##D14012|HGFAC|3083|HGF activator##NM_001528|HGFAC|3083|HGF activator##NM_001164673|DOK7|285489|docking protein 7##NM_173660|DOK7|285489|docking protein 7##AK091037|DOK7|285489|docking protein 7##BC141852|DOK7|285489|docking protein 7##BC131544|DOK7|285489|docking protein 7##AB220918|DOK7|285489|docking protein 7	0.0	
chr5	135065324	135065414	reg1034304.p2	4.156	+	NM_004887	-150401	-	AF086340 AF073957 AF144103 BT007080 AB528117 AM392840 AF106911 BC003513 AY358906 TSC_hg19_v1_chr5_-_134914682 AB543622 AK075514	-150796	-	BC008687 BC028226 NM_006161 TSC_hg19_v1_chr5_-_134871655 AB593107 AK314280	-193723	-	AK126812 NM_145282 BC025747	105020	+	CU688130 BC066283 BC066284 BC066285 BC066286 BC066287 M30134 NM_000590 S63356 X17543	166140	-	TSC_hg19_v1_chr5_+_135266044 NM_012159 BC044938	200671	+	NM_004887|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF086340|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF073957|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF144103|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BT007080|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AM392840|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AF106911|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BC003513|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AY358906|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AB543622|CXCL14|9547|chemokine (C-X-C motif) ligand 14##AK075514|CXCL14|9547|chemokine (C-X-C motif) ligand 14##BC008687|NEUROG1|4762|neurogenin 1##BC028226|NEUROG1|4762|neurogenin 1##NM_006161|NEUROG1|4762|neurogenin 1##AB593107|NEUROG1|4762|neurogenin 1##AK126812|SLC25A48|153328|solute carrier family 25, member 48##NM_145282|SLC25A48|153328|solute carrier family 25, member 48##BC025747|SLC25A48|153328|solute carrier family 25, member 48##BC066283|IL9|3578|interleukin 9##BC066284|IL9|3578|interleukin 9##BC066285|IL9|3578|interleukin 9##BC066286|IL9|3578|interleukin 9##BC066287|IL9|3578|interleukin 9##M30134|IL9|3578|interleukin 9##NM_000590|IL9|3578|interleukin 9##S63356|IL9|3578|interleukin 9##X17543|IL9|3578|interleukin 9##NM_012159|FBXL21|26223|F-box and leucine-rich repeat protein 21 (gene/pseudogene)##BC044938|FBXL21|26223|F-box and leucine-rich repeat protein 21 (gene/pseudogene)	0.85301	CTCF.p2:3:0.853
chr5	149341780	149341890	reg1029033.p2	4.156	+	TSC_hg19_v1_chr5_+_149340476 BC059390 AK290358	-1362	+	TSC_hg19_v1_chr5_+_149340352 AK312596	-1484	+	TSC_hg19_v1_chr5_+_149340320 NM_000112	-1527	+	BC033641 AL136539 AK092978 AX747835 NM_001243253 BC062669 AK056604	38333	-	NM_014983 TSC_hg19_v1_chr5_+_149380175	38356	+	TSC_hg19_v1_chr5_+_149380288 BC092520	38457	+	BC059390|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK290358|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##BC033641|TIGD6|81789|tigger transposable element derived 6##AL136539|TIGD6|81789|tigger transposable element derived 6##AK092978|TIGD6|81789|tigger transposable element derived 6##NM_001243253|TIGD6|81789|tigger transposable element derived 6##BC062669|LOC728287|728287|uncharacterized LOC728287##AK056604|TIGD6|81789|tigger transposable element derived 6##NM_014983|HMGXB3|22993|HMG box domain containing 3##BC092520|HMGXB3|22993|HMG box domain containing 3	0.072186	
chr5	93954203	93954303	reg1037893.p2	4.156	+	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	-506933	-	CU688688 EU446850 BC029532 AB527965 AK098546 NM_153216	-877001	-	AK309742 TSC_hg19_v1_chr5_-_92957232	-997042	-	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	4	-	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	120	+	AK025997 TSC_hg19_v1_chr5_-_94224607	270353	-	AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##EU446850|POU5F2|134187|POU domain class 5, transcription factor 2##BC029532|POU5F2|134187|POU domain class 5, transcription factor 2##AK098546|POU5F2|134187|POU domain class 5, transcription factor 2##NM_153216|POU5F2|134187|POU domain class 5, transcription factor 2##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1	0.0	
chr6	56632851	56632953	reg1026888.p1	4.156	+	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	-125263	-	BC038763 TSC_hg19_v1_chr6_-_56407722	-225194	-	AF330693 TSC_hg19_v1_chr6_-_56258945	-373978	-	TSC_hg19_v1_chr6_-_56708446 U31850	75570	-	AK294830 TSC_hg19_v1_chr6_-_56716493	83550	-	AK299898 TSC_hg19_v1_chr6_-_56716715	83812	-	AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin##AF330693|COL21A1|81578|collagen, type XXI, alpha 1##U31850|DST|667|dystonin##AK294830|DST|667|dystonin##AK299898|DST|667|dystonin	0.344803	CTCF.p2:-12:0.345
chr8	129351183	129351253	reg1035306.p2	4.156	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-544435	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-602728	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-602893	+	AB042405 NM_031415	1447915	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1600697	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1600788	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chrX	118826260	118826369	reg1032867.p2	4.156	+	BC047878 BC068514 BC040379 AY208891 NM_001173487 NM_017544	-86486	-	EF165090 EF165091 EF165093 AJ011812 EF158333 EF216688 EF216689 NM_001173488	-99332	-	BC042021 NM_181777	-112017	+	D50918 AB384441 CU679289 CU680116 CU690318 TSC_hg19_v1_chrX_-_118827108 BC069231	771	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	818	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	865	-	BC047878|NKRF|55922|NFKB repressing factor##BC068514|NKRF|55922|NFKB repressing factor##BC040379|NKRF|55922|NFKB repressing factor##AY208891|NKRF|55922|NFKB repressing factor##NM_001173487|NKRF|55922|NFKB repressing factor##NM_017544|NKRF|55922|NFKB repressing factor##EF165090|NKRF|55922|NFKB repressing factor##EF165091|NKRF|55922|NFKB repressing factor##EF165093|NKRF|55922|NFKB repressing factor##AJ011812|NKRF|55922|NFKB repressing factor##EF158333|NKRF|55922|NFKB repressing factor##EF216688|NKRF|55922|NFKB repressing factor##EF216689|NKRF|55922|NFKB repressing factor##NM_001173488|NKRF|55922|NFKB repressing factor##BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D50918|SEPT6|23157|septin 6##BC069231|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6	0.377974	CTCF.p2:-41:0.378
chr10	80956621	80956692	reg1004934.p1	4.155	+	TSC_hg19_v1_chr10_+_80899458 AK025812	-57172	+	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	-127868	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-1163025	+	TSC_hg19_v1_chr10_+_81003207 AB033050	46474	+	AK299728 TSC_hg19_v1_chr10_+_81065901	109232	+	TSC_hg19_v1_chr10_+_81070578 BC025342 BC068072	113988	+	AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK299728|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC025342|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC068072|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.0	
chr1	151762776	151762934	reg1031087.p1	4.155	+	AF175296 NM_016178 BC128558 BC128559 AY713300	-23695	+	AK026363 AK309841 TSC_hg19_v1_chr1_-_151735973 NM_031420	-26850	-	TSC_hg19_v1_chr1_-_151735968 AK293401	-26889	-	AK295948 AK303063 BC032690 TSC_hg19_v1_chr1_-_151762965 AK226092 BC022467 AK316279 AK056402 AK225160 AF119121 AF227192 NM_001083963 NM_001083964 NM_001083965 NM_006862	115	-	TSC_hg19_v1_chr1_+_151763331 BC038201	409	+	BC137220 BC137221 AY358115 NM_001004432	14956	-	AF175296|OAZ3|51686|ornithine decarboxylase antizyme 3##NM_016178|OAZ3|51686|ornithine decarboxylase antizyme 3##BC128558|OAZ3|51686|ornithine decarboxylase antizyme 3##BC128559|OAZ3|51686|ornithine decarboxylase antizyme 3##AY713300|OAZ3|51686|ornithine decarboxylase antizyme 3##AK026363|MRPL9|65005|mitochondrial ribosomal protein L9##AK309841|MRPL9|65005|mitochondrial ribosomal protein L9##NM_031420|MRPL9|65005|mitochondrial ribosomal protein L9##AK293401|MRPL9|65005|mitochondrial ribosomal protein L9##AK295948|TDRKH|11022|tudor and KH domain containing##AK303063|TDRKH|11022|tudor and KH domain containing##BC032690|TDRKH|11022|tudor and KH domain containing##AK226092|TDRKH|11022|tudor and KH domain containing##BC022467|TDRKH|11022|tudor and KH domain containing##AK316279|TDRKH|11022|tudor and KH domain containing##AK056402|TDRKH|11022|tudor and KH domain containing##AK225160|TDRKH|11022|tudor and KH domain containing##AF119121|TDRKH|11022|tudor and KH domain containing##AF227192|TDRKH|11022|tudor and KH domain containing##NM_001083963|TDRKH|11022|tudor and KH domain containing##NM_001083964|TDRKH|11022|tudor and KH domain containing##NM_001083965|TDRKH|11022|tudor and KH domain containing##NM_006862|TDRKH|11022|tudor and KH domain containing##BC137220|LINGO4|339398|leucine rich repeat and Ig domain containing 4##BC137221|LINGO4|339398|leucine rich repeat and Ig domain containing 4##AY358115|LINGO4|339398|leucine rich repeat and Ig domain containing 4##NM_001004432|LINGO4|339398|leucine rich repeat and Ig domain containing 4	0.059935	
chr1	28503113	28503235	reg1027476.p3	4.155	+	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-88050	-	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-216656	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-241613	+	NM_000952 NM_001164723	280	-	S52624 AK292053 NM_001164721 NM_001164722	17238	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	56357	-	BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8	0.770414	CTCF.p2:-91:0.770
chr16	48100158	48100278	reg1034539.p1	4.155	+	TSC_hg19_v1_chr16_+_47495241 X84908 CR936710 BC033657 AK309226	-604979	+	TSC_hg19_v1_chr16_+_47495206 NM_000293 NM_001031835 AK298588	-605030	+	TSC_hg19_v1_chr16_-_47495158 AF212247 AK301908	-605061	-	AY196326 AY040220 NM_033226	80402	-	AY040219 NM_033151	165963	-	AF367202 AF411579 NM_032583 NM_145186	168869	-	X84908|PHKB|5257|phosphorylase kinase, beta##CR936710|PHKB|5257|phosphorylase kinase, beta##BC033657|PHKB|5257|phosphorylase kinase, beta##AK309226|PHKB|5257|phosphorylase kinase, beta##NM_000293|PHKB|5257|phosphorylase kinase, beta##NM_001031835|PHKB|5257|phosphorylase kinase, beta##AF212247|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK301908|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AY196326|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040220|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##NM_033226|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040219|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_033151|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF367202|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF411579|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_032583|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_145186|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11	0.103424	
chr16	53096008	53096094	reg1021518.p2	4.155	+	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	-7170	+	AK299202 NM_001146188	-514338	-	NM_001080430	-515246	-	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	37048	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	69009	+	NM_001207030	308989	-	AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_001207030|LOC643802|643802|u3 small nucleolar ribonucleoprotein protein MPP10-like	0.0	
chr18	64284070	64284166	reg1035618.p1	4.155	+	AJ007607 NM_021153 AK304000 AK315257 BC015877	-12807	-	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-865916	+	TSC_hg19_v1_chr18_+_63417845 BC036786	-866252	+	AK021849 TSC_hg19_v1_chr18_-_65182656	898465	-	TSC_hg19_v1_chr18_-_65183956 NM_032160	899828	-	AM393206 AM393295 CU689334 TSC_hg19_v1_chr18_-_66382307 AK307269 AK295551 BC032325 AL832341 AL832356 BC093792 BC093794 BC143400 AB058733	2098148	-	AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AK021849|DSEL|92126|dermatan sulfate epimerase-like##NM_032160|DSEL|92126|dermatan sulfate epimerase-like##AM393206|TMX3|54495|thioredoxin-related transmembrane protein 3##AM393295|TMX3|54495|thioredoxin-related transmembrane protein 3##AK307269|TMX3|54495|thioredoxin-related transmembrane protein 3##AK295551|TMX3|54495|thioredoxin-related transmembrane protein 3##BC032325|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832341|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832356|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093792|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093794|TMX3|54495|thioredoxin-related transmembrane protein 3##BC143400|TMX3|54495|thioredoxin-related transmembrane protein 3##AB058733|TMX3|54495|thioredoxin-related transmembrane protein 3	0.964227	CTCF.p2:15:0.964
chr2	177796599	177796727	reg1029763.p1	4.155	+	BC013438 TSC_hg19_v1_chr2_-_177502718	-293975	-	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-662424	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-743247	+	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	280811	+	AK311688 NM_001145412 NM_001145413	331908	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	332713	-	BC013438|LOC375295|375295|uncharacterized LOC375295##NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.03288	
chr22	39363989	39364086	reg1033717.p1	4.155	+	NM_001193289 NM_145699 U03891 BC126416 BC144146 CR456393 AB528063 CU012950 CU013238 HQ258100	-10427	+	TSC_hg19_v1_chr22_-_39268255 AK094829 NM_014292	-95733	-	TSC_hg19_v1_chr22_-_39268222 BC012111 AK293035	-95816	-	AK024854 NM_004900 U61084 CT841510 AB527109 AB528064 AB528855 CU012951 CU012954 CU013239 CU013242 CU691044 AY743217 EU527884	14394	+	TSC_hg19_v1_chr22_+_39410261 AK313272 AF165520 BC011739 NM_014508 BC021080	46214	+	CR456394 TSC_hg19_v1_chr22_+_39410295 AB208979 AB590057 CU012952 CU013240	46289	+	NM_001193289|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##NM_145699|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##U03891|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC126416|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC144146|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CR456393|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU012950|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU013238|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##HQ258100|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##AK094829|CBX6|23466|chromobox homolog 6##NM_014292|CBX6|23466|chromobox homolog 6##BC012111|CBX6|23466|chromobox homolog 6##AK293035|CBX6|23466|chromobox homolog 6##AK024854|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##NM_004900|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##U61084|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CT841510|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012951|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012954|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##CU013239|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU013242|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AY743217|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##EU527884|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AK313272|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AF165520|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC011739|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##NM_014508|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC021080|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CR456394|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AB208979|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU012952|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##CU013240|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	0.0	
chr17	57864029	57864209	reg1021903.p2	4.154	+	TSC_hg19_v1_chr17_+_57785080 AK293664	-79046	+	AK294854 TSC_hg19_v1_chr17_+_57785025 AF214006 AX775965	-79084	+	BC009758 TSC_hg19_v1_chr17_+_57785014 AK024969	-79103	+	TSC_hg19_v1_chr17_+_57915291 AK310806	51187	+	AK024096 AK298492 AK301312 BC000258 AK022771 AK315172 NM_001193609 NM_001193610 NM_001193611 NM_001193612 NM_001193613 NM_016261	106072	-	NM_003161 BC036033 TSC_hg19_v1_chr17_+_57970481 AK293247	106343	+	AK293664|VMP1|81671|vacuole membrane protein 1##AK294854|VMP1|81671|vacuole membrane protein 1##AF214006|VMP1|81671|vacuole membrane protein 1##AX775965|VMP1|81671|vacuole membrane protein 1##BC009758|VMP1|81671|vacuole membrane protein 1##AK024969|VMP1|81671|vacuole membrane protein 1##AK024096|TUBD1|51174|tubulin, delta 1##AK298492|TUBD1|51174|tubulin, delta 1##AK301312|TUBD1|51174|tubulin, delta 1##BC000258|TUBD1|51174|tubulin, delta 1##AK022771|TUBD1|51174|tubulin, delta 1##AK315172|TUBD1|51174|tubulin, delta 1##NM_001193609|TUBD1|51174|tubulin, delta 1##NM_001193610|TUBD1|51174|tubulin, delta 1##NM_001193611|TUBD1|51174|tubulin, delta 1##NM_001193612|TUBD1|51174|tubulin, delta 1##NM_001193613|TUBD1|51174|tubulin, delta 1##NM_016261|TUBD1|51174|tubulin, delta 1##NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	0.0	
chr3	158362169	158362267	reg1029598.p1	4.154	+	NM_001130156 NM_001130157 NM_001195432 NM_001195433 NM_001195434 NM_022443 AK056948 AK315402 BC095437 BX647666 AY848700 AY848701 AY848702 BC007045 L49054 AK297488 AK096889	-73221	+	TSC_hg19_v1_chr3_+_157827937 AK300388	-534278	+	TSC_hg19_v1_chr3_+_157827910 AK290334 BC006982 NM_016625 AF208853 BC010357	-534327	+	TSC_hg19_v1_chr3_+_158362361 AF309777 AF367998 AK000780 NM_024996 BC049210	111	+	TSC_hg19_v1_chr3_+_158362373 AK315031	163	+	TSC_hg19_v1_chr3_+_158362392 CU690604	198	+	NM_001130156|MLF1|4291|myeloid leukemia factor 1##NM_001130157|MLF1|4291|myeloid leukemia factor 1##NM_001195432|MLF1|4291|myeloid leukemia factor 1##NM_001195433|MLF1|4291|myeloid leukemia factor 1##NM_001195434|MLF1|4291|myeloid leukemia factor 1##NM_022443|MLF1|4291|myeloid leukemia factor 1##AK056948|MLF1|4291|myeloid leukemia factor 1##AK315402|MLF1|4291|myeloid leukemia factor 1##BC095437|MLF1|4291|myeloid leukemia factor 1##BX647666|MLF1|4291|myeloid leukemia factor 1##AY848700|MLF1|4291|myeloid leukemia factor 1##AY848701|MLF1|4291|myeloid leukemia factor 1##AY848702|MLF1|4291|myeloid leukemia factor 1##BC007045|MLF1|4291|myeloid leukemia factor 1##L49054|MLF1|4291|myeloid leukemia factor 1##AK297488|MLF1|4291|myeloid leukemia factor 1##AK096889|MLF1|4291|myeloid leukemia factor 1##AK300388|RSRC1|51319|arginine/serine-rich coiled-coil 1##AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1##NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1##AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1##AF309777|GFM1|85476|G elongation factor, mitochondrial 1##AF367998|GFM1|85476|G elongation factor, mitochondrial 1##AK000780|GFM1|85476|G elongation factor, mitochondrial 1##NM_024996|GFM1|85476|G elongation factor, mitochondrial 1##BC049210|GFM1|85476|G elongation factor, mitochondrial 1##AK315031|GFM1|85476|G elongation factor, mitochondrial 1	0.0	
chr3	39208026	39208142	reg1030198.p2	4.154	+	NM_033027 TSC_hg19_v1_chr3_-_39195146	-12960	-	TSC_hg19_v1_chr3_-_39195053 BC038949 AB053121 BC028213	-13033	-	NM_001105513 NM_145755 AJ487015 BC062621 BC129948 AK022483 BC039691 AK302408 AK302465 CU687576	-58845	+	BC127119 BC139782 AY375160 NM_194293 TSC_hg19_v1_chr3_-_39234085 AJ626899 AJ626900 NM_001198621 AK096421 BX648565 CR749430	26001	-	U28934 BC028078 U20350 AK307911 AK312373 AK225764 BC017855 NM_001337	113418	-	NM_001171172	113845	-	NM_033027|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC038949|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##AB053121|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC028213|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##NM_001105513|TTC21A|199223|tetratricopeptide repeat domain 21A##NM_145755|TTC21A|199223|tetratricopeptide repeat domain 21A##AJ487015|TTC21A|199223|tetratricopeptide repeat domain 21A##BC062621|TTC21A|199223|tetratricopeptide repeat domain 21A##BC129948|TTC21A|199223|tetratricopeptide repeat domain 21A##AK022483|TTC21A|199223|tetratricopeptide repeat domain 21A##BC039691|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302408|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302465|TTC21A|199223|tetratricopeptide repeat domain 21A##BC127119|XIRP1|165904|xin actin-binding repeat containing 1##BC139782|XIRP1|165904|xin actin-binding repeat containing 1##AY375160|XIRP1|165904|xin actin-binding repeat containing 1##NM_194293|XIRP1|165904|xin actin-binding repeat containing 1##AJ626899|XIRP1|165904|xin actin-binding repeat containing 1##AJ626900|XIRP1|165904|xin actin-binding repeat containing 1##NM_001198621|XIRP1|165904|xin actin-binding repeat containing 1##AK096421|XIRP1|165904|xin actin-binding repeat containing 1##BX648565|XIRP1|165904|xin actin-binding repeat containing 1##CR749430|XIRP1|165904|xin actin-binding repeat containing 1##U28934|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC028078|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##U20350|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK307911|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK312373|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK225764|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC017855|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001337|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171172|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1	0.0	
chr5	124287404	124287584	reg1036267.p1	4.154	+	BC131507 AB033107 BC151226 NM_020747	-206706	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1439612	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1528350	-	NM_001146319 AK316288 AK300154	1408320	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1471349	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	1471693	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.0	
chr6	112658485	112658622	reg1031354.p1	4.154	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-82658	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-82748	-	S78569 TSC_hg19_v1_chr6_-_112575748 BC004241 AK304401 BC026237	-82824	-	AK122906 NM_001013734	9978	+	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	1520181	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	1633719	-	BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##S78569|LAMA4|3910|laminin, alpha 4##BC004241|LAMA4|3910|laminin, alpha 4##AK304401|LAMA4|3910|laminin, alpha 4##BC026237|LAMA4|3910|laminin, alpha 4##AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2	0.696437	CTCF.p2:4:0.696
chr8	33796823	33796924	reg1033795.p1	4.154	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-339378	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	-339414	-	TSC_hg19_v1_chr8_-_33457295 BC067804	-339586	-	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	1296114	+	NM_001031836 AK302391 BC028701	2844997	+	TSC_hg19_v1_chr8_-_37457377 AK025743	3660495	-	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC067804|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AK025743|LOC157860|157860|uncharacterized LOC157860	0.0	
chr10	134352105	134352217	reg1030143.p2	4.153	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	-849	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-93478	+	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	-141452	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	247345	-	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	403877	-	NM_001083909 TSC_hg19_v1_chr10_+_134901429 AK124728	549296	+	BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40##NM_001083909|GPR123|84435|G protein-coupled receptor 123##AK124728|GPR123|84435|G protein-coupled receptor 123	0.0	
chr1	4716470	4716611	reg1034688.p1	4.153	+	AY282806 NM_001042478 NM_018836	-1436	+	TSC_hg19_v1_chr1_+_4714668 AF175409	-1811	+	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	-899695	-	NM_001199861	1335817	+	TSC_hg19_v1_chr1_-_6052456 AY118228	1335905	-	TSC_hg19_v1_chr1_-_6052507 AK124074 AK314326 AF537130 BC040520 NM_015102	1335969	-	AY282806|AJAP1|55966|adherens junctions associated protein 1##NM_001042478|AJAP1|55966|adherens junctions associated protein 1##NM_018836|AJAP1|55966|adherens junctions associated protein 1##AF175409|AJAP1|55966|adherens junctions associated protein 1##BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##NM_001199861|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AY118228|NPHP4|261734|nephronophthisis 4##AK124074|NPHP4|261734|nephronophthisis 4##AK314326|NPHP4|261734|nephronophthisis 4##AF537130|NPHP4|261734|nephronophthisis 4##BC040520|NPHP4|261734|nephronophthisis 4##NM_015102|NPHP4|261734|nephronophthisis 4	0.0	
chr19	33181071	33181172	reg1034296.p1	4.153	+	AK124499 NM_207391	-14809	+	BC050529 TSC_hg19_v1_chr19_-_33166076 AF447882 AL136784 AK054561 BC045605 NM_032139	-15034	-	TSC_hg19_v1_chr19_+_33072095 NM_004708 AK293486 AB209040 BC015519 AF014955 DQ208400 AB590247 DQ893577 DQ894611 BT006694 CR456934	-108994	+	TSC_hg19_v1_chr19_+_33182761 NM_001105570	1656	+	NM_001110822 BC049000	29558	+	BC029802 AF141289 AB033548 AK026446 AK223147 AK313708 BC017962 NM_001126335 NM_001243036 NM_014270	179540	-	AK124499|RGS9BP|388531|regulator of G protein signaling 9 binding protein##NM_207391|RGS9BP|388531|regulator of G protein signaling 9 binding protein##BC050529|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##AF447882|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##AL136784|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##AK054561|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##BC045605|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##NM_032139|ANKRD27|84079|ankyrin repeat domain 27 (VPS9 domain)##NM_004708|PDCD5|9141|programmed cell death 5##AK293486|PDCD5|9141|programmed cell death 5##AB209040|PDCD5|9141|programmed cell death 5##BC015519|PDCD5|9141|programmed cell death 5##AF014955|PDCD5|9141|programmed cell death 5##DQ208400|PDCD5|9141|programmed cell death 5##DQ893577|PDCD5|9141|programmed cell death 5##DQ894611|PDCD5|9141|programmed cell death 5##BT006694|PDCD5|9141|programmed cell death 5##CR456934|PDCD5|9141|programmed cell death 5##NM_001105570|NUDT19|390916|nudix (nucleoside diphosphate linked moiety X)-type motif 19##NM_001110822|TDRD12|91646|tudor domain containing 12##BC049000|TDRD12|91646|tudor domain containing 12##BC029802|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AF141289|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AB033548|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AK026446|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AK223147|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AK313708|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##BC017962|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##NM_001126335|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##NM_001243036|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##NM_014270|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9	0.0	
chr21	26933987	26934161	reg1032444.p1	4.153	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-1133006	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-4563301	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-4563384	+	TSC_hg19_v1_chr21_+_26934442 AF402776	398	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	45741	-	NM_021219 TSC_hg19_v1_chr21_+_27011719	77579	+	AK124194|FLJ42200|400860|FLJ42200 protein##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##NM_021219|JAM2|58494|junctional adhesion molecule 2	0.018626	
chr4	100984648	100984775	reg1031230.p1	4.153	+	TSC_hg19_v1_chr4_+_100871641 AK123926	-113065	+	TSC_hg19_v1_chr4_-_100871513 AK056803 NM_002106 BC103743	-113197	-	AY597416 BC018002 BC020936 D28450 TSC_hg19_v1_chr4_-_100871433	-113255	-	AL832277 BC013592 TSC_hg19_v1_chr4_-_101111626 AK312926 AK094236 NM_145244	126919	-	CU676062 AB590686 AB034695 AK222741 AK304568 AK291831 BC017781 AF205940 AK026875 AK313504 NM_001159694 NM_016242	454449	-	AB385587 AB451338 AB451487 AM393486 AM393713 CU693026 AY904364 BC025714 TSC_hg19_v1_chr4_-_102268080 L14778	1283315	-	AK123926|LOC256880|256880|uncharacterized LOC256880##AK056803|H2AFZ|3015|H2A histone family, member Z##NM_002106|H2AFZ|3015|H2A histone family, member Z##BC103743|H2AFZ|3015|H2A histone family, member Z##AY597416|H2AFZ|3015|H2A histone family, member Z##BC018002|H2AFZ|3015|H2A histone family, member Z##BC020936|H2AFZ|3015|H2A histone family, member Z##D28450|H2AFZ|3015|H2A histone family, member Z##AL832277|DDIT4L|115265|DNA-damage-inducible transcript 4-like##BC013592|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK312926|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK094236|DDIT4L|115265|DNA-damage-inducible transcript 4-like##NM_145244|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AB034695|EMCN|51705|endomucin##AK222741|EMCN|51705|endomucin##AK304568|EMCN|51705|endomucin##AK291831|EMCN|51705|endomucin##BC017781|EMCN|51705|endomucin##AF205940|EMCN|51705|endomucin##AK026875|EMCN|51705|endomucin##AK313504|EMCN|51705|endomucin##NM_001159694|EMCN|51705|endomucin##NM_016242|EMCN|51705|endomucin##AB451338|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AB451487|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393486|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393713|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AY904364|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##BC025714|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##L14778|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	0.985978	CTCF.p2:-16:0.986
chr6	112063017	112063198	reg1032036.p2	4.153	+	AB451293 AB451426 AB528738 CU689398 S74774 NM_153047	-21849	-	NM_001164281 NM_147686	-135634	-	TSC_hg19_v1_chr6_-_111927082 AL050289 AK310141 AF136406 AF136407	-135935	-	BC032496 NM_153048	17201	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	131428	-	TSC_hg19_v1_chr6_-_112194648 NM_002037	131548	-	AB451293|FYN|2534|FYN oncogene related to SRC, FGR, YES##AB451426|FYN|2534|FYN oncogene related to SRC, FGR, YES##S74774|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153047|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_001164281|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_147686|TRAF3IP2|10758|TRAF3 interacting protein 2##AL050289|TRAF3IP2|10758|TRAF3 interacting protein 2##AK310141|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136406|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136407|TRAF3IP2|10758|TRAF3 interacting protein 2##BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_002037|FYN|2534|FYN oncogene related to SRC, FGR, YES	0.0	
chr7	18255202	18255315	reg1032977.p1	4.153	+	TSC_hg19_v1_chr7_+_18126583 AK304298 NM_001204144	-128667	+	BC062797 BC005309 M57423 NM_175886	-187793	-	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	-275131	-	AK097178 TSC_hg19_v1_chr7_+_18330071	74801	+	TSC_hg19_v1_chr7_+_18535361 BC092441 BC150328 AB018287 AJ459808 BC152405 NM_001204145 NM_001204146 NM_014707 NM_178423 AK297404 AK316109 AY429540	280141	+	CR749550 EU832154 EU832248 TSC_hg19_v1_chr7_+_18535882 NM_058176 NM_178425 AB385379 AY032737 AY032738 AY197371 EU832247 BC111735	280613	+	AK304298|HDAC9|9734|histone deacetylase 9##NM_001204144|HDAC9|9734|histone deacetylase 9##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13##AK097178|HDAC9|9734|histone deacetylase 9##BC150328|HDAC9|9734|histone deacetylase 9##AB018287|HDAC9|9734|histone deacetylase 9##AJ459808|HDAC9|9734|histone deacetylase 9##BC152405|HDAC9|9734|histone deacetylase 9##NM_001204145|HDAC9|9734|histone deacetylase 9##NM_001204146|HDAC9|9734|histone deacetylase 9##NM_014707|HDAC9|9734|histone deacetylase 9##NM_178423|HDAC9|9734|histone deacetylase 9##AK297404|HDAC9|9734|histone deacetylase 9##AK316109|HDAC9|9734|histone deacetylase 9##AY429540|HDAC9|9734|histone deacetylase 9##CR749550|HDAC9|9734|histone deacetylase 9##EU832154|HDAC9|9734|histone deacetylase 9##EU832248|HDAC9|9734|histone deacetylase 9##NM_058176|HDAC9|9734|histone deacetylase 9##NM_178425|HDAC9|9734|histone deacetylase 9##AY032737|HDAC9|9734|histone deacetylase 9##AY032738|HDAC9|9734|histone deacetylase 9##AY197371|HDAC9|9734|histone deacetylase 9##EU832247|HDAC9|9734|histone deacetylase 9##BC111735|HDAC9|9734|histone deacetylase 9	0.731686	CTCF.p2:2:0.732
chr9	116102607	116102717	reg1034946.p2	4.153	+	AK074891 AL833635 BC022982 AK093240 AX748007 BC012352 TSC_hg19_v1_chr9_-_116102556 AK313843 NM_001012361 NM_145241	-86	-	BC013036 NM_145051	-41343	-	TSC_hg19_v1_chr9_+_116037955 BC007424 AF016369 AB209797 AK313131 BC001588 EU176331 EU176673 AB590453 AY572489 CR457105	-64673	+	NM_017688 AK092607 AJ276691 AB527588	9171	+	BC031878 NM_031219	35678	-	TSC_hg19_v1_chr9_-_116139236 AK315401	36584	-	AK074891|WDR31|114987|WD repeat domain 31##AL833635|WDR31|114987|WD repeat domain 31##BC022982|WDR31|114987|WD repeat domain 31##AK093240|WDR31|114987|WD repeat domain 31##BC012352|WDR31|114987|WD repeat domain 31##AK313843|WDR31|114987|WD repeat domain 31##NM_001012361|WDR31|114987|WD repeat domain 31##NM_145241|WDR31|114987|WD repeat domain 31##BC013036|RNF183|138065|ring finger protein 183##NM_145051|RNF183|138065|ring finger protein 183##BC007424|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##AF016369|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##AB209797|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##AK313131|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##BC001588|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##EU176331|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##EU176673|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##AY572489|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##CR457105|PRPF4|9128|PRP4 pre-mRNA processing factor 4 homolog (yeast)##NM_017688|BSPRY|54836|B-box and SPRY domain containing##AK092607|BSPRY|54836|B-box and SPRY domain containing##AJ276691|BSPRY|54836|B-box and SPRY domain containing##BC031878|HDHD3|81932|haloacid dehalogenase-like hydrolase domain containing 3##NM_031219|HDHD3|81932|haloacid dehalogenase-like hydrolase domain containing 3##AK315401|HDHD3|81932|haloacid dehalogenase-like hydrolase domain containing 3	0.0	
chr9	117776609	117776789	reg1000468.p2	4.153	+	AK313619 NM_001244 NM_001252290	-83825	-	AB590753 AK291642 BC074940 BC074941 BC069435 AK313721 BC104462 BC104463 NM_005118 AF520785	-208348	-	AY434464 NM_001204344	-221890	-	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	103774	-	AB022761 NM_017418	127397	+	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	1139371	+	AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##AK291642|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074940|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC074941|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC069435|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AK313721|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104462|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##BC104463|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_005118|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AF520785|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AY434464|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##NM_001204344|TNFSF15|9966|tumor necrosis factor (ligand) superfamily, member 15##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1	0.0	
chr9	131406129	131406309	reg1030528.p2	4.153	+	TSC_hg19_v1_chr9_+_131388703 AK309836 AK310696	-17476	+	X86901 TSC_hg19_v1_chr9_+_131388179	-18041	+	TSC_hg19_v1_chr9_+_131314868 NM_001130438 NM_001195532 NM_003127 AK294753 AK300386 AK307676 BC034956 AB191262 AB209860 BC051801 J05243 BC053521 U83867	-91429	+	TSC_hg19_v1_chr9_-_131418938 BC001614	12744	-	TSC_hg19_v1_chr9_-_131419024 BC011874 NM_052844	12847	-	NM_001122821 TSC_hg19_v1_chr9_+_131446071 AK300794	39785	+	AK309836|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AK310696|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##X86901|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##NM_001130438|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##NM_001195532|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##NM_003127|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AK294753|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AK300386|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AK307676|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##BC034956|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AB191262|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##AB209860|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##BC051801|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##J05243|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##BC053521|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##U83867|SPTAN1|6709|spectrin, alpha, non-erythrocytic 1 (alpha-fodrin)##BC001614|WDR34|89891|WD repeat domain 34##BC011874|WDR34|89891|WD repeat domain 34##NM_052844|WDR34|89891|WD repeat domain 34##NM_001122821|SET|6418|SET nuclear oncogene##AK300794|SET|6418|SET nuclear oncogene	0.0	
chrX	128790015	128790113	reg1031884.p1	4.153	+	BC021104 NM_017413	-1142	-	TSC_hg19_v1_chrX_+_128674247 AK226116 BC094726 NM_000276 NM_001587 U57627 AK293107 BC130612 BC144106 BC025253 AB384825	-115766	+	TSC_hg19_v1_chrX_-_128657468 NM_003069 NM_139035	-132602	-	AK300954 U90724 NM_003399 BC126174 BC143901	82912	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	123823	+	TSC_hg19_v1_chrX_+_128913898 AK314869 AK292023 BC051881 AL049683 AB528892	123920	+	BC021104|APLN|8862|apelin##NM_017413|APLN|8862|apelin##AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe##U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe##AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_003069|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_139035|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3##AK314869|SASH3|54440|SAM and SH3 domain containing 3##AK292023|SASH3|54440|SAM and SH3 domain containing 3##BC051881|SASH3|54440|SAM and SH3 domain containing 3##AL049683|SASH3|54440|SAM and SH3 domain containing 3	0.0	
chr12	31902044	31902116	reg1020581.p1	4.152	+	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	-20024	-	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	-20106	-	NM_001135863 TSC_hg19_v1_chr12_+_31812621 AL832339 BC039107	-89466	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	43124	-	TSC_hg19_v1_chr12_+_32112348 NM_018169	210251	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	210314	+	BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001135863|METTL20|254013|methyltransferase like 20##AL832339|METTL20|254013|methyltransferase like 20##BC039107|METTL20|254013|methyltransferase like 20##BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35	0.0	
chr12	861813	861886	reg1003069.p4	4.152	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-89134	-	TSC_hg19_v1_chr12_-_752800 AK298043	-109030	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-109671	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	307	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	907	+	BC013629 TSC_hg19_v1_chr12_+_1017145	155233	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr14	22694319	22694430	reg1034788.p2	4.152	+	AB463964 NM_001001912 AY726598	-561052	+	NM_001005466 AB529274 BC137371 BC137382	-591328	-	AB528817 NM_001005465	-655500	-	X58763 TSC_hg19_v1_chr14_+_22989364	294975	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	363712	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	363760	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.602168	CTCF.p2:-2:0.602
chr22	44389345	44389475	reg1001626.p2	4.152	+	TSC_hg19_v1_chr22_+_44351384 AY189688 AF151809 BC007830 AK222657 BC015200 AK297770 AK312773 CR456483 CU013033 CU013321 AB463278 DQ893124 DQ896401 CU677235	-38016	+	TSC_hg19_v1_chr22_+_44351321 AK001087	-38088	+	NM_015380 TSC_hg19_v1_chr22_+_44351285 BC011681	-38130	+	AF303887 NM_001003828	5680	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	30789	+	AK308443 NM_001243386	32773	+	AY189688|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AF151809|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC007830|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK222657|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC015200|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK297770|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK312773|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CR456483|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013033|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013321|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ893124|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ896401|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK001087|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##NM_015380|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC011681|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AF303887|PARVB|29780|parvin, beta##NM_001003828|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta	0.0	
chr3	62172763	62172867	reg1036716.p1	4.152	+	AB055764 TSC_hg19_v1_chr3_-_61728812	-444004	-	L09247 AB385117 TSC_hg19_v1_chr3_+_61548071	-624839	+	BC047734 TSC_hg19_v1_chr3_+_61547294	-625529	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	131891	+	BC017772 NM_020685	132580	+	AK290464 NM_018008	186374	-	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2	0.559922	CTCF.p2:6:0.560
chr9	136351418	136351493	reg1001589.p1	4.152	+	DQ891513 DQ894704 AK294974 BC013740 TSC_hg19_v1_chr9_-_136344222 AJ011372 AK225106 AK222919 AK074836 AK096630 Y17803 AK074927 NM_001145099 NM_017585	-7227	-	NM_001135775 NM_001242369 NM_001242370 NM_017586 AK075416 TSC_hg19_v1_chr9_+_136325120 AK304524 AK074852 AK311325 AK296343 AK075548 BC030558 AJ011373 AY358452 AK298820 CU688906	-26316	+	TSC_hg19_v1_chr9_+_136293730 AJ011374	-57715	+	NM_001080483	38612	-	AB011177 NM_001145320	45830	+	TSC_hg19_v1_chr9_+_136399879 BC050544 NM_014694	48470	+	DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001135775|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242369|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242370|C9orf7|11094|chromosome 9 open reading frame 7##NM_017586|C9orf7|11094|chromosome 9 open reading frame 7##AK075416|C9orf7|11094|chromosome 9 open reading frame 7##AK304524|C9orf7|11094|chromosome 9 open reading frame 7##AK074852|C9orf7|11094|chromosome 9 open reading frame 7##AK311325|C9orf7|11094|chromosome 9 open reading frame 7##AK296343|C9orf7|11094|chromosome 9 open reading frame 7##AK075548|C9orf7|11094|chromosome 9 open reading frame 7##BC030558|C9orf7|11094|chromosome 9 open reading frame 7##AJ011373|C9orf7|11094|chromosome 9 open reading frame 7##AY358452|C9orf7|11094|chromosome 9 open reading frame 7##AK298820|C9orf7|11094|chromosome 9 open reading frame 7##AJ011374|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_001080483|TMEM8C|389827|transmembrane protein 8C##AB011177|ADAMTSL2|9719|ADAMTS-like 2##NM_001145320|ADAMTSL2|9719|ADAMTS-like 2##BC050544|ADAMTSL2|9719|ADAMTS-like 2##NM_014694|ADAMTSL2|9719|ADAMTS-like 2	0.0	
chr11	57192284	57192412	reg1035242.p1	4.151	+	M35670 X14088 AK312195 BC005929 M36805 Y00809 NM_001243245 NM_002728 X65787	-34232	-	AY358930 BC069126 AF132209 NM_006093	-43736	-	TSC_hg19_v1_chr11_+_57105826 NM_002559 BC069162 BC109287 BC074792 BC074793 AB016608	-86427	+	TSC_hg19_v1_chr11_-_57194537 AK311394 NM_014096	2183	-	TSC_hg19_v1_chr11_-_57194560 BC003163	2221	-	TSC_hg19_v1_chr11_-_57194589 AK311401	2239	-	M35670|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##X14088|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##AK312195|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##BC005929|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##M36805|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##Y00809|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##NM_001243245|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##NM_002728|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##X65787|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##AY358930|PRG3|10394|proteoglycan 3##BC069126|PRG3|10394|proteoglycan 3##AF132209|PRG3|10394|proteoglycan 3##NM_006093|PRG3|10394|proteoglycan 3##NM_002559|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC069162|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC109287|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC074792|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC074793|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##AB016608|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##AK311394|SLC43A3|29015|solute carrier family 43, member 3##NM_014096|SLC43A3|29015|solute carrier family 43, member 3##BC003163|SLC43A3|29015|solute carrier family 43, member 3##AK311401|SLC43A3|29015|solute carrier family 43, member 3	0.0	
chr12	12808708	12808830	reg1000797.p1	4.151	+	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	-43886	+	TSC_hg19_v1_chr12_+_12764831 BC106052 AF039081 NM_001310 AK307202	-43974	+	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	-93369	-	AK096388 NM_006143	40351	-	TSC_hg19_v1_chr12_+_12870308 AK312461 NM_004064 BC001971 AK298335	61357	+	TSC_hg19_v1_chr12_+_12878853 NM_001130415 AK127712 BC042478 AM393383	70087	+	BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2##BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2##AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2##AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2##AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16##AK096388|GPR19|2842|G protein-coupled receptor 19##NM_006143|GPR19|2842|G protein-coupled receptor 19##AK312461|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_004064|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##BC001971|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##AK298335|CDKN1B|1027|cyclin-dependent kinase inhibitor 1B (p27, Kip1)##NM_001130415|APOLD1|81575|apolipoprotein L domain containing 1##BC042478|APOLD1|81575|apolipoprotein L domain containing 1##AM393383|APOLD1|81575|apolipoprotein L domain containing 1	0.0	
chr13	34015261	34015393	reg1035948.p2	4.151	+	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	-90559	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	-155460	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-235163	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	235608	-	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	376900	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	376957	+	AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa	0.990792	CTCF.p2:34:0.991
chr14	92666260	92666379	reg1032718.p1	4.151	+	TSC_hg19_v1_chr14_+_92588315 BC060854 AK001912 AK001627 BC070095	-77993	+	TSC_hg19_v1_chr14_+_92588292 NM_017437	-78027	+	TSC_hg19_v1_chr14_-_92588066 BC104672 AB463916 HQ258048 BC126232 BC126234 NM_004545	-78211	-	AF520706 NM_153648	122605	+	AK295059 NM_153647	123217	+	NM_153646 AF520704 AF520705 BC069653	123857	+	BC060854|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##AK001912|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##AK001627|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##BC070095|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##NM_017437|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##BC104672|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##HQ258048|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##BC126232|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##BC126234|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##NM_004545|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##AF520706|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153648|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	0.5634	CTCF.p2:9:0.563
chr2	70315347	70315451	reg1028861.p5	4.151	+	TSC_hg19_v1_chr2_+_70314983 BC013020	-401	+	AK130439 TSC_hg19_v1_chr2_+_70314932	-482	+	TSC_hg19_v1_chr2_+_70314854 Z29505 X78137 AB464656 CU691762	-572	+	TSC_hg19_v1_chr2_-_70418137 BC002825 BC005079 AK000565 NM_017880	102722	-	CU677529 AB528896 BC015944 M77142 TSC_hg19_v1_chr2_-_70475711 NM_022037 NM_022173 AK303345	160320	-	TSC_hg19_v1_chr2_+_70485278 NM_016297 AF181490 BC051891 AY359063 BC033815 AK314453 AK225302 AK303043 BC022259 AB020715 DQ890801 DQ893956 CU689758	169851	+	AK130439|PCBP1|5093|poly(rC) binding protein 1##Z29505|PCBP1|5093|poly(rC) binding protein 1##X78137|PCBP1|5093|poly(rC) binding protein 1##BC002825|C2orf42|54980|chromosome 2 open reading frame 42##BC005079|C2orf42|54980|chromosome 2 open reading frame 42##AK000565|C2orf42|54980|chromosome 2 open reading frame 42##NM_017880|C2orf42|54980|chromosome 2 open reading frame 42##BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_016297|PCYOX1|51449|prenylcysteine oxidase 1##AF181490|PCYOX1|51449|prenylcysteine oxidase 1##BC051891|PCYOX1|51449|prenylcysteine oxidase 1##AY359063|PCYOX1|51449|prenylcysteine oxidase 1##BC033815|PCYOX1|51449|prenylcysteine oxidase 1##AK314453|PCYOX1|51449|prenylcysteine oxidase 1##AK225302|PCYOX1|51449|prenylcysteine oxidase 1##AK303043|PCYOX1|51449|prenylcysteine oxidase 1##BC022259|PCYOX1|51449|prenylcysteine oxidase 1##AB020715|PCYOX1|51449|prenylcysteine oxidase 1##DQ890801|PCYOX1|51449|prenylcysteine oxidase 1##DQ893956|PCYOX1|51449|prenylcysteine oxidase 1	0.0	
chr2	85170295	85170405	reg1031137.p2	4.151	+	TSC_hg19_v1_chr2_+_85133055 M92381	-37288	+	NM_021103 AK130949 D28363 TSC_hg19_v1_chr2_+_85132779 AK311952 BC016731 BC107889 S54005 BC016025 M20259 AY453400	-37555	+	TSC_hg19_v1_chr2_-_85108241 NM_001080824 BC051789	-62047	-	TSC_hg19_v1_chr2_+_85198299 NM_020122	27934	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	28141	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	190309	+	M92381|TMSB10|9168|thymosin beta 10##NM_021103|TMSB10|9168|thymosin beta 10##AK130949|TMSB10|9168|thymosin beta 10##AK311952|TMSB10|9168|thymosin beta 10##BC016731|TMSB10|9168|thymosin beta 10##BC107889|TMSB10|9168|thymosin beta 10##S54005|TMSB10|9168|thymosin beta 10##BC016025|TMSB10|9168|thymosin beta 10##M20259|TMSB10|9168|thymosin beta 10##AY453400|TMSB10|9168|thymosin beta 10##NM_001080824|C2orf89|129293|chromosome 2 open reading frame 89##BC051789|C2orf89|129293|chromosome 2 open reading frame 89##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)	0.0	
chr5	1107969	1108103	reg1036858.p1	4.151	+	TSC_hg19_v1_chr5_+_1008916 BC012176 AF358137 AB062887 NM_033120	-99003	+	TSC_hg19_v1_chr5_-_997422 AK126199 NM_001242737	-110601	-	TSC_hg19_v1_chr5_+_892974 NM_001166260 NM_004237 AK310376 BC000404 BC019294 U96131 AB527502 EU446745 CU674196 CR456744 L40384	-215004	+	CU675797 AF105365 TSC_hg19_v1_chr5_-_1112151 AK302856 BC098390 BC007760 BC018982 NM_006598	4121	-	AK096054 AK290811 NM_001003841 BC146290 BC148801 AB527217 AY591756 AY596807	93701	+	AK055798 NM_182632 AK298257 BC056757	117454	+	BC012176|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF358137|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AB062887|NKD2|85409|naked cuticle homolog 2 (Drosophila)##NM_033120|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AK126199|LOC100506688|100506688|uncharacterized LOC100506688##NM_001242737|LOC100506688|100506688|uncharacterized LOC100506688##NM_001166260|TRIP13|9319|thyroid hormone receptor interactor 13##NM_004237|TRIP13|9319|thyroid hormone receptor interactor 13##AK310376|TRIP13|9319|thyroid hormone receptor interactor 13##BC000404|TRIP13|9319|thyroid hormone receptor interactor 13##BC019294|TRIP13|9319|thyroid hormone receptor interactor 13##U96131|TRIP13|9319|thyroid hormone receptor interactor 13##EU446745|TRIP13|9319|thyroid hormone receptor interactor 13##CR456744|TRIP13|9319|thyroid hormone receptor interactor 13##L40384|TRIP13|9319|thyroid hormone receptor interactor 13##AF105365|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK302856|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC098390|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC007760|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC018982|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##NM_006598|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK096054|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK290811|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##NM_001003841|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC146290|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##BC148801|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY591756|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AY596807|SLC6A19|340024|solute carrier family 6 (neutral amino acid transporter), member 19##AK055798|SLC6A18|348932|solute carrier family 6, member 18##NM_182632|SLC6A18|348932|solute carrier family 6, member 18##AK298257|SLC6A18|348932|solute carrier family 6, member 18##BC056757|SLC6A18|348932|solute carrier family 6, member 18	0.327359	CTCF.p2:-30:0.327
chr6	139233610	139233753	reg1032816.p1	4.151	+	NM_001077706 NM_001195037	-116434	+	AK092592 AX747618 NM_001242740	-138880	-	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	-138891	+	BC021211 TSC_hg19_v1_chr6_-_139309122 AB209143	75396	-	TSC_hg19_v1_chr6_-_139309357 BC035286 AK312938	75667	-	TSC_hg19_v1_chr6_-_139309391 BC012764 NM_001128617 NM_031922	75729	-	NM_001077706|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##NM_001195037|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##AK092592|LOC100507462|100507462|uncharacterized LOC100507462##NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A##BC021211|REPS1|85021|RALBP1 associated Eps domain containing 1##AB209143|REPS1|85021|RALBP1 associated Eps domain containing 1##BC035286|REPS1|85021|RALBP1 associated Eps domain containing 1##AK312938|REPS1|85021|RALBP1 associated Eps domain containing 1##BC012764|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_001128617|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_031922|REPS1|85021|RALBP1 associated Eps domain containing 1	0.0	
chr10	31892470	31892562	reg1030650.p1	4.150	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-282427	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-284383	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-284559	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	325208	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	325269	-	TSC_hg19_v1_chr10_-_32344938 AB462413	452416	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.0	
chr1	183624879	183625008	reg1010116.p2	4.150	+	BC021711 NM_203454 AK098557	-2495	-	NM_015149 AF186780 BX537416 AK316526 AK295179 AK295611 BC136591	-19601	+	TSC_hg19_v1_chr1_-_183604891 BC057237 NM_005717 BC071857	-20003	-	AK311716 TSC_hg19_v1_chr1_+_183774253 AF186779 AB023176 AK304293 BC039250 AK309237 AK311701	149348	+	AB385353 CU690156 AK293973 TSC_hg19_v1_chr1_-_184006634	381622	-	AB011156 AF288389 NM_015101 BC035672 AK095192 TSC_hg19_v1_chr1_-_184006893	381921	-	BC021711|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##NM_203454|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##AK098557|APOBEC4|403314|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 4 (putative)##NM_015149|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AF186780|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BX537416|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK316526|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK295179|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK295611|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC136591|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC057237|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##NM_005717|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##BC071857|ARPC5|10092|actin related protein 2/3 complex, subunit 5, 16kDa##AK311716|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AF186779|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AB023176|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK304293|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##BC039250|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK311701|RGL1|23179|ral guanine nucleotide dissociation stimulator-like 1##AK293973|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AB011156|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AF288389|GLT25D2|23127|glycosyltransferase 25 domain containing 2##NM_015101|GLT25D2|23127|glycosyltransferase 25 domain containing 2##BC035672|GLT25D2|23127|glycosyltransferase 25 domain containing 2##AK095192|GLT25D2|23127|glycosyltransferase 25 domain containing 2	0.0	
chr12	3384575	3384675	reg1000666.p1	4.150	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-198063	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-315564	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-316031	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	215816	+	AK125333 TSC_hg19_v1_chr12_-_3601984	217360	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	477643	-	NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B	0.0	
chr16	48644192	48644372	reg1030298.p1	4.150	+	BC051897 TSC_hg19_v1_chr16_-_48644092 AB014515 BC152472 NM_153029	-166	-	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	-225030	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	-244491	-	AB527638 TSC_hg19_v1_chr16_-_49315397	671111	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	671218	-	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	671452	-	BC051897|N4BP1|9683|NEDD4 binding protein 1##AB014515|N4BP1|9683|NEDD4 binding protein 1##BC152472|N4BP1|9683|NEDD4 binding protein 1##NM_153029|N4BP1|9683|NEDD4 binding protein 1##BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor	0.0	CTCF.p2:-108:0.644
chr18	9055361	9055526	reg1036008.p2	4.150	+	AB384528 TSC_hg19_v1_chr18_+_8718600	-336919	+	AK131528 NM_015210	-338075	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	-445697	+	TSC_hg19_v1_chr18_+_9102620 NM_021074	47179	+	TSC_hg19_v1_chr18_+_9102715 AK312129 BC001632 BC017487 M22538 AK291865 AB590136 BC071689 DQ892593 DQ895813 CR456928	47277	+	TSC_hg19_v1_chr18_+_9136811 NM_001083625 NM_015208 BC070234 AK024808 AY373757 BC057225 AL834204	81348	+	AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165##NM_021074|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK312129|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC001632|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC017487|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##M22538|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK291865|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC071689|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ892593|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ895813|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##CR456928|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##NM_001083625|ANKRD12|23253|ankyrin repeat domain 12##NM_015208|ANKRD12|23253|ankyrin repeat domain 12##BC070234|ANKRD12|23253|ankyrin repeat domain 12##AK024808|ANKRD12|23253|ankyrin repeat domain 12##AY373757|ANKRD12|23253|ankyrin repeat domain 12##BC057225|ANKRD12|23253|ankyrin repeat domain 12##AL834204|ANKRD12|23253|ankyrin repeat domain 12	0.935039	CTCF.p2:-9:0.935
chr22	38573228	38573361	reg1025314.p3	4.150	+	TSC_hg19_v1_chr22_-_38506676 AY358164 NM_025045	-66617	-	CU677367 TSC_hg19_v1_chr22_-_38506639 AK026235 BC015619	-66692	-	AF132610 NM_013356	-94136	-	CR456543 TSC_hg19_v1_chr22_-_38577838 AK291212 BC036742 AL080187 NM_001004426 NM_003560 AF064594 AK308308 BC051904 AK096521 AK290825 NM_001199562 AK300459	4499	-	NM_001161572 NM_001161574 NM_012323 TSC_hg19_v1_chr22_+_38597996 AK002001 BC067751 AK300932 AJ010857	24683	+	BC015037 TSC_hg19_v1_chr22_+_38598094 AB025247	24792	+	AY358164|BAIAP2L2|80115|BAI1-associated protein 2-like 2##NM_025045|BAIAP2L2|80115|BAI1-associated protein 2-like 2##AK026235|BAIAP2L2|80115|BAI1-associated protein 2-like 2##BC015619|BAIAP2L2|80115|BAI1-associated protein 2-like 2##AF132610|SLC16A8|23539|solute carrier family 16, member 8 (monocarboxylic acid transporter 3)##NM_013356|SLC16A8|23539|solute carrier family 16, member 8 (monocarboxylic acid transporter 3)##CR456543|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK291212|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##BC036742|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AL080187|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001004426|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_003560|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AF064594|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK308308|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##BC051904|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK096521|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK290825|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001199562|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK300459|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	0.0	
chr22	39495556	39495737	reg1030467.p1	4.150	+	NM_001166002 NM_001166003 NM_001166004 NM_181773 BC069023 CR456481	-2376	+	AK092614 NM_021822 AK315650 BC061914 AF182420 CR456472 BC009683 BC024268 AB266487 AB462950 CU013022 CU013310 CU692904 JF262036	-22459	+	AK294810 NM_001006666 NM_145298	-59006	+	TSC_hg19_v1_chr22_-_39529023 BC128418	33401	-	DQ064603 AB528611 EU446785 CU690844 BC051773 TSC_hg19_v1_chr22_-_39548584 NM_175709 AK124408	52921	-	TSC_hg19_v1_chr22_-_39636906 NM_033016 X83705	141263	-	NM_001166002|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166003|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_001166004|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##NM_181773|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##BC069023|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##CR456481|APOBEC3H|164668|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3H##AK092614|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##NM_021822|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK315650|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC061914|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AF182420|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CR456472|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC009683|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##BC024268|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AB266487|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013022|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##CU013310|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##JF262036|APOBEC3G|60489|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G##AK294810|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_001006666|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##NM_145298|APOBEC3F|200316|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F##BC128418|CBX7|23492|chromobox homolog 7##DQ064603|CBX7|23492|chromobox homolog 7##EU446785|CBX7|23492|chromobox homolog 7##BC051773|CBX7|23492|chromobox homolog 7##NM_175709|CBX7|23492|chromobox homolog 7##NM_033016|PDGFB|5155|platelet-derived growth factor beta polypeptide##X83705|PDGFB|5155|platelet-derived growth factor beta polypeptide	0.0	
chr2	73461368	73461531	reg1031239.p1	4.150	+	TSC_hg19_v1_chr2_+_73461445 AK098549 AK293175	-6	+	NM_001009570 NM_001166284 NM_001166285 NM_006429 BC088351 TSC_hg19_v1_chr2_+_73461435 AK291961 AK293597 AK297846 AK298153 AK302078	-50	+	TSC_hg19_v1_chr2_-_73460365 AY358605 BC005069 NM_032319 AK312077	-1085	-	TSC_hg19_v1_chr2_+_73461452 AF026292 BC019296	1	+	TSC_hg19_v1_chr2_+_73461457 AK222478	15	+	BC169255 TSC_hg19_v1_chr2_-_73492731	31272	-	AK098549|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK293175|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##NM_001009570|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##NM_001166284|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##NM_001166285|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##NM_006429|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##BC088351|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK291961|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK293597|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK297846|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK298153|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK302078|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AY358605|PRADC1|84279|protease-associated domain containing 1##BC005069|PRADC1|84279|protease-associated domain containing 1##NM_032319|PRADC1|84279|protease-associated domain containing 1##AK312077|PRADC1|84279|protease-associated domain containing 1##AF026292|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##BC019296|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK222478|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##BC169255|FBXO41|150726|F-box protein 41	0.0	
chr6	12289868	12290048	reg1001216.p3	4.150	+	NM_002114	-277235	+	NM_001143948 NM_032744	-510679	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-751460	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	635	+	TSC_hg19_v1_chr6_+_12514301 D28417	224344	+	AK295263 TSC_hg19_v1_chr6_+_12716998	426985	+	NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1	0.0	
chr6	161521310	161521432	reg1045508.p1	4.150	+	AK094629 TSC_hg19_v1_chr6_-_161413451	-107958	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-108513	+	TSC_hg19_v1_chr6_+_161412815 AF002715 NM_005922 NM_006724	-108557	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	173689	-	AK057286 NM_001080378 NM_152410 BC044227	1626798	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	1627356	-	BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AF002715|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_005922|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_006724|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.011081	
chrX	129243152	129243332	reg1033800.p2	4.150	+	NM_021946 TSC_hg19_v1_chrX_+_129139243 AK074089	-104036	+	TSC_hg19_v1_chrX_+_129040144 NM_001166221 NM_006649 AK291918 AK298578 BC009649 BC001149 AK304563 BC014987 AF039694 AB590128 CU679427 DQ892549 DQ895760	-203111	+	TSC_hg19_v1_chrX_-_128977856 AL161962 AK096967 AF151847 AY358558 BC006200 BC012826 BC003128 AK001112 AY952881 NM_016032	-265414	-	TSC_hg19_v1_chrX_-_129244438 U32645	1202	-	TSC_hg19_v1_chrX_-_129244474 NM_001421	1236	-	BC017194 AK314972 NM_001127197 TSC_hg19_v1_chrX_-_129244713	1445	-	NM_021946|BCORL1|63035|BCL6 corepressor-like 1##AK074089|BCORL1|63035|BCL6 corepressor-like 1##NM_001166221|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_006649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK291918|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK298578|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC009649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC001149|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK304563|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC014987|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ892549|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ895760|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9##U32645|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001421|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##BC017194|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##AK314972|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001127197|ELF4|2000|E74-like factor 4 (ets domain transcription factor)	0.0	
chrX	133511703	133511839	reg1031953.p1	4.150	+	TSC_hg19_v1_chrX_+_133507317 AY157622 NM_001015877 NM_032335 NM_032458 AL832725 AK290095 AK303369 BC005994 AB058726	-4394	+	NM_001101357	-140695	+	TSC_hg19_v1_chrX_-_133119645 L47125 AK300168 NM_001164617 NM_001164618 NM_001164619 NM_004484	-392120	-	TSC_hg19_v1_chrX_+_133594194 NM_000194 AK313435	82426	+	TSC_hg19_v1_chrX_+_133594225 M31642	82485	+	TSC_hg19_v1_chrX_+_133594303 BC000578 BT019350 CR407645 DQ895107 DQ895109 EU176316 EU176655 L29382 L29383	82548	+	AY157622|PHF6|84295|PHD finger protein 6##NM_001015877|PHF6|84295|PHD finger protein 6##NM_032335|PHF6|84295|PHD finger protein 6##NM_032458|PHF6|84295|PHD finger protein 6##AL832725|PHF6|84295|PHD finger protein 6##AK290095|PHF6|84295|PHD finger protein 6##AK303369|PHF6|84295|PHD finger protein 6##BC005994|PHF6|84295|PHD finger protein 6##AB058726|PHF6|84295|PHD finger protein 6##NM_001101357|CCDC160|347475|coiled-coil domain containing 160##L47125|GPC3|2719|glypican 3##AK300168|GPC3|2719|glypican 3##NM_001164617|GPC3|2719|glypican 3##NM_001164618|GPC3|2719|glypican 3##NM_001164619|GPC3|2719|glypican 3##NM_004484|GPC3|2719|glypican 3##NM_000194|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##AK313435|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##M31642|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##BC000578|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##BT019350|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##CR407645|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895107|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895109|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176316|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176655|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29382|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29383|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1	0.984869	CTCF.p2:-9:0.985
chr10	97501700	97501793	reg1032238.p2	4.149	+	AJ133133 AJ133134 NM_001098175	-30211	+	BC068449 DQ278872 NM_001143973 NM_015631	-47847	-	BC061582 TSC_hg19_v1_chr10_-_97453684 CU686635 AY359022 AL050022 AK299141 AK075357 AK098295	-48100	-	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	13794	+	AK294399 NM_001130446	165975	+	NM_001001732 NM_001159747 AK302377 BC075861	258118	+	AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##BC068449|TCTN3|26123|tectonic family member 3##DQ278872|TCTN3|26123|tectonic family member 3##NM_001143973|TCTN3|26123|tectonic family member 3##NM_015631|TCTN3|26123|tectonic family member 3##BC061582|TCTN3|26123|tectonic family member 3##AY359022|TCTN3|26123|tectonic family member 3##AL050022|TCTN3|26123|tectonic family member 3##AK299141|TCTN3|26123|tectonic family member 3##AK075357|TCTN3|26123|tectonic family member 3##AK098295|TCTN3|26123|tectonic family member 3##NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B##NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B	0.0	
chr1	3702149	3702290	reg1034855.p2	4.149	+	TSC_hg19_v1_chr1_+_3689334 BC042129 NM_001163724	-12883	+	AK057387 BC112112 NM_152492 BC112108	-33256	+	TSC_hg19_v1_chr1_-_3663940 AB007964 BC035073 BC062467 BC089039	-38302	-	TSC_hg19_v1_chr1_-_3713056 BC031301 NM_020710	10847	-	TSC_hg19_v1_chr1_-_3773757 AB011134 AK308191	71469	-	TSC_hg19_v1_chr1_-_3773776 BC001640 BC047450 BC026020 BC050721 NM_014704	71565	-	BC042129|LOC388588|388588|uncharacterized protein LOC388588##NM_001163724|LOC388588|388588|uncharacterized protein LOC388588##AK057387|CCDC27|148870|coiled-coil domain containing 27##BC112112|CCDC27|148870|coiled-coil domain containing 27##NM_152492|CCDC27|148870|coiled-coil domain containing 27##BC112108|CCDC27|148870|coiled-coil domain containing 27##AB007964|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC035073|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC089039|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC031301|LRRC47|57470|leucine rich repeat containing 47##NM_020710|LRRC47|57470|leucine rich repeat containing 47##AB011134|CEP104|9731|centrosomal protein 104kDa##AK308191|CEP104|9731|centrosomal protein 104kDa##BC001640|CEP104|9731|centrosomal protein 104kDa##BC047450|CEP104|9731|centrosomal protein 104kDa##BC026020|CEP104|9731|centrosomal protein 104kDa##BC050721|CEP104|9731|centrosomal protein 104kDa##NM_014704|CEP104|9731|centrosomal protein 104kDa	0.010699	
chr16	10352810	10352891	reg1033934.p1	4.149	+	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	-76173	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	-76662	-	BC143273 U09002 NM_001134408	-77017	-	AK093414 AX748112 TSC_hg19_v1_chr16_+_10479917 AK296565 AK299040 BC033891 BC041882	127067	+	NM_024997 BC137079 BC144468	169890	+	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	321640	-	NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2	0.086381	
chr16	87899618	87899715	reg1033275.p2	4.149	+	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	-100096	-	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	-100151	-	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	-262956	+	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	3409	-	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	70481	-	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	85502	+	BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##BC001044|KLHDC4|54758|kelch domain containing 4##DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3##DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein	0.0	
chr17	8060182	8060310	reg1031273.p1	4.149	+	BC028207 TSC_hg19_v1_chr17_-_8059648 AK295410	-511	-	TSC_hg19_v1_chr17_-_8055723 AB088477 AF022991 AK291061 NM_002616	-4526	-	BC039887 AB049064 AB463716 NM_001165967 NM_032580	-32844	-	AL050223 TSC_hg19_v1_chr17_-_8064059	3756	-	TSC_hg19_v1_chr17_-_8066267 BC002737 AK289555 BC019608 BC033870 AK225777 NM_014232	6046	-	CU687070 BC006292 TSC_hg19_v1_chr17_-_8079699 AK127891 AK315666 AK027813 BC119730 BC119731 BC127649 BC127650 AY358525 BC070231 NM_032354 NM_183065	19414	-	BC028207|PER1|5187|period homolog 1 (Drosophila)##AK295410|PER1|5187|period homolog 1 (Drosophila)##AB088477|PER1|5187|period homolog 1 (Drosophila)##AF022991|PER1|5187|period homolog 1 (Drosophila)##AK291061|PER1|5187|period homolog 1 (Drosophila)##NM_002616|PER1|5187|period homolog 1 (Drosophila)##BC039887|HES7|84667|hairy and enhancer of split 7 (Drosophila)##AB049064|HES7|84667|hairy and enhancer of split 7 (Drosophila)##NM_001165967|HES7|84667|hairy and enhancer of split 7 (Drosophila)##NM_032580|HES7|84667|hairy and enhancer of split 7 (Drosophila)##AL050223|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##BC002737|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##AK289555|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##BC019608|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##BC033870|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##AK225777|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##NM_014232|VAMP2|6844|vesicle-associated membrane protein 2 (synaptobrevin 2)##BC006292|TMEM107|84314|transmembrane protein 107##AK315666|TMEM107|84314|transmembrane protein 107##AK027813|TMEM107|84314|transmembrane protein 107##BC119730|TMEM107|84314|transmembrane protein 107##BC119731|TMEM107|84314|transmembrane protein 107##BC127649|TMEM107|84314|transmembrane protein 107##BC127650|TMEM107|84314|transmembrane protein 107##AY358525|TMEM107|84314|transmembrane protein 107##BC070231|TMEM107|84314|transmembrane protein 107##NM_032354|TMEM107|84314|transmembrane protein 107##NM_183065|TMEM107|84314|transmembrane protein 107	0.0	
chr19	10677528	10677674	reg1034439.p1	4.149	+	TSC_hg19_v1_chr19_-_10676697 AK093879 AX748348 NM_023008 AK300850	-904	-	BC009303 TSC_hg19_v1_chr19_-_10676685 AL833189 AK300780	-935	-	TSC_hg19_v1_chr19_+_10654592 AK056210 AK314712 AK316454 BC068992 AK223383 BC007639 NM_032885 AJ312332 CU686689	-22923	+	CR542158 CU674892 U20498 DQ892872 DQ892951 DQ896120 AB464505 U49399 U40343 TSC_hg19_v1_chr19_-_10679530	1828	-	TSC_hg19_v1_chr19_-_10679653 NM_001800 BC001822 NM_079421	2037	-	CU678450 CU678534 CU678860 BC003612 BC003387 AF020797 AK222946 AK315689 AK023863 BC005021 NM_005498	20347	-	AK093879|KRI1|65095|KRI1 homolog (S. cerevisiae)##NM_023008|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK300850|KRI1|65095|KRI1 homolog (S. cerevisiae)##BC009303|KRI1|65095|KRI1 homolog (S. cerevisiae)##AL833189|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK300780|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##CR542158|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U20498|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892872|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892951|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ896120|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U49399|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U40343|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##NM_001800|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##BC001822|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##NM_079421|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##BC003612|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##BC003387|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AF020797|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK222946|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK315689|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##AK023863|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##BC005021|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit##NM_005498|AP1M2|10053|adaptor-related protein complex 1, mu 2 subunit	0.0	
chr19	11090813	11090954	reg1031294.p1	4.149	+	TSC_hg19_v1_chr19_+_11071823 NM_001128849 U29175 D26156	-19059	+	TSC_hg19_v1_chr19_+_11071720 BC035916	-19133	+	TSC_hg19_v1_chr19_+_11071717 BC007302	-19168	+	BC136644 AB590582 BC151849 EU430756 EU430757 EU430758 EU430759 NM_001128845 NM_001128846 NM_001128847 NM_001128848 AB209313	3993	+	NM_000527 NM_001195798 NM_001195799 NM_001195800 NM_001195802 NM_001195803 TSC_hg19_v1_chr19_+_11200115	109194	+	TSC_hg19_v1_chr19_+_11200138 AK295612 AK296312 AK299038 AK300313	109249	+	NM_001128849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##U29175|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##D26156|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC007302|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC136644|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC151849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430756|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430757|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430758|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430759|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128845|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128846|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128847|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128848|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##AB209313|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_000527|LDLR|3949|low density lipoprotein receptor##NM_001195798|LDLR|3949|low density lipoprotein receptor##NM_001195799|LDLR|3949|low density lipoprotein receptor##NM_001195800|LDLR|3949|low density lipoprotein receptor##NM_001195802|LDLR|3949|low density lipoprotein receptor##NM_001195803|LDLR|3949|low density lipoprotein receptor##AK295612|LDLR|3949|low density lipoprotein receptor##AK296312|LDLR|3949|low density lipoprotein receptor##AK299038|LDLR|3949|low density lipoprotein receptor##AK300313|LDLR|3949|low density lipoprotein receptor	0.0	
chr20	17940390	17940473	reg1034394.p2	4.149	+	BC054871 NM_001014977 NM_178477 BC062735	-259833	+	NM_001159495	-266112	+	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	-277548	-	BT007191 AB464237 TSC_hg19_v1_chr20_-_17949155 AK223308 AK001793 AK129505 NM_014426 BC093623 BC093980 BC143274	8783	-	TSC_hg19_v1_chr20_-_17949438 BC002724 BC062638 BC064555 BC073171 AK123903 AK308017 AK296947 BC000100 AF121855 NM_152227	9009	-	TSC_hg19_v1_chr20_+_17949742 AF306686 AK315532 AF306684 AF306685 AK027503 BC016869 NM_052865	9231	+	BC054871|BANF2|140836|barrier to autointegration factor 2##NM_001014977|BANF2|140836|barrier to autointegration factor 2##NM_178477|BANF2|140836|barrier to autointegration factor 2##BC062735|BANF2|140836|barrier to autointegration factor 2##NM_001159495|BANF2|140836|barrier to autointegration factor 2##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BT007191|SNX5|27131|sorting nexin 5##AK223308|SNX5|27131|sorting nexin 5##AK001793|SNX5|27131|sorting nexin 5##AK129505|SNX5|27131|sorting nexin 5##NM_014426|SNX5|27131|sorting nexin 5##BC093623|SNX5|27131|sorting nexin 5##BC093980|SNX5|27131|sorting nexin 5##BC143274|SNX5|27131|sorting nexin 5##BC002724|SNX5|27131|sorting nexin 5##BC062638|SNX5|27131|sorting nexin 5##AK123903|SNX5|27131|sorting nexin 5##AK308017|SNX5|27131|sorting nexin 5##AK296947|SNX5|27131|sorting nexin 5##BC000100|SNX5|27131|sorting nexin 5##AF121855|SNX5|27131|sorting nexin 5##NM_152227|SNX5|27131|sorting nexin 5##AF306686|C20orf72|92667|chromosome 20 open reading frame 72##AK315532|C20orf72|92667|chromosome 20 open reading frame 72##AF306684|C20orf72|92667|chromosome 20 open reading frame 72##AF306685|C20orf72|92667|chromosome 20 open reading frame 72##AK027503|C20orf72|92667|chromosome 20 open reading frame 72##BC016869|C20orf72|92667|chromosome 20 open reading frame 72##NM_052865|C20orf72|92667|chromosome 20 open reading frame 72	0.0	
chr20	52372725	52372853	reg1036395.p1	4.149	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-161990	-	AF041259 NM_006526	-173154	-	AK302570 NM_001193421	-570968	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	314273	-	AK315220 NM_003657	314514	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	417731	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr2	70330801	70330932	reg1032994.p1	4.149	+	TSC_hg19_v1_chr2_+_70314983 BC013020	-15868	+	AK130439 TSC_hg19_v1_chr2_+_70314932	-15949	+	TSC_hg19_v1_chr2_+_70314854 Z29505 X78137 AB464656 CU691762	-16039	+	TSC_hg19_v1_chr2_-_70418137 BC002825 BC005079 AK000565 NM_017880	87255	-	CU677529 AB528896 BC015944 M77142 TSC_hg19_v1_chr2_-_70475711 NM_022037 NM_022173 AK303345	144853	-	TSC_hg19_v1_chr2_+_70485278 NM_016297 AF181490 BC051891 AY359063 BC033815 AK314453 AK225302 AK303043 BC022259 AB020715 DQ890801 DQ893956 CU689758	154384	+	AK130439|PCBP1|5093|poly(rC) binding protein 1##Z29505|PCBP1|5093|poly(rC) binding protein 1##X78137|PCBP1|5093|poly(rC) binding protein 1##BC002825|C2orf42|54980|chromosome 2 open reading frame 42##BC005079|C2orf42|54980|chromosome 2 open reading frame 42##AK000565|C2orf42|54980|chromosome 2 open reading frame 42##NM_017880|C2orf42|54980|chromosome 2 open reading frame 42##BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_016297|PCYOX1|51449|prenylcysteine oxidase 1##AF181490|PCYOX1|51449|prenylcysteine oxidase 1##BC051891|PCYOX1|51449|prenylcysteine oxidase 1##AY359063|PCYOX1|51449|prenylcysteine oxidase 1##BC033815|PCYOX1|51449|prenylcysteine oxidase 1##AK314453|PCYOX1|51449|prenylcysteine oxidase 1##AK225302|PCYOX1|51449|prenylcysteine oxidase 1##AK303043|PCYOX1|51449|prenylcysteine oxidase 1##BC022259|PCYOX1|51449|prenylcysteine oxidase 1##AB020715|PCYOX1|51449|prenylcysteine oxidase 1##DQ890801|PCYOX1|51449|prenylcysteine oxidase 1##DQ893956|PCYOX1|51449|prenylcysteine oxidase 1	0.814433	CTCF.p2:24:0.814
chr3	124620441	124620621	reg1002660.p2	4.149	+	TSC_hg19_v1_chr3_-_124606213 BC006541 NM_002213 X53002	-14320	-	TSC_hg19_v1_chr3_-_124605863 AB587397 DQ892778 DQ896025 M35011 AK315429 J05633	-14665	-	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	-171215	+	AF286113 AB035807 AY358831 TSC_hg19_v1_chr3_-_124653596 NM_033049	33052	-	BC067235 TSC_hg19_v1_chr3_-_124732404	111861	-	AB384586 NM_020733 TSC_hg19_v1_chr3_-_124774842	154269	-	BC006541|ITGB5|3693|integrin, beta 5##NM_002213|ITGB5|3693|integrin, beta 5##X53002|ITGB5|3693|integrin, beta 5##DQ892778|ITGB5|3693|integrin, beta 5##DQ896025|ITGB5|3693|integrin, beta 5##M35011|ITGB5|3693|integrin, beta 5##AK315429|ITGB5|3693|integrin, beta 5##J05633|ITGB5|3693|integrin, beta 5##AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase##AF286113|MUC13|56667|mucin 13, cell surface associated##AB035807|MUC13|56667|mucin 13, cell surface associated##AY358831|MUC13|56667|mucin 13, cell surface associated##NM_033049|MUC13|56667|mucin 13, cell surface associated##BC067235|HEG1|57493|HEG homolog 1 (zebrafish)##NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)	0.0	
chr3	16360934	16361070	reg1032342.p2	4.149	+	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-54294	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	-54613	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-144808	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	194016	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	194222	-	BX648638 AK303026 NM_001190811	285268	-	NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like	0.963005	CTCF.p2:25:0.963
chr3	171825152	171825326	reg1026850.p1	4.149	+	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-66902	+	TSC_hg19_v1_chr3_+_171757442 AY358367	-67781	+	TSC_hg19_v1_chr3_+_171757437 AK127826	-67805	+	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	340984	-	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	415939	-	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	603651	-	AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AY358367|FNDC3B|64778|fibronectin type III domain containing 3B##AK127826|FNDC3B|64778|fibronectin type III domain containing 3B##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1	0.0	
chr9	27529047	27529167	reg1004325.p1	4.149	+	AF146759 AF315688 NM_020124 AY358855 AB463795	-4785	+	BC137351 BC137352 BC144602 BC014307 AJ278482 NM_001161585 NM_020641	-231986	-	AK294887 NM_000459	-419965	+	TSC_hg19_v1_chr9_-_27529809 AL832572 BC033027 AK023266 NM_024761	543	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	44364	-	AK057806 JN681271 NM_145005	44734	-	AF146759|IFNK|56832|interferon, kappa##AF315688|IFNK|56832|interferon, kappa##NM_020124|IFNK|56832|interferon, kappa##AY358855|IFNK|56832|interferon, kappa##BC137351|C9orf11|54586|chromosome 9 open reading frame 11##BC137352|C9orf11|54586|chromosome 9 open reading frame 11##BC144602|C9orf11|54586|chromosome 9 open reading frame 11##BC014307|C9orf11|54586|chromosome 9 open reading frame 11##AJ278482|C9orf11|54586|chromosome 9 open reading frame 11##NM_001161585|C9orf11|54586|chromosome 9 open reading frame 11##NM_020641|C9orf11|54586|chromosome 9 open reading frame 11##AK294887|TEK|7010|TEK tyrosine kinase, endothelial##NM_000459|TEK|7010|TEK tyrosine kinase, endothelial##AL832572|MOB3B|79817|MOB kinase activator 3B##BC033027|MOB3B|79817|MOB kinase activator 3B##AK023266|MOB3B|79817|MOB kinase activator 3B##NM_024761|MOB3B|79817|MOB kinase activator 3B##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72	0.0	
chr10	76772334	76772413	reg1025721.p5	4.148	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-186019	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-835786	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-835843	+	AY686755 NM_001003892 BC137321 BC137322	45932	-	AB027004 AB103375 NM_016364	86874	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	96541	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr1	210001157	210001270	reg1034090.p1	4.148	+	BC014852 AK312857 AK296960 TSC_hg19_v1_chr1_-_209979488 NM_001206696 NM_006147	-21760	-	TSC_hg19_v1_chr1_-_209957872 BC039719 NM_152485 AK057807	-43326	-	TSC_hg19_v1_chr1_+_209941909 AK126139	-59297	+	TSC_hg19_v1_chr1_+_210001335 NM_014388 AK314061 AK289613	90	+	BC022964 TSC_hg19_v1_chr1_+_210001361	143	+	TSC_hg19_v1_chr1_+_210001363 CR749825	156	+	BC014852|IRF6|3664|interferon regulatory factor 6##AK312857|IRF6|3664|interferon regulatory factor 6##AK296960|IRF6|3664|interferon regulatory factor 6##NM_001206696|IRF6|3664|interferon regulatory factor 6##NM_006147|IRF6|3664|interferon regulatory factor 6##BC039719|C1orf74|148304|chromosome 1 open reading frame 74##NM_152485|C1orf74|148304|chromosome 1 open reading frame 74##AK057807|C1orf74|148304|chromosome 1 open reading frame 74##AK126139|TRAF3IP3|80342|TRAF3 interacting protein 3##NM_014388|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##AK314061|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##AK289613|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##BC022964|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)##CR749825|DIEXF|27042|digestive organ expansion factor homolog (zebrafish)	0.019314	
chr17	1496063	1496243	reg1027837.p1	4.148	+	BC082976 TSC_hg19_v1_chr17_-_1466077 BC027177 D30036 M73704 BC045108 BC068538 NM_006224	-30071	-	TSC_hg19_v1_chr17_-_1420177 AK312844 NM_001135642 NM_016532 NM_130766	-75974	-	TSC_hg19_v1_chr17_-_1419907 DQ892815 DQ896061 AB529166 AK297955 AK303907 AK307293 AB036829 AB036830 AK312585 BC004362	-76187	-	AF289592 TSC_hg19_v1_chr17_-_1531711 AB120364	35487	-	TSC_hg19_v1_chr17_-_1532115 BC027923 NM_152346 BC071859	35991	-	D63483 AK310174 AB052950 AB052949 AB052947 D86864 TSC_hg19_v1_chr17_-_1549050 AK291810 AB052948 BC039735 NM_003693 NM_145350 NM_145352 AK298737	52884	-	BC082976|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC027177|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D30036|PITPNA|5306|phosphatidylinositol transfer protein, alpha##M73704|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC045108|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC068538|PITPNA|5306|phosphatidylinositol transfer protein, alpha##NM_006224|PITPNA|5306|phosphatidylinositol transfer protein, alpha##AK312844|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_001135642|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_016532|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_130766|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ892815|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ896061|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK297955|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK303907|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK307293|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036829|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036830|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312585|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC004362|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AF289592|SLC43A2|124935|solute carrier family 43, member 2##AB120364|SLC43A2|124935|solute carrier family 43, member 2##BC027923|SLC43A2|124935|solute carrier family 43, member 2##NM_152346|SLC43A2|124935|solute carrier family 43, member 2##BC071859|SLC43A2|124935|solute carrier family 43, member 2##D63483|SCARF1|8578|scavenger receptor class F, member 1##AK310174|SCARF1|8578|scavenger receptor class F, member 1##AB052950|SCARF1|8578|scavenger receptor class F, member 1##AB052949|SCARF1|8578|scavenger receptor class F, member 1##AB052947|SCARF1|8578|scavenger receptor class F, member 1##D86864|SCARF1|8578|scavenger receptor class F, member 1##AK291810|SCARF1|8578|scavenger receptor class F, member 1##AB052948|SCARF1|8578|scavenger receptor class F, member 1##BC039735|SCARF1|8578|scavenger receptor class F, member 1##NM_003693|SCARF1|8578|scavenger receptor class F, member 1##NM_145350|SCARF1|8578|scavenger receptor class F, member 1##NM_145352|SCARF1|8578|scavenger receptor class F, member 1##AK298737|SCARF1|8578|scavenger receptor class F, member 1	0.0	
chr20	62151169	62151250	reg1028182.p1	4.148	+	TSC_hg19_v1_chr20_-_62130437 X70940 AK307536 NM_001958 BC110409	-20696	-	BT007043 AB527167 Y15065 BC000699 AF110020 TSC_hg19_v1_chr20_-_62104002 AK293727 AF033348 AF074247 D82346 NM_004518 NM_172106 NM_172107 NM_172108 NM_172109	-47280	-	X89741 Y08421 AB590558 AK314907 TSC_hg19_v1_chr20_-_61992648 BC096290 BC096291 BC096292 BC096293 L35901 NM_000744 U62433	-158578	-	TSC_hg19_v1_chr20_+_62152117 BC002531 NM_024299 AK024699 AK311318	924	+	TSC_hg19_v1_chr20_-_62168681 AB527573 X78549 AK301691 AK315232 BC035843 NM_005975 AK301364	17495	-	AB527384 NM_080823	27626	-	X70940|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##AK307536|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##NM_001958|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC110409|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BT007043|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##Y15065|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##BC000699|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF110020|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AK293727|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF033348|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF074247|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##D82346|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_004518|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172106|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172107|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172108|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172109|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##X89741|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##Y08421|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##AK314907|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096290|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096291|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096292|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096293|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##L35901|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##NM_000744|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##U62433|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##X78549|PTK6|5753|PTK6 protein tyrosine kinase 6##AK301691|PTK6|5753|PTK6 protein tyrosine kinase 6##AK315232|PTK6|5753|PTK6 protein tyrosine kinase 6##BC035843|PTK6|5753|PTK6 protein tyrosine kinase 6##NM_005975|PTK6|5753|PTK6 protein tyrosine kinase 6##AK301364|PTK6|5753|PTK6 protein tyrosine kinase 6##NM_080823|SRMS|6725|src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites	0.0	
chr2	197105074	197105217	reg1034261.p1	4.148	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-68827	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-68866	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-171650	-	BC117194 BC117198 AB037722 NM_020760	352147	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	399212	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	559268	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.0	
chr5	169705690	169705817	reg1032428.p1	4.148	+	BC030767 NM_001102609 BC092511	-45757	+	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	-172782	+	AK055998 NM_001129891	-298010	-	BT007273 FN432830 DQ890681 DQ893863 AB527802 TSC_hg19_v1_chr5_-_169724688	18898	-	TSC_hg19_v1_chr5_-_169724734 BC016618 AK310369	19002	-	AK292890 TSC_hg19_v1_chr5_-_169724784 AK300000	19045	-	BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##BT007273|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##FN432830|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ890681|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ893863|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK292890|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK300000|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	0.0	
chr8	6884320	6884417	reg1032846.p1	4.148	+	BC093791 BC112188 BC069423 M21130 M23281 BC119706 X52053 BC027917 M26602 NM_005217 X13621 NM_001042500 NM_004084	-8569	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	-27668	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	-46778	-	BC107079 BC069690 NM_021010	29886	-	NM_001164452 NM_001164456	230057	+	NM_001164452 NM_001164456	252923	+	BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M23281|DEFA3|1668|defensin, alpha 3, neutrophil-specific##BC119706|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X52053|DEFA1|1667|defensin, alpha 1##BC027917|DEFA3|1668|defensin, alpha 3, neutrophil-specific##M26602|DEFA1|1667|defensin, alpha 1##NM_005217|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X13621|DEFA3|1668|defensin, alpha 3, neutrophil-specific##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC107079|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC069690|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##NM_021010|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13	0.592711	CTCF.p2:86:0.593
chr10	134388865	134388954	reg1027062.p1	4.147	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	-37597	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-130226	+	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	-178200	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	210597	-	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	367129	-	NM_001083909 TSC_hg19_v1_chr10_+_134901429 AK124728	512548	+	BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40##NM_001083909|GPR123|84435|G protein-coupled receptor 123##AK124728|GPR123|84435|G protein-coupled receptor 123	0.0	
chr3	59466606	59466685	reg1033520.p2	4.147	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-430885	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-430904	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-430937	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	1770445	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	2080566	+	BC047734 TSC_hg19_v1_chr3_+_61547294	2080641	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.0	
chr8	6605920	6606022	reg1033890.p1	4.147	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	-39788	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	-40031	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	-40080	+	AY534243 AY358489 AY534242 NM_207411	87121	-	BC033298 BC047677 X92744 U73945 NM_005218	129512	-	M98331 BC093951 BC093953 BC069667 BC069710 BC069728 BC069769 NM_001926	177614	-	AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AY534243|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY358489|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY534242|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##NM_207411|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##BC033298|DEFB1|1672|defensin, beta 1##BC047677|DEFB1|1672|defensin, beta 1##X92744|DEFB1|1672|defensin, beta 1##U73945|DEFB1|1672|defensin, beta 1##NM_005218|DEFB1|1672|defensin, beta 1##M98331|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093951|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093953|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069667|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069710|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069728|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069769|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##NM_001926|DEFA6|1671|defensin, alpha 6, Paneth cell-specific	0.0	
chr11	128392474	128392573	reg1036294.p2	4.146	+	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	-389	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	-560	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1519218	+	BX640634 NM_001143820	64929	-	TSC_hg19_v1_chr11_+_128563793 NM_001167681 NM_002017	171275	+	TSC_hg19_v1_chr11_+_128563966 AK313370	171438	+	BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001167681|FLI1|2313|Friend leukemia virus integration 1##NM_002017|FLI1|2313|Friend leukemia virus integration 1##AK313370|FLI1|2313|Friend leukemia virus integration 1	0.0	
chr1	117221935	117222084	reg1038462.p1	4.146	+	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	-11626	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	-108332	-	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	-108394	-	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	75098	+	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	230633	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	322396	+	NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule	0.977182	CTCF.p2:21:0.977
chr15	70489451	70489617	reg1020462.p2	4.146	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-99291	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-99307	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-147625	-	TSC_hg19_v1_chr15_-_70878946 BC040579	389410	-	BC016881 AL834243 NM_001008224 AK055435	505093	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	566308	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.0	
chr17	13210025	13210145	reg1033772.p2	4.146	+	TSC_hg19_v1_chr17_-_12921332 AK001392 NM_001165962 NM_018127 NM_173717	-288729	-	TSC_hg19_v1_chr17_-_12921325 AK298397 AK094687 BC001939 BC004158	-288766	-	TSC_hg19_v1_chr17_-_12921295 AK300011 AF304370 CR457261 CU674942	-288809	-	AY358838 TSC_hg19_v1_chr17_-_13505228 AF105376 NM_006042 AK292047	295152	-	TSC_hg19_v1_chr17_-_13972756 AK123100	762677	-	NM_001303 TSC_hg19_v1_chr17_+_13972839 AK312718	762694	+	AK001392|ELAC2|60528|elaC homolog 2 (E. coli)##NM_001165962|ELAC2|60528|elaC homolog 2 (E. coli)##NM_018127|ELAC2|60528|elaC homolog 2 (E. coli)##NM_173717|ELAC2|60528|elaC homolog 2 (E. coli)##AK298397|ELAC2|60528|elaC homolog 2 (E. coli)##AK094687|ELAC2|60528|elaC homolog 2 (E. coli)##BC001939|ELAC2|60528|elaC homolog 2 (E. coli)##BC004158|ELAC2|60528|elaC homolog 2 (E. coli)##AK300011|ELAC2|60528|elaC homolog 2 (E. coli)##AF304370|ELAC2|60528|elaC homolog 2 (E. coli)##CR457261|ELAC2|60528|elaC homolog 2 (E. coli)##AY358838|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AF105376|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_006042|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##AK292047|HS3ST3A1|9955|heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1##NM_001303|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK312718|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)	0.904982	CTCF.p2:-11:0.905
chr19	48610913	48611047	reg1001710.p2	4.146	+	HQ258076 BC126133 BC126135 AF169159 NM_019855	-63735	-	AF279147 NM_022142 BC015598	-113055	+	AB590993 DQ227497 NM_001128326	-115598	-	AF058921 BC017956 AK022440 TSC_hg19_v1_chr19_-_48614075 AF065214 BC063416 AK314524 AK295400 NM_001159322 NM_001159323 NM_003706	3080	-	M36067 NM_000234 TSC_hg19_v1_chr19_-_48673602 AK314210 AK297296 AK303644 AB208791 AK225863 AK300370	62601	-	TSC_hg19_v1_chr19_+_48673949 BC043386	62973	+	HQ258076|CABP5|56344|calcium binding protein 5##BC126133|CABP5|56344|calcium binding protein 5##BC126135|CABP5|56344|calcium binding protein 5##AF169159|CABP5|56344|calcium binding protein 5##NM_019855|CABP5|56344|calcium binding protein 5##AF279147|ELSPBP1|64100|epididymal sperm binding protein 1##NM_022142|ELSPBP1|64100|epididymal sperm binding protein 1##BC015598|ELSPBP1|64100|epididymal sperm binding protein 1##DQ227497|BSPH1|100131137|binder of sperm protein homolog 1##NM_001128326|BSPH1|100131137|binder of sperm protein homolog 1##AF058921|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC017956|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK022440|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AF065214|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC063416|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK314524|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK295400|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159322|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159323|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_003706|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##M36067|LIG1|3978|ligase I, DNA, ATP-dependent##NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent##AK314210|LIG1|3978|ligase I, DNA, ATP-dependent##AK297296|LIG1|3978|ligase I, DNA, ATP-dependent##AK303644|LIG1|3978|ligase I, DNA, ATP-dependent##AB208791|LIG1|3978|ligase I, DNA, ATP-dependent##AK225863|LIG1|3978|ligase I, DNA, ATP-dependent##AK300370|LIG1|3978|ligase I, DNA, ATP-dependent##BC043386|C19orf68|374920|chromosome 19 open reading frame 68	0.047734	
chr2	120986268	120986380	reg1034668.p1	4.146	+	TSC_hg19_v1_chr2_-_120980977 AF530474 NM_024121	-5326	-	TSC_hg19_v1_chr2_-_120980957 BC016849 AK289880 BC080607 AK024632	-5387	-	TSC_hg19_v1_chr2_+_120770652 AK023019 BC054508 AK290895 BC032822 NM_001184938	-215591	+	NM_002881 TSC_hg19_v1_chr2_+_121010418	24096	+	AK127675 AK304588 TSC_hg19_v1_chr2_+_121010450 M35416	24120	+	TSC_hg19_v1_chr2_+_121010498 BC018163	24180	+	AF530474|TMEM185B|79134|transmembrane protein 185B##NM_024121|TMEM185B|79134|transmembrane protein 185B##BC016849|TMEM185B|79134|transmembrane protein 185B##BC080607|TMEM185B|79134|transmembrane protein 185B##AK024632|TMEM185B|79134|transmembrane protein 185B##AK023019|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC054508|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK290895|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC032822|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184938|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_002881|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK127675|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK304588|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##M35416|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)	0.692586	CTCF.p2:-32:0.693
chr2	240961082	240961182	reg1028945.p1	4.146	+	TSC_hg19_v1_chr2_-_240323341 AK308791	-637784	-	TSC_hg19_v1_chr2_-_240322695 BC039904	-638434	-	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	-638484	-	AF453834 TSC_hg19_v1_chr2_-_240964750 CU678462 DQ891011 DQ894191 BC031332 AF087661 AB209440 AK290778 BC003417 AF087854	3629	-	TSC_hg19_v1_chr2_-_240964807 NM_004544	3680	-	NM_001005853 BC137561 BC137562	8743	-	AK308791|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##AF453834|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ891011|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ894191|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC031332|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087661|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AB209440|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AK290778|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC003417|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087854|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_004544|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_001005853|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137561|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137562|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2	0.22687	CTCF.p2:-27:0.227
chr3	3212804	3212930	reg1037268.p1	4.146	+	NM_182916 TSC_hg19_v1_chr3_+_3168634 AK290411 BC005184 AL834397 BC012537 AB063105 AF151805 AK124137	-44216	+	AK304256 NM_000564 NM_001243099 NM_175724 NM_175725 NM_175726 NM_175727 NM_175728	-60810	-	NM_001206956 NM_175613 AK057278 AK314396 BC026119	-278958	+	TSC_hg19_v1_chr3_-_3221376 AF117230 CU675978 CU688352 AK058191 BC059171 CR627060 AK027507 AK312577 BC017419 BC067811	8505	-	TSC_hg19_v1_chr3_-_3221386 AK301423	8519	-	TSC_hg19_v1_chr3_-_3221401 NM_001173482 NM_016302	8534	-	NM_182916|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AK290411|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC005184|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AL834397|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC012537|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AB063105|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AF151805|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AK304256|IL5RA|3568|interleukin 5 receptor, alpha##NM_000564|IL5RA|3568|interleukin 5 receptor, alpha##NM_001243099|IL5RA|3568|interleukin 5 receptor, alpha##NM_175724|IL5RA|3568|interleukin 5 receptor, alpha##NM_175725|IL5RA|3568|interleukin 5 receptor, alpha##NM_175726|IL5RA|3568|interleukin 5 receptor, alpha##NM_175727|IL5RA|3568|interleukin 5 receptor, alpha##NM_175728|IL5RA|3568|interleukin 5 receptor, alpha##NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4##AF117230|CRBN|51185|cereblon##AK058191|CRBN|51185|cereblon##BC059171|CRBN|51185|cereblon##CR627060|CRBN|51185|cereblon##AK027507|CRBN|51185|cereblon##AK312577|CRBN|51185|cereblon##BC017419|CRBN|51185|cereblon##BC067811|CRBN|51185|cereblon##AK301423|CRBN|51185|cereblon##NM_001173482|CRBN|51185|cereblon##NM_016302|CRBN|51185|cereblon	0.994171	CTCF.p2:-6:0.994
chr5	176264748	176264921	reg1035729.p1	4.146	+	TSC_hg19_v1_chr5_+_176237521 AK131380 NM_133369 BC157824	-27279	+	TSC_hg19_v1_chr5_+_176074497 AK024427 BC067105 BC010405 AF174603 CU679699 CU688248	-190282	+	NM_001006616 NM_012171 NM_130465 TSC_hg19_v1_chr5_+_176074470 AY037146	-190404	+	U51333 BC028129 NM_002115	61489	-	AK304794 BX537376 NM_016290 AK023044 BC032561 BC006078 BC014069 AF349313 NM_001199297 NM_001199298 TSC_hg19_v1_chr5_-_176433806	168754	-	AK297448 AK297584 NM_012279 TSC_hg19_v1_chr5_+_176449708 AK295549 AF083340 AK026627 AK300065 BC007775 AL359576 CR749692 AK131469 AK300738 AB463365 AM392799 AM393768	184885	+	AK131380|UNC5A|90249|unc-5 homolog A (C. elegans)##NM_133369|UNC5A|90249|unc-5 homolog A (C. elegans)##BC157824|UNC5A|90249|unc-5 homolog A (C. elegans)##AK024427|TSPAN17|26262|tetraspanin 17##BC067105|TSPAN17|26262|tetraspanin 17##BC010405|TSPAN17|26262|tetraspanin 17##AF174603|TSPAN17|26262|tetraspanin 17##NM_001006616|TSPAN17|26262|tetraspanin 17##NM_012171|TSPAN17|26262|tetraspanin 17##NM_130465|TSPAN17|26262|tetraspanin 17##AY037146|TSPAN17|26262|tetraspanin 17##U51333|HK3|3101|hexokinase 3 (white cell)##BC028129|HK3|3101|hexokinase 3 (white cell)##NM_002115|HK3|3101|hexokinase 3 (white cell)##AK304794|UIMC1|51720|ubiquitin interaction motif containing 1##BX537376|UIMC1|51720|ubiquitin interaction motif containing 1##NM_016290|UIMC1|51720|ubiquitin interaction motif containing 1##AK023044|UIMC1|51720|ubiquitin interaction motif containing 1##BC032561|UIMC1|51720|ubiquitin interaction motif containing 1##BC006078|UIMC1|51720|ubiquitin interaction motif containing 1##AF349313|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199297|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199298|UIMC1|51720|ubiquitin interaction motif containing 1##AK297448|ZNF346|23567|zinc finger protein 346##NM_012279|ZNF346|23567|zinc finger protein 346##AK295549|ZNF346|23567|zinc finger protein 346##AF083340|ZNF346|23567|zinc finger protein 346##AK026627|ZNF346|23567|zinc finger protein 346##AK300065|ZNF346|23567|zinc finger protein 346##BC007775|ZNF346|23567|zinc finger protein 346##AL359576|ZNF346|23567|zinc finger protein 346##CR749692|ZNF346|23567|zinc finger protein 346##AK131469|ZNF346|23567|zinc finger protein 346##AK300738|ZNF346|23567|zinc finger protein 346##AM392799|ZNF346|23567|zinc finger protein 346##AM393768|ZNF346|23567|zinc finger protein 346	0.0	
chr5	76032945	76033125	reg1034768.p1	4.146	+	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	-21079	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	-113890	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	-333919	+	NM_005242 BC018130 TSC_hg19_v1_chr5_+_76114854 U34038	81817	+	TSC_hg19_v1_chr5_+_76114883 BC012453 AY336105 BT009856 CU676194 CU680330 DQ890966 DQ894139	81909	+	BC022320 NM_130772	112790	+	AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_005242|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC018130|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##U34038|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC012453|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##AY336105|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BT009856|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ890966|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ894139|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC022320|S100Z|170591|S100 calcium binding protein Z##NM_130772|S100Z|170591|S100 calcium binding protein Z	0.0	
chr8	11058313	11058419	reg1033209.p1	4.146	+	TSC_hg19_v1_chr8_-_10697386 AF205718 AF418553 AJ344104	-360957	-	AY238941 AY523566 BC093762 BC143382 NM_017884 TSC_hg19_v1_chr8_-_10697379 AY029161 AK313715 BC015479 AK296724	-361032	-	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	-470382	-	AJ301560 TSC_hg19_v1_chr8_-_11058857 AY534244 NM_173683	499	-	TSC_hg19_v1_chr8_+_11141999 BC034990 NM_015458	83646	+	TSC_hg19_v1_chr8_+_11142324 AJ297823 AK000444 AK223525 AK303543 BX538176 BC093788 BC101623 BC022003 AB528741 DQ893969 EU176196	83989	+	AF205718|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AF418553|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ344104|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY238941|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AY523566|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC093762|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC143382|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##NM_017884|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AK313715|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##BC015479|PINX1|54984|PIN2/TERF1 interacting, telomerase inhibitor 1##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7##AJ301560|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##AY534244|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##NM_173683|XKR6|286046|XK, Kell blood group complex subunit-related family, member 6##BC034990|MTMR9|66036|myotubularin related protein 9##NM_015458|MTMR9|66036|myotubularin related protein 9##AJ297823|MTMR9|66036|myotubularin related protein 9##AK000444|MTMR9|66036|myotubularin related protein 9##AK223525|MTMR9|66036|myotubularin related protein 9##AK303543|MTMR9|66036|myotubularin related protein 9##BX538176|MTMR9|66036|myotubularin related protein 9##BC093788|MTMR9|66036|myotubularin related protein 9##BC101623|MTMR9|66036|myotubularin related protein 9##BC022003|MTMR9|66036|myotubularin related protein 9##DQ893969|MTMR9|66036|myotubularin related protein 9##EU176196|MTMR9|66036|myotubularin related protein 9	0.0	
chr1	205304766	205304832	reg1007073.p1	4.145	+	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	-13956	-	AY358192 TSC_hg19_v1_chr1_+_205236667	-68165	+	AK293734 NM_001242925	-106741	+	BC036076 TSC_hg19_v1_chr1_-_205313311	8511	-	AK299227 AK001610 NM_018203 AK096590	21241	-	AB084764 AB084765 AB085610 AB096677 AB096678 AB096679 AB096680 AB096681 AB096682 BC036636 AK302392 NM_001001552 NM_001199050 NM_001199051 NM_001199052	86397	-	AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK293734|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_001242925|TMCC2|9911|transmembrane and coiled-coil domain family 2##BC036076|KLHDC8A|55220|kelch domain containing 8A##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A##AB084764|LEMD1|93273|LEM domain containing 1##AB084765|LEMD1|93273|LEM domain containing 1##AB085610|LEMD1|93273|LEM domain containing 1##AB096677|LEMD1|93273|LEM domain containing 1##AB096678|LEMD1|93273|LEM domain containing 1##AB096679|LEMD1|93273|LEM domain containing 1##AB096680|LEMD1|93273|LEM domain containing 1##AB096681|LEMD1|93273|LEM domain containing 1##AB096682|LEMD1|93273|LEM domain containing 1##BC036636|LEMD1|93273|LEM domain containing 1##AK302392|LEMD1|93273|LEM domain containing 1##NM_001001552|LEMD1|93273|LEM domain containing 1##NM_001199050|LEMD1|93273|LEM domain containing 1##NM_001199051|LEMD1|93273|LEM domain containing 1##NM_001199052|LEMD1|93273|LEM domain containing 1	0.963882	
chr1	248867081	248867226	reg1031271.p1	4.145	+	NM_001004734 BC137188 BC137189	-21537	-	NM_001001824	-52969	-	NM_001001827 AB528813	-64594	-	AY358453 TSC_hg19_v1_chr1_-_249120082 AK056382 NM_030645	252955	-	TSC_hg19_v1_chr1_+_249132449 BC029310	265304	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	265392	+	NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##NM_001001824|OR2T27|403239|olfactory receptor, family 2, subfamily T, member 27##NM_001001827|OR2T35|403244|olfactory receptor, family 2, subfamily T, member 35##AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like##AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like##BC029310|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672	0.876685	CTCF.p2:-9:0.877
chr17	52250184	52250279	reg1031459.p2	4.145	+	NM_032559 AK057272 AF333335 BC033802 AK302262 AK308265 CU689754	-349916	+	NM_001243552	-1187352	+	BC029865 TSC_hg19_v1_chr17_-_50237384 AF288385 NM_001082534	-2012868	-	TSC_hg19_v1_chr17_+_52978217 NM_005486 AK001893 AK309164 AK225351 AJ010071 AK303912 AK300823 AK303913 AK315039 AK315907 AK223125 BC029396 AB590855	727925	+	TSC_hg19_v1_chr17_-_53046016 AK293851 CR541837 DQ893136 DQ896418 AF044321 BC005895 AK295381 NM_001162861 NM_001162862 NM_004375	795786	-	TSC_hg19_v1_chr17_+_53046125 AK122865 NM_178509 BC125116 BC041485	795896	+	NM_032559|KIF2B|84643|kinesin family member 2B##AK057272|KIF2B|84643|kinesin family member 2B##AF333335|KIF2B|84643|kinesin family member 2B##BC033802|KIF2B|84643|kinesin family member 2B##AK302262|KIF2B|84643|kinesin family member 2B##NM_001243552|LOC100506650|100506650|uncharacterized LOC100506650##BC029865|CA10|56934|carbonic anhydrase X##AF288385|CA10|56934|carbonic anhydrase X##NM_001082534|CA10|56934|carbonic anhydrase X##NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1##AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1##AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1##AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1##AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1##AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1##AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1##BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1##AK293851|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##CR541837|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##DQ893136|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##DQ896418|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AF044321|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##BC005895|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AK295381|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_001162861|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_001162862|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_004375|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AK122865|STXBP4|252983|syntaxin binding protein 4##NM_178509|STXBP4|252983|syntaxin binding protein 4##BC125116|STXBP4|252983|syntaxin binding protein 4##BC041485|STXBP4|252983|syntaxin binding protein 4	0.807818	CTCF.p2:10:0.808
chr20	37504169	37504309	reg1032150.p1	4.145	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	-69885	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	-127127	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-151080	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	50750	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	50829	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	86750	+	AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35	0.0	
chr4	38676510	38676690	reg1000416.p1	4.145	+	AF289565 TSC_hg19_v1_chr4_-_38666549	-10111	-	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	-10774	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-697583	+	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	107999	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	129819	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	181828	-	AF289565|FLJ13197|79667|uncharacterized FLJ13197##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6	0.0	
chr9	136328378	136328495	reg1028807.p1	4.145	+	NM_001135775 NM_001242369 NM_001242370 NM_017586 AK075416 TSC_hg19_v1_chr9_+_136325120 AK304524 AK074852 AK311325 AK296343 AK075548 BC030558 AJ011373 AY358452 AK298820 CU688906	-3297	+	TSC_hg19_v1_chr9_+_136293730 AJ011374	-34696	+	AJ305314 AJ420810 AJ420811 BC103828 BC103829 BC103830 AY055376 TSC_hg19_v1_chr9_+_136287508 AF414401	-40959	+	DQ891513 DQ894704 AK294974 BC013740 TSC_hg19_v1_chr9_-_136344222 AJ011372 AK225106 AK222919 AK074836 AK096630 Y17803 AK074927 NM_001145099 NM_017585	15792	-	NM_001080483	61631	-	AB011177 NM_001145320	68849	+	NM_001135775|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242369|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242370|C9orf7|11094|chromosome 9 open reading frame 7##NM_017586|C9orf7|11094|chromosome 9 open reading frame 7##AK075416|C9orf7|11094|chromosome 9 open reading frame 7##AK304524|C9orf7|11094|chromosome 9 open reading frame 7##AK074852|C9orf7|11094|chromosome 9 open reading frame 7##AK311325|C9orf7|11094|chromosome 9 open reading frame 7##AK296343|C9orf7|11094|chromosome 9 open reading frame 7##AK075548|C9orf7|11094|chromosome 9 open reading frame 7##BC030558|C9orf7|11094|chromosome 9 open reading frame 7##AJ011373|C9orf7|11094|chromosome 9 open reading frame 7##AY358452|C9orf7|11094|chromosome 9 open reading frame 7##AK298820|C9orf7|11094|chromosome 9 open reading frame 7##AJ011374|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ305314|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ420810|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ420811|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103828|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103829|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103830|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AY055376|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AF414401|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001080483|TMEM8C|389827|transmembrane protein 8C##AB011177|ADAMTSL2|9719|ADAMTS-like 2##NM_001145320|ADAMTSL2|9719|ADAMTS-like 2	0.051448	
chr11	64641937	64642117	reg1036324.p1	4.144	+	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	-29938	-	AJ297488 AJ297489 NM_130803 NM_130804	-63262	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	-63833	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	3955	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	4127	-	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	5134	-	AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I##AY007161|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1	0.0	
chr1	28655514	28655600	reg1034001.p2	4.144	+	NM_001127350 NM_017638 AK296130 AK000052 AB107222 BC002694 TSC_hg19_v1_chr1_+_28655576	-10	+	TSC_hg19_v1_chr1_+_28586034 NM_031459 BC013304 AY123223 BC033719 AL136551 AK315710 DQ892827 DQ896073 EU831582 EU831667 AB529110 CU680558	-69399	+	TSC_hg19_v1_chr1_+_28562634 NM_016311 NM_178190 NM_178191 AK316600 BC009677 AK000934 AB029042 BT009849 CR457097 EU832478 EU832558 BC017562 BC004955	-92908	+	TSC_hg19_v1_chr1_+_28696251 NM_001048183 CR749449 AK025436 BC029266 BC016152 BC068508	40668	+	NM_023923 BC021247	109113	+	NM_001048199 TSC_hg19_v1_chr1_+_28832500	176941	+	NM_001127350|MED18|54797|mediator complex subunit 18##NM_017638|MED18|54797|mediator complex subunit 18##AK296130|MED18|54797|mediator complex subunit 18##AK000052|MED18|54797|mediator complex subunit 18##AB107222|MED18|54797|mediator complex subunit 18##BC002694|MED18|54797|mediator complex subunit 18##NM_031459|SESN2|83667|sestrin 2##BC013304|SESN2|83667|sestrin 2##AY123223|SESN2|83667|sestrin 2##BC033719|SESN2|83667|sestrin 2##AL136551|SESN2|83667|sestrin 2##AK315710|SESN2|83667|sestrin 2##DQ892827|SESN2|83667|sestrin 2##DQ896073|SESN2|83667|sestrin 2##EU831582|SESN2|83667|sestrin 2##EU831667|SESN2|83667|sestrin 2##NM_016311|ATPIF1|93974|ATPase inhibitory factor 1##NM_178190|ATPIF1|93974|ATPase inhibitory factor 1##NM_178191|ATPIF1|93974|ATPase inhibitory factor 1##AK316600|ATPIF1|93974|ATPase inhibitory factor 1##BC009677|ATPIF1|93974|ATPase inhibitory factor 1##AK000934|ATPIF1|93974|ATPase inhibitory factor 1##AB029042|ATPIF1|93974|ATPase inhibitory factor 1##BT009849|ATPIF1|93974|ATPase inhibitory factor 1##CR457097|ATPIF1|93974|ATPase inhibitory factor 1##EU832478|ATPIF1|93974|ATPase inhibitory factor 1##EU832558|ATPIF1|93974|ATPase inhibitory factor 1##BC017562|ATPIF1|93974|ATPase inhibitory factor 1##BC004955|ATPIF1|93974|ATPase inhibitory factor 1##NM_001048183|PHACTR4|65979|phosphatase and actin regulator 4##CR749449|PHACTR4|65979|phosphatase and actin regulator 4##AK025436|PHACTR4|65979|phosphatase and actin regulator 4##BC029266|PHACTR4|65979|phosphatase and actin regulator 4##BC016152|PHACTR4|65979|phosphatase and actin regulator 4##BC068508|PHACTR4|65979|phosphatase and actin regulator 4##NM_023923|PHACTR4|65979|phosphatase and actin regulator 4##BC021247|PHACTR4|65979|phosphatase and actin regulator 4##NM_001048199|RCC1|1104|regulator of chromosome condensation 1	0.0	
chr14	95827518	95827698	reg1010238.p1	4.144	+	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	-41425	-	TSC_hg19_v1_chr14_+_95624023 BC040596	-203587	+	TSC_hg19_v1_chr14_-_95623867 BC046934 AB023145 BC150287 NM_177438	-203816	-	AK131436 BC146604 BX248076 NM_152592	114496	-	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	173407	-	TSC_hg19_v1_chr14_+_96001352 NM_016417	173718	+	AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC046934|DICER1|23405|dicer 1, ribonuclease type III##AB023145|DICER1|23405|dicer 1, ribonuclease type III##BC150287|DICER1|23405|dicer 1, ribonuclease type III##NM_177438|DICER1|23405|dicer 1, ribonuclease type III##AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##NM_016417|GLRX5|51218|glutaredoxin 5	0.0	
chr17	78806735	78806872	reg1031726.p1	4.144	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-287985	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-288154	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-356476	-	TSC_hg19_v1_chr17_+_78935064 BC073898	128329	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	158838	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	158891	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.0	
chr9	36248194	36248307	reg1032997.p1	4.144	+	TSC_hg19_v1_chr9_+_36191041 AB463527 CU676418 BT007170 DQ270158	-57210	+	TSC_hg19_v1_chr9_+_36190960 AK225153 BC019287 M20472 M20471	-57278	+	AK295692 TSC_hg19_v1_chr9_+_36190928 BC009201	-57319	+	TSC_hg19_v1_chr9_-_36258446 BC121179 AK295562 NM_001190383 NM_001190384 NM_005476	10189	-	AM697709 AM697708 AK296687 AK312539 NM_001128227 NM_001190388	28741	-	TSC_hg19_v1_chr9_-_36375965 AK024996 DQ895235 EU176239	127750	-	BT007170|CLTA|1211|clathrin, light chain A##DQ270158|CLTA|1211|clathrin, light chain A##AK225153|CLTA|1211|clathrin, light chain A##BC019287|CLTA|1211|clathrin, light chain A##M20472|CLTA|1211|clathrin, light chain A##M20471|CLTA|1211|clathrin, light chain A##AK295692|CLTA|1211|clathrin, light chain A##BC009201|CLTA|1211|clathrin, light chain A##BC121179|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##AK295562|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##NM_001190383|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##NM_001190384|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##NM_005476|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##AM697709|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##AM697708|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##AK296687|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##AK312539|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##NM_001128227|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##NM_001190388|GNE|10020|glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase##AK024996|RNF38|152006|ring finger protein 38##DQ895235|RNF38|152006|ring finger protein 38##EU176239|RNF38|152006|ring finger protein 38	0.418374	CTCF.p2:-14:0.418
chr12	112732808	112732898	reg1032302.p2	4.143	+	TSC_hg19_v1_chr12_-_112630525 AF174498	-102325	-	TSC_hg19_v1_chr12_+_112563363 AK122620 AK291331 AK295474 AB007447	-169462	+	TSC_hg19_v1_chr12_+_112563341 AK309916 AK312601 NM_001143906 NM_006700	-169531	+	TSC_hg19_v1_chr12_-_112819755 NM_001109662	86972	-	TSC_hg19_v1_chr12_-_112847411 BC022444 X69391 BC004138 BC104824 BC104826 AK308680 NM_000970 NM_001024662	114552	-	NM_002834 TSC_hg19_v1_chr12_+_112856698	123763	+	AF174498|C12orf51|283450|chromosome 12 open reading frame 51##AK122620|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK291331|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK295474|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AB007447|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK309916|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK312601|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_001143906|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_006700|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_001109662|C12orf51|283450|chromosome 12 open reading frame 51##BC022444|RPL6|6128|ribosomal protein L6##X69391|RPL6|6128|ribosomal protein L6##BC004138|RPL6|6128|ribosomal protein L6##BC104824|RPL6|6128|ribosomal protein L6##BC104826|RPL6|6128|ribosomal protein L6##NM_000970|RPL6|6128|ribosomal protein L6##NM_001024662|RPL6|6128|ribosomal protein L6##NM_002834|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11	0.051628	
chr1	40264989	40265169	reg1005266.p1	4.143	+	TSC_hg19_v1_chr1_-_40254528 AY303955 NM_001720	-10553	-	TSC_hg19_v1_chr1_-_40254516 BC108678	-10564	-	BC023526 TSC_hg19_v1_chr1_-_40254233	-10890	-	AY702933 AY702934 AY702935 AY702936 AY702937 AY702938 AY702939 AY702940 AY702941 AY702942 AY702943 AY702944 AY702945 AY702946 AY702947 TSC_hg19_v1_chr1_-_40349138 AY052768 BC010741	84045	-	AK296453 AK307910 TSC_hg19_v1_chr1_-_40349167	84088	-	TSC_hg19_v1_chr1_-_40349179 AK223478 AK304759 AY303390 BC128155 BC128156 NM_017646 BC107569	84095	-	AY303955|BMP8B|656|bone morphogenetic protein 8b##NM_001720|BMP8B|656|bone morphogenetic protein 8b##BC108678|BMP8B|656|bone morphogenetic protein 8b##BC023526|BMP8B|656|bone morphogenetic protein 8b##AY702933|TRIT1|54802|tRNA isopentenyltransferase 1##AY702934|TRIT1|54802|tRNA isopentenyltransferase 1##AY702935|TRIT1|54802|tRNA isopentenyltransferase 1##AY702936|TRIT1|54802|tRNA isopentenyltransferase 1##AY702937|TRIT1|54802|tRNA isopentenyltransferase 1##AY702938|TRIT1|54802|tRNA isopentenyltransferase 1##AY702939|TRIT1|54802|tRNA isopentenyltransferase 1##AY702940|TRIT1|54802|tRNA isopentenyltransferase 1##AY702941|TRIT1|54802|tRNA isopentenyltransferase 1##AY702942|TRIT1|54802|tRNA isopentenyltransferase 1##AY702943|TRIT1|54802|tRNA isopentenyltransferase 1##AY702944|TRIT1|54802|tRNA isopentenyltransferase 1##AY702945|TRIT1|54802|tRNA isopentenyltransferase 1##AY702946|TRIT1|54802|tRNA isopentenyltransferase 1##AY702947|TRIT1|54802|tRNA isopentenyltransferase 1##AY052768|TRIT1|54802|tRNA isopentenyltransferase 1##BC010741|TRIT1|54802|tRNA isopentenyltransferase 1##AK296453|TRIT1|54802|tRNA isopentenyltransferase 1##AK307910|TRIT1|54802|tRNA isopentenyltransferase 1##AK223478|TRIT1|54802|tRNA isopentenyltransferase 1##AK304759|TRIT1|54802|tRNA isopentenyltransferase 1##AY303390|TRIT1|54802|tRNA isopentenyltransferase 1##BC128155|TRIT1|54802|tRNA isopentenyltransferase 1##BC128156|TRIT1|54802|tRNA isopentenyltransferase 1##NM_017646|TRIT1|54802|tRNA isopentenyltransferase 1##BC107569|TRIT1|54802|tRNA isopentenyltransferase 1	0.0	
chr14	107163940	107164072	reg1030520.p1	4.143	+	GQ232991 EU814957 AY003867 GQ233006 AY003724 AY003757 FJ840009 GU552709 AY003791 FJ840366 JF810271 FJ840139 FJ874031 AF017464 HM774748 HM775002 HQ704029 DQ524134 DQ840815 DQ840856 AY530312 AY941926 AY986399 DQ100849 AB067106 AB363089 DQ535377 U00563 U64502 AY392909 AY393069 AY393070 AF062111 AF062168 X81739 X81750 Z14221 TSC_hg19_v1_chr14_-_107131555 AK097017 AK128476 AK130433	-32617	-	AF103081 JN110643 JN110687 GQ504895 GQ504960 HM774028 HM774358 HM774582 HM774889 X98961 AF165107 AY423163 AF485471 AF485473 AJ306675 AY423172 FN563800 EF633801 HM994977 HM994995 HM995120 HM995247 HM995290 HM995392 HM995519 HM995754 HM995991 HM996039 HM996369 AY866776 DQ322973 DQ926438 AF471404 AJ245345 AJ401162 AM279604 AY866777 DQ100932 DQ100975 DQ926053 DQ926476 GU570357 L19914 Z96976 AB067024 AB067127 AB363182 AB373619 AF231404 AF471217 AF471316 AF471319 AF471331 AF471353 AJ519231 AJ556646 AJ556650 AY640562 AY866705 AY866733 AY971141 DQ065617 DQ065721 DQ100842 DQ535272 DQ535332 DQ926279 EF633803 EF633809 EF633824 EF633825 FJ385293 FJ492933 FN563769 FN563801 FN563814 FN563817 FN563830 FN563831 L38018 Y08405 Y08406 Z96975 Z98724 AJ519258 AJ519228 AJ519314 AJ519323 AJ519243 AJ519280 AJ519310 AJ519335 AJ519268 AJ519313 X62126 TSC_hg19_v1_chr14_-_107122620	-41517	-	DQ454926 GU552751 DQ523845 DQ454743 DQ454741 FJ873884 FJ873949 FJ874082 DQ454745 AY003790 EU350425 EU667608 EF407835 DQ454756 DQ454758 DQ322814 AF343367 AF343413 AF103266 AJ007443 AF103288 FJ385341 AF103034 AF103338 AF062236 JN110970 L03820 HM774324 HM774398 HM774726 HM774904 HM774928 L33041 HM775043 AF408742 AF485449 AF078936 AF485451 AF485453 AF485455 EF633815 DQ524036 DQ524153 DQ926062 HM995709 HM995710 HM995711 HM995712 HM995713 HM995863 HM995864 HM995866 DQ322813 HM996268 AJ245306 AY044149 DQ100802 DQ100910 DQ926129 AB063797 AB063898 AB063899 AF022008 AF099199 AF398961 AF471517 AF471518 AF471519 AF471520 AJ224899 AJ399811 AY554175 AY640527 DQ065678 DQ535356 DQ779565 DQ779566 FJ385288 FN563805 FN563806 FN563810 FN563812 FN563827 FN563828 HQ689733 JF806286 X77017 L48239 AY392926 AY393064 AY452138 X65898 X81752 X81753 BC073782 AF067420 TSC_hg19_v1_chr14_-_107114275 AK097071	-49897	-	AY179836 AY179838 AY179841 AY179844 AY179846 AY179847 AY179848 AY179850 AY179854 AY179855 AY179856 AY179858 AY179860 AY003797 DQ454801 EF583677 EU099154 EU099192 AY003810 DQ454853 AY003779 DQ454620 DQ523910 GU552683 AY003802 AY003865 DQ454802 DQ454808 DQ454937 GU552691 GU552774 HM773974 FJ873961 EF441761 DQ454821 AY996332 FJ840044 FJ840053 FJ840143 FJ840193 FJ840194 FJ840196 FJ840204 FJ840239 FJ873866 FJ873869 FJ873895 FJ873936 FJ874043 GQ232929 HM116184 EF583683 EF175392 EU099153 GQ232967 GU358675 EF583681 EU099116 GU358674 JF810254 EF091907 EF175405 EU667599 EF091906 EF091908 EF091909 EF091910 EF175388 EF175390 EF175395 EF175406 EF175412 EF175417 EF175418 EF175420 EF175428 EF407848 EF441755 EU099106 EU350411 EU350412 EU433866 EU433872 EU433873 EU433879 EU667594 EU667595 EU667596 EU667597 EU667598 EU814958 EU814959 EU814960 EU814963 EU814966 FJ694873 FJ694874 GQ232838 GQ232965 GU358670 GU358676 GU358678 GU358682 JF810255 JF810274 AF103216 EF175425 EF583662 EF583663 EF583664 EF583665 EF583667 EF583673 EF583674 EF583675 EF583682 EU350410 M35478 EF407834 EF566907 EF407828 EF407830 EF583660 DQ100847 AY998726 AF209884 AJ007325 EF473862 EU099204 U86786 U86795 U86797 AF308545 AF308549 AF308553 AF308554 AF308559 AF308560 AF308561 EU090245 GQ903485 GQ903489 GQ903492 EU099120 GQ903503 AJ239384 EU099100 EU099208 Z80841 AF103052 AF103307 EU099086 EU099105 EU099142 EU099250 EU099176 EU099293 HM774304 AY515008 EU099141 EU099212 JN110763 JN110845 JN110914 JN111163 L04334 L04335 L04344 FJ385405 FJ385410 FJ385424 FJ385430 FJ385431 HM774065 HM774083 HM774091 HM774102 HM774365 HM774646 HM774653 HM774656 HM774681 HM774757 HM774769 HM774771 HM774786 HM774863 HM774965 HM775047 AF103339 AY515006 DQ523992 EU099090 EU099092 EU099115 EU099162 EU099179 EU099210 EU099218 EU099282 DQ097895 EF624069 EF624074 EF624075 EF624077 EF624128 EF624129 EF624130 EF624131 EF624138 EF624140 EF624141 EF624143 EF624174 EF624175 EF624176 EF624177 EF624179 EF624180 EF624182 EF624183 EF624184 EF624185 EF624186 EF624187 EF624188 EF624189 EF624190 EF624191 EF624192 EF624193 EU099060 EU099066 EU099128 EU099129 EU099145 EU099158 EU099160 EU099161 EU099165 EU099177 EU099178 EU099180 EU099247 EU146320 EU146330 EU146331 EU146336 EU146348 EU146349 EU146350 EU146351 EU146352 EU146353 EU146354 EU146355 EU146356 EU146357 EU146359 EU146383 EU146385 EU146386 M98324 AY393263 AY393515 DQ524120 EU090241 EU099081 EU099095 EU099099 EU099103 EU099111 EU099121 EU099135 EU099136 EU099164 EU099170 EU099174 EU099189 EU099205 EU099207 EU099209 EU099220 AF306353 AJ132852 AM259138 L12098 AF035025 AY392856 AY392858 AY393000 AY393010 AY393106 AY393123 AY393128 AY393133 AY393135 AY393137 AY393138 AY393233 AY393338 AY393342 AY393350 AY393373 AY393495 AY393496 AY393501 AY393503 AY393504 AY393508 AY393513 AY393514 AY393516 AY393517 AY393518 AY393519 AY393520 AY393522 AY393523 AY393525 AY393528 AY393532 AY393535 AY393538 AY393539 AY393540 AY393541 AY393542 AY393543 AY393544 AY393545 AY393546 AY393604 AY393611 AY393682 DQ100913 EU099069 EU099072 EU099083 EU099117 EU099138 EU099167 EU099168 EU099171 EU099175 EU099188 EU099198 EU099201 EU099202 EU099211 EU099219 EU099236 HM994945 AY574947 AY093586 AY093587 DQ100805 DQ100924 JN158773 AY093585 AF035785 AF098366 AY781822 DQ100688 DQ523989 HM995306 U00502 DQ100709 DQ100908 DQ523957 DQ524013 DQ524031 DQ524041 DQ524127 HM994992 HM994994 HM994997 HM994998 HM995013 HM995114 HM995174 HM995178 HM995180 HM995227 HM995241 HM995248 HM995283 HM995304 HM995307 HM995375 HM995447 HM995450 HM995512 HM995517 HM995520 HM995558 HM995678 HM995679 HM995680 HM995681 HM995682 HM995683 HM995684 HM995685 HM995744 HM996065 HM996269 HM996387 AF004321 AB063837 AB063906 AB063914 AB067012 AB067013 AB067018 AB067022 AB067235 AB363092 AF099200 AF174076 AY781868 AY866799 AY941859 DQ065663 DQ065677 DQ065701 DQ840709 DQ926327 EF178030 FJ195540 FJ385306 FJ385381 GQ856069 GQ903493 GQ903497 GQ903502 GQ903514 Z92894 AB027437 AB063666 AB063701 AB063715 AB063720 AB063763 AB063768 AB063778 AB063780 AB063785 AB063831 AB063902 AB063903 AB063921 AB066830 AB066835 AB066837 AB066840 AB066841 AB066842 AB066843 AB066928 AB066936 AB066939 AB066942 AB066944 AB066948 AB066949 AB066953 AB067158 AB067170 AB067305 AB067309 AB067333 AB067383 AB363078 AB363086 AB363094 AB363097 AB373608 AF021950 AF021951 AF021952 AF021970 AF021992 AF035784 AF062098 AF062127 AF062189 AF062216 AF062283 AF115114 AF115115 AF115116 AF115118 AF115119 AF174042 AF174065 AF174069 AF174073 AF174096 AF174109 AF174126 AF193848 AF217789 AF408721 AF460964 AF460965 AJ239346 AJ239357 AJ239365 AJ239372 AJ239376 AJ389170 AJ389172 AJ389179 AJ389181 AJ413995 AJ414000 AJ414001 AJ414002 AJ414004 AJ414008 AJ414009 AJ414010 AJ414015 AJ414017 AJ414020 AJ414021 AJ414023 AJ414027 AJ416562 AJ555258 AJ555262 AJ555275 AM040567 AY033246 AY055485 AY059634 AY281328 AY281329 AY466503 AY485361 AY553640 AY557623 AY557624 AY557625 AY557626 AY557627 AY561708 AY577304 AY781812 AY927666 AY941846 AY941940 D16837 DQ100681 DQ100723 DQ100733 DQ100777 DQ100808 DQ100811 DQ100820 DQ100839 DQ100902 DQ100906 DQ100912 DQ100952 DQ212523 DQ490739 DQ926531 EF555585 EF624068 EF624070 EF624071 EF624072 EF624073 EF624078 EF624079 EF624132 EF624136 EF624178 EF624181 EF624194 EF624195 EU202446 EU202448 EU835547 EU835554 FJ039781 FJ039784 FJ385379 GQ903484 GQ903486 GQ903487 GQ903490 GQ903491 GQ903495 GQ903496 GQ903498 GQ903500 GQ903501 GQ903504 GQ903507 GQ903509 GQ903511 GU570264 GU570271 GU570274 HM152493 HM152496 HM152502 HM152504 HM152527 HQ378401 HQ392874 HQ689778 HQ689781 JN158782 JN159449 JN159454 L14454 L23519 S73955 U00518 U00550 U00583 U71105 U85240 U89903 X64237 X67903 Z18841 Z34906 Z34908 Z34957 Z34959 Z34960 Z34961 Z34962 Z34963 AY927663 JN158517 DQ535261 DQ535284 DQ535416 DQ535445 DQ535451 DQ535460 EF177997 EF178006 EF178014 GU570268 Z35123 M18516 AF062105 AF062117 AF062156 AF062161 AF062175 AF062193 AF062198 AF062208 AF174026 AY172957 L06923 M62723 X65889 Z14214 Z47222 Z47224 Z47227 Z47233 Z47244 Z47245 Z47246 Z47247 Z47248 Z47249 Z47250 Z47251 Z47252 Z47253 Z47254 Z47255 Z47256 Z47257 Z47258 Z47259 Z47260 Z47261 Z47262 Z47263 Z47264 Z47265 Z47266 Z47267 Z47268 Z47269 Z47270 Z47271 Z47272 Z47273 Z80837 Z80853 CU688244 L23561 M24669 M24670 TSC_hg19_v1_chr14_-_107170387 BC062336	6229	-	M87789 L29121 BC069016 L08086 AK123800 BC025314 BC026038 AK131045 AK126133 AK130642 TSC_hg19_v1_chr14_-_107170426 AK097360 AK097364 AK128394 AK307688 BC016381 AK096985 AK097305 AK097356 AK123070 AK129512 AK129622 AK129777 AK130786 AK131065 BC070333 AK097361 AK097363 AK058027 AK129809	6409	-	FJ840101 FJ840103 FJ840105 FJ840106 FJ840110 FJ840116 FJ840119 FJ840153 FJ840184 FJ840185 FJ840188 FJ840189 FJ840190 FJ840192 FJ840197 FJ840199 FJ840203 FJ840206 FJ840207 FJ840208 FJ840209 FJ873863 FJ873875 FJ873894 FJ873921 FJ873929 FJ873938 FJ873947 FJ873950 FJ873952 FJ873965 FJ873977 FJ873996 FJ873997 FJ873999 FJ874008 FJ874014 FJ874026 FJ874040 FJ874044 FJ874061 FJ874068 FJ874078 FJ874079 FJ874080 HM116116 HM116121 HM116146 HM116172 HM116181 HM116193 HM116196 HM116197 HM116201 HM116225 GQ232804 GQ232899 AY003747 AY392896 AY393031 AY393032 AY393052 AY393293 AY393389 AY393434 AY393562 AF103042 AF459629 HM774620 HM774632 AM183987 AM279526 AY312400 EF177989 DQ926546 AJ389183 DQ100956 DQ926096 U00507 AB066845 AB066846 AB066847 AB066848 AB066849 AB066853 AB066854 AB066855 AB066856 AB066860 AB066863 AB066867 AB066872 AB066875 AB066876 AB067169 AB067183 AB067187 AB067188 AB067191 AB067197 AB067198 AB067200 AB067201 AB067203 AB067204 AB067205 AB067206 AB067207 AB067208 AB067209 AB067210 AB067211 AB067212 AB067213 AB067215 AB067216 AB067217 AB067219 AB067220 AB067227 AB067230 AF062247 AF174045 AF174063 AF174117 AF442758 AJ239338 AJ239347 AJ389184 AY781820 AY941845 DQ926224 DQ926451 FJ385297 GU570281 GU570282 HQ378332 U00575 U77371 X79160 Z80836 DQ535270 DQ535432 L28050 M34027 AF062153 AJ131058 AY190826 L21960 TSC_hg19_v1_chr14_-_107179280 AK097955	15184	-	AK097017|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130433|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073782|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF067420|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF035025|IGHV1-69|28461|immunoglobulin heavy variable 1-69##BC062336|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##M87789|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC069016|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123800|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC025314|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC026038|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126133|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK130642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097360|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097364|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128394|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016381|IGHM|3507|immunoglobulin heavy constant mu##AK096985|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097305|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097356|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123070|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129512|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129622|IGHM|3507|immunoglobulin heavy constant mu##AK129777|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK131065|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC070333|IGHV1-69|28461|immunoglobulin heavy variable 1-69##AK097361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097363|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058027|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129809|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097955|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.012955	
chr16	70453569	70453648	reg1039644.p2	4.143	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-72780	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-120460	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-120532	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	19373	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	34891	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	49232	+	AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##AK096727|FUK|197258|fucokinase	0.0	
chr3	105555571	105555673	reg1025096.p3	4.143	+	CR749655 TSC_hg19_v1_chr3_-_105421064	-134568	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-469800	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	-470042	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	32185	-	TSC_hg19_v1_chr3_-_106959482 BC036229	1403857	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	1403970	+	CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595	0.0	
chr6	149806056	149806154	reg1029292.p1	4.143	+	TSC_hg19_v1_chr6_-_149806031 AK127932	-38	-	AY340238 NM_001002255 BC130305 HQ258040	-84597	+	AK315038 NM_015093 AK307650	-166664	+	TSC_hg19_v1_chr6_-_149806151 AB458221 AB458222 BC157832 NM_207360	38	-	TSC_hg19_v1_chr6_-_149867153 CU676802 GQ129364 GQ129365 BC064134	61039	-	TSC_hg19_v1_chr6_-_149867172 AF357880 AK092069 AX747342 BX537536 BC107684	61062	-	AK127932|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AB458221|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AB458222|ZC3H12D|340152|zinc finger CCCH-type containing 12D##BC157832|ZC3H12D|340152|zinc finger CCCH-type containing 12D##NM_207360|ZC3H12D|340152|zinc finger CCCH-type containing 12D##GQ129364|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##GQ129365|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC064134|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AF357880|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AK092069|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BX537536|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC107684|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4	0.055222	
chr6	89991947	89992127	reg1011112.p2	4.143	+	AK313609 NM_002042	-64542	-	TSC_hg19_v1_chr6_+_89855838 BC035036 NM_001010853 AK302464 BC045583	-136156	+	AF449428 AB527997 CU692392 TSC_hg19_v1_chr6_-_89827756 AK314008 BC021715 NM_080743	-164335	-	BC130352 BC130354 M86868 NM_002043	32914	-	AB464335 DQ895144 EU176317 AF161502 U93243 TSC_hg19_v1_chr6_-_90062340	70279	-	AJ245898 TSC_hg19_v1_chr6_-_90062433 AF151834	70356	-	AK313609|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1##NM_002042|GABRR1|2569|gamma-aminobutyric acid (GABA) receptor, rho 1##BC035036|PM20D2|135293|peptidase M20 domain containing 2##NM_001010853|PM20D2|135293|peptidase M20 domain containing 2##AK302464|PM20D2|135293|peptidase M20 domain containing 2##BC045583|PM20D2|135293|peptidase M20 domain containing 2##AF449428|SRSF12|135295|serine/arginine-rich splicing factor 12##AK314008|SRSF12|135295|serine/arginine-rich splicing factor 12##BC021715|SRSF12|135295|serine/arginine-rich splicing factor 12##NM_080743|SRSF12|135295|serine/arginine-rich splicing factor 12##BC130352|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##BC130354|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##M86868|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##NM_002043|GABRR2|2570|gamma-aminobutyric acid (GABA) receptor, rho 2##DQ895144|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##EU176317|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AF161502|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##U93243|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AJ245898|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##AF151834|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U	0.012024	
chr10	102000642	102000757	reg1033998.p1	4.142	+	TSC_hg19_v1_chr10_-_101989343 NM_001278 AF080157	-11341	-	U22512 AF012890 AB590489 BC092514 TSC_hg19_v1_chr10_-_101989331 AF009225 AB209028	-11433	-	TSC_hg19_v1_chr10_-_101945787 AF064093 NM_001100626	-54897	-	AL832515 CU679081 AK023984 BC008746 AK001860 AK225590 TSC_hg19_v1_chr10_-_102027422 AK295303 AK097895 NM_018294	26687	-	BC020494 AY278457 AK054697 NM_001001342	45331	-	AY531265 AB463442 TSC_hg19_v1_chr10_-_102046438 AB593084 AK298969 NM_173809	45739	-	NM_001278|CHUK|1147|conserved helix-loop-helix ubiquitous kinase##AF080157|CHUK|1147|conserved helix-loop-helix ubiquitous kinase##U22512|CHUK|1147|conserved helix-loop-helix ubiquitous kinase##AF012890|CHUK|1147|conserved helix-loop-helix ubiquitous kinase##BC092514|CHUK|1147|conserved helix-loop-helix ubiquitous kinase##AF009225|CHUK|1147|conserved helix-loop-helix ubiquitous kinase##AB209028|CHUK|1147|conserved helix-loop-helix ubiquitous kinase##AF064093|ERLIN1|10613|ER lipid raft associated 1##NM_001100626|ERLIN1|10613|ER lipid raft associated 1##AL832515|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##AK023984|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##BC008746|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##AK001860|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##AK225590|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##AK295303|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##AK097895|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##NM_018294|CWF19L1|55280|CWF19-like 1, cell cycle control (S. pombe)##BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AY531265|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AB593084|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AK298969|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_173809|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2	0.073977	
chr11	72660775	72660872	reg1030762.p1	4.142	+	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-135341	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-135418	+	AB209473 AK095668 BC035482 BC007919 BC014033 AK310301 AK315255 NM_006645	-156127	-	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	192226	-	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	268521	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	268623	+	BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK095668|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC035482|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC007919|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC014033|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AK315255|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##NM_006645|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.0	
chr1	209866579	209866661	reg1000806.p2	4.142	+	NM_001206741 NM_181755	-7096	+	TSC_hg19_v1_chr1_+_209848994 BT007101 CR542179 CR542193 DQ894610 EU176279	-17609	+	TSC_hg19_v1_chr1_+_209848757 NM_015714 BC009694	-17896	+	NM_005525 TSC_hg19_v1_chr1_+_209878192 BC012593 AK313973 AB590223 DQ892912 EU176721	11591	+	TSC_hg19_v1_chr1_+_209929480 AK122792 NM_025228 BX648450 BC110302 AK300555 AK312755 AK225762 AL049667	62830	+	TSC_hg19_v1_chr1_+_209941909 AK126139	75296	+	NM_001206741|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##NM_181755|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##BT007101|G0S2|50486|G0/G1switch 2##CR542179|G0S2|50486|G0/G1switch 2##CR542193|G0S2|50486|G0/G1switch 2##DQ894610|G0S2|50486|G0/G1switch 2##EU176279|G0S2|50486|G0/G1switch 2##NM_015714|G0S2|50486|G0/G1switch 2##BC009694|G0S2|50486|G0/G1switch 2##NM_005525|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##BC012593|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##AK313973|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##DQ892912|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##EU176721|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##AK122792|TRAF3IP3|80342|TRAF3 interacting protein 3##NM_025228|TRAF3IP3|80342|TRAF3 interacting protein 3##BX648450|TRAF3IP3|80342|TRAF3 interacting protein 3##BC110302|TRAF3IP3|80342|TRAF3 interacting protein 3##AK300555|TRAF3IP3|80342|TRAF3 interacting protein 3##AK312755|TRAF3IP3|80342|TRAF3 interacting protein 3##AK225762|TRAF3IP3|80342|TRAF3 interacting protein 3##AL049667|TRAF3IP3|80342|TRAF3 interacting protein 3##AK126139|TRAF3IP3|80342|TRAF3 interacting protein 3	0.0	
chr12	92860433	92860613	reg1030971.p1	4.142	+	AJ845168 NM_001025232	-38600	-	AJ845165 AJ845166 NM_001025233	-42789	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-320880	-	NM_001037671 NM_001178097	236095	+	NM_001004330 AK128530	269764	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	462415	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr16	88878472	88878591	reg1022572.p1	4.142	+	TSC_hg19_v1_chr16_-_88878337 BC107151 CR749423 NM_000485 NM_001030018	-196	-	TSC_hg19_v1_chr16_+_88870215 AF321125 BC000137 BC009410 BC008860 BC008676	-8251	+	AB053172 NM_030928 TSC_hg19_v1_chr16_+_88870207	-8334	+	AK308269 BX649181 AK310392 TSC_hg19_v1_chr16_-_88923340	44757	-	AK294390 TSC_hg19_v1_chr16_-_88923352 AK312655 BC056151 BC050684 NM_000512 BC018027	44839	-	TSC_hg19_v1_chr16_+_88923536 NM_016209 AF089106 AX771012 AK311885 BC105809 AK126779 AF161524 AK310805 AX771013 BC018024 AX771014 BC011369	44992	+	BC107151|APRT|353|adenine phosphoribosyltransferase##CR749423|APRT|353|adenine phosphoribosyltransferase##NM_000485|APRT|353|adenine phosphoribosyltransferase##NM_001030018|APRT|353|adenine phosphoribosyltransferase##AF321125|CDT1|81620|chromatin licensing and DNA replication factor 1##BC000137|CDT1|81620|chromatin licensing and DNA replication factor 1##BC009410|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008860|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008676|CDT1|81620|chromatin licensing and DNA replication factor 1##AB053172|CDT1|81620|chromatin licensing and DNA replication factor 1##NM_030928|CDT1|81620|chromatin licensing and DNA replication factor 1##AK308269|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BX649181|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK310392|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK294390|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##AK312655|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC056151|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC050684|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##NM_000512|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##BC018027|GALNS|2588|galactosamine (N-acetyl)-6-sulfate sulfatase##NM_016209|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF089106|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771012|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK311885|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC105809|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK126779|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF161524|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK310805|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771013|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC018024|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771014|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC011369|TRAPPC2L|51693|trafficking protein particle complex 2-like	0.0	
chr2	70343228	70343314	reg1027621.p2	4.142	+	TSC_hg19_v1_chr2_+_70314983 BC013020	-28273	+	AK130439 TSC_hg19_v1_chr2_+_70314932	-28354	+	TSC_hg19_v1_chr2_+_70314854 Z29505 X78137 AB464656 CU691762	-28444	+	TSC_hg19_v1_chr2_-_70418137 BC002825 BC005079 AK000565 NM_017880	74850	-	CU677529 AB528896 BC015944 M77142 TSC_hg19_v1_chr2_-_70475711 NM_022037 NM_022173 AK303345	132448	-	TSC_hg19_v1_chr2_+_70485278 NM_016297 AF181490 BC051891 AY359063 BC033815 AK314453 AK225302 AK303043 BC022259 AB020715 DQ890801 DQ893956 CU689758	141979	+	AK130439|PCBP1|5093|poly(rC) binding protein 1##Z29505|PCBP1|5093|poly(rC) binding protein 1##X78137|PCBP1|5093|poly(rC) binding protein 1##BC002825|C2orf42|54980|chromosome 2 open reading frame 42##BC005079|C2orf42|54980|chromosome 2 open reading frame 42##AK000565|C2orf42|54980|chromosome 2 open reading frame 42##NM_017880|C2orf42|54980|chromosome 2 open reading frame 42##BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_016297|PCYOX1|51449|prenylcysteine oxidase 1##AF181490|PCYOX1|51449|prenylcysteine oxidase 1##BC051891|PCYOX1|51449|prenylcysteine oxidase 1##AY359063|PCYOX1|51449|prenylcysteine oxidase 1##BC033815|PCYOX1|51449|prenylcysteine oxidase 1##AK314453|PCYOX1|51449|prenylcysteine oxidase 1##AK225302|PCYOX1|51449|prenylcysteine oxidase 1##AK303043|PCYOX1|51449|prenylcysteine oxidase 1##BC022259|PCYOX1|51449|prenylcysteine oxidase 1##AB020715|PCYOX1|51449|prenylcysteine oxidase 1##DQ890801|PCYOX1|51449|prenylcysteine oxidase 1##DQ893956|PCYOX1|51449|prenylcysteine oxidase 1	0.0	
chr7	92463191	92463371	reg1012458.p4	4.142	+	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	-61	-	AB528631 CU690894 X66365 TSC_hg19_v1_chr7_-_92462894	-514	-	TSC_hg19_v1_chr7_-_92219705 BC079834 BC090868 BC057771 AK125498 AL833918 BC017874 NM_001040057 NM_152789 BC062706	-243583	-	AK313491 TSC_hg19_v1_chr7_-_92465884	2617	-	TSC_hg19_v1_chr7_-_92465935 NM_001145306	2653	-	AB095925 BC150249 AK122951 TSC_hg19_v1_chr7_-_92747292 BX647072 AF453311	284002	-	BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##X66365|CDK6|1021|cyclin-dependent kinase 6##BC090868|FAM133B|257415|family with sequence similarity 133, member B##BC057771|FAM133B|257415|family with sequence similarity 133, member B##AK125498|FAM133B|257415|family with sequence similarity 133, member B##AL833918|FAM133B|257415|family with sequence similarity 133, member B##BC017874|FAM133B|257415|family with sequence similarity 133, member B##NM_001040057|FAM133B|257415|family with sequence similarity 133, member B##NM_152789|FAM133B|257415|family with sequence similarity 133, member B##BC062706|FAM133B|257415|family with sequence similarity 133, member B##AK313491|CDK6|1021|cyclin-dependent kinase 6##NM_001145306|CDK6|1021|cyclin-dependent kinase 6##AB095925|SAMD9|54809|sterile alpha motif domain containing 9##BC150249|SAMD9|54809|sterile alpha motif domain containing 9##AK122951|SAMD9|54809|sterile alpha motif domain containing 9##BX647072|SAMD9|54809|sterile alpha motif domain containing 9##AF453311|SAMD9|54809|sterile alpha motif domain containing 9	0.0	
chr8	144976605	144976786	reg1001760.p1	4.142	+	AB051895 NM_031308	-29262	-	TSC_hg19_v1_chr8_-_144923180 BC071605 AK293943 NM_178564	-53536	-	TSC_hg19_v1_chr8_-_144911540 AF114818 AK292373 NM_014281 NM_078480	-65145	-	AF330791 TSC_hg19_v1_chr8_-_145013766 AY480051 NM_201384	37008	-	AY480050 NM_201383 TSC_hg19_v1_chr8_-_145016793	40066	-	AF330792 AY480049 TSC_hg19_v1_chr8_-_145018117 NM_201382	41409	-	AB051895|EPPK1|83481|epiplakin 1##NM_031308|EPPK1|83481|epiplakin 1##BC071605|NRBP2|340371|nuclear receptor binding protein 2##AK293943|NRBP2|340371|nuclear receptor binding protein 2##NM_178564|NRBP2|340371|nuclear receptor binding protein 2##AF114818|PUF60|22827|poly-U binding splicing factor 60KDa##AK292373|PUF60|22827|poly-U binding splicing factor 60KDa##NM_014281|PUF60|22827|poly-U binding splicing factor 60KDa##NM_078480|PUF60|22827|poly-U binding splicing factor 60KDa##AY480051|PLEC|5339|plectin##NM_201384|PLEC|5339|plectin##AY480050|PLEC|5339|plectin##NM_201383|PLEC|5339|plectin##AF330792|PLEC|5339|plectin##AY480049|PLEC|5339|plectin##NM_201382|PLEC|5339|plectin	0.14168	
chr9	129748347	129748511	reg1032069.p2	4.142	+	AF221098 NM_001190728 AB385313 CU689706	-23894	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	-71325	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	-125485	+	AK075026 TSC_hg19_v1_chr9_-_129870392	121923	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	136479	-	TSC_hg19_v1_chr9_-_129884962 AK312876	136533	-	AF221098|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190728|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AK075026|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2	0.0	
chr11	119362616	119362728	reg1036199.p2	4.141	+	BC037832 NM_006288	-68429	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-68763	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	-110273	-	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	236710	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	636874	-	AK299472 TSC_hg19_v1_chr11_-_120008323	645600	-	BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29	0.041562	
chr11	19926947	19927063	reg1038335.p1	4.141	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	-192139	+	AB063115 NM_001111018 AJ488205	-554690	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-663804	-	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	117383	+	TSC_hg19_v1_chr11_+_20049136 AK307574	122127	+	AK290458 TSC_hg19_v1_chr11_+_20070637	143618	+	AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##AK290458|NAV2|89797|neuron navigator 2	0.205617	CTCF.p2:-10:0.206
chr1	147103076	147103183	reg1044678.p2	4.141	+	NM_004326 Y13620 AK298105 TSC_hg19_v1_chr1_+_147013319	-89878	+	TSC_hg19_v1_chr1_+_146714335 AK298424 AK297135 BC077717 AK293157 BC001171 AF054177 BC043501 BC053354 BC005038	-388765	+	NM_004284 TSC_hg19_v1_chr1_+_146714333 EF560738 AF537213 AK001342 AK027631 AK307400	-388818	+	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	39365	-	BC013313 NM_181703	129569	-	NM_005266	142354	-	NM_004326|BCL9|607|B-cell CLL/lymphoma 9##Y13620|BCL9|607|B-cell CLL/lymphoma 9##AK298424|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK297135|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC077717|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK293157|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC001171|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF054177|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC043501|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC053354|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC005038|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##NM_004284|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##EF560738|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF537213|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK001342|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK027631|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK307400|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_005266|GJA5|2702|gap junction protein, alpha 5, 40kDa	0.0	
chr16	67047807	67047955	reg1024003.p1	4.141	+	NM_001190201 NM_001190202 TSC_hg19_v1_chr16_+_67034441 AK094783 AK300792 AK295483 BC041823 BC064573	-13333	+	AK293061 NM_173815 AK296064	-25352	+	AK025389 NM_001185176	-46504	+	TSC_hg19_v1_chr16_+_67063051 BC018509 NM_001755 NM_022845	15166	+	TSC_hg19_v1_chr16_+_67063217 AK290462 AK291834 AB463544 AF294326 BT006862 CU676254 DQ890558 DQ893719 L20298 AK311724	15407	+	TSC_hg19_v1_chr16_+_67143864 AF176088 BC004556 NM_025187	95973	+	NM_001190201|CES4A|283848|carboxylesterase 4A##NM_001190202|CES4A|283848|carboxylesterase 4A##AK094783|CES4A|283848|carboxylesterase 4A##AK300792|CES4A|283848|carboxylesterase 4A##AK295483|CES4A|283848|carboxylesterase 4A##BC041823|CES4A|283848|carboxylesterase 4A##BC064573|CES4A|283848|carboxylesterase 4A##AK293061|CES4A|283848|carboxylesterase 4A##NM_173815|CES4A|283848|carboxylesterase 4A##AK296064|CES4A|283848|carboxylesterase 4A##AK025389|CES3|23491|carboxylesterase 3##NM_001185176|CES3|23491|carboxylesterase 3##BC018509|CBFB|865|core-binding factor, beta subunit##NM_001755|CBFB|865|core-binding factor, beta subunit##NM_022845|CBFB|865|core-binding factor, beta subunit##AK290462|CBFB|865|core-binding factor, beta subunit##AK291834|CBFB|865|core-binding factor, beta subunit##AF294326|CBFB|865|core-binding factor, beta subunit##BT006862|CBFB|865|core-binding factor, beta subunit##DQ890558|CBFB|865|core-binding factor, beta subunit##DQ893719|CBFB|865|core-binding factor, beta subunit##L20298|CBFB|865|core-binding factor, beta subunit##AK311724|CBFB|865|core-binding factor, beta subunit##AF176088|C16orf70|80262|chromosome 16 open reading frame 70##BC004556|C16orf70|80262|chromosome 16 open reading frame 70##NM_025187|C16orf70|80262|chromosome 16 open reading frame 70	0.0	
chr19	5139382	5139562	reg1028731.p2	4.141	+	TSC_hg19_v1_chr19_+_5032899 CU687848	-106573	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-170299	+	NM_015015 TSC_hg19_v1_chr19_+_4969124	-170348	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	201322	-	AK098722 NM_181710 AK292251 BC017592	315954	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	483286	-	AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##NM_015015|KDM4B|23030|lysine (K)-specific demethylase 4B##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2	0.0	
chr20	47443461	47443587	reg1037576.p2	4.141	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-1028206	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-1028772	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1312840	+	AB037836 TSC_hg19_v1_chr20_-_47444291	762	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	915	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	94794	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr22	47193486	47193589	reg1036763.p1	4.141	+	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	-34937	+	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	-59382	-	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	-59458	-	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	833966	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	1691743	+	AK125256 NM_015381 AK123443 AY358847	1778624	+	NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##AK093107|LOC284930|284930|uncharacterized LOC284930##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	0.987757	CTCF.p2:-2:0.988
chr3	108817284	108817416	reg1030601.p2	4.141	+	AF110003 EU832759 GQ129299 AF110002 BC103993 BC103994 AB593147 NM_005459	-144739	-	AK291991 AJ240085 AF161547 NM_016388 BC025713 AJ224878	-275756	+	HQ258043 AM050721 BC113502 BC113528 BC069318 AF290873 AF323084 AY358655 NM_032579 TSC_hg19_v1_chr3_-_108476258	-341205	-	CU690636 BC050307 AK302642 AF084946 BC028680 NM_014429	19600	-	AK026416 TSC_hg19_v1_chr3_+_108855566	38213	+	BC018070 AY283672 NM_138815	217951	-	AF110003|GUCA1C|9626|guanylate cyclase activator 1C##EU832759|GUCA1C|9626|guanylate cyclase activator 1C##GQ129299|GUCA1C|9626|guanylate cyclase activator 1C##AF110002|GUCA1C|9626|guanylate cyclase activator 1C##BC103993|GUCA1C|9626|guanylate cyclase activator 1C##BC103994|GUCA1C|9626|guanylate cyclase activator 1C##AB593147|GUCA1C|9626|guanylate cyclase activator 1C##NM_005459|GUCA1C|9626|guanylate cyclase activator 1C##AK291991|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ240085|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AF161547|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##NM_016388|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##BC025713|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ224878|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##HQ258043|RETNLB|84666|resistin like beta##AM050721|RETNLB|84666|resistin like beta##BC113502|RETNLB|84666|resistin like beta##BC113528|RETNLB|84666|resistin like beta##BC069318|RETNLB|84666|resistin like beta##AF290873|RETNLB|84666|resistin like beta##AF323084|RETNLB|84666|resistin like beta##AY358655|RETNLB|84666|resistin like beta##NM_032579|RETNLB|84666|resistin like beta##BC050307|MORC1|27136|MORC family CW-type zinc finger 1##AK302642|MORC1|27136|MORC family CW-type zinc finger 1##AF084946|MORC1|27136|MORC family CW-type zinc finger 1##BC028680|MORC1|27136|MORC family CW-type zinc finger 1##NM_014429|MORC1|27136|MORC family CW-type zinc finger 1##AK026416|FLJ22763|401081|uncharacterized LOC401081##BC018070|DPPA2|151871|developmental pluripotency associated 2##AY283672|DPPA2|151871|developmental pluripotency associated 2##NM_138815|DPPA2|151871|developmental pluripotency associated 2	0.593987	CTCF.p2:-34:0.594
chr6	16711920	16712046	reg1037436.p1	4.141	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-473132	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-568673	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-582546	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	49714	-	NM_001190766	390505	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	569871	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.0	
chrX	39021883	39021990	reg1029897.p2	4.141	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-358396	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-358476	+	BC008908 NM_021242	-358864	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	934756	-	BC114220 NM_001123383 NM_001123384	1014645	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	1418250	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.0	
chr10	12307864	12308043	reg1032384.p2	4.140	+	TSC_hg19_v1_chr10_+_12238212 BC001600 AK289362 CR456966	-69727	+	TSC_hg19_v1_chr10_+_12238194 BC009598	-69754	+	TSC_hg19_v1_chr10_+_12238186 U27112 AK308790	-69771	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	83622	+	TSC_hg19_v1_chr10_+_12391709 BC035745	83764	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	83824	+	BC001600|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289362|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##CR456966|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##BC009598|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##U27112|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK308790|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID	0.840271	CTCF.p2:0:0.840
chr1	167606493	167606637	reg1015785.p1	4.140	+	TSC_hg19_v1_chr1_+_167599557 AL137762 BC101536 BC101562 BC143428	-6996	+	AF545852 TSC_hg19_v1_chr1_+_167599495 NM_052862 AK130798	-7152	+	TSC_hg19_v1_chr1_-_167523043 NM_003851	-83502	-	TSC_hg19_v1_chr1_+_167691226 NM_001146191 NM_003953 NM_024569 AK297112 AK075334 AK307250 AK291249 AY359019 AF181660 AF478447 BC000984 BC007881 AF095727 AF087020 AF092425 AF095726 AK315546 AB527648 AF239756 BT019542 CR542160 HQ447352	84763	+	BC117366 BC117372 AF176813 AF299350 AF331033 AK310395 AK310531 AK302884 NM_001167749 NM_018417	276782	-	AB528078 AM393085 CR407632 CR533473 TSC_hg19_v1_chr1_-_167905197 BC104157 BC104158	298577	-	AL137762|RCSD1|92241|RCSD domain containing 1##BC101536|RCSD1|92241|RCSD domain containing 1##BC101562|RCSD1|92241|RCSD domain containing 1##BC143428|RCSD1|92241|RCSD domain containing 1##AF545852|RCSD1|92241|RCSD domain containing 1##NM_052862|RCSD1|92241|RCSD domain containing 1##NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1##NM_001146191|MPZL1|9019|myelin protein zero-like 1##NM_003953|MPZL1|9019|myelin protein zero-like 1##NM_024569|MPZL1|9019|myelin protein zero-like 1##AK297112|MPZL1|9019|myelin protein zero-like 1##AK075334|MPZL1|9019|myelin protein zero-like 1##AK307250|MPZL1|9019|myelin protein zero-like 1##AK291249|MPZL1|9019|myelin protein zero-like 1##AY359019|MPZL1|9019|myelin protein zero-like 1##AF181660|MPZL1|9019|myelin protein zero-like 1##AF478447|MPZL1|9019|myelin protein zero-like 1##BC000984|MPZL1|9019|myelin protein zero-like 1##BC007881|MPZL1|9019|myelin protein zero-like 1##AF095727|MPZL1|9019|myelin protein zero-like 1##AF087020|MPZL1|9019|myelin protein zero-like 1##AF092425|MPZL1|9019|myelin protein zero-like 1##AF095726|MPZL1|9019|myelin protein zero-like 1##AK315546|MPZL1|9019|myelin protein zero-like 1##AF239756|MPZL1|9019|myelin protein zero-like 1##BT019542|MPZL1|9019|myelin protein zero-like 1##CR542160|MPZL1|9019|myelin protein zero-like 1##HQ447352|MPZL1|9019|myelin protein zero-like 1##BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)##BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)##AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)##AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)##AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)##AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)##AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)##AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)##NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)##NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)##AM393085|BRP44|25874|brain protein 44##CR407632|BRP44|25874|brain protein 44##CR533473|BRP44|25874|brain protein 44##BC104157|BRP44|25874|brain protein 44##BC104158|BRP44|25874|brain protein 44	0.0	
chr19	2096317	2096497	reg1026907.p2	4.140	+	TSC_hg19_v1_chr19_-_2096297 AL832474	-113	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	-142	-	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	-11164	-	TSC_hg19_v1_chr19_+_2096913 AY358444 NM_001031735 NM_001039846 DQ196309 DQ196310 AK301957 AY753639 BC014609 BC040964 BC010443	453	+	TSC_hg19_v1_chr19_+_2096982 CU677067 DQ424900 AK294083	556	+	CU679595 AB384738 BC005142 TSC_hg19_v1_chr19_-_2151519	55018	-	AL832474|MOB3A|126308|MOB kinase activator 3A##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##AY358444|IZUMO4|113177|IZUMO family member 4##NM_001031735|IZUMO4|113177|IZUMO family member 4##NM_001039846|IZUMO4|113177|IZUMO family member 4##DQ196309|IZUMO4|113177|IZUMO family member 4##DQ196310|IZUMO4|113177|IZUMO family member 4##AK301957|IZUMO4|113177|IZUMO family member 4##AY753639|IZUMO4|113177|IZUMO family member 4##BC014609|IZUMO4|113177|IZUMO family member 4##BC040964|IZUMO4|113177|IZUMO family member 4##BC010443|IZUMO4|113177|IZUMO family member 4##DQ424900|IZUMO4|113177|IZUMO family member 4##AK294083|IZUMO4|113177|IZUMO family member 4##BC005142|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit	0.0	
chr20	19054336	19054464	reg1030082.p1	4.140	+	NM_001242671	-243562	-	AF418568 AF418570 AX721297 NM_178483 AK130970 AY248902 BC105121 BC112024	-260002	+	TSC_hg19_v1_chr20_+_18568661 NM_080820 BC045167 AK074304 BC100923 BC100924 BC100925 BC100926 AK291440 AF332356 CU692252	-485750	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	138885	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	139053	+	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	812743	+	NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AF418568|C20orf79|140856|chromosome 20 open reading frame 79##AF418570|C20orf79|140856|chromosome 20 open reading frame 79##NM_178483|C20orf79|140856|chromosome 20 open reading frame 79##AK130970|C20orf79|140856|chromosome 20 open reading frame 79##AY248902|C20orf79|140856|chromosome 20 open reading frame 79##BC105121|C20orf79|140856|chromosome 20 open reading frame 79##BC112024|C20orf79|140856|chromosome 20 open reading frame 79##NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2	0.997992	CTCF.p2:5:0.998
chr2	164048046	164048151	reg1036817.p1	4.140	+	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-352851	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-352974	-	TSC_hg19_v1_chr2_+_163200633 AK312349 M81637 BC005214 AB209768 AB529141 CU675051 AK295413	-847337	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	544419	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	1376906	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	1429795	-	BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK312349|GCA|25801|grancalcin, EF-hand calcium binding protein##M81637|GCA|25801|grancalcin, EF-hand calcium binding protein##BC005214|GCA|25801|grancalcin, EF-hand calcium binding protein##AB209768|GCA|25801|grancalcin, EF-hand calcium binding protein##AK295413|GCA|25801|grancalcin, EF-hand calcium binding protein##BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14	0.975656	CTCF.p2:-4:0.976
chr6	16432430	16432610	reg1030705.p1	4.140	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-193669	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-289210	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-303083	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	329177	-	NM_001190766	669968	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	849334	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.0	
chr6	167276277	167276358	reg1033665.p1	4.140	+	TSC_hg19_v1_chr6_-_167276000 AK095751	-309	-	AB384854 NM_001006932 AB209116	-589	-	TSC_hg19_v1_chr6_-_167040713 BC002363 NM_021135	-235599	-	DQ884402 TSC_hg19_v1_chr6_-_167369732	93385	-	TSC_hg19_v1_chr6_-_167370030 BC001660 BC001819 BC039713 BC051912 AJ419865 AJ419866 AJ419867 U85625	93693	-	AK315467 TSC_hg19_v1_chr6_-_167370038 BC036282 NM_003730	93740	-	AK095751|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_001006932|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##AB209116|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##BC001660|RNASET2|8635|ribonuclease T2##BC001819|RNASET2|8635|ribonuclease T2##BC039713|RNASET2|8635|ribonuclease T2##BC051912|RNASET2|8635|ribonuclease T2##AJ419865|RNASET2|8635|ribonuclease T2##AJ419866|RNASET2|8635|ribonuclease T2##AJ419867|RNASET2|8635|ribonuclease T2##U85625|RNASET2|8635|ribonuclease T2##AK315467|RNASET2|8635|ribonuclease T2##BC036282|RNASET2|8635|ribonuclease T2##NM_003730|RNASET2|8635|ribonuclease T2	0.0	
chr6	64214731	64214905	reg1033980.p1	4.140	+	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	-184954	-	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	-1218817	-	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	-5927139	-	TSC_hg19_v1_chr6_+_64231650 CR749458	16837	+	TSC_hg19_v1_chr6_+_64281913 BC045571 NM_003463	67098	+	TSC_hg19_v1_chr6_+_64282432 AK312526	67617	+	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AK312526|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	0.079419	
chr7	641257	641437	reg1035250.p1	4.140	+	TSC_hg19_v1_chr7_-_559484 NM_002607 NM_033023	-81862	-	X03795 X06374 TSC_hg19_v1_chr7_-_559093	-82283	-	TSC_hg19_v1_chr7_-_558849 AK292217	-82513	-	AK289464 TSC_hg19_v1_chr7_-_752095 AK297337	110751	-	BC036828 TSC_hg19_v1_chr7_-_752142 AK315951 NM_002735	110800	-	NM_001164762	111229	-	NM_002607|PDGFA|5154|platelet-derived growth factor alpha polypeptide##NM_033023|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X03795|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X06374|PDGFA|5154|platelet-derived growth factor alpha polypeptide##AK292217|PDGFA|5154|platelet-derived growth factor alpha polypeptide##AK289464|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK297337|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##BC036828|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK315951|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_002735|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164762|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta	0.0	
chr1	117087720	117087796	reg1033075.p2	4.139	+	TSC_hg19_v1_chr1_-_116961216 AK309389	-126520	-	TSC_hg19_v1_chr1_-_116961205 BC007373 BC018892 BC028281 BC069003 AK309872 BC098428	-126568	-	AK296362 NM_001160234	-161767	+	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	25857	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	25919	-	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	122625	-	AK309389|ATP1A1OS|84852|ATP1A1 opposite strand##BC007373|ATP1A1OS|84852|ATP1A1 opposite strand##BC018892|ATP1A1OS|84852|ATP1A1 opposite strand##BC028281|ATP1A1OS|84852|ATP1A1 opposite strand##BC069003|ATP1A1OS|84852|ATP1A1 opposite strand##AK309872|ATP1A1OS|84852|ATP1A1 opposite strand##BC098428|ATP1A1OS|84852|ATP1A1 opposite strand##AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3	0.0	
chr11	32892382	32892490	reg1032831.p2	4.139	+	TSC_hg19_v1_chr11_+_32851476 BC010052 NM_024081 BC063393 AF326351	-40886	+	BC146800 AK131470 NM_001008391 BC062749	-76259	-	TSC_hg19_v1_chr11_+_32605376 AK131064 AK292139 AK304378 AK001768 AK300002 AF064603 BC051292 BC011937 BC019103 NM_006360 AK222564 AK307121 CU676384 AY769947 CR450300 DQ185042	-287038	+	TSC_hg19_v1_chr11_+_32914677 BC112935 NM_001076786	22139	+	TSC_hg19_v1_chr11_+_33037423 BC030970 NM_001077242 AK294934 BC011446 AJ245600 AK295960 EU446553 CU689058	145012	+	AF447588 NM_139160	145291	+	BC010052|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##NM_024081|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC063393|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##AF326351|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC146800|CCDC73|493860|coiled-coil domain containing 73##AK131470|CCDC73|493860|coiled-coil domain containing 73##NM_001008391|CCDC73|493860|coiled-coil domain containing 73##BC062749|CCDC73|493860|coiled-coil domain containing 73##AK131064|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK292139|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK304378|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK001768|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK300002|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AF064603|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC051292|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC011937|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC019103|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##NM_006360|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK222564|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK307121|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AY769947|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##CR450300|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##DQ185042|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC112935|QSER1|79832|glutamine and serine rich 1##NM_001076786|QSER1|79832|glutamine and serine rich 1##BC030970|DEPDC7|91614|DEP domain containing 7##NM_001077242|DEPDC7|91614|DEP domain containing 7##AK294934|DEPDC7|91614|DEP domain containing 7##BC011446|DEPDC7|91614|DEP domain containing 7##AJ245600|DEPDC7|91614|DEP domain containing 7##AK295960|DEPDC7|91614|DEP domain containing 7##EU446553|DEPDC7|91614|DEP domain containing 7##AF447588|DEPDC7|91614|DEP domain containing 7##NM_139160|DEPDC7|91614|DEP domain containing 7	0.997692	CTCF.p2:8:0.998
chr11	96075017	96075121	reg1032557.p1	4.139	+	BC052990 BC012086 TSC_hg19_v1_chr11_-_95657272 BC034474 BX647997 NM_001243571 NM_016156 NM_201278 NM_201281 AB028996	-417713	-	AK293243 TSC_hg19_v1_chr11_-_95657092 AK302940 BC040432 AK291277	-418018	-	D42054 BC039711 BC029385 AB385276 AY225092 CU691748 TSC_hg19_v1_chr11_+_95523869	-551229	+	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	1334	-	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	47973	-	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	48105	+	BC052990|MTMR2|8898|myotubularin related protein 2##BC012086|MTMR2|8898|myotubularin related protein 2##BC034474|MTMR2|8898|myotubularin related protein 2##BX647997|MTMR2|8898|myotubularin related protein 2##NM_001243571|MTMR2|8898|myotubularin related protein 2##NM_016156|MTMR2|8898|myotubularin related protein 2##NM_201278|MTMR2|8898|myotubularin related protein 2##NM_201281|MTMR2|8898|myotubularin related protein 2##AB028996|MTMR2|8898|myotubularin related protein 2##AK293243|MTMR2|8898|myotubularin related protein 2##AK302940|MTMR2|8898|myotubularin related protein 2##BC040432|MTMR2|8898|myotubularin related protein 2##AK291277|MTMR2|8898|myotubularin related protein 2##D42054|CEP57|9702|centrosomal protein 57kDa##BC039711|CEP57|9702|centrosomal protein 57kDa##BC029385|CEP57|9702|centrosomal protein 57kDa##AY225092|CEP57|9702|centrosomal protein 57kDa##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)	0.0	
chr14	101176177	101176314	reg1033334.p1	4.139	+	BC002607 NM_020836	-140115	-	AB527893 CU678064 EU832622 EU832695 NM_001159531	-141912	-	TSC_hg19_v1_chr14_+_100842812 NM_001161476 BX248767 AK291960 NM_024515 BC067872 AY295082	-333407	+	TSC_hg19_v1_chr14_+_101193228 NM_003836 AK289384 AK297918 AK313258 BC007741 BC014015	16978	+	TSC_hg19_v1_chr14_+_101193275 BC013197	17035	+	TSC_hg19_v1_chr14_+_101193330 CU675787 DQ017081 DQ126100 DQ138965 Z12172	17114	+	BC002607|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_020836|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832622|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832695|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001159531|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001161476|WDR25|79446|WD repeat domain 25##BX248767|WDR25|79446|WD repeat domain 25##AK291960|WDR25|79446|WD repeat domain 25##NM_024515|WDR25|79446|WD repeat domain 25##BC067872|WDR25|79446|WD repeat domain 25##AY295082|WDR25|79446|WD repeat domain 25##NM_003836|DLK1|8788|delta-like 1 homolog (Drosophila)##AK289384|DLK1|8788|delta-like 1 homolog (Drosophila)##AK297918|DLK1|8788|delta-like 1 homolog (Drosophila)##AK313258|DLK1|8788|delta-like 1 homolog (Drosophila)##BC007741|DLK1|8788|delta-like 1 homolog (Drosophila)##BC014015|DLK1|8788|delta-like 1 homolog (Drosophila)##BC013197|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ017081|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ126100|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ138965|DLK1|8788|delta-like 1 homolog (Drosophila)##Z12172|DLK1|8788|delta-like 1 homolog (Drosophila)	1.228476	CTCF.p2:-29:0.880	CTCF.p2:83:0.348
chr16	71641730	71641859	reg1034335.p1	4.139	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	-30822	-	NM_005769 AF131235 NM_001166395 AK026635 AK074746	-81701	+	AK292260 BC030658 AK057330 BC047091 NM_006961	-118579	-	BC005052 NM_001017967 NM_052858 AK307585 BC011893 BC013376 AK056842 AK292185 CU680584	18303	+	AB463166 AM393067 AM393542 BC129927 BC129983 NM_015020	106906	-	TSC_hg19_v1_chr16_-_71757789 AK124678	115970	-	X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase##NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19##BC005052|MARVELD3|91862|MARVEL domain containing 3##NM_001017967|MARVELD3|91862|MARVEL domain containing 3##NM_052858|MARVELD3|91862|MARVEL domain containing 3##AK307585|MARVELD3|91862|MARVEL domain containing 3##BC011893|MARVELD3|91862|MARVEL domain containing 3##BC013376|MARVELD3|91862|MARVEL domain containing 3##AK056842|MARVELD3|91862|MARVEL domain containing 3##AK292185|MARVELD3|91862|MARVEL domain containing 3##AM393067|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AM393542|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129927|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129983|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##NM_015020|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AK124678|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2	0.0	
chr17	61966458	61966561	reg1030942.p1	4.139	+	AB451332 AB451477 AF006061 AF006060 M38451 BC020760 J03756 NM_002059 NM_022556 NM_022557 NM_022558 AK312194	-7318	-	V00573 BC119748 BC022044 BC035965 NM_020991 NM_022644 NM_022645	-15467	-	TSC_hg19_v1_chr17_-_61920365 BC136322 NM_001098426 U66618	-46159	-	BT006926 J00118 BC002717 AK291587 BC005921 BC057768 BC062775 BC020756 NM_001317 M35419	7442	-	BC119747 BC029365 NM_001318 NM_022579 NM_022580 NM_022581 AX772828	22148	-	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	29657	-	AB451332|GH2|2689|growth hormone 2##AB451477|GH2|2689|growth hormone 2##AF006061|GH2|2689|growth hormone 2##AF006060|GH2|2689|growth hormone 2##M38451|GH2|2689|growth hormone 2##BC020760|GH2|2689|growth hormone 2##J03756|GH2|2689|growth hormone 2##NM_002059|GH2|2689|growth hormone 2##NM_022556|GH2|2689|growth hormone 2##NM_022557|GH2|2689|growth hormone 2##NM_022558|GH2|2689|growth hormone 2##AK312194|GH2|2689|growth hormone 2##V00573|CSH2|1443|chorionic somatomammotropin hormone 2##BC119748|CSH2|1443|chorionic somatomammotropin hormone 2##BC022044|CSH2|1443|chorionic somatomammotropin hormone 2##BC035965|CSH2|1443|chorionic somatomammotropin hormone 2##NM_020991|CSH2|1443|chorionic somatomammotropin hormone 2##NM_022644|CSH2|1443|chorionic somatomammotropin hormone 2##NM_022645|CSH2|1443|chorionic somatomammotropin hormone 2##BC136322|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##NM_001098426|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##U66618|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##BT006926|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##J00118|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC002717|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##AK291587|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC005921|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC057768|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC062775|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC020756|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##NM_001317|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC119747|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BC029365|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_001318|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022579|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022580|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022581|CSHL1|1444|chorionic somatomammotropin hormone-like 1##M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1	0.991911	CTCF.p2:-9:0.992
chr18	33091598	33091769	reg1021547.p1	4.139	+	AK095502 AK300660 BC039404 NM_001098817 NM_194281	-13758	-	BC130288 BC136314 AF492004 AF533251 AK055775 NM_145756	-134390	-	TSC_hg19_v1_chr18_-_32924421 AK291246 NM_006965	-167262	-	NM_020474 BC047746 U41514 AB529022 X85018	142896	+	NM_001201474 NM_001201475 NM_001201476 NM_031446 BC108730 TSC_hg19_v1_chr18_+_33552656 BC119765 BC119766 AK311536 AF277182 AF277189 BC025950	460984	+	TSC_hg19_v1_chr18_-_33647515 DQ892910 EU176720 AF419845 NM_018170 BC000225 AK314569	555744	-	AK095502|INO80C|125476|INO80 complex subunit C##AK300660|INO80C|125476|INO80 complex subunit C##BC039404|INO80C|125476|INO80 complex subunit C##NM_001098817|INO80C|125476|INO80 complex subunit C##NM_194281|INO80C|125476|INO80 complex subunit C##BC130288|ZNF396|252884|zinc finger protein 396##BC136314|ZNF396|252884|zinc finger protein 396##AF492004|ZNF396|252884|zinc finger protein 396##AF533251|ZNF396|252884|zinc finger protein 396##AK055775|ZNF396|252884|zinc finger protein 396##NM_145756|ZNF396|252884|zinc finger protein 396##AK291246|ZNF24|7572|zinc finger protein 24##NM_006965|ZNF24|7572|zinc finger protein 24##NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21##NM_031446|C18orf21|83608|chromosome 18 open reading frame 21##BC108730|C18orf21|83608|chromosome 18 open reading frame 21##BC119765|C18orf21|83608|chromosome 18 open reading frame 21##BC119766|C18orf21|83608|chromosome 18 open reading frame 21##AF277182|C18orf21|83608|chromosome 18 open reading frame 21##AF277189|C18orf21|83608|chromosome 18 open reading frame 21##BC025950|C18orf21|83608|chromosome 18 open reading frame 21##DQ892910|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##EU176720|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AF419845|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##NM_018170|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC000225|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK314569|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A	0.0	
chr20	42584284	42584378	reg1024609.p2	4.139	+	NM_001098798	-9796	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	-39538	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	-40844	+	AL132999 TSC_hg19_v1_chr20_-_42815818 AK304863	231462	-	BC029957 NM_020433 NM_175913	231886	-	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	255025	-	NM_001098798|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##AL132999|JPH2|57158|junctophilin 2##AK304863|JPH2|57158|junctophilin 2##BC029957|JPH2|57158|junctophilin 2##NM_020433|JPH2|57158|junctophilin 2##NM_175913|JPH2|57158|junctophilin 2##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111	0.0	
chr20	52558701	52558813	reg1031946.p3	4.139	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-347958	-	AF041259 NM_006526	-359122	-	AK302570 NM_001193421	-756936	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	128305	-	AK315220 NM_003657	128546	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	231763	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr3	147334961	147335089	reg1035429.p1	4.139	+	BC104848 BC104850 TSC_hg19_v1_chr3_+_147127864 AB464362	-207163	+	TSC_hg19_v1_chr3_+_147127156 NM_003412	-207854	+	NM_001243256 NM_032153	-210430	-	NM_000685 NM_004835 NM_009585 NM_031850 TSC_hg19_v1_chr3_+_148415688 AK291541 BC068494 BC022447 M87290 S77410 X65699	1080662	+	NM_032049	1112941	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	1210573	+	BC104848|ZIC1|7545|Zic family member 1##BC104850|ZIC1|7545|Zic family member 1##NM_003412|ZIC1|7545|Zic family member 1##NM_001243256|ZIC4|84107|Zic family member 4##NM_032153|ZIC4|84107|Zic family member 4##NM_000685|AGTR1|185|angiotensin II receptor, type 1##NM_004835|AGTR1|185|angiotensin II receptor, type 1##NM_009585|AGTR1|185|angiotensin II receptor, type 1##NM_031850|AGTR1|185|angiotensin II receptor, type 1##AK291541|AGTR1|185|angiotensin II receptor, type 1##BC068494|AGTR1|185|angiotensin II receptor, type 1##BC022447|AGTR1|185|angiotensin II receptor, type 1##M87290|AGTR1|185|angiotensin II receptor, type 1##S77410|AGTR1|185|angiotensin II receptor, type 1##X65699|AGTR1|185|angiotensin II receptor, type 1##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)	0.0	
chr3	5018965	5019134	reg1025300.p1	4.139	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-483853	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-483921	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-484018	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	2067	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	2132	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	2305	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.0	
chr5	171433726	171433800	reg1031174.p1	4.139	+	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	-119	-	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	-235	-	BC006245 TSC_hg19_v1_chr5_+_170847089 AB007422 AB528345 AF211188 AM393798 BT019570 BT019571 DQ892736 DQ895983	-586632	+	BC026213 NM_012300 NM_033644 NM_033645	113	-	AB015718 TSC_hg19_v1_chr5_-_171615170	181375	-	AK307943 TSC_hg19_v1_chr5_-_171615203	181440	-	AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##BC006245|FGF18|8817|fibroblast growth factor 18##AB007422|FGF18|8817|fibroblast growth factor 18##AF211188|FGF18|8817|fibroblast growth factor 18##AM393798|FGF18|8817|fibroblast growth factor 18##BT019570|FGF18|8817|fibroblast growth factor 18##BT019571|FGF18|8817|fibroblast growth factor 18##DQ892736|FGF18|8817|fibroblast growth factor 18##DQ895983|FGF18|8817|fibroblast growth factor 18##BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11##AB015718|STK10|6793|serine/threonine kinase 10##AK307943|STK10|6793|serine/threonine kinase 10	0.0	
chr8	6578463	6578555	reg1037363.p2	4.139	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	-12326	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	-12569	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	-12618	+	AY534243 AY358489 AY534242 NM_207411	114583	-	BC033298 BC047677 X92744 U73945 NM_005218	156974	-	M98331 BC093951 BC093953 BC069667 BC069710 BC069728 BC069769 NM_001926	205076	-	AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AY534243|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY358489|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY534242|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##NM_207411|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##BC033298|DEFB1|1672|defensin, beta 1##BC047677|DEFB1|1672|defensin, beta 1##X92744|DEFB1|1672|defensin, beta 1##U73945|DEFB1|1672|defensin, beta 1##NM_005218|DEFB1|1672|defensin, beta 1##M98331|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093951|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093953|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069667|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069710|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069728|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069769|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##NM_001926|DEFA6|1671|defensin, alpha 6, Paneth cell-specific	0.0	
chrX	65206045	65206157	reg1006075.p1	4.139	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	-318453	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	-318554	+	NM_002444 TSC_hg19_v1_chrX_+_64887520	-318584	+	TSC_hg19_v1_chrX_+_65235302 DQ680071 DQ680072	29190	+	DQ891770 DQ894953 BC010525 AJ132502 AK293215 AK298389 AK075153 AK297050 AK301417 AK075171 NM_001100431 NM_001184830 NM_001184831 NM_007268	53801	-	NM_138737 TSC_hg19_v1_chrX_+_65382512	176374	+	AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##NM_002444|MSN|4478|moesin##DQ891770|VSIG4|11326|V-set and immunoglobulin domain containing 4##DQ894953|VSIG4|11326|V-set and immunoglobulin domain containing 4##BC010525|VSIG4|11326|V-set and immunoglobulin domain containing 4##AJ132502|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK293215|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK298389|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075153|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK297050|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK301417|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075171|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001100431|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184830|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184831|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_007268|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_138737|HEPH|9843|hephaestin	0.0	
chr11	107651685	107651806	reg1033590.p2	4.138	+	BC104185 BC113930 BC113987 BC104150 BC094685 AK312097 BC005261 U96094 NM_003063	-68986	-	TSC_hg19_v1_chr11_+_107462073 BC028725	-189669	+	TSC_hg19_v1_chr11_+_107461998 AK303689 AK054794	-189760	+	CU691672 TSC_hg19_v1_chr11_-_107729514 AK023080 BC048302	77760	-	AK300582 TSC_hg19_v1_chr11_-_107729530 BC039195	77843	-	NM_017515	78168	-	BC104185|SLN|6588|sarcolipin##BC113930|SLN|6588|sarcolipin##BC113987|SLN|6588|sarcolipin##BC104150|SLN|6588|sarcolipin##BC094685|SLN|6588|sarcolipin##AK312097|SLN|6588|sarcolipin##BC005261|SLN|6588|sarcolipin##U96094|SLN|6588|sarcolipin##NM_003063|SLN|6588|sarcolipin##BC028725|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK303689|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK054794|ELMOD1|55531|ELMO/CED-12 domain containing 1##AK023080|SLC35F2|54733|solute carrier family 35, member F2##BC048302|SLC35F2|54733|solute carrier family 35, member F2##AK300582|SLC35F2|54733|solute carrier family 35, member F2##BC039195|SLC35F2|54733|solute carrier family 35, member F2##NM_017515|SLC35F2|54733|solute carrier family 35, member F2	0.992142	CTCF.p2:-46:0.992
chr2	54280119	54280224	reg1023499.p2	4.138	+	TSC_hg19_v1_chr2_-_54198154 AB621805	-82039	-	D38521 TSC_hg19_v1_chr2_-_54197945 AY894756 AY894754 AY894755 NM_014614	-82290	-	AF072693 BC110915 TSC_hg19_v1_chr2_-_54087105 AK314885 NM_001164165 NM_006794	-193053	-	NM_138448 AK307096 BC012290 X84195 TSC_hg19_v1_chr2_+_54342769	62423	+	BC068576 AK097417 NM_001003937	203204	-	AK097617 NM_001100396 BC126244 BC126246 BC144191 BC144192 BC031669	277917	+	D38521|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894756|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894754|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894755|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##NM_014614|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AF072693|GPR75|10936|G protein-coupled receptor 75##BC110915|GPR75-ASB3|100302652|GPR75-ASB3 readthrough##AK314885|GPR75|10936|G protein-coupled receptor 75##NM_001164165|GPR75-ASB3|100302652|GPR75-ASB3 readthrough##NM_006794|GPR75|10936|G protein-coupled receptor 75##NM_138448|ACYP2|98|acylphosphatase 2, muscle type##AK307096|ACYP2|98|acylphosphatase 2, muscle type##BC012290|ACYP2|98|acylphosphatase 2, muscle type##X84195|ACYP2|98|acylphosphatase 2, muscle type##BC068576|TSPYL6|388951|TSPY-like 6##AK097417|TSPYL6|388951|TSPY-like 6##NM_001003937|TSPYL6|388951|TSPY-like 6##AK097617|C2orf73|129852|chromosome 2 open reading frame 73##NM_001100396|C2orf73|129852|chromosome 2 open reading frame 73##BC126244|C2orf73|129852|chromosome 2 open reading frame 73##BC126246|C2orf73|129852|chromosome 2 open reading frame 73##BC144191|C2orf73|129852|chromosome 2 open reading frame 73##BC144192|C2orf73|129852|chromosome 2 open reading frame 73##BC031669|C2orf73|129852|chromosome 2 open reading frame 73	0.741715	CTCF.p2:-9:0.742
chr7	87556361	87556516	reg1024149.p2	4.138	+	AK302010 TSC_hg19_v1_chr7_+_87505937 BC022811 CU690272	-50458	+	BC036045 TSC_hg19_v1_chr7_+_87505839 AK292569 AF160249 BC014909 AF160876 BC035632 AK303175 BC047693	-50634	+	TSC_hg19_v1_chr7_-_87505673 AF125531 NM_018843	-50759	-	TSC_hg19_v1_chr7_+_87563605 BC036029 BC092465 NM_004194 NM_016351 NM_021721 NM_021722 NM_021723 AK291010 BC062433 BC125118 BC125117 AF073291 AF155381 AF155382	7145	+	AB464235 L12387 TSC_hg19_v1_chr7_-_87849352 AK295225 BC011025 M32886	292914	-	TSC_hg19_v1_chr7_-_87849391 AK129770 AK310366 NM_003130	292967	-	AK302010|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC022811|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC036045|DBF4|10926|DBF4 homolog (S. cerevisiae)##AK292569|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF160249|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC014909|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF160876|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC035632|DBF4|10926|DBF4 homolog (S. cerevisiae)##AK303175|DBF4|10926|DBF4 homolog (S. cerevisiae)##BC047693|DBF4|10926|DBF4 homolog (S. cerevisiae)##AF125531|SLC25A40|55972|solute carrier family 25, member 40##NM_018843|SLC25A40|55972|solute carrier family 25, member 40##BC036029|ADAM22|53616|ADAM metallopeptidase domain 22##BC092465|ADAM22|53616|ADAM metallopeptidase domain 22##NM_004194|ADAM22|53616|ADAM metallopeptidase domain 22##NM_016351|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021721|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021722|ADAM22|53616|ADAM metallopeptidase domain 22##NM_021723|ADAM22|53616|ADAM metallopeptidase domain 22##AK291010|ADAM22|53616|ADAM metallopeptidase domain 22##BC062433|ADAM22|53616|ADAM metallopeptidase domain 22##BC125118|ADAM22|53616|ADAM metallopeptidase domain 22##BC125117|ADAM22|53616|ADAM metallopeptidase domain 22##AF073291|ADAM22|53616|ADAM metallopeptidase domain 22##AF155381|ADAM22|53616|ADAM metallopeptidase domain 22##AF155382|ADAM22|53616|ADAM metallopeptidase domain 22##L12387|SRI|6717|sorcin##AK295225|SRI|6717|sorcin##BC011025|SRI|6717|sorcin##M32886|SRI|6717|sorcin##AK129770|SRI|6717|sorcin##AK310366|SRI|6717|sorcin##NM_003130|SRI|6717|sorcin	0.603695	CTCF.p2:10:0.604
chr10	11411620	11411732	reg1034136.p1	4.137	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-204184	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-204230	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-204251	+	NM_001080491	162597	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	241960	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	372722	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.0	
chr10	31321013	31321141	reg1017826.p2	4.137	+	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	-256	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	-32625	-	AF139543 BC066294 NM_183058	-402442	-	TSC_hg19_v1_chr10_+_31607451 BX647794	286359	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	286880	-	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	287056	+	BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1	0.0	
chr10	75679958	75680058	reg1030773.p2	4.137	+	AB208961 TSC_hg19_v1_chr10_+_75673428	-6621	+	BC013575 K03226 M15476 D00244 TSC_hg19_v1_chr10_+_75670948 X02760	-9067	+	NM_001145031 NM_002658 TSC_hg19_v1_chr10_+_75670889 AK297940 AK298560 AK312960	-9131	+	BC049374 NM_001001791	2526	-	TSC_hg19_v1_chr10_+_75757873 AK304823 NM_003373 NM_014000 AK300280 AK296509 BC099919 BC039174 M33308 AB385172 DQ894680	77898	+	TSC_hg19_v1_chr10_-_75910513 BC067127	230504	-	AB208961|PLAU|5328|plasminogen activator, urokinase##BC013575|PLAU|5328|plasminogen activator, urokinase##K03226|PLAU|5328|plasminogen activator, urokinase##M15476|PLAU|5328|plasminogen activator, urokinase##D00244|PLAU|5328|plasminogen activator, urokinase##X02760|PLAU|5328|plasminogen activator, urokinase##NM_001145031|PLAU|5328|plasminogen activator, urokinase##NM_002658|PLAU|5328|plasminogen activator, urokinase##AK297940|PLAU|5328|plasminogen activator, urokinase##AK298560|PLAU|5328|plasminogen activator, urokinase##AK312960|PLAU|5328|plasminogen activator, urokinase##BC049374|C10orf55|414236|chromosome 10 open reading frame 55##NM_001001791|C10orf55|414236|chromosome 10 open reading frame 55##AK304823|VCL|7414|vinculin##NM_003373|VCL|7414|vinculin##NM_014000|VCL|7414|vinculin##AK300280|VCL|7414|vinculin##AK296509|VCL|7414|vinculin##BC039174|VCL|7414|vinculin##M33308|VCL|7414|vinculin##DQ894680|VCL|7414|vinculin##BC067127|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit	0.0	
chr16	68071802	68071983	reg1028523.p1	4.137	+	NM_018380	-14123	-	AK290578 TSC_hg19_v1_chr16_+_68057186 AB101210 AK296663 AK000406 BC006527 NM_017803	-14717	+	TSC_hg19_v1_chr16_-_68057129 BC014517	-14764	-	TSC_hg19_v1_chr16_+_68119279 NM_004555 NM_173163 NM_173165	47362	+	TSC_hg19_v1_chr16_+_68119335 AB209824	47446	+	TSC_hg19_v1_chr16_+_68119350 L41067	47477	+	NM_018380|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##AK290578|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AB101210|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK296663|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK000406|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC006527|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##NM_017803|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC014517|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##NM_004555|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173163|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173165|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##AB209824|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##L41067|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	0.0	
chr2	158269992	158270144	reg1033056.p1	4.137	+	NM_001009959 AK296477	-85912	-	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	-87784	-	BC142676 BC142703 AY277591 NM_014568 AK292154 BC144211	-155775	+	L06633 AB528875 CU690346 AF068836 BC036449 TSC_hg19_v1_chr2_-_158300602 AK312753 NM_004288	30496	-	TSC_hg19_v1_chr2_-_158454049 AF525679 NM_001111031	184007	-	AB590288 CU692676 DQ895570 EU176205 AF525680 AF525681 AY127050 TSC_hg19_v1_chr2_-_158485239	215130	-	NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##L06633|CYTIP|9595|cytohesin 1 interacting protein##AF068836|CYTIP|9595|cytohesin 1 interacting protein##BC036449|CYTIP|9595|cytohesin 1 interacting protein##AK312753|CYTIP|9595|cytohesin 1 interacting protein##NM_004288|CYTIP|9595|cytohesin 1 interacting protein##AF525679|ACVR1C|130399|activin A receptor, type IC##NM_001111031|ACVR1C|130399|activin A receptor, type IC##DQ895570|ACVR1C|130399|activin A receptor, type IC##EU176205|ACVR1C|130399|activin A receptor, type IC##AF525680|ACVR1C|130399|activin A receptor, type IC##AF525681|ACVR1C|130399|activin A receptor, type IC##AY127050|ACVR1C|130399|activin A receptor, type IC	0.0	
chr2	58135903	58136024	reg1033422.p1	4.137	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-1723054	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-1724197	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-1724758	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	137791	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	138025	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	332519	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.0	
chr3	1317299	1317389	reg1032835.p2	4.137	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	-182681	+	AK126307 TSC_hg19_v1_chr3_+_577916	-739429	+	NM_001253388 BC104918 BC143496 BC143498 AB384920	-955932	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	823217	+	NM_001206955	963168	+	AK095729 TSC_hg19_v1_chr3_+_2553286	1235936	+	AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4##AK095729|CNTN4|152330|contactin 4	0.994275	CTCF.p2:-3:0.994
chr3	48646905	48646971	reg1008485.p1	4.137	+	NM_000094 L02870 TSC_hg19_v1_chr3_-_48632733	-14244	-	BC002647 BC022096 NM_033199 TSC_hg19_v1_chr3_-_48601218	-45728	-	TSC_hg19_v1_chr3_-_48598563 AK298732	-48381	-	AB590667 TSC_hg19_v1_chr3_-_48647069 D26485 AK300694 AK302840 AK313090 BC009586 AK129903	124	-	TSC_hg19_v1_chr3_-_48647091 NM_003365	159	-	NM_001008269 BC133034 BC133036	12299	-	NM_000094|COL7A1|1294|collagen, type VII, alpha 1##L02870|COL7A1|1294|collagen, type VII, alpha 1##BC002647|UCN2|90226|urocortin 2##BC022096|UCN2|90226|urocortin 2##NM_033199|UCN2|90226|urocortin 2##AK298732|PFKFB4|5210|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4##D26485|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##AK300694|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##AK302840|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##AK313090|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##BC009586|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##AK129903|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##NM_003365|UQCRC1|7384|ubiquinol-cytochrome c reductase core protein I##NM_001008269|TMEM89|440955|transmembrane protein 89##BC133034|TMEM89|440955|transmembrane protein 89##BC133036|TMEM89|440955|transmembrane protein 89	0.0	
chr8	27323390	27323571	reg1003563.p2	4.137	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-140403	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-140428	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-140463	+	AK314787 U62431 NM_000742	13291	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	25178	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	148725	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	0.0	
chr10	63760091	63760271	reg1025255.p2	4.136	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-98750	+	NM_032199	-99169	+	BC041932 NM_173554	-337463	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	48915	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	268358	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	373862	+	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365	0.0	
chr11	18415950	18416071	reg1034681.p1	4.136	+	AK127204 AK299621 TSC_hg19_v1_chr11_+_18344113 AK299730 BC000365 BC004452 AK312974 M95809	-71830	+	TSC_hg19_v1_chr11_+_18343825 NM_001142307 NM_005316 AK027003	-72155	+	BC033640 TSC_hg19_v1_chr11_-_18343678 AK291663 AK292436 AB023234 AF534400 AF534401 AF534402 NM_007216 NM_181507 NM_181508 AY142148	-72300	-	TSC_hg19_v1_chr11_+_18416105 NM_001135239 NM_001165415 NM_001165416 NM_005566	1	+	AK130035 TSC_hg19_v1_chr11_+_18416109 AK130587 AK296667 AK026515 AK223078 AK296089 AK307477 BC067223 X02152	98	+	AK130105 TSC_hg19_v1_chr11_+_18416111	101	+	AK127204|GTF2H1|2965|general transcription factor IIH, polypeptide 1, 62kDa##AK299621|GTF2H1|2965|general transcription factor IIH, polypeptide 1, 62kDa##AK299730|GTF2H1|2965|general transcription factor IIH, polypeptide 1, 62kDa##BC000365|GTF2H1|2965|general transcription factor IIH, polypeptide 1, 62kDa##BC004452|GTF2H1|2965|general transcription factor IIH, polypeptide 1, 62kDa##AK312974|GTF2H1|2965|general transcription factor IIH, polypeptide 1, 62kDa##M95809|GTF2H1|2965|general transcription factor IIH, polypeptide 1, 62kDa##NM_001142307|GTF2H1|2965|general transcription factor IIH, polypeptide 1, 62kDa##NM_005316|GTF2H1|2965|general transcription factor IIH, polypeptide 1, 62kDa##AK027003|GTF2H1|2965|general transcription factor IIH, polypeptide 1, 62kDa##BC033640|HPS5|11234|Hermansky-Pudlak syndrome 5##AK291663|HPS5|11234|Hermansky-Pudlak syndrome 5##AK292436|HPS5|11234|Hermansky-Pudlak syndrome 5##AB023234|HPS5|11234|Hermansky-Pudlak syndrome 5##AF534400|HPS5|11234|Hermansky-Pudlak syndrome 5##AF534401|HPS5|11234|Hermansky-Pudlak syndrome 5##AF534402|HPS5|11234|Hermansky-Pudlak syndrome 5##NM_007216|HPS5|11234|Hermansky-Pudlak syndrome 5##NM_181507|HPS5|11234|Hermansky-Pudlak syndrome 5##NM_181508|HPS5|11234|Hermansky-Pudlak syndrome 5##NM_001135239|LDHA|3939|lactate dehydrogenase A##NM_001165415|LDHA|3939|lactate dehydrogenase A##NM_001165416|LDHA|3939|lactate dehydrogenase A##NM_005566|LDHA|3939|lactate dehydrogenase A##AK130035|LDHA|3939|lactate dehydrogenase A##AK130587|LDHA|3939|lactate dehydrogenase A##AK296667|LDHA|3939|lactate dehydrogenase A##AK026515|LDHA|3939|lactate dehydrogenase A##AK223078|LDHA|3939|lactate dehydrogenase A##AK296089|LDHA|3939|lactate dehydrogenase A##AK307477|LDHA|3939|lactate dehydrogenase A##BC067223|LDHA|3939|lactate dehydrogenase A##X02152|LDHA|3939|lactate dehydrogenase A##AK130105|LDHA|3939|lactate dehydrogenase A	0.0	
chr1	22331805	22331968	reg1035411.p1	4.136	+	BC005918 BC015103 D00306 NM_005747 BC007028 AK225620 AK308514 BC008383 CU675183 CU678941 DQ893182 DQ896490	-3729	+	NM_007352 AK092382 AK308518 AX747509 BC005216 M18692 AK315798 AK308510 M16630	-28407	+	TSC_hg19_v1_chr1_-_22263804 X62515 NM_005529 M85289	-68120	-	TSC_hg19_v1_chr1_+_22352003 AF161506 BC016053	20126	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	47284	+	TSC_hg19_v1_chr1_+_22379812 AL121737	47919	+	BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A##D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B##M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A##M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B##X62515|HSPG2|3339|heparan sulfate proteoglycan 2##NM_005529|HSPG2|3339|heparan sulfate proteoglycan 2##M85289|HSPG2|3339|heparan sulfate proteoglycan 2##AF161506|LINC00339|29092|long intergenic non-protein coding RNA 339##BC016053|LINC00339|29092|long intergenic non-protein coding RNA 339##NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)	0.740351	CTCF.p2:-39:0.740
chr12	46568166	46568314	reg1035754.p2	4.136	+	TSC_hg19_v1_chr12_-_46385857 AK026473	-182365	-	TSC_hg19_v1_chr12_-_46384378 NM_004719	-183815	-	AK096682 TSC_hg19_v1_chr12_-_46384348 AF030234	-183893	-	AK074851 CU679761 DQ891017 EU176550 AK074949 AK313731 TSC_hg19_v1_chr12_-_46633674	65373	-	TSC_hg19_v1_chr12_-_46662567 AF247166	94326	-	TSC_hg19_v1_chr12_-_46662776 BC010620 BX648676	94503	-	AK026473|SCAF11|9169|SR-related CTD-associated factor 11##NM_004719|SCAF11|9169|SR-related CTD-associated factor 11##AK096682|SCAF11|9169|SR-related CTD-associated factor 11##AF030234|SCAF11|9169|SR-related CTD-associated factor 11##AK074851|SLC38A1|81539|solute carrier family 38, member 1##DQ891017|SLC38A1|81539|solute carrier family 38, member 1##EU176550|SLC38A1|81539|solute carrier family 38, member 1##AK074949|SLC38A1|81539|solute carrier family 38, member 1##AK313731|SLC38A1|81539|solute carrier family 38, member 1##AF247166|SLC38A1|81539|solute carrier family 38, member 1##BC010620|SLC38A1|81539|solute carrier family 38, member 1##BX648676|SLC38A1|81539|solute carrier family 38, member 1	0.0	
chr14	93629997	93630113	reg1034344.p1	4.136	+	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	-47841	-	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	-48464	-	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-240458	+	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	21145	-	TSC_hg19_v1_chr14_-_93651243 NM_022151	21190	-	AK315522 TSC_hg19_v1_chr14_-_93651261	21213	-	BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1##NM_022151|MOAP1|64112|modulator of apoptosis 1##AK315522|MOAP1|64112|modulator of apoptosis 1	0.0	
chr17	78266623	78266714	reg1034218.p1	4.136	+	TSC_hg19_v1_chr17_+_78237445 CU691854	-29234	+	TSC_hg19_v1_chr17_+_78234657 AB537889 BC036891 NM_020914 NM_020954 AL832920 BC040341 AF397204 AF397205	-31983	+	TSC_hg19_v1_chr17_+_78194101 NM_001166347 NM_001166348 NM_001166349 NM_173626 AJ544073 AK027293 AK075248 AK315132 AL833468 BC035900 AF345195	-72490	+	TSC_hg19_v1_chr17_+_78356710 AK023871	90102	+	TSC_hg19_v1_chr17_-_78388896 AK125341	122209	-	TSC_hg19_v1_chr17_+_78388966 AK092539 AK096344 AX747589 NM_001164637 NM_001164638 NM_173627 BC059781	122292	+	AB537889|RNF213|57674|ring finger protein 213##BC036891|RNF213|57674|ring finger protein 213##NM_020914|RNF213|57674|ring finger protein 213##NM_020954|RNF213|57674|ring finger protein 213##AL832920|RNF213|57674|ring finger protein 213##BC040341|RNF213|57674|ring finger protein 213##AF397204|RNF213|57674|ring finger protein 213##AF397205|RNF213|57674|ring finger protein 213##NM_001166347|SLC26A11|284129|solute carrier family 26, member 11##NM_001166348|SLC26A11|284129|solute carrier family 26, member 11##NM_001166349|SLC26A11|284129|solute carrier family 26, member 11##NM_173626|SLC26A11|284129|solute carrier family 26, member 11##AJ544073|SLC26A11|284129|solute carrier family 26, member 11##AK027293|SLC26A11|284129|solute carrier family 26, member 11##AK075248|SLC26A11|284129|solute carrier family 26, member 11##AK315132|SLC26A11|284129|solute carrier family 26, member 11##AL833468|SLC26A11|284129|solute carrier family 26, member 11##BC035900|SLC26A11|284129|solute carrier family 26, member 11##AF345195|SLC26A11|284129|solute carrier family 26, member 11##AK023871|RNF213|57674|ring finger protein 213##AK125341|LOC100294362|100294362|uncharacterized LOC100294362##AK092539|ENDOV|284131|endonuclease V##AK096344|ENDOV|284131|endonuclease V##NM_001164637|ENDOV|284131|endonuclease V##NM_001164638|ENDOV|284131|endonuclease V##NM_173627|ENDOV|284131|endonuclease V##BC059781|ENDOV|284131|endonuclease V	0.985635	CTCF.p2:21:0.986
chr2	215175237	215175361	reg1033453.p1	4.136	+	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	-1026142	+	AK124960 NM_001242575	-1026371	-	BC028936 NM_001079526	-1158967	-	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	101161	+	AB590656 JF790283 JF790285 JF790287 TSC_hg19_v1_chr2_-_215674408 BC126426 BC126428 AX794378 JF790280 JF790281 JF790282 JF790284 U76638 AK314260 AK301843 JF790286 AK223409 NM_000465	499060	-	AY033486 NM_015657	721510	-	BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##JF790283|BARD1|580|BRCA1 associated RING domain 1##JF790285|BARD1|580|BRCA1 associated RING domain 1##JF790287|BARD1|580|BRCA1 associated RING domain 1##BC126426|BARD1|580|BRCA1 associated RING domain 1##BC126428|BARD1|580|BRCA1 associated RING domain 1##AX794378|BARD1|580|BRCA1 associated RING domain 1##JF790280|BARD1|580|BRCA1 associated RING domain 1##JF790281|BARD1|580|BRCA1 associated RING domain 1##JF790282|BARD1|580|BRCA1 associated RING domain 1##JF790284|BARD1|580|BRCA1 associated RING domain 1##U76638|BARD1|580|BRCA1 associated RING domain 1##AK314260|BARD1|580|BRCA1 associated RING domain 1##AK301843|BARD1|580|BRCA1 associated RING domain 1##JF790286|BARD1|580|BRCA1 associated RING domain 1##AK223409|BARD1|580|BRCA1 associated RING domain 1##NM_000465|BARD1|580|BRCA1 associated RING domain 1##AY033486|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_015657|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12	0.983995	CTCF.p2:-51:0.984
chr3	81222814	81222947	reg1038465.p1	4.136	+	NM_002941	-1405822	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-2154293	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-2555895	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	587817	-	TSC_hg19_v1_chr3_-_81810798 AK312245	587918	-	TSC_hg19_v1_chr3_-_81810802 AK297939	587925	-	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.21931	CTCF.p2:-3:0.219
chr5	167503844	167503945	reg1029801.p1	4.136	+	HE578282 HE578283 NM_001122679	-792052	+	TSC_hg19_v1_chr5_+_162932624 AK312365 NM_013283 AB073390 AL136664 BC093030 AK096178 BC066645 CU688168 AB528179 AM393097 AM393737 AF182814 AF113225	-4571251	+	DQ395260 DQ413183 NM_182796 AJ243721 AK291919 TSC_hg19_v1_chr5_+_162930290 BC005218 AY358695	-4573606	+	TSC_hg19_v1_chr5_+_167718649 NM_001161661 NM_001161662 NM_015238 AF506799 AK296323 AB527269	214927	+	TSC_hg19_v1_chr5_+_167913482 NM_002887 AK314795 BC000528 BC014619 AK222797 S80343 AK302161 AB527674 BT007394 CU674256	409580	+	TSC_hg19_v1_chr5_+_167956546 AX721195	452723	+	NM_001122679|ODZ2|57451|odz, odd Oz/ten-m homolog 2 (Drosophila)##AK312365|MAT2B|27430|methionine adenosyltransferase II, beta##NM_013283|MAT2B|27430|methionine adenosyltransferase II, beta##AB073390|MAT2B|27430|methionine adenosyltransferase II, beta##AL136664|MAT2B|27430|methionine adenosyltransferase II, beta##BC093030|MAT2B|27430|methionine adenosyltransferase II, beta##AK096178|MAT2B|27430|methionine adenosyltransferase II, beta##BC066645|MAT2B|27430|methionine adenosyltransferase II, beta##AM393097|MAT2B|27430|methionine adenosyltransferase II, beta##AM393737|MAT2B|27430|methionine adenosyltransferase II, beta##AF182814|MAT2B|27430|methionine adenosyltransferase II, beta##AF113225|MAT2B|27430|methionine adenosyltransferase II, beta##DQ395260|MAT2B|27430|methionine adenosyltransferase II, beta##DQ413183|MAT2B|27430|methionine adenosyltransferase II, beta##NM_182796|MAT2B|27430|methionine adenosyltransferase II, beta##AJ243721|MAT2B|27430|methionine adenosyltransferase II, beta##AK291919|MAT2B|27430|methionine adenosyltransferase II, beta##BC005218|MAT2B|27430|methionine adenosyltransferase II, beta##AY358695|MAT2B|27430|methionine adenosyltransferase II, beta##NM_001161661|WWC1|23286|WW and C2 domain containing 1##NM_001161662|WWC1|23286|WW and C2 domain containing 1##NM_015238|WWC1|23286|WW and C2 domain containing 1##AF506799|WWC1|23286|WW and C2 domain containing 1##AK296323|WWC1|23286|WW and C2 domain containing 1##NM_002887|RARS|5917|arginyl-tRNA synthetase##AK314795|RARS|5917|arginyl-tRNA synthetase##BC000528|RARS|5917|arginyl-tRNA synthetase##BC014619|RARS|5917|arginyl-tRNA synthetase##AK222797|RARS|5917|arginyl-tRNA synthetase##S80343|RARS|5917|arginyl-tRNA synthetase##AK302161|RARS|5917|arginyl-tRNA synthetase##BT007394|RARS|5917|arginyl-tRNA synthetase	0.987325	CTCF.p2:28:0.987
chr7	20480473	20480582	reg1036370.p1	4.136	+	BC002630 NM_002214 M73780	-109793	+	AK295044 TSC_hg19_v1_chr7_+_20370337	-110190	+	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	-223547	-	AB353947 NM_001163941 AY230001	174770	+	AY851364 BC110370 NM_001163942 NM_001163993 NM_178559 BC044248 AY090613 AY234788 AY851365 BC104894 BC104920	206564	+	TSC_hg19_v1_chr7_-_20825382 AB464710	344855	-	BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8##AK295044|ITGB8|3696|integrin, beta 8##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##AB353947|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163941|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY230001|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY851364|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC110370|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163942|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_001163993|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##NM_178559|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC044248|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY090613|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY234788|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##AY851365|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC104894|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5##BC104920|ABCB5|340273|ATP-binding cassette, sub-family B (MDR/TAP), member 5	0.975235	CTCF.p2:5:0.975
chr10	103048101	103048227	reg1029445.p1	4.135	+	BC136321 BC069156 NM_006562 X90828	-59462	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-156986	+	BC019674 NM_001085398	-157262	-	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	65708	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	299765	-	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	299845	-	BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda	0.949962	CTCF.p2:5:0.950
chr13	21100548	21100656	reg1032586.p1	4.135	+	BC119660 BC119661 TSC_hg19_v1_chr13_-_21099959 AF160216 AF077049 AF087898 AK024041 BC071810 NM_015974	-629	-	NM_001110219 NM_001110220 NM_001110221	-294069	-	NM_006783	-295231	-	NM_006531 NM_175605 U20362 TSC_hg19_v1_chr13_+_21141275 BC030776	40639	+	TSC_hg19_v1_chr13_+_21141298 AK300769 AK310223 AK308281 AK303853 BC059357	40704	+	TSC_hg19_v1_chr13_+_21183940 BC039413	83375	+	BC119660|CRYL1|51084|crystallin, lambda 1##BC119661|CRYL1|51084|crystallin, lambda 1##AF160216|CRYL1|51084|crystallin, lambda 1##AF077049|CRYL1|51084|crystallin, lambda 1##AF087898|CRYL1|51084|crystallin, lambda 1##AK024041|CRYL1|51084|crystallin, lambda 1##BC071810|CRYL1|51084|crystallin, lambda 1##NM_015974|CRYL1|51084|crystallin, lambda 1##NM_001110219|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110220|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110221|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006531|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##NM_175605|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##U20362|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC030776|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK300769|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK310223|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK308281|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK303853|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC059357|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)	0.0	
chr15	31727158	31727338	reg1009292.p1	4.135	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-107910	+	NM_001243538	-204199	-	GQ502181 HM135791 NM_001252020	-273820	-	AJ430383 NM_130901	220293	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	435581	-	TSC_hg19_v1_chr15_-_32162898 AK126002	435695	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr16	67312631	67312811	reg1010738.p1	4.135	+	TSC_hg19_v1_chr16_+_67312688 BC001520	-7	+	TSC_hg19_v1_chr16_+_67312061 NM_001129727 BC082974 AK024475	-611	+	AB197663 AB197664 NM_015432	-1309	+	TSC_hg19_v1_chr16_+_67312980 NM_001129728	293	+	AK308298 TSC_hg19_v1_chr16_+_67313229	464	+	TSC_hg19_v1_chr16_+_67313455 BC063501 NM_001129729 NM_001129731 BC054486	721	+	BC001520|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129727|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC082974|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##AK024475|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##AB197663|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##AB197664|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_015432|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129728|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##AK308298|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC063501|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129729|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129731|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC054486|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4	0.776073	CTCF.p2:-32:0.776
chr17	27038671	27038849	reg1030502.p1	4.135	+	TSC_hg19_v1_chr17_+_26989239 BC150268 D79984 NM_003170 BC136522 BC136524	-49493	+	TSC_hg19_v1_chr17_+_26989222 AL833607	-49551	+	TSC_hg19_v1_chr17_-_26989199 NM_006923	-49564	-	BC029574 NM_152465	111	-	TSC_hg19_v1_chr17_-_27044728 BC016841 AK074689 NM_001144942 NM_031934	6057	-	AF327350 AK297850 AK027312 AJ277106 AK304633 BC066904 NM_001142624 NM_001142625 NM_001144943	6468	-	BC150268|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)##D79984|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)##NM_003170|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)##BC136522|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)##BC136524|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)##AL833607|SUPT6H|6830|suppressor of Ty 6 homolog (S. cerevisiae)##NM_006923|SDF2|6388|stromal cell-derived factor 2##BC029574|PROCA1|147011|protein interacting with cyclin A1##NM_152465|PROCA1|147011|protein interacting with cyclin A1##BC016841|RAB34|83871|RAB34, member RAS oncogene family##AK074689|RAB34|83871|RAB34, member RAS oncogene family##NM_001144942|RAB34|83871|RAB34, member RAS oncogene family##NM_031934|RAB34|83871|RAB34, member RAS oncogene family##AF327350|RAB34|83871|RAB34, member RAS oncogene family##AK297850|RAB34|83871|RAB34, member RAS oncogene family##AK027312|RAB34|83871|RAB34, member RAS oncogene family##AJ277106|RAB34|83871|RAB34, member RAS oncogene family##AK304633|RAB34|83871|RAB34, member RAS oncogene family##BC066904|RAB34|83871|RAB34, member RAS oncogene family##NM_001142624|RAB34|83871|RAB34, member RAS oncogene family##NM_001142625|RAB34|83871|RAB34, member RAS oncogene family##NM_001144943|RAB34|83871|RAB34, member RAS oncogene family	0.0	
chr18	60818260	60818440	reg1035532.p1	4.135	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-22415	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-434042	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-434424	+	BC027258 NM_000633 NM_000657	168210	-	TSC_hg19_v1_chr18_-_60986977 X06487	168643	-	TSC_hg19_v1_chr18_-_60987309 M13994	168936	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr22	46692487	46692638	reg1029418.p1	4.135	+	TSC_hg19_v1_chr22_+_46663916 AK000706 BC018918 CU676334	-28647	+	TSC_hg19_v1_chr22_+_46663880 NM_017931 AK300606	-28704	+	AF116458 NM_006071 BC027601	-33328	-	NM_016426 BC075828 AK303087 AK025563 AK222806 AK315550 TSC_hg19_v1_chr22_+_46692850	193	+	NM_018006 AY062123 DQ309998 DQ309999 DQ310000	38747	+	TSC_hg19_v1_chr22_+_46731615 AB178028 AK001002 AK295173 AK290712 BC066593 BC080631 CR456445 BC027991 BC012076 AB463324 CU013043 CU013331	39067	+	AK000706|TTC38|55020|tetratricopeptide repeat domain 38##BC018918|TTC38|55020|tetratricopeptide repeat domain 38##NM_017931|TTC38|55020|tetratricopeptide repeat domain 38##AK300606|TTC38|55020|tetratricopeptide repeat domain 38##AF116458|PKDREJ|10343|polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)##NM_006071|PKDREJ|10343|polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)##BC027601|PKDREJ|10343|polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)##NM_016426|GTSE1|51512|G-2 and S-phase expressed 1##BC075828|GTSE1|51512|G-2 and S-phase expressed 1##AK303087|GTSE1|51512|G-2 and S-phase expressed 1##AK025563|GTSE1|51512|G-2 and S-phase expressed 1##AK222806|GTSE1|51512|G-2 and S-phase expressed 1##AK315550|GTSE1|51512|G-2 and S-phase expressed 1##NM_018006|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AY062123|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ309998|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ309999|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##DQ310000|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AB178028|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK001002|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK295173|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK290712|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC066593|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC080631|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456445|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC027991|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC012076|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013043|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013331|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	0.04151	
chr5	73690491	73690671	reg1032765.p1	4.135	+	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	-581231	+	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	-768596	+	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	-828999	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	245882	-	AK096578 NM_003633	246667	-	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	290427	+	AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)	0.857175	CTCF.p2:-20:0.673
chr6	160400379	160400510	reg1026792.p3	4.135	+	TSC_hg19_v1_chr6_+_160390137 NM_000876 Y00285 J03528	-10311	+	BC069142 BC069581 BC110454 NM_002377 CU686912 CR542261	-72465	+	TSC_hg19_v1_chr6_+_160221313 AK097559 NM_173516 AK093139 AX747947 BC112246	-179101	+	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	142470	+	CU689064 BC039899 AK290787 X98333 AB075951 BC030978 NM_003058	279431	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	368950	+	NM_000876|IGF2R|3482|insulin-like growth factor 2 receptor##Y00285|IGF2R|3482|insulin-like growth factor 2 receptor##J03528|IGF2R|3482|insulin-like growth factor 2 receptor##BC069142|MAS1|4142|MAS1 oncogene##BC069581|MAS1|4142|MAS1 oncogene##BC110454|MAS1|4142|MAS1 oncogene##NM_002377|MAS1|4142|MAS1 oncogene##CR542261|MAS1|4142|MAS1 oncogene##AK097559|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_173516|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##AK093139|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##BC112246|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC039899|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AK290787|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##X98333|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AB075951|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC030978|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003058|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3	0.0	
chrX	151804530	151804616	reg1029730.p2	4.135	+	S62908 TSC_hg19_v1_chrX_-_151619798 BC028629 NM_000808	-184824	-	AY522506 BC004105 AK314161 NM_001011543 NM_001204811 NM_001251828 NM_021048	-497569	-	BC109187 NM_021049	-518163	-	AF189259 BC109210 BC109211 NM_018558 AF144648	2080	+	NM_005363 NM_175868 AK289437 BC067731 BC041599 BC109188 BX640600	62698	+	NM_001129826 BC119734 BC119735 AF080246 AF136715 NM_001080848 NM_001129828 NM_004909	73134	-	S62908|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3##BC028629|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3##NM_000808|GABRA3|2556|gamma-aminobutyric acid (GABA) A receptor, alpha 3##BC004105|MAGEA10|4109|melanoma antigen family A, 10##AK314161|MAGEA10|4109|melanoma antigen family A, 10##NM_001011543|MAGEA10|4109|melanoma antigen family A, 10##NM_001204811|MAGEA10-MAGEA5|100533997|MAGEA10-MAGEA5 readthrough##NM_001251828|MAGEA10|4109|melanoma antigen family A, 10##NM_021048|MAGEA10|4109|melanoma antigen family A, 10##BC109187|MAGEA5|4104|melanoma antigen family A, 5##NM_021049|MAGEA5|4104|melanoma antigen family A, 5##AF189259|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##BC109210|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##BC109211|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##NM_018558|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##AF144648|GABRQ|55879|gamma-aminobutyric acid (GABA) receptor, theta##NM_005363|MAGEA6|4105|melanoma antigen family A, 6##NM_175868|MAGEA6|4105|melanoma antigen family A, 6##AK289437|MAGEA6|4105|melanoma antigen family A, 6##BC067731|MAGEA6|4105|melanoma antigen family A, 6##BC041599|MAGEA6|4105|melanoma antigen family A, 6##BC109188|MAGEA2|4101|melanoma antigen family A, 2##BX640600|MAGEA6|4105|melanoma antigen family A, 6##NM_001129826|CSAG3|389903|CSAG family, member 3##BC119734|CSAG3|389903|CSAG family, member 3##BC119735|CSAG3|389903|CSAG family, member 3##AF080246|CSAG3|389903|CSAG family, member 3##AF136715|CSAG3|389903|CSAG family, member 3##NM_001080848|CSAG2|728461|CSAG family, member 2##NM_001129828|CSAG3|389903|CSAG family, member 3##NM_004909|CSAG2|728461|CSAG family, member 2	0.928776	CTCF.p2:-6:0.929
chr11	258251	258372	reg1024938.p1	4.134	+	TSC_hg19_v1_chr11_+_236975 AK295944 AK094775 AK222895 AB009398 BC001100 AF083245 AK307447 AF107837 BC001747 BX647314 AB528493 DQ892171 DQ895365 AF086708 BT007307	-21304	+	AK316175 TSC_hg19_v1_chr11_-_236906 AK308681	-21422	-	NM_002817 NM_175932	-21504	+	AF479748 AY154461 NM_138329	20258	+	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	30831	+	BC150562 BC150563 NM_001025295	41210	-	AK295944|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK094775|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK222895|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AB009398|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001100|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF083245|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK307447|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF107837|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001747|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BX647314|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ892171|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ895365|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF086708|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BT007307|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK316175|SIRT3|23410|sirtuin 3##AK308681|SIRT3|23410|sirtuin 3##NM_002817|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##NM_175932|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF479748|NLRP6|171389|NLR family, pyrin domain containing 6##AY154461|NLRP6|171389|NLR family, pyrin domain containing 6##NM_138329|NLRP6|171389|NLR family, pyrin domain containing 6##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5	0.21281	CTCF.p2:13:0.213
chr12	90102931	90103018	reg1030983.p2	4.134	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-287	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-53123	-	AK297677 NM_001199781 NM_001199782 NM_172240	-182936	-	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	571	+	BC026075 BC024183 BC027600 BC034491 NM_152638	1245977	-	U59111 TSC_hg19_v1_chr12_-_91398750	1295773	-	BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##AK297677|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199781|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199782|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_172240|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan	0.0	
chr17	63096095	63096246	reg1007865.p1	4.134	+	TSC_hg19_v1_chr17_-_63052903 AK301699 NM_006572	-43269	-	BC011925 TSC_hg19_v1_chr17_-_63052851	-43337	-	TSC_hg19_v1_chr17_-_63052756 L22075 BC036756	-43410	-	NM_001081955 NM_001165933 NM_003835 TSC_hg19_v1_chr17_+_63133479	37300	+	TSC_hg19_v1_chr17_+_63133501 AK309061 AK290535 BC022504 AK301719 AF071476 AK289876 AF493933 AY585191	37409	+	BC006295 TSC_hg19_v1_chr17_-_63556453	460305	-	AK301699|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_006572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##L22075|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC036756|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##NM_001081955|RGS9|8787|regulator of G-protein signaling 9##NM_001165933|RGS9|8787|regulator of G-protein signaling 9##NM_003835|RGS9|8787|regulator of G-protein signaling 9##AK309061|RGS9|8787|regulator of G-protein signaling 9##AK290535|RGS9|8787|regulator of G-protein signaling 9##BC022504|RGS9|8787|regulator of G-protein signaling 9##AK301719|RGS9|8787|regulator of G-protein signaling 9##AF071476|RGS9|8787|regulator of G-protein signaling 9##AK289876|RGS9|8787|regulator of G-protein signaling 9##AF493933|RGS9|8787|regulator of G-protein signaling 9##AY585191|RGS9|8787|regulator of G-protein signaling 9##BC006295|AXIN2|8313|axin 2	0.0	
chr20	45196474	45196558	reg1030445.p2	4.134	+	NM_080721 TSC_hg19_v1_chr20_-_45179294	-17263	-	AK001331 AK095611 BC024177 NM_018102 NM_199441 BC026321 TSC_hg19_v1_chr20_-_45142199	-54321	-	AL831934 TSC_hg19_v1_chr20_-_45087948	-108585	-	DQ892655 DQ895894 AF154121 AY072810 AK293902 AK056713 AK295748 AK315131 BC035966 NM_001193339 NM_001193342 NM_022829 TSC_hg19_v1_chr20_-_45280099	83565	-	TSC_hg19_v1_chr20_-_45313125 AK096658 NM_001011554 NM_001193340	116608	-	TSC_hg19_v1_chr20_-_45318084 BC010637 BC035461 AB587589 AK096502 BC066309 BC019621 AK315182	121451	-	NM_080721|C20orf123|128506|chromosome 20 open reading frame 123##AK001331|ZNF334|55713|zinc finger protein 334##AK095611|ZNF334|55713|zinc finger protein 334##BC024177|ZNF334|55713|zinc finger protein 334##NM_018102|ZNF334|55713|zinc finger protein 334##NM_199441|ZNF334|55713|zinc finger protein 334##BC026321|ZNF334|55713|zinc finger protein 334##AL831934|ZNF663|100130934|zinc finger protein 663##DQ892655|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##DQ895894|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AF154121|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AY072810|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK293902|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK056713|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK295748|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK315131|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##BC035966|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193339|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193342|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_022829|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK096658|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001011554|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193340|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##BC010637|TP53RK|112858|TP53 regulating kinase##BC035461|TP53RK|112858|TP53 regulating kinase##AK096502|TP53RK|112858|TP53 regulating kinase##BC066309|TP53RK|112858|TP53 regulating kinase##BC019621|TP53RK|112858|TP53 regulating kinase##AK315182|TP53RK|112858|TP53 regulating kinase	0.010814	
chr2	137181345	137181460	reg1002249.p2	4.134	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-305726	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-307604	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-438186	-	TSC_hg19_v1_chr2_+_137523114 AK299929	341714	+	NM_001080427	567059	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1540532	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.0	
chr3	127174343	127174440	reg1002253.p1	4.134	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	-262397	+	AB385178 NM_032242 X87832	-466951	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-751314	+	AB037108 NM_016372	124888	-	TSC_hg19_v1_chr3_-_127309338 BC017058	134953	-	BC050711 NM_001136053 AF289568 TSC_hg19_v1_chr3_-_127309565 NM_001142646	135142	-	AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC017058|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC050711|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001136053|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##AF289568|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001142646|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	0.0	
chr4	36184956	36185054	reg1029570.p1	4.134	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-5462546	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-5462811	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-5463006	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	61032	-	AK131492 NM_001136536 AK304357 AK316523	98241	+	BC157885 NM_001170700	100638	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.544598	CTCF.p2:-43:0.545
chr6	41437842	41437939	reg1032376.p2	4.134	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-134324	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-183466	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-241822	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	76269	+	TSC_hg19_v1_chr6_+_41514342 BC052803	76447	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	168332	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	0.0	
chr12	45609247	45609405	reg1028053.p1	4.133	+	AK131230 NM_001004329 TSC_hg19_v1_chr12_-_45444883	-164444	-	AK295125 NM_001145110	-301616	-	AK299733 NM_001145107	-338694	-	TSC_hg19_v1_chr12_+_45609769 AK126409 NM_001025356 NM_001142679 NM_001204803 AK310641	458	+	TSC_hg19_v1_chr12_+_45609845 AK303996	523	+	TSC_hg19_v1_chr12_+_45609867 AK302819 NM_001142680	545	+	AK131230|DBX2|440097|developing brain homeobox 2##NM_001004329|DBX2|440097|developing brain homeobox 2##AK295125|NELL2|4753|NEL-like 2 (chicken)##NM_001145110|NELL2|4753|NEL-like 2 (chicken)##AK299733|NELL2|4753|NEL-like 2 (chicken)##NM_001145107|NELL2|4753|NEL-like 2 (chicken)##AK126409|ANO6|196527|anoctamin 6##NM_001025356|ANO6|196527|anoctamin 6##NM_001142679|ANO6|196527|anoctamin 6##NM_001204803|ANO6|196527|anoctamin 6##AK310641|ANO6|196527|anoctamin 6##AK303996|ANO6|196527|anoctamin 6##AK302819|ANO6|196527|anoctamin 6##NM_001142680|ANO6|196527|anoctamin 6	0.0	
chr14	21131409	21131589	reg1005606.p2	4.133	+	NM_001001968	-21650	-	HQ258082 AY665807 BC130347 BC130349 NM_001024822	-72569	-	BX161458 NM_145250	-73097	-	FJ236304 NM_001145 AK092422 NM_002937	20854	+	TSC_hg19_v1_chr14_+_21152776 AK313989 BC015520 BC054880 BX248010	21277	+	TSC_hg19_v1_chr14_+_21156940 NM_001097577 NM_194431 BC062698 BC020704	25433	+	NM_001001968|OR6S1|341799|olfactory receptor, family 6, subfamily S, member 1##HQ258082|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##AY665807|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BC130347|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BC130349|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##NM_001024822|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BX161458|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##NM_145250|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5##AK092422|RNASE4|6038|ribonuclease, RNase A family, 4##NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4##AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC015520|RNASE4|6038|ribonuclease, RNase A family, 4##BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BX248010|RNASE4|6038|ribonuclease, RNase A family, 4##NM_001097577|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_194431|RNASE4|6038|ribonuclease, RNase A family, 4##BC062698|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC020704|ANG|283|angiogenin, ribonuclease, RNase A family, 5	0.0	
chr17	5322226	5322346	reg1036747.p1	4.133	+	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	-136620	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	-184185	-	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-226906	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	639	-	AY775314 AY775315 AY775316 AY775317 AY775318 AY775319 AY775320 AY775321 AY775323 NM_001033002 NM_001160243 NM_001160244 NM_001160246 NM_001160266 NM_001160267	674	+	TSC_hg19_v1_chr17_-_5322983 NM_002532	734	-	NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa##AY775314|RPAIN|84268|RPA interacting protein##AY775315|RPAIN|84268|RPA interacting protein##AY775316|RPAIN|84268|RPA interacting protein##AY775317|RPAIN|84268|RPA interacting protein##AY775318|RPAIN|84268|RPA interacting protein##AY775319|RPAIN|84268|RPA interacting protein##AY775320|RPAIN|84268|RPA interacting protein##AY775321|RPAIN|84268|RPA interacting protein##AY775323|RPAIN|84268|RPA interacting protein##NM_001033002|RPAIN|84268|RPA interacting protein##NM_001160243|RPAIN|84268|RPA interacting protein##NM_001160244|RPAIN|84268|RPA interacting protein##NM_001160246|RPAIN|84268|RPA interacting protein##NM_001160266|RPAIN|84268|RPA interacting protein##NM_001160267|RPAIN|84268|RPA interacting protein##NM_002532|NUP88|4927|nucleoporin 88kDa	0.0	
chr20	11524571	11524752	reg1003104.p1	4.133	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-870092	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	-870457	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-1108685	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	346788	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	373896	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	1464980	+	BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3	0.0	
chr2	152294204	152294344	reg1036501.p1	4.133	+	AY727912 NM_001177665 TSC_hg19_v1_chr2_+_152266674	-27636	+	TSC_hg19_v1_chr2_+_152266419 AY727910 AY727913 NM_001177663 NM_018151 AY727911 NM_001177664 AK299572 AK299291 BX648324 AY585745 CR933663	-27844	+	NM_007115 M31165 BC030205 AB590644 AJ419936 AJ421518 CU688838 AF086484	-80095	+	TSC_hg19_v1_chr2_-_152590990 AK096903 AK307607 BC029384 BC012533 BC056251 BC105590 NM_001164507 NM_001164508 NM_004543	296717	-	AB528315 AF493891 BT009829 DQ891193 DQ894376 TSC_hg19_v1_chr2_-_152684707 AF100740	390447	-	TSC_hg19_v1_chr2_-_152684901 AK292714 BC001254	390629	-	AY727912|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177665|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727910|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727913|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_018151|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727911|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177664|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299572|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299291|RIF1|55183|RAP1 interacting factor homolog (yeast)##BX648324|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY585745|RIF1|55183|RAP1 interacting factor homolog (yeast)##CR933663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_007115|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##M31165|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##BC030205|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AJ419936|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AJ421518|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AF086484|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AK096903|NEB|4703|nebulin##AK307607|NEB|4703|nebulin##BC029384|NEB|4703|nebulin##BC012533|NEB|4703|nebulin##BC056251|NEB|4703|nebulin##BC105590|NEB|4703|nebulin##NM_001164507|NEB|4703|nebulin##NM_001164508|NEB|4703|nebulin##NM_004543|NEB|4703|nebulin##AF493891|ARL5A|26225|ADP-ribosylation factor-like 5A##BT009829|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ891193|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ894376|ARL5A|26225|ADP-ribosylation factor-like 5A##AF100740|ARL5A|26225|ADP-ribosylation factor-like 5A##AK292714|ARL5A|26225|ADP-ribosylation factor-like 5A##BC001254|ARL5A|26225|ADP-ribosylation factor-like 5A	0.999863	CTCF.p2:-20:1.000
chr2	96714916	96715023	reg1035205.p1	4.133	+	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	-14275	-	TSC_hg19_v1_chr2_+_96676311 BC015216	-38645	+	TSC_hg19_v1_chr2_-_96657677 AK302433	-57347	-	NM_000682 AB527942 BC133021 BC136537	66966	-	BC107126 AJ537600 BC107127 NM_001002036	89204	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	95985	-	BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302433|ANKRD36C|400986|ankyrin repeat domain 36C##NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2	0.553626	CTCF.p2:10:0.554
chr3	122134826	122134995	reg1033752.p1	4.133	+	NM_014367 AK026030 BC010896 BC015060 AF201944 AF107495 AF250321 TSC_hg19_v1_chr3_+_122103076 AK293994 AF191020	-31842	+	BC019231 BC109378 TSC_hg19_v1_chr3_-_122102079 BC054051 BC062725 NM_001017928	-32833	-	NM_005213 AK291308 BC010379 X05978 CR456914	-90836	+	BC025762 NM_019069 TSC_hg19_v1_chr3_-_122134925	7	-	S75295 TSC_hg19_v1_chr3_-_122233757 BC090864	98790	-	TSC_hg19_v1_chr3_-_122233764 BC002374 BC003009 AK312713	98862	-	NM_014367|FAM162A|26355|family with sequence similarity 162, member A##AK026030|FAM162A|26355|family with sequence similarity 162, member A##BC010896|FAM162A|26355|family with sequence similarity 162, member A##BC015060|FAM162A|26355|family with sequence similarity 162, member A##AF201944|FAM162A|26355|family with sequence similarity 162, member A##AF107495|FAM162A|26355|family with sequence similarity 162, member A##AF250321|FAM162A|26355|family with sequence similarity 162, member A##AK293994|FAM162A|26355|family with sequence similarity 162, member A##AF191020|FAM162A|26355|family with sequence similarity 162, member A##BC109378|CCDC58|131076|coiled-coil domain containing 58##BC054051|CCDC58|131076|coiled-coil domain containing 58##BC062725|CCDC58|131076|coiled-coil domain containing 58##NM_001017928|CCDC58|131076|coiled-coil domain containing 58##NM_005213|CSTA|1475|cystatin A (stefin A)##AK291308|CSTA|1475|cystatin A (stefin A)##BC010379|CSTA|1475|cystatin A (stefin A)##X05978|CSTA|1475|cystatin A (stefin A)##CR456914|CSTA|1475|cystatin A (stefin A)##BC025762|WDR5B|54554|WD repeat domain 5B##NM_019069|WDR5B|54554|WD repeat domain 5B##S75295|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC090864|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC002374|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC003009|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##AK312713|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)	0.0	
chr3	81468486	81468599	reg1034520.p1	4.133	+	NM_002941	-1651484	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-2399955	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-2801557	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	342155	-	TSC_hg19_v1_chr3_-_81810798 AK312245	342256	-	TSC_hg19_v1_chr3_-_81810802 AK297939	342263	-	NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK297939|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.554008	CTCF.p2:-6:0.554
chr5	87957087	87957268	reg1033793.p2	4.133	+	BC047059 TSC_hg19_v1_chr5_+_87564842	-392328	+	TSC_hg19_v1_chr5_+_87564773 BC030122	-392421	+	BX647345 AK299896 AK300893 AK301091 AY358693 BC037287 NM_153354 AK294520	-392533	-	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	11968	-	TSC_hg19_v1_chr5_-_87980643 AK125167	23530	-	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	162496	-	BC047059|LOC100505894|100505894|uncharacterized LOC100505894##BC030122|LOC100505894|100505894|uncharacterized LOC100505894##BX647345|TMEM161B|153396|transmembrane protein 161B##AK299896|TMEM161B|153396|transmembrane protein 161B##AK300893|TMEM161B|153396|transmembrane protein 161B##AK301091|TMEM161B|153396|transmembrane protein 161B##AY358693|TMEM161B|153396|transmembrane protein 161B##BC037287|TMEM161B|153396|transmembrane protein 161B##NM_153354|TMEM161B|153396|transmembrane protein 161B##AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C	0.0	
chr6	166570627	166570730	reg1034355.p2	4.133	+	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	-169144	-	TSC_hg19_v1_chr6_-_166401424 AK289375	-169245	-	AY203946 TSC_hg19_v1_chr6_-_166076051	-494626	-	BC098425 NM_003181	11451	-	BC034775 NM_175922 TSC_hg19_v1_chr6_-_166721880	151198	-	BC018969 NM_145169 TSC_hg19_v1_chr6_-_166756020	185329	-	BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##AK289375|LINC00473|90632|long intergenic non-protein coding RNA 473##AY203946|LOC100132188|100132188|LP7097##BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)##BC034775|PRR18|285800|proline rich 18##NM_175922|PRR18|285800|proline rich 18##BC018969|SFT2D1|113402|SFT2 domain containing 1##NM_145169|SFT2D1|113402|SFT2 domain containing 1	0.884309	CTCF.p2:-15:0.884
chr8	12566349	12566486	reg1005764.p2	4.133	+	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-272513	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-272574	-	DQ012022 NM_001037804 NM_001195257	-390593	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	46587	-	AK296010 NM_020844	236749	+	AB040889 NM_001099677	303355	+	BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456	0.740157	CTCF.p2:-64:0.740
chr9	99984181	99984288	reg1033956.p1	4.133	+	AK312806 NM_001201575	-182310	-	AF070448 BC023504 Y14734 AB001928 AK310645 AK310740 BC110512 AY358641 NM_001333	-182756	-	TSC_hg19_v1_chr9_-_99775872 BC005058	-208334	-	NM_020893 CR749320	85704	+	TSC_hg19_v1_chr9_+_100174364 NM_014290 BC028694	190039	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	190145	+	AK312806|CTSL2|1515|cathepsin L2##NM_001201575|CTSL2|1515|cathepsin L2##AF070448|CTSL2|1515|cathepsin L2##BC023504|CTSL2|1515|cathepsin L2##Y14734|CTSL2|1515|cathepsin L2##AB001928|CTSL2|1515|cathepsin L2##AK310645|CTSL2|1515|cathepsin L2##AK310740|CTSL2|1515|cathepsin L2##BC110512|CTSL2|1515|cathepsin L2##AY358641|CTSL2|1515|cathepsin L2##NM_001333|CTSL2|1515|cathepsin L2##BC005058|HIATL2|84278|hippocampus abundant transcript-like 2##NM_020893|C9orf174|100499483|chromosome 9 open reading frame 174##CR749320|C9orf174|100499483|chromosome 9 open reading frame 174##NM_014290|TDRD7|23424|tudor domain containing 7##BC028694|TDRD7|23424|tudor domain containing 7##AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7	0.0	
chr1	235099046	235099131	reg1023988.p1	4.132	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-203314	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-353842	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-355230	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	193001	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	193143	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	225475	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr12	56522147	56522265	reg1028794.p2	4.132	+	TSC_hg19_v1_chr12_+_56522081 EU832620 EU832692 DQ993200	-102	+	TSC_hg19_v1_chr12_+_56522050 AK225035 AK290337 BC004998 BC013880	-149	+	TSC_hg19_v1_chr12_+_56522044 AK128730	-162	+	TSC_hg19_v1_chr12_+_56522204 AB018290	9	+	BC014400 NM_001199629 NM_002475 TSC_hg19_v1_chr12_+_56546370 AK304594 AK310996	24092	+	NM_021019 NM_079423 TSC_hg19_v1_chr12_+_56552121	29882	+	EU832620|ESYT1|23344|extended synaptotagmin-like protein 1##EU832692|ESYT1|23344|extended synaptotagmin-like protein 1##DQ993200|ESYT1|23344|extended synaptotagmin-like protein 1##AK225035|ESYT1|23344|extended synaptotagmin-like protein 1##AK290337|ESYT1|23344|extended synaptotagmin-like protein 1##BC004998|ESYT1|23344|extended synaptotagmin-like protein 1##BC013880|ESYT1|23344|extended synaptotagmin-like protein 1##AK128730|ESYT1|23344|extended synaptotagmin-like protein 1##AB018290|ESYT1|23344|extended synaptotagmin-like protein 1##BC014400|MYL6B|140465|myosin, light chain 6B, alkali, smooth muscle and non-muscle##NM_001199629|MYL6B|140465|myosin, light chain 6B, alkali, smooth muscle and non-muscle##NM_002475|MYL6B|140465|myosin, light chain 6B, alkali, smooth muscle and non-muscle##AK304594|MYL6B|140465|myosin, light chain 6B, alkali, smooth muscle and non-muscle##AK310996|MYL6B|140465|myosin, light chain 6B, alkali, smooth muscle and non-muscle##NM_021019|MYL6|4637|myosin, light chain 6, alkali, smooth muscle and non-muscle##NM_079423|MYL6|4637|myosin, light chain 6, alkali, smooth muscle and non-muscle	0.334585	CTCF.p2:-84:0.335
chr13	40600413	40600530	reg1024605.p1	4.132	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-370610	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-423109	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-423144	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	640241	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	744821	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	744861	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.0	
chr15	52052131	52052236	reg1029805.p2	4.132	+	TSC_hg19_v1_chr15_+_52043793 NM_001142885 NM_014548 BC036184 BC064961 BC052749 AF177169 AK293823 AK292733	-8360	+	NM_001143917 TSC_hg19_v1_chr15_-_52043732 BC022075	-8468	-	TSC_hg19_v1_chr15_-_52030323 AY125955 BC033515 NM_153374	-21924	-	TSC_hg19_v1_chr15_+_52121827 NM_014547 AK312569	69644	+	TSC_hg19_v1_chr15_+_52121876 BX647277 AF177171 BC020542	69836	+	TSC_hg19_v1_chr15_+_52201590 AK025704	149427	+	NM_001142885|TMOD2|29767|tropomodulin 2 (neuronal)##NM_014548|TMOD2|29767|tropomodulin 2 (neuronal)##BC036184|TMOD2|29767|tropomodulin 2 (neuronal)##BC064961|TMOD2|29767|tropomodulin 2 (neuronal)##AF177169|TMOD2|29767|tropomodulin 2 (neuronal)##AK293823|TMOD2|29767|tropomodulin 2 (neuronal)##AK292733|TMOD2|29767|tropomodulin 2 (neuronal)##NM_001143917|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##BC022075|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##AY125955|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##BC033515|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##NM_153374|LYSMD2|256586|LysM, putative peptidoglycan-binding, domain containing 2##NM_014547|TMOD3|29766|tropomodulin 3 (ubiquitous)##AK312569|TMOD3|29766|tropomodulin 3 (ubiquitous)##BX647277|TMOD3|29766|tropomodulin 3 (ubiquitous)##AF177171|TMOD3|29766|tropomodulin 3 (ubiquitous)##BC020542|TMOD3|29766|tropomodulin 3 (ubiquitous)##AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)	0.685161	CTCF.p2:8:0.685
chr19	10339212	10339392	reg1005893.p2	4.132	+	TSC_hg19_v1_chr19_-_10305646 BC126227 BC144093 NM_001130823 NM_001379 AF180682 X63692	-33575	-	TSC_hg19_v1_chr19_-_10305600 BC092517	-33697	-	AB209413 TSC_hg19_v1_chr19_-_10305579	-33745	-	NM_004230 TSC_hg19_v1_chr19_-_10342058	2704	-	TSC_hg19_v1_chr19_+_10362680 NM_015956 NM_146387 NM_146388 AF132962 BC000756	23345	+	TSC_hg19_v1_chr19_+_10362889 BC009858	23596	+	BC126227|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC144093|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001130823|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_001379|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##AF180682|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##X63692|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##BC092517|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##AB209413|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1##NM_004230|S1PR2|9294|sphingosine-1-phosphate receptor 2##NM_015956|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146387|MRPL4|51073|mitochondrial ribosomal protein L4##NM_146388|MRPL4|51073|mitochondrial ribosomal protein L4##AF132962|MRPL4|51073|mitochondrial ribosomal protein L4##BC000756|MRPL4|51073|mitochondrial ribosomal protein L4##BC009858|MRPL4|51073|mitochondrial ribosomal protein L4	0.0	
chr19	45596004	45596185	reg1027608.p1	4.132	+	TSC_hg19_v1_chr19_+_45582529 NM_001007270 NM_001007269 NM_024707 AK024018 BC007793	-13581	+	BC019352 NM_145288	-16407	-	TSC_hg19_v1_chr19_+_45542313 AF042800 NM_007056 AK293333 AY358944 BC013178	-53771	+	TSC_hg19_v1_chr19_+_45596205 BC035704	121	+	TSC_hg19_v1_chr19_+_45596436 NM_019121	328	+	NM_198478	67313	-	NM_001007270|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_001007269|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_024707|GEMIN7|79760|gem (nuclear organelle) associated protein 7##AK024018|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC007793|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC019352|ZNF296|162979|zinc finger protein 296##NM_145288|ZNF296|162979|zinc finger protein 296##AF042800|CLASRP|11129|CLK4-associating serine/arginine rich protein##NM_007056|CLASRP|11129|CLK4-associating serine/arginine rich protein##AK293333|CLASRP|11129|CLK4-associating serine/arginine rich protein##AY358944|CLASRP|11129|CLK4-associating serine/arginine rich protein##BC013178|CLASRP|11129|CLK4-associating serine/arginine rich protein##BC035704|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##NM_019121|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##NM_198478|NKPD1|284353|NTPase, KAP family P-loop domain containing 1	0.0	
chr2	239216955	239217058	reg1035096.p2	4.132	+	AB002345 AK294876 NM_022817 TSC_hg19_v1_chr2_-_239197345	-19786	-	TSC_hg19_v1_chr2_-_239148680 BC007939 AK075040 AK293111 NM_001142853 NM_018645	-68348	-	AB035179 AB463715 TSC_hg19_v1_chr2_-_239148612 AF260237	-68428	-	TSC_hg19_v1_chr2_+_239229037 AF242456	12053	+	TSC_hg19_v1_chr2_+_239229202 BC059174 NM_001139490 NM_015650	12169	+	TSC_hg19_v1_chr2_+_239229215 AB590948 CU691344 AF230877	12252	+	AB002345|PER2|8864|period homolog 2 (Drosophila)##AK294876|PER2|8864|period homolog 2 (Drosophila)##NM_022817|PER2|8864|period homolog 2 (Drosophila)##BC007939|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AK075040|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AK293111|HES6|55502|hairy and enhancer of split 6 (Drosophila)##NM_001142853|HES6|55502|hairy and enhancer of split 6 (Drosophila)##NM_018645|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AB035179|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AF260237|HES6|55502|hairy and enhancer of split 6 (Drosophila)##AF242456|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##BC059174|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##NM_001139490|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##NM_015650|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1##AF230877|TRAF3IP1|26146|TNF receptor-associated factor 3 interacting protein 1	0.995928	CTCF.p2:5:0.996
chr22	45019668	45019773	reg1033131.p2	4.132	+	TSC_hg19_v1_chr22_-_44893996 BC030232 NM_032287 AK296479	-125602	-	AB463098 CU013037 CU013325 CR456439 TSC_hg19_v1_chr22_-_44893542	-126231	-	AK126304 TSC_hg19_v1_chr22_-_44893199	-126524	-	TSC_hg19_v1_chr22_+_45064630 AY859540 NM_001017528 NM_001017529	44775	+	NM_001017530 NM_001198721 NM_015366	52967	+	AK091884 TSC_hg19_v1_chr22_+_45072964 AK055848	53250	+	BC030232|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##NM_032287|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##AK296479|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CU013037|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CU013325|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CR456439|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##AK126304|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##AY859540|PRR5|55615|proline rich 5 (renal)##NM_001017528|PRR5|55615|proline rich 5 (renal)##NM_001017529|PRR5|55615|proline rich 5 (renal)##NM_001017530|PRR5|55615|proline rich 5 (renal)##NM_001198721|PRR5|55615|proline rich 5 (renal)##NM_015366|PRR5|55615|proline rich 5 (renal)##AK091884|PRR5|55615|proline rich 5 (renal)##AK055848|PRR5|55615|proline rich 5 (renal)	0.056897	
chr4	103834449	103834533	reg1036010.p2	4.132	+	TSC_hg19_v1_chr4_+_103790197 AK292134 BC020831 BX537971 BC032300 AM392809 AM393385	-44275	+	TSC_hg19_v1_chr4_+_103790148 NM_001008388	-44339	+	NM_181893 NM_181890	-44475	-	BC110794 TSC_hg19_v1_chr4_-_103940827 BC022079 BC046636 AK313592 BC132712 BC136966 BC144443	106317	-	AY461581 TSC_hg19_v1_chr4_-_103940874 AF447585 DQ003059 NM_001100874 NM_139173	106377	-	BC047447 TSC_hg19_v1_chr4_-_103997468 AK299888	162982	-	AK292134|CISD2|493856|CDGSH iron sulfur domain 2##BC020831|CISD2|493856|CDGSH iron sulfur domain 2##BX537971|CISD2|493856|CDGSH iron sulfur domain 2##BC032300|CISD2|493856|CDGSH iron sulfur domain 2##AM392809|CISD2|493856|CDGSH iron sulfur domain 2##AM393385|CISD2|493856|CDGSH iron sulfur domain 2##NM_001008388|CISD2|493856|CDGSH iron sulfur domain 2##NM_181893|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181890|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##BC110794|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC022079|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC046636|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##AK313592|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC132712|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC136966|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC144443|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##AY461581|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##AF447585|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##DQ003059|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##NM_001100874|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##NM_139173|SLC9B1|150159|solute carrier family 9, subfamily B (cation proton antiporter 2), member 1##BC047447|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2##AK299888|SLC9B2|133308|solute carrier family 9, subfamily B (cation proton antiporter 2), member 2	0.0	
chr7	44808075	44808235	reg1032058.p2	4.132	+	NM_174929 BC131780 BC016968 AY426594 AF357908	-12338	+	TSC_hg19_v1_chr7_+_44788465 AK090415 NM_031449	-19664	+	TSC_hg19_v1_chr7_+_44788175 BC110435	-19973	+	TSC_hg19_v1_chr7_+_44836244 BC137057 BC137058 NM_021130	28062	+	TSC_hg19_v1_chr7_+_44836279 AK290851 BC005982 AK130101 AK293003 BC007104 BC013915 AK026569 AK297340 AK316564 BC093076 AK290085 BC005320 D28351 BC106030 BC073992 BC003026 BC000689	28132	+	Y00052 TSC_hg19_v1_chr7_+_44836309 AB464007 DQ892625 DQ895865 CU674338 AB451307 AB451438 CR456707	28161	+	NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2##NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##D28351|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	0.0	
chr11	126177718	126177898	reg1032897.p1	4.131	+	TSC_hg19_v1_chr11_+_126173954 AK307403 BC014532 AF077201 CU677035 AY077684	-3839	+	TSC_hg19_v1_chr11_+_126173950 AY040771 AK026554 AK223089	-3862	+	AF532613 NM_014026	-4162	+	TSC_hg19_v1_chr11_-_126225452 AK096370	47655	-	NM_006278 X74570	48287	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	98190	+	AK307403|DCPS|28960|decapping enzyme, scavenger##BC014532|DCPS|28960|decapping enzyme, scavenger##AF077201|DCPS|28960|decapping enzyme, scavenger##AY077684|DCPS|28960|decapping enzyme, scavenger##AY040771|DCPS|28960|decapping enzyme, scavenger##AK026554|DCPS|28960|decapping enzyme, scavenger##AK223089|DCPS|28960|decapping enzyme, scavenger##AF532613|DCPS|28960|decapping enzyme, scavenger##NM_014026|DCPS|28960|decapping enzyme, scavenger##AK096370|FLJ39051|399972|uncharacterized LOC399972##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4	0.995054	CTCF.p2:-16:0.995
chr11	35148100	35148269	reg1033967.p1	4.131	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-210027	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-210295	-	NM_001135024 NM_001166158 NM_003477	-210508	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	12216	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	12550	+	TSC_hg19_v1_chr11_+_35160821 M59040	12634	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr11	60589868	60589973	reg1030956.p1	4.131	+	AK122633 NM_206893 BC137259 BC137263	-37075	+	NM_001098835 NM_152717 AK300233 BC031610 AK091846 AX747218 AY584608 AY584609	-65511	+	AF237905 NM_031457 AK310969 AK310884 AK315901 BC022895 AK308413 AF350504 AK310872	-122788	+	NM_024098 TSC_hg19_v1_chr11_+_60609543 AK025974 AK302329 AK123775 BC001378 DQ892603 DQ895844 DQ501251	19601	+	AF144308 AK291371 AK313849 TSC_hg19_v1_chr11_-_60623424 AB008535 NM_004778	33512	-	NM_207341	45094	+	AK122633|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_206893|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137259|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137263|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_001098835|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##NM_152717|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK300233|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##BC031610|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK091846|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584608|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584609|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AF237905|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_031457|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310969|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310884|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK315901|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##BC022895|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK308413|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AF350504|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310872|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_024098|CCDC86|79080|coiled-coil domain containing 86##AK025974|CCDC86|79080|coiled-coil domain containing 86##AK302329|CCDC86|79080|coiled-coil domain containing 86##AK123775|CCDC86|79080|coiled-coil domain containing 86##BC001378|CCDC86|79080|coiled-coil domain containing 86##DQ892603|CCDC86|79080|coiled-coil domain containing 86##DQ895844|CCDC86|79080|coiled-coil domain containing 86##DQ501251|CCDC86|79080|coiled-coil domain containing 86##AF144308|PTGDR2|11251|prostaglandin D2 receptor 2##AK291371|PTGDR2|11251|prostaglandin D2 receptor 2##AK313849|PTGDR2|11251|prostaglandin D2 receptor 2##AB008535|PTGDR2|11251|prostaglandin D2 receptor 2##NM_004778|PTGDR2|11251|prostaglandin D2 receptor 2##NM_207341|ZP1|22917|zona pellucida glycoprotein 1 (sperm receptor)	0.0	
chr14	37619076	37619216	reg1041351.p1	4.131	+	AK313627 TSC_hg19_v1_chr14_+_37131133 AB248958	-488021	+	TSC_hg19_v1_chr14_+_37131069 BC001159	-488062	+	NM_006194	-492374	+	AJ278148 NM_001171170 NM_030631	22718	-	TSC_hg19_v1_chr14_+_37667116 NM_001195296 NM_001195297 NM_138731	47972	+	TSC_hg19_v1_chr14_+_37667148 BC035870 BX537396 AK291850 BC036523 BC036124 BX647795 AY059470	48074	+	AK313627|PAX9|5083|paired box 9##AB248958|PAX9|5083|paired box 9##BC001159|PAX9|5083|paired box 9##NM_006194|PAX9|5083|paired box 9##AJ278148|SLC25A21|89874|solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21##NM_001171170|SLC25A21|89874|solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21##NM_030631|SLC25A21|89874|solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21##NM_001195296|MIPOL1|145282|mirror-image polydactyly 1##NM_001195297|MIPOL1|145282|mirror-image polydactyly 1##NM_138731|MIPOL1|145282|mirror-image polydactyly 1##BC035870|MIPOL1|145282|mirror-image polydactyly 1##BX537396|MIPOL1|145282|mirror-image polydactyly 1##AK291850|MIPOL1|145282|mirror-image polydactyly 1##BC036523|MIPOL1|145282|mirror-image polydactyly 1##BC036124|MIPOL1|145282|mirror-image polydactyly 1##BX647795|MIPOL1|145282|mirror-image polydactyly 1##AY059470|MIPOL1|145282|mirror-image polydactyly 1	0.999188	CTCF.p2:-42:0.999
chr19	4246869	4246981	reg1030958.p1	4.131	+	BC015364 L08187 NM_005755 BC046112 AB528398 DQ891589 EU176581 CU677281	-17405	+	NM_133475	-63575	+	TSC_hg19_v1_chr19_-_4182561 DQ896358 EU176413 AB528632 CR457200 CU678868 BC005026 BC000090 BC004218 AK299420 BC028220 AK293348 AK315048 AK301247 AK074810 AK225567 AF233396 NM_001193285 NM_016539	-64380	-	TSC_hg19_v1_chr19_+_4247086 AK001236 BC000561 AK023988 NM_018074 AF091080	165	+	AK056268 NM_020209	31672	+	HQ452865 HQ452866 AY358964 BC015655 NM_001169126 NM_144615	55479	-	BC015364|EBI3|10148|Epstein-Barr virus induced 3##L08187|EBI3|10148|Epstein-Barr virus induced 3##NM_005755|EBI3|10148|Epstein-Barr virus induced 3##BC046112|EBI3|10148|Epstein-Barr virus induced 3##DQ891589|EBI3|10148|Epstein-Barr virus induced 3##EU176581|EBI3|10148|Epstein-Barr virus induced 3##NM_133475|ANKRD24|170961|ankyrin repeat domain 24##DQ896358|SIRT6|51548|sirtuin 6##EU176413|SIRT6|51548|sirtuin 6##CR457200|SIRT6|51548|sirtuin 6##BC005026|SIRT6|51548|sirtuin 6##BC004218|SIRT6|51548|sirtuin 6##AK299420|SIRT6|51548|sirtuin 6##BC028220|SIRT6|51548|sirtuin 6##AK293348|SIRT6|51548|sirtuin 6##AK315048|SIRT6|51548|sirtuin 6##AK301247|SIRT6|51548|sirtuin 6##AK074810|SIRT6|51548|sirtuin 6##AK225567|SIRT6|51548|sirtuin 6##AF233396|SIRT6|51548|sirtuin 6##NM_001193285|SIRT6|51548|sirtuin 6##NM_016539|SIRT6|51548|sirtuin 6##AK001236|CCDC94|55702|coiled-coil domain containing 94##BC000561|CCDC94|55702|coiled-coil domain containing 94##AK023988|CCDC94|55702|coiled-coil domain containing 94##NM_018074|CCDC94|55702|coiled-coil domain containing 94##AF091080|CCDC94|55702|coiled-coil domain containing 94##AK056268|SHD|56961|Src homology 2 domain containing transforming protein D##NM_020209|SHD|56961|Src homology 2 domain containing transforming protein D##HQ452865|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##HQ452866|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##AY358964|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##BC015655|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##NM_001169126|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2##NM_144615|TMIGD2|126259|transmembrane and immunoglobulin domain containing 2	0.074351	
chr19	7183299	7183425	reg1031155.p1	4.131	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-83811	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-113647	+	AK315405 NM_001044387 NM_001044388 NM_024341	-113900	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	110598	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	276645	+	TSC_hg19_v1_chr19_+_7460061 AB011093	276715	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr22	36657928	36658056	reg1037146.p1	4.131	+	TSC_hg19_v1_chr22_+_36649178 AF305224 AK303919 AK313752 AK298053 BC113867 BC114475 BC127186 BC143038 BC143039 BC017331 AK296099	-8803	+	NM_001136540 NM_001136541 NM_003661 NM_145343 TSC_hg19_v1_chr22_+_36649135 AF019225 AF323540 AK309143 AF305428 AK300454 BC112943 BC141823 BC142720	-8853	+	AF324224 NM_145637	-21993	-	BC011915 TSC_hg19_v1_chr22_-_36681760	23771	-	D11393 TSC_hg19_v1_chr22_-_36697021	39022	-	TSC_hg19_v1_chr22_-_36783906 AB290175 CR456526	125894	-	AF305224|APOL1|8542|apolipoprotein L, 1##AK303919|APOL1|8542|apolipoprotein L, 1##AK313752|APOL1|8542|apolipoprotein L, 1##AK298053|APOL1|8542|apolipoprotein L, 1##BC113867|APOL1|8542|apolipoprotein L, 1##BC114475|APOL1|8542|apolipoprotein L, 1##BC127186|APOL1|8542|apolipoprotein L, 1##BC143038|APOL1|8542|apolipoprotein L, 1##BC143039|APOL1|8542|apolipoprotein L, 1##BC017331|APOL1|8542|apolipoprotein L, 1##AK296099|APOL1|8542|apolipoprotein L, 1##NM_001136540|APOL1|8542|apolipoprotein L, 1##NM_001136541|APOL1|8542|apolipoprotein L, 1##NM_003661|APOL1|8542|apolipoprotein L, 1##NM_145343|APOL1|8542|apolipoprotein L, 1##AF019225|APOL1|8542|apolipoprotein L, 1##AF323540|APOL1|8542|apolipoprotein L, 1##AK309143|APOL1|8542|apolipoprotein L, 1##AF305428|APOL1|8542|apolipoprotein L, 1##AK300454|APOL1|8542|apolipoprotein L, 1##BC112943|APOL1|8542|apolipoprotein L, 1##BC141823|APOL1|8542|apolipoprotein L, 1##BC142720|APOL1|8542|apolipoprotein L, 1##AF324224|APOL2|23780|apolipoprotein L, 2##NM_145637|APOL2|23780|apolipoprotein L, 2##BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle##D11393|MYH9|4627|myosin, heavy chain 9, non-muscle##AB290175|MYH9|4627|myosin, heavy chain 9, non-muscle##CR456526|MYH9|4627|myosin, heavy chain 9, non-muscle	0.998878	CTCF.p2:9:0.999
chr2	89412067	89412171	reg1035043.p2	4.131	+	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	-119706	-	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	-227029	+	S49006 TSC_hg19_v1_chr2_-_89165772	-246407	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	30470	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	101114	-	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	207734	-	AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##BC070336|IGKC|3514|immunoglobulin kappa constant##BC070334|IGKC|3514|immunoglobulin kappa constant	0.938247	CTCF.p2:4:0.938
chr4	164586811	164586922	reg1033408.p1	4.131	+	AB463878 AK000675 AK301408 NM_017923	-52151	-	TSC_hg19_v1_chr4_+_164415868 BC011842	-170993	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-171024	+	NM_012403	531996	-	AK289711 NM_001166373	717540	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	1291236	+	AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39	0.945208	CTCF.p2:19:0.945
chr6_mcf_hap5	2841435	2841540	reg1030411.p1	4.131	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr11	110220448	110220573	reg1029709.p1	4.130	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	-53197	-	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	-256380	+	AK095101 TSC_hg19_v1_chr11_+_109963524	-256982	+	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	80206	+	AY496266 TSC_hg19_v1_chr11_-_110582834	362293	-	TSC_hg19_v1_chr11_-_110582887 AB037812	362415	-	BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20##AB037812|ARHGAP20|57569|Rho GTPase activating protein 20	0.0	
chr17	66610218	66610340	reg1032668.p1	4.130	+	AK056789 BC136686 BC136689 AY358197 NM_001243746 NM_017565 TSC_hg19_v1_chr17_-_66597112	-13256	-	AK298071 TSC_hg19_v1_chr17_-_66596742	-13540	-	TSC_hg19_v1_chr17_+_66508570 BC036285 S54705 AK124586 AK312307 CR749311 M18468 M33336	-101680	+	BC130280 BC143971 BC143972 AK304286 BC010392 AB020629 BC047765 BC094689 AK304360 AK295876 BC037309 BC024003 NM_007168	341177	-	BC062472 AK057068 AY028899 NM_080283	446811	-	BC125231 BC125232 AY028898 NM_080284 TSC_hg19_v1_chr17_-_67138037 BC070125 AK308431 BC029852	527796	-	AK056789|FAM20A|54757|family with sequence similarity 20, member A##BC136686|FAM20A|54757|family with sequence similarity 20, member A##BC136689|FAM20A|54757|family with sequence similarity 20, member A##AY358197|FAM20A|54757|family with sequence similarity 20, member A##NM_001243746|FAM20A|54757|family with sequence similarity 20, member A##NM_017565|FAM20A|54757|family with sequence similarity 20, member A##AK298071|FAM20A|54757|family with sequence similarity 20, member A##BC036285|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##S54705|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK124586|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK312307|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##CR749311|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M18468|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M33336|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	0.672877	CTCF.p2:5:0.673
chr20	23096501	23096633	reg1034326.p1	4.130	+	AB527124 AM393282 AM393752 DQ891055 DQ894234 TSC_hg19_v1_chr20_-_23066962 AJ295142 AB209895 BC028075 AK299957 NM_012072 U94333	-29634	-	TSC_hg19_v1_chr20_-_23062805 AK056764	-33755	-	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	-66329	-	BC003410 NM_013248 TSC_hg19_v1_chr20_+_23331435 AK026360 BC000759 BC003029 AF156957 BC002687	234877	+	AK295362 TSC_hg19_v1_chr20_+_23342818 AK056477 AK293942 AK314599	246246	+	TSC_hg19_v1_chr20_+_23342853 AK289814	246292	+	AM393282|CD93|22918|CD93 molecule##AM393752|CD93|22918|CD93 molecule##DQ891055|CD93|22918|CD93 molecule##DQ894234|CD93|22918|CD93 molecule##AJ295142|CD93|22918|CD93 molecule##AB209895|CD93|22918|CD93 molecule##BC028075|CD93|22918|CD93 molecule##AK299957|CD93|22918|CD93 molecule##NM_012072|CD93|22918|CD93 molecule##U94333|CD93|22918|CD93 molecule##AK056764|CD93|22918|CD93 molecule##BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##BC003410|NXT1|29107|NTF2-like export factor 1##NM_013248|NXT1|29107|NTF2-like export factor 1##AK026360|NXT1|29107|NTF2-like export factor 1##BC000759|NXT1|29107|NTF2-like export factor 1##BC003029|NXT1|29107|NTF2-like export factor 1##AF156957|NXT1|29107|NTF2-like export factor 1##BC002687|NXT1|29107|NTF2-like export factor 1##AK295362|GZF1|64412|GDNF-inducible zinc finger protein 1##AK056477|GZF1|64412|GDNF-inducible zinc finger protein 1##AK293942|GZF1|64412|GDNF-inducible zinc finger protein 1##AK314599|GZF1|64412|GDNF-inducible zinc finger protein 1##AK289814|GZF1|64412|GDNF-inducible zinc finger protein 1	0.0	
chr2	74771917	74772023	reg1028748.p1	4.130	+	TSC_hg19_v1_chr2_+_74757315 AF141307	-14685	+	TSC_hg19_v1_chr2_+_74757160 AF141306	-14785	+	TSC_hg19_v1_chr2_+_74757127 AB463757 DQ891822 DQ895009 EU176308	-14836	+	NM_001197260 AF035299	4179	+	AF311313 NM_032603 AF284815 AF282619 AK309474	9104	-	NM_001381	9541	+	AF141307|HTRA2|27429|HtrA serine peptidase 2##AF141306|HTRA2|27429|HtrA serine peptidase 2##DQ891822|HTRA2|27429|HtrA serine peptidase 2##DQ895009|HTRA2|27429|HtrA serine peptidase 2##EU176308|HTRA2|27429|HtrA serine peptidase 2##NM_001197260|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF035299|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF311313|LOXL3|84695|lysyl oxidase-like 3##NM_032603|LOXL3|84695|lysyl oxidase-like 3##AF284815|LOXL3|84695|lysyl oxidase-like 3##AF282619|LOXL3|84695|lysyl oxidase-like 3##AK309474|LOXL3|84695|lysyl oxidase-like 3##NM_001381|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)	0.2639	CTCF.p2:8:0.264
chr3	17852465	17852555	reg1034569.p1	4.130	+	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-68343	-	D86965 NM_014744	-70112	-	AK310539 NM_001134381	-110999	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	614287	-	BC001744 NM_001131010	627723	-	AK295633 AY053503 NM_144633 AB209053 AK309034	1337494	+	NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	0.083015	
chr5	96498981	96499062	reg1022544.p1	4.130	+	AK291034 TSC_hg19_v1_chr5_-_96478504 NM_153234 AK098400	-20483	-	AK307885 TSC_hg19_v1_chr5_-_96478482	-20546	-	BC036467 TSC_hg19_v1_chr5_-_96478440	-20579	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	19887	-	TSC_hg19_v1_chr5_-_96518945 AK002021	19921	-	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	19966	-	AK291034|LIX1|167410|Lix1 homolog (chicken)##NM_153234|LIX1|167410|Lix1 homolog (chicken)##AK098400|LIX1|167410|Lix1 homolog (chicken)##AK307885|LIX1|167410|Lix1 homolog (chicken)##BC036467|LIX1|167410|Lix1 homolog (chicken)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)	0.0	
chr6	167454907	167455014	reg1033450.p1	4.130	+	TSC_hg19_v1_chr6_+_167412884 NM_007045 NM_194429 Y18046 AK294950 AK289846 BX647686 AK312791 BC011902 AB590215 CU680104 DQ893037 DQ896278 AJ420472	-42107	+	AK315467 TSC_hg19_v1_chr6_-_167370038 BC036282 NM_003730	-84903	-	TSC_hg19_v1_chr6_-_167370030 BC001660 BC001819 BC039713 BC051912 AJ419865 AJ419866 AJ419867 U85625	-84950	-	NM_004367	70334	+	NM_031409 U68031 U68030	81289	+	BC095537 NM_005299	116356	-	NM_007045|FGFR1OP|11116|FGFR1 oncogene partner##NM_194429|FGFR1OP|11116|FGFR1 oncogene partner##Y18046|FGFR1OP|11116|FGFR1 oncogene partner##AK294950|FGFR1OP|11116|FGFR1 oncogene partner##AK289846|FGFR1OP|11116|FGFR1 oncogene partner##AK312791|FGFR1OP|11116|FGFR1 oncogene partner##BC011902|FGFR1OP|11116|FGFR1 oncogene partner##DQ893037|FGFR1OP|11116|FGFR1 oncogene partner##DQ896278|FGFR1OP|11116|FGFR1 oncogene partner##AJ420472|FGFR1OP|11116|FGFR1 oncogene partner##AK315467|RNASET2|8635|ribonuclease T2##BC036282|RNASET2|8635|ribonuclease T2##NM_003730|RNASET2|8635|ribonuclease T2##BC001660|RNASET2|8635|ribonuclease T2##BC001819|RNASET2|8635|ribonuclease T2##BC039713|RNASET2|8635|ribonuclease T2##BC051912|RNASET2|8635|ribonuclease T2##AJ419865|RNASET2|8635|ribonuclease T2##AJ419866|RNASET2|8635|ribonuclease T2##AJ419867|RNASET2|8635|ribonuclease T2##U85625|RNASET2|8635|ribonuclease T2##NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31	0.0	
chr6	3212899	3212966	reg1040397.p2	4.130	+	AY159127 CR541958 CU674602 AB528583 DQ892343 DQ895718 BC001194 TSC_hg19_v1_chr6_-_3157779 BC018780 X79535 AK308772 AK312621 NM_001069	-55186	-	TSC_hg19_v1_chr6_+_3118961 AK297518 NM_004332 AK314909 AL832502 AJ617684 X81372	-93981	+	BC126254 BC126256 HQ258488 NM_003804 U50062 AK304701	-135868	+	BT019930 CR456788 CU674662 BC063610 TSC_hg19_v1_chr6_-_3227888 AK308806 AK289433 AK297568 BC001352 NM_178012	14939	-	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	46226	+	TSC_hg19_v1_chr6_+_3259232 AK126623 AK095683	46307	+	AY159127|TUBB2A|7280|tubulin, beta 2A class IIa##CR541958|TUBB2A|7280|tubulin, beta 2A class IIa##DQ892343|TUBB2A|7280|tubulin, beta 2A class IIa##DQ895718|TUBB2A|7280|tubulin, beta 2A class IIa##BC001194|TUBB2A|7280|tubulin, beta 2A class IIa##BC018780|TUBB2A|7280|tubulin, beta 2A class IIa##X79535|TUBB2A|7280|tubulin, beta 2A class IIa##AK312621|TUBB2A|7280|tubulin, beta 2A class IIa##NM_001069|TUBB2A|7280|tubulin, beta 2A class IIa##AK297518|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##NM_004332|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AK314909|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AL832502|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AJ617684|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##X81372|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BT019930|TUBB2B|347733|tubulin, beta 2B class IIb##CR456788|TUBB2B|347733|tubulin, beta 2B class IIb##BC063610|TUBB2B|347733|tubulin, beta 2B class IIb##AK308806|TUBB2B|347733|tubulin, beta 2B class IIb##AK289433|TUBB2B|347733|tubulin, beta 2B class IIb##AK297568|TUBB2B|347733|tubulin, beta 2B class IIb##BC001352|TUBB2B|347733|tubulin, beta 2B class IIb##NM_178012|TUBB2B|347733|tubulin, beta 2B class IIb##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	0.0	
chr6	84302632	84302813	reg1035680.p2	4.130	+	TSC_hg19_v1_chr6_+_84222252 AY358661 BC037170 AK291928	-80442	+	NM_001170423 NM_153362 TSC_hg19_v1_chr6_+_84222226	-80512	+	TSC_hg19_v1_chr6_-_84140899 NM_002395	-161818	-	TSC_hg19_v1_chr6_-_84418505 AK294898	115777	-	TSC_hg19_v1_chr6_-_84418819 AB014556 AK289582 NM_001242792	116055	-	BC044579 TSC_hg19_v1_chr6_-_84419072 CR749348	116333	-	AY358661|PRSS35|167681|protease, serine, 35##BC037170|PRSS35|167681|protease, serine, 35##AK291928|PRSS35|167681|protease, serine, 35##NM_001170423|PRSS35|167681|protease, serine, 35##NM_153362|PRSS35|167681|protease, serine, 35##NM_002395|ME1|4199|malic enzyme 1, NADP(+)-dependent, cytosolic##AK294898|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##AB014556|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##AK289582|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##NM_001242792|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##BC044579|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)##CR749348|SNAP91|9892|synaptosomal-associated protein, 91kDa homolog (mouse)	0.043481	
chr7	17199429	17199602	reg1029140.p2	4.130	+	AY359065 BC058284 NM_176813	-277911	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-354844	-	TSC_hg19_v1_chr7_+_16793401 AK093487 NM_014399 AK026587 AK075475 AK316595 AY358995 AF100759 BC033863 AF120265 DQ892059 DQ895252 CR542107	-406059	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	138754	+	TSC_hg19_v1_chr7_+_17382906 BC021696	183391	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	780534	-	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK093487|TSPAN13|27075|tetraspanin 13##NM_014399|TSPAN13|27075|tetraspanin 13##AK026587|TSPAN13|27075|tetraspanin 13##AK075475|TSPAN13|27075|tetraspanin 13##AK316595|TSPAN13|27075|tetraspanin 13##AY358995|TSPAN13|27075|tetraspanin 13##AF100759|TSPAN13|27075|tetraspanin 13##BC033863|TSPAN13|27075|tetraspanin 13##AF120265|TSPAN13|27075|tetraspanin 13##DQ892059|TSPAN13|27075|tetraspanin 13##DQ895252|TSPAN13|27075|tetraspanin 13##CR542107|TSPAN13|27075|tetraspanin 13##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13	0.0	
chrX	86593672	86593789	reg1032129.p1	4.130	+	AK055953 AK298787 NM_001139515	-1075760	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	-1190265	+	TSC_hg19_v1_chrX_+_85403454 AK290596 NM_001139514 NM_053281	-1190278	+	NM_019117 NM_057162 AK056457 AB051474 BC161675 AL832514 AF284765 AF284766 BC140839 BC140840 BC142652 BC146677 AB385497	179075	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	1408510	+	BC117398 BC117400 NM_138960 BC101144 BC101145 AF497480 BC029920 AB464725 HQ258115	2583281	+	AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)##AK290596|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139514|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_053281|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)##NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)##AK056457|KLHL4|56062|kelch-like 4 (Drosophila)##AB051474|KLHL4|56062|kelch-like 4 (Drosophila)##BC161675|KLHL4|56062|kelch-like 4 (Drosophila)##AL832514|KLHL4|56062|kelch-like 4 (Drosophila)##AF284765|KLHL4|56062|kelch-like 4 (Drosophila)##AF284766|KLHL4|56062|kelch-like 4 (Drosophila)##BC140839|KLHL4|56062|kelch-like 4 (Drosophila)##BC140840|KLHL4|56062|kelch-like 4 (Drosophila)##BC142652|KLHL4|56062|kelch-like 4 (Drosophila)##BC146677|KLHL4|56062|kelch-like 4 (Drosophila)##NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1##BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	0.010069	
chr11	10329677	10329857	reg1015779.p2	4.129	+	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	-3138	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	-14001	-	AK098060 TSC_hg19_v1_chr11_+_9779882	-549905	+	AK295046 NM_001172431	142100	+	NM_000480 BC126118 TSC_hg19_v1_chr11_+_10472246 AK311436 M84720 AK289998 AK294444 AK313039 HQ258646	142628	+	NM_001025389 D12775 AK308181 M84721 AK299113 TSC_hg19_v1_chr11_+_10476953	147052	+	AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK098060|LOC283104|283104|uncharacterized LOC283104##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3##NM_000480|AMPD3|272|adenosine monophosphate deaminase 3##BC126118|AMPD3|272|adenosine monophosphate deaminase 3##AK311436|AMPD3|272|adenosine monophosphate deaminase 3##M84720|AMPD3|272|adenosine monophosphate deaminase 3##AK289998|AMPD3|272|adenosine monophosphate deaminase 3##AK294444|AMPD3|272|adenosine monophosphate deaminase 3##AK313039|AMPD3|272|adenosine monophosphate deaminase 3##HQ258646|AMPD3|272|adenosine monophosphate deaminase 3##NM_001025389|AMPD3|272|adenosine monophosphate deaminase 3##D12775|AMPD3|272|adenosine monophosphate deaminase 3##AK308181|AMPD3|272|adenosine monophosphate deaminase 3##M84721|AMPD3|272|adenosine monophosphate deaminase 3##AK299113|AMPD3|272|adenosine monophosphate deaminase 3	0.0	
chr11	82930246	82930396	reg1037850.p1	4.129	+	BX648690 NM_182603 DQ508815 AK095193 BC171752	-24833	+	TSC_hg19_v1_chr11_+_82904780 DQ508934 BC045621 AK310765 EF041819	-25487	+	AK311356 TSC_hg19_v1_chr11_-_82904700	-25619	-	TSC_hg19_v1_chr11_-_82997032 AB528098 AM393290 AM393494 CU676716 BC067764 AF182412 AF182424 AK055972 BC020783 AK225726 AK292349 BC017771 BC032701 BC014573 AL136791	66712	-	AF271782 NM_021825 BC048795 TSC_hg19_v1_chr11_-_82997434 AK304769 AK315787 BC107755	67084	-	AK299778 CR933674 NM_001142702	463130	-	BX648690|ANKRD42|338699|ankyrin repeat domain 42##NM_182603|ANKRD42|338699|ankyrin repeat domain 42##DQ508815|ANKRD42|338699|ankyrin repeat domain 42##AK095193|ANKRD42|338699|ankyrin repeat domain 42##BC171752|ANKRD42|338699|ankyrin repeat domain 42##DQ508934|ANKRD42|338699|ankyrin repeat domain 42##BC045621|ANKRD42|338699|ankyrin repeat domain 42##AK310765|ANKRD42|338699|ankyrin repeat domain 42##EF041819|ANKRD42|338699|ankyrin repeat domain 42##AK311356|DKFZp547G183|55525|uncharacterized LOC55525##BC067764|CCDC90B|60492|coiled-coil domain containing 90B##AF182412|CCDC90B|60492|coiled-coil domain containing 90B##AF182424|CCDC90B|60492|coiled-coil domain containing 90B##AK055972|CCDC90B|60492|coiled-coil domain containing 90B##BC020783|CCDC90B|60492|coiled-coil domain containing 90B##AK225726|CCDC90B|60492|coiled-coil domain containing 90B##BC017771|CCDC90B|60492|coiled-coil domain containing 90B##BC032701|CCDC90B|60492|coiled-coil domain containing 90B##BC014573|CCDC90B|60492|coiled-coil domain containing 90B##AL136791|CCDC90B|60492|coiled-coil domain containing 90B##AF271782|CCDC90B|60492|coiled-coil domain containing 90B##NM_021825|CCDC90B|60492|coiled-coil domain containing 90B##BC048795|CCDC90B|60492|coiled-coil domain containing 90B##AK304769|CCDC90B|60492|coiled-coil domain containing 90B##AK315787|CCDC90B|60492|coiled-coil domain containing 90B##BC107755|CCDC90B|60492|coiled-coil domain containing 90B##AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)	0.06683	
chr1	19248156	19248327	reg1032926.p1	4.129	+	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-19087	-	AK294552 NM_001161504	-30857	-	NM_152232 AB527225	-62086	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	34558	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	288505	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	329751	-	DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##NM_001136265|IFFO2|126917|intermediate filament family orphan 2##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090	0.091619	
chr12	110562173	110562267	reg1030025.p1	4.129	+	AK097461 NM_207435	-56721	-	TSC_hg19_v1_chr12_-_110486328 AK021447 BC041968	-75891	-	AK302535 BC032833 TSC_hg19_v1_chr12_+_110437393 CU691256 AY364251	-124777	+	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	1	+	TSC_hg19_v1_chr12_+_110719041 NM_001681 NM_170665	156815	+	TSC_hg19_v1_chr12_+_110719528 M23114 BC035588 M23115 CU690124	157148	+	AK097461|C12orf76|400073|chromosome 12 open reading frame 76##NM_207435|C12orf76|400073|chromosome 12 open reading frame 76##AK021447|C12orf76|400073|chromosome 12 open reading frame 76##BC041968|C12orf76|400073|chromosome 12 open reading frame 76##AK302535|ANKRD13A|88455|ankyrin repeat domain 13A##BC032833|ANKRD13A|88455|ankyrin repeat domain 13A##AY364251|ANKRD13A|88455|ankyrin repeat domain 13A##NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_001681|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_170665|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23114|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC035588|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23115|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	0.0123	
chr14	102197679	102197838	reg1034207.p1	4.129	+	BX161470 NM_001362 S79854 TSC_hg19_v1_chr14_+_102027831 AK292310 BC017717	-169995	+	BC150617 NM_001134888	-846575	-	AK092707 TSC_hg19_v1_chr14_+_101300861	-896923	+	NM_001161725 NM_001161726 TSC_hg19_v1_chr14_+_102228166 AL834350 BC051442 AK131391 AK302470	30428	+	TSC_hg19_v1_chr14_+_102276171 NM_002719 NM_178586 NM_178587 AK295449 AK315072 Z69030 U37352 BC016183	78425	+	AB451341 CU677587 D26445 AB463199 L42375 TSC_hg19_v1_chr14_+_102276338	78551	+	BX161470|DIO3|1735|deiodinase, iodothyronine, type III##NM_001362|DIO3|1735|deiodinase, iodothyronine, type III##S79854|DIO3|1735|deiodinase, iodothyronine, type III##BC017717|DIO3|1735|deiodinase, iodothyronine, type III##BC150617|RTL1|388015|retrotransposon-like 1##NM_001134888|RTL1|388015|retrotransposon-like 1##AK092707|MEG3|55384|maternally expressed 3 (non-protein coding)##NM_001161725|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_001161726|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AL834350|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC051442|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK131391|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK302470|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_002719|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178586|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178587|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK315072|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##Z69030|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##U37352|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC016183|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AB451341|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##D26445|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##L42375|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	0.041461	
chr14	103230707	103230861	reg1029402.p2	4.129	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-171623	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	-171786	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-254670	-	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	13035	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	13116	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	158214	+	AF155595|RCOR1|23186|REST corepressor 1##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)	0.0	
chr19	771398	771494	reg1027342.p1	4.129	+	TSC_hg19_v1_chr19_+_751132 BC052236 BX648389 BC042125 NM_173481	-20317	+	TSC_hg19_v1_chr19_+_708934 NM_001040134 NM_002579 AK299809 AK315168 BC032449 Y14770	-62497	+	BC137161 BC144505 NM_214710	-75986	-	TSC_hg19_v1_chr19_+_797414 NM_002819 NM_031990 NM_031991 NM_175847 X66975 BC002397 BC023219	25970	+	TSC_hg19_v1_chr19_+_797446 AB208910	25999	+	TSC_hg19_v1_chr19_+_797448 X62006 X65371 X65372	26003	+	BC052236|C19orf21|126353|chromosome 19 open reading frame 21##BX648389|C19orf21|126353|chromosome 19 open reading frame 21##BC042125|C19orf21|126353|chromosome 19 open reading frame 21##NM_173481|C19orf21|126353|chromosome 19 open reading frame 21##NM_001040134|PALM|5064|paralemmin##NM_002579|PALM|5064|paralemmin##AK315168|PALM|5064|paralemmin##BC032449|PALM|5064|paralemmin##Y14770|PALM|5064|paralemmin##BC137161|PRSS57|400668|protease, serine, 57##BC144505|PRSS57|400668|protease, serine, 57##NM_214710|PRSS57|400668|protease, serine, 57##NM_002819|PTBP1|5725|polypyrimidine tract binding protein 1##NM_031990|PTBP1|5725|polypyrimidine tract binding protein 1##NM_031991|PTBP1|5725|polypyrimidine tract binding protein 1##NM_175847|PTBP1|5725|polypyrimidine tract binding protein 1##X66975|PTBP1|5725|polypyrimidine tract binding protein 1##BC002397|PTBP1|5725|polypyrimidine tract binding protein 1##BC023219|PTBP1|5725|polypyrimidine tract binding protein 1##AB208910|PTBP1|5725|polypyrimidine tract binding protein 1##X62006|PTBP1|5725|polypyrimidine tract binding protein 1##X65371|PTBP1|5725|polypyrimidine tract binding protein 1##X65372|PTBP1|5725|polypyrimidine tract binding protein 1	0.018332	
chr4	1261579	1261759	reg1007035.p1	4.129	+	TSC_hg19_v1_chr4_+_1243060 AK125775 AK056133	-18501	+	TSC_hg19_v1_chr4_-_1242910 BC072021 BC053320 NM_001012614 NM_001328 BC098400	-18761	-	AB527760 DQ891918 DQ895102 TSC_hg19_v1_chr4_-_1242878 AF091555 BC011655 U37408	-18859	-	TSC_hg19_v1_chr4_+_1283678 BC001225 NM_001017405 NM_005882 AK001088 AK022586 AK094253 AK300572	22001	+	TSC_hg19_v1_chr4_+_1283693 AK296174 AK022515 AY236486 AK308901 AF084928 BC006470 AY189687 BT006957	22037	+	TSC_hg19_v1_chr4_+_1341031 BC110331 AB040963 NM_020894 BC140901	79599	+	AK125775|C4orf42|92070|chromosome 4 open reading frame 42##AK056133|C4orf42|92070|chromosome 4 open reading frame 42##BC072021|CTBP1|1487|C-terminal binding protein 1##BC053320|CTBP1|1487|C-terminal binding protein 1##NM_001012614|CTBP1|1487|C-terminal binding protein 1##NM_001328|CTBP1|1487|C-terminal binding protein 1##BC098400|CTBP1|1487|C-terminal binding protein 1##DQ891918|CTBP1|1487|C-terminal binding protein 1##DQ895102|CTBP1|1487|C-terminal binding protein 1##AF091555|CTBP1|1487|C-terminal binding protein 1##BC011655|CTBP1|1487|C-terminal binding protein 1##U37408|CTBP1|1487|C-terminal binding protein 1##BC001225|MAEA|10296|macrophage erythroblast attacher##NM_001017405|MAEA|10296|macrophage erythroblast attacher##NM_005882|MAEA|10296|macrophage erythroblast attacher##AK001088|MAEA|10296|macrophage erythroblast attacher##AK022586|MAEA|10296|macrophage erythroblast attacher##AK094253|MAEA|10296|macrophage erythroblast attacher##AK300572|MAEA|10296|macrophage erythroblast attacher##AK296174|MAEA|10296|macrophage erythroblast attacher##AK022515|MAEA|10296|macrophage erythroblast attacher##AY236486|MAEA|10296|macrophage erythroblast attacher##AK308901|MAEA|10296|macrophage erythroblast attacher##AF084928|MAEA|10296|macrophage erythroblast attacher##BC006470|MAEA|10296|macrophage erythroblast attacher##AY189687|MAEA|10296|macrophage erythroblast attacher##BT006957|MAEA|10296|macrophage erythroblast attacher##BC110331|KIAA1530|57654|KIAA1530##AB040963|KIAA1530|57654|KIAA1530##NM_020894|KIAA1530|57654|KIAA1530##BC140901|KIAA1530|57654|KIAA1530	0.0	
chr8	222795	222976	reg1033355.p2	4.129	+	NM_173539 AK093442 AX748129 TSC_hg19_v1_chr8_+_182396 AK313454 NM_001042415 NM_001042416 BC026190	-40543	+	AK127000 TSC_hg19_v1_chr8_-_182246 BC064938 BC052779	-40613	-	NM_001005504	-105862	-	AF419858 NM_012173 NM_183420 NM_183421 TSC_hg19_v1_chr8_+_356923	133980	+	TSC_hg19_v1_chr8_+_356957 BC050393	134099	+	TSC_hg19_v1_chr8_-_494835 AY194292 FJ381685 BC136248 BC136249	272030	-	NM_173539|ZNF596|169270|zinc finger protein 596##AK313454|ZNF596|169270|zinc finger protein 596##NM_001042415|ZNF596|169270|zinc finger protein 596##NM_001042416|ZNF596|169270|zinc finger protein 596##BC026190|ZNF596|169270|zinc finger protein 596##AK127000|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC064938|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC052779|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21##AF419858|FBXO25|26260|F-box protein 25##NM_012173|FBXO25|26260|F-box protein 25##NM_183420|FBXO25|26260|F-box protein 25##NM_183421|FBXO25|26260|F-box protein 25##BC050393|FBXO25|26260|F-box protein 25##AY194292|C8orf42|157695|chromosome 8 open reading frame 42##BC136248|C8orf42|157695|chromosome 8 open reading frame 42##BC136249|C8orf42|157695|chromosome 8 open reading frame 42	0.0	
chr9	100232502	100232616	reg1036305.p1	4.129	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	-58180	+	TSC_hg19_v1_chr9_+_100174364 NM_014290 BC028694	-58286	+	NM_020893 CR749320	-162621	+	NM_001166116 AK314533	30903	+	TSC_hg19_v1_chr9_+_100263947 BC002660 NM_003275	31379	+	TSC_hg19_v1_chr9_-_100395642 AK094043 AK291199 AX748426 BC035604 BX648493 BX538308 AK128615	163070	-	AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7##NM_014290|TDRD7|23424|tudor domain containing 7##BC028694|TDRD7|23424|tudor domain containing 7##NM_020893|C9orf174|100499483|chromosome 9 open reading frame 174##CR749320|C9orf174|100499483|chromosome 9 open reading frame 174##NM_001166116|TMOD1|7111|tropomodulin 1##AK314533|TMOD1|7111|tropomodulin 1##BC002660|TMOD1|7111|tropomodulin 1##NM_003275|TMOD1|7111|tropomodulin 1##AK094043|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK291199|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BC035604|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX648493|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX538308|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK128615|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2	0.011684	
chr9	127534177	127534357	reg1011613.p2	4.129	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	-757	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	-113563	+	TSC_hg19_v1_chr9_-_127269711 BC032501 NM_004959	-264563	-	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	5233	+	BC150645 BC171828 BC171830 BC171837 BC127949 TSC_hg19_v1_chr9_+_127615749 NM_001045476	81457	+	TSC_hg19_v1_chr9_-_127624226 BC071915 U12465 BC000348 AK291072 BC010919 D28448 NM_007209	89950	-	HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A##BC150645|WDR38|401551|WD repeat domain 38##BC171828|WDR38|401551|WD repeat domain 38##BC171830|WDR38|401551|WD repeat domain 38##BC171837|WDR38|401551|WD repeat domain 38##BC127949|WDR38|401551|WD repeat domain 38##NM_001045476|WDR38|401551|WD repeat domain 38##BC071915|RPL35|11224|ribosomal protein L35##U12465|RPL35|11224|ribosomal protein L35##BC000348|RPL35|11224|ribosomal protein L35##AK291072|RPL35|11224|ribosomal protein L35##BC010919|RPL35|11224|ribosomal protein L35##D28448|RPL35|11224|ribosomal protein L35##NM_007209|RPL35|11224|ribosomal protein L35	0.0	
chr12	93919268	93919367	reg1029439.p1	4.128	+	NM_014050 NM_172177 TSC_hg19_v1_chr12_+_93861292 AF135160 AF078860 AL136659 AK000285 AF151038 CR749344	-58038	+	TSC_hg19_v1_chr12_-_93836008 NM_003348	-83293	-	TSC_hg19_v1_chr12_-_93835724 BC000396	-83579	-	NM_003877	44280	+	TSC_hg19_v1_chr12_-_93964654 AK123812	45346	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	45503	+	NM_014050|MRPL42|28977|mitochondrial ribosomal protein L42##NM_172177|MRPL42|28977|mitochondrial ribosomal protein L42##AF135160|MRPL42|28977|mitochondrial ribosomal protein L42##AF078860|MRPL42|28977|mitochondrial ribosomal protein L42##AL136659|MRPL42|28977|mitochondrial ribosomal protein L42##AK000285|MRPL42|28977|mitochondrial ribosomal protein L42##AF151038|MRPL42|28977|mitochondrial ribosomal protein L42##CR749344|MRPL42|28977|mitochondrial ribosomal protein L42##NM_003348|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC000396|UBE2N|7334|ubiquitin-conjugating enzyme E2N##NM_003877|SOCS2|8835|suppressor of cytokine signaling 2##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2	0.825888	CTCF.p2:12:0.826
chr13	33727672	33727806	reg1036877.p1	4.128	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-137216	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-567056	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-567100	+	AY082590 BC046563 NM_001243466 NM_178007	32476	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	52425	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	132128	-	AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr13	39591055	39591183	reg1033372.p2	4.128	+	DQ891676 EU176604 AK313632 BC025760 AK304159 NM_001144033 NM_145286	-26193	-	NM_207361	-329947	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	-667070	+	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	21082	-	TSC_hg19_v1_chr13_-_39612251 NM_025138 NM_170719	21134	-	TSC_hg19_v1_chr13_+_39612534 AL833329 NM_001012754 NM_001017370 BX648122 BC052492 BC140877 BC140878 CR749318 AK300260 AK299198 BX647872	21416	+	DQ891676|STOML3|161003|stomatin (EPB72)-like 3##EU176604|STOML3|161003|stomatin (EPB72)-like 3##AK313632|STOML3|161003|stomatin (EPB72)-like 3##BC025760|STOML3|161003|stomatin (EPB72)-like 3##AK304159|STOML3|161003|stomatin (EPB72)-like 3##NM_001144033|STOML3|161003|stomatin (EPB72)-like 3##NM_145286|STOML3|161003|stomatin (EPB72)-like 3##NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2##AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1##NM_025138|PROSER1|80209|proline and serine rich 1##NM_170719|PROSER1|80209|proline and serine rich 1##AL833329|NHLRC3|387921|NHL repeat containing 3##NM_001012754|NHLRC3|387921|NHL repeat containing 3##NM_001017370|NHLRC3|387921|NHL repeat containing 3##BX648122|NHLRC3|387921|NHL repeat containing 3##BC052492|NHLRC3|387921|NHL repeat containing 3##BC140877|NHLRC3|387921|NHL repeat containing 3##BC140878|NHLRC3|387921|NHL repeat containing 3##CR749318|NHLRC3|387921|NHL repeat containing 3##AK300260|NHLRC3|387921|NHL repeat containing 3##AK299198|NHLRC3|387921|NHL repeat containing 3##BX647872|NHLRC3|387921|NHL repeat containing 3	0.9963	CTCF.p2:12:0.996
chr13	91073092	91073216	reg1035208.p2	4.128	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-2748285	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-4699715	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-6616654	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	977750	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	2806273	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	4058672	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.0	
chr16	29827364	29827515	reg1021459.p1	4.128	+	TSC_hg19_v1_chr16_+_29823563 AK092265 AX747441 AL834185 BC053594	-3855	+	NM_145239 TSC_hg19_v1_chr16_+_29823510 AK292393 AK074572 AK225785 BC011405 AK098379	-3966	+	L01420 BC041629 AB209061 TSC_hg19_v1_chr16_+_29818849	-8664	+	TSC_hg19_v1_chr16_+_29827522 NM_024516	77	+	TSC_hg19_v1_chr16_+_29827809 BC003640 EF195235 CU678552	337	+	NM_005115 NM_017458 TSC_hg19_v1_chr16_+_29831736	4286	+	AK092265|PRRT2|112476|proline-rich transmembrane protein 2##AL834185|PRRT2|112476|proline-rich transmembrane protein 2##BC053594|PRRT2|112476|proline-rich transmembrane protein 2##NM_145239|PRRT2|112476|proline-rich transmembrane protein 2##AK292393|PRRT2|112476|proline-rich transmembrane protein 2##AK074572|PRRT2|112476|proline-rich transmembrane protein 2##AK225785|PRRT2|112476|proline-rich transmembrane protein 2##BC011405|PRRT2|112476|proline-rich transmembrane protein 2##AK098379|PRRT2|112476|proline-rich transmembrane protein 2##L01420|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##BC041629|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##AB209061|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##NM_024516|C16orf53|79447|chromosome 16 open reading frame 53##BC003640|C16orf53|79447|chromosome 16 open reading frame 53##EF195235|C16orf53|79447|chromosome 16 open reading frame 53##NM_005115|MVP|9961|major vault protein##NM_017458|MVP|9961|major vault protein	0.0	
chr16	67970762	67970914	reg1029517.p1	4.128	+	TSC_hg19_v1_chr16_-_67970754 AK312208 Y13640 AK225658 AK298012 NM_002801	-82	-	AB464083 BT019723 BT019724 CR456982 CU690910 BC052369 BC017198 TSC_hg19_v1_chr16_-_67970733	-146	-	CU687738 BC063475 AK223172 X71877 BC039716 NM_001907	-5073	-	M26268 TSC_hg19_v1_chr16_-_67978024 BT009748 BC014781 NM_000229	7175	-	AK310027 TSC_hg19_v1_chr16_-_67978467	7606	-	AK316415 AK097808 AK302790 NM_001145963	27119	-	AK312208|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##Y13640|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##AK225658|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##AK298012|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##NM_002801|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BT019723|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BT019724|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##CR456982|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BC052369|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BC017198|PSMB10|5699|proteasome (prosome, macropain) subunit, beta type, 10##BC063475|CTRL|1506|chymotrypsin-like##AK223172|CTRL|1506|chymotrypsin-like##X71877|CTRL|1506|chymotrypsin-like##BC039716|CTRL|1506|chymotrypsin-like##NM_001907|CTRL|1506|chymotrypsin-like##M26268|LCAT|3931|lecithin-cholesterol acyltransferase##BT009748|LCAT|3931|lecithin-cholesterol acyltransferase##BC014781|LCAT|3931|lecithin-cholesterol acyltransferase##NM_000229|LCAT|3931|lecithin-cholesterol acyltransferase##AK310027|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK316415|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK097808|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK302790|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_001145963|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4	0.0	
chr17	7836432	7836578	reg1032916.p1	4.128	+	NM_001037144 NM_053051 AY160226 AY160227 TSC_hg19_v1_chr17_+_7835522 AK293076 AF331638 BC021134 AL833907	-976	+	AB528455 DQ890860 DQ894015 BC025413 TSC_hg19_v1_chr17_-_7835265 BC032717 AK314038 NM_021210 NM_001166621	-1245	-	AF016411 BC096232 BC096233 BC096234 BC099634 NM_004732	-3753	-	DQ426876 NM_000180 M92432	69446	+	AK298095 NM_001039130 NM_001039131 NM_001141 AK292779 AK300554 BC063647 U78294 BC035217 BC033294 AB590334 DQ891345 EU176579 AF468051 AF468052 AF468053 AF468054	105907	+	TSC_hg19_v1_chr17_+_7960201 AK092613 AX747630	123697	+	NM_001037144|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##NM_053051|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160226|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160227|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AK293076|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AF331638|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##BC021134|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AL833907|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##DQ890860|TRAPPC1|58485|trafficking protein particle complex 1##DQ894015|TRAPPC1|58485|trafficking protein particle complex 1##BC025413|TRAPPC1|58485|trafficking protein particle complex 1##BC032717|TRAPPC1|58485|trafficking protein particle complex 1##AK314038|TRAPPC1|58485|trafficking protein particle complex 1##NM_021210|TRAPPC1|58485|trafficking protein particle complex 1##NM_001166621|TRAPPC1|58485|trafficking protein particle complex 1##AF016411|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096232|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096233|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096234|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC099634|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_004732|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_000180|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##M92432|GUCY2D|3000|guanylate cyclase 2D, membrane (retina-specific)##AK298095|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039130|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001039131|ALOX15B|247|arachidonate 15-lipoxygenase, type B##NM_001141|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK292779|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AK300554|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC063647|ALOX15B|247|arachidonate 15-lipoxygenase, type B##U78294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC035217|ALOX15B|247|arachidonate 15-lipoxygenase, type B##BC033294|ALOX15B|247|arachidonate 15-lipoxygenase, type B##DQ891345|ALOX15B|247|arachidonate 15-lipoxygenase, type B##EU176579|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468051|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468052|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468053|ALOX15B|247|arachidonate 15-lipoxygenase, type B##AF468054|ALOX15B|247|arachidonate 15-lipoxygenase, type B	0.028814	
chr18	13003522	13003689	reg1034220.p1	4.128	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-12260	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-55541	+	TSC_hg19_v1_chr18_+_12948009 AK314403	-55599	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	215180	+	NM_001003674 NM_001003675	608059	+	AF009426 AF009427 NM_004338 NM_181483	617261	+	AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##AK314403|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1	1.827927	CTCF.p2:62:0.939	CTCF.p2:-84:0.889
chr2	150655971	150656070	reg1028595.p1	4.128	+	TSC_hg19_v1_chr2_-_150444290 NM_015702	-211713	-	TSC_hg19_v1_chr2_-_150444250 BC023995 BC010894 AK310001 AF161510 BC022859 BC000932	-211763	-	AF131802 TSC_hg19_v1_chr2_-_150444230 AK313284	-211795	-	X97758 BC012513 TSC_hg19_v1_chr2_-_151344182 AK298007 AK311312 NM_005168 AK313224	688144	-	TSC_hg19_v1_chr2_-_152118378 BC136410 BC136411 AK127552 NM_198557	1462313	-	TSC_hg19_v1_chr2_-_152146171 BC001268	1490132	-	NM_015702|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC023995|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC010894|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK310001|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF161510|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC022859|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC000932|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF131802|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK313284|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##X97758|RND3|390|Rho family GTPase 3##BC012513|RND3|390|Rho family GTPase 3##AK298007|RND3|390|Rho family GTPase 3##NM_005168|RND3|390|Rho family GTPase 3##AK313224|RND3|390|Rho family GTPase 3##BC136410|RBM43|375287|RNA binding motif protein 43##BC136411|RBM43|375287|RNA binding motif protein 43##AK127552|RBM43|375287|RNA binding motif protein 43##NM_198557|RBM43|375287|RNA binding motif protein 43##BC001268|NMI|9111|N-myc (and STAT) interactor	0.031221	
chr2	201936578	201936758	reg1035359.p2	4.128	+	NM_002491 BC018183 AF047183 AF035839 TSC_hg19_v1_chr2_+_201936724	-60	+	TSC_hg19_v1_chr2_-_201936395 AK124184 BC039295 NM_173822	-266	-	AK315104 TSC_hg19_v1_chr2_-_201936386 AL832346	-281	-	TSC_hg19_v1_chr2_-_201967706 D28373	31036	-	TSC_hg19_v1_chr2_+_201980874 AK296036 NM_001127184 NM_001202516 NM_001202517 NM_001202519 NM_003879 AK297387 AF005774	44227	+	AF009616 TSC_hg19_v1_chr2_+_201981056 AF010127 U97074 AK315924 BC001602 AB209600	44373	+	NM_002491|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa##BC018183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa##AF047183|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa##AF035839|NDUFB3|4709|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa##AK124184|FAM126B|285172|family with sequence similarity 126, member B##BC039295|FAM126B|285172|family with sequence similarity 126, member B##NM_173822|FAM126B|285172|family with sequence similarity 126, member B##AK315104|FAM126B|285172|family with sequence similarity 126, member B##AL832346|FAM126B|285172|family with sequence similarity 126, member B##AK296036|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001127184|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202516|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202517|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202519|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_003879|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK297387|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF005774|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF009616|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF010127|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##U97074|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK315924|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##BC001602|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AB209600|CFLAR|8837|CASP8 and FADD-like apoptosis regulator	0.0	
chr3	197476561	197476665	reg1032343.p2	4.128	+	NM_001145642	-46	-	AK303462 NM_001011537	-190	+	TSC_hg19_v1_chr3_-_197463770 BC033615 NM_014687	-12827	-	BC035006 NM_032288 TSC_hg19_v1_chr3_+_197476753 BC039734 AK027672	79	+	TSC_hg19_v1_chr3_+_197476768 AL136558 AK315019 AJ344094 AK296283 AB528139 AM393053 CR533502	193	+	TSC_hg19_v1_chr3_+_197477223 AK302546	628	+	NM_001145642|KIAA0226|9711|KIAA0226##AK303462|FYTTD1|84248|forty-two-three domain containing 1##NM_001011537|FYTTD1|84248|forty-two-three domain containing 1##BC033615|KIAA0226|9711|KIAA0226##NM_014687|KIAA0226|9711|KIAA0226##BC035006|FYTTD1|84248|forty-two-three domain containing 1##NM_032288|FYTTD1|84248|forty-two-three domain containing 1##BC039734|FYTTD1|84248|forty-two-three domain containing 1##AK027672|FYTTD1|84248|forty-two-three domain containing 1##AL136558|FYTTD1|84248|forty-two-three domain containing 1##AK315019|FYTTD1|84248|forty-two-three domain containing 1##AJ344094|FYTTD1|84248|forty-two-three domain containing 1##AK296283|FYTTD1|84248|forty-two-three domain containing 1##AM393053|FYTTD1|84248|forty-two-three domain containing 1##CR533502|FYTTD1|84248|forty-two-three domain containing 1##AK302546|FYTTD1|84248|forty-two-three domain containing 1	0.0	
chr8	70725768	70725936	reg1029494.p1	4.128	+	AY101175 TSC_hg19_v1_chr8_+_70405081 AK055607 BX571746	-320763	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	-320813	+	TSC_hg19_v1_chr8_+_70379077 AK307951	-346772	+	BC137424 BC144618 NM_001146009	19551	-	AK022760 NM_001146008	19772	-	AK308488 AF205075 AK096879 NM_030958	21397	-	AY101175|SULF1|23213|sulfatase 1##AK055607|SULF1|23213|sulfatase 1##BX571746|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	0.0	
chr9	89123511	89123691	reg1034199.p1	4.128	+	TSC_hg19_v1_chr9_-_88969326 AL832193 CR936608 AK055546 CR933644 AL832026 BX641077 CR933643 BC111003 NM_001185059 NM_001185074 NM_024617	-154228	-	AK308352 TSC_hg19_v1_chr9_-_88969321 BC032456	-154312	-	AB528754 AM393721 TSC_hg19_v1_chr9_-_88897454 BC053900 BC071621 AY015642 AL834356 AF284752 BC002675 AK055643 AK225937 AK309289 NM_030940	-226157	-	L13698 NM_002048	438502	-	AK127445 NM_001001709 BC132741 BC136791 HQ258059	640000	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	988985	+	AL832193|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR936608|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AK055546|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933644|ZCCHC6|79670|zinc finger, CCHC domain containing 6##AL832026|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BX641077|ZCCHC6|79670|zinc finger, CCHC domain containing 6##CR933643|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC111003|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185059|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_001185074|ZCCHC6|79670|zinc finger, CCHC domain containing 6##NM_024617|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC032456|ZCCHC6|79670|zinc finger, CCHC domain containing 6##BC053900|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC071621|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AY015642|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AL834356|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AF284752|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##BC002675|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK055643|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##AK225937|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##NM_030940|ISCA1|81689|iron-sulfur cluster assembly 1 homolog (S. cerevisiae)##L13698|GAS1|2619|growth arrest-specific 1##NM_002048|GAS1|2619|growth arrest-specific 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1	0.0	
chrX	21857645	21857758	reg1023884.p2	4.128	+	NM_015884 TSC_hg19_v1_chrX_+_21857734	-2	+	BC005948 AF129505 AJ250584 NM_014332 AK312134	-81484	-	BC109031 AK092279 AX747450 NM_153270	-181270	-	TSC_hg19_v1_chrX_+_21857746 AK292933 AF019612 BC036465	58	+	TSC_hg19_v1_chrX_+_21857776 BC012905	75	+	TSC_hg19_v1_chrX_+_21857790 AK312474 AB385581 CU690354	117	+	NM_015884|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2##BC005948|SMPX|23676|small muscle protein, X-linked##AF129505|SMPX|23676|small muscle protein, X-linked##AJ250584|SMPX|23676|small muscle protein, X-linked##NM_014332|SMPX|23676|small muscle protein, X-linked##AK312134|SMPX|23676|small muscle protein, X-linked##BC109031|KLHL34|257240|kelch-like 34 (Drosophila)##AK092279|KLHL34|257240|kelch-like 34 (Drosophila)##NM_153270|KLHL34|257240|kelch-like 34 (Drosophila)##AK292933|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2##AF019612|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2##BC036465|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2##AK312474|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2	0.0	
chr10	45875622	45875771	reg1039614.p1	4.127	+	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	-5999	+	TSC_hg19_v1_chr10_+_45869638 AB208946 NM_000698 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223	-6059	+	AK131555 NM_001004297	-64641	-	AK313340 BC025394 NM_001002266 AK307667	155123	-	TSC_hg19_v1_chr10_-_46090318 BC066988 NM_001002265 NM_145021	214598	-	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	292518	-	BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase##AB208946|ALOX5|240|arachidonate 5-lipoxygenase##NM_000698|ALOX5|240|arachidonate 5-lipoxygenase##AK225603|ALOX5|240|arachidonate 5-lipoxygenase##BC130332|ALOX5|240|arachidonate 5-lipoxygenase##BC132677|ALOX5|240|arachidonate 5-lipoxygenase##BC143985|ALOX5|240|arachidonate 5-lipoxygenase##BC143986|ALOX5|240|arachidonate 5-lipoxygenase##AK315223|ALOX5|240|arachidonate 5-lipoxygenase##AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##AK313340|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC025394|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002266|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK307667|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC066988|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002265|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_145021|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4	0.0	
chr11	115086726	115086793	reg1032403.p2	4.127	+	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-537511	+	AK000134 AK225236 TSC_hg19_v1_chr11_-_114466485 NM_001077639 NM_017678	-620281	-	AY358805 TSC_hg19_v1_chr11_-_114466403	-620354	-	AY309502 TSC_hg19_v1_chr11_-_115088658	1889	-	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	288421	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	1556939	-	NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##AK000134|FAM55D|54827|family with sequence similarity 55, member D##AK225236|FAM55D|54827|family with sequence similarity 55, member D##NM_001077639|FAM55D|54827|family with sequence similarity 55, member D##NM_017678|FAM55D|54827|family with sequence similarity 55, member D##AY358805|FAM55D|54827|family with sequence similarity 55, member D##AY309502|CADM1|23705|cell adhesion molecule 1##AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)	0.030334	
chr12	131586429	131586553	reg1033625.p1	4.127	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-148038	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-229780	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-229866	+	TSC_hg19_v1_chr12_+_132195623 BC142980	609122	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	609165	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	726475	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.0	
chr12	48153306	48153406	reg1026577.p2	4.127	+	AK092448 NM_001098531	-482	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	-947	-	AK314688 BC069715 BC069698 BC074763 AX772808 AK300169 AK075446 BC111782 M32402 M36109 NM_001172439 NM_001172440 NM_006025	-34067	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	13678	+	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	60308	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	145445	-	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK314688|ENDOU|8909|endonuclease, polyU-specific##BC069715|ENDOU|8909|endonuclease, polyU-specific##BC069698|ENDOU|8909|endonuclease, polyU-specific##BC074763|ENDOU|8909|endonuclease, polyU-specific##AX772808|ENDOU|8909|endonuclease, polyU-specific##AK300169|ENDOU|8909|endonuclease, polyU-specific##AK075446|ENDOU|8909|endonuclease, polyU-specific##BC111782|ENDOU|8909|endonuclease, polyU-specific##M32402|ENDOU|8909|endonuclease, polyU-specific##M36109|ENDOU|8909|endonuclease, polyU-specific##NM_001172439|ENDOU|8909|endonuclease, polyU-specific##NM_001172440|ENDOU|8909|endonuclease, polyU-specific##NM_006025|ENDOU|8909|endonuclease, polyU-specific##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor	0.568113	CTCF.p2:4:0.568
chr12	51051298	51051479	reg1031394.p2	4.127	+	TSC_hg19_v1_chr12_+_50898778 BC075027	-152489	+	TSC_hg19_v1_chr12_+_50898767 AK091597 AX747083 NM_173602	-152633	+	TSC_hg19_v1_chr12_+_50869532 AF131755	-181801	+	TSC_hg19_v1_chr12_+_51157883 NM_005171 AK313406 BC029619	106490	+	TSC_hg19_v1_chr12_+_51158275 AK299240	106870	+	NM_182559 BC035123 BC048112 CU690554	185335	+	BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##AK091597|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##NM_173602|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_005171|ATF1|466|activating transcription factor 1##AK313406|ATF1|466|activating transcription factor 1##BC029619|ATF1|466|activating transcription factor 1##AK299240|ATF1|466|activating transcription factor 1##NM_182559|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC035123|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC048112|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12	0.0	
chr14	106477999	106478099	reg1029917.p1	4.127	+	GQ232825 GU552779 GU552687 GU552689 AY003848 FJ873924 FJ873955 GQ232946 HM116167 EF407847 EU350414 GQ232973 HM774711 EF407839 EF441752 U86801 AF211930 AM279559 HM774196 EU099286 EU146322 L04328 L04336 L04337 L33037 AY062319 FJ385375 FJ385408 FJ385414 FJ385418 FJ385419 HM774332 HM774418 HM774599 HM774606 AF103282 EU099067 EU099203 EU099287 EU146373 EU146380 FJ385394 EU099221 EU099283 AF306375 AF306376 AM259139 AY062320 AY392849 AY393007 AY393013 AY393111 AY393223 AY393232 AY393255 AY393368 AY393531 AY393610 AY393666 DQ100814 EU099253 HM996275 AY033262 AY033283 EF177964 FJ385299 AB022655 AB067168 AB067394 AF022000 AJ239360 AJ414006 AY553644 AY553647 AY885171 DQ926345 FJ039788 HM152522 M17750 M17751 U00569 U00580 AY686877 AY944696 DQ535282 DQ535443 DQ535465 DQ535484 EF178053 EF178130 FJ195468 FJ195471 HM152519 AF062134 AF062139 AF062140 AF062142 AF062221 L01278 X65883 X65885 X65887 X65888 X65891 X65892 X65893 Z47274 Z47275 Z47276 Z47277 Z80847 BC075840 TSC_hg19_v1_chr14_-_106471733 BX640724 AK097348 AK126543 AK304469 BX640847 S42403	-6392	-	TSC_hg19_v1_chr14_-_106453169 X17117 AK129517 AK130825 BC065733 X59702	-24879	-	U32200 U32268 U32334 U32335 U32336 U32488 U32490 U32599 U32608 U32609 U32947 U32948 U32950 U32963 U33799 U33801 AF028098 AF028106 AF028107 AF028114 AF028118 AY155550 AY155551 DQ454559 AF460797 AF460726 AF460724 AF460827 DQ454629 DQ454614 DQ454962 GQ232822 DQ454705 DQ523871 DQ454580 DQ523917 DQ523919 AY003767 DQ454466 DQ454560 DQ454565 DQ454682 EU099268 GU552685 AY003808 AY003836 DQ454469 DQ454795 DQ454971 DQ454985 DQ454452 DQ454571 DQ454944 DQ454960 DQ523896 EF583670 DQ454558 DQ454677 DQ454859 DQ454868 DQ455000 DQ523852 DQ523901 DQ454442 DQ523848 HQ704012 DQ100720 DQ454840 DQ454949 FJ840328 FJ873931 HM116191 GQ232887 AJ487491 AJ487492 AJ487493 AJ487498 AJ487506 AY003837 JF810257 AF069907 EF091912 EF175411 EF175427 EF583661 EU350413 EU433868 EU433869 EU433881 EU667601 EU667602 FJ694875 GQ232782 GQ232813 GQ232814 GQ232841 GQ232875 GQ232936 GQ232966 GQ232996 JF810256 GQ232768 EF441747 EF583659 AF103205 AF103114 EF566909 U86787 AF484410 HQ392886 JF894284 AM279467 AM279468 AM279469 AM279470 AM279471 AM279552 AM279555 AM279588 AM279641 AF308558 EU099276 GQ232957 AF408722 HM774202 EU099163 HM774025 HM774888 HM775065 JN110525 JN110528 JN111117 L04330 L04332 L04340 FJ385388 FJ385429 GQ504861 HM774080 HM774150 HM774407 HM774529 HM774561 HM774885 HQ704005 HQ704037 S73138 AF103263 AF082193 AJ008249 AY099261 AY206987 AY998750 DQ097896 EU099144 EU099173 EU099285 AF402947 X94432 AM183993 AY393351 EU099152 EU099269 EU099281 AF306372 AJ236544 AJ271548 AY193806 AY376076 AY376077 AY376090 AY393002 AY393003 AY393011 AY393020 AY393107 AY393113 AY393114 AY393116 AY393122 AY393139 AY393140 AY393227 AY393228 AY393241 AY393250 AY393254 AY393257 AY393259 AY393354 AY393357 AY393363 AY393377 AY393497 AY393500 AY393506 AY393509 AY393511 AY393533 AY393613 AY393616 AY393617 AY393633 AY393637 AY393653 AY393671 AY393676 EU099082 EU099119 EU099146 JF894280 HM995126 JN159306 HM995172 HM995197 HM995672 AY941929 DQ100708 DQ100722 DQ523939 DQ523940 DQ524004 DQ524046 DQ524048 DQ524070 DQ524135 HM994894 HM995065 HM995066 HM995070 HM995071 HM995072 HM995073 HM995088 HM995175 HM995192 HM995193 HM995194 HM995195 HM995196 HM995198 HM995281 HM995297 HM995349 HM995351 HM995538 HM995541 HM995542 HM995586 HM995587 HM995589 HM995591 HM995593 HM995610 HM995612 HM995613 HM996403 HM996541 AY971055 DQ926099 AB063667 AB063719 AB063917 AB066970 AB066981 AB067004 AB067009 AB067029 AB067072 AB067119 AB067126 AB067131 AB067253 AB363079 AB363093 AB363142 AB363149 AB363155 AF035019 AF035020 AF209860 AJ239337 AJ308447 AY033279 AY033280 AY376105 AY866614 AY941843 AY941858 AY941885 AY941903 AY941937 AY944702 AY944720 DQ065631 DQ065643 DQ065667 DQ065682 DQ065683 DQ065690 DQ065691 DQ926090 DQ926220 DQ926223 DQ926495 DQ926527 EF178106 EU549725 EU549730 FJ385284 FJ385396 HQ378330 JF894278 JF894282 JF894286 U07988 AB063662 AB063801 AB063829 AB063919 AB066925 AB066926 AB066963 AB067152 AB067166 AB067301 AB067307 AB067308 AB067329 AB067390 AB067393 AB363083 AB363143 AB363151 AB363161 AF006523 AF021941 AF021969 AF022007 AF035786 AF062092 AF062194 AF062195 AF062197 AF115113 AF115129 AF174043 AF174084 AF174094 AF174099 AF174107 AF174114 AF174125 AF174127 AF302820 AF455545 AF455547 AJ239344 AJ239371 AJ308466 AJ389196 AJ414005 AJ414014 AJ617573 AY033238 AY055487 AY345921 AY553642 AY553645 AY577308 AY577310 AY640563 AY866611 AY941911 AY941936 AY941945 AY971057 AY971071 DQ100662 DQ100680 DQ100786 DQ100789 DQ100800 DQ100816 DQ100914 DQ100919 DQ225091 DQ926031 DQ926058 DQ926059 DQ926135 DQ926486 DQ926543 FJ385320 FJ385387 GU570212 GU570215 GU570217 GU570269 HQ689739 JF806453 JF806454 JN158766 JN158852 JN159083 JN159282 JN159291 JN159293 JN159302 JN159305 JN159446 L14456 L23558 S73506 U00499 U00505 U00539 U00554 U00562 U00568 U00586 U71104 U85231 U85241 U86522 Z18846 Z34893 Z92888 AF035803 AY686906 AY686915 AY944693 AY944713 AY944721 DQ535285 DQ535302 DQ535348 DQ535375 DQ535476 EF177970 EF178023 EF178112 EF178115 EF178119 EF178135 HM995869 HM995871 AY957509 AY957510 FJ039793 AF062143 AF062151 AF062178 AF062179 AF062226 AF062256 AF062257 AF062262 AF062267 AF062271 AF067121 AF174005 AF174006 AF174009 AF174016 AF174031 AJ009732 M29468 U43758 U43762 Z14213 Z36889 Z46348 Z47223 Z80852 L23559 M24668 AJ010445 TSC_hg19_v1_chr14_-_106453155 BC080557 M18512	-25124	-	U49664 U32269 U32952 AY312398 AY312399 DQ454445 DQ454564 DQ454725 DQ524089 DQ454727 DQ454701 AF460719 AF460723 AF460756 AF460759 AF460771 AF460834 AF460823 AF460829 AF069906 DQ454534 DQ454674 DQ454797 DQ454818 GQ232799 DQ454530 DQ454764 Z30560 DQ454570 DQ454557 DQ454637 GU552723 GQ232831 Z30574 DQ454608 DQ454707 DQ454862 DQ454866 DQ454867 DQ454932 DQ523879 GQ232818 Z30544 Z30556 Z30563 Z30597 Z30672 DQ454537 DQ454600 Z30594 DQ454991 Z30548 DQ454533 DQ454966 DQ523863 DQ454575 DQ454591 DQ454675 DQ454975 DQ454989 HM116173 AY003860 DQ454688 EF091927 JF810280 EU099245 AY393163 EU099075 EU099102 AY393165 EU099215 AM183979 AY393166 AY393171 AY393177 AY393179 AY393180 AY393181 AY393183 AY393184 S74500 EU620003 AF103363 AF400158 AJ240597 JN110684 S74642 Z46847 FJ385345 FJ385356 FJ385426 GQ504882 AY062307 AF103159 AB274406 AB274412 AY422526 HM995333 L38895 Z92893 AY671484 AY671502 HM996309 DQ524158 DQ524152 AF398957 DQ523937 DQ523942 DQ523974 DQ523976 DQ524014 DQ524020 DQ524029 DQ524039 DQ524045 DQ524146 HM996397 AM233760 AM233767 AM233773 DQ926107 AF453266 AY376082 EF177971 HM995388 HM995482 HM995628 HM995630 HM995662 HM995740 HM995924 HM996182 HM996322 HM996354 HM996496 HM996514 HM996515 AB066901 AB066907 AB067286 AB067291 AB084084 AB453233 AF174055 AF174064 AF174066 AF174090 AF174108 AF174113 AF262203 AF262207 AJ244952 AJ244989 AJ245004 AJ245022 AJ245025 AJ245048 AJ245053 AJ245233 AJ245239 AJ245242 AJ389195 AJ556756 AJ556762 AJ576037 AJ579119 AJ579123 AJ579127 AJ579128 AJ579137 AJ579254 AJ579295 AJ579298 AJ579299 AY640493 AY640507 AY640551 AY670735 AY670737 AY670748 AY670776 AY670778 AY670786 AY670793 AY670807 AY670829 AY670832 AY670848 AY670852 AY670854 AY670861 AY670868 AY670869 AY670876 AY670877 AY670880 AY670887 AY670888 AY670889 AY670891 AY670901 AY670906 AY670908 AY670909 AY670917 AY670922 AY670927 AY670934 AY670936 AY670937 AY670938 AY670939 AY670941 AY670945 AY670955 AY670956 AY670957 AY670964 AY670968 AY670971 AY670979 AY670996 AY671042 AY671084 AY671098 AY671112 AY671127 AY671131 AY671137 AY671138 AY671237 AY671320 AY671325 AY671331 AY671336 AY671344 AY671367 AY671381 AY671385 AY671396 AY671397 AY671404 AY671405 AY671407 AY671408 AY671417 AY671437 AY671440 AY671442 AY671448 AY671463 AY671465 AY671467 AY671469 AY671493 AY671501 AY671506 AY671509 AY671516 AY671522 AY671524 AY671526 AY671542 AY671546 AY671547 AY671550 AY671554 AY671558 AY671559 AY671569 AY671571 AY671584 AY671588 AY671590 AY671594 AY671604 AY671607 AY671608 AY671609 AY671610 AY671611 AY671613 AY671615 AY671616 AY671621 AY671622 AY671628 AY671633 AY671636 AY671643 AY671646 AY671647 AY671649 AY671655 AY671657 AY671662 AY671667 AY671669 AY671679 AY671680 AY671683 AY671687 AY671695 AY671747 AY671768 AY671777 AY671778 AY685295 AY685305 AY685312 AY781854 AY781863 AY971061 AY971111 AY971119 DQ005266 DQ005272 DQ005280 DQ100845 DQ100896 DQ205163 DQ926078 FJ039782 FJ385308 FJ385314 FJ385395 GU570393 GU570394 HM152486 L12191 L12196 L25294 S55101 S67077 U85239 Z18320 Z70635 Z70659 AY686879 DQ535276 DQ535307 DQ535328 EF177962 FJ195498 FJ195512 HM996178 X67910 AY392946 AY392947 AY392948 AY392956 AY671265 AY671019 AY671039 AY671041 AY671259 AY671249 AY671147 AY671154 AY671178 AY671210 AY671260 AY671261 AF013620 AF062200 AF062203 AF062207 AF062220 AF062245 AF062258 AF062264 AF062272 AF174013 AF174036 AF381602 AF381610 AM233776 AM233818 AY670746 AY671066 AY671181 AY671188 AY671211 AY671693 AY671738 M26997 M99609 X52110 Z11958 Z47221 Z75400 Z75402 BC073766 J00231 BC063384 BC011857 CU680082 CU687682 Z14196 Z14194 TSC_hg19_v1_chr14_-_106478575 Z14182	304	-	AF267814 AF267818 AY393025 M34025 DQ454568 FJ874017 FJ840306 FJ840308 FJ840341 FJ840342 FJ840347 FJ840348 FJ840351 FJ840353 FJ840354 FJ840356 FJ840361 FJ840364 FJ840365 FJ840368 FJ840373 FJ840378 FJ840401 FJ840402 FJ840404 FJ873822 FJ873825 FJ873827 FJ873829 FJ873831 FJ873832 FJ873834 FJ873841 FJ873843 FJ873845 FJ873851 FJ873852 FJ873854 FJ873856 FJ873879 FJ873880 FJ873882 FJ873889 FJ873891 FJ873893 FJ873896 FJ873900 FJ873905 FJ873906 FJ873907 FJ873908 FJ873917 FJ873919 FJ873920 FJ873927 FJ873937 FJ873944 FJ873960 FJ873973 FJ873980 FJ873983 FJ874001 FJ874004 FJ874006 FJ874007 FJ874011 FJ874012 FJ874016 FJ874021 FJ874022 FJ874032 FJ874033 FJ874035 FJ874041 FJ874060 FJ874071 FJ874092 HM116099 HM116103 HM116104 HM116108 HM116110 HM116111 HM116112 HM116124 HM116125 HM116126 HM116127 HM116132 HM116134 HM116142 HM116150 HM116151 HM116156 HM116157 HM116164 HM116171 HM116176 HM116183 HM116185 HM116186 HM116188 HM116194 HM116200 HM116203 HM116204 HM116207 HM116210 HM116211 HM116212 HM116215 HM116218 HM116224 GU552693 GQ232960 GQ232962 GQ232978 AJ008188 S75886 AJ487496 AY003819 AY994082 EU090242 EU667603 JF810259 AY393312 AY392883 AY392887 AY392891 AY392897 AY392900 AY392903 AY393023 AY393026 AY393027 AY393028 AY393029 AY393030 AY393031 AY393032 AY393033 AY393034 AY393035 AY393036 AY393037 AY393038 AY393040 AY393041 AY393042 AY393043 AY393044 AY393045 AY393046 AY393048 AY393049 AY393050 AY393051 AY393276 AY393277 AY393278 AY393283 AY393285 AY393288 AY393289 AY393290 AY393292 AY393294 AY393298 AY393299 AY393303 AY393304 AY393307 AY393310 AY393311 AY393382 AY393386 AY393390 AY393391 AY393392 AY393393 AY393406 AY393413 AY393416 AY393417 AY393418 AY393419 AY393421 AY393423 AY393435 AY393440 AY393452 AY393554 AY393555 AY393557 AY393558 AY393559 AY393564 AY393565 EU099064 EU099181 EU099246 DQ100785 JN110964 AY955064 JN110468 JN110515 JN110517 JN110539 JN110572 JN110594 JN110907 JN110984 JN110994 JN111158 JN111166 JN111205 AY062324 AM279571 AY866601 AY866658 AM279525 AM279573 AY866680 DQ100676 DQ100927 DQ100946 AM279595 AM279596 AM279599 AM279600 DQ100868 DQ926119 DQ926440 DQ926554 DQ926566 HM995527 HM995209 HM995210 HM995212 HM995214 HM995215 HM995376 HM995377 HM995380 HM995398 HM995401 HM995473 HM995528 HM995531 HM995597 HM995599 HM995814 HM995819 AB063834 AB066852 AB066861 AB066862 AB066864 AB066865 AB066866 AB066868 AB066869 AB066870 AB066871 AB066873 AB066874 AB066878 AB067185 AB067189 AB067221 AB067222 AB067223 AB067226 AB067228 AB067229 AB067231 AB067232 AB363096 AB363107 AB374193 AB374196 AB374197 AB374204 AF035018 AF062155 AF062255 AF129754 AF174046 AF174061 AF174070 AF174071 AF455551 AF460966 AY055482 AY345923 AY866550 AY866584 AY866603 AY866625 AY866961 AY941941 DQ205143 DQ490734 DQ490735 DQ490736 DQ923046 DQ926138 DQ926180 DQ926226 DQ926362 DQ926376 DQ926412 DQ926456 DQ926482 DQ926490 DQ926499 DQ926558 DQ926576 DQ926582 DQ926586 DQ926588 DQ926592 DQ926605 DQ926606 DQ926610 DQ926650 FR820874 GU570276 GU570278 GU570279 GU570280 HM152514 HQ378331 HQ378364 HQ378373 S73953 U00545 U00552 U00555 X64147 M90808 AY393141 AY393143 AY393144 AY393146 AY393147 AY393149 AY393150 X69861 AF062130 AF062268 AF062282 AY172958 S67984 X81695 Z47235 Z47237 Z47243 AK301335 TSC_hg19_v1_chr14_-_106494595 AK057617 BC092449	16333	-	AY035373 AY885209 AY885216 X61021 DQ454578 DQ523921 AF460677 AF460684 AF460701 AF460706 AF460802 DQ454428 GQ232803 GQ232912 GQ232954 GU552749 GQ232920 AY003818 AY003835 AY003844 AY003714 AY003809 DQ454647 DQ454454 DQ454471 DQ454492 DQ454915 GU552745 GU552756 GU552770 DQ454424 DQ454524 DQ454812 DQ454885 DQ454891 DQ454983 DQ454662 DQ454913 FJ840305 FJ840316 FJ873819 FJ873835 FJ873939 FJ873998 FJ874018 FJ874053 FJ874076 EU350415 AJ008237 AY003828 AJ487494 AJ487503 AY003805 DQ100698 EF175433 EF441757 EU814965 EU814969 DQ454482 EU099127 AM183996 HQ392896 AJ239383 AM279491 GQ903488 HM995750 AF103301 AF103037 AF103086 AF103146 AF165100 HM774111 AF103361 JN110905 HM775055 HM773993 FJ385329 HM774299 HM774454 HM774805 JN110797 JN111157 L04326 GQ504865 GQ504893 GQ504963 GQ504975 HM773970 HM774033 HM774184 HM774282 HM774312 HM774358 HM774362 HM774394 HM774602 HM774747 HM774807 HM774864 HM774872 HM774884 HM774902 HM774908 HM774914 HM774917 HM774979 HM774993 HM775020 HM775028 HQ703988 HQ704021 HQ704022 JN111201 DQ100741 HM775041 HM775050 S56604 AF103104 AF103221 AY866717 EF624097 EF624098 EF624099 EF624100 EF624101 EF624102 EF624103 EF624104 EF624105 EF624106 EF624107 EF624108 EF624109 EF624110 EF624111 EF624222 AJ300779 AJ300783 AJ300785 AY960861 DQ926366 AF001791 DQ100888 AF485461 AF485467 AF485475 AJ290433 AY376111 AF471523 AY423164 AY423165 AY423166 AY423167 AY423168 AY423196 AY423201 DQ100661 AJ556637 AY165857 AY885183 DQ109964 DQ109966 L37310 U00590 AF471185 AJ389182 AY866729 AY941943 DQ187554 DQ187558 DQ187672 GU570324 HM994886 HM995057 HM995131 HM995134 HM995135 HM995636 HM995660 HM995664 HM995773 HM995858 HM995860 HM996049 HM996147 HM996163 HM996317 HM996335 HM996371 HM996422 HM996433 HM996484 HM996538 U00584 DQ187677 DQ187708 DQ322751 DQ322797 DQ322802 DQ322804 DQ322860 DQ322861 DQ322862 DQ322863 DQ322864 DQ322865 DQ322866 DQ322867 DQ322894 DQ322895 DQ322896 DQ322897 DQ322905 DQ322906 DQ322909 DQ322910 DQ322922 DQ322957 DQ322958 DQ840698 DQ840723 DQ840725 DQ840754 DQ840755 DQ840757 DQ840759 DQ840761 DQ840762 DQ840763 DQ840764 DQ840765 DQ840767 DQ840768 DQ840779 DQ840854 DQ840860 DQ840862 DQ840867 DQ840872 DQ840875 DQ926106 HM996194 AF098360 AF115120 AF151699 AF151701 AF471405 AF471406 AF471470 AJ488539 AJ606116 AJ606117 AY530318 AY686908 DQ100752 DQ100787 DQ100790 DQ100827 DQ100850 DQ926039 DQ926040 DQ926061 DQ926074 DQ926108 DQ926127 DQ926145 DQ926175 DQ926381 DQ926443 DQ926559 DQ926611 EF177960 EF178018 EF178108 EU794412 FJ195533 FJ385315 HQ378333 HQ378408 L19913 X87893 X95740 Z18836 AB021510 AB021520 AB063665 AB063803 AB063812 AB063892 AB066987 AB067027 AB067099 AB067112 AB067123 AB067237 AB067268 AF021995 AF022001 AF052526 AF062119 AF062188 AF062241 AF109406 AF174118 AF408728 AF471169 AF471171 AF471172 AF471177 AF471179 AF471180 AF471181 AF471182 AF471184 AF471186 AF471189 AF471194 AF471195 AF471198 AF471199 AF471203 AF471204 AF471205 AF471208 AF471212 AF471214 AF471220 AF471386 AF471522 AF471527 AF471533 AF471543 AJ238036 AJ238038 AJ238040 AJ239359 AJ245208 AJ245317 AJ271601 AJ300781 AJ300786 AJ300796 AJ414013 AJ488543 AJ491910 AJ555273 AJ556638 AJ556640 AJ556645 AJ556649 AJ556658 AJ556659 AJ556660 AJ556664 AJ556667 AJ556668 AJ556669 AJ574777 AJ574779 AJ579141 AJ579162 AJ579198 AJ579216 AJ579217 AJ579233 AJ579234 AJ579239 AJ579269 AJ627231 AJ627236 AJ627237 AY033247 AY033256 AY033273 AY148344 AY281326 AY640478 AY685255 AY685317 AY955072 AY971017 AY971018 AY971074 AY971101 AY971123 DQ021409 DQ065716 DQ065724 DQ535273 DQ535337 DQ535344 DQ535374 DQ535415 DQ535435 DQ535457 DQ535480 DQ926153 DQ926159 DQ926221 DQ926410 DQ926544 DQ926553 DQ926573 DQ926614 EF177979 EF178025 EF178029 EF178039 EF178120 EF178121 EF178134 EF633799 EF633800 EU549723 EU794426 FJ385367 FJ481089 FJ492901 GQ856061 GQ903508 GQ903515 HM152524 HQ689704 JF806286 JF806288 JF806292 L39958 U00487 U00538 U03400 U76679 U85242 U85243 U96279 U96282 U96284 X62965 X99356 X99361 Z18822 Z95482 Z96960 Z96961 Z96962 Z96971 HM995657 AF283801 AJ249633 HM995748 HM995753 HM995770 HM995771 HM995772 HM995775 HM995873 Z14175 X69864 AY392917 AY393072 AY393151 AY393154 AY393160 X69863 X67908 Z14189 AF062138 AF062243 AF174030 AF174034 U79585 X59134 X65896 CU676308 BC041037 BC018747 BC062335 BC064496 TSC_hg19_v1_chr14_-_106518933 AK130614 AK097345 AK123975 AK126132 AK225676 BX640822	40630	-	BC075840|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640724|IGHM|3507|immunoglobulin heavy constant mu##AK097348|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK126543|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640847|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129517|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC080557|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073766|IGHV4-31|28396|immunoglobulin heavy variable 4-31##J00231|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC063384|IGHD|3495|immunoglobulin heavy constant delta##BC011857|IGHM|3507|immunoglobulin heavy constant mu##AK301335|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC092449|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC041037|IGHM|3507|immunoglobulin heavy constant mu##BC018747|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC062335|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC064496|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097345|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK123975|IGH@|3492|immunoglobulin heavy locus##BX640822|IGH@|3492|immunoglobulin heavy locus	0.992088	CTCF.p2:-30:0.992
chr15	102192526	102192707	reg1034232.p1	4.127	+	TSC_hg19_v1_chr15_-_102192580 BC006150 BC008873 AF353992 AK315584 AK297048 AK026257 AK296553 NM_025141 NM_078474	-150	-	TSC_hg19_v1_chr15_-_102030140 NM_002570 NM_138319 NM_138320 NM_138321 NM_138322 NM_138323 NM_138324 NM_138325	-162454	-	TSC_hg19_v1_chr15_-_102029995 M80482 M80482	-162583	-	TSC_hg19_v1_chr15_-_102264638 BC132671 BC136315 BC143943 AK056653 AX721055 NM_152334	72039	-	BC137002 BC137003 NM_001005326	153295	+	BC137064 BC137065 NM_001001674	165761	+	BC006150|TM2D3|80213|TM2 domain containing 3##BC008873|TM2D3|80213|TM2 domain containing 3##AF353992|TM2D3|80213|TM2 domain containing 3##AK315584|TM2D3|80213|TM2 domain containing 3##AK297048|TM2D3|80213|TM2 domain containing 3##AK026257|TM2D3|80213|TM2 domain containing 3##AK296553|TM2D3|80213|TM2 domain containing 3##NM_025141|TM2D3|80213|TM2 domain containing 3##NM_078474|TM2D3|80213|TM2 domain containing 3##NM_002570|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138319|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138320|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138321|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138322|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138323|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138324|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138325|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##BC132671|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC136315|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC143943|TARSL2|123283|threonyl-tRNA synthetase-like 2##AK056653|TARSL2|123283|threonyl-tRNA synthetase-like 2##NM_152334|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137064|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##BC137065|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15##NM_001001674|OR4F15|390649|olfactory receptor, family 4, subfamily F, member 15	0.028922	
chr15	61197932	61198042	reg1036001.p2	4.127	+	U04899 U04898 NM_002943 NM_134260	-278302	-	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	-313308	-	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-426713	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	323437	-	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	323510	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	1154627	-	U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)	0.553835	CTCF.p2:1:0.554
chr16	85969582	85969762	reg1029649.p2	4.127	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-36886	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-136337	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-136367	+	TSC_hg19_v1_chr16_-_86542463 AK091834	572792	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	574484	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	574568	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.0	
chr5	160103154	160103252	reg1031387.p1	4.127	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-254300	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-254349	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-257098	-	AK025130 TSC_hg19_v1_chr5_-_160112393	9136	-	AB018258 AK295081 AK090832 AX746642 NM_025153	175928	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	871923	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.053467	
chr11	46414200	46414318	reg1035000.p1	4.126	+	BC119775 BC119817 AF385590 AF498918 NM_000741 BC095546 BC137535	-6128	-	NM_001012333 TSC_hg19_v1_chr11_+_46403310	-10953	+	TSC_hg19_v1_chr11_+_46403285 X55110	-10972	+	BC045609 NM_017749 AK302808	198683	-	AL834190 TSC_hg19_v1_chr11_-_46615568 AK057896 AK000301 AB051523	201276	-	AK304530 TSC_hg19_v1_chr11_-_46615589	201344	-	BC119775|CHRM4|1132|cholinergic receptor, muscarinic 4##BC119817|CHRM4|1132|cholinergic receptor, muscarinic 4##AF385590|CHRM4|1132|cholinergic receptor, muscarinic 4##AF498918|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_000741|CHRM4|1132|cholinergic receptor, muscarinic 4##BC095546|CHRM4|1132|cholinergic receptor, muscarinic 4##BC137535|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_001012333|MDK|4192|midkine (neurite growth-promoting factor 2)##X55110|MDK|4192|midkine (neurite growth-promoting factor 2)##BC045609|AMBRA1|55626|autophagy/beclin-1 regulator 1##NM_017749|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK302808|AMBRA1|55626|autophagy/beclin-1 regulator 1##AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1##AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1	0.0	
chr13	39440981	39441113	reg1029510.p2	4.126	+	NM_207361	-179875	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	-516998	+	NM_016617 TSC_hg19_v1_chr13_+_38923946	-517096	+	DQ891676 EU176604 AK313632 BC025760 AK304159 NM_001144033 NM_145286	123879	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	171154	-	TSC_hg19_v1_chr13_-_39612251 NM_025138 NM_170719	171206	-	NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2##AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##DQ891676|STOML3|161003|stomatin (EPB72)-like 3##EU176604|STOML3|161003|stomatin (EPB72)-like 3##AK313632|STOML3|161003|stomatin (EPB72)-like 3##BC025760|STOML3|161003|stomatin (EPB72)-like 3##AK304159|STOML3|161003|stomatin (EPB72)-like 3##NM_001144033|STOML3|161003|stomatin (EPB72)-like 3##NM_145286|STOML3|161003|stomatin (EPB72)-like 3##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1##NM_025138|PROSER1|80209|proline and serine rich 1##NM_170719|PROSER1|80209|proline and serine rich 1	0.239696	CTCF.p2:22:0.240
chr20	8732249	8732359	reg1035515.p1	4.126	+	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	-619274	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-731832	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-731897	-	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	317379	+	AK307482 TSC_hg19_v1_chr20_+_9049806	317494	+	NM_182797 BC117458 BC143868	465754	+	AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4	1.197231	CTCF.p2:-5:0.999
chr4	185240802	185240983	reg1027132.p2	4.126	+	BC035035 AY358676 AK057370 NM_153343	-101827	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-412981	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-413072	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	154789	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	329709	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	329941	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr12	126073891	126073957	reg1033594.p2	4.125	+	NM_052907	-262763	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-523856	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-523983	+	NM_001136103	2678023	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	3234519	-	BC043528 TSC_hg19_v1_chr12_+_129337985	3264060	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.0	
chr14	31221326	31221474	reg1031763.p1	4.125	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	-129856	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	-129876	+	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	-193040	+	TSC_hg19_v1_chr14_+_31343764 NM_001135058 NM_004086 AY358900 AF006740 AK292724 BC000640 BC007230 BC018827	122318	+	NM_001128126 NM_007077	273282	+	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	274170	-	AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##NM_001135058|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_004086|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AY358900|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AF006740|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AK292724|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC000640|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC007230|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC018827|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_001128126|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##NM_007077|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3	0.038724	
chr22	49442467	49442583	reg1033821.p1	4.125	+	AK125256 NM_015381 AK123443 AY358847	-470364	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	-557245	+	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	-1415022	+	AK124962 TSC_hg19_v1_chr22_-_50051168 BC033837 BC048207	608608	-	AF005067 NM_014577	775926	-	AK292428 TSC_hg19_v1_chr22_-_50221332 BC030007 BC047508	778741	-	AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK093107|LOC284930|284930|uncharacterized LOC284930##AK124962|C22orf34|348645|chromosome 22 open reading frame 34##BC048207|C22orf34|348645|chromosome 22 open reading frame 34##AF005067|BRD1|23774|bromodomain containing 1##NM_014577|BRD1|23774|bromodomain containing 1##AK292428|BRD1|23774|bromodomain containing 1##BC030007|BRD1|23774|bromodomain containing 1##BC047508|BRD1|23774|bromodomain containing 1	1.002666	CTCF.p2:6:0.992
chr2	68715016	68715157	reg1033685.p1	4.125	+	TSC_hg19_v1_chr2_+_68694716 AK290841 NM_173545 AK308186 BC041144 CU691972	-20322	+	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	-20676	-	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	-122629	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	157867	+	NM_001007231 NM_001166277 AK297056 TSC_hg19_v1_chr2_+_68962066 AK310742 AK290396	246987	+	BC032222 NM_001166276 NM_014882 AK311669 TSC_hg19_v1_chr2_+_69002068 BC039591 AK297157 AK298669 D29642	286939	+	AK290841|APLF|200558|aprataxin and PNKP like factor##NM_173545|APLF|200558|aprataxin and PNKP like factor##AK308186|APLF|200558|aprataxin and PNKP like factor##BC041144|APLF|200558|aprataxin and PNKP like factor##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48##DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin##AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1##NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25##AK297056|ARHGAP25|9938|Rho GTPase activating protein 25##AK310742|ARHGAP25|9938|Rho GTPase activating protein 25##AK290396|ARHGAP25|9938|Rho GTPase activating protein 25##BC032222|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166276|ARHGAP25|9938|Rho GTPase activating protein 25##NM_014882|ARHGAP25|9938|Rho GTPase activating protein 25##AK311669|ARHGAP25|9938|Rho GTPase activating protein 25##BC039591|ARHGAP25|9938|Rho GTPase activating protein 25##AK297157|ARHGAP25|9938|Rho GTPase activating protein 25##AK298669|ARHGAP25|9938|Rho GTPase activating protein 25##D29642|ARHGAP25|9938|Rho GTPase activating protein 25	0.542294	CTCF.p2:3:0.542
chr3	2576521	2576675	reg1037929.p1	4.125	+	AK095729 TSC_hg19_v1_chr3_+_2553286	-23318	+	NM_001206955	-296086	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	-436037	+	NM_001206956 NM_175613 AK057278 AK314396 BC026119	357311	+	AK304256 NM_000564 NM_001243099 NM_175724 NM_175725 NM_175726 NM_175727 NM_175728	575459	-	NM_182916 TSC_hg19_v1_chr3_+_3168634 AK290411 BC005184 AL834397 BC012537 AB063105 AF151805 AK124137	592053	+	AK095729|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4##AK304256|IL5RA|3568|interleukin 5 receptor, alpha##NM_000564|IL5RA|3568|interleukin 5 receptor, alpha##NM_001243099|IL5RA|3568|interleukin 5 receptor, alpha##NM_175724|IL5RA|3568|interleukin 5 receptor, alpha##NM_175725|IL5RA|3568|interleukin 5 receptor, alpha##NM_175726|IL5RA|3568|interleukin 5 receptor, alpha##NM_175727|IL5RA|3568|interleukin 5 receptor, alpha##NM_175728|IL5RA|3568|interleukin 5 receptor, alpha##NM_182916|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AK290411|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC005184|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AL834397|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC012537|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AB063105|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AF151805|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1	0.0	
chr5	1653868	1654049	reg1003747.p1	4.125	+	TSC_hg19_v1_chr5_-_1634100 BC019918 BC045555 AK311210 AK311251	-19840	-	TSC_hg19_v1_chr5_-_1634097 BC020552 BC053586 BC044220 AK308990 AK315872 BC067863 BC014604 AK307076	-19889	-	TSC_hg19_v1_chr5_-_1594617 BC150558	-59327	-	TSC_hg19_v1_chr5_-_1799926 AB049654 AF151109 AF155653 BC020642	145965	-	TSC_hg19_v1_chr5_-_1799952 AK312001 BC104652 EF036487 NM_032479	146014	-	TSC_hg19_v1_chr5_+_1801520 NM_004553 AK022503 BC038664 AF044959 BC046155 CR456880 HQ257915	147554	+	BC019918|LOC728613|728613|programmed cell death 6 pseudogene##BC045555|LOC728613|728613|programmed cell death 6 pseudogene##AK311210|LOC728613|728613|programmed cell death 6 pseudogene##BC020552|LOC728613|728613|programmed cell death 6 pseudogene##BC053586|LOC728613|728613|programmed cell death 6 pseudogene##BC044220|LOC728613|728613|programmed cell death 6 pseudogene##AK308990|LOC728613|728613|programmed cell death 6 pseudogene##BC067863|LOC728613|728613|programmed cell death 6 pseudogene##BC014604|LOC728613|728613|programmed cell death 6 pseudogene##AK307076|LOC728613|728613|programmed cell death 6 pseudogene##BC150558|SDHAP3|728609|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3##AB049654|MRPL36|64979|mitochondrial ribosomal protein L36##AF151109|MRPL36|64979|mitochondrial ribosomal protein L36##AF155653|MRPL36|64979|mitochondrial ribosomal protein L36##BC020642|MRPL36|64979|mitochondrial ribosomal protein L36##AK312001|MRPL36|64979|mitochondrial ribosomal protein L36##BC104652|MRPL36|64979|mitochondrial ribosomal protein L36##EF036487|MRPL36|64979|mitochondrial ribosomal protein L36##NM_032479|MRPL36|64979|mitochondrial ribosomal protein L36##NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)	0.0	
chr10	29776893	29776997	reg1029660.p2	4.124	+	BX648589 TSC_hg19_v1_chr10_-_29754623	-22394	-	BC031656 TSC_hg19_v1_chr10_+_29698527 BC063483 AL832706	-78428	+	TSC_hg19_v1_chr10_+_29698496 BC073888	-78447	+	TSC_hg19_v1_chr10_-_29923841 BC057241 BC070247	146916	-	AF109135 NM_021738 TSC_hg19_v1_chr10_-_29923901	146962	-	TSC_hg19_v1_chr10_-_30024866 AF051850 NM_003174	247819	-	BX648589|SVIL|6840|supervillin##BC031656|LOC387647|387647|patched domain containing 3 pseudogene##BC063483|LOC387647|387647|patched domain containing 3 pseudogene##AL832706|LOC387647|387647|patched domain containing 3 pseudogene##BC073888|LOC387647|387647|patched domain containing 3 pseudogene##AF109135|SVIL|6840|supervillin##NM_021738|SVIL|6840|supervillin##AF051850|SVIL|6840|supervillin##NM_003174|SVIL|6840|supervillin	0.99467	CTCF.p2:4:0.995
chr14	40050822	40050971	reg1032975.p1	4.124	+	BC053537 BC068566 BC030611 NM_203301	-149235	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-149539	-	TSC_hg19_v1_chr14_+_39736592 BC039017 AK315254 BC029513 BC051363 U73682	-314323	+	NM_152447 AK096627	2025871	+	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	4925579	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	5315602	+	BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##BC039017|CTAGE5|4253|CTAGE family, member 5##AK315254|CTAGE5|4253|CTAGE family, member 5##BC029513|CTAGE5|4253|CTAGE family, member 5##BC051363|CTAGE5|4253|CTAGE family, member 5##U73682|CTAGE5|4253|CTAGE family, member 5##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28	0.664436	CTCF.p2:2:0.664
chr14	71373853	71373950	reg1014617.p1	4.124	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-98092	-	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	-265292	+	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	-306524	-	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	232	+	TSC_hg19_v1_chr14_+_71374441 BC140784	550	+	AF090989 AF090990 NM_015556	622140	+	AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9##AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	0.0	
chr15	65117983	65118090	reg1034082.p2	4.124	+	BC137503 BC137504 TSC_hg19_v1_chr15_-_65117814 BC018978 AK026345 EU084033 NM_025049 AB185926 AB185927	-201	-	BC131612 BC148208 AY369207 NM_194272 TSC_hg19_v1_chr15_-_65067789 AK127873	-50290	-	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	-122567	-	AK311036 NM_001195059 NM_025201 TSC_hg19_v1_chr15_+_65134113 AK096203 BC008744 AF494534	16071	+	TSC_hg19_v1_chr15_+_65204100 AK098736 NM_182703 AK075298 BC110610 AK307698	86053	+	TSC_hg19_v1_chr15_-_65281780 AF212231 NM_001127889	163773	-	BC137503|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC137504|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC018978|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AK026345|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##EU084033|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_025049|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185926|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185927|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC131612|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC148208|RBPMS2|348093|RNA binding protein with multiple splicing 2##AY369207|RBPMS2|348093|RNA binding protein with multiple splicing 2##NM_194272|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK127873|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_001195059|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##NM_025201|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK096203|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC008744|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AF494534|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK098736|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##NM_182703|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK075298|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##BC110610|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK307698|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	0.016023	
chr2	217007374	217007533	reg1032235.p1	4.124	+	TSC_hg19_v1_chr2_+_216986829 AK026166	-20586	+	TSC_hg19_v1_chr2_+_216974124 J04977 M30938 AK290740 BC095442 BC019027 AB489155 CU676354 DQ892660 DQ895925	-33314	+	TSC_hg19_v1_chr2_+_216974112 AK222603	-33344	+	TSC_hg19_v1_chr2_-_217236666 AB037820 NM_020814	229254	-	NM_014140 TSC_hg19_v1_chr2_+_217277188 AK023780	269745	+	TSC_hg19_v1_chr2_+_217277487 NM_001127207 AF432223 BC043341	270025	+	AK026166|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##J04977|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##M30938|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK290740|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC095442|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##BC019027|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ892660|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##DQ895925|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AK222603|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)##AB037820|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_020814|MARCH4|57574|membrane-associated ring finger (C3HC4) 4##NM_014140|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AK023780|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##NM_001127207|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##AF432223|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1##BC043341|SMARCAL1|50485|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1	0.0	
chr3	147556574	147556709	reg1033458.p1	4.124	+	BC104848 BC104850 TSC_hg19_v1_chr3_+_147127864 AB464362	-428779	+	TSC_hg19_v1_chr3_+_147127156 NM_003412	-429470	+	NM_001243256 NM_032153	-432046	-	NM_000685 NM_004835 NM_009585 NM_031850 TSC_hg19_v1_chr3_+_148415688 AK291541 BC068494 BC022447 M87290 S77410 X65699	859046	+	NM_032049	891325	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	988957	+	BC104848|ZIC1|7545|Zic family member 1##BC104850|ZIC1|7545|Zic family member 1##NM_003412|ZIC1|7545|Zic family member 1##NM_001243256|ZIC4|84107|Zic family member 4##NM_032153|ZIC4|84107|Zic family member 4##NM_000685|AGTR1|185|angiotensin II receptor, type 1##NM_004835|AGTR1|185|angiotensin II receptor, type 1##NM_009585|AGTR1|185|angiotensin II receptor, type 1##NM_031850|AGTR1|185|angiotensin II receptor, type 1##AK291541|AGTR1|185|angiotensin II receptor, type 1##BC068494|AGTR1|185|angiotensin II receptor, type 1##BC022447|AGTR1|185|angiotensin II receptor, type 1##M87290|AGTR1|185|angiotensin II receptor, type 1##S77410|AGTR1|185|angiotensin II receptor, type 1##X65699|AGTR1|185|angiotensin II receptor, type 1##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)	0.744888	CTCF.p2:22:0.745
chr3	152760778	152760877	reg1000987.p1	4.124	+	NM_002563 Z49205	-208092	+	AY358260 NM_001123228	-702049	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-743634	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	119199	+	TSC_hg19_v1_chr3_+_152880058 BC012362	119221	+	AF086445 NM_001101337	441456	+	NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79	0.0	
chr3	98331380	98331495	reg1015112.p1	4.124	+	AK223481 BC023554 BC017210 BC023551 TSC_hg19_v1_chr3_-_98312446 AK299692 AK290140 NM_000097	-19018	-	AK313375 BC101779 BC101781 BC069437 CU686810 NM_005290	-80628	+	TSC_hg19_v1_chr3_-_98241835 NM_001040181 NM_001040182 NM_001040183 NM_001040199 NM_001040200 NM_019895	-89571	-	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	119808	+	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	120150	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	289055	-	AK223481|CPOX|1371|coproporphyrinogen oxidase##BC023554|CPOX|1371|coproporphyrinogen oxidase##BC017210|CPOX|1371|coproporphyrinogen oxidase##BC023551|CPOX|1371|coproporphyrinogen oxidase##AK299692|CPOX|1371|coproporphyrinogen oxidase##AK290140|CPOX|1371|coproporphyrinogen oxidase##NM_000097|CPOX|1371|coproporphyrinogen oxidase##AK313375|GPR15|2838|G protein-coupled receptor 15##BC101779|GPR15|2838|G protein-coupled receptor 15##BC101781|GPR15|2838|G protein-coupled receptor 15##BC069437|GPR15|2838|G protein-coupled receptor 15##NM_005290|GPR15|2838|G protein-coupled receptor 15##NM_001040181|CLDND1|56650|claudin domain containing 1##NM_001040182|CLDND1|56650|claudin domain containing 1##NM_001040183|CLDND1|56650|claudin domain containing 1##NM_001040199|CLDND1|56650|claudin domain containing 1##NM_001040200|CLDND1|56650|claudin domain containing 1##NM_019895|CLDND1|56650|claudin domain containing 1##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2	0.037935	
chr4	139313968	139314149	reg1032624.p1	4.124	+	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	-150694	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-860416	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-860466	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	622935	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	691345	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	691553	-	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.0	
chr7	7984721	7984901	reg1031126.p2	4.124	+	BC009868 NM_002947	-226574	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-304438	+	BT007320 AB464142 TSC_hg19_v1_chr7_-_7680067 L07493 BC005264 AK311842	-304724	-	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	23622	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	316905	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	316980	-	BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##BT007320|RPA3|6119|replication protein A3, 14kDa##L07493|RPA3|6119|replication protein A3, 14kDa##BC005264|RPA3|6119|replication protein A3, 14kDa##AK311842|RPA3|6119|replication protein A3, 14kDa##NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr9	132249493	132249657	reg1029284.p1	4.124	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-166280	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-309035	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-309068	-	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	1779	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	1866	+	BC112353 AK093122 AX747938 NM_199350	133462	-	AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50	0.142569	
chrX	56827400	56827515	reg1041182.p1	4.124	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-71766	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-237406	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-568547	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	194514	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	320471	-	BC071694 NM_019003	336600	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.265093	CTCF.p2:14:0.265
chr10	26726795	26726890	reg1022863.p1	4.123	+	M74826 BC029517 M81882 TSC_hg19_v1_chr10_+_26505702 BC126327 BC126329 AB527954 HQ258311	-221177	+	NM_000818 NM_001134366	-221607	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	-503662	+	TSC_hg19_v1_chr10_+_26727269 NM_019043	429	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	475	+	TSC_hg19_v1_chr10_+_26727679 BC054516	826	+	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##HQ258311|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA##NM_019043|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	0.056683	
chr12	57113078	57113149	reg1031182.p2	4.123	+	TSC_hg19_v1_chr12_-_57082069 AK298147 NM_006601 AK293139	-31006	-	TSC_hg19_v1_chr12_-_57082040 AK298160 L24804 Z69891	-31112	-	TSC_hg19_v1_chr12_-_57081947 AK291945 AK295208	-31173	-	TSC_hg19_v1_chr12_-_57118269 AB463919 CR450295 AY034001	5171	-	BC105120 BC105122 TSC_hg19_v1_chr12_-_57119084 BC106041 AF054187 AY605660 AY911673 X80909 AK311904 AK096699 AK223085 AK293209	5929	-	TSC_hg19_v1_chr12_-_57119316 NM_001113202 NM_001113203	6205	-	AK298147|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##NM_006601|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##AK293139|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##AK298160|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##L24804|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##Z69891|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##AK291945|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##AK295208|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##CR450295|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY034001|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC105120|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC105122|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC106041|NACA|4666|nascent polypeptide-associated complex alpha subunit##AF054187|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY605660|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY911673|NACA|4666|nascent polypeptide-associated complex alpha subunit##X80909|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK311904|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK096699|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK223085|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK293209|NACA|4666|nascent polypeptide-associated complex alpha subunit##NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit##NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit	0.05523	
chr1	2574667	2574800	reg1034958.p2	4.123	+	AK093058 AX747891 NM_033467 TSC_hg19_v1_chr1_-_2564497	-10268	-	TSC_hg19_v1_chr1_+_2518534 AK094901	-56219	+	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	-56545	+	NM_001242672	131496	-	NM_080431 AK058153 AK314500 BC029499	363322	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	411043	+	AK093058|MMEL1|79258|membrane metallo-endopeptidase-like 1##NM_033467|MMEL1|79258|membrane metallo-endopeptidase-like 1##AK094901|FAM213B|127281|family with sequence similarity 213, member B##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B##NM_001242672|TTC34|100287898|tetratricopeptide repeat domain 34##NM_080431|ACTRT2|140625|actin-related protein T2##AK058153|ACTRT2|140625|actin-related protein T2##AK314500|ACTRT2|140625|actin-related protein T2##BC029499|ACTRT2|140625|actin-related protein T2##NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16	0.515445	CTCF.p2:-81:0.515
chr19	2260465	2260560	reg1033889.p1	4.123	+	AK056978 NM_144616	-4094	-	NM_000479	-11400	+	NM_007165 TSC_hg19_v1_chr19_+_2236834 AK314815 BC009903 BC041763 BC004434 BC015804	-23674	+	TSC_hg19_v1_chr19_+_2269523 AK307221 NM_004152 AK309122	9008	+	TSC_hg19_v1_chr19_+_2269526 BC042364	9014	+	TSC_hg19_v1_chr19_+_2269534 BC100291 BC013037 BC010063 BC081537 BC007247 BC053360 D87914 BC055397 U09202 BC093652 BC112133	9030	+	AK056978|JSRP1|126306|junctional sarcoplasmic reticulum protein 1##NM_144616|JSRP1|126306|junctional sarcoplasmic reticulum protein 1##NM_000479|AMH|268|anti-Mullerian hormone##NM_007165|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##AK314815|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##BC009903|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##BC004434|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##BC015804|SF3A2|8175|splicing factor 3a, subunit 2, 66kDa##AK307221|OAZ1|4946|ornithine decarboxylase antizyme 1##NM_004152|OAZ1|4946|ornithine decarboxylase antizyme 1##AK309122|SPPL2B|56928|signal peptide peptidase-like 2B##BC042364|OAZ1|4946|ornithine decarboxylase antizyme 1##BC100291|OAZ1|4946|ornithine decarboxylase antizyme 1##BC013037|OAZ1|4946|ornithine decarboxylase antizyme 1##BC010063|OAZ1|4946|ornithine decarboxylase antizyme 1##BC081537|OAZ1|4946|ornithine decarboxylase antizyme 1##BC007247|OAZ1|4946|ornithine decarboxylase antizyme 1##BC053360|OAZ1|4946|ornithine decarboxylase antizyme 1##D87914|OAZ1|4946|ornithine decarboxylase antizyme 1##BC055397|OAZ1|4946|ornithine decarboxylase antizyme 1##U09202|OAZ1|4946|ornithine decarboxylase antizyme 1##BC093652|OAZ1|4946|ornithine decarboxylase antizyme 1##BC112133|OAZ1|4946|ornithine decarboxylase antizyme 1	0.0	
chr3	75718378	75718496	reg1034473.p2	4.123	+	AK000525 NM_001124759	-4954	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	-234288	-	AB384611 BC150608 NM_020872	-1148135	-	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	3049	+	NM_001128223	115817	-	TSC_hg19_v1_chr3_-_75834698 AK123776	116265	-	AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##NM_001128223|ZNF717|100131827|zinc finger protein 717##AK123776|ZNF717|100131827|zinc finger protein 717	0.0	
chr7	142699445	142699568	reg1016758.p2	4.123	+	M64934 TSC_hg19_v1_chr7_-_142659447 DQ896776 EU176416 BC003135 NM_000420	-40049	-	BC050639 TSC_hg19_v1_chr7_-_142659405 AK314831	-40105	-	BC014596 NM_178829 AB083483 AB083484 AB464498	-62847	+	NM_001001658 BC137048 BC137049	24743	-	BC137044 NM_001001667	49920	+	BC010950 AK312227 BC010951 NM_002652 Y10179 J03460	129670	+	M64934|KEL|3792|Kell blood group, metallo-endopeptidase##DQ896776|KEL|3792|Kell blood group, metallo-endopeptidase##EU176416|KEL|3792|Kell blood group, metallo-endopeptidase##BC003135|KEL|3792|Kell blood group, metallo-endopeptidase##NM_000420|KEL|3792|Kell blood group, metallo-endopeptidase##BC050639|KEL|3792|Kell blood group, metallo-endopeptidase##AK314831|KEL|3792|Kell blood group, metallo-endopeptidase##BC014596|C7orf34|135927|chromosome 7 open reading frame 34##NM_178829|C7orf34|135927|chromosome 7 open reading frame 34##AB083483|C7orf34|135927|chromosome 7 open reading frame 34##AB083484|C7orf34|135927|chromosome 7 open reading frame 34##NM_001001658|OR9A2|135924|olfactory receptor, family 9, subfamily A, member 2##BC137048|OR9A2|135924|olfactory receptor, family 9, subfamily A, member 2##BC137049|OR9A2|135924|olfactory receptor, family 9, subfamily A, member 2##BC137044|OR6V1|346517|olfactory receptor, family 6, subfamily V, member 1##NM_001001667|OR6V1|346517|olfactory receptor, family 6, subfamily V, member 1##BC010950|PIP|5304|prolactin-induced protein##AK312227|PIP|5304|prolactin-induced protein##BC010951|PIP|5304|prolactin-induced protein##NM_002652|PIP|5304|prolactin-induced protein##Y10179|PIP|5304|prolactin-induced protein##J03460|PIP|5304|prolactin-induced protein	0.48076	
chr10	1082284	1082433	reg1034341.p1	4.122	+	BC017778 AK056950 NM_033261	-10561	-	TSC_hg19_v1_chr10_+_1034373 BC008683 BC021243 AF120334 BC038975 AK001548 AK097093 AK222861 AK295231 AF325353 BC033784 AK302219	-47960	+	TSC_hg19_v1_chr10_+_1034348 AK001552 NM_012341	-48017	+	TSC_hg19_v1_chr10_-_1094827 X17025 AK222875 BC107893	12475	-	AK311110 TSC_hg19_v1_chr10_-_1094867	12512	-	BC050720 TSC_hg19_v1_chr10_+_1095034 BC018045 BC046483	12657	+	BC017778|IDI2|91734|isopentenyl-diphosphate delta isomerase 2##AK056950|IDI2|91734|isopentenyl-diphosphate delta isomerase 2##NM_033261|IDI2|91734|isopentenyl-diphosphate delta isomerase 2##BC008683|GTPBP4|23560|GTP binding protein 4##BC021243|GTPBP4|23560|GTP binding protein 4##AF120334|GTPBP4|23560|GTP binding protein 4##BC038975|GTPBP4|23560|GTP binding protein 4##AK001548|GTPBP4|23560|GTP binding protein 4##AK097093|GTPBP4|23560|GTP binding protein 4##AK222861|GTPBP4|23560|GTP binding protein 4##AK295231|GTPBP4|23560|GTP binding protein 4##AF325353|GTPBP4|23560|GTP binding protein 4##BC033784|GTPBP4|23560|GTP binding protein 4##AK302219|GTPBP4|23560|GTP binding protein 4##AK001552|GTPBP4|23560|GTP binding protein 4##NM_012341|GTPBP4|23560|GTP binding protein 4##X17025|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AK222875|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##BC107893|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AK311110|IDI1|3422|isopentenyl-diphosphate delta isomerase 1	0.0	
chr10	51564991	51565171	reg1027993.p1	4.122	+	AK312108 BC005257 NM_002443 NM_138634 S67815 M15885 U22178 U78976	-15519	+	NM_001077685	-78755	-	DQ867088 BC033633 BC012005 BC052966 BC050560 AK293897 AK308656 AK311609 AK301845 BC051717 AK307788 AY575848 AK293735 AY258587 AY575849 EF382674 NM_003631 AK295786 AK294819 AK295244 AK302560	-193835	-	NM_001145260 NM_001145261 NM_001145263 TSC_hg19_v1_chr10_+_51565152 AK312325	58	+	TSC_hg19_v1_chr10_+_51565201 AK293978 AK304123 AK310849	122	+	TSC_hg19_v1_chr10_+_51565230 BC001562 AK129911 AK302794 S71225 X77548	152	+	AK312108|MSMB|4477|microseminoprotein, beta-##BC005257|MSMB|4477|microseminoprotein, beta-##NM_002443|MSMB|4477|microseminoprotein, beta-##NM_138634|MSMB|4477|microseminoprotein, beta-##S67815|MSMB|4477|microseminoprotein, beta-##M15885|MSMB|4477|microseminoprotein, beta-##U22178|MSMB|4477|microseminoprotein, beta-##U78976|MSMB|4477|microseminoprotein, beta-##NM_001077685|AGAP7|653268|ArfGAP with GTPase domain, ankyrin repeat and PH domain 7##DQ867088|PARG|8505|poly (ADP-ribose) glycohydrolase##BC012005|PARG|8505|poly (ADP-ribose) glycohydrolase##BC052966|PARG|8505|poly (ADP-ribose) glycohydrolase##BC050560|PARG|8505|poly (ADP-ribose) glycohydrolase##AK293897|LOC728407|728407|poly (ADP-ribose) glycohydrolase pseudogene##AK311609|LOC728407|728407|poly (ADP-ribose) glycohydrolase pseudogene##AK301845|PARG|8505|poly (ADP-ribose) glycohydrolase##BC051717|AGAP8|728404|ArfGAP with GTPase domain, ankyrin repeat and PH domain 8##AY575848|PARG|8505|poly (ADP-ribose) glycohydrolase##AY258587|PARG|8505|poly (ADP-ribose) glycohydrolase##AY575849|PARG|8505|poly (ADP-ribose) glycohydrolase##EF382674|PARG|8505|poly (ADP-ribose) glycohydrolase##NM_003631|PARG|8505|poly (ADP-ribose) glycohydrolase##AK295786|PARG|8505|poly (ADP-ribose) glycohydrolase##AK294819|LOC728407|728407|poly (ADP-ribose) glycohydrolase pseudogene##AK295244|PARG|8505|poly (ADP-ribose) glycohydrolase##AK302560|PARG|8505|poly (ADP-ribose) glycohydrolase##NM_001145260|NCOA4|8031|nuclear receptor coactivator 4##NM_001145261|NCOA4|8031|nuclear receptor coactivator 4##NM_001145263|NCOA4|8031|nuclear receptor coactivator 4##AK312325|NCOA4|8031|nuclear receptor coactivator 4##AK293978|NCOA4|8031|nuclear receptor coactivator 4##AK304123|NCOA4|8031|nuclear receptor coactivator 4##AK310849|NCOA4|8031|nuclear receptor coactivator 4##BC001562|NCOA4|8031|nuclear receptor coactivator 4##AK129911|NCOA4|8031|nuclear receptor coactivator 4##AK302794|NCOA4|8031|nuclear receptor coactivator 4##X77548|NCOA4|8031|nuclear receptor coactivator 4	0.188556	
chr1	206955969	206956125	reg1029242.p1	4.122	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-10168	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-97576	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-146937	+	AY040367 NM_153758 AB463800	16179	+	AF453946 NM_013371	46174	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	83128	+	AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20	0.0	
chr12	109011842	109011939	reg1004502.p1	4.122	+	AY358389 NM_181724 TSC_hg19_v1_chr12_-_108991924	-19982	-	TSC_hg19_v1_chr12_-_108991861 AK097290	-20038	-	AK295288 TSC_hg19_v1_chr12_-_108991834	-20057	-	AK298742 NM_001206609	13949	-	AK225644 U02297 AK295238 TSC_hg19_v1_chr12_-_109027584	15684	-	TSC_hg19_v1_chr12_-_109027639 AK300057 AK290395 BC029782	15743	-	AY358389|TMEM119|338773|transmembrane protein 119##NM_181724|TMEM119|338773|transmembrane protein 119##AK097290|TMEM119|338773|transmembrane protein 119##AK295288|TMEM119|338773|transmembrane protein 119##AK298742|SELPLG|6404|selectin P ligand##NM_001206609|SELPLG|6404|selectin P ligand##AK225644|SELPLG|6404|selectin P ligand##U02297|SELPLG|6404|selectin P ligand##AK295238|SELPLG|6404|selectin P ligand##AK290395|SELPLG|6404|selectin P ligand##BC029782|SELPLG|6404|selectin P ligand	0.0	
chr14	22974871	22974982	reg1028503.p2	4.122	+	AB463964 NM_001001912 AY726598	-841604	+	NM_001005466 AB529274 BC137371 BC137382	-871880	-	AB528817 NM_001005465	-936052	-	X58763 TSC_hg19_v1_chr14_+_22989364	14423	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	83160	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	83208	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.107102	
chr14	50396817	50396931	reg1027605.p2	4.122	+	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-36468	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-37041	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	-37056	+	AK091232 AX746864 NM_001012706	77363	-	AF390030 NM_001014830	162486	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	186396	-	AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6##AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D	0.0	
chr15	42102962	42103043	reg1000044.p1	4.122	+	AK302482 TSC_hg19_v1_chr15_+_42066879 AL833267 AB011168 BC113983 BC114493 AK091616 AK292414	-36164	+	BC036660 NM_001128608 NM_014994 TSC_hg19_v1_chr15_+_42066666 BX648786	-36344	+	AB011090 TSC_hg19_v1_chr15_+_42052630	-50399	+	TSC_hg19_v1_chr15_+_42120310 AK289833 NM_001114632 NM_001198588 NM_005090 AB209150 AK000814 BC139899 AK000663 AK225503 AK000550 BC067834 AF065215 AK290051 DQ523799 DQ523800 AF121908 BC110415 BC025290 CU692962	17256	+	AK310651 NM_001114633 AK299419	28025	+	AF233523 NM_016642	83272	-	AK302482|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AL833267|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AB011168|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BC113983|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BC114493|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK091616|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AK292414|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BC036660|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##NM_001128608|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##NM_014994|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##BX648786|MAPKBP1|23005|mitogen-activated protein kinase binding protein 1##AB011090|MGA|23269|MAX gene associated##AK289833|JMJD7|100137047|jumonji domain containing 7##NM_001114632|JMJD7|100137047|jumonji domain containing 7##NM_001198588|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##NM_005090|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AB209150|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AK000814|JMJD7|100137047|jumonji domain containing 7##BC139899|JMJD7|100137047|jumonji domain containing 7##AK000663|JMJD7|100137047|jumonji domain containing 7##AK225503|JMJD7|100137047|jumonji domain containing 7##AK000550|JMJD7|100137047|jumonji domain containing 7##BC067834|JMJD7|100137047|jumonji domain containing 7##AF065215|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AK290051|JMJD7|100137047|jumonji domain containing 7##DQ523799|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##DQ523800|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##AF121908|JMJD7-PLA2G4B|8681|JMJD7-PLA2G4B readthrough##BC110415|JMJD7|100137047|jumonji domain containing 7##BC025290|JMJD7|100137047|jumonji domain containing 7##AK310651|PLA2G4B|100137049|phospholipase A2, group IVB (cytosolic)##NM_001114633|PLA2G4B|100137049|phospholipase A2, group IVB (cytosolic)##AK299419|PLA2G4B|100137049|phospholipase A2, group IVB (cytosolic)##AF233523|SPTBN5|51332|spectrin, beta, non-erythrocytic 5##NM_016642|SPTBN5|51332|spectrin, beta, non-erythrocytic 5	0.583339	CTCF.p2:-11:0.583
chr16	9102557	9102663	reg1004580.p1	4.122	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-45315	-	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	-139750	-	NM_001042476 BC001333	-140358	-	TSC_hg19_v1_chr16_+_9185545 NM_014117	82930	+	TSC_hg19_v1_chr16_+_9185577 BC113570	82993	+	BC143273 U09002 NM_001134408	1173223	-	NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##BC113570|C16orf72|29035|chromosome 16 open reading frame 72##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.0	
chr2	6485736	6485881	reg1031267.p1	4.122	+	U23752 AB028641 NM_003108 BC025789 AB464713	-652993	+	AK302299 NM_018436 BC029652	-2780011	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-2843239	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	520092	-	TSC_hg19_v1_chr2_-_7006650 AK308509	520895	-	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	532055	+	U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2	0.0	
chr2	97193043	97193223	reg1024333.p1	4.122	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-191597	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-191657	+	NM_178495 NM_001163524 BC034503	-201185	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	9352	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	110886	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	110934	-	BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_178495|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163524|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC034503|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.0	
chr3	50191986	50192117	reg1033923.p1	4.122	+	TSC_hg19_v1_chr3_+_50126425 U23946	-65616	+	TSC_hg19_v1_chr3_+_50126354 AF091263 AK297249 AK302766 AK297445 AK314032 BC002957 AB208813 AF103802 AF107493 AB586690	-65671	+	NM_005778 TSC_hg19_v1_chr3_+_50126351	-65706	+	TSC_hg19_v1_chr3_+_50192514 AB209259	446	+	BC042914 NM_004186 U33920	855	+	DQ426874 NM_000172 NM_144499 X15088 BC095505 AF493908	37039	+	U23946|RBM5|10181|RNA binding motif protein 5##AF091263|RBM5|10181|RNA binding motif protein 5##AK297249|RBM5|10181|RNA binding motif protein 5##AK302766|RBM5|10181|RNA binding motif protein 5##AK297445|RBM5|10181|RNA binding motif protein 5##AK314032|RBM5|10181|RNA binding motif protein 5##BC002957|RBM5|10181|RNA binding motif protein 5##AB208813|RBM5|10181|RNA binding motif protein 5##AF103802|RBM5|10181|RNA binding motif protein 5##AF107493|RBM5|10181|RNA binding motif protein 5##AB586690|RBM5|10181|RNA binding motif protein 5##NM_005778|RBM5|10181|RNA binding motif protein 5##AB209259|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##BC042914|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##NM_004186|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##U33920|SEMA3F|6405|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F##NM_000172|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##NM_144499|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##X15088|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##BC095505|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1##AF493908|GNAT1|2779|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1	0.966988	CTCF.p2:-30:0.967
chr6	119056623	119056765	reg1031621.p2	4.122	+	BC110835 BC064835 NM_001178035	-25461	-	BC048977 BC052778 NM_001042475 NM_206921 BC036553	-83658	-	NM_002667 M63603 AK311799 BC005269	-187229	+	NM_014034 AK025738 AL050261 BC010878 AB028628 AF279306 CU679835 CR457347	158714	+	DQ892465 DQ895678 NM_017696	196200	-	TSC_hg19_v1_chr6_-_119256163 AK122665	199479	-	BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##DQ892465|MCM9|254394|minichromosome maintenance complex component 9##DQ895678|MCM9|254394|minichromosome maintenance complex component 9##NM_017696|MCM9|254394|minichromosome maintenance complex component 9##AK122665|MCM9|254394|minichromosome maintenance complex component 9	0.250391	CTCF.p2:-10:0.250
chr6	42488592	42488699	reg1028369.p1	4.122	+	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	-68822	-	TSC_hg19_v1_chr6_-_42185603 NM_018141	-303028	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-303045	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	43105	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	43132	+	TSC_hg19_v1_chr6_+_42531956 AY061884 CU687884	43359	+	AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.0	
chr9	2016266	2016333	reg1033357.p1	4.122	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-1003	+	AF130729 NM_181872	-965690	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-965929	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	605508	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	605775	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	605813	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.010958	
chr11	85850072	85850220	reg1029809.p1	4.121	+	AK300275 NM_001206947	-69236	-	TSC_hg19_v1_chr11_-_85780127 AB210017 NM_001008660 NM_001206946 NM_007166 AK291414	-70022	-	TSC_hg19_v1_chr11_-_85780088 BC064357	-70051	-	TSC_hg19_v1_chr11_+_85955830 NM_003797 NM_152991 AK292120 AF080227	105713	+	AF070418 TSC_hg19_v1_chr11_+_85956058	105903	+	AF099032 U90651 TSC_hg19_v1_chr11_+_85956254	106071	+	AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AB210017|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001008660|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206946|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_007166|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AK291414|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC064357|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_003797|EED|8726|embryonic ectoderm development##NM_152991|EED|8726|embryonic ectoderm development##AK292120|EED|8726|embryonic ectoderm development##AF080227|EED|8726|embryonic ectoderm development##AF070418|EED|8726|embryonic ectoderm development##AF099032|EED|8726|embryonic ectoderm development##U90651|EED|8726|embryonic ectoderm development	0.0	
chr1	207846015	207846128	reg1036135.p1	4.121	+	NM_175710 BC109190 BC109191	-27584	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	-176493	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-218410	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	79322	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	79412	+	BX640941 TSC_hg19_v1_chr1_-_208059392	213252	-	NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein	0.0	
chr12	117463704	117463884	reg1000813.p2	4.121	+	TSC_hg19_v1_chr12_+_117348781 BC037296 NM_012174 NM_153348 AK289621 AF176707 BC075823	-115008	+	NM_003806 U76376	-144563	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	-287675	+	DQ894644 TSC_hg19_v1_chr12_-_117537222 AF443207 BC015221 NM_001168325 NM_017899 AK000614	73469	-	AL136899 TSC_hg19_v1_chr12_-_117628277 BC091496 AF174601 AB020682 AK001699 AK314573 BC034045 BC042333 AK308141 NM_015002 NM_033624	164431	-	NM_001204213	279062	-	BC037296|FBXW8|26259|F-box and WD repeat domain containing 8##NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8##NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8##AK289621|FBXW8|26259|F-box and WD repeat domain containing 8##AF176707|FBXW8|26259|F-box and WD repeat domain containing 8##NM_003806|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##U76376|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2##DQ894644|TESC|54997|tescalcin##AF443207|TESC|54997|tescalcin##BC015221|TESC|54997|tescalcin##NM_001168325|TESC|54997|tescalcin##NM_017899|TESC|54997|tescalcin##AK000614|TESC|54997|tescalcin##AL136899|FBXO21|23014|F-box protein 21##BC091496|FBXO21|23014|F-box protein 21##AF174601|FBXO21|23014|F-box protein 21##AB020682|FBXO21|23014|F-box protein 21##AK001699|FBXO21|23014|F-box protein 21##AK314573|FBXO21|23014|F-box protein 21##BC034045|FBXO21|23014|F-box protein 21##BC042333|FBXO21|23014|F-box protein 21##AK308141|FBXO21|23014|F-box protein 21##NM_015002|FBXO21|23014|F-box protein 21##NM_033624|FBXO21|23014|F-box protein 21##NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)	0.0	
chr12	122018841	122019007	reg1032108.p1	4.121	+	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	-10	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	-665	-	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	-113850	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	45719	+	BC057760 NM_173855	88635	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	131820	+	BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B	0.0	
chr1	89985617	89985696	reg1009278.p2	4.121	+	NM_198460 AK131356	-156212	+	AY358953 AK090479 AF328727 AF430643 TSC_hg19_v1_chr1_-_89738544 BC031639 AF430642 NM_001134486 NM_052942	-247142	-	AK304245 AB527149 AF288814 AK131094 AL832576 BC070055 BC017889 AK312417 BC008421 NM_052941	-321085	-	NM_001134476 TSC_hg19_v1_chr1_+_89990414	4759	+	TSC_hg19_v1_chr1_+_89990454 BC060782 BC030607	4820	+	AF385436 NM_015350	38615	+	NM_198460|GBP6|163351|guanylate binding protein family, member 6##AK131356|GBP6|163351|guanylate binding protein family, member 6##AY358953|GBP5|115362|guanylate binding protein 5##AK090479|GBP5|115362|guanylate binding protein 5##AF328727|GBP5|115362|guanylate binding protein 5##AF430643|GBP5|115362|guanylate binding protein 5##BC031639|GBP5|115362|guanylate binding protein 5##AF430642|GBP5|115362|guanylate binding protein 5##NM_001134486|GBP5|115362|guanylate binding protein 5##NM_052942|GBP5|115362|guanylate binding protein 5##AK304245|GBP4|115361|guanylate binding protein 4##AF288814|GBP4|115361|guanylate binding protein 4##AK131094|GBP4|115361|guanylate binding protein 4##AL832576|GBP4|115361|guanylate binding protein 4##BC070055|GBP4|115361|guanylate binding protein 4##BC017889|GBP4|115361|guanylate binding protein 4##AK312417|GBP4|115361|guanylate binding protein 4##BC008421|GBP4|115361|guanylate binding protein 4##NM_052941|GBP4|115361|guanylate binding protein 4##NM_001134476|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC060782|LRRC8B|23507|leucine rich repeat containing 8 family, member B##BC030607|LRRC8B|23507|leucine rich repeat containing 8 family, member B##AF385436|LRRC8B|23507|leucine rich repeat containing 8 family, member B##NM_015350|LRRC8B|23507|leucine rich repeat containing 8 family, member B	0.0	
chr2	161945307	161945447	reg1036298.p1	4.121	+	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	-595060	-	CU676342 D28482 X77494 AK225887 L11289 TSC_hg19_v1_chr2_-_161350025 AK309949 BC012992 BC012993 AK297812	-595418	-	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	-815188	-	NM_004180 NM_133484 U59863 U63830	48088	+	TSC_hg19_v1_chr2_+_162016938 AK313096 NM_001199135 BC067779	71572	+	NM_005805 TSC_hg19_v1_chr2_+_162164936 BC066336	219485	+	BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_004180|TANK|10010|TRAF family member-associated NFKB activator##NM_133484|TANK|10010|TRAF family member-associated NFKB activator##U59863|TANK|10010|TRAF family member-associated NFKB activator##U63830|TANK|10010|TRAF family member-associated NFKB activator##AK313096|TANK|10010|TRAF family member-associated NFKB activator##NM_001199135|TANK|10010|TRAF family member-associated NFKB activator##BC067779|TANK|10010|TRAF family member-associated NFKB activator##NM_005805|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14##BC066336|PSMD14|10213|proteasome (prosome, macropain) 26S subunit, non-ATPase, 14	0.0	
chr3	189286057	189286133	reg1028866.p2	4.121	+	AK125682 NM_198485 BC101550 BC101552	-396284	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-621125	+	NM_001167671 BC130584 BC144076	-1342861	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	63164	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	221423	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	552600	-	AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1	0.0	
chr3	195946274	195946399	reg1024152.p1	4.121	+	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	-2942	+	BC034801 BC022078 NM_001039617 AK122907	-8055	-	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-137320	-	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	68199	-	BC046355 NM_005017 TSC_hg19_v1_chr3_-_196014591 AK304534 AK309073	68282	-	TSC_hg19_v1_chr3_-_196045112 BC015348 BC021177 NM_152773	98777	-	AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##BC046355|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##NM_005017|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK304534|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309073|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##BC015348|TCTEX1D2|255758|Tctex1 domain containing 2##BC021177|TCTEX1D2|255758|Tctex1 domain containing 2##NM_152773|TCTEX1D2|255758|Tctex1 domain containing 2	0.0	
chr3	38537912	38538092	reg1011466.p2	4.121	+	TSC_hg19_v1_chr3_+_38537982 AK315814	-22	+	BC015820 TSC_hg19_v1_chr3_+_38537851 BC065368 AK023235 AK289602	-152	+	TSC_hg19_v1_chr3_+_38537830 AK290107 NM_001145464 NM_005107 AB020523 BC104213 BC104212 AK301067 AK308814	-207	+	M77235 NM_000335 NM_001099404 NM_001099405 NM_198056 BC051374 NM_001160160 NM_001160161	153138	-	AF117907 NM_006514	297498	-	AF109737 AF150882 NM_014139	454049	-	AK315814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC015820|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC065368|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK023235|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK289602|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK290107|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##NM_001145464|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##NM_005107|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AB020523|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC104213|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC104212|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK301067|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK308814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##M77235|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_000335|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099404|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099405|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_198056|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##BC051374|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160160|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160161|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##AF117907|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##NM_006514|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit	0.0	
chr5	80479014	80479080	reg1031197.p1	4.121	+	AF023130 AF181250 TSC_hg19_v1_chr5_+_80256561	-222488	+	TSC_hg19_v1_chr5_+_80256463 BC126112 BC136296 BC143870 NM_006909	-222565	+	TSC_hg19_v1_chr5_-_79950786 BC003584 BC071996 NM_000791	-528252	-	NM_001099735 NM_001099736 NM_001825 TSC_hg19_v1_chr5_+_80529140 AK313293 BC029140 AK122769	50101	+	TSC_hg19_v1_chr5_-_80597338 AK096014	118278	-	AK092460 TSC_hg19_v1_chr5_-_80597373 AK096680	118325	-	AF023130|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF181250|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC126112|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC136296|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC143870|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_006909|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC003584|DHFR|1719|dihydrofolate reductase##BC071996|DHFR|1719|dihydrofolate reductase##NM_000791|DHFR|1719|dihydrofolate reductase##NM_001099735|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001099736|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001825|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK313293|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##BC029140|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK122769|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK096014|LOC100131067|100131067|uncharacterized LOC100131067##AK092460|LOC100131067|100131067|uncharacterized LOC100131067##AK096680|LOC100131067|100131067|uncharacterized LOC100131067	0.0	
chr6	106973183	106973364	reg1027629.p2	4.121	+	TSC_hg19_v1_chr6_+_106960443 U83115	-12862	+	AK056705 NM_001624	-13544	+	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	-199610	-	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	104007	-	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	104224	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	376199	+	U83115|AIM1|202|absent in melanoma 1##AK056705|AIM1|202|absent in melanoma 1##NM_001624|AIM1|202|absent in melanoma 1##CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203	0.0	
chr6	551482	551608	reg1036428.p1	4.121	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-159781	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-259048	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-259460	+	AF508547 BC101697 BC101699 NM_148959	105408	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	141545	-	BC053850 NM_033260	761129	+	NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1	0.092148	
chr1	10571049	10571126	reg1029424.p1	4.120	+	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-36076	+	TSC_hg19_v1_chr1_-_10532605 NM_004401 NM_213566	-38465	-	TSC_hg19_v1_chr1_-_10532555 AB590590 BT006980 CU675773 BC000037 AF103799 AF087573 BC007721 AK313317 AK222546 U91985 BC007112	-38532	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	183464	-	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	285618	-	NM_001170754	471006	-	AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_004401|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##NM_213566|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BT006980|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC000037|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF103799|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF087573|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007721|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK313317|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK222546|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##U91985|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007112|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127	0.0	
chr13	65046200	65046301	reg1032725.p1	4.120	+	AK289924 NM_022843	-3056596	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-3056997	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-4074771	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	2758254	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	5636291	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	7394009	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.213509	CTCF.p2:-9:0.214
chr18	43266908	43267066	reg1030175.p1	4.120	+	AF349446 NM_007163	-72222	+	NM_001242692 AK292422	-474035	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-1006119	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	37117	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	37170	+	NM_001146037	39930	+	AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.0	
chr19	46784274	46784413	reg1005477.p2	4.120	+	AY359013 NM_198541 AY672111	-51334	+	AY358692 NM_001135113	-132844	+	AY672112 NM_001002915	-133305	+	TSC_hg19_v1_chr19_+_46800304 NM_152795 AF463492 BC026308 AB118749 AB295039 AK027725 AB527715 BC080551	15970	+	NM_022462 NM_152796 AK297828 AK304747 TSC_hg19_v1_chr19_+_46801682 AK021421 AK021653 AK024095	17317	+	AK314680 NM_152794 AB054067	22546	+	AY359013|IGFL1|374918|IGF-like family member 1##NM_198541|IGFL1|374918|IGF-like family member 1##AY672111|IGFL1|374918|IGF-like family member 1##AY358692|IGFL2|147920|IGF-like family member 2##NM_001135113|IGFL2|147920|IGF-like family member 2##AY672112|IGFL2|147920|IGF-like family member 2##NM_001002915|IGFL2|147920|IGF-like family member 2##NM_152795|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AF463492|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##BC026308|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AB118749|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AB295039|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK027725|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##BC080551|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##NM_022462|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##NM_152796|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK297828|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK304747|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK021421|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK021653|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK024095|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AK314680|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##NM_152794|HIF3A|64344|hypoxia inducible factor 3, alpha subunit##AB054067|HIF3A|64344|hypoxia inducible factor 3, alpha subunit	0.0	
chr21	34060432	34060569	reg1033108.p2	4.120	+	AL355729 TSC_hg19_v1_chr21_-_33984897 AK055328 AK223318 AK225697 AK300970 AK000474 AK098577 NM_021254	-75606	-	TSC_hg19_v1_chr21_-_33984683 AF282851 BC000709	-75822	-	DQ655907 DQ655908 TSC_hg19_v1_chr21_-_33984495 CU674350 DQ656039	-75978	-	BC098395 TSC_hg19_v1_chr21_-_34100223	39718	-	TSC_hg19_v1_chr21_-_34100236 AK307762 BC019630 AB020717 NM_001160302 NM_001160306 AF009039 AF009040	39758	-	TSC_hg19_v1_chr21_-_34100325 NM_003895 NM_203446	39833	-	AK055328|C21orf59|56683|chromosome 21 open reading frame 59##AK223318|C21orf59|56683|chromosome 21 open reading frame 59##AK225697|C21orf59|56683|chromosome 21 open reading frame 59##AK300970|C21orf59|56683|chromosome 21 open reading frame 59##AK000474|C21orf59|56683|chromosome 21 open reading frame 59##AK098577|C21orf59|56683|chromosome 21 open reading frame 59##NM_021254|C21orf59|56683|chromosome 21 open reading frame 59##AF282851|C21orf59|56683|chromosome 21 open reading frame 59##BC000709|C21orf59|56683|chromosome 21 open reading frame 59##DQ655907|C21orf59|56683|chromosome 21 open reading frame 59##DQ655908|C21orf59|56683|chromosome 21 open reading frame 59##DQ656039|C21orf59|56683|chromosome 21 open reading frame 59##BC098395|SYNJ1|8867|synaptojanin 1##AK307762|SYNJ1|8867|synaptojanin 1##BC019630|SYNJ1|8867|synaptojanin 1##AB020717|SYNJ1|8867|synaptojanin 1##NM_001160302|SYNJ1|8867|synaptojanin 1##NM_001160306|SYNJ1|8867|synaptojanin 1##AF009039|SYNJ1|8867|synaptojanin 1##AF009040|SYNJ1|8867|synaptojanin 1##NM_003895|SYNJ1|8867|synaptojanin 1##NM_203446|SYNJ1|8867|synaptojanin 1	0.282924	CTCF.p2:-25:0.283
chr3	61235896	61236035	reg1031808.p1	4.120	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-2200205	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-2200224	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-2200257	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	1125	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	311246	+	BC047734 TSC_hg19_v1_chr3_+_61547294	311321	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.0	
chr4	38320542	38320620	reg1006854.p1	4.120	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-341564	+	AF095288 BC069114 BC069400 NM_006607	-358526	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-427792	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	345245	+	AF289565 TSC_hg19_v1_chr4_-_38666549	345908	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	464018	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr6	25992872	25992969	reg1029735.p1	4.120	+	CR936707 TSC_hg19_v1_chr6_+_25963398	-29512	+	TSC_hg19_v1_chr6_+_25963029 BX640949 AK313248 BC026930 NM_006355 AB209906	-29887	+	U90544 NM_005835	-62029	-	CU686848 AB590705 EU446958 BC069492 TSC_hg19_v1_chr6_-_26018016 BC101593 BC112140 NM_005325	25079	-	TSC_hg19_v1_chr6_+_26020680 BC066245 BC066246 BC066247 BC067490 BC067491 BC069303 CR541858 NM_003529	27777	+	BC066248 BC066249 BC067495 BC069654 NM_003538	28986	+	CR936707|TRIM38|10475|tripartite motif containing 38##BX640949|TRIM38|10475|tripartite motif containing 38##AK313248|TRIM38|10475|tripartite motif containing 38##BC026930|TRIM38|10475|tripartite motif containing 38##NM_006355|TRIM38|10475|tripartite motif containing 38##AB209906|TRIM38|10475|tripartite motif containing 38##U90544|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2##NM_005835|SLC17A2|10246|solute carrier family 17 (sodium phosphate), member 2##EU446958|HIST1H1A|3024|histone cluster 1, H1a##BC069492|HIST1H1A|3024|histone cluster 1, H1a##BC101593|HIST1H1A|3024|histone cluster 1, H1a##BC112140|HIST1H1A|3024|histone cluster 1, H1a##NM_005325|HIST1H1A|3024|histone cluster 1, H1a##BC066245|HIST1H3A|8350|histone cluster 1, H3a##BC066246|HIST1H3A|8350|histone cluster 1, H3a##BC066247|HIST1H3A|8350|histone cluster 1, H3a##BC067490|HIST1H3A|8350|histone cluster 1, H3a##BC067491|HIST1H3A|8350|histone cluster 1, H3a##BC069303|HIST1H3A|8350|histone cluster 1, H3a##CR541858|HIST1H3A|8350|histone cluster 1, H3a##NM_003529|HIST1H3A|8350|histone cluster 1, H3a##BC066248|HIST1H4A|8359|histone cluster 1, H4a##BC066249|HIST1H4A|8359|histone cluster 1, H4a##BC067495|HIST1H4A|8359|histone cluster 1, H4a##BC069654|HIST1H4A|8359|histone cluster 1, H4a##NM_003538|HIST1H4A|8359|histone cluster 1, H4a	0.385911	CTCF.p2:103:0.201
chr7	75472189	75472369	reg1034150.p1	4.120	+	AJ223461 BC069072 BC069391 NM_002991 U85768 AB590965 CU686790	-29250	-	NM_006072 AY358893	-53141	-	TSC_hg19_v1_chr7_-_75368305 AF486833 NM_001243198 NM_005338	-103969	-	AF226732 TSC_hg19_v1_chr7_+_75508369 NM_001040456 NM_001040457 BC069017 AK026590	36055	+	NM_000941 AK290529 TSC_hg19_v1_chr7_+_75544442	72162	+	BX648619 TSC_hg19_v1_chr7_+_75544474 AK129978 AK312543	72196	+	AJ223461|CCL24|6369|chemokine (C-C motif) ligand 24##BC069072|CCL24|6369|chemokine (C-C motif) ligand 24##BC069391|CCL24|6369|chemokine (C-C motif) ligand 24##NM_002991|CCL24|6369|chemokine (C-C motif) ligand 24##U85768|CCL24|6369|chemokine (C-C motif) ligand 24##NM_006072|CCL26|10344|chemokine (C-C motif) ligand 26##AY358893|CCL26|10344|chemokine (C-C motif) ligand 26##AF486833|HIP1|3092|huntingtin interacting protein 1##NM_001243198|HIP1|3092|huntingtin interacting protein 1##NM_005338|HIP1|3092|huntingtin interacting protein 1##AF226732|RHBDD2|57414|rhomboid domain containing 2##NM_001040456|RHBDD2|57414|rhomboid domain containing 2##NM_001040457|RHBDD2|57414|rhomboid domain containing 2##BC069017|RHBDD2|57414|rhomboid domain containing 2##AK026590|RHBDD2|57414|rhomboid domain containing 2##NM_000941|POR|5447|P450 (cytochrome) oxidoreductase##AK290529|POR|5447|P450 (cytochrome) oxidoreductase##BX648619|POR|5447|P450 (cytochrome) oxidoreductase##AK129978|POR|5447|P450 (cytochrome) oxidoreductase##AK312543|POR|5447|P450 (cytochrome) oxidoreductase	0.0	
chrX	29635990	29636091	reg1031486.p1	4.120	+	AF181284 AJ243874 NM_014271	-1030421	+	AK128123 NM_001017930	-1636475	-	AK057527 NM_182506 BC101307 BC101309 BC101310	-1809925	+	NM_002364 AF015766 AK313347 BC026071 AK223081	597643	+	AK057441 NM_002365	612512	+	NM_002367 AK313769 BC032852 DQ891236 DQ894421 CR541779	624114	+	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##NM_002364|MAGEB2|4113|melanoma antigen family B, 2##AF015766|MAGEB2|4113|melanoma antigen family B, 2##AK313347|MAGEB2|4113|melanoma antigen family B, 2##BC026071|MAGEB2|4113|melanoma antigen family B, 2##AK223081|MAGEB2|4113|melanoma antigen family B, 2##AK057441|MAGEB3|4114|melanoma antigen family B, 3##NM_002365|MAGEB3|4114|melanoma antigen family B, 3##NM_002367|MAGEB4|4115|melanoma antigen family B, 4##AK313769|MAGEB4|4115|melanoma antigen family B, 4##BC032852|MAGEB4|4115|melanoma antigen family B, 4##DQ891236|MAGEB4|4115|melanoma antigen family B, 4##DQ894421|MAGEB4|4115|melanoma antigen family B, 4##CR541779|MAGEB4|4115|melanoma antigen family B, 4	0.018837	
chr1	20407638	20407751	reg1027254.p2	4.119	+	TSC_hg19_v1_chr1_+_20396654 NM_000929 BC036792 U03090	-10950	+	BC005919 NM_000300 NM_001161727 NM_001161728	-100775	-	M22430 AK291302 NM_001161729	-101572	-	AB590095 AM392918 AM392954 AM392977 AM393597 AM393824 BC025706 NM_012400 AF112982 AY358606 AK290406 AF188625 AK310156 AK311903 AK301396	38330	-	AK093645 AX748240 BX647458 NM_022819 AB528809	58174	+	TSC_hg19_v1_chr1_+_20480706 BC041651	73069	+	NM_000929|PLA2G5|5322|phospholipase A2, group V##BC036792|PLA2G5|5322|phospholipase A2, group V##U03090|PLA2G5|5322|phospholipase A2, group V##BC005919|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_000300|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161727|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161728|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##M22430|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##AK291302|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161729|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##AM392918|PLA2G2D|26279|phospholipase A2, group IID##AM392954|PLA2G2D|26279|phospholipase A2, group IID##AM392977|PLA2G2D|26279|phospholipase A2, group IID##AM393597|PLA2G2D|26279|phospholipase A2, group IID##AM393824|PLA2G2D|26279|phospholipase A2, group IID##BC025706|PLA2G2D|26279|phospholipase A2, group IID##NM_012400|PLA2G2D|26279|phospholipase A2, group IID##AF112982|PLA2G2D|26279|phospholipase A2, group IID##AY358606|PLA2G2D|26279|phospholipase A2, group IID##AK290406|PLA2G2D|26279|phospholipase A2, group IID##AF188625|PLA2G2D|26279|phospholipase A2, group IID##AK310156|PLA2G2D|26279|phospholipase A2, group IID##AK311903|PLA2G2D|26279|phospholipase A2, group IID##AK301396|PLA2G2D|26279|phospholipase A2, group IID##AK093645|PLA2G2F|64600|phospholipase A2, group IIF##BX647458|PLA2G2F|64600|phospholipase A2, group IIF##NM_022819|PLA2G2F|64600|phospholipase A2, group IIF	0.045913	
chr2	145275825	145275901	reg1031189.p1	4.119	+	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-660	-	AB193095 AB193096 AB463360 TSC_hg19_v1_chr2_-_145274968	-921	-	BX647773 TSC_hg19_v1_chr2_-_145090075 BX647436 NM_001164629	-185799	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	1768	-	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	2058	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	3326254	+	AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AB193095|ZEB2|9839|zinc finger E-box binding homeobox 2##AB193096|ZEB2|9839|zinc finger E-box binding homeobox 2##BX647773|GTDC1|79712|glycosyltransferase-like domain containing 1##BX647436|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001164629|GTDC1|79712|glycosyltransferase-like domain containing 1##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA	0.0	
chr7	2648687	2648814	reg1031472.p1	4.119	+	AK092404 AX747526 TSC_hg19_v1_chr7_+_2598712 BC061518 AL136792 AK293372	-50003	+	TSC_hg19_v1_chr7_+_2598682 AK309646 BC043150	-50061	+	TSC_hg19_v1_chr7_+_2598649 AK302053	-50095	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	22853	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	22953	+	AK289723 AB075830 BC146753 NM_133463	70408	+	AK092404|IQCE|23288|IQ motif containing E##BC061518|IQCE|23288|IQ motif containing E##AL136792|IQCE|23288|IQ motif containing E##AK293372|IQCE|23288|IQ motif containing E##AK309646|IQCE|23288|IQ motif containing E##BC043150|IQCE|23288|IQ motif containing E##AK302053|IQCE|23288|IQ motif containing E##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1	0.076509	
chr7	55602017	55602198	reg1031748.p1	4.119	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	-168535	+	AK095857 NM_018697	-168967	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-515161	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	37933	-	TSC_hg19_v1_chr7_-_55640073 AB097004	37975	-	BC016650 AK314338 TSC_hg19_v1_chr7_-_55640107	37998	-	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AB097004|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##BC016650|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK314338|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	0.0	
chr8	103250849	103251018	reg1034574.p2	4.119	+	NM_001040630	-113799	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	-114410	-	NM_032041	-447495	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	240	-	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	173978	-	NM_024410 AK315276 BC104456 BC104457	312928	+	NM_001040630|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_032041|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1	0.0	
chr9	127539580	127539749	reg1032855.p1	4.119	+	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	-164	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	-6154	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	-118960	+	BC150645 BC171828 BC171830 BC171837 BC127949 TSC_hg19_v1_chr9_+_127615749 NM_001045476	76060	+	TSC_hg19_v1_chr9_-_127624226 BC071915 U12465 BC000348 AK291072 BC010919 D28448 NM_007209	84553	-	TSC_hg19_v1_chr9_+_127624397 AK056174	84730	+	AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A##HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##BC150645|WDR38|401551|WD repeat domain 38##BC171828|WDR38|401551|WD repeat domain 38##BC171830|WDR38|401551|WD repeat domain 38##BC171837|WDR38|401551|WD repeat domain 38##BC127949|WDR38|401551|WD repeat domain 38##NM_001045476|WDR38|401551|WD repeat domain 38##BC071915|RPL35|11224|ribosomal protein L35##U12465|RPL35|11224|ribosomal protein L35##BC000348|RPL35|11224|ribosomal protein L35##AK291072|RPL35|11224|ribosomal protein L35##BC010919|RPL35|11224|ribosomal protein L35##D28448|RPL35|11224|ribosomal protein L35##NM_007209|RPL35|11224|ribosomal protein L35##AK056174|ARPC5L|81873|actin related protein 2/3 complex, subunit 5-like	0.027867	
chr10	64392297	64392477	reg1034943.p2	4.118	+	AJ505150 NM_199452	-112181	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-258344	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-363848	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	172155	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	172270	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	183710	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.013188	
chr1	161199775	161199899	reg1032719.p1	4.118	+	NM_032174 TSC_hg19_v1_chr1_+_161195849 AK022832 AK027704 AK297848 BX537951 AK297831	-3980	+	TSC_hg19_v1_chr1_-_161193419 AK312034 BC005282 NM_001643	-6439	-	BT006786 AB590164 DQ892493 DQ895705 AB106565 M29882 X00955 TSC_hg19_v1_chr1_-_161193333	-6574	-	AK310773 AY572806 AY572807 AY572808 AY572809 AY572810 AY572811 AY572812 AY572813 AY572814 AY572815 AY572816 AY572817 AY572818 AY572819 AY572820 AY572821 AY572822 AY572823 AY572824 AY572825 AY572826 AY572827 BC121120 BC121121 BC030972 BC069626 BC069651 AK316208 AK303757 NM_001077469 NM_001077470 NM_001077471 NM_001077472 NM_001077473 NM_001077474 NM_001077475 NM_001077476 NM_001077477 NM_001077478 NM_001077479 NM_001077480 NM_001077481 NM_001077482 NM_005122 AK303796	8119	-	BC028905 NM_001102566 TSC_hg19_v1_chr1_+_161228534 BC067884 BC147003 BC147004	28728	+	BT006765 DQ895885 EU176378 S66705 D10537 BC006491 AK313555 TSC_hg19_v1_chr1_-_161279760 NM_000530	79905	-	NM_032174|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK022832|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK027704|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK297848|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##BX537951|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK297831|TOMM40L|84134|translocase of outer mitochondrial membrane 40 homolog (yeast)-like##AK312034|APOA2|336|apolipoprotein A-II##BC005282|APOA2|336|apolipoprotein A-II##NM_001643|APOA2|336|apolipoprotein A-II##BT006786|APOA2|336|apolipoprotein A-II##DQ892493|APOA2|336|apolipoprotein A-II##DQ895705|APOA2|336|apolipoprotein A-II##AB106565|APOA2|336|apolipoprotein A-II##M29882|APOA2|336|apolipoprotein A-II##X00955|APOA2|336|apolipoprotein A-II##AK310773|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572806|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572807|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572808|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572809|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572810|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572811|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572812|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572813|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572814|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572815|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572816|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572817|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572818|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572819|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572820|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572821|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572822|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572823|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572824|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572825|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572826|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AY572827|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC121120|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC121121|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC030972|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC069626|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC069651|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK316208|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK303757|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077469|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077470|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077471|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077472|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077473|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077474|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077475|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077476|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077477|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077478|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077479|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077480|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077481|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_001077482|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##NM_005122|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##AK303796|NR1I3|9970|nuclear receptor subfamily 1, group I, member 3##BC028905|PCP4L1|654790|Purkinje cell protein 4 like 1##NM_001102566|PCP4L1|654790|Purkinje cell protein 4 like 1##BC067884|PCP4L1|654790|Purkinje cell protein 4 like 1##BC147003|PCP4L1|654790|Purkinje cell protein 4 like 1##BC147004|PCP4L1|654790|Purkinje cell protein 4 like 1##BT006765|MPZ|4359|myelin protein zero##DQ895885|MPZ|4359|myelin protein zero##EU176378|MPZ|4359|myelin protein zero##S66705|MPZ|4359|myelin protein zero##D10537|MPZ|4359|myelin protein zero##BC006491|MPZ|4359|myelin protein zero##AK313555|MPZ|4359|myelin protein zero##NM_000530|MPZ|4359|myelin protein zero	0.028888	
chr1	181103810	181103905	reg1039414.p1	4.118	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-45992	+	NM_016545	-46220	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-100707	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	348843	+	BC137223 BC137224 AK128654 NM_001009992	926940	-	TSC_hg19_v1_chr1_-_182354649 AK301600	1250825	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.0	
chr1	184943388	184943549	reg1025285.p2	4.118	+	TSC_hg19_v1_chr1_-_184724031 NM_025191	-219437	-	AK023095 TSC_hg19_v1_chr1_-_184724001	-219464	-	AK225171 TSC_hg19_v1_chr1_-_184723985 AK315118	-219484	-	BC018532 AK022527 AY550972 TSC_hg19_v1_chr1_-_184943641 BC030531 AK310557 AK311019 AK127373 AB050477	121	-	TSC_hg19_v1_chr1_-_184943680 AF288391 NM_052966	221	-	TSC_hg19_v1_chr1_+_185014449 NM_007212 AF141327	71035	+	NM_025191|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK023095|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK225171|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK315118|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC018532|FAM129A|116496|family with sequence similarity 129, member A##AK022527|FAM129A|116496|family with sequence similarity 129, member A##AY550972|FAM129A|116496|family with sequence similarity 129, member A##BC030531|FAM129A|116496|family with sequence similarity 129, member A##AK310557|FAM129A|116496|family with sequence similarity 129, member A##AK311019|FAM129A|116496|family with sequence similarity 129, member A##AB050477|FAM129A|116496|family with sequence similarity 129, member A##AF288391|FAM129A|116496|family with sequence similarity 129, member A##NM_052966|FAM129A|116496|family with sequence similarity 129, member A##NM_007212|RNF2|6045|ring finger protein 2##AF141327|RNF2|6045|ring finger protein 2	0.0	
chr1	25372635	25372779	reg1031247.p1	4.118	+	BC013362 AK310945 NM_001031680 AF022726	-81165	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-115921	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-115968	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	186280	-	BC065040 TSC_hg19_v1_chr1_-_25573922	201216	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	201266	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr12	77546514	77546630	reg1034314.p1	4.118	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-87283	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-273789	-	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	-388546	+	NM_014903 AJ488201	678560	+	AK094616 NM_001135805	1711200	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	1711903	+	BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17##NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I	0.192802	
chr16	58160976	58161094	reg1031994.p1	4.118	+	BC036495 BC055428 TSC_hg19_v1_chr16_+_58059491	-101553	+	NM_002428	-101754	+	TSC_hg19_v1_chr16_+_58035310 AK293220 AK298473 AK303121 BC010099 AK301494 BC004415 BC007774 BC006291 BC021554	-125703	+	TSC_hg19_v1_chr16_-_58163283 AK027099 AK297819 BC005152 AF087845 AF093680	2197	-	TSC_hg19_v1_chr16_-_58163286 NM_013242	2275	-	DQ893025 DQ896269 AB463465 BC008812 NM_001896	70676	-	BC036495|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##BC055428|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##NM_002428|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)##AK293220|C16orf57|79650|chromosome 16 open reading frame 57##AK298473|C16orf57|79650|chromosome 16 open reading frame 57##AK303121|C16orf57|79650|chromosome 16 open reading frame 57##BC010099|C16orf57|79650|chromosome 16 open reading frame 57##AK301494|C16orf57|79650|chromosome 16 open reading frame 57##BC004415|C16orf57|79650|chromosome 16 open reading frame 57##BC007774|C16orf57|79650|chromosome 16 open reading frame 57##BC006291|C16orf57|79650|chromosome 16 open reading frame 57##BC021554|C16orf57|79650|chromosome 16 open reading frame 57##AK027099|C16orf80|29105|chromosome 16 open reading frame 80##AK297819|C16orf80|29105|chromosome 16 open reading frame 80##BC005152|C16orf80|29105|chromosome 16 open reading frame 80##AF087845|C16orf80|29105|chromosome 16 open reading frame 80##AF093680|C16orf80|29105|chromosome 16 open reading frame 80##NM_013242|C16orf80|29105|chromosome 16 open reading frame 80##DQ893025|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##DQ896269|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##BC008812|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide##NM_001896|CSNK2A2|1459|casein kinase 2, alpha prime polypeptide	0.150898	
chr20	49416611	49416726	reg1035443.p2	4.118	+	AF361220 NM_001010974 NM_017843 NM_198799 TSC_hg19_v1_chr20_+_49411542 AK000502 BC038381 BC047337 AJ511266 BC056883	-5150	+	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	-68599	+	TSC_hg19_v1_chr20_-_49308074 AK124347	-108591	-	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	131055	-	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	158395	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	158700	+	AF361220|BCAS4|55653|breast carcinoma amplified sequence 4##NM_001010974|BCAS4|55653|breast carcinoma amplified sequence 4##NM_017843|BCAS4|55653|breast carcinoma amplified sequence 4##NM_198799|BCAS4|55653|breast carcinoma amplified sequence 4##AK000502|BCAS4|55653|breast carcinoma amplified sequence 4##BC038381|BCAS4|55653|breast carcinoma amplified sequence 4##BC047337|BCAS4|55653|breast carcinoma amplified sequence 4##AJ511266|BCAS4|55653|breast carcinoma amplified sequence 4##BC056883|BCAS4|55653|breast carcinoma amplified sequence 4##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3	0.0	
chr2	231812842	231813023	reg1036593.p2	4.118	+	BC032694 NM_005683	-22992	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-83210	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-83254	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	47960	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	89305	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	108645	+	BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.0	
chr3	121733846	121734020	reg1036360.p2	4.118	+	NM_001145998 NM_021082 AK289820 AK296895 AK302002 AK304189 BC020743 BC044572 BC038445 S78203	-120701	+	AF217516 NM_018456 TSC_hg19_v1_chr3_+_121554083 BC014589 AY049020 BC014209 AF517829 AK301560 AB528527 CU676923 DQ892648 DQ895887	-179853	+	TSC_hg19_v1_chr3_-_121553908 AB062481 AY714228 NM_001023570 NM_001023571	-180006	-	AY672837 AY672839 BC044240 AY134857 TSC_hg19_v1_chr3_-_121741095 AK129974 NM_001199799 NM_001199800 NM_175924	7114	-	NM_001206924 NM_001206925 NM_175862 AK294663 AK301237 AK316203 BC040261 L25259 AK291497 AK313103	40321	+	NM_006889 NM_176892 U04343	62789	+	NM_001145998|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##NM_021082|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK289820|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK296895|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK302002|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK304189|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC020743|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC044572|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC038445|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##S78203|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AF217516|EAF2|55840|ELL associated factor 2##NM_018456|EAF2|55840|ELL associated factor 2##BC014589|EAF2|55840|ELL associated factor 2##AY049020|EAF2|55840|ELL associated factor 2##BC014209|EAF2|55840|ELL associated factor 2##AF517829|EAF2|55840|ELL associated factor 2##AK301560|EAF2|55840|ELL associated factor 2##DQ892648|EAF2|55840|ELL associated factor 2##DQ895887|EAF2|55840|ELL associated factor 2##AB062481|IQCB1|9657|IQ motif containing B1##AY714228|IQCB1|9657|IQ motif containing B1##NM_001023570|IQCB1|9657|IQ motif containing B1##NM_001023571|IQCB1|9657|IQ motif containing B1##AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1##BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199799|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199800|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001206924|CD86|942|CD86 molecule##NM_001206925|CD86|942|CD86 molecule##NM_175862|CD86|942|CD86 molecule##AK294663|CD86|942|CD86 molecule##AK301237|CD86|942|CD86 molecule##AK316203|CD86|942|CD86 molecule##BC040261|CD86|942|CD86 molecule##L25259|CD86|942|CD86 molecule##AK291497|CD86|942|CD86 molecule##AK313103|CD86|942|CD86 molecule##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule	0.0	
chr4	4691586	4691689	reg1028582.p2	4.118	+	TSC_hg19_v1_chr4_+_4543925 BC025734	-147753	+	TSC_hg19_v1_chr4_-_4543750 NM_016930	-147876	-	TSC_hg19_v1_chr4_-_4543741 AK310026	-147906	-	TSC_hg19_v1_chr4_+_4861391 NM_002448 AK290636 M97676 BC021285	169761	+	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	329509	-	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	361643	+	BC025734|LOC100507266|100507266|uncharacterized LOC100507266##NM_016930|STX18|53407|syntaxin 18##AK310026|STX18|53407|syntaxin 18##NM_002448|MSX1|4487|msh homeobox 1##AK290636|MSX1|4487|msh homeobox 1##M97676|MSX1|4487|msh homeobox 1##BC021285|MSX1|4487|msh homeobox 1##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B	0.0	
chr6	21593689	21593869	reg1024472.p1	4.118	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1059056	+	CR749285 NM_001243076	-1189746	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-1191676	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	593	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	72880	+	BC015850 NM_000948	703950	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.0	
chr8	80680816	80680949	reg1032361.p1	4.118	+	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	-885	-	AK292737 TSC_hg19_v1_chr8_+_80523376 BC006302 S82024 AB528346 BT020034 CR456833 DQ892719 DQ895968 CU675343	-157479	+	TSC_hg19_v1_chr8_+_80523354 AK297594 AK308557 AK297485	-157523	+	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	261620	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	312147	-	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	402888	-	AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK292737|STMN2|11075|stathmin-like 2##BC006302|STMN2|11075|stathmin-like 2##S82024|STMN2|11075|stathmin-like 2##BT020034|STMN2|11075|stathmin-like 2##CR456833|STMN2|11075|stathmin-like 2##DQ892719|STMN2|11075|stathmin-like 2##DQ895968|STMN2|11075|stathmin-like 2##AK297594|STMN2|11075|stathmin-like 2##AK308557|STMN2|11075|stathmin-like 2##AK297485|STMN2|11075|stathmin-like 2##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52	0.0	
chr8	8229569	8229749	reg1024027.p2	4.118	+	TSC_hg19_v1_chr8_-_8175862 AF075060	-53771	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-143517	+	AK292586 NM_001193630	-445801	+	AK122582 NM_001080826	9563	-	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	330039	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	521279	-	AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1	0.0	
chr1	25357419	25357599	reg1029006.p2	4.117	+	BC013362 AK310945 NM_001031680 AF022726	-65967	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-100723	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-100770	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	201478	-	BC065040 TSC_hg19_v1_chr1_-_25573922	216414	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	216464	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr12	8113428	8113535	reg1027725.p2	4.117	+	CR457413 CU691674 DQ891118 DQ894297 DQ894299 AB209607 BC039196 AK304509 AK298673 AK312386 M20681 TSC_hg19_v1_chr12_-_8088888 NM_006931	-24715	-	AK299037 AK316238 TSC_hg19_v1_chr12_-_8043786	-69713	-	AK126026 AK122783 TSC_hg19_v1_chr12_-_8025469 AK302881 AF481878 BC060766 AF481879 NM_153449	-88015	-	TSC_hg19_v1_chr12_+_8185313 BC032608 NM_018416	72009	+	TSC_hg19_v1_chr12_-_8218956 U28488 AK290242 AK312458 BC020742 NM_004054 AK223388	105472	-	TSC_hg19_v1_chr12_-_8219032 U62027	105535	-	CR457413|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ891118|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894297|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894299|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AB209607|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##BC039196|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK304509|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK298673|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK312386|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##M20681|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##NM_006931|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK126026|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK122783|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK302881|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AF481878|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##BC060766|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AF481879|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##NM_153449|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##NM_018416|FOXJ2|55810|forkhead box J2##U28488|C3AR1|719|complement component 3a receptor 1##AK290242|C3AR1|719|complement component 3a receptor 1##AK312458|C3AR1|719|complement component 3a receptor 1##BC020742|C3AR1|719|complement component 3a receptor 1##NM_004054|C3AR1|719|complement component 3a receptor 1##AK223388|C3AR1|719|complement component 3a receptor 1##U62027|C3AR1|719|complement component 3a receptor 1	0.032747	
chr1	28286643	28286767	reg1040231.p2	4.117	+	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-187	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-25144	+	TSC_hg19_v1_chr1_-_28241258 BC021257 NM_002946	-45441	-	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	128419	-	NM_000952 NM_001164723	216749	-	S52624 AK292053 NM_001164721 NM_001164722	233707	-	AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC021257|RPA2|6118|replication protein A2, 32kDa##NM_002946|RPA2|6118|replication protein A2, 32kDa##BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor	0.0	
chr17	46452142	46452266	reg1033286.p1	4.117	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-267052	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-267219	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-273383	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	55334	-	TSC_hg19_v1_chr17_-_46507604 BC039040	55413	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	156067	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.988954	CTCF.p2:-1:0.989
chr1	9781723	9781898	reg1014520.p1	4.117	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	-70006	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-132854	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-182174	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	102085	-	TSC_hg19_v1_chr1_-_9884023 AK304813	102211	-	TSC_hg19_v1_chr1_-_9884024 BC033902	102234	-	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1	0.0	
chr3	45558967	45559147	reg1033720.p1	4.117	+	AK308146 BC025989 TSC_hg19_v1_chr3_+_45430067 D21851 NM_015340	-128993	+	TSC_hg19_v1_chr3_-_45267804 NM_015444	-291232	-	AB078417 AF438313 TSC_hg19_v1_chr3_-_45267780 BC057390	-291349	-	TSC_hg19_v1_chr3_+_45635397 M80651	76528	+	TSC_hg19_v1_chr3_+_45636176 BC117236 BC117238 NM_014240 AJ132408 HQ258355	77214	+	CR749564 TSC_hg19_v1_chr3_+_45730767 NM_014016	171676	+	AK308146|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##BC025989|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##D21851|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015340|LARS2|23395|leucyl-tRNA synthetase 2, mitochondrial##NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##M80651|LIMD1|8994|LIM domains containing 1##BC117236|LIMD1|8994|LIM domains containing 1##BC117238|LIMD1|8994|LIM domains containing 1##NM_014240|LIMD1|8994|LIM domains containing 1##AJ132408|LIMD1|8994|LIM domains containing 1##HQ258355|LIMD1|8994|LIM domains containing 1##CR749564|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##NM_014016|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)	0.203354	CTCF.p2:-43:0.203
chr5	177375196	177375294	reg1033041.p1	4.117	+	AB018295 NM_173663	-167761	-	TSC_hg19_v1_chr5_-_177099217 AK297457	-276016	-	TSC_hg19_v1_chr5_+_177027143 BC007317 NM_007255 BC072403 AY358578 BC062983 AB028600 AK023506 AF142675 DQ893010 DQ896256 AB527637 AJ005382	-348091	+	AF076215 NM_006261	47997	-	TSC_hg19_v1_chr5_+_177482580 AB055766	107333	+	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	165383	+	AB018295|FAM153A|285596|family with sequence similarity 153, member A##NM_173663|FAM153A|285596|family with sequence similarity 153, member A##AK297457|LOC202181|202181|chromosome 5 open reading frame 25 pseudogene##BC007317|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##NM_007255|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC072403|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AY358578|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC062983|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AB028600|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AK023506|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF142675|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ893010|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ896256|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AJ005382|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF076215|PROP1|5626|PROP paired-like homeobox 1##NM_006261|PROP1|5626|PROP paired-like homeobox 1##AB055766|RPL19|6143|ribosomal protein L19##BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3	0.100035	
chr6	14095796	14095902	reg1032972.p2	4.117	+	NM_001165033 AK090576 AX746519	-170406	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	-170683	+	NM_001165034	-171173	+	NM_001251901	21637	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	22056	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	22173	+	NM_001165033|RNF182|221687|ring finger protein 182##AK090576|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182##NM_001165034|RNF182|221687|ring finger protein 182##NM_001251901|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule	0.0	
chr11	72864067	72864228	reg1032788.p1	4.116	+	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	-11098	-	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-338665	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-338742	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	65197	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	65299	+	AK313942 TSC_hg19_v1_chr11_+_72929608	65469	+	AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.0	
chr14	71128262	71128387	reg1032616.p2	4.116	+	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	-19715	+	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	-60947	-	AB463868 BT006831 CR541697 TSC_hg19_v1_chr14_-_71067367	-60964	-	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	147485	-	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	245809	+	TSC_hg19_v1_chr14_+_71374441 BC140784	246127	+	D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9##AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##BT006831|MED6|10001|mediator complex subunit 6##CR541697|MED6|10001|mediator complex subunit 6##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##BC140784|PCNX|22990|pecanex homolog (Drosophila)	0.023396	
chr16	10936919	10937006	reg1027971.p1	4.116	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	-24414	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-99258	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-148197	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	34150	+	BC071683 TSC_hg19_v1_chr16_-_11036171	99204	-	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	99273	-	BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)	0.063851	
chr18	74766925	74767036	reg1016160.p1	4.116	+	TSC_hg19_v1_chr18_-_74729052 AK314553 NM_001025081 NM_001025090 NM_001025092 NM_002385 AK293922	-37913	-	CR536534 CR541919 TSC_hg19_v1_chr18_-_74729012 AK296492 M30515 M30516 BC008749 BC101771 BC101773 BC143348 BC143350 M30047 BC080654 M13577 AK289893 AK098402 AK128788 CR627018 AK128770 BC068550	-37985	-	AK074315 TSC_hg19_v1_chr18_-_74728814	-38224	-	TSC_hg19_v1_chr18_-_74844720 BC065248 AB208986 L18865	77737	-	TSC_hg19_v1_chr18_-_74844774 NM_001025100 NM_001025101	77799	-	TSC_hg19_v1_chr18_+_74961925 NM_001480	194986	+	AK314553|MBP|4155|myelin basic protein##NM_001025081|MBP|4155|myelin basic protein##NM_001025090|MBP|4155|myelin basic protein##NM_001025092|MBP|4155|myelin basic protein##NM_002385|MBP|4155|myelin basic protein##AK293922|MBP|4155|myelin basic protein##CR536534|MBP|4155|myelin basic protein##CR541919|MBP|4155|myelin basic protein##M30515|MBP|4155|myelin basic protein##M30516|MBP|4155|myelin basic protein##BC008749|MBP|4155|myelin basic protein##BC101771|MBP|4155|myelin basic protein##BC101773|MBP|4155|myelin basic protein##BC143348|MBP|4155|myelin basic protein##BC143350|MBP|4155|myelin basic protein##M30047|MBP|4155|myelin basic protein##BC080654|MBP|4155|myelin basic protein##M13577|MBP|4155|myelin basic protein##AK289893|MBP|4155|myelin basic protein##AK098402|MBP|4155|myelin basic protein##AK128788|MBP|4155|myelin basic protein##CR627018|MBP|4155|myelin basic protein##AK128770|MBP|4155|myelin basic protein##BC068550|MBP|4155|myelin basic protein##AK074315|MBP|4155|myelin basic protein##BC065248|MBP|4155|myelin basic protein##AB208986|MBP|4155|myelin basic protein##L18865|MBP|4155|myelin basic protein##NM_001025100|MBP|4155|myelin basic protein##NM_001025101|MBP|4155|myelin basic protein##NM_001480|GALR1|2587|galanin receptor 1	0.0	
chr19	7770642	7770769	reg1028268.p1	4.116	+	BC064417 BC062591 AK223207 BC014108 M14766 TSC_hg19_v1_chr19_-_7767004 AK310707 AK310071 M15059 NM_001220500 NM_002002 X04772	-3701	-	TSC_hg19_v1_chr19_-_7764328 NM_001207019	-6379	-	TSC_hg19_v1_chr19_+_7745742 BC042161 NM_174894 NM_001042461 BC022836	-24950	+	AY203939 BC093691 BC093693 BC143309 AY423706 NM_001244856 NM_198492	26311	-	AY042221 AY042222 AY042223 AY042224 AY042225 AY042226 AY042227 AY042228 AY042229 AY042230 AY042231 AY042232 AY042233 AB527563 BC110615 AF290886 AK293089 TSC_hg19_v1_chr19_-_7812421 M98457 AK304190 AK313585 NM_001144893 NM_001144894 NM_001144895 NM_001144896 NM_001144897 NM_001144899 NM_021155	41724	-	NM_001144904 NM_001144905 NM_001144906 NM_001144907 NM_001144908 NM_001144909 NM_001144910 NM_001144911 NM_014257 AK292278 BC038851 AF290887 AK304499 AK314704 AB015629 AF245219 AK298084 AK023750 BC110614 AY343913 DQ893779 AY042234 AY042235 AY042236 AY042237 AY042238 AY042239 AY042240	57388	+	BC064417|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC062591|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK223207|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC014108|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M14766|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310707|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310071|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M15059|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_001220500|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_002002|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##X04772|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_001207019|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC042161|TRAPPC5|126003|trafficking protein particle complex 5##NM_174894|TRAPPC5|126003|trafficking protein particle complex 5##NM_001042461|TRAPPC5|126003|trafficking protein particle complex 5##BC022836|TRAPPC5|126003|trafficking protein particle complex 5##AY203939|CLEC4G|339390|C-type lectin domain family 4, member G##BC093691|CLEC4G|339390|C-type lectin domain family 4, member G##BC093693|CLEC4G|339390|C-type lectin domain family 4, member G##BC143309|CLEC4G|339390|C-type lectin domain family 4, member G##AY423706|CLEC4G|339390|C-type lectin domain family 4, member G##NM_001244856|CLEC4G|339390|C-type lectin domain family 4, member G##NM_198492|CLEC4G|339390|C-type lectin domain family 4, member G##AY042221|CD209|30835|CD209 molecule##AY042222|CD209|30835|CD209 molecule##AY042223|CD209|30835|CD209 molecule##AY042224|CD209|30835|CD209 molecule##AY042225|CD209|30835|CD209 molecule##AY042226|CD209|30835|CD209 molecule##AY042227|CD209|30835|CD209 molecule##AY042228|CD209|30835|CD209 molecule##AY042229|CD209|30835|CD209 molecule##AY042230|CD209|30835|CD209 molecule##AY042231|CD209|30835|CD209 molecule##AY042232|CD209|30835|CD209 molecule##AY042233|CD209|30835|CD209 molecule##BC110615|CD209|30835|CD209 molecule##AF290886|CD209|30835|CD209 molecule##AK293089|CD209|30835|CD209 molecule##M98457|CD209|30835|CD209 molecule##AK304190|CD209|30835|CD209 molecule##AK313585|CD209|30835|CD209 molecule##NM_001144893|CD209|30835|CD209 molecule##NM_001144894|CD209|30835|CD209 molecule##NM_001144895|CD209|30835|CD209 molecule##NM_001144896|CD209|30835|CD209 molecule##NM_001144897|CD209|30835|CD209 molecule##NM_001144899|CD209|30835|CD209 molecule##NM_021155|CD209|30835|CD209 molecule##NM_001144904|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144905|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144906|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144907|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144908|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144909|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144910|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144911|CLEC4M|10332|C-type lectin domain family 4, member M##NM_014257|CLEC4M|10332|C-type lectin domain family 4, member M##AK292278|CLEC4M|10332|C-type lectin domain family 4, member M##BC038851|CLEC4M|10332|C-type lectin domain family 4, member M##AF290887|CLEC4M|10332|C-type lectin domain family 4, member M##AK304499|CLEC4M|10332|C-type lectin domain family 4, member M##AK314704|CLEC4M|10332|C-type lectin domain family 4, member M##AB015629|CLEC4M|10332|C-type lectin domain family 4, member M##AF245219|CLEC4M|10332|C-type lectin domain family 4, member M##AK298084|CLEC4M|10332|C-type lectin domain family 4, member M##AK023750|CLEC4M|10332|C-type lectin domain family 4, member M##BC110614|CLEC4M|10332|C-type lectin domain family 4, member M##AY343913|CLEC4M|10332|C-type lectin domain family 4, member M##DQ893779|CLEC4M|10332|C-type lectin domain family 4, member M##AY042234|CLEC4M|10332|C-type lectin domain family 4, member M##AY042235|CLEC4M|10332|C-type lectin domain family 4, member M##AY042236|CLEC4M|10332|C-type lectin domain family 4, member M##AY042237|CLEC4M|10332|C-type lectin domain family 4, member M##AY042238|CLEC4M|10332|C-type lectin domain family 4, member M##AY042239|CLEC4M|10332|C-type lectin domain family 4, member M##AY042240|CLEC4M|10332|C-type lectin domain family 4, member M	0.0	
chr20	60716926	60717043	reg1031785.p2	4.116	+	TSC_hg19_v1_chr20_+_60697578 CU691202	-19340	+	TSC_hg19_v1_chr20_+_60697530 BC057387 NM_144703 BC035702	-19470	+	U75308 NM_003185 Y11354 TSC_hg19_v1_chr20_-_60640882	-76105	-	BT007165 AB528335 DQ890589 DQ893754 AF022815 TSC_hg19_v1_chr20_-_60718388	1390	-	TSC_hg19_v1_chr20_-_60718410 AK312025 BC004427	1438	-	TSC_hg19_v1_chr20_-_60718451 BC014999 AF054185 BC001895 NM_002792	1490	-	BC057387|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##NM_144703|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##BC035702|LSM14B|149986|LSM14B, SCD6 homolog B (S. cerevisiae)##U75308|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##NM_003185|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##Y11354|TAF4|6874|TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa##BT007165|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##DQ890589|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##DQ893754|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##AF022815|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##AK312025|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##BC004427|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##BC014999|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##AF054185|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##BC001895|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7##NM_002792|PSMA7|5688|proteasome (prosome, macropain) subunit, alpha type, 7	0.0	
chr2	30440504	30440682	reg1035006.p1	4.116	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-70717	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	-70760	+	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	-70823	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	13909	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	229555	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	589700	-	AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13	0.05962	
chr5	158312363	158312430	reg1030034.p2	4.116	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1026306	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-1128016	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-1141656	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	214061	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	214346	-	AK304228 NM_001199382	322252	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.0	
chr6	136259913	136259995	reg1028074.p2	4.116	+	AK290582 AB038040 NM_018945 TSC_hg19_v1_chr6_+_136172838 AJ251860 BC070267	-87103	+	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	-440990	+	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	-441069	-	TSC_hg19_v1_chr6_-_136571414 AK292303 BC063688 AK125758 NM_001099286 NM_138419	311475	-	BC078160 BC063846 TSC_hg19_v1_chr6_-_136610926 BX649160 BC016682	350956	-	BC132780 BC144281 BC144282 BC144299 TSC_hg19_v1_chr6_-_136610938 BC047887 BC056894 D79986 NM_001077440 NM_001077441 NM_014739	351006	-	AK290582|PDE7B|27115|phosphodiesterase 7B##AB038040|PDE7B|27115|phosphodiesterase 7B##NM_018945|PDE7B|27115|phosphodiesterase 7B##AJ251860|PDE7B|27115|phosphodiesterase 7B##BC070267|PDE7B|27115|phosphodiesterase 7B##BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##AK292303|FAM54A|113115|family with sequence similarity 54, member A##BC063688|FAM54A|113115|family with sequence similarity 54, member A##AK125758|FAM54A|113115|family with sequence similarity 54, member A##NM_001099286|FAM54A|113115|family with sequence similarity 54, member A##NM_138419|FAM54A|113115|family with sequence similarity 54, member A##BC078160|BCLAF1|9774|BCL2-associated transcription factor 1##BC063846|BCLAF1|9774|BCL2-associated transcription factor 1##BX649160|BCLAF1|9774|BCL2-associated transcription factor 1##BC016682|BCLAF1|9774|BCL2-associated transcription factor 1##BC132780|BCLAF1|9774|BCL2-associated transcription factor 1##BC144281|BCLAF1|9774|BCL2-associated transcription factor 1##BC144282|BCLAF1|9774|BCL2-associated transcription factor 1##BC144299|BCLAF1|9774|BCL2-associated transcription factor 1##BC047887|BCLAF1|9774|BCL2-associated transcription factor 1##BC056894|BCLAF1|9774|BCL2-associated transcription factor 1##D79986|BCLAF1|9774|BCL2-associated transcription factor 1##NM_001077440|BCLAF1|9774|BCL2-associated transcription factor 1##NM_001077441|BCLAF1|9774|BCL2-associated transcription factor 1##NM_014739|BCLAF1|9774|BCL2-associated transcription factor 1	0.957103	CTCF.p2:-2:0.957
chr7	142362062	142362161	reg1034192.p1	4.116	+	AY358487 BC035384 AK122940 NM_001001317	-404250	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-550572	+	AF016833 NM_004668 BC120872	-666419	+	NM_001190487	12019	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	95215	+	M12426 TSC_hg19_v1_chr7_+_142495248	133084	+	AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	0.976552	CTCF.p2:-14:0.977
chr7	47219805	47219874	reg1006379.p1	4.116	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-1259033	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-1286705	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-1291734	+	TSC_hg19_v1_chr7_-_47579207 BC071791	359370	-	TSC_hg19_v1_chr7_-_47621681 CR749644	401824	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	401944	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.027592	
chr11	70023555	70023661	reg1029755.p2	4.115	+	AY728143 NM_018043 TSC_hg19_v1_chr11_+_69924473	-99168	+	NM_005247	-389417	-	M17446 NM_002007	-433438	-	NM_003824 TSC_hg19_v1_chr11_+_70049420 AK291005 AK293320 BC000334 X84709 U24231 BC025733 EU176185 AB587588 AY423721 BT006927 CR456738	25808	+	TSC_hg19_v1_chr11_+_70116795 NM_003626 NM_177423	93196	+	TSC_hg19_v1_chr11_+_70116841 BC034046 AB209314	93253	+	AY728143|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_018043|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_005247|FGF3|2248|fibroblast growth factor 3##M17446|FGF4|2249|fibroblast growth factor 4##NM_002007|FGF4|2249|fibroblast growth factor 4##NM_003824|FADD|8772|Fas (TNFRSF6)-associated via death domain##AK291005|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC000334|FADD|8772|Fas (TNFRSF6)-associated via death domain##X84709|FADD|8772|Fas (TNFRSF6)-associated via death domain##U24231|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC025733|FADD|8772|Fas (TNFRSF6)-associated via death domain##EU176185|FADD|8772|Fas (TNFRSF6)-associated via death domain##AY423721|FADD|8772|Fas (TNFRSF6)-associated via death domain##BT006927|FADD|8772|Fas (TNFRSF6)-associated via death domain##CR456738|FADD|8772|Fas (TNFRSF6)-associated via death domain##NM_003626|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##NM_177423|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##BC034046|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##AB209314|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1	0.991695	CTCF.p2:-8:0.992
chr12	125401761	125401884	reg1032380.p1	4.115	+	NM_021009	-2236	-	AY732488 AY819759 BC008955 BC080583 AB209782 BC000449 AK056939 AK098827 AK129749 AK291539 BC039193 BC093445 AB009010 TSC_hg19_v1_chr12_-_125399197 AK026846	-2649	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	-53349	-	TSC_hg19_v1_chr12_-_125473644 BC037964 NM_032656	71822	-	TSC_hg19_v1_chr12_+_125478217 NM_080626 BC034525	76368	+	TSC_hg19_v1_chr12_+_125478249 AF284094	76438	+	NM_021009|UBC|7316|ubiquitin C##AY732488|UBC|7316|ubiquitin C##AY819759|UBC|7316|ubiquitin C##BC008955|UBC|7316|ubiquitin C##BC080583|UBC|7316|ubiquitin C##AB209782|UBC|7316|ubiquitin C##BC000449|UBC|7316|ubiquitin C##AK056939|UBC|7316|ubiquitin C##AK098827|UBC|7316|ubiquitin C##AK129749|UBC|7316|ubiquitin C##AK291539|UBC|7316|ubiquitin C##BC039193|UBC|7316|ubiquitin C##BC093445|UBC|7316|ubiquitin C##AB009010|UBC|7316|ubiquitin C##AK026846|UBC|7316|ubiquitin C##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1##BC037964|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37##NM_032656|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37##NM_080626|BRI3BP|140707|BRI3 binding protein##BC034525|BRI3BP|140707|BRI3 binding protein##AF284094|BRI3BP|140707|BRI3 binding protein	0.0	
chr1	230204758	230204938	reg1030173.p2	4.115	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-1852	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-1906	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-442834	+	BC150638 NM_024554	308542	-	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	573348	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	573385	+	AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2	0.010047	
chr12	90006297	90006386	reg1033480.p2	4.115	+	AK297677 NM_001199781 NM_001199782 NM_172240	-86303	-	CU693124 TSC_hg19_v1_chr12_-_89919778 BX647258 AK074772 AK295596 BC026080 EF011619	-86581	-	TSC_hg19_v1_chr12_-_89919208 AK123106 NM_001199777	-87079	-	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	43510	-	TSC_hg19_v1_chr12_+_90102640 BC040326	96346	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	97204	+	AK297677|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199781|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199782|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_172240|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BX647258|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##AK074772|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK295596|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BC026080|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##EF011619|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK123106|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##NM_001199777|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC040326|LOC338758|338758|uncharacterized LOC338758##BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758	0.0	
chr14	105646926	105647088	reg1033050.p2	4.115	+	TSC_hg19_v1_chr14_-_105635114 AF029778 AF029779 NM_002226 NM_145159	-11870	-	Y14330 AF003521 AF020201 TSC_hg19_v1_chr14_-_105634835 BC032053	-12216	-	TSC_hg19_v1_chr14_-_105531768 AB465599 AB465600 AK292142 AK303654 AX775935 AX775841	-115234	-	TSC_hg19_v1_chr14_-_105647650 AB087802 HQ257983 BC041584 AK128196 AK310449 NM_177533	587	-	AJ297407 NM_145685	67214	-	TSC_hg19_v1_chr14_+_105714874 NM_033271	67858	+	AF029778|JAG2|3714|jagged 2##AF029779|JAG2|3714|jagged 2##NM_002226|JAG2|3714|jagged 2##NM_145159|JAG2|3714|jagged 2##Y14330|JAG2|3714|jagged 2##AF003521|JAG2|3714|jagged 2##AF020201|JAG2|3714|jagged 2##BC032053|JAG2|3714|jagged 2##AB465599|GPR132|29933|G protein-coupled receptor 132##AB465600|GPR132|29933|G protein-coupled receptor 132##AK292142|GPR132|29933|G protein-coupled receptor 132##AK303654|GPR132|29933|G protein-coupled receptor 132##AX775935|GPR132|29933|G protein-coupled receptor 132##AX775841|GPR132|29933|G protein-coupled receptor 132##AB087802|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##HQ257983|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##BC041584|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AK128196|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##NM_177533|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AJ297407|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_145685|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_033271|BTBD6|90135|BTB (POZ) domain containing 6	0.0	
chr15	32739556	32739638	reg1029523.p1	4.115	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-416854	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-576654	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-576768	-	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	168165	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	194317	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	270660	+	AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1	0.864445	CTCF.p2:5:0.836
chr16	85260843	85260968	reg1031745.p1	4.115	+	BC093665 BC111944 AK126284 NM_198491	-114851	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-199535	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-215776	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	384116	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	386048	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	461637	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.0	
chr17	27224795	27224975	reg1032111.p4	4.115	+	TSC_hg19_v1_chr17_-_27224717 NM_004475	-173	-	M60922 CU678570 AB528533 BC003683 TSC_hg19_v1_chr17_-_27224641	-277	-	TSC_hg19_v1_chr17_+_27182033 AB049388 AK023342 AY007435 BX537542 BC019094 NM_005702 CU676380 DQ892626 DQ895866 AF082657 AF082658	-42862	+	AX795344 TSC_hg19_v1_chr17_-_27229986 AX795345 AX795340 AX795338 AX795342 BC015582 AX795337 AX795341 AX795339 AX795335 AX795336 AK296017 AX795346 AX795343 AY358566 NM_144683	5120	-	TSC_hg19_v1_chr17_-_27240983 AK024290	16128	-	BC110882 TSC_hg19_v1_chr17_-_27278336	53445	-	NM_004475|FLOT2|2319|flotillin 2##M60922|FLOT2|2319|flotillin 2##BC003683|FLOT2|2319|flotillin 2##AB049388|ERAL1|26284|Era G-protein-like 1 (E. coli)##AK023342|ERAL1|26284|Era G-protein-like 1 (E. coli)##AY007435|ERAL1|26284|Era G-protein-like 1 (E. coli)##BX537542|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC019094|ERAL1|26284|Era G-protein-like 1 (E. coli)##NM_005702|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ892626|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ895866|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082657|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082658|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC015582|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AK296017|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AY358566|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##NM_144683|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AK024290|PHF12|57649|PHD finger protein 12##BC110882|PHF12|57649|PHD finger protein 12	0.0	
chr21	47643653	47643775	reg1032768.p1	4.115	+	TSC_hg19_v1_chr21_-_47604362 AK309847 AK304535 NM_001142854 NM_032261	-39339	-	TSC_hg19_v1_chr21_-_47604340 BC084577	-39368	-	AL136871 TSC_hg19_v1_chr21_-_47604330	-39398	-	X87809 TSC_hg19_v1_chr21_-_47648594	4791	-	TSC_hg19_v1_chr21_-_47648618 AK226141 CU690148 DQ891234 DQ894418	4928	-	TSC_hg19_v1_chr21_-_47648679 D63807 S81221 BC035638	4963	-	AK309847|C21orf56|84221|chromosome 21 open reading frame 56##AK304535|C21orf56|84221|chromosome 21 open reading frame 56##NM_001142854|C21orf56|84221|chromosome 21 open reading frame 56##NM_032261|C21orf56|84221|chromosome 21 open reading frame 56##BC084577|C21orf56|84221|chromosome 21 open reading frame 56##AL136871|C21orf56|84221|chromosome 21 open reading frame 56##X87809|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##AK226141|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##DQ891234|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##DQ894418|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##D63807|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##S81221|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)##BC035638|LSS|4047|lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase)	0.0	
chr3	121793571	121793752	reg1027458.p1	4.115	+	NM_001206924 NM_001206925 NM_175862 AK294663 AK301237 AK316203 BC040261 L25259 AK291497 AK313103	-19407	+	AY672837 AY672839 BC044240 AY134857 TSC_hg19_v1_chr3_-_121741095 AK129974 NM_001199799 NM_001199800 NM_175924	-52614	-	NM_001145998 NM_021082 AK289820 AK296895 AK302002 AK304189 BC020743 BC044572 BC038445 S78203	-180429	+	NM_006889 NM_176892 U04343	3061	+	NM_000388 U20759	108868	+	NM_001178065 U20760	109519	+	NM_001206924|CD86|942|CD86 molecule##NM_001206925|CD86|942|CD86 molecule##NM_175862|CD86|942|CD86 molecule##AK294663|CD86|942|CD86 molecule##AK301237|CD86|942|CD86 molecule##AK316203|CD86|942|CD86 molecule##BC040261|CD86|942|CD86 molecule##L25259|CD86|942|CD86 molecule##AK291497|CD86|942|CD86 molecule##AK313103|CD86|942|CD86 molecule##AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1##BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199799|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199800|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001145998|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##NM_021082|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK289820|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK296895|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK302002|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK304189|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC020743|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC044572|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC038445|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##S78203|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule##NM_000388|CASR|846|calcium-sensing receptor##U20759|CASR|846|calcium-sensing receptor##NM_001178065|CASR|846|calcium-sensing receptor##U20760|CASR|846|calcium-sensing receptor	0.0	
chr4	14127110	14127290	reg1031349.p1	4.115	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-497883	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-577786	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-581125	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	876509	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	876795	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	877097	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.0	
chr7	47226053	47226229	reg1031082.p2	4.115	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-1265335	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-1293007	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-1298036	+	TSC_hg19_v1_chr7_-_47579207 BC071791	353068	-	TSC_hg19_v1_chr7_-_47621681 CR749644	395522	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	395642	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.0	
chr8	70699194	70699328	reg1037632.p1	4.115	+	AY101175 TSC_hg19_v1_chr8_+_70405081 AK055607 BX571746	-294172	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	-294222	+	TSC_hg19_v1_chr8_+_70379077 AK307951	-320181	+	BC137424 BC144618 NM_001146009	46142	-	AK022760 NM_001146008	46363	-	AK308488 AF205075 AK096879 NM_030958	47988	-	AY101175|SULF1|23213|sulfatase 1##AK055607|SULF1|23213|sulfatase 1##BX571746|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##BC137424|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC144618|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146009|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK022760|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_001146008|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1	0.632854	CTCF.p2:15:0.633
chr10	99447338	99447518	reg1028768.p4	4.114	+	TSC_hg19_v1_chr10_-_99446983 AK223099 AF218019 AK024533 AK222493 AF131791 NM_021732 AF241786 AY505173	-399	-	TSC_hg19_v1_chr10_+_99400490 BC003167 DQ893537 DQ893758 BT007330	-46944	+	TSC_hg19_v1_chr10_+_99400444 AJ303098 NM_018425	-46986	+	TSC_hg19_v1_chr10_+_99473461 NM_031484	26036	+	BC062544 BC004995 TSC_hg19_v1_chr10_+_99473485 AF325259	26053	+	TSC_hg19_v1_chr10_+_99496884 AK296295 NM_001002262 NM_001174119 NM_001174120 NM_001174121 NM_001174122 NM_144588 AK057481 AK097945 AK299735 AK300438 BC030621	49440	+	AK223099|AVPI1|60370|arginine vasopressin-induced 1##AF218019|AVPI1|60370|arginine vasopressin-induced 1##AK024533|AVPI1|60370|arginine vasopressin-induced 1##AK222493|AVPI1|60370|arginine vasopressin-induced 1##AF131791|AVPI1|60370|arginine vasopressin-induced 1##NM_021732|AVPI1|60370|arginine vasopressin-induced 1##AF241786|AVPI1|60370|arginine vasopressin-induced 1##BC003167|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##DQ893537|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##DQ893758|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##BT007330|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##AJ303098|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##NM_018425|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##NM_031484|MARVELD1|83742|MARVEL domain containing 1##BC062544|MARVELD1|83742|MARVEL domain containing 1##BC004995|MARVELD1|83742|MARVEL domain containing 1##AF325259|MARVELD1|83742|MARVEL domain containing 1##AK296295|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001002262|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174119|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174120|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174121|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174122|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_144588|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK057481|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK097945|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK299735|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK300438|ZFYVE27|118813|zinc finger, FYVE domain containing 27##BC030621|ZFYVE27|118813|zinc finger, FYVE domain containing 27	0.0	
chr11	63334877	63335057	reg1029512.p2	4.114	+	AK000563 NM_017878	-4113	-	NM_004585 AF092922 AK293357 AK312110 BC009678 AF060228 AB030815 AK123723	-30673	+	AF244975 AF244977 NM_001142537 NM_001142538	-59509	+	AB439591 AB528317 DQ892568 DQ895783 AB030814 AF317086 AX775893 BC103807 BC103808 TSC_hg19_v1_chr11_-_63381778	46664	-	BC001387 TSC_hg19_v1_chr11_-_63381880 X92814	46901	-	AK313075 NM_007069 TSC_hg19_v1_chr11_-_63381909	46942	-	AK000563|HRASLS2|54979|HRAS-like suppressor 2##NM_017878|HRASLS2|54979|HRAS-like suppressor 2##NM_004585|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF092922|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AK293357|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AK312110|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##BC009678|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF060228|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AB030815|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF244975|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AF244977|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142537|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142538|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AB439591|PLA2G16|11145|phospholipase A2, group XVI##DQ892568|PLA2G16|11145|phospholipase A2, group XVI##DQ895783|PLA2G16|11145|phospholipase A2, group XVI##AB030814|PLA2G16|11145|phospholipase A2, group XVI##AF317086|PLA2G16|11145|phospholipase A2, group XVI##BC103807|PLA2G16|11145|phospholipase A2, group XVI##BC103808|PLA2G16|11145|phospholipase A2, group XVI##BC001387|PLA2G16|11145|phospholipase A2, group XVI##X92814|PLA2G16|11145|phospholipase A2, group XVI##AK313075|PLA2G16|11145|phospholipase A2, group XVI##NM_007069|PLA2G16|11145|phospholipase A2, group XVI	0.0	
chr11	75949070	75949206	reg1032275.p1	4.114	+	TSC_hg19_v1_chr11_-_75921806 AK075540	-27334	-	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	-31626	-	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	-422860	+	TSC_hg19_v1_chr11_-_76091995 AB590785 AF007393 AF081567 HQ258648 NM_004705 AK291843 BC117138 BC117140 BC110304	142870	-	TSC_hg19_v1_chr11_+_76092383 AK125821 BC040665 AK095089	143285	+	TSC_hg19_v1_chr11_-_76155721 AK054718	206587	-	AK075540|WNT11|7481|wingless-type MMTV integration site family, member 11##BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11##BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	0.714036	CTCF.p2:25:0.714
chr15	75336210	75336369	reg1002775.p4	4.114	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-20308	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-20361	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-48382	+	AK128205 TSC_hg19_v1_chr15_+_75491259	154957	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	157923	+	BC110367 TSC_hg19_v1_chr15_+_75494233	157944	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chr3	189272522	189272605	reg1033002.p1	4.114	+	AK125682 NM_198485 BC101550 BC101552	-382752	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-607593	+	NM_001167671 BC130584 BC144076	-1329329	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	76696	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	234955	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	566132	-	AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1	0.134474	
chrX	103072428	103072565	reg1013039.p1	4.114	+	AK312340 TSC_hg19_v1_chrX_+_103031844 AK128782 AK295374 AK295388 M54927 M27110 BC095452	-40675	+	NM_000533 NM_199478 TSC_hg19_v1_chrX_+_103031767 BC002665	-40731	+	AK292728 NM_001128834	-41061	+	AK313425 TSC_hg19_v1_chrX_-_103087160 AB036693 BC041336 BC070069 BC018033 NM_016370	14680	-	TSC_hg19_v1_chrX_-_103174133 AK026512	101638	-	TSC_hg19_v1_chrX_+_103217225 BC093093 NM_194324 BC028039 BC054476 AK291479 BC029803 BC035660	144720	+	AK312340|PLP1|5354|proteolipid protein 1##AK128782|PLP1|5354|proteolipid protein 1##AK295374|PLP1|5354|proteolipid protein 1##AK295388|PLP1|5354|proteolipid protein 1##M54927|PLP1|5354|proteolipid protein 1##M27110|PLP1|5354|proteolipid protein 1##BC095452|PLP1|5354|proteolipid protein 1##NM_000533|PLP1|5354|proteolipid protein 1##NM_199478|PLP1|5354|proteolipid protein 1##BC002665|PLP1|5354|proteolipid protein 1##AK292728|PLP1|5354|proteolipid protein 1##NM_001128834|PLP1|5354|proteolipid protein 1##AK313425|RAB9B|51209|RAB9B, member RAS oncogene family##AB036693|RAB9B|51209|RAB9B, member RAS oncogene family##BC041336|RAB9B|51209|RAB9B, member RAS oncogene family##BC070069|RAB9B|51209|RAB9B, member RAS oncogene family##NM_016370|RAB9B|51209|RAB9B, member RAS oncogene family##AK026512|LOC100128594|100128594|uncharacterized LOC100128594##BC093093|TMSB15B|286527|thymosin beta 15B##NM_194324|TMSB15B|286527|thymosin beta 15B##BC054476|TMSB15B|286527|thymosin beta 15B##AK291479|TMSB15B|286527|thymosin beta 15B##BC029803|TMSB15B|286527|thymosin beta 15B##BC035660|TMSB15B|286527|thymosin beta 15B	0.0	
chr10	125162236	125162416	reg1033438.p1	4.113	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-247970	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-248380	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-248428	+	AJ505757 NM_153442 BC112011 BC113462	263551	+	BC137492 BC146862 AY358565 NM_198148	489170	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	689573	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.0	
chr10	34816104	34816205	reg1030225.p2	4.113	+	TSC_hg19_v1_chr10_-_33623996 BX648025	-1192156	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1192340	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	-1192701	-	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	287997	-	AK310225 AK300491 NM_001198778 NM_001198779	547058	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	563118	-	BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2	0.041026	
chr1	109583414	109583578	reg1032783.p2	4.113	+	TSC_hg19_v1_chr1_-_109506107 AK090563 AX746511 BC002939 AK293786 NM_001048210 NM_015127	-77419	-	TSC_hg19_v1_chr1_+_109419783 AK295563 BC027732	-163709	+	TSC_hg19_v1_chr1_+_109419606 AB445462 NM_013296 AK314249	-163885	+	TSC_hg19_v1_chr1_-_109584725 AK225781 AB020700 AK289789 BC039254 BC034964 NM_001142550 NM_001142551 NM_014969	1223	-	AB587451 TSC_hg19_v1_chr1_-_109618626 X84003 BC017821 BC121180 BC121181 AK312158 NM_005645	35105	-	BC066918 AK075191 TSC_hg19_v1_chr1_+_109633380 AF164793 AK310192 BC008739 BC065186 NM_020141 AK291293 BC067116	49898	+	AK090563|CLCC1|23155|chloride channel CLIC-like 1##BC002939|CLCC1|23155|chloride channel CLIC-like 1##AK293786|AKNAD1|254268|AKNA domain containing 1##NM_001048210|CLCC1|23155|chloride channel CLIC-like 1##NM_015127|CLCC1|23155|chloride channel CLIC-like 1##AK295563|GPSM2|29899|G-protein signaling modulator 2##BC027732|GPSM2|29899|G-protein signaling modulator 2##AB445462|GPSM2|29899|G-protein signaling modulator 2##NM_013296|GPSM2|29899|G-protein signaling modulator 2##AK314249|GPSM2|29899|G-protein signaling modulator 2##AK225781|WDR47|22911|WD repeat domain 47##AB020700|WDR47|22911|WD repeat domain 47##AK289789|WDR47|22911|WD repeat domain 47##BC039254|WDR47|22911|WD repeat domain 47##BC034964|WDR47|22911|WD repeat domain 47##NM_001142550|WDR47|22911|WD repeat domain 47##NM_001142551|WDR47|22911|WD repeat domain 47##NM_014969|WDR47|22911|WD repeat domain 47##X84003|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC121180|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC121181|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##AK312158|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##NM_005645|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC066918|TMEM167B|56900|transmembrane protein 167B##AK075191|TMEM167B|56900|transmembrane protein 167B##AF164793|TMEM167B|56900|transmembrane protein 167B##AK310192|TMEM167B|56900|transmembrane protein 167B##BC008739|TMEM167B|56900|transmembrane protein 167B##BC065186|TMEM167B|56900|transmembrane protein 167B##NM_020141|TMEM167B|56900|transmembrane protein 167B##AK291293|TMEM167B|56900|transmembrane protein 167B##BC067116|TMEM167B|56900|transmembrane protein 167B	0.0	
chr1	186294499	186294619	reg1034038.p1	4.113	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	-29152	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	-590983	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-1008089	-	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	49698	-	BC016514 TSC_hg19_v1_chr1_-_186344361	49786	-	TSC_hg19_v1_chr1_-_186344387 BC094764	49826	-	NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)##BC016514|TPR|7175|translocated promoter region (to activated MET oncogene)##BC094764|TPR|7175|translocated promoter region (to activated MET oncogene)	0.080878	
chr1	193000661	193000771	reg1037216.p2	4.113	+	BC042755 BC044742 NM_002923 TSC_hg19_v1_chr1_+_192778168 AK313668 BC007049 L13463 AY971351 AB528517 AF493926 BT007065 CR457410 CU675517 DQ893178 DQ896478	-222532	+	NM_002927 NM_144766 AF030107 BC016667	-395432	+	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	-455808	+	BT006790 CU692976 AB528990 AF151828 AK225794 BC015521 TSC_hg19_v1_chr1_-_193028470 AK314445 AK316064 AK024751	27721	-	BC025369 TSC_hg19_v1_chr1_-_193028505 AK296487 AF147717 NM_001199261 NM_001199262 NM_001199263 NM_015984	27790	-	TSC_hg19_v1_chr1_-_193028528 AF157320	27815	-	BC042755|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC044742|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002923|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AK313668|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC007049|RGS2|5997|regulator of G-protein signaling 2, 24kDa##L13463|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AY971351|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AF493926|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT007065|RGS2|5997|regulator of G-protein signaling 2, 24kDa##CR457410|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ893178|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ896478|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002927|RGS13|6003|regulator of G-protein signaling 13##NM_144766|RGS13|6003|regulator of G-protein signaling 13##AF030107|RGS13|6003|regulator of G-protein signaling 13##BC016667|RGS13|6003|regulator of G-protein signaling 13##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1##BT006790|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AF151828|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK225794|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##BC015521|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK314445|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK316064|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK024751|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##BC025369|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AK296487|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AF147717|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##NM_001199261|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##NM_001199262|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##NM_001199263|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##NM_015984|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5##AF157320|UCHL5|51377|ubiquitin carboxyl-terminal hydrolase L5	0.981578	CTCF.p2:9:0.982
chr1	23926935	23927083	reg1031366.p2	4.113	+	NM_002167 X69111	-40725	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	-41025	-	L22846 NM_004091	-69298	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	91271	+	TSC_hg19_v1_chr1_+_24018295 BC018970	91290	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	142895	+	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11##BC018970|RPL11|6135|ribosomal protein L11##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)	0.0	
chr13	31250931	31251036	reg1034204.p1	4.113	+	NM_005800 BC038103 TSC_hg19_v1_chr13_+_31192056 BC036027 AK289826 CR627370 X59131 BC012594 AL832776	-59020	+	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	-59356	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	-210925	-	AK314143 NM_001204406	36631	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	58681	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	58732	+	NM_005800|USPL1|10208|ubiquitin specific peptidase like 1##BC038103|USPL1|10208|ubiquitin specific peptidase like 1##BC036027|USPL1|10208|ubiquitin specific peptidase like 1##AK289826|USPL1|10208|ubiquitin specific peptidase like 1##CR627370|USPL1|10208|ubiquitin specific peptidase like 1##X59131|USPL1|10208|ubiquitin specific peptidase like 1##BC012594|USPL1|10208|ubiquitin specific peptidase like 1##AL832776|USPL1|10208|ubiquitin specific peptidase like 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein	0.0	
chr19	51698151	51698304	reg1033478.p2	4.113	+	TSC_hg19_v1_chr19_+_51645559 NM_014385 NM_016543 AK314875 AF193441 BC028150 AJ007395 AF178981 AF170485 AJ130710 AJ130711 AJ130712 AJ130713	-52636	+	NM_001198558 NM_014441 AF227924 AK297043 BC035365 AB026265 AY358913 AK315272 AF247180 DQ892476 DQ895688	-70008	+	TSC_hg19_v1_chr19_-_51611637 AK291173 NM_145232	-86586	-	AK293934 TSC_hg19_v1_chr19_+_51728362 NM_001082618 NM_001177608 NM_001772 AK309558 M23197 AY162464	30116	+	BC028152 AK304810 TSC_hg19_v1_chr19_+_51728370 AB590304 DQ891726 DQ894903	30144	+	AK097554 NM_173635	62736	+	NM_014385|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##NM_016543|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AK314875|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF193441|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##BC028150|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ007395|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF178981|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF170485|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130710|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130711|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130712|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130713|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##NM_001198558|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##NM_014441|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AF227924|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK297043|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##BC035365|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AB026265|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AY358913|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK315272|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AF247180|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##DQ892476|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##DQ895688|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK291173|CTU1|90353|cytosolic thiouridylase subunit 1 homolog (S. pombe)##NM_145232|CTU1|90353|cytosolic thiouridylase subunit 1 homolog (S. pombe)##AK293934|CD33|945|CD33 molecule##NM_001082618|CD33|945|CD33 molecule##NM_001177608|CD33|945|CD33 molecule##NM_001772|CD33|945|CD33 molecule##AK309558|CD33|945|CD33 molecule##M23197|CD33|945|CD33 molecule##AY162464|CD33|945|CD33 molecule##BC028152|CD33|945|CD33 molecule##AK304810|CD33|945|CD33 molecule##DQ891726|CD33|945|CD33 molecule##DQ894903|CD33|945|CD33 molecule##AK097554|C19orf75|284369|chromosome 19 open reading frame 75##NM_173635|C19orf75|284369|chromosome 19 open reading frame 75	0.0	
chr20	52634609	52634790	reg1031282.p2	4.113	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-423900	-	AF041259 NM_006526	-435064	-	AK302570 NM_001193421	-832878	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	52363	-	AK315220 NM_003657	52604	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	155821	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr8	11365675	11365822	reg1023903.p1	4.113	+	S76617 NM_001715 BC018703 BC004473 BC038555	-14155	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-41519	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-160744	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	195972	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	261520	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	294436	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.0	
chrX	131427062	131427204	reg1005205.p2	4.113	+	BC035382 TSC_hg19_v1_chrX_-_131353476 AK310997	-73632	-	TSC_hg19_v1_chrX_+_131352259 AK095439	-74706	+	TSC_hg19_v1_chrX_-_131352063 BC051467 AY298955 NM_021183	-75073	-	AY372211 AK002178 NM_001170701 NM_001170702 AK300248 NM_001170703	120452	-	AF491305 EU446986 BC074775 BC074776 AB077698 AB077699 AF467070 AJ427918 AJ427919 AY072692 NM_018388 NM_133486	146544	-	BC042090 NM_001170704 TSC_hg19_v1_chrX_-_131624064	196900	-	BC035382|RAP2C|57826|RAP2C, member of RAS oncogene family##AK310997|RAP2C|57826|RAP2C, member of RAS oncogene family##BC051467|RAP2C|57826|RAP2C, member of RAS oncogene family##AY298955|RAP2C|57826|RAP2C, member of RAS oncogene family##NM_021183|RAP2C|57826|RAP2C, member of RAS oncogene family##AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)##EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)	0.0	
chr10	126407763	126407943	reg1007250.p1	4.112	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-257432	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-269276	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-300335	-	D50930 TSC_hg19_v1_chr10_-_126432660	24791	-	TSC_hg19_v1_chr10_-_126432823 BC031654	24963	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	25058	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.0	
chr11	60590014	60590107	reg1030956.p2	4.112	+	AK122633 NM_206893 BC137259 BC137263	-37215	+	NM_001098835 NM_152717 AK300233 BC031610 AK091846 AX747218 AY584608 AY584609	-65651	+	AF237905 NM_031457 AK310969 AK310884 AK315901 BC022895 AK308413 AF350504 AK310872	-122928	+	NM_024098 TSC_hg19_v1_chr11_+_60609543 AK025974 AK302329 AK123775 BC001378 DQ892603 DQ895844 DQ501251	19461	+	AF144308 AK291371 AK313849 TSC_hg19_v1_chr11_-_60623424 AB008535 NM_004778	33372	-	NM_207341	44954	+	AK122633|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_206893|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137259|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137263|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_001098835|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##NM_152717|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK300233|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##BC031610|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK091846|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584608|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584609|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AF237905|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_031457|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310969|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310884|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK315901|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##BC022895|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK308413|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AF350504|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310872|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_024098|CCDC86|79080|coiled-coil domain containing 86##AK025974|CCDC86|79080|coiled-coil domain containing 86##AK302329|CCDC86|79080|coiled-coil domain containing 86##AK123775|CCDC86|79080|coiled-coil domain containing 86##BC001378|CCDC86|79080|coiled-coil domain containing 86##DQ892603|CCDC86|79080|coiled-coil domain containing 86##DQ895844|CCDC86|79080|coiled-coil domain containing 86##DQ501251|CCDC86|79080|coiled-coil domain containing 86##AF144308|PTGDR2|11251|prostaglandin D2 receptor 2##AK291371|PTGDR2|11251|prostaglandin D2 receptor 2##AK313849|PTGDR2|11251|prostaglandin D2 receptor 2##AB008535|PTGDR2|11251|prostaglandin D2 receptor 2##NM_004778|PTGDR2|11251|prostaglandin D2 receptor 2##NM_207341|ZP1|22917|zona pellucida glycoprotein 1 (sperm receptor)	0.0	
chr11	69025602	69025783	reg1024340.p1	4.112	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-168166	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-209266	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-209342	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	35930	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	430164	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	430218	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.011329	
chr16	89883204	89883307	reg1034132.p1	4.112	+	BT007366 TSC_hg19_v1_chr16_-_89883059 AK299282 X99226 BC022498 BC008979 BC120979 BC127633 BC064540 BC120978 BC141971 BC141972 NM_000135 NM_001018112	-210	-	TSC_hg19_v1_chr16_-_89831446 AK301168	-51801	-	NM_001113525 AK026482	-95290	+	TSC_hg19_v1_chr16_+_89894882 BC111030 NM_032451 AJ422077 BC011119	11650	+	TSC_hg19_v1_chr16_+_89940003 NM_014972 AK301053	56748	+	TSC_hg19_v1_chr16_+_89940021 BC011884 AK024679 BC009349 BC000959 AB528245 AB587412 CU674474 CU679309 EU446609	56791	+	BT007366|FANCA|2175|Fanconi anemia, complementation group A##AK299282|FANCA|2175|Fanconi anemia, complementation group A##X99226|FANCA|2175|Fanconi anemia, complementation group A##BC022498|FANCA|2175|Fanconi anemia, complementation group A##BC008979|FANCA|2175|Fanconi anemia, complementation group A##BC120979|FANCA|2175|Fanconi anemia, complementation group A##BC127633|FANCA|2175|Fanconi anemia, complementation group A##BC064540|FANCA|2175|Fanconi anemia, complementation group A##BC120978|FANCA|2175|Fanconi anemia, complementation group A##BC141971|FANCA|2175|Fanconi anemia, complementation group A##BC141972|FANCA|2175|Fanconi anemia, complementation group A##NM_000135|FANCA|2175|Fanconi anemia, complementation group A##NM_001018112|FANCA|2175|Fanconi anemia, complementation group A##AK301168|FANCA|2175|Fanconi anemia, complementation group A##NM_001113525|ZNF276|92822|zinc finger protein 276##AK026482|ZNF276|92822|zinc finger protein 276##BC111030|SPIRE2|84501|spire homolog 2 (Drosophila)##NM_032451|SPIRE2|84501|spire homolog 2 (Drosophila)##AJ422077|SPIRE2|84501|spire homolog 2 (Drosophila)##BC011119|SPIRE2|84501|spire homolog 2 (Drosophila)##NM_014972|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##AK301053|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##BC011884|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##AK024679|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##BC009349|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##BC000959|TCF25|22980|transcription factor 25 (basic helix-loop-helix)##EU446609|TCF25|22980|transcription factor 25 (basic helix-loop-helix)	0.0	
chr17	74264411	74264511	reg1034466.p1	4.112	+	TSC_hg19_v1_chr17_+_74261431 BC035511 EU176314	-2954	+	TSC_hg19_v1_chr17_+_74261282 BC060859 NM_182565	-3177	+	AK091467 AX747002 AB067504 NM_052916 TSC_hg19_v1_chr17_-_74236615	-28013	-	EU832276 EU832361 BC131559 AL136774 NM_032134	39209	-	TSC_hg19_v1_chr17_-_74349591 CU679229 BC009012	85188	-	TSC_hg19_v1_chr17_-_74349948 D61391 AK312637	85468	-	BC035511|FAM100B|283991|family with sequence similarity 100, member B##EU176314|FAM100B|283991|family with sequence similarity 100, member B##BC060859|FAM100B|283991|family with sequence similarity 100, member B##NM_182565|FAM100B|283991|family with sequence similarity 100, member B##AK091467|RNF157|114804|ring finger protein 157##AB067504|RNF157|114804|ring finger protein 157##NM_052916|RNF157|114804|ring finger protein 157##EU832276|QRICH2|84074|glutamine rich 2##EU832361|QRICH2|84074|glutamine rich 2##BC131559|QRICH2|84074|glutamine rich 2##AL136774|QRICH2|84074|glutamine rich 2##NM_032134|QRICH2|84074|glutamine rich 2##BC009012|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1##D61391|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1##AK312637|PRPSAP1|5635|phosphoribosyl pyrophosphate synthetase-associated protein 1	0.0	
chr22	50050603	50050708	reg1033535.p1	4.112	+	AK125256 NM_015381 AK123443 AY358847	-1078494	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	-1165375	+	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	-2023152	+	AK124962 TSC_hg19_v1_chr22_-_50051168 BC033837 BC048207	478	-	AF005067 NM_014577	167796	-	AK292428 TSC_hg19_v1_chr22_-_50221332 BC030007 BC047508	170611	-	AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK093107|LOC284930|284930|uncharacterized LOC284930##AK124962|C22orf34|348645|chromosome 22 open reading frame 34##BC048207|C22orf34|348645|chromosome 22 open reading frame 34##AF005067|BRD1|23774|bromodomain containing 1##NM_014577|BRD1|23774|bromodomain containing 1##AK292428|BRD1|23774|bromodomain containing 1##BC030007|BRD1|23774|bromodomain containing 1##BC047508|BRD1|23774|bromodomain containing 1	0.0	
chr2	63416088	63416210	reg1015517.p1	4.112	+	NM_014562 TSC_hg19_v1_chr2_+_63277964 AK095680 AK297308 BC007621	-138184	+	NM_001199770	-138958	+	BC029477 NM_001142614	-482119	+	TSC_hg19_v1_chr2_-_63815560 AK310290	399391	-	TSC_hg19_v1_chr2_-_63815583 BX538331 AK055030 AL833623	399468	-	NM_005917	399593	+	NM_014562|OTX1|5013|orthodenticle homeobox 1##AK095680|OTX1|5013|orthodenticle homeobox 1##AK297308|OTX1|5013|orthodenticle homeobox 1##BC007621|OTX1|5013|orthodenticle homeobox 1##NM_001199770|OTX1|5013|orthodenticle homeobox 1##BC029477|EHBP1|23301|EH domain binding protein 1##NM_001142614|EHBP1|23301|EH domain binding protein 1##AK310290|WDPCP|51057|WD repeat containing planar cell polarity effector##BX538331|WDPCP|51057|WD repeat containing planar cell polarity effector##AK055030|WDPCP|51057|WD repeat containing planar cell polarity effector##AL833623|WDPCP|51057|WD repeat containing planar cell polarity effector##NM_005917|MDH1|4190|malate dehydrogenase 1, NAD (soluble)	0.0	
chr3	111855802	111855958	reg1013089.p3	4.112	+	CU688884 BC030506 AY212246 AK313368 AK128276 AF521911 NM_001190259 NM_001190260 NM_152785	-3821	-	TSC_hg19_v1_chr3_+_111805267 AK303588 NM_001171747 NM_024616 AY830714 AK026839 BC017064 AK298076	-50652	+	AK131211 NM_001042575 BC117322	-97372	+	BC044801 NM_183061 AK128084	157208	-	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	196078	+	AL832529 AK129797 AK293399 BC031103 TSC_hg19_v1_chr3_+_112052024 AK074972	196144	+	BC030506|GCET2|257144|germinal center expressed transcript 2##AY212246|GCET2|257144|germinal center expressed transcript 2##AK313368|GCET2|257144|germinal center expressed transcript 2##AF521911|GCET2|257144|germinal center expressed transcript 2##NM_001190259|GCET2|257144|germinal center expressed transcript 2##NM_001190260|GCET2|257144|germinal center expressed transcript 2##NM_152785|GCET2|257144|germinal center expressed transcript 2##AK303588|C3orf52|79669|chromosome 3 open reading frame 52##NM_001171747|C3orf52|79669|chromosome 3 open reading frame 52##NM_024616|C3orf52|79669|chromosome 3 open reading frame 52##AY830714|C3orf52|79669|chromosome 3 open reading frame 52##AK026839|C3orf52|79669|chromosome 3 open reading frame 52##BC017064|C3orf52|79669|chromosome 3 open reading frame 52##AK298076|C3orf52|79669|chromosome 3 open reading frame 52##AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7##BC044801|SLC9A10|285335|solute carrier family 9, member 10##NM_183061|SLC9A10|285335|solute carrier family 9, member 10##AK128084|SLC9A10|285335|solute carrier family 9, member 10##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule##AL832529|CD200|4345|CD200 molecule##AK129797|CD200|4345|CD200 molecule##AK293399|CD200|4345|CD200 molecule##BC031103|CD200|4345|CD200 molecule##AK074972|CD200|4345|CD200 molecule	0.0	
chr4	148787827	148787957	reg1000344.p1	4.112	+	AB050785 BC128055 NM_024605 BC126899 BC109029 BC109030	-134435	+	TSC_hg19_v1_chr4_+_148653238 AK123785	-134641	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	-182628	-	TSC_hg19_v1_chr4_-_149357955 AB587357	570090	-	TSC_hg19_v1_chr4_-_149363305 BC111758	575447	-	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	575692	-	AB050785|ARHGAP10|79658|Rho GTPase activating protein 10##BC128055|ARHGAP10|79658|Rho GTPase activating protein 10##NM_024605|ARHGAP10|79658|Rho GTPase activating protein 10##BC126899|ARHGAP10|79658|Rho GTPase activating protein 10##BC109029|ARHGAP10|79658|Rho GTPase activating protein 10##BC109030|ARHGAP10|79658|Rho GTPase activating protein 10##AK123785|ARHGAP10|79658|Rho GTPase activating protein 10##BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	0.0	
chr8	141768537	141768717	reg1032273.p1	4.112	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-123003	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-247064	+	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	-247235	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	242629	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	370110	+	AK128212 NM_001080431	470045	-	BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4	0.165668	
chr13	108330587	108330681	reg1032879.p1	4.111	+	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	-1110149	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	-1143285	-	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-2212043	+	NM_001080396	188825	-	NM_002312 X83441	536495	-	AK292419 AK314844 BC037491 NM_206937	537241	-	BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A##NM_002312|LIG4|3981|ligase IV, DNA, ATP-dependent##X83441|LIG4|3981|ligase IV, DNA, ATP-dependent##AK292419|LIG4|3981|ligase IV, DNA, ATP-dependent##AK314844|LIG4|3981|ligase IV, DNA, ATP-dependent##BC037491|LIG4|3981|ligase IV, DNA, ATP-dependent##NM_206937|LIG4|3981|ligase IV, DNA, ATP-dependent	0.0	
chr17	47269270	47269417	reg1035827.p1	4.111	+	AF510036 AJ517770 NM_153446 BC113675 BC113677 HQ258321 HQ258467	-58986	+	TSC_hg19_v1_chr17_+_47210130 NM_001159387 AJ517771	-59243	+	AK302876 NM_001159388	-59522	+	BC008663 NM_031498 AK312839 NM_001198755 NM_001198756	17408	-	AB037886 NM_001135186 NM_016428	18245	+	NM_001198754	18592	-	AF510036|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517770|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_153446|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113675|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113677|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258321|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258467|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159387|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517771|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AK302876|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159388|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC008663|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##NM_031498|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AK312839|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##NM_001198755|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##NM_001198756|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AB037886|ABI3|51225|ABI family, member 3##NM_001135186|ABI3|51225|ABI family, member 3##NM_016428|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2	0.785116	CTCF.p2:-35:0.785
chr19	37809124	37809191	reg1028298.p2	4.111	+	TSC_hg19_v1_chr19_+_37808794 AK056243	-332	+	AK093182 AX747975 AY438646 NM_152604	-91792	+	TSC_hg19_v1_chr19_+_37709098 AK122892	-100009	+	TSC_hg19_v1_chr19_+_37825560 AK301601 AB013897 AK299969 AK223616 BC017256 NM_181786 BC010024	16398	+	TSC_hg19_v1_chr19_+_37862089 NM_032453 BC014325 AK301135 AK091585 AX747074	52924	+	AL833408 AY835704 NM_152484	149181	-	AK056243|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AK093182|ZNF383|163087|zinc finger protein 383##AY438646|ZNF383|163087|zinc finger protein 383##NM_152604|ZNF383|163087|zinc finger protein 383##AK122892|ZNF383|163087|zinc finger protein 383##AK301601|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AB013897|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AK299969|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AK223616|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##BC017256|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##NM_181786|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##BC010024|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##NM_032453|ZNF527|84503|zinc finger protein 527##BC014325|ZNF527|84503|zinc finger protein 527##AK301135|ZNF527|84503|zinc finger protein 527##AK091585|ZNF527|84503|zinc finger protein 527##AL833408|ZNF569|148266|zinc finger protein 569##AY835704|ZNF569|148266|zinc finger protein 569##NM_152484|ZNF569|148266|zinc finger protein 569	0.0	
chr3	101757357	101757503	reg1027673.p1	4.111	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-189056	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-210470	+	AK289689 NM_001134456	-259145	+	AY090780 NM_175056 BC143817	396437	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	3328150	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	3328392	+	AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule	0.0	
chr4	128990219	128990334	reg1033127.p1	4.111	+	AL832170 NM_018078 NM_032239 NM_178043 TSC_hg19_v1_chr4_+_128982502	-7774	+	TSC_hg19_v1_chr4_+_128982483 BC002840 BC018794 BC110300	-7790	+	TSC_hg19_v1_chr4_+_128982466 AK310421 AK092764 AX747714	-7834	+	TSC_hg19_v1_chr4_-_129208960 DQ893193 DQ893194 DQ893694 DQ896520 DQ896521 DQ896522 DQ896866 AJ002030 AX775755	218668	-	AK091741 AX747155 TSC_hg19_v1_chr4_-_129208964 BC016692	218688	-	TSC_hg19_v1_chr4_-_129208969 BC092478	218715	-	AL832170|LARP1B|55132|La ribonucleoprotein domain family, member 1B##NM_018078|LARP1B|55132|La ribonucleoprotein domain family, member 1B##NM_032239|LARP1B|55132|La ribonucleoprotein domain family, member 1B##NM_178043|LARP1B|55132|La ribonucleoprotein domain family, member 1B##BC002840|LARP1B|55132|La ribonucleoprotein domain family, member 1B##BC018794|LARP1B|55132|La ribonucleoprotein domain family, member 1B##BC110300|LARP1B|55132|La ribonucleoprotein domain family, member 1B##AK310421|LARP1B|55132|La ribonucleoprotein domain family, member 1B##AK092764|LARP1B|55132|La ribonucleoprotein domain family, member 1B##DQ893193|PGRMC2|10424|progesterone receptor membrane component 2##DQ893194|PGRMC2|10424|progesterone receptor membrane component 2##DQ893694|PGRMC2|10424|progesterone receptor membrane component 2##DQ896520|PGRMC2|10424|progesterone receptor membrane component 2##DQ896521|PGRMC2|10424|progesterone receptor membrane component 2##DQ896522|PGRMC2|10424|progesterone receptor membrane component 2##DQ896866|PGRMC2|10424|progesterone receptor membrane component 2##AJ002030|PGRMC2|10424|progesterone receptor membrane component 2##AK091741|PGRMC2|10424|progesterone receptor membrane component 2##BC016692|PGRMC2|10424|progesterone receptor membrane component 2##BC092478|PGRMC2|10424|progesterone receptor membrane component 2	0.997485	CTCF.p2:10:0.997
chr5	14144225	14144343	reg1034675.p1	4.111	+	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	-612	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-132414	-	AX800026 AY045575 NM_001369	-199696	-	TSC_hg19_v1_chr5_+_14488527 AK131423	344255	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	437616	+	TSC_hg19_v1_chr5_+_14581949 AK001989 BC011524 CU679940	437680	+	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A##AK001989|FAM105A|54491|family with sequence similarity 105, member A##BC011524|FAM105A|54491|family with sequence similarity 105, member A	0.0	
chr5	142828212	142828347	reg1032612.p2	4.111	+	NM_001018074 NM_001018075 NM_001018077	-13203	-	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-44113	-	TSC_hg19_v1_chr5_-_142784036 AK302050 NM_001018076	-44247	-	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	363479	+	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	721856	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	721897	-	NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5	0.61883	CTCF.p2:3:0.619
chr11	111247191	111247358	reg1030535.p1	4.110	+	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	-77241	+	BC039669 NM_198498	-120568	+	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	-663989	-	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	2678	-	NM_006235	2882	-	BC031045 NM_017589	135796	-	AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##BC039669|C11orf53|341032|chromosome 11 open reading frame 53##NM_198498|C11orf53|341032|chromosome 11 open reading frame 53##AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##NM_006235|POU2AF1|5450|POU class 2 associating factor 1##BC031045|BTG4|54766|B-cell translocation gene 4##NM_017589|BTG4|54766|B-cell translocation gene 4	0.0	
chr1	16694282	16694462	reg1029238.p2	4.110	+	NM_001114600 NM_015609 BC023988 TSC_hg19_v1_chr1_+_16693726 BX640985 AJ295987 AB097042 AB097043 AB097046 AK297926 AK298576 AK308787 AL050028 AK316205 BC065538 AB097044 AB097045 BC010631	-701	+	TSC_hg19_v1_chr1_-_16678969 BC063864 NM_018994 AK055598 BC043410	-15424	-	TSC_hg19_v1_chr1_-_16678922 AK310671	-15454	-	AK128106 BC022039 AK311614 AY327405 NM_198546	69530	-	NM_001145277 NM_001145278 NM_018090 TSC_hg19_v1_chr1_+_16767200	72812	+	AK223344 TSC_hg19_v1_chr1_+_16767218 AK300764 AK302227 AK023545 BC018914	72853	+	NM_001114600|C1orf144|26099|chromosome 1 open reading frame 144##NM_015609|C1orf144|26099|chromosome 1 open reading frame 144##BC023988|C1orf144|26099|chromosome 1 open reading frame 144##BX640985|C1orf144|26099|chromosome 1 open reading frame 144##AJ295987|C1orf144|26099|chromosome 1 open reading frame 144##AB097042|C1orf144|26099|chromosome 1 open reading frame 144##AB097043|C1orf144|26099|chromosome 1 open reading frame 144##AB097046|C1orf144|26099|chromosome 1 open reading frame 144##AK297926|C1orf144|26099|chromosome 1 open reading frame 144##AK298576|C1orf144|26099|chromosome 1 open reading frame 144##AK308787|C1orf144|26099|chromosome 1 open reading frame 144##AL050028|C1orf144|26099|chromosome 1 open reading frame 144##AK316205|C1orf144|26099|chromosome 1 open reading frame 144##BC065538|C1orf144|26099|chromosome 1 open reading frame 144##AB097044|C1orf144|26099|chromosome 1 open reading frame 144##AB097045|C1orf144|26099|chromosome 1 open reading frame 144##BC010631|C1orf144|26099|chromosome 1 open reading frame 144##BC063864|FBXO42|54455|F-box protein 42##NM_018994|FBXO42|54455|F-box protein 42##AK055598|FBXO42|54455|F-box protein 42##BC043410|FBXO42|54455|F-box protein 42##AK310671|FBXO42|54455|F-box protein 42##AK128106|SPATA21|374955|spermatogenesis associated 21##BC022039|SPATA21|374955|spermatogenesis associated 21##AK311614|SPATA21|374955|spermatogenesis associated 21##AY327405|SPATA21|374955|spermatogenesis associated 21##NM_198546|SPATA21|374955|spermatogenesis associated 21##NM_001145277|NECAP2|55707|NECAP endocytosis associated 2##NM_001145278|NECAP2|55707|NECAP endocytosis associated 2##NM_018090|NECAP2|55707|NECAP endocytosis associated 2##AK223344|NECAP2|55707|NECAP endocytosis associated 2##AK300764|NECAP2|55707|NECAP endocytosis associated 2##AK302227|NECAP2|55707|NECAP endocytosis associated 2##AK023545|NECAP2|55707|NECAP endocytosis associated 2##BC018914|NECAP2|55707|NECAP endocytosis associated 2	0.0	
chr14	24711975	24712102	reg1012826.p1	4.110	+	AK315084 AF195512 AK294119 BX161478 TSC_hg19_v1_chr14_-_24711819 AK023166 AK225379 BC019343 BC000710 NM_001099274 NM_012461	-215	-	CU678872 DQ893390 DQ896711 TSC_hg19_v1_chr14_-_24711567 BC005030	-439	-	NM_001002002 NM_016576 BC003053 BC008021 BX247993 BC009832	-9908	+	M55183 BC034699 D90287 AK315828 M62925 AK291350 AK299436 AK315843 AK301652 AK315819 NM_000359	20341	-	TSC_hg19_v1_chr14_-_24740390 AK303247	28350	-	TSC_hg19_v1_chr14_+_24740427 AB593166	28399	+	AK315084|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##AF195512|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##AK294119|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##BX161478|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##AK023166|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##AK225379|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##BC019343|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##NM_001099274|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##NM_012461|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##DQ893390|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##DQ896711|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##BC005030|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##NM_001002002|GMPR2|51292|guanosine monophosphate reductase 2##NM_016576|GMPR2|51292|guanosine monophosphate reductase 2##BC003053|GMPR2|51292|guanosine monophosphate reductase 2##BC008021|GMPR2|51292|guanosine monophosphate reductase 2##BX247993|GMPR2|51292|guanosine monophosphate reductase 2##BC009832|GMPR2|51292|guanosine monophosphate reductase 2##M55183|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##BC034699|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##D90287|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK315828|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##M62925|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK291350|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK299436|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK315843|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK301652|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK315819|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##NM_000359|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK303247|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit	0.0	
chr15	68976270	68976384	reg1035271.p1	4.110	+	AK289678 NM_001190457	-52001	+	NM_001190456	-67449	+	TSC_hg19_v1_chr15_+_68871402 NM_006091	-104984	+	AB463390 AY349171 BC106719 BC125143 BT007436 DQ893294 DQ896729 U60823 TSC_hg19_v1_chr15_-_69113208 U73477 X75090 AK223280	136822	-	TSC_hg19_v1_chr15_-_69113235 BC007200 BC000608 AF025684 AK312703	136900	-	TSC_hg19_v1_chr15_-_69113264 NM_006305	136933	-	AK289678|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190457|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##AY349171|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC106719|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC125143|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BT007436|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ893294|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ896729|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U60823|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U73477|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##X75090|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK223280|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC007200|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC000608|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AF025684|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK312703|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##NM_006305|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	0.0	
chr1	89343172	89343303	reg1029715.p1	4.110	+	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	-193142	+	TSC_hg19_v1_chr1_+_87797426 BC065818	-1545822	+	TSC_hg19_v1_chr1_+_87797312 AY321514	-1545912	+	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	13974	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	14036	-	TSC_hg19_v1_chr1_-_89458288 AL833593 BC012942 CR627392 AK301326 AK315917 AK057176 AY028624	115122	-	NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##BC065818|LMO4|8543|LIM domain only 4##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB##AL833593|CCBL2|56267|cysteine conjugate-beta lyase 2##BC012942|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##CR627392|CCBL2|56267|cysteine conjugate-beta lyase 2##AK301326|CCBL2|56267|cysteine conjugate-beta lyase 2##AK315917|CCBL2|56267|cysteine conjugate-beta lyase 2##AK057176|CCBL2|56267|cysteine conjugate-beta lyase 2##AY028624|CCBL2|56267|cysteine conjugate-beta lyase 2	0.997644	CTCF.p2:6:0.998
chr19	17403442	17403623	reg1008346.p1	4.110	+	AK303628 NM_152363	-11079	+	TSC_hg19_v1_chr19_+_17378266 AK000578 BC091491 BC000788	-25238	+	TSC_hg19_v1_chr19_+_17378251 AK308590 AK299493 NM_001033549 NM_014173 AF161491 AK025970 AK301193 BC006244 AL136692 AK225047	-25327	+	BC020173 BC039087 TSC_hg19_v1_chr19_-_17414209 BC007895 AK225140 AK315366 AK021805 AK225340 AK298251 NM_024527	10650	-	BC021801 NM_023937 TSC_hg19_v1_chr19_+_17416677 AB049652 BC000071	13059	+	TSC_hg19_v1_chr19_+_17420345 NM_024050	16749	+	AK303628|ANKLE1|126549|ankyrin repeat and LEM domain containing 1##NM_152363|ANKLE1|126549|ankyrin repeat and LEM domain containing 1##AK000578|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC091491|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC000788|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK308590|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK299493|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_001033549|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_014173|BABAM1|29086|BRISC and BRCA1 A complex member 1##AF161491|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK025970|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK301193|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC006244|BABAM1|29086|BRISC and BRCA1 A complex member 1##AL136692|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK225047|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC020173|ABHD8|79575|abhydrolase domain containing 8##BC039087|ABHD8|79575|abhydrolase domain containing 8##BC007895|ABHD8|79575|abhydrolase domain containing 8##AK225140|ABHD8|79575|abhydrolase domain containing 8##AK315366|ABHD8|79575|abhydrolase domain containing 8##AK021805|ABHD8|79575|abhydrolase domain containing 8##AK225340|ABHD8|79575|abhydrolase domain containing 8##AK298251|ABHD8|79575|abhydrolase domain containing 8##NM_024527|ABHD8|79575|abhydrolase domain containing 8##BC021801|MRPL34|64981|mitochondrial ribosomal protein L34##NM_023937|MRPL34|64981|mitochondrial ribosomal protein L34##AB049652|MRPL34|64981|mitochondrial ribosomal protein L34##BC000071|MRPL34|64981|mitochondrial ribosomal protein L34##NM_024050|DDA1|79016|DET1 and DDB1 associated 1	0.0	
chr19	2698716	2698897	reg1028415.p1	4.110	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-222568	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-241846	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-241870	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	3889	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	3936	-	AK124445 TSC_hg19_v1_chr19_-_2717420	18543	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.069346	
chr20	62151354	62151435	reg1028182.p2	4.110	+	TSC_hg19_v1_chr20_-_62130437 X70940 AK307536 NM_001958 BC110409	-20881	-	BT007043 AB527167 Y15065 BC000699 AF110020 TSC_hg19_v1_chr20_-_62104002 AK293727 AF033348 AF074247 D82346 NM_004518 NM_172106 NM_172107 NM_172108 NM_172109	-47465	-	X89741 Y08421 AB590558 AK314907 TSC_hg19_v1_chr20_-_61992648 BC096290 BC096291 BC096292 BC096293 L35901 NM_000744 U62433	-158763	-	TSC_hg19_v1_chr20_+_62152117 BC002531 NM_024299 AK024699 AK311318	739	+	TSC_hg19_v1_chr20_-_62168681 AB527573 X78549 AK301691 AK315232 BC035843 NM_005975 AK301364	17310	-	AB527384 NM_080823	27441	-	X70940|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##AK307536|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##NM_001958|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC110409|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BT007043|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##Y15065|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##BC000699|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF110020|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AK293727|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF033348|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF074247|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##D82346|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_004518|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172106|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172107|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172108|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172109|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##X89741|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##Y08421|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##AK314907|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096290|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096291|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096292|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096293|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##L35901|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##NM_000744|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##U62433|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##X78549|PTK6|5753|PTK6 protein tyrosine kinase 6##AK301691|PTK6|5753|PTK6 protein tyrosine kinase 6##AK315232|PTK6|5753|PTK6 protein tyrosine kinase 6##BC035843|PTK6|5753|PTK6 protein tyrosine kinase 6##NM_005975|PTK6|5753|PTK6 protein tyrosine kinase 6##AK301364|PTK6|5753|PTK6 protein tyrosine kinase 6##NM_080823|SRMS|6725|src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites	0.015765	
chr2	111977091	111977271	reg1028286.p2	4.110	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-98694	+	AK300513 NM_001142807 BC022268	-487002	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-541359	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	664445	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	664580	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	679004	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.0	
chr2	37862608	37862788	reg1031500.p1	4.110	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-290885	+	BC030706 BC012820 AB015982 NM_005813	-318505	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-403852	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	36081	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	36691	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	289734	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.0	
chr10	11784540	11784647	reg1039880.p1	4.109	+	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	-195	+	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	-130957	-	NM_001080491	-210320	-	TSC_hg19_v1_chr10_+_11865354 BC017269 BC048800 NM_153256	80765	+	AK056703 TSC_hg19_v1_chr10_-_11936707	152109	-	TSC_hg19_v1_chr10_-_12084777 BC054011 AK310925 BC114964 BC115737 BC090919 NM_015542 AF318574 AF301013 AK096191	300215	-	NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_001080491|USP6NL|9712|USP6 N-terminal like##BC017269|C10orf47|254427|chromosome 10 open reading frame 47##BC048800|C10orf47|254427|chromosome 10 open reading frame 47##NM_153256|C10orf47|254427|chromosome 10 open reading frame 47##AK056703|LOC219731|219731|uncharacterized LOC219731##AK310925|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC114964|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC115737|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##BC090919|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##NM_015542|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AF318574|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AF301013|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)##AK096191|UPF2|26019|UPF2 regulator of nonsense transcripts homolog (yeast)	0.0	
chr11	1968496	1968597	reg1029782.p1	4.109	+	TSC_hg19_v1_chr11_+_1968573 NM_021134 U26596 Z49254 AK313805 AK128774	-5	+	NM_001042780 NM_001042781 NM_001042782 NM_006757 BC062430 TSC_hg19_v1_chr11_+_1940935 BX640689 BC050446 AK056968	-27659	+	NM_001013254 NM_001013255	-76421	+	BC027710 TSC_hg19_v1_chr11_+_1968589	43	+	BC106079 BC010185 TSC_hg19_v1_chr11_-_2016854	48252	-	BC009853 AK123560 BC013067 TSC_hg19_v1_chr11_-_2017955	49343	-	NM_021134|MRPL23|6150|mitochondrial ribosomal protein L23##U26596|MRPL23|6150|mitochondrial ribosomal protein L23##Z49254|MRPL23|6150|mitochondrial ribosomal protein L23##AK313805|MRPL23|6150|mitochondrial ribosomal protein L23##AK128774|MRPL23|6150|mitochondrial ribosomal protein L23##NM_001042780|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042781|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042782|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_006757|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC062430|TNNT3|7140|troponin T type 3 (skeletal, fast)##BX640689|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC050446|TNNT3|7140|troponin T type 3 (skeletal, fast)##AK056968|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001013254|LSP1|4046|lymphocyte-specific protein 1##NM_001013255|LSP1|4046|lymphocyte-specific protein 1##BC027710|MRPL23|6150|mitochondrial ribosomal protein L23##BC010185|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC009853|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AK123560|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC013067|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)	0.046251	
chr12	54608856	54608995	reg1003590.p2	4.109	+	BC088352 BC000417 TSC_hg19_v1_chr12_-_54582755 AK091468 AX747003 NM_001243789 NM_001243790 BC105607 AK001789 AK001235 AK222473 AK290274 NM_001243787 NM_001243788 NM_001243791 NM_014311	-26239	-	BC030212 TSC_hg19_v1_chr12_-_54541132	-67844	-	TSC_hg19_v1_chr12_+_54519846 BC009385	-89067	+	BC006821 NM_001127322 TSC_hg19_v1_chr12_-_54653330	44399	-	NM_001127321 TSC_hg19_v1_chr12_-_54653370	44446	-	TSC_hg19_v1_chr12_-_54673880 L07515 S62077	64957	-	BC088352|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC000417|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK091468|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243790|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC105607|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001789|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK001235|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK222473|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##AK290274|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243787|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243788|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_001243791|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##NM_014311|SMUG1|23583|single-strand-selective monofunctional uracil-DNA glycosylase 1##BC009385|LOC400043|400043|uncharacterized LOC400043##BC006821|CBX5|23468|chromobox homolog 5##NM_001127322|CBX5|23468|chromobox homolog 5##NM_001127321|CBX5|23468|chromobox homolog 5##L07515|CBX5|23468|chromobox homolog 5##S62077|CBX5|23468|chromobox homolog 5	0.0	
chr14	22580131	22580221	reg1031207.p2	4.109	+	AB463964 NM_001001912 AY726598	-446854	+	NM_001005466 AB529274 BC137371 BC137382	-477130	-	AB528817 NM_001005465	-541302	-	X58763 TSC_hg19_v1_chr14_+_22989364	409173	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	477910	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	477958	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.952802	CTCF.p2:-10:0.953
chr14	89493603	89493669	reg1009589.p1	4.109	+	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-202643	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-234426	-	NM_207662 BC027607 AF474376	-432883	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	385140	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	389774	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	591959	-	AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3	0.038793	
chr15	80189001	80189126	reg1031706.p1	4.109	+	AB028947 NM_015206 BC152466	-464204	+	TSC_hg19_v1_chr15_+_79603557 AJ132270 CR457384	-585496	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	-585560	+	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	317	-	NM_001199758	563	-	AL109714 NM_001100879	18534	-	AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##AJ132270|TMED3|23423|transmembrane emp24 protein transport domain containing 3##CR457384|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL109714|ST20|400410|suppressor of tumorigenicity 20##NM_001100879|ST20|400410|suppressor of tumorigenicity 20	0.0	
chr16	23313825	23313950	reg1030066.p1	4.109	+	NM_000336 BC036352 X87159 AK313192	-260	+	U48936 BC059391 NM_001039 TSC_hg19_v1_chr16_+_23194066	-119835	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	-153338	-	TSC_hg19_v1_chr16_-_23464487 BC000549 BC037563 NM_153603	150608	-	TSC_hg19_v1_chr16_-_23521748 AB384559 CU674130 DQ892534 DQ895745 BC050620 AF165531	207848	-	AF190863 AF323754 AF233522 TSC_hg19_v1_chr16_-_23521769	207875	-	NM_000336|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC036352|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##X87159|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##AK313192|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##U48936|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##BC059391|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_001039|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31##BC000549|COG7|91949|component of oligomeric golgi complex 7##BC037563|COG7|91949|component of oligomeric golgi complex 7##NM_153603|COG7|91949|component of oligomeric golgi complex 7##DQ892534|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##DQ895745|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##BC050620|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF165531|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF190863|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF323754|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF233522|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	0.083825	
chr16	29515099	29515245	reg1037402.p2	4.109	+	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	-43946	+	BC022832 NM_001031827 NM_001039182	-48888	-	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	-49321	+	CU687812 AK304513 TSC_hg19_v1_chr16_-_29606405	91173	-	TSC_hg19_v1_chr16_-_29606667 AK316536	91501	-	AB040413 AB055226 TSC_hg19_v1_chr16_-_29625045	109870	-	AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK304513|LOC440354|440354|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene	0.0	
chr17	80064284	80064401	reg1031806.p2	4.109	+	TSC_hg19_v1_chr17_-_80056105 BC063242 NM_004104	-8238	-	TSC_hg19_v1_chr17_-_80056081 AB209988 U29344	-8275	-	TSC_hg19_v1_chr17_-_80054282 AY451392 U26644 AB384663	-10070	-	TSC_hg19_v1_chr17_-_80170705 BC040264 BC110997 NM_198082	106393	-	NM_001042422 NM_001206950 TSC_hg19_v1_chr17_+_80186285	122007	+	NM_004207 TSC_hg19_v1_chr17_+_80186920 AK127090 AK223040 U81800	122574	+	BC063242|FASN|2194|fatty acid synthase##NM_004104|FASN|2194|fatty acid synthase##AB209988|FASN|2194|fatty acid synthase##U29344|FASN|2194|fatty acid synthase##AY451392|FASN|2194|fatty acid synthase##U26644|FASN|2194|fatty acid synthase##BC040264|CCDC57|284001|coiled-coil domain containing 57##BC110997|CCDC57|284001|coiled-coil domain containing 57##NM_198082|CCDC57|284001|coiled-coil domain containing 57##NM_001042422|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_001206950|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_004207|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##AK223040|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##U81800|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)	0.065812	
chr3	13536039	13536148	reg1030659.p1	4.109	+	NM_024827 TSC_hg19_v1_chr3_+_13521806 AK299021 AK025426 AK025890 BC009676 NM_001136041 AK293223	-14281	+	TSC_hg19_v1_chr3_-_13461832 BC020573 NM_024923	-74276	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	-74361	-	AK129883 NM_001004019 NM_001998 TSC_hg19_v1_chr3_+_13590624	54532	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	54570	+	AK304827 NM_001165035	74146	+	NM_024827|HDAC11|79885|histone deacetylase 11##AK299021|HDAC11|79885|histone deacetylase 11##AK025426|HDAC11|79885|histone deacetylase 11##AK025890|HDAC11|79885|histone deacetylase 11##BC009676|HDAC11|79885|histone deacetylase 11##NM_001136041|HDAC11|79885|histone deacetylase 11##AK293223|HDAC11|79885|histone deacetylase 11##BC020573|NUP210|23225|nucleoporin 210kDa##NM_024923|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa##AK129883|FBLN2|2199|fibulin 2##NM_001004019|FBLN2|2199|fibulin 2##NM_001998|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2##AK304827|FBLN2|2199|fibulin 2##NM_001165035|FBLN2|2199|fibulin 2	0.016526	
chr6	24492899	24492991	reg1028449.p1	4.109	+	L11702 CU676688 AY007546 BC093645 BC112001 L11701 AK310692 BC020748 NM_177483 AJ308108 NM_001503	-3152	-	TSC_hg19_v1_chr6_+_24403163 NM_020662 AK297418 AK299825 AF288288 BC069009 AK054587 AK291058 AK298849 BC001028 BC018833 AF293076 CU686695	-89737	+	BC050704 NM_001195610	-109426	-	TSC_hg19_v1_chr6_+_24495080 AK290800 AK294699 AK315380	2133	+	TSC_hg19_v1_chr6_+_24495196 AK314357 BC034321 NM_001080 NM_170740 DQ891671 DQ894857 AJ427355 Y11192	2250	+	AK310289 NM_001252328	90509	-	L11702|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AY007546|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC093645|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC112001|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##L11701|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310692|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC020748|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_177483|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AJ308108|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_001503|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_020662|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK297418|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK299825|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AF288288|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC069009|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK054587|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK291058|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK298849|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC001028|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC018833|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AF293076|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC050704|DCDC2|51473|doublecortin domain containing 2##NM_001195610|DCDC2|51473|doublecortin domain containing 2##AK290800|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK294699|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK315380|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK314357|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##BC034321|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_001080|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_170740|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ891671|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ894857|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AJ427355|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##Y11192|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK310289|KIAA0319|9856|KIAA0319##NM_001252328|KIAA0319|9856|KIAA0319	0.038965	
chrX	153842018	153842120	reg1037186.p1	4.109	+	NM_001327 NM_139250 U87459 BC130362 BC130364 AJ003149 AJ275978	-28587	+	AF261086 NM_003639 AF091453	-65972	+	BC000299 TSC_hg19_v1_chrX_+_153775876 AK000593 BC046922 AF062089	-66200	+	AJ275978 AJ003149 BC130362 BC130364 NM_001327 NM_139250 U87459	5386	-	AJ012833 AM393026 AM393495 AM393696 AM393839 AB463462 BC002833 BC113998 BC114933 BC128045 AJ223041 AY679088 AY679089 AJ012834 AJ012835 AJ223040 NM_020994 NM_172377	39735	-	TSC_hg19_v1_chrX_-_153979326 AB463697 AK126283 AY057989 NM_001081573 NM_080612 AK307927	137228	-	NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AF261086|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##NM_003639|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AF091453|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC000299|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AK000593|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC046922|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AF062089|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##AJ012833|CTAG2|30848|cancer/testis antigen 2##AM393026|CTAG2|30848|cancer/testis antigen 2##AM393495|CTAG2|30848|cancer/testis antigen 2##AM393696|CTAG2|30848|cancer/testis antigen 2##AM393839|CTAG2|30848|cancer/testis antigen 2##BC002833|CTAG2|30848|cancer/testis antigen 2##BC113998|CTAG2|30848|cancer/testis antigen 2##BC114933|CTAG2|30848|cancer/testis antigen 2##BC128045|CTAG2|30848|cancer/testis antigen 2##AJ223041|CTAG2|30848|cancer/testis antigen 2##AY679088|CTAG2|30848|cancer/testis antigen 2##AY679089|CTAG2|30848|cancer/testis antigen 2##AJ012834|CTAG2|30848|cancer/testis antigen 2##AJ012835|CTAG2|30848|cancer/testis antigen 2##AJ223040|CTAG2|30848|cancer/testis antigen 2##NM_020994|CTAG2|30848|cancer/testis antigen 2##NM_172377|CTAG2|30848|cancer/testis antigen 2##AK126283|GAB3|139716|GRB2-associated binding protein 3##AY057989|GAB3|139716|GRB2-associated binding protein 3##NM_001081573|GAB3|139716|GRB2-associated binding protein 3##NM_080612|GAB3|139716|GRB2-associated binding protein 3##AK307927|GAB3|139716|GRB2-associated binding protein 3	0.174746	
chrX	93129697	93129827	reg1031844.p1	4.109	+	NM_001171109 NM_001171110 NM_001171111 NM_173698	-200751	+	AK090772 D50370 TSC_hg19_v1_chrX_-_92928576 BC034954 AK315176 AK223621 BC094729 AK095682 NM_004538	-201139	-	AJ564931 NM_001168360 NM_001168361 NM_001168362 NM_001168363 AF206516 AF217288 AY861432 AY861433 AY861434 AY861435	-2039281	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	2809989	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	2810192	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	3009208	+	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A##NM_001171110|FAM133A|286499|family with sequence similarity 133, member A##NM_001171111|FAM133A|286499|family with sequence similarity 133, member A##NM_173698|FAM133A|286499|family with sequence similarity 133, member A##AK090772|NAP1L3|4675|nucleosome assembly protein 1-like 3##D50370|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC034954|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK315176|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK223621|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC094729|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK095682|NAP1L3|4675|nucleosome assembly protein 1-like 3##NM_004538|NAP1L3|4675|nucleosome assembly protein 1-like 3##AJ564931|PCDH11X|27328|protocadherin 11 X-linked##NM_001168360|PCDH11X|27328|protocadherin 11 X-linked##NM_001168361|PCDH11X|27328|protocadherin 11 X-linked##NM_001168362|PCDH11X|27328|protocadherin 11 X-linked##NM_001168363|PCDH11X|27328|protocadherin 11 X-linked##AF206516|PCDH11X|27328|protocadherin 11 X-linked##AF217288|PCDH11X|27328|protocadherin 11 X-linked##AY861432|PCDH11X|27328|protocadherin 11 X-linked##AY861433|PCDH11X|27328|protocadherin 11 X-linked##AY861434|PCDH11X|27328|protocadherin 11 X-linked##AY861435|PCDH11X|27328|protocadherin 11 X-linked##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa	0.99479	CTCF.p2:-5:0.995
chr11	92468346	92468457	reg1035623.p1	4.108	+	NM_001008781	-383140	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-2483991	+	AK290231 NM_001144073 NM_012124	-2511870	-	BC069163 NM_005959 U25341 AY521019	234438	+	TSC_hg19_v1_chr11_-_92930978 CU690400	462586	-	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	462684	-	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4	0.0	
chr1	212662246	212662344	reg1025004.p2	4.108	+	TSC_hg19_v1_chr1_+_212606264 AF173937 NM_013349 AK074431 AK223135 AY762102 BC008823 AB126219 AF049672	-55983	+	TSC_hg19_v1_chr1_-_212588248 AK297200 NM_001198862 AK024066 NM_018252	-74043	-	TSC_hg19_v1_chr1_-_212588235 AK001736	-74060	-	NM_001030287	76380	+	NM_001040619 NM_001206484 NM_001206488 NM_001674 TSC_hg19_v1_chr1_+_212782102 AK294296	119740	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	119812	+	AF173937|NENF|29937|neudesin neurotrophic factor##NM_013349|NENF|29937|neudesin neurotrophic factor##AK074431|NENF|29937|neudesin neurotrophic factor##AK223135|NENF|29937|neudesin neurotrophic factor##AY762102|NENF|29937|neudesin neurotrophic factor##BC008823|NENF|29937|neudesin neurotrophic factor##AB126219|NENF|29937|neudesin neurotrophic factor##AF049672|NENF|29937|neudesin neurotrophic factor##AK297200|TMEM206|55248|transmembrane protein 206##NM_001198862|TMEM206|55248|transmembrane protein 206##AK024066|TMEM206|55248|transmembrane protein 206##NM_018252|TMEM206|55248|transmembrane protein 206##AK001736|TMEM206|55248|transmembrane protein 206##NM_001030287|ATF3|467|activating transcription factor 3##NM_001040619|ATF3|467|activating transcription factor 3##NM_001206484|ATF3|467|activating transcription factor 3##NM_001206488|ATF3|467|activating transcription factor 3##NM_001674|ATF3|467|activating transcription factor 3##AK294296|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3	0.0	
chr13	49107081	49107184	reg1033319.p1	4.108	+	TSC_hg19_v1_chr13_+_49050586 AK307125	-56542	+	BC039373 BC045651 NM_005767	-88312	-	AK122856 NM_001162497	-106090	-	TSC_hg19_v1_chr13_-_49107217 BC029052 AK298438 AK301516 AK304598	69	-	TSC_hg19_v1_chr13_-_49107219 AK310081	90	-	TSC_hg19_v1_chr13_-_49107313 AK315703 NM_001268	157	-	AK307125|RB1|5925|retinoblastoma 1##BC039373|LPAR6|10161|lysophosphatidic acid receptor 6##BC045651|LPAR6|10161|lysophosphatidic acid receptor 6##NM_005767|LPAR6|10161|lysophosphatidic acid receptor 6##AK122856|LPAR6|10161|lysophosphatidic acid receptor 6##NM_001162497|LPAR6|10161|lysophosphatidic acid receptor 6##BC029052|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK298438|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK301516|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK304598|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK310081|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK315703|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##NM_001268|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	0.0	
chr1	47088223	47088379	reg1028587.p1	4.108	+	TSC_hg19_v1_chr1_-_47082556 NM_201403	-5756	-	TSC_hg19_v1_chr1_-_47082508 AK304005	-5789	-	BC121169 BC026078 NM_145279	-7503	-	AK310338 AK301874 AK302090 NM_001243728	43233	-	TSC_hg19_v1_chr1_-_47134037 EU831493 EU831580 BC018781 BC071731 BC008498 AK026004	45708	-	TSC_hg19_v1_chr1_-_47134060 NM_001042546 NM_022745	45862	-	NM_201403|MOB3C|148932|MOB kinase activator 3C##AK304005|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##BC121169|MOB3C|148932|MOB kinase activator 3C##BC026078|MOB3C|148932|MOB kinase activator 3C##NM_145279|MOB3C|148932|MOB kinase activator 3C##AK310338|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1##AK301874|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1##AK302090|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1##NM_001243728|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1##EU831493|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1##EU831580|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1##BC018781|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1##BC071731|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1##BC008498|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1##AK026004|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1##NM_001042546|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1##NM_022745|ATPAF1|64756|ATP synthase mitochondrial F1 complex assembly factor 1	0.015872	
chr14	92747283	92747378	reg1032156.p1	4.108	+	TSC_hg19_v1_chr14_+_92588315 BC060854 AK001912 AK001627 BC070095	-159004	+	TSC_hg19_v1_chr14_+_92588292 NM_017437	-159038	+	TSC_hg19_v1_chr14_-_92588066 BC104672 AB463916 HQ258048 BC126232 BC126234 NM_004545	-159222	-	AF520706 NM_153648	41594	+	AK295059 NM_153647	42206	+	NM_153646 AF520704 AF520705 BC069653	42846	+	BC060854|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##AK001912|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##AK001627|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##BC070095|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##NM_017437|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##BC104672|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##HQ258048|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##BC126232|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##BC126234|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##NM_004545|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##AF520706|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153648|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	0.010704	
chr16	11296444	11296559	reg1021824.p1	4.108	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-258058	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-260266	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-260335	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	53549	-	X63758 BC096135 BC096136 BC096137 NM_005425	66637	-	NM_021247	70950	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.067717	
chr17	4265652	4265784	reg1035144.p2	4.108	+	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	-98567	-	TSC_hg19_v1_chr17_+_4046995 AK313088 AK172844 BC020263 CU690822 DQ891696 DQ894877	-218709	+	TSC_hg19_v1_chr17_+_4046490 NM_144611 BC051697	-219235	+	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	3993	-	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	4190	-	AK172832 NM_182538 TSC_hg19_v1_chr17_+_4337247 BC023646	71524	+	AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK313088|CYB5D2|124936|cytochrome b5 domain containing 2##AK172844|CYB5D2|124936|cytochrome b5 domain containing 2##BC020263|CYB5D2|124936|cytochrome b5 domain containing 2##DQ891696|CYB5D2|124936|cytochrome b5 domain containing 2##DQ894877|CYB5D2|124936|cytochrome b5 domain containing 2##NM_144611|CYB5D2|124936|cytochrome b5 domain containing 2##BC051697|CYB5D2|124936|cytochrome b5 domain containing 2##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AK172832|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_182538|SPNS3|201305|spinster homolog 3 (Drosophila)##BC023646|SPNS3|201305|spinster homolog 3 (Drosophila)	0.701117	CTCF.p2:-4:0.701
chr18	59561606	59561748	reg1033710.p2	4.108	+	AK096495 NM_173557	-1374	-	AF217289 BC101047 BC101048 BC101049 NM_031891	-403903	+	AK314130 NM_005912	-1521677	-	AF109219 TSC_hg19_v1_chr18_-_59854208	292517	-	TSC_hg19_v1_chr18_-_59854227 BC028363	292544	-	TSC_hg19_v1_chr18_-_59854258 AK315134	292566	-	AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##BC028363|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##AK315134|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.0	
chr19	40169374	40169481	reg1022717.p1	4.108	+	FJ613352 NM_001190441	-22882	+	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	-76242	+	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	-138607	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	25616	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	59212	-	NM_001143832	97806	+	FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##NM_001143832|LEUTX|342900|leucine twenty homeobox	0.0	
chr2	28642289	28642400	reg1033462.p1	4.108	+	TSC_hg19_v1_chr2_+_28616369 AK315415 X16706 AB528427 CU692714 DQ893428 DQ896743 CR542262	-25871	+	TSC_hg19_v1_chr2_+_28616346 BC022791	-25994	+	TSC_hg19_v1_chr2_+_28615779 NM_005253	-26562	+	BC150633 NM_001170585 NM_153021 BC153864	76617	+	TSC_hg19_v1_chr2_+_28824770 BC042674	182439	+	TSC_hg19_v1_chr2_+_28974719 AK303682 AK295957 AK316532 NM_206876 NM_002709 BX647970 AK312329 BX647295 X80910	332330	+	AK315415|FOSL2|2355|FOS-like antigen 2##X16706|FOSL2|2355|FOS-like antigen 2##DQ893428|FOSL2|2355|FOS-like antigen 2##DQ896743|FOSL2|2355|FOS-like antigen 2##CR542262|FOSL2|2355|FOS-like antigen 2##BC022791|FOSL2|2355|FOS-like antigen 2##NM_005253|FOSL2|2355|FOS-like antigen 2##BC150633|PLB1|151056|phospholipase B1##NM_001170585|PLB1|151056|phospholipase B1##NM_153021|PLB1|151056|phospholipase B1##BC153864|PLB1|151056|phospholipase B1##BC042674|PLB1|151056|phospholipase B1##AK303682|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK295957|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK316532|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_206876|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_002709|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647970|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK312329|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647295|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##X80910|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme	0.377005	CTCF.p2:27:0.377
chr2	3258638	3258704	reg1034346.p2	4.108	+	TSC_hg19_v1_chr2_-_2335085 AK307797	-923587	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	-923706	-	BC031690 TSC_hg19_v1_chr2_-_1946938	-1311765	-	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	122885	-	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	124834	+	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	264627	-	AK307797|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1	0.0	
chr3	4535024	4535133	reg1033221.p1	4.108	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-47	+	TSC_hg19_v1_chr3_-_4508955 NM_001164674 NM_001164675 NM_182760	-26115	-	AK295240 TSC_hg19_v1_chr3_-_4508953 BC121122 BC121123	-26126	-	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	50	+	TSC_hg19_v1_chr3_+_4535164 BC144563	118	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	486038	+	NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001164674|SUMF1|285362|sulfatase modifying factor 1##NM_001164675|SUMF1|285362|sulfatase modifying factor 1##NM_182760|SUMF1|285362|sulfatase modifying factor 1##AK295240|SUMF1|285362|sulfatase modifying factor 1##BC121122|SUMF1|285362|sulfatase modifying factor 1##BC121123|SUMF1|285362|sulfatase modifying factor 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40	0.0	
chr6	106615354	106615487	reg1034392.p2	4.108	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	-68616	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	-81185	+	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	-81224	+	BC002699 TSC_hg19_v1_chr6_-_106773313	157888	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	158112	-	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	158243	-	AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	0.0	
chr9	93518377	93518454	reg1000291.p2	4.108	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	-113296	-	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-1298434	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-1405408	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	45621	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	45652	+	TSC_hg19_v1_chr9_+_93564079 L28824	45663	+	BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase##L28824|SYK|6850|spleen tyrosine kinase	0.0	
chr10	11720269	11720424	reg1029802.p2	4.107	+	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	-66710	-	NM_001080491	-146073	-	TSC_hg19_v1_chr10_+_11207490 AK295511	-512854	+	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	64052	+	TSC_hg19_v1_chr10_+_11865354 BC017269 BC048800 NM_153256	145012	+	AK056703 TSC_hg19_v1_chr10_-_11936707	216356	-	AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK295511|CELF2|10659|CUGBP, Elav-like family member 2##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC017269|C10orf47|254427|chromosome 10 open reading frame 47##BC048800|C10orf47|254427|chromosome 10 open reading frame 47##NM_153256|C10orf47|254427|chromosome 10 open reading frame 47##AK056703|LOC219731|219731|uncharacterized LOC219731	0.0	
chr1	230258956	230259132	reg1033566.p1	4.107	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-56048	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-56102	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-497030	+	BC150638 NM_024554	254346	-	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	519152	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	519189	+	AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2	0.0	
chr12	38197240	38197360	reg1034756.p1	4.107	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-4021827	+	TSC_hg19_v1_chr12_+_34175402 BC022336	-4021914	+	AJ312278 NM_032834	-4022085	+	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	513325	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	1102083	-	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	1639699	-	BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC022336|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AJ312278|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_032834|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A	0.0	
chr17	9480616	9480723	reg1029253.p2	4.107	+	NM_001080556 NM_145054 AK074435 AB065281 BC025392 AK094847 AK315679 CU692990	-692	+	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	-1463	-	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	-1538	-	BC136368 BC144041 BC171759 AJ583817 NM_153210	68232	+	BC147024 BC147025 BC171909 NM_001105571 NM_001220493	213944	-	AF105367 BC096261 BC096262 BC096264 NM_004246 BC096263	248713	+	NM_001080556|WDR16|146845|WD repeat domain 16##NM_145054|WDR16|146845|WD repeat domain 16##AK074435|WDR16|146845|WD repeat domain 16##AB065281|WDR16|146845|WD repeat domain 16##BC025392|WDR16|146845|WD repeat domain 16##AK094847|WDR16|146845|WD repeat domain 16##AK315679|WDR16|146845|WD repeat domain 16##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8##BC136368|USP43|124739|ubiquitin specific peptidase 43##BC144041|USP43|124739|ubiquitin specific peptidase 43##BC171759|USP43|124739|ubiquitin specific peptidase 43##AJ583817|USP43|124739|ubiquitin specific peptidase 43##NM_153210|USP43|124739|ubiquitin specific peptidase 43##BC147024|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##BC147025|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##BC171909|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##NM_001105571|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##NM_001220493|DHRS7C|201140|dehydrogenase/reductase (SDR family) member 7C##AF105367|GLP2R|9340|glucagon-like peptide 2 receptor##BC096261|GLP2R|9340|glucagon-like peptide 2 receptor##BC096262|GLP2R|9340|glucagon-like peptide 2 receptor##BC096264|GLP2R|9340|glucagon-like peptide 2 receptor##NM_004246|GLP2R|9340|glucagon-like peptide 2 receptor##BC096263|GLP2R|9340|glucagon-like peptide 2 receptor	0.595699	CTCF.p2:-3:0.596
chr21	46162478	46162573	reg1028490.p1	4.107	+	BC115414 BC115415 AJ487962 NM_144991	-31048	-	AB076364 BC137339 BC137341 NM_198699	-45439	+	AB076363 BC127648 BC119713 BC120942 AJ566388 NM_181686	-60458	-	BT006914 AB590900 TSC_hg19_v1_chr21_-_46221720 AF032456 BC008351 BC054341 BC001738 AL355686 BC011569 AK290629 NM_001202489 NM_003343 NM_182688	59191	-	BT007008 CR542173 CR542188 CU674002 AB528029 TSC_hg19_v1_chr21_-_46237965	75398	-	TSC_hg19_v1_chr21_-_46237967 BC000036 X99584	75443	-	BC115414|TSPEAR|54084|thrombospondin-type laminin G domain and EAR repeats##BC115415|TSPEAR|54084|thrombospondin-type laminin G domain and EAR repeats##AJ487962|TSPEAR|54084|thrombospondin-type laminin G domain and EAR repeats##NM_144991|TSPEAR|54084|thrombospondin-type laminin G domain and EAR repeats##AB076364|KRTAP10-12|386685|keratin associated protein 10-12##BC137339|KRTAP10-12|386685|keratin associated protein 10-12##BC137341|KRTAP10-12|386685|keratin associated protein 10-12##NM_198699|KRTAP10-12|386685|keratin associated protein 10-12##AB076363|KRTAP12-1|353332|keratin associated protein 12-1##BC127648|KRTAP12-1|353332|keratin associated protein 12-1##BC119713|KRTAP12-1|353332|keratin associated protein 12-1##BC120942|KRTAP12-1|353332|keratin associated protein 12-1##AJ566388|KRTAP12-1|353332|keratin associated protein 12-1##NM_181686|KRTAP12-1|353332|keratin associated protein 12-1##BT006914|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##AF032456|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BC008351|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BC054341|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BC001738|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BC011569|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##AK290629|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##NM_001202489|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##NM_003343|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##NM_182688|UBE2G2|7327|ubiquitin-conjugating enzyme E2G 2##BT007008|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##CR542173|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##CR542188|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##BC000036|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)##X99584|SUMO3|6612|SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)	0.358629	CTCF.p2:17:0.359
chr2	89530883	89530981	reg1024835.p1	4.107	+	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-17699	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-88343	-	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	-238519	-	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	88921	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	546822	+	TSC_hg19_v1_chr2_+_90211706 Z69013	680786	+	BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC070334|IGKC|3514|immunoglobulin kappa constant	0.829182	CTCF.p2:36:0.829
chr7	101151202	101151300	reg1033130.p1	4.107	+	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	-145034	+	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	-186213	-	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-255685	-	BC002778 NM_138403	121324	-	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	307958	+	M74099 NM_181552	309630	+	NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1	1.05823	CTCF.p2:-20:0.999
chr7	24611979	24612159	reg1032498.p1	4.107	+	BC029497 NM_000905 AK312156 K01911 M15789	-288226	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-862153	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	-892246	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	1019	+	TSC_hg19_v1_chr7_-_24797042 BC099911	184968	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	184998	-	BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5	0.0	
chrX	153818833	153818928	reg1035057.p2	4.107	+	NM_001327 NM_139250 U87459 BC130362 BC130364 AJ003149 AJ275978	-5398	+	AF261086 NM_003639 AF091453	-42783	+	BC000299 TSC_hg19_v1_chrX_+_153775876 AK000593 BC046922 AF062089	-43011	+	AJ275978 AJ003149 BC130362 BC130364 NM_001327 NM_139250 U87459	28575	-	AJ012833 AM393026 AM393495 AM393696 AM393839 AB463462 BC002833 BC113998 BC114933 BC128045 AJ223041 AY679088 AY679089 AJ012834 AJ012835 AJ223040 NM_020994 NM_172377	62924	-	TSC_hg19_v1_chrX_-_153979326 AB463697 AK126283 AY057989 NM_001081573 NM_080612 AK307927	160417	-	NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AF261086|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##NM_003639|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AF091453|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC000299|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AK000593|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##BC046922|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AF062089|IKBKG|8517|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma##AJ275978|CTAG1B|1485|cancer/testis antigen 1B##AJ003149|CTAG1B|1485|cancer/testis antigen 1B##BC130362|CTAG1B|1485|cancer/testis antigen 1B##BC130364|CTAG1B|1485|cancer/testis antigen 1B##NM_001327|CTAG1B|1485|cancer/testis antigen 1B##NM_139250|CTAG1A|246100|cancer/testis antigen 1A##U87459|CTAG1B|1485|cancer/testis antigen 1B##AJ012833|CTAG2|30848|cancer/testis antigen 2##AM393026|CTAG2|30848|cancer/testis antigen 2##AM393495|CTAG2|30848|cancer/testis antigen 2##AM393696|CTAG2|30848|cancer/testis antigen 2##AM393839|CTAG2|30848|cancer/testis antigen 2##BC002833|CTAG2|30848|cancer/testis antigen 2##BC113998|CTAG2|30848|cancer/testis antigen 2##BC114933|CTAG2|30848|cancer/testis antigen 2##BC128045|CTAG2|30848|cancer/testis antigen 2##AJ223041|CTAG2|30848|cancer/testis antigen 2##AY679088|CTAG2|30848|cancer/testis antigen 2##AY679089|CTAG2|30848|cancer/testis antigen 2##AJ012834|CTAG2|30848|cancer/testis antigen 2##AJ012835|CTAG2|30848|cancer/testis antigen 2##AJ223040|CTAG2|30848|cancer/testis antigen 2##NM_020994|CTAG2|30848|cancer/testis antigen 2##NM_172377|CTAG2|30848|cancer/testis antigen 2##AK126283|GAB3|139716|GRB2-associated binding protein 3##AY057989|GAB3|139716|GRB2-associated binding protein 3##NM_001081573|GAB3|139716|GRB2-associated binding protein 3##NM_080612|GAB3|139716|GRB2-associated binding protein 3##AK307927|GAB3|139716|GRB2-associated binding protein 3	0.174746	
chr10	125785578	125785700	reg1004123.p2	4.106	+	BC137492 BC146862 AY358565 NM_198148	-134143	-	AJ505757 NM_153442 BC112011 BC113462	-359762	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-871283	+	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	66260	-	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	67514	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	321834	-	BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase	0.010716	
chr12	121235838	121235944	reg1032329.p1	4.106	+	NM_000017 TSC_hg19_v1_chr12_+_121163641 BC025963 AK300645 M26393 DQ892184 DQ895378 CU693082 AB527081	-72262	+	TSC_hg19_v1_chr12_+_121148260 AK126367 BC070088	-87618	+	NM_001080533	-88061	+	AK074916 TSC_hg19_v1_chr12_-_121248688	12792	-	AY169313 TSC_hg19_v1_chr12_-_121341927 BC073910 AK291161	106073	-	TSC_hg19_v1_chr12_-_121342070 AK223590 NM_139015	106243	-	NM_000017|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##BC025963|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AK300645|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##M26393|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##DQ892184|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##DQ895378|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AB527081|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AK126367|UNC119B|84747|unc-119 homolog B (C. elegans)##BC070088|UNC119B|84747|unc-119 homolog B (C. elegans)##NM_001080533|UNC119B|84747|unc-119 homolog B (C. elegans)##AK074916|SPPL3|121665|signal peptide peptidase-like 3##AY169313|SPPL3|121665|signal peptide peptidase-like 3##BC073910|SPPL3|121665|signal peptide peptidase-like 3##AK291161|SPPL3|121665|signal peptide peptidase-like 3##AK223590|SPPL3|121665|signal peptide peptidase-like 3##NM_139015|SPPL3|121665|signal peptide peptidase-like 3	0.841724	CTCF.p2:-3:0.842
chr1	234636907	234637039	reg1034733.p2	4.106	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	-22113	-	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	-127601	+	TSC_hg19_v1_chr1_+_234350005 BC037878	-286967	+	TSC_hg19_v1_chr1_-_234743489 BC020516	106553	-	TSC_hg19_v1_chr1_-_234743841 AK299768	106858	-	TSC_hg19_v1_chr1_-_234743861 AK309579	106885	-	NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##BC037878|SLC35F3|148641|solute carrier family 35, member F3##BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2	0.034246	
chr1	235246839	235247020	reg1004319.p2	4.106	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-351155	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-501683	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-503071	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	45160	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	45302	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	77634	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr12	95928178	95928263	reg1004907.p1	4.106	+	NM_006838 AK300836 TSC_hg19_v1_chr12_+_95867927 AK315559 U13261 AK055692 U29607 BC013782 AK091730 AX747149 AB463882 DQ891013 DQ894193	-60323	+	TSC_hg19_v1_chr12_+_95676175 AL133113	-252002	+	TSC_hg19_v1_chr12_+_95611582 NM_017599 AK001338 AK225303 AK309943 AK225356 BC014443 AK307864 AL137497 BC064939 BC028597	-316526	+	AK027434 TSC_hg19_v1_chr12_-_95942575 BC030704 NM_001042403	14394	-	AL136825 NM_032147	17024	-	TSC_hg19_v1_chr12_-_96184346 AF297711 AK226070 AK315796	256149	-	NM_006838|METAP2|10988|methionyl aminopeptidase 2##AK300836|METAP2|10988|methionyl aminopeptidase 2##AK315559|METAP2|10988|methionyl aminopeptidase 2##U13261|METAP2|10988|methionyl aminopeptidase 2##AK055692|METAP2|10988|methionyl aminopeptidase 2##BC013782|METAP2|10988|methionyl aminopeptidase 2##AK091730|METAP2|10988|methionyl aminopeptidase 2##DQ891013|METAP2|10988|methionyl aminopeptidase 2##DQ894193|METAP2|10988|methionyl aminopeptidase 2##AL133113|VEZT|55591|vezatin, adherens junctions transmembrane protein##NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein##AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK027434|USP44|84101|ubiquitin specific peptidase 44##BC030704|USP44|84101|ubiquitin specific peptidase 44##NM_001042403|USP44|84101|ubiquitin specific peptidase 44##AL136825|USP44|84101|ubiquitin specific peptidase 44##NM_032147|USP44|84101|ubiquitin specific peptidase 44##AF297711|NTN4|59277|netrin 4##AK226070|NTN4|59277|netrin 4##AK315796|NTN4|59277|netrin 4	0.0	
chr15	91475774	91475885	reg1022085.p3	4.106	+	TSC_hg19_v1_chr15_-_91475772 CU689746 NM_198527 BC033794 AK057584	-93	-	AK125721 BC045635 NM_001039675	-2420	+	BC136448 BC144111 NM_006122	-28410	+	NM_018671	2385	+	AK302979 TSC_hg19_v1_chr15_+_91478514 AK296964 AK291622	2677	+	TSC_hg19_v1_chr15_+_91478521 AB014729 AB014736 BC006214	2698	+	NM_198527|HDDC3|374659|HD domain containing 3##BC033794|HDDC3|374659|HD domain containing 3##AK057584|HDDC3|374659|HD domain containing 3##AK125721|UNC45A|55898|unc-45 homolog A (C. elegans)##BC045635|UNC45A|55898|unc-45 homolog A (C. elegans)##NM_001039675|UNC45A|55898|unc-45 homolog A (C. elegans)##BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##NM_018671|UNC45A|55898|unc-45 homolog A (C. elegans)##AK302979|UNC45A|55898|unc-45 homolog A (C. elegans)##AK296964|UNC45A|55898|unc-45 homolog A (C. elegans)##AK291622|UNC45A|55898|unc-45 homolog A (C. elegans)##AB014729|UNC45A|55898|unc-45 homolog A (C. elegans)##AB014736|UNC45A|55898|unc-45 homolog A (C. elegans)##BC006214|UNC45A|55898|unc-45 homolog A (C. elegans)	0.449244	CTCF.p2:3:0.449
chr3	169755393	169755548	reg1008750.p1	4.106	+	TSC_hg19_v1_chr3_+_169684598 NM_003262 AK294504 BC003677 BC007040 BC012035 BX648539 D87127 U93239 EU832302 EU832386	-70882	+	BX648991 BX648534 BX648989 BX537903 NM_182610	-126050	+	HQ258307 BC117401 BC143569 BC143582 AY358138 AK097338 NM_024727 AK026912	-167813	-	TSC_hg19_v1_chr3_+_169755748 NM_014373	284	+	TSC_hg19_v1_chr3_+_169755782 BC000181	320	+	TSC_hg19_v1_chr3_+_169755984 AK311293	482	+	NM_003262|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC003677|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC007040|SEC62|7095|SEC62 homolog (S. cerevisiae)##BC012035|SEC62|7095|SEC62 homolog (S. cerevisiae)##BX648539|SEC62|7095|SEC62 homolog (S. cerevisiae)##D87127|SEC62|7095|SEC62 homolog (S. cerevisiae)##U93239|SEC62|7095|SEC62 homolog (S. cerevisiae)##EU832302|SEC62|7095|SEC62 homolog (S. cerevisiae)##EU832386|SEC62|7095|SEC62 homolog (S. cerevisiae)##BX648991|SAMD7|344658|sterile alpha motif domain containing 7##BX648534|SAMD7|344658|sterile alpha motif domain containing 7##BX648989|SAMD7|344658|sterile alpha motif domain containing 7##BX537903|SAMD7|344658|sterile alpha motif domain containing 7##NM_182610|SAMD7|344658|sterile alpha motif domain containing 7##HQ258307|LRRC31|79782|leucine rich repeat containing 31##BC117401|LRRC31|79782|leucine rich repeat containing 31##BC143569|LRRC31|79782|leucine rich repeat containing 31##BC143582|LRRC31|79782|leucine rich repeat containing 31##AY358138|LRRC31|79782|leucine rich repeat containing 31##AK097338|LRRC31|79782|leucine rich repeat containing 31##NM_024727|LRRC31|79782|leucine rich repeat containing 31##AK026912|LRRC31|79782|leucine rich repeat containing 31##NM_014373|GPR160|26996|G protein-coupled receptor 160##BC000181|GPR160|26996|G protein-coupled receptor 160##AK311293|GPR160|26996|G protein-coupled receptor 160	0.0	
chr5	102922981	102923112	reg1040314.p1	4.106	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-24565	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-328589	+	BC024591 NM_015216 AB463068	-457772	+	AK308672 NM_001962 U26403	4083544	-	TSC_hg19_v1_chr5_-_107717106 AK126722	4794084	-	BC063316 NM_001163315	4794752	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.384138	CTCF.p2:2:0.384
chrX	135291601	135291694	reg1030928.p1	4.106	+	NM_001159701 AK301642 NM_001159699 TSC_hg19_v1_chrX_+_135279205 AK299381 AK299379 AK299450 BC088369 EU832162 EU832256	-12557	+	NM_001167819	-39852	+	AK122708 NM_001159704	-40193	+	TSC_hg19_v1_chrX_-_135333531 AL832120 BC064350 BC040518 NM_001173517 NM_024597	41981	-	AK301478 NM_001173516	46993	-	AY882585 NM_153834	91474	+	NM_001159701|FHL1|2273|four and a half LIM domains 1##AK301642|FHL1|2273|four and a half LIM domains 1##NM_001159699|FHL1|2273|four and a half LIM domains 1##AK299381|FHL1|2273|four and a half LIM domains 1##AK299379|FHL1|2273|four and a half LIM domains 1##AK299450|FHL1|2273|four and a half LIM domains 1##BC088369|FHL1|2273|four and a half LIM domains 1##EU832162|FHL1|2273|four and a half LIM domains 1##EU832256|FHL1|2273|four and a half LIM domains 1##NM_001167819|FHL1|2273|four and a half LIM domains 1##AK122708|FHL1|2273|four and a half LIM domains 1##NM_001159704|FHL1|2273|four and a half LIM domains 1##AL832120|MAP7D3|79649|MAP7 domain containing 3##BC064350|MAP7D3|79649|MAP7 domain containing 3##BC040518|MAP7D3|79649|MAP7 domain containing 3##NM_001173517|MAP7D3|79649|MAP7 domain containing 3##NM_024597|MAP7D3|79649|MAP7 domain containing 3##AK301478|MAP7D3|79649|MAP7 domain containing 3##NM_001173516|MAP7D3|79649|MAP7 domain containing 3##AY882585|GPR112|139378|G protein-coupled receptor 112##NM_153834|GPR112|139378|G protein-coupled receptor 112	0.884974	CTCF.p2:-7:0.885
chr12	113608771	113608952	reg1038730.p1	4.105	+	AK308987 NM_001144872	-21257	+	AF086713 AB208935 AK294350 NM_001193520 NM_004658	-34830	-	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	-35449	-	BC005848 BC001132 BC001848 AY148094 TSC_hg19_v1_chr12_-_113623279 AF478457 NM_001111322 NM_024072	14386	-	AK075358 AK123762 AK027741 TSC_hg19_v1_chr12_+_113623525 AY007158 AK027733 NM_032848 AK222908	14612	+	TSC_hg19_v1_chr12_-_113658844 BC013151 NM_138451 AK127152	50001	-	NM_001144872|CCDC42B|387885|coiled-coil domain containing 42B##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC005848|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##BC001132|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##BC001848|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AY148094|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AF478457|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_001111322|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_024072|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AK075358|C12orf52|84934|chromosome 12 open reading frame 52##AK123762|C12orf52|84934|chromosome 12 open reading frame 52##AK027741|C12orf52|84934|chromosome 12 open reading frame 52##AY007158|C12orf52|84934|chromosome 12 open reading frame 52##AK027733|C12orf52|84934|chromosome 12 open reading frame 52##NM_032848|C12orf52|84934|chromosome 12 open reading frame 52##AK222908|C12orf52|84934|chromosome 12 open reading frame 52##BC013151|IQCD|115811|IQ motif containing D##NM_138451|IQCD|115811|IQ motif containing D##AK127152|IQCD|115811|IQ motif containing D	0.0	
chr14	92981668	92981767	reg1033344.p2	4.105	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-1758	+	NM_153646 AF520704 AF520705 BC069653	-191541	+	AK295059 NM_153647	-192181	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	136919	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	137106	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	233242	-	AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain	0.0	
chr19	51876010	51876173	reg1031576.p1	4.105	+	DQ895942 EU176419 BC015759 TSC_hg19_v1_chr19_-_51875909 NM_005601 S69115	-212	-	BC029518 NM_152353	-3835	-	TSC_hg19_v1_chr19_-_51869643 NM_001985	-6439	-	BC074916 BC074917 BC126139 AF340019 BC069430 AF340020 NM_001161748 NM_030657	15106	-	TSC_hg19_v1_chr19_-_51893838 BC085012 BC143997 BC043532 NM_001193623	17734	-	TSC_hg19_v1_chr19_-_51920897 AK289900 AF310233 AY358337 AK290542 AK294185 AK303514 AK303717 BC101725 BC143497 BC143500 AF301007 AK292025 AK308982 AY032685 AF311905 NM_001171156 NM_001171157 NM_001171158 NM_001171159 NM_001171160 NM_001171161 NM_033130	44857	-	DQ895942|NKG7|4818|natural killer cell group 7 sequence##EU176419|NKG7|4818|natural killer cell group 7 sequence##BC015759|NKG7|4818|natural killer cell group 7 sequence##NM_005601|NKG7|4818|natural killer cell group 7 sequence##S69115|NKG7|4818|natural killer cell group 7 sequence##BC029518|CLDND2|125875|claudin domain containing 2##NM_152353|CLDND2|125875|claudin domain containing 2##NM_001985|ETFB|2109|electron-transfer-flavoprotein, beta polypeptide##BC074916|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC074917|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC126139|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340019|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC069430|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##AF340020|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_001161748|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##NM_030657|LIM2|3982|lens intrinsic membrane protein 2, 19kDa##BC085012|LOC147646|147646|uncharacterized LOC147646##BC043532|LOC147646|147646|uncharacterized LOC147646##NM_001193623|LOC147646|147646|uncharacterized LOC147646##AK289900|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF310233|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY358337|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK290542|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK294185|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303514|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK303717|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC101725|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143497|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##BC143500|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF301007|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK292025|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AK308982|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AY032685|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##AF311905|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171156|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171157|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171158|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171159|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171160|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_001171161|SIGLEC10|89790|sialic acid binding Ig-like lectin 10##NM_033130|SIGLEC10|89790|sialic acid binding Ig-like lectin 10	0.0	
chr20	46102358	46102469	reg1028434.p1	4.105	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-116925	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-125766	-	TSC_hg19_v1_chr20_-_45927496 BC030721	-174844	-	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	28209	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	28271	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	312339	-	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2	0.0	
chr2	61107888	61107979	reg1022398.p1	4.105	+	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	-124449	+	AF080216 TSC_hg19_v1_chr2_-_60780784	-327155	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	-327411	-	TSC_hg19_v1_chr2_+_61108702 AK303926	772	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	804	+	TSC_hg19_v1_chr2_+_61108776 BC143885 BC117191 X75042	854	+	NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC143885|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC117191|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##X75042|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)	0.0	
chr3	156851109	156851224	reg1029278.p1	4.105	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-307055	+	BC034397 NM_001184718	-456714	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-457751	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	26743	-	NM_020307 AK122738	27348	-	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	303484	+	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long	0.112497	
chr3	52479089	52479170	reg1030355.p1	4.105	+	AB029496 BC098104 BC098137 BC099724 NM_020163 TSC_hg19_v1_chr3_-_52479120	-32	-	AY014283 TSC_hg19_v1_chr3_+_52445005	-34147	+	TSC_hg19_v1_chr3_+_52444675 BC022002 AK292221	-34453	+	CR541865 CR541885 DQ891026 DQ894206 AF020769 TSC_hg19_v1_chr3_-_52488058 BC030244 AK313743 NM_003280 X07897	8925	-	TSC_hg19_v1_chr3_+_52489516 NM_007184	10384	+	TSC_hg19_v1_chr3_+_52489645 AK297657 AK315001 BC038102 AK291398 BC054494 AF082516 BC050552 AK027428	10502	+	AB029496|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##BC098104|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##BC098137|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##BC099724|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##NM_020163|SEMA3G|56920|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G##AY014283|PHF7|51533|PHD finger protein 7##BC022002|PHF7|51533|PHD finger protein 7##AK292221|PHF7|51533|PHD finger protein 7##CR541865|TNNC1|7134|troponin C type 1 (slow)##CR541885|TNNC1|7134|troponin C type 1 (slow)##DQ891026|TNNC1|7134|troponin C type 1 (slow)##DQ894206|TNNC1|7134|troponin C type 1 (slow)##AF020769|TNNC1|7134|troponin C type 1 (slow)##BC030244|TNNC1|7134|troponin C type 1 (slow)##AK313743|TNNC1|7134|troponin C type 1 (slow)##NM_003280|TNNC1|7134|troponin C type 1 (slow)##X07897|TNNC1|7134|troponin C type 1 (slow)##NM_007184|NISCH|11188|nischarin##AK297657|NISCH|11188|nischarin##AK315001|NISCH|11188|nischarin##BC038102|NISCH|11188|nischarin##AK291398|NISCH|11188|nischarin##BC054494|NISCH|11188|nischarin##AF082516|NISCH|11188|nischarin##BC050552|NISCH|11188|nischarin##AK027428|NISCH|11188|nischarin	0.0	
chr4	71814745	71814855	reg1035584.p1	4.105	+	NM_001244766 NM_001244767 NM_173468 AK093545 AX748194 TSC_hg19_v1_chr4_+_71768085 AK299481 BC038112 AK313513	-46687	+	TSC_hg19_v1_chr4_-_71705615 NM_002092 AK296287	-109163	-	TSC_hg19_v1_chr4_-_71705608 U07231 AK127161 AK090755 AK055499 AK056891 AK095799 AK097055 AK124124 BC040485	-109223	-	TSC_hg19_v1_chr4_+_71859320 NM_000788 AK303292 AK313523 BC103764	44507	+	M60527 TSC_hg19_v1_chr4_+_71859434 BC114617 JF806429 BT019941 BT019942 CR536527 CR541876	44671	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	237923	+	NM_001244766|MOB1B|92597|MOB kinase activator 1B##NM_001244767|MOB1B|92597|MOB kinase activator 1B##NM_173468|MOB1B|92597|MOB kinase activator 1B##AK093545|MOB1B|92597|MOB kinase activator 1B##AK299481|MOB1B|92597|MOB kinase activator 1B##BC038112|MOB1B|92597|MOB kinase activator 1B##AK313513|MOB1B|92597|MOB kinase activator 1B##NM_002092|GRSF1|2926|G-rich RNA sequence binding factor 1##AK296287|GRSF1|2926|G-rich RNA sequence binding factor 1##U07231|GRSF1|2926|G-rich RNA sequence binding factor 1##AK127161|GRSF1|2926|G-rich RNA sequence binding factor 1##AK090755|GRSF1|2926|G-rich RNA sequence binding factor 1##AK055499|GRSF1|2926|G-rich RNA sequence binding factor 1##AK056891|GRSF1|2926|G-rich RNA sequence binding factor 1##AK095799|GRSF1|2926|G-rich RNA sequence binding factor 1##AK097055|GRSF1|2926|G-rich RNA sequence binding factor 1##AK124124|GRSF1|2926|G-rich RNA sequence binding factor 1##BC040485|GRSF1|2926|G-rich RNA sequence binding factor 1##NM_000788|DCK|1633|deoxycytidine kinase##AK303292|DCK|1633|deoxycytidine kinase##AK313523|DCK|1633|deoxycytidine kinase##BC103764|DCK|1633|deoxycytidine kinase##M60527|DCK|1633|deoxycytidine kinase##BC114617|DCK|1633|deoxycytidine kinase##JF806429|DCK|1633|deoxycytidine kinase##BT019941|DCK|1633|deoxycytidine kinase##BT019942|DCK|1633|deoxycytidine kinase##CR536527|DCK|1633|deoxycytidine kinase##CR541876|DCK|1633|deoxycytidine kinase##AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	0.322507	CTCF.p2:7:0.323
chr6	157342555	157342736	reg1031519.p1	4.105	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-242770	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-243361	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-243420	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	401939	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	402572	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	459894	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	0.47151	CTCF.p2:-51:0.472
chr7	100076708	100076873	reg1034832.p1	4.105	+	BC031966 NM_001004323	-14897	-	TSC_hg19_v1_chr7_-_100034098 BC026269 NM_145030	-42713	-	TSC_hg19_v1_chr7_+_100027484 AK291366 BC000556 BC018935	-49261	+	BC001966 BC031622 AK314824 TSC_hg19_v1_chr7_-_100076802 BC002972 BC010406 AK296580 AK297702 AK310800 BC001486 NM_030935	37	-	AK124773 NM_173564	4759	+	TSC_hg19_v1_chr7_+_100136826 NM_006076 BC009393	60021	+	BC031966|C7orf61|402573|chromosome 7 open reading frame 61##NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61##BC026269|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##NM_145030|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##AK291366|MEPCE|56257|methylphosphate capping enzyme##BC000556|MEPCE|56257|methylphosphate capping enzyme##BC018935|MEPCE|56257|methylphosphate capping enzyme##BC001966|TSC22D4|81628|TSC22 domain family, member 4##BC031622|TSC22D4|81628|TSC22 domain family, member 4##AK314824|TSC22D4|81628|TSC22 domain family, member 4##BC002972|TSC22D4|81628|TSC22 domain family, member 4##BC010406|TSC22D4|81628|TSC22 domain family, member 4##AK296580|TSC22D4|81628|TSC22 domain family, member 4##AK297702|TSC22D4|81628|TSC22 domain family, member 4##BC001486|TSC22D4|81628|TSC22 domain family, member 4##NM_030935|TSC22D4|81628|TSC22 domain family, member 4##AK124773|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_173564|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_006076|AGFG2|3268|ArfGAP with FG repeats 2##BC009393|AGFG2|3268|ArfGAP with FG repeats 2	0.0	
chr8	41480547	41480626	reg1025687.p1	4.105	+	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	-44892	+	TSC_hg19_v1_chr8_+_41386779 AK095334 AK313373	-93814	+	NM_032336 AK299207 BC027454 TSC_hg19_v1_chr8_+_41386745 BC005995	-93849	+	AB587362 AK057898 NM_152568	24289	-	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	42177	-	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	174554	-	NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AK095334|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK313373|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##NM_032336|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK299207|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC027454|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC005995|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic##M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic	0.219047	CTCF.p2:17:0.207
chr11	35028370	35028540	reg1031048.p1	4.104	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-90298	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-90566	-	NM_001135024 NM_001166158 NM_003477	-90779	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	131945	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	132279	+	TSC_hg19_v1_chr11_+_35160821 M59040	132363	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr12	11989580	11989692	reg1034501.p1	4.104	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-186650	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-186862	+	TSC_hg19_v1_chr12_+_11802659 AK289441	-186963	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	234247	+	AF281254 AF281255 NM_030766 NM_138722	234765	+	AK074543 TSC_hg19_v1_chr12_-_12291395	301748	-	U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AK289441|ETV6|2120|ets variant 6##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6	0.0	
chr14	73386846	73386952	reg1032533.p1	4.104	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	-26091	-	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-987033	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-987746	+	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	6236	+	AK098542 AF311602 NM_178441	66758	-	AB046809 TSC_hg19_v1_chr14_-_73493815 AJ310569 AK027399 BC014902 BC053520 NM_021260	106932	-	AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AB046809|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AJ310569|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AK027399|ZFYVE1|53349|zinc finger, FYVE domain containing 1##BC014902|ZFYVE1|53349|zinc finger, FYVE domain containing 1##BC053520|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_021260|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.498975	CTCF.p2:24:0.499
chr1	51909856	51910037	reg1033744.p2	4.104	+	AK090936 AX746691 AK308128 BX647676 NM_001159969	-22180	-	AF007170 NM_001144832	-99208	-	TSC_hg19_v1_chr1_-_51796233 AK301587 AK000220	-113714	-	DQ367924 AB384758 BC054006 TSC_hg19_v1_chr1_-_51984939 AK129853 U07707 AK313396	74977	-	NM_001981 Z29064 TSC_hg19_v1_chr1_-_51985031	75078	-	NM_024586 NM_148906 NM_148908 NM_148909	172599	+	AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15##BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15##NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AF007170|TTC39A|22996|tetratricopeptide repeat domain 39A##NM_001144832|TTC39A|22996|tetratricopeptide repeat domain 39A##AK301587|TTC39A|22996|tetratricopeptide repeat domain 39A##AK000220|TTC39A|22996|tetratricopeptide repeat domain 39A##DQ367924|EPS15|2060|epidermal growth factor receptor pathway substrate 15##BC054006|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK129853|EPS15|2060|epidermal growth factor receptor pathway substrate 15##U07707|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK313396|EPS15|2060|epidermal growth factor receptor pathway substrate 15##NM_001981|EPS15|2060|epidermal growth factor receptor pathway substrate 15##Z29064|EPS15|2060|epidermal growth factor receptor pathway substrate 15##NM_024586|OSBPL9|114883|oxysterol binding protein-like 9##NM_148906|OSBPL9|114883|oxysterol binding protein-like 9##NM_148908|OSBPL9|114883|oxysterol binding protein-like 9##NM_148909|OSBPL9|114883|oxysterol binding protein-like 9	0.0	
chr16	2021964	2022108	reg1030426.p2	4.104	+	BC113014 NM_174903	-5162	+	AB055772 AK312173 BC066321 NM_002952 X17206 TSC_hg19_v1_chr16_-_2014830	-7208	-	AB082925 BC019021 BC007700 AB529037 CU677585 CU677775 CU680300 CU689286 DQ892445 DQ895656 BC001795 BC006559 BC008329 BC008862 BC010165 BC012354 BC013833 BC016178 BC016951 BC018993 BC021545 BC023541 BC025677 BC029979 BC032129 BC035427 BC052235 BC063011 BC071673 BC071922 BC071923 BC071924 BC073966 BC075830 BC106060 TSC_hg19_v1_chr16_-_2014765 AB065089 BC068051 BC105985 BC103756	-7375	-	TSC_hg19_v1_chr16_+_2022055 AK095076	12	+	TSC_hg19_v1_chr16_+_2022063 BC010231 NM_006453	26	+	TSC_hg19_v1_chr16_+_2022093 BC021563 AB209173 BC014007 BC035409 U02609 AB384871 CU679657 CU680738 CU690084	86	+	BC113014|RNF151|146310|ring finger protein 151##NM_174903|RNF151|146310|ring finger protein 151##AK312173|RPS2|6187|ribosomal protein S2##BC066321|RPS2|6187|ribosomal protein S2##NM_002952|RPS2|6187|ribosomal protein S2##X17206|RPS2|6187|ribosomal protein S2##AB082925|RPS2|6187|ribosomal protein S2##BC019021|RPS2|6187|ribosomal protein S2##DQ892445|RPS2|6187|ribosomal protein S2##DQ895656|RPS2|6187|ribosomal protein S2##BC001795|RPS2|6187|ribosomal protein S2##BC006559|RPS2|6187|ribosomal protein S2##BC008329|RPS2|6187|ribosomal protein S2##BC008862|RPS2|6187|ribosomal protein S2##BC010165|RPS2|6187|ribosomal protein S2##BC012354|RPS2|6187|ribosomal protein S2##BC013833|RPS2|6187|ribosomal protein S2##BC016178|RPS2|6187|ribosomal protein S2##BC016951|RPS2|6187|ribosomal protein S2##BC018993|RPS2|6187|ribosomal protein S2##BC021545|RPS2|6187|ribosomal protein S2##BC023541|RPS2|6187|ribosomal protein S2##BC025677|RPS2|6187|ribosomal protein S2##BC029979|RPS2|6187|ribosomal protein S2##BC032129|RPS2|6187|ribosomal protein S2##BC035427|RPS2|6187|ribosomal protein S2##BC052235|RPS2|6187|ribosomal protein S2##BC063011|RPS2|6187|ribosomal protein S2##BC071673|RPS2|6187|ribosomal protein S2##BC071922|RPS2|6187|ribosomal protein S2##BC071923|RPS2|6187|ribosomal protein S2##BC071924|RPS2|6187|ribosomal protein S2##BC073966|RPS2|6187|ribosomal protein S2##BC075830|RPS2|6187|ribosomal protein S2##BC106060|RPS2|6187|ribosomal protein S2##AB065089|RPS2|6187|ribosomal protein S2##BC068051|RPS2|6187|ribosomal protein S2##BC105985|RPS2|6187|ribosomal protein S2##BC103756|RPS2|6187|ribosomal protein S2##AK095076|TBL3|10607|transducin (beta)-like 3##BC010231|TBL3|10607|transducin (beta)-like 3##NM_006453|TBL3|10607|transducin (beta)-like 3##BC021563|TBL3|10607|transducin (beta)-like 3##AB209173|TBL3|10607|transducin (beta)-like 3##BC014007|TBL3|10607|transducin (beta)-like 3##BC035409|TBL3|10607|transducin (beta)-like 3##U02609|TBL3|10607|transducin (beta)-like 3	0.0	
chr16	27192460	27192577	reg1029790.p1	4.104	+	NM_001145545 BC031257 AK311574	-114271	+	AF105378 NM_006040	-1489172	+	TSC_hg19_v1_chr16_-_25269141 AK303472	-1923313	-	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	22309	+	AK297166 NM_001145348	22777	+	TSC_hg19_v1_chr16_-_27280055 AK315674	87534	-	NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5##AK315674|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)	0.0	
chr19	36231797	36231977	reg1035866.p2	4.104	+	TSC_hg19_v1_chr19_+_36209125 AF186605	-22701	+	TSC_hg19_v1_chr19_+_36208923 AJ007041 NM_014727	-22957	+	AF130255 NM_014383	-28058	+	BC126481 BC126483 BC144205 AX775837 AK026226 NM_024660	1443	-	AB528887 CU676860 DQ892422 DQ895636 BC062474 BC049208 AY569437 BC021186 TSC_hg19_v1_chr19_-_36236316 AK094213 AY461582 BC010865 AK311551 NM_001040425 NM_144987 AK303983	4429	-	TSC_hg19_v1_chr19_+_36236539 NM_172341 AF220053 BC009575 AK312233 BC008939	4632	+	AF186605|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##AF130255|ZBTB32|27033|zinc finger and BTB domain containing 32##NM_014383|ZBTB32|27033|zinc finger and BTB domain containing 32##BC126481|IGFLR1|79713|IGF-like family receptor 1##BC126483|IGFLR1|79713|IGF-like family receptor 1##BC144205|IGFLR1|79713|IGF-like family receptor 1##AX775837|IGFLR1|79713|IGF-like family receptor 1##AK026226|IGFLR1|79713|IGF-like family receptor 1##NM_024660|IGFLR1|79713|IGF-like family receptor 1##DQ892422|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##DQ895636|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##BC062474|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##BC049208|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##AY569437|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##BC021186|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##AK094213|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##AY461582|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##BC010865|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##NM_001040425|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##NM_144987|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##AK303983|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##NM_172341|PSENEN|55851|presenilin enhancer 2 homolog (C. elegans)##AF220053|PSENEN|55851|presenilin enhancer 2 homolog (C. elegans)##BC009575|PSENEN|55851|presenilin enhancer 2 homolog (C. elegans)##AK312233|PSENEN|55851|presenilin enhancer 2 homolog (C. elegans)	0.0	
chr19	44039758	44039902	reg1036047.p1	4.104	+	TSC_hg19_v1_chr19_+_44037567 BC043611 NM_174945 AK301820	-2318	+	TSC_hg19_v1_chr19_-_44031351 AM392804 AB463613 AK309880 BC008250 AK315346 D83198 NM_014297	-8469	-	BC029299 NM_198850 BC070094	-30795	-	CR456728 AB384718 BC023593 TSC_hg19_v1_chr19_-_44079680 AB208781	39818	-	AK293542 TSC_hg19_v1_chr19_-_44079716 AK300163 AK315332 NM_006297	39897	-	AK296854 NM_001193621	41121	+	BC043611|ZNF575|284346|zinc finger protein 575##NM_174945|ZNF575|284346|zinc finger protein 575##AK301820|ZNF575|284346|zinc finger protein 575##AM392804|ETHE1|23474|ethylmalonic encephalopathy 1##AK309880|ETHE1|23474|ethylmalonic encephalopathy 1##BC008250|ETHE1|23474|ethylmalonic encephalopathy 1##AK315346|ETHE1|23474|ethylmalonic encephalopathy 1##D83198|ETHE1|23474|ethylmalonic encephalopathy 1##NM_014297|ETHE1|23474|ethylmalonic encephalopathy 1##BC029299|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##NM_198850|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##BC070094|PHLDB3|653583|pleckstrin homology-like domain, family B, member 3##CR456728|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##BC023593|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##AB208781|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##AK293542|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##AK300163|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##AK315332|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##NM_006297|XRCC1|7515|X-ray repair complementing defective repair in Chinese hamster cells 1##AK296854|LOC390940|390940|uncharacterized protein ENSP00000244321##NM_001193621|LOC390940|390940|uncharacterized protein ENSP00000244321	0.949788	CTCF.p2:-17:0.950
chr2	158337389	158337478	reg1029116.p2	4.104	+	L06633 AB528875 CU690346 AF068836 BC036449 TSC_hg19_v1_chr2_-_158300602 AK312753 NM_004288	-36869	-	NM_001009959 AK296477	-153277	-	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	-155149	-	TSC_hg19_v1_chr2_-_158454049 AF525679 NM_001111031	116642	-	AB590288 CU692676 DQ895570 EU176205 AF525680 AF525681 AY127050 TSC_hg19_v1_chr2_-_158485239	147765	-	BC022530 NM_001111032 NM_001111033 NM_145259 TSC_hg19_v1_chr2_-_158485400	147964	-	L06633|CYTIP|9595|cytohesin 1 interacting protein##AF068836|CYTIP|9595|cytohesin 1 interacting protein##BC036449|CYTIP|9595|cytohesin 1 interacting protein##AK312753|CYTIP|9595|cytohesin 1 interacting protein##NM_004288|CYTIP|9595|cytohesin 1 interacting protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##AF525679|ACVR1C|130399|activin A receptor, type IC##NM_001111031|ACVR1C|130399|activin A receptor, type IC##DQ895570|ACVR1C|130399|activin A receptor, type IC##EU176205|ACVR1C|130399|activin A receptor, type IC##AF525680|ACVR1C|130399|activin A receptor, type IC##AF525681|ACVR1C|130399|activin A receptor, type IC##AY127050|ACVR1C|130399|activin A receptor, type IC##BC022530|ACVR1C|130399|activin A receptor, type IC##NM_001111032|ACVR1C|130399|activin A receptor, type IC##NM_001111033|ACVR1C|130399|activin A receptor, type IC##NM_145259|ACVR1C|130399|activin A receptor, type IC	0.0	
chr2	25647408	25647556	reg1037717.p1	4.104	+	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	-82020	-	TSC_hg19_v1_chr2_-_25565353 AB208833	-82119	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	-82154	-	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	248919	-	AB385496 TSC_hg19_v1_chr2_-_26101159	453647	-	TSC_hg19_v1_chr2_-_26101174 AB084279	453691	-	BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)	0.0	
chr4	109031259	109031439	reg1033486.p1	4.104	+	TSC_hg19_v1_chr4_+_108911045 BC000306 AM392952 AM393255 DQ891419 DQ894593 AB528829 AF001902	-120276	+	AK314444 TSC_hg19_v1_chr4_+_108911011	-120337	+	AF001903 NM_001184705 NM_005327 TSC_hg19_v1_chr4_+_108910984 X96752	-120413	+	AK303272 NM_001166119	56565	-	TSC_hg19_v1_chr4_+_109088684 BC020624	57335	+	TSC_hg19_v1_chr4_-_109090113 AF288571 AK225772 NM_001130713 NM_001130714 NM_016269	58450	-	BC000306|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ891419|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ894593|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001902|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK314444|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001903|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_001184705|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_005327|HADH|3033|hydroxyacyl-CoA dehydrogenase##X96752|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK303272|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1##BC020624|LOC641518|641518|uncharacterized LOC641518##AF288571|LEF1|51176|lymphoid enhancer-binding factor 1##AK225772|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1##NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1	0.076439	
chr4	14858128	14858308	reg1036405.p2	4.104	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-1228901	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-1308804	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-1312143	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	145491	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	145777	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	146079	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.0	
chr4	186347407	186347513	reg1034744.p2	4.104	+	TSC_hg19_v1_chr4_-_186347130 AK002062 AK091635 NM_018359	-371	-	AK303243 TSC_hg19_v1_chr4_+_186317996	-29480	+	TSC_hg19_v1_chr4_+_186317892 BC088376	-29565	+	BC127739 BC141968 BC150574 NM_001114357	3083	+	BC038515 AK302815 AL833337 TSC_hg19_v1_chr4_-_186392907 AB080722 BC028419 BX641119 AK097605 NM_001145411 NM_152775	45424	-	AK129863 BT007341 AB528880 CU674500 TSC_hg19_v1_chr4_-_186456662 AK222966 AF002280 AF002282 BC027870 AF039018 BC001017 AK313253 NM_001114107 NM_014476	109185	-	AK002062|UFSP2|55325|UFM1-specific peptidase 2##AK091635|UFSP2|55325|UFM1-specific peptidase 2##NM_018359|UFSP2|55325|UFM1-specific peptidase 2##AK303243|ANKRD37|353322|ankyrin repeat domain 37##BC088376|ANKRD37|353322|ankyrin repeat domain 37##BC127739|C4orf47|441054|chromosome 4 open reading frame 47##BC141968|C4orf47|441054|chromosome 4 open reading frame 47##BC150574|C4orf47|441054|chromosome 4 open reading frame 47##NM_001114357|C4orf47|441054|chromosome 4 open reading frame 47##BC038515|CCDC110|256309|coiled-coil domain containing 110##AK302815|CCDC110|256309|coiled-coil domain containing 110##AL833337|CCDC110|256309|coiled-coil domain containing 110##AB080722|CCDC110|256309|coiled-coil domain containing 110##BC028419|CCDC110|256309|coiled-coil domain containing 110##BX641119|CCDC110|256309|coiled-coil domain containing 110##AK097605|CCDC110|256309|coiled-coil domain containing 110##NM_001145411|CCDC110|256309|coiled-coil domain containing 110##NM_152775|CCDC110|256309|coiled-coil domain containing 110##AK129863|PDLIM3|27295|PDZ and LIM domain 3##BT007341|PDLIM3|27295|PDZ and LIM domain 3##AK222966|PDLIM3|27295|PDZ and LIM domain 3##AF002280|PDLIM3|27295|PDZ and LIM domain 3##AF002282|PDLIM3|27295|PDZ and LIM domain 3##BC027870|PDLIM3|27295|PDZ and LIM domain 3##AF039018|PDLIM3|27295|PDZ and LIM domain 3##BC001017|PDLIM3|27295|PDZ and LIM domain 3##AK313253|PDLIM3|27295|PDZ and LIM domain 3##NM_001114107|PDLIM3|27295|PDZ and LIM domain 3##NM_014476|PDLIM3|27295|PDZ and LIM domain 3	0.0	
chr6	93727114	93727240	reg1035146.p1	4.104	+	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-2430339	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-2430494	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-2720565	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	402006	-	TSC_hg19_v1_chr6_-_96025325 BC047582	2298112	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	2298224	+	BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha	0.017078	
chr10	43693520	43693650	reg1034689.p1	4.103	+	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	-59643	+	TSC_hg19_v1_chr10_+_43572516 NM_020630 NM_020975 BC003072 BC004257 X15262 AK291807 AB384817 CU678360 CU678648 Y12528	-120982	+	TSC_hg19_v1_chr10_+_43278248 AK308420 BC043345	-415335	+	BC022548 NM_145313	68781	-	BC054876 AY358584 NM_001184963 NM_173160	173505	+	TSC_hg19_v1_chr10_-_43892200 NM_001098208	198634	-	AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_020630|RET|5979|ret proto-oncogene##NM_020975|RET|5979|ret proto-oncogene##BC003072|RET|5979|ret proto-oncogene##BC004257|RET|5979|ret proto-oncogene##X15262|RET|5979|ret proto-oncogene##AK291807|RET|5979|ret proto-oncogene##Y12528|RET|5979|ret proto-oncogene##AK308420|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC043345|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC022548|RASGEF1A|221002|RasGEF domain family, member 1A##NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A##BC054876|FXYD4|53828|FXYD domain containing ion transport regulator 4##AY358584|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001184963|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_173160|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F	0.015534	
chr10	44796408	44796583	reg1032011.p1	4.103	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-652189	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-652290	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-694598	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	84004	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	610223	+	AK056518 TSC_hg19_v1_chr10_-_45455156	658652	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.0	
chr16	12605640	12605808	reg1030630.p2	4.103	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-535151	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-546640	+	NM_001130007	-595206	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	291927	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	291995	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	389744	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr16	66696853	66696961	reg1027332.p1	4.103	+	TSC_hg19_v1_chr16_+_66638658 BC023509 BC023591	-58227	+	TSC_hg19_v1_chr16_+_66638636 AY166714	-58266	+	TSC_hg19_v1_chr16_+_66638606 BC047701 NM_181553 BC036042 BC040227	-58333	+	TSC_hg19_v1_chr16_-_66730647 BC093679 AF479814 AF521889 AF521890 NM_178818 NM_181521	33725	-	TSC_hg19_v1_chr16_-_66785505 AK304233 AF035812 BC025959 AK291766 AK303031 BX648863	88585	-	BC010928 TSC_hg19_v1_chr16_-_66785513 AK295049 NM_006141	88655	-	BC023509|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC023591|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC047701|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##NM_181553|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC036042|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC040227|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC093679|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF479814|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521889|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521890|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_178818|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_181521|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AK304233|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AF035812|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC025959|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK291766|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK303031|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BX648863|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC010928|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK295049|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##NM_006141|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2	0.064479	
chr19	46992786	46992932	reg1037821.p1	4.103	+	TSC_hg19_v1_chr19_-_46974789 BC032508 NM_001103149 NM_018215	-18054	-	AL834344 TSC_hg19_v1_chr19_-_46974751 AK290218 BC051688	-18137	-	AK297668 AL136609 JN703457 NM_032040	-75988	-	TSC_hg19_v1_chr19_-_46999149 AK124720 NM_020709	6302	-	TSC_hg19_v1_chr19_+_47104390 BC006182	111538	+	AK094504 NM_001205281	111597	-	BC032508|PNMAL1|55228|PNMA-like 1##NM_001103149|PNMAL1|55228|PNMA-like 1##NM_018215|PNMAL1|55228|PNMA-like 1##AL834344|PNMAL1|55228|PNMA-like 1##AK290218|PNMAL1|55228|PNMA-like 1##BC051688|PNMAL1|55228|PNMA-like 1##AK297668|CCDC8|83987|coiled-coil domain containing 8##AL136609|CCDC8|83987|coiled-coil domain containing 8##JN703457|CCDC8|83987|coiled-coil domain containing 8##NM_032040|CCDC8|83987|coiled-coil domain containing 8##AK124720|PNMAL2|57469|PNMA-like 2##NM_020709|PNMAL2|57469|PNMA-like 2##BC006182|CALM3|808|calmodulin 3 (phosphorylase kinase, delta)##AK094504|LOC100506012|100506012|serine/threonine-protein phosphatase 5-like##NM_001205281|LOC100506012|100506012|serine/threonine-protein phosphatase 5-like	0.760891	CTCF.p2:9:0.761
chr2	111976910	111977044	reg1028286.p1	4.103	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-98490	+	AK300513 NM_001142807 BC022268	-486798	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-541155	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	664649	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	664784	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	679208	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.0	
chr2	46087775	46087937	reg1030483.p2	4.103	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-208782	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-249449	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-292728	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	436735	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	437119	+	NM_001145051	618847	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.0	
chr4	164253837	164253995	reg1007637.p1	4.103	+	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	-165838	-	TSC_hg19_v1_chr4_-_164088043 AK308601	-165879	-	TSC_hg19_v1_chr4_-_164088002 AK097352	-165924	-	NM_000909	30	-	BC042416 NM_006174	11174	+	AB527371 AM393077 BC143053 BC143054 BC146698 CR533560 CU688544 BC142943 AL136779 AK057325 BC125101 AK314517 BC028707 NM_032136	141049	-	BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_000909|NPY1R|4886|neuropeptide Y receptor Y1##BC042416|NPY5R|4889|neuropeptide Y receptor Y5##NM_006174|NPY5R|4889|neuropeptide Y receptor Y5##AM393077|TKTL2|84076|transketolase-like 2##BC143053|TKTL2|84076|transketolase-like 2##BC143054|TKTL2|84076|transketolase-like 2##BC146698|TKTL2|84076|transketolase-like 2##CR533560|TKTL2|84076|transketolase-like 2##BC142943|TKTL2|84076|transketolase-like 2##AL136779|TKTL2|84076|transketolase-like 2##AK057325|TKTL2|84076|transketolase-like 2##BC125101|TKTL2|84076|transketolase-like 2##AK314517|TKTL2|84076|transketolase-like 2##BC028707|TKTL2|84076|transketolase-like 2##NM_032136|TKTL2|84076|transketolase-like 2	0.0	
chr5	157002190	157002304	reg1032118.p1	4.103	+	TSC_hg19_v1_chr5_+_156887210 AK026158 AK308830 AK309242	-114977	+	AK296972 NM_001099287 NM_001172292	-115221	+	TSC_hg19_v1_chr5_+_156820161 AK172724	-182059	+	AB462931 TSC_hg19_v1_chr5_-_157002728	469	-	AF311317 AF326918 TSC_hg19_v1_chr5_-_157002784 Y13786 AK091464 AK308182 AX747000 NM_033274	558	-	AB527685 TSC_hg19_v1_chr5_-_157079170	76881	-	AK026158|NIPAL4|348938|NIPA-like domain containing 4##AK308830|NIPAL4|348938|NIPA-like domain containing 4##AK309242|NIPAL4|348938|NIPA-like domain containing 4##AK296972|NIPAL4|348938|NIPA-like domain containing 4##NM_001099287|NIPAL4|348938|NIPA-like domain containing 4##NM_001172292|NIPAL4|348938|NIPA-like domain containing 4##AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF311317|ADAM19|8728|ADAM metallopeptidase domain 19##AF326918|ADAM19|8728|ADAM metallopeptidase domain 19##Y13786|ADAM19|8728|ADAM metallopeptidase domain 19##AK091464|ADAM19|8728|ADAM metallopeptidase domain 19##AK308182|ADAM19|8728|ADAM metallopeptidase domain 19##NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19	0.0	
chr7	145700135	145700209	reg1042043.p2	4.103	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-1167036	-	TSC_hg19_v1_chr7_-_144533086 AK091736	-1167083	-	NM_001080413 AB528776	-1592853	-	NM_014141	113280	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	113712	+	TSC_hg19_v1_chr7_+_148036552 CR933671	2336393	+	AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##AK091736|TPK1|27010|thiamin pyrophosphokinase 1##NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##CR933671|CNTNAP2|26047|contactin associated protein-like 2	0.0	
chr8	66132308	66132397	reg1038614.p1	4.103	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	-421073	-	TSC_hg19_v1_chr8_+_65493611 AK091333	-638688	+	NM_152414 AK293979	-639494	+	TSC_hg19_v1_chr8_-_66546394 AK001373	414043	-	TSC_hg19_v1_chr8_-_66546404 AK304463	414054	-	TSC_hg19_v1_chr8_-_66546413 BC011607 BC018846 NM_018120	414080	-	BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK001373|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1##BC011607|ARMC1|55156|armadillo repeat containing 1##BC018846|ARMC1|55156|armadillo repeat containing 1##NM_018120|ARMC1|55156|armadillo repeat containing 1	0.0	
chr9	102025330	102025420	reg1031866.p1	4.103	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-40788	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-41132	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-41158	-	TSC_hg19_v1_chr9_-_102582187 AK057451	556790	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	558782	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	643552	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.0	
chr9	37531670	37531770	reg1031862.p1	4.103	+	TSC_hg19_v1_chr9_+_37485944 BC014331 AK023452 AK302345 AK303167 NM_022490 AK301347 AK024032 AK225050 BC017766 BC001337 CR457313 AK091294 AX746899	-45690	+	TSC_hg19_v1_chr9_-_37465448 AK292404	-66279	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	-66325	-	AF174598 AF176705 NM_012166 TSC_hg19_v1_chr9_-_37576280	44545	-	CR627326 AB435233 TSC_hg19_v1_chr9_-_37592574 BC034247	60799	-	TSC_hg19_v1_chr9_-_37592575 BC029423 NM_001001790 NM_001134484 NM_001134485	60885	-	BC014331|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK023452|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK302345|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK303167|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##NM_022490|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK301347|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK024032|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK225050|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC017766|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC001337|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##CR457313|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK091294|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5##AF174598|FBXO10|26267|F-box protein 10##AF176705|FBXO10|26267|F-box protein 10##NM_012166|FBXO10|26267|F-box protein 10##AB435233|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC034247|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC029423|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001001790|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134484|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134485|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)	0.014225	
chr1	181394395	181394525	reg1001397.p2	4.102	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-336595	+	NM_016545	-336823	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-391310	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	58240	+	BC137223 BC137224 AK128654 NM_001009992	636337	-	TSC_hg19_v1_chr1_-_182354649 AK301600	960222	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.0	
chr12	74931290	74931468	reg1012846.p2	4.102	+	TSC_hg19_v1_chr12_-_72667288 BC040230	-2264109	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	-2264875	+	AK095156 TSC_hg19_v1_chr12_-_72666355	-2265036	-	NM_001136262 TSC_hg19_v1_chr12_+_74931614 AK056642	206	+	TSC_hg19_v1_chr12_+_74931622 BC009111 AL713650	260	+	AK054742 TSC_hg19_v1_chr12_+_74933681	2241	+	BC040230|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AK095156|LOC283392|283392|uncharacterized LOC283392##NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B##AK056642|ATXN7L3B|552889|ataxin 7-like 3B##BC009111|ATXN7L3B|552889|ataxin 7-like 3B##AL713650|ATXN7L3B|552889|ataxin 7-like 3B	0.0	
chr14	93143716	93143897	reg1028563.p2	4.102	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	-24983	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	-25170	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-163847	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	71153	-	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	116880	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	245638	+	AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)	0.0	
chr15	41047631	41047732	reg1035226.p2	4.102	+	TSC_hg19_v1_chr15_-_41047453 AK001441 NM_018145 AK123192	-217	-	BC063844 TSC_hg19_v1_chr15_-_41047430 AK097286 AK092058	-248	-	TSC_hg19_v1_chr15_+_40987387 D14134 D13804	-60265	+	TSC_hg19_v1_chr15_+_41056274 AK223430 AK311872 NM_005258 BC112262 BC112264 BC143904 HQ258032	8627	+	NM_001130448 BC027487 AK291344	14536	+	TSC_hg19_v1_chr15_+_41099254 NM_001077268 AK122779 BC015738 AF445414	51661	+	AK001441|FAM82A2|55177|family with sequence similarity 82, member A2##NM_018145|FAM82A2|55177|family with sequence similarity 82, member A2##AK123192|FAM82A2|55177|family with sequence similarity 82, member A2##BC063844|FAM82A2|55177|family with sequence similarity 82, member A2##AK097286|FAM82A2|55177|family with sequence similarity 82, member A2##AK092058|FAM82A2|55177|family with sequence similarity 82, member A2##D14134|RAD51|5888|RAD51 homolog (S. cerevisiae)##D13804|RAD51|5888|RAD51 homolog (S. cerevisiae)##AK223430|GCHFR|2644|GTP cyclohydrolase I feedback regulator##AK311872|GCHFR|2644|GTP cyclohydrolase I feedback regulator##NM_005258|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112262|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112264|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC143904|GCHFR|2644|GTP cyclohydrolase I feedback regulator##HQ258032|GCHFR|2644|GTP cyclohydrolase I feedback regulator##NM_001130448|C15orf62|643338|chromosome 15 open reading frame 62##BC027487|C15orf62|643338|chromosome 15 open reading frame 62##AK291344|C15orf62|643338|chromosome 15 open reading frame 62##NM_001077268|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AK122779|ZFYVE19|84936|zinc finger, FYVE domain containing 19##BC015738|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AF445414|ZFYVE19|84936|zinc finger, FYVE domain containing 19	0.0	
chr20	4214307	4214411	reg1033621.p1	4.102	+	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	-84836	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	-84924	+	AL096778 NM_007219 BC039584 TSC_hg19_v1_chr20_-_3996221 BC000213 BC003141 NM_001134337 NM_001134338 BC032738	-218194	-	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	15231	-	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	452617	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	488175	+	AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##AL096778|RNF24|11237|ring finger protein 24##NM_007219|RNF24|11237|ring finger protein 24##BC039584|RNF24|11237|ring finger protein 24##BC000213|RNF24|11237|ring finger protein 24##NM_001134337|RNF24|11237|ring finger protein 24##NM_001134338|RNF24|11237|ring finger protein 24##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)	0.998214	CTCF.p2:8:0.998
chr5	95717338	95717478	reg1035634.p2	4.102	+	TSC_hg19_v1_chr5_-_95297609 BC028412 NM_012081	-419723	-	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	-419910	-	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	-558888	-	AK308575 NM_001177876	31280	-	AK303888 NM_001177875	50454	-	AB208874 AB590528 BC130295 BC136486 TSC_hg19_v1_chr5_-_95768927 X64810 M90753 BC031211 NM_000439	51414	-	BC028412|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_012081|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2##NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AK303888|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177875|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AB208874|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC130295|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC136486|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##X64810|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##M90753|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC031211|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_000439|PCSK1|5122|proprotein convertase subtilisin/kexin type 1	0.0	
chr6	428271	428338	reg1042019.p1	4.102	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-36540	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-135807	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-136219	+	AF508547 BC101697 BC101699 NM_148959	228649	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	264786	-	BC053850 NM_033260	884370	+	NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1	0.0	
chr7	24818622	24818802	reg1036094.p1	4.102	+	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-21115	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-21373	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	-21645	-	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	201032	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	346165	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	346228	-	NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic	0.0	
chr7	5710031	5710129	reg1030382.p2	4.102	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	-77570	+	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	-77642	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-139871	-	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	111142	-	BC004947 TSC_hg19_v1_chr7_-_5821284 AK297231 BC063825 AK092767 AX747717 AK297416 BX537406 NM_207111 NM_207116 AK292396	111229	-	TSC_hg19_v1_chr7_+_5862791 AK291169 AK096288	152705	+	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216##BC004947|RNF216|54476|ring finger protein 216##AK297231|RNF216|54476|ring finger protein 216##BC063825|RNF216|54476|ring finger protein 216##AK092767|RNF216|54476|ring finger protein 216##AK297416|RNF216|54476|ring finger protein 216##BX537406|RNF216|54476|ring finger protein 216##NM_207111|RNF216|54476|ring finger protein 216##NM_207116|RNF216|54476|ring finger protein 216##AK292396|RNF216|54476|ring finger protein 216##AK291169|ZNF815|401303|zinc finger protein 815##AK096288|ZNF815|401303|zinc finger protein 815	0.0	
chr9	19926323	19926403	reg1002268.p2	4.102	+	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-139412	-	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-517360	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-546136	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	696085	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	696133	-	AK056522 AY139834 NM_017794	731944	+	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797	0.0	
chr9	4762906	4763087	reg1007316.p2	4.102	+	AF183419 NM_001199853	-20954	-	NM_001199855	-21198	-	TSC_hg19_v1_chr9_-_4741309 NM_001199852 NM_016282	-21643	-	NM_005772 TSC_hg19_v1_chr9_+_4792833	29837	+	TSC_hg19_v1_chr9_+_4792936 AK022904 BC001025 AK225872	29927	+	TSC_hg19_v1_chr9_+_4792995 AJ276894 EU831474 EU831561 AF067172	30047	+	AF183419|AK3|50808|adenylate kinase 3##NM_001199853|AK3|50808|adenylate kinase 3##NM_001199855|AK3|50808|adenylate kinase 3##NM_001199852|AK3|50808|adenylate kinase 3##NM_016282|AK3|50808|adenylate kinase 3##NM_005772|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK022904|RCL1|10171|RNA terminal phosphate cyclase-like 1##BC001025|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK225872|RCL1|10171|RNA terminal phosphate cyclase-like 1##AJ276894|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831474|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831561|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF067172|RCL1|10171|RNA terminal phosphate cyclase-like 1	0.0	
chr1	11380451	11380561	reg1016768.p2	4.101	+	TSC_hg19_v1_chr1_+_11333566 BC004468 BT006832	-46961	+	TSC_hg19_v1_chr1_+_11333254 AK222808 NM_013319 AK074890 AF117064	-47190	+	TSC_hg19_v1_chr1_-_11322609 NM_004958	-57899	-	TSC_hg19_v1_chr1_+_11539211 AB593117 AK311332 AB037758 NM_020780	158729	+	AB463629 CR542110 CU692940 DQ892848 DQ892849 DQ896095 TSC_hg19_v1_chr1_-_11714417	333900	-	AK055344 NM_183412	333925	+	BC004468|UBIAD1|29914|UbiA prenyltransferase domain containing 1##BT006832|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK222808|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_013319|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AK074890|UBIAD1|29914|UbiA prenyltransferase domain containing 1##AF117064|UBIAD1|29914|UbiA prenyltransferase domain containing 1##NM_004958|MTOR|2475|mechanistic target of rapamycin (serine/threonine kinase)##AB593117|PTCHD2|57540|patched domain containing 2##AB037758|PTCHD2|57540|patched domain containing 2##NM_020780|PTCHD2|57540|patched domain containing 2##CR542110|FBXO2|26232|F-box protein 2##DQ892848|FBXO2|26232|F-box protein 2##DQ892849|FBXO2|26232|F-box protein 2##DQ896095|FBXO2|26232|F-box protein 2##AK055344|FBXO44|93611|F-box protein 44##NM_183412|FBXO44|93611|F-box protein 44	0.992295	
chr11	842696	842868	reg1026265.p1	4.101	+	CR536565 BC018649 AB464658 AJ420546 U37690 TSC_hg19_v1_chr11_-_842530 AK311997 BC005903 NM_021128	-262	-	TSC_hg19_v1_chr11_+_833007 AK223186 D29963 BC001374	-9773	+	TSC_hg19_v1_chr11_+_832985 AK293073 BC013302 U14650 AL161965	-9797	+	TSC_hg19_v1_chr11_+_842851 NM_001025238 NM_001025239 NM_003271 AK291089 BC000389 AK126456 NM_001025235 NM_001025236	125	+	TSC_hg19_v1_chr11_+_844103 NM_001025234	1301	+	TSC_hg19_v1_chr11_+_844125 BC093031	1352	+	CR536565|POLR2L|5441|polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa##BC018649|POLR2L|5441|polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa##U37690|POLR2L|5441|polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa##AK311997|POLR2L|5441|polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa##BC005903|POLR2L|5441|polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa##NM_021128|POLR2L|5441|polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa##AK223186|CD151|977|CD151 molecule (Raph blood group)##D29963|CD151|977|CD151 molecule (Raph blood group)##BC001374|CD151|977|CD151 molecule (Raph blood group)##AK293073|CD151|977|CD151 molecule (Raph blood group)##BC013302|CD151|977|CD151 molecule (Raph blood group)##U14650|CD151|977|CD151 molecule (Raph blood group)##AL161965|CD151|977|CD151 molecule (Raph blood group)##NM_001025238|TSPAN4|7106|tetraspanin 4##NM_001025239|TSPAN4|7106|tetraspanin 4##NM_003271|TSPAN4|7106|tetraspanin 4##AK291089|TSPAN4|7106|tetraspanin 4##BC000389|TSPAN4|7106|tetraspanin 4##AK126456|TSPAN4|7106|tetraspanin 4##NM_001025235|TSPAN4|7106|tetraspanin 4##NM_001025236|TSPAN4|7106|tetraspanin 4##NM_001025234|TSPAN4|7106|tetraspanin 4##BC093031|TSPAN4|7106|tetraspanin 4	0.0	
chr13	33762764	33762890	reg1025698.p2	4.101	+	AY082590 BC046563 NM_001243466 NM_178007	-2612	-	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-172304	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-602144	+	AL049801 AY082591 AK091804 NM_001243474 NM_052851	17337	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	97040	-	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	161941	-	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr13	98283596	98283700	reg1032915.p1	4.101	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	-196946	+	TSC_hg19_v1_chr13_+_98086350 AK315139 NM_021033 BC041333	-197211	+	TSC_hg19_v1_chr13_+_97999294 AF339832	-284354	+	NM_002271 BC045640	322289	+	TSC_hg19_v1_chr13_+_98628928 BX648222 AK303494 AK225286 BC001497 BC019309 DQ893033 EU176755 U72761	345184	+	TSC_hg19_v1_chr13_+_98795412 NM_001001715 NM_005766	511773	+	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family##AK315139|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_021033|RAP2A|5911|RAP2A, member of RAS oncogene family##BC041333|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_002271|IPO5|3843|importin 5##BC045640|IPO5|3843|importin 5##BX648222|IPO5|3843|importin 5##AK303494|IPO5|3843|importin 5##AK225286|IPO5|3843|importin 5##BC001497|IPO5|3843|importin 5##BC019309|IPO5|3843|importin 5##DQ893033|IPO5|3843|importin 5##EU176755|IPO5|3843|importin 5##U72761|IPO5|3843|importin 5##NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	0.022954	
chr15	85712210	85712317	reg1031429.p1	4.101	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-45945	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-186937	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-187026	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	211628	+	AF127481 NM_144767	508004	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	625834	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	0.630953	CTCF.p2:14:0.631
chr16	30583070	30583136	reg1033402.p1	4.101	+	EU446577 TSC_hg19_v1_chr16_-_30583034 BC018997	-81	-	EU446557 BC008821 AK093992 AX748400 NM_001172679 NM_033410 TSC_hg19_v1_chr16_-_30569709	-13495	-	TSC_hg19_v1_chr16_-_30546234 AB209546 AK299308 AK054567 BC001361 NM_023931 AK316254	-36913	-	NM_001024683 NM_145271	624	-	TSC_hg19_v1_chr16_-_30597103 AK309511 EU446576 AK292465 BC040642 AK298848 AK056692 NM_152458	13872	-	AK310459 AB065282 BC014000 NM_138447 TSC_hg19_v1_chr16_-_30621684	38553	-	EU446577|ZNF688|146542|zinc finger protein 688##BC018997|ZNF688|146542|zinc finger protein 688##EU446557|ZNF764|92595|zinc finger protein 764##BC008821|ZNF764|92595|zinc finger protein 764##AK093992|ZNF764|92595|zinc finger protein 764##NM_001172679|ZNF764|92595|zinc finger protein 764##NM_033410|ZNF764|92595|zinc finger protein 764##AB209546|ZNF747|65988|zinc finger protein 747##AK054567|ZNF747|65988|zinc finger protein 747##BC001361|ZNF747|65988|zinc finger protein 747##NM_023931|ZNF747|65988|zinc finger protein 747##NM_001024683|ZNF688|146542|zinc finger protein 688##NM_145271|ZNF688|146542|zinc finger protein 688##AK309511|ZNF785|146540|zinc finger protein 785##EU446576|ZNF785|146540|zinc finger protein 785##AK292465|ZNF785|146540|zinc finger protein 785##BC040642|ZNF785|146540|zinc finger protein 785##AK298848|ZNF785|146540|zinc finger protein 785##AK056692|ZNF785|146540|zinc finger protein 785##NM_152458|ZNF785|146540|zinc finger protein 785##AK310459|ZNF689|115509|zinc finger protein 689##AB065282|ZNF689|115509|zinc finger protein 689##BC014000|ZNF689|115509|zinc finger protein 689##NM_138447|ZNF689|115509|zinc finger protein 689	0.0	
chr17	80065518	80065634	reg1032917.p1	4.101	+	TSC_hg19_v1_chr17_-_80056105 BC063242 NM_004104	-9472	-	TSC_hg19_v1_chr17_-_80056081 AB209988 U29344	-9509	-	TSC_hg19_v1_chr17_-_80054282 AY451392 U26644 AB384663	-11304	-	TSC_hg19_v1_chr17_-_80170705 BC040264 BC110997 NM_198082	105159	-	NM_001042422 NM_001206950 TSC_hg19_v1_chr17_+_80186285	120773	+	NM_004207 TSC_hg19_v1_chr17_+_80186920 AK127090 AK223040 U81800	121340	+	BC063242|FASN|2194|fatty acid synthase##NM_004104|FASN|2194|fatty acid synthase##AB209988|FASN|2194|fatty acid synthase##U29344|FASN|2194|fatty acid synthase##AY451392|FASN|2194|fatty acid synthase##U26644|FASN|2194|fatty acid synthase##BC040264|CCDC57|284001|coiled-coil domain containing 57##BC110997|CCDC57|284001|coiled-coil domain containing 57##NM_198082|CCDC57|284001|coiled-coil domain containing 57##NM_001042422|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_001206950|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_004207|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##AK223040|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##U81800|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)	0.160939	
chr20	52367680	52367861	reg1028586.p1	4.101	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-156971	-	AF041259 NM_006526	-168135	-	AK302570 NM_001193421	-565949	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	319292	-	AK315220 NM_003657	319533	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	422750	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr22	39780944	39781073	reg1034822.p1	4.101	+	AJ002303 NM_145738	-20834	+	TSC_hg19_v1_chr22_+_39745981 NM_004711 NM_145731 BC000731 AK295863 CR456590 AK289507 AB209372 CU013190 CU013478 AB587338 AJ002304 AJ002305 BT007135 CU674372	-35103	+	BC014017 BC013674 BC013861 BC015032 BC015767 BC088373 BC063662 BC071666 CR456566 BC006483 BC012146 BC012786 TSC_hg19_v1_chr22_-_39715629 AK092695 AK297711 AK315693 AX747675 BC008492 BC107711 D28415 NM_000967 NM_001033853	-65369	-	BC050554 NM_006116 NM_153497 TSC_hg19_v1_chr22_+_39795796 AK296314 BC038582 AF425640 AK312456 U49928	14762	+	TSC_hg19_v1_chr22_+_39795812 AK291668 AK316004 AK308903 AB591024 CU690722	14803	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	72312	+	AJ002303|SYNGR1|9145|synaptogyrin 1##NM_145738|SYNGR1|9145|synaptogyrin 1##NM_004711|SYNGR1|9145|synaptogyrin 1##NM_145731|SYNGR1|9145|synaptogyrin 1##BC000731|SYNGR1|9145|synaptogyrin 1##AK295863|SYNGR1|9145|synaptogyrin 1##CR456590|SYNGR1|9145|synaptogyrin 1##AK289507|SYNGR1|9145|synaptogyrin 1##CU013190|SYNGR1|9145|synaptogyrin 1##CU013478|SYNGR1|9145|synaptogyrin 1##AJ002304|SYNGR1|9145|synaptogyrin 1##AJ002305|SYNGR1|9145|synaptogyrin 1##BT007135|SYNGR1|9145|synaptogyrin 1##BC014017|RPL3|6122|ribosomal protein L3##BC013674|RPL3|6122|ribosomal protein L3##BC013861|RPL3|6122|ribosomal protein L3##BC015032|RPL3|6122|ribosomal protein L3##BC015767|RPL3|6122|ribosomal protein L3##BC088373|RPL3|6122|ribosomal protein L3##BC063662|RPL3|6122|ribosomal protein L3##BC071666|RPL3|6122|ribosomal protein L3##CR456566|RPL3|6122|ribosomal protein L3##BC006483|RPL3|6122|ribosomal protein L3##BC012146|RPL3|6122|ribosomal protein L3##BC012786|RPL3|6122|ribosomal protein L3##AK092695|RPL3|6122|ribosomal protein L3##AK297711|RPL3|6122|ribosomal protein L3##AK315693|RPL3|6122|ribosomal protein L3##BC008492|RPL3|6122|ribosomal protein L3##BC107711|RPL3|6122|ribosomal protein L3##NM_000967|RPL3|6122|ribosomal protein L3##NM_001033853|RPL3|6122|ribosomal protein L3##BC050554|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_006116|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_153497|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK296314|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##BC038582|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AF425640|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK312456|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##U49928|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK291668|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK316004|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK308903|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase	0.082469	
chr3	105974829	105975003	reg1032605.p1	4.101	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-387109	-	CR749655 TSC_hg19_v1_chr3_-_105421064	-553862	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-889094	+	TSC_hg19_v1_chr3_-_106959482 BC036229	984563	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	984676	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	1121394	+	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54	0.0	
chr4	26732608	26732741	reg1034615.p1	4.101	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-146994	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-240689	-	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	-409992	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	129866	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3989325	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3989520	+	NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7	0.0	
chr4	32776828	32776916	reg1034445.p2	4.101	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-2054413	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-2054678	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-2054873	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	3469165	-	AK131492 NM_001136536 AK304357 AK316523	3506374	+	BC157885 NM_001170700	3508771	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.135451	
chr6	149790091	149790249	reg1033182.p2	4.101	+	AY340238 NM_001002255 BC130305 HQ258040	-68662	+	AK315038 NM_015093 AK307650	-150729	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	-151067	+	TSC_hg19_v1_chr6_-_149806031 AK127932	15897	-	TSC_hg19_v1_chr6_-_149806151 AB458221 AB458222 BC157832 NM_207360	15973	-	TSC_hg19_v1_chr6_-_149867153 CU676802 GQ129364 GQ129365 BC064134	76974	-	AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK127932|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AB458221|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AB458222|ZC3H12D|340152|zinc finger CCCH-type containing 12D##BC157832|ZC3H12D|340152|zinc finger CCCH-type containing 12D##NM_207360|ZC3H12D|340152|zinc finger CCCH-type containing 12D##GQ129364|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##GQ129365|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC064134|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4	0.0	
chr7	69139840	69139963	reg1033614.p1	4.101	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-75313	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-75572	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-76065	+	TSC_hg19_v1_chr7_+_70231164 AK296981	1091304	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1457887	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2661877	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.0	
chr10	116308334	116308515	reg1003834.p1	4.100	+	TSC_hg19_v1_chr10_-_116286673 CR749819 NM_006720 AK098277	-21745	-	TSC_hg19_v1_chr10_-_116286631 AK298709 BC002448	-21822	-	CU677968 TSC_hg19_v1_chr10_-_116251632	-56817	-	AK297344 TSC_hg19_v1_chr10_-_116392101	83676	-	AF005654 NM_002313	109632	-	AB462929 TSC_hg19_v1_chr10_-_116444183 D31883	135739	-	CR749819|ABLIM1|3983|actin binding LIM protein 1##NM_006720|ABLIM1|3983|actin binding LIM protein 1##AK098277|ABLIM1|3983|actin binding LIM protein 1##AK298709|ABLIM1|3983|actin binding LIM protein 1##BC002448|ABLIM1|3983|actin binding LIM protein 1##AK297344|ABLIM1|3983|actin binding LIM protein 1##AF005654|ABLIM1|3983|actin binding LIM protein 1##NM_002313|ABLIM1|3983|actin binding LIM protein 1##D31883|ABLIM1|3983|actin binding LIM protein 1	0.109455	
chr11	355288	355424	reg1037427.p1	4.100	+	TSC_hg19_v1_chr11_-_320925 X57352	-34369	-	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	-34512	-	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	-41345	+	TSC_hg19_v1_chr11_+_369724 NM_178537 AB089939 BC131528	14409	+	TSC_hg19_v1_chr11_+_394208 BC000081 NM_007183 AK025067 AK223511 Z98265	38856	+	AF053719 TSC_hg19_v1_chr11_+_394242 DQ891692 DQ894875 CU674026	38908	+	X57352|IFITM3|10410|interferon induced transmembrane protein 3##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3##J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_178537|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##AB089939|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC131528|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC000081|PKP3|11187|plakophilin 3##NM_007183|PKP3|11187|plakophilin 3##AK025067|PKP3|11187|plakophilin 3##AK223511|PKP3|11187|plakophilin 3##Z98265|PKP3|11187|plakophilin 3##AF053719|PKP3|11187|plakophilin 3##DQ891692|PKP3|11187|plakophilin 3##DQ894875|PKP3|11187|plakophilin 3	0.0	
chr12	1507930	1508033	reg1033153.p2	4.100	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-407529	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-449155	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-490899	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	195370	-	AY009399 NM_030775	218240	+	BC001749 NM_032642	230430	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.967061	CTCF.p2:0:0.967
chr14	22080564	22080744	reg1033785.p1	4.100	+	AB528817 NM_001005465	-41780	-	AK293574 AK001276 BC136528 BC136529 AK299931 X98834 AB002358 NM_005407	-75469	-	AK294051 BC024245 AK296414 BC090958 AK289358 TSC_hg19_v1_chr14_-_21994473	-86242	-	NM_001005466 AB529274 BC137371 BC137382	22392	-	AB463964 NM_001001912 AY726598	52668	+	X58763 TSC_hg19_v1_chr14_+_22989364	908695	+	NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##AK293574|SALL2|6297|sal-like 2 (Drosophila)##AK001276|SALL2|6297|sal-like 2 (Drosophila)##BC136528|SALL2|6297|sal-like 2 (Drosophila)##BC136529|SALL2|6297|sal-like 2 (Drosophila)##AK299931|SALL2|6297|sal-like 2 (Drosophila)##X98834|SALL2|6297|sal-like 2 (Drosophila)##AB002358|SALL2|6297|sal-like 2 (Drosophila)##NM_005407|SALL2|6297|sal-like 2 (Drosophila)##AK294051|SALL2|6297|sal-like 2 (Drosophila)##BC024245|SALL2|6297|sal-like 2 (Drosophila)##AK296414|SALL2|6297|sal-like 2 (Drosophila)##BC090958|SALL2|6297|sal-like 2 (Drosophila)##AK289358|SALL2|6297|sal-like 2 (Drosophila)##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2	0.550812	CTCF.p2:60:0.551
chr16	87844131	87844270	reg1034288.p2	4.100	+	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	-44630	-	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	-44685	-	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	-207490	+	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	58875	-	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	125947	-	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	140968	+	BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##BC001044|KLHDC4|54758|kelch domain containing 4##DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3##DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein	0.0	
chr17	79407935	79408022	reg1031054.p1	4.100	+	NM_001080519	-34439	+	AK096111 NM_178520	-103505	-	TSC_hg19_v1_chr17_-_79269100 NM_001037984 NM_138570	-138885	-	TSC_hg19_v1_chr17_-_79478238 BC009544 BC010417 BC018861 M16247	70432	-	BC023548 TSC_hg19_v1_chr17_-_79478994 BC039144	71000	-	BC001920 BC015779 BC053572 BC015005 BC009848 BC010999 BC007442 BC012050 BC018774 BC015695 BC000292 AK304637 TSC_hg19_v1_chr17_-_79479829 AK291937 AK301175 X04098	71827	-	NM_001080519|BAHCC1|57597|BAH domain and coiled-coil containing 1##AK096111|TMEM105|284186|transmembrane protein 105##NM_178520|TMEM105|284186|transmembrane protein 105##NM_001037984|SLC38A10|124565|solute carrier family 38, member 10##NM_138570|SLC38A10|124565|solute carrier family 38, member 10##BC009544|ACTG1|71|actin, gamma 1##BC010417|ACTG1|71|actin, gamma 1##BC018861|ACTG1|71|actin, gamma 1##M16247|ACTG1|71|actin, gamma 1##BC023548|ACTG1|71|actin, gamma 1##BC039144|ACTG1|71|actin, gamma 1##BC001920|ACTG1|71|actin, gamma 1##BC015779|ACTG1|71|actin, gamma 1##BC053572|ACTG1|71|actin, gamma 1##BC015005|ACTG1|71|actin, gamma 1##BC009848|ACTG1|71|actin, gamma 1##BC010999|ACTG1|71|actin, gamma 1##BC007442|ACTG1|71|actin, gamma 1##BC012050|ACTG1|71|actin, gamma 1##BC018774|ACTG1|71|actin, gamma 1##BC015695|ACTG1|71|actin, gamma 1##BC000292|ACTG1|71|actin, gamma 1##AK304637|ACTG1|71|actin, gamma 1##AK291937|ACTG1|71|actin, gamma 1##AK301175|ACTG1|71|actin, gamma 1##X04098|ACTG1|71|actin, gamma 1	0.063477	
chr18	56232375	56232541	reg1031733.p1	4.100	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-343608	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-343655	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-343696	+	BX647796 NM_052947	63730	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	106183	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	106270	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.0	
chr19	56183039	56183134	reg1031454.p2	4.100	+	TSC_hg19_v1_chr19_+_56166422 X64044 CU679069 AB527505 AB451261 AB451387	-16642	+	TSC_hg19_v1_chr19_+_56166394 BC008740	-16688	+	NM_001012478 NM_007279 TSC_hg19_v1_chr19_+_56165489 AK311672 BC030574	-17623	+	TSC_hg19_v1_chr19_+_56186560 NM_001130072 NM_013333	3411	+	TSC_hg19_v1_chr19_+_56186569 AK300545	3484	+	TSC_hg19_v1_chr19_+_56186593 AK022454 AK314690	3507	+	X64044|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##AB451261|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##AB451387|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##BC008740|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##NM_001012478|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##NM_007279|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##AK311672|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##BC030574|U2AF2|11338|U2 small nuclear RNA auxiliary factor 2##NM_001130072|EPN1|29924|epsin 1##NM_013333|EPN1|29924|epsin 1##AK300545|EPN1|29924|epsin 1##AK022454|EPN1|29924|epsin 1##AK314690|EPN1|29924|epsin 1	0.978643	CTCF.p2:0:0.837
chr1	99405761	99405871	reg1034809.p1	4.100	+	TSC_hg19_v1_chr1_+_99127278 NM_015976 NM_152238 AK025031 AK223229 AL049989 AF121857 AK298211 BC018105 BC010349	-278508	+	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	-1019210	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	-1019257	-	BC040174 AK295688 BC140086 BC143086 AY634620 BC136350 BC144000 AY574039 FJ472844 NM_001010861 NM_001037317	64496	-	AF541281 NM_001166252 NM_014839 AB007924 AK056665 AY304518 AB384482 BC042963 TSC_hg19_v1_chr1_+_99730047 AK291369 AK297417	324134	+	TSC_hg19_v1_chr1_+_99730067 AF357013 AK300361	324269	+	NM_015976|SNX7|51375|sorting nexin 7##NM_152238|SNX7|51375|sorting nexin 7##AK025031|SNX7|51375|sorting nexin 7##AK223229|SNX7|51375|sorting nexin 7##AL049989|SNX7|51375|sorting nexin 7##AF121857|SNX7|51375|sorting nexin 7##AK298211|SNX7|51375|sorting nexin 7##BC018105|SNX7|51375|sorting nexin 7##BC010349|SNX7|51375|sorting nexin 7##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##BC040174|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AK295688|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC140086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC143086|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY634620|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC136350|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##BC144000|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AY574039|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##FJ472844|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001010861|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##NM_001037317|LPPR5|163404|lipid phosphate phosphatase-related protein type 5##AF541281|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_001166252|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##NM_014839|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AB007924|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AY304518|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##BC042963|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK291369|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AF357013|LPPR4|9890|lipid phosphate phosphatase-related protein type 4##AK300361|LPPR4|9890|lipid phosphate phosphatase-related protein type 4	0.019029	
chr2	46688902	46689082	reg1004919.p2	4.100	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	-164017	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	-164401	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-809918	+	NM_001145051	17711	+	BC034808 NM_080653	58103	-	TSC_hg19_v1_chr2_+_46769874 NM_012249 AK095329	80857	+	U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375##BC034808|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_080653|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_012249|RHOQ|23433|ras homolog gene family, member Q##AK095329|RHOQ|23433|ras homolog gene family, member Q	0.0	
chr2	62520899	62521012	reg1030607.p2	4.100	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-97689	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-388126	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-405169	-	BC047439 AK091902 AX747245 NM_198276	212584	-	AK292545 NM_001142615	380030	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	412011	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr3	127494807	127494953	reg1029479.p2	4.100	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-103063	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-146848	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-177596	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	46550	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	47262	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	139438	+	NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.0	
chr4	87857642	87857813	reg1035863.p2	4.100	+	TSC_hg19_v1_chr4_+_87857481 L13743	-244	+	TSC_hg19_v1_chr4_+_87856199 AK296149 NM_001166693 AK300364 BC017432 AK302199	-1512	+	BC016746 BC063410 NM_144645	-44167	-	TSC_hg19_v1_chr4_+_87928422 L13773 BC114930 NM_005935 AK296243 L25050 AB385236	70594	+	TSC_hg19_v1_chr4_+_87968211 AF177238 AF177239	110524	+	BC041901 TSC_hg19_v1_chr4_-_88141661 BX640727 BX538173 NM_020803 CR749265 BX640744 BX647454 BC041384	283935	-	AK296149|AFF1|4299|AF4/FMR2 family, member 1##NM_001166693|AFF1|4299|AF4/FMR2 family, member 1##AK300364|AFF1|4299|AF4/FMR2 family, member 1##BC017432|AFF1|4299|AF4/FMR2 family, member 1##BC016746|C4orf36|132989|chromosome 4 open reading frame 36##BC063410|C4orf36|132989|chromosome 4 open reading frame 36##NM_144645|C4orf36|132989|chromosome 4 open reading frame 36##L13773|AFF1|4299|AF4/FMR2 family, member 1##BC114930|AFF1|4299|AF4/FMR2 family, member 1##NM_005935|AFF1|4299|AF4/FMR2 family, member 1##AK296243|AFF1|4299|AF4/FMR2 family, member 1##L25050|AFF1|4299|AF4/FMR2 family, member 1##AF177238|AFF1|4299|AF4/FMR2 family, member 1##AF177239|AFF1|4299|AF4/FMR2 family, member 1##BC041901|KLHL8|57563|kelch-like 8 (Drosophila)##BX640727|KLHL8|57563|kelch-like 8 (Drosophila)##BX538173|KLHL8|57563|kelch-like 8 (Drosophila)##NM_020803|KLHL8|57563|kelch-like 8 (Drosophila)##CR749265|KLHL8|57563|kelch-like 8 (Drosophila)##BX640744|KLHL8|57563|kelch-like 8 (Drosophila)##BX647454|KLHL8|57563|kelch-like 8 (Drosophila)##BC041384|KLHL8|57563|kelch-like 8 (Drosophila)	0.019459	
chr6	11382542	11382622	reg1032900.p2	4.100	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-42	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-149672	-	L43821 TSC_hg19_v1_chr6_-_11232900	-149682	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	155916	+	NM_001143948 NM_032744	396697	-	NM_002114	630141	+	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1	0.0	
chr8	2481062	2481243	reg1022246.p3	4.100	+	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-487950	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-528244	+	TSC_hg19_v1_chr8_+_1950340 BC169332	-530800	+	AK128880 TSC_hg19_v1_chr8_-_2585966	104830	-	AY017307 TSC_hg19_v1_chr8_-_4852228	2371073	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	2371142	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##BC169332|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.990822	CTCF.p2:7:0.991
chr11	65307959	65308069	reg1006992.p2	4.099	+	TSC_hg19_v1_chr11_+_65292576 AF297709 BC069233 AK314945 AK302198 AB047077 AB051427 AB051428	-15414	+	TSC_hg19_v1_chr11_+_65292533 NM_001048218 NM_020680	-15477	+	TSC_hg19_v1_chr11_+_65271764 AF001540	-36504	+	TSC_hg19_v1_chr11_-_65314049 AK090750	6095	-	TSC_hg19_v1_chr11_-_65325391 AF135960 BC136277	17435	-	TSC_hg19_v1_chr11_-_65325673 AK024477 NM_001130144 NM_001164266 NM_021070	17854	-	AF297709|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##BC069233|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK314945|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK302198|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB047077|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB051427|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB051428|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##NM_001048218|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##NM_020680|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK090750|LTBP3|4054|latent transforming growth factor beta binding protein 3##AF135960|LTBP3|4054|latent transforming growth factor beta binding protein 3##BC136277|LTBP3|4054|latent transforming growth factor beta binding protein 3##AK024477|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_001130144|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_001164266|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_021070|LTBP3|4054|latent transforming growth factor beta binding protein 3	0.754378	CTCF.p2:-71:0.754
chr14	24777170	24777303	reg1007947.p1	4.099	+	TSC_hg19_v1_chr14_-_24777184 BC035970	-50	-	AF544398 TSC_hg19_v1_chr14_-_24777163	-68	-	AK000387 TSC_hg19_v1_chr14_-_24777155	-82	-	NM_001164692 NM_019839 AK304169 BC038437 AB032558	2137	+	TSC_hg19_v1_chr14_-_24780610 NM_014430 BC000982 AF190901	3356	-	TSC_hg19_v1_chr14_-_24780632 BC050376	3395	-	BC035970|CIDEB|27141|cell death-inducing DFFA-like effector b##AF544398|CIDEB|27141|cell death-inducing DFFA-like effector b##AK000387|CIDEB|27141|cell death-inducing DFFA-like effector b##NM_001164692|LTB4R2|56413|leukotriene B4 receptor 2##NM_019839|LTB4R2|56413|leukotriene B4 receptor 2##AK304169|LTB4R2|56413|leukotriene B4 receptor 2##BC038437|LTB4R2|56413|leukotriene B4 receptor 2##AB032558|LTB4R2|56413|leukotriene B4 receptor 2##NM_014430|CIDEB|27141|cell death-inducing DFFA-like effector b##BC000982|CIDEB|27141|cell death-inducing DFFA-like effector b##AF190901|CIDEB|27141|cell death-inducing DFFA-like effector b	0.0	
chr15	69453990	69454170	reg1035685.p1	4.099	+	TSC_hg19_v1_chr15_+_69452935 BC142975 AY635582 NM_015554 AK098595 BC033828 BC019011	-1182	+	NM_001184779 NM_024505 AF353088 AF353089 AK314689 AK074071	-147029	+	NM_001184780 NM_145658 AY358983 AF325189 AF325190 BC017998 AF275321 BC125097 BC125098 CU676134	-231165	+	TSC_hg19_v1_chr15_+_69591278 BC039234 NM_017705	137208	+	AK000197 AY424283 NM_001104554	152661	+	TSC_hg19_v1_chr15_+_69706649 NM_004856 NM_138555 BC051826 AK308322	252565	+	AY635582|GLCE|26035|glucuronic acid epimerase##NM_015554|GLCE|26035|glucuronic acid epimerase##NM_001184779|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_024505|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353088|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF353089|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK314689|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AK074071|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_001184780|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##NM_145658|SPESP1|246777|sperm equatorial segment protein 1##AY358983|SPESP1|246777|sperm equatorial segment protein 1##AF325189|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##AF325190|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC017998|SPESP1|246777|sperm equatorial segment protein 1##AF275321|SPESP1|246777|sperm equatorial segment protein 1##BC125097|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC125098|NOX5|79400|NADPH oxidase, EF-hand calcium binding domain 5##BC039234|PAQR5|54852|progestin and adipoQ receptor family member V##NM_017705|PAQR5|54852|progestin and adipoQ receptor family member V##AK000197|PAQR5|54852|progestin and adipoQ receptor family member V##AY424283|PAQR5|54852|progestin and adipoQ receptor family member V##NM_001104554|PAQR5|54852|progestin and adipoQ receptor family member V##NM_004856|KIF23|9493|kinesin family member 23##NM_138555|KIF23|9493|kinesin family member 23##BC051826|KIF23|9493|kinesin family member 23##AK308322|KIF23|9493|kinesin family member 23	0.0	
chr16	8622830	8622950	reg1003511.p1	4.099	+	AF094849 AF109106 AF229057 NM_145891 NM_145892 NM_145893	-1240140	+	AK001027 NM_001142334	-1799081	+	TSC_hg19_v1_chr16_+_6533765 BC033885	-2089115	+	TSC_hg19_v1_chr16_+_8715563 NM_024109 AK315383 BC001908 AK022495	92650	+	TSC_hg19_v1_chr16_+_8768473 NM_020686 BX537362 AK096146 BC031413 BC015628	145572	+	NM_000663 TSC_hg19_v1_chr16_+_8806841 BC013965	183945	+	AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_024109|METTL22|79091|methyltransferase like 22##AK315383|METTL22|79091|methyltransferase like 22##BC001908|METTL22|79091|methyltransferase like 22##AK022495|METTL22|79091|methyltransferase like 22##NM_020686|ABAT|18|4-aminobutyrate aminotransferase##BX537362|ABAT|18|4-aminobutyrate aminotransferase##AK096146|ABAT|18|4-aminobutyrate aminotransferase##BC031413|ABAT|18|4-aminobutyrate aminotransferase##BC015628|ABAT|18|4-aminobutyrate aminotransferase##NM_000663|ABAT|18|4-aminobutyrate aminotransferase##BC013965|ABAT|18|4-aminobutyrate aminotransferase	0.0	
chr18	20817571	20817676	reg1010891.p1	4.099	+	BC037218 NM_138375	-81835	+	EF028204 NM_001100619	-101897	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-303808	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	200248	-	AK057292 NM_003831	215163	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	215623	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.0	
chr21	44582653	44582750	reg1029406.p1	4.099	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-55017	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-55076	-	L19501 BC007257 NM_001178008 NM_001178009	-86254	-	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	6473	+	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	263288	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	264294	-	NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##L19501|CBS|875|cystathionine-beta-synthase##BC007257|CBS|875|cystathionine-beta-synthase##NM_001178008|CBS|875|cystathionine-beta-synthase##NM_001178009|CBS|875|cystathionine-beta-synthase##NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1	0.0	
chr2	25496657	25496837	reg1030899.p2	4.099	+	TSC_hg19_v1_chr2_-_25475127 AF480163 NM_153759	-21541	-	TSC_hg19_v1_chr2_-_25468920 AK025230	-27769	-	TSC_hg19_v1_chr2_-_25467080 BC023612	-29612	-	TSC_hg19_v1_chr2_-_25536762 AB527956 EU446951	40060	-	AF067972 TSC_hg19_v1_chr2_-_25564801 BC043617 NM_022552	68052	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	68581	-	AF480163|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_153759|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##EU446951|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF067972|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC043617|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_022552|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.041366	
chr3	3243397	3243568	reg1028437.p1	4.099	+	TSC_hg19_v1_chr3_-_3221401 NM_001173482 NM_016302	-22081	-	TSC_hg19_v1_chr3_-_3221386 AK301423	-22096	-	TSC_hg19_v1_chr3_-_3221376 AF117230 CU675978 CU688352 AK058191 BC059171 CR627060 AK027507 AK312577 BC017419 BC067811	-22110	-	TSC_hg19_v1_chr3_+_3841114 NM_020873	597617	+	AK307537 NM_001243723 NM_006515 TSC_hg19_v1_chr3_+_4345015	1101526	+	TSC_hg19_v1_chr3_+_4345048 AK222734 AK297865 AK302296 AB590082 AF054989 BC011635 BC008931 U80776 AY952295 CU679994	1101581	+	NM_001173482|CRBN|51185|cereblon##NM_016302|CRBN|51185|cereblon##AK301423|CRBN|51185|cereblon##AF117230|CRBN|51185|cereblon##AK058191|CRBN|51185|cereblon##BC059171|CRBN|51185|cereblon##CR627060|CRBN|51185|cereblon##AK027507|CRBN|51185|cereblon##AK312577|CRBN|51185|cereblon##BC017419|CRBN|51185|cereblon##BC067811|CRBN|51185|cereblon##NM_020873|LRRN1|57633|leucine rich repeat neuronal 1##AK307537|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_001243723|SETMAR|6419|SET domain and mariner transposase fusion gene##NM_006515|SETMAR|6419|SET domain and mariner transposase fusion gene##AK222734|SETMAR|6419|SET domain and mariner transposase fusion gene##AK297865|SETMAR|6419|SET domain and mariner transposase fusion gene##AK302296|SETMAR|6419|SET domain and mariner transposase fusion gene##AF054989|SETMAR|6419|SET domain and mariner transposase fusion gene##BC011635|SETMAR|6419|SET domain and mariner transposase fusion gene##BC008931|SETMAR|6419|SET domain and mariner transposase fusion gene##U80776|SETMAR|6419|SET domain and mariner transposase fusion gene##AY952295|SETMAR|6419|SET domain and mariner transposase fusion gene	0.0	
chr11	94276996	94277080	reg1032610.p2	4.098	+	NM_001190462	-31344	+	TSC_hg19_v1_chr11_+_94227168 NM_017704 AF025354 AK000196 BC017798 AK000448 AL833977	-49880	+	U37359 TSC_hg19_v1_chr11_-_94227011 BC017823 BC005241 AK095388 AF022778 AK308318 NM_005590 NM_005591	-50065	-	AK293616 NM_002033 TSC_hg19_v1_chr11_+_94277086 M58597 BC136373 BC136374	41	+	TSC_hg19_v1_chr11_+_94277605 M58596	561	+	NM_152431 AB079366 AK093475 AX748151 BC031060 DQ891240 DQ894425 AB590313 CU689100	23540	+	NM_001190462|LOC643037|643037|uncharacterized LOC643037##NM_017704|ANKRD49|54851|ankyrin repeat domain 49##AF025354|ANKRD49|54851|ankyrin repeat domain 49##AK000196|ANKRD49|54851|ankyrin repeat domain 49##BC017798|ANKRD49|54851|ankyrin repeat domain 49##AK000448|ANKRD49|54851|ankyrin repeat domain 49##AL833977|ANKRD49|54851|ankyrin repeat domain 49##U37359|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC017823|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC005241|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK095388|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AF022778|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK308318|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005590|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005591|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK293616|PIWIL4|143689|piwi-like 4 (Drosophila)##NM_002033|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58597|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136373|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136374|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)##AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)##AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)##BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)	0.027611	
chr1	25899396	25899504	reg1030743.p2	4.098	+	TSC_hg19_v1_chr1_+_25870146 BC029770 AL117654 AB528624	-29286	+	TSC_hg19_v1_chr1_+_25870097 AK091219 NM_015627	-29359	+	TSC_hg19_v1_chr1_+_25757387 AK311472 NM_018202 AY845015 BC007687 AK001609 AY845035 AY845036 BC032427 BC020801	-141965	+	AF261655 NM_020379	44508	+	AB209275 TSC_hg19_v1_chr1_+_25944698	45205	+	TSC_hg19_v1_chr1_+_26126678 AJ306399 NM_020451 NM_206926	227218	+	BC029770|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AL117654|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AK091219|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##NM_015627|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AK311472|TMEM57|55219|transmembrane protein 57##NM_018202|TMEM57|55219|transmembrane protein 57##AY845015|TMEM57|55219|transmembrane protein 57##BC007687|TMEM57|55219|transmembrane protein 57##AK001609|TMEM57|55219|transmembrane protein 57##AY845035|TMEM57|55219|transmembrane protein 57##AY845036|TMEM57|55219|transmembrane protein 57##BC032427|TMEM57|55219|transmembrane protein 57##BC020801|TMEM57|55219|transmembrane protein 57##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AB209275|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AJ306399|SEPN1|57190|selenoprotein N, 1##NM_020451|SEPN1|57190|selenoprotein N, 1##NM_206926|SEPN1|57190|selenoprotein N, 1	0.0	
chr16	47495121	47495196	reg1031238.p2	4.098	+	TSC_hg19_v1_chr16_-_47495158 AF212247 AK301908	-1	-	TSC_hg19_v1_chr16_-_47494995 BC024162 NM_030790	-123	-	TSC_hg19_v1_chr16_-_47494975 BC006321 DQ893514 DQ896493 AF503339 AK027596	-293	-	TSC_hg19_v1_chr16_+_47495206 NM_000293 NM_001031835 AK298588	30	+	TSC_hg19_v1_chr16_+_47495241 X84908 CR936710 BC033657 AK309226	81	+	AY196326 AY040220 NM_033226	685462	-	AF212247|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK301908|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##BC024162|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##NM_030790|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##BC006321|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ893514|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ896493|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF503339|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK027596|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##NM_000293|PHKB|5257|phosphorylase kinase, beta##NM_001031835|PHKB|5257|phosphorylase kinase, beta##X84908|PHKB|5257|phosphorylase kinase, beta##CR936710|PHKB|5257|phosphorylase kinase, beta##BC033657|PHKB|5257|phosphorylase kinase, beta##AK309226|PHKB|5257|phosphorylase kinase, beta##AY196326|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040220|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##NM_033226|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12	0.0	
chr19	51059703	51059844	reg1015554.p1	4.098	+	CU688154 TSC_hg19_v1_chr19_-_51017942 BC066359 NM_001024656	-41908	-	TSC_hg19_v1_chr19_-_51017156 NM_001114598	-42618	-	AF247787 NM_138334 TSC_hg19_v1_chr19_-_51014412 BC051380 BC062416 AK131052	-45363	-	BC131897 NM_001080457	11517	-	AL136594 NM_032298	81528	-	NM_001160328 NM_001160329 BC031067 BC028379 TSC_hg19_v1_chr19_-_51143094	83352	-	BC066359|ASPDH|554235|aspartate dehydrogenase domain containing##NM_001024656|ASPDH|554235|aspartate dehydrogenase domain containing##NM_001114598|ASPDH|554235|aspartate dehydrogenase domain containing##AF247787|JOSD2|126119|Josephin domain containing 2##NM_138334|JOSD2|126119|Josephin domain containing 2##BC051380|JOSD2|126119|Josephin domain containing 2##BC062416|JOSD2|126119|Josephin domain containing 2##AK131052|JOSD2|126119|Josephin domain containing 2##BC131897|LRRC4B|94030|leucine rich repeat containing 4B##NM_001080457|LRRC4B|94030|leucine rich repeat containing 4B##AL136594|SYT3|84258|synaptotagmin III##NM_032298|SYT3|84258|synaptotagmin III##NM_001160328|SYT3|84258|synaptotagmin III##NM_001160329|SYT3|84258|synaptotagmin III##BC031067|SYT3|84258|synaptotagmin III##BC028379|SYT3|84258|synaptotagmin III	0.656368	CTCF.p2:15:0.342	CTCF.p2:-60:0.314
chr19	6675083	6675228	reg1024753.p2	4.098	+	AF064090 NM_003807 NM_172014	-4557	-	TSC_hg19_v1_chr19_-_6670094 CR541854 CR541871 AB528780 AF036581 AY028261 AY358812 BC018058 AK292037	-5031	-	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	-83997	-	TSC_hg19_v1_chr19_-_6720662 BC063852 BC150179 BC150200 K02765 AK304071 BC150299 NM_000064 AK299114	45501	-	AL365404 TSC_hg19_v1_chr19_-_6737583	62420	-	TSC_hg19_v1_chr19_-_6737592 AK291968	62440	-	AF064090|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_003807|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_172014|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541854|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541871|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF036581|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY028261|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY358812|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC018058|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AK292037|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule##BC063852|C3|718|complement component 3##BC150179|C3|718|complement component 3##BC150200|C3|718|complement component 3##K02765|C3|718|complement component 3##AK304071|C3|718|complement component 3##BC150299|C3|718|complement component 3##NM_000064|C3|718|complement component 3##AL365404|GPR108|56927|G protein-coupled receptor 108##AK291968|GPR108|56927|G protein-coupled receptor 108	0.0	
chr21	38226861	38227000	reg1037800.p1	4.098	+	NM_005069 NM_009586 BC110444	-154925	+	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	-155490	+	AJ566766 NM_001146077	-278064	-	TSC_hg19_v1_chr21_-_38338991 AK307940 NM_001242784	111929	-	AJ001864 TSC_hg19_v1_chr21_-_38352974	126020	-	TSC_hg19_v1_chr21_-_38353235 NM_001242785	126310	-	NM_005069|SIM2|6493|single-minded homolog 2 (Drosophila)##NM_009586|SIM2|6493|single-minded homolog 2 (Drosophila)##BC110444|SIM2|6493|single-minded homolog 2 (Drosophila)##AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14##AK307940|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_001242784|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##AJ001864|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_001242785|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)	0.898526	CTCF.p2:28:0.899
chr2	239957276	239957451	reg1003888.p2	4.098	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	-200600	+	TSC_hg19_v1_chr2_+_239335693 AF156777	-621674	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	-621757	+	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	365285	-	TSC_hg19_v1_chr2_-_240322695 BC039904	365335	-	TSC_hg19_v1_chr2_-_240323341 AK308791	365985	-	BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)##AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AK308791|HDAC4|9759|histone deacetylase 4	0.014044	
chr6	43463239	43463344	reg1033277.p1	4.098	+	AK127338 NM_001146017	-6024	+	TSC_hg19_v1_chr6_+_43445324 BC046239	-17943	+	TSC_hg19_v1_chr6_+_43445314 AK024269 AK123398	-17978	+	BC107130 TSC_hg19_v1_chr6_-_43478085 BC108661	14745	-	NM_001012974	15132	-	TSC_hg19_v1_chr6_-_43484665 AL050274 AB463356 AM393648 AM393729 AK021655 AK022757 AK021433 AF162672 AK000946 AK298150 AK308961 BC019297	21306	-	AK127338|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_001146017|TJAP1|93643|tight junction associated protein 1 (peripheral)##BC046239|TJAP1|93643|tight junction associated protein 1 (peripheral)##AK024269|TJAP1|93643|tight junction associated protein 1 (peripheral)##AK123398|TJAP1|93643|tight junction associated protein 1 (peripheral)##BC107130|LRRC73|221424|leucine rich repeat containing 73##BC108661|LRRC73|221424|leucine rich repeat containing 73##NM_001012974|LRRC73|221424|leucine rich repeat containing 73##AL050274|YIPF3|25844|Yip1 domain family, member 3##AM393648|YIPF3|25844|Yip1 domain family, member 3##AM393729|YIPF3|25844|Yip1 domain family, member 3##AK021655|YIPF3|25844|Yip1 domain family, member 3##AK022757|YIPF3|25844|Yip1 domain family, member 3##AK021433|YIPF3|25844|Yip1 domain family, member 3##AF162672|YIPF3|25844|Yip1 domain family, member 3##AK000946|YIPF3|25844|Yip1 domain family, member 3##AK298150|YIPF3|25844|Yip1 domain family, member 3##AK308961|YIPF3|25844|Yip1 domain family, member 3##BC019297|YIPF3|25844|Yip1 domain family, member 3	0.032137	
chr7	129990926	129991058	reg1027048.p3	4.098	+	NM_001127441 NM_001127442 NM_080385 AK093288 AK315256 AX748034 BC039362 AY155230 BC053681 BC042996 AK131191 AY155229	-6328	+	AK290993 NM_001163446 NM_016352 BC052289 AK310933 AK298553 AK298550 AK299023 AY358699 AF095719 AB590729 CU690898 HQ448429	-57996	+	BC007009 NM_001869 BC014571 BC015140 AK293378 U19977 DQ893811 CU675491 BT007403	-84278	+	NM_001868 AK131054 AK291493 AK293366 BC005279 X67318 CU675077 DQ890565 DQ893728 BT007313	29333	+	BC056162 AK314676 TSC_hg19_v1_chr7_-_130080886 BC018789 AK026098 AJ278890 NM_018718 AK298618 AK311382 AF429308 AF429309	89885	-	TSC_hg19_v1_chr7_+_130126173 AK098397 NM_177524 CR627364 BC090049	135124	+	NM_001127441|CPA5|93979|carboxypeptidase A5##NM_001127442|CPA5|93979|carboxypeptidase A5##NM_080385|CPA5|93979|carboxypeptidase A5##AK093288|CPA5|93979|carboxypeptidase A5##AK315256|CPA5|93979|carboxypeptidase A5##BC039362|CPA5|93979|carboxypeptidase A5##AY155230|CPA5|93979|carboxypeptidase A5##BC053681|CPA5|93979|carboxypeptidase A5##BC042996|CPA5|93979|carboxypeptidase A5##AK131191|CPA5|93979|carboxypeptidase A5##AY155229|CPA5|93979|carboxypeptidase A5##AK290993|CPA4|51200|carboxypeptidase A4##NM_001163446|CPA4|51200|carboxypeptidase A4##NM_016352|CPA4|51200|carboxypeptidase A4##BC052289|CPA4|51200|carboxypeptidase A4##AK310933|CPA4|51200|carboxypeptidase A4##AK298553|CPA4|51200|carboxypeptidase A4##AK298550|CPA4|51200|carboxypeptidase A4##AK299023|CPA4|51200|carboxypeptidase A4##AY358699|CPA4|51200|carboxypeptidase A4##AF095719|CPA4|51200|carboxypeptidase A4##HQ448429|CPA4|51200|carboxypeptidase A4##BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)##AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)##U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)##DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)##BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001868|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK131054|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK291493|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK293366|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC005279|CPA1|1357|carboxypeptidase A1 (pancreatic)##X67318|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ890565|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ893728|CPA1|1357|carboxypeptidase A1 (pancreatic)##BT007313|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC056162|CEP41|95681|centrosomal protein 41kDa##AK314676|CEP41|95681|centrosomal protein 41kDa##BC018789|CEP41|95681|centrosomal protein 41kDa##AK026098|CEP41|95681|centrosomal protein 41kDa##AJ278890|CEP41|95681|centrosomal protein 41kDa##NM_018718|CEP41|95681|centrosomal protein 41kDa##AK298618|CEP41|95681|centrosomal protein 41kDa##AK311382|CEP41|95681|centrosomal protein 41kDa##AF429308|CEP41|95681|centrosomal protein 41kDa##AF429309|CEP41|95681|centrosomal protein 41kDa##AK098397|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_177524|MEST|4232|mesoderm specific transcript homolog (mouse)##CR627364|MEST|4232|mesoderm specific transcript homolog (mouse)##BC090049|MEST|4232|mesoderm specific transcript homolog (mouse)	0.0	
chr9	136327109	136327221	reg1035346.p1	4.098	+	NM_001135775 NM_001242369 NM_001242370 NM_017586 AK075416 TSC_hg19_v1_chr9_+_136325120 AK304524 AK074852 AK311325 AK296343 AK075548 BC030558 AJ011373 AY358452 AK298820 CU688906	-2026	+	TSC_hg19_v1_chr9_+_136293730 AJ011374	-33425	+	AJ305314 AJ420810 AJ420811 BC103828 BC103829 BC103830 AY055376 TSC_hg19_v1_chr9_+_136287508 AF414401	-39688	+	DQ891513 DQ894704 AK294974 BC013740 TSC_hg19_v1_chr9_-_136344222 AJ011372 AK225106 AK222919 AK074836 AK096630 Y17803 AK074927 NM_001145099 NM_017585	17063	-	NM_001080483	62902	-	AB011177 NM_001145320	70120	+	NM_001135775|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242369|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242370|C9orf7|11094|chromosome 9 open reading frame 7##NM_017586|C9orf7|11094|chromosome 9 open reading frame 7##AK075416|C9orf7|11094|chromosome 9 open reading frame 7##AK304524|C9orf7|11094|chromosome 9 open reading frame 7##AK074852|C9orf7|11094|chromosome 9 open reading frame 7##AK311325|C9orf7|11094|chromosome 9 open reading frame 7##AK296343|C9orf7|11094|chromosome 9 open reading frame 7##AK075548|C9orf7|11094|chromosome 9 open reading frame 7##BC030558|C9orf7|11094|chromosome 9 open reading frame 7##AJ011373|C9orf7|11094|chromosome 9 open reading frame 7##AY358452|C9orf7|11094|chromosome 9 open reading frame 7##AK298820|C9orf7|11094|chromosome 9 open reading frame 7##AJ011374|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ305314|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ420810|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ420811|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103828|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103829|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103830|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AY055376|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AF414401|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001080483|TMEM8C|389827|transmembrane protein 8C##AB011177|ADAMTSL2|9719|ADAMTS-like 2##NM_001145320|ADAMTSL2|9719|ADAMTS-like 2	0.023275	
chr10	112117318	112117417	reg1018868.p2	4.097	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-52667	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-52774	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-131546	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	140384	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	210125	+	AF067163 TSC_hg19_v1_chr10_+_112344155	226748	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.0	
chr1	223858313	223858426	reg1031058.p2	4.097	+	TSC_hg19_v1_chr1_-_223853404 NM_001143962	-4952	-	TSC_hg19_v1_chr1_-_223853364 BC157893	-4999	-	NM_152610 AK093047 AX747883 BC031066 BC030026 AB464493 CU688810	-291604	+	AK316211 AK297800 NM_001146068	30904	+	TSC_hg19_v1_chr1_+_223900093 BC007686 BC011828 NM_001748	41748	+	M23254 TSC_hg19_v1_chr1_+_223900223 AK303952 AF261089 AK315179 BC021303	41849	+	NM_001143962|CAPN8|388743|calpain 8##BC157893|CAPN8|388743|calpain 8##NM_152610|C1orf65|164127|chromosome 1 open reading frame 65##AK093047|C1orf65|164127|chromosome 1 open reading frame 65##BC031066|C1orf65|164127|chromosome 1 open reading frame 65##BC030026|C1orf65|164127|chromosome 1 open reading frame 65##AK316211|CAPN2|824|calpain 2, (m/II) large subunit##AK297800|CAPN2|824|calpain 2, (m/II) large subunit##NM_001146068|CAPN2|824|calpain 2, (m/II) large subunit##BC007686|CAPN2|824|calpain 2, (m/II) large subunit##BC011828|CAPN2|824|calpain 2, (m/II) large subunit##NM_001748|CAPN2|824|calpain 2, (m/II) large subunit##M23254|CAPN2|824|calpain 2, (m/II) large subunit##AK303952|CAPN2|824|calpain 2, (m/II) large subunit##AF261089|CAPN2|824|calpain 2, (m/II) large subunit##AK315179|CAPN2|824|calpain 2, (m/II) large subunit##BC021303|CAPN2|824|calpain 2, (m/II) large subunit	0.993058	CTCF.p2:-3:0.993
chr15	31523324	31523505	reg1022829.p2	4.097	+	NM_001243538	-365	-	GQ502181 HM135791 NM_001252020	-69986	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-129497	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	95924	+	AJ430383 NM_130901	424127	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	639415	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.0	
chr15	68846618	68846702	reg1010441.p2	4.097	+	TSC_hg19_v1_chr15_-_68724505 AF109681 AF137378 NM_001004439 AK292445 AK304778 AK095863	-122162	-	TSC_hg19_v1_chr15_+_68570434 AK290167	-276236	+	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	-276567	+	TSC_hg19_v1_chr15_+_68871402 NM_006091	24683	+	NM_001190456	62218	+	AK289678 NM_001190457	77666	+	AF109681|ITGA11|22801|integrin, alpha 11##AF137378|ITGA11|22801|integrin, alpha 11##NM_001004439|ITGA11|22801|integrin, alpha 11##AK292445|ITGA11|22801|integrin, alpha 11##AK304778|ITGA11|22801|integrin, alpha 11##AK095863|ITGA11|22801|integrin, alpha 11##AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B##AK289678|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190457|CORO2B|10391|coronin, actin binding protein, 2B	0.0	
chr16	30456805	30456895	reg1034961.p1	4.097	+	CR457335 TSC_hg19_v1_chr16_-_30441339 AK024843 AF212242 AF210430 AY453409 BC001344 NM_024096	-15511	-	TSC_hg19_v1_chr16_+_30419371 AF242768	-37431	+	TSC_hg19_v1_chr16_+_30418926 BC026192 AK311157 AK001405 BC011870	-37809	+	BC016643 BC002381 U43286 TSC_hg19_v1_chr16_-_30457196 AK092003 AK303275 AX747304	332	-	TSC_hg19_v1_chr16_-_30457197 AK093889 AX748354 NM_012248	379	-	TSC_hg19_v1_chr16_+_30484003 NM_001114380 NM_002209 AX794822 AX794826 AK314246	27150	+	CR457335|DCTPP1|79077|dCTP pyrophosphatase 1##AK024843|DCTPP1|79077|dCTP pyrophosphatase 1##AF212242|DCTPP1|79077|dCTP pyrophosphatase 1##AF210430|DCTPP1|79077|dCTP pyrophosphatase 1##AY453409|DCTPP1|79077|dCTP pyrophosphatase 1##BC001344|DCTPP1|79077|dCTP pyrophosphatase 1##NM_024096|DCTPP1|79077|dCTP pyrophosphatase 1##AF242768|ZNF771|51333|zinc finger protein 771##BC026192|ZNF771|51333|zinc finger protein 771##BC011870|ZNF771|51333|zinc finger protein 771##BC016643|SEPHS2|22928|selenophosphate synthetase 2##BC002381|SEPHS2|22928|selenophosphate synthetase 2##U43286|SEPHS2|22928|selenophosphate synthetase 2##AK092003|SEPHS2|22928|selenophosphate synthetase 2##AK303275|SEPHS2|22928|selenophosphate synthetase 2##AK093889|SEPHS2|22928|selenophosphate synthetase 2##NM_012248|SEPHS2|22928|selenophosphate synthetase 2##NM_001114380|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##NM_002209|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK314246|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)	0.027343	
chr19	54599967	54600080	reg1028986.p1	4.097	+	DQ479398 NM_001135686	-15390	-	FN398145 FJ584316 FJ584317 FJ584318 FJ584319 FJ584320 FJ882051 DQ479397 BC100942 BC100943 AX721201 AY358542 NM_198481	-32903	-	AF288386 AF361352 DQ895210 EU176325 EU176667 TSC_hg19_v1_chr19_+_54496186	-103930	+	TSC_hg19_v1_chr19_-_54604114 AF391163 AF474153 DQ893697 DQ894733 AF391162 AK091111 AX746784 AK311307 AK130199 AF391164 AF474152 AF251702 NM_130771 NM_133168 NM_133169 NM_206818	4096	-	TSC_hg19_v1_chr19_+_54606162 AF070653 BC061644 NM_004542 AK289489 BC011021 BC022369 AF044955 CR542143	6143	+	NM_015629 DQ426885 AY040822 BC117389	18804	+	DQ479398|TARM1|441864|T cell-interacting, activating receptor on myeloid cells 1##NM_001135686|TARM1|441864|T cell-interacting, activating receptor on myeloid cells 1##FN398145|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584316|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584317|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584318|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584319|VSTM1|284415|V-set and transmembrane domain containing 1##FJ584320|VSTM1|284415|V-set and transmembrane domain containing 1##FJ882051|VSTM1|284415|V-set and transmembrane domain containing 1##DQ479397|VSTM1|284415|V-set and transmembrane domain containing 1##BC100942|VSTM1|284415|V-set and transmembrane domain containing 1##BC100943|VSTM1|284415|V-set and transmembrane domain containing 1##AY358542|VSTM1|284415|V-set and transmembrane domain containing 1##NM_198481|VSTM1|284415|V-set and transmembrane domain containing 1##AF288386|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##AF361352|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##DQ895210|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##EU176325|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##EU176667|CACNG6|59285|calcium channel, voltage-dependent, gamma subunit 6##AF391163|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF474153|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##DQ893697|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##DQ894733|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF391162|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK091111|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK311307|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AK130199|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF391164|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF474152|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF251702|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_130771|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_133168|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_133169|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##NM_206818|OSCAR|126014|osteoclast associated, immunoglobulin-like receptor##AF070653|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##BC061644|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##NM_004542|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##AK289489|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##BC011021|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##BC022369|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##AF044955|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##CR542143|NDUFA3|4696|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 3, 9kDa##NM_015629|PRPF31|26121|PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae)##AY040822|PRPF31|26121|PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae)##BC117389|PRPF31|26121|PRP31 pre-mRNA processing factor 31 homolog (S. cerevisiae)	0.067602	
chr20	35971247	35971376	reg1037210.p1	4.097	+	TSC_hg19_v1_chr20_+_35918065 BC016822 BC014672	-53226	+	TSC_hg19_v1_chr20_+_35918057 AK292971 NM_001003897 NM_022077	-53276	+	X00094 BC098109 BC098161 BC099727 NM_001184731 NM_021081	-86024	-	TSC_hg19_v1_chr20_+_35973086 AF272982 NM_005417	1782	+	TSC_hg19_v1_chr20_+_35974513 NM_198291 Z18364	3196	+	TSC_hg19_v1_chr20_+_36011960 BC011566	40692	+	BC016822|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC014672|MANBAL|63905|mannosidase, beta A, lysosomal-like##AK292971|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_001003897|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_022077|MANBAL|63905|mannosidase, beta A, lysosomal-like##X00094|GHRH|2691|growth hormone releasing hormone##BC098109|GHRH|2691|growth hormone releasing hormone##BC098161|GHRH|2691|growth hormone releasing hormone##BC099727|GHRH|2691|growth hormone releasing hormone##NM_001184731|GHRH|2691|growth hormone releasing hormone##NM_021081|GHRH|2691|growth hormone releasing hormone##AF272982|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005417|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##BC011566|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	0.0	
chr22	18507515	18507695	reg1010245.p4	4.097	+	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	-344	-	TSC_hg19_v1_chr22_-_18484268 AK127487	-23377	-	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-250271	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	53083	+	TSC_hg19_v1_chr22_+_18560755 NM_001127649 BC016280 BC047320	53162	+	TSC_hg19_v1_chr22_+_18593455 AK056947 NM_001193414 NM_018943	85858	+	AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26##NM_001127649|PEX26|55670|peroxisomal biogenesis factor 26##BC016280|PEX26|55670|peroxisomal biogenesis factor 26##BC047320|PEX26|55670|peroxisomal biogenesis factor 26##AK056947|TUBA8|51807|tubulin, alpha 8##NM_001193414|TUBA8|51807|tubulin, alpha 8##NM_018943|TUBA8|51807|tubulin, alpha 8	0.0	
chr10	104405910	104406090	reg1030725.p2	4.096	+	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	-1716	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	-142181	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	-142281	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	68097	-	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	68345	+	TSC_hg19_v1_chr10_+_104503704 AK300871	97670	+	NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2##AK300871|C10orf26|54838|chromosome 10 open reading frame 26	0.206883	CTCF.p2:91:0.207
chr12	92604124	92604279	reg1034962.p1	4.096	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-64558	-	NM_001920	-1027396	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-1027621	-	AJ845165 AJ845166 NM_001025233	213533	+	AJ845168 NM_001025232	217722	-	NM_001037671 NM_001178097	492417	+	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74	0.0	
chr15	50167711	50167853	reg1032931.p2	4.096	+	TSC_hg19_v1_chr15_+_49913254 NM_001144955 NM_020234 BC018028 AF168717 AK290184 BC093073 BC032535	-254533	+	BC048125 BC048139 AK057362 NM_152647	-254699	-	NM_002009 BC010956 AK313160 M60828 S81661	-452366	+	AB075819 TSC_hg19_v1_chr15_-_50405521	237734	-	TSC_hg19_v1_chr15_-_50411492 BC144298 BC144297 NM_024837	243684	-	TSC_hg19_v1_chr15_+_50474425 AK290262 NM_001159629 NM_003645 AF096290 AK222859 D88308 AK223145 BC057770 CU691220	306708	+	NM_001144955|DTWD1|56986|DTW domain containing 1##NM_020234|DTWD1|56986|DTW domain containing 1##BC018028|DTWD1|56986|DTW domain containing 1##AF168717|DTWD1|56986|DTW domain containing 1##AK290184|DTWD1|56986|DTW domain containing 1##BC093073|DTWD1|56986|DTW domain containing 1##BC032535|DTWD1|56986|DTW domain containing 1##BC048125|C15orf33|196951|chromosome 15 open reading frame 33##BC048139|C15orf33|196951|chromosome 15 open reading frame 33##AK057362|C15orf33|196951|chromosome 15 open reading frame 33##NM_152647|C15orf33|196951|chromosome 15 open reading frame 33##NM_002009|FGF7|2252|fibroblast growth factor 7##BC010956|FGF7|2252|fibroblast growth factor 7##AK313160|FGF7|2252|fibroblast growth factor 7##M60828|FGF7|2252|fibroblast growth factor 7##S81661|FGF7|2252|fibroblast growth factor 7##AB075819|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4##AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2	0.854222	CTCF.p2:7:0.854
chr15	74688840	74689021	reg1027350.p1	4.096	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-28927	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-30395	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-78025	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	37099	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	37382	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	64517	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.0	
chr15	81203544	81203647	reg1029466.p2	4.096	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	-131874	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	-215586	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	-215933	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	78605	-	TSC_hg19_v1_chr15_+_81293344 NM_022566	89749	+	AK302120 BC062471 NM_173528 AK307565	223032	+	AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##NM_022566|MESDC1|59274|mesoderm development candidate 1##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26	0.0	
chr17	70417367	70417519	reg1026198.p1	4.096	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-300203	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-300273	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-300284	+	AK000477 TSC_hg19_v1_chr17_-_70588944	171500	-	AF331643 TSC_hg19_v1_chr17_-_71088816	671373	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	671380	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr19	10450194	10450374	reg1029995.p1	4.096	+	AB075858 BC037428 TSC_hg19_v1_chr19_-_10444206 NM_133452	-6035	-	TSC_hg19_v1_chr19_-_10426678 BC063460 AB528564 BC010155 AK300568 AK097022 NM_001031734	-23597	-	BC044225 BC029904 NM_001103167	-30058	-	AF340060 AF340061 AB463787 BC040123 S50015 AK309643 BC058903 X69819 TSC_hg19_v1_chr19_-_10450307 AK301071 AX746321 X69711 BC034409 BC046121 AK312826 AK226023 NM_002162	25	-	TSC_hg19_v1_chr19_-_10491192 X54637 AK222672 BC014243	40907	-	TSC_hg19_v1_chr19_-_10491245 AK308360 NM_003331 AK303627 AK308379	40995	-	AB075858|RAVER1|125950|ribonucleoprotein, PTB-binding 1##BC037428|RAVER1|125950|ribonucleoprotein, PTB-binding 1##NM_133452|RAVER1|125950|ribonucleoprotein, PTB-binding 1##BC063460|FDX1L|112812|ferredoxin 1-like##BC010155|FDX1L|112812|ferredoxin 1-like##AK300568|FDX1L|112812|ferredoxin 1-like##NM_001031734|FDX1L|112812|ferredoxin 1-like##BC044225|ZGLP1|100125288|zinc finger, GATA-like protein 1##BC029904|ZGLP1|100125288|zinc finger, GATA-like protein 1##NM_001103167|ZGLP1|100125288|zinc finger, GATA-like protein 1##AF340060|ICAM3|3385|intercellular adhesion molecule 3##AF340061|ICAM3|3385|intercellular adhesion molecule 3##BC040123|ICAM3|3385|intercellular adhesion molecule 3##S50015|ICAM3|3385|intercellular adhesion molecule 3##AK309643|ICAM3|3385|intercellular adhesion molecule 3##BC058903|ICAM3|3385|intercellular adhesion molecule 3##X69819|ICAM3|3385|intercellular adhesion molecule 3##AX746321|ICAM3|3385|intercellular adhesion molecule 3##X69711|ICAM3|3385|intercellular adhesion molecule 3##BC034409|ICAM3|3385|intercellular adhesion molecule 3##BC046121|ICAM3|3385|intercellular adhesion molecule 3##AK312826|ICAM3|3385|intercellular adhesion molecule 3##AK226023|ICAM3|3385|intercellular adhesion molecule 3##NM_002162|ICAM3|3385|intercellular adhesion molecule 3##X54637|TYK2|7297|tyrosine kinase 2##AK222672|TYK2|7297|tyrosine kinase 2##BC014243|TYK2|7297|tyrosine kinase 2##AK308360|TYK2|7297|tyrosine kinase 2##NM_003331|TYK2|7297|tyrosine kinase 2##AK303627|TYK2|7297|tyrosine kinase 2##AK308379|TYK2|7297|tyrosine kinase 2	0.0	
chr20	62290050	62290126	reg1022791.p3	4.096	+	TSC_hg19_v1_chr20_+_62289667 AK302508 AK304798 AK299332 BC000673	-407	+	AF217795 NM_016434 NM_032957	-926	+	DQ893121 DQ896397 BC047671 BC021084 BC032527 AF069709 BC056873 TSC_hg19_v1_chr20_-_62284781 AK074860 NM_015894 AK310010 BC009381 BC025234	-5328	-	TSC_hg19_v1_chr20_+_62321100 AL080127	31060	+	TSC_hg19_v1_chr20_+_62328005 NM_003823 AF104419 AY358279 BC017065	37923	+	AF217794 TSC_hg19_v1_chr20_+_62328078 AY124378 AY124379 AB590899 AF134240	38006	+	AK302508|RTEL1|51750|regulator of telomere elongation helicase 1##AK304798|RTEL1|51750|regulator of telomere elongation helicase 1##AK299332|RTEL1|51750|regulator of telomere elongation helicase 1##AF217795|RTEL1|51750|regulator of telomere elongation helicase 1##NM_016434|RTEL1|51750|regulator of telomere elongation helicase 1##NM_032957|RTEL1|51750|regulator of telomere elongation helicase 1##DQ893121|STMN3|50861|stathmin-like 3##DQ896397|STMN3|50861|stathmin-like 3##BC047671|STMN3|50861|stathmin-like 3##BC032527|STMN3|50861|stathmin-like 3##AF069709|STMN3|50861|stathmin-like 3##BC056873|STMN3|50861|stathmin-like 3##AK074860|STMN3|50861|stathmin-like 3##NM_015894|STMN3|50861|stathmin-like 3##AK310010|STMN3|50861|stathmin-like 3##BC009381|STMN3|50861|stathmin-like 3##BC025234|STMN3|50861|stathmin-like 3##AL080127|RTEL1|51750|regulator of telomere elongation helicase 1##NM_003823|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AF104419|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AY358279|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##BC017065|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy##AF134240|TNFRSF6B|8771|tumor necrosis factor receptor superfamily, member 6b, decoy	0.0	
chr22	24921778	24921939	reg1000706.p2	4.096	+	AK314727 CR627429 CR456375 NM_016327 BC131703 TSC_hg19_v1_chr22_+_24891299 AF163312 AB013885 BC033388 AB528843 BC139840 BC139843 CU013080 CU013368	-30617	+	NM_000675 AK123058 EU036693 AK301420 BC013780	-98293	+	TSC_hg19_v1_chr22_+_24819870 EU036694	-101978	+	CU687038 TSC_hg19_v1_chr22_-_24951093 BC053529 AK296893	29187	-	TSC_hg19_v1_chr22_-_24951145 AK054681 AK294972	29285	-	TSC_hg19_v1_chr22_-_24951160 BC070109 NM_031444	29356	-	AK314727|UPB1|51733|ureidopropionase, beta##CR627429|UPB1|51733|ureidopropionase, beta##CR456375|UPB1|51733|ureidopropionase, beta##NM_016327|UPB1|51733|ureidopropionase, beta##BC131703|UPB1|51733|ureidopropionase, beta##AF163312|UPB1|51733|ureidopropionase, beta##AB013885|UPB1|51733|ureidopropionase, beta##BC033388|UPB1|51733|ureidopropionase, beta##BC139840|UPB1|51733|ureidopropionase, beta##BC139843|UPB1|51733|ureidopropionase, beta##CU013080|UPB1|51733|ureidopropionase, beta##CU013368|UPB1|51733|ureidopropionase, beta##NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor##EU036694|ADORA2A|135|adenosine A2a receptor##BC053529|C22orf13|83606|chromosome 22 open reading frame 13##AK296893|C22orf13|83606|chromosome 22 open reading frame 13##AK054681|C22orf13|83606|chromosome 22 open reading frame 13##AK294972|C22orf13|83606|chromosome 22 open reading frame 13##BC070109|C22orf13|83606|chromosome 22 open reading frame 13##NM_031444|C22orf13|83606|chromosome 22 open reading frame 13	0.0	
chr2	3258032	3258154	reg1034346.p1	4.096	+	TSC_hg19_v1_chr2_-_2335085 AK307797	-923009	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	-923128	-	BC031690 TSC_hg19_v1_chr2_-_1946938	-1311187	-	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	123463	-	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	125412	+	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	265205	-	AK307797|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1	0.0	
chr2	89504769	89504862	reg1030878.p1	4.096	+	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-62226	-	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	-212402	-	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	-319725	+	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	8418	-	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	115038	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	572939	+	BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC070334|IGKC|3514|immunoglobulin kappa constant	0.703737	CTCF.p2:7:0.704
chr5	114961956	114962136	reg1032670.p1	4.096	+	TSC_hg19_v1_chr5_-_114961708 AY304583 AY304584 BC019349 AK075218 AK304210 AK027512 NM_001164468 NM_001164469 NM_181836	-252	-	TSC_hg19_v1_chr5_-_114961697 AK074962	-354	-	BC109265 BC109266 NM_021649	-23929	-	D85777 Z31357 BC024241 AK130357 AK314231 TSC_hg19_v1_chr5_-_115152355 AK309390 NM_001801	190317	-	BC011033 TSC_hg19_v1_chr5_-_115177263 AB017507 AB590693 EU554057 BC012266 AK313320 NM_004707	215358	-	TSC_hg19_v1_chr5_+_115177642 NM_001284 BX647735 U91932 BC000804 D63643 BC012614 X99458 DQ891198 DQ894381 AK311843 BT009833 CR450341	215629	+	AY304583|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AY304584|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##BC019349|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK075218|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AK304210|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK027512|TMED7|51014|transmembrane emp24 protein transport domain containing 7##NM_001164468|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_001164469|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_181836|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK074962|TMED7|51014|transmembrane emp24 protein transport domain containing 7##BC109265|TICAM2|353376|toll-like receptor adaptor molecule 2##BC109266|TICAM2|353376|toll-like receptor adaptor molecule 2##NM_021649|TICAM2|353376|toll-like receptor adaptor molecule 2##D85777|CDO1|1036|cysteine dioxygenase, type I##Z31357|CDO1|1036|cysteine dioxygenase, type I##BC024241|CDO1|1036|cysteine dioxygenase, type I##AK130357|CDO1|1036|cysteine dioxygenase, type I##AK314231|CDO1|1036|cysteine dioxygenase, type I##NM_001801|CDO1|1036|cysteine dioxygenase, type I##BC011033|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##AB017507|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##EU554057|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##BC012266|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##AK313320|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##NM_004707|ATG12|9140|ATG12 autophagy related 12 homolog (S. cerevisiae)##NM_001284|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BX647735|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##U91932|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC000804|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##D63643|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC012614|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##X99458|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ891198|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ894381|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##AK311843|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BT009833|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##CR450341|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit	0.0	
chr10	77669921	77670039	reg1034151.p1	4.095	+	AF267860 NM_032024	-127462	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-508415	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-508499	-	AF118141 TSC_hg19_v1_chr10_-_79397246	1727245	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	1727356	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	1727426	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.884767	CTCF.p2:9:0.885
chr10	81789091	81789260	reg1036336.p2	4.095	+	BC022318 NM_003019	-80315	-	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	-418471	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	-469024	-	TSC_hg19_v1_chr10_+_81838420 AK222536 AK023325 BC022252 NM_025125 CR457310	49261	+	BC066348 BC090922 NM_001012973	103082	+	BC117332 BC117334 TSC_hg19_v1_chr10_+_81892485	103282	+	BC022318|SFTPD|6441|surfactant protein D##NM_003019|SFTPD|6441|surfactant protein D##AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##AK222536|FAM213A|80195|family with sequence similarity 213, member A##AK023325|FAM213A|80195|family with sequence similarity 213, member A##BC022252|FAM213A|80195|family with sequence similarity 213, member A##NM_025125|FAM213A|80195|family with sequence similarity 213, member A##CR457310|FAM213A|80195|family with sequence similarity 213, member A##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9##BC117332|PLAC9|219348|placenta-specific 9##BC117334|PLAC9|219348|placenta-specific 9	0.827032	CTCF.p2:0:0.827
chr16	77756498	77756678	reg1031398.p1	4.095	+	NM_001105663 NM_001243657 NM_001243660 NM_001243661 TSC_hg19_v1_chr16_+_77756410 AK296963 EU981826	-155	+	AK293831 BC063283 NM_199355	-287618	-	NM_001129979 TSC_hg19_v1_chr16_+_77233375	-523227	+	TSC_hg19_v1_chr16_+_77822482 AK290153 BC033537 NM_020927 AB046796 CU689646	65901	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	299862	+	NM_001244755	306397	+	NM_001105663|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243657|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243660|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243661|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK296963|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##EU981826|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like##AK290153|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##BC033537|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_020927|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AB046796|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A	0.0	
chr19	7104780	7104961	reg1031466.p1	4.095	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-5319	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-35155	+	AK315405 NM_001044387 NM_001044388 NM_024341	-35408	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	189090	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	355137	+	TSC_hg19_v1_chr19_+_7460061 AB011093	355207	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr4	3951802	3951937	reg1029925.p2	4.095	+	J03853 NM_000683	-183574	+	TSC_hg19_v1_chr4_+_3768111 BC142625	-183751	+	TSC_hg19_v1_chr4_-_3534154 BC105074 BC112067 AK292321 NM_002337	-417681	-	BC044637 TSC_hg19_v1_chr4_-_3957162	5286	-	BC130430 BC130432 NM_177998	276748	-	TSC_hg19_v1_chr4_-_4249951 BC007729 NM_032927 AK054701 AK295248 AK296007 BC091482	298079	-	J03853|ADRA2C|152|adrenergic, alpha-2C-, receptor##NM_000683|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC142625|ADRA2C|152|adrenergic, alpha-2C-, receptor##BC105074|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC112067|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##AK292321|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##NM_002337|LRPAP1|4043|low density lipoprotein receptor-related protein associated protein 1##BC044637|FAM86EP|348926|family with sequence similarity 86, member A pseudogene##BC130430|OTOP1|133060|otopetrin 1##BC130432|OTOP1|133060|otopetrin 1##NM_177998|OTOP1|133060|otopetrin 1##BC007729|TMEM128|85013|transmembrane protein 128##NM_032927|TMEM128|85013|transmembrane protein 128##AK295248|TMEM128|85013|transmembrane protein 128##BC091482|TMEM128|85013|transmembrane protein 128	0.980714	CTCF.p2:-22:0.981
chr6	30789825	30789968	reg1033265.p1	4.095	+	AF039067 BT006703 AB591006 AF083421 Y14551 BC000844 BC005080 S81914 TSC_hg19_v1_chr6_-_30712325 AK222588 AK314162 NM_003897	-77585	-	TSC_hg19_v1_chr6_-_30710463 AF085357 AF089750 AF117234 NM_005803 AK301291 AK000816 AK222530	-79448	-	BC001896 TSC_hg19_v1_chr6_+_30691264 DQ457058 BC029323 BC015889	-98635	+	AK291621 TSC_hg19_v1_chr6_+_30850729	60817	+	BC008716 BC013400 NM_001954	61964	+	NM_013993 L20817 L57508 TSC_hg19_v1_chr6_+_30852354 BC070070 AB210021 L11315	62489	+	AF039067|IER3|8870|immediate early response 3##BT006703|IER3|8870|immediate early response 3##AF083421|IER3|8870|immediate early response 3##Y14551|IER3|8870|immediate early response 3##BC000844|IER3|8870|immediate early response 3##BC005080|IER3|8870|immediate early response 3##S81914|IER3|8870|immediate early response 3##AK222588|IER3|8870|immediate early response 3##AK314162|IER3|8870|immediate early response 3##NM_003897|IER3|8870|immediate early response 3##AF085357|FLOT1|10211|flotillin 1##AF089750|FLOT1|10211|flotillin 1##AF117234|FLOT1|10211|flotillin 1##NM_005803|FLOT1|10211|flotillin 1##AK301291|FLOT1|10211|flotillin 1##AK000816|FLOT1|10211|flotillin 1##AK222530|FLOT1|10211|flotillin 1##BC001896|TUBB|203068|tubulin, beta class I##DQ457058|TUBB|203068|tubulin, beta class I##BC029323|TUBB|203068|tubulin, beta class I##BC015889|TUBB|203068|tubulin, beta class I##AK291621|DDR1|780|discoidin domain receptor tyrosine kinase 1##BC008716|DDR1|780|discoidin domain receptor tyrosine kinase 1##BC013400|DDR1|780|discoidin domain receptor tyrosine kinase 1##NM_001954|DDR1|780|discoidin domain receptor tyrosine kinase 1##NM_013993|DDR1|780|discoidin domain receptor tyrosine kinase 1##L20817|DDR1|780|discoidin domain receptor tyrosine kinase 1##L57508|DDR1|780|discoidin domain receptor tyrosine kinase 1##BC070070|DDR1|780|discoidin domain receptor tyrosine kinase 1##AB210021|DDR1|780|discoidin domain receptor tyrosine kinase 1##L11315|DDR1|780|discoidin domain receptor tyrosine kinase 1	0.997496	CTCF.p2:9:0.997
chr8	101450531	101450711	reg1019109.p2	4.095	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-128336	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-128440	-	AB271913 AB271914 AB029316 NM_015435	-135150	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	121319	-	AK093906 AX748361 NM_152628	211271	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	283185	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr10	97527753	97527933	reg1036522.p1	4.094	+	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	-12303	+	AJ133133 AJ133134 NM_001098175	-56308	+	BC068449 DQ278872 NM_001143973 NM_015631	-73944	-	AK294399 NM_001130446	139878	+	NM_001001732 NM_001159747 AK302377 BC075861	232021	+	TSC_hg19_v1_chr10_+_97803318 BC043175 NM_001134375 NM_001134376 NM_019084 AK092360 AK297264 AX747499	275538	+	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##BC068449|TCTN3|26123|tectonic family member 3##DQ278872|TCTN3|26123|tectonic family member 3##NM_001143973|TCTN3|26123|tectonic family member 3##NM_015631|TCTN3|26123|tectonic family member 3##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B##NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC043175|CCNJ|54619|cyclin J##NM_001134375|CCNJ|54619|cyclin J##NM_001134376|CCNJ|54619|cyclin J##NM_019084|CCNJ|54619|cyclin J##AK092360|CCNJ|54619|cyclin J##AK297264|CCNJ|54619|cyclin J	0.0	
chr11	5618143	5618323	reg1034000.p2	4.094	+	AK290172 NM_001003818 NM_001003819 NM_001198644 NM_001198645 BC047564 BC136871 BC140722 BC144424 AB039903 BC065575 AK293295 AK298301 AK316178	-284	+	NM_058166 AK027664 AK316289 AF220030 CR749260	-889	+	NM_001005162	-16127	+	AB039902 NM_001003827	22940	+	NM_021616 AK027876 AF220143 AF220144	27993	+	NM_130390 AB039904	35264	+	AK290172|TRIM6|117854|tripartite motif containing 6##NM_001003818|TRIM6|117854|tripartite motif containing 6##NM_001003819|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##NM_001198644|TRIM6|117854|tripartite motif containing 6##NM_001198645|TRIM6|117854|tripartite motif containing 6##BC047564|TRIM6|117854|tripartite motif containing 6##BC136871|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##BC140722|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##BC144424|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##AB039903|TRIM6-TRIM34|445372|TRIM6-TRIM34 readthrough##BC065575|TRIM6|117854|tripartite motif containing 6##AK293295|TRIM6|117854|tripartite motif containing 6##AK298301|TRIM6|117854|tripartite motif containing 6##AK316178|TRIM6|117854|tripartite motif containing 6##NM_058166|TRIM6|117854|tripartite motif containing 6##AK027664|TRIM6|117854|tripartite motif containing 6##AK316289|TRIM6|117854|tripartite motif containing 6##AF220030|TRIM6|117854|tripartite motif containing 6##CR749260|TRIM6|117854|tripartite motif containing 6##NM_001005162|OR52B6|340980|olfactory receptor, family 52, subfamily B, member 6##AB039902|TRIM34|53840|tripartite motif containing 34##NM_001003827|TRIM34|53840|tripartite motif containing 34##NM_021616|TRIM34|53840|tripartite motif containing 34##AK027876|TRIM34|53840|tripartite motif containing 34##AF220143|TRIM34|53840|tripartite motif containing 34##AF220144|TRIM34|53840|tripartite motif containing 34##NM_130390|TRIM34|53840|tripartite motif containing 34##AB039904|TRIM34|53840|tripartite motif containing 34	0.0	
chr13	76593621	76593742	reg1034311.p2	4.094	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-258841	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-383211	+	AF330045 NM_005358	-399112	+	BC013764 TSC_hg19_v1_chr13_-_77460431	866719	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	866926	-	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	972488	+	NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5	0.189406	
chr14	50470365	50470486	reg1021438.p2	4.094	+	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-110019	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-110592	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	-110607	+	AK091232 AX746864 NM_001012706	3812	-	AF390030 NM_001014830	88935	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	112845	-	AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6##AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D	0.0	
chr14	65879703	65879798	reg1014882.p3	4.094	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-25	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-262	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-424	-	AB037806 AF272663 NM_001024218 NM_020806	1094374	+	TSC_hg19_v1_chr14_+_66974859 AK025169	1095103	+	TSC_hg19_v1_chr14_+_66974870 AK315569	1095119	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.0	
chr2	202227245	202227400	reg1034679.p1	4.094	+	AK124115 BC031603 NM_001127391 NM_139163 AK292283	-5229	-	NM_033356 X98173	-102066	+	NM_001080125 AF422926 BC068050 AF422925 AF422929 X98172 AY429525	-104525	+	TSC_hg19_v1_chr2_-_202316179 AK314384 AK054763	88825	-	TSC_hg19_v1_chr2_-_202316274 AB038951 BC040668 BC041330 BC048093 NM_015049 AL832573	88966	-	AK027637 NM_001206864 NM_018571 TSC_hg19_v1_chr2_+_202316442 AK290457 BC008302 AY093697 AB038950 BC090871	89150	+	AK124115|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##BC031603|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_001127391|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_139163|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##AK292283|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_033356|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98173|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001080125|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422926|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC068050|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422929|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98172|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK314384|TRAK2|66008|trafficking protein, kinesin binding 2##AK054763|TRAK2|66008|trafficking protein, kinesin binding 2##AB038951|TRAK2|66008|trafficking protein, kinesin binding 2##BC040668|TRAK2|66008|trafficking protein, kinesin binding 2##BC041330|TRAK2|66008|trafficking protein, kinesin binding 2##BC048093|TRAK2|66008|trafficking protein, kinesin binding 2##NM_015049|TRAK2|66008|trafficking protein, kinesin binding 2##AL832573|TRAK2|66008|trafficking protein, kinesin binding 2##AK027637|STRADB|55437|STE20-related kinase adaptor beta##NM_001206864|STRADB|55437|STE20-related kinase adaptor beta##NM_018571|STRADB|55437|STE20-related kinase adaptor beta##AK290457|STRADB|55437|STE20-related kinase adaptor beta##BC008302|STRADB|55437|STE20-related kinase adaptor beta##AY093697|STRADB|55437|STE20-related kinase adaptor beta##AB038950|STRADB|55437|STE20-related kinase adaptor beta##BC090871|STRADB|55437|STE20-related kinase adaptor beta	0.0	
chr22	38656525	38656654	reg1032797.p1	4.094	+	NM_001161573	-57563	+	BC015037 TSC_hg19_v1_chr22_+_38598094 AB025247	-58503	+	NM_001161572 NM_001161574 NM_012323 TSC_hg19_v1_chr22_+_38597996 AK002001 BC067751 AK300932 AJ010857	-58612	+	NM_001195071	12080	-	TSC_hg19_v1_chr22_-_38668943 CR749859	12356	-	TSC_hg19_v1_chr22_-_38669012 BC015489 AB097053 AK309071 AK292652 NM_001195072 NM_012264	12419	-	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001195071|TMEM184B|25829|transmembrane protein 184B##CR749859|TMEM184B|25829|transmembrane protein 184B##BC015489|TMEM184B|25829|transmembrane protein 184B##AB097053|TMEM184B|25829|transmembrane protein 184B##AK309071|TMEM184B|25829|transmembrane protein 184B##AK292652|TMEM184B|25829|transmembrane protein 184B##NM_001195072|TMEM184B|25829|transmembrane protein 184B##NM_012264|TMEM184B|25829|transmembrane protein 184B	0.0	
chr22	42854392	42854541	reg1030408.p2	4.094	+	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	-26085	-	BC038245 TSC_hg19_v1_chr22_-_42765218	-89264	-	AB527391 NM_005650 NM_181492	-243089	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	61301	-	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	61348	-	BC041802 AK294584 AL450314 NM_014509 AK295223 BC119650 BC119651 BC127635 BC127636 CR456455 AL589866 AL590118 AL590120 CU013005 CU013293	95480	+	CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK294584|SERHL2|253190|serine hydrolase-like 2##AL450314|SERHL2|253190|serine hydrolase-like 2##NM_014509|SERHL2|253190|serine hydrolase-like 2##AK295223|SERHL2|253190|serine hydrolase-like 2##BC119650|SERHL2|253190|serine hydrolase-like 2##BC119651|SERHL2|253190|serine hydrolase-like 2##BC127635|SERHL2|253190|serine hydrolase-like 2##BC127636|SERHL2|253190|serine hydrolase-like 2##CR456455|SERHL2|253190|serine hydrolase-like 2##AL589866|SERHL2|253190|serine hydrolase-like 2##AL590118|SERHL2|253190|serine hydrolase-like 2##AL590120|SERHL2|253190|serine hydrolase-like 2##CU013005|SERHL2|253190|serine hydrolase-like 2##CU013293|SERHL2|253190|serine hydrolase-like 2	0.723258	CTCF.p2:68:0.723
chr2	7965992	7966165	reg1033244.p1	4.094	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-908491	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-948215	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-959375	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	856125	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1011641	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1177743	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr3	15734993	15735083	reg1034050.p1	4.094	+	TSC_hg19_v1_chr3_+_15643452 AK301838	-91575	+	AK297033 TSC_hg19_v1_chr3_+_15643251 NM_000060 AK313252 AK294301 U03274 BC012099 CU680214	-91790	+	BC007440 TSC_hg19_v1_chr3_-_15643077 AJ131753 AK056977 AK299287 AK301546 AK302086 BC001627 AK301990 NM_012260	-91942	-	AY367056 NM_001195099 BC035170 BC048975	63039	-	TSC_hg19_v1_chr3_-_15839678 AK293770 NM_001195098	104644	-	AB002377 NM_015199 TSC_hg19_v1_chr3_-_15901096	165974	-	AK301838|BTD|686|biotinidase##AK297033|BTD|686|biotinidase##NM_000060|BTD|686|biotinidase##AK313252|BTD|686|biotinidase##AK294301|BTD|686|biotinidase##U03274|BTD|686|biotinidase##BC012099|BTD|686|biotinidase##BC007440|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AJ131753|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK056977|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK301546|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK302086|HACL1|26061|2-hydroxyacyl-CoA lyase 1##BC001627|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK301990|HACL1|26061|2-hydroxyacyl-CoA lyase 1##NM_012260|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AY367056|ANKRD28|23243|ankyrin repeat domain 28##NM_001195099|ANKRD28|23243|ankyrin repeat domain 28##BC035170|ANKRD28|23243|ankyrin repeat domain 28##BC048975|ANKRD28|23243|ankyrin repeat domain 28##AK293770|ANKRD28|23243|ankyrin repeat domain 28##NM_001195098|ANKRD28|23243|ankyrin repeat domain 28##AB002377|ANKRD28|23243|ankyrin repeat domain 28##NM_015199|ANKRD28|23243|ankyrin repeat domain 28	0.036849	
chr7	20022772	20022953	reg1006836.p2	4.094	+	BX648384 NM_152774	-210459	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	-274216	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	-837849	-	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	234118	-	AK295044 TSC_hg19_v1_chr7_+_20370337	347475	+	BC002630 NM_002214 M73780	347872	+	BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##AK295044|ITGB8|3696|integrin, beta 8##BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8	0.0	
chr10	31607887	31607956	reg1022505.p2	4.093	+	TSC_hg19_v1_chr10_+_31607451 BX647794	-485	+	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	-287100	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	-319469	-	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	36	-	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	212	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	2168	+	BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1	0.016868	
chr12	133405475	133405656	reg1034850.p1	4.093	+	TSC_hg19_v1_chr12_-_133405429 BC142658 BC146675 NM_001172557 BC060826	-103	-	TSC_hg19_v1_chr12_-_133405400 NM_005895	-267	-	TSC_hg19_v1_chr12_-_133404955 D63997 AB027133	-586	-	TSC_hg19_v1_chr12_-_133464153 AK001658 AK302785 AK304333 AF170724	58607	-	AK027687 TSC_hg19_v1_chr12_-_133464201 NM_001161344 NM_001161345 NM_001161346 NM_001161347 NM_018223	58646	-	BC020877 TSC_hg19_v1_chr12_-_133532893 AL832191 NM_183238 AK027873 AK122878 AL832623 NM_001164715	127308	-	BC142658|GOLGA3|2802|golgin A3##BC146675|GOLGA3|2802|golgin A3##NM_001172557|GOLGA3|2802|golgin A3##BC060826|GOLGA3|2802|golgin A3##NM_005895|GOLGA3|2802|golgin A3##D63997|GOLGA3|2802|golgin A3##AB027133|GOLGA3|2802|golgin A3##AK001658|CHFR|55743|checkpoint with forkhead and ring finger domains##AK302785|CHFR|55743|checkpoint with forkhead and ring finger domains##AK304333|CHFR|55743|checkpoint with forkhead and ring finger domains##AF170724|CHFR|55743|checkpoint with forkhead and ring finger domains##AK027687|CHFR|55743|checkpoint with forkhead and ring finger domains##NM_001161344|CHFR|55743|checkpoint with forkhead and ring finger domains##NM_001161345|CHFR|55743|checkpoint with forkhead and ring finger domains##NM_001161346|CHFR|55743|checkpoint with forkhead and ring finger domains##NM_001161347|CHFR|55743|checkpoint with forkhead and ring finger domains##NM_018223|CHFR|55743|checkpoint with forkhead and ring finger domains##BC020877|ZNF605|100289635|zinc finger protein 605##AL832191|ZNF605|100289635|zinc finger protein 605##NM_183238|ZNF605|100289635|zinc finger protein 605##AK027873|ZNF605|100289635|zinc finger protein 605##AK122878|ZNF605|100289635|zinc finger protein 605##AL832623|ZNF605|100289635|zinc finger protein 605##NM_001164715|ZNF605|100289635|zinc finger protein 605	0.0	
chr2	11005063	11005231	reg1028371.p2	4.093	+	TSC_hg19_v1_chr2_-_10952912 AK294347 D49489 BC001312 NM_005742	-52227	-	TSC_hg19_v1_chr2_-_10952851 DQ891186 DQ894369 AK289428	-52319	-	TSC_hg19_v1_chr2_-_10942759 AK225496 U79278	-62443	-	BC026110 NM_002236 TSC_hg19_v1_chr2_+_11052109	46938	+	AK057872 NM_182500 BC120930 AK292828	268069	+	BC027625 NM_152391 TSC_hg19_v1_chr2_+_11295562	290404	+	AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6##D49489|PDIA6|10130|protein disulfide isomerase family A, member 6##BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6##NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6##AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6##AK225496|PDIA6|10130|protein disulfide isomerase family A, member 6##U79278|PDIA6|10130|protein disulfide isomerase family A, member 6##BC026110|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##NM_002236|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##AK057872|C2orf50|130813|chromosome 2 open reading frame 50##NM_182500|C2orf50|130813|chromosome 2 open reading frame 50##BC120930|C2orf50|130813|chromosome 2 open reading frame 50##AK292828|C2orf50|130813|chromosome 2 open reading frame 50##BC027625|PQLC3|130814|PQ loop repeat containing 3##NM_152391|PQLC3|130814|PQ loop repeat containing 3	0.0	
chr2	208926929	208927066	reg1036967.p1	4.093	+	TSC_hg19_v1_chr2_-_208890252 BX648983 NM_001080475	-36733	-	U43318 AB043702 NM_003468	-292901	-	TSC_hg19_v1_chr2_+_208576466 BC067253	-350497	+	HQ258094 U66583 BC117338 BC117340 NM_006891	62199	-	AB590655 U66582 BC074954 BC074955 NM_020989	67483	-	BC074944 BC074945 BC117384 BC117388 NM_005210	83879	-	BX648983|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##NM_001080475|PLEKHM3|389072|pleckstrin homology domain containing, family M, member 3##U43318|FZD5|7855|frizzled family receptor 5##AB043702|FZD5|7855|frizzled family receptor 5##NM_003468|FZD5|7855|frizzled family receptor 5##BC067253|CCNYL1|151195|cyclin Y-like 1##HQ258094|CRYGD|1421|crystallin, gamma D##U66583|CRYGD|1421|crystallin, gamma D##BC117338|CRYGD|1421|crystallin, gamma D##BC117340|CRYGD|1421|crystallin, gamma D##NM_006891|CRYGD|1421|crystallin, gamma D##U66582|CRYGC|1420|crystallin, gamma C##BC074954|CRYGC|1420|crystallin, gamma C##BC074955|CRYGC|1420|crystallin, gamma C##NM_020989|CRYGC|1420|crystallin, gamma C##BC074944|CRYGB|1419|crystallin, gamma B##BC074945|CRYGB|1419|crystallin, gamma B##BC117384|CRYGB|1419|crystallin, gamma B##BC117388|CRYGB|1419|crystallin, gamma B##NM_005210|CRYGB|1419|crystallin, gamma B	0.713469	CTCF.p2:20:0.713
chr5	145510160	145510292	reg1031505.p1	4.093	+	HQ258084 BC130586 BC130588 BC144387 BC144388 BC144389 BC144392 NM_001029869	-26315	-	TSC_hg19_v1_chr5_+_145317317 AL833297	-192858	+	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	-194055	+	U56252 TSC_hg19_v1_chr5_-_145523016	12783	-	TSC_hg19_v1_chr5_-_145562187 BC131798 BC110084 D84223 BC151214 AK304134 BC068041 AK293750 AK025441 AK295874 AF151026 BC105581 AK315178 BC150213	51913	-	TSC_hg19_v1_chr5_-_145562214 AB037773 BC152422	51995	-	HQ258084|PLAC8L1|153770|PLAC8-like 1##BC130586|PLAC8L1|153770|PLAC8-like 1##BC130588|PLAC8L1|153770|PLAC8-like 1##BC144387|PLAC8L1|153770|PLAC8-like 1##BC144388|PLAC8L1|153770|PLAC8-like 1##BC144389|PLAC8L1|153770|PLAC8-like 1##BC144392|PLAC8L1|153770|PLAC8-like 1##NM_001029869|PLAC8L1|153770|PLAC8-like 1##AL833297|SH3RF2|153769|SH3 domain containing ring finger 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2##U56252|LARS|51520|leucyl-tRNA synthetase##BC131798|LARS|51520|leucyl-tRNA synthetase##BC110084|LARS|51520|leucyl-tRNA synthetase##D84223|LARS|51520|leucyl-tRNA synthetase##BC151214|LARS|51520|leucyl-tRNA synthetase##AK304134|LARS|51520|leucyl-tRNA synthetase##BC068041|LARS|51520|leucyl-tRNA synthetase##AK293750|LARS|51520|leucyl-tRNA synthetase##AK025441|LARS|51520|leucyl-tRNA synthetase##AK295874|LARS|51520|leucyl-tRNA synthetase##AF151026|LARS|51520|leucyl-tRNA synthetase##BC105581|LARS|51520|leucyl-tRNA synthetase##AK315178|LARS|51520|leucyl-tRNA synthetase##BC150213|LARS|51520|leucyl-tRNA synthetase##AB037773|LARS|51520|leucyl-tRNA synthetase##BC152422|LARS|51520|leucyl-tRNA synthetase	0.960111	CTCF.p2:-12:0.960
chrX	129242628	129242700	reg1033800.p1	4.093	+	NM_021946 TSC_hg19_v1_chrX_+_129139243 AK074089	-103458	+	TSC_hg19_v1_chrX_+_129040144 NM_001166221 NM_006649 AK291918 AK298578 BC009649 BC001149 AK304563 BC014987 AF039694 AB590128 CU679427 DQ892549 DQ895760	-202533	+	TSC_hg19_v1_chrX_-_128977856 AL161962 AK096967 AF151847 AY358558 BC006200 BC012826 BC003128 AK001112 AY952881 NM_016032	-264836	-	TSC_hg19_v1_chrX_-_129244438 U32645	1780	-	TSC_hg19_v1_chrX_-_129244474 NM_001421	1814	-	BC017194 AK314972 NM_001127197 TSC_hg19_v1_chrX_-_129244713	2023	-	NM_021946|BCORL1|63035|BCL6 corepressor-like 1##AK074089|BCORL1|63035|BCL6 corepressor-like 1##NM_001166221|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##NM_006649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK291918|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK298578|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC009649|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC001149|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AK304563|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##BC014987|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ892549|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##DQ895760|UTP14A|10813|UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast)##AL161962|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK096967|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AF151847|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY358558|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC006200|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC012826|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC003128|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AK001112|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AY952881|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_016032|ZDHHC9|51114|zinc finger, DHHC-type containing 9##U32645|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001421|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##BC017194|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##AK314972|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001127197|ELF4|2000|E74-like factor 4 (ets domain transcription factor)	0.0	
chr11	104125260	104125388	reg1033903.p1	4.092	+	TSC_hg19_v1_chr11_-_104035100 BC030645	-90224	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	-90284	-	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	-90530	-	AF464191 AF464192 AF464193 AF464194 AF464195 AF486844 AF486845 AF486846 AF486847 NM_001191016	644072	-	NM_033306 U28977 U28978	702097	-	TSC_hg19_v1_chr11_-_104839279 U28979 BC008060 U28976 BC017839 U28014 AK225751 Z48810 U25804 AK296081 AK304222 NM_001225	713973	-	BC030645|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##AF464191|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464192|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464193|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464194|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464195|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486844|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486845|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486846|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486847|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_001191016|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_033306|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28977|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28978|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28979|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC008060|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28976|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC017839|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28014|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK225751|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##Z48810|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U25804|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK296081|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK304222|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##NM_001225|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	0.979861	CTCF.p2:-26:0.956
chr1	219611543	219611677	reg1034350.p1	4.092	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-264368	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-264452	+	M19154 TSC_hg19_v1_chr1_+_218519634	-1092005	+	BC036078 TSC_hg19_v1_chr1_-_220101540	489919	-	AB464233 TSC_hg19_v1_chr1_-_220101784	490181	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	490355	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.0	
chr14	59470880	59471005	reg1035349.p2	4.092	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-366196	+	AK302579 NM_001244193 AK310356 AK302718	-564516	+	NM_014749 BC066647	-576211	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	184462	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	460980	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	461114	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.0	
chr16	81619594	81619698	reg1031243.p1	4.092	+	AY172689 NM_030629	-90693	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-140813	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-270996	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	193251	+	TSC_hg19_v1_chr16_+_81812901 AB208914	193256	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	193284	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr19	36681490	36681580	reg1031829.p1	4.092	+	BC002757 NM_001864	-37765	-	TSC_hg19_v1_chr19_+_36631899 CU680106 BT009775	-49350	+	TSC_hg19_v1_chr19_+_36631021 BC000592 BC011903 BC064998 BC017308 AY007141 BC023643 BC021933	-50502	+	BC068453 NM_152477 AK308212	24026	-	NM_001099638 NM_001099639 NM_007145 TSC_hg19_v1_chr19_+_36705624	24039	+	AK094310 NM_001042474	24448	-	BC002757|COX7A1|1346|cytochrome c oxidase subunit VIIa polypeptide 1 (muscle)##NM_001864|COX7A1|1346|cytochrome c oxidase subunit VIIa polypeptide 1 (muscle)##BT009775|CAPNS1|826|calpain, small subunit 1##BC000592|CAPNS1|826|calpain, small subunit 1##BC011903|CAPNS1|826|calpain, small subunit 1##BC064998|CAPNS1|826|calpain, small subunit 1##BC017308|CAPNS1|826|calpain, small subunit 1##AY007141|CAPNS1|826|calpain, small subunit 1##BC023643|CAPNS1|826|calpain, small subunit 1##BC021933|CAPNS1|826|calpain, small subunit 1##BC068453|ZNF565|147929|zinc finger protein 565##NM_152477|ZNF565|147929|zinc finger protein 565##AK308212|ZNF565|147929|zinc finger protein 565##NM_001099638|ZNF146|7705|zinc finger protein 146##NM_001099639|ZNF146|7705|zinc finger protein 146##NM_007145|ZNF146|7705|zinc finger protein 146##AK094310|ZNF565|147929|zinc finger protein 565##NM_001042474|ZNF565|147929|zinc finger protein 565	0.923571	CTCF.p2:-5:0.924
chr2	173836887	173837009	reg1034327.p2	4.092	+	BC040183 NM_001100397 AK311500 AK311697	-150622	+	TSC_hg19_v1_chr2_+_173600637 AB027471 AK313084 BC024004 AB590290 DQ890549 DQ894011	-236276	+	AB209681 TSC_hg19_v1_chr2_+_173600599 U78516	-236348	+	AB208974 TSC_hg19_v1_chr2_+_173940455	103500	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	103598	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	103700	+	BC040183|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##NM_001100397|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311500|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311697|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB027471|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK313084|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##BC024004|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ890549|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ894011|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB209681|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##U78516|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB208974|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK	0.0	
chr2	8195134	8195314	reg1035220.p2	4.092	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1137637	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1177361	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1188521	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	626979	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	782495	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	948597	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr6	79788274	79788422	reg1031313.p2	4.092	+	TSC_hg19_v1_chr6_-_79787972 AK057039 NM_017934	-291	-	BC021905 TSC_hg19_v1_chr6_-_79787918	-430	-	TSC_hg19_v1_chr6_-_79787888 BC137488 BC144670	-460	-	L40357 TSC_hg19_v1_chr6_-_79944391 AF401520 AF274949 BC009529	156010	-	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	156077	-	TSC_hg19_v1_chr6_-_80247114 AK299314 BX648161 BC050327 NM_001122769 NM_181714	458781	-	AK057039|PHIP|55023|pleckstrin homology domain interacting protein##NM_017934|PHIP|55023|pleckstrin homology domain interacting protein##BC021905|PHIP|55023|pleckstrin homology domain interacting protein##BC137488|PHIP|55023|pleckstrin homology domain interacting protein##BC144670|PHIP|55023|pleckstrin homology domain interacting protein##L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3##BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3##AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3##AK299314|LCA5|167691|Leber congenital amaurosis 5##BX648161|LCA5|167691|Leber congenital amaurosis 5##BC050327|LCA5|167691|Leber congenital amaurosis 5##NM_001122769|LCA5|167691|Leber congenital amaurosis 5##NM_181714|LCA5|167691|Leber congenital amaurosis 5	0.0	
chr7	964423	964542	reg1035434.p1	4.092	+	AK300644 AK300859 TSC_hg19_v1_chr7_-_960513	-3968	-	TSC_hg19_v1_chr7_+_916249 BC003550 AK023560 AF132954	-48212	+	TSC_hg19_v1_chr7_+_916188 NM_015949	-48279	+	TSC_hg19_v1_chr7_-_994129 AB587419 BC033747	29633	-	TSC_hg19_v1_chr7_-_994317 NM_006869	29831	-	TSC_hg19_v1_chr7_-_994377 AJ006422	29981	-	AK300644|ADAP1|11033|ArfGAP with dual PH domains 1##AK300859|ADAP1|11033|ArfGAP with dual PH domains 1##BC003550|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK023560|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AF132954|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##NM_015949|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##BC033747|ADAP1|11033|ArfGAP with dual PH domains 1##NM_006869|ADAP1|11033|ArfGAP with dual PH domains 1##AJ006422|ADAP1|11033|ArfGAP with dual PH domains 1	0.0	
chr10	27001281	27001383	reg1037981.p1	4.091	+	TSC_hg19_v1_chr10_+_26986597 AK024802 AK223414 AB210838 NM_014317 BC063635 BC049211 AF118395	-14686	+	AK096048 TSC_hg19_v1_chr10_-_26986612	-14748	-	TSC_hg19_v1_chr10_+_26727703 AY152730	-273626	+	TSC_hg19_v1_chr10_-_27057776 AK315914	56485	-	AB529081 FJ380057 FJ380058 FJ380059 TSC_hg19_v1_chr10_-_27149883 AF540955 AK296751 AF001628 AF006516 BC013238 U87166 AB209268 BC024254 AK291823	148508	-	TSC_hg19_v1_chr10_-_27149916 AF260262 AK298646 AK126803 AB040151	148607	-	AK024802|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK223414|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AB210838|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##NM_014317|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC063635|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC049211|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AF118395|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AY152730|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK315914|ABI1|10006|abl-interactor 1##FJ380057|ABI1|10006|abl-interactor 1##FJ380058|ABI1|10006|abl-interactor 1##FJ380059|ABI1|10006|abl-interactor 1##AF540955|ABI1|10006|abl-interactor 1##AK296751|ABI1|10006|abl-interactor 1##AF001628|ABI1|10006|abl-interactor 1##AF006516|ABI1|10006|abl-interactor 1##BC013238|ABI1|10006|abl-interactor 1##U87166|ABI1|10006|abl-interactor 1##AB209268|ABI1|10006|abl-interactor 1##BC024254|ABI1|10006|abl-interactor 1##AK291823|ABI1|10006|abl-interactor 1##AF260262|ABI1|10006|abl-interactor 1##AK298646|ABI1|10006|abl-interactor 1##AK126803|ABI1|10006|abl-interactor 1##AB040151|ABI1|10006|abl-interactor 1	0.870117	CTCF.p2:15:0.870
chr11	118230287	118230371	reg1031920.p1	4.091	+	BC062695 TSC_hg19_v1_chr11_+_118230319	-10	+	TSC_hg19_v1_chr11_+_118230314 NM_001204077 NM_004788 BC112367	-24	+	AK299997 NM_000073 AK313966 AK315895 AK310622 BC069685 X04145 X60492 AK223314 AK310578 BC113830	-15245	+	TSC_hg19_v1_chr11_+_118230324 BC111417 BC052643 BC010938	3	+	AK296369 BC030973 TSC_hg19_v1_chr11_+_118230348 AF087968 D50916	27	+	BC039240 TSC_hg19_v1_chr11_+_118257240	26907	+	BC062695|UBE4A|9354|ubiquitination factor E4A##NM_001204077|UBE4A|9354|ubiquitination factor E4A##NM_004788|UBE4A|9354|ubiquitination factor E4A##BC112367|UBE4A|9354|ubiquitination factor E4A##NM_000073|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK313966|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK315895|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK310622|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##BC069685|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##X04145|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK223314|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##AK310578|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##BC113830|CD3G|917|CD3g molecule, gamma (CD3-TCR complex)##BC111417|UBE4A|9354|ubiquitination factor E4A##BC052643|UBE4A|9354|ubiquitination factor E4A##BC010938|UBE4A|9354|ubiquitination factor E4A##AK296369|UBE4A|9354|ubiquitination factor E4A##BC030973|UBE4A|9354|ubiquitination factor E4A##AF087968|UBE4A|9354|ubiquitination factor E4A##D50916|UBE4A|9354|ubiquitination factor E4A##BC039240|UBE4A|9354|ubiquitination factor E4A	0.0	
chr20	53674480	53674625	reg1041138.p1	4.091	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-582338	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	-849915	+	TSC_hg19_v1_chr20_+_52824396 NM_002623	-850105	+	NM_080617	905459	-	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	1149235	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	1259472	+	BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##NM_002623|PFDN4|5203|prefoldin subunit 4##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B	0.0	
chr3	100429561	100429689	reg1029963.p1	4.091	+	TSC_hg19_v1_chr3_+_100428396 BC041600 BC023599	-1161	+	TSC_hg19_v1_chr3_+_100428385 BC001483 NM_001195478	-1252	+	NM_001007565 NM_001195479 NM_006070 TSC_hg19_v1_chr3_+_100428337 AK093456 BC009241	-1380	+	CU688850 EU832117 EU832211 AK025204 AL833204 BC030221 TSC_hg19_v1_chr3_-_100712327 NM_015429	282665	-	AF173155 AB593127 NM_016247 DQ980603 DQ980602	609797	-	AM392620 AM393440 TSC_hg19_v1_chr3_-_101232029 AK297356 BC129988 BC062674 BX537943 AL833577 AF199458 NM_001077203 NM_020654	802403	-	BC041600|TFG|10342|TRK-fused gene##BC023599|TFG|10342|TRK-fused gene##BC001483|TFG|10342|TRK-fused gene##NM_001195478|TFG|10342|TRK-fused gene##NM_001007565|TFG|10342|TRK-fused gene##NM_001195479|TFG|10342|TRK-fused gene##NM_006070|TFG|10342|TRK-fused gene##AK093456|TFG|10342|TRK-fused gene##BC009241|TFG|10342|TRK-fused gene##EU832117|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##EU832211|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AK025204|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AL833204|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##BC030221|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##NM_015429|ABI3BP|25890|ABI family, member 3 (NESH) binding protein##AF173155|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AB593127|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##NM_016247|IMPG2|50939|interphotoreceptor matrix proteoglycan 2##AM392620|SENP7|57337|SUMO1/sentrin specific peptidase 7##AM393440|SENP7|57337|SUMO1/sentrin specific peptidase 7##AK297356|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC129988|SENP7|57337|SUMO1/sentrin specific peptidase 7##BC062674|SENP7|57337|SUMO1/sentrin specific peptidase 7##BX537943|SENP7|57337|SUMO1/sentrin specific peptidase 7##AL833577|SENP7|57337|SUMO1/sentrin specific peptidase 7##AF199458|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_001077203|SENP7|57337|SUMO1/sentrin specific peptidase 7##NM_020654|SENP7|57337|SUMO1/sentrin specific peptidase 7	0.0	
chr7	1834916	1835024	reg1029543.p1	4.091	+	NM_001128636	-86173	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-225149	+	AB067495 TSC_hg19_v1_chr7_+_1609735	-225237	+	TSC_hg19_v1_chr7_-_1980177 BC018870	145193	-	AK310481 TSC_hg19_v1_chr7_-_2272542	437565	-	TSC_hg19_v1_chr7_-_2272559 AF083811	437590	-	NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AB067495|KIAA1908|114796|uncharacterized LOC114796##BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AF083811|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.980705	CTCF.p2:13:0.981
chr7	49139322	49139449	reg1033095.p2	4.091	+	AK126220 AY204751 BX647273 NM_152701	-928330	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-1010430	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	-1010585	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	673885	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	993439	-	NM_001161834	996296	+	AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72	0.020103	
chr7	89761291	89761404	reg1035367.p1	4.091	+	BC028365 NM_152706	-1336317	-	BC140826 BC140829 AK056672 AY295769 NM_181646	-1372631	+	BC020600 AF423422 AF423423 AK026806 AK307644 TSC_hg19_v1_chr7_-_87936207 NM_001205315 NM_001205316 NM_024636	-1825133	-	NM_012449 TSC_hg19_v1_chr7_+_89783782 AK308452 BC011802	22390	+	AK304076 TSC_hg19_v1_chr7_+_89783791 AF186249	22465	+	AF455138 NM_001244944 NM_001244945 NM_152999 AK092666 AX747660 TSC_hg19_v1_chr7_+_89841171 AY008443 AY008444 AY008445 NM_001040665 NM_001244946 AK315043	79768	+	BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62##BC140826|ZNF804B|219578|zinc finger protein 804B##BC140829|ZNF804B|219578|zinc finger protein 804B##AK056672|ZNF804B|219578|zinc finger protein 804B##AY295769|ZNF804B|219578|zinc finger protein 804B##NM_181646|ZNF804B|219578|zinc finger protein 804B##BC020600|STEAP4|79689|STEAP family member 4##AF423422|STEAP4|79689|STEAP family member 4##AF423423|STEAP4|79689|STEAP family member 4##AK026806|STEAP4|79689|STEAP family member 4##AK307644|STEAP4|79689|STEAP family member 4##NM_001205315|STEAP4|79689|STEAP family member 4##NM_001205316|STEAP4|79689|STEAP family member 4##NM_024636|STEAP4|79689|STEAP family member 4##NM_012449|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK308452|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC011802|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK304076|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF186249|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AF455138|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244944|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244945|STEAP2|261729|STEAP family member 2, metalloreductase##NM_152999|STEAP2|261729|STEAP family member 2, metalloreductase##AK092666|STEAP2|261729|STEAP family member 2, metalloreductase##AY008443|STEAP2|261729|STEAP family member 2, metalloreductase##AY008444|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001040665|STEAP2|261729|STEAP family member 2, metalloreductase##NM_001244946|STEAP2|261729|STEAP family member 2, metalloreductase##AK315043|STEAP2|261729|STEAP family member 2, metalloreductase	0.199376	
chr9	4741127	4741203	reg1034523.p2	4.091	+	TSC_hg19_v1_chr9_-_4741050 AF086913 AF100785	-107	-	NM_001199856 AK124824	-14928	-	TSC_hg19_v1_chr9_+_4679596 AK000497 NM_017913 AK000646 AK225510 BC014133 CU680796	-61504	+	TSC_hg19_v1_chr9_-_4741203 AB021870 DQ891660 DQ894847 AK027534 BC013771 NM_001199854 AK001951 AK001553 AK298200	8	-	TSC_hg19_v1_chr9_-_4741309 NM_001199852 NM_016282	188	-	NM_001199855	633	-	AF086913|AK3|50808|adenylate kinase 3##AF100785|AK3|50808|adenylate kinase 3##NM_001199856|AK3|50808|adenylate kinase 3##AK124824|AK3|50808|adenylate kinase 3##AK000497|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##NM_017913|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK000646|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK225510|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##BC014133|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AB021870|AK3|50808|adenylate kinase 3##DQ891660|AK3|50808|adenylate kinase 3##DQ894847|AK3|50808|adenylate kinase 3##AK027534|AK3|50808|adenylate kinase 3##BC013771|AK3|50808|adenylate kinase 3##NM_001199854|AK3|50808|adenylate kinase 3##AK001951|AK3|50808|adenylate kinase 3##AK001553|AK3|50808|adenylate kinase 3##AK298200|AK3|50808|adenylate kinase 3##NM_001199852|AK3|50808|adenylate kinase 3##NM_016282|AK3|50808|adenylate kinase 3##NM_001199855|AK3|50808|adenylate kinase 3	0.0	
chr10	18978538	18978665	reg1038279.p1	4.090	+	TSC_hg19_v1_chr10_+_18948359 NM_178815 BC024163 AK027275 AF494061 DQ893166 DQ896464	-30180	+	BC033534 TSC_hg19_v1_chr10_-_18948215	-30404	-	AK074323 BC035778 NM_182543	-38069	-	TSC_hg19_v1_chr10_+_20105360 AK304591 AY358486 NM_032812	1126772	+	NM_006393 Y16241	2207929	-	BC140744 BC144447 NM_001010896 NM_001177483	2456886	-	NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B##BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B##AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B##AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B##AK074323|NSUN6|221078|NOP2/Sun domain family, member 6##BC035778|NSUN6|221078|NOP2/Sun domain family, member 6##NM_182543|NSUN6|221078|NOP2/Sun domain family, member 6##AK304591|PLXDC2|84898|plexin domain containing 2##AY358486|PLXDC2|84898|plexin domain containing 2##NM_032812|PLXDC2|84898|plexin domain containing 2##NM_006393|NEBL|10529|nebulette##Y16241|NEBL|10529|nebulette##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113	0.980561	CTCF.p2:19:0.981
chr11	62308623	62308773	reg1030547.p1	4.090	+	AK312165 NM_003357 BC004481 U01101 DQ893375 DQ896769 X13197 AB590371 CR541780	-122162	+	TSC_hg19_v1_chr11_+_62104919 AK313069 AK091894 AX747239 AK297158 AK090908 AX746674 AK309845 BC064963 BC093070 AF411076 BC021295 AK225802	-203750	+	NM_001083926 NM_025080 TSC_hg19_v1_chr11_+_62104878	-203873	+	TSC_hg19_v1_chr11_-_62314221 BC012477 BC000926 AK095346	5538	-	TSC_hg19_v1_chr11_-_62314314 AK300376 BC128460 NM_001620 NM_024060	5616	-	DQ185040 BT006677 CR407625 BC006509 BC006520 CU674184 CU677463 CU680700 BC000384 DQ891103 DQ894284 Z11531 AB527934 BC009865 BC015813 BC018857 BC018853 BC028179 TSC_hg19_v1_chr11_-_62341334 BC013918 AK092787 AK299876 AY542307 BC067738 AK129569 AK129618 AK300729 X63526 AK130026 AK300686 BC031012	32626	-	AK312165|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##NM_003357|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##BC004481|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##U01101|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ893375|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##DQ896769|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##X13197|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##CR541780|SCGB1A1|7356|secretoglobin, family 1A, member 1 (uteroglobin)##AK313069|ASRGL1|80150|asparaginase like 1##AK091894|ASRGL1|80150|asparaginase like 1##AK297158|ASRGL1|80150|asparaginase like 1##AK090908|ASRGL1|80150|asparaginase like 1##AK309845|ASRGL1|80150|asparaginase like 1##BC064963|ASRGL1|80150|asparaginase like 1##BC093070|ASRGL1|80150|asparaginase like 1##AF411076|ASRGL1|80150|asparaginase like 1##BC021295|ASRGL1|80150|asparaginase like 1##AK225802|ASRGL1|80150|asparaginase like 1##NM_001083926|ASRGL1|80150|asparaginase like 1##NM_025080|ASRGL1|80150|asparaginase like 1##BC012477|AHNAK|79026|AHNAK nucleoprotein##BC000926|AHNAK|79026|AHNAK nucleoprotein##AK095346|AHNAK|79026|AHNAK nucleoprotein##AK300376|AHNAK|79026|AHNAK nucleoprotein##BC128460|AHNAK|79026|AHNAK nucleoprotein##NM_001620|AHNAK|79026|AHNAK nucleoprotein##NM_024060|AHNAK|79026|AHNAK nucleoprotein##DQ185040|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BT006677|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##CR407625|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006509|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC006520|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC000384|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ891103|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##DQ894284|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##Z11531|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC009865|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC015813|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018857|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC018853|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC028179|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC013918|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK092787|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK299876|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AY542307|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC067738|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129569|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK129618|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300729|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##X63526|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK130026|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##AK300686|EEF1G|1937|eukaryotic translation elongation factor 1 gamma##BC031012|EEF1G|1937|eukaryotic translation elongation factor 1 gamma	0.0	
chr1	184532565	184532681	reg1031397.p1	4.090	+	TSC_hg19_v1_chr1_+_184356377 AK056487	-176235	+	AF312864 TSC_hg19_v1_chr1_+_184356245 AY258286	-176357	+	TSC_hg19_v1_chr1_+_184356194 BC028567	-176426	+	BC144149 BC144150 AF288393 TSC_hg19_v1_chr1_-_184723746 AB385131	191134	-	TSC_hg19_v1_chr1_-_184723964 BC070173 BC105586	191342	-	AK225171 TSC_hg19_v1_chr1_-_184723985 AK315118	191361	-	AK056487|C1orf21|81563|chromosome 1 open reading frame 21##AF312864|C1orf21|81563|chromosome 1 open reading frame 21##AY258286|C1orf21|81563|chromosome 1 open reading frame 21##BC028567|C1orf21|81563|chromosome 1 open reading frame 21##BC144149|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC144150|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AF288393|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC070173|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC105586|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK225171|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK315118|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3	0.0	
chr12	10484576	10484706	reg1002818.p2	4.090	+	NM_002262 NM_007334 AF498040 AF498041 AY327501 U30610 BC028009 AB009597 AJ000001	-24109	+	AK291506 AY227806 NM_001114396	-27595	+	AF287012 TSC_hg19_v1_chr12_+_10365506 AF087847 AK303581 AK315418 AK074195 BC028315 NM_031412 BC009309 AL136676 BX648781 BC008891	-119165	+	BC039836 AK226161 AK292059 NM_007360	57993	-	TSC_hg19_v1_chr12_-_10562143 AK292020 AK310717 AB590270 AF350018 AF350019 CU676066 DQ891978 DQ895169 BC017784 U96845 AJ001683 NM_013431	77607	-	AF461811 NM_001199805	78103	-	NM_002262|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_007334|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AF498040|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AF498041|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AY327501|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##U30610|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##BC028009|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AB009597|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AJ000001|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AK291506|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AY227806|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_001114396|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AF287012|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AF087847|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK303581|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK315418|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK074195|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC028315|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##NM_031412|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC009309|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AL136676|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BX648781|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC008891|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC039836|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AK226161|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AK292059|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##NM_007360|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AK292020|KLRC4-KLRK1|100528032|KLRC4-KLRK1 readthrough##AK310717|KLRC4-KLRK1|100528032|KLRC4-KLRK1 readthrough##AF350018|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##AF350019|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##DQ891978|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##DQ895169|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##BC017784|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##U96845|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##AJ001683|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##NM_013431|KLRC4|8302|killer cell lectin-like receptor subfamily C, member 4##AF461811|KLRC4-KLRK1|100528032|KLRC4-KLRK1 readthrough##NM_001199805|KLRC4-KLRK1|100528032|KLRC4-KLRK1 readthrough	0.0	
chr12	46139800	46139930	reg1031699.p1	4.090	+	TSC_hg19_v1_chr12_+_46123498 AB527360 AY727870 DQ096628 NM_152641 CR749833	-16268	+	TSC_hg19_v1_chr12_+_46123488 AK127872	-16382	+	TSC_hg19_v1_chr12_-_46121531 BC047417	-18335	-	AB463286 TSC_hg19_v1_chr12_-_46357972	218095	-	BC017851 TSC_hg19_v1_chr12_-_46384277	244388	-	TSC_hg19_v1_chr12_-_46384319 AK302999	244460	-	AY727870|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##DQ096628|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##NM_152641|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##CR749833|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##AK127872|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##BC047417|LOC400027|400027|uncharacterized LOC400027##BC017851|SCAF11|9169|SR-related CTD-associated factor 11##AK302999|SCAF11|9169|SR-related CTD-associated factor 11	0.232241	CTCF.p2:-18:0.232
chr15	85197576	85197757	reg1012999.p1	4.090	+	TSC_hg19_v1_chr15_-_85197515 AK225068 NM_032856 BC050648 BC063392	-140	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	-160	-	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	-194	-	M21551 AL110112 BC008603 TSC_hg19_v1_chr15_-_85201431	3780	-	BC007407 BC007431 NM_021077 NM_205858	4131	-	AF090315 AF108945 CR457127 DQ891826 AF087906 AK300693 TSC_hg19_v1_chr15_-_85259371 AK223224 BC000359 AF061737	61680	-	AK225068|WDR73|84942|WD repeat domain 73##NM_032856|WDR73|84942|WD repeat domain 73##BC050648|WDR73|84942|WD repeat domain 73##BC063392|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##M21551|NMB|4828|neuromedin B##AL110112|NMB|4828|neuromedin B##BC008603|NMB|4828|neuromedin B##BC007407|NMB|4828|neuromedin B##BC007431|NMB|4828|neuromedin B##NM_021077|NMB|4828|neuromedin B##NM_205858|NMB|4828|neuromedin B##AF090315|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##AF108945|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##CR457127|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##DQ891826|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##AF087906|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##AK300693|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##AK223224|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##BC000359|SEC11A|23478|SEC11 homolog A (S. cerevisiae)##AF061737|SEC11A|23478|SEC11 homolog A (S. cerevisiae)	0.0	
chr17	76555933	76556015	reg1030351.p1	4.090	+	TSC_hg19_v1_chr17_+_76374729 AK316147 AK307874 AK296882 AK024529 AK225030 AK316405 BC108732 NM_024419 BC035662 AK297156 BC008903 BC015570 BC025951	-181244	+	TSC_hg19_v1_chr17_-_76356159 AK309756 AK314212 BC060858 NM_003955	-199817	-	BC042066 NM_001204210 NM_001204211 NM_001204212 BC148207	-328511	+	NM_173628	17501	-	AK316277 TSC_hg19_v1_chr17_-_76719649	163673	-	TSC_hg19_v1_chr17_-_76719676 AK293894	163777	-	AK316147|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK307874|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK296882|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK024529|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK225030|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK316405|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC108732|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_024419|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC035662|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK297156|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC008903|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC015570|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC025951|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK309756|SOCS3|9021|suppressor of cytokine signaling 3##AK314212|SOCS3|9021|suppressor of cytokine signaling 3##BC060858|SOCS3|9021|suppressor of cytokine signaling 3##NM_003955|SOCS3|9021|suppressor of cytokine signaling 3##BC042066|TMEM235|283999|transmembrane protein 235##NM_001204210|TMEM235|283999|transmembrane protein 235##NM_001204211|TMEM235|283999|transmembrane protein 235##NM_001204212|TMEM235|283999|transmembrane protein 235##BC148207|TMEM235|283999|transmembrane protein 235##NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17##AK316277|CYTH1|9267|cytohesin 1##AK293894|CYTH1|9267|cytohesin 1	0.0	
chr20	1783354	1783440	reg1008657.p2	4.090	+	AY748247 AY748248 CU687894 BC064532 BC020629 AK292745 NM_001039508 NM_018556 NM_080816	-145006	-	AB590891 CU692960 BC131747 Y10376 BC025286 BC075835 TSC_hg19_v1_chr20_-_1600656 AK289866 AK313517 BX537992 NM_001083910 NM_001135844 NM_006065	-182759	-	DQ891297 EU176577 BC033502 NM_178460	-245075	-	TSC_hg19_v1_chr20_+_1874780 NM_001040022	91399	+	TSC_hg19_v1_chr20_+_1874954 BC075849 AK290776	91592	+	TSC_hg19_v1_chr20_+_1875136 AK298243	91737	+	AY748247|SIRPG|55423|signal-regulatory protein gamma##AY748248|SIRPG|55423|signal-regulatory protein gamma##BC064532|SIRPG|55423|signal-regulatory protein gamma##BC020629|SIRPG|55423|signal-regulatory protein gamma##AK292745|SIRPG|55423|signal-regulatory protein gamma##NM_001039508|SIRPG|55423|signal-regulatory protein gamma##NM_018556|SIRPG|55423|signal-regulatory protein gamma##NM_080816|SIRPG|55423|signal-regulatory protein gamma##BC131747|SIRPB1|10326|signal-regulatory protein beta 1##Y10376|SIRPB1|10326|signal-regulatory protein beta 1##BC025286|SIRPB1|10326|signal-regulatory protein beta 1##BC075835|SIRPB1|10326|signal-regulatory protein beta 1##AK289866|SIRPB1|10326|signal-regulatory protein beta 1##BX537992|SIRPB1|10326|signal-regulatory protein beta 1##NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1##NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1##NM_006065|SIRPB1|10326|signal-regulatory protein beta 1##DQ891297|SIRPD|128646|signal-regulatory protein delta##EU176577|SIRPD|128646|signal-regulatory protein delta##BC033502|SIRPD|128646|signal-regulatory protein delta##NM_178460|SIRPD|128646|signal-regulatory protein delta##NM_001040022|SIRPA|140885|signal-regulatory protein alpha##BC075849|SIRPA|140885|signal-regulatory protein alpha##AK290776|SIRPA|140885|signal-regulatory protein alpha##AK298243|SIRPA|140885|signal-regulatory protein alpha	0.0	
chr2	152664971	152665102	reg1032483.p2	4.090	+	TSC_hg19_v1_chr2_-_152590990 AK096903 AK307607 BC029384 BC012533 BC056251 BC105590 NM_001164507 NM_001164508 NM_004543	-74045	-	AY727912 NM_001177665 TSC_hg19_v1_chr2_+_152266674	-398398	+	TSC_hg19_v1_chr2_+_152266419 AY727910 AY727913 NM_001177663 NM_018151 AY727911 NM_001177664 AK299572 AK299291 BX648324 AY585745 CR933663	-398606	+	AB528315 AF493891 BT009829 DQ891193 DQ894376 TSC_hg19_v1_chr2_-_152684707 AF100740	19685	-	TSC_hg19_v1_chr2_-_152684901 AK292714 BC001254	19867	-	TSC_hg19_v1_chr2_-_152684936 AF087889 AK298937	19910	-	AK096903|NEB|4703|nebulin##AK307607|NEB|4703|nebulin##BC029384|NEB|4703|nebulin##BC012533|NEB|4703|nebulin##BC056251|NEB|4703|nebulin##BC105590|NEB|4703|nebulin##NM_001164507|NEB|4703|nebulin##NM_001164508|NEB|4703|nebulin##NM_004543|NEB|4703|nebulin##AY727912|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177665|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727910|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727913|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_018151|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727911|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177664|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299572|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299291|RIF1|55183|RAP1 interacting factor homolog (yeast)##BX648324|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY585745|RIF1|55183|RAP1 interacting factor homolog (yeast)##CR933663|RIF1|55183|RAP1 interacting factor homolog (yeast)##AF493891|ARL5A|26225|ADP-ribosylation factor-like 5A##BT009829|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ891193|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ894376|ARL5A|26225|ADP-ribosylation factor-like 5A##AF100740|ARL5A|26225|ADP-ribosylation factor-like 5A##AK292714|ARL5A|26225|ADP-ribosylation factor-like 5A##BC001254|ARL5A|26225|ADP-ribosylation factor-like 5A##AF087889|ARL5A|26225|ADP-ribosylation factor-like 5A##AK298937|ARL5A|26225|ADP-ribosylation factor-like 5A	0.983158	CTCF.p2:-15:0.983
chr3	127465603	127465675	reg1031812.p2	4.090	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-73822	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-117607	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-148355	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	75791	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	76503	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	168679	+	NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.0	
chr4	185427891	185428023	reg1031433.p1	4.090	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	-32276	-	BC035035 AY358676 AK057370 NM_153343	-288892	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-600046	+	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	142644	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	142876	+	TSC_hg19_v1_chr4_+_185570923 BC064600 AK307317	142972	+	X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111##BC064600|CCDC111|201973|coiled-coil domain containing 111##AK307317|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr5	133315678	133315786	reg1033959.p1	4.090	+	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	-11357	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	-367494	-	TSC_hg19_v1_chr5_-_132948202 AK055684	-367533	-	TSC_hg19_v1_chr5_-_133340377 BC008482	24635	-	TSC_hg19_v1_chr5_-_133340386 BC090042	24651	-	TSC_hg19_v1_chr5_-_133340397 BC071168 AK293639	24669	-	DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##AK055684|FSTL4|23105|follistatin-like 4##BC008482|VDAC1|7416|voltage-dependent anion channel 1##BC090042|VDAC1|7416|voltage-dependent anion channel 1##BC071168|VDAC1|7416|voltage-dependent anion channel 1##AK293639|VDAC1|7416|voltage-dependent anion channel 1	0.979518	CTCF.p2:6:0.980
chr9	14353268	14353449	reg1000620.p2	4.090	+	TSC_hg19_v1_chr9_-_14314141 BX648845 NM_001190737 NM_005596	-39268	-	TSC_hg19_v1_chr9_-_14313945 U70862	-39406	-	TSC_hg19_v1_chr9_-_14313900 AK299605	-39455	-	AK131233 NM_001190738	45623	-	AF161360 TSC_hg19_v1_chr9_-_14693311 AK292960	339962	-	TSC_hg19_v1_chr9_-_14693475 BC042558 NM_178566	340111	-	BX648845|NFIB|4781|nuclear factor I/B##NM_001190737|NFIB|4781|nuclear factor I/B##NM_005596|NFIB|4781|nuclear factor I/B##U70862|NFIB|4781|nuclear factor I/B##AK299605|NFIB|4781|nuclear factor I/B##AK131233|NFIB|4781|nuclear factor I/B##NM_001190738|NFIB|4781|nuclear factor I/B##AF161360|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AK292960|ZDHHC21|340481|zinc finger, DHHC-type containing 21##BC042558|ZDHHC21|340481|zinc finger, DHHC-type containing 21##NM_178566|ZDHHC21|340481|zinc finger, DHHC-type containing 21	0.0	
chr9	96075004	96075163	reg1036565.p1	4.090	+	AJ242724 NM_006648 AB051547 AB463351	-127851	+	BT007164 CU690562 U72661 U91512 BC019336 BC004440 BC000298 TSC_hg19_v1_chr9_-_95896534 BC048212 NM_004148	-178541	-	BC091476 TSC_hg19_v1_chr9_+_95858566	-216504	+	NM_001098808 TSC_hg19_v1_chr9_-_96108726	33627	-	BC080634 TSC_hg19_v1_chr9_-_96213799 BC037551 BC063650 BC038803	138705	-	BC046183 TSC_hg19_v1_chr9_-_96213849	138764	-	AJ242724|WNK2|65268|WNK lysine deficient protein kinase 2##NM_006648|WNK2|65268|WNK lysine deficient protein kinase 2##AB051547|WNK2|65268|WNK lysine deficient protein kinase 2##BT007164|NINJ1|4814|ninjurin 1##U72661|NINJ1|4814|ninjurin 1##U91512|NINJ1|4814|ninjurin 1##BC019336|NINJ1|4814|ninjurin 1##BC004440|NINJ1|4814|ninjurin 1##BC000298|NINJ1|4814|ninjurin 1##BC048212|NINJ1|4814|ninjurin 1##NM_004148|NINJ1|4814|ninjurin 1##BC091476|C9orf89|84270|chromosome 9 open reading frame 89##NM_001098808|C9orf129|445577|chromosome 9 open reading frame 129##BC080634|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC037551|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC063650|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC038803|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC046183|FAM120AOS|158293|family with sequence similarity 120A opposite strand	0.06866	
chrX	152875411	152875522	reg1034070.p2	4.090	+	TSC_hg19_v1_chrX_-_152864639 NM_001130997 NM_152274	-10831	-	BC071851 AB528134 TSC_hg19_v1_chrX_-_152864584 BC001909 BC007232 BC032121	-10956	-	NM_001001344 NM_021949 U57971 U60414 BC130009	-73854	+	TSC_hg19_v1_chrX_+_152907894 AK314250 NM_001395 Y08302	32473	+	TSC_hg19_v1_chrX_+_152908821 BC034936 BC042166	33409	+	TSC_hg19_v1_chrX_+_152912656 BC060837	37274	+	NM_001130997|FAM58A|92002|family with sequence similarity 58, member A##NM_152274|FAM58A|92002|family with sequence similarity 58, member A##BC071851|FAM58A|92002|family with sequence similarity 58, member A##BC001909|FAM58A|92002|family with sequence similarity 58, member A##BC007232|FAM58A|92002|family with sequence similarity 58, member A##BC032121|FAM58A|92002|family with sequence similarity 58, member A##NM_001001344|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##NM_021949|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##U57971|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##U60414|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##BC130009|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##AK314250|DUSP9|1852|dual specificity phosphatase 9##NM_001395|DUSP9|1852|dual specificity phosphatase 9##Y08302|DUSP9|1852|dual specificity phosphatase 9##BC034936|DUSP9|1852|dual specificity phosphatase 9##BC042166|DUSP9|1852|dual specificity phosphatase 9##BC060837|DUSP9|1852|dual specificity phosphatase 9	0.982578	CTCF.p2:0:0.983
chrX	153189635	153189775	reg1033492.p1	4.090	+	NM_000054 NM_001146151 Z11687 AF030626 AF032388 AF101727 AF101728 BC101484 BC112181 AB527584 AY242131	-19142	+	TSC_hg19_v1_chrX_-_153151599 BC021858	-38103	-	NM_000425 NM_001143963 NM_024003 BC126229 BC136447 TSC_hg19_v1_chrX_-_153141452	-48254	-	D50921 AM392626 AM393222 AB384442 TSC_hg19_v1_chrX_-_153191680	1957	-	TSC_hg19_v1_chrX_-_153191700 AY183123 X78817	1988	-	TSC_hg19_v1_chrX_-_153191719 BC052303 NM_001164741 NM_001666	2035	-	NM_000054|AVPR2|554|arginine vasopressin receptor 2##NM_001146151|AVPR2|554|arginine vasopressin receptor 2##Z11687|AVPR2|554|arginine vasopressin receptor 2##AF030626|AVPR2|554|arginine vasopressin receptor 2##AF032388|AVPR2|554|arginine vasopressin receptor 2##AF101727|AVPR2|554|arginine vasopressin receptor 2##AF101728|AVPR2|554|arginine vasopressin receptor 2##BC101484|AVPR2|554|arginine vasopressin receptor 2##BC112181|AVPR2|554|arginine vasopressin receptor 2##AY242131|AVPR2|554|arginine vasopressin receptor 2##NM_000425|L1CAM|3897|L1 cell adhesion molecule##NM_001143963|L1CAM|3897|L1 cell adhesion molecule##NM_024003|L1CAM|3897|L1 cell adhesion molecule##BC126229|L1CAM|3897|L1 cell adhesion molecule##BC136447|L1CAM|3897|L1 cell adhesion molecule##D50921|ARHGAP4|393|Rho GTPase activating protein 4##AM392626|ARHGAP4|393|Rho GTPase activating protein 4##AM393222|ARHGAP4|393|Rho GTPase activating protein 4##AY183123|ARHGAP4|393|Rho GTPase activating protein 4##X78817|ARHGAP4|393|Rho GTPase activating protein 4##BC052303|ARHGAP4|393|Rho GTPase activating protein 4##NM_001164741|ARHGAP4|393|Rho GTPase activating protein 4##NM_001666|ARHGAP4|393|Rho GTPase activating protein 4	0.966743	CTCF.p2:-7:0.967
chrX	15921343	15921524	reg1027827.p1	4.090	+	TSC_hg19_v1_chrX_-_15873104 NM_003916	-48330	-	AK130075 TSC_hg19_v1_chrX_-_15872938	-48495	-	TSC_hg19_v1_chrX_-_15872937 AK296135 AK299921 AK312594	-48504	-	NM_005314	219990	+	L13220 NM_004057 X65869 BC112174	746864	+	AK125332 NM_001144002	808906	-	NM_003916|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK130075|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK296135|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK299921|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##AK312594|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##NM_005314|GRPR|2925|gastrin-releasing peptide receptor##L13220|S100G|795|S100 calcium binding protein G##NM_004057|S100G|795|S100 calcium binding protein G##X65869|S100G|795|S100 calcium binding protein G##BC112174|S100G|795|S100 calcium binding protein G##AK125332|CTPS2|56474|CTP synthase II##NM_001144002|CTPS2|56474|CTP synthase II	0.0	
chr1	171282847	171283028	reg1017109.p1	4.089	+	AK290113 AK315100 M64082 NM_002021 AK296198	-65276	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	-128515	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	-222896	+	BC002780 NM_002022 Z11737	491	+	TSC_hg19_v1_chr1_+_171454689 BC066968 NM_015172 BC058930 BC026108 BC045713 BC001260 BC006090	171757	+	AF253978 AL096857 TSC_hg19_v1_chr1_+_171481269 AF488829	198315	+	AK290113|FMO1|2326|flavin containing monooxygenase 1##AK315100|FMO1|2326|flavin containing monooxygenase 1##M64082|FMO1|2326|flavin containing monooxygenase 1##NM_002021|FMO1|2326|flavin containing monooxygenase 1##AK296198|FMO1|2326|flavin containing monooxygenase 1##NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##BC002780|FMO4|2329|flavin containing monooxygenase 4##NM_002022|FMO4|2329|flavin containing monooxygenase 4##Z11737|FMO4|2329|flavin containing monooxygenase 4##BC066968|PRRC2C|23215|proline-rich coiled-coil 2C##NM_015172|PRRC2C|23215|proline-rich coiled-coil 2C##BC058930|PRRC2C|23215|proline-rich coiled-coil 2C##BC026108|PRRC2C|23215|proline-rich coiled-coil 2C##BC045713|PRRC2C|23215|proline-rich coiled-coil 2C##BC001260|PRRC2C|23215|proline-rich coiled-coil 2C##BC006090|PRRC2C|23215|proline-rich coiled-coil 2C##AF253978|PRRC2C|23215|proline-rich coiled-coil 2C##AL096857|PRRC2C|23215|proline-rich coiled-coil 2C##AF488829|PRRC2C|23215|proline-rich coiled-coil 2C	0.716938	CTCF.p2:-54:0.717
chr1	205497833	205498013	reg1000887.p1	4.089	+	AY353237 AY353240 TSC_hg19_v1_chr1_+_205473802 AY353238 BC011526 AY353239	-24101	+	NM_002596 NM_212502 NM_212503 TSC_hg19_v1_chr1_+_205473688 AK293756 AK296320 AK295654	-24218	+	AB084764 AB084765 AB085610 AB096677 AB096678 AB096679 AB096680 AB096681 AB096682 BC036636 AK302392 NM_001001552 NM_001199050 NM_001199051 NM_001199052	-106727	-	AK293816 NM_181644 TSC_hg19_v1_chr1_+_205538141	40204	+	BC036549 AK091896 AX747240 TSC_hg19_v1_chr1_+_205538184 AK304120 AK090831 AX746641 AK295148	40290	+	BC063676 M85164 M85165 TSC_hg19_v1_chr1_-_205601025 BC040145	102983	-	AY353237|CDK18|5129|cyclin-dependent kinase 18##AY353240|CDK18|5129|cyclin-dependent kinase 18##AY353238|CDK18|5129|cyclin-dependent kinase 18##BC011526|CDK18|5129|cyclin-dependent kinase 18##AY353239|CDK18|5129|cyclin-dependent kinase 18##NM_002596|CDK18|5129|cyclin-dependent kinase 18##NM_212502|CDK18|5129|cyclin-dependent kinase 18##NM_212503|CDK18|5129|cyclin-dependent kinase 18##AK293756|CDK18|5129|cyclin-dependent kinase 18##AK296320|CDK18|5129|cyclin-dependent kinase 18##AK295654|CDK18|5129|cyclin-dependent kinase 18##AB084764|LEMD1|93273|LEM domain containing 1##AB084765|LEMD1|93273|LEM domain containing 1##AB085610|LEMD1|93273|LEM domain containing 1##AB096677|LEMD1|93273|LEM domain containing 1##AB096678|LEMD1|93273|LEM domain containing 1##AB096679|LEMD1|93273|LEM domain containing 1##AB096680|LEMD1|93273|LEM domain containing 1##AB096681|LEMD1|93273|LEM domain containing 1##AB096682|LEMD1|93273|LEM domain containing 1##BC036636|LEMD1|93273|LEM domain containing 1##AK302392|LEMD1|93273|LEM domain containing 1##NM_001001552|LEMD1|93273|LEM domain containing 1##NM_001199050|LEMD1|93273|LEM domain containing 1##NM_001199051|LEMD1|93273|LEM domain containing 1##NM_001199052|LEMD1|93273|LEM domain containing 1##AK293816|MFSD4|148808|major facilitator superfamily domain containing 4##NM_181644|MFSD4|148808|major facilitator superfamily domain containing 4##BC036549|MFSD4|148808|major facilitator superfamily domain containing 4##AK091896|MFSD4|148808|major facilitator superfamily domain containing 4##AK304120|MFSD4|148808|major facilitator superfamily domain containing 4##AK090831|MFSD4|148808|major facilitator superfamily domain containing 4##AK295148|MFSD4|148808|major facilitator superfamily domain containing 4##BC063676|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85164|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85165|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC040145|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)	0.0	
chr17	72642415	72642542	reg1009634.p1	4.089	+	BC100888 BC100889 BC100890 AK298031 AF395839 BX648376 AK303545 NM_181449	-22633	-	EF137868 NM_001115152 AY358148	-54083	-	AK056444 NM_152460	-61422	+	NM_175738 TSC_hg19_v1_chr17_+_72667269 BC040547 AK290202	24789	+	TSC_hg19_v1_chr17_+_72667316 AK054846	24839	+	AF251706 AY303545 AK315165 TSC_hg19_v1_chr17_-_72709081 AK298752 AY358545 AK092757 AX747710 NM_139018 BC028199	66589	-	BC100888|CD300E|342510|CD300e molecule##BC100889|CD300E|342510|CD300e molecule##BC100890|CD300E|342510|CD300e molecule##AK298031|CD300E|342510|CD300e molecule##AF395839|CD300E|342510|CD300e molecule##BX648376|CD300E|342510|CD300e molecule##AK303545|CD300E|342510|CD300e molecule##NM_181449|CD300E|342510|CD300e molecule##EF137868|CD300LD|100131439|CD300 molecule-like family member d##NM_001115152|CD300LD|100131439|CD300 molecule-like family member d##AY358148|CD300LD|100131439|CD300 molecule-like family member d##AK056444|C17orf77|146723|chromosome 17 open reading frame 77##NM_152460|C17orf77|146723|chromosome 17 open reading frame 77##NM_175738|RAB37|326624|RAB37, member RAS oncogene family##BC040547|RAB37|326624|RAB37, member RAS oncogene family##AK290202|RAB37|326624|RAB37, member RAS oncogene family##AK054846|RAB37|326624|RAB37, member RAS oncogene family##AF251706|CD300LF|146722|CD300 molecule-like family member f##AY303545|CD300LF|146722|CD300 molecule-like family member f##AK315165|CD300LF|146722|CD300 molecule-like family member f##AK298752|CD300LF|146722|CD300 molecule-like family member f##AY358545|CD300LF|146722|CD300 molecule-like family member f##AK092757|CD300LF|146722|CD300 molecule-like family member f##NM_139018|CD300LF|146722|CD300 molecule-like family member f##BC028199|CD300LF|146722|CD300 molecule-like family member f	0.0	
chr2	43467533	43467630	reg1025456.p1	4.089	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-13839	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-13851	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-14236	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	355567	-	TSC_hg19_v1_chr2_+_43864411 BC063310	396832	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	396858	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.0	
chr7	1544071	1544251	reg1031700.p2	4.089	+	TSC_hg19_v1_chr7_-_1544019 AK093809 AX748318 NM_001080453	-128	-	TSC_hg19_v1_chr7_-_1499107 AK027124 NM_182924	-45054	-	CU691530 EU832111 EU832205 AK074068 BC037988 TSC_hg19_v1_chr7_-_1499102	-45128	-	TSC_hg19_v1_chr7_+_1570337 AF059194 NM_002360	26183	+	TSC_hg19_v1_chr7_+_1577118 AK092414	32961	+	TSC_hg19_v1_chr7_+_1580027 BC143040 BC143041 BC148194	35868	+	NM_001080453|INTS1|26173|integrator complex subunit 1##AK027124|MICALL2|79778|MICAL-like 2##NM_182924|MICALL2|79778|MICAL-like 2##EU832111|MICALL2|79778|MICAL-like 2##EU832205|MICALL2|79778|MICAL-like 2##AK074068|MICALL2|79778|MICAL-like 2##BC037988|MICALL2|79778|MICAL-like 2##AF059194|MAFK|7975|v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)##NM_002360|MAFK|7975|v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)##AK092414|MAFK|7975|v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)##BC143040|MAFK|7975|v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)##BC143041|MAFK|7975|v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)##BC148194|MAFK|7975|v-maf musculoaponeurotic fibrosarcoma oncogene homolog K (avian)	0.366514	
chr7	46168908	46169061	reg1031201.p1	4.089	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-208178	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-235850	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-240879	+	TSC_hg19_v1_chr7_-_47579207 BC071791	1410225	-	TSC_hg19_v1_chr7_-_47621681 CR749644	1452679	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	1452799	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.0	
chrY	1313733	1313859	reg1031997.p1	4.089	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	-32212	-	NM_000451 NM_006883 U89331	-778718	+	AK293506 NM_013239	-1016107	-	NM_001161529 NM_001161531 NM_001161532 NM_006140 NM_172245 NM_172246 NM_172249 AK293086 AK301395 BC071835 M64445 BC002635 AL833597 AK309630 L29348 L29349 U93096 X17648	23918	+	NM_001161530 NM_172247 M73832 DQ893104 DQ896376 AB590144 CU687176 DQ841258 X54935	37787	+	BC035407 NM_002183	91712	+	AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2##NM_000451|SHOX|6473|short stature homeobox##NM_006883|SHOX|6473|short stature homeobox##U89331|SHOX|6473|short stature homeobox##AK293506|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_013239|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_001161529|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161531|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161532|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_006140|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172245|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172246|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172249|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK293086|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK301395|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC071835|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M64445|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC002635|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AL833597|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK309630|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29348|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29349|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##U93096|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X17648|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161530|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172247|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M73832|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ893104|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ896376|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ841258|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X54935|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC035407|IL3RA|3563|interleukin 3 receptor, alpha (low affinity)##NM_002183|IL3RA|3563|interleukin 3 receptor, alpha (low affinity)	0.828004	CTCF.p2:3:0.828
chr10	30440942	30441059	reg1037155.p2	4.088	+	TSC_hg19_v1_chr10_-_30348516 AK308850 NM_020848 BC071601	-92506	-	TSC_hg19_v1_chr10_-_30316350 BC047548	-124569	-	TSC_hg19_v1_chr10_-_30025865 AK307640	-415094	-	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	197233	-	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	281939	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	282121	+	AK308850|KIAA1462|57608|KIAA1462##NM_020848|KIAA1462|57608|KIAA1462##BC071601|KIAA1462|57608|KIAA1462##BC047548|KIAA1462|57608|KIAA1462##AK307640|SVIL|6840|supervillin##AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8	0.995822	CTCF.p2:2:0.996
chr12	11721858	11721981	reg1031146.p1	4.088	+	BC044827 NM_006248	-173428	-	BC044827 K03205 K03206 BC141917 K03204 NM_005039 NM_199353 NM_199354 AX772842	-213403	-	BC130386 BC035362 K03207 NM_002723 BC128191	-258559	-	TSC_hg19_v1_chr12_+_11802659 AK289441	80754	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	80855	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	81067	+	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2##BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##K03205|PRB1|5542|proline-rich protein BstNI subfamily 1##K03206|PRB1|5542|proline-rich protein BstNI subfamily 1##BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1##K03204|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1##BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4##BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4##K03207|PRB4|5545|proline-rich protein BstNI subfamily 4##NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4##BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4##AK289441|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6	0.0	
chr12	16759180	16759339	reg1031287.p1	4.088	+	AK316021 AK294474 NM_001243612	-388	-	NM_001243611 TSC_hg19_v1_chr12_-_16758338	-934	-	TSC_hg19_v1_chr12_-_16757958 AK294651 AB044745	-1247	-	AK312418 TSC_hg19_v1_chr12_-_16759422	163	-	BC026311 TSC_hg19_v1_chr12_-_16759432	172	-	TSC_hg19_v1_chr12_-_16759535 NM_018640	274	-	AK316021|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294474|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243612|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243611|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044745|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK312418|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC026311|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_018640|LMO3|55885|LIM domain only 3 (rhombotin-like 2)	0.0	
chr12	25108354	25108481	reg1031646.p1	4.088	+	TSC_hg19_v1_chr12_-_25102303 AK056255 NM_001178091 NM_001178092 NM_005504	-6081	-	TSC_hg19_v1_chr12_-_25102021 BX647122 AK128527	-6397	-	TSC_hg19_v1_chr12_-_25101988 AK299088	-6461	-	BC035880 NM_001101339 BC046192 BC062789	41995	-	NM_001204126 NM_001204127 NM_006152	96763	+	TSC_hg19_v1_chr12_+_25205520 BC029391 AK303103 AK303256 BC126417 BC144164 BC144165 BC144170	97163	+	AK056255|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178091|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178092|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_005504|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BX647122|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK128527|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK299088|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BC035880|C12orf77|196415|chromosome 12 open reading frame 77##NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77##BC046192|C12orf77|196415|chromosome 12 open reading frame 77##BC062789|C12orf77|196415|chromosome 12 open reading frame 77##NM_001204126|LRMP|4033|lymphoid-restricted membrane protein##NM_001204127|LRMP|4033|lymphoid-restricted membrane protein##NM_006152|LRMP|4033|lymphoid-restricted membrane protein##BC029391|LRMP|4033|lymphoid-restricted membrane protein##AK303103|LRMP|4033|lymphoid-restricted membrane protein##AK303256|LRMP|4033|lymphoid-restricted membrane protein##BC126417|LRMP|4033|lymphoid-restricted membrane protein##BC144164|LRMP|4033|lymphoid-restricted membrane protein##BC144165|LRMP|4033|lymphoid-restricted membrane protein##BC144170|LRMP|4033|lymphoid-restricted membrane protein	0.0	
chr1	38538820	38538918	reg1032009.p2	4.088	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-26420	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-60439	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-60484	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	786517	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	800147	-	AK312811 BC051675 AK123051 NM_030772	808408	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.0	
chr15	53879149	53879236	reg1032649.p2	4.088	+	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-796998	-	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	-908311	-	TSC_hg19_v1_chr15_-_52861344 BC100015 AL833077	-1017815	-	AK096055 BX537884 NM_182758	172655	-	NM_001080534	425908	+	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	1609900	-	BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##BC100015|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AL833077|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1	0.701357	CTCF.p2:4:0.701
chr15	76351320	76351420	reg1024221.p1	4.088	+	CR749519 AK311507 BC017568 NM_138573	-46597	-	TSC_hg19_v1_chr15_+_76196276 BC020204 NM_012170 NM_147188 AK307084 AK024048 BC041691 AK223500 BC039024 AK294311 BC008762 BC032540 CU692024 AY005144	-155121	+	AK296234 NM_001145335 TSC_hg19_v1_chr15_+_76136384	-214982	+	AK311204 TSC_hg19_v1_chr15_-_76352131	732	-	TSC_hg19_v1_chr15_+_76352281 AK095509 NM_152335	919	+	TSC_hg19_v1_chr15_+_76352323 AK056777 AK308676	959	+	CR749519|NRG4|145957|neuregulin 4##AK311507|NRG4|145957|neuregulin 4##BC017568|NRG4|145957|neuregulin 4##NM_138573|NRG4|145957|neuregulin 4##BC020204|FBXO22|26263|F-box protein 22##NM_012170|FBXO22|26263|F-box protein 22##NM_147188|FBXO22|26263|F-box protein 22##AK307084|FBXO22|26263|F-box protein 22##AK024048|FBXO22|26263|F-box protein 22##BC041691|FBXO22|26263|F-box protein 22##AK223500|FBXO22|26263|F-box protein 22##BC039024|FBXO22|26263|F-box protein 22##AK294311|FBXO22|26263|F-box protein 22##BC032540|FBXO22|26263|F-box protein 22##AY005144|FBXO22|26263|F-box protein 22##AK296234|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##NM_001145335|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK311204|NRG4|145957|neuregulin 4##AK095509|C15orf27|123591|chromosome 15 open reading frame 27##NM_152335|C15orf27|123591|chromosome 15 open reading frame 27##AK308676|C15orf27|123591|chromosome 15 open reading frame 27	0.223965	CTCF.p2:10:0.224
chr2	43710249	43710356	reg1030593.p3	4.088	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-256560	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-256572	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-256957	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	112846	-	TSC_hg19_v1_chr2_+_43864411 BC063310	154111	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	154137	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.0	
chr5	176797842	176797967	reg1037298.p2	4.088	+	TSC_hg19_v1_chr5_+_176794314 AK098150	-3591	+	TSC_hg19_v1_chr5_+_176784947 AB590533	-12919	+	AK123382 NM_006480 TSC_hg19_v1_chr5_+_176784882 BC014094	-13022	+	AK096088 NM_001167579 NM_003052 TSC_hg19_v1_chr5_+_176811434 AK298299 BC053349 BC035294 BC050385 L13258	13538	+	BC132952 BC132954 NM_001029886	29732	-	TSC_hg19_v1_chr5_-_176831183 BT007350	33321	-	AK098150|RGS14|10636|regulator of G-protein signaling 14##AK123382|RGS14|10636|regulator of G-protein signaling 14##NM_006480|RGS14|10636|regulator of G-protein signaling 14##BC014094|RGS14|10636|regulator of G-protein signaling 14##AK096088|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_001167579|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_003052|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK298299|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC053349|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC035294|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC050385|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##L13258|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC132952|PFN3|345456|profilin 3##BC132954|PFN3|345456|profilin 3##NM_001029886|PFN3|345456|profilin 3##BT007350|F12|2161|coagulation factor XII (Hageman factor)	0.035948	
chr7	102082026	102082206	reg1027215.p1	4.088	+	TSC_hg19_v1_chr7_+_102074021 AK056497 AK027639 AK300574	-8075	+	TSC_hg19_v1_chr7_+_102073995 NM_001126340 NM_032831	-8139	+	NM_024653 TSC_hg19_v1_chr7_+_102036839 AK023964 BC014298 DQ893168 DQ896466 AK294664	-45274	+	TSC_hg19_v1_chr7_-_102105305 CU678220 BC002820 BC017096	23117	-	AK000020 TSC_hg19_v1_chr7_-_102105307 AK026097 AK222689 NM_017621	23201	-	TSC_hg19_v1_chr7_+_102105430 AL133057 BC030547 NM_152892 AK290967 AK313771	23292	+	AK056497|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK027639|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK300574|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_001126340|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_032831|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_024653|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK023964|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##BC014298|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ893168|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ896466|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK294664|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##BC002820|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##BC017096|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK000020|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK026097|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK222689|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##NM_017621|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AL133057|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##BC030547|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##NM_152892|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK290967|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK313771|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1	0.0	
chr9	95479021	95479141	reg1010840.p2	4.088	+	TSC_hg19_v1_chr9_-_95432542 BC026154 NM_022755	-46524	-	AF520811 TSC_hg19_v1_chr9_-_95432355 AK023225 AF351202	-46768	-	AB011792 AK303922 AK312820 AK296458 BX537976 NM_001197295 NM_001197296 NM_001393	-180769	-	AB014599 TSC_hg19_v1_chr9_-_95527124 AY052562 NM_001003800 NM_015250 BC073970	48002	-	AK299274 TSC_hg19_v1_chr9_-_95640325 AK091203 AX746846 NM_001007101 AL833202 NM_031486 AK292997 AK309617	161196	-	NM_001083536	230519	+	BC026154|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##NM_022755|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF520811|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AK023225|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF351202|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AB014599|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AY052562|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_001003800|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_015250|BICD2|23299|bicaudal D homolog 2 (Drosophila)##BC073970|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AK299274|ZNF484|83744|zinc finger protein 484##AK091203|ZNF484|83744|zinc finger protein 484##NM_001007101|ZNF484|83744|zinc finger protein 484##AL833202|ZNF484|83744|zinc finger protein 484##NM_031486|ZNF484|83744|zinc finger protein 484##AK292997|ZNF484|83744|zinc finger protein 484##AK309617|ZNF484|83744|zinc finger protein 484##NM_001083536|FGD3|89846|FYVE, RhoGEF and PH domain containing 3	0.117785	
chr10	118281073	118281189	reg1029696.p2	4.087	+	AL833418 BC117224 NM_001011709 HQ258260	-93679	+	BC044830 NM_198515	-197192	+	AF038421 NM_005264 TSC_hg19_v1_chr10_-_118033147	-248063	-	NM_000936 AK313941 J05125 BC007025 BC014309 CU676961 M93285	24384	+	BC005233 CR749596 CR749299 CR749524 M93283 NM_006229 AK307063 AK130236 BC025784 CU675059	69424	+	TSC_hg19_v1_chr10_+_118380464 AK291492 AK307745 AK308508 AK308511 AK308521 NM_005396	99328	+	AL833418|PNLIPRP3|119548|pancreatic lipase-related protein 3##BC117224|PNLIPRP3|119548|pancreatic lipase-related protein 3##NM_001011709|PNLIPRP3|119548|pancreatic lipase-related protein 3##HQ258260|PNLIPRP3|119548|pancreatic lipase-related protein 3##BC044830|C10orf96|374355|chromosome 10 open reading frame 96##NM_198515|C10orf96|374355|chromosome 10 open reading frame 96##AF038421|GFRA1|2674|GDNF family receptor alpha 1##NM_005264|GFRA1|2674|GDNF family receptor alpha 1##NM_000936|PNLIP|5406|pancreatic lipase##AK313941|PNLIP|5406|pancreatic lipase##J05125|PNLIP|5406|pancreatic lipase##BC007025|PNLIP|5406|pancreatic lipase##BC014309|PNLIP|5406|pancreatic lipase##M93285|PNLIP|5406|pancreatic lipase##BC005233|PNLIPRP1|5407|pancreatic lipase-related protein 1##CR749596|PNLIPRP1|5407|pancreatic lipase-related protein 1##CR749299|PNLIPRP1|5407|pancreatic lipase-related protein 1##CR749524|PNLIPRP1|5407|pancreatic lipase-related protein 1##M93283|PNLIPRP1|5407|pancreatic lipase-related protein 1##NM_006229|PNLIPRP1|5407|pancreatic lipase-related protein 1##AK307063|PNLIPRP1|5407|pancreatic lipase-related protein 1##AK130236|PNLIPRP1|5407|pancreatic lipase-related protein 1##BC025784|PNLIPRP1|5407|pancreatic lipase-related protein 1##AK291492|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK307745|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308508|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308511|PNLIPRP2|5408|pancreatic lipase-related protein 2##AK308521|PNLIPRP2|5408|pancreatic lipase-related protein 2##NM_005396|PNLIPRP2|5408|pancreatic lipase-related protein 2	0.28223	CTCF.p2:-5:0.282
chr1	226548156	226548295	reg1031209.p1	4.087	+	TSC_hg19_v1_chr1_-_226497442 AY166859 BC065302 AY166858	-50733	-	BC045625 NM_173083	-51028	-	TSC_hg19_v1_chr1_-_226496839 AY786184 BC043444 BX537869 AK126177 AF190323 AF190324 AK308823	-51329	-	TSC_hg19_v1_chr1_-_226595655 DQ891636 DQ894826 BC021045	47381	-	TSC_hg19_v1_chr1_-_226595717 AK312339 J03473	47480	-	TSC_hg19_v1_chr1_-_226595759 M18112 BC018620 AK225654	47530	-	AY166859|LIN9|286826|lin-9 homolog (C. elegans)##BC065302|LIN9|286826|lin-9 homolog (C. elegans)##AY166858|LIN9|286826|lin-9 homolog (C. elegans)##BC045625|LIN9|286826|lin-9 homolog (C. elegans)##NM_173083|LIN9|286826|lin-9 homolog (C. elegans)##AY786184|LIN9|286826|lin-9 homolog (C. elegans)##BC043444|LIN9|286826|lin-9 homolog (C. elegans)##BX537869|LIN9|286826|lin-9 homolog (C. elegans)##AK126177|LIN9|286826|lin-9 homolog (C. elegans)##AF190323|LIN9|286826|lin-9 homolog (C. elegans)##AF190324|LIN9|286826|lin-9 homolog (C. elegans)##AK308823|LIN9|286826|lin-9 homolog (C. elegans)##DQ891636|PARP1|142|poly (ADP-ribose) polymerase 1##DQ894826|PARP1|142|poly (ADP-ribose) polymerase 1##BC021045|PARP1|142|poly (ADP-ribose) polymerase 1##AK312339|PARP1|142|poly (ADP-ribose) polymerase 1##J03473|PARP1|142|poly (ADP-ribose) polymerase 1##M18112|PARP1|142|poly (ADP-ribose) polymerase 1##BC018620|PARP1|142|poly (ADP-ribose) polymerase 1##AK225654|PARP1|142|poly (ADP-ribose) polymerase 1	0.027789	
chr12	59766913	59767010	reg1030372.p1	4.087	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-452659	-	AY505340 BC126169 BC126171 BC143960 AY358288 NM_153377 TSC_hg19_v1_chr12_-_59314272	-452784	-	AK301162 AY358295 NM_001136051	-453646	-	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	222956	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	316178	+	BC050347 NM_178539	2819622	-	AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2	0.727209	CTCF.p2:-6:0.727
chr14	72025644	72025745	reg1028970.p2	4.087	+	AF090989 AF090990 NM_015556	-29653	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-651243	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-651561	+	AK294895 NM_001204423	373122	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	373459	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	374172	+	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6	0.030623	
chr16	15982372	15982553	reg1034331.p1	4.087	+	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	-9	-	BC101677 BC104906 BC143364 AB020673 AY520816 AY520817 TSC_hg19_v1_chr16_-_15950886 AK308389 BC031040 EU489063 NM_001040113 NM_001040114 NM_002474 NM_022844	-31593	-	TSC_hg19_v1_chr16_-_15835382 D10667	-147015	-	AL832498 TSC_hg19_v1_chr16_-_15982471	23	-	TSC_hg19_v1_chr16_+_16043442 L05628 NM_004996 NM_019862 NM_019898 NM_019899 NM_019900 X78338	60902	+	TSC_hg19_v1_chr16_+_16146613 HQ917065	164156	+	AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##BC101677|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC104906|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC143364|MYH11|4629|myosin, heavy chain 11, smooth muscle##AB020673|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520816|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520817|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK308389|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC031040|MYH11|4629|myosin, heavy chain 11, smooth muscle##EU489063|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040113|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040114|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_002474|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_022844|MYH11|4629|myosin, heavy chain 11, smooth muscle##D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle##AL832498|FOPNL|123811|FGFR1OP N-terminal like##L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1	0.029099	
chr16	21434598	21434740	reg1037417.p2	4.087	+	BX648477 NM_001014444 NM_001888	-120282	-	BC018061 AK290852 TSC_hg19_v1_chr16_-_21289660	-145021	-	CU676152 DQ892377 DQ895591 AK310424 U85772 L02950 TSC_hg19_v1_chr16_-_21289612 BC008398	-145076	-	BC036263 NM_130464	1988	-	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	97083	-	TSC_hg19_v1_chr16_+_21610912 NM_001077180 NM_016025 AJ278577 AJ278578 AK074529 BC000195 AK313077 AK075022 AK075237	176221	+	BX648477|CRYM|1428|crystallin, mu##NM_001014444|CRYM|1428|crystallin, mu##NM_001888|CRYM|1428|crystallin, mu##BC018061|CRYM|1428|crystallin, mu##AK290852|CRYM|1428|crystallin, mu##DQ892377|CRYM|1428|crystallin, mu##DQ895591|CRYM|1428|crystallin, mu##AK310424|CRYM|1428|crystallin, mu##U85772|CRYM|1428|crystallin, mu##L02950|CRYM|1428|crystallin, mu##BC008398|CRYM|1428|crystallin, mu##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2##NM_001077180|METTL9|51108|methyltransferase like 9##NM_016025|METTL9|51108|methyltransferase like 9##AJ278577|METTL9|51108|methyltransferase like 9##AJ278578|METTL9|51108|methyltransferase like 9##AK074529|METTL9|51108|methyltransferase like 9##BC000195|METTL9|51108|methyltransferase like 9##AK313077|METTL9|51108|methyltransferase like 9##AK075022|METTL9|51108|methyltransferase like 9##AK075237|METTL9|51108|methyltransferase like 9	0.0	
chr20	52489353	52489514	reg1028037.p1	4.087	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-278634	-	AF041259 NM_006526	-289798	-	AK302570 NM_001193421	-687612	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	197629	-	AK315220 NM_003657	197870	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	301087	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr3	127889863	127890032	reg1037238.p2	4.087	+	TSC_hg19_v1_chr3_+_127872325 BC007933 AF268872	-17509	+	TSC_hg19_v1_chr3_+_127872314 NM_021937	-17638	+	AB451224 AB451347 AB590226 BT007057 DQ469310 DQ891448 DQ894627 BC012886 TSC_hg19_v1_chr3_-_127842656 AB012122 AF099084 BC000519 BC002993 AF070735 AJ010058 AK222575 Y18418 AK222563 AK312290 NM_003707	-47324	-	BC050288 NM_153330	296143	-	TSC_hg19_v1_chr3_+_128199744 CU677364 CU678039	309856	+	M77810 BC015577 BC018988 BC051272 NM_001145662 M68891 TSC_hg19_v1_chr3_-_128206775	316792	-	BC007933|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AF268872|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##NM_021937|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AB451224|RUVBL1|8607|RuvB-like 1 (E. coli)##AB451347|RUVBL1|8607|RuvB-like 1 (E. coli)##BT007057|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ469310|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ891448|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ894627|RUVBL1|8607|RuvB-like 1 (E. coli)##BC012886|RUVBL1|8607|RuvB-like 1 (E. coli)##AB012122|RUVBL1|8607|RuvB-like 1 (E. coli)##AF099084|RUVBL1|8607|RuvB-like 1 (E. coli)##BC002993|RUVBL1|8607|RuvB-like 1 (E. coli)##AF070735|RUVBL1|8607|RuvB-like 1 (E. coli)##AJ010058|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222575|RUVBL1|8607|RuvB-like 1 (E. coli)##Y18418|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222563|RUVBL1|8607|RuvB-like 1 (E. coli)##AK312290|RUVBL1|8607|RuvB-like 1 (E. coli)##NM_003707|RUVBL1|8607|RuvB-like 1 (E. coli)##BC050288|DNAJB8|165721|DnaJ (Hsp40) homolog, subfamily B, member 8##NM_153330|DNAJB8|165721|DnaJ (Hsp40) homolog, subfamily B, member 8##M77810|GATA2|2624|GATA binding protein 2##BC015577|GATA2|2624|GATA binding protein 2##BC018988|GATA2|2624|GATA binding protein 2##BC051272|GATA2|2624|GATA binding protein 2##NM_001145662|GATA2|2624|GATA binding protein 2##M68891|GATA2|2624|GATA binding protein 2	0.664207	CTCF.p2:16:0.664
chr7	133756150	133756331	reg1037946.p1	4.087	+	TSC_hg19_v1_chr7_+_132937838 NM_001037126 NM_021807 AF380839 AK027688 AL831989 AK298191 BC067263 BC026174 CU693148 AB051486	-818391	+	TSC_hg19_v1_chr7_-_132766851 BC011596 BC014839 AK129533	-989394	-	AB528286 TSC_hg19_v1_chr7_-_132766813 AK294071 AK000427 NM_017812 AK310236	-989476	-	BC104897 BC104899 AK057348 NM_144648	55837	+	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	245383	-	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	245547	-	NM_001037126|EXOC4|60412|exocyst complex component 4##NM_021807|EXOC4|60412|exocyst complex component 4##AF380839|EXOC4|60412|exocyst complex component 4##AK027688|EXOC4|60412|exocyst complex component 4##AL831989|EXOC4|60412|exocyst complex component 4##AK298191|EXOC4|60412|exocyst complex component 4##BC067263|EXOC4|60412|exocyst complex component 4##BC026174|EXOC4|60412|exocyst complex component 4##AB051486|EXOC4|60412|exocyst complex component 4##BC011596|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC014839|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK129533|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK294071|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK000427|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##NM_017812|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK310236|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4	0.0	
chr10	119416389	119416518	reg1032193.p1	4.086	+	TSC_hg19_v1_chr10_+_119302713 AB463605	-113710	+	AF301598 NM_001165924 NM_004098	-114498	+	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	-114537	-	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	389591	-	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	389977	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	685371	-	AF301598|EMX2|2018|empty spiracles homeobox 2##NM_001165924|EMX2|2018|empty spiracles homeobox 2##NM_004098|EMX2|2018|empty spiracles homeobox 2##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A	0.0	
chr10	31673226	31673407	reg1036016.p1	4.086	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-63227	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-65183	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-65359	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	544408	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	544469	-	TSC_hg19_v1_chr10_-_32344938 AB462413	671616	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.0	
chr1	248611801	248611880	reg1046021.p1	4.086	+	AB463961 NM_030904	-42545	+	NM_001005471	-60931	+	NM_001004696	-86958	+	BC136961 BC136962 NM_001004136	4247	+	BC136915 BC136916 NM_001005495	24798	+	BC140915 BC140747 NM_001004697	40036	+	NM_030904|OR2T1|26696|olfactory receptor, family 2, subfamily T, member 1##NM_001005471|OR2T6|254879|olfactory receptor, family 2, subfamily T, member 6##NM_001004696|OR2T4|127074|olfactory receptor, family 2, subfamily T, member 4##BC136961|OR2T2|401992|olfactory receptor, family 2, subfamily T, member 2##BC136962|OR2T2|401992|olfactory receptor, family 2, subfamily T, member 2##NM_001004136|OR2T2|401992|olfactory receptor, family 2, subfamily T, member 2##BC136915|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3##BC136916|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3##NM_001005495|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3##BC140915|OR2T5|401993|olfactory receptor, family 2, subfamily T, member 5##BC140747|OR2T5|401993|olfactory receptor, family 2, subfamily T, member 5##NM_001004697|OR2T5|401993|olfactory receptor, family 2, subfamily T, member 5	0.0	
chr16	29117949	29118035	reg1033459.p2	4.086	+	TSC_hg19_v1_chr16_+_29086310 BC042920 AK225670 AK298442 AK301253	-31687	+	AK307342 NM_001014987 NM_001014988 NM_014387 TSC_hg19_v1_chr16_+_28996403 AJ223280	-121594	+	BC011563 NM_001014989	-121846	+	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	347859	+	BC022832 NM_001031827 NM_001039182	348292	-	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	353234	+	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK307342|LAT|27040|linker for activation of T cells##NM_001014987|LAT|27040|linker for activation of T cells##NM_001014988|LAT|27040|linker for activation of T cells##NM_014387|LAT|27040|linker for activation of T cells##AJ223280|LAT|27040|linker for activation of T cells##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3	0.0	
chr1	93004158	93004339	reg1032485.p2	4.086	+	U67369 NM_005263 TSC_hg19_v1_chr1_-_92952458	-51798	-	BC032751 TSC_hg19_v1_chr1_-_92951630 NM_001127216	-52633	-	TSC_hg19_v1_chr1_-_92949508 AK123009	-54716	-	AB449875 AB587441 AF008915 AF042345 NM_005665	253707	-	TSC_hg19_v1_chr1_+_93297596 NM_000969 AK092963 AK095815 AK314720 AB055762	293316	+	TSC_hg19_v1_chr1_+_93297612 BC109370	293357	+	U67369|GFI1|2672|growth factor independent 1 transcription repressor##NM_005263|GFI1|2672|growth factor independent 1 transcription repressor##BC032751|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127216|GFI1|2672|growth factor independent 1 transcription repressor##AK123009|GFI1|2672|growth factor independent 1 transcription repressor##AB449875|EVI5|7813|ecotropic viral integration site 5##AF008915|EVI5|7813|ecotropic viral integration site 5##NM_005665|EVI5|7813|ecotropic viral integration site 5##NM_000969|RPL5|6125|ribosomal protein L5##AK092963|RPL5|6125|ribosomal protein L5##AK095815|RPL5|6125|ribosomal protein L5##AK314720|RPL5|6125|ribosomal protein L5##AB055762|RPL5|6125|ribosomal protein L5##BC109370|RPL5|6125|ribosomal protein L5	0.0	
chr10	8408195	8408309	reg1034225.p1	4.085	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-310769	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-311477	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-311603	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	2639005	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	2639033	+	AK299548 TSC_hg19_v1_chr10_+_11047339	2639088	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.0	
chr10	92980547	92980659	reg1024302.p2	4.085	+	TSC_hg19_v1_chr10_+_92980539 AL832496	-69	+	TSC_hg19_v1_chr10_+_92980445 NM_032373	-195	+	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	-57841	+	BC071762 TSC_hg19_v1_chr10_+_93170064	189455	+	TSC_hg19_v1_chr10_+_93170100 NM_173497 NM_182765 AK295723 AK094625 BC040187 EU832472 EU832551 BX537856	189578	+	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	412158	-	AL832496|PCGF5|84333|polycomb group ring finger 5##NM_032373|PCGF5|84333|polycomb group ring finger 5##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5##NM_173497|HECTD2|143279|HECT domain containing 2##NM_182765|HECTD2|143279|HECT domain containing 2##AK295723|HECTD2|143279|HECT domain containing 2##AK094625|HECTD2|143279|HECT domain containing 2##BC040187|HECTD2|143279|HECT domain containing 2##EU832472|HECTD2|143279|HECT domain containing 2##EU832551|HECTD2|143279|HECT domain containing 2##BX537856|HECTD2|143279|HECT domain containing 2##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C	0.0	
chr1	160825333	160825441	reg1028173.p1	4.085	+	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	-59389	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-116323	+	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	-143801	-	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	7191	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	29571	-	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	99172	-	NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2	0.0	
chr1	181906524	181906636	reg1009532.p2	4.085	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-453880	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-848715	+	NM_016545	-848943	+	BC137223 BC137224 AK128654 NM_001009992	124217	-	TSC_hg19_v1_chr1_-_182354649 AK301600	448102	-	TSC_hg19_v1_chr1_-_182357758 BC127883	451183	-	NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase	0.011628	
chr12	124978703	124978883	reg1022135.p3	4.085	+	AK126577 NM_181709	-205084	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-521064	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-521594	-	TSC_hg19_v1_chr12_-_125002875 BC033087	24066	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	73282	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	369512	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.597803	CTCF.p2:85:0.478
chr12	4228260	4228441	reg1026226.p1	4.085	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-245850	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-365968	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-366082	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	154694	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	202041	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	260450	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.0	
chr13	113422569	113422645	reg1032669.p2	4.085	+	TSC_hg19_v1_chr13_+_113344493 NM_015205 NM_032189	-78028	+	TSC_hg19_v1_chr13_-_113344130 AK057085	-78501	-	AK129953 NM_207440	-121250	+	TSC_hg19_v1_chr13_+_113622764 AB002360	200178	+	TSC_hg19_v1_chr13_+_113623680 AK315969 NM_001112732 AK295670	200988	+	TSC_hg19_v1_chr13_+_113633625 AK307867	211032	+	NM_015205|ATP11A|23250|ATPase, class VI, type 11A##NM_032189|ATP11A|23250|ATPase, class VI, type 11A##AK057085|LOC440149|440149|uncharacterized LOC440149##AK129953|C13orf35|400165|chromosome 13 open reading frame 35##NM_207440|C13orf35|400165|chromosome 13 open reading frame 35##AB002360|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK315969|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##NM_001112732|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK295670|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK307867|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	0.0	
chr15	48503597	48503688	reg1030992.p2	4.085	+	NM_000338 NM_001184832 AK129998 AK298312 BC020860	-5145	+	BX537772 NM_001145668 AK295375	-19729	+	TSC_hg19_v1_chr15_-_48470503 AB037762 BC152420 BC152451 BC068523 AK023133 NM_016132	-33125	-	TSC_hg19_v1_chr15_+_48623625 NM_001025248 NM_001025249 AK000629 BC070339 BC110377 AK298464 U90223 AB528727	120022	+	TSC_hg19_v1_chr15_+_48624363 AK291515 NM_001948 AK312122 U31930 U62891 L11877 AB049113 M89913 DQ891191 DQ894375 CR541720 CR541781	120759	+	TSC_hg19_v1_chr15_-_48937070 L13923	433441	-	NM_000338|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##NM_001184832|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK129998|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AK298312|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##BX537772|CTXN2|399697|cortexin 2##NM_001145668|CTXN2|399697|cortexin 2##AK295375|SLC12A1|6557|solute carrier family 12 (sodium/potassium/chloride transporters), member 1##AB037762|MYEF2|50804|myelin expression factor 2##BC152420|MYEF2|50804|myelin expression factor 2##BC152451|MYEF2|50804|myelin expression factor 2##BC068523|MYEF2|50804|myelin expression factor 2##AK023133|MYEF2|50804|myelin expression factor 2##NM_016132|MYEF2|50804|myelin expression factor 2##NM_001025248|DUT|1854|deoxyuridine triphosphatase##NM_001025249|DUT|1854|deoxyuridine triphosphatase##AK000629|DUT|1854|deoxyuridine triphosphatase##BC070339|DUT|1854|deoxyuridine triphosphatase##BC110377|DUT|1854|deoxyuridine triphosphatase##AK298464|DUT|1854|deoxyuridine triphosphatase##U90223|DUT|1854|deoxyuridine triphosphatase##AK291515|DUT|1854|deoxyuridine triphosphatase##NM_001948|DUT|1854|deoxyuridine triphosphatase##AK312122|DUT|1854|deoxyuridine triphosphatase##U31930|DUT|1854|deoxyuridine triphosphatase##U62891|DUT|1854|deoxyuridine triphosphatase##L11877|DUT|1854|deoxyuridine triphosphatase##AB049113|DUT|1854|deoxyuridine triphosphatase##M89913|DUT|1854|deoxyuridine triphosphatase##DQ891191|DUT|1854|deoxyuridine triphosphatase##DQ894375|DUT|1854|deoxyuridine triphosphatase##CR541720|DUT|1854|deoxyuridine triphosphatase##CR541781|DUT|1854|deoxyuridine triphosphatase##L13923|FBN1|2200|fibrillin 1	0.528121	CTCF.p2:-14:0.487
chr2	225873774	225873923	reg1031003.p2	4.085	+	TSC_hg19_v1_chr2_-_225811768 EU236710	-62094	-	TSC_hg19_v1_chr2_-_225450116 NM_003590	-423728	-	TSC_hg19_v1_chr2_-_225450056 BC039598	-423773	-	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	33500	-	NM_020864 BC131727 AB040919	391797	+	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	1789631	-	EU236710|DOCK10|55619|dedicator of cytokinesis 10##NM_003590|CUL3|8452|cullin 3##BC039598|CUL3|8452|cullin 3##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1	0.074896	
chr2	242150891	242151019	reg1034372.p1	4.085	+	AY617079 AY617080 NM_001001666 NM_001001891	-23032	+	AK294043 TSC_hg19_v1_chr2_+_242089896 BC013001 BC000910 NM_002712 Z50749 BC012397 AB385583 BT007296 BT020134	-61064	+	CR749231 NM_001252120	-61562	-	TSC_hg19_v1_chr2_-_242212216 M64098	61265	-	TSC_hg19_v1_chr2_-_242212245 AK300312 NM_001243900 NM_203346	61289	-	TSC_hg19_v1_chr2_-_242212511 AK309075	61561	-	AY617079|ANO7|50636|anoctamin 7##AY617080|ANO7|50636|anoctamin 7##NM_001001666|ANO7|50636|anoctamin 7##NM_001001891|ANO7|50636|anoctamin 7##AK294043|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC013001|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC000910|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##NM_002712|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##Z50749|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC012397|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT007296|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT020134|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##CR749231|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252120|PASK|23178|PAS domain containing serine/threonine kinase##M64098|HDLBP|3069|high density lipoprotein binding protein##AK300312|HDLBP|3069|high density lipoprotein binding protein##NM_001243900|HDLBP|3069|high density lipoprotein binding protein##NM_203346|HDLBP|3069|high density lipoprotein binding protein##AK309075|HDLBP|3069|high density lipoprotein binding protein	0.345246	CTCF.p2:18:0.345
chr3	124754234	124754353	reg1032872.p2	4.085	+	BC067235 TSC_hg19_v1_chr3_-_124732404	-21901	-	AF286113 AB035807 AY358831 TSC_hg19_v1_chr3_-_124653596 NM_033049	-100710	-	TSC_hg19_v1_chr3_-_124606213 BC006541 NM_002213 X53002	-148082	-	AB384586 NM_020733 TSC_hg19_v1_chr3_-_124774842	20507	-	BC063528 TSC_hg19_v1_chr3_-_124842461	88162	-	AF345197 HQ258349 BC126158 BC126160 AF390442 NM_001195483	175924	-	BC067235|HEG1|57493|HEG homolog 1 (zebrafish)##AF286113|MUC13|56667|mucin 13, cell surface associated##AB035807|MUC13|56667|mucin 13, cell surface associated##AY358831|MUC13|56667|mucin 13, cell surface associated##NM_033049|MUC13|56667|mucin 13, cell surface associated##BC006541|ITGB5|3693|integrin, beta 5##NM_002213|ITGB5|3693|integrin, beta 5##X53002|ITGB5|3693|integrin, beta 5##NM_020733|HEG1|57493|HEG homolog 1 (zebrafish)##BC063528|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF345197|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##HQ258349|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126158|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##BC126160|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##AF390442|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8##NM_001195483|SLC12A8|84561|solute carrier family 12 (potassium/chloride transporters), member 8	0.0	
chr4	191043996	191044122	reg1026667.p1	4.085	+	NM_033178 NM_001127386 NM_001127388 NM_001127389 NM_001164467 NM_001177376 NM_012147	-32162	+	NM_001127386 NM_001127388 NM_001127389 NM_001164467 NM_012147	-35459	+	NM_033178 NM_001127386 NM_001127388 NM_001127389 NM_001164467 NM_001177376 NM_012147	-38755	+	None	None	None	None	None	None	None	None	None	NM_033178|DUX4|22947|double homeobox 4##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_001177376|DUX4L4|441056|double homeobox 4 like 4##NM_012147|DUX2|26583|double homeobox 2##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_012147|DUX2|26583|double homeobox 2##NM_033178|DUX4|22947|double homeobox 4##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_001177376|DUX4L4|441056|double homeobox 4 like 4##NM_012147|DUX2|26583|double homeobox 2	0.0	
chr4	88418429	88418566	reg1040616.p1	4.085	+	TSC_hg19_v1_chr4_+_88343781 NM_001248011 NM_024047 AK027295 AK074845 NM_198038 AF265341 AF273028 AK075408 AK308028 BC000542 AY359123 CU674266	-74618	+	TSC_hg19_v1_chr4_-_88312341 AK075348 BC008650 BC036001 BC016367 BC011995 NM_016245	-106106	-	AB529195 CU690256 CU679009 AF273056 AY358553 TSC_hg19_v1_chr4_-_88312322 BC014327 BC021673	-106226	-	AK316533 AY513278 AK300956 BC010383 AK294335 BC022484 AK298039 X82157 BX647713 AL833430 AK304628 BC033721 X86693 AK304494 TSC_hg19_v1_chr4_-_88450525	31889	-	TSC_hg19_v1_chr4_-_88450604 NM_001128310 NM_004684	32130	-	NM_014208	111183	+	NM_001248011|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##NM_024047|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK027295|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK074845|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##NM_198038|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AF265341|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AF273028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK075408|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK308028|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##BC000542|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AY359123|NUDT9|53343|nudix (nucleoside diphosphate linked moiety X)-type motif 9##AK075348|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC008650|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC036001|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC016367|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC011995|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##NM_016245|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AF273056|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AY358553|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC014327|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##BC021673|HSD17B11|51170|hydroxysteroid (17-beta) dehydrogenase 11##AK316533|SPARCL1|8404|SPARC-like 1 (hevin)##AY513278|SPARCL1|8404|SPARC-like 1 (hevin)##AK300956|SPARCL1|8404|SPARC-like 1 (hevin)##BC010383|SPARCL1|8404|SPARC-like 1 (hevin)##AK294335|SPARCL1|8404|SPARC-like 1 (hevin)##BC022484|SPARCL1|8404|SPARC-like 1 (hevin)##AK298039|SPARCL1|8404|SPARC-like 1 (hevin)##X82157|SPARCL1|8404|SPARC-like 1 (hevin)##BX647713|SPARCL1|8404|SPARC-like 1 (hevin)##AL833430|SPARCL1|8404|SPARC-like 1 (hevin)##AK304628|SPARCL1|8404|SPARC-like 1 (hevin)##BC033721|SPARCL1|8404|SPARC-like 1 (hevin)##X86693|SPARCL1|8404|SPARC-like 1 (hevin)##AK304494|SPARCL1|8404|SPARC-like 1 (hevin)##NM_001128310|SPARCL1|8404|SPARC-like 1 (hevin)##NM_004684|SPARCL1|8404|SPARC-like 1 (hevin)##NM_014208|DSPP|1834|dentin sialophosphoprotein	0.997566	CTCF.p2:-9:0.998
chr7	102213028	102213112	reg1031149.p2	4.085	+	AF468111 BC110985 TSC_hg19_v1_chr7_-_102213031 AB209398 BC141857 AK309487 NM_001097615	-30	-	AJ277739 AJ277740 AJ277741 AB384935 BC056864 BC071870 TSC_hg19_v1_chr7_-_102212997 BC044209 BC050598	-83	-	AK302217 NM_001031618 NM_001166339	-21392	+	HQ258652 BC110873 TSC_hg19_v1_chr7_-_102257170 AB011110 BC113663 BC143584 BC143585 AK308653	44087	-	TSC_hg19_v1_chr7_-_102257205 AK026441 AK310176 NM_001079877 NM_006989 AY029206	44154	-	EU341824 NM_001114403 AK296589	70206	-	AF468111|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AB209398|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_001097615|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277739|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AJ277740|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277741|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##HQ258652|RASA4|10156|RAS p21 protein activator 4##BC110873|RASA4|10156|RAS p21 protein activator 4##AB011110|RASA4|10156|RAS p21 protein activator 4##BC113663|RASA4|10156|RAS p21 protein activator 4##BC143584|RASA4|10156|RAS p21 protein activator 4##BC143585|RASA4|10156|RAS p21 protein activator 4##AK308653|RASA4|10156|RAS p21 protein activator 4##AK026441|RASA4|10156|RAS p21 protein activator 4##AK310176|RASA4|10156|RAS p21 protein activator 4##NM_001079877|RASA4|10156|RAS p21 protein activator 4##NM_006989|RASA4|10156|RAS p21 protein activator 4##EU341824|UPK3BL|100134938|uroplakin 3B-like##NM_001114403|UPK3BL|100134938|uroplakin 3B-like	0.374863	CTCF.p2:23:0.375
chr9	103086941	103087112	reg1029967.p1	4.085	+	TSC_hg19_v1_chr9_+_102861574 BC006370 BC111761 BC112351	-225405	+	AF039217 TSC_hg19_v1_chr9_+_102861540 BC063847 AK304851 BC072429 BC110864	-225486	+	TSC_hg19_v1_chr9_+_102861524 BC041665 NM_014425 NM_183245 AK312795	-225545	+	AK302619 NM_001161584	27826	-	BC030652 TSC_hg19_v1_chr9_-_103115211 AK304869 AK000294 AB060968 AK303662 AK298916 NM_017746	28159	-	BC042955 TSC_hg19_v1_chr9_+_103115352 AK056351	28334	+	BC006370|INVS|27130|inversin##BC111761|INVS|27130|inversin##BC112351|INVS|27130|inversin##AF039217|INVS|27130|inversin##BC063847|INVS|27130|inversin##AK304851|INVS|27130|inversin##BC072429|INVS|27130|inversin##BC041665|INVS|27130|inversin##NM_014425|INVS|27130|inversin##NM_183245|INVS|27130|inversin##AK312795|INVS|27130|inversin##AK302619|TEX10|54881|testis expressed 10##NM_001161584|TEX10|54881|testis expressed 10##BC030652|TEX10|54881|testis expressed 10##AK304869|TEX10|54881|testis expressed 10##AK000294|TEX10|54881|testis expressed 10##AB060968|TEX10|54881|testis expressed 10##AK303662|TEX10|54881|testis expressed 10##AK298916|TEX10|54881|testis expressed 10##NM_017746|TEX10|54881|testis expressed 10	0.998027	CTCF.p2:58:0.998
chr10	131457089	131457181	reg1027586.p1	4.084	+	TSC_hg19_v1_chr10_+_131265507 BC000824	-191621	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	-191664	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-1532607	-	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	304918	-	TSC_hg19_v1_chr10_-_131762539 AK097335	305390	-	TSC_hg19_v1_chr10_-_131909090 EU250747 AK094118	451946	-	BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3##AK097335|EBF3|253738|early B-cell factor 3##EU250747|LOC387723|387723|uncharacterized LOC387723##AK094118|LOC387723|387723|uncharacterized LOC387723	0.030628	
chr12	46119600	46119701	reg1027717.p1	4.084	+	AL832340 NM_001142678	-433185	+	TSC_hg19_v1_chr12_+_45609916 BC098410	-509743	+	TSC_hg19_v1_chr12_+_45609867 AK302819 NM_001142680	-509779	+	TSC_hg19_v1_chr12_-_46121280 BC037237 BC008245	1623	-	TSC_hg19_v1_chr12_-_46121531 BC047417	1880	-	TSC_hg19_v1_chr12_+_46123488 AK127872	3833	+	AL832340|ANO6|196527|anoctamin 6##NM_001142678|ANO6|196527|anoctamin 6##BC098410|ANO6|196527|anoctamin 6##AK302819|ANO6|196527|anoctamin 6##NM_001142680|ANO6|196527|anoctamin 6##BC037237|LOC400027|400027|uncharacterized LOC400027##BC008245|LOC400027|400027|uncharacterized LOC400027##BC047417|LOC400027|400027|uncharacterized LOC400027##AK127872|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)	0.0	
chr14	24801302	24801483	reg1011804.p1	4.084	+	NM_181657	-19080	+	TSC_hg19_v1_chr14_+_24780707 D89079 NM_001143919 U41070	-20698	+	TSC_hg19_v1_chr14_-_24780642 AK122828	-20743	-	BX248285 BC027943 AK122714 AK126468 NM_001198568 NM_001198592 NM_139247 TSC_hg19_v1_chr14_-_24804278	2873	-	AF156884 AY453693 AY494982 AY494983 CU692020 TSC_hg19_v1_chr14_-_24809197 BC062584 AK296309 BC041668 AK296140 AK075275 NM_006871	7747	-	AK310445 EU887632 EU887633 EU887634 NM_001136022 NM_001198967	34752	+	NM_181657|LTB4R|1241|leukotriene B4 receptor##D89079|LTB4R|1241|leukotriene B4 receptor##NM_001143919|LTB4R|1241|leukotriene B4 receptor##U41070|LTB4R|1241|leukotriene B4 receptor##AK122828|CIDEB|27141|cell death-inducing DFFA-like effector b##BX248285|ADCY4|196883|adenylate cyclase 4##BC027943|ADCY4|196883|adenylate cyclase 4##AK122714|ADCY4|196883|adenylate cyclase 4##AK126468|ADCY4|196883|adenylate cyclase 4##NM_001198568|ADCY4|196883|adenylate cyclase 4##NM_001198592|ADCY4|196883|adenylate cyclase 4##NM_139247|ADCY4|196883|adenylate cyclase 4##AF156884|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY453693|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494982|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AY494983|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC062584|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296309|RIPK3|11035|receptor-interacting serine-threonine kinase 3##BC041668|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK296140|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK075275|RIPK3|11035|receptor-interacting serine-threonine kinase 3##NM_006871|RIPK3|11035|receptor-interacting serine-threonine kinase 3##AK310445|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887632|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887633|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##EU887634|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001136022|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4##NM_001198967|NFATC4|4776|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4	0.0	
chr15	31645490	31645623	reg1027799.p1	4.084	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-26218	+	NM_001243538	-122507	-	GQ502181 HM135791 NM_001252020	-192128	-	AJ430383 NM_130901	301985	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	517273	-	TSC_hg19_v1_chr15_-_32162898 AK126002	517387	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.059578	
chr16	74684976	74685124	reg1036866.p1	4.084	+	TSC_hg19_v1_chr16_-_74641016 NM_001145666 NM_001145667 NM_012201	-44023	-	TSC_hg19_v1_chr16_-_74641004 AK027032 AK304156 U28811 BC060822	-44046	-	TSC_hg19_v1_chr16_-_74640996 BC040133 U64791 BC031836	-44095	-	TSC_hg19_v1_chr16_-_74700738 BC059371	15680	-	TSC_hg19_v1_chr16_-_74700758 AK291200	15702	-	TSC_hg19_v1_chr16_-_74700775 NM_018124	15727	-	NM_001145666|GLG1|2734|golgi glycoprotein 1##NM_001145667|GLG1|2734|golgi glycoprotein 1##NM_012201|GLG1|2734|golgi glycoprotein 1##AK027032|GLG1|2734|golgi glycoprotein 1##AK304156|GLG1|2734|golgi glycoprotein 1##U28811|GLG1|2734|golgi glycoprotein 1##BC060822|GLG1|2734|golgi glycoprotein 1##BC040133|GLG1|2734|golgi glycoprotein 1##U64791|GLG1|2734|golgi glycoprotein 1##BC031836|GLG1|2734|golgi glycoprotein 1##BC059371|RFWD3|55159|ring finger and WD repeat domain 3##AK291200|RFWD3|55159|ring finger and WD repeat domain 3##NM_018124|RFWD3|55159|ring finger and WD repeat domain 3	0.39889	CTCF.p2:11:0.399
chr16	80375255	80375396	reg1037342.p1	4.084	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-740710	-	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-2241870	+	NM_001244755	-2312340	+	AF125108 NM_130897 BC054892 BC035232	199563	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	462722	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	664759	+	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N	0.25946	CTCF.p2:15:0.259
chr2	102857159	102857339	reg1002552.p1	4.084	+	AF284434 NM_003854 U49065 BC107064	-53801	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	-86829	+	TSC_hg19_v1_chr2_+_102759205 X16896	-98017	+	AB012701 NM_016232 AK313967 AK303389	70742	+	BC012580 BC030975 NM_003856 AK291578 AB029084	96482	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	121859	+	AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##X16896|IL1R1|3554|interleukin 1 receptor, type I##AB012701|IL1RL1|9173|interleukin 1 receptor-like 1##NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1##AK313967|IL18R1|8809|interleukin 18 receptor 1##AK303389|IL1RL1|9173|interleukin 1 receptor-like 1##BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1	0.0	
chr2	120048564	120048729	reg1035581.p1	4.084	+	TSC_hg19_v1_chr2_+_119981409 AF423424 AK001691 AY029585 AY214461 BX538047 AK291608 AF238864 AF262322 AY082673 BC095421 BC042150	-67219	+	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	-67261	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	-132242	-	BC126395 BC126397 BC144012 BC144014 BC171737 NM_001017927 TSC_hg19_v1_chr2_-_120124372 BC047365 BC105805	75692	-	NM_001079862 TSC_hg19_v1_chr2_+_120124552 FM213122 FM213123 FM213124 FM213125 FM213126 FM213128 NM_001178041 NM_001178042 NM_001178043 NM_020548	75883	+	TSC_hg19_v1_chr2_+_120124566 M15887 BC006466	75938	+	AF423424|STEAP3|55240|STEAP family member 3, metalloreductase##AK001691|STEAP3|55240|STEAP family member 3, metalloreductase##AY029585|STEAP3|55240|STEAP family member 3, metalloreductase##AY214461|STEAP3|55240|STEAP family member 3, metalloreductase##BX538047|STEAP3|55240|STEAP family member 3, metalloreductase##AK291608|STEAP3|55240|STEAP family member 3, metalloreductase##AF238864|STEAP3|55240|STEAP family member 3, metalloreductase##AF262322|STEAP3|55240|STEAP family member 3, metalloreductase##AY082673|STEAP3|55240|STEAP family member 3, metalloreductase##BC095421|STEAP3|55240|STEAP family member 3, metalloreductase##BC042150|STEAP3|55240|STEAP family member 3, metalloreductase##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##BC126395|C2orf76|130355|chromosome 2 open reading frame 76##BC126397|C2orf76|130355|chromosome 2 open reading frame 76##BC144012|C2orf76|130355|chromosome 2 open reading frame 76##BC144014|C2orf76|130355|chromosome 2 open reading frame 76##BC171737|C2orf76|130355|chromosome 2 open reading frame 76##NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76##BC047365|C2orf76|130355|chromosome 2 open reading frame 76##BC105805|C2orf76|130355|chromosome 2 open reading frame 76##NM_001079862|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213122|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213123|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213124|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213125|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213126|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213128|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178041|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178042|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178043|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_020548|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##M15887|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##BC006466|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)	0.999742	CTCF.p2:-8:1.000
chr4	7773623	7773690	reg1038289.p2	4.084	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	-337000	-	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-579261	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-703855	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	167732	-	TSC_hg19_v1_chr4_-_8073714 AK094798	300060	-	TSC_hg19_v1_chr4_-_8129388 AK301060	355729	-	BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2	0.386302	CTCF.p2:5:0.386
chr4	77997223	77997403	reg1033485.p1	4.084	+	TSC_hg19_v1_chr4_-_77997145 BC000420 BC004975 NM_006835 AB209766 AK301111 AK312632	-161	-	AK124592 CR627457 TSC_hg19_v1_chr4_+_77954068	-43308	+	TSC_hg19_v1_chr4_+_77871005 AK001711 AL110300 AK302700 BC063615 GU727629 AB587498	-126313	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	81048	+	TSC_hg19_v1_chr4_+_78078398 U47414	81147	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	82180	+	BC000420|CCNI|10983|cyclin I##BC004975|CCNI|10983|cyclin I##NM_006835|CCNI|10983|cyclin I##AB209766|CCNI|10983|cyclin I##AK301111|CCNI|10983|cyclin I##AK312632|CCNI|10983|cyclin I##AK124592|SEPT11|55752|septin 11##AK001711|SEPT11|55752|septin 11##AL110300|SEPT11|55752|septin 11##AK302700|SEPT11|55752|septin 11##BC063615|SEPT11|55752|septin 11##GU727629|SEPT11|55752|septin 11##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2	0.0	
chr6	114302227	114302345	reg1032843.p1	4.084	+	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-9950	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	-10014	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	-123552	+	AF503292 NM_153612 BC093911 BC093913	81738	-	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	2079596	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	2119723	+	BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	1.486139	CTCF.p2:16:0.909	CTCF.p2:57:0.578
chr6	51423983	51424115	reg1034309.p1	4.084	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-637514	+	AY028376 NM_172238	-742793	+	DQ012016 NM_001037498	-1407686	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	528346	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	627157	+	AF384857 JF305974 AB590713 BC070124 NM_052872	685212	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.804244	CTCF.p2:0:0.804
chr7	37844003	37844130	reg1029592.p1	4.084	+	AB529245 AY288420 BC120951 BC120952 NM_181791	-64071	+	BC043356 TSC_hg19_v1_chr7_+_37723380	-120684	+	NM_001206480	-355172	-	BC036816 NM_016616	44132	+	AF026692 BC047684 BC058911 AK313029 TSC_hg19_v1_chr7_-_37956420 AK303977 AK302357	112345	-	TSC_hg19_v1_chr7_-_37956526 BC032828 NM_003014	112454	-	AY288420|GPR141|353345|G protein-coupled receptor 141##BC120951|GPR141|353345|G protein-coupled receptor 141##BC120952|GPR141|353345|G protein-coupled receptor 141##NM_181791|GPR141|353345|G protein-coupled receptor 141##NM_001206480|ELMO1|9844|engulfment and cell motility 1##BC036816|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##NM_016616|TXNDC3|51314|thioredoxin domain containing 3 (spermatozoa)##AF026692|SFRP4|6424|secreted frizzled-related protein 4##BC047684|SFRP4|6424|secreted frizzled-related protein 4##BC058911|SFRP4|6424|secreted frizzled-related protein 4##AK313029|SFRP4|6424|secreted frizzled-related protein 4##AK303977|SFRP4|6424|secreted frizzled-related protein 4##AK302357|SFRP4|6424|secreted frizzled-related protein 4##BC032828|SFRP4|6424|secreted frizzled-related protein 4##NM_003014|SFRP4|6424|secreted frizzled-related protein 4	0.949617	CTCF.p2:50:0.950
chr7	6146200	6146284	reg1029468.p2	4.084	+	TSC_hg19_v1_chr7_+_6144605 AK022759 AY618868 BC060846 AK309375	-1644	+	TSC_hg19_v1_chr7_+_6144564 NM_032172 AK298164	-1699	+	TSC_hg19_v1_chr7_-_6098822 NM_001134335 NM_014413	-47395	-	AB528964 DQ891736 DQ894912 EU176610 AJ223957 TSC_hg19_v1_chr7_-_6312242 AJ005197 NM_004227 AK313728 BC028717	165989	-	TSC_hg19_v1_chr7_-_6388581 AK311878 AF533707 BC006110 NM_001037163 BC142977	242268	-	TSC_hg19_v1_chr7_+_6414179 NM_006908 NM_018890 AK054993 BC107748 AK291806 AB209410 BC050687 AK291815 AY279384 BC004247 AB451238 AB451363 AB464133 AF136373 AF498964 AJ132694 BT007121 CU690768 EU831965 EU832058 EU832640 EU832717 M29870 M31467	267985	+	AK022759|USP42|84132|ubiquitin specific peptidase 42##AY618868|USP42|84132|ubiquitin specific peptidase 42##BC060846|USP42|84132|ubiquitin specific peptidase 42##AK309375|USP42|84132|ubiquitin specific peptidase 42##NM_032172|USP42|84132|ubiquitin specific peptidase 42##AK298164|USP42|84132|ubiquitin specific peptidase 42##NM_001134335|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##NM_014413|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##DQ891736|CYTH3|9265|cytohesin 3##DQ894912|CYTH3|9265|cytohesin 3##EU176610|CYTH3|9265|cytohesin 3##AJ223957|CYTH3|9265|cytohesin 3##AJ005197|CYTH3|9265|cytohesin 3##NM_004227|CYTH3|9265|cytohesin 3##AK313728|CYTH3|9265|cytohesin 3##BC028717|CYTH3|9265|cytohesin 3##AK311878|C7orf70|84792|chromosome 7 open reading frame 70##AF533707|C7orf70|84792|chromosome 7 open reading frame 70##BC006110|C7orf70|84792|chromosome 7 open reading frame 70##NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70##BC142977|C7orf70|84792|chromosome 7 open reading frame 70##NM_006908|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##NM_018890|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK054993|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC107748|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291806|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB209410|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC050687|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291815|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AY279384|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC004247|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451238|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451363|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF136373|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF498964|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AJ132694|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BT007121|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU831965|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832058|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832640|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832717|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M29870|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M31467|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	0.066515	
chrX	77770346	77770449	reg1032140.p1	4.084	+	BC035750 DQ131801 DQ131800 AK023929 DQ131802 NM_006639 AK313643 DQ131799	-187314	-	AB529179 DQ891928 DQ895115 BC071649 TSC_hg19_v1_chrX_-_77395133 AF220509 BC009566 AK312579 BC010350 BC146952 BC146960 NM_015975	-375254	-	AB062432 TSC_hg19_v1_chrX_+_77359778 BC104837 BC113568 BC023234 AY423725 AB385546 CR456716 HQ258236	-410595	+	AK096184 NM_152694	144427	-	NM_005296 AK314134	232811	+	NM_014499 NM_198333 AK313218 AK292138 BC051875	430475	+	BC035750|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131801|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131800|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK023929|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131802|CYSLTR1|10800|cysteinyl leukotriene receptor 1##NM_006639|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK313643|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131799|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ891928|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##DQ895115|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC071649|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AF220509|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC009566|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AK312579|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC010350|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146952|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146960|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##NM_015975|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AB062432|PGK1|5230|phosphoglycerate kinase 1##BC104837|PGK1|5230|phosphoglycerate kinase 1##BC113568|PGK1|5230|phosphoglycerate kinase 1##BC023234|PGK1|5230|phosphoglycerate kinase 1##AY423725|PGK1|5230|phosphoglycerate kinase 1##CR456716|PGK1|5230|phosphoglycerate kinase 1##HQ258236|PGK1|5230|phosphoglycerate kinase 1##AK096184|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_152694|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	0.455902	CTCF.p2:10:0.456
chr11	34195654	34195752	reg1000056.p1	4.083	+	TSC_hg19_v1_chr11_+_34127208 AK294044 AL136882 AK001636 BC014440 BC020205	-68453	+	NM_001144030 NM_024662 TSC_hg19_v1_chr11_+_34127175 AK022241 AK225341 BC035558 AB051496	-68546	+	TSC_hg19_v1_chr11_+_34073956 EU176359 EU176467 EU176701	-121666	+	TSC_hg19_v1_chr11_-_34379556 AK291744 NM_145804	183852	-	TSC_hg19_v1_chr11_+_34460487 AK291585 NM_001752 BC110398 AK315350 X04076 BC112217 BC112219	264771	+	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	264846	+	AK294044|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AL136882|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK001636|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC014440|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC020205|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_001144030|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_024662|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK022241|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK225341|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC035558|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AB051496|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##EU176359|CAPRIN1|4076|cell cycle associated protein 1##EU176467|CAPRIN1|4076|cell cycle associated protein 1##EU176701|CAPRIN1|4076|cell cycle associated protein 1##AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##AK291585|CAT|847|catalase##NM_001752|CAT|847|catalase##BC110398|CAT|847|catalase##AK315350|CAT|847|catalase##X04076|CAT|847|catalase##BC112217|CAT|847|catalase##BC112219|CAT|847|catalase##AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase	0.0	
chr2	172176777	172176845	reg1030000.p1	4.083	+	AK090779 NM_001136554	-88988	-	TSC_hg19_v1_chr2_-_172017431 AK091975 NM_012290	-159312	-	TSC_hg19_v1_chr2_-_172017240 DQ890904 DQ894057 BC032657 D50927 AK292508 AF162666 AB004885	-159715	-	TSC_hg19_v1_chr2_-_172290501 AK124092 BC025250 AK024046	113715	-	TSC_hg19_v1_chr2_+_172290743 AK307877 NM_001164821 NM_025000	113951	+	TSC_hg19_v1_chr2_+_172290824 CR933646	114000	+	AK090779|TLK1|9874|tousled-like kinase 1##NM_001136554|TLK1|9874|tousled-like kinase 1##AK091975|TLK1|9874|tousled-like kinase 1##NM_012290|TLK1|9874|tousled-like kinase 1##DQ890904|TLK1|9874|tousled-like kinase 1##DQ894057|TLK1|9874|tousled-like kinase 1##BC032657|TLK1|9874|tousled-like kinase 1##D50927|TLK1|9874|tousled-like kinase 1##AK292508|TLK1|9874|tousled-like kinase 1##AF162666|TLK1|9874|tousled-like kinase 1##AB004885|TLK1|9874|tousled-like kinase 1##AK124092|METTL8|79828|methyltransferase like 8##BC025250|METTL8|79828|methyltransferase like 8##AK024046|METTL8|79828|methyltransferase like 8##AK307877|DCAF17|80067|DDB1 and CUL4 associated factor 17##NM_001164821|DCAF17|80067|DDB1 and CUL4 associated factor 17##NM_025000|DCAF17|80067|DDB1 and CUL4 associated factor 17##CR933646|DCAF17|80067|DDB1 and CUL4 associated factor 17	0.0	
chr2	3465745	3465926	reg1004114.p1	4.083	+	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	-82330	+	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	-84279	-	TSC_hg19_v1_chr2_-_2335085 AK307797	-1130751	-	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	57463	-	TSC_hg19_v1_chr2_-_3523345 NM_018269	57516	-	AJ224117 BT019670 CR541820 DQ892597 DQ895824 TSC_hg19_v1_chr2_-_3605880 AF048994 AK096913 AF048995 AK075490	140044	-	AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK307797|MYT1L|23040|myelin transcription factor 1-like##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1##NM_018269|ADI1|55256|acireductone dioxygenase 1##AJ224117|RNASEH1|246243|ribonuclease H1##BT019670|RNASEH1|246243|ribonuclease H1##CR541820|RNASEH1|246243|ribonuclease H1##DQ892597|RNASEH1|246243|ribonuclease H1##DQ895824|RNASEH1|246243|ribonuclease H1##AF048994|RNASEH1|246243|ribonuclease H1##AK096913|RNASEH1|246243|ribonuclease H1##AF048995|RNASEH1|246243|ribonuclease H1##AK075490|RNASEH1|246243|ribonuclease H1	0.625177	CTCF.p2:-72:0.260	CTCF.p2:-106:0.272
chr4	112085877	112085981	reg1035934.p2	4.083	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-522651	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-527760	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-541654	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	980685	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	1067155	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	1121072	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.996556	CTCF.p2:-18:0.997
chr6	66348089	66348214	reg1035555.p2	4.083	+	AY358133 NM_198283 AK310478	-58446	-	AF091622 BC113650 BC113652 NM_015153 D87685 AB385299	-1991709	+	TSC_hg19_v1_chr6_+_64346027 BX648268 AK290491	-2002134	+	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	68942	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	2250877	-	AL833240 TSC_hg19_v1_chr6_-_69345026	2996821	-	AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##AF091622|PHF3|23469|PHD finger protein 3##BC113650|PHF3|23469|PHD finger protein 3##BC113652|PHF3|23469|PHD finger protein 3##NM_015153|PHF3|23469|PHD finger protein 3##D87685|PHF3|23469|PHD finger protein 3##BX648268|PHF3|23469|PHD finger protein 3##AK290491|PHF3|23469|PHD finger protein 3##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3	0.0	
chr11	120174059	120174137	reg1002533.p2	4.082	+	AK291993 NM_014352 AF162278 BC101649 BC143593 BC143594 BC143595 AF133895 AJ012214 EU446698	-63121	+	AK302212 NM_001244682	-66750	+	TSC_hg19_v1_chr11_+_120081739 BC047726 NM_178507 BC008339	-92385	+	AK128040 NM_001198670 NM_001198671 NM_001198672 NM_001198673 NM_001198674 NM_001198675 NM_174926	21739	+	AK096207 AK304086 TSC_hg19_v1_chr11_+_120196007 AK289680 AK294713 BC015232	21920	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	33006	+	AK291993|POU2F3|25833|POU class 2 homeobox 3##NM_014352|POU2F3|25833|POU class 2 homeobox 3##AF162278|POU2F3|25833|POU class 2 homeobox 3##BC101649|POU2F3|25833|POU class 2 homeobox 3##BC143593|POU2F3|25833|POU class 2 homeobox 3##BC143594|POU2F3|25833|POU class 2 homeobox 3##BC143595|POU2F3|25833|POU class 2 homeobox 3##AF133895|POU2F3|25833|POU class 2 homeobox 3##AJ012214|POU2F3|25833|POU class 2 homeobox 3##EU446698|POU2F3|25833|POU class 2 homeobox 3##AK302212|POU2F3|25833|POU class 2 homeobox 3##NM_001244682|POU2F3|25833|POU class 2 homeobox 3##BC047726|OAF|220323|OAF homolog (Drosophila)##NM_178507|OAF|220323|OAF homolog (Drosophila)##BC008339|OAF|220323|OAF homolog (Drosophila)##AK128040|TMEM136|219902|transmembrane protein 136##NM_001198670|TMEM136|219902|transmembrane protein 136##NM_001198671|TMEM136|219902|transmembrane protein 136##NM_001198672|TMEM136|219902|transmembrane protein 136##NM_001198673|TMEM136|219902|transmembrane protein 136##NM_001198674|TMEM136|219902|transmembrane protein 136##NM_001198675|TMEM136|219902|transmembrane protein 136##NM_174926|TMEM136|219902|transmembrane protein 136##AK096207|TMEM136|219902|transmembrane protein 136##AK304086|TMEM136|219902|transmembrane protein 136##AK289680|TMEM136|219902|transmembrane protein 136##AK294713|TMEM136|219902|transmembrane protein 136##BC015232|TMEM136|219902|transmembrane protein 136##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12	0.0	
chr12	116996818	116996999	reg1018987.p1	4.082	+	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	-25679	+	TSC_hg19_v1_chr12_-_116715263 AY338463	-281748	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	-281958	-	NM_001085481	277	+	TSC_hg19_v1_chr12_-_117175822 AK309652 BC019843 AK025068 NM_024738	178830	-	TSC_hg19_v1_chr12_-_117175868 AK222983 AK298857	178961	-	AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173##AY338463|MED13L|23389|mediator complex subunit 13-like##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##NM_001085481|MAP1LC3B2|643246|microtubule-associated protein 1 light chain 3 beta 2##AK309652|C12orf49|79794|chromosome 12 open reading frame 49##BC019843|C12orf49|79794|chromosome 12 open reading frame 49##AK025068|C12orf49|79794|chromosome 12 open reading frame 49##NM_024738|C12orf49|79794|chromosome 12 open reading frame 49##AK222983|C12orf49|79794|chromosome 12 open reading frame 49##AK298857|C12orf49|79794|chromosome 12 open reading frame 49	0.0	
chr13	41345346	41345492	reg1034940.p2	4.082	+	TSC_hg19_v1_chr13_-_41345327 NM_005830	-87	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	-127	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	-104707	-	NM_014252 TSC_hg19_v1_chr13_+_41363596 BC002702	18170	+	TSC_hg19_v1_chr13_+_41363716 AK313602 AK296862 AF112968	18265	+	AF177333 TSC_hg19_v1_chr13_+_41363756	18347	+	NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##NM_014252|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##BC002702|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK313602|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK296862|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AF112968|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AF177333|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15	0.0	
chr14	77408777	77408922	reg1032906.p1	4.082	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-116054	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-129587	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-129639	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	85835	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	86211	-	AK124327 TSC_hg19_v1_chr14_-_77542533	133684	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.014866	
chr16	10845220	10845345	reg1035046.p1	4.082	+	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-7578	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-56517	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	-170792	-	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	67266	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	125830	+	BC071683 TSC_hg19_v1_chr16_-_11036171	190884	-	AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)	0.0	
chr17	70536432	70536528	reg1008268.p1	4.082	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-419240	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-419310	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-419321	+	AK000477 TSC_hg19_v1_chr17_-_70588944	52463	-	AF331643 TSC_hg19_v1_chr17_-_71088816	552336	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	552343	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.040917	
chr17	73616191	73616299	reg1029202.p1	4.082	+	TSC_hg19_v1_chr17_+_73598147 BC033247	-18034	+	AK074680 TSC_hg19_v1_chr17_+_73585572	-30683	+	AF418286 AF418287 AF418288 AF418289 AF418290 AF418291 TSC_hg19_v1_chr17_+_73584199	-32070	+	BC027861 NM_001162995	13268	+	BC062771 NM_001162997 AK131023	26436	+	BC063440 EF560729 TSC_hg19_v1_chr17_-_73663235 BC016911 AK075084 AK304168 AB042823 AB042824 AB042825 NM_001003715 NM_001003716 NM_004259	47003	-	BC033247|MYO15B|80022|myosin XVB pseudogene##AK074680|MYO15B|80022|myosin XVB pseudogene##AF418286|MYO15B|80022|myosin XVB pseudogene##AF418287|MYO15B|80022|myosin XVB pseudogene##AF418288|MYO15B|80022|myosin XVB pseudogene##AF418289|MYO15B|80022|myosin XVB pseudogene##AF418290|MYO15B|80022|myosin XVB pseudogene##AF418291|MYO15B|80022|myosin XVB pseudogene##BC027861|C17orf109|643008|chromosome 17 open reading frame 109##NM_001162995|C17orf109|643008|chromosome 17 open reading frame 109##BC062771|C17orf110|100130933|chromosome 17 open reading frame 110##NM_001162997|C17orf110|100130933|chromosome 17 open reading frame 110##AK131023|C17orf110|100130933|chromosome 17 open reading frame 110##BC063440|RECQL5|9400|RecQ protein-like 5##EF560729|RECQL5|9400|RecQ protein-like 5##BC016911|RECQL5|9400|RecQ protein-like 5##AK075084|RECQL5|9400|RecQ protein-like 5##AK304168|RECQL5|9400|RecQ protein-like 5##AB042823|RECQL5|9400|RecQ protein-like 5##AB042824|RECQL5|9400|RecQ protein-like 5##AB042825|RECQL5|9400|RecQ protein-like 5##NM_001003715|RECQL5|9400|RecQ protein-like 5##NM_001003716|RECQL5|9400|RecQ protein-like 5##NM_004259|RECQL5|9400|RecQ protein-like 5	0.953516	CTCF.p2:4:0.954
chr18	55789014	55789194	reg1001402.p1	4.082	+	AF385931 NM_001144964	-74647	+	TSC_hg19_v1_chr18_+_55712924 AY243322	-76197	+	DQ890913 DQ893350 AY312514 TSC_hg19_v1_chr18_+_55711911	-77198	+	TSC_hg19_v1_chr18_+_55816551 AY112983 AY112984 DQ181796 NM_001144965 NM_001144968 NM_001144969 NM_001144971 AY112985	27453	+	TSC_hg19_v1_chr18_+_55862636 NM_001144970 AK294963 AY243318 AB007899	73626	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	99658	+	AF385931|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144964|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243322|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112983|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112984|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ181796|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144965|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144968|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144969|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144971|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112985|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.0	
chr19	2562505	2562686	reg1013480.p3	4.082	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-86357	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-105635	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-105659	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	140100	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	140147	-	AK124445 TSC_hg19_v1_chr19_-_2717420	154754	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr2	62534064	62534227	reg1033979.p2	4.082	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-110879	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-401316	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-418359	-	BC047439 AK091902 AX747245 NM_198276	199394	-	AK292545 NM_001142615	366840	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	398821	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr5	81218683	81218844	reg1035315.p2	4.082	+	TSC_hg19_v1_chr5_-_81046990 NM_012446	-171655	-	TSC_hg19_v1_chr5_-_81046929 AB528651 CU677799 DQ891620 DQ894812 EU176592 EU831646 EU831730 AK293544 AK074537 AK294864 AK297494 AF161465 AF077048 AK299858 AK312337 CR936787 AL080076 BC017020	-171864	-	BC075011 BC075010 AK122960 AB078619 BC089437 NM_130767 TSC_hg19_v1_chr5_-_80690052	-528761	-	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	49082	+	AF318326 TSC_hg19_v1_chr5_+_81267992	49227	+	TSC_hg19_v1_chr5_+_81268100 AL136912	49335	+	NM_012446|SSBP2|23635|single-stranded DNA binding protein 2##DQ891620|SSBP2|23635|single-stranded DNA binding protein 2##DQ894812|SSBP2|23635|single-stranded DNA binding protein 2##EU176592|SSBP2|23635|single-stranded DNA binding protein 2##EU831646|SSBP2|23635|single-stranded DNA binding protein 2##EU831730|SSBP2|23635|single-stranded DNA binding protein 2##AK293544|SSBP2|23635|single-stranded DNA binding protein 2##AK074537|SSBP2|23635|single-stranded DNA binding protein 2##AK294864|SSBP2|23635|single-stranded DNA binding protein 2##AK297494|SSBP2|23635|single-stranded DNA binding protein 2##AF161465|SSBP2|23635|single-stranded DNA binding protein 2##AF077048|SSBP2|23635|single-stranded DNA binding protein 2##AK299858|SSBP2|23635|single-stranded DNA binding protein 2##AK312337|SSBP2|23635|single-stranded DNA binding protein 2##CR936787|SSBP2|23635|single-stranded DNA binding protein 2##AL080076|SSBP2|23635|single-stranded DNA binding protein 2##BC017020|SSBP2|23635|single-stranded DNA binding protein 2##BC075011|ACOT12|134526|acyl-CoA thioesterase 12##BC075010|ACOT12|134526|acyl-CoA thioesterase 12##AK122960|ACOT12|134526|acyl-CoA thioesterase 12##AB078619|ACOT12|134526|acyl-CoA thioesterase 12##BC089437|ACOT12|134526|acyl-CoA thioesterase 12##NM_130767|ACOT12|134526|acyl-CoA thioesterase 12##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AF318326|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AL136912|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)	0.528119	CTCF.p2:-101:0.528
chr6	14095633	14095777	reg1032972.p1	4.082	+	NM_001165033 AK090576 AX746519	-170262	+	NM_001165032 NM_152737 TSC_hg19_v1_chr6_+_13925202 AK315528 BC030666 BC050030	-170539	+	NM_001165034	-171029	+	NM_001251901	21781	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	22200	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	22317	+	NM_001165033|RNF182|221687|ring finger protein 182##AK090576|RNF182|221687|ring finger protein 182##NM_001165032|RNF182|221687|ring finger protein 182##NM_152737|RNF182|221687|ring finger protein 182##AK315528|RNF182|221687|ring finger protein 182##BC030666|RNF182|221687|ring finger protein 182##BC050030|RNF182|221687|ring finger protein 182##NM_001165034|RNF182|221687|ring finger protein 182##NM_001251901|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule	0.0	
chr7	100091220	100091356	reg1017558.p2	4.082	+	AK124773 NM_173564	-9739	+	BC001966 BC031622 AK314824 TSC_hg19_v1_chr7_-_100076802 BC002972 BC010406 AK296580 AK297702 AK310800 BC001486 NM_030935	-14461	-	BC031966 NM_001004323	-29395	-	TSC_hg19_v1_chr7_+_100136826 NM_006076 BC009393	45523	+	TSC_hg19_v1_chr7_+_100136847 AK314954 BC017329 AB527774 CU675942	45619	+	NM_001168682	79981	-	AK124773|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_173564|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##BC001966|TSC22D4|81628|TSC22 domain family, member 4##BC031622|TSC22D4|81628|TSC22 domain family, member 4##AK314824|TSC22D4|81628|TSC22 domain family, member 4##BC002972|TSC22D4|81628|TSC22 domain family, member 4##BC010406|TSC22D4|81628|TSC22 domain family, member 4##AK296580|TSC22D4|81628|TSC22 domain family, member 4##AK297702|TSC22D4|81628|TSC22 domain family, member 4##BC001486|TSC22D4|81628|TSC22 domain family, member 4##NM_030935|TSC22D4|81628|TSC22 domain family, member 4##BC031966|C7orf61|402573|chromosome 7 open reading frame 61##NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61##NM_006076|AGFG2|3268|ArfGAP with FG repeats 2##BC009393|AGFG2|3268|ArfGAP with FG repeats 2##AK314954|AGFG2|3268|ArfGAP with FG repeats 2##BC017329|AGFG2|3268|ArfGAP with FG repeats 2##NM_001168682|SAP25|100316904|Sin3A-associated protein, 25kDa	0.0	
chr9	20621454	20621549	reg1026003.p1	4.082	+	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-834550	-	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-1212498	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-1241274	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	947	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	995	-	AK056522 AY139834 NM_017794	36806	+	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797	0.0	
chr1	152469893	152470074	reg1034384.p2	4.081	+	AF077831 AK291301 AK298640 AK316568 BC030807 NM_016190	-83245	-	AY827490 NM_001014342	-137502	-	L01090 NM_002016	-172305	-	NM_178438	13336	+	AJ243662 NM_019060	16994	+	BC131716 NM_178435	69254	-	AF077831|CRNN|49860|cornulin##AK291301|CRNN|49860|cornulin##AK298640|CRNN|49860|cornulin##AK316568|CRNN|49860|cornulin##BC030807|CRNN|49860|cornulin##NM_016190|CRNN|49860|cornulin##AY827490|FLG2|388698|filaggrin family member 2##NM_001014342|FLG2|388698|filaggrin family member 2##L01090|FLG|2312|filaggrin##NM_002016|FLG|2312|filaggrin##NM_178438|LCE5A|254910|late cornified envelope 5A##AJ243662|CRCT1|54544|cysteine-rich C-terminal 1##NM_019060|CRCT1|54544|cysteine-rich C-terminal 1##BC131716|LCE3E|353145|late cornified envelope 3E##NM_178435|LCE3E|353145|late cornified envelope 3E	0.126882	
chr1	243572736	243572857	reg1039026.p1	4.081	+	TSC_hg19_v1_chr1_+_243419405 AK297105 AF250731	-153361	+	BC032454 TSC_hg19_v1_chr1_+_243419371 AK299249	-153425	+	TSC_hg19_v1_chr1_+_243419357 AK299212	-153441	+	AF135794 AB463341 AM392791 AM392849 AJ245709 AF124141 AK308052 BC020479 AF085234 AY005799 BC121154 NM_005465 NM_181690	433731	-	AL117525 NM_001206729	434089	-	TSC_hg19_v1_chr1_+_244214553 NM_205768	641760	+	AK297105|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF250731|SDCCAG8|10806|serologically defined colon cancer antigen 8##BC032454|SDCCAG8|10806|serologically defined colon cancer antigen 8##AK299249|SDCCAG8|10806|serologically defined colon cancer antigen 8##AK299212|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF135794|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392791|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392849|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AJ245709|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF124141|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AK308052|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC020479|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF085234|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AY005799|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC121154|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_005465|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_181690|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AL117525|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_001206729|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_205768|ZNF238|10472|zinc finger protein 238	0.830996	CTCF.p2:5:0.831
chr1	53435837	53435936	reg1028005.p1	4.081	+	TSC_hg19_v1_chr1_+_53393003 BC067108 M75883 CU688252	-42859	+	AK294631 AK295214 AK308105 TSC_hg19_v1_chr1_+_53392957	-42916	+	NM_001007098 NM_001193599 NM_001193600 NM_001193617 NM_002979 TSC_hg19_v1_chr1_+_53392947 AB208789 AK312856	-42962	+	TSC_hg19_v1_chr1_+_53480608 M55421 NM_001007099 NM_001007100 NM_001007250 S52450	44707	+	TSC_hg19_v1_chr1_+_53480624 BC005911 BX537618 BX537619 AK303400	44747	+	NM_001199080 NM_001199082 NM_153703 TSC_hg19_v1_chr1_+_53527759	91855	+	BC067108|SCP2|6342|sterol carrier protein 2##M75883|SCP2|6342|sterol carrier protein 2##AK294631|SCP2|6342|sterol carrier protein 2##AK295214|SCP2|6342|sterol carrier protein 2##AK308105|SCP2|6342|sterol carrier protein 2##NM_001007098|SCP2|6342|sterol carrier protein 2##NM_001193599|SCP2|6342|sterol carrier protein 2##NM_001193600|SCP2|6342|sterol carrier protein 2##NM_001193617|SCP2|6342|sterol carrier protein 2##NM_002979|SCP2|6342|sterol carrier protein 2##AB208789|SCP2|6342|sterol carrier protein 2##AK312856|SCP2|6342|sterol carrier protein 2##M55421|SCP2|6342|sterol carrier protein 2##NM_001007099|SCP2|6342|sterol carrier protein 2##NM_001007100|SCP2|6342|sterol carrier protein 2##NM_001007250|SCP2|6342|sterol carrier protein 2##S52450|SCP2|6342|sterol carrier protein 2##BC005911|SCP2|6342|sterol carrier protein 2##BX537618|SCP2|6342|sterol carrier protein 2##BX537619|SCP2|6342|sterol carrier protein 2##AK303400|SCP2|6342|sterol carrier protein 2##NM_001199080|PODN|127435|podocan##NM_001199082|PODN|127435|podocan##NM_153703|PODN|127435|podocan	0.959705	CTCF.p2:37:0.960
chr17	1973789	1973969	reg1026112.p1	4.081	+	DQ187313 NM_001098202	-14322	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-15481	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-28571	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	232933	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	233161	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	233373	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.0	
chr17	7233053	7233123	reg1037815.p1	4.081	+	TSC_hg19_v1_chr17_-_7232655 AL136870 AB058690 NM_001005408 NM_032442 AL833570	-401	-	TSC_hg19_v1_chr17_-_7218697 AK301877 U28963 BC107738 BC103901 BC103902 BC103903	-14315	-	BT006998 CR541723 CR541750 TSC_hg19_v1_chr17_-_7218639 BC014192 BC013652 NM_004489	-14571	-	NM_014716 TSC_hg19_v1_chr17_+_7239850 D30758 BC018543	6771	+	BC103744 NM_001002914	22119	+	TSC_hg19_v1_chr17_+_7255480 AK056227 AY646650	22454	+	AL136870|NEURL4|84461|neuralized homolog 4 (Drosophila)##AB058690|NEURL4|84461|neuralized homolog 4 (Drosophila)##NM_001005408|NEURL4|84461|neuralized homolog 4 (Drosophila)##NM_032442|NEURL4|84461|neuralized homolog 4 (Drosophila)##AL833570|NEURL4|84461|neuralized homolog 4 (Drosophila)##AK301877|GPS2|2874|G protein pathway suppressor 2##U28963|GPS2|2874|G protein pathway suppressor 2##BC107738|GPS2|2874|G protein pathway suppressor 2##BC103901|GPS2|2874|G protein pathway suppressor 2##BC103902|GPS2|2874|G protein pathway suppressor 2##BC103903|GPS2|2874|G protein pathway suppressor 2##BT006998|GPS2|2874|G protein pathway suppressor 2##CR541723|GPS2|2874|G protein pathway suppressor 2##CR541750|GPS2|2874|G protein pathway suppressor 2##BC014192|GPS2|2874|G protein pathway suppressor 2##BC013652|GPS2|2874|G protein pathway suppressor 2##NM_004489|GPS2|2874|G protein pathway suppressor 2##NM_014716|ACAP1|9744|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1##D30758|ACAP1|9744|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1##BC018543|ACAP1|9744|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1##BC103744|KCTD11|147040|potassium channel tetramerisation domain containing 11##NM_001002914|KCTD11|147040|potassium channel tetramerisation domain containing 11##AK056227|KCTD11|147040|potassium channel tetramerisation domain containing 11##AY646650|KCTD11|147040|potassium channel tetramerisation domain containing 11	0.0	
chr17	76777343	76777465	reg1034730.p1	4.081	+	TSC_hg19_v1_chr17_-_76732958 AK311535	-44406	-	TSC_hg19_v1_chr17_-_76719676 AK293894	-57653	-	AK316277 TSC_hg19_v1_chr17_-_76719649	-57757	-	AB590939 EU832306 EU832390 BC050452 BC038385 TSC_hg19_v1_chr17_-_76778380 AK296914 AK307917 M85169 NM_004762 NM_017456	949	-	BC071582 TSC_hg19_v1_chr17_-_76836610	59246	-	TSC_hg19_v1_chr17_-_76836843 AK225426	59379	-	AK293894|CYTH1|9267|cytohesin 1##AK316277|CYTH1|9267|cytohesin 1##EU832306|CYTH1|9267|cytohesin 1##EU832390|CYTH1|9267|cytohesin 1##BC050452|CYTH1|9267|cytohesin 1##BC038385|CYTH1|9267|cytohesin 1##AK296914|CYTH1|9267|cytohesin 1##AK307917|CYTH1|9267|cytohesin 1##M85169|CYTH1|9267|cytohesin 1##NM_004762|CYTH1|9267|cytohesin 1##NM_017456|CYTH1|9267|cytohesin 1##BC071582|USP36|57602|ubiquitin specific peptidase 36##AK225426|USP36|57602|ubiquitin specific peptidase 36	0.0	
chr18	47955599	47955710	reg1033395.p2	4.081	+	TSC_hg19_v1_chr18_+_47901415 NM_001039535 NM_145060 BC015706 AK313968 AK303464	-54257	+	BX647189 NM_001101654 NM_014593	-140963	-	AB031069 AF149758 AK314886 TSC_hg19_v1_chr18_-_47814205 AK294645	-141447	-	TSC_hg19_v1_chr18_+_48086463 BC050299 NM_002747 AK293818 BC040493 AK295058	130843	+	AB042647 AK054702 AK295666 NM_001127175 NM_001127176 NM_031939	390711	-	BC029860 NM_001127174	396088	-	NM_001039535|SKA1|220134|spindle and kinetochore associated complex subunit 1##NM_145060|SKA1|220134|spindle and kinetochore associated complex subunit 1##BC015706|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK313968|SKA1|220134|spindle and kinetochore associated complex subunit 1##AK303464|SKA1|220134|spindle and kinetochore associated complex subunit 1##BX647189|CXXC1|30827|CXXC finger protein 1##NM_001101654|CXXC1|30827|CXXC finger protein 1##NM_014593|CXXC1|30827|CXXC finger protein 1##AB031069|CXXC1|30827|CXXC finger protein 1##AF149758|CXXC1|30827|CXXC finger protein 1##AK314886|CXXC1|30827|CXXC finger protein 1##AK294645|CXXC1|30827|CXXC finger protein 1##BC050299|MAPK4|5596|mitogen-activated protein kinase 4##NM_002747|MAPK4|5596|mitogen-activated protein kinase 4##AK293818|MAPK4|5596|mitogen-activated protein kinase 4##BC040493|MAPK4|5596|mitogen-activated protein kinase 4##AK295058|MAPK4|5596|mitogen-activated protein kinase 4##AB042647|MRO|83876|maestro##AK054702|MRO|83876|maestro##AK295666|MRO|83876|maestro##NM_001127175|MRO|83876|maestro##NM_001127176|MRO|83876|maestro##NM_031939|MRO|83876|maestro##BC029860|MRO|83876|maestro##NM_001127174|MRO|83876|maestro	0.999608	CTCF.p2:0:1.000
chr18	72676108	72676289	reg1004673.p2	4.081	+	NM_001146189 NM_001146190 NM_017757	-333280	+	TSC_hg19_v1_chr18_+_72265126 AK056288	-411067	+	TSC_hg19_v1_chr18_-_72265072 BC036588	-411138	-	TSC_hg19_v1_chr18_-_72920993 CU687330 CU689738	244803	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	244914	-	BC018081 NM_175907 TSC_hg19_v1_chr18_-_72921324	245107	-	NM_001146189|ZNF407|55628|zinc finger protein 407##NM_001146190|ZNF407|55628|zinc finger protein 407##NM_017757|ZNF407|55628|zinc finger protein 407##AK056288|ZNF407|55628|zinc finger protein 407##BC036588|LOC400657|400657|uncharacterized LOC400657##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	0.0	
chr22	46646176	46646323	reg1031134.p1	4.081	+	TSC_hg19_v1_chr22_-_46646191 BC036462 BC067871 NM_207327 BX648331	-41	-	TSC_hg19_v1_chr22_+_46546708 AK289821	-99539	+	NM_001001928 NM_005036 AY258330 TSC_hg19_v1_chr22_+_46546555 AY258328	-99719	+	TSC_hg19_v1_chr22_+_46646292 AK091355	52	+	AF116458 NM_006071 BC027601	12985	-	TSC_hg19_v1_chr22_+_46663880 NM_017931 AK300606	17609	+	BC036462|C22orf40|150383|chromosome 22 open reading frame 40##BC067871|C22orf40|150383|chromosome 22 open reading frame 40##NM_207327|C22orf40|150383|chromosome 22 open reading frame 40##BX648331|C22orf40|150383|chromosome 22 open reading frame 40##AK289821|PPARA|5465|peroxisome proliferator-activated receptor alpha##NM_001001928|PPARA|5465|peroxisome proliferator-activated receptor alpha##NM_005036|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258330|PPARA|5465|peroxisome proliferator-activated receptor alpha##AY258328|PPARA|5465|peroxisome proliferator-activated receptor alpha##AK091355|LOC284926|284926|uncharacterized LOC284926##AF116458|PKDREJ|10343|polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)##NM_006071|PKDREJ|10343|polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)##BC027601|PKDREJ|10343|polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)##NM_017931|TTC38|55020|tetratricopeptide repeat domain 38##AK300606|TTC38|55020|tetratricopeptide repeat domain 38	0.0	
chr3	45743152	45743224	reg1032537.p2	4.081	+	TSC_hg19_v1_chr3_+_45730926 BC016559 AL136831 AK296421 AM393061 CU677647	-12253	+	TSC_hg19_v1_chr3_+_45730887 AB020658 AK301248	-12299	+	TSC_hg19_v1_chr3_+_45730846 AK291142	-12331	+	AF075260 HQ258580 AJ276207 AJ276208 BC126197 BC136431 BC144087 TSC_hg19_v1_chr3_-_45838004	94770	-	BC036073 TSC_hg19_v1_chr3_-_45838029 NM_020208 NM_022405	94842	-	TSC_hg19_v1_chr3_-_45838112 AF125107	94960	-	BC016559|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AL136831|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK296421|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AM393061|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AB020658|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK301248|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AK291142|SACM1L|22908|SAC1 suppressor of actin mutations 1-like (yeast)##AF075260|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##HQ258580|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##AJ276207|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##AJ276208|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC126197|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC136431|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC144087|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC036073|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_020208|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_022405|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20	0.0	
chr4	151749542	151749670	reg1025598.p2	4.081	+	NM_006439	-246530	+	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	-750081	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-2386022	-	TSC_hg19_v1_chr4_-_151770612 AB208838	21043	-	TSC_hg19_v1_chr4_-_151773972 BC172218	24388	-	TSC_hg19_v1_chr4_-_151936437 AF467287 NM_001199282 BC064834	186812	-	NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##AF467287|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_001199282|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##BC064834|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.214469	
chr8	19266181	19266357	reg1008943.p2	4.081	+	TSC_hg19_v1_chr8_+_19171505 NM_001174160 NM_022071 AK024799 AK293301 BC082982 NM_001174159	-94986	+	TSC_hg19_v1_chr8_-_18871214 AK091317 AX746913 NM_015310	-394983	-	GU727648 TSC_hg19_v1_chr8_-_18871128	-395157	-	BX649103 NM_001130518	193761	-	AY358441 NM_018371	273824	-	AK314625 TSC_hg19_v1_chr8_-_19615422	349148	-	NM_001174160|SH2D4A|63898|SH2 domain containing 4A##NM_022071|SH2D4A|63898|SH2 domain containing 4A##AK024799|SH2D4A|63898|SH2 domain containing 4A##AK293301|SH2D4A|63898|SH2 domain containing 4A##BC082982|SH2D4A|63898|SH2 domain containing 4A##NM_001174159|SH2D4A|63898|SH2 domain containing 4A##AK091317|PSD3|23362|pleckstrin and Sec7 domain containing 3##NM_015310|PSD3|23362|pleckstrin and Sec7 domain containing 3##GU727648|PSD3|23362|pleckstrin and Sec7 domain containing 3##BX649103|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_001130518|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AY358441|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##NM_018371|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1##AK314625|CSGALNACT1|55790|chondroitin sulfate N-acetylgalactosaminyltransferase 1	0.0	
chr9	39663162	39663270	reg1037011.p2	4.081	+	AK302569 NM_001040065 NM_001085452 BC146855	-307531	+	AB385498 AK294281 AB051501 BC132737 BC144130 AK056833 NM_033655	-375036	-	TSC_hg19_v1_chr9_-_38620602 BC056266	-1042593	-	AK302569 NM_001040065 NM_001085452 BC146855	221745	+	NM_001083124	1037074	+	AK057375 AK292150 NM_033160	1128870	-	AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##AK294281|CNTNAP3|79937|contactin associated protein-like 3##AB051501|CNTNAP3|79937|contactin associated protein-like 3##BC132737|CNTNAP3|79937|contactin associated protein-like 3##BC144130|CNTNAP3|79937|contactin associated protein-like 3##AK056833|CNTNAP3|79937|contactin associated protein-like 3##NM_033655|CNTNAP3|79937|contactin associated protein-like 3##BC056266|ANKRD18A|253650|ankyrin repeat domain 18A##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001083124|FAM75A3|727830|family with sequence similarity 75, member A3##AK057375|ZNF658|26149|zinc finger protein 658##AK292150|ZNF658|26149|zinc finger protein 658##NM_033160|ZNF658|26149|zinc finger protein 658	0.99804	CTCF.p2:-7:0.998
chr10	113041398	113041511	reg1036893.p1	4.080	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	-204602	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-362074	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-362094	+	AB046780 TSC_hg19_v1_chr10_-_113933602	892107	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	902051	-	BC113497 BC113499 AF312827 HQ258194 NM_058222	1001998	+	NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta	0.736535	CTCF.p2:18:0.737
chr11	54954765	54954869	reg1033474.p2	4.080	+	NM_001004703	-3439536	+	BC140750 NM_001005272	-3542370	-	BC136850 BC136851 NM_001005270	-4950747	-	AF521869 BC001862 NM_024114	74840	+	BC140748 NM_001005274	155834	+	NM_001005275	180542	+	NM_001004703|OR4C46|119749|olfactory receptor, family 4, subfamily C, member 46##BC140750|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##NM_001005272|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##BC136850|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC136851|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##NM_001005270|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##AF521869|TRIM48|79097|tripartite motif containing 48##BC001862|TRIM48|79097|tripartite motif containing 48##NM_024114|TRIM48|79097|tripartite motif containing 48##BC140748|OR4A16|81327|olfactory receptor, family 4, subfamily A, member 16##NM_001005274|OR4A16|81327|olfactory receptor, family 4, subfamily A, member 16##NM_001005275|OR4A15|81328|olfactory receptor, family 4, subfamily A, member 15	0.0	
chr14	105714619	105714795	reg1032731.p2	4.080	+	AJ297407 NM_145685	-486	-	TSC_hg19_v1_chr14_-_105647650 AB087802 HQ257983 BC041584 AK128196 AK310449 NM_177533	-67113	-	TSC_hg19_v1_chr14_-_105635114 AF029778 AF029779 NM_002226 NM_145159	-79570	-	TSC_hg19_v1_chr14_+_105714874 NM_033271	158	+	TSC_hg19_v1_chr14_+_105714895 BC042525	242	+	AK096471 NM_001242789	1033	-	AJ297407|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_145685|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##AB087802|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##HQ257983|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##BC041584|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AK128196|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##NM_177533|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AF029778|JAG2|3714|jagged 2##AF029779|JAG2|3714|jagged 2##NM_002226|JAG2|3714|jagged 2##NM_145159|JAG2|3714|jagged 2##NM_033271|BTBD6|90135|BTB (POZ) domain containing 6##BC042525|BTBD6|90135|BTB (POZ) domain containing 6##AK096471|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_001242789|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)	0.0	
chr16	3541168	3541242	reg1029434.p1	4.080	+	AK095819 TSC_hg19_v1_chr16_+_3533613	-7659	+	TSC_hg19_v1_chr16_+_3508044 NM_001083600 NM_024845 AK092005 AK298566 AK024216 AK130792 AK225178 AK311524 AY358543 AK302361	-33060	+	TSC_hg19_v1_chr16_+_3493690 NM_001083601 AK297219 AL833594	-47523	+	NM_001080524	4215	-	TSC_hg19_v1_chr16_+_3551003 AB089691 NM_015041 BC017070 AB014543 AB527560	9786	+	AK023359 NM_024793	18688	+	AK095819|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##NM_001083600|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##NM_024845|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK092005|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK298566|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK024216|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK130792|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK225178|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK311524|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AY358543|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK302361|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##NM_001083601|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AK297219|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##AL833594|NAA60|79903|N(alpha)-acetyltransferase 60, NatF catalytic subunit##NM_001080524|C16orf90|646174|chromosome 16 open reading frame 90##AB089691|CLUAP1|23059|clusterin associated protein 1##NM_015041|CLUAP1|23059|clusterin associated protein 1##BC017070|CLUAP1|23059|clusterin associated protein 1##AB014543|CLUAP1|23059|clusterin associated protein 1##AK023359|CLUAP1|23059|clusterin associated protein 1##NM_024793|CLUAP1|23059|clusterin associated protein 1	0.547774	CTCF.p2:-10:0.548
chr20	62482382	62482516	reg1032215.p2	4.080	+	TSC_hg19_v1_chr20_-_62462618 BC052269 BC073800	-19852	-	AK131482 NM_025224	-45594	-	TSC_hg19_v1_chr20_+_62372460 AK298304 BC017446	-109929	+	NM_080622	10116	+	NM_001243891 NM_001243892 NM_001243894 NM_001243895 NM_003288 NM_199359 NM_199360 NM_199361 NM_199362 NM_199363 TSC_hg19_v1_chr20_+_62496622 AK298366 AK055068 AK297064 AK314501	14154	+	TSC_hg19_v1_chr20_+_62496638 AF004430	14191	+	BC052269|ZBTB46|140685|zinc finger and BTB domain containing 46##BC073800|ZBTB46|140685|zinc finger and BTB domain containing 46##AK131482|ZBTB46|140685|zinc finger and BTB domain containing 46##NM_025224|ZBTB46|140685|zinc finger and BTB domain containing 46##AK298304|SLC2A4RG|56731|SLC2A4 regulator##BC017446|SLC2A4RG|56731|SLC2A4 regulator##NM_080622|ABHD16B|140701|abhydrolase domain containing 16B##NM_001243891|TPD52L2|7165|tumor protein D52-like 2##NM_001243892|TPD52L2|7165|tumor protein D52-like 2##NM_001243894|TPD52L2|7165|tumor protein D52-like 2##NM_001243895|TPD52L2|7165|tumor protein D52-like 2##NM_003288|TPD52L2|7165|tumor protein D52-like 2##NM_199359|TPD52L2|7165|tumor protein D52-like 2##NM_199360|TPD52L2|7165|tumor protein D52-like 2##NM_199361|TPD52L2|7165|tumor protein D52-like 2##NM_199362|TPD52L2|7165|tumor protein D52-like 2##NM_199363|TPD52L2|7165|tumor protein D52-like 2##AK298366|TPD52L2|7165|tumor protein D52-like 2##AK055068|TPD52L2|7165|tumor protein D52-like 2##AK297064|TPD52L2|7165|tumor protein D52-like 2##AK314501|TPD52L2|7165|tumor protein D52-like 2##AF004430|TPD52L2|7165|tumor protein D52-like 2	0.0	
chr2	115309041	115309131	reg1026645.p1	4.080	+	AK055256 BC038514 NM_001178036	-89920	+	BC030832 NM_020868	-109188	+	AB209353 TSC_hg19_v1_chr2_+_114674521	-634573	+	NM_001178037 DQ857321	513204	+	NM_001178034 DQ857322 AK296490 NM_001004360 AY387785 AB040925 AB385475 DQ857323	610575	+	NM_006773 TSC_hg19_v1_chr2_+_118572276 BC024739	3263182	+	AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##BC030832|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_020868|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AB209353|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##NM_001178037|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857321|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178034|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857322|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK296490|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001004360|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AY387785|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AB040925|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857323|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_006773|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC024739|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	0.221333	CTCF.p2:5:0.221
chr22	44477344	44477510	reg1009632.p2	4.080	+	BC039811 NM_001243385	-12431	+	AK308443 NM_001243386	-55244	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	-57228	+	NM_001137605 AK309348 AK293360	91429	+	NM_022141 AK225929 AK307294 BC034406 AF237772	99385	+	AK307299 TSC_hg19_v1_chr22_+_44577227 AK311264	99797	+	BC039811|PARVB|29780|parvin, beta##NM_001243385|PARVB|29780|parvin, beta##AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##NM_001137605|PARVG|64098|parvin, gamma##AK309348|PARVG|64098|parvin, gamma##AK293360|PARVG|64098|parvin, gamma##NM_022141|PARVG|64098|parvin, gamma##AK225929|PARVG|64098|parvin, gamma##AK307294|PARVG|64098|parvin, gamma##BC034406|PARVG|64098|parvin, gamma##AF237772|PARVG|64098|parvin, gamma##AK307299|PARVG|64098|parvin, gamma	0.0	
chr3	192611101	192611273	reg1024647.p2	4.080	+	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	-165822	-	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-484344	-	AY858112 NM_001083308	-1432236	+	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	24449	-	BC036194 BC045582 NM_178496	24754	-	TSC_hg19_v1_chr3_+_192958897 BC048095 NM_020386	347717	+	AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2##BC048095|HRASLS|57110|HRAS-like suppressor##NM_020386|HRASLS|57110|HRAS-like suppressor	0.0	
chr4	154464098	154464245	reg1036904.p2	4.080	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-76679	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-198296	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-198384	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	141227	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	141259	+	TSC_hg19_v1_chr4_+_154605441 BC033756	141293	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.0	
chr4	163969853	163969972	reg1008689.p2	4.080	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	-884761	-	AK294459 NM_014247	-3780915	+	AK058100 NM_152543	-4013580	-	TSC_hg19_v1_chr4_-_164088002 AK097352	118080	-	TSC_hg19_v1_chr4_-_164088043 AK308601	118125	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	118166	-	AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.0	
chr5	5046566	5046673	reg1032255.p1	4.080	+	AY335938 NM_024337	-1450452	+	AY249325 NM_178569 BC101608 BC101634 BC143638 BC143639 BC143640 BC171731	-2294318	+	AB188492 NM_001134222 NM_033267 BC065189	-2294848	-	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	93892	+	TSC_hg19_v1_chr5_+_5422777 AK126937	376156	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	376290	+	AY335938|IRX1|79192|iroquois homeobox 1##NM_024337|IRX1|79192|iroquois homeobox 1##AY249325|C5orf38|153571|chromosome 5 open reading frame 38##NM_178569|C5orf38|153571|chromosome 5 open reading frame 38##BC101608|C5orf38|153571|chromosome 5 open reading frame 38##BC101634|C5orf38|153571|chromosome 5 open reading frame 38##BC143638|C5orf38|153571|chromosome 5 open reading frame 38##BC143639|C5orf38|153571|chromosome 5 open reading frame 38##BC143640|C5orf38|153571|chromosome 5 open reading frame 38##BC171731|C5orf38|153571|chromosome 5 open reading frame 38##AB188492|IRX2|153572|iroquois homeobox 2##NM_001134222|IRX2|153572|iroquois homeobox 2##NM_033267|IRX2|153572|iroquois homeobox 2##BC065189|IRX2|153572|iroquois homeobox 2##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947	0.0	
chr5	59503036	59503133	reg1031777.p2	4.080	+	NM_001104631	-313464	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	-438629	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	-438736	-	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	280820	-	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	280956	+	TSC_hg19_v1_chr5_-_59995928 AF490257	492832	-	NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AF490257|DEPDC1B|55789|DEP domain containing 1B	0.0	
chr6	37129061	37129157	reg1031474.p2	4.080	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-155608	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-174839	-	AK022783 TSC_hg19_v1_chr6_-_36953950 AF176006 AF192559 BC125055 BC153873 NM_014341 BC110914	-175132	-	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	9013	+	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	96277	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	96490	+	BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##AK022783|MTCH1|23787|mitochondrial carrier 1##AF176006|MTCH1|23787|mitochondrial carrier 1##AF192559|MTCH1|23787|mitochondrial carrier 1##BC125055|MTCH1|23787|mitochondrial carrier 1##BC153873|MTCH1|23787|mitochondrial carrier 1##NM_014341|MTCH1|23787|mitochondrial carrier 1##BC110914|MTCH1|23787|mitochondrial carrier 1##NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B	0.0	
chr6	41302114	41302198	reg1022796.p2	4.080	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-47732	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-106088	+	AF534824 AK023755 BC125078 BC125079 AY358171 NM_024807	-133233	-	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	1410	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	212003	+	TSC_hg19_v1_chr6_+_41514342 BC052803	212181	+	DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##AF534824|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AK023755|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125078|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125079|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AY358171|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_024807|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4	0.0	
chr6	7723587	7723760	reg1007695.p2	4.080	+	TSC_hg19_v1_chr6_+_7590453 AL832462 NM_152551 AK292409 AK056796 BC054008 BC114631 BC114630 BC062458	-133214	+	TSC_hg19_v1_chr6_+_7579692 J05211	-143936	+	TSC_hg19_v1_chr6_+_7541904 AB621818 AK304182	-181743	+	TSC_hg19_v1_chr6_+_7726328 AK300628	2719	+	NM_001718 M60315 BC096084 BC096085 BC099624 BC099625 BC111763 BC112352 BC113018 BC113019 BC128031	3377	+	TSC_hg19_v1_chr6_-_7910300 AK315598 NM_001145549	186656	-	AL832462|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##NM_152551|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##AK292409|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##AK056796|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC054008|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC114631|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC114630|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##BC062458|SNRNP48|154007|small nuclear ribonucleoprotein 48kDa (U11/U12)##J05211|DSP|1832|desmoplakin##AK304182|DSP|1832|desmoplakin##AK300628|BMP6|654|bone morphogenetic protein 6##NM_001718|BMP6|654|bone morphogenetic protein 6##M60315|BMP6|654|bone morphogenetic protein 6##BC096084|BMP6|654|bone morphogenetic protein 6##BC096085|BMP6|654|bone morphogenetic protein 6##BC099624|BMP6|654|bone morphogenetic protein 6##BC099625|BMP6|654|bone morphogenetic protein 6##BC111763|BMP6|654|bone morphogenetic protein 6##BC112352|BMP6|654|bone morphogenetic protein 6##BC113018|BMP6|654|bone morphogenetic protein 6##BC113019|BMP6|654|bone morphogenetic protein 6##BC128031|BMP6|654|bone morphogenetic protein 6##AK315598|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)##NM_001145549|TXNDC5|81567|thioredoxin domain containing 5 (endoplasmic reticulum)	0.0	
chr7	41771870	41772016	reg1027662.p2	4.080	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-29258	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1597334	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1597412	+	NM_000168	504674	-	TSC_hg19_v1_chr7_-_42276797 AK308429	504852	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	1179646	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.99509	CTCF.p2:32:0.995
chr8	126620701	126620815	reg1028525.p2	4.080	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-178179	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-516661	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-516701	-	TSC_hg19_v1_chr8_-_126963395 BX648371	342655	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	949797	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	949966	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.0	
chr9	136647580	136647735	reg1004092.p2	4.080	+	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-42671	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-44179	-	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-146149	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	209789	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	285536	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	285969	-	BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3	0.0	
chrX	11522527	11522643	reg1029453.p2	4.080	+	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	-211043	+	AF177663 NM_013423 AK297713	-238477	-	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	-393116	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	161235	-	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	253758	+	NM_001193270 AK300814	254132	+	AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase##AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	0.949769	CTCF.p2:8:0.916
chr10	105004418	105004486	reg1000443.p1	4.079	+	BX648078 TSC_hg19_v1_chr10_-_104953030 BC001595 AK127670 AK291667 AK312517 D38524 NM_001134373 NM_012229	-51405	-	TSC_hg19_v1_chr10_+_104678078 BC021222 AK023479 NM_017649 NM_199076 NM_199077	-326395	+	NM_020682 AK057833 AK225972 AF226730 AK309737 BC119637 BC119638	-375195	+	BC157875 BC171885 NM_001143909 BC137242 BC137243 BC157829 BC171806	1221	+	TSC_hg19_v1_chr10_+_105036894 BC006359 NM_032727 S78296 DQ892733 DQ895980	32421	+	TSC_hg19_v1_chr10_+_105037444 AB209785	33002	+	BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II##BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II##AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II##AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II##AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II##D38524|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II##BC021222|CNNM2|54805|cyclin M2##AK023479|CNNM2|54805|cyclin M2##NM_017649|CNNM2|54805|cyclin M2##NM_199076|CNNM2|54805|cyclin M2##NM_199077|CNNM2|54805|cyclin M2##NM_020682|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK057833|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK225972|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AF226730|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK309737|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119637|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119638|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC157875|LOC729020|729020|rcRPE##BC171885|LOC729020|729020|rcRPE##NM_001143909|LOC729020|729020|rcRPE##BC137242|LOC729020|729020|rcRPE##BC137243|LOC729020|729020|rcRPE##BC157829|LOC729020|729020|rcRPE##BC171806|LOC729020|729020|rcRPE##BC006359|INA|9118|internexin neuronal intermediate filament protein, alpha##NM_032727|INA|9118|internexin neuronal intermediate filament protein, alpha##S78296|INA|9118|internexin neuronal intermediate filament protein, alpha##DQ892733|INA|9118|internexin neuronal intermediate filament protein, alpha##DQ895980|INA|9118|internexin neuronal intermediate filament protein, alpha##AB209785|INA|9118|internexin neuronal intermediate filament protein, alpha	0.0	
chr1	43693207	43693388	reg1003562.p2	4.079	+	TSC_hg19_v1_chr1_-_43637988 AK299476 AK295006 NM_006824 AB590504 NM_001159936	-55193	-	NM_001167965 NM_001195831 NM_152498 AK056562 TSC_hg19_v1_chr1_+_43638044 BC117280 BC117306 BC143804	-55251	+	TSC_hg19_v1_chr1_-_43637958 AK223455	-55335	-	NM_144626 BC072393	42382	+	TSC_hg19_v1_chr1_-_43736601 BC073924	43306	-	BC041633 NM_182517 NM_001164829	57965	-	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2##AK295006|EBNA1BP2|10969|EBNA1 binding protein 2##NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2##NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2##NM_001167965|WDR65|149465|WD repeat domain 65##NM_001195831|WDR65|149465|WD repeat domain 65##NM_152498|WDR65|149465|WD repeat domain 65##AK056562|WDR65|149465|WD repeat domain 65##BC117280|WDR65|149465|WD repeat domain 65##BC117306|WDR65|149465|WD repeat domain 65##BC143804|WDR65|149465|WD repeat domain 65##AK223455|EBNA1BP2|10969|EBNA1 binding protein 2##NM_144626|TMEM125|128218|transmembrane protein 125##BC072393|TMEM125|128218|transmembrane protein 125##BC073924|EBNA1BP2|10969|EBNA1 binding protein 2##BC041633|C1orf210|149466|chromosome 1 open reading frame 210##NM_182517|C1orf210|149466|chromosome 1 open reading frame 210##NM_001164829|C1orf210|149466|chromosome 1 open reading frame 210	0.0	
chr15	91240421	91240506	reg1029348.p1	4.079	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-167267	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-308924	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-308957	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	20151	+	NM_002569 X17094	171421	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	187238	+	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene	0.0	
chr17	42462957	42463113	reg1034602.p1	4.079	+	TSC_hg19_v1_chr17_-_42441222 BC030200 NM_198475	-21813	-	TSC_hg19_v1_chr17_+_42422669 AK000607 AK222522 AK296090 X62320 AK303830	-40359	+	TSC_hg19_v1_chr17_+_42422640 AF055008	-40398	+	AB528003 J02764 BC117443 BC126442 AK297155 AK315335 M34480 NM_000419	3821	-	TSC_hg19_v1_chr17_-_42580760 BC136629 BC144323 AK025600 BC140010	117729	-	TSC_hg19_v1_chr17_-_42580958 NM_001002909	117937	-	BC030200|FAM171A2|284069|family with sequence similarity 171, member A2##NM_198475|FAM171A2|284069|family with sequence similarity 171, member A2##AK000607|GRN|2896|granulin##AK222522|GRN|2896|granulin##AK296090|GRN|2896|granulin##X62320|GRN|2896|granulin##AK303830|GRN|2896|granulin##AF055008|GRN|2896|granulin##J02764|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC117443|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC126442|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK297155|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK315335|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##M34480|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##NM_000419|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC136629|GPATCH8|23131|G patch domain containing 8##BC144323|GPATCH8|23131|G patch domain containing 8##AK025600|GPATCH8|23131|G patch domain containing 8##BC140010|GPATCH8|23131|G patch domain containing 8##NM_001002909|GPATCH8|23131|G patch domain containing 8	0.085207	
chr2	113563169	113563251	reg1033593.p1	4.079	+	NM_000575 BC035169	-20238	-	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	-40988	-	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	-159690	+	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	31134	-	AF167368 AF200496 NM_014439 NM_173202 NM_173203 NM_173204 BC020637 AB451333 AB451478 AB590279 AF251119 AF251120 AY071840 AY071841 CU676594 DQ891388	107358	+	AF201832 NM_173205	109559	+	NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta##AF167368|IL37|27178|interleukin 37##AF200496|IL37|27178|interleukin 37##NM_014439|IL37|27178|interleukin 37##NM_173202|IL37|27178|interleukin 37##NM_173203|IL37|27178|interleukin 37##NM_173204|IL37|27178|interleukin 37##BC020637|IL37|27178|interleukin 37##AB451333|IL37|27178|interleukin 37##AB451478|IL37|27178|interleukin 37##AF251119|IL37|27178|interleukin 37##AF251120|IL37|27178|interleukin 37##AY071840|IL37|27178|interleukin 37##AY071841|IL37|27178|interleukin 37##DQ891388|IL37|27178|interleukin 37##AF201832|IL37|27178|interleukin 37##NM_173205|IL37|27178|interleukin 37	0.0	
chr3	193688118	193688201	reg1031629.p1	4.079	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-376994	+	TSC_hg19_v1_chr3_+_193311006 BC043443 BC075805 AB011139	-377092	+	TSC_hg19_v1_chr3_+_193310928 NM_015560 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837	-377204	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	165774	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	165796	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	383915	-	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)##BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)##AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2	0.0	
chr5	169706065	169706246	reg1032428.p2	4.079	+	BC030767 NM_001102609 BC092511	-46159	+	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	-173184	+	AK055998 NM_001129891	-298412	-	BT007273 FN432830 DQ890681 DQ893863 AB527802 TSC_hg19_v1_chr5_-_169724688	18496	-	TSC_hg19_v1_chr5_-_169724734 BC016618 AK310369	18600	-	AK292890 TSC_hg19_v1_chr5_-_169724784 AK300000	18643	-	BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##BT007273|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##FN432830|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ890681|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ893863|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK292890|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK300000|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	0.0	
chr9	125865089	125865182	reg1032924.p2	4.079	+	AB384939 BC066885 BC066886 BC067532 BC067533 BC067534 CU688178 NM_005294	-68290	+	AK294531 AK299686 TSC_hg19_v1_chr9_+_125795928 AK313539	-69268	+	AK131449 TSC_hg19_v1_chr9_+_125703299 BC020609 NM_012197 AK022408 BC054492 AF161357 AJ011679	-161907	+	TSC_hg19_v1_chr9_-_125874882 AK025814	9764	-	TSC_hg19_v1_chr9_-_125941308 BC002693	76185	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	165685	-	BC066885|GPR21|2844|G protein-coupled receptor 21##BC066886|GPR21|2844|G protein-coupled receptor 21##BC067532|GPR21|2844|G protein-coupled receptor 21##BC067533|GPR21|2844|G protein-coupled receptor 21##BC067534|GPR21|2844|G protein-coupled receptor 21##NM_005294|GPR21|2844|G protein-coupled receptor 21##AK294531|RABGAP1|23637|RAB GTPase activating protein 1##AK299686|GPR21|2844|G protein-coupled receptor 21##AK313539|GPR21|2844|G protein-coupled receptor 21##AK131449|RABGAP1|23637|RAB GTPase activating protein 1##BC020609|RABGAP1|23637|RAB GTPase activating protein 1##NM_012197|RABGAP1|23637|RAB GTPase activating protein 1##AK022408|RABGAP1|23637|RAB GTPase activating protein 1##BC054492|RABGAP1|23637|RAB GTPase activating protein 1##AF161357|RABGAP1|23637|RAB GTPase activating protein 1##AJ011679|RABGAP1|23637|RAB GTPase activating protein 1##AK025814|MIR600HG|81571|MIR600 host gene (non-protein coding)##BC002693|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein	0.597128	CTCF.p2:-6:0.597
chr10	52650803	52650952	reg1033287.p1	4.078	+	TSC_hg19_v1_chr10_-_52645440 BC054873 AK000324 NM_001198818 NM_001198819 NM_001198820 NM_014576 NM_138932 NM_138933	-5442	-	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	-5484	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	-151167	+	TSC_hg19_v1_chr10_+_52750904 NM_001098512	100030	+	TSC_hg19_v1_chr10_+_52750944 AK300110	100063	+	TSC_hg19_v1_chr10_+_52751129 D45864	100244	+	BC054873|A1CF|29974|APOBEC1 complementation factor##AK000324|A1CF|29974|APOBEC1 complementation factor##NM_001198818|A1CF|29974|APOBEC1 complementation factor##NM_001198819|A1CF|29974|APOBEC1 complementation factor##NM_001198820|A1CF|29974|APOBEC1 complementation factor##NM_014576|A1CF|29974|APOBEC1 complementation factor##NM_138932|A1CF|29974|APOBEC1 complementation factor##NM_138933|A1CF|29974|APOBEC1 complementation factor##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK300110|PRKG1|5592|protein kinase, cGMP-dependent, type I##D45864|PRKG1|5592|protein kinase, cGMP-dependent, type I	0.60986	CTCF.p2:4:0.610
chr14	103174979	103175123	reg1034476.p1	4.078	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-115890	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	-116053	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-198937	-	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	68768	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	68849	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	213947	+	AF155595|RCOR1|23186|REST corepressor 1##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)	0.0	
chr15	76483642	76483822	reg1011195.p2	4.078	+	TSC_hg19_v1_chr15_+_76352323 AK056777 AK308676	-131403	+	TSC_hg19_v1_chr15_+_76352281 AK095509 NM_152335	-131443	+	AK311204 TSC_hg19_v1_chr15_-_76352131	-131630	-	BT009796 J04058 TSC_hg19_v1_chr15_-_76603737 AB529049 BC095457	120000	-	TSC_hg19_v1_chr15_-_76603771 AK300044 BC015526 D28380	120033	-	TSC_hg19_v1_chr15_-_76603791 BC029995	120065	-	AK308676|C15orf27|123591|chromosome 15 open reading frame 27##AK095509|C15orf27|123591|chromosome 15 open reading frame 27##NM_152335|C15orf27|123591|chromosome 15 open reading frame 27##AK311204|NRG4|145957|neuregulin 4##BT009796|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##J04058|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC095457|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##AK300044|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC015526|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide##BC029995|ETFA|2108|electron-transfer-flavoprotein, alpha polypeptide	0.519644	CTCF.p2:77:0.520
chr21	45616148	45616286	reg1024889.p1	4.078	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-62656	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-62712	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-88918	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	44549	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	44640	-	AF194032 NM_013369 NM_175867	65881	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr2	15728585	15728717	reg1033143.p1	4.078	+	TSC_hg19_v1_chr2_-_15701451 BC108693 AF388385 BC131735 NM_015909 AB621813	-27193	-	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	-27222	-	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	-955800	+	NM_004939 X70649	3118	+	TSC_hg19_v1_chr2_+_15732004 AB593034 AB593033 AB593031 AK297432 AK298426 BC053673 BC012132 AB593032 AK298212 BC012739 AK313933 EF418570 EF418571 AB527788	3374	+	M55330 TSC_hg19_v1_chr2_+_16080569	351913	+	BC108693|NBAS|51594|neuroblastoma amplified sequence##AF388385|NBAS|51594|neuroblastoma amplified sequence##BC131735|NBAS|51594|neuroblastoma amplified sequence##NM_015909|NBAS|51594|neuroblastoma amplified sequence##AB621813|NBAS|51594|neuroblastoma amplified sequence##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##NM_004939|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##X70649|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593034|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593033|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593031|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK297432|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK298426|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC053673|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC012132|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AB593032|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK298212|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##BC012739|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##AK313933|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##EF418570|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##EF418571|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##M55330|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	0.999115	CTCF.p2:-1:0.999
chr22	37681265	37681361	reg1033570.p2	4.078	+	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	-2737	+	TSC_hg19_v1_chr22_+_37678548 AK304453 BC017780	-2776	+	AF125349 AF075458 NM_013385 TSC_hg19_v1_chr22_+_37678513	-2845	+	TSC_hg19_v1_chr22_-_37823515 NM_052906	142215	-	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	201032	-	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	233994	-	BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4##AK304453|CYTH4|27128|cytohesin 4##BC017780|CYTH4|27128|cytohesin 4##AF125349|CYTH4|27128|cytohesin 4##AF075458|CYTH4|27128|cytohesin 4##NM_013385|CYTH4|27128|cytohesin 4##NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2##CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10	0.0	
chr2	89983236	89983347	reg1040839.p1	4.078	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-363438	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-470058	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-540702	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	94463	+	TSC_hg19_v1_chr2_+_90211706 Z69013	228427	+	TSC_hg19_v1_chr2_-_91847997 BC030764	1864712	-	BC070334|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus	0.0	
chr3	61550353	61550447	reg1031421.p1	4.078	+	L09247 AB385117 TSC_hg19_v1_chr3_+_61548071	-2424	+	BC047734 TSC_hg19_v1_chr3_+_61547294	-3114	+	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	-3189	+	AB055764 TSC_hg19_v1_chr3_-_61728812	178411	-	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	754306	+	BC017772 NM_020685	754995	+	L09247|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14	0.0	
chr5	138533873	138533950	reg1037458.p2	4.078	+	HQ589335 TSC_hg19_v1_chr5_+_138211097	-322820	+	TSC_hg19_v1_chr5_-_138211057 NM_015564	-322852	-	AK309790 TSC_hg19_v1_chr5_-_138211025 AB007876 BC028172 AK291064 AK297332	-322898	-	AF547994 TSC_hg19_v1_chr5_-_138533996 AK075177	78	-	TSC_hg19_v1_chr5_-_138533998 AY358950 BC011568	97	-	TSC_hg19_v1_chr5_-_138534058 AJ299442 AK074624 NM_001037633 NM_022464	135	-	HQ589335|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AF547994|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK075177|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AY358950|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##BC011568|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AJ299442|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK074624|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_001037633|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_022464|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)	0.07961	
chr8	130699743	130699886	reg1031504.p1	4.078	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-1893031	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-1951324	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-1951489	+	AB042405 NM_031415	99319	-	BC003599 TSC_hg19_v1_chr8_-_130951934	252101	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	252192	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.337801	CTCF.p2:16:0.338
chr10	105218977	105219157	reg1032244.p2	4.077	+	BC036193 BC036208 NM_001001412	-422	-	TSC_hg19_v1_chr10_-_105212166 AK022195 NM_015916	-6904	-	AF131810 TSC_hg19_v1_chr10_-_105212068 BC000039	-7003	-	BC043367 NM_001129742	19929	-	NM_004210 U87864	34667	+	AK299620 TSC_hg19_v1_chr10_+_105344798	125700	+	BC036193|CALHM1|255022|calcium homeostasis modulator 1##BC036208|CALHM1|255022|calcium homeostasis modulator 1##NM_001001412|CALHM1|255022|calcium homeostasis modulator 1##AK022195|CALHM2|51063|calcium homeostasis modulator 2##NM_015916|CALHM2|51063|calcium homeostasis modulator 2##AF131810|CALHM2|51063|calcium homeostasis modulator 2##BC000039|CALHM2|51063|calcium homeostasis modulator 2##BC043367|CALHM3|119395|calcium homeostasis modulator 3##NM_001129742|CALHM3|119395|calcium homeostasis modulator 3##NM_004210|NEURL|9148|neuralized homolog (Drosophila)##U87864|NEURL|9148|neuralized homolog (Drosophila)##AK299620|NEURL|9148|neuralized homolog (Drosophila)	0.0	
chr10	70748517	70748616	reg1030240.p1	4.077	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-31	+	BC104671 NM_004728 TSC_hg19_v1_chr10_+_70715925 BC009432 U41387 AK315585 BC008071 BC004182 BC017228 AB527408 CU675917	-32634	+	TSC_hg19_v1_chr10_+_70661097 CU674120 DQ892547 DQ895758	-87449	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	99270	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	99318	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	135325	+	NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##BC104671|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##NM_004728|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC009432|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##U41387|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##AK315585|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC008071|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC004182|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC017228|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##DQ892547|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##DQ895758|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##NM_002727|SRGN|5552|serglycin##D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.027291	
chr14	21159023	21159203	reg1002895.p1	4.077	+	TSC_hg19_v1_chr14_+_21156940 NM_001097577 NM_194431 BC062698 BC020704	-2181	+	TSC_hg19_v1_chr14_+_21152776 AK313989 BC015520 BC054880 BX248010	-6337	+	FJ236304 NM_001145 AK092422 NM_002937	-6760	+	NM_006683 X76383 BC096698 BC096731 BC069407	54999	+	AY358865 NM_022360 BC128030	77490	+	BC020848 NM_005615 AK313580	90105	+	NM_001097577|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_194431|RNASE4|6038|ribonuclease, RNase A family, 4##BC062698|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC020704|ANG|283|angiogenin, ribonuclease, RNase A family, 5##AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC015520|RNASE4|6038|ribonuclease, RNase A family, 4##BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BX248010|RNASE4|6038|ribonuclease, RNase A family, 4##FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5##AK092422|RNASE4|6038|ribonuclease, RNase A family, 4##NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4##NM_006683|EDDM3A|10876|epididymal protein 3A##X76383|EDDM3A|10876|epididymal protein 3A##BC096698|EDDM3A|10876|epididymal protein 3A##BC096731|EDDM3A|10876|epididymal protein 3A##BC069407|EDDM3A|10876|epididymal protein 3A##AY358865|EDDM3B|64184|epididymal protein 3B##NM_022360|EDDM3B|64184|epididymal protein 3B##BC128030|EDDM3B|64184|epididymal protein 3B##BC020848|RNASE6|6039|ribonuclease, RNase A family, k6##NM_005615|RNASE6|6039|ribonuclease, RNase A family, k6##AK313580|RNASE6|6039|ribonuclease, RNase A family, k6	0.0	
chr16	1756381	1756552	reg1024272.p2	4.077	+	TSC_hg19_v1_chr16_+_1756229 AB621811 AB028989 BC150266 NM_001040439 NM_015133 AK024437 BC137123 BC137124 BC144486 CR749696	-196	+	TSC_hg19_v1_chr16_+_1728290 BC014438 AK296888 AK303927 AY598330 AK309930	-28160	+	BC060853 TSC_hg19_v1_chr16_+_1728289	-28180	+	TSC_hg19_v1_chr16_-_1821542 AK308663 AB528303 DQ892515 EU176697 U29656	65073	-	BC000250 NM_002513 TSC_hg19_v1_chr16_-_1821728	65273	-	TSC_hg19_v1_chr16_-_1823132 EF036486 AB527721 BC001182 NM_023936	66669	-	AB028989|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC150266|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##NM_001040439|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##NM_015133|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##AK024437|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC137123|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC137124|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC144486|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##CR749696|MAPK8IP3|23162|mitogen-activated protein kinase 8 interacting protein 3##BC014438|HN1L|90861|hematological and neurological expressed 1-like##AK296888|HN1L|90861|hematological and neurological expressed 1-like##AK303927|HN1L|90861|hematological and neurological expressed 1-like##AY598330|HN1L|90861|hematological and neurological expressed 1-like##AK309930|HN1L|90861|hematological and neurological expressed 1-like##BC060853|HN1L|90861|hematological and neurological expressed 1-like##AK308663|NME3|4832|non-metastatic cells 3, protein expressed in##DQ892515|NME3|4832|non-metastatic cells 3, protein expressed in##EU176697|NME3|4832|non-metastatic cells 3, protein expressed in##U29656|NME3|4832|non-metastatic cells 3, protein expressed in##BC000250|NME3|4832|non-metastatic cells 3, protein expressed in##NM_002513|NME3|4832|non-metastatic cells 3, protein expressed in##BC001182|MRPS34|65993|mitochondrial ribosomal protein S34##NM_023936|MRPS34|65993|mitochondrial ribosomal protein S34	0.012732	
chr1	740208	740321	reg1031690.p1	4.077	+	TSC_hg19_v1_chr1_-_714015 BC006361	-26247	-	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	-118222	-	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-372616	+	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	22631	-	BC042880 TSC_hg19_v1_chr1_+_763038	22749	+	TSC_hg19_v1_chr1_+_763052 AK311121 AK311732 AK026873 BC102012 BC102023 BC107481	22806	+	BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115##BC042880|LOC643837|643837|uncharacterized LOC643837##AK311732|LOC643837|643837|uncharacterized LOC643837##AK026873|LOC643837|643837|uncharacterized LOC643837##BC102012|LOC643837|643837|uncharacterized LOC643837##BC102023|LOC643837|643837|uncharacterized LOC643837##BC107481|LOC643837|643837|uncharacterized LOC643837	0.010651	
chr1	81245134	81245232	reg1033338.p2	4.077	+	BC025721 AY358360 AK292894 AK313738 NM_022159	-1772756	-	NM_006417 TSC_hg19_v1_chr1_+_79115515 BC022870 AK316278 AK302527 AK316476	-2129685	+	NM_006820 TSC_hg19_v1_chr1_+_79086139 AK316232 AK223087 AK303187 AK293385 AB000115 AK312272 BC015932 AK225442	-2159052	+	BC031321 AK123422 TSC_hg19_v1_chr1_+_81772000	526744	+	AF104266 AF104938 AF104939 NM_012302	1020898	+	AK097722 TSC_hg19_v1_chr1_-_84326308	3081085	-	BC025721|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AY358360|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK292894|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##AK313738|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_022159|ELTD1|64123|EGF, latrophilin and seven transmembrane domain containing 1##NM_006417|IFI44|10561|interferon-induced protein 44##BC022870|IFI44|10561|interferon-induced protein 44##AK302527|IFI44|10561|interferon-induced protein 44##AK316476|IFI44|10561|interferon-induced protein 44##NM_006820|IFI44L|10964|interferon-induced protein 44-like##AK316232|IFI44L|10964|interferon-induced protein 44-like##AK223087|IFI44L|10964|interferon-induced protein 44-like##AK303187|IFI44L|10964|interferon-induced protein 44-like##AK293385|IFI44L|10964|interferon-induced protein 44-like##AB000115|IFI44L|10964|interferon-induced protein 44-like##AK312272|IFI44L|10964|interferon-induced protein 44-like##BC015932|IFI44L|10964|interferon-induced protein 44-like##AK225442|IFI44L|10964|interferon-induced protein 44-like##BC031321|LPHN2|23266|latrophilin 2##AK123422|LPHN2|23266|latrophilin 2##AF104266|LPHN2|23266|latrophilin 2##AF104938|LPHN2|23266|latrophilin 2##AF104939|LPHN2|23266|latrophilin 2##NM_012302|LPHN2|23266|latrophilin 2	0.265276	CTCF.p2:5:0.265
chr2	169491572	169491687	reg1030248.p2	4.077	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	-178754	+	TSC_hg19_v1_chr2_+_169312764 AK172775	-178870	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	-387556	-	AK093444 AX748130 NM_001171631	151419	+	NM_001039724 NM_001171632 BC014189 NM_052946 AK002203 AK290254 BC093072 AJ532842 DQ402497	167498	+	TSC_hg19_v1_chr2_-_169746945 AF225416 BC022255 NM_020675 AK291093	255312	-	NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6##AK172775|CERS6|253782|ceramide synthase 6##BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##AK093444|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171631|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001039724|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171632|NOSTRIN|115677|nitric oxide synthase trafficker##BC014189|NOSTRIN|115677|nitric oxide synthase trafficker##NM_052946|NOSTRIN|115677|nitric oxide synthase trafficker##AK002203|NOSTRIN|115677|nitric oxide synthase trafficker##AK290254|NOSTRIN|115677|nitric oxide synthase trafficker##BC093072|NOSTRIN|115677|nitric oxide synthase trafficker##AJ532842|NOSTRIN|115677|nitric oxide synthase trafficker##DQ402497|NOSTRIN|115677|nitric oxide synthase trafficker##AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)	0.0	
chr22	22171080	22171160	reg1032068.p1	4.077	+	BC034486 BC074501 TSC_hg19_v1_chr22_-_22090057 BC048303 NM_013313 AB098734 AB098735	-81072	-	NM_014337 NM_148175 NM_148176 TSC_hg19_v1_chr22_+_22020298 AF320072 AK289545 BC000022 U37219 AK127259 BC028385 AK299206 CR456548 DQ891659 DQ894846 AB463162 CU013148 CU013436 CU673996 CU688484	-150791	+	TSC_hg19_v1_chr22_+_21996619 CR456570 AF277316 AB528230 BC139837 CU013169 CU013457	-174481	+	TSC_hg19_v1_chr22_-_22221936 DQ399292 AB384931 EU176323 EU831429 EU831522 AK307615 Z11694 AK090869 BC099905	50709	-	AK295188 TSC_hg19_v1_chr22_-_22221938	50817	-	TSC_hg19_v1_chr22_-_22221955 BC017832 NM_002745 NM_138957	50850	-	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)##BC074501|YPEL1|29799|yippee-like 1 (Drosophila)##BC048303|YPEL1|29799|yippee-like 1 (Drosophila)##NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)##AB098734|YPEL1|29799|yippee-like 1 (Drosophila)##AB098735|YPEL1|29799|yippee-like 1 (Drosophila)##NM_014337|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148175|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148176|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AF320072|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK289545|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC000022|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##U37219|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK127259|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC028385|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK299206|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456548|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ891659|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ894846|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013148|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013436|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456570|SDF2L1|23753|stromal cell-derived factor 2-like 1##AF277316|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC139837|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013169|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013457|SDF2L1|23753|stromal cell-derived factor 2-like 1##DQ399292|MAPK1|5594|mitogen-activated protein kinase 1##EU176323|MAPK1|5594|mitogen-activated protein kinase 1##EU831429|MAPK1|5594|mitogen-activated protein kinase 1##EU831522|MAPK1|5594|mitogen-activated protein kinase 1##AK307615|MAPK1|5594|mitogen-activated protein kinase 1##Z11694|MAPK1|5594|mitogen-activated protein kinase 1##AK090869|MAPK1|5594|mitogen-activated protein kinase 1##BC099905|MAPK1|5594|mitogen-activated protein kinase 1##AK295188|MAPK1|5594|mitogen-activated protein kinase 1##BC017832|MAPK1|5594|mitogen-activated protein kinase 1##NM_002745|MAPK1|5594|mitogen-activated protein kinase 1##NM_138957|MAPK1|5594|mitogen-activated protein kinase 1	0.0	
chr22	50640470	50640620	reg1030156.p2	4.077	+	CR456464 BC001099 CU013014 CU013302 TSC_hg19_v1_chr22_+_50640050	-575	+	TSC_hg19_v1_chr22_+_50639439 AY324823 NM_031454 BC110866 BC051758	-1107	+	TSC_hg19_v1_chr22_+_50624353 BC012445 AL449244 NM_025204 AK292050 AY203945	-16164	+	AB051456 TSC_hg19_v1_chr22_-_50682891	42301	-	TSC_hg19_v1_chr22_-_50682948 BC144488 BC144489 BC150613 AF272887	42427	-	TSC_hg19_v1_chr22_-_50683439 BC151209 NM_020461 AL832617 AK310419	42885	-	CR456464|SELO|83642|selenoprotein O##BC001099|SELO|83642|selenoprotein O##AY324823|SELO|83642|selenoprotein O##NM_031454|SELO|83642|selenoprotein O##BC110866|SELO|83642|selenoprotein O##BC051758|SELO|83642|selenoprotein O##BC012445|TRABD|80305|TraB domain containing##AL449244|TRABD|80305|TraB domain containing##NM_025204|TRABD|80305|TraB domain containing##AK292050|TRABD|80305|TraB domain containing##AY203945|TRABD|80305|TraB domain containing##AB051456|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC144488|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC144489|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC150613|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AF272887|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC151209|TUBGCP6|85378|tubulin, gamma complex associated protein 6##NM_020461|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AL832617|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AK310419|TUBGCP6|85378|tubulin, gamma complex associated protein 6	0.0	
chr3	105555314	105555494	reg1025096.p2	4.077	+	CR749655 TSC_hg19_v1_chr3_-_105421064	-134350	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-469582	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	-469824	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	32403	-	TSC_hg19_v1_chr3_-_106959482 BC036229	1404075	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	1404188	+	CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595	0.0	
chr3	119814568	119814748	reg1035897.p2	4.077	+	TSC_hg19_v1_chr3_+_119813618 BC035247	-988	+	TSC_hg19_v1_chr3_-_119813270 BC012760 NM_001146156 NM_002093	-1507	-	BC000251 AK290897 TSC_hg19_v1_chr3_-_119812684	-2037	-	NM_001168271 NM_153002	148483	-	TSC_hg19_v1_chr3_-_120068162 AB528173 AM393236 BC013757 NM_001099678	253483	-	TSC_hg19_v1_chr3_-_120169846 AB527652 D89937 BC000055 U06863 AK300356 AK289388 AK291138 AK311050 AK300436 BX647421 AK312261 NM_007085	355179	-	BC012760|GSK3B|2932|glycogen synthase kinase 3 beta##NM_001146156|GSK3B|2932|glycogen synthase kinase 3 beta##NM_002093|GSK3B|2932|glycogen synthase kinase 3 beta##BC000251|GSK3B|2932|glycogen synthase kinase 3 beta##AK290897|GSK3B|2932|glycogen synthase kinase 3 beta##NM_001168271|GPR156|165829|G protein-coupled receptor 156##NM_153002|GPR156|165829|G protein-coupled receptor 156##AM393236|LRRC58|116064|leucine rich repeat containing 58##BC013757|LRRC58|116064|leucine rich repeat containing 58##NM_001099678|LRRC58|116064|leucine rich repeat containing 58##BC000055|FSTL1|11167|follistatin-like 1##U06863|FSTL1|11167|follistatin-like 1##AK300356|FSTL1|11167|follistatin-like 1##AK289388|FSTL1|11167|follistatin-like 1##AK291138|FSTL1|11167|follistatin-like 1##AK311050|FSTL1|11167|follistatin-like 1##AK300436|FSTL1|11167|follistatin-like 1##BX647421|FSTL1|11167|follistatin-like 1##AK312261|FSTL1|11167|follistatin-like 1##NM_007085|FSTL1|11167|follistatin-like 1	0.0	
chr3	1481225	1481325	reg1030921.p1	4.077	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	-346612	+	AK126307 TSC_hg19_v1_chr3_+_577916	-903360	+	NM_001253388 BC104918 BC143496 BC143498 AB384920	-1119863	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	659286	+	NM_001206955	799237	+	AK095729 TSC_hg19_v1_chr3_+_2553286	1072005	+	AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4##AK095729|CNTN4|152330|contactin 4	1.006626	CTCF.p2:7:0.936
chr6	158553095	158553196	reg1032121.p1	4.077	+	NM_001178088 TSC_hg19_v1_chr6_+_158438191 BX648749 AB002346 AF039945	-114973	+	TSC_hg19_v1_chr6_+_158402928 AY152396 AB384465	-150136	+	TSC_hg19_v1_chr6_+_158402923 AF318616	-150226	+	BC048335 BC001705 BC028594 BX648104 TSC_hg19_v1_chr6_-_158589279	36095	-	TSC_hg19_v1_chr6_-_158589295 AK027823 BC060795 NM_032861	36155	-	NM_207118 TSC_hg19_v1_chr6_+_158589381 AK055106 BC056906 AJ634743	36246	+	NM_001178088|SYNJ2|8871|synaptojanin 2##BX648749|SYNJ2|8871|synaptojanin 2##AB002346|SYNJ2|8871|synaptojanin 2##AF039945|SYNJ2|8871|synaptojanin 2##AY152396|SYNJ2|8871|synaptojanin 2##AF318616|SYNJ2|8871|synaptojanin 2##BC048335|SERAC1|84947|serine active site containing 1##BC001705|SERAC1|84947|serine active site containing 1##BC028594|SERAC1|84947|serine active site containing 1##BX648104|SERAC1|84947|serine active site containing 1##AK027823|SERAC1|84947|serine active site containing 1##BC060795|SERAC1|84947|serine active site containing 1##NM_032861|SERAC1|84947|serine active site containing 1##NM_207118|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AK055106|GTF2H5|404672|general transcription factor IIH, polypeptide 5##BC056906|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AJ634743|GTF2H5|404672|general transcription factor IIH, polypeptide 5	0.0	
chr7	150757011	150757170	reg1029620.p1	4.077	+	BC004893 BC010069 TSC_hg19_v1_chr7_+_150756753 X62137	-297	+	TSC_hg19_v1_chr7_+_150756716 U62531	-359	+	TSC_hg19_v1_chr7_+_150756689 NM_003040 AK312699	-423	+	AK295767 NM_001199693 TSC_hg19_v1_chr7_+_150759707 BC009386 BC009434 NM_001199694	2595	+	AB385070 CU680050 DQ892922 DQ896171 EU176731 AK292232 TSC_hg19_v1_chr7_-_150777889 AB209783 X86779 AK023141 AK223132 BC006386 BC011770 BC000377	20781	-	TSC_hg19_v1_chr7_-_150777891 BC039026 NM_006712 NM_033015	20830	-	BC004893|SLC4A2|6522|solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)##BC010069|SLC4A2|6522|solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)##X62137|SLC4A2|6522|solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)##U62531|SLC4A2|6522|solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)##NM_003040|SLC4A2|6522|solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)##AK312699|SLC4A2|6522|solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)##AK295767|SLC4A2|6522|solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)##NM_001199693|SLC4A2|6522|solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)##BC009386|SLC4A2|6522|solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)##BC009434|SLC4A2|6522|solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)##NM_001199694|SLC4A2|6522|solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1)##DQ892922|FASTK|10922|Fas-activated serine/threonine kinase##DQ896171|FASTK|10922|Fas-activated serine/threonine kinase##EU176731|FASTK|10922|Fas-activated serine/threonine kinase##AK292232|FASTK|10922|Fas-activated serine/threonine kinase##AB209783|FASTK|10922|Fas-activated serine/threonine kinase##X86779|FASTK|10922|Fas-activated serine/threonine kinase##AK023141|FASTK|10922|Fas-activated serine/threonine kinase##AK223132|FASTK|10922|Fas-activated serine/threonine kinase##BC006386|FASTK|10922|Fas-activated serine/threonine kinase##BC011770|FASTK|10922|Fas-activated serine/threonine kinase##BC000377|FASTK|10922|Fas-activated serine/threonine kinase##BC039026|FASTK|10922|Fas-activated serine/threonine kinase##NM_006712|FASTK|10922|Fas-activated serine/threonine kinase##NM_033015|FASTK|10922|Fas-activated serine/threonine kinase	0.822388	CTCF.p2:14:0.706
chrX	40105209	40105315	reg1035373.p1	4.077	+	BC114220 NM_001123383 NM_001123384	-68681	-	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	-148570	-	TSC_hg19_v1_chrX_+_38663536 AK001248	-1441722	+	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	334924	+	AF291814 TSC_hg19_v1_chrX_+_40440231 AK293510 BC084541 AK297007 AF109363	334980	+	TSC_hg19_v1_chrX_+_40440264 AK314633 AK315948	335010	+	BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF291814|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK293510|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##BC084541|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK297007|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF109363|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK314633|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK315948|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.032642	
chr1	169078287	169078411	reg1016761.p1	4.076	+	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	-2380	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	-379920	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-532557	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	258743	-	NM_003666 AF288161 U79751 AK223533	258874	+	TSC_hg19_v1_chr1_+_169337450 AK307151 AK291725 BC020716	259100	+	AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_003666|BLZF1|8548|basic leucine zipper nuclear factor 1##AF288161|BLZF1|8548|basic leucine zipper nuclear factor 1##U79751|BLZF1|8548|basic leucine zipper nuclear factor 1##AK223533|BLZF1|8548|basic leucine zipper nuclear factor 1##AK307151|BLZF1|8548|basic leucine zipper nuclear factor 1##AK291725|BLZF1|8548|basic leucine zipper nuclear factor 1##BC020716|BLZF1|8548|basic leucine zipper nuclear factor 1	0.268438	CTCF.p2:-22:0.268
chr12	102878194	102878310	reg1008195.p1	4.076	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-3870	-	M11568 TSC_hg19_v1_chr12_-_102874344	-3910	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-3930	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	432714	-	TSC_hg19_v1_chr12_-_103311062 BC026251	432811	-	L47726 NM_000277 U49897	433128	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.0	
chr12	26462707	26462804	reg1032896.p1	4.076	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-114170	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-114464	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	-184834	-	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	523325	-	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	628154	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	628475	-	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)	0.0	
chr18	68117997	68118129	reg1034064.p1	4.076	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-161802	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-161896	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-245125	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	2092712	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	2093667	-	AF448839 NM_138999	2414870	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.68318	CTCF.p2:14:0.683
chr18	74694997	74695177	reg1000059.p1	4.076	+	BC130034 TSC_hg19_v1_chr18_-_74692098	-3057	-	AF085243 AF085244 NM_007345	-158972	+	TSC_hg19_v1_chr18_+_74534512 BX648028	-160577	+	AK074315 TSC_hg19_v1_chr18_-_74728814	33669	-	CR536534 CR541919 TSC_hg19_v1_chr18_-_74729012 AK296492 M30515 M30516 BC008749 BC101771 BC101773 BC143348 BC143350 M30047 BC080654 M13577 AK289893 AK098402 AK128788 CR627018 AK128770 BC068550	33908	-	TSC_hg19_v1_chr18_-_74729052 AK314553 NM_001025081 NM_001025090 NM_001025092 NM_002385 AK293922	33980	-	BC130034|MBP|4155|myelin basic protein##AF085243|ZNF236|7776|zinc finger protein 236##AF085244|ZNF236|7776|zinc finger protein 236##NM_007345|ZNF236|7776|zinc finger protein 236##BX648028|ZNF236|7776|zinc finger protein 236##AK074315|MBP|4155|myelin basic protein##CR536534|MBP|4155|myelin basic protein##CR541919|MBP|4155|myelin basic protein##M30515|MBP|4155|myelin basic protein##M30516|MBP|4155|myelin basic protein##BC008749|MBP|4155|myelin basic protein##BC101771|MBP|4155|myelin basic protein##BC101773|MBP|4155|myelin basic protein##BC143348|MBP|4155|myelin basic protein##BC143350|MBP|4155|myelin basic protein##M30047|MBP|4155|myelin basic protein##BC080654|MBP|4155|myelin basic protein##M13577|MBP|4155|myelin basic protein##AK289893|MBP|4155|myelin basic protein##AK098402|MBP|4155|myelin basic protein##AK128788|MBP|4155|myelin basic protein##CR627018|MBP|4155|myelin basic protein##AK128770|MBP|4155|myelin basic protein##BC068550|MBP|4155|myelin basic protein##AK314553|MBP|4155|myelin basic protein##NM_001025081|MBP|4155|myelin basic protein##NM_001025090|MBP|4155|myelin basic protein##NM_001025092|MBP|4155|myelin basic protein##NM_002385|MBP|4155|myelin basic protein##AK293922|MBP|4155|myelin basic protein	0.0	
chr19	58341607	58341718	reg1028814.p2	4.076	+	TSC_hg19_v1_chr19_+_58331098 AK095812 AK303856 U71363	-10575	+	AK097041 AK293445 NM_024762	-15382	-	BC051325 TSC_hg19_v1_chr19_+_58281063 AK300419 BC124558 BC041660 AB527919	-60533	+	AK122919 NM_001204818 AK299091	8	+	NM_001204817 NM_032828 TSC_hg19_v1_chr19_+_58361208	19533	+	TSC_hg19_v1_chr19_+_58361226 AK027616 BC126237 BC126239 BC144112 BC144113 AB464407	19650	+	U71363|LOC100293516|100293516|zinc finger protein##AK097041|ZNF552|79818|zinc finger protein 552##AK293445|ZNF552|79818|zinc finger protein 552##NM_024762|ZNF552|79818|zinc finger protein 552##BC051325|ZNF586|54807|zinc finger protein 586##AK300419|ZNF586|54807|zinc finger protein 586##BC124558|ZNF586|54807|zinc finger protein 586##BC041660|ZNF586|54807|zinc finger protein 586##NM_001204818|LOC100293516|100293516|zinc finger protein##AK299091|LOC100293516|100293516|zinc finger protein##NM_001204817|ZNF587|84914|zinc finger protein 587##NM_032828|ZNF587|84914|zinc finger protein 587##AK027616|ZNF587|84914|zinc finger protein 587##BC126237|ZNF587|84914|zinc finger protein 587##BC126239|ZNF587|84914|zinc finger protein 587##BC144112|ZNF587|84914|zinc finger protein 587##BC144113|ZNF587|84914|zinc finger protein 587	0.999685	CTCF.p2:-11:1.000
chr2	11975764	11975879	reg1032409.p2	4.076	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-89046	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-165530	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-292978	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	881432	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	882095	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	882576	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.960018	CTCF.p2:-18:0.960
chr5	116124367	116124548	reg1035298.p2	4.076	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-213943	-	TSC_hg19_v1_chr5_+_115898220 D28352	-226233	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-703736	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2199781	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2282354	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2282708	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr12	31964162	31964300	reg1031026.p2	4.075	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	-19027	-	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	-82175	-	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	-82257	-	TSC_hg19_v1_chr12_+_32112348 NM_018169	148100	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	148163	+	TSC_hg19_v1_chr12_+_32259750 BC010091	295483	+	BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)	0.0	
chr18	29523350	29523449	reg1029573.p2	4.075	+	TSC_hg19_v1_chr18_-_29523092 NM_014939 AL136749	-291	-	TSC_hg19_v1_chr18_-_29523064 BC059380 AK292537	-332	-	BC127109 BC127110 TSC_hg19_v1_chr18_-_29523061	-375	-	AK000463 AK225518 NM_017831	75045	+	TSC_hg19_v1_chr18_+_29598794 BC012021 CU680164	75407	+	NM_016271 TSC_hg19_v1_chr18_+_29671843	148437	+	NM_014939|TRAPPC8|22878|trafficking protein particle complex 8##AL136749|TRAPPC8|22878|trafficking protein particle complex 8##BC059380|TRAPPC8|22878|trafficking protein particle complex 8##AK292537|TRAPPC8|22878|trafficking protein particle complex 8##BC127109|TRAPPC8|22878|trafficking protein particle complex 8##BC127110|TRAPPC8|22878|trafficking protein particle complex 8##AK000463|RNF125|54941|ring finger protein 125##AK225518|RNF125|54941|ring finger protein 125##NM_017831|RNF125|54941|ring finger protein 125##BC012021|RNF125|54941|ring finger protein 125##NM_016271|RNF138|51444|ring finger protein 138	0.035614	
chr19	14700377	14700533	reg1035115.p1	4.075	+	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	-6541	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	-17606	-	TSC_hg19_v1_chr19_+_14640435 AK001416 AK315412 BC007801 BC013881 BC005952 AF038958 BC002425 BC034484 AF222742 AX771269 AF038959 AB529027 DQ891949 DQ895135 EU832830 GQ129437	-59996	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	85222	-	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	100309	+	BC082991 AF114491 AK301458 AK222891 AK298700 TSC_hg19_v1_chr19_-_14887654	187183	-	NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AK001416|TECR|9524|trans-2,3-enoyl-CoA reductase##AK315412|TECR|9524|trans-2,3-enoyl-CoA reductase##BC007801|TECR|9524|trans-2,3-enoyl-CoA reductase##BC013881|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005952|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038958|TECR|9524|trans-2,3-enoyl-CoA reductase##BC002425|TECR|9524|trans-2,3-enoyl-CoA reductase##BC034484|TECR|9524|trans-2,3-enoyl-CoA reductase##AF222742|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038959|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ891949|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ895135|TECR|9524|trans-2,3-enoyl-CoA reductase##EU832830|TECR|9524|trans-2,3-enoyl-CoA reductase##GQ129437|TECR|9524|trans-2,3-enoyl-CoA reductase##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333##BC082991|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AF114491|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK301458|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK222891|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK298700|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2	0.0	
chr1	9749383	9749457	reg1021658.p2	4.075	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	-37616	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-100464	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-149784	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	134475	-	TSC_hg19_v1_chr1_-_9884023 AK304813	134601	-	TSC_hg19_v1_chr1_-_9884024 BC033902	134624	-	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1	0.0	
chr21	43889593	43889698	reg1029982.p2	4.075	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-65633	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-73484	-	M12075 BC032811 NM_003225 X00474 X52003	-103023	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	26735	-	AJ269529 NM_018964	30096	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	44358	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.0	
chr3	69476169	69476293	reg1035652.p1	4.075	+	NM_015123 BC057836	-40790	-	AB023230 TSC_hg19_v1_chr3_-_69435240	-41000	-	TSC_hg19_v1_chr3_-_69299315 AK295045	-176921	-	TSC_hg19_v1_chr3_-_69591738 AK091076	115526	-	TSC_hg19_v1_chr3_+_69788632 NM_198159 AK291318 AL110195 AB006909 AB527520	312422	+	TSC_hg19_v1_chr3_+_69812620 AK296129 NM_001184967	336432	+	NM_015123|FRMD4B|23150|FERM domain containing 4B##BC057836|FRMD4B|23150|FERM domain containing 4B##AB023230|FRMD4B|23150|FERM domain containing 4B##AK295045|FRMD4B|23150|FERM domain containing 4B##AK091076|FRMD4B|23150|FERM domain containing 4B##NM_198159|MITF|4286|microphthalmia-associated transcription factor##AK291318|MITF|4286|microphthalmia-associated transcription factor##AL110195|MITF|4286|microphthalmia-associated transcription factor##AB006909|MITF|4286|microphthalmia-associated transcription factor##AK296129|MITF|4286|microphthalmia-associated transcription factor##NM_001184967|MITF|4286|microphthalmia-associated transcription factor	0.914371	CTCF.p2:46:0.914
chr4	6911235	6911334	reg1024999.p2	4.075	+	TSC_hg19_v1_chr4_+_6911192 NM_001113361	-132	+	TSC_hg19_v1_chr4_+_6784518 AK124715 EF553521	-126756	+	TSC_hg19_v1_chr4_+_6784467 BC150286 D86985	-126810	+	TSC_hg19_v1_chr4_-_6911379 BC032036	121	-	TSC_hg19_v1_chr4_+_6911497 NM_020773	192	+	TSC_hg19_v1_chr4_+_6911552 BC041167	282	+	NM_001113361|TBC1D14|57533|TBC1 domain family, member 14##AK124715|KIAA0232|9778|KIAA0232##EF553521|KIAA0232|9778|KIAA0232##BC150286|KIAA0232|9778|KIAA0232##D86985|KIAA0232|9778|KIAA0232##NM_020773|TBC1D14|57533|TBC1 domain family, member 14##BC041167|TBC1D14|57533|TBC1 domain family, member 14	0.159207	
chr5	60351504	60351619	reg1011170.p2	4.075	+	TSC_hg19_v1_chr5_+_60241003 AK026051 NM_174889 AF087990 AK291296 BC001753 BC070357 BC033965 AB183433	-110549	+	AB527753 BT020021 CR536563 TSC_hg19_v1_chr5_-_60240898 U28413 AK056931 AK304610 AK314511 BC009793 AK290726 AK294856 NM_000082	-110691	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	-211490	-	BC146876 BC146881 BC014242 BC047489 TSC_hg19_v1_chr5_-_60458209	106617	-	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	106706	-	TSC_hg19_v1_chr5_+_60628085 NM_020928	276537	+	AK026051|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_174889|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AF087990|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AK291296|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC001753|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC070357|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC033965|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AB183433|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BT020021|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##CR536563|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##U28413|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK056931|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK304610|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK314511|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##BC009793|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK290726|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK294856|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##NM_000082|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7##BC146876|C5orf43|643155|chromosome 5 open reading frame 43##BC146881|C5orf43|643155|chromosome 5 open reading frame 43##BC014242|C5orf43|643155|chromosome 5 open reading frame 43##BC047489|C5orf43|643155|chromosome 5 open reading frame 43##BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6	0.0	
chr7	50252973	50253141	reg1014131.p2	4.075	+	NM_001161834	-117376	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	-120233	-	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-439787	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	91296	+	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	95262	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	264997	-	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1	0.0	
chr9	77801802	77801974	reg1032866.p1	4.075	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	-98378	+	TSC_hg19_v1_chr9_+_77703406 NM_012383	-98488	+	BC001366 TSC_hg19_v1_chr9_-_77703070 AK000566 AK097144 AK023413 BC036804 NM_001127603 NM_017881 BC026243	-98800	-	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	703747	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	1207503	-	AY196293 NM_001097634	1254693	+	AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1##NM_012383|OSTF1|26578|osteoclast stimulating factor 1##BC001366|C9orf95|54981|chromosome 9 open reading frame 95##AK000566|C9orf95|54981|chromosome 9 open reading frame 95##AK097144|C9orf95|54981|chromosome 9 open reading frame 95##AK023413|C9orf95|54981|chromosome 9 open reading frame 95##BC036804|C9orf95|54981|chromosome 9 open reading frame 95##NM_001127603|C9orf95|54981|chromosome 9 open reading frame 95##NM_017881|C9orf95|54981|chromosome 9 open reading frame 95##BC026243|C9orf95|54981|chromosome 9 open reading frame 95##NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.925203	CTCF.p2:-4:0.925
chr10	109625582	109625686	reg1031249.p1	4.074	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-701258	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-1166575	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-3224589	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	2057575	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	2057643	-	NM_019903 AB209810 BC057285	2140147	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.019309	
chr10	14598518	14598630	reg1029243.p2	4.074	+	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	-225724	-	TSC_hg19_v1_chr10_-_14050453 AK001072	-548082	-	TSC_hg19_v1_chr10_-_13749648 AK057828	-848885	-	TSC_hg19_v1_chr10_-_14646259 BC064407	47743	-	TSC_hg19_v1_chr10_-_14646423 BC072452	47855	-	AK127413 NM_031453	218321	-	AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##AK001072|FRMD4A|55691|FERM domain containing 4A##AK057828|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B##AK127413|FAM107B|83641|family with sequence similarity 107, member B##NM_031453|FAM107B|83641|family with sequence similarity 107, member B	0.102857	
chr10	84674555	84674706	reg1030695.p1	4.074	+	DQ857894 NM_001165973	-1037188	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-1039548	+	AK123978 NM_001145719	-2374056	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	1224627	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	1257162	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	1258929	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.0	
chr12	6536137	6536262	reg1031675.p1	4.074	+	TSC_hg19_v1_chr12_+_6493333 AK095418 BC026262 AK027080 L04270 NM_002342 AB527559 DQ891995 DQ895185 CU693188	-42827	+	AK304379 NM_001159575	-49677	-	NM_001038	-51295	-	AK315732 NM_001242 BC012160 M63928 DQ892296 EU176659 AB590221 CU680244	17947	+	NM_018009 TSC_hg19_v1_chr12_+_6561272 BC015017 AK223163 AK001005 AK002056 AK222956 AK098035 HQ258015	25095	+	TSC_hg19_v1_chr12_-_6579844 AF060538 BC023286 AK289498 AK296294 AK303137 AK309184 NM_014231 NM_016830 NM_199245	43615	-	AK095418|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##BC026262|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK027080|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##L04270|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##NM_002342|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ891995|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ895185|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK304379|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001159575|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001038|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##AK315732|CD27|939|CD27 molecule##NM_001242|CD27|939|CD27 molecule##BC012160|CD27|939|CD27 molecule##M63928|CD27|939|CD27 molecule##DQ892296|CD27|939|CD27 molecule##EU176659|CD27|939|CD27 molecule##NM_018009|TAPBPL|55080|TAP binding protein-like##BC015017|TAPBPL|55080|TAP binding protein-like##AK223163|TAPBPL|55080|TAP binding protein-like##AK001005|TAPBPL|55080|TAP binding protein-like##AK002056|TAPBPL|55080|TAP binding protein-like##AK222956|TAPBPL|55080|TAP binding protein-like##AK098035|TAPBPL|55080|TAP binding protein-like##HQ258015|TAPBPL|55080|TAP binding protein-like##AF060538|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC023286|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK289498|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK296294|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK303137|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK309184|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_014231|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_016830|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_199245|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)	0.0	
chr13	33709115	33709233	reg1030532.p1	4.074	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-118651	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-548491	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-548535	+	AY082590 BC046563 NM_001243466 NM_178007	51041	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	70990	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	150693	-	AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr14	69083111	69083275	reg1031584.p1	4.074	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-796673	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-799894	-	AK315462 NM_152443	-914591	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	176527	-	NM_001244698 NM_004926	177437	-	NM_001244701 AB528867	179791	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr14	75655360	75655467	reg1034043.p2	4.074	+	TSC_hg19_v1_chr14_-_75643341 NM_006827	-12061	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	-12080	-	TSC_hg19_v1_chr14_-_75643322 AK296800 AK312384	-12093	-	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	90169	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	239228	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	239600	+	NM_006827|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK296800|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK312384|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2	0.0	
chr14	85662333	85662438	reg1031254.p1	4.074	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-3662158	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-3662237	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-3797559	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	334088	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	334156	+	TSC_hg19_v1_chr14_+_85999692 AK297248	337200	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.021585	
chr17	75084619	75084788	reg1021678.p1	4.074	+	AB114297 NM_198955 BC144361	-215943	+	TSC_hg19_v1_chr17_+_74864556 AK057861 AB235153 BC041577 NM_001199172 NM_144677 BC062354	-220037	+	TSC_hg19_v1_chr17_+_74734111 AK308058 AF015184 AK000233	-350550	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	94	+	NM_001204410 FM995496 AF130050	565	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	52331	+	AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AK308058|MFSD11|79157|major facilitator superfamily domain containing 11##AF015184|MFSD11|79157|major facilitator superfamily domain containing 11##AK000233|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001204410|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995496|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AF130050|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)	0.0	
chr19	11160040	11160155	reg1033548.p2	4.074	+	BC136644 AB590582 BC151849 EU430756 EU430757 EU430758 EU430759 NM_001128845 NM_001128846 NM_001128847 NM_001128848 AB209313	-65221	+	TSC_hg19_v1_chr19_+_11071823 NM_001128849 U29175 D26156	-88273	+	TSC_hg19_v1_chr19_+_11071720 BC035916	-88347	+	NM_000527 NM_001195798 NM_001195799 NM_001195800 NM_001195802 NM_001195803 TSC_hg19_v1_chr19_+_11200115	39980	+	TSC_hg19_v1_chr19_+_11200138 AK295612 AK296312 AK299038 AK300313	40035	+	TSC_hg19_v1_chr19_+_11200148 AB209409 BC014514 AY114155 AB384938 DQ893879 BT007361	40088	+	BC136644|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC151849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430756|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430757|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430758|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##EU430759|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128845|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128846|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128847|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128848|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##AB209313|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_001128849|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##U29175|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##D26156|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##BC035916|SMARCA4|6597|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4##NM_000527|LDLR|3949|low density lipoprotein receptor##NM_001195798|LDLR|3949|low density lipoprotein receptor##NM_001195799|LDLR|3949|low density lipoprotein receptor##NM_001195800|LDLR|3949|low density lipoprotein receptor##NM_001195802|LDLR|3949|low density lipoprotein receptor##NM_001195803|LDLR|3949|low density lipoprotein receptor##AK295612|LDLR|3949|low density lipoprotein receptor##AK296312|LDLR|3949|low density lipoprotein receptor##AK299038|LDLR|3949|low density lipoprotein receptor##AK300313|LDLR|3949|low density lipoprotein receptor##AB209409|LDLR|3949|low density lipoprotein receptor##BC014514|LDLR|3949|low density lipoprotein receptor##AY114155|LDLR|3949|low density lipoprotein receptor##DQ893879|LDLR|3949|low density lipoprotein receptor##BT007361|LDLR|3949|low density lipoprotein receptor	0.0	
chr19	16452905	16452997	reg1035630.p1	4.074	+	AF134053 TSC_hg19_v1_chr19_+_16435803	-17182	+	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	-17310	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	-144201	+	BC142662 AB527825 AF110265 BC131590 BC037558 TSC_hg19_v1_chr19_-_16582771 AB015346 NM_021235 BC067114 BC051873 BC142716 AK296473 AK297428 AK024166	129825	-	TSC_hg19_v1_chr19_-_16582810 AK291359	129901	-	CU677059 AB576176 DQ890903 DQ894056 AK058084 BC014595 NM_145046	154019	-	AF134053|KLF2|10365|Kruppel-like factor 2 (lung)##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)##AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC142662|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AF110265|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC131590|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC037558|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB015346|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##NM_021235|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC067114|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC051873|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC142716|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK296473|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK297428|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK024166|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK291359|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB576176|CALR3|125972|calreticulin 3##DQ890903|CALR3|125972|calreticulin 3##DQ894056|CALR3|125972|calreticulin 3##AK058084|CALR3|125972|calreticulin 3##BC014595|CALR3|125972|calreticulin 3##NM_145046|CALR3|125972|calreticulin 3	0.0	
chr19	30206439	30206548	reg1001704.p1	4.074	+	TSC_hg19_v1_chr19_-_30206402 NM_031448	-71	-	NM_001031726 TSC_hg19_v1_chr19_-_30206184 BC004957 BC009946 BC063518 AK057185	-401	-	TSC_hg19_v1_chr19_+_30156375 AK225814	-50072	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	96408	+	BC026184 NM_001252641	208057	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	226789	+	NM_031448|C19orf12|83636|chromosome 19 open reading frame 12##NM_001031726|C19orf12|83636|chromosome 19 open reading frame 12##BC004957|C19orf12|83636|chromosome 19 open reading frame 12##BC009946|C19orf12|83636|chromosome 19 open reading frame 12##BC063518|C19orf12|83636|chromosome 19 open reading frame 12##AK057185|C19orf12|83636|chromosome 19 open reading frame 12##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone	0.022596	
chr20	46068912	46069059	reg1031028.p2	4.074	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-83497	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-92338	-	TSC_hg19_v1_chr20_-_45927496 BC030721	-141416	-	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	61637	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	61699	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	345767	-	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2	0.0	
chr20	48295717	48295787	reg1032429.p2	4.074	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	-111063	-	BC110572 BC110573 NM_004975	-196573	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-400557	+	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	34478	-	AB004550 TSC_hg19_v1_chr20_-_48330359	34604	-	TSC_hg19_v1_chr20_-_48330471 NM_004776	34714	-	AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.0	
chr10	80063282	80063384	reg1033155.p2	4.073	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-269702	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-269777	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-274019	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	765455	+	TSC_hg19_v1_chr10_+_80899458 AK025812	836151	+	TSC_hg19_v1_chr10_+_81003207 AB033050	939797	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.0	
chr11	86513705	86513871	reg1037806.p1	4.073	+	NM_007173 TSC_hg19_v1_chr11_+_86511583 AK316508 AK075362 AK315562 AK304301 AK304054 BC063022 AL136914 BC001278 AF015287 AF193611 AY359033	-2236	+	TSC_hg19_v1_chr11_-_86383659 AK300974 NM_001161586	-130123	-	X79440 TSC_hg19_v1_chr11_-_86383470 NM_006680 AK313695	-130346	-	TSC_hg19_v1_chr11_-_86666094 AY462097	152319	-	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	152600	-	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	235190	+	NM_007173|PRSS23|11098|protease, serine, 23##AK075362|PRSS23|11098|protease, serine, 23##AK315562|PRSS23|11098|protease, serine, 23##AK304301|PRSS23|11098|protease, serine, 23##AK304054|PRSS23|11098|protease, serine, 23##AL136914|PRSS23|11098|protease, serine, 23##BC001278|PRSS23|11098|protease, serine, 23##AF015287|PRSS23|11098|protease, serine, 23##AF193611|PRSS23|11098|protease, serine, 23##AY359033|PRSS23|11098|protease, serine, 23##AK300974|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001161586|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##X79440|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_006680|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK313695|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AY462097|FZD4|8322|frizzled family receptor 4##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135	0.0	
chr14	34513172	34513302	reg1029229.p2	4.073	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	-93088	-	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1104747	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1714701	+	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	418250	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	495648	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	586118	-	BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6	0.0	
chr16	29874868	29875027	reg1034726.p2	4.073	+	AK094468 TSC_hg19_v1_chr16_-_29874513 BC001444 AK222676 AK290632 AF014807 AK300805 AK131349 AK314544 NM_006319	-473	-	TSC_hg19_v1_chr16_+_29831782 AK301130 AK310168 AK298238 AJ291366 AJ291367 AK293302 AK302052 BC015623	-43167	+	NM_005115 NM_017458 TSC_hg19_v1_chr16_+_29831736	-43222	+	CU674276 EU176661 BC000567 AJ245820 AJ245821 AJ245822 AK293675 TSC_hg19_v1_chr16_-_29910597 AY358404 AK299103 NM_001114099 NM_001114100 NM_001243332 NM_001243333 NM_012410 NM_201575	35527	-	NM_181718 BC126319 BC126321 BC144152 HQ258402 BC085011 BC009033	37335	+	AB464051 DQ891555 DQ894742 CU690312 TSC_hg19_v1_chr16_-_29937488 AF401315 AY027918 AF289573	62489	-	AK094468|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##BC001444|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AK222676|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AK290632|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AF014807|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AK300805|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AK131349|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AK314544|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##NM_006319|CDIPT|10423|CDP-diacylglycerol--inositol 3-phosphatidyltransferase##AK301130|MVP|9961|major vault protein##AK310168|MVP|9961|major vault protein##AK298238|MVP|9961|major vault protein##AJ291366|MVP|9961|major vault protein##AJ291367|MVP|9961|major vault protein##AK293302|MVP|9961|major vault protein##AK302052|MVP|9961|major vault protein##BC015623|MVP|9961|major vault protein##NM_005115|MVP|9961|major vault protein##NM_017458|MVP|9961|major vault protein##EU176661|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##BC000567|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##AJ245820|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##AJ245821|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##AJ245822|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##AK293675|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##AY358404|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##AK299103|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_001114099|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_001114100|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_001243332|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_001243333|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_012410|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_201575|SEZ6L2|26470|seizure related 6 homolog (mouse)-like 2##NM_181718|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##BC126319|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##BC126321|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##BC144152|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##HQ258402|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##BC085011|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##BC009033|ASPHD1|253982|aspartate beta-hydroxylase domain containing 1##DQ891555|KCTD13|253980|potassium channel tetramerisation domain containing 13##DQ894742|KCTD13|253980|potassium channel tetramerisation domain containing 13##AF401315|KCTD13|253980|potassium channel tetramerisation domain containing 13##AY027918|KCTD13|253980|potassium channel tetramerisation domain containing 13##AF289573|KCTD13|253980|potassium channel tetramerisation domain containing 13	0.043338	
chr17	40268641	40268771	reg1002202.p1	4.073	+	BC014949 AK296840 AK300900 AK021416 AK225549 NM_024119	-3988	-	NM_001242704	-78663	-	TSC_hg19_v1_chr17_+_40172124 AK027265 AK297975 AK054571 BC007316 BC007450	-96560	+	TSC_hg19_v1_chr17_-_40273386 AB527835 AF029777 BC032743 BC105977 BC039907 NM_021078	4643	-	NM_033194 BC093991 BC093993 AK130947	6095	+	TSC_hg19_v1_chr17_-_40306986 U18420	38255	-	BC014949|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK296840|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK300900|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK021416|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK225549|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_024119|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_001242704|ZNF385C|201181|zinc finger protein 385C##AK027265|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK297975|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK054571|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007316|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007450|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AF029777|KAT2A|2648|K(lysine) acetyltransferase 2A##BC032743|KAT2A|2648|K(lysine) acetyltransferase 2A##BC105977|KAT2A|2648|K(lysine) acetyltransferase 2A##BC039907|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_021078|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_033194|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093991|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093993|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##AK130947|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##U18420|RAB5C|5878|RAB5C, member RAS oncogene family	0.0	
chr2	12190547	12190696	reg1033673.p2	4.073	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-303846	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-380330	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-507778	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	666632	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	667295	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	667776	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.0	
chr21	43282221	43282324	reg1031484.p2	4.073	+	AK027424 TSC_hg19_v1_chr21_-_43187270	-95005	-	TSC_hg19_v1_chr21_-_43187213 EU832165 EU832259 BC035755 BC110617 BC110618 AB047783 AJ278016 NM_020639	-95050	-	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	-402189	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	17226	-	BC062323 AL833323 NM_199050	64517	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	91811	-	AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4##NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2	0.860438	CTCF.p2:19:0.860
chr22	24059679	24059820	reg1033464.p2	4.073	+	TSC_hg19_v1_chr22_-_24059525 BX538181 AK056875 AK091837 AX747211	-204	-	TSC_hg19_v1_chr22_-_24059515 BC063045 BC050388 AK300413	-239	-	TSC_hg19_v1_chr22_-_24059494 BC033757	-284	-	CR456615 TSC_hg19_v1_chr22_-_24093285 BC040161 NM_021916	33410	-	CU013206 CU013494 DQ893106 DQ896379 CR456610 AK312098 AF163825 AY359000 NM_013378 BC020666	36853	-	AK093880 AX748349 NM_182520	45458	+	BX538181|GUSBP11|91316|glucuronidase, beta pseudogene 11##AK056875|GUSBP11|91316|glucuronidase, beta pseudogene 11##AK091837|GUSBP11|91316|glucuronidase, beta pseudogene 11##BC063045|GUSBP11|91316|glucuronidase, beta pseudogene 11##BC050388|GUSBP11|91316|glucuronidase, beta pseudogene 11##AK300413|GUSBP11|91316|glucuronidase, beta pseudogene 11##CR456615|ZNF70|7621|zinc finger protein 70##BC040161|ZNF70|7621|zinc finger protein 70##NM_021916|ZNF70|7621|zinc finger protein 70##CU013206|VPREB3|29802|pre-B lymphocyte 3##CU013494|VPREB3|29802|pre-B lymphocyte 3##DQ893106|VPREB3|29802|pre-B lymphocyte 3##DQ896379|VPREB3|29802|pre-B lymphocyte 3##CR456610|VPREB3|29802|pre-B lymphocyte 3##AK312098|VPREB3|29802|pre-B lymphocyte 3##AF163825|VPREB3|29802|pre-B lymphocyte 3##AY359000|VPREB3|29802|pre-B lymphocyte 3##NM_013378|VPREB3|29802|pre-B lymphocyte 3##BC020666|VPREB3|29802|pre-B lymphocyte 3##AK093880|C22orf15|150248|chromosome 22 open reading frame 15##NM_182520|C22orf15|150248|chromosome 22 open reading frame 15	0.0	
chr2	37827993	37828142	reg1035543.p1	4.073	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-256254	+	BC030706 BC012820 AB015982 NM_005813	-283874	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-369221	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	70712	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	71322	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	324365	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.0	
chr7	117021547	117021670	reg1035473.p1	4.073	+	BC078170 AK056742 NM_003391 X07876	-58273	-	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	-361243	+	TSC_hg19_v1_chr7_+_116660271 AK093212	-361341	+	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	45937	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	98430	+	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	491873	-	BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##AK093212|ST7|7982|suppression of tumorigenicity 7##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2	0.0	
chr7	303295	303476	reg1008735.p2	4.073	+	BC040074 TSC_hg19_v1_chr7_+_193137	-110240	+	AF533706 NM_020223 TSC_hg19_v1_chr7_+_193043	-110368	+	None	None	None	NM_001195127	26750	+	TSC_hg19_v1_chr7_-_558849 AK292217	255449	-	X03795 X06374 TSC_hg19_v1_chr7_-_559093	255679	-	BC040074|FAM20C|56975|family with sequence similarity 20, member C##AF533706|FAM20C|56975|family with sequence similarity 20, member C##NM_020223|FAM20C|56975|family with sequence similarity 20, member C##NM_001195127|LOC100288524|100288524|forkhead box L1-like##AK292217|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X03795|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X06374|PDGFA|5154|platelet-derived growth factor alpha polypeptide	3.854024	CTCF.p2:-1:0.997	CTCF.p2:51:0.620	CTCF.p2:-54:0.620	CTCF.p2:104:0.997	CTCF.p2:-107:0.620
chr9	135287631	135287761	reg1031670.p1	4.073	+	AK128819 NM_207417 BC118593 BC124555	-2084	+	TSC_hg19_v1_chr9_-_135282210 BC050734 X83973 BC143821 BC127669 BC127670 BC143048 BC143049 BC062692 BC104639 AK225119 AK302902 NM_001205296 NM_007344	-5495	-	TSC_hg19_v1_chr9_-_135230374 BX538166 NM_015046	-57289	-	TSC_hg19_v1_chr9_+_135457992 AK054797 NM_020064 BC136956 BC136969 BC144433 AF325688 AB463426 AF321618	170383	+	TSC_hg19_v1_chr9_-_135545374 AK225121 AK027002 AK225350 AK304715 BC012726	257684	-	TSC_hg19_v1_chr9_+_135545447 BC060821	257722	+	AK128819|C9orf171|389799|chromosome 9 open reading frame 171##NM_207417|C9orf171|389799|chromosome 9 open reading frame 171##BC118593|C9orf171|389799|chromosome 9 open reading frame 171##BC124555|C9orf171|389799|chromosome 9 open reading frame 171##BC050734|TTF1|7270|transcription termination factor, RNA polymerase I##BC143821|TTF1|7270|transcription termination factor, RNA polymerase I##BC127669|TTF1|7270|transcription termination factor, RNA polymerase I##BC127670|TTF1|7270|transcription termination factor, RNA polymerase I##BC143048|TTF1|7270|transcription termination factor, RNA polymerase I##BC143049|TTF1|7270|transcription termination factor, RNA polymerase I##BC062692|TTF1|7270|transcription termination factor, RNA polymerase I##BC104639|TTF1|7270|transcription termination factor, RNA polymerase I##AK225119|TTF1|7270|transcription termination factor, RNA polymerase I##AK302902|TTF1|7270|transcription termination factor, RNA polymerase I##NM_001205296|TTF1|7270|transcription termination factor, RNA polymerase I##NM_007344|TTF1|7270|transcription termination factor, RNA polymerase I##BX538166|SETX|23064|senataxin##NM_015046|SETX|23064|senataxin##AK054797|BARHL1|56751|BarH-like homeobox 1##NM_020064|BARHL1|56751|BarH-like homeobox 1##BC136956|BARHL1|56751|BarH-like homeobox 1##BC136969|BARHL1|56751|BarH-like homeobox 1##BC144433|BARHL1|56751|BarH-like homeobox 1##AF325688|BARHL1|56751|BarH-like homeobox 1##AF321618|BARHL1|56751|BarH-like homeobox 1##AK225121|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK027002|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK225350|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK304715|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC012726|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC060821|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa	0.504458	CTCF.p2:-67:0.384
chrX	24187460	24187572	reg1032443.p2	4.073	+	X59739 X59740 TSC_hg19_v1_chrX_+_24167864	-19644	+	AB209892 NM_001178086 NM_001178095 X59738 TSC_hg19_v1_chrX_+_24167845 NM_001178084 NM_001178085 NM_003410	-19724	+	TSC_hg19_v1_chrX_+_24073072 AK222577 AK290397 AK312247 AB590041 CU676476 DQ891794 DQ894977 AB451230 AB451353 L19161	-114438	+	NM_001136233	143915	-	NM_001136234	193361	+	NM_001142386 NM_005391 AK301965 TSC_hg19_v1_chrX_+_24483405 BC015948 L42452 CU677533	295941	+	X59739|ZFX|7543|zinc finger protein, X-linked##X59740|ZFX|7543|zinc finger protein, X-linked##AB209892|ZFX|7543|zinc finger protein, X-linked##NM_001178086|ZFX|7543|zinc finger protein, X-linked##NM_001178095|ZFX|7543|zinc finger protein, X-linked##X59738|ZFX|7543|zinc finger protein, X-linked##NM_001178084|ZFX|7543|zinc finger protein, X-linked##NM_001178085|ZFX|7543|zinc finger protein, X-linked##NM_003410|ZFX|7543|zinc finger protein, X-linked##AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##NM_001136233|FAM48B2|170067|family with sequence similarity 48, member B2##NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1##NM_001142386|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_005391|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AK301965|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##BC015948|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##L42452|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3	0.0	
chr14	36429190	36429283	reg1030822.p1	4.072	+	TSC_hg19_v1_chr14_+_36295599 NM_032352 AY827074 BC006250 AK297106 AK310359 AK315424	-133633	+	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	-150841	-	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	-151089	-	AB463855 CU677729 BX248287 TSC_hg19_v1_chr14_-_36789806 AF208857 BC016821 AK293473 BC005197 AB038523 AK315290 NM_001144891 NM_016586	360608	-	TSC_hg19_v1_chr14_-_36982983 BC042093 NM_001101341	553746	-	NM_003317 U33749	559666	-	NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BX248287|MBIP|51562|MAP3K12 binding inhibitory protein 1##AF208857|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC016821|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK293473|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC005197|MBIP|51562|MAP3K12 binding inhibitory protein 1##AB038523|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK315290|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_001144891|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_016586|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC042093|SFTA3|253970|surfactant associated 3##NM_001101341|SFTA3|253970|surfactant associated 3##NM_003317|NKX2-1|7080|NK2 homeobox 1##U33749|NKX2-1|7080|NK2 homeobox 1	0.0	
chr16	68790818	68790998	reg1028168.p2	4.072	+	TSC_hg19_v1_chr16_+_68771304 Z18923	-19597	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	-19663	+	BC144283 TSC_hg19_v1_chr16_+_68771216 AK290012 Z13009	-19689	+	TSC_hg19_v1_chr16_+_68877504 BC092500 AB051533 NM_024562 AB463318	86597	+	AK291400 NM_001199280	348558	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	349232	+	Z18923|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC144283|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK290012|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##Z13009|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC092500|TMCO7|79613|transmembrane and coiled-coil domains 7##AB051533|TMCO7|79613|transmembrane and coiled-coil domains 7##NM_024562|TMCO7|79613|transmembrane and coiled-coil domains 7##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3	0.0	
chr17	75437864	75437974	reg1026533.p2	4.072	+	AB023208 NM_001113494 AJ312322	-65750	+	TSC_hg19_v1_chr17_+_75369418 AK304143	-68494	+	TSC_hg19_v1_chr17_+_75369236 AJ312319 NM_001113493	-68666	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	8726	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	8863	+	AK299828 TSC_hg19_v1_chr17_+_75447450	9470	+	AB023208|SEPT9|10801|septin 9##NM_001113494|SEPT9|10801|septin 9##AJ312322|SEPT9|10801|septin 9##AK304143|SEPT9|10801|septin 9##AJ312319|SEPT9|10801|septin 9##NM_001113493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9	0.0	
chr18	29238315	29238426	reg1036441.p1	4.072	+	NM_000371 TSC_hg19_v1_chr18_+_29171839 AK312051 BC005310 BC020791 D00096 GU727633 K02091 M10605 X59498 AF162690 BT007189 CR456908 DQ778081 DQ839490 U19780	-66573	+	NM_001943 TSC_hg19_v1_chr18_+_29078205 BC099655 BC099656 BC099657 Z26317 AK308408	-160227	+	AK290367 NM_001944 M76482	-210626	+	AB024742 BC074835 BC074884 BC069620 BC069642 AF069054 AK314860 AF097159 NM_004775	26169	-	BC103999 BC104000 BC104001 AK302337 NM_001034172	102400	-	BC127109 BC127110 TSC_hg19_v1_chr18_-_29523061	284654	-	NM_000371|TTR|7276|transthyretin##AK312051|TTR|7276|transthyretin##BC005310|TTR|7276|transthyretin##BC020791|TTR|7276|transthyretin##D00096|TTR|7276|transthyretin##GU727633|TTR|7276|transthyretin##K02091|TTR|7276|transthyretin##M10605|TTR|7276|transthyretin##X59498|TTR|7276|transthyretin##AF162690|TTR|7276|transthyretin##BT007189|TTR|7276|transthyretin##CR456908|TTR|7276|transthyretin##DQ839490|TTR|7276|transthyretin##U19780|TTR|7276|transthyretin##NM_001943|DSG2|1829|desmoglein 2##BC099655|DSG2|1829|desmoglein 2##BC099656|DSG2|1829|desmoglein 2##BC099657|DSG2|1829|desmoglein 2##Z26317|DSG2|1829|desmoglein 2##AK308408|DSG2|1829|desmoglein 2##AK290367|DSG3|1830|desmoglein 3##NM_001944|DSG3|1830|desmoglein 3##M76482|DSG3|1830|desmoglein 3##AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC103999|MCART2|147407|mitochondrial carrier triple repeat 2##BC104000|MCART2|147407|mitochondrial carrier triple repeat 2##BC104001|MCART2|147407|mitochondrial carrier triple repeat 2##AK302337|MCART2|147407|mitochondrial carrier triple repeat 2##NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2##BC127109|TRAPPC8|22878|trafficking protein particle complex 8##BC127110|TRAPPC8|22878|trafficking protein particle complex 8	0.0	
chr19	47808655	47808771	reg1032357.p1	4.072	+	TSC_hg19_v1_chr19_+_47778141 BC022076 BC045749 NM_178511 BC064510	-30577	+	TSC_hg19_v1_chr19_+_47759811 BC002787 BC009743	-48895	+	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	-48952	+	BC008982 NM_001736 TSC_hg19_v1_chr19_+_47813117 M62505	4389	+	AB038237 NM_018485	31657	+	NM_014681 TSC_hg19_v1_chr19_+_47852571 AK304710	43856	+	BC022076|PRR24|255783|proline rich 24##BC045749|PRR24|255783|proline rich 24##NM_178511|PRR24|255783|proline rich 24##BC064510|PRR24|255783|proline rich 24##BC002787|CCDC9|26093|coiled-coil domain containing 9##BC009743|CCDC9|26093|coiled-coil domain containing 9##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9##BC008982|C5AR1|728|complement component 5a receptor 1##NM_001736|C5AR1|728|complement component 5a receptor 1##M62505|C5AR1|728|complement component 5a receptor 1##AB038237|GPR77|27202|G protein-coupled receptor 77##NM_018485|GPR77|27202|G protein-coupled receptor 77##NM_014681|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34##AK304710|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34	0.993787	CTCF.p2:-2:0.994
chr19	5523258	5523359	reg1034275.p1	4.072	+	AK098722 NM_181710 AK292251 BC017592	-67882	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	-182514	-	TSC_hg19_v1_chr19_+_5032899 CU687848	-490409	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	99450	-	TSC_hg19_v1_chr19_-_5622794 NM_014649	99557	-	NM_001201338 NM_001201339 NM_001201340 NM_002967 TSC_hg19_v1_chr19_+_5623093 AK294718	99764	+	AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2##NM_014649|SAFB2|9667|scaffold attachment factor B2##NM_001201338|SAFB|6294|scaffold attachment factor B##NM_001201339|SAFB|6294|scaffold attachment factor B##NM_001201340|SAFB|6294|scaffold attachment factor B##NM_002967|SAFB|6294|scaffold attachment factor B##AK294718|SAFB|6294|scaffold attachment factor B	0.090471	
chr4	8943052	8943154	reg1034856.p1	4.072	+	AB593128 M99587 NM_018942	-69606	-	U83411 TSC_hg19_v1_chr4_+_8594521	-348580	+	AK056317 NM_001014447 NM_001014448 NM_003652 BC080539 BC006393 BC018913 TSC_hg19_v1_chr4_+_8594489	-348664	+	NM_001040071	8373	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	274026	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	302500	+	M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##AK056317|CPZ|8532|carboxypeptidase Z##NM_001014447|CPZ|8532|carboxypeptidase Z##NM_001014448|CPZ|8532|carboxypeptidase Z##NM_003652|CPZ|8532|carboxypeptidase Z##BC080539|CPZ|8532|carboxypeptidase Z##BC006393|CPZ|8532|carboxypeptidase Z##BC018913|CPZ|8532|carboxypeptidase Z##NM_001040071|LOC650293|650293|seven transmembrane helix receptor##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.998366	CTCF.p2:3:0.998
chr6	129888680	129888794	reg1036972.p2	4.072	+	NM_000426 NM_001079823 Z26653	-684424	+	TSC_hg19_v1_chr6_-_128841726 Z70660 L77886 AF533875 BC140775 BC144512 BC144513 BC063596 AK295028 CR749277 NM_002844 NM_001135648	-1047081	-	AK124031 NM_001164687	-1648979	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	142589	-	NM_001010876	293678	-	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	450988	+	NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##Z70660|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##L77886|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AF533875|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC140775|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144512|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC144513|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##BC063596|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK295028|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##CR749277|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_002844|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##NM_001135648|PTPRK|5796|protein tyrosine phosphatase, receptor type, K##AK124031|THEMIS|387357|thymocyte selection associated##NM_001164687|THEMIS|387357|thymocyte selection associated##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)	0.081026	
chr7	6144368	6144527	reg1020142.p2	4.072	+	TSC_hg19_v1_chr7_-_6098822 NM_001134335 NM_014413	-45600	-	TSC_hg19_v1_chr7_-_6098807 AF255050	-45642	-	TSC_hg19_v1_chr7_-_6098780 AM392648 AM393276 CU675439 AF100784 AF183414 AL136563 AL834494 AF181071 AB037790 AF147094 AK075192 BC006524 AK290327 AK295712	-45714	-	TSC_hg19_v1_chr7_+_6144564 NM_032172 AK298164	96	+	TSC_hg19_v1_chr7_+_6144605 AK022759 AY618868 BC060846 AK309375	151	+	AB528964 DQ891736 DQ894912 EU176610 AJ223957 TSC_hg19_v1_chr7_-_6312242 AJ005197 NM_004227 AK313728 BC028717	167784	-	NM_001134335|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##NM_014413|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AF255050|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AM392648|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AM393276|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AF100784|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AF183414|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AL136563|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AL834494|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AB037790|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AF147094|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AK075192|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##BC006524|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AK290327|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##AK295712|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##NM_032172|USP42|84132|ubiquitin specific peptidase 42##AK298164|USP42|84132|ubiquitin specific peptidase 42##AK022759|USP42|84132|ubiquitin specific peptidase 42##AY618868|USP42|84132|ubiquitin specific peptidase 42##BC060846|USP42|84132|ubiquitin specific peptidase 42##AK309375|USP42|84132|ubiquitin specific peptidase 42##DQ891736|CYTH3|9265|cytohesin 3##DQ894912|CYTH3|9265|cytohesin 3##EU176610|CYTH3|9265|cytohesin 3##AJ223957|CYTH3|9265|cytohesin 3##AJ005197|CYTH3|9265|cytohesin 3##NM_004227|CYTH3|9265|cytohesin 3##AK313728|CYTH3|9265|cytohesin 3##BC028717|CYTH3|9265|cytohesin 3	0.32553	CTCF.p2:56:0.326	CTCF.p2:-108:0.453
chr8	131428198	131428378	reg1018329.p1	4.072	+	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-399405	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-399594	-	BC016345 TSC_hg19_v1_chr8_-_131028667	-399629	-	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	27743	-	NM_001115	624546	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1488069	+	AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B##NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.0	
chr8	29472222	29472322	reg1030693.p1	4.072	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-264202	-	AL137704 NM_057158	-265951	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-351658	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	468202	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	468300	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	480671	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.385699	CTCF.p2:27:0.386
chr12	93861400	93861516	reg1031114.p1	4.071	+	NM_014050 NM_172177 TSC_hg19_v1_chr12_+_93861292 AF135160 AF078860 AL136659 AK000285 AF151038 CR749344	-179	+	TSC_hg19_v1_chr12_-_93836008 NM_003348	-25434	-	TSC_hg19_v1_chr12_-_93835724 BC000396	-25720	-	NM_003877	102139	+	TSC_hg19_v1_chr12_-_93964654 AK123812	103205	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	103362	+	NM_014050|MRPL42|28977|mitochondrial ribosomal protein L42##NM_172177|MRPL42|28977|mitochondrial ribosomal protein L42##AF135160|MRPL42|28977|mitochondrial ribosomal protein L42##AF078860|MRPL42|28977|mitochondrial ribosomal protein L42##AL136659|MRPL42|28977|mitochondrial ribosomal protein L42##AK000285|MRPL42|28977|mitochondrial ribosomal protein L42##AF151038|MRPL42|28977|mitochondrial ribosomal protein L42##CR749344|MRPL42|28977|mitochondrial ribosomal protein L42##NM_003348|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC000396|UBE2N|7334|ubiquitin-conjugating enzyme E2N##NM_003877|SOCS2|8835|suppressor of cytokine signaling 2##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2	0.0	
chr16	72159619	72159709	reg1000823.p3	4.071	+	NM_001142318	-31450	-	NM_001142317	-31897	-	NM_014003 TSC_hg19_v1_chr16_+_72127745 AK301074 AK291634 AK293776 AK297269 AK311169 D86977 AK309391 BC004235 BC008340 AK297791	-31902	+	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	46379	-	AK122925 NM_001160213	46684	-	TSC_hg19_v1_chr16_+_72699031 AK021563	539400	+	NM_001142318|TXNL4B|54957|thioredoxin-like 4B##NM_001142317|TXNL4B|54957|thioredoxin-like 4B##NM_014003|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK301074|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK291634|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK293776|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK297269|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK311169|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##D86977|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK309391|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##BC004235|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##BC008340|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK297791|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	0.0	
chr17	63910937	63911118	reg1031138.p1	4.071	+	BC029524 NM_001037325	-88367	-	CR933657 TSC_hg19_v1_chr17_-_63557767	-353259	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	-353348	-	BC131805 TSC_hg19_v1_chr17_-_64188195 BC037991 NM_145036 AK299075 AK096929 NM_001199165	277154	-	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	314498	-	TSC_hg19_v1_chr17_+_64298733 BC053321	387723	+	BC029524|CEP112|201134|centrosomal protein 112kDa##NM_001037325|CEP112|201134|centrosomal protein 112kDa##CR933657|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##BC131805|CEP112|201134|centrosomal protein 112kDa##BC037991|CEP112|201134|centrosomal protein 112kDa##NM_145036|CEP112|201134|centrosomal protein 112kDa##AK299075|CEP112|201134|centrosomal protein 112kDa##AK096929|CEP112|201134|centrosomal protein 112kDa##NM_001199165|CEP112|201134|centrosomal protein 112kDa##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC053321|PRKCA|5578|protein kinase C, alpha	0.0	
chr17	79911450	79911553	reg1033516.p1	4.071	+	BC029306 NM_001145113	-6393	-	AF218000 NM_006907 NM_153824 TSC_hg19_v1_chr17_-_79895136 AK297627 BC071842 AK303852 AK225879	-16420	-	TSC_hg19_v1_chr17_+_79885722 BC101984 BC101987 BC104740 BC134411 BC046361 BC025326 BC063671	-25782	+	NM_178493 TSC_hg19_v1_chr17_-_79919064 BC060882	7561	-	TSC_hg19_v1_chr17_+_79935477 AK057403 NM_001251888 NM_024083	23947	+	TSC_hg19_v1_chr17_+_79935513 AF324219 AK290624 AK057851 BC018722 CU676290 DQ892522 DQ895734 AK226086	24021	+	BC029306|MYADML2|255275|myeloid-associated differentiation marker-like 2##NM_001145113|MYADML2|255275|myeloid-associated differentiation marker-like 2##AF218000|PYCR1|5831|pyrroline-5-carboxylate reductase 1##NM_006907|PYCR1|5831|pyrroline-5-carboxylate reductase 1##NM_153824|PYCR1|5831|pyrroline-5-carboxylate reductase 1##AK297627|PYCR1|5831|pyrroline-5-carboxylate reductase 1##BC071842|PYCR1|5831|pyrroline-5-carboxylate reductase 1##AK225879|PYCR1|5831|pyrroline-5-carboxylate reductase 1##BC134411|LOC92659|92659|uncharacterized LOC92659##BC046361|LOC92659|92659|uncharacterized LOC92659##BC025326|LOC92659|92659|uncharacterized LOC92659##BC063671|LOC92659|92659|uncharacterized LOC92659##NM_178493|NOTUM|147111|notum pectinacetylesterase homolog (Drosophila)##BC060882|NOTUM|147111|notum pectinacetylesterase homolog (Drosophila)##AK057403|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##NM_001251888|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##NM_024083|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AF324219|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK290624|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK057851|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##BC018722|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##DQ892522|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##DQ895734|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1##AK226086|ASPSCR1|79058|alveolar soft part sarcoma chromosome region, candidate 1	0.0	
chr1	90246336	90246441	reg1029814.p1	4.071	+	TSC_hg19_v1_chr1_+_90098707 AK127881 AB081509 BC103929 BC113973	-147624	+	NM_032270 TSC_hg19_v1_chr1_+_90098643	-147743	+	TSC_hg19_v1_chr1_+_90098630 BC036122	-147755	+	TSC_hg19_v1_chr1_+_90286586 NM_001134479	40139	+	TSC_hg19_v1_chr1_+_90286603 AK092238 AX747423	40211	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	41070	+	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C##AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_001134479|LRRC8D|55144|leucine rich repeat containing 8 family, member D##AK092238|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D	0.904964	CTCF.p2:12:0.905
chr20	49073154	49073249	reg1030955.p2	4.071	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	-265571	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	-265820	+	NM_005194 TSC_hg19_v1_chr20_+_48807197	-266008	+	TSC_hg19_v1_chr20_+_49126895 AK290638 NM_002827	53675	+	TSC_hg19_v1_chr20_+_49126916 AK316563	53712	+	AK299830 TSC_hg19_v1_chr20_+_49126919	53718	+	EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK290638|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##NM_002827|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK316563|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1	0.978608	CTCF.p2:10:0.979
chr20	58030852	58031014	reg1036049.p2	4.071	+	TSC_hg19_v1_chr20_+_57875665 J05081 X52001 AB590897 CU679163 BT007085 DQ096281	-155176	+	BC008876 TSC_hg19_v1_chr20_+_57875490 BC053866 NM_000114 NM_207032 NM_207033 NM_207034	-155444	+	NM_178457	-264859	+	AK098788 NM_001199505	121630	+	BC108303 AJ311122 NM_080672 TSC_hg19_v1_chr20_+_58179660 BC117362 BC117364	148721	+	AJ617581 NM_001199506 AK316047	220783	+	J05081|EDN3|1908|endothelin 3##X52001|EDN3|1908|endothelin 3##BT007085|EDN3|1908|endothelin 3##DQ096281|EDN3|1908|endothelin 3##BC008876|EDN3|1908|endothelin 3##BC053866|EDN3|1908|endothelin 3##NM_000114|EDN3|1908|endothelin 3##NM_207032|EDN3|1908|endothelin 3##NM_207033|EDN3|1908|endothelin 3##NM_207034|EDN3|1908|endothelin 3##NM_178457|ZNF831|128611|zinc finger protein 831##AK098788|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199505|PHACTR3|116154|phosphatase and actin regulator 3##BC108303|PHACTR3|116154|phosphatase and actin regulator 3##AJ311122|PHACTR3|116154|phosphatase and actin regulator 3##NM_080672|PHACTR3|116154|phosphatase and actin regulator 3##BC117362|PHACTR3|116154|phosphatase and actin regulator 3##BC117364|PHACTR3|116154|phosphatase and actin regulator 3##AJ617581|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199506|PHACTR3|116154|phosphatase and actin regulator 3##AK316047|PHACTR3|116154|phosphatase and actin regulator 3	0.0	
chr22	39861186	39861366	reg1025981.p1	4.071	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	-7740	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	-7956	+	TSC_hg19_v1_chr22_+_39795812 AK291668 AK316004 AK308903 AB591024 CU690722	-65465	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	22014	+	TSC_hg19_v1_chr22_+_39898257 NM_019008	36989	+	TSC_hg19_v1_chr22_+_39898332 AL834205	37034	+	BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK291668|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK316004|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK308903|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_019008|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL834205|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like	0.0	
chr9	112675385	112675516	reg1035327.p1	4.071	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	-132835	+	BC039306 NM_001037293 AK095003	-272381	+	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	-414861	-	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	135459	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	135513	+	NM_001136562 AK300427	212342	+	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2	0.0	
chr9	6723413	6723544	reg1034459.p2	4.071	+	AK310439 NM_001146696	-2616	+	BC111993 BC111995 M63635 D90239 M64590 AK314156 NM_000170	-77851	-	TSC_hg19_v1_chr9_+_6413338 AF274049 AB071698 EU176286 EU176602 AB385208	-310073	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	34189	+	TSC_hg19_v1_chr9_+_6757984 AB018323 AK304095 AK314355 AB037901 BC008296 AK303651 AK304032 BC104859 BC104861 BC143571	34561	+	AL137489 TSC_hg19_v1_chr9_-_7799779 BC009510 AK308643 AK128876 AK292632 NM_033428	1076237	-	AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##BC111993|GLDC|2731|glycine dehydrogenase (decarboxylating)##BC111995|GLDC|2731|glycine dehydrogenase (decarboxylating)##M63635|GLDC|2731|glycine dehydrogenase (decarboxylating)##D90239|GLDC|2731|glycine dehydrogenase (decarboxylating)##M64590|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK314156|GLDC|2731|glycine dehydrogenase (decarboxylating)##NM_000170|GLDC|2731|glycine dehydrogenase (decarboxylating)##AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C##AB018323|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304095|KDM4C|23081|lysine (K)-specific demethylase 4C##AK314355|KDM4C|23081|lysine (K)-specific demethylase 4C##AB037901|KDM4C|23081|lysine (K)-specific demethylase 4C##BC008296|KDM4C|23081|lysine (K)-specific demethylase 4C##AK303651|KDM4C|23081|lysine (K)-specific demethylase 4C##AK304032|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104859|KDM4C|23081|lysine (K)-specific demethylase 4C##BC104861|KDM4C|23081|lysine (K)-specific demethylase 4C##BC143571|KDM4C|23081|lysine (K)-specific demethylase 4C##AL137489|C9orf123|90871|chromosome 9 open reading frame 123##BC009510|C9orf123|90871|chromosome 9 open reading frame 123##AK292632|C9orf123|90871|chromosome 9 open reading frame 123##NM_033428|C9orf123|90871|chromosome 9 open reading frame 123	0.0	
chrUn_gl000222	84295	84415	reg1032787.p2	4.071	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr13	32594040	32594220	reg1008955.p2	4.070	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-173228	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-280417	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-819920	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	11311	+	BC146956 BC146965 NM_001136571	291959	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	295487	+	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset	0.0	
chr13	34088648	34088775	reg1031762.p2	4.070	+	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	-163943	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	-228844	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-308547	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	162224	-	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	303516	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	303573	+	AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa	0.18581	
chr15	73989511	73989629	reg1033098.p1	4.070	+	TSC_hg19_v1_chr15_+_73976784 AK296358 AK291721 AK309728	-12785	+	TSC_hg19_v1_chr15_+_73976732 AK298522 AK292711 AK074849	-12828	+	TSC_hg19_v1_chr15_+_73976696 AY358343	-12873	+	BC111368 NM_001039614	54245	-	BC033516 NM_153356 AB449907	176438	+	TSC_hg19_v1_chr15_+_74218789 NM_005576	229219	+	AK296358|CD276|80381|CD276 molecule##AK291721|CD276|80381|CD276 molecule##AK309728|CD276|80381|CD276 molecule##AK298522|CD276|80381|CD276 molecule##AK292711|CD276|80381|CD276 molecule##AK074849|CD276|80381|CD276 molecule##AY358343|CD276|80381|CD276 molecule##BC111368|C15orf59|388135|chromosome 15 open reading frame 59##NM_001039614|C15orf59|388135|chromosome 15 open reading frame 59##BC033516|TBC1D21|161514|TBC1 domain family, member 21##NM_153356|TBC1D21|161514|TBC1 domain family, member 21##AB449907|TBC1D21|161514|TBC1 domain family, member 21##NM_005576|LOXL1|4016|lysyl oxidase-like 1	0.0	
chr16	57075291	57075437	reg1034153.p1	4.070	+	AF389420 EF452236 TSC_hg19_v1_chr16_+_57054697	-20704	+	AK074182 NM_032206	-24379	+	TSC_hg19_v1_chr16_+_57023474 AK097030	-51904	+	TSC_hg19_v1_chr16_+_57126462 NM_152727	51101	+	TSC_hg19_v1_chr16_+_57126513 AF492484 BC053658	51144	+	TSC_hg19_v1_chr16_+_57126530 AK315394	51209	+	AF389420|NLRC5|84166|NLR family, CARD domain containing 5##EF452236|NLRC5|84166|NLR family, CARD domain containing 5##AK074182|NLRC5|84166|NLR family, CARD domain containing 5##NM_032206|NLRC5|84166|NLR family, CARD domain containing 5##AK097030|NLRC5|84166|NLR family, CARD domain containing 5##NM_152727|CPNE2|221184|copine II##AF492484|CPNE2|221184|copine II##BC053658|CPNE2|221184|copine II##AK315394|CPNE2|221184|copine II	0.0	
chr19	42023160	42023261	reg1015626.p1	4.070	+	NM_001130514	-74148	+	TSC_hg19_v1_chr19_-_41945831 AK298197 NM_001167869 NM_001167870 NM_001167871 NM_018035	-77377	-	TSC_hg19_v1_chr19_-_41945814 BC013323 AK316313	-77396	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	59367	+	D90276 AK298701 NM_001817	110224	-	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	168942	-	NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##AK298197|ATP5SL|55101|ATP5S-like##NM_001167869|ATP5SL|55101|ATP5S-like##NM_001167870|ATP5SL|55101|ATP5S-like##NM_001167871|ATP5SL|55101|ATP5S-like##NM_018035|ATP5SL|55101|ATP5S-like##BC013323|ATP5SL|55101|ATP5S-like##AK316313|ATP5SL|55101|ATP5S-like##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7	0.0	
chr4	57666003	57666183	reg1000863.p1	4.070	+	AF492675 NM_001145460 NM_032495 NM_139212	-118235	-	BC014225 AB059410 TSC_hg19_v1_chr4_-_57522645 AF492680 AF492681 NM_001145459 NM_139211	-143515	-	AB019573 AB463756 AM393649 DQ892193 EU176669 TSC_hg19_v1_chr4_-_57522247	-143936	-	CR542135 DQ895533 EU176199 TSC_hg19_v1_chr4_-_57687883 AK312222 NM_021114 X57655 BC022514 GU727622	21772	-	TSC_hg19_v1_chr4_+_57774035 NM_005612	107962	+	TSC_hg19_v1_chr4_+_57774090 BC038985 U13879 U22680	108070	+	AF492675|HOPX|84525|HOP homeobox##NM_001145460|HOPX|84525|HOP homeobox##NM_032495|HOPX|84525|HOP homeobox##NM_139212|HOPX|84525|HOP homeobox##BC014225|HOPX|84525|HOP homeobox##AB059410|HOPX|84525|HOP homeobox##AF492680|HOPX|84525|HOP homeobox##AF492681|HOPX|84525|HOP homeobox##NM_001145459|HOPX|84525|HOP homeobox##NM_139211|HOPX|84525|HOP homeobox##AB019573|HOPX|84525|HOP homeobox##AM393649|HOPX|84525|HOP homeobox##DQ892193|HOPX|84525|HOP homeobox##EU176669|HOPX|84525|HOP homeobox##CR542135|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##DQ895533|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##EU176199|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##AK312222|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##NM_021114|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##X57655|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##BC022514|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##GU727622|SPINK2|6691|serine peptidase inhibitor, Kazal type 2 (acrosin-trypsin inhibitor)##NM_005612|REST|5978|RE1-silencing transcription factor##BC038985|REST|5978|RE1-silencing transcription factor##U13879|REST|5978|RE1-silencing transcription factor	0.0	
chr6_cox_hap2	2021426	2021526	reg1031688.p1	4.070	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.95208	CTCF.p2:-17:0.952
chr7	40644695	40644783	reg1004449.p2	4.070	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-470130	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-470208	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	-470608	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	1097946	-	NM_000168	1631878	-	TSC_hg19_v1_chr7_-_42276797 AK308429	1632056	-	AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3	0.0	
chrX	10066251	10066431	reg1034163.p1	4.070	+	BC098455 NM_015691	-82548	+	NM_001195081	-130944	+	BC140866 TSC_hg19_v1_chrX_+_9754543	-311798	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	58713	+	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	469218	-	AF035360 NM_001193277 AY112903	478563	-	BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##BC140866|SHROOM2|357|shroom family member 2##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112903|MID1|4281|midline 1 (Opitz/BBB syndrome)	0.0	
chr11	123228693	123228834	reg1036874.p1	4.069	+	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	-162758	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	-162861	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	-295884	-	TSC_hg19_v1_chr11_+_123396366 AK127457	167592	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	167741	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	202210	+	AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AK127457|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B	0.0	
chr1	12107404	12107543	reg1028041.p1	4.069	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-27903	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-27939	+	FJ618905 NM_021933	-28175	+	M83554 NM_001243 BC136400 BC171762 S75768	16071	+	D86042 BC063482 NM_152942 BC073839 BC141804	78543	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	119588	+	AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr3	116736316	116736431	reg1032737.p2	4.069	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-572000	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-572042	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-1393954	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	2017160	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	2017310	-	AK097667 NM_152538 AK292387	2128524	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.0	
chr4	42406152	42406282	reg1029039.p1	4.069	+	NM_001080505	-6362	+	AB126828 AB126829 NM_001159547 NM_207406	-251323	-	TSC_hg19_v1_chr4_-_42154719 AK125953 AB463533	-251561	-	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	252871	-	AB528853 NM_001080476	489064	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	2044336	-	NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##AK125953|BEND4|389206|BEN domain containing 4##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8	0.14127	
chr6	162082029	162082142	reg1032447.p1	4.069	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	-387025	-	AK094629 TSC_hg19_v1_chr6_-_161413451	-668672	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-669227	+	AK057286 NM_001080378 NM_152410 BC044227	1066084	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	1066642	-	TSC_hg19_v1_chr6_-_163148797 AB245403 AK292590 BC022014	1066693	-	AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB245403|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AK292590|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##BC022014|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.017787	
chr7	47128732	47128799	reg1004617.p2	4.069	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-1167959	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-1195631	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-1200660	+	TSC_hg19_v1_chr7_-_47579207 BC071791	450444	-	TSC_hg19_v1_chr7_-_47621681 CR749644	492898	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	493018	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.0	
chr7	948809	948989	reg1001909.p2	4.069	+	TSC_hg19_v1_chr7_+_916249 BC003550 AK023560 AF132954	-32629	+	TSC_hg19_v1_chr7_+_916188 NM_015949	-32696	+	BC142707 NM_001130965 AB463335 CU680640	-76751	+	AK300644 AK300859 TSC_hg19_v1_chr7_-_960513	11615	-	TSC_hg19_v1_chr7_-_994129 AB587419 BC033747	45216	-	TSC_hg19_v1_chr7_-_994317 NM_006869	45414	-	BC003550|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK023560|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AF132954|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##NM_015949|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##BC142707|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001130965|SUN1|23353|Sad1 and UNC84 domain containing 1##AK300644|ADAP1|11033|ArfGAP with dual PH domains 1##AK300859|ADAP1|11033|ArfGAP with dual PH domains 1##BC033747|ADAP1|11033|ArfGAP with dual PH domains 1##NM_006869|ADAP1|11033|ArfGAP with dual PH domains 1	0.0	
chrX	152601758	152601938	reg1037118.p2	4.069	+	TSC_hg19_v1_chrX_+_152599610 AK122976 NM_001080485	-2239	+	AY148486 EU161102 BC017555 AK314979 NM_004988	-115754	-	NM_032882 NM_001242319	-355835	-	NM_001136273	81932	+	NM_080701	110096	-	CU675933 TSC_hg19_v1_chrX_-_152736028 AF267739 AK302066 AK300650 AF319570 AF319571 AF319572 AF319573 AB464338 AM393157 DQ891762 DQ894946 BC008141	134203	-	AK122976|ZNF275|10838|zinc finger protein 275##NM_001080485|ZNF275|10838|zinc finger protein 275##AY148486|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##EU161102|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##BC017555|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##AK314979|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##NM_004988|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##NM_032882|PNMA6A|84968|paraneoplastic antigen like 6A##NM_001242319|PNMA6D|100287466|paraneoplastic antigen like 6D##NM_001136273|ZFP92|139735|zinc finger protein 92 homolog (mouse)##NM_080701|TREX2|11219|three prime repair exonuclease 2##AF267739|HAUS7|55559|HAUS augmin-like complex, subunit 7##AK302066|HAUS7|55559|HAUS augmin-like complex, subunit 7##AK300650|HAUS7|55559|HAUS augmin-like complex, subunit 7##AM393157|HAUS7|55559|HAUS augmin-like complex, subunit 7##DQ891762|TREX2|11219|three prime repair exonuclease 2##DQ894946|HAUS7|55559|HAUS augmin-like complex, subunit 7##BC008141|HAUS7|55559|HAUS augmin-like complex, subunit 7	0.015739	
chr12	51318232	51318311	reg1031510.p2	4.068	+	NM_182559 BC035123 BC048112 CU690554	-81548	+	TSC_hg19_v1_chr12_+_51158275 AK299240	-160013	+	TSC_hg19_v1_chr12_+_51157883 NM_005171 AK313406 BC029619	-160393	+	TSC_hg19_v1_chr12_+_51318519 NM_014033	253	+	TSC_hg19_v1_chr12_+_51318801 AY358797 AK024409 AK307071 AK225689 AK225595 AK023693 AK293356 AJ536233 BC008180 BC004492 AB590800 EU832657 EU832734 AL050159 AF113007	530	+	NM_001109619	29510	+	NM_182559|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC035123|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC048112|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##AK299240|ATF1|466|activating transcription factor 1##NM_005171|ATF1|466|activating transcription factor 1##AK313406|ATF1|466|activating transcription factor 1##BC029619|ATF1|466|activating transcription factor 1##NM_014033|METTL7A|25840|methyltransferase like 7A##AY358797|METTL7A|25840|methyltransferase like 7A##AK024409|METTL7A|25840|methyltransferase like 7A##AK307071|METTL7A|25840|methyltransferase like 7A##AK225689|METTL7A|25840|methyltransferase like 7A##AK225595|METTL7A|25840|methyltransferase like 7A##AK023693|METTL7A|25840|methyltransferase like 7A##AK293356|METTL7A|25840|methyltransferase like 7A##AJ536233|METTL7A|25840|methyltransferase like 7A##BC008180|METTL7A|25840|methyltransferase like 7A##BC004492|METTL7A|25840|methyltransferase like 7A##EU832657|METTL7A|25840|methyltransferase like 7A##EU832734|METTL7A|25840|methyltransferase like 7A##AL050159|METTL7A|25840|methyltransferase like 7A##AF113007|METTL7A|25840|methyltransferase like 7A##NM_001109619|HIGD1C|613227|HIG1 hypoxia inducible domain family, member 1C	0.0	
chr15	34021981	34022110	reg1033321.p2	4.068	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	-418876	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-661810	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-1010879	-	TSC_hg19_v1_chr15_-_34212524 BC037796	190513	-	AK095198 NM_012125	239043	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	309267	-	AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor	0.77123	CTCF.p2:-9:0.771
chr19	36806225	36806327	reg1034360.p1	4.068	+	TSC_hg19_v1_chr19_+_36727378 AB464376 AK311486	-78924	+	AK313460 TSC_hg19_v1_chr19_+_36726957	-79356	+	TSC_hg19_v1_chr19_+_36706007 BC065568 BC005154 BC016795	-100217	+	TSC_hg19_v1_chr19_-_36822604 BC041949	16352	-	TSC_hg19_v1_chr19_-_36870093 AK293103 NM_020917	63816	-	TSC_hg19_v1_chr19_-_36909491 AK315709 GU388429 AL834267 NM_133466 AK074942	103245	-	AK311486|ZNF146|7705|zinc finger protein 146##AK313460|ZNF146|7705|zinc finger protein 146##BC065568|ZNF146|7705|zinc finger protein 146##BC005154|ZNF146|7705|zinc finger protein 146##BC041949|LOC100506930|100506930|uncharacterized LOC100506930##AK293103|ZFP14|57677|zinc finger protein 14 homolog (mouse)##NM_020917|ZFP14|57677|zinc finger protein 14 homolog (mouse)##AK315709|ZFP82|284406|zinc finger protein 82 homolog (mouse)##GU388429|ZFP82|284406|zinc finger protein 82 homolog (mouse)##AL834267|ZFP82|284406|zinc finger protein 82 homolog (mouse)##NM_133466|ZFP82|284406|zinc finger protein 82 homolog (mouse)##AK074942|ZFP82|284406|zinc finger protein 82 homolog (mouse)	0.975902	CTCF.p2:-8:0.976
chr19	39902770	39902906	reg1003919.p2	4.068	+	TSC_hg19_v1_chr19_+_39899749 AJ227917	-3045	+	TSC_hg19_v1_chr19_+_39897486 AK314042 M92843 NM_003407 BC009693 M63625 EU446714 EU832179 EU832272 CU679443	-5064	+	TSC_hg19_v1_chr19_+_39882046 AL137304 AK000411 AK298014 BC019015 AK092909 AX747802 AK124629 AK316010 AK090877 AK297772 AX746660 AK294667	-20800	+	AK024429 NM_022835	911	+	CU678668 CU687136 DQ893449 DQ896219 TSC_hg19_v1_chr19_-_39926589 BC024970 BC007977 BC071674 M60854 BC095429 BC004324 AK055869 AK315498 D28392 NM_001020	23738	-	NM_001111020 NM_001130824 NM_001130825 TSC_hg19_v1_chr19_+_39936212 AB000516	33360	+	AK314042|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##M92843|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##NM_003407|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##BC009693|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##M63625|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU446714|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU832179|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU832272|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##AL137304|MED29|55588|mediator complex subunit 29##AK000411|MED29|55588|mediator complex subunit 29##AK298014|MED29|55588|mediator complex subunit 29##BC019015|MED29|55588|mediator complex subunit 29##AK092909|MED29|55588|mediator complex subunit 29##AK124629|MED29|55588|mediator complex subunit 29##AK316010|MED29|55588|mediator complex subunit 29##AK090877|MED29|55588|mediator complex subunit 29##AK297772|MED29|55588|mediator complex subunit 29##AK294667|MED29|55588|mediator complex subunit 29##AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2##NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2##DQ893449|RPS16|6217|ribosomal protein S16##DQ896219|RPS16|6217|ribosomal protein S16##BC024970|RPS16|6217|ribosomal protein S16##BC007977|RPS16|6217|ribosomal protein S16##BC071674|RPS16|6217|ribosomal protein S16##M60854|RPS16|6217|ribosomal protein S16##BC095429|RPS16|6217|ribosomal protein S16##BC004324|RPS16|6217|ribosomal protein S16##AK055869|RPS16|6217|ribosomal protein S16##AK315498|RPS16|6217|ribosomal protein S16##D28392|RPS16|6217|ribosomal protein S16##NM_001020|RPS16|6217|ribosomal protein S16##NM_001111020|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##NM_001130824|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##NM_001130825|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##AB000516|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)	0.0	
chr2	178129597	178129751	reg1004939.p4	4.068	+	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	-298	-	AK311688 NM_001145412 NM_001145413	-1103	-	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	-52200	+	AK314816 NM_006164	184	-	TSC_hg19_v1_chr2_-_178257411 BC093095 AL833088 AK126517	127733	-	AK309714 TSC_hg19_v1_chr2_+_178257487 NM_003659	127755	+	S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK314816|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_006164|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##AL833088|LOC100130691|100130691|uncharacterized LOC100130691##AK126517|LOC100130691|100130691|uncharacterized LOC100130691##AK309714|AGPS|8540|alkylglycerone phosphate synthase##NM_003659|AGPS|8540|alkylglycerone phosphate synthase	0.0	
chr3	119337897	119338016	reg1024053.p2	4.068	+	NM_001206960 NM_001206961 NM_015900 AK301880 AK222705 AK313519 BC035347 BC047703 U37591 AF035268 AF035269 AB527604 CU690470	-21229	+	BC063883 NM_001125 TSC_hg19_v1_chr3_+_119298606	-39391	+	TSC_hg19_v1_chr3_+_119298355 AK304560 AK291787	-39561	+	CU692240 AF204173 NM_022135 AK314819 BC044929	41396	-	TSC_hg19_v1_chr3_-_119396232 AK312143 BC105280 BC010933 L77701 NM_005694 BC108317	58290	-	TSC_hg19_v1_chr3_+_119421876 AF440403 BC035248 CR749242 NM_033364 AF497717 AK055558 BC126394 AK302699 AK309317 AK294413 AK303997 AK289914 HQ258654	83946	+	NM_001206960|PLA1A|51365|phospholipase A1 member A##NM_001206961|PLA1A|51365|phospholipase A1 member A##NM_015900|PLA1A|51365|phospholipase A1 member A##AK301880|PLA1A|51365|phospholipase A1 member A##AK222705|PLA1A|51365|phospholipase A1 member A##AK313519|PLA1A|51365|phospholipase A1 member A##BC035347|PLA1A|51365|phospholipase A1 member A##BC047703|PLA1A|51365|phospholipase A1 member A##U37591|PLA1A|51365|phospholipase A1 member A##AF035268|PLA1A|51365|phospholipase A1 member A##AF035269|PLA1A|51365|phospholipase A1 member A##BC063883|ADPRH|141|ADP-ribosylarginine hydrolase##NM_001125|ADPRH|141|ADP-ribosylarginine hydrolase##AK304560|ADPRH|141|ADP-ribosylarginine hydrolase##AK291787|ADPRH|141|ADP-ribosylarginine hydrolase##AF204173|POPDC2|64091|popeye domain containing 2##NM_022135|POPDC2|64091|popeye domain containing 2##AK314819|POPDC2|64091|popeye domain containing 2##BC044929|POPDC2|64091|popeye domain containing 2##AK312143|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC105280|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC010933|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##L77701|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_005694|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC108317|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##AF440403|C3orf15|89876|chromosome 3 open reading frame 15##BC035248|C3orf15|89876|chromosome 3 open reading frame 15##CR749242|C3orf15|89876|chromosome 3 open reading frame 15##NM_033364|C3orf15|89876|chromosome 3 open reading frame 15##AF497717|C3orf15|89876|chromosome 3 open reading frame 15##AK055558|C3orf15|89876|chromosome 3 open reading frame 15##BC126394|C3orf15|89876|chromosome 3 open reading frame 15##AK302699|C3orf15|89876|chromosome 3 open reading frame 15##AK309317|C3orf15|89876|chromosome 3 open reading frame 15##AK294413|C3orf15|89876|chromosome 3 open reading frame 15##AK303997|C3orf15|89876|chromosome 3 open reading frame 15##AK289914|C3orf15|89876|chromosome 3 open reading frame 15##HQ258654|C3orf15|89876|chromosome 3 open reading frame 15	0.406862	CTCF.p2:-30:0.407
chr3	191848466	191848575	reg1032196.p1	4.068	+	AY858112 NM_001083308	-669569	+	AK090630 AX746546 NM_198152	-800196	-	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	-801354	+	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	278323	-	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	596845	-	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	787116	-	AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2	0.992231	CTCF.p2:-9:0.992
chr10	20106277	20106427	reg1031595.p1	4.067	+	TSC_hg19_v1_chr10_+_20105360 AK304591 AY358486 NM_032812	-979	+	TSC_hg19_v1_chr10_+_18948359 NM_178815 BC024163 AK027275 AF494061 DQ893166 DQ896464	-1157931	+	BC033534 TSC_hg19_v1_chr10_-_18948215	-1158155	-	NM_006393 Y16241	1080178	-	BC140744 BC144447 NM_001010896 NM_001177483	1329135	-	AB209311 TSC_hg19_v1_chr10_-_21462987	1356635	-	AK304591|PLXDC2|84898|plexin domain containing 2##AY358486|PLXDC2|84898|plexin domain containing 2##NM_032812|PLXDC2|84898|plexin domain containing 2##NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B##BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B##AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B##AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B##NM_006393|NEBL|10529|nebulette##Y16241|NEBL|10529|nebulette##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113##AB209311|NEBL|10529|nebulette	0.227126	CTCF.p2:3:0.227
chr1	150539900	150540081	reg1032643.p2	4.067	+	TSC_hg19_v1_chr1_+_150521883 AF289612 NM_019032 NM_025008	-18136	+	AK292435 TSC_hg19_v1_chr1_+_150480584 AK301369 AK316390 AK302279 U65932 DQ893011 DQ896257	-59356	+	NM_001202858 NM_004425 NM_022664 TSC_hg19_v1_chr1_+_150480582 AK097205 AK097046 BC023505 DQ010946 DQ112074 U68186 U68187	-59456	+	AB385142 AF203373 BT006640 CU677857 DQ890628 DQ893795 FJ917536 TSC_hg19_v1_chr1_-_150552076 AF118124 BC017197 BC071897 L08246 AK300499 BC107735 AK294462	12050	-	TSC_hg19_v1_chr1_-_150552077 AK316267 AK297217 AK304775 AK312508	12091	-	TSC_hg19_v1_chr1_-_150552129 NM_001197320 NM_021960 NM_182763	12180	-	AF289612|ADAMTSL4|54507|ADAMTS-like 4##NM_019032|ADAMTSL4|54507|ADAMTS-like 4##NM_025008|ADAMTSL4|54507|ADAMTS-like 4##AK292435|ECM1|1893|extracellular matrix protein 1##AK301369|ECM1|1893|extracellular matrix protein 1##AK316390|ECM1|1893|extracellular matrix protein 1##AK302279|ECM1|1893|extracellular matrix protein 1##U65932|ECM1|1893|extracellular matrix protein 1##DQ893011|ECM1|1893|extracellular matrix protein 1##DQ896257|ECM1|1893|extracellular matrix protein 1##NM_001202858|ECM1|1893|extracellular matrix protein 1##NM_004425|ECM1|1893|extracellular matrix protein 1##NM_022664|ECM1|1893|extracellular matrix protein 1##AK097205|ECM1|1893|extracellular matrix protein 1##AK097046|ECM1|1893|extracellular matrix protein 1##BC023505|ECM1|1893|extracellular matrix protein 1##U68186|ECM1|1893|extracellular matrix protein 1##U68187|ECM1|1893|extracellular matrix protein 1##AF203373|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BT006640|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##DQ890628|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##DQ893795|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##FJ917536|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AF118124|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC017197|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC071897|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##L08246|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK300499|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC107735|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK294462|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK316267|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK297217|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK304775|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK312508|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_001197320|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_021960|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_182763|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)	0.0	
chr12	26340534	26340616	reg1031380.p1	4.067	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	-62654	-	NM_001164746 AK292333	-135082	+	AK290055 NM_001164747	-213888	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	7716	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	8010	+	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	645505	-	AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_001164746|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AK292333|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AK290055|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_001164747|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2	0.200758	
chr14	46409664	46409795	reg1029678.p2	4.067	+	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-687083	-	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	-687362	-	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-804540	+	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	711254	-	BC028193 NM_182830	1402686	-	AK309211 NM_001113498	1734427	-	AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	0.335022	CTCF.p2:-2:0.335
chr14	93673616	93673695	reg1028446.p1	4.067	+	TSC_hg19_v1_chr14_+_93673628 AB590826 BC051819 BX248249	-21	+	BC017013 TSC_hg19_v1_chr14_+_93673625	-31	+	TSC_hg19_v1_chr14_+_93673600 BC015046 AK315492	-59	+	TSC_hg19_v1_chr14_-_93799368 AB040958 AK001510	125710	-	TSC_hg19_v1_chr14_-_93799376 AK291422 BC141850 BX248762 NM_001002860 NM_018167 BC047071	125749	-	AK125327 NM_020818	125909	+	BC051819|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BX248249|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BC017013|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BC015046|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##AK315492|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##AB040958|BTBD7|55727|BTB (POZ) domain containing 7##AK001510|BTBD7|55727|BTB (POZ) domain containing 7##AK291422|BTBD7|55727|BTB (POZ) domain containing 7##BC141850|BTBD7|55727|BTB (POZ) domain containing 7##BX248762|BTBD7|55727|BTB (POZ) domain containing 7##NM_001002860|BTBD7|55727|BTB (POZ) domain containing 7##NM_018167|BTBD7|55727|BTB (POZ) domain containing 7##BC047071|BTBD7|55727|BTB (POZ) domain containing 7##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)	0.0	
chr19	12273912	12273992	reg1026561.p1	4.067	+	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	-43	+	BC007868 AK096560 AK292455 NM_145233 TSC_hg19_v1_chr19_-_12267555	-6406	-	AL080125 AK023094 BC036714 TSC_hg19_v1_chr19_-_12251166 NM_001203250 NM_021143	-22796	-	AK023304 TSC_hg19_v1_chr19_+_12305836	31881	+	TSC_hg19_v1_chr19_+_12305871 AK093188 AX721123	31954	+	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	131700	-	NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136##BC007868|ZNF625|90589|zinc finger protein 625##AK096560|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##AK292455|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##NM_145233|ZNF625|90589|zinc finger protein 625##AL080125|ZNF20|7568|zinc finger protein 20##AK023094|ZNF20|7568|zinc finger protein 20##BC036714|ZNF20|7568|zinc finger protein 20##NM_001203250|ZNF20|7568|zinc finger protein 20##NM_021143|ZNF20|7568|zinc finger protein 20##AK023304|LOC100289333|100289333|uncharacterized LOC100289333##BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44	0.0	
chr19	13319109	13319249	reg1030262.p2	4.067	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-54999	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-57887	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-58040	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	297997	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	523400	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	539540	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.0	
chr19	14714962	14715105	reg1032577.p2	4.067	+	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	-21119	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	-32184	-	TSC_hg19_v1_chr19_+_14640435 AK001416 AK315412 BC007801 BC013881 BC005952 AF038958 BC002425 BC034484 AF222742 AX771269 AF038959 AB529027 DQ891949 DQ895135 EU832830 GQ129437	-74574	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	70644	-	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	85731	+	BC082991 AF114491 AK301458 AK222891 AK298700 TSC_hg19_v1_chr19_-_14887654	172605	-	NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AK001416|TECR|9524|trans-2,3-enoyl-CoA reductase##AK315412|TECR|9524|trans-2,3-enoyl-CoA reductase##BC007801|TECR|9524|trans-2,3-enoyl-CoA reductase##BC013881|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005952|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038958|TECR|9524|trans-2,3-enoyl-CoA reductase##BC002425|TECR|9524|trans-2,3-enoyl-CoA reductase##BC034484|TECR|9524|trans-2,3-enoyl-CoA reductase##AF222742|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038959|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ891949|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ895135|TECR|9524|trans-2,3-enoyl-CoA reductase##EU832830|TECR|9524|trans-2,3-enoyl-CoA reductase##GQ129437|TECR|9524|trans-2,3-enoyl-CoA reductase##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333##BC082991|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AF114491|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK301458|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK222891|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK298700|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2	0.0	
chr22	47184432	47184539	reg1035639.p1	4.067	+	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	-25885	+	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	-50330	-	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	-50406	-	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	843018	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	1700795	+	AK125256 NM_015381 AK123443 AY358847	1787676	+	NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##AK093107|LOC284930|284930|uncharacterized LOC284930##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	0.0	
chr2	30455341	30455410	reg1040911.p1	4.067	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-873	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-85499	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	-85542	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	214773	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	574918	-	AK122747 NM_001253827	897122	-	AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.0	
chr5	131808683	131808864	reg1037214.p1	4.067	+	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-62145	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-103265	+	BX538252 TSC_hg19_v1_chr5_-_131705330	-103474	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	17708	-	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	70419	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	83867	+	AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BX538252|LOC553103|553103|uncharacterized LOC553103##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)	0.0	
chr5	140792634	140792719	reg1004264.p2	4.067	+	TSC_hg19_v1_chr5_+_140792580 BC014509 BC093873 BC093875 AF152319 AF152503 NM_018913 NM_032090	-52	+	AF152335 AF152522 NM_018926 NM_032100	-4907	+	TSC_hg19_v1_chr5_+_140782367 BC132769 AF152329 AF152516 NM_018921 NM_032089	-10233	+	TSC_hg19_v1_chr5_+_140797217 NM_032101	4540	+	TSC_hg19_v1_chr5_+_140797246 NM_018927	4575	+	TSC_hg19_v1_chr5_+_140797279 AF152336 AF152523	4672	+	BC014509|PCDHGA10|56106|protocadherin gamma subfamily A, 10##BC093873|PCDHGA10|56106|protocadherin gamma subfamily A, 10##BC093875|PCDHGA10|56106|protocadherin gamma subfamily A, 10##AF152319|PCDHGA10|56106|protocadherin gamma subfamily A, 10##AF152503|PCDHGA10|56106|protocadherin gamma subfamily A, 10##NM_018913|PCDHGA10|56106|protocadherin gamma subfamily A, 10##NM_032090|PCDHGA10|56106|protocadherin gamma subfamily A, 10##AF152335|PCDHGB6|56100|protocadherin gamma subfamily B, 6##AF152522|PCDHGB6|56100|protocadherin gamma subfamily B, 6##NM_018926|PCDHGB6|56100|protocadherin gamma subfamily B, 6##NM_032100|PCDHGB6|56100|protocadherin gamma subfamily B, 6##BC132769|PCDHGA9|56107|protocadherin gamma subfamily A, 9##AF152329|PCDHGA9|56107|protocadherin gamma subfamily A, 9##AF152516|PCDHGA9|56107|protocadherin gamma subfamily A, 9##NM_018921|PCDHGA9|56107|protocadherin gamma subfamily A, 9##NM_032089|PCDHGA9|56107|protocadherin gamma subfamily A, 9##NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7##NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7##AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7##AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7	0.0	
chrX	136276441	136276539	reg1035919.p2	4.067	+	BC069439 NM_054021 CU686814	-162655	-	TSC_hg19_v1_chrX_+_135991587 AK055694	-284934	+	TSC_hg19_v1_chrX_-_135962939 NM_001164803 NM_002139	-313555	-	TSC_hg19_v1_chrX_+_136648313 AF028706 NM_003413	371839	+	EU532020 TSC_hg19_v1_chrX_+_136648691 BC113393 BC113395 AB464363 HQ258447	372277	+	AF100143 TSC_hg19_v1_chrX_-_137793504 AK289960 BC034340	1516964	-	BC069439|GPR101|83550|G protein-coupled receptor 101##NM_054021|GPR101|83550|G protein-coupled receptor 101##NM_001164803|RBMX|27316|RNA binding motif protein, X-linked##NM_002139|RBMX|27316|RNA binding motif protein, X-linked##AF028706|ZIC3|7547|Zic family member 3##NM_003413|ZIC3|7547|Zic family member 3##EU532020|ZIC3|7547|Zic family member 3##BC113393|ZIC3|7547|Zic family member 3##BC113395|ZIC3|7547|Zic family member 3##HQ258447|ZIC3|7547|Zic family member 3##AF100143|FGF13|2258|fibroblast growth factor 13##AK289960|FGF13|2258|fibroblast growth factor 13##BC034340|FGF13|2258|fibroblast growth factor 13	0.683041	CTCF.p2:7:0.683
chr10	6020007	6020126	reg1032133.p1	4.066	+	AF035279 BC107777 BC065506 NM_001243539	-52	-	CR542023 HQ401283 AB590464 BC121140 AK304211 BC074726 BC121141 U31628 NM_002189 NM_172200	-553	-	AF380349 NM_032807	-83718	+	AB528862 AK223313 K03122 X01057 AK313847 NM_000417	84156	-	TSC_hg19_v1_chr10_+_6130954 NM_032905	110883	+	TSC_hg19_v1_chr10_+_6131024 AF542550 AK314952	110933	+	AF035279|IL15RA|3601|interleukin 15 receptor, alpha##BC107777|IL15RA|3601|interleukin 15 receptor, alpha##BC065506|IL15RA|3601|interleukin 15 receptor, alpha##NM_001243539|IL15RA|3601|interleukin 15 receptor, alpha##CR542023|IL15RA|3601|interleukin 15 receptor, alpha##HQ401283|IL15RA|3601|interleukin 15 receptor, alpha##BC121140|IL15RA|3601|interleukin 15 receptor, alpha##AK304211|IL15RA|3601|interleukin 15 receptor, alpha##BC074726|IL15RA|3601|interleukin 15 receptor, alpha##BC121141|IL15RA|3601|interleukin 15 receptor, alpha##U31628|IL15RA|3601|interleukin 15 receptor, alpha##NM_002189|IL15RA|3601|interleukin 15 receptor, alpha##NM_172200|IL15RA|3601|interleukin 15 receptor, alpha##AF380349|FBXO18|84893|F-box protein, helicase, 18##NM_032807|FBXO18|84893|F-box protein, helicase, 18##AK223313|IL2RA|3559|interleukin 2 receptor, alpha##K03122|IL2RA|3559|interleukin 2 receptor, alpha##X01057|IL2RA|3559|interleukin 2 receptor, alpha##AK313847|IL2RA|3559|interleukin 2 receptor, alpha##NM_000417|IL2RA|3559|interleukin 2 receptor, alpha##NM_032905|RBM17|84991|RNA binding motif protein 17##AF542550|RBM17|84991|RNA binding motif protein 17##AK314952|RBM17|84991|RNA binding motif protein 17	0.988105	CTCF.p2:12:0.988
chr10	79596313	79596448	reg1037321.p2	4.066	+	BC009695 AK098326 TSC_hg19_v1_chr10_-_79397567 BC062659 BC024965 NM_001014797 NM_001161352 NM_001161353 NM_002247	-198817	-	U13913 BC137115 BC137137 BC144496 CR627384 TSC_hg19_v1_chr10_-_79397499	-198894	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	-198974	-	TSC_hg19_v1_chr10_-_79628871 BC117695	32529	-	AB384502 NM_004747 AB011155 BC146794 TSC_hg19_v1_chr10_-_79686514	90022	-	AF021351 AY091459 AB384941 TSC_hg19_v1_chr10_-_79789272 BC041089 AK300329	192841	-	BC009695|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC062659|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC024965|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001014797|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161352|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161353|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_002247|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)##NM_004747|DLG5|9231|discs, large homolog 5 (Drosophila)##AB011155|DLG5|9231|discs, large homolog 5 (Drosophila)##BC146794|DLG5|9231|discs, large homolog 5 (Drosophila)##AF021351|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AY091459|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC041089|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AK300329|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa	0.0	
chr12	48232306	48232402	reg1003282.p3	4.066	+	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	-18690	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-65320	+	AK092448 NM_001098531	-79480	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	66447	-	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	124984	+	TSC_hg19_v1_chr12_+_48357387 AK310035 AK313698 AK299154 BC107792	125066	+	AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C##AK310035|TMEM106C|79022|transmembrane protein 106C##AK313698|TMEM106C|79022|transmembrane protein 106C##AK299154|TMEM106C|79022|transmembrane protein 106C##BC107792|TMEM106C|79022|transmembrane protein 106C	0.0	
chr14	92726402	92726526	reg1029188.p1	4.066	+	TSC_hg19_v1_chr14_+_92588315 BC060854 AK001912 AK001627 BC070095	-138138	+	TSC_hg19_v1_chr14_+_92588292 NM_017437	-138172	+	TSC_hg19_v1_chr14_-_92588066 BC104672 AB463916 HQ258048 BC126232 BC126234 NM_004545	-138356	-	AF520706 NM_153648	62460	+	AK295059 NM_153647	63072	+	NM_153646 AF520704 AF520705 BC069653	63712	+	BC060854|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##AK001912|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##AK001627|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##BC070095|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##NM_017437|CPSF2|53981|cleavage and polyadenylation specific factor 2, 100kDa##BC104672|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##HQ258048|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##BC126232|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##BC126234|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##NM_004545|NDUFB1|4707|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa##AF520706|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153648|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	0.028922	
chr17	78851422	78851563	reg1030422.p2	4.066	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-332674	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-332843	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-401165	-	TSC_hg19_v1_chr17_+_78935064 BC073898	83640	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	114149	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	114202	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.0	
chr19	6544010	6544190	reg1027966.p2	4.066	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	-13074	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-41783	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-62317	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	46932	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	47006	-	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	47058	-	NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule	0.0	
chr2	61362735	61362862	reg1035996.p1	4.066	+	BC070104 NM_032506	-69436	+	TSC_hg19_v1_chr2_+_61293053 AL833595 BX647395	-69720	+	TSC_hg19_v1_chr2_+_61293005 AK131267 NM_001129993 BC039298 AK309749	-69781	+	TSC_hg19_v1_chr2_+_61372246 NM_001143960 BC014578	9441	+	NM_001143959	26830	+	TSC_hg19_v1_chr2_+_61404606 BC030998 NM_152392 BC050395	41785	+	BC070104|KIAA1841|84542|KIAA1841##NM_032506|KIAA1841|84542|KIAA1841##AL833595|KIAA1841|84542|KIAA1841##BX647395|KIAA1841|84542|KIAA1841##AK131267|KIAA1841|84542|KIAA1841##NM_001129993|KIAA1841|84542|KIAA1841##BC039298|KIAA1841|84542|KIAA1841##AK309749|KIAA1841|84542|KIAA1841##NM_001143960|C2orf74|339804|chromosome 2 open reading frame 74##BC014578|C2orf74|339804|chromosome 2 open reading frame 74##NM_001143959|C2orf74|339804|chromosome 2 open reading frame 74##BC030998|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##NM_152392|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##BC050395|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)	0.024815	
chr5	142403446	142403586	reg1031163.p2	4.066	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-253208	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-253544	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-325945	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	379307	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	379590	-	BC015610 TSC_hg19_v1_chr5_-_142783214	379695	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr5	73198748	73198881	reg1005128.p2	4.066	+	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	-89464	+	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	-276829	+	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	-337232	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	737649	-	AK096578 NM_003633	738434	-	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	782194	+	AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)	0.0	
chr8	135844849	135845029	reg1032940.p2	4.066	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-119665	-	TSC_hg19_v1_chr8_-_135725053 AB463359	-119860	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	-136145	-	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	624719	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	625262	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	3664167	-	BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B	0.0	
chrX	105279229	105279332	reg1031781.p1	4.066	+	TSC_hg19_v1_chrX_+_105066559 AK131549	-212714	+	TSC_hg19_v1_chrX_+_105066535 BX538345 NM_198465 BC108702	-212742	+	BC108734 AF285597 BC042547 NM_031274	-813927	-	TSC_hg19_v1_chrX_-_105282719 AK310778 NM_000354	3449	-	BC031229 NM_001171020 NM_152423	133017	+	NM_001184782 NM_018015 TSC_hg19_v1_chrX_+_105855208 BC047503 AK001040 BC070110 AK291730 BC011483 BC033709 BC054032 CU687040 CU689708	575954	+	AK131549|NRK|203447|Nik related kinase##BX538345|NRK|203447|Nik related kinase##NM_198465|NRK|203447|Nik related kinase##BC108702|NRK|203447|Nik related kinase##BC108734|TEX13A|56157|testis expressed 13A##AF285597|TEX13A|56157|testis expressed 13A##BC042547|TEX13A|56157|testis expressed 13A##NM_031274|TEX13A|56157|testis expressed 13A##AK310778|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##NM_000354|SERPINA7|6906|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7##BC031229|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_001171020|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_152423|MUM1L1|139221|melanoma associated antigen (mutated) 1-like 1##NM_001184782|CXorf57|55086|chromosome X open reading frame 57##NM_018015|CXorf57|55086|chromosome X open reading frame 57##BC047503|CXorf57|55086|chromosome X open reading frame 57##AK001040|CXorf57|55086|chromosome X open reading frame 57##BC070110|CXorf57|55086|chromosome X open reading frame 57##AK291730|CXorf57|55086|chromosome X open reading frame 57##BC011483|CXorf57|55086|chromosome X open reading frame 57##BC033709|CXorf57|55086|chromosome X open reading frame 57##BC054032|CXorf57|55086|chromosome X open reading frame 57	0.246148	CTCF.p2:-20:0.206
chr1	116775903	116776017	reg1005453.p2	4.065	+	AK096035 NM_152367	-121585	+	TSC_hg19_v1_chr1_+_116519194 BC070033 AY358258 AY145501 CU693234 DQ892367 DQ895576	-256731	+	NM_018420 BC026358 TSC_hg19_v1_chr1_+_116519161	-256817	+	NM_000701 TSC_hg19_v1_chr1_+_116915824	139851	+	BC003077 TSC_hg19_v1_chr1_+_116915881 BC050359	139922	+	TSC_hg19_v1_chr1_+_116915952 AK314777	139988	+	AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)##BC070033|SLC22A15|55356|solute carrier family 22, member 15##AY358258|SLC22A15|55356|solute carrier family 22, member 15##AY145501|SLC22A15|55356|solute carrier family 22, member 15##DQ892367|SLC22A15|55356|solute carrier family 22, member 15##DQ895576|SLC22A15|55356|solute carrier family 22, member 15##NM_018420|SLC22A15|55356|solute carrier family 22, member 15##BC026358|SLC22A15|55356|solute carrier family 22, member 15##NM_000701|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC003077|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC050359|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK314777|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.0	
chr12	124965003	124965161	reg1035676.p1	4.065	+	AK126577 NM_181709	-191373	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-507353	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-507883	-	TSC_hg19_v1_chr12_-_125002875 BC033087	37777	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	86993	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	383223	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr18	32309396	32309485	reg1030654.p1	4.065	+	NM_001198941 NM_032978 TSC_hg19_v1_chr18_+_32290229 AK291156	-19194	+	NM_001128175 NM_001198938 NM_001198939 NM_001198940 AK308410 AL833285 BC005300 AB209102	-136136	+	AJ009668 TSC_hg19_v1_chr18_+_32073374	-236077	+	NM_001390 NM_001391 AB463020 BT006937 EU831587 EU831619 EU831672 EU831705	26499	+	AK296450 NM_001198943	88485	+	FJ535564 FJ535565 NM_001198942 NM_001198944 NM_032980 NM_032981 AK295732 U46746 AK295789 U26743 AK315215	88878	+	NM_001198941|DTNA|1837|dystrobrevin, alpha##NM_032978|DTNA|1837|dystrobrevin, alpha##AK291156|DTNA|1837|dystrobrevin, alpha##NM_001128175|DTNA|1837|dystrobrevin, alpha##NM_001198938|DTNA|1837|dystrobrevin, alpha##NM_001198939|DTNA|1837|dystrobrevin, alpha##NM_001198940|DTNA|1837|dystrobrevin, alpha##AK308410|DTNA|1837|dystrobrevin, alpha##AL833285|DTNA|1837|dystrobrevin, alpha##BC005300|DTNA|1837|dystrobrevin, alpha##AB209102|DTNA|1837|dystrobrevin, alpha##AJ009668|DTNA|1837|dystrobrevin, alpha##NM_001390|DTNA|1837|dystrobrevin, alpha##NM_001391|DTNA|1837|dystrobrevin, alpha##BT006937|DTNA|1837|dystrobrevin, alpha##EU831587|DTNA|1837|dystrobrevin, alpha##EU831619|DTNA|1837|dystrobrevin, alpha##EU831672|DTNA|1837|dystrobrevin, alpha##EU831705|DTNA|1837|dystrobrevin, alpha##AK296450|DTNA|1837|dystrobrevin, alpha##NM_001198943|DTNA|1837|dystrobrevin, alpha##FJ535564|DTNA|1837|dystrobrevin, alpha##FJ535565|DTNA|1837|dystrobrevin, alpha##NM_001198942|DTNA|1837|dystrobrevin, alpha##NM_001198944|DTNA|1837|dystrobrevin, alpha##NM_032980|DTNA|1837|dystrobrevin, alpha##NM_032981|DTNA|1837|dystrobrevin, alpha##AK295732|DTNA|1837|dystrobrevin, alpha##U46746|DTNA|1837|dystrobrevin, alpha##AK295789|DTNA|1837|dystrobrevin, alpha##U26743|DTNA|1837|dystrobrevin, alpha##AK315215|DTNA|1837|dystrobrevin, alpha	0.297733	CTCF.p2:-14:0.298
chr20	49994858	49994937	reg1028686.p1	4.065	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	-355240	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-419529	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-419834	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	164242	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	164378	-	EU887574 EU887577 NM_001136021	184270	-	BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.0	
chr11	67254194	67254318	reg1032685.p1	4.064	+	TSC_hg19_v1_chr11_+_67250595 BC104797 BC104827 U31913 AB529203 EU446613	-3644	+	NM_003977 TSC_hg19_v1_chr11_+_67250510 U78521	-3744	+	AK310743 TSC_hg19_v1_chr11_-_67236717 AK296988 AY007143 BC013883 BC051854 BC125134 AK303342 NM_001078650 NM_001078651 NM_025124 AK025402	-17555	-	X98654 TSC_hg19_v1_chr11_-_67271900	17618	-	TSC_hg19_v1_chr11_-_67272835 AF334584 BC022230 NM_001130848 NM_004910	18577	-	TSC_hg19_v1_chr11_-_67275634 BT006909 CR457050 CR542042 AK310197 AK001498 BC016704 AF089814	21377	-	BC104797|AIP|9049|aryl hydrocarbon receptor interacting protein##BC104827|AIP|9049|aryl hydrocarbon receptor interacting protein##U31913|AIP|9049|aryl hydrocarbon receptor interacting protein##EU446613|AIP|9049|aryl hydrocarbon receptor interacting protein##NM_003977|AIP|9049|aryl hydrocarbon receptor interacting protein##U78521|AIP|9049|aryl hydrocarbon receptor interacting protein##AK310743|TMEM134|80194|transmembrane protein 134##AK296988|TMEM134|80194|transmembrane protein 134##AY007143|TMEM134|80194|transmembrane protein 134##BC013883|TMEM134|80194|transmembrane protein 134##BC051854|TMEM134|80194|transmembrane protein 134##BC125134|TMEM134|80194|transmembrane protein 134##AK303342|TMEM134|80194|transmembrane protein 134##NM_001078650|TMEM134|80194|transmembrane protein 134##NM_001078651|TMEM134|80194|transmembrane protein 134##NM_025124|TMEM134|80194|transmembrane protein 134##AK025402|TMEM134|80194|transmembrane protein 134##X98654|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##AF334584|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##BC022230|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##NM_001130848|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##NM_004910|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##BT006909|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR457050|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR542042|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK310197|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK001498|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BC016704|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AF089814|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2	0.112332	
chr1	206858004	206858113	reg1032241.p2	4.064	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-48948	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	-49214	+	TSC_hg19_v1_chr1_-_206785905 NM_001201478 NM_006893	-72175	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	413	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	87821	-	AY040367 NM_153758 AB463800	114168	+	BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001201478|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_006893|EIF2D|1939|eukaryotic translation initiation factor 2D##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19	0.0	
chr12	6313766	6313861	reg1029037.p1	4.064	+	TSC_hg19_v1_chr12_+_6309565 NM_001769 AK315219 AK308700 AK296332 AK309527 AY966455 X60111 AK296894 AK298431 BC011988 M38690 AY423720 DQ891314 DQ894498 AB590218 CU680148 L34068	-4243	+	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	-80054	-	AJ272204 NM_020373	-258416	-	AK001527 NM_018173 BC104751 BC105961 BC109095	105820	+	TSC_hg19_v1_chr12_+_6419886 BC040273	106072	+	AK023741 NM_001144856	106285	+	NM_001769|CD9|928|CD9 molecule##AK315219|CD9|928|CD9 molecule##AK308700|CD9|928|CD9 molecule##AK296332|CD9|928|CD9 molecule##AK309527|CD9|928|CD9 molecule##AY966455|CD9|928|CD9 molecule##X60111|CD9|928|CD9 molecule##AK296894|CD9|928|CD9 molecule##AK298431|CD9|928|CD9 molecule##BC011988|CD9|928|CD9 molecule##M38690|CD9|928|CD9 molecule##AY423720|CD9|928|CD9 molecule##DQ891314|CD9|928|CD9 molecule##DQ894498|CD9|928|CD9 molecule##L34068|CD9|928|CD9 molecule##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor##AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##AK001527|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_018173|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC104751|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC105961|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC109095|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC040273|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AK023741|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144856|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6	0.294415	CTCF.p2:-6:0.294
chr21	38580273	38580361	reg1030485.p1	4.064	+	D83077 NM_003316	-125071	+	TSC_hg19_v1_chr21_+_38445570 AK297921 BC092466 NM_001001894 AK291992 AK299991	-134700	+	AB035742 AB037162 TSC_hg19_v1_chr21_-_38445400 NM_153682	-134894	-	BC029827 TSC_hg19_v1_chr21_+_38593064	12742	+	TSC_hg19_v1_chr21_-_38639617 AK316460 AK299662	59291	-	TSC_hg19_v1_chr21_-_38639642 AJ001867 AK300024 AK312707 D87343 NM_006052 AK303624	59511	-	D83077|TTC3|7267|tetratricopeptide repeat domain 3##NM_003316|TTC3|7267|tetratricopeptide repeat domain 3##AK297921|TTC3|7267|tetratricopeptide repeat domain 3##BC092466|TTC3|7267|tetratricopeptide repeat domain 3##NM_001001894|TTC3|7267|tetratricopeptide repeat domain 3##AK291992|TTC3|7267|tetratricopeptide repeat domain 3##AK299991|TTC3|7267|tetratricopeptide repeat domain 3##AB035742|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB037162|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##NM_153682|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##BC029827|DSCR9|257203|Down syndrome critical region gene 9 (non-protein coding)##AK316460|DSCR3|10311|Down syndrome critical region gene 3##AK299662|DSCR3|10311|Down syndrome critical region gene 3##AJ001867|DSCR3|10311|Down syndrome critical region gene 3##AK300024|DSCR3|10311|Down syndrome critical region gene 3##AK312707|DSCR3|10311|Down syndrome critical region gene 3##D87343|DSCR3|10311|Down syndrome critical region gene 3##NM_006052|DSCR3|10311|Down syndrome critical region gene 3##AK303624|DSCR3|10311|Down syndrome critical region gene 3	0.0	
chr3	136537067	136537208	reg1028629.p2	4.064	+	TSC_hg19_v1_chr3_-_136471221 BC040708 AB210023 AK309934 BC064699 CR749247 NM_005862	-65922	-	S67325 TSC_hg19_v1_chr3_+_135969193 BC013768 AB209009 BC053661 AK295312 AK130359 AK225733 AK303079 AK225215 AL831978 CU680676	-567935	+	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	-567973	+	BC050423 NM_001097599 NM_001097600 NM_025246 TSC_hg19_v1_chr3_+_136537897 BC022557 AK314079 BC000111 AL136661	782	+	TSC_hg19_v1_chr3_+_136581071 NM_006153 BC006403	43903	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	43955	+	BC040708|STAG1|10274|stromal antigen 1##AB210023|STAG1|10274|stromal antigen 1##AK309934|STAG1|10274|stromal antigen 1##BC064699|STAG1|10274|stromal antigen 1##CR749247|STAG1|10274|stromal antigen 1##NM_005862|STAG1|10274|stromal antigen 1##S67325|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC013768|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AB209009|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC053661|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK295312|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK130359|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225733|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK303079|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225215|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AL831978|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC050423|TMEM22|80723|transmembrane protein 22##NM_001097599|TMEM22|80723|transmembrane protein 22##NM_001097600|TMEM22|80723|transmembrane protein 22##NM_025246|TMEM22|80723|transmembrane protein 22##BC022557|TMEM22|80723|transmembrane protein 22##AK314079|TMEM22|80723|transmembrane protein 22##BC000111|TMEM22|80723|transmembrane protein 22##AL136661|TMEM22|80723|transmembrane protein 22##NM_006153|NCK1|4690|NCK adaptor protein 1##BC006403|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1	0.122692	
chr5	81045486	81045667	reg1028840.p2	4.064	+	BC075011 BC075010 AK122960 AB078619 BC089437 NM_130767 TSC_hg19_v1_chr5_-_80690052	-355574	-	NM_001131035 NM_001131036 NM_032280 AL512712 TSC_hg19_v1_chr5_+_80597439 BC032736 AK314160 BC022799 BC014841	-448137	+	AK092460 TSC_hg19_v1_chr5_-_80597373 AK096680	-448204	-	TSC_hg19_v1_chr5_-_81046929 AB528651 CU677799 DQ891620 DQ894812 EU176592 EU831646 EU831730 AK293544 AK074537 AK294864 AK297494 AF161465 AF077048 AK299858 AK312337 CR936787 AL080076 BC017020	1323	-	TSC_hg19_v1_chr5_-_81046990 NM_012446	1532	-	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	222269	+	BC075011|ACOT12|134526|acyl-CoA thioesterase 12##BC075010|ACOT12|134526|acyl-CoA thioesterase 12##AK122960|ACOT12|134526|acyl-CoA thioesterase 12##AB078619|ACOT12|134526|acyl-CoA thioesterase 12##BC089437|ACOT12|134526|acyl-CoA thioesterase 12##NM_130767|ACOT12|134526|acyl-CoA thioesterase 12##NM_001131035|ZCCHC9|84240|zinc finger, CCHC domain containing 9##NM_001131036|ZCCHC9|84240|zinc finger, CCHC domain containing 9##NM_032280|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AL512712|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC032736|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AK314160|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC022799|ZCCHC9|84240|zinc finger, CCHC domain containing 9##BC014841|ZCCHC9|84240|zinc finger, CCHC domain containing 9##AK092460|LOC100131067|100131067|uncharacterized LOC100131067##AK096680|LOC100131067|100131067|uncharacterized LOC100131067##DQ891620|SSBP2|23635|single-stranded DNA binding protein 2##DQ894812|SSBP2|23635|single-stranded DNA binding protein 2##EU176592|SSBP2|23635|single-stranded DNA binding protein 2##EU831646|SSBP2|23635|single-stranded DNA binding protein 2##EU831730|SSBP2|23635|single-stranded DNA binding protein 2##AK293544|SSBP2|23635|single-stranded DNA binding protein 2##AK074537|SSBP2|23635|single-stranded DNA binding protein 2##AK294864|SSBP2|23635|single-stranded DNA binding protein 2##AK297494|SSBP2|23635|single-stranded DNA binding protein 2##AF161465|SSBP2|23635|single-stranded DNA binding protein 2##AF077048|SSBP2|23635|single-stranded DNA binding protein 2##AK299858|SSBP2|23635|single-stranded DNA binding protein 2##AK312337|SSBP2|23635|single-stranded DNA binding protein 2##CR936787|SSBP2|23635|single-stranded DNA binding protein 2##AL080076|SSBP2|23635|single-stranded DNA binding protein 2##BC017020|SSBP2|23635|single-stranded DNA binding protein 2##NM_012446|SSBP2|23635|single-stranded DNA binding protein 2##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)	0.0	
chr7	69290026	69290095	reg1022514.p1	4.064	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-225472	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-225731	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-226224	+	TSC_hg19_v1_chr7_+_70231164 AK296981	941145	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1307728	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2511718	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.0	
chr9	128412654	128412768	reg1034546.p1	4.064	+	TSC_hg19_v1_chr9_+_128024122 AK056493 NM_015635 AB040954 BC114937 BC114962	-388562	+	TSC_hg19_v1_chr9_+_128024104 BC110990	-388607	+	TSC_hg19_v1_chr9_+_128024097 AK296381	-388613	+	TSC_hg19_v1_chr9_-_128469297 M37191	56599	-	TSC_hg19_v1_chr9_-_128469466 AK290060	56756	-	AL833042 TSC_hg19_v1_chr9_-_128469485 AY633624 AY633625 AY633626 BC002326 BC003044	56768	-	AK056493|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##NM_015635|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AB040954|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114937|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114962|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC110990|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AK296381|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##M37191|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AK290060|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AL833042|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633624|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633625|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633626|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC002326|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC003044|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1	0.0	
chr10	111984131	111984249	reg1031902.p2	4.063	+	BC012907 NM_001008541	-14202	+	TSC_hg19_v1_chr10_+_111967381 BC035128 NM_130439	-16831	+	AK291488 TSC_hg19_v1_chr10_+_111767988 U37122 BC043143	-216223	+	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	1631	+	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	80403	-	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	80510	-	BC012907|MXI1|4601|MAX interactor 1##NM_001008541|MXI1|4601|MAX interactor 1##BC035128|MXI1|4601|MAX interactor 1##NM_130439|MXI1|4601|MAX interactor 1##AK291488|ADD3|120|adducin 3 (gamma)##U37122|ADD3|120|adducin 3 (gamma)##BC043143|ADD3|120|adducin 3 (gamma)##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1	0.740427	CTCF.p2:16:0.740
chr10	119941195	119941274	reg1024797.p2	4.063	+	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	-134804	+	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	-135190	-	TSC_hg19_v1_chr10_+_119302713 AB463605	-638491	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	160590	-	AK313269 AK290461 NM_004248	413924	-	CU691560 TSC_hg19_v1_chr10_-_120514298	573053	-	BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A##AK313269|PRLHR|2834|prolactin releasing hormone receptor##AK290461|PRLHR|2834|prolactin releasing hormone receptor##NM_004248|PRLHR|2834|prolactin releasing hormone receptor	0.0	
chr12	124994919	124994985	reg1041913.p2	4.063	+	AK126577 NM_181709	-221243	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-537223	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-537753	-	TSC_hg19_v1_chr12_-_125002875 BC033087	7907	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	57123	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	353353	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.300659	CTCF.p2:30:0.263
chr15	40574726	40574867	reg1036075.p1	4.063	+	NM_001190479	-10	-	TSC_hg19_v1_chr15_+_40545348 BC035596	-29430	+	AK095915 NM_001039905 BC171826	-29657	-	BT006905 CU674468 TSC_hg19_v1_chr15_-_40599904 AB209583	25100	-	TSC_hg19_v1_chr15_-_40599986 BC000939	25195	-	BC136467 M95678 TSC_hg19_v1_chr15_-_40600050	25244	-	NM_001190479|ANKRD63|100131244|ankyrin repeat domain 63##BC035596|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AK095915|C15orf56|644809|chromosome 15 open reading frame 56##NM_001039905|C15orf56|644809|chromosome 15 open reading frame 56##BT006905|PLCB2|5330|phospholipase C, beta 2##AB209583|PLCB2|5330|phospholipase C, beta 2##BC000939|PLCB2|5330|phospholipase C, beta 2##BC136467|PLCB2|5330|phospholipase C, beta 2##M95678|PLCB2|5330|phospholipase C, beta 2	0.011815	
chr2	9795650	9795788	reg1033147.p1	4.063	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-24594	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	-24670	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	-25106	-	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	187901	+	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	296131	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	388073	+	NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11	0.0	
chr4	12158	12306	reg1034465.p2	4.063	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr4_+_53214 AK300505 AK311343 BC036110 BC043151 AK301848 AK309855 AK056302 BC020836 BC009008 BX537887 NM_182524	40992	+	TSC_hg19_v1_chr4_+_124389 AK096662 AL833758 BC104026 BC104028	112142	+	AK302099 NM_001137608	277711	-	AK300505|ZNF595|152687|zinc finger protein 595##BC036110|ZNF595|152687|zinc finger protein 595##BC043151|ZNF595|152687|zinc finger protein 595##AK301848|ZNF595|152687|zinc finger protein 595##AK309855|ZNF595|152687|zinc finger protein 595##AK056302|ZNF595|152687|zinc finger protein 595##BC020836|ZNF718|255403|zinc finger protein 718##BX537887|ZNF595|152687|zinc finger protein 595##NM_182524|ZNF595|152687|zinc finger protein 595##AK096662|ZNF718|255403|zinc finger protein 718##AL833758|ZNF718|255403|zinc finger protein 718##BC104026|ZNF718|255403|zinc finger protein 718##BC104028|ZNF718|255403|zinc finger protein 718##AK302099|ZNF732|654254|zinc finger protein 732##NM_001137608|ZNF732|654254|zinc finger protein 732	2.006739	CTCF.p2:8:0.974	CTCF.p2:-51:0.302	CTCF.p2:69:0.730
chr5	7593179	7593293	reg1039031.p1	4.063	+	TSC_hg19_v1_chr5_+_7396319 NM_020546 AF410885 AK127036 BC111743 AK304041	-196968	+	AK308405 NM_001171806 AK303516	-847114	+	NM_001171805 NM_006999 AF089896 BC084567	-878486	+	BC053548 BC104204 BC104205 BC115361 NM_001089584	258023	-	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	275896	-	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	276023	+	NM_020546|ADCY2|108|adenylate cyclase 2 (brain)##AF410885|ADCY2|108|adenylate cyclase 2 (brain)##AK127036|ADCY2|108|adenylate cyclase 2 (brain)##BC111743|ADCY2|108|adenylate cyclase 2 (brain)##AK304041|ADCY2|108|adenylate cyclase 2 (brain)##AK308405|PAPD7|11044|PAP associated domain containing 7##NM_001171806|PAPD7|11044|PAP associated domain containing 7##AK303516|PAPD7|11044|PAP associated domain containing 7##NM_001171805|PAPD7|11044|PAP associated domain containing 7##NM_006999|PAPD7|11044|PAP associated domain containing 7##AF089896|PAPD7|11044|PAP associated domain containing 7##BC084567|PAPD7|11044|PAP associated domain containing 7##BC053548|C5orf49|134121|chromosome 5 open reading frame 49##BC104204|C5orf49|134121|chromosome 5 open reading frame 49##BC104205|C5orf49|134121|chromosome 5 open reading frame 49##BC115361|C5orf49|134121|chromosome 5 open reading frame 49##NM_001089584|C5orf49|134121|chromosome 5 open reading frame 49##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase	0.791769	CTCF.p2:-1:0.792
chr8	128319898	128320078	reg1025715.p1	4.063	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-749264	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-749433	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1356575	-	DQ486513 NM_001159542	107868	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	428337	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	428502	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.0	
chr13	40634675	40634777	reg1026449.p2	4.062	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-404865	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-457364	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-457399	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	605986	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	710566	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	710606	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.0	
chr13	61228699	61228788	reg1029754.p1	4.062	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-257264	+	BX537910 NM_001146071 NM_030794	-258153	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-490642	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	760510	-	AK289924 NM_022843	760911	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	6575761	-	EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9	0.107515	
chr14	106725062	106725167	reg1033681.p1	4.062	+	X67943 TSC_hg19_v1_chr14_-_106721546	-3616	-	HM773994 HM773969 HM774039 HM774286 HM774541 L26903 AF471552 AF165112 AF103256 AF103274 AF485481 AY422534 HM995226 AF485479 HM995136 DQ187519 AF471191 AY423174 AY423212 AY487925 AJ239389 FJ195534 AJ239350 EF633792 HM994991 HM994995 HM995120 HM995247 HM995734 HM995857 HM995861 HM995862 HM995956 HM995966 HM996020 HM996043 HM996120 AJ233704 DQ100731 DQ926104 DQ926196 DQ926591 AF021977 AF211206 AF398960 AF408726 AF471175 AF471198 AF471363 AF471489 AJ556667 AJ556739 DQ535353 DQ926403 DQ926454 EF177946 FN563816 GU570347 HQ689731 U64478 Z96957 AF283800 AJ519282 M86598 M86599 TSC_hg19_v1_chr14_-_106714902	-10366	-	AY392910 AY392920 AY392921 AY392925 AY392927 AJ309825 AF062121 AF062163 AF062202 Z14212 AY510104 X61023 X61235 AK098108 BC024289 TSC_hg19_v1_chr14_-_106692204 BX640874 AK027379 AK097359 AK127415 AK128635 AK129812 AK130453 BX640622 L29155	-32958	-	AF267078 U64476 DQ523922 AF460679 AF460691 U64467 DQ454508 DQ523923 AY003727 DQ454426 DQ454615 GQ232878 GQ232903 GQ232925 GQ232927 GQ232947 EU814957 JF810265 AY003761 AF103273 GU552695 DQ454618 FJ874064 GQ232772 GQ232846 GU552694 GU552734 GU552752 AY003728 HM996533 AY003827 AY003856 GQ232877 GU552710 AY003715 AY003717 AY003738 AY003843 AY003847 AY003852 DQ454401 DQ454562 GQ232908 AY003766 GQ232777 GQ232859 GQ232872 GQ232923 GU552704 GU552708 GU552718 GU552741 GU552742 GU552746 GU552748 GU552758 GU552759 DQ454687 DQ454876 DQ523884 DQ454518 FJ840380 FJ840175 FJ840178 FJ840222 FJ873867 Z11945 AY003806 DQ454747 FJ839967 FJ839989 FJ840090 FJ840195 FJ840312 FJ840319 FJ840320 FJ840327 FJ840338 FJ840391 FJ873815 FJ873824 FJ873849 FJ873872 FJ873885 FJ873902 FJ873910 FJ873913 FJ873916 FJ873922 FJ873935 FJ873946 FJ873974 FJ873975 FJ874010 FJ874023 FJ874034 FJ874046 FJ874048 FJ874074 FJ874087 GQ504854 HM116131 HM116209 HM116214 AF103210 AJ008183 AJ008196 AJ008214 AJ008241 DQ454767 AY003815 AY003870 AY003737 AY003774 AY003778 AY003820 DQ454753 EU433871 EU433883 GQ504883 HM996150 AY003857 GQ504910 AF103115 EU099172 EU099195 EU099110 AJ132560 AJ132561 AJ132562 AJ132563 EU099182 EU099264 AJ010334 DQ454751 EU099225 EU099256 HM996312 AY206990 DQ523924 DQ524170 GQ504968 TSC_hg19_v1_chr14_-_106725449 AM183988 AM183989 AM183991 AM279574 GQ232938 HQ703990 AF103328 AF103356 AF103073 AF103150 AF103286 AF103290 AF103371 HM774572 GQ504879 GQ504884 GQ504947 JN111000 AF103035 EU146335 AF103352 AF103353 AF103049 GQ504964 JN110538 JN110631 JN110645 JN110650 JN110677 JN110696 JN110699 JN110787 L03816 L03817 L03818 L03819 L04342 AF103198 AY062298 FJ385357 FJ385358 GQ504851 GQ504868 GQ504870 GQ504875 GQ504878 GQ504881 GQ504888 GQ504889 GQ504890 GQ504895 GQ504903 GQ504923 GQ504924 GQ504933 GQ504937 GQ504946 GQ504950 GQ504972 GQ504974 GQ504976 GQ504978 GQ504983 GQ504985 GQ504987 GQ504988 HM773970 HM773998 HM774045 HM774098 HM774232 HM774297 HM774352 HM774364 HM774372 HM774385 HM774431 HM774434 HM774459 HM774503 HM774582 HM774648 HM774689 HM774750 HM774890 HM774978 HQ703998 HQ703999 HQ704017 HQ704042 L26906 L33031 AF103369 AF103154 AF103366 AF165104 U41571 AF103321 AF103335 AJ008250 AY099259 EU146323 EU146326 EU146327 EU146329 EU146332 EU146342 EU146374 EU146387 X93001 X93003 Y18120 DQ100810 DQ100879 AJ271551 AJ271557 AJ272334 AJ298607 AJ300784 AY423185 DQ100843 L02256 L02262 L02264 L02266 L02268 L02269 AF001424 AF471287 AF485441 AF485447 AJ241351 AY422534 AY423163 AY646422 HM995130 L19917 AF485437 AF485457 AF485473 AJ006648 AJ300780 AY423180 L19903 L19920 U21262 U21272 AF103148 AY062299 HM995230 HM996491 AF062191 DQ100915 HM995048 AY062297 FN563767 X81742 AF098362 AY640484 U00525 X79164 AF062289 AF062297 AF062298 AF062301 AF062304 AF062307 AY866624 AY941927 AY971138 DQ100817 DQ524115 DQ926052 DQ926056 DQ926057 DQ926276 DQ926278 EF633810 EF633827 HM994987 HM994988 HM995202 HM995232 HM995233 HM995238 HM995242 HM995243 HM995256 HM995257 HM995259 HM995260 HM995261 HM995262 HM995263 HM995264 HM995266 HM995390 HM995391 HM995393 HM995422 HM995434 HM995436 HM995437 HM995438 HM995451 HM995466 HM995568 HM995590 HM995620 HM995822 HM995931 HM995959 HM996082 HM996159 HM996219 HM996232 Z98720 Z98721 AJ245230 AJ555259 DQ005303 DQ840756 Z96968 Z98718 AB027439 AB067177 AB087877 AF004323 AF174111 AJ233694 AJ308450 AJ508767 AY686918 AY781826 AY781828 AY866718 AY944694 AY944710 AY944718 DQ005292 DQ065685 DQ100684 DQ100710 DQ100713 DQ100794 DQ100838 DQ100851 DQ100860 DQ100890 DQ100975 DQ431645 DQ926026 DQ926027 DQ926030 DQ926044 DQ926045 DQ926046 DQ926047 DQ926048 DQ926076 DQ926128 DQ926134 DQ926185 DQ926288 DQ926298 DQ926358 DQ926375 DQ926580 DQ926584 EF177967 EF178003 EF178031 EF178096 EF178104 EF178138 EF633826 FJ385282 FJ385309 FJ385317 FJ385389 GU570312 HM995971 HQ129860 HQ378370 L19915 L19916 L19919 L43083 L43085 L48237 U21259 U58144 Y09384 Y09386 Y09388 AB021519 AB021521 AB021523 AB021526 AB021530 AB021533 AB021534 AB021536 AB021541 AB063654 AB063664 AB063672 AB063675 AB063799 AB063807 AB063811 AB063824 AB063849 AB063887 AB063890 AB066894 AB066973 AB066977 AB067077 AB067081 AB067095 AB067102 AB067124 AB067240 AB067250 AB067252 AB067259 AB067260 AB288084 AB585999 AF004322 AF004324 AF015123 AF015125 AF015126 AF015128 AF015129 AF015130 AF015132 AF015133 AF015134 AF015135 AF021986 AF022011 AF052520 AF052522 AF052524 AF062167 AF062251 AF115107 AF115108 AF115109 AF115110 AF123351 AF123354 AF123355 AF123356 AF123357 AF123358 AF123359 AF123360 AF123361 AF123363 AF123364 AF123365 AF123366 AF123367 AF123368 AF123369 AF123370 AF123371 AF123372 AF123373 AF123374 AF123375 AF123376 AF123377 AF123378 AF123379 AF174038 AF174057 AF174067 AF174077 AF174083 AF174089 AF174098 AF174101 AF174103 AF174105 AF231394 AF231395 AF231396 AF231397 AF231398 AF231399 AF231400 AF231402 AF231403 AF302822 AF396474 AF396476 AF442756 AF455924 AF471288 AF471289 AF471294 AF471317 AF471318 AF471321 AF471325 AF471326 AF471330 AF471331 AF471339 AF471349 AF471350 AF471358 AF471359 AF471369 AF471370 AF471371 AF471372 AF471375 AF471376 AF471384 AF471387 AJ006111 AJ006114 AJ006115 AJ006116 AJ006117 AJ006118 AJ006119 AJ006120 AJ239348 AJ239354 AJ239367 AJ239378 AJ243110 AJ245229 AJ249630 AJ271555 AJ276097 AJ298606 AJ298608 AJ298609 AJ298610 AJ298611 AJ300789 AJ300794 AJ313386 AJ414026 AJ519289 AJ519297 AJ555256 AJ555270 AJ579095 AJ579100 AJ579106 AJ579108 AJ579113 AJ579142 AJ579157 AJ579159 AJ579181 AJ579184 AJ579188 AJ579195 AJ579196 AJ579221 AJ579225 AJ579226 AJ579228 AJ579236 AJ579238 AJ579261 AJ579264 AJ579267 AJ579270 AJ579271 AJ579272 AJ579274 AJ579277 AJ579278 AJ579280 AJ579283 AJ617570 AJ627233 AJ627234 AJ627240 AJ627250 AM259136 AM259140 AM279605 AY033252 AY033255 AY055484 AY263417 AY263418 AY345920 AY376120 AY506559 AY554180 AY577295 AY640513 AY640540 AY686868 AY686874 AY781824 AY781873 AY789123 AY789125 AY789442 AY846269 AY866781 AY866785 AY866788 AY880990 AY885173 AY927662 AY941888 AY941899 AY941902 AY941930 AY941947 AY944688 AY944707 AY971091 AY971124 D83687 D83693 DQ065632 DQ065707 DQ100700 DQ100717 DQ100842 DQ212496 DQ212498 DQ212500 DQ328862 DQ379475 DQ535280 DQ535283 DQ535297 DQ535299 DQ535303 DQ535312 DQ535317 DQ535318 DQ535343 DQ535368 DQ535376 DQ535380 DQ535400 DQ535446 DQ535463 DQ535471 DQ535477 DQ535481 DQ926151 DQ926157 DQ926210 DQ926214 DQ926215 DQ926279 DQ926353 DQ926370 DQ926380 DQ926441 DQ926551 DQ926579 EF178054 EF633771 EF633773 EF633774 EF633775 EF633776 EF633777 EF633778 EF633822 EF633828 FJ385277 FJ385291 FJ385311 FJ385361 FJ385380 FJ385384 FJ481090 FJ492915 FJ492944 FN562944 FN562945 FN562946 FN562947 FN562948 FN562949 FN562950 FN562951 FN562952 FN562953 FN562954 FN562955 FN562956 FN562957 FN562958 FN562959 FN562960 FN562961 FN562962 FN562963 FN562964 FN562965 FN562966 FN562967 FN562968 FN563753 FN563754 FN563755 FN563756 FN563757 FN563758 FN563759 FN563760 FN563761 FN563763 FN563764 FN563770 FN563773 FN563774 FN563775 FN563776 FN563777 FN563778 FN563779 FN563782 FN563783 FN563787 FN563788 FN563790 FN563791 FN563792 FN563793 FN563794 FN563796 FN563797 FN563799 FN563801 FN563804 FN563806 FN563808 FN563809 FN563810 FN563815 FN563816 FN563819 FN563820 FN563821 FN563822 FN563823 FN563824 FN563825 FN563826 FN563827 FN563828 GU570309 GU570311 GU570316 GU570317 GU570318 GU570319 GU570322 GU570340 HM152515 HM152523 HQ129862 HQ689770 L12188 L14822 L25292 L34164 M17746 M17747 M17748 M17749 M57940 M57941 M57942 M57943 M57944 M87268 S55094 S67717 U00491 U00495 U00509 U00510 U00521 U00536 U00537 U00541 U00549 U07986 U27187 U38588 U64486 U76685 U77373 U82257 U93176 U95236 U95237 U96286 U97242 X62955 X62956 X62957 X62962 X62963 X62964 X62971 X69692 X98751 X99363 X99365 Z33900 Z33903 Z46382 Z74668 Z96954 Z96955 Z96956 Z96958 Z96967 Z96975 Z98714 Z98715 Z98716 Z98717 Z98719 Z98723 Z98725 AJ519288 AJ519312 S73957 X81746 AJ519239 AJ519328 AJ519258 AJ519219 AJ519235 AJ519237 AJ519238 AJ519240 AJ519244 AJ519248 AJ519252 AJ519257 AJ519259 AJ519263 AJ519264 AJ519265 AJ519269 AJ519272 AJ519273 AJ519276 AJ519277 AJ519283 AJ519285 AJ519286 AJ519290 AJ519291 AJ519296 AJ519300 AJ519301 AJ519302 AJ519303 AJ519307 AJ519314 AJ519316 AJ519317 AJ519318 AJ519319 AJ519320 AJ519321 AJ519322 AJ519326 AJ519327 AJ519329 AJ519331 AJ519333 AJ519334 AJ519336 AJ519338 AJ519339 HM995767 HM995894 HM995896 HM995906	255	-	L14821 U19885 U42468 X56526 DQ001068 L28052 AF283793 AF283795 AF283796 AF283798 AF283799 AF283805 AJ519221 AJ519266 AJ519267 AJ519271 AJ519324 AJ519325 AJ519330 AJ519337 L26907 L33035 L08083 AF431049 X67909 L08090 AF062136 AF062184 AF062205 AF062260 AF062270 AF062276 AF062280 AF174012 AF174019 AF174024 AF174029 AJ131062 AY172959 L01276 L11699 L23931 L38433 M26994 M26995 M62731 M99595 S72729 U43754 X17677 X65895 X65900 X81726 X81731 X81732 X81748 X81755 Z11946 Z47213 Z47214 Z47217 Z47226 Z47232 CU677431 L08088 Z14202 M18513 X14584 AK128301 Z14205 Z14201 Z14200 BC069020 M34024 BC015760 M29470 BC078671 TSC_hg19_v1_chr14_-_106725734 AK130476 AK092803 AK097010 AK097950 AK098817 AK128533 AK129776 AK301393 AX747738 BX640947 M97920	564	-	AM279487 AF308557 Y17783 Y17784 HM774660 JN111012 AF103142 AY515002 HQ704054 JN110499 JN110977 JN111085 HM774129 HM774274 HM774585 HM774849 HQ704055 U21254 Y17140 AY050689 AY050700 AY392847 AY392855 AY393130 AY393134 AY393349 AY393375 AY393380 AY393622 AY393638 AY393642 AY393655 AY393684 AY393690 AY866668 DQ100948 AY393127 AF533986 AY866766 DQ926392 GU570247 AY866814 DQ100974 DQ926235 DQ926301 FJ039787 JN158459 AY944709 DQ535390 BC090939 AF062249 AF062286 AJ224083 GU179345 BC089421 BC066642 TSC_hg19_v1_chr14_-_106733637	8402	-	AK098108|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK027379|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097359|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128635|IGHD|3495|immunoglobulin heavy constant delta##AK129812|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130453|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640622|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF103353|IGK@|50802|immunoglobulin kappa locus##AB087877|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##AF231396|IGHV3-23|28442|immunoglobulin heavy variable 3-23##AJ006111|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006114|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006115|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006117|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006118|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006119|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ006120|IGKV3-20|28912|immunoglobulin kappa variable 3-20##AJ519334|IGHV3-23|28442|immunoglobulin heavy variable 3-23##AY172959|IGHV4-31|28396|immunoglobulin heavy variable 4-31##X14584|IGHV3-23|28442|immunoglobulin heavy variable 3-23##AK128301|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC069020|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC015760|IGHM|3507|immunoglobulin heavy constant mu##BC078671|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092803|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097010|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097950|IGHM|3507|immunoglobulin heavy constant mu##AK098817|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129776|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640947|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC090939|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089421|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC066642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.348126	CTCF.p2:10:0.348
chr14	31318560	31318720	reg1035655.p2	4.062	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	-227096	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	-227116	+	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	-290280	+	TSC_hg19_v1_chr14_+_31343764 NM_001135058 NM_004086 AY358900 AF006740 AK292724 BC000640 BC007230 BC018827	25078	+	NM_001128126 NM_007077	176042	+	BC126221 BC132673 BC143933 AK314041 TSC_hg19_v1_chr14_-_31495586 AK290229 U17989 NM_001083893 NM_014574	176930	-	AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##NM_001135058|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_004086|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AY358900|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AF006740|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##AK292724|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC000640|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC007230|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##BC018827|COCH|1690|coagulation factor C homolog, cochlin (Limulus polyphemus)##NM_001128126|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##NM_007077|AP4S1|11154|adaptor-related protein complex 4, sigma 1 subunit##BC126221|STRN3|29966|striatin, calmodulin binding protein 3##BC132673|STRN3|29966|striatin, calmodulin binding protein 3##BC143933|STRN3|29966|striatin, calmodulin binding protein 3##AK314041|STRN3|29966|striatin, calmodulin binding protein 3##AK290229|STRN3|29966|striatin, calmodulin binding protein 3##U17989|STRN3|29966|striatin, calmodulin binding protein 3##NM_001083893|STRN3|29966|striatin, calmodulin binding protein 3##NM_014574|STRN3|29966|striatin, calmodulin binding protein 3	0.0	
chr17	8726131	8726217	reg1032889.p2	4.062	+	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-23622	-	BC146949 BC146966 BC171861 NM_001128076	-64298	-	BC029224 AK057296 NM_001158261 NM_144681	-78046	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	44810	-	AY725853 AF128881 NM_014308	89642	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	142807	-	BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##BC146949|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC146966|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC171861|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##NM_001128076|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC029224|CCDC42|146849|coiled-coil domain containing 42##AK057296|CCDC42|146849|coiled-coil domain containing 42##NM_001158261|CCDC42|146849|coiled-coil domain containing 42##NM_144681|CCDC42|146849|coiled-coil domain containing 42##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5	0.0	
chr19	13278480	13278654	reg1029780.p1	4.062	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-14387	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-17275	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-17428	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	338609	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	564012	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	580152	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.0	
chr19	16229420	16229601	reg1020159.p3	4.062	+	AK293676 TSC_hg19_v1_chr19_+_16222706 X56741 AF498943 BT007184 CR536583 CR542274 DQ892523 DQ895735 AB209767	-6788	+	TSC_hg19_v1_chr19_+_16222683 BC002977	-6894	+	TSC_hg19_v1_chr19_+_16222463 AK025165 NM_005370	-7036	+	TSC_hg19_v1_chr19_-_16243033 AY927516	13552	-	AY319652 NM_032855	15327	+	TSC_hg19_v1_chr19_-_16250705 AK095221	21194	-	AK293676|RAB8A|4218|RAB8A, member RAS oncogene family##X56741|RAB8A|4218|RAB8A, member RAS oncogene family##AF498943|RAB8A|4218|RAB8A, member RAS oncogene family##BT007184|RAB8A|4218|RAB8A, member RAS oncogene family##CR536583|RAB8A|4218|RAB8A, member RAS oncogene family##CR542274|RAB8A|4218|RAB8A, member RAS oncogene family##DQ892523|RAB8A|4218|RAB8A, member RAS oncogene family##DQ895735|RAB8A|4218|RAB8A, member RAS oncogene family##AB209767|RAB8A|4218|RAB8A, member RAS oncogene family##BC002977|RAB8A|4218|RAB8A, member RAS oncogene family##AK025165|RAB8A|4218|RAB8A, member RAS oncogene family##NM_005370|RAB8A|4218|RAB8A, member RAS oncogene family##AY319652|HSH2D|84941|hematopoietic SH2 domain containing##NM_032855|HSH2D|84941|hematopoietic SH2 domain containing	0.0	
chr19	53141745	53141812	reg1030396.p2	4.062	+	TSC_hg19_v1_chr19_-_53141603 BC032867 AK027518 NM_001105549 NM_001105550 NM_001105551 NM_001105552 NM_001105553 NM_001105554 NM_018300	-154	-	BC067346 NM_001172655	-67862	+	TSC_hg19_v1_chr19_+_53073539 NM_018260 AK001753 BC131719 BC136425 BC136426 BC054884 BC080612	-68236	+	TSC_hg19_v1_chr19_-_53193740 AK289399 AK075066 NM_001242531 NM_001242538	52032	-	AK097434 NM_030972	91356	-	BC028590 AK091389 AX746954 NM_001161501 NM_001161499 NM_001161500	96520	-	BC032867|ZNF83|55769|zinc finger protein 83##AK027518|ZNF83|55769|zinc finger protein 83##NM_001105549|ZNF83|55769|zinc finger protein 83##NM_001105550|ZNF83|55769|zinc finger protein 83##NM_001105551|ZNF83|55769|zinc finger protein 83##NM_001105552|ZNF83|55769|zinc finger protein 83##NM_001105553|ZNF83|55769|zinc finger protein 83##NM_001105554|ZNF83|55769|zinc finger protein 83##NM_018300|ZNF83|55769|zinc finger protein 83##BC067346|ZNF701|55762|zinc finger protein 701##NM_001172655|ZNF701|55762|zinc finger protein 701##NM_018260|ZNF701|55762|zinc finger protein 701##AK001753|ZNF701|55762|zinc finger protein 701##BC131719|ZNF701|55762|zinc finger protein 701##BC136425|ZNF701|55762|zinc finger protein 701##BC136426|ZNF701|55762|zinc finger protein 701##BC054884|ZNF701|55762|zinc finger protein 701##BC080612|ZNF701|55762|zinc finger protein 701##AK289399|ZNF83|55769|zinc finger protein 83##AK075066|ZNF83|55769|zinc finger protein 83##NM_001242531|ZNF83|55769|zinc finger protein 83##NM_001242538|ZNF83|55769|zinc finger protein 83##AK097434|ZNF611|81856|zinc finger protein 611##NM_030972|ZNF611|81856|zinc finger protein 611##BC028590|ZNF611|81856|zinc finger protein 611##AK091389|ZNF611|81856|zinc finger protein 611##NM_001161501|ZNF611|81856|zinc finger protein 611##NM_001161499|ZNF611|81856|zinc finger protein 611##NM_001161500|ZNF611|81856|zinc finger protein 611	0.105329	
chr2	111812800	111812877	reg1027580.p1	4.062	+	AK300513 NM_001142807 BC022268	-322659	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-377016	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-377195	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	65649	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	828788	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	828923	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.0	
chr3	126194406	126194493	reg1031348.p1	4.062	+	AK097402 NM_182628 TSC_hg19_v1_chr3_+_126113866	-80626	+	TSC_hg19_v1_chr3_-_126076252 NM_014079 BC036733	-118234	-	AF052732 BC027241 AK222535 AK222694 TSC_hg19_v1_chr3_-_125899430 AK294392 AK294530 AB209299 NM_012190	-295006	-	TSC_hg19_v1_chr3_-_126194735 AY936556	276	-	DQ079590 NM_001040653 NM_025112 TSC_hg19_v1_chr3_-_126194793	340	-	AK055862 BC115405 BC115406 TSC_hg19_v1_chr3_-_126236597 AB075869 NM_001165974 NM_144639	42156	-	AK097402|CCDC37|348807|coiled-coil domain containing 37##NM_182628|CCDC37|348807|coiled-coil domain containing 37##NM_014079|KLF15|28999|Kruppel-like factor 15##BC036733|KLF15|28999|Kruppel-like factor 15##AF052732|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##BC027241|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222535|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222694|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294392|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294530|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AB209299|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##NM_012190|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AY936556|ZXDC|79364|ZXD family zinc finger C##DQ079590|ZXDC|79364|ZXD family zinc finger C##NM_001040653|ZXDC|79364|ZXD family zinc finger C##NM_025112|ZXDC|79364|ZXD family zinc finger C##AK055862|UROC1|131669|urocanase domain containing 1##BC115405|UROC1|131669|urocanase domain containing 1##BC115406|UROC1|131669|urocanase domain containing 1##AB075869|UROC1|131669|urocanase domain containing 1##NM_001165974|UROC1|131669|urocanase domain containing 1##NM_144639|UROC1|131669|urocanase domain containing 1	0.0	
chr5	58686140	58686320	reg1012153.p2	4.062	+	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	-33487	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	-114300	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	-350852	-	U50159 NM_006203 L20970	196069	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	378118	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	378225	-	AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.0	
chr8	30413905	30414086	reg1008860.p2	4.062	+	NM_001008710 NM_001008711 NM_001008712 NM_006867 AK304858 D84107 D84108 D84109 D84110 TSC_hg19_v1_chr8_+_30242056 BC003608	-171986	+	Z36874 TSC_hg19_v1_chr8_+_30209759	-204258	+	D84145 NM_006571 TSC_hg19_v1_chr8_+_30013882 AK314128 BC013175 CR456851	-400140	+	NM_001206847	82121	+	S67861 TSC_hg19_v1_chr8_-_30515718 X63469 BC030572 BC001775 NM_002095	101741	-	BC035691 TSC_hg19_v1_chr8_-_30585320 X15722 AB519179 AB519180 AB519181 AF228704 CU686724	171291	-	NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing##NM_006867|RBPMS|11030|RNA binding protein with multiple splicing##AK304858|RBPMS|11030|RNA binding protein with multiple splicing##D84107|RBPMS|11030|RNA binding protein with multiple splicing##D84108|RBPMS|11030|RNA binding protein with multiple splicing##D84109|RBPMS|11030|RNA binding protein with multiple splicing##D84110|RBPMS|11030|RNA binding protein with multiple splicing##BC003608|RBPMS|11030|RNA binding protein with multiple splicing##D84145|DCTN6|10671|dynactin 6##NM_006571|DCTN6|10671|dynactin 6##AK314128|DCTN6|10671|dynactin 6##BC013175|DCTN6|10671|dynactin 6##CR456851|DCTN6|10671|dynactin 6##NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341##S67861|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##X63469|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC030572|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC001775|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##NM_002095|GTF2E2|2961|general transcription factor IIE, polypeptide 2, beta 34kDa##BC035691|GSR|2936|glutathione reductase##X15722|GSR|2936|glutathione reductase##AB519179|GSR|2936|glutathione reductase##AB519180|GSR|2936|glutathione reductase##AB519181|GSR|2936|glutathione reductase##AF228704|GSR|2936|glutathione reductase	0.0	
chr9	95820634	95820774	reg1031846.p2	4.062	+	NM_033086 BX647829 BC111054 AY211386	-83955	+	NM_001083536	-111104	+	AK299274 TSC_hg19_v1_chr9_-_95640325 AK091203 AX746846 NM_001007101 AL833202 NM_031486 AK292997 AK309617	-180427	-	TSC_hg19_v1_chr9_+_95820982 BC014601 NM_145006	272	+	TSC_hg19_v1_chr9_+_95821007 CU677063 DQ894024 EU176188 AY358190	320	+	NM_032310 TSC_hg19_v1_chr9_+_95858498 AK057716 AK091611 AX747094 BC042201 BC038856 BC004500	37776	+	NM_033086|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BX647829|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##BC111054|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AY211386|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##NM_001083536|FGD3|89846|FYVE, RhoGEF and PH domain containing 3##AK299274|ZNF484|83744|zinc finger protein 484##AK091203|ZNF484|83744|zinc finger protein 484##NM_001007101|ZNF484|83744|zinc finger protein 484##AL833202|ZNF484|83744|zinc finger protein 484##NM_031486|ZNF484|83744|zinc finger protein 484##AK292997|ZNF484|83744|zinc finger protein 484##AK309617|ZNF484|83744|zinc finger protein 484##BC014601|SUSD3|203328|sushi domain containing 3##NM_145006|SUSD3|203328|sushi domain containing 3##DQ894024|SUSD3|203328|sushi domain containing 3##EU176188|SUSD3|203328|sushi domain containing 3##AY358190|SUSD3|203328|sushi domain containing 3##NM_032310|C9orf89|84270|chromosome 9 open reading frame 89##AK057716|C9orf89|84270|chromosome 9 open reading frame 89##AK091611|C9orf89|84270|chromosome 9 open reading frame 89##BC042201|C9orf89|84270|chromosome 9 open reading frame 89##BC038856|C9orf89|84270|chromosome 9 open reading frame 89##BC004500|C9orf89|84270|chromosome 9 open reading frame 89	0.0	
chr10	31642660	31642788	reg1031583.p1	4.061	+	AK311557 NM_001128128 NM_001174094 AK311187 AK311201	-32635	+	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	-34591	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	-34767	-	TSC_hg19_v1_chr10_-_32217729 AK315066 BC115362 BC115363 BC094719 CR936681 AK091182 AX746833 AK127611	575000	-	TSC_hg19_v1_chr10_-_32217770 AY033594 AY033595 NM_018287	575061	-	TSC_hg19_v1_chr10_-_32344938 AB462413	702208	-	AK311557|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001128128|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174094|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311187|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311201|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##AK315066|ARHGAP12|94134|Rho GTPase activating protein 12##BC115362|ARHGAP12|94134|Rho GTPase activating protein 12##BC115363|ARHGAP12|94134|Rho GTPase activating protein 12##BC094719|ARHGAP12|94134|Rho GTPase activating protein 12##CR936681|ARHGAP12|94134|Rho GTPase activating protein 12##AK091182|ARHGAP12|94134|Rho GTPase activating protein 12##AK127611|ARHGAP12|94134|Rho GTPase activating protein 12##AY033594|ARHGAP12|94134|Rho GTPase activating protein 12##AY033595|ARHGAP12|94134|Rho GTPase activating protein 12##NM_018287|ARHGAP12|94134|Rho GTPase activating protein 12	0.0	
chr12	104850418	104850584	reg1021863.p1	4.061	+	TSC_hg19_v1_chr12_+_104697516 NM_001008394 AK098698 BC027612	-152973	+	AK128515 TSC_hg19_v1_chr12_+_104682642 AY344670 AY344671 AY344672 AY344680 AY344094 AY344096 AY344095 AY344678 AF077367 AY344679	-167889	+	D88687 TSC_hg19_v1_chr12_+_104681047 AK295067	-169415	+	TSC_hg19_v1_chr12_+_104850745 NM_001173982 NM_018413 AK313217	193	+	AK290923 TSC_hg19_v1_chr12_+_104850752	250	+	TSC_hg19_v1_chr12_+_104850778 BC013315	270	+	NM_001008394|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK098698|EID3|493861|EP300 interacting inhibitor of differentiation 3##BC027612|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK128515|TXNRD1|7296|thioredoxin reductase 1##AY344670|TXNRD1|7296|thioredoxin reductase 1##AY344096|TXNRD1|7296|thioredoxin reductase 1##AY344095|TXNRD1|7296|thioredoxin reductase 1##AF077367|TXNRD1|7296|thioredoxin reductase 1##AY344679|TXNRD1|7296|thioredoxin reductase 1##D88687|TXNRD1|7296|thioredoxin reductase 1##AK295067|TXNRD1|7296|thioredoxin reductase 1##NM_001173982|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##NM_018413|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK313217|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK290923|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	0.30767	CTCF.p2:18:0.308
chr13	113596203	113596330	reg1032328.p1	4.061	+	TSC_hg19_v1_chr13_+_113344493 NM_015205 NM_032189	-251687	+	TSC_hg19_v1_chr13_-_113344130 AK057085	-252160	-	AK129953 NM_207440	-294909	+	TSC_hg19_v1_chr13_+_113622764 AB002360	26519	+	TSC_hg19_v1_chr13_+_113623680 AK315969 NM_001112732 AK295670	27329	+	TSC_hg19_v1_chr13_+_113633625 AK307867	37373	+	NM_015205|ATP11A|23250|ATPase, class VI, type 11A##NM_032189|ATP11A|23250|ATPase, class VI, type 11A##AK057085|LOC440149|440149|uncharacterized LOC440149##AK129953|C13orf35|400165|chromosome 13 open reading frame 35##NM_207440|C13orf35|400165|chromosome 13 open reading frame 35##AB002360|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK315969|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##NM_001112732|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK295670|MCF2L|23263|MCF.2 cell line derived transforming sequence-like##AK307867|MCF2L|23263|MCF.2 cell line derived transforming sequence-like	0.842047	CTCF.p2:-17:0.842
chr13	29943394	29943498	reg1033145.p2	4.061	+	BC150245 AB018317 NM_001033602 AB384524	-344671	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	-650391	-	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	-710152	+	BC032481 NM_015233 AK293970 BC119654 BC119655 BC129985	59364	+	AK301633 TSC_hg19_v1_chr13_+_30070532	127061	+	X59155 X57303 TSC_hg19_v1_chr13_-_30169595 AK312818 BC063303	226175	-	BC150245|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AB018317|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_001033602|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK301633|MTUS2|23281|microtubule associated tumor suppressor candidate 2##X59155|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##X57303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##AK312818|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1##BC063303|SLC7A1|6541|solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	0.927505	CTCF.p2:3:0.928
chr15	75933328	75933465	reg1036640.p2	4.061	+	AB463774 AM393583 CU675427 CU680036 TSC_hg19_v1_chr15_-_75932566 BC020557 BC011745 AY050497 AL136913 BC006487 AK001830 AK223121 NM_018285	-810	-	NM_001042588	-14678	-	NM_001042581 NM_005701	-14951	-	BC018775 NM_153271 AL833039 EF219141 DQ891695 DQ895211 EU831407 EU831499	7998	+	AB462981 AY359468 X96753 TSC_hg19_v1_chr15_-_76005157	71732	-	TSC_hg19_v1_chr15_-_76005190 NM_001897	71799	-	AM393583|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC020557|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC011745|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AY050497|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AL136913|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC006487|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK001830|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK223121|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_018285|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_001042588|SNUPN|10073|snurportin 1##NM_001042581|SNUPN|10073|snurportin 1##NM_005701|SNUPN|10073|snurportin 1##BC018775|SNX33|257364|sorting nexin 33##NM_153271|SNX33|257364|sorting nexin 33##AL833039|SNX33|257364|sorting nexin 33##EF219141|SNX33|257364|sorting nexin 33##DQ891695|SNX33|257364|sorting nexin 33##DQ895211|SNX33|257364|sorting nexin 33##EU831407|SNX33|257364|sorting nexin 33##EU831499|SNX33|257364|sorting nexin 33##AY359468|CSPG4|1464|chondroitin sulfate proteoglycan 4##X96753|CSPG4|1464|chondroitin sulfate proteoglycan 4##NM_001897|CSPG4|1464|chondroitin sulfate proteoglycan 4	0.0	
chr19	892221	892291	reg1031145.p1	4.061	+	BC034529 BC040146 TSC_hg19_v1_chr19_+_860648 CR536575	-31615	+	TSC_hg19_v1_chr19_+_859675 AB590861 AJ313463 DQ884409 M84526 BC051001	-32561	+	TSC_hg19_v1_chr19_+_859663 BC057807 AK300963 NM_001928	-32595	+	TSC_hg19_v1_chr19_-_893188 BC004554 BC011841 BC017282 AF106934	943	-	TSC_hg19_v1_chr19_-_893218 NM_005481	961	-	TSC_hg19_v1_chr19_-_913199 BC012775	20941	-	BC034529|CFD|1675|complement factor D (adipsin)##BC040146|CFD|1675|complement factor D (adipsin)##CR536575|CFD|1675|complement factor D (adipsin)##AJ313463|CFD|1675|complement factor D (adipsin)##DQ884409|CFD|1675|complement factor D (adipsin)##M84526|CFD|1675|complement factor D (adipsin)##BC051001|CFD|1675|complement factor D (adipsin)##BC057807|CFD|1675|complement factor D (adipsin)##AK300963|CFD|1675|complement factor D (adipsin)##NM_001928|CFD|1675|complement factor D (adipsin)##BC004554|MED16|10025|mediator complex subunit 16##BC011841|MED16|10025|mediator complex subunit 16##BC017282|MED16|10025|mediator complex subunit 16##AF106934|MED16|10025|mediator complex subunit 16##NM_005481|MED16|10025|mediator complex subunit 16##BC012775|R3HDM4|91300|R3H domain containing 4	0.0	
chr3	15426559	15426720	reg1037009.p2	4.061	+	BC006169 NM_001018009	-43752	-	TSC_hg19_v1_chr3_-_15374094 AL117422 AK313167 NM_004844	-52542	-	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	-52698	-	TSC_hg19_v1_chr3_-_15469037 BC022400 AK057791 NM_152396 AK293370	42379	-	TSC_hg19_v1_chr3_+_15469073 NM_033083 AK312330 AK304697 BC041329 AF272973 CU691982	42529	+	AK128401 NM_080538	113739	-	BC006169|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_001018009|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AL117422|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AK313167|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_004844|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC022400|METTL6|131965|methyltransferase like 6##AK057791|METTL6|131965|methyltransferase like 6##NM_152396|METTL6|131965|methyltransferase like 6##AK293370|METTL6|131965|methyltransferase like 6##NM_033083|EAF1|85403|ELL associated factor 1##AK312330|EAF1|85403|ELL associated factor 1##AK304697|EAF1|85403|ELL associated factor 1##BC041329|EAF1|85403|ELL associated factor 1##AF272973|EAF1|85403|ELL associated factor 1##AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	0.0	
chr6	52285092	52285272	reg1030569.p2	4.061	+	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	-104	+	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	-58225	+	TSC_hg19_v1_chr6_-_52149551 D38073 AK299566 NM_002388 AK301704	-135603	-	AK297632 NM_001172420	622	+	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	156576	-	TSC_hg19_v1_chr6_-_52441859 AK291751 AB621814 BC028121 NM_012288	156669	-	NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##D38073|MCM3|4172|minichromosome maintenance complex component 3##AK299566|MCM3|4172|minichromosome maintenance complex component 3##NM_002388|MCM3|4172|minichromosome maintenance complex component 3##AK301704|MCM3|4172|minichromosome maintenance complex component 3##AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2##AK291751|TRAM2|9697|translocation associated membrane protein 2##BC028121|TRAM2|9697|translocation associated membrane protein 2##NM_012288|TRAM2|9697|translocation associated membrane protein 2	0.0	
chrX	102719184	102719288	reg1017104.p1	4.061	+	AF187064 M38188 NM_014380	-87128	+	TSC_hg19_v1_chrX_+_102631465 AK315371 AK057859 BC051713 AY833562 BC003190	-87773	+	NM_206915 NM_206917 TSC_hg19_v1_chrX_+_102631313	-87936	+	AF422143 NM_080879	55180	-	TSC_hg19_v1_chrX_+_102840485 NM_001006935 NM_001006937 NM_024863 AL833640 AK024827 AK225117 Z36792 AK093021 AX747862 AF271783 AY885169 BC012296	121219	+	BC008703 NM_001006933 NM_032926 BC007622 TSC_hg19_v1_chrX_+_102862898 AK098494 AF163263	143633	+	AF187064|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##M38188|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##NM_014380|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AK315371|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AK057859|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##BC051713|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AY833562|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##BC003190|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##NM_206915|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##NM_206917|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AF422143|RAB40A|142684|RAB40A, member RAS oncogene family##NM_080879|RAB40A|142684|RAB40A, member RAS oncogene family##NM_001006935|TCEAL4|79921|transcription elongation factor A (SII)-like 4##NM_001006937|TCEAL4|79921|transcription elongation factor A (SII)-like 4##NM_024863|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AL833640|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AK024827|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AK225117|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AK093021|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AF271783|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AY885169|TCEAL4|79921|transcription elongation factor A (SII)-like 4##BC012296|TCEAL4|79921|transcription elongation factor A (SII)-like 4##BC008703|TCEAL3|85012|transcription elongation factor A (SII)-like 3##NM_001006933|TCEAL3|85012|transcription elongation factor A (SII)-like 3##NM_032926|TCEAL3|85012|transcription elongation factor A (SII)-like 3##BC007622|TCEAL3|85012|transcription elongation factor A (SII)-like 3##AK098494|TCEAL3|85012|transcription elongation factor A (SII)-like 3##AF163263|TCEAL3|85012|transcription elongation factor A (SII)-like 3	0.023036	
chrX	106918259	106918385	reg1033138.p2	4.061	+	AK307748 AK312706 AK316467 TSC_hg19_v1_chrX_+_106871744 AK297968 BC001605 X15331 AK223169 DQ895833 EU176362 AB464022 CU674782	-46524	+	NM_001204402 NM_002764 TSC_hg19_v1_chrX_+_106871719 D00860	-46627	+	BC033510 NM_001169154 NM_173494	-468461	+	BC018148 Z50781 NM_001015881	41331	-	CR533450 EU831656 EU831739 TSC_hg19_v1_chrX_-_106960193 AK311834 AY007119 AK127938	41807	-	AF153603 AF228339 AB025432 AF183393 BC072446 TSC_hg19_v1_chrX_-_106960293 AL110191 NM_004089 CR933650	41959	-	AK307748|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK312706|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK316467|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK297968|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC001605|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##X15331|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK223169|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##DQ895833|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##EU176362|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##NM_001204402|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##NM_002764|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##D00860|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC033510|CXorf41|139212|chromosome X open reading frame 41##NM_001169154|CXorf41|139212|chromosome X open reading frame 41##NM_173494|CXorf41|139212|chromosome X open reading frame 41##BC018148|TSC22D3|1831|TSC22 domain family, member 3##Z50781|TSC22D3|1831|TSC22 domain family, member 3##NM_001015881|TSC22D3|1831|TSC22 domain family, member 3##CR533450|TSC22D3|1831|TSC22 domain family, member 3##EU831656|TSC22D3|1831|TSC22 domain family, member 3##EU831739|TSC22D3|1831|TSC22 domain family, member 3##AK311834|TSC22D3|1831|TSC22 domain family, member 3##AY007119|TSC22D3|1831|TSC22 domain family, member 3##AK127938|TSC22D3|1831|TSC22 domain family, member 3##AF153603|TSC22D3|1831|TSC22 domain family, member 3##AF228339|TSC22D3|1831|TSC22 domain family, member 3##AB025432|TSC22D3|1831|TSC22 domain family, member 3##AF183393|TSC22D3|1831|TSC22 domain family, member 3##BC072446|TSC22D3|1831|TSC22 domain family, member 3##AL110191|TSC22D3|1831|TSC22 domain family, member 3##NM_004089|TSC22D3|1831|TSC22 domain family, member 3##CR933650|TSC22D3|1831|TSC22 domain family, member 3	0.0	
chr10	22725828	22725971	reg1026616.p1	4.060	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-91443	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-115734	+	TSC_hg19_v1_chr10_+_22605316 NM_001204062 NM_012071 BX647275 AF201948 BC022898 AF078848 AK128789 AK313235 AK295109 AY542159	-120574	+	TSC_hg19_v1_chr10_+_22726003 AK295718	100	+	AK294817 TSC_hg19_v1_chr10_-_23003038	277138	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	277591	-	NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##NM_001204062|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough##NM_012071|COMMD3|23412|COMM domain containing 3##BX647275|COMMD3|23412|COMM domain containing 3##AF201948|COMMD3|23412|COMM domain containing 3##BC022898|COMMD3|23412|COMM domain containing 3##AF078848|COMMD3|23412|COMM domain containing 3##AK128789|COMMD3|23412|COMM domain containing 3##AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough##AY542159|COMMD3|23412|COMM domain containing 3##AK295718|LOC100289455|100289455|uncharacterized LOC100289455##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha	0.0	
chr11	118868511	118868629	reg1030849.p3	4.060	+	AB094092 NM_181721 BC028191 BC125040 BC038969	-26092	+	NM_006760 Y13645 BC113900 AY455312 AB009454	-41507	+	AB094091 NM_182557	-86958	-	TSC_hg19_v1_chr11_+_118868847 AB094093 NM_198489	279	+	TSC_hg19_v1_chr11_+_118868864 BC126469 BC126471 BC144208 BC144209 BC144210 HQ258386	314	+	BC004986 TSC_hg19_v1_chr11_-_118889072 AK311883 M64716 D28369 NM_001028	20488	-	AB094092|FOXR1|283150|forkhead box R1##NM_181721|FOXR1|283150|forkhead box R1##BC028191|FOXR1|283150|forkhead box R1##BC125040|FOXR1|283150|forkhead box R1##BC038969|FOXR1|283150|forkhead box R1##NM_006760|UPK2|7379|uroplakin 2##Y13645|UPK2|7379|uroplakin 2##BC113900|UPK2|7379|uroplakin 2##AY455312|UPK2|7379|uroplakin 2##AB009454|UPK2|7379|uroplakin 2##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like##AB094093|CCDC84|338657|coiled-coil domain containing 84##NM_198489|CCDC84|338657|coiled-coil domain containing 84##BC126469|CCDC84|338657|coiled-coil domain containing 84##BC126471|CCDC84|338657|coiled-coil domain containing 84##BC144208|CCDC84|338657|coiled-coil domain containing 84##BC144209|CCDC84|338657|coiled-coil domain containing 84##BC144210|CCDC84|338657|coiled-coil domain containing 84##HQ258386|CCDC84|338657|coiled-coil domain containing 84##BC004986|RPS25|6230|ribosomal protein S25##AK311883|RPS25|6230|ribosomal protein S25##M64716|RPS25|6230|ribosomal protein S25##D28369|RPS25|6230|ribosomal protein S25##NM_001028|RPS25|6230|ribosomal protein S25	0.0	
chr11	236765	236835	reg1029610.p1	4.060	+	TSC_hg19_v1_chr11_-_236343 AK074992 AK299438 BC001042 AK301979 AK299009 AK298572 AK301558 NM_001017524 NM_012239 AF083108	-370	-	TSC_hg19_v1_chr11_+_208824 AB464144 AM393435	-27963	+	AL136935 NM_021932 BC121807 BC121808 BC111499 TSC_hg19_v1_chr11_+_208804 AL390088 AK314568 BC094717 AK027461 AK225420	-28125	+	NM_002817 NM_175932	7	+	AK316175 TSC_hg19_v1_chr11_-_236906 AK308681	89	-	TSC_hg19_v1_chr11_+_236975 AK295944 AK094775 AK222895 AB009398 BC001100 AF083245 AK307447 AF107837 BC001747 BX647314 AB528493 DQ892171 DQ895365 AF086708 BT007307	207	+	AK074992|SIRT3|23410|sirtuin 3##AK299438|SIRT3|23410|sirtuin 3##BC001042|SIRT3|23410|sirtuin 3##AK301979|SIRT3|23410|sirtuin 3##AK299009|SIRT3|23410|sirtuin 3##AK298572|SIRT3|23410|sirtuin 3##AK301558|SIRT3|23410|sirtuin 3##NM_001017524|SIRT3|23410|sirtuin 3##NM_012239|SIRT3|23410|sirtuin 3##AF083108|SIRT3|23410|sirtuin 3##AM393435|RIC8A|60626|resistance to inhibitors of cholinesterase 8 homolog A (C. elegans)##AL136935|RIC8A|60626|resistance to inhibitors of cholinesterase 8 homolog A (C. elegans)##NM_021932|RIC8A|60626|resistance to inhibitors of cholinesterase 8 homolog A (C. elegans)##BC121807|RIC8A|60626|resistance to inhibitors of cholinesterase 8 homolog A (C. elegans)##BC121808|RIC8A|60626|resistance to inhibitors of cholinesterase 8 homolog A (C. elegans)##BC111499|RIC8A|60626|resistance to inhibitors of cholinesterase 8 homolog A (C. elegans)##AL390088|RIC8A|60626|resistance to inhibitors of cholinesterase 8 homolog A (C. elegans)##AK314568|RIC8A|60626|resistance to inhibitors of cholinesterase 8 homolog A (C. elegans)##BC094717|RIC8A|60626|resistance to inhibitors of cholinesterase 8 homolog A (C. elegans)##AK027461|RIC8A|60626|resistance to inhibitors of cholinesterase 8 homolog A (C. elegans)##AK225420|RIC8A|60626|resistance to inhibitors of cholinesterase 8 homolog A (C. elegans)##NM_002817|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##NM_175932|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK316175|SIRT3|23410|sirtuin 3##AK308681|SIRT3|23410|sirtuin 3##AK295944|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK094775|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK222895|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AB009398|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001100|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF083245|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK307447|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF107837|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001747|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BX647314|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ892171|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ895365|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF086708|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BT007307|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13	0.0	
chr12	102335560	102335668	reg1028223.p1	4.060	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	-64156	+	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	-64496	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	-111028	-	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	120136	-	TSC_hg19_v1_chr12_-_102455791 BC010889	120163	-	TSC_hg19_v1_chr12_-_102455912 AK314970 AK223339 AF151874 AF155655 NM_016053	120247	-	AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##CR457171|CCDC53|51019|coiled-coil domain containing 53##BC010889|CCDC53|51019|coiled-coil domain containing 53##AK314970|CCDC53|51019|coiled-coil domain containing 53##AK223339|CCDC53|51019|coiled-coil domain containing 53##AF151874|CCDC53|51019|coiled-coil domain containing 53##AF155655|CCDC53|51019|coiled-coil domain containing 53##NM_016053|CCDC53|51019|coiled-coil domain containing 53	0.0	
chr2	118943840	118943988	reg1039775.p2	4.060	+	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-97851	+	TSC_hg19_v1_chr2_-_118771720 NM_019044	-172181	-	TSC_hg19_v1_chr2_-_118771677 BC028609	-172230	-	NM_001426	661844	-	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	755906	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	972490	-	AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##NM_019044|CCDC93|54520|coiled-coil domain containing 93##BC028609|CCDC93|54520|coiled-coil domain containing 93##NM_001426|EN1|2019|engrailed homeobox 1##BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2	0.044084	
chr5	109669239	109669352	reg1038767.p1	4.060	+	AK314090 TSC_hg19_v1_chr5_+_109025749 BC142656 BC142696	-643536	+	D63998 TSC_hg19_v1_chr5_+_109025627	-643654	+	TSC_hg19_v1_chr5_+_109025138 NM_002372	-644150	+	AK296542 BC042563 BX648527 NM_001039763	393112	-	TSC_hg19_v1_chr5_+_110074720 AK091427	405428	+	TSC_hg19_v1_chr5_+_110074741 AK300123 BC017169 NM_138773 M74089 AK290217 AB529063	405485	+	AK314090|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##BC142656|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##BC142696|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##D63998|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##NM_002372|MAN2A1|4124|mannosidase, alpha, class 2A, member 1##AK296542|TMEM232|642987|transmembrane protein 232##BC042563|TMEM232|642987|transmembrane protein 232##BX648527|TMEM232|642987|transmembrane protein 232##NM_001039763|TMEM232|642987|transmembrane protein 232##AK091427|SLC25A46|91137|solute carrier family 25, member 46##AK300123|SLC25A46|91137|solute carrier family 25, member 46##BC017169|SLC25A46|91137|solute carrier family 25, member 46##NM_138773|SLC25A46|91137|solute carrier family 25, member 46##M74089|SLC25A46|91137|solute carrier family 25, member 46##AK290217|SLC25A46|91137|solute carrier family 25, member 46	0.500202	CTCF.p2:-18:0.489
chr5	150089855	150089967	reg1032054.p1	4.060	+	AL136933 TSC_hg19_v1_chr5_-_150080619 BC003402 AK001152 NM_018047	-9279	-	AB463237 AM393639 TSC_hg19_v1_chr5_-_150080561 AK297019	-9344	-	AK313873 NM_001122853 NM_133371 AJ300586	-49489	+	AK125973 NM_001135644 AK299517	48202	-	CU693212 DQ892339 DQ895544 TSC_hg19_v1_chr5_-_150138580 AF195120 AK000299 AK296787 BC026323 AK025873 AK311693 AK307757 NM_001135643 NM_016221	48694	-	AK125286 NM_032947	67596	+	AL136933|RBM22|55696|RNA binding motif protein 22##BC003402|RBM22|55696|RNA binding motif protein 22##AK001152|RBM22|55696|RNA binding motif protein 22##NM_018047|RBM22|55696|RNA binding motif protein 22##AM393639|RBM22|55696|RNA binding motif protein 22##AK297019|RBM22|55696|RNA binding motif protein 22##AK313873|MYOZ3|91977|myozenin 3##NM_001122853|MYOZ3|91977|myozenin 3##NM_133371|MYOZ3|91977|myozenin 3##AJ300586|MYOZ3|91977|myozenin 3##AK125973|DCTN4|51164|dynactin 4 (p62)##NM_001135644|DCTN4|51164|dynactin 4 (p62)##AK299517|DCTN4|51164|dynactin 4 (p62)##DQ892339|DCTN4|51164|dynactin 4 (p62)##DQ895544|DCTN4|51164|dynactin 4 (p62)##AF195120|DCTN4|51164|dynactin 4 (p62)##AK000299|DCTN4|51164|dynactin 4 (p62)##AK296787|DCTN4|51164|dynactin 4 (p62)##BC026323|DCTN4|51164|dynactin 4 (p62)##AK311693|DCTN4|51164|dynactin 4 (p62)##AK307757|DCTN4|51164|dynactin 4 (p62)##NM_001135643|DCTN4|51164|dynactin 4 (p62)##NM_016221|DCTN4|51164|dynactin 4 (p62)##AK125286|C5orf62|85027|chromosome 5 open reading frame 62##NM_032947|C5orf62|85027|chromosome 5 open reading frame 62	0.785291	CTCF.p2:5:0.785
chr6	12364006	12364187	reg1035110.p1	4.060	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	-73503	+	NM_002114	-351373	+	NM_001143948 NM_032744	-584817	-	TSC_hg19_v1_chr6_+_12514301 D28417	150206	+	AK295263 TSC_hg19_v1_chr6_+_12716998	352847	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	352947	+	NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1	0.0	
chr6	150250683	150250806	reg1038131.p1	4.060	+	AY172580 BC096719 BC098152 AY172579 NM_001001788 AK310157	-6544	-	AY359075 NM_001243328	-33550	-	AY054974 AY176317 AY252119 EF489426 AF359243 BC101976 BC103694 AY069961 NM_001243325 NM_001243327 NM_139165	-38642	-	AK299895 AB052906 NM_025217 TSC_hg19_v1_chr6_+_150263162 AX772820 BC034689 AY358665 AF304378 AY026825 CU689938	12420	+	AK292519 AK316582 TSC_hg19_v1_chr6_+_150285142 BC035416 NM_025218 AB052907 AF304377 AF346416 AF425265 AF346595	34418	+	BC131600 AB528849 AY039682 NM_130900	95889	-	AY172580|RAET1G|353091|retinoic acid early transcript 1G##BC096719|RAET1G|353091|retinoic acid early transcript 1G##BC098152|RAET1G|353091|retinoic acid early transcript 1G##AY172579|RAET1G|353091|retinoic acid early transcript 1G##NM_001001788|RAET1G|353091|retinoic acid early transcript 1G##AK310157|RAET1G|353091|retinoic acid early transcript 1G##AY359075|RAET1E|135250|retinoic acid early transcript 1E##NM_001243328|RAET1E|135250|retinoic acid early transcript 1E##AY054974|RAET1E|135250|retinoic acid early transcript 1E##AY176317|RAET1E|135250|retinoic acid early transcript 1E##AY252119|RAET1E|135250|retinoic acid early transcript 1E##EF489426|RAET1E|135250|retinoic acid early transcript 1E##AF359243|RAET1E|135250|retinoic acid early transcript 1E##BC101976|RAET1E|135250|retinoic acid early transcript 1E##BC103694|RAET1E|135250|retinoic acid early transcript 1E##AY069961|RAET1E|135250|retinoic acid early transcript 1E##NM_001243325|RAET1E|135250|retinoic acid early transcript 1E##NM_001243327|RAET1E|135250|retinoic acid early transcript 1E##NM_139165|RAET1E|135250|retinoic acid early transcript 1E##AK299895|ULBP2|80328|UL16 binding protein 2##AB052906|ULBP2|80328|UL16 binding protein 2##NM_025217|ULBP2|80328|UL16 binding protein 2##AX772820|ULBP2|80328|UL16 binding protein 2##BC034689|ULBP2|80328|UL16 binding protein 2##AY358665|ULBP2|80328|UL16 binding protein 2##AF304378|ULBP2|80328|UL16 binding protein 2##AY026825|ULBP2|80328|UL16 binding protein 2##AK292519|ULBP1|80329|UL16 binding protein 1##AK316582|ULBP1|80329|UL16 binding protein 1##BC035416|ULBP1|80329|UL16 binding protein 1##NM_025218|ULBP1|80329|UL16 binding protein 1##AB052907|ULBP1|80329|UL16 binding protein 1##AF304377|ULBP1|80329|UL16 binding protein 1##AF346416|ULBP1|80329|UL16 binding protein 1##AF425265|ULBP1|80329|UL16 binding protein 1##AF346595|ULBP1|80329|UL16 binding protein 1##BC131600|RAET1L|154064|retinoic acid early transcript 1L##AY039682|RAET1L|154064|retinoic acid early transcript 1L##NM_130900|RAET1L|154064|retinoic acid early transcript 1L	0.979021	CTCF.p2:11:0.979
chr6	73335923	73336052	reg1033754.p1	4.060	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	-3926	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	-4098	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	-4417	+	BC004267 NM_001126063	599187	-	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	636879	-	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	636986	+	AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC004267|KHDC1L|100129128|KH homology domain containing 1-like##NM_001126063|KHDC1L|100129128|KH homology domain containing 1-like##BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1	0.0	
chr7	95174434	95174554	reg1034249.p1	4.060	+	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	-59201	+	TSC_hg19_v1_chr7_-_95064341 AB102891 CU692318 AB591009 L48513 BC040010 AF001602 AF001601 BC073739 AK296029 BC093006 BC046160 AK291103 AK308065 AK315209 AK296636 BC009728 NM_000305 NM_001018161 AK301313	-110133	-	L48516 AF320003 AF329433 CU687094 TSC_hg19_v1_chr7_-_95025687 AK301772 BC070374 AK304282 NM_000940	-148838	-	BC040239 AK223328 U54617 TSC_hg19_v1_chr7_-_95225830 AK096428 AK312424 NM_002612	51369	-	NM_001135556 NM_001135557 NM_004411 TSC_hg19_v1_chr7_+_95401890 AK091339 BC032945 AK313148 BC053542 BC037854 AF063228 AK297427 BC022540 AF123074 BC012504	227414	+	CU675453 DQ892851 DQ896098 Y17571 AK294629 TSC_hg19_v1_chr7_-_95951381 BC006566 AJ496569 AK000766 AK222864 AF118838 NM_001160210 NM_014251	776908	-	BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4##AB102891|PON2|5445|paraoxonase 2##L48513|PON2|5445|paraoxonase 2##BC040010|PON2|5445|paraoxonase 2##AF001602|PON2|5445|paraoxonase 2##AF001601|PON2|5445|paraoxonase 2##AK296029|PON2|5445|paraoxonase 2##BC093006|PON2|5445|paraoxonase 2##BC046160|PON2|5445|paraoxonase 2##AK291103|PON2|5445|paraoxonase 2##AK308065|PON2|5445|paraoxonase 2##AK315209|PON2|5445|paraoxonase 2##AK296636|PON2|5445|paraoxonase 2##BC009728|PON2|5445|paraoxonase 2##NM_000305|PON2|5445|paraoxonase 2##NM_001018161|PON2|5445|paraoxonase 2##AK301313|PON2|5445|paraoxonase 2##L48516|PON3|5446|paraoxonase 3##AF320003|PON3|5446|paraoxonase 3##AF329433|PON3|5446|paraoxonase 3##BC070374|PON3|5446|paraoxonase 3##AK304282|PON3|5446|paraoxonase 3##NM_000940|PON3|5446|paraoxonase 3##BC040239|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK223328|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##U54617|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK096428|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##AK312424|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_002612|PDK4|5166|pyruvate dehydrogenase kinase, isozyme 4##NM_001135556|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_001135557|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##NM_004411|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK091339|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC032945|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK313148|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC053542|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC037854|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF063228|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AK297427|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC022540|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##AF123074|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##BC012504|DYNC1I1|1780|dynein, cytoplasmic 1, intermediate chain 1##DQ892851|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##DQ896098|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##Y17571|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK294629|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##BC006566|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AJ496569|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK000766|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AK222864|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##AF118838|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_001160210|SLC25A13|10165|solute carrier family 25, member 13 (citrin)##NM_014251|SLC25A13|10165|solute carrier family 25, member 13 (citrin)	0.068914	
chr9	108175969	108176093	reg1033603.p1	4.060	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	-168964	+	TSC_hg19_v1_chr9_+_108006937 AJ272365	-169080	+	TSC_hg19_v1_chr9_+_108006931 NM_080546	-169118	+	AK309817 TSC_hg19_v1_chr9_+_108210342 NM_001145313 NM_031919 NM_207647 AF088031 AK299350 AK296433 AK299491 AF316830	34232	+	TSC_hg19_v1_chr9_+_108320420 NM_001079802 NM_001198963 NM_006731 AK300840 AK304460 BC058842 AB008226 AB609007	144392	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	248726	+	AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1##AJ272365|SLC44A1|23446|solute carrier family 44, member 1##NM_080546|SLC44A1|23446|solute carrier family 44, member 1##AK309817|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001145313|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_031919|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_207647|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF088031|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299350|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK296433|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299491|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF316830|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001079802|FKTN|2218|fukutin##NM_001198963|FKTN|2218|fukutin##NM_006731|FKTN|2218|fukutin##AK300840|FKTN|2218|fukutin##AK304460|FKTN|2218|fukutin##BC058842|FKTN|2218|fukutin##AB008226|FKTN|2218|fukutin##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2	0.0	
chr10	35438571	35438752	reg1030453.p2	4.059	+	NM_183011 NM_183012 AB590551	-11925	+	NM_181571 NM_183060 BC041810	-22276	+	D14825 TSC_hg19_v1_chr10_+_35416154	-22526	+	AF417234 NM_182771 NM_182772	17793	+	NM_182769 NM_182770 AF417233 AY292864 BC090051 AK301906	25870	+	D14826 NM_182717 NM_182718 NM_182719 NM_182720 AK290612 AF069065 U44836	45424	+	NM_183011|CREM|1390|cAMP responsive element modulator##NM_183012|CREM|1390|cAMP responsive element modulator##NM_181571|CREM|1390|cAMP responsive element modulator##NM_183060|CREM|1390|cAMP responsive element modulator##BC041810|CREM|1390|cAMP responsive element modulator##D14825|CREM|1390|cAMP responsive element modulator##AF417234|CREM|1390|cAMP responsive element modulator##NM_182771|CREM|1390|cAMP responsive element modulator##NM_182772|CREM|1390|cAMP responsive element modulator##NM_182769|CREM|1390|cAMP responsive element modulator##NM_182770|CREM|1390|cAMP responsive element modulator##AF417233|CREM|1390|cAMP responsive element modulator##AY292864|CREM|1390|cAMP responsive element modulator##BC090051|CREM|1390|cAMP responsive element modulator##AK301906|CREM|1390|cAMP responsive element modulator##D14826|CREM|1390|cAMP responsive element modulator##NM_182717|CREM|1390|cAMP responsive element modulator##NM_182718|CREM|1390|cAMP responsive element modulator##NM_182719|CREM|1390|cAMP responsive element modulator##NM_182720|CREM|1390|cAMP responsive element modulator##AK290612|CREM|1390|cAMP responsive element modulator##AF069065|CREM|1390|cAMP responsive element modulator##U44836|CREM|1390|cAMP responsive element modulator	0.0	
chr1	189398771	189398913	reg1036444.p1	4.059	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-2600754	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-2749352	-	M33478 NM_002597	-2968615	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	1047893	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	2728761	+	AY643711 NM_001039152	2887279	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.996148	CTCF.p2:0:0.996
chr12	100452372	100452516	reg1036624.p2	4.059	+	NM_152788	-74013	-	NM_153364 AK312767 BC031221	-410914	+	AK294191 NM_001204067	-903577	-	BC127017 AK125813 TSC_hg19_v1_chr12_-_100536637 BC014891	84105	-	TSC_hg19_v1_chr12_-_100536644 NM_001006947 NM_015054	84204	-	TSC_hg19_v1_chr12_+_100594593 BC015107 NM_022496 AF161399 AK222959 AB038229 AF212251 BC050679 AK023495 AK023684 AK296991 AF175226 CU677213	142151	+	NM_152788|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_153364|FAM71C|196472|family with sequence similarity 71, member C##AK312767|FAM71C|196472|family with sequence similarity 71, member C##BC031221|FAM71C|196472|family with sequence similarity 71, member C##AK294191|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##NM_001204067|ANKS1B|56899|ankyrin repeat and sterile alpha motif domain containing 1B##BC127017|UHRF1BP1L|23074|UHRF1 binding protein 1-like##AK125813|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC014891|UHRF1BP1L|23074|UHRF1 binding protein 1-like##NM_001006947|UHRF1BP1L|23074|UHRF1 binding protein 1-like##NM_015054|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC015107|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##NM_022496|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AF161399|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK222959|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AB038229|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AF212251|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##BC050679|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK023495|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK023684|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK296991|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AF175226|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)	0.070169	
chr14	88700418	88700506	reg1031661.p1	4.059	+	BC029479 TSC_hg19_v1_chr14_+_88490954	-209539	+	NM_003608 TSC_hg19_v1_chr14_+_88471478 AK313797 BC035633 BC071715	-228962	+	NM_001201402	-240454	-	EU978940 EU978941 BC075022 BC075021 AF385399 NM_138318 TSC_hg19_v1_chr14_-_88737268	36754	-	AK290518 TSC_hg19_v1_chr14_-_88789574 AK313499 NM_138317	89112	-	AK315263 TSC_hg19_v1_chr14_-_88793059 EU978938	92541	-	BC029479|LOC283587|283587|uncharacterized LOC283587##NM_003608|GPR65|8477|G protein-coupled receptor 65##AK313797|GPR65|8477|G protein-coupled receptor 65##BC035633|GPR65|8477|G protein-coupled receptor 65##BC071715|GPR65|8477|G protein-coupled receptor 65##NM_001201402|GALC|2581|galactosylceramidase##EU978940|KCNK10|54207|potassium channel, subfamily K, member 10##EU978941|KCNK10|54207|potassium channel, subfamily K, member 10##BC075022|KCNK10|54207|potassium channel, subfamily K, member 10##BC075021|KCNK10|54207|potassium channel, subfamily K, member 10##AF385399|KCNK10|54207|potassium channel, subfamily K, member 10##NM_138318|KCNK10|54207|potassium channel, subfamily K, member 10##AK290518|KCNK10|54207|potassium channel, subfamily K, member 10##AK313499|KCNK10|54207|potassium channel, subfamily K, member 10##NM_138317|KCNK10|54207|potassium channel, subfamily K, member 10##AK315263|KCNK10|54207|potassium channel, subfamily K, member 10##EU978938|KCNK10|54207|potassium channel, subfamily K, member 10	0.591777	CTCF.p2:-10:0.592
chr1	59247524	59247704	reg1018124.p1	4.059	+	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-81862	-	TSC_hg19_v1_chr1_-_59147727 BC017579	-99868	-	NM_002353	-204449	-	TSC_hg19_v1_chr1_-_59248287 BC009874	751	-	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	2121	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	514998	+	BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_002353|TACSTD2|4070|tumor-associated calcium signal transducer 2##BC009874|JUN|3725|jun proto-oncogene##BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing	0.0	
chr17	76156016	76156196	reg1029490.p2	4.059	+	AY358510 NM_001163075	-13673	+	BC023597 NM_007267 TSC_hg19_v1_chr17_-_76128499	-27606	-	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	-29240	+	TSC_hg19_v1_chr17_+_76164661 AJ002308 AY358916 NM_004710 BC000407 BC105992 BC029755 DQ891832 DQ895019	8554	+	AB451268 AB451395 BT006941 AB591021 BC007872 BC007986 BC006484 AK314950 K02581 TSC_hg19_v1_chr17_-_76183133 NM_003258	27073	-	BC132824 NM_001010982 NM_001145526 TSC_hg19_v1_chr17_+_76183442 BC020920 BC142973 BX647783 BX648442 EU832465 EU832546 HQ258157	27317	+	AY358510|C17orf99|100141515|chromosome 17 open reading frame 99##NM_001163075|C17orf99|100141515|chromosome 17 open reading frame 99##BC023597|TMC6|11322|transmembrane channel-like 6##NM_007267|TMC6|11322|transmembrane channel-like 6##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8##AJ002308|SYNGR2|9144|synaptogyrin 2##AY358916|SYNGR2|9144|synaptogyrin 2##NM_004710|SYNGR2|9144|synaptogyrin 2##BC000407|SYNGR2|9144|synaptogyrin 2##BC105992|SYNGR2|9144|synaptogyrin 2##BC029755|SYNGR2|9144|synaptogyrin 2##DQ891832|SYNGR2|9144|synaptogyrin 2##DQ895019|SYNGR2|9144|synaptogyrin 2##AB451268|TK1|7083|thymidine kinase 1, soluble##AB451395|TK1|7083|thymidine kinase 1, soluble##BT006941|TK1|7083|thymidine kinase 1, soluble##BC007872|TK1|7083|thymidine kinase 1, soluble##BC007986|TK1|7083|thymidine kinase 1, soluble##BC006484|TK1|7083|thymidine kinase 1, soluble##AK314950|TK1|7083|thymidine kinase 1, soluble##K02581|TK1|7083|thymidine kinase 1, soluble##NM_003258|TK1|7083|thymidine kinase 1, soluble##BC132824|AFMID|125061|arylformamidase##NM_001010982|AFMID|125061|arylformamidase##NM_001145526|AFMID|125061|arylformamidase##BC020920|AFMID|125061|arylformamidase##BC142973|AFMID|125061|arylformamidase##BX648442|AFMID|125061|arylformamidase##EU832465|AFMID|125061|arylformamidase##EU832546|AFMID|125061|arylformamidase##HQ258157|AFMID|125061|arylformamidase	0.0	
chr2	208147853	208148034	reg1027666.p1	4.059	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-116318	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-117287	-	BC112076 BC112078 NM_173077 AJ422118	-343643	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	246700	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	246778	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	246838	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.0	
chr22	42229114	42229276	reg1036111.p2	4.059	+	TSC_hg19_v1_chr22_+_42229114 BC051799	-83	+	NM_004599 TSC_hg19_v1_chr22_+_42229105	-90	+	TSC_hg19_v1_chr22_+_42196682 NM_024821 AK026002 AK299311 BC017693 CR456484	-32523	+	TSC_hg19_v1_chr22_+_42229253 BC056158 U02031 BC051385 CT841522 AK299914	6	+	TSC_hg19_v1_chr22_+_42229269 CU013184 CU013472 AB463291	76	+	NM_001207020	81475	-	BC051799|SREBF2|6721|sterol regulatory element binding transcription factor 2##NM_004599|SREBF2|6721|sterol regulatory element binding transcription factor 2##NM_024821|CCDC134|79879|coiled-coil domain containing 134##AK026002|CCDC134|79879|coiled-coil domain containing 134##AK299311|CCDC134|79879|coiled-coil domain containing 134##BC017693|CCDC134|79879|coiled-coil domain containing 134##CR456484|CCDC134|79879|coiled-coil domain containing 134##BC056158|SREBF2|6721|sterol regulatory element binding transcription factor 2##U02031|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051385|SREBF2|6721|sterol regulatory element binding transcription factor 2##CT841522|SREBF2|6721|sterol regulatory element binding transcription factor 2##AK299914|SREBF2|6721|sterol regulatory element binding transcription factor 2##CU013184|SREBF2|6721|sterol regulatory element binding transcription factor 2##CU013472|SREBF2|6721|sterol regulatory element binding transcription factor 2##NM_001207020|SHISA8|440829|shisa homolog 8 (Xenopus laevis)	0.0	
chr4	186231106	186231244	reg1035679.p2	4.059	+	NM_031953	-99892	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	-106031	-	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	-166705	+	AB037746 BC152444 NM_018409 AL161975	68986	-	TSC_hg19_v1_chr4_+_186317840 AY296056 NM_181726	86664	+	TSC_hg19_v1_chr4_+_186317892 BC088376	86720	+	NM_031953|SNX25|83891|sorting nexin 25##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB037746|LRP2BP|55805|LRP2 binding protein##BC152444|LRP2BP|55805|LRP2 binding protein##NM_018409|LRP2BP|55805|LRP2 binding protein##AL161975|LRP2BP|55805|LRP2 binding protein##AY296056|ANKRD37|353322|ankyrin repeat domain 37##NM_181726|ANKRD37|353322|ankyrin repeat domain 37##BC088376|ANKRD37|353322|ankyrin repeat domain 37	0.0	
chr7	112023778	112023871	reg1029463.p2	4.059	+	TSC_hg19_v1_chr7_+_111846750 AL713791 AK314630 BC020626 AK027128 AF308819 CU676586	-177054	+	AF209198 NM_021994 TSC_hg19_v1_chr7_+_111846702	-177152	+	TSC_hg19_v1_chr7_-_111846458 AK095906 AK309605 NM_014705	-177362	-	TSC_hg19_v1_chr7_+_112063228 AK313211 NM_001007245 NM_001197080 AK315967 AK308066	39368	+	TSC_hg19_v1_chr7_+_112090514 NM_001550 AK225222 BC001272 Y10313 AK297509 AB527574 BT019889 BT019890 CU674634	66779	+	NM_001197079	68288	+	AL713791|ZNF277|11179|zinc finger protein 277##AK314630|ZNF277|11179|zinc finger protein 277##BC020626|ZNF277|11179|zinc finger protein 277##AK027128|ZNF277|11179|zinc finger protein 277##AF308819|ZNF277|11179|zinc finger protein 277##AF209198|ZNF277|11179|zinc finger protein 277##NM_021994|ZNF277|11179|zinc finger protein 277##AK095906|DOCK4|9732|dedicator of cytokinesis 4##AK309605|DOCK4|9732|dedicator of cytokinesis 4##NM_014705|DOCK4|9732|dedicator of cytokinesis 4##AK313211|IFRD1|3475|interferon-related developmental regulator 1##NM_001007245|IFRD1|3475|interferon-related developmental regulator 1##NM_001197080|IFRD1|3475|interferon-related developmental regulator 1##AK315967|IFRD1|3475|interferon-related developmental regulator 1##AK308066|IFRD1|3475|interferon-related developmental regulator 1##NM_001550|IFRD1|3475|interferon-related developmental regulator 1##AK225222|IFRD1|3475|interferon-related developmental regulator 1##BC001272|IFRD1|3475|interferon-related developmental regulator 1##AK297509|IFRD1|3475|interferon-related developmental regulator 1##BT019889|IFRD1|3475|interferon-related developmental regulator 1##BT019890|IFRD1|3475|interferon-related developmental regulator 1##NM_001197079|IFRD1|3475|interferon-related developmental regulator 1	0.144586	
chr8	142154130	142154310	reg1022260.p2	4.059	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-15483	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-142964	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-508596	-	AK128212 NM_001080431	84452	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	109970	-	NM_005293	223144	-	NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.0	
chr15	37028577	37028664	reg1040336.p1	4.058	+	NM_032499	-95815	+	TSC_hg19_v1_chr15_+_36871914 NM_001130010 AK026504 BC006254	-156721	+	CU688170 TSC_hg19_v1_chr15_-_35838365 BC066652 AK094007 AL833427 AX748407 AK125017 NM_001141972 NM_080650	-1190234	-	CU674744 EU831754 EU831831 TSC_hg19_v1_chr15_-_37390403 AK294411 AK311546 AK056038 NM_172315	361846	-	AK056620 NM_172316 AB463111 CU690674 EU446635 EU831824 AK055936	363019	-	TSC_hg19_v1_chr15_-_37391935 AF178948 AF179896 AF179897 AF179898 AF179899	363299	-	NM_032499|C15orf41|84529|chromosome 15 open reading frame 41##NM_001130010|C15orf41|84529|chromosome 15 open reading frame 41##AK026504|C15orf41|84529|chromosome 15 open reading frame 41##BC006254|C15orf41|84529|chromosome 15 open reading frame 41##BC066652|ATPBD4|89978|ATP binding domain 4##AK094007|ATPBD4|89978|ATP binding domain 4##AL833427|ATPBD4|89978|ATP binding domain 4##AK125017|ATPBD4|89978|ATP binding domain 4##NM_001141972|ATPBD4|89978|ATP binding domain 4##NM_080650|ATPBD4|89978|ATP binding domain 4##EU831754|MEIS2|4212|Meis homeobox 2##EU831831|MEIS2|4212|Meis homeobox 2##AK294411|MEIS2|4212|Meis homeobox 2##AK311546|MEIS2|4212|Meis homeobox 2##AK056038|MEIS2|4212|Meis homeobox 2##NM_172315|MEIS2|4212|Meis homeobox 2##AK056620|MEIS2|4212|Meis homeobox 2##NM_172316|MEIS2|4212|Meis homeobox 2##EU446635|MEIS2|4212|Meis homeobox 2##EU831824|MEIS2|4212|Meis homeobox 2##AK055936|MEIS2|4212|Meis homeobox 2##AF178948|MEIS2|4212|Meis homeobox 2##AF179896|MEIS2|4212|Meis homeobox 2##AF179897|MEIS2|4212|Meis homeobox 2##AF179898|MEIS2|4212|Meis homeobox 2##AF179899|MEIS2|4212|Meis homeobox 2	0.0	
chr2	122353887	122353978	reg1033415.p1	4.058	+	AK297259 TSC_hg19_v1_chr2_-_122247924	-106013	-	TSC_hg19_v1_chr2_-_122159142 CR749627	-194777	-	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	-311159	-	TSC_hg19_v1_chr2_-_122407024 BC112940 AK091140 AX746802 BC132723 BC144107 AK299331 AJ288057 NM_001142273 NM_001142274 NM_001207051 NM_015282	53090	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	53713	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	140533	-	AK297259|CLASP1|23332|cytoplasmic linker associated protein 1##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##BC112940|CLASP1|23332|cytoplasmic linker associated protein 1##AK091140|CLASP1|23332|cytoplasmic linker associated protein 1##BC132723|CLASP1|23332|cytoplasmic linker associated protein 1##BC144107|CLASP1|23332|cytoplasmic linker associated protein 1##AK299331|CLASP1|23332|cytoplasmic linker associated protein 1##AJ288057|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142273|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142274|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001207051|CLASP1|23332|cytoplasmic linker associated protein 1##NM_015282|CLASP1|23332|cytoplasmic linker associated protein 1##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein	0.532858	CTCF.p2:9:0.533
chr21	30606000	30606090	reg1033514.p2	4.058	+	TSC_hg19_v1_chr21_+_30517918 AK309998 EF219160	-88135	+	AY171599 NM_020152	-153173	+	AK308063 TSC_hg19_v1_chr21_-_30445995 AK298801 BC072001 BC005220 NM_006585	-160056	-	TSC_hg19_v1_chr21_+_30671158 AK291021 AB002803	65119	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	65175	+	TSC_hg19_v1_chr21_+_30671242 AK313791 BC063307	65196	+	AK309998|C21orf7|56911|chromosome 21 open reading frame 7##EF219160|C21orf7|56911|chromosome 21 open reading frame 7##AY171599|C21orf7|56911|chromosome 21 open reading frame 7##NM_020152|C21orf7|56911|chromosome 21 open reading frame 7##AK308063|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK298801|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC072001|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC005220|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##NM_006585|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK291021|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AB002803|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AK313791|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC063307|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	0.0	
chr5	150503726	150503906	reg1032779.p1	4.058	+	AK290999 NM_001252390	-36596	-	BC014008 AB252970 AB252971 AB252974 AB252982 AJ011895 AJ011896 AK298685 NM_001252391 NM_001252392	-37095	-	TSC_hg19_v1_chr5_-_150460599 AB252972 AB252973 AB252975 NM_001252385 NM_001252386 NM_001252393 NM_006058 AY012155	-43193	-	AK303078 NM_001193544	17391	-	J03578 BC017046 TSC_hg19_v1_chr5_-_150537299	33465	-	TSC_hg19_v1_chr5_-_150537327 AK126836 AK290672 AK130077 Y00097 AK298582	33503	-	AK290999|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252390|TNIP1|10318|TNFAIP3 interacting protein 1##BC014008|TNIP1|10318|TNFAIP3 interacting protein 1##AB252970|TNIP1|10318|TNFAIP3 interacting protein 1##AB252971|TNIP1|10318|TNFAIP3 interacting protein 1##AB252982|TNIP1|10318|TNFAIP3 interacting protein 1##AJ011895|TNIP1|10318|TNFAIP3 interacting protein 1##AJ011896|TNIP1|10318|TNFAIP3 interacting protein 1##AK298685|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252391|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252392|TNIP1|10318|TNFAIP3 interacting protein 1##AB252972|TNIP1|10318|TNFAIP3 interacting protein 1##AB252973|TNIP1|10318|TNFAIP3 interacting protein 1##AB252975|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252385|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252386|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252393|TNIP1|10318|TNFAIP3 interacting protein 1##NM_006058|TNIP1|10318|TNFAIP3 interacting protein 1##AY012155|TNIP1|10318|TNFAIP3 interacting protein 1##AK303078|ANXA6|309|annexin A6##NM_001193544|ANXA6|309|annexin A6##J03578|ANXA6|309|annexin A6##BC017046|ANXA6|309|annexin A6##AK126836|ANXA6|309|annexin A6##AK290672|ANXA6|309|annexin A6##AK130077|ANXA6|309|annexin A6##Y00097|ANXA6|309|annexin A6##AK298582|ANXA6|309|annexin A6	0.0	
chr6	138018582	138018718	reg1030648.p1	4.058	+	BC051352 AK096362 NM_175747	-203125	-	TSC_hg19_v1_chr6_-_137540556 NM_000416	-478092	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-478105	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	169887	+	TSC_hg19_v1_chr6_-_138189314 AK124173	170700	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	409918	-	BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector	0.045161	
chr9	87671236	87671310	reg1031419.p2	4.058	+	U12140 TSC_hg19_v1_chr9_+_87285349	-385941	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-386521	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-386577	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	685598	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	884801	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	884905	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.0	
chr10	104822778	104822891	reg1033779.p1	4.057	+	TSC_hg19_v1_chr10_+_104678078 BC021222 AK023479 NM_017649 NM_199076 NM_199077	-144777	+	NM_020682 AK057833 AK225972 AF226730 AK309737 BC119637 BC119638	-193577	+	NM_001136200 NM_144591 AL832477 TSC_hg19_v1_chr10_+_104614015 AK098071 BC015994 BC040069 AK311742	-208833	+	BX648078 TSC_hg19_v1_chr10_-_104953030 BC001595 AK127670 AK291667 AK312517 D38524 NM_001134373 NM_012229	130213	-	BC157875 BC171885 NM_001143909 BC137242 BC137243 BC157829 BC171806	182839	+	TSC_hg19_v1_chr10_+_105036894 BC006359 NM_032727 S78296 DQ892733 DQ895980	214039	+	BC021222|CNNM2|54805|cyclin M2##AK023479|CNNM2|54805|cyclin M2##NM_017649|CNNM2|54805|cyclin M2##NM_199076|CNNM2|54805|cyclin M2##NM_199077|CNNM2|54805|cyclin M2##NM_020682|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK057833|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK225972|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AF226730|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##AK309737|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119637|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##BC119638|AS3MT|57412|arsenic (+3 oxidation state) methyltransferase##NM_001136200|C10orf32|119032|chromosome 10 open reading frame 32##NM_144591|C10orf32|119032|chromosome 10 open reading frame 32##AL832477|C10orf32|119032|chromosome 10 open reading frame 32##AK098071|C10orf32|119032|chromosome 10 open reading frame 32##BC015994|C10orf32|119032|chromosome 10 open reading frame 32##BC040069|C10orf32-AS3MT|100528007|C10orf32-AS3MT readthrough##AK311742|C10orf32|119032|chromosome 10 open reading frame 32##BX648078|NT5C2|22978|5'-nucleotidase, cytosolic II##BC001595|NT5C2|22978|5'-nucleotidase, cytosolic II##AK127670|NT5C2|22978|5'-nucleotidase, cytosolic II##AK291667|NT5C2|22978|5'-nucleotidase, cytosolic II##AK312517|NT5C2|22978|5'-nucleotidase, cytosolic II##D38524|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_001134373|NT5C2|22978|5'-nucleotidase, cytosolic II##NM_012229|NT5C2|22978|5'-nucleotidase, cytosolic II##BC157875|LOC729020|729020|rcRPE##BC171885|LOC729020|729020|rcRPE##NM_001143909|LOC729020|729020|rcRPE##BC137242|LOC729020|729020|rcRPE##BC137243|LOC729020|729020|rcRPE##BC157829|LOC729020|729020|rcRPE##BC171806|LOC729020|729020|rcRPE##BC006359|INA|9118|internexin neuronal intermediate filament protein, alpha##NM_032727|INA|9118|internexin neuronal intermediate filament protein, alpha##S78296|INA|9118|internexin neuronal intermediate filament protein, alpha##DQ892733|INA|9118|internexin neuronal intermediate filament protein, alpha##DQ895980|INA|9118|internexin neuronal intermediate filament protein, alpha	0.980155	CTCF.p2:4:0.980
chr11	124707478	124707658	reg1007714.p3	4.057	+	TSC_hg19_v1_chr11_-_124670286 BC064919 AK026995 NM_024631	-37249	-	TSC_hg19_v1_chr11_-_124670282 AK303902	-37299	-	CU677755 DQ891768 DQ894952 BC016868 TSC_hg19_v1_chr11_-_124632187 AF361746 AY358382 AK075396 AK301160 AK314710 NM_138961	-75432	-	AY509035 TSC_hg19_v1_chr11_+_124735327 AK056544 NM_022370 AK291045	27757	+	TSC_hg19_v1_chr11_+_124746737 AK024697 AK225076 AK298792 AK295475	39162	+	AY358083 AK074163 AK302628 BC064643 BC039602 BC111562 BC111748 AK027852 AK289769 AF361473 NM_019055	60187	-	BC064919|C11orf61|79684|chromosome 11 open reading frame 61##AK026995|C11orf61|79684|chromosome 11 open reading frame 61##NM_024631|C11orf61|79684|chromosome 11 open reading frame 61##AK303902|C11orf61|79684|chromosome 11 open reading frame 61##DQ891768|ESAM|90952|endothelial cell adhesion molecule##DQ894952|ESAM|90952|endothelial cell adhesion molecule##BC016868|ESAM|90952|endothelial cell adhesion molecule##AF361746|ESAM|90952|endothelial cell adhesion molecule##AY358382|ESAM|90952|endothelial cell adhesion molecule##AK075396|ESAM|90952|endothelial cell adhesion molecule##AK301160|ESAM|90952|endothelial cell adhesion molecule##AK314710|ESAM|90952|endothelial cell adhesion molecule##NM_138961|ESAM|90952|endothelial cell adhesion molecule##AY509035|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##NM_022370|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK291045|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK024697|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK225076|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK298792|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK295475|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AY358083|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK074163|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK302628|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC064643|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC039602|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC111562|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC111748|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK027852|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK289769|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AF361473|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##NM_019055|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)	0.0	
chr1	2718252	2718422	reg1029265.p1	4.057	+	NM_001242672	-12108	-	AK093058 AX747891 NM_033467 TSC_hg19_v1_chr1_-_2564497	-153872	-	TSC_hg19_v1_chr1_+_2518534 AK094901	-199823	+	NM_080431 AK058153 AK314500 BC029499	219718	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	267439	+	TSC_hg19_v1_chr1_+_3371228 NM_014448 AK095984	652868	+	NM_001242672|TTC34|100287898|tetratricopeptide repeat domain 34##AK093058|MMEL1|79258|membrane metallo-endopeptidase-like 1##NM_033467|MMEL1|79258|membrane metallo-endopeptidase-like 1##AK094901|FAM213B|127281|family with sequence similarity 213, member B##NM_080431|ACTRT2|140625|actin-related protein T2##AK058153|ACTRT2|140625|actin-related protein T2##AK314500|ACTRT2|140625|actin-related protein T2##BC029499|ACTRT2|140625|actin-related protein T2##NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16##NM_014448|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK095984|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16	0.052827	
chr13	43123090	43123265	reg1024626.p2	4.057	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	-276892	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	-410967	+	NM_152910 NM_178009 AB078967 AB078968	-500312	+	BC040889 NM_033012	13694	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	25157	+	NM_182508 AK310859 AK098238 BC093659 BC112237	232547	+	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30	0.0	
chr15	101458141	101458212	reg1000524.p1	4.057	+	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-38105	+	TSC_hg19_v1_chr15_+_101420006 NM_000693	-38170	+	TSC_hg19_v1_chr15_+_101390032 AK056534	-68143	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	1298	-	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	1336	+	AB071402 TSC_hg19_v1_chr15_-_101791795	333560	-	AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##NM_000693|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK056534|LOC145757|145757|uncharacterized LOC145757##NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AB071402|CHSY1|22856|chondroitin sulfate synthase 1	0.0	
chr15	31548009	31548095	reg1029878.p1	4.057	+	NM_001243538	-25003	-	GQ502181 HM135791 NM_001252020	-94624	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-154135	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	71286	+	AJ430383 NM_130901	399489	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	614777	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.026972	
chr15	66648846	66649007	reg1034421.p1	4.057	+	TSC_hg19_v1_chr15_+_66585931 NM_001143688 AK095407	-63027	+	NM_133375 AK295392 BC022089	-63281	+	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	-102849	-	AK000523 TSC_hg19_v1_chr15_-_66649024 AK299233 BC000870 NM_017858	97	-	TSC_hg19_v1_chr15_+_66679214 NM_002755	30236	+	TSC_hg19_v1_chr15_+_66679272 AK291500 AK312356	30347	+	NM_001143688|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK095407|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##AK000523|TIPIN|54962|TIMELESS interacting protein##AK299233|TIPIN|54962|TIMELESS interacting protein##BC000870|TIPIN|54962|TIMELESS interacting protein##NM_017858|TIPIN|54962|TIMELESS interacting protein##NM_002755|MAP2K1|5604|mitogen-activated protein kinase kinase 1##AK291500|MAP2K1|5604|mitogen-activated protein kinase kinase 1##AK312356|MAP2K1|5604|mitogen-activated protein kinase kinase 1	0.0	
chr16	57453058	57453238	reg1006612.p2	4.057	+	BC069107 NM_002987 BC112066 BC112068	-14453	+	TSC_hg19_v1_chr16_+_57406401 AK223351 AK313806 U84487 U91835 BC001163 BC016164 NM_002996 AB590256 DQ890704 DQ891871 DQ893888 DQ895059 CU674588 CR457426	-46709	+	AK222692 TSC_hg19_v1_chr16_+_57406382	-46763	+	BC036316 TSC_hg19_v1_chr16_-_57481298 AK074263 BC002568 AK292281 AL136613 BC071740 BC024196 AF248964 NM_020313 BC067303	28206	-	AK075438 NM_020312 TSC_hg19_v1_chr16_+_57481390 AK295793 BC064946 AK293585 BC029341 BC054340 AF161444 AK290627 AK303527 CU687976 EU832506 EU832587	28228	+	TSC_hg19_v1_chr16_+_57496563 NM_032940	43410	+	BC069107|CCL17|6361|chemokine (C-C motif) ligand 17##NM_002987|CCL17|6361|chemokine (C-C motif) ligand 17##BC112066|CCL17|6361|chemokine (C-C motif) ligand 17##BC112068|CCL17|6361|chemokine (C-C motif) ligand 17##AK223351|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK313806|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U84487|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U91835|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC001163|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC016164|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002996|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ890704|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ891871|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ893888|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ895059|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##CR457426|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK222692|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK075438|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_020312|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK295793|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC064946|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK293585|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC029341|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC054340|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AF161444|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK290627|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK303527|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832506|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832587|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	0.0	
chr16	89034869	89034944	reg1039115.p2	4.057	+	AB010420 NM_175931	-27300	-	AB528852 EU190484 BC130001 BC130002 NM_001080487	-101865	-	TSC_hg19_v1_chr16_+_88923536 NM_016209 AF089106 AX771012 AK311885 BC105809 AK126779 AF161524 AK310805 AX771013 BC018024 AX771014 BC011369	-111383	+	AB527670 EU446890 BC047019 AK314766 AB010419 BC062624 NM_005187 TSC_hg19_v1_chr16_-_89043569	8497	-	TSC_hg19_v1_chr16_-_89119364 AK055272	84463	-	NM_001127214 NM_001243279 NM_174917 TSC_hg19_v1_chr16_+_89160259	125331	+	AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##EU190484|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130001|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130002|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001080487|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_016209|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF089106|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771012|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK311885|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC105809|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK126779|TRAPPC2L|51693|trafficking protein particle complex 2-like##AF161524|TRAPPC2L|51693|trafficking protein particle complex 2-like##AK310805|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771013|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC018024|TRAPPC2L|51693|trafficking protein particle complex 2-like##AX771014|TRAPPC2L|51693|trafficking protein particle complex 2-like##BC011369|TRAPPC2L|51693|trafficking protein particle complex 2-like##EU446890|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC047019|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AK314766|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010419|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC062624|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_005187|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_001127214|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001243279|ACSF3|197322|acyl-CoA synthetase family member 3##NM_174917|ACSF3|197322|acyl-CoA synthetase family member 3	0.687683	CTCF.p2:55:0.671
chr17	62981896	62982070	reg1028608.p1	4.057	+	TSC_hg19_v1_chr17_-_62971685 BX537538 AK056627 BC063466 AK311317	-10363	-	TSC_hg19_v1_chr17_-_62915587 AK294371	-66387	-	AB011135 NM_199340	-67081	-	TSC_hg19_v1_chr17_-_63009302 AK026902	27323	-	TSC_hg19_v1_chr17_-_63052724 AB528470 AF493902 CU691408 DQ893572 DQ894448 AK313672	70735	-	TSC_hg19_v1_chr17_-_63052756 L22075 BC036756	70777	-	BX537538|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK056627|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##BC063466|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK311317|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3##NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AF493902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ893572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ894448|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AK313672|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##L22075|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC036756|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	0.0	
chr17	75401011	75401170	reg1030985.p1	4.057	+	AB023208 NM_001113494 AJ312322	-28921	+	TSC_hg19_v1_chr17_+_75369418 AK304143	-31665	+	TSC_hg19_v1_chr17_+_75369236 AJ312319 NM_001113493	-31837	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	45555	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	45692	+	AK299828 TSC_hg19_v1_chr17_+_75447450	46299	+	AB023208|SEPT9|10801|septin 9##NM_001113494|SEPT9|10801|septin 9##AJ312322|SEPT9|10801|septin 9##AK304143|SEPT9|10801|septin 9##AJ312319|SEPT9|10801|septin 9##NM_001113493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9	0.020564	
chr19	34850044	34850166	reg1031475.p1	4.057	+	TSC_hg19_v1_chr19_+_34745535 NM_014686 AB002353 BX648432	-104595	+	TSC_hg19_v1_chr19_+_34710343 AL117499	-139725	+	TSC_hg19_v1_chr19_+_34663440 AL834398 AK027643 AB069974 AB069975	-186637	+	TSC_hg19_v1_chr19_+_34856083 NM_001184722 AK294396 NM_000175	5735	+	TSC_hg19_v1_chr19_+_34856150 AB209575 AK301103	6033	+	AK293446 TSC_hg19_v1_chr19_+_34856160 BC004982 K03515 X16539 DQ892924 DQ896173	6057	+	NM_014686|KIAA0355|9710|KIAA0355##AB002353|KIAA0355|9710|KIAA0355##AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AL834398|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK027643|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069974|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069975|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_001184722|GPI|2821|glucose-6-phosphate isomerase##AK294396|GPI|2821|glucose-6-phosphate isomerase##NM_000175|GPI|2821|glucose-6-phosphate isomerase##AB209575|GPI|2821|glucose-6-phosphate isomerase##AK301103|GPI|2821|glucose-6-phosphate isomerase##AK293446|GPI|2821|glucose-6-phosphate isomerase##BC004982|GPI|2821|glucose-6-phosphate isomerase##K03515|GPI|2821|glucose-6-phosphate isomerase##X16539|GPI|2821|glucose-6-phosphate isomerase##DQ892924|GPI|2821|glucose-6-phosphate isomerase##DQ896173|GPI|2821|glucose-6-phosphate isomerase	0.455991	CTCF.p2:29:0.456
chr22	36773255	36773436	reg1033538.p1	4.057	+	D11393 TSC_hg19_v1_chr22_-_36697021	-76331	-	BC011915 TSC_hg19_v1_chr22_-_36681760	-91582	-	TSC_hg19_v1_chr22_+_36649178 AF305224 AK303919 AK313752 AK298053 BC113867 BC114475 BC127186 BC143038 BC143039 BC017331 AK296099	-124156	+	TSC_hg19_v1_chr22_-_36783906 AB290175 CR456526	10541	-	TSC_hg19_v1_chr22_-_36783943 M81105	10607	-	AK131080 TSC_hg19_v1_chr22_-_36783982 BC049849	10634	-	D11393|MYH9|4627|myosin, heavy chain 9, non-muscle##BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle##AF305224|APOL1|8542|apolipoprotein L, 1##AK303919|APOL1|8542|apolipoprotein L, 1##AK313752|APOL1|8542|apolipoprotein L, 1##AK298053|APOL1|8542|apolipoprotein L, 1##BC113867|APOL1|8542|apolipoprotein L, 1##BC114475|APOL1|8542|apolipoprotein L, 1##BC127186|APOL1|8542|apolipoprotein L, 1##BC143038|APOL1|8542|apolipoprotein L, 1##BC143039|APOL1|8542|apolipoprotein L, 1##BC017331|APOL1|8542|apolipoprotein L, 1##AK296099|APOL1|8542|apolipoprotein L, 1##AB290175|MYH9|4627|myosin, heavy chain 9, non-muscle##CR456526|MYH9|4627|myosin, heavy chain 9, non-muscle##M81105|MYH9|4627|myosin, heavy chain 9, non-muscle##AK131080|MYH9|4627|myosin, heavy chain 9, non-muscle##BC049849|MYH9|4627|myosin, heavy chain 9, non-muscle	0.013384	
chr5	55966009	55966158	reg1027165.p2	4.057	+	AK123389 NM_024669	-436898	-	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-675320	-	NM_001242636 NM_001242639	-816934	+	NM_005921	144816	+	TSC_hg19_v1_chr5_+_56111375 AK307828	145281	+	TSC_hg19_v1_chr5_+_56111395 AF042838	145335	+	AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr7	101931672	101931808	reg1039926.p1	4.057	+	TSC_hg19_v1_chr7_+_101928431 AB000520	-3297	+	TSC_hg19_v1_chr7_+_101928390 NM_020979	-3343	+	M74099 NM_181552	-470859	+	NM_001146210	65148	-	TSC_hg19_v1_chr7_+_102004329 NM_001242713 BC063572 AK098276	72571	+	TSC_hg19_v1_chr7_+_102004338 BC048257 BC066362	72612	+	AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_020979|SH2B2|10603|SH2B adaptor protein 2##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)##NM_001242713|LOC100289561|100289561|uncharacterized LOC100289561##BC063572|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough##AK098276|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough	0.014858	
chr7	102354247	102354374	reg1033100.p2	4.057	+	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	-42190	-	AK302217 NM_001031618 NM_001166339	-63539	+	EU341824 NM_001114403 AK296589	-71034	-	TSC_hg19_v1_chr7_+_102389473 NM_001145268 NM_001145269 BC029175 AK297455 AK298753 AK054745 DQ893359 DQ896678	35180	+	NM_001031692 NM_005824 TSC_hg19_v1_chr7_+_102553446 AK226021 AK225701 U32907 AK290305 BC027903 AY358889	199122	+	AK097537 NM_145032	360704	-	BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##EU341824|UPK3BL|100134938|uroplakin 3B-like##NM_001114403|UPK3BL|100134938|uroplakin 3B-like##NM_001145268|FAM185A|222234|family with sequence similarity 185, member A##NM_001145269|FAM185A|222234|family with sequence similarity 185, member A##BC029175|FAM185A|222234|family with sequence similarity 185, member A##AK297455|FAM185A|222234|family with sequence similarity 185, member A##AK298753|FAM185A|222234|family with sequence similarity 185, member A##AK054745|FAM185A|222234|family with sequence similarity 185, member A##DQ893359|FAM185A|222234|family with sequence similarity 185, member A##DQ896678|FAM185A|222234|family with sequence similarity 185, member A##NM_001031692|LRRC17|10234|leucine rich repeat containing 17##NM_005824|LRRC17|10234|leucine rich repeat containing 17##AK226021|LRRC17|10234|leucine rich repeat containing 17##AK225701|LRRC17|10234|leucine rich repeat containing 17##U32907|LRRC17|10234|leucine rich repeat containing 17##AK290305|LRRC17|10234|leucine rich repeat containing 17##BC027903|LRRC17|10234|leucine rich repeat containing 17##AY358889|LRRC17|10234|leucine rich repeat containing 17##AK097537|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_145032|FBXL13|222235|F-box and leucine-rich repeat protein 13	0.0	
chr10	78797340	78797421	reg1031223.p2	4.056	+	AF267860 NM_032024	-1254862	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1635815	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1635899	-	AF118141 TSC_hg19_v1_chr10_-_79397246	599845	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	599956	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	600026	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.0	
chr14	67076894	67077026	reg1027269.p2	4.056	+	AJ272343 TSC_hg19_v1_chr14_+_66975224 AK294532 AK297447 BC030016 DQ892463 DQ895675 AB385462 AJ272033	-101735	+	TSC_hg19_v1_chr14_+_66974870 AK315569	-102091	+	TSC_hg19_v1_chr14_+_66974859 AK025169	-102107	+	NM_173526 AK093449 AX748134 AK302154 BC037380 BC050401	579183	+	BC095485 TSC_hg19_v1_chr14_+_67708117 NM_022474 AK291240 AK098373 BC053366 AL832326 BC129933 AL832578 BC037966 AK057160	631203	+	CU692980 TSC_hg19_v1_chr14_-_67826522 BC001411 AF104629 BC031002 AK315784 AK001155 AF145316 AF077614 AF100741 BC025373 NM_015994	749606	-	AJ272343|GPHN|10243|gephyrin##AK294532|GPHN|10243|gephyrin##AK297447|GPHN|10243|gephyrin##BC030016|GPHN|10243|gephyrin##DQ892463|GPHN|10243|gephyrin##DQ895675|GPHN|10243|gephyrin##AJ272033|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##NM_173526|FAM71D|161142|family with sequence similarity 71, member D##AK093449|FAM71D|161142|family with sequence similarity 71, member D##AK302154|FAM71D|161142|family with sequence similarity 71, member D##BC037380|FAM71D|161142|family with sequence similarity 71, member D##BC050401|FAM71D|161142|family with sequence similarity 71, member D##BC095485|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##NM_022474|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK291240|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK098373|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC053366|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832326|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC129933|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832578|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC037966|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	0.730401	CTCF.p2:-3:0.730
chr17	73521176	73521357	reg1020038.p2	4.056	+	TSC_hg19_v1_chr17_+_73512608 NM_207346 AK094466 BC045551 BC053643 BC047793 CU690512	-8652	+	BC066643 NM_020753 TSC_hg19_v1_chr17_-_73511632	-9627	-	TSC_hg19_v1_chr17_-_73511556 AF451976 BC032359	-9731	-	TSC_hg19_v1_chr17_+_73521798 NM_001015002 NM_001031803 NM_004524 BC010879 BC006503 X87342 BC067840 BC064994 BC080595	530	+	TSC_hg19_v1_chr17_+_73553885 AK126687	32619	+	AF418286 AF418287 AF418288 AF418289 AF418290 AF418291 TSC_hg19_v1_chr17_+_73584199	62909	+	NM_207346|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##AK094466|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC045551|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC053643|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC047793|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC066643|CASKIN2|57513|CASK interacting protein 2##NM_020753|CASKIN2|57513|CASK interacting protein 2##AF451976|CASKIN2|57513|CASK interacting protein 2##BC032359|CASKIN2|57513|CASK interacting protein 2##NM_001015002|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_001031803|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_004524|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC010879|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC006503|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##X87342|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC067840|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC064994|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##AK126687|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##AF418286|MYO15B|80022|myosin XVB pseudogene##AF418287|MYO15B|80022|myosin XVB pseudogene##AF418288|MYO15B|80022|myosin XVB pseudogene##AF418289|MYO15B|80022|myosin XVB pseudogene##AF418290|MYO15B|80022|myosin XVB pseudogene##AF418291|MYO15B|80022|myosin XVB pseudogene	0.0	
chr2	67464541	67464663	reg1034988.p1	4.056	+	TSC_hg19_v1_chr2_+_66666452 AK297109	-798152	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	-801762	+	AL832770 BC043503 NM_002398	-802079	+	TSC_hg19_v1_chr2_+_67624467 NM_019002 AJ242682 BC033075 BC040001	159880	+	BC016284 TSC_hg19_v1_chr2_-_68290140 X95592 BC009584 BC009589 BC005235 AK290451	825532	-	NM_001190263 NM_001190265 NM_006333 NM_173177 TSC_hg19_v1_chr2_-_68290160	825558	-	AK297109|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##AL832770|MEIS1|4211|Meis homeobox 1##BC043503|MEIS1|4211|Meis homeobox 1##NM_002398|MEIS1|4211|Meis homeobox 1##NM_019002|ETAA1|54465|Ewing tumor-associated antigen 1##AJ242682|ETAA1|54465|Ewing tumor-associated antigen 1##BC033075|ETAA1|54465|Ewing tumor-associated antigen 1##BC040001|ETAA1|54465|Ewing tumor-associated antigen 1##BC016284|C1D|10438|C1D nuclear receptor corepressor##X95592|C1D|10438|C1D nuclear receptor corepressor##BC009584|C1D|10438|C1D nuclear receptor corepressor##BC009589|C1D|10438|C1D nuclear receptor corepressor##BC005235|C1D|10438|C1D nuclear receptor corepressor##AK290451|C1D|10438|C1D nuclear receptor corepressor##NM_001190263|C1D|10438|C1D nuclear receptor corepressor##NM_001190265|C1D|10438|C1D nuclear receptor corepressor##NM_006333|C1D|10438|C1D nuclear receptor corepressor##NM_173177|C1D|10438|C1D nuclear receptor corepressor	0.78843	CTCF.p2:15:0.603
chr3	72928265	72928348	reg1034454.p1	4.056	+	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	-30714	-	BC017274 TSC_hg19_v1_chr3_-_72897575	-30731	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	-30758	-	TSC_hg19_v1_chr3_+_72937356 NM_001080393	8970	+	TSC_hg19_v1_chr3_+_73045961 AK289901 BC100281	117651	+	TSC_hg19_v1_chr3_+_73045984 BC110889	117685	+	BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_001080393|GXYLT2|727936|glucoside xylosyltransferase 2##AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	0.0	
chr4	10098059	10098240	reg1030498.p2	4.056	+	AK310895 BC018897 NM_001001290 AK096819	-56227	-	TSC_hg19_v1_chr4_-_10023140 AF210317 NM_020041 BC110414	-75025	-	NM_000798	-314892	+	TSC_hg19_v1_chr4_-_10118286 AB385044 CU674086 CU677992	20138	-	TSC_hg19_v1_chr4_-_10118356 AB209746 BC030541	20177	-	TSC_hg19_v1_chr4_-_10118358 BC002489 BC000201	20215	-	AK310895|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC018897|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_001001290|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AK096819|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##AF210317|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_020041|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##BC110414|SLC2A9|56606|solute carrier family 2 (facilitated glucose transporter), member 9##NM_000798|DRD5|1816|dopamine receptor D5##AB209746|WDR1|9948|WD repeat domain 1##BC030541|WDR1|9948|WD repeat domain 1##BC002489|WDR1|9948|WD repeat domain 1##BC000201|WDR1|9948|WD repeat domain 1	0.074833	
chr4	112768996	112769103	reg1037358.p1	4.056	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1205771	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1210880	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	-1224774	-	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	297565	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	384035	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	437952	-	NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain	0.641866	CTCF.p2:18:0.642
chr4	70022772	70022873	reg1032201.p1	4.056	+	AK313190 TSC_hg19_v1_chr4_+_69962191 BC030974 NM_001074 BC107727 AK223142 J05428 DQ893657 DQ895814	-60608	+	NM_001075 NM_001144767	-136710	-	HQ258456 BC130533 AY358727 AY542891 NM_024743	-205329	-	AF016492 BC069441 BC107059 BC107060 NM_001073 AK222839 AK222872 AK292738 AK298432 BC113649	57635	-	AF177272 AF177273 AF177274 NM_001207004 NM_053039 AB451456	123395	+	AY529122 DQ895203 AF064200 AF081793 AJ005162 Y00317 BC026264 TSC_hg19_v1_chr4_-_70361624 AK292748 NM_021139	338780	-	AK313190|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##BC030974|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##NM_001074|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##AK223142|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##J05428|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##DQ893657|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##DQ895814|UGT2B7|7364|UDP glucuronosyltransferase 2 family, polypeptide B7##NM_001075|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##NM_001144767|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##HQ258456|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##BC130533|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##AY358727|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##AY542891|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##NM_024743|UGT2A3|79799|UDP glucuronosyltransferase 2 family, polypeptide A3##AF016492|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC069441|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC107059|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##BC107060|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##NM_001073|UGT2B11|10720|UDP glucuronosyltransferase 2 family, polypeptide B11##AK222839|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK222872|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK292738|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AK298432|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##BC113649|UGT2B10|7365|UDP glucuronosyltransferase 2 family, polypeptide B10##AF177272|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF177273|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AF177274|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##NM_001207004|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##NM_053039|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AB451456|UGT2B28|54490|UDP glucuronosyltransferase 2 family, polypeptide B28##AY529122|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##DQ895203|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF064200|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AF081793|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AJ005162|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##Y00317|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##BC026264|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##AK292748|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4##NM_021139|UGT2B4|7363|UDP glucuronosyltransferase 2 family, polypeptide B4	0.0	
chr6	149568030	149568157	reg1037580.p1	4.056	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-499884	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-903902	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-904103	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	71010	+	AK315038 NM_015093 AK307650	71348	+	AY340238 NM_001002255 BC130305 HQ258040	153415	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr11	109855689	109855869	reg1032332.p2	4.055	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-562880	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-562936	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-1319965	+	AK095101 TSC_hg19_v1_chr11_+_109963524	107749	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	108351	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	311534	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.0	
chr12	125341179	125341279	reg1032463.p2	4.055	+	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	-289154	-	TSC_hg19_v1_chr12_-_125002875 BC033087	-338370	-	AK126577 NM_181709	-567520	+	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	7076	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	7148	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	7244	-	AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1	0.252958	CTCF.p2:39:0.253
chr12	17742078	17742177	reg1036562.p1	4.055	+	AF258348 BC017777 AB044746 AK095595 AK308826 NM_001001395 NM_001243609	-981086	-	AK308594 AK294909 NM_001243613	-982116	-	BC050085 NM_001243610	-982394	-	AK026308 BC042888 NM_024730	500955	-	NM_004570	672346	+	AF532185 NM_033123 AK314516 AY035866 AK292279	1148826	-	AF258348|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC017777|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AB044746|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK095595|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308826|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001001395|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243609|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK308594|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK294909|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243613|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##BC050085|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##NM_001243610|LMO3|55885|LIM domain only 3 (rhombotin-like 2)##AK026308|RERGL|79785|RERG/RAS-like##BC042888|RERGL|79785|RERG/RAS-like##NM_024730|RERGL|79785|RERG/RAS-like##NM_004570|PIK3C2G|5288|phosphoinositide-3-kinase, class 2, gamma polypeptide##AF532185|PLCZ1|89869|phospholipase C, zeta 1##NM_033123|PLCZ1|89869|phospholipase C, zeta 1##AK314516|PLCZ1|89869|phospholipase C, zeta 1##AY035866|PLCZ1|89869|phospholipase C, zeta 1##AK292279|PLCZ1|89869|phospholipase C, zeta 1	0.17937	
chr1	235062371	235062460	reg1027179.p1	4.055	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-166641	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-317169	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-318557	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	229674	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	229816	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	262148	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.03469	
chr12	82191035	82191148	reg1031253.p1	4.055	+	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	-37982	-	BC104912 BC143485 NM_001220475 NM_001220476 AK126971 TSC_hg19_v1_chr12_-_82152435 AB210009 NM_001220473 NM_001220474	-38720	-	AK294505 AK297372 AK299853 NM_001220477 NM_001220478	-199037	-	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	561085	-	NM_032230 TSC_hg19_v1_chr12_+_82752307 AK310231 AK026442 BC029120 CU688600	561218	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	889609	+	AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC104912|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC143485|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220475|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220476|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK126971|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AB210009|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220473|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220474|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59##NM_032230|C12orf26|84190|chromosome 12 open reading frame 26##AK310231|C12orf26|84190|chromosome 12 open reading frame 26##AK026442|C12orf26|84190|chromosome 12 open reading frame 26##BC029120|C12orf26|84190|chromosome 12 open reading frame 26##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2	0.233087	CTCF.p2:-31:0.233
chr14	50335179	50335350	reg1035139.p2	4.055	+	TSC_hg19_v1_chr14_-_50329567 X02067	-5668	-	TSC_hg19_v1_chr14_-_50319530 AK295010 AK293236 BC006001 BC056687 NM_004713	-15731	-	TSC_hg19_v1_chr14_-_50319497 AK304695 AK308537	-15768	-	TSC_hg19_v1_chr14_+_50359731 NM_001663	24466	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	24554	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	24569	+	X02067|RN7SL2|378706|RNA, 7SL, cytoplasmic 2##AK295010|NEMF|9147|nuclear export mediator factor##AK293236|NEMF|9147|nuclear export mediator factor##BC006001|NEMF|9147|nuclear export mediator factor##BC056687|NEMF|9147|nuclear export mediator factor##NM_004713|NEMF|9147|nuclear export mediator factor##AK304695|NEMF|9147|nuclear export mediator factor##AK308537|NEMF|9147|nuclear export mediator factor##NM_001663|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6	0.0	
chr15	70558063	70558163	reg1028940.p1	4.055	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-167870	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-167886	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-216204	-	TSC_hg19_v1_chr15_-_70878946 BC040579	320831	-	BC016881 AL834243 NM_001008224 AK055435	436514	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	497729	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	1.253933	CTCF.p2:-5:0.892	CTCF.p2:16:0.334
chr17	79702834	79702977	reg1036163.p1	4.055	+	TSC_hg19_v1_chr17_+_79679402 AJ131613 DQ893263 DQ896592 CU675633	-23478	+	BC007355 NM_012140 TSC_hg19_v1_chr17_+_79679381 AK075249	-23524	+	TSC_hg19_v1_chr17_+_79679341 BC015797	-23581	+	AK307234 NM_000160 AK314247 L20316	59111	+	TSC_hg19_v1_chr17_-_79791143 BC017108 BC063557 BC019318 BC094876	88182	-	AK000852 TSC_hg19_v1_chr17_-_79791171 BX649156 NM_001093767 NM_207368	88256	-	AJ131613|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##DQ893263|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##DQ896592|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##BC007355|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##NM_012140|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##AK075249|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##BC015797|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##AK307234|GCGR|2642|glucagon receptor##NM_000160|GCGR|2642|glucagon receptor##AK314247|GCGR|2642|glucagon receptor##L20316|GCGR|2642|glucagon receptor##BC017108|FAM195B|348262|family with sequence similarity 195, member B##BC063557|FAM195B|348262|family with sequence similarity 195, member B##BC019318|FAM195B|348262|family with sequence similarity 195, member B##BC094876|FAM195B|348262|family with sequence similarity 195, member B##AK000852|FAM195B|348262|family with sequence similarity 195, member B##BX649156|FAM195B|348262|family with sequence similarity 195, member B##NM_001093767|FAM195B|348262|family with sequence similarity 195, member B##NM_207368|FAM195B|348262|family with sequence similarity 195, member B	0.0	
chr20	35823898	35824079	reg1009092.p1	4.055	+	AB527120 AM392522 AM392819 TSC_hg19_v1_chr20_-_35807952 BC030006 BC057767 NM_152503 NM_213631 NM_213632 AK093432 AX748122	-16051	-	TSC_hg19_v1_chr20_+_35807749 AK308683 CR456899 DQ892347 DQ895552	-16235	+	TSC_hg19_v1_chr20_+_35807732 AK315801 BC003560	-16273	+	X00094 BC098109 BC098161 BC099727 NM_001184731 NM_021081	61299	-	TSC_hg19_v1_chr20_+_35918057 AK292971 NM_001003897 NM_022077	94047	+	TSC_hg19_v1_chr20_+_35918065 BC016822 BC014672	94097	+	AM392522|C20orf132|140699|chromosome 20 open reading frame 132##AM392819|C20orf132|140699|chromosome 20 open reading frame 132##BC030006|C20orf132|140699|chromosome 20 open reading frame 132##BC057767|C20orf132|140699|chromosome 20 open reading frame 132##NM_152503|C20orf132|140699|chromosome 20 open reading frame 132##NM_213631|C20orf132|140699|chromosome 20 open reading frame 132##NM_213632|C20orf132|140699|chromosome 20 open reading frame 132##AK093432|C20orf132|140699|chromosome 20 open reading frame 132##AK308683|RPN2|6185|ribophorin II##CR456899|RPN2|6185|ribophorin II##DQ892347|RPN2|6185|ribophorin II##DQ895552|RPN2|6185|ribophorin II##AK315801|RPN2|6185|ribophorin II##BC003560|RPN2|6185|ribophorin II##X00094|GHRH|2691|growth hormone releasing hormone##BC098109|GHRH|2691|growth hormone releasing hormone##BC098161|GHRH|2691|growth hormone releasing hormone##BC099727|GHRH|2691|growth hormone releasing hormone##NM_001184731|GHRH|2691|growth hormone releasing hormone##NM_021081|GHRH|2691|growth hormone releasing hormone##AK292971|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_001003897|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_022077|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC016822|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC014672|MANBAL|63905|mannosidase, beta A, lysosomal-like	0.0	
chr3	15598030	15598210	reg1035895.p1	4.055	+	BC126363 BC144004 BC074828 BC074829 TSC_hg19_v1_chr3_-_15563197 AY150334 AY150335 AY150336 AY150337 AY150338 AY150339 AJ225895 AF057036 NM_005677 NM_080539 AK289688	-34902	-	AK128401 NM_080538	-57742	-	TSC_hg19_v1_chr3_+_15469073 NM_033083 AK312330 AK304697 BC041329 AF272973 CU691982	-128952	+	DQ895558 EU176367 AF161397 TSC_hg19_v1_chr3_-_15643040	44884	-	BC007440 TSC_hg19_v1_chr3_-_15643077 AJ131753 AK056977 AK299287 AK301546 AK302086 BC001627 AK301990 NM_012260	44976	-	AK297033 TSC_hg19_v1_chr3_+_15643251 NM_000060 AK313252 AK294301 U03274 BC012099 CU680214	45128	+	BC126363|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC144004|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC074828|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC074829|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150334|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150335|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150336|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150337|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150338|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150339|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AJ225895|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AF057036|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_005677|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080539|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AK289688|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_033083|EAF1|85403|ELL associated factor 1##AK312330|EAF1|85403|ELL associated factor 1##AK304697|EAF1|85403|ELL associated factor 1##BC041329|EAF1|85403|ELL associated factor 1##AF272973|EAF1|85403|ELL associated factor 1##DQ895558|HACL1|26061|2-hydroxyacyl-CoA lyase 1##EU176367|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AF161397|HACL1|26061|2-hydroxyacyl-CoA lyase 1##BC007440|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AJ131753|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK056977|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK301546|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK302086|HACL1|26061|2-hydroxyacyl-CoA lyase 1##BC001627|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK301990|HACL1|26061|2-hydroxyacyl-CoA lyase 1##NM_012260|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK297033|BTD|686|biotinidase##NM_000060|BTD|686|biotinidase##AK313252|BTD|686|biotinidase##AK294301|BTD|686|biotinidase##U03274|BTD|686|biotinidase##BC012099|BTD|686|biotinidase	0.0	
chr5	86366084	86366265	reg1008394.p2	4.055	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	-452357	+	TSC_hg19_v1_chr5_+_85913757 AK026505	-452416	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-2685510	-	TSC_hg19_v1_chr5_+_86563706 CR749722	197511	+	TSC_hg19_v1_chr5_+_86563831 BC131816	197652	+	TSC_hg19_v1_chr5_+_86564085 AB209106 NM_002890 BC033015	197892	+	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.0	
chr8	21376322	21376432	reg1033009.p1	4.055	+	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	-1263631	-	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	-1321455	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	-1321484	+	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	269415	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	269989	-	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	394788	-	AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa	0.058378	
chr11	57154861	57154949	reg1032513.p1	4.054	+	AY358930 BC069126 AF132209 NM_006093	-6293	-	TSC_hg19_v1_chr11_+_57105826 NM_002559 BC069162 BC109287 BC074792 BC074793 AB016608	-48984	+	AB209132 BC091486 TSC_hg19_v1_chr11_-_57103354 M86737 NM_003146	-51556	-	M35670 X14088 AK312195 BC005929 M36805 Y00809 NM_001243245 NM_002728 X65787	3211	-	TSC_hg19_v1_chr11_-_57194537 AK311394 NM_014096	39626	-	TSC_hg19_v1_chr11_-_57194560 BC003163	39664	-	AY358930|PRG3|10394|proteoglycan 3##BC069126|PRG3|10394|proteoglycan 3##AF132209|PRG3|10394|proteoglycan 3##NM_006093|PRG3|10394|proteoglycan 3##NM_002559|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC069162|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC109287|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC074792|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##BC074793|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##AB016608|P2RX3|5024|purinergic receptor P2X, ligand-gated ion channel, 3##AB209132|SSRP1|6749|structure specific recognition protein 1##BC091486|SSRP1|6749|structure specific recognition protein 1##M86737|SSRP1|6749|structure specific recognition protein 1##NM_003146|SSRP1|6749|structure specific recognition protein 1##M35670|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##X14088|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##AK312195|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##BC005929|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##M36805|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##Y00809|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##NM_001243245|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##NM_002728|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##X65787|PRG2|5553|proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)##AK311394|SLC43A3|29015|solute carrier family 43, member 3##NM_014096|SLC43A3|29015|solute carrier family 43, member 3##BC003163|SLC43A3|29015|solute carrier family 43, member 3	0.796998	CTCF.p2:9:0.797
chr13	72051994	72052141	reg1027071.p2	4.054	+	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	-1369526	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-4247563	-	AK289924 NM_022843	-10062413	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	388192	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	388696	-	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	389367	-	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)	0.992685	CTCF.p2:4:0.993
chr14	54887348	54887481	reg1033150.p2	4.054	+	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	-23693	+	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	-463881	-	NM_130851	-466145	-	TSC_hg19_v1_chr14_-_54908095 BX248284 AY358635 AK074781 AK307074 AK311897 AF070654 AF104398 NM_005776 BC103741	20702	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	68271	-	TSC_hg19_v1_chr14_-_54955728 AB001106 BX647679 NM_004124	68341	-	AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##NM_130851|BMP4|652|bone morphogenetic protein 4##BX248284|CNIH|10175|cornichon homolog (Drosophila)##AY358635|CNIH|10175|cornichon homolog (Drosophila)##AK074781|CNIH|10175|cornichon homolog (Drosophila)##AK307074|CNIH|10175|cornichon homolog (Drosophila)##AK311897|CNIH|10175|cornichon homolog (Drosophila)##AF070654|CNIH|10175|cornichon homolog (Drosophila)##AF104398|CNIH|10175|cornichon homolog (Drosophila)##NM_005776|CNIH|10175|cornichon homolog (Drosophila)##BC103741|CNIH|10175|cornichon homolog (Drosophila)##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta##AB001106|GMFB|2764|glia maturation factor, beta##BX647679|GMFB|2764|glia maturation factor, beta##NM_004124|GMFB|2764|glia maturation factor, beta	0.014468	
chr15	75135075	75135181	reg1014561.p1	4.054	+	AK024055 NM_001030005 AB072900 BC018026 AY286501	-16138	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	-29956	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	-60272	+	TSC_hg19_v1_chr15_-_75135477 AB528889 CU691158 AK075047 BC056423 AK299380	325	-	BC048289 TSC_hg19_v1_chr15_-_75135479	351	-	TSC_hg19_v1_chr15_-_75135498 AK293181 BC036117	372	-	AK024055|CPLX3|594855|complexin 3##NM_001030005|CPLX3|594855|complexin 3##AB072900|CPLX3|594855|complexin 3##BC018026|CPLX3|594855|complexin 3##AY286501|CPLX3|594855|complexin 3##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like##X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##AK075047|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC056423|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK299380|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC048289|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK293181|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC036117|ULK3|25989|unc-51-like kinase 3 (C. elegans)	0.0	
chr17	77778370	77778550	reg1032932.p2	4.054	+	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-7553	-	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	-26479	+	AY230663 BC041453 NM_178543 AY358622	-73571	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	34682	-	BC044939 TSC_hg19_v1_chr17_+_77893233	114739	+	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	231142	-	EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16	0.0	
chr19	12405559	12405740	reg1029145.p1	4.054	+	TSC_hg19_v1_chr19_+_12305871 AK093188 AX721123	-99743	+	AK023304 TSC_hg19_v1_chr19_+_12305836	-99816	+	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	-131740	+	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	3	-	AK313755 BC022523 AK092116 AX747362 NM_145276	38835	-	AK024418 AK295923 NM_030824	70811	-	AK023304|LOC100289333|100289333|uncharacterized LOC100289333##NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136##BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44##AK313755|ZNF563|147837|zinc finger protein 563##BC022523|ZNF563|147837|zinc finger protein 563##AK092116|ZNF563|147837|zinc finger protein 563##NM_145276|ZNF563|147837|zinc finger protein 563##AK024418|ZNF442|79973|zinc finger protein 442##AK295923|ZNF442|79973|zinc finger protein 442##NM_030824|ZNF442|79973|zinc finger protein 442	0.0	
chr21	25226250	25226354	reg1032809.p1	4.054	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-2855529	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-2855612	+	TSC_hg19_v1_chr21_+_22370656 BC052946 NM_004540	-2855660	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	574766	+	TSC_hg19_v1_chr21_+_26934442 AF402776	1708170	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	1753513	-	BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##BC052946|NCAM2|4685|neural cell adhesion molecule 2##NM_004540|NCAM2|4685|neural cell adhesion molecule 2##AK124194|FLJ42200|400860|FLJ42200 protein##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39	0.94703	CTCF.p2:3:0.947
chr21	30605762	30605829	reg1033514.p1	4.054	+	TSC_hg19_v1_chr21_+_30517918 AK309998 EF219160	-87885	+	AY171599 NM_020152	-152923	+	AK308063 TSC_hg19_v1_chr21_-_30445995 AK298801 BC072001 BC005220 NM_006585	-159806	-	TSC_hg19_v1_chr21_+_30671158 AK291021 AB002803	65369	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	65425	+	TSC_hg19_v1_chr21_+_30671242 AK313791 BC063307	65446	+	AK309998|C21orf7|56911|chromosome 21 open reading frame 7##EF219160|C21orf7|56911|chromosome 21 open reading frame 7##AY171599|C21orf7|56911|chromosome 21 open reading frame 7##NM_020152|C21orf7|56911|chromosome 21 open reading frame 7##AK308063|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK298801|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC072001|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC005220|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##NM_006585|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK291021|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AB002803|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AK313791|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC063307|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	0.0	
chr21	44745899	44746044	reg1039264.p1	4.054	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-156797	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-218287	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-218346	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	100018	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	101024	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	333391	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr21	48028683	48028804	reg1026355.p1	4.054	+	BC001766 TSC_hg19_v1_chr21_-_48024996 BC041935 CS301701 CS301702 NM_006272	-3734	-	AK056738 TSC_hg19_v1_chr21_+_47878972 AB273729	-149747	+	TSC_hg19_v1_chr21_+_47878854 AK303351 NM_001146114 NM_001146115 NM_001146116 NM_015151 NM_206889 NM_206890 NM_206891 BC038443 BC033718 AF490768	-149881	+	TSC_hg19_v1_chr21_+_48055078 AK123650	26334	+	NM_001242864 NM_001242865 NM_001242866 NM_001535 NM_206962 TSC_hg19_v1_chr21_+_48055572 AK123352 AY786414 FJ436410 FJ436411 FJ436412 U79286 X99209 U80213 AK312573 AL833586	26800	+	AK223157 TSC_hg19_v1_chr21_+_48055585 BC000727	26843	+	BC001766|S100B|6285|S100 calcium binding protein B##BC041935|S100B|6285|S100 calcium binding protein B##NM_006272|S100B|6285|S100 calcium binding protein B##AK056738|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AB273729|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AK303351|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146114|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146115|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146116|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_015151|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206889|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206890|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206891|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##BC038443|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##BC033718|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AF490768|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AK123650|PRMT2|3275|protein arginine methyltransferase 2##NM_001242864|PRMT2|3275|protein arginine methyltransferase 2##NM_001242865|PRMT2|3275|protein arginine methyltransferase 2##NM_001242866|PRMT2|3275|protein arginine methyltransferase 2##NM_001535|PRMT2|3275|protein arginine methyltransferase 2##NM_206962|PRMT2|3275|protein arginine methyltransferase 2##AK123352|PRMT2|3275|protein arginine methyltransferase 2##AY786414|PRMT2|3275|protein arginine methyltransferase 2##FJ436410|PRMT2|3275|protein arginine methyltransferase 2##FJ436411|PRMT2|3275|protein arginine methyltransferase 2##FJ436412|PRMT2|3275|protein arginine methyltransferase 2##U79286|PRMT2|3275|protein arginine methyltransferase 2##X99209|PRMT2|3275|protein arginine methyltransferase 2##U80213|PRMT2|3275|protein arginine methyltransferase 2##AK312573|PRMT2|3275|protein arginine methyltransferase 2##AL833586|PRMT2|3275|protein arginine methyltransferase 2##AK223157|PRMT2|3275|protein arginine methyltransferase 2##BC000727|PRMT2|3275|protein arginine methyltransferase 2	0.0	
chr2	168821564	168821683	reg1033400.p1	4.054	+	NM_020981	-146442	+	EF119711 EF119717 NM_001199144 NM_001199145	-777831	+	EF119718 EF119719 EF119720 EF119721 EF119722 NM_001079810 NM_001199143 NM_152381 AK097519	-1076627	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	282450	-	TSC_hg19_v1_chr2_+_169312764 AK172775	491136	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	491252	+	NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##EF119718|XIRP2|129446|xin actin-binding repeat containing 2##EF119719|XIRP2|129446|xin actin-binding repeat containing 2##EF119720|XIRP2|129446|xin actin-binding repeat containing 2##EF119721|XIRP2|129446|xin actin-binding repeat containing 2##EF119722|XIRP2|129446|xin actin-binding repeat containing 2##NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199143|XIRP2|129446|xin actin-binding repeat containing 2##NM_152381|XIRP2|129446|xin actin-binding repeat containing 2##AK097519|XIRP2|129446|xin actin-binding repeat containing 2##BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##AK172775|CERS6|253782|ceramide synthase 6##NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6	0.997085	CTCF.p2:-26:0.997
chr7	132824262	132824386	reg1032083.p1	4.054	+	TSC_hg19_v1_chr7_-_132766851 BC011596 BC014839 AK129533	-57478	-	AB528286 TSC_hg19_v1_chr7_-_132766813 AK294071 AK000427 NM_017812 AK310236	-57560	-	BC028744 NM_181775	-490878	-	TSC_hg19_v1_chr7_+_132937838 NM_001037126 NM_021807 AF380839 AK027688 AL831989 AK298191 BC067263 BC026174 CU693148 AB051486	113525	+	BC104897 BC104899 AK057348 NM_144648	987753	+	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	1177299	-	BC011596|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC014839|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK129533|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK294071|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK000427|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##NM_017812|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##AK310236|CHCHD3|54927|coiled-coil-helix-coiled-coil-helix domain containing 3##BC028744|PLXNA4|91584|plexin A4##NM_181775|PLXNA4|91584|plexin A4##NM_001037126|EXOC4|60412|exocyst complex component 4##NM_021807|EXOC4|60412|exocyst complex component 4##AF380839|EXOC4|60412|exocyst complex component 4##AK027688|EXOC4|60412|exocyst complex component 4##AL831989|EXOC4|60412|exocyst complex component 4##AK298191|EXOC4|60412|exocyst complex component 4##BC067263|EXOC4|60412|exocyst complex component 4##BC026174|EXOC4|60412|exocyst complex component 4##AB051486|EXOC4|60412|exocyst complex component 4##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4	0.0	
chr9	36855608	36855686	reg1031754.p2	4.054	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-282723	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-454472	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-454750	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	178769	-	TSC_hg19_v1_chr9_+_37079908 AK091718	224259	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	224361	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.872803	CTCF.p2:-2:0.450	CTCF.p2:-58:0.392
chrX	9934915	9935038	reg1041181.p1	4.054	+	BC140866 TSC_hg19_v1_chrX_+_9754543	-180433	+	TSC_hg19_v1_chrX_+_9754468 NM_001649 X83543	-180496	+	Z48804 BC015657 BC068977 NM_000273	-201016	-	NM_001195081	421	+	BC098455 NM_015691	48817	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	190078	+	BC140866|SHROOM2|357|shroom family member 2##NM_001649|SHROOM2|357|shroom family member 2##X83543|SHROOM2|357|shroom family member 2##Z48804|GPR143|4935|G protein-coupled receptor 143##BC015657|GPR143|4935|G protein-coupled receptor 143##BC068977|GPR143|4935|G protein-coupled receptor 143##NM_000273|GPR143|4935|G protein-coupled receptor 143##NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4	0.016822	
chr10	112534102	112534260	reg1029981.p2	4.053	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-130052	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-190066	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-206689	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	97431	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	97533	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	144515	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.0	
chr17	74242658	74242797	reg1029027.p1	4.053	+	AK091467 AX747002 AB067504 NM_052916 TSC_hg19_v1_chr17_-_74236615	-6279	-	BC046460 NM_001454	-105353	-	TSC_hg19_v1_chr17_-_74099869 BX647763 NM_001013839 NM_001145297 NM_001145298 NM_001145299 NM_015219	-142862	-	TSC_hg19_v1_chr17_+_74261282 BC060859 NM_182565	18557	+	TSC_hg19_v1_chr17_+_74261431 BC035511 EU176314	18780	+	EU832276 EU832361 BC131559 AL136774 NM_032134	60943	-	AK091467|RNF157|114804|ring finger protein 157##AB067504|RNF157|114804|ring finger protein 157##NM_052916|RNF157|114804|ring finger protein 157##BC046460|FOXJ1|2302|forkhead box J1##NM_001454|FOXJ1|2302|forkhead box J1##BX647763|EXOC7|23265|exocyst complex component 7##NM_001013839|EXOC7|23265|exocyst complex component 7##NM_001145297|EXOC7|23265|exocyst complex component 7##NM_001145298|EXOC7|23265|exocyst complex component 7##NM_001145299|EXOC7|23265|exocyst complex component 7##NM_015219|EXOC7|23265|exocyst complex component 7##BC060859|FAM100B|283991|family with sequence similarity 100, member B##NM_182565|FAM100B|283991|family with sequence similarity 100, member B##BC035511|FAM100B|283991|family with sequence similarity 100, member B##EU176314|FAM100B|283991|family with sequence similarity 100, member B##EU832276|QRICH2|84074|glutamine rich 2##EU832361|QRICH2|84074|glutamine rich 2##BC131559|QRICH2|84074|glutamine rich 2##AL136774|QRICH2|84074|glutamine rich 2##NM_032134|QRICH2|84074|glutamine rich 2	0.0	
chr18	46166232	46166376	reg1037553.p1	4.053	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-100531	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-230595	-	AM988836 AK296709 NM_001039360 EF120357	-502605	-	AK131394 NM_001190823	302843	-	AK301535 NM_001190822	309398	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	310463	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.98874	CTCF.p2:-3:0.989
chr18	56223985	56224166	reg1027400.p1	4.053	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-335225	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-335272	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-335313	+	BX647796 NM_052947	72113	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	114566	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	114653	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.0	
chr3	58027620	58027800	reg1034305.p2	4.053	+	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	-33563	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-284508	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-348971	-	NM_004944	172687	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	195573	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	195820	+	AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6	0.0	
chr5	180594253	180594434	reg1017902.p1	4.053	+	NM_206880	-12401	+	AK298113 TSC_hg19_v1_chr5_+_180467271 BC062459	-127028	+	NM_152547 TSC_hg19_v1_chr5_+_180467233 AK057097 AY358358	-127106	+	AF396655 NM_203297	33586	-	AF396652 AF396653 NM_203294 NM_203295 NM_203296	36996	-	DQ892585 DQ895803 BC080553 BC011567 AK314872 AF396651 AX776005 BC132863 BC132867 NM_033342 NM_203293 TSC_hg19_v1_chr5_-_180632192 AF220032	37858	-	NM_206880|OR2V2|285659|olfactory receptor, family 2, subfamily V, member 2##AK298113|BTNL9|153579|butyrophilin-like 9##BC062459|BTNL9|153579|butyrophilin-like 9##NM_152547|BTNL9|153579|butyrophilin-like 9##AK057097|BTNL9|153579|butyrophilin-like 9##AY358358|BTNL9|153579|butyrophilin-like 9##AF396655|TRIM7|81786|tripartite motif containing 7##NM_203297|TRIM7|81786|tripartite motif containing 7##AF396652|TRIM7|81786|tripartite motif containing 7##AF396653|TRIM7|81786|tripartite motif containing 7##NM_203294|TRIM7|81786|tripartite motif containing 7##NM_203295|TRIM7|81786|tripartite motif containing 7##NM_203296|TRIM7|81786|tripartite motif containing 7##DQ892585|TRIM7|81786|tripartite motif containing 7##DQ895803|TRIM7|81786|tripartite motif containing 7##BC080553|TRIM7|81786|tripartite motif containing 7##BC011567|TRIM7|81786|tripartite motif containing 7##AK314872|TRIM7|81786|tripartite motif containing 7##AF396651|TRIM7|81786|tripartite motif containing 7##BC132863|TRIM7|81786|tripartite motif containing 7##BC132867|TRIM7|81786|tripartite motif containing 7##NM_033342|TRIM7|81786|tripartite motif containing 7##NM_203293|TRIM7|81786|tripartite motif containing 7##AF220032|TRIM7|81786|tripartite motif containing 7	0.0	
chr7	2234760	2234844	reg1034769.p2	4.053	+	TSC_hg19_v1_chr7_-_1980177 BC018870	-254639	-	NM_001128636	-486005	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-624981	+	AK310481 TSC_hg19_v1_chr7_-_2272542	37733	-	TSC_hg19_v1_chr7_-_2272559 AF083811	37758	-	TSC_hg19_v1_chr7_-_2272581 AK090959 AK310831 AK314227 AX746704 NM_001013836 NM_001013837 NM_003550	37778	-	BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AF083811|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK090959|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310831|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK314227|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013836|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013837|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_003550|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.567718	CTCF.p2:-7:0.568
chr8	20854968	20855149	reg1039310.p1	4.053	+	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	-742312	-	TSC_hg19_v1_chr8_+_20054905 X62949 BC003100 AK298819 AB208806 L35249 CU688958 DQ891837 DQ895023 BC007309	-800136	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	-800165	+	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	790734	-	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	791308	-	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	916107	-	AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##X62949|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC003100|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK298819|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AB208806|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##L35249|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ891837|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##DQ895023|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC007309|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa	0.51395	CTCF.p2:51:0.514
chr10	11147461	11147576	reg1033518.p2	4.052	+	U69546 TSC_hg19_v1_chr10_+_11060121	-87402	+	AF090694 TSC_hg19_v1_chr10_+_11060072	-87447	+	TSC_hg19_v1_chr10_+_11059882 AK314087 NM_006561 BC036391	-87628	+	AK299983 NM_001025076 NM_001083591 TSC_hg19_v1_chr10_+_11207008	59451	+	AK297313 TSC_hg19_v1_chr10_+_11207057 AK299992 AF036956 AK293164 AF432906	59578	+	TSC_hg19_v1_chr10_+_11207244 AK316354	59727	+	U69546|CELF2|10659|CUGBP, Elav-like family member 2##AF090694|CELF2|10659|CUGBP, Elav-like family member 2##AK314087|CELF2|10659|CUGBP, Elav-like family member 2##NM_006561|CELF2|10659|CUGBP, Elav-like family member 2##BC036391|CELF2|10659|CUGBP, Elav-like family member 2##AK299983|CELF2|10659|CUGBP, Elav-like family member 2##NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2##NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2##AK297313|CELF2|10659|CUGBP, Elav-like family member 2##AK299992|CELF2|10659|CUGBP, Elav-like family member 2##AF036956|CELF2|10659|CUGBP, Elav-like family member 2##AK293164|CELF2|10659|CUGBP, Elav-like family member 2##AF432906|CELF2|10659|CUGBP, Elav-like family member 2##AK316354|CELF2|10659|CUGBP, Elav-like family member 2	0.336472	CTCF.p2:27:0.336
chr11	65655867	65656004	reg1022513.p1	4.052	+	BC048255 NM_001335 BC035637 AF013611	-8631	+	TSC_hg19_v1_chr11_-_65640272 AY358899 AK075453 AK315181 AB030655 AF109121 AK000980 AK292079 BC010456 BC018871 NM_016938	-15634	-	BC109225 TSC_hg19_v1_chr11_-_65638766	-17216	-	TSC_hg19_v1_chr11_-_65655968 AF171944 AF171945 AF171946 AF250391 CR456749 EU176427 EU176765 AF010187 BC017448 AK293882 AK315976 AK223438 AK289562 AK296571 AK299159 AK309974 BC014388 NM_004214 NM_198897	3	-	NM_006848	1939	+	TSC_hg19_v1_chr11_+_65658143 BC008796 AK312109 U63825 AB464503 CU679113	2242	+	BC048255|CTSW|1521|cathepsin W##NM_001335|CTSW|1521|cathepsin W##BC035637|CTSW|1521|cathepsin W##AF013611|CTSW|1521|cathepsin W##AY358899|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AK075453|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AK315181|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AB030655|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AF109121|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AK000980|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AK292079|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##BC010456|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##BC018871|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##NM_016938|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##BC109225|EFEMP2|30008|EGF containing fibulin-like extracellular matrix protein 2##AF171944|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF171945|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF171946|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF250391|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##CR456749|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##EU176427|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##EU176765|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AF010187|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##BC017448|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK293882|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK315976|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK223438|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK289562|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK296571|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK299159|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##AK309974|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##BC014388|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##NM_004214|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##NM_198897|FIBP|9158|fibroblast growth factor (acidic) intracellular binding protein##NM_006848|CCDC85B|11007|coiled-coil domain containing 85B##BC008796|CCDC85B|11007|coiled-coil domain containing 85B##AK312109|CCDC85B|11007|coiled-coil domain containing 85B##U63825|CCDC85B|11007|coiled-coil domain containing 85B	0.093731	
chr1	45150243	45150390	reg1027972.p1	4.052	+	BC026115 NM_001145636	-9923	+	AK296548 TSC_hg19_v1_chr1_-_45140143 BC007521	-10168	-	CR457348 AK026006 AK225405 TSC_hg19_v1_chr1_-_45140099 BC064520 NM_024587 AL832539	-10229	-	TSC_hg19_v1_chr1_+_45205518 AB264115 NM_006845	55182	+	AK124208 AK300756 AK312606 TSC_hg19_v1_chr1_+_45205533 BC008764 U63743 BC014924	55226	+	TSC_hg19_v1_chr1_+_45205568 AK290688 AB590244 BT006759 CR450302 CU677119 CU679091 DQ893800 EU176178	55265	+	BC026115|C1orf228|339541|chromosome 1 open reading frame 228##NM_001145636|C1orf228|339541|chromosome 1 open reading frame 228##AK296548|TMEM53|79639|transmembrane protein 53##BC007521|TMEM53|79639|transmembrane protein 53##CR457348|TMEM53|79639|transmembrane protein 53##AK026006|TMEM53|79639|transmembrane protein 53##AK225405|TMEM53|79639|transmembrane protein 53##BC064520|TMEM53|79639|transmembrane protein 53##NM_024587|TMEM53|79639|transmembrane protein 53##AL832539|TMEM53|79639|transmembrane protein 53##AB264115|KIF2C|11004|kinesin family member 2C##NM_006845|KIF2C|11004|kinesin family member 2C##AK300756|KIF2C|11004|kinesin family member 2C##AK312606|KIF2C|11004|kinesin family member 2C##BC008764|KIF2C|11004|kinesin family member 2C##U63743|KIF2C|11004|kinesin family member 2C##BC014924|KIF2C|11004|kinesin family member 2C##AK290688|KIF2C|11004|kinesin family member 2C##BT006759|KIF2C|11004|kinesin family member 2C##CR450302|KIF2C|11004|kinesin family member 2C##DQ893800|KIF2C|11004|kinesin family member 2C##EU176178|KIF2C|11004|kinesin family member 2C	0.0	
chr19	2085472	2085624	reg1022292.p2	4.052	+	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	-305	-	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-34315	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-39307	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	10717	-	TSC_hg19_v1_chr19_-_2096297 AL832474	10746	-	TSC_hg19_v1_chr19_+_2096913 AY358444 NM_001031735 NM_001039846 DQ196309 DQ196310 AK301957 AY753639 BC014609 BC040964 BC010443	11312	+	AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A##AY358444|IZUMO4|113177|IZUMO family member 4##NM_001031735|IZUMO4|113177|IZUMO family member 4##NM_001039846|IZUMO4|113177|IZUMO family member 4##DQ196309|IZUMO4|113177|IZUMO family member 4##DQ196310|IZUMO4|113177|IZUMO family member 4##AK301957|IZUMO4|113177|IZUMO family member 4##AY753639|IZUMO4|113177|IZUMO family member 4##BC014609|IZUMO4|113177|IZUMO family member 4##BC040964|IZUMO4|113177|IZUMO family member 4##BC010443|IZUMO4|113177|IZUMO family member 4	0.0	
chr19	21439642	21439736	reg1034212.p1	4.052	+	BX647597 TSC_hg19_v1_chr19_+_21324836 AK308127 NM_133473 AK293072 AB075849 BC065374 BC040506	-114833	+	NM_182515 AL834415 TSC_hg19_v1_chr19_+_21264973 AK056006 BC022527 BC037782 BC050468 BC064985	-174686	+	AK290475 NM_001172671 NM_025189 TSC_hg19_v1_chr19_+_21203432 AK023721 AX721141 AY269787 BC111776	-236208	+	TSC_hg19_v1_chr19_-_21512183 AK128184 AK131527 NM_021269 AK095062 BX647526	72504	-	BC034499 TSC_hg19_v1_chr19_+_21541801 AK027579 AK291002 AK291193	102091	+	TSC_hg19_v1_chr19_+_21579931 NM_001076678 NM_145326 NM_175910 BX648842 AK092178 AK128494 AB209086 BC006408 BC022394 AX721142 EU446562	140272	+	BX647597|ZNF431|170959|zinc finger protein 431##AK308127|ZNF431|170959|zinc finger protein 431##NM_133473|ZNF431|170959|zinc finger protein 431##AK293072|ZNF431|170959|zinc finger protein 431##AB075849|ZNF431|170959|zinc finger protein 431##BC040506|ZNF431|170959|zinc finger protein 431##NM_182515|ZNF714|148206|zinc finger protein 714##AK056006|ZNF714|148206|zinc finger protein 714##BC022527|ZNF714|148206|zinc finger protein 714##BC037782|ZNF714|148206|zinc finger protein 714##BC050468|ZNF714|148206|zinc finger protein 714##BC064985|ZNF714|148206|zinc finger protein 714##AK290475|ZNF430|80264|zinc finger protein 430##NM_001172671|ZNF430|80264|zinc finger protein 430##NM_025189|ZNF430|80264|zinc finger protein 430##AK023721|ZNF430|80264|zinc finger protein 430##AY269787|ZNF430|80264|zinc finger protein 430##BC111776|ZNF430|80264|zinc finger protein 430##AK128184|ZNF708|7562|zinc finger protein 708##AK131527|ZNF708|7562|zinc finger protein 708##NM_021269|ZNF708|7562|zinc finger protein 708##BX647526|ZNF708|7562|zinc finger protein 708##BC034499|ZNF738|148203|zinc finger protein 738##AK027579|ZNF738|148203|zinc finger protein 738##AK291002|ZNF738|148203|zinc finger protein 738##AK291193|ZNF738|148203|zinc finger protein 738##NM_001076678|ZNF493|284443|zinc finger protein 493##NM_145326|ZNF493|284443|zinc finger protein 493##NM_175910|ZNF493|284443|zinc finger protein 493##BX648842|ZNF493|284443|zinc finger protein 493##AK092178|ZNF493|284443|zinc finger protein 493##AK128494|ZNF493|284443|zinc finger protein 493##AB209086|ZNF493|284443|zinc finger protein 493##BC006408|ZNF493|284443|zinc finger protein 493##BC022394|ZNF493|284443|zinc finger protein 493##EU446562|ZNF493|284443|zinc finger protein 493	1.12204	CTCF.p2:0:0.915	CTCF.p2:55:0.207
chr19	35837657	35837822	reg1032692.p1	4.052	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	-17648	+	NM_001199216 NM_002361 NM_080600 AK223562 BC093045 TSC_hg19_v1_chr19_+_35783063 BC034042 AK094545 AK222649 AK308976 M29273 AB209170 AK294644 AK222680 BC053347	-54697	+	AF309489 NM_021175 TSC_hg19_v1_chr19_+_35773430 AK096110 BC020612 AF131292 AY358669 AJ277280	-64314	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	4711	+	AK290710 NM_005304 BC035657	11755	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	102878	+	NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule##NM_001199216|MAG|4099|myelin associated glycoprotein##NM_002361|MAG|4099|myelin associated glycoprotein##NM_080600|MAG|4099|myelin associated glycoprotein##AK223562|MAG|4099|myelin associated glycoprotein##BC093045|MAG|4099|myelin associated glycoprotein##BC034042|MAG|4099|myelin associated glycoprotein##AK094545|MAG|4099|myelin associated glycoprotein##AK222649|MAG|4099|myelin associated glycoprotein##AK308976|MAG|4099|myelin associated glycoprotein##M29273|MAG|4099|myelin associated glycoprotein##AK294644|MAG|4099|myelin associated glycoprotein##AK222680|MAG|4099|myelin associated glycoprotein##BC053347|MAG|4099|myelin associated glycoprotein##AF309489|HAMP|57817|hepcidin antimicrobial peptide##NM_021175|HAMP|57817|hepcidin antimicrobial peptide##AK096110|HAMP|57817|hepcidin antimicrobial peptide##BC020612|HAMP|57817|hepcidin antimicrobial peptide##AF131292|HAMP|57817|hepcidin antimicrobial peptide##AY358669|HAMP|57817|hepcidin antimicrobial peptide##AJ277280|HAMP|57817|hepcidin antimicrobial peptide##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2	0.0	
chr2	109605690	109605758	reg1029969.p1	4.052	+	TSC_hg19_v1_chr2_-_109605623 AK296936	-105	-	TSC_hg19_v1_chr2_+_109403228 BC050579 AK125199 AK057307 NM_144978 BC015847 BC038421	-202522	+	TSC_hg19_v1_chr2_+_109384621 AY170822	-221041	+	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	23	-	NM_001099289 DQ307286	140339	+	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	765757	-	AK296936|EDAR|10913|ectodysplasin A receptor##BC050579|CCDC138|165055|coiled-coil domain containing 138##AK125199|CCDC138|165055|coiled-coil domain containing 138##AK057307|CCDC138|165055|coiled-coil domain containing 138##NM_144978|CCDC138|165055|coiled-coil domain containing 138##BC015847|CCDC138|165055|coiled-coil domain containing 138##BC038421|CCDC138|165055|coiled-coil domain containing 138##AY170822|RANBP2|5903|RAN binding protein 2##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10	0.465951	CTCF.p2:8:0.466
chr2	232797796	232797946	reg1033195.p2	4.052	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	-6838	-	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-146755	+	TSC_hg19_v1_chr2_+_232646442 AK307486	-151434	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	28489	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	445512	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	473705	+	BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK307486|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2	0.031774	
chr11	57259425	57259525	reg1008059.p2	4.051	+	TSC_hg19_v1_chr11_+_57228149 BC113673 BC117276 BC143818 AF532858 AX751514 AY250221 DQ864979 NM_178570	-31243	+	NM_017611	-64423	-	TSC_hg19_v1_chr11_-_57194592 AK075552 AK298028 AK315839 NM_199329	-64883	-	AF045584 TSC_hg19_v1_chr11_-_57282334 BC001639 NM_001198810	22861	-	TSC_hg19_v1_chr11_-_57283184 AB103033 NM_003627	23697	-	AK289751 BC032133 TSC_hg19_v1_chr11_-_57298210 AF150089 NM_012456	38730	-	BC113673|RTN4RL2|349667|reticulon 4 receptor-like 2##BC117276|RTN4RL2|349667|reticulon 4 receptor-like 2##BC143818|RTN4RL2|349667|reticulon 4 receptor-like 2##AF532858|RTN4RL2|349667|reticulon 4 receptor-like 2##AX751514|RTN4RL2|349667|reticulon 4 receptor-like 2##AY250221|RTN4RL2|349667|reticulon 4 receptor-like 2##DQ864979|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_178570|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_017611|SLC43A3|29015|solute carrier family 43, member 3##AK075552|SLC43A3|29015|solute carrier family 43, member 3##AK298028|SLC43A3|29015|solute carrier family 43, member 3##AK315839|SLC43A3|29015|solute carrier family 43, member 3##NM_199329|SLC43A3|29015|solute carrier family 43, member 3##AF045584|SLC43A1|8501|solute carrier family 43, member 1##BC001639|SLC43A1|8501|solute carrier family 43, member 1##NM_001198810|SLC43A1|8501|solute carrier family 43, member 1##AB103033|SLC43A1|8501|solute carrier family 43, member 1##NM_003627|SLC43A1|8501|solute carrier family 43, member 1##AK289751|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##BC032133|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##AF150089|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)##NM_012456|TIMM10|26519|translocase of inner mitochondrial membrane 10 homolog (yeast)	0.010075	
chr1	38993189	38993325	reg1031544.p2	4.051	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-480808	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-514827	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-514872	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	332129	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	345759	-	AK312811 BC051675 AK123051 NM_030772	354020	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.014717	
chr18	48712969	48713100	reg1029024.p2	4.051	+	TSC_hg19_v1_chr18_+_48556613 AK290770 BC002379	-156428	+	TSC_hg19_v1_chr18_+_48556582 NM_005359	-156500	+	TSC_hg19_v1_chr18_+_48494409 AK024822 AF308695 AK303027 AK310911 BC014624 AK223507 AB029151	-218613	+	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	10192	-	AY950679 TSC_hg19_v1_chr18_-_48723734	10678	-	TSC_hg19_v1_chr18_-_48724033 NM_016626	11006	-	AK290770|SMAD4|4089|SMAD family member 4##BC002379|SMAD4|4089|SMAD family member 4##NM_005359|SMAD4|4089|SMAD family member 4##AK024822|ELAC1|55520|elaC homolog 1 (E. coli)##AF308695|ELAC1|55520|elaC homolog 1 (E. coli)##AK310911|ELAC1|55520|elaC homolog 1 (E. coli)##BC014624|ELAC1|55520|elaC homolog 1 (E. coli)##AK223507|ELAC1|55520|elaC homolog 1 (E. coli)##AB029151|ELAC1|55520|elaC homolog 1 (E. coli)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)	0.0	
chr2	8833658	8833770	reg1012493.p2	4.051	+	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-11511	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1776127	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1815851	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	144005	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	310107	-	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	513178	+	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	0.032674	
chr6	111926861	111926986	reg1032029.p1	4.051	+	NM_001164282	-32026	-	NM_001164283	-38403	-	TSC_hg19_v1_chr6_+_111804739 BC043575 BX647114 BC031311	-122223	+	BC002823 AF085921 AF136405 TSC_hg19_v1_chr6_-_111927072 AK310922 AK025351 AK314415	144	-	TSC_hg19_v1_chr6_-_111927082 AL050289 AK310141 AF136406 AF136407	249	-	NM_001164281 NM_147686	550	-	NM_001164282|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_001164283|TRAF3IP2|10758|TRAF3 interacting protein 2##BC043575|TRAF3IP2-AS1|643749|TRAF3IP2 antisense RNA 1 (non-protein coding)##BX647114|TRAF3IP2-AS1|643749|TRAF3IP2 antisense RNA 1 (non-protein coding)##BC031311|TRAF3IP2-AS1|643749|TRAF3IP2 antisense RNA 1 (non-protein coding)##BC002823|TRAF3IP2|10758|TRAF3 interacting protein 2##AF085921|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136405|TRAF3IP2|10758|TRAF3 interacting protein 2##AK310922|TRAF3IP2|10758|TRAF3 interacting protein 2##AK025351|TRAF3IP2|10758|TRAF3 interacting protein 2##AK314415|TRAF3IP2|10758|TRAF3 interacting protein 2##AL050289|TRAF3IP2|10758|TRAF3 interacting protein 2##AK310141|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136406|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136407|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_001164281|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_147686|TRAF3IP2|10758|TRAF3 interacting protein 2	0.0	
chr6	11461285	11461405	reg1041491.p1	4.051	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-78805	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-228435	-	L43821 TSC_hg19_v1_chr6_-_11232900	-228445	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	77153	+	NM_001143948 NM_032744	317934	-	NM_002114	551378	+	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1	0.0	
chr6	41888711	41888874	reg1026288.p1	4.051	+	AK097385 EU446931 AB463862 BC040950 AK023092 AF097725 BC032552 TSC_hg19_v1_chr6_-_41888856 AK293412	-24	-	TSC_hg19_v1_chr6_-_41863114 BC014176 NM_018561	-25691	-	BC107435 AF216754 TSC_hg19_v1_chr6_+_41755425 BC018624 BC067252 BC022274 AB435319 L34839	-133359	+	TSC_hg19_v1_chr6_-_41888858 BC019866 AK300573 AK307070 BC012618 NM_004275	82	-	BC050645 NM_004053 TSC_hg19_v1_chr6_+_41888966 AK095253	182	+	BC062627 TSC_hg19_v1_chr6_+_41888994	201	+	AK097385|MED20|9477|mediator complex subunit 20##EU446931|MED20|9477|mediator complex subunit 20##BC040950|MED20|9477|mediator complex subunit 20##AK023092|MED20|9477|mediator complex subunit 20##AF097725|MED20|9477|mediator complex subunit 20##BC032552|MED20|9477|mediator complex subunit 20##AK293412|MED20|9477|mediator complex subunit 20##BC014176|USP49|25862|ubiquitin specific peptidase 49##NM_018561|USP49|25862|ubiquitin specific peptidase 49##BC107435|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AF216754|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC018624|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC067252|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC022274|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AB435319|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##L34839|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC019866|MED20|9477|mediator complex subunit 20##AK300573|MED20|9477|mediator complex subunit 20##AK307070|MED20|9477|mediator complex subunit 20##BC012618|MED20|9477|mediator complex subunit 20##NM_004275|MED20|9477|mediator complex subunit 20##BC050645|BYSL|705|bystin-like##NM_004053|BYSL|705|bystin-like##BC062627|BYSL|705|bystin-like	0.0	
chr6	5746744	5746906	reg1032767.p1	4.051	+	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-485135	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-485563	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-485659	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	260316	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	260872	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	574060	-	NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide	0.999488	CTCF.p2:-4:0.999
chr7	130130742	130130922	reg1027005.p1	4.051	+	TSC_hg19_v1_chr7_+_130126173 AK098397 NM_177524 CR627364 BC090049	-4716	+	BC056162 AK314676 TSC_hg19_v1_chr7_-_130080886 BC018789 AK026098 AJ278890 NM_018718 AK298618 AK311382 AF429308 AF429309	-49955	-	NM_001868 AK131054 AK291493 AK293366 BC005279 X67318 CU675077 DQ890565 DQ893728 BT007313	-110507	+	NM_177525	340	+	TSC_hg19_v1_chr7_+_130131926 D87367 BC011908 D78611 Y11534 BC002413 BC014564 BC018695 NM_002402 AK298984 AK312688	1134	+	TSC_hg19_v1_chr7_+_130132096 AB590216 DQ890762 DQ892764 DQ893925 DQ896009 CU680110 BT007056 CR457040	1292	+	AK098397|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_177524|MEST|4232|mesoderm specific transcript homolog (mouse)##CR627364|MEST|4232|mesoderm specific transcript homolog (mouse)##BC090049|MEST|4232|mesoderm specific transcript homolog (mouse)##BC056162|CEP41|95681|centrosomal protein 41kDa##AK314676|CEP41|95681|centrosomal protein 41kDa##BC018789|CEP41|95681|centrosomal protein 41kDa##AK026098|CEP41|95681|centrosomal protein 41kDa##AJ278890|CEP41|95681|centrosomal protein 41kDa##NM_018718|CEP41|95681|centrosomal protein 41kDa##AK298618|CEP41|95681|centrosomal protein 41kDa##AK311382|CEP41|95681|centrosomal protein 41kDa##AF429308|CEP41|95681|centrosomal protein 41kDa##AF429309|CEP41|95681|centrosomal protein 41kDa##NM_001868|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK131054|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK291493|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK293366|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC005279|CPA1|1357|carboxypeptidase A1 (pancreatic)##X67318|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ890565|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ893728|CPA1|1357|carboxypeptidase A1 (pancreatic)##BT007313|CPA1|1357|carboxypeptidase A1 (pancreatic)##NM_177525|MEST|4232|mesoderm specific transcript homolog (mouse)##D87367|MEST|4232|mesoderm specific transcript homolog (mouse)##BC011908|MEST|4232|mesoderm specific transcript homolog (mouse)##D78611|MEST|4232|mesoderm specific transcript homolog (mouse)##Y11534|MEST|4232|mesoderm specific transcript homolog (mouse)##BC002413|MEST|4232|mesoderm specific transcript homolog (mouse)##BC014564|MEST|4232|mesoderm specific transcript homolog (mouse)##BC018695|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_002402|MEST|4232|mesoderm specific transcript homolog (mouse)##AK298984|MEST|4232|mesoderm specific transcript homolog (mouse)##AK312688|MEST|4232|mesoderm specific transcript homolog (mouse)##DQ890762|MEST|4232|mesoderm specific transcript homolog (mouse)##DQ892764|MEST|4232|mesoderm specific transcript homolog (mouse)##DQ893925|MEST|4232|mesoderm specific transcript homolog (mouse)##DQ896009|MEST|4232|mesoderm specific transcript homolog (mouse)##BT007056|MEST|4232|mesoderm specific transcript homolog (mouse)##CR457040|MEST|4232|mesoderm specific transcript homolog (mouse)	0.0	
chr8	23056151	23056288	reg1033826.p2	4.051	+	AF023849 AF021232 AF021233 AF029761 AY358285 BC052270 AK313528 NM_003840 TSC_hg19_v1_chr8_-_23021544	-34724	-	NM_003841 AK298664 BC017852 TSC_hg19_v1_chr8_+_22960433 AK313213 AK298718 AF012536 AY358281 AF016267 AF033854 AF014794 BC125041 BC125042 AF020502 AF012629 CR541857	-95739	+	TSC_hg19_v1_chr8_-_22926545 AF192548 AF016266 AF016268 AF153687 AK291216 AF012535 AF016849 AY358277 BX538104 AK298602 BC001281 NM_003842 NM_147187	-129625	-	FJ795027 AB590225 BT006906 CU680426 DQ891791 DQ894973 JF729355 U90875 TSC_hg19_v1_chr8_-_23082598 AK291299 BC012866	26393	-	TSC_hg19_v1_chr8_-_23082664 NM_003844	26447	-	AK097202 NM_152272 BC042050	44939	+	AF023849|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF021232|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF021233|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF029761|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AY358285|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##BC052270|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AK313528|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##NM_003840|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##NM_003841|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298664|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC017852|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK313213|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298718|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012536|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AY358281|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF016267|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF033854|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF014794|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125041|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125042|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF020502|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012629|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##CR541857|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF192548|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016266|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016268|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF153687|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK291216|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012535|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016849|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AY358277|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BX538104|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK298602|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BC001281|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003842|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_147187|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##FJ795027|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BT006906|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ891791|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ894973|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##JF729355|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##U90875|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##AK291299|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BC012866|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##NM_003844|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##AK097202|CHMP7|91782|charged multivesicular body protein 7##NM_152272|CHMP7|91782|charged multivesicular body protein 7##BC042050|CHMP7|91782|charged multivesicular body protein 7	0.473063	CTCF.p2:-16:0.473
chrX	7108339	7108433	reg1040381.p1	4.051	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	-42194	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	-42435	+	AF167078 AF167079 NM_016379	-655228	-	NM_000351 M16505 J04964 AK314034	29115	+	AF167081 NM_013452	701916	+	AK289888 U03886 NM_004650 BC020746	787064	-	M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S##AF167081|VCX|26609|variable charge, X-linked##NM_013452|VCX|26609|variable charge, X-linked##AK289888|PNPLA4|8228|patatin-like phospholipase domain containing 4##U03886|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_004650|PNPLA4|8228|patatin-like phospholipase domain containing 4##BC020746|PNPLA4|8228|patatin-like phospholipase domain containing 4	0.826444	CTCF.p2:5:0.826
chr10	95506635	95506760	reg1035090.p2	4.050	+	TSC_hg19_v1_chr10_-_95462320 AJ431721 AJ431722 AJ431723 AJ431724 AJ431725 AK090955 AX746703 NM_145246	-44362	-	NM_006204 U31973 BC111377	-134290	+	X00129 TSC_hg19_v1_chr10_-_95360993 BC020633 NM_006744	-145719	-	NM_005097 BC022500 AF055636 AF473548 AK309416 AY358885 AK303956	10949	+	TSC_hg19_v1_chr10_+_95653753 AK091309 AX746907 NM_001134658 NM_153226 BC036382 BC058549 BC143283 BC143284 BC104814 BC047102	147043	+	TSC_hg19_v1_chr10_+_95753696 AB040949 BC151854 NM_016341	247017	+	AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_006204|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##U31973|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##BC111377|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##X00129|RBP4|5950|retinol binding protein 4, plasma##BC020633|RBP4|5950|retinol binding protein 4, plasma##NM_006744|RBP4|5950|retinol binding protein 4, plasma##NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1##BC022500|LGI1|9211|leucine-rich, glioma inactivated 1##AF055636|LGI1|9211|leucine-rich, glioma inactivated 1##AF473548|LGI1|9211|leucine-rich, glioma inactivated 1##AK309416|LGI1|9211|leucine-rich, glioma inactivated 1##AY358885|LGI1|9211|leucine-rich, glioma inactivated 1##AK303956|LGI1|9211|leucine-rich, glioma inactivated 1##AK091309|SLC35G1|159371|solute carrier family 35, member G1##NM_001134658|SLC35G1|159371|solute carrier family 35, member G1##NM_153226|SLC35G1|159371|solute carrier family 35, member G1##BC036382|SLC35G1|159371|solute carrier family 35, member G1##BC143284|SLC35G1|159371|solute carrier family 35, member G1##BC104814|SLC35G1|159371|solute carrier family 35, member G1##BC047102|SLC35G1|159371|solute carrier family 35, member G1##AB040949|PLCE1|51196|phospholipase C, epsilon 1##BC151854|PLCE1|51196|phospholipase C, epsilon 1##NM_016341|PLCE1|51196|phospholipase C, epsilon 1	0.538821	CTCF.p2:-18:0.539
chr11	41222774	41222871	reg1019640.p1	4.050	+	AB046800 NM_020929	-907159	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-908228	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-4603020	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	2110696	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	2110742	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	2110818	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.313558	
chr11	728045	728112	reg1006035.p1	4.050	+	AK027765 TSC_hg19_v1_chr11_+_722322	-5776	+	TSC_hg19_v1_chr11_+_706613 BC080636	-21453	+	TSC_hg19_v1_chr11_+_706230 NM_022772 AK025588 AK025824 AK225311 AK294041 AK222903	-21909	+	TSC_hg19_v1_chr11_+_747426 BC010103 BC009680	19347	+	TSC_hg19_v1_chr11_+_747430 L19437 NM_006755	19356	+	TSC_hg19_v1_chr11_+_747461 AK295537 AK313427 AK130060 AB528639 CU679621 BC018847	19388	+	AK027765|EPS8L2|64787|EPS8-like 2##BC080636|EPS8L2|64787|EPS8-like 2##NM_022772|EPS8L2|64787|EPS8-like 2##AK025588|EPS8L2|64787|EPS8-like 2##AK025824|EPS8L2|64787|EPS8-like 2##AK225311|EPS8L2|64787|EPS8-like 2##AK294041|EPS8L2|64787|EPS8-like 2##AK222903|EPS8L2|64787|EPS8-like 2##BC010103|TALDO1|6888|transaldolase 1##BC009680|TALDO1|6888|transaldolase 1##L19437|TALDO1|6888|transaldolase 1##NM_006755|TALDO1|6888|transaldolase 1##AK295537|TALDO1|6888|transaldolase 1##AK313427|TALDO1|6888|transaldolase 1##BC018847|TALDO1|6888|transaldolase 1	0.998918	
chr1	42501334	42501428	reg1029571.p2	4.050	+	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	-117008	-	TSC_hg19_v1_chr1_-_42384357 BC040942	-117039	-	BC034393 X55177 M65199 NM_001956	-551062	-	TSC_hg19_v1_chr1_-_42501606 BC046120	248	-	NM_007102 U34279 BC093781 Z50753 BC093779 BC069301	117715	+	M95174 M97496 NM_033553	129009	-	AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_007102|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##U34279|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC093781|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##Z50753|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC093779|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##BC069301|GUCA2B|2981|guanylate cyclase activator 2B (uroguanylin)##M95174|GUCA2A|2980|guanylate cyclase activator 2A (guanylin)##M97496|GUCA2A|2980|guanylate cyclase activator 2A (guanylin)##NM_033553|GUCA2A|2980|guanylate cyclase activator 2A (guanylin)	0.361077	CTCF.p2:25:0.361
chr14	35610306	35610380	reg1008899.p2	4.050	+	TSC_hg19_v1_chr14_+_35591757 AK301931 BC050339 BC044580 BC001542 AK304066 BC032221 NM_014672 AB002389 BX161394 BX161487 AK303508	-18491	+	AK293717 BX248043 TSC_hg19_v1_chr14_-_35591728	-18653	-	AK000651 AK225512 AK225447 TSC_hg19_v1_chr14_-_35591505 BC063438 BC100021 AY157304 AY157305 NM_017917	-18865	-	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	151228	+	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	151300	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	263581	-	AK301931|KIAA0391|9692|KIAA0391##BC044580|KIAA0391|9692|KIAA0391##BC001542|KIAA0391|9692|KIAA0391##AK304066|KIAA0391|9692|KIAA0391##BC032221|KIAA0391|9692|KIAA0391##NM_014672|KIAA0391|9692|KIAA0391##AB002389|KIAA0391|9692|KIAA0391##BX161394|KIAA0391|9692|KIAA0391##BX161487|KIAA0391|9692|KIAA0391##AK303508|KIAA0391|9692|KIAA0391##AK293717|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BX248043|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK000651|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK225512|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK225447|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BC063438|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##BC100021|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AY157304|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AY157305|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##NM_017917|PPP2R3C|55012|protein phosphatase 2, regulatory subunit B'', gamma##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha	0.0	
chr17	57976647	57976764	reg1032943.p1	4.050	+	TSC_hg19_v1_chr17_+_57970492 AK300202 AK312875 BC053365 M60724 AB384946 CU690966 AK297147	-6163	+	NM_003161 BC036033 TSC_hg19_v1_chr17_+_57970481 AK293247	-6243	+	AK024096 AK298492 AK301312 BC000258 AK022771 AK315172 NM_001193609 NM_001193610 NM_001193611 NM_001193612 NM_001193613 NM_016261	-6514	-	TSC_hg19_v1_chr17_-_58042085 AK295162 BC088365	65373	-	BC006971 TSC_hg19_v1_chr17_-_58042099 AK294806 AK296197 NM_016125	65402	-	TSC_hg19_v1_chr17_-_58156283 AK127708 AK314655 BC119771 BC119813 BX640819 BX640831 CR627418 NM_022070 AF349752	179649	-	AK300202|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK312875|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC053365|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##M60724|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK297147|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK024096|TUBD1|51174|tubulin, delta 1##AK298492|TUBD1|51174|tubulin, delta 1##AK301312|TUBD1|51174|tubulin, delta 1##BC000258|TUBD1|51174|tubulin, delta 1##AK022771|TUBD1|51174|tubulin, delta 1##AK315172|TUBD1|51174|tubulin, delta 1##NM_001193609|TUBD1|51174|tubulin, delta 1##NM_001193610|TUBD1|51174|tubulin, delta 1##NM_001193611|TUBD1|51174|tubulin, delta 1##NM_001193612|TUBD1|51174|tubulin, delta 1##NM_001193613|TUBD1|51174|tubulin, delta 1##NM_016261|TUBD1|51174|tubulin, delta 1##AK295162|RNFT1|51136|ring finger protein, transmembrane 1##BC088365|RNFT1|51136|ring finger protein, transmembrane 1##BC006971|RNFT1|51136|ring finger protein, transmembrane 1##AK294806|RNFT1|51136|ring finger protein, transmembrane 1##AK296197|RNFT1|51136|ring finger protein, transmembrane 1##NM_016125|RNFT1|51136|ring finger protein, transmembrane 1##AK127708|HEATR6|63897|HEAT repeat containing 6##AK314655|HEATR6|63897|HEAT repeat containing 6##BC119771|HEATR6|63897|HEAT repeat containing 6##BC119813|HEATR6|63897|HEAT repeat containing 6##BX640819|HEATR6|63897|HEAT repeat containing 6##BX640831|HEATR6|63897|HEAT repeat containing 6##CR627418|HEATR6|63897|HEAT repeat containing 6##NM_022070|HEATR6|63897|HEAT repeat containing 6##AF349752|HEATR6|63897|HEAT repeat containing 6	0.0	
chr19	12907211	12907391	reg1002327.p1	4.050	+	AK222532 TSC_hg19_v1_chr19_+_12902299 AK313737 BC110372 BC004250 BC009465 BC009466 NM_002229 X51345	-4988	+	TSC_hg19_v1_chr19_+_12902286 DQ650707	-5011	+	TSC_hg19_v1_chr19_-_12886422 NM_001100176 NM_013312	-20874	-	BC000452 BC003022 BC064138 TSC_hg19_v1_chr19_-_12912615 Z22548 AK289485 AK293957 BC039428 AK022395 NM_005809 NM_181738	5363	-	TSC_hg19_v1_chr19_+_12917397 AK315327	10096	+	TSC_hg19_v1_chr19_+_12917432 NM_006397 BC011748 AY363912 Z97029 CR456841	10147	+	AK222532|JUNB|3726|jun B proto-oncogene##AK313737|JUNB|3726|jun B proto-oncogene##BC004250|JUNB|3726|jun B proto-oncogene##BC009465|JUNB|3726|jun B proto-oncogene##BC009466|JUNB|3726|jun B proto-oncogene##NM_002229|JUNB|3726|jun B proto-oncogene##X51345|JUNB|3726|jun B proto-oncogene##NM_001100176|HOOK2|29911|hook homolog 2 (Drosophila)##NM_013312|HOOK2|29911|hook homolog 2 (Drosophila)##BC000452|PRDX2|7001|peroxiredoxin 2##BC003022|PRDX2|7001|peroxiredoxin 2##BC064138|PRDX2|7001|peroxiredoxin 2##Z22548|PRDX2|7001|peroxiredoxin 2##AK289485|PRDX2|7001|peroxiredoxin 2##AK293957|PRDX2|7001|peroxiredoxin 2##BC039428|PRDX2|7001|peroxiredoxin 2##AK022395|PRDX2|7001|peroxiredoxin 2##NM_005809|PRDX2|7001|peroxiredoxin 2##NM_181738|PRDX2|7001|peroxiredoxin 2##AK315327|RNASEH2A|10535|ribonuclease H2, subunit A##NM_006397|RNASEH2A|10535|ribonuclease H2, subunit A##BC011748|RNASEH2A|10535|ribonuclease H2, subunit A##AY363912|RNASEH2A|10535|ribonuclease H2, subunit A##Z97029|RNASEH2A|10535|ribonuclease H2, subunit A##CR456841|RNASEH2A|10535|ribonuclease H2, subunit A	0.0	
chr19	18967379	18967476	reg1031977.p1	4.050	+	TSC_hg19_v1_chr19_+_18942822 U65533 AF074016 D86988 U59323	-24614	+	TSC_hg19_v1_chr19_+_18942742 NM_002911 BC039817	-24682	+	AB086984 BC033676 BC110847 L32137 BC125092 TSC_hg19_v1_chr19_-_18902115 AK074508 AK223216 AK290595 AK296586 AK297798 AK297814 NM_000095	-65330	-	BC032615 TSC_hg19_v1_chr19_-_19006935 M62302 BC022450 NM_001492 NM_021267 NM_198207	39524	-	TSC_hg19_v1_chr19_-_19007395 BC084582 AK293463	40038	-	AB528108 AM393761 CR456886 DQ893417 DQ896735 TSC_hg19_v1_chr19_-_19030164 BC017285 BC003155 AJ249366 AL136928 BC007250	62738	-	U65533|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##AF074016|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##D86988|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##U59323|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##NM_002911|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##BC039817|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##AB086984|COMP|1311|cartilage oligomeric matrix protein##BC033676|COMP|1311|cartilage oligomeric matrix protein##BC110847|COMP|1311|cartilage oligomeric matrix protein##L32137|COMP|1311|cartilage oligomeric matrix protein##BC125092|COMP|1311|cartilage oligomeric matrix protein##AK074508|COMP|1311|cartilage oligomeric matrix protein##AK223216|COMP|1311|cartilage oligomeric matrix protein##AK290595|COMP|1311|cartilage oligomeric matrix protein##AK296586|COMP|1311|cartilage oligomeric matrix protein##AK297798|COMP|1311|cartilage oligomeric matrix protein##AK297814|COMP|1311|cartilage oligomeric matrix protein##NM_000095|COMP|1311|cartilage oligomeric matrix protein##BC032615|CERS1|10715|ceramide synthase 1##M62302|GDF1|2657|growth differentiation factor 1##NM_001492|GDF1|2657|growth differentiation factor 1##NM_021267|CERS1|10715|ceramide synthase 1##NM_198207|CERS1|10715|ceramide synthase 1##BC084582|CERS1|10715|ceramide synthase 1##AM393761|COPE|11316|coatomer protein complex, subunit epsilon##CR456886|COPE|11316|coatomer protein complex, subunit epsilon##DQ893417|COPE|11316|coatomer protein complex, subunit epsilon##DQ896735|COPE|11316|coatomer protein complex, subunit epsilon##BC017285|COPE|11316|coatomer protein complex, subunit epsilon##BC003155|COPE|11316|coatomer protein complex, subunit epsilon##AJ249366|COPE|11316|coatomer protein complex, subunit epsilon##AL136928|COPE|11316|coatomer protein complex, subunit epsilon##BC007250|COPE|11316|coatomer protein complex, subunit epsilon	0.327093	CTCF.p2:4:0.327
chr20	39331249	39331408	reg1030354.p1	4.050	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-13451	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-1740339	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-1776260	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	326166	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	326336	+	TSC_hg19_v1_chr20_+_39765861 AB210028	434534	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.566166	CTCF.p2:29:0.566
chr3	101753649	101753821	reg1035085.p2	4.050	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-185361	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-206775	+	AK289689 NM_001134456	-255450	+	AY090780 NM_175056 BC143817	400132	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	3331845	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	3332087	+	AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule	0.0	
chr3	50589274	50589350	reg1037084.p1	4.050	+	AJ251367 AJ251368 AB011130 BC152438 AB383908 NM_001005505 NM_001174051 NM_006030 AF040709 AF042792 AK310138 TSC_hg19_v1_chr3_-_50541066	-48352	-	TSC_hg19_v1_chr3_-_50396943 NM_007024 AK314166	-192374	-	BC017367 TSC_hg19_v1_chr3_-_50396920 BC011948	-192402	-	AK124438 AK311093 TSC_hg19_v1_chr3_-_50605192 BC034766 AK313128 AK308074 AK309486 AL833938 AK130227 NM_001171740 NM_001171743 NM_016210	15831	-	TSC_hg19_v1_chr3_+_50606919 BX537562 NM_016173 AK314023 AF172244 AK124369	17636	+	AF188706 NM_001171741	19127	-	AJ251367|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AJ251368|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AB011130|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##BC152438|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_001005505|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_001174051|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_006030|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AF040709|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AF042792|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AK310138|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_007024|TMEM115|11070|transmembrane protein 115##AK314166|TMEM115|11070|transmembrane protein 115##BC017367|TMEM115|11070|transmembrane protein 115##BC011948|TMEM115|11070|transmembrane protein 115##AK124438|C3orf18|51161|chromosome 3 open reading frame 18##AK311093|C3orf18|51161|chromosome 3 open reading frame 18##BC034766|C3orf18|51161|chromosome 3 open reading frame 18##AK313128|C3orf18|51161|chromosome 3 open reading frame 18##AK308074|C3orf18|51161|chromosome 3 open reading frame 18##AK309486|C3orf18|51161|chromosome 3 open reading frame 18##AL833938|C3orf18|51161|chromosome 3 open reading frame 18##AK130227|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171740|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171743|C3orf18|51161|chromosome 3 open reading frame 18##NM_016210|C3orf18|51161|chromosome 3 open reading frame 18##BX537562|HEMK1|51409|HemK methyltransferase family member 1##NM_016173|HEMK1|51409|HemK methyltransferase family member 1##AK314023|HEMK1|51409|HemK methyltransferase family member 1##AF172244|HEMK1|51409|HemK methyltransferase family member 1##AK124369|HEMK1|51409|HemK methyltransferase family member 1##AF188706|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171741|C3orf18|51161|chromosome 3 open reading frame 18	1.097757	CTCF.p2:-17:0.610	CTCF.p2:-43:0.487
chr6	111727438	111727560	reg1033963.p1	4.050	+	TSC_hg19_v1_chr6_+_111580568 BC036115	-146927	+	NM_153369 TSC_hg19_v1_chr6_+_111580541 AK093136 AX747946 AK292735 AK315016	-146976	+	AB057445 NM_018593 BC066985 TSC_hg19_v1_chr6_+_111408810	-318704	+	BC038986 AF303220 AF157476 AF179428 AF179429 TSC_hg19_v1_chr6_-_111804167	76649	-	BC035823 TSC_hg19_v1_chr6_-_111804371	76854	-	AF071798 NM_002912 TSC_hg19_v1_chr6_-_111804420 AF058701	76925	-	BC036115|KIAA1919|91749|KIAA1919##NM_153369|KIAA1919|91749|KIAA1919##AK093136|KIAA1919|91749|KIAA1919##AK292735|KIAA1919|91749|KIAA1919##AK315016|KIAA1919|91749|KIAA1919##AB057445|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##NM_018593|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##BC066985|SLC16A10|117247|solute carrier family 16, member 10 (aromatic amino acid transporter)##AF303220|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF157476|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179428|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF179429|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##BC035823|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF071798|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##NM_002912|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)##AF058701|REV3L|5980|REV3-like, catalytic subunit of DNA polymerase zeta (yeast)	0.0	
chr10	11155396	11155576	reg1005393.p2	4.049	+	U69546 TSC_hg19_v1_chr10_+_11060121	-95370	+	AF090694 TSC_hg19_v1_chr10_+_11060072	-95415	+	TSC_hg19_v1_chr10_+_11059882 AK314087 NM_006561 BC036391	-95596	+	AK299983 NM_001025076 NM_001083591 TSC_hg19_v1_chr10_+_11207008	51483	+	AK297313 TSC_hg19_v1_chr10_+_11207057 AK299992 AF036956 AK293164 AF432906	51610	+	TSC_hg19_v1_chr10_+_11207244 AK316354	51759	+	U69546|CELF2|10659|CUGBP, Elav-like family member 2##AF090694|CELF2|10659|CUGBP, Elav-like family member 2##AK314087|CELF2|10659|CUGBP, Elav-like family member 2##NM_006561|CELF2|10659|CUGBP, Elav-like family member 2##BC036391|CELF2|10659|CUGBP, Elav-like family member 2##AK299983|CELF2|10659|CUGBP, Elav-like family member 2##NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2##NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2##AK297313|CELF2|10659|CUGBP, Elav-like family member 2##AK299992|CELF2|10659|CUGBP, Elav-like family member 2##AF036956|CELF2|10659|CUGBP, Elav-like family member 2##AK293164|CELF2|10659|CUGBP, Elav-like family member 2##AF432906|CELF2|10659|CUGBP, Elav-like family member 2##AK316354|CELF2|10659|CUGBP, Elav-like family member 2	0.0	
chr1	221915161	221915267	reg1022725.p1	4.049	+	NM_144728	-4413	-	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	-862115	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	-862300	+	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	194	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	216	-	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	272	-	NM_144728|DUSP10|11221|dual specificity phosphatase 10##DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10	0.0	
chr16	68730612	68730721	reg1032456.p2	4.049	+	X63629 TSC_hg19_v1_chr16_+_68679239 AB527800 EU832319 EU832404	-51412	+	TSC_hg19_v1_chr16_+_68679201 AK296968 AK312554 AK225396	-51461	+	NM_001793	-52516	+	AK312551 TSC_hg19_v1_chr16_+_68771194 AK297913 EU709494 NM_004360 BC141838 BC146662 L08599	40535	+	BC144283 TSC_hg19_v1_chr16_+_68771216 AK290012 Z13009	40553	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	40579	+	X63629|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##EU832319|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##EU832404|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK296968|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK312554|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK225396|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##NM_001793|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK312551|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK297913|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##EU709494|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##NM_004360|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC141838|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC146662|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##L08599|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC144283|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK290012|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##Z13009|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)	0.58095	CTCF.p2:-7:0.581
chr19	2315770	2315893	reg1010548.p1	4.049	+	NM_001101391	-7676	-	TSC_hg19_v1_chr19_+_2289998 AK091795 AX747191	-25834	+	AK127680 BC107678 NM_198532	-33654	-	BC018621 AF182293 TSC_hg19_v1_chr19_-_2328581 AK092837 AX747757 NM_016199	12758	-	BC093046 NM_001077238 NM_152988 TSC_hg19_v1_chr19_+_2328668	12819	+	AB040965 AJ420897 TSC_hg19_v1_chr19_+_2328682 AY169315 AK308973	12849	+	NM_001101391|LINGO3|645191|leucine rich repeat and Ig domain containing 3##AK127680|C19orf35|374872|chromosome 19 open reading frame 35##BC107678|C19orf35|374872|chromosome 19 open reading frame 35##NM_198532|C19orf35|374872|chromosome 19 open reading frame 35##BC018621|LSM7|51690|LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182293|LSM7|51690|LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_016199|LSM7|51690|LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC093046|SPPL2B|56928|signal peptide peptidase-like 2B##NM_001077238|SPPL2B|56928|signal peptide peptidase-like 2B##NM_152988|SPPL2B|56928|signal peptide peptidase-like 2B##AB040965|SPPL2B|56928|signal peptide peptidase-like 2B##AJ420897|SPPL2B|56928|signal peptide peptidase-like 2B##AY169315|SPPL2B|56928|signal peptide peptidase-like 2B	0.824548	CTCF.p2:28:0.825
chr5	173248348	173248528	reg1033364.p2	4.049	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-204765	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-204810	-	BC003114 TSC_hg19_v1_chr5_-_173043602	-204841	-	TSC_hg19_v1_chr5_+_173315343 NM_030627	66940	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	167752	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	224273	+	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein	0.0	
chr6	158182514	158182614	reg1034156.p1	4.049	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-380025	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-437347	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-437980	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	61725	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	61810	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	220323	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.0	
chr7	134854076	134854204	reg1016303.p2	4.049	+	NM_018295 TSC_hg19_v1_chr7_+_134832838 AK001862 AK225055 AK301268 BC020942	-21293	+	TSC_hg19_v1_chr7_+_134671258 AK302827 NM_178563 BC030651 AL832281 AK023045 AK311252	-182855	+	BC014035 TSC_hg19_v1_chr7_+_134576197 BC061926 BC005006 D90452 D90453	-277867	+	NM_001243753 NM_001243755	85	-	TSC_hg19_v1_chr7_-_134855252 NM_001243752	1127	-	TSC_hg19_v1_chr7_-_134855449 AK026103 BC000168 BC050676 BC067350	1279	-	NM_018295|TMEM140|55281|transmembrane protein 140##AK001862|TMEM140|55281|transmembrane protein 140##AK225055|TMEM140|55281|transmembrane protein 140##AK301268|TMEM140|55281|transmembrane protein 140##BC020942|TMEM140|55281|transmembrane protein 140##AK302827|AGBL3|340351|ATP/GTP binding protein-like 3##NM_178563|AGBL3|340351|ATP/GTP binding protein-like 3##BC030651|AGBL3|340351|ATP/GTP binding protein-like 3##AL832281|AGBL3|340351|ATP/GTP binding protein-like 3##AK023045|AGBL3|340351|ATP/GTP binding protein-like 3##BC014035|CALD1|800|caldesmon 1##BC061926|CALD1|800|caldesmon 1##BC005006|CALD1|800|caldesmon 1##D90452|CALD1|800|caldesmon 1##D90453|CALD1|800|caldesmon 1##NM_001243753|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243755|C7orf49|78996|chromosome 7 open reading frame 49##NM_001243752|C7orf49|78996|chromosome 7 open reading frame 49##AK026103|C7orf49|78996|chromosome 7 open reading frame 49##BC000168|C7orf49|78996|chromosome 7 open reading frame 49##BC067350|C7orf49|78996|chromosome 7 open reading frame 49	0.046859	
chr8	61839150	61839307	reg1026330.p2	4.049	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-247826	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-247940	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-409478	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	361322	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	763118	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	787790	-	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase	0.0	
chr11	73336996	73337117	reg1002574.p2	4.048	+	D87470 TSC_hg19_v1_chr11_-_73309158 AK292054 EF197985 BC052341 EF363480 NM_015159	-27858	-	TSC_hg19_v1_chr11_+_73087683 AF319553 NM_032871	-249365	+	TSC_hg19_v1_chr11_+_73087471 AK027899 NM_152222 BC051810 BC017279	-249619	+	AF101054 NM_001130033 NM_021200 U89715	20166	+	NM_001130034 NM_001130035 BC008075 AB209716 AK289620 TSC_hg19_v1_chr11_+_73358695 AK296033 AK301299 AF093249 AF100612 AK289909 AK311158	21607	+	AK290109 NM_001130036	22678	+	D87470|FAM168A|23201|family with sequence similarity 168, member A##AK292054|FAM168A|23201|family with sequence similarity 168, member A##EF197985|FAM168A|23201|family with sequence similarity 168, member A##BC052341|FAM168A|23201|family with sequence similarity 168, member A##EF363480|FAM168A|23201|family with sequence similarity 168, member A##NM_015159|FAM168A|23201|family with sequence similarity 168, member A##AF319553|RELT|84957|RELT tumor necrosis factor receptor##NM_032871|RELT|84957|RELT tumor necrosis factor receptor##AK027899|RELT|84957|RELT tumor necrosis factor receptor##NM_152222|RELT|84957|RELT tumor necrosis factor receptor##BC051810|RELT|84957|RELT tumor necrosis factor receptor##BC017279|RELT|84957|RELT tumor necrosis factor receptor##AF101054|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_021200|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##U89715|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130034|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130035|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##BC008075|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AB209716|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289620|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK296033|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK301299|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF093249|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF100612|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK289909|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK311158|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AK290109|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130036|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1	0.0	
chr1	184618658	184618839	reg1031791.p1	4.048	+	TSC_hg19_v1_chr1_+_184356377 AK056487	-262360	+	AF312864 TSC_hg19_v1_chr1_+_184356245 AY258286	-262482	+	TSC_hg19_v1_chr1_+_184356194 BC028567	-262551	+	BC144149 BC144150 AF288393 TSC_hg19_v1_chr1_-_184723746 AB385131	105009	-	TSC_hg19_v1_chr1_-_184723964 BC070173 BC105586	105217	-	AK225171 TSC_hg19_v1_chr1_-_184723985 AK315118	105236	-	AK056487|C1orf21|81563|chromosome 1 open reading frame 21##AF312864|C1orf21|81563|chromosome 1 open reading frame 21##AY258286|C1orf21|81563|chromosome 1 open reading frame 21##BC028567|C1orf21|81563|chromosome 1 open reading frame 21##BC144149|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC144150|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AF288393|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC070173|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##BC105586|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK225171|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3##AK315118|EDEM3|80267|ER degradation enhancer, mannosidase alpha-like 3	0.0	
chr13	113922904	113922971	reg1046300.p2	4.048	+	TSC_hg19_v1_chr13_+_113863926 BC008308 NM_001008895 AB590820 AB178950 AY365124	-59003	+	TSC_hg19_v1_chr13_+_113863089 AL833355 NM_003589 AF077188	-59836	+	TSC_hg19_v1_chr13_-_113862984 CU677649 AK001302 BC031246 AK309321 AF183426 BC016614 AK023313 AK002167 AK289462 AK001185 AK000888 NM_001127202 NM_001127203 NM_018386	-59951	-	TSC_hg19_v1_chr13_+_113951509 NM_005561	28550	+	TSC_hg19_v1_chr13_+_113951553 AK092398 BC025335	28609	+	TSC_hg19_v1_chr13_+_113951612 BC093044 BC021288 AK301584 AB463850 DQ892614 DQ895854	28751	+	BC008308|CUL4A|8451|cullin 4A##NM_001008895|CUL4A|8451|cullin 4A##AB178950|CUL4A|8451|cullin 4A##AY365124|CUL4A|8451|cullin 4A##AL833355|CUL4A|8451|cullin 4A##NM_003589|CUL4A|8451|cullin 4A##AF077188|CUL4A|8451|cullin 4A##AK001302|PCID2|55795|PCI domain containing 2##BC031246|PCID2|55795|PCI domain containing 2##AK309321|PCID2|55795|PCI domain containing 2##AF183426|PCID2|55795|PCI domain containing 2##BC016614|PCID2|55795|PCI domain containing 2##AK023313|PCID2|55795|PCI domain containing 2##AK002167|PCID2|55795|PCI domain containing 2##AK289462|PCID2|55795|PCI domain containing 2##AK001185|PCID2|55795|PCI domain containing 2##AK000888|PCID2|55795|PCI domain containing 2##NM_001127202|PCID2|55795|PCI domain containing 2##NM_001127203|PCID2|55795|PCI domain containing 2##NM_018386|PCID2|55795|PCI domain containing 2##NM_005561|LAMP1|3916|lysosomal-associated membrane protein 1##AK092398|LAMP1|3916|lysosomal-associated membrane protein 1##BC025335|LAMP1|3916|lysosomal-associated membrane protein 1##BC093044|LAMP1|3916|lysosomal-associated membrane protein 1##BC021288|LAMP1|3916|lysosomal-associated membrane protein 1##AK301584|LAMP1|3916|lysosomal-associated membrane protein 1##DQ892614|LAMP1|3916|lysosomal-associated membrane protein 1##DQ895854|LAMP1|3916|lysosomal-associated membrane protein 1	0.0	
chr15	31521451	31521631	reg1031368.p1	4.048	+	GQ502181 HM135791 NM_001252020	-68113	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-127624	-	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	-237774	-	NM_001243538	1508	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	97797	+	AJ430383 NM_130901	426000	-	GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10##NM_001243538|LOC283710|283710|uncharacterized LOC283710##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A	0.955894	CTCF.p2:-44:0.956
chr17	53534219	53534333	reg1033534.p1	4.048	+	CR541893 DQ892362 DQ895569 TSC_hg19_v1_chr17_-_53499293 X85750 AK312760 AK303810 BC026324 AY424289 NM_012329	-35021	-	TSC_hg19_v1_chr17_+_53344967 AK295726 AK074289	-189290	+	AK290043 TSC_hg19_v1_chr17_+_53343204	-191089	+	BC010128 AK001832 NM_018286	265873	-	AK095175 NM_001099640	275186	-	NM_021213 TSC_hg19_v1_chr17_+_53828339 AF087857 AF151638	294099	+	CR541893|MMD|23531|monocyte to macrophage differentiation-associated##DQ892362|MMD|23531|monocyte to macrophage differentiation-associated##DQ895569|MMD|23531|monocyte to macrophage differentiation-associated##X85750|MMD|23531|monocyte to macrophage differentiation-associated##AK312760|MMD|23531|monocyte to macrophage differentiation-associated##AK303810|MMD|23531|monocyte to macrophage differentiation-associated##BC026324|MMD|23531|monocyte to macrophage differentiation-associated##AY424289|MMD|23531|monocyte to macrophage differentiation-associated##NM_012329|MMD|23531|monocyte to macrophage differentiation-associated##AK295726|HLF|3131|hepatic leukemia factor##AK074289|HLF|3131|hepatic leukemia factor##AK290043|HLF|3131|hepatic leukemia factor##BC010128|TMEM100|55273|transmembrane protein 100##AK001832|TMEM100|55273|transmembrane protein 100##NM_018286|TMEM100|55273|transmembrane protein 100##AK095175|TMEM100|55273|transmembrane protein 100##NM_001099640|TMEM100|55273|transmembrane protein 100##NM_021213|PCTP|58488|phosphatidylcholine transfer protein##AF087857|PCTP|58488|phosphatidylcholine transfer protein##AF151638|PCTP|58488|phosphatidylcholine transfer protein	0.0	
chr19	38478295	38478372	reg1011332.p2	4.048	+	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	-80421	+	TSC_hg19_v1_chr19_+_38397847 NM_015073	-80476	+	AK302913 AY026504 AK128826 NM_031951	-81059	-	AB463560 GQ358728 BC125152 BC125153 U43843 AK308563 NM_001135155 NM_004647	236502	-	BC021191 TSC_hg19_v1_chr19_-_38720320 NM_001135156	241983	-	TSC_hg19_v1_chr19_-_38720336 AK297581	242001	-	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##AK302913|WDR87|83889|WD repeat domain 87##AY026504|WDR87|83889|WD repeat domain 87##AK128826|WDR87|83889|WD repeat domain 87##NM_031951|WDR87|83889|WD repeat domain 87##GQ358728|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125152|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125153|DPF1|8193|D4, zinc and double PHD fingers family 1##U43843|DPF1|8193|D4, zinc and double PHD fingers family 1##AK308563|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135155|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_004647|DPF1|8193|D4, zinc and double PHD fingers family 1##BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1##AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1	0.0	
chr3	18914107	18914210	reg1034208.p1	4.048	+	BC001744 NM_001131010	-433925	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	-447361	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-1129991	-	AK295633 AY053503 NM_144633 AB209053 AK309034	275846	+	BC028198 AK097644 NM_144715	1061530	-	TSC_hg19_v1_chr3_+_19988586 NM_004162	1074531	+	BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##BC028198|EFHB|151651|EF-hand domain family, member B##AK097644|EFHB|151651|EF-hand domain family, member B##NM_144715|EFHB|151651|EF-hand domain family, member B##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family	0.028028	
chr6	99667784	99667893	reg1029910.p1	4.048	+	TSC_hg19_v1_chr6_-_99395817 AK313076 BC055010 BC039819 NM_012160	-272011	-	TSC_hg19_v1_chr6_-_99395800 BC091484 BC032641	-272049	-	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	-385166	+	BC004869 BC011583 NM_032511	129692	-	AF193016 BC015634 BC001534 BC063463 CU687730 AB590714 AF351615 AK056955 AL136726 NM_017421	174215	-	AF314185 TSC_hg19_v1_chr6_-_99849313 AL080186	181453	-	AK313076|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC055010|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC039819|FBXL4|26235|F-box and leucine-rich repeat protein 4##NM_012160|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC091484|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC032641|FBXL4|26235|F-box and leucine-rich repeat protein 4##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2##BC004869|C6orf168|84553|chromosome 6 open reading frame 168##BC011583|C6orf168|84553|chromosome 6 open reading frame 168##NM_032511|C6orf168|84553|chromosome 6 open reading frame 168##AF193016|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC015634|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC001534|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##BC063463|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AF351615|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AK056955|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AL136726|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##NM_017421|COQ3|51805|coenzyme Q3 homolog, methyltransferase (S. cerevisiae)##AF314185|PNISR|25957|PNN-interacting serine/arginine-rich protein##AL080186|PNISR|25957|PNN-interacting serine/arginine-rich protein	0.431785	CTCF.p2:-1:0.432
chr7	101625289	101625443	reg1028315.p1	4.048	+	M74099 NM_181552	-164485	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-166157	+	BC002778 NM_138403	-352791	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	303031	+	TSC_hg19_v1_chr7_+_101928431 AB000520	303077	+	NM_001146210	371522	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.0	
chr11	15238383	15238495	reg1038716.p1	4.047	+	AB236158 NM_001042536	-101956	+	AB236159 NM_001031853	-104470	+	BC008428 AK291188 BC092468 NM_000728	-143313	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	1185962	-	BC037866 NM_001145811	1191988	-	AF309034 NM_033326	1259486	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	1.08153	CTCF.p2:6:0.957
chr11	17225231	17225334	reg1038619.p1	4.047	+	Y13367 AB385161 HQ258691 BC113658 NM_002645	-33962	-	X79239 AB528349 CU688732 TSC_hg19_v1_chr11_-_17099216 DQ891107 DQ894288 BC000475 BC029732 BC100032 BC006772 AK312060 BC066322 D28429 L01124 NM_001017	-126043	-	AB385210 TSC_hg19_v1_chr11_-_17035962 BC071599 NM_175058	-189317	-	TSC_hg19_v1_chr11_-_17229534 AK309610 AK299474 AK304262 BC040952 BC031681 AK294416 BC035982 AK310248	4215	-	TSC_hg19_v1_chr11_+_17298285 EU039832 EU039833 NM_005013 X76732 BC111556 AF450266	73031	+	TSC_hg19_v1_chr11_+_17332454 BC172867	107201	+	Y13367|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##HQ258691|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##BC113658|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##NM_002645|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##X79239|RPS13|6207|ribosomal protein S13##DQ891107|RPS13|6207|ribosomal protein S13##DQ894288|RPS13|6207|ribosomal protein S13##BC000475|RPS13|6207|ribosomal protein S13##BC029732|RPS13|6207|ribosomal protein S13##BC100032|RPS13|6207|ribosomal protein S13##BC006772|RPS13|6207|ribosomal protein S13##AK312060|RPS13|6207|ribosomal protein S13##BC066322|RPS13|6207|ribosomal protein S13##L01124|RPS13|6207|ribosomal protein S13##NM_001017|RPS13|6207|ribosomal protein S13##BC071599|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##NM_175058|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##AK309610|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK299474|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK304262|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##BC040952|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##BC031681|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK294416|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK310248|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##EU039832|NUCB2|4925|nucleobindin 2##EU039833|NUCB2|4925|nucleobindin 2##NM_005013|NUCB2|4925|nucleobindin 2##X76732|NUCB2|4925|nucleobindin 2##BC111556|NUCB2|4925|nucleobindin 2##AF450266|NUCB2|4925|nucleobindin 2	0.030341	
chr15	88998366	88998505	reg1037285.p2	4.047	+	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	-198469	-	NM_152336	-2313194	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-2660240	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	12193	-	AB049944 NM_022839 NM_176805	12248	+	TSC_hg19_v1_chr15_+_89010935 BC032378 BC012489 AK027059 AK026165 AK222933 AK315407 AK223152 BC000200 CU680342 CU689362 DQ891586 DQ894780 BC009451	12491	+	NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11##BC032378|MRPS11|64963|mitochondrial ribosomal protein S11##BC012489|MRPS11|64963|mitochondrial ribosomal protein S11##AK027059|MRPS11|64963|mitochondrial ribosomal protein S11##AK026165|MRPS11|64963|mitochondrial ribosomal protein S11##AK222933|MRPS11|64963|mitochondrial ribosomal protein S11##AK315407|MRPS11|64963|mitochondrial ribosomal protein S11##AK223152|MRPS11|64963|mitochondrial ribosomal protein S11##BC000200|MRPS11|64963|mitochondrial ribosomal protein S11##DQ891586|MRPS11|64963|mitochondrial ribosomal protein S11##DQ894780|MRPS11|64963|mitochondrial ribosomal protein S11##BC009451|MRPS11|64963|mitochondrial ribosomal protein S11	0.989108	CTCF.p2:-20:0.957
chr17	5129155	5129292	reg1035785.p1	4.047	+	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-33843	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-34050	-	AY143550 NM_004505 X63546 X63547	-97537	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	8878	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	56443	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	193702	-	AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##AY143550|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##NM_004505|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63546|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63547|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa	0.0	
chr17	56017215	56017379	reg1037530.p1	4.047	+	AK000746 NM_017949	-36548	-	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	-89893	-	AK093888 AX748353 NM_170721	-682924	+	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	15379	-	TSC_hg19_v1_chr17_+_56065413 AB593183	48177	+	AB464342 D28118 TSC_hg19_v1_chr17_-_56065593	48237	-	AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC056882|CUEDC1|404093|CUE domain containing 1##D28118|VEZF1|7716|vascular endothelial zinc finger 1	0.011648	
chr20	44687071	44687252	reg1035290.p2	4.047	+	TSC_hg19_v1_chr20_+_44657861 AK289758 AK296331 AK294059 BC132668 BC132670 AK295096 AF208159 AB033002	-29230	+	TSC_hg19_v1_chr20_+_44657824 NM_020708 AK098371	-29338	+	TSC_hg19_v1_chr20_+_44650321 NM_001134771	-36841	+	TSC_hg19_v1_chr20_-_44718529 BC056872	31363	-	TSC_hg19_v1_chr20_-_44718561 AF230533	31392	-	TSC_hg19_v1_chr20_-_44718581 NM_020967	31450	-	AK289758|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK296331|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK294059|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC132668|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC132670|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK295096|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AF208159|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AB033002|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##NM_020708|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##AK098371|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##NM_001134771|SLC12A5|57468|solute carrier family 12 (potassium/chloride transporter), member 5##BC056872|NCOA5|57727|nuclear receptor coactivator 5##AF230533|NCOA5|57727|nuclear receptor coactivator 5##NM_020967|NCOA5|57727|nuclear receptor coactivator 5	0.0	
chr22	46646331	46646411	reg1031134.p2	4.047	+	TSC_hg19_v1_chr22_+_46646292 AK091355	-70	+	TSC_hg19_v1_chr22_-_46646191 BC036462 BC067871 NM_207327 BX648331	-163	-	TSC_hg19_v1_chr22_+_46546708 AK289821	-99661	+	AF116458 NM_006071 BC027601	12863	-	TSC_hg19_v1_chr22_+_46663880 NM_017931 AK300606	17487	+	TSC_hg19_v1_chr22_+_46663916 AK000706 BC018918 CU676334	17544	+	AK091355|LOC284926|284926|uncharacterized LOC284926##BC036462|C22orf40|150383|chromosome 22 open reading frame 40##BC067871|C22orf40|150383|chromosome 22 open reading frame 40##NM_207327|C22orf40|150383|chromosome 22 open reading frame 40##BX648331|C22orf40|150383|chromosome 22 open reading frame 40##AK289821|PPARA|5465|peroxisome proliferator-activated receptor alpha##AF116458|PKDREJ|10343|polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)##NM_006071|PKDREJ|10343|polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)##BC027601|PKDREJ|10343|polycystic kidney disease (polycystin) and REJ homolog (sperm receptor for egg jelly homolog, sea urchin)##NM_017931|TTC38|55020|tetratricopeptide repeat domain 38##AK300606|TTC38|55020|tetratricopeptide repeat domain 38##AK000706|TTC38|55020|tetratricopeptide repeat domain 38##BC018918|TTC38|55020|tetratricopeptide repeat domain 38	0.0	
chr2	25496305	25496485	reg1030899.p1	4.047	+	TSC_hg19_v1_chr2_-_25475127 AF480163 NM_153759	-21189	-	TSC_hg19_v1_chr2_-_25468920 AK025230	-27417	-	TSC_hg19_v1_chr2_-_25467080 BC023612	-29260	-	TSC_hg19_v1_chr2_-_25536762 AB527956 EU446951	40412	-	AF067972 TSC_hg19_v1_chr2_-_25564801 BC043617 NM_022552	68404	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	68933	-	AF480163|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_153759|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##EU446951|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF067972|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC043617|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_022552|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.033982	
chr2	74054262	74054356	reg1032062.p1	4.047	+	AK125975 NM_001080474	-42994	+	CU674166 DQ891356 DQ894537 TSC_hg19_v1_chr2_-_74007231 BC000346 AF023917 AK315271 CR627368 NM_003584	-47116	-	TSC_hg19_v1_chr2_-_73964473 AK291071 AF060921 AK097254 AY643713 BC029492 AK295239 AF151879 NM_016058	-89838	-	NM_201647 TSC_hg19_v1_chr2_+_74056093	1759	+	TSC_hg19_v1_chr2_+_74056109 NM_006463 NM_213622 BC065574	1825	+	BC007682 U73522 CU675757 CU688078 DQ892616 DQ895856 EU927390 TSC_hg19_v1_chr2_+_74058055	3703	+	AK125975|C2orf78|388960|chromosome 2 open reading frame 78##NM_001080474|C2orf78|388960|chromosome 2 open reading frame 78##DQ891356|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##DQ894537|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##BC000346|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AF023917|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AK315271|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##CR627368|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##NM_003584|DUSP11|8446|dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)##AK291071|TPRKB|51002|TP53RK binding protein##AF060921|TPRKB|51002|TP53RK binding protein##AK097254|TPRKB|51002|TP53RK binding protein##AY643713|TPRKB|51002|TP53RK binding protein##BC029492|TPRKB|51002|TP53RK binding protein##AK295239|TPRKB|51002|TP53RK binding protein##AF151879|TPRKB|51002|TP53RK binding protein##NM_016058|TPRKB|51002|TP53RK binding protein##NM_201647|STAMBP|10617|STAM binding protein##NM_006463|STAMBP|10617|STAM binding protein##NM_213622|STAMBP|10617|STAM binding protein##BC065574|STAMBP|10617|STAM binding protein##BC007682|STAMBP|10617|STAM binding protein##U73522|STAMBP|10617|STAM binding protein##DQ892616|STAMBP|10617|STAM binding protein##DQ895856|STAMBP|10617|STAM binding protein##EU927390|STAMBP|10617|STAM binding protein	0.186099	
chr5	143028428	143028547	reg1040870.p1	4.047	+	NM_001018074 NM_001018075 NM_001018077	-213411	-	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-244321	-	TSC_hg19_v1_chr5_-_142784036 AK302050 NM_001018076	-244455	-	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	163271	+	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	521648	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	521689	-	NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5	0.413689	CTCF.p2:-13:0.414
chr5	67581861	67581954	reg1007940.p1	4.047	+	TSC_hg19_v1_chr5_+_67511602 BC094795	-70300	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	-70327	+	BC109069 BC109070 D83597 NM_005582 AK313177	-1089307	-	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	2387	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	4639	+	AK094785 NM_001242466 AK294919	6545	+	BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.047805	
chr8	125385235	125385416	reg1010194.p2	4.047	+	TSC_hg19_v1_chr8_-_125384925 BC041379 NM_194291	-373	-	BC101502 BC101506 AK057332 TSC_hg19_v1_chr8_-_125183771	-201587	-	AB196633 NM_001039112	-521099	+	TSC_hg19_v1_chr8_+_125463060 NM_017956 AK225083 AK000779 AK222727 BC011713 BC003057	77747	+	TSC_hg19_v1_chr8_-_125486793 CR933665	101452	-	TSC_hg19_v1_chr8_-_125486808 AK075052	101506	-	BC041379|TMEM65|157378|transmembrane protein 65##NM_194291|TMEM65|157378|transmembrane protein 65##BC101502|C8orf78|157376|chromosome 8 open reading frame 78##BC101506|C8orf78|157376|chromosome 8 open reading frame 78##AK057332|C8orf78|157376|chromosome 8 open reading frame 78##AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_017956|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK225083|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK000779|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK222727|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC011713|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC003057|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)	0.0	
chr8	27221628	27221703	reg1023728.p2	4.047	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-38588	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-38613	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-38648	+	AK314787 U62431 NM_000742	115106	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	126993	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	250540	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	0.046958	
chrX	135790640	135790735	reg1033862.p2	4.047	+	AK129909 TSC_hg19_v1_chrX_-_135749484	-41221	-	BC071754 NM_000074 AK292637 X68550 X67878 L07414 BC074950 X96710 Z15017 FN298241 CU687160 AB590912 AF529195 AY197739	-60316	+	BC000045 NM_016267 AK309912 BC003362 AF137387	-176320	+	AK294929 TSC_hg19_v1_chrX_-_135849503 AK295709 AK299861	58820	-	D25304 TSC_hg19_v1_chrX_-_135863046 AK291742	72366	-	TSC_hg19_v1_chrX_-_135863105 BX537390	72422	-	AK129909|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##BC071754|CD40LG|959|CD40 ligand##NM_000074|CD40LG|959|CD40 ligand##AK292637|CD40LG|959|CD40 ligand##X68550|CD40LG|959|CD40 ligand##X67878|CD40LG|959|CD40 ligand##L07414|CD40LG|959|CD40 ligand##BC074950|CD40LG|959|CD40 ligand##Z15017|CD40LG|959|CD40 ligand##FN298241|CD40LG|959|CD40 ligand##AF529195|CD40LG|959|CD40 ligand##AY197739|CD40LG|959|CD40 ligand##BC000045|VGLL1|51442|vestigial like 1 (Drosophila)##NM_016267|VGLL1|51442|vestigial like 1 (Drosophila)##AK309912|VGLL1|51442|vestigial like 1 (Drosophila)##BC003362|VGLL1|51442|vestigial like 1 (Drosophila)##AF137387|VGLL1|51442|vestigial like 1 (Drosophila)##AK294929|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK295709|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK299861|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##D25304|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK291742|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##BX537390|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	0.0	
chr10	6459116	6459209	reg1012402.p2	4.046	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-214286	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-272250	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-272278	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	163099	-	TSC_hg19_v1_chr10_+_6622460 AY007155	163318	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	992088	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.0	
chr1	109583032	109583134	reg1032783.p1	4.046	+	TSC_hg19_v1_chr1_-_109506107 AK090563 AX746511 BC002939 AK293786 NM_001048210 NM_015127	-77006	-	TSC_hg19_v1_chr1_+_109419783 AK295563 BC027732	-163296	+	TSC_hg19_v1_chr1_+_109419606 AB445462 NM_013296 AK314249	-163472	+	TSC_hg19_v1_chr1_-_109584725 AK225781 AB020700 AK289789 BC039254 BC034964 NM_001142550 NM_001142551 NM_014969	1636	-	AB587451 TSC_hg19_v1_chr1_-_109618626 X84003 BC017821 BC121180 BC121181 AK312158 NM_005645	35518	-	BC066918 AK075191 TSC_hg19_v1_chr1_+_109633380 AF164793 AK310192 BC008739 BC065186 NM_020141 AK291293 BC067116	50311	+	AK090563|CLCC1|23155|chloride channel CLIC-like 1##BC002939|CLCC1|23155|chloride channel CLIC-like 1##AK293786|AKNAD1|254268|AKNA domain containing 1##NM_001048210|CLCC1|23155|chloride channel CLIC-like 1##NM_015127|CLCC1|23155|chloride channel CLIC-like 1##AK295563|GPSM2|29899|G-protein signaling modulator 2##BC027732|GPSM2|29899|G-protein signaling modulator 2##AB445462|GPSM2|29899|G-protein signaling modulator 2##NM_013296|GPSM2|29899|G-protein signaling modulator 2##AK314249|GPSM2|29899|G-protein signaling modulator 2##AK225781|WDR47|22911|WD repeat domain 47##AB020700|WDR47|22911|WD repeat domain 47##AK289789|WDR47|22911|WD repeat domain 47##BC039254|WDR47|22911|WD repeat domain 47##BC034964|WDR47|22911|WD repeat domain 47##NM_001142550|WDR47|22911|WD repeat domain 47##NM_001142551|WDR47|22911|WD repeat domain 47##NM_014969|WDR47|22911|WD repeat domain 47##X84003|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC121180|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC121181|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##AK312158|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##NM_005645|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC066918|TMEM167B|56900|transmembrane protein 167B##AK075191|TMEM167B|56900|transmembrane protein 167B##AF164793|TMEM167B|56900|transmembrane protein 167B##AK310192|TMEM167B|56900|transmembrane protein 167B##BC008739|TMEM167B|56900|transmembrane protein 167B##BC065186|TMEM167B|56900|transmembrane protein 167B##NM_020141|TMEM167B|56900|transmembrane protein 167B##AK291293|TMEM167B|56900|transmembrane protein 167B##BC067116|TMEM167B|56900|transmembrane protein 167B	0.0	
chr11	327119	327238	reg1030446.p1	4.046	+	TSC_hg19_v1_chr11_-_320925 X57352	-6191	-	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	-6334	-	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	-13167	+	TSC_hg19_v1_chr11_+_369724 NM_178537 AB089939 BC131528	42587	+	TSC_hg19_v1_chr11_+_394208 BC000081 NM_007183 AK025067 AK223511 Z98265	67034	+	AF053719 TSC_hg19_v1_chr11_+_394242 DQ891692 DQ894875 CU674026	67086	+	X57352|IFITM3|10410|interferon induced transmembrane protein 3##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3##J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_178537|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##AB089939|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC131528|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC000081|PKP3|11187|plakophilin 3##NM_007183|PKP3|11187|plakophilin 3##AK025067|PKP3|11187|plakophilin 3##AK223511|PKP3|11187|plakophilin 3##Z98265|PKP3|11187|plakophilin 3##AF053719|PKP3|11187|plakophilin 3##DQ891692|PKP3|11187|plakophilin 3##DQ894875|PKP3|11187|plakophilin 3	0.0	
chr12	32049759	32049908	reg1024397.p2	4.046	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	-104629	-	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	-167777	-	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	-167859	-	TSC_hg19_v1_chr12_+_32112348 NM_018169	62498	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	62561	+	TSC_hg19_v1_chr12_+_32259750 BC010091	209881	+	BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)	0.0	
chr1	236332536	236332671	reg1031719.p1	4.046	+	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	-26727	+	TSC_hg19_v1_chr1_-_236228670 BC012501	-103863	-	TSC_hg19_v1_chr1_-_236228496 AK297234	-104105	-	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	112585	-	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	112713	-	AK290862 AY028913 NM_145861 BC106873 BC106874 BC114557 BC114560 BC128082	225080	+	BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##BC012501|NID1|4811|nidogen 1##AK297234|NID1|4811|nidogen 1##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK290862|EDARADD|128178|EDAR-associated death domain##AY028913|EDARADD|128178|EDAR-associated death domain##NM_145861|EDARADD|128178|EDAR-associated death domain##BC114557|EDARADD|128178|EDAR-associated death domain##BC114560|EDARADD|128178|EDAR-associated death domain##BC128082|EDARADD|128178|EDAR-associated death domain	0.996998	CTCF.p2:-13:0.997
chr13	109814627	109814749	reg1033424.p1	4.046	+	AB290159 AK127806 NM_001198950	-533119	+	AB020672 BC146791 NM_015011 AL834447	-566174	+	DQ857728 TSC_hg19_v1_chr13_+_108955871	-858871	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	624220	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	988047	-	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	1144821	-	AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1	0.754314	CTCF.p2:-35:0.641
chr16	82665702	82665806	reg1031794.p1	4.046	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-5085	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	-5165	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	-5360	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	1175846	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	1175902	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	1267015	+	AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase	0.689118	CTCF.p2:-10:0.689
chr2	231466527	231466593	reg1019383.p2	4.046	+	AK091898 NM_001206704	-185090	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-185604	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-185641	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	110986	+	TSC_hg19_v1_chr2_+_231577633 BC020570	111084	+	AK292382 NM_001130849 NM_001130850 AK315692	111718	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.0	
chr6	21019962	21020089	reg1033427.p1	4.046	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-485302	+	CR749285 NM_001243076	-615992	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-617922	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	574347	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	646634	+	BC015850 NM_000948	1277704	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.0	
chr9	19103074	19103255	reg1031887.p2	4.046	+	TSC_hg19_v1_chr9_-_19102926 AF533709	-155	-	AL832495 BC026178 TSC_hg19_v1_chr9_-_19102903 AF537091 AK056458 NM_017645	-263	-	AB527315 AM393468 BC113981 BC114492 TSC_hg19_v1_chr9_-_19102891	-394	-	TSC_hg19_v1_chr9_-_19127491 BC005127 AK296125 AK312983	24313	-	TSC_hg19_v1_chr9_-_19127517 AK297920 NM_001122	24384	-	NM_017925 BC144484 BC144485	187587	+	AF533709|HAUS6|54801|HAUS augmin-like complex, subunit 6##AL832495|HAUS6|54801|HAUS augmin-like complex, subunit 6##BC026178|HAUS6|54801|HAUS augmin-like complex, subunit 6##AF537091|HAUS6|54801|HAUS augmin-like complex, subunit 6##AK056458|HAUS6|54801|HAUS augmin-like complex, subunit 6##NM_017645|HAUS6|54801|HAUS augmin-like complex, subunit 6##AM393468|HAUS6|54801|HAUS augmin-like complex, subunit 6##BC113981|HAUS6|54801|HAUS augmin-like complex, subunit 6##BC114492|HAUS6|54801|HAUS augmin-like complex, subunit 6##BC005127|PLIN2|123|perilipin 2##AK296125|PLIN2|123|perilipin 2##AK312983|PLIN2|123|perilipin 2##AK297920|PLIN2|123|perilipin 2##NM_001122|PLIN2|123|perilipin 2##NM_017925|DENND4C|55667|DENN/MADD domain containing 4C##BC144484|DENND4C|55667|DENN/MADD domain containing 4C##BC144485|DENND4C|55667|DENN/MADD domain containing 4C	0.0	
chr10	82778915	82779020	reg1016775.p1	4.045	+	AK123978 NM_001145719	-478393	+	AK123885 NM_207372	-481310	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-564863	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	856115	+	DQ857894 NM_001165973	858475	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3120290	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.0	
chr19	1383392	1383573	reg1028309.p1	4.045	+	TSC_hg19_v1_chr19_+_1354979 NM_032853 AK310721 U20897	-28481	+	TSC_hg19_v1_chr19_+_1286081 AJ007292 NM_001405 AB463609	-97517	+	TSC_hg19_v1_chr19_+_1275540 NM_017914 BC000890 BC012080	-107915	+	TSC_hg19_v1_chr19_+_1383882 AK092169 AX747389 NM_024407 AK128713	404	+	AK293917 AK297611 TSC_hg19_v1_chr19_+_1383902 AF115969 AK091623 AK127759 AX747100	418	+	TSC_hg19_v1_chr19_+_1383905 AK222738 BC005954 AF060512	428	+	NM_032853|MUM1|84939|melanoma associated antigen (mutated) 1##AK310721|MUM1|84939|melanoma associated antigen (mutated) 1##U20897|MUM1|84939|melanoma associated antigen (mutated) 1##AJ007292|EFNA2|1943|ephrin-A2##NM_001405|EFNA2|1943|ephrin-A2##NM_017914|C19orf24|55009|chromosome 19 open reading frame 24##BC000890|C19orf24|55009|chromosome 19 open reading frame 24##BC012080|C19orf24|55009|chromosome 19 open reading frame 24##AK092169|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##NM_024407|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK128713|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK293917|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AF115969|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK091623|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK127759|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK222738|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##BC005954|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AF060512|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)	0.0	
chr19	43434548	43434729	reg1018721.p2	4.045	+	CU676604 DQ893114 DQ896388 M31125 M33666 NM_002782 X17098 BC020652 NM_001031850	-12645	-	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	-50813	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	-164814	-	BC136401 U18467 BC030979 AK309898 NM_001206650 NM_002783	6651	-	CU676656 M69245 U25988 BC020711 NM_001113410 NM_002785 NM_203287	95948	-	DQ891359 EU832659 EU832736 M20882 AK002132 BC022316 NM_031246	152169	-	DQ893114|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##DQ896388|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M31125|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M33666|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_002782|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##X17098|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC020652|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_001031850|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC136401|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##U18467|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##BC030979|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_001206650|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_002783|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##M69245|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##U25988|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##BC020711|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_001113410|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_002785|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_203287|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##DQ891359|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832659|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832736|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M20882|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##BC022316|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##NM_031246|PSG2|5670|pregnancy specific beta-1-glycoprotein 2	0.292943	CTCF.p2:-8:0.293
chr20	48295561	48295629	reg1032429.p1	4.045	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	-110906	-	BC110572 BC110573 NM_004975	-196416	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-400400	+	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	34635	-	AB004550 TSC_hg19_v1_chr20_-_48330359	34761	-	TSC_hg19_v1_chr20_-_48330471 NM_004776	34871	-	AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.0	
chr6	14877410	14877547	reg1031326.p1	4.045	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-759456	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-759573	+	NM_001251901	-759992	+	TSC_hg19_v1_chr6_+_15245702 AK302624	368239	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	368934	+	BC033996 TSC_hg19_v1_chr6_-_15248900	371423	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.0	
chr11	120099879	120100001	reg1000609.p1	4.044	+	TSC_hg19_v1_chr11_+_120081739 BC047726 NM_178507 BC008339	-18227	+	TSC_hg19_v1_chr11_-_120008858 AF230388 AF230389 L24203 NM_012101	-91085	-	BC017352 BC010644 TSC_hg19_v1_chr11_-_120008822 AK223090 AK122720	-91128	-	AK302212 NM_001244682	7408	+	AK291993 NM_014352 AF162278 BC101649 BC143593 BC143594 BC143595 AF133895 AJ012214 EU446698	11037	+	AK128040 NM_001198670 NM_001198671 NM_001198672 NM_001198673 NM_001198674 NM_001198675 NM_174926	95897	+	BC047726|OAF|220323|OAF homolog (Drosophila)##NM_178507|OAF|220323|OAF homolog (Drosophila)##BC008339|OAF|220323|OAF homolog (Drosophila)##AF230388|TRIM29|23650|tripartite motif containing 29##AF230389|TRIM29|23650|tripartite motif containing 29##L24203|TRIM29|23650|tripartite motif containing 29##NM_012101|TRIM29|23650|tripartite motif containing 29##BC017352|TRIM29|23650|tripartite motif containing 29##BC010644|TRIM29|23650|tripartite motif containing 29##AK223090|TRIM29|23650|tripartite motif containing 29##AK122720|TRIM29|23650|tripartite motif containing 29##AK302212|POU2F3|25833|POU class 2 homeobox 3##NM_001244682|POU2F3|25833|POU class 2 homeobox 3##AK291993|POU2F3|25833|POU class 2 homeobox 3##NM_014352|POU2F3|25833|POU class 2 homeobox 3##AF162278|POU2F3|25833|POU class 2 homeobox 3##BC101649|POU2F3|25833|POU class 2 homeobox 3##BC143593|POU2F3|25833|POU class 2 homeobox 3##BC143594|POU2F3|25833|POU class 2 homeobox 3##BC143595|POU2F3|25833|POU class 2 homeobox 3##AF133895|POU2F3|25833|POU class 2 homeobox 3##AJ012214|POU2F3|25833|POU class 2 homeobox 3##EU446698|POU2F3|25833|POU class 2 homeobox 3##AK128040|TMEM136|219902|transmembrane protein 136##NM_001198670|TMEM136|219902|transmembrane protein 136##NM_001198671|TMEM136|219902|transmembrane protein 136##NM_001198672|TMEM136|219902|transmembrane protein 136##NM_001198673|TMEM136|219902|transmembrane protein 136##NM_001198674|TMEM136|219902|transmembrane protein 136##NM_001198675|TMEM136|219902|transmembrane protein 136##NM_174926|TMEM136|219902|transmembrane protein 136	0.049051	
chr1	205282955	205283077	reg1032603.p1	4.044	+	AY358192 TSC_hg19_v1_chr1_+_205236667	-46382	+	AK293734 NM_001242925	-84958	+	TSC_hg19_v1_chr1_+_205197073 AB007950 NM_014858 AK131419	-85933	+	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	7827	-	BC036076 TSC_hg19_v1_chr1_-_205313311	30294	-	AK299227 AK001610 NM_018203 AK096590	43024	-	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK293734|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_001242925|TMCC2|9911|transmembrane and coiled-coil domain family 2##AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2##AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC036076|KLHDC8A|55220|kelch domain containing 8A##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A	0.0	
chr15	93237396	93237507	reg1026496.p2	4.044	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	-38572	-	AK057393 NM_153040	-222545	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	-300252	+	BC110328 TSC_hg19_v1_chr15_-_93277463	39938	-	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	206035	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	206129	+	BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC110328|FAM174B|400451|family with sequence similarity 174, member B##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2	0.971084	CTCF.p2:-18:0.971
chr16	12706566	12706662	reg1023909.p1	4.044	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-636041	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-647530	+	NM_001130007	-696096	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	191037	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	191105	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	288854	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr16	67194081	67194239	reg1029220.p2	4.044	+	TSC_hg19_v1_chr16_+_67193861 AK002140 BC014414 NM_018378	-293	+	TSC_hg19_v1_chr16_-_67193813 NM_003789	-342	-	TSC_hg19_v1_chr16_-_67193791 L41690 BC004491 AK301593	-378	-	NM_001040667 NM_001538	3127	+	AK293631 TSC_hg19_v1_chr16_+_67198611	4437	+	TSC_hg19_v1_chr16_+_67198637 BC130383	4482	+	AK002140|FBXL8|55336|F-box and leucine-rich repeat protein 8##BC014414|FBXL8|55336|F-box and leucine-rich repeat protein 8##NM_018378|FBXL8|55336|F-box and leucine-rich repeat protein 8##NM_003789|TRADD|8717|TNFRSF1A-associated via death domain##L41690|TRADD|8717|TNFRSF1A-associated via death domain##BC004491|TRADD|8717|TNFRSF1A-associated via death domain##AK301593|TRADD|8717|TNFRSF1A-associated via death domain##NM_001040667|HSF4|3299|heat shock transcription factor 4##NM_001538|HSF4|3299|heat shock transcription factor 4##AK293631|HSF4|3299|heat shock transcription factor 4##BC130383|HSF4|3299|heat shock transcription factor 4	1.001573	CTCF.p2:-74:0.970
chr19	4109216	4109319	reg1029050.p2	4.044	+	TSC_hg19_v1_chr19_-_4103205 AK093125	-6055	-	BC113511 TSC_hg19_v1_chr19_-_4066828 AF000561 NM_015898 BC064505	-42450	-	TSC_hg19_v1_chr19_-_4065504 BC084568	-43771	-	AB463893 DQ893601 DQ895060 L11285 BC018645 TSC_hg19_v1_chr19_-_4124114 BX538081	14725	-	TSC_hg19_v1_chr19_-_4124145 BC000471 NM_030662	14866	-	TSC_hg19_v1_chr19_+_4153636 AK313099 AB050902 AK172839 NM_032607 AB073612 BC101504 BC143609 BC143610 BC101508 EU446882	44400	+	AK093125|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BC113511|ZBTB7A|51341|zinc finger and BTB domain containing 7A##AF000561|ZBTB7A|51341|zinc finger and BTB domain containing 7A##NM_015898|ZBTB7A|51341|zinc finger and BTB domain containing 7A##BC084568|ZBTB7A|51341|zinc finger and BTB domain containing 7A##DQ893601|MAP2K2|5605|mitogen-activated protein kinase kinase 2##DQ895060|MAP2K2|5605|mitogen-activated protein kinase kinase 2##L11285|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BC018645|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BX538081|MAP2K2|5605|mitogen-activated protein kinase kinase 2##BC000471|MAP2K2|5605|mitogen-activated protein kinase kinase 2##NM_030662|MAP2K2|5605|mitogen-activated protein kinase kinase 2##AK313099|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB050902|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AK172839|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##NM_032607|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##AB073612|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101504|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143609|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC143610|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##BC101508|CREB3L3|84699|cAMP responsive element binding protein 3-like 3##EU446882|CREB3L3|84699|cAMP responsive element binding protein 3-like 3	0.0	
chr19	43692345	43692430	reg1033859.p1	4.044	+	AB527988 EU831982 EU832075 M73713 M25384 BC012607 NM_001130014 NM_002781	-1765	-	DQ891359 EU832659 EU832736 M20882 AK002132 BC022316 NM_031246	-105580	-	CU676656 M69245 U25988 BC020711 NM_001113410 NM_002785 NM_203287	-161801	-	U18468 U18469 M94891 X17097 BC008405 BC013431 BC063127 NM_002780 NM_213633 AK075149	17368	-	CR407605 CU676704 DQ891385 DQ894561 U25987 M34481 M94890 M58591 M34421 X17610 AK300187 AK300229 BC005925 BC020759 AK313256 NM_002784	81244	-	NM_020406 AF146747 AK290965 TSC_hg19_v1_chr19_+_43857837 AJ290452 AJ310433 AK225226 AM884905 BC029167 AY358932 AB237911 AB527936 CU688610 DQ892045 DQ895239 AJ305326 BT020111	165458	+	EU831982|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##EU832075|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M73713|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M25384|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##BC012607|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_001130014|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_002781|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##DQ891359|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832659|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832736|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M20882|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##BC022316|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##NM_031246|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M69245|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##U25988|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##BC020711|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_001113410|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_002785|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_203287|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##U18468|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##U18469|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##M94891|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##X17097|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC013431|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##BC063127|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##NM_002780|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##NM_213633|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK075149|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##CR407605|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##DQ891385|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##DQ894561|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##U25987|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M34481|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M94890|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M58591|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##M34421|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##X17610|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK300187|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK300229|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##BC005925|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##BC020759|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##AK313256|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##NM_002784|PSG9|5678|pregnancy specific beta-1-glycoprotein 9##NM_020406|CD177|57126|CD177 molecule##AF146747|CD177|57126|CD177 molecule##AK290965|CD177|57126|CD177 molecule##AJ290452|CD177|57126|CD177 molecule##AJ310433|CD177|57126|CD177 molecule##AK225226|CD177|57126|CD177 molecule##AM884905|CD177|57126|CD177 molecule##BC029167|CD177|57126|CD177 molecule##AY358932|CD177|57126|CD177 molecule##AB237911|CD177|57126|CD177 molecule##DQ892045|CD177|57126|CD177 molecule##DQ895239|CD177|57126|CD177 molecule##AJ305326|CD177|57126|CD177 molecule##BT020111|CD177|57126|CD177 molecule	0.656206	CTCF.p2:-7:0.656
chr21	38639961	38640029	reg1027406.p1	4.044	+	TSC_hg19_v1_chr21_-_38639642 AJ001867 AK300024 AK312707 D87343 NM_006052 AK303624	-167	-	TSC_hg19_v1_chr21_-_38639617 AK316460 AK299662	-387	-	BC029827 TSC_hg19_v1_chr21_+_38593064	-46936	+	TSC_hg19_v1_chr21_-_38640233 BX648191 BC110655	240	-	TSC_hg19_v1_chr21_+_38739208 AB015282	99251	+	AF108830 NM_101395 AB015283 AB015284	99875	+	AJ001867|DSCR3|10311|Down syndrome critical region gene 3##AK300024|DSCR3|10311|Down syndrome critical region gene 3##AK312707|DSCR3|10311|Down syndrome critical region gene 3##D87343|DSCR3|10311|Down syndrome critical region gene 3##NM_006052|DSCR3|10311|Down syndrome critical region gene 3##AK303624|DSCR3|10311|Down syndrome critical region gene 3##AK316460|DSCR3|10311|Down syndrome critical region gene 3##AK299662|DSCR3|10311|Down syndrome critical region gene 3##BC029827|DSCR9|257203|Down syndrome critical region gene 9 (non-protein coding)##BX648191|DSCR3|10311|Down syndrome critical region gene 3##BC110655|DSCR3|10311|Down syndrome critical region gene 3##AB015282|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	0.0	
chr2	7914080	7914170	reg1029500.p2	4.044	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-856538	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-896262	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-907422	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	908078	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1063594	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1229696	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr3	85392207	85392306	reg1035653.p1	4.044	+	TSC_hg19_v1_chr3_+_85008139 AB646739 BC105999 NM_001167674 NM_001167675 AK295885 BC063484 AL834270	-384127	+	BC031255 TSC_hg19_v1_chr3_+_82035308	-3356954	+	TSC_hg19_v1_chr3_-_81810971 NM_000158	-3581314	-	AF538973 NM_153184	383375	+	TSC_hg19_v1_chr3_-_87040249 NM_016206	1647995	-	BC094780 TSC_hg19_v1_chr3_-_87040272	1648014	-	AB646739|CADM2|253559|cell adhesion molecule 2##BC105999|CADM2|253559|cell adhesion molecule 2##NM_001167674|CADM2|253559|cell adhesion molecule 2##NM_001167675|CADM2|253559|cell adhesion molecule 2##AK295885|CADM2|253559|cell adhesion molecule 2##AL834270|CADM2|253559|cell adhesion molecule 2##NM_000158|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AF538973|CADM2|253559|cell adhesion molecule 2##NM_153184|CADM2|253559|cell adhesion molecule 2##NM_016206|VGLL3|389136|vestigial like 3 (Drosophila)##BC094780|VGLL3|389136|vestigial like 3 (Drosophila)	0.90823	CTCF.p2:15:0.908
chr4	121730790	121730915	reg1035891.p1	4.044	+	EU831987 EU832080 AB528692 AF394735 TSC_hg19_v1_chr4_-_120987954 U65410 BC070283 AJ000186 BC005945 BC000356 U31278 AK223433 AK313827 AK298228 NM_002358	-742898	-	D89094 TSC_hg19_v1_chr4_-_120550167	-1180690	-	AB527373 AM393036 AM393270 AM393448 AK290189 BC126233 AJ004865 AF155192 TSC_hg19_v1_chr4_-_120549960 AF043731 NM_001083	-1180949	-	TSC_hg19_v1_chr4_-_121843992 AB464059 BC121037 BC121038 AK314293 AK310958 AF272897 AK056352 NM_018699 BC066942	113143	-	BC019351 AK289615 NM_024574 TSC_hg19_v1_chr4_-_121993690	262778	-	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	354632	-	EU831987|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##EU832080|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF394735|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC070283|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AJ000186|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC005945|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC000356|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK223433|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK313827|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK298228|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##NM_002358|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC121037|PRDM5|11107|PR domain containing 5##BC121038|PRDM5|11107|PR domain containing 5##AK314293|PRDM5|11107|PR domain containing 5##AK310958|PRDM5|11107|PR domain containing 5##AF272897|PRDM5|11107|PR domain containing 5##AK056352|PRDM5|11107|PR domain containing 5##NM_018699|PRDM5|11107|PR domain containing 5##BC066942|PRDM5|11107|PR domain containing 5##BC019351|NDNF|79625|neuron-derived neurotrophic factor##AK289615|NDNF|79625|neuron-derived neurotrophic factor##NM_024574|NDNF|79625|neuron-derived neurotrophic factor##AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3	0.315518	CTCF.p2:-11:0.316
chr5	176831214	176831327	reg1007277.p2	4.044	+	TSC_hg19_v1_chr5_-_176831183 BT007350	-45	-	BC132952 BC132954 NM_001029886	-3634	-	AK096088 NM_001167579 NM_003052 TSC_hg19_v1_chr5_+_176811434 AK298299 BC053349 BC035294 BC050385 L13258	-19828	+	BC012390 TSC_hg19_v1_chr5_-_176831506	190	-	M11723 M31315 TSC_hg19_v1_chr5_-_176836522	5235	-	TSC_hg19_v1_chr5_-_176836552 AB095845 NM_000505	5285	-	BT007350|F12|2161|coagulation factor XII (Hageman factor)##BC132952|PFN3|345456|profilin 3##BC132954|PFN3|345456|profilin 3##NM_001029886|PFN3|345456|profilin 3##AK096088|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_001167579|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_003052|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK298299|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC053349|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC035294|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC050385|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##L13258|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC012390|F12|2161|coagulation factor XII (Hageman factor)##M11723|F12|2161|coagulation factor XII (Hageman factor)##M31315|F12|2161|coagulation factor XII (Hageman factor)##AB095845|F12|2161|coagulation factor XII (Hageman factor)##NM_000505|F12|2161|coagulation factor XII (Hageman factor)	0.0	
chr6_dbb_hap3	1803031	1803097	reg1035615.p1	4.044	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.95208	CTCF.p2:-22:0.952
chr7	51209248	51209345	reg1035456.p1	4.044	+	TSC_hg19_v1_chr7_-_50861150 NM_001001555	-348142	-	D86962 TSC_hg19_v1_chr7_-_50860699	-348607	-	AF000017 AB000731 AF001534 NM_001001549 NM_005311 U34355	-409263	-	AB385366 TSC_hg19_v1_chr7_-_51384416 BC136441 BC144099	175084	-	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	175190	-	NM_182595	1894052	+	NM_001001555|GRB10|2887|growth factor receptor-bound protein 10##D86962|GRB10|2887|growth factor receptor-bound protein 10##AF000017|GRB10|2887|growth factor receptor-bound protein 10##AB000731|GRB10|2887|growth factor receptor-bound protein 10##AF001534|GRB10|2887|growth factor receptor-bound protein 10##NM_001001549|GRB10|2887|growth factor receptor-bound protein 10##NM_005311|GRB10|2887|growth factor receptor-bound protein 10##U34355|GRB10|2887|growth factor receptor-bound protein 10##BC136441|COBL|23242|cordon-bleu homolog (mouse)##BC144099|COBL|23242|cordon-bleu homolog (mouse)##BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12	0.211888	CTCF.p2:15:0.212
chr1	156542389	156542524	reg1032717.p1	4.043	+	AY253300 TSC_hg19_v1_chr1_-_156542352 AB105103 BC131536 BC033549 NM_178229	-94	-	AK310187 TSC_hg19_v1_chr1_-_156470568	-71888	-	TSC_hg19_v1_chr1_-_156470563 BC018985 BC032479 AB210005 BC064988	-71906	-	NM_001105669	7062	+	TSC_hg19_v1_chr1_+_156561567 AK294835 AK298222 BC056917 NM_144772 AJ315849 BC100931 BC100932 BC100933 BC100934	19099	+	TSC_hg19_v1_chr1_+_156561594 AK316083	19146	+	AY253300|IQGAP3|128239|IQ motif containing GTPase activating protein 3##AB105103|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC131536|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC033549|IQGAP3|128239|IQ motif containing GTPase activating protein 3##NM_178229|IQGAP3|128239|IQ motif containing GTPase activating protein 3##AK310187|MEF2D|4209|myocyte enhancer factor 2D##BC018985|MEF2D|4209|myocyte enhancer factor 2D##BC032479|MEF2D|4209|myocyte enhancer factor 2D##AB210005|MEF2D|4209|myocyte enhancer factor 2D##NM_001105669|TTC24|164118|tetratricopeptide repeat domain 24##AK294835|APOA1BP|128240|apolipoprotein A-I binding protein##AK298222|APOA1BP|128240|apolipoprotein A-I binding protein##BC056917|APOA1BP|128240|apolipoprotein A-I binding protein##NM_144772|APOA1BP|128240|apolipoprotein A-I binding protein##AJ315849|APOA1BP|128240|apolipoprotein A-I binding protein##BC100931|APOA1BP|128240|apolipoprotein A-I binding protein##BC100932|APOA1BP|128240|apolipoprotein A-I binding protein##BC100933|APOA1BP|128240|apolipoprotein A-I binding protein##BC100934|APOA1BP|128240|apolipoprotein A-I binding protein	0.0	
chr12	129677959	129678067	reg1034143.p1	4.043	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	-339926	+	BC043528 TSC_hg19_v1_chr12_+_129337985	-340029	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	-369570	-	BC114626 BC114936 NM_133448 AB061814	710198	-	AK056047 TSC_hg19_v1_chr12_-_130646911	968843	-	TSC_hg19_v1_chr12_+_130647008 BC070037 NM_007197	968997	+	AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D##AK056047|FLJ31485|440119|uncharacterized LOC440119##BC070037|FZD10|11211|frizzled family receptor 10##NM_007197|FZD10|11211|frizzled family receptor 10	0.994147	CTCF.p2:2:0.994
chr12	788187	788367	reg1035172.p1	4.043	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-15562	-	TSC_hg19_v1_chr12_-_752800 AK298043	-35458	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-36099	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	73879	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	74479	+	BC013629 TSC_hg19_v1_chr12_+_1017145	228805	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr12	96357026	96357139	reg1030265.p1	4.043	+	AK054617 NM_152435 TSC_hg19_v1_chr12_+_96337118 AK122802 AB075878 AK290828 BC029146	-19980	+	BC030712 BC095479 BC047659 AK097408 NM_182496	-20682	-	TSC_hg19_v1_chr12_+_96252771 BC128452 BC128453	-104295	+	BC096096 BC096097 BC096098 BC096099 D16626 AK303544 NM_002108 AK298736 AK297004 TSC_hg19_v1_chr12_-_96390137	32992	-	CR457068 AB590523 AB209740 J02959 TSC_hg19_v1_chr12_-_96429366 BC032528 J03459 NM_000895 AK308184	72251	-	AK301308 TSC_hg19_v1_chr12_-_96429399 AK310522 AK293630	72333	-	AK054617|AMDHD1|144193|amidohydrolase domain containing 1##NM_152435|AMDHD1|144193|amidohydrolase domain containing 1##AK122802|AMDHD1|144193|amidohydrolase domain containing 1##AB075878|AMDHD1|144193|amidohydrolase domain containing 1##AK290828|AMDHD1|144193|amidohydrolase domain containing 1##BC029146|AMDHD1|144193|amidohydrolase domain containing 1##BC095479|CCDC38|120935|coiled-coil domain containing 38##BC047659|CCDC38|120935|coiled-coil domain containing 38##AK097408|CCDC38|120935|coiled-coil domain containing 38##NM_182496|CCDC38|120935|coiled-coil domain containing 38##BC128452|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC128453|SNRPF|6636|small nuclear ribonucleoprotein polypeptide F##BC096096|HAL|3034|histidine ammonia-lyase##BC096097|HAL|3034|histidine ammonia-lyase##BC096098|HAL|3034|histidine ammonia-lyase##BC096099|HAL|3034|histidine ammonia-lyase##D16626|HAL|3034|histidine ammonia-lyase##AK303544|HAL|3034|histidine ammonia-lyase##NM_002108|HAL|3034|histidine ammonia-lyase##AK298736|HAL|3034|histidine ammonia-lyase##AK297004|HAL|3034|histidine ammonia-lyase##CR457068|LTA4H|4048|leukotriene A4 hydrolase##AB209740|LTA4H|4048|leukotriene A4 hydrolase##J02959|LTA4H|4048|leukotriene A4 hydrolase##BC032528|LTA4H|4048|leukotriene A4 hydrolase##J03459|LTA4H|4048|leukotriene A4 hydrolase##NM_000895|LTA4H|4048|leukotriene A4 hydrolase##AK308184|LTA4H|4048|leukotriene A4 hydrolase##AK301308|LTA4H|4048|leukotriene A4 hydrolase##AK293630|LTA4H|4048|leukotriene A4 hydrolase	0.740319	CTCF.p2:33:0.740
chr1	39981525	39981621	reg1031039.p2	4.043	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	-24228	+	TSC_hg19_v1_chr1_+_39922264 AK023821	-59254	+	NM_015038	-106398	+	BC029969 TSC_hg19_v1_chr1_-_40042150	60538	-	U75686 BC065540 TSC_hg19_v1_chr1_-_40042460 BC071591	60864	-	BC094755 TSC_hg19_v1_chr1_-_40042463	60903	-	AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##NM_015038|KIAA0754|643314|KIAA0754##BC029969|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##U75686|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC065540|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC071591|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC094755|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)	0.871811	CTCF.p2:5:0.872
chr15	83209204	83209379	reg1034096.p1	4.043	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	-55	-	NM_198181 CR936812	-110550	+	CR936602 NM_001164465	-191113	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	31244	-	CU690752 BC050629 NM_030594	107383	-	AK097827 TSC_hg19_v1_chr15_-_83349166	139863	-	BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK097827|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit	1.760533	CTCF.p2:15:0.953	CTCF.p2:52:0.808
chr17	74259155	74259259	reg1036702.p1	4.043	+	AK091467 AX747002 AB067504 NM_052916 TSC_hg19_v1_chr17_-_74236615	-22759	-	BC046460 NM_001454	-121833	-	TSC_hg19_v1_chr17_-_74099869 BX647763 NM_001013839 NM_001145297 NM_001145298 NM_001145299 NM_015219	-159342	-	TSC_hg19_v1_chr17_+_74261282 BC060859 NM_182565	2077	+	TSC_hg19_v1_chr17_+_74261431 BC035511 EU176314	2300	+	EU832276 EU832361 BC131559 AL136774 NM_032134	44463	-	AK091467|RNF157|114804|ring finger protein 157##AB067504|RNF157|114804|ring finger protein 157##NM_052916|RNF157|114804|ring finger protein 157##BC046460|FOXJ1|2302|forkhead box J1##NM_001454|FOXJ1|2302|forkhead box J1##BX647763|EXOC7|23265|exocyst complex component 7##NM_001013839|EXOC7|23265|exocyst complex component 7##NM_001145297|EXOC7|23265|exocyst complex component 7##NM_001145298|EXOC7|23265|exocyst complex component 7##NM_001145299|EXOC7|23265|exocyst complex component 7##NM_015219|EXOC7|23265|exocyst complex component 7##BC060859|FAM100B|283991|family with sequence similarity 100, member B##NM_182565|FAM100B|283991|family with sequence similarity 100, member B##BC035511|FAM100B|283991|family with sequence similarity 100, member B##EU176314|FAM100B|283991|family with sequence similarity 100, member B##EU832276|QRICH2|84074|glutamine rich 2##EU832361|QRICH2|84074|glutamine rich 2##BC131559|QRICH2|84074|glutamine rich 2##AL136774|QRICH2|84074|glutamine rich 2##NM_032134|QRICH2|84074|glutamine rich 2	0.059153	
chr2	122751435	122751524	reg1030656.p1	4.043	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-238242	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-257014	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-343834	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	2031385	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	4662228	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	4662313	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.0	
chr3	6640127	6640193	reg1046742.p2	4.043	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-1410669	+	TSC_hg19_v1_chr3_+_5229430 D86967	-1410727	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	-1410797	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	262639	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	262738	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	1903170	-	DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK124088|LOC100288428|100288428|uncharacterized LOC100288428	0.0	
chr5	132202088	132202179	reg1031162.p1	4.043	+	NM_005260	-1657	-	AB075840 NM_001172700	-35544	-	DQ655971 TSC_hg19_v1_chr5_-_132166340 BC040980	-35829	-	TSC_hg19_v1_chr5_+_132202333 NM_014402 AK297061 BC090048 BC064949 AK312148 BC001390	214	+	TSC_hg19_v1_chr5_+_132209359 AJ306405 AY052782 NM_052971 BC070199	7223	+	TSC_hg19_v1_chr5_-_132272811 CU687624 CU693016	70710	-	NM_005260|GDF9|2661|growth differentiation factor 9##AB075840|SHROOM1|134549|shroom family member 1##NM_001172700|SHROOM1|134549|shroom family member 1##NM_014402|UQCRQ|27089|ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa##AK297061|UQCRQ|27089|ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa##BC090048|UQCRQ|27089|ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa##BC064949|UQCRQ|27089|ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa##AK312148|UQCRQ|27089|ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa##BC001390|UQCRQ|27089|ubiquinol-cytochrome c reductase, complex III subunit VII, 9.5kDa##AJ306405|LEAP2|116842|liver expressed antimicrobial peptide 2##AY052782|LEAP2|116842|liver expressed antimicrobial peptide 2##NM_052971|LEAP2|116842|liver expressed antimicrobial peptide 2##BC070199|LEAP2|116842|liver expressed antimicrobial peptide 2	0.0	
chr5	173249698	173249839	reg1026042.p1	4.043	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-206095	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-206140	-	BC003114 TSC_hg19_v1_chr5_-_173043602	-206171	-	TSC_hg19_v1_chr5_+_173315343 NM_030627	65610	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	166422	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	222943	+	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein	0.0	
chr6	45705395	45705518	reg1032967.p1	4.043	+	TSC_hg19_v1_chr6_+_45390379 L40992	-315044	+	TSC_hg19_v1_chr6_+_45390325 BC108919 BC108920	-315151	+	TSC_hg19_v1_chr6_+_45389825 NM_004348	-315591	+	DQ892643 DQ895881 CU690236 AF176920 AK314416 AK075163 TSC_hg19_v1_chr6_-_45983598 AK075144 AF216941 AK222544 BC035968 DQ679794 AK223130 NM_016929	278021	-	AY032602 AK097048 NM_001114086	342575	-	NM_014936 TSC_hg19_v1_chr6_+_46097726 BC018054	392258	+	L40992|RUNX2|860|runt-related transcription factor 2##BC108919|RUNX2|860|runt-related transcription factor 2##BC108920|RUNX2|860|runt-related transcription factor 2##NM_004348|RUNX2|860|runt-related transcription factor 2##DQ892643|CLIC5|53405|chloride intracellular channel 5##DQ895881|CLIC5|53405|chloride intracellular channel 5##AF176920|CLIC5|53405|chloride intracellular channel 5##AK314416|CLIC5|53405|chloride intracellular channel 5##AK075163|CLIC5|53405|chloride intracellular channel 5##AK075144|CLIC5|53405|chloride intracellular channel 5##AF216941|CLIC5|53405|chloride intracellular channel 5##AK222544|CLIC5|53405|chloride intracellular channel 5##BC035968|CLIC5|53405|chloride intracellular channel 5##DQ679794|CLIC5|53405|chloride intracellular channel 5##AK223130|CLIC5|53405|chloride intracellular channel 5##NM_016929|CLIC5|53405|chloride intracellular channel 5##AY032602|CLIC5|53405|chloride intracellular channel 5##AK097048|CLIC5|53405|chloride intracellular channel 5##NM_001114086|CLIC5|53405|chloride intracellular channel 5##NM_014936|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##BC018054|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)	0.0	
chr8	12321861	12321951	reg1037203.p2	4.043	+	BC085016 TSC_hg19_v1_chr8_-_12293910 AK291001 AK298940	-28002	-	AK309984 NM_001137610 AK098138 AK308513 TSC_hg19_v1_chr8_-_12293868 AK297741 AK308439	-28063	-	DQ012022 NM_001037804 NM_001195257	-146082	-	TSC_hg19_v1_chr8_-_12612974 NM_152271	291098	-	AK296010 NM_020844	481260	+	AB040889 NM_001099677	547866	+	BC085016|FAM86B1|85002|family with sequence similarity 86, member B1##AK291001|FAM86B2|653333|family with sequence similarity 86, member B2##AK298940|FAM86B2|653333|family with sequence similarity 86, member B2##AK309984|FAM86B2|653333|family with sequence similarity 86, member B2##NM_001137610|FAM86B2|653333|family with sequence similarity 86, member B2##AK098138|FAM86B1|85002|family with sequence similarity 86, member B1##AK308513|FAM86B1|85002|family with sequence similarity 86, member B1##AK297741|FAM86B2|653333|family with sequence similarity 86, member B2##AK308439|FAM86B1|85002|family with sequence similarity 86, member B1##DQ012022|DEFB130|245940|defensin, beta 130##NM_001037804|DEFB130|245940|defensin, beta 130##NM_001195257|LOC100133267|100133267|defensin, beta 130-like##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456	0.0	
chr12	50093040	50093221	reg1033256.p2	4.042	+	BC067364 NM_001031698	-68804	+	TSC_hg19_v1_chr12_+_50017344 AK123353 BC050398 AL834216 NM_012272	-75759	+	AM393365 AL136748 BC035621 AK302702 AK093242 AX748009 NM_032130	-93785	-	AB384661 TSC_hg19_v1_chr12_-_50101046	7880	-	TSC_hg19_v1_chr12_-_50101189 AK128195	8028	-	TSC_hg19_v1_chr12_-_50101206 AB095934 BC159100 NM_175736 NM_198900	8082	-	BC067364|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_001031698|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AK123353|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##BC050398|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AL834216|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_012272|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AM393365|FAM186B|84070|family with sequence similarity 186, member B##AL136748|FAM186B|84070|family with sequence similarity 186, member B##BC035621|FAM186B|84070|family with sequence similarity 186, member B##AK302702|FAM186B|84070|family with sequence similarity 186, member B##AK093242|FAM186B|84070|family with sequence similarity 186, member B##NM_032130|FAM186B|84070|family with sequence similarity 186, member B##AK128195|FMNL3|91010|formin-like 3##AB095934|FMNL3|91010|formin-like 3##BC159100|FMNL3|91010|formin-like 3##NM_175736|FMNL3|91010|formin-like 3##NM_198900|FMNL3|91010|formin-like 3	0.0	
chr1	28201789	28201969	reg1026892.p1	4.042	+	CR749321 BC132692 BC133049 NM_001039477 NM_001105556 NM_004848 TSC_hg19_v1_chr1_+_28199054 AK303141 HQ258751 BC031655 AK303090	-2807	+	AF126488 AX775985 TSC_hg19_v1_chr1_+_28157335 AK313814 AB464098 U14575	-44538	+	TSC_hg19_v1_chr1_+_28157334 AF061958 AK292077 AK297771 AK304619 NM_002713 NM_138558 AK307570 BC093017	-44551	+	CR450348 DQ892352 DQ895821 TSC_hg19_v1_chr1_-_28241083 J05249 BC001630 AK300691 AK312956 AK296898 AK298759 BC012157	39170	-	TSC_hg19_v1_chr1_-_28241258 BC021257 NM_002946	39385	-	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	59682	+	CR749321|C1orf38|9473|chromosome 1 open reading frame 38##BC132692|C1orf38|9473|chromosome 1 open reading frame 38##BC133049|C1orf38|9473|chromosome 1 open reading frame 38##NM_001039477|C1orf38|9473|chromosome 1 open reading frame 38##NM_001105556|C1orf38|9473|chromosome 1 open reading frame 38##NM_004848|C1orf38|9473|chromosome 1 open reading frame 38##AK303141|C1orf38|9473|chromosome 1 open reading frame 38##HQ258751|C1orf38|9473|chromosome 1 open reading frame 38##BC031655|C1orf38|9473|chromosome 1 open reading frame 38##AK303090|C1orf38|9473|chromosome 1 open reading frame 38##AF126488|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AX775985|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK313814|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##U14575|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AF061958|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK292077|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK297771|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK304619|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_002713|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_138558|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK307570|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##BC093017|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##CR450348|RPA2|6118|replication protein A2, 32kDa##DQ892352|RPA2|6118|replication protein A2, 32kDa##DQ895821|RPA2|6118|replication protein A2, 32kDa##J05249|RPA2|6118|replication protein A2, 32kDa##BC001630|RPA2|6118|replication protein A2, 32kDa##AK300691|RPA2|6118|replication protein A2, 32kDa##AK312956|RPA2|6118|replication protein A2, 32kDa##AK298759|RPA2|6118|replication protein A2, 32kDa##BC012157|RPA2|6118|replication protein A2, 32kDa##BC021257|RPA2|6118|replication protein A2, 32kDa##NM_002946|RPA2|6118|replication protein A2, 32kDa##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	0.0	
chr19	35046444	35046592	reg1037263.p1	4.042	+	TSC_hg19_v1_chr19_+_34972869 NM_001080436	-73646	+	TSC_hg19_v1_chr19_+_34919329 DQ893423 EU176757 CU678406 AF110957 BT009781 CR456756	-127177	+	TSC_hg19_v1_chr19_+_34919307 AF090384 AL136905 U35832	-127209	+	BC093909 BC093935 NM_001025591	38971	-	TSC_hg19_v1_chr19_+_35168582 AL834318 NM_001012320 NM_018443 AK074901 AF155656 AK315241 AF190157 AK297551 AK131278 BC024176 AF265236 AF326206	122131	+	TSC_hg19_v1_chr19_+_35225102 BC043228	178580	+	NM_001080436|WTIP|126374|Wilms tumor 1 interacting protein##DQ893423|UBA2|10054|ubiquitin-like modifier activating enzyme 2##EU176757|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AF110957|UBA2|10054|ubiquitin-like modifier activating enzyme 2##BT009781|UBA2|10054|ubiquitin-like modifier activating enzyme 2##CR456756|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AF090384|UBA2|10054|ubiquitin-like modifier activating enzyme 2##AL136905|UBA2|10054|ubiquitin-like modifier activating enzyme 2##U35832|UBA2|10054|ubiquitin-like modifier activating enzyme 2##BC093909|SCGBL|284402|secretoglobin-like##BC093935|SCGBL|284402|secretoglobin-like##NM_001025591|SCGBL|284402|secretoglobin-like##AL834318|ZNF302|55900|zinc finger protein 302##NM_001012320|ZNF302|55900|zinc finger protein 302##NM_018443|ZNF302|55900|zinc finger protein 302##AK074901|ZNF302|55900|zinc finger protein 302##AF155656|ZNF302|55900|zinc finger protein 302##AK315241|ZNF302|55900|zinc finger protein 302##AF190157|ZNF302|55900|zinc finger protein 302##AK131278|ZNF302|55900|zinc finger protein 302##BC024176|ZNF302|55900|zinc finger protein 302##AF265236|ZNF302|55900|zinc finger protein 302##AF326206|ZNF302|55900|zinc finger protein 302##BC043228|ZNF181|339318|zinc finger protein 181	0.987949	CTCF.p2:32:0.988
chr22	43386180	43386301	reg1030995.p1	4.042	+	AL136845 NM_001184971	-30354	-	BC008037 NM_007229	-43194	-	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-132885	-	TSC_hg19_v1_chr22_-_43411136 AF128536	24899	-	TSC_hg19_v1_chr22_-_43411156 NM_001184970	24937	-	TSC_hg19_v1_chr22_-_43485410 AF104927 AF173935 AK315658 BC009058 AK095996 BC014968 AL136687 NM_012263	99147	-	AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184970|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF104927|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AF173935|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK315658|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC009058|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK095996|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC014968|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AL136687|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_012263|TTLL1|25809|tubulin tyrosine ligase-like family, member 1	0.877063	CTCF.p2:-25:0.877
chr5	169758279	169758458	reg1029578.p1	4.042	+	TSC_hg19_v1_chr5_-_169724821 NM_005565	-33517	-	AK292890 TSC_hg19_v1_chr5_-_169724784 AK300000	-33570	-	TSC_hg19_v1_chr5_-_169724734 BC016618 AK310369	-33613	-	DQ148476 NM_001034838	22512	+	TSC_hg19_v1_chr5_+_169816493 AK311026	58128	+	BC025707 NM_004137 AK313979	58279	-	NM_005565|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK292890|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK300000|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ148476|KCNIP1|30820|Kv channel interacting protein 1##NM_001034838|KCNIP1|30820|Kv channel interacting protein 1##BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1	0.0	
chr8	22572971	22573061	reg1031108.p1	4.042	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-22232	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-22511	-	AK294968 AK295834 NM_001199881	-22942	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	212308	-	AK092617 BC034917 NM_001160036	271907	+	NM_001160037	280344	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.0	
chr8	54035002	54035079	reg1031813.p2	4.042	+	BC069117 BC107101 NM_005285	-182573	+	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	-408027	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	-408054	-	BC099912 AK310407 AY168006 NM_000912 AY466378	129172	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	720639	-	AK022345 TSC_hg19_v1_chr8_-_54755834	720787	-	BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1##BC099912|OPRK1|4986|opioid receptor, kappa 1##AK310407|OPRK1|4986|opioid receptor, kappa 1##AY168006|OPRK1|4986|opioid receptor, kappa 1##NM_000912|OPRK1|4986|opioid receptor, kappa 1##AY466378|OPRK1|4986|opioid receptor, kappa 1##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H	0.0	
chr9	32069261	32069384	reg1029952.p1	4.042	+	AK056372 NM_152570	-3350020	-	AK057806 JN681271 NM_145005	-4495481	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-4495851	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	315268	+	TSC_hg19_v1_chr9_+_32384622 AK057904	315305	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	315327	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.821795	CTCF.p2:40:0.822
chr10	5727596	5727720	reg1029498.p1	4.041	+	TSC_hg19_v1_chr10_+_5726806 CR936780 NM_017782	-835	+	AK292071 TSC_hg19_v1_chr10_-_5708559 AK091935 AX747265 NM_024701	-19101	-	TSC_hg19_v1_chr10_-_5708534 CR457302 BC012056 AF403031 AK023196	-19132	-	TSC_hg19_v1_chr10_+_5772610 AB095927	45014	+	BX648038 AB451295 AB451429 BT006868 CR457073 D13988 DQ890573 DQ893733 BC005145 TSC_hg19_v1_chr10_-_5855330 AK309360	127608	-	TSC_hg19_v1_chr10_-_5855394 Y13286 AK297177 AK297554 AK312485 NM_001115156 NM_001494	127777	-	CR936780|FAM208B|54906|family with sequence similarity 208, member B##NM_017782|FAM208B|54906|family with sequence similarity 208, member B##AK292071|ASB13|79754|ankyrin repeat and SOCS box containing 13##AK091935|ASB13|79754|ankyrin repeat and SOCS box containing 13##NM_024701|ASB13|79754|ankyrin repeat and SOCS box containing 13##CR457302|ASB13|79754|ankyrin repeat and SOCS box containing 13##BC012056|ASB13|79754|ankyrin repeat and SOCS box containing 13##AF403031|ASB13|79754|ankyrin repeat and SOCS box containing 13##AK023196|ASB13|79754|ankyrin repeat and SOCS box containing 13##AB095927|FAM208B|54906|family with sequence similarity 208, member B##BX648038|GDI2|2665|GDP dissociation inhibitor 2##AB451295|GDI2|2665|GDP dissociation inhibitor 2##AB451429|GDI2|2665|GDP dissociation inhibitor 2##BT006868|GDI2|2665|GDP dissociation inhibitor 2##CR457073|GDI2|2665|GDP dissociation inhibitor 2##D13988|GDI2|2665|GDP dissociation inhibitor 2##DQ890573|GDI2|2665|GDP dissociation inhibitor 2##DQ893733|GDI2|2665|GDP dissociation inhibitor 2##BC005145|GDI2|2665|GDP dissociation inhibitor 2##AK309360|GDI2|2665|GDP dissociation inhibitor 2##Y13286|GDI2|2665|GDP dissociation inhibitor 2##AK297177|GDI2|2665|GDP dissociation inhibitor 2##AK297554|GDI2|2665|GDP dissociation inhibitor 2##AK312485|GDI2|2665|GDP dissociation inhibitor 2##NM_001115156|GDI2|2665|GDP dissociation inhibitor 2##NM_001494|GDI2|2665|GDP dissociation inhibitor 2	0.031255	
chr12	115812902	115813083	reg1022504.p1	4.041	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-690852	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-966774	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-969068	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	901958	-	TSC_hg19_v1_chr12_-_116715263 AY338463	902168	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	1158237	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.0	
chr12	124860101	124860215	reg1034908.p1	4.041	+	AK126577 NM_181709	-86449	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-402429	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-402959	-	TSC_hg19_v1_chr12_-_125002875 BC033087	142701	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	191917	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	488147	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.075478	
chr12	90102562	90102631	reg1030983.p1	4.041	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-52745	-	AK297677 NM_001199781 NM_001199782 NM_172240	-182558	-	CU693124 TSC_hg19_v1_chr12_-_89919778 BX647258 AK074772 AK295596 BC026080 EF011619	-182836	-	TSC_hg19_v1_chr12_+_90102640 BC040326	91	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	949	+	BC026075 BC024183 BC027600 BC034491 NM_152638	1246355	-	J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##AK297677|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199781|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199782|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_172240|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BX647258|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##AK074772|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK295596|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BC026080|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##EF011619|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BC040326|LOC338758|338758|uncharacterized LOC338758##BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12	0.048978	
chr17	36823706	36823886	reg1002227.p1	4.041	+	TSC_hg19_v1_chr17_-_36762161 AB127405 NM_025248	-61600	-	BC029278 TSC_hg19_v1_chr17_-_36760969	-62858	-	TSC_hg19_v1_chr17_-_36729122 AK295027	-94674	-	TSC_hg19_v1_chr17_-_36831211 NM_001130677	7389	-	TSC_hg19_v1_chr17_+_36861421 BC064612	37803	+	TSC_hg19_v1_chr17_+_36861879 AK310435 AK310437 NM_005937 AB384930 CU687922 U07932 AB209633	38094	+	AB127405|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_025248|SRCIN1|80725|SRC kinase signaling inhibitor 1##BC029278|SRCIN1|80725|SRC kinase signaling inhibitor 1##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1##NM_001130677|C17orf96|100170841|chromosome 17 open reading frame 96##BC064612|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AK310435|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AK310437|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##NM_005937|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##U07932|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6##AB209633|MLLT6|4302|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6	0.0	
chr19	24216449	24216580	reg1027763.p2	4.041	+	TSC_hg19_v1_chr19_+_24216256 AK092150 AK092080 AK303431	-258	+	TSC_hg19_v1_chr19_+_24097711 NM_001244038 AX721133 BC046415 AB593087	-118820	+	TSC_hg19_v1_chr19_+_23945812 BC071971	-270701	+	TSC_hg19_v1_chr19_+_24269988 AF054180 NM_203282 BC056243 AK291286 BC043147 BC139749	53455	+	TSC_hg19_v1_chr19_+_28284377 BC024732	4067874	+	TSC_hg19_v1_chr19_-_28284831 AK311452	4068319	-	AK303431|ZNF254|9534|zinc finger protein 254##NM_001244038|ZNF726|730087|zinc finger protein 726##BC046415|ZNF726|730087|zinc finger protein 726##BC071971|RPSAP58|388524|ribosomal protein SA pseudogene 58##AF054180|ZNF254|9534|zinc finger protein 254##NM_203282|ZNF254|9534|zinc finger protein 254##BC056243|ZNF254|9534|zinc finger protein 254##AK291286|ZNF254|9534|zinc finger protein 254##BC043147|ZNF254|9534|zinc finger protein 254##BC139749|ZNF254|9534|zinc finger protein 254##AK311452|LOC148189|148189|uncharacterized LOC148189	0.905163	CTCF.p2:46:0.905
chr1	94706484	94706606	reg1034743.p1	4.041	+	TSC_hg19_v1_chr1_-_94703252 BC067839 NM_004815	-3266	-	TSC_hg19_v1_chr1_-_94703141 BC093767 U90920 AK307733 BC022483	-3481	-	AF001945 U88667 AK295818 AF000148 AB210040 DQ426859 NM_000350	-119854	-	TSC_hg19_v1_chr1_+_94883966 NM_001122674 NM_002858	177403	+	AK296791 TSC_hg19_v1_chr1_+_94883971 AK302714 AK308159 BC068509 BC009712 X58528 AB529219 CU679455 BT006644 M81182	177456	+	AF497569 AF497570 BT019808 CR541792 AB528376 AF487337 DQ892755 M16553 TSC_hg19_v1_chr1_-_95007316 M27436 J02931 AK312638 AK310918 AY940729 BC011029 NM_001178096 NM_001993	300730	-	BC067839|ARHGAP29|9411|Rho GTPase activating protein 29##NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29##BC093767|ARHGAP29|9411|Rho GTPase activating protein 29##U90920|ARHGAP29|9411|Rho GTPase activating protein 29##AK307733|ARHGAP29|9411|Rho GTPase activating protein 29##BC022483|ARHGAP29|9411|Rho GTPase activating protein 29##AF001945|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##U88667|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AK295818|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AF000148|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##AB210040|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##DQ426859|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##NM_000350|ABCA4|24|ATP-binding cassette, sub-family A (ABC1), member 4##NM_001122674|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_002858|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK296791|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK302714|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK308159|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC068509|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC009712|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##X58528|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BT006644|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##M81182|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AF497569|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF497570|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BT019808|F3|2152|coagulation factor III (thromboplastin, tissue factor)##CR541792|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF487337|F3|2152|coagulation factor III (thromboplastin, tissue factor)##DQ892755|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M16553|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M27436|F3|2152|coagulation factor III (thromboplastin, tissue factor)##J02931|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK312638|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK310918|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AY940729|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BC011029|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001178096|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001993|F3|2152|coagulation factor III (thromboplastin, tissue factor)	0.964556	CTCF.p2:34:0.965
chr6	12354883	12355031	reg1030948.p1	4.041	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	-64364	+	NM_002114	-342234	+	NM_001143948 NM_032744	-575678	-	TSC_hg19_v1_chr6_+_12514301 D28417	159345	+	AK295263 TSC_hg19_v1_chr6_+_12716998	361986	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	362086	+	NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1	0.0	
chr11	44622621	44622706	reg1034969.p1	4.040	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-35436	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-35498	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-290987	-	NM_130783	163312	+	TSC_hg19_v1_chr11_-_44956087 AF010315	333444	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	349754	-	AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_130783|TSPAN18|90139|tetraspanin 18##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11	0.037457	
chr1	91317523	91317590	reg1027247.p2	4.040	+	BC126439 BC126441 AY338397 NM_020063	-134771	-	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	-856840	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-1029992	+	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	169482	-	TSC_hg19_v1_chr1_-_91487583 BC041138 AK291520	170007	-	TSC_hg19_v1_chr1_-_91487586 BC092462	170033	-	BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644##BC041138|ZNF644|84146|zinc finger protein 644##AK291520|ZNF644|84146|zinc finger protein 644##BC092462|ZNF644|84146|zinc finger protein 644	0.0	
chr2	240900830	240900924	reg1027030.p1	4.040	+	TSC_hg19_v1_chr2_-_240323341 AK308791	-577529	-	TSC_hg19_v1_chr2_-_240322695 BC039904	-578179	-	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	-578229	-	AF453834 TSC_hg19_v1_chr2_-_240964750 CU678462 DQ891011 DQ894191 BC031332 AF087661 AB209440 AK290778 BC003417 AF087854	63884	-	TSC_hg19_v1_chr2_-_240964807 NM_004544	63935	-	NM_001005853 BC137561 BC137562	68998	-	AK308791|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##AF453834|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ891011|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ894191|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC031332|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087661|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AB209440|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AK290778|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC003417|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087854|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_004544|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_001005853|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137561|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137562|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2	0.0	
chr2	75660016	75660196	reg1020859.p1	4.040	+	AK289765 NM_001058 NM_015727	-233478	-	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-474321	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-597855	-	BC016157 TSC_hg19_v1_chr2_-_75788066	127941	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	127984	-	AK023453 NM_032181	136741	-	AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A	0.0	
chr7	43518761	43518942	reg1032750.p2	4.040	+	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	-366625	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-546882	+	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	-547050	-	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	103843	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	250243	-	TSC_hg19_v1_chr7_+_43798278 NM_000712 NM_001253823 BC005902 BC008456	279416	+	AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44##NM_000712|BLVRA|644|biliverdin reductase A##NM_001253823|BLVRA|644|biliverdin reductase A##BC005902|BLVRA|644|biliverdin reductase A##BC008456|BLVRA|644|biliverdin reductase A	0.964556	CTCF.p2:-20:0.965
chr7	963031	963171	reg1028828.p2	4.040	+	AK300644 AK300859 TSC_hg19_v1_chr7_-_960513	-2587	-	TSC_hg19_v1_chr7_+_916249 BC003550 AK023560 AF132954	-46831	+	TSC_hg19_v1_chr7_+_916188 NM_015949	-46898	+	TSC_hg19_v1_chr7_-_994129 AB587419 BC033747	31014	-	TSC_hg19_v1_chr7_-_994317 NM_006869	31212	-	TSC_hg19_v1_chr7_-_994377 AJ006422	31362	-	AK300644|ADAP1|11033|ArfGAP with dual PH domains 1##AK300859|ADAP1|11033|ArfGAP with dual PH domains 1##BC003550|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK023560|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AF132954|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##NM_015949|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##BC033747|ADAP1|11033|ArfGAP with dual PH domains 1##NM_006869|ADAP1|11033|ArfGAP with dual PH domains 1##AJ006422|ADAP1|11033|ArfGAP with dual PH domains 1	0.0	
chr11	118743257	118743419	reg1026879.p1	4.039	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-81404	-	TSC_hg19_v1_chr11_-_118661865 Z11685	-81459	-	TSC_hg19_v1_chr11_-_118661860 BC026228	-81479	-	AK291512 NM_001716 BC110352 X68149 AB464488	11222	+	NM_032966 X68829	20762	+	AB094091 NM_182557	38274	-	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like	0.0	
chr12	70796596	70796663	reg1022111.p2	4.039	+	TSC_hg19_v1_chr12_+_70760230 NM_014505 AF160967 BC042446 BC050621 AF215891 AF207992	-36363	+	AK307479 NM_001199303 AK095789	-159118	+	AK000662 TSC_hg19_v1_chr12_+_70637212 AF044215 BC011826 BC002597 AF161480	-159394	+	TSC_hg19_v1_chr12_+_70861858 BC031864	65239	+	BC101679 BC113463 BC143356 BC143360 NM_001206971 NM_001206972 NM_002837 X54131	206993	-	AB587339 TSC_hg19_v1_chr12_-_71031179 AK128562 BC051329 BX647238 CR749546 BX648245 AK126121 NM_001109754	234567	-	NM_014505|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AF160967|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##BC042446|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##BC050621|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AF215891|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AF207992|KCNMB4|27345|potassium large conductance calcium-activated channel, subfamily M, beta member 4##AK307479|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##NM_001199303|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK095789|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AK000662|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AF044215|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##BC011826|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##BC002597|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##AF161480|CNOT2|4848|CCR4-NOT transcription complex, subunit 2##BC101679|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC113463|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143356|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC143360|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206971|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001206972|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_002837|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##X54131|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##AK128562|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BC051329|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX647238|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##CR749546|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##BX648245|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##AK126121|PTPRB|5787|protein tyrosine phosphatase, receptor type, B##NM_001109754|PTPRB|5787|protein tyrosine phosphatase, receptor type, B	0.245524	
chr19	2067905	2068004	reg1013871.p1	4.039	+	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-16721	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-21713	-	TSC_hg19_v1_chr19_-_2042036 AK001730	-25904	-	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	17289	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	28311	-	TSC_hg19_v1_chr19_-_2096297 AL832474	28340	-	BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK001730|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A	0.0	
chr19	7451320	7451413	reg1022450.p2	4.039	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	-157406	-	TSC_hg19_v1_chr19_-_7099547 AK127494	-351815	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-381651	+	TSC_hg19_v1_chr19_+_7460030 NM_015318	8641	+	TSC_hg19_v1_chr19_+_7460061 AB011093	8711	+	AK127045 NM_001130955	53207	+	BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.61306	
chr2	183649568	183649709	reg1032796.p1	4.039	+	TSC_hg19_v1_chr2_+_183608333 AK074905	-41288	+	TSC_hg19_v1_chr2_+_183582683 BC107425 AF314529 AY089971 HQ258514 HQ258651 AL832646 AK027450	-66891	+	TSC_hg19_v1_chr2_+_183580986 AL832632 AK027647 NM_018981 AY358577 AF490904 AK027696 BC070034 BC117299 BC126168 AF038503	-68564	+	BT019883 DQ890944 DQ894106 AK130009 U68057 U91903 BC027855 AK312741 U24163 NM_001463	81750	-	TSC_hg19_v1_chr2_-_183903062 BT007033 AB383914 DQ893545 DQ893809 AB014509 AK292914 BC015025	253346	-	TSC_hg19_v1_chr2_-_183903230 NM_013436 NM_205842	253606	-	AK074905|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC107425|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF314529|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY089971|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258514|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##HQ258651|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832646|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027450|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AL832632|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027647|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##NM_018981|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AY358577|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF490904|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AK027696|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC070034|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC117299|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BC126168|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##AF038503|DNAJC10|54431|DnaJ (Hsp40) homolog, subfamily C, member 10##BT019883|FRZB|2487|frizzled-related protein##DQ890944|FRZB|2487|frizzled-related protein##DQ894106|FRZB|2487|frizzled-related protein##AK130009|FRZB|2487|frizzled-related protein##U68057|FRZB|2487|frizzled-related protein##U91903|FRZB|2487|frizzled-related protein##BC027855|FRZB|2487|frizzled-related protein##AK312741|FRZB|2487|frizzled-related protein##U24163|FRZB|2487|frizzled-related protein##NM_001463|FRZB|2487|frizzled-related protein##BT007033|NCKAP1|10787|NCK-associated protein 1##DQ893545|NCKAP1|10787|NCK-associated protein 1##DQ893809|NCKAP1|10787|NCK-associated protein 1##AB014509|NCKAP1|10787|NCK-associated protein 1##AK292914|NCKAP1|10787|NCK-associated protein 1##BC015025|NCKAP1|10787|NCK-associated protein 1##NM_013436|NCKAP1|10787|NCK-associated protein 1##NM_205842|NCKAP1|10787|NCK-associated protein 1	0.996292	CTCF.p2:-22:0.996
chr22	35978998	35979179	reg1003287.p1	4.039	+	BC013419 NM_014310 CR456477	-41695	+	TSC_hg19_v1_chr22_+_35936902 AX721069	-42186	+	TSC_hg19_v1_chr22_+_35796295 AB463121 CU013117 CU013405 CU674060 CU678562	-182726	+	CR541949 CU013116 CU013404 DQ893679 DQ896050 AB528844 CR456516 TSC_hg19_v1_chr22_-_36013480 AK300657 BC014547 NM_005368 AK314057 NM_203378	34340	-	TSC_hg19_v1_chr22_-_36019368 NM_203377	40293	-	TSC_hg19_v1_chr22_+_36044432 AY014879 NM_030641 BC047864 AX775805 AL834420 AK095881	65348	+	BC013419|RASD2|23551|RASD family, member 2##NM_014310|RASD2|23551|RASD family, member 2##CR456477|RASD2|23551|RASD family, member 2##CU013117|MCM5|4174|minichromosome maintenance complex component 5##CU013405|MCM5|4174|minichromosome maintenance complex component 5##CR541949|MB|4151|myoglobin##CU013116|MB|4151|myoglobin##CU013404|MB|4151|myoglobin##DQ893679|MB|4151|myoglobin##DQ896050|MB|4151|myoglobin##CR456516|MB|4151|myoglobin##AK300657|MB|4151|myoglobin##BC014547|MB|4151|myoglobin##NM_005368|MB|4151|myoglobin##AK314057|MB|4151|myoglobin##NM_203378|MB|4151|myoglobin##NM_203377|MB|4151|myoglobin##AY014879|APOL6|80830|apolipoprotein L, 6##NM_030641|APOL6|80830|apolipoprotein L, 6##BC047864|APOL6|80830|apolipoprotein L, 6##AL834420|APOL6|80830|apolipoprotein L, 6##AK095881|APOL6|80830|apolipoprotein L, 6	0.0	
chr4	128801766	128801904	reg1030270.p1	4.039	+	TSC_hg19_v1_chr4_+_128703491 AY290862 AB023421 EF197155	-98243	+	TSC_hg19_v1_chr4_+_128703476 AK027822 AK307464	-98359	+	TSC_hg19_v1_chr4_+_128703445 BC040560 NM_014278	-98402	+	NM_001190799 NM_014264 AK314238 BC036023 TSC_hg19_v1_chr4_+_128802063	204	+	TSC_hg19_v1_chr4_+_128802067 AK303399 AB006972 Y13115 DQ894189 CU690262 AK302858 NM_001190801	396	+	TSC_hg19_v1_chr4_-_128886304 CU688672 AK294439 AK315596 AK074564	84480	-	AY290862|HSPA4L|22824|heat shock 70kDa protein 4-like##AB023421|HSPA4L|22824|heat shock 70kDa protein 4-like##EF197155|HSPA4L|22824|heat shock 70kDa protein 4-like##AK027822|HSPA4L|22824|heat shock 70kDa protein 4-like##AK307464|HSPA4L|22824|heat shock 70kDa protein 4-like##BC040560|HSPA4L|22824|heat shock 70kDa protein 4-like##NM_014278|HSPA4L|22824|heat shock 70kDa protein 4-like##NM_001190799|PLK4|10733|polo-like kinase 4##NM_014264|PLK4|10733|polo-like kinase 4##AK314238|PLK4|10733|polo-like kinase 4##BC036023|PLK4|10733|polo-like kinase 4##AK303399|PLK4|10733|polo-like kinase 4##AB006972|PLK4|10733|polo-like kinase 4##Y13115|PLK4|10733|polo-like kinase 4##DQ894189|PLK4|10733|polo-like kinase 4##AK302858|PLK4|10733|polo-like kinase 4##NM_001190801|PLK4|10733|polo-like kinase 4##AK294439|MFSD8|256471|major facilitator superfamily domain containing 8##AK315596|MFSD8|256471|major facilitator superfamily domain containing 8##AK074564|MFSD8|256471|major facilitator superfamily domain containing 8	0.0	
chr10	80828560	80828725	reg1031333.p1	4.038	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-1035011	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-1035086	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-1039328	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	146	+	TSC_hg19_v1_chr10_+_80899458 AK025812	70842	+	TSC_hg19_v1_chr10_+_81003207 AB033050	174488	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.0	
chr12	103538203	103538384	reg1036296.p1	4.038	+	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-186201	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-186772	+	L47726 NM_000277 U49897	-226913	-	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	351453	-	AY311388 AJ295695 NM_017564 AB052958	442768	+	AB032773 TSC_hg19_v1_chr12_-_104234857	696531	-	DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3	0.0	
chr1	21670161	21670341	reg1035380.p2	4.038	+	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	-53317	-	AB031742 AB384697 AJ130828 AK304167 NM_001113349 TSC_hg19_v1_chr1_-_21616765	-53543	-	D43698 TSC_hg19_v1_chr1_-_21606025 BX648351 NM_001113347	-64168	-	X98272 TSC_hg19_v1_chr1_-_21671998 NM_001113348	1729	-	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	96431	+	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	165608	+	Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1##AB031742|ECE1|1889|endothelin converting enzyme 1##AJ130828|ECE1|1889|endothelin converting enzyme 1##AK304167|ECE1|1889|endothelin converting enzyme 1##NM_001113349|ECE1|1889|endothelin converting enzyme 1##D43698|ECE1|1889|endothelin converting enzyme 1##BX648351|ECE1|1889|endothelin converting enzyme 1##NM_001113347|ECE1|1889|endothelin converting enzyme 1##X98272|ECE1|1889|endothelin converting enzyme 1##NM_001113348|ECE1|1889|endothelin converting enzyme 1##AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney	0.0	
chr17	1026577	1026683	reg1006040.p2	4.038	+	AK295191 TSC_hg19_v1_chr17_-_1012323 NM_001092 BC036807	-14321	-	TSC_hg19_v1_chr17_-_982210 AK299909	-44405	-	TSC_hg19_v1_chr17_+_900368 BC002324 NM_013337 AK000830 AK225453 AF155330	-126275	+	TSC_hg19_v1_chr17_-_1029059 AK307827	2444	-	AK302682 AB384846 TSC_hg19_v1_chr17_-_1083048 NM_021962 U01147	56439	-	TSC_hg19_v1_chr17_-_1090565 AK126882 AK124547 NM_001159746	63958	-	AK295191|ABR|29|active BCR-related gene##NM_001092|ABR|29|active BCR-related gene##BC036807|ABR|29|active BCR-related gene##AK299909|ABR|29|active BCR-related gene##BC002324|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##NM_013337|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK000830|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK225453|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AF155330|TIMM22|29928|translocase of inner mitochondrial membrane 22 homolog (yeast)##AK307827|ABR|29|active BCR-related gene##AK302682|ABR|29|active BCR-related gene##NM_021962|ABR|29|active BCR-related gene##U01147|ABR|29|active BCR-related gene##AK126882|ABR|29|active BCR-related gene##AK124547|ABR|29|active BCR-related gene##NM_001159746|ABR|29|active BCR-related gene	0.0	
chr1	9777481	9777604	reg1029473.p1	4.038	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	-65738	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-128586	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-177906	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	106353	-	TSC_hg19_v1_chr1_-_9884023 AK304813	106479	-	TSC_hg19_v1_chr1_-_9884024 BC033902	106502	-	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1	0.466702	CTCF.p2:-30:0.467
chr20	32471114	32471227	reg1035656.p1	4.038	+	TSC_hg19_v1_chr20_+_32399155 AB100261 BC033859 AY726594 AY329085	-71950	+	TSC_hg19_v1_chr20_+_32399127 NM_176812	-72084	+	BC132873 BC144188 BC157823 BC146811 BC094738 NM_032819 BC063492 BC040440 AB587355 HQ258664	-151374	+	TSC_hg19_v1_chr20_+_32581531 NM_007367 NM_016732	110309	+	TSC_hg19_v1_chr20_+_32581567 AK226085	110417	+	TSC_hg19_v1_chr20_+_32581716 BC103753 AK299766	110534	+	AB100261|CHMP4B|128866|charged multivesicular body protein 4B##BC033859|CHMP4B|128866|charged multivesicular body protein 4B##AY726594|CHMP4B|128866|charged multivesicular body protein 4B##AY329085|CHMP4B|128866|charged multivesicular body protein 4B##NM_176812|CHMP4B|128866|charged multivesicular body protein 4B##BC132873|ZNF341|84905|zinc finger protein 341##BC144188|ZNF341|84905|zinc finger protein 341##BC157823|ZNF341|84905|zinc finger protein 341##BC146811|ZNF341|84905|zinc finger protein 341##BC094738|ZNF341|84905|zinc finger protein 341##NM_032819|ZNF341|84905|zinc finger protein 341##BC063492|ZNF341|84905|zinc finger protein 341##BC040440|ZNF341|84905|zinc finger protein 341##HQ258664|ZNF341|84905|zinc finger protein 341##NM_007367|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##NM_016732|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK226085|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC103753|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK299766|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))	0.386786	CTCF.p2:-6:0.387
chr20	7907556	7907675	reg1034568.p2	4.038	+	BC069214 NM_001200	-1158871	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-1803452	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-1803738	-	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	13487	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	92685	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	92792	-	BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4	0.0	
chr2	27631035	27631149	reg1035422.p1	4.038	+	TSC_hg19_v1_chr2_-_27616444 BC073777	-14644	-	AK290690 TSC_hg19_v1_chr2_-_27603602 BC052282 NM_144631	-27494	-	AK096933 AB075875 NM_001201459 CU690896 EU446569	-27770	-	BT007454 CR457059 DQ892150 DQ895346 Y13936 TSC_hg19_v1_chr2_-_27632317	1212	-	TSC_hg19_v1_chr2_-_27632420 BC000057 BC007531 AB209197	1318	-	TSC_hg19_v1_chr2_-_27632445 BC022061	1354	-	BC073777|FTH1P3|2498|ferritin, heavy polypeptide 1 pseudogene 3##AK290690|ZNF513|130557|zinc finger protein 513##BC052282|ZNF513|130557|zinc finger protein 513##NM_144631|ZNF513|130557|zinc finger protein 513##AK096933|ZNF513|130557|zinc finger protein 513##AB075875|ZNF513|130557|zinc finger protein 513##NM_001201459|ZNF513|130557|zinc finger protein 513##EU446569|ZNF513|130557|zinc finger protein 513##BT007454|PPM1G|5496|protein phosphatase, Mg2+/Mn2+ dependent, 1G##CR457059|PPM1G|5496|protein phosphatase, Mg2+/Mn2+ dependent, 1G##DQ892150|PPM1G|5496|protein phosphatase, Mg2+/Mn2+ dependent, 1G##DQ895346|PPM1G|5496|protein phosphatase, Mg2+/Mn2+ dependent, 1G##Y13936|PPM1G|5496|protein phosphatase, Mg2+/Mn2+ dependent, 1G##BC000057|PPM1G|5496|protein phosphatase, Mg2+/Mn2+ dependent, 1G##AB209197|PPM1G|5496|protein phosphatase, Mg2+/Mn2+ dependent, 1G##BC022061|PPM1G|5496|protein phosphatase, Mg2+/Mn2+ dependent, 1G	0.024335	
chr6	17086740	17086846	reg1029603.p2	4.038	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	-325096	-	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-847942	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-943483	+	NM_001190766	15695	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	195061	+	NM_001143941	195501	+	BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24##NM_001143941|RBM24|221662|RNA binding motif protein 24	0.999551	CTCF.p2:5:1.000
chr7	35770209	35770335	reg1031391.p2	4.038	+	TSC_hg19_v1_chr7_-_35734795 NM_022373	-35494	-	BC020264 TSC_hg19_v1_chr7_-_35734751 AK055708	-35533	-	TSC_hg19_v1_chr7_-_35734533 BC005091	-35676	-	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	70438	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	70561	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	70580	+	NM_022373|HERPUD2|64224|HERPUD family member 2##BC020264|HERPUD2|64224|HERPUD family member 2##AK055708|HERPUD2|64224|HERPUD family member 2##BC005091|HERPUD2|64224|HERPUD family member 2##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7	0.0	
chr11	86072070	86072213	reg1032834.p1	4.037	+	NM_016401 TSC_hg19_v1_chr11_+_86013281 AF161487 AF161527 AK001447 AK223198 BC015991 BC021621 AK298763 BC018080 BC001677 BC006476 DQ892731 DQ895977 CU674828 CU676162	-58772	+	TSC_hg19_v1_chr11_+_85956277 BC068995 AK294133 CU686693 AB463023 EU446743 AF078933 AK301265 BC047672	-115855	+	AF099032 U90651 TSC_hg19_v1_chr11_+_85956254	-115924	+	AK131331 NM_001156474 NM_021827	13636	+	TSC_hg19_v1_chr11_-_86383218 BC022472 NM_001014811 AK092181	311064	-	X79440 TSC_hg19_v1_chr11_-_86383470 NM_006680 AK313695	311301	-	NM_016401|C11orf73|51501|chromosome 11 open reading frame 73##AF161487|C11orf73|51501|chromosome 11 open reading frame 73##AF161527|C11orf73|51501|chromosome 11 open reading frame 73##AK001447|C11orf73|51501|chromosome 11 open reading frame 73##AK223198|C11orf73|51501|chromosome 11 open reading frame 73##BC015991|C11orf73|51501|chromosome 11 open reading frame 73##BC021621|C11orf73|51501|chromosome 11 open reading frame 73##AK298763|C11orf73|51501|chromosome 11 open reading frame 73##BC018080|C11orf73|51501|chromosome 11 open reading frame 73##BC001677|C11orf73|51501|chromosome 11 open reading frame 73##BC006476|C11orf73|51501|chromosome 11 open reading frame 73##DQ892731|C11orf73|51501|chromosome 11 open reading frame 73##DQ895977|C11orf73|51501|chromosome 11 open reading frame 73##BC068995|EED|8726|embryonic ectoderm development##AK294133|EED|8726|embryonic ectoderm development##EU446743|EED|8726|embryonic ectoderm development##AF078933|EED|8726|embryonic ectoderm development##AK301265|EED|8726|embryonic ectoderm development##BC047672|EED|8726|embryonic ectoderm development##AF099032|EED|8726|embryonic ectoderm development##U90651|EED|8726|embryonic ectoderm development##AK131331|CCDC81|60494|coiled-coil domain containing 81##NM_001156474|CCDC81|60494|coiled-coil domain containing 81##NM_021827|CCDC81|60494|coiled-coil domain containing 81##BC022472|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001014811|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK092181|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##X79440|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_006680|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK313695|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial	0.0	
chr12	104806343	104806435	reg1028543.p2	4.037	+	TSC_hg19_v1_chr12_+_104697516 NM_001008394 AK098698 BC027612	-108861	+	AK128515 TSC_hg19_v1_chr12_+_104682642 AY344670 AY344671 AY344672 AY344680 AY344094 AY344096 AY344095 AY344678 AF077367 AY344679	-123777	+	D88687 TSC_hg19_v1_chr12_+_104681047 AK295067	-125303	+	TSC_hg19_v1_chr12_+_104850745 NM_001173982 NM_018413 AK313217	44305	+	AK290923 TSC_hg19_v1_chr12_+_104850752	44362	+	TSC_hg19_v1_chr12_+_104850778 BC013315	44382	+	NM_001008394|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK098698|EID3|493861|EP300 interacting inhibitor of differentiation 3##BC027612|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK128515|TXNRD1|7296|thioredoxin reductase 1##AY344670|TXNRD1|7296|thioredoxin reductase 1##AY344096|TXNRD1|7296|thioredoxin reductase 1##AY344095|TXNRD1|7296|thioredoxin reductase 1##AF077367|TXNRD1|7296|thioredoxin reductase 1##AY344679|TXNRD1|7296|thioredoxin reductase 1##D88687|TXNRD1|7296|thioredoxin reductase 1##AK295067|TXNRD1|7296|thioredoxin reductase 1##NM_001173982|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##NM_018413|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK313217|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK290923|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	0.07574	
chr13	31017197	31017290	reg1032709.p1	4.037	+	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-135674	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	-136092	-	TSC_hg19_v1_chr13_-_30424811 NM_007106	-592402	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	22750	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	22815	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	174384	-	AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##NM_007106|UBL3|5412|ubiquitin-like 3##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1	0.0	
chr1	47639627	47639731	reg1032551.p2	4.037	+	TSC_hg19_v1_chr1_+_47603114 BC148248 AY280371 NM_001010969 BC142690 BC142607 AY280372	-36557	+	AY358631 AK292175 AY262056 NM_178134 AB527374	-106575	+	BC028102 NM_178033 AK098065 AY358537 AM040940 DQ891655 DQ891656 DQ894843 EU176287 CU688398	-150316	+	CR450304 CU680280 BC012303 TSC_hg19_v1_chr1_-_47655693	15969	-	TSC_hg19_v1_chr1_-_47655728 NM_005764	16067	-	M61108 NM_003189	55763	-	BC148248|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280371|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##NM_001010969|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142690|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##BC142607|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY280372|CYP4A22|284541|cytochrome P450, family 4, subfamily A, polypeptide 22##AY358631|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##AK292175|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##AY262056|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##NM_178134|CYP4Z1|199974|cytochrome P450, family 4, subfamily Z, polypeptide 1##BC028102|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##NM_178033|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AK098065|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AY358537|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##AM040940|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891655|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ891656|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##DQ894843|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##EU176287|CYP4X1|260293|cytochrome P450, family 4, subfamily X, polypeptide 1##CR450304|PDZK1IP1|10158|PDZK1 interacting protein 1##BC012303|PDZK1IP1|10158|PDZK1 interacting protein 1##NM_005764|PDZK1IP1|10158|PDZK1 interacting protein 1##M61108|TAL1|6886|T-cell acute lymphocytic leukemia 1##NM_003189|TAL1|6886|T-cell acute lymphocytic leukemia 1	0.996479	CTCF.p2:14:0.996
chr20	47645319	47645414	reg1036564.p1	4.037	+	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	-107048	+	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	-200927	-	AB037836 TSC_hg19_v1_chr20_-_47444291	-201080	-	TSC_hg19_v1_chr20_+_47662853 BC108309 NM_001316 AF053641 U33286 AK312306 AK307965 AK297270 AK297314 AK298477 AK300589 BC109313 BC109314	17460	+	TSC_hg19_v1_chr20_+_47662875 AF053640	17522	+	TSC_hg19_v1_chr20_-_47804876 AK292859 BC001893 BC010169 AY529074 AK291487 BC007532 AK057739 AK025519 BC095397 AL136601	159420	-	BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC108309|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##NM_001316|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053641|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##U33286|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK312306|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK307965|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297270|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK298477|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK300589|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109313|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053640|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK292859|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC001893|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC010169|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AY529074|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK291487|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC007532|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK057739|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK025519|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC095397|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AL136601|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)	0.889852	CTCF.p2:7:0.890
chr22	43285341	43285446	reg1026334.p1	4.037	+	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-32038	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	-32123	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	-32182	-	BC008037 NM_007229	57653	-	AL136845 NM_001184971	70493	-	TSC_hg19_v1_chr22_-_43411136 AF128536	125746	-	NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	0.0	
chr3	160559371	160559496	reg1034442.p1	4.037	+	AY337264 NM_139245	-85438	+	TSC_hg19_v1_chr3_+_160473386 BC110801	-86093	+	AK026248 NM_025047 BC034354	-164478	+	AB050856 NM_033169 TSC_hg19_v1_chr3_-_160823138 AY359049 BC047618 AK223439 BC028571 AF154848 AK022491 AK095917 NM_001038628 NM_003781 NM_033167 NM_033168	263504	-	AK225664 TSC_hg19_v1_chr3_+_160939097	379663	+	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	379688	+	AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##BC110801|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AK026248|ARL14|80117|ADP-ribosylation factor-like 14##NM_025047|ARL14|80117|ADP-ribosylation factor-like 14##BC034354|ARL14|80117|ADP-ribosylation factor-like 14##AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK225664|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)	0.022365	
chr6	7074087	7074267	reg1029984.p1	4.037	+	BC039678 TSC_hg19_v1_chr6_+_6725205	-349016	+	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	-485227	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-753267	-	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	33649	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	33858	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	34046	+	NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1	0.0	
chr9	136855865	136855932	reg1035125.p2	4.037	+	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-250912	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-252420	-	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-354390	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	1548	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	77295	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	77728	-	BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3	0.0	
chr9	91489427	91489607	reg1036703.p1	4.037	+	BC101432 BC101439 BC101440 BC101442 AK098532 NM_001100111	-222478	-	NM_001161625 NM_145283 BC022521	-339500	+	TSC_hg19_v1_chr9_+_91003988 AK315854	-485519	+	AK094842 NM_001001938 NM_001142413 AK127854 BC144432 BC136895 AY333281	116326	+	TSC_hg19_v1_chr9_+_91606382 AK312798 BC060827 NM_005226	116853	+	DQ896663 TSC_hg19_v1_chr9_-_91793449 D84361	303947	-	BC101432|LOC286238|286238|uncharacterized LOC286238##BC101439|LOC286238|286238|uncharacterized LOC286238##BC101440|LOC286238|286238|uncharacterized LOC286238##BC101442|LOC286238|286238|uncharacterized LOC286238##AK098532|LOC286238|286238|uncharacterized LOC286238##NM_001100111|LOC286238|286238|uncharacterized LOC286238##NM_001161625|NXNL2|158046|nucleoredoxin-like 2##NM_145283|NXNL2|158046|nucleoredoxin-like 2##BC022521|NXNL2|158046|nucleoredoxin-like 2##AK315854|SPIN1|10927|spindlin 1##AK094842|C9orf47|286223|chromosome 9 open reading frame 47##NM_001001938|C9orf47|286223|chromosome 9 open reading frame 47##NM_001142413|C9orf47|286223|chromosome 9 open reading frame 47##AK127854|C9orf47|286223|chromosome 9 open reading frame 47##BC144432|C9orf47|286223|chromosome 9 open reading frame 47##BC136895|C9orf47|286223|chromosome 9 open reading frame 47##AY333281|C9orf47|286223|chromosome 9 open reading frame 47##AK312798|S1PR3|1903|sphingosine-1-phosphate receptor 3##BC060827|S1PR3|1903|sphingosine-1-phosphate receptor 3##NM_005226|S1PR3|1903|sphingosine-1-phosphate receptor 3##DQ896663|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##D84361|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3	0.0	
chrX	108514185	108514336	reg1029962.p1	4.037	+	NM_003604 AF007567	-534638	-	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	-831176	+	BT007228 L22763 U04845 NM_001847 BC005305	-831597	-	NM_001522 L37378	211025	-	AK023289 NM_018698 BC120984 BC120985	264754	+	NM_001242617 TSC_hg19_v1_chrX_+_108780077 AF201942 BC014888 AF212223	265823	+	NM_003604|IRS4|8471|insulin receptor substrate 4##AF007567|IRS4|8471|insulin receptor substrate 4##BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##NM_001522|GUCY2F|2986|guanylate cyclase 2F, retinal##L37378|GUCY2F|2986|guanylate cyclase 2F, retinal##AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2##AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2##BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2##AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2	0.0	
chrX	9431140	9431282	reg1031894.p2	4.037	+	BC120955 BC120956 NM_205849	-430109	-	BC113449 BC143805 NM_001171186 BC112022 AF494343 NM_174951	-661811	-	TSC_hg19_v1_chrX_-_8700193 BC137426 BC137427 M97252 NM_000216 S60085	-731004	-	TSC_hg19_v1_chrX_+_9431357 AK289409 NM_001139466 NM_001139467 NM_001139468 AK290962 BC032708	136	+	TSC_hg19_v1_chrX_+_9433108 Y12781 BC052304 NM_005647	2023	+	Z48804 BC015657 BC068977 NM_000273	302749	-	BC120955|FAM9B|171483|family with sequence similarity 9, member B##BC120956|FAM9B|171483|family with sequence similarity 9, member B##NM_205849|FAM9B|171483|family with sequence similarity 9, member B##BC113449|FAM9A|171482|family with sequence similarity 9, member A##BC143805|FAM9A|171482|family with sequence similarity 9, member A##NM_001171186|FAM9A|171482|family with sequence similarity 9, member A##BC112022|FAM9A|171482|family with sequence similarity 9, member A##AF494343|FAM9A|171482|family with sequence similarity 9, member A##NM_174951|FAM9A|171482|family with sequence similarity 9, member A##BC137426|KAL1|3730|Kallmann syndrome 1 sequence##BC137427|KAL1|3730|Kallmann syndrome 1 sequence##M97252|KAL1|3730|Kallmann syndrome 1 sequence##NM_000216|KAL1|3730|Kallmann syndrome 1 sequence##S60085|KAL1|3730|Kallmann syndrome 1 sequence##AK289409|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139466|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139467|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139468|TBL1X|6907|transducin (beta)-like 1X-linked##AK290962|TBL1X|6907|transducin (beta)-like 1X-linked##BC032708|TBL1X|6907|transducin (beta)-like 1X-linked##Y12781|TBL1X|6907|transducin (beta)-like 1X-linked##BC052304|TBL1X|6907|transducin (beta)-like 1X-linked##NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked##Z48804|GPR143|4935|G protein-coupled receptor 143##BC015657|GPR143|4935|G protein-coupled receptor 143##BC068977|GPR143|4935|G protein-coupled receptor 143##NM_000273|GPR143|4935|G protein-coupled receptor 143	0.075386	
chr20	57444011	57444172	reg1007918.p2	4.036	+	NM_001077490 NM_080425	-16056	+	AJ251759 TSC_hg19_v1_chr20_-_57425958	-18134	-	AF105253 NM_016592 TSC_hg19_v1_chr20_+_57414802	-29293	+	TSC_hg19_v1_chr20_+_57464205 X56009	20103	+	TSC_hg19_v1_chr20_+_57466445 NM_000516 NM_001077488 NM_001077489 NM_080426 AK026564 AK225818 BC008855 BC089157	22266	+	TSC_hg19_v1_chr20_+_57466632 BC108315 BC002722 BC104928 X04408	22523	+	NM_001077490|GNAS|2778|GNAS complex locus##NM_080425|GNAS|2778|GNAS complex locus##AJ251759|GNAS-AS1|149775|GNAS antisense RNA 1 (non-protein coding)##AF105253|GNAS|2778|GNAS complex locus##NM_016592|GNAS|2778|GNAS complex locus##X56009|GNAS|2778|GNAS complex locus##NM_000516|GNAS|2778|GNAS complex locus##NM_001077488|GNAS|2778|GNAS complex locus##NM_001077489|GNAS|2778|GNAS complex locus##NM_080426|GNAS|2778|GNAS complex locus##AK026564|GNAS|2778|GNAS complex locus##AK225818|GNAS|2778|GNAS complex locus##BC008855|GNAS|2778|GNAS complex locus##BC089157|GNAS|2778|GNAS complex locus##BC108315|GNAS|2778|GNAS complex locus##BC002722|GNAS|2778|GNAS complex locus##BC104928|GNAS|2778|GNAS complex locus##X04408|GNAS|2778|GNAS complex locus	0.0	
chr6	137962518	137962698	reg1003304.p1	4.036	+	BC051352 AK096362 NM_175747	-147083	-	TSC_hg19_v1_chr6_-_137540556 NM_000416	-422050	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-422063	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	225929	+	TSC_hg19_v1_chr6_-_138189314 AK124173	226742	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	465960	-	BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector	0.0	
chrX	149218758	149218868	reg1037570.p1	4.036	+	L43575 TSC_hg19_v1_chrX_-_149106661 U66042 NM_001013845	-112131	-	AK313943 NM_001166400 NM_001166401 NM_005364 BC002455 BC012744	-208843	+	AK292272 AK313321 NM_001080790 BC002351 NM_005365	-355218	+	TSC_hg19_v1_chrX_+_149529838 AK302612	311020	+	TSC_hg19_v1_chrX_+_149531583 NM_001177465 AK294478	312749	+	NM_001177466 NM_005491 U46023 BC136324 AB527434 AK315217	394969	+	L43575|CXorf40B|541578|chromosome X open reading frame 40B##U66042|CXorf40B|541578|chromosome X open reading frame 40B##NM_001013845|CXorf40B|541578|chromosome X open reading frame 40B##AK313943|MAGEA8|4107|melanoma antigen family A, 8##NM_001166400|MAGEA8|4107|melanoma antigen family A, 8##NM_001166401|MAGEA8|4107|melanoma antigen family A, 8##NM_005364|MAGEA8|4107|melanoma antigen family A, 8##BC002455|MAGEA8|4107|melanoma antigen family A, 8##BC012744|MAGEA8|4107|melanoma antigen family A, 8##AK292272|MAGEA9|4108|melanoma antigen family A, 9##AK313321|MAGEA9|4108|melanoma antigen family A, 9##NM_001080790|MAGEA9B|728269|melanoma antigen family A, 9B##BC002351|MAGEA9|4108|melanoma antigen family A, 9##NM_005365|MAGEA9|4108|melanoma antigen family A, 9##AK302612|MAMLD1|10046|mastermind-like domain containing 1##NM_001177465|MAMLD1|10046|mastermind-like domain containing 1##AK294478|MAMLD1|10046|mastermind-like domain containing 1##NM_001177466|MAMLD1|10046|mastermind-like domain containing 1##NM_005491|MAMLD1|10046|mastermind-like domain containing 1##U46023|MAMLD1|10046|mastermind-like domain containing 1##BC136324|MAMLD1|10046|mastermind-like domain containing 1##AK315217|MAMLD1|10046|mastermind-like domain containing 1	0.68391	CTCF.p2:7:0.684
chrX	24856879	24856986	reg1030260.p1	4.036	+	NM_016937 X06745 TSC_hg19_v1_chrX_+_24712066	-144867	+	TSC_hg19_v1_chrX_+_24712045 BX648513	-144882	+	TSC_hg19_v1_chrX_-_24690740 BC045634 AK296333 AK226121 NM_001163264	-166073	-	BC169334 TSC_hg19_v1_chrX_-_25031209	174261	-	NM_139058 TSC_hg19_v1_chrX_-_25034074	177141	-	NM_173699 BC029525 AK057361	1299554	+	NM_016937|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##X06745|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##BX648513|POLA1|5422|polymerase (DNA directed), alpha 1, catalytic subunit##BC045634|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AK296333|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##AK226121|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##NM_001163264|PCYT1B|9468|phosphate cytidylyltransferase 1, choline, beta##BC169334|ARX|170302|aristaless related homeobox##NM_139058|ARX|170302|aristaless related homeobox##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18	0.99323	CTCF.p2:4:0.993
chr10	105668103	105668226	reg1033493.p1	4.035	+	TSC_hg19_v1_chr10_-_105615306 NM_014631	-52894	-	TSC_hg19_v1_chr10_-_105452931 AK294736 AK295314 AK315983 AK295660	-215214	-	TSC_hg19_v1_chr10_-_105437934 AK304828	-230243	-	TSC_hg19_v1_chr10_-_105677943 BC017400	9765	-	TSC_hg19_v1_chr10_-_105677986 NM_024928	9851	-	TSC_hg19_v1_chr10_+_105726926 AK307389	58722	+	NM_014631|SH3PXD2A|9644|SH3 and PX domains 2A##AK294736|SH3PXD2A|9644|SH3 and PX domains 2A##AK295314|SH3PXD2A|9644|SH3 and PX domains 2A##AK315983|SH3PXD2A|9644|SH3 and PX domains 2A##AK295660|SH3PXD2A|9644|SH3 and PX domains 2A##AK304828|SH3PXD2A|9644|SH3 and PX domains 2A##BC017400|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1##NM_024928|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1##AK307389|SLK|9748|STE20-like kinase	0.036678	
chr11	59382168	59382263	reg1032401.p2	4.035	+	NM_001004711	-99830	+	NM_001004706	-111167	+	BC136893 BC136894 NM_001004705	-137342	+	TSC_hg19_v1_chr11_-_59383172 BC051350 BC063121	954	-	TSC_hg19_v1_chr11_-_59383232 BC011581	995	-	AF185696 M86917 NM_002556	1401	-	NM_001004711|OR4D9|390199|olfactory receptor, family 4, subfamily D, member 9##NM_001004706|OR4D11|219986|olfactory receptor, family 4, subfamily D, member 11##BC136893|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##BC136894|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##NM_001004705|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##BC051350|OSBP|5007|oxysterol binding protein##BC063121|OSBP|5007|oxysterol binding protein##BC011581|OSBP|5007|oxysterol binding protein##AF185696|OSBP|5007|oxysterol binding protein##M86917|OSBP|5007|oxysterol binding protein##NM_002556|OSBP|5007|oxysterol binding protein	0.0	
chr11	68694848	68694952	reg1033854.p2	4.035	+	TSC_hg19_v1_chr11_+_68671384 AB208802 BC105088 BC105090 BC015666 BC062312 BC000290	-23498	+	TSC_hg19_v1_chr11_+_68671358 AK312565 L14754 BC025299 BC052278 BC080519	-23535	+	TSC_hg19_v1_chr11_+_68671350 BC041808	-23565	+	AB154410 AB463856 AY427820 NM_198923	53554	-	BC016964 AK098317 TSC_hg19_v1_chr11_-_68780715 AK293469 AK075492 AK122669 AK131068 AK075450 NM_001098515 NM_145015	85858	-	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	121450	+	AB208802|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC105088|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC105090|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC015666|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC062312|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC000290|IGHMBP2|3508|immunoglobulin mu binding protein 2##AK312565|IGHMBP2|3508|immunoglobulin mu binding protein 2##L14754|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC025299|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC052278|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC080519|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC041808|IGHMBP2|3508|immunoglobulin mu binding protein 2##AB154410|MRGPRD|116512|MAS-related GPR, member D##AY427820|MRGPRD|116512|MAS-related GPR, member D##NM_198923|MRGPRD|116512|MAS-related GPR, member D##BC016964|MRGPRF|116535|MAS-related GPR, member F##AK098317|MRGPRF|116535|MAS-related GPR, member F##AK293469|MRGPRF|116535|MAS-related GPR, member F##AK075492|MRGPRF|116535|MAS-related GPR, member F##AK122669|MRGPRF|116535|MAS-related GPR, member F##AK131068|MRGPRF|116535|MAS-related GPR, member F##AK075450|MRGPRF|116535|MAS-related GPR, member F##NM_001098515|MRGPRF|116535|MAS-related GPR, member F##NM_145015|MRGPRF|116535|MAS-related GPR, member F##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2	0.0	
chr12	25151088	25151204	reg1032833.p2	4.035	+	BC035880 NM_001101339 BC046192 BC062789	-734	-	TSC_hg19_v1_chr12_-_25102303 AK056255 NM_001178091 NM_001178092 NM_005504	-48810	-	TSC_hg19_v1_chr12_-_25102021 BX647122 AK128527	-49126	-	NM_001204126 NM_001204127 NM_006152	54034	+	TSC_hg19_v1_chr12_+_25205520 BC029391 AK303103 AK303256 BC126417 BC144164 BC144165 BC144170	54434	+	BC028415 AK297998 AK302235 AK301763 AK093102 AX747924 BC031047 BC047415 BC057795 NM_001082972 NM_001082973 NM_001204101 NM_001204102 NM_018272 AK304602	196917	-	BC035880|C12orf77|196415|chromosome 12 open reading frame 77##NM_001101339|C12orf77|196415|chromosome 12 open reading frame 77##BC046192|C12orf77|196415|chromosome 12 open reading frame 77##BC062789|C12orf77|196415|chromosome 12 open reading frame 77##AK056255|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178091|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001178092|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_005504|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##BX647122|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##AK128527|BCAT1|586|branched chain amino-acid transaminase 1, cytosolic##NM_001204126|LRMP|4033|lymphoid-restricted membrane protein##NM_001204127|LRMP|4033|lymphoid-restricted membrane protein##NM_006152|LRMP|4033|lymphoid-restricted membrane protein##BC029391|LRMP|4033|lymphoid-restricted membrane protein##AK303103|LRMP|4033|lymphoid-restricted membrane protein##AK303256|LRMP|4033|lymphoid-restricted membrane protein##BC126417|LRMP|4033|lymphoid-restricted membrane protein##BC144164|LRMP|4033|lymphoid-restricted membrane protein##BC144165|LRMP|4033|lymphoid-restricted membrane protein##BC144170|LRMP|4033|lymphoid-restricted membrane protein##BC028415|CASC1|55259|cancer susceptibility candidate 1##AK297998|CASC1|55259|cancer susceptibility candidate 1##AK302235|CASC1|55259|cancer susceptibility candidate 1##AK301763|CASC1|55259|cancer susceptibility candidate 1##AK093102|CASC1|55259|cancer susceptibility candidate 1##BC031047|CASC1|55259|cancer susceptibility candidate 1##BC047415|CASC1|55259|cancer susceptibility candidate 1##BC057795|CASC1|55259|cancer susceptibility candidate 1##NM_001082972|CASC1|55259|cancer susceptibility candidate 1##NM_001082973|CASC1|55259|cancer susceptibility candidate 1##NM_001204101|CASC1|55259|cancer susceptibility candidate 1##NM_001204102|CASC1|55259|cancer susceptibility candidate 1##NM_018272|CASC1|55259|cancer susceptibility candidate 1##AK304602|CASC1|55259|cancer susceptibility candidate 1	0.0	
chr1	230909019	230909137	reg1038205.p1	4.035	+	AF022799 NM_006615 AK313629 AB038463 NM_016452 BC027993 AK298024	-25919	+	NM_000029	-58743	-	TSC_hg19_v1_chr1_-_230849965 AK312291	-59109	-	AK292433 NM_001136495	82703	-	AL713769 TSC_hg19_v1_chr1_-_231004090	94992	-	TSC_hg19_v1_chr1_-_231004271 AK027431 BC066649 NM_032800	95188	-	AF022799|CAPN9|10753|calpain 9##NM_006615|CAPN9|10753|calpain 9##AK313629|CAPN9|10753|calpain 9##AB038463|CAPN9|10753|calpain 9##NM_016452|CAPN9|10753|calpain 9##BC027993|CAPN9|10753|calpain 9##AK298024|CAPN9|10753|calpain 9##NM_000029|AGT|183|angiotensinogen (serpin peptidase inhibitor, clade A, member 8)##AK312291|AGT|183|angiotensinogen (serpin peptidase inhibitor, clade A, member 8)##AK292433|C1orf198|84886|chromosome 1 open reading frame 198##NM_001136495|C1orf198|84886|chromosome 1 open reading frame 198##AL713769|C1orf198|84886|chromosome 1 open reading frame 198##AK027431|C1orf198|84886|chromosome 1 open reading frame 198##BC066649|C1orf198|84886|chromosome 1 open reading frame 198##NM_032800|C1orf198|84886|chromosome 1 open reading frame 198	0.872493	CTCF.p2:-3:0.848
chr17	43348311	43348429	reg1035771.p2	4.035	+	BC028124 AF433663 AK302184 AK058143 NM_152343	-8915	-	TSC_hg19_v1_chr17_+_43325300 AK311429	-23066	+	AK096807 TSC_hg19_v1_chr17_-_43319268	-29174	-	TSC_hg19_v1_chr17_-_43394387 BC035576 BC022296 AK290203 AK313085 NM_003954	46005	-	TSC_hg19_v1_chr17_-_43487753 AK092891 AX747793 AK300880	139380	-	TSC_hg19_v1_chr17_-_43503000 AK125535 NM_199282	154631	-	BC028124|C17orf46|124783|chromosome 17 open reading frame 46##AF433663|C17orf46|124783|chromosome 17 open reading frame 46##AK302184|C17orf46|124783|chromosome 17 open reading frame 46##AK058143|C17orf46|124783|chromosome 17 open reading frame 46##NM_152343|C17orf46|124783|chromosome 17 open reading frame 46##AK311429|LOC100133991|100133991|uncharacterized LOC100133991##BC035576|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC022296|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK290203|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK313085|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##NM_003954|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK092891|ARHGAP27|201176|Rho GTPase activating protein 27##AK300880|ARHGAP27|201176|Rho GTPase activating protein 27##AK125535|ARHGAP27|201176|Rho GTPase activating protein 27##NM_199282|ARHGAP27|201176|Rho GTPase activating protein 27	0.929634	CTCF.p2:26:0.930
chr18	46444287	46444449	reg1025836.p1	4.035	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-378595	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-508659	-	AM988836 AK296709 NM_001039360 EF120357	-780669	-	AK131394 NM_001190823	24779	-	AK301535 NM_001190822	31334	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	32399	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.0	
chr3	127787080	127787176	reg1034703.p2	4.035	+	TSC_hg19_v1_chr3_+_127771342 AB528869	-15762	+	TSC_hg19_v1_chr3_+_127771307 AF346602	-15806	+	TSC_hg19_v1_chr3_+_127771300 AL832821 BC002951 AF077032 AF084458	-15832	+	AB451224 AB451347 AB590226 BT007057 DQ469310 DQ891448 DQ894627 BC012886 TSC_hg19_v1_chr3_-_127842656 AB012122 AF099084 BC000519 BC002993 AF070735 AJ010058 AK222575 Y18418 AK222563 AK312290 NM_003707	55495	-	TSC_hg19_v1_chr3_+_127872314 NM_021937	85181	+	TSC_hg19_v1_chr3_+_127872325 BC007933 AF268872	85310	+	AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AL832821|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##BC002951|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF077032|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF084458|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AB451224|RUVBL1|8607|RuvB-like 1 (E. coli)##AB451347|RUVBL1|8607|RuvB-like 1 (E. coli)##BT007057|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ469310|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ891448|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ894627|RUVBL1|8607|RuvB-like 1 (E. coli)##BC012886|RUVBL1|8607|RuvB-like 1 (E. coli)##AB012122|RUVBL1|8607|RuvB-like 1 (E. coli)##AF099084|RUVBL1|8607|RuvB-like 1 (E. coli)##BC002993|RUVBL1|8607|RuvB-like 1 (E. coli)##AF070735|RUVBL1|8607|RuvB-like 1 (E. coli)##AJ010058|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222575|RUVBL1|8607|RuvB-like 1 (E. coli)##Y18418|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222563|RUVBL1|8607|RuvB-like 1 (E. coli)##AK312290|RUVBL1|8607|RuvB-like 1 (E. coli)##NM_003707|RUVBL1|8607|RuvB-like 1 (E. coli)##NM_021937|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##BC007933|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AF268872|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific	0.952711	CTCF.p2:-15:0.953
chr1	153744507	153744623	reg1034825.p1	4.034	+	TSC_hg19_v1_chr1_+_153700548 BX640950 CR749376 CR627233 BC116458 AK290025 CR749212 BX640786 NM_023015	-44012	+	TSC_hg19_v1_chr1_+_153651222 BC063304 AK025024 NM_000906 X15357	-93269	+	TSC_hg19_v1_chr1_-_153643490 NM_004515	-101075	-	BC003041 BC009916 NM_024330 AK075377 TSC_hg19_v1_chr1_+_153747897 AK123997 AY358409 AK074134 DQ893429 DQ895951 AK027499 BC029792	3301	+	AK094665 NM_020699 TSC_hg19_v1_chr1_-_153895452	150886	-	TSC_hg19_v1_chr1_-_153919148 AB007945 NM_014856	174581	-	BX640950|INTS3|65123|integrator complex subunit 3##CR749376|INTS3|65123|integrator complex subunit 3##CR627233|INTS3|65123|integrator complex subunit 3##BC116458|INTS3|65123|integrator complex subunit 3##AK290025|INTS3|65123|integrator complex subunit 3##CR749212|INTS3|65123|integrator complex subunit 3##BX640786|INTS3|65123|integrator complex subunit 3##NM_023015|INTS3|65123|integrator complex subunit 3##BC063304|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##AK025024|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##NM_000906|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##X15357|NPR1|4881|natriuretic peptide receptor A/guanylate cyclase A (atrionatriuretic peptide receptor A)##NM_004515|ILF2|3608|interleukin enhancer binding factor 2, 45kDa##BC003041|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC009916|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##NM_024330|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK075377|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK123997|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AY358409|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK074134|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ893429|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ895951|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK027499|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC029792|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B##NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B##AB007945|DENND4B|9909|DENN/MADD domain containing 4B##NM_014856|DENND4B|9909|DENN/MADD domain containing 4B	0.873445	CTCF.p2:4:0.873
chr1	165655486	165655604	reg1033899.p1	4.034	+	TSC_hg19_v1_chr1_+_165600499 BC005964 DQ185045 AK312103 AF026977 AK223012 BC000505	-55074	+	NM_004528	-55436	+	TSC_hg19_v1_chr1_+_165513441 NM_001005214 BC132981 BC132983	-142073	+	TSC_hg19_v1_chr1_-_165667539 AK302191 AK302183 X75425 U50203	12043	-	AF172093 TSC_hg19_v1_chr1_-_165667800 BC011410 AK301767 AK302654 AK312751 BC070030 AK293520	12233	-	TSC_hg19_v1_chr1_-_165667837 BC151140 BC151141 NM_000696	12322	-	BC005964|MGST3|4259|microsomal glutathione S-transferase 3##DQ185045|MGST3|4259|microsomal glutathione S-transferase 3##AK312103|MGST3|4259|microsomal glutathione S-transferase 3##AF026977|MGST3|4259|microsomal glutathione S-transferase 3##AK223012|MGST3|4259|microsomal glutathione S-transferase 3##BC000505|MGST3|4259|microsomal glutathione S-transferase 3##NM_004528|MGST3|4259|microsomal glutathione S-transferase 3##NM_001005214|LRRC52|440699|leucine rich repeat containing 52##BC132981|LRRC52|440699|leucine rich repeat containing 52##BC132983|LRRC52|440699|leucine rich repeat containing 52##AK302191|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK302183|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##X75425|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##U50203|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AF172093|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##BC011410|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK301767|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK302654|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK312751|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##BC070030|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##AK293520|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##BC151140|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##BC151141|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1##NM_000696|ALDH9A1|223|aldehyde dehydrogenase 9 family, member A1	0.0	
chr16	67048049	67048230	reg1024003.p2	4.034	+	NM_001190201 NM_001190202 TSC_hg19_v1_chr16_+_67034441 AK094783 AK300792 AK295483 BC041823 BC064573	-13591	+	AK293061 NM_173815 AK296064	-25610	+	AK025389 NM_001185176	-46762	+	TSC_hg19_v1_chr16_+_67063051 BC018509 NM_001755 NM_022845	14908	+	TSC_hg19_v1_chr16_+_67063217 AK290462 AK291834 AB463544 AF294326 BT006862 CU676254 DQ890558 DQ893719 L20298 AK311724	15149	+	TSC_hg19_v1_chr16_+_67143864 AF176088 BC004556 NM_025187	95715	+	NM_001190201|CES4A|283848|carboxylesterase 4A##NM_001190202|CES4A|283848|carboxylesterase 4A##AK094783|CES4A|283848|carboxylesterase 4A##AK300792|CES4A|283848|carboxylesterase 4A##AK295483|CES4A|283848|carboxylesterase 4A##BC041823|CES4A|283848|carboxylesterase 4A##BC064573|CES4A|283848|carboxylesterase 4A##AK293061|CES4A|283848|carboxylesterase 4A##NM_173815|CES4A|283848|carboxylesterase 4A##AK296064|CES4A|283848|carboxylesterase 4A##AK025389|CES3|23491|carboxylesterase 3##NM_001185176|CES3|23491|carboxylesterase 3##BC018509|CBFB|865|core-binding factor, beta subunit##NM_001755|CBFB|865|core-binding factor, beta subunit##NM_022845|CBFB|865|core-binding factor, beta subunit##AK290462|CBFB|865|core-binding factor, beta subunit##AK291834|CBFB|865|core-binding factor, beta subunit##AF294326|CBFB|865|core-binding factor, beta subunit##BT006862|CBFB|865|core-binding factor, beta subunit##DQ890558|CBFB|865|core-binding factor, beta subunit##DQ893719|CBFB|865|core-binding factor, beta subunit##L20298|CBFB|865|core-binding factor, beta subunit##AK311724|CBFB|865|core-binding factor, beta subunit##AF176088|C16orf70|80262|chromosome 16 open reading frame 70##BC004556|C16orf70|80262|chromosome 16 open reading frame 70##NM_025187|C16orf70|80262|chromosome 16 open reading frame 70	0.0	
chr2	45241342	45241455	reg1031988.p1	4.034	+	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	-4848	-	AJ012611 NM_005413 AL162671	-72352	+	NM_024766 TSC_hg19_v1_chr2_+_44589085 BC029359 AK027104 BC053733	-652306	+	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	553730	-	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	597009	-	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	637676	+	BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AJ012611|SIX3|6496|SIX homeobox 3##NM_005413|SIX3|6496|SIX homeobox 3##AL162671|SIX3|6496|SIX homeobox 3##NM_024766|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC029359|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK027104|CAMKMT|79823|calmodulin-lysine N-methyltransferase##BC053733|CAMKMT|79823|calmodulin-lysine N-methyltransferase##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon	0.127152	
chr8	126131290	126131386	reg1006170.p2	4.034	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-27241	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-27281	-	TSC_hg19_v1_chr8_-_126104024 AK296970	-27316	-	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	311241	+	TSC_hg19_v1_chr8_-_126963395 BX648371	832075	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	1439217	-	NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##AK296970|KIAA0196|9897|KIAA0196##BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B	0.0	
chr10	119423389	119423569	reg1031509.p2	4.033	+	TSC_hg19_v1_chr10_+_119302713 AB463605	-120736	+	AF301598 NM_001165924 NM_004098	-121524	+	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	-121563	-	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	382565	-	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	382951	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	678345	-	AF301598|EMX2|2018|empty spiracles homeobox 2##NM_001165924|EMX2|2018|empty spiracles homeobox 2##NM_004098|EMX2|2018|empty spiracles homeobox 2##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A	0.0	
chr11	87589285	87589377	reg1033112.p1	4.033	+	AK024853 TSC_hg19_v1_chr11_+_87032449	-556889	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	-840353	+	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	-922943	-	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	319261	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	481536	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	481571	-	AK024853|TMEM135|65084|transmembrane protein 135##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C	0.952691	CTCF.p2:3:0.953
chr14	54168378	54168494	reg1025449.p2	4.033	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-548386	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-548468	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-548563	-	NM_130851	252833	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	255097	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	695285	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.0	
chr16	21866874	21867015	reg1036732.p2	4.033	+	AK316459 AK296301 AK303500 AK301703 AK294452 TSC_hg19_v1_chr16_-_21854901	-12116	-	BC009198 BC068999 TSC_hg19_v1_chr16_-_21831777 BC070157	-35184	-	AK093062 AX747895 NM_170664 BC040551 AK302733	-150627	+	NM_003366 AK307535 TSC_hg19_v1_chr16_+_21964618	97684	+	TSC_hg19_v1_chr16_+_21964679 J04973 BC003136	97741	+	TSC_hg19_v1_chr16_+_21964701 AB587386 DQ891390 DQ894565	97777	+	AK316459|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296301|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AK303500|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK301703|LOC613037|613037|nuclear pore complex interacting protein pseudogene##AK294452|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BC009198|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC068999|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##BC070157|RRN3P1|730092|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1##AK093062|OTOA|146183|otoancorin##NM_170664|OTOA|146183|otoancorin##BC040551|OTOA|146183|otoancorin##AK302733|OTOA|146183|otoancorin##NM_003366|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##AK307535|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##J04973|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##BC003136|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##DQ891390|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##DQ894565|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II	0.0	
chr20	46097336	46097482	reg1034084.p2	4.033	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-111921	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-120762	-	TSC_hg19_v1_chr20_-_45927496 BC030721	-169840	-	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	33213	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	33275	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	317343	-	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2	0.0	
chr22	39854744	39854818	reg1036248.p2	4.033	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	-1245	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	-1461	+	TSC_hg19_v1_chr22_+_39795812 AK291668 AK316004 AK308903 AB591024 CU690722	-58970	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	28509	+	TSC_hg19_v1_chr22_+_39898257 NM_019008	43484	+	TSC_hg19_v1_chr22_+_39898332 AL834205	43529	+	BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK291668|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK316004|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK308903|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_019008|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL834205|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like	0.30063	CTCF.p2:64:0.301
chr2	8393627	8393736	reg1025681.p2	4.033	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1336094	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1375818	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1386978	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	428522	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	584038	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	750140	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr2	96811033	96811196	reg1033233.p1	4.033	+	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	-160	-	BC107126 AJ537600 BC107127 NM_001002036	-6941	-	NM_000682 AB527942 BC133021 BC136537	-29179	-	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	45	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	62941	-	TSC_hg19_v1_chr2_+_96874144 AK311432	63040	+	EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.0	
chr8	38042161	38042243	reg1012611.p2	4.033	+	TSC_hg19_v1_chr8_+_38034377 AF111116	-7814	+	TSC_hg19_v1_chr8_+_38034355 BC038505 AK304072 AK314020 AF095194	-7877	+	TSC_hg19_v1_chr8_-_38034212 NM_014462	-7973	-	NM_001164234 NM_015214 TSC_hg19_v1_chr8_+_38089102 AK056525	46881	+	TSC_hg19_v1_chr8_+_38089233 AK125904 NM_001164232	47115	+	BC033025 AK292118 TSC_hg19_v1_chr8_-_38126733 AF212238 BC106014 NM_001102559 NM_001102560 NM_032483	84514	-	AF111116|BAG4|9530|BCL2-associated athanogene 4##BC038505|BAG4|9530|BCL2-associated athanogene 4##AK304072|BAG4|9530|BCL2-associated athanogene 4##AK314020|BAG4|9530|BCL2-associated athanogene 4##AF095194|BAG4|9530|BCL2-associated athanogene 4##NM_014462|LSM1|27257|LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001164234|DDHD2|23259|DDHD domain containing 2##NM_015214|DDHD2|23259|DDHD domain containing 2##AK056525|DDHD2|23259|DDHD domain containing 2##AK125904|DDHD2|23259|DDHD domain containing 2##NM_001164232|DDHD2|23259|DDHD domain containing 2##BC033025|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##AK292118|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##AF212238|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##BC106014|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##NM_001102559|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##NM_001102560|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B##NM_032483|PPAPDC1B|84513|phosphatidic acid phosphatase type 2 domain containing 1B	0.0	
chr8	75425049	75425160	reg1036095.p2	4.033	+	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	-162414	+	BX537756 BC139832 BC098299 BC098314 BC099736 BC113856 BC114464 NM_020647 BC140875 BC140876	-191576	-	NM_001195797 NM_015364 BC020690 AF168121 AB590737 AB446498	-521484	+	CR749657 NM_015886	311667	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	471805	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	895084	+	AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BX537756|JPH1|56704|junctophilin 1##BC139832|JPH1|56704|junctophilin 1##BC098299|JPH1|56704|junctophilin 1##BC098314|JPH1|56704|junctophilin 1##BC099736|JPH1|56704|junctophilin 1##BC113856|JPH1|56704|junctophilin 1##BC114464|JPH1|56704|junctophilin 1##NM_020647|JPH1|56704|junctophilin 1##BC140875|JPH1|56704|junctophilin 1##BC140876|JPH1|56704|junctophilin 1##NM_001195797|LY96|23643|lymphocyte antigen 96##NM_015364|LY96|23643|lymphocyte antigen 96##BC020690|LY96|23643|lymphocyte antigen 96##AF168121|LY96|23643|lymphocyte antigen 96##AB446498|LY96|23643|lymphocyte antigen 96##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma	0.147013	
chr11	82206066	82206211	reg1034122.p1	4.032	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-3054414	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-3920243	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-3920346	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	238760	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	405379	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	406636	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.204489	CTCF.p2:14:0.204
chr1	200227682	200227806	reg1029915.p1	4.032	+	NM_001105517	-45089	+	AK316513 TSC_hg19_v1_chr1_+_200011716	-216020	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	-230875	+	AK021707 TSC_hg19_v1_chr1_-_200377270	149525	-	TSC_hg19_v1_chr1_-_200377488 AK022921	149794	-	AB384788 CU687444 AF125158 BC051905 TSC_hg19_v1_chr1_-_200378976	151165	-	NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK021707|ZNF281|23528|zinc finger protein 281##AK022921|ZNF281|23528|zinc finger protein 281##AF125158|ZNF281|23528|zinc finger protein 281##BC051905|ZNF281|23528|zinc finger protein 281	0.324769	CTCF.p2:3:0.325
chr13	24385145	24385278	reg1035167.p2	4.032	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	-231679	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-240756	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-377371	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	77805	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	78303	-	NM_001135816 BC142999	78381	+	BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.0	
chr14	71865747	71865856	reg1027932.p1	4.032	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-491350	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-491668	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-589992	-	AF090989 AF090990 NM_015556	130240	+	AK294895 NM_001204423	533015	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	533352	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.0	
chr15	31731287	31731468	reg1001849.p1	4.032	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-112039	+	NM_001243538	-208328	-	GQ502181 HM135791 NM_001252020	-277949	-	AJ430383 NM_130901	216164	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	431452	-	TSC_hg19_v1_chr15_-_32162898 AK126002	431566	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr16	30255054	30255201	reg1036766.p1	4.032	+	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	-44559	+	BC022832 NM_001031827 NM_001039182	-49501	-	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	-49934	+	TSC_hg19_v1_chr16_-_30346695 AK289905 BC063703	91572	-	BC013854 NM_001243646	111127	-	AK315708 TSC_hg19_v1_chr16_-_30366603 BC000495 BC001947 AF104222	111473	-	AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK289905|LOC595101|595101|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene##BC063703|LOC595101|595101|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene##BC013854|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##NM_001243646|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##AK315708|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##BC000495|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##BC001947|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##AF104222|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2	0.0	
chr18	57364616	57364756	reg1036627.p1	4.032	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-36	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	-95	-	TSC_hg19_v1_chr18_-_57026487 DQ891254 DQ894440 U09716 AK223208 AK225108 AK312869 BC008401 BC032330 BC017858 X71661 AK301244 NM_005570	-338200	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	202543	+	AK314130 NM_005912	675314	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1793088	+	NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##DQ891254|LMAN1|3998|lectin, mannose-binding, 1##DQ894440|LMAN1|3998|lectin, mannose-binding, 1##U09716|LMAN1|3998|lectin, mannose-binding, 1##AK223208|LMAN1|3998|lectin, mannose-binding, 1##AK225108|LMAN1|3998|lectin, mannose-binding, 1##AK312869|LMAN1|3998|lectin, mannose-binding, 1##BC008401|LMAN1|3998|lectin, mannose-binding, 1##BC032330|LMAN1|3998|lectin, mannose-binding, 1##BC017858|LMAN1|3998|lectin, mannose-binding, 1##X71661|LMAN1|3998|lectin, mannose-binding, 1##AK301244|LMAN1|3998|lectin, mannose-binding, 1##NM_005570|LMAN1|3998|lectin, mannose-binding, 1##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2	0.978645	CTCF.p2:-17:0.979
chr22	32809889	32809984	reg1035810.p1	4.032	+	TSC_hg19_v1_chr22_-_32808253 AK301945 NM_014306	-1678	-	AK297826 AK297908 BC016707 TSC_hg19_v1_chr22_-_32808235 AK312503 AF161466	-1700	-	CR457175 CU677691 CU678324 AB527121 CU013001 CU013289 DQ890931 DQ894092 CR456450 BC000151 BC002970 AL050255 TSC_hg19_v1_chr22_-_32808224 BC010308 AF155658	-1751	-	AF465766 BC131582 NM_174932	43436	-	TSC_hg19_v1_chr22_+_32870699 NM_012179 BC008361	60768	+	TSC_hg19_v1_chr22_+_32870797 AL050254 AK226087	60836	+	AK301945|C22orf28|51493|chromosome 22 open reading frame 28##NM_014306|C22orf28|51493|chromosome 22 open reading frame 28##AK297826|C22orf28|51493|chromosome 22 open reading frame 28##AK297908|C22orf28|51493|chromosome 22 open reading frame 28##BC016707|C22orf28|51493|chromosome 22 open reading frame 28##AK312503|C22orf28|51493|chromosome 22 open reading frame 28##AF161466|C22orf28|51493|chromosome 22 open reading frame 28##CR457175|C22orf28|51493|chromosome 22 open reading frame 28##DQ890931|C22orf28|51493|chromosome 22 open reading frame 28##DQ894092|C22orf28|51493|chromosome 22 open reading frame 28##CR456450|C22orf28|51493|chromosome 22 open reading frame 28##BC000151|C22orf28|51493|chromosome 22 open reading frame 28##BC002970|C22orf28|51493|chromosome 22 open reading frame 28##AL050255|C22orf28|51493|chromosome 22 open reading frame 28##BC010308|C22orf28|51493|chromosome 22 open reading frame 28##AF155658|C22orf28|51493|chromosome 22 open reading frame 28##AF465766|BPIFC|254240|BPI fold containing family C##BC131582|BPIFC|254240|BPI fold containing family C##NM_174932|BPIFC|254240|BPI fold containing family C##NM_012179|FBXO7|25793|F-box protein 7##BC008361|FBXO7|25793|F-box protein 7##AL050254|FBXO7|25793|F-box protein 7##AK226087|FBXO7|25793|F-box protein 7	0.034458	
chr6	7202377	7202543	reg1034956.p2	4.032	+	BX647723 TSC_hg19_v1_chr6_+_7108910	-93557	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	-94237	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	-94425	+	BT007387 CR456961 AB464204 DQ892751 EU176743 TSC_hg19_v1_chr6_-_7313433 Z12830 AK075562 AK222762 AK222809 AK291550 AK312653 CR936719 BC007710 NM_003144	110986	-	AF414185 NM_001170692 NM_001170693 NM_205864 TSC_hg19_v1_chr6_-_7389974	187507	-	TSC_hg19_v1_chr6_+_7390042 AY094356 AK314467 BC006104 NM_031480 AK054568	187638	+	BX647723|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##BT007387|SSR1|6745|signal sequence receptor, alpha##CR456961|SSR1|6745|signal sequence receptor, alpha##DQ892751|SSR1|6745|signal sequence receptor, alpha##EU176743|SSR1|6745|signal sequence receptor, alpha##Z12830|SSR1|6745|signal sequence receptor, alpha##AK075562|SSR1|6745|signal sequence receptor, alpha##AK222762|SSR1|6745|signal sequence receptor, alpha##AK222809|SSR1|6745|signal sequence receptor, alpha##AK291550|SSR1|6745|signal sequence receptor, alpha##AK312653|SSR1|6745|signal sequence receptor, alpha##CR936719|SSR1|6745|signal sequence receptor, alpha##BC007710|SSR1|6745|signal sequence receptor, alpha##NM_003144|SSR1|6745|signal sequence receptor, alpha##AF414185|CAGE1|285782|cancer antigen 1##NM_001170692|CAGE1|285782|cancer antigen 1##NM_001170693|CAGE1|285782|cancer antigen 1##NM_205864|CAGE1|285782|cancer antigen 1##AY094356|RIOK1|83732|RIO kinase 1 (yeast)##AK314467|RIOK1|83732|RIO kinase 1 (yeast)##BC006104|RIOK1|83732|RIO kinase 1 (yeast)##NM_031480|RIOK1|83732|RIO kinase 1 (yeast)##AK054568|RIOK1|83732|RIO kinase 1 (yeast)	0.0	
chr10	36964304	36964399	reg1036614.p1	4.031	+	AB587328 AB043703 NM_031866	-1033992	-	AK074504 NM_153368	-1070014	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	-1338557	+	AF269087 NM_052997	450433	+	NM_001190489	927507	-	BC132915 BC132917 BC110869 BC021819 AJ491695 AJ492196 NM_021045 TSC_hg19_v1_chr10_-_38146539	1182067	-	AB043703|FZD8|8325|frizzled family receptor 8##NM_031866|FZD8|8325|frizzled family receptor 8##AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AF269087|ANKRD30A|91074|ankyrin repeat domain 30A##NM_052997|ANKRD30A|91074|ankyrin repeat domain 30A##NM_001190489|MTRNR2L7|100288485|MT-RNR2-like 7##BC132915|ZNF248|57209|zinc finger protein 248##BC132917|ZNF248|57209|zinc finger protein 248##BC110869|ZNF248|57209|zinc finger protein 248##BC021819|ZNF248|57209|zinc finger protein 248##AJ491695|ZNF248|57209|zinc finger protein 248##AJ492196|ZNF248|57209|zinc finger protein 248##NM_021045|ZNF248|57209|zinc finger protein 248	0.0	
chr10	77846824	77846963	reg1038355.p1	4.031	+	AF267860 NM_032024	-304375	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-685328	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-685412	-	AF118141 TSC_hg19_v1_chr10_-_79397246	1550332	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	1550443	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	1550513	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.0	
chr1	167657041	167657220	reg1001047.p1	4.031	+	TSC_hg19_v1_chr1_+_167599557 AL137762 BC101536 BC101562 BC143428	-57561	+	AF545852 TSC_hg19_v1_chr1_+_167599495 NM_052862 AK130798	-57717	+	TSC_hg19_v1_chr1_-_167523043 NM_003851	-134067	-	TSC_hg19_v1_chr1_+_167691226 NM_001146191 NM_003953 NM_024569 AK297112 AK075334 AK307250 AK291249 AY359019 AF181660 AF478447 BC000984 BC007881 AF095727 AF087020 AF092425 AF095726 AK315546 AB527648 AF239756 BT019542 CR542160 HQ447352	34198	+	BC117366 BC117372 AF176813 AF299350 AF331033 AK310395 AK310531 AK302884 NM_001167749 NM_018417	226217	-	AB528078 AM393085 CR407632 CR533473 TSC_hg19_v1_chr1_-_167905197 BC104157 BC104158	248012	-	AL137762|RCSD1|92241|RCSD domain containing 1##BC101536|RCSD1|92241|RCSD domain containing 1##BC101562|RCSD1|92241|RCSD domain containing 1##BC143428|RCSD1|92241|RCSD domain containing 1##AF545852|RCSD1|92241|RCSD domain containing 1##NM_052862|RCSD1|92241|RCSD domain containing 1##NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1##NM_001146191|MPZL1|9019|myelin protein zero-like 1##NM_003953|MPZL1|9019|myelin protein zero-like 1##NM_024569|MPZL1|9019|myelin protein zero-like 1##AK297112|MPZL1|9019|myelin protein zero-like 1##AK075334|MPZL1|9019|myelin protein zero-like 1##AK307250|MPZL1|9019|myelin protein zero-like 1##AK291249|MPZL1|9019|myelin protein zero-like 1##AY359019|MPZL1|9019|myelin protein zero-like 1##AF181660|MPZL1|9019|myelin protein zero-like 1##AF478447|MPZL1|9019|myelin protein zero-like 1##BC000984|MPZL1|9019|myelin protein zero-like 1##BC007881|MPZL1|9019|myelin protein zero-like 1##AF095727|MPZL1|9019|myelin protein zero-like 1##AF087020|MPZL1|9019|myelin protein zero-like 1##AF092425|MPZL1|9019|myelin protein zero-like 1##AF095726|MPZL1|9019|myelin protein zero-like 1##AK315546|MPZL1|9019|myelin protein zero-like 1##AF239756|MPZL1|9019|myelin protein zero-like 1##BT019542|MPZL1|9019|myelin protein zero-like 1##CR542160|MPZL1|9019|myelin protein zero-like 1##HQ447352|MPZL1|9019|myelin protein zero-like 1##BC117366|ADCY10|55811|adenylate cyclase 10 (soluble)##BC117372|ADCY10|55811|adenylate cyclase 10 (soluble)##AF176813|ADCY10|55811|adenylate cyclase 10 (soluble)##AF299350|ADCY10|55811|adenylate cyclase 10 (soluble)##AF331033|ADCY10|55811|adenylate cyclase 10 (soluble)##AK310395|ADCY10|55811|adenylate cyclase 10 (soluble)##AK310531|ADCY10|55811|adenylate cyclase 10 (soluble)##AK302884|ADCY10|55811|adenylate cyclase 10 (soluble)##NM_001167749|ADCY10|55811|adenylate cyclase 10 (soluble)##NM_018417|ADCY10|55811|adenylate cyclase 10 (soluble)##AM393085|BRP44|25874|brain protein 44##CR407632|BRP44|25874|brain protein 44##CR533473|BRP44|25874|brain protein 44##BC104157|BRP44|25874|brain protein 44##BC104158|BRP44|25874|brain protein 44	0.040342	
chr11	68637159	68637271	reg1031916.p2	4.031	+	TSC_hg19_v1_chr11_-_68609385 AK172798 NM_001031847 NM_001876	-27835	-	TSC_hg19_v1_chr11_-_68609329 AK314301	-27879	-	BC000185 L39211 TSC_hg19_v1_chr11_-_68609308	-27925	-	TSC_hg19_v1_chr11_-_68671301 BC055088 CU691112 AK301989 AK096756 NM_181514 NM_181515	34070	-	TSC_hg19_v1_chr11_+_68671318 NM_002180	34094	+	TSC_hg19_v1_chr11_+_68671350 BC041808	34120	+	AK172798|CPT1A|1374|carnitine palmitoyltransferase 1A (liver)##NM_001031847|CPT1A|1374|carnitine palmitoyltransferase 1A (liver)##NM_001876|CPT1A|1374|carnitine palmitoyltransferase 1A (liver)##AK314301|CPT1A|1374|carnitine palmitoyltransferase 1A (liver)##BC000185|CPT1A|1374|carnitine palmitoyltransferase 1A (liver)##L39211|CPT1A|1374|carnitine palmitoyltransferase 1A (liver)##BC055088|MRPL21|219927|mitochondrial ribosomal protein L21##AK301989|MRPL21|219927|mitochondrial ribosomal protein L21##AK096756|MRPL21|219927|mitochondrial ribosomal protein L21##NM_181514|MRPL21|219927|mitochondrial ribosomal protein L21##NM_181515|MRPL21|219927|mitochondrial ribosomal protein L21##NM_002180|IGHMBP2|3508|immunoglobulin mu binding protein 2##BC041808|IGHMBP2|3508|immunoglobulin mu binding protein 2	0.161362	
chr16	83987822	83987939	reg1037744.p4	4.031	+	NM_182981 TSC_hg19_v1_chr16_+_83986844 AK290383 AY258068 AY037158 BC020434 BC032476 BC093687 BC113417	-996	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	-55111	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	-146224	+	TSC_hg19_v1_chr16_+_84002230 AY299331 NM_019065 BC131615 AK127376	14332	+	NM_001080442	87881	-	TSC_hg19_v1_chr16_-_84150441 AK291773 BC114555 BC114961 AK299067	162532	-	NM_182981|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK290383|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY258068|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY037158|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC020434|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC032476|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC093687|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC113417|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##AY299331|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_019065|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##BC131615|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##AK127376|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_001080442|SLC38A8|146167|solute carrier family 38, member 8##AK291773|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114555|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114961|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##AK299067|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1	0.0	
chr16	87964265	87964398	reg1032775.p1	4.031	+	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	-61256	-	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	-164761	-	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	-164816	-	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	5816	-	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	20837	+	AK315535 NM_001173542	29145	+	DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##BC001044|KLHDC4|54758|kelch domain containing 4##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein	0.198894	
chr16	88572046	88572124	reg1028771.p2	4.031	+	TSC_hg19_v1_chr16_+_88519921 NM_153813	-52120	+	TSC_hg19_v1_chr16_+_88519687 AF488691	-52380	+	NM_001127464	-78207	+	TSC_hg19_v1_chr16_+_88636807 NM_144604	64647	+	AK300254 AK302716 TSC_hg19_v1_chr16_+_88636810	64725	+	AK056632 AK225807 TSC_hg19_v1_chr16_+_88636823	64743	+	NM_153813|ZFPM1|161882|zinc finger protein, multitype 1##AF488691|ZFPM1|161882|zinc finger protein, multitype 1##NM_001127464|ZNF469|84627|zinc finger protein 469##NM_144604|ZC3H18|124245|zinc finger CCCH-type containing 18##AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18##AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18##AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18	0.493999	CTCF.p2:0:0.494
chr17	60770660	60770757	reg1028623.p1	4.031	+	TSC_hg19_v1_chr17_+_60705060 BC150212 AF107292 AB384513	-65601	+	BC146647 TSC_hg19_v1_chr17_+_60705048 AF134838	-65663	+	TSC_hg19_v1_chr17_+_60704751 AB014609 BC153884 NM_006039	-65951	+	NM_001100875 BC035021	113303	-	AK122947 AK093076 AX747906 BX648705 NM_152598	114969	-	NM_025185	316189	+	BC150212|MRC2|9902|mannose receptor, C type 2##AF107292|MRC2|9902|mannose receptor, C type 2##BC146647|MRC2|9902|mannose receptor, C type 2##AF134838|MRC2|9902|mannose receptor, C type 2##AB014609|MRC2|9902|mannose receptor, C type 2##BC153884|MRC2|9902|mannose receptor, C type 2##NM_006039|MRC2|9902|mannose receptor, C type 2##NM_001100875|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC035021|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	0.265082	CTCF.p2:1:0.265
chr19	39195419	39195519	reg1034580.p1	4.031	+	AK023756 TSC_hg19_v1_chr19_+_39155341	-40194	+	TSC_hg19_v1_chr19_+_39138349 BC005033 GU987085 AB590161 CU678876 DQ431186 DQ893439 DQ896777 D89980	-57098	+	TSC_hg19_v1_chr19_+_39138326 AK299955 AK304554 AK309361 AK309364 BX647098	-57148	+	TSC_hg19_v1_chr19_-_39227632 AK125713	32153	-	AK127398 NM_144691	39644	-	U06643 BC061588 BC073743 L07769 NM_002307	68681	-	BC005033|ACTN4|81|actinin, alpha 4##GU987085|ACTN4|81|actinin, alpha 4##DQ431186|ACTN4|81|actinin, alpha 4##DQ893439|ACTN4|81|actinin, alpha 4##DQ896777|ACTN4|81|actinin, alpha 4##D89980|ACTN4|81|actinin, alpha 4##AK299955|ACTN4|81|actinin, alpha 4##AK304554|ACTN4|81|actinin, alpha 4##AK309361|ACTN4|81|actinin, alpha 4##AK309364|ACTN4|81|actinin, alpha 4##BX647098|ACTN4|81|actinin, alpha 4##AK125713|CAPN12|147968|calpain 12##AK127398|CAPN12|147968|calpain 12##NM_144691|CAPN12|147968|calpain 12##U06643|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC061588|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC073743|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##L07769|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##NM_002307|LGALS7|3963|lectin, galactoside-binding, soluble, 7	0.010297	
chr2	234159837	234160017	reg1006240.p1	4.031	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-234811	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-234868	+	BC069151 BC107053 NM_005383	-262546	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	339	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	396	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	430	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.0	
chr4	39927365	39927443	reg1041552.p2	4.031	+	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	-227600	+	TSC_hg19_v1_chr4_-_39640486 AK023351 BC008502 NM_174921 AK307146	-286848	-	TSC_hg19_v1_chr4_+_39529635 AK056558	-397778	+	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	51934	-	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	52189	-	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	131128	+	NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK023351|C4orf34|201895|chromosome 4 open reading frame 34##BC008502|C4orf34|201895|chromosome 4 open reading frame 34##NM_174921|C4orf34|201895|chromosome 4 open reading frame 34##AK307146|C4orf34|201895|chromosome 4 open reading frame 34##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2	0.0	
chr5	86696409	86696475	reg1012362.p2	4.031	+	AK021812 TSC_hg19_v1_chr5_+_86676755	-19755	+	TSC_hg19_v1_chr5_+_86564758 NM_022650 AK300269 BC070063 BC020761 BC107870 AK312739 AK300263 AK300406 M23612 BC054891	-131689	+	TSC_hg19_v1_chr5_+_86564238 CU689592	-132189	+	TSC_hg19_v1_chr5_-_86703928 AK094534	7519	-	CU675079 CU677687 CU692576 AB590163 CR407658 DQ892550 DQ895761 U12685 TSC_hg19_v1_chr5_-_86708717 U11791 BC022351 BC016823 BC016705 AK291720 BC005280 BX537673 NM_001199189	12223	-	TSC_hg19_v1_chr5_-_86708756 NM_001239	12360	-	NM_022650|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AK300269|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC070063|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC020761|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC107870|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AK312739|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AK300263|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AK300406|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##M23612|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC054891|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AK094534|CCNH|902|cyclin H##CR407658|CCNH|902|cyclin H##DQ892550|CCNH|902|cyclin H##DQ895761|CCNH|902|cyclin H##U12685|CCNH|902|cyclin H##U11791|CCNH|902|cyclin H##BC022351|CCNH|902|cyclin H##BC016823|CCNH|902|cyclin H##BC016705|CCNH|902|cyclin H##AK291720|CCNH|902|cyclin H##BC005280|CCNH|902|cyclin H##BX537673|CCNH|902|cyclin H##NM_001199189|CCNH|902|cyclin H##NM_001239|CCNH|902|cyclin H	0.907856	
chr6	11467659	11467808	reg1031286.p1	4.031	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-85193	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-234823	-	L43821 TSC_hg19_v1_chr6_-_11232900	-234833	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	70765	+	NM_001143948 NM_032744	311546	-	NM_002114	544990	+	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1	0.0	
chr6	167493554	167493735	reg1010031.p2	4.031	+	TSC_hg19_v1_chr6_+_167412884 NM_007045 NM_194429 Y18046 AK294950 AK289846 BX647686 AK312791 BC011902 AB590215 CU680104 DQ893037 DQ896278 AJ420472	-80791	+	AK315467 TSC_hg19_v1_chr6_-_167370038 BC036282 NM_003730	-123587	-	TSC_hg19_v1_chr6_-_167370030 BC001660 BC001819 BC039713 BC051912 AJ419865 AJ419866 AJ419867 U85625	-123634	-	NM_004367	31650	+	NM_031409 U68031 U68030	42605	+	BC095537 NM_005299	77672	-	NM_007045|FGFR1OP|11116|FGFR1 oncogene partner##NM_194429|FGFR1OP|11116|FGFR1 oncogene partner##Y18046|FGFR1OP|11116|FGFR1 oncogene partner##AK294950|FGFR1OP|11116|FGFR1 oncogene partner##AK289846|FGFR1OP|11116|FGFR1 oncogene partner##AK312791|FGFR1OP|11116|FGFR1 oncogene partner##BC011902|FGFR1OP|11116|FGFR1 oncogene partner##DQ893037|FGFR1OP|11116|FGFR1 oncogene partner##DQ896278|FGFR1OP|11116|FGFR1 oncogene partner##AJ420472|FGFR1OP|11116|FGFR1 oncogene partner##AK315467|RNASET2|8635|ribonuclease T2##BC036282|RNASET2|8635|ribonuclease T2##NM_003730|RNASET2|8635|ribonuclease T2##BC001660|RNASET2|8635|ribonuclease T2##BC001819|RNASET2|8635|ribonuclease T2##BC039713|RNASET2|8635|ribonuclease T2##BC051912|RNASET2|8635|ribonuclease T2##AJ419865|RNASET2|8635|ribonuclease T2##AJ419866|RNASET2|8635|ribonuclease T2##AJ419867|RNASET2|8635|ribonuclease T2##U85625|RNASET2|8635|ribonuclease T2##NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31	0.0	
chrX	70835146	70835324	reg1034230.p2	4.031	+	NM_052957	-37362	+	TSC_hg19_v1_chrX_+_70765496 AL050366	-69713	+	TSC_hg19_v1_chrX_+_70752953 AK026724 AK300267 BX537844 BC038180 BC014434	-82272	+	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	3097	-	NM_001145139 NM_001145140	102899	-	NM_001145139 NM_001145140	147904	+	NM_052957|ACRC|93953|acidic repeat containing##AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##AK300267|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BX537844|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BC038180|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BC014434|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49	0.795056	CTCF.p2:-106:0.778
chr12	67851762	67851854	reg1031760.p1	4.030	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-188378	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-188636	+	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	-188706	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	190815	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	701614	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	767744	-	BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26	0.038439	
chr15	85333120	85333193	reg1037128.p2	4.030	+	TSC_hg19_v1_chr15_+_85291875 BC094688	-41294	+	TSC_hg19_v1_chr15_+_85291820 NM_014630	-41331	+	TSC_hg19_v1_chr15_+_85291590 D86966	-41574	+	AY044449 NM_020778	26754	+	AK291997 AK296075 AK298369 AK296074 AK296119 AK309571 AK311387 AK309578 AF309632 NM_004213 NM_201651 BC029788	94755	+	TSC_hg19_v1_chr15_+_85523735 BC060762 AK074280 NM_001243137	190546	+	BC094688|ZNF592|9640|zinc finger protein 592##NM_014630|ZNF592|9640|zinc finger protein 592##D86966|ZNF592|9640|zinc finger protein 592##AY044449|ALPK3|57538|alpha-kinase 3##NM_020778|ALPK3|57538|alpha-kinase 3##AK291997|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296075|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK298369|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296074|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK296119|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AK309578|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##AF309632|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_004213|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##NM_201651|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC029788|SLC28A1|9154|solute carrier family 28 (sodium-coupled nucleoside transporter), member 1##BC060762|PDE8A|5151|phosphodiesterase 8A##AK074280|PDE8A|5151|phosphodiesterase 8A##NM_001243137|PDE8A|5151|phosphodiesterase 8A	0.0	
chr18	11733267	11733352	reg1005034.p2	4.030	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	-44097	+	NM_022068	-584549	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-1207212	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	18206	+	L10665 TSC_hg19_v1_chr18_+_11752245	18906	+	NM_020412 TSC_hg19_v1_chr18_+_11851412 AK314068 BC065933 BC012733 AF281064 CU680382	118140	+	NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_020412|CHMP1B|57132|charged multivesicular body protein 1B##AK314068|CHMP1B|57132|charged multivesicular body protein 1B##BC065933|CHMP1B|57132|charged multivesicular body protein 1B##BC012733|CHMP1B|57132|charged multivesicular body protein 1B##AF281064|CHMP1B|57132|charged multivesicular body protein 1B	0.0	
chr2	99224883	99225031	reg1029959.p1	4.030	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	-15	-	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-163599	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-262052	+	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	93	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	113	+	TSC_hg19_v1_chr2_+_99225088 AF077038	135	+	HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)##AF077038|UNC50|25972|unc-50 homolog (C. elegans)	0.0	
chr3	11685327	11685426	reg1034503.p2	4.030	+	AK307708 TSC_hg19_v1_chr3_-_11623831 NM_001128220	-61543	-	TSC_hg19_v1_chr3_-_11610264 AK308761 NM_001128221	-75046	-	AK314504 TSC_hg19_v1_chr3_+_11314092 BC000091 AF094516	-371280	+	TSC_hg19_v1_chr3_-_11685397 NM_001128219	20	-	TSC_hg19_v1_chr3_-_11762012 D50911 BC001514 AK130542 BC000763 BC003038 NM_014667	76739	-	EU832515 EU832596 AK295839 TSC_hg19_v1_chr3_-_11888358 AK310993 BC015088 NM_138807 AK092776 AX747723 AK309733 AK303598	202883	-	AK307708|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)##AK308761|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128221|VGLL4|9686|vestigial like 4 (Drosophila)##AK314504|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##BC000091|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AF094516|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)##D50911|VGLL4|9686|vestigial like 4 (Drosophila)##BC001514|VGLL4|9686|vestigial like 4 (Drosophila)##AK130542|VGLL4|9686|vestigial like 4 (Drosophila)##BC000763|VGLL4|9686|vestigial like 4 (Drosophila)##BC003038|VGLL4|9686|vestigial like 4 (Drosophila)##NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)##EU832515|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##EU832596|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK295839|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK310993|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##BC015088|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_138807|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK092776|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK309733|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK303598|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)	0.0	
chr3	131245734	131245830	reg1034297.p1	4.030	+	TSC_hg19_v1_chr3_-_131221816 CR456720 CU678442 BC002345 X06323 BC003375 AK301377 AK296626 NM_007208	-24028	-	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	-145131	+	TSC_hg19_v1_chr3_+_131080737 AK000532 BC015593	-165039	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	508058	-	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	790456	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	790506	+	CR456720|MRPL3|11222|mitochondrial ribosomal protein L3##X06323|MRPL3|11222|mitochondrial ribosomal protein L3##BC003375|MRPL3|11222|mitochondrial ribosomal protein L3##AK301377|MRPL3|11222|mitochondrial ribosomal protein L3##AK296626|MRPL3|11222|mitochondrial ribosomal protein L3##NM_007208|MRPL3|11222|mitochondrial ribosomal protein L3##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK000532|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##BC015593|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate	0.084079	
chr3	167124825	167124929	reg1033768.p1	4.030	+	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	-26800	-	NM_000055 TSC_hg19_v1_chr3_-_165555283	-1569610	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	-1569684	-	AK226025 AB006423 NM_006217 AK293391	66943	-	BC035512 NM_178824	246411	-	TSC_hg19_v1_chr3_-_167371732 AK097556	246846	-	AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing##NM_000055|BCHE|590|butyrylcholinesterase##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##BC035512|WDR49|151790|WD repeat domain 49##NM_178824|WDR49|151790|WD repeat domain 49##AK097556|WDR49|151790|WD repeat domain 49	0.0	
chr4	694929	695029	reg1035888.p1	4.030	+	TSC_hg19_v1_chr4_-_683107 AK292010	-11863	-	TSC_hg19_v1_chr4_-_682967 BC030246 NM_032219 AK025922	-11954	-	CU688866 AY358401 TSC_hg19_v1_chr4_-_682941	-12050	-	TSC_hg19_v1_chr4_+_699570 AK225892 NM_006315 AK057124 AK300290 AK125801	4651	+	TSC_hg19_v1_chr4_-_775606 BC040652 AK055583	80643	-	AK126578 TSC_hg19_v1_chr4_-_819894 AK311921 AB593095 BC002471 NM_006651	124946	-	AK292010|MFSD7|84179|major facilitator superfamily domain containing 7##BC030246|MFSD7|84179|major facilitator superfamily domain containing 7##NM_032219|MFSD7|84179|major facilitator superfamily domain containing 7##AK025922|MFSD7|84179|major facilitator superfamily domain containing 7##AY358401|MFSD7|84179|major facilitator superfamily domain containing 7##AK225892|PCGF3|10336|polycomb group ring finger 3##NM_006315|PCGF3|10336|polycomb group ring finger 3##AK057124|PCGF3|10336|polycomb group ring finger 3##AK300290|PCGF3|10336|polycomb group ring finger 3##AK125801|PCGF3|10336|polycomb group ring finger 3##BC040652|LOC100129917|100129917|uncharacterized LOC100129917##AK055583|LOC100129917|100129917|uncharacterized LOC100129917##AK126578|CPLX1|10815|complexin 1##AK311921|CPLX1|10815|complexin 1##AB593095|CPLX1|10815|complexin 1##BC002471|CPLX1|10815|complexin 1##NM_006651|CPLX1|10815|complexin 1	0.883652	CTCF.p2:-10:0.884
chr1	155936095	155936176	reg1034867.p2	4.029	+	NM_181885 BC101507 BC101509 AY170824 AY288415 AY394502 EU432129	-24646	+	TSC_hg19_v1_chr1_-_155904201 AK225714	-31933	-	BC027182 TSC_hg19_v1_chr1_-_155904193 AB020714	-31945	-	TSC_hg19_v1_chr1_-_155939059 AM393305 BT007407 CU676564 DQ891489 DQ894678	2926	-	TSC_hg19_v1_chr1_-_155947967 AL512715 NM_004723	11810	-	TSC_hg19_v1_chr1_-_155948245 AF486838	12091	-	NM_181885|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##BC101507|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##BC101509|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY170824|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY288415|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY394502|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##EU432129|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AK225714|KIAA0907|22889|KIAA0907##BC027182|KIAA0907|22889|KIAA0907##AB020714|KIAA0907|22889|KIAA0907##AM393305|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##BT007407|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##DQ891489|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##DQ894678|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AL512715|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##NM_004723|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AF486838|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2	0.0	
chr12	108015884	108015984	reg1033077.p2	4.029	+	AK127295 NM_001017523	-41301	+	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	-303721	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-528324	-	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	63733	+	AK056378 TSC_hg19_v1_chr12_-_108154899	138905	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	138976	-	AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK056378|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4	0.252817	CTCF.p2:17:0.253
chr12	109006047	109006207	reg1031031.p2	4.029	+	AY358389 NM_181724 TSC_hg19_v1_chr12_-_108991924	-14219	-	TSC_hg19_v1_chr12_-_108991861 AK097290	-14275	-	AK295288 TSC_hg19_v1_chr12_-_108991834	-14294	-	AK298742 NM_001206609	19712	-	AK225644 U02297 AK295238 TSC_hg19_v1_chr12_-_109027584	21447	-	TSC_hg19_v1_chr12_-_109027639 AK300057 AK290395 BC029782	21506	-	AY358389|TMEM119|338773|transmembrane protein 119##NM_181724|TMEM119|338773|transmembrane protein 119##AK097290|TMEM119|338773|transmembrane protein 119##AK295288|TMEM119|338773|transmembrane protein 119##AK298742|SELPLG|6404|selectin P ligand##NM_001206609|SELPLG|6404|selectin P ligand##AK225644|SELPLG|6404|selectin P ligand##U02297|SELPLG|6404|selectin P ligand##AK295238|SELPLG|6404|selectin P ligand##AK290395|SELPLG|6404|selectin P ligand##BC029782|SELPLG|6404|selectin P ligand	0.970551	CTCF.p2:-30:0.971
chr14	92980061	92980131	reg1032729.p2	4.029	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-137	+	NM_153646 AF520704 AF520705 BC069653	-189920	+	AK295059 NM_153647	-190560	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	138540	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	138727	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	234863	-	AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain	0.0	
chr19	13094674	13094854	reg1003403.p2	4.029	+	AK095926 NM_152654 BC101800 BC113476 AB070695 HQ258091	-14312	+	TSC_hg19_v1_chr19_-_13068038 AF479749 NM_052850	-26719	-	AJ295986 BC004944 BC013027 BC013039 AF412816 AF475095 AJ429498 CU686712 BC069200 TSC_hg19_v1_chr19_-_13068030	-26745	-	TSC_hg19_v1_chr19_+_13106288 BC052801 NM_002501 AB385580 BT019732	11638	+	TSC_hg19_v1_chr19_+_13134807 AK297261 U18759	40040	+	TSC_hg19_v1_chr19_+_13135426 BX537794 AK295290	40633	+	AK095926|DAND5|199699|DAN domain family, member 5##NM_152654|DAND5|199699|DAN domain family, member 5##BC101800|DAND5|199699|DAN domain family, member 5##BC113476|DAND5|199699|DAN domain family, member 5##AB070695|DAND5|199699|DAN domain family, member 5##HQ258091|DAND5|199699|DAN domain family, member 5##AF479749|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##NM_052850|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AJ295986|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC004944|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC013027|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC013039|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AF412816|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AF475095|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AJ429498|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##BC069200|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##NM_002501|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BT019732|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK297261|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U18759|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	0.0	
chr19	47660300	47660480	reg1032587.p2	4.029	+	TSC_hg19_v1_chr19_+_47634184 AB385085 DQ891751 DQ894932 CU676224 AF110956 BT007290	-26168	+	TSC_hg19_v1_chr19_+_47634171 BC003611	-26229	+	TSC_hg19_v1_chr19_+_47634145 AK315624 AF090385 AF046025 AK090645	-26251	+	U82987 BC136481 TSC_hg19_v1_chr19_-_47734457 AF332558 NM_014417	73955	-	AB590880 AK298837 AF354654 AF354655 AF354656 NM_001127240 NM_001127241 NM_001127242	75550	-	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	99371	+	DQ891751|SAE1|10055|SUMO1 activating enzyme subunit 1##DQ894932|SAE1|10055|SUMO1 activating enzyme subunit 1##AF110956|SAE1|10055|SUMO1 activating enzyme subunit 1##BT007290|SAE1|10055|SUMO1 activating enzyme subunit 1##BC003611|SAE1|10055|SUMO1 activating enzyme subunit 1##AK315624|SAE1|10055|SUMO1 activating enzyme subunit 1##AF090385|SAE1|10055|SUMO1 activating enzyme subunit 1##AF046025|SAE1|10055|SUMO1 activating enzyme subunit 1##AK090645|SAE1|10055|SUMO1 activating enzyme subunit 1##U82987|BBC3|27113|BCL2 binding component 3##BC136481|BBC3|27113|BCL2 binding component 3##AF332558|BBC3|27113|BCL2 binding component 3##NM_014417|BBC3|27113|BCL2 binding component 3##AK298837|BBC3|27113|BCL2 binding component 3##AF354654|BBC3|27113|BCL2 binding component 3##AF354655|BBC3|27113|BCL2 binding component 3##AF354656|BBC3|27113|BCL2 binding component 3##NM_001127240|BBC3|27113|BCL2 binding component 3##NM_001127241|BBC3|27113|BCL2 binding component 3##NM_001127242|BBC3|27113|BCL2 binding component 3##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9	0.0	
chr20	62643944	62644124	reg1022807.p5	4.029	+	TSC_hg19_v1_chr20_+_62612576 AB527848	-31448	+	AF221842 TSC_hg19_v1_chr20_+_62612506 AF026031 AK314310 AB019219 BC001666	-31503	+	TSC_hg19_v1_chr20_+_62612487 AK225993 AK001554	-31557	+	AJ243896 AF270652 BC111390 NM_018419 BC035513 BC038590 BC073971 TSC_hg19_v1_chr20_-_62680993 AB033888	36904	-	NM_198723	44404	+	NM_003195	49975	+	AF221842|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF026031|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK314310|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AB019219|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##BC001666|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK225993|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK001554|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AJ243896|SOX18|54345|SRY (sex determining region Y)-box 18##AF270652|SOX18|54345|SRY (sex determining region Y)-box 18##BC111390|SOX18|54345|SRY (sex determining region Y)-box 18##NM_018419|SOX18|54345|SRY (sex determining region Y)-box 18##BC035513|SOX18|54345|SRY (sex determining region Y)-box 18##BC038590|SOX18|54345|SRY (sex determining region Y)-box 18##BC073971|SOX18|54345|SRY (sex determining region Y)-box 18##AB033888|SOX18|54345|SRY (sex determining region Y)-box 18##NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2	0.0	
chr6	108121914	108122043	reg1037388.p1	4.029	+	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	-310550	+	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	-341248	-	BC131628 NM_001080450	-686343	-	AK303562 AK074125 TSC_hg19_v1_chr6_-_108145518 AK093571 AX748208 NM_198081	23538	-	AF100141 CU690382 CU690568 BC001153 TSC_hg19_v1_chr6_-_108279282 AK074835	157279	-	TSC_hg19_v1_chr6_-_108279316 AJ011779	157334	-	NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AK303562|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK074125|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK093571|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_198081|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)##AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)	0.052113	
chr6	118151065	118151164	reg1008528.p1	4.029	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-154448	+	BC110325 TSC_hg19_v1_chr6_+_117996661 BC063794	-154453	+	TSC_hg19_v1_chr6_+_117996651 BC150654 BC150655 AK125119	-154467	+	BC028615 NM_001029858 BC114925	77576	+	NM_002667 M63603 AK311799 BC005269	718351	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	821922	-	AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC110325|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC063794|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150654|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC150655|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##AK125119|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like	0.0	
chr6	159331508	159331634	reg1030410.p1	4.029	+	NM_001195032	-21953	+	TSC_hg19_v1_chr6_-_159240446 NM_001111077	-91115	-	TSC_hg19_v1_chr6_-_159240401 AK296738	-91158	-	TSC_hg19_v1_chr6_-_159420766 BC035675	89198	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	89248	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	89650	-	NM_001195032|C6orf99|100130967|chromosome 6 open reading frame 99##NM_001111077|EZR|7430|ezrin##AK296738|EZR|7430|ezrin##BC035675|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)	0.0	
chr7	141853330	141853511	reg1033445.p1	4.029	+	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-41881	+	AF016833 NM_004668 BC120872	-157728	+	BC104933 BC104937 NM_176817	-179848	-	AY358487 BC035384 AK122940 NM_001001317	104441	-	NM_001190487	520710	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	603906	+	AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC104933|TAS2R38|5726|taste receptor, type 2, member 38##BC104937|TAS2R38|5726|taste receptor, type 2, member 38##NM_176817|TAS2R38|5726|taste receptor, type 2, member 38##AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	0.912166	CTCF.p2:-40:0.912
chr9	136824036	136824185	reg1034795.p1	4.029	+	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-219124	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-220632	-	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-322602	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	33336	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	109083	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	109516	-	BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3	0.0	
chr9	92445146	92445226	reg1031489.p1	4.029	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-225205	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-332179	-	BC054500 NM_001142287 NM_006378	-350576	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	959933	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1118850	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	1118881	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.0	
chr10	3852328	3852396	reg1032873.p1	4.028	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-24853	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-25051	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-637357	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1016056	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1153152	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1153261	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr17	30438469	30438584	reg1029537.p1	4.028	+	AY386261 AK302740 BC117373 BC143578 BC143581 AK310287 NM_052888 HQ258530 AJ314647	-90433	+	AB385289 TSC_hg19_v1_chr17_+_30264319	-174232	+	TSC_hg19_v1_chr17_+_30264164 BC015704	-174363	+	TSC_hg19_v1_chr17_+_30469463 BC060781 NM_001033566 NM_001033568 NM_018307 AJ496730	30902	+	TSC_hg19_v1_chr17_+_30469520 BC041114	30996	+	TSC_hg19_v1_chr17_+_30469544 BC110895	31019	+	AY386261|LRRC37B|114659|leucine rich repeat containing 37B##AK302740|LRRC37B|114659|leucine rich repeat containing 37B##BC117373|LRRC37B|114659|leucine rich repeat containing 37B##BC143578|LRRC37B|114659|leucine rich repeat containing 37B##BC143581|LRRC37B|114659|leucine rich repeat containing 37B##AK310287|LRRC37B|114659|leucine rich repeat containing 37B##NM_052888|LRRC37B|114659|leucine rich repeat containing 37B##HQ258530|LRRC37B|114659|leucine rich repeat containing 37B##AJ314647|LRRC37B|114659|leucine rich repeat containing 37B##BC015704|SUZ12|23512|suppressor of zeste 12 homolog (Drosophila)##BC060781|RHOT1|55288|ras homolog gene family, member T1##NM_001033566|RHOT1|55288|ras homolog gene family, member T1##NM_001033568|RHOT1|55288|ras homolog gene family, member T1##NM_018307|RHOT1|55288|ras homolog gene family, member T1##AJ496730|RHOT1|55288|ras homolog gene family, member T1##BC041114|RHOT1|55288|ras homolog gene family, member T1##BC110895|RHOT1|55288|ras homolog gene family, member T1	0.572698	CTCF.p2:40:0.573
chr17	77061327	77061446	reg1036450.p1	4.028	+	AF329840 NM_198593 BC021553	-30864	+	TSC_hg19_v1_chr17_+_77020308 AK055541	-41076	+	TSC_hg19_v1_chr17_+_77020250 NM_030968 NM_198594	-41144	+	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	9644	+	NM_001082575	417176	-	AY230663 BC041453 NM_178543 AY358622	643503	+	AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_030968|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198594|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7	0.997559	CTCF.p2:-17:0.998
chr2	20674835	20674928	reg1035588.p1	4.028	+	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-28049	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-124462	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-147748	-	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	175967	-	AF522369 NM_182828	191542	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	347972	-	AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43	0.0	
chr3	72570282	72570395	reg1034325.p2	4.028	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-736067	-	AK313656 NM_173359	-766415	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-766816	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	327210	-	BC017274 TSC_hg19_v1_chr3_-_72897575	327237	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	327254	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr6	43139093	43139192	reg1030036.p2	4.028	+	NM_003131 TSC_hg19_v1_chr6_+_43139027 BC052572 J03161	-89	+	TSC_hg19_v1_chr6_+_43044048 NM_002821 NM_152880 NM_152881 NM_152882 U33635 BC071557 BC002377 BC014626 AK292589 AF531868 AF531869 AF531870 AF531871 AF531872 U40271 AB209350 AK291016	-95065	+	NM_201522 AK127894	-110904	+	TSC_hg19_v1_chr6_+_43139192 BC048211	51	+	TSC_hg19_v1_chr6_+_43139204 AB209128 AB464198	151	+	TSC_hg19_v1_chr6_+_43149918 AK125228 CR749511 NM_015089 CR749841	10772	+	NM_003131|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC052572|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##J03161|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##NM_002821|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152880|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152881|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152882|PTK7|5754|PTK7 protein tyrosine kinase 7##U33635|PTK7|5754|PTK7 protein tyrosine kinase 7##BC071557|PTK7|5754|PTK7 protein tyrosine kinase 7##BC002377|PTK7|5754|PTK7 protein tyrosine kinase 7##BC014626|PTK7|5754|PTK7 protein tyrosine kinase 7##AK292589|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531868|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531869|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531870|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531871|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531872|PTK7|5754|PTK7 protein tyrosine kinase 7##U40271|PTK7|5754|PTK7 protein tyrosine kinase 7##AB209350|PTK7|5754|PTK7 protein tyrosine kinase 7##AK291016|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_201522|KLC4|89953|kinesin light chain 4##AK127894|KLC4|89953|kinesin light chain 4##BC048211|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##AB209128|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##AK125228|CUL9|23113|cullin 9##CR749511|CUL9|23113|cullin 9##NM_015089|CUL9|23113|cullin 9##CR749841|CUL9|23113|cullin 9	0.03697	
chr9	5529756	5529937	reg1027898.p1	4.028	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	-19183	+	TSC_hg19_v1_chr9_+_5450455 NM_014143 DQ836393 AK300470 AK314567 AF233516 BC069381	-79339	+	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	-91966	-	TSC_hg19_v1_chr9_+_5629121 NM_001135920 NM_001206557 NM_020829	99281	+	BC036853 TSC_hg19_v1_chr9_-_5630098	100244	-	AL834191 AB058718 TSC_hg19_v1_chr9_-_5833045 BC136771 BC136773 BC144404	303105	-	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_014143|CD274|29126|CD274 molecule##DQ836393|CD274|29126|CD274 molecule##AK300470|CD274|29126|CD274 molecule##AK314567|CD274|29126|CD274 molecule##AF233516|CD274|29126|CD274 molecule##BC069381|CD274|29126|CD274 molecule##BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46##NM_001135920|KIAA1432|57589|KIAA1432##NM_001206557|KIAA1432|57589|KIAA1432##NM_020829|KIAA1432|57589|KIAA1432##BC036853|C9orf46|55848|chromosome 9 open reading frame 46##AL834191|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AB058718|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136771|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136773|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC144404|ERMP1|79956|endoplasmic reticulum metallopeptidase 1	0.0	
chr10	1463304	1463485	reg1004532.p2	4.027	+	TSC_hg19_v1_chr10_+_1102822 AK292591	-360568	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-360625	+	BC057827 TSC_hg19_v1_chr10_-_1102645	-360742	-	AF034837 NM_018702	316275	-	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	1646353	+	AK092597 AX747622 NM_001242339	1647424	+	AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC057827|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet	0.0	
chr10	82295542	82295722	reg1016184.p1	4.027	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-81528	+	TSC_hg19_v1_chr10_+_82214071 AF311903	-81561	+	AK074558 AK295321 AL136638 TSC_hg19_v1_chr10_+_82214066	-81564	+	AK123885 NM_207372	2025	+	AK123978 NM_001145719	4942	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	1339450	+	BC002920|TSPAN14|81619|tetraspanin 14##AF311903|TSPAN14|81619|tetraspanin 14##AK074558|TSPAN14|81619|tetraspanin 14##AK295321|TSPAN14|81619|tetraspanin 14##AL136638|TSPAN14|81619|tetraspanin 14##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3	0.0	
chr11	88034859	88035039	reg1029707.p1	4.027	+	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	-126357	-	AK024853 TSC_hg19_v1_chr11_+_87032449	-1002507	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	-1285971	+	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	35918	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	35953	-	TSC_hg19_v1_chr11_-_88070905 BX537913 NM_001114173 NM_001814 NM_148170	35982	-	BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family##AK024853|TMEM135|65084|transmembrane protein 135##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C##BX537913|CTSC|1075|cathepsin C##NM_001114173|CTSC|1075|cathepsin C##NM_001814|CTSC|1075|cathepsin C##NM_148170|CTSC|1075|cathepsin C	0.0	
chr12	53973448	53973601	reg1023687.p1	4.027	+	BC104234 BC104235 AF005271 NM_003717	-72128	-	NM_134324	-78148	+	TSC_hg19_v1_chr12_+_53895135 AK309569 U08998 AK290737 AK293728 AB464283 BT007140 DQ893549 DQ893931	-78396	+	AB463398 X57197 NM_001130059	21269	-	TSC_hg19_v1_chr12_-_54019764 BC042363 NM_001206683	46211	-	TSC_hg19_v1_chr12_-_54020167 BC136302 X52943 AK298853 AK313507 BC032433 BC140006 NM_001130060 NM_001206682 NM_006856	46629	-	BC104234|NPFF|8620|neuropeptide FF-amide peptide precursor##BC104235|NPFF|8620|neuropeptide FF-amide peptide precursor##AF005271|NPFF|8620|neuropeptide FF-amide peptide precursor##NM_003717|NPFF|8620|neuropeptide FF-amide peptide precursor##NM_134324|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##AK309569|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##U08998|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##AK290737|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##BT007140|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##DQ893549|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##DQ893931|TARBP2|6895|TAR (HIV-1) RNA binding protein 2##X57197|ATF7|11016|activating transcription factor 7##NM_001130059|ATF7|11016|activating transcription factor 7##BC042363|ATF7|11016|activating transcription factor 7##NM_001206683|ATF7|11016|activating transcription factor 7##BC136302|ATF7|11016|activating transcription factor 7##X52943|ATF7|11016|activating transcription factor 7##AK298853|ATF7|11016|activating transcription factor 7##AK313507|ATF7|11016|activating transcription factor 7##BC032433|ATF7|11016|activating transcription factor 7##BC140006|ATF7|11016|activating transcription factor 7##NM_001130060|ATF7|11016|activating transcription factor 7##NM_001206682|ATF7|11016|activating transcription factor 7##NM_006856|ATF7|11016|activating transcription factor 7	0.074729	
chr16	22526817	22526965	reg1037860.p1	4.027	+	NM_001135865 BC036263 AK296338 CU690320	-1909	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	-141096	-	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	-218143	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	298611	+	AB209794 AF105374 AF105375 NM_006043 BC093734 BC093736	298960	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	633658	-	NM_001135865|LOC100132247|100132247|nuclear pore complex interacting protein related gene##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296338|LOC100132247|100132247|nuclear pore complex interacting protein related gene##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AB209794|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105374|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105375|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_006043|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093734|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093736|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31	0.0	
chr17	2163610	2163699	reg1033758.p2	4.027	+	DQ187313 NM_001098202	-204097	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-205256	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-218346	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	43158	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	43386	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	43598	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.169995	
chr6	120377369	120377512	reg1035566.p2	4.027	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-706519	-	BX538186 AK091682 AX747126 NM_001100411	-907094	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-977532	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	1278203	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	1379385	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	2343255	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.223841	
chr7	129592919	129593019	reg1035697.p2	4.027	+	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	-160	-	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	-218	-	L22454 NM_001040110	-323052	+	TSC_hg19_v1_chr7_-_129691215 BC000190 AB463378 AJ537494 AM393415 CU679956 BC011551 AF151050 AK001317 AK022373 NM_016478	98252	-	TSC_hg19_v1_chr7_+_129710381 BC044884 NM_014997 BC036464	117391	+	TSC_hg19_v1_chr7_+_129710402 D87454	117464	+	NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##L22454|NRF1|4899|nuclear respiratory factor 1##NM_001040110|NRF1|4899|nuclear respiratory factor 1##BC000190|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AJ537494|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AM393415|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC011551|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AF151050|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK001317|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK022373|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_016478|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC044884|KLHDC10|23008|kelch domain containing 10##NM_014997|KLHDC10|23008|kelch domain containing 10##BC036464|KLHDC10|23008|kelch domain containing 10##D87454|KLHDC10|23008|kelch domain containing 10	0.0	
chr8	142416378	142416522	reg1031581.p1	4.027	+	TSC_hg19_v1_chr8_+_142402120 AK311257	-14316	+	NM_005293	-39086	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	-152260	-	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	15611	+	BC144560 AK125848 AK131461 NM_207414	100867	-	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	1068087	-	NM_005293|GPR20|2843|G protein-coupled receptor 20##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1	0.048046	
chr8	144869036	144869173	reg1028661.p1	4.027	+	TSC_hg19_v1_chr8_+_144824624 AK091211 AX746851	-44472	+	TSC_hg19_v1_chr8_+_144816308 AK124079	-52802	+	TSC_hg19_v1_chr8_-_144815943 NM_198488 HM481257	-53163	-	AF240677 D63481 AB383767 AY062238 NM_015356 NM_182706	28440	-	TSC_hg19_v1_chr8_-_144911203 BC011265 NM_001136033 BC009734	42103	-	U51586 AF190744 CR457143 CU679161 TSC_hg19_v1_chr8_-_144911483 AF217197	42369	-	AK091211|LOC100128338|100128338|uncharacterized LOC100128338##AK124079|LOC100128338|100128338|uncharacterized LOC100128338##NM_198488|FAM83H|286077|family with sequence similarity 83, member H##AF240677|SCRIB|23513|scribbled homolog (Drosophila)##D63481|SCRIB|23513|scribbled homolog (Drosophila)##AY062238|SCRIB|23513|scribbled homolog (Drosophila)##NM_015356|SCRIB|23513|scribbled homolog (Drosophila)##NM_182706|SCRIB|23513|scribbled homolog (Drosophila)##BC011265|PUF60|22827|poly-U binding splicing factor 60KDa##NM_001136033|PUF60|22827|poly-U binding splicing factor 60KDa##BC009734|PUF60|22827|poly-U binding splicing factor 60KDa##U51586|PUF60|22827|poly-U binding splicing factor 60KDa##AF190744|PUF60|22827|poly-U binding splicing factor 60KDa##CR457143|PUF60|22827|poly-U binding splicing factor 60KDa##AF217197|PUF60|22827|poly-U binding splicing factor 60KDa	0.986187	CTCF.p2:29:0.986
chr1	246729835	246729905	reg1035829.p1	4.026	+	TSC_hg19_v1_chr1_+_246729853 BX647629 AK074142	-24	+	TSC_hg19_v1_chr1_+_246729803 AK056563 AL834246	-65	+	TSC_hg19_v1_chr1_+_246729757 BC036200 BC010228	-125	+	NM_016002	157507	+	TSC_hg19_v1_chr1_+_246887713 AK075178 BC026185 CU693152 AF151807	157787	+	TSC_hg19_v1_chr1_-_247054277 AL833491	324425	-	BX647629|CNST|163882|consortin, connexin sorting protein##AK074142|CNST|163882|consortin, connexin sorting protein##AK056563|CNST|163882|consortin, connexin sorting protein##AL834246|CNST|163882|consortin, connexin sorting protein##BC036200|CNST|163882|consortin, connexin sorting protein##BC010228|CNST|163882|consortin, connexin sorting protein##NM_016002|SCCPDH|51097|saccharopine dehydrogenase (putative)##AK075178|SCCPDH|51097|saccharopine dehydrogenase (putative)##BC026185|SCCPDH|51097|saccharopine dehydrogenase (putative)##AF151807|SCCPDH|51097|saccharopine dehydrogenase (putative)##AL833491|AHCTF1|25909|AT hook containing transcription factor 1	0.0	
chr16	85970223	85970404	reg1029649.p4	4.026	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-37527	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-136978	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-137008	+	TSC_hg19_v1_chr16_-_86542463 AK091834	572151	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	573843	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	573927	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.0	
chr2	231809149	231809330	reg1036372.p2	4.026	+	BC032694 NM_005683	-19299	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-79517	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-79561	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	51653	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	92998	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	112338	+	BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.027038	
chr3	96737688	96737860	reg1035605.p1	4.026	+	NM_001080448 TSC_hg19_v1_chr3_+_96533435 AK092565 AX747601	-204344	+	AK122674 NM_001195643	-2955708	-	TSC_hg19_v1_chr3_+_93781863 AF169972 BC018432 BC020602 BC057238 NM_022072 AK026262	-2955930	+	AK302040 AK310249 BC031881 BC067287 AK302080 AL133666 NM_173655	420697	+	TSC_hg19_v1_chr3_+_97483617 BC024239 NM_032146 NM_177976 AK292958 AK310829 AK311281	745826	+	TSC_hg19_v1_chr3_+_97540854 AK296966	803096	+	NM_001080448|EPHA6|285220|EPH receptor A6##AK092565|EPHA6|285220|EPH receptor A6##AK122674|DHFRL1|200895|dihydrofolate reductase-like 1##NM_001195643|DHFRL1|200895|dihydrofolate reductase-like 1##AF169972|NSUN3|63899|NOP2/Sun domain family, member 3##BC018432|NSUN3|63899|NOP2/Sun domain family, member 3##BC020602|NSUN3|63899|NOP2/Sun domain family, member 3##BC057238|NSUN3|63899|NOP2/Sun domain family, member 3##NM_022072|NSUN3|63899|NOP2/Sun domain family, member 3##AK026262|NSUN3|63899|NOP2/Sun domain family, member 3##AK302040|EPHA6|285220|EPH receptor A6##AK310249|EPHA6|285220|EPH receptor A6##BC031881|EPHA6|285220|EPH receptor A6##BC067287|EPHA6|285220|EPH receptor A6##AK302080|EPHA6|285220|EPH receptor A6##AL133666|EPHA6|285220|EPH receptor A6##NM_173655|EPHA6|285220|EPH receptor A6##BC024239|ARL6|84100|ADP-ribosylation factor-like 6##NM_032146|ARL6|84100|ADP-ribosylation factor-like 6##NM_177976|ARL6|84100|ADP-ribosylation factor-like 6##AK292958|ARL6|84100|ADP-ribosylation factor-like 6##AK310829|ARL6|84100|ADP-ribosylation factor-like 6##AK296966|CRYBG3|131544|beta-gamma crystallin domain containing 3	0.012511	
chr5	142304290	142304470	reg1016199.p2	4.026	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-154072	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-154408	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-226809	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	478443	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	478726	-	BC015610 TSC_hg19_v1_chr5_-_142783214	478831	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr5	79378710	79378838	reg1008004.p1	4.026	+	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-47610	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-91816	-	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-393102	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	173111	-	NM_032567 AK098575 AK314007 AF333098 BC033798	237041	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	325079	+	BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16	0.987805	CTCF.p2:43:0.988
chr1	226850473	226850641	reg1027268.p1	4.025	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-113940	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-114056	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-254754	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	76381	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	207723	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	277389	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.054173	
chr16	10869291	10869472	reg1022642.p2	4.025	+	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-31677	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-80616	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	-194891	-	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	43167	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	101731	+	BC071683 TSC_hg19_v1_chr16_-_11036171	166785	-	AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)	0.0	
chr16	14952817	14952921	reg1033536.p1	4.025	+	TSC_hg19_v1_chr16_+_14927721 X57398	-25109	+	TSC_hg19_v1_chr16_+_14927651 NM_014287 BC065535	-25226	+	BC106731 BC106732 BC111804 NM_003561 U95301	-164392	-	AB528194 AF132984 NM_006985	78430	+	NM_015027 TSC_hg19_v1_chr16_+_15068894 BC045554 BC053946	115997	+	TSC_hg19_v1_chr16_+_15068931 BC033748	116070	+	X57398|NOMO1|23420|NODAL modulator 1##NM_014287|NOMO1|23420|NODAL modulator 1##BC065535|NOMO1|23420|NODAL modulator 1##BC106731|PLA2G10|8399|phospholipase A2, group X##BC106732|PLA2G10|8399|phospholipase A2, group X##BC111804|PLA2G10|8399|phospholipase A2, group X##NM_003561|PLA2G10|8399|phospholipase A2, group X##U95301|PLA2G10|8399|phospholipase A2, group X##AF132984|NPIP|9284|nuclear pore complex interacting protein##NM_006985|NPIP|9284|nuclear pore complex interacting protein##NM_015027|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC045554|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC053946|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC033748|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1	0.462608	CTCF.p2:-8:0.402
chr17	16311453	16311633	reg1027061.p1	4.025	+	AK129498 BC015127 BC026301 BC031027 BC038999 TSC_hg19_v1_chr17_+_16284408 BC046123 BC009301	-27129	+	TSC_hg19_v1_chr17_+_16284404 AK300882	-27141	+	TSC_hg19_v1_chr17_+_16284371 BC000379 NM_018955	-27179	+	TSC_hg19_v1_chr17_+_16318881 AK289705 NM_016113 BC018926 BC051305	7330	+	TSC_hg19_v1_chr17_+_16318917 AK001896	7375	+	TSC_hg19_v1_chr17_+_16319096 AF103906	7562	+	AK129498|UBB|7314|ubiquitin B##BC015127|UBB|7314|ubiquitin B##BC026301|UBB|7314|ubiquitin B##BC031027|UBB|7314|ubiquitin B##BC038999|UBB|7314|ubiquitin B##BC046123|UBB|7314|ubiquitin B##BC009301|UBB|7314|ubiquitin B##AK300882|UBB|7314|ubiquitin B##BC000379|UBB|7314|ubiquitin B##NM_018955|UBB|7314|ubiquitin B##AK289705|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##NM_016113|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##BC018926|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##BC051305|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AK001896|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AF103906|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2	0.0	
chr5	131617664	131617794	reg1034217.p1	4.025	+	AK225407 X93510 TSC_hg19_v1_chr5_+_131593388 BC003096 AB528934 BT007019 CU677715	-24322	+	TSC_hg19_v1_chr5_+_131593377 AK313508 AF153882	-24348	+	TSC_hg19_v1_chr5_+_131593340 BC016765 NM_001131027 NM_003687 AF154335	-24376	+	TSC_hg19_v1_chr5_+_131630078 AK309243 BC028313 NM_003059 Y09881 AB007448 AB529182 DQ890816 DQ893972	12457	+	TSC_hg19_v1_chr5_-_131630942 BC030525	13244	-	BX538252 TSC_hg19_v1_chr5_-_131705330	87570	-	AK225407|PDLIM4|8572|PDZ and LIM domain 4##X93510|PDLIM4|8572|PDZ and LIM domain 4##BC003096|PDLIM4|8572|PDZ and LIM domain 4##BT007019|PDLIM4|8572|PDZ and LIM domain 4##AK313508|PDLIM4|8572|PDZ and LIM domain 4##AF153882|PDLIM4|8572|PDZ and LIM domain 4##BC016765|PDLIM4|8572|PDZ and LIM domain 4##NM_001131027|PDLIM4|8572|PDZ and LIM domain 4##NM_003687|PDLIM4|8572|PDZ and LIM domain 4##AF154335|PDLIM4|8572|PDZ and LIM domain 4##BC028313|SLC22A4|6583|solute carrier family 22 (organic cation/ergothioneine transporter), member 4##NM_003059|SLC22A4|6583|solute carrier family 22 (organic cation/ergothioneine transporter), member 4##Y09881|SLC22A4|6583|solute carrier family 22 (organic cation/ergothioneine transporter), member 4##AB007448|SLC22A4|6583|solute carrier family 22 (organic cation/ergothioneine transporter), member 4##DQ890816|SLC22A4|6583|solute carrier family 22 (organic cation/ergothioneine transporter), member 4##DQ893972|SLC22A4|6583|solute carrier family 22 (organic cation/ergothioneine transporter), member 4##BX538252|LOC553103|553103|uncharacterized LOC553103	0.992087	CTCF.p2:6:0.992
chr5	137087699	137087815	reg1035131.p1	4.025	+	AK098190 BC034035 NM_017415 TSC_hg19_v1_chr5_-_137071807	-15996	-	AF208068 AK314707 TSC_hg19_v1_chr5_-_137071541 AB032955	-16252	-	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	-252777	-	TSC_hg19_v1_chr5_-_137088952 BC012490	1199	-	L10372 TSC_hg19_v1_chr5_-_137089473	1698	-	AB528924 CR456986 BC007271 BC009284 TSC_hg19_v1_chr5_-_137089840	2046	-	BC034035|KLHL3|26249|kelch-like 3 (Drosophila)##NM_017415|KLHL3|26249|kelch-like 3 (Drosophila)##AF208068|KLHL3|26249|kelch-like 3 (Drosophila)##AK314707|KLHL3|26249|kelch-like 3 (Drosophila)##AB032955|KLHL3|26249|kelch-like 3 (Drosophila)##AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC012490|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##L10372|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##CR456986|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC007271|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0##BC009284|HNRNPA0|10949|heterogeneous nuclear ribonucleoprotein A0	0.994334	CTCF.p2:-12:0.994
chr7	100781772	100781952	reg1014320.p2	4.025	+	NM_000602 NM_001165413 TSC_hg19_v1_chr7_+_100770384 AK293248 AK297728 AK298048 AK316225 BC020765 X04729 BC010860 X04429 X12701 BC005927 M16006	-11448	+	BC005847 TSC_hg19_v1_chr7_+_100728767 AK092927 AX747810 BC048194 NM_030961 BC011882	-53102	+	TSC_hg19_v1_chr7_+_100663360 AJ606307 AJ606308 NM_001040105	-118497	+	NM_001283 TSC_hg19_v1_chr7_+_100797756 AK312151 BC003561 AB015319	15866	+	BC063835 BC044212 TSC_hg19_v1_chr7_-_100808851 AK225839 NM_003378 BC036537	26990	-	BC037583 BC104841 AK096556 NM_198571	41663	-	NM_000602|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001165413|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK293248|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK297728|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK298048|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK316225|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC020765|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04729|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC010860|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04429|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X12701|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC005927|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##M16006|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC005847|TRIM56|81844|tripartite motif containing 56##BC048194|TRIM56|81844|tripartite motif containing 56##NM_030961|TRIM56|81844|tripartite motif containing 56##BC011882|TRIM56|81844|tripartite motif containing 56##AJ606307|MUC17|140453|mucin 17, cell surface associated##AJ606308|MUC17|140453|mucin 17, cell surface associated##NM_001040105|MUC17|140453|mucin 17, cell surface associated##NM_001283|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AK312151|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC003561|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AB015319|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC063835|VGF|7425|VGF nerve growth factor inducible##BC044212|VGF|7425|VGF nerve growth factor inducible##AK225839|VGF|7425|VGF nerve growth factor inducible##NM_003378|VGF|7425|VGF nerve growth factor inducible##BC036537|VGF|7425|VGF nerve growth factor inducible##BC037583|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##BC104841|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##AK096556|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)##NM_198571|NAT16|375607|N-acetyltransferase 16 (GCN5-related, putative)	0.0	
chr10	125984833	125984931	reg1035714.p1	4.024	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	-131729	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-132983	-	BC137492 BC146862 AY358565 NM_198148	-333386	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	122591	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	122636	-	NM_001146340 TSC_hg19_v1_chr10_-_126138606	153695	-	BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##NM_001146340|NKX1-2|390010|NK1 homeobox 2	0.572853	CTCF.p2:9:0.573
chr11	133273888	133274016	reg1036603.p1	4.024	+	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-460347	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-460938	-	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1492613	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	128362	-	AF521713 AK098717 NM_174927 BC058039	441429	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	552930	-	AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B	0.923723	CTCF.p2:-7:0.924
chr11_gl000202_random	16535	16716	reg1000726.p2	4.024	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr1	203350350	203350530	reg1035240.p2	4.024	+	TSC_hg19_v1_chr1_-_203320290 NM_002023	-30152	-	AK172740 TSC_hg19_v1_chr1_-_203320256	-30179	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	-30231	-	NM_002725 NM_201348 TSC_hg19_v1_chr1_+_203444937	94469	+	U29089 BC032498 TSC_hg19_v1_chr1_+_203444965	94520	+	AJ133790 AY077681 NM_014359 AF161702	112841	+	NM_002023|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin##NM_002725|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_201348|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##U29089|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##BC032498|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin	0.0	
chr12	6556129	6556195	reg1036121.p2	4.024	+	AK315732 NM_001242 BC012160 M63928 DQ892296 EU176659 AB590221 CU680244	-2016	+	TSC_hg19_v1_chr12_+_6493333 AK095418 BC026262 AK027080 L04270 NM_002342 AB527559 DQ891995 DQ895185 CU693188	-62790	+	AK304379 NM_001159575	-69640	-	NM_018009 TSC_hg19_v1_chr12_+_6561272 BC015017 AK223163 AK001005 AK002056 AK222956 AK098035 HQ258015	5132	+	TSC_hg19_v1_chr12_-_6579844 AF060538 BC023286 AK289498 AK296294 AK303137 AK309184 NM_014231 NM_016830 NM_199245	23652	-	BC000191 TSC_hg19_v1_chr12_-_6602417 BC014329 AB049959 AF151075 AF212248 NM_016497	46282	-	AK315732|CD27|939|CD27 molecule##NM_001242|CD27|939|CD27 molecule##BC012160|CD27|939|CD27 molecule##M63928|CD27|939|CD27 molecule##DQ892296|CD27|939|CD27 molecule##EU176659|CD27|939|CD27 molecule##AK095418|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##BC026262|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK027080|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##L04270|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##NM_002342|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ891995|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ895185|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK304379|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001159575|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_018009|TAPBPL|55080|TAP binding protein-like##BC015017|TAPBPL|55080|TAP binding protein-like##AK223163|TAPBPL|55080|TAP binding protein-like##AK001005|TAPBPL|55080|TAP binding protein-like##AK002056|TAPBPL|55080|TAP binding protein-like##AK222956|TAPBPL|55080|TAP binding protein-like##AK098035|TAPBPL|55080|TAP binding protein-like##HQ258015|TAPBPL|55080|TAP binding protein-like##AF060538|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC023286|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK289498|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK296294|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK303137|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK309184|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_014231|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_016830|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_199245|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC000191|MRPL51|51258|mitochondrial ribosomal protein L51##BC014329|MRPL51|51258|mitochondrial ribosomal protein L51##AB049959|MRPL51|51258|mitochondrial ribosomal protein L51##AF151075|MRPL51|51258|mitochondrial ribosomal protein L51##AF212248|MRPL51|51258|mitochondrial ribosomal protein L51##NM_016497|MRPL51|51258|mitochondrial ribosomal protein L51	0.0	
chr12	923651	923831	reg1004188.p2	4.024	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	-60985	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	-61585	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-151026	-	BC013629 TSC_hg19_v1_chr12_+_1017145	93341	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	135085	-	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	176711	+	AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	0.0	
chr16	27417477	27417570	reg1022952.p2	4.024	+	AK292663 NM_181078 NM_181079 AK312825	-4036	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-76179	+	TSC_hg19_v1_chr16_+_27325301 BC110343 AK223591 X52425	-92205	+	NM_021798 AY358826 AF254067	21081	+	TSC_hg19_v1_chr16_-_27561218 BX648143	143695	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	143708	-	AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BC110343|IL4R|3566|interleukin 4 receptor##AK223591|IL4R|3566|interleukin 4 receptor##X52425|IL4R|3566|interleukin 4 receptor##NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.307706	CTCF.p2:20:0.308
chr19	597668	597800	reg1028234.p2	4.024	+	TSC_hg19_v1_chr19_+_589888 AJ012582 NM_001194 AF065164 DQ854815 AB527443	-7821	+	TSC_hg19_v1_chr19_+_572595 X64364 AY358113 BC009040 AB085790 AK296858 AK297880 D28441 D45131 AB072923 L10240 AB091680 M87879 AB463434	-25072	+	TSC_hg19_v1_chr19_+_572571 AF548371	-25163	+	TSC_hg19_v1_chr19_-_633520 AK307525 BC030829	35764	-	TSC_hg19_v1_chr19_-_633538 AK225723 AK225865 BC098387 U75370	35809	-	TSC_hg19_v1_chr19_-_633564 BC070057 NM_005035	35866	-	AJ012582|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##NM_001194|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##AF065164|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##DQ854815|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##X64364|BSG|682|basigin (Ok blood group)##AY358113|BSG|682|basigin (Ok blood group)##BC009040|BSG|682|basigin (Ok blood group)##AB085790|BSG|682|basigin (Ok blood group)##AK296858|BSG|682|basigin (Ok blood group)##AK297880|BSG|682|basigin (Ok blood group)##D28441|BSG|682|basigin (Ok blood group)##D45131|BSG|682|basigin (Ok blood group)##AB072923|BSG|682|basigin (Ok blood group)##L10240|BSG|682|basigin (Ok blood group)##AB091680|BSG|682|basigin (Ok blood group)##M87879|BSG|682|basigin (Ok blood group)##AF548371|BSG|682|basigin (Ok blood group)##AK307525|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC030829|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##AK225723|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##AK225865|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC098387|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##U75370|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC070057|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##NM_005035|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)	0.0	
chr2	127838972	127839059	reg1031188.p1	4.024	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-425223	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-425308	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-3056151	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	25726	-	BC039307 NM_001001665	124327	-	AK131190 TSC_hg19_v1_chr2_-_127977781	138702	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.0	
chr2	152803823	152803930	reg1031708.p1	4.024	+	TSC_hg19_v1_chr2_-_152684998 NM_001037174 NM_012097 NM_177985	-118880	-	TSC_hg19_v1_chr2_-_152684936 AF087889 AK298937	-118930	-	TSC_hg19_v1_chr2_-_152684901 AK292714 BC001254	-118973	-	AY054985 AK290049 NM_001005747	26590	-	AK294398 AK316045 TSC_hg19_v1_chr2_-_152955250 NM_001005746	151354	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	151671	-	NM_001037174|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_012097|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_177985|ARL5A|26225|ADP-ribosylation factor-like 5A##AF087889|ARL5A|26225|ADP-ribosylation factor-like 5A##AK298937|ARL5A|26225|ADP-ribosylation factor-like 5A##AK292714|ARL5A|26225|ADP-ribosylation factor-like 5A##BC001254|ARL5A|26225|ADP-ribosylation factor-like 5A##AY054985|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK290049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005747|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	0.026691	
chr2	157394635	157394707	reg1034477.p1	4.024	+	TSC_hg19_v1_chr2_+_157292921 U12424 BC019874	-101717	+	TSC_hg19_v1_chr2_+_157292894 NM_000408 AK292817	-101805	+	TSC_hg19_v1_chr2_+_157292178 AB209399 U36310 AK299645	-102437	+	BC142676 BC142703 AY277591 NM_014568 AK292154 BC144211	719622	+	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	787613	-	NM_001009959 AK296477	789485	-	U12424|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC019874|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_000408|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK292817|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AB209399|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U36310|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK299645|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein	0.0	
chr2	216418766	216418946	reg1035086.p1	4.024	+	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-118074	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-118336	-	AF312399 TSC_hg19_v1_chr2_-_216290008	-128884	-	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	459480	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	527688	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	527836	+	BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##AF312399|FN1|2335|fibronectin 1##AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169	0.85685	CTCF.p2:37:0.857
chr22	19072765	19072911	reg1033432.p1	4.024	+	TSC_hg19_v1_chr22_+_18957980 AB051434	-114832	+	BC118597 BC121809 NM_001195226 NM_016335 U79754	-148824	-	AB209472 TSC_hg19_v1_chr22_-_18923807 BC068260 BC094736 BC036534	-149107	-	CU012993 CU013281 CU691894 DQ894160 FJ032369 CR456433 L77560 X83545 TSC_hg19_v1_chr22_-_19109911 BC032430 D79985	36976	-	TSC_hg19_v1_chr22_-_19109938 BC020339 BC035425 CR936871 AK291670 AK295697 AK296337 AK304382 AK303130 BC040500 NM_001173533 NM_001173534 NM_001184781 NM_005137	37102	-	L77564 NM_053006	45482	+	AB051434|DGCR5|26220|DiGeorge syndrome critical region gene 5 (non-protein coding)##BC118597|PRODH|5625|proline dehydrogenase (oxidase) 1##BC121809|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_001195226|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_016335|PRODH|5625|proline dehydrogenase (oxidase) 1##U79754|PRODH|5625|proline dehydrogenase (oxidase) 1##AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1##BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1##BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1##BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1##CU012993|DGCR2|9993|DiGeorge syndrome critical region gene 2##CU013281|DGCR2|9993|DiGeorge syndrome critical region gene 2##DQ894160|DGCR2|9993|DiGeorge syndrome critical region gene 2##FJ032369|DGCR2|9993|DiGeorge syndrome critical region gene 2##CR456433|DGCR2|9993|DiGeorge syndrome critical region gene 2##L77560|DGCR2|9993|DiGeorge syndrome critical region gene 2##X83545|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC032430|DGCR2|9993|DiGeorge syndrome critical region gene 2##D79985|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC020339|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC035425|DGCR2|9993|DiGeorge syndrome critical region gene 2##CR936871|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK291670|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK295697|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK296337|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK304382|DGCR2|9993|DiGeorge syndrome critical region gene 2##AK303130|DGCR2|9993|DiGeorge syndrome critical region gene 2##BC040500|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001173533|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001173534|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_001184781|DGCR2|9993|DiGeorge syndrome critical region gene 2##NM_005137|DGCR2|9993|DiGeorge syndrome critical region gene 2##L77564|TSSK2|23617|testis-specific serine kinase 2##NM_053006|TSSK2|23617|testis-specific serine kinase 2	0.709011	CTCF.p2:-15:0.694
chr3	196370076	196370154	reg1032789.p1	4.024	+	BC044233 NM_198565 TSC_hg19_v1_chr3_+_196366658 AY358322	-3453	+	TSC_hg19_v1_chr3_+_196366647 BC034704	-3470	+	TSC_hg19_v1_chr3_+_196295733 NM_001105573	-74383	+	AK058155 TSC_hg19_v1_chr3_-_196439156 BC007827 AY099509 NM_032898 AK314070	69001	-	TSC_hg19_v1_chr3_+_196439214 NM_001166304 NM_017861 AK000529 BC022542	69144	+	TSC_hg19_v1_chr3_+_196466727 NM_002577	96610	+	BC044233|LRRC33|375387|leucine rich repeat containing 33##NM_198565|LRRC33|375387|leucine rich repeat containing 33##AY358322|LRRC33|375387|leucine rich repeat containing 33##BC034704|LRRC33|375387|leucine rich repeat containing 33##NM_001105573|FBXO45|200933|F-box protein 45##AK058155|CEP19|84984|centrosomal protein 19kDa##BC007827|CEP19|84984|centrosomal protein 19kDa##AY099509|CEP19|84984|centrosomal protein 19kDa##NM_032898|CEP19|84984|centrosomal protein 19kDa##AK314070|CEP19|84984|centrosomal protein 19kDa##NM_001166304|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##NM_017861|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##AK000529|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##BC022542|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##NM_002577|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2	0.0	
chr5	43232167	43232287	reg1033965.p1	4.024	+	BC036422 NM_153361	-39901	+	AK057343 NM_003432 TSC_hg19_v1_chr5_+_43121669 AK310735 BC017923	-110543	+	TSC_hg19_v1_chr5_+_43121609 AK299315 AK307977	-110613	+	BC000297 BC082234 M15802 X66435 TSC_hg19_v1_chr5_-_43313515 AK095492 AK315593	81304	-	TSC_hg19_v1_chr5_-_43313581 NM_001098272 NM_002130	81369	-	TSC_hg19_v1_chr5_-_43397231 AK307307	164999	-	BC036422|NIM1|167359|serine/threonine-protein kinase NIM1##NM_153361|NIM1|167359|serine/threonine-protein kinase NIM1##AK057343|ZNF131|7690|zinc finger protein 131##NM_003432|ZNF131|7690|zinc finger protein 131##AK310735|ZNF131|7690|zinc finger protein 131##BC017923|ZNF131|7690|zinc finger protein 131##AK299315|ZNF131|7690|zinc finger protein 131##AK307977|ZNF131|7690|zinc finger protein 131##BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##M15802|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK307307|CCL28|56477|chemokine (C-C motif) ligand 28	0.062962	
chr6	36326334	36326514	reg1033039.p2	4.024	+	BC140873 BX648558 NM_001010903 TSC_hg19_v1_chr6_-_36304663	-21799	-	AM182887 FJ457781 NM_001145717	-88188	+	AK096074 NM_173676 BC103905 BC103906 BC103907 NM_001145716	-115463	+	AF175387 AF218365 AF116508 AF116509 AF116510 AF218235 AF218366 BC035853 AK301011 AF147782 AK223424 AJ276205 AK026144 NM_001207038 AK303829 NM_001207035 NM_001207036 NM_001207037 NM_001207039 NM_001207040 NM_001207041 NM_016135	29035	-	BC031105 NM_152990	84241	-	AY305862 NM_173562 TSC_hg19_v1_chr6_+_36410797 AK295717 AK316456	84246	+	BC140873|C6orf222|389384|chromosome 6 open reading frame 222##BX648558|C6orf222|389384|chromosome 6 open reading frame 222##NM_001010903|C6orf222|389384|chromosome 6 open reading frame 222##AM182887|PNPLA1|285848|patatin-like phospholipase domain containing 1##FJ457781|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145717|PNPLA1|285848|patatin-like phospholipase domain containing 1##AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1##AF175387|ETV7|51513|ets variant 7##AF218365|ETV7|51513|ets variant 7##AF116508|ETV7|51513|ets variant 7##AF116509|ETV7|51513|ets variant 7##AF116510|ETV7|51513|ets variant 7##AF218235|ETV7|51513|ets variant 7##AF218366|ETV7|51513|ets variant 7##BC035853|ETV7|51513|ets variant 7##AK301011|ETV7|51513|ets variant 7##AF147782|ETV7|51513|ets variant 7##AK223424|ETV7|51513|ets variant 7##AJ276205|ETV7|51513|ets variant 7##AK026144|ETV7|51513|ets variant 7##NM_001207038|ETV7|51513|ets variant 7##AK303829|ETV7|51513|ets variant 7##NM_001207035|ETV7|51513|ets variant 7##NM_001207036|ETV7|51513|ets variant 7##NM_001207037|ETV7|51513|ets variant 7##NM_001207039|ETV7|51513|ets variant 7##NM_001207040|ETV7|51513|ets variant 7##NM_001207041|ETV7|51513|ets variant 7##NM_016135|ETV7|51513|ets variant 7##BC031105|PXT1|222659|peroxisomal, testis specific 1##NM_152990|PXT1|222659|peroxisomal, testis specific 1##AY305862|KCTD20|222658|potassium channel tetramerisation domain containing 20##NM_173562|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK295717|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK316456|KCTD20|222658|potassium channel tetramerisation domain containing 20	0.0	
chr6	8524812	8524896	reg1045494.p1	4.024	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-88966	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-89146	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-422064	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	1887762	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	1890421	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	1890614	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.0	
chr10	130430187	130430289	reg1028790.p1	4.023	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-505710	-	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	-584384	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-724783	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	835233	+	TSC_hg19_v1_chr10_+_131265507 BC000824	835276	+	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	1331815	-	NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3	0.0	
chr10	14701872	14702052	reg1029556.p1	4.023	+	TSC_hg19_v1_chr10_-_14646423 BC072452	-55533	-	TSC_hg19_v1_chr10_-_14646259 BC064407	-55645	-	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	-329112	-	AK127413 NM_031453	114933	-	TSC_hg19_v1_chr10_-_14880025 BC133042 BC133044 BC144619 NM_001029954 AK301259	178060	-	TSC_hg19_v1_chr10_+_14880314 BC108738 NM_016299 AK225265 AK225651 AK302452 AK000880 BC065281 BC038845	178273	+	BC072452|FAM107B|83641|family with sequence similarity 107, member B##BC064407|FAM107B|83641|family with sequence similarity 107, member B##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##AK127413|FAM107B|83641|family with sequence similarity 107, member B##NM_031453|FAM107B|83641|family with sequence similarity 107, member B##BC133042|CDNF|441549|cerebral dopamine neurotrophic factor##BC133044|CDNF|441549|cerebral dopamine neurotrophic factor##BC144619|CDNF|441549|cerebral dopamine neurotrophic factor##NM_001029954|CDNF|441549|cerebral dopamine neurotrophic factor##BC108738|HSPA14|51182|heat shock 70kDa protein 14##NM_016299|HSPA14|51182|heat shock 70kDa protein 14##AK225265|HSPA14|51182|heat shock 70kDa protein 14##AK225651|HSPA14|51182|heat shock 70kDa protein 14##AK302452|HSPA14|51182|heat shock 70kDa protein 14##AK000880|HSPA14|51182|heat shock 70kDa protein 14##BC065281|HSPA14|51182|heat shock 70kDa protein 14##BC038845|HSPA14|51182|heat shock 70kDa protein 14	0.0	
chr11	2548432	2548540	reg1032802.p1	4.023	+	TSC_hg19_v1_chr11_+_2466237 AF000571 NM_000218 EF010934 AB464057 AY114213 U86146	-82237	+	AJ270996 BC093787 BC093789 BC143351 BC143353 AF177473 NM_014555	-104229	-	AF125568 NM_005706	-124964	+	BC007733 TSC_hg19_v1_chr11_-_2560881	12361	-	AK123073 TSC_hg19_v1_chr11_-_2721223	172739	-	U22398 BC039188 NM_000076 NM_001122630 NM_001122631 TSC_hg19_v1_chr11_-_2907004 BC067842	358508	-	AF000571|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##NM_000218|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##EF010934|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AY114213|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##U86146|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AJ270996|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093787|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093789|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143351|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143353|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF177473|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##NM_014555|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF125568|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_005706|TSSC4|10078|tumor suppressing subtransferable candidate 4##AK123073|KCNQ1OT1|10984|KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)##U22398|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC039188|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_000076|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122630|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122631|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC067842|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)	0.146163	
chr15	75387617	75387797	reg1026906.p1	4.023	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-71726	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-71779	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-99800	+	AK128205 TSC_hg19_v1_chr15_+_75491259	103539	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	106505	+	BC110367 TSC_hg19_v1_chr15_+_75494233	106526	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chr16	10914988	10915129	reg1021843.p1	4.023	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	-2510	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-77354	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-126293	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	56054	+	BC071683 TSC_hg19_v1_chr16_-_11036171	121108	-	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	121177	-	BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)	0.0	
chr16	7075750	7075844	reg1034960.p1	4.023	+	AK001027 NM_001142334	-251988	+	TSC_hg19_v1_chr16_+_6533765 BC033885	-542022	+	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	-1006572	+	AF094849 AF109106 AF229057 NM_145891 NM_145892 NM_145893	306953	+	TSC_hg19_v1_chr16_+_8715563 NM_024109 AK315383 BC001908 AK022495	1639743	+	TSC_hg19_v1_chr16_+_8768473 NM_020686 BX537362 AK096146 BC031413 BC015628	1692665	+	AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_024109|METTL22|79091|methyltransferase like 22##AK315383|METTL22|79091|methyltransferase like 22##BC001908|METTL22|79091|methyltransferase like 22##AK022495|METTL22|79091|methyltransferase like 22##NM_020686|ABAT|18|4-aminobutyrate aminotransferase##BX537362|ABAT|18|4-aminobutyrate aminotransferase##AK096146|ABAT|18|4-aminobutyrate aminotransferase##BC031413|ABAT|18|4-aminobutyrate aminotransferase##BC015628|ABAT|18|4-aminobutyrate aminotransferase	0.999862	CTCF.p2:-6:1.000
chr20	25175948	25176128	reg1032702.p1	4.023	+	BC126228 BC136497 AF251033 AF251034 DQ854807 DQ854808 DQ854809 DQ854810 DQ854811 DQ854812 NM_014588 NM_199425	-113277	-	AL832939 BC114612 AK314440 TSC_hg19_v1_chr20_-_25038780 BC044588 BC055008 AK127566 BC039261 NM_001252675 NM_001252677 NM_032501	-137359	-	AK125058 AK296306 NM_001252676	-162714	-	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	332	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	442	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	52720	+	BC126228|VSX1|30813|visual system homeobox 1##BC136497|VSX1|30813|visual system homeobox 1##AF251033|VSX1|30813|visual system homeobox 1##AF251034|VSX1|30813|visual system homeobox 1##DQ854807|VSX1|30813|visual system homeobox 1##DQ854808|VSX1|30813|visual system homeobox 1##DQ854809|VSX1|30813|visual system homeobox 1##DQ854810|VSX1|30813|visual system homeobox 1##DQ854811|VSX1|30813|visual system homeobox 1##DQ854812|VSX1|30813|visual system homeobox 1##NM_014588|VSX1|30813|visual system homeobox 1##NM_199425|VSX1|30813|visual system homeobox 1##AL832939|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC114612|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK314440|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC044588|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC055008|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK127566|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##BC039261|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252675|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252677|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_032501|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK125058|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK296306|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##NM_001252676|ACSS1|84532|acyl-CoA synthetase short-chain family member 1##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain	0.048857	
chr3	155588363	155588475	reg1030057.p2	4.023	+	TSC_hg19_v1_chr3_+_155588290 NM_003875	-118	+	D88152 TSC_hg19_v1_chr3_-_155572196 BC014416 AK312268 NM_001190992 NM_004733	-16213	-	BC042198 AF115515 TSC_hg19_v1_chr3_-_155524068 BC064898 AK055701 NM_173657 AL832165 AK289890	-64358	-	TSC_hg19_v1_chr3_+_155588438 AK302148 AK223399 AK300787	15	+	TSC_hg19_v1_chr3_+_155588447 AK291504 BC012178	36	+	TSC_hg19_v1_chr3_+_155588481 AK315832 U10860 DQ896621 EU176462	150	+	NM_003875|GMPS|8833|guanine monphosphate synthetase##D88152|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##BC014416|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##AK312268|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##NM_001190992|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##NM_004733|SLC33A1|9197|solute carrier family 33 (acetyl-CoA transporter), member 1##BC042198|C3orf33|285315|chromosome 3 open reading frame 33##AF115515|C3orf33|285315|chromosome 3 open reading frame 33##BC064898|C3orf33|285315|chromosome 3 open reading frame 33##AK055701|C3orf33|285315|chromosome 3 open reading frame 33##NM_173657|C3orf33|285315|chromosome 3 open reading frame 33##AL832165|C3orf33|285315|chromosome 3 open reading frame 33##AK289890|C3orf33|285315|chromosome 3 open reading frame 33##AK302148|GMPS|8833|guanine monphosphate synthetase##AK223399|GMPS|8833|guanine monphosphate synthetase##AK300787|GMPS|8833|guanine monphosphate synthetase##AK291504|GMPS|8833|guanine monphosphate synthetase##BC012178|GMPS|8833|guanine monphosphate synthetase##AK315832|GMPS|8833|guanine monphosphate synthetase##U10860|GMPS|8833|guanine monphosphate synthetase##DQ896621|GMPS|8833|guanine monphosphate synthetase##EU176462|GMPS|8833|guanine monphosphate synthetase	0.07626	
chr5	171285456	171285571	reg1032119.p2	4.023	+	BC006245 TSC_hg19_v1_chr5_+_170847089 AB007422 AB528345 AF211188 AM393798 BT019570 BT019571 DQ892736 DQ895983	-438382	+	AY358811 AF075292 NM_003862	-438851	+	AB042278 AB451236 AB451361 AB463949 BT007011 CU676967 CU677717 CU680364 CU692436 DQ892032 DQ895223 EF429251 X16934 TSC_hg19_v1_chr5_+_170815031	-470522	+	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	148015	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	148131	-	BC026213 NM_012300 NM_033644 NM_033645	148363	-	BC006245|FGF18|8817|fibroblast growth factor 18##AB007422|FGF18|8817|fibroblast growth factor 18##AF211188|FGF18|8817|fibroblast growth factor 18##AM393798|FGF18|8817|fibroblast growth factor 18##BT019570|FGF18|8817|fibroblast growth factor 18##BT019571|FGF18|8817|fibroblast growth factor 18##DQ892736|FGF18|8817|fibroblast growth factor 18##DQ895983|FGF18|8817|fibroblast growth factor 18##AY358811|FGF18|8817|fibroblast growth factor 18##AF075292|FGF18|8817|fibroblast growth factor 18##NM_003862|FGF18|8817|fibroblast growth factor 18##AB042278|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451236|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451361|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BT007011|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ892032|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ895223|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##EF429251|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##X16934|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11	0.881322	CTCF.p2:-4:0.881
chr7	116570825	116571006	reg1003433.p2	4.023	+	TSC_hg19_v1_chr7_+_116502640 BC005338 AK293405 AK294409 AK315915 AK222989 AK223004 U03269 BC015963 BT006735 CU675123 U03851	-68283	+	AK314808 TSC_hg19_v1_chr7_+_116502591	-68324	+	TSC_hg19_v1_chr7_+_116502581 NM_006136	-68358	+	TSC_hg19_v1_chr7_+_116593397 BC075855 NM_018412 NM_021908 AF234882 AF234883	22470	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	22658	+	TSC_hg19_v1_chr7_+_116660271 AK093212	89352	+	BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK314808|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##NM_006136|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BC075855|ST7|7982|suppression of tumorigenicity 7##NM_018412|ST7|7982|suppression of tumorigenicity 7##NM_021908|ST7|7982|suppression of tumorigenicity 7##AF234882|ST7|7982|suppression of tumorigenicity 7##AF234883|ST7|7982|suppression of tumorigenicity 7##AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##AK093212|ST7|7982|suppression of tumorigenicity 7	0.0	
chr11	67227327	67227419	reg1023278.p1	4.022	+	AY039217 NM_145200	-4556	+	AY569571 BC119779 BC122869 NM_206997	-7174	-	NM_001018070	-16082	-	AK310743 TSC_hg19_v1_chr11_-_67236717 AK296988 AY007143 BC013883 BC051854 BC125134 AK303342 NM_001078650 NM_001078651 NM_025124 AK025402	9328	-	NM_003977 TSC_hg19_v1_chr11_+_67250510 U78521	23139	+	TSC_hg19_v1_chr11_+_67250595 BC104797 BC104827 U31913 AB529203 EU446613	23239	+	AY039217|CABP4|57010|calcium binding protein 4##NM_145200|CABP4|57010|calcium binding protein 4##AY569571|GPR152|390212|G protein-coupled receptor 152##BC119779|GPR152|390212|G protein-coupled receptor 152##BC122869|GPR152|390212|G protein-coupled receptor 152##NM_206997|GPR152|390212|G protein-coupled receptor 152##NM_001018070|CORO1B|57175|coronin, actin binding protein, 1B##AK310743|TMEM134|80194|transmembrane protein 134##AK296988|TMEM134|80194|transmembrane protein 134##AY007143|TMEM134|80194|transmembrane protein 134##BC013883|TMEM134|80194|transmembrane protein 134##BC051854|TMEM134|80194|transmembrane protein 134##BC125134|TMEM134|80194|transmembrane protein 134##AK303342|TMEM134|80194|transmembrane protein 134##NM_001078650|TMEM134|80194|transmembrane protein 134##NM_001078651|TMEM134|80194|transmembrane protein 134##NM_025124|TMEM134|80194|transmembrane protein 134##AK025402|TMEM134|80194|transmembrane protein 134##NM_003977|AIP|9049|aryl hydrocarbon receptor interacting protein##U78521|AIP|9049|aryl hydrocarbon receptor interacting protein##BC104797|AIP|9049|aryl hydrocarbon receptor interacting protein##BC104827|AIP|9049|aryl hydrocarbon receptor interacting protein##U31913|AIP|9049|aryl hydrocarbon receptor interacting protein##EU446613|AIP|9049|aryl hydrocarbon receptor interacting protein	0.033639	
chr13	99325202	99325304	reg1003525.p1	4.022	+	TSC_hg19_v1_chr13_-_99229363 BC035578 BC065378 NM_001032296	-95942	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	-96131	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	-96199	-	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	79652	-	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	305037	-	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	413438	-	BC035578|STK24|8428|serine/threonine kinase 24##BC065378|STK24|8428|serine/threonine kinase 24##NM_001032296|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9	0.987205	CTCF.p2:1:0.987
chr16	17376218	17376378	reg1036850.p1	4.022	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-1049768	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1049810	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-1049816	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	188507	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1197093	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1421798	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr16	50623294	50623474	reg1020966.p2	4.022	+	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	-41058	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	-220554	-	NM_001114 D25538	-301561	+	TSC_hg19_v1_chr16_-_50647562 AK124375	24194	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	91793	-	TSC_hg19_v1_chr16_-_50715246 NM_001144972 NM_153337 NM_182854	91917	-	BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20##NM_001144972|SNX20|124460|sorting nexin 20##NM_153337|SNX20|124460|sorting nexin 20##NM_182854|SNX20|124460|sorting nexin 20	0.0	
chr3	194408408	194408588	reg1028140.p1	4.022	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-995	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-1875	+	NM_018385	-15293	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	583352	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	755204	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	861615	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.0	
chr4	90032154	90032335	reg1016528.p1	4.022	+	CU687656 BC063126 BC041029 BC053569 BX647410 NM_014883	-54025	-	AB385402 AB020721 TSC_hg19_v1_chr4_-_89744384 AK027138 BC033006 BC086875 BC058029 AK296932 NM_001015045 AK091787 AX747185	-287963	-	BC104883 TSC_hg19_v1_chr4_-_89618996 AL834329 AK054689 BC022544 NM_153757	-413269	-	AK091881 AX747234 TSC_hg19_v1_chr4_-_90032571	315	-	AK027653 NM_145715	1723	+	AK124616 TSC_hg19_v1_chr4_-_90228950	196707	-	BC063126|FAM13A|10144|family with sequence similarity 13, member A##BC041029|FAM13A|10144|family with sequence similarity 13, member A##BC053569|FAM13A|10144|family with sequence similarity 13, member A##BX647410|FAM13A|10144|family with sequence similarity 13, member A##NM_014883|FAM13A|10144|family with sequence similarity 13, member A##AB020721|FAM13A|10144|family with sequence similarity 13, member A##AK027138|FAM13A|10144|family with sequence similarity 13, member A##BC033006|FAM13A|10144|family with sequence similarity 13, member A##BC086875|FAM13A|10144|family with sequence similarity 13, member A##BC058029|FAM13A|10144|family with sequence similarity 13, member A##AK296932|FAM13A|10144|family with sequence similarity 13, member A##NM_001015045|FAM13A|10144|family with sequence similarity 13, member A##AK091787|FAM13A|10144|family with sequence similarity 13, member A##BC104883|NAP1L5|266812|nucleosome assembly protein 1-like 5##AL834329|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK054689|NAP1L5|266812|nucleosome assembly protein 1-like 5##BC022544|NAP1L5|266812|nucleosome assembly protein 1-like 5##NM_153757|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK091881|FAM13A|10144|family with sequence similarity 13, member A##AK027653|TIGD2|166815|tigger transposable element derived 2##NM_145715|TIGD2|166815|tigger transposable element derived 2##AK124616|GPRIN3|285513|GPRIN family member 3	0.010847	
chr5	142588893	142589074	reg1035632.p2	4.022	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-438675	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-439011	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-511412	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	193840	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	194123	-	BC015610 TSC_hg19_v1_chr5_-_142783214	194228	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.308148	CTCF.p2:-27:0.308
chr6	2854821	2854929	reg1024858.p2	4.022	+	TSC_hg19_v1_chr6_-_2842202 AK304641 AK309765	-12678	-	TSC_hg19_v1_chr6_-_2842095 BC009015 NM_030666 M93056 AK298044 AK312973 AK223370 AK291327	-12793	-	TSC_hg19_v1_chr6_-_2840686 BT006928 AB590702	-14123	-	TSC_hg19_v1_chr6_-_2903544 BC002538 AB060690 L40378 AK314842 NM_004155	48633	-	AK098566 TSC_hg19_v1_chr6_-_2971511	116539	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	116936	-	AK304641|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK309765|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BT006928|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC002538|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AB060690|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##L40378|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK314842|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##NM_004155|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK098566|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6	0.0	
chr8	6548049	6548199	reg1029148.p1	4.022	+	HQ258258 AF187858 AB009865 BC126200 BC126202 BC143902 AF218015 BC022490 AK075219 AK225698 AK290070 AK310171 AK312541 NM_001118887 NM_001118888 NM_001147 TSC_hg19_v1_chr8_-_6420798 AJ289781	-127433	-	AK301702 TSC_hg19_v1_chr8_+_6264167	-283952	+	NM_001172574 NM_001172575 NM_024596 BC056195 BC030702 AK308387 TSC_hg19_v1_chr8_+_6264158	-283989	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	17767	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	17816	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	18059	+	HQ258258|ANGPT2|285|angiopoietin 2##AF187858|ANGPT2|285|angiopoietin 2##AB009865|ANGPT2|285|angiopoietin 2##BC126200|ANGPT2|285|angiopoietin 2##BC126202|ANGPT2|285|angiopoietin 2##BC143902|ANGPT2|285|angiopoietin 2##AF218015|ANGPT2|285|angiopoietin 2##BC022490|ANGPT2|285|angiopoietin 2##AK075219|ANGPT2|285|angiopoietin 2##AK225698|ANGPT2|285|angiopoietin 2##AK290070|ANGPT2|285|angiopoietin 2##AK310171|ANGPT2|285|angiopoietin 2##AK312541|ANGPT2|285|angiopoietin 2##NM_001118887|ANGPT2|285|angiopoietin 2##NM_001118888|ANGPT2|285|angiopoietin 2##NM_001147|ANGPT2|285|angiopoietin 2##AJ289781|ANGPT2|285|angiopoietin 2##AK301702|MCPH1|79648|microcephalin 1##NM_001172574|MCPH1|79648|microcephalin 1##NM_001172575|MCPH1|79648|microcephalin 1##NM_024596|MCPH1|79648|microcephalin 1##BC056195|MCPH1|79648|microcephalin 1##BC030702|MCPH1|79648|microcephalin 1##AK308387|MCPH1|79648|microcephalin 1##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	0.0	
chr9	134128087	134128241	reg1035352.p1	4.022	+	TSC_hg19_v1_chr9_+_134001016 D14689 AB159230	-127114	+	TSC_hg19_v1_chr9_+_134000975 BC105998 AK307573 NM_005085 AL832609 X64228 BC045620 BC012500	-127190	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	-156206	+	BC049388 NM_033387 AK095423	23755	-	TSC_hg19_v1_chr9_+_134165108 AK075207 NM_032728 BC006362 AK027568 AK315502 AB385550	37064	+	TSC_hg19_v1_chr9_+_134269515 BC002872	141402	+	D14689|NUP214|8021|nucleoporin 214kDa##AB159230|NUP214|8021|nucleoporin 214kDa##BC105998|NUP214|8021|nucleoporin 214kDa##AK307573|NUP214|8021|nucleoporin 214kDa##NM_005085|NUP214|8021|nucleoporin 214kDa##AL832609|NUP214|8021|nucleoporin 214kDa##X64228|NUP214|8021|nucleoporin 214kDa##BC045620|NUP214|8021|nucleoporin 214kDa##BC012500|NUP214|8021|nucleoporin 214kDa##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like##BC049388|FAM78A|286336|family with sequence similarity 78, member A##NM_033387|FAM78A|286336|family with sequence similarity 78, member A##AK095423|FAM78A|286336|family with sequence similarity 78, member A##AK075207|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##NM_032728|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC006362|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK027568|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK315502|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC002872|PRRC2B|84726|proline-rich coiled-coil 2B	0.070068	
chrX	49087039	49087163	reg1033425.p1	4.022	+	TSC_hg19_v1_chrX_-_49056653 AB464258 CU687900 AK313030 AK094376 AK295524 AK315953 BC064550 NM_003179	-30419	-	TSC_hg19_v1_chrX_+_49047887 CU687901	-39211	+	TSC_hg19_v1_chrX_-_49042854 AK299407	-44247	-	AF067227 JF701915 AF201304 AJ224874 NM_005183	2700	-	NM_014008 TSC_hg19_v1_chrX_+_49091929	4826	+	AK298264 TSC_hg19_v1_chrX_+_49091935 AK296911 AK291976	4847	+	AK313030|SYP|6855|synaptophysin##AK094376|SYP|6855|synaptophysin##AK295524|SYP|6855|synaptophysin##AK315953|SYP|6855|synaptophysin##BC064550|SYP|6855|synaptophysin##NM_003179|SYP|6855|synaptophysin##AK299407|PRICKLE3|4007|prickle homolog 3 (Drosophila)##AF067227|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##JF701915|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##AF201304|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##AJ224874|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##NM_005183|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##NM_014008|CCDC22|28952|coiled-coil domain containing 22##AK298264|CCDC22|28952|coiled-coil domain containing 22##AK296911|CCDC22|28952|coiled-coil domain containing 22##AK291976|CCDC22|28952|coiled-coil domain containing 22	0.0	
chr14	34318398	34318479	reg1004912.p1	4.021	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-909948	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1519902	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-1771932	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	101711	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	613049	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	690447	-	AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein	0.0	
chr15	85904494	85904608	reg1026279.p1	4.021	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-238233	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-379225	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-379314	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	19340	+	AF127481 NM_144767	315716	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	433546	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	0.0	
chr16	16119569	16119721	reg1026819.p2	4.021	+	TSC_hg19_v1_chr16_+_16043442 L05628 NM_004996 NM_019862 NM_019898 NM_019899 NM_019900 X78338	-76281	+	AL832498 TSC_hg19_v1_chr16_-_15982471	-137160	-	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	-137192	-	TSC_hg19_v1_chr16_+_16146613 HQ917065	26973	+	AF168791 AM711638 AM774324 BC050733 AF076622 BC131732 U66689 NM_001079528 NM_001171 AY078405 AK298295	197675	-	TSC_hg19_v1_chr16_+_16326401 NM_001004067	206752	+	L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##AL832498|FOPNL|123811|FGFR1OP N-terminal like##AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##AF168791|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM711638|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM774324|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC050733|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AF076622|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC131732|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001079528|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001171|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AY078405|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AK298295|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001004067|NOMO3|408050|NODAL modulator 3	0.0	
chr19	14459601	14459757	reg1003832.p2	4.021	+	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	-142631	-	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	-198879	-	TSC_hg19_v1_chr19_+_14247979 BX537706	-211688	+	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	32370	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	32576	+	TSC_hg19_v1_chr19_-_14529877 AK301847	70210	-	AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule##AK301847|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A	0.0	
chr2	62531080	62531260	reg1027105.p2	4.021	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-107904	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-398341	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-415384	-	BC047439 AK091902 AX747245 NM_198276	202369	-	AK292545 NM_001142615	369815	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	401796	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr3	23656709	23656812	reg1032869.p1	4.021	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	-412005	+	TSC_hg19_v1_chr3_+_23244600 AK307075	-412177	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-1242626	-	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	190650	+	AK314854 TSC_hg19_v1_chr3_+_23847474	190714	+	AK295354 NM_001202476	195173	+	AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK310298|ZNF385D|79750|zinc finger protein 385D##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##AK314854|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_001202476|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.0	
chr3	44118770	44118862	reg1015451.p1	4.021	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-386395	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-455303	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-455378	-	AK093476 AX748152 NM_001145030	164561	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	260814	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	261131	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.0	
chr6	164088849	164088972	reg1032135.p1	4.021	+	AL050218 TSC_hg19_v1_chr6_+_163984651	-104297	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	-252678	+	TSC_hg19_v1_chr6_+_163835795 AF272349	-253120	+	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	1634182	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	1986786	-	AY203946 TSC_hg19_v1_chr6_-_166076051	1987142	-	AL050218|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##AY203946|LOC100132188|100132188|LP7097	0.081977	
chr7	100609018	100609093	reg1003701.p2	4.021	+	BC105060 BC105062 BC143469 AK291321 TSC_hg19_v1_chr7_-_100493509 BC001541 AK223443 AF334270 BC026315 BC036813 NM_000665 NM_015831	-115544	-	BC017456 BC067904 AK292467 NM_001015072	-121750	-	TSC_hg19_v1_chr7_+_100472809 BC109116	-136229	+	AK130455 TSC_hg19_v1_chr7_+_100612694	3638	+	NM_001164462	3848	+	TSC_hg19_v1_chr7_+_100663360 AJ606307 AJ606308 NM_001040105	54310	+	BC105060|ACHE|43|acetylcholinesterase##BC105062|ACHE|43|acetylcholinesterase##BC143469|ACHE|43|acetylcholinesterase##AK291321|ACHE|43|acetylcholinesterase##BC001541|ACHE|43|acetylcholinesterase##AK223443|ACHE|43|acetylcholinesterase##AF334270|ACHE|43|acetylcholinesterase##BC026315|ACHE|43|acetylcholinesterase##BC036813|ACHE|43|acetylcholinesterase##NM_000665|ACHE|43|acetylcholinesterase##NM_015831|ACHE|43|acetylcholinesterase##BC017456|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##BC067904|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##AK292467|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##NM_001015072|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##BC109116|SRRT|51593|serrate RNA effector molecule homolog (Arabidopsis)##NM_001164462|MUC12|10071|mucin 12, cell surface associated##AJ606307|MUC17|140453|mucin 17, cell surface associated##AJ606308|MUC17|140453|mucin 17, cell surface associated##NM_001040105|MUC17|140453|mucin 17, cell surface associated	0.0	
chr1	156265614	156265795	reg1034269.p2	4.020	+	TSC_hg19_v1_chr1_-_156265459 BC011575	-245	-	BC036340 AY358450 AK296157 AK075349 BC018757 NM_144580 TSC_hg19_v1_chr1_-_156265450	-280	-	NM_032323 AK315767 AK056816	-11618	+	NM_001004319	3723	-	BC014605 NM_144627	41400	+	DQ893014 DQ896259 X74801 AB529021 AK316387 TSC_hg19_v1_chr1_-_156308031 AY524046 AK293477 AK300765 BC006501	42304	-	BC011575|C1orf85|112770|chromosome 1 open reading frame 85##BC036340|C1orf85|112770|chromosome 1 open reading frame 85##AY358450|C1orf85|112770|chromosome 1 open reading frame 85##AK296157|C1orf85|112770|chromosome 1 open reading frame 85##AK075349|C1orf85|112770|chromosome 1 open reading frame 85##BC018757|C1orf85|112770|chromosome 1 open reading frame 85##NM_144580|C1orf85|112770|chromosome 1 open reading frame 85##NM_032323|TMEM79|84283|transmembrane protein 79##AK315767|TMEM79|84283|transmembrane protein 79##AK056816|TMEM79|84283|transmembrane protein 79##NM_001004319|VHLL|391104|von Hippel-Lindau tumor suppressor-like##BC014605|C1orf182|128229|chromosome 1 open reading frame 182##NM_144627|C1orf182|128229|chromosome 1 open reading frame 182##DQ893014|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##DQ896259|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##X74801|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK316387|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AY524046|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK293477|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK300765|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##BC006501|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)	0.0	
chr1	178575115	178575248	reg1030536.p1	4.020	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-92915	+	AF047711 NM_004841 AK290308	-264547	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-511540	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	119192	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	264965	-	TSC_hg19_v1_chr1_+_178995028 AB007944	419839	+	AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##BC110611|RASAL2|9462|RAS protein activator like 2##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##AB007944|FAM20B|9917|family with sequence similarity 20, member B	0.0	
chr14	69262764	69262912	reg1022496.p1	4.020	+	NM_001244698 NM_004926	-2208	-	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	-3118	-	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-976318	+	NM_001244701 AB528867	146	-	TSC_hg19_v1_chr14_-_69354901 BX641076	92101	-	BX248020 AK299362 TSC_hg19_v1_chr14_-_69444987	182148	-	NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BX641076|ACTN1|87|actinin, alpha 1##BX248020|ACTN1|87|actinin, alpha 1##AK299362|ACTN1|87|actinin, alpha 1	0.0	
chr15	38746296	38746372	reg1029044.p1	4.020	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	-201312	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	-201939	+	BC029221 NM_152453	-518878	+	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	11	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	110597	-	AK093014 AX747856 BC119016 BC119810 NM_207444	242464	+	NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53	0.0	
chr16	1156410	1156532	reg1036635.p2	4.020	+	AY358832 NM_207419	-10228	-	AK308381 NM_001053 AB528240 DQ448303 DQ448304	-27647	+	NM_001172560	-33716	+	AF073931 NM_001005407 NM_021098 TSC_hg19_v1_chr16_+_1203331 AF051946	46855	+	AJ420779 TSC_hg19_v1_chr16_+_1203772	47284	+	NM_012467 TSC_hg19_v1_chr16_-_1275269	118790	-	AY358832|C1QTNF8|390664|C1q and tumor necrosis factor related protein 8##NM_207419|C1QTNF8|390664|C1q and tumor necrosis factor related protein 8##AK308381|SSTR5|6755|somatostatin receptor 5##NM_001053|SSTR5|6755|somatostatin receptor 5##DQ448303|SSTR5|6755|somatostatin receptor 5##DQ448304|SSTR5|6755|somatostatin receptor 5##NM_001172560|SSTR5|6755|somatostatin receptor 5##AF073931|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit##NM_001005407|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit##NM_021098|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit##AF051946|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit##AJ420779|CACNA1H|8912|calcium channel, voltage-dependent, T type, alpha 1H subunit##NM_012467|TPSG1|25823|tryptase gamma 1	0.592794	CTCF.p2:16:0.408
chr18	46131986	46132107	reg1035246.p1	4.020	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-66273	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-196337	-	AM988836 AK296709 NM_001039360 EF120357	-468347	-	AK131394 NM_001190823	337101	-	AK301535 NM_001190822	343656	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	344721	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.0	
chrX	125132547	125132658	reg1034925.p2	4.020	+	NM_001195272	-678634	+	HE578281 BC140783 BC144542 BC144543 AF100772 NM_001163278 NM_001163279 NM_014253	-1034969	-	NM_001114937 NM_002351 AL023657 AK311645	-1652427	+	BC136673 BC136674 NM_001013628	167477	-	TSC_hg19_v1_chrX_-_125686794 BC035674 NM_178470	554214	-	NM_001122716	821144	+	NM_001195272|LOC100129520|100129520|testis expressed sequence 13-like##BC140783|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144542|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144543|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##AF100772|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163278|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163279|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_014253|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001114937|SH2D1A|4068|SH2 domain containing 1A##NM_002351|SH2D1A|4068|SH2 domain containing 1A##AL023657|SH2D1A|4068|SH2 domain containing 1A##AK311645|SH2D1A|4068|SH2 domain containing 1A##BC136673|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##BC136674|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##NM_001013628|DCAF12L2|340578|DDB1 and CUL4 associated factor 12-like 2##BC035674|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##NM_178470|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##NM_001122716|CXorf64|100130613|chromosome X open reading frame 64	0.946012	CTCF.p2:-11:0.925
chr11	77122920	77123099	reg1034365.p1	4.019	+	TSC_hg19_v1_chr11_-_77122998 AK296006 AK055228	-10	-	AY313782 AY326450 NM_182833	-124547	-	TSC_hg19_v1_chr11_+_76883833 BC023212	-239161	+	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	61823	-	BC040443 NM_173039 TSC_hg19_v1_chr11_+_77300718 AB028147	177691	+	AB590787 AF026003 BT019907 AF005422 BC119634 BC119635 TSC_hg19_v1_chr11_-_77348840 U53454 AK315259 X91788 NM_001293	225805	-	AK296006|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK055228|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##BC023212|MYO7A|4647|myosin VIIA##U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC040443|AQP11|282679|aquaporin 11##NM_173039|AQP11|282679|aquaporin 11##AB028147|AQP11|282679|aquaporin 11##AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A	0.0	
chr13	42954607	42954730	reg1034189.p2	4.019	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	-108383	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	-242458	+	NM_152910 NM_178009 AB078967 AB078968	-331803	+	BC040889 NM_033012	182203	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	193666	+	NM_182508 AK310859 AK098238 BC093659 BC112237	401056	+	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30	0.0	
chr16	28505514	28505694	reg1031324.p2	4.019	+	NM_001042432	-1982	-	AF077956 AF077957 AF077958 AF077959 AF077960 AF077961 AF077962 AF077963 AF077964 AF077965 AF077966 AF077967 AF077968 AF077969 AF077970 AF077971 AF077972 AF077973 AF078169 AF015596 AF078168 AF015593 AF015602 AF015599 AF015597 AF015594 AF015595 AF015598 AF015601 AF015600 U32680 TSC_hg19_v1_chr16_-_28503318 AK294070 BC111068 AK297690 AK295500 AK302027 BC002394 BC004433 AK302138 AK294250 AK313002 NM_000086	-2364	-	BC157842 AK292155 NM_001199142	-67886	-	TSC_hg19_v1_chr16_+_28505969 NM_018690 AF141332 AF141334 BC119786 BC119788	358	+	AY099296 CU687548 BC062422 NM_145659	12538	-	AB463938 BT006896 CR542144 TSC_hg19_v1_chr16_-_28550296 BC002434 AK312135 AF135266	44668	-	NM_001042432|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077956|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077957|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077958|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077959|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077960|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077961|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077962|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077963|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077964|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077965|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077966|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077967|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077968|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077969|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077970|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077971|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077972|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF077973|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF078169|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015596|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF078168|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015593|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015602|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015599|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015597|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015594|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015595|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015598|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015601|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AF015600|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##U32680|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK294070|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##BC111068|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK297690|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK295500|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK302027|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##BC002394|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##BC004433|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK302138|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK294250|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##AK313002|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##NM_000086|CLN3|1201|ceroid-lipofuscinosis, neuronal 3##BC157842|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##AK292155|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_001199142|EIF3C|8663|eukaryotic translation initiation factor 3, subunit C##NM_018690|APOBR|55911|apolipoprotein B receptor##AF141332|APOBR|55911|apolipoprotein B receptor##AF141334|APOBR|55911|apolipoprotein B receptor##BC119786|APOBR|55911|apolipoprotein B receptor##BC119788|APOBR|55911|apolipoprotein B receptor##AY099296|IL27|246778|interleukin 27##BC062422|IL27|246778|interleukin 27##NM_145659|IL27|246778|interleukin 27##BT006896|NUPR1|26471|nuclear protein, transcriptional regulator, 1##CR542144|NUPR1|26471|nuclear protein, transcriptional regulator, 1##BC002434|NUPR1|26471|nuclear protein, transcriptional regulator, 1##AK312135|NUPR1|26471|nuclear protein, transcriptional regulator, 1##AF135266|NUPR1|26471|nuclear protein, transcriptional regulator, 1	0.0	
chr3	65736934	65737033	reg1033466.p1	4.019	+	TSC_hg19_v1_chr3_-_64673677 BC036770 AK310571	-1063297	-	TSC_hg19_v1_chr3_-_64673334 AF261918 BC130578 BC171764 AF488803 NM_182920	-1063636	-	AB037733 TSC_hg19_v1_chr3_-_64672299	-1064688	-	BC062367 NM_001033057 NM_004742 NM_015520 TSC_hg19_v1_chr3_-_66024518	287530	-	AK092495 AX747571 NM_173471	382301	+	NM_001164796	534184	+	BC036770|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AK310571|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##NM_001164796|SLC25A26|115286|solute carrier family 25, member 26	0.998333	CTCF.p2:-11:0.998
chr5	76926090	76926194	reg1026693.p1	4.019	+	TSC_hg19_v1_chr5_-_76788333 AK001766 BC001807 NM_018268	-137827	-	AK296423 AK300058 TSC_hg19_v1_chr5_-_76788142 AK021855	-137997	-	TSC_hg19_v1_chr5_-_76788048 AK293316 AK295249 CU691838 AK304329 AK023977 AF115511 BC040241	-138076	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	8287	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	8372	-	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	145990	-	AK001766|WDR41|55255|WD repeat domain 41##BC001807|WDR41|55255|WD repeat domain 41##NM_018268|WDR41|55255|WD repeat domain 41##AK296423|WDR41|55255|WD repeat domain 41##AK300058|WDR41|55255|WD repeat domain 41##AK021855|WDR41|55255|WD repeat domain 41##AK293316|WDR41|55255|WD repeat domain 41##AK295249|WDR41|55255|WD repeat domain 41##AK304329|WDR41|55255|WD repeat domain 41##AK023977|WDR41|55255|WD repeat domain 41##AF115511|WDR41|55255|WD repeat domain 41##BC040241|WDR41|55255|WD repeat domain 41##EU446696|OTP|23440|orthopedia homeobox##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A	0.0	
chr6	39498061	39498241	reg1029918.p1	4.019	+	AF358909 AY253145 AY253146 AY253147 BC111860 NM_001135105 NM_001135106 NM_001135107 NM_032115 EU978943	-207812	-	AF358910 CU693040 DQ891712 DQ894889 EU978944 BC025726 AY358853 AF339912 AK310582 AK315273 NM_031460 NM_001135111	-215986	-	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	-300911	-	BC117307 BC143444 BC143445 AK131471 NM_145027	194994	-	TSC_hg19_v1_chr6_+_39760140 AK091749 AX747160	261988	+	TSC_hg19_v1_chr6_+_39760151 AK310941 AB002379 NM_001201427 BC047575	262011	+	AF358909|KCNK16|83795|potassium channel, subfamily K, member 16##AY253145|KCNK16|83795|potassium channel, subfamily K, member 16##AY253146|KCNK16|83795|potassium channel, subfamily K, member 16##AY253147|KCNK16|83795|potassium channel, subfamily K, member 16##BC111860|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135105|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135106|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135107|KCNK16|83795|potassium channel, subfamily K, member 16##NM_032115|KCNK16|83795|potassium channel, subfamily K, member 16##EU978943|KCNK16|83795|potassium channel, subfamily K, member 16##AF358910|KCNK17|89822|potassium channel, subfamily K, member 17##DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17##DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17##EU978944|KCNK17|89822|potassium channel, subfamily K, member 17##BC025726|KCNK17|89822|potassium channel, subfamily K, member 17##AY358853|KCNK17|89822|potassium channel, subfamily K, member 17##AF339912|KCNK17|89822|potassium channel, subfamily K, member 17##AK310582|KCNK17|89822|potassium channel, subfamily K, member 17##AK315273|KCNK17|89822|potassium channel, subfamily K, member 17##NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17##NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17##AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5##BC117307|KIF6|221458|kinesin family member 6##BC143444|KIF6|221458|kinesin family member 6##BC143445|KIF6|221458|kinesin family member 6##AK131471|KIF6|221458|kinesin family member 6##NM_145027|KIF6|221458|kinesin family member 6##AK310941|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AB002379|DAAM2|23500|dishevelled associated activator of morphogenesis 2##NM_001201427|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC047575|DAAM2|23500|dishevelled associated activator of morphogenesis 2	0.0	
chr6	41889033	41889214	reg1026288.p2	4.019	+	BC062627 TSC_hg19_v1_chr6_+_41888994	-130	+	BC050645 NM_004053 TSC_hg19_v1_chr6_+_41888966 AK095253	-149	+	TSC_hg19_v1_chr6_-_41888858 BC019866 AK300573 AK307070 BC012618 NM_004275	-249	-	TSC_hg19_v1_chr6_+_41889209 AK314147 BC007340	86	+	TSC_hg19_v1_chr6_+_41889236 CU690756	144	+	AB385206 CR542246 DQ891748 DQ895130 BC011616 M90814 TSC_hg19_v1_chr6_-_41909544 AK315421 AK299187 M92287 NM_001136125 NM_001760	20376	-	BC062627|BYSL|705|bystin-like##BC050645|BYSL|705|bystin-like##NM_004053|BYSL|705|bystin-like##BC019866|MED20|9477|mediator complex subunit 20##AK300573|MED20|9477|mediator complex subunit 20##AK307070|MED20|9477|mediator complex subunit 20##BC012618|MED20|9477|mediator complex subunit 20##NM_004275|MED20|9477|mediator complex subunit 20##AK314147|BYSL|705|bystin-like##BC007340|BYSL|705|bystin-like##CR542246|CCND3|896|cyclin D3##DQ891748|CCND3|896|cyclin D3##DQ895130|CCND3|896|cyclin D3##BC011616|CCND3|896|cyclin D3##M90814|CCND3|896|cyclin D3##AK315421|CCND3|896|cyclin D3##AK299187|CCND3|896|cyclin D3##M92287|CCND3|896|cyclin D3##NM_001136125|CCND3|896|cyclin D3##NM_001760|CCND3|896|cyclin D3	0.01755	
chr6	8539841	8539929	reg1033184.p2	4.019	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-103997	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-104177	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-437095	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	1872731	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	1875390	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	1875583	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.952819	CTCF.p2:-14:0.953
chr6_mann_hap4	1857450	1857549	reg1031557.p1	4.019	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.95208	CTCF.p2:-17:0.952
chr7	35765079	35765190	reg1017779.p2	4.019	+	TSC_hg19_v1_chr7_-_35734795 NM_022373	-30356	-	BC020264 TSC_hg19_v1_chr7_-_35734751 AK055708	-30395	-	TSC_hg19_v1_chr7_-_35734533 BC005091	-30538	-	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	75576	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	75699	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	75718	+	NM_022373|HERPUD2|64224|HERPUD family member 2##BC020264|HERPUD2|64224|HERPUD family member 2##AK055708|HERPUD2|64224|HERPUD family member 2##BC005091|HERPUD2|64224|HERPUD family member 2##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7	0.0	
chr10	91413205	91413298	reg1027802.p1	4.018	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-7927	-	TSC_hg19_v1_chr10_-_91404973 AK125428	-8308	-	AF355198 AY027662 AY027663 NM_138316 NM_148978	-9613	-	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	48124	+	TSC_hg19_v1_chr10_+_91498725 AK025628	85516	+	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	1204195	-	AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AK125428|PANK1|53354|pantothenate kinase 1##AF355198|PANK1|53354|pantothenate kinase 1##AY027662|PANK1|53354|pantothenate kinase 1##AY027663|PANK1|53354|pantothenate kinase 1##NM_138316|PANK1|53354|pantothenate kinase 1##NM_148978|PANK1|53354|pantothenate kinase 1##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AK025628|KIF20B|9585|kinesin family member 20B##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)	0.0	
chr14	75165031	75165098	reg1042985.p1	4.018	+	TSC_hg19_v1_chr14_-_75078940 BC078659 Z37976 NM_000428 S82451	-86205	-	TSC_hg19_v1_chr14_+_74960467 AK290728 NM_194279 BC015771 BX248252 BC032893	-204606	+	TSC_hg19_v1_chr14_-_74960037 AK311931 BC002532 NM_006432	-205005	-	TSC_hg19_v1_chr14_-_75179784 AB002315 AK304217 AK296912 BX248747 BC032944 NM_001039479	14712	-	TSC_hg19_v1_chr14_+_75179883 NM_015962 AK290666 BC022361 AK021636 BC080600 BX248271	14811	+	TSC_hg19_v1_chr14_+_75230066 AK095760 NM_019589	64968	+	BC078659|LTBP2|4053|latent transforming growth factor beta binding protein 2##Z37976|LTBP2|4053|latent transforming growth factor beta binding protein 2##NM_000428|LTBP2|4053|latent transforming growth factor beta binding protein 2##S82451|LTBP2|4053|latent transforming growth factor beta binding protein 2##AK290728|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##NM_194279|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##BC015771|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##BX248252|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##BC032893|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##AK311931|NPC2|10577|Niemann-Pick disease, type C2##BC002532|NPC2|10577|Niemann-Pick disease, type C2##NM_006432|NPC2|10577|Niemann-Pick disease, type C2##AB002315|KIAA0317|9870|KIAA0317##AK304217|KIAA0317|9870|KIAA0317##AK296912|KIAA0317|9870|KIAA0317##BX248747|KIAA0317|9870|KIAA0317##BC032944|KIAA0317|9870|KIAA0317##NM_001039479|KIAA0317|9870|KIAA0317##NM_015962|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK290666|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC022361|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK021636|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC080600|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BX248271|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK095760|YLPM1|56252|YLP motif containing 1##NM_019589|YLPM1|56252|YLP motif containing 1	0.0	
chr15	72963319	72963416	reg1006936.p2	4.018	+	NM_018652	-16330	+	TSC_hg19_v1_chr15_+_72766706 AB209432 BC051877	-196651	+	TSC_hg19_v1_chr15_+_72766670 AJ243190 NM_005744 AK312715	-196700	+	NM_001252678 NM_033028 TSC_hg19_v1_chr15_+_72978547 AK303706 AF359281 AK298922 AK314507 BX647855 BC027624 AK075321 AK302224 AB528022 DQ891519 DQ894709	15176	+	BC037410 TSC_hg19_v1_chr15_-_73051778	88347	-	TSC_hg19_v1_chr15_-_73076054 CU675251 EU831454 EU831541 BC018074	112673	-	NM_018652|GOLGA6B|55889|golgin A6 family, member B##AB209432|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##BC051877|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##AJ243190|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##NM_005744|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##AK312715|ARIH1|25820|ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)##NM_001252678|BBS4|585|Bardet-Biedl syndrome 4##NM_033028|BBS4|585|Bardet-Biedl syndrome 4##AK303706|BBS4|585|Bardet-Biedl syndrome 4##AF359281|BBS4|585|Bardet-Biedl syndrome 4##AK298922|BBS4|585|Bardet-Biedl syndrome 4##AK314507|BBS4|585|Bardet-Biedl syndrome 4##BX647855|BBS4|585|Bardet-Biedl syndrome 4##BC027624|BBS4|585|Bardet-Biedl syndrome 4##AK075321|BBS4|585|Bardet-Biedl syndrome 4##AK302224|BBS4|585|Bardet-Biedl syndrome 4##DQ891519|BBS4|585|Bardet-Biedl syndrome 4##DQ894709|BBS4|585|Bardet-Biedl syndrome 4##EU831454|ADPGK|83440|ADP-dependent glucokinase##EU831541|ADPGK|83440|ADP-dependent glucokinase##BC018074|ADPGK|83440|ADP-dependent glucokinase	0.18858	
chr16	57411100	57411193	reg1031620.p1	4.018	+	TSC_hg19_v1_chr16_+_57406401 AK223351 AK313806 U84487 U91835 BC001163 BC016164 NM_002996 AB590256 DQ890704 DQ891871 DQ893888 DQ895059 CU674588 CR457426	-4707	+	AK222692 TSC_hg19_v1_chr16_+_57406382	-4761	+	NM_002990 AK311970 U83171 U83239 BC027952 CU693342 AB590299 DQ890922 DQ893311 DQ894072 DQ896625 EU176526	-18436	+	BC069107 NM_002987 BC112066 BC112068	27549	+	BC036316 TSC_hg19_v1_chr16_-_57481298 AK074263 BC002568 AK292281 AL136613 BC071740 BC024196 AF248964 NM_020313 BC067303	70208	-	AK075438 NM_020312 TSC_hg19_v1_chr16_+_57481390 AK295793 BC064946 AK293585 BC029341 BC054340 AF161444 AK290627 AK303527 CU687976 EU832506 EU832587	70230	+	AK223351|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK313806|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U84487|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U91835|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC001163|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC016164|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002996|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ890704|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ891871|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ893888|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ895059|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##CR457426|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK222692|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002990|CCL22|6367|chemokine (C-C motif) ligand 22##AK311970|CCL22|6367|chemokine (C-C motif) ligand 22##U83171|CCL22|6367|chemokine (C-C motif) ligand 22##U83239|CCL22|6367|chemokine (C-C motif) ligand 22##BC027952|CCL22|6367|chemokine (C-C motif) ligand 22##DQ890922|CCL22|6367|chemokine (C-C motif) ligand 22##DQ893311|CCL22|6367|chemokine (C-C motif) ligand 22##DQ894072|CCL22|6367|chemokine (C-C motif) ligand 22##DQ896625|CCL22|6367|chemokine (C-C motif) ligand 22##EU176526|CCL22|6367|chemokine (C-C motif) ligand 22##BC069107|CCL17|6361|chemokine (C-C motif) ligand 17##NM_002987|CCL17|6361|chemokine (C-C motif) ligand 17##BC112066|CCL17|6361|chemokine (C-C motif) ligand 17##BC112068|CCL17|6361|chemokine (C-C motif) ligand 17##AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK075438|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_020312|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK295793|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC064946|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK293585|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC029341|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC054340|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AF161444|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK290627|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK303527|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832506|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832587|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)	0.0	
chr17	75888537	75888679	reg1032734.p1	4.018	+	TSC_hg19_v1_chr17_+_75543021 AK096234	-345588	+	AK056495 NM_001113495	-417284	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-441219	+	BC039479 NM_001142640 NM_018996	111674	+	TSC_hg19_v1_chr17_-_76124768 AK074065	236164	-	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	236230	-	AK096234|LOC100507351|100507351|uncharacterized LOC100507351##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK074065|TMC6|11322|transmembrane channel-like 6##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6	0.0	
chr3	47262283	47262378	reg1036526.p1	4.018	+	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	-56891	-	TSC_hg19_v1_chr3_-_47098906 AK026837	-163387	-	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	-232860	+	BC015311 NM_001134878 NM_022342 NM_182902	61965	-	NM_025010 TSC_hg19_v1_chr3_+_47324433 AK023765 AK291477 AK295292 BX537953 BC015962 AB527175 AM393269 AM393767 BC032620	62098	+	AB040904 NM_015466 TSC_hg19_v1_chr3_+_47422510 AK055157 AK299906 AK295888 AK289502 AB025194 AF290614 AK295877 BC089042	160202	+	AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2##AK026837|SETD2|29072|SET domain containing 2##AK092871|NBEAL2|23218|neurobeachin-like 2##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9##NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)##AK023765|KLHL18|23276|kelch-like 18 (Drosophila)##AK291477|KLHL18|23276|kelch-like 18 (Drosophila)##AK295292|KLHL18|23276|kelch-like 18 (Drosophila)##BX537953|KLHL18|23276|kelch-like 18 (Drosophila)##BC015962|KLHL18|23276|kelch-like 18 (Drosophila)##AM393269|KLHL18|23276|kelch-like 18 (Drosophila)##AM393767|KLHL18|23276|kelch-like 18 (Drosophila)##BC032620|KLHL18|23276|kelch-like 18 (Drosophila)##AB040904|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_015466|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK055157|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK299906|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295888|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK289502|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AB025194|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AF290614|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295877|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##BC089042|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23	0.804667	CTCF.p2:43:0.805
chr7	149698420	149698533	reg1032088.p1	4.018	+	TSC_hg19_v1_chr7_+_149571066 BX640846 AK290086 AK094602 AK098362 AK172725 DQ995344 AY037164	-127395	+	BC023225 TSC_hg19_v1_chr7_-_149570892 BC028735	-127581	-	TSC_hg19_v1_chr7_+_149570049 AF452639 AK057700 NM_001100592 NM_145230	-128434	+	AB039791 NM_001164459	301592	-	TSC_hg19_v1_chr7_+_150020443 NM_001142928 NM_023942 AK055954	321928	+	TSC_hg19_v1_chr7_+_150020552 BC001354	322100	+	BX640846|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK290086|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK094602|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK098362|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK172725|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##DQ995344|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AY037164|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##BC023225|LOC401431|401431|uncharacterized LOC401431##BC028735|LOC401431|401431|uncharacterized LOC401431##AF452639|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AK057700|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_001100592|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##NM_145230|ATP6V0E2|155066|ATPase, H+ transporting V0 subunit e2##AB039791|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)##NM_001164459|ACTR3C|653857|ARP3 actin-related protein 3 homolog C (yeast)##NM_001142928|LRRC61|65999|leucine rich repeat containing 61##NM_023942|LRRC61|65999|leucine rich repeat containing 61##AK055954|LRRC61|65999|leucine rich repeat containing 61##BC001354|LRRC61|65999|leucine rich repeat containing 61	0.848435	CTCF.p2:-10:0.848
chr7	93512540	93512639	reg1035016.p2	4.018	+	AB022177 AK313996 NM_001164737 NM_001742	-308551	-	AB022178 NM_001164738	-323468	-	BC017888 NM_017667 NM_024553 TSC_hg19_v1_chr7_+_92861678 AK126478 AL833112 AK055965 AK299582 AB100163 BC108708 BC132740 BC132742 AB058764 BC152424 CU676100 AB385511	-650863	+	CU675117 DQ892533 DQ895744 L27624 AY691946 D29992 AK075427 AK024817 AK075425 AK092499 AK129833 AK313260 BC005330 NM_006528 TSC_hg19_v1_chr7_-_93520066	7440	-	BC029367 NM_021955	23230	+	NM_004126 BC009709	38467	+	AB022177|CALCR|799|calcitonin receptor##AK313996|CALCR|799|calcitonin receptor##NM_001164737|CALCR|799|calcitonin receptor##NM_001742|CALCR|799|calcitonin receptor##AB022178|CALCR|799|calcitonin receptor##NM_001164738|CALCR|799|calcitonin receptor##BC017888|CCDC132|55610|coiled-coil domain containing 132##NM_017667|CCDC132|55610|coiled-coil domain containing 132##NM_024553|CCDC132|55610|coiled-coil domain containing 132##AK126478|CCDC132|55610|coiled-coil domain containing 132##AL833112|CCDC132|55610|coiled-coil domain containing 132##AK055965|CCDC132|55610|coiled-coil domain containing 132##AK299582|CCDC132|55610|coiled-coil domain containing 132##AB100163|CCDC132|55610|coiled-coil domain containing 132##BC108708|CCDC132|55610|coiled-coil domain containing 132##BC132740|CCDC132|55610|coiled-coil domain containing 132##BC132742|CCDC132|55610|coiled-coil domain containing 132##AB058764|CCDC132|55610|coiled-coil domain containing 132##BC152424|CCDC132|55610|coiled-coil domain containing 132##DQ892533|TFPI2|7980|tissue factor pathway inhibitor 2##DQ895744|TFPI2|7980|tissue factor pathway inhibitor 2##L27624|TFPI2|7980|tissue factor pathway inhibitor 2##AY691946|TFPI2|7980|tissue factor pathway inhibitor 2##D29992|TFPI2|7980|tissue factor pathway inhibitor 2##AK075427|TFPI2|7980|tissue factor pathway inhibitor 2##AK024817|TFPI2|7980|tissue factor pathway inhibitor 2##AK075425|TFPI2|7980|tissue factor pathway inhibitor 2##AK092499|TFPI2|7980|tissue factor pathway inhibitor 2##AK129833|TFPI2|7980|tissue factor pathway inhibitor 2##AK313260|TFPI2|7980|tissue factor pathway inhibitor 2##BC005330|TFPI2|7980|tissue factor pathway inhibitor 2##NM_006528|TFPI2|7980|tissue factor pathway inhibitor 2##BC029367|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_021955|GNGT1|2792|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1##NM_004126|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11##BC009709|GNG11|2791|guanine nucleotide binding protein (G protein), gamma 11	0.072244	
chr11	32407668	32407761	reg1034766.p1	4.017	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	-295015	+	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	-295237	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-568236	-	AK093168 BC032861 NM_001198551 NM_001198552	44646	-	TSC_hg19_v1_chr11_-_32456950 BC046461	49225	-	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	49355	-	BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1##BC046461|WT1|7490|Wilms tumor 1##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1	0.401829	CTCF.p2:-7:0.402
chr16	48559179	48559291	reg1036077.p2	4.017	+	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	-139983	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	-159444	-	BC042550 TSC_hg19_v1_chr16_-_48399765	-159475	-	BC051897 TSC_hg19_v1_chr16_-_48644092 AB014515 BC152472 NM_153029	84881	-	AB527638 TSC_hg19_v1_chr16_-_49315397	756158	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	756265	-	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC042550|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC051897|N4BP1|9683|NEDD4 binding protein 1##AB014515|N4BP1|9683|NEDD4 binding protein 1##BC152472|N4BP1|9683|NEDD4 binding protein 1##NM_153029|N4BP1|9683|NEDD4 binding protein 1##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor	0.088159	
chr17	65575372	65575552	reg1031590.p2	4.017	+	BC007905 NM_012417 NM_181671	-201539	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-201874	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-202053	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	138588	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	246240	+	AK293224 TSC_hg19_v1_chr17_+_65822221	246755	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.0	
chr20	328352	328452	reg1030521.p1	4.017	+	TSC_hg19_v1_chr20_+_327754 AK026982	-653	+	TSC_hg19_v1_chr20_+_327371 NM_024958 AK290527	-997	+	TSC_hg19_v1_chr20_+_306226 BC067361 NM_006943 U35612 BC028103	-22166	+	AY247738 NM_021158 TSC_hg19_v1_chr20_+_361483 AJ697936 AK026945 AK222837 BC027484	33011	+	TSC_hg19_v1_chr20_+_361708 BC019363	33306	+	AJ697940 TSC_hg19_v1_chr20_+_361938 AK297546 AJ697937 AJ697938 AJ697939	33560	+	AK026982|NRSN2|80023|neurensin 2##NM_024958|NRSN2|80023|neurensin 2##AK290527|NRSN2|80023|neurensin 2##BC067361|SOX12|6666|SRY (sex determining region Y)-box 12##NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12##U35612|SOX12|6666|SRY (sex determining region Y)-box 12##BC028103|SOX12|6666|SRY (sex determining region Y)-box 12##AY247738|TRIB3|57761|tribbles homolog 3 (Drosophila)##NM_021158|TRIB3|57761|tribbles homolog 3 (Drosophila)##AJ697936|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK026945|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK222837|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC027484|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC019363|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK297546|TRIB3|57761|tribbles homolog 3 (Drosophila)	0.0	
chr2	125982528	125982644	reg1033347.p1	4.017	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-1199722	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-3469349	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-3488121	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	1431121	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	1431206	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	1882155	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.943956	CTCF.p2:20:0.929
chr2	136814629	136814782	reg1031357.p1	4.017	+	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-71489	-	TSC_hg19_v1_chr2_-_136743143 AK222476 BC000629 AK290607 J05032	-71576	-	BT006710 CU674308 DQ890741 DQ893912 TSC_hg19_v1_chr2_-_136743053 CR749809 BC107749 AY762100	-71650	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	59093	-	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	60971	-	TSC_hg19_v1_chr2_+_137523114 AK299929	708411	+	AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK222476|DARS|1615|aspartyl-tRNA synthetase##BC000629|DARS|1615|aspartyl-tRNA synthetase##AK290607|DARS|1615|aspartyl-tRNA synthetase##J05032|DARS|1615|aspartyl-tRNA synthetase##BT006710|DARS|1615|aspartyl-tRNA synthetase##DQ890741|DARS|1615|aspartyl-tRNA synthetase##DQ893912|DARS|1615|aspartyl-tRNA synthetase##CR749809|DARS|1615|aspartyl-tRNA synthetase##BC107749|DARS|1615|aspartyl-tRNA synthetase##AY762100|DARS|1615|aspartyl-tRNA synthetase##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B	0.0	
chr22	39867837	39867927	reg1032810.p1	4.017	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	-14346	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	-14562	+	TSC_hg19_v1_chr22_+_39795812 AK291668 AK316004 AK308903 AB591024 CU690722	-72071	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	15408	+	TSC_hg19_v1_chr22_+_39898257 NM_019008	30383	+	TSC_hg19_v1_chr22_+_39898332 AL834205	30428	+	BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK291668|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK316004|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK308903|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_019008|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL834205|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like	0.0	
chr4	168911129	168911243	reg1029282.p1	4.017	+	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	-755446	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	-755482	-	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	-755575	-	NM_007193 BC007320 AF196478 AJ238979 CU675613 EU176730	102583	+	TSC_hg19_v1_chr4_-_169239951 AK001649 BC038115 AK307404 NM_017631	328719	-	TSC_hg19_v1_chr4_-_169401573 AK096369	490394	-	AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_007193|ANXA10|11199|annexin A10##BC007320|ANXA10|11199|annexin A10##AF196478|ANXA10|11199|annexin A10##AJ238979|ANXA10|11199|annexin A10##EU176730|ANXA10|11199|annexin A10##AK001649|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##BC038115|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##AK307404|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##NM_017631|DDX60|55601|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60##AK096369|DDX60L|91351|DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like	0.278859	CTCF.p2:-46:0.279
chr4	5746462	5746573	reg1031196.p2	4.017	+	TSC_hg19_v1_chr4_+_5712929 AF216184 AF216185 NM_153717 BC085608 AF239742	-33520	+	AY152402 AY152403 NM_001166136	-35243	-	AY185210 NM_147127 TSC_hg19_v1_chr4_-_5710299	-36217	-	AK091696 TSC_hg19_v1_chr4_-_5828628	82091	-	BT006806 CU674102 DQ892528 DQ895740 TSC_hg19_v1_chr4_-_5889997	143479	-	D78012 TSC_hg19_v1_chr4_-_5890210 AK127754 BC000252 BC007613 AK309379	143672	-	AF216184|EVC|2121|Ellis van Creveld syndrome##AF216185|EVC|2121|Ellis van Creveld syndrome##NM_153717|EVC|2121|Ellis van Creveld syndrome##BC085608|EVC|2121|Ellis van Creveld syndrome##AF239742|EVC|2121|Ellis van Creveld syndrome##AY152402|EVC2|132884|Ellis van Creveld syndrome 2##AY152403|EVC2|132884|Ellis van Creveld syndrome 2##NM_001166136|EVC2|132884|Ellis van Creveld syndrome 2##AY185210|EVC2|132884|Ellis van Creveld syndrome 2##NM_147127|EVC2|132884|Ellis van Creveld syndrome 2##AK091696|CRMP1|1400|collapsin response mediator protein 1##BT006806|CRMP1|1400|collapsin response mediator protein 1##DQ892528|CRMP1|1400|collapsin response mediator protein 1##DQ895740|CRMP1|1400|collapsin response mediator protein 1##D78012|CRMP1|1400|collapsin response mediator protein 1##AK127754|CRMP1|1400|collapsin response mediator protein 1##BC000252|CRMP1|1400|collapsin response mediator protein 1##BC007613|CRMP1|1400|collapsin response mediator protein 1##AK309379|CRMP1|1400|collapsin response mediator protein 1	0.0	
chr5	142597427	142597607	reg1031213.p1	4.017	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-447209	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-447545	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-519946	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	185306	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	185589	-	BC015610 TSC_hg19_v1_chr5_-_142783214	185694	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr1	204589088	204589193	reg1034836.p1	4.016	+	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	-103530	+	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	-103638	+	TSC_hg19_v1_chr1_-_204463934 BC094741	-125375	-	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	65451	-	TSC_hg19_v1_chr1_+_204797779 BC040674 NM_001005388 NM_001005389 NM_001160332 NM_001160333 NM_015090 AK295291 AK299262 AK090639 AX746553	208672	+	TSC_hg19_v1_chr1_+_204839989 AK308686	250843	+	AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2##BC040674|NFASC|23114|neurofascin##NM_001005388|NFASC|23114|neurofascin##NM_001005389|NFASC|23114|neurofascin##NM_001160332|NFASC|23114|neurofascin##NM_001160333|NFASC|23114|neurofascin##NM_015090|NFASC|23114|neurofascin##AK295291|NFASC|23114|neurofascin##AK299262|NFASC|23114|neurofascin##AK090639|NFASC|23114|neurofascin##AK308686|NFASC|23114|neurofascin	0.016391	
chr1	233735007	233735126	reg1033983.p1	4.016	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	-271483	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	-303583	-	TSC_hg19_v1_chr1_+_233086381 AF416713	-648677	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	14757	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	14853	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	305546	+	AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3	0.0	
chr16	12498979	12499075	reg1032086.p1	4.016	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-428454	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-439943	+	NM_001130007	-488509	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	398624	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	398692	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	496441	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr17	42275872	42276006	reg1034179.p2	4.016	+	BC037418 HQ258188 TSC_hg19_v1_chr17_-_42275499 BC113595 BC126113 NM_001098833 NM_020218	-463	-	TSC_hg19_v1_chr17_+_42264588 AF370373	-11322	+	AL833899 NM_177441 TSC_hg19_v1_chr17_+_42264581	-11362	+	TSC_hg19_v1_chr17_-_42277350 AK296689	1446	-	AK291733 TSC_hg19_v1_chr17_-_42296871	20939	-	X56687 TSC_hg19_v1_chr17_-_42296940	20993	-	BC037418|ATXN7L3|56970|ataxin 7-like 3##HQ258188|ATXN7L3|56970|ataxin 7-like 3##BC113595|ATXN7L3|56970|ataxin 7-like 3##BC126113|ATXN7L3|56970|ataxin 7-like 3##NM_001098833|ATXN7L3|56970|ataxin 7-like 3##NM_020218|ATXN7L3|56970|ataxin 7-like 3##AF370373|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2##AL833899|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2##NM_177441|TMUB2|79089|transmembrane and ubiquitin-like domain containing 2##AK296689|ATXN7L3|56970|ataxin 7-like 3##AK291733|UBTF|7343|upstream binding transcription factor, RNA polymerase I##X56687|UBTF|7343|upstream binding transcription factor, RNA polymerase I	0.0	
chr17	49513143	49513286	reg1033359.p1	4.016	+	AF151806 TSC_hg19_v1_chr17_+_49337913 AK314399 BC025276 BC001535	-175289	+	TSC_hg19_v1_chr17_+_49337906 NM_016001	-175315	+	TSC_hg19_v1_chr17_+_49337888 AK026355	-175328	+	TSC_hg19_v1_chr17_-_50235676 AK294652 AK313001	722474	-	TSC_hg19_v1_chr17_-_50236075 BC047456 BC068462	722826	-	CR936674 TSC_hg19_v1_chr17_-_50236127 NM_020178	722924	-	AF151806|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK314399|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC025276|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##BC001535|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##NM_016001|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK026355|UTP18|51096|UTP18 small subunit (SSU) processome component homolog (yeast)##AK294652|CA10|56934|carbonic anhydrase X##AK313001|CA10|56934|carbonic anhydrase X##BC047456|CA10|56934|carbonic anhydrase X##BC068462|CA10|56934|carbonic anhydrase X##NM_020178|CA10|56934|carbonic anhydrase X	0.0	
chr19	48625616	48625754	reg1030809.p2	4.016	+	AF058921 BC017956 AK022440 TSC_hg19_v1_chr19_-_48614075 AF065214 BC063416 AK314524 AK295400 NM_001159322 NM_001159323 NM_003706	-11625	-	HQ258076 BC126133 BC126135 AF169159 NM_019855	-78440	-	AF279147 NM_022142 BC015598	-127760	+	M36067 NM_000234 TSC_hg19_v1_chr19_-_48673602 AK314210 AK297296 AK303644 AB208791 AK225863 AK300370	47896	-	TSC_hg19_v1_chr19_+_48673949 BC043386	48268	+	CU691176 EU118120 EU118121 NM_001184900	118612	-	AF058921|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC017956|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK022440|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AF065214|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC063416|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK314524|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK295400|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159322|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159323|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_003706|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##HQ258076|CABP5|56344|calcium binding protein 5##BC126133|CABP5|56344|calcium binding protein 5##BC126135|CABP5|56344|calcium binding protein 5##AF169159|CABP5|56344|calcium binding protein 5##NM_019855|CABP5|56344|calcium binding protein 5##AF279147|ELSPBP1|64100|epididymal sperm binding protein 1##NM_022142|ELSPBP1|64100|epididymal sperm binding protein 1##BC015598|ELSPBP1|64100|epididymal sperm binding protein 1##M36067|LIG1|3978|ligase I, DNA, ATP-dependent##NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent##AK314210|LIG1|3978|ligase I, DNA, ATP-dependent##AK297296|LIG1|3978|ligase I, DNA, ATP-dependent##AK303644|LIG1|3978|ligase I, DNA, ATP-dependent##AB208791|LIG1|3978|ligase I, DNA, ATP-dependent##AK225863|LIG1|3978|ligase I, DNA, ATP-dependent##AK300370|LIG1|3978|ligase I, DNA, ATP-dependent##BC043386|C19orf68|374920|chromosome 19 open reading frame 68##EU118120|CARD8|22900|caspase recruitment domain family, member 8##EU118121|CARD8|22900|caspase recruitment domain family, member 8##NM_001184900|CARD8|22900|caspase recruitment domain family, member 8	0.0	
chr19	7402444	7402625	reg1023059.p1	4.016	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	-108574	-	TSC_hg19_v1_chr19_-_7099547 AK127494	-302983	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-332819	+	TSC_hg19_v1_chr19_+_7460030 NM_015318	57473	+	TSC_hg19_v1_chr19_+_7460061 AB011093	57543	+	AK127045 NM_001130955	102039	+	BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr2	198017181	198017338	reg1034891.p1	4.016	+	AB128038 AB527353 TSC_hg19_v1_chr2_-_197791382 BX648642 AK022439 NM_024989 BC040517	-225815	-	BC137150 BC137151 AY358249 NM_213608	-342322	-	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	-352846	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	158123	-	TSC_hg19_v1_chr2_-_198175459 BC063622	158214	-	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	158260	-	AB128038|PGAP1|80055|post-GPI attachment to proteins 1##BX648642|PGAP1|80055|post-GPI attachment to proteins 1##AK022439|PGAP1|80055|post-GPI attachment to proteins 1##NM_024989|PGAP1|80055|post-GPI attachment to proteins 1##BC040517|PGAP1|80055|post-GPI attachment to proteins 1##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK124039|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44	0.171567	
chr2	217529635	217529741	reg1015286.p2	4.016	+	TSC_hg19_v1_chr2_+_217498216 DQ893450 EU176752	-31390	+	TSC_hg19_v1_chr2_+_217498142 NM_000597 X16302 BC071967 AB209509 BC004312 BC009902 BC012769 M35410	-31552	+	NM_000998 TSC_hg19_v1_chr2_+_217363566 AK289472 BC016748 BC067789 L22154 AK023419 AK291857 BC063476 L06499 BC014262 BC082239 BC047872	-166135	+	L27560 AF147308 TSC_hg19_v1_chr2_-_217540846	11096	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	29878	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	30572	-	DQ893450|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##EU176752|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##NM_000998|RPL37A|6168|ribosomal protein L37a##AK289472|RPL37A|6168|ribosomal protein L37a##BC016748|RPL37A|6168|ribosomal protein L37a##BC067789|RPL37A|6168|ribosomal protein L37a##L22154|RPL37A|6168|ribosomal protein L37a##AK023419|RPL37A|6168|ribosomal protein L37a##AK291857|RPL37A|6168|ribosomal protein L37a##BC063476|RPL37A|6168|ribosomal protein L37a##L06499|RPL37A|6168|ribosomal protein L37a##BC014262|RPL37A|6168|ribosomal protein L37a##BC082239|RPL37A|6168|ribosomal protein L37a##BC047872|RPL37A|6168|ribosomal protein L37a##L27560|IGFBP5|3488|insulin-like growth factor binding protein 5##AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5	0.0	
chr10	6390129	6390309	reg1028450.p1	4.015	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-145343	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-203307	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-203335	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	232042	-	TSC_hg19_v1_chr10_+_6622460 AY007155	232261	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	1061031	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.0	
chr11	35140703	35140844	reg1029107.p2	4.015	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-202616	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-202884	-	NM_001135024 NM_001166158 NM_003477	-203097	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	19627	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	19961	+	TSC_hg19_v1_chr11_+_35160821 M59040	20045	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr11	61584450	61584548	reg1035545.p2	4.015	+	AK074754 AK074819 TSC_hg19_v1_chr11_-_61584464 NM_013402	-10	-	CU675827 AF199596 AF226273 DQ890643 DQ893822 AK027427 BC007846 TSC_hg19_v1_chr11_-_61584328 AK222906 AF084558 AL512760 AK314199 AK027522	-198	-	TSC_hg19_v1_chr11_+_61560405 AK312761	-24095	+	TSC_hg19_v1_chr11_+_61595676 AF084559 NM_004265	11202	+	AK074939 BC009011 TSC_hg19_v1_chr11_+_61595772 AF126799 AB529115	11317	+	AB529172 DQ892880 DQ896129 CU678796 TSC_hg19_v1_chr11_-_61659018 AF134404 AK295473 AK310523 AF084560 BC004901 NM_021727	74455	-	AK074754|FADS1|3992|fatty acid desaturase 1##AK074819|FADS1|3992|fatty acid desaturase 1##NM_013402|FADS1|3992|fatty acid desaturase 1##AF199596|FADS1|3992|fatty acid desaturase 1##AF226273|FADS1|3992|fatty acid desaturase 1##DQ890643|FADS1|3992|fatty acid desaturase 1##DQ893822|FADS1|3992|fatty acid desaturase 1##AK027427|FADS1|3992|fatty acid desaturase 1##BC007846|FADS1|3992|fatty acid desaturase 1##AK222906|FADS1|3992|fatty acid desaturase 1##AF084558|FADS1|3992|fatty acid desaturase 1##AL512760|FADS1|3992|fatty acid desaturase 1##AK314199|FADS1|3992|fatty acid desaturase 1##AK027522|FADS1|3992|fatty acid desaturase 1##AK312761|FEN1|2237|flap structure-specific endonuclease 1##AF084559|FADS2|9415|fatty acid desaturase 2##NM_004265|FADS2|9415|fatty acid desaturase 2##AK074939|FADS2|9415|fatty acid desaturase 2##BC009011|FADS2|9415|fatty acid desaturase 2##AF126799|FADS2|9415|fatty acid desaturase 2##DQ892880|FADS3|3995|fatty acid desaturase 3##DQ896129|FADS3|3995|fatty acid desaturase 3##AF134404|FADS3|3995|fatty acid desaturase 3##AK295473|FADS3|3995|fatty acid desaturase 3##AK310523|FADS3|3995|fatty acid desaturase 3##AF084560|FADS3|3995|fatty acid desaturase 3##BC004901|FADS3|3995|fatty acid desaturase 3##NM_021727|FADS3|3995|fatty acid desaturase 3	0.151143	
chr14	55240670	55240822	reg1002347.p2	4.015	+	NM_001161577 BC021726	-19219	+	TSC_hg19_v1_chr14_+_55168831 AB028976	-71857	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	-206110	+	AY137463 AY137464 AY137465 Z16418 S44049 CR536551 DQ892998 DQ896245 S43856 S44053 TSC_hg19_v1_chr14_-_55369545 Z29433 Z29434 U66095 BC025415 U19523 U66097 NM_000161 NM_001024024 NM_001024070 NM_001024071	128668	-	TSC_hg19_v1_chr14_-_55493780 BC000622 BC005040 AK293005 BC063041	253039	-	TSC_hg19_v1_chr14_-_55493818 BC043349 NM_001008396 NM_007086	253065	-	NM_001161577|SAMD4A|23034|sterile alpha motif domain containing 4A##BC021726|SAMD4A|23034|sterile alpha motif domain containing 4A##AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A##AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##AY137463|GCH1|2643|GTP cyclohydrolase 1##AY137464|GCH1|2643|GTP cyclohydrolase 1##AY137465|GCH1|2643|GTP cyclohydrolase 1##Z16418|GCH1|2643|GTP cyclohydrolase 1##S44049|GCH1|2643|GTP cyclohydrolase 1##CR536551|GCH1|2643|GTP cyclohydrolase 1##DQ892998|GCH1|2643|GTP cyclohydrolase 1##DQ896245|GCH1|2643|GTP cyclohydrolase 1##S43856|GCH1|2643|GTP cyclohydrolase 1##S44053|GCH1|2643|GTP cyclohydrolase 1##Z29433|GCH1|2643|GTP cyclohydrolase 1##Z29434|GCH1|2643|GTP cyclohydrolase 1##U66095|GCH1|2643|GTP cyclohydrolase 1##BC025415|GCH1|2643|GTP cyclohydrolase 1##U19523|GCH1|2643|GTP cyclohydrolase 1##U66097|GCH1|2643|GTP cyclohydrolase 1##NM_000161|GCH1|2643|GTP cyclohydrolase 1##NM_001024024|GCH1|2643|GTP cyclohydrolase 1##NM_001024070|GCH1|2643|GTP cyclohydrolase 1##NM_001024071|GCH1|2643|GTP cyclohydrolase 1##BC000622|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC005040|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##AK293005|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC063041|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##BC043349|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_001008396|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1##NM_007086|WDHD1|11169|WD repeat and HMG-box DNA binding protein 1	0.0	
chr14	73212755	73212879	reg1041459.p1	4.015	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-812951	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-813664	+	AK294895 NM_001204423	-814001	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	147991	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	180318	+	AK098542 AF311602 NM_178441	240840	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.764686	CTCF.p2:-7:0.765
chr19	21541823	21541890	reg1032696.p2	4.015	+	BC034499 TSC_hg19_v1_chr19_+_21541801 AK027579 AK291002 AK291193	-76	+	TSC_hg19_v1_chr19_-_21512183 AK128184 AK131527 NM_021269 AK095062 BX647526	-29663	-	BX647597 TSC_hg19_v1_chr19_+_21324836 AK308127 NM_133473 AK293072 AB075849 BC065374 BC040506	-217000	+	TSC_hg19_v1_chr19_+_21579931 NM_001076678 NM_145326 NM_175910 BX648842 AK092178 AK128494 AB209086 BC006408 BC022394 AX721142 EU446562	38105	+	CR627135 TSC_hg19_v1_chr19_-_21646716	104849	-	TSC_hg19_v1_chr19_+_21688403 AK308708 NM_001001415 AF325191 AY269786	146569	+	BC034499|ZNF738|148203|zinc finger protein 738##AK027579|ZNF738|148203|zinc finger protein 738##AK291002|ZNF738|148203|zinc finger protein 738##AK291193|ZNF738|148203|zinc finger protein 738##AK128184|ZNF708|7562|zinc finger protein 708##AK131527|ZNF708|7562|zinc finger protein 708##NM_021269|ZNF708|7562|zinc finger protein 708##BX647526|ZNF708|7562|zinc finger protein 708##BX647597|ZNF431|170959|zinc finger protein 431##AK308127|ZNF431|170959|zinc finger protein 431##NM_133473|ZNF431|170959|zinc finger protein 431##AK293072|ZNF431|170959|zinc finger protein 431##AB075849|ZNF431|170959|zinc finger protein 431##BC040506|ZNF431|170959|zinc finger protein 431##NM_001076678|ZNF493|284443|zinc finger protein 493##NM_145326|ZNF493|284443|zinc finger protein 493##NM_175910|ZNF493|284443|zinc finger protein 493##BX648842|ZNF493|284443|zinc finger protein 493##AK092178|ZNF493|284443|zinc finger protein 493##AK128494|ZNF493|284443|zinc finger protein 493##AB209086|ZNF493|284443|zinc finger protein 493##BC006408|ZNF493|284443|zinc finger protein 493##BC022394|ZNF493|284443|zinc finger protein 493##EU446562|ZNF493|284443|zinc finger protein 493##AK308708|ZNF429|353088|zinc finger protein 429##NM_001001415|ZNF429|353088|zinc finger protein 429##AF325191|ZNF429|353088|zinc finger protein 429##AY269786|ZNF429|353088|zinc finger protein 429	0.0	
chr21	45662377	45662477	reg1038552.p4	4.015	+	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	-1570	-	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	-1661	-	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-108866	+	AF194032 NM_013369 NM_175867	19671	-	BC142608 AK309572 AB006682 NM_000383 Z97990	43317	+	AB006683 AB006685 BC137268 BC137270 NM_000658	47783	+	AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##BC142608|AIRE|326|autoimmune regulator##AK309572|AIRE|326|autoimmune regulator##AB006682|AIRE|326|autoimmune regulator##NM_000383|AIRE|326|autoimmune regulator##Z97990|AIRE|326|autoimmune regulator##AB006683|AIRE|326|autoimmune regulator##AB006685|AIRE|326|autoimmune regulator##BC137268|AIRE|326|autoimmune regulator##BC137270|AIRE|326|autoimmune regulator##NM_000658|AIRE|326|autoimmune regulator	0.0	
chr2	232651478	232651599	reg1025033.p2	4.015	+	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-422	+	TSC_hg19_v1_chr2_+_232646442 AK307486	-5101	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	-5613	-	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	139495	-	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	174822	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	591845	+	AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK307486|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental	0.077762	
chr22	36755341	36755484	reg1034791.p1	4.015	+	D11393 TSC_hg19_v1_chr22_-_36697021	-58398	-	BC011915 TSC_hg19_v1_chr22_-_36681760	-73649	-	TSC_hg19_v1_chr22_+_36649178 AF305224 AK303919 AK313752 AK298053 BC113867 BC114475 BC127186 BC143038 BC143039 BC017331 AK296099	-106223	+	TSC_hg19_v1_chr22_-_36783906 AB290175 CR456526	28474	-	TSC_hg19_v1_chr22_-_36783943 M81105	28540	-	AK131080 TSC_hg19_v1_chr22_-_36783982 BC049849	28567	-	D11393|MYH9|4627|myosin, heavy chain 9, non-muscle##BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle##AF305224|APOL1|8542|apolipoprotein L, 1##AK303919|APOL1|8542|apolipoprotein L, 1##AK313752|APOL1|8542|apolipoprotein L, 1##AK298053|APOL1|8542|apolipoprotein L, 1##BC113867|APOL1|8542|apolipoprotein L, 1##BC114475|APOL1|8542|apolipoprotein L, 1##BC127186|APOL1|8542|apolipoprotein L, 1##BC143038|APOL1|8542|apolipoprotein L, 1##BC143039|APOL1|8542|apolipoprotein L, 1##BC017331|APOL1|8542|apolipoprotein L, 1##AK296099|APOL1|8542|apolipoprotein L, 1##AB290175|MYH9|4627|myosin, heavy chain 9, non-muscle##CR456526|MYH9|4627|myosin, heavy chain 9, non-muscle##M81105|MYH9|4627|myosin, heavy chain 9, non-muscle##AK131080|MYH9|4627|myosin, heavy chain 9, non-muscle##BC049849|MYH9|4627|myosin, heavy chain 9, non-muscle	0.0	
chr2	43396262	43396383	reg1029993.p1	4.015	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-376571	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-405022	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-600425	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	57023	-	TSC_hg19_v1_chr2_-_43453736 BC020369	57408	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	57420	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.0	
chr2	95424975	95425155	reg1036373.p1	4.015	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-3577062	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-5213347	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-5347311	+	AK097438 BC021716 NM_144705 AK296678 CU692394	112185	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	266417	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	362477	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.957089	CTCF.p2:9:0.445	CTCF.p2:63:0.438
chr6	157020297	157020458	reg1036004.p2	4.015	+	AF190122 NM_015718	-1243341	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1384754	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1384792	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	78686	+	TSC_hg19_v1_chr6_+_157099206 AB587572	78848	+	TSC_hg19_v1_chr6_+_157099283 AF521671	78907	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.0	
chr7	4764899	4765079	reg1036643.p2	4.015	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	-42738	+	TSC_hg19_v1_chr7_+_4721925 NM_001037165	-43151	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	-1423990	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	50272	+	TSC_hg19_v1_chr7_+_4815296 AB007875	50297	+	DQ891226 DQ894411 AF218840 BC036653 NM_020144 TSC_hg19_v1_chr7_-_4901662 AK312788	136560	-	AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##NM_001037165|FOXK1|221937|forkhead box K1##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415##AB007875|KIAA0415|9907|KIAA0415##DQ891226|PAPOLB|56903|poly(A) polymerase beta (testis specific)##DQ894411|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AF218840|PAPOLB|56903|poly(A) polymerase beta (testis specific)##BC036653|PAPOLB|56903|poly(A) polymerase beta (testis specific)##NM_020144|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AK312788|PAPOLB|56903|poly(A) polymerase beta (testis specific)	0.0	
chr7	56019458	56019622	reg1031061.p1	4.015	+	AK097282 NM_182633 AB464411	-39192	+	TSC_hg19_v1_chr7_+_55955148 BC094796 BC048108	-64371	+	AK301928 NM_207366	-89078	-	TSC_hg19_v1_chr7_+_56019577 AK026553 BC047445 AF077035 NM_015969 BC054031	41	+	TSC_hg19_v1_chr7_+_56032277 NM_001202469 NM_001483 AK097049 AK315648 BC030821 AF029786 BC000732 BC001837 AJ001259 AB528140 AM392838 BT007112 CR407612 CU674374 DQ892309 DQ895508	12877	+	TSC_hg19_v1_chr7_-_56101850 AK315235	82311	-	AK097282|ZNF713|349075|zinc finger protein 713##NM_182633|ZNF713|349075|zinc finger protein 713##BC094796|ZNF713|349075|zinc finger protein 713##AK301928|SEPT14|346288|septin 14##NM_207366|SEPT14|346288|septin 14##AK026553|MRPS17|51373|mitochondrial ribosomal protein S17##BC047445|MRPS17|51373|mitochondrial ribosomal protein S17##AF077035|MRPS17|51373|mitochondrial ribosomal protein S17##NM_015969|MRPS17|51373|mitochondrial ribosomal protein S17##BC054031|MRPS17|51373|mitochondrial ribosomal protein S17##NM_001202469|GBAS|2631|glioblastoma amplified sequence##NM_001483|GBAS|2631|glioblastoma amplified sequence##AK097049|GBAS|2631|glioblastoma amplified sequence##AK315648|GBAS|2631|glioblastoma amplified sequence##BC030821|GBAS|2631|glioblastoma amplified sequence##AF029786|GBAS|2631|glioblastoma amplified sequence##BC000732|GBAS|2631|glioblastoma amplified sequence##BC001837|GBAS|2631|glioblastoma amplified sequence##AJ001259|GBAS|2631|glioblastoma amplified sequence##AM392838|GBAS|2631|glioblastoma amplified sequence##BT007112|GBAS|2631|glioblastoma amplified sequence##CR407612|GBAS|2631|glioblastoma amplified sequence##DQ892309|GBAS|2631|glioblastoma amplified sequence##DQ895508|GBAS|2631|glioblastoma amplified sequence##AK315235|PSPH|5723|phosphoserine phosphatase	0.0	
chr9	4549118	4549188	reg1003597.p1	4.015	+	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	-58716	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-249122	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-249190	-	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	113158	+	AK295831 NM_001039395	117516	-	TSC_hg19_v1_chr9_+_4679596 AK000497 NM_017913 AK000646 AK225510 BC014133 CU680796	130508	+	NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68##AK000497|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##NM_017913|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK000646|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK225510|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##BC014133|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1	0.0	
chrX	133160884	133160986	reg1034449.p1	4.015	+	TSC_hg19_v1_chrX_-_133119645 L47125 AK300168 NM_001164617 NM_001164618 NM_001164619 NM_004484	-41284	-	AB527294 CU690242 DQ349136 DQ349137 DQ349138 DQ893658 DQ895822 TSC_hg19_v1_chrX_-_133119622 Z37987 L47176 AK222761 AK222766 AK310689 BC035972 U50410	-41386	-	TSC_hg19_v1_chrX_-_132549514 AK312605 AY358507 BC017166	-611467	-	NM_001101357	210141	+	TSC_hg19_v1_chrX_+_133507317 AY157622 NM_001015877 NM_032335 NM_032458 AL832725 AK290095 AK303369 BC005994 AB058726	346442	+	TSC_hg19_v1_chrX_+_133594194 NM_000194 AK313435	433262	+	L47125|GPC3|2719|glypican 3##AK300168|GPC3|2719|glypican 3##NM_001164617|GPC3|2719|glypican 3##NM_001164618|GPC3|2719|glypican 3##NM_001164619|GPC3|2719|glypican 3##NM_004484|GPC3|2719|glypican 3##DQ349136|GPC3|2719|glypican 3##DQ349137|GPC3|2719|glypican 3##DQ349138|GPC3|2719|glypican 3##DQ893658|GPC3|2719|glypican 3##DQ895822|GPC3|2719|glypican 3##Z37987|GPC3|2719|glypican 3##L47176|GPC3|2719|glypican 3##AK222761|GPC3|2719|glypican 3##AK222766|GPC3|2719|glypican 3##AK310689|GPC3|2719|glypican 3##BC035972|GPC3|2719|glypican 3##U50410|GPC3|2719|glypican 3##AK312605|GPC4|2239|glypican 4##AY358507|GPC4|2239|glypican 4##BC017166|GPC4|2239|glypican 4##NM_001101357|CCDC160|347475|coiled-coil domain containing 160##AY157622|PHF6|84295|PHD finger protein 6##NM_001015877|PHF6|84295|PHD finger protein 6##NM_032335|PHF6|84295|PHD finger protein 6##NM_032458|PHF6|84295|PHD finger protein 6##AL832725|PHF6|84295|PHD finger protein 6##AK290095|PHF6|84295|PHD finger protein 6##AK303369|PHF6|84295|PHD finger protein 6##BC005994|PHF6|84295|PHD finger protein 6##AB058726|PHF6|84295|PHD finger protein 6##NM_000194|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##AK313435|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1	0.022619	
chr1	24920110	24920221	reg1033211.p2	4.014	+	TSC_hg19_v1_chr1_+_24882611 NM_001010980 AK124519	-37566	+	HQ317426 JN203053 NM_001251980 NM_001251982 NM_001251985 EF467309 EF431960 EF529733 AF176116 TSC_hg19_v1_chr1_+_24840858 AY906854 DQ892434 DQ895645 AF176117	-79306	+	HQ317423 HQ317445 HQ317446 NM_001251978	-86082	+	AF419855 NM_005839 TSC_hg19_v1_chr1_+_24969669	49468	+	TSC_hg19_v1_chr1_+_24969763 BC011019 BC036187	49573	+	TSC_hg19_v1_chr1_+_24969792 AK302498	49614	+	NM_001010980|C1orf130|400746|chromosome 1 open reading frame 130##AK124519|C1orf130|400746|chromosome 1 open reading frame 130##HQ317426|RCAN3|11123|RCAN family member 3##JN203053|RCAN3|11123|RCAN family member 3##NM_001251980|RCAN3|11123|RCAN family member 3##NM_001251982|RCAN3|11123|RCAN family member 3##NM_001251985|RCAN3|11123|RCAN family member 3##EF467309|RCAN3|11123|RCAN family member 3##EF431960|RCAN3|11123|RCAN family member 3##EF529733|RCAN3|11123|RCAN family member 3##AF176116|RCAN3|11123|RCAN family member 3##AY906854|RCAN3|11123|RCAN family member 3##DQ892434|RCAN3|11123|RCAN family member 3##DQ895645|RCAN3|11123|RCAN family member 3##AF176117|RCAN3|11123|RCAN family member 3##HQ317423|RCAN3|11123|RCAN family member 3##NM_001251978|RCAN3|11123|RCAN family member 3##AF419855|SRRM1|10250|serine/arginine repetitive matrix 1##NM_005839|SRRM1|10250|serine/arginine repetitive matrix 1##BC011019|SRRM1|10250|serine/arginine repetitive matrix 1##BC036187|SRRM1|10250|serine/arginine repetitive matrix 1##AK302498|SRRM1|10250|serine/arginine repetitive matrix 1	0.89305	CTCF.p2:3:0.893
chr1	47000901	47001001	reg1029089.p1	4.014	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	-28279	+	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	-140975	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-194508	+	NM_001097611	15935	-	BC002755 AB000409 AK096423 TSC_hg19_v1_chr1_-_47069922	68953	-	TSC_hg19_v1_chr1_-_47069924 AK290456	68977	-	NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##NM_001097611|KNCN|148930|kinocilin##BC002755|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AB000409|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK096423|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK290456|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1	0.668957	CTCF.p2:3:0.669
chr15	43501312	43501430	reg1032406.p2	4.014	+	TSC_hg19_v1_chr15_+_43477636 AF082569 BC009689 AK075146 AK225645 AK290665 AK295017 AF246144 AF132034 AK225143 AB590193 CR450331 CU679441 DQ894124	-23714	+	TSC_hg19_v1_chr15_+_43477603 AK290707 AF087852	-23764	+	AK308817 TSC_hg19_v1_chr15_+_43477589 NM_012142	-23916	+	AB527822 AK297146 BC096093 BC096094 BC099627 TSC_hg19_v1_chr15_-_43513189	11735	-	TSC_hg19_v1_chr15_-_43513214 AK297663 M29399	11835	-	TSC_hg19_v1_chr15_-_43513234 M30646 M30647 NM_000119 NM_001114134	11907	-	AF082569|CCNDBP1|23582|cyclin D-type binding-protein 1##BC009689|CCNDBP1|23582|cyclin D-type binding-protein 1##AK075146|CCNDBP1|23582|cyclin D-type binding-protein 1##AK225645|CCNDBP1|23582|cyclin D-type binding-protein 1##AK290665|CCNDBP1|23582|cyclin D-type binding-protein 1##AK295017|CCNDBP1|23582|cyclin D-type binding-protein 1##AF246144|CCNDBP1|23582|cyclin D-type binding-protein 1##AF132034|CCNDBP1|23582|cyclin D-type binding-protein 1##AK225143|CCNDBP1|23582|cyclin D-type binding-protein 1##CR450331|CCNDBP1|23582|cyclin D-type binding-protein 1##DQ894124|CCNDBP1|23582|cyclin D-type binding-protein 1##AK290707|CCNDBP1|23582|cyclin D-type binding-protein 1##AF087852|CCNDBP1|23582|cyclin D-type binding-protein 1##AK308817|CCNDBP1|23582|cyclin D-type binding-protein 1##NM_012142|CCNDBP1|23582|cyclin D-type binding-protein 1##AK297146|EPB42|2038|erythrocyte membrane protein band 4.2##BC096093|EPB42|2038|erythrocyte membrane protein band 4.2##BC096094|EPB42|2038|erythrocyte membrane protein band 4.2##BC099627|EPB42|2038|erythrocyte membrane protein band 4.2##AK297663|EPB42|2038|erythrocyte membrane protein band 4.2##M29399|EPB42|2038|erythrocyte membrane protein band 4.2##M30646|EPB42|2038|erythrocyte membrane protein band 4.2##M30647|EPB42|2038|erythrocyte membrane protein band 4.2##NM_000119|EPB42|2038|erythrocyte membrane protein band 4.2##NM_001114134|EPB42|2038|erythrocyte membrane protein band 4.2	0.067368	
chr16	13535426	13535607	reg1030577.p1	4.014	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-540048	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-637797	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-637865	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	478515	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	629570	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	745002	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.0	
chr16	57447398	57447535	reg1032524.p1	4.014	+	BC069107 NM_002987 BC112066 BC112068	-8771	+	TSC_hg19_v1_chr16_+_57406401 AK223351 AK313806 U84487 U91835 BC001163 BC016164 NM_002996 AB590256 DQ890704 DQ891871 DQ893888 DQ895059 CU674588 CR457426	-41027	+	AK222692 TSC_hg19_v1_chr16_+_57406382	-41081	+	BC036316 TSC_hg19_v1_chr16_-_57481298 AK074263 BC002568 AK292281 AL136613 BC071740 BC024196 AF248964 NM_020313 BC067303	33888	-	AK075438 NM_020312 TSC_hg19_v1_chr16_+_57481390 AK295793 BC064946 AK293585 BC029341 BC054340 AF161444 AK290627 AK303527 CU687976 EU832506 EU832587	33910	+	TSC_hg19_v1_chr16_+_57496563 NM_032940	49092	+	BC069107|CCL17|6361|chemokine (C-C motif) ligand 17##NM_002987|CCL17|6361|chemokine (C-C motif) ligand 17##BC112066|CCL17|6361|chemokine (C-C motif) ligand 17##BC112068|CCL17|6361|chemokine (C-C motif) ligand 17##AK223351|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK313806|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U84487|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U91835|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC001163|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC016164|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002996|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ890704|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ891871|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ893888|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ895059|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##CR457426|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK222692|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK075438|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_020312|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK295793|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC064946|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK293585|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC029341|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC054340|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AF161444|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK290627|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK303527|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832506|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832587|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_032940|POLR2C|5432|polymerase (RNA) II (DNA directed) polypeptide C, 33kDa	0.0	
chr2	74212768	74212948	reg1041820.p1	4.014	+	TSC_hg19_v1_chr2_+_74154019 X97386	-58812	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-58858	+	TSC_hg19_v1_chr2_+_74153968 NM_080916 NM_080918	-58908	+	NM_144993	60591	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	162160	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	162362	+	X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##NM_080916|DGUOK|1716|deoxyguanosine kinase##NM_080918|DGUOK|1716|deoxyguanosine kinase##NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.0	
chr6	139214361	139214512	reg1035505.p2	4.014	+	NM_001077706 NM_001195037	-97189	+	AK092592 AX747618 NM_001242740	-119635	-	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	-119646	+	BC021211 TSC_hg19_v1_chr6_-_139309122 AB209143	94641	-	TSC_hg19_v1_chr6_-_139309357 BC035286 AK312938	94912	-	TSC_hg19_v1_chr6_-_139309391 BC012764 NM_001128617 NM_031922	94974	-	NM_001077706|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##NM_001195037|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##AK092592|LOC100507462|100507462|uncharacterized LOC100507462##NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A##BC021211|REPS1|85021|RALBP1 associated Eps domain containing 1##AB209143|REPS1|85021|RALBP1 associated Eps domain containing 1##BC035286|REPS1|85021|RALBP1 associated Eps domain containing 1##AK312938|REPS1|85021|RALBP1 associated Eps domain containing 1##BC012764|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_001128617|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_031922|REPS1|85021|RALBP1 associated Eps domain containing 1	0.0	
chr6	5422698	5422789	reg1031110.p1	4.014	+	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-161053	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-161481	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-161577	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	584398	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	584954	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	898142	-	NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide	0.839172	CTCF.p2:1:0.839
chr7	99746652	99746749	reg1037819.p2	4.014	+	TSC_hg19_v1_chr7_+_99746538 NM_001008395 BC105609 BC063401 BC130553 BC130559	-145	+	BC031288 NM_203397	-22381	+	AK300005 NM_001190415	-29229	-	TSC_hg19_v1_chr7_-_99756309 BC015722 NM_018275 BC094727 AK310170	9599	-	TSC_hg19_v1_chr7_-_99756347 AK054872	9648	-	BC012976 TSC_hg19_v1_chr7_-_99766194 AF316113	19503	-	NM_001008395|C7orf59|389541|chromosome 7 open reading frame 59##BC105609|C7orf59|389541|chromosome 7 open reading frame 59##BC063401|C7orf59|389541|chromosome 7 open reading frame 59##BC130553|C7orf59|389541|chromosome 7 open reading frame 59##BC130559|C7orf59|389541|chromosome 7 open reading frame 59##BC031288|MBLAC1|255374|metallo-beta-lactamase domain containing 1##NM_203397|MBLAC1|255374|metallo-beta-lactamase domain containing 1##AK300005|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa##NM_001190415|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa##BC015722|C7orf43|55262|chromosome 7 open reading frame 43##NM_018275|C7orf43|55262|chromosome 7 open reading frame 43##BC094727|C7orf43|55262|chromosome 7 open reading frame 43##AK310170|C7orf43|55262|chromosome 7 open reading frame 43##AK054872|C7orf43|55262|chromosome 7 open reading frame 43##BC012976|GAL3ST4|79690|galactose-3-O-sulfotransferase 4##AF316113|GAL3ST4|79690|galactose-3-O-sulfotransferase 4	0.819426	CTCF.p2:-25:0.819
chr1	212108842	212109022	reg1032489.p2	4.013	+	D86960 NM_014873 TSC_hg19_v1_chr1_-_212004119	-104802	-	BC034621 TSC_hg19_v1_chr1_-_212003681	-105184	-	BT019729 CU688108 AB527570 AY045701 Z29066 AK223353 AK225522 AK303092 TSC_hg19_v1_chr1_-_211848968 U11050 BC043502 BC065932 BC052807 NM_001204182 NM_001204183 NM_002497	-260024	-	AM392654 CU676544 BC030716 TSC_hg19_v1_chr1_-_212208866 BC033918 AK001363 AK022509 BC009918 BC020523 AK297225 AK001598 NM_001199809 NM_001199811 NM_001199812 NM_015434	99958	-	NM_016448 AK292343 TSC_hg19_v1_chr1_+_212209090 AK000742 AK303346	100082	+	BC033540 TSC_hg19_v1_chr1_+_212209112 AF345896	100186	+	D86960|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##NM_014873|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##BC034621|LPGAT1|9926|lysophosphatidylglycerol acyltransferase 1##BT019729|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AY045701|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##Z29066|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK223353|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK225522|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AK303092|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##U11050|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC043502|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC065932|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##BC052807|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204182|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_001204183|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##NM_002497|NEK2|4751|NIMA (never in mitosis gene a)-related kinase 2##AM392654|INTS7|25896|integrator complex subunit 7##BC030716|INTS7|25896|integrator complex subunit 7##BC033918|INTS7|25896|integrator complex subunit 7##AK001363|INTS7|25896|integrator complex subunit 7##AK022509|INTS7|25896|integrator complex subunit 7##BC009918|INTS7|25896|integrator complex subunit 7##BC020523|INTS7|25896|integrator complex subunit 7##AK297225|INTS7|25896|integrator complex subunit 7##AK001598|INTS7|25896|integrator complex subunit 7##NM_001199809|INTS7|25896|integrator complex subunit 7##NM_001199811|INTS7|25896|integrator complex subunit 7##NM_001199812|INTS7|25896|integrator complex subunit 7##NM_015434|INTS7|25896|integrator complex subunit 7##NM_016448|DTL|51514|denticleless homolog (Drosophila)##AK292343|DTL|51514|denticleless homolog (Drosophila)##AK000742|DTL|51514|denticleless homolog (Drosophila)##AK303346|DTL|51514|denticleless homolog (Drosophila)##BC033540|DTL|51514|denticleless homolog (Drosophila)##AF345896|DTL|51514|denticleless homolog (Drosophila)	0.0	
chr16	12707272	12707428	reg1023909.p3	4.013	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-636777	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-648266	+	NM_001130007	-696832	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	190301	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	190369	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	288118	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.109398	
chr2	231084678	231084842	reg1029187.p2	4.013	+	AL832300 BC012447 AK026488 AF280094 AF280095 BC019059 NM_004509 NM_004510 NM_080424 TSC_hg19_v1_chr2_-_231084830	-45	-	BC065524 BC034382 AK055356 TSC_hg19_v1_chr2_-_230933641 NM_152527	-151094	-	TSC_hg19_v1_chr2_+_230787218 BC017869 BC022538 NM_174899 BC033935 AK289655 AK309702	-297543	+	AK301097 NM_001185015	5683	-	AK301317 AK301267 NM_001005176 NM_007237 U36499 U36500 U63420 BC105744 BC105960 BC105743 BC054890 BC070160 BC038091	5703	+	TSC_hg19_v1_chr2_+_231191907 NM_138402	107166	+	AL832300|SP110|3431|SP110 nuclear body protein##BC012447|SP110|3431|SP110 nuclear body protein##AK026488|SP110|3431|SP110 nuclear body protein##AF280094|SP110|3431|SP110 nuclear body protein##AF280095|SP110|3431|SP110 nuclear body protein##BC019059|SP110|3431|SP110 nuclear body protein##NM_004509|SP110|3431|SP110 nuclear body protein##NM_004510|SP110|3431|SP110 nuclear body protein##NM_080424|SP110|3431|SP110 nuclear body protein##BC065524|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##BC034382|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##AK055356|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##NM_152527|SLC16A14|151473|solute carrier family 16, member 14 (monocarboxylic acid transporter 14)##BC017869|FBXO36|130888|F-box protein 36##BC022538|FBXO36|130888|F-box protein 36##NM_174899|FBXO36|130888|F-box protein 36##BC033935|FBXO36|130888|F-box protein 36##AK289655|FBXO36|130888|F-box protein 36##AK309702|FBXO36|130888|F-box protein 36##AK301097|SP110|3431|SP110 nuclear body protein##NM_001185015|SP110|3431|SP110 nuclear body protein##AK301317|SP140|11262|SP140 nuclear body protein##AK301267|SP140|11262|SP140 nuclear body protein##NM_001005176|SP140|11262|SP140 nuclear body protein##NM_007237|SP140|11262|SP140 nuclear body protein##U36499|SP140|11262|SP140 nuclear body protein##U36500|SP140|11262|SP140 nuclear body protein##U63420|SP140|11262|SP140 nuclear body protein##BC105744|SP140|11262|SP140 nuclear body protein##BC105960|SP140|11262|SP140 nuclear body protein##BC105743|SP140|11262|SP140 nuclear body protein##BC054890|SP140|11262|SP140 nuclear body protein##BC070160|SP140|11262|SP140 nuclear body protein##BC038091|SP140|11262|SP140 nuclear body protein##NM_138402|SP140L|93349|SP140 nuclear body protein-like	0.0	
chr4	24516581	24516696	reg1032375.p1	4.013	+	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	-624985	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	-1822046	+	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	-1999084	-	AF279891 TSC_hg19_v1_chr4_-_24586127	69438	-	TSC_hg19_v1_chr4_-_24586154 AK303506 BC035974	69522	-	AB001636 TSC_hg19_v1_chr4_-_24586176	69538	-	AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.128484	
chr4	71049326	71049477	reg1005995.p1	4.013	+	NM_214711 BX640924 BX648724 BX648895 BX647185 BX640892 BX647183 BX648872 AB528838 AM393471 BC146696	-29404	+	BC017835 NM_002159	-133243	+	NM_000200 BC009791 BC095438 M26665	-155249	+	EF113908 NM_017855	12841	+	AY190326 NM_152997 AY358958 BC062213 AF435080 AF086120	42421	+	BC010935 NM_005212 X66417	58930	+	NM_214711|C4orf40|401137|chromosome 4 open reading frame 40##BX640924|C4orf40|401137|chromosome 4 open reading frame 40##BX648724|C4orf40|401137|chromosome 4 open reading frame 40##BX648895|C4orf40|401137|chromosome 4 open reading frame 40##BX647185|C4orf40|401137|chromosome 4 open reading frame 40##BX640892|C4orf40|401137|chromosome 4 open reading frame 40##BX647183|C4orf40|401137|chromosome 4 open reading frame 40##BX648872|C4orf40|401137|chromosome 4 open reading frame 40##AM393471|C4orf40|401137|chromosome 4 open reading frame 40##BC146696|C4orf40|401137|chromosome 4 open reading frame 40##BC017835|HTN1|3346|histatin 1##NM_002159|HTN1|3346|histatin 1##NM_000200|HTN3|3347|histatin 3##BC009791|HTN3|3347|histatin 3##BC095438|HTN3|3347|histatin 3##M26665|HTN3|3347|histatin 3##EF113908|ODAM|54959|odontogenic, ameloblast asssociated##NM_017855|ODAM|54959|odontogenic, ameloblast asssociated##AY190326|C4orf7|260436|chromosome 4 open reading frame 7##NM_152997|C4orf7|260436|chromosome 4 open reading frame 7##AY358958|C4orf7|260436|chromosome 4 open reading frame 7##BC062213|C4orf7|260436|chromosome 4 open reading frame 7##AF435080|C4orf7|260436|chromosome 4 open reading frame 7##AF086120|C4orf7|260436|chromosome 4 open reading frame 7##BC010935|CSN3|1448|casein kappa##NM_005212|CSN3|1448|casein kappa##X66417|CSN3|1448|casein kappa	0.0	
chr6_ssto_hap7	1841643	1841742	reg1033185.p1	4.013	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.95208	CTCF.p2:-5:0.952
chr7	5124991	5125163	reg1000139.p1	4.013	+	AK293069 NM_001204456 NM_001204513 TSC_hg19_v1_chr7_+_5085490 AF226869 NM_021163	-39576	+	TSC_hg19_v1_chr7_+_5013663 BC068459 AK309798 AK308526 AK311517 BX538059 AK303831 BC026736	-111391	+	AY424288 BC037881 BC048346 TSC_hg19_v1_chr7_-_4998841 AK094524 BC067905 NM_001100600 NM_198403	-126278	-	TSC_hg19_v1_chr7_+_5229863 AL080155 NM_001033518 NM_001033519 NM_015610 NM_016003 AK024279 BC007596 AK023041	104752	+	TSC_hg19_v1_chr7_+_5229890 AK315468 BC004116 BC021200	104820	+	TSC_hg19_v1_chr7_+_5229917 BC021012 BC021068	104838	+	AK293069|RBAK|57786|RB-associated KRAB zinc finger##NM_001204456|RBAK|57786|RB-associated KRAB zinc finger##NM_001204513|RBAK-LOC389458|100533952|RBAK-LOC389458 readthrough##NM_021163|RBAK|57786|RB-associated KRAB zinc finger##BC068459|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK309798|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK308526|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK311517|RNF216P1|441191|ring finger protein 216 pseudogene 1##BX538059|RNF216P1|441191|ring finger protein 216 pseudogene 1##AK303831|RNF216P1|441191|ring finger protein 216 pseudogene 1##BC026736|RNF216P1|441191|ring finger protein 216 pseudogene 1##AY424288|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC037881|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC048346|MMD2|221938|monocyte to macrophage differentiation-associated 2##AK094524|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC067905|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_001100600|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_198403|MMD2|221938|monocyte to macrophage differentiation-associated 2##AL080155|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033518|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033519|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_015610|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_016003|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK024279|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC007596|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK023041|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AK315468|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC004116|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021200|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021012|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021068|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2	0.015938	
chr9	87671012	87671109	reg1031419.p1	4.013	+	U12140 TSC_hg19_v1_chr9_+_87285349	-385728	+	TSC_hg19_v1_chr9_+_87284737 BC031835	-386308	+	TSC_hg19_v1_chr9_+_87284681 AF410899 AF410900 AF410901	-386364	+	AB028958 TSC_hg19_v1_chr9_-_88356870 AK001544 BC060815 AK295774 NM_015239	685811	-	AK292239 NM_024635 TSC_hg19_v1_chr9_+_88556070 AK025266 AK225237	885014	+	TSC_hg19_v1_chr9_+_88556124 BC117427 BC117429	885118	+	U12140|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##BC031835|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410899|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410900|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AF410901|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB028958|AGTPBP1|23287|ATP/GTP binding protein 1##AK001544|AGTPBP1|23287|ATP/GTP binding protein 1##BC060815|AGTPBP1|23287|ATP/GTP binding protein 1##AK295774|AGTPBP1|23287|ATP/GTP binding protein 1##NM_015239|AGTPBP1|23287|ATP/GTP binding protein 1##AK292239|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##NM_024635|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK025266|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##AK225237|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117427|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit##BC117429|NAA35|60560|N(alpha)-acetyltransferase 35, NatC auxiliary subunit	0.0	
chr10	17272590	17272771	reg1023029.p1	4.012	+	TSC_hg19_v1_chr10_-_17271978 BC078172	-694	-	TSC_hg19_v1_chr10_+_17271962 AK093924	-701	+	TSC_hg19_v1_chr10_+_17271887 M25246	-792	+	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	223534	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	223685	-	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	386693	-	AK093924|VIM|7431|vimentin##M25246|VIM|7431|vimentin##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A	0.0	
chr10	35617455	35617521	reg1034491.p2	4.012	+	AF429969 AK057280 NM_181698	-81536	+	AK289379 NM_182721 NM_182722 NM_182723 NM_182724 NM_182725 AK291566	-132658	+	D14826 NM_182717 NM_182718 NM_182719 NM_182720 AK290612 AF069065 U44836	-133403	+	TSC_hg19_v1_chr10_+_35625400 AK314666	7968	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	8306	+	AK074504 NM_153368	276849	+	AF429969|CCNY|219771|cyclin Y##AK057280|CCNY|219771|cyclin Y##NM_181698|CCNY|219771|cyclin Y##AK289379|CREM|1390|cAMP responsive element modulator##NM_182721|CREM|1390|cAMP responsive element modulator##NM_182722|CREM|1390|cAMP responsive element modulator##NM_182723|CREM|1390|cAMP responsive element modulator##NM_182724|CREM|1390|cAMP responsive element modulator##NM_182725|CREM|1390|cAMP responsive element modulator##AK291566|CREM|1390|cAMP responsive element modulator##D14826|CREM|1390|cAMP responsive element modulator##NM_182717|CREM|1390|cAMP responsive element modulator##NM_182718|CREM|1390|cAMP responsive element modulator##NM_182719|CREM|1390|cAMP responsive element modulator##NM_182720|CREM|1390|cAMP responsive element modulator##AK290612|CREM|1390|cAMP responsive element modulator##AF069065|CREM|1390|cAMP responsive element modulator##U44836|CREM|1390|cAMP responsive element modulator##AK314666|CCNY|219771|cyclin Y##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa	0.0	
chr10	79137877	79137999	reg1030745.p1	4.012	+	AF267860 NM_032024	-1595420	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1976373	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1976457	-	AF118141 TSC_hg19_v1_chr10_-_79397246	259287	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	259398	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	259468	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.0	
chr12	68041697	68041786	reg1027023.p1	4.012	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-378311	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-378569	+	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	-378639	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	882	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	511681	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	577811	-	BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26	0.0	
chr17	1358658	1358778	reg1034780.p1	4.012	+	TSC_hg19_v1_chr17_-_1303556 NM_006761	-55165	-	TSC_hg19_v1_chr17_-_1303504 BT007161 CU674076 EU176525 U28936 AB590347 BC000179 AX775995 U43399 U43430 U54778 U20972 BC001440 AY883089 AK295260 AK295997 AK296050 AK296555 AK128785 AK316185 AK316201	-55249	-	TSC_hg19_v1_chr17_-_1248347 L13388	-110362	-	BT007277 DQ891147 DQ894327 AB528363 TSC_hg19_v1_chr17_-_1359527 D10656 BC001718 BC009837 AK291060 BC008506 NM_005206 NM_016823	774	-	TSC_hg19_v1_chr17_-_1389055 NM_001080950	30320	-	TSC_hg19_v1_chr17_-_1389335 AK304782	30678	-	NM_006761|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BT007161|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##EU176525|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U28936|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC000179|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43399|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43430|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U54778|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U20972|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC001440|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AY883089|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295260|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295997|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296050|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296555|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK128785|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316185|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316201|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BT007277|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##DQ891147|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##DQ894327|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##D10656|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC001718|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC009837|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##AK291060|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC008506|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_005206|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_016823|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_001080950|MYO1C|4641|myosin IC##AK304782|MYO1C|4641|myosin IC	0.0	
chr21	38640067	38640205	reg1027406.p2	4.012	+	TSC_hg19_v1_chr21_-_38639642 AJ001867 AK300024 AK312707 D87343 NM_006052 AK303624	-308	-	TSC_hg19_v1_chr21_-_38639617 AK316460 AK299662	-528	-	BC029827 TSC_hg19_v1_chr21_+_38593064	-47077	+	TSC_hg19_v1_chr21_-_38640233 BX648191 BC110655	99	-	TSC_hg19_v1_chr21_+_38739208 AB015282	99110	+	AF108830 NM_101395 AB015283 AB015284	99734	+	AJ001867|DSCR3|10311|Down syndrome critical region gene 3##AK300024|DSCR3|10311|Down syndrome critical region gene 3##AK312707|DSCR3|10311|Down syndrome critical region gene 3##D87343|DSCR3|10311|Down syndrome critical region gene 3##NM_006052|DSCR3|10311|Down syndrome critical region gene 3##AK303624|DSCR3|10311|Down syndrome critical region gene 3##AK316460|DSCR3|10311|Down syndrome critical region gene 3##AK299662|DSCR3|10311|Down syndrome critical region gene 3##BC029827|DSCR9|257203|Down syndrome critical region gene 9 (non-protein coding)##BX648191|DSCR3|10311|Down syndrome critical region gene 3##BC110655|DSCR3|10311|Down syndrome critical region gene 3##AB015282|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A	0.0	
chr21	47061127	47061308	reg1035055.p2	4.012	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-98885	-	AK303168 NM_001205207	-106683	-	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	-185799	+	TSC_hg19_v1_chr21_+_47063638 AK310131	2412	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	208671	+	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	340468	+	U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1##AK310131|PCBP3|54039|poly(rC) binding protein 3##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1	0.0	
chr2	229546266	229546396	reg1030497.p1	4.012	+	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-499969	-	AK097409 NM_178821 BC036377 AK098821 AK301861	-809979	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	-867740	+	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	589674	-	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	1032917	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	1240330	-	HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12	0.726089	CTCF.p2:-22:0.726
chr22	37710730	37710825	reg1017370.p1	4.012	+	BC033693 BC041161 AK024428 TSC_hg19_v1_chr22_+_37678584 CR456551 AK315052	-32201	+	TSC_hg19_v1_chr22_+_37678548 AK304453 BC017780	-32240	+	AF125349 AF075458 NM_013385 TSC_hg19_v1_chr22_+_37678513	-32309	+	TSC_hg19_v1_chr22_-_37823515 NM_052906	112751	-	AB463116 CU013118 CU013406 CR456518 U94352 AK297833 TSC_hg19_v1_chr22_-_37882426 AK292123 AK297149 AK316555 NM_001166343 BC094814 NM_002405	171568	-	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	204530	-	BC033693|CYTH4|27128|cytohesin 4##BC041161|CYTH4|27128|cytohesin 4##AK024428|CYTH4|27128|cytohesin 4##CR456551|CYTH4|27128|cytohesin 4##AK315052|CYTH4|27128|cytohesin 4##AK304453|CYTH4|27128|cytohesin 4##BC017780|CYTH4|27128|cytohesin 4##AF125349|CYTH4|27128|cytohesin 4##AF075458|CYTH4|27128|cytohesin 4##NM_013385|CYTH4|27128|cytohesin 4##NM_052906|ELFN2|114794|extracellular leucine-rich repeat and fibronectin type III domain containing 2##CU013118|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CU013406|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##CR456518|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##U94352|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297833|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK292123|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK297149|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AK316555|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166343|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##BC094814|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_002405|MFNG|4242|MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10	0.0	
chr2	7237672	7237819	reg1005910.p2	4.012	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-180158	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-219882	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-231042	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1584458	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1739974	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1906076	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr7	99642458	99642564	reg1027328.p1	4.012	+	TSC_hg19_v1_chr7_+_99627917 U09848	-14573	+	BC112224 BC113697 CU692588 EU446909 HQ258578 TSC_hg19_v1_chr7_+_99621246	-21346	+	TSC_hg19_v1_chr7_+_99613225 AL833578 NM_003439 AF454940 AK054676 AY260738 BC022378 BX640646 AK091471 AX747005 AK074116	-29286	+	AK075324 TSC_hg19_v1_chr7_+_99647394 AK292267 AK313884	4887	+	NM_145914 TSC_hg19_v1_chr7_+_99647416 CR749301 BC047309 AK301871	4919	+	TSC_hg19_v1_chr7_-_99679347 BC011887 BC025265 BC013603 AK297625 AF193057 AF217988 AK315479 AK091984 AX747291 NM_017715 NM_032924	36816	-	U09848|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC112224|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC113697|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##EU446909|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##HQ258578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AL833578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##NM_003439|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AF454940|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK054676|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AY260738|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC022378|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BX640646|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK091471|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK074116|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK075324|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK292267|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK313884|ZSCAN21|7589|zinc finger and SCAN domain containing 21##NM_145914|ZSCAN21|7589|zinc finger and SCAN domain containing 21##CR749301|ZSCAN21|7589|zinc finger and SCAN domain containing 21##BC047309|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK301871|ZSCAN21|7589|zinc finger and SCAN domain containing 21##BC011887|ZNF3|7551|zinc finger protein 3##BC025265|ZNF3|7551|zinc finger protein 3##BC013603|ZNF3|7551|zinc finger protein 3##AK297625|ZNF3|7551|zinc finger protein 3##AF193057|ZNF3|7551|zinc finger protein 3##AF217988|ZNF3|7551|zinc finger protein 3##AK315479|ZNF3|7551|zinc finger protein 3##AK091984|ZNF3|7551|zinc finger protein 3##NM_017715|ZNF3|7551|zinc finger protein 3##NM_032924|ZNF3|7551|zinc finger protein 3	0.996524	CTCF.p2:29:0.281	CTCF.p2:41:0.716
chr8	23339689	23339779	reg1034349.p2	4.012	+	TSC_hg19_v1_chr8_-_23315197 BC034477 NM_001128930 NM_004901	-24521	-	AJ131358 TSC_hg19_v1_chr8_-_23315161 AK300464 AF016032	-24580	-	TSC_hg19_v1_chr8_-_23261684 NM_002318	-78036	-	NM_016612 TSC_hg19_v1_chr8_+_23386375	46636	+	TSC_hg19_v1_chr8_+_23386395 BC132799 BC132801	46680	+	AK074708 AK223194 AF223466 AY032628 BC015013 TSC_hg19_v1_chr8_+_23386513 HQ258387 AK075313 AL833186	46789	+	BC034477|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_001128930|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_004901|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AJ131358|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AK300464|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AF016032|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_002318|LOXL2|4017|lysyl oxidase-like 2##NM_016612|SLC25A37|51312|solute carrier family 25, member 37##BC132799|SLC25A37|51312|solute carrier family 25, member 37##BC132801|SLC25A37|51312|solute carrier family 25, member 37##AK074708|SLC25A37|51312|solute carrier family 25, member 37##AK223194|SLC25A37|51312|solute carrier family 25, member 37##AF223466|SLC25A37|51312|solute carrier family 25, member 37##AY032628|SLC25A37|51312|solute carrier family 25, member 37##BC015013|SLC25A37|51312|solute carrier family 25, member 37##HQ258387|SLC25A37|51312|solute carrier family 25, member 37##AK075313|SLC25A37|51312|solute carrier family 25, member 37##AL833186|SLC25A37|51312|solute carrier family 25, member 37	0.0	
chr10	105324693	105324775	reg1034401.p1	4.011	+	NM_004210 U87864	-71000	+	BC043367 NM_001129742	-85738	-	BC036193 BC036208 NM_001001412	-106089	-	AK299620 TSC_hg19_v1_chr10_+_105344798	20033	+	AB385330 TSC_hg19_v1_chr10_-_105420936	96174	-	TSC_hg19_v1_chr10_-_105421464 AK294454	96715	-	NM_004210|NEURL|9148|neuralized homolog (Drosophila)##U87864|NEURL|9148|neuralized homolog (Drosophila)##BC043367|CALHM3|119395|calcium homeostasis modulator 3##NM_001129742|CALHM3|119395|calcium homeostasis modulator 3##BC036193|CALHM1|255022|calcium homeostasis modulator 1##BC036208|CALHM1|255022|calcium homeostasis modulator 1##NM_001001412|CALHM1|255022|calcium homeostasis modulator 1##AK299620|NEURL|9148|neuralized homolog (Drosophila)##AK294454|SH3PXD2A|9644|SH3 and PX domains 2A	0.922915	CTCF.p2:13:0.923
chr11	85840897	85840963	reg1021916.p1	4.011	+	AK300275 NM_001206947	-60020	-	TSC_hg19_v1_chr11_-_85780127 AB210017 NM_001008660 NM_001206946 NM_007166 AK291414	-60806	-	TSC_hg19_v1_chr11_-_85780088 BC064357	-60835	-	TSC_hg19_v1_chr11_+_85955830 NM_003797 NM_152991 AK292120 AF080227	114929	+	AF070418 TSC_hg19_v1_chr11_+_85956058	115119	+	AF099032 U90651 TSC_hg19_v1_chr11_+_85956254	115287	+	AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AB210017|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001008660|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206946|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_007166|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AK291414|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC064357|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_003797|EED|8726|embryonic ectoderm development##NM_152991|EED|8726|embryonic ectoderm development##AK292120|EED|8726|embryonic ectoderm development##AF080227|EED|8726|embryonic ectoderm development##AF070418|EED|8726|embryonic ectoderm development##AF099032|EED|8726|embryonic ectoderm development##U90651|EED|8726|embryonic ectoderm development	0.0	
chr14	74213235	74213339	reg1038224.p1	4.011	+	CR457112 BC039577 AK290980 TSC_hg19_v1_chr14_-_74181085 AF320308 BC007712 NM_006029	-32526	-	NM_001201366 NM_031427 AF542071 BC005343 AL833654 AK315392	-101634	+	DQ082756 NM_001037162	-129740	+	BC015668 TSC_hg19_v1_chr14_-_74226640	13351	-	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	13678	-	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	40632	-	CR457112|PNMA1|9240|paraneoplastic antigen MA1##BC039577|PNMA1|9240|paraneoplastic antigen MA1##AK290980|PNMA1|9240|paraneoplastic antigen MA1##AF320308|PNMA1|9240|paraneoplastic antigen MA1##BC007712|PNMA1|9240|paraneoplastic antigen MA1##NM_006029|PNMA1|9240|paraneoplastic antigen MA1##NM_001201366|DNAL1|83544|dynein, axonemal, light chain 1##NM_031427|DNAL1|83544|dynein, axonemal, light chain 1##AF542071|DNAL1|83544|dynein, axonemal, light chain 1##BC005343|DNAL1|83544|dynein, axonemal, light chain 1##AL833654|DNAL1|83544|dynein, axonemal, light chain 1##AK315392|DNAL1|83544|dynein, axonemal, light chain 1##DQ082756|ACOT6|641372|acyl-CoA thioesterase 6##NM_001037162|ACOT6|641372|acyl-CoA thioesterase 6##BC015668|C14orf43|91748|chromosome 14 open reading frame 43##AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43	0.0	
chr1	57223979	57224066	reg1035644.p1	4.011	+	TSC_hg19_v1_chr1_+_57110986 AK314011 NM_006252 U06454 BC069680 BC069740 BC069823 EF056019	-113120	+	TSC_hg19_v1_chr1_-_57045237 NM_003713	-178777	-	AK312439 TSC_hg19_v1_chr1_-_57045216	-178805	-	AK125198 NM_001004303 TSC_hg19_v1_chr1_-_57285379	61351	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	96486	+	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	207694	-	AK314011|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_006252|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##U06454|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069680|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069740|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069823|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##EF056019|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_003713|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK125198|C1orf168|199920|chromosome 1 open reading frame 168##NM_001004303|C1orf168|199920|chromosome 1 open reading frame 168##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide	0.976892	CTCF.p2:-17:0.956
chr16	14013242	14013401	reg1020759.p1	4.011	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-1017853	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-1115602	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-1115670	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	710	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	151765	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	267197	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.02235	
chr22	19879916	19879992	reg1029450.p3	4.011	+	TSC_hg19_v1_chr22_-_19842398 BC012060 NM_024627 BC008696 AB051432 AL832509 AF301895 AF238328 AY007378 NM_053004	-37549	-	TSC_hg19_v1_chr22_-_19842337 AK291262 BX640785 BX640969 BX640998	-37613	-	AF012130 AF012131 AF373867 NM_005992 NM_080646 NM_080647	-135729	+	TSC_hg19_v1_chr22_-_19929293 AB209724	49324	-	NM_000754 TSC_hg19_v1_chr22_+_19929294	49326	+	M58525 TSC_hg19_v1_chr22_+_19929321 AK130031 AK290440 BC000419 BC005867	49369	+	BC012060|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_024627|C22orf29|79680|chromosome 22 open reading frame 29##BC008696|C22orf29|79680|chromosome 22 open reading frame 29##AB051432|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AL832509|C22orf29|79680|chromosome 22 open reading frame 29##AF301895|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AF238328|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AY007378|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_053004|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AK291262|C22orf29|79680|chromosome 22 open reading frame 29##BX640785|C22orf29|79680|chromosome 22 open reading frame 29##BX640969|C22orf29|79680|chromosome 22 open reading frame 29##BX640998|C22orf29|79680|chromosome 22 open reading frame 29##AF012130|TBX1|6899|T-box 1##AF012131|TBX1|6899|T-box 1##AF373867|TBX1|6899|T-box 1##NM_005992|TBX1|6899|T-box 1##NM_080646|TBX1|6899|T-box 1##NM_080647|TBX1|6899|T-box 1##AB209724|TXNRD2|10587|thioredoxin reductase 2##NM_000754|COMT|1312|catechol-O-methyltransferase##M58525|COMT|1312|catechol-O-methyltransferase##AK130031|COMT|1312|catechol-O-methyltransferase##AK290440|COMT|1312|catechol-O-methyltransferase##BC000419|COMT|1312|catechol-O-methyltransferase##BC005867|COMT|1312|catechol-O-methyltransferase	0.0	
chr8	124050645	124050777	reg1029458.p1	4.011	+	TSC_hg19_v1_chr8_+_123963651 EU446694 AB083653	-87012	+	TSC_hg19_v1_chr8_+_123794108 AB020661	-256608	+	BC042145 TSC_hg19_v1_chr8_+_123794000	-256717	+	BC002457 TSC_hg19_v1_chr8_-_124054522	3796	-	AY358818 TSC_hg19_v1_chr8_-_124054540 AK303826	3829	-	TSC_hg19_v1_chr8_-_124054594 NM_001134671 NM_024295	3908	-	EU446694|ZHX2|22882|zinc fingers and homeoboxes 2##AB083653|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##BC002457|DERL1|79139|Der1-like domain family, member 1##AY358818|DERL1|79139|Der1-like domain family, member 1##AK303826|DERL1|79139|Der1-like domain family, member 1##NM_001134671|DERL1|79139|Der1-like domain family, member 1##NM_024295|DERL1|79139|Der1-like domain family, member 1	0.934204	CTCF.p2:2:0.934
chr8	61585177	61585298	reg1035787.p1	4.011	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-155487	+	TSC_hg19_v1_chr8_+_61429570 X12953 BC008929	-155673	+	TSC_hg19_v1_chr8_+_61429545 AK312344	-155691	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	6051	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	6165	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	615313	+	M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##X12953|RAB2A|5862|RAB2A, member RAS oncogene family##BC008929|RAB2A|5862|RAB2A, member RAS oncogene family##AK312344|RAB2A|5862|RAB2A, member RAS oncogene family##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1	0.0	
chr9	132251235	132251302	reg1028332.p2	4.011	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-167973	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-310728	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-310761	-	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	86	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	173	+	BC112353 AK093122 AX747938 NM_199350	131769	-	AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50	0.0	
chr12	31035768	31035891	reg1034991.p2	4.010	+	AY074490 AY074491 NM_001002259 NM_001206856 NM_023925 NM_032156	-128382	-	TSC_hg19_v1_chr12_-_30848807 NM_006390	-186963	-	U77494 TSC_hg19_v1_chr12_-_30848794	-187059	-	TSC_hg19_v1_chr12_+_31079362 BC084571	43532	+	TSC_hg19_v1_chr12_+_31079681 AK293947	43831	+	AK300920 NM_001080509 TSC_hg19_v1_chr12_+_31079866 BC146917 BC146922	44035	+	AY074490|CAPRIN2|65981|caprin family member 2##AY074491|CAPRIN2|65981|caprin family member 2##NM_001002259|CAPRIN2|65981|caprin family member 2##NM_001206856|CAPRIN2|65981|caprin family member 2##NM_023925|CAPRIN2|65981|caprin family member 2##NM_032156|CAPRIN2|65981|caprin family member 2##NM_006390|IPO8|10526|importin 8##U77494|IPO8|10526|importin 8##AK293947|TSPAN11|441631|tetraspanin 11##AK300920|TSPAN11|441631|tetraspanin 11##NM_001080509|TSPAN11|441631|tetraspanin 11##BC146917|TSPAN11|441631|tetraspanin 11##BC146922|TSPAN11|441631|tetraspanin 11	0.056482	
chr14	98674573	98674640	reg1033914.p1	4.010	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-1410891	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-1705822	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-1705860	+	AK098639 NM_182560	503343	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	1063011	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	1063284	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.021335	
chr19	3308259	3308360	reg1036196.p2	4.010	+	BC047522 DQ891648 DQ894837 TSC_hg19_v1_chr19_+_3224751 CU690430 AF329266	-83566	+	BC028101 NM_021938 AB209067 NM_001172673 TSC_hg19_v1_chr19_+_3224705	-83605	+	TSC_hg19_v1_chr19_+_3198814 BC008920	-109484	+	TSC_hg19_v1_chr19_+_3359531 NM_001245005 NM_205843 X12492 AK304816 AK289885	51147	+	TSC_hg19_v1_chr19_+_3366562 NM_001245002 NM_001245004 NM_005597 BC012120	58246	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	58271	+	BC047522|CELF5|60680|CUGBP, Elav-like family member 5##DQ891648|CELF5|60680|CUGBP, Elav-like family member 5##DQ894837|CELF5|60680|CUGBP, Elav-like family member 5##AF329266|CELF5|60680|CUGBP, Elav-like family member 5##BC028101|CELF5|60680|CUGBP, Elav-like family member 5##NM_021938|CELF5|60680|CUGBP, Elav-like family member 5##AB209067|CELF5|60680|CUGBP, Elav-like family member 5##NM_001172673|CELF5|60680|CUGBP, Elav-like family member 5##BC008920|NCLN|56926|nicalin##NM_001245005|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_205843|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X12492|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK304816|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK289885|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245002|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245004|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_005597|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC012120|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)	0.593799	CTCF.p2:-13:0.554
chr2	132287173	132287350	reg1032431.p2	4.010	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-1755	+	AK304811 TSC_hg19_v1_chr2_+_132250648 AK293811 AK300337 AK303293 AK308371 BC093080	-36676	+	TSC_hg19_v1_chr2_-_132250072 NM_001085365	-37200	-	AF038169 NM_013310	192802	+	BC043584 NM_214461	271972	-	AK122643 NM_001508	886885	+	BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK304811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK293811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK300337|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK303293|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK308371|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC093080|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39	0.0	
chr5	118914746	118914883	reg1031724.p2	4.010	+	TSC_hg19_v1_chr5_+_118788215 NM_000414 NM_001199292 AK301212 AK312449 NM_001199291 BC003098 AK293254 AB208932 X87176 AK299685 AK298075 CU678374 DQ891866 DQ895055	-126618	+	TSC_hg19_v1_chr5_+_118691713 AF099935 AK001850 AF099936 CU675493	-223076	+	BC007014 NM_014350 BC005352 TSC_hg19_v1_chr5_+_118691687	-223196	+	AF427126 AY692447 NM_001163991 NM_182761 BC040622 BC128242 BC128243	50502	+	BC011941 TSC_hg19_v1_chr5_-_119740564	825736	-	TSC_hg19_v1_chr5_+_119799994 BC092474	885134	+	NM_000414|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199292|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK301212|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK312449|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199291|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC003098|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK293254|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##X87176|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK299685|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK298075|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ891866|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ895055|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AF099935|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001850|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099936|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC007014|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_014350|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC005352|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF427126|FAM170A|340069|family with sequence similarity 170, member A##AY692447|FAM170A|340069|family with sequence similarity 170, member A##NM_001163991|FAM170A|340069|family with sequence similarity 170, member A##NM_182761|FAM170A|340069|family with sequence similarity 170, member A##BC040622|FAM170A|340069|family with sequence similarity 170, member A##BC128242|FAM170A|340069|family with sequence similarity 170, member A##BC128243|FAM170A|340069|family with sequence similarity 170, member A##BC092474|PRR16|51334|proline rich 16	0.996124	CTCF.p2:-11:0.996
chr5	176514072	176514183	reg1034881.p1	4.010	+	TSC_hg19_v1_chr5_+_176513910 BC011847 AK301169 AK225280 AK225909 NM_002011 NM_213647 L03840	-245	+	AK297448 AK297584 NM_012279 TSC_hg19_v1_chr5_+_176449708 AK295549 AF083340 AK026627 AK300065 BC007775 AL359576 CR749692 AK131469 AK300738 AB463365 AM392799 AM393768	-64408	+	AK304794 BX537376 NM_016290 AK023044 BC032561 BC006078 BC014069 AF349313 NM_001199297 NM_001199298 TSC_hg19_v1_chr5_-_176433806	-80539	-	NM_022963 X57205 AF202063 EU826602 AF359241 AB590389 DQ893458 DQ896348 EU826603 JN007471 JN007472 JN007473 JN007474 JN007475 JN007476 JN007477 JN007478 JN007479 JN007480 JN007481 JN007482	2449	+	TSC_hg19_v1_chr5_+_176560037 AK126591	45903	+	TSC_hg19_v1_chr5_+_176560056 NM_172349	45940	+	BC011847|FGFR4|2264|fibroblast growth factor receptor 4##AK301169|FGFR4|2264|fibroblast growth factor receptor 4##AK225280|FGFR4|2264|fibroblast growth factor receptor 4##AK225909|FGFR4|2264|fibroblast growth factor receptor 4##NM_002011|FGFR4|2264|fibroblast growth factor receptor 4##NM_213647|FGFR4|2264|fibroblast growth factor receptor 4##L03840|FGFR4|2264|fibroblast growth factor receptor 4##AK297448|ZNF346|23567|zinc finger protein 346##NM_012279|ZNF346|23567|zinc finger protein 346##AK295549|ZNF346|23567|zinc finger protein 346##AF083340|ZNF346|23567|zinc finger protein 346##AK026627|ZNF346|23567|zinc finger protein 346##AK300065|ZNF346|23567|zinc finger protein 346##BC007775|ZNF346|23567|zinc finger protein 346##AL359576|ZNF346|23567|zinc finger protein 346##CR749692|ZNF346|23567|zinc finger protein 346##AK131469|ZNF346|23567|zinc finger protein 346##AK300738|ZNF346|23567|zinc finger protein 346##AM392799|ZNF346|23567|zinc finger protein 346##AM393768|ZNF346|23567|zinc finger protein 346##AK304794|UIMC1|51720|ubiquitin interaction motif containing 1##BX537376|UIMC1|51720|ubiquitin interaction motif containing 1##NM_016290|UIMC1|51720|ubiquitin interaction motif containing 1##AK023044|UIMC1|51720|ubiquitin interaction motif containing 1##BC032561|UIMC1|51720|ubiquitin interaction motif containing 1##BC006078|UIMC1|51720|ubiquitin interaction motif containing 1##AF349313|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199297|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199298|UIMC1|51720|ubiquitin interaction motif containing 1##NM_022963|FGFR4|2264|fibroblast growth factor receptor 4##X57205|FGFR4|2264|fibroblast growth factor receptor 4##AF202063|FGFR4|2264|fibroblast growth factor receptor 4##EU826602|FGFR4|2264|fibroblast growth factor receptor 4##AF359241|FGFR4|2264|fibroblast growth factor receptor 4##DQ893458|FGFR4|2264|fibroblast growth factor receptor 4##DQ896348|FGFR4|2264|fibroblast growth factor receptor 4##EU826603|FGFR4|2264|fibroblast growth factor receptor 4##AK126591|NSD1|64324|nuclear receptor binding SET domain protein 1##NM_172349|NSD1|64324|nuclear receptor binding SET domain protein 1	0.908344	CTCF.p2:-3:0.887
chr6	82462657	82462837	reg1011737.p2	4.010	+	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	-336	-	AY740520 FJ211061 CU674334 CU675631 TSC_hg19_v1_chr6_-_82461975	-826	-	TSC_hg19_v1_chr6_+_80816397 AK289977 BC040139 M55575 AB529112 BT020063 X52446	-1646310	+	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	494666	-	TSC_hg19_v1_chr6_-_82957441 NM_015525 DQ005633 DQ005634	494721	-	AK291170 NM_006670	610175	+	AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##AY740520|FAM46A|55603|family with sequence similarity 46, member A##AK289977|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC040139|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##M55575|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BT020063|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##X52446|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##NM_015525|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005633|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005634|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein	0.0	
chr7	157021705	157021814	reg1032990.p1	4.010	+	D13635 TSC_hg19_v1_chr7_+_156931668 BC014029	-90076	+	TSC_hg19_v1_chr7_+_156931631 NM_014671	-90113	+	BC026241 TSC_hg19_v1_chr7_+_156931628	-90140	+	TSC_hg19_v1_chr7_+_157023934 AK098447	2247	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	107952	+	TSC_hg19_v1_chr7_+_157647233 BC034557	625515	+	D13635|UBE3C|9690|ubiquitin protein ligase E3C##BC014029|UBE3C|9690|ubiquitin protein ligase E3C##NM_014671|UBE3C|9690|ubiquitin protein ligase E3C##BC026241|UBE3C|9690|ubiquitin protein ligase E3C##AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC034557|LOC100506585|100506585|uncharacterized LOC100506585	0.963202	CTCF.p2:-12:0.963
chr7	99724626	99724704	reg1028486.p2	4.010	+	BC031288 NM_203397	-346	+	AK300005 NM_001190415	-7194	-	AY359100 BC032339 NM_152755 AK075537 BC019903 DQ891593 EU176583	-7352	+	TSC_hg19_v1_chr7_+_99746538 NM_001008395 BC105609 BC063401 BC130553 BC130559	21890	+	TSC_hg19_v1_chr7_-_99756309 BC015722 NM_018275 BC094727 AK310170	31634	-	TSC_hg19_v1_chr7_-_99756347 AK054872	31683	-	BC031288|MBLAC1|255374|metallo-beta-lactamase domain containing 1##NM_203397|MBLAC1|255374|metallo-beta-lactamase domain containing 1##AK300005|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa##NM_001190415|TAF6|6878|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa##AY359100|CNPY4|245812|canopy 4 homolog (zebrafish)##BC032339|CNPY4|245812|canopy 4 homolog (zebrafish)##NM_152755|CNPY4|245812|canopy 4 homolog (zebrafish)##AK075537|CNPY4|245812|canopy 4 homolog (zebrafish)##BC019903|CNPY4|245812|canopy 4 homolog (zebrafish)##DQ891593|CNPY4|245812|canopy 4 homolog (zebrafish)##EU176583|CNPY4|245812|canopy 4 homolog (zebrafish)##NM_001008395|C7orf59|389541|chromosome 7 open reading frame 59##BC105609|C7orf59|389541|chromosome 7 open reading frame 59##BC063401|C7orf59|389541|chromosome 7 open reading frame 59##BC130553|C7orf59|389541|chromosome 7 open reading frame 59##BC130559|C7orf59|389541|chromosome 7 open reading frame 59##BC015722|C7orf43|55262|chromosome 7 open reading frame 43##NM_018275|C7orf43|55262|chromosome 7 open reading frame 43##BC094727|C7orf43|55262|chromosome 7 open reading frame 43##AK310170|C7orf43|55262|chromosome 7 open reading frame 43##AK054872|C7orf43|55262|chromosome 7 open reading frame 43	0.0	
chr14	78540160	78540247	reg1035959.p2	4.009	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-273753	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-312694	-	NM_001173978 NM_174943 BC107147 BC113929 BC113986	-312959	+	AB018286 BC152457 NM_004796	329889	+	NM_001105250 NM_138970 AK056530 BC059368 BC068469	1205501	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	2137701	-	NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001173978|C14orf178|283579|chromosome 14 open reading frame 178##NM_174943|C14orf178|283579|chromosome 14 open reading frame 178##BC107147|C14orf178|283579|chromosome 14 open reading frame 178##BC113929|C14orf178|283579|chromosome 14 open reading frame 178##BC113986|C14orf178|283579|chromosome 14 open reading frame 178##AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II	0.98003	CTCF.p2:-5:0.980
chr18	21582620	21582733	reg1038640.p1	4.009	+	AK091080 AX746769 NM_153211 BC121034 BC121035	-9882	+	TSC_hg19_v1_chr18_+_21452983 NM_000227 NM_001127718 X85107 X84392 AY327114 L34155	-129665	+	TSC_hg19_v1_chr18_+_21269563 BC093406 NM_001127717 NM_198129 AY327115 AY327116	-313089	+	TSC_hg19_v1_chr18_+_21594449 BC016833 NM_001135993 NM_001243425	11723	+	TSC_hg19_v1_chr18_+_21594754 AK074875	12080	+	AK296442 TSC_hg19_v1_chr18_+_21693341	110652	+	AK091080|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_153211|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121034|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121035|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_000227|LAMA3|3909|laminin, alpha 3##NM_001127718|LAMA3|3909|laminin, alpha 3##X85107|LAMA3|3909|laminin, alpha 3##X84392|LAMA3|3909|laminin, alpha 3##AY327114|LAMA3|3909|laminin, alpha 3##L34155|LAMA3|3909|laminin, alpha 3##BC093406|LAMA3|3909|laminin, alpha 3##NM_001127717|LAMA3|3909|laminin, alpha 3##NM_198129|LAMA3|3909|laminin, alpha 3##AY327115|LAMA3|3909|laminin, alpha 3##AY327116|LAMA3|3909|laminin, alpha 3##BC016833|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001135993|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001243425|TTC39C|125488|tetratricopeptide repeat domain 39C##AK074875|TTC39C|125488|tetratricopeptide repeat domain 39C##AK296442|TTC39C|125488|tetratricopeptide repeat domain 39C	0.081975	
chr19	17609961	17610091	reg1035589.p1	4.009	+	TSC_hg19_v1_chr19_+_17581338 AK296355 AK315935	-28686	+	TSC_hg19_v1_chr19_+_17581292 AK299852 BC059399 NM_198580	-28726	+	AK294238 TSC_hg19_v1_chr19_+_17579599	-30438	+	TSC_hg19_v1_chr19_-_17622285 AK125289	12261	-	TSC_hg19_v1_chr19_+_17622443 NM_012088	12405	+	TSC_hg19_v1_chr19_+_17622445 BC017706 BC014006 AJ243972 AB463386 DQ893462 DQ896322	12436	+	AK296355|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK315935|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK299852|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##BC059399|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##NM_198580|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK294238|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK125289|LOC100507551|100507551|uncharacterized LOC100507551##NM_012088|PGLS|25796|6-phosphogluconolactonase##BC017706|PGLS|25796|6-phosphogluconolactonase##BC014006|PGLS|25796|6-phosphogluconolactonase##AJ243972|PGLS|25796|6-phosphogluconolactonase##DQ893462|PGLS|25796|6-phosphogluconolactonase##DQ896322|PGLS|25796|6-phosphogluconolactonase	0.271168	CTCF.p2:18:0.271
chr2	124532594	124532695	reg1042363.p2	4.009	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-2019407	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-2038179	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-2124999	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	250220	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	2881063	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	2881148	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.0	
chr2	231276130	231276308	reg1034735.p1	4.009	+	TSC_hg19_v1_chr2_+_231191907 NM_138402	-84293	+	AK301317 AK301267 NM_001005176 NM_007237 U36499 U36500 U63420 BC105744 BC105960 BC105743 BC054890 BC070160 BC038091	-185756	+	AK301097 NM_001185015	-185776	-	NM_001080391 NM_001206701 NM_001206702 NM_001206703 NM_003113 TSC_hg19_v1_chr2_+_231280903	4668	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	4700	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	4737	+	NM_138402|SP140L|93349|SP140 nuclear body protein-like##AK301317|SP140|11262|SP140 nuclear body protein##AK301267|SP140|11262|SP140 nuclear body protein##NM_001005176|SP140|11262|SP140 nuclear body protein##NM_007237|SP140|11262|SP140 nuclear body protein##U36499|SP140|11262|SP140 nuclear body protein##U36500|SP140|11262|SP140 nuclear body protein##U63420|SP140|11262|SP140 nuclear body protein##BC105744|SP140|11262|SP140 nuclear body protein##BC105960|SP140|11262|SP140 nuclear body protein##BC105743|SP140|11262|SP140 nuclear body protein##BC054890|SP140|11262|SP140 nuclear body protein##BC070160|SP140|11262|SP140 nuclear body protein##BC038091|SP140|11262|SP140 nuclear body protein##AK301097|SP110|3431|SP110 nuclear body protein##NM_001185015|SP110|3431|SP110 nuclear body protein##NM_001080391|SP100|6672|SP100 nuclear antigen##NM_001206701|SP100|6672|SP100 nuclear antigen##NM_001206702|SP100|6672|SP100 nuclear antigen##NM_001206703|SP100|6672|SP100 nuclear antigen##NM_003113|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen	0.0	
chr3	34303648	34303765	reg1035479.p2	4.009	+	TSC_hg19_v1_chr3_+_33840125 AF250394 GQ131806 AB384596 CU676494 CU686637 BT007367	-463535	+	TSC_hg19_v1_chr3_+_33840120 AF151793 BC020066	-463599	+	TSC_hg19_v1_chr3_+_33840081 BC068454 AF349951	-463623	+	TSC_hg19_v1_chr3_+_35681016 BC041385 AK057559	1377395	+	BC051828 NM_016300	1380142	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	1417490	+	AF250394|PDCD6IP|10015|programmed cell death 6 interacting protein##GQ131806|PDCD6IP|10015|programmed cell death 6 interacting protein##BT007367|PDCD6IP|10015|programmed cell death 6 interacting protein##AF151793|PDCD6IP|10015|programmed cell death 6 interacting protein##BC020066|PDCD6IP|10015|programmed cell death 6 interacting protein##BC068454|PDCD6IP|10015|programmed cell death 6 interacting protein##AF349951|PDCD6IP|10015|programmed cell death 6 interacting protein##BC041385|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK057559|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	0.0	
chr4	151219282	151219377	reg1011035.p2	4.009	+	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	-219804	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-1855745	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-1855990	-	NM_006439	283747	+	TSC_hg19_v1_chr4_-_151770612 AB208838	551320	-	TSC_hg19_v1_chr4_-_151773972 BC172218	554665	-	AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.0	
chr6	73346079	73346155	reg1032661.p1	4.009	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	-14056	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	-14228	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	-14547	+	BC004267 NM_001126063	589057	-	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	626749	-	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	626856	+	AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC004267|KHDC1L|100129128|KH homology domain containing 1-like##NM_001126063|KHDC1L|100129128|KH homology domain containing 1-like##BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1	0.0	
chr7	106371705	106371885	reg1036633.p1	4.009	+	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	-70292	-	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	-446272	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	-446433	-	TSC_hg19_v1_chr7_+_106505701 AK292684	133918	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	133979	+	TSC_hg19_v1_chr7_+_106505893 NM_002649 X83368	134134	+	AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74##BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	0.0	
chr10	115540597	115540682	reg1027747.p1	4.008	+	BC037870 FJ236306 NM_182601	-16062	+	AK128811 NM_001193434 NM_001193435 NM_024889	-29427	+	TSC_hg19_v1_chr10_+_115439635 AK301437 AK223489 BC015799 AK300578 U40281 U37448 U67320	-100974	+	D42045 NM_014881 AK307187	73277	-	TSC_hg19_v1_chr10_+_115614419 NM_198514 AK090631 AX746547	73780	+	NM_000684 J03019	263170	+	BC037870|C10orf81|79949|chromosome 10 open reading frame 81##FJ236306|C10orf81|79949|chromosome 10 open reading frame 81##NM_182601|C10orf81|79949|chromosome 10 open reading frame 81##AK128811|C10orf81|79949|chromosome 10 open reading frame 81##NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81##NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81##NM_024889|C10orf81|79949|chromosome 10 open reading frame 81##AK301437|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##AK223489|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##BC015799|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##AK300578|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U40281|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U37448|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U67320|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A##NM_198514|NHLRC2|374354|NHL repeat containing 2##AK090631|NHLRC2|374354|NHL repeat containing 2##NM_000684|ADRB1|153|adrenergic, beta-1-, receptor##J03019|ADRB1|153|adrenergic, beta-1-, receptor	0.351174	CTCF.p2:-37:0.351
chr1	119870630	119870776	reg1035901.p2	4.008	+	TSC_hg19_v1_chr1_-_119683274 BC021722 CU692202 BC039889 AK223197 AJ242739 AK296799 BC044575 AK313740 AK300295 NM_015836 NM_201263	-187434	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	-187677	+	AK127536 NM_152380	-338525	-	TSC_hg19_v1_chr1_+_119911431 AK298289 NM_001005783 NM_016527 BC020863 AF231917 AF203975 AY513277	40741	+	NM_001166120	86850	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	87058	+	BC021722|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC039889|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK223197|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AJ242739|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK296799|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC044575|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK313740|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK300295|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_015836|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_201263|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15##AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)##BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2	0.022419	
chr11	77300497	77300627	reg1030691.p2	4.008	+	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	-115730	-	TSC_hg19_v1_chr11_-_77122998 AK296006 AK055228	-177563	-	AY313782 AY326450 NM_182833	-302100	-	BC040443 NM_173039 TSC_hg19_v1_chr11_+_77300718 AB028147	138	+	AB590787 AF026003 BT019907 AF005422 BC119634 BC119635 TSC_hg19_v1_chr11_-_77348840 U53454 AK315259 X91788 NM_001293	48252	-	AF380176 AB527448 TSC_hg19_v1_chr11_-_77531769 BC015360 NM_016578 AK098130	231270	-	U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK296006|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK055228|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##BC040443|AQP11|282679|aquaporin 11##NM_173039|AQP11|282679|aquaporin 11##AB028147|AQP11|282679|aquaporin 11##AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF380176|RSF1|51773|remodeling and spacing factor 1##BC015360|RSF1|51773|remodeling and spacing factor 1##NM_016578|RSF1|51773|remodeling and spacing factor 1	0.0	
chr13	78973418	78973514	reg1032013.p2	4.008	+	D90402 NM_000115 S57283 AF308156	-423750	-	AF114165 NM_001201397	-479564	-	AF114163 AF114164 TSC_hg19_v1_chr13_-_78493569	-479915	-	TSC_hg19_v1_chr13_+_79170263 BC041859 BC032872	196816	+	TSC_hg19_v1_chr13_-_79177711 L20433 NM_006237	204257	-	TSC_hg19_v1_chr13_-_79233291 AL136651 CR936764 CR936752 CR936754 BC136764 BC136765 BC028586 NM_024546	259827	-	D90402|EDNRB|1910|endothelin receptor type B##NM_000115|EDNRB|1910|endothelin receptor type B##S57283|EDNRB|1910|endothelin receptor type B##AF114165|EDNRB|1910|endothelin receptor type B##NM_001201397|EDNRB|1910|endothelin receptor type B##BC041859|LOC780529|780529|uncharacterized LOC780529##BC032872|LOC780529|780529|uncharacterized LOC780529##L20433|POU4F1|5457|POU class 4 homeobox 1##NM_006237|POU4F1|5457|POU class 4 homeobox 1##AL136651|RNF219|79596|ring finger protein 219##CR936764|RNF219|79596|ring finger protein 219##CR936752|RNF219|79596|ring finger protein 219##CR936754|RNF219|79596|ring finger protein 219##BC136764|RNF219|79596|ring finger protein 219##BC136765|RNF219|79596|ring finger protein 219##BC028586|RNF219|79596|ring finger protein 219##NM_024546|RNF219|79596|ring finger protein 219	0.0	
chr15	31600692	31600873	reg1031765.p2	4.008	+	NM_001243538	-77733	-	GQ502181 HM135791 NM_001252020	-147354	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-206865	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	18556	+	AJ430383 NM_130901	346759	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	562047	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.0	
chr17	41176683	41176863	reg1006622.p2	4.008	+	TSC_hg19_v1_chr17_-_41174433 AK290460 NM_006373	-2320	-	TSC_hg19_v1_chr17_-_41174403 AK000237	-2370	-	BC001913 BT007369 HQ258013 BC014279 TSC_hg19_v1_chr17_-_41174385 AK298536 AK097072 BC008725 BC068489 BC015041 BC090858	-2412	-	TSC_hg19_v1_chr17_+_41177247 AK290199 NM_005440 BC094842 BC104986 BC104990 AF498968 BT019394 X95456 BC018096 AB209778	553	+	AB385129 AY751490 CU687226 JN686490 U64805 NM_007298	99348	-	AF005068 BC106745 BC106746 BC114511 BC114562 AK308084 DQ333386 DQ333387 DQ363751 BC085615 TSC_hg19_v1_chr17_-_41277382 AB621825 AK307553 U14680 BC012577 BC030969 BC115037	100580	-	AK290460|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##NM_006373|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##AK000237|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC001913|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BT007369|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##HQ258013|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC014279|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##AK298536|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##AK097072|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC008725|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC068489|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC015041|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##BC090858|VAT1|10493|vesicle amine transport protein 1 homolog (T. californica)##AK290199|RND2|8153|Rho family GTPase 2##NM_005440|RND2|8153|Rho family GTPase 2##BC094842|RND2|8153|Rho family GTPase 2##BC104986|RND2|8153|Rho family GTPase 2##BC104990|RND2|8153|Rho family GTPase 2##AF498968|RND2|8153|Rho family GTPase 2##BT019394|RND2|8153|Rho family GTPase 2##X95456|RND2|8153|Rho family GTPase 2##BC018096|RND2|8153|Rho family GTPase 2##AB209778|RND2|8153|Rho family GTPase 2##AY751490|BRCA1|672|breast cancer 1, early onset##JN686490|BRCA1|672|breast cancer 1, early onset##U64805|BRCA1|672|breast cancer 1, early onset##NM_007298|BRCA1|672|breast cancer 1, early onset##AF005068|BRCA1|672|breast cancer 1, early onset##BC106745|BRCA1|672|breast cancer 1, early onset##BC106746|BRCA1|672|breast cancer 1, early onset##BC114511|BRCA1|672|breast cancer 1, early onset##BC114562|BRCA1|672|breast cancer 1, early onset##AK308084|BRCA1|672|breast cancer 1, early onset##DQ333386|BRCA1|672|breast cancer 1, early onset##DQ333387|BRCA1|672|breast cancer 1, early onset##DQ363751|BRCA1|672|breast cancer 1, early onset##BC085615|BRCA1|672|breast cancer 1, early onset##AK307553|BRCA1|672|breast cancer 1, early onset##U14680|BRCA1|672|breast cancer 1, early onset##BC012577|BRCA1|672|breast cancer 1, early onset##BC030969|BRCA1|672|breast cancer 1, early onset##BC115037|BRCA1|672|breast cancer 1, early onset	0.0	
chr2	106714699	106714786	reg1031344.p2	4.008	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	-32578	+	NM_001004720 BC000103	-246481	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	-281767	+	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	96003	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	96016	-	TSC_hg19_v1_chr2_-_106810781 NM_025076	96063	-	BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1	0.69711	CTCF.p2:7:0.697
chr2	8453525	8453592	reg1030523.p1	4.008	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1395971	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1435695	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1446855	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	368645	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	524161	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	690263	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr5	114139551	114139631	reg1026534.p2	4.008	+	BC015371 NM_170775 BC040722	-370342	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	-441130	+	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	-441542	+	TSC_hg19_v1_chr5_-_114505606 AK316422 AK296389	366013	-	AB196558 AJ272269 BC130334 AK125426 BC045164 BC046096 NM_001017397 NM_001017398 NM_018700	376396	-	AY780790 AB590094 TSC_hg19_v1_chr5_-_114598563 NM_005023	458975	-	BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK316422|TRIM36|55521|tripartite motif containing 36##AK296389|TRIM36|55521|tripartite motif containing 36##AB196558|TRIM36|55521|tripartite motif containing 36##AJ272269|TRIM36|55521|tripartite motif containing 36##BC130334|TRIM36|55521|tripartite motif containing 36##AK125426|TRIM36|55521|tripartite motif containing 36##BC045164|TRIM36|55521|tripartite motif containing 36##BC046096|TRIM36|55521|tripartite motif containing 36##NM_001017397|TRIM36|55521|tripartite motif containing 36##NM_001017398|TRIM36|55521|tripartite motif containing 36##NM_018700|TRIM36|55521|tripartite motif containing 36##AY780790|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##NM_005023|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit	0.043051	
chr5	402779	402933	reg1027483.p1	4.008	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-98566	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-131051	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-131088	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	40374	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	40494	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	70256	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.0	
chr7	1035405	1035472	reg1032419.p1	4.008	+	TSC_hg19_v1_chr7_+_1022978 AK000366	-12469	+	TSC_hg19_v1_chr7_+_1022816 BC025761 NM_017781	-12620	+	BC042434 BC053372 TSC_hg19_v1_chr7_-_1015171 BC058158 AK023185 BC110420 BC070383 AK290517 AY957566 BC103632 NM_001031617	-20249	-	TSC_hg19_v1_chr7_-_1067984 L07392 BC025971	32519	-	BC014241 NM_138445 AB464540 DQ892659 DQ895899	61706	+	NM_001039966 NM_001505 AF015257	91038	+	AK000366|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##BC025761|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##NM_017781|CYP2W1|54905|cytochrome P450, family 2, subfamily W, polypeptide 1##BC042434|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC053372|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC058158|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK023185|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC110420|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC070383|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK290517|ADAP1|11033|ArfGAP with dual PH domains 1##AY957566|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC103632|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_001031617|COX19|90639|COX19 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC025971|C7orf50|84310|chromosome 7 open reading frame 50##BC014241|GPR146|115330|G protein-coupled receptor 146##NM_138445|GPR146|115330|G protein-coupled receptor 146##DQ892659|GPR146|115330|G protein-coupled receptor 146##DQ895899|GPR146|115330|G protein-coupled receptor 146##NM_001039966|GPER|2852|G protein-coupled estrogen receptor 1##NM_001505|GPER|2852|G protein-coupled estrogen receptor 1##AF015257|GPER|2852|G protein-coupled estrogen receptor 1	0.013667	
chr12	751701	751836	reg1038930.p1	4.007	+	AB089940 NM_173593	-182226	+	NM_001130146 NM_032358 AK293165 TSC_hg19_v1_chr12_+_510809 AK027638	-240987	+	TSC_hg19_v1_chr12_-_498451 AK301150 AK301273 AB209999 BC048307 BC053893 NM_001042603 BC092417	-253166	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	410	+	TSC_hg19_v1_chr12_-_752800 AK298043	1051	-	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	20947	-	AB089940|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_173593|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_001130146|CCDC77|84318|coiled-coil domain containing 77##NM_032358|CCDC77|84318|coiled-coil domain containing 77##AK293165|CCDC77|84318|coiled-coil domain containing 77##AK027638|CCDC77|84318|coiled-coil domain containing 77##AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A##AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A##AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A##BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A##BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A##NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A##BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2	0.0	
chr14	23340312	23340436	reg1033638.p1	4.007	+	Z48481 TSC_hg19_v1_chr14_+_23305913 D26512 X90925 AB385035 CU687944 U41078	-34405	+	X83535 TSC_hg19_v1_chr14_+_23305909	-34465	+	TSC_hg19_v1_chr14_+_23305816 BC039581	-34538	+	TSC_hg19_v1_chr14_+_23340981 NM_014045 AY358399 BX161500	647	+	TSC_hg19_v1_chr14_+_23341364 AL834518 AK291030 BC113714 BC113716	1048	+	AK299238 AK096283 NM_173527 BC035663	12061	+	Z48481|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##D26512|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##X90925|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##U41078|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##X83535|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##NM_014045|LRP10|26020|low density lipoprotein receptor-related protein 10##AY358399|LRP10|26020|low density lipoprotein receptor-related protein 10##BX161500|LRP10|26020|low density lipoprotein receptor-related protein 10##AL834518|LRP10|26020|low density lipoprotein receptor-related protein 10##AK291030|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113714|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113716|LRP10|26020|low density lipoprotein receptor-related protein 10##AK299238|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##AK096283|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##NM_173527|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##BC035663|REM2|161253|RAS (RAD and GEM)-like GTP binding 2	0.0	
chr14	89831942	89832048	reg1038568.p2	4.007	+	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-541002	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-572785	-	NM_207662 BC027607 AF474376	-771242	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	46781	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	51415	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	253600	-	AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3	0.0	
chr17	79894985	79895165	reg1039013.p1	4.007	+	TSC_hg19_v1_chr17_+_79885722 BC101984 BC101987 BC104740 BC134411 BC046361 BC025326 BC063671	-9356	+	TSC_hg19_v1_chr17_-_79885601 AF059195 NM_002359	-9502	-	Y11514 TSC_hg19_v1_chr17_-_79881343 U84249 BC012327 NM_032711	-13702	-	AF218000 NM_006907 NM_153824 TSC_hg19_v1_chr17_-_79895136 AK297627 BC071842 AK303852 AK225879	6	-	BC029306 NM_001145113	10033	-	NM_178493 TSC_hg19_v1_chr17_-_79919064 BC060882	23987	-	BC134411|LOC92659|92659|uncharacterized LOC92659##BC046361|LOC92659|92659|uncharacterized LOC92659##BC025326|LOC92659|92659|uncharacterized LOC92659##BC063671|LOC92659|92659|uncharacterized LOC92659##AF059195|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)##NM_002359|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)##Y11514|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)##U84249|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)##BC012327|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)##NM_032711|MAFG|4097|v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)##AF218000|PYCR1|5831|pyrroline-5-carboxylate reductase 1##NM_006907|PYCR1|5831|pyrroline-5-carboxylate reductase 1##NM_153824|PYCR1|5831|pyrroline-5-carboxylate reductase 1##AK297627|PYCR1|5831|pyrroline-5-carboxylate reductase 1##BC071842|PYCR1|5831|pyrroline-5-carboxylate reductase 1##AK225879|PYCR1|5831|pyrroline-5-carboxylate reductase 1##BC029306|MYADML2|255275|myeloid-associated differentiation marker-like 2##NM_001145113|MYADML2|255275|myeloid-associated differentiation marker-like 2##NM_178493|NOTUM|147111|notum pectinacetylesterase homolog (Drosophila)##BC060882|NOTUM|147111|notum pectinacetylesterase homolog (Drosophila)	0.0	
chr18	72531794	72531975	reg1033118.p1	4.007	+	NM_001146189 NM_001146190 NM_017757	-188966	+	TSC_hg19_v1_chr18_+_72265126 AK056288	-266753	+	TSC_hg19_v1_chr18_-_72265072 BC036588	-266824	-	TSC_hg19_v1_chr18_-_72920993 CU687330 CU689738	389117	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	389228	-	BC018081 NM_175907 TSC_hg19_v1_chr18_-_72921324	389421	-	NM_001146189|ZNF407|55628|zinc finger protein 407##NM_001146190|ZNF407|55628|zinc finger protein 407##NM_017757|ZNF407|55628|zinc finger protein 407##AK056288|ZNF407|55628|zinc finger protein 407##BC036588|LOC400657|400657|uncharacterized LOC400657##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	0.173737	
chr2	136874034	136874163	reg1032451.p1	4.007	+	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-300	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-130882	-	TSC_hg19_v1_chr2_-_136743143 AK222476 BC000629 AK290607 J05032	-130969	-	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	1578	-	TSC_hg19_v1_chr2_+_137523114 AK299929	649018	+	NM_001080427	874363	+	NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK222476|DARS|1615|aspartyl-tRNA synthetase##BC000629|DARS|1615|aspartyl-tRNA synthetase##AK290607|DARS|1615|aspartyl-tRNA synthetase##J05032|DARS|1615|aspartyl-tRNA synthetase##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B	0.011105	
chr8	90996314	90996418	reg1006433.p1	4.007	+	BC031054 NM_001126111 TSC_hg19_v1_chr8_+_90914816	-81572	+	AF061326 NM_004337	-82271	+	AY524045 TSC_hg19_v1_chr8_+_90770252 AB587542 CU678766 AF078530 AY562996	-226082	+	TSC_hg19_v1_chr8_-_90996804 AB528582 BC143065 BC143066 BC108650 BC016762 BC005293 AF058696 AF051334 AK223256 BC146797 BC136802 BC136803 BC144413	466	-	TSC_hg19_v1_chr8_-_90996896 AK001017 AK289848 BC071590 BC040519 BX640816 NM_002485 AK312410	538	-	NM_001359 BC105080 BC105082 BC143669 TSC_hg19_v1_chr8_+_91013704 AK300069 L26050	17283	+	BC031054|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_001126111|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##AF061326|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##NM_004337|OSGIN2|734|oxidative stress induced growth inhibitor family member 2##AY524045|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF078530|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY562996|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC143065|NBN|4683|nibrin##BC143066|NBN|4683|nibrin##BC108650|NBN|4683|nibrin##BC016762|NBN|4683|nibrin##BC005293|NBN|4683|nibrin##AF058696|NBN|4683|nibrin##AF051334|NBN|4683|nibrin##AK223256|NBN|4683|nibrin##BC146797|NBN|4683|nibrin##BC136802|NBN|4683|nibrin##BC136803|NBN|4683|nibrin##BC144413|NBN|4683|nibrin##AK001017|NBN|4683|nibrin##AK289848|NBN|4683|nibrin##BC071590|NBN|4683|nibrin##BC040519|NBN|4683|nibrin##BX640816|NBN|4683|nibrin##NM_002485|NBN|4683|nibrin##AK312410|NBN|4683|nibrin##NM_001359|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105080|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC105082|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##BC143669|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##AK300069|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial##L26050|DECR1|1666|2,4-dienoyl CoA reductase 1, mitochondrial	0.0	
chr9	134497545	134497726	reg1039334.p2	4.007	+	AK057848 TSC_hg19_v1_chr9_-_134406625 BC091495 BC015547 AK022317 NM_001135954 NM_031432	-90985	-	TSC_hg19_v1_chr9_-_134406578 AF254133 CR457281 CU677347 AF237290 AF125106 AK295471 AK307475	-91088	-	AK315218 TSC_hg19_v1_chr9_+_134378402 AK293529 BC022877	-119200	+	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	87567	-	D21239 NM_005312	115289	-	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	117655	-	AK057848|UCK1|83549|uridine-cytidine kinase 1##BC091495|UCK1|83549|uridine-cytidine kinase 1##BC015547|UCK1|83549|uridine-cytidine kinase 1##AK022317|UCK1|83549|uridine-cytidine kinase 1##NM_001135954|UCK1|83549|uridine-cytidine kinase 1##NM_031432|UCK1|83549|uridine-cytidine kinase 1##AF254133|UCK1|83549|uridine-cytidine kinase 1##CR457281|UCK1|83549|uridine-cytidine kinase 1##AF237290|UCK1|83549|uridine-cytidine kinase 1##AF125106|UCK1|83549|uridine-cytidine kinase 1##AK295471|UCK1|83549|uridine-cytidine kinase 1##AK307475|UCK1|83549|uridine-cytidine kinase 1##AK315218|POMT1|10585|protein-O-mannosyltransferase 1##AK293529|POMT1|10585|protein-O-mannosyltransferase 1##BC022877|POMT1|10585|protein-O-mannosyltransferase 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1	0.029672	
chr1	175450982	175451054	reg1003560.p2	4.006	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	-288988	-	AK127044 NM_022093	-414025	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-458447	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	261692	-	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	725147	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	725300	-	D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2	0.964126	CTCF.p2:-1:0.964
chr11	82798198	82798319	reg1039163.p1	4.006	+	BC031316 TSC_hg19_v1_chr11_+_82783118	-15140	+	BC014213 NM_014488 TSC_hg19_v1_chr11_-_82782897 BX641138	-15361	-	AK312323 TSC_hg19_v1_chr11_-_82782872	-15385	-	NM_015885 TSC_hg19_v1_chr11_+_82868196 AK302606 AF046935 AK025103 AB020631 BC146778 BC110432 BC065384	70147	+	AK311356 TSC_hg19_v1_chr11_-_82904700	106444	-	TSC_hg19_v1_chr11_+_82904780 DQ508934 BC045621 AK310765 EF041819	106576	+	BC031316|LOC100506233|100506233|uncharacterized LOC100506233##BC014213|RAB30|27314|RAB30, member RAS oncogene family##NM_014488|RAB30|27314|RAB30, member RAS oncogene family##BX641138|RAB30|27314|RAB30, member RAS oncogene family##AK312323|RAB30|27314|RAB30, member RAS oncogene family##NM_015885|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK302606|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AF046935|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK025103|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AB020631|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC146778|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC110432|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC065384|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK311356|DKFZp547G183|55525|uncharacterized LOC55525##DQ508934|ANKRD42|338699|ankyrin repeat domain 42##BC045621|ANKRD42|338699|ankyrin repeat domain 42##AK310765|ANKRD42|338699|ankyrin repeat domain 42##EF041819|ANKRD42|338699|ankyrin repeat domain 42	0.250177	CTCF.p2:4:0.250
chr1	39649504	39649628	reg1034259.p1	4.006	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-102478	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	-157558	+	TSC_hg19_v1_chr1_+_39456956 NM_001136275 NM_024595 AK022728 AK092624 AX747634 AK124799 AK126262 AK223276 AK298890 AK303098 BC001498 BC119745 BC119746 AY326465	-192504	+	NM_015038	225609	+	TSC_hg19_v1_chr1_+_39922264 AK023821	272753	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	307779	+	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_001136275|AKIRIN1|79647|akirin 1##NM_024595|AKIRIN1|79647|akirin 1##AK022728|AKIRIN1|79647|akirin 1##AK092624|AKIRIN1|79647|akirin 1##AK124799|AKIRIN1|79647|akirin 1##AK126262|AKIRIN1|79647|akirin 1##AK223276|AKIRIN1|79647|akirin 1##AK298890|AKIRIN1|79647|akirin 1##AK303098|AKIRIN1|79647|akirin 1##BC001498|AKIRIN1|79647|akirin 1##BC119745|AKIRIN1|79647|akirin 1##BC119746|AKIRIN1|79647|akirin 1##AY326465|AKIRIN1|79647|akirin 1##NM_015038|KIAA0754|643314|KIAA0754##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a	0.279772	CTCF.p2:-38:0.280
chr14	61905924	61906094	reg1032622.p1	4.006	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-117482	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-157487	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-157815	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	256181	+	FJ790247 NM_001243084	258330	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	323110	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.0	
chr16	12895692	12895818	reg1031052.p2	4.006	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-825182	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-836671	+	NM_001130007	-885237	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	1896	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	1964	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	99713	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr2	208125119	208125240	reg1036169.p2	4.006	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-93554	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-94523	-	BC112076 BC112078 NM_173077 AJ422118	-320879	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	269464	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	269542	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	269602	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.039727	
chr2	233990121	233990204	reg1025440.p2	4.006	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-65046	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-65103	+	BC069151 BC107053 NM_005383	-92781	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	170104	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	170161	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	170195	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.017858	
chr2	69066518	69066620	reg1034676.p1	4.006	+	BC032222 NM_001166276 NM_014882 AK311669 TSC_hg19_v1_chr2_+_69002068 BC039591 AK297157 AK298669 D29642	-64544	+	NM_001007231 NM_001166277 AK297056 TSC_hg19_v1_chr2_+_68962066 AK310742 AK290396	-104496	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	-193616	+	BC069080 BC101734 BC105063 AF101441 NM_014482	32006	-	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	113487	-	AB039886 AJ966789 NM_019617 AB590637 AY139184 AK098489 AY456961 BC059778 AY359050	135173	+	BC032222|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166276|ARHGAP25|9938|Rho GTPase activating protein 25##NM_014882|ARHGAP25|9938|Rho GTPase activating protein 25##AK311669|ARHGAP25|9938|Rho GTPase activating protein 25##BC039591|ARHGAP25|9938|Rho GTPase activating protein 25##AK297157|ARHGAP25|9938|Rho GTPase activating protein 25##AK298669|ARHGAP25|9938|Rho GTPase activating protein 25##D29642|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25##AK297056|ARHGAP25|9938|Rho GTPase activating protein 25##AK310742|ARHGAP25|9938|Rho GTPase activating protein 25##AK290396|ARHGAP25|9938|Rho GTPase activating protein 25##AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1##BC069080|BMP10|27302|bone morphogenetic protein 10##BC101734|BMP10|27302|bone morphogenetic protein 10##BC105063|BMP10|27302|bone morphogenetic protein 10##AF101441|BMP10|27302|bone morphogenetic protein 10##NM_014482|BMP10|27302|bone morphogenetic protein 10##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2##AB039886|GKN1|56287|gastrokine 1##AJ966789|GKN1|56287|gastrokine 1##NM_019617|GKN1|56287|gastrokine 1##AY139184|GKN1|56287|gastrokine 1##AK098489|GKN1|56287|gastrokine 1##AY456961|GKN1|56287|gastrokine 1##BC059778|GKN1|56287|gastrokine 1##AY359050|GKN1|56287|gastrokine 1	0.16455	
chr6	105344971	105345082	reg1034284.p1	4.006	+	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	-37238	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	-37264	-	TSC_hg19_v1_chr6_-_105307736 AK291760	-37301	-	AK131411 DQ127228 NM_001004317	59896	+	BC034425 NM_147147	239194	-	NM_007073 AF204172 TSC_hg19_v1_chr6_-_105584689	239600	-	AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK131411|LIN28B|389421|lin-28 homolog B (C. elegans)##DQ127228|LIN28B|389421|lin-28 homolog B (C. elegans)##NM_001004317|LIN28B|389421|lin-28 homolog B (C. elegans)##BC034425|BVES|11149|blood vessel epicardial substance##NM_147147|BVES|11149|blood vessel epicardial substance##NM_007073|BVES|11149|blood vessel epicardial substance##AF204172|BVES|11149|blood vessel epicardial substance	0.961762	CTCF.p2:-15:0.962
chr6	97501738	97501850	reg1013212.p1	4.006	+	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	-129171	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-156030	-	TSC_hg19_v1_chr6_-_97345751 BC018802 AF161474	-156042	-	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	229296	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	1780786	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	1780878	+	NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC018802|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF161474|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2	0.898821	
chr9	74383383	74383488	reg1013371.p1	4.006	+	AL136545 TSC_hg19_v1_chr9_-_74061901	-321552	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	-646899	-	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	-899475	-	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	143	-	AF151825 TSC_hg19_v1_chr9_-_74525994	142490	-	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	142721	-	AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2##AF151825|FAM108B1|51104|family with sequence similarity 108, member B1##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1	0.0	
chr10	25189806	25189872	reg1040482.p1	4.005	+	AF480466 NM_020824 TSC_hg19_v1_chr10_-_25012632	-177233	-	AK307604 TSC_hg19_v1_chr10_-_25012174	-177666	-	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	-434370	+	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	51693	-	CU693144 DQ892076 DQ895269 BC064597 AK095021 NM_145010 AY454125 AK292495 BC026165	115135	-	NM_024838 TSC_hg19_v1_chr10_+_25305540 AK125249 BC035132 BX647989	115711	+	AF480466|ARHGAP21|57584|Rho GTPase activating protein 21##NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21##BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##DQ892076|ENKUR|219670|enkurin, TRPC channel interacting protein##DQ895269|ENKUR|219670|enkurin, TRPC channel interacting protein##AK095021|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_145010|ENKUR|219670|enkurin, TRPC channel interacting protein##AY454125|ENKUR|219670|enkurin, TRPC channel interacting protein##AK292495|ENKUR|219670|enkurin, TRPC channel interacting protein##BC026165|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_024838|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AK125249|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BC035132|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BX647989|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)	0.0	
chr1	181100508	181100689	reg1035708.p1	4.005	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-42733	+	NM_016545	-42961	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-97448	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	352102	+	BC137223 BC137224 AK128654 NM_001009992	930199	-	TSC_hg19_v1_chr1_-_182354649 AK301600	1254084	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.0	
chr12	4300999	4301118	reg1031113.p1	4.005	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-318558	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-438676	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-438790	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	81986	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	129333	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	187742	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.0	
chr15	74695456	74695605	reg1028664.p2	4.005	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-35527	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-36995	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-84625	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	30499	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	30782	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	57917	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.0	
chr17_ctg5_hap1	328805	328895	reg1030366.p1	4.005	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999163	CTCF.p2:10:0.999
chr18	46327830	46328007	reg1032282.p1	4.005	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-262145	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-392209	-	AM988836 AK296709 NM_001039360 EF120357	-664219	-	AK131394 NM_001190823	141229	-	AK301535 NM_001190822	147784	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	148849	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.0	
chr21	47035529	47035658	reg1017811.p2	4.005	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-73261	-	AK303168 NM_001205207	-81059	-	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	-160175	+	TSC_hg19_v1_chr21_+_47063638 AK310131	28036	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	234295	+	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	366092	+	U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1##AK310131|PCBP3|54039|poly(rC) binding protein 3##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1	0.0	
chr2	65615242	65615423	reg1038192.p1	4.005	+	TSC_hg19_v1_chr2_-_65593867 NM_001128210	-21434	-	TSC_hg19_v1_chr2_-_65593766 AK299079	-21559	-	NM_001005386 NM_005722 TSC_hg19_v1_chr2_+_65454944 AK295157 AK301634 BC014546 BX649080 AF006082 AK315205 AB462954 EU831978 EU832071	-160397	+	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	43880	-	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	44344	-	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	48505	+	NM_001128210|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK299079|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_001005386|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##NM_005722|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK295157|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK301634|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BC014546|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##BX649080|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AF006082|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK315205|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU831978|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##EU832071|ACTR2|10097|ARP2 actin-related protein 2 homolog (yeast)##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein	0.0	
chr3	179066267	179066351	reg1033679.p1	4.005	+	BC040557 NM_033540 TSC_hg19_v1_chr3_+_179065522 BC020661 AB043589 AK000700 AK314306	-795	+	AB097862 AF003924 NM_016331	-24759	+	TSC_hg19_v1_chr3_+_179040818 BC026181	-25443	+	BC000873 TSC_hg19_v1_chr3_-_179169227 AK297174	102935	-	TSC_hg19_v1_chr3_-_179169361 AK001890 NM_021629	103056	-	TSC_hg19_v1_chr3_+_179280713 AB060168 NM_004301 NM_177989 NM_178042 AK098691 BC000949 AL136608 BC036371	214400	+	BC040557|MFN1|55669|mitofusin 1##NM_033540|MFN1|55669|mitofusin 1##BC020661|MFN1|55669|mitofusin 1##AB043589|MFN1|55669|mitofusin 1##AK000700|MFN1|55669|mitofusin 1##AK314306|MFN1|55669|mitofusin 1##AB097862|ZNF639|51193|zinc finger protein 639##AF003924|ZNF639|51193|zinc finger protein 639##NM_016331|ZNF639|51193|zinc finger protein 639##BC026181|ZNF639|51193|zinc finger protein 639##BC000873|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AK297174|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AK001890|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##NM_021629|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AB060168|ACTL6A|86|actin-like 6A##NM_004301|ACTL6A|86|actin-like 6A##NM_177989|ACTL6A|86|actin-like 6A##NM_178042|ACTL6A|86|actin-like 6A##AK098691|ACTL6A|86|actin-like 6A##BC000949|ACTL6A|86|actin-like 6A##AL136608|ACTL6A|86|actin-like 6A##BC036371|ACTL6A|86|actin-like 6A	0.0	
chr9	66142827	66142903	reg1031650.p1	4.005	+	BC040528 NM_001113541 NM_015667	-633256	-	TSC_hg19_v1_chr9_+_45441926 BC006438	-20700939	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-22458022	+	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	314436	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	315631	-	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	351331	-	BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##AB593083|LOC100132249|100132249|uncharacterized LOC100132249	0.0	
chr11	72533626	72533771	reg1035243.p2	4.004	+	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-8216	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-8293	+	AB209473 AK095668 BC035482 BC007919 BC014033 AK310301 AK315255 NM_006645	-29002	-	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	319351	-	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	395646	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	395748	+	BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK095668|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC035482|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC007919|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##BC014033|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AK315255|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##NM_006645|STARD10|10809|StAR-related lipid transfer (START) domain containing 10##AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.0	
chr1	173475717	173475843	reg1030067.p1	4.004	+	TSC_hg19_v1_chr1_+_173446484 BC035857 NM_004905 AK289352 BC025421 D14662 BC053550 CU690218 AJ844621	-29253	+	TSC_hg19_v1_chr1_+_173446473 AK300680	-29307	+	TSC_hg19_v1_chr1_-_173446300 AK127238	-29472	-	BC042592 AK302731 AK128104 NM_178527	96425	-	NM_001195190	128880	+	BC094694 TSC_hg19_v1_chr1_-_173638991 AK127170 BC126353 BC126355 NM_198493	163206	-	BC035857|PRDX6|9588|peroxiredoxin 6##NM_004905|PRDX6|9588|peroxiredoxin 6##AK289352|PRDX6|9588|peroxiredoxin 6##BC025421|PRDX6|9588|peroxiredoxin 6##D14662|PRDX6|9588|peroxiredoxin 6##BC053550|PRDX6|9588|peroxiredoxin 6##AJ844621|PRDX6|9588|peroxiredoxin 6##AK300680|PRDX6|9588|peroxiredoxin 6##AK127238|LOC100506023|100506023|uncharacterized LOC100506023##BC042592|SLC9A11|284525|solute carrier family 9, member 11##AK302731|SLC9A11|284525|solute carrier family 9, member 11##AK128104|SLC9A11|284525|solute carrier family 9, member 11##NM_178527|SLC9A11|284525|solute carrier family 9, member 11##NM_001195190|LOC730159|730159|uncharacterized LOC730159##AK127170|ANKRD45|339416|ankyrin repeat domain 45##BC126353|ANKRD45|339416|ankyrin repeat domain 45##BC126355|ANKRD45|339416|ankyrin repeat domain 45##NM_198493|ANKRD45|339416|ankyrin repeat domain 45	0.0	
chr14	38372943	38373029	reg1031870.p1	4.004	+	TSC_hg19_v1_chr14_-_38064444 NM_004496	-308522	-	TSC_hg19_v1_chr14_-_38064316 AK313785	-308670	-	AB463645 CU689794 AM392863 AM393239 AM393310 AM393369 TSC_hg19_v1_chr14_-_38064234 BC033890	-308780	-	TSC_hg19_v1_chr14_+_38677186 BX248780 NM_001049	304208	+	AK290868 TSC_hg19_v1_chr14_+_38678303 BC035618	305314	+	AB384936 DQ893328 DQ896644 TSC_hg19_v1_chr14_+_38678642	305633	+	NM_004496|FOXA1|3169|forkhead box A1##AK313785|FOXA1|3169|forkhead box A1##AM392863|FOXA1|3169|forkhead box A1##AM393239|FOXA1|3169|forkhead box A1##AM393310|FOXA1|3169|forkhead box A1##AM393369|FOXA1|3169|forkhead box A1##BC033890|FOXA1|3169|forkhead box A1##BX248780|SSTR1|6751|somatostatin receptor 1##NM_001049|SSTR1|6751|somatostatin receptor 1##AK290868|SSTR1|6751|somatostatin receptor 1##BC035618|SSTR1|6751|somatostatin receptor 1##DQ893328|SSTR1|6751|somatostatin receptor 1##DQ896644|SSTR1|6751|somatostatin receptor 1	0.015337	
chr16	1458407	1458587	reg1037391.p2	4.004	+	TSC_hg19_v1_chr16_-_1429645 BC000150 AK027013 NM_001193389 NM_023076	-28832	-	TSC_hg19_v1_chr16_+_1401951 BC014592 DQ890827 DQ893981 AF302786 CU677055 AY203933 BC131525	-56477	+	NM_032520 TSC_hg19_v1_chr16_+_1401931 AK312067	-56581	+	TSC_hg19_v1_chr16_-_1464697 AM944365 BC011924 AK124977 NM_001037125 NM_001193388	6181	-	TSC_hg19_v1_chr16_-_1470746 BC073941 BC063715 BC023590 BC092497	12238	-	NM_001010878 AB463766	20847	-	BC000150|UNKL|64718|unkempt homolog (Drosophila)-like##AK027013|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001193389|UNKL|64718|unkempt homolog (Drosophila)-like##NM_023076|UNKL|64718|unkempt homolog (Drosophila)-like##BC014592|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##DQ890827|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##DQ893981|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AF302786|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AY203933|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##BC131525|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##NM_032520|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AK312067|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AM944365|UNKL|64718|unkempt homolog (Drosophila)-like##BC011924|UNKL|64718|unkempt homolog (Drosophila)-like##AK124977|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001037125|UNKL|64718|unkempt homolog (Drosophila)-like##NM_001193388|UNKL|64718|unkempt homolog (Drosophila)-like##BC023590|C16orf91|283951|chromosome 16 open reading frame 91##BC092497|C16orf91|283951|chromosome 16 open reading frame 91##NM_001010878|C16orf91|283951|chromosome 16 open reading frame 91	0.0	
chr16	1629348	1629455	reg1034112.p1	4.004	+	BC105785 AY358178 NM_024600	-45206	+	TSC_hg19_v1_chr16_+_1583666 BC020425	-45705	+	AK024551 AY676494 TSC_hg19_v1_chr16_+_1583663	-45741	+	TSC_hg19_v1_chr16_-_1660720 AB011162 AK299035 AK299115	31291	-	TSC_hg19_v1_chr16_-_1662054 NM_014714	32637	-	NM_020825	35239	+	BC105785|TMEM204|79652|transmembrane protein 204##AY358178|TMEM204|79652|transmembrane protein 204##NM_024600|TMEM204|79652|transmembrane protein 204##BC020425|TMEM204|79652|transmembrane protein 204##AK024551|TMEM204|79652|transmembrane protein 204##AY676494|TMEM204|79652|transmembrane protein 204##AB011162|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##AK299035|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##AK299115|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##NM_014714|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##NM_020825|CRAMP1L|57585|Crm, cramped-like (Drosophila)	0.756981	CTCF.p2:68:0.744
chr17	27507563	27507649	reg1006514.p2	4.004	+	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	-256	-	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	-40195	-	AK054958 NM_004740	-104980	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	66271	+	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	113504	-	TSC_hg19_v1_chr17_-_27621167 AK293075 NM_020772	113559	-	CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2	0.0	
chr17	47269884	47269997	reg1035827.p2	4.004	+	AF510036 AJ517770 NM_153446 BC113675 BC113677 HQ258321 HQ258467	-59583	+	TSC_hg19_v1_chr17_+_47210130 NM_001159387 AJ517771	-59840	+	AK302876 NM_001159388	-60119	+	BC008663 NM_031498 AK312839 NM_001198755 NM_001198756	16811	-	AB037886 NM_001135186 NM_016428	17648	+	NM_001198754	17995	-	AF510036|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517770|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_153446|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113675|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113677|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258321|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258467|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159387|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517771|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AK302876|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159388|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC008663|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##NM_031498|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AK312839|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##NM_001198755|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##NM_001198756|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AB037886|ABI3|51225|ABI family, member 3##NM_001135186|ABI3|51225|ABI family, member 3##NM_016428|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2	0.0	
chr18	20811511	20811668	reg1033940.p2	4.004	+	BC037218 NM_138375	-75801	+	EF028204 NM_001100619	-95863	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-297774	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	206282	-	AK057292 NM_003831	221197	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	221657	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.0	
chr19	14126442	14126549	reg1034206.p1	4.004	+	BC049826 TSC_hg19_v1_chr19_-_14117133 AK309824 NM_002918	-9366	-	TSC_hg19_v1_chr19_-_14116878 X58964	-9581	-	AK027100 AK298489 NM_001146254 NM_001146255	-62298	-	BC140935 AB076563 AF447451 BC110069 NM_080864	12492	+	NM_004843	15766	+	TSC_hg19_v1_chr19_+_14142542 AF053004 AF106912	16019	+	BC049826|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##AK309824|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##NM_002918|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##X58964|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##AK027100|PODNL1|79883|podocan-like 1##AK298489|PODNL1|79883|podocan-like 1##NM_001146254|PODNL1|79883|podocan-like 1##NM_001146255|PODNL1|79883|podocan-like 1##BC140935|RLN3|117579|relaxin 3##AB076563|RLN3|117579|relaxin 3##AF447451|RLN3|117579|relaxin 3##BC110069|RLN3|117579|relaxin 3##NM_080864|RLN3|117579|relaxin 3##NM_004843|IL27RA|9466|interleukin 27 receptor, alpha##AF053004|IL27RA|9466|interleukin 27 receptor, alpha##AF106912|IL27RA|9466|interleukin 27 receptor, alpha	0.0	
chr3	127466306	127466408	reg1040222.p1	4.004	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-74540	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-118325	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-149073	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	75073	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	75785	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	167961	+	NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.224869	CTCF.p2:-77:0.225
chr3	52334083	52334202	reg1033526.p1	4.004	+	TSC_hg19_v1_chr3_+_52321862 BC042151 BC021896	-12268	+	AF448855 AY172690 BC036862 NM_001144951 NM_145262 TSC_hg19_v1_chr3_+_52321852 AK074215	-12299	+	TSC_hg19_v1_chr3_-_52312656 NM_025222	-21486	-	AB037831 AB290163 NM_015512	16192	+	CU674778 D88812 DQ892545 DQ895756 AF045581 TSC_hg19_v1_chr3_-_52443999 BC001596 NM_004656	109812	-	TSC_hg19_v1_chr3_-_52444016 D87462	109874	-	BC042151|GLYCTK|132158|glycerate kinase##BC021896|GLYCTK|132158|glycerate kinase##AF448855|GLYCTK|132158|glycerate kinase##AY172690|GLYCTK|132158|glycerate kinase##BC036862|GLYCTK|132158|glycerate kinase##NM_001144951|GLYCTK|132158|glycerate kinase##NM_145262|GLYCTK|132158|glycerate kinase##AK074215|GLYCTK|132158|glycerate kinase##NM_025222|WDR82|80335|WD repeat domain 82##AB037831|DNAH1|25981|dynein, axonemal, heavy chain 1##AB290163|DNAH1|25981|dynein, axonemal, heavy chain 1##NM_015512|DNAH1|25981|dynein, axonemal, heavy chain 1##D88812|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##DQ892545|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##DQ895756|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##AF045581|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##BC001596|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##NM_004656|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##D87462|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)	0.01107	
chr4	98642032	98642142	reg1018633.p1	4.004	+	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	-1880829	+	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	-2171711	-	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	-2171908	-	CU691442 BC036870 NM_174952	422258	-	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	540507	+	TSC_hg19_v1_chr4_-_99579781 BC009704 AF065389 AK315723 NM_005723	937672	-	NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC009704|TSPAN5|10098|tetraspanin 5##AF065389|TSPAN5|10098|tetraspanin 5##AK315723|TSPAN5|10098|tetraspanin 5##NM_005723|TSPAN5|10098|tetraspanin 5	0.0	
chr6	106545926	106546057	reg1030164.p2	4.004	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	-11756	+	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	-11795	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-694996	-	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	813	+	BC002699 TSC_hg19_v1_chr6_-_106773313	227317	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	227541	-	AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	0.0	
chr12	125403923	125404038	reg1033361.p1	4.003	+	NM_021009	-4394	-	AY732488 AY819759 BC008955 BC080583 AB209782 BC000449 AK056939 AK098827 AK129749 AK291539 BC039193 BC093445 AB009010 TSC_hg19_v1_chr12_-_125399197 AK026846	-4807	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	-55507	-	TSC_hg19_v1_chr12_-_125473644 BC037964 NM_032656	69664	-	TSC_hg19_v1_chr12_+_125478217 NM_080626 BC034525	74210	+	TSC_hg19_v1_chr12_+_125478249 AF284094	74280	+	NM_021009|UBC|7316|ubiquitin C##AY732488|UBC|7316|ubiquitin C##AY819759|UBC|7316|ubiquitin C##BC008955|UBC|7316|ubiquitin C##BC080583|UBC|7316|ubiquitin C##AB209782|UBC|7316|ubiquitin C##BC000449|UBC|7316|ubiquitin C##AK056939|UBC|7316|ubiquitin C##AK098827|UBC|7316|ubiquitin C##AK129749|UBC|7316|ubiquitin C##AK291539|UBC|7316|ubiquitin C##BC039193|UBC|7316|ubiquitin C##BC093445|UBC|7316|ubiquitin C##AB009010|UBC|7316|ubiquitin C##AK026846|UBC|7316|ubiquitin C##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1##BC037964|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37##NM_032656|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37##NM_080626|BRI3BP|140707|BRI3 binding protein##BC034525|BRI3BP|140707|BRI3 binding protein##AF284094|BRI3BP|140707|BRI3 binding protein	0.0	
chr1	228368104	228368204	reg1032173.p1	4.003	+	TSC_hg19_v1_chr1_+_228353834 AK022796	-14293	+	NM_001010867 TSC_hg19_v1_chr1_+_228353504 BC028052	-14682	+	BC089439 NM_020435	-30740	+	TSC_hg19_v1_chr1_+_228395744 NM_001098623 NM_052843	27646	+	TSC_hg19_v1_chr1_-_228401360 BC027909 AK056556	33205	-	TSC_hg19_v1_chr1_-_228463735 AK294019	95593	-	AK022796|IBA57|200205|IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)##NM_001010867|IBA57|200205|IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)##BC028052|IBA57|200205|IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)##BC089439|GJC2|57165|gap junction protein, gamma 2, 47kDa##NM_020435|GJC2|57165|gap junction protein, gamma 2, 47kDa##NM_001098623|OBSCN|84033|obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF##NM_052843|OBSCN|84033|obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF##BC027909|C1orf145|574407|chromosome 1 open reading frame 145##AK056556|C1orf145|574407|chromosome 1 open reading frame 145	0.0	
chr13	22635534	22635661	reg1026657.p1	4.003	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-390449	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-457237	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-457288	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	1119518	+	TSC_hg19_v1_chr13_-_23949652 AK125458	1314053	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	1372243	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.0	
chr19	50398659	50398761	reg1026960.p1	4.003	+	TSC_hg19_v1_chr19_+_50381392 AK090606 AX746531	-17252	+	NM_001168222 NM_024682 TSC_hg19_v1_chr19_+_50380945 BC003516 AK022230 AK300007 AK309412 AB449903 AB590884 CU678472	-17861	+	BC016043 BC007416 AK226004 BC051844 TSC_hg19_v1_chr19_-_50380601 BC015562 NM_032375 AK123687 NM_001098633 NM_001098632	-18163	-	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	1443	-	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	14392	-	NM_012068 AK290592	33278	+	AK090606|TBC1D17|79735|TBC1 domain family, member 17##NM_001168222|TBC1D17|79735|TBC1 domain family, member 17##NM_024682|TBC1D17|79735|TBC1 domain family, member 17##BC003516|TBC1D17|79735|TBC1 domain family, member 17##AK022230|TBC1D17|79735|TBC1 domain family, member 17##AK300007|TBC1D17|79735|TBC1 domain family, member 17##AK309412|TBC1D17|79735|TBC1 domain family, member 17##AB449903|TBC1D17|79735|TBC1 domain family, member 17##BC016043|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC007416|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##AK226004|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC051844|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC015562|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_032375|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##AK123687|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_001098633|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_001098632|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5	0.0	
chr20	30145279	30145406	reg1035619.p1	4.003	+	TSC_hg19_v1_chr20_+_30135200 BC053868	-10108	+	TSC_hg19_v1_chr20_+_30102316 AJ420895 DQ896206 CU687568 AF515663	-43009	+	AF172086 BC062595 TSC_hg19_v1_chr20_+_30102287 AF483215 AJ345029 AK074686	-43061	+	TSC_hg19_v1_chr20_+_30193091 NM_002165 NM_181353 AK313786 BC012420 BC000613 S78986 X77956 AK291152 D13889 D13890 S78825 AB463776 CU680316 DQ891293 DQ893342 DQ894477 DQ896657 EU176458 EU176468 EU176808 BT007443	47794	+	AF257180 NM_032609 BC057779	80360	+	BC032024 TSC_hg19_v1_chr20_-_30288101	142755	-	AJ420895|HM13|81502|histocompatibility (minor) 13##DQ896206|HM13|81502|histocompatibility (minor) 13##AF515663|HM13|81502|histocompatibility (minor) 13##AF172086|HM13|81502|histocompatibility (minor) 13##BC062595|HM13|81502|histocompatibility (minor) 13##AF483215|HM13|81502|histocompatibility (minor) 13##AJ345029|HM13|81502|histocompatibility (minor) 13##AK074686|HM13|81502|histocompatibility (minor) 13##NM_002165|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##NM_181353|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK313786|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC012420|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC000613|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78986|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##X77956|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK291152|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13889|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13890|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78825|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ891293|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ893342|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ894477|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ896657|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176458|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176468|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176808|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BT007443|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AF257180|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_032609|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##BC057779|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)	0.997387	CTCF.p2:11:0.997
chr3	9120677	9120823	reg1025374.p3	4.003	+	AB528316 DQ891197 DQ894380 TSC_hg19_v1_chr3_-_9005128 AY004333 BC001302 AK222771 AF169796 AK023075 NM_020165	-115620	-	TSC_hg19_v1_chr3_-_8811300 NM_000916	-309466	-	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	-309664	-	AB007871 AB384477 AK094355 AF427144 TSC_hg19_v1_chr3_-_9290871 AF464189	169994	-	TSC_hg19_v1_chr3_-_9291320 NM_001033117 NM_014850 BC140004 AK054831	170568	-	TSC_hg19_v1_chr3_+_9404750 NM_001114092 NM_015453 AK023263 BC001622 AK001680 BC010421	284025	+	DQ891197|RAD18|56852|RAD18 homolog (S. cerevisiae)##DQ894380|RAD18|56852|RAD18 homolog (S. cerevisiae)##AY004333|RAD18|56852|RAD18 homolog (S. cerevisiae)##BC001302|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK222771|RAD18|56852|RAD18 homolog (S. cerevisiae)##AF169796|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK023075|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_020165|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_000916|OXTR|5021|oxytocin receptor##X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor##AB007871|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK094355|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF427144|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF464189|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_001114092|THUMPD3|25917|THUMP domain containing 3##NM_015453|THUMPD3|25917|THUMP domain containing 3##AK023263|THUMPD3|25917|THUMP domain containing 3##BC001622|THUMPD3|25917|THUMP domain containing 3##AK001680|THUMPD3|25917|THUMP domain containing 3##BC010421|THUMPD3|25917|THUMP domain containing 3	0.708038	CTCF.p2:-31:0.708
chr6	43921617	43921735	reg1035730.p1	4.003	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-182806	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-183142	+	TSC_hg19_v1_chr6_+_43738284 AF022375	-183429	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	46698	+	CR627460 TSC_hg19_v1_chr6_+_44094741	173022	+	TSC_hg19_v1_chr6_-_44095161 AK312086	173484	-	M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##AF022375|VEGFA|7422|vascular endothelial growth factor A##BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14	0.97352	CTCF.p2:-9:0.974
chr8	134461637	134461818	reg1001285.p1	4.003	+	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-152230	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-258397	+	NM_001045556 NM_001045557	-346418	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	122370	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1247067	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1263352	-	AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr9	114757006	114757186	reg1026684.p1	4.003	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-97629	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-97982	+	AL833535 NM_173521	-211321	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	180424	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	338191	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	338753	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chrX	78932107	78932180	reg1036203.p1	4.003	+	AK313154 NM_001171581 NM_004867	-309116	-	CR456875 CU691874 EU446983 AY359051 AB209310 BC040437 BC010511 TSC_hg19_v1_chrX_-_78622829 AK223327 AK303238 AF038953 BC034485	-309360	-	AF345567 BC104922 BC104924 NM_032553	-505675	+	AK097514 NM_001109878 NM_001109879	338111	+	BC014194 NM_016954 AY035371 AB527983 CU680824	345611	+	AK128147 NM_001170574	658859	+	AK313154|ITM2A|9452|integral membrane protein 2A##NM_001171581|ITM2A|9452|integral membrane protein 2A##NM_004867|ITM2A|9452|integral membrane protein 2A##CR456875|ITM2A|9452|integral membrane protein 2A##EU446983|ITM2A|9452|integral membrane protein 2A##AY359051|ITM2A|9452|integral membrane protein 2A##AB209310|ITM2A|9452|integral membrane protein 2A##BC040437|ITM2A|9452|integral membrane protein 2A##BC010511|ITM2A|9452|integral membrane protein 2A##AK223327|ITM2A|9452|integral membrane protein 2A##AK303238|ITM2A|9452|integral membrane protein 2A##AF038953|ITM2A|9452|integral membrane protein 2A##BC034485|ITM2A|9452|integral membrane protein 2A##AF345567|GPR174|84636|G protein-coupled receptor 174##BC104922|GPR174|84636|G protein-coupled receptor 174##BC104924|GPR174|84636|G protein-coupled receptor 174##NM_032553|GPR174|84636|G protein-coupled receptor 174##AK097514|TBX22|50945|T-box 22##NM_001109878|TBX22|50945|T-box 22##NM_001109879|TBX22|50945|T-box 22##BC014194|TBX22|50945|T-box 22##NM_016954|TBX22|50945|T-box 22##AY035371|TBX22|50945|T-box 22##AK128147|FAM46D|169966|family with sequence similarity 46, member D##NM_001170574|FAM46D|169966|family with sequence similarity 46, member D	0.0	
chr15	74890781	74890944	reg1028815.p2	4.002	+	AK302034 TSC_hg19_v1_chr15_+_74833575 BC045545 NM_006465 AF116846 AK298716 BC041792 AB208830 BC060824	-57302	+	TSC_hg19_v1_chr15_+_74753647 BC014373 AF085896	-137211	+	TSC_hg19_v1_chr15_-_74753521 BC030055 NM_032907 NM_201265	-137350	-	L29217 L29220 NM_003992	9850	+	AK091692 AX747131 NM_001130028	16472	+	AK293769 TSC_hg19_v1_chr15_+_74908195 BC019881 CR933693 AK291983 AK301689 BC002555 AK225680 BC006103	17359	+	AK302034|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##BC045545|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##NM_006465|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##AF116846|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##AK298716|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##BC041792|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##AB208830|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##BC060824|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##BC014373|LOC440288|440288|uncharacterized LOC440288##AF085896|LOC440288|440288|uncharacterized LOC440288##BC030055|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##NM_032907|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##NM_201265|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##L29217|CLK3|1198|CDC-like kinase 3##L29220|CLK3|1198|CDC-like kinase 3##NM_003992|CLK3|1198|CDC-like kinase 3##AK091692|CLK3|1198|CDC-like kinase 3##NM_001130028|CLK3|1198|CDC-like kinase 3##AK293769|CLK3|1198|CDC-like kinase 3##BC019881|CLK3|1198|CDC-like kinase 3##CR933693|CLK3|1198|CDC-like kinase 3##AK291983|CLK3|1198|CDC-like kinase 3##AK301689|CLK3|1198|CDC-like kinase 3##BC002555|CLK3|1198|CDC-like kinase 3##AK225680|CLK3|1198|CDC-like kinase 3##BC006103|CLK3|1198|CDC-like kinase 3	0.013777	
chr19	13172115	13172223	reg1001254.p1	4.002	+	HQ258405 TSC_hg19_v1_chr19_+_13135832 FJ861276 U07811	-36335	+	TSC_hg19_v1_chr19_+_13135745 L31881 BC117113 BC117115	-36409	+	TSC_hg19_v1_chr19_+_13135426 BX537794 AK295290	-36772	+	TSC_hg19_v1_chr19_+_13205957 BC036885	33821	+	TSC_hg19_v1_chr19_-_13213530 AK311530 M22637	41357	-	TSC_hg19_v1_chr19_-_13213673 BC002796	41528	-	HQ258405|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##FJ861276|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U07811|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC036885|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##M22637|LYL1|4066|lymphoblastic leukemia derived sequence 1##BC002796|LYL1|4066|lymphoblastic leukemia derived sequence 1	0.0	
chr20	50017133	50017313	reg1030943.p2	4.002	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	-377566	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-441855	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-442160	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	141916	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	142052	-	EU887574 EU887577 NM_001136021	161944	-	BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.0	
chr21	44834600	44834781	reg1030376.p1	4.002	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-245516	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-307006	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-307065	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	11299	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	12305	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	244672	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr5	89145974	89146077	reg1036235.p2	4.002	+	AL833268 AL833274 NM_001131005 NM_001193347	-946131	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-960761	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-960905	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	559514	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	624157	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	624553	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr8	120653743	120653857	reg1032631.p1	4.002	+	EU131011 DQ891628 DQ894819 D45421 L35594 AK315253 BC034961 TSC_hg19_v1_chr8_-_120651080 NM_001040092 NM_001130863 NM_006209	-2738	-	NM_002514 AK294289 AK312355 TSC_hg19_v1_chr8_+_120428685 AY082381 X96584 BC015028 CU677181 AB463923 DQ891179 DQ894361 CR457432	-225139	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	-433161	+	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	191277	-	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	214314	-	NM_022783 TSC_hg19_v1_chr8_+_120885965 AK315175 AK225168 AK297822 AL136678 AK225675 BC024746 AK022490 BC012040 AM392576 AM393333 AB527130 AK023916	232204	+	EU131011|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ891628|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##DQ894819|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##D45421|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##L35594|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##AK315253|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##BC034961|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001040092|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_001130863|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_006209|ENPP2|5168|ectonucleotide pyrophosphatase/phosphodiesterase 2##NM_002514|NOV|4856|nephroblastoma overexpressed gene##AK294289|NOV|4856|nephroblastoma overexpressed gene##AK312355|NOV|4856|nephroblastoma overexpressed gene##AY082381|NOV|4856|nephroblastoma overexpressed gene##X96584|NOV|4856|nephroblastoma overexpressed gene##BC015028|NOV|4856|nephroblastoma overexpressed gene##DQ891179|NOV|4856|nephroblastoma overexpressed gene##DQ894361|NOV|4856|nephroblastoma overexpressed gene##CR457432|NOV|4856|nephroblastoma overexpressed gene##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein	0.306817	CTCF.p2:10:0.307
chr8	9007630	9007710	reg1000637.p1	4.002	+	TSC_hg19_v1_chr8_+_8860443 AK291062 AK226180 AY310909 BC035279 AB527653 DQ890841 DQ893996	-147165	+	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	-147305	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	-256732	-	TSC_hg19_v1_chr8_-_9008167 BC043388 AK024067 NM_024607	508	-	TSC_hg19_v1_chr8_-_9009055 AK096119 NM_001201329	1430	-	TSC_hg19_v1_chr8_+_9413421 BC098394	405735	+	AK291062|ERI1|90459|exoribonuclease 1##AK226180|ERI1|90459|exoribonuclease 1##AY310909|ERI1|90459|exoribonuclease 1##BC035279|ERI1|90459|exoribonuclease 1##DQ890841|ERI1|90459|exoribonuclease 1##DQ893996|ERI1|90459|exoribonuclease 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##BC043388|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK024067|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_024607|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##AK096119|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##NM_001201329|PPP1R3B|79660|protein phosphatase 1, regulatory subunit 3B##BC098394|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	0.0	
chrX	102744816	102744894	reg1032319.p1	4.002	+	AF187064 M38188 NM_014380	-112747	+	TSC_hg19_v1_chrX_+_102631465 AK315371 AK057859 BC051713 AY833562 BC003190	-113392	+	NM_206915 NM_206917 TSC_hg19_v1_chrX_+_102631313	-113555	+	AF422143 NM_080879	29561	-	TSC_hg19_v1_chrX_+_102840485 NM_001006935 NM_001006937 NM_024863 AL833640 AK024827 AK225117 Z36792 AK093021 AX747862 AF271783 AY885169 BC012296	95600	+	BC008703 NM_001006933 NM_032926 BC007622 TSC_hg19_v1_chrX_+_102862898 AK098494 AF163263	118014	+	AF187064|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##M38188|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##NM_014380|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AK315371|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AK057859|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##BC051713|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AY833562|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##BC003190|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##NM_206915|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##NM_206917|NGFRAP1|27018|nerve growth factor receptor (TNFRSF16) associated protein 1##AF422143|RAB40A|142684|RAB40A, member RAS oncogene family##NM_080879|RAB40A|142684|RAB40A, member RAS oncogene family##NM_001006935|TCEAL4|79921|transcription elongation factor A (SII)-like 4##NM_001006937|TCEAL4|79921|transcription elongation factor A (SII)-like 4##NM_024863|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AL833640|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AK024827|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AK225117|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AK093021|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AF271783|TCEAL4|79921|transcription elongation factor A (SII)-like 4##AY885169|TCEAL4|79921|transcription elongation factor A (SII)-like 4##BC012296|TCEAL4|79921|transcription elongation factor A (SII)-like 4##BC008703|TCEAL3|85012|transcription elongation factor A (SII)-like 3##NM_001006933|TCEAL3|85012|transcription elongation factor A (SII)-like 3##NM_032926|TCEAL3|85012|transcription elongation factor A (SII)-like 3##BC007622|TCEAL3|85012|transcription elongation factor A (SII)-like 3##AK098494|TCEAL3|85012|transcription elongation factor A (SII)-like 3##AF163263|TCEAL3|85012|transcription elongation factor A (SII)-like 3	0.955623	CTCF.p2:8:0.956
chr10	38281225	38281360	reg1030719.p2	4.001	+	AJ491696 NM_145011 TSC_hg19_v1_chr10_-_38265576 AK122958 BC036038 AK056452 AX721125	-15765	-	BC146820 TSC_hg19_v1_chr10_-_38147013 AK299357	-134293	-	BC132915 BC132917 BC110869 BC021819 AJ491695 AJ492196 NM_021045 TSC_hg19_v1_chr10_-_38146539	-134874	-	TSC_hg19_v1_chr10_+_38299631 NM_006954 NM_006974 AK303445 AK292844 BC017760 AK027057 D31763	18303	+	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	101991	+	AK295332 AY829267 AF165514 AF165517 BC071987 TSC_hg19_v1_chr10_+_38645320 AK293968 AK307174 CU687208	364045	+	AJ491696|ZNF25|219749|zinc finger protein 25##NM_145011|ZNF25|219749|zinc finger protein 25##AK122958|ZNF25|219749|zinc finger protein 25##BC036038|ZNF25|219749|zinc finger protein 25##AK056452|ZNF25|219749|zinc finger protein 25##BC146820|ZNF248|57209|zinc finger protein 248##AK299357|ZNF248|57209|zinc finger protein 248##BC132915|ZNF248|57209|zinc finger protein 248##BC132917|ZNF248|57209|zinc finger protein 248##BC110869|ZNF248|57209|zinc finger protein 248##BC021819|ZNF248|57209|zinc finger protein 248##AJ491695|ZNF248|57209|zinc finger protein 248##AJ492196|ZNF248|57209|zinc finger protein 248##NM_021045|ZNF248|57209|zinc finger protein 248##NM_006954|ZNF33A|7581|zinc finger protein 33A##NM_006974|ZNF33A|7581|zinc finger protein 33A##AK303445|ZNF33A|7581|zinc finger protein 33A##AK292844|ZNF33A|7581|zinc finger protein 33A##BC017760|ZNF33A|7581|zinc finger protein 33A##AK027057|ZNF33A|7581|zinc finger protein 33A##D31763|ZNF33A|7581|zinc finger protein 33A##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A##AK295332|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AY829267|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165514|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165517|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC071987|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK293968|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK307174|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2	0.174977	
chr10	73404438	73404618	reg1023509.p3	4.001	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	-247790	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-325482	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-325503	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	75064	-	AK074172 NM_001168390	93052	-	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	128778	-	BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54	0.0	
chr1	107993732	107993893	reg1033383.p2	4.001	+	AB023193 TSC_hg19_v1_chr1_+_107683657	-310208	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-311070	+	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	-394447	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	237312	-	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	513788	-	AJ619961 NM_213651 AK292567	741584	-	AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.0	
chr12	108754319	108754453	reg1034963.p1	4.001	+	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	-21302	-	NM_001142345	-39948	-	BC110330 AB018332 NM_014653	-230899	+	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	154696	+	AB385287 D63879 TSC_hg19_v1_chr12_-_108954936 BC103706 BC093784 BC111983 BC143253 BC004547 BC024279 AB020880 AF387506 BC032601	200548	-	TSC_hg19_v1_chr12_-_108954945 AK225174 AK304834	200560	-	U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing##D63879|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC103706|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC093784|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC111983|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC143253|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC004547|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC024279|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AB020880|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AF387506|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC032601|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK225174|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK304834|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3	0.0	
chr1	227015617	227015798	reg1001622.p1	4.001	+	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	-88769	-	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-279090	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-279206	+	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	42573	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	112239	+	TSC_hg19_v1_chr1_+_227127991 BX648860 BC005171	112268	+	BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3##BX648860|ADCK3|56997|aarF domain containing kinase 3##BC005171|ADCK3|56997|aarF domain containing kinase 3	0.0	
chr19	45189399	45189470	reg1045081.p2	4.001	+	BC083499 NM_001127893 NM_020219	-14711	+	TSC_hg19_v1_chr19_+_45147209 AK300349 AK094177 BC015542	-42218	+	TSC_hg19_v1_chr19_+_45147180 AK290946	-42253	+	BC144608 NM_001039213	12986	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	62547	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	91722	+	BC083499|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_001127893|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_020219|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##AK300349|PVR|5817|poliovirus receptor##AK094177|PVR|5817|poliovirus receptor##BC015542|PVR|5817|poliovirus receptor##AK290946|PVR|5817|poliovirus receptor##BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c	0.0	
chr20	44600554	44600709	reg1034303.p1	4.001	+	TSC_hg19_v1_chr20_-_44563695 AK097925	-36937	-	TSC_hg19_v1_chr20_-_44563589 BC133006 BC133008	-37030	-	TSC_hg19_v1_chr20_+_44563323 NM_022104 AK299435 AB050014 AK056553 BC010005 BC013365	-37285	+	TSC_hg19_v1_chr20_-_44600828 AF395833 BC041331 BC142981 NM_022095	179	-	TSC_hg19_v1_chr20_-_44600992 AK296989	362	-	TSC_hg19_v1_chr20_+_44637546 AK298246 AK301446 AK311648 AK313137 AK316145 J05070 NM_004994 AK303080 BC006093 DQ896791 EU176415 AB528343 CU675241	36921	+	AK097925|FLJ40606|643549|uncharacterized LOC643549##BC133006|FLJ40606|643549|uncharacterized LOC643549##BC133008|FLJ40606|643549|uncharacterized LOC643549##NM_022104|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AK299435|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AB050014|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AK056553|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##BC010005|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##BC013365|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AF395833|ZNF335|63925|zinc finger protein 335##BC041331|ZNF335|63925|zinc finger protein 335##BC142981|ZNF335|63925|zinc finger protein 335##NM_022095|ZNF335|63925|zinc finger protein 335##AK296989|ZNF335|63925|zinc finger protein 335##AK298246|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK301446|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK313137|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK316145|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##J05070|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##NM_004994|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK303080|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##BC006093|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##DQ896791|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##EU176415|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)	0.93271	CTCF.p2:-48:0.933
chr21	36362226	36362359	reg1041063.p1	4.001	+	TSC_hg19_v1_chr21_-_36260987 BC050363 X79549 D43967 D43968 NM_001001890 NM_001122607	-101311	-	L34598 D10570 TSC_hg19_v1_chr21_-_36260304	-102095	-	AF312386 AF312387 AY004251 TSC_hg19_v1_chr21_-_36259416 S60998	-102880	-	AB384992 AF419247 U19601 BC110828 TSC_hg19_v1_chr21_-_36421376 AK226159	58994	-	BC136380 BC136381 BC144053 TSC_hg19_v1_chr21_-_36421490	59186	-	TSC_hg19_v1_chr21_-_36421575 X90979	59275	-	BC050363|RUNX1|861|runt-related transcription factor 1##X79549|RUNX1|861|runt-related transcription factor 1##D43967|RUNX1|861|runt-related transcription factor 1##D43968|RUNX1|861|runt-related transcription factor 1##NM_001001890|RUNX1|861|runt-related transcription factor 1##NM_001122607|RUNX1|861|runt-related transcription factor 1##L34598|RUNX1|861|runt-related transcription factor 1##D10570|RUNX1|861|runt-related transcription factor 1##S60998|RUNX1|861|runt-related transcription factor 1##U19601|RUNX1|861|runt-related transcription factor 1##BC110828|RUNX1|861|runt-related transcription factor 1##AK226159|RUNX1|861|runt-related transcription factor 1##BC136380|RUNX1|861|runt-related transcription factor 1##BC136381|RUNX1|861|runt-related transcription factor 1##BC144053|RUNX1|861|runt-related transcription factor 1##X90979|RUNX1|861|runt-related transcription factor 1	0.0	
chr6	15323481	15323641	reg1027626.p2	4.001	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-74448	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-74660	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-77149	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	339616	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	339729	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	805741	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.0	
chr1	224691106	224691246	reg1031659.p2	4.000	+	AB209887 NM_001115113 NM_025160	-69176	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-69416	-	BC000573 TSC_hg19_v1_chr1_+_224544609 AK222634 BX649076 AM392966 AM393151 AM393502 DQ891901 DQ895087	-146565	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	113003	+	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	426189	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	924553	-	AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##BC000573|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK222634|CNIH4|29097|cornichon homolog 4 (Drosophila)##BX649076|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM392966|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM393151|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM393502|CNIH4|29097|cornichon homolog 4 (Drosophila)##DQ891901|CNIH4|29097|cornichon homolog 4 (Drosophila)##DQ895087|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor	0.0	
chr13	50365459	50365608	reg1034564.p1	4.000	+	TSC_hg19_v1_chr13_-_50265611 BC021021 AF243433 BC092471 BC073152 NM_032565	-99904	-	TSC_hg19_v1_chr13_-_50265590 DQ891521 DQ894711 BC018478	-100012	-	AF441378 NM_138450	-163099	+	TSC_hg19_v1_chr13_-_50366675 AF034756 DQ892644 DQ895882 AB528414 AF005263 Y12394 BC017355 BC024202 AK291000 AK223480	1084	-	TSC_hg19_v1_chr13_-_50366705 AK290528	1202	-	TSC_hg19_v1_chr13_-_50367200 BC035090 NM_002267	1590	-	BC021021|EBPL|84650|emopamil binding protein-like##AF243433|EBPL|84650|emopamil binding protein-like##BC092471|EBPL|84650|emopamil binding protein-like##BC073152|EBPL|84650|emopamil binding protein-like##NM_032565|EBPL|84650|emopamil binding protein-like##DQ891521|EBPL|84650|emopamil binding protein-like##DQ894711|EBPL|84650|emopamil binding protein-like##BC018478|EBPL|84650|emopamil binding protein-like##AF441378|ARL11|115761|ADP-ribosylation factor-like 11##NM_138450|ARL11|115761|ADP-ribosylation factor-like 11##AF034756|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##DQ892644|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##DQ895882|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AF005263|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##Y12394|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC017355|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC024202|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK291000|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK223480|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK290528|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC035090|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##NM_002267|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)	0.0	
chr14	107150921	107151092	reg1035849.p2	4.000	+	GQ232991 EU814957 AY003867 GQ233006 AY003724 AY003757 FJ840009 GU552709 AY003791 FJ840366 JF810271 FJ840139 FJ874031 AF017464 HM774748 HM775002 HQ704029 DQ524134 DQ840815 DQ840856 AY530312 AY941926 AY986399 DQ100849 AB067106 AB363089 DQ535377 U00563 U64502 AY392909 AY393069 AY393070 AF062111 AF062168 X81739 X81750 Z14221 TSC_hg19_v1_chr14_-_107131555 AK097017 AK128476 AK130433	-19617	-	AF103081 JN110643 JN110687 GQ504895 GQ504960 HM774028 HM774358 HM774582 HM774889 X98961 AF165107 AY423163 AF485471 AF485473 AJ306675 AY423172 FN563800 EF633801 HM994977 HM994995 HM995120 HM995247 HM995290 HM995392 HM995519 HM995754 HM995991 HM996039 HM996369 AY866776 DQ322973 DQ926438 AF471404 AJ245345 AJ401162 AM279604 AY866777 DQ100932 DQ100975 DQ926053 DQ926476 GU570357 L19914 Z96976 AB067024 AB067127 AB363182 AB373619 AF231404 AF471217 AF471316 AF471319 AF471331 AF471353 AJ519231 AJ556646 AJ556650 AY640562 AY866705 AY866733 AY971141 DQ065617 DQ065721 DQ100842 DQ535272 DQ535332 DQ926279 EF633803 EF633809 EF633824 EF633825 FJ385293 FJ492933 FN563769 FN563801 FN563814 FN563817 FN563830 FN563831 L38018 Y08405 Y08406 Z96975 Z98724 AJ519258 AJ519228 AJ519314 AJ519323 AJ519243 AJ519280 AJ519310 AJ519335 AJ519268 AJ519313 X62126 TSC_hg19_v1_chr14_-_107122620	-28517	-	DQ454926 GU552751 DQ523845 DQ454743 DQ454741 FJ873884 FJ873949 FJ874082 DQ454745 AY003790 EU350425 EU667608 EF407835 DQ454756 DQ454758 DQ322814 AF343367 AF343413 AF103266 AJ007443 AF103288 FJ385341 AF103034 AF103338 AF062236 JN110970 L03820 HM774324 HM774398 HM774726 HM774904 HM774928 L33041 HM775043 AF408742 AF485449 AF078936 AF485451 AF485453 AF485455 EF633815 DQ524036 DQ524153 DQ926062 HM995709 HM995710 HM995711 HM995712 HM995713 HM995863 HM995864 HM995866 DQ322813 HM996268 AJ245306 AY044149 DQ100802 DQ100910 DQ926129 AB063797 AB063898 AB063899 AF022008 AF099199 AF398961 AF471517 AF471518 AF471519 AF471520 AJ224899 AJ399811 AY554175 AY640527 DQ065678 DQ535356 DQ779565 DQ779566 FJ385288 FN563805 FN563806 FN563810 FN563812 FN563827 FN563828 HQ689733 JF806286 X77017 L48239 AY392926 AY393064 AY452138 X65898 X81752 X81753 BC073782 AF067420 TSC_hg19_v1_chr14_-_107114275 AK097071	-36897	-	AY179836 AY179838 AY179841 AY179844 AY179846 AY179847 AY179848 AY179850 AY179854 AY179855 AY179856 AY179858 AY179860 AY003797 DQ454801 EF583677 EU099154 EU099192 AY003810 DQ454853 AY003779 DQ454620 DQ523910 GU552683 AY003802 AY003865 DQ454802 DQ454808 DQ454937 GU552691 GU552774 HM773974 FJ873961 EF441761 DQ454821 AY996332 FJ840044 FJ840053 FJ840143 FJ840193 FJ840194 FJ840196 FJ840204 FJ840239 FJ873866 FJ873869 FJ873895 FJ873936 FJ874043 GQ232929 HM116184 EF583683 EF175392 EU099153 GQ232967 GU358675 EF583681 EU099116 GU358674 JF810254 EF091907 EF175405 EU667599 EF091906 EF091908 EF091909 EF091910 EF175388 EF175390 EF175395 EF175406 EF175412 EF175417 EF175418 EF175420 EF175428 EF407848 EF441755 EU099106 EU350411 EU350412 EU433866 EU433872 EU433873 EU433879 EU667594 EU667595 EU667596 EU667597 EU667598 EU814958 EU814959 EU814960 EU814963 EU814966 FJ694873 FJ694874 GQ232838 GQ232965 GU358670 GU358676 GU358678 GU358682 JF810255 JF810274 AF103216 EF175425 EF583662 EF583663 EF583664 EF583665 EF583667 EF583673 EF583674 EF583675 EF583682 EU350410 M35478 EF407834 EF566907 EF407828 EF407830 EF583660 DQ100847 AY998726 AF209884 AJ007325 EF473862 EU099204 U86786 U86795 U86797 AF308545 AF308549 AF308553 AF308554 AF308559 AF308560 AF308561 EU090245 GQ903485 GQ903489 GQ903492 EU099120 GQ903503 AJ239384 EU099100 EU099208 Z80841 AF103052 AF103307 EU099086 EU099105 EU099142 EU099250 EU099176 EU099293 HM774304 AY515008 EU099141 EU099212 JN110763 JN110845 JN110914 JN111163 L04334 L04335 L04344 FJ385405 FJ385410 FJ385424 FJ385430 FJ385431 HM774065 HM774083 HM774091 HM774102 HM774365 HM774646 HM774653 HM774656 HM774681 HM774757 HM774769 HM774771 HM774786 HM774863 HM774965 HM775047 AF103339 AY515006 DQ523992 EU099090 EU099092 EU099115 EU099162 EU099179 EU099210 EU099218 EU099282 DQ097895 EF624069 EF624074 EF624075 EF624077 EF624128 EF624129 EF624130 EF624131 EF624138 EF624140 EF624141 EF624143 EF624174 EF624175 EF624176 EF624177 EF624179 EF624180 EF624182 EF624183 EF624184 EF624185 EF624186 EF624187 EF624188 EF624189 EF624190 EF624191 EF624192 EF624193 EU099060 EU099066 EU099128 EU099129 EU099145 EU099158 EU099160 EU099161 EU099165 EU099177 EU099178 EU099180 EU099247 EU146320 EU146330 EU146331 EU146336 EU146348 EU146349 EU146350 EU146351 EU146352 EU146353 EU146354 EU146355 EU146356 EU146357 EU146359 EU146383 EU146385 EU146386 M98324 AY393263 AY393515 DQ524120 EU090241 EU099081 EU099095 EU099099 EU099103 EU099111 EU099121 EU099135 EU099136 EU099164 EU099170 EU099174 EU099189 EU099205 EU099207 EU099209 EU099220 AF306353 AJ132852 AM259138 L12098 AF035025 AY392856 AY392858 AY393000 AY393010 AY393106 AY393123 AY393128 AY393133 AY393135 AY393137 AY393138 AY393233 AY393338 AY393342 AY393350 AY393373 AY393495 AY393496 AY393501 AY393503 AY393504 AY393508 AY393513 AY393514 AY393516 AY393517 AY393518 AY393519 AY393520 AY393522 AY393523 AY393525 AY393528 AY393532 AY393535 AY393538 AY393539 AY393540 AY393541 AY393542 AY393543 AY393544 AY393545 AY393546 AY393604 AY393611 AY393682 DQ100913 EU099069 EU099072 EU099083 EU099117 EU099138 EU099167 EU099168 EU099171 EU099175 EU099188 EU099198 EU099201 EU099202 EU099211 EU099219 EU099236 HM994945 AY574947 AY093586 AY093587 DQ100805 DQ100924 JN158773 AY093585 AF035785 AF098366 AY781822 DQ100688 DQ523989 HM995306 U00502 DQ100709 DQ100908 DQ523957 DQ524013 DQ524031 DQ524041 DQ524127 HM994992 HM994994 HM994997 HM994998 HM995013 HM995114 HM995174 HM995178 HM995180 HM995227 HM995241 HM995248 HM995283 HM995304 HM995307 HM995375 HM995447 HM995450 HM995512 HM995517 HM995520 HM995558 HM995678 HM995679 HM995680 HM995681 HM995682 HM995683 HM995684 HM995685 HM995744 HM996065 HM996269 HM996387 AF004321 AB063837 AB063906 AB063914 AB067012 AB067013 AB067018 AB067022 AB067235 AB363092 AF099200 AF174076 AY781868 AY866799 AY941859 DQ065663 DQ065677 DQ065701 DQ840709 DQ926327 EF178030 FJ195540 FJ385306 FJ385381 GQ856069 GQ903493 GQ903497 GQ903502 GQ903514 Z92894 AB027437 AB063666 AB063701 AB063715 AB063720 AB063763 AB063768 AB063778 AB063780 AB063785 AB063831 AB063902 AB063903 AB063921 AB066830 AB066835 AB066837 AB066840 AB066841 AB066842 AB066843 AB066928 AB066936 AB066939 AB066942 AB066944 AB066948 AB066949 AB066953 AB067158 AB067170 AB067305 AB067309 AB067333 AB067383 AB363078 AB363086 AB363094 AB363097 AB373608 AF021950 AF021951 AF021952 AF021970 AF021992 AF035784 AF062098 AF062127 AF062189 AF062216 AF062283 AF115114 AF115115 AF115116 AF115118 AF115119 AF174042 AF174065 AF174069 AF174073 AF174096 AF174109 AF174126 AF193848 AF217789 AF408721 AF460964 AF460965 AJ239346 AJ239357 AJ239365 AJ239372 AJ239376 AJ389170 AJ389172 AJ389179 AJ389181 AJ413995 AJ414000 AJ414001 AJ414002 AJ414004 AJ414008 AJ414009 AJ414010 AJ414015 AJ414017 AJ414020 AJ414021 AJ414023 AJ414027 AJ416562 AJ555258 AJ555262 AJ555275 AM040567 AY033246 AY055485 AY059634 AY281328 AY281329 AY466503 AY485361 AY553640 AY557623 AY557624 AY557625 AY557626 AY557627 AY561708 AY577304 AY781812 AY927666 AY941846 AY941940 D16837 DQ100681 DQ100723 DQ100733 DQ100777 DQ100808 DQ100811 DQ100820 DQ100839 DQ100902 DQ100906 DQ100912 DQ100952 DQ212523 DQ490739 DQ926531 EF555585 EF624068 EF624070 EF624071 EF624072 EF624073 EF624078 EF624079 EF624132 EF624136 EF624178 EF624181 EF624194 EF624195 EU202446 EU202448 EU835547 EU835554 FJ039781 FJ039784 FJ385379 GQ903484 GQ903486 GQ903487 GQ903490 GQ903491 GQ903495 GQ903496 GQ903498 GQ903500 GQ903501 GQ903504 GQ903507 GQ903509 GQ903511 GU570264 GU570271 GU570274 HM152493 HM152496 HM152502 HM152504 HM152527 HQ378401 HQ392874 HQ689778 HQ689781 JN158782 JN159449 JN159454 L14454 L23519 S73955 U00518 U00550 U00583 U71105 U85240 U89903 X64237 X67903 Z18841 Z34906 Z34908 Z34957 Z34959 Z34960 Z34961 Z34962 Z34963 AY927663 JN158517 DQ535261 DQ535284 DQ535416 DQ535445 DQ535451 DQ535460 EF177997 EF178006 EF178014 GU570268 Z35123 M18516 AF062105 AF062117 AF062156 AF062161 AF062175 AF062193 AF062198 AF062208 AF174026 AY172957 L06923 M62723 X65889 Z14214 Z47222 Z47224 Z47227 Z47233 Z47244 Z47245 Z47246 Z47247 Z47248 Z47249 Z47250 Z47251 Z47252 Z47253 Z47254 Z47255 Z47256 Z47257 Z47258 Z47259 Z47260 Z47261 Z47262 Z47263 Z47264 Z47265 Z47266 Z47267 Z47268 Z47269 Z47270 Z47271 Z47272 Z47273 Z80837 Z80853 CU688244 L23561 M24669 M24670 TSC_hg19_v1_chr14_-_107170387 BC062336	19229	-	M87789 L29121 BC069016 L08086 AK123800 BC025314 BC026038 AK131045 AK126133 AK130642 TSC_hg19_v1_chr14_-_107170426 AK097360 AK097364 AK128394 AK307688 BC016381 AK096985 AK097305 AK097356 AK123070 AK129512 AK129622 AK129777 AK130786 AK131065 BC070333 AK097361 AK097363 AK058027 AK129809	19409	-	FJ840101 FJ840103 FJ840105 FJ840106 FJ840110 FJ840116 FJ840119 FJ840153 FJ840184 FJ840185 FJ840188 FJ840189 FJ840190 FJ840192 FJ840197 FJ840199 FJ840203 FJ840206 FJ840207 FJ840208 FJ840209 FJ873863 FJ873875 FJ873894 FJ873921 FJ873929 FJ873938 FJ873947 FJ873950 FJ873952 FJ873965 FJ873977 FJ873996 FJ873997 FJ873999 FJ874008 FJ874014 FJ874026 FJ874040 FJ874044 FJ874061 FJ874068 FJ874078 FJ874079 FJ874080 HM116116 HM116121 HM116146 HM116172 HM116181 HM116193 HM116196 HM116197 HM116201 HM116225 GQ232804 GQ232899 AY003747 AY392896 AY393031 AY393032 AY393052 AY393293 AY393389 AY393434 AY393562 AF103042 AF459629 HM774620 HM774632 AM183987 AM279526 AY312400 EF177989 DQ926546 AJ389183 DQ100956 DQ926096 U00507 AB066845 AB066846 AB066847 AB066848 AB066849 AB066853 AB066854 AB066855 AB066856 AB066860 AB066863 AB066867 AB066872 AB066875 AB066876 AB067169 AB067183 AB067187 AB067188 AB067191 AB067197 AB067198 AB067200 AB067201 AB067203 AB067204 AB067205 AB067206 AB067207 AB067208 AB067209 AB067210 AB067211 AB067212 AB067213 AB067215 AB067216 AB067217 AB067219 AB067220 AB067227 AB067230 AF062247 AF174045 AF174063 AF174117 AF442758 AJ239338 AJ239347 AJ389184 AY781820 AY941845 DQ926224 DQ926451 FJ385297 GU570281 GU570282 HQ378332 U00575 U77371 X79160 Z80836 DQ535270 DQ535432 L28050 M34027 AF062153 AJ131058 AY190826 L21960 TSC_hg19_v1_chr14_-_107179280 AK097955	28184	-	AK097017|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130433|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC073782|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF067420|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF035025|IGHV1-69|28461|immunoglobulin heavy variable 1-69##BC062336|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##M87789|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC069016|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123800|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC025314|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC026038|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK126133|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK130642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097360|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097364|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128394|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016381|IGHM|3507|immunoglobulin heavy constant mu##AK096985|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097305|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097356|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123070|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129512|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129622|IGHM|3507|immunoglobulin heavy constant mu##AK129777|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK131065|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC070333|IGHV1-69|28461|immunoglobulin heavy variable 1-69##AK097361|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097363|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058027|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129809|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097955|IGHA1|3493|immunoglobulin heavy constant alpha 1	1.469201	CTCF.p2:-6:0.806	CTCF.p2:-107:0.284
chr15	67377616	67377786	reg1022272.p1	4.000	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	-19300	+	TSC_hg19_v1_chr15_+_67358179 AK290881	-19526	+	NM_001142861 U59914	-376772	+	NM_001145102 AK316017	40422	+	AK298139 NM_001145103	52657	+	NM_001145104 AK300614 AK301348	80795	+	NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##AK290881|SMAD3|4088|SMAD family member 3##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3##AK298139|SMAD3|4088|SMAD family member 3##NM_001145103|SMAD3|4088|SMAD family member 3##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3	0.0	
chr17	73857508	73857620	reg1034753.p1	4.000	+	AB464357 CU679759 DQ891052 DQ894231 TSC_hg19_v1_chr17_-_73851417 AK293214 AF087866 BC007452 AK057881 BC010616 AK294082 AK294155 AK300875 NM_012478	-6126	-	TSC_hg19_v1_chr17_-_73840622 BC067084 NM_199242 AK300316	-16780	-	TSC_hg19_v1_chr17_-_73840495 AK024474	-17053	-	TSC_hg19_v1_chr17_-_73874063 BC017299	16499	-	TSC_hg19_v1_chr17_-_73874663 AY026763 NM_033452	17087	-	TSC_hg19_v1_chr17_-_73893051 BC021259 NM_173547	35499	-	DQ891052|WBP2|23558|WW domain binding protein 2##DQ894231|WBP2|23558|WW domain binding protein 2##AK293214|WBP2|23558|WW domain binding protein 2##AF087866|WBP2|23558|WW domain binding protein 2##BC007452|WBP2|23558|WW domain binding protein 2##AK057881|WBP2|23558|WW domain binding protein 2##BC010616|WBP2|23558|WW domain binding protein 2##AK294082|WBP2|23558|WW domain binding protein 2##AK294155|WBP2|23558|WW domain binding protein 2##AK300875|WBP2|23558|WW domain binding protein 2##NM_012478|WBP2|23558|WW domain binding protein 2##BC067084|UNC13D|201294|unc-13 homolog D (C. elegans)##NM_199242|UNC13D|201294|unc-13 homolog D (C. elegans)##AK300316|UNC13D|201294|unc-13 homolog D (C. elegans)##AK024474|UNC13D|201294|unc-13 homolog D (C. elegans)##BC017299|TRIM47|91107|tripartite motif containing 47##AY026763|TRIM47|91107|tripartite motif containing 47##NM_033452|TRIM47|91107|tripartite motif containing 47##BC021259|TRIM65|201292|tripartite motif containing 65##NM_173547|TRIM65|201292|tripartite motif containing 65	0.85292	CTCF.p2:9:0.853
chr5	75143452	75143616	reg1030787.p2	4.000	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-130274	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	-135272	-	NM_001130105	-335729	-	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	235737	+	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	555582	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	775611	-	BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001130105|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2	0.0	
chr6	56628954	56629068	reg1027850.p1	4.000	+	AF400226 AF400227 M69225 BC065536 L11690 NM_001723 NM_015548	-121372	-	BC038763 TSC_hg19_v1_chr6_-_56407722	-221303	-	AF330693 TSC_hg19_v1_chr6_-_56258945	-370087	-	TSC_hg19_v1_chr6_-_56708446 U31850	79461	-	AK294830 TSC_hg19_v1_chr6_-_56716493	87441	-	AK299898 TSC_hg19_v1_chr6_-_56716715	87703	-	AF400226|DST|667|dystonin##AF400227|DST|667|dystonin##M69225|DST|667|dystonin##BC065536|DST|667|dystonin##L11690|DST|667|dystonin##NM_001723|DST|667|dystonin##NM_015548|DST|667|dystonin##AF330693|COL21A1|81578|collagen, type XXI, alpha 1##U31850|DST|667|dystonin##AK294830|DST|667|dystonin##AK299898|DST|667|dystonin	0.0	
chr7	121036610	121036791	reg1014354.p2	4.000	+	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	-286	-	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	-363	-	AF169963 NM_057168	-67611	+	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	476461	+	TSC_hg19_v1_chr7_+_121513214 U88967	476521	+	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	747589	-	AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase	0.0	
chr9	38642726	38642855	reg1020335.p2	4.000	+	TSC_hg19_v1_chr9_-_38620602 BC056266	-22167	-	AB385522 AB095935 BC152434 NM_147195	-22469	-	TSC_hg19_v1_chr9_-_38424452 AB463783 NM_001007563	-218325	-	AB385498 AK294281 AB051501 BC132737 BC144130 AK056833 NM_033655	645390	-	AK302569 NM_001040065 NM_001085452 BC146855	712895	+	AK302569 NM_001040065 NM_001085452 BC146855	1242171	+	BC056266|ANKRD18A|253650|ankyrin repeat domain 18A##AB095935|ANKRD18A|253650|ankyrin repeat domain 18A##BC152434|ANKRD18A|253650|ankyrin repeat domain 18A##NM_147195|ANKRD18A|253650|ankyrin repeat domain 18A##NM_001007563|IGFBPL1|347252|insulin-like growth factor binding protein-like 1##AK294281|CNTNAP3|79937|contactin associated protein-like 3##AB051501|CNTNAP3|79937|contactin associated protein-like 3##BC132737|CNTNAP3|79937|contactin associated protein-like 3##BC144130|CNTNAP3|79937|contactin associated protein-like 3##AK056833|CNTNAP3|79937|contactin associated protein-like 3##NM_033655|CNTNAP3|79937|contactin associated protein-like 3##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2	0.854803	CTCF.p2:-15:0.855
chr10	76771403	76771515	reg1025721.p2	3.999	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-185105	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-834872	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-834929	+	AY686755 NM_001003892 BC137321 BC137322	46846	-	AB027004 AB103375 NM_016364	87788	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	97455	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr1	116088913	116089028	reg1035757.p1	3.999	+	BC032517 NM_002506 X52599	-208117	-	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	-456854	-	NM_000549	-516556	+	NM_001172411 NM_138959 BC065272 AF481859	95622	+	AB057596 NM_001172412	96279	+	CU692536 DQ893219 DQ896548 D55655 AK225959 TSC_hg19_v1_chr1_-_116311307	222264	-	BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##NM_000549|TSHB|7252|thyroid stimulating hormone, beta##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##DQ893219|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ896548|CASQ2|845|calsequestrin 2 (cardiac muscle)##D55655|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK225959|CASQ2|845|calsequestrin 2 (cardiac muscle)	0.903603	CTCF.p2:-16:0.904
chr11	96159891	96160042	reg1009341.p1	3.999	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-36792	+	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	-36924	-	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	-83563	-	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	2731783	+	AB013802 AB013803 NM_175566	3266907	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	4398162	+	AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42	0.0	
chr12	14929635	14929747	reg1031885.p2	3.999	+	TSC_hg19_v1_chr12_+_14927338 AK001765 AK303301 BC003602 CU678528 AL133626	-2281	+	NM_177925 TSC_hg19_v1_chr12_+_14927302	-2406	+	AB527963 TSC_hg19_v1_chr12_-_14924064 AK311916 BC020884 NM_175054	-5650	-	AF118023 TSC_hg19_v1_chr12_-_14956333	26635	-	TSC_hg19_v1_chr12_-_14956403 AB029309 BC023532 BC001621 NM_016312	26694	-	TSC_hg19_v1_chr12_-_14956411 BX647347 AK297410 AK302244	26747	-	AK001765|H2AFJ|55766|H2A histone family, member J##AK303301|H2AFJ|55766|H2A histone family, member J##BC003602|H2AFJ|55766|H2A histone family, member J##AL133626|H2AFJ|55766|H2A histone family, member J##NM_177925|H2AFJ|55766|H2A histone family, member J##BC020884|HIST4H4|121504|histone cluster 4, H4##NM_175054|HIST4H4|121504|histone cluster 4, H4##AF118023|WBP11|51729|WW domain binding protein 11##AB029309|WBP11|51729|WW domain binding protein 11##BC023532|WBP11|51729|WW domain binding protein 11##BC001621|WBP11|51729|WW domain binding protein 11##NM_016312|WBP11|51729|WW domain binding protein 11##BX647347|WBP11|51729|WW domain binding protein 11##AK297410|WBP11|51729|WW domain binding protein 11##AK302244|WBP11|51729|WW domain binding protein 11	0.509331	CTCF.p2:-5:0.509
chr13	48652424	48652545	reg1030517.p1	3.999	+	TSC_hg19_v1_chr13_-_48612129 AK316271	-40376	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	-40670	+	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	-77033	-	AF230381 AF300618 CR457276 CR541830 DQ893076 DQ896333 TSC_hg19_v1_chr13_-_48669222	16737	-	AK223017 TSC_hg19_v1_chr13_-_48669236 AF161475	16750	-	TSC_hg19_v1_chr13_-_48669241 AK001934 AK222713 NM_014166 AK301835 BC005189	16785	-	AK316271|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF230381|MED4|29079|mediator complex subunit 4##AF300618|MED4|29079|mediator complex subunit 4##CR457276|MED4|29079|mediator complex subunit 4##CR541830|MED4|29079|mediator complex subunit 4##DQ893076|MED4|29079|mediator complex subunit 4##DQ896333|MED4|29079|mediator complex subunit 4##AK223017|MED4|29079|mediator complex subunit 4##AF161475|MED4|29079|mediator complex subunit 4##AK001934|MED4|29079|mediator complex subunit 4##AK222713|MED4|29079|mediator complex subunit 4##NM_014166|MED4|29079|mediator complex subunit 4##AK301835|MED4|29079|mediator complex subunit 4##BC005189|MED4|29079|mediator complex subunit 4	0.970301	CTCF.p2:-22:0.970
chr14	94442372	94442469	reg1024912.p1	3.999	+	AB056723 NM_016150	-18654	-	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	-48712	+	NM_001207071 NM_138344 AK093387 AX748092	-57172	+	AK303686 TSC_hg19_v1_chr14_-_94442905	488	-	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	656	-	TSC_hg19_v1_chr14_+_94492685 BC009615 BC068058 NM_023112	50283	+	AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2##BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	0.0	
chr17	78711058	78711239	reg1023789.p1	3.999	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-192330	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-192499	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-260821	-	TSC_hg19_v1_chr17_+_78935064 BC073898	223984	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	254493	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	254546	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.019185	
chr1	94311888	94312006	reg1029443.p2	3.999	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	-164620	-	TSC_hg19_v1_chr1_+_94057602 BC084562	-254340	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-254407	+	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	32767	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	32801	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	63015	-	U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit	0.0	
chr19	967550	967674	reg1032034.p2	3.999	+	TSC_hg19_v1_chr19_+_926038 AY845638 BC060828 NM_005224	-41601	+	TSC_hg19_v1_chr19_+_917306 BC141812 NM_032551 AY253982 BC140825 AB051065 AF343725 AJ309020 AY029541 AY253981 BC111094 EU883577	-50219	+	NM_138774 TSC_hg19_v1_chr19_-_913224	-54388	-	TSC_hg19_v1_chr19_+_984344 NM_024100 BC000040 BC001648 CU674808	16722	+	TSC_hg19_v1_chr19_+_1000312 AY507106 AY507107 NM_138690	32753	+	DQ893224 DQ896554 CU679197 TSC_hg19_v1_chr19_-_1021121 BC008957 DQ005958	53446	-	AY845638|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC060828|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_005224|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC141812|KISS1R|84634|KISS1 receptor##NM_032551|KISS1R|84634|KISS1 receptor##AY253982|KISS1R|84634|KISS1 receptor##BC140825|KISS1R|84634|KISS1 receptor##AB051065|KISS1R|84634|KISS1 receptor##AF343725|KISS1R|84634|KISS1 receptor##AJ309020|KISS1R|84634|KISS1 receptor##AY029541|KISS1R|84634|KISS1 receptor##AY253981|KISS1R|84634|KISS1 receptor##EU883577|KISS1R|84634|KISS1 receptor##NM_138774|R3HDM4|91300|R3H domain containing 4##NM_024100|WDR18|57418|WD repeat domain 18##BC000040|WDR18|57418|WD repeat domain 18##BC001648|WDR18|57418|WD repeat domain 18##AY507106|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##AY507107|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_138690|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##DQ893224|C19orf6|91304|chromosome 19 open reading frame 6##DQ896554|C19orf6|91304|chromosome 19 open reading frame 6##BC008957|C19orf6|91304|chromosome 19 open reading frame 6##DQ005958|C19orf6|91304|chromosome 19 open reading frame 6	0.0	
chr21	38580603	38580739	reg1030485.p2	3.999	+	D83077 NM_003316	-125425	+	TSC_hg19_v1_chr21_+_38445570 AK297921 BC092466 NM_001001894 AK291992 AK299991	-135054	+	AB035742 AB037162 TSC_hg19_v1_chr21_-_38445400 NM_153682	-135248	-	BC029827 TSC_hg19_v1_chr21_+_38593064	12388	+	TSC_hg19_v1_chr21_-_38639617 AK316460 AK299662	58937	-	TSC_hg19_v1_chr21_-_38639642 AJ001867 AK300024 AK312707 D87343 NM_006052 AK303624	59157	-	D83077|TTC3|7267|tetratricopeptide repeat domain 3##NM_003316|TTC3|7267|tetratricopeptide repeat domain 3##AK297921|TTC3|7267|tetratricopeptide repeat domain 3##BC092466|TTC3|7267|tetratricopeptide repeat domain 3##NM_001001894|TTC3|7267|tetratricopeptide repeat domain 3##AK291992|TTC3|7267|tetratricopeptide repeat domain 3##AK299991|TTC3|7267|tetratricopeptide repeat domain 3##AB035742|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB037162|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##NM_153682|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##BC029827|DSCR9|257203|Down syndrome critical region gene 9 (non-protein coding)##AK316460|DSCR3|10311|Down syndrome critical region gene 3##AK299662|DSCR3|10311|Down syndrome critical region gene 3##AJ001867|DSCR3|10311|Down syndrome critical region gene 3##AK300024|DSCR3|10311|Down syndrome critical region gene 3##AK312707|DSCR3|10311|Down syndrome critical region gene 3##D87343|DSCR3|10311|Down syndrome critical region gene 3##NM_006052|DSCR3|10311|Down syndrome critical region gene 3##AK303624|DSCR3|10311|Down syndrome critical region gene 3	0.0	
chr2	36825652	36825768	reg1033662.p1	3.999	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	-428	-	AB209139 NM_016441 AF167706 BC111989 BC113371 AB384861	-242308	+	TSC_hg19_v1_chr2_+_36582920 AY358371	-242748	+	NM_001177969 NM_001177970 NM_001177971 NM_001177972 NM_053276 AK299426 TSC_hg19_v1_chr2_+_36923849	98136	+	TSC_hg19_v1_chr2_+_36923944 BC061519 AK056772 AK292149 AY358338 AL832679 AF063833 BC128260	98250	+	TSC_hg19_v1_chr2_-_37076016 BC015406	250320	-	AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB209139|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_016441|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AF167706|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC111989|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##BC113371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)##NM_001177969|VIT|5212|vitrin##NM_001177970|VIT|5212|vitrin##NM_001177971|VIT|5212|vitrin##NM_001177972|VIT|5212|vitrin##NM_053276|VIT|5212|vitrin##AK299426|VIT|5212|vitrin##BC061519|VIT|5212|vitrin##AK056772|VIT|5212|vitrin##AK292149|VIT|5212|vitrin##AY358338|VIT|5212|vitrin##AL832679|VIT|5212|vitrin##AF063833|VIT|5212|vitrin##BC128260|VIT|5212|vitrin##BC015406|STRN|6801|striatin, calmodulin binding protein	0.0	
chr2	7139158	7139225	reg1035283.p1	3.999	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-81604	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-121328	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-132488	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1683012	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1838528	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	2004630	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr5	118603723	118603860	reg1034415.p1	3.999	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	-196626	+	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	-196980	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	-279553	-	NM_001077654 TSC_hg19_v1_chr5_+_118604492 AK097884 AK001931	667	+	AF070671 TSC_hg19_v1_chr5_+_118604523	726	+	BC007014 NM_014350 BC005352 TSC_hg19_v1_chr5_+_118691687	87827	+	NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##NM_001077654|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK097884|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001931|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF070671|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC007014|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_014350|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC005352|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8	0.0	
chr5	77943905	77944066	reg1033508.p2	3.999	+	CR936660 TSC_hg19_v1_chr5_-_77845052	-98962	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-137789	-	D86961 BC136335 BC136336 AY309920 TSC_hg19_v1_chr5_-_77806179	-137931	-	TSC_hg19_v1_chr5_-_77944584 NM_005779	581	-	J05225 TSC_hg19_v1_chr5_-_78281101	337103	-	AK290865 TSC_hg19_v1_chr5_-_78281134	337148	-	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B	0.04223	
chr6	113955831	113956012	reg1029127.p1	3.999	+	AK122906 NM_001013734	-1287390	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1380026	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-1380116	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	222813	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	336351	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	336415	-	AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2	0.0	
chr6	151983230	151983322	reg1031889.p1	3.999	+	NM_025059 BC060803 BC035003 AK225330 AK026958	-168058	+	AK298490 TSC_hg19_v1_chr6_+_151773653 AK310840 AL110241 BC011348 CU679902	-209634	+	AK022972 NM_024573	-209855	+	NM_001122742 U68068 AK309580 AB588629 AB588630	28417	+	NM_001122741 AK293019 AK313644	143547	+	NM_001122740 U68067	145177	+	NM_025059|C6orf97|80129|chromosome 6 open reading frame 97##BC060803|C6orf97|80129|chromosome 6 open reading frame 97##BC035003|C6orf97|80129|chromosome 6 open reading frame 97##AK225330|C6orf97|80129|chromosome 6 open reading frame 97##AK026958|C6orf97|80129|chromosome 6 open reading frame 97##AK298490|C6orf211|79624|chromosome 6 open reading frame 211##AK310840|C6orf211|79624|chromosome 6 open reading frame 211##AL110241|C6orf211|79624|chromosome 6 open reading frame 211##BC011348|C6orf211|79624|chromosome 6 open reading frame 211##AK022972|C6orf211|79624|chromosome 6 open reading frame 211##NM_024573|C6orf211|79624|chromosome 6 open reading frame 211##NM_001122742|ESR1|2099|estrogen receptor 1##U68068|ESR1|2099|estrogen receptor 1##AK309580|ESR1|2099|estrogen receptor 1##AB588629|ESR1|2099|estrogen receptor 1##AB588630|ESR1|2099|estrogen receptor 1##NM_001122741|ESR1|2099|estrogen receptor 1##AK293019|ESR1|2099|estrogen receptor 1##AK313644|ESR1|2099|estrogen receptor 1##NM_001122740|ESR1|2099|estrogen receptor 1##U68067|ESR1|2099|estrogen receptor 1	0.019319	
chr7	47267441	47267519	reg1032280.p1	3.999	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-1306674	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-1334346	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-1339375	+	TSC_hg19_v1_chr7_-_47579207 BC071791	311729	-	TSC_hg19_v1_chr7_-_47621681 CR749644	354183	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	354303	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.091902	
chr1	160825546	160825722	reg1028173.p2	3.998	+	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	-59636	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-116570	+	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	-144048	-	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	6944	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	29324	-	HQ258193 AY065973 AY358905 NM_080878 BC117225 BC143339 BC143341	98925	-	NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)##HQ258193|ITLN2|142683|intelectin 2##AY065973|ITLN2|142683|intelectin 2##AY358905|ITLN2|142683|intelectin 2##NM_080878|ITLN2|142683|intelectin 2##BC117225|ITLN2|142683|intelectin 2##BC143339|ITLN2|142683|intelectin 2##BC143341|ITLN2|142683|intelectin 2	0.0	
chr14	71964597	71964777	reg1030964.p2	3.998	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-590236	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-590554	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-688878	-	AF090989 AF090990 NM_015556	31354	+	AK294895 NM_001204423	434129	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	434466	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.012618	
chr15	38975653	38975833	reg1005167.p1	3.998	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	-118812	-	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-229398	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	-430721	+	AK093014 AX747856 BC119016 BC119810 NM_207444	13055	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	567182	+	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	897586	+	EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1	0.0	
chr15	99320314	99320473	reg1026360.p2	3.998	+	TSC_hg19_v1_chr15_+_99192708 NM_000875 X04434 BC113610 BC113612 BC143721 AB463073 EU826611 EU826612 BC111788	-127637	+	TSC_hg19_v1_chr15_+_99191767 AB425196	-128422	+	AK097062 AK097062 NM_182562	-262783	-	BC104743 BC104744 BC105686 NM_001102612	228444	-	AK058162 NM_001167902	230630	-	TSC_hg19_v1_chr15_+_99645285 BC151243 AB002351 AJ310521 AJ310522 AJ697971 NM_015286 NM_145728 AF359284	324847	+	NM_000875|IGF1R|3480|insulin-like growth factor 1 receptor##X04434|IGF1R|3480|insulin-like growth factor 1 receptor##BC113610|IGF1R|3480|insulin-like growth factor 1 receptor##BC113612|IGF1R|3480|insulin-like growth factor 1 receptor##BC143721|IGF1R|3480|insulin-like growth factor 1 receptor##EU826611|IGF1R|3480|insulin-like growth factor 1 receptor##EU826612|IGF1R|3480|insulin-like growth factor 1 receptor##AB425196|IGF1R|3480|insulin-like growth factor 1 receptor##AK097062|FAM169B|283777|family with sequence similarity 169, member B##AK097062|FAM169B|283777|family with sequence similarity 169, member B##NM_182562|FAM169B|283777|family with sequence similarity 169, member B##BC104743|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC104744|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC105686|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001102612|PGPEP1L|145814|pyroglutamyl-peptidase I-like##AK058162|PGPEP1L|145814|pyroglutamyl-peptidase I-like##NM_001167902|PGPEP1L|145814|pyroglutamyl-peptidase I-like##BC151243|SYNM|23336|synemin, intermediate filament protein##AB002351|SYNM|23336|synemin, intermediate filament protein##AJ310521|SYNM|23336|synemin, intermediate filament protein##AJ310522|SYNM|23336|synemin, intermediate filament protein##AJ697971|SYNM|23336|synemin, intermediate filament protein##NM_015286|SYNM|23336|synemin, intermediate filament protein##NM_145728|SYNM|23336|synemin, intermediate filament protein##AF359284|SYNM|23336|synemin, intermediate filament protein	0.0	
chr17	43096734	43096868	reg1037627.p1	3.998	+	TSC_hg19_v1_chr17_-_43045715 BC008798 NM_006688	-51103	-	TSC_hg19_v1_chr17_-_43025057 NM_001080443	-71739	-	BC062609 AB463686 J04569 BC013596 AF419299 BC041765 AK128790 TSC_hg19_v1_chr17_-_42992869 AK098380 AK098758 AK222683 AK295734 AK296259 AK303728 S40719 AK315398 NM_001131019 NM_001242376 NM_002055	-103916	-	TSC_hg19_v1_chr17_-_43128979 AK290755 NM_001128631 AK026608	32128	-	TSC_hg19_v1_chr17_-_43138397 BC006472 BC006546 NM_024819	41611	-	TSC_hg19_v1_chr17_+_43138673 Y17208 Y17209	41856	+	BC008798|C1QL1|10882|complement component 1, q subcomponent-like 1##NM_006688|C1QL1|10882|complement component 1, q subcomponent-like 1##NM_001080443|KIF18B|146909|kinesin family member 18B##BC062609|GFAP|2670|glial fibrillary acidic protein##J04569|GFAP|2670|glial fibrillary acidic protein##BC013596|GFAP|2670|glial fibrillary acidic protein##AF419299|GFAP|2670|glial fibrillary acidic protein##BC041765|GFAP|2670|glial fibrillary acidic protein##AK128790|GFAP|2670|glial fibrillary acidic protein##AK098380|GFAP|2670|glial fibrillary acidic protein##AK098758|GFAP|2670|glial fibrillary acidic protein##AK222683|GFAP|2670|glial fibrillary acidic protein##AK295734|GFAP|2670|glial fibrillary acidic protein##AK296259|GFAP|2670|glial fibrillary acidic protein##AK303728|GFAP|2670|glial fibrillary acidic protein##S40719|GFAP|2670|glial fibrillary acidic protein##AK315398|GFAP|2670|glial fibrillary acidic protein##NM_001131019|GFAP|2670|glial fibrillary acidic protein##NM_001242376|GFAP|2670|glial fibrillary acidic protein##NM_002055|GFAP|2670|glial fibrillary acidic protein##AK290755|DCAKD|79877|dephospho-CoA kinase domain containing##NM_001128631|DCAKD|79877|dephospho-CoA kinase domain containing##AK026608|DCAKD|79877|dephospho-CoA kinase domain containing##BC006472|DCAKD|79877|dephospho-CoA kinase domain containing##BC006546|DCAKD|79877|dephospho-CoA kinase domain containing##NM_024819|DCAKD|79877|dephospho-CoA kinase domain containing##Y17208|NMT1|4836|N-myristoyltransferase 1##Y17209|NMT1|4836|N-myristoyltransferase 1	0.663794	CTCF.p2:-23:0.664
chr2	46782271	46782410	reg1037299.p1	3.998	+	TSC_hg19_v1_chr2_+_46769905 BC056154 BC070485 BC065291 BC093805 BC101806 AF498976 M31470 AB528045	-12302	+	TSC_hg19_v1_chr2_+_46769874 NM_012249 AK095329	-12491	+	BC034808 NM_080653	-35245	-	BC010864 D13435 TSC_hg19_v1_chr2_-_46844167 BC039303	61822	-	TSC_hg19_v1_chr2_-_46844187 BC021725 BC029408 AK291108 NM_002643 NM_173074	61877	-	TSC_hg19_v1_chr2_+_46844353 NM_014171 AK291298 AF161488 BC018653 BC006980 BC006979	62013	+	BC056154|RHOQ|23433|ras homolog gene family, member Q##BC070485|RHOQ|23433|ras homolog gene family, member Q##BC065291|RHOQ|23433|ras homolog gene family, member Q##BC093805|RHOQ|23433|ras homolog gene family, member Q##BC101806|RHOQ|23433|ras homolog gene family, member Q##AF498976|RHOQ|23433|ras homolog gene family, member Q##M31470|RHOQ|23433|ras homolog gene family, member Q##NM_012249|RHOQ|23433|ras homolog gene family, member Q##AK095329|RHOQ|23433|ras homolog gene family, member Q##BC034808|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_080653|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##D13435|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##BC021725|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##BC029408|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##AK291108|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##NM_002643|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##NM_173074|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F##NM_014171|CRIPT|9419|cysteine-rich PDZ-binding protein##AK291298|CRIPT|9419|cysteine-rich PDZ-binding protein##AF161488|CRIPT|9419|cysteine-rich PDZ-binding protein##BC018653|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006980|CRIPT|9419|cysteine-rich PDZ-binding protein##BC006979|CRIPT|9419|cysteine-rich PDZ-binding protein	0.799728	CTCF.p2:16:0.800
chr3	119114814	119114899	reg1028721.p1	3.998	+	TSC_hg19_v1_chr3_+_119013513 AK293726 BC112163 BC112165 AB384581 HQ258543	-101236	+	TSC_hg19_v1_chr3_+_119013229 AB033030 NM_020754	-101625	+	TSC_hg19_v1_chr3_-_118959726 AK001006 AK301688 AK314425 BX647468 CR749555 NM_003778 NM_212543	-155119	-	TSC_hg19_v1_chr3_-_119182462 BC003192 BC010070 BC021277 AK222950 AK223248 AK001764 NM_018266	67613	-	TSC_hg19_v1_chr3_+_119187809 NM_152305 AY298903 BC030614 AK295984 AK301002 AK315367 AK222937 AF168711 BC048810 AY358581 AK075444 BC011871 CU688946 CU690580	72969	+	NM_016589 TSC_hg19_v1_chr3_+_119217393 AF139077 AL136622 AK026250 AK225954 AF210057 AL390077 AY358633 AL390090 BC012341 AB528090 AM393632 CU680290 CR457158 CR533524	102617	+	AK293726|ARHGAP31|57514|Rho GTPase activating protein 31##BC112163|ARHGAP31|57514|Rho GTPase activating protein 31##BC112165|ARHGAP31|57514|Rho GTPase activating protein 31##HQ258543|ARHGAP31|57514|Rho GTPase activating protein 31##AB033030|ARHGAP31|57514|Rho GTPase activating protein 31##NM_020754|ARHGAP31|57514|Rho GTPase activating protein 31##AK001006|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK301688|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK314425|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BX647468|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##CR749555|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_003778|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_212543|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BC003192|TMEM39A|55254|transmembrane protein 39A##BC010070|TMEM39A|55254|transmembrane protein 39A##BC021277|TMEM39A|55254|transmembrane protein 39A##AK222950|TMEM39A|55254|transmembrane protein 39A##AK223248|TMEM39A|55254|transmembrane protein 39A##AK001764|TMEM39A|55254|transmembrane protein 39A##NM_018266|TMEM39A|55254|transmembrane protein 39A##NM_152305|POGLUT1|56983|protein O-glucosyltransferase 1##AY298903|POGLUT1|56983|protein O-glucosyltransferase 1##BC030614|POGLUT1|56983|protein O-glucosyltransferase 1##AK295984|POGLUT1|56983|protein O-glucosyltransferase 1##AK301002|POGLUT1|56983|protein O-glucosyltransferase 1##AK315367|POGLUT1|56983|protein O-glucosyltransferase 1##AK222937|POGLUT1|56983|protein O-glucosyltransferase 1##AF168711|POGLUT1|56983|protein O-glucosyltransferase 1##BC048810|POGLUT1|56983|protein O-glucosyltransferase 1##AY358581|POGLUT1|56983|protein O-glucosyltransferase 1##AK075444|POGLUT1|56983|protein O-glucosyltransferase 1##NM_016589|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF139077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL136622|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK026250|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK225954|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF210057|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AY358633|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390090|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##BC012341|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AM393632|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR457158|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR533524|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1	0.0	
chr5	157002411	157002488	reg1032118.p2	3.998	+	TSC_hg19_v1_chr5_+_156887210 AK026158 AK308830 AK309242	-115179	+	AK296972 NM_001099287 NM_001172292	-115423	+	TSC_hg19_v1_chr5_+_156820161 AK172724	-182261	+	AB462931 TSC_hg19_v1_chr5_-_157002728	267	-	AF311317 AF326918 TSC_hg19_v1_chr5_-_157002784 Y13786 AK091464 AK308182 AX747000 NM_033274	356	-	AB527685 TSC_hg19_v1_chr5_-_157079170	76679	-	AK026158|NIPAL4|348938|NIPA-like domain containing 4##AK308830|NIPAL4|348938|NIPA-like domain containing 4##AK309242|NIPAL4|348938|NIPA-like domain containing 4##AK296972|NIPAL4|348938|NIPA-like domain containing 4##NM_001099287|NIPAL4|348938|NIPA-like domain containing 4##NM_001172292|NIPAL4|348938|NIPA-like domain containing 4##AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF311317|ADAM19|8728|ADAM metallopeptidase domain 19##AF326918|ADAM19|8728|ADAM metallopeptidase domain 19##Y13786|ADAM19|8728|ADAM metallopeptidase domain 19##AK091464|ADAM19|8728|ADAM metallopeptidase domain 19##AK308182|ADAM19|8728|ADAM metallopeptidase domain 19##NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19	0.0	
chr6	143140708	143140783	reg1035940.p1	3.998	+	TSC_hg19_v1_chr6_+_142623443 BX640873	-517339	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-517676	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-630116	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	125583	-	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	241250	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	241291	+	BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1	0.0	
chr9	100881547	100881666	reg1029565.p1	3.998	+	TSC_hg19_v1_chr9_-_100881526 AK055833	-62	-	TSC_hg19_v1_chr9_-_100881503 AB529155 DQ893293 DQ896623 AF220130 AF220131 D50919 NM_014788 NM_033219 BC006333 NM_033220 AK292825	-121	-	TSC_hg19_v1_chr9_+_100819020 NM_018946 AK316608 BC000008 AK001659 BC019315 AF257466 CU676426 DQ892167 DQ895361	-62591	+	NM_003389	53567	-	TSC_hg19_v1_chr9_-_100954922 AK292788 BC011690 AB209809 NM_052820	73327	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	136115	-	AK055833|TRIM14|9830|tripartite motif containing 14##DQ893293|TRIM14|9830|tripartite motif containing 14##DQ896623|TRIM14|9830|tripartite motif containing 14##AF220130|TRIM14|9830|tripartite motif containing 14##AF220131|TRIM14|9830|tripartite motif containing 14##D50919|TRIM14|9830|tripartite motif containing 14##NM_014788|TRIM14|9830|tripartite motif containing 14##NM_033219|TRIM14|9830|tripartite motif containing 14##BC006333|TRIM14|9830|tripartite motif containing 14##NM_033220|TRIM14|9830|tripartite motif containing 14##AK292825|TRIM14|9830|tripartite motif containing 14##NM_018946|NANS|54187|N-acetylneuraminic acid synthase##AK316608|NANS|54187|N-acetylneuraminic acid synthase##BC000008|NANS|54187|N-acetylneuraminic acid synthase##AK001659|NANS|54187|N-acetylneuraminic acid synthase##BC019315|NANS|54187|N-acetylneuraminic acid synthase##AF257466|NANS|54187|N-acetylneuraminic acid synthase##DQ892167|NANS|54187|N-acetylneuraminic acid synthase##DQ895361|NANS|54187|N-acetylneuraminic acid synthase##NM_003389|CORO2A|7464|coronin, actin binding protein, 2A##AK292788|CORO2A|7464|coronin, actin binding protein, 2A##BC011690|CORO2A|7464|coronin, actin binding protein, 2A##AB209809|CORO2A|7464|coronin, actin binding protein, 2A##NM_052820|CORO2A|7464|coronin, actin binding protein, 2A##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2	0.038612	
chr11	30877030	30877195	reg1035999.p1	3.997	+	TSC_hg19_v1_chr11_-_30607762 AB209163 AK314833 NM_001145399	-269267	-	TSC_hg19_v1_chr11_-_30605748 AK309809	-271364	-	CU689190 NM_001584 U57911	-275133	-	BX647348 NM_020869	137120	-	AY247970 AK126066 NM_181807	514226	-	TSC_hg19_v1_chr11_+_31391404 NM_181706 AK123087 AL833128 AK289665 BC036571 BC044931 BC063804	514290	+	AB209163|MPPED2|744|metallophosphoesterase domain containing 2##AK314833|MPPED2|744|metallophosphoesterase domain containing 2##NM_001145399|MPPED2|744|metallophosphoesterase domain containing 2##AK309809|MPPED2|744|metallophosphoesterase domain containing 2##NM_001584|MPPED2|744|metallophosphoesterase domain containing 2##U57911|MPPED2|744|metallophosphoesterase domain containing 2##BX647348|DCDC5|100506627|doublecortin domain containing 5##NM_020869|DCDC5|100506627|doublecortin domain containing 5##AY247970|DCDC1|341019|doublecortin domain containing 1##NM_181807|DCDC1|341019|doublecortin domain containing 1##NM_181706|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK123087|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AL833128|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##AK289665|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC036571|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC044931|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24##BC063804|DNAJC24|120526|DnaJ (Hsp40) homolog, subfamily C, member 24	0.190111	
chr12	10396568	10396748	reg1036971.p2	3.997	+	AF287012 TSC_hg19_v1_chr12_+_10365506 AF087847 AK303581 AK315418 AK074195 BC028315 NM_031412 BC009309 AL136676 BX648781 BC008891	-31182	+	NM_153022 AY358845 AK055728	-65065	+	AB102861 AB590414 CU692540 DQ891409 DQ894585 AF035776 AK292124 AK295409 AK298040 BC022295 BC055085 AB010710 AK308009 NM_001172632 NM_001172633 NM_002543	-71926	-	AK291506 AY227806 NM_001114396	60388	+	NM_002262 NM_007334 AF498040 AF498041 AY327501 U30610 BC028009 AB009597 AJ000001	63874	+	BC039836 AK226161 AK292059 NM_007360	145976	-	AF287012|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AF087847|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK303581|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK315418|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AK074195|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC028315|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##NM_031412|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC009309|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##AL136676|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BX648781|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##BC008891|GABARAPL1|23710|GABA(A) receptor-associated protein like 1##NM_153022|C12orf59|120939|chromosome 12 open reading frame 59##AY358845|C12orf59|120939|chromosome 12 open reading frame 59##AK055728|C12orf59|120939|chromosome 12 open reading frame 59##AB102861|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##DQ891409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##DQ894585|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AF035776|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK292124|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK295409|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK298040|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##BC022295|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##BC055085|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AB010710|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK308009|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_001172632|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_001172633|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##NM_002543|OLR1|4973|oxidized low density lipoprotein (lectin-like) receptor 1##AK291506|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AY227806|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_001114396|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_002262|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##NM_007334|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AF498040|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AF498041|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AY327501|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##U30610|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##BC028009|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AB009597|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##AJ000001|KLRD1|3824|killer cell lectin-like receptor subfamily D, member 1##BC039836|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AK226161|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##AK292059|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1##NM_007360|KLRK1|22914|killer cell lectin-like receptor subfamily K, member 1	0.0	
chr16	30441851	30441977	reg1003557.p2	3.997	+	CR457335 TSC_hg19_v1_chr16_-_30441339 AK024843 AF212242 AF210430 AY453409 BC001344 NM_024096	-575	-	TSC_hg19_v1_chr16_+_30419371 AF242768	-22495	+	TSC_hg19_v1_chr16_+_30418926 BC026192 AK311157 AK001405 BC011870	-22873	+	BC016643 BC002381 U43286 TSC_hg19_v1_chr16_-_30457196 AK092003 AK303275 AX747304	15268	-	TSC_hg19_v1_chr16_-_30457197 AK093889 AX748354 NM_012248	15315	-	TSC_hg19_v1_chr16_+_30484003 NM_001114380 NM_002209 AX794822 AX794826 AK314246	42086	+	CR457335|DCTPP1|79077|dCTP pyrophosphatase 1##AK024843|DCTPP1|79077|dCTP pyrophosphatase 1##AF212242|DCTPP1|79077|dCTP pyrophosphatase 1##AF210430|DCTPP1|79077|dCTP pyrophosphatase 1##AY453409|DCTPP1|79077|dCTP pyrophosphatase 1##BC001344|DCTPP1|79077|dCTP pyrophosphatase 1##NM_024096|DCTPP1|79077|dCTP pyrophosphatase 1##AF242768|ZNF771|51333|zinc finger protein 771##BC026192|ZNF771|51333|zinc finger protein 771##BC011870|ZNF771|51333|zinc finger protein 771##BC016643|SEPHS2|22928|selenophosphate synthetase 2##BC002381|SEPHS2|22928|selenophosphate synthetase 2##U43286|SEPHS2|22928|selenophosphate synthetase 2##AK092003|SEPHS2|22928|selenophosphate synthetase 2##AK303275|SEPHS2|22928|selenophosphate synthetase 2##AK093889|SEPHS2|22928|selenophosphate synthetase 2##NM_012248|SEPHS2|22928|selenophosphate synthetase 2##NM_001114380|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##NM_002209|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK314246|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)	0.0	
chr21	35444910	35444986	reg1030866.p1	3.997	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-156856	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-254278	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-430093	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	893	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	981	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	291398	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.039933	
chr21	43813475	43813649	reg1025222.p2	3.997	+	M12075 BC032811 NM_003225 X00474 X52003	-26940	-	X51698 BC032820 NM_005423	-42424	-	NM_003226 AF432265	-77830	-	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	2599	-	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	10450	+	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	102818	-	M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2##NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)	0.0	
chr22	37257089	37257168	reg1034764.p2	3.997	+	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	-20	+	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	-41609	-	AL022729 TSC_hg19_v1_chr22_-_37172162 AK307105 AK307382 BC000566 AB209424 NM_001177701 NM_006860	-84973	-	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	52530	+	BC042635 CR456416 NM_001163857 NM_178552	146729	-	D87292 TSC_hg19_v1_chr22_-_37415489 AK091874 BC010148 AK000862 AK223521 AK301300 NM_003312	158353	-	BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##AL022729|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307105|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307382|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC000566|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AB209424|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177701|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_006860|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##BC042635|C22orf33|339669|chromosome 22 open reading frame 33##CR456416|C22orf33|339669|chromosome 22 open reading frame 33##NM_001163857|C22orf33|339669|chromosome 22 open reading frame 33##NM_178552|C22orf33|339669|chromosome 22 open reading frame 33##D87292|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK091874|TST|7263|thiosulfate sulfurtransferase (rhodanese)##BC010148|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK000862|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK223521|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK301300|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_003312|TST|7263|thiosulfate sulfurtransferase (rhodanese)	0.0	
chr2	70313362	70313542	reg1028861.p1	3.997	+	TSC_hg19_v1_chr2_-_70313405 AK056822	-44	-	AK055994 NM_152792	-124056	-	TSC_hg19_v1_chr2_+_70142307 L06895 BC113531 BC117260 BC143831 BC143832 BC144601 BC069377 BC069433 AB463858 CR536495 CR541692 CU686788 HQ258749	-171070	+	TSC_hg19_v1_chr2_-_70314146 BC040598	661	-	TSC_hg19_v1_chr2_+_70314613 NM_006196	1142	+	TSC_hg19_v1_chr2_+_70314696 U24223	1251	+	AK056822|PCBP1-AS1|400960|PCBP1 antisense RNA 1 (non-protein coding)##AK055994|ASPRV1|151516|aspartic peptidase, retroviral-like 1##NM_152792|ASPRV1|151516|aspartic peptidase, retroviral-like 1##L06895|MXD1|4084|MAX dimerization protein 1##BC113531|MXD1|4084|MAX dimerization protein 1##BC117260|MXD1|4084|MAX dimerization protein 1##BC143831|MXD1|4084|MAX dimerization protein 1##BC143832|MXD1|4084|MAX dimerization protein 1##BC144601|MXD1|4084|MAX dimerization protein 1##BC069377|MXD1|4084|MAX dimerization protein 1##BC069433|MXD1|4084|MAX dimerization protein 1##CR536495|MXD1|4084|MAX dimerization protein 1##CR541692|MXD1|4084|MAX dimerization protein 1##HQ258749|MXD1|4084|MAX dimerization protein 1##BC040598|PCBP1-AS1|400960|PCBP1 antisense RNA 1 (non-protein coding)##NM_006196|PCBP1|5093|poly(rC) binding protein 1##U24223|PCBP1|5093|poly(rC) binding protein 1	0.014897	
chr3	138003947	138004045	reg1031498.p1	3.997	+	TSC_hg19_v1_chr3_+_137906372 NM_014154 NM_015396 NM_213654 BC032661 AK296757 AK299769 AF161541 AK304558 AK296837 BC013424 AF109184 AK289577 BC041699	-97653	+	AF180919 TSC_hg19_v1_chr3_-_137893764 NM_016216	-110227	-	BC009472 TSC_hg19_v1_chr3_-_137893737 AK094147	-110267	-	AK094830 NM_178130	44731	-	NM_001252091 NM_012219 AK124954	62517	+	TSC_hg19_v1_chr3_+_138067476 NM_001085049 NM_001252093 BC047690 AF043938	63515	+	NM_014154|ARMC8|25852|armadillo repeat containing 8##NM_015396|ARMC8|25852|armadillo repeat containing 8##NM_213654|ARMC8|25852|armadillo repeat containing 8##BC032661|ARMC8|25852|armadillo repeat containing 8##AK296757|ARMC8|25852|armadillo repeat containing 8##AK299769|ARMC8|25852|armadillo repeat containing 8##AF161541|ARMC8|25852|armadillo repeat containing 8##AK304558|ARMC8|25852|armadillo repeat containing 8##AK296837|ARMC8|25852|armadillo repeat containing 8##BC013424|ARMC8|25852|armadillo repeat containing 8##AF109184|ARMC8|25852|armadillo repeat containing 8##AK289577|ARMC8|25852|armadillo repeat containing 8##BC041699|ARMC8|25852|armadillo repeat containing 8##AF180919|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##NM_016216|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##BC009472|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##AK094147|DBR1|51163|debranching enzyme homolog 1 (S. cerevisiae)##AK094830|NME9|347736|NME gene family member 9##NM_178130|NME9|347736|NME gene family member 9##NM_001252091|MRAS|22808|muscle RAS oncogene homolog##NM_012219|MRAS|22808|muscle RAS oncogene homolog##AK124954|MRAS|22808|muscle RAS oncogene homolog##NM_001085049|MRAS|22808|muscle RAS oncogene homolog##NM_001252093|MRAS|22808|muscle RAS oncogene homolog##BC047690|MRAS|22808|muscle RAS oncogene homolog##AF043938|MRAS|22808|muscle RAS oncogene homolog	0.046172	
chr6	41673998	41674139	reg1012542.p2	3.997	+	AJ608793 AJ608794 AJ608792 TSC_hg19_v1_chr6_-_41673723	-367	-	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	-67846	+	TSC_hg19_v1_chr6_+_41514342 BC052803	-159731	+	TSC_hg19_v1_chr6_-_41702787 AJ608787 BC032448 NM_007162	28697	-	M33782 TSC_hg19_v1_chr6_-_41703347	29278	-	TSC_hg19_v1_chr6_-_41703962 AK298390 AJ608786 NM_001167827	29904	-	AJ608793|TFEB|7942|transcription factor EB##AJ608794|TFEB|7942|transcription factor EB##AJ608792|TFEB|7942|transcription factor EB##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor##BC052803|FOXP4|116113|forkhead box P4##AJ608787|TFEB|7942|transcription factor EB##BC032448|TFEB|7942|transcription factor EB##NM_007162|TFEB|7942|transcription factor EB##M33782|TFEB|7942|transcription factor EB##AK298390|TFEB|7942|transcription factor EB##AJ608786|TFEB|7942|transcription factor EB##NM_001167827|TFEB|7942|transcription factor EB	0.02537	
chr8	142248684	142248817	reg1033997.p1	3.997	+	AK128212 NM_001080431	-10078	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-110013	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-237494	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	15440	-	NM_005293	128614	-	TSC_hg19_v1_chr8_+_142402120 AK311257	153384	+	AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.494933	CTCF.p2:-13:0.403
chr12	54121473	54121649	reg1030147.p2	3.996	+	AB040969 TSC_hg19_v1_chr12_-_54121231 AF370415 AY563137 BC003177 AY358397 AL136895 AK122773 AK222646 AK092788 AX747731 AK294424 AK296497 AK309199 AK027881 AK315578 NM_001143682 NM_020898	-307	-	NM_001002031	-51050	-	NM_005176	-51453	-	AF255676 NM_017410 BC090850 AF263466 BC002754 BT009908	211071	+	TSC_hg19_v1_chr12_+_54348683 AB464579 NM_173860	227137	+	NM_014212 AK291946 BC001543 AJ000041 CU674756	245406	+	AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1##BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001002031|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##NM_005176|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##AF255676|HOXC13|3229|homeobox C13##NM_017410|HOXC13|3229|homeobox C13##BC090850|HOXC13|3229|homeobox C13##AF263466|HOXC13|3229|homeobox C13##BC002754|HOXC13|3229|homeobox C13##BT009908|HOXC13|3229|homeobox C13##NM_173860|HOXC12|3228|homeobox C12##NM_014212|HOXC11|3227|homeobox C11##AK291946|HOXC11|3227|homeobox C11##BC001543|HOXC11|3227|homeobox C11##AJ000041|HOXC11|3227|homeobox C11	0.0	
chr14	69748589	69748687	reg1031035.p2	3.996	+	AK299588 TSC_hg19_v1_chr14_+_69726876 AB032956 BC122545 BC098578 AK315848 AK289745 BC036812 AB384119 AB078143 AJ505951	-21701	+	NM_001168368 NM_020692	-21958	+	AK292563 NM_001193362 NM_001193363 AK295601 BX161412	-90122	+	BC071709 TSC_hg19_v1_chr14_-_69865012 BC014301 AK130850 AK312186 D85758 NM_004450 U66871	116365	-	NM_001252151 NM_001252152 AK293222 AK316381 TSC_hg19_v1_chr14_+_69865137	116480	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	116757	+	AK299588|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AB032956|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC122545|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC098578|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK315848|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK289745|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC036812|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AB078143|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AJ505951|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##NM_001168368|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##NM_020692|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2##AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2##BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2##BC071709|ERH|2079|enhancer of rudimentary homolog (Drosophila)##BC014301|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK130850|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK312186|ERH|2079|enhancer of rudimentary homolog (Drosophila)##D85758|ERH|2079|enhancer of rudimentary homolog (Drosophila)##NM_004450|ERH|2079|enhancer of rudimentary homolog (Drosophila)##U66871|ERH|2079|enhancer of rudimentary homolog (Drosophila)##NM_001252151|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252152|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK293222|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK316381|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9	0.0	
chr16	4767520	4767613	reg1035931.p1	3.996	+	TSC_hg19_v1_chr16_+_4743721 BC006223 AK092642 AX747647 CU675299	-23848	+	AK315456 NM_001193452 NM_032349 TSC_hg19_v1_chr16_+_4743697	-23867	+	BC014199 TSC_hg19_v1_chr16_+_4714741	-52768	+	TSC_hg19_v1_chr16_-_4784249 AK123496 NM_133450 BC031350 BC050387 AK123371 AK301683 NM_001242929	16699	-	TSC_hg19_v1_chr16_+_4784272 NM_139170	16709	+	TSC_hg19_v1_chr16_+_4784320 AF447587 BC035024	16764	+	BC006223|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##AK092642|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##AK315456|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##NM_001193452|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##NM_032349|NUDT16L1|84309|nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1##BC014199|MGRN1|23295|mahogunin, ring finger 1##AK123496|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##NM_133450|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##BC031350|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##BC050387|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##AK123371|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##AK301683|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##NM_001242929|ANKS3|124401|ankyrin repeat and sterile alpha motif domain containing 3##NM_139170|C16orf71|146562|chromosome 16 open reading frame 71##AF447587|C16orf71|146562|chromosome 16 open reading frame 71##BC035024|C16orf71|146562|chromosome 16 open reading frame 71	0.0	
chr17	18804280	18804461	reg1032600.p2	3.996	+	NM_001243940 AB007851 BC101670 BC101672 BC143475	-35549	+	TSC_hg19_v1_chr17_+_18761445 BC106050 AK304544	-42900	+	NM_001243941 NM_002767 TSC_hg19_v1_chr17_+_18761443 AK313087	-42958	+	AK057946 NM_001042450 NM_152351 AK298345 BC062617 BC034380	51134	+	TSC_hg19_v1_chr17_-_18908078 NM_001039999	103709	-	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	145916	-	NM_001243940|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AB007851|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC101670|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC101672|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC143475|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC106050|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK304544|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##NM_001243941|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##NM_002767|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK313087|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK057946|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001042450|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_152351|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##AK298345|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC062617|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC034380|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein	0.0	
chr18	60978970	60979077	reg1036389.p1	3.996	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-183088	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-594715	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-595097	+	BC027258 NM_000633 NM_000657	7537	-	TSC_hg19_v1_chr18_-_60986977 X06487	7970	-	TSC_hg19_v1_chr18_-_60987309 M13994	8263	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr2	133206483	133206587	reg1032346.p1	3.996	+	AK122643 NM_001508	-32389	+	BC043584 NM_214461	-647302	-	AF038169 NM_013310	-726472	+	AY358628 BC017318 AK309849 AK075487 TSC_hg19_v1_chr2_-_133427783 AK130005 AK094501 AK123029	221168	-	NM_144586	221945	-	NM_001077427 AK309668	222575	-	AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##AY358628|LYPD1|116372|LY6/PLAUR domain containing 1##BC017318|LYPD1|116372|LY6/PLAUR domain containing 1##AK309849|LYPD1|116372|LY6/PLAUR domain containing 1##AK075487|LYPD1|116372|LY6/PLAUR domain containing 1##AK130005|LYPD1|116372|LY6/PLAUR domain containing 1##AK094501|LYPD1|116372|LY6/PLAUR domain containing 1##AK123029|LYPD1|116372|LY6/PLAUR domain containing 1##NM_144586|LYPD1|116372|LY6/PLAUR domain containing 1##NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1##AK309668|LYPD1|116372|LY6/PLAUR domain containing 1	0.205871	CTCF.p2:34:0.206
chr2	64853279	64853433	reg1023296.p3	3.996	+	TSC_hg19_v1_chr2_+_64751580 AL833962	-101754	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	-101872	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	-171708	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	27493	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	27691	-	TSC_hg19_v1_chr2_-_65090764 AK097952	237385	-	AL833962|AFTPH|54812|aftiphilin##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2	0.0	
chr1	45481853	45481966	reg1031177.p2	3.995	+	TSC_hg19_v1_chr1_+_45478442 AK293702	-3458	+	TSC_hg19_v1_chr1_+_45477917 AF104421 AF104422 AF104423 AF104424 AF104425 AF104426 AF104427 AF104428 AF104429 AF104430 AF104431 AF104432 AF104433 AF104434 AF104435 AF104436 AF104437 AF104438 AF104439 AF104440 AK295284 M14016 BX647308 AK225053 AK308996 DQ890688 DQ893870 AB529048 BT006737 CR456976 CR542057	-3983	+	TSC_hg19_v1_chr1_+_45477906 AK291877 AK309446 AK310208 AK309724 AK315878 BC001778	-4011	+	TSC_hg19_v1_chr1_-_45672278 AB040944 NM_020883	190342	-	TSC_hg19_v1_chr1_+_45769564 BC035497	287666	+	NM_032756 BC007293	310651	+	AK293702|UROD|7389|uroporphyrinogen decarboxylase##AF104421|UROD|7389|uroporphyrinogen decarboxylase##AF104422|UROD|7389|uroporphyrinogen decarboxylase##AF104423|UROD|7389|uroporphyrinogen decarboxylase##AF104424|UROD|7389|uroporphyrinogen decarboxylase##AF104425|UROD|7389|uroporphyrinogen decarboxylase##AF104426|UROD|7389|uroporphyrinogen decarboxylase##AF104427|UROD|7389|uroporphyrinogen decarboxylase##AF104428|UROD|7389|uroporphyrinogen decarboxylase##AF104429|UROD|7389|uroporphyrinogen decarboxylase##AF104430|UROD|7389|uroporphyrinogen decarboxylase##AF104431|UROD|7389|uroporphyrinogen decarboxylase##AF104432|UROD|7389|uroporphyrinogen decarboxylase##AF104433|UROD|7389|uroporphyrinogen decarboxylase##AF104434|UROD|7389|uroporphyrinogen decarboxylase##AF104435|UROD|7389|uroporphyrinogen decarboxylase##AF104436|UROD|7389|uroporphyrinogen decarboxylase##AF104437|UROD|7389|uroporphyrinogen decarboxylase##AF104438|UROD|7389|uroporphyrinogen decarboxylase##AF104439|UROD|7389|uroporphyrinogen decarboxylase##AF104440|UROD|7389|uroporphyrinogen decarboxylase##AK295284|UROD|7389|uroporphyrinogen decarboxylase##M14016|UROD|7389|uroporphyrinogen decarboxylase##BX647308|UROD|7389|uroporphyrinogen decarboxylase##AK225053|UROD|7389|uroporphyrinogen decarboxylase##AK308996|UROD|7389|uroporphyrinogen decarboxylase##DQ890688|UROD|7389|uroporphyrinogen decarboxylase##DQ893870|UROD|7389|uroporphyrinogen decarboxylase##BT006737|UROD|7389|uroporphyrinogen decarboxylase##CR456976|UROD|7389|uroporphyrinogen decarboxylase##CR542057|UROD|7389|uroporphyrinogen decarboxylase##AK291877|UROD|7389|uroporphyrinogen decarboxylase##AK309446|UROD|7389|uroporphyrinogen decarboxylase##AK310208|UROD|7389|uroporphyrinogen decarboxylase##AK309724|UROD|7389|uroporphyrinogen decarboxylase##AK315878|UROD|7389|uroporphyrinogen decarboxylase##BC001778|UROD|7389|uroporphyrinogen decarboxylase##AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5##NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5##BC035497|LOC400752|400752|uncharacterized LOC400752##NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like	0.0	
chr15	75248629	75248729	reg1033904.p1	3.995	+	TSC_hg19_v1_chr15_-_75230386 AK026623 BC024240 NM_004255	-18239	-	CR407649 DQ987236 DQ987237 DQ893584 DQ896832 TSC_hg19_v1_chr15_-_75230377 M22760 AK026615	-18310	-	NM_020447	-49218	-	CU675593 AY034074 BC002497 BC007270 TSC_hg19_v1_chr15_-_75249114	345	-	AK000381 NM_017793	1095	-	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	39228	+	AK026623|COX5A|9377|cytochrome c oxidase subunit Va##BC024240|COX5A|9377|cytochrome c oxidase subunit Va##NM_004255|COX5A|9377|cytochrome c oxidase subunit Va##CR407649|COX5A|9377|cytochrome c oxidase subunit Va##DQ987236|COX5A|9377|cytochrome c oxidase subunit Va##DQ987237|COX5A|9377|cytochrome c oxidase subunit Va##DQ893584|COX5A|9377|cytochrome c oxidase subunit Va##DQ896832|COX5A|9377|cytochrome c oxidase subunit Va##M22760|COX5A|9377|cytochrome c oxidase subunit Va##AK026615|COX5A|9377|cytochrome c oxidase subunit Va##NM_020447|C15orf17|57184|chromosome 15 open reading frame 17##AY034074|RPP25|54913|ribonuclease P/MRP 25kDa subunit##BC002497|RPP25|54913|ribonuclease P/MRP 25kDa subunit##BC007270|RPP25|54913|ribonuclease P/MRP 25kDa subunit##AK000381|RPP25|54913|ribonuclease P/MRP 25kDa subunit##NM_017793|RPP25|54913|ribonuclease P/MRP 25kDa subunit##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5	0.012588	
chr19	49063593	49063739	reg1035197.p1	3.995	+	TSC_hg19_v1_chr19_+_49055432 NM_177973 U92315 BC034694 CU689942	-8202	+	AB067470 NM_001080434	-47235	-	AB384647 TSC_hg19_v1_chr19_-_49014849	-48826	-	NM_004605	15326	+	AF353721 NM_133498 AY358387 BC047334	46343	+	BC111970 BC111972 NM_017708 AK000207	53089	-	NM_177973|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##U92315|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##BC034694|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##AB067470|LMTK3|114783|lemur tyrosine kinase 3##NM_001080434|LMTK3|114783|lemur tyrosine kinase 3##NM_004605|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##AF353721|SPACA4|171169|sperm acrosome associated 4##NM_133498|SPACA4|171169|sperm acrosome associated 4##AY358387|SPACA4|171169|sperm acrosome associated 4##BC047334|SPACA4|171169|sperm acrosome associated 4##BC111970|FAM83E|54854|family with sequence similarity 83, member E##BC111972|FAM83E|54854|family with sequence similarity 83, member E##NM_017708|FAM83E|54854|family with sequence similarity 83, member E##AK000207|FAM83E|54854|family with sequence similarity 83, member E	0.150165	
chr20	52353906	52354086	reg1024312.p2	3.995	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-143197	-	AF041259 NM_006526	-154361	-	AK302570 NM_001193421	-552175	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	333066	-	AK315220 NM_003657	333307	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	436524	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr3	152094536	152094711	reg1025534.p1	3.995	+	AY358260 NM_001123228	-35845	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-77430	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	-107278	-	NM_002563 Z49205	458112	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	785403	+	TSC_hg19_v1_chr3_+_152880058 BC012362	785425	+	AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family	0.0	
chr3	180707438	180707525	reg1040845.p1	3.995	+	NM_001190233 TSC_hg19_v1_chr3_-_180707525 AK311765 BC073989 BC009702 AK309019 AK307097 NM_145261	-48	-	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	-77003	+	TSC_hg19_v1_chr3_+_180630246 NM_001013438 NM_001013439 NM_005087	-77298	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	709911	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	722232	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	722657	+	NM_001190233|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK311765|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC073989|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC009702|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK307097|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##NM_145261|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013438|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013439|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_005087|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2	0.0	
chr4	89627764	89627869	reg1034918.p1	3.995	+	BC104883 TSC_hg19_v1_chr4_-_89618996 AL834329 AK054689 BC022544 NM_153757	-8841	-	AK296379 TSC_hg19_v1_chr4_+_89513611 AK289990 BC038960 D25215 NM_014606	-114195	+	TSC_hg19_v1_chr4_-_89444931 NM_001042616 NM_032906	-182864	-	AB385402 AB020721 TSC_hg19_v1_chr4_-_89744384 AK027138 BC033006 BC086875 BC058029 AK296932 NM_001015045 AK091787 AX747185	116465	-	CU687656 BC063126 BC041029 BC053569 BX647410 NM_014883	350403	-	AK091881 AX747234 TSC_hg19_v1_chr4_-_90032571	404743	-	BC104883|NAP1L5|266812|nucleosome assembly protein 1-like 5##AL834329|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK054689|NAP1L5|266812|nucleosome assembly protein 1-like 5##BC022544|NAP1L5|266812|nucleosome assembly protein 1-like 5##NM_153757|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK296379|HERC3|8916|hect domain and RLD 3##AK289990|HERC3|8916|hect domain and RLD 3##BC038960|HERC3|8916|hect domain and RLD 3##D25215|HERC3|8916|hect domain and RLD 3##NM_014606|HERC3|8916|hect domain and RLD 3##NM_001042616|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_032906|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AB020721|FAM13A|10144|family with sequence similarity 13, member A##AK027138|FAM13A|10144|family with sequence similarity 13, member A##BC033006|FAM13A|10144|family with sequence similarity 13, member A##BC086875|FAM13A|10144|family with sequence similarity 13, member A##BC058029|FAM13A|10144|family with sequence similarity 13, member A##AK296932|FAM13A|10144|family with sequence similarity 13, member A##NM_001015045|FAM13A|10144|family with sequence similarity 13, member A##AK091787|FAM13A|10144|family with sequence similarity 13, member A##BC063126|FAM13A|10144|family with sequence similarity 13, member A##BC041029|FAM13A|10144|family with sequence similarity 13, member A##BC053569|FAM13A|10144|family with sequence similarity 13, member A##BX647410|FAM13A|10144|family with sequence similarity 13, member A##NM_014883|FAM13A|10144|family with sequence similarity 13, member A##AK091881|FAM13A|10144|family with sequence similarity 13, member A	0.0	
chr5	17225254	17225351	reg1034021.p1	3.995	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-7462	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-7690	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-288917	-	AK295087 BC031051 NM_001167667 NM_004934	2763020	-	TSC_hg19_v1_chr5_+_21459621 AK290693	4234307	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	4234346	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.0	
chr6_apd_hap1	1821039	1821105	reg1034660.p1	3.995	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.95208	CTCF.p2:-19:0.952
chr9	95056108	95056267	reg1031038.p2	3.995	+	TSC_hg19_v1_chr9_-_95055999 NM_002161	-174	-	TSC_hg19_v1_chr9_-_95055986 AK301272	-201	-	U04953 TSC_hg19_v1_chr9_-_95055976 BX647236 AK308202 BX647430 NM_013417 BX537417 BX537429 BX538109 BX647071 BX648567	-212	-	CR627363 TSC_hg19_v1_chr9_-_95087631 BC008491 AK001049 AK307408 BC146810 AK297355	31438	-	NM_001012267	31553	+	AB105104 NM_017948	31669	-	NM_002161|IARS|3376|isoleucyl-tRNA synthetase##AK301272|IARS|3376|isoleucyl-tRNA synthetase##U04953|IARS|3376|isoleucyl-tRNA synthetase##BX647236|IARS|3376|isoleucyl-tRNA synthetase##AK308202|IARS|3376|isoleucyl-tRNA synthetase##BX647430|IARS|3376|isoleucyl-tRNA synthetase##NM_013417|IARS|3376|isoleucyl-tRNA synthetase##BX537417|IARS|3376|isoleucyl-tRNA synthetase##BX537429|IARS|3376|isoleucyl-tRNA synthetase##BX538109|IARS|3376|isoleucyl-tRNA synthetase##BX647071|IARS|3376|isoleucyl-tRNA synthetase##BX648567|IARS|3376|isoleucyl-tRNA synthetase##CR627363|NOL8|55035|nucleolar protein 8##BC008491|NOL8|55035|nucleolar protein 8##AK001049|NOL8|55035|nucleolar protein 8##AK307408|NOL8|55035|nucleolar protein 8##BC146810|NOL8|55035|nucleolar protein 8##AK297355|NOL8|55035|nucleolar protein 8##NM_001012267|CENPP|401541|centromere protein P##AB105104|NOL8|55035|nucleolar protein 8##NM_017948|NOL8|55035|nucleolar protein 8	0.012036	
chr12	95034433	95034532	reg1035659.p2	3.994	+	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-180750	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-180840	-	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	-180951	-	EU831778 EU831856 BC040535 NM_020698	9782	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	362988	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	363034	-	BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	0.0	
chr1	38992921	38993101	reg1031544.p1	3.994	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-480562	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-514581	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-514626	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	332375	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	346005	-	AK312811 BC051675 AK123051 NM_030772	354266	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.0	
chr15	62941255	62941421	reg1029546.p1	3.994	+	AF402000 NM_015059	-1829	+	TSC_hg19_v1_chr15_+_62682748 AB621808	-258620	+	NM_001007595	-483857	-	TSC_hg19_v1_chr15_+_63050761 BX648144 BX648146	109436	+	TSC_hg19_v1_chr15_+_63334949 NM_000366 NM_001018004 NM_001018005 NM_001018006 NM_001018007 NM_001018020 AK092051 AX747334 BC007433 AK057989 AK299387 AK129882 AK131384 AK309170 AL050179 M19713 DQ893259 DQ896588 CU675655 AY640414 AY640415	393564	+	M19714 TSC_hg19_v1_chr15_+_63335095	393752	+	AF402000|TLN2|83660|talin 2##NM_015059|TLN2|83660|talin 2##AB621808|TLN2|83660|talin 2##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B##BX648144|TLN2|83660|talin 2##BX648146|TLN2|83660|talin 2##NM_000366|TPM1|7168|tropomyosin 1 (alpha)##NM_001018004|TPM1|7168|tropomyosin 1 (alpha)##NM_001018005|TPM1|7168|tropomyosin 1 (alpha)##NM_001018006|TPM1|7168|tropomyosin 1 (alpha)##NM_001018007|TPM1|7168|tropomyosin 1 (alpha)##NM_001018020|TPM1|7168|tropomyosin 1 (alpha)##AK092051|TPM1|7168|tropomyosin 1 (alpha)##BC007433|TPM1|7168|tropomyosin 1 (alpha)##AK057989|TPM1|7168|tropomyosin 1 (alpha)##AK299387|TPM1|7168|tropomyosin 1 (alpha)##AK129882|TPM1|7168|tropomyosin 1 (alpha)##AK131384|TPM1|7168|tropomyosin 1 (alpha)##AK309170|TPM1|7168|tropomyosin 1 (alpha)##AL050179|TPM1|7168|tropomyosin 1 (alpha)##M19713|TPM1|7168|tropomyosin 1 (alpha)##DQ893259|TPM1|7168|tropomyosin 1 (alpha)##DQ896588|TPM1|7168|tropomyosin 1 (alpha)##AY640414|TPM1|7168|tropomyosin 1 (alpha)##AY640415|TPM1|7168|tropomyosin 1 (alpha)##M19714|TPM1|7168|tropomyosin 1 (alpha)	0.0	
chr18	72519178	72519309	reg1034932.p1	3.994	+	NM_001146189 NM_001146190 NM_017757	-176325	+	TSC_hg19_v1_chr18_+_72265126 AK056288	-254112	+	TSC_hg19_v1_chr18_-_72265072 BC036588	-254183	-	TSC_hg19_v1_chr18_-_72920993 CU687330 CU689738	401758	-	TSC_hg19_v1_chr18_-_72921059 AK292880 BC078661 BC033780	401869	-	BC018081 NM_175907 TSC_hg19_v1_chr18_-_72921324	402062	-	NM_001146189|ZNF407|55628|zinc finger protein 407##NM_001146190|ZNF407|55628|zinc finger protein 407##NM_017757|ZNF407|55628|zinc finger protein 407##AK056288|ZNF407|55628|zinc finger protein 407##BC036588|LOC400657|400657|uncharacterized LOC400657##AK292880|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC078661|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC033780|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##BC018081|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2##NM_175907|ZADH2|284273|zinc binding alcohol dehydrogenase domain containing 2	0.0	
chr2	238814761	238814941	reg1037591.p1	3.994	+	NM_005855 TSC_hg19_v1_chr2_+_238768265 AJ001014 BC000548 DQ891905 DQ895091 AY265457 CR542032 CR542044	-46599	+	NM_001080504 TSC_hg19_v1_chr2_+_238707424 BX648107	-107431	+	TSC_hg19_v1_chr2_+_238601052 EU832771 EU832772 GQ129315 GQ129316	-213776	+	NM_080678 TSC_hg19_v1_chr2_+_238875655 AK002119 AK293334 AK297502 AK303094	60773	+	TSC_hg19_v1_chr2_+_238875673 AK290063	60829	+	TSC_hg19_v1_chr2_+_238875689 BC010549 AK294107	60852	+	NM_005855|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##AJ001014|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##BC000548|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##DQ891905|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##DQ895091|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##AY265457|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##CR542032|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##CR542044|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##NM_001080504|RBM44|375316|RNA binding motif protein 44##BX648107|RBM44|375316|RNA binding motif protein 44##EU832771|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##EU832772|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129315|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129316|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_080678|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK293334|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK297502|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK303094|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK290063|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##BC010549|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK294107|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)	0.0	
chr2	91947662	91947786	reg1033740.p2	3.994	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-99721	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-1736006	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-1869970	+	AK097438 BC021716 NM_144705 AK296678 CU692394	3589526	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	3743758	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	3839818	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.973443	CTCF.p2:0:0.973
chr3	127465438	127465504	reg1031812.p1	3.994	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-73654	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-117439	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-148187	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	75959	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	76671	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	168847	+	NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.0	
chr4	55595902	55595971	reg1042000.p2	3.994	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	-71802	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-500472	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-500656	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	395818	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	616480	+	TSC_hg19_v1_chr4_+_56212475 CU677982 CR457312	616548	+	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3##CR457312|SRD5A3|79644|steroid 5 alpha-reductase 3	0.0	
chr5	1494689	1494764	reg1024375.p1	3.994	+	S46955 EF174603 M95167 NM_001044	-49200	-	AB045223 DQ892147 DQ895343 AK027306 BC025305 NM_030782 TSC_hg19_v1_chr5_-_1345095	-149704	-	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	-199635	-	CU676500 BC020166 AK090444 TSC_hg19_v1_chr5_-_1494996	208	-	TSC_hg19_v1_chr5_-_1523908 AB244719 AB463849	29208	-	TSC_hg19_v1_chr5_-_1524086 NM_024830	29336	-	S46955|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##EF174603|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##M95167|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##NM_001044|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##AB045223|CLPTM1L|81037|CLPTM1-like##DQ892147|CLPTM1L|81037|CLPTM1-like##DQ895343|CLPTM1L|81037|CLPTM1-like##AK027306|CLPTM1L|81037|CLPTM1-like##BC025305|CLPTM1L|81037|CLPTM1-like##NM_030782|CLPTM1L|81037|CLPTM1-like##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase##BC020166|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AK090444|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AB244719|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##NM_024830|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1	0.060682	
chr11	76907039	76907123	reg1012370.p2	3.993	+	TSC_hg19_v1_chr11_+_76883833 BC023212	-23233	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	-67753	+	CU686775 BC069115 BC069365 NM_006189	-93197	+	AY313782 AY326450 NM_182833	91381	-	TSC_hg19_v1_chr11_-_77122998 AK296006 AK055228	215918	-	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	277751	-	BC023212|MYO7A|4647|myosin VIIA##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA##BC069115|OMP|4975|olfactory marker protein##BC069365|OMP|4975|olfactory marker protein##NM_006189|OMP|4975|olfactory marker protein##AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AK296006|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK055228|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1	0.865087	
chr1	203185002	203185170	reg1005210.p1	3.993	+	TSC_hg19_v1_chr1_-_203155913 NM_001276	-29160	-	BC008568 TSC_hg19_v1_chr1_-_203155877 AK312911	-29198	-	TSC_hg19_v1_chr1_-_203155832 AK225266 AK225584 AK130142 AK130200	-29255	-	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	13729	-	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	89603	+	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	132298	-	NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK225266|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK225584|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK130142|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK130200|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin	0.0	
chr1	238397388	238397527	reg1031248.p2	3.993	+	AK314151 NM_021186	-343236	-	NM_001035 X98330 Y08218	-1191684	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-1438622	+	TSC_hg19_v1_chr1_+_239550016 AK056349	1152485	+	AF279779 NM_000740	1394915	+	TSC_hg19_v1_chr1_+_240255182 NM_020066	1857720	+	AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_020066|FMN2|56776|formin 2	0.030023	
chr13	40586434	40586556	reg1038748.p2	3.993	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-356634	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-409133	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-409168	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	654217	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	758797	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	758837	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.879857	CTCF.p2:18:0.880
chr1	40071771	40071917	reg1003259.p1	3.993	+	TSC_hg19_v1_chr1_-_40042519 NM_001135653 NM_001135654 NM_003819	-29325	-	BC094755 TSC_hg19_v1_chr1_-_40042463	-29368	-	U75686 BC065540 TSC_hg19_v1_chr1_-_40042460 BC071591	-29407	-	TSC_hg19_v1_chr1_-_40098640 AK300463	26811	-	AF311885 EU446871 TSC_hg19_v1_chr1_-_40105307 AB463718 AJ272215 BC006087	33472	-	TSC_hg19_v1_chr1_-_40105343 NM_014571	33501	-	NM_001135653|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##NM_001135654|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##NM_003819|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC094755|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##U75686|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC065540|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC071591|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##AK300463|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AF311885|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##EU446871|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##AJ272215|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##BC006087|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like##NM_014571|HEYL|26508|hairy/enhancer-of-split related with YRPW motif-like	0.0	
chr14	48008520	48008624	reg1035693.p1	3.993	+	BC028193 NM_182830	-196157	-	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	-887589	-	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-2285926	-	AK309211 NM_001113498	135584	-	BC032813 BC035313 L31610 U14973 AK026649 BC015974 NM_001030001 NM_001032 AB055780 AK307833 TSC_hg19_v1_chr14_-_50053095	2044521	-	NM_152329 NM_203467 TSC_hg19_v1_chr14_+_50065473 BC030142 BX648029	2056888	+	BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##BC032813|RPS29|6235|ribosomal protein S29##BC035313|RPS29|6235|ribosomal protein S29##L31610|RPS29|6235|ribosomal protein S29##U14973|RPS29|6235|ribosomal protein S29##AK026649|RPS29|6235|ribosomal protein S29##BC015974|RPS29|6235|ribosomal protein S29##NM_001030001|RPS29|6235|ribosomal protein S29##NM_001032|RPS29|6235|ribosomal protein S29##AB055780|RPS29|6235|ribosomal protein S29##NM_152329|LRR1|122769|leucine rich repeat protein 1##NM_203467|LRR1|122769|leucine rich repeat protein 1##BC030142|LRR1|122769|leucine rich repeat protein 1##BX648029|LRR1|122769|leucine rich repeat protein 1	0.996083	CTCF.p2:7:0.996
chr15	31684748	31684898	reg1027598.p2	3.993	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-65485	+	NM_001243538	-161774	-	GQ502181 HM135791 NM_001252020	-231395	-	AJ430383 NM_130901	262718	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	478006	-	TSC_hg19_v1_chr15_-_32162898 AK126002	478120	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr1	66912346	66912418	reg1009402.p2	3.993	+	TSC_hg19_v1_chr1_+_66798096 AK294441	-114287	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	-114529	+	AB209081 NM_001037340 AK290006	-453979	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	87502	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	305742	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	305783	+	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1	0.986617	
chr16	73050374	73050554	reg1031365.p2	3.993	+	TSC_hg19_v1_chr16_-_72991733 BC029653	-58759	-	TSC_hg19_v1_chr16_+_72699031 AK021563	-351400	+	AK122925 NM_001160213	-844116	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	31757	-	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	42122	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	1280229	+	BC029653|ZFHX3|463|zinc finger homeobox 3##AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.0	
chr17	37248690	37248818	reg1030778.p1	3.993	+	BC140879 BC140880 NM_001008777 AY700575	-125115	-	TSC_hg19_v1_chr17_+_37026351 X82456 BC012460 DQ891539 DQ894728 AB463833 CU675705 AK289847	-222358	+	TSC_hg19_v1_chr17_+_37026313 AK295522 AK296092 AK309933 BC007560	-222440	+	EU832116 EU832210 AK312999 TSC_hg19_v1_chr17_-_37307740 AF279144 AF378753 AY704670 AY704671	58978	-	TSC_hg19_v1_chr17_-_37307863 BC036059	59093	-	TSC_hg19_v1_chr17_-_37307891 NM_020405	59141	-	BC140879|FBXO47|494188|F-box protein 47##BC140880|FBXO47|494188|F-box protein 47##NM_001008777|FBXO47|494188|F-box protein 47##AY700575|FBXO47|494188|F-box protein 47##X82456|LASP1|3927|LIM and SH3 protein 1##BC012460|LASP1|3927|LIM and SH3 protein 1##DQ891539|LASP1|3927|LIM and SH3 protein 1##DQ894728|LASP1|3927|LIM and SH3 protein 1##AK289847|LASP1|3927|LIM and SH3 protein 1##AK295522|LASP1|3927|LIM and SH3 protein 1##AK296092|LASP1|3927|LIM and SH3 protein 1##AK309933|LASP1|3927|LIM and SH3 protein 1##BC007560|LASP1|3927|LIM and SH3 protein 1##EU832116|PLXDC1|57125|plexin domain containing 1##EU832210|PLXDC1|57125|plexin domain containing 1##AK312999|PLXDC1|57125|plexin domain containing 1##AF279144|PLXDC1|57125|plexin domain containing 1##AF378753|PLXDC1|57125|plexin domain containing 1##AY704670|PLXDC1|57125|plexin domain containing 1##AY704671|PLXDC1|57125|plexin domain containing 1##BC036059|PLXDC1|57125|plexin domain containing 1##NM_020405|PLXDC1|57125|plexin domain containing 1	0.0	
chr21	38869433	38869543	reg1033880.p1	3.993	+	NM_130438 NM_001396 U52373 D85759 U58496	-76868	+	D86550 NM_130436	-78282	+	AF108830 NM_101395 AB015283 AB015284	-129618	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	419223	-	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	623913	-	BC013327 NM_002243	759175	+	NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.636681	CTCF.p2:-20:0.464
chr5	151100793	151100973	reg1032495.p2	3.993	+	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	-34375	-	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	-34422	-	AF231022 NM_001447	-152379	-	TSC_hg19_v1_chr5_-_151138170 AK091843 AX747215 NM_004045 AK293063 BC112248 BC112250	37332	-	TSC_hg19_v1_chr5_-_151150991 AB593120	50090	-	TSC_hg19_v1_chr5_+_151151479 BX648012 NM_005754 NM_198395	50589	+	AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##AK091843|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##NM_004045|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AK293063|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112248|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112250|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AB593120|LOC100652758|100652758|uncharacterized LOC100652758##BX648012|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_005754|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_198395|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1	0.0	
chr8	144649503	144649683	reg1033729.p1	3.993	+	NM_024736 AY008304 BC008904 TSC_hg19_v1_chr8_+_144640515 AK303615 AK022212 AK123985 AK096216 BC069000	-9087	+	AK291817 NM_001166237	-14037	+	TSC_hg19_v1_chr8_-_144623640 NM_015117	-25961	-	TSC_hg19_v1_chr8_-_144650884 AF289596	1310	-	TSC_hg19_v1_chr8_-_144651064 AK292180	1462	-	TSC_hg19_v1_chr8_-_144654943 NM_001100878	5340	-	NM_024736|GSDMD|79792|gasdermin D##AY008304|GSDMD|79792|gasdermin D##BC008904|GSDMD|79792|gasdermin D##AK303615|GSDMD|79792|gasdermin D##AK022212|GSDMD|79792|gasdermin D##AK123985|GSDMD|79792|gasdermin D##AK096216|GSDMD|79792|gasdermin D##BC069000|GSDMD|79792|gasdermin D##AK291817|GSDMD|79792|gasdermin D##NM_001166237|GSDMD|79792|gasdermin D##NM_015117|ZC3H3|23144|zinc finger CCCH-type containing 3##AF289596|C8orf73|642475|chromosome 8 open reading frame 73##AK292180|C8orf73|642475|chromosome 8 open reading frame 73##NM_001100878|C8orf73|642475|chromosome 8 open reading frame 73	0.721744	CTCF.p2:-24:0.722
chr8	25946546	25946726	reg1001412.p2	3.993	+	BC137106 BC137107 NM_022659 TSC_hg19_v1_chr8_-_25902675 AK001144	-43970	-	TSC_hg19_v1_chr8_+_25316748 AK299278 AL833627 BC015691 BC104450 BC104451	-629802	+	AK292505 TSC_hg19_v1_chr8_+_25316724	-629914	+	TSC_hg19_v1_chr8_+_26149035 NM_002717	202385	+	AK314823 TSC_hg19_v1_chr8_+_26149043 BC041071	202413	+	TSC_hg19_v1_chr8_+_26149092 M64929 AY189686	202558	+	BC137106|EBF2|64641|early B-cell factor 2##BC137107|EBF2|64641|early B-cell factor 2##NM_022659|EBF2|64641|early B-cell factor 2##AK001144|EBF2|64641|early B-cell factor 2##AK299278|CDCA2|157313|cell division cycle associated 2##AL833627|CDCA2|157313|cell division cycle associated 2##BC015691|CDCA2|157313|cell division cycle associated 2##BC104450|CDCA2|157313|cell division cycle associated 2##BC104451|CDCA2|157313|cell division cycle associated 2##AK292505|CDCA2|157313|cell division cycle associated 2##NM_002717|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AK314823|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##BC041071|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##M64929|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AY189686|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha	0.0	
chr1	226850679	226850860	reg1027268.p2	3.992	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-114152	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-114268	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-254966	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	76169	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	207511	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	277177	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.0	
chr14	93170781	93170903	reg1033411.p1	3.992	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	-52019	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	-52206	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-190883	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	44117	-	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	89844	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	218602	+	AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)	0.026046	
chr15	33601917	33602042	reg1018657.p2	3.992	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-241744	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-590813	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-591722	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	1190	+	TSC_hg19_v1_chr15_-_34212524 BC037796	610579	-	AK095198 NM_012125	659109	+	NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5	0.935006	CTCF.p2:53:0.935
chr18	43417714	43417820	reg1030119.p1	3.992	+	AK172835 NM_213602 AY971516 AK290402 AK290400 AK095432	-12143	+	NM_001146037	-110850	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	-113610	+	AB046852 TSC_hg19_v1_chr18_-_43547294 NM_020964	129511	-	DQ893199 DQ893200 DQ893201 DQ893695 DQ896527 DQ896528 DQ896529 TSC_hg19_v1_chr18_-_43652247 BC035395 BC008216 NM_024430	234441	-	TSC_hg19_v1_chr18_-_43668143 AK129804	250410	-	AK172835|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_213602|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AY971516|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290402|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290400|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK095432|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AB046852|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##NM_020964|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##DQ893199|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893200|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893201|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893695|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896527|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896528|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896529|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##BC035395|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##NM_024430|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##AK129804|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	0.0	
chr18	67872893	67873066	reg1028264.p1	3.992	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-41	-	GU935335 GU935336 U56102 NM_006566	-248784	-	AK313199 TSC_hg19_v1_chr18_-_67615110	-257880	-	NM_004232 TSC_hg19_v1_chr18_+_67956194	83188	+	TSC_hg19_v1_chr18_+_67956280 BC020082	83282	+	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	2337796	-	BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##GU935335|CD226|10666|CD226 molecule##GU935336|CD226|10666|CD226 molecule##U56102|CD226|10666|CD226 molecule##NM_006566|CD226|10666|CD226 molecule##AK313199|CD226|10666|CD226 molecule##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC020082|SOCS6|9306|suppressor of cytokine signaling 6##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor	0.0	
chr2	211113544	211113650	reg1035801.p1	3.992	+	BC064549 BC039063 AK313498 AK296161 NM_001608	-23417	-	TSC_hg19_v1_chr2_-_211036099 BC126155 BC143914 BC032837 NM_152519 AK308432	-77547	-	AK124963 TSC_hg19_v1_chr2_-_211035462	-78177	-	X05451 M20643 AK311892 BC005318 NM_079422	54729	-	AB527940 CR456869 TSC_hg19_v1_chr2_-_211179896 NM_079420 AK311942	66242	-	TSC_hg19_v1_chr2_-_211341454 AK294674 BC028685 NM_001136574 Y11395 AK309295 AK312381 NM_006055 NM_001136575	227856	-	BC064549|ACADL|33|acyl-CoA dehydrogenase, long chain##BC039063|ACADL|33|acyl-CoA dehydrogenase, long chain##AK313498|ACADL|33|acyl-CoA dehydrogenase, long chain##AK296161|ACADL|33|acyl-CoA dehydrogenase, long chain##NM_001608|ACADL|33|acyl-CoA dehydrogenase, long chain##BC126155|C2orf67|151050|chromosome 2 open reading frame 67##BC143914|C2orf67|151050|chromosome 2 open reading frame 67##BC032837|C2orf67|151050|chromosome 2 open reading frame 67##NM_152519|C2orf67|151050|chromosome 2 open reading frame 67##AK308432|C2orf67|151050|chromosome 2 open reading frame 67##AK124963|C2orf67|151050|chromosome 2 open reading frame 67##X05451|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##M20643|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##AK311892|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##BC005318|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##NM_079422|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##CR456869|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##NM_079420|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##AK311942|MYL1|4632|myosin, light chain 1, alkali; skeletal, fast##AK294674|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##BC028685|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_001136574|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##Y11395|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##AK309295|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##AK312381|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_006055|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)##NM_001136575|LANCL1|10314|LanC lantibiotic synthetase component C-like 1 (bacterial)	0.949269	CTCF.p2:-33:0.949
chr1	219558996	219559168	reg1002442.p1	3.991	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-211840	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-211924	+	M19154 TSC_hg19_v1_chr1_+_218519634	-1039477	+	BC036078 TSC_hg19_v1_chr1_-_220101540	542447	-	AB464233 TSC_hg19_v1_chr1_-_220101784	542709	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	542883	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.0	
chr1	235243089	235243211	reg1027297.p2	3.991	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-347376	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-497904	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-499292	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	48939	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	49081	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	81413	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.023475	
chr3	32631080	32631166	reg1032179.p2	3.991	+	BX649189 TSC_hg19_v1_chr3_-_32612288 AK222573 AK222653 BC131620 AF078849 AK074348 AK293253 NM_016141	-18849	-	BC002797 TSC_hg19_v1_chr3_-_32544365 NM_017801	-86743	-	TSC_hg19_v1_chr3_-_32544335 AK000403	-86790	-	TSC_hg19_v1_chr3_+_32726700 AK023227 AK022952 NM_015442 AK309670 BC006382 BC002931 BC002928 AK297085 AK298693 CU678296 CU678298 DQ892895 DQ896143 EU831494 EU831581	95682	+	DQ232881 NM_001039111	228386	+	BC071751 NM_005508 AK292674	361977	+	BX649189|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222573|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK222653|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC131620|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AF078849|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK074348|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##AK293253|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##NM_016141|DYNC1LI1|51143|dynein, cytoplasmic 1, light intermediate chain 1##BC002797|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##NM_017801|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##AK000403|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##AK023227|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK022952|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##NM_015442|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK309670|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC006382|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002931|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##BC002928|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK297085|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##AK298693|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ892895|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ896143|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831494|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##EU831581|CNOT10|25904|CCR4-NOT transcription complex, subunit 10##DQ232881|TRIM71|131405|tripartite motif containing 71##NM_001039111|TRIM71|131405|tripartite motif containing 71##BC071751|CCR4|1233|chemokine (C-C motif) receptor 4##NM_005508|CCR4|1233|chemokine (C-C motif) receptor 4##AK292674|CCR4|1233|chemokine (C-C motif) receptor 4	0.0	
chr3	52879822	52879932	reg1030199.p1	3.991	+	NM_205853	-10643	-	AK298407 AK298412 AK298429 D38595 BC136392 BC136393 TSC_hg19_v1_chr3_-_52864689 AK303769 NM_001166449 NM_002218	-15176	-	NM_002217 TSC_hg19_v1_chr3_+_52828811 X67055 AK222757 AK298450 BC107604 BC107605 BC107814	-51078	+	TSC_hg19_v1_chr3_-_52931547 AY726591 BC047015	51572	-	TSC_hg19_v1_chr3_-_52931595 NM_001198974 NM_198563	51780	-	TSC_hg19_v1_chr3_-_53079286 NM_001005159	199432	-	NM_205853|MUSTN1|389125|musculoskeletal, embryonic nuclear protein 1##AK298407|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##AK298412|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##AK298429|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##D38595|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##BC136392|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##BC136393|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##AK303769|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##NM_001166449|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##NM_002218|ITIH4|3700|inter-alpha-trypsin inhibitor heavy chain family, member 4##NM_002217|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##X67055|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##AK222757|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##AK298450|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##BC107604|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##BC107605|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##BC107814|ITIH3|3699|inter-alpha-trypsin inhibitor heavy chain 3##AY726591|TMEM110|375346|transmembrane protein 110##BC047015|TMEM110|375346|transmembrane protein 110##NM_001198974|TMEM110-MUSTN1|100526772|TMEM110-MUSTN1 readthrough##NM_198563|TMEM110|375346|transmembrane protein 110##NM_001005159|SFMBT1|51460|Scm-like with four mbt domains 1	0.086518	
chr4	111431981	111432078	reg1004608.p1	3.991	+	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	-34656	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	-312244	-	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-597982	+	AK313987 TSC_hg19_v1_chr4_-_111543909	111881	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	112246	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	126140	-	AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK313987|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2	0.0	
chr4	185395513	185395608	reg1032561.p1	3.991	+	BC035035 AY358676 AK057370 NM_153343	-256495	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-567649	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-567740	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	121	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	175041	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	175273	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr5	71761570	71761722	reg1032628.p1	3.991	+	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-145424	+	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	-145444	+	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	-145566	-	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	41537	-	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	350844	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	382295	+	BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1	0.0	
chr11	118663721	118663813	reg1029168.p4	3.990	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-1833	-	TSC_hg19_v1_chr11_-_118661865 Z11685	-1888	-	TSC_hg19_v1_chr11_-_118661860 BC026228	-1908	-	AK291512 NM_001716 BC110352 X68149 AB464488	90793	+	NM_032966 X68829	100333	+	AB094091 NM_182557	117845	-	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like	0.0	
chr11	63719507	63719631	reg1037518.p1	3.990	+	TSC_hg19_v1_chr11_+_63706473 NM_024771 AK023910 AK300451 AK303557 JF263566 BC041617 BC052298	-13085	+	TSC_hg19_v1_chr11_-_63684632 AB593132	-34930	-	BC023587 NM_173587	-35254	-	TSC_hg19_v1_chr11_+_63742069 BC063025 NM_004074 BC000501 AK311934 BT009803 CR407687	22514	+	AK098029 NM_017670	33755	+	TSC_hg19_v1_chr11_+_63753896 AK000120	34292	+	NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##JF263566|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AB593132|RCOR2|283248|REST corepressor 2##BC023587|RCOR2|283248|REST corepressor 2##NM_173587|RCOR2|283248|REST corepressor 2##BC063025|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##NM_004074|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##BC000501|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##AK311934|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##BT009803|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##CR407687|COX8A|1351|cytochrome c oxidase subunit VIIIA (ubiquitous)##AK098029|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##NM_017670|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1##AK000120|OTUB1|55611|OTU domain, ubiquitin aldehyde binding 1	0.0	
chr12	109058356	109058536	reg1002005.p1	3.990	+	TSC_hg19_v1_chr12_-_109027671 AK127638 AK298738 AK098315 NM_003006	-30784	-	TSC_hg19_v1_chr12_-_109027639 AK300057 AK290395 BC029782	-30813	-	AK225644 U02297 AK295238 TSC_hg19_v1_chr12_-_109027584	-30872	-	TSC_hg19_v1_chr12_-_109125268 AL162070 AK297463	66817	-	TSC_hg19_v1_chr12_-_109125284 BC002342 AB209909	66834	-	TSC_hg19_v1_chr12_-_109125295 AK023205 AK223073 AK304839 AK311315 AK316065 AB030656 NM_014325	66846	-	AK127638|SELPLG|6404|selectin P ligand##AK098315|SELPLG|6404|selectin P ligand##NM_003006|SELPLG|6404|selectin P ligand##AK290395|SELPLG|6404|selectin P ligand##BC029782|SELPLG|6404|selectin P ligand##AK225644|SELPLG|6404|selectin P ligand##U02297|SELPLG|6404|selectin P ligand##AK295238|SELPLG|6404|selectin P ligand##AL162070|CORO1C|23603|coronin, actin binding protein, 1C##AK297463|CORO1C|23603|coronin, actin binding protein, 1C##BC002342|CORO1C|23603|coronin, actin binding protein, 1C##AB209909|CORO1C|23603|coronin, actin binding protein, 1C##AK023205|CORO1C|23603|coronin, actin binding protein, 1C##AK223073|CORO1C|23603|coronin, actin binding protein, 1C##AK304839|CORO1C|23603|coronin, actin binding protein, 1C##AK311315|CORO1C|23603|coronin, actin binding protein, 1C##AK316065|CORO1C|23603|coronin, actin binding protein, 1C##AB030656|CORO1C|23603|coronin, actin binding protein, 1C##NM_014325|CORO1C|23603|coronin, actin binding protein, 1C	0.0	
chr14	64320689	64320844	reg1032930.p1	3.990	+	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	-1071	+	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	-126017	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	-212204	-	NM_182913 AY061758 AK297874	360111	+	NM_182910	361905	+	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	428897	-	NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)	0.0	
chr15	90722033	90722126	reg1026118.p2	3.990	+	TSC_hg19_v1_chr15_-_90645713 AK312627	-76352	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	-76374	-	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	-76417	-	TSC_hg19_v1_chr15_+_90728151 NM_020210 AK289991 AY358392	6117	+	TSC_hg19_v1_chr15_+_90744561 AY445887 NM_198925 AB051532 BC126438 BC144141 BC110853 AB385501 HQ258520 AK026108	22611	+	TSC_hg19_v1_chr15_-_90777138 AB451276 AB451406 AB463454 CR456955 DQ891196 DQ894379	55049	-	AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_020210|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK289991|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY358392|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY445887|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_198925|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB051532|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC126438|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC144141|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC110853|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##HQ258520|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK026108|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB451276|CIB1|10519|calcium and integrin binding 1 (calmyrin)##AB451406|CIB1|10519|calcium and integrin binding 1 (calmyrin)##CR456955|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ891196|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ894379|CIB1|10519|calcium and integrin binding 1 (calmyrin)	0.0	
chr17	29151638	29151741	reg1034754.p1	3.990	+	TSC_hg19_v1_chr17_-_29151711 DQ298450 DQ892276 CU692798 AK296238 AF046059 BC023567	-14	-	TSC_hg19_v1_chr17_+_29058664 BC047718	-93001	+	BC096718 BC098126 BC098273 NM_015594	-265106	+	TSC_hg19_v1_chr17_-_29151725 AK313315 NM_015986	74	-	TSC_hg19_v1_chr17_+_29158987 AL832103 BC015051 AJ314648 AY557611 NM_024857	7296	+	CU692922 TSC_hg19_v1_chr17_-_29233257 AJ314645 AK026382 AK225474 BC024328 AK298495 NM_024683	81562	-	DQ298450|CRLF3|51379|cytokine receptor-like factor 3##DQ892276|CRLF3|51379|cytokine receptor-like factor 3##AK296238|CRLF3|51379|cytokine receptor-like factor 3##AF046059|CRLF3|51379|cytokine receptor-like factor 3##BC023567|CRLF3|51379|cytokine receptor-like factor 3##BC047718|SUZ12P|440423|suppressor of zeste 12 homolog pseudogene##BC096718|TBC1D29|26083|TBC1 domain family, member 29##BC098126|TBC1D29|26083|TBC1 domain family, member 29##BC098273|TBC1D29|26083|TBC1 domain family, member 29##NM_015594|TBC1D29|26083|TBC1 domain family, member 29##AK313315|CRLF3|51379|cytokine receptor-like factor 3##NM_015986|CRLF3|51379|cytokine receptor-like factor 3##AL832103|ATAD5|79915|ATPase family, AAA domain containing 5##BC015051|ATAD5|79915|ATPase family, AAA domain containing 5##AJ314648|ATAD5|79915|ATPase family, AAA domain containing 5##AY557611|ATAD5|79915|ATPase family, AAA domain containing 5##NM_024857|ATAD5|79915|ATPase family, AAA domain containing 5##AJ314645|C17orf42|79736|chromosome 17 open reading frame 42##AK026382|C17orf42|79736|chromosome 17 open reading frame 42##AK225474|C17orf42|79736|chromosome 17 open reading frame 42##BC024328|C17orf42|79736|chromosome 17 open reading frame 42##AK298495|C17orf42|79736|chromosome 17 open reading frame 42##NM_024683|C17orf42|79736|chromosome 17 open reading frame 42	0.105874	
chr19	16477288	16477431	reg1035247.p1	3.990	+	AF134053 TSC_hg19_v1_chr19_+_16435803	-41590	+	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	-41718	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	-168609	+	BC142662 AB527825 AF110265 BC131590 BC037558 TSC_hg19_v1_chr19_-_16582771 AB015346 NM_021235 BC067114 BC051873 BC142716 AK296473 AK297428 AK024166	105417	-	TSC_hg19_v1_chr19_-_16582810 AK291359	105493	-	CU677059 AB576176 DQ890903 DQ894056 AK058084 BC014595 NM_145046	129611	-	AF134053|KLF2|10365|Kruppel-like factor 2 (lung)##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)##AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC142662|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AF110265|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC131590|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC037558|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB015346|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##NM_021235|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC067114|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC051873|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC142716|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK296473|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK297428|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK024166|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK291359|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB576176|CALR3|125972|calreticulin 3##DQ890903|CALR3|125972|calreticulin 3##DQ894056|CALR3|125972|calreticulin 3##AK058084|CALR3|125972|calreticulin 3##BC014595|CALR3|125972|calreticulin 3##NM_145046|CALR3|125972|calreticulin 3	0.0	
chr20	47940257	47940364	reg1010626.p1	3.990	+	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-45115	+	TSC_hg19_v1_chr20_+_47895176 BC042807 CR936805	-45138	+	TSC_hg19_v1_chr20_-_47894629 BC030789 NM_021035	-45637	-	BC110572 BC110573 NM_004975	158869	-	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	244379	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	389920	-	BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC042807|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##CR936805|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC030789|ZNFX1|57169|zinc finger, NFX1-type containing 1##NM_021035|ZNFX1|57169|zinc finger, NFX1-type containing 1##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.043881	
chr21	45573850	45573981	reg1031746.p2	3.990	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-20354	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-20410	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-46616	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	86851	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	86942	-	AF194032 NM_013369 NM_175867	108183	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr6_mcf_hap5	4689987	4690073	reg1029986.p1	3.990	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.960769	CTCF.p2:8:0.961
chr7	18879025	18879132	reg1033726.p1	3.990	+	TSC_hg19_v1_chr7_+_18548965 AK304343	-330109	+	NM_001204147 NM_001204148 TSC_hg19_v1_chr7_+_18548932 AK304410	-330155	+	CR749550 EU832154 EU832248 TSC_hg19_v1_chr7_+_18535882 NM_058176 NM_178425 AB385379 AY032737 AY032738 AY197371 EU832247 BC111735	-343207	+	TSC_hg19_v1_chr7_-_19157262 BC036704 NM_000474	278200	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	305935	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	869568	-	AK304343|HDAC9|9734|histone deacetylase 9##NM_001204147|HDAC9|9734|histone deacetylase 9##NM_001204148|HDAC9|9734|histone deacetylase 9##AK304410|HDAC9|9734|histone deacetylase 9##CR749550|HDAC9|9734|histone deacetylase 9##EU832154|HDAC9|9734|histone deacetylase 9##EU832248|HDAC9|9734|histone deacetylase 9##NM_058176|HDAC9|9734|histone deacetylase 9##NM_178425|HDAC9|9734|histone deacetylase 9##AY032737|HDAC9|9734|histone deacetylase 9##AY032738|HDAC9|9734|histone deacetylase 9##AY197371|HDAC9|9734|histone deacetylase 9##EU832247|HDAC9|9734|histone deacetylase 9##BC111735|HDAC9|9734|histone deacetylase 9##BC036704|TWIST1|7291|twist homolog 1 (Drosophila)##NM_000474|TWIST1|7291|twist homolog 1 (Drosophila)##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor	0.0	
chr9	132646776	132646933	reg1017615.p1	3.990	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-49089	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-49132	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-49170	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	158500	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	158634	-	BC039728 NM_001136557 NM_001136558 NM_020960	169130	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.03144	
chr1	228327756	228327823	reg1035848.p1	3.989	+	TSC_hg19_v1_chr1_-_228297001 BC052806 BX647745 AK056987 NM_181441 NM_181454 NM_181455 NM_181456 NM_181462 NM_181463 NM_181464 NM_181465	-30800	-	TSC_hg19_v1_chr1_-_228291059 AK123377	-36686	-	EU832643 EU832720 TSC_hg19_v1_chr1_-_228291006 BC062585 BC002843 NM_024319 AY137773	-36807	-	NM_001242839 TSC_hg19_v1_chr1_+_228327928 NM_000858 NM_001159390 NM_001242840	83	+	TSC_hg19_v1_chr1_+_228327979 AK303845	184	+	TSC_hg19_v1_chr1_+_228327982 BC006249	202	+	BC052806|MRPL55|128308|mitochondrial ribosomal protein L55##BX647745|MRPL55|128308|mitochondrial ribosomal protein L55##AK056987|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181441|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181454|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181455|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181456|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181462|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181463|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181464|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181465|MRPL55|128308|mitochondrial ribosomal protein L55##AK123377|C1orf35|79169|chromosome 1 open reading frame 35##EU832643|C1orf35|79169|chromosome 1 open reading frame 35##EU832720|C1orf35|79169|chromosome 1 open reading frame 35##BC062585|C1orf35|79169|chromosome 1 open reading frame 35##BC002843|C1orf35|79169|chromosome 1 open reading frame 35##NM_024319|C1orf35|79169|chromosome 1 open reading frame 35##AY137773|C1orf35|79169|chromosome 1 open reading frame 35##NM_001242839|GUK1|2987|guanylate kinase 1##NM_000858|GUK1|2987|guanylate kinase 1##NM_001159390|GUK1|2987|guanylate kinase 1##NM_001242840|GUK1|2987|guanylate kinase 1##AK303845|GUK1|2987|guanylate kinase 1##BC006249|GUK1|2987|guanylate kinase 1	0.0	
chr1	247123491	247123671	reg1034328.p2	3.989	+	AK057394 AY157619 AB059277 NM_015446	-28889	-	TSC_hg19_v1_chr1_-_247054277 AL833491	-69286	-	TSC_hg19_v1_chr1_+_246887713 AK075178 BC026185 CU693152 AF151807	-235924	+	BC023527 AF242519 TSC_hg19_v1_chr1_-_247171319	47731	-	TSC_hg19_v1_chr1_-_247171329 BC041082 AX721130	47750	-	BC055096 TSC_hg19_v1_chr1_-_247171375 NM_001204221 NM_020394	47793	-	AK057394|AHCTF1P1|285116|AT hook containing transcription factor 1 pseudogene 1##AY157619|AHCTF1|25909|AT hook containing transcription factor 1##AB059277|AHCTF1|25909|AT hook containing transcription factor 1##NM_015446|AHCTF1|25909|AT hook containing transcription factor 1##AL833491|AHCTF1|25909|AT hook containing transcription factor 1##AK075178|SCCPDH|51097|saccharopine dehydrogenase (putative)##BC026185|SCCPDH|51097|saccharopine dehydrogenase (putative)##AF151807|SCCPDH|51097|saccharopine dehydrogenase (putative)##BC023527|ZNF695|57116|zinc finger protein 695##BC041082|ZNF695|57116|zinc finger protein 695##BC055096|ZNF695|57116|zinc finger protein 695##NM_001204221|ZNF695|57116|zinc finger protein 695##NM_020394|ZNF695|57116|zinc finger protein 695	0.0	
chr14	64011500	64011614	reg1033567.p1	3.989	+	TSC_hg19_v1_chr14_-_64010089 BC056156 BC034994	-1468	-	TSC_hg19_v1_chr14_-_64010080 AK313500 BC013154 NM_006246	-1483	-	TSC_hg19_v1_chr14_-_64010017 Z69029 AK299520 BC073873 AB209811 BC092477 L76703 BC064358	-1541	-	BX248008 NM_001008726	96567	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	97005	-	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	183192	-	BC056156|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC034994|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AK313500|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC013154|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##NM_006246|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##Z69029|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AK299520|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC073873|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AB209811|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC092477|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##L76703|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC064358|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BX248008|WDR89|112840|WD repeat domain 89##NM_001008726|WDR89|112840|WD repeat domain 89##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1	0.0	
chr15	96601925	96602057	reg1023971.p2	3.989	+	TSC_hg19_v1_chr15_-_95870310 BC040875	-731672	-	NM_001159644 BC025708 BC111024 AK002037	-1702682	+	NM_001159643 NM_018349 AY656717 BC131527	-1760530	+	BC106083 NM_001145155 FM208183	267170	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	271986	+	AK316086 NM_001145156	273802	+	BC040875|LOC400456|400456|uncharacterized LOC400456##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.0	
chr17	48248462	48248577	reg1032876.p1	3.989	+	AK300710 TSC_hg19_v1_chr17_+_48243372 L34355 L35853 L46810 NM_000023 NM_001135697 AK293614 AK290622 BC025702 U08895 AB464188 DQ893777 CU693018	-5137	+	AJ401189 NM_032595 TSC_hg19_v1_chr17_-_48227977	-20593	-	TSC_hg19_v1_chr17_-_48207145 BC142728 BC136485 AY148482 NM_174920 AK291482 AK094209 AK225767 BC141822	-41370	-	TSC_hg19_v1_chr17_+_48262817 CU691369	14320	+	J00113 TSC_hg19_v1_chr17_-_48262921 M32790 M32798	14400	-	TSC_hg19_v1_chr17_-_48264068 X06269 S64596	15642	-	AK300710|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L34355|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L35853|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##L46810|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##NM_000023|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##NM_001135697|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##AK290622|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##BC025702|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##U08895|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##DQ893777|SGCA|6442|sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)##AJ401189|PPP1R9B|84687|protein phosphatase 1, regulatory subunit 9B##NM_032595|PPP1R9B|84687|protein phosphatase 1, regulatory subunit 9B##BC142728|SAMD14|201191|sterile alpha motif domain containing 14##BC136485|SAMD14|201191|sterile alpha motif domain containing 14##AY148482|SAMD14|201191|sterile alpha motif domain containing 14##NM_174920|SAMD14|201191|sterile alpha motif domain containing 14##AK291482|SAMD14|201191|sterile alpha motif domain containing 14##AK094209|SAMD14|201191|sterile alpha motif domain containing 14##AK225767|SAMD14|201191|sterile alpha motif domain containing 14##BC141822|SAMD14|201191|sterile alpha motif domain containing 14##J00113|COL1A1|1277|collagen, type I, alpha 1##M32798|COL1A1|1277|collagen, type I, alpha 1##X06269|COL1A1|1277|collagen, type I, alpha 1##S64596|COL1A1|1277|collagen, type I, alpha 1	0.0	
chr17	68133621	68133759	reg1031786.p1	3.989	+	BC033038 NM_170742	-32696	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-62260	+	TSC_hg19_v1_chr17_+_67498396 U39064	-635210	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	32006	+	TSC_hg19_v1_chr17_-_70116937 AL833139	1983248	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	1983469	+	BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##U39064|MAP2K6|5608|mitogen-activated protein kinase kinase 6##AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9	0.0	
chr19	57813532	57813658	reg1033026.p2	3.989	+	TSC_hg19_v1_chr19_+_57791852 AK292144 NM_006635 AK074582 AY329492	-21708	+	TSC_hg19_v1_chr19_+_57791351 AK298106	-22239	+	TSC_hg19_v1_chr19_+_57752051 NM_001023563 NM_001145078	-61538	+	TSC_hg19_v1_chr19_+_57831849 NM_213598 AK131547	18319	+	TSC_hg19_v1_chr19_+_57862669 NM_020657 AJ276316 BC111531 BC111532	49068	+	AF058918 AF291676 AK055662 NM_173631 BC008889 BC032809 BC042681 AL832545 BC064426 AK291464	61321	+	AK292144|ZNF460|10794|zinc finger protein 460##NM_006635|ZNF460|10794|zinc finger protein 460##AK074582|ZNF460|10794|zinc finger protein 460##AY329492|ZNF460|10794|zinc finger protein 460##AK298106|ZNF460|10794|zinc finger protein 460##NM_001023563|ZNF805|390980|zinc finger protein 805##NM_001145078|ZNF805|390980|zinc finger protein 805##NM_213598|ZNF543|125919|zinc finger protein 543##AK131547|ZNF543|125919|zinc finger protein 543##NM_020657|ZNF304|57343|zinc finger protein 304##AJ276316|ZNF304|57343|zinc finger protein 304##BC111531|ZNF304|57343|zinc finger protein 304##BC111532|ZNF304|57343|zinc finger protein 304##AF058918|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##AF291676|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##AK055662|ZNF547|284306|zinc finger protein 547##NM_173631|ZNF547|284306|zinc finger protein 547##BC008889|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##BC032809|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##BC042681|ZNF547|284306|zinc finger protein 547##AL832545|ZNF547|284306|zinc finger protein 547##AK291464|ZNF547|284306|zinc finger protein 547	0.150483	
chr10	17686063	17686244	reg1029522.p2	3.988	+	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	-26780	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	-189788	-	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	-189939	-	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	77	+	NM_001098844 BC157856	108101	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	165250	+	BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1	0.0	
chr11	57227876	57227964	reg1033180.p1	3.988	+	NM_017611	-32868	-	TSC_hg19_v1_chr11_-_57194592 AK075552 AK298028 AK315839 NM_199329	-33328	-	TSC_hg19_v1_chr11_-_57194589 AK311401	-33333	-	TSC_hg19_v1_chr11_+_57228149 BC113673 BC117276 BC143818 AF532858 AX751514 AY250221 DQ864979 NM_178570	312	+	AF045584 TSC_hg19_v1_chr11_-_57282334 BC001639 NM_001198810	54416	-	TSC_hg19_v1_chr11_-_57283184 AB103033 NM_003627	55252	-	NM_017611|SLC43A3|29015|solute carrier family 43, member 3##AK075552|SLC43A3|29015|solute carrier family 43, member 3##AK298028|SLC43A3|29015|solute carrier family 43, member 3##AK315839|SLC43A3|29015|solute carrier family 43, member 3##NM_199329|SLC43A3|29015|solute carrier family 43, member 3##AK311401|SLC43A3|29015|solute carrier family 43, member 3##BC113673|RTN4RL2|349667|reticulon 4 receptor-like 2##BC117276|RTN4RL2|349667|reticulon 4 receptor-like 2##BC143818|RTN4RL2|349667|reticulon 4 receptor-like 2##AF532858|RTN4RL2|349667|reticulon 4 receptor-like 2##AX751514|RTN4RL2|349667|reticulon 4 receptor-like 2##AY250221|RTN4RL2|349667|reticulon 4 receptor-like 2##DQ864979|RTN4RL2|349667|reticulon 4 receptor-like 2##NM_178570|RTN4RL2|349667|reticulon 4 receptor-like 2##AF045584|SLC43A1|8501|solute carrier family 43, member 1##BC001639|SLC43A1|8501|solute carrier family 43, member 1##NM_001198810|SLC43A1|8501|solute carrier family 43, member 1##AB103033|SLC43A1|8501|solute carrier family 43, member 1##NM_003627|SLC43A1|8501|solute carrier family 43, member 1	0.891076	CTCF.p2:-23:0.891
chr14	61906212	61906392	reg1032622.p2	3.988	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-117775	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-157780	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-158108	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	255888	+	FJ790247 NM_001243084	258037	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	322817	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.0	
chr16	27760320	27760423	reg1034842.p1	3.988	+	TSC_hg19_v1_chr16_+_27561464 NM_015202 AB011128 BC150276 BC131508	-198907	+	TSC_hg19_v1_chr16_-_27561248 NM_001520 U02619	-199102	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	-199140	-	BC016460 NM_144675	139106	-	TSC_hg19_v1_chr16_-_28074776 AY358206 NM_001109763	314431	-	AY026388 BC130304 BC144189 TSC_hg19_v1_chr16_-_28222816 AK123846	462414	-	NM_015202|KIAA0556|23247|KIAA0556##AB011128|KIAA0556|23247|KIAA0556##BC150276|KIAA0556|23247|KIAA0556##BC131508|KIAA0556|23247|KIAA0556##NM_001520|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##U02619|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC016460|GSG1L|146395|GSG1-like##NM_144675|GSG1L|146395|GSG1-like##AY358206|GSG1L|146395|GSG1-like##NM_001109763|GSG1L|146395|GSG1-like##AY026388|XPO6|23214|exportin 6##BC130304|XPO6|23214|exportin 6##BC144189|XPO6|23214|exportin 6##AK123846|XPO6|23214|exportin 6	0.034218	
chr16	71576328	71576467	reg1033435.p1	3.988	+	NM_005769 AF131235 NM_001166395 AK026635 AK074746	-16304	+	AK292260 BC030658 AK057330 BC047091 NM_006961	-53182	-	AK123826 TSC_hg19_v1_chr16_+_71496196	-80209	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	34575	-	BC005052 NM_001017967 NM_052858 AK307585 BC011893 BC013376 AK056842 AK292185 CU680584	83700	+	AB463166 AM393067 AM393542 BC129927 BC129983 NM_015020	172303	-	NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19##X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase##BC005052|MARVELD3|91862|MARVEL domain containing 3##NM_001017967|MARVELD3|91862|MARVEL domain containing 3##NM_052858|MARVELD3|91862|MARVEL domain containing 3##AK307585|MARVELD3|91862|MARVEL domain containing 3##BC011893|MARVELD3|91862|MARVEL domain containing 3##BC013376|MARVELD3|91862|MARVEL domain containing 3##AK056842|MARVELD3|91862|MARVEL domain containing 3##AK292185|MARVELD3|91862|MARVEL domain containing 3##AM393067|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AM393542|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129927|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##BC129983|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##NM_015020|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2	1.021377	CTCF.p2:-21:0.976
chr17	1388280	1388388	reg1027675.p1	3.988	+	BT007277 DQ891147 DQ894327 AB528363 TSC_hg19_v1_chr17_-_1359527 D10656 BC001718 BC009837 AK291060 BC008506 NM_005206 NM_016823	-28842	-	TSC_hg19_v1_chr17_-_1303556 NM_006761	-84781	-	TSC_hg19_v1_chr17_-_1303504 BT007161 CU674076 EU176525 U28936 AB590347 BC000179 AX775995 U43399 U43430 U54778 U20972 BC001440 AY883089 AK295260 AK295997 AK296050 AK296555 AK128785 AK316185 AK316201	-84865	-	TSC_hg19_v1_chr17_-_1389055 NM_001080950	704	-	TSC_hg19_v1_chr17_-_1389335 AK304782	1062	-	TSC_hg19_v1_chr17_-_1394974 NM_033375	6611	-	BT007277|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##DQ891147|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##DQ894327|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##D10656|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC001718|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC009837|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##AK291060|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC008506|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_005206|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_016823|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_006761|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BT007161|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##EU176525|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U28936|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC000179|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43399|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43430|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U54778|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U20972|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC001440|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AY883089|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295260|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295997|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296050|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296555|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK128785|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316185|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316201|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##NM_001080950|MYO1C|4641|myosin IC##AK304782|MYO1C|4641|myosin IC##NM_033375|MYO1C|4641|myosin IC	0.010115	
chr2	201983144	201983275	reg1018538.p1	3.988	+	AF009616 TSC_hg19_v1_chr2_+_201981056 AF010127 U97074 AK315924 BC001602 AB209600	-2168	+	TSC_hg19_v1_chr2_+_201980874 AK296036 NM_001127184 NM_001202516 NM_001202517 NM_001202519 NM_003879 AK297387 AF005774	-2314	+	TSC_hg19_v1_chr2_-_201967706 D28373	-15505	-	AF015450 NM_001127183 AK308767 TSC_hg19_v1_chr2_+_201983395	122	+	TSC_hg19_v1_chr2_+_201983419 AK289913 AK315208	263	+	NM_001202518 AK304585 AF041462	14513	+	AF009616|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF010127|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##U97074|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK315924|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##BC001602|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AB209600|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK296036|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001127184|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202516|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202517|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202519|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_003879|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK297387|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF005774|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF015450|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001127183|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK308767|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK289913|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK315208|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202518|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK304585|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF041462|CFLAR|8837|CASP8 and FADD-like apoptosis regulator	0.0	
chr5	73935157	73935315	reg1039110.p2	3.988	+	AK304761 NM_001244364 TSC_hg19_v1_chr5_+_73109359	-825886	+	TSC_hg19_v1_chr5_+_72921990 AK094713 NM_001080479 NM_001177693	-1013251	+	AK300525 TSC_hg19_v1_chr5_+_72861597 AL831972 AK074217 AK302021 NM_032175	-1073654	+	TSC_hg19_v1_chr5_-_73936554 AF005381 AF059611 BC000418 AF010314 AK295128 AK312608 AK299624	1227	-	AK096578 NM_003633	2012	-	AK130002 NM_000521 TSC_hg19_v1_chr5_+_73981034 AK122992 AF378118 M13519	45772	+	AK304761|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001244364|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK094713|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001080479|RGNEF|64283|190 kDa guanine nucleotide exchange factor##NM_001177693|RGNEF|64283|190 kDa guanine nucleotide exchange factor##AK300525|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AL831972|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK074217|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AK302021|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##NM_032175|UTP15|84135|UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae)##AF005381|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF059611|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##BC000418|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AF010314|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK295128|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK312608|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK096578|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##NM_003633|ENC1|8507|ectodermal-neural cortex 1 (with BTB-like domain)##AK130002|HEXB|3074|hexosaminidase B (beta polypeptide)##NM_000521|HEXB|3074|hexosaminidase B (beta polypeptide)##AK122992|HEXB|3074|hexosaminidase B (beta polypeptide)##AF378118|HEXB|3074|hexosaminidase B (beta polypeptide)##M13519|HEXB|3074|hexosaminidase B (beta polypeptide)	0.0	
chr6	149556469	149556547	reg1033160.p1	3.988	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-488299	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-892317	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-892518	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	82595	+	AK315038 NM_015093 AK307650	82933	+	AY340238 NM_001002255 BC130305 HQ258040	165000	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr6	24495038	24495185	reg1022400.p1	3.988	+	TSC_hg19_v1_chr6_+_24495080 AK290800 AK294699 AK315380	-33	+	L11702 CU676688 AY007546 BC093645 BC112001 L11701 AK310692 BC020748 NM_177483 AJ308108 NM_001503	-5318	-	TSC_hg19_v1_chr6_+_24403163 NM_020662 AK297418 AK299825 AF288288 BC069009 AK054587 AK291058 AK298849 BC001028 BC018833 AF293076 CU686695	-91903	+	TSC_hg19_v1_chr6_+_24495196 AK314357 BC034321 NM_001080 NM_170740 DQ891671 DQ894857 AJ427355 Y11192	84	+	AK310289 NM_001252328	88343	-	AK296310 AK295008 AK307503 AK296426 BC140821 BC144628 NM_001168375 NM_001168376 TSC_hg19_v1_chr6_-_24646374 AB002317 BC152460 NM_001168374 NM_001168377 NM_014809	151057	-	AK290800|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK294699|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK315380|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##L11702|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AY007546|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC093645|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC112001|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##L11701|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310692|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC020748|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_177483|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AJ308108|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_001503|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_020662|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK297418|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK299825|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AF288288|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC069009|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK054587|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK291058|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK298849|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC001028|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##BC018833|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AF293076|MRS2|57380|MRS2 magnesium homeostasis factor homolog (S. cerevisiae)##AK314357|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##BC034321|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_001080|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_170740|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ891671|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ894857|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AJ427355|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##Y11192|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK310289|KIAA0319|9856|KIAA0319##NM_001252328|KIAA0319|9856|KIAA0319##AK296310|KIAA0319|9856|KIAA0319##AK295008|KIAA0319|9856|KIAA0319##AK307503|KIAA0319|9856|KIAA0319##AK296426|KIAA0319|9856|KIAA0319##BC140821|KIAA0319|9856|KIAA0319##BC144628|KIAA0319|9856|KIAA0319##NM_001168375|KIAA0319|9856|KIAA0319##NM_001168376|KIAA0319|9856|KIAA0319##AB002317|KIAA0319|9856|KIAA0319##BC152460|KIAA0319|9856|KIAA0319##NM_001168374|KIAA0319|9856|KIAA0319##NM_001168377|KIAA0319|9856|KIAA0319##NM_014809|KIAA0319|9856|KIAA0319	0.0	
chr7	104624537	104624701	reg1033388.p2	3.988	+	TSC_hg19_v1_chr7_-_104567089 BC050337	-57529	-	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-655401	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-776188	-	TSC_hg19_v1_chr7_-_104653491 AK124046	28863	-	TSC_hg19_v1_chr7_-_104654062 AK094372	29455	-	TSC_hg19_v1_chr7_-_104654534 BC017007 AK123476	29883	-	BC050337|LOC723809|723809|uncharacterized LOC723809##AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545##BC017007|LOC100216545|100216545|uncharacterized LOC100216545##AK123476|LOC100216545|100216545|uncharacterized LOC100216545	0.0	
chr7	43761112	43761225	reg1010175.p2	3.988	+	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	-138474	+	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	-608942	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-789199	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	7926	-	TSC_hg19_v1_chr7_+_43798278 NM_000712 NM_001253823 BC005902 BC008456	37099	+	TSC_hg19_v1_chr7_+_43798283 AK291862 X93086 U34877	37148	+	NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44##NM_000712|BLVRA|644|biliverdin reductase A##NM_001253823|BLVRA|644|biliverdin reductase A##BC005902|BLVRA|644|biliverdin reductase A##BC008456|BLVRA|644|biliverdin reductase A##AK291862|BLVRA|644|biliverdin reductase A##X93086|BLVRA|644|biliverdin reductase A##U34877|BLVRA|644|biliverdin reductase A	0.0	
chr9	5882224	5882290	reg1035415.p2	3.988	+	TSC_hg19_v1_chr9_-_5833082 NM_024896	-49179	-	TSC_hg19_v1_chr9_-_5833067 AK127218	-49190	-	AL834191 AB058718 TSC_hg19_v1_chr9_-_5833045 BC136771 BC136773 BC144404	-49306	-	U06654 BC014423 AK312149 NM_005511 U06452	8597	+	BC108654 TSC_hg19_v1_chr9_-_5968443	86151	-	TSC_hg19_v1_chr9_-_6007953 NM_001017969	125707	-	NM_024896|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AK127218|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AL834191|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AB058718|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136771|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136773|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC144404|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##U06654|MLANA|2315|melan-A##BC014423|MLANA|2315|melan-A##AK312149|MLANA|2315|melan-A##NM_005511|MLANA|2315|melan-A##U06452|MLANA|2315|melan-A##NM_001017969|KIAA2026|158358|KIAA2026	0.0	
chrY	13478284	13478424	reg1033866.p2	3.988	+	BC121113 BC121114 NM_001077697 U58096 BC075016 AY130858 M98525	-4112818	+	BC121113 NM_001197242 NM_003308 U58096 AK093413 AX748111 AY130858 M98525	-4173743	+	BC121113 BC121114 NM_001077697 U58096 BC075016 AK093413 AX748111 AY130858 NM_001164471 M94893 M98525	-4242277	+	TSC_hg19_v1_chrY_+_14774204 AL080135	1295895	+	AF000986 NM_004654	1334805	+	BC034942 NM_001122665	1537664	+	BC121113|TSPY1|7258|testis specific protein, Y-linked 1##BC121114|TSPY3|728137|testis specific protein, Y-linked 3##NM_001077697|TSPY3|728137|testis specific protein, Y-linked 3##U58096|TSPY1|7258|testis specific protein, Y-linked 1##BC075016|TSPY3|728137|testis specific protein, Y-linked 3##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##M98525|TSPY1|7258|testis specific protein, Y-linked 1##BC121113|TSPY1|7258|testis specific protein, Y-linked 1##NM_001197242|TSPY1|7258|testis specific protein, Y-linked 1##NM_003308|TSPY1|7258|testis specific protein, Y-linked 1##U58096|TSPY1|7258|testis specific protein, Y-linked 1##AK093413|TSPY4|728395|testis specific protein, Y-linked 4##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##M98525|TSPY1|7258|testis specific protein, Y-linked 1##BC121113|TSPY1|7258|testis specific protein, Y-linked 1##BC121114|TSPY3|728137|testis specific protein, Y-linked 3##NM_001077697|TSPY3|728137|testis specific protein, Y-linked 3##U58096|TSPY1|7258|testis specific protein, Y-linked 1##BC075016|TSPY3|728137|testis specific protein, Y-linked 3##AK093413|TSPY4|728395|testis specific protein, Y-linked 4##AY130858|TSPY1|7258|testis specific protein, Y-linked 1##NM_001164471|TSPY4|728395|testis specific protein, Y-linked 4##M94893|TSPY1|7258|testis specific protein, Y-linked 1##M98525|TSPY1|7258|testis specific protein, Y-linked 1##AL080135|TTTY15|64595|testis-specific transcript, Y-linked 15 (non-protein coding)##AF000986|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked##NM_004654|USP9Y|8287|ubiquitin specific peptidase 9, Y-linked##BC034942|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked##NM_001122665|DDX3Y|8653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	0.0	
chr13	103136793	103136932	reg1043768.p1	3.987	+	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	-82787	-	NM_004115 U66200	-567868	-	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	-1031867	+	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	112474	+	HQ258371 NM_001010977 BC132748 BC132750	209996	-	NM_001146197	274559	-	BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_004115|FGF14|2259|fibroblast growth factor 14##U66200|FGF14|2259|fibroblast growth factor 14##AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II##HQ258371|METTL21C|196541|methyltransferase like 21C##NM_001010977|METTL21C|196541|methyltransferase like 21C##BC132748|METTL21C|196541|methyltransferase like 21C##BC132750|METTL21C|196541|methyltransferase like 21C##NM_001146197|CCDC168|643677|coiled-coil domain containing 168	0.0	
chr14	76447834	76447925	reg1007403.p1	3.987	+	AK313564 TSC_hg19_v1_chr14_-_76447479 X14149 J03241	-408	-	TSC_hg19_v1_chr14_-_76447323 BC018503 EF560714	-549	-	BT007287 AB590825 TSC_hg19_v1_chr14_-_76447259	-632	-	NM_003239	212	-	TSC_hg19_v1_chr14_+_76452112 NM_001102564 NM_052873 AK302944 AK056735 BC032566 BC010436 BC042852 CU679711	4213	+	TSC_hg19_v1_chr14_+_76618258 NM_017926 NM_017972 BC058032	170377	+	AK313564|TGFB3|7043|transforming growth factor, beta 3##X14149|TGFB3|7043|transforming growth factor, beta 3##J03241|TGFB3|7043|transforming growth factor, beta 3##BC018503|TGFB3|7043|transforming growth factor, beta 3##EF560714|TGFB3|7043|transforming growth factor, beta 3##BT007287|TGFB3|7043|transforming growth factor, beta 3##NM_003239|TGFB3|7043|transforming growth factor, beta 3##NM_001102564|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##NM_052873|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##AK302944|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##AK056735|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##BC010436|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##BC042852|IFT43|112752|intraflagellar transport 43 homolog (Chlamydomonas)##NM_017926|C14orf118|55668|chromosome 14 open reading frame 118##NM_017972|C14orf118|55668|chromosome 14 open reading frame 118##BC058032|C14orf118|55668|chromosome 14 open reading frame 118	0.0	
chr16	24917676	24917762	reg1026706.p1	3.987	+	AY044906 NM_052944 AK298373 AK125267	-60126	+	TSC_hg19_v1_chr16_+_24802422 AL833757	-115238	+	AY035864 TSC_hg19_v1_chr16_+_24788680	-129095	+	TSC_hg19_v1_chr16_-_24942663 AK001170	24972	-	AK125358 TSC_hg19_v1_chr16_-_24968918	51173	-	AJ306731 AJ306732 TSC_hg19_v1_chr16_-_25026604	108893	-	AY044906|SLC5A11|115584|solute carrier family 5 (sodium/glucose cotransporter), member 11##NM_052944|SLC5A11|115584|solute carrier family 5 (sodium/glucose cotransporter), member 11##AK298373|SLC5A11|115584|solute carrier family 5 (sodium/glucose cotransporter), member 11##AK125267|SLC5A11|115584|solute carrier family 5 (sodium/glucose cotransporter), member 11##AL833757|TNRC6A|27327|trinucleotide repeat containing 6A##AY035864|TNRC6A|27327|trinucleotide repeat containing 6A##AK001170|ARHGAP17|55114|Rho GTPase activating protein 17##AK125358|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306731|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306732|ARHGAP17|55114|Rho GTPase activating protein 17	0.166615	
chr19	13936352	13936482	reg1032544.p1	3.987	+	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-30172	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-51133	+	TSC_hg19_v1_chr19_+_13885269 NM_014047	-51152	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	10685	-	BC101209 BC101210 NM_001098622	51645	+	AK097431 NM_024323	80491	-	AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##NM_014047|C19orf53|28974|chromosome 19 open reading frame 53##AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57	0.0	
chr19	5548086	5548152	reg1014243.p2	3.987	+	AK098722 NM_181710 AK292251 BC017592	-92693	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	-207325	-	TSC_hg19_v1_chr19_+_5032899 CU687848	-515220	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	74639	-	TSC_hg19_v1_chr19_-_5622794 NM_014649	74746	-	NM_001201338 NM_001201339 NM_001201340 NM_002967 TSC_hg19_v1_chr19_+_5623093 AK294718	74953	+	AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2##NM_014649|SAFB2|9667|scaffold attachment factor B2##NM_001201338|SAFB|6294|scaffold attachment factor B##NM_001201339|SAFB|6294|scaffold attachment factor B##NM_001201340|SAFB|6294|scaffold attachment factor B##NM_002967|SAFB|6294|scaffold attachment factor B##AK294718|SAFB|6294|scaffold attachment factor B	0.28095	
chr3	39225933	39226033	reg1036191.p1	3.987	+	NM_033027 TSC_hg19_v1_chr3_-_39195146	-30859	-	TSC_hg19_v1_chr3_-_39195053 BC038949 AB053121 BC028213	-30932	-	NM_001105513 NM_145755 AJ487015 BC062621 BC129948 AK022483 BC039691 AK302408 AK302465 CU687576	-76744	+	BC127119 BC139782 AY375160 NM_194293 TSC_hg19_v1_chr3_-_39234085 AJ626899 AJ626900 NM_001198621 AK096421 BX648565 CR749430	8102	-	U28934 BC028078 U20350 AK307911 AK312373 AK225764 BC017855 NM_001337	95519	-	NM_001171172	95946	-	NM_033027|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC038949|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##AB053121|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC028213|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##NM_001105513|TTC21A|199223|tetratricopeptide repeat domain 21A##NM_145755|TTC21A|199223|tetratricopeptide repeat domain 21A##AJ487015|TTC21A|199223|tetratricopeptide repeat domain 21A##BC062621|TTC21A|199223|tetratricopeptide repeat domain 21A##BC129948|TTC21A|199223|tetratricopeptide repeat domain 21A##AK022483|TTC21A|199223|tetratricopeptide repeat domain 21A##BC039691|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302408|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302465|TTC21A|199223|tetratricopeptide repeat domain 21A##BC127119|XIRP1|165904|xin actin-binding repeat containing 1##BC139782|XIRP1|165904|xin actin-binding repeat containing 1##AY375160|XIRP1|165904|xin actin-binding repeat containing 1##NM_194293|XIRP1|165904|xin actin-binding repeat containing 1##AJ626899|XIRP1|165904|xin actin-binding repeat containing 1##AJ626900|XIRP1|165904|xin actin-binding repeat containing 1##NM_001198621|XIRP1|165904|xin actin-binding repeat containing 1##AK096421|XIRP1|165904|xin actin-binding repeat containing 1##BX648565|XIRP1|165904|xin actin-binding repeat containing 1##CR749430|XIRP1|165904|xin actin-binding repeat containing 1##U28934|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC028078|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##U20350|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK307911|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK312373|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK225764|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC017855|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001337|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171172|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1	0.835616	CTCF.p2:20:0.836
chr3	53880348	53880458	reg1036053.p1	3.987	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	-351292	+	TSC_hg19_v1_chr3_+_53528709 M76558	-351744	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	-498810	-	TSC_hg19_v1_chr3_-_53880427 NM_018397	16	-	TSC_hg19_v1_chr3_+_53880576 NM_018725	169	+	TSC_hg19_v1_chr3_+_53880594 AK307749	192	+	NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018397|CHDH|55349|choline dehydrogenase##NM_018725|IL17RB|55540|interleukin 17 receptor B##AK307749|IL17RB|55540|interleukin 17 receptor B	0.0	
chr6	120595826	120595942	reg1034639.p1	3.987	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-924963	-	BX538186 AK091682 AX747126 NM_001100411	-1125538	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-1195976	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	1059759	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	1160941	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	2124811	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.881004	CTCF.p2:11:0.881
chr7	2353468	2353601	reg1034386.p2	3.987	+	BC065367 AB025238 AB025239 AB025242 NM_198953 NM_198954 BC022818 BC040144 CU677071	-71001	+	AB025233 NM_002452 NM_198948 NM_198949 BC051375 AB025234 AB025235 AB025240 BC014618 AK026631 AB025236 AB025237 AB025241 NM_198950 NM_198952	-71659	+	TSC_hg19_v1_chr7_-_2281824 BC017181 AF093415 NM_013393 AK302060	-71701	-	TSC_hg19_v1_chr7_-_2354018 BC007785	490	-	TSC_hg19_v1_chr7_-_2354077 CU692368 DQ892508 DQ895722 AK074544 AF121858 AK315670 BC021565 NM_013321	540	-	TSC_hg19_v1_chr7_+_2394488 NM_001037283 NM_003751 AK302058	40928	+	BC065367|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025238|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025239|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025242|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198953|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198954|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC022818|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC040144|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025233|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_002452|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198948|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198949|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC051375|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025234|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025235|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025240|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC014618|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AK026631|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025236|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025237|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025241|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198950|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198952|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC017181|FTSJ2|29960|FtsJ homolog 2 (E. coli)##AF093415|FTSJ2|29960|FtsJ homolog 2 (E. coli)##NM_013393|FTSJ2|29960|FtsJ homolog 2 (E. coli)##AK302060|FTSJ2|29960|FtsJ homolog 2 (E. coli)##BC007785|SNX8|29886|sorting nexin 8##DQ892508|SNX8|29886|sorting nexin 8##DQ895722|SNX8|29886|sorting nexin 8##AK074544|SNX8|29886|sorting nexin 8##AF121858|SNX8|29886|sorting nexin 8##AK315670|SNX8|29886|sorting nexin 8##BC021565|SNX8|29886|sorting nexin 8##NM_013321|SNX8|29886|sorting nexin 8##NM_001037283|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##NM_003751|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##AK302058|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B	0.0	
chr8	144766452	144766595	reg1035068.p1	3.987	+	AB014528 BC067516 BC067517 BC067518 NM_014789 BC075056 BC075057 AB463373 EU446754	-34588	+	TSC_hg19_v1_chr8_+_144718213 BC112898 NM_001082480	-48239	+	TSC_hg19_v1_chr8_+_144718195 AK294695	-48332	+	TSC_hg19_v1_chr8_+_144766648 NM_001100598 NM_001100599 NM_173831 AK001126 AK290432 AK055198 AK300926 AK055263 BC014894	117	+	TSC_hg19_v1_chr8_+_144766677 AK095138	154	+	NM_001162914	23755	-	AB014528|ZNF623|9831|zinc finger protein 623##BC067516|ZNF623|9831|zinc finger protein 623##BC067517|ZNF623|9831|zinc finger protein 623##BC067518|ZNF623|9831|zinc finger protein 623##NM_014789|ZNF623|9831|zinc finger protein 623##BC075056|ZNF623|9831|zinc finger protein 623##BC075057|ZNF623|9831|zinc finger protein 623##EU446754|ZNF623|9831|zinc finger protein 623##BC112898|ZNF623|9831|zinc finger protein 623##NM_001082480|ZNF623|9831|zinc finger protein 623##AK294695|ZNF623|9831|zinc finger protein 623##NM_001100598|ZNF707|286075|zinc finger protein 707##NM_001100599|ZNF707|286075|zinc finger protein 707##NM_173831|ZNF707|286075|zinc finger protein 707##AK001126|ZNF707|286075|zinc finger protein 707##AK290432|ZNF707|286075|zinc finger protein 707##AK055198|ZNF707|286075|zinc finger protein 707##AK055263|ZNF707|286075|zinc finger protein 707##BC014894|ZNF707|286075|zinc finger protein 707##AK095138|ZNF707|286075|zinc finger protein 707##NM_001162914|CCDC166|100130274|coiled-coil domain containing 166	0.0	
chr1	218856722	218856800	reg1033694.p2	3.986	+	M19154 TSC_hg19_v1_chr1_+_218519634	-337156	+	NM_001135599 NM_003238 TSC_hg19_v1_chr1_+_218518677 AB209842	-338050	+	AK290066 BC003668 TSC_hg19_v1_chr1_+_218458652 BC020641 AF151873	-398092	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	490397	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	490481	+	BC036078 TSC_hg19_v1_chr1_-_220101540	1244768	-	M19154|TGFB2|7042|transforming growth factor, beta 2##NM_001135599|TGFB2|7042|transforming growth factor, beta 2##NM_003238|TGFB2|7042|transforming growth factor, beta 2##AB209842|TGFB2|7042|transforming growth factor, beta 2##AK290066|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC003668|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC020641|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AF151873|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##BC036078|SLC30A10|55532|solute carrier family 30, member 10	0.0	
chr12	46736558	46736738	reg1012971.p2	3.986	+	NM_001077484 NM_030674	-73441	-	BX647547 TSC_hg19_v1_chr12_-_46662796 AK225639 AF271070 BX648495 AK225778 AK308129	-73830	-	TSC_hg19_v1_chr12_-_46662776 BC010620 BX648676	-73905	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	29641	-	TSC_hg19_v1_chr12_-_46766619 NM_018976	29955	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	483108	-	NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##BX647547|SLC38A1|81539|solute carrier family 38, member 1##AK225639|SLC38A1|81539|solute carrier family 38, member 1##AF271070|SLC38A1|81539|solute carrier family 38, member 1##BX648495|SLC38A1|81539|solute carrier family 38, member 1##AK225778|SLC38A1|81539|solute carrier family 38, member 1##AK308129|SLC38A1|81539|solute carrier family 38, member 1##BC010620|SLC38A1|81539|solute carrier family 38, member 1##BX648676|SLC38A1|81539|solute carrier family 38, member 1##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4	0.0	
chr12	76414643	76414764	reg1033088.p1	3.986	+	BC005225 TSC_hg19_v1_chr12_-_75905414 NM_007043	-509284	-	BC033887 TSC_hg19_v1_chr12_-_75905393 BC014034 BC026107	-509308	-	AK022133 TSC_hg19_v1_chr12_-_75905382 BC016778 U55766	-509318	-	AF220656 TSC_hg19_v1_chr12_-_76424608	9844	-	TSC_hg19_v1_chr12_-_76425369 BC126425 BC130427 BC110820 U92983 BC018929	10587	-	TSC_hg19_v1_chr12_-_76425376 AK304224 AB587598 NM_007350 Z50194	10824	-	BC005225|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##NM_007043|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC033887|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC014034|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC026107|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK022133|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC016778|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##U55766|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AF220656|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC126425|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC130427|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC110820|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##U92983|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC018929|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##AK304224|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##NM_007350|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##Z50194|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1	0.0	
chr1	33238501	33238656	reg1001363.p1	3.986	+	TSC_hg19_v1_chr1_+_33231274 AB040955	-7307	+	TSC_hg19_v1_chr1_+_33231234 AK298965 NM_001198972 NM_001198973	-7347	+	TSC_hg19_v1_chr1_+_33219620 AB384615	-18963	+	U40714 U89436 DQ891666 DQ894853 TSC_hg19_v1_chr1_-_33282932 BC001933 BC004151 BC016689 AK026535 AK223608	44341	-	AK090711 AX746586 TSC_hg19_v1_chr1_+_33283180 BX647916 NM_001017406 NM_022753 BX647667	44539	+	TSC_hg19_v1_chr1_+_33283215 BC015175	44734	+	AB040955|KIAA1522|57648|KIAA1522##AK298965|KIAA1522|57648|KIAA1522##NM_001198972|KIAA1522|57648|KIAA1522##NM_001198973|KIAA1522|57648|KIAA1522##U40714|YARS|8565|tyrosyl-tRNA synthetase##U89436|YARS|8565|tyrosyl-tRNA synthetase##DQ891666|YARS|8565|tyrosyl-tRNA synthetase##DQ894853|YARS|8565|tyrosyl-tRNA synthetase##BC001933|YARS|8565|tyrosyl-tRNA synthetase##BC004151|YARS|8565|tyrosyl-tRNA synthetase##BC016689|YARS|8565|tyrosyl-tRNA synthetase##AK026535|YARS|8565|tyrosyl-tRNA synthetase##AK223608|YARS|8565|tyrosyl-tRNA synthetase##AK090711|S100PBP|64766|S100P binding protein##BX647916|S100PBP|64766|S100P binding protein##NM_001017406|S100PBP|64766|S100P binding protein##NM_022753|S100PBP|64766|S100P binding protein##BX647667|S100PBP|64766|S100P binding protein##BC015175|S100PBP|64766|S100P binding protein	0.0	
chr17	70461595	70461761	reg1024418.p1	3.986	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-344438	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-344508	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-344519	+	AK000477 TSC_hg19_v1_chr17_-_70588944	127265	-	AF331643 TSC_hg19_v1_chr17_-_71088816	627138	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	627145	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr2	134733370	134733464	reg1033475.p2	3.986	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-407379	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-554063	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-1193723	-	NM_002410 D17716 AF113921	278468	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	743139	-	AK125008 NM_138326 BC016018 BC107420 AB071418	862801	+	AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	0.0	
chr3	52287430	52287577	reg1029877.p1	3.986	+	AK056894 NM_001122870 BC009644	-7299	+	TSC_hg19_v1_chr3_+_52279770 NM_144641 AB474372 AK096681	-7676	+	TSC_hg19_v1_chr3_+_52273270 BC039681	-14240	+	BC018941 AK074290 TSC_hg19_v1_chr3_-_52294468	6944	-	TSC_hg19_v1_chr3_-_52312406 AB590669 AY358264 BX648628 AK291380	24887	-	TSC_hg19_v1_chr3_-_52312656 NM_025222	25153	-	AK056894|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##NM_001122870|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##BC009644|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##NM_144641|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##AB474372|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##AK096681|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##BC018941|WDR82|80335|WD repeat domain 82##AK074290|WDR82|80335|WD repeat domain 82##AY358264|WDR82|80335|WD repeat domain 82##BX648628|WDR82|80335|WD repeat domain 82##AK291380|WDR82|80335|WD repeat domain 82##NM_025222|WDR82|80335|WD repeat domain 82	0.0	
chrY	1540722	1540903	reg1034525.p1	3.986	+	AK301844 NM_001173473	-18161	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-19011	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-79843	-	BC043610 GQ280263 NM_178129 AK126147	65226	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	119717	+	NM_004043 U11090	123535	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr10	11199605	11199695	reg1029533.p1	3.985	+	U69546 TSC_hg19_v1_chr10_+_11060121	-139534	+	AF090694 TSC_hg19_v1_chr10_+_11060072	-139579	+	TSC_hg19_v1_chr10_+_11059882 AK314087 NM_006561 BC036391	-139760	+	AK299983 NM_001025076 NM_001083591 TSC_hg19_v1_chr10_+_11207008	7319	+	AK297313 TSC_hg19_v1_chr10_+_11207057 AK299992 AF036956 AK293164 AF432906	7446	+	TSC_hg19_v1_chr10_+_11207244 AK316354	7595	+	U69546|CELF2|10659|CUGBP, Elav-like family member 2##AF090694|CELF2|10659|CUGBP, Elav-like family member 2##AK314087|CELF2|10659|CUGBP, Elav-like family member 2##NM_006561|CELF2|10659|CUGBP, Elav-like family member 2##BC036391|CELF2|10659|CUGBP, Elav-like family member 2##AK299983|CELF2|10659|CUGBP, Elav-like family member 2##NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2##NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2##AK297313|CELF2|10659|CUGBP, Elav-like family member 2##AK299992|CELF2|10659|CUGBP, Elav-like family member 2##AF036956|CELF2|10659|CUGBP, Elav-like family member 2##AK293164|CELF2|10659|CUGBP, Elav-like family member 2##AF432906|CELF2|10659|CUGBP, Elav-like family member 2##AK316354|CELF2|10659|CUGBP, Elav-like family member 2	0.0	
chr12	104350905	104351011	reg1032606.p1	3.985	+	TSC_hg19_v1_chr12_-_104350994 BC039467 BC073939 AK024037 BC063467 NM_001135570	-13	-	TSC_hg19_v1_chr12_+_104324215 AB209534 BC009195	-26737	+	TSC_hg19_v1_chr12_+_104324199 BC066656	-26759	+	BC044618 TSC_hg19_v1_chr12_-_104359508	8533	-	TSC_hg19_v1_chr12_+_104359670 NM_003211 AK311673 AK303631 AK309792 BC010945 BC019925 BC037557 AK313234 BC071714 AK299832 BC104477 AB590808	8728	+	AY358763 AK027310 TSC_hg19_v1_chr12_-_104443809	92796	-	BC039467|C12orf73|728568|chromosome 12 open reading frame 73##BC073939|C12orf73|728568|chromosome 12 open reading frame 73##AK024037|C12orf73|728568|chromosome 12 open reading frame 73##BC063467|C12orf73|728568|chromosome 12 open reading frame 73##NM_001135570|C12orf73|728568|chromosome 12 open reading frame 73##AB209534|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##BC009195|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##BC066656|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##BC044618|C12orf73|728568|chromosome 12 open reading frame 73##NM_003211|TDG|6996|thymine-DNA glycosylase##AK311673|TDG|6996|thymine-DNA glycosylase##AK303631|TDG|6996|thymine-DNA glycosylase##AK309792|TDG|6996|thymine-DNA glycosylase##BC010945|TDG|6996|thymine-DNA glycosylase##BC019925|TDG|6996|thymine-DNA glycosylase##BC037557|TDG|6996|thymine-DNA glycosylase##AK313234|TDG|6996|thymine-DNA glycosylase##BC071714|TDG|6996|thymine-DNA glycosylase##AK299832|TDG|6996|thymine-DNA glycosylase##BC104477|TDG|6996|thymine-DNA glycosylase##AY358763|GLT8D2|83468|glycosyltransferase 8 domain containing 2##AK027310|GLT8D2|83468|glycosyltransferase 8 domain containing 2	0.0	
chr14	69829879	69830060	reg1038669.p2	3.985	+	AK299588 TSC_hg19_v1_chr14_+_69726876 AB032956 BC122545 BC098578 AK315848 AK289745 BC036812 AB384119 AB078143 AJ505951	-103032	+	NM_001168368 NM_020692	-103289	+	AK292563 NM_001193362 NM_001193363 AK295601 BX161412	-171453	+	BC071709 TSC_hg19_v1_chr14_-_69865012 BC014301 AK130850 AK312186 D85758 NM_004450 U66871	35034	-	NM_001252151 NM_001252152 AK293222 AK316381 TSC_hg19_v1_chr14_+_69865137	35149	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	35426	+	AK299588|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AB032956|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC122545|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC098578|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK315848|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK289745|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##BC036812|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AB078143|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AJ505951|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##NM_001168368|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##NM_020692|GALNTL1|57452|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 1##AK292563|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001193362|EXD2|55218|exonuclease 3'-5' domain containing 2##NM_001193363|EXD2|55218|exonuclease 3'-5' domain containing 2##AK295601|EXD2|55218|exonuclease 3'-5' domain containing 2##BX161412|EXD2|55218|exonuclease 3'-5' domain containing 2##BC071709|ERH|2079|enhancer of rudimentary homolog (Drosophila)##BC014301|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK130850|ERH|2079|enhancer of rudimentary homolog (Drosophila)##AK312186|ERH|2079|enhancer of rudimentary homolog (Drosophila)##D85758|ERH|2079|enhancer of rudimentary homolog (Drosophila)##NM_004450|ERH|2079|enhancer of rudimentary homolog (Drosophila)##U66871|ERH|2079|enhancer of rudimentary homolog (Drosophila)##NM_001252151|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252152|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK293222|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK316381|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9	0.672734	CTCF.p2:-47:0.560
chr1	89401740	89401849	reg1034171.p1	3.985	+	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	-44521	-	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	-44583	-	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	-251699	+	TSC_hg19_v1_chr1_-_89458288 AL833593 BC012942 CR627392 AK301326 AK315917 AK057176 AY028624	56565	-	NM_001008661 NM_001008662 NM_001162536 NM_019610	56848	-	JF927951 BC140837 BC144650 BC063819 CR936758 AK001823 BC017992 AK309096 AL136680 CR936755 NM_018284	86686	-	AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AL833593|CCBL2|56267|cysteine conjugate-beta lyase 2##BC012942|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##CR627392|CCBL2|56267|cysteine conjugate-beta lyase 2##AK301326|CCBL2|56267|cysteine conjugate-beta lyase 2##AK315917|CCBL2|56267|cysteine conjugate-beta lyase 2##AK057176|CCBL2|56267|cysteine conjugate-beta lyase 2##AY028624|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001008661|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001008662|CCBL2|56267|cysteine conjugate-beta lyase 2##NM_001162536|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##NM_019610|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##JF927951|GBP3|2635|guanylate binding protein 3##BC140837|GBP3|2635|guanylate binding protein 3##BC144650|GBP3|2635|guanylate binding protein 3##BC063819|GBP3|2635|guanylate binding protein 3##CR936758|GBP3|2635|guanylate binding protein 3##AK001823|GBP3|2635|guanylate binding protein 3##BC017992|GBP3|2635|guanylate binding protein 3##AK309096|GBP3|2635|guanylate binding protein 3##AL136680|GBP3|2635|guanylate binding protein 3##CR936755|GBP3|2635|guanylate binding protein 3##NM_018284|GBP3|2635|guanylate binding protein 3	0.999095	CTCF.p2:3:0.999
chr19	16136582	16136710	reg1034697.p1	3.985	+	NM_001004465	-76829	+	TSC_hg19_v1_chr19_-_16045678 BC016853 NM_001128932 NM_021187	-90973	-	BC067437 BC067438 BC067439 BC067440 D26480 AK313705 U02388 AK300961 TSC_hg19_v1_chr19_-_16008885 AK290790 AK296200 NM_001082	-127769	-	BC031284 TSC_hg19_v1_chr19_+_16145007	8322	+	TSC_hg19_v1_chr19_+_16178347 NM_001145160 AK023385	41614	+	TSC_hg19_v1_chr19_+_16187132 NM_003290	50454	+	NM_001004465|OR10H4|126541|olfactory receptor, family 10, subfamily H, member 4##BC016853|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_001128932|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##NM_021187|CYP4F11|57834|cytochrome P450, family 4, subfamily F, polypeptide 11##BC067437|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##BC067438|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##BC067439|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##BC067440|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##D26480|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##AK313705|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##U02388|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##AK300961|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##AK290790|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##AK296200|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##NM_001082|CYP4F2|8529|cytochrome P450, family 4, subfamily F, polypeptide 2##BC031284|FLJ25328|148231|uncharacterized LOC148231##NM_001145160|TPM4|7171|tropomyosin 4##AK023385|TPM4|7171|tropomyosin 4##NM_003290|TPM4|7171|tropomyosin 4	0.979261	CTCF.p2:-6:0.979
chr19	21881117	21881295	reg1037120.p2	3.985	+	TSC_hg19_v1_chr19_+_21688403 AK308708 NM_001001415 AF325191 AY269786	-192781	+	CR627135 TSC_hg19_v1_chr19_-_21646716	-234501	-	TSC_hg19_v1_chr19_+_21579931 NM_001076678 NM_145326 NM_175910 BX648842 AK092178 AK128494 AB209086 BC006408 BC022394 AX721142 EU446562	-301245	+	BC035579 TSC_hg19_v1_chr19_-_21950382 AK308798 AK126551 NM_173531	69169	-	TSC_hg19_v1_chr19_-_22018985 M61869 NM_003423 BC006528	137775	-	X59244 AK291353 CR933640 TSC_hg19_v1_chr19_-_22034868	153625	-	AK308708|ZNF429|353088|zinc finger protein 429##NM_001001415|ZNF429|353088|zinc finger protein 429##AF325191|ZNF429|353088|zinc finger protein 429##AY269786|ZNF429|353088|zinc finger protein 429##NM_001076678|ZNF493|284443|zinc finger protein 493##NM_145326|ZNF493|284443|zinc finger protein 493##NM_175910|ZNF493|284443|zinc finger protein 493##BX648842|ZNF493|284443|zinc finger protein 493##AK092178|ZNF493|284443|zinc finger protein 493##AK128494|ZNF493|284443|zinc finger protein 493##AB209086|ZNF493|284443|zinc finger protein 493##BC006408|ZNF493|284443|zinc finger protein 493##BC022394|ZNF493|284443|zinc finger protein 493##EU446562|ZNF493|284443|zinc finger protein 493##BC035579|ZNF100|163227|zinc finger protein 100##AK308798|ZNF100|163227|zinc finger protein 100##AK126551|ZNF100|163227|zinc finger protein 100##NM_173531|ZNF100|163227|zinc finger protein 100##M61869|ZNF43|7594|zinc finger protein 43##NM_003423|ZNF43|7594|zinc finger protein 43##BC006528|ZNF43|7594|zinc finger protein 43##X59244|ZNF43|7594|zinc finger protein 43##AK291353|ZNF43|7594|zinc finger protein 43##CR933640|ZNF43|7594|zinc finger protein 43	0.35994	CTCF.p2:5:0.360
chr2	235405007	235405188	reg1035968.p1	3.985	+	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-445710	+	AY090109 NM_024080 BC126342 BC143819	-579052	+	TSC_hg19_v1_chr2_-_234777033 AK301707	-628060	-	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	622	-	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	455561	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	997706	+	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##AK301707|MSL3P1|151507|male-specific lethal 3 homolog (Drosophila) pseudogene 1##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.0	
chr3	123626724	123626810	reg1038440.p1	3.985	+	TSC_hg19_v1_chr3_-_123603158 BC064695 NM_053025 NM_053026 NM_053027 NM_053028	-23596	-	TSC_hg19_v1_chr3_-_123411207 AK300610	-215550	-	TSC_hg19_v1_chr3_-_123339426 NM_053031 NM_053032	-287291	-	TSC_hg19_v1_chr3_-_123680077 AK123060 AK307847 AK294979 BC040285	53319	-	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	53488	-	AF303889 NM_017578	83431	-	BC064695|MYLK|4638|myosin light chain kinase##NM_053025|MYLK|4638|myosin light chain kinase##NM_053026|MYLK|4638|myosin light chain kinase##NM_053027|MYLK|4638|myosin light chain kinase##NM_053028|MYLK|4638|myosin light chain kinase##AK300610|MYLK|4638|myosin light chain kinase##NM_053031|MYLK|4638|myosin light chain kinase##NM_053032|MYLK|4638|myosin light chain kinase##AK123060|CCDC14|64770|coiled-coil domain containing 14##AK307847|CCDC14|64770|coiled-coil domain containing 14##AK294979|CCDC14|64770|coiled-coil domain containing 14##BC040285|CCDC14|64770|coiled-coil domain containing 14##AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1	0.12711	
chr3	196764235	196764350	reg1035074.p1	3.985	+	TSC_hg19_v1_chr3_-_196756689 NM_033316 NM_005929	-7590	-	BT007377 AB527337 M12154 BC093920 BC111947 BC143257 BC002623 BC001875 BC007550 BC053510 BC071910 TSC_hg19_v1_chr3_-_196756658 BC032752	-7669	-	BC032042 TSC_hg19_v1_chr3_+_196729798	-34482	+	AK294855 NM_001204387 NM_001204388	146709	-	TSC_hg19_v1_chr3_-_197024987 BC015560 BC028486 AK310893	260641	-	BC140841 BC144651 TSC_hg19_v1_chr3_-_197025506 AK304280 NM_001098424 NM_001204386 NM_004087 U13896 U13897 AK310596	261182	-	NM_033316|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_005929|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BT007377|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##M12154|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC093920|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC111947|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC143257|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC002623|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC001875|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC007550|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC053510|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC071910|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC032752|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC032042|MFI2-AS1|100507057|MFI2 antisense RNA 1 (non-protein coding)##AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)##BC015560|DLG1|1739|discs, large homolog 1 (Drosophila)##BC028486|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310893|DLG1|1739|discs, large homolog 1 (Drosophila)##BC140841|DLG1|1739|discs, large homolog 1 (Drosophila)##BC144651|DLG1|1739|discs, large homolog 1 (Drosophila)##AK304280|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001098424|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204386|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_004087|DLG1|1739|discs, large homolog 1 (Drosophila)##U13896|DLG1|1739|discs, large homolog 1 (Drosophila)##U13897|DLG1|1739|discs, large homolog 1 (Drosophila)##AK310596|DLG1|1739|discs, large homolog 1 (Drosophila)	0.0	
chr4	11430904	11431080	reg1010618.p4	3.985	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-460	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-744591	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-971982	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2054959	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2054983	-	AB463932 AF009801 EU446467 BC111966 NM_001189	2115083	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.0	
chr6	160390744	160390924	reg1028306.p1	3.985	+	TSC_hg19_v1_chr6_+_160390137 NM_000876 Y00285 J03528	-701	+	BC069142 BC069581 BC110454 NM_002377 CU686912 CR542261	-62855	+	TSC_hg19_v1_chr6_+_160221313 AK097559 NM_173516 AK093139 AX747947 BC112246	-169491	+	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	152080	+	CU689064 BC039899 AK290787 X98333 AB075951 BC030978 NM_003058	289041	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	378560	+	NM_000876|IGF2R|3482|insulin-like growth factor 2 receptor##Y00285|IGF2R|3482|insulin-like growth factor 2 receptor##J03528|IGF2R|3482|insulin-like growth factor 2 receptor##BC069142|MAS1|4142|MAS1 oncogene##BC069581|MAS1|4142|MAS1 oncogene##BC110454|MAS1|4142|MAS1 oncogene##NM_002377|MAS1|4142|MAS1 oncogene##CR542261|MAS1|4142|MAS1 oncogene##AK097559|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_173516|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##AK093139|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##BC112246|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC039899|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AK290787|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##X98333|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AB075951|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC030978|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003058|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3	0.0	
chr6	3511803	3511878	reg1028654.p1	3.985	+	BC040876 NM_015482	-55077	-	TSC_hg19_v1_chr6_-_3456513 AL110245	-55326	-	BC128580 BC128581 BC038748 NM_021945	-66633	-	TSC_hg19_v1_chr6_-_3720312 BC031944	208470	-	NM_183373 TSC_hg19_v1_chr6_-_3752248	240406	-	BC001261 NM_012135 Y18503	337786	+	BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##BC128580|SLC22A23|63027|solute carrier family 22, member 23##BC128581|SLC22A23|63027|solute carrier family 22, member 23##BC038748|SLC22A23|63027|solute carrier family 22, member 23##NM_021945|SLC22A23|63027|solute carrier family 22, member 23##NM_183373|PXDC1|221749|PX domain containing 1##BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B	0.812758	CTCF.p2:4:0.813
chr7	99642604	99642693	reg1027328.p2	3.985	+	TSC_hg19_v1_chr7_+_99627917 U09848	-14710	+	BC112224 BC113697 CU692588 EU446909 HQ258578 TSC_hg19_v1_chr7_+_99621246	-21483	+	TSC_hg19_v1_chr7_+_99613225 AL833578 NM_003439 AF454940 AK054676 AY260738 BC022378 BX640646 AK091471 AX747005 AK074116	-29423	+	AK075324 TSC_hg19_v1_chr7_+_99647394 AK292267 AK313884	4750	+	NM_145914 TSC_hg19_v1_chr7_+_99647416 CR749301 BC047309 AK301871	4782	+	TSC_hg19_v1_chr7_-_99679347 BC011887 BC025265 BC013603 AK297625 AF193057 AF217988 AK315479 AK091984 AX747291 NM_017715 NM_032924	36679	-	U09848|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC112224|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC113697|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##EU446909|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##HQ258578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AL833578|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##NM_003439|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AF454940|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK054676|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AY260738|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BC022378|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##BX640646|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK091471|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK074116|ZKSCAN1|7586|zinc finger with KRAB and SCAN domains 1##AK075324|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK292267|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK313884|ZSCAN21|7589|zinc finger and SCAN domain containing 21##NM_145914|ZSCAN21|7589|zinc finger and SCAN domain containing 21##CR749301|ZSCAN21|7589|zinc finger and SCAN domain containing 21##BC047309|ZSCAN21|7589|zinc finger and SCAN domain containing 21##AK301871|ZSCAN21|7589|zinc finger and SCAN domain containing 21##BC011887|ZNF3|7551|zinc finger protein 3##BC025265|ZNF3|7551|zinc finger protein 3##BC013603|ZNF3|7551|zinc finger protein 3##AK297625|ZNF3|7551|zinc finger protein 3##AF193057|ZNF3|7551|zinc finger protein 3##AF217988|ZNF3|7551|zinc finger protein 3##AK315479|ZNF3|7551|zinc finger protein 3##AK091984|ZNF3|7551|zinc finger protein 3##NM_017715|ZNF3|7551|zinc finger protein 3##NM_032924|ZNF3|7551|zinc finger protein 3	0.996524	
chr8	54034787	54034854	reg1031813.p1	3.985	+	BC069117 BC107101 NM_005285	-182353	+	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	-407807	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	-407834	-	BC099912 AK310407 AY168006 NM_000912 AY466378	129392	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	720859	-	AK022345 TSC_hg19_v1_chr8_-_54755834	721007	-	BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1##BC099912|OPRK1|4986|opioid receptor, kappa 1##AK310407|OPRK1|4986|opioid receptor, kappa 1##AY168006|OPRK1|4986|opioid receptor, kappa 1##NM_000912|OPRK1|4986|opioid receptor, kappa 1##AY466378|OPRK1|4986|opioid receptor, kappa 1##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H	0.0	
chrX	1363735	1363857	reg1031996.p1	3.985	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	-32212	-	NM_000451 NM_006883 U89331	-778718	+	AK293506 NM_013239	-1016107	-	NM_001161529 NM_001161531 NM_001161532 NM_006140 NM_172245 NM_172246 NM_172249 AK293086 AK301395 BC071835 M64445 BC002635 AL833597 AK309630 L29348 L29349 U93096 X17648	23918	+	NM_001161530 NM_172247 M73832 DQ893104 DQ896376 AB590144 CU687176 DQ841258 X54935	37787	+	BC035407 NM_002183	91712	+	AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2##NM_000451|SHOX|6473|short stature homeobox##NM_006883|SHOX|6473|short stature homeobox##U89331|SHOX|6473|short stature homeobox##AK293506|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_013239|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_001161529|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161531|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161532|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_006140|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172245|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172246|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172249|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK293086|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK301395|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC071835|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M64445|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC002635|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AL833597|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK309630|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29348|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29349|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##U93096|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X17648|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161530|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172247|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M73832|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ893104|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ896376|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ841258|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X54935|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC035407|IL3RA|3563|interleukin 3 receptor, alpha (low affinity)##NM_002183|IL3RA|3563|interleukin 3 receptor, alpha (low affinity)	0.828004	CTCF.p2:3:0.828
chr14	57669497	57669657	reg1032186.p1	3.984	+	AK314271 BC032579 NM_021728 AB593058	-392433	-	NM_172337 AB593056	-397214	-	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	-623032	+	CU691962 TSC_hg19_v1_chr14_-_57735388	65816	-	TSC_hg19_v1_chr14_-_57735546 U85946 AK295085 AK303531	65963	-	TSC_hg19_v1_chr14_-_57735559 BC041126 BC031298	66003	-	AK314271|OTX2|5015|orthodenticle homeobox 2##BC032579|OTX2|5015|orthodenticle homeobox 2##NM_021728|OTX2|5015|orthodenticle homeobox 2##AB593058|OTX2|5015|orthodenticle homeobox 2##NM_172337|OTX2|5015|orthodenticle homeobox 2##AB593056|OTX2|5015|orthodenticle homeobox 2##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101##U85946|EXOC5|10640|exocyst complex component 5##AK295085|EXOC5|10640|exocyst complex component 5##AK303531|EXOC5|10640|exocyst complex component 5##BC041126|EXOC5|10640|exocyst complex component 5##BC031298|EXOC5|10640|exocyst complex component 5	0.824097	CTCF.p2:32:0.824
chr22	23219745	23219831	reg1034030.p1	3.984	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	-6095	+	X62125 TSC_hg19_v1_chr22_+_23165276 AK129603 BC071804 BC033102 CU689610 L03633 HM996064 HM996172 AF124174 AF194540 AF194541 AF194542 AF194543 AF194544 AF194545 AF194546 AF194547 AF194548 AF194549 AF194550 AF194551 AF194552 AF194553 AF194554 AF194555 AF194556 AF194557 AF194558 AF194559 AF194560 AF194561 AF194562 AF194563 AF194564 AF194565 AF194566 AF194567 AF194568 AF194569 AF194570 AF194571 AF194572 AF194573 AF194574 AF194575 AF194576 AF194577 AJ388658 AJ697911 AM181371 AM183998 AM184000 AM184018 AY685383 AY942038 DQ098709 DQ098711 DQ098766 DQ098772 DQ098775 DQ098778 DQ098782 DQ322816 DQ322984 DQ322992 EF589387 EF589498 EF589544 GU086862 L26532 Y09387 AM184068 DQ098712 DQ098779 AJ399866 AY050712 DQ322899 DQ322900 DQ322979 L21956 S67988 AY950800 U09888 U09892 Y08149 AF103683 AF044486 AY962389 AF092503 AJ408283 DQ098753 Z46858 DQ098738 DQ098739 DQ098762 L38428 DQ098710 AF103704 AF103701 AF103718 AF490954 AF490947 AF103709 AF103640 AF103644 AF103645 AF103647 AF103697 AF103698 AF103700 U87151	-54393	+	TSC_hg19_v1_chr22_+_23154240 L29158 L29159 L29160 L29161 L29164 BC032452 BC089414 AY190827 X57810 L26902	-65513	+	TSC_hg19_v1_chr22_+_23222900 AK127411 S77601 X57802 X57803 X57816 X57818 AB369252 AF026919 AF026925 AY190825 L26400 AF490955 AF490961	3141	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	10295	+	TSC_hg19_v1_chr22_+_23412527 BC037333 BC026342 NM_002073	192728	+	BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3##AB369252|CYAT1|100290481|immunoglobulin lambda light chain-like##AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC037333|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC026342|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##NM_002073|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide	0.949684	CTCF.p2:7:0.950
chr3	46887391	46887521	reg1033791.p1	3.984	+	AJ544583 NM_182702 AB587436	-11872	-	BC133695 NM_199183	-101212	-	AK097666 NM_001205271	-109537	-	AF174483 CU679491 X07373 M24122 AK312044 BC009790 NM_000258	17469	-	BC112221 BC112247 NM_000316 U17418 X68596	31793	+	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	36286	+	AJ544583|PRSS42|339906|protease, serine, 42##NM_182702|PRSS42|339906|protease, serine, 42##BC133695|PRSS45|377047|protease, serine, 45##NM_199183|PRSS45|377047|protease, serine, 45##NM_001205271|PRSS46|100287362|protease, serine, 46##AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC112221|PTH1R|5745|parathyroid hormone 1 receptor##BC112247|PTH1R|5745|parathyroid hormone 1 receptor##NM_000316|PTH1R|5745|parathyroid hormone 1 receptor##U17418|PTH1R|5745|parathyroid hormone 1 receptor##X68596|PTH1R|5745|parathyroid hormone 1 receptor##BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor	0.926147	CTCF.p2:76:0.926
chr5	68663861	68663960	reg1030960.p2	3.984	+	AB024692 BC108715 BC113749 NM_176816	-47556	-	AK026509 TSC_hg19_v1_chr5_+_68530769 X77303 X77743 BC000834 AB385525 AM392563 AM392604 AM392628 AM393110 CU674418 CU675099	-133141	+	TSC_hg19_v1_chr5_+_68530713 BC005298 L20320 X79193	-133194	+	AL122068 NM_133343	1213	+	TSC_hg19_v1_chr5_-_68665348 EU831966 EU832059 U21858 BC007349 BC007426 BC003400 AJ878880 AJ878881 AF151895 NM_003187 NM_016283	1452	-	AK292487 TSC_hg19_v1_chr5_+_68665644 AF126424 NM_133338 NM_133342 NM_133344 BC018110 AF017748	1702	+	AB024692|CCDC125|202243|coiled-coil domain containing 125##BC108715|CCDC125|202243|coiled-coil domain containing 125##BC113749|CCDC125|202243|coiled-coil domain containing 125##NM_176816|CCDC125|202243|coiled-coil domain containing 125##AK026509|CDK7|1022|cyclin-dependent kinase 7##X77303|CDK7|1022|cyclin-dependent kinase 7##X77743|CDK7|1022|cyclin-dependent kinase 7##BC000834|CDK7|1022|cyclin-dependent kinase 7##AM392563|CDK7|1022|cyclin-dependent kinase 7##AM392604|CDK7|1022|cyclin-dependent kinase 7##AM392628|CDK7|1022|cyclin-dependent kinase 7##AM393110|CDK7|1022|cyclin-dependent kinase 7##BC005298|CDK7|1022|cyclin-dependent kinase 7##L20320|CDK7|1022|cyclin-dependent kinase 7##X79193|CDK7|1022|cyclin-dependent kinase 7##AL122068|RAD17|5884|RAD17 homolog (S. pombe)##NM_133343|RAD17|5884|RAD17 homolog (S. pombe)##EU831966|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##EU832059|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##U21858|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##BC007349|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##BC007426|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##BC003400|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##AJ878880|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##AJ878881|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##AF151895|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##NM_003187|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##NM_016283|TAF9|6880|TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa##AK292487|RAD17|5884|RAD17 homolog (S. pombe)##AF126424|RAD17|5884|RAD17 homolog (S. pombe)##NM_133338|RAD17|5884|RAD17 homolog (S. pombe)##NM_133342|RAD17|5884|RAD17 homolog (S. pombe)##NM_133344|RAD17|5884|RAD17 homolog (S. pombe)##BC018110|RAD17|5884|RAD17 homolog (S. pombe)##AF017748|RAD17|5884|RAD17 homolog (S. pombe)	0.0	
chr6	21037828	21037960	reg1032097.p1	3.984	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-503171	+	CR749285 NM_001243076	-633861	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-635791	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	556478	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	628765	+	BC015850 NM_000948	1259835	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.026135	
chr7	36323108	36323174	reg1028060.p1	3.984	+	TSC_hg19_v1_chr7_+_36193025 AB051493	-130086	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	-130258	+	TSC_hg19_v1_chr7_+_36192789 NM_030636	-130336	+	TSC_hg19_v1_chr7_-_36406811 BC056191 AB384038 BC136362 BC144032 AB020702 BC110422 NM_001199707 AK293912 AK294686 AK302559 NM_001199706 NM_015314 NM_001199708	83531	-	TSC_hg19_v1_chr7_+_36429470 BC070066 NM_018685 AK299803 AK291254 AF273437	106299	+	BC028678 NM_001100425	106573	-	AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##NM_030636|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC056191|KIAA0895|23366|KIAA0895##BC136362|KIAA0895|23366|KIAA0895##BC144032|KIAA0895|23366|KIAA0895##AB020702|KIAA0895|23366|KIAA0895##BC110422|KIAA0895|23366|KIAA0895##NM_001199707|KIAA0895|23366|KIAA0895##AK293912|KIAA0895|23366|KIAA0895##AK294686|KIAA0895|23366|KIAA0895##AK302559|KIAA0895|23366|KIAA0895##NM_001199706|KIAA0895|23366|KIAA0895##NM_015314|KIAA0895|23366|KIAA0895##NM_001199708|KIAA0895|23366|KIAA0895##BC070066|ANLN|54443|anillin, actin binding protein##NM_018685|ANLN|54443|anillin, actin binding protein##AK299803|ANLN|54443|anillin, actin binding protein##AK291254|ANLN|54443|anillin, actin binding protein##AF273437|ANLN|54443|anillin, actin binding protein##BC028678|KIAA0895|23366|KIAA0895##NM_001100425|KIAA0895|23366|KIAA0895	0.0	
chr8	74789835	74789942	reg1034677.p1	3.984	+	AK290141 NM_001164384	-129946	-	TSC_hg19_v1_chr8_-_74659707 AK307841 AK293729	-130192	-	TSC_hg19_v1_chr8_-_74659103 AK294466 CR627442 NM_001164380 NM_001164381 NM_001164382 NM_001164383 NM_001164385 NM_014393	-130730	-	TSC_hg19_v1_chr8_-_74791061 AK001873 AK021735 BC010900 EU446497 BX538145	1172	-	TSC_hg19_v1_chr8_-_74791074 BX648427 AK225554	1186	-	TSC_hg19_v1_chr8_-_74791084 AY948289	1193	-	AK290141|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164384|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK307841|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK293729|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK294466|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##CR627442|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164380|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164381|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164382|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164383|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_001164385|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##NM_014393|STAU2|27067|staufen, RNA binding protein, homolog 2 (Drosophila)##AK001873|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)##AK021735|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)##BC010900|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)##EU446497|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)##BX538145|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)##BX648427|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)##AK225554|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)##AY948289|UBE2W|55284|ubiquitin-conjugating enzyme E2W (putative)	0.0	
chr9	94422274	94422385	reg1031954.p2	3.984	+	TSC_hg19_v1_chr9_-_94186159 NM_005384	-236147	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	-236285	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	-298130	-	TSC_hg19_v1_chr9_-_94711095 BC033697	288799	-	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	290060	-	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	455335	-	NM_005384|NFIL3|4783|nuclear factor, interleukin 3 regulated##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1	0.0	
chr10	112631256	112631380	reg1037536.p1	3.983	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-227189	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-287203	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-303826	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	294	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	396	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	47378	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.0	
chr10	116581228	116581409	reg1031936.p1	3.983	+	TSC_hg19_v1_chr10_-_116528049 AK057834	-53310	-	TSC_hg19_v1_chr10_-_116444374 NM_001003407 NM_001003408	-136925	-	AB462929 TSC_hg19_v1_chr10_-_116444183 D31883	-137155	-	TSC_hg19_v1_chr10_+_116581525 BC037207 NM_001135051 NM_020940	231	+	AK302800 TSC_hg19_v1_chr10_+_116697983 BC030601 NM_139169 AK312805 BX648709 BX648479 AF448144 AK223567 CU688934 DQ890887 DQ894043	116645	+	TSC_hg19_v1_chr10_+_116853123 BC029592 BC035157 NM_207303 BC139916 BC139923 BC047716	271830	+	AK057834|ABLIM1|3983|actin binding LIM protein 1##NM_001003407|ABLIM1|3983|actin binding LIM protein 1##NM_001003408|ABLIM1|3983|actin binding LIM protein 1##D31883|ABLIM1|3983|actin binding LIM protein 1##BC037207|FAM160B1|57700|family with sequence similarity 160, member B1##NM_001135051|FAM160B1|57700|family with sequence similarity 160, member B1##NM_020940|FAM160B1|57700|family with sequence similarity 160, member B1##AK302800|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC030601|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##NM_139169|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK312805|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648709|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BX648479|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AF448144|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##AK223567|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ890887|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##DQ894043|TRUB1|142940|TruB pseudouridine (psi) synthase homolog 1 (E. coli)##BC029592|ATRNL1|26033|attractin-like 1##BC035157|ATRNL1|26033|attractin-like 1##NM_207303|ATRNL1|26033|attractin-like 1##BC139916|ATRNL1|26033|attractin-like 1##BC139923|ATRNL1|26033|attractin-like 1##BC047716|ATRNL1|26033|attractin-like 1	0.604737	CTCF.p2:44:0.605
chr10	5336215	5336284	reg1029304.p1	3.983	+	AK314988 BC020744 NM_001818 TSC_hg19_v1_chr10_+_5238799 S68287 AB031085 AB045829 CU676682 DQ891424 DQ894598 M33375 D26125	-97454	+	BC019230 TSC_hg19_v1_chr10_+_5136613 S68288 AF149416 AM392923 BT007286 CU674730 CU676394 DQ890679 DQ893860 GQ129450 GQ129451	-199616	+	TSC_hg19_v1_chr10_+_5136605 AB018580 AK296701 AK290365 AK315411 AK310940	-199650	+	NM_053049 BC100867 BC100868 BC100869 BC100870	70765	+	TSC_hg19_v1_chr10_-_5446792 BC098247 BC099716 BC105634 AK296616 AK025318 NM_001171864 NM_024803	110539	-	TSC_hg19_v1_chr10_+_5454547 NM_001047160 AK299335 BC053553 S82401 AB587387 CU690984	118336	+	AK314988|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##BC020744|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##NM_001818|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##S68287|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##AB031085|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##AB045829|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##DQ891424|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##DQ894598|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##M33375|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##D26125|AKR1C4|1109|aldo-keto reductase family 1, member C4 (chlordecone reductase; 3-alpha hydroxysteroid dehydrogenase, type I; dihydrodiol dehydrogenase 4)##BC019230|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68288|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AF149416|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AM392923|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##BT007286|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##DQ890679|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##DQ893860|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##GQ129450|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##GQ129451|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AB018580|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK290365|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK315411|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##AK310940|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##NM_053049|UCN3|114131|urocortin 3 (stresscopin)##BC100867|UCN3|114131|urocortin 3 (stresscopin)##BC100868|UCN3|114131|urocortin 3 (stresscopin)##BC100869|UCN3|114131|urocortin 3 (stresscopin)##BC100870|UCN3|114131|urocortin 3 (stresscopin)##BC098247|TUBAL3|79861|tubulin, alpha-like 3##BC099716|TUBAL3|79861|tubulin, alpha-like 3##BC105634|TUBAL3|79861|tubulin, alpha-like 3##AK296616|TUBAL3|79861|tubulin, alpha-like 3##AK025318|TUBAL3|79861|tubulin, alpha-like 3##NM_001171864|TUBAL3|79861|tubulin, alpha-like 3##NM_024803|TUBAL3|79861|tubulin, alpha-like 3##NM_001047160|NET1|10276|neuroepithelial cell transforming 1##AK299335|NET1|10276|neuroepithelial cell transforming 1##BC053553|NET1|10276|neuroepithelial cell transforming 1##S82401|NET1|10276|neuroepithelial cell transforming 1	0.0	
chr1	17862816	17862913	reg1031029.p1	3.983	+	TSC_hg19_v1_chr1_+_17846826 AK129959	-16041	+	TSC_hg19_v1_chr1_-_17766260 NM_018715	-96593	-	TSC_hg19_v1_chr1_-_17766174 AB040903	-96689	-	TSC_hg19_v1_chr1_+_17866365 AB046846 NM_018125 AK311076	3496	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	44151	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	82001	+	AK129959|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_018715|RCC2|55920|regulator of chromosome condensation 2##AB040903|RCC2|55920|regulator of chromosome condensation 2##AB046846|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_018125|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK311076|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like	0.0	
chr18	2230846	2230958	reg1022914.p2	3.983	+	NM_001117 BC093837 BC101803 S83513	-1325561	+	AK313050 NM_001099733	-1325959	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-1418599	-	AK290001 BC111020 NM_022840	340553	-	NM_006101 BC005239 TSC_hg19_v1_chr18_+_2571579 AK289396 AK313184 BC035617 BC010171	340643	+	TSC_hg19_v1_chr18_+_2571589 AF017790	340693	+	NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4##NM_006101|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC005239|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK289396|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK313184|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC035617|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC010171|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AF017790|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)	0.830069	CTCF.p2:0:0.830
chr2	213114344	213114431	reg1028596.p1	3.983	+	AK316425 NM_001122634 AK302778 AY317138	-1656302	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-1692998	+	NM_001122633 AB208800	-1771969	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	288928	-	AK301503 AF130863 NM_016260	900668	-	BC028936 NM_001079526	901945	-	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	0.691623	CTCF.p2:-6:0.692
chr22	37523072	37523196	reg1029513.p1	3.983	+	CR456446 TSC_hg19_v1_chr22_-_37505748	-17456	-	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	-23559	-	TSC_hg19_v1_chr22_+_37447781 NM_024681 BC025403 BC031038 BC009961 AK022304	-75355	+	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	22818	-	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	61157	-	BC042068 NM_001051 AK291165	85249	-	CR456446|TMPRSS6|164656|transmembrane protease, serine 6##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##NM_024681|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC025403|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC031038|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC009961|KCTD17|79734|potassium channel tetramerisation domain containing 17##AK022304|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3	0.017961	
chr2	43354736	43354916	reg1001920.p2	3.983	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-335075	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-363526	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-558929	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	98519	-	TSC_hg19_v1_chr2_-_43453736 BC020369	98904	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	98916	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.0	
chr2	64945572	64945654	reg1032026.p2	3.983	+	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-64566	-	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-64764	-	TSC_hg19_v1_chr2_+_64751580 AL833962	-194011	+	TSC_hg19_v1_chr2_-_65090764 AK097952	145128	-	TSC_hg19_v1_chr2_-_65159574 BC037562	213964	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	269987	+	D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##AL833962|AFTPH|54812|aftiphilin##BC037562|LOC400958|400958|uncharacterized LOC400958##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.0	
chr7	142135213	142135340	reg1028922.p2	3.983	+	AY358487 BC035384 AK122940 NM_001001317	-177415	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-323737	+	AF016833 NM_004668 BC120872	-439584	+	NM_001190487	238854	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	322050	+	M12426 TSC_hg19_v1_chr7_+_142495248	359919	+	AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	0.999853	CTCF.p2:-22:1.000
chr8	142412871	142412987	reg1033235.p2	3.983	+	TSC_hg19_v1_chr8_+_142402120 AK311257	-10795	+	NM_005293	-35565	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	-148739	-	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	19132	+	BC144560 AK125848 AK131461 NM_207414	104388	-	BC065226 TSC_hg19_v1_chr8_-_143484544 AK055726 NM_145003	1071608	-	NM_005293|GPR20|2843|G protein-coupled receptor 20##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein##BC065226|TSNARE1|203062|t-SNARE domain containing 1##AK055726|TSNARE1|203062|t-SNARE domain containing 1##NM_145003|TSNARE1|203062|t-SNARE domain containing 1	0.0	
chrX	24187175	24187356	reg1032443.p1	3.983	+	X59739 X59740 TSC_hg19_v1_chrX_+_24167864	-19393	+	AB209892 NM_001178086 NM_001178095 X59738 TSC_hg19_v1_chrX_+_24167845 NM_001178084 NM_001178085 NM_003410	-19473	+	TSC_hg19_v1_chrX_+_24073072 AK222577 AK290397 AK312247 AB590041 CU676476 DQ891794 DQ894977 AB451230 AB451353 L19161	-114187	+	NM_001136233	144166	-	NM_001136234	193612	+	NM_001142386 NM_005391 AK301965 TSC_hg19_v1_chrX_+_24483405 BC015948 L42452 CU677533	296192	+	X59739|ZFX|7543|zinc finger protein, X-linked##X59740|ZFX|7543|zinc finger protein, X-linked##AB209892|ZFX|7543|zinc finger protein, X-linked##NM_001178086|ZFX|7543|zinc finger protein, X-linked##NM_001178095|ZFX|7543|zinc finger protein, X-linked##X59738|ZFX|7543|zinc finger protein, X-linked##NM_001178084|ZFX|7543|zinc finger protein, X-linked##NM_001178085|ZFX|7543|zinc finger protein, X-linked##NM_003410|ZFX|7543|zinc finger protein, X-linked##AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##NM_001136233|FAM48B2|170067|family with sequence similarity 48, member B2##NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1##NM_001142386|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_005391|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AK301965|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##BC015948|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##L42452|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3	0.0	
chr10	119209156	119209267	reg1035047.p1	3.982	+	CU688476 TSC_hg19_v1_chr10_-_119134939 BC012186 BC028375 NM_173791 AK091746 AX747159 BC033019	-74330	-	NM_003054 BC030593 TSC_hg19_v1_chr10_+_119000626 AK314997 L23205 L09118 X71354 L14269 BC108927 BC108928	-208561	+	AB087138 AB464053 NM_181840	-252212	+	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	92705	-	AF301598 NM_001165924 NM_004098	92744	+	TSC_hg19_v1_chr10_+_119302713 AB463605	93532	+	BC012186|PDZD8|118987|PDZ domain containing 8##BC028375|PDZD8|118987|PDZ domain containing 8##NM_173791|PDZD8|118987|PDZ domain containing 8##AK091746|PDZD8|118987|PDZ domain containing 8##BC033019|PDZD8|118987|PDZ domain containing 8##NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AB087138|KCNK18|338567|potassium channel, subfamily K, member 18##NM_181840|KCNK18|338567|potassium channel, subfamily K, member 18##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AF301598|EMX2|2018|empty spiracles homeobox 2##NM_001165924|EMX2|2018|empty spiracles homeobox 2##NM_004098|EMX2|2018|empty spiracles homeobox 2	0.0	
chr10	15018043	15018163	reg1028336.p1	3.982	+	NM_001080836	-16666	+	CU692508 TSC_hg19_v1_chr10_-_14996096 BC108276 AK022922 BC022254 AF395747 AF395748 AF395749 AF395750 AF395751 AF395752 AJ296101 BC009185 BX648858 AK021422 AK290598 AK307912 NM_001033855 NM_001033857 NM_001033858 NM_022487	-22049	-	NM_001193424 NM_001193426 BC029360 TSC_hg19_v1_chr10_+_14920864 NM_001193425 NM_001193427 AK222565 AK225369 AK027067 CU688630 BC007754 NM_024670	-97264	+	NM_001039702 NM_018324 BC050372 AK001844 AK001968	67824	+	BC029526 AK095538 AK295169 NM_001039844 TSC_hg19_v1_chr10_-_15130776	112671	-	NM_001097590 NM_006414 NM_183005 TSC_hg19_v1_chr10_+_15139195 AK223418	121089	+	NM_001080836|MEIG1|644890|meiosis expressed gene 1 homolog (mouse)##BC108276|DCLRE1C|64421|DNA cross-link repair 1C##AK022922|DCLRE1C|64421|DNA cross-link repair 1C##BC022254|DCLRE1C|64421|DNA cross-link repair 1C##AF395747|DCLRE1C|64421|DNA cross-link repair 1C##AF395748|DCLRE1C|64421|DNA cross-link repair 1C##AF395749|DCLRE1C|64421|DNA cross-link repair 1C##AF395750|DCLRE1C|64421|DNA cross-link repair 1C##AF395751|DCLRE1C|64421|DNA cross-link repair 1C##AF395752|DCLRE1C|64421|DNA cross-link repair 1C##AJ296101|DCLRE1C|64421|DNA cross-link repair 1C##BC009185|DCLRE1C|64421|DNA cross-link repair 1C##BX648858|DCLRE1C|64421|DNA cross-link repair 1C##AK021422|DCLRE1C|64421|DNA cross-link repair 1C##AK290598|DCLRE1C|64421|DNA cross-link repair 1C##AK307912|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033855|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033857|DCLRE1C|64421|DNA cross-link repair 1C##NM_001033858|DCLRE1C|64421|DNA cross-link repair 1C##NM_022487|DCLRE1C|64421|DNA cross-link repair 1C##NM_001193424|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193426|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##BC029360|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193425|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001193427|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK222565|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK225369|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##AK027067|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##BC007754|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_024670|SUV39H2|79723|suppressor of variegation 3-9 homolog 2 (Drosophila)##NM_001039702|OLAH|55301|oleoyl-ACP hydrolase##NM_018324|OLAH|55301|oleoyl-ACP hydrolase##BC050372|OLAH|55301|oleoyl-ACP hydrolase##AK001844|OLAH|55301|oleoyl-ACP hydrolase##AK001968|OLAH|55301|oleoyl-ACP hydrolase##BC029526|ACBD7|414149|acyl-CoA binding domain containing 7##AK095538|ACBD7|414149|acyl-CoA binding domain containing 7##AK295169|ACBD7|414149|acyl-CoA binding domain containing 7##NM_001039844|ACBD7|414149|acyl-CoA binding domain containing 7##NM_001097590|RPP38|10557|ribonuclease P/MRP 38kDa subunit##NM_006414|RPP38|10557|ribonuclease P/MRP 38kDa subunit##NM_183005|RPP38|10557|ribonuclease P/MRP 38kDa subunit##AK223418|RPP38|10557|ribonuclease P/MRP 38kDa subunit	0.238537	CTCF.p2:-6:0.228
chr10	98347026	98347092	reg1044015.p1	3.982	+	TSC_hg19_v1_chr10_-_98346798 AF269150 BC136788 BC136789 BC144412 NM_020123	-236	-	TSC_hg19_v1_chr10_-_98346770 AK314348	-281	-	TSC_hg19_v1_chr10_-_98346739 AF160213	-387	-	BX648550 TSC_hg19_v1_chr10_-_98480272 AK125635 NM_152309	133182	-	TSC_hg19_v1_chr10_+_98592020 NM_001170765 NM_001170766 AL832106 AK308356 BC053359	244994	+	TSC_hg19_v1_chr10_-_98592186 AB593180	245141	-	AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3##BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3##AK314348|TM9SF3|56889|transmembrane 9 superfamily member 3##AF160213|TM9SF3|56889|transmembrane 9 superfamily member 3##BX648550|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AK125635|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_152309|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor##AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor##BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor	0.0	
chr1	236509144	236509245	reg1034555.p1	3.982	+	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	-63878	-	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	-64006	-	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	-203318	+	AK290862 AY028913 NM_145861 BC106873 BC106874 BC114557 BC114560 BC128082	48489	+	AK096339 NM_080738 AY028914 AK291930 BC006533 AY071862	49628	+	NM_201545 AK098613	172347	+	AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##AK290862|EDARADD|128178|EDAR-associated death domain##AY028913|EDARADD|128178|EDAR-associated death domain##NM_145861|EDARADD|128178|EDAR-associated death domain##BC114557|EDARADD|128178|EDAR-associated death domain##BC114560|EDARADD|128178|EDAR-associated death domain##BC128082|EDARADD|128178|EDAR-associated death domain##AK096339|EDARADD|128178|EDAR-associated death domain##NM_080738|EDARADD|128178|EDAR-associated death domain##AY028914|EDARADD|128178|EDAR-associated death domain##AK291930|EDARADD|128178|EDAR-associated death domain##BC006533|EDARADD|128178|EDAR-associated death domain##AY071862|EDARADD|128178|EDAR-associated death domain##NM_201545|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AK098613|LGALS8|3964|lectin, galactoside-binding, soluble, 8	0.739845	CTCF.p2:19:0.740
chr1	244374594	244374680	reg1033807.p1	3.982	+	TSC_hg19_v1_chr1_+_244217286 AK310634	-157342	+	BC078175 AJ001388 NM_006352	-158094	+	TSC_hg19_v1_chr1_+_244214584 AK291408 AK293892 BC036677	-160054	+	BC054479 NM_001012970	141299	+	CU680302 EU831433 EU831525 TSC_hg19_v1_chr1_-_244615212 AK025514 AK303886 BC012356	240539	-	TSC_hg19_v1_chr1_-_244615392 AK308749 NM_001126	240701	-	BC078175|ZNF238|10472|zinc finger protein 238##AJ001388|ZNF238|10472|zinc finger protein 238##NM_006352|ZNF238|10472|zinc finger protein 238##AK291408|ZNF238|10472|zinc finger protein 238##AK293892|ZNF238|10472|zinc finger protein 238##BC036677|ZNF238|10472|zinc finger protein 238##BC054479|C1orf100|200159|chromosome 1 open reading frame 100##NM_001012970|C1orf100|200159|chromosome 1 open reading frame 100##EU831433|ADSS|159|adenylosuccinate synthase##EU831525|ADSS|159|adenylosuccinate synthase##AK025514|ADSS|159|adenylosuccinate synthase##AK303886|ADSS|159|adenylosuccinate synthase##BC012356|ADSS|159|adenylosuccinate synthase##AK308749|ADSS|159|adenylosuccinate synthase##NM_001126|ADSS|159|adenylosuccinate synthase	0.014427	
chr13	45968255	45968342	reg1036739.p1	3.982	+	AF318337 TSC_hg19_v1_chr13_+_45915726 AK124332	-52685	+	TSC_hg19_v1_chr13_-_45915319 AK130847 AK296587 AK296952 AK312951 AY117678 D28408 BC022436	-52934	-	BC012431 TSC_hg19_v1_chr13_-_45915280 X64899 BC040008 NM_003295 X16064 AF072098 BC007842 BC003352 BC052333	-53006	-	TSC_hg19_v1_chr13_-_45992456 BC129808	24162	-	TSC_hg19_v1_chr13_-_45992486 BC132739 BC136760 BC144401 AK094133 AK095465 AK302967 NM_001010875	24196	-	TSC_hg19_v1_chr13_+_46039081 NM_031431 AF349676 AF332595 AK026305 AK225466 AK225952 BX648211 AK294959 AK304248 AK314387 BC038953 CU691622	70799	+	AF318337|LOC100190939|100190939|uncharacterized LOC100190939##AK124332|LOC100190939|100190939|uncharacterized LOC100190939##AK130847|TPT1|7178|tumor protein, translationally-controlled 1##AK296587|TPT1|7178|tumor protein, translationally-controlled 1##AK296952|TPT1|7178|tumor protein, translationally-controlled 1##AK312951|TPT1|7178|tumor protein, translationally-controlled 1##AY117678|TPT1|7178|tumor protein, translationally-controlled 1##BC022436|TPT1|7178|tumor protein, translationally-controlled 1##BC012431|TPT1|7178|tumor protein, translationally-controlled 1##X64899|TPT1|7178|tumor protein, translationally-controlled 1##BC040008|TPT1|7178|tumor protein, translationally-controlled 1##NM_003295|TPT1|7178|tumor protein, translationally-controlled 1##X16064|TPT1|7178|tumor protein, translationally-controlled 1##BC007842|TPT1|7178|tumor protein, translationally-controlled 1##BC003352|TPT1|7178|tumor protein, translationally-controlled 1##BC052333|TPT1|7178|tumor protein, translationally-controlled 1##BC129808|SLC25A30|253512|solute carrier family 25, member 30##BC132739|SLC25A30|253512|solute carrier family 25, member 30##BC136760|SLC25A30|253512|solute carrier family 25, member 30##BC144401|SLC25A30|253512|solute carrier family 25, member 30##AK094133|SLC25A30|253512|solute carrier family 25, member 30##AK095465|SLC25A30|253512|solute carrier family 25, member 30##AK302967|SLC25A30|253512|solute carrier family 25, member 30##NM_001010875|SLC25A30|253512|solute carrier family 25, member 30##NM_031431|COG3|83548|component of oligomeric golgi complex 3##AF349676|COG3|83548|component of oligomeric golgi complex 3##AF332595|COG3|83548|component of oligomeric golgi complex 3##AK026305|COG3|83548|component of oligomeric golgi complex 3##AK225466|COG3|83548|component of oligomeric golgi complex 3##AK225952|COG3|83548|component of oligomeric golgi complex 3##BX648211|COG3|83548|component of oligomeric golgi complex 3##AK294959|COG3|83548|component of oligomeric golgi complex 3##AK304248|COG3|83548|component of oligomeric golgi complex 3##AK314387|COG3|83548|component of oligomeric golgi complex 3##BC038953|COG3|83548|component of oligomeric golgi complex 3	0.130656	
chr16	11254581	11254761	reg1033705.p2	3.982	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-216228	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-218436	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-218505	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	95379	-	X63758 BC096135 BC096136 BC096137 NM_005425	108467	-	NM_021247	112780	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr19	10529633	10529702	reg1027560.p2	3.982	+	AY593872 NM_001243121 TSC_hg19_v1_chr19_+_10527555	-2164	+	TSC_hg19_v1_chr19_-_10514250 NM_007065	-15411	-	TSC_hg19_v1_chr19_-_10514219 BC000083 BC008793 U63131	-15454	-	TSC_hg19_v1_chr19_+_10531189 L20965 NM_001111307	1563	+	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	11760	+	AF073745 NM_001111309	13443	+	AY593872|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001243121|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_007065|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC000083|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC008793|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U63131|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##L20965|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111307|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AF073745|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111309|PDE4A|5141|phosphodiesterase 4A, cAMP-specific	0.202155	CTCF.p2:22:0.202
chr19	30458021	30458128	reg1019152.p2	3.982	+	TSC_hg19_v1_chr19_+_30433145 NM_003796 AK226173 AF091095 AK292170 BC067259 AK314313 AK001437 NM_134447 AB385084	-24792	+	BC026184 NM_001252641	-43524	+	TSC_hg19_v1_chr19_+_30302897 AK291549 NM_001238 BC035498	-155173	+	BC150171 AB002388 BC146757 NM_014717 BC132720 BC132722	405306	+	TSC_hg19_v1_chr19_-_31840331 AB040907 AM393571 AK291466 BX648745 NM_020856	1382273	-	FJ211597 NM_001205273	1625112	+	NM_003796|URI1|8725|URI1, prefoldin-like chaperone##AK226173|URI1|8725|URI1, prefoldin-like chaperone##AF091095|URI1|8725|URI1, prefoldin-like chaperone##AK292170|URI1|8725|URI1, prefoldin-like chaperone##BC067259|URI1|8725|URI1, prefoldin-like chaperone##AK314313|URI1|8725|URI1, prefoldin-like chaperone##AK001437|URI1|8725|URI1, prefoldin-like chaperone##NM_134447|URI1|8725|URI1, prefoldin-like chaperone##BC026184|URI1|8725|URI1, prefoldin-like chaperone##NM_001252641|URI1|8725|URI1, prefoldin-like chaperone##AK291549|CCNE1|898|cyclin E1##NM_001238|CCNE1|898|cyclin E1##BC035498|CCNE1|898|cyclin E1##BC150171|ZNF536|9745|zinc finger protein 536##AB002388|ZNF536|9745|zinc finger protein 536##BC146757|ZNF536|9745|zinc finger protein 536##NM_014717|ZNF536|9745|zinc finger protein 536##BC132720|ZNF536|9745|zinc finger protein 536##BC132722|ZNF536|9745|zinc finger protein 536##AB040907|TSHZ3|57616|teashirt zinc finger homeobox 3##AM393571|TSHZ3|57616|teashirt zinc finger homeobox 3##AK291466|TSHZ3|57616|teashirt zinc finger homeobox 3##BX648745|TSHZ3|57616|teashirt zinc finger homeobox 3##NM_020856|TSHZ3|57616|teashirt zinc finger homeobox 3##FJ211597|THEG5|100507527|testis highly expressed protein 5##NM_001205273|THEG5|100507527|testis highly expressed protein 5	0.0	
chr20	45903465	45903571	reg1028749.p2	3.982	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	-379966	+	TSC_hg19_v1_chr20_+_45523505 BC008803	-380010	+	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	-380236	+	TSC_hg19_v1_chr20_-_45927496 BC030721	24051	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	73129	-	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	81970	-	AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8	0.053487	
chr2	197075982	197076150	reg1030945.p1	3.982	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-39748	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-39787	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-142571	-	BC117194 BC117198 AB037722 NM_020760	381226	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	428291	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	588347	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.0	
chr2	4101799	4101897	reg1033038.p1	3.982	+	AK302299 NM_018436 BC029652	-396051	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-459279	+	X74803 TSC_hg19_v1_chr2_+_3627765	-474103	+	U23752 AB028641 NM_003108 BC025789 AB464713	1730967	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	2904052	-	TSC_hg19_v1_chr2_-_7006650 AK308509	2904855	-	AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##X74803|RPS7|6201|ribosomal protein S7##U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	0.998654	CTCF.p2:17:0.999
chr3	171011320	171011417	reg1032688.p2	3.982	+	NM_000340	-266601	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-266835	-	AB528020 J03810 TSC_hg19_v1_chr3_-_170744510 AK313622 BC060041 AK290846 AK292741	-266878	-	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	166703	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	516887	-	NM_001164436 AK026825	549780	+	NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##J03810|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK313622|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##BC060041|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK290846|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK292741|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212	0.0	
chr9	91209033	91209145	reg1002340.p2	3.982	+	NM_001161625 NM_145283 BC022521	-59072	+	TSC_hg19_v1_chr9_+_91003988 AK315854	-205091	+	TSC_hg19_v1_chr9_+_91003366 NM_006717 BC013571 AL136719 AK092017 AX747313 AF087864 AF106682 AK290009	-205756	+	BC101432 BC101439 BC101440 BC101442 AK098532 NM_001100111	57950	-	AK094842 NM_001001938 NM_001142413 AK127854 BC144432 BC136895 AY333281	396754	+	TSC_hg19_v1_chr9_+_91606382 AK312798 BC060827 NM_005226	397281	+	NM_001161625|NXNL2|158046|nucleoredoxin-like 2##NM_145283|NXNL2|158046|nucleoredoxin-like 2##BC022521|NXNL2|158046|nucleoredoxin-like 2##AK315854|SPIN1|10927|spindlin 1##NM_006717|SPIN1|10927|spindlin 1##BC013571|SPIN1|10927|spindlin 1##AL136719|SPIN1|10927|spindlin 1##AK092017|SPIN1|10927|spindlin 1##AF087864|SPIN1|10927|spindlin 1##AF106682|SPIN1|10927|spindlin 1##AK290009|SPIN1|10927|spindlin 1##BC101432|LOC286238|286238|uncharacterized LOC286238##BC101439|LOC286238|286238|uncharacterized LOC286238##BC101440|LOC286238|286238|uncharacterized LOC286238##BC101442|LOC286238|286238|uncharacterized LOC286238##AK098532|LOC286238|286238|uncharacterized LOC286238##NM_001100111|LOC286238|286238|uncharacterized LOC286238##AK094842|C9orf47|286223|chromosome 9 open reading frame 47##NM_001001938|C9orf47|286223|chromosome 9 open reading frame 47##NM_001142413|C9orf47|286223|chromosome 9 open reading frame 47##AK127854|C9orf47|286223|chromosome 9 open reading frame 47##BC144432|C9orf47|286223|chromosome 9 open reading frame 47##BC136895|C9orf47|286223|chromosome 9 open reading frame 47##AY333281|C9orf47|286223|chromosome 9 open reading frame 47##AK312798|S1PR3|1903|sphingosine-1-phosphate receptor 3##BC060827|S1PR3|1903|sphingosine-1-phosphate receptor 3##NM_005226|S1PR3|1903|sphingosine-1-phosphate receptor 3	0.0	
chr10	103761297	103761380	reg1040498.p1	3.981	+	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	-157731	-	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	-161726	-	TSC_hg19_v1_chr10_-_103578213 NM_001142434 NM_012215	-183120	-	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	54574	-	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	63804	+	AK300588 TSC_hg19_v1_chr10_-_103874641	113281	-	BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##NM_001142434|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##NM_012215|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6##AK300588|LDB1|8861|LIM domain binding 1	0.0	
chr11	68924847	68924984	reg1030618.p1	3.981	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-67389	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-108489	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-108565	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	136707	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	530941	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	530995	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.560218	CTCF.p2:-3:0.560
chr13	100020442	100020572	reg1032219.p1	3.981	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-60809	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-109893	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-167388	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	133193	+	TSC_hg19_v1_chr13_+_100153777 BC130293	133275	+	BC041830 TSC_hg19_v1_chr13_+_100229390	208870	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.0	
chr15	67373409	67373551	reg1019111.p1	3.981	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	-15079	+	TSC_hg19_v1_chr15_+_67358179 AK290881	-15305	+	NM_001142861 U59914	-372551	+	NM_001145102 AK316017	44643	+	AK298139 NM_001145103	56878	+	NM_001145104 AK300614 AK301348	85016	+	NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##AK290881|SMAD3|4088|SMAD family member 3##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3##AK298139|SMAD3|4088|SMAD family member 3##NM_001145103|SMAD3|4088|SMAD family member 3##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3	0.0	
chr16	85229325	85229399	reg1045352.p1	3.981	+	BC093665 BC111944 AK126284 NM_198491	-83308	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-167992	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-184233	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	415659	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	417591	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	493180	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.0	
chr19	13278683	13278788	reg1029780.p2	3.981	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-14555	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-17443	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-17596	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	338441	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	563844	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	579984	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.0	
chr2	111996861	111996964	reg1033505.p1	3.981	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-118425	+	AK300513 NM_001142807 BC022268	-506733	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-561090	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	644714	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	644849	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	659273	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.0	
chr3	108737847	108737952	reg1036118.p1	3.981	+	AF110003 EU832759 GQ129299 AF110002 BC103993 BC103994 AB593147 NM_005459	-65288	-	AK291991 AJ240085 AF161547 NM_016388 BC025713 AJ224878	-196305	+	HQ258043 AM050721 BC113502 BC113528 BC069318 AF290873 AF323084 AY358655 NM_032579 TSC_hg19_v1_chr3_-_108476258	-261754	-	CU690636 BC050307 AK302642 AF084946 BC028680 NM_014429	99051	-	AK026416 TSC_hg19_v1_chr3_+_108855566	117664	+	BC018070 AY283672 NM_138815	297402	-	AF110003|GUCA1C|9626|guanylate cyclase activator 1C##EU832759|GUCA1C|9626|guanylate cyclase activator 1C##GQ129299|GUCA1C|9626|guanylate cyclase activator 1C##AF110002|GUCA1C|9626|guanylate cyclase activator 1C##BC103993|GUCA1C|9626|guanylate cyclase activator 1C##BC103994|GUCA1C|9626|guanylate cyclase activator 1C##AB593147|GUCA1C|9626|guanylate cyclase activator 1C##NM_005459|GUCA1C|9626|guanylate cyclase activator 1C##AK291991|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ240085|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AF161547|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##NM_016388|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##BC025713|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ224878|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##HQ258043|RETNLB|84666|resistin like beta##AM050721|RETNLB|84666|resistin like beta##BC113502|RETNLB|84666|resistin like beta##BC113528|RETNLB|84666|resistin like beta##BC069318|RETNLB|84666|resistin like beta##AF290873|RETNLB|84666|resistin like beta##AF323084|RETNLB|84666|resistin like beta##AY358655|RETNLB|84666|resistin like beta##NM_032579|RETNLB|84666|resistin like beta##BC050307|MORC1|27136|MORC family CW-type zinc finger 1##AK302642|MORC1|27136|MORC family CW-type zinc finger 1##AF084946|MORC1|27136|MORC family CW-type zinc finger 1##BC028680|MORC1|27136|MORC family CW-type zinc finger 1##NM_014429|MORC1|27136|MORC family CW-type zinc finger 1##AK026416|FLJ22763|401081|uncharacterized LOC401081##BC018070|DPPA2|151871|developmental pluripotency associated 2##AY283672|DPPA2|151871|developmental pluripotency associated 2##NM_138815|DPPA2|151871|developmental pluripotency associated 2	0.060121	
chr4	111265477	111265586	reg1035755.p1	3.981	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	-145746	-	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-431484	+	AK126648 NM_198506	-493046	+	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	131842	+	AK313987 TSC_hg19_v1_chr4_-_111543909	278379	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	278744	-	BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK126648|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_198506|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313987|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2	0.037705	
chr5	86264432	86264528	reg1032469.p2	3.981	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	-350663	+	TSC_hg19_v1_chr5_+_85913757 AK026505	-350722	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-2583816	-	TSC_hg19_v1_chr5_+_86563706 CR749722	299205	+	TSC_hg19_v1_chr5_+_86563831 BC131816	299346	+	TSC_hg19_v1_chr5_+_86564085 AB209106 NM_002890 BC033015	299586	+	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.061952	
chr6	24910617	24910734	reg1037292.p1	3.981	+	U49187 AK300138 BC001232 NM_015864	-33158	-	NM_001251991	-135035	+	TSC_hg19_v1_chr6_+_24775164 AK021685 NM_001251989 NM_001251990 NM_015895 AK315743 BC005389 BC005185	-135481	+	AB002384 NM_014722	519	-	TSC_hg19_v1_chr6_-_24936189 AK299047	25508	-	TSC_hg19_v1_chr6_+_25279316 BC040903	368643	+	U49187|FAM65B|9750|family with sequence similarity 65, member B##AK300138|FAM65B|9750|family with sequence similarity 65, member B##BC001232|FAM65B|9750|family with sequence similarity 65, member B##NM_015864|FAM65B|9750|family with sequence similarity 65, member B##NM_001251991|GMNN|51053|geminin, DNA replication inhibitor##AK021685|GMNN|51053|geminin, DNA replication inhibitor##NM_001251989|GMNN|51053|geminin, DNA replication inhibitor##NM_001251990|GMNN|51053|geminin, DNA replication inhibitor##NM_015895|GMNN|51053|geminin, DNA replication inhibitor##AK315743|GMNN|51053|geminin, DNA replication inhibitor##BC005389|GMNN|51053|geminin, DNA replication inhibitor##BC005185|GMNN|51053|geminin, DNA replication inhibitor##AB002384|FAM65B|9750|family with sequence similarity 65, member B##NM_014722|FAM65B|9750|family with sequence similarity 65, member B##AK299047|FAM65B|9750|family with sequence similarity 65, member B##BC040903|LRRC16A|55604|leucine rich repeat containing 16A	0.070975	
chr6	82463047	82463202	reg1011737.p3	3.981	+	TSC_hg19_v1_chr6_-_82462399 AJ420592 BC000683 AK000044 BX648876 AF350451 BC007351 AK056057 AK292109 NM_017633	-713	-	AY740520 FJ211061 CU674334 CU675631 TSC_hg19_v1_chr6_-_82461975	-1203	-	TSC_hg19_v1_chr6_+_80816397 AK289977 BC040139 M55575 AB529112 BT020063 X52446	-1646687	+	BC112929 TSC_hg19_v1_chr6_-_82957431 BC012551	494289	-	TSC_hg19_v1_chr6_-_82957441 NM_015525 DQ005633 DQ005634	494344	-	AK291170 NM_006670	609798	+	AJ420592|FAM46A|55603|family with sequence similarity 46, member A##BC000683|FAM46A|55603|family with sequence similarity 46, member A##AK000044|FAM46A|55603|family with sequence similarity 46, member A##BX648876|FAM46A|55603|family with sequence similarity 46, member A##AF350451|FAM46A|55603|family with sequence similarity 46, member A##BC007351|FAM46A|55603|family with sequence similarity 46, member A##AK056057|FAM46A|55603|family with sequence similarity 46, member A##AK292109|FAM46A|55603|family with sequence similarity 46, member A##NM_017633|FAM46A|55603|family with sequence similarity 46, member A##AY740520|FAM46A|55603|family with sequence similarity 46, member A##AK289977|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC040139|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##M55575|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BT020063|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##X52446|BCKDHB|594|branched chain keto acid dehydrogenase E1, beta polypeptide##BC112929|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##BC012551|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##NM_015525|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005633|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##DQ005634|IBTK|25998|inhibitor of Bruton agammaglobulinemia tyrosine kinase##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein	0.0	
chr8	121097104	121097284	reg1002814.p2	3.981	+	NM_022783 TSC_hg19_v1_chr8_+_120885965 AK315175 AK225168 AK297822 AL136678 AK225675 BC024746 AK022490 BC012040 AM392576 AM393333 AB527130 AK023916	-211190	+	DQ891267 DQ894455 TSC_hg19_v1_chr8_-_120868155 AK315356 AK074355 BC001531 AY358866 AK054585 BC001316 NM_024094	-229080	-	BC035673 AF026445 BC047732 TSC_hg19_v1_chr8_-_120845082 BC064830 NM_003184 AK316592	-252117	-	TSC_hg19_v1_chr8_+_121137341 NM_021110 Y11709 AK293080 AK307716 AK311498	40161	+	CU692406 DQ893117 DQ893487 DQ896395 AK307322 TSC_hg19_v1_chr8_-_121457370 AB049640 AF112214 BC009190	360161	-	TSC_hg19_v1_chr8_-_121457391 AK311924	360199	-	NM_022783|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK315175|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225168|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK297822|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AL136678|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK225675|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC024746|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK022490|DEPTOR|64798|DEP domain containing MTOR-interacting protein##BC012040|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM392576|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AM393333|DEPTOR|64798|DEP domain containing MTOR-interacting protein##AK023916|DEPTOR|64798|DEP domain containing MTOR-interacting protein##DQ891267|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##DQ894455|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK315356|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK074355|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001531|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AY358866|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##AK054585|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC001316|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##NM_024094|DSCC1|79075|defective in sister chromatid cohesion 1 homolog (S. cerevisiae)##BC035673|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AF026445|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC047732|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##BC064830|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_003184|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##AK316592|TAF2|6873|TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa##NM_021110|COL14A1|7373|collagen, type XIV, alpha 1##Y11709|COL14A1|7373|collagen, type XIV, alpha 1##AK293080|COL14A1|7373|collagen, type XIV, alpha 1##AK307716|COL14A1|7373|collagen, type XIV, alpha 1##AK311498|COL14A1|7373|collagen, type XIV, alpha 1##DQ893117|MRPL13|28998|mitochondrial ribosomal protein L13##DQ893487|MRPL13|28998|mitochondrial ribosomal protein L13##DQ896395|MRPL13|28998|mitochondrial ribosomal protein L13##AK307322|MRPL13|28998|mitochondrial ribosomal protein L13##AB049640|MRPL13|28998|mitochondrial ribosomal protein L13##AF112214|MRPL13|28998|mitochondrial ribosomal protein L13##BC009190|MRPL13|28998|mitochondrial ribosomal protein L13##AK311924|MRPL13|28998|mitochondrial ribosomal protein L13	0.0	
chr10	126406896	126407076	reg1030369.p2	3.980	+	BC113629 BC113631 NM_001167880 NM_022126 TSC_hg19_v1_chr10_+_126150391 BC110344 BC073172 AK055532 BC007324 HQ258160	-256565	+	NM_001146340 TSC_hg19_v1_chr10_-_126138606	-268409	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	-299468	-	D50930 TSC_hg19_v1_chr10_-_126432660	25658	-	TSC_hg19_v1_chr10_-_126432823 BC031654	25830	-	TSC_hg19_v1_chr10_-_126432908 NM_014661	25925	-	BC113629|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC113631|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001167880|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_022126|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC110344|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC073172|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##AK055532|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##BC007324|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##HQ258160|LHPP|64077|phospholysine phosphohistidine inorganic pyrophosphate phosphatase##NM_001146340|NKX1-2|390010|NK1 homeobox 2##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##D50930|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##NM_014661|FAM53B|9679|family with sequence similarity 53, member B	0.0	
chr1	101665002	101665183	reg1031802.p2	3.980	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-173659	+	BC003660 TSC_hg19_v1_chr1_-_101491341 AK125485 BC053857 AF132964 AF157319 AF248965 AK298181 AK225469 AK225707 AK225951 AK289351 NM_001077394 NM_001077395 NM_015958 AF161492	-173753	-	TSC_hg19_v1_chr1_+_101361700 AF233345 AB463270 AF529197 AM392927 AY094606	-303339	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	37289	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	37478	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	797395	-	AK125485|DPH5|51611|DPH5 homolog (S. cerevisiae)##BC053857|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF132964|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF157319|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF248965|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK298181|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225469|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225707|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK225951|DPH5|51611|DPH5 homolog (S. cerevisiae)##AK289351|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_001077394|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_001077395|DPH5|51611|DPH5 homolog (S. cerevisiae)##NM_015958|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF161492|DPH5|51611|DPH5 homolog (S. cerevisiae)##AF233345|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AF529197|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AM392927|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##AY094606|SLC30A7|148867|solute carrier family 30 (zinc transporter), member 7##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3	0.0	
chr1	32828837	32828909	reg1032396.p2	3.980	+	NM_001167676	-1030	-	BC035354 NM_052841	-1044	+	TSC_hg19_v1_chr1_-_32801835 AB528178 CU688192 AM393505 DQ893237 DQ896567 X70326 AL713653 AY007131 BC007904 BC066915 NM_023009	-27142	-	CR457252 TSC_hg19_v1_chr1_-_32860030 BC010573 CR749228 BX641056 AK300231 BC026322 AK297604 AK300306 AK001138 AK225717 AK293454 BC028381 AK021440 AK297352 AK225026 AK304477 AK316172 NM_001143888 NM_001143889 NM_001143890 NM_018045	31164	-	TSC_hg19_v1_chr1_+_32930659 AK092326 AX747483 NM_001145720	101779	+	NM_001040441	175898	+	NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##AM393505|MARCKSL1|65108|MARCKS-like 1##DQ893237|MARCKSL1|65108|MARCKS-like 1##DQ896567|MARCKSL1|65108|MARCKS-like 1##X70326|MARCKSL1|65108|MARCKS-like 1##AL713653|MARCKSL1|65108|MARCKS-like 1##AY007131|MARCKSL1|65108|MARCKS-like 1##BC007904|MARCKSL1|65108|MARCKS-like 1##BC066915|MARCKSL1|65108|MARCKS-like 1##NM_023009|MARCKSL1|65108|MARCKS-like 1##CR457252|BSDC1|55108|BSD domain containing 1##BC010573|BSDC1|55108|BSD domain containing 1##CR749228|BSDC1|55108|BSD domain containing 1##BX641056|BSDC1|55108|BSD domain containing 1##AK300231|BSDC1|55108|BSD domain containing 1##BC026322|BSDC1|55108|BSD domain containing 1##AK297604|BSDC1|55108|BSD domain containing 1##AK300306|BSDC1|55108|BSD domain containing 1##AK001138|BSDC1|55108|BSD domain containing 1##AK225717|BSDC1|55108|BSD domain containing 1##AK293454|BSDC1|55108|BSD domain containing 1##BC028381|BSDC1|55108|BSD domain containing 1##AK021440|BSDC1|55108|BSD domain containing 1##AK297352|BSDC1|55108|BSD domain containing 1##AK225026|BSDC1|55108|BSD domain containing 1##AK304477|BSDC1|55108|BSD domain containing 1##AK316172|BSDC1|55108|BSD domain containing 1##NM_001143888|BSDC1|55108|BSD domain containing 1##NM_001143889|BSDC1|55108|BSD domain containing 1##NM_001143890|BSDC1|55108|BSD domain containing 1##NM_018045|BSDC1|55108|BSD domain containing 1##NM_001145720|ZBTB8B|728116|zinc finger and BTB domain containing 8B##NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A	0.024007	
chr15	52394317	52394423	reg1032794.p1	3.980	+	TSC_hg19_v1_chr15_+_52311442 BC035492	-82909	+	TSC_hg19_v1_chr15_+_52311432 CR749401	-82936	+	TSC_hg19_v1_chr15_+_52311425 NM_002748	-82951	+	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	10576	-	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	77771	-	TSC_hg19_v1_chr15_+_52472257 AF007131	77965	+	BC035492|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##NM_002748|MAPK6|5597|mitogen-activated protein kinase 6##AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973	0.0	
chr17	80174587	80174761	reg1034872.p2	3.980	+	TSC_hg19_v1_chr17_-_80170705 BC040264 BC110997 NM_198082	-3939	-	TSC_hg19_v1_chr17_-_80056105 BC063242 NM_004104	-118570	-	TSC_hg19_v1_chr17_-_80056081 AB209988 U29344	-118607	-	NM_001042422 NM_001206950 TSC_hg19_v1_chr17_+_80186285	11675	+	NM_004207 TSC_hg19_v1_chr17_+_80186920 AK127090 AK223040 U81800	12242	+	NM_001042423	15433	+	BC040264|CCDC57|284001|coiled-coil domain containing 57##BC110997|CCDC57|284001|coiled-coil domain containing 57##NM_198082|CCDC57|284001|coiled-coil domain containing 57##BC063242|FASN|2194|fatty acid synthase##NM_004104|FASN|2194|fatty acid synthase##AB209988|FASN|2194|fatty acid synthase##U29344|FASN|2194|fatty acid synthase##NM_001042422|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_001206950|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_004207|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##AK223040|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##U81800|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)##NM_001042423|SLC16A3|9123|solute carrier family 16, member 3 (monocarboxylic acid transporter 4)	0.0	
chr20	49434853	49434957	reg1008116.p1	3.980	+	AF361220 NM_001010974 NM_017843 NM_198799 TSC_hg19_v1_chr20_+_49411542 AK000502 BC038381 BC047337 AJ511266 BC056883	-23387	+	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	-86836	+	TSC_hg19_v1_chr20_-_49308074 AK124347	-126828	-	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	112818	-	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	140158	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	140463	+	AF361220|BCAS4|55653|breast carcinoma amplified sequence 4##NM_001010974|BCAS4|55653|breast carcinoma amplified sequence 4##NM_017843|BCAS4|55653|breast carcinoma amplified sequence 4##NM_198799|BCAS4|55653|breast carcinoma amplified sequence 4##AK000502|BCAS4|55653|breast carcinoma amplified sequence 4##BC038381|BCAS4|55653|breast carcinoma amplified sequence 4##BC047337|BCAS4|55653|breast carcinoma amplified sequence 4##AJ511266|BCAS4|55653|breast carcinoma amplified sequence 4##BC056883|BCAS4|55653|breast carcinoma amplified sequence 4##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3	0.0	
chr2	123079391	123079458	reg1035649.p2	3.980	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-566187	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-584959	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-671779	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	1703440	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	4334283	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	4334368	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.0	
chr2	61034545	61034725	reg1033803.p2	3.980	+	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	-51151	+	AF080216 TSC_hg19_v1_chr2_-_60780784	-253857	-	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	-254113	-	TSC_hg19_v1_chr2_+_61108702 AK303926	74070	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	74102	+	TSC_hg19_v1_chr2_+_61108776 BC143885 BC117191 X75042	74152	+	NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC143885|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC117191|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##X75042|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)	0.02718	
chr14	69865827	69865896	reg1031009.p2	3.979	+	TSC_hg19_v1_chr14_+_69865419 BC047682	-425	+	TSC_hg19_v1_chr14_+_69865408 NM_001252148 NM_001252150 NM_018375 AK222547 AK002136 AK311104	-466	+	NM_001252151 NM_001252152 AK293222 AK316381 TSC_hg19_v1_chr14_+_69865137	-743	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	85619	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	212449	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	212530	+	BC047682|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252148|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252150|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_018375|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK222547|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK002136|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252151|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##NM_001252152|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK293222|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK316381|SLC39A9|55334|solute carrier family 39 (zinc transporter), member 9##AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##D87434|KIAA0247|9766|KIAA0247	0.0	
chr14	93526366	93526476	reg1039441.p1	3.979	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-136824	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	-136977	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-265735	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	55170	-	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	55793	-	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	124779	-	AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1	0.232178	
chr18	11831762	11831829	reg1043912.p1	3.979	+	L10665 TSC_hg19_v1_chr18_+_11752245	-79580	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	-80280	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	-142583	+	NM_020412 TSC_hg19_v1_chr18_+_11851412 AK314068 BC065933 BC012733 AF281064 CU680382	19654	+	BC002877 TSC_hg19_v1_chr18_-_11908317 AK054639 AX775859 DQ786245 BC073994 AK309948 AF289560	76511	-	AX775853 AX775855 AL833636 TSC_hg19_v1_chr18_-_11908364	76561	-	L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_020412|CHMP1B|57132|charged multivesicular body protein 1B##AK314068|CHMP1B|57132|charged multivesicular body protein 1B##BC065933|CHMP1B|57132|charged multivesicular body protein 1B##BC012733|CHMP1B|57132|charged multivesicular body protein 1B##AF281064|CHMP1B|57132|charged multivesicular body protein 1B##BC002877|MPPE1|65258|metallophosphoesterase 1##AK054639|MPPE1|65258|metallophosphoesterase 1##DQ786245|MPPE1|65258|metallophosphoesterase 1##BC073994|MPPE1|65258|metallophosphoesterase 1##AK309948|MPPE1|65258|metallophosphoesterase 1##AF289560|MPPE1|65258|metallophosphoesterase 1##AL833636|MPPE1|65258|metallophosphoesterase 1	0.038837	
chr18	59559977	59560087	reg1035278.p1	3.979	+	AF217289 BC101047 BC101048 BC101049 NM_031891	-402258	+	AK314130 NM_005912	-1520032	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-1992803	+	AK096495 NM_173557	271	-	AF109219 TSC_hg19_v1_chr18_-_59854208	294162	-	TSC_hg19_v1_chr18_-_59854227 BC028363	294189	-	AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##BC028363|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.037046	
chr2	69664636	69664722	reg1037488.p2	3.979	+	TSC_hg19_v1_chr2_-_69664606 AY286306 AY286307 BX538347	-65	-	AJ132584 AF132967 AB528729 HQ258750 TSC_hg19_v1_chr2_-_69664568 AK300700 AK308567	-106	-	TSC_hg19_v1_chr2_-_69614353 M90516 BC045641 NM_001244710 NM_002056	-50274	-	BC113692 BC113694 AY335194 NM_001002755 NM_001002756 NM_001002757 NM_015700 TSC_hg19_v1_chr2_-_69664788	80	-	TSC_hg19_v1_chr2_-_69870783 AK310951 AK056043	206089	-	TSC_hg19_v1_chr2_-_69870872 AB028971	206178	-	AY286306|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286307|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BX538347|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AJ132584|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AF132967|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##HQ258750|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK300700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK308567|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##M90516|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##BC045641|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_001244710|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_002056|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##BC113692|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BC113694|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY335194|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_001002755|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_001002756|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_001002757|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_015700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK310951|AAK1|22848|AP2 associated kinase 1##AK056043|AAK1|22848|AP2 associated kinase 1##AB028971|AAK1|22848|AP2 associated kinase 1	0.0	
chr3	44240039	44240220	reg1002610.p1	3.979	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-507708	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-576616	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-576691	-	AK093476 AX748152 NM_001145030	43248	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	139501	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	139818	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.022433	
chr3	49453115	49453247	reg1041049.p1	3.979	+	TSC_hg19_v1_chr3_+_49449855 AK000824 AK311839 CR457411	-3375	+	L41143 NM_022171 TSC_hg19_v1_chr3_+_49449645 BC005157	-3522	+	AK130066 NM_001664 TSC_hg19_v1_chr3_-_49449528	-3655	-	TSC_hg19_v1_chr3_-_49459897 BC007546 AK293481 AK293594 AK294592 AK290600 AK301072 AK091738 AX747153 BC094771 AK296177 AK096062 D13811	6759	-	NM_000481 NM_001164710 NM_001164711 NM_001164712 TSC_hg19_v1_chr3_-_49460121	6935	-	TSC_hg19_v1_chr3_-_49466731 BC005050 AK094248 AF538150 AJ299740 BC050653	13522	-	AK000824|TCTA|6988|T-cell leukemia translocation altered gene##AK311839|TCTA|6988|T-cell leukemia translocation altered gene##CR457411|TCTA|6988|T-cell leukemia translocation altered gene##L41143|TCTA|6988|T-cell leukemia translocation altered gene##NM_022171|TCTA|6988|T-cell leukemia translocation altered gene##BC005157|TCTA|6988|T-cell leukemia translocation altered gene##AK130066|RHOA|387|ras homolog gene family, member A##NM_001664|RHOA|387|ras homolog gene family, member A##BC007546|AMT|275|aminomethyltransferase##AK293481|AMT|275|aminomethyltransferase##AK293594|AMT|275|aminomethyltransferase##AK294592|AMT|275|aminomethyltransferase##AK290600|AMT|275|aminomethyltransferase##AK301072|AMT|275|aminomethyltransferase##AK091738|AMT|275|aminomethyltransferase##BC094771|AMT|275|aminomethyltransferase##AK296177|AMT|275|aminomethyltransferase##AK096062|AMT|275|aminomethyltransferase##D13811|AMT|275|aminomethyltransferase##NM_000481|AMT|275|aminomethyltransferase##NM_001164710|AMT|275|aminomethyltransferase##NM_001164711|AMT|275|aminomethyltransferase##NM_001164712|AMT|275|aminomethyltransferase##BC005050|NICN1|84276|nicolin 1##AK094248|NICN1|84276|nicolin 1##AF538150|NICN1|84276|nicolin 1##AJ299740|NICN1|84276|nicolin 1##BC050653|NICN1|84276|nicolin 1	0.083806	
chr5	40579364	40579544	reg1035143.p2	3.979	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-1154137	-	TSC_hg19_v1_chr5_-_39425082 AK314381	-1154390	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	-1154503	-	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	100573	+	TSC_hg19_v1_chr5_+_40680042 L25124	100590	+	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	176586	-	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33	0.0	
chr9	129055895	129056076	reg1039742.p2	3.979	+	AK309713 NM_001134778	-545508	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-546285	+	TSC_hg19_v1_chr9_-_128469506 AY524429 AY524430 AY524431 AY524432 NM_001006617 NM_001006618 NM_001006619 NM_001006620 NM_001006621 NM_024117	-586466	-	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	33182	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	320776	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	511325	+	AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##AY524429|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524430|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524431|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY524432|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006617|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006618|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006619|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006620|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001006621|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_024117|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43	0.987242	CTCF.p2:29:0.987
chr11	72900396	72900537	reg1034172.p1	3.978	+	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	-47417	-	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-374984	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-375061	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	28878	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	28980	+	AK313942 TSC_hg19_v1_chr11_+_72929608	29150	+	AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.0	
chr12	100651876	100652056	reg1035850.p2	3.978	+	TSC_hg19_v1_chr12_+_100594593 BC015107 NM_022496 AF161399 AK222959 AB038229 AF212251 BC050679 AK023495 AK023684 AK296991 AF175226 CU677213	-57371	+	TSC_hg19_v1_chr12_-_100536644 NM_001006947 NM_015054	-115318	-	BC127017 AK125813 TSC_hg19_v1_chr12_-_100536637 BC014891	-115417	-	BC015117 TSC_hg19_v1_chr12_-_100660855 BC039480 AK090824 AX746635 BC100927 BC100928 BC100929 BC100930 NM_152317	8846	-	TSC_hg19_v1_chr12_+_100661023 AK000936 BC011525	9034	+	TSC_hg19_v1_chr12_+_100661170 AK125091	9214	+	BC015107|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##NM_022496|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AF161399|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK222959|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AB038229|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AF212251|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##BC050679|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK023495|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK023684|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AK296991|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##AF175226|ACTR6|64431|ARP6 actin-related protein 6 homolog (yeast)##NM_001006947|UHRF1BP1L|23074|UHRF1 binding protein 1-like##NM_015054|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC127017|UHRF1BP1L|23074|UHRF1 binding protein 1-like##AK125813|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC014891|UHRF1BP1L|23074|UHRF1 binding protein 1-like##BC015117|DEPDC4|120863|DEP domain containing 4##BC039480|DEPDC4|120863|DEP domain containing 4##AK090824|DEPDC4|120863|DEP domain containing 4##BC100927|DEPDC4|120863|DEP domain containing 4##BC100928|DEPDC4|120863|DEP domain containing 4##BC100929|DEPDC4|120863|DEP domain containing 4##BC100930|DEPDC4|120863|DEP domain containing 4##NM_152317|DEPDC4|120863|DEP domain containing 4##AK000936|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##BC011525|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##AK125091|SCYL2|55681|SCY1-like 2 (S. cerevisiae)	0.0	
chr14	75937278	75937359	reg1038918.p2	3.978	+	BC051303 NM_001135049	-38482	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	-42305	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	-42677	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	51472	+	TSC_hg19_v1_chr14_+_75988840 D42106	51534	+	NM_017791 AY260572 AY260577 BC019087 AK000378	107647	+	BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	0.0	
chr17	65646960	65647141	reg1032998.p1	3.978	+	BC007905 NM_012417 NM_181671	-273127	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-273462	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-273641	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	67000	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	174652	+	AK293224 TSC_hg19_v1_chr17_+_65822221	175167	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.0	
chr22	18447504	18447651	reg1034548.p2	3.978	+	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-190243	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-190354	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	-190370	-	TSC_hg19_v1_chr22_-_18484268 AK127487	36651	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	59684	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	113111	+	BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26	0.0	
chr2	96829877	96830057	reg1017278.p2	3.978	+	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	-18808	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	-19013	-	BC107126 AJ537600 BC107127 NM_001002036	-25794	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	44088	-	TSC_hg19_v1_chr2_+_96874144 AK311432	44187	+	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	44567	-	BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.0	
chr3	122577382	122577486	reg1032233.p1	3.978	+	TSC_hg19_v1_chr3_+_122513981 AK075158	-63430	+	TSC_hg19_v1_chr3_+_122513913 NM_032839 AK027690 AK291176 BC039821 BC033738	-63518	+	CU680100 CU687786 DQ893066 DQ896319 AB590214 AK096705 BC063629 TSC_hg19_v1_chr3_-_122512667 AF400663 BC011897 AK289410 NM_024610	-64831	-	TSC_hg19_v1_chr3_-_122746315 BC077726 AB040878	168932	-	AK309834 TSC_hg19_v1_chr3_-_122746553 AK294528	169117	-	TSC_hg19_v1_chr3_-_122746576 AK291407 NM_001031702	169140	-	AK075158|DIRC2|84925|disrupted in renal carcinoma 2##NM_032839|DIRC2|84925|disrupted in renal carcinoma 2##AK027690|DIRC2|84925|disrupted in renal carcinoma 2##AK291176|DIRC2|84925|disrupted in renal carcinoma 2##BC039821|DIRC2|84925|disrupted in renal carcinoma 2##BC033738|DIRC2|84925|disrupted in renal carcinoma 2##DQ893066|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##DQ896319|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK096705|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC063629|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AF400663|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC011897|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK289410|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##NM_024610|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC077726|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AB040878|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK309834|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK294528|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##AK291407|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B##NM_001031702|SEMA5B|54437|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B	0.258073	CTCF.p2:-35:0.258
chr3	5829728	5829816	reg1037728.p1	3.978	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-600281	+	TSC_hg19_v1_chr3_+_5229430 D86967	-600339	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	-600409	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	1073027	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	1073126	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	2713558	-	DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK124088|LOC100288428|100288428|uncharacterized LOC100288428	0.241876	
chr4	148613778	148613882	reg1036928.p1	3.978	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	-8566	-	TSC_hg19_v1_chr4_+_148538568 AK001708	-75224	+	TSC_hg19_v1_chr4_+_148538547 BC046128 NM_018241	-75297	+	TSC_hg19_v1_chr4_+_148653238 AK123785	39421	+	AB050785 BC128055 NM_024605 BC126899 BC109029 BC109030	39627	+	TSC_hg19_v1_chr4_-_149357955 AB587357	744152	-	BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK001708|TMEM184C|55751|transmembrane protein 184C##BC046128|TMEM184C|55751|transmembrane protein 184C##NM_018241|TMEM184C|55751|transmembrane protein 184C##AK123785|ARHGAP10|79658|Rho GTPase activating protein 10##AB050785|ARHGAP10|79658|Rho GTPase activating protein 10##BC128055|ARHGAP10|79658|Rho GTPase activating protein 10##NM_024605|ARHGAP10|79658|Rho GTPase activating protein 10##BC126899|ARHGAP10|79658|Rho GTPase activating protein 10##BC109029|ARHGAP10|79658|Rho GTPase activating protein 10##BC109030|ARHGAP10|79658|Rho GTPase activating protein 10	0.110059	
chr4	75714247	75714318	reg1036787.p1	3.978	+	BC009799 M30704 NM_001657	-233654	+	BC009799 M30704 NM_001657	-403430	+	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	-483342	+	BC011618 S55606 AB109441 NM_001729	5501	-	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	144090	+	TSC_hg19_v1_chr4_-_76439504 AK309555 AK308754 AB528599 AF247041 CU689096 CU690404 GQ129342 GQ129343 GQ250944 GQ250945 GQ250946 JF691538 JF691539 AB209072 AF255666 AY888047 GU937000 AF305424	725234	-	BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK309555|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK308754|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF247041|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129342|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129343|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250944|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250945|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250946|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AB209072|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF255666|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AY888047|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GU937000|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF305424|RCHY1|25898|ring finger and CHY zinc finger domain containing 1	0.0	
chr10	73069672	73069770	reg1035266.p2	3.977	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-97341	+	NM_000281	-421181	-	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	-421419	-	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	9304	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	9325	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	87017	+	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_000281|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23	0.0	
chr14	61992252	61992375	reg1030174.p2	3.977	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-203786	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-243791	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-244119	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	169877	+	FJ790247 NM_001243084	172026	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	236806	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.0	
chr15	30852371	30852467	reg1036560.p1	3.977	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-166707	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-737796	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-738077	-	TSC_hg19_v1_chr15_+_30918372 BC071990	65967	+	BC105788 NM_001039841	66459	+	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	343655	+	BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1	0.118751	
chr15	78707886	78707988	reg1038337.p1	3.977	+	TSC_hg19_v1_chr15_+_78632694 NM_004378 AB593091 BC022069 S74445 DQ896830 EU176284 CR457017 AL110113	-75234	+	TSC_hg19_v1_chr15_-_78591935 AF127799 AF100786 BC010080 AK311320 BC002565 AK024754 NM_025234 AK300838 AK304617 AK310477	-115964	-	BC031044 NM_001130183	-149397	+	TSC_hg19_v1_chr15_+_78730557 NM_004136	22584	+	TSC_hg19_v1_chr15_+_78730595 AB209403 BC017880 AK292992 BC117481 BC117483 BC143948 AB586699 HQ258663 M58511	22686	+	TSC_hg19_v1_chr15_+_78799930 NM_001013619 NM_001083612 AK126453 BC132753 BC144383	91990	+	NM_004378|CRABP1|1381|cellular retinoic acid binding protein 1##AB593091|CRABP1|1381|cellular retinoic acid binding protein 1##BC022069|CRABP1|1381|cellular retinoic acid binding protein 1##S74445|CRABP1|1381|cellular retinoic acid binding protein 1##DQ896830|CRABP1|1381|cellular retinoic acid binding protein 1##EU176284|CRABP1|1381|cellular retinoic acid binding protein 1##CR457017|CRABP1|1381|cellular retinoic acid binding protein 1##AL110113|CRABP1|1381|cellular retinoic acid binding protein 1##AF127799|WDR61|80349|WD repeat domain 61##AF100786|WDR61|80349|WD repeat domain 61##BC010080|WDR61|80349|WD repeat domain 61##AK311320|WDR61|80349|WD repeat domain 61##AK024754|WDR61|80349|WD repeat domain 61##NM_025234|WDR61|80349|WD repeat domain 61##AK300838|WDR61|80349|WD repeat domain 61##AK304617|WDR61|80349|WD repeat domain 61##BC031044|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_001130183|DNAJA4|55466|DnaJ (Hsp40) homolog, subfamily A, member 4##NM_004136|IREB2|3658|iron-responsive element binding protein 2##AB209403|IREB2|3658|iron-responsive element binding protein 2##BC017880|IREB2|3658|iron-responsive element binding protein 2##AK292992|IREB2|3658|iron-responsive element binding protein 2##BC117481|IREB2|3658|iron-responsive element binding protein 2##BC117483|IREB2|3658|iron-responsive element binding protein 2##BC143948|IREB2|3658|iron-responsive element binding protein 2##HQ258663|IREB2|3658|iron-responsive element binding protein 2##M58511|IREB2|3658|iron-responsive element binding protein 2##NM_001013619|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##NM_001083612|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##AK126453|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##BC132753|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1##BC144383|AGPHD1|123688|aminoglycoside phosphotransferase domain containing 1	0.123086	
chr18	65131231	65131346	reg1030961.p1	3.977	+	AJ007607 NM_021153 AK304000 AK315257 BC015877	-859977	-	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-1713086	+	TSC_hg19_v1_chr18_+_63417845 BC036786	-1713422	+	AK021849 TSC_hg19_v1_chr18_-_65182656	51295	-	TSC_hg19_v1_chr18_-_65183956 NM_032160	52658	-	AM393206 AM393295 CU689334 TSC_hg19_v1_chr18_-_66382307 AK307269 AK295551 BC032325 AL832341 AL832356 BC093792 BC093794 BC143400 AB058733	1250978	-	AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AK021849|DSEL|92126|dermatan sulfate epimerase-like##NM_032160|DSEL|92126|dermatan sulfate epimerase-like##AM393206|TMX3|54495|thioredoxin-related transmembrane protein 3##AM393295|TMX3|54495|thioredoxin-related transmembrane protein 3##AK307269|TMX3|54495|thioredoxin-related transmembrane protein 3##AK295551|TMX3|54495|thioredoxin-related transmembrane protein 3##BC032325|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832341|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832356|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093792|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093794|TMX3|54495|thioredoxin-related transmembrane protein 3##BC143400|TMX3|54495|thioredoxin-related transmembrane protein 3##AB058733|TMX3|54495|thioredoxin-related transmembrane protein 3	0.51023	CTCF.p2:-22:0.510
chr20	30421342	30421433	reg1024390.p2	3.977	+	AJ272502 BC092413 NM_033118 BX647635	-14203	+	NM_012112 TSC_hg19_v1_chr20_+_30327092 AK312549 AB024704 AF098158 AF287265 BC020207 BC004136	-94350	+	TSC_hg19_v1_chr20_-_30311772 BX647525	-109647	-	AF042831 BT009768 AB464535 DQ896105 EU176391 BC013408 NM_004118	11982	-	NM_001012644	36413	-	NM_177991 AK091960 CU691186	36688	-	AJ272502|MYLK2|85366|myosin light chain kinase 2##BC092413|MYLK2|85366|myosin light chain kinase 2##NM_033118|MYLK2|85366|myosin light chain kinase 2##BX647635|MYLK2|85366|myosin light chain kinase 2##NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BX647525|BCL2L1|598|BCL2-like 1##AF042831|FOXS1|2307|forkhead box S1##BT009768|FOXS1|2307|forkhead box S1##DQ896105|FOXS1|2307|forkhead box S1##EU176391|FOXS1|2307|forkhead box S1##BC013408|FOXS1|2307|forkhead box S1##NM_004118|FOXS1|2307|forkhead box S1##NM_001012644|DUSP15|128853|dual specificity phosphatase 15##NM_177991|DUSP15|128853|dual specificity phosphatase 15##AK091960|DUSP15|128853|dual specificity phosphatase 15	0.0	
chr2	174617025	174617131	reg1036493.p1	3.977	+	TSC_hg19_v1_chr2_+_174219599 AY029179 NM_031942 NM_145810 AK027642 AK027628 BC027966 AK075134 AK297097 AK300949 AK297245 AL834186 CU693352 AB527763	-397465	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	-676430	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	-676532	+	AK023489 TSC_hg19_v1_chr2_-_174767427	150276	-	X68560 TSC_hg19_v1_chr2_-_174828559 M97191	211469	-	TSC_hg19_v1_chr2_-_174828899 AY070137 NM_001017371	211794	-	AY029179|CDCA7|83879|cell division cycle associated 7##NM_031942|CDCA7|83879|cell division cycle associated 7##NM_145810|CDCA7|83879|cell division cycle associated 7##AK027642|CDCA7|83879|cell division cycle associated 7##AK027628|CDCA7|83879|cell division cycle associated 7##BC027966|CDCA7|83879|cell division cycle associated 7##AK075134|CDCA7|83879|cell division cycle associated 7##AK297097|CDCA7|83879|cell division cycle associated 7##AK300949|CDCA7|83879|cell division cycle associated 7##AK297245|CDCA7|83879|cell division cycle associated 7##AL834186|CDCA7|83879|cell division cycle associated 7##AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##X68560|SP3|6670|Sp3 transcription factor##M97191|SP3|6670|Sp3 transcription factor##AY070137|SP3|6670|Sp3 transcription factor##NM_001017371|SP3|6670|Sp3 transcription factor	0.761179	CTCF.p2:-2:0.761
chr5	133436192	133436336	reg1034127.p2	3.977	+	AK095989 NM_003374	-95441	-	TSC_hg19_v1_chr5_-_133340431 L06132	-95834	-	TSC_hg19_v1_chr5_-_133340397 BC071168 AK293639	-95863	-	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	14255	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	15097	+	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	76359	-	AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##L06132|VDAC1|7416|voltage-dependent anion channel 1##BC071168|VDAC1|7416|voltage-dependent anion channel 1##AK293639|VDAC1|7416|voltage-dependent anion channel 1##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1	0.0	
chr5	153569333	153569453	reg1025820.p1	3.977	+	TSC_hg19_v1_chr5_+_153418558 AK315573 BC026244	-150833	+	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	-150869	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	-150936	-	TSC_hg19_v1_chr5_+_153570292 BC050333 NM_198321 AK127135 AB078145 AB527381 AJ505950 AK074132	965	+	TSC_hg19_v1_chr5_-_153825380 BC042059 AK095428	255974	-	TSC_hg19_v1_chr5_+_153825535 AK021588 NM_001131062 NM_001131063 NM_024632	256126	+	AK315573|MFAP3|4238|microfibrillar-associated protein 3##BC026244|MFAP3|4238|microfibrillar-associated protein 3##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2##BC050333|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##NM_198321|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK127135|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AB078145|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AJ505950|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK074132|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##BC042059|FLJ38109|386627|uncharacterized LOC386627##AK095428|FLJ38109|386627|uncharacterized LOC386627##AK021588|SAP30L|79685|SAP30-like##NM_001131062|SAP30L|79685|SAP30-like##NM_001131063|SAP30L|79685|SAP30-like##NM_024632|SAP30L|79685|SAP30-like	0.0	
chr9	139796923	139797023	reg1031275.p1	3.977	+	U12597 BC033810 AK054686 BC032410 TSC_hg19_v1_chr9_+_139780991	-15986	+	TSC_hg19_v1_chr9_+_139780967 BX538160 BC043492 NM_021138 AK222961 AK294607 AK298370	-16020	+	BT009863 CR541914 DQ891577 DQ894770 AB590058 TSC_hg19_v1_chr9_-_139760757 AJ005259 AB002282 AB002283 BC015500 NM_003792 NM_153200	-36235	-	TSC_hg19_v1_chr9_-_139839068 AK026081	42095	-	BC014297 TSC_hg19_v1_chr9_-_139839082 AK315738	42111	-	BC014130 TSC_hg19_v1_chr9_-_139839140 BC035355 BC031100 NM_018998	42163	-	BC033810|TRAF2|7186|TNF receptor-associated factor 2##AK054686|TRAF2|7186|TNF receptor-associated factor 2##BC032410|TRAF2|7186|TNF receptor-associated factor 2##BX538160|TRAF2|7186|TNF receptor-associated factor 2##BC043492|TRAF2|7186|TNF receptor-associated factor 2##NM_021138|TRAF2|7186|TNF receptor-associated factor 2##AK222961|TRAF2|7186|TNF receptor-associated factor 2##AK294607|TRAF2|7186|TNF receptor-associated factor 2##AK298370|TRAF2|7186|TNF receptor-associated factor 2##BT009863|EDF1|8721|endothelial differentiation-related factor 1##CR541914|EDF1|8721|endothelial differentiation-related factor 1##DQ891577|EDF1|8721|endothelial differentiation-related factor 1##DQ894770|EDF1|8721|endothelial differentiation-related factor 1##AB002282|EDF1|8721|endothelial differentiation-related factor 1##AB002283|EDF1|8721|endothelial differentiation-related factor 1##BC015500|EDF1|8721|endothelial differentiation-related factor 1##NM_003792|EDF1|8721|endothelial differentiation-related factor 1##NM_153200|EDF1|8721|endothelial differentiation-related factor 1##AK026081|FBXW5|54461|F-box and WD repeat domain containing 5##BC014297|FBXW5|54461|F-box and WD repeat domain containing 5##AK315738|FBXW5|54461|F-box and WD repeat domain containing 5##BC014130|FBXW5|54461|F-box and WD repeat domain containing 5##BC035355|FBXW5|54461|F-box and WD repeat domain containing 5##BC031100|FBXW5|54461|F-box and WD repeat domain containing 5##NM_018998|FBXW5|54461|F-box and WD repeat domain containing 5	0.41807	CTCF.p2:-65:0.418
chr9	37375014	37375137	reg1034250.p2	3.977	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-254492	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-254567	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-254589	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	47631	+	BC010007 TSC_hg19_v1_chr9_-_37465267	90185	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	90320	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.178945	
chr10	6390323	6390443	reg1028450.p2	3.976	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-145507	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-203471	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-203499	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	231878	-	TSC_hg19_v1_chr10_+_6622460 AY007155	232097	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	1060867	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.0	
chr13	107188180	107188360	reg1007799.p1	3.976	+	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	-921	-	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-1069679	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	-1069966	+	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	32215	-	NM_001080396	1331189	-	NM_002312 X83441	1678859	-	BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A##NM_002312|LIG4|3981|ligase IV, DNA, ATP-dependent##X83441|LIG4|3981|ligase IV, DNA, ATP-dependent	0.0	
chr17	26881722	26881806	reg1034343.p2	3.976	+	NM_005148 NM_054035 TSC_hg19_v1_chr17_-_26879647 AB593014	-2112	-	AF028788 AF028789 TSC_hg19_v1_chr17_-_26879616 AK292329 BC027176 U40998	-2154	-	NM_003593 Y11739	-30806	+	AY359112 AB057723 AB527641 CU686718 TSC_hg19_v1_chr17_-_26898525 AK055512 BC069228 AK075428 AK297046 AK314583	16765	-	NM_033198	17122	-	AK312281 TSC_hg19_v1_chr17_-_26903883 AF054987 BC106925 BC106926 AK293453 AK296039 BC003613 BC065565 BC103760 AK293623 AK293693 AK294157 AK294091	22119	-	NM_005148|UNC119|9094|unc-119 homolog (C. elegans)##NM_054035|UNC119|9094|unc-119 homolog (C. elegans)##AB593014|UNC119|9094|unc-119 homolog (C. elegans)##AF028788|UNC119|9094|unc-119 homolog (C. elegans)##AF028789|UNC119|9094|unc-119 homolog (C. elegans)##AK292329|UNC119|9094|unc-119 homolog (C. elegans)##BC027176|UNC119|9094|unc-119 homolog (C. elegans)##U40998|UNC119|9094|unc-119 homolog (C. elegans)##NM_003593|FOXN1|8456|forkhead box N1##Y11739|FOXN1|8456|forkhead box N1##AY359112|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AB057723|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK055512|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##BC069228|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK075428|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK297046|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK314583|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##NM_033198|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK312281|ALDOC|230|aldolase C, fructose-bisphosphate##AF054987|ALDOC|230|aldolase C, fructose-bisphosphate##BC106925|ALDOC|230|aldolase C, fructose-bisphosphate##BC106926|ALDOC|230|aldolase C, fructose-bisphosphate##AK293453|ALDOC|230|aldolase C, fructose-bisphosphate##AK296039|ALDOC|230|aldolase C, fructose-bisphosphate##BC003613|ALDOC|230|aldolase C, fructose-bisphosphate##BC065565|ALDOC|230|aldolase C, fructose-bisphosphate##BC103760|ALDOC|230|aldolase C, fructose-bisphosphate##AK293623|ALDOC|230|aldolase C, fructose-bisphosphate##AK293693|ALDOC|230|aldolase C, fructose-bisphosphate##AK294157|ALDOC|230|aldolase C, fructose-bisphosphate##AK294091|ALDOC|230|aldolase C, fructose-bisphosphate	0.321262	CTCF.p2:-31:0.321
chr17	42816186	42816255	reg1037226.p2	3.976	+	CU677579 AK295296 BC026999 TSC_hg19_v1_chr17_+_42786269	-29983	+	TSC_hg19_v1_chr17_+_42786060 BC033660	-30158	+	BC016158 NM_025104 NM_145663 AK303282 TSC_hg19_v1_chr17_+_42786023 AK023149 AF448801	-30208	+	BC144550 AB462930 AB009675 NM_002390 TSC_hg19_v1_chr17_+_42836567 AK296512	20399	+	NM_005497 TSC_hg19_v1_chr17_-_42907633	91420	-	NM_001080383	91958	-	AK295296|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##BC026999|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##BC033660|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##BC016158|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##NM_025104|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##NM_145663|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##AK303282|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##AK023149|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##AF448801|DBF4B|80174|DBF4 homolog B (S. cerevisiae)##BC144550|ADAM11|4185|ADAM metallopeptidase domain 11##AB009675|ADAM11|4185|ADAM metallopeptidase domain 11##NM_002390|ADAM11|4185|ADAM metallopeptidase domain 11##AK296512|ADAM11|4185|ADAM metallopeptidase domain 11##NM_005497|GJC1|10052|gap junction protein, gamma 1, 45kDa##NM_001080383|GJC1|10052|gap junction protein, gamma 1, 45kDa	0.0	
chr2	62356800	62356980	reg1031626.p2	3.976	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-224061	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-241104	-	TSC_hg19_v1_chr2_-_62115733 BC106933 BC106934 AF026291	-241156	-	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	66376	+	BC047439 AK091902 AX747245 NM_198276	376649	-	AK292545 NM_001142615	544095	+	AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106933|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC106934|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AF026291|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1	0.0	
chr2	62561972	62562076	reg1029258.p2	3.976	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-138758	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-429195	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-446238	-	BC047439 AK091902 AX747245 NM_198276	171515	-	AK292545 NM_001142615	338961	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	370942	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr3	126422772	126422862	reg1029451.p1	3.976	+	TSC_hg19_v1_chr3_-_126373968 NM_001173513 NM_052883	-48841	-	TSC_hg19_v1_chr3_-_126373947 AK299502 BC030028 BC050032	-48903	-	AB113648 NM_001039783	-95420	-	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	260	+	AB385178 NM_032242 X87832	284623	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	489177	+	NM_001173513|TXNRD3|114112|thioredoxin reductase 3##NM_052883|TXNRD3|114112|thioredoxin reductase 3##AK299502|TXNRD3|114112|thioredoxin reductase 3##BC030028|TXNRD3|114112|thioredoxin reductase 3##BC050032|TXNRD3|114112|thioredoxin reductase 3##AB113648|TXNRD3NB|645840|thioredoxin reductase 3 neighbor##NM_001039783|TXNRD3NB|645840|thioredoxin reductase 3 neighbor##AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56	0.468804	CTCF.p2:9:0.469
chr3	38749388	38749476	reg1032811.p1	3.976	+	M77235 NM_000335 NM_001099404 NM_001099405 NM_198056 BC051374 NM_001160160 NM_001160161	-58292	-	TSC_hg19_v1_chr3_+_38537982 AK315814	-211452	+	BC015820 TSC_hg19_v1_chr3_+_38537851 BC065368 AK023235 AK289602	-211582	+	AF117907 NM_006514	86068	-	AF109737 AF150882 NM_014139	242619	-	TSC_hg19_v1_chr3_+_39093498 AB040882 AK025513 AK297349 AK298810 AK302307 BC026353 NM_020839 BC037168 AB385469 AF468833 AL832926	344069	+	M77235|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_000335|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099404|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001099405|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_198056|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##BC051374|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160160|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##NM_001160161|SCN5A|6331|sodium channel, voltage-gated, type V, alpha subunit##AK315814|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC015820|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##BC065368|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK023235|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AK289602|EXOG|9941|endo/exonuclease (5'-3'), endonuclease G-like##AF117907|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##NM_006514|SCN10A|6336|sodium channel, voltage-gated, type X, alpha subunit##AF109737|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AF150882|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##NM_014139|SCN11A|11280|sodium channel, voltage-gated, type XI, alpha subunit##AB040882|WDR48|57599|WD repeat domain 48##AK025513|WDR48|57599|WD repeat domain 48##AK297349|WDR48|57599|WD repeat domain 48##AK298810|WDR48|57599|WD repeat domain 48##AK302307|WDR48|57599|WD repeat domain 48##BC026353|WDR48|57599|WD repeat domain 48##NM_020839|WDR48|57599|WD repeat domain 48##BC037168|WDR48|57599|WD repeat domain 48##AF468833|WDR48|57599|WD repeat domain 48##AL832926|WDR48|57599|WD repeat domain 48	0.976834	CTCF.p2:-7:0.977
chr6	13328592	13328690	reg1033753.p1	3.976	+	AK091836 AX747210 NM_001242698	-32824	-	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-611598	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-611698	+	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	59	-	AK027010 NM_001242630	79727	-	AK055131 AF264036 NM_001242628	157757	-	AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AK055131|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF264036|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242628|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr8	120067297	120067363	reg1037773.p1	3.976	+	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	-103110	-	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	-433123	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	-433205	-	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	12139	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	153309	+	NM_002514 AK294289 AK312355 TSC_hg19_v1_chr8_+_120428685 AY082381 X96584 BC015028 CU677181 AB463923 DQ891179 DQ894361 CR457432	361331	+	AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_002514|NOV|4856|nephroblastoma overexpressed gene##AK294289|NOV|4856|nephroblastoma overexpressed gene##AK312355|NOV|4856|nephroblastoma overexpressed gene##AY082381|NOV|4856|nephroblastoma overexpressed gene##X96584|NOV|4856|nephroblastoma overexpressed gene##BC015028|NOV|4856|nephroblastoma overexpressed gene##DQ891179|NOV|4856|nephroblastoma overexpressed gene##DQ894361|NOV|4856|nephroblastoma overexpressed gene##CR457432|NOV|4856|nephroblastoma overexpressed gene	0.0	
chr9	92445326	92445487	reg1031489.p2	3.976	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-225425	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-332399	-	BC054500 NM_001142287 NM_006378	-350796	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	959713	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1118630	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	1118661	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.025024	
chr12	123874311	123874396	reg1039547.p1	3.975	+	AY064546 TSC_hg19_v1_chr12_+_123873657	-724	+	TSC_hg19_v1_chr12_+_123868724 AY102937 AB464199	-5630	+	TSC_hg19_v1_chr12_+_123868678 AK292645 NM_020382	-5698	+	CU680478 DQ892579 DQ895796 TSC_hg19_v1_chr12_-_123921017 AB085763 BC013042	46659	-	TSC_hg19_v1_chr12_-_123921232 AK056934 NM_145058	46888	-	NM_022717 AK290127 TSC_hg19_v1_chr12_+_123942685 BC047678 BC020829 U44799 BC054034	68350	+	AY064546|SETD8|387893|SET domain containing (lysine methyltransferase) 8##AY102937|SETD8|387893|SET domain containing (lysine methyltransferase) 8##AK292645|SETD8|387893|SET domain containing (lysine methyltransferase) 8##NM_020382|SETD8|387893|SET domain containing (lysine methyltransferase) 8##DQ892579|RILPL2|196383|Rab interacting lysosomal protein-like 2##DQ895796|RILPL2|196383|Rab interacting lysosomal protein-like 2##AB085763|RILPL2|196383|Rab interacting lysosomal protein-like 2##BC013042|RILPL2|196383|Rab interacting lysosomal protein-like 2##AK056934|RILPL2|196383|Rab interacting lysosomal protein-like 2##NM_145058|RILPL2|196383|Rab interacting lysosomal protein-like 2##NM_022717|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##AK290127|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC047678|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##U44799|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC054034|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)	0.0	
chr17	16289904	16290016	reg1007498.p1	3.975	+	AK129498 BC015127 BC026301 BC031027 BC038999 TSC_hg19_v1_chr17_+_16284408 BC046123 BC009301	-5546	+	TSC_hg19_v1_chr17_+_16284404 AK300882	-5558	+	TSC_hg19_v1_chr17_+_16284371 BC000379 NM_018955	-5596	+	TSC_hg19_v1_chr17_+_16318881 AK289705 NM_016113 BC018926 BC051305	28913	+	TSC_hg19_v1_chr17_+_16318917 AK001896	28958	+	TSC_hg19_v1_chr17_+_16319096 AF103906	29145	+	AK129498|UBB|7314|ubiquitin B##BC015127|UBB|7314|ubiquitin B##BC026301|UBB|7314|ubiquitin B##BC031027|UBB|7314|ubiquitin B##BC038999|UBB|7314|ubiquitin B##BC046123|UBB|7314|ubiquitin B##BC009301|UBB|7314|ubiquitin B##AK300882|UBB|7314|ubiquitin B##BC000379|UBB|7314|ubiquitin B##NM_018955|UBB|7314|ubiquitin B##AK289705|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##NM_016113|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##BC018926|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##BC051305|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AK001896|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2##AF103906|TRPV2|51393|transient receptor potential cation channel, subfamily V, member 2	0.0	
chr17	70461821	70461966	reg1024418.p2	3.975	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-344653	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-344723	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-344734	+	AK000477 TSC_hg19_v1_chr17_-_70588944	127050	-	AF331643 TSC_hg19_v1_chr17_-_71088816	626923	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	626930	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr20	18734861	18735032	reg1036581.p2	3.975	+	TSC_hg19_v1_chr20_+_18568661 NM_080820 BC045167 AK074304 BC100923 BC100924 BC100925 BC100926 AK291440 AF332356 CU692252	-166296	+	BC092494 AK024594 BC015983 TSC_hg19_v1_chr20_+_18548094 BC039422 BC127753 BC127754 BC141963 BC141964 BC150559 BC150560 AF147354	-186846	+	TSC_hg19_v1_chr20_+_18488583 AK299171 BC001575 AK299513 NM_001172745 BC005404	-246320	+	AF418568 AF418570 AX721297 NM_178483 AK130970 AY248902 BC105121 BC112024	59452	+	NM_001242671	75892	-	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	458339	+	NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC092494|LINC00493|388789|long intergenic non-protein coding RNA 493##AK024594|LINC00493|388789|long intergenic non-protein coding RNA 493##BC015983|LINC00493|388789|long intergenic non-protein coding RNA 493##BC039422|LINC00493|388789|long intergenic non-protein coding RNA 493##BC127753|LINC00493|388789|long intergenic non-protein coding RNA 493##BC127754|LINC00493|388789|long intergenic non-protein coding RNA 493##BC141963|LINC00493|388789|long intergenic non-protein coding RNA 493##BC141964|LINC00493|388789|long intergenic non-protein coding RNA 493##BC150559|LINC00493|388789|long intergenic non-protein coding RNA 493##BC150560|LINC00493|388789|long intergenic non-protein coding RNA 493##AF147354|LINC00493|388789|long intergenic non-protein coding RNA 493##AK299171|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC001575|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AK299513|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_001172745|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC005404|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AF418568|C20orf79|140856|chromosome 20 open reading frame 79##AF418570|C20orf79|140856|chromosome 20 open reading frame 79##NM_178483|C20orf79|140856|chromosome 20 open reading frame 79##AK130970|C20orf79|140856|chromosome 20 open reading frame 79##AY248902|C20orf79|140856|chromosome 20 open reading frame 79##BC105121|C20orf79|140856|chromosome 20 open reading frame 79##BC112024|C20orf79|140856|chromosome 20 open reading frame 79##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3	0.195031	
chr22	22121522	22121678	reg1033124.p2	3.975	+	BC034486 BC074501 TSC_hg19_v1_chr22_-_22090057 BC048303 NM_013313 AB098734 AB098735	-31552	-	NM_014337 NM_148175 NM_148176 TSC_hg19_v1_chr22_+_22020298 AF320072 AK289545 BC000022 U37219 AK127259 BC028385 AK299206 CR456548 DQ891659 DQ894846 AB463162 CU013148 CU013436 CU673996 CU688484	-101271	+	TSC_hg19_v1_chr22_+_21996619 CR456570 AF277316 AB528230 BC139837 CU013169 CU013457	-124961	+	TSC_hg19_v1_chr22_-_22221936 DQ399292 AB384931 EU176323 EU831429 EU831522 AK307615 Z11694 AK090869 BC099905	100229	-	AK295188 TSC_hg19_v1_chr22_-_22221938	100337	-	TSC_hg19_v1_chr22_-_22221955 BC017832 NM_002745 NM_138957	100370	-	BC034486|YPEL1|29799|yippee-like 1 (Drosophila)##BC074501|YPEL1|29799|yippee-like 1 (Drosophila)##BC048303|YPEL1|29799|yippee-like 1 (Drosophila)##NM_013313|YPEL1|29799|yippee-like 1 (Drosophila)##AB098734|YPEL1|29799|yippee-like 1 (Drosophila)##AB098735|YPEL1|29799|yippee-like 1 (Drosophila)##NM_014337|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148175|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##NM_148176|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AF320072|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK289545|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC000022|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##U37219|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK127259|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##BC028385|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##AK299206|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456548|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ891659|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##DQ894846|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013148|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CU013436|PPIL2|23759|peptidylprolyl isomerase (cyclophilin)-like 2##CR456570|SDF2L1|23753|stromal cell-derived factor 2-like 1##AF277316|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC139837|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013169|SDF2L1|23753|stromal cell-derived factor 2-like 1##CU013457|SDF2L1|23753|stromal cell-derived factor 2-like 1##DQ399292|MAPK1|5594|mitogen-activated protein kinase 1##EU176323|MAPK1|5594|mitogen-activated protein kinase 1##EU831429|MAPK1|5594|mitogen-activated protein kinase 1##EU831522|MAPK1|5594|mitogen-activated protein kinase 1##AK307615|MAPK1|5594|mitogen-activated protein kinase 1##Z11694|MAPK1|5594|mitogen-activated protein kinase 1##AK090869|MAPK1|5594|mitogen-activated protein kinase 1##BC099905|MAPK1|5594|mitogen-activated protein kinase 1##AK295188|MAPK1|5594|mitogen-activated protein kinase 1##BC017832|MAPK1|5594|mitogen-activated protein kinase 1##NM_002745|MAPK1|5594|mitogen-activated protein kinase 1##NM_138957|MAPK1|5594|mitogen-activated protein kinase 1	0.0	
chr3	170578141	170578252	reg1032270.p1	3.975	+	TSC_hg19_v1_chr3_-_170303774 AK122655 NM_020949	-274378	-	AK098766 NM_001185056 AK294087	-439155	+	NM_005602 TSC_hg19_v1_chr3_+_170136652 AK294108 AK312923 BC013577	-441538	+	TSC_hg19_v1_chr3_-_170587985 BC107708 AL110170 BC062731 NM_001099645	9799	-	TSC_hg19_v1_chr3_-_170626397 AK311962 BC036072	48195	-	AY205258 AY205259 AY205260 AY205261 NM_020390 TSC_hg19_v1_chr3_-_170626427	48263	-	AK122655|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_020949|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_001185056|CLDN11|5010|claudin 11##AK294087|CLDN11|5010|claudin 11##NM_005602|CLDN11|5010|claudin 11##AK312923|CLDN11|5010|claudin 11##BC013577|CLDN11|5010|claudin 11##BC107708|RPL22L1|200916|ribosomal protein L22-like 1##AL110170|RPL22L1|200916|ribosomal protein L22-like 1##BC062731|RPL22L1|200916|ribosomal protein L22-like 1##NM_001099645|RPL22L1|200916|ribosomal protein L22-like 1##AK311962|EIF5A2|56648|eukaryotic translation initiation factor 5A2##BC036072|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205258|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205259|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205260|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205261|EIF5A2|56648|eukaryotic translation initiation factor 5A2##NM_020390|EIF5A2|56648|eukaryotic translation initiation factor 5A2	0.0	
chr3	40823751	40823868	reg1036901.p1	3.975	+	TSC_hg19_v1_chr3_+_40566471 BC101619 BC113415 CR749268	-257309	+	TSC_hg19_v1_chr3_+_40566380 AK127181 NM_001098414 NM_198484 AX721066 AK074366	-257407	+	AK131232 AX721156 NM_175888 AK093599 AX748220 TSC_hg19_v1_chr3_+_40547598	-276225	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	417140	+	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	417215	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	1179750	-	BC101619|ZNF621|285268|zinc finger protein 621##BC113415|ZNF621|285268|zinc finger protein 621##CR749268|ZNF621|285268|zinc finger protein 621##AK127181|ZNF621|285268|zinc finger protein 621##NM_001098414|ZNF621|285268|zinc finger protein 621##NM_198484|ZNF621|285268|zinc finger protein 621##AK074366|ZNF621|285268|zinc finger protein 621##AK131232|ZNF620|253639|zinc finger protein 620##NM_175888|ZNF620|253639|zinc finger protein 620##AK093599|ZNF620|253639|zinc finger protein 620##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)	0.032128	
chr3	72631340	72631452	reg1035705.p1	3.975	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-797125	-	AK313656 NM_173359	-827473	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-827874	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	266152	-	BC017274 TSC_hg19_v1_chr3_-_72897575	266179	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	266196	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr7	530254	530434	reg1030631.p1	3.975	+	NM_001195127	-200209	+	BC040074 TSC_hg19_v1_chr7_+_193137	-337199	+	AF533706 NM_020223 TSC_hg19_v1_chr7_+_193043	-337327	+	TSC_hg19_v1_chr7_-_558849 AK292217	28490	-	X03795 X06374 TSC_hg19_v1_chr7_-_559093	28720	-	TSC_hg19_v1_chr7_-_559484 NM_002607 NM_033023	29141	-	NM_001195127|LOC100288524|100288524|forkhead box L1-like##BC040074|FAM20C|56975|family with sequence similarity 20, member C##AF533706|FAM20C|56975|family with sequence similarity 20, member C##NM_020223|FAM20C|56975|family with sequence similarity 20, member C##AK292217|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X03795|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X06374|PDGFA|5154|platelet-derived growth factor alpha polypeptide##NM_002607|PDGFA|5154|platelet-derived growth factor alpha polypeptide##NM_033023|PDGFA|5154|platelet-derived growth factor alpha polypeptide	0.143036	
chr9	134113457	134113547	reg1033460.p2	3.975	+	TSC_hg19_v1_chr9_+_134001016 D14689 AB159230	-112452	+	TSC_hg19_v1_chr9_+_134000975 BC105998 AK307573 NM_005085 AL832609 X64228 BC045620 BC012500	-112528	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	-141544	+	BC049388 NM_033387 AK095423	38417	-	TSC_hg19_v1_chr9_+_134165108 AK075207 NM_032728 BC006362 AK027568 AK315502 AB385550	51726	+	TSC_hg19_v1_chr9_+_134269515 BC002872	156064	+	D14689|NUP214|8021|nucleoporin 214kDa##AB159230|NUP214|8021|nucleoporin 214kDa##BC105998|NUP214|8021|nucleoporin 214kDa##AK307573|NUP214|8021|nucleoporin 214kDa##NM_005085|NUP214|8021|nucleoporin 214kDa##AL832609|NUP214|8021|nucleoporin 214kDa##X64228|NUP214|8021|nucleoporin 214kDa##BC045620|NUP214|8021|nucleoporin 214kDa##BC012500|NUP214|8021|nucleoporin 214kDa##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like##BC049388|FAM78A|286336|family with sequence similarity 78, member A##NM_033387|FAM78A|286336|family with sequence similarity 78, member A##AK095423|FAM78A|286336|family with sequence similarity 78, member A##AK075207|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##NM_032728|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC006362|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK027568|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK315502|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC002872|PRRC2B|84726|proline-rich coiled-coil 2B	0.0	
chr1	159892996	159893091	reg1020056.p1	3.974	+	BC089391 BC027874 NM_012337 BC064386 AF094758 AK308262 AK225566 AK225582 AK292249	-23118	-	HQ258612 BC132893 BC132895 NM_001013661	-60665	-	AK096506 NM_001134233	-67907	-	BC009357 TSC_hg19_v1_chr1_-_159895269	2222	-	TSC_hg19_v1_chr1_-_159895294 BC002616 D21261 GU727636 NM_003564 AK291562 AK298654	2244	-	TSC_hg19_v1_chr1_-_159915401 AB037776 BC030141 NM_001135050 NM_020789 AY358128	22351	-	BC089391|CCDC19|25790|coiled-coil domain containing 19##BC027874|CCDC19|25790|coiled-coil domain containing 19##NM_012337|CCDC19|25790|coiled-coil domain containing 19##BC064386|CCDC19|25790|coiled-coil domain containing 19##AF094758|CCDC19|25790|coiled-coil domain containing 19##AK308262|CCDC19|25790|coiled-coil domain containing 19##AK225566|CCDC19|25790|coiled-coil domain containing 19##AK225582|CCDC19|25790|coiled-coil domain containing 19##AK292249|CCDC19|25790|coiled-coil domain containing 19##HQ258612|VSIG8|391123|V-set and immunoglobulin domain containing 8##BC132893|VSIG8|391123|V-set and immunoglobulin domain containing 8##BC132895|VSIG8|391123|V-set and immunoglobulin domain containing 8##NM_001013661|VSIG8|391123|V-set and immunoglobulin domain containing 8##AK096506|C1orf204|284677|chromosome 1 open reading frame 204##NM_001134233|C1orf204|284677|chromosome 1 open reading frame 204##BC009357|TAGLN2|8407|transgelin 2##BC002616|TAGLN2|8407|transgelin 2##D21261|TAGLN2|8407|transgelin 2##GU727636|TAGLN2|8407|transgelin 2##NM_003564|TAGLN2|8407|transgelin 2##AK291562|TAGLN2|8407|transgelin 2##AK298654|TAGLN2|8407|transgelin 2##AB037776|IGSF9|57549|immunoglobulin superfamily, member 9##BC030141|IGSF9|57549|immunoglobulin superfamily, member 9##NM_001135050|IGSF9|57549|immunoglobulin superfamily, member 9##NM_020789|IGSF9|57549|immunoglobulin superfamily, member 9##AY358128|IGSF9|57549|immunoglobulin superfamily, member 9	0.0	
chr12	100742613	100742712	reg1029367.p1	3.974	+	TSC_hg19_v1_chr12_+_100661204 AK292980 BC063798 NM_017988	-81287	+	TSC_hg19_v1_chr12_+_100661170 AK125091	-81482	+	TSC_hg19_v1_chr12_+_100661023 AK000936 BC011525	-81662	+	AK128319 NM_001145288 NM_139319 AJ459241	8262	+	AK312959 NM_001206977 NM_001206978 NM_001206979 NM_005123 TSC_hg19_v1_chr12_+_100867643 U68233 BC130573 BC144183 BC144184 BC144187	124959	+	TSC_hg19_v1_chr12_+_100867741 BC035654	125083	+	AK292980|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##BC063798|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##NM_017988|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##AK125091|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##AK000936|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##BC011525|SCYL2|55681|SCY1-like 2 (S. cerevisiae)##AK128319|SLC17A8|246213|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8##NM_001145288|SLC17A8|246213|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8##NM_139319|SLC17A8|246213|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8##AJ459241|SLC17A8|246213|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8##AK312959|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206977|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206978|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_001206979|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##NM_005123|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##U68233|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC130573|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC144183|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC144184|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC144187|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4##BC035654|NR1H4|9971|nuclear receptor subfamily 1, group H, member 4	0.930771	CTCF.p2:-21:0.931
chr14	50426904	50427077	reg1039014.p1	3.974	+	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-66584	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-67157	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	-67172	+	AK091232 AX746864 NM_001012706	47247	-	AF390030 NM_001014830	132370	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	156280	-	AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6##AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D	0.0	
chr15	100450261	100450379	reg1040508.p1	3.974	+	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-176686	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-176716	-	TSC_hg19_v1_chr15_-_100273591 BC084545 AK124852	-176754	-	AB527357 AJ315735 NM_139057	431823	-	BC034500 BC034970 NM_178842	634577	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	692089	-	BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC084545|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK124852|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)	0.73556	CTCF.p2:20:0.736
chr15	22743942	22744031	reg1034951.p1	3.974	+	AK097517 NM_001001413	-7741	+	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	-270764	-	BC136597 BC136598 NM_001005241 DQ786223	-361541	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	89484	+	TSC_hg19_v1_chr15_+_22892666 AY763577	148613	+	NM_014608 TSC_hg19_v1_chr15_+_22892685	148703	+	AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AY763577|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1##NM_014608|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	0.79594	CTCF.p2:-5:0.796
chr21	26829181	26829319	reg1033571.p1	3.974	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-1028182	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-4458477	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-4458560	+	TSC_hg19_v1_chr21_+_26934442 AF402776	105222	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	150565	-	NM_021219 TSC_hg19_v1_chr21_+_27011719	182403	+	AK124194|FLJ42200|400860|FLJ42200 protein##BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##NM_021219|JAM2|58494|junctional adhesion molecule 2	0.0	
chr2	241165388	241165524	reg1033045.p2	3.974	+	NM_148961	-85384	-	TSC_hg19_v1_chr2_-_241075721 AF487338 BC033955 NM_001163424 AF453951 NM_138336 AB463905	-89723	-	NM_173351	-179968	-	TSC_hg19_v1_chr2_+_241375079 BC051279 NM_002081 X54232	209624	+	TSC_hg19_v1_chr2_+_241375207 BC027997	209755	+	TSC_hg19_v1_chr2_+_241375269 AK223516 BC045712	209809	+	NM_148961|OTOS|150677|otospiralin##AF487338|MYEOV2|150678|myeloma overexpressed 2##BC033955|MYEOV2|150678|myeloma overexpressed 2##NM_001163424|MYEOV2|150678|myeloma overexpressed 2##AF453951|MYEOV2|150678|myeloma overexpressed 2##NM_138336|MYEOV2|150678|myeloma overexpressed 2##NM_173351|OR6B3|150681|olfactory receptor, family 6, subfamily B, member 3##BC051279|GPC1|2817|glypican 1##NM_002081|GPC1|2817|glypican 1##X54232|GPC1|2817|glypican 1##BC027997|GPC1|2817|glypican 1##AK223516|GPC1|2817|glypican 1##BC045712|GPC1|2817|glypican 1	0.99259	CTCF.p2:-5:0.993
chr22	42345570	42345750	reg1035822.p2	3.974	+	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	-2537	-	EU035297 NM_001110215	-9438	-	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	-22861	-	TSC_hg19_v1_chr22_+_42372810 NM_019106 NM_145733 AK290037 AK299919 AL833942 BC111779 CR456572 AF285107 AF285108 AF285109	27248	+	AK128138 NM_152613 TSC_hg19_v1_chr22_+_42394808 AK129656 AK296138 BC022546 BC022549 BC038789 AK310980 CR456400 AB463345 CU012958 CU013246	49115	+	AB528190 CU013127 CU013415 DQ891874 DQ895062 CR456527 M38083 BC000095 TSC_hg19_v1_chr22_-_42466570	120775	-	CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_019106|SEPT3|55964|septin 3##NM_145733|SEPT3|55964|septin 3##AK290037|SEPT3|55964|septin 3##AK299919|SEPT3|55964|septin 3##AL833942|SEPT3|55964|septin 3##BC111779|SEPT3|55964|septin 3##CR456572|SEPT3|55964|septin 3##AF285107|SEPT3|55964|septin 3##AF285108|SEPT3|55964|septin 3##AF285109|SEPT3|55964|septin 3##AK128138|WBP2NL|164684|WBP2 N-terminal like##NM_152613|WBP2NL|164684|WBP2 N-terminal like##AK129656|WBP2NL|164684|WBP2 N-terminal like##AK296138|WBP2NL|164684|WBP2 N-terminal like##BC022546|WBP2NL|164684|WBP2 N-terminal like##BC022549|WBP2NL|164684|WBP2 N-terminal like##CR456400|WBP2NL|164684|WBP2 N-terminal like##CU013127|NAGA|4668|N-acetylgalactosaminidase, alpha-##CU013415|NAGA|4668|N-acetylgalactosaminidase, alpha-##DQ891874|NAGA|4668|N-acetylgalactosaminidase, alpha-##DQ895062|NAGA|4668|N-acetylgalactosaminidase, alpha-##CR456527|NAGA|4668|N-acetylgalactosaminidase, alpha-##M38083|NAGA|4668|N-acetylgalactosaminidase, alpha-##BC000095|NAGA|4668|N-acetylgalactosaminidase, alpha-	0.034559	
chr6	106545749	106545845	reg1030164.p1	3.974	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	-11562	+	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	-11601	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-694802	-	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	1007	+	BC002699 TSC_hg19_v1_chr6_-_106773313	227511	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	227735	-	AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	0.0	
chr8	117460357	117460527	reg1008715.p2	3.974	+	TSC_hg19_v1_chr8_-_116681365 AF183810	-779107	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	-779277	-	TSC_hg19_v1_chr8_-_116680208 AK304046	-780222	-	TSC_hg19_v1_chr8_-_117768041 BC000386 BT019594 CR456906 CU674186 AK222620 U54559 BC090880	307595	-	AK222520 TSC_hg19_v1_chr8_-_117768063 AK296162 NM_003756	307629	-	BC005955 BC022441 NM_032334 TSC_hg19_v1_chr8_+_117778752	318309	+	AF183810|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC000386|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BT019594|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##CR456906|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222620|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##U54559|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC090880|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK222520|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##AK296162|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##NM_003756|EIF3H|8667|eukaryotic translation initiation factor 3, subunit H##BC005955|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##BC022441|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)##NM_032334|UTP23|84294|UTP23, small subunit (SSU) processome component, homolog (yeast)	0.0	
chr8	137196215	137196319	reg1035973.p1	3.974	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-726066	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-726609	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1470993	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2312839	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2729977	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3519015	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.016594	
chr14	82091795	82091929	reg1034276.p1	3.973	+	TSC_hg19_v1_chr14_-_82000198 NM_001244984 NM_005065	-91635	-	TSC_hg19_v1_chr14_-_82000165 AB020335 AY358651 BC054336 AF052059 AK075511	-91714	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	-227036	-	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	3904611	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	3904679	+	TSC_hg19_v1_chr14_+_85999692 AK297248	3907723	+	NM_001244984|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##NM_005065|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AB020335|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AY358651|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##BC054336|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AF052059|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##AK075511|SEL1L|6400|sel-1 suppressor of lin-12-like (C. elegans)##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2	0.948036	CTCF.p2:18:0.948
chr15	40345563	40345700	reg1033990.p1	3.973	+	TSC_hg19_v1_chr15_+_40331506 AK127696	-14153	+	AB451391 CU690086 TSC_hg19_v1_chr15_-_40331370 X73459 BC071716 U07857 BC100031 BC035495 BC051006 AB061546 NM_003134	-14279	-	TSC_hg19_v1_chr15_+_40294764 AK074361	-50835	+	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	52655	-	BC104983 BC104985 BC069328 BC069505 NM_033503 AK024472	52979	-	TSC_hg19_v1_chr15_-_40401076 BC060783 BC070043 NM_001003940	55464	-	AK127696|LOC100131089|100131089|uncharacterized LOC100131089##AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AK074361|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor##BC104983|BMF|90427|Bcl2 modifying factor##BC104985|BMF|90427|Bcl2 modifying factor##BC069328|BMF|90427|Bcl2 modifying factor##BC069505|BMF|90427|Bcl2 modifying factor##NM_033503|BMF|90427|Bcl2 modifying factor##AK024472|BMF|90427|Bcl2 modifying factor##BC060783|BMF|90427|Bcl2 modifying factor##BC070043|BMF|90427|Bcl2 modifying factor##NM_001003940|BMF|90427|Bcl2 modifying factor	0.467296	CTCF.p2:-41:0.467
chr16	31470376	31470469	reg1035497.p2	3.973	+	TSC_hg19_v1_chr16_+_31470117 AK294897 AY217348 NM_001105247 NM_024742 BC014945	-167	+	TSC_hg19_v1_chr16_+_31469624 AK295790	-865	+	AK096248 NM_001136509	-16076	-	TSC_hg19_v1_chr16_+_31470830 AK024430	404	+	TSC_hg19_v1_chr16_-_31470650 AK125571	438	-	TSC_hg19_v1_chr16_+_31483494 AK313327 NM_001042454 AK122975 AB464307 BC017288 NM_001164719	12883	+	AK294897|ARMC5|79798|armadillo repeat containing 5##AY217348|ARMC5|79798|armadillo repeat containing 5##NM_001105247|ARMC5|79798|armadillo repeat containing 5##NM_024742|ARMC5|79798|armadillo repeat containing 5##BC014945|ARMC5|79798|armadillo repeat containing 5##AK295790|ARMC5|79798|armadillo repeat containing 5##AK096248|ZNF843|283933|zinc finger protein 843##NM_001136509|ZNF843|283933|zinc finger protein 843##AK024430|ARMC5|79798|armadillo repeat containing 5##AK313327|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##NM_001042454|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##AK122975|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##BC017288|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##NM_001164719|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1	0.612488	CTCF.p2:4:0.612
chr16	5142518	5142605	reg1010768.p2	3.973	+	NM_019109 TSC_hg19_v1_chr16_+_5121825 AK075373 BC031095 AB019038 BC004402 AK311475 CU678708 DQ895010 EU176309	-20731	+	TSC_hg19_v1_chr16_-_5116030 BC033681 AY358483 NM_001098514 NM_152459	-26474	-	TSC_hg19_v1_chr16_-_5115951 AK075242	-26606	-	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	5207	-	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	926664	+	TSC_hg19_v1_chr16_+_6533765 BC033885	1391214	+	NM_019109|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK075373|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC031095|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AB019038|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC004402|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK311475|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##DQ895010|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##EU176309|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC033681|C16orf89|146556|chromosome 16 open reading frame 89##AY358483|C16orf89|146556|chromosome 16 open reading frame 89##NM_001098514|C16orf89|146556|chromosome 16 open reading frame 89##NM_152459|C16orf89|146556|chromosome 16 open reading frame 89##AK075242|C16orf89|146556|chromosome 16 open reading frame 89##BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	0.989712	
chr16	73323271	73323452	reg1028758.p2	3.973	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-230775	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-241140	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-331656	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	1007332	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	1007410	+	TSC_hg19_v1_chr16_-_74401811 AK124154	1078451	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.0	
chr17	64161529	64161710	reg1005725.p1	3.973	+	BC029524 NM_001037325	-338959	-	CR933657 TSC_hg19_v1_chr17_-_63557767	-603851	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	-603940	-	BC131805 TSC_hg19_v1_chr17_-_64188195 BC037991 NM_145036 AK299075 AK096929 NM_001199165	26562	-	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	63906	-	TSC_hg19_v1_chr17_+_64298733 BC053321	137131	+	BC029524|CEP112|201134|centrosomal protein 112kDa##NM_001037325|CEP112|201134|centrosomal protein 112kDa##CR933657|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##BC131805|CEP112|201134|centrosomal protein 112kDa##BC037991|CEP112|201134|centrosomal protein 112kDa##NM_145036|CEP112|201134|centrosomal protein 112kDa##AK299075|CEP112|201134|centrosomal protein 112kDa##AK096929|CEP112|201134|centrosomal protein 112kDa##NM_001199165|CEP112|201134|centrosomal protein 112kDa##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC053321|PRKCA|5578|protein kinase C, alpha	0.0	
chr5	75698589	75698770	reg1021502.p1	3.973	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-319408	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-685419	-	BC101325 AK093098 AX747921 BC101326 BC101327 BC101328 NM_152408	-690417	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	437	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	220466	-	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	313277	+	AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101325|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK093098|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101326|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101327|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC101328|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_152408|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor	0.0	
chr1	36851941	36852114	reg1034783.p1	3.972	+	TSC_hg19_v1_chr1_-_36851517 AK075048	-504	-	AL834137 NM_032017 BC008344 TSC_hg19_v1_chr1_-_36851499 BC007835 AY198395	-536	-	TSC_hg19_v1_chr1_-_36817157 AK023810	-34853	-	AF394685 TSC_hg19_v1_chr1_-_36863508 AF166092 BC007623 NM_032881	11466	-	AB079075 AK098541 BC018069 NM_145047 NM_206837	64000	-	TSC_hg19_v1_chr1_-_36929984 AB049946 AB209905 AK021626 BC031336 AF265439 AK315441 AK302633 NM_031280	77932	-	AK075048|STK40|83931|serine/threonine kinase 40##AL834137|STK40|83931|serine/threonine kinase 40##NM_032017|STK40|83931|serine/threonine kinase 40##BC008344|STK40|83931|serine/threonine kinase 40##BC007835|STK40|83931|serine/threonine kinase 40##AY198395|STK40|83931|serine/threonine kinase 40##AF394685|LSM10|84967|LSM10, U7 small nuclear RNA associated##AF166092|LSM10|84967|LSM10, U7 small nuclear RNA associated##BC007623|LSM10|84967|LSM10, U7 small nuclear RNA associated##NM_032881|LSM10|84967|LSM10, U7 small nuclear RNA associated##AB079075|OSCP1|127700|organic solute carrier partner 1##AK098541|OSCP1|127700|organic solute carrier partner 1##BC018069|OSCP1|127700|organic solute carrier partner 1##NM_145047|OSCP1|127700|organic solute carrier partner 1##NM_206837|OSCP1|127700|organic solute carrier partner 1##AB049946|MRPS15|64960|mitochondrial ribosomal protein S15##AB209905|MRPS15|64960|mitochondrial ribosomal protein S15##AK021626|MRPS15|64960|mitochondrial ribosomal protein S15##BC031336|MRPS15|64960|mitochondrial ribosomal protein S15##AF265439|MRPS15|64960|mitochondrial ribosomal protein S15##AK315441|MRPS15|64960|mitochondrial ribosomal protein S15##AK302633|MRPS15|64960|mitochondrial ribosomal protein S15##NM_031280|MRPS15|64960|mitochondrial ribosomal protein S15	0.0	
chr14	91790309	91790490	reg1005981.p2	3.972	+	BC098567 NM_003485	-70205	-	BC128536 NM_001177676	-79548	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-209372	+	TSC_hg19_v1_chr14_-_91884159 AF070587	93749	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	93776	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	186101	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.0	
chr16	2892595	2892691	reg1035145.p1	3.972	+	NM_145252 AY359021 JN411265 BC009722 AB528168 AM392915 AM393869 EF067313 AK311810	-12405	+	BC074999 BC075000 TSC_hg19_v1_chr16_+_2867242 AY359034 AF058300 AB031329 AB031330	-25397	+	NM_006799 NM_144956 NM_144957 AB031331 TSC_hg19_v1_chr16_+_2867207	-25458	+	CU679465 AB010779 AF321182 BC009726 AY358396 NM_022119	15494	-	NM_001142499 NM_001142500 NM_138439 TSC_hg19_v1_chr16_+_2933215 BC014089	40613	+	TSC_hg19_v1_chr16_+_2961983 BC028572 NM_020912 NM_032296	69321	+	NM_145252|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AY359021|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##JN411265|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC009722|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM392915|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM393869|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##EF067313|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AK311810|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC074999|PRSS21|10942|protease, serine, 21 (testisin)##BC075000|PRSS21|10942|protease, serine, 21 (testisin)##AY359034|PRSS21|10942|protease, serine, 21 (testisin)##AF058300|PRSS21|10942|protease, serine, 21 (testisin)##AB031329|PRSS21|10942|protease, serine, 21 (testisin)##AB031330|PRSS21|10942|protease, serine, 21 (testisin)##NM_006799|PRSS21|10942|protease, serine, 21 (testisin)##NM_144956|PRSS21|10942|protease, serine, 21 (testisin)##NM_144957|PRSS21|10942|protease, serine, 21 (testisin)##AB031331|PRSS21|10942|protease, serine, 21 (testisin)##AB010779|PRSS22|64063|protease, serine, 22##AF321182|PRSS22|64063|protease, serine, 22##BC009726|PRSS22|64063|protease, serine, 22##AY358396|PRSS22|64063|protease, serine, 22##NM_022119|PRSS22|64063|protease, serine, 22##NM_001142499|FLYWCH2|114984|FLYWCH family member 2##NM_001142500|FLYWCH2|114984|FLYWCH family member 2##NM_138439|FLYWCH2|114984|FLYWCH family member 2##BC014089|FLYWCH2|114984|FLYWCH family member 2##BC028572|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_020912|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_032296|FLYWCH1|84256|FLYWCH-type zinc finger 1	0.987551	CTCF.p2:-2:0.988
chr17	7255787	7255881	reg1033503.p2	3.972	+	TSC_hg19_v1_chr17_+_7255480 AK056227 AY646650	-292	+	BC103744 NM_001002914	-627	+	NM_014716 TSC_hg19_v1_chr17_+_7239850 D30758 BC018543	-15975	+	BC040900 AY358218 BC107110 NM_198154	2641	+	NM_001251902 NM_003985 AK311063 AK225403 AK310684 U43408	28516	+	AK124006 AF289602 BC028080 TSC_hg19_v1_chr17_-_7297842 AK098229 AK075188 AK314643 BC093026 AF159442	42023	-	AK056227|KCTD11|147040|potassium channel tetramerisation domain containing 11##AY646650|KCTD11|147040|potassium channel tetramerisation domain containing 11##BC103744|KCTD11|147040|potassium channel tetramerisation domain containing 11##NM_001002914|KCTD11|147040|potassium channel tetramerisation domain containing 11##NM_014716|ACAP1|9744|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1##D30758|ACAP1|9744|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1##BC018543|ACAP1|9744|ArfGAP with coiled-coil, ankyrin repeat and PH domains 1##BC040900|TMEM95|339168|transmembrane protein 95##AY358218|TMEM95|339168|transmembrane protein 95##BC107110|TMEM95|339168|transmembrane protein 95##NM_198154|TMEM95|339168|transmembrane protein 95##NM_001251902|TNK1|8711|tyrosine kinase, non-receptor, 1##NM_003985|TNK1|8711|tyrosine kinase, non-receptor, 1##AK311063|TNK1|8711|tyrosine kinase, non-receptor, 1##AK225403|TNK1|8711|tyrosine kinase, non-receptor, 1##AK310684|TNK1|8711|tyrosine kinase, non-receptor, 1##U43408|TNK1|8711|tyrosine kinase, non-receptor, 1##AK124006|PLSCR3|57048|phospholipid scramblase 3##AF289602|PLSCR3|57048|phospholipid scramblase 3##BC028080|PLSCR3|57048|phospholipid scramblase 3##AK098229|PLSCR3|57048|phospholipid scramblase 3##AK075188|PLSCR3|57048|phospholipid scramblase 3##AK314643|PLSCR3|57048|phospholipid scramblase 3##BC093026|PLSCR3|57048|phospholipid scramblase 3##AF159442|PLSCR3|57048|phospholipid scramblase 3	0.594359	CTCF.p2:-19:0.579
chr17	73687768	73687883	reg1033709.p2	3.972	+	NM_013260 TSC_hg19_v1_chr17_+_73663441 AK095265 AK298060 BC030233 AY082382 BC007592 AF119664 BC063793 AK002202 AK310177 BC011724 AB464187 AF087869 CU675719 EU446793 BC013409 AK023157	-24392	+	BC063440 EF560729 TSC_hg19_v1_chr17_-_73663235 BC016911 AK075084 AK304168 AB042823 AB042824 AB042825 NM_001003715 NM_001003716 NM_004259	-24577	-	BC062771 NM_001162997 AK131023	-45144	+	NM_000213 NM_001005731 X53587 TSC_hg19_v1_chr17_+_73717539	29706	+	TSC_hg19_v1_chr17_+_73717581 X51841 BC126411 BC143738 BC143742 AK304792 AK310952	29748	+	BC118916 TSC_hg19_v1_chr17_+_73717603 AB208913	29776	+	NM_013260|SAP30BP|29115|SAP30 binding protein##AK095265|SAP30BP|29115|SAP30 binding protein##AK298060|SAP30BP|29115|SAP30 binding protein##BC030233|SAP30BP|29115|SAP30 binding protein##AY082382|SAP30BP|29115|SAP30 binding protein##BC007592|SAP30BP|29115|SAP30 binding protein##AF119664|SAP30BP|29115|SAP30 binding protein##BC063793|SAP30BP|29115|SAP30 binding protein##AK002202|SAP30BP|29115|SAP30 binding protein##AK310177|SAP30BP|29115|SAP30 binding protein##BC011724|SAP30BP|29115|SAP30 binding protein##AF087869|SAP30BP|29115|SAP30 binding protein##EU446793|SAP30BP|29115|SAP30 binding protein##BC013409|SAP30BP|29115|SAP30 binding protein##AK023157|SAP30BP|29115|SAP30 binding protein##BC063440|RECQL5|9400|RecQ protein-like 5##EF560729|RECQL5|9400|RecQ protein-like 5##BC016911|RECQL5|9400|RecQ protein-like 5##AK075084|RECQL5|9400|RecQ protein-like 5##AK304168|RECQL5|9400|RecQ protein-like 5##AB042823|RECQL5|9400|RecQ protein-like 5##AB042824|RECQL5|9400|RecQ protein-like 5##AB042825|RECQL5|9400|RecQ protein-like 5##NM_001003715|RECQL5|9400|RecQ protein-like 5##NM_001003716|RECQL5|9400|RecQ protein-like 5##NM_004259|RECQL5|9400|RecQ protein-like 5##BC062771|C17orf110|100130933|chromosome 17 open reading frame 110##NM_001162997|C17orf110|100130933|chromosome 17 open reading frame 110##AK131023|C17orf110|100130933|chromosome 17 open reading frame 110##NM_000213|ITGB4|3691|integrin, beta 4##NM_001005731|ITGB4|3691|integrin, beta 4##X53587|ITGB4|3691|integrin, beta 4##X51841|ITGB4|3691|integrin, beta 4##BC126411|ITGB4|3691|integrin, beta 4##BC143738|ITGB4|3691|integrin, beta 4##BC143742|ITGB4|3691|integrin, beta 4##AK304792|ITGB4|3691|integrin, beta 4##AK310952|ITGB4|3691|integrin, beta 4##BC118916|ITGB4|3691|integrin, beta 4##AB208913|ITGB4|3691|integrin, beta 4	0.0	
chr19	38864958	38865127	reg1033868.p1	3.972	+	NM_021185 BC033852 AK128220 BC060889 BC094785 AL133023	-38529	+	AK022344 TSC_hg19_v1_chr19_+_38810861	-54235	+	TSC_hg19_v1_chr19_+_38810572 BC004367 DQ893422 DQ896740 CU678688	-54476	+	AK301771 NM_002812	144	+	TSC_hg19_v1_chr19_+_38865427 AK304486 BC001164 BC065006 D38047 AB464081 CU674590 BT019688 AK308809	494	+	AF538037 AF538035 AF538036 BC035008 NM_152657 AK057356	13626	-	NM_021185|CATSPERG|57828|cation channel, sperm-associated, gamma##BC033852|CATSPERG|57828|cation channel, sperm-associated, gamma##AK128220|CATSPERG|57828|cation channel, sperm-associated, gamma##BC060889|CATSPERG|57828|cation channel, sperm-associated, gamma##BC094785|CATSPERG|57828|cation channel, sperm-associated, gamma##AL133023|CATSPERG|57828|cation channel, sperm-associated, gamma##AK022344|KCNK6|9424|potassium channel, subfamily K, member 6##BC004367|KCNK6|9424|potassium channel, subfamily K, member 6##DQ893422|KCNK6|9424|potassium channel, subfamily K, member 6##DQ896740|KCNK6|9424|potassium channel, subfamily K, member 6##AK301771|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##NM_002812|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##AK304486|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##BC001164|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##BC065006|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##D38047|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##BT019688|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##AK308809|PSMD8|5714|proteasome (prosome, macropain) 26S subunit, non-ATPase, 8##AF538037|GGN|199720|gametogenetin##AF538035|GGN|199720|gametogenetin##AF538036|GGN|199720|gametogenetin##BC035008|GGN|199720|gametogenetin##NM_152657|GGN|199720|gametogenetin##AK057356|GGN|199720|gametogenetin	0.0	
chr19	9419980	9420160	reg1035065.p1	3.972	+	BC109267 BC109268 NM_198535 EU446770	-4276	-	BC146920 NM_001079935	-58408	+	BC137147 BC137162 NM_001005191	-94524	-	NM_001202406 NM_001202407 NM_001202408 NM_001202409 NM_001202410 NM_001202411 NM_032497	14377	+	AK027700 AK308517 AK309952 AK310117 AK092348 AX747491 TSC_hg19_v1_chr19_+_9434880 AK056489 AK310020 AK310781 AK298169 NM_001172650 NM_001202412 BC006436 AL389938 BC034489	14865	+	NM_001202425 U37251	15315	+	BC109267|ZNF699|374879|zinc finger protein 699##BC109268|ZNF699|374879|zinc finger protein 699##NM_198535|ZNF699|374879|zinc finger protein 699##EU446770|ZNF266|10781|zinc finger protein 266##BC146920|OR7E24|26648|olfactory receptor, family 7, subfamily E, member 24##NM_001079935|OR7E24|26648|olfactory receptor, family 7, subfamily E, member 24##BC137147|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4##BC137162|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4##NM_001005191|OR7D4|125958|olfactory receptor, family 7, subfamily D, member 4##NM_001202406|ZNF559|84527|zinc finger protein 559##NM_001202407|ZNF559|84527|zinc finger protein 559##NM_001202408|ZNF559|84527|zinc finger protein 559##NM_001202409|ZNF559|84527|zinc finger protein 559##NM_001202410|ZNF559|84527|zinc finger protein 559##NM_001202411|ZNF559|84527|zinc finger protein 559##NM_032497|ZNF559|84527|zinc finger protein 559##AK027700|ZNF559|84527|zinc finger protein 559##AK308517|ZNF559|84527|zinc finger protein 559##AK309952|ZNF559|84527|zinc finger protein 559##AK310117|ZNF559|84527|zinc finger protein 559##AK092348|ZNF559|84527|zinc finger protein 559##AK056489|ZNF559|84527|zinc finger protein 559##AK310020|ZNF559|84527|zinc finger protein 559##AK310781|ZNF559|84527|zinc finger protein 559##AK298169|ZNF559|84527|zinc finger protein 559##NM_001172650|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough##NM_001202412|ZNF559|84527|zinc finger protein 559##BC006436|ZNF559|84527|zinc finger protein 559##AL389938|ZNF559|84527|zinc finger protein 559##BC034489|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough##NM_001202425|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough##U37251|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough	0.0	
chr3	122102957	122103115	reg1029899.p1	3.972	+	BC019231 BC109378 TSC_hg19_v1_chr3_-_122102079 BC054051 BC062725 NM_001017928	-959	-	NM_005213 AK291308 BC010379 X05978 CR456914	-58962	+	NM_001178065 U20760	-199856	+	NM_014367 AK026030 BC010896 BC015060 AF201944 AF107495 AF250321 TSC_hg19_v1_chr3_+_122103076 AK293994 AF191020	32	+	BC025762 NM_019069 TSC_hg19_v1_chr3_-_122134925	31881	-	S75295 TSC_hg19_v1_chr3_-_122233757 BC090864	130664	-	BC109378|CCDC58|131076|coiled-coil domain containing 58##BC054051|CCDC58|131076|coiled-coil domain containing 58##BC062725|CCDC58|131076|coiled-coil domain containing 58##NM_001017928|CCDC58|131076|coiled-coil domain containing 58##NM_005213|CSTA|1475|cystatin A (stefin A)##AK291308|CSTA|1475|cystatin A (stefin A)##BC010379|CSTA|1475|cystatin A (stefin A)##X05978|CSTA|1475|cystatin A (stefin A)##CR456914|CSTA|1475|cystatin A (stefin A)##NM_001178065|CASR|846|calcium-sensing receptor##U20760|CASR|846|calcium-sensing receptor##NM_014367|FAM162A|26355|family with sequence similarity 162, member A##AK026030|FAM162A|26355|family with sequence similarity 162, member A##BC010896|FAM162A|26355|family with sequence similarity 162, member A##BC015060|FAM162A|26355|family with sequence similarity 162, member A##AF201944|FAM162A|26355|family with sequence similarity 162, member A##AF107495|FAM162A|26355|family with sequence similarity 162, member A##AF250321|FAM162A|26355|family with sequence similarity 162, member A##AK293994|FAM162A|26355|family with sequence similarity 162, member A##AF191020|FAM162A|26355|family with sequence similarity 162, member A##BC025762|WDR5B|54554|WD repeat domain 5B##NM_019069|WDR5B|54554|WD repeat domain 5B##S75295|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC090864|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)	0.0	
chrX	111887053	111887233	reg1037309.p2	3.972	+	AK128465 NM_001004308	-560891	+	AF054568 NM_012471	-561140	-	BC034811 NM_001195577	-762019	+	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	36196	-	AB384557 AY987378 NM_001113490	179210	-	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	196919	-	AK128465|ZCCHC16|340595|zinc finger, CCHC domain containing 16##NM_001004308|ZCCHC16|340595|zinc finger, CCHC domain containing 16##AF054568|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##NM_012471|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##BC034811|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195577|LOC100329135|100329135|uncharacterized LOC100329135##BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin	0.0	
chr10	45965557	45965642	reg1039002.p1	3.971	+	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	-95902	+	TSC_hg19_v1_chr10_+_45869638 AB208946 NM_000698 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223	-95962	+	AK131555 NM_001004297	-154544	-	AK313340 BC025394 NM_001002266 AK307667	65220	-	TSC_hg19_v1_chr10_-_46090318 BC066988 NM_001002265 NM_145021	124695	-	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	202615	-	BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase##AB208946|ALOX5|240|arachidonate 5-lipoxygenase##NM_000698|ALOX5|240|arachidonate 5-lipoxygenase##AK225603|ALOX5|240|arachidonate 5-lipoxygenase##BC130332|ALOX5|240|arachidonate 5-lipoxygenase##BC132677|ALOX5|240|arachidonate 5-lipoxygenase##BC143985|ALOX5|240|arachidonate 5-lipoxygenase##BC143986|ALOX5|240|arachidonate 5-lipoxygenase##AK315223|ALOX5|240|arachidonate 5-lipoxygenase##AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##AK313340|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC025394|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002266|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK307667|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC066988|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002265|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_145021|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4	0.0	
chr11	27146539	27146645	reg1036309.p1	3.971	+	NM_003986	-84084	+	TSC_hg19_v1_chr11_+_27015837 BC026873	-130748	+	TSC_hg19_v1_chr11_+_27015673 AK310616	-130922	+	AF382034 TSC_hg19_v1_chr11_-_27384763 AY598334 CU678989 AK313358 BC008496 AK308494 NM_030771 NM_080654	238174	-	TSC_hg19_v1_chr11_-_27494323 AB209743 AF257182 BC033039 NM_018490	347712	-	AB385247 BC053907 TSC_hg19_v1_chr11_-_27528315 BC009774 AK223156 AL833601 AK002077 NM_018362	381720	-	NM_003986|BBOX1|8424|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1##BC026873|FIBIN|387758|fin bud initiation factor homolog (zebrafish)##AF382034|CCDC34|91057|coiled-coil domain containing 34##AY598334|CCDC34|91057|coiled-coil domain containing 34##AK313358|CCDC34|91057|coiled-coil domain containing 34##BC008496|CCDC34|91057|coiled-coil domain containing 34##AK308494|CCDC34|91057|coiled-coil domain containing 34##NM_030771|CCDC34|91057|coiled-coil domain containing 34##NM_080654|CCDC34|91057|coiled-coil domain containing 34##AB209743|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF257182|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC033039|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##NM_018490|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)##BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)##AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)##AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)##AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)##NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)	0.92827	CTCF.p2:26:0.928
chr14	61547461	61547578	reg1037301.p1	3.971	+	TSC_hg19_v1_chr14_+_61447962 BX648332 BC110378 BC064429 BX248072 AF070578 AK303839	-99464	+	TSC_hg19_v1_chr14_+_61447932 BC050349	-99583	+	NM_001172702 NM_153811 AF543422 TSC_hg19_v1_chr14_+_61447920	-99642	+	AB464738 TSC_hg19_v1_chr14_-_61747887	200358	-	BC101726 BC113559 TSC_hg19_v1_chr14_-_61747937	200406	-	TSC_hg19_v1_chr14_-_61747957 AK091169 AX746825	200446	-	BX648332|SLC38A6|145389|solute carrier family 38, member 6##BC110378|SLC38A6|145389|solute carrier family 38, member 6##BC064429|SLC38A6|145389|solute carrier family 38, member 6##BX248072|SLC38A6|145389|solute carrier family 38, member 6##AF070578|SLC38A6|145389|solute carrier family 38, member 6##AK303839|SLC38A6|145389|solute carrier family 38, member 6##BC050349|SLC38A6|145389|solute carrier family 38, member 6##NM_001172702|SLC38A6|145389|solute carrier family 38, member 6##NM_153811|SLC38A6|145389|solute carrier family 38, member 6##AF543422|SLC38A6|145389|solute carrier family 38, member 6##BC101726|TMEM30B|161291|transmembrane protein 30B##BC113559|TMEM30B|161291|transmembrane protein 30B##AK091169|TMEM30B|161291|transmembrane protein 30B	0.0	
chr15	32657280	32657402	reg1038383.p1	3.971	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-334598	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-494398	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-494512	-	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	250421	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	276573	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	352916	+	AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1	0.998598	CTCF.p2:-10:0.999
chr17	44418738	44418831	reg1036583.p1	3.971	+	BC040501 CR749232 NM_014834	-46288	+	AK291259 NM_001193465	-116057	-	TSC_hg19_v1_chr17_-_44270338 BC098376 NM_015443	-148475	-	BC020869 AK289590 AK315857 BC041803 BC030570 BX647266 NM_001039083 NM_001103154 NM_001113738 NM_016632	20338	-	BC040501 CR749232 NM_001006607	171291	+	BC020869 AB209344 AF208864 BX647266 NM_001113738 NM_016632	238263	-	BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_014834|LRRC37A|9884|leucine rich repeat containing 37A##AK291259|KIAA1267|284058|KIAA1267##NM_001193465|KIAA1267|284058|KIAA1267##BC098376|KIAA1267|284058|KIAA1267##NM_015443|KIAA1267|284058|KIAA1267##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AK289590|ARL17A|51326|ADP-ribosylation factor-like 17A##AK315857|ARL17A|51326|ADP-ribosylation factor-like 17A##BC041803|ARL17A|51326|ADP-ribosylation factor-like 17A##BC030570|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001039083|ARL17B|100506084|ADP-ribosylation factor-like 17B##NM_001103154|ARL17B|100506084|ADP-ribosylation factor-like 17B##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A##BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_001006607|LRRC37A2|474170|leucine rich repeat containing 37, member A2##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AB209344|ARL17A|51326|ADP-ribosylation factor-like 17A##AF208864|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A	0.023164	
chr1	77285941	77286092	reg1029811.p2	3.971	+	TSC_hg19_v1_chr1_+_77165439 D28460	-120576	+	TSC_hg19_v1_chr1_+_76540430 NM_001160011 NM_152996 AK091215 AX746855 BC059363 AK297363 AY358540 AJ507291 CU691350	-745554	+	AF403035 CU691378 BC022517 AF429968 BC036573 AK098606 NM_080868	-887971	-	TSC_hg19_v1_chr1_+_77333125 AK056241	47111	+	TSC_hg19_v1_chr1_+_77333164 AK095758 AK300902 AK295019 BC001201 NM_030965	47155	+	Y07596 CU676676 AF022913 BC020737 TSC_hg19_v1_chr1_-_77685112 BC026186 AK304340 AK313015 BX648473 NM_005482	399087	-	D28460|TPI1|7167|triosephosphate isomerase 1##NM_001160011|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##NM_152996|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK091215|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##BC059363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AK297363|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AY358540|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AJ507291|ST6GALNAC3|256435|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3##AF403035|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC022517|ASB17|127247|ankyrin repeat and SOCS box containing 17##AF429968|ASB17|127247|ankyrin repeat and SOCS box containing 17##BC036573|ASB17|127247|ankyrin repeat and SOCS box containing 17##AK098606|ASB17|127247|ankyrin repeat and SOCS box containing 17##NM_080868|ASB17|127247|ankyrin repeat and SOCS box containing 17##AK056241|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK095758|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK300902|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##AK295019|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##BC001201|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##NM_030965|ST6GALNAC5|81849|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5##Y07596|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AF022913|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##BC020737|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##BC026186|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AK304340|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##AK313015|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##BX648473|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K##NM_005482|PIGK|10026|phosphatidylinositol glycan anchor biosynthesis, class K	0.0	
chr19	12444282	12444463	reg1036409.p3	3.971	+	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	-38720	-	TSC_hg19_v1_chr19_+_12305871 AK093188 AX721123	-138466	+	AK023304 TSC_hg19_v1_chr19_+_12305836	-138539	+	AK313755 BC022523 AK092116 AX747362 NM_145276	112	-	AK024418 AK295923 NM_030824	32088	-	TSC_hg19_v1_chr19_-_12512035 BC057831 NM_001080821	67682	-	BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44##AK023304|LOC100289333|100289333|uncharacterized LOC100289333##AK313755|ZNF563|147837|zinc finger protein 563##BC022523|ZNF563|147837|zinc finger protein 563##AK092116|ZNF563|147837|zinc finger protein 563##NM_145276|ZNF563|147837|zinc finger protein 563##AK024418|ZNF442|79973|zinc finger protein 442##AK295923|ZNF442|79973|zinc finger protein 442##NM_030824|ZNF442|79973|zinc finger protein 442##NM_001080821|ZNF799|90576|zinc finger protein 799	0.0	
chr22	43285486	43285604	reg1026334.p2	3.971	+	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-32190	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	-32275	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	-32334	-	BC008037 NM_007229	57501	-	AL136845 NM_001184971	70341	-	TSC_hg19_v1_chr22_-_43411136 AF128536	125594	-	NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	0.0	
chr3	149375741	149375901	reg1023948.p1	3.971	+	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	-86	-	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-183332	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-183419	+	AK022036 NM_001168278	45238	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	94418	-	TSC_hg19_v1_chr3_-_149470277 AF059618 BC001228 BC022206 AF125096 BC093077 NM_016094	94449	-	AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2##AF059618|COMMD2|51122|COMM domain containing 2##BC001228|COMMD2|51122|COMM domain containing 2##BC022206|COMMD2|51122|COMM domain containing 2##AF125096|COMMD2|51122|COMM domain containing 2##BC093077|COMMD2|51122|COMM domain containing 2##NM_016094|COMMD2|51122|COMM domain containing 2	0.0	
chr5	157010154	157010284	reg1034633.p2	3.971	+	AF311317 AF326918 TSC_hg19_v1_chr5_-_157002784 Y13786 AK091464 AK308182 AX747000 NM_033274	-7414	-	AB462931 TSC_hg19_v1_chr5_-_157002728	-7503	-	TSC_hg19_v1_chr5_+_156887210 AK026158 AK308830 AK309242	-122949	+	AB527685 TSC_hg19_v1_chr5_-_157079170	68909	-	AB022083 AB022441 AK308329 AK225861 BC033492 NM_007017 NM_178424	69180	-	BC035142 AK055284 TSC_hg19_v1_chr5_-_157098473 AK302162	88246	-	AF311317|ADAM19|8728|ADAM metallopeptidase domain 19##AF326918|ADAM19|8728|ADAM metallopeptidase domain 19##Y13786|ADAM19|8728|ADAM metallopeptidase domain 19##AK091464|ADAM19|8728|ADAM metallopeptidase domain 19##AK308182|ADAM19|8728|ADAM metallopeptidase domain 19##NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19##AK026158|NIPAL4|348938|NIPA-like domain containing 4##AK308830|NIPAL4|348938|NIPA-like domain containing 4##AK309242|NIPAL4|348938|NIPA-like domain containing 4##AB022083|SOX30|11063|SRY (sex determining region Y)-box 30##AB022441|SOX30|11063|SRY (sex determining region Y)-box 30##AK308329|SOX30|11063|SRY (sex determining region Y)-box 30##BC033492|SOX30|11063|SRY (sex determining region Y)-box 30##NM_007017|SOX30|11063|SRY (sex determining region Y)-box 30##NM_178424|SOX30|11063|SRY (sex determining region Y)-box 30##AK302162|SOX30|11063|SRY (sex determining region Y)-box 30	0.37168	CTCF.p2:8:0.372
chr6	12311478	12311599	reg1033335.p1	3.971	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	-20945	+	NM_002114	-298815	+	NM_001143948 NM_032744	-532259	-	TSC_hg19_v1_chr6_+_12514301 D28417	202764	+	AK295263 TSC_hg19_v1_chr6_+_12716998	405405	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	405505	+	NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1	0.013635	
chr7	52985806	52985926	reg1033266.p1	3.971	+	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	-1601380	-	AB385366 TSC_hg19_v1_chr7_-_51384416 BC136441 BC144099	-1601486	-	TSC_hg19_v1_chr7_-_50861150 NM_001001555	-2124712	-	NM_182595	117482	+	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	1624216	+	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	1841013	-	BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##BC136441|COBL|23242|cordon-bleu homolog (mouse)##BC144099|COBL|23242|cordon-bleu homolog (mouse)##NM_001001555|GRB10|2887|growth factor receptor-bound protein 10##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12##NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit	0.851801	CTCF.p2:-3:0.852
chrX	13031793	13031892	reg1036776.p1	3.971	+	TSC_hg19_v1_chrX_+_12994293 BC104464 BC104465 BT007090 X02493	-37499	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	-38602	+	AK314240 NM_138636 AF246971 AY358296 BC101074 BC101075 BC101076 BC101077 AF245703	-107085	+	BX647580 AK313776 AF494345 BX648111 BX648919 NM_174901	30976	-	AB050195 TSC_hg19_v1_chrX_-_13338140 BC137186 BC137187	306296	-	AK302365 NM_001135995	306675	-	BC104464|TMSB4X|7114|thymosin beta 4, X-linked##BC104465|TMSB4X|7114|thymosin beta 4, X-linked##BT007090|TMSB4X|7114|thymosin beta 4, X-linked##X02493|TMSB4X|7114|thymosin beta 4, X-linked##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked##AK314240|TLR8|51311|toll-like receptor 8##NM_138636|TLR8|51311|toll-like receptor 8##AF246971|TLR8|51311|toll-like receptor 8##AY358296|TLR8|51311|toll-like receptor 8##BC101074|TLR8|51311|toll-like receptor 8##BC101075|TLR8|51311|toll-like receptor 8##BC101076|TLR8|51311|toll-like receptor 8##BC101077|TLR8|51311|toll-like receptor 8##AF245703|TLR8|51311|toll-like receptor 8##BX647580|FAM9C|171484|family with sequence similarity 9, member C##AK313776|FAM9C|171484|family with sequence similarity 9, member C##AF494345|FAM9C|171484|family with sequence similarity 9, member C##BX648111|FAM9C|171484|family with sequence similarity 9, member C##BX648919|FAM9C|171484|family with sequence similarity 9, member C##NM_174901|FAM9C|171484|family with sequence similarity 9, member C##AB050195|ATXN3L|92552|ataxin 3-like##BC137186|ATXN3L|92552|ataxin 3-like##BC137187|ATXN3L|92552|ataxin 3-like##AK302365|ATXN3L|92552|ataxin 3-like##NM_001135995|ATXN3L|92552|ataxin 3-like	0.0	
chr10	3852697	3852871	reg1032873.p2	3.970	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-25275	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-25473	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-637779	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1015634	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1152730	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1152839	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr15	75361968	75362148	reg1028529.p1	3.970	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-46077	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-46130	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-74151	+	AK128205 TSC_hg19_v1_chr15_+_75491259	129188	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	132154	+	BC110367 TSC_hg19_v1_chr15_+_75494233	132175	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chr16	74069856	74069964	reg1036586.p1	3.970	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-977324	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-987689	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-1078205	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	260783	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	260861	+	TSC_hg19_v1_chr16_-_74401811 AK124154	331902	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.0	
chr16	89162286	89162359	reg1037746.p2	3.970	+	TSC_hg19_v1_chr16_+_89160285 BC028399 AK290963 BC064609 BC072391 AK075499	-2015	+	NM_001127214 NM_001243279 NM_174917 TSC_hg19_v1_chr16_+_89160259	-2085	+	TSC_hg19_v1_chr16_-_89119364 AK055272	-42953	-	TSC_hg19_v1_chr16_+_89213949 AK090408	51624	+	TSC_hg19_v1_chr16_+_89238171 D83542 NM_004933 AK308596 AK308631 BC008951 DQ893277 DQ896608	75877	+	NM_001242757	104206	-	BC028399|ACSF3|197322|acyl-CoA synthetase family member 3##AK290963|ACSF3|197322|acyl-CoA synthetase family member 3##BC064609|ACSF3|197322|acyl-CoA synthetase family member 3##BC072391|ACSF3|197322|acyl-CoA synthetase family member 3##AK075499|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001127214|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001243279|ACSF3|197322|acyl-CoA synthetase family member 3##NM_174917|ACSF3|197322|acyl-CoA synthetase family member 3##D83542|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##NM_004933|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##AK308631|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##BC008951|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##DQ893277|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##DQ896608|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##NM_001242757|SLC22A31|146429|solute carrier family 22, member 31	0.0	
chr19	50398809	50398908	reg1026960.p2	3.970	+	TSC_hg19_v1_chr19_+_50381392 AK090606 AX746531	-17400	+	NM_001168222 NM_024682 TSC_hg19_v1_chr19_+_50380945 BC003516 AK022230 AK300007 AK309412 AB449903 AB590884 CU678472	-18009	+	BC016043 BC007416 AK226004 BC051844 TSC_hg19_v1_chr19_-_50380601 BC015562 NM_032375 AK123687 NM_001098633 NM_001098632	-18311	-	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	1295	-	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	14244	-	NM_012068 AK290592	33130	+	AK090606|TBC1D17|79735|TBC1 domain family, member 17##NM_001168222|TBC1D17|79735|TBC1 domain family, member 17##NM_024682|TBC1D17|79735|TBC1 domain family, member 17##BC003516|TBC1D17|79735|TBC1 domain family, member 17##AK022230|TBC1D17|79735|TBC1 domain family, member 17##AK300007|TBC1D17|79735|TBC1 domain family, member 17##AK309412|TBC1D17|79735|TBC1 domain family, member 17##AB449903|TBC1D17|79735|TBC1 domain family, member 17##BC016043|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC007416|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##AK226004|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC051844|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC015562|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_032375|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##AK123687|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_001098633|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_001098632|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5	0.010496	
chr20	36793560	36793731	reg1001394.p1	3.970	+	TSC_hg19_v1_chr20_-_36758362 M98479	-35254	-	TSC_hg19_v1_chr20_+_36662228 AB463518 CU689672	-131368	+	TSC_hg19_v1_chr20_+_36662168 BC033629 AK312468 BC001696	-131478	+	TSC_hg19_v1_chr20_-_36793673 AK291714 AK058031 AK295775 AK300292 AK314618 BC003551 NM_004613 NM_198951	34	-	AK096202 NM_001029864	95528	-	NM_001725 BC040955 TSC_hg19_v1_chr20_+_36932591 AK315328 AX713278 AX746123 AX752831 J04739 AK296568 BC032230 CU691936 DQ414688 AF322588	138943	+	M98479|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC033629|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##AK312468|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##BC001696|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##AK291714|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK058031|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK295775|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK300292|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK314618|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC003551|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_004613|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_198951|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755##NM_001725|BPI|671|bactericidal/permeability-increasing protein##BC040955|BPI|671|bactericidal/permeability-increasing protein##AK315328|BPI|671|bactericidal/permeability-increasing protein##AX713278|BPI|671|bactericidal/permeability-increasing protein##AX746123|BPI|671|bactericidal/permeability-increasing protein##AX752831|BPI|671|bactericidal/permeability-increasing protein##J04739|BPI|671|bactericidal/permeability-increasing protein##AK296568|BPI|671|bactericidal/permeability-increasing protein##BC032230|BPI|671|bactericidal/permeability-increasing protein##DQ414688|BPI|671|bactericidal/permeability-increasing protein##AF322588|BPI|671|bactericidal/permeability-increasing protein	0.023564	
chr20	4760994	4761138	reg1033989.p1	3.970	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	-58532	+	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	-94090	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	-531476	-	AY154472 NM_170774	34702	-	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	43128	-	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	221094	-	AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2	0.011173	
chr22	37336902	37336972	reg1031831.p1	3.970	+	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	-27279	+	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	-79829	+	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	-121418	-	BC042635 CR456416 NM_001163857 NM_178552	66920	-	D87292 TSC_hg19_v1_chr22_-_37415489 AK091874 BC010148 AK000862 AK223521 AK301300 NM_003312	78544	-	NM_001013436 NM_001130517 NM_021126 TSC_hg19_v1_chr22_+_37415789	78808	+	BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##BC042635|C22orf33|339669|chromosome 22 open reading frame 33##CR456416|C22orf33|339669|chromosome 22 open reading frame 33##NM_001163857|C22orf33|339669|chromosome 22 open reading frame 33##NM_178552|C22orf33|339669|chromosome 22 open reading frame 33##D87292|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK091874|TST|7263|thiosulfate sulfurtransferase (rhodanese)##BC010148|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK000862|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK223521|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK301300|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_003312|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_001013436|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001130517|MPST|4357|mercaptopyruvate sulfurtransferase##NM_021126|MPST|4357|mercaptopyruvate sulfurtransferase	0.0	
chr2	242052121	242052263	reg1032652.p1	3.970	+	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	-10466	-	NM_001080437	-113938	+	AK056601 NM_001085437	-216620	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	36679	-	AK308015 BC051689 TSC_hg19_v1_chr2_+_242089094	36866	+	CR749231 NM_001252120	37201	-	BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase##AK308015|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC051689|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##CR749231|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252120|PASK|23178|PAS domain containing serine/threonine kinase	0.0	
chr2	28582502	28582591	reg1029614.p2	3.970	+	BC014088 TSC_hg19_v1_chr2_-_28113982	-468577	-	TSC_hg19_v1_chr2_+_28113675 L38616 AF420602 AF420603 AF420604 AF420605	-468878	+	TSC_hg19_v1_chr2_+_28113621 AF015767	-468914	+	BX647822 TSC_hg19_v1_chr2_+_28615691	33134	+	TSC_hg19_v1_chr2_+_28615724 AK055579	33164	+	TSC_hg19_v1_chr2_+_28615779 NM_005253	33236	+	BC014088|LOC100302650|100302650|uncharacterized LOC100302650##L38616|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF420602|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF420603|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF420604|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF420605|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF015767|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##BX647822|FOSL2|2355|FOS-like antigen 2##AK055579|FOSL2|2355|FOS-like antigen 2##NM_005253|FOSL2|2355|FOS-like antigen 2	0.0	
chr3	509973	510083	reg1031980.p1	3.970	+	NM_001253388 BC104918 BC143496 BC143498 AB384920	-148616	+	TSC_hg19_v1_chr3_+_239671 AK055236	-270357	+	TSC_hg19_v1_chr3_+_238541 AF002246	-271436	+	AK126307 TSC_hg19_v1_chr3_+_577916	67887	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	624635	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	1630533	+	NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK055236|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AF002246|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4	0.427891	CTCF.p2:14:0.428
chr6	28317646	28317777	reg1033847.p2	3.970	+	NM_001243241 NM_001243242 NM_001243244 NM_030899	-13560	-	AL833617 NM_001135216 NM_001243243 BC008490	-13794	-	NM_001184743 NM_032507 TSC_hg19_v1_chr6_+_28249348 AK223446 AK291228 BC032507 BC040117 BC128585 BC069033	-68311	+	TSC_hg19_v1_chr6_+_28317723 AK091225 AX746861 NM_001242894 NM_001242895 NM_024493 AK122790 AK313532 BC006118	15	+	TSC_hg19_v1_chr6_-_28367519 BC041661 AB007886 NM_001163391	49810	-	AK309235 AL833347 AK092117 AX747363 NM_001012455	93542	-	NM_001243241|ZNF323|64288|zinc finger protein 323##NM_001243242|ZNF323|64288|zinc finger protein 323##NM_001243244|ZNF323|64288|zinc finger protein 323##NM_030899|ZNF323|64288|zinc finger protein 323##AL833617|ZNF323|64288|zinc finger protein 323##NM_001135216|ZNF323|64288|zinc finger protein 323##NM_001243243|ZNF323|64288|zinc finger protein 323##BC008490|ZNF323|64288|zinc finger protein 323##NM_001184743|PGBD1|84547|piggyBac transposable element derived 1##NM_032507|PGBD1|84547|piggyBac transposable element derived 1##AK223446|PGBD1|84547|piggyBac transposable element derived 1##AK291228|PGBD1|84547|piggyBac transposable element derived 1##BC032507|PGBD1|84547|piggyBac transposable element derived 1##BC040117|PGBD1|84547|piggyBac transposable element derived 1##BC128585|PGBD1|84547|piggyBac transposable element derived 1##BC069033|PGBD1|84547|piggyBac transposable element derived 1##AK091225|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001242894|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001242895|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_024493|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##AK122790|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##AK313532|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##BC006118|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##BC041661|ZSCAN12|9753|zinc finger and SCAN domain containing 12##AB007886|ZSCAN12|9753|zinc finger and SCAN domain containing 12##NM_001163391|ZSCAN12|9753|zinc finger and SCAN domain containing 12##AK309235|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AL833347|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AK092117|ZSCAN23|222696|zinc finger and SCAN domain containing 23##NM_001012455|ZSCAN23|222696|zinc finger and SCAN domain containing 23	0.0	
chr6	43337394	43337575	reg1031270.p1	3.970	+	TSC_hg19_v1_chr6_-_43337215 BC098434 AF090114 NM_014345 BC030687	-242	-	AB463553 AY555741 AY555742 AY555743 AY555744 NM_206922	-60955	-	TSC_hg19_v1_chr6_+_43266009 AK290806 AK309570 AK314822 BC033805 AK290796 BC017963 DQ893614 DQ896844 AF210455 AY050498	-71432	+	TSC_hg19_v1_chr6_+_43395310 AK000002 NM_001198934	57829	+	AY032599 NM_033450	62004	+	AY358126 NM_023932 BC110320	85788	-	BC098434|ZNF318|24149|zinc finger protein 318##AF090114|ZNF318|24149|zinc finger protein 318##NM_014345|ZNF318|24149|zinc finger protein 318##BC030687|ZNF318|24149|zinc finger protein 318##AY555741|CRIP3|401262|cysteine-rich protein 3##AY555742|CRIP3|401262|cysteine-rich protein 3##AY555743|CRIP3|401262|cysteine-rich protein 3##AY555744|CRIP3|401262|cysteine-rich protein 3##NM_206922|CRIP3|401262|cysteine-rich protein 3##AK290806|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK309570|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK314822|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC033805|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290796|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC017963|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ893614|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ896844|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF210455|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AY050498|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK000002|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_001198934|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##AY032599|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_033450|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##AY358126|DLK2|65989|delta-like 2 homolog (Drosophila)##NM_023932|DLK2|65989|delta-like 2 homolog (Drosophila)##BC110320|DLK2|65989|delta-like 2 homolog (Drosophila)	0.753096	CTCF.p2:2:0.753
chr8	102920523	102920625	reg1029562.p1	3.970	+	NM_032041	-117136	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-117374	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-117391	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	215949	-	NM_001040630	216560	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	330599	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.0	
chr8	11424480	11424605	reg1008823.p1	3.970	+	S76617 NM_001715 BC018703 BC004473 BC038555	-72949	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-100313	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-219538	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	137178	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	202726	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	235642	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.186446	
chr9	78594429	78594526	reg1034047.p1	3.970	+	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	-88842	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	-890967	+	TSC_hg19_v1_chr9_+_77703406 NM_012383	-891077	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	414914	-	AY196293 NM_001097634	462104	+	NM_001097633 NM_001490 TSC_hg19_v1_chr9_+_79074142 AY196294 AY196295 AL832647	479639	+	NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1##NM_012383|OSTF1|26578|osteoclast stimulating factor 1##BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097633|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001490|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196294|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196295|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AL832647|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.087632	
chr11	43141275	43141378	reg1034594.p2	3.969	+	AB046800 NM_020929	-2825663	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-2826732	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-6521524	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	192192	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	192238	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	192314	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.98897	CTCF.p2:41:0.989
chr11	72887114	72887211	reg1036181.p1	3.969	+	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	-34113	-	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-361680	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-361757	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	42182	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	42284	+	AK313942 TSC_hg19_v1_chr11_+_72929608	42454	+	AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.0	
chr12	103162422	103162489	reg1032080.p1	3.969	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-288073	-	M11568 TSC_hg19_v1_chr12_-_102874344	-288113	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-288133	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	148511	-	TSC_hg19_v1_chr12_-_103311062 BC026251	148608	-	L47726 NM_000277 U49897	148925	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.0	
chr1	234748657	234748774	reg1023673.p4	3.969	+	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-3469	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-4857	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-4884	-	TSC_hg19_v1_chr1_-_234895746 AF193050	147059	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	543374	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	543516	-	BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.01118	
chr17	76109005	76109084	reg1002338.p2	3.969	+	BC039479 NM_001142640 NM_018996	-108762	+	TSC_hg19_v1_chr17_+_75543021 AK096234	-566024	+	AK056495 NM_001113495	-637720	+	TSC_hg19_v1_chr17_-_76124768 AK074065	15728	-	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	15794	-	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	17822	+	BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK074065|TMC6|11322|transmembrane channel-like 6##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8	0.0	
chr2	233965078	233965258	reg1021933.p1	3.969	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-40052	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-40109	+	BC069151 BC107053 NM_005383	-67787	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	195098	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	195155	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	195189	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.213852	CTCF.p2:80:0.214
chr2	55126925	55127105	reg1003459.p1	3.969	+	NM_001039753	-174867	+	TSC_hg19_v1_chr2_+_54785519 AF327441 NM_178313 BC137282 BC137283	-341450	+	TSC_hg19_v1_chr2_+_54684338 BC032061	-442648	+	TSC_hg19_v1_chr2_-_55199899 BC131571	72893	-	AJ251385 AM392753 AM393122 AM393280 AM393537 BC139928 DQ778739 AF087901 BC014366 TSC_hg19_v1_chr2_-_55237387 BC007109 AF177332 AF132048 BC001035 AF077050 AF125103 NM_007008 AY102276	110357	-	AK302741 AF333336 NM_207521 AY123248	149295	-	NM_001039753|EML6|400954|echinoderm microtubule associated protein like 6##AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AJ251385|RTN4|57142|reticulon 4##AM392753|RTN4|57142|reticulon 4##AM393122|RTN4|57142|reticulon 4##AM393280|RTN4|57142|reticulon 4##AM393537|RTN4|57142|reticulon 4##BC139928|RTN4|57142|reticulon 4##DQ778739|RTN4|57142|reticulon 4##AF087901|RTN4|57142|reticulon 4##BC014366|RTN4|57142|reticulon 4##BC007109|RTN4|57142|reticulon 4##AF177332|RTN4|57142|reticulon 4##AF132048|RTN4|57142|reticulon 4##BC001035|RTN4|57142|reticulon 4##AF077050|RTN4|57142|reticulon 4##AF125103|RTN4|57142|reticulon 4##NM_007008|RTN4|57142|reticulon 4##AY102276|RTN4|57142|reticulon 4##AK302741|RTN4|57142|reticulon 4##AF333336|RTN4|57142|reticulon 4##NM_207521|RTN4|57142|reticulon 4##AY123248|RTN4|57142|reticulon 4	0.0	
chr4	111208779	111208909	reg1024701.p2	3.969	+	TSC_hg19_v1_chr4_-_111119772 BC001305 AK027031 NM_001130721 NM_024090	-89059	-	AK299306 NM_001178130 NM_001178131 NM_001963 X04571	-374797	+	AK126648 NM_198506	-436359	+	TSC_hg19_v1_chr4_+_111397181 AM888273 AM888274 AM888275 AM888276 AM888277 AM888278 AM888279 AM888280 AM888281 AM888282 AM888283 NM_001977 BC094770 L12468 BX641012 L14721 AK313412	188529	+	AK313987 TSC_hg19_v1_chr4_-_111543909	335066	-	BC007987 AF048722 TSC_hg19_v1_chr4_-_111544234 BC013998 NM_000325	335431	-	BC001305|ELOVL6|79071|ELOVL fatty acid elongase 6##AK027031|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_001130721|ELOVL6|79071|ELOVL fatty acid elongase 6##NM_024090|ELOVL6|79071|ELOVL fatty acid elongase 6##AK299306|EGF|1950|epidermal growth factor##NM_001178130|EGF|1950|epidermal growth factor##NM_001178131|EGF|1950|epidermal growth factor##NM_001963|EGF|1950|epidermal growth factor##X04571|EGF|1950|epidermal growth factor##AK126648|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##NM_198506|LRIT3|345193|leucine-rich repeat, immunoglobulin-like and transmembrane domains 3##AM888273|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888274|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888275|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888276|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888277|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888278|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888279|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888280|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888281|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888282|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AM888283|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##NM_001977|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BC094770|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L12468|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##BX641012|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##L14721|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313412|ENPEP|2028|glutamyl aminopeptidase (aminopeptidase A)##AK313987|PITX2|5308|paired-like homeodomain 2##AF048722|PITX2|5308|paired-like homeodomain 2##BC013998|PITX2|5308|paired-like homeodomain 2##NM_000325|PITX2|5308|paired-like homeodomain 2	0.0	
chr6	15906178	15906271	reg1031797.p2	3.969	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-242934	-	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	-243047	-	TSC_hg19_v1_chr6_+_15249113 AK303610	-657111	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	223078	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	223213	+	TSC_hg19_v1_chr6_+_16143281 AK026739	237086	+	NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein	0.0	
chr7	24441868	24442049	reg1011364.p2	3.969	+	BC029497 NM_000905 AK312156 K01911 M15789	-118115	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-692042	+	TSC_hg19_v1_chr7_+_23719821 NM_001127364 NM_001127365 NM_199136 BC042034 AK127774 AL832127 BC026000 BC063130 CU687660	-722135	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	171130	+	TSC_hg19_v1_chr7_-_24797042 BC099911	355079	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	355109	-	BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##NM_001127364|C7orf46|340277|chromosome 7 open reading frame 46##NM_001127365|C7orf46|340277|chromosome 7 open reading frame 46##NM_199136|C7orf46|340277|chromosome 7 open reading frame 46##BC042034|C7orf46|340277|chromosome 7 open reading frame 46##AK127774|C7orf46|340277|chromosome 7 open reading frame 46##AL832127|C7orf46|340277|chromosome 7 open reading frame 46##BC026000|C7orf46|340277|chromosome 7 open reading frame 46##BC063130|C7orf46|340277|chromosome 7 open reading frame 46##BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5	0.0	
chr8	84243340	84243434	reg1031896.p1	3.969	+	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	-1488914	-	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-1598628	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-1609861	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	852072	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	852156	+	TSC_hg19_v1_chr8_+_85095702 AK095026	852348	+	AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like	0.029598	
chrX	32264960	32265061	reg1031883.p1	3.969	+	L35854 NM_004013 NM_004020 NM_004021 NM_004022 NM_004023	-91425	-	NM_004014 S62617	-738596	-	CU688550 M92650 TSC_hg19_v1_chrX_-_31285072 BC070078 NM_004015 NM_004016 NM_004017 NM_004018 NM_004019 S42206 BC094758 AK299936 BC028720 S38776	-979976	-	NM_004011 NM_004012	165360	-	NM_004010 S81419 NM_004009 S64152	881533	-	S60972 X14298 AK309142 TSC_hg19_v1_chrX_-_33229631 M18533 BC010932 NM_004006	964540	-	L35854|DMD|1756|dystrophin##NM_004013|DMD|1756|dystrophin##NM_004020|DMD|1756|dystrophin##NM_004021|DMD|1756|dystrophin##NM_004022|DMD|1756|dystrophin##NM_004023|DMD|1756|dystrophin##NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin##M92650|DMD|1756|dystrophin##BC070078|DMD|1756|dystrophin##NM_004015|DMD|1756|dystrophin##NM_004016|DMD|1756|dystrophin##NM_004017|DMD|1756|dystrophin##NM_004018|DMD|1756|dystrophin##NM_004019|DMD|1756|dystrophin##S42206|DMD|1756|dystrophin##BC094758|DMD|1756|dystrophin##AK299936|DMD|1756|dystrophin##BC028720|DMD|1756|dystrophin##S38776|DMD|1756|dystrophin##NM_004011|DMD|1756|dystrophin##NM_004012|DMD|1756|dystrophin##NM_004010|DMD|1756|dystrophin##S81419|DMD|1756|dystrophin##NM_004009|DMD|1756|dystrophin##S64152|DMD|1756|dystrophin##S60972|DMD|1756|dystrophin##X14298|DMD|1756|dystrophin##AK309142|DMD|1756|dystrophin##M18533|DMD|1756|dystrophin##BC010932|DMD|1756|dystrophin##NM_004006|DMD|1756|dystrophin	0.02602	
chr11	299989	300065	reg1021516.p1	3.968	+	BC150562 BC150563 NM_001025295	-506	-	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	-10885	+	AF479748 AY154461 NM_138329	-21458	+	NM_006435 TSC_hg19_v1_chr11_+_308199 BC009696 DQ891667 DQ894615 BT009859 CR456894 CR541874 X02490	8143	+	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	13984	+	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	20817	-	BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##AF479748|NLRP6|171389|NLR family, pyrin domain containing 6##AY154461|NLRP6|171389|NLR family, pyrin domain containing 6##NM_138329|NLRP6|171389|NLR family, pyrin domain containing 6##NM_006435|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC009696|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ891667|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ894615|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BT009859|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR456894|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR541874|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##X02490|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3	0.0	
chr1	14057521	14057607	reg1034839.p1	3.968	+	NM_012231 NM_015866 U17838	-26215	+	TSC_hg19_v1_chr1_+_14026688 BC014468 NM_001135610	-30840	+	NM_001006624 NM_001006625	-145598	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	18321	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	18359	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	18377	+	NM_012231|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_015866|PRDM2|7799|PR domain containing 2, with ZNF domain##U17838|PRDM2|7799|PR domain containing 2, with ZNF domain##BC014468|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001135610|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001006624|PDPN|10630|podoplanin##NM_001006625|PDPN|10630|podoplanin##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain	0.09409	
chr1	154757489	154757655	reg1035740.p1	3.968	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-157107	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-157158	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-176872	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	74690	-	BX649146 TSC_hg19_v1_chr1_-_154840541	82929	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	85174	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.0	
chr12	94634122	94634215	reg1030398.p2	3.968	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	-91664	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-562985	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-668567	-	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	219363	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	219474	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	219564	-	AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41	0.0	
chr8	142128236	142128383	reg1031280.p1	3.968	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-117053	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-482685	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-606746	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	10428	+	AK128212 NM_001080431	110363	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	135881	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.0	
chrX	39674934	39675115	reg1034103.p2	3.968	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-1011484	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-1011564	+	BC008908 NM_021242	-1011952	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	281668	-	BC114220 NM_001123383 NM_001123384	361557	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	765162	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.0	
chr10	80734639	80734761	reg1032914.p2	3.967	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-941069	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-941144	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-945386	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	94088	+	TSC_hg19_v1_chr10_+_80899458 AK025812	164784	+	TSC_hg19_v1_chr10_+_81003207 AB033050	268430	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.022675	
chr1	225531438	225531578	reg1037279.p1	3.967	+	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	-414143	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-727329	+	AB209887 NM_001115113 NM_025160	-909508	-	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	84221	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	84293	-	NM_194442	85048	-	NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor##NM_194442|LBR|3930|lamin B receptor	0.987483	CTCF.p2:8:0.987
chr1	27815703	27815853	reg1032269.p2	3.967	+	BC001524 BC001855 AK024540 TSC_hg19_v1_chr1_-_27732180 AY007122	-83594	-	BC032702 NM_005281 TSC_hg19_v1_chr1_+_27719158 AK291185 AK314868	-96612	+	BC137466 AY358761 NM_207397	-105986	-	TSC_hg19_v1_chr1_-_27816621 AK303011 BC032724 BC050093 BC040943	822	-	TSC_hg19_v1_chr1_-_27816670 BC012329	893	-	TSC_hg19_v1_chr1_-_27816676 NM_001201404 NM_006990	898	-	BC001524|WASF2|10163|WAS protein family, member 2##BC001855|WASF2|10163|WAS protein family, member 2##AK024540|WASF2|10163|WAS protein family, member 2##AY007122|WASF2|10163|WAS protein family, member 2##BC032702|GPR3|2827|G protein-coupled receptor 3##NM_005281|GPR3|2827|G protein-coupled receptor 3##AK291185|GPR3|2827|G protein-coupled receptor 3##AK314868|GPR3|2827|G protein-coupled receptor 3##BC137466|CD164L2|388611|CD164 sialomucin-like 2##AY358761|CD164L2|388611|CD164 sialomucin-like 2##NM_207397|CD164L2|388611|CD164 sialomucin-like 2##AK303011|WASF2|10163|WAS protein family, member 2##BC032724|WASF2|10163|WAS protein family, member 2##BC040943|WASF2|10163|WAS protein family, member 2##BC012329|WASF2|10163|WAS protein family, member 2##NM_001201404|WASF2|10163|WAS protein family, member 2##NM_006990|WASF2|10163|WAS protein family, member 2	0.0	
chr20	47077837	47077942	reg1032206.p1	3.967	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-662571	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-663137	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-947205	+	AB037836 TSC_hg19_v1_chr20_-_47444291	366397	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	366550	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	460429	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.02097	
chr20	57445686	57445867	reg1003382.p2	3.967	+	NM_001077490 NM_080425	-17741	+	AJ251759 TSC_hg19_v1_chr20_-_57425958	-19819	-	AF105253 NM_016592 TSC_hg19_v1_chr20_+_57414802	-30978	+	TSC_hg19_v1_chr20_+_57464205 X56009	18418	+	TSC_hg19_v1_chr20_+_57466445 NM_000516 NM_001077488 NM_001077489 NM_080426 AK026564 AK225818 BC008855 BC089157	20581	+	TSC_hg19_v1_chr20_+_57466632 BC108315 BC002722 BC104928 X04408	20838	+	NM_001077490|GNAS|2778|GNAS complex locus##NM_080425|GNAS|2778|GNAS complex locus##AJ251759|GNAS-AS1|149775|GNAS antisense RNA 1 (non-protein coding)##AF105253|GNAS|2778|GNAS complex locus##NM_016592|GNAS|2778|GNAS complex locus##X56009|GNAS|2778|GNAS complex locus##NM_000516|GNAS|2778|GNAS complex locus##NM_001077488|GNAS|2778|GNAS complex locus##NM_001077489|GNAS|2778|GNAS complex locus##NM_080426|GNAS|2778|GNAS complex locus##AK026564|GNAS|2778|GNAS complex locus##AK225818|GNAS|2778|GNAS complex locus##BC008855|GNAS|2778|GNAS complex locus##BC089157|GNAS|2778|GNAS complex locus##BC108315|GNAS|2778|GNAS complex locus##BC002722|GNAS|2778|GNAS complex locus##BC104928|GNAS|2778|GNAS complex locus##X04408|GNAS|2778|GNAS complex locus	0.0	
chr3	147663937	147664059	reg1032675.p1	3.967	+	BC104848 BC104850 TSC_hg19_v1_chr3_+_147127864 AB464362	-536136	+	TSC_hg19_v1_chr3_+_147127156 NM_003412	-536827	+	NM_001243256 NM_032153	-539403	-	NM_000685 NM_004835 NM_009585 NM_031850 TSC_hg19_v1_chr3_+_148415688 AK291541 BC068494 BC022447 M87290 S77410 X65699	751689	+	NM_032049	783968	+	NM_001871 M81057 AK313940 AJ224866 BC015338 DQ890547 DQ893706 BT009910	881600	+	BC104848|ZIC1|7545|Zic family member 1##BC104850|ZIC1|7545|Zic family member 1##NM_003412|ZIC1|7545|Zic family member 1##NM_001243256|ZIC4|84107|Zic family member 4##NM_032153|ZIC4|84107|Zic family member 4##NM_000685|AGTR1|185|angiotensin II receptor, type 1##NM_004835|AGTR1|185|angiotensin II receptor, type 1##NM_009585|AGTR1|185|angiotensin II receptor, type 1##NM_031850|AGTR1|185|angiotensin II receptor, type 1##AK291541|AGTR1|185|angiotensin II receptor, type 1##BC068494|AGTR1|185|angiotensin II receptor, type 1##BC022447|AGTR1|185|angiotensin II receptor, type 1##M87290|AGTR1|185|angiotensin II receptor, type 1##S77410|AGTR1|185|angiotensin II receptor, type 1##X65699|AGTR1|185|angiotensin II receptor, type 1##NM_032049|AGTR1|185|angiotensin II receptor, type 1##NM_001871|CPB1|1360|carboxypeptidase B1 (tissue)##M81057|CPB1|1360|carboxypeptidase B1 (tissue)##AK313940|CPB1|1360|carboxypeptidase B1 (tissue)##AJ224866|CPB1|1360|carboxypeptidase B1 (tissue)##BC015338|CPB1|1360|carboxypeptidase B1 (tissue)##DQ890547|CPB1|1360|carboxypeptidase B1 (tissue)##DQ893706|CPB1|1360|carboxypeptidase B1 (tissue)##BT009910|CPB1|1360|carboxypeptidase B1 (tissue)	0.0	
chr4	123145583	123145763	reg1037767.p1	3.967	+	DQ335469 NM_015312	-53916	+	AY865574 NM_001130698	-272765	-	AB255423 AB255424 BC093682 BC093684 BC143239 NM_003305	-291444	-	CR936613 TSC_hg19_v1_chr4_+_123161129	15451	+	NM_139243 AK057303	154470	+	NM_001159285 NM_001159295 BC040229 AK093297 AX748040	154959	+	DQ335469|KIAA1109|84162|KIAA1109##NM_015312|KIAA1109|84162|KIAA1109##AY865574|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##NM_001130698|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##AB255423|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##AB255424|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##BC093682|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##BC093684|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##BC143239|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##NM_003305|TRPC3|7222|transient receptor potential cation channel, subfamily C, member 3##CR936613|KIAA1109|84162|KIAA1109##NM_139243|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK057303|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##NM_001159285|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##NM_001159295|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##BC040229|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)##AK093297|ADAD1|132612|adenosine deaminase domain containing 1 (testis-specific)	0.087778	
chr5	150369400	150369494	reg1032297.p2	3.967	+	TSC_hg19_v1_chr5_-_150326105 BC117490 BC126474 AK091436 AX746982 AK096536 BC022559	-43324	-	TSC_hg19_v1_chr5_-_150284541 AK096465 NM_001172831 NM_001172832 NM_052860	-84924	-	TSC_hg19_v1_chr5_-_150284430 AK300528	-85001	-	TSC_hg19_v1_chr5_+_150399998 NM_002084	30556	+	TSC_hg19_v1_chr5_+_150400151 AK310242 BC066949 D00632 BC025956 BC035841 BC050378 BC013218 BC013601 AF217787 CU690654	30726	+	BC012133 BX640647 TSC_hg19_v1_chr5_-_150460585 AK074400 BC007666 AK299975 AK303573	91127	-	BC117490|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##BC126474|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##AK091436|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##AK096536|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##BC022559|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##AK096465|ZNF300|91975|zinc finger protein 300##NM_001172831|ZNF300|91975|zinc finger protein 300##NM_001172832|ZNF300|91975|zinc finger protein 300##NM_052860|ZNF300|91975|zinc finger protein 300##AK300528|ZNF300|91975|zinc finger protein 300##NM_002084|GPX3|2878|glutathione peroxidase 3 (plasma)##AK310242|GPX3|2878|glutathione peroxidase 3 (plasma)##BC066949|GPX3|2878|glutathione peroxidase 3 (plasma)##D00632|GPX3|2878|glutathione peroxidase 3 (plasma)##BC025956|GPX3|2878|glutathione peroxidase 3 (plasma)##BC035841|GPX3|2878|glutathione peroxidase 3 (plasma)##BC050378|GPX3|2878|glutathione peroxidase 3 (plasma)##BC013218|GPX3|2878|glutathione peroxidase 3 (plasma)##BC013601|GPX3|2878|glutathione peroxidase 3 (plasma)##AF217787|GPX3|2878|glutathione peroxidase 3 (plasma)##BC012133|TNIP1|10318|TNFAIP3 interacting protein 1##BX640647|TNIP1|10318|TNFAIP3 interacting protein 1##AK074400|TNIP1|10318|TNFAIP3 interacting protein 1##BC007666|TNIP1|10318|TNFAIP3 interacting protein 1##AK299975|TNIP1|10318|TNFAIP3 interacting protein 1##AK303573|TNIP1|10318|TNFAIP3 interacting protein 1	0.305727	CTCF.p2:-3:0.292
chr6	166756279	166756413	reg1031845.p1	3.967	+	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	-312	-	BC018969 NM_145169 TSC_hg19_v1_chr6_-_166756020	-339	-	BC034775 NM_175922 TSC_hg19_v1_chr6_-_166721880	-34470	-	CU674406 TSC_hg19_v1_chr6_-_166796429 BC000810 AK312201 AK310934	40063	-	TSC_hg19_v1_chr6_-_166796469 AF125101 AF151887 NM_016098	40164	-	DQ891864 DQ895053 L07598 TSC_hg19_v1_chr6_-_167040629	284231	-	AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1##BC018969|SFT2D1|113402|SFT2 domain containing 1##NM_145169|SFT2D1|113402|SFT2 domain containing 1##BC034775|PRR18|285800|proline rich 18##NM_175922|PRR18|285800|proline rich 18##BC000810|BRP44L|51660|brain protein 44-like##AK312201|BRP44L|51660|brain protein 44-like##AF125101|BRP44L|51660|brain protein 44-like##AF151887|BRP44L|51660|brain protein 44-like##NM_016098|BRP44L|51660|brain protein 44-like##DQ891864|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##DQ895053|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##L07598|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	0.0	
chrX	80376436	80376536	reg1035770.p1	3.967	+	BC111490 AY497046 AY497048 AY497049 AY497050 AY497051 AY497052 AY497053 AY497054 AY497055 NM_153252	-311279	-	BX537938 NM_152630 BC030784 AK313875 BC028710 BC034979	-700524	+	AK128147 NM_001170574	-785484	+	NM_003022 AK024892 AK309350 BC103762 TSC_hg19_v1_chrX_+_80457495	80917	+	AK094058 AX748432 NM_030763	80954	-	TSC_hg19_v1_chrX_+_80457572 AK309351	81090	+	BC111490|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497046|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497048|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497049|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497050|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497051|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497052|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497053|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497054|BRWD3|254065|bromodomain and WD repeat domain containing 3##AY497055|BRWD3|254065|bromodomain and WD repeat domain containing 3##NM_153252|BRWD3|254065|bromodomain and WD repeat domain containing 3##BX537938|FAM46D|169966|family with sequence similarity 46, member D##NM_152630|FAM46D|169966|family with sequence similarity 46, member D##BC030784|FAM46D|169966|family with sequence similarity 46, member D##AK313875|FAM46D|169966|family with sequence similarity 46, member D##BC028710|FAM46D|169966|family with sequence similarity 46, member D##BC034979|FAM46D|169966|family with sequence similarity 46, member D##AK128147|FAM46D|169966|family with sequence similarity 46, member D##NM_001170574|FAM46D|169966|family with sequence similarity 46, member D##NM_003022|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK024892|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309350|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##BC103762|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like	0.0	
chr11	35051712	35051842	reg1034307.p1	3.966	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-113620	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-113888	-	NM_001135024 NM_001166158 NM_003477	-114101	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	108623	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	108957	+	TSC_hg19_v1_chr11_+_35160821 M59040	109041	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.022639	
chr12	46748072	46748177	reg1031818.p1	3.966	+	NM_001077484 NM_030674	-84917	-	BX647547 TSC_hg19_v1_chr12_-_46662796 AK225639 AF271070 BX648495 AK225778 AK308129	-85306	-	TSC_hg19_v1_chr12_-_46662776 BC010620 BX648676	-85381	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	18165	-	TSC_hg19_v1_chr12_-_46766619 NM_018976	18479	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	471632	-	NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##BX647547|SLC38A1|81539|solute carrier family 38, member 1##AK225639|SLC38A1|81539|solute carrier family 38, member 1##AF271070|SLC38A1|81539|solute carrier family 38, member 1##BX648495|SLC38A1|81539|solute carrier family 38, member 1##AK225778|SLC38A1|81539|solute carrier family 38, member 1##AK308129|SLC38A1|81539|solute carrier family 38, member 1##BC010620|SLC38A1|81539|solute carrier family 38, member 1##BX648676|SLC38A1|81539|solute carrier family 38, member 1##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4	0.0	
chr14	75677795	75677964	reg1032989.p2	3.966	+	TSC_hg19_v1_chr14_-_75643341 NM_006827	-34527	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	-34546	-	TSC_hg19_v1_chr14_-_75643322 AK296800 AK312384	-34559	-	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	67703	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	216762	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	217134	+	NM_006827|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK296800|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK312384|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2	0.0	
chr17	65527619	65527730	reg1035611.p1	3.966	+	BC007905 NM_012417 NM_181671	-153751	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-154086	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-154265	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	186376	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	294028	+	AK293224 TSC_hg19_v1_chr17_+_65822221	294543	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.0	
chr18	14992175	14992281	reg1035040.p1	3.966	+	AF269088 NM_001145029 BC028407	-243943	+	BC140940 BX649118 AK307658 NM_001137671	-448684	-	TSC_hg19_v1_chr18_+_14179298 BC127726	-812919	+	TSC_hg19_v1_chr18_-_18691640 AK307388	3699410	-	TSC_hg19_v1_chr18_-_18691765 AK057038 NM_005406	3699560	-	TSC_hg19_v1_chr18_+_18822192 AB051559 NM_001142966 BC125017	3830015	+	AF269088|ANKRD30B|374860|ankyrin repeat domain 30B##NM_001145029|ANKRD30B|374860|ankyrin repeat domain 30B##BC028407|ANKRD30B|374860|ankyrin repeat domain 30B##BC140940|POTEC|388468|POTE ankyrin domain family, member C##BX649118|POTEC|388468|POTE ankyrin domain family, member C##AK307658|POTEC|388468|POTE ankyrin domain family, member C##NM_001137671|POTEC|388468|POTE ankyrin domain family, member C##BC127726|ANKRD20A5P|440482|ankyrin repeat domain 20 family, member A5, pseudogene##AK307388|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AK057038|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##NM_005406|ROCK1|6093|Rho-associated, coiled-coil containing protein kinase 1##AB051559|GREB1L|80000|growth regulation by estrogen in breast cancer-like##NM_001142966|GREB1L|80000|growth regulation by estrogen in breast cancer-like##BC125017|GREB1L|80000|growth regulation by estrogen in breast cancer-like	0.978389	CTCF.p2:14:0.978
chr19	35546735	35546820	reg1037172.p1	3.966	+	TSC_hg19_v1_chr19_+_35532642 AK315655	-14121	+	TSC_hg19_v1_chr19_+_35532623 BC025716	-14151	+	M18930 NM_002151 NM_182983 X07732	-15368	+	TSC_hg19_v1_chr19_+_35550794 X07002	4033	+	NM_001136007 NM_001136008 NM_001136009 NM_001136010 NM_001136011 NM_001136012 NM_005971 NM_021910 BC090044 U28249	59987	+	X93036 TSC_hg19_v1_chr19_+_35607221 BC005238 AK311689	60444	+	AK315655|HPN|3249|hepsin##BC025716|HPN|3249|hepsin##M18930|HPN|3249|hepsin##NM_002151|HPN|3249|hepsin##NM_182983|HPN|3249|hepsin##X07732|HPN|3249|hepsin##X07002|HPN|3249|hepsin##NM_001136007|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136008|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136009|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136010|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136011|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_001136012|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_005971|FXYD3|5349|FXYD domain containing ion transport regulator 3##NM_021910|FXYD3|5349|FXYD domain containing ion transport regulator 3##BC090044|FXYD3|5349|FXYD domain containing ion transport regulator 3##U28249|FXYD3|5349|FXYD domain containing ion transport regulator 3##X93036|FXYD3|5349|FXYD domain containing ion transport regulator 3##BC005238|FXYD3|5349|FXYD domain containing ion transport regulator 3##AK311689|FXYD3|5349|FXYD domain containing ion transport regulator 3	0.252172	CTCF.p2:61:0.222
chr19	55118494	55118577	reg1030509.p1	3.966	+	BC047007 AK290919 AK311226 AF025530 NM_006863 BC032238 BC063009 AF025529	-13450	+	TSC_hg19_v1_chr19_+_55085279 U70665 BC017412 AK222651 AF025531 U82276 BC027916 EU915609 EU915610 CU675976 AF041034 U82277 U82278	-33226	+	TSC_hg19_v1_chr19_+_55085256 NM_001130917 NM_006866 U82275 AK130170	-33283	+	AK311555 BC015731 NM_006669 AK292028	10102	+	NM_001081638 NM_001081639 TSC_hg19_v1_chr19_+_55141934 AK223310 AF283984 AF004230 NM_001081637 AF283985	23432	+	NM_001081438 NM_006847	55588	+	BC047007|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AK290919|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AK311226|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AF025530|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##NM_006863|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##BC032238|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##BC063009|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AF025529|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##U70665|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC017412|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AK222651|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AF025531|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82276|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC027916|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##EU915609|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##EU915610|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82277|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82278|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_001130917|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_006866|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82275|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AK130170|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC015731|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_006669|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AK292028|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081638|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081639|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AK223310|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AF283984|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081637|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AF283985|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081438|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##NM_006847|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4	0.0	
chr5	142593744	142593925	reg1016650.p2	3.966	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-443526	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-443862	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-516263	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	188989	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	189272	-	BC015610 TSC_hg19_v1_chr5_-_142783214	189377	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr9	140083661	140083777	reg1027442.p2	3.966	+	NM_003731 TSC_hg19_v1_chr9_+_140083127 BC000864 BC004118 Z96932 BT006766 CR542238 BC015827	-593	+	TSC_hg19_v1_chr9_-_140083038 NM_013366	-674	-	TSC_hg19_v1_chr9_-_140083013 AK294601	-704	-	TSC_hg19_v1_chr9_-_140095194 NM_001128228	11476	-	TSC_hg19_v1_chr9_-_140100101 AX775751 BC009283 BC009461 NM_053045 BC067786	16374	-	TSC_hg19_v1_chr9_+_140100154 NM_001144026 NM_001144027 NM_001144028 NM_014434 AK290026 AK026089 AK225995 AK074403 AF199509 BC015735 BC078668 AY077845 BC093782 BC111943 BC143229 AB463918 DQ892229 DQ895429	16450	+	NM_003731|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##BC000864|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##BC004118|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##Z96932|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##BT006766|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##CR542238|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##BC015827|SSNA1|8636|Sjogren syndrome nuclear autoantigen 1##NM_013366|ANAPC2|29882|anaphase promoting complex subunit 2##AK294601|ANAPC2|29882|anaphase promoting complex subunit 2##NM_001128228|TPRN|286262|taperin##AX775751|TMEM203|94107|transmembrane protein 203##BC009283|TMEM203|94107|transmembrane protein 203##BC009461|TMEM203|94107|transmembrane protein 203##NM_053045|TMEM203|94107|transmembrane protein 203##BC067786|TMEM203|94107|transmembrane protein 203##NM_001144026|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##NM_001144027|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##NM_001144028|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##NM_014434|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##AK290026|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##AK026089|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##AK225995|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##AK074403|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##AF199509|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##BC015735|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##BC078668|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##AY077845|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##BC093782|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##BC111943|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##BC143229|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##DQ892229|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1##DQ895429|NDOR1|27158|NADPH dependent diflavin oxidoreductase 1	0.633882	CTCF.p2:-1:0.634
chr9	5530063	5530239	reg1027898.p2	3.966	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	-19488	+	TSC_hg19_v1_chr9_+_5450455 NM_014143 DQ836393 AK300470 AK314567 AF233516 BC069381	-79644	+	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	-92271	-	TSC_hg19_v1_chr9_+_5629121 NM_001135920 NM_001206557 NM_020829	98976	+	BC036853 TSC_hg19_v1_chr9_-_5630098	99939	-	AL834191 AB058718 TSC_hg19_v1_chr9_-_5833045 BC136771 BC136773 BC144404	302800	-	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_014143|CD274|29126|CD274 molecule##DQ836393|CD274|29126|CD274 molecule##AK300470|CD274|29126|CD274 molecule##AK314567|CD274|29126|CD274 molecule##AF233516|CD274|29126|CD274 molecule##BC069381|CD274|29126|CD274 molecule##BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46##NM_001135920|KIAA1432|57589|KIAA1432##NM_001206557|KIAA1432|57589|KIAA1432##NM_020829|KIAA1432|57589|KIAA1432##BC036853|C9orf46|55848|chromosome 9 open reading frame 46##AL834191|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AB058718|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136771|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136773|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC144404|ERMP1|79956|endoplasmic reticulum metallopeptidase 1	0.0	
chr10	18031850	18031939	reg1007150.p1	3.965	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	-180491	+	NM_001098844 BC157856	-237640	+	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	-345664	+	NM_001098844 BC157856	9327	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	66499	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	208935	+	BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12	0.0	
chr12	12628019	12628174	reg1032322.p1	3.965	+	TSC_hg19_v1_chr12_+_12510051 NM_058169 AK075028 BC013668 AY037865 AY037866 DQ891778 DQ894962 CU680646	-117931	+	AY358563 TSC_hg19_v1_chr12_-_12503210 AK023622 NM_018050 AK001160 BC032998	-124924	-	BC117136 BC126405 BC143725 AF074264 NM_002336 TSC_hg19_v1_chr12_-_12419947	-208254	-	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	87304	-	TSC_hg19_v1_chr12_+_12764831 BC106052 AF039081 NM_001310 AK307202	136699	+	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	136787	+	NM_058169|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AK075028|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##BC013668|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037865|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037866|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ891778|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ894962|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY358563|MANSC1|54682|MANSC domain containing 1##AK023622|MANSC1|54682|MANSC domain containing 1##NM_018050|MANSC1|54682|MANSC domain containing 1##AK001160|MANSC1|54682|MANSC domain containing 1##BC032998|MANSC1|54682|MANSC domain containing 1##BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6##BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6##BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6##AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6##NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6##AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16##BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2##AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2##AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2##BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2	0.0	
chr12	31964036	31964102	reg1031026.p1	3.965	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	-18865	-	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	-82013	-	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	-82095	-	TSC_hg19_v1_chr12_+_32112348 NM_018169	148262	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	148325	+	TSC_hg19_v1_chr12_+_32259750 BC010091	295645	+	BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)	0.0	
chr13	50510416	50510555	reg1034152.p1	3.965	+	TSC_hg19_v1_chr13_-_50367200 BC035090 NM_002267	-143362	-	TSC_hg19_v1_chr13_-_50366705 AK290528	-143750	-	TSC_hg19_v1_chr13_-_50366675 AF034756 DQ892644 DQ895882 AB528414 AF005263 Y12394 BC017355 BC024202 AK291000 AK223480	-143868	-	TSC_hg19_v1_chr13_-_50510444 AF052154 AF055016 BC022519 AK316576 BC007076 AK308818 AF334405 AK290576 NM_001127482 NM_020456	32	-	TSC_hg19_v1_chr13_+_50571212 NM_001007278 NM_005798 NM_052811 NM_213590 AY455758 AY764035 AK314496 AF241850 BC029514 AY191002 BC003579 BC063407 AF220127 AL360196	60695	+	AY169387 AY169388 NM_173605 NM_199464 AK313401 AY129654 AY129653 BC020887 BC032343 AY190921 AY190922 AL832695 CU689344 DQ891601 DQ894796	79024	+	BC035090|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##NM_002267|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK290528|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AF034756|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##DQ892644|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##DQ895882|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AF005263|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##Y12394|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC017355|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##BC024202|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK291000|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AK223480|KPNA3|3839|karyopherin alpha 3 (importin alpha 4)##AF052154|SPRYD7|57213|SPRY domain containing 7##AF055016|SPRYD7|57213|SPRY domain containing 7##BC022519|SPRYD7|57213|SPRY domain containing 7##AK316576|SPRYD7|57213|SPRY domain containing 7##BC007076|SPRYD7|57213|SPRY domain containing 7##AK308818|SPRYD7|57213|SPRY domain containing 7##AF334405|SPRYD7|57213|SPRY domain containing 7##AK290576|SPRYD7|57213|SPRY domain containing 7##NM_001127482|SPRYD7|57213|SPRY domain containing 7##NM_020456|SPRYD7|57213|SPRY domain containing 7##NM_001007278|TRIM13|10206|tripartite motif containing 13##NM_005798|TRIM13|10206|tripartite motif containing 13##NM_052811|TRIM13|10206|tripartite motif containing 13##NM_213590|TRIM13|10206|tripartite motif containing 13##AY455758|TRIM13|10206|tripartite motif containing 13##AY764035|TRIM13|10206|tripartite motif containing 13##AK314496|TRIM13|10206|tripartite motif containing 13##AF241850|TRIM13|10206|tripartite motif containing 13##BC029514|TRIM13|10206|tripartite motif containing 13##AY191002|TRIM13|10206|tripartite motif containing 13##BC003579|TRIM13|10206|tripartite motif containing 13##BC063407|TRIM13|10206|tripartite motif containing 13##AF220127|TRIM13|10206|tripartite motif containing 13##AL360196|TRIM13|10206|tripartite motif containing 13##AY169387|KCNRG|283518|potassium channel regulator##AY169388|KCNRG|283518|potassium channel regulator##NM_173605|KCNRG|283518|potassium channel regulator##NM_199464|KCNRG|283518|potassium channel regulator##AK313401|KCNRG|283518|potassium channel regulator##AY129654|KCNRG|283518|potassium channel regulator##AY129653|KCNRG|283518|potassium channel regulator##BC020887|KCNRG|283518|potassium channel regulator##BC032343|KCNRG|283518|potassium channel regulator##AY190921|KCNRG|283518|potassium channel regulator##AY190922|KCNRG|283518|potassium channel regulator##AL832695|TRIM13|10206|tripartite motif containing 13##DQ891601|KCNRG|283518|potassium channel regulator##DQ894796|KCNRG|283518|potassium channel regulator	0.02867	
chr17	79296729	79296835	reg1033788.p1	3.965	+	TSC_hg19_v1_chr17_-_79269100 NM_001037984 NM_138570	-27689	-	TSC_hg19_v1_chr17_-_79269071 BC014642	-27716	-	BC141912 BC127837 NM_001086521 TSC_hg19_v1_chr17_+_79213151 BC079831	-83648	+	AK096111 NM_178520	7691	-	NM_001080519	76757	+	TSC_hg19_v1_chr17_-_79478238 BC009544 BC010417 BC018861 M16247	181628	-	NM_001037984|SLC38A10|124565|solute carrier family 38, member 10##NM_138570|SLC38A10|124565|solute carrier family 38, member 10##BC014642|SLC38A10|124565|solute carrier family 38, member 10##BC127837|C17orf89|284184|chromosome 17 open reading frame 89##NM_001086521|C17orf89|284184|chromosome 17 open reading frame 89##BC079831|C17orf89|284184|chromosome 17 open reading frame 89##AK096111|TMEM105|284186|transmembrane protein 105##NM_178520|TMEM105|284186|transmembrane protein 105##NM_001080519|BAHCC1|57597|BAH domain and coiled-coil containing 1##BC009544|ACTG1|71|actin, gamma 1##BC010417|ACTG1|71|actin, gamma 1##BC018861|ACTG1|71|actin, gamma 1##M16247|ACTG1|71|actin, gamma 1	0.975764	CTCF.p2:-26:0.976
chr18	60571169	60571299	reg1032968.p1	3.965	+	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-186926	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-187308	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	-188570	+	TSC_hg19_v1_chr18_-_60795898 AF401211	224701	-	BC027258 NM_000633 NM_000657	415326	-	TSC_hg19_v1_chr18_-_60986977 X06487	415759	-	BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr6	15286254	15286391	reg1034139.p2	3.965	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-37209	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-37421	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-39910	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	376855	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	376968	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	842980	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.628482	CTCF.p2:16:0.628
chr6	37524848	37524945	reg1032671.p1	3.965	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-57200	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-57244	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-121459	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	140810	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	262394	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	262794	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.0	
chr1	32332055	32332153	reg1030620.p1	3.964	+	BC114430 AK131447 NM_144569 AK091016 AX746730	-50505	-	TSC_hg19_v1_chr1_-_32264318 AK095829	-67783	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	-67864	-	NM_001195100 NM_001195101	53154	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	71827	-	TSC_hg19_v1_chr1_-_32403992 NM_080391	71893	-	BC114430|SPOCD1|90853|SPOC domain containing 1##AK131447|SPOCD1|90853|SPOC domain containing 1##NM_144569|SPOCD1|90853|SPOC domain containing 1##AK091016|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2	0.0	
chr14	56229522	56229702	reg1033304.p1	3.964	+	L25616 TSC_hg19_v1_chr14_+_56078737 AB527439	-150863	+	TSC_hg19_v1_chr14_+_56046963 NM_001079521 NM_001079522 NM_004986 NM_182926 BC066337 D13629 AK302797 BC050555 BC058736 Z22551 AY264265 BC112337	-182510	+	BX248296 TSC_hg19_v1_chr14_-_56046835 AK124927	-182796	-	TSC_hg19_v1_chr14_+_56585131 BC009476 NM_021255 AK315727	355382	+	TSC_hg19_v1_chr14_+_56585163 AF302502	355562	+	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	816933	+	L25616|KTN1|3895|kinectin 1 (kinesin receptor)##NM_001079521|KTN1|3895|kinectin 1 (kinesin receptor)##NM_001079522|KTN1|3895|kinectin 1 (kinesin receptor)##NM_004986|KTN1|3895|kinectin 1 (kinesin receptor)##NM_182926|KTN1|3895|kinectin 1 (kinesin receptor)##BC066337|KTN1|3895|kinectin 1 (kinesin receptor)##D13629|KTN1|3895|kinectin 1 (kinesin receptor)##AK302797|KTN1|3895|kinectin 1 (kinesin receptor)##BC050555|KTN1|3895|kinectin 1 (kinesin receptor)##BC058736|KTN1|3895|kinectin 1 (kinesin receptor)##Z22551|KTN1|3895|kinectin 1 (kinesin receptor)##AY264265|KTN1|3895|kinectin 1 (kinesin receptor)##BC112337|KTN1|3895|kinectin 1 (kinesin receptor)##BX248296|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##AK124927|KTN1-AS1|100129075|KTN1 antisense RNA 1 (non-protein coding)##BC009476|PELI2|57161|pellino homolog 2 (Drosophila)##NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)##AK315727|PELI2|57161|pellino homolog 2 (Drosophila)##AF302502|PELI2|57161|pellino homolog 2 (Drosophila)##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101	0.0	
chr17	55910647	55910810	reg1008962.p1	3.964	+	AK093888 AX748353 NM_170721	-576355	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-576755	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-747585	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	16676	-	AK000746 NM_017949	70021	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	121948	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.0	
chr1	894496	894596	reg1035420.p2	3.964	+	TSC_hg19_v1_chr1_+_861084 NM_152486	-33445	+	TSC_hg19_v1_chr1_+_763052 AK311121 AK311732 AK026873 BC102012 BC102023 BC107481	-131476	+	BC042880 TSC_hg19_v1_chr1_+_763038	-131533	+	AB463150 AM393843 CU678496 TSC_hg19_v1_chr1_-_894632 AL050019 AK024284 AK225239 BC009786	82	-	TSC_hg19_v1_chr1_-_894646 AK315080	99	-	BC003555 TSC_hg19_v1_chr1_-_894655 NM_015658	118	-	NM_152486|SAMD11|148398|sterile alpha motif domain containing 11##AK311732|LOC643837|643837|uncharacterized LOC643837##AK026873|LOC643837|643837|uncharacterized LOC643837##BC102012|LOC643837|643837|uncharacterized LOC643837##BC102023|LOC643837|643837|uncharacterized LOC643837##BC107481|LOC643837|643837|uncharacterized LOC643837##BC042880|LOC643837|643837|uncharacterized LOC643837##AM393843|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AL050019|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK024284|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK225239|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##BC009786|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK315080|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##BC003555|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##NM_015658|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)	0.018835	
chr19	7239662	7239809	reg1035833.p1	3.964	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-140184	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-170020	+	AK315405 NM_001044387 NM_001044388 NM_024341	-170273	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	54225	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	220272	+	TSC_hg19_v1_chr19_+_7460061 AB011093	220342	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr20	37434304	37434416	reg1033506.p2	3.964	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	-6	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	-57248	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-81201	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	120629	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	120708	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	156629	+	AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35	0.0	
chr22	38712436	38712518	reg1025742.p1	3.964	+	TSC_hg19_v1_chr22_-_38669012 BC015489 AB097053 AK309071 AK292652 NM_001195072 NM_012264	-43469	-	TSC_hg19_v1_chr22_-_38668943 CR749859	-43532	-	NM_001195071	-43808	-	BC006490 AB091043 TSC_hg19_v1_chr22_-_38713340 AK223498	814	-	TSC_hg19_v1_chr22_-_38713439 NM_152221	937	-	AB024597 NM_001894	1611	-	BC015489|TMEM184B|25829|transmembrane protein 184B##AB097053|TMEM184B|25829|transmembrane protein 184B##AK309071|TMEM184B|25829|transmembrane protein 184B##AK292652|TMEM184B|25829|transmembrane protein 184B##NM_001195072|TMEM184B|25829|transmembrane protein 184B##NM_012264|TMEM184B|25829|transmembrane protein 184B##CR749859|TMEM184B|25829|transmembrane protein 184B##NM_001195071|TMEM184B|25829|transmembrane protein 184B##BC006490|CSNK1E|1454|casein kinase 1, epsilon##AB091043|CSNK1E|1454|casein kinase 1, epsilon##AK223498|CSNK1E|1454|casein kinase 1, epsilon##NM_152221|CSNK1E|1454|casein kinase 1, epsilon##AB024597|CSNK1E|1454|casein kinase 1, epsilon##NM_001894|CSNK1E|1454|casein kinase 1, epsilon	0.0	
chr5	88528099	88528224	reg1032899.p1	3.964	+	AL833268 AL833274 NM_001131005 NM_001193347	-328267	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-342897	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-343041	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	1177378	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1242021	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1242417	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr8	126365234	126365388	reg1031964.p1	3.964	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-261214	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-261254	-	TSC_hg19_v1_chr8_-_126104024 AK296970	-261289	-	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	77268	+	TSC_hg19_v1_chr8_-_126963395 BX648371	598102	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	1205244	-	NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##AK296970|KIAA0196|9897|KIAA0196##BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B	0.0	
chr8	144918744	144918815	reg1041688.p1	3.964	+	TSC_hg19_v1_chr8_-_144911540 AF114818 AK292373 NM_014281 NM_078480	-7229	-	TSC_hg19_v1_chr8_-_144911508 BC008875	-7268	-	U51586 AF190744 CR457143 CU679161 TSC_hg19_v1_chr8_-_144911483 AF217197	-7306	-	TSC_hg19_v1_chr8_-_144923180 BC071605 AK293943 NM_178564	4380	-	AB051895 NM_031308	28654	-	AF330791 TSC_hg19_v1_chr8_-_145013766 AY480051 NM_201384	94924	-	AF114818|PUF60|22827|poly-U binding splicing factor 60KDa##AK292373|PUF60|22827|poly-U binding splicing factor 60KDa##NM_014281|PUF60|22827|poly-U binding splicing factor 60KDa##NM_078480|PUF60|22827|poly-U binding splicing factor 60KDa##BC008875|PUF60|22827|poly-U binding splicing factor 60KDa##U51586|PUF60|22827|poly-U binding splicing factor 60KDa##AF190744|PUF60|22827|poly-U binding splicing factor 60KDa##CR457143|PUF60|22827|poly-U binding splicing factor 60KDa##AF217197|PUF60|22827|poly-U binding splicing factor 60KDa##BC071605|NRBP2|340371|nuclear receptor binding protein 2##AK293943|NRBP2|340371|nuclear receptor binding protein 2##NM_178564|NRBP2|340371|nuclear receptor binding protein 2##AB051895|EPPK1|83481|epiplakin 1##NM_031308|EPPK1|83481|epiplakin 1##AY480051|PLEC|5339|plectin##NM_201384|PLEC|5339|plectin	0.959813	CTCF.p2:8:0.960
chr8	37731869	37732050	reg1024396.p2	3.964	+	TSC_hg19_v1_chr8_-_37727937 AK026177	-4009	-	NM_018310 TSC_hg19_v1_chr8_-_37707430 AK294337	-24515	-	TSC_hg19_v1_chr8_-_37707395 AK315420 BC010648 AK001914 AF206673	-24573	-	AY280968 DQ083995 AF368294 DQ236342 BC077720 BC054881 TSC_hg19_v1_chr8_-_37757016 AK291781 AK026275 NM_001002814 NM_025151	25042	-	BC029504 NM_152413	65687	-	S53291 TSC_hg19_v1_chr8_-_37822825	90860	-	AK026177|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_018310|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK294337|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK315420|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##BC010648|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK001914|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AF206673|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AY280968|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ083995|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AF368294|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ236342|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC077720|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC054881|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK291781|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK026275|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_001002814|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_025151|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC029504|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##NM_152413|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##S53291|ADRB3|155|adrenergic, beta-3-, receptor	0.0	
chr10	116163502	116163606	reg1032892.p1	3.963	+	TSC_hg19_v1_chr10_+_115999012 AK122716 NM_198496 AJ536328 AJ616914 BC128588 AY572972 BC143380	-164395	+	AK122916 AL833340 NM_198795 BX648664 BC063133	-224483	+	NM_018017	-229191	-	AK123108 BC033212 AK027470 TSC_hg19_v1_chr10_-_116164254 AK294969 AK291712 AF474151	688	-	BC024314 NM_001001936 NM_032550	960	-	CU677968 TSC_hg19_v1_chr10_-_116251632	88053	-	AK122716|VWA2|340706|von Willebrand factor A domain containing 2##NM_198496|VWA2|340706|von Willebrand factor A domain containing 2##AJ536328|VWA2|340706|von Willebrand factor A domain containing 2##AJ616914|VWA2|340706|von Willebrand factor A domain containing 2##BC128588|VWA2|340706|von Willebrand factor A domain containing 2##AY572972|VWA2|340706|von Willebrand factor A domain containing 2##BC143380|VWA2|340706|von Willebrand factor A domain containing 2##AK122916|TDRD1|56165|tudor domain containing 1##AL833340|TDRD1|56165|tudor domain containing 1##NM_198795|TDRD1|56165|tudor domain containing 1##BX648664|TDRD1|56165|tudor domain containing 1##BC063133|TDRD1|56165|tudor domain containing 1##NM_018017|C10orf118|55088|chromosome 10 open reading frame 118##AK123108|AFAP1L2|84632|actin filament associated protein 1-like 2##BC033212|AFAP1L2|84632|actin filament associated protein 1-like 2##AK294969|AFAP1L2|84632|actin filament associated protein 1-like 2##AK291712|AFAP1L2|84632|actin filament associated protein 1-like 2##AF474151|AFAP1L2|84632|actin filament associated protein 1-like 2##BC024314|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_001001936|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_032550|AFAP1L2|84632|actin filament associated protein 1-like 2	0.813378	CTCF.p2:22:0.813
chr14	100713306	100713397	reg1034375.p2	3.963	+	TSC_hg19_v1_chr14_+_100705474 BC037308 M76541 BC020324 BC065366 AB464361 DQ891638 EU176600 CU691478	-7845	+	TSC_hg19_v1_chr14_+_100705309 M77698	-8039	+	NM_003403 TSC_hg19_v1_chr14_+_100705177	-8209	+	TSC_hg19_v1_chr14_-_100772779 AK096294 AK123821 AK310069 BC142945 AK172788 BX247983 NM_001039355	59488	-	AK092001 AX747302 TSC_hg19_v1_chr14_+_100789675 AB073385 AY569438 AY570298 NM_207117 BX248260 BC137253 BC137254 BC144549	76335	+	X59892 TSC_hg19_v1_chr14_-_100841685 BC095453 M61715	128340	-	BC037308|YY1|7528|YY1 transcription factor##M76541|YY1|7528|YY1 transcription factor##BC020324|YY1|7528|YY1 transcription factor##BC065366|YY1|7528|YY1 transcription factor##DQ891638|YY1|7528|YY1 transcription factor##EU176600|YY1|7528|YY1 transcription factor##M77698|YY1|7528|YY1 transcription factor##NM_003403|YY1|7528|YY1 transcription factor##AK096294|SLC25A29|123096|solute carrier family 25, member 29##AK123821|SLC25A29|123096|solute carrier family 25, member 29##AK310069|SLC25A29|123096|solute carrier family 25, member 29##AK172788|SLC25A29|123096|solute carrier family 25, member 29##BX247983|SLC25A29|123096|solute carrier family 25, member 29##NM_001039355|SLC25A29|123096|solute carrier family 25, member 29##AK092001|SLC25A47|283600|solute carrier family 25, member 47##AB073385|SLC25A47|283600|solute carrier family 25, member 47##AY569438|SLC25A47|283600|solute carrier family 25, member 47##AY570298|SLC25A47|283600|solute carrier family 25, member 47##NM_207117|SLC25A47|283600|solute carrier family 25, member 47##BX248260|SLC25A47|283600|solute carrier family 25, member 47##BC137253|SLC25A47|283600|solute carrier family 25, member 47##BC137254|SLC25A47|283600|solute carrier family 25, member 47##BC144549|SLC25A47|283600|solute carrier family 25, member 47##X59892|WARS|7453|tryptophanyl-tRNA synthetase##BC095453|WARS|7453|tryptophanyl-tRNA synthetase##M61715|WARS|7453|tryptophanyl-tRNA synthetase	0.794653	CTCF.p2:10:0.795
chr17	26870885	26871036	reg1033513.p1	3.963	+	NM_003593 Y11739	-20002	+	TSC_hg19_v1_chr17_+_26800661 AK314684 NM_001145975 NM_001145976 NM_003984 U26209 BC096276 BC096277 BC096278 BC096279 AK091926 AK298388 AK303909 AK303936	-70254	+	CU678258 TSC_hg19_v1_chr17_+_26794963	-76057	+	AF028788 AF028789 TSC_hg19_v1_chr17_-_26879616 AK292329 BC027176 U40998	8650	-	NM_005148 NM_054035 TSC_hg19_v1_chr17_-_26879647 AB593014	8692	-	AY359112 AB057723 AB527641 CU686718 TSC_hg19_v1_chr17_-_26898525 AK055512 BC069228 AK075428 AK297046 AK314583	27569	-	NM_003593|FOXN1|8456|forkhead box N1##Y11739|FOXN1|8456|forkhead box N1##AK314684|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145975|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145976|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_003984|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##U26209|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096276|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096277|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096278|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096279|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK091926|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK298388|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303909|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303936|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AF028788|UNC119|9094|unc-119 homolog (C. elegans)##AF028789|UNC119|9094|unc-119 homolog (C. elegans)##AK292329|UNC119|9094|unc-119 homolog (C. elegans)##BC027176|UNC119|9094|unc-119 homolog (C. elegans)##U40998|UNC119|9094|unc-119 homolog (C. elegans)##NM_005148|UNC119|9094|unc-119 homolog (C. elegans)##NM_054035|UNC119|9094|unc-119 homolog (C. elegans)##AB593014|UNC119|9094|unc-119 homolog (C. elegans)##AY359112|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AB057723|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK055512|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##BC069228|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK075428|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK297046|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK314583|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S	0.0	
chr19	39988616	39988740	reg1037153.p2	3.963	+	TSC_hg19_v1_chr19_+_39971510 BC010736 AY444561 BC009072	-17142	+	TSC_hg19_v1_chr19_+_39971488 AY551341	-17188	+	TSC_hg19_v1_chr19_+_39971479 BC050082	-17212	+	AK308460 TSC_hg19_v1_chr19_+_39989556 NM_016941 NM_203486	867	+	TSC_hg19_v1_chr19_+_39989585 AK075302	911	+	TSC_hg19_v1_chr19_+_39989603 BC000218 BC011850 DQ891847 DQ895035	929	+	BC010736|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##AY444561|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##BC009072|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##AY551341|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##BC050082|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##AK308460|DLL3|10683|delta-like 3 (Drosophila)##NM_016941|DLL3|10683|delta-like 3 (Drosophila)##NM_203486|DLL3|10683|delta-like 3 (Drosophila)##AK075302|DLL3|10683|delta-like 3 (Drosophila)##BC000218|DLL3|10683|delta-like 3 (Drosophila)##DQ891847|DLL3|10683|delta-like 3 (Drosophila)##DQ895035|DLL3|10683|delta-like 3 (Drosophila)	1.50352	CTCF.p2:-17:0.982	CTCF.p2:17:0.487
chr19	45273824	45273936	reg1001482.p1	3.963	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	-21899	+	BC144608 NM_001039213	-71460	+	BC083499 NM_001127893 NM_020219	-99157	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	7276	+	TSC_hg19_v1_chr19_+_45312359 BC014065 NM_001013257 NM_005581 X83425 BC036745 X80026 BC050450 AB463427 CU690688 HE572749	38476	+	NM_001042724 NM_002856 TSC_hg19_v1_chr19_+_45349482	75562	+	NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##BC083499|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_001127893|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_020219|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_001042724|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##NM_002856|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)	0.0	
chr6	3157810	3157989	reg1033864.p1	3.963	+	AY159127 CR541958 CU674602 AB528583 DQ892343 DQ895718 BC001194 TSC_hg19_v1_chr6_-_3157779 BC018780 X79535 AK308772 AK312621 NM_001069	-153	-	TSC_hg19_v1_chr6_+_3118961 AK297518 NM_004332 AK314909 AL832502 AJ617684 X81372	-38948	+	BC126254 BC126256 HQ258488 NM_003804 U50062 AK304701	-80835	+	BT019930 CR456788 CU674662 BC063610 TSC_hg19_v1_chr6_-_3227888 AK308806 AK289433 AK297568 BC001352 NM_178012	69972	-	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	101259	+	TSC_hg19_v1_chr6_+_3259232 AK126623 AK095683	101340	+	AY159127|TUBB2A|7280|tubulin, beta 2A class IIa##CR541958|TUBB2A|7280|tubulin, beta 2A class IIa##DQ892343|TUBB2A|7280|tubulin, beta 2A class IIa##DQ895718|TUBB2A|7280|tubulin, beta 2A class IIa##BC001194|TUBB2A|7280|tubulin, beta 2A class IIa##BC018780|TUBB2A|7280|tubulin, beta 2A class IIa##X79535|TUBB2A|7280|tubulin, beta 2A class IIa##AK312621|TUBB2A|7280|tubulin, beta 2A class IIa##NM_001069|TUBB2A|7280|tubulin, beta 2A class IIa##AK297518|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##NM_004332|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AK314909|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AL832502|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AJ617684|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##X81372|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BT019930|TUBB2B|347733|tubulin, beta 2B class IIb##CR456788|TUBB2B|347733|tubulin, beta 2B class IIb##BC063610|TUBB2B|347733|tubulin, beta 2B class IIb##AK308806|TUBB2B|347733|tubulin, beta 2B class IIb##AK289433|TUBB2B|347733|tubulin, beta 2B class IIb##AK297568|TUBB2B|347733|tubulin, beta 2B class IIb##BC001352|TUBB2B|347733|tubulin, beta 2B class IIb##NM_178012|TUBB2B|347733|tubulin, beta 2B class IIb##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4	0.106595	
chr6	87864513	87864693	reg1024533.p1	3.963	+	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	-59785	-	NM_000865	-217580	+	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	-1476166	-	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	686	+	TSC_hg19_v1_chr6_+_87964930 AL832366	100377	+	BC016386 TSC_hg19_v1_chr6_+_87967437	102832	+	V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292##AL832366|ZNF292|23036|zinc finger protein 292##BC016386|ZNF292|23036|zinc finger protein 292	0.027398	
chr7	83818301	83818428	reg1035396.p1	3.963	+	NM_012431	-539886	-	AK303925 NM_001178129	-547618	-	TSC_hg19_v1_chr7_-_82792195 NM_014510 NM_033026 AK297315	-1026128	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	5958	-	NM_152754	932882	-	AK309116 TSC_hg19_v1_chr7_-_84816296	997871	-	NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_014510|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_033026|PCLO|27445|piccolo (presynaptic cytomatrix protein)##AK297315|PCLO|27445|piccolo (presynaptic cytomatrix protein)##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	0.065609	
chr10	1685718	1685801	reg1026508.p2	3.962	+	TSC_hg19_v1_chr10_+_1102822 AK292591	-582933	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-582990	+	BC057827 TSC_hg19_v1_chr10_-_1102645	-583107	-	AF034837 NM_018702	93910	-	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	1423988	+	AK092597 AX747622 NM_001242339	1425059	+	AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC057827|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet	0.083948	
chr13	111037814	111037898	reg1035444.p1	3.962	+	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	-78235	+	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	-78347	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	-235121	-	BX648393 TSC_hg19_v1_chr13_+_111134980	97102	+	AK025912 TSC_hg19_v1_chr13_+_111137262	99408	+	TSC_hg19_v1_chr13_+_111138079 M24766	100232	+	AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BX648393|COL4A2|1284|collagen, type IV, alpha 2##AK025912|COL4A2|1284|collagen, type IV, alpha 2##M24766|COL4A2|1284|collagen, type IV, alpha 2	0.0	
chr16	67318893	67319021	reg1033707.p2	3.962	+	TSC_hg19_v1_chr16_+_67313455 BC063501 NM_001129729 NM_001129731 BC054486	-5515	+	AK308298 TSC_hg19_v1_chr16_+_67313229	-5772	+	TSC_hg19_v1_chr16_+_67312980 NM_001129728	-5943	+	BC070103 BC094790 AK302748 AK302567 BC117335 NM_001100915 AK097481	41687	-	TSC_hg19_v1_chr16_+_67360728 AY963267 BC026156 NM_018296 BC018031	41795	+	AK311487 NM_001161575 AK297329 AK309897 AK001866 AK292311 AY313780 AK301766	62321	+	BC063501|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129729|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129731|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC054486|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##AK308298|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129728|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC070103|KCTD19|146212|potassium channel tetramerisation domain containing 19##BC094790|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK302748|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK302567|KCTD19|146212|potassium channel tetramerisation domain containing 19##BC117335|KCTD19|146212|potassium channel tetramerisation domain containing 19##NM_001100915|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK097481|KCTD19|146212|potassium channel tetramerisation domain containing 19##AY963267|LRRC36|55282|leucine rich repeat containing 36##BC026156|LRRC36|55282|leucine rich repeat containing 36##NM_018296|LRRC36|55282|leucine rich repeat containing 36##BC018031|LRRC36|55282|leucine rich repeat containing 36##AK311487|LRRC36|55282|leucine rich repeat containing 36##NM_001161575|LRRC36|55282|leucine rich repeat containing 36##AK297329|LRRC36|55282|leucine rich repeat containing 36##AK309897|LRRC36|55282|leucine rich repeat containing 36##AK001866|LRRC36|55282|leucine rich repeat containing 36##AK292311|LRRC36|55282|leucine rich repeat containing 36##AY313780|LRRC36|55282|leucine rich repeat containing 36##AK301766|LRRC36|55282|leucine rich repeat containing 36	1.010496	CTCF.p2:49:0.809	CTCF.p2:-80:0.201
chr17	8842985	8843166	reg1022958.p1	3.962	+	AY725853 AF128881 NM_014308	-27259	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-72091	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-140523	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	25906	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	81892	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	636056	-	AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8	0.0	
chr20	3800840	3800910	reg1024178.p1	3.962	+	TSC_hg19_v1_chr20_+_3776956 S78187 Z68092 BC006395 M81934	-23870	+	AK092713 FR695900 FR695901 NM_004358 NM_021872 NM_021873 TSC_hg19_v1_chr20_+_3776429 BX647988 BC051711	-24442	+	TSC_hg19_v1_chr20_-_3767358 X05299 AB464478 AF002713 BC053847 NM_001810	-33740	-	TSC_hg19_v1_chr20_+_3801202 NM_001204446 NM_001204447 NM_018347 BC011985 AK002030 AK093332 BC043344	323	+	TSC_hg19_v1_chr20_+_3827524 NM_001206491 NM_020746 AK296897 AB097003 AK123956 AK291785 BX649084 AK023799 AX775775 BC044952 AK130992	26621	+	AK021791 NM_024960 TSC_hg19_v1_chr20_+_3869569	68657	+	S78187|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##Z68092|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BC006395|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##M81934|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##AK092713|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##FR695900|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##FR695901|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_004358|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_021872|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_021873|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BX647988|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BC051711|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##X05299|CENPB|1059|centromere protein B, 80kDa##AF002713|CENPB|1059|centromere protein B, 80kDa##BC053847|CENPB|1059|centromere protein B, 80kDa##NM_001810|CENPB|1059|centromere protein B, 80kDa##NM_001204446|C20orf29|55317|chromosome 20 open reading frame 29##NM_001204447|C20orf29|55317|chromosome 20 open reading frame 29##NM_018347|C20orf29|55317|chromosome 20 open reading frame 29##BC011985|C20orf29|55317|chromosome 20 open reading frame 29##AK002030|C20orf29|55317|chromosome 20 open reading frame 29##AK093332|C20orf29|55317|chromosome 20 open reading frame 29##BC043344|C20orf29|55317|chromosome 20 open reading frame 29##NM_001206491|MAVS|57506|mitochondrial antiviral signaling protein##NM_020746|MAVS|57506|mitochondrial antiviral signaling protein##AK296897|MAVS|57506|mitochondrial antiviral signaling protein##AB097003|MAVS|57506|mitochondrial antiviral signaling protein##AK123956|MAVS|57506|mitochondrial antiviral signaling protein##AK291785|MAVS|57506|mitochondrial antiviral signaling protein##BX649084|MAVS|57506|mitochondrial antiviral signaling protein##AK023799|MAVS|57506|mitochondrial antiviral signaling protein##BC044952|MAVS|57506|mitochondrial antiviral signaling protein##AK130992|MAVS|57506|mitochondrial antiviral signaling protein##AK021791|PANK2|80025|pantothenate kinase 2##NM_024960|PANK2|80025|pantothenate kinase 2	0.961554	
chr2	109253863	109253996	reg1034682.p1	3.962	+	TSC_hg19_v1_chr2_+_109237706 AK304260 NM_001193484 AF527760 AK310547	-16226	+	TSC_hg19_v1_chr2_+_109223602 AF527762 NM_001193482	-30312	+	TSC_hg19_v1_chr2_+_109204921 BC005341 NM_001193488	-48960	+	AF527759 NM_001193485	17338	+	TSC_hg19_v1_chr2_+_109271492 AK302411 AK312178	17559	+	TSC_hg19_v1_chr2_+_109335970 D42063 NM_006267	82009	+	AK304260|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193484|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527760|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK310547|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527762|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193482|LIMS1|3987|LIM and senescent cell antigen-like domains 1##BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3##D42063|RANBP2|5903|RAN binding protein 2##NM_006267|RANBP2|5903|RAN binding protein 2	0.0	
chr2	231276542	231276674	reg1034735.p2	3.962	+	TSC_hg19_v1_chr2_+_231191907 NM_138402	-84682	+	AK301317 AK301267 NM_001005176 NM_007237 U36499 U36500 U63420 BC105744 BC105960 BC105743 BC054890 BC070160 BC038091	-186145	+	AK301097 NM_001185015	-186165	-	NM_001080391 NM_001206701 NM_001206702 NM_001206703 NM_003113 TSC_hg19_v1_chr2_+_231280903	4279	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	4311	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	4348	+	NM_138402|SP140L|93349|SP140 nuclear body protein-like##AK301317|SP140|11262|SP140 nuclear body protein##AK301267|SP140|11262|SP140 nuclear body protein##NM_001005176|SP140|11262|SP140 nuclear body protein##NM_007237|SP140|11262|SP140 nuclear body protein##U36499|SP140|11262|SP140 nuclear body protein##U36500|SP140|11262|SP140 nuclear body protein##U63420|SP140|11262|SP140 nuclear body protein##BC105744|SP140|11262|SP140 nuclear body protein##BC105960|SP140|11262|SP140 nuclear body protein##BC105743|SP140|11262|SP140 nuclear body protein##BC054890|SP140|11262|SP140 nuclear body protein##BC070160|SP140|11262|SP140 nuclear body protein##BC038091|SP140|11262|SP140 nuclear body protein##AK301097|SP110|3431|SP110 nuclear body protein##NM_001185015|SP110|3431|SP110 nuclear body protein##NM_001080391|SP100|6672|SP100 nuclear antigen##NM_001206701|SP100|6672|SP100 nuclear antigen##NM_001206702|SP100|6672|SP100 nuclear antigen##NM_001206703|SP100|6672|SP100 nuclear antigen##NM_003113|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen	0.0	
chr5	149591003	149591117	reg1031508.p2	3.962	+	TSC_hg19_v1_chr5_+_149569812 BC093785 BC113425 BC069631 HQ258340 S80071	-21210	+	AK096607 NM_014228 TSC_hg19_v1_chr5_+_149569631 AK312309 AK308895	-21476	+	TSC_hg19_v1_chr5_+_149546340 NM_001804 AF239666 U51095 BC096249 BC096250 BC096251 BC096252 BC127122 AB463469	-44672	+	AB385410 EU832105 EU832199 AF145710 AF145711 AF091486 TSC_hg19_v1_chr5_-_149669337 BC040457 AB023185 AK308853	78227	-	TSC_hg19_v1_chr5_-_149669400 AK289776 NM_015981 NM_171825	78342	-	AY875937 BC129995 BC129996 TSC_hg19_v1_chr5_-_149682021	90918	-	BC093785|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##BC113425|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##BC069631|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##HQ258340|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##S80071|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK096607|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##NM_014228|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK312309|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##AK308895|SLC6A7|6534|solute carrier family 6 (neurotransmitter transporter, L-proline), member 7##NM_001804|CDX1|1044|caudal type homeobox 1##AF239666|CDX1|1044|caudal type homeobox 1##U51095|CDX1|1044|caudal type homeobox 1##BC096249|CDX1|1044|caudal type homeobox 1##BC096250|CDX1|1044|caudal type homeobox 1##BC096251|CDX1|1044|caudal type homeobox 1##BC096252|CDX1|1044|caudal type homeobox 1##BC127122|CDX1|1044|caudal type homeobox 1##EU832105|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##EU832199|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AF145710|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AF145711|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AF091486|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##BC040457|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AB023185|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AK308853|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AK289776|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##NM_015981|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##NM_171825|CAMK2A|815|calcium/calmodulin-dependent protein kinase II alpha##AY875937|ARSI|340075|arylsulfatase family, member I##BC129995|ARSI|340075|arylsulfatase family, member I##BC129996|ARSI|340075|arylsulfatase family, member I	0.083272	
chr5	71540895	71540996	reg1024354.p1	3.962	+	TSC_hg19_v1_chr5_+_71502701 AK125194	-38182	+	TSC_hg19_v1_chr5_+_71403301 BC017240 NM_005909 BC025240 BC139918 BC150196 BC046114 AK096273 AK308147 BX647077 BC039822 BC108733 BC032516 BC073993 BC056145 BC063669 BC094834 AB463119	-137666	+	NM_004291 BC029882 U16826 CR542216 CU688778 EU831800 EU831877	-525891	+	CU687962 D87453 TSC_hg19_v1_chr5_-_71616067 BC064902 BC011818 AK299412 AK025417 AK309065	75113	-	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	75135	-	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	75257	+	AK125194|MAP1B|4131|microtubule-associated protein 1B##BC017240|MAP1B|4131|microtubule-associated protein 1B##NM_005909|MAP1B|4131|microtubule-associated protein 1B##BC025240|MAP1B|4131|microtubule-associated protein 1B##BC139918|MAP1B|4131|microtubule-associated protein 1B##BC150196|MAP1B|4131|microtubule-associated protein 1B##BC046114|MAP1B|4131|microtubule-associated protein 1B##AK096273|MAP1B|4131|microtubule-associated protein 1B##AK308147|MAP1B|4131|microtubule-associated protein 1B##BX647077|MAP1B|4131|microtubule-associated protein 1B##BC039822|MAP1B|4131|microtubule-associated protein 1B##BC108733|MAP1B|4131|microtubule-associated protein 1B##BC032516|MAP1B|4131|microtubule-associated protein 1B##BC073993|MAP1B|4131|microtubule-associated protein 1B##BC056145|MAP1B|4131|microtubule-associated protein 1B##BC063669|MAP1B|4131|microtubule-associated protein 1B##BC094834|MAP1B|4131|microtubule-associated protein 1B##NM_004291|CARTPT|9607|CART prepropeptide##BC029882|CARTPT|9607|CART prepropeptide##U16826|CARTPT|9607|CART prepropeptide##CR542216|CARTPT|9607|CART prepropeptide##EU831800|CARTPT|9607|CART prepropeptide##EU831877|CARTPT|9607|CART prepropeptide##D87453|MRPS27|23107|mitochondrial ribosomal protein S27##BC064902|MRPS27|23107|mitochondrial ribosomal protein S27##BC011818|MRPS27|23107|mitochondrial ribosomal protein S27##AK299412|MRPS27|23107|mitochondrial ribosomal protein S27##AK025417|MRPS27|23107|mitochondrial ribosomal protein S27##AK309065|MRPS27|23107|mitochondrial ribosomal protein S27##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2	0.0	
chr5	95775723	95775836	reg1038276.p1	3.962	+	AB208874 AB590528 BC130295 BC136486 TSC_hg19_v1_chr5_-_95768927 X64810 M90753 BC031211 NM_000439	-6957	-	AK303888 NM_001177875	-7917	-	AK308575 NM_001177876	-27091	-	TSC_hg19_v1_chr5_+_95997755 NM_001190442 AB208816	221972	+	TSC_hg19_v1_chr5_+_95997965 BC016066 NM_001042440	222149	+	BC013579 TSC_hg19_v1_chr5_+_95998220	222416	+	AB208874|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC130295|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC136486|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##X64810|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##M90753|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##BC031211|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_000439|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AK303888|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177875|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##AK308575|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001177876|PCSK1|5122|proprotein convertase subtilisin/kexin type 1##NM_001190442|CAST|831|calpastatin##AB208816|CAST|831|calpastatin##BC016066|CAST|831|calpastatin##NM_001042440|CAST|831|calpastatin##BC013579|CAST|831|calpastatin	0.053976	
chr10	49085302	49085421	reg1041735.p1	3.961	+	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-257419	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	-257752	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	-278438	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	122460	-	CR749241 NM_001018071	397565	-	TSC_hg19_v1_chr10_+_49514722 AK292523	429425	+	BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##AK292523|MAPK8|5599|mitogen-activated protein kinase 8	0.043077	
chr13	69898361	69898499	reg1037675.p1	3.961	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-2093926	-	AK289924 NM_022843	-7908776	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-7909177	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	784111	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	2541829	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	2542333	-	BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)	0.839788	CTCF.p2:23:0.840
chr16	11199181	11199327	reg1036968.p1	3.961	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-160811	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-163019	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-163088	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	150796	-	X63758 BC096135 BC096136 BC096137 NM_005425	163884	-	NM_021247	168197	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr18	10685655	10685835	reg1037551.p2	3.961	+	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-159648	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-159689	+	TSC_hg19_v1_chr18_+_10526033 AK294038 U78107 AK314495	-159717	+	NM_022068	463015	-	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	1003467	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	1065770	+	CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK294038|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##U78107|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK314495|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.0	
chr19	1206408	1206531	reg1032407.p1	3.961	+	TSC_hg19_v1_chr19_+_1205777 NM_000455 AF217978	-663	+	TSC_hg19_v1_chr19_-_1174268 AK300981 AK292407 NM_014963	-32190	-	TSC_hg19_v1_chr19_-_1174260 AB023180	-32210	-	BC007981 AF035625 BC019334 AK314858 AB209553 EF644172 DQ893232 DQ896561 AB528360 CU675883 U63333 TSC_hg19_v1_chr19_+_1206921	222	+	BC146278 BC148727 TSC_hg19_v1_chr19_+_1207211	704	+	BC028156 NM_152769	31445	-	NM_000455|STK11|6794|serine/threonine kinase 11##AF217978|STK11|6794|serine/threonine kinase 11##AK300981|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##AK292407|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##NM_014963|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##AB023180|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##BC007981|STK11|6794|serine/threonine kinase 11##AF035625|STK11|6794|serine/threonine kinase 11##BC019334|STK11|6794|serine/threonine kinase 11##AK314858|STK11|6794|serine/threonine kinase 11##AB209553|STK11|6794|serine/threonine kinase 11##EF644172|STK11|6794|serine/threonine kinase 11##DQ893232|STK11|6794|serine/threonine kinase 11##DQ896561|STK11|6794|serine/threonine kinase 11##U63333|STK11|6794|serine/threonine kinase 11##BC146278|EFNA2|1943|ephrin-A2##BC148727|EFNA2|1943|ephrin-A2##BC028156|C19orf26|255057|chromosome 19 open reading frame 26##NM_152769|C19orf26|255057|chromosome 19 open reading frame 26	0.0	
chr21	45592664	45592844	reg1036500.p1	3.961	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-39193	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-39249	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-65455	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	68012	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	68103	-	AF194032 NM_013369 NM_175867	89344	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr8	103546930	103547055	reg1034957.p1	3.961	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-122081	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-295819	-	NM_001040630	-409858	-	NM_024410 AK315276 BC104456 BC104457	16869	+	BC011538 NM_001032282 S81439	119100	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	120940	-	AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001040630|NCALD|83988|neurocalcin delta##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10	0.405116	CTCF.p2:-39:0.237
chr10	111968897	111969021	reg1039997.p1	3.960	+	TSC_hg19_v1_chr10_+_111967381 BC035128 NM_130439	-1600	+	AK291488 TSC_hg19_v1_chr10_+_111767988 U37122 BC043143	-200992	+	TSC_hg19_v1_chr10_+_111767741 BX647403 NM_001121 NM_016824 BC062559 BX648016	-201230	+	BC012907 NM_001008541	1029	+	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	16862	+	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	95634	-	BC035128|MXI1|4601|MAX interactor 1##NM_130439|MXI1|4601|MAX interactor 1##AK291488|ADD3|120|adducin 3 (gamma)##U37122|ADD3|120|adducin 3 (gamma)##BC043143|ADD3|120|adducin 3 (gamma)##BX647403|ADD3|120|adducin 3 (gamma)##NM_001121|ADD3|120|adducin 3 (gamma)##NM_016824|ADD3|120|adducin 3 (gamma)##BC062559|ADD3|120|adducin 3 (gamma)##BX648016|ADD3|120|adducin 3 (gamma)##BC012907|MXI1|4601|MAX interactor 1##NM_001008541|MXI1|4601|MAX interactor 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1	0.0	
chr11	68934099	68934197	reg1027317.p1	3.960	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-76622	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-117722	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-117798	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	127474	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	521708	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	521762	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.10674	
chr17	3666706	3666887	reg1036451.p1	3.960	+	TSC_hg19_v1_chr17_+_3627210 AK310546 AK315247 BC036181 NM_031965 AK056691 AB039834 AF289865 BC050662 AK292715 BC016626 BC047457	-39580	+	TSC_hg19_v1_chr17_-_3627077 AF289864	-39694	-	AB209623 BC016917 AK307959 TSC_hg19_v1_chr17_-_3599535 BC008319 AK290889 NM_001204519 NM_001204520 NM_002561 NM_175080	-67204	-	HQ258689 TSC_hg19_v1_chr17_-_3704463	37657	-	TSC_hg19_v1_chr17_-_3704490 BC113436 BC117207 NM_002208	37715	-	TSC_hg19_v1_chr17_-_3749541 NM_001114118 NM_018553	82714	-	BC036181|GSG2|83903|germ cell associated 2 (haspin)##NM_031965|GSG2|83903|germ cell associated 2 (haspin)##AK056691|GSG2|83903|germ cell associated 2 (haspin)##AB039834|GSG2|83903|germ cell associated 2 (haspin)##AF289865|GSG2|83903|germ cell associated 2 (haspin)##BC050662|GSG2|83903|germ cell associated 2 (haspin)##AK292715|GSG2|83903|germ cell associated 2 (haspin)##BC016626|GSG2|83903|germ cell associated 2 (haspin)##BC047457|GSG2|83903|germ cell associated 2 (haspin)##AF289864|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##AB209623|P2RX5-TAX1BP3|100533970|P2RX5-TAX1BP3 readthrough##BC016917|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK307959|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC008319|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK290889|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204519|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204520|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_002561|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_175080|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##HQ258689|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC113436|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC117207|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_002208|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_001114118|C17orf85|55421|chromosome 17 open reading frame 85##NM_018553|C17orf85|55421|chromosome 17 open reading frame 85	0.0	
chr18	5106840	5107020	reg1030751.p2	3.960	+	AK316099 NM_001242761 NM_004746 TSC_hg19_v1_chr18_-_4455271	-651660	-	AK304101 TSC_hg19_v1_chr18_-_4455255	-651677	-	AK294777 AK294717 NM_001242762 NM_001242763	-1232203	-	TSC_hg19_v1_chr18_-_5197257 NM_001145194	90322	-	TSC_hg19_v1_chr18_+_5238098 AK056929 BC041875	131173	+	TSC_hg19_v1_chr18_-_5295610 NM_001243702	188723	-	AK316099|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242761|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_004746|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK304101|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42##NM_001243702|ZFP161|7541|zinc finger protein 161 homolog (mouse)	0.534304	CTCF.p2:-17:0.534
chr19	11669768	11669949	reg1037571.p1	3.960	+	BC022015 NM_001299 AK316406 BC036307 D17408 U37019 TSC_hg19_v1_chr19_+_11649667 AK223234 AK301888 AK313255 S80560 CU692454	-20199	+	BC005119 BC000193 AK131241 TSC_hg19_v1_chr19_-_11639952 BC008279 NM_001142464 NM_001142465 NM_016581	-29901	-	AK314905 NM_001243204	-30179	-	TSC_hg19_v1_chr19_-_11670046 AK097850 NM_032377	175	-	X14618 TSC_hg19_v1_chr19_-_11688461	18593	-	TSC_hg19_v1_chr19_-_11688497 BC025414 J04430	18632	-	BC022015|CNN1|1264|calponin 1, basic, smooth muscle##NM_001299|CNN1|1264|calponin 1, basic, smooth muscle##AK316406|CNN1|1264|calponin 1, basic, smooth muscle##BC036307|CNN1|1264|calponin 1, basic, smooth muscle##D17408|CNN1|1264|calponin 1, basic, smooth muscle##U37019|CNN1|1264|calponin 1, basic, smooth muscle##AK223234|CNN1|1264|calponin 1, basic, smooth muscle##AK301888|CNN1|1264|calponin 1, basic, smooth muscle##AK313255|CNN1|1264|calponin 1, basic, smooth muscle##S80560|CNN1|1264|calponin 1, basic, smooth muscle##BC005119|ECSIT|51295|ECSIT homolog (Drosophila)##BC000193|ECSIT|51295|ECSIT homolog (Drosophila)##BC008279|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001142464|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001142465|ECSIT|51295|ECSIT homolog (Drosophila)##NM_016581|ECSIT|51295|ECSIT homolog (Drosophila)##AK314905|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001243204|ECSIT|51295|ECSIT homolog (Drosophila)##AK097850|ELOF1|84337|elongation factor 1 homolog (S. cerevisiae)##NM_032377|ELOF1|84337|elongation factor 1 homolog (S. cerevisiae)##X14618|ACP5|54|acid phosphatase 5, tartrate resistant##BC025414|ACP5|54|acid phosphatase 5, tartrate resistant##J04430|ACP5|54|acid phosphatase 5, tartrate resistant	0.016678	
chr19	13266756	13266904	reg1037648.p2	3.960	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-2650	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-5538	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-5691	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	350346	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	575749	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	591889	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.0	
chr22	39148073	39148233	reg1034052.p2	3.960	+	TSC_hg19_v1_chr22_+_39101984 EU831484 EU831571 BC014075 AB385030 CR456501 CU013098 CU013386 U87964	-46126	+	NM_004286 TSC_hg19_v1_chr22_+_39101925	-46288	+	CR456923 CU677177 CU013023 CU013311 CR456473 AK291827 BC015026 D31884 TSC_hg19_v1_chr22_-_39096285 NM_014876	-51929	-	AK304188 TSC_hg19_v1_chr22_-_39150957 AK295787	2830	-	BX537962 NM_001199580 TSC_hg19_v1_chr22_-_39151472	3311	-	TSC_hg19_v1_chr22_-_39151986 BC094797	3839	-	EU831484|GTPBP1|9567|GTP binding protein 1##EU831571|GTPBP1|9567|GTP binding protein 1##BC014075|GTPBP1|9567|GTP binding protein 1##CR456501|GTPBP1|9567|GTP binding protein 1##CU013098|GTPBP1|9567|GTP binding protein 1##CU013386|GTPBP1|9567|GTP binding protein 1##U87964|GTPBP1|9567|GTP binding protein 1##NM_004286|GTPBP1|9567|GTP binding protein 1##CR456923|JOSD1|9929|Josephin domain containing 1##CU013023|JOSD1|9929|Josephin domain containing 1##CU013311|JOSD1|9929|Josephin domain containing 1##CR456473|JOSD1|9929|Josephin domain containing 1##AK291827|JOSD1|9929|Josephin domain containing 1##BC015026|JOSD1|9929|Josephin domain containing 1##D31884|JOSD1|9929|Josephin domain containing 1##NM_014876|JOSD1|9929|Josephin domain containing 1##AK304188|SUN2|25777|Sad1 and UNC84 domain containing 2##AK295787|SUN2|25777|Sad1 and UNC84 domain containing 2##BX537962|SUN2|25777|Sad1 and UNC84 domain containing 2##NM_001199580|SUN2|25777|Sad1 and UNC84 domain containing 2##BC094797|SUN2|25777|Sad1 and UNC84 domain containing 2	0.0	
chr3	72539933	72540023	reg1028659.p1	3.960	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-705707	-	AK313656 NM_173359	-736055	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-736456	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	357570	-	BC017274 TSC_hg19_v1_chr3_-_72897575	357597	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	357614	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr4	98831303	98831409	reg1029281.p1	3.960	+	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	-2070098	+	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	-2360980	-	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	-2361177	-	CU691442 BC036870 NM_174952	232989	-	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	351238	+	TSC_hg19_v1_chr4_-_99579781 BC009704 AF065389 AK315723 NM_005723	748403	-	NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC009704|TSPAN5|10098|tetraspanin 5##AF065389|TSPAN5|10098|tetraspanin 5##AK315723|TSPAN5|10098|tetraspanin 5##NM_005723|TSPAN5|10098|tetraspanin 5	0.0	
chr6	160296476	160296567	reg1030273.p1	3.960	+	TSC_hg19_v1_chr6_+_160221313 AK097559 NM_173516 AK093139 AX747947 BC112246	-75178	+	TSC_hg19_v1_chr6_+_160211500 NM_014161 AF161556 BC001623 AL136633 AK292647 AB528185 AM393775 CR533491	-84971	+	TSC_hg19_v1_chr6_+_160210978 AK311391	-85518	+	BC069142 BC069581 BC110454 NM_002377 CU686912 CR542261	31458	+	TSC_hg19_v1_chr6_+_160390137 NM_000876 Y00285 J03528	93612	+	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	246393	+	AK097559|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_173516|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##AK093139|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##BC112246|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_014161|MRPL18|29074|mitochondrial ribosomal protein L18##AF161556|MRPL18|29074|mitochondrial ribosomal protein L18##BC001623|MRPL18|29074|mitochondrial ribosomal protein L18##AL136633|MRPL18|29074|mitochondrial ribosomal protein L18##AM393775|MRPL18|29074|mitochondrial ribosomal protein L18##CR533491|MRPL18|29074|mitochondrial ribosomal protein L18##AK311391|MRPL18|29074|mitochondrial ribosomal protein L18##BC069142|MAS1|4142|MAS1 oncogene##BC069581|MAS1|4142|MAS1 oncogene##BC110454|MAS1|4142|MAS1 oncogene##NM_002377|MAS1|4142|MAS1 oncogene##CR542261|MAS1|4142|MAS1 oncogene##NM_000876|IGF2R|3482|insulin-like growth factor 2 receptor##Y00285|IGF2R|3482|insulin-like growth factor 2 receptor##J03528|IGF2R|3482|insulin-like growth factor 2 receptor##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1	0.0	
chr11	109817263	109817330	reg1030934.p1	3.959	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-524397	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-524453	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-1281482	+	AK095101 TSC_hg19_v1_chr11_+_109963524	146232	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	146834	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	350017	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.0	
chr1	71210982	71211107	reg1039577.p1	3.959	+	TSC_hg19_v1_chr1_+_70876950 NM_001190463 NM_001902 NM_153742 AK310269 AK303946 AK223376 BC015807 S52028 S52784 EU832313 EU832398 BT006882	-334064	+	TSC_hg19_v1_chr1_+_70820493 NM_001031693 NM_001036645 NM_001036646 AF126164 BC010922 AF126163	-390467	+	TSC_hg19_v1_chr1_-_70820406 BC016937 BC028840 AL136717 NM_030816	-390639	-	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	302335	-	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	335663	-	NM_005455 NM_203350	335927	-	NM_001190463|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001902|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_153742|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK310269|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK303946|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK223376|CTH|1491|cystathionase (cystathionine gamma-lyase)##BC015807|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52028|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52784|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832313|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832398|CTH|1491|cystathionase (cystathionine gamma-lyase)##BT006882|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001031693|HHLA3|11147|HERV-H LTR-associating 3##NM_001036645|HHLA3|11147|HERV-H LTR-associating 3##NM_001036646|HHLA3|11147|HERV-H LTR-associating 3##AF126164|HHLA3|11147|HERV-H LTR-associating 3##BC010922|HHLA3|11147|HERV-H LTR-associating 3##AF126163|HHLA3|11147|HERV-H LTR-associating 3##BC016937|ANKRD13C|81573|ankyrin repeat domain 13C##BC028840|ANKRD13C|81573|ankyrin repeat domain 13C##AL136717|ANKRD13C|81573|ankyrin repeat domain 13C##NM_030816|ANKRD13C|81573|ankyrin repeat domain 13C##AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2	0.029106	
chr19	49287986	49288117	reg1033629.p1	3.959	+	AY359086 NM_019113 AB021975 AB590410 DQ891786 DQ894970	-28633	+	D87935 D87936 D87937 NM_000148	-29405	-	AB195682 BC034769 NM_182575 AK301750	-37956	-	AK310243 U68418 CU674922 DQ892350 DQ895554 AF268047 AF268048 TSC_hg19_v1_chr19_-_49314287 BC001900 AK093627 AK309428 AK223522 AK310101 AK314548 NM_001164773 NM_001190	26197	-	AB528622 CU675337 TSC_hg19_v1_chr19_-_49339769 BC006283 BC006294 AK307437 AF126781	51723	-	TSC_hg19_v1_chr19_-_49339923 NM_016246	51872	-	AY359086|FGF21|26291|fibroblast growth factor 21##NM_019113|FGF21|26291|fibroblast growth factor 21##AB021975|FGF21|26291|fibroblast growth factor 21##DQ891786|FGF21|26291|fibroblast growth factor 21##DQ894970|FGF21|26291|fibroblast growth factor 21##D87935|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##D87936|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##D87937|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##NM_000148|FUT1|2523|fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)##AB195682|IZUMO1|284359|izumo sperm-egg fusion 1##BC034769|IZUMO1|284359|izumo sperm-egg fusion 1##NM_182575|IZUMO1|284359|izumo sperm-egg fusion 1##AK301750|IZUMO1|284359|izumo sperm-egg fusion 1##AK310243|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##U68418|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##DQ892350|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##DQ895554|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AF268047|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AF268048|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##BC001900|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK093627|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK309428|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK223522|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK310101|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##AK314548|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##NM_001164773|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##NM_001190|BCAT2|587|branched chain amino-acid transaminase 2, mitochondrial##BC006283|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##BC006294|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AK307437|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##AF126781|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14##NM_016246|HSD17B14|51171|hydroxysteroid (17-beta) dehydrogenase 14	0.170602	
chr20	55968189	55968369	reg1028057.p2	3.959	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-1822	+	NM_001190472	-33402	-	AK292247 AY349350 NM_001015885	-41678	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	131922	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	167878	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	227259	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.398599	CTCF.p2:-88:0.254
chr3	97904153	97904244	reg1028294.p1	3.959	+	NM_001005515	-16655	+	BC136984 NM_001005514	-35999	+	AB528772 NM_001005338	-52658	+	BC137523 BC137524 NM_001005479	78909	+	NM_001005482	97533	+	NM_001005517	168499	+	NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15##BC136984|OR5H14|403273|olfactory receptor, family 5, subfamily H, member 14##NM_001005514|OR5H14|403273|olfactory receptor, family 5, subfamily H, member 14##NM_001005338|OR5H1|26341|olfactory receptor, family 5, subfamily H, member 1##BC137523|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##BC137524|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##NM_001005479|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##NM_001005482|OR5H2|79310|olfactory receptor, family 5, subfamily H, member 2##NM_001005517|OR5K4|403278|olfactory receptor, family 5, subfamily K, member 4	0.037266	
chr7	148232554	148232660	reg1033525.p1	3.959	+	TSC_hg19_v1_chr7_+_148036552 CR933671	-196042	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-2418723	+	NM_014141	-2419155	+	BC021251 NM_145304	55049	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	163333	+	TSC_hg19_v1_chr7_+_148396012 BX537409	163397	+	CR933671|CNTNAP2|26047|contactin associated protein-like 2##AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1##BX537409|CUL1|8454|cullin 1	0.0	
chr7	2760585	2760731	reg1031084.p1	3.959	+	AK289723 AB075830 BC146753 NM_133463	-41500	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-88955	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	-89055	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	123150	-	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	322804	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	580341	+	AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1	0.0	
chr8	119963917	119964091	reg1030925.p1	3.959	+	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	-329797	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	-329879	-	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	-840043	-	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	216	-	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	115465	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	256635	+	NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)	0.248664	CTCF.p2:-28:0.249
chr11	2023739	2023880	reg1018505.p2	3.958	+	TSC_hg19_v1_chr11_-_2019073 AK056774 AK092486 AK309887 AK311497	-4738	-	BC040073 TSC_hg19_v1_chr11_-_2019016	-4798	-	BC002550 TSC_hg19_v1_chr11_-_2018986 BC040852	-4869	-	TSC_hg19_v1_chr11_-_2152963 AF318382	129153	-	TSC_hg19_v1_chr11_-_2156727 AB528666 BT007013 CU674260 DQ892721 DQ895970	132927	-	S51971 TSC_hg19_v1_chr11_-_2158501	134695	-	AK056774|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AK092486|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC040073|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC002550|RPS12|6206|ribosomal protein S12##BC040852|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AF318382|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##BT007013|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ892721|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ895970|IGF2|3481|insulin-like growth factor 2 (somatomedin A)	0.0	
chr14	105646820	105646901	reg1033050.p1	3.958	+	TSC_hg19_v1_chr14_-_105635114 AF029778 AF029779 NM_002226 NM_145159	-11723	-	Y14330 AF003521 AF020201 TSC_hg19_v1_chr14_-_105634835 BC032053	-12069	-	TSC_hg19_v1_chr14_-_105531768 AB465599 AB465600 AK292142 AK303654 AX775935 AX775841	-115087	-	TSC_hg19_v1_chr14_-_105647650 AB087802 HQ257983 BC041584 AK128196 AK310449 NM_177533	734	-	AJ297407 NM_145685	67361	-	TSC_hg19_v1_chr14_+_105714874 NM_033271	68005	+	AF029778|JAG2|3714|jagged 2##AF029779|JAG2|3714|jagged 2##NM_002226|JAG2|3714|jagged 2##NM_145159|JAG2|3714|jagged 2##Y14330|JAG2|3714|jagged 2##AF003521|JAG2|3714|jagged 2##AF020201|JAG2|3714|jagged 2##BC032053|JAG2|3714|jagged 2##AB465599|GPR132|29933|G protein-coupled receptor 132##AB465600|GPR132|29933|G protein-coupled receptor 132##AK292142|GPR132|29933|G protein-coupled receptor 132##AK303654|GPR132|29933|G protein-coupled receptor 132##AX775935|GPR132|29933|G protein-coupled receptor 132##AX775841|GPR132|29933|G protein-coupled receptor 132##AB087802|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##HQ257983|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##BC041584|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AK128196|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##NM_177533|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AJ297407|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_145685|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_033271|BTBD6|90135|BTB (POZ) domain containing 6	0.0	
chr15	79052625	79052802	reg1037798.p1	3.958	+	TSC_hg19_v1_chr15_-_78933573 U62439 Y08416 BC096080 BC096081 BC096082 BC096083 NM_000750 U48861	-119140	-	TSC_hg19_v1_chr15_-_78913532 BC098443 BC006114 NM_000743 NM_001166694	-139141	-	AF385584 Y08418 BT006646 BT006897 CU674246 CU675253 M86383 M37981 TSC_hg19_v1_chr15_-_78913298 BC000513 BC001642 BC002996 U62432	-139480	-	TSC_hg19_v1_chr15_+_79102818 AK095823	50114	+	AY327122 AF140675 TSC_hg19_v1_chr15_-_79103698 BC061631 NM_014272 AK299844	51037	-	TSC_hg19_v1_chr15_+_79165157 NM_006791 NM_206839	112461	+	U62439|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##Y08416|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096080|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096081|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096082|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096083|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##NM_000750|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##U48861|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC098443|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC006114|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_000743|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_001166694|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AF385584|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##Y08418|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006646|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006897|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##M37981|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC000513|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC001642|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC002996|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##U62432|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AK095823|MORF4L1|10933|mortality factor 4 like 1##AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_006791|MORF4L1|10933|mortality factor 4 like 1##NM_206839|MORF4L1|10933|mortality factor 4 like 1	0.889532	CTCF.p2:84:0.890
chr17	73322005	73322084	reg1037016.p1	3.958	+	TSC_hg19_v1_chr17_-_73285501 AK075239 NM_001126121 NM_001126122 NM_021734	-36515	-	BC001075 BC005120 TSC_hg19_v1_chr17_-_73285471 AL833387	-36572	-	TSC_hg19_v1_chr17_-_73267265 AF225422 NM_001242498 NM_020679	-54730	-	AB385058 AF498925 CR450363 CR541942 DQ891830 DQ894923 CU674310 L29511 TSC_hg19_v1_chr17_-_73389844	67733	-	AK091010 TSC_hg19_v1_chr17_-_73401721	79600	-	TSC_hg19_v1_chr17_-_73401738 BC000631	79690	-	AK075239|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126121|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126122|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_021734|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC001075|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC005120|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AL833387|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AF225422|MIF4GD|57409|MIF4G domain containing##NM_001242498|MIF4GD|57409|MIF4G domain containing##NM_020679|MIF4GD|57409|MIF4G domain containing##AF498925|GRB2|2885|growth factor receptor-bound protein 2##CR450363|GRB2|2885|growth factor receptor-bound protein 2##CR541942|GRB2|2885|growth factor receptor-bound protein 2##DQ891830|GRB2|2885|growth factor receptor-bound protein 2##DQ894923|GRB2|2885|growth factor receptor-bound protein 2##L29511|GRB2|2885|growth factor receptor-bound protein 2##AK091010|GRB2|2885|growth factor receptor-bound protein 2##BC000631|GRB2|2885|growth factor receptor-bound protein 2	0.0	
chr1	89202453	89202570	reg1034717.p1	3.958	+	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	-52416	+	TSC_hg19_v1_chr1_+_87797426 BC065818	-1405096	+	TSC_hg19_v1_chr1_+_87797312 AY321514	-1405186	+	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	154700	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	154762	-	TSC_hg19_v1_chr1_-_89458288 AL833593 BC012942 CR627392 AK301326 AK315917 AK057176 AY028624	255848	-	NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##BC065818|LMO4|8543|LIM domain only 4##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB##AL833593|CCBL2|56267|cysteine conjugate-beta lyase 2##BC012942|RBMXL1|494115|RNA binding motif protein, X-linked-like 1##CR627392|CCBL2|56267|cysteine conjugate-beta lyase 2##AK301326|CCBL2|56267|cysteine conjugate-beta lyase 2##AK315917|CCBL2|56267|cysteine conjugate-beta lyase 2##AK057176|CCBL2|56267|cysteine conjugate-beta lyase 2##AY028624|CCBL2|56267|cysteine conjugate-beta lyase 2	0.858291	CTCF.p2:-1:0.858
chr19	39127765	39127880	reg1007504.p2	3.958	+	TSC_hg19_v1_chr19_+_39109863 BC001031 AK026531 AF315506 CU674510	-17945	+	AF109355 TSC_hg19_v1_chr19_+_39109847	-17975	+	TSC_hg19_v1_chr19_+_39109833 AK316344 AK301035 AK289554	-17984	+	TSC_hg19_v1_chr19_+_39138266 NM_004924	10444	+	AK309363 TSC_hg19_v1_chr19_+_39138288	10467	+	TSC_hg19_v1_chr19_+_39138308 U48734	10487	+	BC001031|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK026531|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF315506|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF109355|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK316344|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK301035|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK289554|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##NM_004924|ACTN4|81|actinin, alpha 4##AK309363|ACTN4|81|actinin, alpha 4##U48734|ACTN4|81|actinin, alpha 4	0.0	
chr19	50074685	50074827	reg1034859.p1	3.958	+	TSC_hg19_v1_chr19_+_50031259 AY358423 BC013436	-43495	+	AY195859 NM_020650	-43882	+	TSC_hg19_v1_chr19_+_50016643 AK075510 BC020421 AK299124 AB463631 DQ893544 DQ893808 BT006828	-58124	+	BC047314 TSC_hg19_v1_chr19_-_50083811 BC009299 BC010077 NM_015953 AK092444 AX747549 AK291535 AK300720	9045	-	AF132959 TSC_hg19_v1_chr19_-_50083814	9058	-	NM_000951 BC026032	9851	+	AY358423|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##BC013436|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##AY195859|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##NM_020650|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##AK075510|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BC020421|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##AK299124|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##DQ893544|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##DQ893808|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BT006828|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BC047314|NOSIP|51070|nitric oxide synthase interacting protein##BC009299|NOSIP|51070|nitric oxide synthase interacting protein##BC010077|NOSIP|51070|nitric oxide synthase interacting protein##NM_015953|NOSIP|51070|nitric oxide synthase interacting protein##AK092444|NOSIP|51070|nitric oxide synthase interacting protein##AK291535|NOSIP|51070|nitric oxide synthase interacting protein##AK300720|NOSIP|51070|nitric oxide synthase interacting protein##AF132959|NOSIP|51070|nitric oxide synthase interacting protein##NM_000951|PRRG2|5639|proline rich Gla (G-carboxyglutamic acid) 2##BC026032|PRRG2|5639|proline rich Gla (G-carboxyglutamic acid) 2	0.98931	CTCF.p2:-23:0.989
chr5	173345617	173345774	reg1028308.p2	3.958	+	TSC_hg19_v1_chr5_+_173315343 NM_030627	-30317	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-302022	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-302067	-	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	70495	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	127016	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	127057	+	NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein	0.091342	
chr6	30451600	30451684	reg1028645.p1	3.958	+	TSC_hg19_v1_chr6_+_30312924 NM_001199120 NM_001199121 NM_024839 AF212152 AJ504714 AK026291 BC011730 AJ504713 AJ504715 AJ504716 CU680032	-138678	+	NM_001199119 AB587493 BT007370 CU675745 CU690008	-154552	+	NM_172016 BC034985	-156619	+	NM_005516 AK292391 TSC_hg19_v1_chr6_+_30457288 AK098434 AK225048 AK296822 AK298695 AK300906 AK301125 AK314411 AK316327 BC040479 BC002578 M20022 AB385554 DQ891891 DQ895077 AJ293263 AJ293264 AY216681 AY221103 BC004297 AB209870 M31183	5617	+	TSC_hg19_v1_chr6_-_30523667 AK302480	71976	-	L25665 TSC_hg19_v1_chr6_-_30524034 BT006648 CU676240 DQ890763 DQ893926 DQ896096 BC013959 BC006343 AK026391 AK316391 AK298042 AK293596	72557	-	NM_001199120|RPP21|79897|ribonuclease P/MRP 21kDa subunit##NM_001199121|RPP21|79897|ribonuclease P/MRP 21kDa subunit##NM_024839|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AF212152|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AJ504714|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AK026291|RPP21|79897|ribonuclease P/MRP 21kDa subunit##BC011730|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AJ504713|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AJ504715|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AJ504716|RPP21|79897|ribonuclease P/MRP 21kDa subunit##NM_001199119|TRIM39-RPP21|202658|TRIM39-RPP21 readthrough##BT007370|TRIM39|56658|tripartite motif containing 39##NM_172016|TRIM39|56658|tripartite motif containing 39##BC034985|TRIM39|56658|tripartite motif containing 39##NM_005516|HLA-E|3133|major histocompatibility complex, class I, E##AK292391|HLA-E|3133|major histocompatibility complex, class I, E##AK098434|HLA-E|3133|major histocompatibility complex, class I, E##AK225048|HLA-E|3133|major histocompatibility complex, class I, E##AK296822|HLA-E|3133|major histocompatibility complex, class I, E##AK298695|HLA-E|3133|major histocompatibility complex, class I, E##AK300906|HLA-E|3133|major histocompatibility complex, class I, E##AK301125|HLA-E|3133|major histocompatibility complex, class I, E##AK314411|HLA-E|3133|major histocompatibility complex, class I, E##AK316327|HLA-E|3133|major histocompatibility complex, class I, E##BC040479|HLA-E|3133|major histocompatibility complex, class I, E##BC002578|HLA-E|3133|major histocompatibility complex, class I, E##M20022|HLA-E|3133|major histocompatibility complex, class I, E##DQ891891|HLA-E|3133|major histocompatibility complex, class I, E##DQ895077|HLA-E|3133|major histocompatibility complex, class I, E##AJ293263|HLA-E|3133|major histocompatibility complex, class I, E##AJ293264|HLA-E|3133|major histocompatibility complex, class I, E##AY216681|HLA-E|3133|major histocompatibility complex, class I, E##AY221103|HLA-E|3133|major histocompatibility complex, class I, E##BC004297|HLA-E|3133|major histocompatibility complex, class I, E##AB209870|HLA-E|3133|major histocompatibility complex, class I, E##M31183|HLA-E|3133|major histocompatibility complex, class I, E##AK302480|GNL1|2794|guanine nucleotide binding protein-like 1##L25665|GNL1|2794|guanine nucleotide binding protein-like 1##BT006648|GNL1|2794|guanine nucleotide binding protein-like 1##DQ890763|GNL1|2794|guanine nucleotide binding protein-like 1##DQ893926|GNL1|2794|guanine nucleotide binding protein-like 1##DQ896096|GNL1|2794|guanine nucleotide binding protein-like 1##BC013959|GNL1|2794|guanine nucleotide binding protein-like 1##BC006343|GNL1|2794|guanine nucleotide binding protein-like 1##AK026391|GNL1|2794|guanine nucleotide binding protein-like 1##AK316391|GNL1|2794|guanine nucleotide binding protein-like 1##AK298042|GNL1|2794|guanine nucleotide binding protein-like 1##AK293596|GNL1|2794|guanine nucleotide binding protein-like 1	0.076566	
chr6	4008775	4008899	reg1036397.p1	3.958	+	BC001261 NM_012135 Y18503	-159211	+	NM_183373 TSC_hg19_v1_chr6_-_3752248	-256591	-	TSC_hg19_v1_chr6_-_3720312 BC031944	-288527	-	TSC_hg19_v1_chr6_+_4021647 BC034969 NM_003913 AK291244 AB011108 AF283465 AB385345 AY029347	12752	+	BC039349 NM_173563	70586	-	NM_001085401 BC047663 BC066986	70607	+	BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B##NM_183373|PXDC1|221749|PX domain containing 1##BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##BC039349|C6orf146|222826|chromosome 6 open reading frame 146##NM_173563|C6orf146|222826|chromosome 6 open reading frame 146##NM_001085401|C6orf201|404220|chromosome 6 open reading frame 201##BC047663|C6orf201|404220|chromosome 6 open reading frame 201##BC066986|C6orf201|404220|chromosome 6 open reading frame 201	0.778011	CTCF.p2:-4:0.778
chr10	105426069	105426158	reg1037732.p1	3.957	+	TSC_hg19_v1_chr10_-_105421464 AK294454	-4664	-	AB385330 TSC_hg19_v1_chr10_-_105420936	-5205	-	AK299620 TSC_hg19_v1_chr10_+_105344798	-81346	+	TSC_hg19_v1_chr10_-_105437934 AK304828	11808	-	TSC_hg19_v1_chr10_-_105452931 AK294736 AK295314 AK315983 AK295660	26837	-	TSC_hg19_v1_chr10_-_105615306 NM_014631	189157	-	AK294454|SH3PXD2A|9644|SH3 and PX domains 2A##AK299620|NEURL|9148|neuralized homolog (Drosophila)##AK304828|SH3PXD2A|9644|SH3 and PX domains 2A##AK294736|SH3PXD2A|9644|SH3 and PX domains 2A##AK295314|SH3PXD2A|9644|SH3 and PX domains 2A##AK315983|SH3PXD2A|9644|SH3 and PX domains 2A##AK295660|SH3PXD2A|9644|SH3 and PX domains 2A##NM_014631|SH3PXD2A|9644|SH3 and PX domains 2A	0.998124	CTCF.p2:-27:0.998
chr11	131062146	131062263	reg1037039.p1	3.957	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-275816	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-275859	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-743542	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	178265	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	718420	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	719135	+	NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin	0.0	
chr11	2020231	2020336	reg1008643.p2	3.957	+	TSC_hg19_v1_chr11_-_2019073 AK056774 AK092486 AK309887 AK311497	-1212	-	BC040073 TSC_hg19_v1_chr11_-_2019016	-1272	-	BC002550 TSC_hg19_v1_chr11_-_2018986 BC040852	-1343	-	TSC_hg19_v1_chr11_-_2152963 AF318382	132679	-	TSC_hg19_v1_chr11_-_2156727 AB528666 BT007013 CU674260 DQ892721 DQ895970	136453	-	S51971 TSC_hg19_v1_chr11_-_2158501	138221	-	AK056774|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AK092486|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC040073|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##BC002550|RPS12|6206|ribosomal protein S12##BC040852|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)##AF318382|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##BT007013|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ892721|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##DQ895970|IGF2|3481|insulin-like growth factor 2 (somatomedin A)	0.0	
chr12	51050892	51050958	reg1031394.p1	3.957	+	TSC_hg19_v1_chr12_+_50898778 BC075027	-152026	+	TSC_hg19_v1_chr12_+_50898767 AK091597 AX747083 NM_173602	-152170	+	TSC_hg19_v1_chr12_+_50869532 AF131755	-181338	+	TSC_hg19_v1_chr12_+_51157883 NM_005171 AK313406 BC029619	106953	+	TSC_hg19_v1_chr12_+_51158275 AK299240	107333	+	NM_182559 BC035123 BC048112 CU690554	185798	+	BC075027|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##AK091597|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##NM_173602|DIP2B|57609|DIP2 disco-interacting protein 2 homolog B (Drosophila)##AF131755|LARP4|113251|La ribonucleoprotein domain family, member 4##NM_005171|ATF1|466|activating transcription factor 1##AK313406|ATF1|466|activating transcription factor 1##BC029619|ATF1|466|activating transcription factor 1##AK299240|ATF1|466|activating transcription factor 1##NM_182559|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC035123|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC048112|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12	0.0	
chr13	21100893	21100959	reg1032586.p2	3.957	+	BC119660 BC119661 TSC_hg19_v1_chr13_-_21099959 AF160216 AF077049 AF087898 AK024041 BC071810 NM_015974	-953	-	NM_001110219 NM_001110220 NM_001110221	-294393	-	NM_006783	-295555	-	NM_006531 NM_175605 U20362 TSC_hg19_v1_chr13_+_21141275 BC030776	40315	+	TSC_hg19_v1_chr13_+_21141298 AK300769 AK310223 AK308281 AK303853 BC059357	40380	+	TSC_hg19_v1_chr13_+_21183940 BC039413	83051	+	BC119660|CRYL1|51084|crystallin, lambda 1##BC119661|CRYL1|51084|crystallin, lambda 1##AF160216|CRYL1|51084|crystallin, lambda 1##AF077049|CRYL1|51084|crystallin, lambda 1##AF087898|CRYL1|51084|crystallin, lambda 1##AK024041|CRYL1|51084|crystallin, lambda 1##BC071810|CRYL1|51084|crystallin, lambda 1##NM_015974|CRYL1|51084|crystallin, lambda 1##NM_001110219|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110220|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110221|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006531|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##NM_175605|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##U20362|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC030776|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK300769|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK310223|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK308281|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK303853|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC059357|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)	0.0	
chr1	40618949	40619130	reg1010572.p2	3.957	+	NM_000310 NM_001142604	-55898	-	AK302232 AK310799 TSC_hg19_v1_chr1_-_40562925	-56112	-	TSC_hg19_v1_chr1_-_40562918 BC008426	-56120	-	TSC_hg19_v1_chr1_+_40627044 BC113666 NM_012421	8000	+	TSC_hg19_v1_chr1_+_40627058 AK307662 U22377 X58480	8018	+	TSC_hg19_v1_chr1_+_40627068 HQ258544	8037	+	NM_000310|PPT1|5538|palmitoyl-protein thioesterase 1##NM_001142604|PPT1|5538|palmitoyl-protein thioesterase 1##AK302232|PPT1|5538|palmitoyl-protein thioesterase 1##AK310799|PPT1|5538|palmitoyl-protein thioesterase 1##BC008426|PPT1|5538|palmitoyl-protein thioesterase 1##BC113666|RLF|6018|rearranged L-myc fusion##NM_012421|RLF|6018|rearranged L-myc fusion##AK307662|RLF|6018|rearranged L-myc fusion##U22377|RLF|6018|rearranged L-myc fusion##HQ258544|RLF|6018|rearranged L-myc fusion	0.0	
chr15	79320697	79320826	reg1009899.p1	3.957	+	NM_153815 S62035	-22760	-	TSC_hg19_v1_chr15_-_79237389 AL110099 BC002479 BC018821 AK309491 AK314698 D28436 AK130158 NM_004390	-83362	-	TSC_hg19_v1_chr15_-_79237350 AF426247 AF426248 CR456881 CU677980 DQ890683 DQ893772 AK295583 X16832	-83426	-	L26584 CU691844 AB385192 TSC_hg19_v1_chr15_-_79382954	62138	-	AK290135 TSC_hg19_v1_chr15_-_79383114 BC040275 NM_001145648 NM_002891	62387	-	AK127037 NM_001146341	254384	+	NM_153815|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##S62035|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AL110099|CTSH|1512|cathepsin H##BC002479|CTSH|1512|cathepsin H##BC018821|CTSH|1512|cathepsin H##AK309491|CTSH|1512|cathepsin H##AK314698|CTSH|1512|cathepsin H##D28436|CTSH|1512|cathepsin H##AK130158|CTSH|1512|cathepsin H##NM_004390|CTSH|1512|cathepsin H##AF426247|CTSH|1512|cathepsin H##AF426248|CTSH|1512|cathepsin H##CR456881|CTSH|1512|cathepsin H##DQ890683|CTSH|1512|cathepsin H##DQ893772|CTSH|1512|cathepsin H##X16832|CTSH|1512|cathepsin H##L26584|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK290135|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##BC040275|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_001145648|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_002891|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK127037|ANKRD34C|390616|ankyrin repeat domain 34C##NM_001146341|ANKRD34C|390616|ankyrin repeat domain 34C	0.0	
chr18	42489472	42489626	reg1033421.p2	3.957	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-228681	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-229435	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1632120	-	NM_001242692 AK292422	303403	+	AF349446 NM_007163	705216	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	814555	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.0	
chr18	61997553	61997647	reg1028426.p2	3.957	+	NM_001031848 NM_002640 NM_198833 AK300391 L40377 TSC_hg19_v1_chr18_+_61637345 BC034528 U92984 BX571754 AK313782	-360287	+	NM_001123366	-381013	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	-414856	+	AJ007611 NM_033646	1419887	+	TSC_hg19_v1_chr18_+_63417845 BC036786	1420266	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	1420602	+	NM_001031848|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_002640|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_198833|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK300391|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##L40377|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BC034528|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##U92984|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BX571754|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK313782|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2	0.995328	CTCF.p2:0:0.995
chr2	92004387	92004492	reg1038563.p1	3.957	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-156436	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-1792721	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-1926685	+	AK097438 BC021716 NM_144705 AK296678 CU692394	3532811	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	3687043	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	3783103	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.0	
chr7	102279093	102279273	reg1003787.p2	3.957	+	TSC_hg19_v1_chr7_-_102257205 AK026441 AK310176 NM_001079877 NM_006989 AY029206	-21959	-	HQ258652 BC110873 TSC_hg19_v1_chr7_-_102257170 AB011110 BC113663 BC143584 BC143585 AK308653	-22026	-	AF468111 BC110985 TSC_hg19_v1_chr7_-_102213031 AB209398 BC141857 AK309487 NM_001097615	-66143	-	EU341824 NM_001114403 AK296589	4093	-	AK302217 NM_001031618 NM_001166339	11588	+	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	32937	-	AK026441|RASA4|10156|RAS p21 protein activator 4##AK310176|RASA4|10156|RAS p21 protein activator 4##NM_001079877|RASA4|10156|RAS p21 protein activator 4##NM_006989|RASA4|10156|RAS p21 protein activator 4##HQ258652|RASA4|10156|RAS p21 protein activator 4##BC110873|RASA4|10156|RAS p21 protein activator 4##AB011110|RASA4|10156|RAS p21 protein activator 4##BC113663|RASA4|10156|RAS p21 protein activator 4##BC143584|RASA4|10156|RAS p21 protein activator 4##BC143585|RASA4|10156|RAS p21 protein activator 4##AK308653|RASA4|10156|RAS p21 protein activator 4##AF468111|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AB209398|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_001097615|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##EU341824|UPK3BL|100134938|uroplakin 3B-like##NM_001114403|UPK3BL|100134938|uroplakin 3B-like##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2	0.0	
chr10	112147753	112147934	reg1027865.p1	3.956	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-83143	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-83250	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-162022	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	109908	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	179649	+	AF067163 TSC_hg19_v1_chr10_+_112344155	196272	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.0	
chr11	120805067	120805247	reg1025517.p2	3.956	+	AB384776 NM_014619 S67803	-274130	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-422692	+	BC063117 NM_001198665 NM_015313	-597540	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	89653	+	NM_005422	168217	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	358248	+	NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.0	
chr1	15247287	15247353	reg1033844.p1	3.956	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	-322126	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-1171379	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-1171397	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	3399	+	AY505121 NM_001018001	8975	+	AY505122 NM_001017999	25094	+	AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein	0.0	
chr11	65687317	65687498	reg1024824.p2	3.956	+	TSC_hg19_v1_chr11_+_65686920 BC010025 AB463581 CU679579 EU446936 X96506	-448	+	NM_006442 TSC_hg19_v1_chr11_+_65686745	-668	+	AF073483 TSC_hg19_v1_chr11_-_65686528 BC013185 NM_001135635 NM_031450	-909	-	AK057442 BC104021 BC104022 BC104023 NM_152762	25707	+	NM_005146 TSC_hg19_v1_chr11_+_65729203 AK223016 AK293200 AK297589 AK309104 AK298184 BC001058 AB006198 AF353625 DQ891694 EU176645 BT006637 Y14314	41862	+	TSC_hg19_v1_chr11_+_65769409 AF068235 NM_001143985 NM_003860	82072	+	BC010025|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##EU446936|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##X96506|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##NM_006442|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##AF073483|C11orf68|83638|chromosome 11 open reading frame 68##BC013185|C11orf68|83638|chromosome 11 open reading frame 68##NM_001135635|C11orf68|83638|chromosome 11 open reading frame 68##NM_031450|C11orf68|83638|chromosome 11 open reading frame 68##AK057442|TSGA10IP|254187|testis specific, 10 interacting protein##BC104021|TSGA10IP|254187|testis specific, 10 interacting protein##BC104022|TSGA10IP|254187|testis specific, 10 interacting protein##BC104023|TSGA10IP|254187|testis specific, 10 interacting protein##NM_152762|TSGA10IP|254187|testis specific, 10 interacting protein##NM_005146|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK223016|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK293200|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK297589|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK298184|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BC001058|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AB006198|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AF353625|SART1|9092|squamous cell carcinoma antigen recognized by T cells##DQ891694|SART1|9092|squamous cell carcinoma antigen recognized by T cells##EU176645|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BT006637|SART1|9092|squamous cell carcinoma antigen recognized by T cells##Y14314|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AF068235|BANF1|8815|barrier to autointegration factor 1##NM_001143985|BANF1|8815|barrier to autointegration factor 1##NM_003860|BANF1|8815|barrier to autointegration factor 1	0.044989	
chr1	28471134	28471259	reg1036807.p2	3.956	+	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-56072	-	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-184678	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-209635	+	NM_000952 NM_001164723	32258	-	S52624 AK292053 NM_001164721 NM_001164722	49216	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	88335	-	BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8	0.0	
chr15	96906772	96906862	reg1038686.p1	3.956	+	NM_001145157	-30249	+	AK316086 NM_001145156	-31024	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	-32840	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	419855	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	1597102	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	1597134	+	NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4	0.0	
chr16	68626521	68626627	reg1033622.p1	3.956	+	NM_133458	-52914	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	-53376	+	TSC_hg19_v1_chr16_+_68564035 BC040871	-62541	+	NM_001793	51576	+	TSC_hg19_v1_chr16_+_68679201 AK296968 AK312554 AK225396	52631	+	X63629 TSC_hg19_v1_chr16_+_68679239 AB527800 EU832319 EU832404	52680	+	NM_133458|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##NM_001793|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK296968|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK312554|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##AK225396|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##X63629|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##EU832319|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)##EU832404|CDH3|1001|cadherin 3, type 1, P-cadherin (placental)	0.865979	CTCF.p2:2:0.866
chr17	31848961	31849052	reg1030652.p2	3.956	+	AL834182 NM_183377	-229001	-	AF216311 NM_173847 BC100886 BC100887	-530104	+	TSC_hg19_v1_chr17_+_31255221 AL117619 AK313569 AY358573 BC000526	-593803	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	634681	-	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	733325	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	748267	+	AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##AL117619|TMEM98|26022|transmembrane protein 98##AK313569|TMEM98|26022|transmembrane protein 98##AY358573|TMEM98|26022|transmembrane protein 98##BC000526|TMEM98|26022|transmembrane protein 98##EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7	0.838644	CTCF.p2:0:0.839
chr2	8393421	8393599	reg1025681.p1	3.956	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1335923	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1375647	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1386807	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	428693	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	584209	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	750311	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr5	98086528	98086618	reg1032507.p1	3.956	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-1567586	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-1567631	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	-1567665	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	18468	+	BC054860 BC117134 NM_001270 AF006513	175655	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	1784500	+	NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A	0.01126	
chr7	101948899	101949068	reg1034295.p1	3.956	+	TSC_hg19_v1_chr7_+_101928431 AB000520	-20540	+	TSC_hg19_v1_chr7_+_101928390 NM_020979	-20586	+	M74099 NM_181552	-488102	+	NM_001146210	47905	-	TSC_hg19_v1_chr7_+_102004329 NM_001242713 BC063572 AK098276	55328	+	TSC_hg19_v1_chr7_+_102004338 BC048257 BC066362	55369	+	AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_020979|SH2B2|10603|SH2B adaptor protein 2##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)##NM_001242713|LOC100289561|100289561|uncharacterized LOC100289561##BC063572|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough##AK098276|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough	0.0	
chr7	85459224	85459399	reg1039175.p1	3.956	+	AK309116 TSC_hg19_v1_chr7_-_84816296	-643076	-	NM_152754	-708065	-	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-1634989	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	813914	+	AK291406 TSC_hg19_v1_chr7_+_86273870	814560	+	AK294701 TSC_hg19_v1_chr7_+_86274004 BC022496	814680	+	AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3##AK291406|GRM3|2913|glutamate receptor, metabotropic 3##AK294701|GRM3|2913|glutamate receptor, metabotropic 3##BC022496|GRM3|2913|glutamate receptor, metabotropic 3	0.929003	CTCF.p2:25:0.929
chr20	36619066	36619157	reg1032090.p1	3.955	+	TSC_hg19_v1_chr20_+_36531556 BC033818	-87554	+	NM_080607 AK056177 TSC_hg19_v1_chr20_+_36531528 AL834410	-87595	+	TSC_hg19_v1_chr20_+_36322503 AF370431 AK293420	-296628	+	BC013755 TSC_hg19_v1_chr20_-_36661845 BC013121 NM_014657 AK308164 BC107778	42732	-	TSC_hg19_v1_chr20_+_36661917 NM_021215 DQ372938	42850	+	TSC_hg19_v1_chr20_+_36662168 BC033629 AK312468 BC001696	43056	+	BC033818|VSTM2L|128434|V-set and transmembrane domain containing 2 like##NM_080607|VSTM2L|128434|V-set and transmembrane domain containing 2 like##AK056177|VSTM2L|128434|V-set and transmembrane domain containing 2 like##AL834410|VSTM2L|128434|V-set and transmembrane domain containing 2 like##AF370431|CTNNBL1|56259|catenin, beta like 1##AK293420|CTNNBL1|56259|catenin, beta like 1##BC013755|TTI1|9675|TELO2 interacting protein 1##BC013121|TTI1|9675|TELO2 interacting protein 1##NM_014657|TTI1|9675|TELO2 interacting protein 1##AK308164|TTI1|9675|TELO2 interacting protein 1##BC107778|TTI1|9675|TELO2 interacting protein 1##NM_021215|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##DQ372938|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##BC033629|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##AK312468|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##BC001696|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B	0.0	
chr22	31886529	31886710	reg1035076.p1	3.955	+	TSC_hg19_v1_chr22_-_31885787 BC032941 AK314636 NM_001164502 NM_019843 DQ655937	-772	-	TSC_hg19_v1_chr22_-_31885761 BC012734	-875	-	BC033028 NM_001164501 TSC_hg19_v1_chr22_-_31885678 AF240775	-1012	-	TSC_hg19_v1_chr22_+_31892148 AB011114 NM_001007467 NM_014775	5553	+	BC129926 BC129945 TSC_hg19_v1_chr22_+_31892499 AK303362 AK293987	5822	+	TSC_hg19_v1_chr22_+_31892521 BC110814 AK292408 BC041101	5927	+	BC032941|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##AK314636|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##NM_001164502|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##NM_019843|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##DQ655937|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##BC012734|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##BC033028|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##NM_001164501|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##AF240775|EIF4ENIF1|56478|eukaryotic translation initiation factor 4E nuclear import factor 1##AB011114|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##NM_001007467|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##NM_014775|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC129926|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC129945|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK303362|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK293987|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC110814|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK292408|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC041101|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)	0.0	
chr5	143571750	143571850	reg1027901.p1	3.955	+	AK292477 CR749266 NM_020768	-21385	+	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	-21554	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	-21624	-	TSC_hg19_v1_chr5_-_145214906 BC028175 AK095695 AK125215 NM_182960 NM_205846 BC012033 NM_138492	1643088	-	NM_001080516	1680730	-	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	1744371	+	AK292477|KCTD16|57528|potassium channel tetramerisation domain containing 16##CR749266|KCTD16|57528|potassium channel tetramerisation domain containing 16##NM_020768|KCTD16|57528|potassium channel tetramerisation domain containing 16##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC028175|PRELID2|153768|PRELI domain containing 2##AK095695|PRELID2|153768|PRELI domain containing 2##AK125215|PRELID2|153768|PRELI domain containing 2##NM_182960|PRELID2|153768|PRELI domain containing 2##NM_205846|PRELID2|153768|PRELI domain containing 2##BC012033|PRELID2|153768|PRELI domain containing 2##NM_138492|PRELID2|153768|PRELI domain containing 2##NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2	0.899314	CTCF.p2:6:0.899
chr6	13272927	13273030	reg1033376.p2	3.955	+	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-555935	+	AK295263 TSC_hg19_v1_chr6_+_12716998	-556035	+	TSC_hg19_v1_chr6_+_12514301 D28417	-758676	+	AK091836 AX747210 NM_001242698	22839	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	55722	-	AK027010 NM_001242630	135390	-	AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr6	138111777	138111887	reg1035122.p2	3.955	+	BC051352 AK096362 NM_175747	-296307	-	TSC_hg19_v1_chr6_-_137540556 NM_000416	-571274	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-571287	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	76705	+	TSC_hg19_v1_chr6_-_138189314 AK124173	77518	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	316736	-	BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector	0.0	
chr7	43769235	43769309	reg1039090.p1	3.955	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	-178	-	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	-146578	+	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	-617046	+	TSC_hg19_v1_chr7_+_43798278 NM_000712 NM_001253823 BC005902 BC008456	28995	+	TSC_hg19_v1_chr7_+_43798283 AK291862 X93086 U34877	29044	+	AF161453 CU680250 BC012167 TSC_hg19_v1_chr7_-_43909107 AK054982 BC054865 NM_032014	139844	-	BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44##NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_000712|BLVRA|644|biliverdin reductase A##NM_001253823|BLVRA|644|biliverdin reductase A##BC005902|BLVRA|644|biliverdin reductase A##BC008456|BLVRA|644|biliverdin reductase A##AK291862|BLVRA|644|biliverdin reductase A##X93086|BLVRA|644|biliverdin reductase A##U34877|BLVRA|644|biliverdin reductase A##AF161453|MRPS24|64951|mitochondrial ribosomal protein S24##BC012167|MRPS24|64951|mitochondrial ribosomal protein S24##BC054865|MRPS24|64951|mitochondrial ribosomal protein S24##NM_032014|MRPS24|64951|mitochondrial ribosomal protein S24	0.0	
chr12	102911429	102911496	reg1043166.p2	3.954	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-37080	-	M11568 TSC_hg19_v1_chr12_-_102874344	-37120	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-37140	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	399504	-	TSC_hg19_v1_chr12_-_103311062 BC026251	399601	-	L47726 NM_000277 U49897	399918	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.010649	
chr13	105792492	105792611	reg1031032.p2	3.954	+	NM_000452 U10417	-2073356	-	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-2294065	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-2294297	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	325753	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	326040	+	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	1394798	-	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2	0.0	
chr16	12844015	12844189	reg1031855.p1	3.954	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-773529	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-785018	+	NM_001130007	-833584	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	53549	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	53617	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	151366	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr17	235385	235452	reg1034254.p2	3.954	+	TSC_hg19_v1_chr17_-_202619 NM_001190411 NM_001190412 NM_001190413 NM_006987	-32794	-	TSC_hg19_v1_chr17_-_202589 AK000469 AK291950	-32838	-	NM_001242780 AK054983 BC027928	-54397	+	TSC_hg19_v1_chr17_+_260159 AK128660 NM_001013672 BC141806 BC057385 BC070116 CU687042	24762	+	CU675257 EU021218 EU434648 EU434649 EU434650 AF246287 AY444797 BC006116 TSC_hg19_v1_chr17_-_618080 BC040223 AF318335 AK290343 AK092532 AX747587 NM_001128159 NM_018289	382621	-	TSC_hg19_v1_chr17_+_635806 AF477201 BC026023 AK025935 AK292065 NM_024792 CU693104 AK125146	400368	+	NM_001190411|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190412|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190413|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_006987|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AK000469|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AK291950|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001242780|LOC100506388|100506388|uncharacterized LOC100506388##AK054983|LOC100506388|100506388|uncharacterized LOC100506388##BC027928|LOC100506388|100506388|uncharacterized LOC100506388##AK128660|C17orf97|400566|chromosome 17 open reading frame 97##NM_001013672|C17orf97|400566|chromosome 17 open reading frame 97##BC141806|C17orf97|400566|chromosome 17 open reading frame 97##BC057385|C17orf97|400566|chromosome 17 open reading frame 97##BC070116|C17orf97|400566|chromosome 17 open reading frame 97##EU021218|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434648|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434649|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434650|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF246287|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AY444797|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC006116|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC040223|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF318335|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK290343|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK092532|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_001128159|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_018289|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF477201|FAM57A|79850|family with sequence similarity 57, member A##BC026023|FAM57A|79850|family with sequence similarity 57, member A##AK025935|FAM57A|79850|family with sequence similarity 57, member A##AK292065|FAM57A|79850|family with sequence similarity 57, member A##NM_024792|FAM57A|79850|family with sequence similarity 57, member A##AK125146|FAM57A|79850|family with sequence similarity 57, member A	0.0	
chr19	6527922	6528034	reg1034422.p1	3.954	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-25661	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-46195	-	NM_139161 NM_174881 AK292956 AF503290 AY358684 BC018409 AK000653	-63694	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	3048	+	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	63054	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	63128	-	EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##NM_139161|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_174881|CRB3|92359|crumbs homolog 3 (Drosophila)##AK292956|CRB3|92359|crumbs homolog 3 (Drosophila)##AF503290|CRB3|92359|crumbs homolog 3 (Drosophila)##AY358684|CRB3|92359|crumbs homolog 3 (Drosophila)##BC018409|CRB3|92359|crumbs homolog 3 (Drosophila)##AK000653|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule	0.0	
chr1	995076	995183	reg1029467.p2	3.954	+	TSC_hg19_v1_chr1_+_995109 BC033949	-17	+	TSC_hg19_v1_chr1_+_995079 AK310350	-43	+	TSC_hg19_v1_chr1_+_978666 BC084578	-16407	+	AK296576 NM_001205252	14557	-	AK301998 TSC_hg19_v1_chr1_-_1051470 AK057368 AK124054 AK128434 AK000591 AY358490	56347	-	NM_017891	56606	-	BC033949|LOC100288175|100288175|uncharacterized LOC100288175##AK310350|LOC100288175|100288175|uncharacterized LOC100288175##BC084578|AGRN|375790|agrin##AK296576|RNF223|401934|ring finger protein 223##NM_001205252|RNF223|401934|ring finger protein 223##AK301998|C1orf159|54991|chromosome 1 open reading frame 159##AK057368|C1orf159|54991|chromosome 1 open reading frame 159##AK124054|C1orf159|54991|chromosome 1 open reading frame 159##AK128434|C1orf159|54991|chromosome 1 open reading frame 159##AK000591|C1orf159|54991|chromosome 1 open reading frame 159##AY358490|C1orf159|54991|chromosome 1 open reading frame 159##NM_017891|C1orf159|54991|chromosome 1 open reading frame 159	0.0	
chr4	2489473	2489648	reg1023749.p1	3.954	+	NM_001185009 BC031935	-18380	+	TSC_hg19_v1_chr4_+_2470846 AK312534 AK309509 U95140	-18684	+	TSC_hg19_v1_chr4_+_2470845 AB000468	-18716	+	AB000459 AB000460 AB000461 NM_003704 BC136646 BC144337 BC144339 BC144340	137613	+	AK026176 NM_001161527	268190	-	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	268503	-	NM_001185009|RNF4|6047|ring finger protein 4##BC031935|RNF4|6047|ring finger protein 4##AK312534|RNF4|6047|ring finger protein 4##AK309509|RNF4|6047|ring finger protein 4##U95140|RNF4|6047|ring finger protein 4##AB000468|RNF4|6047|ring finger protein 4##AB000459|FAM193A|8603|family with sequence similarity 193, member A##AB000460|FAM193A|8603|family with sequence similarity 193, member A##AB000461|FAM193A|8603|family with sequence similarity 193, member A##NM_003704|FAM193A|8603|family with sequence similarity 193, member A##BC136646|FAM193A|8603|family with sequence similarity 193, member A##BC144337|FAM193A|8603|family with sequence similarity 193, member A##BC144339|FAM193A|8603|family with sequence similarity 193, member A##BC144340|FAM193A|8603|family with sequence similarity 193, member A##AK026176|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001161527|TNIP2|79155|TNFAIP3 interacting protein 2##AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2	0.0	
chr5	23332920	23333029	reg1032018.p1	3.954	+	L33477 NM_004061	-479244	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-479528	-	TSC_hg19_v1_chr5_-_22212879 AK314800	-1120093	-	DQ388610 NM_020227 AK301776	174769	+	NM_006727	1312110	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	3705697	-	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	0.144424	
chr6	114077113	114077194	reg1034761.p2	3.954	+	AK122906 NM_001013734	-1408622	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1501258	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-1501348	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	101581	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	215119	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	215183	-	AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2	0.0	
chr6	89434869	89435050	reg1032085.p1	3.954	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-559193	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-579923	-	BC029488 NM_030960 AF203447	-677429	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	238232	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	238349	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	238388	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.992545	CTCF.p2:-37:0.993
chr10	18095033	18095129	reg1038286.p1	3.953	+	NM_001098844 BC157856	-53860	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	-243678	+	NM_001098844 BC157856	-300827	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	3312	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	145748	+	NM_201593 NM_201596 NM_201597 S60415 BC136409 AF137376 AF423191 AY393860 AY675091 AK296471 AK311694 AK307526 NM_001167945 NM_201571 NM_201572 AK293837	334626	+	NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	0.0	
chr11	39396780	39396896	reg1034999.p1	3.953	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-2777036	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-2780734	+	NM_000448 M29474	-2807270	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	917756	-	AB046800 NM_020929	918825	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	3936680	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.964372	CTCF.p2:16:0.964
chr12	92839696	92839793	reg1029011.p2	3.953	+	AJ845168 NM_001025232	-17821	-	AJ845165 AJ845166 NM_001025233	-22010	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-300101	-	NM_001037671 NM_001178097	256874	+	NM_001004330 AK128530	290543	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	483194	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr1	53833774	53833946	reg1034427.p1	3.953	+	TSC_hg19_v1_chr1_-_53793743 NM_001018054 NM_004631 NM_017522 NM_033300	-40079	-	Z75190 D50678 BC051836 TSC_hg19_v1_chr1_-_53793738	-40198	-	DQ891289 DQ894473 AB528424 TSC_hg19_v1_chr1_-_53704191 AF035940 BC018211 AK297895 AF067173 AK312113 NM_002370	-129659	-	AK057273 NM_033067 AJ291671	91247	+	AK302085 TSC_hg19_v1_chr1_+_53925533 BC029566	91670	+	AK090634 AX746550 NM_147193	366016	-	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##DQ891289|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##DQ894473|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF035940|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##BC018211|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK297895|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF067173|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK312113|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##NM_002370|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1	0.0	
chr17	75208731	75208856	reg1031836.p2	3.953	+	AK293206 NM_001144001	-27499	+	TSC_hg19_v1_chr17_+_75137104 AK290913 BC142979 BC136523 BC136525	-71658	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	-71759	+	NM_001113491 AF189713 TSC_hg19_v1_chr17_+_75277583 AJ312323 AK300270 AK300268 BC054004	68749	+	AK290368 NM_001113492 TSC_hg19_v1_chr17_+_75283980	75186	+	TSC_hg19_v1_chr17_+_75315629 AJ312321 NM_006640	106817	+	AK293206|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001144001|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AK290913|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC142979|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136523|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136525|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001113491|SEPT9|10801|septin 9##AF189713|SEPT9|10801|septin 9##AJ312323|SEPT9|10801|septin 9##AK300270|SEPT9|10801|septin 9##AK300268|SEPT9|10801|septin 9##BC054004|SEPT9|10801|septin 9##AK290368|SEPT9|10801|septin 9##NM_001113492|SEPT9|10801|septin 9##AJ312321|SEPT9|10801|septin 9##NM_006640|SEPT9|10801|septin 9	0.0	
chr18	42548341	42548458	reg1028179.p1	3.953	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-287531	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-288285	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1690970	-	NM_001242692 AK292422	244553	+	AF349446 NM_007163	646366	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	755705	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.0	
chr2	195732210	195732334	reg1031579.p2	3.953	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-2672643	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	-2672958	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-3020301	-	BC029413 NM_001127257 CR749813	789303	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	789636	+	AB463018 AF327442 AK094515 NM_018897 AB023161	1201223	-	BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7	0.976692	CTCF.p2:5:0.977
chr3	125461756	125461849	reg1013036.p1	3.953	+	TSC_hg19_v1_chr3_-_125314371 NM_022776	-147429	-	TSC_hg19_v1_chr3_-_125239050 NM_003794	-222749	-	AF065485 TSC_hg19_v1_chr3_-_125239047 CU676320 DQ892131 DQ895325 AB528425 AK001835 AK298972 BC018762 BC021002	-222771	-	TSC_hg19_v1_chr3_+_125635451 BC032772 BC041080	173654	+	BC073816 NM_001015050 NM_001195223	194081	-	AF231410 NM_001012337 BC141849 AK302014	226252	+	NM_022776|OSBPL11|114885|oxysterol binding protein-like 11##NM_003794|SNX4|8723|sorting nexin 4##AF065485|SNX4|8723|sorting nexin 4##DQ892131|SNX4|8723|sorting nexin 4##DQ895325|SNX4|8723|sorting nexin 4##AK001835|SNX4|8723|sorting nexin 4##AK298972|SNX4|8723|sorting nexin 4##BC018762|SNX4|8723|sorting nexin 4##BC032772|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC041080|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like##AF231410|ROPN1B|152015|rhophilin associated tail protein 1B##NM_001012337|ROPN1B|152015|rhophilin associated tail protein 1B##BC141849|ROPN1B|152015|rhophilin associated tail protein 1B	0.740157	CTCF.p2:36:0.740
chr3	75670999	75671089	reg1034214.p1	3.953	+	BC043342 BC094682 TSC_hg19_v1_chr3_-_75484194 BC016686 BC068011 BC068108	-186895	-	AB384611 BC150608 NM_020872	-1100742	-	AB384112 BC014432 BC150623 AB029018 BC152417 NM_015009 TSC_hg19_v1_chr3_-_73674093	-1997006	-	AK000525 NM_001124759	42439	+	BC111371 TSC_hg19_v1_chr3_+_75721431 BC039495	50442	+	NM_001128223	163210	-	BC043342|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC094682|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC016686|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068011|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC068108|FAM86DP|692099|family with sequence similarity 86, member D, pseudogene##BC150608|CNTN3|5067|contactin 3 (plasmacytoma associated)##NM_020872|CNTN3|5067|contactin 3 (plasmacytoma associated)##BC014432|PDZRN3|23024|PDZ domain containing ring finger 3##BC150623|PDZRN3|23024|PDZ domain containing ring finger 3##AB029018|PDZRN3|23024|PDZ domain containing ring finger 3##BC152417|PDZRN3|23024|PDZ domain containing ring finger 3##NM_015009|PDZRN3|23024|PDZ domain containing ring finger 3##AK000525|FLJ20518|647476|FSHD region gene 2 family, member C pseudogene##NM_001124759|FRG2C|100288801|FSHD region gene 2 family, member C##BC111371|LOC401074|401074|uncharacterized LOC401074##BC039495|LOC401074|401074|uncharacterized LOC401074##NM_001128223|ZNF717|100131827|zinc finger protein 717	0.39902	CTCF.p2:11:0.399
chr7	111593845	111593937	reg1033550.p1	3.953	+	TSC_hg19_v1_chr7_-_111428948 AK294820	-164880	-	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	-391407	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-862768	+	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	252374	-	TSC_hg19_v1_chr7_-_111846458 AK095906 AK309605 NM_014705	252571	-	AF209198 NM_021994 TSC_hg19_v1_chr7_+_111846702	252781	+	AK294820|DOCK4|9732|dedicator of cytokinesis 4##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4##AK095906|DOCK4|9732|dedicator of cytokinesis 4##AK309605|DOCK4|9732|dedicator of cytokinesis 4##NM_014705|DOCK4|9732|dedicator of cytokinesis 4##AF209198|ZNF277|11179|zinc finger protein 277##NM_021994|ZNF277|11179|zinc finger protein 277	0.888963	CTCF.p2:0:0.889
chrX	46404831	46404958	reg1034410.p1	3.953	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	-38	-	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	-98183	+	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	-1344781	-	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	50	+	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	28384	+	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	213635	-	AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588##NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7	0.0	
chr10	90343063	90343159	reg1033746.p1	3.952	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	-97	-	TSC_hg19_v1_chr10_+_89623420 U96180	-719684	+	TSC_hg19_v1_chr10_+_89623380 BC005821	-719722	+	BC042900 BC031219 NM_001010939	3402	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	81069	+	AB528790 EF426482 NM_001080518	141189	+	BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase##U96180|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric##EF426482|LIPK|643414|lipase, family member K##NM_001080518|LIPK|643414|lipase, family member K	0.994463	CTCF.p2:-10:0.994
chr11	88277461	88277530	reg1002412.p1	3.952	+	TSC_hg19_v1_chr11_-_88070905 BX537913 NM_001114173 NM_001814 NM_148170	-206564	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	-206593	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	-206628	-	AY608336 D28538 D28539 NM_001143831	503644	-	AK291362 NM_000842	519320	-	NM_000372 BC027179 M74314 Y00819 U01873 J03581	633585	+	BX537913|CTSC|1075|cathepsin C##NM_001114173|CTSC|1075|cathepsin C##NM_001814|CTSC|1075|cathepsin C##NM_148170|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AY608336|GRM5|2915|glutamate receptor, metabotropic 5##D28538|GRM5|2915|glutamate receptor, metabotropic 5##D28539|GRM5|2915|glutamate receptor, metabotropic 5##NM_001143831|GRM5|2915|glutamate receptor, metabotropic 5##AK291362|GRM5|2915|glutamate receptor, metabotropic 5##NM_000842|GRM5|2915|glutamate receptor, metabotropic 5##NM_000372|TYR|7299|tyrosinase (oculocutaneous albinism IA)##BC027179|TYR|7299|tyrosinase (oculocutaneous albinism IA)##M74314|TYR|7299|tyrosinase (oculocutaneous albinism IA)##Y00819|TYR|7299|tyrosinase (oculocutaneous albinism IA)##U01873|TYR|7299|tyrosinase (oculocutaneous albinism IA)##J03581|TYR|7299|tyrosinase (oculocutaneous albinism IA)	0.0	
chr12	49514989	49515136	reg1035193.p1	3.952	+	AY358572 AF260728 TSC_hg19_v1_chr12_-_49504681 AK310064 AK310674 NM_018113	-10398	-	BC008337 TSC_hg19_v1_chr12_-_49504631 AK001651 AK298026	-10439	-	CU677167 CU678919 CU689172 DQ892407 DQ895619 TSC_hg19_v1_chr12_-_49504467 BC015015 BC031550 AB033000 AK001356	-10637	-	TSC_hg19_v1_chr12_+_49524671 BC037205	9657	+	BC015883 TSC_hg19_v1_chr12_-_49525141 BC017004 BC008659 K00558	10076	-	BC001128 BC009512 BC009314 BC006379 BC006481 BC010494 BC011572 BC018948 BC021564 BC009509 BC009513 DQ400107 BC000696 BC071904 TSC_hg19_v1_chr12_-_49525179 BC030820 AK026516 AK026632 AK057773 AK094717 AK098357 AK098635 AK098771 AK289354	10109	-	AY358572|LMBR1L|55716|limb region 1 homolog (mouse)-like##AF260728|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK310064|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK310674|LMBR1L|55716|limb region 1 homolog (mouse)-like##NM_018113|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC008337|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK001651|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK298026|LMBR1L|55716|limb region 1 homolog (mouse)-like##DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like##DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like##AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC015883|TUBA1B|10376|tubulin, alpha 1b##BC017004|TUBA1B|10376|tubulin, alpha 1b##BC008659|TUBA1B|10376|tubulin, alpha 1b##K00558|TUBA1B|10376|tubulin, alpha 1b##BC001128|TUBA1B|10376|tubulin, alpha 1b##BC009512|TUBA1B|10376|tubulin, alpha 1b##BC009314|TUBA1B|10376|tubulin, alpha 1b##BC006379|TUBA1B|10376|tubulin, alpha 1b##BC006481|TUBA1B|10376|tubulin, alpha 1b##BC010494|TUBA1B|10376|tubulin, alpha 1b##BC011572|TUBA1B|10376|tubulin, alpha 1b##BC018948|TUBA1B|10376|tubulin, alpha 1b##BC021564|TUBA1B|10376|tubulin, alpha 1b##BC009509|TUBA1B|10376|tubulin, alpha 1b##BC009513|TUBA1B|10376|tubulin, alpha 1b##DQ400107|TUBA1B|10376|tubulin, alpha 1b##BC000696|TUBA1B|10376|tubulin, alpha 1b##BC071904|TUBA1B|10376|tubulin, alpha 1b##BC030820|TUBA1B|10376|tubulin, alpha 1b##AK026516|TUBA1B|10376|tubulin, alpha 1b##AK026632|TUBA1B|10376|tubulin, alpha 1b##AK057773|TUBA1B|10376|tubulin, alpha 1b##AK094717|TUBA1B|10376|tubulin, alpha 1b##AK098357|TUBA1B|10376|tubulin, alpha 1b##AK098635|TUBA1B|10376|tubulin, alpha 1b##AK098771|TUBA1B|10376|tubulin, alpha 1b##AK289354|TUBA1B|10376|tubulin, alpha 1b	0.992443	CTCF.p2:28:0.992
chr13	21066944	21067036	reg1035820.p1	3.952	+	NM_001110219 NM_001110220 NM_001110221	-260457	-	NM_006783	-261619	-	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	-299879	-	BC119660 BC119661 TSC_hg19_v1_chr13_-_21099959 AF160216 AF077049 AF087898 AK024041 BC071810 NM_015974	32983	-	NM_006531 NM_175605 U20362 TSC_hg19_v1_chr13_+_21141275 BC030776	74251	+	TSC_hg19_v1_chr13_+_21141298 AK300769 AK310223 AK308281 AK303853 BC059357	74316	+	NM_001110219|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110220|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110221|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa##AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa##BC119660|CRYL1|51084|crystallin, lambda 1##BC119661|CRYL1|51084|crystallin, lambda 1##AF160216|CRYL1|51084|crystallin, lambda 1##AF077049|CRYL1|51084|crystallin, lambda 1##AF087898|CRYL1|51084|crystallin, lambda 1##AK024041|CRYL1|51084|crystallin, lambda 1##BC071810|CRYL1|51084|crystallin, lambda 1##NM_015974|CRYL1|51084|crystallin, lambda 1##NM_006531|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##NM_175605|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##U20362|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC030776|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK300769|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK310223|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK308281|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK303853|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC059357|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)	0.011799	
chr16	27413508	27413587	reg1032558.p2	3.952	+	AK292663 NM_181078 NM_181079 AK312825	-60	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-72203	+	TSC_hg19_v1_chr16_+_27325301 BC110343 AK223591 X52425	-88229	+	NM_021798 AY358826 AF254067	25057	+	TSC_hg19_v1_chr16_-_27561218 BX648143	147671	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	147684	-	AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BC110343|IL4R|3566|interleukin 4 receptor##AK223591|IL4R|3566|interleukin 4 receptor##X52425|IL4R|3566|interleukin 4 receptor##NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.0	
chr17	62067402	62067470	reg1003971.p1	3.952	+	AY212253 M81758 NM_000334	-17198	-	S52229 S79249 X83539 M80461 BC032651 BC002975 BC030210 AX775815 AX775817 AK222954 AK313583 AK223210 NM_000626 NM_001039933 NM_021602 M89957	-57770	-	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	-71270	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	8326	+	NM_000873 TSC_hg19_v1_chr17_-_62084314	16869	-	TSC_hg19_v1_chr17_-_62097985 AK295382 AK309953 NM_001099786 NM_001099787 NM_001099788 NM_001099789	30546	-	AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##S52229|CD79B|974|CD79b molecule, immunoglobulin-associated beta##S79249|CD79B|974|CD79b molecule, immunoglobulin-associated beta##X83539|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M80461|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC032651|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC002975|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC030210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775815|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775817|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK222954|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK313583|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK223210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_000626|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_001039933|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_021602|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M89957|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##NM_000873|ICAM2|3384|intercellular adhesion molecule 2##AK295382|ICAM2|3384|intercellular adhesion molecule 2##NM_001099786|ICAM2|3384|intercellular adhesion molecule 2##NM_001099787|ICAM2|3384|intercellular adhesion molecule 2##NM_001099788|ICAM2|3384|intercellular adhesion molecule 2##NM_001099789|ICAM2|3384|intercellular adhesion molecule 2	0.0	
chr18	42305812	42305992	reg1034072.p2	3.952	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-45034	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-45788	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1448473	-	NM_001242692 AK292422	487050	+	AF349446 NM_007163	888863	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	998202	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.0	
chr1	954734	954843	reg1031154.p1	3.952	+	NM_005101 TSC_hg19_v1_chr1_+_948876 M13755 BC009507	-5909	+	BC012351 TSC_hg19_v1_chr1_-_935476 NM_001142467 NM_021170	-19278	-	AB048791 DQ895490 TSC_hg19_v1_chr1_-_935444	-19390	-	TSC_hg19_v1_chr1_+_955499 AB191264 NM_198576	708	+	TSC_hg19_v1_chr1_+_955536 AB385240	755	+	AF016903 U84406 TSC_hg19_v1_chr1_+_955679	857	+	NM_005101|ISG15|9636|ISG15 ubiquitin-like modifier##M13755|ISG15|9636|ISG15 ubiquitin-like modifier##BC009507|ISG15|9636|ISG15 ubiquitin-like modifier##BC012351|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_001142467|HES4|57801|hairy and enhancer of split 4 (Drosophila)##NM_021170|HES4|57801|hairy and enhancer of split 4 (Drosophila)##AB048791|HES4|57801|hairy and enhancer of split 4 (Drosophila)##DQ895490|HES4|57801|hairy and enhancer of split 4 (Drosophila)##AB191264|AGRN|375790|agrin##NM_198576|AGRN|375790|agrin##AF016903|AGRN|375790|agrin##U84406|AGRN|375790|agrin	0.267956	CTCF.p2:41:0.268	CTCF.p2:108:0.648
chr4	105614893	105615003	reg1035351.p1	3.952	+	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	-198895	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	-202466	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-974048	-	BX640738 NM_017628	452083	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	452863	+	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	453096	+	AK127778|CXXC4|80319|CXXC finger protein 4##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2	0.28752	CTCF.p2:5:0.288
chr4	38818348	38818423	reg1027682.p2	3.952	+	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	-11966	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	-33786	-	AF289565 TSC_hg19_v1_chr4_-_38666549	-151896	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	40043	-	TSC_hg19_v1_chr4_+_38869390 NM_138389 AK304050 AK296859 AK292831 BC040452	51006	+	BC030803 BC060512 AK026888 NM_024943	215625	-	AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6##NM_138389|FAM114A1|92689|family with sequence similarity 114, member A1##AK304050|FAM114A1|92689|family with sequence similarity 114, member A1##AK296859|FAM114A1|92689|family with sequence similarity 114, member A1##AK292831|FAM114A1|92689|family with sequence similarity 114, member A1##BC040452|FAM114A1|92689|family with sequence similarity 114, member A1##BC030803|TMEM156|80008|transmembrane protein 156##BC060512|TMEM156|80008|transmembrane protein 156##AK026888|TMEM156|80008|transmembrane protein 156##NM_024943|TMEM156|80008|transmembrane protein 156	0.0	
chr6	76641944	76642034	reg1032435.p1	3.952	+	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-182980	+	TSC_hg19_v1_chr6_+_76458926 NM_004999 BX647397 BC012598	-183073	+	AF307849 AB018340 TSC_hg19_v1_chr6_+_76312226 AF306508 AF196304	-329781	+	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	140310	-	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	1531160	-	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	2935266	+	AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_004999|MYO6|4646|myosin VI##BX647397|MYO6|4646|myosin VI##BC012598|MYO6|4646|myosin VI##AF307849|SENP6|26054|SUMO1/sentrin specific peptidase 6##AB018340|SENP6|26054|SUMO1/sentrin specific peptidase 6##AF306508|SENP6|26054|SUMO1/sentrin specific peptidase 6##AF196304|SENP6|26054|SUMO1/sentrin specific peptidase 6##HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1	0.097139	
chr7	5534567	5534748	reg1001378.p2	3.952	+	NM_001080495	-71481	-	AY129022 TSC_hg19_v1_chr7_-_5461555	-73116	-	TSC_hg19_v1_chr7_-_5460842 BC140723	-73751	-	CU692902 TSC_hg19_v1_chr7_-_5553380 AK057042 BC006426 BC024256 NM_024963	18694	-	TSC_hg19_v1_chr7_-_5553435 AK130444 AK294949	18770	-	M28424 V00478 TSC_hg19_v1_chr7_-_5567980 HQ154074 DQ407611 EF036500	33355	-	NM_001080495|TNRC18|84629|trinucleotide repeat containing 18##AY129022|TNRC18|84629|trinucleotide repeat containing 18##AK057042|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC006426|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC024256|FBXL18|80028|F-box and leucine-rich repeat protein 18##NM_024963|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK130444|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK294949|FBXL18|80028|F-box and leucine-rich repeat protein 18##M28424|ACTB|60|actin, beta##V00478|ACTB|60|actin, beta##DQ407611|ACTB|60|actin, beta##EF036500|ACTB|60|actin, beta	0.0	
chrX	94215962	94216073	reg1033735.p1	3.952	+	NM_001171109 NM_001171110 NM_001171111 NM_173698	-1287006	+	AK090772 D50370 TSC_hg19_v1_chrX_-_92928576 BC034954 AK315176 AK223621 BC094729 AK095682 NM_004538	-1287394	-	AJ564931 NM_001168360 NM_001168361 NM_001168362 NM_001168363 AF206516 AF217288 AY861432 AY861433 AY861434 AY861435	-3125536	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	1723734	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	1723937	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	1922953	+	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A##NM_001171110|FAM133A|286499|family with sequence similarity 133, member A##NM_001171111|FAM133A|286499|family with sequence similarity 133, member A##NM_173698|FAM133A|286499|family with sequence similarity 133, member A##AK090772|NAP1L3|4675|nucleosome assembly protein 1-like 3##D50370|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC034954|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK315176|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK223621|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC094729|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK095682|NAP1L3|4675|nucleosome assembly protein 1-like 3##NM_004538|NAP1L3|4675|nucleosome assembly protein 1-like 3##AJ564931|PCDH11X|27328|protocadherin 11 X-linked##NM_001168360|PCDH11X|27328|protocadherin 11 X-linked##NM_001168361|PCDH11X|27328|protocadherin 11 X-linked##NM_001168362|PCDH11X|27328|protocadherin 11 X-linked##NM_001168363|PCDH11X|27328|protocadherin 11 X-linked##AF206516|PCDH11X|27328|protocadherin 11 X-linked##AF217288|PCDH11X|27328|protocadherin 11 X-linked##AY861432|PCDH11X|27328|protocadherin 11 X-linked##AY861433|PCDH11X|27328|protocadherin 11 X-linked##AY861434|PCDH11X|27328|protocadherin 11 X-linked##AY861435|PCDH11X|27328|protocadherin 11 X-linked##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa	0.194267	
chr1	101972244	101972355	reg1030772.p1	3.951	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-269729	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-269918	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-480866	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	490188	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	490491	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1524484	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.995575	CTCF.p2:1:0.996
chr12	4827135	4827274	reg1035319.p1	3.951	+	TSC_hg19_v1_chr12_+_4758272 NM_005002 BC015837 AF050641 AK308588 BC009311 AK291067 BC111546 L04490	-68926	+	TSC_hg19_v1_chr12_-_4758185 AK292451	-69008	-	AF087003 U85715 BC047535 AF093408 NM_006422	-72896	-	AJ271385 NM_017417 BC140888 BC140889	2564	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	91211	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	191856	+	NM_005002|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC015837|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AF050641|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK308588|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC009311|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK291067|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC111546|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##L04490|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK292451|AKAP3|10566|A kinase (PRKA) anchor protein 3##AF087003|AKAP3|10566|A kinase (PRKA) anchor protein 3##U85715|AKAP3|10566|A kinase (PRKA) anchor protein 3##BC047535|AKAP3|10566|A kinase (PRKA) anchor protein 3##AF093408|AKAP3|10566|A kinase (PRKA) anchor protein 3##NM_006422|AKAP3|10566|A kinase (PRKA) anchor protein 3##AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)	0.932478	CTCF.p2:-53:0.932
chr1	38618524	38618657	reg1038290.p1	3.951	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-106141	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-140160	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-140205	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	706796	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	720426	-	AK312811 BC051675 AK123051 NM_030772	728687	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.056799	
chr14	75651007	75651167	reg1034777.p1	3.951	+	TSC_hg19_v1_chr14_-_75643341 NM_006827	-7735	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	-7754	-	TSC_hg19_v1_chr14_-_75643322 AK296800 AK312384	-7767	-	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	94495	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	243554	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	243926	+	NM_006827|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK296800|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK312384|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2	0.0	
chr15	48293999	48294113	reg1034436.p1	3.951	+	AF389426 AF389427 AF389428 AF389429 AF389430 NM_020858 NM_024966 NM_153616 NM_153617 NM_153618 NM_153619	-283371	+	TSC_hg19_v1_chr15_+_48009541 AK290032	-284468	+	TSC_hg19_v1_chr15_+_47476294 AB040912 BC150253 NM_001198999	-817669	+	AF348468 NM_205850 BC110836 BC113628 BC113630 BC143950 DQ665306 DQ665307 HQ258279	119148	+	AF190159 TSC_hg19_v1_chr15_-_48470320 AF106685	176273	-	TSC_hg19_v1_chr15_-_48470503 AB037762 BC152420 BC152451 BC068523 AK023133 NM_016132	176461	-	AF389426|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389427|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389428|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389429|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF389430|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_020858|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_024966|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153616|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153617|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153618|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_153619|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AK290032|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AB040912|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##BC150253|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##NM_001198999|SEMA6D|80031|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D##AF348468|SLC24A5|283652|solute carrier family 24, member 5##NM_205850|SLC24A5|283652|solute carrier family 24, member 5##BC113628|SLC24A5|283652|solute carrier family 24, member 5##BC113630|SLC24A5|283652|solute carrier family 24, member 5##BC143950|SLC24A5|283652|solute carrier family 24, member 5##DQ665306|SLC24A5|283652|solute carrier family 24, member 5##DQ665307|SLC24A5|283652|solute carrier family 24, member 5##HQ258279|SLC24A5|283652|solute carrier family 24, member 5##AF190159|MYEF2|50804|myelin expression factor 2##AF106685|MYEF2|50804|myelin expression factor 2##AB037762|MYEF2|50804|myelin expression factor 2##BC152420|MYEF2|50804|myelin expression factor 2##BC152451|MYEF2|50804|myelin expression factor 2##BC068523|MYEF2|50804|myelin expression factor 2##AK023133|MYEF2|50804|myelin expression factor 2##NM_016132|MYEF2|50804|myelin expression factor 2	0.065178	
chr19	11770576	11770681	reg1037993.p1	3.951	+	NM_145295 BC098416 AK095639 BC006279 AK074846 BC069232	-62337	+	BC111014 TSC_hg19_v1_chr19_-_11689776 AK307164 NM_001111035 NM_001111036	-80846	-	AK225912 NM_001111034	-81037	-	X51760 BC052597 AK308189 NM_001080493 AK300579 AK303213	79130	-	NM_152355 TSC_hg19_v1_chr19_+_11877884 AK095956	107232	+	AK297479 NM_152356 AK096593	138751	+	NM_145295|ZNF627|199692|zinc finger protein 627##BC098416|ZNF627|199692|zinc finger protein 627##AK095639|ZNF627|199692|zinc finger protein 627##BC006279|ZNF627|199692|zinc finger protein 627##AK074846|ZNF627|199692|zinc finger protein 627##BC069232|ZNF627|199692|zinc finger protein 627##BC111014|ACP5|54|acid phosphatase 5, tartrate resistant##AK307164|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111035|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111036|ACP5|54|acid phosphatase 5, tartrate resistant##AK225912|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111034|ACP5|54|acid phosphatase 5, tartrate resistant##X51760|ZNF823|55552|zinc finger protein 823##BC052597|ZNF823|55552|zinc finger protein 823##AK308189|ZNF823|55552|zinc finger protein 823##NM_001080493|ZNF823|55552|zinc finger protein 823##AK300579|ZNF823|55552|zinc finger protein 823##AK303213|ZNF823|55552|zinc finger protein 823##NM_152355|ZNF441|126068|zinc finger protein 441##AK095956|ZNF441|126068|zinc finger protein 441##AK297479|ZNF491|126069|zinc finger protein 491##NM_152356|ZNF491|126069|zinc finger protein 491##AK096593|ZNF491|126069|zinc finger protein 491	0.847315	CTCF.p2:-2:0.847
chr19	39423543	39423683	reg1034419.p2	3.951	+	TSC_hg19_v1_chr19_+_39421608 NM_021107 NM_033363 Y11681 BC007499 BC001617	-2010	+	NM_033362	-2266	+	TSC_hg19_v1_chr19_-_39421404 AB527892 CU692126 BC042912 AK296152 AK293414 AK000457 AK296170 AB029948 NM_001145901 NM_017827	-2306	-	AK057934 NM_148169	19713	-	BC012385 AF386743 NM_024907	42721	-	CU677033 TSC_hg19_v1_chr19_-_39522905	99286	-	NM_021107|MRPS12|6183|mitochondrial ribosomal protein S12##NM_033363|MRPS12|6183|mitochondrial ribosomal protein S12##Y11681|MRPS12|6183|mitochondrial ribosomal protein S12##BC007499|MRPS12|6183|mitochondrial ribosomal protein S12##BC001617|MRPS12|6183|mitochondrial ribosomal protein S12##NM_033362|MRPS12|6183|mitochondrial ribosomal protein S12##BC042912|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK296152|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK293414|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK000457|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK296170|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AB029948|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##NM_001145901|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##NM_017827|SARS2|54938|seryl-tRNA synthetase 2, mitochondrial##AK057934|FBXO17|115290|F-box protein 17##NM_148169|FBXO17|115290|F-box protein 17##BC012385|FBXO17|115290|F-box protein 17##AF386743|FBXO17|115290|F-box protein 17##NM_024907|FBXO17|115290|F-box protein 17	0.999299	CTCF.p2:0:0.999
chr2	160945016	160945137	reg1038307.p2	3.951	+	U17033 U17034 NM_001007267 NM_001195641 NM_007366 TSC_hg19_v1_chr2_-_160919148	-25941	-	BC140823 BC144631 TSC_hg19_v1_chr2_-_160919021	-26097	-	NM_001198759 NM_001198760 NM_002349 TSC_hg19_v1_chr2_-_160761270	-183786	-	AB463075 AM393800 M35198 NM_000888 BC121178 BC143656	111511	-	AK304203 AL831998 TSC_hg19_v1_chr2_-_161056784 AK290300 AK313944	111719	-	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	185113	-	U17033|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##U17034|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001007267|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001195641|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_007366|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC140823|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC144631|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001198759|LY75-CD302|100526664|LY75-CD302 readthrough##NM_001198760|LY75-CD302|100526664|LY75-CD302 readthrough##NM_002349|LY75|4065|lymphocyte antigen 75##AM393800|ITGB6|3694|integrin, beta 6##M35198|ITGB6|3694|integrin, beta 6##NM_000888|ITGB6|3694|integrin, beta 6##BC121178|ITGB6|3694|integrin, beta 6##BC143656|ITGB6|3694|integrin, beta 6##AK304203|ITGB6|3694|integrin, beta 6##AL831998|ITGB6|3694|integrin, beta 6##AK290300|ITGB6|3694|integrin, beta 6##AK313944|ITGB6|3694|integrin, beta 6##BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	0.939688	CTCF.p2:-16:0.940
chr3	121721989	121722101	reg1032780.p1	3.951	+	NM_001145998 NM_021082 AK289820 AK296895 AK302002 AK304189 BC020743 BC044572 BC038445 S78203	-108813	+	AF217516 NM_018456 TSC_hg19_v1_chr3_+_121554083 BC014589 AY049020 BC014209 AF517829 AK301560 AB528527 CU676923 DQ892648 DQ895887	-167965	+	TSC_hg19_v1_chr3_-_121553908 AB062481 AY714228 NM_001023570 NM_001023571	-168118	-	AY672837 AY672839 BC044240 AY134857 TSC_hg19_v1_chr3_-_121741095 AK129974 NM_001199799 NM_001199800 NM_175924	19002	-	NM_001206924 NM_001206925 NM_175862 AK294663 AK301237 AK316203 BC040261 L25259 AK291497 AK313103	52209	+	NM_006889 NM_176892 U04343	74677	+	NM_001145998|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##NM_021082|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK289820|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK296895|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK302002|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK304189|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC020743|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC044572|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC038445|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##S78203|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AF217516|EAF2|55840|ELL associated factor 2##NM_018456|EAF2|55840|ELL associated factor 2##BC014589|EAF2|55840|ELL associated factor 2##AY049020|EAF2|55840|ELL associated factor 2##BC014209|EAF2|55840|ELL associated factor 2##AF517829|EAF2|55840|ELL associated factor 2##AK301560|EAF2|55840|ELL associated factor 2##DQ892648|EAF2|55840|ELL associated factor 2##DQ895887|EAF2|55840|ELL associated factor 2##AB062481|IQCB1|9657|IQ motif containing B1##AY714228|IQCB1|9657|IQ motif containing B1##NM_001023570|IQCB1|9657|IQ motif containing B1##NM_001023571|IQCB1|9657|IQ motif containing B1##AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1##BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199799|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199800|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001206924|CD86|942|CD86 molecule##NM_001206925|CD86|942|CD86 molecule##NM_175862|CD86|942|CD86 molecule##AK294663|CD86|942|CD86 molecule##AK301237|CD86|942|CD86 molecule##AK316203|CD86|942|CD86 molecule##BC040261|CD86|942|CD86 molecule##L25259|CD86|942|CD86 molecule##AK291497|CD86|942|CD86 molecule##AK313103|CD86|942|CD86 molecule##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule	0.0	
chr3	4872683	4872854	reg1024399.p1	3.951	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-337572	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-337640	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-337737	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	148348	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	148413	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	148586	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.0	
chr4	147166047	147166138	reg1033725.p1	3.951	+	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	-69225	+	BC033879 TSC_hg19_v1_chr4_-_146859976	-306124	-	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	-306415	-	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	276904	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	393999	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	700906	-	NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29	0.0	
chr4	154389929	154390017	reg1031173.p2	3.951	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-2481	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-124098	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-124186	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	215425	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	215457	+	TSC_hg19_v1_chr4_+_154605441 BC033756	215491	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.0	
chr7	151323649	151323766	reg1037164.p2	3.951	+	TSC_hg19_v1_chr7_-_151216982 BC107705 AK125446 BC016155 NM_005614	-106722	-	TSC_hg19_v1_chr7_-_151216769 BC066307	-106938	-	TSC_hg19_v1_chr7_-_151216740 AK289370 AF148645	-106989	-	TSC_hg19_v1_chr7_-_151329284 BT007127 BC020540 AB025580 AF087875 AK314646 AK001887 NM_024429	5573	-	BC068598 TSC_hg19_v1_chr7_-_151511929 NM_001040633	188233	-	AK074675 NM_016203	250555	-	BC107705|RHEB|6009|Ras homolog enriched in brain##AK125446|RHEB|6009|Ras homolog enriched in brain##BC016155|RHEB|6009|Ras homolog enriched in brain##NM_005614|RHEB|6009|Ras homolog enriched in brain##BC066307|RHEB|6009|Ras homolog enriched in brain##AK289370|RHEB|6009|Ras homolog enriched in brain##AF148645|RHEB|6009|Ras homolog enriched in brain##BT007127|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC020540|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AB025580|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AF087875|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK314646|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK001887|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_024429|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC068598|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_001040633|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK074675|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_016203|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit	0.968786	CTCF.p2:-1:0.969
chr8	19991227	19991325	reg1011667.p1	3.951	+	TSC_hg19_v1_chr8_+_19796933 AB384743 BT006726 CR457054 DQ893541 DQ893751	-194336	+	X14390 TSC_hg19_v1_chr8_+_19796864 BC011353	-194411	+	TSC_hg19_v1_chr8_+_19796763 AK092286 AK290290 AK222464 AK312311 M15856 X54516	-194507	+	AK313720 BC006317 BC009387 NM_001135691 NM_001142324 NM_001142325 NM_003053 U39905	49388	-	NM_001693 TSC_hg19_v1_chr8_+_20054882	63516	+	TSC_hg19_v1_chr8_+_20054891 AK294163 BC030640 AK312372	63617	+	BT006726|LPL|4023|lipoprotein lipase##CR457054|LPL|4023|lipoprotein lipase##DQ893541|LPL|4023|lipoprotein lipase##DQ893751|LPL|4023|lipoprotein lipase##X14390|LPL|4023|lipoprotein lipase##BC011353|LPL|4023|lipoprotein lipase##AK092286|LPL|4023|lipoprotein lipase##AK290290|LPL|4023|lipoprotein lipase##AK222464|LPL|4023|lipoprotein lipase##AK312311|LPL|4023|lipoprotein lipase##M15856|LPL|4023|lipoprotein lipase##X54516|LPL|4023|lipoprotein lipase##AK313720|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##BC006317|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##BC009387|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001135691|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001142324|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001142325|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_003053|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##U39905|SLC18A1|6570|solute carrier family 18 (vesicular monoamine), member 1##NM_001693|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK294163|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##BC030640|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2##AK312372|ATP6V1B2|526|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2	0.998368	
chr9	132749473	132749654	reg1030243.p2	3.951	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-151798	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-151841	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-151879	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	55791	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	55925	-	BC039728 NM_001136557 NM_001136558 NM_020960	66421	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr10	76437847	76437982	reg1034530.p1	3.950	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-501327	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-501384	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-501432	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	148440	+	AY686755 NM_001003892 BC137321 BC137322	380391	-	AB027004 AB103375 NM_016364	421333	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr1	14926433	14926583	reg1034426.p1	3.950	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	-1314	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-850567	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-850585	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	324211	+	AY505121 NM_001018001	329787	+	AY505122 NM_001017999	345906	+	AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein	0.0	
chr12	133065259	133065357	reg1032031.p1	3.950	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-159451	-	AF458594 NM_021808	-374736	-	TSC_hg19_v1_chr12_+_132629014 BC071958 CU687200 DQ892518 DQ895730 BC007893	-436252	+	NM_001142641	1848	+	NM_001195520	121728	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	130096	+	BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC071958|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ892518|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ895730|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC007893|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##NM_001142641|FBRSL1|57666|fibrosin-like 1##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2	0.0	
chr1	2343633	2343738	reg1032239.p1	3.950	+	TSC_hg19_v1_chr1_+_2323292 AF091071	-20375	+	TSC_hg19_v1_chr1_+_2323280 BC004965 AK289658	-20403	+	TSC_hg19_v1_chr1_+_2323265 NM_007033 AF157324	-20450	+	CR542077 DQ891961 DQ895151 TSC_hg19_v1_chr1_-_2343983 BC000543 AF060502 AK124816 BC018198	283	-	TSC_hg19_v1_chr1_-_2344008 AB013818 NM_002617 NM_153818	327	-	DQ176850 NM_014638 BC144620	64072	+	AF091071|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##BC004965|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##AK289658|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##NM_007033|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##AF157324|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##CR542077|PEX10|5192|peroxisomal biogenesis factor 10##DQ891961|PEX10|5192|peroxisomal biogenesis factor 10##DQ895151|PEX10|5192|peroxisomal biogenesis factor 10##BC000543|PEX10|5192|peroxisomal biogenesis factor 10##AF060502|PEX10|5192|peroxisomal biogenesis factor 10##AK124816|PEX10|5192|peroxisomal biogenesis factor 10##BC018198|PEX10|5192|peroxisomal biogenesis factor 10##AB013818|PEX10|5192|peroxisomal biogenesis factor 10##NM_002617|PEX10|5192|peroxisomal biogenesis factor 10##NM_153818|PEX10|5192|peroxisomal biogenesis factor 10##DQ176850|PLCH2|9651|phospholipase C, eta 2##NM_014638|PLCH2|9651|phospholipase C, eta 2##BC144620|PLCH2|9651|phospholipase C, eta 2	0.0	
chr12	8976266	8976368	reg1034579.p2	3.950	+	NM_144670 AK122624 AK290355 AL832139 BX648231	-1135	+	TSC_hg19_v1_chr12_+_8850570 AK302847 NM_020734 BC006368	-125713	+	AK124368 TSC_hg19_v1_chr12_-_8815486	-160835	-	TSC_hg19_v1_chr12_+_9067153 AB209063 AK293893 NM_004426 BC073964 U89277 BC157850	90952	+	TSC_hg19_v1_chr12_-_9102242 AK291143 M16985 AK222792 BC024206 AK312689	125901	-	TSC_hg19_v1_chr12_-_9102262 NM_001207024 NM_002355	125992	-	NM_144670|A2ML1|144568|alpha-2-macroglobulin-like 1##AK122624|A2ML1|144568|alpha-2-macroglobulin-like 1##AK290355|A2ML1|144568|alpha-2-macroglobulin-like 1##AL832139|A2ML1|144568|alpha-2-macroglobulin-like 1##BX648231|A2ML1|144568|alpha-2-macroglobulin-like 1##AK302847|RIMKLB|57494|ribosomal modification protein rimK-like family member B##NM_020734|RIMKLB|57494|ribosomal modification protein rimK-like family member B##BC006368|RIMKLB|57494|ribosomal modification protein rimK-like family member B##AK124368|MFAP5|8076|microfibrillar associated protein 5##AB209063|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##AK293893|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##NM_004426|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC073964|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##U89277|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC157850|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##AK291143|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##M16985|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK222792|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##BC024206|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK312689|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##NM_001207024|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##NM_002355|M6PR|4074|mannose-6-phosphate receptor (cation dependent)	0.69843	CTCF.p2:10:0.607
chr20	31044746	31044889	reg1014790.p1	3.950	+	TSC_hg19_v1_chr20_+_31037448 AL080086	-7315	+	AB023195 TSC_hg19_v1_chr20_+_31017235	-27606	+	TSC_hg19_v1_chr20_+_30946787 AK122923	-97991	+	AK056286 TSC_hg19_v1_chr20_-_31071290 NM_080616	26448	-	BC038088 TSC_hg19_v1_chr20_-_31071385	26574	-	BC023657 BC065483 TSC_hg19_v1_chr20_-_31172902	128106	-	AB023195|ASXL1|171023|additional sex combs like 1 (Drosophila)##AK122923|ASXL1|171023|additional sex combs like 1 (Drosophila)##AK056286|C20orf112|140688|chromosome 20 open reading frame 112##NM_080616|C20orf112|140688|chromosome 20 open reading frame 112##BC038088|C20orf112|140688|chromosome 20 open reading frame 112##BC023657|LOC284804|284804|uncharacterized LOC284804##BC065483|LOC284804|284804|uncharacterized LOC284804	0.0	
chr21	37522560	37522627	reg1031711.p1	3.950	+	AB041012 NM_001236 AB124847 TSC_hg19_v1_chr21_+_37507383 AK223429 BC002812 AB004854 CR541709	-15244	+	TSC_hg19_v1_chr21_+_37442321 AK294142 J04056 AK308691 AK311219 BC015640 AK314879 BC002511 DQ892353 DQ895559 BT019843 CR541708	-80238	+	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	-80340	+	TSC_hg19_v1_chr21_-_37528616 AB004851 BC037580 BC047014	6038	-	AJ237839 NM_005128	14245	+	TSC_hg19_v1_chr21_+_37692548 BC058002 NM_015358 AK295133 BC007311 D50926 BC094779 BC132731 BC144116 AK292957 AB489143	169926	+	AB041012|CBR3|874|carbonyl reductase 3##NM_001236|CBR3|874|carbonyl reductase 3##AB124847|CBR3|874|carbonyl reductase 3##AK223429|CBR3|874|carbonyl reductase 3##BC002812|CBR3|874|carbonyl reductase 3##AB004854|CBR3|874|carbonyl reductase 3##CR541709|CBR3|874|carbonyl reductase 3##AK294142|CBR1|873|carbonyl reductase 1##J04056|CBR1|873|carbonyl reductase 1##AK308691|CBR1|873|carbonyl reductase 1##AK311219|CBR1|873|carbonyl reductase 1##BC015640|CBR1|873|carbonyl reductase 1##AK314879|CBR1|873|carbonyl reductase 1##BC002511|CBR1|873|carbonyl reductase 1##DQ892353|CBR1|873|carbonyl reductase 1##DQ895559|CBR1|873|carbonyl reductase 1##BT019843|CBR1|873|carbonyl reductase 1##CR541708|CBR1|873|carbonyl reductase 1##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1##AB004851|LOC100506428|100506428|uncharacterized LOC100506428##BC037580|LOC100506428|100506428|uncharacterized LOC100506428##BC047014|LOC100506428|100506428|uncharacterized LOC100506428##AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2##BC058002|MORC3|23515|MORC family CW-type zinc finger 3##NM_015358|MORC3|23515|MORC family CW-type zinc finger 3##AK295133|MORC3|23515|MORC family CW-type zinc finger 3##BC007311|MORC3|23515|MORC family CW-type zinc finger 3##D50926|MORC3|23515|MORC family CW-type zinc finger 3##BC094779|MORC3|23515|MORC family CW-type zinc finger 3##BC132731|MORC3|23515|MORC family CW-type zinc finger 3##BC144116|MORC3|23515|MORC family CW-type zinc finger 3##AK292957|MORC3|23515|MORC family CW-type zinc finger 3	0.096603	
chr2	165394919	165395026	reg1039561.p1	3.950	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	-802455	-	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-1699725	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-1699848	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	30032	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	82921	-	TSC_hg19_v1_chr2_-_165477987 AK307744 AK313153	83021	-	BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14##AK307744|GRB14|2888|growth factor receptor-bound protein 14##AK313153|GRB14|2888|growth factor receptor-bound protein 14	0.520899	CTCF.p2:-10:0.521
chr6	7236682	7236823	reg1031521.p1	3.950	+	BX647723 TSC_hg19_v1_chr6_+_7108910	-127849	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	-128529	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	-128717	+	BT007387 CR456961 AB464204 DQ892751 EU176743 TSC_hg19_v1_chr6_-_7313433 Z12830 AK075562 AK222762 AK222809 AK291550 AK312653 CR936719 BC007710 NM_003144	76694	-	AF414185 NM_001170692 NM_001170693 NM_205864 TSC_hg19_v1_chr6_-_7389974	153215	-	TSC_hg19_v1_chr6_+_7390042 AY094356 AK314467 BC006104 NM_031480 AK054568	153346	+	BX647723|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##BT007387|SSR1|6745|signal sequence receptor, alpha##CR456961|SSR1|6745|signal sequence receptor, alpha##DQ892751|SSR1|6745|signal sequence receptor, alpha##EU176743|SSR1|6745|signal sequence receptor, alpha##Z12830|SSR1|6745|signal sequence receptor, alpha##AK075562|SSR1|6745|signal sequence receptor, alpha##AK222762|SSR1|6745|signal sequence receptor, alpha##AK222809|SSR1|6745|signal sequence receptor, alpha##AK291550|SSR1|6745|signal sequence receptor, alpha##AK312653|SSR1|6745|signal sequence receptor, alpha##CR936719|SSR1|6745|signal sequence receptor, alpha##BC007710|SSR1|6745|signal sequence receptor, alpha##NM_003144|SSR1|6745|signal sequence receptor, alpha##AF414185|CAGE1|285782|cancer antigen 1##NM_001170692|CAGE1|285782|cancer antigen 1##NM_001170693|CAGE1|285782|cancer antigen 1##NM_205864|CAGE1|285782|cancer antigen 1##AY094356|RIOK1|83732|RIO kinase 1 (yeast)##AK314467|RIOK1|83732|RIO kinase 1 (yeast)##BC006104|RIOK1|83732|RIO kinase 1 (yeast)##NM_031480|RIOK1|83732|RIO kinase 1 (yeast)##AK054568|RIOK1|83732|RIO kinase 1 (yeast)	0.0	
chr7	98400542	98400624	reg1040452.p2	3.950	+	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	-153847	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-370150	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-370289	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	66947	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	67044	-	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	67093	-	NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130	0.0	
chr9	132372182	132372342	reg1002968.p1	3.950	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	-120821	+	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	-120908	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-288967	+	BC112353 AK093122 AX747938 NM_199350	10775	-	TSC_hg19_v1_chr9_+_132388441 NM_014064 AK290957 AK292332 AK298840 AK307056 AK313829	16163	+	TSC_hg19_v1_chr9_+_132388461 BC001396 BC033234 AF110776	16208	+	BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50##NM_014064|METTL11A|28989|methyltransferase like 11A##AK290957|METTL11A|28989|methyltransferase like 11A##AK292332|METTL11A|28989|methyltransferase like 11A##AK298840|METTL11A|28989|methyltransferase like 11A##AK307056|METTL11A|28989|methyltransferase like 11A##AK313829|METTL11A|28989|methyltransferase like 11A##BC001396|METTL11A|28989|methyltransferase like 11A##BC033234|METTL11A|28989|methyltransferase like 11A##AF110776|METTL11A|28989|methyltransferase like 11A	0.0	
chr10	101458385	101458473	reg1031547.p1	3.949	+	TSC_hg19_v1_chr10_+_101419285 AK314542 AK055540 AK309735 NM_020354 BC119008 BC122857 AF269255	-39195	+	TSC_hg19_v1_chr10_-_101380229 NM_031212	-78206	-	BC076399 TSC_hg19_v1_chr10_-_101380197 BC047312	-78249	-	BT007129 DQ890710 DQ893892 BC002382 BC013403 TSC_hg19_v1_chr10_-_101491845 BC078161 AK291654 AK298864	33400	-	AF026850 AF044323 TSC_hg19_v1_chr10_-_101491885	33447	-	TSC_hg19_v1_chr10_+_101491984 NM_015960	33538	+	AK314542|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##AK055540|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##AK309735|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##NM_020354|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##BC119008|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##BC122857|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##AF269255|ENTPD7|57089|ectonucleoside triphosphate diphosphohydrolase 7##NM_031212|SLC25A28|81894|solute carrier family 25, member 28##BC076399|SLC25A28|81894|solute carrier family 25, member 28##BC047312|SLC25A28|81894|solute carrier family 25, member 28##BT007129|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##DQ890710|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##DQ893892|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##BC002382|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##BC013403|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##BC078161|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AK291654|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AK298864|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AF026850|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##AF044323|COX15|1355|COX15 homolog, cytochrome c oxidase assembly protein (yeast)##NM_015960|CUTC|51076|cutC copper transporter homolog (E. coli)	0.74758	CTCF.p2:16:0.748
chr12	118473605	118473680	reg1042436.p2	3.949	+	NM_001130112 NM_001206801 NM_007370 NM_181578 TSC_hg19_v1_chr12_+_118454507 AK291107 AK094575 AK290685 BC001866 BC013961 AB208992 BC020440 L07540 AB464140 CU674898 CR407651	-19074	+	NM_173598	-67615	-	AK294435 AF446135 EU753241 U17327 AK307481 NM_000620 NM_001204218	-674134	-	AK310892 TSC_hg19_v1_chr12_-_118498977 BC015887 AK298513 AF229181 NM_018639	25293	-	TSC_hg19_v1_chr12_-_118499892 AK295555	26293	-	TSC_hg19_v1_chr12_-_118541813 BC001437 BC028698 BC034471 NM_019086 AK000681	68108	-	NM_001130112|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_001206801|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_007370|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_181578|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK291107|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK094575|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AK290685|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC001866|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC013961|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##AB208992|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##BC020440|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##L07540|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##CR407651|RFC5|5985|replication factor C (activator 1) 5, 36.5kDa##NM_173598|KSR2|283455|kinase suppressor of ras 2##AK294435|NOS1|4842|nitric oxide synthase 1 (neuronal)##AF446135|NOS1|4842|nitric oxide synthase 1 (neuronal)##EU753241|NOS1|4842|nitric oxide synthase 1 (neuronal)##U17327|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK307481|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_000620|NOS1|4842|nitric oxide synthase 1 (neuronal)##NM_001204218|NOS1|4842|nitric oxide synthase 1 (neuronal)##AK310892|WSB2|55884|WD repeat and SOCS box containing 2##BC015887|WSB2|55884|WD repeat and SOCS box containing 2##AK298513|WSB2|55884|WD repeat and SOCS box containing 2##AF229181|WSB2|55884|WD repeat and SOCS box containing 2##NM_018639|WSB2|55884|WD repeat and SOCS box containing 2##AK295555|WSB2|55884|WD repeat and SOCS box containing 2##BC001437|VSIG10|54621|V-set and immunoglobulin domain containing 10##BC028698|VSIG10|54621|V-set and immunoglobulin domain containing 10##BC034471|VSIG10|54621|V-set and immunoglobulin domain containing 10##NM_019086|VSIG10|54621|V-set and immunoglobulin domain containing 10##AK000681|VSIG10|54621|V-set and immunoglobulin domain containing 10	0.0	
chr12	3317148	3317237	reg1033222.p1	3.949	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-130630	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-248131	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-248598	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	283249	+	AK125333 TSC_hg19_v1_chr12_-_3601984	284793	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	545076	-	NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B	0.131769	
chr17	56385799	56385902	reg1039659.p1	3.949	+	J02694 X04876 M19507 NM_000250 TSC_hg19_v1_chr17_-_56358297	-27551	-	TSC_hg19_v1_chr17_-_56358164 BC130476	-27685	-	HQ258645 S56200 TSC_hg19_v1_chr17_-_56358145	-27718	-	AB014512 BC150279 NM_004758 NM_024418	20285	-	TSC_hg19_v1_chr17_+_56406294 AK311311 AK311208	20484	+	AX721088 TSC_hg19_v1_chr17_-_56409882	24027	-	J02694|MPO|4353|myeloperoxidase##X04876|MPO|4353|myeloperoxidase##M19507|MPO|4353|myeloperoxidase##NM_000250|MPO|4353|myeloperoxidase##BC130476|MPO|4353|myeloperoxidase##HQ258645|MPO|4353|myeloperoxidase##S56200|MPO|4353|myeloperoxidase##AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##AK311311|LOC100506779|100506779|uncharacterized LOC100506779##AK311208|LOC100506779|100506779|uncharacterized LOC100506779	0.999741	CTCF.p2:5:1.000
chr18	51884289	51884444	reg1024276.p2	3.949	+	AB528241 AF480305 NM_139171	-3424	-	NM_007195 TSC_hg19_v1_chr18_+_51795943 AK301578 AF140501 BC032617 BC032662 AL136670 AF245438 AK093688 AB463184 AM392978 DQ890893 DQ896811 CU689468	-88426	+	TSC_hg19_v1_chr18_-_51751035 AF072242 NM_003927 NM_015832	-133289	-	BX640877 NM_173529	804	+	AK096425 NM_173629	374023	+	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	611372	+	AF480305|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_139171|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_007195|POLI|11201|polymerase (DNA directed) iota##AK301578|POLI|11201|polymerase (DNA directed) iota##AF140501|POLI|11201|polymerase (DNA directed) iota##BC032617|POLI|11201|polymerase (DNA directed) iota##BC032662|POLI|11201|polymerase (DNA directed) iota##AL136670|POLI|11201|polymerase (DNA directed) iota##AF245438|POLI|11201|polymerase (DNA directed) iota##AK093688|POLI|11201|polymerase (DNA directed) iota##AM392978|POLI|11201|polymerase (DNA directed) iota##DQ890893|POLI|11201|polymerase (DNA directed) iota##DQ896811|POLI|11201|polymerase (DNA directed) iota##AF072242|MBD2|8932|methyl-CpG binding domain protein 2##NM_003927|MBD2|8932|methyl-CpG binding domain protein 2##NM_015832|MBD2|8932|methyl-CpG binding domain protein 2##BX640877|C18orf54|162681|chromosome 18 open reading frame 54##NM_173529|C18orf54|162681|chromosome 18 open reading frame 54##AK096425|C18orf26|284254|chromosome 18 open reading frame 26##NM_173629|C18orf26|284254|chromosome 18 open reading frame 26##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family	0.0	
chr7	29675454	29675546	reg1036662.p1	3.949	+	TSC_hg19_v1_chr7_+_29603500 BC018144	-71969	+	TSC_hg19_v1_chr7_+_29603450 BC029131 NM_175887	-72081	+	NM_001039936	-156015	+	TSC_hg19_v1_chr7_+_29846126 NM_001080529	170640	+	TSC_hg19_v1_chr7_-_30029417 AB071705 AK295713 D83777 AK293462 BC040492 NM_001145515 NM_014766 NM_001145513	354008	-	AK295172 NM_001145514	354404	-	BC018144|PRR15|222171|proline rich 15##BC029131|PRR15|222171|proline rich 15##NM_175887|PRR15|222171|proline rich 15##NM_001039936|CHN2|1124|chimerin (chimaerin) 2##NM_001080529|WIPF3|644150|WAS/WASL interacting protein family, member 3##AB071705|SCRN1|9805|secernin 1##AK295713|SCRN1|9805|secernin 1##D83777|SCRN1|9805|secernin 1##AK293462|SCRN1|9805|secernin 1##BC040492|SCRN1|9805|secernin 1##NM_001145515|SCRN1|9805|secernin 1##NM_014766|SCRN1|9805|secernin 1##NM_001145513|SCRN1|9805|secernin 1##AK295172|SCRN1|9805|secernin 1##NM_001145514|SCRN1|9805|secernin 1	0.828567	CTCF.p2:-6:0.829
chr7	99765023	99765152	reg1027829.p1	3.949	+	TSC_hg19_v1_chr7_-_99756347 AK054872	-8739	-	TSC_hg19_v1_chr7_-_99756309 BC015722 NM_018275 BC094727 AK310170	-8788	-	TSC_hg19_v1_chr7_+_99746538 NM_001008395 BC105609 BC063401 BC130553 BC130559	-18532	+	BC012976 TSC_hg19_v1_chr7_-_99766194 AF316113	1116	-	TSC_hg19_v1_chr7_-_99766239 NM_024637	1218	-	AB587513 AM392909 CU693354 DQ893325 DQ896641 AL834418 TSC_hg19_v1_chr7_-_99774981 AB209144 AK096281 BC027972 NM_152742 AY093588	9840	-	AK054872|C7orf43|55262|chromosome 7 open reading frame 43##BC015722|C7orf43|55262|chromosome 7 open reading frame 43##NM_018275|C7orf43|55262|chromosome 7 open reading frame 43##BC094727|C7orf43|55262|chromosome 7 open reading frame 43##AK310170|C7orf43|55262|chromosome 7 open reading frame 43##NM_001008395|C7orf59|389541|chromosome 7 open reading frame 59##BC105609|C7orf59|389541|chromosome 7 open reading frame 59##BC063401|C7orf59|389541|chromosome 7 open reading frame 59##BC130553|C7orf59|389541|chromosome 7 open reading frame 59##BC130559|C7orf59|389541|chromosome 7 open reading frame 59##BC012976|GAL3ST4|79690|galactose-3-O-sulfotransferase 4##AF316113|GAL3ST4|79690|galactose-3-O-sulfotransferase 4##NM_024637|GAL3ST4|79690|galactose-3-O-sulfotransferase 4##AM392909|GPC2|221914|glypican 2##DQ893325|GPC2|221914|glypican 2##DQ896641|GPC2|221914|glypican 2##AL834418|GPC2|221914|glypican 2##AK096281|GPC2|221914|glypican 2##BC027972|GPC2|221914|glypican 2##NM_152742|GPC2|221914|glypican 2##AY093588|GPC2|221914|glypican 2	0.0	
chr8	105601434	105601583	reg1031993.p1	3.949	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-261	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-333	-	CU689878 BC034395 D78011 NM_001385 TSC_hg19_v1_chr8_-_105479284	-122293	-	AF119334 BC109222 BC109223 NM_012082	729638	+	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	1680915	+	AK296561 NM_001198532	1858643	+	AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##BC034395|DPYS|1807|dihydropyrimidinase##D78011|DPYS|1807|dihydropyrimidinase##NM_001385|DPYS|1807|dihydropyrimidinase##AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1	0.0	
chrX	139133228	139133315	reg1040068.p1	3.949	+	BC137148 BC137149 NM_001013403	-85595	-	BC132728 BC132730 AJ580093 AJ580094 NM_001010986 NM_173694	-218856	-	AK302957 AK316416 NM_001099855 NM_001171876	-342917	-	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	453981	-	TSC_hg19_v1_chrX_+_139791923 AK054978	658656	+	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	733381	-	BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##BC132728|ATP11C|286410|ATPase, class VI, type 11C##BC132730|ATP11C|286410|ATPase, class VI, type 11C##AJ580093|ATP11C|286410|ATPase, class VI, type 11C##AJ580094|ATP11C|286410|ATPase, class VI, type 11C##NM_001010986|ATP11C|286410|ATPase, class VI, type 11C##NM_173694|ATP11C|286410|ATPase, class VI, type 11C##AK302957|MCF2|4168|MCF.2 cell line derived transforming sequence##AK316416|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001099855|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171876|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa	0.992664	CTCF.p2:-13:0.993
chrX	148202206	148202387	reg1028062.p2	3.949	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-401684	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-620108	+	BC034320 NM_152578 AY211917 AK098602	-1139441	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	384478	-	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	420134	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	420298	+	AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A	0.0	
chr10	124134911	124135041	reg1039692.p1	3.948	+	AK314660 TSC_hg19_v1_chr10_+_124134274 BC001136	-731	+	NM_001001974 TSC_hg19_v1_chr10_+_124134144	-857	+	AK058088 NM_144587 BC109261 BC109262	-104147	+	AK057463 NM_001195608	10608	+	NM_021622 AF286160	16854	+	BC066349 NM_001099667 BC090924	79203	+	AK314660|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##BC001136|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##NM_001001974|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##AK058088|BTBD16|118663|BTB (POZ) domain containing 16##NM_144587|BTBD16|118663|BTB (POZ) domain containing 16##BC109261|BTBD16|118663|BTB (POZ) domain containing 16##BC109262|BTBD16|118663|BTB (POZ) domain containing 16##AK057463|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##NM_001195608|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##NM_021622|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##AF286160|PLEKHA1|59338|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1##BC066349|ARMS2|387715|age-related maculopathy susceptibility 2##NM_001099667|ARMS2|387715|age-related maculopathy susceptibility 2##BC090924|ARMS2|387715|age-related maculopathy susceptibility 2	0.0	
chr10	3930169	3930304	reg1028498.p1	3.948	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-102727	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-102925	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-715231	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	938182	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1075278	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1075387	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr11	66814269	66814445	reg1036504.p2	3.948	+	NM_177963 AK289672 AK289727 BC037406	-23505	+	AK315810 NM_001177880	-24168	+	AK026328 NM_001136485	-71607	+	TSC_hg19_v1_chr11_+_66824285 NM_014578	9929	+	TSC_hg19_v1_chr11_+_66824317 BC001338 AF498973 CU674656 DQ891124 DQ894303	9983	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	72382	+	NM_177963|SYT12|91683|synaptotagmin XII##AK289672|SYT12|91683|synaptotagmin XII##AK289727|SYT12|91683|synaptotagmin XII##BC037406|SYT12|91683|synaptotagmin XII##AK315810|SYT12|91683|synaptotagmin XII##NM_001177880|SYT12|91683|synaptotagmin XII##AK026328|C11orf86|254439|chromosome 11 open reading frame 86##NM_001136485|C11orf86|254439|chromosome 11 open reading frame 86##NM_014578|RHOD|29984|ras homolog gene family, member D##BC001338|RHOD|29984|ras homolog gene family, member D##AF498973|RHOD|29984|ras homolog gene family, member D##DQ891124|RHOD|29984|ras homolog gene family, member D##DQ894303|RHOD|29984|ras homolog gene family, member D##BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A	0.0	
chr11	66867907	66867997	reg1031679.p2	3.948	+	TSC_hg19_v1_chr11_+_66824317 BC001338 AF498973 CU674656 DQ891124 DQ894303	-43612	+	TSC_hg19_v1_chr11_+_66824285 NM_014578	-43666	+	NM_177963 AK289672 AK289727 BC037406	-77100	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	18787	+	AK096194 TSC_hg19_v1_chr11_+_67007484	139532	+	TSC_hg19_v1_chr11_+_67007558 AB490246 AK299725	139631	+	BC001338|RHOD|29984|ras homolog gene family, member D##AF498973|RHOD|29984|ras homolog gene family, member D##DQ891124|RHOD|29984|ras homolog gene family, member D##DQ894303|RHOD|29984|ras homolog gene family, member D##NM_014578|RHOD|29984|ras homolog gene family, member D##NM_177963|SYT12|91683|synaptotagmin XII##AK289672|SYT12|91683|synaptotagmin XII##AK289727|SYT12|91683|synaptotagmin XII##BC037406|SYT12|91683|synaptotagmin XII##BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A##AK096194|LOC100131150|100131150|uncharacterized LOC100131150##AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A##AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A	0.0	
chr12	102253396	102253515	reg1030768.p1	3.948	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	-28869	-	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	-120236	-	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	-161833	+	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	17663	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	18003	+	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	202295	-	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1##CR457171|CCDC53|51019|coiled-coil domain containing 53	0.0	
chr12	48278891	48278980	reg1028418.p1	3.948	+	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	-65271	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-111901	+	AK092448 NM_001098531	-126061	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	19866	-	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	78403	+	TSC_hg19_v1_chr12_+_48357387 AK310035 AK313698 AK299154 BC107792	78485	+	AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C##AK310035|TMEM106C|79022|transmembrane protein 106C##AK313698|TMEM106C|79022|transmembrane protein 106C##AK299154|TMEM106C|79022|transmembrane protein 106C##BC107792|TMEM106C|79022|transmembrane protein 106C	0.0	
chr1	3541094	3541216	reg1035318.p1	3.948	+	AB231860 NM_001409	-13097	-	TSC_hg19_v1_chr1_-_3447976 AB011539	-93163	-	AK310408 TSC_hg19_v1_chr1_+_3388187 AK296150	-152971	+	TSC_hg19_v1_chr1_+_3541565 NM_182752 AK096427	409	+	AK298343 TSC_hg19_v1_chr1_+_3541608 AK289919 BC019034	454	+	CU678066 AB034912 AK000437 AK225525 BC002611 BC086311 TSC_hg19_v1_chr1_-_3566668 AK302397 NM_017818	25461	-	AB231860|MEGF6|1953|multiple EGF-like-domains 6##NM_001409|MEGF6|1953|multiple EGF-like-domains 6##AB011539|MEGF6|1953|multiple EGF-like-domains 6##AK310408|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##AK296150|ARHGEF16|27237|Rho guanine nucleotide exchange factor (GEF) 16##NM_182752|TPRG1L|127262|tumor protein p63 regulated 1-like##AK096427|TPRG1L|127262|tumor protein p63 regulated 1-like##AK298343|TPRG1L|127262|tumor protein p63 regulated 1-like##AK289919|TPRG1L|127262|tumor protein p63 regulated 1-like##BC019034|TPRG1L|127262|tumor protein p63 regulated 1-like##AB034912|WRAP73|49856|WD repeat containing, antisense to TP73##AK000437|WRAP73|49856|WD repeat containing, antisense to TP73##AK225525|WRAP73|49856|WD repeat containing, antisense to TP73##BC002611|WRAP73|49856|WD repeat containing, antisense to TP73##BC086311|WRAP73|49856|WD repeat containing, antisense to TP73##AK302397|WRAP73|49856|WD repeat containing, antisense to TP73##NM_017818|WRAP73|49856|WD repeat containing, antisense to TP73	0.0	
chr17	36507432	36507588	reg1026558.p2	3.948	+	AY584611 NM_001004334	-7818	-	TSC_hg19_v1_chr17_+_36453138 AK172741 AK225031 HQ258365 BC006235	-54373	+	NM_032351 AK293605 BC130382 BC130384 TSC_hg19_v1_chr17_+_36453120	-54456	+	TSC_hg19_v1_chr17_+_36507726 BC121030 BC121031 BC128607 NM_014598	353	+	TSC_hg19_v1_chr17_+_36584709 NM_001199417	77195	+	TSC_hg19_v1_chr17_-_36729122 AK295027	221612	-	AY584611|GPR179|440435|G protein-coupled receptor 179##NM_001004334|GPR179|440435|G protein-coupled receptor 179##AK172741|MRPL45|84311|mitochondrial ribosomal protein L45##AK225031|MRPL45|84311|mitochondrial ribosomal protein L45##HQ258365|MRPL45|84311|mitochondrial ribosomal protein L45##BC006235|MRPL45|84311|mitochondrial ribosomal protein L45##NM_032351|MRPL45|84311|mitochondrial ribosomal protein L45##AK293605|MRPL45|84311|mitochondrial ribosomal protein L45##BC130382|MRPL45|84311|mitochondrial ribosomal protein L45##BC130384|MRPL45|84311|mitochondrial ribosomal protein L45##BC121030|SOCS7|30837|suppressor of cytokine signaling 7##BC121031|SOCS7|30837|suppressor of cytokine signaling 7##BC128607|SOCS7|30837|suppressor of cytokine signaling 7##NM_014598|SOCS7|30837|suppressor of cytokine signaling 7##NM_001199417|ARHGAP23|57636|Rho GTPase activating protein 23##AK295027|SRCIN1|80725|SRC kinase signaling inhibitor 1	0.0	
chr18	10953832	10954012	reg1032127.p2	3.948	+	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-427825	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-427866	+	TSC_hg19_v1_chr18_+_10526033 AK294038 U78107 AK314495	-427894	+	NM_022068	194838	-	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	735290	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	797593	+	CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK294038|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##U78107|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK314495|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.0	
chr2	62541244	62541387	reg1029756.p2	3.948	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-118049	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-408486	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-425529	-	BC047439 AK091902 AX747245 NM_198276	192224	-	AK292545 NM_001142615	359670	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	391651	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr4	104915368	104915477	reg1035642.p1	3.948	+	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-274522	-	AB527246 AB209996 TSC_hg19_v1_chr4_-_104119535 AK290362 NM_001813 Z15005	-795902	-	AK128463 TSC_hg19_v1_chr4_-_104020987 AF164790 AK023323 AK290160 AK291335 AK300626 BC037277 BC095414 AY358841 BC001953 NM_020139	-894422	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	497060	-	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	500631	-	BX640738 NM_017628	1151609	+	BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##AB209996|CENPE|1062|centromere protein E, 312kDa##AK290362|CENPE|1062|centromere protein E, 312kDa##NM_001813|CENPE|1062|centromere protein E, 312kDa##Z15005|CENPE|1062|centromere protein E, 312kDa##AK128463|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF164790|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK023323|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK290160|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK291335|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AK300626|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC037277|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC095414|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AY358841|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##BC001953|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##NM_020139|BDH2|56898|3-hydroxybutyrate dehydrogenase, type 2##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##AK127778|CXXC4|80319|CXXC finger protein 4##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2	0.989228	CTCF.p2:2:0.989
chr4	14784642	14784823	reg1025133.p1	3.948	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-1155415	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-1235318	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-1238657	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	218977	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	219263	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	219565	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.0	
chr5	5633679	5633767	reg1032017.p1	3.948	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	-210814	+	TSC_hg19_v1_chr5_+_5422777 AK126937	-210948	+	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	-493212	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	744927	-	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	815130	+	TSC_hg19_v1_chr5_+_6449114 AK057805	815466	+	AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1	0.980466	CTCF.p2:-22:0.980
chr6	41167997	41168101	reg1038783.p1	3.948	+	NM_018965 TSC_hg19_v1_chr6_-_41130927 AB062787	-37106	-	TSC_hg19_v1_chr6_-_41130901 AK312215 AF213457	-37161	-	DQ891310 DQ894494 BC032362 BC018284 TSC_hg19_v1_chr6_-_41130855	-37211	-	AF534824 AK023755 BC125078 BC125079 AY358171 NM_024807	874	-	AY358271 NM_198153 BC101780 BC105101 BC143652	28019	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	86375	-	NM_018965|TREM2|54209|triggering receptor expressed on myeloid cells 2##AB062787|TREM2|54209|triggering receptor expressed on myeloid cells 2##AK312215|TREM2|54209|triggering receptor expressed on myeloid cells 2##AF213457|TREM2|54209|triggering receptor expressed on myeloid cells 2##DQ891310|TREM2|54209|triggering receptor expressed on myeloid cells 2##DQ894494|TREM2|54209|triggering receptor expressed on myeloid cells 2##BC032362|TREM2|54209|triggering receptor expressed on myeloid cells 2##BC018284|TREM2|54209|triggering receptor expressed on myeloid cells 2##AF534824|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AK023755|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125078|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##BC125079|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AY358171|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##NM_024807|TREML2|79865|triggering receptor expressed on myeloid cells-like 2##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1	0.0	
chr7	148982079	148982225	reg1029729.p2	3.948	+	TSC_hg19_v1_chr7_+_148959286 AK131504 NM_001195220 BC131569 AB528912	-22832	+	TSC_hg19_v1_chr7_+_148936741 AK074821 NM_012256 BC022785 EU446738 CU692712	-45358	+	D30612 TSC_hg19_v1_chr7_+_148892683 NM_003575 AK299280 BC073805 AK316282 AB587508 BC055287 BC041704	-89463	+	AK098351 AK310453 AK310396 TSC_hg19_v1_chr7_+_148982401 AK303492	234	+	TSC_hg19_v1_chr7_-_149157908 AB033111 NM_015694	175807	-	TSC_hg19_v1_chr7_-_149194795 BC068505 BC035586	212633	-	NM_001195220|ZNF783|100289678|zinc finger family member 783##AK074821|ZNF212|7988|zinc finger protein 212##NM_012256|ZNF212|7988|zinc finger protein 212##BC022785|ZNF212|7988|zinc finger protein 212##EU446738|ZNF212|7988|zinc finger protein 212##D30612|ZNF282|8427|zinc finger protein 282##NM_003575|ZNF282|8427|zinc finger protein 282##AK299280|ZNF282|8427|zinc finger protein 282##BC073805|ZNF282|8427|zinc finger protein 282##AK316282|ZNF282|8427|zinc finger protein 282##BC055287|ZNF282|8427|zinc finger protein 282##BC041704|ZNF282|8427|zinc finger protein 282##AK098351|LOC155060|155060|AI894139 pseudogene##AK310453|LOC155060|155060|AI894139 pseudogene##AK310396|LOC155060|155060|AI894139 pseudogene##AK303492|LOC155060|155060|AI894139 pseudogene##AB033111|ZNF777|27153|zinc finger protein 777##NM_015694|ZNF777|27153|zinc finger protein 777##BC068505|ZNF746|155061|zinc finger protein 746##BC035586|ZNF746|155061|zinc finger protein 746	0.166168	
chr7	52327878	52328004	reg1036645.p1	3.948	+	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	-943455	-	AB385366 TSC_hg19_v1_chr7_-_51384416 BC136441 BC144099	-943561	-	TSC_hg19_v1_chr7_-_50861150 NM_001001555	-1466787	-	NM_182595	775407	+	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	2282141	+	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	2498938	-	BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##BC136441|COBL|23242|cordon-bleu homolog (mouse)##BC144099|COBL|23242|cordon-bleu homolog (mouse)##NM_001001555|GRB10|2887|growth factor receptor-bound protein 10##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12##NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit	0.0	
chr8	22831829	22832009	reg1024029.p1	3.948	+	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	-46595	-	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-281135	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-281414	-	AK092617 BC034917 NM_001160036	13004	+	NM_001160037	21441	+	TSC_hg19_v1_chr8_+_22857067 AB018260 NM_015178	25158	+	AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2##AB018260|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_015178|RHOBTB2|23221|Rho-related BTB domain containing 2	0.0	
chrX	130926996	130927108	reg1007810.p3	3.948	+	BC137050 AB529233 NM_001004486	-249054	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-503640	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-503790	-	TSC_hg19_v1_chrX_-_130964633 AK097911	37599	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	230269	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	230588	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.026446	
chr10	82939903	82939982	reg1004169.p2	3.947	+	AK123978 NM_001145719	-639368	+	AK123885 NM_207372	-642285	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-725838	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	695140	+	DQ857894 NM_001165973	697500	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	2959315	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.0	
chr11	77065897	77066040	reg1032402.p1	3.947	+	AY313782 AY326450 NM_182833	-67506	-	TSC_hg19_v1_chr11_+_76883833 BC023212	-182120	+	NM_000260 NM_001127179 U39226 NM_001127180 U34227 U55208 U55209 BC144519	-226640	+	TSC_hg19_v1_chr11_-_77122998 AK296006 AK055228	57031	-	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	118864	-	BC040443 NM_173039 TSC_hg19_v1_chr11_+_77300718 AB028147	234732	+	AY313782|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##AY326450|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##NM_182833|GDPD4|220032|glycerophosphodiester phosphodiesterase domain containing 4##BC023212|MYO7A|4647|myosin VIIA##NM_000260|MYO7A|4647|myosin VIIA##NM_001127179|MYO7A|4647|myosin VIIA##U39226|MYO7A|4647|myosin VIIA##NM_001127180|MYO7A|4647|myosin VIIA##U34227|MYO7A|4647|myosin VIIA##U55208|MYO7A|4647|myosin VIIA##U55209|MYO7A|4647|myosin VIIA##BC144519|MYO7A|4647|myosin VIIA##AK296006|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK055228|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC040443|AQP11|282679|aquaporin 11##NM_173039|AQP11|282679|aquaporin 11##AB028147|AQP11|282679|aquaporin 11	0.0	
chr18	48577478	48577610	reg1010275.p1	3.947	+	TSC_hg19_v1_chr18_+_48556613 AK290770 BC002379	-20938	+	TSC_hg19_v1_chr18_+_48556582 NM_005359	-21010	+	TSC_hg19_v1_chr18_+_48494409 AK024822 AF308695 AK303027 AK310911 BC014624 AK223507 AB029151	-83123	+	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	145682	-	AY950679 TSC_hg19_v1_chr18_-_48723734	146168	-	TSC_hg19_v1_chr18_-_48724033 NM_016626	146496	-	AK290770|SMAD4|4089|SMAD family member 4##BC002379|SMAD4|4089|SMAD family member 4##NM_005359|SMAD4|4089|SMAD family member 4##AK024822|ELAC1|55520|elaC homolog 1 (E. coli)##AF308695|ELAC1|55520|elaC homolog 1 (E. coli)##AK310911|ELAC1|55520|elaC homolog 1 (E. coli)##BC014624|ELAC1|55520|elaC homolog 1 (E. coli)##AK223507|ELAC1|55520|elaC homolog 1 (E. coli)##AB029151|ELAC1|55520|elaC homolog 1 (E. coli)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)	0.0	
chr19	48412752	48412846	reg1037228.p1	3.947	+	BC020755 TSC_hg19_v1_chr19_-_48389573 L02337 S43859 AK313415 AK289380 NM_003167	-23187	-	CU676700 DQ891165 DQ894346 U08024 L20000 X70222 TSC_hg19_v1_chr19_-_48389554 X84816 U08025	-23261	-	NM_000554 DQ426868 BC016664 DQ426867 BC053672	-87644	+	AB590993 DQ227497 NM_001128326	82583	-	AF279147 NM_022142 BC015598	85126	+	HQ258076 BC126133 BC126135 AF169159 NM_019855	134446	-	BC020755|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L02337|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##S43859|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##AK313415|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##AK289380|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##NM_003167|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ891165|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##DQ894346|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08024|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##L20000|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X70222|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##X84816|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##U08025|SULT2A1|6822|sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1##NM_000554|CRX|1406|cone-rod homeobox##DQ426868|CRX|1406|cone-rod homeobox##BC016664|CRX|1406|cone-rod homeobox##DQ426867|CRX|1406|cone-rod homeobox##BC053672|CRX|1406|cone-rod homeobox##DQ227497|BSPH1|100131137|binder of sperm protein homolog 1##NM_001128326|BSPH1|100131137|binder of sperm protein homolog 1##AF279147|ELSPBP1|64100|epididymal sperm binding protein 1##NM_022142|ELSPBP1|64100|epididymal sperm binding protein 1##BC015598|ELSPBP1|64100|epididymal sperm binding protein 1##HQ258076|CABP5|56344|calcium binding protein 5##BC126133|CABP5|56344|calcium binding protein 5##BC126135|CABP5|56344|calcium binding protein 5##AF169159|CABP5|56344|calcium binding protein 5##NM_019855|CABP5|56344|calcium binding protein 5	0.820322	CTCF.p2:9:0.820
chr20	62762889	62762980	reg1031915.p2	3.947	+	BC067481 BC067482 BC067483 CU688304 CU688306 NM_005286	-24751	-	BC038433 NM_001200019	-46566	+	BC036837 NM_001007125	-47223	-	TSC_hg19_v1_chr20_+_62795804 BC018917	32856	+	AB020642 NM_004535 TSC_hg19_v1_chr20_+_62795840	32899	+	TSC_hg19_v1_chr20_+_62887100 NM_001104925 NM_018257 BC040945 BC032332 AK001745 BC045775	124227	+	BC067481|NPBWR2|2832|neuropeptides B/W receptor 2##BC067482|NPBWR2|2832|neuropeptides B/W receptor 2##BC067483|NPBWR2|2832|neuropeptides B/W receptor 2##NM_005286|NPBWR2|2832|neuropeptides B/W receptor 2##BC038433|OPRL1|4987|opiate receptor-like 1##NM_001200019|OPRL1|4987|opiate receptor-like 1##BC036837|C20orf201|198437|chromosome 20 open reading frame 201##NM_001007125|C20orf201|198437|chromosome 20 open reading frame 201##BC018917|MYT1|4661|myelin transcription factor 1##AB020642|MYT1|4661|myelin transcription factor 1##NM_004535|MYT1|4661|myelin transcription factor 1##NM_001104925|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##NM_018257|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC040945|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC032332|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##AK001745|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC045775|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	0.947273	CTCF.p2:7:0.947
chr2	3643616	3643787	reg1037932.p2	3.947	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-1132	+	X74803 TSC_hg19_v1_chr2_+_3627765	-15956	+	TSC_hg19_v1_chr2_+_3623128 BC071919 AB464168 DQ892985 DQ896234 M77233 AF085824	-20536	+	AK302299 NM_018436 BC029652	62096	+	U23752 AB028641 NM_003108 BC025789 AB464713	2189114	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	3362199	-	AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##X74803|RPS7|6201|ribosomal protein S7##BC071919|RPS7|6201|ribosomal protein S7##DQ892985|RPS7|6201|ribosomal protein S7##DQ896234|RPS7|6201|ribosomal protein S7##M77233|RPS7|6201|ribosomal protein S7##AF085824|RPS7|6201|ribosomal protein S7##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	0.0	
chr3	10265380	10265499	reg1025547.p1	3.947	+	NM_001570 BC125184 AK299033 AK312841 TSC_hg19_v1_chr3_+_10206602 AF026273 AB587544 AJ496794	-58839	+	TSC_hg19_v1_chr3_+_10183517 AB528056	-81901	+	AK304002 TSC_hg19_v1_chr3_+_10183487	-81941	+	TSC_hg19_v1_chr3_+_10290182 NM_014760	24736	+	TSC_hg19_v1_chr3_+_10290210 D86972	24823	+	TSC_hg19_v1_chr3_+_10290370 AK289794 BC090935 BC101776 BC101770	25083	+	NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2##BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK304002|VHL|7428|von Hippel-Lindau tumor suppressor##NM_014760|TATDN2|9797|TatD DNase domain containing 2##D86972|TATDN2|9797|TatD DNase domain containing 2##AK289794|TATDN2|9797|TatD DNase domain containing 2##BC090935|TATDN2|9797|TatD DNase domain containing 2##BC101776|TATDN2|9797|TatD DNase domain containing 2##BC101770|TATDN2|9797|TatD DNase domain containing 2	0.0	
chr3	108800768	108800949	reg1003891.p1	3.947	+	AF110003 EU832759 GQ129299 AF110002 BC103993 BC103994 AB593147 NM_005459	-128247	-	AK291991 AJ240085 AF161547 NM_016388 BC025713 AJ224878	-259264	+	HQ258043 AM050721 BC113502 BC113528 BC069318 AF290873 AF323084 AY358655 NM_032579 TSC_hg19_v1_chr3_-_108476258	-324713	-	CU690636 BC050307 AK302642 AF084946 BC028680 NM_014429	36092	-	AK026416 TSC_hg19_v1_chr3_+_108855566	54705	+	BC018070 AY283672 NM_138815	234443	-	AF110003|GUCA1C|9626|guanylate cyclase activator 1C##EU832759|GUCA1C|9626|guanylate cyclase activator 1C##GQ129299|GUCA1C|9626|guanylate cyclase activator 1C##AF110002|GUCA1C|9626|guanylate cyclase activator 1C##BC103993|GUCA1C|9626|guanylate cyclase activator 1C##BC103994|GUCA1C|9626|guanylate cyclase activator 1C##AB593147|GUCA1C|9626|guanylate cyclase activator 1C##NM_005459|GUCA1C|9626|guanylate cyclase activator 1C##AK291991|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ240085|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AF161547|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##NM_016388|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##BC025713|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##AJ224878|TRAT1|50852|T cell receptor associated transmembrane adaptor 1##HQ258043|RETNLB|84666|resistin like beta##AM050721|RETNLB|84666|resistin like beta##BC113502|RETNLB|84666|resistin like beta##BC113528|RETNLB|84666|resistin like beta##BC069318|RETNLB|84666|resistin like beta##AF290873|RETNLB|84666|resistin like beta##AF323084|RETNLB|84666|resistin like beta##AY358655|RETNLB|84666|resistin like beta##NM_032579|RETNLB|84666|resistin like beta##BC050307|MORC1|27136|MORC family CW-type zinc finger 1##AK302642|MORC1|27136|MORC family CW-type zinc finger 1##AF084946|MORC1|27136|MORC family CW-type zinc finger 1##BC028680|MORC1|27136|MORC family CW-type zinc finger 1##NM_014429|MORC1|27136|MORC family CW-type zinc finger 1##AK026416|FLJ22763|401081|uncharacterized LOC401081##BC018070|DPPA2|151871|developmental pluripotency associated 2##AY283672|DPPA2|151871|developmental pluripotency associated 2##NM_138815|DPPA2|151871|developmental pluripotency associated 2	0.0	
chr3	52273594	52273690	reg1025684.p2	3.947	+	TSC_hg19_v1_chr3_+_52273270 BC039681	-379	+	TSC_hg19_v1_chr3_-_52273175 AL136773 BC016452 BC021003 NM_007284	-480	-	CR456732 CR533520 CU678412 AM392602 DQ891754 DQ894936 AB385234 AF109365 TSC_hg19_v1_chr3_-_52273109 BC003161 BC000327 Y17169	-558	-	TSC_hg19_v1_chr3_+_52279770 NM_144641 AB474372 AK096681	6185	+	AK056894 NM_001122870 BC009644	6562	+	BC018941 AK074290 TSC_hg19_v1_chr3_-_52294468	20805	-	AL136773|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##BC016452|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##NM_007284|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##CR456732|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##CR533520|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##DQ891754|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##DQ894936|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##AF109365|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##BC003161|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##BC000327|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##Y17169|TWF2|11344|twinfilin, actin-binding protein, homolog 2 (Drosophila)##NM_144641|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##AB474372|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##AK096681|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##AK056894|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##NM_001122870|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##BC009644|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##BC018941|WDR82|80335|WD repeat domain 82##AK074290|WDR82|80335|WD repeat domain 82	0.046285	
chr4	38822108	38822288	reg1040247.p1	3.947	+	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	-15779	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	-37599	-	AF289565 TSC_hg19_v1_chr4_-_38666549	-155709	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	36230	-	TSC_hg19_v1_chr4_+_38869390 NM_138389 AK304050 AK296859 AK292831 BC040452	47193	+	BC030803 BC060512 AK026888 NM_024943	211812	-	AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6##NM_138389|FAM114A1|92689|family with sequence similarity 114, member A1##AK304050|FAM114A1|92689|family with sequence similarity 114, member A1##AK296859|FAM114A1|92689|family with sequence similarity 114, member A1##AK292831|FAM114A1|92689|family with sequence similarity 114, member A1##BC040452|FAM114A1|92689|family with sequence similarity 114, member A1##BC030803|TMEM156|80008|transmembrane protein 156##BC060512|TMEM156|80008|transmembrane protein 156##AK026888|TMEM156|80008|transmembrane protein 156##NM_024943|TMEM156|80008|transmembrane protein 156	0.0	
chr8	128218514	128218622	reg1030595.p2	3.947	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-647844	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-648013	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1255155	-	DQ486513 NM_001159542	209288	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	529757	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	529922	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.0	
chr10	62642986	62643094	reg1037826.p1	3.946	+	TSC_hg19_v1_chr10_+_62538253 BC107750 AK291939	-104769	+	NM_001170406 AK295741 NM_001170407 NM_001786 NM_033379 X05360 Y00272 TSC_hg19_v1_chr10_+_62538235	-104877	+	TSC_hg19_v1_chr10_-_62493282 NM_001204403	-149756	-	BC041791 AB018283 BC032848 TSC_hg19_v1_chr10_-_62704033 NM_001242359 NM_014836 AK307630	60912	-	AK075129 BC093035 TSC_hg19_v1_chr10_-_62761269	118200	-	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	569919	-	BC107750|CDK1|983|cyclin-dependent kinase 1##AK291939|CDK1|983|cyclin-dependent kinase 1##NM_001170406|CDK1|983|cyclin-dependent kinase 1##AK295741|CDK1|983|cyclin-dependent kinase 1##NM_001170407|CDK1|983|cyclin-dependent kinase 1##NM_001786|CDK1|983|cyclin-dependent kinase 1##NM_033379|CDK1|983|cyclin-dependent kinase 1##X05360|CDK1|983|cyclin-dependent kinase 1##Y00272|CDK1|983|cyclin-dependent kinase 1##NM_001204403|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BC041791|RHOBTB1|9886|Rho-related BTB domain containing 1##AB018283|RHOBTB1|9886|Rho-related BTB domain containing 1##BC032848|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_001242359|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_014836|RHOBTB1|9886|Rho-related BTB domain containing 1##AK307630|RHOBTB1|9886|Rho-related BTB domain containing 1##AK075129|RHOBTB1|9886|Rho-related BTB domain containing 1##BC093035|RHOBTB1|9886|Rho-related BTB domain containing 1##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26	0.1498	
chr1	23984324	23984438	reg1033440.p1	3.946	+	NM_002167 X69111	-98097	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	-98397	-	L22846 NM_004091	-126670	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	33899	+	TSC_hg19_v1_chr1_+_24018295 BC018970	33918	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	85523	+	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11##BC018970|RPL11|6135|ribosomal protein L11##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)	0.0	
chr19	21541529	21541595	reg1032696.p1	3.946	+	TSC_hg19_v1_chr19_-_21512183 AK128184 AK131527 NM_021269 AK095062 BX647526	-29369	-	BX647597 TSC_hg19_v1_chr19_+_21324836 AK308127 NM_133473 AK293072 AB075849 BC065374 BC040506	-216706	+	NM_182515 AL834415 TSC_hg19_v1_chr19_+_21264973 AK056006 BC022527 BC037782 BC050468 BC064985	-276559	+	BC034499 TSC_hg19_v1_chr19_+_21541801 AK027579 AK291002 AK291193	218	+	TSC_hg19_v1_chr19_+_21579931 NM_001076678 NM_145326 NM_175910 BX648842 AK092178 AK128494 AB209086 BC006408 BC022394 AX721142 EU446562	38399	+	CR627135 TSC_hg19_v1_chr19_-_21646716	105143	-	AK128184|ZNF708|7562|zinc finger protein 708##AK131527|ZNF708|7562|zinc finger protein 708##NM_021269|ZNF708|7562|zinc finger protein 708##BX647526|ZNF708|7562|zinc finger protein 708##BX647597|ZNF431|170959|zinc finger protein 431##AK308127|ZNF431|170959|zinc finger protein 431##NM_133473|ZNF431|170959|zinc finger protein 431##AK293072|ZNF431|170959|zinc finger protein 431##AB075849|ZNF431|170959|zinc finger protein 431##BC040506|ZNF431|170959|zinc finger protein 431##NM_182515|ZNF714|148206|zinc finger protein 714##AK056006|ZNF714|148206|zinc finger protein 714##BC022527|ZNF714|148206|zinc finger protein 714##BC037782|ZNF714|148206|zinc finger protein 714##BC050468|ZNF714|148206|zinc finger protein 714##BC064985|ZNF714|148206|zinc finger protein 714##BC034499|ZNF738|148203|zinc finger protein 738##AK027579|ZNF738|148203|zinc finger protein 738##AK291002|ZNF738|148203|zinc finger protein 738##AK291193|ZNF738|148203|zinc finger protein 738##NM_001076678|ZNF493|284443|zinc finger protein 493##NM_145326|ZNF493|284443|zinc finger protein 493##NM_175910|ZNF493|284443|zinc finger protein 493##BX648842|ZNF493|284443|zinc finger protein 493##AK092178|ZNF493|284443|zinc finger protein 493##AK128494|ZNF493|284443|zinc finger protein 493##AB209086|ZNF493|284443|zinc finger protein 493##BC006408|ZNF493|284443|zinc finger protein 493##BC022394|ZNF493|284443|zinc finger protein 493##EU446562|ZNF493|284443|zinc finger protein 493	0.0	
chr2	102372256	102372337	reg1031470.p2	3.946	+	TSC_hg19_v1_chr2_+_102314168 NM_001242560 NM_004834 NM_145686 BC064691 AK296396 AF096300 NM_001242559 NM_145687 AB384511 AY212247 AY834276	-57944	+	AK131289 AK298610 NM_001145664 TSC_hg19_v1_chr2_-_102091212	-281103	-	TSC_hg19_v1_chr2_-_102003966 BC032949 BC047514 NM_153836 AB046109	-368307	-	TSC_hg19_v1_chr2_+_102508334 BC045694	136046	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	136236	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	236067	+	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK131289|RFX8|731220|regulatory factor X, 8##AK298610|RFX8|731220|regulatory factor X, 8##NM_001145664|RFX8|731220|regulatory factor X, 8##BC032949|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC047514|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_153836|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AB046109|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II	0.0	
chr6	11806840	11807006	reg1037097.p2	3.946	+	NM_001143948 NM_032744	-27644	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-268425	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-424383	-	NM_002114	205800	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	483670	+	TSC_hg19_v1_chr6_+_12514301 D28417	707379	+	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr8	2308406	2308523	reg1032979.p1	3.946	+	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-315262	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-355556	+	TSC_hg19_v1_chr8_+_1950340 BC169332	-358112	+	AK128880 TSC_hg19_v1_chr8_-_2585966	277518	-	AY017307 TSC_hg19_v1_chr8_-_4852228	2543761	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	2543830	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##BC169332|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.9896	CTCF.p2:4:0.990
chr11	35999856	35999946	reg1030144.p2	3.945	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	-34290	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-315228	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-315451	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	311052	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	311085	-	NM_001160167 AK055042	317879	+	BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9##NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like	0.0	
chr1	209830546	209830622	reg1033976.p1	3.945	+	TSC_hg19_v1_chr1_-_209825820 BC058922 NM_000228	-4760	-	L25541 NM_001127641 D37766 TSC_hg19_v1_chr1_-_209825771 AK296851 AK309524	-4860	-	TSC_hg19_v1_chr1_-_209824718 NM_001017402	-5905	-	TSC_hg19_v1_chr1_+_209848757 NM_015714 BC009694	18140	+	TSC_hg19_v1_chr1_+_209848994 BT007101 CR542179 CR542193 DQ894610 EU176279	18427	+	NM_001206741 NM_181755	28940	+	BC058922|LAMB3|3914|laminin, beta 3##NM_000228|LAMB3|3914|laminin, beta 3##L25541|LAMB3|3914|laminin, beta 3##NM_001127641|LAMB3|3914|laminin, beta 3##D37766|LAMB3|3914|laminin, beta 3##AK296851|LAMB3|3914|laminin, beta 3##AK309524|LAMB3|3914|laminin, beta 3##NM_001017402|LAMB3|3914|laminin, beta 3##NM_015714|G0S2|50486|G0/G1switch 2##BC009694|G0S2|50486|G0/G1switch 2##BT007101|G0S2|50486|G0/G1switch 2##CR542179|G0S2|50486|G0/G1switch 2##CR542193|G0S2|50486|G0/G1switch 2##DQ894610|G0S2|50486|G0/G1switch 2##EU176279|G0S2|50486|G0/G1switch 2##NM_001206741|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##NM_181755|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1	0.0	
chr2	192366419	192366524	reg1038696.p1	3.945	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-256373	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-350164	-	TSC_hg19_v1_chr2_-_192015965 NM_003151	-350512	-	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	176391	+	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	345267	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	345500	-	NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##NM_003151|STAT4|6775|signal transducer and activator of transcription 4##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response	0.591896	CTCF.p2:7:0.592
chr2	224814089	224814212	reg1033051.p1	3.945	+	TSC_hg19_v1_chr2_-_224810053 BC065934 NM_020830 AJ310568	-4085	-	TSC_hg19_v1_chr2_-_224810031 BC021065	-4118	-	TSC_hg19_v1_chr2_-_224810020 AK023415 AK022888	-4126	-	TSC_hg19_v1_chr2_+_224822174 NM_022915 AK022763 BC012058 AK024052 CR457293 CU680184	8003	+	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	52478	-	AK295564 NM_001136530	89190	-	BC065934|WDFY1|57590|WD repeat and FYVE domain containing 1##NM_020830|WDFY1|57590|WD repeat and FYVE domain containing 1##AJ310568|WDFY1|57590|WD repeat and FYVE domain containing 1##AK023415|WDFY1|57590|WD repeat and FYVE domain containing 1##AK022888|WDFY1|57590|WD repeat and FYVE domain containing 1##NM_022915|MRPL44|65080|mitochondrial ribosomal protein L44##AK022763|MRPL44|65080|mitochondrial ribosomal protein L44##BC012058|MRPL44|65080|mitochondrial ribosomal protein L44##AK024052|MRPL44|65080|mitochondrial ribosomal protein L44##CR457293|MRPL44|65080|mitochondrial ribosomal protein L44##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	0.63781	CTCF.p2:-50:0.563
chr3	129245095	129245256	reg1038415.p2	3.945	+	TSC_hg19_v1_chr3_+_129159160 AK298526 AK299903 CU678342 EU832629 EU832704	-86013	+	BC028353 TSC_hg19_v1_chr3_+_129159138	-86037	+	TSC_hg19_v1_chr3_+_129159089 AF302154	-86063	+	NM_000539 BX537381 BC112104 BC112106 AB464154 AM392780	2352	+	AY158091 NM_153833	16881	+	TSC_hg19_v1_chr3_-_129325518 NM_015103 AB014520 AY116661 BC150280	80264	-	AK298526|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)##AK299903|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)##EU832629|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)##EU832704|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)##BC028353|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)##AF302154|IFT122|55764|intraflagellar transport 122 homolog (Chlamydomonas)##NM_000539|RHO|6010|rhodopsin##BX537381|RHO|6010|rhodopsin##BC112104|RHO|6010|rhodopsin##BC112106|RHO|6010|rhodopsin##AM392780|RHO|6010|rhodopsin##AY158091|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_153833|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_015103|PLXND1|23129|plexin D1##AB014520|PLXND1|23129|plexin D1##AY116661|PLXND1|23129|plexin D1##BC150280|PLXND1|23129|plexin D1	0.0	
chr4	85499857	85499974	reg1038810.p2	3.945	+	NM_006168	-80529	-	TSC_hg19_v1_chr4_+_84457420 DQ345298 BC090956 AY358100 NM_032717 DQ324782	-1042334	+	TSC_hg19_v1_chr4_+_84457260 AK055749 AK223543	-1042643	+	NM_001263 U65887	4178	+	NM_014991	387628	-	TSC_hg19_v1_chr4_+_86396423 NM_001025616 AK091196 AX746841 BC047918	896428	+	NM_006168|NKX6-1|4825|NK6 homeobox 1##DQ345298|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##BC090956|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AY358100|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_032717|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##DQ324782|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK055749|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##AK223543|AGPAT9|84803|1-acylglycerol-3-phosphate O-acyltransferase 9##NM_001263|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##U65887|CDS1|1040|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1##NM_014991|WDFY3|23001|WD repeat and FYVE domain containing 3##NM_001025616|ARHGAP24|83478|Rho GTPase activating protein 24##AK091196|ARHGAP24|83478|Rho GTPase activating protein 24##BC047918|ARHGAP24|83478|Rho GTPase activating protein 24	0.994857	CTCF.p2:4:0.995
chr6	98373508	98373608	reg1035081.p1	3.945	+	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	-642468	-	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	-1000935	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-1027794	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	909022	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	909114	+	TSC_hg19_v1_chr6_-_99395800 BC091484 BC032641	1022231	-	AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2##BC091484|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC032641|FBXL4|26235|F-box and leucine-rich repeat protein 4	0.0	
chr7	100063588	100063673	reg1035070.p2	3.945	+	BC031966 NM_001004323	-1737	-	TSC_hg19_v1_chr7_-_100034098 BC026269 NM_145030	-29553	-	TSC_hg19_v1_chr7_+_100027484 AK291366 BC000556 BC018935	-36101	+	BC001966 BC031622 AK314824 TSC_hg19_v1_chr7_-_100076802 BC002972 BC010406 AK296580 AK297702 AK310800 BC001486 NM_030935	13197	-	AK124773 NM_173564	17919	+	TSC_hg19_v1_chr7_+_100136826 NM_006076 BC009393	73181	+	BC031966|C7orf61|402573|chromosome 7 open reading frame 61##NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61##BC026269|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##NM_145030|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##AK291366|MEPCE|56257|methylphosphate capping enzyme##BC000556|MEPCE|56257|methylphosphate capping enzyme##BC018935|MEPCE|56257|methylphosphate capping enzyme##BC001966|TSC22D4|81628|TSC22 domain family, member 4##BC031622|TSC22D4|81628|TSC22 domain family, member 4##AK314824|TSC22D4|81628|TSC22 domain family, member 4##BC002972|TSC22D4|81628|TSC22 domain family, member 4##BC010406|TSC22D4|81628|TSC22 domain family, member 4##AK296580|TSC22D4|81628|TSC22 domain family, member 4##AK297702|TSC22D4|81628|TSC22 domain family, member 4##BC001486|TSC22D4|81628|TSC22 domain family, member 4##NM_030935|TSC22D4|81628|TSC22 domain family, member 4##AK124773|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_173564|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_006076|AGFG2|3268|ArfGAP with FG repeats 2##BC009393|AGFG2|3268|ArfGAP with FG repeats 2	0.093153	
chr7	17720399	17720579	reg1016352.p1	3.945	+	TSC_hg19_v1_chr7_+_17382906 BC021696	-337583	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	-382220	+	AY359065 BC058284 NM_176813	-798885	-	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	259560	-	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	259638	-	BC062797 BC005309 M57423 NM_175886	346976	-	BC021696|AHR|196|aryl hydrocarbon receptor##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13##AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1	0.0	
chr8	128748611	128748789	reg1016816.p2	3.945	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-210	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-375	+	DQ486513 NM_001159542	-320844	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	58083	+	AB042405 NM_031415	2050433	-	BC003599 TSC_hg19_v1_chr8_-_130951934	2203215	-	AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr1	150533907	150534067	reg1002581.p3	3.944	+	TSC_hg19_v1_chr1_+_150521883 AF289612 NM_019032 NM_025008	-12133	+	AK292435 TSC_hg19_v1_chr1_+_150480584 AK301369 AK316390 AK302279 U65932 DQ893011 DQ896257	-53353	+	NM_001202858 NM_004425 NM_022664 TSC_hg19_v1_chr1_+_150480582 AK097205 AK097046 BC023505 DQ010946 DQ112074 U68186 U68187	-53453	+	AB385142 AF203373 BT006640 CU677857 DQ890628 DQ893795 FJ917536 TSC_hg19_v1_chr1_-_150552076 AF118124 BC017197 BC071897 L08246 AK300499 BC107735 AK294462	18053	-	TSC_hg19_v1_chr1_-_150552077 AK316267 AK297217 AK304775 AK312508	18094	-	TSC_hg19_v1_chr1_-_150552129 NM_001197320 NM_021960 NM_182763	18183	-	AF289612|ADAMTSL4|54507|ADAMTS-like 4##NM_019032|ADAMTSL4|54507|ADAMTS-like 4##NM_025008|ADAMTSL4|54507|ADAMTS-like 4##AK292435|ECM1|1893|extracellular matrix protein 1##AK301369|ECM1|1893|extracellular matrix protein 1##AK316390|ECM1|1893|extracellular matrix protein 1##AK302279|ECM1|1893|extracellular matrix protein 1##U65932|ECM1|1893|extracellular matrix protein 1##DQ893011|ECM1|1893|extracellular matrix protein 1##DQ896257|ECM1|1893|extracellular matrix protein 1##NM_001202858|ECM1|1893|extracellular matrix protein 1##NM_004425|ECM1|1893|extracellular matrix protein 1##NM_022664|ECM1|1893|extracellular matrix protein 1##AK097205|ECM1|1893|extracellular matrix protein 1##AK097046|ECM1|1893|extracellular matrix protein 1##BC023505|ECM1|1893|extracellular matrix protein 1##U68186|ECM1|1893|extracellular matrix protein 1##U68187|ECM1|1893|extracellular matrix protein 1##AF203373|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BT006640|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##DQ890628|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##DQ893795|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##FJ917536|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AF118124|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC017197|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC071897|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##L08246|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK300499|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##BC107735|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK294462|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK316267|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK297217|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK304775|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##AK312508|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_001197320|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_021960|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)##NM_182763|MCL1|4170|myeloid cell leukemia sequence 1 (BCL2-related)	0.0	
chr12	55052570	55052653	reg1030060.p1	3.944	+	AY590150 AF144011 BC062682 BC069108 NM_053283 EF503687 EF503688 EF503689	-10406	-	CU686745 CU687522 AF238867 BC069317 NM_033277 BC062217	-23960	-	CR457003 AY063766 U48707 TSC_hg19_v1_chr12_-_54982398 BC022470 NM_006741 AK123969	-70247	-	NM_058173 AF414087 AY359062 BC111421 AY651259	195721	+	BC132732 BC132734 NM_001098815	323010	-	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	325891	-	AY590150|DCD|117159|dermcidin##AF144011|DCD|117159|dermcidin##BC062682|DCD|117159|dermcidin##BC069108|DCD|117159|dermcidin##NM_053283|DCD|117159|dermcidin##EF503687|DCD|117159|dermcidin##EF503688|DCD|117159|dermcidin##EF503689|DCD|117159|dermcidin##AF238867|LACRT|90070|lacritin##BC069317|LACRT|90070|lacritin##NM_033277|LACRT|90070|lacritin##BC062217|LACRT|90070|lacritin##CR457003|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AY063766|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##U48707|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##BC022470|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_006741|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##AK123969|PPP1R1A|5502|protein phosphatase 1, regulatory (inhibitor) subunit 1A##NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748	0.999819	CTCF.p2:17:1.000
chr1	3589990	3590170	reg1035855.p1	3.944	+	TSC_hg19_v1_chr1_+_3569108 BC117251 BC117253 NM_001204184 NM_001204185 NM_001204186 NM_001204187 NM_001204188 NM_005427 Y11416	-20954	+	CU678066 AB034912 AK000437 AK225525 BC002611 BC086311 TSC_hg19_v1_chr1_-_3566668 AK302397 NM_017818	-23464	-	AK298343 TSC_hg19_v1_chr1_+_3541608 AK289919 BC019034	-48471	+	TSC_hg19_v1_chr1_+_3607235 AB055065 AB055066 AY040827 AY040828 AY040829 NM_001126240 NM_001126241 NM_001126242 NM_001204189 NM_001204190 NM_001204191 AK304177 AK304784	17178	+	AK310432 NM_001204192 AK302118	24535	+	TSC_hg19_v1_chr1_-_3663940 AB007964 BC035073 BC062467 BC089039	73837	-	BC117251|TP73|7161|tumor protein p73##BC117253|TP73|7161|tumor protein p73##NM_001204184|TP73|7161|tumor protein p73##NM_001204185|TP73|7161|tumor protein p73##NM_001204186|TP73|7161|tumor protein p73##NM_001204187|TP73|7161|tumor protein p73##NM_001204188|TP73|7161|tumor protein p73##NM_005427|TP73|7161|tumor protein p73##Y11416|TP73|7161|tumor protein p73##AB034912|WRAP73|49856|WD repeat containing, antisense to TP73##AK000437|WRAP73|49856|WD repeat containing, antisense to TP73##AK225525|WRAP73|49856|WD repeat containing, antisense to TP73##BC002611|WRAP73|49856|WD repeat containing, antisense to TP73##BC086311|WRAP73|49856|WD repeat containing, antisense to TP73##AK302397|WRAP73|49856|WD repeat containing, antisense to TP73##NM_017818|WRAP73|49856|WD repeat containing, antisense to TP73##AK298343|TPRG1L|127262|tumor protein p63 regulated 1-like##AK289919|TPRG1L|127262|tumor protein p63 regulated 1-like##BC019034|TPRG1L|127262|tumor protein p63 regulated 1-like##AB055065|TP73|7161|tumor protein p73##AB055066|TP73|7161|tumor protein p73##AY040827|TP73|7161|tumor protein p73##AY040828|TP73|7161|tumor protein p73##AY040829|TP73|7161|tumor protein p73##NM_001126240|TP73|7161|tumor protein p73##NM_001126241|TP73|7161|tumor protein p73##NM_001126242|TP73|7161|tumor protein p73##NM_001204189|TP73|7161|tumor protein p73##NM_001204190|TP73|7161|tumor protein p73##NM_001204191|TP73|7161|tumor protein p73##AK304177|TP73|7161|tumor protein p73##AK304784|TP73|7161|tumor protein p73##AK310432|TP73|7161|tumor protein p73##NM_001204192|TP73|7161|tumor protein p73##AK302118|TP73|7161|tumor protein p73##AB007964|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC035073|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)##BC089039|TP73-AS1|57212|TP73 antisense RNA 1 (non-protein coding)	0.0	
chr16	1663167	1663302	reg1035880.p2	3.944	+	TSC_hg19_v1_chr16_-_1662054 NM_014714	-1196	-	TSC_hg19_v1_chr16_-_1660720 AB011162 AK299035 AK299115	-2542	-	BC105785 AY358178 NM_024600	-79039	+	NM_020825	1406	+	AK309909 AK296998 NM_144570 TSC_hg19_v1_chr16_+_1728279 AK023154	65034	+	BC060853 TSC_hg19_v1_chr16_+_1728289	65052	+	NM_014714|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##AB011162|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##AK299035|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##AK299115|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##BC105785|TMEM204|79652|transmembrane protein 204##AY358178|TMEM204|79652|transmembrane protein 204##NM_024600|TMEM204|79652|transmembrane protein 204##NM_020825|CRAMP1L|57585|Crm, cramped-like (Drosophila)##AK309909|HN1L|90861|hematological and neurological expressed 1-like##AK296998|HN1L|90861|hematological and neurological expressed 1-like##NM_144570|HN1L|90861|hematological and neurological expressed 1-like##AK023154|HN1L|90861|hematological and neurological expressed 1-like##BC060853|HN1L|90861|hematological and neurological expressed 1-like	0.0	
chr17	46656036	46656203	reg1029249.p1	3.944	+	TSC_hg19_v1_chr17_-_46655544 AL137449 BC049204 NM_024015	-476	-	NM_002146 AK027609	-4291	-	EU446481 BC074805 BC074806 X16665 NM_002145	-33786	-	AK315102 TSC_hg19_v1_chr17_-_46667604 AK316245 AK291182	11494	-	AB464575 BC117247 NM_002147 TSC_hg19_v1_chr17_-_46671142 AK314964	14981	-	M92299 TSC_hg19_v1_chr17_-_46671405	15248	-	AL137449|HOXB4|3214|homeobox B4##BC049204|HOXB4|3214|homeobox B4##NM_024015|HOXB4|3214|homeobox B4##NM_002146|HOXB3|3213|homeobox B3##AK027609|HOXB3|3213|homeobox B3##EU446481|HOXB2|3212|homeobox B2##BC074805|HOXB2|3212|homeobox B2##BC074806|HOXB2|3212|homeobox B2##X16665|HOXB2|3212|homeobox B2##NM_002145|HOXB2|3212|homeobox B2##AK315102|HOXB3|3213|homeobox B3##AK316245|HOXB3|3213|homeobox B3##AK291182|HOXB3|3213|homeobox B3##BC117247|HOXB5|3215|homeobox B5##NM_002147|HOXB5|3215|homeobox B5##AK314964|HOXB5|3215|homeobox B5##M92299|HOXB5|3215|homeobox B5	0.0	
chr22	19941266	19941412	reg1034129.p1	3.944	+	NM_001135162 BC100018	-2291	+	NM_001135161 AK129492	-2823	+	TSC_hg19_v1_chr22_-_19929453 AF106697	-11859	-	AB462972 BT007125 CR456997 CU012983 CU013271 CU680120 DQ893411 DQ896732 FJ410132 TSC_hg19_v1_chr22_+_19950078 NM_007310 EF217321 EF217322 EF212883 FJ410131 CU674210	8843	+	TSC_hg19_v1_chr22_-_20004347 NM_001670 U51269	62984	-	TSC_hg19_v1_chr22_+_20008632 AK316056 BC041339 NM_152906 AK301054 AK301366 AK311676	67278	+	NM_001135162|COMT|1312|catechol-O-methyltransferase##BC100018|COMT|1312|catechol-O-methyltransferase##NM_001135161|COMT|1312|catechol-O-methyltransferase##AF106697|TXNRD2|10587|thioredoxin reductase 2##BT007125|COMT|1312|catechol-O-methyltransferase##CR456997|COMT|1312|catechol-O-methyltransferase##CU012983|COMT|1312|catechol-O-methyltransferase##CU013271|COMT|1312|catechol-O-methyltransferase##DQ893411|COMT|1312|catechol-O-methyltransferase##DQ896732|COMT|1312|catechol-O-methyltransferase##FJ410132|COMT|1312|catechol-O-methyltransferase##NM_007310|COMT|1312|catechol-O-methyltransferase##EF217321|COMT|1312|catechol-O-methyltransferase##EF217322|COMT|1312|catechol-O-methyltransferase##FJ410131|COMT|1312|catechol-O-methyltransferase##NM_001670|ARVCF|421|armadillo repeat gene deleted in velocardiofacial syndrome##U51269|ARVCF|421|armadillo repeat gene deleted in velocardiofacial syndrome##AK316056|C22orf25|128989|chromosome 22 open reading frame 25##BC041339|C22orf25|128989|chromosome 22 open reading frame 25##NM_152906|C22orf25|128989|chromosome 22 open reading frame 25##AK301054|C22orf25|128989|chromosome 22 open reading frame 25##AK301366|C22orf25|128989|chromosome 22 open reading frame 25##AK311676|C22orf25|128989|chromosome 22 open reading frame 25	1.113182	CTCF.p2:-6:0.986
chr4	40464433	40464573	reg1026113.p1	3.944	+	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	-127058	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-265862	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-405971	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	52081	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	53455	-	TSC_hg19_v1_chr4_-_40631882 BC034402 BC071585 NM_001098634	167362	-	BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47##BC034402|RBM47|54502|RNA binding motif protein 47##BC071585|RBM47|54502|RNA binding motif protein 47##NM_001098634|RBM47|54502|RNA binding motif protein 47	0.13465	
chr11	47255622	47255735	reg1028883.p2	3.943	+	NM_000107 U18300 TSC_hg19_v1_chr11_+_47236524 AK313262 BC050455 AK091640 AX747106 BC000093 AB527602 AB107037 AB107038 AB107039 AB107040 BT007139 CU674030 DQ890719	-19089	+	BC007914 AF149825 TSC_hg19_v1_chr11_-_47207959 AF242530 AK300658 BC011889 NM_001184974 NM_016223	-47696	-	AK300968 AK000577 NM_001184975	-48250	-	AK311590 NM_001251934 NM_001251935 AK302132	14177	+	AK298439 TSC_hg19_v1_chr11_-_47270266	14544	-	DQ892669 DQ895913 BC003160 TSC_hg19_v1_chr11_-_47270357 X12548 AK298122 AK097626 AK300569 AK300931 AK301860 AK308512 BC093010 AK299382 AK300911 AK303894 AK311431 NM_001131064 NM_001610	14719	-	NM_000107|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##U18300|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AK313262|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BC050455|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AK091640|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BC000093|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107037|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107038|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107039|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107040|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BT007139|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##DQ890719|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BC007914|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AF149825|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AF242530|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AK300658|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##BC011889|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##NM_001184974|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##NM_016223|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AK300968|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AK000577|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##NM_001184975|PACSIN3|29763|protein kinase C and casein kinase substrate in neurons 3##AK311590|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##NM_001251934|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##NM_001251935|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK302132|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK298439|ACP2|53|acid phosphatase 2, lysosomal##DQ892669|ACP2|53|acid phosphatase 2, lysosomal##DQ895913|ACP2|53|acid phosphatase 2, lysosomal##BC003160|ACP2|53|acid phosphatase 2, lysosomal##X12548|ACP2|53|acid phosphatase 2, lysosomal##AK298122|ACP2|53|acid phosphatase 2, lysosomal##AK300569|ACP2|53|acid phosphatase 2, lysosomal##AK300931|ACP2|53|acid phosphatase 2, lysosomal##AK301860|ACP2|53|acid phosphatase 2, lysosomal##AK308512|ACP2|53|acid phosphatase 2, lysosomal##BC093010|ACP2|53|acid phosphatase 2, lysosomal##AK299382|ACP2|53|acid phosphatase 2, lysosomal##AK300911|ACP2|53|acid phosphatase 2, lysosomal##AK303894|ACP2|53|acid phosphatase 2, lysosomal##AK311431|ACP2|53|acid phosphatase 2, lysosomal##NM_001131064|ACP2|53|acid phosphatase 2, lysosomal##NM_001610|ACP2|53|acid phosphatase 2, lysosomal	0.932432	CTCF.p2:-2:0.932
chr19	35953469	35953631	reg1020016.p1	3.943	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	-12933	+	AK290710 NM_005304 BC035657	-104056	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	-111100	+	AM392574 AM392667 AM392672 AM392738 AM392847 AM392851 AM393397 AM393477 AY359007 HQ258707 BC130501 NM_001244847 NM_207392	27838	-	AY622964 AY789707 AF086315 AL832080 NM_001035516	39255	-	AY789698 AY789699 AY789700 AY789701 AY789702 AY789703 AY789704 AY789705 AY789706 BC011886 TSC_hg19_v1_chr19_-_36001373 AK096215 AK304668 AK316475 EF158323 NM_001126059 EF158324 EF158325 EF158326	47823	-	AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2##AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##AM392574|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392667|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392672|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392738|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392847|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392851|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393397|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393477|KRTDAP|388533|keratinocyte differentiation-associated protein##AY359007|KRTDAP|388533|keratinocyte differentiation-associated protein##HQ258707|KRTDAP|388533|keratinocyte differentiation-associated protein##BC130501|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_001244847|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_207392|KRTDAP|388533|keratinocyte differentiation-associated protein##AY622964|DMKN|93099|dermokine##AY789707|DMKN|93099|dermokine##AF086315|DMKN|93099|dermokine##AL832080|DMKN|93099|dermokine##NM_001035516|DMKN|93099|dermokine##AY789698|DMKN|93099|dermokine##AY789699|DMKN|93099|dermokine##AY789700|DMKN|93099|dermokine##AY789701|DMKN|93099|dermokine##AY789702|DMKN|93099|dermokine##AY789703|DMKN|93099|dermokine##AY789704|DMKN|93099|dermokine##AY789705|DMKN|93099|dermokine##AY789706|DMKN|93099|dermokine##BC011886|DMKN|93099|dermokine##AK096215|DMKN|93099|dermokine##AK304668|DMKN|93099|dermokine##AK316475|DMKN|93099|dermokine##EF158323|DMKN|93099|dermokine##NM_001126059|DMKN|93099|dermokine##EF158324|DMKN|93099|dermokine##EF158325|DMKN|93099|dermokine##EF158326|DMKN|93099|dermokine	0.0	
chr21	36359440	36359613	reg1035778.p1	3.943	+	TSC_hg19_v1_chr21_-_36260987 BC050363 X79549 D43967 D43968 NM_001001890 NM_001122607	-98545	-	L34598 D10570 TSC_hg19_v1_chr21_-_36260304	-99329	-	AF312386 AF312387 AY004251 TSC_hg19_v1_chr21_-_36259416 S60998	-100114	-	AB384992 AF419247 U19601 BC110828 TSC_hg19_v1_chr21_-_36421376 AK226159	61760	-	BC136380 BC136381 BC144053 TSC_hg19_v1_chr21_-_36421490	61952	-	TSC_hg19_v1_chr21_-_36421575 X90979	62041	-	BC050363|RUNX1|861|runt-related transcription factor 1##X79549|RUNX1|861|runt-related transcription factor 1##D43967|RUNX1|861|runt-related transcription factor 1##D43968|RUNX1|861|runt-related transcription factor 1##NM_001001890|RUNX1|861|runt-related transcription factor 1##NM_001122607|RUNX1|861|runt-related transcription factor 1##L34598|RUNX1|861|runt-related transcription factor 1##D10570|RUNX1|861|runt-related transcription factor 1##S60998|RUNX1|861|runt-related transcription factor 1##U19601|RUNX1|861|runt-related transcription factor 1##BC110828|RUNX1|861|runt-related transcription factor 1##AK226159|RUNX1|861|runt-related transcription factor 1##BC136380|RUNX1|861|runt-related transcription factor 1##BC136381|RUNX1|861|runt-related transcription factor 1##BC144053|RUNX1|861|runt-related transcription factor 1##X90979|RUNX1|861|runt-related transcription factor 1	0.0	
chr6	5994791	5994884	reg1032257.p2	3.943	+	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-733147	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-733575	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-733671	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	12304	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	12860	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	326048	-	NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide	0.162185	
chr6	85484584	85484691	reg1034572.p1	3.943	+	HQ258462 NM_001080508 BC157841 BC132715	-10712	-	AK310179 BC040697 TSC_hg19_v1_chr6_-_85473172	-11467	-	TSC_hg19_v1_chr6_-_85472330 AJ010278	-12312	-	NM_001204813 NM_002526 TSC_hg19_v1_chr6_+_86159433	674735	+	TSC_hg19_v1_chr6_+_86159827 AK314661 AX772810 X55740 BC015940 AK075008 BC065937 DQ186653	675178	+	BC046520 AY044865 CU686683 TSC_hg19_v1_chr6_-_86303440 BC095419	818756	-	HQ258462|TBX18|9096|T-box 18##NM_001080508|TBX18|9096|T-box 18##BC157841|TBX18|9096|T-box 18##BC132715|TBX18|9096|T-box 18##AK310179|TBX18|9096|T-box 18##BC040697|TBX18|9096|T-box 18##AJ010278|TBX18|9096|T-box 18##NM_001204813|NT5E|4907|5'-nucleotidase, ecto (CD73)##NM_002526|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK314661|NT5E|4907|5'-nucleotidase, ecto (CD73)##X55740|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC015940|NT5E|4907|5'-nucleotidase, ecto (CD73)##AK075008|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC065937|NT5E|4907|5'-nucleotidase, ecto (CD73)##DQ186653|NT5E|4907|5'-nucleotidase, ecto (CD73)##BC046520|SNX14|57231|sorting nexin 14##AY044865|SNX14|57231|sorting nexin 14##BC095419|SNX14|57231|sorting nexin 14	0.653067	CTCF.p2:-24:0.653
chr7	7954377	7954471	reg1034160.p1	3.943	+	BC009868 NM_002947	-196187	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-274051	+	BT007320 AB464142 TSC_hg19_v1_chr7_-_7680067 L07493 BC005264 AK311842	-274337	-	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	54009	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	347292	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	347367	-	BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##BT007320|RPA3|6119|replication protein A3, 14kDa##L07493|RPA3|6119|replication protein A3, 14kDa##BC005264|RPA3|6119|replication protein A3, 14kDa##AK311842|RPA3|6119|replication protein A3, 14kDa##NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr15	62126615	62126779	reg1004730.p2	3.942	+	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	-605200	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	-605273	-	U04899 U04898 NM_002943 NM_134260	-1207012	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	225917	-	NM_207322 AF504646	232491	+	NM_001007595	330784	-	NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B	0.0	
chr17	27945120	27945209	reg1028759.p3	3.942	+	TSC_hg19_v1_chr17_+_27920483 NM_152345	-24662	+	TSC_hg19_v1_chr17_-_27916646 AK294785 BC048196	-28509	-	TSC_hg19_v1_chr17_-_27916606 BC067358 NM_001085454 NM_014030	-28558	-	AK096431 NM_032854	3228	-	BC028205 TSC_hg19_v1_chr17_-_27949878 AL833952	4687	-	TSC_hg19_v1_chr17_-_28088446 BC011636	143294	-	NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B##AK294785|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC048196|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC067358|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_001085454|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_014030|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AK096431|CORO6|84940|coronin 6##NM_032854|CORO6|84940|coronin 6##BC028205|CORO6|84940|coronin 6##AL833952|CORO6|84940|coronin 6##BC011636|SSH2|85464|slingshot homolog 2 (Drosophila)	0.095916	
chr17	29865126	29865210	reg1028999.p1	3.942	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-50107	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-146304	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-146501	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	321103	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	363498	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	363563	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.0	
chr17	38738870	38739051	reg1031735.p2	3.942	+	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	-17242	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	-81114	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-139141	+	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	65110	-	BC069196 TSC_hg19_v1_chr17_-_38804818	65836	-	BX538083 EU832123 EU832217 BC032815 AK092967 AK308598 NM_152349	82390	-	BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC069196|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BX538083|KRT222|125113|keratin 222##EU832123|KRT222|125113|keratin 222##EU832217|KRT222|125113|keratin 222##BC032815|KRT222|125113|keratin 222##AK308598|KRT222|125113|keratin 222##NM_152349|KRT222|125113|keratin 222	0.0	
chr20	46619693	46619815	reg1037511.p2	3.942	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-204436	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-205002	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-489070	+	AB037836 TSC_hg19_v1_chr20_-_47444291	824532	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	824685	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	918564	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr2	127534750	127534930	reg1001100.p2	3.942	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-121048	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-121133	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2751976	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	329901	-	BC039307 NM_001001665	428502	-	AK131190 TSC_hg19_v1_chr2_-_127977781	442877	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.0	
chr4	140578314	140578425	reg1034640.p1	3.942	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-100936	-	AL136904 NM_031296	-203409	+	TSC_hg19_v1_chr4_-_140374867 AK097885	-203495	-	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	8621	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	8765	+	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	495969	-	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AL136904|RAB33B|83452|RAB33B, member RAS oncogene family##NM_031296|RAB33B|83452|RAB33B, member RAS oncogene family##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)	0.232866	
chr6	108188275	108188406	reg1034470.p2	3.942	+	AK303562 AK074125 TSC_hg19_v1_chr6_-_108145518 AK093571 AX748208 NM_198081	-42824	-	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	-376912	+	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	-407610	-	AF100141 CU690382 CU690568 BC001153 TSC_hg19_v1_chr6_-_108279282 AK074835	90917	-	TSC_hg19_v1_chr6_-_108279316 AJ011779	90972	-	TSC_hg19_v1_chr6_-_108279346 BC048287 AK001465 BC047221	90993	-	AK303562|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK074125|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK093571|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_198081|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)##AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC048287|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK001465|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC047221|SEC63|11231|SEC63 homolog (S. cerevisiae)	0.97091	CTCF.p2:25:0.971
chr9	117965854	117966007	reg1035017.p2	3.942	+	AB022761 NM_017418	-61834	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-85457	-	AK313619 NM_001244 NM_001252290	-273056	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	950140	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	1483532	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	1483676	+	AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32	0.654396	CTCF.p2:-28:0.654
chr11	109826894	109827058	reg1037137.p1	3.941	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-534077	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-534133	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-1291162	+	AK095101 TSC_hg19_v1_chr11_+_109963524	136552	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	137154	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	340337	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.0	
chr1	72652545	72652629	reg1034903.p1	3.941	+	NM_005455 NM_203350	-1105616	-	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	-1105880	-	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	-1139208	-	TSC_hg19_v1_chr1_-_72748182 AK295481 BX538014 AK092307 AX747470 NM_173808	95624	-	TSC_hg19_v1_chr1_-_72748491 AY358132	95918	-	AK131476 BC020778 BX647210 TSC_hg19_v1_chr1_-_74663861 NM_001105659	2011261	-	NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK295481|NEGR1|257194|neuronal growth regulator 1##BX538014|NEGR1|257194|neuronal growth regulator 1##AK092307|NEGR1|257194|neuronal growth regulator 1##NM_173808|NEGR1|257194|neuronal growth regulator 1##AK131476|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BC020778|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BX647210|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001105659|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3	0.992105	CTCF.p2:8:0.992
chr19	50431992	50432087	reg1036306.p1	3.941	+	NM_012068 AK290592	-51	+	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	-18937	-	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	-31886	-	NM_001193646 AK091985 AB021663 AK024402 TSC_hg19_v1_chr19_+_50432461 AB073613 BC005174	395	+	AJ880387 TSC_hg19_v1_chr19_-_50432664 AJ880386	618	-	AJ880389 TSC_hg19_v1_chr19_-_50432676	635	-	NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5##CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##NM_001193646|ATF5|22809|activating transcription factor 5##AK091985|ATF5|22809|activating transcription factor 5##AB021663|ATF5|22809|activating transcription factor 5##AK024402|ATF5|22809|activating transcription factor 5##AB073613|ATF5|22809|activating transcription factor 5##BC005174|ATF5|22809|activating transcription factor 5##AJ880387|IL4I1|259307|interleukin 4 induced 1##AJ880386|IL4I1|259307|interleukin 4 induced 1##AJ880389|IL4I1|259307|interleukin 4 induced 1	0.0	
chr2	3645265	3645410	reg1034724.p1	3.941	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-2768	+	X74803 TSC_hg19_v1_chr2_+_3627765	-17592	+	TSC_hg19_v1_chr2_+_3623128 BC071919 AB464168 DQ892985 DQ896234 M77233 AF085824	-22172	+	AK302299 NM_018436 BC029652	60460	+	U23752 AB028641 NM_003108 BC025789 AB464713	2187478	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	3360563	-	AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##X74803|RPS7|6201|ribosomal protein S7##BC071919|RPS7|6201|ribosomal protein S7##DQ892985|RPS7|6201|ribosomal protein S7##DQ896234|RPS7|6201|ribosomal protein S7##M77233|RPS7|6201|ribosomal protein S7##AF085824|RPS7|6201|ribosomal protein S7##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	0.0	
chr3	49066695	49066876	reg1035779.p1	3.941	+	TSC_hg19_v1_chr3_-_49066760 CU680406 DQ893403 DQ896721 AB527256	-13	-	TSC_hg19_v1_chr3_+_49059553 BC002873	-7254	+	TSC_hg19_v1_chr3_+_49059073 AL049955 NM_199069 NM_199070	-7714	+	BC009236 BC015567 BC012840 J04208 BC006124 TSC_hg19_v1_chr3_-_49066832 AK293397	45	-	TSC_hg19_v1_chr3_-_49066865 NM_000884	85	-	AK292536 TSC_hg19_v1_chr3_-_49130931	64136	-	DQ893403|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2##DQ896721|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2##BC002873|NDUFAF3|25915|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3##AL049955|NDUFAF3|25915|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3##NM_199069|NDUFAF3|25915|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3##NM_199070|NDUFAF3|25915|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3##BC009236|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2##BC015567|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2##BC012840|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2##J04208|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2##BC006124|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2##AK293397|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2##NM_000884|IMPDH2|3615|IMP (inosine 5'-monophosphate) dehydrogenase 2##AK292536|QRICH1|54870|glutamine-rich 1	0.0	
chr10	121464093	121464273	reg1035949.p2	3.940	+	TSC_hg19_v1_chr10_+_121411086 BC001445 AK291333 BC014656 DQ893416 DQ896772 CU675397 AB385565	-53047	+	TSC_hg19_v1_chr10_+_121411079 BC107786	-53108	+	TSC_hg19_v1_chr10_+_121411053 AL137582	-53130	+	TSC_hg19_v1_chr10_+_121485568 NM_001243195 NM_014937 AK307758	21355	+	TSC_hg19_v1_chr10_+_121485596 BC067820 AB023183	21431	+	TSC_hg19_v1_chr10_+_121485653 BC111493 BC052367 BC082755 AB385409	21522	+	AK291333|BAG3|9531|BCL2-associated athanogene 3##BC014656|BAG3|9531|BCL2-associated athanogene 3##DQ893416|BAG3|9531|BCL2-associated athanogene 3##DQ896772|BAG3|9531|BCL2-associated athanogene 3##BC107786|BAG3|9531|BCL2-associated athanogene 3##AL137582|BAG3|9531|BCL2-associated athanogene 3##NM_001243195|INPP5F|22876|inositol polyphosphate-5-phosphatase F##NM_014937|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK307758|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC067820|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AB023183|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC111493|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC052367|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC082755|INPP5F|22876|inositol polyphosphate-5-phosphatase F	0.0	
chr11	72865380	72865547	reg1033280.p1	3.940	+	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	-12414	-	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-339981	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-340058	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	63881	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	63983	+	AK313942 TSC_hg19_v1_chr11_+_72929608	64153	+	AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.0	
chr1	245544254	245544346	reg1035129.p2	3.940	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-225992	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-410617	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-410670	+	AK024733 NM_022743	1036411	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	1126254	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	1126308	-	AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3	0.88688	CTCF.p2:1:0.887
chr16	70414959	70415077	reg1035178.p1	3.940	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-34190	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-81870	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-81942	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	57963	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	73481	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	87822	+	AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##AK096727|FUK|197258|fucokinase	0.574418	CTCF.p2:-43:0.574
chr2	145140484	145140665	reg1028862.p1	3.940	+	BX647773 TSC_hg19_v1_chr2_-_145090075 BX647436 NM_001164629	-50510	-	BC017741 AK291357 TSC_hg19_v1_chr2_-_145090037 BC061699	-50542	-	AY281366 NM_001006636	-88515	-	AB193095 AB193096 AB463360 TSC_hg19_v1_chr2_-_145274968	134368	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	134629	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	137057	-	BX647773|GTDC1|79712|glycosyltransferase-like domain containing 1##BX647436|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001164629|GTDC1|79712|glycosyltransferase-like domain containing 1##BC017741|GTDC1|79712|glycosyltransferase-like domain containing 1##AK291357|GTDC1|79712|glycosyltransferase-like domain containing 1##BC061699|GTDC1|79712|glycosyltransferase-like domain containing 1##AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1##AB193095|ZEB2|9839|zinc finger E-box binding homeobox 2##AB193096|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2	0.0	
chr5	174163157	174163245	reg1032120.p1	3.940	+	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	-11589	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-690449	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	-690490	+	NM_000794	707961	-	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	742361	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	921837	+	NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein##NM_000794|DRD1|1812|dopamine receptor D1##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2	0.247409	CTCF.p2:-8:0.247
chr6	10404320	10404447	reg1032619.p2	3.940	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-1968495	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-1968675	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-2301593	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	8233	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	10892	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	11085	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.0	
chr7	106420517	106420619	reg1033527.p1	3.940	+	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	-119065	-	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	-495045	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	-495206	-	TSC_hg19_v1_chr7_+_106505701 AK292684	85145	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	85206	+	TSC_hg19_v1_chr7_+_106505893 NM_002649 X83368	85361	+	AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74##BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	0.889255	CTCF.p2:15:0.889
chr12	108001624	108001690	reg1001029.p2	3.939	+	AK127295 NM_001017523	-27024	+	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	-289444	+	TSC_hg19_v1_chr12_-_107487630 NM_004075	-514047	-	TSC_hg19_v1_chr12_+_108079586 AK297961 BC010921 AK223162 BC032127 BC001652 L07758 NM_007062 BC046144 BC040135 BC000067 AK290681 DQ892735 DQ895982 DQ896014 CU674810 CU679850 AK296252	78010	+	AK056378 TSC_hg19_v1_chr12_-_108154899	153182	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	153253	-	AK127295|BTBD11|121551|BTB (POZ) domain containing 11##NM_001017523|BTBD11|121551|BTB (POZ) domain containing 11##BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11##NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##AK297961|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC010921|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK223162|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC032127|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC001652|PWP1|11137|PWP1 homolog (S. cerevisiae)##L07758|PWP1|11137|PWP1 homolog (S. cerevisiae)##NM_007062|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC046144|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC040135|PWP1|11137|PWP1 homolog (S. cerevisiae)##BC000067|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK290681|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ892735|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ895982|PWP1|11137|PWP1 homolog (S. cerevisiae)##DQ896014|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK296252|PWP1|11137|PWP1 homolog (S. cerevisiae)##AK056378|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4	0.0	
chr12	124816728	124816842	reg1040241.p1	3.939	+	AK126577 NM_181709	-43076	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-359056	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-359586	-	TSC_hg19_v1_chr12_-_125002875 BC033087	186074	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	235290	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	531520	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr17	7036142	7036283	reg1030100.p1	3.939	+	X55283 TSC_hg19_v1_chr17_-_7018083 BC017251 NM_001181 NM_001201352 NM_080912 NM_080913 AK310123 AK303787	-18042	-	X55284 TSC_hg19_v1_chr17_-_7018008 M11025	-18223	-	AF529374 U97197 AB528625 CU677885 DQ892652 DQ895891 NM_080914	-18619	-	BC032130 TSC_hg19_v1_chr17_-_7082568	46352	-	M10058 AB070933 TSC_hg19_v1_chr17_-_7082680 AK308375 AK124286 NM_001197216 NM_001671	46556	-	TSC_hg19_v1_chr17_-_7106561 BC040533	70382	-	X55283|ASGR2|433|asialoglycoprotein receptor 2##BC017251|ASGR2|433|asialoglycoprotein receptor 2##NM_001181|ASGR2|433|asialoglycoprotein receptor 2##NM_001201352|ASGR2|433|asialoglycoprotein receptor 2##NM_080912|ASGR2|433|asialoglycoprotein receptor 2##NM_080913|ASGR2|433|asialoglycoprotein receptor 2##AK310123|ASGR2|433|asialoglycoprotein receptor 2##AK303787|ASGR2|433|asialoglycoprotein receptor 2##X55284|ASGR2|433|asialoglycoprotein receptor 2##M11025|ASGR2|433|asialoglycoprotein receptor 2##AF529374|ASGR2|433|asialoglycoprotein receptor 2##U97197|ASGR2|433|asialoglycoprotein receptor 2##DQ892652|ASGR2|433|asialoglycoprotein receptor 2##DQ895891|ASGR2|433|asialoglycoprotein receptor 2##NM_080914|ASGR2|433|asialoglycoprotein receptor 2##BC032130|ASGR1|432|asialoglycoprotein receptor 1##M10058|ASGR1|432|asialoglycoprotein receptor 1##AB070933|ASGR1|432|asialoglycoprotein receptor 1##AK308375|ASGR1|432|asialoglycoprotein receptor 1##AK124286|ASGR1|432|asialoglycoprotein receptor 1##NM_001197216|ASGR1|432|asialoglycoprotein receptor 1##NM_001671|ASGR1|432|asialoglycoprotein receptor 1##BC040533|DLG4|1742|discs, large homolog 4 (Drosophila)	0.0	
chr3	195926375	195926496	reg1039965.p2	3.939	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-117419	-	TSC_hg19_v1_chr3_-_195808984 M11507	-117452	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-117474	-	BC034801 BC022078 NM_001039617 AK122907	11846	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	16959	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	88100	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr5	116007119	116007300	reg1023444.p2	3.939	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-96695	-	TSC_hg19_v1_chr5_+_115898220 D28352	-108985	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-586488	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2317029	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2399602	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2399956	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr8	110047223	110047348	reg1031441.p1	3.939	+	AK055230 NM_153015 BC033057 BC030710	-247479	-	TSC_hg19_v1_chr8_+_109455874 AK290974 D14659 AB384437 CR457402 CU676696 CU692380 HQ447150	-591405	+	TSC_hg19_v1_chr8_+_109455865 BC021667 NM_014673 AK222615 BC007027 BC020753	-591433	+	BC105045 BC113360 NM_003301 X72089 D16845 AY493373 HQ258206 X75071	52411	+	AF283302 AK311583 AF521133 NM_001128211 AK307663	294849	-	AK301278 TSC_hg19_v1_chr8_-_110346317 BC000967 AK027897 BC043406 AK315006 BC031258 NM_032869 AF283301	299086	-	AK055230|TMEM74|157753|transmembrane protein 74##NM_153015|TMEM74|157753|transmembrane protein 74##BC030710|TMEM74|157753|transmembrane protein 74##AK290974|TTC35|9694|tetratricopeptide repeat domain 35##D14659|TTC35|9694|tetratricopeptide repeat domain 35##CR457402|TTC35|9694|tetratricopeptide repeat domain 35##HQ447150|TTC35|9694|tetratricopeptide repeat domain 35##BC021667|TTC35|9694|tetratricopeptide repeat domain 35##NM_014673|TTC35|9694|tetratricopeptide repeat domain 35##AK222615|TTC35|9694|tetratricopeptide repeat domain 35##BC007027|TTC35|9694|tetratricopeptide repeat domain 35##BC020753|TTC35|9694|tetratricopeptide repeat domain 35##BC105045|TRHR|7201|thyrotropin-releasing hormone receptor##BC113360|TRHR|7201|thyrotropin-releasing hormone receptor##NM_003301|TRHR|7201|thyrotropin-releasing hormone receptor##X72089|TRHR|7201|thyrotropin-releasing hormone receptor##D16845|TRHR|7201|thyrotropin-releasing hormone receptor##AY493373|TRHR|7201|thyrotropin-releasing hormone receptor##HQ258206|TRHR|7201|thyrotropin-releasing hormone receptor##X75071|TRHR|7201|thyrotropin-releasing hormone receptor##AF283302|NUDCD1|84955|NudC domain containing 1##AK311583|NUDCD1|84955|NudC domain containing 1##AF521133|NUDCD1|84955|NudC domain containing 1##NM_001128211|NUDCD1|84955|NudC domain containing 1##AK307663|NUDCD1|84955|NudC domain containing 1##AK301278|NUDCD1|84955|NudC domain containing 1##BC000967|NUDCD1|84955|NudC domain containing 1##AK027897|NUDCD1|84955|NudC domain containing 1##BC043406|NUDCD1|84955|NudC domain containing 1##AK315006|NUDCD1|84955|NudC domain containing 1##BC031258|NUDCD1|84955|NudC domain containing 1##NM_032869|NUDCD1|84955|NudC domain containing 1##AF283301|NUDCD1|84955|NudC domain containing 1	0.740423	CTCF.p2:27:0.740
chr10	22518355	22518535	reg1039856.p2	3.938	+	NM_001199938	-19534	-	TSC_hg19_v1_chr10_-_22292660 BC110894 NM_022365 AK308369	-225780	-	AY225122 AK027263 TSC_hg19_v1_chr10_-_22292522 BC014436	-225996	-	TSC_hg19_v1_chr10_+_22540999 AK094582	22568	+	TSC_hg19_v1_chr10_+_22605316 NM_001204062 NM_012071 BX647275 AF201948 BC022898 AF078848 AK128789 AK313235 AK295109 AY542159	86880	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	91720	+	NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1##BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AY225122|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK027263|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC014436|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK094582|LOC100130992|100130992|uncharacterized LOC100130992##NM_001204062|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough##NM_012071|COMMD3|23412|COMM domain containing 3##BX647275|COMMD3|23412|COMM domain containing 3##AF201948|COMMD3|23412|COMM domain containing 3##BC022898|COMMD3|23412|COMM domain containing 3##AF078848|COMMD3|23412|COMM domain containing 3##AK128789|COMMD3|23412|COMM domain containing 3##AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough##AY542159|COMMD3|23412|COMM domain containing 3##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene	0.0	
chr12	104856773	104856908	reg1034843.p2	3.938	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-5753	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-6032	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-6069	+	TSC_hg19_v1_chr12_+_105153261 AF131762	296437	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	465423	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	523250	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.0	
chr13	75793822	75793904	reg1003255.p1	3.938	+	TSC_hg19_v1_chr13_-_74708425 AK291397	-1085467	-	AF161471 AF113122 NM_007249	-1085874	-	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-2160659	+	CR749622 TSC_hg19_v1_chr13_-_75901948	108059	-	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	262475	-	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	318115	-	AK291397|KLF12|11278|Kruppel-like factor 12##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##CR749622|TBC1D4|9882|TBC1 domain family, member 4##AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6	0.0	
chr15	62637226	62637366	reg1029356.p1	3.938	+	NM_001007595	-179815	-	NM_207322 AF504646	-278108	+	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	-284682	-	TSC_hg19_v1_chr15_+_62682748 AB621808	45422	+	AF402000 NM_015059	302213	+	TSC_hg19_v1_chr15_+_63050761 BX648144 BX648146	413478	+	NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B##NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB621808|TLN2|83660|talin 2##AF402000|TLN2|83660|talin 2##NM_015059|TLN2|83660|talin 2##BX648144|TLN2|83660|talin 2##BX648146|TLN2|83660|talin 2	0.010515	
chr19	13261180	13261303	reg1037684.p2	3.938	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-102	-	AF035531 CR457110 NM_003765 CU677875 BC095459 TSC_hg19_v1_chr19_-_13261045 AY778966	-208	-	TSC_hg19_v1_chr19_+_13250072 AK123056	-11124	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	51	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	2939	+	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	355935	-	BC017237|STX10|8677|syntaxin 10##AF035531|STX10|8677|syntaxin 10##CR457110|STX10|8677|syntaxin 10##NM_003765|STX10|8677|syntaxin 10##BC095459|STX10|8677|syntaxin 10##AY778966|STX10|8677|syntaxin 10##AK123056|NACC1|112939|nucleus accumbens associated 1, BEN and BTB (POZ) domain containing##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	0.0485	
chr19	56028032	56028181	reg1000185.p1	3.938	+	TSC_hg19_v1_chr19_+_55999923 EU699476 EU699477	-28179	+	TSC_hg19_v1_chr19_+_55999863 AK092577 AX747607 NM_001144950 NM_001195267	-28242	+	TSC_hg19_v1_chr19_+_55996577 NM_020378 AF086533 BC019079 AB038651	-31534	+	NM_001101401	20328	-	NM_001199824	28802	-	TSC_hg19_v1_chr19_-_56092206 AK092772 AX747719 NM_152600	64108	-	EU699476|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##EU699477|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##AK092577|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##NM_001144950|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##NM_001195267|SSC5D|284297|scavenger receptor cysteine rich domain containing (5 domains)##NM_020378|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##AF086533|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##BC019079|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##AB038651|NAT14|57106|N-acetyltransferase 14 (GCN5-related, putative)##NM_001101401|SBK2|646643|SH3-binding domain kinase family, member 2##NM_001199824|SGK110|100130827|putative uncharacterized serine/threonine-protein kinase SgK110-like##AK092772|ZNF579|163033|zinc finger protein 579##NM_152600|ZNF579|163033|zinc finger protein 579	0.0	
chr2	182435940	182436040	reg1032808.p1	3.938	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	-113668	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	-113940	+	NM_000885	-114372	+	AJ697855 AJ697856 AY357073 AY690329 AY690330 AY690331 AY690332 AY690333 AJ640141 AJ697858 BC137498 BC137499 AK293844 NM_001030311 NM_001030312 NM_001030313 NM_001160277 NM_201548 TSC_hg19_v1_chr2_-_182521833 HQ426666 HQ426667 HQ426668 HQ426669 HQ426670	85801	-	BC009046 TSC_hg19_v1_chr2_-_182545243 AB593068 AB593070 AB593071 AK313799 AB593069 D82347 HQ426678 JF290420 NM_002500	109311	-	TSC_hg19_v1_chr2_+_182756494 NM_001130445 NM_006751 AK093143 AX747951 AB067514	320541	+	X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ697855|CERKL|375298|ceramide kinase-like##AJ697856|CERKL|375298|ceramide kinase-like##AY357073|CERKL|375298|ceramide kinase-like##AY690329|CERKL|375298|ceramide kinase-like##AY690330|CERKL|375298|ceramide kinase-like##AY690331|CERKL|375298|ceramide kinase-like##AY690332|CERKL|375298|ceramide kinase-like##AY690333|CERKL|375298|ceramide kinase-like##AJ640141|CERKL|375298|ceramide kinase-like##AJ697858|CERKL|375298|ceramide kinase-like##BC137498|CERKL|375298|ceramide kinase-like##BC137499|CERKL|375298|ceramide kinase-like##AK293844|CERKL|375298|ceramide kinase-like##NM_001030311|CERKL|375298|ceramide kinase-like##NM_001030312|CERKL|375298|ceramide kinase-like##NM_001030313|CERKL|375298|ceramide kinase-like##NM_001160277|CERKL|375298|ceramide kinase-like##NM_201548|CERKL|375298|ceramide kinase-like##HQ426667|CERKL|375298|ceramide kinase-like##BC009046|NEUROD1|4760|neurogenic differentiation 1##AB593068|NEUROD1|4760|neurogenic differentiation 1##AB593070|NEUROD1|4760|neurogenic differentiation 1##AB593071|NEUROD1|4760|neurogenic differentiation 1##AK313799|NEUROD1|4760|neurogenic differentiation 1##AB593069|NEUROD1|4760|neurogenic differentiation 1##D82347|NEUROD1|4760|neurogenic differentiation 1##HQ426678|CERKL|375298|ceramide kinase-like##JF290420|CERKL|375298|ceramide kinase-like##NM_002500|NEUROD1|4760|neurogenic differentiation 1##NM_001130445|SSFA2|6744|sperm specific antigen 2##NM_006751|SSFA2|6744|sperm specific antigen 2##AB067514|SSFA2|6744|sperm specific antigen 2	0.0	
chr6	114076889	114077024	reg1034761.p1	3.938	+	AK122906 NM_001013734	-1408425	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1501061	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-1501151	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	101778	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	215316	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	215380	-	AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2	0.0	
chr1	228155647	228155827	reg1025753.p1	3.937	+	AB590917 HQ258230 AB060283 AK131041 TSC_hg19_v1_chr1_-_228135634 BC111960 BC113431 NM_003395	-20106	-	BC130400 HQ258179 NM_183062	-152356	+	CU676318 TSC_hg19_v1_chr1_+_227923140 BX648570 AK054633 BC011145 BC007786	-232605	+	NM_033131 AK056278 BC103921 BC103922 BC103923 AB060284	39036	+	AK000620 NM_001024226 NM_001658 TSC_hg19_v1_chr1_+_228270371	114634	+	TSC_hg19_v1_chr1_+_228270422 BC011358 AK293553 AK297792 AK057875 AF052179	114673	+	HQ258230|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AB060283|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AK131041|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC111960|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC113431|WNT9A|7483|wingless-type MMTV integration site family, member 9A##NM_003395|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC130400|PRSS38|339501|protease, serine, 38##HQ258179|PRSS38|339501|protease, serine, 38##NM_183062|PRSS38|339501|protease, serine, 38##BX648570|SNAP47|116841|synaptosomal-associated protein, 47kDa##AK054633|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC011145|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC007786|SNAP47|116841|synaptosomal-associated protein, 47kDa##NM_033131|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK056278|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103921|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103922|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103923|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AB060284|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK000620|ARF1|375|ADP-ribosylation factor 1##NM_001024226|ARF1|375|ADP-ribosylation factor 1##NM_001658|ARF1|375|ADP-ribosylation factor 1##BC011358|ARF1|375|ADP-ribosylation factor 1##AK293553|ARF1|375|ADP-ribosylation factor 1##AK297792|ARF1|375|ADP-ribosylation factor 1##AK057875|ARF1|375|ADP-ribosylation factor 1##AF052179|ARF1|375|ADP-ribosylation factor 1	0.873411	CTCF.p2:-36:0.873
chr19	7398704	7398801	reg1029336.p1	3.937	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	-104792	-	TSC_hg19_v1_chr19_-_7099547 AK127494	-299201	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-329037	+	TSC_hg19_v1_chr19_+_7460030 NM_015318	61255	+	TSC_hg19_v1_chr19_+_7460061 AB011093	61325	+	AK127045 NM_001130955	105821	+	BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AK127045|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##NM_001130955|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr21	45577497	45577604	reg1022824.p1	3.937	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-23989	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-24045	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-50251	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	83216	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	83307	-	AF194032 NM_013369 NM_175867	104548	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr2	204937277	204937420	reg1033993.p1	3.937	+	AK314985 AJ277832 NM_012092 BC028006 BC028210 AB023135 AF218312 CU688368 CU688430	-135854	+	BC070162 AF414120 NM_001037631 NM_005214 AK313732 BC069566 BC074893 BC074842 AB590653 AF486806 AY209009 AY792514 AY999702 DQ785106 L15006	-204761	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	-365949	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	473142	+	TSC_hg19_v1_chr2_+_205410560 AX765687 AX765741 AK056157	473246	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	473371	+	AK314985|ICOS|29851|inducible T-cell co-stimulator##AJ277832|ICOS|29851|inducible T-cell co-stimulator##NM_012092|ICOS|29851|inducible T-cell co-stimulator##BC028006|ICOS|29851|inducible T-cell co-stimulator##BC028210|ICOS|29851|inducible T-cell co-stimulator##AB023135|ICOS|29851|inducible T-cell co-stimulator##BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK056157|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)	0.993894	CTCF.p2:-5:0.994
chr5	42992130	42992286	reg1029935.p1	3.937	+	Z11793 BC040075 BC046152 BC058919 AK225801 AL833145 BC005244 BC015875 BC030009 TSC_hg19_v1_chr5_-_42811995 NM_001085486 NM_001093726 NM_005410	-180217	-	AK303469 NM_001134848 AK127368 BC015985 BC039102 TSC_hg19_v1_chr5_+_42756958	-235270	+	BC136496 NM_001242460 NM_001242461 NM_001242462	-426244	+	TSC_hg19_v1_chr5_-_42993436 AK056817	1238	-	AB463523 BC067873 AY032883 NM_001014279	48088	-	AK307963 TSC_hg19_v1_chr5_+_43121018 BC045109	128793	+	Z11793|SEPP1|6414|selenoprotein P, plasma, 1##BC040075|SEPP1|6414|selenoprotein P, plasma, 1##BC046152|SEPP1|6414|selenoprotein P, plasma, 1##BC058919|SEPP1|6414|selenoprotein P, plasma, 1##AK225801|SEPP1|6414|selenoprotein P, plasma, 1##AL833145|SEPP1|6414|selenoprotein P, plasma, 1##BC005244|SEPP1|6414|selenoprotein P, plasma, 1##BC015875|SEPP1|6414|selenoprotein P, plasma, 1##BC030009|SEPP1|6414|selenoprotein P, plasma, 1##NM_001085486|SEPP1|6414|selenoprotein P, plasma, 1##NM_001093726|SEPP1|6414|selenoprotein P, plasma, 1##NM_005410|SEPP1|6414|selenoprotein P, plasma, 1##AK303469|CCDC152|100129792|coiled-coil domain containing 152##NM_001134848|CCDC152|100129792|coiled-coil domain containing 152##AK127368|CCDC152|100129792|coiled-coil domain containing 152##BC015985|CCDC152|100129792|coiled-coil domain containing 152##BC039102|CCDC152|100129792|coiled-coil domain containing 152##BC136496|GHR|2690|growth hormone receptor##NM_001242460|GHR|2690|growth hormone receptor##NM_001242461|GHR|2690|growth hormone receptor##NM_001242462|GHR|2690|growth hormone receptor##AK056817|FLJ32255|643977|uncharacterized LOC643977##BC067873|C5orf39|389289|chromosome 5 open reading frame 39##AY032883|C5orf39|389289|chromosome 5 open reading frame 39##NM_001014279|C5orf39|389289|chromosome 5 open reading frame 39##AK307963|ZNF131|7690|zinc finger protein 131	0.0	
chr5	63503957	63504072	reg1033121.p1	3.937	+	TSC_hg19_v1_chr5_+_63461666 AK090756 AX746601 NM_001113561 NM_178532 BC101277 BC101278 BC101279 AL832580 BC101397	-42333	+	AK314187 TSC_hg19_v1_chr5_-_63258084	-245992	-	AF498978 BC069159 NM_000524 AB464441 BC136263 TSC_hg19_v1_chr5_-_63257719 AK291429 AK311460	-246352	-	BC140707 NM_001029875 BX640900	298467	+	NM_001164442 TSC_hg19_v1_chr5_+_63986235	482171	+	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	560432	-	AK090756|RNF180|285671|ring finger protein 180##NM_001113561|RNF180|285671|ring finger protein 180##NM_178532|RNF180|285671|ring finger protein 180##BC101277|RNF180|285671|ring finger protein 180##BC101278|RNF180|285671|ring finger protein 180##BC101279|RNF180|285671|ring finger protein 180##AL832580|RNF180|285671|ring finger protein 180##BC101397|RNF180|285671|ring finger protein 180##AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AF498978|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC069159|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_000524|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC136263|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK291429|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC140707|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001029875|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##BX640900|RGS7BP|401190|regulator of G-protein signaling 7 binding protein##NM_001164442|FAM159B|100132916|family with sequence similarity 159, member B##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1	0.319296	CTCF.p2:-8:0.319
chr5	87956718	87956796	reg1033793.p1	3.937	+	BC047059 TSC_hg19_v1_chr5_+_87564842	-391908	+	TSC_hg19_v1_chr5_+_87564773 BC030122	-392001	+	BX647345 AK299896 AK300893 AK301091 AY358693 BC037287 NM_153354 AK294520	-392113	-	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	12388	-	TSC_hg19_v1_chr5_-_87980643 AK125167	23950	-	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	162916	-	BC047059|LOC100505894|100505894|uncharacterized LOC100505894##BC030122|LOC100505894|100505894|uncharacterized LOC100505894##BX647345|TMEM161B|153396|transmembrane protein 161B##AK299896|TMEM161B|153396|transmembrane protein 161B##AK300893|TMEM161B|153396|transmembrane protein 161B##AK301091|TMEM161B|153396|transmembrane protein 161B##AY358693|TMEM161B|153396|transmembrane protein 161B##BC037287|TMEM161B|153396|transmembrane protein 161B##NM_153354|TMEM161B|153396|transmembrane protein 161B##AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C	0.0	
chr6	15023739	15023910	reg1030766.p1	3.937	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-905802	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-905919	+	NM_001251901	-906338	+	TSC_hg19_v1_chr6_+_15245702 AK302624	221893	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	222588	+	BC033996 TSC_hg19_v1_chr6_-_15248900	225077	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.0	
chr7	113722254	113722381	reg1012544.p2	3.937	+	X78578 AF024579 HQ258594 BC070313 BC056666 NM_002711 BC126451 BC126453	-163234	-	TSC_hg19_v1_chr7_-_112758613 BC107860	-963688	-	TSC_hg19_v1_chr7_-_112758606 BC065765 BX537645	-963711	-	TSC_hg19_v1_chr7_+_113726381 AK131266	4104	+	TSC_hg19_v1_chr7_+_113726514 AF454830	4186	+	TSC_hg19_v1_chr7_+_113726599 CR749236	4286	+	X78578|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AF024579|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##HQ258594|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC070313|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC056666|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##NM_002711|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126451|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126453|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC107860|LOC401397|401397|uncharacterized LOC401397##BC065765|LOC401397|401397|uncharacterized LOC401397##BX537645|LOC401397|401397|uncharacterized LOC401397##AK131266|FOXP2|93986|forkhead box P2##AF454830|FOXP2|93986|forkhead box P2##CR749236|FOXP2|93986|forkhead box P2	0.0	
chr7	134297070	134297237	reg1036705.p2	3.937	+	NM_001080538	-63305	+	AF524864 NM_020299 BC008837	-84783	+	TSC_hg19_v1_chr7_-_134143878 AK313439 BC000260 NM_001628 AK311339	-153189	-	NM_001724 NM_199186 TSC_hg19_v1_chr7_+_134331586 BC017050 AK315439 AK097778 X04327	34432	+	TSC_hg19_v1_chr7_+_134464170 NM_004342 NM_033138 NM_033157 AK289686	167013	+	TSC_hg19_v1_chr7_+_134464387 AK298524 AK304729 AF247820 M83216	167236	+	NM_001080538|AKR1B15|441282|aldo-keto reductase family 1, member B15##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##AK313439|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC000260|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001628|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK311339|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001724|BPGM|669|2,3-bisphosphoglycerate mutase##NM_199186|BPGM|669|2,3-bisphosphoglycerate mutase##BC017050|BPGM|669|2,3-bisphosphoglycerate mutase##AK315439|BPGM|669|2,3-bisphosphoglycerate mutase##AK097778|BPGM|669|2,3-bisphosphoglycerate mutase##X04327|BPGM|669|2,3-bisphosphoglycerate mutase##NM_004342|CALD1|800|caldesmon 1##NM_033138|CALD1|800|caldesmon 1##NM_033157|CALD1|800|caldesmon 1##AK289686|CALD1|800|caldesmon 1##AK298524|CALD1|800|caldesmon 1##AK304729|CALD1|800|caldesmon 1##AF247820|CALD1|800|caldesmon 1##M83216|CALD1|800|caldesmon 1	0.98128	CTCF.p2:-15:0.981
chr8	21998725	21998801	reg1034447.p2	3.937	+	TSC_hg19_v1_chr8_-_21988524 NM_005144 NM_018411	-10173	-	CU677759 AK026147 TSC_hg19_v1_chr8_-_21966936 BC016902 NM_024815	-31875	-	TSC_hg19_v1_chr8_+_21946730 AK294646	-52016	+	AY562242 CR457353 AK025930 AF218014 AK302352 TSC_hg19_v1_chr8_-_21999400 BC050622 AK025899 AK172846 BC013048 NM_025232	464	-	AF467956 BC142997 TSC_hg19_v1_chr8_-_22014320 BC036494 AJ487961 NM_139278	15540	-	J03553 NM_001172357 NM_001172410 NM_003018 BC105594 AK315742 BC005913 AK298119 J03517 DQ884411	20491	+	NM_005144|HR|55806|hairless homolog (mouse)##NM_018411|HR|55806|hairless homolog (mouse)##AK026147|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##BC016902|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##NM_024815|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##AK294646|FAM160B2|64760|family with sequence similarity 160, member B2##AY562242|REEP4|80346|receptor accessory protein 4##CR457353|REEP4|80346|receptor accessory protein 4##AK025930|REEP4|80346|receptor accessory protein 4##AF218014|REEP4|80346|receptor accessory protein 4##AK302352|REEP4|80346|receptor accessory protein 4##BC050622|REEP4|80346|receptor accessory protein 4##AK025899|REEP4|80346|receptor accessory protein 4##AK172846|REEP4|80346|receptor accessory protein 4##BC013048|REEP4|80346|receptor accessory protein 4##NM_025232|REEP4|80346|receptor accessory protein 4##AF467956|LGI3|203190|leucine-rich repeat LGI family, member 3##BC142997|LGI3|203190|leucine-rich repeat LGI family, member 3##BC036494|LGI3|203190|leucine-rich repeat LGI family, member 3##AJ487961|LGI3|203190|leucine-rich repeat LGI family, member 3##NM_139278|LGI3|203190|leucine-rich repeat LGI family, member 3##J03553|SFTPC|6440|surfactant protein C##NM_001172357|SFTPC|6440|surfactant protein C##NM_001172410|SFTPC|6440|surfactant protein C##NM_003018|SFTPC|6440|surfactant protein C##BC105594|SFTPC|6440|surfactant protein C##AK315742|SFTPC|6440|surfactant protein C##BC005913|SFTPC|6440|surfactant protein C##AK298119|SFTPC|6440|surfactant protein C##J03517|SFTPC|6440|surfactant protein C##DQ884411|SFTPC|6440|surfactant protein C	0.0	
chr10	123456494	123456646	reg1038865.p1	3.936	+	X52832 U11814 M87770 M87772 AB030073 AB030074 AB030075 AB030076 AB030077 AB030078 M80634 M87771 TSC_hg19_v1_chr10_-_123357946 M35718 M97193 BC096749 AK026508 BC039243 NM_000141 NM_001144917 NM_001144918 NM_001144919 NM_022970	-98812	-	AK294026 NM_001144915	-100412	-	AK308621 NM_001144916	-102799	-	TSC_hg19_v1_chr10_-_123687547 AK296356 AF079098 AF079099 AK303604 AK313057 BC022026 NM_001001976 NM_007041	230955	-	TSC_hg19_v1_chr10_-_123687979 AK299101 AK308926	231430	-	TSC_hg19_v1_chr10_-_123734310 AK301658 AK056579	277744	-	X52832|FGFR2|2263|fibroblast growth factor receptor 2##U11814|FGFR2|2263|fibroblast growth factor receptor 2##M87770|FGFR2|2263|fibroblast growth factor receptor 2##M87772|FGFR2|2263|fibroblast growth factor receptor 2##AB030073|FGFR2|2263|fibroblast growth factor receptor 2##AB030074|FGFR2|2263|fibroblast growth factor receptor 2##AB030075|FGFR2|2263|fibroblast growth factor receptor 2##AB030076|FGFR2|2263|fibroblast growth factor receptor 2##AB030077|FGFR2|2263|fibroblast growth factor receptor 2##AB030078|FGFR2|2263|fibroblast growth factor receptor 2##M80634|FGFR2|2263|fibroblast growth factor receptor 2##M87771|FGFR2|2263|fibroblast growth factor receptor 2##M97193|FGFR2|2263|fibroblast growth factor receptor 2##BC096749|FGFR2|2263|fibroblast growth factor receptor 2##AK026508|FGFR2|2263|fibroblast growth factor receptor 2##BC039243|FGFR2|2263|fibroblast growth factor receptor 2##NM_000141|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144917|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144918|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144919|FGFR2|2263|fibroblast growth factor receptor 2##NM_022970|FGFR2|2263|fibroblast growth factor receptor 2##AK294026|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2##AK308621|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144916|FGFR2|2263|fibroblast growth factor receptor 2##AK296356|ATE1|11101|arginyltransferase 1##AF079098|ATE1|11101|arginyltransferase 1##AF079099|ATE1|11101|arginyltransferase 1##AK303604|ATE1|11101|arginyltransferase 1##AK313057|ATE1|11101|arginyltransferase 1##BC022026|ATE1|11101|arginyltransferase 1##NM_001001976|ATE1|11101|arginyltransferase 1##NM_007041|ATE1|11101|arginyltransferase 1##AK299101|ATE1|11101|arginyltransferase 1##AK308926|ATE1|11101|arginyltransferase 1##AK301658|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)##AK056579|NSMCE4A|54780|non-SMC element 4 homolog A (S. cerevisiae)	0.564312	CTCF.p2:8:0.564
chr12	102167673	102167854	reg1003392.p2	3.936	+	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	-34544	-	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	-76141	+	AK296681 NM_002465 NM_206819 NM_206820 NM_206821 AK056587 AK292976 AK295727 AK303401 BC015187 BC030980 BC065720 TSC_hg19_v1_chr12_+_101988748 BC092418 X66276 X73114 AL831993 AL832000 AL832332 AL832350 AL832354 AL832456 BC117217 BC143495 BC143502 BC143503 BC143504 AL834249 BX649073 AB385254 AM392734 EU831907 EU832001	-178967	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	56823	-	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	103355	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	103695	+	AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##AK296681|MYBPC1|4604|myosin binding protein C, slow type##NM_002465|MYBPC1|4604|myosin binding protein C, slow type##NM_206819|MYBPC1|4604|myosin binding protein C, slow type##NM_206820|MYBPC1|4604|myosin binding protein C, slow type##NM_206821|MYBPC1|4604|myosin binding protein C, slow type##AK056587|MYBPC1|4604|myosin binding protein C, slow type##AK292976|MYBPC1|4604|myosin binding protein C, slow type##AK295727|MYBPC1|4604|myosin binding protein C, slow type##AK303401|MYBPC1|4604|myosin binding protein C, slow type##BC015187|MYBPC1|4604|myosin binding protein C, slow type##BC030980|MYBPC1|4604|myosin binding protein C, slow type##BC065720|MYBPC1|4604|myosin binding protein C, slow type##BC092418|MYBPC1|4604|myosin binding protein C, slow type##X66276|MYBPC1|4604|myosin binding protein C, slow type##X73114|MYBPC1|4604|myosin binding protein C, slow type##AL831993|MYBPC1|4604|myosin binding protein C, slow type##AL832000|MYBPC1|4604|myosin binding protein C, slow type##AL832332|MYBPC1|4604|myosin binding protein C, slow type##AL832350|MYBPC1|4604|myosin binding protein C, slow type##AL832354|MYBPC1|4604|myosin binding protein C, slow type##AL832456|MYBPC1|4604|myosin binding protein C, slow type##BC117217|MYBPC1|4604|myosin binding protein C, slow type##BC143495|MYBPC1|4604|myosin binding protein C, slow type##BC143502|MYBPC1|4604|myosin binding protein C, slow type##BC143503|MYBPC1|4604|myosin binding protein C, slow type##BC143504|MYBPC1|4604|myosin binding protein C, slow type##AL834249|MYBPC1|4604|myosin binding protein C, slow type##BX649073|MYBPC1|4604|myosin binding protein C, slow type##AM392734|MYBPC1|4604|myosin binding protein C, slow type##EU831907|MYBPC1|4604|myosin binding protein C, slow type##EU832001|MYBPC1|4604|myosin binding protein C, slow type##AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1	0.0	
chr15	53076179	53076271	reg1026827.p1	3.936	+	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	-105344	-	TSC_hg19_v1_chr15_-_52861344 BC100015 AL833077	-214848	-	TSC_hg19_v1_chr15_-_52861228 AF084555 BC003418 NM_006628	-214993	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	5969	-	AK096055 BX537884 NM_182758	975622	-	NM_001080534	1228875	+	AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##BC100015|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AL833077|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AF084555|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC003418|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##NM_006628|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)	0.728023	
chr16	67906853	67907034	reg1037139.p2	3.936	+	AK056097 NM_025082	-25583	-	TSC_hg19_v1_chr16_+_67880835 NM_005796 X07315 BC002348 AK293739 AK311822	-26134	+	L10378 L10379 TSC_hg19_v1_chr16_+_67876463 DQ892600 DQ895831 CU680258 EF036502	-30461	+	TSC_hg19_v1_chr16_+_67906967 NM_014329 AK128582	2	+	TSC_hg19_v1_chr16_+_67907026 BC043616 BC064567 L26339	83	+	TSC_hg19_v1_chr16_+_67907132 AK291049 AK302563	255	+	AK056097|CENPT|80152|centromere protein T##NM_025082|CENPT|80152|centromere protein T##NM_005796|NUTF2|10204|nuclear transport factor 2##X07315|NUTF2|10204|nuclear transport factor 2##BC002348|NUTF2|10204|nuclear transport factor 2##AK293739|NUTF2|10204|nuclear transport factor 2##AK311822|NUTF2|10204|nuclear transport factor 2##L10378|THAP11|57215|THAP domain containing 11##L10379|THAP11|57215|THAP domain containing 11##DQ892600|THAP11|57215|THAP domain containing 11##DQ895831|THAP11|57215|THAP domain containing 11##EF036502|THAP11|57215|THAP domain containing 11##NM_014329|EDC4|23644|enhancer of mRNA decapping 4##AK128582|EDC4|23644|enhancer of mRNA decapping 4##BC043616|EDC4|23644|enhancer of mRNA decapping 4##BC064567|EDC4|23644|enhancer of mRNA decapping 4##L26339|EDC4|23644|enhancer of mRNA decapping 4##AK291049|EDC4|23644|enhancer of mRNA decapping 4##AK302563|EDC4|23644|enhancer of mRNA decapping 4	0.0	
chr18	43267140	43267321	reg1030175.p2	3.936	+	AF349446 NM_007163	-72465	+	NM_001242692 AK292422	-474278	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-1006362	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	36874	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	36927	+	NM_001146037	39687	+	AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146037|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.0	
chr2	130643469	130643556	reg1034554.p1	3.936	+	AK304326 BC096239 BC096240 BC099638 BC099639 NM_004807 AB006179 TSC_hg19_v1_chr2_-_129076443	-1567212	-	AK074376 TSC_hg19_v1_chr2_+_128928049	-1715465	+	TSC_hg19_v1_chr2_+_128848891 AF227905	-1794651	+	NM_032144 AL136727	93723	+	EF523384 NM_001099771 TSC_hg19_v1_chr2_-_130886919	243346	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	259099	-	BC096239|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC096240|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099638|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##BC099639|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##NM_004807|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AB006179|HS6ST1|9394|heparan sulfate 6-O-sulfotransferase 1##AK074376|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##AF227905|UGGT1|56886|UDP-glucose glycoprotein glucosyltransferase 1##NM_032144|RAB6C|84084|RAB6C, member RAS oncogene family##AL136727|RAB6C|84084|RAB6C, member RAS oncogene family##EF523384|POTEF|728378|POTE ankyrin domain family, member F##NM_001099771|POTEF|728378|POTE ankyrin domain family, member F##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B	0.212064	CTCF.p2:12:0.212
chr2	69435301	69435409	reg1032125.p1	3.936	+	TSC_hg19_v1_chr2_+_69240310 NM_018153 NM_032208 NM_053034 AF279145 AK001463 AY928974 AY928975 AY928976 AY928977 AK223273 BC012074 AK309553 AF421380 AK292113 CU680200 EU832615 EU832687	-194972	+	AB039886 AJ966789 NM_019617 AB590637 AY139184 AK098489 AY456961 BC059778 AY359050	-233613	+	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	-255299	-	TSC_hg19_v1_chr2_-_69614353 M90516 BC045641 NM_001244710 NM_002056	179050	-	AJ132584 AF132967 AB528729 HQ258750 TSC_hg19_v1_chr2_-_69664568 AK300700 AK308567	229218	-	TSC_hg19_v1_chr2_-_69664606 AY286306 AY286307 BX538347	229259	-	NM_018153|ANTXR1|84168|anthrax toxin receptor 1##NM_032208|ANTXR1|84168|anthrax toxin receptor 1##NM_053034|ANTXR1|84168|anthrax toxin receptor 1##AF279145|ANTXR1|84168|anthrax toxin receptor 1##AK001463|ANTXR1|84168|anthrax toxin receptor 1##AK223273|ANTXR1|84168|anthrax toxin receptor 1##BC012074|ANTXR1|84168|anthrax toxin receptor 1##AK309553|ANTXR1|84168|anthrax toxin receptor 1##AF421380|ANTXR1|84168|anthrax toxin receptor 1##AK292113|ANTXR1|84168|anthrax toxin receptor 1##EU832615|ANTXR1|84168|anthrax toxin receptor 1##EU832687|ANTXR1|84168|anthrax toxin receptor 1##AB039886|GKN1|56287|gastrokine 1##AJ966789|GKN1|56287|gastrokine 1##NM_019617|GKN1|56287|gastrokine 1##AY139184|GKN1|56287|gastrokine 1##AK098489|GKN1|56287|gastrokine 1##AY456961|GKN1|56287|gastrokine 1##BC059778|GKN1|56287|gastrokine 1##AY359050|GKN1|56287|gastrokine 1##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2##M90516|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##BC045641|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_001244710|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_002056|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##AJ132584|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AF132967|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##HQ258750|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK300700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK308567|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286306|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286307|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BX538347|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	0.273818	CTCF.p2:0:0.274
chr5	67512407	67512560	reg1028142.p1	3.936	+	TSC_hg19_v1_chr5_+_67511602 BC094795	-876	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	-903	+	BC109069 BC109070 D83597 NM_005582 AK313177	-1019883	-	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	71811	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	74063	+	AK094785 NM_001242466 AK294919	75969	+	BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.0	
chr10	106584287	106584414	reg1036597.p1	3.935	+	BC117417 TSC_hg19_v1_chr10_+_106401047	-183305	+	AB028982 NM_014978	-183492	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-470809	+	TSC_hg19_v1_chr10_-_108459000 AK123752	1874709	-	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	2340026	-	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	5098859	-	BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble	0.0	
chr1	12128104	12128182	reg1038864.p1	3.935	+	M83554 NM_001243 BC136400 BC171762 S75768	-4599	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-48573	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-48609	+	D86042 BC063482 NM_152942 BC073839 BC141804	57873	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	98918	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	98968	+	M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr12	32012659	32012811	reg1031705.p2	3.935	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	-67531	-	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	-130679	-	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	-130761	-	TSC_hg19_v1_chr12_+_32112348 NM_018169	99596	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	99659	+	TSC_hg19_v1_chr12_+_32259750 BC010091	246979	+	BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)	0.0	
chr15	75079853	75080034	reg1028547.p1	3.935	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	-5087	+	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	-5518	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-38751	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	25229	+	AK024055 NM_001030005 AB072900 BC018026 AY286501	39047	+	TSC_hg19_v1_chr15_-_75135477 AB528889 CU691158 AK075047 BC056423 AK299380	55510	-	X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like##AK024055|CPLX3|594855|complexin 3##NM_001030005|CPLX3|594855|complexin 3##AB072900|CPLX3|594855|complexin 3##BC018026|CPLX3|594855|complexin 3##AY286501|CPLX3|594855|complexin 3##AK075047|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC056423|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK299380|ULK3|25989|unc-51-like kinase 3 (C. elegans)	0.0	
chr15	81444871	81444961	reg1037341.p1	3.935	+	AK302120 BC062471 NM_173528 AK307565	-18289	+	TSC_hg19_v1_chr15_+_81293344 NM_022566	-151572	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	-162716	-	AK124725 NM_001172128 AK124565 AK131530	44302	+	NM_172217 AY324389	72773	+	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	144388	+	AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26##NM_022566|MESDC1|59274|mesoderm development candidate 1##D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##AK124725|IL16|3603|interleukin 16##NM_001172128|IL16|3603|interleukin 16##AK124565|IL16|3603|interleukin 16##AK131530|IL16|3603|interleukin 16##NM_172217|IL16|3603|interleukin 16##AY324389|IL16|3603|interleukin 16##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16	0.0	
chr16	16127392	16127505	reg1034670.p2	3.935	+	TSC_hg19_v1_chr16_+_16043442 L05628 NM_004996 NM_019862 NM_019898 NM_019899 NM_019900 X78338	-84084	+	AL832498 TSC_hg19_v1_chr16_-_15982471	-144963	-	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	-144995	-	TSC_hg19_v1_chr16_+_16146613 HQ917065	19170	+	AF168791 AM711638 AM774324 BC050733 AF076622 BC131732 U66689 NM_001079528 NM_001171 AY078405 AK298295	189872	-	TSC_hg19_v1_chr16_+_16326401 NM_001004067	198949	+	L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##AL832498|FOPNL|123811|FGFR1OP N-terminal like##AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##AF168791|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM711638|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM774324|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC050733|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AF076622|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC131732|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001079528|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001171|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AY078405|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AK298295|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001004067|NOMO3|408050|NODAL modulator 3	0.090387	
chr16	31008380	31008561	reg1034659.p2	3.935	+	TSC_hg19_v1_chr16_+_30996538 NM_001142777 NM_001142778 NM_025193 AK057436 BC004929 AK290950 AK292068	-11941	+	TSC_hg19_v1_chr16_+_30969464 BC108673	-38933	+	AB002337 NM_014712	-39856	+	AB527655 AY995211 BC062298 AY028792 NM_052874 TSC_hg19_v1_chr16_-_31021950	13379	-	TSC_hg19_v1_chr16_+_31044415 AK091833 AX747209	35946	+	TSC_hg19_v1_chr16_+_31044856 AK315716	36385	+	NM_001142777|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##NM_001142778|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##NM_025193|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##AK057436|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##BC004929|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##AK290950|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##AK292068|HSD3B7|80270|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7##AB002337|SETD1A|9739|SET domain containing 1A##NM_014712|SETD1A|9739|SET domain containing 1A##AY995211|STX1B|112755|syntaxin 1B##BC062298|STX1B|112755|syntaxin 1B##AY028792|STX1B|112755|syntaxin 1B##NM_052874|STX1B|112755|syntaxin 1B##AK091833|STX4|6810|syntaxin 4##AK315716|STX4|6810|syntaxin 4	0.0	
chr16	73049983	73050163	reg1031365.p1	3.935	+	TSC_hg19_v1_chr16_-_72991733 BC029653	-58368	-	TSC_hg19_v1_chr16_+_72699031 AK021563	-351009	+	AK122925 NM_001160213	-843725	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	32148	-	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	42513	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	1280620	+	BC029653|ZFHX3|463|zinc finger homeobox 3##AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.0	
chr17	66288651	66288809	reg1034515.p2	3.935	+	AX750577 AX750581 U79745 AK313121 AK290417 BC064832 NM_001174166 NM_004694	-1400	-	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	-33396	+	TSC_hg19_v1_chr17_+_66244233 AF208856	-44487	+	AY691424 CU691786 TSC_hg19_v1_chr17_-_66453638 BC039867 AK301830 AK000917 NM_017983	164881	-	TSC_hg19_v1_chr17_+_66508140 NM_212471 Y07642	219393	+	TSC_hg19_v1_chr17_+_66508161 BC093042	219436	+	AX750581|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G##AY691424|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##BC039867|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK301830|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK000917|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_017983|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_212471|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##Y07642|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC093042|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	0.0	
chr17	80250545	80250673	reg1033398.p1	3.935	+	TSC_hg19_v1_chr17_-_80231580 BC003558 BC015775 AK291758 AK295638 AK303365 NM_001893 NM_139062	-19029	-	TSC_hg19_v1_chr17_-_80231315 AB091044 AK296969	-19316	-	TSC_hg19_v1_chr17_-_80231267 AB209463 CU677441 CU678502 EU832350 EU832435 AB527595	-19356	-	BT006696 DQ890740 DQ892590 DQ893911 DQ895810 AK298096 AK310061 BC009293 BC013297 X06180 AK223465 AY935534 AY935535 AY935536 AY935537 AK310558 NM_006137	24815	-	TSC_hg19_v1_chr17_-_80291610 AK223068 BC017716	41004	-	AK312980 U77643 TSC_hg19_v1_chr17_-_80291643 AK223104	41037	-	BC003558|CSNK1D|1453|casein kinase 1, delta##BC015775|CSNK1D|1453|casein kinase 1, delta##AK291758|CSNK1D|1453|casein kinase 1, delta##AK295638|CSNK1D|1453|casein kinase 1, delta##AK303365|CSNK1D|1453|casein kinase 1, delta##NM_001893|CSNK1D|1453|casein kinase 1, delta##NM_139062|CSNK1D|1453|casein kinase 1, delta##AB091044|CSNK1D|1453|casein kinase 1, delta##AK296969|CSNK1D|1453|casein kinase 1, delta##AB209463|CSNK1D|1453|casein kinase 1, delta##EU832350|CSNK1D|1453|casein kinase 1, delta##EU832435|CSNK1D|1453|casein kinase 1, delta##BT006696|CD7|924|CD7 molecule##DQ890740|CD7|924|CD7 molecule##DQ892590|CD7|924|CD7 molecule##DQ893911|CD7|924|CD7 molecule##DQ895810|CD7|924|CD7 molecule##AK298096|CD7|924|CD7 molecule##AK310061|CD7|924|CD7 molecule##BC009293|CD7|924|CD7 molecule##BC013297|CD7|924|CD7 molecule##X06180|CD7|924|CD7 molecule##AK223465|CD7|924|CD7 molecule##AY935534|CD7|924|CD7 molecule##AY935535|CD7|924|CD7 molecule##AY935536|CD7|924|CD7 molecule##AY935537|CD7|924|CD7 molecule##AK310558|CD7|924|CD7 molecule##NM_006137|CD7|924|CD7 molecule##AK223068|SECTM1|6398|secreted and transmembrane 1##BC017716|SECTM1|6398|secreted and transmembrane 1##AK312980|SECTM1|6398|secreted and transmembrane 1##U77643|SECTM1|6398|secreted and transmembrane 1##AK223104|SECTM1|6398|secreted and transmembrane 1	0.0	
chr2	79462407	79462522	reg1039804.p1	3.935	+	AK291973 AK311523 AK311523 AK311526 NM_138938 NM_002580 NM_138937	-75586	-	TSC_hg19_v1_chr2_+_79347612 AK291981 AK311087 M18963	-114844	+	AK307292 NM_002909 TSC_hg19_v1_chr2_+_79347583	-114928	+	NM_001164883 NM_004389 BC052996 TSC_hg19_v1_chr2_+_79740147 BC040458	277644	+	TSC_hg19_v1_chr2_+_79740175 AK295181	277751	+	AB587576 AY182024 HQ257885 TSC_hg19_v1_chr2_-_80530981	1068499	-	AK291973|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311523|REG3A|5068|regenerating islet-derived 3 alpha##AK311526|REG3A|5068|regenerating islet-derived 3 alpha##NM_138938|REG3A|5068|regenerating islet-derived 3 alpha##NM_002580|REG3A|5068|regenerating islet-derived 3 alpha##NM_138937|REG3A|5068|regenerating islet-derived 3 alpha##AK291981|REG1A|5967|regenerating islet-derived 1 alpha##M18963|REG1A|5967|regenerating islet-derived 1 alpha##AK307292|REG1A|5967|regenerating islet-derived 1 alpha##NM_002909|REG1A|5967|regenerating islet-derived 1 alpha##NM_001164883|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##NM_004389|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC052996|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##BC040458|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##AK295181|CTNNA2|1496|catenin (cadherin-associated protein), alpha 2##AY182024|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##HQ257885|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1	0.080629	
chr6_mann_hap4	4673502	4673587	reg1030295.p1	3.935	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.960769	CTCF.p2:8:0.961
chr10	120880154	120880305	reg1032177.p2	3.934	+	TSC_hg19_v1_chr10_+_120863628 AF168713 AK000031 AK297633 AK297971 AK293136 BC022271 CU687018 CU692524	-16589	+	NM_207009 TSC_hg19_v1_chr10_+_120863621	-16612	+	TSC_hg19_v1_chr10_+_120863593 AK293365	-16649	+	CU687762 AY269785 TSC_hg19_v1_chr10_-_120925213 AK095295 BC063562 BC050475 NM_213649	44958	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	58074	-	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	58118	-	AF168713|FAM45A|404636|family with sequence similarity 45, member A##AK000031|FAM45A|404636|family with sequence similarity 45, member A##AK297633|FAM45A|404636|family with sequence similarity 45, member A##AK297971|FAM45B|55855|family with sequence similarity 45, member A pseudogene##AK293136|FAM45A|404636|family with sequence similarity 45, member A##BC022271|FAM45A|404636|family with sequence similarity 45, member A##NM_207009|FAM45A|404636|family with sequence similarity 45, member A##AK293365|FAM45A|404636|family with sequence similarity 45, member A##AY269785|SFXN4|119559|sideroflexin 4##AK095295|SFXN4|119559|sideroflexin 4##BC063562|SFXN4|119559|sideroflexin 4##BC050475|SFXN4|119559|sideroflexin 4##NM_213649|SFXN4|119559|sideroflexin 4##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3	0.0	
chr10	3894588	3894739	reg1029864.p1	3.934	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-67154	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-67352	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-679658	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	973755	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1110851	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1110960	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr1	10010725	10010855	reg1013438.p2	3.934	+	TSC_hg19_v1_chr1_+_10003532 AK315640	-7247	+	NM_022787 BC014943 TSC_hg19_v1_chr1_+_10003497 AK026065 AK222920	-7294	+	TSC_hg19_v1_chr1_-_10003358 AB060688 BC007240 AK304348 AK312550	-7417	-	BC063013 NM_052960 BC033883 AF399927 AK312027 AY145438 CU687628	46494	+	TSC_hg19_v1_chr1_+_10093015 AB028839 NM_001105562 NM_006048	82225	+	AB014584 TSC_hg19_v1_chr1_+_10093218	82423	+	AK315640|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##NM_022787|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##BC014943|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK026065|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK222920|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AB060688|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##BC007240|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK304348|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK312550|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##BC063013|RBP7|116362|retinol binding protein 7, cellular##NM_052960|RBP7|116362|retinol binding protein 7, cellular##BC033883|RBP7|116362|retinol binding protein 7, cellular##AF399927|RBP7|116362|retinol binding protein 7, cellular##AK312027|RBP7|116362|retinol binding protein 7, cellular##AY145438|RBP7|116362|retinol binding protein 7, cellular##AB028839|UBE4B|10277|ubiquitination factor E4B##NM_001105562|UBE4B|10277|ubiquitination factor E4B##NM_006048|UBE4B|10277|ubiquitination factor E4B##AB014584|UBE4B|10277|ubiquitination factor E4B	0.0	
chr12	15679053	15679174	reg1032350.p1	3.934	+	AK289784 TSC_hg19_v1_chr12_+_15475476 BC035960 U20489 BC126201 BC126203 Z48541 CU690232	-203562	+	NM_002848 NM_030667 TSC_hg19_v1_chr12_+_15475264 AB209729	-203853	+	AK311016 BC007997 AK295343 AK313881 NM_001190726 NM_032918	-304763	-	NM_030668 NM_030669 NM_030670 NM_030671 AF152378 AF187042 AF187043 AF187044	20168	+	TSC_hg19_v1_chr12_+_15699551 AK290982	20464	+	TSC_hg19_v1_chr12_-_15815073 AK316134	136027	-	AK289784|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC035960|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##U20489|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126201|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##BC126203|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##Z48541|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_002848|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030667|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AB209729|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK311016|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##BC007997|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK295343|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##AK313881|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_001190726|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_032918|RERG|85004|RAS-like, estrogen-regulated, growth inhibitor##NM_030668|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030669|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030670|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##NM_030671|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF152378|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187042|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187043|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AF187044|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK290982|PTPRO|5800|protein tyrosine phosphatase, receptor type, O##AK316134|EPS8|2059|epidermal growth factor receptor pathway substrate 8	0.0	
chr16	11349965	11350069	reg1011294.p7	3.934	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-311574	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-313782	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-313851	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	33	-	X63758 BC096135 BC096136 BC096137 NM_005425	13121	-	NM_021247	17434	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr16	2557262	2557352	reg1032952.p2	3.934	+	TSC_hg19_v1_chr16_+_2525149 BC112389 NM_001199107 NM_020705 AB032997	-32176	+	NM_006181 U86759	-35808	+	AK128408 TSC_hg19_v1_chr16_+_2510099 NM_025108 AK093788 AK301929 AX748307 BC018719 AK023971	-47195	+	TSC_hg19_v1_chr16_+_2563709 NM_001198569 M62762 NM_001694	6477	+	TSC_hg19_v1_chr16_+_2563952 BC009290	6638	+	TSC_hg19_v1_chr16_+_2563977 BC007389 BC004537	6674	+	BC112389|TBC1D24|57465|TBC1 domain family, member 24##NM_001199107|TBC1D24|57465|TBC1 domain family, member 24##NM_020705|TBC1D24|57465|TBC1 domain family, member 24##AB032997|TBC1D24|57465|TBC1 domain family, member 24##NM_006181|NTN3|4917|netrin 3##U86759|NTN3|4917|netrin 3##AK128408|C16orf59|80178|chromosome 16 open reading frame 59##NM_025108|C16orf59|80178|chromosome 16 open reading frame 59##AK093788|C16orf59|80178|chromosome 16 open reading frame 59##AK301929|C16orf59|80178|chromosome 16 open reading frame 59##BC018719|C16orf59|80178|chromosome 16 open reading frame 59##AK023971|C16orf59|80178|chromosome 16 open reading frame 59##NM_001198569|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##M62762|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##NM_001694|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##BC009290|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##BC007389|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##BC004537|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	0.0	
chr1	86965810	86965924	reg1033227.p2	3.934	+	NM_001285 TSC_hg19_v1_chr1_+_86934607 AK314375 AK291999 AK097057 AF127036	-31280	+	NM_006536 AF043977 AK296719 AK290348 AK307937 BC041096 AB026833 AF127980	-76018	+	BC091490 TSC_hg19_v1_chr1_-_86862004 AB033055 BC047368 BC009779 BC012579 AK308351 AK302792 BC026105 AK303209 NM_001007022 NM_001184765 NM_001184766 NM_020729	-103892	-	NM_012128 AK000072 AK314430 BC113687 BC113689 AF127035 AY358470 HQ258531 AK307785 AK307898 AK293766	46974	+	TSC_hg19_v1_chr1_+_87170254 NM_001206651 NM_001206652 NM_001206653 NM_016009	204384	+	TSC_hg19_v1_chr1_+_87170289 AK303710 AB007960 AK225864 AK001954	204511	+	NM_001285|CLCA1|1179|chloride channel accessory 1##AK314375|CLCA1|1179|chloride channel accessory 1##AK291999|CLCA1|1179|chloride channel accessory 1##AK097057|CLCA1|1179|chloride channel accessory 1##AF127036|CLCA1|1179|chloride channel accessory 1##NM_006536|CLCA2|9635|chloride channel accessory 2##AF043977|CLCA2|9635|chloride channel accessory 2##AK290348|CLCA2|9635|chloride channel accessory 2##AK307937|CLCA2|9635|chloride channel accessory 2##BC041096|CLCA2|9635|chloride channel accessory 2##AB026833|CLCA2|9635|chloride channel accessory 2##AF127980|CLCA2|9635|chloride channel accessory 2##BC091490|ODF2L|57489|outer dense fiber of sperm tails 2-like##AB033055|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC047368|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC009779|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC012579|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK308351|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK302792|ODF2L|57489|outer dense fiber of sperm tails 2-like##BC026105|ODF2L|57489|outer dense fiber of sperm tails 2-like##AK303209|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001007022|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184765|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_001184766|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_020729|ODF2L|57489|outer dense fiber of sperm tails 2-like##NM_012128|CLCA4|22802|chloride channel accessory 4##AK000072|CLCA4|22802|chloride channel accessory 4##AK314430|CLCA4|22802|chloride channel accessory 4##BC113687|CLCA4|22802|chloride channel accessory 4##BC113689|CLCA4|22802|chloride channel accessory 4##AF127035|CLCA4|22802|chloride channel accessory 4##AY358470|CLCA4|22802|chloride channel accessory 4##HQ258531|CLCA4|22802|chloride channel accessory 4##AK307785|CLCA4|22802|chloride channel accessory 4##AK307898|CLCA4|22802|chloride channel accessory 4##AK293766|CLCA4|22802|chloride channel accessory 4##NM_001206651|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_001206652|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_001206653|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK303710|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AB007960|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK225864|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK001954|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	2.658503	CTCF.p2:4:0.807	CTCF.p2:41:0.926	CTCF.p2:-48:0.926
chr21	43925334	43925482	reg1037129.p1	3.934	+	AJ269529 NM_018964	-5667	+	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	-9028	-	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-101396	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	8595	+	TSC_hg19_v1_chr21_+_44073730 NM_001001567 NM_001001568 NM_001001569 NM_001001570 NM_001001571 NM_001001572 NM_001001573 NM_001001574 NM_001001575 NM_001001576 NM_001001577 NM_001001578 NM_001001579 NM_001001580 NM_001001581 NM_001001582 NM_001001583 NM_001001584 NM_001001585 NM_002606 AF048837 AY701187 BC009047 AK314679 AY196299 AY196300 AY196301 AY196302 AY196303 AY196304 AY196305 AY196306 AY196307 AY196308 AY196309 AY196310 AY196311 AY196312 AY196313 AY196314 AK001307 AK294112 AF067223 AF067224 AF067225 AF067226 AB527758 AY242121 BT007016 GQ129331 GQ129332	148379	+	AB590172 CU675357 DQ892967 DQ896215 TSC_hg19_v1_chr21_-_44299643 AK292923 AK315008 AJ243912 AJ243913 BC006341	374216	-	AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_001001567|PDE9A|5152|phosphodiesterase 9A##NM_001001568|PDE9A|5152|phosphodiesterase 9A##NM_001001569|PDE9A|5152|phosphodiesterase 9A##NM_001001570|PDE9A|5152|phosphodiesterase 9A##NM_001001571|PDE9A|5152|phosphodiesterase 9A##NM_001001572|PDE9A|5152|phosphodiesterase 9A##NM_001001573|PDE9A|5152|phosphodiesterase 9A##NM_001001574|PDE9A|5152|phosphodiesterase 9A##NM_001001575|PDE9A|5152|phosphodiesterase 9A##NM_001001576|PDE9A|5152|phosphodiesterase 9A##NM_001001577|PDE9A|5152|phosphodiesterase 9A##NM_001001578|PDE9A|5152|phosphodiesterase 9A##NM_001001579|PDE9A|5152|phosphodiesterase 9A##NM_001001580|PDE9A|5152|phosphodiesterase 9A##NM_001001581|PDE9A|5152|phosphodiesterase 9A##NM_001001582|PDE9A|5152|phosphodiesterase 9A##NM_001001583|PDE9A|5152|phosphodiesterase 9A##NM_001001584|PDE9A|5152|phosphodiesterase 9A##NM_001001585|PDE9A|5152|phosphodiesterase 9A##NM_002606|PDE9A|5152|phosphodiesterase 9A##AF048837|PDE9A|5152|phosphodiesterase 9A##AY701187|PDE9A|5152|phosphodiesterase 9A##BC009047|PDE9A|5152|phosphodiesterase 9A##AK314679|PDE9A|5152|phosphodiesterase 9A##AY196299|PDE9A|5152|phosphodiesterase 9A##AY196300|PDE9A|5152|phosphodiesterase 9A##AY196301|PDE9A|5152|phosphodiesterase 9A##AY196302|PDE9A|5152|phosphodiesterase 9A##AY196303|PDE9A|5152|phosphodiesterase 9A##AY196304|PDE9A|5152|phosphodiesterase 9A##AY196305|PDE9A|5152|phosphodiesterase 9A##AY196306|PDE9A|5152|phosphodiesterase 9A##AY196307|PDE9A|5152|phosphodiesterase 9A##AY196308|PDE9A|5152|phosphodiesterase 9A##AY196309|PDE9A|5152|phosphodiesterase 9A##AY196310|PDE9A|5152|phosphodiesterase 9A##AY196311|PDE9A|5152|phosphodiesterase 9A##AY196312|PDE9A|5152|phosphodiesterase 9A##AY196313|PDE9A|5152|phosphodiesterase 9A##AY196314|PDE9A|5152|phosphodiesterase 9A##AK001307|PDE9A|5152|phosphodiesterase 9A##AK294112|PDE9A|5152|phosphodiesterase 9A##AF067223|PDE9A|5152|phosphodiesterase 9A##AF067224|PDE9A|5152|phosphodiesterase 9A##AF067225|PDE9A|5152|phosphodiesterase 9A##AF067226|PDE9A|5152|phosphodiesterase 9A##AY242121|PDE9A|5152|phosphodiesterase 9A##BT007016|PDE9A|5152|phosphodiesterase 9A##GQ129331|PDE9A|5152|phosphodiesterase 9A##GQ129332|PDE9A|5152|phosphodiesterase 9A##DQ892967|WDR4|10785|WD repeat domain 4##DQ896215|WDR4|10785|WD repeat domain 4##AK292923|WDR4|10785|WD repeat domain 4##AK315008|WDR4|10785|WD repeat domain 4##AJ243912|WDR4|10785|WD repeat domain 4##AJ243913|WDR4|10785|WD repeat domain 4##BC006341|WDR4|10785|WD repeat domain 4	0.0	
chr22	42770820	42770946	reg1037304.p1	3.934	+	BC038245 TSC_hg19_v1_chr22_-_42765218	-5681	-	AB527391 NM_005650 NM_181492	-159506	-	AK308211 TSC_hg19_v1_chr22_-_42526882 AK309600 NM_000106 NM_001025161	-244002	-	AB463140 CU013214 CU013502 TSC_hg19_v1_chr22_-_42828365 AY247409 BC038241 AY121370 CT841509 NM_145912	57498	-	BC031838 TSC_hg19_v1_chr22_-_42915796 BC041639 BC042335 AB527998 AK314650	144884	-	TSC_hg19_v1_chr22_-_42915803 BC073834 BC064560 BC035992 BC121118 BC121119 NM_015703	144931	-	NM_005650|TCF20|6942|transcription factor 20 (AR1)##NM_181492|TCF20|6942|transcription factor 20 (AR1)##AK308211|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##AK309600|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_000106|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##NM_001025161|CYP2D6|1565|cytochrome P450, family 2, subfamily D, polypeptide 6##CU013214|NFAM1|150372|NFAT activating protein with ITAM motif 1##CU013502|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY247409|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC038241|NFAM1|150372|NFAT activating protein with ITAM motif 1##AY121370|NFAM1|150372|NFAT activating protein with ITAM motif 1##CT841509|NFAM1|150372|NFAT activating protein with ITAM motif 1##NM_145912|NFAM1|150372|NFAT activating protein with ITAM motif 1##BC031838|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC041639|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC042335|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##AK314650|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC073834|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC064560|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC035992|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121118|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##BC121119|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)##NM_015703|RRP7A|27341|ribosomal RNA processing 7 homolog A (S. cerevisiae)	0.0	
chr2	64750200	64750300	reg1007846.p2	3.934	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	-68602	+	TSC_hg19_v1_chr2_+_64681295 NM_014181	-68950	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-378726	-	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	1234	+	TSC_hg19_v1_chr2_+_64751580 AL833962	1352	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	130599	-	BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##AL833962|AFTPH|54812|aftiphilin##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2	0.0	
chr3	101546698	101546781	reg1030861.p1	3.934	+	AK289689 NM_001134456	-48454	+	TSC_hg19_v1_chr3_+_101498080 BC009431	-48651	+	NM_145037 TSC_hg19_v1_chr3_+_101498054	-48691	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	221	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	21635	+	AY090780 NM_175056 BC143817	607128	+	AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##BC009431|FAM55C|91775|family with sequence similarity 55, member C##NM_145037|FAM55C|91775|family with sequence similarity 55, member C##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1	0.0	
chr8	101484992	101485092	reg1023858.p2	3.934	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-162757	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-162861	-	AB271913 AB271914 AB029316 NM_015435	-169571	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	86898	-	AK093906 AX748361 NM_152628	176850	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	248764	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr9	38182417	38182492	reg1041568.p2	3.934	+	X75342 NM_003028 TSC_hg19_v1_chr9_-_38069225 BC094765	-113213	-	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	-113313	-	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	-278088	-	TSC_hg19_v1_chr9_+_38392669 NM_000692	210219	+	TSC_hg19_v1_chr9_+_38392698 AK313344	210243	+	TSC_hg19_v1_chr9_+_38392760 AK297020 BC001619 AK225950	210288	+	X75342|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_003028|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B##AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK313344|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK297020|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##BC001619|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK225950|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1	0.0	
chrX	131121392	131121544	reg1031495.p1	3.934	+	TSC_hg19_v1_chrX_-_130964633 AK097911	-156817	-	BC137050 AB529233 NM_001004486	-443470	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-698056	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	35853	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	36172	+	FJ717411 BC114371 AK125336 NM_194277	140492	-	AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4##FJ717411|FRMD7|90167|FERM domain containing 7##BC114371|FRMD7|90167|FERM domain containing 7##AK125336|FRMD7|90167|FERM domain containing 7##NM_194277|FRMD7|90167|FERM domain containing 7	0.0	
chr10	112174629	112174718	reg1029909.p2	3.933	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-109973	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-110080	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-188852	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	83078	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	152819	+	AF067163 TSC_hg19_v1_chr10_+_112344155	169442	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.013805	
chr10	81251038	81251183	reg1033549.p1	3.933	+	TSC_hg19_v1_chr10_-_81205381 AK308876 AK075279 BC053564 BC039249 BC028617 NM_153367	-45850	-	TSC_hg19_v1_chr10_+_81107279 AB529152 CU678858 EU831447	-143823	+	BC013204 BC110299 TSC_hg19_v1_chr10_+_81107252	-143861	+	BC070048 NM_001099692	21246	+	BC111571 K03475 BC157866 BC157890 BC171875 S69685 S69686 AK225599 AK298041 AK298074 AK298114 AK313179 AK316192 HQ021421 HQ021422 HQ021423 HQ021424 HQ021425 HQ021426 HQ021427 HQ021428 HQ021429 HQ021430 HQ021431 HQ021432 NM_001098668 S69680 S69681 S69683 S69791	69041	-	AK290703 AK298002 AK298029 AK298034 NM_001093770 NM_001164644 NM_001164645 NM_001164646 NM_001164647 NM_005411 S69686 AK316196 HQ021433 HQ021434 HQ021435 HQ021436 HQ021437 HQ021438 HQ021439 HQ021440 HQ021441 HQ021442 S69680 S69681 AK298092 AK309518 S69685 S69687 S69688 S69690 BC026229 M13686 BC111570	119594	+	AK308876|ZCCHC24|219654|zinc finger, CCHC domain containing 24##AK075279|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC053564|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC039249|ZCCHC24|219654|zinc finger, CCHC domain containing 24##BC028617|ZCCHC24|219654|zinc finger, CCHC domain containing 24##NM_153367|ZCCHC24|219654|zinc finger, CCHC domain containing 24##EU831447|PPIF|10105|peptidylprolyl isomerase F##BC013204|PPIF|10105|peptidylprolyl isomerase F##BC110299|PPIF|10105|peptidylprolyl isomerase F##BC070048|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##NM_001099692|EIF5AL1|143244|eukaryotic translation initiation factor 5A-like 1##BC111571|SFTPA2|729238|surfactant protein A2##K03475|SFTPA2|729238|surfactant protein A2##BC157866|SFTPA2|729238|surfactant protein A2##BC157890|SFTPA2|729238|surfactant protein A2##BC171875|SFTPA1|653509|surfactant protein A1##AK225599|SFTPA2|729238|surfactant protein A2##AK298041|SFTPA2|729238|surfactant protein A2##AK298074|SFTPA2|729238|surfactant protein A2##AK298114|SFTPA2|729238|surfactant protein A2##AK313179|SFTPA2|729238|surfactant protein A2##AK316192|SFTPA2|729238|surfactant protein A2##HQ021421|SFTPA2|729238|surfactant protein A2##HQ021422|SFTPA2|729238|surfactant protein A2##HQ021423|SFTPA2|729238|surfactant protein A2##HQ021424|SFTPA2|729238|surfactant protein A2##HQ021425|SFTPA2|729238|surfactant protein A2##HQ021426|SFTPA2|729238|surfactant protein A2##HQ021427|SFTPA2|729238|surfactant protein A2##HQ021428|SFTPA2|729238|surfactant protein A2##HQ021429|SFTPA2|729238|surfactant protein A2##HQ021430|SFTPA2|729238|surfactant protein A2##HQ021431|SFTPA2|729238|surfactant protein A2##HQ021432|SFTPA2|729238|surfactant protein A2##NM_001098668|SFTPA2|729238|surfactant protein A2##AK290703|SFTPA1|653509|surfactant protein A1##AK298002|SFTPA1|653509|surfactant protein A1##AK298029|SFTPA1|653509|surfactant protein A1##AK298034|SFTPA1|653509|surfactant protein A1##NM_001093770|SFTPA1|653509|surfactant protein A1##NM_001164644|SFTPA1|653509|surfactant protein A1##NM_001164645|SFTPA1|653509|surfactant protein A1##NM_001164646|SFTPA1|653509|surfactant protein A1##NM_001164647|SFTPA1|653509|surfactant protein A1##NM_005411|SFTPA1|653509|surfactant protein A1##AK316196|SFTPA1|653509|surfactant protein A1##HQ021433|SFTPA1|653509|surfactant protein A1##HQ021434|SFTPA1|653509|surfactant protein A1##HQ021435|SFTPA1|653509|surfactant protein A1##HQ021436|SFTPA1|653509|surfactant protein A1##HQ021437|SFTPA1|653509|surfactant protein A1##HQ021438|SFTPA1|653509|surfactant protein A1##HQ021439|SFTPA1|653509|surfactant protein A1##HQ021440|SFTPA1|653509|surfactant protein A1##HQ021441|SFTPA1|653509|surfactant protein A1##HQ021442|SFTPA1|653509|surfactant protein A1##AK298092|SFTPA1|653509|surfactant protein A1##AK309518|SFTPA1|653509|surfactant protein A1##BC026229|SFTPA1|653509|surfactant protein A1##BC111570|SFTPA1|653509|surfactant protein A1	0.081888	
chr1	12178556	12178736	reg1003412.p1	3.933	+	M83554 NM_001243 BC136400 BC171762 S75768	-55102	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-99076	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-99112	+	D86042 BC063482 NM_152942 BC073839 BC141804	7370	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	48415	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	48465	+	M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr15	95569625	95569728	reg1015136.p2	3.933	+	NM_001159644 BC025708 BC111024 AK002037	-670367	+	NM_001159643 NM_018349 AY656717 BC131527	-728215	+	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	-794818	+	TSC_hg19_v1_chr15_-_95870310 BC040875	300643	-	BC106083 NM_001145155 FM208183	1299485	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	1304301	+	NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##BC040875|LOC400456|400456|uncharacterized LOC400456##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.0	
chr2	169706209	169706366	reg1038282.p1	3.933	+	NM_001039724 NM_001171632 BC014189 NM_052946 AK002203 AK290254 BC093072 AJ532842 DQ402497	-47160	+	AK093444 AX748130 NM_001171631	-63239	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	-393412	+	TSC_hg19_v1_chr2_-_169746945 AF225416 BC022255 NM_020675 AK291093	40654	-	BC104778 BC113376 NM_001081686 NM_021176 CR627438 HQ258182	51508	+	AF091582 NM_003742	181545	-	NM_001039724|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171632|NOSTRIN|115677|nitric oxide synthase trafficker##BC014189|NOSTRIN|115677|nitric oxide synthase trafficker##NM_052946|NOSTRIN|115677|nitric oxide synthase trafficker##AK002203|NOSTRIN|115677|nitric oxide synthase trafficker##AK290254|NOSTRIN|115677|nitric oxide synthase trafficker##BC093072|NOSTRIN|115677|nitric oxide synthase trafficker##AJ532842|NOSTRIN|115677|nitric oxide synthase trafficker##DQ402497|NOSTRIN|115677|nitric oxide synthase trafficker##AK093444|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171631|NOSTRIN|115677|nitric oxide synthase trafficker##NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6##AF225416|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC022255|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_020675|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK291093|SPC25|57405|SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC104778|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##BC113376|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##NM_001081686|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##NM_021176|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##CR627438|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##HQ258182|G6PC2|57818|glucose-6-phosphatase, catalytic, 2##AF091582|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11##NM_003742|ABCB11|8647|ATP-binding cassette, sub-family B (MDR/TAP), member 11	0.011118	
chr22	45631413	45631590	reg1026478.p2	3.933	+	AK315883 AK297058 TSC_hg19_v1_chr22_-_45609417	-22133	-	NM_015264 AK124648 TSC_hg19_v1_chr22_-_45608429	-23101	-	TSC_hg19_v1_chr22_-_45608255 AK309015 BC038414	-23249	-	CU012960 CU013248 CR456402 TSC_hg19_v1_chr22_-_45636622 NM_001009880	5115	-	TSC_hg19_v1_chr22_-_45636776 AK094937	5273	-	TSC_hg19_v1_chr22_+_45680833 AF085808 BC069544 NM_001167574 NM_006953 BC108900 CR456608 AB010637 AB528272 CU013204 CU013492	49359	+	AK315883|KIAA0930|23313|KIAA0930##AK297058|KIAA0930|23313|KIAA0930##NM_015264|KIAA0930|23313|KIAA0930##AK124648|KIAA0930|23313|KIAA0930##AK309015|KIAA0930|23313|KIAA0930##BC038414|KIAA0930|23313|KIAA0930##CU012960|KIAA0930|23313|KIAA0930##CU013248|KIAA0930|23313|KIAA0930##CR456402|KIAA0930|23313|KIAA0930##NM_001009880|KIAA0930|23313|KIAA0930##AK094937|KIAA0930|23313|KIAA0930##AF085808|UPK3A|7380|uroplakin 3A##BC069544|UPK3A|7380|uroplakin 3A##NM_001167574|UPK3A|7380|uroplakin 3A##NM_006953|UPK3A|7380|uroplakin 3A##BC108900|UPK3A|7380|uroplakin 3A##CR456608|UPK3A|7380|uroplakin 3A##AB010637|UPK3A|7380|uroplakin 3A##CU013204|UPK3A|7380|uroplakin 3A##CU013492|UPK3A|7380|uroplakin 3A	0.0	
chr3	179139452	179139562	reg1032580.p1	3.933	+	BC040557 NM_033540 TSC_hg19_v1_chr3_+_179065522 BC020661 AB043589 AK000700 AK314306	-73993	+	AB097862 AF003924 NM_016331	-97957	+	TSC_hg19_v1_chr3_+_179040818 BC026181	-98641	+	BC000873 TSC_hg19_v1_chr3_-_179169227 AK297174	29737	-	TSC_hg19_v1_chr3_-_179169361 AK001890 NM_021629	29858	-	TSC_hg19_v1_chr3_+_179280713 AB060168 NM_004301 NM_177989 NM_178042 AK098691 BC000949 AL136608 BC036371	141202	+	BC040557|MFN1|55669|mitofusin 1##NM_033540|MFN1|55669|mitofusin 1##BC020661|MFN1|55669|mitofusin 1##AB043589|MFN1|55669|mitofusin 1##AK000700|MFN1|55669|mitofusin 1##AK314306|MFN1|55669|mitofusin 1##AB097862|ZNF639|51193|zinc finger protein 639##AF003924|ZNF639|51193|zinc finger protein 639##NM_016331|ZNF639|51193|zinc finger protein 639##BC026181|ZNF639|51193|zinc finger protein 639##BC000873|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AK297174|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AK001890|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##NM_021629|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AB060168|ACTL6A|86|actin-like 6A##NM_004301|ACTL6A|86|actin-like 6A##NM_177989|ACTL6A|86|actin-like 6A##NM_178042|ACTL6A|86|actin-like 6A##AK098691|ACTL6A|86|actin-like 6A##BC000949|ACTL6A|86|actin-like 6A##AL136608|ACTL6A|86|actin-like 6A##BC036371|ACTL6A|86|actin-like 6A	0.130597	
chr6	15951521	15951605	reg1034106.p1	3.933	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-288273	-	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	-288386	-	TSC_hg19_v1_chr6_+_15249113 AK303610	-702450	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	177739	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	177874	+	TSC_hg19_v1_chr6_+_16143281 AK026739	191747	+	NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein	0.020908	
chr9	582033	582152	reg1035222.p1	3.933	+	TSC_hg19_v1_chr9_+_504732 BX648931 AL832454 NM_015158 AK292989 AL833161 AK290028 AB205106	-77344	+	TSC_hg19_v1_chr9_+_273045 HM991479 NM_001190458 NM_001193536 AK093572 AX748209 HM991480 BC045629 AK310555 BC130518 BC143929	-309039	+	NM_152569	-366200	-	AK311119 AB205111 TSC_hg19_v1_chr9_+_684289	102152	+	AB205112 TSC_hg19_v1_chr9_+_686677	104574	+	TSC_hg19_v1_chr9_+_706828 BC038116 NM_153186	124738	+	BX648931|KANK1|23189|KN motif and ankyrin repeat domains 1##AL832454|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_015158|KANK1|23189|KN motif and ankyrin repeat domains 1##AK292989|KANK1|23189|KN motif and ankyrin repeat domains 1##AL833161|KANK1|23189|KN motif and ankyrin repeat domains 1##AK290028|KANK1|23189|KN motif and ankyrin repeat domains 1##AB205106|KANK1|23189|KN motif and ankyrin repeat domains 1##HM991479|DOCK8|81704|dedicator of cytokinesis 8##NM_001190458|DOCK8|81704|dedicator of cytokinesis 8##NM_001193536|DOCK8|81704|dedicator of cytokinesis 8##AK093572|DOCK8|81704|dedicator of cytokinesis 8##HM991480|DOCK8|81704|dedicator of cytokinesis 8##BC045629|DOCK8|81704|dedicator of cytokinesis 8##AK310555|DOCK8|81704|dedicator of cytokinesis 8##BC130518|DOCK8|81704|dedicator of cytokinesis 8##BC143929|DOCK8|81704|dedicator of cytokinesis 8##NM_152569|C9orf66|157983|chromosome 9 open reading frame 66##BC038116|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_153186|KANK1|23189|KN motif and ankyrin repeat domains 1	0.91139	CTCF.p2:12:0.911
chr10	3780157	3780320	reg1031901.p1	3.932	+	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-565233	-	CU678866 TSC_hg19_v1_chr10_-_3214975 AB384562 BC005025 AK225084 AK293788 AK315117 AK294865 AK299464 AK303406 BC095422 BX649017 AF061243	-565268	-	BC045577 TSC_hg19_v1_chr10_-_3214936	-565313	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	47073	-	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	47271	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1088180	+	BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC005025|PITRM1|10531|pitrilysin metallopeptidase 1##AK225084|PITRM1|10531|pitrilysin metallopeptidase 1##AK293788|PITRM1|10531|pitrilysin metallopeptidase 1##AK315117|PITRM1|10531|pitrilysin metallopeptidase 1##AK294865|PITRM1|10531|pitrilysin metallopeptidase 1##AK299464|PITRM1|10531|pitrilysin metallopeptidase 1##AK303406|PITRM1|10531|pitrilysin metallopeptidase 1##BC095422|PITRM1|10531|pitrilysin metallopeptidase 1##BX649017|PITRM1|10531|pitrilysin metallopeptidase 1##AF061243|PITRM1|10531|pitrilysin metallopeptidase 1##BC045577|PITRM1|10531|pitrilysin metallopeptidase 1##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2	0.0	
chr11	115740764	115740945	reg1007055.p2	3.932	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-365674	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-652206	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1191606	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	902844	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	917861	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	917884	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.014263	
chr11	62572799	62572917	reg1030832.p1	3.932	+	BC042801 TSC_hg19_v1_chr11_-_62559478 BC008643 BC094837 BC035565 BC020914 NM_001080501 BC127679	-13401	-	TSC_hg19_v1_chr11_+_62554875 NM_199337 BC051355	-17993	+	AK001998 TSC_hg19_v1_chr11_-_62554819	-18051	-	AF112880 AF126246 AJ132712 AB528336 DQ892931 DQ896180 CU678798 BC028041 AB209915 BC004904 TSC_hg19_v1_chr11_-_62572913 AK304743 AK304082 AK307998 AK307961 AK304137 NM_001081491 NM_006362	37	-	BT019646 BT019647 CU678088 U26648 TSC_hg19_v1_chr11_-_62599128 AB464274	26017	-	TSC_hg19_v1_chr11_-_62599513 BC002645	26623	-	BC042801|TMEM223|79064|transmembrane protein 223##BC008643|TMEM223|79064|transmembrane protein 223##BC094837|TMEM223|79064|transmembrane protein 223##BC035565|TMEM223|79064|transmembrane protein 223##BC020914|TMEM223|79064|transmembrane protein 223##NM_001080501|TMEM223|79064|transmembrane protein 223##BC127679|TMEM223|79064|transmembrane protein 223##NM_199337|TMEM179B|374395|transmembrane protein 179B##BC051355|TMEM179B|374395|transmembrane protein 179B##AF112880|NXF1|10482|nuclear RNA export factor 1##AF126246|NXF1|10482|nuclear RNA export factor 1##AJ132712|NXF1|10482|nuclear RNA export factor 1##DQ892931|NXF1|10482|nuclear RNA export factor 1##DQ896180|NXF1|10482|nuclear RNA export factor 1##BC028041|NXF1|10482|nuclear RNA export factor 1##AB209915|NXF1|10482|nuclear RNA export factor 1##BC004904|NXF1|10482|nuclear RNA export factor 1##AK304743|NXF1|10482|nuclear RNA export factor 1##AK304082|NXF1|10482|nuclear RNA export factor 1##AK307998|NXF1|10482|nuclear RNA export factor 1##AK307961|NXF1|10482|nuclear RNA export factor 1##AK304137|NXF1|10482|nuclear RNA export factor 1##NM_001081491|NXF1|10482|nuclear RNA export factor 1##NM_006362|NXF1|10482|nuclear RNA export factor 1##BT019646|STX5|6811|syntaxin 5##BT019647|STX5|6811|syntaxin 5##U26648|STX5|6811|syntaxin 5##BC002645|STX5|6811|syntaxin 5	0.0	
chr14	50319571	50319751	reg1028954.p1	3.932	+	TSC_hg19_v1_chr14_-_50319530 AK295010 AK293236 BC006001 BC056687 NM_004713	-128	-	TSC_hg19_v1_chr14_-_50319497 AK304695 AK308537	-165	-	TSC_hg19_v1_chr14_-_50319495 AK000913	-178	-	TSC_hg19_v1_chr14_-_50329567 X02067	9935	-	TSC_hg19_v1_chr14_+_50359731 NM_001663	40069	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	40157	+	AK295010|NEMF|9147|nuclear export mediator factor##AK293236|NEMF|9147|nuclear export mediator factor##BC006001|NEMF|9147|nuclear export mediator factor##BC056687|NEMF|9147|nuclear export mediator factor##NM_004713|NEMF|9147|nuclear export mediator factor##AK304695|NEMF|9147|nuclear export mediator factor##AK308537|NEMF|9147|nuclear export mediator factor##AK000913|NEMF|9147|nuclear export mediator factor##X02067|RN7SL2|378706|RNA, 7SL, cytoplasmic 2##NM_001663|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6	0.0	
chr15	49284990	49285084	reg1025783.p2	3.932	+	BC033907 NM_203349	-29397	-	TSC_hg19_v1_chr15_+_49170330 NM_014335 BC114944 BC114946 AK315365 AF092135 AF109873 AF349444 AK098383 AL109701 BC024151 AL357456 BC007944 AB527924 AF274951	-114665	+	BC117182 TSC_hg19_v1_chr15_-_49103277 AB020719 BC069186 AK303805 BX648822 BC107721 NM_001194998 NM_014985	-181775	-	CU689588 AB385300 TSC_hg19_v1_chr15_-_49338644 D87445 AK307480 AK308183 BC008635 BC033001 NM_001193489 NM_014701	53599	-	AF120268 L40388 TSC_hg19_v1_chr15_-_49447811 AB462991 CR542063 CU680378 EU446744 EU831466 EU831553 AK222590 AB209799 AF100762 AF212227 AF084260 BC012629 AK312643 AK295598 NM_001143887 NM_004236	162772	-	TSC_hg19_v1_chr15_+_49447990 AF461816 AL832745 NM_001001556	162954	+	BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_014335|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114946|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK315365|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF092135|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF109873|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF349444|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK098383|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL109701|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC024151|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL357456|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC007944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC117182|CEP152|22995|centrosomal protein 152kDa##AB020719|CEP152|22995|centrosomal protein 152kDa##BC069186|CEP152|22995|centrosomal protein 152kDa##AK303805|CEP152|22995|centrosomal protein 152kDa##BX648822|CEP152|22995|centrosomal protein 152kDa##BC107721|CEP152|22995|centrosomal protein 152kDa##NM_001194998|CEP152|22995|centrosomal protein 152kDa##NM_014985|CEP152|22995|centrosomal protein 152kDa##D87445|SECISBP2L|9728|SECIS binding protein 2-like##AK307480|SECISBP2L|9728|SECIS binding protein 2-like##AK308183|SECISBP2L|9728|SECIS binding protein 2-like##BC008635|SECISBP2L|9728|SECIS binding protein 2-like##BC033001|SECISBP2L|9728|SECIS binding protein 2-like##NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like##NM_014701|SECISBP2L|9728|SECIS binding protein 2-like##AF120268|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##L40388|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##CR542063|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU446744|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831466|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831553|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK222590|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AB209799|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF100762|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF212227|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF084260|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##BC012629|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK312643|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK295598|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_001143887|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_004236|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF461816|GALK2|2585|galactokinase 2##AL832745|GALK2|2585|galactokinase 2##NM_001001556|GALK2|2585|galactokinase 2	0.0	
chr17	79677544	79677610	reg1038829.p1	3.932	+	TSC_hg19_v1_chr17_+_79670506 BC007497 U25041 EF036488	-7065	+	TSC_hg19_v1_chr17_+_79670396 NM_002949 AK297076 X79865 BC002344	-7138	+	TSC_hg19_v1_chr17_-_79670327 AK026523	-7247	-	TSC_hg19_v1_chr17_+_79679341 BC015797	1747	+	BC007355 NM_012140 TSC_hg19_v1_chr17_+_79679381 AK075249	1804	+	TSC_hg19_v1_chr17_+_79679402 AJ131613 DQ893263 DQ896592 CU675633	1850	+	BC007497|MRPL12|6182|mitochondrial ribosomal protein L12##U25041|MRPL12|6182|mitochondrial ribosomal protein L12##EF036488|MRPL12|6182|mitochondrial ribosomal protein L12##NM_002949|MRPL12|6182|mitochondrial ribosomal protein L12##X79865|MRPL12|6182|mitochondrial ribosomal protein L12##BC002344|MRPL12|6182|mitochondrial ribosomal protein L12##BC015797|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##BC007355|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##NM_012140|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##AK075249|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##AJ131613|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##DQ893263|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##DQ896592|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10	0.0	
chr2	217526399	217526496	reg1037927.p2	3.932	+	TSC_hg19_v1_chr2_+_217498216 DQ893450 EU176752	-28149	+	TSC_hg19_v1_chr2_+_217498142 NM_000597 X16302 BC071967 AB209509 BC004312 BC009902 BC012769 M35410	-28311	+	NM_000998 TSC_hg19_v1_chr2_+_217363566 AK289472 BC016748 BC067789 L22154 AK023419 AK291857 BC063476 L06499 BC014262 BC082239 BC047872	-162894	+	L27560 AF147308 TSC_hg19_v1_chr2_-_217540846	14337	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	33119	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	33813	-	DQ893450|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##EU176752|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##NM_000597|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##X16302|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC071967|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##AB209509|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC004312|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC009902|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##BC012769|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##M35410|IGFBP2|3485|insulin-like growth factor binding protein 2, 36kDa##NM_000998|RPL37A|6168|ribosomal protein L37a##AK289472|RPL37A|6168|ribosomal protein L37a##BC016748|RPL37A|6168|ribosomal protein L37a##BC067789|RPL37A|6168|ribosomal protein L37a##L22154|RPL37A|6168|ribosomal protein L37a##AK023419|RPL37A|6168|ribosomal protein L37a##AK291857|RPL37A|6168|ribosomal protein L37a##BC063476|RPL37A|6168|ribosomal protein L37a##L06499|RPL37A|6168|ribosomal protein L37a##BC014262|RPL37A|6168|ribosomal protein L37a##BC082239|RPL37A|6168|ribosomal protein L37a##BC047872|RPL37A|6168|ribosomal protein L37a##L27560|IGFBP5|3488|insulin-like growth factor binding protein 5##AF147308|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5	0.998615	CTCF.p2:6:0.999
chr2	98578231	98578412	reg1024610.p2	3.932	+	AK025852 TSC_hg19_v1_chr2_-_98408976	-169399	-	AB083211 NM_207519	-227453	+	L05148 NM_001079 AK303341 AK310637 AK310628 BC053878	-248279	+	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	33865	-	TSC_hg19_v1_chr2_-_98612395 AK098792	34082	-	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	125325	+	AK025852|TMEM131|23505|transmembrane protein 131##AB083211|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_207519|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##L05148|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_001079|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK303341|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310637|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310628|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##BC053878|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##AK098792|TMEM131|23505|transmembrane protein 131##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B	0.0	
chr5	177624114	177624231	reg1031303.p2	3.932	+	TSC_hg19_v1_chr5_-_177580916 NM_001034833 NM_017838	-43236	-	CR457238 AF401219 TSC_hg19_v1_chr5_-_177580868 AK000486 BC000009 AF161404 AJ293309 BC006387	-43315	-	TSC_hg19_v1_chr5_+_177558026 BC009911 DQ494789 NM_022762	-66140	+	TSC_hg19_v1_chr5_+_177631530 AK097657 NM_004499 NM_031266	7342	+	AK054600 TSC_hg19_v1_chr5_+_177631533	7361	+	AK223425 TSC_hg19_v1_chr5_+_177631534 BC004561 BC009359 BC001616 BC002625 BC015556 BC036708 M65028	7400	+	NM_001034833|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##NM_017838|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##CR457238|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AF401219|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AK000486|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##BC000009|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AF161404|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AJ293309|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##BC006387|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##BC009911|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##DQ494789|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##NM_022762|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK097657|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##NM_004499|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##NM_031266|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##AK054600|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##AK223425|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##BC004561|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##BC009359|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##BC001616|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##BC002625|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##BC015556|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##BC036708|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##M65028|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	0.020585	
chr8	41470216	41470396	reg1004030.p1	3.932	+	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	-34612	+	TSC_hg19_v1_chr8_+_41386779 AK095334 AK313373	-83534	+	NM_032336 AK299207 BC027454 TSC_hg19_v1_chr8_+_41386745 BC005995	-83569	+	AB587362 AK057898 NM_152568	34569	-	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	52457	-	M28880 NM_000037 NM_020475 NM_020476 NM_020477 X16609 TSC_hg19_v1_chr8_-_41655141	184834	-	NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AK095334|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK313373|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##NM_032336|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK299207|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC027454|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC005995|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic##M28880|ANK1|286|ankyrin 1, erythrocytic##NM_000037|ANK1|286|ankyrin 1, erythrocytic##NM_020475|ANK1|286|ankyrin 1, erythrocytic##NM_020476|ANK1|286|ankyrin 1, erythrocytic##NM_020477|ANK1|286|ankyrin 1, erythrocytic##X16609|ANK1|286|ankyrin 1, erythrocytic	0.0	
chr9	139439089	139439188	reg1031756.p1	3.932	+	TSC_hg19_v1_chr9_-_139378220 AB593115	-60896	-	BC036221 NM_152571 AK055336	-61168	+	TSC_hg19_v1_chr9_-_139377505 AB002308 NM_014866	-61634	-	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	1112	-	NM_016215 AL512735 AY358903 BC088371 AY358902	118263	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	121077	+	AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##AB002308|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##NM_014866|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7	0.0	
chr9	36996169	36996349	reg1012240.p2	3.932	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-423335	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-595084	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-595362	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	38157	-	TSC_hg19_v1_chr9_+_37079908 AK091718	83647	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	83749	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.0	
chr11	43157719	43157900	reg1038376.p1	3.931	+	AB046800 NM_020929	-2842146	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-2843215	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-6538007	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	175709	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	175755	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	175831	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.0	
chr1	181057816	181057936	reg1034803.p1	3.931	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-11	+	NM_016545	-239	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-54726	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	394824	+	BC137223 BC137224 AK128654 NM_001009992	972921	-	TSC_hg19_v1_chr1_-_182354649 AK301600	1296806	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.0	
chr12	112123920	112124079	reg1035028.p2	3.931	+	AK092356 AK310923 AX747497 TSC_hg19_v1_chr12_+_112123871 AL832043 BC015056 AY323912 BC126358	-93	+	TSC_hg19_v1_chr12_+_112123859 NM_001136538 NM_025247	-145	+	TSC_hg19_v1_chr12_-_112123771 NM_006768	-203	-	NM_000690 NM_001204889 TSC_hg19_v1_chr12_+_112204694	80693	+	TSC_hg19_v1_chr12_+_112204765 AY621070 BC002967 X05409 AK223373 AK301375 Y00109 AK314856 BC071839 AB385105 CR456991 CU678320	80749	+	TSC_hg19_v1_chr12_-_112279735 BC071748 BC007973 BC015633 BC032560 AK124158 BC107695	155733	-	AK092356|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AK310923|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AL832043|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC015056|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##AY323912|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##BC126358|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##NM_001136538|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##NM_025247|ACAD10|80724|acyl-CoA dehydrogenase family, member 10##NM_006768|BRAP|8315|BRCA1 associated protein##NM_000690|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##NM_001204889|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AY621070|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC002967|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##X05409|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK223373|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK301375|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##Y00109|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##AK314856|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC071839|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##CR456991|ALDH2|217|aldehyde dehydrogenase 2 family (mitochondrial)##BC007973|C12orf47|51275|chromosome 12 open reading frame 47##BC015633|C12orf47|51275|chromosome 12 open reading frame 47##BC032560|C12orf47|51275|chromosome 12 open reading frame 47	0.0	
chr12	118808331	118808438	reg1039119.p1	3.931	+	TSC_hg19_v1_chr12_+_118573963 AB528565 X85033	-234406	+	TSC_hg19_v1_chr12_+_118573928 BC008714 AK311927 D16111 BC018799 AK308056 BC031102 AK299414 HM131449	-234461	+	TSC_hg19_v1_chr12_+_118573907 NM_002567 BC017396 X75252 AK226006	-234509	+	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	2244	-	TSC_hg19_v1_chr12_-_118810713 NM_016281	2346	-	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	6018	+	X85033|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC008714|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK311927|PEBP1|5037|phosphatidylethanolamine binding protein 1##D16111|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC018799|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK308056|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC031102|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK299414|PEBP1|5037|phosphatidylethanolamine binding protein 1##HM131449|PEBP1|5037|phosphatidylethanolamine binding protein 1##NM_002567|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC017396|PEBP1|5037|phosphatidylethanolamine binding protein 1##X75252|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK226006|PEBP1|5037|phosphatidylethanolamine binding protein 1##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##NM_016281|TAOK3|51347|TAO kinase 3##BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)	0.0	
chr1	222013200	222013380	reg1024415.p2	3.931	+	TSC_hg19_v1_chr1_-_221915485 NM_007207 NM_144729	-97804	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	-97860	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	-97882	-	AY358602 BC007638 BC016552 NM_024746	708144	-	L39060 AK001054 AK290970 TSC_hg19_v1_chr1_-_222763247 BC013808 AK315740 AK299536 NM_001201536 NM_005681 NM_139352	749887	-	TSC_hg19_v1_chr1_+_222791438 NM_198551 AK307412 AY359091 DQ166034	778110	+	NM_007207|DUSP10|11221|dual specificity phosphatase 10##NM_144729|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AY358602|HHIPL2|79802|HHIP-like 2##BC007638|HHIPL2|79802|HHIP-like 2##BC016552|HHIPL2|79802|HHIP-like 2##NM_024746|HHIPL2|79802|HHIP-like 2##L39060|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK001054|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK290970|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##BC013808|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK315740|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##AK299536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_001201536|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_005681|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_139352|TAF1A|9015|TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa##NM_198551|MIA3|375056|melanoma inhibitory activity family, member 3##AK307412|MIA3|375056|melanoma inhibitory activity family, member 3##AY359091|MIA3|375056|melanoma inhibitory activity family, member 3##DQ166034|MIA3|375056|melanoma inhibitory activity family, member 3	0.0	
chr13	25245200	25245360	reg1008106.p1	3.931	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	-158369	-	BC040438 NM_178540 AY358145	-361563	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	-400382	+	AK292968 NM_001185085 NM_001676	9268	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	93039	+	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	251689	-	BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13##AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J	0.408341	CTCF.p2:5:0.287
chr15	40094355	40094535	reg1006595.p2	3.931	+	AK091251 TSC_hg19_v1_chr15_+_40075106	-19339	+	AK093308 AX748045 BC045191 NM_152597	-19417	-	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	-221116	+	CU688250 TSC_hg19_v1_chr15_-_40212342	117840	-	BC067106 TSC_hg19_v1_chr15_-_40212465	118043	-	TSC_hg19_v1_chr15_-_40213138 D38449 NM_007223	118682	-	AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##BC067106|GPR176|11245|G protein-coupled receptor 176##D38449|GPR176|11245|G protein-coupled receptor 176##NM_007223|GPR176|11245|G protein-coupled receptor 176	0.0	
chr16	4526371	4526551	reg1031743.p2	3.931	+	NM_001127204 NM_002134 AK313660 TSC_hg19_v1_chr16_+_4526411 BC002396 S34389 AK222629	-58	+	AF225419 NM_020677	-1566	-	NM_001127206	-1743	+	AK093388 NM_001127205	19397	+	AK311295 BC007604 TSC_hg19_v1_chr16_-_4563123	36590	-	TSC_hg19_v1_chr16_-_4588442 AF195661 AL833853 NM_001199054	61976	-	NM_001127204|HMOX2|3163|heme oxygenase (decycling) 2##NM_002134|HMOX2|3163|heme oxygenase (decycling) 2##AK313660|HMOX2|3163|heme oxygenase (decycling) 2##BC002396|HMOX2|3163|heme oxygenase (decycling) 2##S34389|HMOX2|3163|heme oxygenase (decycling) 2##AK222629|HMOX2|3163|heme oxygenase (decycling) 2##AF225419|NMRAL1|57407|NmrA-like family domain containing 1##NM_020677|NMRAL1|57407|NmrA-like family domain containing 1##NM_001127206|HMOX2|3163|heme oxygenase (decycling) 2##AK093388|HMOX2|3163|heme oxygenase (decycling) 2##NM_001127205|HMOX2|3163|heme oxygenase (decycling) 2##AK311295|C16orf5|29965|chromosome 16 open reading frame 5##BC007604|C16orf5|29965|chromosome 16 open reading frame 5##AF195661|C16orf5|29965|chromosome 16 open reading frame 5##AL833853|C16orf5|29965|chromosome 16 open reading frame 5##NM_001199054|C16orf5|29965|chromosome 16 open reading frame 5	0.0	
chr16	70510470	70510650	reg1037991.p1	3.931	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	-7720	+	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	-22061	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	-37579	-	BC027726 AB088369 BC128144 BC128145 AK022874 BC072438 TSC_hg19_v1_chr16_-_70557452 BX648010 AK293235 AK297557 AK096557 NM_001195139 NM_015386	46884	-	TSC_hg19_v1_chr16_+_70557713 NM_012426 AK291768	47140	+	BC009780 TSC_hg19_v1_chr16_+_70557724	47164	+	AK096727|FUK|197258|fucokinase##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##BC027726|COG4|25839|component of oligomeric golgi complex 4##AB088369|COG4|25839|component of oligomeric golgi complex 4##BC128144|COG4|25839|component of oligomeric golgi complex 4##BC128145|COG4|25839|component of oligomeric golgi complex 4##AK022874|COG4|25839|component of oligomeric golgi complex 4##BC072438|COG4|25839|component of oligomeric golgi complex 4##BX648010|COG4|25839|component of oligomeric golgi complex 4##AK293235|COG4|25839|component of oligomeric golgi complex 4##AK297557|COG4|25839|component of oligomeric golgi complex 4##AK096557|COG4|25839|component of oligomeric golgi complex 4##NM_001195139|COG4|25839|component of oligomeric golgi complex 4##NM_015386|COG4|25839|component of oligomeric golgi complex 4##NM_012426|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##AK291768|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##BC009780|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa	0.0	
chr22	33866564	33866704	reg1033189.p1	3.931	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-412279	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-463908	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-668882	+	AJ007583 AB011181 NM_004737 NM_133642	449736	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1595515	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1786842	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr3	10265561	10265684	reg1025547.p2	3.931	+	NM_001570 BC125184 AK299033 AK312841 TSC_hg19_v1_chr3_+_10206602 AF026273 AB587544 AJ496794	-59022	+	TSC_hg19_v1_chr3_+_10183517 AB528056	-82084	+	AK304002 TSC_hg19_v1_chr3_+_10183487	-82124	+	TSC_hg19_v1_chr3_+_10290182 NM_014760	24553	+	TSC_hg19_v1_chr3_+_10290210 D86972	24640	+	TSC_hg19_v1_chr3_+_10290370 AK289794 BC090935 BC101776 BC101770	24900	+	NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2##BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK304002|VHL|7428|von Hippel-Lindau tumor suppressor##NM_014760|TATDN2|9797|TatD DNase domain containing 2##D86972|TATDN2|9797|TatD DNase domain containing 2##AK289794|TATDN2|9797|TatD DNase domain containing 2##BC090935|TATDN2|9797|TatD DNase domain containing 2##BC101776|TATDN2|9797|TatD DNase domain containing 2##BC101770|TATDN2|9797|TatD DNase domain containing 2	0.0	
chr4	4882293	4882360	reg1006568.p1	3.931	+	TSC_hg19_v1_chr4_+_4861391 NM_002448 AK290636 M97676 BC021285	-20928	+	TSC_hg19_v1_chr4_+_4543925 BC025734	-338442	+	TSC_hg19_v1_chr4_-_4543750 NM_016930	-338565	-	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	138820	-	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	170954	+	TSC_hg19_v1_chr4_+_5053464 AJ250839 NM_018401 BC038238 AB528925 DQ890554 DQ893714	171201	+	NM_002448|MSX1|4487|msh homeobox 1##AK290636|MSX1|4487|msh homeobox 1##M97676|MSX1|4487|msh homeobox 1##BC021285|MSX1|4487|msh homeobox 1##BC025734|LOC100507266|100507266|uncharacterized LOC100507266##NM_016930|STX18|53407|syntaxin 18##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B##AJ250839|STK32B|55351|serine/threonine kinase 32B##NM_018401|STK32B|55351|serine/threonine kinase 32B##BC038238|STK32B|55351|serine/threonine kinase 32B##DQ890554|STK32B|55351|serine/threonine kinase 32B##DQ893714|STK32B|55351|serine/threonine kinase 32B	0.05519	
chr5	54048987	54049101	reg1033014.p1	3.931	+	TSC_hg19_v1_chr5_+_53813761 AF395536	-235273	+	TSC_hg19_v1_chr5_+_53813656 BC117218 BC117220	-235371	+	TSC_hg19_v1_chr5_+_53813588 AK304195 NM_001145427 BC060791 BC067860 NM_001102575 NM_052870	-235499	+	AB590689 CU680150 AJ973643 X89426 BC011989 NM_001135604 NM_007036 TSC_hg19_v1_chr5_-_54281422 AK300634 AK311817	232339	-	AK312074 BC035802 NM_002104 U26174 DQ894093 EU176203 U35237	271072	+	NM_006144 BC015739 DQ893071 DQ896326 AB528402 CR456968 M18737	349447	+	AF395536|SNX18|112574|sorting nexin 18##BC117218|SNX18|112574|sorting nexin 18##BC117220|SNX18|112574|sorting nexin 18##AK304195|SNX18|112574|sorting nexin 18##NM_001145427|SNX18|112574|sorting nexin 18##BC060791|SNX18|112574|sorting nexin 18##BC067860|SNX18|112574|sorting nexin 18##NM_001102575|SNX18|112574|sorting nexin 18##NM_052870|SNX18|112574|sorting nexin 18##AJ973643|ESM1|11082|endothelial cell-specific molecule 1##X89426|ESM1|11082|endothelial cell-specific molecule 1##BC011989|ESM1|11082|endothelial cell-specific molecule 1##NM_001135604|ESM1|11082|endothelial cell-specific molecule 1##NM_007036|ESM1|11082|endothelial cell-specific molecule 1##AK300634|ESM1|11082|endothelial cell-specific molecule 1##AK311817|ESM1|11082|endothelial cell-specific molecule 1##AK312074|GZMK|3003|granzyme K (granzyme 3; tryptase II)##BC035802|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_002104|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U26174|GZMK|3003|granzyme K (granzyme 3; tryptase II)##DQ894093|GZMK|3003|granzyme K (granzyme 3; tryptase II)##EU176203|GZMK|3003|granzyme K (granzyme 3; tryptase II)##U35237|GZMK|3003|granzyme K (granzyme 3; tryptase II)##NM_006144|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##BC015739|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ893071|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##DQ896326|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##CR456968|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)##M18737|GZMA|3001|granzyme A (granzyme 1, cytotoxic T-lymphocyte-associated serine esterase 3)	0.427558	CTCF.p2:105:0.428
chr6	41513885	41513990	reg1027714.p2	3.931	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-210371	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-259513	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-317869	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	222	+	TSC_hg19_v1_chr6_+_41514342 BC052803	400	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	92285	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	0.0	
chr9	15506074	15506200	reg1030056.p2	3.931	+	TSC_hg19_v1_chr9_+_15422877 AB527501 EU446705 BC014985	-83225	+	TSC_hg19_v1_chr9_+_15422873 BC121011 BC121012 U66413 BC108743 U71300 AK293310	-83269	+	TSC_hg19_v1_chr9_+_15422741 BC036031 NM_001039697	-83429	+	AF098483 AF098482 NM_021144	4110	-	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	4823	-	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	46884	+	EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC121011|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC121012|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##U66413|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC108743|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##U71300|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##AK293310|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC036031|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##NM_001039697|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93	0.062466	
chrX	12988938	12989032	reg1038170.p1	3.931	+	AK314240 NM_138636 AF246971 AY358296 BC101074 BC101075 BC101076 BC101077 AF245703	-64228	+	AK313858 BC033651 NM_016562 AF240467 AF245702	-103787	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	-179417	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	4255	+	TSC_hg19_v1_chrX_+_12994293 BC104464 BC104465 BT007090 X02493	5358	+	BX647580 AK313776 AF494345 BX648111 BX648919 NM_174901	73833	-	AK314240|TLR8|51311|toll-like receptor 8##NM_138636|TLR8|51311|toll-like receptor 8##AF246971|TLR8|51311|toll-like receptor 8##AY358296|TLR8|51311|toll-like receptor 8##BC101074|TLR8|51311|toll-like receptor 8##BC101075|TLR8|51311|toll-like receptor 8##BC101076|TLR8|51311|toll-like receptor 8##BC101077|TLR8|51311|toll-like receptor 8##AF245703|TLR8|51311|toll-like receptor 8##AK313858|TLR7|51284|toll-like receptor 7##BC033651|TLR7|51284|toll-like receptor 7##NM_016562|TLR7|51284|toll-like receptor 7##AF240467|TLR7|51284|toll-like receptor 7##AF245702|TLR7|51284|toll-like receptor 7##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked##BC104464|TMSB4X|7114|thymosin beta 4, X-linked##BC104465|TMSB4X|7114|thymosin beta 4, X-linked##BT007090|TMSB4X|7114|thymosin beta 4, X-linked##X02493|TMSB4X|7114|thymosin beta 4, X-linked##BX647580|FAM9C|171484|family with sequence similarity 9, member C##AK313776|FAM9C|171484|family with sequence similarity 9, member C##AF494345|FAM9C|171484|family with sequence similarity 9, member C##BX648111|FAM9C|171484|family with sequence similarity 9, member C##BX648919|FAM9C|171484|family with sequence similarity 9, member C##NM_174901|FAM9C|171484|family with sequence similarity 9, member C	0.0	
chr10	97803277	97803383	reg1036839.p1	3.930	+	NM_001001732 NM_001159747 AK302377 BC075861	-43466	+	AK294399 NM_001130446	-135609	+	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	-287790	+	TSC_hg19_v1_chr10_+_97803318 BC043175 NM_001134375 NM_001134376 NM_019084 AK092360 AK297264 AX747499	51	+	CU692146 TSC_hg19_v1_chr10_+_97804165	829	+	TSC_hg19_v1_chr10_-_97849968 AK096469 AK091396	46629	-	NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B##NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##BC043175|CCNJ|54619|cyclin J##NM_001134375|CCNJ|54619|cyclin J##NM_001134376|CCNJ|54619|cyclin J##NM_019084|CCNJ|54619|cyclin J##AK092360|CCNJ|54619|cyclin J##AK297264|CCNJ|54619|cyclin J##AK096469|LOC728558|728558|uncharacterized LOC728558##AK091396|LOC728558|728558|uncharacterized LOC728558	0.0	
chr1	112197573	112197751	reg1038697.p2	3.930	+	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	-35195	+	BC041707 BC064411 NM_001081976	-91083	-	NM_000677 NM_020683	-150920	-	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	84293	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	100557	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	100773	-	NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B	0.0	
chr1	202129794	202129960	reg1038022.p1	3.930	+	TSC_hg19_v1_chr1_-_202129731 AK301051 AK301757 AK311661 AK293186 AK301980	-133	-	M64322 TSC_hg19_v1_chr1_-_202129719 AK225920 D11327	-163	-	BC001746 NM_080588	-759	-	TSC_hg19_v1_chr1_-_202130715 AK127214 AK302869 NM_001199797 NM_002832	824	-	NM_001017403 AB049405	33297	+	AY358119 BC038795 NM_021636 BC047905	43015	+	AK301051|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301757|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK311661|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK293186|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK301980|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##M64322|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK225920|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##D11327|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##BC001746|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_080588|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK127214|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##AK302869|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_001199797|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_002832|PTPN7|5778|protein tyrosine phosphatase, non-receptor type 7##NM_001017403|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AB049405|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##AY358119|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC038795|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##NM_021636|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6##BC047905|LGR6|59352|leucine-rich repeat containing G protein-coupled receptor 6	0.910666	CTCF.p2:-27:0.884
chr12	57632628	57632809	reg1000449.p1	3.930	+	CR457176 AF164796 AK129629 TSC_hg19_v1_chr12_-_57630888	-1839	-	NM_001166358 BX647711 AK301443 TSC_hg19_v1_chr12_+_57623972 BX648847 NM_001166359 NM_001166357 BC004189 BC004215 BC008711 AK296183 AK297173 AK315916	-8730	+	NM_001166356 NM_005412 TSC_hg19_v1_chr12_+_57623504 AK055053 AK223555 AK298231 AK301339 AK303827 BC032584 BC044211 AK295941 BC008066 BC012833 BC011911 BC091501 CU680112 CU689432 AB527799 BT006866 DQ891309 DQ894430	-9260	+	BC011910 NM_020142 AK094275	1782	-	TSC_hg19_v1_chr12_-_57642922 CU675915	10262	-	AK300688 BC008069 AK057013 AK311513 NM_145064	12218	-	CR457176|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AF164796|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AK129629|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##NM_001166358|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX647711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301443|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BX648847|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166359|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166357|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008711|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK296183|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK297173|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK315916|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_001166356|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##NM_005412|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK055053|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK223555|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK298231|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK301339|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK303827|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC032584|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC044211|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##AK295941|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC008066|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC011911|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC091501|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BT006866|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ891309|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##DQ894430|SHMT2|6472|serine hydroxymethyltransferase 2 (mitochondrial)##BC011910|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##NM_020142|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AK094275|NDUFA4L2|56901|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2##AK300688|STAC3|246329|SH3 and cysteine rich domain 3##BC008069|STAC3|246329|SH3 and cysteine rich domain 3##AK057013|STAC3|246329|SH3 and cysteine rich domain 3##AK311513|STAC3|246329|SH3 and cysteine rich domain 3##NM_145064|STAC3|246329|SH3 and cysteine rich domain 3	0.0	
chr13	24001101	24001213	reg1036198.p2	3.930	+	TSC_hg19_v1_chr13_-_23949652 AK125458	-51507	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	-246042	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-1756009	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	6683	-	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	143298	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	152375	+	AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19	0.530682	CTCF.p2:-5:0.454
chr19	10529329	10529418	reg1027560.p1	3.930	+	AY593872 NM_001243121 TSC_hg19_v1_chr19_+_10527555	-1870	+	TSC_hg19_v1_chr19_-_10514250 NM_007065	-15117	-	TSC_hg19_v1_chr19_-_10514219 BC000083 BC008793 U63131	-15160	-	TSC_hg19_v1_chr19_+_10531189 L20965 NM_001111307	1857	+	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	12054	+	AF073745 NM_001111309	13737	+	AY593872|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001243121|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_007065|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC000083|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BC008793|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U63131|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##L20965|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111307|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AF073745|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111309|PDE4A|5141|phosphodiesterase 4A, cAMP-specific	0.0	
chr1	9686310	9686467	reg1000875.p1	3.930	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-37432	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-86752	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	-86856	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	25416	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	197507	-	TSC_hg19_v1_chr1_-_9884023 AK304813	197633	-	BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1	0.0	
chr22	22385849	22385931	reg1002960.p4	3.930	+	TSC_hg19_v1_chr22_+_22385369 AF026922	-525	+	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	-48704	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	-48743	-	X02422 TSC_hg19_v1_chr22_+_22550141	164239	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	164288	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	183374	+	AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57	0.0	
chr6	158183846	158183948	reg1032021.p1	3.930	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-381358	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-438680	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-439313	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	60392	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	60477	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	218990	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	1.205167	CTCF.p2:-5:0.379	CTCF.p2:-92:0.761
chr7	113350486	113350609	reg1035472.p1	3.930	+	TSC_hg19_v1_chr7_-_112758613 BC107860	-591918	-	TSC_hg19_v1_chr7_-_112758606 BC065765 BX537645	-591941	-	NM_001146265 NM_018970 TSC_hg19_v1_chr7_-_112727844	-622707	-	X78578 AF024579 HQ258594 BC070313 BC056666 NM_002711 BC126451 BC126453	208536	-	TSC_hg19_v1_chr7_+_113726381 AK131266	375874	+	TSC_hg19_v1_chr7_+_113726514 AF454830	375956	+	BC107860|LOC401397|401397|uncharacterized LOC401397##BC065765|LOC401397|401397|uncharacterized LOC401397##BX537645|LOC401397|401397|uncharacterized LOC401397##NM_001146265|GPR85|54329|G protein-coupled receptor 85##NM_018970|GPR85|54329|G protein-coupled receptor 85##X78578|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AF024579|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##HQ258594|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC070313|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC056666|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##NM_002711|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126451|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##BC126453|PPP1R3A|5506|protein phosphatase 1, regulatory subunit 3A##AK131266|FOXP2|93986|forkhead box P2##AF454830|FOXP2|93986|forkhead box P2	0.717204	CTCF.p2:-9:0.717
chr8	143775457	143775550	reg1032634.p1	3.930	+	NM_005672 AJ297436 AF043498 BC023582 BC048808 BC065183 CU692804 AY358912	-13597	+	TSC_hg19_v1_chr8_-_143751397 AK127631 NM_001077527 NM_003724 BX640755	-24102	-	TSC_hg19_v1_chr8_-_143751386 BC071862	-24149	-	TSC_hg19_v1_chr8_+_143781527 NM_001160354 NM_001160355 NM_017527 AJ001348	6028	+	TSC_hg19_v1_chr8_-_143808427 CR627188	32919	-	TSC_hg19_v1_chr8_+_143808691 BC001311 NM_016647 AK301564 AK315614 AF242773 BC019104 AK075407	33158	+	NM_005672|PSCA|8000|prostate stem cell antigen##AJ297436|PSCA|8000|prostate stem cell antigen##AF043498|PSCA|8000|prostate stem cell antigen##BC023582|PSCA|8000|prostate stem cell antigen##BC048808|PSCA|8000|prostate stem cell antigen##BC065183|PSCA|8000|prostate stem cell antigen##AY358912|PSCA|8000|prostate stem cell antigen##AK127631|JRK|8629|jerky homolog (mouse)##NM_001077527|JRK|8629|jerky homolog (mouse)##NM_003724|JRK|8629|jerky homolog (mouse)##BX640755|JRK|8629|jerky homolog (mouse)##BC071862|JRK|8629|jerky homolog (mouse)##NM_001160354|LY6K|54742|lymphocyte antigen 6 complex, locus K##NM_001160355|LY6K|54742|lymphocyte antigen 6 complex, locus K##NM_017527|LY6K|54742|lymphocyte antigen 6 complex, locus K##AJ001348|LY6K|54742|lymphocyte antigen 6 complex, locus K##CR627188|LOC100288181|100288181|uncharacterized LOC100288181##BC001311|C8orf55|51337|chromosome 8 open reading frame 55##NM_016647|C8orf55|51337|chromosome 8 open reading frame 55##AK315614|C8orf55|51337|chromosome 8 open reading frame 55##AF242773|C8orf55|51337|chromosome 8 open reading frame 55##BC019104|C8orf55|51337|chromosome 8 open reading frame 55##AK075407|C8orf55|51337|chromosome 8 open reading frame 55	1.009939	CTCF.p2:6:0.997
chr8	95463258	95463383	reg1031024.p1	3.930	+	AF007866 NM_001205263	-14165	-	TSC_hg19_v1_chr8_-_95274548 AK314017 BC022010 NM_005261 NM_181702	-188772	-	U10550 TSC_hg19_v1_chr8_-_95274525	-188798	-	BC001965 AF112481 BC020668 AK290437 TSC_hg19_v1_chr8_-_95487344 NM_001205262 NM_012415	23999	-	AB037850 AF116724 HQ258534 TSC_hg19_v1_chr8_-_95565696 AL832487 BC112288 BC113380 NM_015496 NM_183009	102387	-	AK057998 TSC_hg19_v1_chr8_-_95651772	188414	-	AF007866|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205263|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK314017|GEM|2669|GTP binding protein overexpressed in skeletal muscle##BC022010|GEM|2669|GTP binding protein overexpressed in skeletal muscle##NM_005261|GEM|2669|GTP binding protein overexpressed in skeletal muscle##NM_181702|GEM|2669|GTP binding protein overexpressed in skeletal muscle##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle##BC001965|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AF112481|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##BC020668|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AK290437|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_001205262|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##NM_012415|RAD54B|25788|RAD54 homolog B (S. cerevisiae)##AB037850|KIAA1429|25962|KIAA1429##AF116724|KIAA1429|25962|KIAA1429##AL832487|KIAA1429|25962|KIAA1429##BC112288|KIAA1429|25962|KIAA1429##BC113380|KIAA1429|25962|KIAA1429##NM_015496|KIAA1429|25962|KIAA1429##NM_183009|KIAA1429|25962|KIAA1429##AK057998|LOC100288748|100288748|uncharacterized LOC100288748	0.0	
chr1	2371881	2371969	reg1039180.p2	3.929	+	TSC_hg19_v1_chr1_-_2344008 AB013818 NM_002617 NM_153818	-27913	-	CR542077 DQ891961 DQ895151 TSC_hg19_v1_chr1_-_2343983 BC000543 AF060502 AK124816 BC018198	-27957	-	TSC_hg19_v1_chr1_+_2323292 AF091071	-48615	+	DQ176850 NM_014638 BC144620	35832	+	TSC_hg19_v1_chr1_-_2458040 AL442072 BC043496 AK001644 AK223546 AK303127 AK309860 NM_018216 AK295301	86139	-	BC087840 DQ272660 NM_001010926	89758	-	AB013818|PEX10|5192|peroxisomal biogenesis factor 10##NM_002617|PEX10|5192|peroxisomal biogenesis factor 10##NM_153818|PEX10|5192|peroxisomal biogenesis factor 10##CR542077|PEX10|5192|peroxisomal biogenesis factor 10##DQ891961|PEX10|5192|peroxisomal biogenesis factor 10##DQ895151|PEX10|5192|peroxisomal biogenesis factor 10##BC000543|PEX10|5192|peroxisomal biogenesis factor 10##AF060502|PEX10|5192|peroxisomal biogenesis factor 10##AK124816|PEX10|5192|peroxisomal biogenesis factor 10##BC018198|PEX10|5192|peroxisomal biogenesis factor 10##AF091071|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##DQ176850|PLCH2|9651|phospholipase C, eta 2##NM_014638|PLCH2|9651|phospholipase C, eta 2##BC144620|PLCH2|9651|phospholipase C, eta 2##AL442072|PANK4|55229|pantothenate kinase 4##BC043496|PANK4|55229|pantothenate kinase 4##AK001644|PANK4|55229|pantothenate kinase 4##AK223546|PANK4|55229|pantothenate kinase 4##AK303127|PANK4|55229|pantothenate kinase 4##AK309860|PANK4|55229|pantothenate kinase 4##NM_018216|PANK4|55229|pantothenate kinase 4##AK295301|PANK4|55229|pantothenate kinase 4##BC087840|HES5|388585|hairy and enhancer of split 5 (Drosophila)##DQ272660|HES5|388585|hairy and enhancer of split 5 (Drosophila)##NM_001010926|HES5|388585|hairy and enhancer of split 5 (Drosophila)	0.0	
chr12	4417116	4417210	reg1033181.p1	3.929	+	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	-34119	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-434663	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-554781	-	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	13228	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	71637	-	BC121097 BC121098 NM_020996 X63454	137616	-	NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23##BC121097|FGF6|2251|fibroblast growth factor 6##BC121098|FGF6|2251|fibroblast growth factor 6##NM_020996|FGF6|2251|fibroblast growth factor 6##X63454|FGF6|2251|fibroblast growth factor 6	0.984255	CTCF.p2:-8:0.984
chr14	91782265	91782401	reg1035397.p1	3.929	+	BC098567 NM_003485	-62139	-	BC128536 NM_001177676	-71482	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-201306	+	TSC_hg19_v1_chr14_-_91884159 AF070587	101815	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	101842	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	194167	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.025172	
chr15	90602886	90603064	reg1027261.p1	3.929	+	TSC_hg19_v1_chr15_+_90544707 BC020301 AK094712 NM_198526	-58286	+	AK093274 AX748027 CU691000 TSC_hg19_v1_chr15_-_90456145 AK000495 BC053602 NM_001199058 NM_182616	-146870	-	NM_005829	-165359	-	DQ892817 DQ896063 CU679271 TSC_hg19_v1_chr15_-_90645701 BC071828 BC009244 AK222916 AK299987	42687	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	42730	-	TSC_hg19_v1_chr15_-_90645713 AK312627	42752	-	BC020301|ZNF710|374655|zinc finger protein 710##AK094712|ZNF710|374655|zinc finger protein 710##NM_198526|ZNF710|374655|zinc finger protein 710##AK093274|C15orf38|348110|chromosome 15 open reading frame 38##AK000495|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##BC053602|C15orf38|348110|chromosome 15 open reading frame 38##NM_001199058|C15orf38-AP3S2|100526783|C15orf38-AP3S2 readthrough##NM_182616|C15orf38|348110|chromosome 15 open reading frame 38##NM_005829|AP3S2|10239|adaptor-related protein complex 3, sigma 2 subunit##DQ892817|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##DQ896063|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC071828|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##BC009244|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK222916|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK299987|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial	0.0	
chr17	16191093	16191273	reg1033080.p2	3.929	+	TSC_hg19_v1_chr17_+_16120523 NM_004278 AK292932 AK302523 AK296120 BC068197 AB017165 CU686621	-70677	+	BC056862 BC035748 BC142648 BC026028 AK307614 TSC_hg19_v1_chr17_-_16118849 AF044209 BC050594 BC068996 BC058511 BC107772 NM_006311	-72343	-	AB385422 AB028970 BC167431 NM_001190438 NM_001190440 AF087856 AF303586	-93265	-	TSC_hg19_v1_chr17_-_16256747 AF514992 NM_181716 BC052604	65579	-	TSC_hg19_v1_chr17_-_16256824 BC137486 BC137487	65650	-	TSC_hg19_v1_chr17_+_16284371 BC000379 NM_018955	93181	+	NM_004278|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK292932|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK302523|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK296120|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##BC068197|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AB017165|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##BC056862|NCOR1|9611|nuclear receptor corepressor 1##BC035748|NCOR1|9611|nuclear receptor corepressor 1##BC142648|NCOR1|9611|nuclear receptor corepressor 1##BC026028|NCOR1|9611|nuclear receptor corepressor 1##AK307614|NCOR1|9611|nuclear receptor corepressor 1##AF044209|NCOR1|9611|nuclear receptor corepressor 1##BC050594|NCOR1|9611|nuclear receptor corepressor 1##BC068996|NCOR1|9611|nuclear receptor corepressor 1##BC058511|NCOR1|9611|nuclear receptor corepressor 1##BC107772|NCOR1|9611|nuclear receptor corepressor 1##NM_006311|NCOR1|9611|nuclear receptor corepressor 1##AB028970|NCOR1|9611|nuclear receptor corepressor 1##BC167431|NCOR1|9611|nuclear receptor corepressor 1##NM_001190438|NCOR1|9611|nuclear receptor corepressor 1##NM_001190440|NCOR1|9611|nuclear receptor corepressor 1##AF087856|NCOR1|9611|nuclear receptor corepressor 1##AF303586|NCOR1|9611|nuclear receptor corepressor 1##AF514992|CENPV|201161|centromere protein V##NM_181716|CENPV|201161|centromere protein V##BC052604|CENPV|201161|centromere protein V##BC137486|CENPV|201161|centromere protein V##BC137487|CENPV|201161|centromere protein V##BC000379|UBB|7314|ubiquitin B##NM_018955|UBB|7314|ubiquitin B	0.0	
chr19	10450399	10450488	reg1029995.p2	3.929	+	AF340060 AF340061 AB463787 BC040123 S50015 AK309643 BC058903 X69819 TSC_hg19_v1_chr19_-_10450307 AK301071 AX746321 X69711 BC034409 BC046121 AK312826 AK226023 NM_002162	-134	-	AB075858 BC037428 TSC_hg19_v1_chr19_-_10444206 NM_133452	-6194	-	TSC_hg19_v1_chr19_-_10426678 BC063460 AB528564 BC010155 AK300568 AK097022 NM_001031734	-23756	-	TSC_hg19_v1_chr19_-_10491192 X54637 AK222672 BC014243	40748	-	TSC_hg19_v1_chr19_-_10491245 AK308360 NM_003331 AK303627 AK308379	40836	-	AB463478 AM393285 AM393349 BT006796 CR542249 DQ892174 DQ895369 U43077 TSC_hg19_v1_chr19_-_10514182	63726	-	AF340060|ICAM3|3385|intercellular adhesion molecule 3##AF340061|ICAM3|3385|intercellular adhesion molecule 3##BC040123|ICAM3|3385|intercellular adhesion molecule 3##S50015|ICAM3|3385|intercellular adhesion molecule 3##AK309643|ICAM3|3385|intercellular adhesion molecule 3##BC058903|ICAM3|3385|intercellular adhesion molecule 3##X69819|ICAM3|3385|intercellular adhesion molecule 3##AX746321|ICAM3|3385|intercellular adhesion molecule 3##X69711|ICAM3|3385|intercellular adhesion molecule 3##BC034409|ICAM3|3385|intercellular adhesion molecule 3##BC046121|ICAM3|3385|intercellular adhesion molecule 3##AK312826|ICAM3|3385|intercellular adhesion molecule 3##AK226023|ICAM3|3385|intercellular adhesion molecule 3##NM_002162|ICAM3|3385|intercellular adhesion molecule 3##AB075858|RAVER1|125950|ribonucleoprotein, PTB-binding 1##BC037428|RAVER1|125950|ribonucleoprotein, PTB-binding 1##NM_133452|RAVER1|125950|ribonucleoprotein, PTB-binding 1##BC063460|FDX1L|112812|ferredoxin 1-like##BC010155|FDX1L|112812|ferredoxin 1-like##AK300568|FDX1L|112812|ferredoxin 1-like##NM_001031734|FDX1L|112812|ferredoxin 1-like##X54637|TYK2|7297|tyrosine kinase 2##AK222672|TYK2|7297|tyrosine kinase 2##BC014243|TYK2|7297|tyrosine kinase 2##AK308360|TYK2|7297|tyrosine kinase 2##NM_003331|TYK2|7297|tyrosine kinase 2##AK303627|TYK2|7297|tyrosine kinase 2##AK308379|TYK2|7297|tyrosine kinase 2##AM393285|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AM393349|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##BT006796|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##CR542249|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ892174|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##DQ895369|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##U43077|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)	0.0	
chr20	19194567	19194636	reg1045412.p1	3.929	+	TSC_hg19_v1_chr20_+_19193372 AB587438 AF169257	-1148	+	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	-1316	+	NM_001242671	-383763	-	TSC_hg19_v1_chr20_+_19867169 AK094884 NM_001242581	672542	+	BC128065 NM_018993 TSC_hg19_v1_chr20_+_19870217 AB060339	675626	+	TSC_hg19_v1_chr20_+_19915762 BC034698 AL136924	721148	+	AF169257|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AK094884|RIN2|54453|Ras and Rab interactor 2##NM_001242581|RIN2|54453|Ras and Rab interactor 2##BC128065|RIN2|54453|Ras and Rab interactor 2##NM_018993|RIN2|54453|Ras and Rab interactor 2##AB060339|RIN2|54453|Ras and Rab interactor 2##BC034698|RIN2|54453|Ras and Rab interactor 2##AL136924|RIN2|54453|Ras and Rab interactor 2	0.0	
chr2	198380423	198380604	reg1030891.p1	3.929	+	NM_199482 AK289377 AF250319	-207	+	TSC_hg19_v1_chr2_+_198365132 U07550 AK312104 AK128843	-15387	+	TSC_hg19_v1_chr2_+_198365102 BC023518	-15455	+	TSC_hg19_v1_chr2_+_198380776 BC005237 NM_001100819 NM_015387 AK027043 AK292938	255	+	AF093825 AF151853 TSC_hg19_v1_chr2_+_198380804 AK307497 AL080070 AB015441 AK297294 AK297514 AB590538 AJ580638 CR457371	301	+	NM_001204094	508	+	NM_199482|MOB4|25843|MOB family member 4, phocein##AK289377|MOB4|25843|MOB family member 4, phocein##AF250319|MOB4|25843|MOB family member 4, phocein##U07550|HSPE1|3336|heat shock 10kDa protein 1 (chaperonin 10)##AK312104|HSPE1|3336|heat shock 10kDa protein 1 (chaperonin 10)##BC023518|HSPE1|3336|heat shock 10kDa protein 1 (chaperonin 10)##BC005237|MOB4|25843|MOB family member 4, phocein##NM_001100819|MOB4|25843|MOB family member 4, phocein##NM_015387|MOB4|25843|MOB family member 4, phocein##AK027043|MOB4|25843|MOB family member 4, phocein##AK292938|MOB4|25843|MOB family member 4, phocein##AF093825|MOB4|25843|MOB family member 4, phocein##AF151853|MOB4|25843|MOB family member 4, phocein##AK307497|MOB4|25843|MOB family member 4, phocein##AL080070|MOB4|25843|MOB family member 4, phocein##AB015441|MOB4|25843|MOB family member 4, phocein##AK297514|MOB4|25843|MOB family member 4, phocein##AJ580638|MOB4|25843|MOB family member 4, phocein##CR457371|MOB4|25843|MOB family member 4, phocein##NM_001204094|MOB4|25843|MOB family member 4, phocein	0.0	
chr3	45266787	45266867	reg1030847.p1	3.929	+	TSC_hg19_v1_chr3_-_45187900 BC021099 NM_022842 NM_178181	-78913	-	TSC_hg19_v1_chr3_-_45187871 BC069254 AY167484 AY358779 AK314441 AF468010 AK026622	-78952	-	TSC_hg19_v1_chr3_-_45187849 AY375452 AY026461	-78976	-	AL080235 TSC_hg19_v1_chr3_-_45267132	273	-	AB078417 AF438313 TSC_hg19_v1_chr3_-_45267780 BC057390	881	-	TSC_hg19_v1_chr3_-_45267804 NM_015444	998	-	BC021099|CDCP1|64866|CUB domain containing protein 1##NM_022842|CDCP1|64866|CUB domain containing protein 1##NM_178181|CDCP1|64866|CUB domain containing protein 1##BC069254|CDCP1|64866|CUB domain containing protein 1##AY167484|CDCP1|64866|CUB domain containing protein 1##AY358779|CDCP1|64866|CUB domain containing protein 1##AK314441|CDCP1|64866|CUB domain containing protein 1##AF468010|CDCP1|64866|CUB domain containing protein 1##AK026622|CDCP1|64866|CUB domain containing protein 1##AY375452|CDCP1|64866|CUB domain containing protein 1##AY026461|CDCP1|64866|CUB domain containing protein 1##AL080235|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AB078417|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##AF438313|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##BC057390|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)##NM_015444|TMEM158|25907|transmembrane protein 158 (gene/pseudogene)	0.913349	CTCF.p2:-30:0.913
chr5	171197223	171197376	reg1032770.p2	3.929	+	BC006245 TSC_hg19_v1_chr5_+_170847089 AB007422 AB528345 AF211188 AM393798 BT019570 BT019571 DQ892736 DQ895983	-350168	+	AY358811 AF075292 NM_003862	-350637	+	AB042278 AB451236 AB451361 AB463949 BT007011 CU676967 CU677717 CU680364 CU692436 DQ892032 DQ895223 EF429251 X16934 TSC_hg19_v1_chr5_+_170815031	-382308	+	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	236229	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	236345	-	BC026213 NM_012300 NM_033644 NM_033645	236577	-	BC006245|FGF18|8817|fibroblast growth factor 18##AB007422|FGF18|8817|fibroblast growth factor 18##AF211188|FGF18|8817|fibroblast growth factor 18##AM393798|FGF18|8817|fibroblast growth factor 18##BT019570|FGF18|8817|fibroblast growth factor 18##BT019571|FGF18|8817|fibroblast growth factor 18##DQ892736|FGF18|8817|fibroblast growth factor 18##DQ895983|FGF18|8817|fibroblast growth factor 18##AY358811|FGF18|8817|fibroblast growth factor 18##AF075292|FGF18|8817|fibroblast growth factor 18##NM_003862|FGF18|8817|fibroblast growth factor 18##AB042278|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451236|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451361|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BT007011|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ892032|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ895223|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##EF429251|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##X16934|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11	0.010968	
chr8	99952488	99952601	reg1003837.p1	3.929	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	-114697	-	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	-513198	+	BC132687 BC144055 TSC_hg19_v1_chr8_-_99306600 AK024017 NM_024759	-645945	-	NM_001142462 NM_053001 TSC_hg19_v1_chr8_+_99956669 AK074518 AK291491 AK310994 BC016936 AY038073	4113	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	72951	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	72968	+	U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3##BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC132687|NIPAL2|79815|NIPA-like domain containing 2##BC144055|NIPAL2|79815|NIPA-like domain containing 2##AK024017|NIPAL2|79815|NIPA-like domain containing 2##NM_024759|NIPAL2|79815|NIPA-like domain containing 2##NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)##NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)##AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)##AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)##AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)##BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)##AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)	0.0	
chr10	10973349	10973474	reg1032084.p1	3.928	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-2875928	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-2876636	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-2876762	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	73846	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	73874	+	AK299548 TSC_hg19_v1_chr10_+_11047339	73929	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.0	CTCF.p2:108:0.993
chr10	97543727	97543845	reg1034798.p1	3.928	+	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	-28246	+	AJ133133 AJ133134 NM_001098175	-72251	+	BC068449 DQ278872 NM_001143973 NM_015631	-89887	-	AK294399 NM_001130446	123935	+	NM_001001732 NM_001159747 AK302377 BC075861	216078	+	TSC_hg19_v1_chr10_+_97803318 BC043175 NM_001134375 NM_001134376 NM_019084 AK092360 AK297264 AX747499	259595	+	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##BC068449|TCTN3|26123|tectonic family member 3##DQ278872|TCTN3|26123|tectonic family member 3##NM_001143973|TCTN3|26123|tectonic family member 3##NM_015631|TCTN3|26123|tectonic family member 3##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B##NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC043175|CCNJ|54619|cyclin J##NM_001134375|CCNJ|54619|cyclin J##NM_001134376|CCNJ|54619|cyclin J##NM_019084|CCNJ|54619|cyclin J##AK092360|CCNJ|54619|cyclin J##AK297264|CCNJ|54619|cyclin J	0.0	
chr11	116969335	116969439	reg1032959.p1	3.928	+	BC128511 BC128510 NM_025164 BC121188 TSC_hg19_v1_chr11_-_116969081	-354	-	X00566 TSC_hg19_v1_chr11_-_116708339 AX752114 AX752116 BC005380 NM_000039 AK292231 BC110286	-261032	-	TSC_hg19_v1_chr11_+_116700622 BC121081 BC134419 NM_000040 BC027977	-268763	+	TSC_hg19_v1_chr11_+_117015002 NM_001184746 NM_001184747 NM_001184748 NM_002572 AK292973 AK307366 BC000398 BC019301 BC039721 D63390 BC001774 DQ836738 DQ836739 DQ836740 DQ836741 DQ836742 DQ836743	45646	+	TSC_hg19_v1_chr11_+_117049458 AK292501	80170	+	TSC_hg19_v1_chr11_+_117049872 AF151799 BC114522 BC114959 AY358442 NM_001040455 AK292974	80505	+	BC128511|SIK3|23387|SIK family kinase 3##BC128510|SIK3|23387|SIK family kinase 3##NM_025164|SIK3|23387|SIK family kinase 3##BC121188|SIK3|23387|SIK family kinase 3##X00566|APOA1|335|apolipoprotein A-I##BC005380|APOA1|335|apolipoprotein A-I##NM_000039|APOA1|335|apolipoprotein A-I##AK292231|APOA1|335|apolipoprotein A-I##BC110286|APOA1|335|apolipoprotein A-I##BC121081|APOC3|345|apolipoprotein C-III##BC134419|APOC3|345|apolipoprotein C-III##NM_000040|APOC3|345|apolipoprotein C-III##BC027977|APOC3|345|apolipoprotein C-III##NM_001184746|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184747|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184748|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_002572|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292973|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK307366|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC000398|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC019301|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC039721|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##D63390|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC001774|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836738|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836739|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836740|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836741|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836742|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836743|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292501|SIDT2|51092|SID1 transmembrane family, member 2##AF151799|SIDT2|51092|SID1 transmembrane family, member 2##BC114522|SIDT2|51092|SID1 transmembrane family, member 2##BC114959|SIDT2|51092|SID1 transmembrane family, member 2##AY358442|SIDT2|51092|SID1 transmembrane family, member 2##NM_001040455|SIDT2|51092|SID1 transmembrane family, member 2##AK292974|SIDT2|51092|SID1 transmembrane family, member 2	0.136405	
chr1	15247618	15247720	reg1033844.p2	3.928	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	-322475	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-1171728	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-1171746	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	3050	+	AY505121 NM_001018001	8626	+	AY505122 NM_001017999	24745	+	AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein##AY505122|KAZN|23254|kazrin, periplakin interacting protein##NM_001017999|KAZN|23254|kazrin, periplakin interacting protein	0.845703	CTCF.p2:-42:0.846
chr1	22069226	22069343	reg1037307.p1	3.928	+	AB007943 M64788 TSC_hg19_v1_chr1_-_21995851 NM_001145657 NM_002885	-73451	-	BC054490 TSC_hg19_v1_chr1_-_21978334 NM_001145658	-90937	-	AB003930 TSC_hg19_v1_chr1_-_21949064	-120247	-	CU679968 AB384973 AK315005 BC104896 BC143343 BC143349 BC143354 TSC_hg19_v1_chr1_-_22109586 AK074247 AF502942 BC011576	40241	-	TSC_hg19_v1_chr1_-_22109643 BC103724 BC067261	40350	-	TSC_hg19_v1_chr1_-_22109701 AK026930 NM_001032730 NM_032236	40415	-	AB007943|RAP1GAP|5909|RAP1 GTPase activating protein##M64788|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145657|RAP1GAP|5909|RAP1 GTPase activating protein##NM_002885|RAP1GAP|5909|RAP1 GTPase activating protein##BC054490|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145658|RAP1GAP|5909|RAP1 GTPase activating protein##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein##AK315005|USP48|84196|ubiquitin specific peptidase 48##BC104896|USP48|84196|ubiquitin specific peptidase 48##BC143343|USP48|84196|ubiquitin specific peptidase 48##BC143349|USP48|84196|ubiquitin specific peptidase 48##BC143354|USP48|84196|ubiquitin specific peptidase 48##AK074247|USP48|84196|ubiquitin specific peptidase 48##AF502942|USP48|84196|ubiquitin specific peptidase 48##BC011576|USP48|84196|ubiquitin specific peptidase 48##BC103724|USP48|84196|ubiquitin specific peptidase 48##BC067261|USP48|84196|ubiquitin specific peptidase 48##NM_001032730|USP48|84196|ubiquitin specific peptidase 48##NM_032236|USP48|84196|ubiquitin specific peptidase 48	0.023125	
chr16	31519608	31519788	reg1032048.p1	3.928	+	TSC_hg19_v1_chr16_-_31519698 BC054514 BC009308 AK222913 AK296166 AK296491 AK304608 AK023930 NM_022744	-31	-	BC000822 TSC_hg19_v1_chr16_-_31505257	-14446	-	BC131542 M95549 NM_003041	-25260	+	NM_016633 AF147435 AF208865 AF364517 BC035842	19518	+	TSC_hg19_v1_chr16_+_31711914 AK054698	192218	+	TSC_hg19_v1_chr16_+_31711931 BC021555 BC000552	192242	+	BC009308|C16orf58|64755|chromosome 16 open reading frame 58##AK222913|C16orf58|64755|chromosome 16 open reading frame 58##AK296166|C16orf58|64755|chromosome 16 open reading frame 58##AK296491|C16orf58|64755|chromosome 16 open reading frame 58##AK304608|C16orf58|64755|chromosome 16 open reading frame 58##AK023930|C16orf58|64755|chromosome 16 open reading frame 58##NM_022744|C16orf58|64755|chromosome 16 open reading frame 58##BC000822|C16orf58|64755|chromosome 16 open reading frame 58##BC131542|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2##M95549|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2##NM_003041|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2##NM_016633|AHSP|51327|alpha hemoglobin stabilizing protein##AF147435|AHSP|51327|alpha hemoglobin stabilizing protein##AF208865|AHSP|51327|alpha hemoglobin stabilizing protein##AF364517|AHSP|51327|alpha hemoglobin stabilizing protein##BC035842|AHSP|51327|alpha hemoglobin stabilizing protein##AK054698|KIAA0664L3|100132341|KIAA0664-like 3##BC021555|KIAA0664L3|100132341|KIAA0664-like 3##BC000552|KIAA0664L3|100132341|KIAA0664-like 3	0.0	
chr20	47937041	47937150	reg1031215.p1	3.928	+	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-41900	+	TSC_hg19_v1_chr20_+_47895176 BC042807 CR936805	-41923	+	TSC_hg19_v1_chr20_-_47894629 BC030789 NM_021035	-42422	-	BC110572 BC110573 NM_004975	162084	-	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	247594	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	393135	-	BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC042807|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##CR936805|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC030789|ZNFX1|57169|zinc finger, NFX1-type containing 1##NM_021035|ZNFX1|57169|zinc finger, NFX1-type containing 1##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.172	
chr2	20832915	20833095	reg1035200.p1	3.928	+	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-186173	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-282586	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-305872	-	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	17843	-	AF522369 NM_182828	33418	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	189848	-	AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43	0.0	
chr4	15459110	15459207	reg1011653.p1	3.928	+	NM_031911 AF329839	-29511	+	NM_001135171	-82984	+	BX647781 NM_001135170 AK314802 BC022187 BC024015	-117573	+	NM_001080522 NM_001164720 NM_020785 AK096047 AK309178 BX647334 BC061921 BC053865 BC070395 EU450799	12416	+	TSC_hg19_v1_chr4_+_15480833 AB037766 BC103710	21691	+	AF157323 AM392665 AM393475 CU688970 DQ892452 DQ895664 AF176700 AF199420 TSC_hg19_v1_chr4_-_15656935	197757	-	NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135171|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001080522|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_001164720|CC2D2A|57545|coiled-coil and C2 domain containing 2A##NM_020785|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AK096047|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AK309178|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BX647334|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC061921|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC053865|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC070395|CC2D2A|57545|coiled-coil and C2 domain containing 2A##EU450799|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AB037766|CC2D2A|57545|coiled-coil and C2 domain containing 2A##BC103710|CC2D2A|57545|coiled-coil and C2 domain containing 2A##AF157323|FBXL5|26234|F-box and leucine-rich repeat protein 5##AM392665|FBXL5|26234|F-box and leucine-rich repeat protein 5##AM393475|FBXL5|26234|F-box and leucine-rich repeat protein 5##DQ892452|FBXL5|26234|F-box and leucine-rich repeat protein 5##DQ895664|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF176700|FBXL5|26234|F-box and leucine-rich repeat protein 5##AF199420|FBXL5|26234|F-box and leucine-rich repeat protein 5	0.0	
chr4	185203648	185203722	reg1036489.p2	3.928	+	BC035035 AY358676 AK057370 NM_153343	-64620	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-375774	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-375865	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	191996	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	366916	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	367148	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.037285	
chr5	141081429	141081571	reg1010368.p1	3.928	+	TSC_hg19_v1_chr5_-_141061801 NM_022481	-19683	-	AJ310567 TSC_hg19_v1_chr5_-_141061794 AK091385 AX746950 AK290052	-19728	-	TSC_hg19_v1_chr5_-_141030986 AY217346 NM_033449	-50517	-	CU690208 TSC_hg19_v1_chr5_-_141257848	176339	-	BC035812 NM_002587 NM_032420 BC051287 BC075821 TSC_hg19_v1_chr5_-_141257976 AK289512	176459	-	TSC_hg19_v1_chr5_+_141303403 NM_001142603 NM_014773 BC007855 D50931 AK292869	221909	+	NM_022481|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AJ310567|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK091385|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK290052|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AY217346|FCHSD1|89848|FCH and double SH3 domains 1##NM_033449|FCHSD1|89848|FCH and double SH3 domains 1##BC035812|PCDH1|5097|protocadherin 1##NM_002587|PCDH1|5097|protocadherin 1##NM_032420|PCDH1|5097|protocadherin 1##BC051287|PCDH1|5097|protocadherin 1##BC075821|PCDH1|5097|protocadherin 1##AK289512|PCDH1|5097|protocadherin 1##NM_001142603|KIAA0141|9812|KIAA0141##NM_014773|KIAA0141|9812|KIAA0141##BC007855|KIAA0141|9812|KIAA0141##D50931|KIAA0141|9812|KIAA0141##AK292869|KIAA0141|9812|KIAA0141	0.0	
chr6	53659159	53659338	reg1038472.p1	3.928	+	EF633513 NM_001003760	-128743	-	TSC_hg19_v1_chr6_-_53409900 AK304288 NM_001197115 NM_001498	-249337	-	TSC_hg19_v1_chr6_-_53409836 AK313480	-249413	-	TSC_hg19_v1_chr6_+_53659294 AK021896	52	+	TSC_hg19_v1_chr6_+_53659776 BC003193 NM_018214	511	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	683	+	EF633513|KLHL31|401265|kelch-like 31 (Drosophila)##NM_001003760|KLHL31|401265|kelch-like 31 (Drosophila)##AK304288|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001197115|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001498|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK313480|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK021896|LRRC1|55227|leucine rich repeat containing 1##BC003193|LRRC1|55227|leucine rich repeat containing 1##NM_018214|LRRC1|55227|leucine rich repeat containing 1##AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1	0.014216	
chr9	34899850	34899999	reg1004555.p2	3.928	+	AK301951 AK302320 NM_001141917	-170426	-	AF001979 CR450326 AB463486 DQ892048 DQ895242 AY358887 U88320 BC027918 AB002409 AK311901 TSC_hg19_v1_chr9_-_34710134 NM_002989	-189820	-	CR456868 U77180 AB590424 DQ895236 EU176240 U88321 BC027968 AK311945 AX772806 AB000887 NM_006274	-208720	-	TSC_hg19_v1_chr9_+_34958175 BC041169 NM_015297	58257	+	AB028968 TSC_hg19_v1_chr9_+_34958324	58399	+	NM_001135004 NM_012266 TSC_hg19_v1_chr9_+_34989739 AK023253 BC012115 AK314671 AF087870	89793	+	AK302320|FAM205A|259308|family with sequence similarity 205, member A##NM_001141917|FAM205A|259308|family with sequence similarity 205, member A##AF001979|CCL21|6366|chemokine (C-C motif) ligand 21##CR450326|CCL21|6366|chemokine (C-C motif) ligand 21##DQ892048|CCL21|6366|chemokine (C-C motif) ligand 21##DQ895242|CCL21|6366|chemokine (C-C motif) ligand 21##AY358887|CCL21|6366|chemokine (C-C motif) ligand 21##U88320|CCL21|6366|chemokine (C-C motif) ligand 21##BC027918|CCL21|6366|chemokine (C-C motif) ligand 21##AB002409|CCL21|6366|chemokine (C-C motif) ligand 21##AK311901|CCL21|6366|chemokine (C-C motif) ligand 21##NM_002989|CCL21|6366|chemokine (C-C motif) ligand 21##CR456868|CCL19|6363|chemokine (C-C motif) ligand 19##U77180|CCL19|6363|chemokine (C-C motif) ligand 19##DQ895236|CCL19|6363|chemokine (C-C motif) ligand 19##EU176240|CCL19|6363|chemokine (C-C motif) ligand 19##U88321|CCL19|6363|chemokine (C-C motif) ligand 19##BC027968|CCL19|6363|chemokine (C-C motif) ligand 19##AK311945|CCL19|6363|chemokine (C-C motif) ligand 19##AX772806|CCL19|6363|chemokine (C-C motif) ligand 19##AB000887|CCL19|6363|chemokine (C-C motif) ligand 19##NM_006274|CCL19|6363|chemokine (C-C motif) ligand 19##BC041169|KIAA1045|23349|KIAA1045##NM_015297|KIAA1045|23349|KIAA1045##AB028968|KIAA1045|23349|KIAA1045##NM_001135004|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##NM_012266|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK023253|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK314671|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AF087870|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5	0.0	
chr1	24243166	24243303	reg1003219.p1	3.927	+	BC069722 NM_001841 X74328 FJ357036	-3430	-	CU675950 TSC_hg19_v1_chr1_-_24194781 M29877 AB074175 AK092914 AK095443 AK095455 AK225468 AK301302 AK310143 AK314649 AX747804 BC017338 AK295535 NM_000147	-48425	-	TSC_hg19_v1_chr1_-_24151934 NM_000191 NM_001166059	-91286	-	NM_017761 TSC_hg19_v1_chr1_+_24286310	43071	+	TSC_hg19_v1_chr1_+_24286317 AF151042 AK300522 BC068475 AK311305 BC001959 BC085018 BC078177 AF374386	43112	+	TSC_hg19_v1_chr1_-_24306818 AF449427 CU674556 AB528881 AY150180 AY150181 AF047448 AF067730 AY007101 BC010074 BC005039 AK001286 AK001656 BC071575 AF419331	63549	-	BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)##NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)##X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)##M29877|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AB074175|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK092914|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095443|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095455|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK225468|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK301302|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK310143|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK314649|FUCA1|2517|fucosidase, alpha-L- 1, tissue##BC017338|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK295535|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000147|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000191|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_001166059|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF449427|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150180|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150181|SRSF10|10772|serine/arginine-rich splicing factor 10##AF047448|SRSF10|10772|serine/arginine-rich splicing factor 10##AF067730|SRSF10|10772|serine/arginine-rich splicing factor 10##AY007101|SRSF10|10772|serine/arginine-rich splicing factor 10##BC010074|SRSF10|10772|serine/arginine-rich splicing factor 10##BC005039|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001286|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001656|SRSF10|10772|serine/arginine-rich splicing factor 10##BC071575|SRSF10|10772|serine/arginine-rich splicing factor 10##AF419331|SRSF10|10772|serine/arginine-rich splicing factor 10	0.0	
chr14	103383094	103383246	reg1003159.p1	3.927	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	-139270	+	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	-139351	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-324009	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	5828	+	TSC_hg19_v1_chr14_-_103430941 BX248752	47788	-	AB384568 TSC_hg19_v1_chr14_-_103523568	140371	-	AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AF155595|RCOR1|23186|REST corepressor 1##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)##BX248752|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)	0.0	
chr16	19695029	19695147	reg1033982.p2	3.927	+	TSC_hg19_v1_chr16_+_19567045 BX537867 AK095078 AK290286 AL832159 BC058845 AL833428 EU831926 EU832021	-128052	+	AK294885 NM_020314	-128352	+	NM_001199022 NM_014711 TSC_hg19_v1_chr16_+_19535277 BC036654 AK300426 AB007879 CR749255 BC030223	-159857	+	TSC_hg19_v1_chr16_+_19727698 AF520569 AF520570 AK000122 NM_153208	32649	+	TSC_hg19_v1_chr16_-_19729532 BC117562 NM_001012991	34399	-	AK295204 AF202640 TSC_hg19_v1_chr16_-_19896168 BC034467 AF181862 NM_016235 AK294680 AK075119 AK315989 AK296754	201076	-	BX537867|C16orf62|57020|chromosome 16 open reading frame 62##AK095078|C16orf62|57020|chromosome 16 open reading frame 62##AK290286|C16orf62|57020|chromosome 16 open reading frame 62##AL832159|C16orf62|57020|chromosome 16 open reading frame 62##BC058845|C16orf62|57020|chromosome 16 open reading frame 62##AL833428|C16orf62|57020|chromosome 16 open reading frame 62##EU831926|C16orf62|57020|chromosome 16 open reading frame 62##EU832021|C16orf62|57020|chromosome 16 open reading frame 62##AK294885|C16orf62|57020|chromosome 16 open reading frame 62##NM_020314|C16orf62|57020|chromosome 16 open reading frame 62##NM_001199022|CCP110|9738|centriolar coiled coil protein 110kDa##NM_014711|CCP110|9738|centriolar coiled coil protein 110kDa##BC036654|CCP110|9738|centriolar coiled coil protein 110kDa##AK300426|CCP110|9738|centriolar coiled coil protein 110kDa##AB007879|CCP110|9738|centriolar coiled coil protein 110kDa##CR749255|CCP110|9738|centriolar coiled coil protein 110kDa##BC030223|CCP110|9738|centriolar coiled coil protein 110kDa##AF520569|IQCK|124152|IQ motif containing K##AF520570|IQCK|124152|IQ motif containing K##AK000122|IQCK|124152|IQ motif containing K##NM_153208|IQCK|124152|IQ motif containing K##BC117562|C16orf88|400506|chromosome 16 open reading frame 88##NM_001012991|C16orf88|400506|chromosome 16 open reading frame 88##AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B	0.0	
chr1	6231737	6231823	reg1031176.p2	3.927	+	AK315858 NM_001199863	-125607	+	AK131252 NM_001199862	-125800	+	AK124696 NM_001199860	-137436	+	AK127046 AB527126 AF425231 NM_015557 TSC_hg19_v1_chr1_-_6240331	8427	-	TSC_hg19_v1_chr1_-_6259655 CR456873 BC046108 BC058887 AK097075 AK311749 D17652 BC066314 BC035566 NM_000983	27873	-	BC119780 TSC_hg19_v1_chr1_+_6266175 NM_207396	34384	+	AK315858|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199863|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK131252|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199862|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK124696|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199860|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK127046|CHD5|26038|chromodomain helicase DNA binding protein 5##AF425231|CHD5|26038|chromodomain helicase DNA binding protein 5##NM_015557|CHD5|26038|chromodomain helicase DNA binding protein 5##CR456873|RPL22|6146|ribosomal protein L22##BC058887|RPL22|6146|ribosomal protein L22##AK097075|RPL22|6146|ribosomal protein L22##AK311749|RPL22|6146|ribosomal protein L22##D17652|RPL22|6146|ribosomal protein L22##BC066314|RPL22|6146|ribosomal protein L22##BC035566|RPL22|6146|ribosomal protein L22##NM_000983|RPL22|6146|ribosomal protein L22##BC119780|RNF207|388591|ring finger protein 207##NM_207396|RNF207|388591|ring finger protein 207	0.986106	CTCF.p2:-7:0.986
chr16	81814225	81814292	reg1034138.p2	3.927	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-1328	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-1356	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	-1361	+	BC019670 AK315652 AK026740 NM_145168	230810	-	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	254603	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	254674	+	BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.0	
chr16	89724645	89724717	reg1023759.p2	3.927	+	TSC_hg19_v1_chr16_+_89724475 AK125673	-211	+	TSC_hg19_v1_chr16_+_89724243 AK056168 BC148299 NM_153025 AK128803 AK303024 BC045670	-445	+	TSC_hg19_v1_chr16_-_89724128 NM_001083314 NM_002768 U58048	-492	-	TSC_hg19_v1_chr16_+_89753087 AK298386 NM_001098533 NM_001160367 NM_052987 NM_052988 AK075036 L33264 AK295397	28398	+	TSC_hg19_v1_chr16_+_89753098 AB209829 BC017342 AK292351 BC093028 AK296631 AK290485 AF153430 AK312016 BC025301 BC032704	28428	+	TSC_hg19_v1_chr16_-_89768114 BC039608 BC053588 BC027606 NM_152339	43438	-	AK125673|C16orf55|124045|chromosome 16 open reading frame 55##AK056168|C16orf55|124045|chromosome 16 open reading frame 55##BC148299|C16orf55|124045|chromosome 16 open reading frame 55##NM_153025|C16orf55|124045|chromosome 16 open reading frame 55##AK128803|C16orf55|124045|chromosome 16 open reading frame 55##AK303024|C16orf55|124045|chromosome 16 open reading frame 55##BC045670|C16orf55|124045|chromosome 16 open reading frame 55##NM_001083314|CHMP1A|5119|charged multivesicular body protein 1A##NM_002768|CHMP1A|5119|charged multivesicular body protein 1A##U58048|CHMP1A|5119|charged multivesicular body protein 1A##AK298386|CDK10|8558|cyclin-dependent kinase 10##NM_001098533|CDK10|8558|cyclin-dependent kinase 10##NM_001160367|CDK10|8558|cyclin-dependent kinase 10##NM_052987|CDK10|8558|cyclin-dependent kinase 10##NM_052988|CDK10|8558|cyclin-dependent kinase 10##AK075036|CDK10|8558|cyclin-dependent kinase 10##L33264|CDK10|8558|cyclin-dependent kinase 10##AK295397|CDK10|8558|cyclin-dependent kinase 10##AB209829|CDK10|8558|cyclin-dependent kinase 10##BC017342|CDK10|8558|cyclin-dependent kinase 10##AK292351|CDK10|8558|cyclin-dependent kinase 10##BC093028|CDK10|8558|cyclin-dependent kinase 10##AK296631|CDK10|8558|cyclin-dependent kinase 10##AK290485|CDK10|8558|cyclin-dependent kinase 10##AF153430|CDK10|8558|cyclin-dependent kinase 10##AK312016|CDK10|8558|cyclin-dependent kinase 10##BC025301|CDK10|8558|cyclin-dependent kinase 10##BC032704|CDK10|8558|cyclin-dependent kinase 10##BC039608|SPATA2L|124044|spermatogenesis associated 2-like##BC053588|SPATA2L|124044|spermatogenesis associated 2-like##BC027606|SPATA2L|124044|spermatogenesis associated 2-like##NM_152339|SPATA2L|124044|spermatogenesis associated 2-like	0.0	
chr17	47815082	47815246	reg1041949.p1	3.927	+	BX641166 TSC_hg19_v1_chr17_-_47785555	-29614	-	TSC_hg19_v1_chr17_-_47785283 AK296073 D87989 NM_005827 BC011888 AK293563	-29866	-	AK098056 CU680094 DQ893425 EU176812 TSC_hg19_v1_chr17_-_47785254	-29971	-	AF123073 BC065199 TSC_hg19_v1_chr17_-_47841483	26315	-	NM_030802 BC037572 TSC_hg19_v1_chr17_-_47841551	26382	-	NM_001199155 NM_001199156 NM_001199157 NM_001199158 NM_007067 TSC_hg19_v1_chr17_+_47866042 AK293976 AK294014 AK023890 AK294052 AK294836 AF140360	50854	+	BX641166|SLC35B1|10237|solute carrier family 35, member B1##AK296073|SLC35B1|10237|solute carrier family 35, member B1##D87989|SLC35B1|10237|solute carrier family 35, member B1##NM_005827|SLC35B1|10237|solute carrier family 35, member B1##BC011888|SLC35B1|10237|solute carrier family 35, member B1##AK293563|SLC35B1|10237|solute carrier family 35, member B1##AK098056|SLC35B1|10237|solute carrier family 35, member B1##DQ893425|SLC35B1|10237|solute carrier family 35, member B1##EU176812|SLC35B1|10237|solute carrier family 35, member B1##AF123073|FAM117A|81558|family with sequence similarity 117, member A##BC065199|FAM117A|81558|family with sequence similarity 117, member A##NM_030802|FAM117A|81558|family with sequence similarity 117, member A##BC037572|FAM117A|81558|family with sequence similarity 117, member A##NM_001199155|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199156|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199157|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199158|KAT7|11143|K(lysine) acetyltransferase 7##NM_007067|KAT7|11143|K(lysine) acetyltransferase 7##AK293976|KAT7|11143|K(lysine) acetyltransferase 7##AK294014|KAT7|11143|K(lysine) acetyltransferase 7##AK023890|KAT7|11143|K(lysine) acetyltransferase 7##AK294052|KAT7|11143|K(lysine) acetyltransferase 7##AK294836|KAT7|11143|K(lysine) acetyltransferase 7##AF140360|KAT7|11143|K(lysine) acetyltransferase 7	0.0	
chr19	37602773	37602915	reg1038503.p1	3.927	+	TSC_hg19_v1_chr19_+_37569355 AK315728 AK056753 BC026210 NM_144689	-33500	+	NM_001204835 NM_001204836 NM_001204837 NM_001204838 NM_001204839 NM_198539 BC016334 BC031218 BX640681 TSC_hg19_v1_chr19_+_37407267 BC108696 AK299626 AK093123 AX747939 BC131547 BC111777	-195505	+	BC107131 BC107132 TSC_hg19_v1_chr19_-_37407194 CR936826 NM_001037232	-195696	-	NM_199126 BC052956	60490	-	AF086428 BC063820 TSC_hg19_v1_chr19_-_37663623 AK056389 NM_152655 AK290660 BC026081	60753	-	BC051277 BC067088 BC080550 TSC_hg19_v1_chr19_-_37701446 AY147015 NM_152279	98573	-	AK315728|ZNF420|147923|zinc finger protein 420##AK056753|ZNF420|147923|zinc finger protein 420##BC026210|ZNF420|147923|zinc finger protein 420##NM_144689|ZNF420|147923|zinc finger protein 420##NM_001204835|ZNF568|374900|zinc finger protein 568##NM_001204836|ZNF568|374900|zinc finger protein 568##NM_001204837|ZNF568|374900|zinc finger protein 568##NM_001204838|ZNF568|374900|zinc finger protein 568##NM_001204839|ZNF568|374900|zinc finger protein 568##NM_198539|ZNF568|374900|zinc finger protein 568##BC016334|ZNF568|374900|zinc finger protein 568##BC031218|ZNF568|374900|zinc finger protein 568##BX640681|ZNF568|374900|zinc finger protein 568##BC108696|ZNF568|374900|zinc finger protein 568##AK299626|ZNF568|374900|zinc finger protein 568##AK093123|ZNF568|374900|zinc finger protein 568##BC131547|ZNF568|374900|zinc finger protein 568##BC111777|ZNF568|374900|zinc finger protein 568##BC107131|ZNF829|374899|zinc finger protein 829##BC107132|ZNF829|374899|zinc finger protein 829##CR936826|ZNF829|374899|zinc finger protein 829##NM_001037232|ZNF829|374899|zinc finger protein 829##NM_199126|ZNF585A|199704|zinc finger protein 585A##BC052956|ZNF585A|199704|zinc finger protein 585A##AF086428|ZNF585A|199704|zinc finger protein 585A##BC063820|ZNF585A|199704|zinc finger protein 585A##AK056389|ZNF585A|199704|zinc finger protein 585A##NM_152655|ZNF585A|199704|zinc finger protein 585A##AK290660|ZNF585A|199704|zinc finger protein 585A##BC026081|ZNF585A|199704|zinc finger protein 585A##BC051277|ZNF585B|92285|zinc finger protein 585B##BC067088|ZNF585B|92285|zinc finger protein 585B##BC080550|ZNF585B|92285|zinc finger protein 585B##AY147015|ZNF585B|92285|zinc finger protein 585B##NM_152279|ZNF585B|92285|zinc finger protein 585B	0.291276	CTCF.p2:9:0.291
chr19	55591813	55591900	reg1037070.p2	3.927	+	AK000265 AK301615 NM_017729 BC015763 CU677435	-47	+	AK309305 NM_133180 AF370395 AK075098 AK296732	-4611	+	BC009881 NM_138412	-10952	-	AB209452 TSC_hg19_v1_chr19_-_55629006 AF312028 NM_017607	37076	-	TSC_hg19_v1_chr19_-_55658311 AY762903 AY762904 BT019630 S51938	66561	-	S69208 S69209 BC022086 BC010963 AK291352 AK308199 BC007074 BC034143 BC107798 M19308 M19309 TSC_hg19_v1_chr19_-_55660575 NM_001126132 NM_001126133 NM_003283	68725	-	AK000265|EPS8L1|54869|EPS8-like 1##AK301615|EPS8L1|54869|EPS8-like 1##NM_017729|EPS8L1|54869|EPS8-like 1##BC015763|EPS8L1|54869|EPS8-like 1##AK309305|EPS8L1|54869|EPS8-like 1##NM_133180|EPS8L1|54869|EPS8-like 1##AF370395|EPS8L1|54869|EPS8-like 1##AK075098|EPS8L1|54869|EPS8-like 1##AK296732|EPS8L1|54869|EPS8-like 1##BC009881|RDH13|112724|retinol dehydrogenase 13 (all-trans/9-cis)##NM_138412|RDH13|112724|retinol dehydrogenase 13 (all-trans/9-cis)##AB209452|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##AF312028|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##NM_017607|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##AY762903|TNNT1|7138|troponin T type 1 (skeletal, slow)##AY762904|TNNT1|7138|troponin T type 1 (skeletal, slow)##BT019630|TNNT1|7138|troponin T type 1 (skeletal, slow)##S51938|TNNT1|7138|troponin T type 1 (skeletal, slow)##S69208|TNNT1|7138|troponin T type 1 (skeletal, slow)##S69209|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC022086|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC010963|TNNT1|7138|troponin T type 1 (skeletal, slow)##AK291352|TNNT1|7138|troponin T type 1 (skeletal, slow)##AK308199|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC007074|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC034143|TNNT1|7138|troponin T type 1 (skeletal, slow)##BC107798|TNNT1|7138|troponin T type 1 (skeletal, slow)##M19308|TNNT1|7138|troponin T type 1 (skeletal, slow)##M19309|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_001126132|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_001126133|TNNT1|7138|troponin T type 1 (skeletal, slow)##NM_003283|TNNT1|7138|troponin T type 1 (skeletal, slow)	0.0	
chr3	42234108	42234223	reg1036396.p1	3.927	+	TSC_hg19_v1_chr3_+_42201684 BX647199 NM_014965 BC015922 AK000754 AM392573 AM393596 CU677507 EU446989	-32410	+	AL713787 TSC_hg19_v1_chr3_+_42190865	-43318	+	TSC_hg19_v1_chr3_+_42190749 AK294221	-43417	+	BC008283 NM_001174138	71273	-	BC111026 NM_000729	73496	-	AF326749 BC016747 NM_144634	217878	-	BX647199|TRAK1|22906|trafficking protein, kinesin binding 1##NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1##BC015922|TRAK1|22906|trafficking protein, kinesin binding 1##AK000754|TRAK1|22906|trafficking protein, kinesin binding 1##AM392573|TRAK1|22906|trafficking protein, kinesin binding 1##AM393596|TRAK1|22906|trafficking protein, kinesin binding 1##EU446989|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##BC008283|CCK|885|cholecystokinin##NM_001174138|CCK|885|cholecystokinin##BC111026|CCK|885|cholecystokinin##NM_000729|CCK|885|cholecystokinin##AF326749|LYZL4|131375|lysozyme-like 4##BC016747|LYZL4|131375|lysozyme-like 4##NM_144634|LYZL4|131375|lysozyme-like 4	0.0	
chr4	138045582	138045697	reg1033248.p1	3.927	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-2922721	-	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	-3972356	+	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	-3975183	+	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	407953	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	408003	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	1117725	-	NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	0.0	
chr4	9104990	9105084	reg1036926.p1	3.927	+	NM_001040071	-153561	+	AB593128 M99587 NM_018942	-231540	-	U83411 TSC_hg19_v1_chr4_+_8594521	-510514	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	112092	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	140566	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	154811	+	NM_001040071|LOC650293|650293|seven transmembrane helix receptor##M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.0	
chr7	155009432	155009555	reg1029687.p1	3.927	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	-146916	+	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	-214282	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	-214823	-	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	80029	+	AK291675 TSC_hg19_v1_chr7_+_155089667	80151	+	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	241271	+	BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##AK291675|INSIG1|3638|insulin induced gene 1##BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2	0.04904	
chr8	22559134	22559270	reg1038373.p2	3.927	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-8418	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-8697	-	AK294968 AK295834 NM_001199881	-9128	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	226122	-	AK092617 BC034917 NM_001160036	285721	+	NM_001160037	294158	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.81255	CTCF.p2:35:0.813
chr9	112810643	112810762	reg1035768.p2	3.927	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	-268087	+	BC039306 NM_001037293 AK095003	-407633	+	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	-550113	-	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	207	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	261	+	NM_001136562 AK300427	77090	+	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2	0.0	
chr12	64160388	64160527	reg1035334.p1	3.926	+	BC125215 BC125216 TSC_hg19_v1_chr12_-_64062283 AY358792 AL833344 AK310102 AK057511 BC068442 NM_173812	-98161	-	NM_000706	-613868	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	-615786	-	TSC_hg19_v1_chr12_+_64173629 AB015633 NM_014254 BC013152 BC002596 AK289382 CU680528 DQ891077 DQ894259	13210	+	BX647105 BX647419 TSC_hg19_v1_chr12_+_64173925	13478	+	TSC_hg19_v1_chr12_+_64237847 BC065032	77269	+	BC125215|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC125216|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AY358792|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AL833344|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK310102|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK057511|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC068442|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_173812|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_000706|AVPR1A|552|arginine vasopressin receptor 1A##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A##AB015633|TMEM5|10329|transmembrane protein 5##NM_014254|TMEM5|10329|transmembrane protein 5##BC013152|TMEM5|10329|transmembrane protein 5##BC002596|TMEM5|10329|transmembrane protein 5##AK289382|TMEM5|10329|transmembrane protein 5##DQ891077|TMEM5|10329|transmembrane protein 5##DQ894259|TMEM5|10329|transmembrane protein 5##BX647105|TMEM5|10329|transmembrane protein 5##BX647419|TMEM5|10329|transmembrane protein 5	0.060904	
chr1	41889197	41889301	reg1033805.p1	3.926	+	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-181413	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-181464	-	BC021252 NM_001172221	-260561	-	BC034393 X55177 M65199 NM_001956	61070	-	TSC_hg19_v1_chr1_-_42384357 BC040942	495093	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	495124	-	BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC021252|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172221|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.955825	CTCF.p2:14:0.905
chr19	16181355	16181469	reg1033861.p2	3.926	+	TSC_hg19_v1_chr19_+_16178347 NM_001145160 AK023385	-3152	+	BC031284 TSC_hg19_v1_chr19_+_16145007	-36444	+	NM_001004465	-121595	+	TSC_hg19_v1_chr19_+_16187132 NM_003290	5688	+	TSC_hg19_v1_chr19_+_16187304 BC037576 AK300136 AK307538 AK301285	5873	+	TSC_hg19_v1_chr19_+_16187306 BC067225	5897	+	NM_001145160|TPM4|7171|tropomyosin 4##AK023385|TPM4|7171|tropomyosin 4##BC031284|FLJ25328|148231|uncharacterized LOC148231##NM_001004465|OR10H4|126541|olfactory receptor, family 10, subfamily H, member 4##NM_003290|TPM4|7171|tropomyosin 4##BC037576|TPM4|7171|tropomyosin 4##AK300136|TPM4|7171|tropomyosin 4##AK307538|TPM4|7171|tropomyosin 4##AK301285|TPM4|7171|tropomyosin 4##BC067225|TPM4|7171|tropomyosin 4	0.0	
chr20	1190260	1190366	reg1027825.p1	3.926	+	AK092524 NM_001009612 BC127730 BC127731 BC141955 BC141956 BC150531 BC150532	-6181	+	AK002052 NM_018354	-25197	-	TSC_hg19_v1_chr20_+_1099244 NM_006814 AK098612 AK294134 D88378 AB590890 HQ258165 AK300667	-90960	+	BC157891 BC171911 NM_001136566	16450	+	BC035788 NM_014723 AB002372 AF187733	56665	+	AB464263 AJ292245 AF131809 NM_015685	103900	-	AK092524|C20orf202|400831|chromosome 20 open reading frame 202##NM_001009612|C20orf202|400831|chromosome 20 open reading frame 202##BC127730|C20orf202|400831|chromosome 20 open reading frame 202##BC127731|C20orf202|400831|chromosome 20 open reading frame 202##BC141955|C20orf202|400831|chromosome 20 open reading frame 202##BC141956|C20orf202|400831|chromosome 20 open reading frame 202##BC150532|C20orf202|400831|chromosome 20 open reading frame 202##AK002052|TMEM74B|55321|transmembrane protein 74B##NM_018354|TMEM74B|55321|transmembrane protein 74B##NM_006814|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK098612|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK294134|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##D88378|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##HQ258165|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK300667|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##BC157891|RAD21L1|642636|RAD21-like 1 (S. pombe)##BC171911|RAD21L1|642636|RAD21-like 1 (S. pombe)##NM_001136566|RAD21L1|642636|RAD21-like 1 (S. pombe)##BC035788|SNPH|9751|syntaphilin##NM_014723|SNPH|9751|syntaphilin##AB002372|SNPH|9751|syntaphilin##AF187733|SNPH|9751|syntaphilin##AJ292245|SDCBP2|27111|syndecan binding protein (syntenin) 2##AF131809|SDCBP2|27111|syndecan binding protein (syntenin) 2##NM_015685|SDCBP2|27111|syndecan binding protein (syntenin) 2	0.037646	
chr20	62870267	62870386	reg1024928.p1	3.926	+	AB020642 NM_004535 TSC_hg19_v1_chr20_+_62795840	-74493	+	TSC_hg19_v1_chr20_+_62795804 BC018917	-74536	+	BC067481 BC067482 BC067483 CU688304 CU688306 NM_005286	-132143	-	TSC_hg19_v1_chr20_+_62887100 NM_001104925 NM_018257 BC040945 BC032332 AK001745 BC045775	16835	+	None	None	None	None	None	None	AB020642|MYT1|4661|myelin transcription factor 1##NM_004535|MYT1|4661|myelin transcription factor 1##BC018917|MYT1|4661|myelin transcription factor 1##BC067481|NPBWR2|2832|neuropeptides B/W receptor 2##BC067482|NPBWR2|2832|neuropeptides B/W receptor 2##BC067483|NPBWR2|2832|neuropeptides B/W receptor 2##NM_005286|NPBWR2|2832|neuropeptides B/W receptor 2##NM_001104925|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##NM_018257|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC040945|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC032332|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##AK001745|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC045775|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	1.121665	CTCF.p2:-2:0.991
chr2	150170055	150170227	reg1034955.p1	3.926	+	BC040176 NM_177964	-275161	+	TSC_hg19_v1_chr2_+_149633176 AB384491	-536962	+	BC017298 TSC_hg19_v1_chr2_+_149632844	-537301	+	AK124733 NM_001195685	16357	+	NM_194317 TSC_hg19_v1_chr2_+_150187114 AY358623 AK309248	16961	+	AF131802 TSC_hg19_v1_chr2_-_150444230 AK313284	274084	-	BC040176|LYPD6B|130576|LY6/PLAUR domain containing 6B##NM_177964|LYPD6B|130576|LY6/PLAUR domain containing 6B##BC017298|KIF5C|3800|kinesin family member 5C##AK124733|LYPD6|130574|LY6/PLAUR domain containing 6##NM_001195685|LYPD6|130574|LY6/PLAUR domain containing 6##NM_194317|LYPD6|130574|LY6/PLAUR domain containing 6##AY358623|LYPD6|130574|LY6/PLAUR domain containing 6##AK309248|LYPD6|130574|LY6/PLAUR domain containing 6##AF131802|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK313284|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria	0.0	
chr4	113153431	113153611	reg1027200.p3	3.926	+	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	-437	+	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	-86907	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1590243	-	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	53480	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	65006	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	283811	-	NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2	0.0	
chr5	172593436	172593519	reg1035056.p2	3.926	+	NM_001205 NM_013978 NM_013979 NM_013980 BC010959 TSC_hg19_v1_chr5_+_172571536 AF083957 AF083958 U15172 AB527856 CU679862 AF083956 AY216799	-21981	+	TSC_hg19_v1_chr5_+_172484383 AK297424	-109094	+	TSC_hg19_v1_chr5_+_172483354 BX647768 NM_001168393 NM_001168394 NM_153607 AK300043 AY139008 BC041709 AY174896 AK124117 BX647573 AK291677	-110093	+	AB021133 CU693024 AB464641 DQ893313 DQ894104 DQ896627 BC025711 AK290615 AK307249 AK297844 AK307218 AK309495 U34962 AK307247 NM_001166175 NM_001166176 NM_004387	68722	-	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	161785	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	161966	-	NM_001205|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013978|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013979|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013980|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##BC010959|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083957|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083958|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##U15172|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083956|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AY216799|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AK297424|C5orf41|153222|chromosome 5 open reading frame 41##BX647768|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168393|C5orf41|153222|chromosome 5 open reading frame 41##NM_001168394|C5orf41|153222|chromosome 5 open reading frame 41##NM_153607|C5orf41|153222|chromosome 5 open reading frame 41##AK300043|C5orf41|153222|chromosome 5 open reading frame 41##AY139008|C5orf41|153222|chromosome 5 open reading frame 41##BC041709|C5orf41|153222|chromosome 5 open reading frame 41##AY174896|C5orf41|153222|chromosome 5 open reading frame 41##AK124117|C5orf41|153222|chromosome 5 open reading frame 41##BX647573|C5orf41|153222|chromosome 5 open reading frame 41##AK291677|C5orf41|153222|chromosome 5 open reading frame 41##AB021133|NKX2-5|1482|NK2 homeobox 5##DQ893313|NKX2-5|1482|NK2 homeobox 5##DQ894104|NKX2-5|1482|NK2 homeobox 5##DQ896627|NKX2-5|1482|NK2 homeobox 5##BC025711|NKX2-5|1482|NK2 homeobox 5##AK290615|NKX2-5|1482|NK2 homeobox 5##AK307249|NKX2-5|1482|NK2 homeobox 5##AK297844|NKX2-5|1482|NK2 homeobox 5##AK307218|NKX2-5|1482|NK2 homeobox 5##AK309495|NKX2-5|1482|NK2 homeobox 5##U34962|NKX2-5|1482|NK2 homeobox 5##AK307247|NKX2-5|1482|NK2 homeobox 5##NM_001166175|NKX2-5|1482|NK2 homeobox 5##NM_001166176|NKX2-5|1482|NK2 homeobox 5##NM_004387|NKX2-5|1482|NK2 homeobox 5##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2	0.293292	CTCF.p2:6:0.293
chr5	61817386	61817567	reg1031618.p2	3.926	+	AK302781 NM_001134779	-102766	+	TSC_hg19_v1_chr5_+_61708589 NM_016338 AK001696 BC033776	-108852	+	TSC_hg19_v1_chr5_-_61699730 BC002841 BC017885 NM_014473 AK292723	-117717	-	AK123022 NM_181506 BX649157 AY358733 BC110838 AY280614	57162	+	AF498978 BC069159 NM_000524 AB464441 BC136263 TSC_hg19_v1_chr5_-_63257719 AK291429 AK311460	1440186	-	AK314187 TSC_hg19_v1_chr5_-_63258084	1440546	-	AK302781|IPO11|51194|importin 11##NM_001134779|IPO11|51194|importin 11##NM_016338|IPO11|51194|importin 11##AK001696|IPO11|51194|importin 11##BC033776|IPO11|51194|importin 11##BC002841|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##BC017885|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##NM_014473|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##AK292723|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##AK123022|LRRC70|100130733|leucine rich repeat containing 70##NM_181506|LRRC70|100130733|leucine rich repeat containing 70##AY358733|LRRC70|100130733|leucine rich repeat containing 70##BC110838|LRRC70|100130733|leucine rich repeat containing 70##AY280614|LRRC70|100130733|leucine rich repeat containing 70##AF498978|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC069159|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_000524|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC136263|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK291429|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A	0.0	
chr6	24575177	24575286	reg1031674.p1	3.926	+	TSC_hg19_v1_chr6_+_24495196 AK314357 BC034321 NM_001080 NM_170740 DQ891671 DQ894857 AJ427355 Y11192	-80036	+	TSC_hg19_v1_chr6_+_24495080 AK290800 AK294699 AK315380	-80153	+	L11702 CU676688 AY007546 BC093645 BC112001 L11701 AK310692 BC020748 NM_177483 AJ308108 NM_001503	-85438	-	AK310289 NM_001252328	8223	-	AK296310 AK295008 AK307503 AK296426 BC140821 BC144628 NM_001168375 NM_001168376 TSC_hg19_v1_chr6_-_24646374 AB002317 BC152460 NM_001168374 NM_001168377 NM_014809	70937	-	AJ420495 TSC_hg19_v1_chr6_-_24667106 AK296623 AB587417 AK002168 EU446614 BC110375 AF223469 AJ269473 AF201687 BC017553 NM_016614 AK308836	91739	-	AK314357|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##BC034321|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_001080|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_170740|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ891671|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ894857|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AJ427355|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##Y11192|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK290800|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK294699|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK315380|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##L11702|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AY007546|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC093645|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC112001|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##L11701|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310692|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC020748|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_177483|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AJ308108|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_001503|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310289|KIAA0319|9856|KIAA0319##NM_001252328|KIAA0319|9856|KIAA0319##AK296310|KIAA0319|9856|KIAA0319##AK295008|KIAA0319|9856|KIAA0319##AK307503|KIAA0319|9856|KIAA0319##AK296426|KIAA0319|9856|KIAA0319##BC140821|KIAA0319|9856|KIAA0319##BC144628|KIAA0319|9856|KIAA0319##NM_001168375|KIAA0319|9856|KIAA0319##NM_001168376|KIAA0319|9856|KIAA0319##AB002317|KIAA0319|9856|KIAA0319##BC152460|KIAA0319|9856|KIAA0319##NM_001168374|KIAA0319|9856|KIAA0319##NM_001168377|KIAA0319|9856|KIAA0319##NM_014809|KIAA0319|9856|KIAA0319##AJ420495|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK296623|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK002168|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##EU446614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC110375|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF223469|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AJ269473|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF201687|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC017553|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##NM_016614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK308836|TDP2|51567|tyrosyl-DNA phosphodiesterase 2	0.0	
chr6	6918795	6918972	reg1033187.p1	3.926	+	BC039678 TSC_hg19_v1_chr6_+_6725205	-193722	+	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	-329933	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-597973	-	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	188943	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	189152	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	189340	+	NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1	0.0	
chr7	105681720	105681819	reg1038509.p1	3.926	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	-78071	+	TSC_hg19_v1_chr7_+_105517250 AK125261	-164505	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	-164784	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	70912	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	70975	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	71246	-	NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3##AK125261|CDHR3|222256|cadherin-related family member 3##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##X61382|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1	0.0	
chr8	69489825	69489935	reg1030418.p1	3.926	+	BC041961 NM_001195639 NM_052958	-246924	+	AK294299 TSC_hg19_v1_chr8_+_68864738	-625150	+	TSC_hg19_v1_chr8_+_68864614 AY570973	-625247	+	AK095341 NM_001128204 NM_015170 TSC_hg19_v1_chr8_+_70378858 AF545571	888985	+	TSC_hg19_v1_chr8_+_70379077 AK307951	889200	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	915159	+	BC041961|C8orf34|116328|chromosome 8 open reading frame 34##NM_001195639|C8orf34|116328|chromosome 8 open reading frame 34##NM_052958|C8orf34|116328|chromosome 8 open reading frame 34##AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AK095341|SULF1|23213|sulfatase 1##NM_001128204|SULF1|23213|sulfatase 1##NM_015170|SULF1|23213|sulfatase 1##AF545571|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1	0.985534	CTCF.p2:-23:0.986
chr10	45938169	45938236	reg1046472.p2	3.925	+	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	-68505	+	TSC_hg19_v1_chr10_+_45869638 AB208946 NM_000698 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223	-68565	+	AK131555 NM_001004297	-127147	-	AK313340 BC025394 NM_001002266 AK307667	92617	-	TSC_hg19_v1_chr10_-_46090318 BC066988 NM_001002265 NM_145021	152092	-	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	230012	-	BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase##AB208946|ALOX5|240|arachidonate 5-lipoxygenase##NM_000698|ALOX5|240|arachidonate 5-lipoxygenase##AK225603|ALOX5|240|arachidonate 5-lipoxygenase##BC130332|ALOX5|240|arachidonate 5-lipoxygenase##BC132677|ALOX5|240|arachidonate 5-lipoxygenase##BC143985|ALOX5|240|arachidonate 5-lipoxygenase##BC143986|ALOX5|240|arachidonate 5-lipoxygenase##AK315223|ALOX5|240|arachidonate 5-lipoxygenase##AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##AK313340|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC025394|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002266|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK307667|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC066988|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002265|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_145021|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4	0.95464	CTCF.p2:9:0.955
chr12	31957167	31957347	reg1032033.p1	3.925	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	-12053	-	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	-75201	-	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	-75283	-	TSC_hg19_v1_chr12_+_32112348 NM_018169	155074	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	155137	+	TSC_hg19_v1_chr12_+_32259750 BC010091	302457	+	BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)	0.0	
chr13	20162005	20162071	reg1032454.p1	3.925	+	BC128146 BC128147 AJ421032 AY219890 NM_001141968 NM_130785 NM_199254	-51145	-	BC011721 NM_006001	-406076	-	None	None	None	TSC_hg19_v1_chr13_+_20207808 AK300258 NM_017520 BC017322 AK092556 AX747597 AL832864 BC003542	45797	+	TSC_hg19_v1_chr13_-_20346399 AL834505	184402	-	CR457272 DQ892679 DQ895922 AB528394 AF448795 AF449627 TSC_hg19_v1_chr13_-_20357042	194877	-	BC128146|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##BC128147|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AJ421032|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AY219890|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_001141968|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_130785|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_199254|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##BC011721|TUBA3C|7278|tubulin, alpha 3c##NM_006001|TUBA3C|7278|tubulin, alpha 3c##AK300258|MPHOSPH8|54737|M-phase phosphoprotein 8##NM_017520|MPHOSPH8|54737|M-phase phosphoprotein 8##BC017322|MPHOSPH8|54737|M-phase phosphoprotein 8##AK092556|MPHOSPH8|54737|M-phase phosphoprotein 8##AL832864|MPHOSPH8|54737|M-phase phosphoprotein 8##BC003542|MPHOSPH8|54737|M-phase phosphoprotein 8##AL834505|PSPC1|55269|paraspeckle component 1##CR457272|PSPC1|55269|paraspeckle component 1##DQ892679|PSPC1|55269|paraspeckle component 1##DQ895922|PSPC1|55269|paraspeckle component 1##AF448795|PSPC1|55269|paraspeckle component 1##AF449627|PSPC1|55269|paraspeckle component 1	0.0	
chr13	44542880	44542963	reg1037195.p2	3.925	+	AK096044 NM_153218 TSC_hg19_v1_chr13_+_44453986 BC035749	-88915	+	NM_144974 AK056408	-89096	-	NM_001128303	-89502	+	BC029067 NM_001010897 TSC_hg19_v1_chr13_+_44947983	405061	+	U35048 TSC_hg19_v1_chr13_-_45010962 AJ222700 BC105277 BC069207	468031	-	BC146664 BC146679 TSC_hg19_v1_chr13_-_45010983 BC000456 BC016867	468058	-	AK096044|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_153218|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC035749|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC029067|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##NM_001010897|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##U35048|TSC22D1|8848|TSC22 domain family, member 1##AJ222700|TSC22D1|8848|TSC22 domain family, member 1##BC105277|TSC22D1|8848|TSC22 domain family, member 1##BC069207|TSC22D1|8848|TSC22 domain family, member 1##BC146664|TSC22D1|8848|TSC22 domain family, member 1##BC146679|TSC22D1|8848|TSC22 domain family, member 1##BC000456|TSC22D1|8848|TSC22 domain family, member 1##BC016867|TSC22D1|8848|TSC22 domain family, member 1	0.0	
chr15	27604108	27604205	reg1037312.p1	3.925	+	NM_033223 BC029850 BC045709 S82769	-387609	+	L08485 AK290453 TSC_hg19_v1_chr15_+_27112237 NM_001165037	-491920	+	NM_000810	-492291	+	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	740277	-	AF071172 BC015486 BC142951 BC045544 NM_004667	963115	-	TSC_hg19_v1_chr15_+_29033278 AK302529	1429167	+	NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##L08485|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AK290453|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_001165037|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_000810|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene	0.851848	CTCF.p2:9:0.816
chr16	50055531	50055679	reg1036479.p1	3.925	+	NM_015069	-194688	-	BC021181 BC021718 NM_144602 CU676858	-647777	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-739871	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	3535	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	44288	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	44355	+	NM_015069|ZNF423|23090|zinc finger protein 423##BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3	0.042626	
chr22	44440044	44440144	reg1024941.p2	3.925	+	AK308443 NM_001243386	-17911	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	-19895	+	AF303887 NM_001003828	-45004	+	BC039811 NM_001243385	24902	+	NM_001137605 AK309348 AK293360	128762	+	NM_022141 AK225929 AK307294 BC034406 AF237772	136718	+	AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##AF303887|PARVB|29780|parvin, beta##NM_001003828|PARVB|29780|parvin, beta##BC039811|PARVB|29780|parvin, beta##NM_001243385|PARVB|29780|parvin, beta##NM_001137605|PARVG|64098|parvin, gamma##AK309348|PARVG|64098|parvin, gamma##AK293360|PARVG|64098|parvin, gamma##NM_022141|PARVG|64098|parvin, gamma##AK225929|PARVG|64098|parvin, gamma##AK307294|PARVG|64098|parvin, gamma##BC034406|PARVG|64098|parvin, gamma##AF237772|PARVG|64098|parvin, gamma	0.0	
chr4	4763385	4763479	reg1032814.p1	3.925	+	TSC_hg19_v1_chr4_+_4543925 BC025734	-219548	+	TSC_hg19_v1_chr4_-_4543750 NM_016930	-219671	-	TSC_hg19_v1_chr4_-_4543741 AK310026	-219701	-	TSC_hg19_v1_chr4_+_4861391 NM_002448 AK290636 M97676 BC021285	97966	+	AF274956 BC031391 DQ890790 DQ890792 DQ893946 NM_018659 AY359101 AF193766	257714	-	TSC_hg19_v1_chr4_+_5053252 AK313846 AK292696 BC069203	289848	+	BC025734|LOC100507266|100507266|uncharacterized LOC100507266##NM_016930|STX18|53407|syntaxin 18##AK310026|STX18|53407|syntaxin 18##NM_002448|MSX1|4487|msh homeobox 1##AK290636|MSX1|4487|msh homeobox 1##M97676|MSX1|4487|msh homeobox 1##BC021285|MSX1|4487|msh homeobox 1##AF274956|CYTL1|54360|cytokine-like 1##BC031391|CYTL1|54360|cytokine-like 1##DQ890790|CYTL1|54360|cytokine-like 1##DQ890792|CYTL1|54360|cytokine-like 1##DQ893946|CYTL1|54360|cytokine-like 1##NM_018659|CYTL1|54360|cytokine-like 1##AY359101|CYTL1|54360|cytokine-like 1##AF193766|CYTL1|54360|cytokine-like 1##AK313846|STK32B|55351|serine/threonine kinase 32B##AK292696|STK32B|55351|serine/threonine kinase 32B##BC069203|STK32B|55351|serine/threonine kinase 32B	0.165766	
chr4	58928281	58928409	reg1028803.p1	3.925	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-951777	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-951813	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-951946	-	TSC_hg19_v1_chr4_+_62066948 AK309793	3138630	+	NM_015236	3434493	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	6346751	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.372965	CTCF.p2:-4:0.373
chr5	21817918	21818039	reg1030855.p1	3.925	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	-358330	+	TSC_hg19_v1_chr5_+_21459621 AK290693	-358369	+	AK295087 BC031051 NM_001167667 NM_004934	-1829656	-	TSC_hg19_v1_chr5_-_22212879 AK314800	394903	-	BC047608 TSC_hg19_v1_chr5_-_22853454	1035468	-	L33477 NM_004061	1035752	-	BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	0.770017	CTCF.p2:-13:0.770
chr6	138841736	138841879	reg1034805.p1	3.925	+	TSC_hg19_v1_chr6_-_138820580 AK092744 AX747703	-21191	-	AK307584 NM_001144060 TSC_hg19_v1_chr6_-_138820579	-21229	-	BC010290 TSC_hg19_v1_chr6_+_138725477 BC008205 BC093037 AF411610	-116262	+	TSC_hg19_v1_chr6_-_138893682 NM_020464	51901	-	TSC_hg19_v1_chr6_+_139013613 AK128874	171806	+	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	252983	+	AK307584|NHSL1|57224|NHS-like 1##NM_001144060|NHSL1|57224|NHS-like 1##BC010290|HEBP2|23593|heme binding protein 2##BC008205|HEBP2|23593|heme binding protein 2##BC093037|HEBP2|23593|heme binding protein 2##AF411610|HEBP2|23593|heme binding protein 2##NM_020464|NHSL1|57224|NHS-like 1##AK128874|FLJ46906|441172|uncharacterized LOC441172##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A	0.704728	CTCF.p2:-29:0.705
chr6	144334447	144334627	reg1004659.p1	3.925	+	TSC_hg19_v1_chr6_-_144329394 AK314570 BC059359 AK096331 NM_001080952 NM_001080953 NM_001080954 NM_001080956 NM_002656 NM_006718 AJ311395 U72621	-5073	-	EF100446 EF100447 EF100448 EF100449 EF100450 EF100451 EF100452 TSC_hg19_v1_chr6_-_144329322	-5249	-	BC146950 BC146969 BC171862 NM_001013623	-148965	+	EF100438 EF100439 EF100440 EF100441 EF100442 EF100443 EF100444 EF100445 TSC_hg19_v1_chr6_-_144385724 NM_001080951 NM_001080955	51153	-	AB528231 AM393071 BC000198 TSC_hg19_v1_chr6_-_144416703 AK312079 AK074417	82134	-	NM_031287 TSC_hg19_v1_chr6_-_144416757	82225	-	AK314570|PLAGL1|5325|pleiomorphic adenoma gene-like 1##BC059359|HYMAI|57061|hydatidiform mole associated and imprinted (non-protein coding)##AK096331|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080952|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080953|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080954|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080956|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_002656|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_006718|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AJ311395|PLAGL1|5325|pleiomorphic adenoma gene-like 1##U72621|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100446|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100447|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100448|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100449|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100450|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100451|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100452|PLAGL1|5325|pleiomorphic adenoma gene-like 1##BC146950|C6orf94|153918|chromosome 6 open reading frame 94##BC146969|C6orf94|153918|chromosome 6 open reading frame 94##BC171862|C6orf94|153918|chromosome 6 open reading frame 94##NM_001013623|C6orf94|153918|chromosome 6 open reading frame 94##EF100438|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100439|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100440|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100441|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100442|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100443|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100444|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100445|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080951|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080955|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AM393071|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##BC000198|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK312079|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK074417|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##NM_031287|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa	0.0	
chr8	142046277	142046457	reg1032536.p2	3.925	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-35111	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-400743	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-524804	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	92370	+	AK128212 NM_001080431	192305	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	217823	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.010718	
chr8	66055699	66055791	reg1030758.p1	3.925	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	-344466	-	TSC_hg19_v1_chr8_+_65493611 AK091333	-562081	+	NM_152414 AK293979	-562887	+	TSC_hg19_v1_chr8_-_66546394 AK001373	490650	-	TSC_hg19_v1_chr8_-_66546404 AK304463	490661	-	TSC_hg19_v1_chr8_-_66546413 BC011607 BC018846 NM_018120	490687	-	BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK001373|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1##BC011607|ARMC1|55156|armadillo repeat containing 1##BC018846|ARMC1|55156|armadillo repeat containing 1##NM_018120|ARMC1|55156|armadillo repeat containing 1	0.20357	CTCF.p2:9:0.204
chr10	61381663	61381844	reg1005923.p1	3.924	+	AK299924 NM_001143773	-259093	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-259468	-	AL365474 NM_001143774 AM393181	-444465	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	87971	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	284448	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	284571	-	AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6	0.0	
chr10	97580269	97580395	reg1029746.p1	3.924	+	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	-64792	+	AJ133133 AJ133134 NM_001098175	-108797	+	BC068449 DQ278872 NM_001143973 NM_015631	-126433	-	AK294399 NM_001130446	87389	+	NM_001001732 NM_001159747 AK302377 BC075861	179532	+	TSC_hg19_v1_chr10_+_97803318 BC043175 NM_001134375 NM_001134376 NM_019084 AK092360 AK297264 AX747499	223049	+	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##BC068449|TCTN3|26123|tectonic family member 3##DQ278872|TCTN3|26123|tectonic family member 3##NM_001143973|TCTN3|26123|tectonic family member 3##NM_015631|TCTN3|26123|tectonic family member 3##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B##NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC043175|CCNJ|54619|cyclin J##NM_001134375|CCNJ|54619|cyclin J##NM_001134376|CCNJ|54619|cyclin J##NM_019084|CCNJ|54619|cyclin J##AK092360|CCNJ|54619|cyclin J##AK297264|CCNJ|54619|cyclin J	0.0	
chr11	115041068	115041195	reg1032870.p1	3.924	+	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-491883	+	AK000134 AK225236 TSC_hg19_v1_chr11_-_114466485 NM_001077639 NM_017678	-574653	-	AY358805 TSC_hg19_v1_chr11_-_114466403	-574726	-	AY309502 TSC_hg19_v1_chr11_-_115088658	47517	-	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	334049	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	1602567	-	NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##AK000134|FAM55D|54827|family with sequence similarity 55, member D##AK225236|FAM55D|54827|family with sequence similarity 55, member D##NM_001077639|FAM55D|54827|family with sequence similarity 55, member D##NM_017678|FAM55D|54827|family with sequence similarity 55, member D##AY358805|FAM55D|54827|family with sequence similarity 55, member D##AY309502|CADM1|23705|cell adhesion molecule 1##AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)	0.028413	
chr13	103452858	103453017	reg1007958.p2	3.924	+	AF411385 NM_001159596 NM_017693 TSC_hg19_v1_chr13_+_103451468 AK290658 AK304391 BC112339	-1296	+	BC051860 TSC_hg19_v1_chr13_-_103451388 AY358959 AK074974 AK222567 AK225103 AK309238 BC001297 NM_024089	-1600	-	NM_138779 TSC_hg19_v1_chr13_-_103426169	-26779	-	NM_001204425 BC075084 BC075085 AB209312 AK000166 AK225229 BC020663 BC051813	6723	+	TSC_hg19_v1_chr13_+_103498240 NM_000123 BC031522 AF462447	45272	+	AK294708 TSC_hg19_v1_chr13_+_103498254	45317	+	AF411385|BIVM|54841|basic, immunoglobulin-like variable motif containing##NM_001159596|BIVM|54841|basic, immunoglobulin-like variable motif containing##NM_017693|BIVM|54841|basic, immunoglobulin-like variable motif containing##AK290658|BIVM|54841|basic, immunoglobulin-like variable motif containing##AK304391|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC112339|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC051860|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AY358959|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AK074974|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AK222567|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AK225103|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AK309238|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##BC001297|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##NM_024089|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##NM_138779|C13orf27|93081|chromosome 13 open reading frame 27##NM_001204425|BIVM-ERCC5|100533467|BIVM-ERCC5 readthrough##BC075084|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC075085|BIVM|54841|basic, immunoglobulin-like variable motif containing##AB209312|BIVM-ERCC5|100533467|BIVM-ERCC5 readthrough##AK000166|BIVM|54841|basic, immunoglobulin-like variable motif containing##AK225229|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC020663|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC051813|BIVM|54841|basic, immunoglobulin-like variable motif containing##NM_000123|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##BC031522|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AF462447|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5	0.0	
chr13	76210857	76211037	reg1030912.p2	3.924	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-477	+	AF330045 NM_005358	-16378	+	TSC_hg19_v1_chr13_+_76123890 AK313665 BC018125 NM_006002 M30496 CU676190 BT019359 CR456855	-87023	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	123893	+	BC013764 TSC_hg19_v1_chr13_-_77460431	1249453	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	1249660	-	AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##AK313665|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BC018125|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_006002|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##M30496|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BT019359|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##CR456855|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12	0.0	
chr17	55540605	55540742	reg1036402.p1	3.924	+	AK093888 AX748353 NM_170721	-206300	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-206700	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-377530	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	386731	-	AK000746 NM_017949	440076	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	492003	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.0	
chr17	70714798	70714899	reg1038900.p1	3.924	+	AK000477 TSC_hg19_v1_chr17_-_70588944	-125905	-	TSC_hg19_v1_chr17_+_70117187 BC007951	-597608	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-597678	+	AF331643 TSC_hg19_v1_chr17_-_71088816	373968	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	373975	-	BC035631 TSC_hg19_v1_chr17_-_71088831	373983	-	AK000477|LOC100499467|100499467|uncharacterized LOC100499467##BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr19	2163604	2163738	reg1034425.p1	3.924	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-12118	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	-12129	-	CU679595 AB384738 BC005142 TSC_hg19_v1_chr19_-_2151519	-12246	-	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	467	+	BC021037 TSC_hg19_v1_chr19_+_2222534	58803	+	BC032803 TSC_hg19_v1_chr19_+_2232168	68450	+	NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC005142|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	0.0	
chr22	47566291	47566425	reg1032523.p2	3.924	+	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	-407758	+	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	-432203	-	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	-432279	-	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	461145	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	1318922	+	AK125256 NM_015381 AK123443 AY358847	1405803	+	NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##AK093107|LOC284930|284930|uncharacterized LOC284930##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	0.0	
chr4	153269942	153270049	reg1040059.p1	3.924	+	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	-587854	-	TSC_hg19_v1_chr4_+_152330327 NM_001109977	-939634	+	BC121109 BC121110 NM_183375	-1071671	+	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	3901	-	NM_001013415 AY008274	33669	-	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	186299	-	AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##NM_001109977|FAM160A1|729830|family with sequence similarity 160, member A1##BC121109|PRSS48|345062|protease, serine, 48##BC121110|PRSS48|345062|protease, serine, 48##NM_183375|PRSS48|345062|protease, serine, 48##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7	0.470879	CTCF.p2:6:0.471
chr10	134938407	134938494	reg1029289.p1	3.923	+	NM_001083909 TSC_hg19_v1_chr10_+_134901429 AK124728	-36993	+	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	-182412	-	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	-338944	-	TSC_hg19_v1_chr10_+_134973945 NM_152643 AK090457	35521	+	AB011076 AY606112 NM_003577	105326	+	AF068006 BC108915 BC108916 NM_014468 AB464343 EU446701	112961	+	NM_001083909|GPR123|84435|G protein-coupled receptor 123##AK124728|GPR123|84435|G protein-coupled receptor 123##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##NM_152643|KNDC1|85442|kinase non-catalytic C-lobe domain (KIND) containing 1##AK090457|KNDC1|85442|kinase non-catalytic C-lobe domain (KIND) containing 1##AB011076|UTF1|8433|undifferentiated embryonic cell transcription factor 1##AY606112|UTF1|8433|undifferentiated embryonic cell transcription factor 1##NM_003577|UTF1|8433|undifferentiated embryonic cell transcription factor 1##AF068006|VENTX|27287|VENT homeobox##BC108915|VENTX|27287|VENT homeobox##BC108916|VENTX|27287|VENT homeobox##NM_014468|VENTX|27287|VENT homeobox##EU446701|VENTX|27287|VENT homeobox	0.896171	CTCF.p2:-18:0.896
chr10	23144029	23144103	reg1034357.p2	3.923	+	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	-140576	-	AK294817 TSC_hg19_v1_chr10_-_23003038	-141029	-	TSC_hg19_v1_chr10_+_22726003 AK295718	-418067	+	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	72915	+	BC117471 BC130380 NM_012228 BC018030 TSC_hg19_v1_chr10_+_23384507 AF151889 BC066305 AF122004 EU446941	240417	+	AB463998 NM_178161	337392	+	BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##AK295718|LOC100289455|100289455|uncharacterized LOC100289455##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3##BC117471|MSRB2|22921|methionine sulfoxide reductase B2##BC130380|MSRB2|22921|methionine sulfoxide reductase B2##NM_012228|MSRB2|22921|methionine sulfoxide reductase B2##BC018030|MSRB2|22921|methionine sulfoxide reductase B2##AF151889|MSRB2|22921|methionine sulfoxide reductase B2##BC066305|MSRB2|22921|methionine sulfoxide reductase B2##AF122004|MSRB2|22921|methionine sulfoxide reductase B2##EU446941|MSRB2|22921|methionine sulfoxide reductase B2##NM_178161|PTF1A|256297|pancreas specific transcription factor, 1a	0.594004	CTCF.p2:35:0.594
chr12	76328491	76328611	reg1033231.p2	3.923	+	BC005225 TSC_hg19_v1_chr12_-_75905414 NM_007043	-423132	-	BC033887 TSC_hg19_v1_chr12_-_75905393 BC014034 BC026107	-423156	-	AK022133 TSC_hg19_v1_chr12_-_75905382 BC016778 U55766	-423166	-	AF220656 TSC_hg19_v1_chr12_-_76424608	95996	-	TSC_hg19_v1_chr12_-_76425369 BC126425 BC130427 BC110820 U92983 BC018929	96739	-	TSC_hg19_v1_chr12_-_76425376 AK304224 AB587598 NM_007350 Z50194	96976	-	BC005225|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##NM_007043|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC033887|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC014034|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC026107|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK022133|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC016778|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##U55766|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AF220656|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC126425|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC130427|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC110820|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##U92983|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC018929|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##AK304224|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##NM_007350|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##Z50194|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1	0.0	
chr16	9127327	9127419	reg1018982.p1	3.923	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-70078	-	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	-164513	-	NM_001042476 BC001333	-165121	-	TSC_hg19_v1_chr16_+_9185545 NM_014117	58167	+	TSC_hg19_v1_chr16_+_9185577 BC113570	58230	+	BC143273 U09002 NM_001134408	1148460	-	NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##BC113570|C16orf72|29035|chromosome 16 open reading frame 72##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.0	
chr17	69881923	69882052	reg1034056.p1	3.923	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-1716291	+	BC033038 NM_170742	-1780993	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-1810557	+	TSC_hg19_v1_chr17_-_70116937 AL833139	234951	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	235172	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	235183	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.0	
chr18	23963957	23964027	reg1008967.p2	3.923	+	TSC_hg19_v1_chr18_+_23806444 NM_005640 AB234096	-157575	+	BC042820 NM_001025096 NM_001025097 NM_144662 BC025393 BC028371 BC028686 BC025389 BC047355 BC021713	-250144	+	AB527567 EU832762 GQ129305 AB300354 AB300355 AB300356 AB300357 AF230662 AF244972 AF257500 AF343880 BC096221 BC096222 BC096223 BC096224 CR542088 CR542103 X79201 TSC_hg19_v1_chr18_-_23670574 AK304305 AK316302 AK316338 AK299082 AK307923 AK289510 NM_001007559 NM_005637 AK301504	-293412	-	NM_001142730 TSC_hg19_v1_chr18_-_24128518	164518	-	AK289870 BC063652 TSC_hg19_v1_chr18_-_24129261 NM_001136205	165249	-	AF542549 NM_198991	256315	-	NM_005640|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##AB234096|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##EU832762|SS18|6760|synovial sarcoma translocation, chromosome 18##GQ129305|SS18|6760|synovial sarcoma translocation, chromosome 18##AF244972|SS18|6760|synovial sarcoma translocation, chromosome 18##AF343880|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096221|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096222|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096223|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096224|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542088|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542103|SS18|6760|synovial sarcoma translocation, chromosome 18##X79201|SS18|6760|synovial sarcoma translocation, chromosome 18##AK304305|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316302|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316338|SS18|6760|synovial sarcoma translocation, chromosome 18##AK299082|SS18|6760|synovial sarcoma translocation, chromosome 18##AK307923|SS18|6760|synovial sarcoma translocation, chromosome 18##AK289510|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001007559|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_005637|SS18|6760|synovial sarcoma translocation, chromosome 18##AK301504|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001142730|KCTD1|284252|potassium channel tetramerisation domain containing 1##AK289870|KCTD1|284252|potassium channel tetramerisation domain containing 1##BC063652|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_001136205|KCTD1|284252|potassium channel tetramerisation domain containing 1##AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1	0.0	
chr19	40404440	40404587	reg1006628.p2	3.923	+	AK296950 TSC_hg19_v1_chr19_-_40337020 NM_001436	-67478	-	TSC_hg19_v1_chr19_-_40337007 BC019260 AK308649	-67507	-	AB463635 M59849 TSC_hg19_v1_chr19_-_40336992	-67545	-	D84239 NM_003890	36019	-	TSC_hg19_v1_chr19_+_40477090 AF020736 AK313183 NM_006503 NM_153001 BC010396 AK310135 AF038965 BC000343 BC014488 BC018811 U27515 AK290285 DQ891875 DQ894876 BT007232 CU679695	72557	+	NM_178544 AK122968 AK292528 BC045649	98472	+	AK296950|FBL|2091|fibrillarin##NM_001436|FBL|2091|fibrillarin##BC019260|FBL|2091|fibrillarin##AK308649|FBL|2091|fibrillarin##M59849|FBL|2091|fibrillarin##D84239|FCGBP|8857|Fc fragment of IgG binding protein##NM_003890|FCGBP|8857|Fc fragment of IgG binding protein##AF020736|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK313183|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_006503|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_153001|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC010396|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK310135|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AF038965|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC000343|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC014488|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BC018811|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##U27515|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##AK290285|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##DQ891875|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##DQ894876|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##BT007232|PSMC4|5704|proteasome (prosome, macropain) 26S subunit, ATPase, 4##NM_178544|ZNF546|339327|zinc finger protein 546##AK122968|ZNF546|339327|zinc finger protein 546##AK292528|ZNF546|339327|zinc finger protein 546##BC045649|ZNF546|339327|zinc finger protein 546	0.519822	CTCF.p2:-6:0.520
chr19	49416615	49416713	reg1040015.p2	3.923	+	TSC_hg19_v1_chr19_+_49403608 BX647291	-13054	+	TSC_hg19_v1_chr19_+_49403601 AK315422 BX647718 AK303126 AK222805 M96824	-13080	+	AK292066 NM_006184	-13358	+	BC032730 NM_014475 DQ890882 DQ894036 CU689512 AB021933	20294	+	TSC_hg19_v1_chr19_+_49458118 NM_004324 NM_138761 NM_138763 NM_138764	41412	+	TSC_hg19_v1_chr19_+_49458150 BC014175 AK291076	41475	+	BX647291|NUCB1|4924|nucleobindin 1##AK315422|NUCB1|4924|nucleobindin 1##BX647718|NUCB1|4924|nucleobindin 1##AK303126|NUCB1|4924|nucleobindin 1##AK222805|NUCB1|4924|nucleobindin 1##M96824|NUCB1|4924|nucleobindin 1##AK292066|NUCB1|4924|nucleobindin 1##NM_006184|NUCB1|4924|nucleobindin 1##BC032730|DHDH|27294|dihydrodiol dehydrogenase (dimeric)##NM_014475|DHDH|27294|dihydrodiol dehydrogenase (dimeric)##DQ890882|DHDH|27294|dihydrodiol dehydrogenase (dimeric)##DQ894036|DHDH|27294|dihydrodiol dehydrogenase (dimeric)##AB021933|DHDH|27294|dihydrodiol dehydrogenase (dimeric)##NM_004324|BAX|581|BCL2-associated X protein##NM_138761|BAX|581|BCL2-associated X protein##NM_138763|BAX|581|BCL2-associated X protein##NM_138764|BAX|581|BCL2-associated X protein##BC014175|BAX|581|BCL2-associated X protein##AK291076|BAX|581|BCL2-associated X protein	0.058293	
chr5	98107353	98107514	reg1034894.p2	3.923	+	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-2392	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-1588446	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-1588491	-	BC054860 BC117134 NM_001270 AF006513	154795	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	1763640	+	AF529367 TSC_hg19_v1_chr5_+_99871306	1763837	+	BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A	0.01674	
chr8	134784244	134784347	reg1028325.p2	3.923	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-200198	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-474798	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-580965	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	924499	-	TSC_hg19_v1_chr8_-_135725053 AB463359	940784	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	940979	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.777383	CTCF.p2:40:0.777
chr10	70784301	70784452	reg1029651.p2	3.922	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-35841	+	BC104671 NM_004728 TSC_hg19_v1_chr10_+_70715925 BC009432 U41387 AK315585 BC008071 BC004182 BC017228 AB527408 CU675917	-68444	+	TSC_hg19_v1_chr10_+_70661097 CU674120 DQ892547 DQ895758	-123259	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	63460	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	63508	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	99515	+	NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##BC104671|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##NM_004728|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC009432|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##U41387|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##AK315585|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC008071|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC004182|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC017228|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##DQ892547|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##DQ895758|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##NM_002727|SRGN|5552|serglycin##D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.0	
chr13	52367806	52367987	reg1030675.p1	3.922	+	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-209161	+	TSC_hg19_v1_chr13_+_52158639 BC014004	-209255	+	AK309815 TSC_hg19_v1_chr13_+_52158630	-209263	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	10379	-	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	68298	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	217654	-	AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##BC014004|WDFY2|115825|WD repeat and FYVE domain containing 2##AK309815|WDFY2|115825|WD repeat and FYVE domain containing 2##BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide	0.0	
chr22	44421477	44421579	reg1032985.p1	3.922	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	-1329	+	AF303887 NM_001003828	-26438	+	TSC_hg19_v1_chr22_+_44351384 AY189688 AF151809 BC007830 AK222657 BC015200 AK297770 AK312773 CR456483 CU013033 CU013321 AB463278 DQ893124 DQ896401 CU677235	-70134	+	AK308443 NM_001243386	655	+	BC039811 NM_001243385	43468	+	NM_001137605 AK309348 AK293360	147328	+	NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##AF303887|PARVB|29780|parvin, beta##NM_001003828|PARVB|29780|parvin, beta##AY189688|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AF151809|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC007830|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK222657|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC015200|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK297770|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK312773|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CR456483|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013033|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013321|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ893124|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ896401|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta##BC039811|PARVB|29780|parvin, beta##NM_001243385|PARVB|29780|parvin, beta##NM_001137605|PARVG|64098|parvin, gamma##AK309348|PARVG|64098|parvin, gamma##AK293360|PARVG|64098|parvin, gamma	0.0	
chr2	87644249	87644429	reg1030253.p1	3.922	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	-341007	-	BC107767 BC109248 BC070296 BC005379 NM_001032392 M93143 NM_002665 BC022294	-395381	-	CR749330 NM_001024457	-499602	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	110678	+	TSC_hg19_v1_chr2_+_87755060 AK312010	110721	+	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	403280	+	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC107767|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC022294|PLGLB2|5342|plasminogen-like B2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1	0.0	
chr4	129783605	129783714	reg1004233.p1	3.922	+	TSC_hg19_v1_chr4_+_129732427 BC032376	-51206	+	TSC_hg19_v1_chr4_+_129730875 NM_024900 NM_199320 AK027620 AF520952 AK304815 AK127326	-52789	+	AK131272 NM_006320	-573676	-	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	230931	-	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	231208	+	NM_001099783	233622	+	BC032376|PHF17|79960|PHD finger protein 17##NM_024900|PHF17|79960|PHD finger protein 17##NM_199320|PHF17|79960|PHD finger protein 17##AK027620|PHF17|79960|PHD finger protein 17##AF520952|PHF17|79960|PHD finger protein 17##AK304815|PHF17|79960|PHD finger protein 17##AK127326|PHF17|79960|PHD finger protein 17##AK131272|PGRMC2|10424|progesterone receptor membrane component 2##NM_006320|PGRMC2|10424|progesterone receptor membrane component 2##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33	0.0	
chr5	136386986	136387129	reg1044099.p1	3.922	+	NM_001167576 NM_001167577 NM_020389	-685894	-	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-918473	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-918528	+	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	447184	-	TSC_hg19_v1_chr5_-_136834420 AK094489	447370	-	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	447923	-	NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.0	
chr6	112045750	112045889	reg1029891.p1	3.922	+	AB451293 AB451426 AB528738 CU689398 S74774 NM_153047	-4561	-	NM_001164281 NM_147686	-118346	-	TSC_hg19_v1_chr6_-_111927082 AL050289 AK310141 AF136406 AF136407	-118647	-	BC032496 NM_153048	34489	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	148716	-	TSC_hg19_v1_chr6_-_112194648 NM_002037	148836	-	AB451293|FYN|2534|FYN oncogene related to SRC, FGR, YES##AB451426|FYN|2534|FYN oncogene related to SRC, FGR, YES##S74774|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153047|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_001164281|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_147686|TRAF3IP2|10758|TRAF3 interacting protein 2##AL050289|TRAF3IP2|10758|TRAF3 interacting protein 2##AK310141|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136406|TRAF3IP2|10758|TRAF3 interacting protein 2##AF136407|TRAF3IP2|10758|TRAF3 interacting protein 2##BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_002037|FYN|2534|FYN oncogene related to SRC, FGR, YES	0.0	
chr8	11594016	11594108	reg1029626.p1	3.922	+	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	-32342	+	S76617 NM_001715 BC018703 BC004473 BC038555	-242469	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-269833	-	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	33206	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	66122	+	TSC_hg19_v1_chr8_+_11660249 AK296043 AK315993 AK311246 X69141 AK301617	66176	+	NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##AK296043|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##AK315993|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##AK311246|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##X69141|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1##AK301617|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.987508	CTCF.p2:12:0.988
chr10	102099010	102099191	reg1001139.p3	3.921	+	AF073481 NM_001253837 NM_016112	-8858	-	AY531265 AB463442 TSC_hg19_v1_chr10_-_102046438 AB593084 AK298969 NM_173809	-52662	-	BC020494 AY278457 AK054697 NM_001001342	-53070	-	NM_005063 TSC_hg19_v1_chr10_+_102106877 AB032261 BC062303	7741	+	TSC_hg19_v1_chr10_+_102106989 AK312312	7875	+	TSC_hg19_v1_chr10_+_102107054 AB208982 AF097514 AK222862 Y13647	7929	+	AF073481|PKD2L1|9033|polycystic kidney disease 2-like 1##NM_001253837|PKD2L1|9033|polycystic kidney disease 2-like 1##NM_016112|PKD2L1|9033|polycystic kidney disease 2-like 1##AY531265|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AB593084|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AK298969|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_173809|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##BC020494|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AY278457|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##AK054697|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_001001342|BLOC1S2|282991|biogenesis of lysosomal organelles complex-1, subunit 2##NM_005063|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AB032261|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##BC062303|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AK312312|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AB208982|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AF097514|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##AK222862|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)##Y13647|SCD|6319|stearoyl-CoA desaturase (delta-9-desaturase)	0.0	
chr11	11898196	11898293	reg1032514.p1	3.921	+	TSC_hg19_v1_chr11_+_11863521 BC071559 AK027362 AK092290 AX747455	-34676	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	-34753	+	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	-35228	+	AY587550 DQ892906 DQ896157 AK295441 AK225156 TSC_hg19_v1_chr11_-_12030174 AB033421 AF177396 AK092979 AK098756 NM_001018057	131912	-	TSC_hg19_v1_chr11_-_12030604 AB034203	132330	-	TSC_hg19_v1_chr11_-_12030622 BC007660 NM_015881	132381	-	BC071559|USP47|55031|ubiquitin specific peptidase 47##AK027362|USP47|55031|ubiquitin specific peptidase 47##AK092290|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AY587550|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##DQ892906|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##DQ896157|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK295441|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK225156|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AB033421|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AF177396|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK092979|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK098756|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_001018057|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AB034203|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##BC007660|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_015881|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)	0.243458	CTCF.p2:-21:0.243
chr12	92865505	92865632	reg1035793.p2	3.921	+	AJ845168 NM_001025232	-43645	-	AJ845165 AJ845166 NM_001025233	-47834	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-325925	-	NM_001037671 NM_001178097	231050	+	NM_001004330 AK128530	264719	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	457370	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr19	17535934	17536051	reg1033742.p1	3.921	+	TSC_hg19_v1_chr19_+_17530872 BC011840 NM_138401 BC007883	-5093	+	TSC_hg19_v1_chr19_+_17530855 AK057057 AK289487	-5144	+	AK311380 AK055623 TSC_hg19_v1_chr19_+_17516630	-19426	+	NM_001190844	23383	-	BC014127 NM_138454 DQ426894	35751	-	AK294238 TSC_hg19_v1_chr19_+_17579599	43596	+	BC011840|FAM125A|93343|family with sequence similarity 125, member A##NM_138401|FAM125A|93343|family with sequence similarity 125, member A##BC007883|FAM125A|93343|family with sequence similarity 125, member A##AK057057|FAM125A|93343|family with sequence similarity 125, member A##AK289487|FAM125A|93343|family with sequence similarity 125, member A##AK311380|LOC100507535|100507535|uncharacterized LOC100507535##AK055623|LOC100507535|100507535|uncharacterized LOC100507535##NM_001190844|TMEM221|100130519|transmembrane protein 221##BC014127|NXNL1|115861|nucleoredoxin-like 1##NM_138454|NXNL1|115861|nucleoredoxin-like 1##DQ426894|NXNL1|115861|nucleoredoxin-like 1##AK294238|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1	0.0	
chr19	40217780	40217885	reg1035518.p2	3.921	+	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	-22789	+	FJ613352 NM_001190441	-71287	+	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	-124647	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	10807	-	NM_001143832	49401	+	TSC_hg19_v1_chr19_-_40324779 AF205861 BC025291 AK074971 BC009688 AK302127 BC018751 NM_004714 NM_006483 NM_006484 Y17999	106966	-	AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##NM_001143832|LEUTX|342900|leucine twenty homeobox##AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B	0.0	
chr21	39993163	39993256	reg1036088.p1	3.921	+	M21535 NM_001243429	-36364	-	AB489170 AM392572 CU691828 EU446470 AK304662 AK303518 BC040168 AK300395 NM_001136155 NM_182918	-122844	-	NM_170737	-348781	+	TSC_hg19_v1_chr21_-_40032563 AK309469 NM_001243428	39367	-	AY204740 AY204741 AY204742 AY204743 NM_001243432 TSC_hg19_v1_chr21_-_40033677 AK297807 NM_001136154 NM_004449	40451	-	J04102 TSC_hg19_v1_chr21_+_40177830	184588	+	M21535|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243429|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AM392572|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##EU446470|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK304662|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK303518|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##BC040168|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK300395|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136155|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_182918|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_170737|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK309469|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243428|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204740|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204741|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204742|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204743|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243432|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK297807|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136154|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_004449|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##J04102|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)	0.123214	
chr5	41870272	41870452	reg1036631.p1	3.921	+	AB464014 TSC_hg19_v1_chr5_-_41510701 AK127142 BX648329 NM_001005473	-359684	-	BC035723 NM_001115131	-608823	-	J05024 J04506 AK292509 TSC_hg19_v1_chr5_-_41213635 J05064 AK313673 NM_000065	-656773	-	AB528366 CR457049 CU679223 DQ891805 DQ894989 TSC_hg19_v1_chr5_-_41870488 AK312327	112	-	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	221	-	TSC_hg19_v1_chr5_-_41870706 NM_000436	384	-	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BC035723|C6|729|complement component 6##NM_001115131|C6|729|complement component 6##J05024|C6|729|complement component 6##J04506|C6|729|complement component 6##AK292509|C6|729|complement component 6##J05064|C6|729|complement component 6##AK313673|C6|729|complement component 6##NM_000065|C6|729|complement component 6##CR457049|OXCT1|5019|3-oxoacid CoA transferase 1##DQ891805|OXCT1|5019|3-oxoacid CoA transferase 1##DQ894989|OXCT1|5019|3-oxoacid CoA transferase 1##AK312327|OXCT1|5019|3-oxoacid CoA transferase 1##BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1	0.079177	
chr9	139923359	139923519	reg1013172.p1	3.921	+	TSC_hg19_v1_chr9_-_139923225 BC144588 BC144589 NM_212533	-146	-	TSC_hg19_v1_chr9_-_139922765 NM_001606	-687	-	AB384556 AF327657 BC029282 BC064542 BC090860 TSC_hg19_v1_chr9_-_139922684 AK308738 AF178941	-800	-	BC086312 NM_004479	3852	-	HQ258737 TSC_hg19_v1_chr9_+_139927632 AK093587 AX748216	4135	+	TSC_hg19_v1_chr9_-_139940543 AK225091 AF272357	17070	-	BC144588|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC144589|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##NM_212533|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##NM_001606|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##AF327657|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC029282|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC064542|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC090860|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##AK308738|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##AF178941|ABCA2|20|ATP-binding cassette, sub-family A (ABC1), member 2##BC086312|FUT7|2529|fucosyltransferase 7 (alpha (1,3) fucosyltransferase)##NM_004479|FUT7|2529|fucosyltransferase 7 (alpha (1,3) fucosyltransferase)##HQ258737|C9orf139|401563|chromosome 9 open reading frame 139##AK093587|C9orf139|401563|chromosome 9 open reading frame 139##AK225091|NPDC1|56654|neural proliferation, differentiation and control, 1##AF272357|NPDC1|56654|neural proliferation, differentiation and control, 1	0.125198	
chrX	1627079	1627259	reg1028496.p2	3.921	+	AK301844 NM_001173473	-54518	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-55368	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-116200	-	BC043610 GQ280263 NM_178129 AK126147	28869	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	83360	+	NM_004043 U11090	87178	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.407424	CTCF.p2:85:0.407
chr10	106382512	106382633	reg1031378.p1	3.920	+	TSC_hg19_v1_chr10_+_106113521 BC036225 NM_001008723 BX641120 AK093227 AX748000 BC109126	-269031	+	AB051541 TSC_hg19_v1_chr10_-_106098200 AK129877	-284383	-	BC070108 NM_033397	-288910	-	AB028982 NM_014978	18286	+	BC117417 TSC_hg19_v1_chr10_+_106401047	18473	+	TSC_hg19_v1_chr10_-_108459000 AK123752	2076487	-	BC036225|CCDC147|159686|coiled-coil domain containing 147##NM_001008723|CCDC147|159686|coiled-coil domain containing 147##BX641120|CCDC147|159686|coiled-coil domain containing 147##AK093227|CCDC147|159686|coiled-coil domain containing 147##BC109126|CCDC147|159686|coiled-coil domain containing 147##AB051541|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##BC070108|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##NM_033397|ITPRIP|85450|inositol 1,4,5-trisphosphate receptor interacting protein##AB028982|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##NM_014978|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1	0.972987	CTCF.p2:-7:0.973
chr10	82290120	82290254	reg1035671.p1	3.920	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-76083	+	TSC_hg19_v1_chr10_+_82214071 AF311903	-76116	+	AK074558 AK295321 AL136638 TSC_hg19_v1_chr10_+_82214066	-76119	+	AK123885 NM_207372	7470	+	AK123978 NM_001145719	10387	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	1344895	+	BC002920|TSPAN14|81619|tetraspanin 14##AF311903|TSPAN14|81619|tetraspanin 14##AK074558|TSPAN14|81619|tetraspanin 14##AK295321|TSPAN14|81619|tetraspanin 14##AL136638|TSPAN14|81619|tetraspanin 14##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3	0.301472	CTCF.p2:9:0.212
chr11	1108907	1109055	reg1010178.p2	3.920	+	TSC_hg19_v1_chr11_+_1074873 L21998 NM_002457	-34109	+	AY458429 AY312160 NM_005961 TSC_hg19_v1_chr11_-_1036715	-72295	-	TSC_hg19_v1_chr11_-_1017140 AK096772	-91774	-	TSC_hg19_v1_chr11_+_1151579 AF015521 AJ298317 AF043909	42605	+	TSC_hg19_v1_chr11_+_1213469 Z48314	104493	+	TSC_hg19_v1_chr11_+_1244295 NM_002458 AK310939	135315	+	L21998|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##NM_002457|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##AY458429|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AY312160|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##NM_005961|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AK096772|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AF015521|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AJ298317|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AF043909|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##Z48314|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##NM_002458|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##AK310939|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming	0.0	
chr11	129245956	129246050	reg1034431.p1	3.920	+	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	-122	+	EF127492 NM_001142685	-183911	-	AB018255 AY194287 TSC_hg19_v1_chr11_-_128894084 AB079856 NM_014715	-351942	-	TSC_hg19_v1_chr11_+_129685744 AK098106 NM_138788 AK290283 AK292058	439741	+	NM_006165 X80878	516900	-	TSC_hg19_v1_chr11_-_129765453 BC063280	519439	-	AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2##EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##AB018255|ARHGAP32|9743|Rho GTPase activating protein 32##AY194287|ARHGAP32|9743|Rho GTPase activating protein 32##AB079856|ARHGAP32|9743|Rho GTPase activating protein 32##NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32##AK098106|TMEM45B|120224|transmembrane protein 45B##NM_138788|TMEM45B|120224|transmembrane protein 45B##AK290283|TMEM45B|120224|transmembrane protein 45B##AK292058|TMEM45B|120224|transmembrane protein 45B##NM_006165|NFRKB|4798|nuclear factor related to kappaB binding protein##X80878|NFRKB|4798|nuclear factor related to kappaB binding protein##BC063280|NFRKB|4798|nuclear factor related to kappaB binding protein	0.0	
chr1	151021090	151021205	reg1036496.p1	3.920	+	TSC_hg19_v1_chr1_+_151020221 AK301712 AY358436 AK315680 AK000526 BC002469 NM_017860	-900	+	NM_001159642 NM_138278 AY033000 BC027868 AK092595 AX747620 AF193056	-12088	+	TSC_hg19_v1_chr1_+_150980936 AK315120 AF051907 AF123538 BC014886 BC025304 NM_021222 AF123539 AK294154 BC063481 DQ892819 DQ896065 AB528544	-40146	+	TSC_hg19_v1_chr1_-_151032050 AF187845 AF286592	10896	-	TSC_hg19_v1_chr1_-_151032111 BC041604 AK054914 NM_001038707 NM_020239	10956	-	NM_006818 AK056089	11005	+	AY358436|C1orf56|54964|chromosome 1 open reading frame 56##AK315680|C1orf56|54964|chromosome 1 open reading frame 56##AK000526|C1orf56|54964|chromosome 1 open reading frame 56##BC002469|C1orf56|54964|chromosome 1 open reading frame 56##NM_017860|C1orf56|54964|chromosome 1 open reading frame 56##NM_001159642|BNIPL|149428|BCL2/adenovirus E1B 19kD interacting protein like##NM_138278|BNIPL|149428|BCL2/adenovirus E1B 19kD interacting protein like##AY033000|BNIPL|149428|BCL2/adenovirus E1B 19kD interacting protein like##BC027868|BNIPL|149428|BCL2/adenovirus E1B 19kD interacting protein like##AK092595|BNIPL|149428|BCL2/adenovirus E1B 19kD interacting protein like##AF193056|BNIPL|149428|BCL2/adenovirus E1B 19kD interacting protein like##AK315120|PRUNE|58497|prune homolog (Drosophila)##AF051907|PRUNE|58497|prune homolog (Drosophila)##AF123538|PRUNE|58497|prune homolog (Drosophila)##BC014886|PRUNE|58497|prune homolog (Drosophila)##BC025304|PRUNE|58497|prune homolog (Drosophila)##NM_021222|PRUNE|58497|prune homolog (Drosophila)##AF123539|PRUNE|58497|prune homolog (Drosophila)##AK294154|PRUNE|58497|prune homolog (Drosophila)##BC063481|PRUNE|58497|prune homolog (Drosophila)##DQ892819|PRUNE|58497|prune homolog (Drosophila)##DQ896065|PRUNE|58497|prune homolog (Drosophila)##AF187845|CDC42SE1|56882|CDC42 small effector 1##AF286592|CDC42SE1|56882|CDC42 small effector 1##BC041604|CDC42SE1|56882|CDC42 small effector 1##NM_001038707|CDC42SE1|56882|CDC42 small effector 1##NM_020239|CDC42SE1|56882|CDC42 small effector 1##NM_006818|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11##AK056089|MLLT11|10962|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 11	0.028237	
chr12	52709662	52709748	reg1032830.p2	3.920	+	NM_002284 BC069585 CU686916 X99142	-14027	+	AB527612 HQ258431 BC117465 BC117467 NM_002281	-24432	-	TSC_hg19_v1_chr12_+_52627029 AK025881 AK128848 AF509887 AJ238246 X03212 AK128505 AK225498 BC002700 DQ892996 DQ896244 AB590146 CU678130	-82662	+	BC126935 BC128063 BC069546 X99141 AK314904 NM_002282	5455	-	X99140 NM_002283	51576	-	AJ628420 BC069647 NM_033045 AK314030	69693	-	NM_002284|KRT86|3892|keratin 86##BC069585|KRT86|3892|keratin 86##X99142|KRT86|3892|keratin 86##HQ258431|KRT81|3887|keratin 81##BC117465|KRT81|3887|keratin 81##BC117467|KRT81|3887|keratin 81##NM_002281|KRT81|3887|keratin 81##AK025881|KRT7|3855|keratin 7##AK128848|KRT7|3855|keratin 7##AF509887|KRT7|3855|keratin 7##AJ238246|KRT7|3855|keratin 7##X03212|KRT7|3855|keratin 7##AK128505|KRT7|3855|keratin 7##AK225498|KRT7|3855|keratin 7##BC002700|KRT7|3855|keratin 7##DQ892996|KRT7|3855|keratin 7##DQ896244|KRT7|3855|keratin 7##BC126935|KRT83|3889|keratin 83##BC128063|KRT83|3889|keratin 83##BC069546|KRT83|3889|keratin 83##X99141|KRT83|3889|keratin 83##AK314904|KRT83|3889|keratin 83##NM_002282|KRT83|3889|keratin 83##X99140|KRT85|3891|keratin 85##NM_002283|KRT85|3891|keratin 85##AJ628420|KRT84|3890|keratin 84##BC069647|KRT84|3890|keratin 84##NM_033045|KRT84|3890|keratin 84##AK314030|KRT84|3890|keratin 84	0.773131	CTCF.p2:4:0.773
chr12	92899417	92899597	reg1025514.p2	3.920	+	AJ845168 NM_001025232	-77584	-	AJ845165 AJ845166 NM_001025233	-81773	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-359864	-	NM_001037671 NM_001178097	197111	+	NM_001004330 AK128530	230780	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	423431	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr1	46216188	46216369	reg1023892.p1	3.920	+	NM_016486 TSC_hg19_v1_chr1_+_46153865 AK024682 AK308613 BC104636 BC064539 BC013608 AF151063 BC034147 BC046130 BC121117 BC133692	-62403	+	TSC_hg19_v1_chr1_-_46152195 BC068578 NM_021639	-64036	-	BC128177 BC128178 BC029888 BC065201 BC110988 AK310879 AK057646 AK303939 AK298104 NM_001114938 NM_001190182	-126594	-	BC032544 TSC_hg19_v1_chr1_-_46216325 AK023880 NM_001145349 NM_005897	121	-	TSC_hg19_v1_chr1_+_46269283 AB047005 NM_015112 BC065499	53020	+	TSC_hg19_v1_chr1_+_46379267 AK027123 AK309510	162984	+	NM_016486|TMEM69|51249|transmembrane protein 69##AK024682|TMEM69|51249|transmembrane protein 69##BC104636|TMEM69|51249|transmembrane protein 69##BC064539|TMEM69|51249|transmembrane protein 69##BC013608|TMEM69|51249|transmembrane protein 69##AF151063|TMEM69|51249|transmembrane protein 69##BC034147|TMEM69|51249|transmembrane protein 69##BC046130|TMEM69|51249|transmembrane protein 69##BC121117|TMEM69|51249|transmembrane protein 69##BC133692|TMEM69|51249|transmembrane protein 69##BC068578|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1##NM_021639|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1##BC128177|CCDC17|149483|coiled-coil domain containing 17##BC128178|CCDC17|149483|coiled-coil domain containing 17##BC029888|CCDC17|149483|coiled-coil domain containing 17##BC065201|CCDC17|149483|coiled-coil domain containing 17##BC110988|CCDC17|149483|coiled-coil domain containing 17##AK310879|CCDC17|149483|coiled-coil domain containing 17##AK057646|CCDC17|149483|coiled-coil domain containing 17##AK303939|CCDC17|149483|coiled-coil domain containing 17##AK298104|CCDC17|149483|coiled-coil domain containing 17##NM_001114938|CCDC17|149483|coiled-coil domain containing 17##NM_001190182|CCDC17|149483|coiled-coil domain containing 17##BC032544|IPP|3652|intracisternal A particle-promoted polypeptide##AK023880|IPP|3652|intracisternal A particle-promoted polypeptide##NM_001145349|IPP|3652|intracisternal A particle-promoted polypeptide##NM_005897|IPP|3652|intracisternal A particle-promoted polypeptide##AB047005|MAST2|23139|microtubule associated serine/threonine kinase 2##NM_015112|MAST2|23139|microtubule associated serine/threonine kinase 2##BC065499|MAST2|23139|microtubule associated serine/threonine kinase 2##AK027123|MAST2|23139|microtubule associated serine/threonine kinase 2##AK309510|MAST2|23139|microtubule associated serine/threonine kinase 2	0.0	
chr14	93700224	93700404	reg1001312.p1	3.920	+	TSC_hg19_v1_chr14_+_93673628 AB590826 BC051819 BX248249	-26680	+	BC017013 TSC_hg19_v1_chr14_+_93673625	-26690	+	TSC_hg19_v1_chr14_+_93673600 BC015046 AK315492	-26718	+	TSC_hg19_v1_chr14_-_93799368 AB040958 AK001510	99051	-	TSC_hg19_v1_chr14_-_93799376 AK291422 BC141850 BX248762 NM_001002860 NM_018167 BC047071	99090	-	AK125327 NM_020818	99250	+	BC051819|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BX248249|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BC017013|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##BC015046|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##AK315492|UBR7|55148|ubiquitin protein ligase E3 component n-recognin 7 (putative)##AB040958|BTBD7|55727|BTB (POZ) domain containing 7##AK001510|BTBD7|55727|BTB (POZ) domain containing 7##AK291422|BTBD7|55727|BTB (POZ) domain containing 7##BC141850|BTBD7|55727|BTB (POZ) domain containing 7##BX248762|BTBD7|55727|BTB (POZ) domain containing 7##NM_001002860|BTBD7|55727|BTB (POZ) domain containing 7##NM_018167|BTBD7|55727|BTB (POZ) domain containing 7##BC047071|BTBD7|55727|BTB (POZ) domain containing 7##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)	0.0	
chr17	38083743	38083923	reg1033483.p1	3.920	+	TSC_hg19_v1_chr17_-_38083855 AF373101 BC071833 AX775843 AK075212 BC017087 AF395708 AF373102 AK074811 NM_139280	-1	-	BC054042 BC050710 AF151043 BC000638 BC018837 TSC_hg19_v1_chr17_-_38078103	-5827	-	AK000409 AK296607 NM_001042471 NM_001165958 NM_001165959	-8961	-	NM_001195545	13893	+	AK096439 NM_178171 BC109197	35411	+	TSC_hg19_v1_chr17_+_38137059 AK054611 AK094206 AK293539 AK300973 NM_002809 BC001684 BC012302	53232	+	AF373101|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC071833|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AX775843|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK075212|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC017087|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF395708|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF373102|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK074811|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##NM_139280|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC054042|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC050710|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF151043|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC000638|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC018837|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK000409|GSDMB|55876|gasdermin B##AK296607|GSDMB|55876|gasdermin B##NM_001042471|GSDMB|55876|gasdermin B##NM_001165958|GSDMB|55876|gasdermin B##NM_001165959|GSDMB|55876|gasdermin B##NM_001195545|LRRC3C|100505591|leucine rich repeat containing 3C##AK096439|GSDMA|284110|gasdermin A##NM_178171|GSDMA|284110|gasdermin A##BC109197|GSDMA|284110|gasdermin A##AK054611|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK094206|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK293539|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK300973|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##NM_002809|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC012302|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	0.0	
chr17	42175668	42175762	reg1036750.p1	3.920	+	NM_138387 TSC_hg19_v1_chr17_+_42148102 BC021574 BC062596 AK091417 AX746969 BC002494	-27516	+	BC066298 NM_152344	-30729	-	TSC_hg19_v1_chr17_-_42144008 AK055218 BC044587 BC105288	-31699	-	TSC_hg19_v1_chr17_-_42201007 AK294760 AB011172	25267	-	TSC_hg19_v1_chr17_-_42201010 NM_001015053 NM_005474	25301	-	TSC_hg19_v1_chr17_+_42219297 NM_001171251 NM_024032 AK291924	43551	+	NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC066298|LSM12|124801|LSM12 homolog (S. cerevisiae)##NM_152344|LSM12|124801|LSM12 homolog (S. cerevisiae)##AK055218|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC044587|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC105288|LSM12|124801|LSM12 homolog (S. cerevisiae)##AK294760|HDAC5|10014|histone deacetylase 5##AB011172|HDAC5|10014|histone deacetylase 5##NM_001015053|HDAC5|10014|histone deacetylase 5##NM_005474|HDAC5|10014|histone deacetylase 5##NM_001171251|C17orf53|78995|chromosome 17 open reading frame 53##NM_024032|C17orf53|78995|chromosome 17 open reading frame 53##AK291924|C17orf53|78995|chromosome 17 open reading frame 53	0.985396	CTCF.p2:2:0.891
chr2	226535240	226535354	reg1037504.p1	3.920	+	NM_020864 BC131727 AB040919	-269652	+	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	-627949	-	TSC_hg19_v1_chr2_-_225811768 EU236710	-723543	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	1128182	-	TSC_hg19_v1_chr2_-_227664534 S62539	1129202	-	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	1165433	+	NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##EU236710|DOCK10|55619|dedicator of cytokinesis 10##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##S62539|IRS1|3667|insulin receptor substrate 1##NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1	0.119187	
chr4	140105408	140105522	reg1036833.p1	3.920	+	TSC_hg19_v1_chr4_-_140098351 AK311505	-7128	-	U43188 NM_201999	-44862	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	-99854	-	BC037987 BC104173 BC104174 AF329088 AF484960 NM_032623	95950	-	CR457005 AF047184 TSC_hg19_v1_chr4_-_140216970 AF047435 AK291147 BC101798 BC112061	111508	-	BC107682 NM_001184986 NM_001184991 NM_002494	116907	-	U43188|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_201999|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC037987|C4orf49|84709|chromosome 4 open reading frame 49##BC104173|C4orf49|84709|chromosome 4 open reading frame 49##BC104174|C4orf49|84709|chromosome 4 open reading frame 49##AF329088|C4orf49|84709|chromosome 4 open reading frame 49##AF484960|C4orf49|84709|chromosome 4 open reading frame 49##NM_032623|C4orf49|84709|chromosome 4 open reading frame 49##CR457005|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF047184|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF047435|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AK291147|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC101798|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC112061|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC107682|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184986|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184991|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_002494|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa	0.812631	CTCF.p2:-9:0.813
chr8	42150240	42150388	reg1032479.p1	3.920	+	BC090865 TSC_hg19_v1_chr8_+_42128868 AF080158 AK298241 AB209090 BC108694 AK290952 BC144080 BX648165	-21399	+	TSC_hg19_v1_chr8_+_42128835 AK302723 AK303294 AK316418 BC006231 AK091297 AK309052	-21479	+	TSC_hg19_v1_chr8_+_42128832 AK303528	-21487	+	NM_002690 AK223537 TSC_hg19_v1_chr8_+_42196014 BC100288 AK294025 AK314976 D29013 M13140 BC106909 AB464039 CR536503 CR541802 L11607	45743	+	AB017788 BC107046 BC107047 AF177397 NM_014420 AK311714 AK301609	84338	-	NM_001135694 NM_005662 TSC_hg19_v1_chr8_+_42249355	99004	+	BC090865|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AF080158|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK298241|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AB209090|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC108694|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK290952|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC144080|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BX648165|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK302723|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK303294|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK316418|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC006231|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK091297|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK303528|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_002690|POLB|5423|polymerase (DNA directed), beta##AK223537|POLB|5423|polymerase (DNA directed), beta##BC100288|POLB|5423|polymerase (DNA directed), beta##AK294025|POLB|5423|polymerase (DNA directed), beta##AK314976|POLB|5423|polymerase (DNA directed), beta##D29013|POLB|5423|polymerase (DNA directed), beta##M13140|POLB|5423|polymerase (DNA directed), beta##BC106909|POLB|5423|polymerase (DNA directed), beta##CR536503|POLB|5423|polymerase (DNA directed), beta##CR541802|POLB|5423|polymerase (DNA directed), beta##L11607|POLB|5423|polymerase (DNA directed), beta##AB017788|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##BC107046|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##BC107047|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##AF177397|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##NM_014420|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##AK301609|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##NM_001135694|VDAC3|7419|voltage-dependent anion channel 3##NM_005662|VDAC3|7419|voltage-dependent anion channel 3	0.0	
chr8	49891886	49892066	reg1003078.p2	3.920	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-58066	-	AK021829 BC025676 BC029586 AK316037 AK299659 AK307101 NM_001142857 NM_024593	-244183	-	TSC_hg19_v1_chr8_+_48920990 BC016332 BC016710 BC007051 AK313447 U62136 AF049140 BC028673 BC062418 NM_003350	-970995	+	NM_001007176 BC017981 AJ276240	92933	+	AJ003030 NM_018967	932620	+	EU170240 AY877349 NM_144651	2829977	-	EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##AK021829|EFCAB1|79645|EF-hand calcium binding domain 1##BC025676|EFCAB1|79645|EF-hand calcium binding domain 1##BC029586|EFCAB1|79645|EF-hand calcium binding domain 1##AK316037|EFCAB1|79645|EF-hand calcium binding domain 1##AK299659|EFCAB1|79645|EF-hand calcium binding domain 1##AK307101|EFCAB1|79645|EF-hand calcium binding domain 1##NM_001142857|EFCAB1|79645|EF-hand calcium binding domain 1##NM_024593|EFCAB1|79645|EF-hand calcium binding domain 1##BC016332|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC016710|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC007051|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AK313447|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##U62136|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##AF049140|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC028673|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##BC062418|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##NM_003350|UBE2V2|7336|ubiquitin-conjugating enzyme E2 variant 2##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like	0.0	
chrX	32501810	32501900	reg1039786.p1	3.920	+	NM_004011 NM_004012	-71485	-	L35854 NM_004013 NM_004020 NM_004021 NM_004022 NM_004023	-328270	-	NM_004014 S62617	-975441	-	NM_004010 S81419 NM_004009 S64152	644688	-	S60972 X14298 AK309142 TSC_hg19_v1_chrX_-_33229631 M18533 BC010932 NM_004006	727695	-	NM_000109	855870	-	NM_004011|DMD|1756|dystrophin##NM_004012|DMD|1756|dystrophin##L35854|DMD|1756|dystrophin##NM_004013|DMD|1756|dystrophin##NM_004020|DMD|1756|dystrophin##NM_004021|DMD|1756|dystrophin##NM_004022|DMD|1756|dystrophin##NM_004023|DMD|1756|dystrophin##NM_004014|DMD|1756|dystrophin##S62617|DMD|1756|dystrophin##NM_004010|DMD|1756|dystrophin##S81419|DMD|1756|dystrophin##NM_004009|DMD|1756|dystrophin##S64152|DMD|1756|dystrophin##S60972|DMD|1756|dystrophin##X14298|DMD|1756|dystrophin##AK309142|DMD|1756|dystrophin##M18533|DMD|1756|dystrophin##BC010932|DMD|1756|dystrophin##NM_004006|DMD|1756|dystrophin##NM_000109|DMD|1756|dystrophin	0.892343	CTCF.p2:3:0.892
chr11	1859409	1859528	reg1000115.p2	3.919	+	NM_138567 AK075202 BC144657 BC144659 BC144660 BC144661	-3751	+	TSC_hg19_v1_chr11_-_1785210 NM_001909	-74233	-	TSC_hg19_v1_chr11_-_1785158 BC016320 M11233	-74311	-	NM_003282	764	+	BC032148 NM_001145829	1250	+	NM_001145841	1963	+	NM_138567|SYT8|90019|synaptotagmin VIII##AK075202|SYT8|90019|synaptotagmin VIII##BC144657|SYT8|90019|synaptotagmin VIII##BC144659|SYT8|90019|synaptotagmin VIII##BC144660|SYT8|90019|synaptotagmin VIII##BC144661|SYT8|90019|synaptotagmin VIII##NM_001909|CTSD|1509|cathepsin D##BC016320|CTSD|1509|cathepsin D##M11233|CTSD|1509|cathepsin D##NM_003282|TNNI2|7136|troponin I type 2 (skeletal, fast)##BC032148|TNNI2|7136|troponin I type 2 (skeletal, fast)##NM_001145829|TNNI2|7136|troponin I type 2 (skeletal, fast)##NM_001145841|TNNI2|7136|troponin I type 2 (skeletal, fast)	0.0	
chr1	65674893	65675041	reg1011649.p1	3.919	+	TSC_hg19_v1_chr1_+_65613971 BC040224 BC136886 BC136887 BC148270 CR456830 CU688216 DQ892294 DQ895494	-60937	+	TSC_hg19_v1_chr1_+_65613835 NM_013410 AK025926 AK313611 X60673	-61119	+	TSC_hg19_v1_chr1_+_65613263 NM_203464 BC146653 BC016180 AK309057 BC066944 NM_001005353	-61606	+	TSC_hg19_v1_chr1_+_65720144 AK123450 BC051722	45152	+	AK296408 NM_014787 AB007942	55462	+	BC140007 NM_001198683 NM_017526 TSC_hg19_v1_chr1_+_65886266	211235	+	BC040224|AK4|205|adenylate kinase 4##BC136886|AK4|205|adenylate kinase 4##BC136887|AK4|205|adenylate kinase 4##BC148270|AK4|205|adenylate kinase 4##CR456830|AK4|205|adenylate kinase 4##DQ892294|AK4|205|adenylate kinase 4##DQ895494|AK4|205|adenylate kinase 4##NM_013410|AK4|205|adenylate kinase 4##AK025926|AK4|205|adenylate kinase 4##AK313611|AK4|205|adenylate kinase 4##X60673|AK4|205|adenylate kinase 4##NM_203464|AK4|205|adenylate kinase 4##BC146653|AK4|205|adenylate kinase 4##BC016180|AK4|205|adenylate kinase 4##AK309057|AK4|205|adenylate kinase 4##BC066944|AK4|205|adenylate kinase 4##NM_001005353|AK4|205|adenylate kinase 4##AK123450|LOC645195|645195|uncharacterized LOC645195##BC051722|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##BC140007|LEPROT|54741|leptin receptor overlapping transcript##NM_001198683|LEPROT|54741|leptin receptor overlapping transcript##NM_017526|LEPROT|54741|leptin receptor overlapping transcript	0.0	
chr17	65386810	65386931	reg1029122.p1	3.919	+	BC007905 NM_012417 NM_181671	-12947	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-13282	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-13461	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	327180	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	434832	+	AK293224 TSC_hg19_v1_chr17_+_65822221	435347	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.0	
chr19	51320879	51321059	reg1031099.p2	3.919	+	TSC_hg19_v1_chr19_-_51307892 NM_199250 NM_199249	-13050	-	AB463389 NM_033068	-27298	+	BC095544 BC067453 BC067454 NM_001506	-47181	+	BT007253 S77952 DQ893072 DQ896328 AY703451 BC005313 M25629 X13561 AK293363 AY429508 NM_002257	6053	-	AY373373 AY373374 CU686842 CU686864 HQ258133 BC126137 BC144045 BC144046 BC144047 AF303046 BC069480 BC069507 BC069518 NM_017509 NM_138563 NM_138564	13793	-	AF335477 AF335478 AX772834 AX772836 BC005307 NM_001030047 NM_001030048 NM_001030050 NM_001648 S75755 U17040 X05332 BC056665 AJ310937 AJ459784 AJ310938 AK311887 AK312933 AJ459782 AJ459783 AJ512346 M26663 DQ890670 DQ893851 AB463810 CU690730 BT019862 M21895 M21896 M21897	37227	+	NM_199250|C19orf48|84798|chromosome 19 open reading frame 48##NM_199249|C19orf48|84798|chromosome 19 open reading frame 48##NM_033068|ACPT|93650|acid phosphatase, testicular##BC095544|GPR32|2854|G protein-coupled receptor 32##BC067453|GPR32|2854|G protein-coupled receptor 32##BC067454|GPR32|2854|G protein-coupled receptor 32##NM_001506|GPR32|2854|G protein-coupled receptor 32##BT007253|KLK1|3816|kallikrein 1##S77952|KLK1|3816|kallikrein 1##DQ893072|KLK1|3816|kallikrein 1##DQ896328|KLK1|3816|kallikrein 1##AY703451|KLK1|3816|kallikrein 1##BC005313|KLK1|3816|kallikrein 1##M25629|KLK1|3816|kallikrein 1##X13561|KLK1|3816|kallikrein 1##AY429508|KLK1|3816|kallikrein 1##NM_002257|KLK1|3816|kallikrein 1##AY373373|KLK15|55554|kallikrein-related peptidase 15##AY373374|KLK15|55554|kallikrein-related peptidase 15##HQ258133|KLK15|55554|kallikrein-related peptidase 15##BC126137|KLK15|55554|kallikrein-related peptidase 15##BC144045|KLK15|55554|kallikrein-related peptidase 15##BC144046|KLK15|55554|kallikrein-related peptidase 15##BC144047|KLK15|55554|kallikrein-related peptidase 15##AF303046|KLK15|55554|kallikrein-related peptidase 15##BC069480|KLK15|55554|kallikrein-related peptidase 15##BC069507|KLK15|55554|kallikrein-related peptidase 15##BC069518|KLK15|55554|kallikrein-related peptidase 15##NM_017509|KLK15|55554|kallikrein-related peptidase 15##NM_138563|KLK15|55554|kallikrein-related peptidase 15##NM_138564|KLK15|55554|kallikrein-related peptidase 15##AF335477|KLK3|354|kallikrein-related peptidase 3##AF335478|KLK3|354|kallikrein-related peptidase 3##AX772834|KLK3|354|kallikrein-related peptidase 3##BC005307|KLK3|354|kallikrein-related peptidase 3##NM_001030047|KLK3|354|kallikrein-related peptidase 3##NM_001030048|KLK3|354|kallikrein-related peptidase 3##NM_001030050|KLK3|354|kallikrein-related peptidase 3##NM_001648|KLK3|354|kallikrein-related peptidase 3##S75755|KLK3|354|kallikrein-related peptidase 3##U17040|KLK3|354|kallikrein-related peptidase 3##X05332|KLK3|354|kallikrein-related peptidase 3##BC056665|KLK3|354|kallikrein-related peptidase 3##AJ310937|KLK3|354|kallikrein-related peptidase 3##AJ459784|KLK3|354|kallikrein-related peptidase 3##AJ310938|KLK3|354|kallikrein-related peptidase 3##AK312933|KLK3|354|kallikrein-related peptidase 3##AJ459782|KLK3|354|kallikrein-related peptidase 3##AJ459783|KLK3|354|kallikrein-related peptidase 3##AJ512346|KLK3|354|kallikrein-related peptidase 3##M26663|KLK3|354|kallikrein-related peptidase 3##DQ890670|KLK3|354|kallikrein-related peptidase 3##DQ893851|KLK3|354|kallikrein-related peptidase 3##BT019862|KLK3|354|kallikrein-related peptidase 3##M21895|KLK3|354|kallikrein-related peptidase 3##M21896|KLK3|354|kallikrein-related peptidase 3##M21897|KLK3|354|kallikrein-related peptidase 3	0.0	
chr7	1852098	1852205	reg1027032.p1	3.919	+	NM_001128636	-103354	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-242330	+	AB067495 TSC_hg19_v1_chr7_+_1609735	-242418	+	TSC_hg19_v1_chr7_-_1980177 BC018870	128012	-	AK310481 TSC_hg19_v1_chr7_-_2272542	420384	-	TSC_hg19_v1_chr7_-_2272559 AF083811	420409	-	NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AB067495|KIAA1908|114796|uncharacterized LOC114796##BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AF083811|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.906024	CTCF.p2:23:0.906
chr8	77589729	77589812	reg1026834.p1	3.919	+	BX571750 NM_004133 EU832451 HQ692842	-1137556	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	-1269582	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-1692861	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	3740	+	AB083343 TSC_hg19_v1_chr8_+_77593533	3758	+	AK131399 TSC_hg19_v1_chr8_+_77765961	176119	+	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4##AB083343|ZFHX4|79776|zinc finger homeobox 4##AK131399|ZFHX4|79776|zinc finger homeobox 4	0.0	
chr9	117159984	117160138	reg1030581.p1	3.919	+	AY703040 BC055285 NM_030767	-3377	-	AY703041 AY703042 AK131082 AK160382 TSC_hg19_v1_chr9_-_117150263 AB075848	-9771	-	BC042202 TSC_hg19_v1_chr9_-_117111294	-48772	-	AY703039 AK126136 TSC_hg19_v1_chr9_-_117160753	690	-	AL110228 NM_001083885	105412	-	BC142684 TSC_hg19_v1_chr9_-_117267731 AK056190 BC142614 NM_001173425 NM_015404	107669	-	AY703040|AKNA|80709|AT-hook transcription factor##BC055285|AKNA|80709|AT-hook transcription factor##NM_030767|AKNA|80709|AT-hook transcription factor##AY703041|AKNA|80709|AT-hook transcription factor##AY703042|AKNA|80709|AT-hook transcription factor##AK131082|AKNA|80709|AT-hook transcription factor##AK160382|AKNA|80709|AT-hook transcription factor##AB075848|AKNA|80709|AT-hook transcription factor##BC042202|AKNA|80709|AT-hook transcription factor##AY703039|AKNA|80709|AT-hook transcription factor##AK126136|AKNA|80709|AT-hook transcription factor##AL110228|DFNB31|25861|deafness, autosomal recessive 31##NM_001083885|DFNB31|25861|deafness, autosomal recessive 31##BC142684|DFNB31|25861|deafness, autosomal recessive 31##AK056190|DFNB31|25861|deafness, autosomal recessive 31##BC142614|DFNB31|25861|deafness, autosomal recessive 31##NM_001173425|DFNB31|25861|deafness, autosomal recessive 31##NM_015404|DFNB31|25861|deafness, autosomal recessive 31	0.0	
chr11	109964796	109964893	reg1037626.p1	3.918	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	-714	+	AK095101 TSC_hg19_v1_chr11_+_109963524	-1316	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-671945	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	202469	-	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	335872	+	AY496266 TSC_hg19_v1_chr11_-_110582834	617959	-	NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20	0.0	
chr11	111101056	111101189	reg1005524.p1	3.918	+	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	-517837	-	TSC_hg19_v1_chr11_-_110582887 AB037812	-518197	-	AY496266 TSC_hg19_v1_chr11_-_110582834	-518319	-	BC039669 NM_198498	25584	+	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	68911	+	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	148830	-	AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20##AB037812|ARHGAP20|57569|Rho GTPase activating protein 20##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20##BC039669|C11orf53|341032|chromosome 11 open reading frame 53##NM_198498|C11orf53|341032|chromosome 11 open reading frame 53##AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1	0.0	
chr11	20693559	20693719	reg1020742.p1	3.918	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	-2447	+	NM_004211 AF085412	-72692	+	BC047226 TSC_hg19_v1_chr11_+_20409261 AK301449 AK298185 AK300591 BC037544 AB590779 EU831425 EU831518	-284379	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	1521008	+	AB032435 NM_020346	1666027	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	1953722	-	AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##BC047226|PRMT3|10196|protein arginine methyltransferase 3##AK301449|PRMT3|10196|protein arginine methyltransferase 3##AK298185|PRMT3|10196|protein arginine methyltransferase 3##AK300591|PRMT3|10196|protein arginine methyltransferase 3##BC037544|PRMT3|10196|protein arginine methyltransferase 3##EU831425|PRMT3|10196|protein arginine methyltransferase 3##EU831518|PRMT3|10196|protein arginine methyltransferase 3##AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F	0.024169	
chr13	97683445	97683529	reg1035612.p2	3.918	+	AK122639 NM_080818 AK313684	-36875	-	AF539426 NM_153456	-940395	+	CU688350 TSC_hg19_v1_chr13_-_96705666 BC125233 BC125234 AF227906 BC017759 BC067807 BC111021 AK001735 BC032302 NM_020121	-977837	-	TSC_hg19_v1_chr13_+_97794087 CR749802	110595	+	TSC_hg19_v1_chr13_+_97874586 AK074610 NM_144778 NM_207304 AK291727 AF061261 AF491866 BC032426 BC104038 BC104039 BC104040 AK315844	191108	+	TSC_hg19_v1_chr13_+_97874708 BC020418	191227	+	AK122639|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##NM_080818|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AK313684|OXGR1|27199|oxoglutarate (alpha-ketoglutarate) receptor 1##AF539426|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##NM_153456|HS6ST3|266722|heparan sulfate 6-O-sulfotransferase 3##BC125233|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC125234|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AF227906|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC017759|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC067807|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC111021|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##AK001735|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##BC032302|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##NM_020121|UGGT2|55757|UDP-glucose glycoprotein glucosyltransferase 2##CR749802|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_144778|MBNL2|10150|muscleblind-like 2 (Drosophila)##NM_207304|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK291727|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF061261|MBNL2|10150|muscleblind-like 2 (Drosophila)##AF491866|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC032426|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104038|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104039|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC104040|MBNL2|10150|muscleblind-like 2 (Drosophila)##AK315844|MBNL2|10150|muscleblind-like 2 (Drosophila)##BC020418|MBNL2|10150|muscleblind-like 2 (Drosophila)	0.784198	CTCF.p2:16:0.784
chr14	86928704	86928800	reg1033409.p1	3.918	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-929167	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-932211	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-932279	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	1530711	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	1530807	-	NM_001201402	1531256	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	0.992294	CTCF.p2:-15:0.992
chr16	85261075	85261255	reg1031745.p2	3.918	+	BC093665 BC111944 AK126284 NM_198491	-115111	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-199795	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-216036	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	383856	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	385788	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	461377	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.019591	
chr17	33355958	33356138	reg1029732.p2	3.918	+	TSC_hg19_v1_chr17_+_33307530 NM_002311 NM_013975 BC068005 AK300363 AK308407 U40671 X84740 BC009026	-48460	+	TSC_hg19_v1_chr17_+_33288558 AK315671 NM_052857 AK055707 AB590460 BC002913 BC011584 DQ892326 DQ895528	-67459	+	TSC_hg19_v1_chr17_-_33288480 AK302344 BC027591 NM_001193529 NM_001193530 NM_006584	-67546	-	TSC_hg19_v1_chr17_-_33390690 CR933651 NM_001017368	34669	-	TSC_hg19_v1_chr17_-_33416298 AK093112 AX747930 BC028424	60263	-	AB464124 DQ892318 DQ895520 BC002723 AB013341 AB016223 AB016224 AB016225 Y15572 AF034956 BC014422 TSC_hg19_v1_chr17_-_33446836 AK296241 BX647297 AK301249	90697	-	NM_002311|LIG3|3980|ligase III, DNA, ATP-dependent##NM_013975|LIG3|3980|ligase III, DNA, ATP-dependent##BC068005|LIG3|3980|ligase III, DNA, ATP-dependent##AK300363|LIG3|3980|ligase III, DNA, ATP-dependent##AK308407|LIG3|3980|ligase III, DNA, ATP-dependent##U40671|LIG3|3980|ligase III, DNA, ATP-dependent##X84740|LIG3|3980|ligase III, DNA, ATP-dependent##BC009026|LIG3|3980|ligase III, DNA, ATP-dependent##AK315671|ZNF830|91603|zinc finger protein 830##NM_052857|ZNF830|91603|zinc finger protein 830##AK055707|ZNF830|91603|zinc finger protein 830##BC002913|ZNF830|91603|zinc finger protein 830##BC011584|ZNF830|91603|zinc finger protein 830##DQ892326|ZNF830|91603|zinc finger protein 830##DQ895528|ZNF830|91603|zinc finger protein 830##AK302344|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC027591|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193529|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193530|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_006584|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1##NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1##AK093112|RFFL|117584|ring finger and FYVE-like domain containing 1##BC028424|RFFL|117584|ring finger and FYVE-like domain containing 1##DQ892318|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##DQ895520|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC002723|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB013341|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016223|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016224|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016225|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##Y15572|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AF034956|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC014422|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK296241|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BX647297|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK301249|RAD51D|5892|RAD51 homolog D (S. cerevisiae)	0.0	
chr20	47050443	47050548	reg1035764.p1	3.918	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-635177	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-635743	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-919811	+	AB037836 TSC_hg19_v1_chr20_-_47444291	393791	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	393944	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	487823	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.749228	CTCF.p2:-16:0.673
chr2	132439972	132440085	reg1031651.p1	3.918	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-154522	+	AK304811 TSC_hg19_v1_chr2_+_132250648 AK293811 AK300337 AK303293 AK308371 BC093080	-189443	+	TSC_hg19_v1_chr2_-_132250072 NM_001085365	-189967	-	AF038169 NM_013310	40035	+	BC043584 NM_214461	119205	-	AK122643 NM_001508	734118	+	BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK304811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK293811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK300337|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK303293|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK308371|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC093080|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39	0.0	
chr2	96804727	96804907	reg1001203.p2	3.918	+	BC107126 AJ537600 BC107127 NM_001002036	-644	-	NM_000682 AB527942 BC133021 BC136537	-22882	-	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	-104123	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	6137	-	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	6342	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	69238	-	BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.0	
chr7	137580008	137580188	reg1033643.p1	3.918	+	TSC_hg19_v1_chr7_+_137531690 BC047556	-48366	+	TSC_hg19_v1_chr7_-_137531587 NM_004717	-48502	-	BC005916 TSC_hg19_v1_chr7_-_137028543 NM_002825 M57399	-551543	-	TSC_hg19_v1_chr7_-_137620668 BC015585	40564	-	NM_001243523	57995	+	AK293048 BC110813 TSC_hg19_v1_chr7_-_137686800 BC063666 AJ549092 AJ549387	106696	-	NM_004717|DGKI|9162|diacylglycerol kinase, iota##BC005916|PTN|5764|pleiotrophin##NM_002825|PTN|5764|pleiotrophin##M57399|PTN|5764|pleiotrophin##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_001243523|LOC100130880|100130880|uncharacterized LOC100130880##AK293048|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC110813|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC063666|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549092|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549387|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.0	
chr7	6882692	6882800	reg1036133.p1	3.918	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-16848	-	AK296026 CU679629 AK000993 TSC_hg19_v1_chr7_-_6865849	-16908	-	AK314983 BC034495 NM_001099697 NM_173565	-89007	+	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	339501	+	BC136892 BC144431 AJ890451 NM_001037763	692708	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	723842	+	BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK296026|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK000993|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)	0.782505	CTCF.p2:43:0.740
chr8	142255388	142255550	reg1031417.p2	3.918	+	AK128212 NM_001080431	-16797	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-116732	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-244213	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	8721	-	NM_005293	121895	-	TSC_hg19_v1_chr8_+_142402120 AK311257	146665	+	AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.0	
chr9	125702349	125702415	reg1037825.p2	3.918	+	BC018748 NM_020924 TSC_hg19_v1_chr9_-_125693788	-8596	-	X82018 AK292401 BC037282 NM_006626	-26793	-	BC044642 AL833177 TSC_hg19_v1_chr9_-_125667584 NM_001100588 NM_018835	-34838	-	AK131449 TSC_hg19_v1_chr9_+_125703299 BC020609 NM_012197 AK022408 BC054492 AF161357 AJ011679	846	+	AK294531 AK299686 TSC_hg19_v1_chr9_+_125795928 AK313539	93485	+	AB384939 BC066885 BC066886 BC067532 BC067533 BC067534 CU688178 NM_005294	94463	+	BC018748|ZBTB26|57684|zinc finger and BTB domain containing 26##NM_020924|ZBTB26|57684|zinc finger and BTB domain containing 26##X82018|ZBTB6|10773|zinc finger and BTB domain containing 6##AK292401|ZBTB6|10773|zinc finger and BTB domain containing 6##BC037282|ZBTB6|10773|zinc finger and BTB domain containing 6##NM_006626|ZBTB6|10773|zinc finger and BTB domain containing 6##BC044642|RC3H2|54542|ring finger and CCCH-type domains 2##AL833177|RC3H2|54542|ring finger and CCCH-type domains 2##NM_001100588|RC3H2|54542|ring finger and CCCH-type domains 2##NM_018835|RC3H2|54542|ring finger and CCCH-type domains 2##AK131449|RABGAP1|23637|RAB GTPase activating protein 1##BC020609|RABGAP1|23637|RAB GTPase activating protein 1##NM_012197|RABGAP1|23637|RAB GTPase activating protein 1##AK022408|RABGAP1|23637|RAB GTPase activating protein 1##BC054492|RABGAP1|23637|RAB GTPase activating protein 1##AF161357|RABGAP1|23637|RAB GTPase activating protein 1##AJ011679|RABGAP1|23637|RAB GTPase activating protein 1##AK294531|RABGAP1|23637|RAB GTPase activating protein 1##AK299686|GPR21|2844|G protein-coupled receptor 21##AK313539|GPR21|2844|G protein-coupled receptor 21##BC066885|GPR21|2844|G protein-coupled receptor 21##BC066886|GPR21|2844|G protein-coupled receptor 21##BC067532|GPR21|2844|G protein-coupled receptor 21##BC067533|GPR21|2844|G protein-coupled receptor 21##BC067534|GPR21|2844|G protein-coupled receptor 21##NM_005294|GPR21|2844|G protein-coupled receptor 21	0.0	
chr1	10233722	10233894	reg1032982.p1	3.917	+	AB014584 TSC_hg19_v1_chr1_+_10093218	-140595	+	TSC_hg19_v1_chr1_+_10093015 AB028839 NM_001105562 NM_006048	-140793	+	BC063013 NM_052960 BC033883 AF399927 AK312027 AY145438 CU687628	-176524	+	TSC_hg19_v1_chr1_+_10270680 AK308121 NM_015074 NM_183416 AF257176 AY139835	36963	+	NM_002631 TSC_hg19_v1_chr1_+_10459125 AK300952 AK290404 AK296889 AK303898 AK304423 BC000368 U30255 AB463169 AK298830	225321	+	AF521016 NM_198544 NM_199006 NM_199294	256350	+	AB014584|UBE4B|10277|ubiquitination factor E4B##AB028839|UBE4B|10277|ubiquitination factor E4B##NM_001105562|UBE4B|10277|ubiquitination factor E4B##NM_006048|UBE4B|10277|ubiquitination factor E4B##BC063013|RBP7|116362|retinol binding protein 7, cellular##NM_052960|RBP7|116362|retinol binding protein 7, cellular##BC033883|RBP7|116362|retinol binding protein 7, cellular##AF399927|RBP7|116362|retinol binding protein 7, cellular##AK312027|RBP7|116362|retinol binding protein 7, cellular##AY145438|RBP7|116362|retinol binding protein 7, cellular##AK308121|KIF1B|23095|kinesin family member 1B##NM_015074|KIF1B|23095|kinesin family member 1B##NM_183416|KIF1B|23095|kinesin family member 1B##AF257176|KIF1B|23095|kinesin family member 1B##AY139835|KIF1B|23095|kinesin family member 1B##NM_002631|PGD|5226|phosphogluconate dehydrogenase##AK300952|PGD|5226|phosphogluconate dehydrogenase##AK290404|PGD|5226|phosphogluconate dehydrogenase##AK296889|PGD|5226|phosphogluconate dehydrogenase##AK303898|PGD|5226|phosphogluconate dehydrogenase##AK304423|PGD|5226|phosphogluconate dehydrogenase##BC000368|PGD|5226|phosphogluconate dehydrogenase##U30255|PGD|5226|phosphogluconate dehydrogenase##AK298830|PGD|5226|phosphogluconate dehydrogenase##AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1	0.138459	
chr1	14136380	14136497	reg1034380.p2	3.917	+	AK293725 AK311678 TSC_hg19_v1_chr1_+_14075931 BC051275 U23736	-60497	+	AK308135 TSC_hg19_v1_chr1_+_14075930 AK300441 BC140012	-60515	+	TSC_hg19_v1_chr1_+_14075909 NM_001007257 BC032768 D45132 AB208877 AK307377 BX647310	-60553	+	TSC_hg19_v1_chr1_+_14925186 AB028949 AY505119 NM_015209 NM_201628	788756	+	TSC_hg19_v1_chr1_+_15250637 AY505120 NM_001018000 BC035501	1114281	+	AY505121 NM_001018001	1119857	+	AK293725|PRDM2|7799|PR domain containing 2, with ZNF domain##AK311678|PRDM2|7799|PR domain containing 2, with ZNF domain##U23736|PRDM2|7799|PR domain containing 2, with ZNF domain##AK308135|PRDM2|7799|PR domain containing 2, with ZNF domain##AK300441|PRDM2|7799|PR domain containing 2, with ZNF domain##BC140012|PRDM2|7799|PR domain containing 2, with ZNF domain##NM_001007257|PRDM2|7799|PR domain containing 2, with ZNF domain##BC032768|PRDM2|7799|PR domain containing 2, with ZNF domain##D45132|PRDM2|7799|PR domain containing 2, with ZNF domain##AB208877|PRDM2|7799|PR domain containing 2, with ZNF domain##AK307377|PRDM2|7799|PR domain containing 2, with ZNF domain##BX647310|PRDM2|7799|PR domain containing 2, with ZNF domain##AB028949|KAZN|23254|kazrin, periplakin interacting protein##AY505119|KAZN|23254|kazrin, periplakin interacting protein##NM_015209|KAZN|23254|kazrin, periplakin interacting protein##NM_201628|KAZN|23254|kazrin, periplakin interacting protein##AY505120|KAZN|23254|kazrin, periplakin interacting protein##NM_001018000|KAZN|23254|kazrin, periplakin interacting protein##BC035501|KAZN|23254|kazrin, periplakin interacting protein##AY505121|KAZN|23254|kazrin, periplakin interacting protein##NM_001018001|KAZN|23254|kazrin, periplakin interacting protein	0.947594	CTCF.p2:10:0.948
chr12	119145590	119145705	reg1035438.p2	3.917	+	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	-331245	+	TSC_hg19_v1_chr12_-_118810713 NM_016281	-334917	-	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	-335019	-	AK291361 NM_194286 TSC_hg19_v1_chr12_+_119419299 AB058756 BC152471 BC167162 BC167163	273700	+	AF191017 NM_014365 BC002673 TSC_hg19_v1_chr12_+_119616735 AK312501 AF217987 AF133207 AL136936	471032	+	BC040553 NM_178499	626869	+	BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_016281|TAOK3|51347|TAO kinase 3##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##AK291361|SRRM4|84530|serine/arginine repetitive matrix 4##NM_194286|SRRM4|84530|serine/arginine repetitive matrix 4##AB058756|SRRM4|84530|serine/arginine repetitive matrix 4##BC152471|SRRM4|84530|serine/arginine repetitive matrix 4##BC167162|SRRM4|84530|serine/arginine repetitive matrix 4##BC167163|SRRM4|84530|serine/arginine repetitive matrix 4##AF191017|HSPB8|26353|heat shock 22kDa protein 8##NM_014365|HSPB8|26353|heat shock 22kDa protein 8##BC002673|HSPB8|26353|heat shock 22kDa protein 8##AK312501|HSPB8|26353|heat shock 22kDa protein 8##AF217987|HSPB8|26353|heat shock 22kDa protein 8##AF133207|HSPB8|26353|heat shock 22kDa protein 8##AL136936|HSPB8|26353|heat shock 22kDa protein 8##BC040553|CCDC60|160777|coiled-coil domain containing 60##NM_178499|CCDC60|160777|coiled-coil domain containing 60	0.0	
chr12	29462398	29462532	reg1041265.p2	3.917	+	TSC_hg19_v1_chr12_+_29376598 BC022267 NM_018099 AK027756 AK129857 AK001927	-85794	+	AL136843 TSC_hg19_v1_chr12_+_29302210 AK001324 AK314670 BC018460	-160273	+	AY289196 NM_018318 AB587421	-1052325	+	TSC_hg19_v1_chr12_-_29534081 BC064522	71610	-	AK222799 TSC_hg19_v1_chr12_-_29534084 AL834128	71618	-	TSC_hg19_v1_chr12_-_29534109 AF183410 AF216751 AF302767 BC000887 BC107794 NM_016570	71650	-	BC022267|FAR2|55711|fatty acyl CoA reductase 2##NM_018099|FAR2|55711|fatty acyl CoA reductase 2##AK027756|FAR2|55711|fatty acyl CoA reductase 2##AK129857|FAR2|55711|fatty acyl CoA reductase 2##AK001927|FAR2|55711|fatty acyl CoA reductase 2##AL136843|FAR2|55711|fatty acyl CoA reductase 2##AK001324|FAR2|55711|fatty acyl CoA reductase 2##AK314670|FAR2|55711|fatty acyl CoA reductase 2##AY289196|CCDC91|55297|coiled-coil domain containing 91##NM_018318|CCDC91|55297|coiled-coil domain containing 91##BC064522|ERGIC2|51290|ERGIC and golgi 2##AK222799|ERGIC2|51290|ERGIC and golgi 2##AL834128|ERGIC2|51290|ERGIC and golgi 2##AF183410|ERGIC2|51290|ERGIC and golgi 2##AF216751|ERGIC2|51290|ERGIC and golgi 2##AF302767|ERGIC2|51290|ERGIC and golgi 2##BC000887|ERGIC2|51290|ERGIC and golgi 2##BC107794|ERGIC2|51290|ERGIC and golgi 2##NM_016570|ERGIC2|51290|ERGIC and golgi 2	0.889202	CTCF.p2:-17:0.889
chr17	21219497	21219678	reg1004247.p1	3.917	+	NM_002756	-28240	+	BC032478 TSC_hg19_v1_chr17_+_21188087 AK093838 AK223490 D87116 CU689390 DQ894188 AB451226 AB451349 CR536514 CR541793 GQ225578	-31455	+	TSC_hg19_v1_chr17_+_21188022 AK315505	-31563	+	TSC_hg19_v1_chr17_+_21279667 BC027982 NM_021012	60095	+	FJ434338 NM_001194958	88860	+	TSC_hg19_v1_chr17_-_21454933 AK056436 BC132738 BC136630 BC019938 BC010612 BC052777 BC053952 NM_001113434	235336	-	NM_002756|MAP2K3|5606|mitogen-activated protein kinase kinase 3##BC032478|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK093838|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK223490|MAP2K3|5606|mitogen-activated protein kinase kinase 3##D87116|MAP2K3|5606|mitogen-activated protein kinase kinase 3##DQ894188|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AB451226|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AB451349|MAP2K3|5606|mitogen-activated protein kinase kinase 3##CR536514|MAP2K3|5606|mitogen-activated protein kinase kinase 3##CR541793|MAP2K3|5606|mitogen-activated protein kinase kinase 3##GQ225578|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK315505|MAP2K3|5606|mitogen-activated protein kinase kinase 3##BC027982|KCNJ12|3768|potassium inwardly-rectifying channel, subfamily J, member 12##NM_021012|KCNJ12|3768|potassium inwardly-rectifying channel, subfamily J, member 12##FJ434338|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##NM_001194958|KCNJ18|100134444|potassium inwardly-rectifying channel, subfamily J, member 18##AK056436|C17orf51|339263|chromosome 17 open reading frame 51##BC132738|C17orf51|339263|chromosome 17 open reading frame 51##BC136630|C17orf51|339263|chromosome 17 open reading frame 51##BC019938|C17orf51|339263|chromosome 17 open reading frame 51##BC010612|C17orf51|339263|chromosome 17 open reading frame 51##BC052777|C17orf51|339263|chromosome 17 open reading frame 51##BC053952|C17orf51|339263|chromosome 17 open reading frame 51##NM_001113434|C17orf51|339263|chromosome 17 open reading frame 51	0.0	
chr2	202845221	202845380	reg1040150.p1	3.917	+	AB053308 AX772791 NM_139158 AK131512 BX647394 BC038807 EU831752 EU831828	-174008	+	NM_001135745 NM_020919	-199406	-	TSC_hg19_v1_chr2_-_202645657 BC071576 AB053305 AB053306 AF391100 AK023024 BC029174 AK291029	-199635	-	AB017365 NM_003507 AB010881 BC015915 CU677505	54039	+	X99586 TSC_hg19_v1_chr2_-_203103288 U38784 U67122 BC053528 AK311840 BC005899 AB062294 BC066306 BC006462 U83117 U61397 NM_001005781 NM_001005782 NM_003352	257968	-	TSC_hg19_v1_chr2_+_203130458 AK300844 AK307396 AL117554 BC001707	285156	+	AB053308|CDK15|65061|cyclin-dependent kinase 15##AX772791|CDK15|65061|cyclin-dependent kinase 15##NM_139158|CDK15|65061|cyclin-dependent kinase 15##AK131512|CDK15|65061|cyclin-dependent kinase 15##BX647394|CDK15|65061|cyclin-dependent kinase 15##BC038807|CDK15|65061|cyclin-dependent kinase 15##EU831752|CDK15|65061|cyclin-dependent kinase 15##EU831828|CDK15|65061|cyclin-dependent kinase 15##NM_001135745|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##NM_020919|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##BC071576|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053305|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053306|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AF391100|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AK023024|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##BC029174|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AK291029|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB017365|FZD7|8324|frizzled family receptor 7##NM_003507|FZD7|8324|frizzled family receptor 7##AB010881|FZD7|8324|frizzled family receptor 7##BC015915|FZD7|8324|frizzled family receptor 7##X99586|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U38784|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U67122|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC053528|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK311840|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC005899|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AB062294|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC066306|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC006462|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U83117|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U61397|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005781|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005782|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_003352|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK300844|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK307396|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AL117554|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC001707|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)	0.0	
chr5	139027856	139027937	reg1033495.p1	3.917	+	TSC_hg19_v1_chr5_+_139027874 AK024338	-22	+	TSC_hg19_v1_chr5_+_138941350 U39317 AB590980	-86548	+	TSC_hg19_v1_chr5_+_138940966 AK001428 BC019052 AK001311 AY651263	-86971	+	TSC_hg19_v1_chr5_+_139027942 BC006428	34	+	BC024040 BC041013 TSC_hg19_v1_chr5_+_139027968 BC050046 BC017439	88	+	TSC_hg19_v1_chr5_+_139028290 AB097005 AB097032 NM_016463	271	+	AK024338|CXXC5|51523|CXXC finger protein 5##U39317|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001428|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC019052|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001311|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AY651263|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC006428|CXXC5|51523|CXXC finger protein 5##BC024040|CXXC5|51523|CXXC finger protein 5##BC041013|CXXC5|51523|CXXC finger protein 5##BC050046|CXXC5|51523|CXXC finger protein 5##BC017439|CXXC5|51523|CXXC finger protein 5##AB097005|CXXC5|51523|CXXC finger protein 5##AB097032|CXXC5|51523|CXXC finger protein 5##NM_016463|CXXC5|51523|CXXC finger protein 5	0.0	
chr5	17378761	17378828	reg1042010.p1	3.917	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-160954	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-161182	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-442409	-	AK295087 BC031051 NM_001167667 NM_004934	2609528	-	TSC_hg19_v1_chr5_+_21459621 AK290693	4080815	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	4080854	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.0	
chr6	149069407	149069486	reg1008742.p4	3.917	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-1237	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-405255	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-405456	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	569657	+	AK315038 NM_015093 AK307650	569995	+	AY340238 NM_001002255 BC130305 HQ258040	652062	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr7	86773721	86773859	reg1033144.p2	3.917	+	TSC_hg19_v1_chr7_-_86688965 NM_001142749	-84812	-	AK296250 NM_152748	-178544	-	X77748 TSC_hg19_v1_chr7_+_86274130 DQ315361 DQ315362 DQ315363	-499674	+	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	7923	+	NM_021145 TSC_hg19_v1_chr7_+_86781946 BC070064	8147	+	BT006973 TSC_hg19_v1_chr7_-_86849049 BC002837 NM_024315 AK313794	75151	-	NM_001142749|KIAA1324L|222223|KIAA1324-like##AK296250|KIAA1324L|222223|KIAA1324-like##NM_152748|KIAA1324L|222223|KIAA1324-like##X77748|GRM3|2913|glutamate receptor, metabotropic 3##DQ315361|GRM3|2913|glutamate receptor, metabotropic 3##DQ315362|GRM3|2913|glutamate receptor, metabotropic 3##DQ315363|GRM3|2913|glutamate receptor, metabotropic 3##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_021145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BC070064|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BT006973|C7orf23|79161|chromosome 7 open reading frame 23##BC002837|C7orf23|79161|chromosome 7 open reading frame 23##NM_024315|C7orf23|79161|chromosome 7 open reading frame 23##AK313794|C7orf23|79161|chromosome 7 open reading frame 23	0.0	
chr9	93657588	93657753	reg1029209.p2	3.917	+	NM_001174167 X73568	-67937	+	TSC_hg19_v1_chr9_+_93564206 NM_001174168 BC011399	-93455	+	TSC_hg19_v1_chr9_+_93564100 AK290927	-93555	+	TSC_hg19_v1_chr9_-_94124185 AB528075 AM393420 CU676666 DQ892036 DQ895227 X79888 AK302453	466500	-	BC020722 TSC_hg19_v1_chr9_-_94124201 NM_001698	466529	-	AK313970 S79880 U26173 X64318 TSC_hg19_v1_chr9_-_94186112	528374	-	NM_001174167|SYK|6850|spleen tyrosine kinase##X73568|SYK|6850|spleen tyrosine kinase##NM_001174168|SYK|6850|spleen tyrosine kinase##BC011399|SYK|6850|spleen tyrosine kinase##AK290927|SYK|6850|spleen tyrosine kinase##AM393420|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ892036|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##DQ895227|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##X79888|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK302453|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##BC020722|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##NM_001698|AUH|549|AU RNA binding protein/enoyl-CoA hydratase##AK313970|NFIL3|4783|nuclear factor, interleukin 3 regulated##S79880|NFIL3|4783|nuclear factor, interleukin 3 regulated##U26173|NFIL3|4783|nuclear factor, interleukin 3 regulated##X64318|NFIL3|4783|nuclear factor, interleukin 3 regulated	0.953703	CTCF.p2:38:0.954
chrX	139015342	139015431	reg1028808.p1	3.917	+	BC132728 BC132730 AJ580093 AJ580094 NM_001010986 NM_173694	-100971	-	AK302957 AK316416 NM_001099855 NM_001171876	-225032	-	X12556 AK313900 AK296488 NM_001171877 NM_001171878 NM_001171879 NM_005369	-290461	-	BC137148 BC137149 NM_001013403	32290	-	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	571866	-	TSC_hg19_v1_chrX_+_139791923 AK054978	776541	+	BC132728|ATP11C|286410|ATPase, class VI, type 11C##BC132730|ATP11C|286410|ATPase, class VI, type 11C##AJ580093|ATP11C|286410|ATPase, class VI, type 11C##AJ580094|ATP11C|286410|ATPase, class VI, type 11C##NM_001010986|ATP11C|286410|ATPase, class VI, type 11C##NM_173694|ATP11C|286410|ATPase, class VI, type 11C##AK302957|MCF2|4168|MCF.2 cell line derived transforming sequence##AK316416|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001099855|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171876|MCF2|4168|MCF.2 cell line derived transforming sequence##X12556|MCF2|4168|MCF.2 cell line derived transforming sequence##AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence##AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence##BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##AK054978|RP1-177G6.2|286411|uncharacterized LOC286411	0.0	
chr11	72284650	72284817	reg1007645.p2	3.916	+	TSC_hg19_v1_chr11_-_72145602 AL136909 AK302158	-139083	-	TSC_hg19_v1_chr11_-_72145569 AK302006 AK023214	-139157	-	TSC_hg19_v1_chr11_-_72145558 AK302069 CU675391 EU176435 EU176772 BC006404 NM_030813	-139278	-	TSC_hg19_v1_chr11_-_72353458 AY495089 AK131525 AK092278 AX747449 NM_001143839 NM_001243784	68746	-	AY495087 NM_001146209	95374	-	U67733 TSC_hg19_v1_chr11_-_72385467 AK295676 AK312434 AY495088 BC040974 NM_002599	100720	-	AL136909|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302158|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302006|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK023214|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK302069|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176435|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##EU176772|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##BC006404|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##NM_030813|CLPB|81570|ClpB caseinolytic peptidase B homolog (E. coli)##AK131525|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK092278|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001143839|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001243784|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495087|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_001146209|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##U67733|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK295676|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AK312434|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##AY495088|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##BC040974|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated##NM_002599|PDE2A|5138|phosphodiesterase 2A, cGMP-stimulated	0.0	
chr12	102330164	102330345	reg1031714.p2	3.916	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	-58796	+	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	-59136	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	-105668	-	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	125496	-	TSC_hg19_v1_chr12_-_102455791 BC010889	125523	-	TSC_hg19_v1_chr12_-_102455912 AK314970 AK223339 AF151874 AF155655 NM_016053	125607	-	AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##CR457171|CCDC53|51019|coiled-coil domain containing 53##BC010889|CCDC53|51019|coiled-coil domain containing 53##AK314970|CCDC53|51019|coiled-coil domain containing 53##AK223339|CCDC53|51019|coiled-coil domain containing 53##AF151874|CCDC53|51019|coiled-coil domain containing 53##AF155655|CCDC53|51019|coiled-coil domain containing 53##NM_016053|CCDC53|51019|coiled-coil domain containing 53	0.0	
chr15	41799265	41799391	reg1040018.p1	3.916	+	NM_002220 TSC_hg19_v1_chr15_+_41786071 BC026331 X54938 AB463780	-13238	+	TSC_hg19_v1_chr15_+_41709329 NM_015138 AK292302 D87440 BC015052 AB383821	-89968	+	AF151823 BC000780 NM_016013 AK310033 AK310983 AK309889 TSC_hg19_v1_chr15_-_41694659	-104666	-	BC143903 D16105 AK314006 BC045607 X60702 AK296892 NM_001135685 NM_002344 NM_206961	6710	-	AB037824 TSC_hg19_v1_chr15_-_41836456 AK290224 BC000246	37121	-	TSC_hg19_v1_chr15_-_41836465 AK022794 NM_015540 AK308884	37136	-	NM_002220|ITPKA|3706|inositol-trisphosphate 3-kinase A##BC026331|ITPKA|3706|inositol-trisphosphate 3-kinase A##X54938|ITPKA|3706|inositol-trisphosphate 3-kinase A##NM_015138|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK292302|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##D87440|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC015052|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF151823|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##BC000780|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##NM_016013|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK310033|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK310983|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK309889|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##BC143903|LTK|4058|leukocyte receptor tyrosine kinase##D16105|LTK|4058|leukocyte receptor tyrosine kinase##AK314006|LTK|4058|leukocyte receptor tyrosine kinase##BC045607|LTK|4058|leukocyte receptor tyrosine kinase##X60702|LTK|4058|leukocyte receptor tyrosine kinase##AK296892|LTK|4058|leukocyte receptor tyrosine kinase##NM_001135685|LTK|4058|leukocyte receptor tyrosine kinase##NM_002344|LTK|4058|leukocyte receptor tyrosine kinase##NM_206961|LTK|4058|leukocyte receptor tyrosine kinase##AB037824|RPAP1|26015|RNA polymerase II associated protein 1##AK290224|RPAP1|26015|RNA polymerase II associated protein 1##BC000246|RPAP1|26015|RNA polymerase II associated protein 1##AK022794|RPAP1|26015|RNA polymerase II associated protein 1##NM_015540|RPAP1|26015|RNA polymerase II associated protein 1##AK308884|RPAP1|26015|RNA polymerase II associated protein 1	1.029814	CTCF.p2:5:0.988
chr16	33239912	33240022	reg1036793.p2	3.916	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-34369	+	AL133588 NM_016212	-34988	+	AK300387 TSC_hg19_v1_chr16_+_32752635	-487331	+	AL133588 NM_016212	21547	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	22166	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	13415305	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1	0.0	
chr17	75491534	75491614	reg1000012.p3	3.916	+	AK056495 NM_001113495	-20250	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-44185	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-44792	+	TSC_hg19_v1_chr17_+_75543021 AK096234	51446	+	BC039479 NM_001142640 NM_018996	508708	+	TSC_hg19_v1_chr17_-_76124768 AK074065	633198	-	AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK074065|TMC6|11322|transmembrane channel-like 6	0.0	
chr19	2494988	2495082	reg1036046.p2	3.916	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-18797	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-38075	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-38099	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	207660	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	207707	-	AK124445 TSC_hg19_v1_chr19_-_2717420	222314	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr2	43458231	43458364	reg1040474.p1	3.916	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-4555	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-4567	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-4952	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	364851	-	TSC_hg19_v1_chr2_+_43864411 BC063310	406116	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	406142	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.637887	CTCF.p2:10:0.638
chr3	105555057	105555139	reg1025096.p1	3.916	+	CR749655 TSC_hg19_v1_chr3_-_105421064	-134044	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-469276	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	-469518	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	32709	-	TSC_hg19_v1_chr3_-_106959482 BC036229	1404381	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	1404494	+	CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595	0.0	
chr3	10745746	10745838	reg1037289.p1	3.916	+	AB210008 TSC_hg19_v1_chr3_-_10547352	-198446	-	AK308898 NM_001001331 NM_001683 TSC_hg19_v1_chr3_-_10547271	-198523	-	TSC_hg19_v1_chr3_-_10547221 M97260	-198559	-	L20977 TSC_hg19_v1_chr3_-_10749723	3930	-	TSC_hg19_v1_chr3_+_10857912 AK312719 BC036083 NM_014229 S75989 AB527355	112115	+	NM_003042 TSC_hg19_v1_chr3_+_11034421	288629	+	AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##M97260|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##L20977|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1	0.022482	
chr3	151986344	151986512	reg1032004.p1	3.916	+	NM_021038 NM_207292	-600	+	TSC_hg19_v1_chr3_+_151591430 AK290420 NM_033050 BC030948 AF247785	-394975	+	NM_001086 L32179 BC020706 AK290628 BC032309 CU689322	-454524	+	TSC_hg19_v1_chr3_+_151986753 BC050535 BC043493	314	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	917	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	30765	+	NM_021038|MBNL1|4154|muscleblind-like (Drosophila)##NM_207292|MBNL1|4154|muscleblind-like (Drosophila)##AK290420|SUCNR1|56670|succinate receptor 1##NM_033050|SUCNR1|56670|succinate receptor 1##BC030948|SUCNR1|56670|succinate receptor 1##AF247785|SUCNR1|56670|succinate receptor 1##NM_001086|AADAC|13|arylacetamide deacetylase (esterase)##L32179|AADAC|13|arylacetamide deacetylase (esterase)##BC020706|AADAC|13|arylacetamide deacetylase (esterase)##AK290628|AADAC|13|arylacetamide deacetylase (esterase)##BC032309|AADAC|13|arylacetamide deacetylase (esterase)##BC050535|MBNL1|4154|muscleblind-like (Drosophila)##BC043493|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)	0.0	
chr6	150859284	150859396	reg1034631.p2	3.916	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	-169182	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-395099	+	AY027538 AF346596 AB052908 AB590715 AF304379 BC098127 NM_024518 AK297815 AK302076	-469127	-	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	61680	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	327492	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	327581	+	AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AY027538|ULBP3|79465|UL16 binding protein 3##AF346596|ULBP3|79465|UL16 binding protein 3##AB052908|ULBP3|79465|UL16 binding protein 3##AF304379|ULBP3|79465|UL16 binding protein 3##BC098127|ULBP3|79465|UL16 binding protein 3##NM_024518|ULBP3|79465|UL16 binding protein 3##AK297815|ULBP3|79465|UL16 binding protein 3##AK302076|ULBP3|79465|UL16 binding protein 3##NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.0	
chrX	65238459	65238568	reg1038822.p1	3.916	+	TSC_hg19_v1_chrX_+_65235302 DQ680071 DQ680072	-3222	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	-350865	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	-350966	+	DQ891770 DQ894953 BC010525 AJ132502 AK293215 AK298389 AK075153 AK297050 AK301417 AK075171 NM_001100431 NM_001184830 NM_001184831 NM_007268	21389	-	NM_138737 TSC_hg19_v1_chrX_+_65382512	143962	+	TSC_hg19_v1_chrX_+_65382627 BC011561	144131	+	AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##DQ891770|VSIG4|11326|V-set and immunoglobulin domain containing 4##DQ894953|VSIG4|11326|V-set and immunoglobulin domain containing 4##BC010525|VSIG4|11326|V-set and immunoglobulin domain containing 4##AJ132502|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK293215|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK298389|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075153|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK297050|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK301417|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075171|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001100431|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184830|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184831|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_007268|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_138737|HEPH|9843|hephaestin##BC011561|HEPH|9843|hephaestin	0.0	
chr1	157126094	157126275	reg1001101.p2	3.915	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-17901	-	TSC_hg19_v1_chr1_-_157108158 L16464	-18034	-	AK131392 NM_001004341	-56585	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	396046	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	441617	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	544343	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.830288	
chr14	59485830	59485933	reg1028569.p1	3.915	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-381135	+	AK302579 NM_001244193 AK310356 AK302718	-579455	+	NM_014749 BC066647	-591150	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	169523	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	446041	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	446175	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.107673	
chr15	91209070	91209230	reg1036777.p2	3.915	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-135954	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-277611	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-277644	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	51464	+	NM_002569 X17094	202734	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	218551	+	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene	0.0	
chr16	19225400	19225492	reg1033297.p2	3.915	+	TSC_hg19_v1_chr16_+_19179561 NM_016524 BC004518 AF220560 AB527504 CU678742	-45695	+	TSC_hg19_v1_chr16_+_19125253 AK096327 NM_001034841	-100198	+	TSC_hg19_v1_chr16_+_19079232 AL136647 NM_001190983 BC043272	-146181	+	BC070101 NM_001105248 NM_001105249	196610	+	AY236494 NM_024780 BC038118 AK097718 BC027602 AK131202	242358	+	AY463154 BC014981 TSC_hg19_v1_chr16_-_19533421 AF306698 BC025273 BC001538 AF212862 BC012153 AK312912 NM_016641	307930	-	NM_016524|SYT17|51760|synaptotagmin XVII##BC004518|SYT17|51760|synaptotagmin XVII##AF220560|SYT17|51760|synaptotagmin XVII##AK096327|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##NM_001034841|ITPRIPL2|162073|inositol 1,4,5-trisphosphate receptor interacting protein-like 2##AL136647|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##NM_001190983|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC043272|COQ7|10229|coenzyme Q7 homolog, ubiquinone (yeast)##BC070101|TMC5|79838|transmembrane channel-like 5##NM_001105248|TMC5|79838|transmembrane channel-like 5##NM_001105249|TMC5|79838|transmembrane channel-like 5##AY236494|TMC5|79838|transmembrane channel-like 5##NM_024780|TMC5|79838|transmembrane channel-like 5##BC038118|TMC5|79838|transmembrane channel-like 5##AK097718|TMC5|79838|transmembrane channel-like 5##BC027602|TMC5|79838|transmembrane channel-like 5##AK131202|TMC5|79838|transmembrane channel-like 5##AY463154|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC014981|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF306698|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC025273|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC001538|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AF212862|GDE1|51573|glycerophosphodiester phosphodiesterase 1##BC012153|GDE1|51573|glycerophosphodiester phosphodiesterase 1##AK312912|GDE1|51573|glycerophosphodiester phosphodiesterase 1##NM_016641|GDE1|51573|glycerophosphodiester phosphodiesterase 1	1.284087	CTCF.p2:12:0.544	CTCF.p2:-65:0.740
chr2	37875883	37875991	reg1037166.p1	3.915	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-304124	+	BC030706 BC012820 AB015982 NM_005813	-331744	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-417091	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	22842	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	23452	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	276495	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.287756	CTCF.p2:32:0.288
chr6	130302870	130302955	reg1030299.p2	3.915	+	NM_001010876	-120497	-	BC062417 AB527432 BC017223 BC039611 TSC_hg19_v1_chr6_-_130031308 AL834511 BC073143 BC107416 BC101708 BC111940 BC143531 AK098594 AY643712 NM_033515	-271586	-	NM_000426 NM_001079823 Z26653	-1098599	+	TSC_hg19_v1_chr6_+_130339729 AK094137 NM_001007102 NM_032438 BC060845 AK290219	36813	+	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	233543	-	AK091882 AX747235 NM_001017373	241186	-	NM_001010876|C6orf191|253582|chromosome 6 open reading frame 191##BC062417|ARHGAP18|93663|Rho GTPase activating protein 18##BC017223|ARHGAP18|93663|Rho GTPase activating protein 18##BC039611|ARHGAP18|93663|Rho GTPase activating protein 18##AL834511|ARHGAP18|93663|Rho GTPase activating protein 18##BC073143|ARHGAP18|93663|Rho GTPase activating protein 18##BC107416|ARHGAP18|93663|Rho GTPase activating protein 18##BC101708|ARHGAP18|93663|Rho GTPase activating protein 18##BC111940|ARHGAP18|93663|Rho GTPase activating protein 18##BC143531|ARHGAP18|93663|Rho GTPase activating protein 18##AK098594|ARHGAP18|93663|Rho GTPase activating protein 18##AY643712|ARHGAP18|93663|Rho GTPase activating protein 18##NM_033515|ARHGAP18|93663|Rho GTPase activating protein 18##NM_000426|LAMA2|3908|laminin, alpha 2##NM_001079823|LAMA2|3908|laminin, alpha 2##Z26653|LAMA2|3908|laminin, alpha 2##AK094137|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_001007102|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##NM_032438|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC060845|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##AK290219|L3MBTL3|84456|l(3)mbt-like 3 (Drosophila)##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3	0.682079	CTCF.p2:28:0.682
chr6	702231	702314	reg1031877.p1	3.915	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-9182	-	AF508547 BC101697 BC101699 NM_148959	-45319	-	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-310508	+	BC053850 NM_033260	610402	+	NM_001452 U13220 AB463646	687853	+	BC134421 NM_001453	908408	+	AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1	0.984021	CTCF.p2:16:0.984
chrX	85302999	85303065	reg1033734.p2	3.915	+	AK299323 BC032237 BC130494 BC130496 AK291160 AK312443 NM_000390 NM_001145414 X78121	-481	-	TSC_hg19_v1_chrX_-_84634749 AF309774 NM_024921	-668283	-	TSC_hg19_v1_chrX_-_84634671 AK314295 AK025039 AK290360 BC017500	-668336	-	TSC_hg19_v1_chrX_+_85403454 AK290596 NM_001139514 NM_053281	100420	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	100433	+	AK055953 AK298787 NM_001139515	214938	+	AK299323|CHM|1121|choroideremia (Rab escort protein 1)##BC032237|CHM|1121|choroideremia (Rab escort protein 1)##BC130494|CHM|1121|choroideremia (Rab escort protein 1)##BC130496|CHM|1121|choroideremia (Rab escort protein 1)##AK291160|CHM|1121|choroideremia (Rab escort protein 1)##AK312443|CHM|1121|choroideremia (Rab escort protein 1)##NM_000390|CHM|1121|choroideremia (Rab escort protein 1)##NM_001145414|CHM|1121|choroideremia (Rab escort protein 1)##X78121|CHM|1121|choroideremia (Rab escort protein 1)##AF309774|POF1B|79983|premature ovarian failure, 1B##NM_024921|POF1B|79983|premature ovarian failure, 1B##AK314295|POF1B|79983|premature ovarian failure, 1B##AK025039|POF1B|79983|premature ovarian failure, 1B##AK290360|POF1B|79983|premature ovarian failure, 1B##BC017500|POF1B|79983|premature ovarian failure, 1B##AK290596|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139514|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_053281|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)##AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)	0.0	
chrY	1577078	1577258	reg1028497.p2	3.915	+	AK301844 NM_001173473	-54517	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-55367	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-116199	-	BC043610 GQ280263 NM_178129 AK126147	28870	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	83361	+	NM_004043 U11090	87179	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.407424	CTCF.p2:85:0.407
chr10	85920571	85920663	reg1035403.p1	3.914	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	-21360	+	DQ857894 NM_001165973	-2283175	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-2285535	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	11175	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	12942	+	AB593154 TSC_hg19_v1_chr10_+_85954408 AB593155 BC038799 NM_001171971 NM_033100 AB463200 AB053448	33836	+	NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99##AB593154|CDHR1|92211|cadherin-related family member 1##AB593155|CDHR1|92211|cadherin-related family member 1##BC038799|CDHR1|92211|cadherin-related family member 1##NM_001171971|CDHR1|92211|cadherin-related family member 1##NM_033100|CDHR1|92211|cadherin-related family member 1##AB053448|CDHR1|92211|cadherin-related family member 1	0.920603	CTCF.p2:4:0.921
chr11	925644	925744	reg1030129.p1	3.914	+	NM_001142675	-10637	-	AY037151 TSC_hg19_v1_chr11_-_910842 NM_001142674 NM_001142676 NM_001142677 NM_023947	-14841	-	TSC_hg19_v1_chr11_-_910811 AF212229 AK075413 AK225025 BC095409 AK297743 AK027711	-14884	-	TSC_hg19_v1_chr11_+_925869 NM_001242837 NM_012305	138	+	TSC_hg19_v1_chr11_+_925876 AK001986 AK223558 BC006155	192	+	AK027891 TSC_hg19_v1_chr11_+_925899 AK293763	232	+	NM_001142675|CHID1|66005|chitinase domain containing 1##AY037151|CHID1|66005|chitinase domain containing 1##NM_001142674|CHID1|66005|chitinase domain containing 1##NM_001142676|CHID1|66005|chitinase domain containing 1##NM_001142677|CHID1|66005|chitinase domain containing 1##NM_023947|CHID1|66005|chitinase domain containing 1##AF212229|CHID1|66005|chitinase domain containing 1##AK075413|CHID1|66005|chitinase domain containing 1##AK225025|CHID1|66005|chitinase domain containing 1##BC095409|CHID1|66005|chitinase domain containing 1##AK297743|CHID1|66005|chitinase domain containing 1##AK027711|CHID1|66005|chitinase domain containing 1##NM_001242837|AP2A2|161|adaptor-related protein complex 2, alpha 2 subunit##NM_012305|AP2A2|161|adaptor-related protein complex 2, alpha 2 subunit##AK001986|AP2A2|161|adaptor-related protein complex 2, alpha 2 subunit##AK223558|AP2A2|161|adaptor-related protein complex 2, alpha 2 subunit##BC006155|AP2A2|161|adaptor-related protein complex 2, alpha 2 subunit##AK027891|AP2A2|161|adaptor-related protein complex 2, alpha 2 subunit##AK293763|AP2A2|161|adaptor-related protein complex 2, alpha 2 subunit	0.994748	CTCF.p2:17:0.995
chr14	103285703	103285852	reg1034282.p2	3.914	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	-41877	+	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	-41958	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-226616	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	103221	+	TSC_hg19_v1_chr14_-_103430941 BX248752	145181	-	AB384568 TSC_hg19_v1_chr14_-_103523568	237764	-	AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AF155595|RCOR1|23186|REST corepressor 1##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)##BX248752|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)	0.0	
chr16	82687477	82687562	reg1029158.p1	3.914	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-26850	+	AK304592 TSC_hg19_v1_chr16_+_82660573 AK295886 AK298612 AK307862 EU190357 EU190358 BC028624 BC030653	-26930	+	TSC_hg19_v1_chr16_+_82660390 NM_001220488 NM_001220489 NM_001220490 NM_001220491 NM_001220492 NM_001257	-27125	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	1154081	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	1154137	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	1245250	+	AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##AK304592|CDH13|1012|cadherin 13, H-cadherin (heart)##AK295886|CDH13|1012|cadherin 13, H-cadherin (heart)##AK298612|CDH13|1012|cadherin 13, H-cadherin (heart)##AK307862|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190357|CDH13|1012|cadherin 13, H-cadherin (heart)##EU190358|CDH13|1012|cadherin 13, H-cadherin (heart)##BC028624|CDH13|1012|cadherin 13, H-cadherin (heart)##BC030653|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220488|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220489|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220490|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220491|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001220492|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001257|CDH13|1012|cadherin 13, H-cadherin (heart)##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase	0.0	
chr2	127844441	127844621	reg1028188.p1	3.914	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-430739	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-430824	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-3061667	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	20210	-	BC039307 NM_001001665	118811	-	AK131190 TSC_hg19_v1_chr2_-_127977781	133186	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.0	
chr2	89249679	89249769	reg1035579.p2	3.914	+	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	-64634	+	S49006 TSC_hg19_v1_chr2_-_89165772	-84012	-	BX648045 TSC_hg19_v1_chr2_+_89065391 AL137717 BC031698	-184323	+	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	42689	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	192865	-	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	263509	-	BX648045|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AL137717|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##BC031698|ANKRD36BP2|645784|ankyrin repeat domain 36B pseudogene 2##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##BC070336|IGKC|3514|immunoglobulin kappa constant	0.892724	CTCF.p2:7:0.893
chr3	136471883	136471975	reg1005600.p2	3.914	+	TSC_hg19_v1_chr3_-_136471221 BC040708 AB210023 AK309934 BC064699 CR749247 NM_005862	-714	-	S67325 TSC_hg19_v1_chr3_+_135969193 BC013768 AB209009 BC053661 AK295312 AK130359 AK225733 AK303079 AK225215 AL831978 CU680676	-502727	+	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	-502765	+	BC050423 NM_001097599 NM_001097600 NM_025246 TSC_hg19_v1_chr3_+_136537897 BC022557 AK314079 BC000111 AL136661	65990	+	TSC_hg19_v1_chr3_+_136581071 NM_006153 BC006403	109111	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	109163	+	BC040708|STAG1|10274|stromal antigen 1##AB210023|STAG1|10274|stromal antigen 1##AK309934|STAG1|10274|stromal antigen 1##BC064699|STAG1|10274|stromal antigen 1##CR749247|STAG1|10274|stromal antigen 1##NM_005862|STAG1|10274|stromal antigen 1##S67325|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC013768|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AB209009|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC053661|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK295312|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK130359|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225733|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK303079|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225215|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AL831978|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC050423|TMEM22|80723|transmembrane protein 22##NM_001097599|TMEM22|80723|transmembrane protein 22##NM_001097600|TMEM22|80723|transmembrane protein 22##NM_025246|TMEM22|80723|transmembrane protein 22##BC022557|TMEM22|80723|transmembrane protein 22##AK314079|TMEM22|80723|transmembrane protein 22##BC000111|TMEM22|80723|transmembrane protein 22##AL136661|TMEM22|80723|transmembrane protein 22##NM_006153|NCK1|4690|NCK adaptor protein 1##BC006403|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1	0.0	
chr3	39194880	39195009	reg1022523.p2	3.914	+	NM_001105513 NM_145755 AJ487015 BC062621 BC129948 AK022483 BC039691 AK302408 AK302465 CU687576	-45705	+	TSC_hg19_v1_chr3_-_39149122 BC075854 AK001574 AK057043 AJ409349 NM_031899 AK303847	-45818	-	CU687304 AB527597 TSC_hg19_v1_chr3_-_39149103 BC064624 AK300271 BC103826 BC103827 BC008928	-45873	-	TSC_hg19_v1_chr3_-_39195053 BC038949 AB053121 BC028213	107	-	NM_033027 TSC_hg19_v1_chr3_-_39195146	180	-	BC127119 BC139782 AY375160 NM_194293 TSC_hg19_v1_chr3_-_39234085 AJ626899 AJ626900 NM_001198621 AK096421 BX648565 CR749430	39141	-	NM_001105513|TTC21A|199223|tetratricopeptide repeat domain 21A##NM_145755|TTC21A|199223|tetratricopeptide repeat domain 21A##AJ487015|TTC21A|199223|tetratricopeptide repeat domain 21A##BC062621|TTC21A|199223|tetratricopeptide repeat domain 21A##BC129948|TTC21A|199223|tetratricopeptide repeat domain 21A##AK022483|TTC21A|199223|tetratricopeptide repeat domain 21A##BC039691|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302408|TTC21A|199223|tetratricopeptide repeat domain 21A##AK302465|TTC21A|199223|tetratricopeptide repeat domain 21A##BC075854|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK001574|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK057043|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AJ409349|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##NM_031899|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK303847|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC064624|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##AK300271|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103826|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC103827|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC008928|GORASP1|64689|golgi reassembly stacking protein 1, 65kDa##BC038949|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##AB053121|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC028213|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##NM_033027|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC127119|XIRP1|165904|xin actin-binding repeat containing 1##BC139782|XIRP1|165904|xin actin-binding repeat containing 1##AY375160|XIRP1|165904|xin actin-binding repeat containing 1##NM_194293|XIRP1|165904|xin actin-binding repeat containing 1##AJ626899|XIRP1|165904|xin actin-binding repeat containing 1##AJ626900|XIRP1|165904|xin actin-binding repeat containing 1##NM_001198621|XIRP1|165904|xin actin-binding repeat containing 1##AK096421|XIRP1|165904|xin actin-binding repeat containing 1##BX648565|XIRP1|165904|xin actin-binding repeat containing 1##CR749430|XIRP1|165904|xin actin-binding repeat containing 1	0.079884	
chr4	153618144	153618218	reg1028918.p1	3.914	+	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	-16981	-	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	-160748	+	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	-161887	-	BC037869 NM_145720	82722	-	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	82840	+	TSC_hg19_v1_chr4_+_153701117 AK290472 U52521 BC103759 BC105114 BC105116 BC143675 BC143676 AK096509	82946	+	BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154##AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##BC037869|TIGD4|201798|tigger transposable element derived 4##NM_145720|TIGD4|201798|tigger transposable element derived 4##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK290472|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##U52521|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC103759|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105114|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105116|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143675|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143676|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK096509|ARFIP1|27236|ADP-ribosylation factor interacting protein 1	0.0	
chr4	87860892	87861049	reg1029138.p1	3.914	+	TSC_hg19_v1_chr4_+_87857481 L13743	-3487	+	TSC_hg19_v1_chr4_+_87856199 AK296149 NM_001166693 AK300364 BC017432 AK302199	-4755	+	BC016746 BC063410 NM_144645	-47410	-	TSC_hg19_v1_chr4_+_87928422 L13773 BC114930 NM_005935 AK296243 L25050 AB385236	67351	+	TSC_hg19_v1_chr4_+_87968211 AF177238 AF177239	107281	+	BC041901 TSC_hg19_v1_chr4_-_88141661 BX640727 BX538173 NM_020803 CR749265 BX640744 BX647454 BC041384	280692	-	AK296149|AFF1|4299|AF4/FMR2 family, member 1##NM_001166693|AFF1|4299|AF4/FMR2 family, member 1##AK300364|AFF1|4299|AF4/FMR2 family, member 1##BC017432|AFF1|4299|AF4/FMR2 family, member 1##BC016746|C4orf36|132989|chromosome 4 open reading frame 36##BC063410|C4orf36|132989|chromosome 4 open reading frame 36##NM_144645|C4orf36|132989|chromosome 4 open reading frame 36##L13773|AFF1|4299|AF4/FMR2 family, member 1##BC114930|AFF1|4299|AF4/FMR2 family, member 1##NM_005935|AFF1|4299|AF4/FMR2 family, member 1##AK296243|AFF1|4299|AF4/FMR2 family, member 1##L25050|AFF1|4299|AF4/FMR2 family, member 1##AF177238|AFF1|4299|AF4/FMR2 family, member 1##AF177239|AFF1|4299|AF4/FMR2 family, member 1##BC041901|KLHL8|57563|kelch-like 8 (Drosophila)##BX640727|KLHL8|57563|kelch-like 8 (Drosophila)##BX538173|KLHL8|57563|kelch-like 8 (Drosophila)##NM_020803|KLHL8|57563|kelch-like 8 (Drosophila)##CR749265|KLHL8|57563|kelch-like 8 (Drosophila)##BX640744|KLHL8|57563|kelch-like 8 (Drosophila)##BX647454|KLHL8|57563|kelch-like 8 (Drosophila)##BC041384|KLHL8|57563|kelch-like 8 (Drosophila)	0.0	
chr5	14212385	14212521	reg1031615.p1	3.914	+	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	-68781	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-200583	-	AX800026 AY045575 NM_001369	-267865	-	TSC_hg19_v1_chr5_+_14488527 AK131423	276086	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	369447	+	TSC_hg19_v1_chr5_+_14581949 AK001989 BC011524 CU679940	369511	+	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A##AK001989|FAM105A|54491|family with sequence similarity 105, member A##BC011524|FAM105A|54491|family with sequence similarity 105, member A	0.046358	
chr8	131054702	131054850	reg1028287.p1	3.914	+	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-25893	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-26082	-	BC016345 TSC_hg19_v1_chr8_-_131028667	-26117	-	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	401255	-	NM_001115	998058	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1861581	+	AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B##NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.0	
chr9	67926560	67926674	reg1015530.p2	3.914	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-1373342	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-1432421	-	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	-1468121	-	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	199	+	TSC_hg19_v1_chr9_+_68726468 AK311167	799885	+	TSC_hg19_v1_chr9_+_69065493 AK311167	1138921	+	BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene	0.0	
chr1	173446147	173446214	reg1038370.p2	3.913	+	CR542033 D90224 X79929 NM_003326	-269788	-	AK297932 TSC_hg19_v1_chr1_-_173174619 BC041663	-271527	-	AF117713 AF125303 BC069111 BC069319 CU686747 AY358868 AK313273 BC093986 BC112032 NM_005092	-426124	-	TSC_hg19_v1_chr1_-_173446300 AK127238	128	-	TSC_hg19_v1_chr1_+_173446473 AK300680	293	+	TSC_hg19_v1_chr1_+_173446484 BC035857 NM_004905 AK289352 BC025421 D14662 BC053550 CU690218 AJ844621	347	+	CR542033|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##D90224|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##X79929|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##NM_003326|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AK297932|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##BC041663|TNFSF4|7292|tumor necrosis factor (ligand) superfamily, member 4##AF117713|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AF125303|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069111|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC069319|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AY358868|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK313273|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC093986|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##BC112032|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##NM_005092|TNFSF18|8995|tumor necrosis factor (ligand) superfamily, member 18##AK127238|LOC100506023|100506023|uncharacterized LOC100506023##AK300680|PRDX6|9588|peroxiredoxin 6##BC035857|PRDX6|9588|peroxiredoxin 6##NM_004905|PRDX6|9588|peroxiredoxin 6##AK289352|PRDX6|9588|peroxiredoxin 6##BC025421|PRDX6|9588|peroxiredoxin 6##D14662|PRDX6|9588|peroxiredoxin 6##BC053550|PRDX6|9588|peroxiredoxin 6##AJ844621|PRDX6|9588|peroxiredoxin 6	0.108779	
chr16	29479409	29479500	reg1033298.p2	3.913	+	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	-8228	+	BC022832 NM_001031827 NM_001039182	-13170	-	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	-13603	+	CU687812 AK304513 TSC_hg19_v1_chr16_-_29606405	126891	-	TSC_hg19_v1_chr16_-_29606667 AK316536	127219	-	AB040413 AB055226 TSC_hg19_v1_chr16_-_29625045	145588	-	AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK304513|LOC440354|440354|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene	0.261405	CTCF.p2:2:0.211
chr16	30583226	30583358	reg1033402.p2	3.913	+	EU446577 TSC_hg19_v1_chr16_-_30583034 BC018997	-270	-	EU446557 BC008821 AK093992 AX748400 NM_001172679 NM_033410 TSC_hg19_v1_chr16_-_30569709	-13684	-	TSC_hg19_v1_chr16_-_30546234 AB209546 AK299308 AK054567 BC001361 NM_023931 AK316254	-37102	-	NM_001024683 NM_145271	435	-	TSC_hg19_v1_chr16_-_30597103 AK309511 EU446576 AK292465 BC040642 AK298848 AK056692 NM_152458	13683	-	AK310459 AB065282 BC014000 NM_138447 TSC_hg19_v1_chr16_-_30621684	38364	-	EU446577|ZNF688|146542|zinc finger protein 688##BC018997|ZNF688|146542|zinc finger protein 688##EU446557|ZNF764|92595|zinc finger protein 764##BC008821|ZNF764|92595|zinc finger protein 764##AK093992|ZNF764|92595|zinc finger protein 764##NM_001172679|ZNF764|92595|zinc finger protein 764##NM_033410|ZNF764|92595|zinc finger protein 764##AB209546|ZNF747|65988|zinc finger protein 747##AK054567|ZNF747|65988|zinc finger protein 747##BC001361|ZNF747|65988|zinc finger protein 747##NM_023931|ZNF747|65988|zinc finger protein 747##NM_001024683|ZNF688|146542|zinc finger protein 688##NM_145271|ZNF688|146542|zinc finger protein 688##AK309511|ZNF785|146540|zinc finger protein 785##EU446576|ZNF785|146540|zinc finger protein 785##AK292465|ZNF785|146540|zinc finger protein 785##BC040642|ZNF785|146540|zinc finger protein 785##AK298848|ZNF785|146540|zinc finger protein 785##AK056692|ZNF785|146540|zinc finger protein 785##NM_152458|ZNF785|146540|zinc finger protein 785##AK310459|ZNF689|115509|zinc finger protein 689##AB065282|ZNF689|115509|zinc finger protein 689##BC014000|ZNF689|115509|zinc finger protein 689##NM_138447|ZNF689|115509|zinc finger protein 689	0.0	
chr19	1207995	1208083	reg1027512.p2	3.913	+	BC146278 BC148727 TSC_hg19_v1_chr19_+_1207211	-866	+	BC007981 AF035625 BC019334 AK314858 AB209553 EF644172 DQ893232 DQ896561 AB528360 CU675883 U63333 TSC_hg19_v1_chr19_+_1206921	-1348	+	TSC_hg19_v1_chr19_+_1205777 NM_000455 AF217978	-2233	+	BC028156 NM_152769	29875	-	TSC_hg19_v1_chr19_+_1241763 BC002389 BC004426 BC018817 NM_001001975 NM_001687	33713	+	AK094357 S87916 S87918 X63422 X63423 TSC_hg19_v1_chr19_+_1241766	33727	+	BC146278|EFNA2|1943|ephrin-A2##BC148727|EFNA2|1943|ephrin-A2##BC007981|STK11|6794|serine/threonine kinase 11##AF035625|STK11|6794|serine/threonine kinase 11##BC019334|STK11|6794|serine/threonine kinase 11##AK314858|STK11|6794|serine/threonine kinase 11##AB209553|STK11|6794|serine/threonine kinase 11##EF644172|STK11|6794|serine/threonine kinase 11##DQ893232|STK11|6794|serine/threonine kinase 11##DQ896561|STK11|6794|serine/threonine kinase 11##U63333|STK11|6794|serine/threonine kinase 11##NM_000455|STK11|6794|serine/threonine kinase 11##AF217978|STK11|6794|serine/threonine kinase 11##BC028156|C19orf26|255057|chromosome 19 open reading frame 26##NM_152769|C19orf26|255057|chromosome 19 open reading frame 26##BC002389|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC004426|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC018817|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001001975|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001687|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##AK094357|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87916|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87918|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63422|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63423|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	0.23184	
chr2	143398320	143398420	reg1027706.p2	3.913	+	AF176832 NM_018557	-509101	-	TSC_hg19_v1_chr2_-_142888540 AK054663	-509814	-	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-3860564	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	236836	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	236870	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	488560	+	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15	0.794446	CTCF.p2:9:0.794
chr5	172386274	172386444	reg1029401.p1	3.913	+	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	-125041	+	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	-188148	-	AF275799 TSC_hg19_v1_chr5_-_172083715	-302716	-	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	89	+	NM_003945 TSC_hg19_v1_chr5_+_172410801 BC119715 BC119714 AK312068 Y15286	24423	+	TSC_hg19_v1_chr5_+_172410833 CR456856 CR542131	24485	+	NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1##NM_003945|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119715|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119714|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##AK312068|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##Y15286|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR456856|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##CR542131|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1	0.0	
chr7	42925895	42926016	reg1040844.p1	3.913	+	TSC_hg19_v1_chr7_-_42276797 AK308429	-649160	-	NM_000168	-649338	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-1183270	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	25634	-	BC002900 AB528708 CR450317 CU690460 D00760 BC047697 TSC_hg19_v1_chr7_-_42971774 AK311369 BX641097 AK222976	45798	-	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	45846	-	AK308429|GLI3|2737|GLI family zinc finger 3##NM_000168|GLI3|2737|GLI family zinc finger 3##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25##BC002900|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##CR450317|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##D00760|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC047697|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BX641097|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK222976|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2	0.868976	CTCF.p2:9:0.869
chr9	123239802	123239933	reg1036164.p1	3.913	+	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	-1108209	-	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-2773180	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	-2773253	+	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	102486	-	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	236850	-	AF176698 TSC_hg19_v1_chr9_-_123555558	315678	-	BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9##AF176698|FBXW2|26190|F-box and WD repeat domain containing 2	0.437223	CTCF.p2:24:0.437
chr9	132650877	132650991	reg1031304.p1	3.913	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-53169	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-53212	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-53250	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	154420	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	154554	-	BC039728 NM_001136557 NM_001136558 NM_020960	165050	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr10	27026734	27026871	reg1037401.p1	3.912	+	TSC_hg19_v1_chr10_+_26986597 AK024802 AK223414 AB210838 NM_014317 BC063635 BC049211 AF118395	-40156	+	AK096048 TSC_hg19_v1_chr10_-_26986612	-40218	-	TSC_hg19_v1_chr10_+_26727703 AY152730	-299096	+	TSC_hg19_v1_chr10_-_27057776 AK315914	31015	-	AB529081 FJ380057 FJ380058 FJ380059 TSC_hg19_v1_chr10_-_27149883 AF540955 AK296751 AF001628 AF006516 BC013238 U87166 AB209268 BC024254 AK291823	123038	-	TSC_hg19_v1_chr10_-_27149916 AF260262 AK298646 AK126803 AB040151	123137	-	AK024802|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AK223414|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AB210838|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##NM_014317|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC063635|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##BC049211|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AF118395|PDSS1|23590|prenyl (decaprenyl) diphosphate synthase, subunit 1##AY152730|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK315914|ABI1|10006|abl-interactor 1##FJ380057|ABI1|10006|abl-interactor 1##FJ380058|ABI1|10006|abl-interactor 1##FJ380059|ABI1|10006|abl-interactor 1##AF540955|ABI1|10006|abl-interactor 1##AK296751|ABI1|10006|abl-interactor 1##AF001628|ABI1|10006|abl-interactor 1##AF006516|ABI1|10006|abl-interactor 1##BC013238|ABI1|10006|abl-interactor 1##U87166|ABI1|10006|abl-interactor 1##AB209268|ABI1|10006|abl-interactor 1##BC024254|ABI1|10006|abl-interactor 1##AK291823|ABI1|10006|abl-interactor 1##AF260262|ABI1|10006|abl-interactor 1##AK298646|ABI1|10006|abl-interactor 1##AK126803|ABI1|10006|abl-interactor 1##AB040151|ABI1|10006|abl-interactor 1	0.0	
chr10	42679312	42679449	reg1042876.p1	3.912	+	TSC_hg19_v1_chr10_-_38691741 BC171738 BC042387 BC048143	-3987624	-	AK295332 AY829267 AF165514 AF165517 BC071987 TSC_hg19_v1_chr10_+_38645320 AK293968 AK307174 CU687208	-4034043	+	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	-4296097	+	TSC_hg19_v1_chr10_-_42863441 AF519622 AK131313	184083	-	AX721135 TSC_hg19_v1_chr10_-_43048257 AK308832 AK026980 BC045697 AX721116	368822	-	TSC_hg19_v1_chr10_-_43134018 BC109232 BC160932 BC065181 BC107726 BC048313 AJ491697 NM_006955 AK096683 AK309564 AK304306 BC036398	454618	-	BC171738|SEPT7L|285961|septin 7-like##BC042387|SEPT7L|285961|septin 7-like##BC048143|SEPT7L|285961|septin 7-like##AK295332|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AY829267|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165514|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AF165517|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##BC071987|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK293968|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##AK307174|HSD17B7P2|158160|hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A##AF519622|LOC441666|441666|zinc finger protein 91 pseudogene##AK308832|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##AK026980|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC045697|ZNF37BP|100129482|zinc finger protein 37B, pseudogene##BC109232|ZNF33B|7582|zinc finger protein 33B##BC160932|ZNF33B|7582|zinc finger protein 33B##BC065181|ZNF33B|7582|zinc finger protein 33B##BC107726|ZNF33B|7582|zinc finger protein 33B##BC048313|ZNF33B|7582|zinc finger protein 33B##AJ491697|ZNF33B|7582|zinc finger protein 33B##NM_006955|ZNF33B|7582|zinc finger protein 33B##AK096683|ZNF33B|7582|zinc finger protein 33B##AK309564|ZNF33B|7582|zinc finger protein 33B##AK304306|ZNF33B|7582|zinc finger protein 33B##BC036398|ZNF33B|7582|zinc finger protein 33B	0.0	
chr11	39147335	39147428	reg1035789.p1	3.912	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-2527579	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-2531277	+	NM_000448 M29474	-2557813	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	1167213	-	AB046800 NM_020929	1168282	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	4186137	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.0	
chr11	48009192	48009293	reg1035622.p1	3.912	+	TSC_hg19_v1_chr11_+_48002270 AL359057 BC063417	-6883	+	D37781 TSC_hg19_v1_chr11_+_48002120	-7122	+	TSC_hg19_v1_chr11_+_48002110 NM_001098503 NM_002843 U10886	-7151	+	NM_001005470	229119	+	BC136935 BC136936 NM_001004727	257389	+	NM_001004726	276170	+	AL359057|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##BC063417|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##D37781|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_001098503|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_002843|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##U10886|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_001005470|OR4B1|119765|olfactory receptor, family 4, subfamily B, member 1##BC136935|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##BC136936|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##NM_001004727|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##NM_001004726|OR4X1|390113|olfactory receptor, family 4, subfamily X, member 1	0.0	
chr13	32487735	32487830	reg1030897.p1	3.912	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-66880	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-174069	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-713572	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	117659	+	BC146956 BC146965 NM_001136571	398307	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	401835	+	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset	0.360432	CTCF.p2:-13:0.360
chr15	45497584	45497663	reg1010582.p2	3.912	+	AK096267 NM_138356	-4251	-	TSC_hg19_v1_chr15_-_45480165 AK094391 AK303749	-17459	-	AK290372 AF213465 NM_017434 NM_175940 AK075268 AF230495 BC114628 BC114938	-75457	+	AK222709 NM_004212 U84392 AK291974	46818	+	TSC_hg19_v1_chr15_-_45670743 CU678590 S68805 BC004141 AK098055 AK223585 AK294995 AK298350	173116	-	TSC_hg19_v1_chr15_-_45670958 NM_001482	173344	-	AK096267|SHF|90525|Src homology 2 domain containing F##NM_138356|SHF|90525|Src homology 2 domain containing F##AK094391|SHF|90525|Src homology 2 domain containing F##AK303749|SHF|90525|Src homology 2 domain containing F##AK290372|DUOX1|53905|dual oxidase 1##AF213465|DUOX1|53905|dual oxidase 1##NM_017434|DUOX1|53905|dual oxidase 1##NM_175940|DUOX1|53905|dual oxidase 1##AK075268|DUOX1|53905|dual oxidase 1##AF230495|DUOX1|53905|dual oxidase 1##BC114628|DUOX1|53905|dual oxidase 1##BC114938|DUOX1|53905|dual oxidase 1##AK222709|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##NM_004212|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##U84392|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK291974|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##NM_001482|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	0.936585	
chr15	80193331	80193441	reg1029898.p2	3.912	+	NM_001199758	-3760	-	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	-4006	-	AB028947 NM_015206 BC152466	-468527	+	AL109714 NM_001100879	14211	-	NM_001199760	22061	-	NM_001100880 NM_001199757	22277	-	NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##AL109714|ST20|400410|suppressor of tumorigenicity 20##NM_001100879|ST20|400410|suppressor of tumorigenicity 20##NM_001199760|ST20-MTHFS|100528021|ST20-MTHFS readthrough##NM_001100880|ST20|400410|suppressor of tumorigenicity 20##NM_001199757|ST20|400410|suppressor of tumorigenicity 20	0.046607	
chr17	27224589	27224769	reg1032111.p3	3.912	+	M60922 CU678570 AB528533 BC003683 TSC_hg19_v1_chr17_-_27224641	-71	-	TSC_hg19_v1_chr17_+_27182033 AB049388 AK023342 AY007435 BX537542 BC019094 NM_005702 CU676380 DQ892626 DQ895866 AF082657 AF082658	-42656	+	BC021228 TSC_hg19_v1_chr17_-_27169811 BX647766 AK299477 AK001562 AK057665 NM_001077498 NM_018182	-54889	-	TSC_hg19_v1_chr17_-_27224717 NM_004475	33	-	AX795344 TSC_hg19_v1_chr17_-_27229986 AX795345 AX795340 AX795338 AX795342 BC015582 AX795337 AX795341 AX795339 AX795335 AX795336 AK296017 AX795346 AX795343 AY358566 NM_144683	5326	-	TSC_hg19_v1_chr17_-_27240983 AK024290	16334	-	M60922|FLOT2|2319|flotillin 2##BC003683|FLOT2|2319|flotillin 2##AB049388|ERAL1|26284|Era G-protein-like 1 (E. coli)##AK023342|ERAL1|26284|Era G-protein-like 1 (E. coli)##AY007435|ERAL1|26284|Era G-protein-like 1 (E. coli)##BX537542|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC019094|ERAL1|26284|Era G-protein-like 1 (E. coli)##NM_005702|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ892626|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ895866|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082657|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082658|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC021228|C17orf63|55731|chromosome 17 open reading frame 63##BX647766|C17orf63|55731|chromosome 17 open reading frame 63##AK299477|C17orf63|55731|chromosome 17 open reading frame 63##AK001562|C17orf63|55731|chromosome 17 open reading frame 63##AK057665|C17orf63|55731|chromosome 17 open reading frame 63##NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63##NM_018182|C17orf63|55731|chromosome 17 open reading frame 63##NM_004475|FLOT2|2319|flotillin 2##BC015582|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AK296017|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AY358566|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##NM_144683|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AK024290|PHF12|57649|PHD finger protein 12	0.0	
chr17	55813216	55813338	reg1034565.p1	3.912	+	AK093888 AX748353 NM_170721	-478904	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-479304	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-650134	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	114127	-	AK000746 NM_017949	167472	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	219399	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.033536	
chr3	113932652	113932798	reg1035835.p2	3.912	+	AY228457 AY228458 NM_000796 NM_033663 AY228454	-34809	-	TSC_hg19_v1_chr3_+_113775661 AK023022	-157051	+	TSC_hg19_v1_chr3_+_113775628 AK299313 BC039265 NM_024638 AL833709 AK296938	-157119	+	NM_007136 X65233	23699	-	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	80128	+	AF139460 NM_001164342	169763	-	AY228457|DRD3|1814|dopamine receptor D3##AY228458|DRD3|1814|dopamine receptor D3##NM_000796|DRD3|1814|dopamine receptor D3##NM_033663|DRD3|1814|dopamine receptor D3##AY228454|DRD3|1814|dopamine receptor D3##AK023022|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AK299313|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##BC039265|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##NM_024638|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AL833709|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AK296938|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AF139460|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164342|ZBTB20|26137|zinc finger and BTB domain containing 20	0.438209	CTCF.p2:8:0.438
chr3	46990860	46991031	reg1039152.p2	3.912	+	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	-67203	+	BC112221 BC112247 NM_000316 U17418 X68596	-71696	+	AF174483 CU679491 X07373 M24122 AK312044 BC009790 NM_000258	-86020	-	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	27300	-	TSC_hg19_v1_chr3_+_47021155 NM_015175 AK131104 AB384492	30302	+	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	38525	+	BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor##BC112221|PTH1R|5745|parathyroid hormone 1 receptor##BC112247|PTH1R|5745|parathyroid hormone 1 receptor##NM_000316|PTH1R|5745|parathyroid hormone 1 receptor##U17418|PTH1R|5745|parathyroid hormone 1 receptor##X68596|PTH1R|5745|parathyroid hormone 1 receptor##AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12##NM_015175|NBEAL2|23218|neurobeachin-like 2##AK131104|NBEAL2|23218|neurobeachin-like 2##AK092871|NBEAL2|23218|neurobeachin-like 2	0.020783	
chr6	149461666	149461791	reg1029109.p2	3.912	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-393519	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-797537	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-797738	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	177375	+	AK315038 NM_015093 AK307650	177713	+	AY340238 NM_001002255 BC130305 HQ258040	259780	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr6	6547213	6547385	reg1004332.p2	3.912	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-226389	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-226414	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-539602	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	41651	+	BC039678 TSC_hg19_v1_chr6_+_6725205	177862	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	560527	+	NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1	0.0	
chr7	70229415	70229554	reg1032904.p2	3.912	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-1164896	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-1165155	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-1165648	+	TSC_hg19_v1_chr7_+_70231164 AK296981	1721	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	368304	+	AK123862 TSC_hg19_v1_chr7_-_71801809	1572294	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.0	
chr8	46958055	46958126	reg1026611.p1	3.912	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	-3810485	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-3962443	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-3962457	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	1215405	+	TSC_hg19_v1_chr8_+_48173521 AK303579	1215429	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	1215442	+	AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146	0.0	
chr10	104264669	104264840	reg1030247.p1	3.911	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	-935	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	-1035	+	CU674342 AM393135 DQ892689 DQ895934 AB462953 BC026016 TSC_hg19_v1_chr10_-_104262470 BC000693 Z14978 X82206 AK302072 AK312506 AK297362 AK297620 NM_005736	-2297	-	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	139530	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	209343	-	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	209591	+	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2	0.0	
chr10	72297553	72297664	reg1031985.p2	3.911	+	TSC_hg19_v1_chr10_+_72238575 NM_014431 AB033100 BC136375 BC136376	-58993	+	TSC_hg19_v1_chr10_-_72201438 BC104976 NM_018055 BC112025	-96157	-	BC033585 TSC_hg19_v1_chr10_-_72201372	-96242	-	BC047695 TSC_hg19_v1_chr10_-_72362497 AK312754	64861	-	BC063043 TSC_hg19_v1_chr10_-_72362518 FJ555237 NM_001083116 NM_005041	64918	-	AB462932 AF358666 AJ345098 NM_080722 NM_139155	134949	+	NM_014431|KIAA1274|27143|KIAA1274##AB033100|KIAA1274|27143|KIAA1274##BC136375|KIAA1274|27143|KIAA1274##BC136376|KIAA1274|27143|KIAA1274##BC104976|NODAL|4838|nodal homolog (mouse)##NM_018055|NODAL|4838|nodal homolog (mouse)##BC112025|NODAL|4838|nodal homolog (mouse)##BC033585|NODAL|4838|nodal homolog (mouse)##BC047695|PRF1|5551|perforin 1 (pore forming protein)##AK312754|PRF1|5551|perforin 1 (pore forming protein)##BC063043|PRF1|5551|perforin 1 (pore forming protein)##FJ555237|PRF1|5551|perforin 1 (pore forming protein)##NM_001083116|PRF1|5551|perforin 1 (pore forming protein)##NM_005041|PRF1|5551|perforin 1 (pore forming protein)##AF358666|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##AJ345098|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_080722|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_139155|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14	0.241054	CTCF.p2:-12:0.241
chr10	90694843	90695001	reg1006526.p2	3.911	+	TSC_hg19_v1_chr10_+_90640003 AK056086 BC010846 NM_020799	-54944	+	AX721211 NM_144590	-83219	-	EF426484 NM_001128215	-132436	+	J05192 X13839 BC017554 TSC_hg19_v1_chr10_-_90712531 AK300353 BC093052 AK300664 AK313294 NM_001613	17622	-	NM_000043 NM_152871 NM_152872 BC012479 TSC_hg19_v1_chr10_+_90750342	55396	+	TSC_hg19_v1_chr10_+_90750599 AK290978 X63717 M67454 X83490 X83491 X83492 X83493 DQ894675 AY495076 CR450307 EU481974 FJ373045 FJ373046 FM246457 FM246458 FM246459 X89101 Z47993 Z47994 Z47995 Z66556 Z70519 Z70520	55586	+	AK056086|STAMBPL1|57559|STAM binding protein-like 1##BC010846|STAMBPL1|57559|STAM binding protein-like 1##NM_020799|STAMBPL1|57559|STAM binding protein-like 1##NM_144590|ANKRD22|118932|ankyrin repeat domain 22##EF426484|LIPM|340654|lipase, family member M##NM_001128215|LIPM|340654|lipase, family member M##J05192|ACTA2|59|actin, alpha 2, smooth muscle, aorta##X13839|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC017554|ACTA2|59|actin, alpha 2, smooth muscle, aorta##BC093052|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK300664|ACTA2|59|actin, alpha 2, smooth muscle, aorta##AK313294|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_001613|ACTA2|59|actin, alpha 2, smooth muscle, aorta##NM_000043|FAS|355|Fas (TNF receptor superfamily, member 6)##NM_152871|FAS|355|Fas (TNF receptor superfamily, member 6)##NM_152872|FAS|355|Fas (TNF receptor superfamily, member 6)##BC012479|FAS|355|Fas (TNF receptor superfamily, member 6)##AK290978|FAS|355|Fas (TNF receptor superfamily, member 6)##X63717|FAS|355|Fas (TNF receptor superfamily, member 6)##M67454|FAS|355|Fas (TNF receptor superfamily, member 6)##X83490|FAS|355|Fas (TNF receptor superfamily, member 6)##X83491|FAS|355|Fas (TNF receptor superfamily, member 6)##X83492|FAS|355|Fas (TNF receptor superfamily, member 6)##X83493|FAS|355|Fas (TNF receptor superfamily, member 6)##DQ894675|FAS|355|Fas (TNF receptor superfamily, member 6)##AY495076|FAS|355|Fas (TNF receptor superfamily, member 6)##CR450307|FAS|355|Fas (TNF receptor superfamily, member 6)##EU481974|FAS|355|Fas (TNF receptor superfamily, member 6)##FJ373045|FAS|355|Fas (TNF receptor superfamily, member 6)##FJ373046|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246457|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246458|FAS|355|Fas (TNF receptor superfamily, member 6)##FM246459|FAS|355|Fas (TNF receptor superfamily, member 6)##X89101|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47993|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47994|FAS|355|Fas (TNF receptor superfamily, member 6)##Z47995|FAS|355|Fas (TNF receptor superfamily, member 6)##Z66556|FAS|355|Fas (TNF receptor superfamily, member 6)##Z70519|FAS|355|Fas (TNF receptor superfamily, member 6)##Z70520|FAS|355|Fas (TNF receptor superfamily, member 6)	0.0	
chr1	207884769	207884878	reg1031734.p1	3.911	+	NM_175710 BC109190 BC109191	-66336	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	-215245	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	-257162	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	40570	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	40660	+	BX640941 TSC_hg19_v1_chr1_-_208059392	174500	-	NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein	0.0	
chr12	107473081	107473161	reg1028716.p1	3.911	+	TSC_hg19_v1_chr12_-_107380925 BC036066 BC068468 AK222558 AY008301 BC050361 BC025984 AK024124 NM_001033050 NM_025198	-92223	-	AK024021 TSC_hg19_v1_chr12_+_107349684 AK001731 BC020522 AK022770	-123413	+	TSC_hg19_v1_chr12_+_107349591 NM_152261	-123524	+	BC030519 TSC_hg19_v1_chr12_-_107487328 D83702	14212	-	TSC_hg19_v1_chr12_-_107487630 NM_004075	14489	-	TSC_hg19_v1_chr12_+_107712210 BC027931 NM_001018072 BC146824	239092	+	BC036066|MTERFD3|80298|MTERF domain containing 3##BC068468|MTERFD3|80298|MTERF domain containing 3##AK222558|MTERFD3|80298|MTERF domain containing 3##AY008301|MTERFD3|80298|MTERF domain containing 3##BC050361|MTERFD3|80298|MTERF domain containing 3##BC025984|MTERFD3|80298|MTERF domain containing 3##AK024124|MTERFD3|80298|MTERF domain containing 3##NM_001033050|MTERFD3|80298|MTERF domain containing 3##NM_025198|MTERFD3|80298|MTERF domain containing 3##AK024021|C12orf23|90488|chromosome 12 open reading frame 23##AK001731|C12orf23|90488|chromosome 12 open reading frame 23##BC020522|C12orf23|90488|chromosome 12 open reading frame 23##AK022770|C12orf23|90488|chromosome 12 open reading frame 23##NM_152261|C12orf23|90488|chromosome 12 open reading frame 23##BC030519|CRY1|1407|cryptochrome 1 (photolyase-like)##D83702|CRY1|1407|cryptochrome 1 (photolyase-like)##NM_004075|CRY1|1407|cryptochrome 1 (photolyase-like)##BC027931|BTBD11|121551|BTB (POZ) domain containing 11##NM_001018072|BTBD11|121551|BTB (POZ) domain containing 11##BC146824|BTBD11|121551|BTB (POZ) domain containing 11	0.951479	CTCF.p2:7:0.951
chr1	226166147	226166284	reg1031030.p1	3.911	+	U81523 BC116448 AF081513 BC035718 AK027520 AK075344 TSC_hg19_v1_chr1_-_226128921 AK304549 NM_001172425 NM_003240 BC065929	-37184	-	AK001508 AK298845 TSC_hg19_v1_chr1_-_226111979	-54236	-	BC014868 TSC_hg19_v1_chr1_-_226111970 AF087859 BC020553 NM_013328	-54264	-	BC016290 TSC_hg19_v1_chr1_-_226187017	20787	-	TSC_hg19_v1_chr1_-_226187023 AK092701 AX747679 BX648319	20807	-	TSC_hg19_v1_chr1_-_226187045 AK291008 AK127780 BC071563 AK308441	20821	-	U81523|LEFTY2|7044|left-right determination factor 2##AF081513|LEFTY2|7044|left-right determination factor 2##BC035718|LEFTY2|7044|left-right determination factor 2##AK027520|LEFTY2|7044|left-right determination factor 2##AK075344|LEFTY2|7044|left-right determination factor 2##AK304549|LEFTY2|7044|left-right determination factor 2##NM_001172425|LEFTY2|7044|left-right determination factor 2##NM_003240|LEFTY2|7044|left-right determination factor 2##BC065929|LEFTY2|7044|left-right determination factor 2##AK001508|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC014868|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##AF087859|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC020553|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##NM_013328|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2##BC016290|C1orf55|163859|chromosome 1 open reading frame 55##AK092701|C1orf55|163859|chromosome 1 open reading frame 55##BX648319|C1orf55|163859|chromosome 1 open reading frame 55##AK291008|C1orf55|163859|chromosome 1 open reading frame 55##AK127780|C1orf55|163859|chromosome 1 open reading frame 55##BC071563|C1orf55|163859|chromosome 1 open reading frame 55##AK308441|C1orf55|163859|chromosome 1 open reading frame 55	0.307311	CTCF.p2:-28:0.307
chr13	38620068	38620179	reg1027144.p1	3.911	+	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	-176225	-	EU262883 EU262884 EU262885 EU262886 AY140646 AY918092 BC106709 BC106710 D13666 GU354210 D13665 TSC_hg19_v1_chr13_-_38172906 NM_001135934 NM_001135935 NM_001135936 NM_006475	-447202	-	BC028723 NM_145203	-940323	-	NM_016617 TSC_hg19_v1_chr13_+_38923946	303828	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	303926	+	NM_207361	641049	+	BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##EU262883|POSTN|10631|periostin, osteoblast specific factor##EU262884|POSTN|10631|periostin, osteoblast specific factor##EU262885|POSTN|10631|periostin, osteoblast specific factor##EU262886|POSTN|10631|periostin, osteoblast specific factor##AY140646|POSTN|10631|periostin, osteoblast specific factor##AY918092|POSTN|10631|periostin, osteoblast specific factor##BC106709|POSTN|10631|periostin, osteoblast specific factor##BC106710|POSTN|10631|periostin, osteoblast specific factor##D13666|POSTN|10631|periostin, osteoblast specific factor##GU354210|POSTN|10631|periostin, osteoblast specific factor##D13665|POSTN|10631|periostin, osteoblast specific factor##NM_001135934|POSTN|10631|periostin, osteoblast specific factor##NM_001135935|POSTN|10631|periostin, osteoblast specific factor##NM_001135936|POSTN|10631|periostin, osteoblast specific factor##NM_006475|POSTN|10631|periostin, osteoblast specific factor##BC028723|CSNK1A1L|122011|casein kinase 1, alpha 1-like##NM_145203|CSNK1A1L|122011|casein kinase 1, alpha 1-like##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1##NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2	1.009419	CTCF.p2:-10:0.991
chr16	14499850	14500017	reg1030281.p1	3.911	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-205735	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-219415	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-334847	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	224095	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	224200	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	226806	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.0	
chr21	36043463	36043575	reg1031193.p5	3.911	+	AF448438 AF448439 NM_053277	-1832	+	BT007363 CU678256 AF303449 U85266 TSC_hg19_v1_chr21_-_35987486 BC002864 AK092184 AX747397 NM_004414 AY325903	-56173	-	NM_203417 U85265	-56775	-	S76350 GU070939 TSC_hg19_v1_chr21_-_36231874	188317	-	S76345 S76346 GU070941 TSC_hg19_v1_chr21_-_36252995	209417	-	TSC_hg19_v1_chr21_-_36259250 EU093088	215753	-	AF448438|CLIC6|54102|chloride intracellular channel 6##AF448439|CLIC6|54102|chloride intracellular channel 6##NM_053277|CLIC6|54102|chloride intracellular channel 6##BT007363|RCAN1|1827|regulator of calcineurin 1##AF303449|RCAN1|1827|regulator of calcineurin 1##U85266|RCAN1|1827|regulator of calcineurin 1##BC002864|RCAN1|1827|regulator of calcineurin 1##AK092184|RCAN1|1827|regulator of calcineurin 1##NM_004414|RCAN1|1827|regulator of calcineurin 1##AY325903|RCAN1|1827|regulator of calcineurin 1##NM_203417|RCAN1|1827|regulator of calcineurin 1##U85265|RCAN1|1827|regulator of calcineurin 1##S76350|RUNX1|861|runt-related transcription factor 1##S76345|RUNX1|861|runt-related transcription factor 1##S76346|RUNX1|861|runt-related transcription factor 1	0.0	
chr2	62549146	62549327	reg1033428.p2	3.911	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-125970	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-416407	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-433450	-	BC047439 AK091902 AX747245 NM_198276	184303	-	AK292545 NM_001142615	351749	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	383730	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr2	9748535	9748603	reg1037500.p2	3.911	+	TSC_hg19_v1_chr2_-_9695885 U86755 U92649 BC062687 GQ402545 NM_003183 BC146658	-52650	-	TSC_hg19_v1_chr2_-_9695883 AK289829	-52686	-	TSC_hg19_v1_chr2_-_9695874 U69611 U69612	-52719	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	22044	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	22480	-	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	22556	-	U86755|ADAM17|6868|ADAM metallopeptidase domain 17##U92649|ADAM17|6868|ADAM metallopeptidase domain 17##BC062687|ADAM17|6868|ADAM metallopeptidase domain 17##GQ402545|ADAM17|6868|ADAM metallopeptidase domain 17##NM_003183|ADAM17|6868|ADAM metallopeptidase domain 17##BC146658|ADAM17|6868|ADAM metallopeptidase domain 17##AK289829|ADAM17|6868|ADAM metallopeptidase domain 17##U69611|ADAM17|6868|ADAM metallopeptidase domain 17##U69612|ADAM17|6868|ADAM metallopeptidase domain 17##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	0.0	
chr4	184523980	184524077	reg1037583.p1	3.911	+	TSC_hg19_v1_chr4_+_184427252 AK294310 AB196793	-96737	+	TSC_hg19_v1_chr4_+_184426172 AK314000 NM_001564 BC030128 AB012853 AF053537 AB464592 AJ006851 CU688818	-97781	+	TSC_hg19_v1_chr4_-_184425612 BC038563	-98390	-	CU688324 BC107432 TSC_hg19_v1_chr4_-_184580305 AK021702 AK293274 AK315515 BC017472 BC067752 NM_152682	56214	-	NM_021942 NM_199053 TSC_hg19_v1_chr4_+_184580445 AL833571 AK096345 BX648499 BX647127 BX538044 BC040530 BC051724	56421	+	TSC_hg19_v1_chr4_+_184580539 BC139745	56483	+	AK294310|ING2|3622|inhibitor of growth family, member 2##AB196793|ING2|3622|inhibitor of growth family, member 2##AK314000|ING2|3622|inhibitor of growth family, member 2##NM_001564|ING2|3622|inhibitor of growth family, member 2##BC030128|ING2|3622|inhibitor of growth family, member 2##AB012853|ING2|3622|inhibitor of growth family, member 2##AF053537|ING2|3622|inhibitor of growth family, member 2##AJ006851|ING2|3622|inhibitor of growth family, member 2##BC038563|LOC389247|389247|uncharacterized LOC389247##BC107432|RWDD4|201965|RWD domain containing 4##AK021702|RWDD4|201965|RWD domain containing 4##AK293274|RWDD4|201965|RWD domain containing 4##AK315515|RWDD4|201965|RWD domain containing 4##BC017472|RWDD4|201965|RWD domain containing 4##BC067752|RWDD4|201965|RWD domain containing 4##NM_152682|RWDD4|201965|RWD domain containing 4##NM_021942|C4orf41|60684|chromosome 4 open reading frame 41##NM_199053|C4orf41|60684|chromosome 4 open reading frame 41##AL833571|C4orf41|60684|chromosome 4 open reading frame 41##AK096345|C4orf41|60684|chromosome 4 open reading frame 41##BX648499|C4orf41|60684|chromosome 4 open reading frame 41##BX647127|C4orf41|60684|chromosome 4 open reading frame 41##BX538044|C4orf41|60684|chromosome 4 open reading frame 41##BC040530|C4orf41|60684|chromosome 4 open reading frame 41##BC051724|C4orf41|60684|chromosome 4 open reading frame 41##BC139745|C4orf41|60684|chromosome 4 open reading frame 41	0.712023	CTCF.p2:-1:0.712
chr7	129990296	129990417	reg1027048.p2	3.911	+	NM_001127441 NM_001127442 NM_080385 AK093288 AK315256 AX748034 BC039362 AY155230 BC053681 BC042996 AK131191 AY155229	-5692	+	AK290993 NM_001163446 NM_016352 BC052289 AK310933 AK298553 AK298550 AK299023 AY358699 AF095719 AB590729 CU690898 HQ448429	-57360	+	BC007009 NM_001869 BC014571 BC015140 AK293378 U19977 DQ893811 CU675491 BT007403	-83642	+	NM_001868 AK131054 AK291493 AK293366 BC005279 X67318 CU675077 DQ890565 DQ893728 BT007313	29969	+	BC056162 AK314676 TSC_hg19_v1_chr7_-_130080886 BC018789 AK026098 AJ278890 NM_018718 AK298618 AK311382 AF429308 AF429309	90521	-	TSC_hg19_v1_chr7_+_130126173 AK098397 NM_177524 CR627364 BC090049	135760	+	NM_001127441|CPA5|93979|carboxypeptidase A5##NM_001127442|CPA5|93979|carboxypeptidase A5##NM_080385|CPA5|93979|carboxypeptidase A5##AK093288|CPA5|93979|carboxypeptidase A5##AK315256|CPA5|93979|carboxypeptidase A5##BC039362|CPA5|93979|carboxypeptidase A5##AY155230|CPA5|93979|carboxypeptidase A5##BC053681|CPA5|93979|carboxypeptidase A5##BC042996|CPA5|93979|carboxypeptidase A5##AK131191|CPA5|93979|carboxypeptidase A5##AY155229|CPA5|93979|carboxypeptidase A5##AK290993|CPA4|51200|carboxypeptidase A4##NM_001163446|CPA4|51200|carboxypeptidase A4##NM_016352|CPA4|51200|carboxypeptidase A4##BC052289|CPA4|51200|carboxypeptidase A4##AK310933|CPA4|51200|carboxypeptidase A4##AK298553|CPA4|51200|carboxypeptidase A4##AK298550|CPA4|51200|carboxypeptidase A4##AK299023|CPA4|51200|carboxypeptidase A4##AY358699|CPA4|51200|carboxypeptidase A4##AF095719|CPA4|51200|carboxypeptidase A4##HQ448429|CPA4|51200|carboxypeptidase A4##BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)##AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)##U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)##DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)##BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001868|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK131054|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK291493|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK293366|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC005279|CPA1|1357|carboxypeptidase A1 (pancreatic)##X67318|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ890565|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ893728|CPA1|1357|carboxypeptidase A1 (pancreatic)##BT007313|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC056162|CEP41|95681|centrosomal protein 41kDa##AK314676|CEP41|95681|centrosomal protein 41kDa##BC018789|CEP41|95681|centrosomal protein 41kDa##AK026098|CEP41|95681|centrosomal protein 41kDa##AJ278890|CEP41|95681|centrosomal protein 41kDa##NM_018718|CEP41|95681|centrosomal protein 41kDa##AK298618|CEP41|95681|centrosomal protein 41kDa##AK311382|CEP41|95681|centrosomal protein 41kDa##AF429308|CEP41|95681|centrosomal protein 41kDa##AF429309|CEP41|95681|centrosomal protein 41kDa##AK098397|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_177524|MEST|4232|mesoderm specific transcript homolog (mouse)##CR627364|MEST|4232|mesoderm specific transcript homolog (mouse)##BC090049|MEST|4232|mesoderm specific transcript homolog (mouse)	0.0	
chr8	128579405	128579515	reg1036667.p1	3.911	+	DQ486513 NM_001159542	-151604	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-1008736	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-1008905	-	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	168865	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	169030	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	227323	+	DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)	0.0	
chr1	181399662	181399754	reg1031285.p2	3.910	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-341843	+	NM_016545	-342071	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-396558	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	52992	+	BC137223 BC137224 AK128654 NM_001009992	631089	-	TSC_hg19_v1_chr1_-_182354649 AK301600	954974	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.0	
chr1	206899912	206900092	reg1006548.p3	3.910	+	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-41531	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-90892	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	-91158	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	45877	-	AY040367 NM_153758 AB463800	72224	+	AF453946 NM_013371	102219	+	BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19	0.0	
chr12	105047664	105047778	reg1031788.p1	3.910	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-196634	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-196913	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-196950	+	TSC_hg19_v1_chr12_+_105153261 AF131762	105556	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	274542	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	332369	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.04946	
chr12	108776347	108776443	reg1031939.p2	3.910	+	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	-43311	-	NM_001142345	-61957	-	BC110330 AB018332 NM_014653	-252908	+	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	132687	+	AB385287 D63879 TSC_hg19_v1_chr12_-_108954936 BC103706 BC093784 BC111983 BC143253 BC004547 BC024279 AB020880 AF387506 BC032601	178539	-	TSC_hg19_v1_chr12_-_108954945 AK225174 AK304834	178551	-	U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing##D63879|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC103706|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC093784|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC111983|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC143253|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC004547|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC024279|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AB020880|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AF387506|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC032601|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK225174|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK304834|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3	0.0	
chr17	32490862	32490967	reg1034870.p2	3.910	+	EU446513 U50352 BC075042 BC075043 U53212 AK313043 NM_001094 U57352	-7227	-	AL834182 NM_183377	-870909	-	AF216311 NM_173847 BC100886 BC100887	-1172012	+	NM_002982 M24545 AK311308 AK311960 BC009716 S71513 X14768 M28226 S69738 DQ893725 EU176175 AB463485 BT007329	91417	+	NM_006273 X71087 BC092436 BC070240 BC112258 BC112260 AB587424 HQ258695	106359	+	NM_002986 BC017850 Z69291 Z75668 U46573 Z75669 DQ891969 DQ895158 AB463482 CR457421	121842	+	EU446513|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U50352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075042|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##BC075043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U53212|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AK313043|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_001094|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##U57352|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AL834182|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##NM_183377|ACCN1|40|amiloride-sensitive cation channel 1, neuronal##AF216311|SPACA3|124912|sperm acrosome associated 3##NM_173847|SPACA3|124912|sperm acrosome associated 3##BC100886|SPACA3|124912|sperm acrosome associated 3##BC100887|SPACA3|124912|sperm acrosome associated 3##NM_002982|CCL2|6347|chemokine (C-C motif) ligand 2##M24545|CCL2|6347|chemokine (C-C motif) ligand 2##AK311960|CCL2|6347|chemokine (C-C motif) ligand 2##BC009716|CCL2|6347|chemokine (C-C motif) ligand 2##S71513|CCL2|6347|chemokine (C-C motif) ligand 2##X14768|CCL2|6347|chemokine (C-C motif) ligand 2##M28226|CCL2|6347|chemokine (C-C motif) ligand 2##S69738|CCL2|6347|chemokine (C-C motif) ligand 2##DQ893725|CCL2|6347|chemokine (C-C motif) ligand 2##EU176175|CCL2|6347|chemokine (C-C motif) ligand 2##BT007329|CCL2|6347|chemokine (C-C motif) ligand 2##NM_006273|CCL7|6354|chemokine (C-C motif) ligand 7##X71087|CCL7|6354|chemokine (C-C motif) ligand 7##BC092436|CCL7|6354|chemokine (C-C motif) ligand 7##BC070240|CCL7|6354|chemokine (C-C motif) ligand 7##BC112258|CCL7|6354|chemokine (C-C motif) ligand 7##BC112260|CCL7|6354|chemokine (C-C motif) ligand 7##HQ258695|CCL7|6354|chemokine (C-C motif) ligand 7##NM_002986|CCL11|6356|chemokine (C-C motif) ligand 11##BC017850|CCL11|6356|chemokine (C-C motif) ligand 11##Z69291|CCL11|6356|chemokine (C-C motif) ligand 11##Z75668|CCL11|6356|chemokine (C-C motif) ligand 11##U46573|CCL11|6356|chemokine (C-C motif) ligand 11##Z75669|CCL11|6356|chemokine (C-C motif) ligand 11##DQ891969|CCL11|6356|chemokine (C-C motif) ligand 11##DQ895158|CCL11|6356|chemokine (C-C motif) ligand 11##CR457421|CCL11|6356|chemokine (C-C motif) ligand 11	0.197339	
chr17	38082798	38082870	reg1035336.p1	3.910	+	BC054042 BC050710 AF151043 BC000638 BC018837 TSC_hg19_v1_chr17_-_38078103	-4828	-	AK000409 AK296607 NM_001042471 NM_001165958 NM_001165959	-7962	-	AF119884 NM_018530	-9042	-	TSC_hg19_v1_chr17_-_38083855 AF373101 BC071833 AX775843 AK075212 BC017087 AF395708 AF373102 AK074811 NM_139280	998	-	NM_001195545	14892	+	AK096439 NM_178171 BC109197	36410	+	BC054042|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC050710|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF151043|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC000638|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC018837|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK000409|GSDMB|55876|gasdermin B##AK296607|GSDMB|55876|gasdermin B##NM_001042471|GSDMB|55876|gasdermin B##NM_001165958|GSDMB|55876|gasdermin B##NM_001165959|GSDMB|55876|gasdermin B##AF119884|GSDMB|55876|gasdermin B##NM_018530|GSDMB|55876|gasdermin B##AF373101|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC071833|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AX775843|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK075212|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC017087|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF395708|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF373102|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK074811|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##NM_139280|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##NM_001195545|LRRC3C|100505591|leucine rich repeat containing 3C##AK096439|GSDMA|284110|gasdermin A##NM_178171|GSDMA|284110|gasdermin A##BC109197|GSDMA|284110|gasdermin A	0.0	
chr17	65268782	65268941	reg1035229.p1	3.910	+	TSC_hg19_v1_chr17_-_65241313 NM_014877	-27549	-	D29677 AK310217 TSC_hg19_v1_chr17_-_65241302 BC130582 BC144083	-27572	-	NM_000727 L07738 AK313852 BC113486 BC113492 BC069493 HQ258641	-228150	+	CU676364 AB384721 DQ892821 DQ896067 TSC_hg19_v1_chr17_-_65362658 AK222679 BC065826	93787	-	TSC_hg19_v1_chr17_-_65362694 BC019062 AB003103 AK308883 AK307821 AK091198 AX746843 NM_002816 NM_174871	93844	-	TSC_hg19_v1_chr17_+_65373455 BC037261	104548	+	NM_014877|HELZ|9931|helicase with zinc finger##D29677|HELZ|9931|helicase with zinc finger##AK310217|HELZ|9931|helicase with zinc finger##BC130582|HELZ|9931|helicase with zinc finger##BC144083|HELZ|9931|helicase with zinc finger##NM_000727|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##L07738|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##AK313852|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113486|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC113492|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##BC069493|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##HQ258641|CACNG1|786|calcium channel, voltage-dependent, gamma subunit 1##DQ892821|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##DQ896067|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK222679|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##BC065826|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##BC019062|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AB003103|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK308883|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK307821|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK091198|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##NM_002816|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##NM_174871|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1	0.0	
chr3	186228286	186228466	reg1027644.p1	3.910	+	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	-148442	-	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	-401520	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	-402030	-	CU686840 AF161703 BC069478 AK314172 NM_017541	33764	-	TSC_hg19_v1_chr3_-_186285118 AK001422 BC025748	56732	-	NM_018138 TSC_hg19_v1_chr3_-_186285140	56765	-	BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa##BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##AF161703|CRYGS|1427|crystallin, gamma S##BC069478|CRYGS|1427|crystallin, gamma S##AK314172|CRYGS|1427|crystallin, gamma S##NM_017541|CRYGS|1427|crystallin, gamma S##AK001422|TBCCD1|55171|TBCC domain containing 1##BC025748|TBCCD1|55171|TBCC domain containing 1##NM_018138|TBCCD1|55171|TBCC domain containing 1	0.254726	CTCF.p2:60:0.255
chr5	154325576	154325747	reg1014401.p2	3.910	+	TSC_hg19_v1_chr5_+_154320654 NM_001014990 NM_014180 AK000601 AK302784 CR933679 BC012565 AF161507 CU680362	-5012	+	TSC_hg19_v1_chr5_-_154317760 AB385260 AY063750 AK022748 BC113614 BC143724 BC036894 BC040931 AK074066 AK315101 NM_001252156 NM_015465	-7945	-	TSC_hg19_v1_chr5_+_154238213 AK297381 BC017366	-87419	+	NM_001099293 AK302388	67625	+	BX537948 NM_000337 NM_001128209 NM_172244	1428099	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	1428512	+	NM_001014990|MRPL22|29093|mitochondrial ribosomal protein L22##NM_014180|MRPL22|29093|mitochondrial ribosomal protein L22##AK000601|MRPL22|29093|mitochondrial ribosomal protein L22##AK302784|MRPL22|29093|mitochondrial ribosomal protein L22##CR933679|MRPL22|29093|mitochondrial ribosomal protein L22##BC012565|MRPL22|29093|mitochondrial ribosomal protein L22##AF161507|MRPL22|29093|mitochondrial ribosomal protein L22##AY063750|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK022748|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC113614|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC143724|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC036894|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC040931|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK074066|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK315101|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_001252156|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_015465|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK297381|CNOT8|9337|CCR4-NOT transcription complex, subunit 8##BC017366|CNOT8|9337|CCR4-NOT transcription complex, subunit 8##NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)	0.0	
chrX	30636666	30636776	reg1042689.p1	3.910	+	TSC_hg19_v1_chrX_-_30595884 AK021639 BC020611 NM_025159	-40764	-	HQ692832 AB464646 BC011564 NM_000475	-309235	-	NM_177404 BC013772	-371425	+	TSC_hg19_v1_chrX_+_30671493 BC042421 BC071595 NM_000167 NM_001128127 NM_001205019 NM_203391	34773	+	TSC_hg19_v1_chrX_+_30671539 AK313215	34821	+	TSC_hg19_v1_chrX_+_30671612 L13943 AK294938 AK294304 BX647604 AK308238 BC037549 CU688226 DQ891580 DQ894773	34907	+	AK021639|CXorf21|80231|chromosome X open reading frame 21##BC020611|CXorf21|80231|chromosome X open reading frame 21##NM_025159|CXorf21|80231|chromosome X open reading frame 21##HQ692832|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##BC011564|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_000475|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_177404|MAGEB1|4112|melanoma antigen family B, 1##BC013772|MAGEB1|4112|melanoma antigen family B, 1##BC042421|GK|2710|glycerol kinase##BC071595|GK|2710|glycerol kinase##NM_000167|GK|2710|glycerol kinase##NM_001128127|GK|2710|glycerol kinase##NM_001205019|GK|2710|glycerol kinase##NM_203391|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase##L13943|GK|2710|glycerol kinase##AK294938|GK|2710|glycerol kinase##AK294304|GK|2710|glycerol kinase##BX647604|GK|2710|glycerol kinase##AK308238|GK|2710|glycerol kinase##BC037549|GK|2710|glycerol kinase##DQ891580|GK|2710|glycerol kinase##DQ894773|GK|2710|glycerol kinase	0.0	
chr1	167597276	167597456	reg1035091.p1	3.909	+	TSC_hg19_v1_chr1_-_167523043 NM_003851	-74303	-	DQ891131 DQ894310 AB463481 AY359071 BC006786 BC008628 TSC_hg19_v1_chr1_-_167523000 AK130006 AK315497 AK075375 AK095456 AF084523	-74375	-	AB590419 CU693020 DQ893778 EU176191 X55510 X55511 X55512 BC025703 AK128376 AK313946 J04132 AK223325 NM_000734 NM_198053	-109593	-	AF545852 TSC_hg19_v1_chr1_+_167599495 NM_052862 AK130798	2047	+	TSC_hg19_v1_chr1_+_167599557 AL137762 BC101536 BC101562 BC143428	2203	+	TSC_hg19_v1_chr1_+_167691226 NM_001146191 NM_003953 NM_024569 AK297112 AK075334 AK307250 AK291249 AY359019 AF181660 AF478447 BC000984 BC007881 AF095727 AF087020 AF092425 AF095726 AK315546 AB527648 AF239756 BT019542 CR542160 HQ447352	93962	+	NM_003851|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ891131|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ894310|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AY359071|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC006786|CREG1|8804|cellular repressor of E1A-stimulated genes 1##BC008628|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK130006|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK315497|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK075375|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AK095456|CREG1|8804|cellular repressor of E1A-stimulated genes 1##AF084523|CREG1|8804|cellular repressor of E1A-stimulated genes 1##DQ893778|CD247|919|CD247 molecule##EU176191|CD247|919|CD247 molecule##X55510|CD247|919|CD247 molecule##X55511|CD247|919|CD247 molecule##X55512|CD247|919|CD247 molecule##BC025703|CD247|919|CD247 molecule##AK128376|CD247|919|CD247 molecule##AK313946|CD247|919|CD247 molecule##J04132|CD247|919|CD247 molecule##AK223325|CD247|919|CD247 molecule##NM_000734|CD247|919|CD247 molecule##NM_198053|CD247|919|CD247 molecule##AF545852|RCSD1|92241|RCSD domain containing 1##NM_052862|RCSD1|92241|RCSD domain containing 1##AL137762|RCSD1|92241|RCSD domain containing 1##BC101536|RCSD1|92241|RCSD domain containing 1##BC101562|RCSD1|92241|RCSD domain containing 1##BC143428|RCSD1|92241|RCSD domain containing 1##NM_001146191|MPZL1|9019|myelin protein zero-like 1##NM_003953|MPZL1|9019|myelin protein zero-like 1##NM_024569|MPZL1|9019|myelin protein zero-like 1##AK297112|MPZL1|9019|myelin protein zero-like 1##AK075334|MPZL1|9019|myelin protein zero-like 1##AK307250|MPZL1|9019|myelin protein zero-like 1##AK291249|MPZL1|9019|myelin protein zero-like 1##AY359019|MPZL1|9019|myelin protein zero-like 1##AF181660|MPZL1|9019|myelin protein zero-like 1##AF478447|MPZL1|9019|myelin protein zero-like 1##BC000984|MPZL1|9019|myelin protein zero-like 1##BC007881|MPZL1|9019|myelin protein zero-like 1##AF095727|MPZL1|9019|myelin protein zero-like 1##AF087020|MPZL1|9019|myelin protein zero-like 1##AF092425|MPZL1|9019|myelin protein zero-like 1##AF095726|MPZL1|9019|myelin protein zero-like 1##AK315546|MPZL1|9019|myelin protein zero-like 1##AF239756|MPZL1|9019|myelin protein zero-like 1##BT019542|MPZL1|9019|myelin protein zero-like 1##CR542160|MPZL1|9019|myelin protein zero-like 1##HQ447352|MPZL1|9019|myelin protein zero-like 1	0.0	
chr12	778416	778561	reg1031981.p2	3.909	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-5773	-	TSC_hg19_v1_chr12_-_752800 AK298043	-25669	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-26310	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	83668	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	84268	+	BC013629 TSC_hg19_v1_chr12_+_1017145	238594	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr15	30033057	30033174	reg1035809.p2	3.909	+	NM_015307	-170189	-	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	-471086	-	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	-471145	-	AK304758 TSC_hg19_v1_chr15_-_30114336	81227	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	81508	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	652597	-	NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion	0.981644	CTCF.p2:-12:0.982
chr17	78338180	78338297	reg1038235.p1	3.909	+	TSC_hg19_v1_chr17_+_78237445 CU691854	-100804	+	TSC_hg19_v1_chr17_+_78234657 AB537889 BC036891 NM_020914 NM_020954 AL832920 BC040341 AF397204 AF397205	-103553	+	TSC_hg19_v1_chr17_+_78194101 NM_001166347 NM_001166348 NM_001166349 NM_173626 AJ544073 AK027293 AK075248 AK315132 AL833468 BC035900 AF345195	-144060	+	TSC_hg19_v1_chr17_+_78356710 AK023871	18532	+	TSC_hg19_v1_chr17_-_78388896 AK125341	50639	-	TSC_hg19_v1_chr17_+_78388966 AK092539 AK096344 AX747589 NM_001164637 NM_001164638 NM_173627 BC059781	50722	+	AB537889|RNF213|57674|ring finger protein 213##BC036891|RNF213|57674|ring finger protein 213##NM_020914|RNF213|57674|ring finger protein 213##NM_020954|RNF213|57674|ring finger protein 213##AL832920|RNF213|57674|ring finger protein 213##BC040341|RNF213|57674|ring finger protein 213##AF397204|RNF213|57674|ring finger protein 213##AF397205|RNF213|57674|ring finger protein 213##NM_001166347|SLC26A11|284129|solute carrier family 26, member 11##NM_001166348|SLC26A11|284129|solute carrier family 26, member 11##NM_001166349|SLC26A11|284129|solute carrier family 26, member 11##NM_173626|SLC26A11|284129|solute carrier family 26, member 11##AJ544073|SLC26A11|284129|solute carrier family 26, member 11##AK027293|SLC26A11|284129|solute carrier family 26, member 11##AK075248|SLC26A11|284129|solute carrier family 26, member 11##AK315132|SLC26A11|284129|solute carrier family 26, member 11##AL833468|SLC26A11|284129|solute carrier family 26, member 11##BC035900|SLC26A11|284129|solute carrier family 26, member 11##AF345195|SLC26A11|284129|solute carrier family 26, member 11##AK023871|RNF213|57674|ring finger protein 213##AK125341|LOC100294362|100294362|uncharacterized LOC100294362##AK092539|ENDOV|284131|endonuclease V##AK096344|ENDOV|284131|endonuclease V##NM_001164637|ENDOV|284131|endonuclease V##NM_001164638|ENDOV|284131|endonuclease V##NM_173627|ENDOV|284131|endonuclease V##BC059781|ENDOV|284131|endonuclease V	0.477447	CTCF.p2:-14:0.477
chr20	17485914	17486094	reg1008692.p2	3.909	+	TSC_hg19_v1_chr20_+_17207684 BC005815 AK294200 AK312341 J05252 AB528512 DQ892675 DQ895917	-278189	+	BC001905 TSC_hg19_v1_chr20_+_17207673	-278333	+	NM_001201529 NM_002594 TSC_hg19_v1_chr20_+_17207617	-278394	+	AF039655 Y16717 TSC_hg19_v1_chr20_-_17512006 NM_001195	25988	-	AK316247 BC041483 NM_001161705	53538	-	NM_001011546 NM_006870 TSC_hg19_v1_chr20_+_17550756 AK315994 BC009477 AK312645 BX647319 S65738 AK302338	64735	+	BC005815|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK294200|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK312341|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##J05252|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##DQ892675|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##DQ895917|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201529|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AF039655|BFSP1|631|beaded filament structural protein 1, filensin##Y16717|BFSP1|631|beaded filament structural protein 1, filensin##NM_001195|BFSP1|631|beaded filament structural protein 1, filensin##AK316247|BFSP1|631|beaded filament structural protein 1, filensin##BC041483|BFSP1|631|beaded filament structural protein 1, filensin##NM_001161705|BFSP1|631|beaded filament structural protein 1, filensin##NM_001011546|DSTN|11034|destrin (actin depolymerizing factor)##NM_006870|DSTN|11034|destrin (actin depolymerizing factor)##AK315994|DSTN|11034|destrin (actin depolymerizing factor)##BC009477|DSTN|11034|destrin (actin depolymerizing factor)##AK312645|DSTN|11034|destrin (actin depolymerizing factor)##BX647319|DSTN|11034|destrin (actin depolymerizing factor)##S65738|DSTN|11034|destrin (actin depolymerizing factor)##AK302338|DSTN|11034|destrin (actin depolymerizing factor)	0.038999	
chr20	25666407	25666528	reg1032963.p1	3.909	+	BC034569 TSC_hg19_v1_chr20_+_25604757	-61748	+	EU831914 EU832008 TSC_hg19_v1_chr20_-_25604651 BC022552 AK055472 AL833116 NM_152667	-61849	-	TSC_hg19_v1_chr20_-_25566168 AB023197 EU718622 NM_025176 AK309298	-100300	-	TSC_hg19_v1_chr20_-_25677490 AK056184 BC021298 NM_015655 AK291235	10892	-	TSC_hg19_v1_chr20_-_26189755 BC036544	523344	-	TSC_hg19_v1_chr20_+_29611882 BC062724 BC062743 AK307061 BC095491 AK057099	3945458	+	BC034569|ZNF337|26152|zinc finger protein 337##EU831914|NANP|140838|N-acetylneuraminic acid phosphatase##EU832008|NANP|140838|N-acetylneuraminic acid phosphatase##BC022552|NANP|140838|N-acetylneuraminic acid phosphatase##AK055472|NANP|140838|N-acetylneuraminic acid phosphatase##AL833116|NANP|140838|N-acetylneuraminic acid phosphatase##NM_152667|NANP|140838|N-acetylneuraminic acid phosphatase##AB023197|NINL|22981|ninein-like##EU718622|NINL|22981|ninein-like##NM_025176|NINL|22981|ninein-like##AK309298|NINL|22981|ninein-like##AK056184|ZNF337|26152|zinc finger protein 337##BC021298|ZNF337|26152|zinc finger protein 337##NM_015655|ZNF337|26152|zinc finger protein 337##AK291235|ZNF337|26152|zinc finger protein 337##BC036544|LOC284801|284801|uncharacterized LOC284801##BC062724|FRG1B|284802|FSHD region gene 1 family, member B##BC062743|FRG1B|284802|FSHD region gene 1 family, member B##BC095491|FRG1B|284802|FSHD region gene 1 family, member B##AK057099|LOC642236|642236|FSHD region gene 1 pseudogene	0.067486	
chr21	29424052	29424164	reg1034388.p2	3.909	+	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	-1084669	-	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	-1206396	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	-1206637	-	TSC_hg19_v1_chr21_-_30257688 AB590951 BC011554 AK314100 AK225515 AF139682 NM_013240 NM_182749	833555	-	BC007525 AB384515 TSC_hg19_v1_chr21_-_30365185 AF161350 AB018257 BC150284 AB621822 BC029371 BC140790 AK001915 BC031633 NM_015565	941085	-	CU676110 TSC_hg19_v1_chr21_-_30391645 AF212232 BC012546 Y19009 BC017912 AK000056 AL355727 NM_016940 AK223357	967539	-	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##BC007525|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF161350|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AB018257|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC150284|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC029371|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC140790|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AK001915|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC031633|LTN1|26046|listerin E3 ubiquitin protein ligase 1##NM_015565|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF212232|RWDD2B|10069|RWD domain containing 2B##BC012546|RWDD2B|10069|RWD domain containing 2B##Y19009|RWDD2B|10069|RWD domain containing 2B##BC017912|RWDD2B|10069|RWD domain containing 2B##AK000056|RWDD2B|10069|RWD domain containing 2B##AL355727|RWDD2B|10069|RWD domain containing 2B##NM_016940|RWDD2B|10069|RWD domain containing 2B##AK223357|RWDD2B|10069|RWD domain containing 2B	0.071266	
chr6	157254677	157254769	reg1035395.p2	3.909	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-154848	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-155439	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-155498	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	489861	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	490494	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	547816	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	0.990307	CTCF.p2:-6:0.990
chr9	35103129	35103238	reg1034540.p1	3.909	+	TSC_hg19_v1_chr9_-_35103148 AF190167 NM_013442	-33	-	TSC_hg19_v1_chr9_-_35103124 CU677964 DQ895920 DQ892677 BC003025 AK130546 AK308552 BC014990 AF282596 AK027405 AK225114 BC010152 AK307343 BC002442 AK303883 AK223102	-67	-	TSC_hg19_v1_chr9_-_35103065 AF161458	-119	-	TSC_hg19_v1_chr9_-_35111546 AB040972	8369	-	TSC_hg19_v1_chr9_-_35115860 AK022837 AK021622 BC004406 NM_025182 AK307682	12694	-	TSC_hg19_v1_chr9_+_35161986 NM_006377 AB209998 AK296836 AF020202	58819	+	AF190167|STOML2|30968|stomatin (EPB72)-like 2##NM_013442|STOML2|30968|stomatin (EPB72)-like 2##DQ895920|STOML2|30968|stomatin (EPB72)-like 2##DQ892677|STOML2|30968|stomatin (EPB72)-like 2##BC003025|STOML2|30968|stomatin (EPB72)-like 2##AK130546|STOML2|30968|stomatin (EPB72)-like 2##BC014990|STOML2|30968|stomatin (EPB72)-like 2##AF282596|STOML2|30968|stomatin (EPB72)-like 2##AK027405|STOML2|30968|stomatin (EPB72)-like 2##AK225114|STOML2|30968|stomatin (EPB72)-like 2##BC010152|STOML2|30968|stomatin (EPB72)-like 2##AK307343|STOML2|30968|stomatin (EPB72)-like 2##BC002442|STOML2|30968|stomatin (EPB72)-like 2##AK303883|STOML2|30968|stomatin (EPB72)-like 2##AK223102|STOML2|30968|stomatin (EPB72)-like 2##AF161458|STOML2|30968|stomatin (EPB72)-like 2##AB040972|FAM214B|80256|family with sequence similarity 214, member B##AK022837|FAM214B|80256|family with sequence similarity 214, member B##AK021622|FAM214B|80256|family with sequence similarity 214, member B##BC004406|FAM214B|80256|family with sequence similarity 214, member B##NM_025182|FAM214B|80256|family with sequence similarity 214, member B##AK307682|FAM214B|80256|family with sequence similarity 214, member B##NM_006377|UNC13B|10497|unc-13 homolog B (C. elegans)##AB209998|UNC13B|10497|unc-13 homolog B (C. elegans)##AK296836|UNC13B|10497|unc-13 homolog B (C. elegans)##AF020202|UNC13B|10497|unc-13 homolog B (C. elegans)	0.0	
chr11	118065022	118065173	reg1040298.p1	3.908	+	NM_004588 TSC_hg19_v1_chr11_-_118047340	-17755	-	AF007783 BT019487 DQ892426 DQ892634 DQ895640 U87555 AY358945 BC036793 AF049498 AK308834 AK313891 TSC_hg19_v1_chr11_-_118047330	-17860	-	AY149967 AK314531 NM_001142348 NM_174934	-41516	-	AK094399 NM_153206	18976	-	AK090409 AY138965 AY358362 AY093686 AK298722 AK300851 AK301099 AJ515553 NM_001098526	30661	-	TSC_hg19_v1_chr11_-_118123036 HQ258603 AY358626 NM_198275 AK095399 AK289390 AK296951 BC031223 AK304292 AK310966 BC113586 BC143897	57953	-	NM_004588|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AF007783|SCN2B|6327|sodium channel, voltage-gated, type II, beta##BT019487|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ892426|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ892634|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ895640|SCN2B|6327|sodium channel, voltage-gated, type II, beta##U87555|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AY358945|SCN2B|6327|sodium channel, voltage-gated, type II, beta##BC036793|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AF049498|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK308834|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK313891|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AY149967|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##AK314531|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_001142348|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_174934|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK090409|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AY138965|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AY358362|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AY093686|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK298722|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK300851|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK301099|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AJ515553|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##NM_001098526|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##HQ258603|MPZL3|196264|myelin protein zero-like 3##AY358626|MPZL3|196264|myelin protein zero-like 3##NM_198275|MPZL3|196264|myelin protein zero-like 3##AK095399|MPZL3|196264|myelin protein zero-like 3##AK289390|MPZL3|196264|myelin protein zero-like 3##AK296951|MPZL3|196264|myelin protein zero-like 3##BC031223|MPZL3|196264|myelin protein zero-like 3##AK304292|MPZL3|196264|myelin protein zero-like 3##AK310966|MPZL3|196264|myelin protein zero-like 3##BC113586|MPZL3|196264|myelin protein zero-like 3##BC143897|MPZL3|196264|myelin protein zero-like 3	0.0	
chr15	70418155	70418322	reg1030118.p2	3.908	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-27995	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-28011	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-76329	-	TSC_hg19_v1_chr15_-_70878946 BC040579	460706	-	BC016881 AL834243 NM_001008224 AK055435	576389	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	637604	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.0	
chr20	35089366	35089546	reg1037560.p2	3.908	+	NM_014902	-94013	+	TSC_hg19_v1_chr20_+_34894262 AB023181	-195201	+	TSC_hg19_v1_chr20_+_34824402 BC001751 BC019311 NM_015511	-265033	+	TSC_hg19_v1_chr20_+_35089870 NM_001042486 AK001681	413	+	NM_183006 BC153874 TSC_hg19_v1_chr20_+_35090197 BC108706	719	+	TSC_hg19_v1_chr20_+_35169892 NM_006097 NM_181526	80430	+	NM_014902|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##AB023181|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC001751|C20orf4|25980|chromosome 20 open reading frame 4##BC019311|C20orf4|25980|chromosome 20 open reading frame 4##NM_015511|C20orf4|25980|chromosome 20 open reading frame 4##NM_001042486|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##AK001681|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_183006|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC153874|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC108706|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_006097|MYL9|10398|myosin, light chain 9, regulatory##NM_181526|MYL9|10398|myosin, light chain 9, regulatory	0.0	
chr2	174943151	174943266	reg1038425.p1	3.908	+	AY441957 NM_001172712 NM_003111	-112779	-	BC126414 BC143928 AK304199 TSC_hg19_v1_chr2_-_174830067	-113199	-	TSC_hg19_v1_chr2_-_174829232 AJ310752 AJ430844 AY441958 AB528284	-114014	-	BC068447 TSC_hg19_v1_chr2_-_175113235 BC013925 BC091522 DQ250006	170009	-	TSC_hg19_v1_chr2_-_175113245 AK296339 BC029376 AF134478	170037	-	TSC_hg19_v1_chr2_-_175113261 AK225112 AF078868	170062	-	AY441957|SP3|6670|Sp3 transcription factor##NM_001172712|SP3|6670|Sp3 transcription factor##NM_003111|SP3|6670|Sp3 transcription factor##BC126414|SP3|6670|Sp3 transcription factor##BC143928|SP3|6670|Sp3 transcription factor##AK304199|SP3|6670|Sp3 transcription factor##AJ310752|SP3|6670|Sp3 transcription factor##AY441958|SP3|6670|Sp3 transcription factor##BC068447|OLA1|29789|Obg-like ATPase 1##BC013925|OLA1|29789|Obg-like ATPase 1##BC091522|OLA1|29789|Obg-like ATPase 1##DQ250006|OLA1|29789|Obg-like ATPase 1##AK296339|OLA1|29789|Obg-like ATPase 1##BC029376|OLA1|29789|Obg-like ATPase 1##AF134478|OLA1|29789|Obg-like ATPase 1##AK225112|OLA1|29789|Obg-like ATPase 1##AF078868|OLA1|29789|Obg-like ATPase 1	0.480857	CTCF.p2:5:0.481
chr2	43832408	43832498	reg1032277.p2	3.908	+	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	-9305	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	-378711	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-378723	-	TSC_hg19_v1_chr2_+_43864411 BC063310	31960	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	31986	+	NM_001101330	71007	-	AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_001101330|LOC728819|728819|hCG1645220	0.083555	
chr4	143204156	143204280	reg1031151.p1	3.908	+	AK290619 NM_000585 NM_172175 BC018149 U14407	-646452	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-1062132	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-1062163	+	NM_001101669 NM_003866	563385	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	901846	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	901907	+	AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38	0.577568	CTCF.p2:-13:0.578
chr4	26133439	26133620	reg1037251.p1	3.908	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-217665	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-268975	-	NM_001177999 AK314514	-475439	+	L07875 BC020780 NM_005349 NM_203283	187790	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	188780	+	TSC_hg19_v1_chr4_+_26322635 AK302230	189107	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.0	
chr5	76856855	76857019	reg1002222.p2	3.908	+	TSC_hg19_v1_chr5_-_76788333 AK001766 BC001807 NM_018268	-68622	-	AK296423 AK300058 TSC_hg19_v1_chr5_-_76788142 AK021855	-68792	-	TSC_hg19_v1_chr5_-_76788048 AK293316 AK295249 CU691838 AK304329 AK023977 AF115511 BC040241	-68871	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	77492	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	77577	-	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	215195	-	AK001766|WDR41|55255|WD repeat domain 41##BC001807|WDR41|55255|WD repeat domain 41##NM_018268|WDR41|55255|WD repeat domain 41##AK296423|WDR41|55255|WD repeat domain 41##AK300058|WDR41|55255|WD repeat domain 41##AK021855|WDR41|55255|WD repeat domain 41##AK293316|WDR41|55255|WD repeat domain 41##AK295249|WDR41|55255|WD repeat domain 41##AK304329|WDR41|55255|WD repeat domain 41##AK023977|WDR41|55255|WD repeat domain 41##AF115511|WDR41|55255|WD repeat domain 41##BC040241|WDR41|55255|WD repeat domain 41##EU446696|OTP|23440|orthopedia homeobox##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A	0.0	
chr6	167527833	167528013	reg1025828.p2	3.908	+	NM_004367	-2629	+	TSC_hg19_v1_chr6_+_167412884 NM_007045 NM_194429 Y18046 AK294950 AK289846 BX647686 AK312791 BC011902 AB590215 CU680104 DQ893037 DQ896278 AJ420472	-115070	+	AK315467 TSC_hg19_v1_chr6_-_167370038 BC036282 NM_003730	-157866	-	NM_031409 U68031 U68030	8326	+	BC095537 NM_005299	43393	-	NM_001145121	56157	+	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6##NM_007045|FGFR1OP|11116|FGFR1 oncogene partner##NM_194429|FGFR1OP|11116|FGFR1 oncogene partner##Y18046|FGFR1OP|11116|FGFR1 oncogene partner##AK294950|FGFR1OP|11116|FGFR1 oncogene partner##AK289846|FGFR1OP|11116|FGFR1 oncogene partner##AK312791|FGFR1OP|11116|FGFR1 oncogene partner##BC011902|FGFR1OP|11116|FGFR1 oncogene partner##DQ893037|FGFR1OP|11116|FGFR1 oncogene partner##DQ896278|FGFR1OP|11116|FGFR1 oncogene partner##AJ420472|FGFR1OP|11116|FGFR1 oncogene partner##AK315467|RNASET2|8635|ribonuclease T2##BC036282|RNASET2|8635|ribonuclease T2##NM_003730|RNASET2|8635|ribonuclease T2##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31##NM_001145121|TCP10L2|401285|t-complex 10-like 2 (mouse)	0.013684	
chr7	2691137	2691247	reg1035648.p2	3.908	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-19489	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	-19589	+	AK092404 AX747526 TSC_hg19_v1_chr7_+_2598712 BC061518 AL136792 AK293372	-92445	+	AK289723 AB075830 BC146753 NM_133463	27966	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	192616	-	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	392270	-	BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##AK092404|IQCE|23288|IQ motif containing E##BC061518|IQCE|23288|IQ motif containing E##AL136792|IQCE|23288|IQ motif containing E##AK293372|IQCE|23288|IQ motif containing E##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11	0.019504	
chr7	38409587	38409688	reg1029939.p2	3.908	+	TSC_hg19_v1_chr7_-_38389583 BC035592	-20048	-	Y00482 TSC_hg19_v1_chr7_-_38389512	-20161	-	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	-34433	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	261325	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	261440	-	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	539156	-	BC035592|TRGV5|6978|T cell receptor gamma variable 5##BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)	0.960025	CTCF.p2:6:0.960
chr7	98384685	98384865	reg1009888.p2	3.908	+	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	-138039	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-354342	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-354481	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	82755	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	82852	-	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	82901	-	NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130	0.078434	
chr8	121714413	121714546	reg1034104.p1	3.908	+	TSC_hg19_v1_chr8_+_121457658 AK022122 AK300762 BC013136 NM_022045 EU176294 EU176618	-256803	+	BC021744 NM_014078	-256844	-	TSC_hg19_v1_chr8_-_121457391 AK311924	-257086	-	TSC_hg19_v1_chr8_+_121823539 AK302130	109062	+	TSC_hg19_v1_chr8_-_121823718 AF028828	109282	-	TSC_hg19_v1_chr8_-_121824090 AB590740	109584	-	AK022122|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##AK300762|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##BC013136|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##NM_022045|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##EU176294|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##EU176618|MTBP|27085|Mdm2, transformed 3T3 cell double minute 2, p53 binding protein (mouse) binding protein, 104kDa##BC021744|MRPL13|28998|mitochondrial ribosomal protein L13##NM_014078|MRPL13|28998|mitochondrial ribosomal protein L13##AK311924|MRPL13|28998|mitochondrial ribosomal protein L13##AF028828|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)	0.0	
chr8	50226056	50226137	reg1037865.p1	3.908	+	NM_001007176 BC017981 AJ276240	-241187	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-392186	-	AK021829 BC025676 BC029586 AK316037 AK299659 AK307101 NM_001142857 NM_024593	-578303	-	AJ003030 NM_018967	598500	+	EU170240 AY877349 NM_144651	2495857	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	2585506	-	NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##AK021829|EFCAB1|79645|EF-hand calcium binding domain 1##BC025676|EFCAB1|79645|EF-hand calcium binding domain 1##BC029586|EFCAB1|79645|EF-hand calcium binding domain 1##AK316037|EFCAB1|79645|EF-hand calcium binding domain 1##AK299659|EFCAB1|79645|EF-hand calcium binding domain 1##AK307101|EFCAB1|79645|EF-hand calcium binding domain 1##NM_001142857|EFCAB1|79645|EF-hand calcium binding domain 1##NM_024593|EFCAB1|79645|EF-hand calcium binding domain 1##AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.0	
chr11	35743721	35743836	reg1036209.p2	3.907	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-59105	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-59328	+	TSC_hg19_v1_chr11_+_35684404 BC013166 NM_017583	-59405	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	221833	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	567175	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	567208	-	DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##BC013166|TRIM44|54765|tripartite motif containing 44##NM_017583|TRIM44|54765|tripartite motif containing 44##BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9	0.0	
chr11	62473705	62473771	reg1026783.p2	3.907	+	TSC_hg19_v1_chr11_-_62473729 BC041640 BC012140 BC004911 AK075317 AK225029 AK027524 NM_001130702 NM_032667	-42	-	TSC_hg19_v1_chr11_-_62472904 CU678804 CU680238 CU692014	-796	-	NM_203422	-16368	-	CU679517 DQ893483 EU176769 TSC_hg19_v1_chr11_-_62474716 BC093048	958	-	TSC_hg19_v1_chr11_-_62474818 AF052149	1085	-	AK223606 TSC_hg19_v1_chr11_-_62474893	1151	-	BC041640|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##BC012140|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##BC004911|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK075317|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK225029|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK027524|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##NM_001130702|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##NM_032667|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##NM_203422|LRRN4CL|221091|LRRN4 C-terminal like##DQ893483|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##EU176769|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##BC093048|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AF052149|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)##AK223606|BSCL2|26580|Berardinelli-Seip congenital lipodystrophy 2 (seipin)	0.0	
chr12	90267546	90267645	reg1033874.p1	3.907	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-164050	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-164908	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-217744	-	BC026075 BC024183 BC027600 BC034491 NM_152638	1081356	-	U59111 TSC_hg19_v1_chr12_-_91398750	1131152	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	1131184	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.0	
chr16	11679955	11680066	reg1038861.p1	3.907	+	TSC_hg19_v1_chr16_+_11439315 BC013040	-240692	+	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	-240716	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-304868	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	177	-	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	779	-	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	82288	+	BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin	0.064272	
chr17	36008608	36008758	reg1034864.p1	3.907	+	TSC_hg19_v1_chr17_-_36003470 AF077033 AK001652 AK093661 AX748248 BC041785 NM_007010	-5206	-	TSC_hg19_v1_chr17_-_36003446 BC006489 AB208938 CU692030	-5242	-	TSC_hg19_v1_chr17_-_35969418 AB462949 BC117313 BC143452 BC143476 BC143478 BC084536 BC090930 AF169548 AK302821 NM_001163544 NM_001163545 NM_001163546 NM_001163547 NM_007247 NM_080550 NM_198882	-39233	-	AB528419 BT007126 CR536572 DQ891528 EU176615 TSC_hg19_v1_chr17_-_36104898	96203	-	TSC_hg19_v1_chr17_-_36105051 HM116553 HM116554 HM116555 HM116556 AK290131 AK296633 AK298393 BC017714 X58840 NM_000458 NM_001165923	96368	-	NM_001123391 NM_032258 AK313329 AK302064 BC078140 BC071680 AK301823 AL136860 BC047739	275310	+	AF077033|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK001652|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK093661|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC041785|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_007010|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC006489|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AB208938|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC117313|SYNRG|11276|synergin, gamma##BC143452|SYNRG|11276|synergin, gamma##BC143476|SYNRG|11276|synergin, gamma##BC143478|SYNRG|11276|synergin, gamma##BC084536|SYNRG|11276|synergin, gamma##BC090930|SYNRG|11276|synergin, gamma##AF169548|SYNRG|11276|synergin, gamma##AK302821|SYNRG|11276|synergin, gamma##NM_001163544|SYNRG|11276|synergin, gamma##NM_001163545|SYNRG|11276|synergin, gamma##NM_001163546|SYNRG|11276|synergin, gamma##NM_001163547|SYNRG|11276|synergin, gamma##NM_007247|SYNRG|11276|synergin, gamma##NM_080550|SYNRG|11276|synergin, gamma##NM_198882|SYNRG|11276|synergin, gamma##BT007126|HNF1B|6928|HNF1 homeobox B##CR536572|HNF1B|6928|HNF1 homeobox B##DQ891528|HNF1B|6928|HNF1 homeobox B##EU176615|HNF1B|6928|HNF1 homeobox B##HM116553|HNF1B|6928|HNF1 homeobox B##HM116554|HNF1B|6928|HNF1 homeobox B##HM116555|HNF1B|6928|HNF1 homeobox B##HM116556|HNF1B|6928|HNF1 homeobox B##AK290131|HNF1B|6928|HNF1 homeobox B##AK296633|HNF1B|6928|HNF1 homeobox B##AK298393|HNF1B|6928|HNF1 homeobox B##BC017714|HNF1B|6928|HNF1 homeobox B##X58840|HNF1B|6928|HNF1 homeobox B##NM_000458|HNF1B|6928|HNF1 homeobox B##NM_001165923|HNF1B|6928|HNF1 homeobox B##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##AK313329|TBC1D3|729873|TBC1 domain family, member 3##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3	0.0	
chr18	57590555	57590639	reg1035080.p1	3.907	+	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-23368	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-225947	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	-226006	-	AK314130 NM_005912	449403	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1567177	+	AK096495 NM_173557	1969706	-	NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152	0.0	
chr19	57752035	57752157	reg1038201.p1	3.907	+	TSC_hg19_v1_chr19_+_57752051 NM_001023563 NM_001145078	-39	+	AK297977 TSC_hg19_v1_chr19_+_57751999	-108	+	AY661554 NM_001015879 NM_003160 AK301886 NM_001015878 AF054621	-9693	+	TSC_hg19_v1_chr19_+_57791351 AK298106	39260	+	TSC_hg19_v1_chr19_+_57791852 AK292144 NM_006635 AK074582 AY329492	39791	+	TSC_hg19_v1_chr19_+_57831849 NM_213598 AK131547	79818	+	NM_001023563|ZNF805|390980|zinc finger protein 805##NM_001145078|ZNF805|390980|zinc finger protein 805##AK297977|ZNF805|390980|zinc finger protein 805##AY661554|AURKC|6795|aurora kinase C##NM_001015879|AURKC|6795|aurora kinase C##NM_003160|AURKC|6795|aurora kinase C##NM_001015878|AURKC|6795|aurora kinase C##AF054621|AURKC|6795|aurora kinase C##AK298106|ZNF460|10794|zinc finger protein 460##AK292144|ZNF460|10794|zinc finger protein 460##NM_006635|ZNF460|10794|zinc finger protein 460##AK074582|ZNF460|10794|zinc finger protein 460##AY329492|ZNF460|10794|zinc finger protein 460##NM_213598|ZNF543|125919|zinc finger protein 543##AK131547|ZNF543|125919|zinc finger protein 543	0.0	
chr20	36724199	36724364	reg1037590.p1	3.907	+	TSC_hg19_v1_chr20_+_36662228 AB463518 CU689672	-62004	+	TSC_hg19_v1_chr20_+_36662168 BC033629 AK312468 BC001696	-62114	+	TSC_hg19_v1_chr20_+_36661917 NM_021215 DQ372938	-62320	+	TSC_hg19_v1_chr20_-_36758362 M98479	34110	-	TSC_hg19_v1_chr20_-_36793673 AK291714 AK058031 AK295775 AK300292 AK314618 BC003551 NM_004613 NM_198951	69398	-	AK096202 NM_001029864	164892	-	BC033629|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##AK312468|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##BC001696|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##NM_021215|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##DQ372938|RPRD1B|58490|regulation of nuclear pre-mRNA domain containing 1B##M98479|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK291714|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK058031|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK295775|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK300292|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK314618|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC003551|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_004613|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_198951|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755	0.0	
chr20	37218906	37219029	reg1036401.p1	3.907	+	BC029594 NM_001018082 BC119704 BC119705	-9127	+	TSC_hg19_v1_chr20_+_37101489 AB033045 BC047482 NM_020336 AK304242 CR936800	-117459	+	TSC_hg19_v1_chr20_+_37075314 AK055434 AK290212 AF454939 AF497716 BC021083 BC040237	-143640	+	TSC_hg19_v1_chr20_+_37230452 NM_001164431	11546	+	NM_080552 TSC_hg19_v1_chr20_+_37353115	134145	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	134192	+	BC029594|ADIG|149685|adipogenin##NM_001018082|ADIG|149685|adipogenin##BC119704|ADIG|149685|adipogenin##BC119705|ADIG|149685|adipogenin##AB033045|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##BC047482|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##NM_020336|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##AK304242|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##CR936800|RALGAPB|57148|Ral GTPase activating protein, beta subunit (non-catalytic)##AK055434|SNHG11|128439|small nucleolar RNA host gene 11 (non-protein coding)##BC040237|SNHG11|128439|small nucleolar RNA host gene 11 (non-protein coding)##NM_001164431|ARHGAP40|343578|Rho GTPase activating protein 40##NM_080552|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1	0.0	
chr5	159886193	159886374	reg1029310.p1	3.907	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-37380	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-37429	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-40178	-	AK025130 TSC_hg19_v1_chr5_-_160112393	226056	-	AB018258 AK295081 AK090832 AX746642 NM_025153	392848	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	1088843	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.0	
chr9	114393298	114393479	reg1026223.p1	3.907	+	AK309866 AK298379 AK289597 NM_001146108 NM_001146109	-31271	-	D49387 AK091948 AK309450 TSC_hg19_v1_chr9_-_114361928	-31471	-	TSC_hg19_v1_chr9_-_114361678 BC035228 NM_012212	-31698	-	TSC_hg19_v1_chr9_+_114393648 NM_001015882 NM_004125 AK095452 BC048318 AF447177 BC015391 BT007068 DQ891510 DQ894701	227	+	TSC_hg19_v1_chr9_+_114423856 NM_001017998 NM_001198664	30474	+	BC107574 TSC_hg19_v1_chr9_+_114423894 BC010384 BC016319 U31383 BC072671 BC015206 AB463708 AF493877	30513	+	AK309866|PTGR1|22949|prostaglandin reductase 1##AK298379|PTGR1|22949|prostaglandin reductase 1##AK289597|PTGR1|22949|prostaglandin reductase 1##NM_001146108|PTGR1|22949|prostaglandin reductase 1##NM_001146109|PTGR1|22949|prostaglandin reductase 1##D49387|PTGR1|22949|prostaglandin reductase 1##AK091948|PTGR1|22949|prostaglandin reductase 1##AK309450|PTGR1|22949|prostaglandin reductase 1##BC035228|PTGR1|22949|prostaglandin reductase 1##NM_012212|PTGR1|22949|prostaglandin reductase 1##NM_001015882|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##NM_004125|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##AK095452|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##BC048318|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##AF447177|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##BC015391|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##BT007068|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##DQ891510|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##DQ894701|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##NM_001017998|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##NM_001198664|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC107574|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC010384|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC016319|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##U31383|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC072671|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC015206|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##AF493877|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10	0.0	
chr9	131664791	131664971	reg1033886.p2	3.907	+	AK289842 NM_001127244	-20101	+	TSC_hg19_v1_chr9_+_131644447 AB037858 BC051322	-20429	+	TSC_hg19_v1_chr9_+_131644390 NM_001127245 NM_019594	-20498	+	AK095000 NM_001100876 NM_174933	18292	+	BC009373 TSC_hg19_v1_chr9_+_131683689	18807	+	NM_001100877 BC051300 BC053853 CU691038	19700	+	AK289842|LRRC8A|56262|leucine rich repeat containing 8 family, member A##NM_001127244|LRRC8A|56262|leucine rich repeat containing 8 family, member A##AB037858|LRRC8A|56262|leucine rich repeat containing 8 family, member A##BC051322|LRRC8A|56262|leucine rich repeat containing 8 family, member A##NM_001127245|LRRC8A|56262|leucine rich repeat containing 8 family, member A##NM_019594|LRRC8A|56262|leucine rich repeat containing 8 family, member A##AK095000|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##NM_001100876|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##NM_174933|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##BC009373|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##NM_001100877|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##BC051300|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1##BC053853|PHYHD1|254295|phytanoyl-CoA dioxygenase domain containing 1	0.131054	
chr10	44460914	44461094	reg1032927.p1	3.906	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-316698	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-316799	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-359107	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	419495	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	945714	+	AK056518 TSC_hg19_v1_chr10_-_45455156	994143	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.0	
chr10	91597393	91597574	reg1030909.p2	3.906	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-98716	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-136108	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-192159	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	1019963	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	1020250	-	TSC_hg19_v1_chr10_+_92631241 BC006991	1033774	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.329951	CTCF.p2:17:0.330
chr11	109827796	109827976	reg1037137.p3	3.906	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-534987	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-535043	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-1292072	+	AK095101 TSC_hg19_v1_chr11_+_109963524	135642	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	136244	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	339427	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.0	
chr12	117500816	117500940	reg1036011.p1	3.906	+	TSC_hg19_v1_chr12_+_117348781 BC037296 NM_012174 NM_153348 AK289621 AF176707 BC075823	-152092	+	NM_003806 U76376	-181647	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	-324759	+	DQ894644 TSC_hg19_v1_chr12_-_117537222 AF443207 BC015221 NM_001168325 NM_017899 AK000614	36385	-	AL136899 TSC_hg19_v1_chr12_-_117628277 BC091496 AF174601 AB020682 AK001699 AK314573 BC034045 BC042333 AK308141 NM_015002 NM_033624	127347	-	NM_001204213	241978	-	BC037296|FBXW8|26259|F-box and WD repeat domain containing 8##NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8##NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8##AK289621|FBXW8|26259|F-box and WD repeat domain containing 8##AF176707|FBXW8|26259|F-box and WD repeat domain containing 8##NM_003806|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##U76376|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2##DQ894644|TESC|54997|tescalcin##AF443207|TESC|54997|tescalcin##BC015221|TESC|54997|tescalcin##NM_001168325|TESC|54997|tescalcin##NM_017899|TESC|54997|tescalcin##AK000614|TESC|54997|tescalcin##AL136899|FBXO21|23014|F-box protein 21##BC091496|FBXO21|23014|F-box protein 21##AF174601|FBXO21|23014|F-box protein 21##AB020682|FBXO21|23014|F-box protein 21##AK001699|FBXO21|23014|F-box protein 21##AK314573|FBXO21|23014|F-box protein 21##BC034045|FBXO21|23014|F-box protein 21##BC042333|FBXO21|23014|F-box protein 21##AK308141|FBXO21|23014|F-box protein 21##NM_015002|FBXO21|23014|F-box protein 21##NM_033624|FBXO21|23014|F-box protein 21##NM_001204213|NOS1|4842|nitric oxide synthase 1 (neuronal)	0.0	
chr12	127762569	127762677	reg1044216.p1	3.906	+	NM_052907	-1951462	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-2212555	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-2212682	+	NM_001136103	989324	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	1545820	-	BC043528 TSC_hg19_v1_chr12_+_129337985	1575361	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.0	
chr12	48551311	48551487	reg1035042.p1	3.906	+	TSC_hg19_v1_chr12_-_48551274 AF464877 AK024908 BC001321 AK297013 AK289957 NM_024095	-77	-	D21861 NM_001166687 NM_001166688 Y00698 BC000534 BC012799 BC013298 AB463168 CU674264 CU676868 BC007798	-34904	+	NM_000289 D21862 TSC_hg19_v1_chr12_+_48513146 M26066 U24183 AK312284 BC021203	-38313	+	NM_001013635 AK056003 BC036801 TSC_hg19_v1_chr12_+_48577419 BC049387	26006	+	TSC_hg19_v1_chr12_+_48592139 AK125945 CR749551	40755	+	AB587540 NM_001004134 BC136757 BC136758	45722	-	AF464877|ASB8|140461|ankyrin repeat and SOCS box containing 8##AK024908|ASB8|140461|ankyrin repeat and SOCS box containing 8##BC001321|ASB8|140461|ankyrin repeat and SOCS box containing 8##AK297013|ASB8|140461|ankyrin repeat and SOCS box containing 8##AK289957|ASB8|140461|ankyrin repeat and SOCS box containing 8##NM_024095|ASB8|140461|ankyrin repeat and SOCS box containing 8##D21861|PFKM|5213|phosphofructokinase, muscle##NM_001166687|PFKM|5213|phosphofructokinase, muscle##NM_001166688|PFKM|5213|phosphofructokinase, muscle##Y00698|PFKM|5213|phosphofructokinase, muscle##BC000534|PFKM|5213|phosphofructokinase, muscle##BC012799|PFKM|5213|phosphofructokinase, muscle##BC013298|PFKM|5213|phosphofructokinase, muscle##BC007798|PFKM|5213|phosphofructokinase, muscle##NM_000289|PFKM|5213|phosphofructokinase, muscle##M26066|PFKM|5213|phosphofructokinase, muscle##U24183|PFKM|5213|phosphofructokinase, muscle##AK312284|PFKM|5213|phosphofructokinase, muscle##BC021203|PFKM|5213|phosphofructokinase, muscle##NM_001013635|C12orf68|387856|chromosome 12 open reading frame 68##AK056003|C12orf68|387856|chromosome 12 open reading frame 68##BC036801|C12orf68|387856|chromosome 12 open reading frame 68##BC049387|C12orf68|387856|chromosome 12 open reading frame 68##AK125945|DKFZP779L1853|643162|uncharacterized LOC643162##CR749551|DKFZP779L1853|643162|uncharacterized LOC643162##NM_001004134|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1##BC136757|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1##BC136758|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1	0.137922	
chr19	6674900	6675070	reg1024753.p1	3.906	+	AF064090 NM_003807 NM_172014	-4387	-	TSC_hg19_v1_chr19_-_6670094 CR541854 CR541871 AB528780 AF036581 AY028261 AY358812 BC018058 AK292037	-4861	-	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	-83827	-	TSC_hg19_v1_chr19_-_6720662 BC063852 BC150179 BC150200 K02765 AK304071 BC150299 NM_000064 AK299114	45671	-	AL365404 TSC_hg19_v1_chr19_-_6737583	62590	-	TSC_hg19_v1_chr19_-_6737592 AK291968	62610	-	AF064090|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_003807|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_172014|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541854|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541871|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF036581|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY028261|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY358812|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC018058|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AK292037|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule##BC063852|C3|718|complement component 3##BC150179|C3|718|complement component 3##BC150200|C3|718|complement component 3##K02765|C3|718|complement component 3##AK304071|C3|718|complement component 3##BC150299|C3|718|complement component 3##NM_000064|C3|718|complement component 3##AL365404|GPR108|56927|G protein-coupled receptor 108##AK291968|GPR108|56927|G protein-coupled receptor 108	0.0	
chr3	16925879	16926060	reg1012061.p2	3.906	+	U65918 U66726 U66078 BC027595 NM_001351	-279003	-	BX648638 AK303026 NM_001190811	-279699	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	-370745	-	AB029015 NM_001144382	482	+	BC036392 NM_015184	48612	+	AK310539 NM_001134381	815542	-	U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5	0.0	
chr3	56738868	56738956	reg1033224.p2	3.906	+	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-21705	-	BC029354 NM_015224	-40839	-	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	-147666	+	AK293864 AB209661 NM_001128616	70757	-	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	96999	-	AY221117 NM_181727 BC126274 BC136498	355591	+	BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##BC029354|FAM208A|23272|family with sequence similarity 208, member A##NM_015224|FAM208A|23272|family with sequence similarity 208, member A##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12	0.0	
chr8	123859804	123859870	reg1035537.p1	3.906	+	TSC_hg19_v1_chr8_+_123794108 AB020661	-65734	+	BC042145 TSC_hg19_v1_chr8_+_123794000	-65843	+	TSC_hg19_v1_chr8_+_123793897 NM_014943	-65926	+	TSC_hg19_v1_chr8_+_123963651 EU446694 AB083653	103862	+	BC002457 TSC_hg19_v1_chr8_-_124054522	194670	-	AY358818 TSC_hg19_v1_chr8_-_124054540 AK303826	194703	-	AB020661|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##EU446694|ZHX2|22882|zinc fingers and homeoboxes 2##AB083653|ZHX2|22882|zinc fingers and homeoboxes 2##BC002457|DERL1|79139|Der1-like domain family, member 1##AY358818|DERL1|79139|Der1-like domain family, member 1##AK303826|DERL1|79139|Der1-like domain family, member 1	0.0	
chr8	86112777	86112843	reg1035330.p1	3.906	+	NM_001083589	-12901	+	TSC_hg19_v1_chr8_+_86089641 AB590542	-23164	+	NM_001083588 NM_001951 U31556 TSC_hg19_v1_chr8_+_86089622 Z78409 X86097	-23189	+	BC032347 TSC_hg19_v1_chr8_-_86132612 BC146983 BC146988 BC157825 BC171873 AK000414 BC055092 BC062221 NM_001099670 NM_001099671 NM_001099672 NM_001099673	19794	-	TSC_hg19_v1_chr8_+_86132857 AK093753	19981	+	TSC_hg19_v1_chr8_+_86157708 NM_198584	44897	+	NM_001083589|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001083588|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001951|E2F5|1875|E2F transcription factor 5, p130-binding##U31556|E2F5|1875|E2F transcription factor 5, p130-binding##Z78409|E2F5|1875|E2F transcription factor 5, p130-binding##X86097|E2F5|1875|E2F transcription factor 5, p130-binding##BC032347|C8orf59|401466|chromosome 8 open reading frame 59##BC146983|C8orf59|401466|chromosome 8 open reading frame 59##BC146988|C8orf59|401466|chromosome 8 open reading frame 59##BC157825|C8orf59|401466|chromosome 8 open reading frame 59##BC171873|C8orf59|401466|chromosome 8 open reading frame 59##BC055092|C8orf59|401466|chromosome 8 open reading frame 59##BC062221|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099670|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099671|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099672|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099673|C8orf59|401466|chromosome 8 open reading frame 59##NM_198584|CA13|377677|carbonic anhydrase XIII	0.0	
chrX	10045639	10045779	reg1038261.p2	3.906	+	BC098455 NM_015691	-61916	+	NM_001195081	-110312	+	BC140866 TSC_hg19_v1_chrX_+_9754543	-291166	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	79345	+	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	489850	-	AF035360 NM_001193277 AY112903	499195	-	BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##BC140866|SHROOM2|357|shroom family member 2##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112903|MID1|4281|midline 1 (Opitz/BBB syndrome)	0.0	
chr11	66384016	66384123	reg1030987.p1	3.905	+	TSC_hg19_v1_chr11_+_66360672 AY113179 AF002210 NM_005125 BC105016 BC112055 CR541928	-23371	+	CU689898 TSC_hg19_v1_chr11_-_66360516 AK001648 BC034469 NM_018219	-23548	-	DQ893245 AJ007331 TSC_hg19_v1_chr11_-_66336078 AK313657 BC036451 AF136279 BC011682 BC013359 AF088886 NM_003793	-48044	-	NM_001198836 NM_001198837 NM_001198845 NM_001198846 NM_006328 TSC_hg19_v1_chr11_+_66384100 AF315632 AF315633 EU287938 AK222830 AK297907 AK307254 AK021768 AK292805 AF080561 BC000488 BC023619 DQ294957 EU287939 EU446504	52	+	AB464693 TSC_hg19_v1_chr11_+_66395849	11722	+	NM_001198843 NM_001198844 NM_002896 TSC_hg19_v1_chr11_+_66406176 AK303984 BC021120 AK225071 BC032735	22064	+	AY113179|CCS|9973|copper chaperone for superoxide dismutase##AF002210|CCS|9973|copper chaperone for superoxide dismutase##NM_005125|CCS|9973|copper chaperone for superoxide dismutase##BC105016|CCS|9973|copper chaperone for superoxide dismutase##BC112055|CCS|9973|copper chaperone for superoxide dismutase##CR541928|CCS|9973|copper chaperone for superoxide dismutase##AK001648|CCDC87|55231|coiled-coil domain containing 87##BC034469|CCDC87|55231|coiled-coil domain containing 87##NM_018219|CCDC87|55231|coiled-coil domain containing 87##DQ893245|CTSF|8722|cathepsin F##AJ007331|CTSF|8722|cathepsin F##AK313657|CTSF|8722|cathepsin F##BC036451|CTSF|8722|cathepsin F##AF136279|CTSF|8722|cathepsin F##BC011682|CTSF|8722|cathepsin F##BC013359|CTSF|8722|cathepsin F##AF088886|CTSF|8722|cathepsin F##NM_003793|CTSF|8722|cathepsin F##NM_001198836|RBM14|10432|RNA binding motif protein 14##NM_001198837|RBM14|10432|RNA binding motif protein 14##NM_001198845|RBM14-RBM4|100526737|RBM14-RBM4 readthrough##NM_001198846|RBM14-RBM4|100526737|RBM14-RBM4 readthrough##NM_006328|RBM14|10432|RNA binding motif protein 14##AF315632|RBM14|10432|RNA binding motif protein 14##AF315633|RBM14|10432|RNA binding motif protein 14##AK222830|RBM14|10432|RNA binding motif protein 14##AK021768|RBM14|10432|RNA binding motif protein 14##AF080561|RBM14|10432|RNA binding motif protein 14##BC000488|RBM14|10432|RNA binding motif protein 14##BC023619|RBM14|10432|RNA binding motif protein 14##DQ294957|RBM14|10432|RNA binding motif protein 14##EU446504|RBM14|10432|RNA binding motif protein 14##NM_001198843|RBM4|5936|RNA binding motif protein 4##NM_001198844|RBM4|5936|RNA binding motif protein 4##NM_002896|RBM4|5936|RNA binding motif protein 4##AK303984|RBM4|5936|RNA binding motif protein 4##BC021120|RBM4|5936|RNA binding motif protein 4##AK225071|RBM4|5936|RNA binding motif protein 4##BC032735|RBM4|5936|RNA binding motif protein 4	0.0	
chr1	186344610	186344757	reg1031288.p1	3.905	+	TSC_hg19_v1_chr1_-_186344395 NM_003292 X63105 X66397	-244	-	TSC_hg19_v1_chr1_-_186344387 BC094764	-298	-	BC016514 TSC_hg19_v1_chr1_-_186344361	-338	-	TSC_hg19_v1_chr1_-_186344848 AK309473	158	-	NM_001164245 NM_001164246 NM_017847 TSC_hg19_v1_chr1_+_186344992 AK298107 AK000512 AY854248 BC003397	289	+	BC069096 NM_022375	25020	+	NM_003292|TPR|7175|translocated promoter region (to activated MET oncogene)##X63105|TPR|7175|translocated promoter region (to activated MET oncogene)##X66397|TPR|7175|translocated promoter region (to activated MET oncogene)##BC094764|TPR|7175|translocated promoter region (to activated MET oncogene)##BC016514|TPR|7175|translocated promoter region (to activated MET oncogene)##AK309473|TPR|7175|translocated promoter region (to activated MET oncogene)##NM_001164245|C1orf27|54953|chromosome 1 open reading frame 27##NM_001164246|C1orf27|54953|chromosome 1 open reading frame 27##NM_017847|C1orf27|54953|chromosome 1 open reading frame 27##AK298107|C1orf27|54953|chromosome 1 open reading frame 27##AK000512|C1orf27|54953|chromosome 1 open reading frame 27##AY854248|C1orf27|54953|chromosome 1 open reading frame 27##BC003397|C1orf27|54953|chromosome 1 open reading frame 27##BC069096|OCLM|10896|oculomedin##NM_022375|OCLM|10896|oculomedin	1.053779	CTCF.p2:69:0.973
chr1	212769281	212769400	reg1033972.p1	3.905	+	NM_001030287	-30665	+	TSC_hg19_v1_chr1_+_212606264 AF173937 NM_013349 AK074431 AK223135 AY762102 BC008823 AB126219 AF049672	-163028	+	TSC_hg19_v1_chr1_-_212588248 AK297200 NM_001198862 AK024066 NM_018252	-181088	-	NM_001040619 NM_001206484 NM_001206488 NM_001674 TSC_hg19_v1_chr1_+_212782102 AK294296	12695	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	12767	+	NM_001206486 AB066566 AB078026 AB078027 AB528347 AY313926 AY313927 BT006996 CR450334 DQ892723 DQ895972 AB209032	19067	+	NM_001030287|ATF3|467|activating transcription factor 3##AF173937|NENF|29937|neudesin neurotrophic factor##NM_013349|NENF|29937|neudesin neurotrophic factor##AK074431|NENF|29937|neudesin neurotrophic factor##AK223135|NENF|29937|neudesin neurotrophic factor##AY762102|NENF|29937|neudesin neurotrophic factor##BC008823|NENF|29937|neudesin neurotrophic factor##AB126219|NENF|29937|neudesin neurotrophic factor##AF049672|NENF|29937|neudesin neurotrophic factor##AK297200|TMEM206|55248|transmembrane protein 206##NM_001198862|TMEM206|55248|transmembrane protein 206##AK024066|TMEM206|55248|transmembrane protein 206##NM_018252|TMEM206|55248|transmembrane protein 206##NM_001040619|ATF3|467|activating transcription factor 3##NM_001206484|ATF3|467|activating transcription factor 3##NM_001206488|ATF3|467|activating transcription factor 3##NM_001674|ATF3|467|activating transcription factor 3##AK294296|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3##NM_001206486|ATF3|467|activating transcription factor 3##AB066566|ATF3|467|activating transcription factor 3##AB078026|ATF3|467|activating transcription factor 3##AB078027|ATF3|467|activating transcription factor 3##AY313926|ATF3|467|activating transcription factor 3##AY313927|ATF3|467|activating transcription factor 3##BT006996|ATF3|467|activating transcription factor 3##CR450334|ATF3|467|activating transcription factor 3##DQ892723|ATF3|467|activating transcription factor 3##DQ895972|ATF3|467|activating transcription factor 3##AB209032|ATF3|467|activating transcription factor 3	0.0	
chr1	31205572	31205676	reg1034174.p2	3.905	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	-9192	-	TSC_hg19_v1_chr1_+_31191648 AK057725	-13993	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-1642576	+	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	25008	-	TSC_hg19_v1_chr1_-_31230697 NM_006762	25066	-	TSC_hg19_v1_chr1_-_31345363 AL049426	139774	-	AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5##NM_006762|LAPTM5|7805|lysosomal protein transmembrane 5##AL049426|SDC3|9672|syndecan 3	0.355934	CTCF.p2:-39:0.356
chr13	31371305	31371460	reg1031940.p1	3.905	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	-61667	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	-61718	+	AK314143 NM_001204406	-83768	+	NM_032849 AK055635 TSC_hg19_v1_chr13_+_31480407 AL832478 BC040165 BC101624 BC101626 CU691826	109098	+	TSC_hg19_v1_chr13_+_31506809 BC030277 NM_152325 CU688876	135448	+	CU691504 DQ891727 DQ894904 AF039695 TSC_hg19_v1_chr13_-_31735849	364412	-	BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_032849|C13orf33|84935|chromosome 13 open reading frame 33##AK055635|C13orf33|84935|chromosome 13 open reading frame 33##BC040165|C13orf33|84935|chromosome 13 open reading frame 33##BC101624|C13orf33|84935|chromosome 13 open reading frame 33##BC101626|C13orf33|84935|chromosome 13 open reading frame 33##BC030277|C13orf26|122046|chromosome 13 open reading frame 26##NM_152325|C13orf26|122046|chromosome 13 open reading frame 26##DQ891727|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ894904|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AF039695|HSPH1|10808|heat shock 105kDa/110kDa protein 1	0.0	
chr14	75965764	75965944	reg1025315.p2	3.905	+	BC051303 NM_001135049	-67018	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	-70841	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	-71213	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	22936	+	TSC_hg19_v1_chr14_+_75988840 D42106	22998	+	NM_017791 AY260572 AY260577 BC019087 AK000378	79111	+	BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	0.203666	CTCF.p2:6:0.204
chr14	93439745	93439841	reg1032374.p1	3.905	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-50196	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	-50349	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-179107	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	141798	-	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	142421	-	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	211407	-	AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1	0.011032	
chr15	65537604	65537692	reg1035960.p2	3.905	+	BC035776 AF035408 AY358904 AK225652 AK225926 AK313352 TSC_hg19_v1_chr15_-_65503811 NM_003613	-33836	-	TSC_hg19_v1_chr15_-_65477676 AL136922 AK308133 AK292316 AK310614	-59962	-	TSC_hg19_v1_chr15_-_65477471 BC130373 BC136487 BC144166 AJ006267 NM_006660	-60147	-	BC006389 NM_017851 TSC_hg19_v1_chr15_-_65579223 AK000516	41512	-	BC042054 TSC_hg19_v1_chr15_-_65670341 BC067107 NM_004884	132703	-	TSC_hg19_v1_chr15_-_65715258 AB529157	177597	-	BC035776|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AF035408|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AY358904|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225652|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225926|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK313352|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##NM_003613|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AL136922|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK308133|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK292316|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AK310614|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC130373|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC136487|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC144166|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##AJ006267|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##NM_006660|CLPX|10845|ClpX caseinolytic peptidase X homolog (E. coli)##BC006389|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##NM_017851|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##AK000516|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3	0.249252	CTCF.p2:73:0.249
chr17	47826218	47826399	reg1029154.p1	3.905	+	BX641166 TSC_hg19_v1_chr17_-_47785555	-40758	-	TSC_hg19_v1_chr17_-_47785283 AK296073 D87989 NM_005827 BC011888 AK293563	-41010	-	AK098056 CU680094 DQ893425 EU176812 TSC_hg19_v1_chr17_-_47785254	-41115	-	AF123073 BC065199 TSC_hg19_v1_chr17_-_47841483	15171	-	NM_030802 BC037572 TSC_hg19_v1_chr17_-_47841551	15238	-	NM_001199155 NM_001199156 NM_001199157 NM_001199158 NM_007067 TSC_hg19_v1_chr17_+_47866042 AK293976 AK294014 AK023890 AK294052 AK294836 AF140360	39710	+	BX641166|SLC35B1|10237|solute carrier family 35, member B1##AK296073|SLC35B1|10237|solute carrier family 35, member B1##D87989|SLC35B1|10237|solute carrier family 35, member B1##NM_005827|SLC35B1|10237|solute carrier family 35, member B1##BC011888|SLC35B1|10237|solute carrier family 35, member B1##AK293563|SLC35B1|10237|solute carrier family 35, member B1##AK098056|SLC35B1|10237|solute carrier family 35, member B1##DQ893425|SLC35B1|10237|solute carrier family 35, member B1##EU176812|SLC35B1|10237|solute carrier family 35, member B1##AF123073|FAM117A|81558|family with sequence similarity 117, member A##BC065199|FAM117A|81558|family with sequence similarity 117, member A##NM_030802|FAM117A|81558|family with sequence similarity 117, member A##BC037572|FAM117A|81558|family with sequence similarity 117, member A##NM_001199155|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199156|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199157|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199158|KAT7|11143|K(lysine) acetyltransferase 7##NM_007067|KAT7|11143|K(lysine) acetyltransferase 7##AK293976|KAT7|11143|K(lysine) acetyltransferase 7##AK294014|KAT7|11143|K(lysine) acetyltransferase 7##AK023890|KAT7|11143|K(lysine) acetyltransferase 7##AK294052|KAT7|11143|K(lysine) acetyltransferase 7##AK294836|KAT7|11143|K(lysine) acetyltransferase 7##AF140360|KAT7|11143|K(lysine) acetyltransferase 7	0.0	
chr17	73316353	73316479	reg1032320.p2	3.905	+	TSC_hg19_v1_chr17_-_73285501 AK075239 NM_001126121 NM_001126122 NM_021734	-30887	-	BC001075 BC005120 TSC_hg19_v1_chr17_-_73285471 AL833387	-30944	-	TSC_hg19_v1_chr17_-_73267265 AF225422 NM_001242498 NM_020679	-49102	-	AB385058 AF498925 CR450363 CR541942 DQ891830 DQ894923 CU674310 L29511 TSC_hg19_v1_chr17_-_73389844	73361	-	AK091010 TSC_hg19_v1_chr17_-_73401721	85228	-	TSC_hg19_v1_chr17_-_73401738 BC000631	85318	-	AK075239|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126121|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_001126122|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##NM_021734|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC001075|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##BC005120|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AL833387|SLC25A19|60386|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19##AF225422|MIF4GD|57409|MIF4G domain containing##NM_001242498|MIF4GD|57409|MIF4G domain containing##NM_020679|MIF4GD|57409|MIF4G domain containing##AF498925|GRB2|2885|growth factor receptor-bound protein 2##CR450363|GRB2|2885|growth factor receptor-bound protein 2##CR541942|GRB2|2885|growth factor receptor-bound protein 2##DQ891830|GRB2|2885|growth factor receptor-bound protein 2##DQ894923|GRB2|2885|growth factor receptor-bound protein 2##L29511|GRB2|2885|growth factor receptor-bound protein 2##AK091010|GRB2|2885|growth factor receptor-bound protein 2##BC000631|GRB2|2885|growth factor receptor-bound protein 2	0.0	
chr2	139259108	139259226	reg1036443.p2	3.905	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	-537233	+	NM_001080427	-1510706	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-1736051	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	226	+	TSC_hg19_v1_chr2_+_139259500 AK021919	323	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	278639	-	NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2	0.0	
chr2	172335813	172335880	reg1041317.p1	3.905	+	TSC_hg19_v1_chr2_-_172291283 AK292108 NM_024770 AK297141	-44561	-	TSC_hg19_v1_chr2_+_172290837 BC140843 BC144653	-44938	+	TSC_hg19_v1_chr2_+_172290824 CR933646	-45035	+	TSC_hg19_v1_chr2_-_172374248 AB055776	38400	-	AK301485 TSC_hg19_v1_chr2_+_172378762	42913	+	TSC_hg19_v1_chr2_+_172379020 NM_001127383 NM_024843 AK128495 AK316588 AL136693 BC016900 AK291731 AK027115 AK225459 BC065290 HQ257890	43109	+	AK292108|METTL8|79828|methyltransferase like 8##NM_024770|METTL8|79828|methyltransferase like 8##AK297141|METTL8|79828|methyltransferase like 8##BC140843|DCAF17|80067|DDB1 and CUL4 associated factor 17##BC144653|DCAF17|80067|DDB1 and CUL4 associated factor 17##CR933646|DCAF17|80067|DDB1 and CUL4 associated factor 17##AK301485|CYBRD1|79901|cytochrome b reductase 1##NM_001127383|CYBRD1|79901|cytochrome b reductase 1##NM_024843|CYBRD1|79901|cytochrome b reductase 1##AK128495|CYBRD1|79901|cytochrome b reductase 1##AK316588|CYBRD1|79901|cytochrome b reductase 1##AL136693|CYBRD1|79901|cytochrome b reductase 1##BC016900|CYBRD1|79901|cytochrome b reductase 1##AK291731|CYBRD1|79901|cytochrome b reductase 1##AK027115|CYBRD1|79901|cytochrome b reductase 1##AK225459|CYBRD1|79901|cytochrome b reductase 1##BC065290|CYBRD1|79901|cytochrome b reductase 1##HQ257890|CYBRD1|79901|cytochrome b reductase 1	0.0	
chr5	111522217	111522339	reg1034022.p1	3.905	+	TSC_hg19_v1_chr5_+_111496560 AB002437	-25709	+	AK298779 NM_001142474 NM_001142475	-209704	-	NM_001142477 TSC_hg19_v1_chr5_-_111093886 NM_001142476	-428425	-	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	232595	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	520933	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	551295	+	AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13##AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli	0.902876	CTCF.p2:10:0.903
chr5	160226129	160226282	reg1036946.p1	3.905	+	AK025130 TSC_hg19_v1_chr5_-_160112393	-113866	-	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-377302	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-377351	+	AB018258 AK295081 AK090832 AX746642 NM_025153	52926	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	748921	-	NM_000811	886452	+	AK025130|ATP10B|23120|ATPase, class V, type 10B##BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6	0.0	
chr7	72623866	72624002	reg1033759.p1	3.905	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	-54903	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-198692	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-227060	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	98890	-	AK057366 AY081948 AY081949 NM_178125	118150	-	NM_001135211 AK302121 NM_003602 AK310255 BC036817 AF038847 CU691432 EU176233 EU176537 GQ129339 GQ129340	118358	+	BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50##NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa##AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa##NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa##AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa##BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa##AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa	0.0	
chr9	126962534	126962714	reg1032460.p2	3.905	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-188553	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-188741	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-270313	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	57386	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	57621	+	TSC_hg19_v1_chr9_+_127020255 AB026289	57640	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr10	3827325	3827410	reg1040449.p1	3.904	+	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-56	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-612362	-	CU678866 TSC_hg19_v1_chr10_-_3214975 AB384562 BC005025 AK225084 AK293788 AK315117 AK294865 AK299464 AK303406 BC095422 BX649017 AF061243	-612397	-	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	142	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1041051	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1178147	+	BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC005025|PITRM1|10531|pitrilysin metallopeptidase 1##AK225084|PITRM1|10531|pitrilysin metallopeptidase 1##AK293788|PITRM1|10531|pitrilysin metallopeptidase 1##AK315117|PITRM1|10531|pitrilysin metallopeptidase 1##AK294865|PITRM1|10531|pitrilysin metallopeptidase 1##AK299464|PITRM1|10531|pitrilysin metallopeptidase 1##AK303406|PITRM1|10531|pitrilysin metallopeptidase 1##BC095422|PITRM1|10531|pitrilysin metallopeptidase 1##BX649017|PITRM1|10531|pitrilysin metallopeptidase 1##AF061243|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr11	19496851	19496998	reg1034332.p2	3.904	+	AB063115 NM_001111018 AJ488205	-124609	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-233723	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-234449	-	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	237942	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	547464	+	TSC_hg19_v1_chr11_+_20049136 AK307574	552208	+	AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2	0.0	
chr12	103289975	103290126	reg1032078.p1	3.904	+	AB209184 NM_000618 NM_001111283 NM_001111285 TSC_hg19_v1_chr12_-_102874389	-415668	-	M11568 TSC_hg19_v1_chr12_-_102874344	-415708	-	AK312231 X57025 TSC_hg19_v1_chr12_-_102874323	-415728	-	TSC_hg19_v1_chr12_-_103310998 CU693178 AK298419 AK313383	20916	-	TSC_hg19_v1_chr12_-_103311062 BC026251	21013	-	L47726 NM_000277 U49897	21330	-	AB209184|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_000618|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111283|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111285|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M11568|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK312231|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X57025|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##AK298419|PAH|5053|phenylalanine hydroxylase##AK313383|PAH|5053|phenylalanine hydroxylase##BC026251|PAH|5053|phenylalanine hydroxylase##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase	0.978388	CTCF.p2:-17:0.978
chr12	6876057	6876160	reg1028589.p1	3.904	+	TSC_hg19_v1_chr12_+_6875713 BC128229 BC017025 AB463999	-331	+	TSC_hg19_v1_chr12_+_6875614 M24398	-513	+	TSC_hg19_v1_chr12_+_6875528 NM_002824	-588	+	NM_002286 BC037962 BC052589 AK292104 X51985	5620	+	TSC_hg19_v1_chr12_+_6898631 NM_000616 NM_001195014 NM_001195015 NM_001195016 NM_001195017	22515	+	TSC_hg19_v1_chr12_+_6898691 AK316461	22576	+	BC128229|PTMS|5763|parathymosin##BC017025|PTMS|5763|parathymosin##M24398|PTMS|5763|parathymosin##NM_002824|PTMS|5763|parathymosin##NM_002286|LAG3|3902|lymphocyte-activation gene 3##BC037962|LAG3|3902|lymphocyte-activation gene 3##BC052589|LAG3|3902|lymphocyte-activation gene 3##AK292104|LAG3|3902|lymphocyte-activation gene 3##X51985|LAG3|3902|lymphocyte-activation gene 3##NM_000616|CD4|920|CD4 molecule##NM_001195014|CD4|920|CD4 molecule##NM_001195015|CD4|920|CD4 molecule##NM_001195016|CD4|920|CD4 molecule##NM_001195017|CD4|920|CD4 molecule##AK316461|CD4|920|CD4 molecule	0.100311	
chr15	29604740	29604901	reg1028852.p2	3.904	+	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	-42791	-	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	-42850	-	NM_001130414 NM_005503 AF047348 BC082986	-390971	+	NM_015307	258106	-	AK304758 TSC_hg19_v1_chr15_-_30114336	509522	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	509803	-	AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)	0.0	
chr15	41234183	41234314	reg1034236.p1	3.904	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	-12550	+	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	-47548	+	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	-67801	-	NM_001142776 NM_024111 TSC_hg19_v1_chr15_+_41245671 BC019625 BC001683 BC001847 AY702027	11456	+	TSC_hg19_v1_chr15_-_41364176 AK057582	129956	-	BC144681 AB033085 NM_017553 BC146785 TSC_hg19_v1_chr15_-_41408344	174089	-	NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)##AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##NM_001142776|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##NM_024111|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC019625|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001683|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001847|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AY702027|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AK057582|INO80|54617|INO80 homolog (S. cerevisiae)##BC144681|INO80|54617|INO80 homolog (S. cerevisiae)##AB033085|INO80|54617|INO80 homolog (S. cerevisiae)##NM_017553|INO80|54617|INO80 homolog (S. cerevisiae)##BC146785|INO80|54617|INO80 homolog (S. cerevisiae)	0.936776	CTCF.p2:-18:0.823
chr17	75416888	75417000	reg1034871.p1	3.904	+	AB023208 NM_001113494 AJ312322	-44775	+	TSC_hg19_v1_chr17_+_75369418 AK304143	-47519	+	TSC_hg19_v1_chr17_+_75369236 AJ312319 NM_001113493	-47691	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	29701	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	29838	+	AK299828 TSC_hg19_v1_chr17_+_75447450	30445	+	AB023208|SEPT9|10801|septin 9##NM_001113494|SEPT9|10801|septin 9##AJ312322|SEPT9|10801|septin 9##AK304143|SEPT9|10801|septin 9##AJ312319|SEPT9|10801|septin 9##NM_001113493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9	0.0	
chr20	48286219	48286399	reg1031800.p1	3.904	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	-101620	-	BC110572 BC110573 NM_004975	-187130	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-391114	+	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	43921	-	AB004550 TSC_hg19_v1_chr20_-_48330359	44047	-	TSC_hg19_v1_chr20_-_48330471 NM_004776	44157	-	AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.0	
chr20	55973729	55973819	reg1033158.p2	3.904	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-7317	+	NM_001190472	-38897	-	AK292247 AY349350 NM_001015885	-47173	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	126427	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	162383	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	221764	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.0	
chr3	156392792	156392866	reg1000590.p4	3.904	+	CR749647 NM_001184717	-115	+	AK291261 TSC_hg19_v1_chr3_+_156392402 BX537965 BC050350	-427	+	NM_015508	-625	+	AK097785 TSC_hg19_v1_chr3_+_156393472	586	+	BC034397 NM_001184718	1623	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	151282	+	CR749647|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184717|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1	0.0	
chr4	39640880	39640946	reg1035135.p2	3.904	+	TSC_hg19_v1_chr4_-_39640486 AK023351 BC008502 NM_174921 AK307146	-357	-	TSC_hg19_v1_chr4_+_39529635 AK056558	-111287	+	TSC_hg19_v1_chr4_-_39529187 NM_001184700 NM_001184701 NM_003359	-111738	-	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	58891	+	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	338425	-	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	338680	-	AK023351|C4orf34|201895|chromosome 4 open reading frame 34##BC008502|C4orf34|201895|chromosome 4 open reading frame 34##NM_174921|C4orf34|201895|chromosome 4 open reading frame 34##AK307146|C4orf34|201895|chromosome 4 open reading frame 34##NM_001184700|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001184701|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_003359|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	0.0	
chr5	133449764	133449858	reg1027893.p1	3.904	+	AK095989 NM_003374	-108988	-	TSC_hg19_v1_chr5_-_133340431 L06132	-109381	-	TSC_hg19_v1_chr5_-_133340397 BC071168 AK293639	-109410	-	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	708	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	1550	+	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	62812	-	AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##L06132|VDAC1|7416|voltage-dependent anion channel 1##BC071168|VDAC1|7416|voltage-dependent anion channel 1##AK293639|VDAC1|7416|voltage-dependent anion channel 1##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1	0.0	
chr6	26342442	26342622	reg1007755.p2	3.904	+	BC120939 CR542169 CR542187 NM_003543 DQ892790 DQ896037 BC010926 TSC_hg19_v1_chr6_-_26285763	-56787	-	BC101653 BC101655 EU446969 NM_003525	-69359	+	TSC_hg19_v1_chr6_-_26271642 AB591037 EU446974 NM_003534 BC079835	-70915	-	NM_001197247 NM_001197249 NM_007047 TSC_hg19_v1_chr6_+_26365425 AK312847 AK290880 U90546 AK303600 NM_001197248 BC002832 BC020214 AK299417	22920	+	AF257505 NM_001197246	25873	+	NM_001197238 NM_001197239 NM_001197240 NM_006995 NM_181531 AK304744 AK289883 AK293526 AK298570 U90550 BC017497 NM_001197237 BC014021	40860	+	BC120939|HIST1H4H|8365|histone cluster 1, H4h##CR542169|HIST1H4H|8365|histone cluster 1, H4h##CR542187|HIST1H4H|8365|histone cluster 1, H4h##NM_003543|HIST1H4H|8365|histone cluster 1, H4h##DQ892790|HIST1H4H|8365|histone cluster 1, H4h##DQ896037|HIST1H4H|8365|histone cluster 1, H4h##BC010926|HIST1H4H|8365|histone cluster 1, H4h##BC101653|HIST1H2BI|8346|histone cluster 1, H2bi##BC101655|HIST1H2BI|8346|histone cluster 1, H2bi##EU446969|HIST1H2BI|8346|histone cluster 1, H2bi##NM_003525|HIST1H2BI|8346|histone cluster 1, H2bi##EU446974|HIST1H3G|8355|histone cluster 1, H3g##NM_003534|HIST1H3G|8355|histone cluster 1, H3g##BC079835|HIST1H3G|8355|histone cluster 1, H3g##NM_001197247|BTN3A2|11118|butyrophilin, subfamily 3, member A2##NM_001197249|BTN3A2|11118|butyrophilin, subfamily 3, member A2##NM_007047|BTN3A2|11118|butyrophilin, subfamily 3, member A2##AK312847|BTN3A2|11118|butyrophilin, subfamily 3, member A2##AK290880|BTN3A2|11118|butyrophilin, subfamily 3, member A2##U90546|BTN3A2|11118|butyrophilin, subfamily 3, member A2##AK303600|BTN3A2|11118|butyrophilin, subfamily 3, member A2##NM_001197248|BTN3A2|11118|butyrophilin, subfamily 3, member A2##BC002832|BTN3A2|11118|butyrophilin, subfamily 3, member A2##BC020214|BTN3A2|11118|butyrophilin, subfamily 3, member A2##AK299417|BTN3A2|11118|butyrophilin, subfamily 3, member A2##AF257505|BTN3A2|11118|butyrophilin, subfamily 3, member A2##NM_001197246|BTN3A2|11118|butyrophilin, subfamily 3, member A2##NM_001197238|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197239|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197240|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_006995|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_181531|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK304744|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK289883|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK293526|BTN2A2|10385|butyrophilin, subfamily 2, member A2##AK298570|BTN2A2|10385|butyrophilin, subfamily 2, member A2##U90550|BTN2A2|10385|butyrophilin, subfamily 2, member A2##BC017497|BTN2A2|10385|butyrophilin, subfamily 2, member A2##NM_001197237|BTN2A2|10385|butyrophilin, subfamily 2, member A2##BC014021|BTN2A2|10385|butyrophilin, subfamily 2, member A2	0.0	
chr6	54602209	54602304	reg1033958.p1	3.904	+	BC070278 NM_014464 AK312918 BC056235 AB022277 AF195116 AF195117 CU687080 CU691132 EU832329 EU832414	-428981	+	NM_138569 BX647567 AK055530	-718506	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	-942325	+	AK055204 NM_001010872 BC101628 BC112275	109332	+	NM_001526 AK314279	436838	+	AY358198 NM_207410	590010	+	BC070278|TINAG|27283|tubulointerstitial nephritis antigen##NM_014464|TINAG|27283|tubulointerstitial nephritis antigen##AK312918|TINAG|27283|tubulointerstitial nephritis antigen##BC056235|TINAG|27283|tubulointerstitial nephritis antigen##AB022277|TINAG|27283|tubulointerstitial nephritis antigen##AF195116|TINAG|27283|tubulointerstitial nephritis antigen##AF195117|TINAG|27283|tubulointerstitial nephritis antigen##EU832329|TINAG|27283|tubulointerstitial nephritis antigen##EU832414|TINAG|27283|tubulointerstitial nephritis antigen##NM_138569|MLIP|90523|muscular LMNA-interacting protein##BX647567|MLIP|90523|muscular LMNA-interacting protein##AK055530|MLIP|90523|muscular LMNA-interacting protein##AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1##AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B##NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2##AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2##AY358198|GFRAL|389400|GDNF family receptor alpha like##NM_207410|GFRAL|389400|GDNF family receptor alpha like	0.980617	CTCF.p2:-1:0.981
chr7	100136335	100136481	reg1032167.p2	3.904	+	AK124773 NM_173564	-54859	+	BC001966 BC031622 AK314824 TSC_hg19_v1_chr7_-_100076802 BC002972 BC010406 AK296580 AK297702 AK310800 BC001486 NM_030935	-59581	-	BC031966 NM_001004323	-74515	-	TSC_hg19_v1_chr7_+_100136826 NM_006076 BC009393	403	+	TSC_hg19_v1_chr7_+_100136847 AK314954 BC017329 AB527774 CU675942	499	+	NM_001168682	34861	-	AK124773|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_173564|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##BC001966|TSC22D4|81628|TSC22 domain family, member 4##BC031622|TSC22D4|81628|TSC22 domain family, member 4##AK314824|TSC22D4|81628|TSC22 domain family, member 4##BC002972|TSC22D4|81628|TSC22 domain family, member 4##BC010406|TSC22D4|81628|TSC22 domain family, member 4##AK296580|TSC22D4|81628|TSC22 domain family, member 4##AK297702|TSC22D4|81628|TSC22 domain family, member 4##BC001486|TSC22D4|81628|TSC22 domain family, member 4##NM_030935|TSC22D4|81628|TSC22 domain family, member 4##BC031966|C7orf61|402573|chromosome 7 open reading frame 61##NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61##NM_006076|AGFG2|3268|ArfGAP with FG repeats 2##BC009393|AGFG2|3268|ArfGAP with FG repeats 2##AK314954|AGFG2|3268|ArfGAP with FG repeats 2##BC017329|AGFG2|3268|ArfGAP with FG repeats 2##NM_001168682|SAP25|100316904|Sin3A-associated protein, 25kDa	0.0	
chr9	127026216	127026335	reg1035635.p1	3.904	+	TSC_hg19_v1_chr9_+_127020588 AL832574	-5685	+	TSC_hg19_v1_chr9_+_127020519 NM_001166168 AK313071	-5752	+	TSC_hg19_v1_chr9_+_127020255 AB026289	-6011	+	TSC_hg19_v1_chr9_+_127054267 NM_001166170 NM_001166171	27984	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	28357	+	TSC_hg19_v1_chr9_+_127119114 BC042968	92894	+	NM_001166168|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AK313071|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166170|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166171|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr10	70825471	70825613	reg1029491.p1	3.903	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-77007	+	BC104671 NM_004728 TSC_hg19_v1_chr10_+_70715925 BC009432 U41387 AK315585 BC008071 BC004182 BC017228 AB527408 CU675917	-109610	+	TSC_hg19_v1_chr10_+_70661097 CU674120 DQ892547 DQ895758	-164425	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	22294	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	22342	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	58349	+	NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##BC104671|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##NM_004728|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC009432|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##U41387|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##AK315585|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC008071|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC004182|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC017228|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##DQ892547|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##DQ895758|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##NM_002727|SRGN|5552|serglycin##D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.0	
chr11	128499959	128500139	reg1001220.p2	3.903	+	BX640634 NM_001143820	-42597	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	-107915	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	-108086	-	TSC_hg19_v1_chr11_+_128563793 NM_001167681 NM_002017	63749	+	TSC_hg19_v1_chr11_+_128563966 AK313370	63912	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	63931	+	BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001167681|FLI1|2313|Friend leukemia virus integration 1##NM_002017|FLI1|2313|Friend leukemia virus integration 1##AK313370|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1	0.0	
chr11	45954980	45955047	reg1032245.p2	3.903	+	TSC_hg19_v1_chr11_+_45944226 BC037291	-10797	+	AK055829 AK096021 NM_152312	-11830	+	TSC_hg19_v1_chr11_-_45939595 AF118240 NM_004813 NM_057174	-15393	-	TSC_hg19_v1_chr11_-_46142986 AK023258 NM_001101802 NM_016621	187984	-	TSC_hg19_v1_chr11_+_46299212 AK314072 NM_052854	344192	+	BC014097 TSC_hg19_v1_chr11_+_46299557 BC015781 AB063321	344547	+	BC037291|GYLTL1B|120071|glycosyltransferase-like 1B##AK055829|GYLTL1B|120071|glycosyltransferase-like 1B##AK096021|GYLTL1B|120071|glycosyltransferase-like 1B##NM_152312|GYLTL1B|120071|glycosyltransferase-like 1B##AF118240|PEX16|9409|peroxisomal biogenesis factor 16##NM_004813|PEX16|9409|peroxisomal biogenesis factor 16##NM_057174|PEX16|9409|peroxisomal biogenesis factor 16##AK023258|PHF21A|51317|PHD finger protein 21A##NM_001101802|PHF21A|51317|PHD finger protein 21A##NM_016621|PHF21A|51317|PHD finger protein 21A##AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	0.764135	CTCF.p2:-20:0.764
chr19	49846279	49846385	reg1032689.p2	3.903	+	X14046 TSC_hg19_v1_chr19_+_49838746 BC106752 AK316348 BT019851 CR541877	-7567	+	TSC_hg19_v1_chr19_+_49838702 AL833693 BC110379	-7620	+	TSC_hg19_v1_chr19_+_49838683 NM_001040031 NM_001774 AK301328	-7654	+	AL832240 BC051301 TSC_hg19_v1_chr19_-_49865672 AK300241 AK290736 BC007556 NM_003598	19343	-	NM_001197302 AY358922 NM_001197301 NM_014419 BC030581 AF177398	20764	+	NM_144688 TSC_hg19_v1_chr19_+_49891539 AK057220 AK097696 BC029811	45184	+	X14046|CD37|951|CD37 molecule##BC106752|CD37|951|CD37 molecule##BT019851|CD37|951|CD37 molecule##CR541877|CD37|951|CD37 molecule##AL833693|CD37|951|CD37 molecule##BC110379|CD37|951|CD37 molecule##NM_001040031|CD37|951|CD37 molecule##NM_001774|CD37|951|CD37 molecule##AK301328|CD37|951|CD37 molecule##AL832240|TEAD2|8463|TEA domain family member 2##BC051301|TEAD2|8463|TEA domain family member 2##AK300241|TEAD2|8463|TEA domain family member 2##AK290736|TEAD2|8463|TEA domain family member 2##BC007556|TEAD2|8463|TEA domain family member 2##NM_003598|TEAD2|8463|TEA domain family member 2##NM_001197302|DKKL1|27120|dickkopf-like 1##AY358922|DKKL1|27120|dickkopf-like 1##NM_001197301|DKKL1|27120|dickkopf-like 1##NM_014419|DKKL1|27120|dickkopf-like 1##BC030581|DKKL1|27120|dickkopf-like 1##AF177398|DKKL1|27120|dickkopf-like 1##NM_144688|CCDC155|147872|coiled-coil domain containing 155##AK057220|CCDC155|147872|coiled-coil domain containing 155##AK097696|CCDC155|147872|coiled-coil domain containing 155##BC029811|CCDC155|147872|coiled-coil domain containing 155	0.0	
chr22	36023797	36023977	reg1002467.p2	3.903	+	TSC_hg19_v1_chr22_-_36019368 NM_203377	-4506	-	CR541949 CU013116 CU013404 DQ893679 DQ896050 AB528844 CR456516 TSC_hg19_v1_chr22_-_36013480 AK300657 BC014547 NM_005368 AK314057 NM_203378	-10459	-	BC013419 NM_014310 CR456477	-86494	+	TSC_hg19_v1_chr22_+_36044432 AY014879 NM_030641 BC047864 AX775805 AL834420 AK095881	20549	+	TSC_hg19_v1_chr22_+_36044482 BC038950 AY358210	20613	+	AB528803 AY014878 NM_030642	90030	+	NM_203377|MB|4151|myoglobin##CR541949|MB|4151|myoglobin##CU013116|MB|4151|myoglobin##CU013404|MB|4151|myoglobin##DQ893679|MB|4151|myoglobin##DQ896050|MB|4151|myoglobin##CR456516|MB|4151|myoglobin##AK300657|MB|4151|myoglobin##BC014547|MB|4151|myoglobin##NM_005368|MB|4151|myoglobin##AK314057|MB|4151|myoglobin##NM_203378|MB|4151|myoglobin##BC013419|RASD2|23551|RASD family, member 2##NM_014310|RASD2|23551|RASD family, member 2##CR456477|RASD2|23551|RASD family, member 2##AY014879|APOL6|80830|apolipoprotein L, 6##NM_030641|APOL6|80830|apolipoprotein L, 6##BC047864|APOL6|80830|apolipoprotein L, 6##AL834420|APOL6|80830|apolipoprotein L, 6##AK095881|APOL6|80830|apolipoprotein L, 6##BC038950|APOL6|80830|apolipoprotein L, 6##AY358210|APOL6|80830|apolipoprotein L, 6##AY014878|APOL5|80831|apolipoprotein L, 5##NM_030642|APOL5|80831|apolipoprotein L, 5	0.0	
chr4	24034093	24034192	reg1026425.p2	3.903	+	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	-142489	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	-1339550	+	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	-1516588	-	AF279891 TSC_hg19_v1_chr4_-_24586127	551934	-	TSC_hg19_v1_chr4_-_24586154 AK303506 BC035974	552018	-	AB001636 TSC_hg19_v1_chr4_-_24586176	552034	-	AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.810506	CTCF.p2:-2:0.811
chr4	5714391	5714571	reg1035447.p1	3.903	+	TSC_hg19_v1_chr4_+_5712929 AF216184 AF216185 NM_153717 BC085608 AF239742	-1484	+	AY152402 AY152403 NM_001166136	-3207	-	AY185210 NM_147127 TSC_hg19_v1_chr4_-_5710299	-4181	-	AK091696 TSC_hg19_v1_chr4_-_5828628	114127	-	BT006806 CU674102 DQ892528 DQ895740 TSC_hg19_v1_chr4_-_5889997	175515	-	D78012 TSC_hg19_v1_chr4_-_5890210 AK127754 BC000252 BC007613 AK309379	175708	-	AF216184|EVC|2121|Ellis van Creveld syndrome##AF216185|EVC|2121|Ellis van Creveld syndrome##NM_153717|EVC|2121|Ellis van Creveld syndrome##BC085608|EVC|2121|Ellis van Creveld syndrome##AF239742|EVC|2121|Ellis van Creveld syndrome##AY152402|EVC2|132884|Ellis van Creveld syndrome 2##AY152403|EVC2|132884|Ellis van Creveld syndrome 2##NM_001166136|EVC2|132884|Ellis van Creveld syndrome 2##AY185210|EVC2|132884|Ellis van Creveld syndrome 2##NM_147127|EVC2|132884|Ellis van Creveld syndrome 2##AK091696|CRMP1|1400|collapsin response mediator protein 1##BT006806|CRMP1|1400|collapsin response mediator protein 1##DQ892528|CRMP1|1400|collapsin response mediator protein 1##DQ895740|CRMP1|1400|collapsin response mediator protein 1##D78012|CRMP1|1400|collapsin response mediator protein 1##AK127754|CRMP1|1400|collapsin response mediator protein 1##BC000252|CRMP1|1400|collapsin response mediator protein 1##BC007613|CRMP1|1400|collapsin response mediator protein 1##AK309379|CRMP1|1400|collapsin response mediator protein 1	0.0	
chr5	150614463	150614577	reg1030088.p1	3.903	+	TSC_hg19_v1_chr5_-_150603654 AK292841 AK298063 AL713742 NM_015621	-10840	-	TSC_hg19_v1_chr5_-_150603648 AK225826	-10889	-	TSC_hg19_v1_chr5_-_150537341 NM_001155	-77132	-	NM_000405 NM_001167607 TSC_hg19_v1_chr5_+_150632745 AK225978 L01439 M76477 AK312494 X62078 AK298867 BC009273 X61095 CU679281 DQ891914 DQ895098 X16087	18195	+	AK127978 NM_001145017 NM_181774	68809	-	BC101100 BC101101 BC101102 BC101103 AK297682 AY162214 AK122630 AK309575 NM_181776	112599	-	AK292841|CCDC69|26112|coiled-coil domain containing 69##AK298063|CCDC69|26112|coiled-coil domain containing 69##AL713742|CCDC69|26112|coiled-coil domain containing 69##NM_015621|CCDC69|26112|coiled-coil domain containing 69##AK225826|CCDC69|26112|coiled-coil domain containing 69##NM_001155|ANXA6|309|annexin A6##NM_000405|GM2A|2760|GM2 ganglioside activator##NM_001167607|GM2A|2760|GM2 ganglioside activator##L01439|GM2A|2760|GM2 ganglioside activator##M76477|GM2A|2760|GM2 ganglioside activator##AK312494|GM2A|2760|GM2 ganglioside activator##X62078|GM2A|2760|GM2 ganglioside activator##AK298867|GM2A|2760|GM2 ganglioside activator##BC009273|GM2A|2760|GM2 ganglioside activator##X61095|GM2A|2760|GM2 ganglioside activator##DQ891914|GM2A|2760|GM2 ganglioside activator##DQ895098|GM2A|2760|GM2 ganglioside activator##X16087|GM2A|2760|GM2 ganglioside activator##AK127978|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_001145017|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##NM_181774|SLC36A3|285641|solute carrier family 36 (proton/amino acid symporter), member 3##BC101100|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101101|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101102|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##BC101103|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK297682|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AY162214|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##AK309575|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2##NM_181776|SLC36A2|153201|solute carrier family 36 (proton/amino acid symporter), member 2	0.0	
chr6	159016406	159016497	reg1040172.p1	3.903	+	BC033450 TSC_hg19_v1_chr6_+_158957752	-58749	+	AB037844 NM_020823	-58984	+	TSC_hg19_v1_chr6_+_158734935 AF087973	-281532	+	AB590427 CR456931 DQ892606 DQ892607 DQ895846 DQ895847 EU862237 U56255 TSC_hg19_v1_chr6_-_159065772 D50663 BC105588 BC029412 AK315601 NM_006519	49323	-	TSC_hg19_v1_chr6_+_159071070 NM_001009991 NM_001242384 NM_001242394 NM_001242395 AK092729 AK298712 AX747692 BC085612	54603	+	J05021 X51521 TSC_hg19_v1_chr6_-_159239246	222771	-	BC033450|TMEM181|57583|transmembrane protein 181##AB037844|TMEM181|57583|transmembrane protein 181##NM_020823|TMEM181|57583|transmembrane protein 181##CR456931|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892606|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ892607|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895846|DYNLT1|6993|dynein, light chain, Tctex-type 1##DQ895847|DYNLT1|6993|dynein, light chain, Tctex-type 1##EU862237|DYNLT1|6993|dynein, light chain, Tctex-type 1##U56255|DYNLT1|6993|dynein, light chain, Tctex-type 1##D50663|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC105588|DYNLT1|6993|dynein, light chain, Tctex-type 1##BC029412|DYNLT1|6993|dynein, light chain, Tctex-type 1##AK315601|DYNLT1|6993|dynein, light chain, Tctex-type 1##NM_006519|DYNLT1|6993|dynein, light chain, Tctex-type 1##NM_001009991|SYTL3|94120|synaptotagmin-like 3##NM_001242384|SYTL3|94120|synaptotagmin-like 3##NM_001242394|SYTL3|94120|synaptotagmin-like 3##NM_001242395|SYTL3|94120|synaptotagmin-like 3##AK092729|SYTL3|94120|synaptotagmin-like 3##AK298712|SYTL3|94120|synaptotagmin-like 3##BC085612|SYTL3|94120|synaptotagmin-like 3##J05021|EZR|7430|ezrin##X51521|EZR|7430|ezrin	0.931572	CTCF.p2:2:0.932
chr8	142100123	142100215	reg1031171.p2	3.903	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-88913	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-454545	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-578606	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	38568	+	AK128212 NM_001080431	138503	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	164021	-	AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4	0.0	
chr8	5997608	5997702	reg1032187.p2	3.903	+	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	-1145361	-	AY017307 TSC_hg19_v1_chr8_-_4852228	-1145430	-	AK128880 TSC_hg19_v1_chr8_-_2585966	-3411673	-	TSC_hg19_v1_chr8_-_6264053 BC036625	266402	-	TSC_hg19_v1_chr8_-_6264070 AK025595 BC024246	266419	-	NM_001172574 NM_001172575 NM_024596 BC056195 BC030702 AK308387 TSC_hg19_v1_chr8_+_6264158	266480	+	AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AK025595|LOC100287015|100287015|uncharacterized LOC100287015##NM_001172574|MCPH1|79648|microcephalin 1##NM_001172575|MCPH1|79648|microcephalin 1##NM_024596|MCPH1|79648|microcephalin 1##BC056195|MCPH1|79648|microcephalin 1##BC030702|MCPH1|79648|microcephalin 1##AK308387|MCPH1|79648|microcephalin 1	0.226698	CTCF.p2:6:0.227
chr9	138098322	138098406	reg1031693.p1	3.903	+	AK290478 TSC_hg19_v1_chr9_+_137979513	-118850	+	TSC_hg19_v1_chr9_+_137967404 AK289921 CU679089 BT007146	-130873	+	BC008763 BC011741 TSC_hg19_v1_chr9_+_137967372 AK289719	-130991	+	TSC_hg19_v1_chr9_+_138371663 AB014549 NM_014811	273286	+	AY927868 DQ892784 DQ896031 NM_001048265 NM_144654	293364	-	TSC_hg19_v1_chr9_+_138392535 NM_016034 BC008017 BC013108 AB055388 AF151849	294149	+	AK290478|OLFM1|10439|olfactomedin 1##AK289921|OLFM1|10439|olfactomedin 1##BT007146|OLFM1|10439|olfactomedin 1##BC008763|OLFM1|10439|olfactomedin 1##BC011741|OLFM1|10439|olfactomedin 1##AK289719|OLFM1|10439|olfactomedin 1##AB014549|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##NM_014811|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##AY927868|C9orf116|138162|chromosome 9 open reading frame 116##DQ892784|C9orf116|138162|chromosome 9 open reading frame 116##DQ896031|C9orf116|138162|chromosome 9 open reading frame 116##NM_001048265|C9orf116|138162|chromosome 9 open reading frame 116##NM_144654|C9orf116|138162|chromosome 9 open reading frame 116##NM_016034|MRPS2|51116|mitochondrial ribosomal protein S2##BC008017|MRPS2|51116|mitochondrial ribosomal protein S2##BC013108|MRPS2|51116|mitochondrial ribosomal protein S2##AB055388|MRPS2|51116|mitochondrial ribosomal protein S2##AF151849|MRPS2|51116|mitochondrial ribosomal protein S2	0.0	
chr11	120474152	120474276	reg1036778.p2	3.902	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-91749	+	BC063117 NM_001198665 NM_015313	-266597	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	-267110	+	AB384776 NM_014619 S67803	56813	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	420596	+	NM_005422	499160	+	AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha	0.0	
chr12	121734888	121734993	reg1030219.p1	3.902	+	TSC_hg19_v1_chr12_-_121734549 NM_172226	-315	-	TSC_hg19_v1_chr12_-_121734513 BC026060 AF140507 AF425668 AK300865	-433	-	AF101264 TSC_hg19_v1_chr12_-_121712132 AK024748	-22879	-	TSC_hg19_v1_chr12_-_121735623 AK292072	655	-	AF287630 AF287631 NM_006549 NM_153499 NM_153500 NM_172214 NM_172215 NM_172216	1170	-	BC034243 TSC_hg19_v1_chr12_-_121785683	50727	-	NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF101264|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK024748|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK292072|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF287630|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF287631|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_006549|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_153499|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_153500|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172214|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172215|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172216|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##BC034243|ANAPC5|51433|anaphase promoting complex subunit 5	0.051583	
chr12	122332730	122332840	reg1038330.p1	3.902	+	TSC_hg19_v1_chr12_+_122326731 AB003177 NM_002813 AK315389 BC002383 BC004184 BC004213 DQ893594 EU831432 EU831524 AB528684	-6090	+	AK057510 NM_001171993	-6269	-	CU692906 DQ892664 DQ896049 BC024287 BC014790 X72389 TSC_hg19_v1_chr12_-_122296766 AK290826 NM_002150	-36092	-	TSC_hg19_v1_chr12_+_122356497 NM_001178003 NM_144668 BC028421 BC036233	23696	+	AK296159 TSC_hg19_v1_chr12_+_122459903 NM_001024808 NM_020993 AK316486 BC113627 BC094723 HQ258124 AB590498	127108	+	TSC_hg19_v1_chr12_+_122516655 BC151841 NM_014938	183822	+	NM_002813|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK315389|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC002383|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004184|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004213|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##DQ893594|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831432|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831524|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK057510|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_001171993|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_001178003|WDR66|144406|WD repeat domain 66##NM_144668|WDR66|144406|WD repeat domain 66##BC028421|WDR66|144406|WD repeat domain 66##BC036233|WDR66|144406|WD repeat domain 66##AK296159|BCL7A|605|B-cell CLL/lymphoma 7A##NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A##NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A##AK316486|BCL7A|605|B-cell CLL/lymphoma 7A##BC113627|BCL7A|605|B-cell CLL/lymphoma 7A##BC094723|BCL7A|605|B-cell CLL/lymphoma 7A##HQ258124|BCL7A|605|B-cell CLL/lymphoma 7A##BC151841|MLXIP|22877|MLX interacting protein##NM_014938|MLXIP|22877|MLX interacting protein	0.092581	
chr1	28655294	28655360	reg1034001.p1	3.902	+	TSC_hg19_v1_chr1_+_28586034 NM_031459 BC013304 AY123223 BC033719 AL136551 AK315710 DQ892827 DQ896073 EU831582 EU831667 AB529110 CU680558	-69169	+	TSC_hg19_v1_chr1_+_28562634 NM_016311 NM_178190 NM_178191 AK316600 BC009677 AK000934 AB029042 BT009849 CR457097 EU832478 EU832558 BC017562 BC004955	-92678	+	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	-95796	-	NM_001127350 NM_017638 AK296130 AK000052 AB107222 BC002694 TSC_hg19_v1_chr1_+_28655576	220	+	TSC_hg19_v1_chr1_+_28696251 NM_001048183 CR749449 AK025436 BC029266 BC016152 BC068508	40898	+	NM_023923 BC021247	109343	+	NM_031459|SESN2|83667|sestrin 2##BC013304|SESN2|83667|sestrin 2##AY123223|SESN2|83667|sestrin 2##BC033719|SESN2|83667|sestrin 2##AL136551|SESN2|83667|sestrin 2##AK315710|SESN2|83667|sestrin 2##DQ892827|SESN2|83667|sestrin 2##DQ896073|SESN2|83667|sestrin 2##EU831582|SESN2|83667|sestrin 2##EU831667|SESN2|83667|sestrin 2##NM_016311|ATPIF1|93974|ATPase inhibitory factor 1##NM_178190|ATPIF1|93974|ATPase inhibitory factor 1##NM_178191|ATPIF1|93974|ATPase inhibitory factor 1##AK316600|ATPIF1|93974|ATPase inhibitory factor 1##BC009677|ATPIF1|93974|ATPase inhibitory factor 1##AK000934|ATPIF1|93974|ATPase inhibitory factor 1##AB029042|ATPIF1|93974|ATPase inhibitory factor 1##BT009849|ATPIF1|93974|ATPase inhibitory factor 1##CR457097|ATPIF1|93974|ATPase inhibitory factor 1##EU832478|ATPIF1|93974|ATPase inhibitory factor 1##EU832558|ATPIF1|93974|ATPase inhibitory factor 1##BC017562|ATPIF1|93974|ATPase inhibitory factor 1##BC004955|ATPIF1|93974|ATPase inhibitory factor 1##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_001127350|MED18|54797|mediator complex subunit 18##NM_017638|MED18|54797|mediator complex subunit 18##AK296130|MED18|54797|mediator complex subunit 18##AK000052|MED18|54797|mediator complex subunit 18##AB107222|MED18|54797|mediator complex subunit 18##BC002694|MED18|54797|mediator complex subunit 18##NM_001048183|PHACTR4|65979|phosphatase and actin regulator 4##CR749449|PHACTR4|65979|phosphatase and actin regulator 4##AK025436|PHACTR4|65979|phosphatase and actin regulator 4##BC029266|PHACTR4|65979|phosphatase and actin regulator 4##BC016152|PHACTR4|65979|phosphatase and actin regulator 4##BC068508|PHACTR4|65979|phosphatase and actin regulator 4##NM_023923|PHACTR4|65979|phosphatase and actin regulator 4##BC021247|PHACTR4|65979|phosphatase and actin regulator 4	0.0	
chr2	186473657	186473752	reg1039452.p2	3.902	+	BC136602 TSC_hg19_v1_chr2_+_185463544	-1010212	+	BC142612 TSC_hg19_v1_chr2_+_185463319	-1010399	+	BC150198 TSC_hg19_v1_chr2_+_185463252 AK131402	-1010461	+	NM_173651	129650	+	TSC_hg19_v1_chr2_+_187350986 AF220184 NM_018471 AK298615 AK001901 AK297658 AF289586	877226	+	TSC_hg19_v1_chr2_+_187351010 BC012336 AF161421 AF109366	877306	+	BC136602|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A##BC150198|ZNF804A|91752|zinc finger protein 804A##AK131402|ZNF804A|91752|zinc finger protein 804A##NM_173651|FSIP2|401024|fibrous sheath interacting protein 2##AF220184|ZC3H15|55854|zinc finger CCCH-type containing 15##NM_018471|ZC3H15|55854|zinc finger CCCH-type containing 15##AK298615|ZC3H15|55854|zinc finger CCCH-type containing 15##AK001901|ZC3H15|55854|zinc finger CCCH-type containing 15##AK297658|ZC3H15|55854|zinc finger CCCH-type containing 15##AF289586|ZC3H15|55854|zinc finger CCCH-type containing 15##BC012336|ZC3H15|55854|zinc finger CCCH-type containing 15##AF161421|ZC3H15|55854|zinc finger CCCH-type containing 15##AF109366|ZC3H15|55854|zinc finger CCCH-type containing 15	0.101658	
chr3	137128568	137128675	reg1039861.p1	3.902	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-451791	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-479284	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	-547529	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	354526	+	AK098474 NM_001002026 AF349452	589058	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	600382	+	AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18	0.854586	CTCF.p2:-3:0.780
chr3	192534345	192534526	reg1008457.p2	3.902	+	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	-89070	-	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-407592	-	AY858112 NM_001083308	-1355484	+	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	101201	-	BC036194 BC045582 NM_178496	101506	-	TSC_hg19_v1_chr3_+_192958897 BC048095 NM_020386	424469	+	AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2##BC048095|HRASLS|57110|HRAS-like suppressor##NM_020386|HRASLS|57110|HRAS-like suppressor	0.0	
chr5	1485415	1485552	reg1023640.p2	3.902	+	S46955 EF174603 M95167 NM_001044	-39957	-	AB045223 DQ892147 DQ895343 AK027306 BC025305 NM_030782 TSC_hg19_v1_chr5_-_1345095	-140461	-	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	-190392	-	CU676500 BC020166 AK090444 TSC_hg19_v1_chr5_-_1494996	9451	-	TSC_hg19_v1_chr5_-_1523908 AB244719 AB463849	38451	-	TSC_hg19_v1_chr5_-_1524086 NM_024830	38579	-	S46955|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##EF174603|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##M95167|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##NM_001044|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##AB045223|CLPTM1L|81037|CLPTM1-like##DQ892147|CLPTM1L|81037|CLPTM1-like##DQ895343|CLPTM1L|81037|CLPTM1-like##AK027306|CLPTM1L|81037|CLPTM1-like##BC025305|CLPTM1L|81037|CLPTM1-like##NM_030782|CLPTM1L|81037|CLPTM1-like##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase##BC020166|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AK090444|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AB244719|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##NM_024830|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1	0.0	
chr6	109509298	109509436	reg1003671.p2	3.902	+	BC033448 NM_173830	-58861	+	TSC_hg19_v1_chr6_+_109416697 AK092723 AX747690 AK289910	-92650	+	NM_001083535 BC064365	-93010	+	AK310854 TSC_hg19_v1_chr6_-_109702904	193537	-	TSC_hg19_v1_chr6_-_109703588 AF106518 AF263279 AF299341 DQ891034 DQ894213	194208	-	TSC_hg19_v1_chr6_-_109703614 AK315908 AK298684 AK303525	194241	-	BC033448|CEP57L1|285753|centrosomal protein 57kDa-like 1##NM_173830|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK092723|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK289910|CEP57L1|285753|centrosomal protein 57kDa-like 1##NM_001083535|CEP57L1|285753|centrosomal protein 57kDa-like 1##BC064365|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK310854|CD164|8763|CD164 molecule, sialomucin##AF106518|CD164|8763|CD164 molecule, sialomucin##AF263279|CD164|8763|CD164 molecule, sialomucin##AF299341|CD164|8763|CD164 molecule, sialomucin##DQ891034|CD164|8763|CD164 molecule, sialomucin##DQ894213|CD164|8763|CD164 molecule, sialomucin##AK315908|CD164|8763|CD164 molecule, sialomucin##AK298684|CD164|8763|CD164 molecule, sialomucin##AK303525|CD164|8763|CD164 molecule, sialomucin	0.0	
chrX	3035823	3035928	reg1032079.p1	3.902	+	NM_004042 X97868	-51019	+	BC022389 NM_001201539	-76364	+	NM_001201538	-77601	+	BC011846 BC064986 BC080586 NM_015419 TSC_hg19_v1_chrX_-_3264691	228812	-	EU832357 EU832442 TSC_hg19_v1_chrX_-_3631397	595492	-	TSC_hg19_v1_chrX_-_3631619 BC041073	595667	-	NM_004042|ARSF|416|arylsulfatase F##X97868|ARSF|416|arylsulfatase F##BC022389|ARSF|416|arylsulfatase F##NM_001201539|ARSF|416|arylsulfatase F##NM_001201538|ARSF|416|arylsulfatase F##BC011846|MXRA5|25878|matrix-remodelling associated 5##BC064986|MXRA5|25878|matrix-remodelling associated 5##BC080586|MXRA5|25878|matrix-remodelling associated 5##NM_015419|MXRA5|25878|matrix-remodelling associated 5##EU832357|PRKX|5613|protein kinase, X-linked##EU832442|PRKX|5613|protein kinase, X-linked##BC041073|PRKX|5613|protein kinase, X-linked	0.360442	CTCF.p2:6:0.360
chr11	94276757	94276866	reg1032610.p1	3.901	+	NM_001190462	-31117	+	TSC_hg19_v1_chr11_+_94227168 NM_017704 AF025354 AK000196 BC017798 AK000448 AL833977	-49653	+	U37359 TSC_hg19_v1_chr11_-_94227011 BC017823 BC005241 AK095388 AF022778 AK308318 NM_005590 NM_005591	-49838	-	AK293616 NM_002033 TSC_hg19_v1_chr11_+_94277086 M58597 BC136373 BC136374	268	+	TSC_hg19_v1_chr11_+_94277605 M58596	788	+	NM_152431 AB079366 AK093475 AX748151 BC031060 DQ891240 DQ894425 AB590313 CU689100	23767	+	NM_001190462|LOC643037|643037|uncharacterized LOC643037##NM_017704|ANKRD49|54851|ankyrin repeat domain 49##AF025354|ANKRD49|54851|ankyrin repeat domain 49##AK000196|ANKRD49|54851|ankyrin repeat domain 49##BC017798|ANKRD49|54851|ankyrin repeat domain 49##AK000448|ANKRD49|54851|ankyrin repeat domain 49##AL833977|ANKRD49|54851|ankyrin repeat domain 49##U37359|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC017823|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC005241|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK095388|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AF022778|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK308318|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005590|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005591|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK293616|PIWIL4|143689|piwi-like 4 (Drosophila)##NM_002033|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58597|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136373|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136374|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)##AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)##AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)##BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)	0.0	
chr12	120548374	120548504	reg1028875.p1	3.901	+	TSC_hg19_v1_chr12_+_120427616 AK129960 NM_207311 U88834	-120841	+	TSC_hg19_v1_chr12_-_120315112 AY209000 AY257469 BC008127 AY681966 NM_001206999 NM_007174	-233346	-	AK123136 TSC_hg19_v1_chr12_-_120241305	-307142	-	AF498960 BT020024 CR536486 CR541683 CU677517 DQ890586 DQ890603 DQ893750 AB528529 TSC_hg19_v1_chr12_-_120554547 X79781 AK304620	6062	-	TSC_hg19_v1_chr12_-_120554551 AK312538	6114	-	BC015931 TSC_hg19_v1_chr12_-_120554557	6118	-	AK129960|CCDC64|92558|coiled-coil domain containing 64##NM_207311|CCDC64|92558|coiled-coil domain containing 64##U88834|CCDC64|92558|coiled-coil domain containing 64##AY209000|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY257469|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##BC008127|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AY681966|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_001206999|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##NM_007174|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AK123136|CIT|11113|citron (rho-interacting, serine/threonine kinase 21)##AF498960|RAB35|11021|RAB35, member RAS oncogene family##BT020024|RAB35|11021|RAB35, member RAS oncogene family##CR536486|RAB35|11021|RAB35, member RAS oncogene family##CR541683|RAB35|11021|RAB35, member RAS oncogene family##DQ890586|RAB35|11021|RAB35, member RAS oncogene family##DQ890603|RAB35|11021|RAB35, member RAS oncogene family##DQ893750|RAB35|11021|RAB35, member RAS oncogene family##X79781|RAB35|11021|RAB35, member RAS oncogene family##AK304620|RAB35|11021|RAB35, member RAS oncogene family##AK312538|RAB35|11021|RAB35, member RAS oncogene family##BC015931|RAB35|11021|RAB35, member RAS oncogene family	0.0	
chr2	206585823	206586004	reg1034048.p1	3.901	+	TSC_hg19_v1_chr2_+_206547371 AK290934	-38552	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	-38735	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-1175194	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	364998	-	AK295987 NM_001199984	438004	-	X61100 AK098395 BC018900 BC022368 TSC_hg19_v1_chr2_-_207024145 AK300585 BC030833 AK295705 AK295966 AK298320 BC004133 NM_001199981 NM_001199982 NM_001199983 NM_005006	438259	-	AK290934|NRP2|8828|neuropilin 2##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D##AK295987|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199984|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)	0.0	
chr2	9126913	9127011	reg1037582.p1	3.901	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	-149243	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-304759	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-2069375	+	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	16859	-	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	219930	+	TSC_hg19_v1_chr2_+_9346940 BC063308	219997	+	BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##BC063308|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	0.0	
chr8	54812537	54812717	reg1030862.p2	3.901	+	TSC_hg19_v1_chr8_+_54793579 AF060877 HQ257937 BC015614	-19065	+	TSC_hg19_v1_chr8_+_54793431 AK094503 BC063490 NM_003702 BC054867 BC018618 BC031328	-19175	+	AY046538 NM_170587 AF366054 AF366055 AF366056	-48214	+	BT019995 CR542221 AB464783 AK290454 TSC_hg19_v1_chr8_-_54934848 X62585 BC072460 X57198 AK026617 AK297957 BX538034 AK297729	122140	-	TSC_hg19_v1_chr8_-_54934851 M81601	122227	-	TSC_hg19_v1_chr8_-_54934990 NM_006756 NM_201437	122392	-	AF060877|RGS20|8601|regulator of G-protein signaling 20##HQ257937|RGS20|8601|regulator of G-protein signaling 20##BC015614|RGS20|8601|regulator of G-protein signaling 20##AK094503|RGS20|8601|regulator of G-protein signaling 20##BC063490|RGS20|8601|regulator of G-protein signaling 20##NM_003702|RGS20|8601|regulator of G-protein signaling 20##BC018618|RGS20|8601|regulator of G-protein signaling 20##BC031328|RGS20|8601|regulator of G-protein signaling 20##AY046538|RGS20|8601|regulator of G-protein signaling 20##NM_170587|RGS20|8601|regulator of G-protein signaling 20##AF366054|RGS20|8601|regulator of G-protein signaling 20##AF366055|RGS20|8601|regulator of G-protein signaling 20##AF366056|RGS20|8601|regulator of G-protein signaling 20##BT019995|TCEA1|6917|transcription elongation factor A (SII), 1##CR542221|TCEA1|6917|transcription elongation factor A (SII), 1##AK290454|TCEA1|6917|transcription elongation factor A (SII), 1##X62585|TCEA1|6917|transcription elongation factor A (SII), 1##BC072460|TCEA1|6917|transcription elongation factor A (SII), 1##X57198|TCEA1|6917|transcription elongation factor A (SII), 1##AK026617|TCEA1|6917|transcription elongation factor A (SII), 1##AK297957|TCEA1|6917|transcription elongation factor A (SII), 1##BX538034|TCEA1|6917|transcription elongation factor A (SII), 1##AK297729|TCEA1|6917|transcription elongation factor A (SII), 1##M81601|TCEA1|6917|transcription elongation factor A (SII), 1##NM_006756|TCEA1|6917|transcription elongation factor A (SII), 1##NM_201437|TCEA1|6917|transcription elongation factor A (SII), 1	0.0	
chrX	148828199	148828317	reg1024854.p1	3.901	+	NM_005366 AY747607 BC004479	-34489	+	AK127849 NM_001011544	-58356	+	AK097391 AK096308 AK297335 TSC_hg19_v1_chrX_-_148713449 NM_001174092 NM_032508 AF530473	-114775	-	NM_001164415 NM_016153	27467	+	AK292272 AK313321 NM_001080790 BC002351 NM_005365	35337	+	AK313943 NM_001166400 NM_001166401 NM_005364 BC002455 BC012744	181712	+	NM_005366|MAGEA11|4110|melanoma antigen family A, 11##AY747607|MAGEA11|4110|melanoma antigen family A, 11##BC004479|MAGEA11|4110|melanoma antigen family A, 11##AK127849|MAGEA11|4110|melanoma antigen family A, 11##NM_001011544|MAGEA11|4110|melanoma antigen family A, 11##AK097391|TMEM185A|84548|transmembrane protein 185A##AK096308|TMEM185A|84548|transmembrane protein 185A##AK297335|TMEM185A|84548|transmembrane protein 185A##NM_001174092|TMEM185A|84548|transmembrane protein 185A##NM_032508|TMEM185A|84548|transmembrane protein 185A##AF530473|TMEM185A|84548|transmembrane protein 185A##NM_001164415|HSFX2|100130086|heat shock transcription factor family, X linked 2##NM_016153|HSFX1|100506164|heat shock transcription factor family, X linked 1##AK292272|MAGEA9|4108|melanoma antigen family A, 9##AK313321|MAGEA9|4108|melanoma antigen family A, 9##NM_001080790|MAGEA9B|728269|melanoma antigen family A, 9B##BC002351|MAGEA9|4108|melanoma antigen family A, 9##NM_005365|MAGEA9|4108|melanoma antigen family A, 9##AK313943|MAGEA8|4107|melanoma antigen family A, 8##NM_001166400|MAGEA8|4107|melanoma antigen family A, 8##NM_001166401|MAGEA8|4107|melanoma antigen family A, 8##NM_005364|MAGEA8|4107|melanoma antigen family A, 8##BC002455|MAGEA8|4107|melanoma antigen family A, 8##BC012744|MAGEA8|4107|melanoma antigen family A, 8	0.361038	CTCF.p2:14:0.361
chr12	48031069	48031189	reg1034760.p1	3.900	+	TSC_hg19_v1_chr12_+_47610379 BC016154 AK307166	-420798	+	BC008360 NM_138371	-421078	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	-557546	-	TSC_hg19_v1_chr12_-_48099790 BC056415 AK025561 AK299465	68638	-	TSC_hg19_v1_chr12_-_48099814 BC003680	68685	-	TSC_hg19_v1_chr12_-_48099819 NM_001146075 NM_001146076 NM_024604	68702	-	BC016154|FAM113B|91523|family with sequence similarity 113, member B##BC008360|FAM113B|91523|family with sequence similarity 113, member B##NM_138371|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC056415|RPAP3|79657|RNA polymerase II associated protein 3##AK025561|RPAP3|79657|RNA polymerase II associated protein 3##AK299465|RPAP3|79657|RNA polymerase II associated protein 3##BC003680|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146075|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146076|RPAP3|79657|RNA polymerase II associated protein 3##NM_024604|RPAP3|79657|RNA polymerase II associated protein 3	1.093026	CTCF.p2:18:0.988
chr12	6981645	6981783	reg1038025.p2	3.900	+	BC015100 BC070129 D28460 TSC_hg19_v1_chr12_+_6976694 AK129488 AK300661 AK313282 BC007086 BC017917 AK222638 BC009329 BC011611 BC007812 AB590181 DQ893249 DQ896578 CR541702	-5002	+	NM_001159287 TSC_hg19_v1_chr12_+_6976693 NM_000365	-5076	+	TSC_hg19_v1_chr12_+_6961334 U35116 CU678786 AB384820 DQ893030 DQ896274	-20385	+	BC071933 NM_001146316 BC002983 AK297963 AK310353 NM_032641	770	-	AK292367 NM_001135217 NM_006992 NM_201650 U72508 U72509 U72510 BC014450 AK292291 AK223535	32302	+	AK290525 NM_001975 TSC_hg19_v1_chr12_+_7023743 AK312402 AK295220 BC002745 M22349	41911	+	BC015100|TPI1|7167|triosephosphate isomerase 1##BC070129|TPI1|7167|triosephosphate isomerase 1##D28460|TPI1|7167|triosephosphate isomerase 1##AK129488|TPI1|7167|triosephosphate isomerase 1##AK300661|TPI1|7167|triosephosphate isomerase 1##AK313282|TPI1|7167|triosephosphate isomerase 1##BC007086|TPI1|7167|triosephosphate isomerase 1##BC017917|TPI1|7167|triosephosphate isomerase 1##AK222638|TPI1|7167|triosephosphate isomerase 1##BC009329|TPI1|7167|triosephosphate isomerase 1##BC011611|TPI1|7167|triosephosphate isomerase 1##BC007812|TPI1|7167|triosephosphate isomerase 1##DQ893249|TPI1|7167|triosephosphate isomerase 1##DQ896578|TPI1|7167|triosephosphate isomerase 1##CR541702|TPI1|7167|triosephosphate isomerase 1##NM_001159287|TPI1|7167|triosephosphate isomerase 1##NM_000365|TPI1|7167|triosephosphate isomerase 1##U35116|USP5|8078|ubiquitin specific peptidase 5 (isopeptidase T)##DQ893030|USP5|8078|ubiquitin specific peptidase 5 (isopeptidase T)##DQ896274|USP5|8078|ubiquitin specific peptidase 5 (isopeptidase T)##BC071933|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##NM_001146316|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##BC002983|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##AK297963|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##AK310353|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##NM_032641|SPSB2|84727|splA/ryanodine receptor domain and SOCS box containing 2##AK292367|LRRC23|10233|leucine rich repeat containing 23##NM_001135217|LRRC23|10233|leucine rich repeat containing 23##NM_006992|LRRC23|10233|leucine rich repeat containing 23##NM_201650|LRRC23|10233|leucine rich repeat containing 23##U72508|LRRC23|10233|leucine rich repeat containing 23##U72509|LRRC23|10233|leucine rich repeat containing 23##U72510|LRRC23|10233|leucine rich repeat containing 23##BC014450|LRRC23|10233|leucine rich repeat containing 23##AK292291|LRRC23|10233|leucine rich repeat containing 23##AK223535|LRRC23|10233|leucine rich repeat containing 23##AK290525|ENO2|2026|enolase 2 (gamma, neuronal)##NM_001975|ENO2|2026|enolase 2 (gamma, neuronal)##AK312402|ENO2|2026|enolase 2 (gamma, neuronal)##AK295220|ENO2|2026|enolase 2 (gamma, neuronal)##BC002745|ENO2|2026|enolase 2 (gamma, neuronal)##M22349|ENO2|2026|enolase 2 (gamma, neuronal)	0.013554	
chr14	95830108	95830247	reg1033814.p1	3.900	+	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	-43994	-	TSC_hg19_v1_chr14_+_95624023 BC040596	-206156	+	TSC_hg19_v1_chr14_-_95623867 BC046934 AB023145 BC150287 NM_177438	-206385	-	AK131436 BC146604 BX248076 NM_152592	111927	-	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	170838	-	TSC_hg19_v1_chr14_+_96001352 NM_016417	171149	+	AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC046934|DICER1|23405|dicer 1, ribonuclease type III##AB023145|DICER1|23405|dicer 1, ribonuclease type III##BC150287|DICER1|23405|dicer 1, ribonuclease type III##NM_177438|DICER1|23405|dicer 1, ribonuclease type III##AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##NM_016417|GLRX5|51218|glutaredoxin 5	0.0	
chr14	96530984	96531154	reg1031045.p1	3.900	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	-25423	+	AK023027 TSC_hg19_v1_chr14_+_96342762	-188324	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-350602	-	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	140008	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	140127	+	AK291970 AK309528 NM_000710 TSC_hg19_v1_chr14_+_96722546 U30271 AJ238044	191485	+	NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##AK023027|LOC100507043|100507043|uncharacterized LOC100507043##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2##AK291970|BDKRB1|623|bradykinin receptor B1##AK309528|BDKRB1|623|bradykinin receptor B1##NM_000710|BDKRB1|623|bradykinin receptor B1##U30271|BDKRB1|623|bradykinin receptor B1##AJ238044|BDKRB1|623|bradykinin receptor B1	0.0	
chr15	64275366	64275502	reg1013817.p1	3.900	+	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-149294	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-149314	-	TSC_hg19_v1_chr15_-_64126081 U50078	-149350	-	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	63176	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	110663	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	112706	+	AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1	0.0	
chr17	37331151	37331270	reg1014654.p1	3.900	+	NM_001143968	-8797	-	TSC_hg19_v1_chr17_+_37321318 AK093715	-9889	+	TSC_hg19_v1_chr17_-_37307891 NM_020405	-23315	-	TSC_hg19_v1_chr17_-_37350083 AB209176	18883	-	CU691480 DQ891688 EU176608 AY393857 L06111 L06112 M76560 TSC_hg19_v1_chr17_-_37353923 BC037311 AB054985 M92301 M92302 M92303 AK289729 AK297643 AK312385 NM_000723 NM_199247 NM_199248	22645	-	BC095445 NM_000981 TSC_hg19_v1_chr17_+_37356569 AB055766 BC066315 AK130962 AK311858 X63527	25342	+	NM_001143968|ARL5C|390790|ADP-ribosylation factor-like 5C##AK093715|LOC284108|284108|uncharacterized LOC284108##NM_020405|PLXDC1|57125|plexin domain containing 1##AB209176|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##DQ891688|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##EU176608|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##AY393857|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##L06111|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##L06112|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##M76560|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##BC037311|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##AB054985|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##M92301|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##M92302|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##M92303|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##AK289729|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##AK297643|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##AK312385|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##NM_000723|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##NM_199247|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##NM_199248|CACNB1|782|calcium channel, voltage-dependent, beta 1 subunit##BC095445|RPL19|6143|ribosomal protein L19##NM_000981|RPL19|6143|ribosomal protein L19##AB055766|RPL19|6143|ribosomal protein L19##BC066315|RPL19|6143|ribosomal protein L19##AK130962|RPL19|6143|ribosomal protein L19##AK311858|RPL19|6143|ribosomal protein L19##X63527|RPL19|6143|ribosomal protein L19	0.0	
chr18	71829717	71829793	reg1035195.p2	3.900	+	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	-13961	+	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	-14728	-	AF448838 BC050329 NM_001201465 NM_138966	-1294946	-	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	129424	-	CR749350 NM_001174123	153354	+	TSC_hg19_v1_chr18_-_72124545 NM_001044369	294774	-	NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15##AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)##CR749350|C18orf63|644041|chromosome 18 open reading frame 63##NM_001174123|C18orf63|644041|chromosome 18 open reading frame 63##NM_001044369|FAM69C|125704|family with sequence similarity 69, member C	0.07302	
chr2	114384713	114384838	reg1038087.p2	3.900	+	TSC_hg19_v1_chr2_-_114384648 BC000596 BC105600	-127	-	BC027921 TSC_hg19_v1_chr2_+_114341690	-43076	+	AK292759 AK309926 TSC_hg19_v1_chr2_+_114341689	-43086	+	TSC_hg19_v1_chr2_+_114384811 BC111008 NM_007082 NM_013412	39	+	TSC_hg19_v1_chr2_+_114384849 AK289496 AF095350 AF095351 BC126129 BC144050 BC144052	131	+	AF529364 CU676258 TSC_hg19_v1_chr2_-_114514079 AY358620	129303	-	BC000596|RPL23AP7|118433|ribosomal protein L23a pseudogene 7##BC105600|RPL23AP7|118433|ribosomal protein L23a pseudogene 7##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK292759|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC111008|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##NM_007082|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##NM_013412|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AK289496|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095350|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095351|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC126129|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144050|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144052|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF529364|SLC35F5|80255|solute carrier family 35, member F5##AY358620|SLC35F5|80255|solute carrier family 35, member F5	0.0	
chr22	30686314	30686495	reg1032115.p2	3.900	+	CU013000 CU013288 CU692418 AB528172 BC021927 AK309436 AK055587 TSC_hg19_v1_chr22_-_30685566 CR456449 AK310246 NM_001037666	-854	-	CR541703 AB463155 CU013134 CU013422 DQ892537 DQ895748 CR456534 BC011589 NM_020530 TSC_hg19_v1_chr22_-_30662841	-23589	-	AB527710 X13967 BC093733 BC093735 BC143305 BC069540 TSC_hg19_v1_chr22_-_30642749 AK315310 NM_002309	-43665	-	TSC_hg19_v1_chr22_-_30722928 AB449894 AB590468 BC143051 BC143052 BC150187 CT841514 BC150214 AK127939 AF331038 BC022201 BC136815 BC171775 AK074656 BC142940 NM_001204240 NM_031937	36523	-	TSC_hg19_v1_chr22_+_30752612 BC018040 NM_001017437	66215	+	TSC_hg19_v1_chr22_-_30752874 AB463284 CU013174 CU013462 DQ892687 DQ895931 BC001976 X85237 CR456575	66408	-	CU013000|GATSL3|652968|GATS protein-like 3##CU013288|GATSL3|652968|GATS protein-like 3##BC021927|GATSL3|652968|GATS protein-like 3##AK309436|GATSL3|652968|GATS protein-like 3##AK055587|GATSL3|652968|GATS protein-like 3##CR456449|GATSL3|652968|GATS protein-like 3##AK310246|GATSL3|652968|GATS protein-like 3##NM_001037666|GATSL3|652968|GATS protein-like 3##CR541703|OSM|5008|oncostatin M##CU013134|OSM|5008|oncostatin M##CU013422|OSM|5008|oncostatin M##DQ892537|OSM|5008|oncostatin M##DQ895748|OSM|5008|oncostatin M##CR456534|OSM|5008|oncostatin M##BC011589|OSM|5008|oncostatin M##NM_020530|OSM|5008|oncostatin M##X13967|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093733|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093735|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC143305|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC069540|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AK315310|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##NM_002309|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AB449894|TBC1D10A|83874|TBC1 domain family, member 10A##BC143051|TBC1D10A|83874|TBC1 domain family, member 10A##BC143052|TBC1D10A|83874|TBC1 domain family, member 10A##BC150187|TBC1D10A|83874|TBC1 domain family, member 10A##CT841514|TBC1D10A|83874|TBC1 domain family, member 10A##BC150214|TBC1D10A|83874|TBC1 domain family, member 10A##AK127939|TBC1D10A|83874|TBC1 domain family, member 10A##AF331038|TBC1D10A|83874|TBC1 domain family, member 10A##BC022201|TBC1D10A|83874|TBC1 domain family, member 10A##BC136815|TBC1D10A|83874|TBC1 domain family, member 10A##BC171775|TBC1D10A|83874|TBC1 domain family, member 10A##AK074656|TBC1D10A|83874|TBC1 domain family, member 10A##BC142940|TBC1D10A|83874|TBC1 domain family, member 10A##NM_001204240|TBC1D10A|83874|TBC1 domain family, member 10A##NM_031937|TBC1D10A|83874|TBC1 domain family, member 10A##BC018040|CCDC157|550631|coiled-coil domain containing 157##NM_001017437|CCDC157|550631|coiled-coil domain containing 157##CU013174|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CU013462|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##DQ892687|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##DQ895931|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##BC001976|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##X85237|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CR456575|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa	0.0	
chr5	117942768	117942852	reg1039287.p1	3.900	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-2032296	-	TSC_hg19_v1_chr5_+_115898220 D28352	-2044586	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-2522089	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	381428	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	464001	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	464355	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0622	
chr5	122881369	122881476	reg1035913.p2	3.900	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-33540	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-122278	-	NM_001136239 AK297992 AF272898 AF272899	-456578	+	BC131507 AB033107 BC151226 NM_020747	1199366	-	NM_001146319 AK316288 AK300154	2814392	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	2877421	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.22141	CTCF.p2:-11:0.221
chr5	180145859	180145952	reg1034226.p1	3.900	+	TSC_hg19_v1_chr5_-_180076616 NM_002020 NM_182925	-69281	-	AK291679 AK309910 TSC_hg19_v1_chr5_-_180076601	-69303	-	TSC_hg19_v1_chr5_-_180076572 U43143	-69332	-	NM_001001657 BC140756	21172	-	M55621 TSC_hg19_v1_chr5_-_180229805 AK075429 AK090523	83859	-	NM_002406	84142	-	NM_002020|FLT4|2324|fms-related tyrosine kinase 4##NM_182925|FLT4|2324|fms-related tyrosine kinase 4##AK291679|FLT4|2324|fms-related tyrosine kinase 4##AK309910|FLT4|2324|fms-related tyrosine kinase 4##U43143|FLT4|2324|fms-related tyrosine kinase 4##NM_001001657|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1##BC140756|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1##M55621|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK075429|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK090523|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_002406|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	0.947422	CTCF.p2:1:0.947
chr6	143348085	143348265	reg1005485.p1	3.900	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	-81847	-	TSC_hg19_v1_chr6_+_142623443 BX640873	-724769	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-725106	+	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	33820	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	33861	+	TSC_hg19_v1_chr6_+_143382055 BC025278 CU692954 DQ893291 DQ896622 BX538067	33907	+	CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1##BC025278|AIG1|51390|androgen-induced 1##DQ893291|AIG1|51390|androgen-induced 1##DQ896622|AIG1|51390|androgen-induced 1##BX538067|AIG1|51390|androgen-induced 1	0.0	
chr11	107729741	107729897	reg1029691.p1	3.899	+	AK300582 TSC_hg19_v1_chr11_-_107729530 BC039195	-231	-	CU691672 TSC_hg19_v1_chr11_-_107729514 AK023080 BC048302	-314	-	BC104185 BC113930 BC113987 BC104150 BC094685 AK312097 BC005261 U96094 NM_003063	-147060	-	NM_017515	94	-	TSC_hg19_v1_chr11_+_107799171 AK292969 BC028064 NM_017516 X99962	69416	+	NM_003478 AK125294	149613	+	AK300582|SLC35F2|54733|solute carrier family 35, member F2##BC039195|SLC35F2|54733|solute carrier family 35, member F2##AK023080|SLC35F2|54733|solute carrier family 35, member F2##BC048302|SLC35F2|54733|solute carrier family 35, member F2##BC104185|SLN|6588|sarcolipin##BC113930|SLN|6588|sarcolipin##BC113987|SLN|6588|sarcolipin##BC104150|SLN|6588|sarcolipin##BC094685|SLN|6588|sarcolipin##AK312097|SLN|6588|sarcolipin##BC005261|SLN|6588|sarcolipin##U96094|SLN|6588|sarcolipin##NM_003063|SLN|6588|sarcolipin##NM_017515|SLC35F2|54733|solute carrier family 35, member F2##AK292969|RAB39A|54734|RAB39A, member RAS oncogene family##BC028064|RAB39A|54734|RAB39A, member RAS oncogene family##NM_017516|RAB39A|54734|RAB39A, member RAS oncogene family##X99962|RAB39A|54734|RAB39A, member RAS oncogene family##NM_003478|CUL5|8065|cullin 5##AK125294|CUL5|8065|cullin 5	0.0	
chr12	69058922	69059048	reg1039966.p1	3.899	+	TSC_hg19_v1_chr12_+_69004749 AF279894 X08004	-54205	+	AL080212 TSC_hg19_v1_chr12_+_69004740 AK311559 BC095467 AB062128 BC000176	-54260	+	AK301401 AK301428 TSC_hg19_v1_chr12_+_69004708	-54277	+	TSC_hg19_v1_chr12_+_69080760 AJ295745 NM_020401 AK055629 AK315157 AK094183 BC017167 BC043343	21778	+	TSC_hg19_v1_chr12_+_69139955 AK289645 AY358943 NM_018656	80951	+	TSC_hg19_v1_chr12_+_69139964 AF148713 BC030504 BC021103 BC049192 BC008412 CU688882	81072	+	AF279894|RAP1B|5908|RAP1B, member of RAS oncogene family##X08004|RAP1B|5908|RAP1B, member of RAS oncogene family##AL080212|RAP1B|5908|RAP1B, member of RAS oncogene family##AK311559|RAP1B|5908|RAP1B, member of RAS oncogene family##BC095467|RAP1B|5908|RAP1B, member of RAS oncogene family##AB062128|RAP1B|5908|RAP1B, member of RAS oncogene family##BC000176|RAP1B|5908|RAP1B, member of RAS oncogene family##AK301401|RAP1B|5908|RAP1B, member of RAS oncogene family##AK301428|RAP1B|5908|RAP1B, member of RAS oncogene family##AJ295745|NUP107|57122|nucleoporin 107kDa##NM_020401|NUP107|57122|nucleoporin 107kDa##AK055629|NUP107|57122|nucleoporin 107kDa##AK315157|NUP107|57122|nucleoporin 107kDa##AK094183|NUP107|57122|nucleoporin 107kDa##BC017167|NUP107|57122|nucleoporin 107kDa##BC043343|NUP107|57122|nucleoporin 107kDa##AK289645|SLC35E3|55508|solute carrier family 35, member E3##AY358943|SLC35E3|55508|solute carrier family 35, member E3##NM_018656|SLC35E3|55508|solute carrier family 35, member E3##AF148713|SLC35E3|55508|solute carrier family 35, member E3##BC030504|SLC35E3|55508|solute carrier family 35, member E3##BC021103|SLC35E3|55508|solute carrier family 35, member E3##BC049192|SLC35E3|55508|solute carrier family 35, member E3##BC008412|SLC35E3|55508|solute carrier family 35, member E3	0.0	
chr13	76054895	76055052	reg1029954.p2	3.899	+	CR749622 TSC_hg19_v1_chr13_-_75901948	-153051	-	TSC_hg19_v1_chr13_-_74708425 AK291397	-1346577	-	AF161471 AF113122 NM_007249	-1346984	-	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	1365	-	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	57005	-	TSC_hg19_v1_chr13_+_76123890 AK313665 BC018125 NM_006002 M30496 CU676190 BT019359 CR456855	68951	+	CR749622|TBC1D4|9882|TBC1 domain family, member 4##AK291397|KLF12|11278|Kruppel-like factor 12##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6##AK313665|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BC018125|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##NM_006002|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##M30496|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##BT019359|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)##CR456855|UCHL3|7347|ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)	0.029339	
chr2	59812234	59812324	reg1037389.p1	3.899	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-1343797	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-1538291	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-1538525	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	968243	-	AF080216 TSC_hg19_v1_chr2_-_60780784	968499	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	1171205	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.992175	CTCF.p2:0:0.992
chr2	63274631	63274718	reg1035285.p2	3.899	+	BC029477 NM_001142614	-340644	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	-341708	+	AK292545 NM_001142615	-373689	+	NM_001199770	2517	+	NM_014562 TSC_hg19_v1_chr2_+_63277964 AK095680 AK297308 BC007621	3291	+	TSC_hg19_v1_chr2_-_63815560 AK310290	540866	-	BC029477|EHBP1|23301|EH domain binding protein 1##NM_001142614|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##NM_001199770|OTX1|5013|orthodenticle homeobox 1##NM_014562|OTX1|5013|orthodenticle homeobox 1##AK095680|OTX1|5013|orthodenticle homeobox 1##AK297308|OTX1|5013|orthodenticle homeobox 1##BC007621|OTX1|5013|orthodenticle homeobox 1##AK310290|WDPCP|51057|WD repeat containing planar cell polarity effector	0.0	
chr3	38180161	38180239	reg1036174.p1	3.899	+	NM_001172566 NM_001172567 NM_001172568 NM_001172569 NM_002468 TSC_hg19_v1_chr3_+_38180156 AK296716 U84408 BX537602 AK298650 AK300448 AK296570 AK298666 AB463903 AK300051 BC013589 AL832906 AB446470 AK304676 BT007376	-116	+	TSC_hg19_v1_chr3_-_38178584 AK316551 AK301056 BC039837 BC000635 NM_001130410 NM_001607	-1544	-	TSC_hg19_v1_chr3_-_38178570 BC025780	-1628	-	TSC_hg19_v1_chr3_+_38206993 AB017642 NM_005109 BC008726	26841	+	TSC_hg19_v1_chr3_+_38207137 AK309634	26945	+	TSC_hg19_v1_chr3_+_38207257 AB029024 AB384561 CU679061 DQ893255 DQ896584	27106	+	NM_001172566|MYD88|4615|myeloid differentiation primary response gene (88)##NM_001172567|MYD88|4615|myeloid differentiation primary response gene (88)##NM_001172568|MYD88|4615|myeloid differentiation primary response gene (88)##NM_001172569|MYD88|4615|myeloid differentiation primary response gene (88)##NM_002468|MYD88|4615|myeloid differentiation primary response gene (88)##AK296716|MYD88|4615|myeloid differentiation primary response gene (88)##U84408|MYD88|4615|myeloid differentiation primary response gene (88)##BX537602|MYD88|4615|myeloid differentiation primary response gene (88)##AK298650|MYD88|4615|myeloid differentiation primary response gene (88)##AK300448|MYD88|4615|myeloid differentiation primary response gene (88)##AK296570|MYD88|4615|myeloid differentiation primary response gene (88)##AK298666|MYD88|4615|myeloid differentiation primary response gene (88)##AK300051|MYD88|4615|myeloid differentiation primary response gene (88)##BC013589|MYD88|4615|myeloid differentiation primary response gene (88)##AL832906|MYD88|4615|myeloid differentiation primary response gene (88)##AB446470|MYD88|4615|myeloid differentiation primary response gene (88)##AK304676|MYD88|4615|myeloid differentiation primary response gene (88)##BT007376|MYD88|4615|myeloid differentiation primary response gene (88)##AK316551|ACAA1|30|acetyl-CoA acyltransferase 1##AK301056|ACAA1|30|acetyl-CoA acyltransferase 1##BC039837|ACAA1|30|acetyl-CoA acyltransferase 1##BC000635|ACAA1|30|acetyl-CoA acyltransferase 1##NM_001130410|ACAA1|30|acetyl-CoA acyltransferase 1##NM_001607|ACAA1|30|acetyl-CoA acyltransferase 1##BC025780|ACAA1|30|acetyl-CoA acyltransferase 1##AB017642|OXSR1|9943|oxidative-stress responsive 1##NM_005109|OXSR1|9943|oxidative-stress responsive 1##BC008726|OXSR1|9943|oxidative-stress responsive 1##AK309634|OXSR1|9943|oxidative-stress responsive 1##AB029024|OXSR1|9943|oxidative-stress responsive 1##DQ893255|OXSR1|9943|oxidative-stress responsive 1##DQ896584|OXSR1|9943|oxidative-stress responsive 1	0.0	
chr6	83775572	83775667	reg1032678.p2	3.899	+	TSC_hg19_v1_chr6_-_83775541 BC101512 BC101538 BC143617 BC036049 AB126062 NM_198920 BC053645 AK298205 BC057845	-94	-	TSC_hg19_v1_chr6_+_83073996 AK074790 NM_001166392	-701642	+	TSC_hg19_v1_chr6_+_83073565 BC037161 AK074786	-702086	+	TSC_hg19_v1_chr6_+_83777389 BX648667 NM_001199942 NM_015018 AK094766	1778	+	AF102265 AB032081 AF180371 TSC_hg19_v1_chr6_-_83902977 AK314512 AK225363 AK001365 AK023432 BC001258 NM_001199918 NM_001199919 NM_015599	127353	-	NM_033411 TSC_hg19_v1_chr6_+_83903075 AK309249 AK295724 AK302978 AK313083	127478	+	BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AK074790|TPBG|7162|trophoblast glycoprotein##NM_001166392|TPBG|7162|trophoblast glycoprotein##BC037161|TPBG|7162|trophoblast glycoprotein##AK074786|TPBG|7162|trophoblast glycoprotein##BX648667|DOPEY1|23033|dopey family member 1##NM_001199942|DOPEY1|23033|dopey family member 1##NM_015018|DOPEY1|23033|dopey family member 1##AK094766|DOPEY1|23033|dopey family member 1##AF102265|PGM3|5238|phosphoglucomutase 3##AB032081|PGM3|5238|phosphoglucomutase 3##AF180371|PGM3|5238|phosphoglucomutase 3##AK314512|PGM3|5238|phosphoglucomutase 3##AK225363|PGM3|5238|phosphoglucomutase 3##AK001365|PGM3|5238|phosphoglucomutase 3##AK023432|PGM3|5238|phosphoglucomutase 3##BC001258|PGM3|5238|phosphoglucomutase 3##NM_001199918|PGM3|5238|phosphoglucomutase 3##NM_001199919|PGM3|5238|phosphoglucomutase 3##NM_015599|PGM3|5238|phosphoglucomutase 3##NM_033411|RWDD2A|112611|RWD domain containing 2A##AK309249|RWDD2A|112611|RWD domain containing 2A##AK295724|RWDD2A|112611|RWD domain containing 2A##AK302978|RWDD2A|112611|RWD domain containing 2A##AK313083|RWDD2A|112611|RWD domain containing 2A	0.996118	CTCF.p2:-13:0.996
chr8	131340406	131340578	reg1032712.p1	3.899	+	TSC_hg19_v1_chr8_-_131028933 AF208851 CR749628	-311609	-	TSC_hg19_v1_chr8_-_131028699 AK002059	-311798	-	BC016345 TSC_hg19_v1_chr8_-_131028667	-311833	-	TSC_hg19_v1_chr8_-_131456196 NM_001247996 NM_018482	115539	-	NM_001115	712342	-	TSC_hg19_v1_chr8_+_132916339 NM_015137 BC071611 BC152442 D63477	1575865	+	AF208851|FAM49B|51571|family with sequence similarity 49, member B##CR749628|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B##NM_001247996|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_018482|ASAP1|50807|ArfGAP with SH3 domain, ankyrin repeat and PH domain 1##NM_001115|ADCY8|114|adenylate cyclase 8 (brain)##NM_015137|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC071611|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##BC152442|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##D63477|EFR3A|23167|EFR3 homolog A (S. cerevisiae)	0.0	
chr11	95278392	95278530	reg1040663.p2	3.898	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	-314157	-	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-455449	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-478053	+	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	244190	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	244272	-	AK021591 TSC_hg19_v1_chr11_-_95522975 BC026013 NM_144664	244505	-	BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B##AK021591|FAM76B|143684|family with sequence similarity 76, member B##BC026013|FAM76B|143684|family with sequence similarity 76, member B##NM_144664|FAM76B|143684|family with sequence similarity 76, member B	0.015835	
chr13	29098184	29098345	reg1033668.p1	3.898	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	-29020	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	-385598	+	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	-423577	-	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	134944	+	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	135030	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	194791	-	BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3	0.0	
chr20	39318638	39318722	reg1002939.p1	3.898	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-803	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-1727691	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-1763612	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	338814	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	338984	+	TSC_hg19_v1_chr20_+_39765861 AB210028	447182	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.0	
chr21	43758890	43758956	reg1003663.p3	3.898	+	NM_003226 AF432265	-23191	-	L08044 DQ891963 DQ895153 L15203 BC017859 TSC_hg19_v1_chr21_-_43735520	-23432	-	TSC_hg19_v1_chr21_+_43710190 AF038175	-48710	+	X51698 BC032820 NM_005423	12215	-	M12075 BC032811 NM_003225 X00474 X52003	27699	-	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	57238	-	NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##L08044|TFF3|7033|trefoil factor 3 (intestinal)##DQ891963|TFF3|7033|trefoil factor 3 (intestinal)##DQ895153|TFF3|7033|trefoil factor 3 (intestinal)##L15203|TFF3|7033|trefoil factor 3 (intestinal)##BC017859|TFF3|7033|trefoil factor 3 (intestinal)##AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3	0.0	
chr2	20795804	20795871	reg1031245.p2	3.898	+	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-149005	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-245418	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-268704	-	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	55011	-	AF522369 NM_182828	70586	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	227016	-	AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43	0.0	
chr2	8141116	8141253	reg1032222.p2	3.898	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1083597	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1123321	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1134481	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	681019	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	836535	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1002637	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.999379	CTCF.p2:13:0.999
chr4	151933237	151933417	reg1038328.p1	3.898	+	TSC_hg19_v1_chr4_-_151773972 BC172218	-159333	-	TSC_hg19_v1_chr4_-_151770612 AB208838	-162678	-	NM_006439	-430251	+	TSC_hg19_v1_chr4_-_151936437 AF467287 NM_001199282 BC064834	3091	-	AF216648 NM_006726	3321	-	TSC_hg19_v1_chr4_-_151936880 AK098039	3563	-	AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AF467287|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_001199282|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##BC064834|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##AF216648|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##NM_006726|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing##AK098039|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.0	
chr6	155650060	155650127	reg1034037.p1	3.898	+	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-14470	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-14508	-	BC020838 NM_001001346	-64947	+	AF190122 NM_015718	126943	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	1448970	+	TSC_hg19_v1_chr6_+_157099206 AB587572	1449132	+	BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##BC020838|CLDN20|49861|claudin 20##NM_001001346|CLDN20|49861|claudin 20##AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.0	
chr7	74621527	74621659	reg1035323.p1	3.898	+	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	-113219	+	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	-131901	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	-131955	-	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	245927	-	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	366977	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	403372	+	NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73	0.324006	CTCF.p2:16:0.324
chr10	69615631	69615812	reg1002537.p2	3.897	+	CR457184 AF176013 BC017018 AK289537 AF176012 NM_021800 NM_201262	-17869	-	AF091606 AK313882 NM_013266	-159784	-	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	-190325	-	TSC_hg19_v1_chr10_+_69644413 AF083106 NM_012238 AF235040	28686	+	AL136741 BC012499 TSC_hg19_v1_chr10_+_69644874	29071	+	AK289743 NM_001142498 TSC_hg19_v1_chr10_+_69644954	29228	+	CR457184|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176013|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##BC017018|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AK289537|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF176012|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_021800|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##NM_201262|DNAJC12|56521|DnaJ (Hsp40) homolog, subfamily C, member 12##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF083106|SIRT1|23411|sirtuin 1##NM_012238|SIRT1|23411|sirtuin 1##AF235040|SIRT1|23411|sirtuin 1##AL136741|SIRT1|23411|sirtuin 1##BC012499|SIRT1|23411|sirtuin 1##AK289743|SIRT1|23411|sirtuin 1##NM_001142498|SIRT1|23411|sirtuin 1	0.0	
chr11	6921951	6922077	reg1036840.p1	3.897	+	NM_003700 BC140729	-8235	-	BC137024 BC137027 NM_207186 AF209506	-24148	+	BC136955 NM_001004460	-31060	+	BC137208 BC137209 NM_001004684	20204	+	AK302639 AF056618 NM_013250 AK298365	25628	+	BC136772 BC144405 AF056617 AK313462 TSC_hg19_v1_chr11_-_7041578 NM_013249	119511	-	NM_003700|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2##BC140729|OR2D2|120776|olfactory receptor, family 2, subfamily D, member 2##BC137024|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4##BC137027|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4##NM_207186|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4##AF209506|OR10A4|283297|olfactory receptor, family 10, subfamily A, member 4##BC136955|OR10A2|341276|olfactory receptor, family 10, subfamily A, member 2##NM_001004460|OR10A2|341276|olfactory receptor, family 10, subfamily A, member 2##BC137208|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3##BC137209|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3##NM_001004684|OR2D3|120775|olfactory receptor, family 2, subfamily D, member 3##AF056618|ZNF215|7762|zinc finger protein 215##NM_013250|ZNF215|7762|zinc finger protein 215##AK298365|ZNF215|7762|zinc finger protein 215##BC136772|ZNF214|7761|zinc finger protein 214##BC144405|ZNF214|7761|zinc finger protein 214##AF056617|ZNF214|7761|zinc finger protein 214##AK313462|ZNF214|7761|zinc finger protein 214##NM_013249|ZNF214|7761|zinc finger protein 214	0.0	
chr15	71056358	71056448	reg1031185.p2	3.897	+	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	-561	-	BC016881 AL834243 NM_001008224 AK055435	-61776	-	TSC_hg19_v1_chr15_-_70878946 BC040579	-177459	-	CU675231 BC006082 BC009446 BC014018 AL833876 BC039153 TSC_hg19_v1_chr15_-_71146496 AK130092 AF443828 AF443829 AK002058 NM_018357 NM_197958	90065	-	CU693296 DQ890927 DQ894089 EU176528 AL360202 TSC_hg19_v1_chr15_-_71184737 BC027857 BC072414 AK313472 NM_020147	128288	-	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	128572	+	AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC006082|LARP6|55323|La ribonucleoprotein domain family, member 6##BC009446|LARP6|55323|La ribonucleoprotein domain family, member 6##BC014018|LARP6|55323|La ribonucleoprotein domain family, member 6##AL833876|LARP6|55323|La ribonucleoprotein domain family, member 6##BC039153|LARP6|55323|La ribonucleoprotein domain family, member 6##AK130092|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443828|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443829|LARP6|55323|La ribonucleoprotein domain family, member 6##AK002058|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_018357|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_197958|LARP6|55323|La ribonucleoprotein domain family, member 6##DQ890927|THAP10|56906|THAP domain containing 10##DQ894089|THAP10|56906|THAP domain containing 10##EU176528|THAP10|56906|THAP domain containing 10##AL360202|THAP10|56906|THAP domain containing 10##BC027857|THAP10|56906|THAP domain containing 10##BC072414|THAP10|56906|THAP domain containing 10##AK313472|THAP10|56906|THAP domain containing 10##NM_020147|THAP10|56906|THAP domain containing 10##BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49	0.0	
chr22	36775983	36776085	reg1037156.p2	3.897	+	D11393 TSC_hg19_v1_chr22_-_36697021	-79020	-	BC011915 TSC_hg19_v1_chr22_-_36681760	-94271	-	TSC_hg19_v1_chr22_+_36649178 AF305224 AK303919 AK313752 AK298053 BC113867 BC114475 BC127186 BC143038 BC143039 BC017331 AK296099	-126845	+	TSC_hg19_v1_chr22_-_36783906 AB290175 CR456526	7852	-	TSC_hg19_v1_chr22_-_36783943 M81105	7918	-	AK131080 TSC_hg19_v1_chr22_-_36783982 BC049849	7945	-	D11393|MYH9|4627|myosin, heavy chain 9, non-muscle##BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle##AF305224|APOL1|8542|apolipoprotein L, 1##AK303919|APOL1|8542|apolipoprotein L, 1##AK313752|APOL1|8542|apolipoprotein L, 1##AK298053|APOL1|8542|apolipoprotein L, 1##BC113867|APOL1|8542|apolipoprotein L, 1##BC114475|APOL1|8542|apolipoprotein L, 1##BC127186|APOL1|8542|apolipoprotein L, 1##BC143038|APOL1|8542|apolipoprotein L, 1##BC143039|APOL1|8542|apolipoprotein L, 1##BC017331|APOL1|8542|apolipoprotein L, 1##AK296099|APOL1|8542|apolipoprotein L, 1##AB290175|MYH9|4627|myosin, heavy chain 9, non-muscle##CR456526|MYH9|4627|myosin, heavy chain 9, non-muscle##M81105|MYH9|4627|myosin, heavy chain 9, non-muscle##AK131080|MYH9|4627|myosin, heavy chain 9, non-muscle##BC049849|MYH9|4627|myosin, heavy chain 9, non-muscle	0.0	
chr4	11220494	11220606	reg1032441.p1	3.897	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-534149	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-761540	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-1102014	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	209982	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2265401	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2265425	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr1	211556371	211556550	reg1038214.p3	3.896	+	TSC_hg19_v1_chr1_+_211556168 BC005997	-292	+	TSC_hg19_v1_chr1_+_211556144 AK130858	-313	+	BC029600 NM_145759	-36755	+	AY191519 NM_001164688 NM_183059	109798	-	AF364518 TSC_hg19_v1_chr1_-_211751805	195302	-	AB451467 TSC_hg19_v1_chr1_-_211752048	195540	-	BC005997|LINC00467|84791|long intergenic non-protein coding RNA 467##AK130858|LINC00467|84791|long intergenic non-protein coding RNA 467##BC029600|TRAF5|7188|TNF receptor-associated factor 5##NM_145759|TRAF5|7188|TNF receptor-associated factor 5##AY191519|RD3|343035|retinal degeneration 3##NM_001164688|RD3|343035|retinal degeneration 3##NM_183059|RD3|343035|retinal degeneration 3##AF364518|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1	0.0	
chr12	57456611	57456684	reg1028969.p1	3.896	+	AF105424 AF127026 NM_005379 BC059387	-12768	-	AF216586 AF186112 AX810719 AF136174 AX810703 AF537113 AF537114 AF537115 AF537116 AF537117 AF537118 AF537119 AF537120 AF537121 AY358679 BC032145 NM_001178054 NM_013251	-46338	-	BC140890 BC146867 AB002350 BC152461 TSC_hg19_v1_chr12_-_57400241 AK292468 NM_014830	-56396	-	TSC_hg19_v1_chr12_-_57472533 HQ258223 AB383838 AB006624	15864	-	TSC_hg19_v1_chr12_-_57472537 BC071597 BC117436 BC126300 BC144029 CR749406 AK294566	15893	-	TSC_hg19_v1_chr12_-_57472548 AL833310 AL833311	15902	-	AF105424|MYO1A|4640|myosin IA##AF127026|MYO1A|4640|myosin IA##NM_005379|MYO1A|4640|myosin IA##BC059387|MYO1A|4640|myosin IA##AF216586|TAC3|6866|tachykinin 3##AF186112|TAC3|6866|tachykinin 3##AF537113|TAC3|6866|tachykinin 3##AF537114|TAC3|6866|tachykinin 3##AF537115|TAC3|6866|tachykinin 3##AF537116|TAC3|6866|tachykinin 3##AF537117|TAC3|6866|tachykinin 3##AF537118|TAC3|6866|tachykinin 3##AF537119|TAC3|6866|tachykinin 3##AF537120|TAC3|6866|tachykinin 3##AF537121|TAC3|6866|tachykinin 3##AY358679|TAC3|6866|tachykinin 3##BC032145|TAC3|6866|tachykinin 3##NM_001178054|TAC3|6866|tachykinin 3##NM_013251|TAC3|6866|tachykinin 3##BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39##BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39##AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39##BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39##AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39##NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39##HQ258223|TMEM194A|23306|transmembrane protein 194A##AB006624|TMEM194A|23306|transmembrane protein 194A##BC071597|TMEM194A|23306|transmembrane protein 194A##BC117436|TMEM194A|23306|transmembrane protein 194A##BC126300|TMEM194A|23306|transmembrane protein 194A##BC144029|TMEM194A|23306|transmembrane protein 194A##CR749406|TMEM194A|23306|transmembrane protein 194A##AK294566|TMEM194A|23306|transmembrane protein 194A##AL833310|TMEM194A|23306|transmembrane protein 194A##AL833311|TMEM194A|23306|transmembrane protein 194A	0.967562	CTCF.p2:8:0.968
chr15	63795502	63795683	reg1023856.p1	3.896	+	AK315769 NM_001218 NM_206925 TSC_hg19_v1_chr15_-_63674076	-121517	-	BT006656 DQ893188 DQ896511 EU831616 EU831623 EU831703 EU831708 AF051882 BC000278 AF037335 BC011691 TSC_hg19_v1_chr15_-_63674046 AK096845 BC023981	-121600	-	NM_001145646 NM_031301 TSC_hg19_v1_chr15_+_63569803 AK291204 AL136671 BC020905 AB189172 AB197122 AF508794 AX776001 AY358698 AB528062 AM392724 AM392878 DQ891401 CU676772 AK307725	-225779	+	TSC_hg19_v1_chr15_+_63796791 AK314223	1190	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	1285	+	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	93987	+	AK315769|CA12|771|carbonic anhydrase XII##NM_001218|CA12|771|carbonic anhydrase XII##NM_206925|CA12|771|carbonic anhydrase XII##BT006656|CA12|771|carbonic anhydrase XII##DQ893188|CA12|771|carbonic anhydrase XII##DQ896511|CA12|771|carbonic anhydrase XII##EU831616|CA12|771|carbonic anhydrase XII##EU831623|CA12|771|carbonic anhydrase XII##EU831703|CA12|771|carbonic anhydrase XII##EU831708|CA12|771|carbonic anhydrase XII##AF051882|CA12|771|carbonic anhydrase XII##BC000278|CA12|771|carbonic anhydrase XII##AF037335|CA12|771|carbonic anhydrase XII##BC011691|CA12|771|carbonic anhydrase XII##AK096845|CA12|771|carbonic anhydrase XII##BC023981|CA12|771|carbonic anhydrase XII##NM_001145646|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##NM_031301|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK291204|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AL136671|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##BC020905|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB189172|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB197122|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AF508794|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AY358698|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392724|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392878|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##DQ891401|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK307725|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK314223|USP3|9960|ubiquitin specific peptidase 3##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22	0.0	
chr16	58034658	58034739	reg1030013.p1	3.896	+	AB037809 NM_020807	-937	-	AY363222 AY363223 NM_199046 NM_199456 BC104458 BC104459	-24356	+	U58837 NM_001135639 NM_001297 U18945	-29683	-	NM_001195302 NM_001204911 NM_024598 TSC_hg19_v1_chr16_+_58035304 AK023216	593	+	TSC_hg19_v1_chr16_+_58035310 AK293220 AK298473 AK303121 BC010099 AK301494 BC004415 BC007774 BC006291 BC021554	634	+	NM_002428	24583	+	AB037809|ZNF319|57567|zinc finger protein 319##NM_020807|ZNF319|57567|zinc finger protein 319##AY363222|TEPP|374739|testis, prostate and placenta expressed##AY363223|TEPP|374739|testis, prostate and placenta expressed##NM_199046|TEPP|374739|testis, prostate and placenta expressed##NM_199456|TEPP|374739|testis, prostate and placenta expressed##BC104458|TEPP|374739|testis, prostate and placenta expressed##BC104459|TEPP|374739|testis, prostate and placenta expressed##U58837|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001135639|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001297|CNGB1|1258|cyclic nucleotide gated channel beta 1##U18945|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001195302|C16orf57|79650|chromosome 16 open reading frame 57##NM_001204911|C16orf57|79650|chromosome 16 open reading frame 57##NM_024598|C16orf57|79650|chromosome 16 open reading frame 57##AK023216|C16orf57|79650|chromosome 16 open reading frame 57##AK293220|C16orf57|79650|chromosome 16 open reading frame 57##AK298473|C16orf57|79650|chromosome 16 open reading frame 57##AK303121|C16orf57|79650|chromosome 16 open reading frame 57##BC010099|C16orf57|79650|chromosome 16 open reading frame 57##AK301494|C16orf57|79650|chromosome 16 open reading frame 57##BC004415|C16orf57|79650|chromosome 16 open reading frame 57##BC007774|C16orf57|79650|chromosome 16 open reading frame 57##BC006291|C16orf57|79650|chromosome 16 open reading frame 57##BC021554|C16orf57|79650|chromosome 16 open reading frame 57##NM_002428|MMP15|4324|matrix metallopeptidase 15 (membrane-inserted)	0.969341	CTCF.p2:-10:0.969
chr17	48578580	48578667	reg1032042.p1	3.896	+	TSC_hg19_v1_chr17_+_48556220 AK022105 AK293814 AK297655 BC050538	-22391	+	TSC_hg19_v1_chr17_+_48556216 AK002026 NM_018346 AK222472	-22425	+	CU690332 BC036360 AF371328 BC073974 NM_001267 TSC_hg19_v1_chr17_-_48546242 AK292177	-32403	-	AK303041 NM_032133 TSC_hg19_v1_chr17_+_48585809 BC036358	7193	+	TSC_hg19_v1_chr17_+_48585945 BC028393 AB083068 AK314052 AL832225	7335	+	TSC_hg19_v1_chr17_+_48610049 NM_017957	31424	+	AK022105|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK293814|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK297655|RSAD1|55316|radical S-adenosyl methionine domain containing 1##BC050538|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK002026|RSAD1|55316|radical S-adenosyl methionine domain containing 1##NM_018346|RSAD1|55316|radical S-adenosyl methionine domain containing 1##AK222472|RSAD1|55316|radical S-adenosyl methionine domain containing 1##BC036360|CHAD|1101|chondroadherin##AF371328|CHAD|1101|chondroadherin##BC073974|CHAD|1101|chondroadherin##NM_001267|CHAD|1101|chondroadherin##AK292177|CHAD|1101|chondroadherin##AK303041|MYCBPAP|84073|MYCBP associated protein##NM_032133|MYCBPAP|84073|MYCBP associated protein##BC036358|MYCBPAP|84073|MYCBP associated protein##BC028393|MYCBPAP|84073|MYCBP associated protein##AB083068|MYCBPAP|84073|MYCBP associated protein##AK314052|MYCBPAP|84073|MYCBP associated protein##AL832225|MYCBPAP|84073|MYCBP associated protein##NM_017957|EPN3|55040|epsin 3	0.258843	CTCF.p2:-8:0.259
chr3	190881030	190881096	reg1044773.p1	3.896	+	NM_001146686	-300599	-	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	-649186	+	CU687168 BC071780 AY358607 NM_207316	-713433	-	AY398681 AY573933 BC128106 BC128107 NM_198184	49258	+	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	166103	+	AK090630 AX746546 NM_198152	167261	-	NM_001146686|GMNC|647309|geminin coiled-coil domain containing##NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207##AY398681|OSTN|344901|osteocrin##AY573933|OSTN|344901|osteocrin##BC128106|OSTN|344901|osteocrin##BC128107|OSTN|344901|osteocrin##NM_198184|OSTN|344901|osteocrin##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing	0.0	
chr3	48474589	48474694	reg1029540.p2	3.896	+	TSC_hg19_v1_chr3_-_48471516 BC066773 NM_001130082 AK296776	-3144	-	TSC_hg19_v1_chr3_-_48471023 AB007867 BC146793 NM_002673	-3761	-	AY247969 NM_001159927 NM_001159929 NM_207102 BC101303 BC101304 BC101305 BC101306	-60905	+	BC011993 AK022498 NM_024661	6882	-	TSC_hg19_v1_chr3_+_48481685 BC066333 AF077202 BC080531 AY508979 AY794023 NM_015933 BC001102	7039	+	AK126594 TSC_hg19_v1_chr3_+_48481716 AF161448	7117	+	BC066773|PLXNB1|5364|plexin B1##NM_001130082|PLXNB1|5364|plexin B1##AK296776|PLXNB1|5364|plexin B1##AB007867|PLXNB1|5364|plexin B1##BC146793|PLXNB1|5364|plexin B1##NM_002673|PLXNB1|5364|plexin B1##AY247969|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12##NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12##BC101303|FBXW12|285231|F-box and WD repeat domain containing 12##BC101304|FBXW12|285231|F-box and WD repeat domain containing 12##BC101305|FBXW12|285231|F-box and WD repeat domain containing 12##BC101306|FBXW12|285231|F-box and WD repeat domain containing 12##BC011993|CCDC51|79714|coiled-coil domain containing 51##AK022498|CCDC51|79714|coiled-coil domain containing 51##NM_024661|CCDC51|79714|coiled-coil domain containing 51##BC066333|CCDC72|51372|coiled-coil domain containing 72##AF077202|CCDC72|51372|coiled-coil domain containing 72##BC080531|CCDC72|51372|coiled-coil domain containing 72##AY508979|CCDC72|51372|coiled-coil domain containing 72##AY794023|CCDC72|51372|coiled-coil domain containing 72##NM_015933|CCDC72|51372|coiled-coil domain containing 72##BC001102|CCDC72|51372|coiled-coil domain containing 72##AK126594|CCDC72|51372|coiled-coil domain containing 72##AF161448|CCDC72|51372|coiled-coil domain containing 72	0.84603	CTCF.p2:4:0.785
chr4	43778567	43778679	reg1034086.p2	3.896	+	AB528853 NM_001080476	-883342	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	-1119535	-	NM_001080505	-1378768	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	671930	-	AK123347 NM_198353	672200	-	AK096895 BC103995 BC103996 NM_182592	875034	-	NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7	0.975043	CTCF.p2:-29:0.975
chr7	111493784	111493928	reg1034283.p1	3.896	+	TSC_hg19_v1_chr7_-_111428948 AK294820	-64845	-	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	-291372	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-762733	+	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	352409	-	TSC_hg19_v1_chr7_-_111846458 AK095906 AK309605 NM_014705	352606	-	AF209198 NM_021994 TSC_hg19_v1_chr7_+_111846702	352816	+	AK294820|DOCK4|9732|dedicator of cytokinesis 4##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4##AK095906|DOCK4|9732|dedicator of cytokinesis 4##AK309605|DOCK4|9732|dedicator of cytokinesis 4##NM_014705|DOCK4|9732|dedicator of cytokinesis 4##AF209198|ZNF277|11179|zinc finger protein 277##NM_021994|ZNF277|11179|zinc finger protein 277	0.487889	CTCF.p2:-14:0.488
chr8	67351477	67351616	reg1005387.p2	3.896	+	NM_144650 AY033237 AK056992 AK300881 BC047492 BC064634 AK293530 AK300243 AK294114 BC110290	-6814	+	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	-10240	+	BC002599 BC011031 AK075431 NM_000756	-260779	-	NM_152765	53944	+	BC032233 NM_001080416 NM_001144755 TSC_hg19_v1_chr8_-_67525502	173928	-	AM392649 AM393766 TSC_hg19_v1_chr8_-_67579266	227685	-	NM_144650|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AY033237|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK056992|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300881|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC047492|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC064634|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK293530|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300243|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK294114|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC110290|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone##NM_152765|C8orf46|254778|chromosome 8 open reading frame 46##BC032233|LOC645895|645895|uncharacterized LOC645895##NM_001080416|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1##NM_001144755|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1##AM392649|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##AM393766|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1	0.0	
chr1	21996447	21996567	reg1033179.p1	3.895	+	AB007943 M64788 TSC_hg19_v1_chr1_-_21995851 NM_001145657 NM_002885	-674	-	BC054490 TSC_hg19_v1_chr1_-_21978334 NM_001145658	-18160	-	AB003930 TSC_hg19_v1_chr1_-_21949064	-47470	-	CU679968 AB384973 AK315005 BC104896 BC143343 BC143349 BC143354 TSC_hg19_v1_chr1_-_22109586 AK074247 AF502942 BC011576	113018	-	TSC_hg19_v1_chr1_-_22109643 BC103724 BC067261	113127	-	TSC_hg19_v1_chr1_-_22109701 AK026930 NM_001032730 NM_032236	113192	-	AB007943|RAP1GAP|5909|RAP1 GTPase activating protein##M64788|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145657|RAP1GAP|5909|RAP1 GTPase activating protein##NM_002885|RAP1GAP|5909|RAP1 GTPase activating protein##BC054490|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145658|RAP1GAP|5909|RAP1 GTPase activating protein##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein##AK315005|USP48|84196|ubiquitin specific peptidase 48##BC104896|USP48|84196|ubiquitin specific peptidase 48##BC143343|USP48|84196|ubiquitin specific peptidase 48##BC143349|USP48|84196|ubiquitin specific peptidase 48##BC143354|USP48|84196|ubiquitin specific peptidase 48##AK074247|USP48|84196|ubiquitin specific peptidase 48##AF502942|USP48|84196|ubiquitin specific peptidase 48##BC011576|USP48|84196|ubiquitin specific peptidase 48##BC103724|USP48|84196|ubiquitin specific peptidase 48##BC067261|USP48|84196|ubiquitin specific peptidase 48##NM_001032730|USP48|84196|ubiquitin specific peptidase 48##NM_032236|USP48|84196|ubiquitin specific peptidase 48	0.0	
chr1	229992075	229992161	reg1031876.p2	3.895	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-230104	+	AK291013 TSC_hg19_v1_chr1_+_229761973 D50923 NM_014777 BC059381	-230144	+	NM_001025247 NM_014409 TSC_hg19_v1_chr1_-_229761804	-230320	-	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	210824	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	210878	+	BC150638 NM_024554	521272	-	BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##AK291013|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##D50923|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_014777|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC059381|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_001025247|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_014409|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5	0.0	
chr12	739325	739446	reg1041593.p1	3.895	+	AB089940 NM_173593	-169843	+	NM_001130146 NM_032358 AK293165 TSC_hg19_v1_chr12_+_510809 AK027638	-228604	+	TSC_hg19_v1_chr12_-_498451 AK301150 AK301273 AB209999 BC048307 BC053893 NM_001042603 BC092417	-240783	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	12793	+	TSC_hg19_v1_chr12_-_752800 AK298043	13434	-	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	33330	-	AB089940|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_173593|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_001130146|CCDC77|84318|coiled-coil domain containing 77##NM_032358|CCDC77|84318|coiled-coil domain containing 77##AK293165|CCDC77|84318|coiled-coil domain containing 77##AK027638|CCDC77|84318|coiled-coil domain containing 77##AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A##AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A##AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A##BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A##BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A##NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A##BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2	0.0	
chr14	75988798	75988881	reg1034168.p2	3.895	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	-49	+	BC051303 NM_001135049	-90003	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	-93826	+	TSC_hg19_v1_chr14_+_75988840 D42106	13	+	NM_017791 AY260572 AY260577 BC019087 AK000378	56126	+	AK297002 NM_001195283	82965	+	NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	0.589066	CTCF.p2:77:0.589
chr17	6918480	6918546	reg1033787.p2	3.895	+	TSC_hg19_v1_chr17_+_6918100 AK295795 BC040036	-406	+	NM_001142798 NM_001142799 NM_174893 TSC_hg19_v1_chr17_+_6918071 AK055800	-445	+	TSC_hg19_v1_chr17_+_6915973 BC040148	-2538	+	TSC_hg19_v1_chr17_+_6926368 BC059404 NM_181844 AK293102 AK292878 AB076580	7864	+	TSC_hg19_v1_chr17_+_6926416 AK122893	7904	+	TSC_hg19_v1_chr17_+_6939347 BC142618 NM_201566	20872	+	AK295795|C17orf49|124944|chromosome 17 open reading frame 49##BC040036|C17orf49|124944|chromosome 17 open reading frame 49##NM_001142798|C17orf49|124944|chromosome 17 open reading frame 49##NM_001142799|C17orf49|124944|chromosome 17 open reading frame 49##NM_174893|C17orf49|124944|chromosome 17 open reading frame 49##AK055800|C17orf49|124944|chromosome 17 open reading frame 49##BC040148|RNASEK-C17ORF49|100529209|RNASEK-C17orf49 readthrough##BC059404|BCL6B|255877|B-cell CLL/lymphoma 6, member B##NM_181844|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AK293102|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AK292878|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AB076580|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AK122893|BCL6B|255877|B-cell CLL/lymphoma 6, member B##BC142618|SLC16A13|201232|solute carrier family 16, member 13 (monocarboxylic acid transporter 13)##NM_201566|SLC16A13|201232|solute carrier family 16, member 13 (monocarboxylic acid transporter 13)	0.0	
chr22	42314289	42314404	reg1034370.p2	3.895	+	NM_001207020	-3676	-	TSC_hg19_v1_chr22_+_42229269 CU013184 CU013472 AB463291	-85075	+	TSC_hg19_v1_chr22_+_42229253 BC056158 U02031 BC051385 CT841522 AK299914	-85145	+	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	8453	-	EU035297 NM_001110215	21876	-	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	28777	-	NM_001207020|SHISA8|440829|shisa homolog 8 (Xenopus laevis)##CU013184|SREBF2|6721|sterol regulatory element binding transcription factor 2##CU013472|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC056158|SREBF2|6721|sterol regulatory element binding transcription factor 2##U02031|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051385|SREBF2|6721|sterol regulatory element binding transcription factor 2##CT841522|SREBF2|6721|sterol regulatory element binding transcription factor 2##AK299914|SREBF2|6721|sterol regulatory element binding transcription factor 2##AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M	0.0	
chr2	74210560	74210668	reg1028593.p1	3.895	+	TSC_hg19_v1_chr2_+_74154019 X97386	-56568	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-56614	+	TSC_hg19_v1_chr2_+_74153968 NM_080916 NM_080918	-56664	+	NM_144993	62835	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	164404	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	164606	+	X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##NM_080916|DGUOK|1716|deoxyguanosine kinase##NM_080918|DGUOK|1716|deoxyguanosine kinase##NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.0	
chr2	96822744	96822920	reg1020551.p1	3.895	+	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	-11673	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	-11878	-	BC107126 AJ537600 BC107127 NM_001002036	-18659	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	51223	-	TSC_hg19_v1_chr2_+_96874144 AK311432	51322	+	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	51702	-	BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.088049	
chr3	129154349	129154438	reg1034244.p1	3.895	+	CU688234 AK127968 BC031104 BC066975 NM_207307	-6981	-	TSC_hg19_v1_chr3_-_129118263 BC053996 AK093477	-36130	-	TSC_hg19_v1_chr3_-_129035130 BC000426 NM_006026	-119293	-	AM180876 CR450305 CU680042 BC034463 U56254 U56428 TSC_hg19_v1_chr3_-_129158722 BC011752	4325	-	AK312878 TSC_hg19_v1_chr3_-_129158781 AF114784	4404	-	AF532602 AF072250 NM_003925 TSC_hg19_v1_chr3_-_129158864 AK303013	4478	-	AK127968|C3orf25|90288|chromosome 3 open reading frame 25##BC031104|C3orf25|90288|chromosome 3 open reading frame 25##BC066975|C3orf25|90288|chromosome 3 open reading frame 25##NM_207307|C3orf25|90288|chromosome 3 open reading frame 25##BC053996|RPL32P3|132241|ribosomal protein L32 pseudogene 3##AK093477|RPL32P3|132241|ribosomal protein L32 pseudogene 3##BC000426|H1FX|8971|H1 histone family, member X##NM_006026|H1FX|8971|H1 histone family, member X##AM180876|MBD4|8930|methyl-CpG binding domain protein 4##CR450305|MBD4|8930|methyl-CpG binding domain protein 4##BC034463|MBD4|8930|methyl-CpG binding domain protein 4##BC011752|MBD4|8930|methyl-CpG binding domain protein 4##AK312878|MBD4|8930|methyl-CpG binding domain protein 4##AF114784|MBD4|8930|methyl-CpG binding domain protein 4##AF532602|MBD4|8930|methyl-CpG binding domain protein 4##AF072250|MBD4|8930|methyl-CpG binding domain protein 4##NM_003925|MBD4|8930|methyl-CpG binding domain protein 4##AK303013|MBD4|8930|methyl-CpG binding domain protein 4	0.067427	
chr4	79963264	79963331	reg1007286.p1	3.895	+	AK055774 BX648346 CU689134 AY424281 BC029604 TSC_hg19_v1_chr4_-_79860593 BC031256 BC047510 AK291232 NM_001040202 AX775925	-102815	-	TSC_hg19_v1_chr4_+_79697552 AK292147 BC036021 DQ890994	-265674	+	NM_017593 NM_198892 TSC_hg19_v1_chr4_+_79697532	-265761	+	BC063623 BC080651 BC004552 NM_032693	283864	-	CU688758 DQ891321 DQ894505 BC058888 AK312768 BC029820 BC048274 X78712 NM_033214 AK292241 BC027598	366070	-	AB527650 AY233452 TSC_hg19_v1_chr4_-_80993874 AY040326 BC114374 AB209913	1030591	-	AK055774|PAQR3|152559|progestin and adipoQ receptor family member III##BX648346|PAQR3|152559|progestin and adipoQ receptor family member III##AY424281|PAQR3|152559|progestin and adipoQ receptor family member III##BC029604|PAQR3|152559|progestin and adipoQ receptor family member III##BC031256|PAQR3|152559|progestin and adipoQ receptor family member III##BC047510|PAQR3|152559|progestin and adipoQ receptor family member III##AK291232|PAQR3|152559|progestin and adipoQ receptor family member III##NM_001040202|PAQR3|152559|progestin and adipoQ receptor family member III##AX775925|PAQR3|152559|progestin and adipoQ receptor family member III##AK292147|BMP2K|55589|BMP2 inducible kinase##BC036021|BMP2K|55589|BMP2 inducible kinase##DQ890994|BMP2K|55589|BMP2 inducible kinase##NM_017593|BMP2K|55589|BMP2 inducible kinase##NM_198892|BMP2K|55589|BMP2 inducible kinase##BC063623|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC080651|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##BC004552|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##NM_032693|NAA11|84779|N(alpha)-acetyltransferase 11, NatA catalytic subunit##DQ891321|GK2|2712|glycerol kinase 2##DQ894505|GK2|2712|glycerol kinase 2##BC058888|GK2|2712|glycerol kinase 2##BC029820|GK2|2712|glycerol kinase 2##BC048274|GK2|2712|glycerol kinase 2##X78712|GK2|2712|glycerol kinase 2##NM_033214|GK2|2712|glycerol kinase 2##AK292241|GK2|2712|glycerol kinase 2##BC027598|GK2|2712|glycerol kinase 2##AY233452|ANTXR2|118429|anthrax toxin receptor 2##AY040326|ANTXR2|118429|anthrax toxin receptor 2##BC114374|ANTXR2|118429|anthrax toxin receptor 2##AB209913|ANTXR2|118429|anthrax toxin receptor 2	0.0	
chr5	115910540	115910696	reg1035628.p1	3.895	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-104	-	TSC_hg19_v1_chr5_+_115898220 D28352	-12394	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-489897	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2413620	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2496193	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2496547	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr5	126112964	126113144	reg1037433.p2	3.895	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	-172	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	-223	+	NM_005573 BC052951	-739	+	TSC_hg19_v1_chr5_+_126113050 AB527547 DQ891592 EU176582 CU680274	70	+	BC146948 BC146964 AF055007 TSC_hg19_v1_chr5_-_126366251 BC047569 AK290129	253121	-	NM_178450	253385	-	AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1##NM_005573|LMNB1|4001|lamin B1##BC052951|LMNB1|4001|lamin B1##DQ891592|LMNB1|4001|lamin B1##EU176582|LMNB1|4001|lamin B1##BC146948|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146964|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AF055007|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC047569|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK290129|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3	0.217407	CTCF.p2:82:0.217
chr5	130588562	130588742	reg1027938.p1	3.895	+	TSC_hg19_v1_chr5_+_130506676 BC037930 BC047079	-81981	+	AK000803 NM_181705 TSC_hg19_v1_chr5_+_130506648	-82009	+	TSC_hg19_v1_chr5_-_130501019 NM_005340	-87609	-	NM_001038702 NM_020240 TSC_hg19_v1_chr5_+_130599737	11069	+	TSC_hg19_v1_chr5_+_130599764 BC023555 BC050430	11104	+	AK312406 TSC_hg19_v1_chr5_+_130599768	11116	+	BC037930|LYRM7|90624|Lyrm7 homolog (mouse)##BC047079|LYRM7|90624|Lyrm7 homolog (mouse)##AK000803|LYRM7|90624|Lyrm7 homolog (mouse)##NM_181705|LYRM7|90624|Lyrm7 homolog (mouse)##NM_005340|HINT1|3094|histidine triad nucleotide binding protein 1##NM_001038702|CDC42SE2|56990|CDC42 small effector 2##NM_020240|CDC42SE2|56990|CDC42 small effector 2##BC023555|CDC42SE2|56990|CDC42 small effector 2##BC050430|CDC42SE2|56990|CDC42 small effector 2##AK312406|CDC42SE2|56990|CDC42 small effector 2	0.0	
chr6	112166835	112166943	reg1036303.p1	3.895	+	BC032496 NM_153048	-86581	-	AB451293 AB451426 AB528738 CU689398 S74774 NM_153047	-125631	-	NM_001164281 NM_147686	-239416	-	M14676 TSC_hg19_v1_chr6_-_112194641 M14333	27646	-	TSC_hg19_v1_chr6_-_112194648 NM_002037	27766	-	BC012028 NM_003880 BC035250 NM_198239 BC105940 BC105941 AY358349 AF100781 AY358350 AB075040	208528	+	BC032496|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153048|FYN|2534|FYN oncogene related to SRC, FGR, YES##AB451293|FYN|2534|FYN oncogene related to SRC, FGR, YES##AB451426|FYN|2534|FYN oncogene related to SRC, FGR, YES##S74774|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_153047|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_001164281|TRAF3IP2|10758|TRAF3 interacting protein 2##NM_147686|TRAF3IP2|10758|TRAF3 interacting protein 2##M14676|FYN|2534|FYN oncogene related to SRC, FGR, YES##M14333|FYN|2534|FYN oncogene related to SRC, FGR, YES##NM_002037|FYN|2534|FYN oncogene related to SRC, FGR, YES##BC012028|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_003880|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC035250|WISP3|8838|WNT1 inducible signaling pathway protein 3##NM_198239|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105940|WISP3|8838|WNT1 inducible signaling pathway protein 3##BC105941|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358349|WISP3|8838|WNT1 inducible signaling pathway protein 3##AF100781|WISP3|8838|WNT1 inducible signaling pathway protein 3##AY358350|WISP3|8838|WNT1 inducible signaling pathway protein 3##AB075040|WISP3|8838|WNT1 inducible signaling pathway protein 3	0.594941	CTCF.p2:1:0.595
chr7	42871392	42871498	reg1036115.p1	3.895	+	TSC_hg19_v1_chr7_-_42276797 AK308429	-594650	-	NM_000168	-594828	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-1128760	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	80144	-	BC002900 AB528708 CR450317 CU690460 D00760 BC047697 TSC_hg19_v1_chr7_-_42971774 AK311369 BX641097 AK222976	100308	-	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	100356	-	AK308429|GLI3|2737|GLI family zinc finger 3##NM_000168|GLI3|2737|GLI family zinc finger 3##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25##BC002900|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##CR450317|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##D00760|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC047697|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BX641097|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK222976|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2	0.785321	CTCF.p2:2:0.785
chr7	90338177	90338243	reg1033804.p2	3.895	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	-112401	+	TSC_hg19_v1_chr7_+_90032774 AL136770 BC016061	-305406	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	-305506	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	573	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	950	+	BC017719 TSC_hg19_v1_chr7_+_90893724	555491	+	AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##AL136770|CLDN12|9069|claudin 12##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14##BC017719|FZD1|8321|frizzled family receptor 1	0.0	
chr10	52761501	52761639	reg1039622.p1	3.894	+	TSC_hg19_v1_chr10_+_52751129 D45864	-10449	+	TSC_hg19_v1_chr10_+_52750944 AK300110	-10630	+	TSC_hg19_v1_chr10_+_52750904 NM_001098512	-10663	+	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	72721	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	697777	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	1312545	+	D45864|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK300110|PRKG1|5592|protein kinase, cGMP-dependent, type I##NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)	0.999383	CTCF.p2:-9:0.999
chr11	128627904	128628027	reg1014696.p2	3.894	+	TSC_hg19_v1_chr11_+_128564132 AB385119 AY029368 CU674822 DQ892582 DQ896858	-63823	+	TSC_hg19_v1_chr11_+_128563997 X67001 S45205 BC010115 BC001670	-63910	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	-63985	+	BC136360 BC136361 BC074752 NM_000220 U12541 AK314267 AK290797	84413	-	U12544 U12545 AK308032 U12543 U03884 AK308033 BC063109 NM_153764 NM_153765 NM_153766 NM_153767 U12542	109234	-	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	133375	+	AY029368|FLI1|2313|Friend leukemia virus integration 1##DQ892582|FLI1|2313|Friend leukemia virus integration 1##DQ896858|FLI1|2313|Friend leukemia virus integration 1##X67001|FLI1|2313|Friend leukemia virus integration 1##S45205|FLI1|2313|Friend leukemia virus integration 1##BC010115|FLI1|2313|Friend leukemia virus integration 1##BC001670|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1##BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5	0.039985	
chr11	47270328	47270452	reg1025699.p1	3.894	+	AK298439 TSC_hg19_v1_chr11_-_47270266	-168	-	AK311590 NM_001251934 NM_001251935 AK302132	-535	+	NM_000107 U18300 TSC_hg19_v1_chr11_+_47236524 AK313262 BC050455 AK091640 AX747106 BC000093 AB527602 AB107037 AB107038 AB107039 AB107040 BT007139 CU674030 DQ890719	-33801	+	DQ892669 DQ895913 BC003160 TSC_hg19_v1_chr11_-_47270357 X12548 AK298122 AK097626 AK300569 AK300931 AK301860 AK308512 BC093010 AK299382 AK300911 AK303894 AK311431 NM_001131064 NM_001610	7	-	TSC_hg19_v1_chr11_+_47270457 NM_001130102 BC041172	75	+	NM_001130101 NM_005693 TSC_hg19_v1_chr11_+_47279546 AK290614 AK313311 AK309027 AK122661 BC008819	9122	+	AK298439|ACP2|53|acid phosphatase 2, lysosomal##AK311590|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##NM_001251934|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##NM_001251935|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK302132|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##NM_000107|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##U18300|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AK313262|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BC050455|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AK091640|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BC000093|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107037|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107038|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107039|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##AB107040|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##BT007139|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##DQ890719|DDB2|1643|damage-specific DNA binding protein 2, 48kDa##DQ892669|ACP2|53|acid phosphatase 2, lysosomal##DQ895913|ACP2|53|acid phosphatase 2, lysosomal##BC003160|ACP2|53|acid phosphatase 2, lysosomal##X12548|ACP2|53|acid phosphatase 2, lysosomal##AK298122|ACP2|53|acid phosphatase 2, lysosomal##AK300569|ACP2|53|acid phosphatase 2, lysosomal##AK300931|ACP2|53|acid phosphatase 2, lysosomal##AK301860|ACP2|53|acid phosphatase 2, lysosomal##AK308512|ACP2|53|acid phosphatase 2, lysosomal##BC093010|ACP2|53|acid phosphatase 2, lysosomal##AK299382|ACP2|53|acid phosphatase 2, lysosomal##AK300911|ACP2|53|acid phosphatase 2, lysosomal##AK303894|ACP2|53|acid phosphatase 2, lysosomal##AK311431|ACP2|53|acid phosphatase 2, lysosomal##NM_001131064|ACP2|53|acid phosphatase 2, lysosomal##NM_001610|ACP2|53|acid phosphatase 2, lysosomal##NM_001130102|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##BC041172|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##NM_001130101|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##NM_005693|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK290614|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK313311|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK309027|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##AK122661|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3##BC008819|NR1H3|10062|nuclear receptor subfamily 1, group H, member 3	0.0	
chr1	161536256	161536436	reg1004633.p2	3.894	+	NM_001127593 NM_001127595 NM_001127596	-15934	-	BC036723 NM_000569 NM_001127592 AK302126	-16492	-	CU676090 CU689692 AK223268 TSC_hg19_v1_chr1_-_161519555 BC033678 AK223295 X52645 AB528616 CU691394	-16767	-	NM_201563 AK308168 AK307162 BC137397 BC137423 X17652 U90938 U90939 U90940 U90941 CU689254	14831	+	NM_001244753	64905	-	NM_000570	65406	-	NM_001127593|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_001127595|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_001127596|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##BC036723|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_000569|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_001127592|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK302126|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK223268|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##BC033678|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK223295|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##X52645|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_201563|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##AK308168|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##AK307162|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC137397|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC137423|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##X17652|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90938|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90939|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90940|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90941|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##NM_001244753|FCGR3B|2215|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)##NM_000570|FCGR3B|2215|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)	0.0	
chr1	185126377	185126445	reg1038419.p2	3.894	+	TSC_hg19_v1_chr1_+_185126418 AK291443	-15	+	NM_001105518 AK127980 TSC_hg19_v1_chr1_+_185126298 BC030781 NM_017673 AK315802	-141	+	AK302166 TSC_hg19_v1_chr1_-_185126203 NM_001202423	-220	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	159908	-	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	160059	-	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	577165	+	AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##NM_001105518|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK127980|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##BC030781|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##NM_017673|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK315802|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK302166|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##NM_001202423|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1	0.0	
chr1	85237929	85238071	reg1005667.p1	3.894	+	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-81924	-	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-197894	-	TSC_hg19_v1_chr1_-_84972262 NM_005274	-265731	-	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	120886	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	224708	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	276145	-	AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##NM_005274|GNG5|2787|guanine nucleotide binding protein (G protein), gamma 5##AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3	0.0	
chr1	9648584	9648706	reg1031219.p1	3.894	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-49009	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	-49113	+	TSC_hg19_v1_chr1_+_9415945 CU677397	-232699	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	311	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	63159	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	235250	-	BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1	0.018453	
chr20	54032213	54032367	reg1036087.p1	3.894	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-940076	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	-1207653	+	TSC_hg19_v1_chr20_+_52824396 NM_002623	-1207843	+	NM_080617	547721	-	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	791497	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	901734	+	BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##NM_002623|PFDN4|5203|prefoldin subunit 4##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B	0.564837	CTCF.p2:-12:0.565
chr5	23978277	23978370	reg1033985.p1	3.894	+	DQ388610 NM_020227 AK301776	-470580	+	L33477 NM_004061	-1124593	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-1124877	-	NM_006727	666761	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	3060348	-	TSC_hg19_v1_chr5_+_27472410 BC039509 BC046201 BC101438 BC101441 BC101982 BC122523	3494080	+	DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC039509|LOC643401|643401|uncharacterized LOC643401##BC046201|LOC643401|643401|uncharacterized LOC643401##BC101438|LOC643401|643401|uncharacterized LOC643401##BC101982|LOC643401|643401|uncharacterized LOC643401##BC122523|LOC643401|643401|uncharacterized LOC643401	0.983673	CTCF.p2:-9:0.984
chr6_qbl_hap6	1802297	1802363	reg1033596.p1	3.894	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.95208	CTCF.p2:-16:0.952
chr11	67169602	67169726	reg1031480.p2	3.893	+	TSC_hg19_v1_chr11_-_67169351 NM_001008709 NM_002708 NM_206873	-307	-	TSC_hg19_v1_chr11_-_67169325 BC008010	-347	-	BT006629 AB464100 S57501 TSC_hg19_v1_chr11_-_67169297 AK313586 X70848 M63960 BC004482 BC001888	-390	-	TSC_hg19_v1_chr11_+_67171379 BC035630	1724	+	AK126131 TSC_hg19_v1_chr11_+_67171400 BC062999 NM_198517 BC047319 BC036873 BC022202	1872	+	TSC_hg19_v1_chr11_+_67183148 AK294035 AK295331 EF560746 NM_001166222 NM_020811	13486	+	NM_001008709|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##NM_002708|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##NM_206873|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC008010|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BT006629|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##S57501|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##AK313586|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##X70848|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##M63960|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC004482|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC001888|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC035630|TBC1D10C|374403|TBC1 domain family, member 10C##BC062999|TBC1D10C|374403|TBC1 domain family, member 10C##NM_198517|TBC1D10C|374403|TBC1 domain family, member 10C##BC047319|TBC1D10C|374403|TBC1 domain family, member 10C##BC036873|TBC1D10C|374403|TBC1 domain family, member 10C##BC022202|TBC1D10C|374403|TBC1 domain family, member 10C##AK294035|CARNS1|57571|carnosine synthase 1##AK295331|CARNS1|57571|carnosine synthase 1##EF560746|CARNS1|57571|carnosine synthase 1##NM_001166222|CARNS1|57571|carnosine synthase 1##NM_020811|CARNS1|57571|carnosine synthase 1	0.0	
chr11	69216554	69216714	reg1034630.p2	3.893	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	-155012	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-359108	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-400208	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	239222	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	239276	+	BC000076 BC001501 BC014078 TSC_hg19_v1_chr11_+_69455939 M73554 BC023620	239316	+	AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1##BC000076|CCND1|595|cyclin D1##BC001501|CCND1|595|cyclin D1##BC014078|CCND1|595|cyclin D1##M73554|CCND1|595|cyclin D1##BC023620|CCND1|595|cyclin D1	0.0	
chr12	102800033	102800110	reg1035951.p1	3.893	+	DQ892335 DQ895540 M57703 BC018048 NM_002674	-208491	-	NM_017915 AK302724 AK300041 BC070270 AF274940 BC030962 BC018903 AK303571 AK000648 BC014313	-286013	+	TSC_hg19_v1_chr12_-_102513850 AK296733 AK310619	-286193	-	TSC_hg19_v1_chr12_-_102872329 M37484 NM_001111284	72307	-	AB384874 BC148266 CR541861 X56773 X56774 M29644 X00173 TSC_hg19_v1_chr12_-_102874271	74144	-	TSC_hg19_v1_chr12_-_102874302 BC152321 M27544	74231	-	DQ892335|PMCH|5367|pro-melanin-concentrating hormone##DQ895540|PMCH|5367|pro-melanin-concentrating hormone##M57703|PMCH|5367|pro-melanin-concentrating hormone##BC018048|PMCH|5367|pro-melanin-concentrating hormone##NM_002674|PMCH|5367|pro-melanin-concentrating hormone##NM_017915|C12orf48|55010|chromosome 12 open reading frame 48##AK302724|C12orf48|55010|chromosome 12 open reading frame 48##AK300041|C12orf48|55010|chromosome 12 open reading frame 48##BC070270|C12orf48|55010|chromosome 12 open reading frame 48##AF274940|C12orf48|55010|chromosome 12 open reading frame 48##BC030962|C12orf48|55010|chromosome 12 open reading frame 48##BC018903|C12orf48|55010|chromosome 12 open reading frame 48##AK303571|C12orf48|55010|chromosome 12 open reading frame 48##AK000648|C12orf48|55010|chromosome 12 open reading frame 48##BC014313|C12orf48|55010|chromosome 12 open reading frame 48##AK296733|NUP37|79023|nucleoporin 37kDa##AK310619|NUP37|79023|nucleoporin 37kDa##M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	0.0	
chr1	25291407	25291587	reg1038334.p1	3.893	+	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-34711	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-34758	-	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	-35072	-	BC013362 AK310945 NM_001031680 AF022726	45	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	267490	-	BC065040 TSC_hg19_v1_chr1_-_25573922	282426	-	AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63	0.016097	
chr12	6422346	6422412	reg1031336.p2	3.893	+	AK095373 NM_001144857	-563	+	AK023741 NM_001144856	-2281	+	TSC_hg19_v1_chr12_+_6419886 BC040273	-2494	+	TSC_hg19_v1_chr12_-_6442970 AY182755	20615	-	AB590201 EU176385 EU176726 CU679633 EU927389 M60275 TSC_hg19_v1_chr12_-_6451145	28683	-	M58286 TSC_hg19_v1_chr12_-_6451171 M33294 AK056611 AK298729 AK304517 M63121 AK308061 AK291088 BC010140 AK315509 NM_001065	28841	-	AK095373|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144857|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AK023741|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144856|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC040273|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AY182755|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU176385|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU176726|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU927389|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M60275|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M58286|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M33294|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK056611|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK298729|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK304517|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M63121|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK308061|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK291088|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##BC010140|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK315509|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##NM_001065|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A	0.0	
chr17	42299592	42299681	reg1032884.p2	3.893	+	BC050302 TSC_hg19_v1_chr17_+_42299409	-291	+	AK292577 TSC_hg19_v1_chr17_-_42298971 AK292518	-699	-	TSC_hg19_v1_chr17_-_42298282 BC042297 NM_001076683	-1357	-	BC101574 BC101570 M27819 NM_000342 X12609 TSC_hg19_v1_chr17_-_42345504	45833	-	AL133657 NM_001144825 NM_001144826 NM_006695 TSC_hg19_v1_chr17_+_42385950 AB209802 AK226045 BC006194 AK313669 BX537443 AF055026 CR456748 CU675291 U93871	86354	+	TSC_hg19_v1_chr17_-_42402172 BC096819 BC009330 AK026060 AL133584 BC001398 AK289357 AK295478 AK301139	102530	-	AK292577|UBTF|7343|upstream binding transcription factor, RNA polymerase I##AK292518|UBTF|7343|upstream binding transcription factor, RNA polymerase I##BC042297|UBTF|7343|upstream binding transcription factor, RNA polymerase I##NM_001076683|UBTF|7343|upstream binding transcription factor, RNA polymerase I##BC101574|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##BC101570|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##M27819|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##NM_000342|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##X12609|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##AL133657|RUNDC3A|10900|RUN domain containing 3A##NM_001144825|RUNDC3A|10900|RUN domain containing 3A##NM_001144826|RUNDC3A|10900|RUN domain containing 3A##NM_006695|RUNDC3A|10900|RUN domain containing 3A##AB209802|RUNDC3A|10900|RUN domain containing 3A##AK226045|RUNDC3A|10900|RUN domain containing 3A##BC006194|RUNDC3A|10900|RUN domain containing 3A##AK313669|RUNDC3A|10900|RUN domain containing 3A##BX537443|RUNDC3A|10900|RUN domain containing 3A##AF055026|RUNDC3A|10900|RUN domain containing 3A##CR456748|RUNDC3A|10900|RUN domain containing 3A##U93871|RUNDC3A|10900|RUN domain containing 3A##BC096819|SLC25A39|51629|solute carrier family 25, member 39##BC009330|SLC25A39|51629|solute carrier family 25, member 39##AK026060|SLC25A39|51629|solute carrier family 25, member 39##AL133584|SLC25A39|51629|solute carrier family 25, member 39##BC001398|SLC25A39|51629|solute carrier family 25, member 39##AK289357|SLC25A39|51629|solute carrier family 25, member 39##AK295478|SLC25A39|51629|solute carrier family 25, member 39##AK301139|SLC25A39|51629|solute carrier family 25, member 39	0.861817	CTCF.p2:0:0.862
chr17	68804866	68804972	reg1039372.p1	3.893	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-639223	+	BC033038 NM_170742	-703925	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-733489	+	TSC_hg19_v1_chr17_-_70116937 AL833139	1312019	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	1312240	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	1312251	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.649011	CTCF.p2:-4:0.649
chr18	13139877	13139959	reg1030699.p1	3.893	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-148573	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-191854	+	TSC_hg19_v1_chr18_+_12948009 AK314403	-191912	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	78867	+	NM_001003674 NM_001003675	471746	+	AF009426 AF009427 NM_004338 NM_181483	480948	+	AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##AK314403|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1	1.313282	CTCF.p2:35:0.899	CTCF.p2:-73:0.414
chr20	55968663	55968746	reg1028057.p3	3.893	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-2247	+	NM_001190472	-33827	-	AK292247 AY349350 NM_001015885	-42103	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	131497	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	167453	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	226834	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.0	
chr21	16110267	16110367	reg1008409.p1	3.893	+	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	-191668	-	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-354844	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-521820	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	326900	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	992008	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	992224	+	BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25	0.0	
chr2	189849013	189849165	reg1039913.p1	3.893	+	TSC_hg19_v1_chr2_+_189839133 AB384877 X07240	-9916	+	X14420 BX649097 TSC_hg19_v1_chr2_+_189839117	-9971	+	TSC_hg19_v1_chr2_+_189839098 AK308010 NM_000090 BC028178	-9995	+	AB384824 J04478 Y14690 AB209045 BC086874 AK297936 TSC_hg19_v1_chr2_-_190044488 AK300146 M31365 NM_000393	195378	-	BC040567 NM_032168 TSC_hg19_v1_chr2_+_190306177	457081	+	TSC_hg19_v1_chr2_+_190306204 AK022607 AK290445 CR749440 AK022581 AK091546 AX747050	457120	+	X07240|COL3A1|1281|collagen, type III, alpha 1##X14420|COL3A1|1281|collagen, type III, alpha 1##AK308010|COL3A1|1281|collagen, type III, alpha 1##NM_000090|COL3A1|1281|collagen, type III, alpha 1##BC028178|COL3A1|1281|collagen, type III, alpha 1##J04478|COL5A2|1290|collagen, type V, alpha 2##Y14690|COL5A2|1290|collagen, type V, alpha 2##AB209045|COL5A2|1290|collagen, type V, alpha 2##BC086874|COL5A2|1290|collagen, type V, alpha 2##AK297936|COL5A2|1290|collagen, type V, alpha 2##AK300146|COL5A2|1290|collagen, type V, alpha 2##M31365|COL5A2|1290|collagen, type V, alpha 2##NM_000393|COL5A2|1290|collagen, type V, alpha 2##BC040567|WDR75|84128|WD repeat domain 75##NM_032168|WDR75|84128|WD repeat domain 75##AK022607|WDR75|84128|WD repeat domain 75##AK290445|WDR75|84128|WD repeat domain 75##CR749440|WDR75|84128|WD repeat domain 75##AK022581|WDR75|84128|WD repeat domain 75##AK091546|WDR75|84128|WD repeat domain 75	0.5326	CTCF.p2:21:0.533
chr2	25351976	25352114	reg1010266.p1	3.893	+	TSC_hg19_v1_chr2_+_25264954 NM_014971 AB023170	-87068	+	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	-157178	-	AK294726 TSC_hg19_v1_chr2_-_25194607	-157500	-	NM_000939 NM_001035256	39513	-	TSC_hg19_v1_chr2_-_25466801 BC018214	114763	-	TSC_hg19_v1_chr2_-_25467080 BC023612	115090	-	NM_014971|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AB023170|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AK294726|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_000939|POMC|5443|proopiomelanocortin##NM_001035256|POMC|5443|proopiomelanocortin##BC018214|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.0	
chr2	42329283	42329408	reg1019428.p1	3.893	+	AB528999 TSC_hg19_v1_chr2_+_42275979	-53384	+	TSC_hg19_v1_chr2_+_42275160 NM_138370	-54213	+	AK124893 NM_001242815	-148403	-	TSC_hg19_v1_chr2_+_42396514 AB275889 NM_001145076 NM_019063 AK314702 BC146799 AF177377 BC067777 BC104647 BC140845 AB374363 AB462412 AB384933	67230	+	AF127788 BT007371 CR542208 CU675543 DQ890566 DQ893729 TSC_hg19_v1_chr2_-_42588354 AB007618 BC005251 BC007095 NM_004718	258988	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	391213	-	NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_001145076|EML4|27436|echinoderm microtubule associated protein like 4##NM_019063|EML4|27436|echinoderm microtubule associated protein like 4##AK314702|EML4|27436|echinoderm microtubule associated protein like 4##BC146799|EML4|27436|echinoderm microtubule associated protein like 4##AF177377|EML4|27436|echinoderm microtubule associated protein like 4##BC067777|EML4|27436|echinoderm microtubule associated protein like 4##BC104647|EML4|27436|echinoderm microtubule associated protein like 4##BC140845|EML4|27436|echinoderm microtubule associated protein like 4##AF127788|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BT007371|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##CR542208|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ890566|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##DQ893729|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB007618|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC005251|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##BC007095|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##NM_004718|COX7A2L|9167|cytochrome c oxidase subunit VIIa polypeptide 2 like##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3	0.029612	
chr3	150421436	150421527	reg1034057.p1	3.893	+	NM_016275 TSC_hg19_v1_chr3_+_150321107 BC006012 AK300315 BC026350 AK075006 AY358095 AF195141 BC008411 BC009611 AY358096 AF131856 BC071699 BC036738 BC009556 CU679417 CU693228 CU691400	-100326	+	BC039424 AK125413 TSC_hg19_v1_chr3_-_150321004	-100505	-	TSC_hg19_v1_chr3_+_150264579 BX647951 AL833101 BC011885 AF497978 AB590213 DQ896788 EU176412 AF172818	-156895	+	AK093375 AX748085 BC036239 BC029577 NM_152394	248	-	TSC_hg19_v1_chr3_-_150480902 AK223565	59418	-	TSC_hg19_v1_chr3_-_150480936 BC013082	59449	-	NM_016275|SELT|51714|selenoprotein T##BC006012|SELT|51714|selenoprotein T##AK300315|SELT|51714|selenoprotein T##BC026350|SELT|51714|selenoprotein T##AK075006|SELT|51714|selenoprotein T##AY358095|SELT|51714|selenoprotein T##AF195141|SELT|51714|selenoprotein T##BC008411|SELT|51714|selenoprotein T##BC009611|SELT|51714|selenoprotein T##AY358096|SELT|51714|selenoprotein T##AF131856|SELT|51714|selenoprotein T##BC071699|SELT|51714|selenoprotein T##BC036738|SELT|51714|selenoprotein T##BC009556|SELT|51714|selenoprotein T##AK125413|SERP1|27230|stress-associated endoplasmic reticulum protein 1##BX647951|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AL833101|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##BC011885|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AF497978|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##DQ896788|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##EU176412|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AF172818|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AK093375|FAM194A|131831|family with sequence similarity 194, member A##BC036239|FAM194A|131831|family with sequence similarity 194, member A##BC029577|FAM194A|131831|family with sequence similarity 194, member A##NM_152394|FAM194A|131831|family with sequence similarity 194, member A##AK223565|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##BC013082|SIAH2|6478|seven in absentia homolog 2 (Drosophila)	0.0	
chr3	17097238	17097418	reg1032535.p2	3.893	+	BC036392 NM_015184	-122747	+	AB029015 NM_001144382	-170877	+	U65918 U66726 U66078 BC027595 NM_001351	-450362	-	AK310539 NM_001134381	644183	-	D86965 NM_014744	685070	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	686839	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.0	
chr10	124739855	124739998	reg1035378.p1	3.892	+	BC035344 NM_153336	-371	+	CU689464 TSC_hg19_v1_chr10_-_124713733 BC032645 AK023552 BC021705 NM_024942	-26121	-	NM_001029888	-69710	+	TSC_hg19_v1_chr10_+_124739927 AK127173	13	+	CR749800 TSC_hg19_v1_chr10_-_124768312 AK226143 AK026626 NM_022466 BX647958 BC022564	28345	-	TSC_hg19_v1_chr10_+_124768471 NM_001609 AK298638	28522	+	BC035344|PSTK|118672|phosphoseryl-tRNA kinase##NM_153336|PSTK|118672|phosphoseryl-tRNA kinase##BC032645|C10orf88|80007|chromosome 10 open reading frame 88##AK023552|C10orf88|80007|chromosome 10 open reading frame 88##BC021705|C10orf88|80007|chromosome 10 open reading frame 88##NM_024942|C10orf88|80007|chromosome 10 open reading frame 88##NM_001029888|FAM24A|118670|family with sequence similarity 24, member A##AK127173|PSTK|118672|phosphoseryl-tRNA kinase##CR749800|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##AK226143|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##AK026626|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##NM_022466|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##BX647958|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##BC022564|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##NM_001609|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK298638|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain	0.028164	
chr10	12659388	12659543	reg1039936.p2	3.892	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-267688	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-267748	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	-267890	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	384234	-	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	482680	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	544103	+	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10	0.0	
chr1	25937533	25937619	reg1036710.p1	3.892	+	TSC_hg19_v1_chr1_+_25870146 BC029770 AL117654 AB528624	-67412	+	TSC_hg19_v1_chr1_+_25870097 AK091219 NM_015627	-67485	+	TSC_hg19_v1_chr1_+_25757387 AK311472 NM_018202 AY845015 BC007687 AK001609 AY845035 AY845036 BC032427 BC020801	-180091	+	AF261655 NM_020379	6382	+	AB209275 TSC_hg19_v1_chr1_+_25944698	7079	+	TSC_hg19_v1_chr1_+_26126678 AJ306399 NM_020451 NM_206926	189092	+	BC029770|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AL117654|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AK091219|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##NM_015627|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AK311472|TMEM57|55219|transmembrane protein 57##NM_018202|TMEM57|55219|transmembrane protein 57##AY845015|TMEM57|55219|transmembrane protein 57##BC007687|TMEM57|55219|transmembrane protein 57##AK001609|TMEM57|55219|transmembrane protein 57##AY845035|TMEM57|55219|transmembrane protein 57##AY845036|TMEM57|55219|transmembrane protein 57##BC032427|TMEM57|55219|transmembrane protein 57##BC020801|TMEM57|55219|transmembrane protein 57##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AB209275|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AJ306399|SEPN1|57190|selenoprotein N, 1##NM_020451|SEPN1|57190|selenoprotein N, 1##NM_206926|SEPN1|57190|selenoprotein N, 1	0.618818	CTCF.p2:-4:0.619
chr13	25439402	25439524	reg1034514.p2	3.892	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	-101144	+	AK292968 NM_001185085 NM_001676	-184915	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	-352552	-	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	57506	-	TSC_hg19_v1_chr13_-_25497054 NM_018451	57606	-	NM_030979 AL136900 AK313336 BC045608 BC027617 AF132026 DQ892103 DQ895297	230842	+	BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J##NM_018451|CENPJ|55835|centromere protein J##NM_030979|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AL136900|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AK313336|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC045608|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##BC027617|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##AF132026|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ892103|PABPC3|5042|poly(A) binding protein, cytoplasmic 3##DQ895297|PABPC3|5042|poly(A) binding protein, cytoplasmic 3	0.511658	CTCF.p2:-9:0.512
chr16	11348853	11348966	reg1011294.p4	3.892	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-310466	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-312674	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-312743	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	1141	-	X63758 BC096135 BC096136 BC096137 NM_005425	14229	-	NM_021247	18542	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr17	4268418	4268597	reg1029885.p1	3.892	+	AB462945 AB033081 TSC_hg19_v1_chr17_-_4167252 AB037360 BC052308 AK025483 AK057047 AK225170 AK292930 BC060812 AK302712 NM_016376 NM_020740	-101356	-	TSC_hg19_v1_chr17_+_4046995 AK313088 AK172844 BC020263 CU690822 DQ891696 DQ894877	-221498	+	TSC_hg19_v1_chr17_+_4046490 NM_144611 BC051697	-222024	+	BT007416 D78514 TSC_hg19_v1_chr17_-_4269807 BC026288	1204	-	TSC_hg19_v1_chr17_-_4269937 AK313059 BC002775 NM_003342	1401	-	AK172832 NM_182538 TSC_hg19_v1_chr17_+_4337247 BC023646	68735	+	AB033081|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AB037360|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC052308|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK025483|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK057047|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK225170|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK292930|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##BC060812|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK302712|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_016376|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##NM_020740|ANKFY1|51479|ankyrin repeat and FYVE domain containing 1##AK313088|CYB5D2|124936|cytochrome b5 domain containing 2##AK172844|CYB5D2|124936|cytochrome b5 domain containing 2##BC020263|CYB5D2|124936|cytochrome b5 domain containing 2##DQ891696|CYB5D2|124936|cytochrome b5 domain containing 2##DQ894877|CYB5D2|124936|cytochrome b5 domain containing 2##NM_144611|CYB5D2|124936|cytochrome b5 domain containing 2##BC051697|CYB5D2|124936|cytochrome b5 domain containing 2##BT007416|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##D78514|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC026288|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AK313059|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##BC002775|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##NM_003342|UBE2G1|7326|ubiquitin-conjugating enzyme E2G 1##AK172832|SPNS3|201305|spinster homolog 3 (Drosophila)##NM_182538|SPNS3|201305|spinster homolog 3 (Drosophila)##BC023646|SPNS3|201305|spinster homolog 3 (Drosophila)	0.20831	CTCF.p2:30:0.208
chr17	46659860	46660030	reg1037550.p2	3.892	+	TSC_hg19_v1_chr17_-_46655544 AL137449 BC049204 NM_024015	-4302	-	NM_002146 AK027609	-8117	-	EU446481 BC074805 BC074806 X16665 NM_002145	-37612	-	AK315102 TSC_hg19_v1_chr17_-_46667604 AK316245 AK291182	7668	-	AB464575 BC117247 NM_002147 TSC_hg19_v1_chr17_-_46671142 AK314964	11155	-	M92299 TSC_hg19_v1_chr17_-_46671405	11422	-	AL137449|HOXB4|3214|homeobox B4##BC049204|HOXB4|3214|homeobox B4##NM_024015|HOXB4|3214|homeobox B4##NM_002146|HOXB3|3213|homeobox B3##AK027609|HOXB3|3213|homeobox B3##EU446481|HOXB2|3212|homeobox B2##BC074805|HOXB2|3212|homeobox B2##BC074806|HOXB2|3212|homeobox B2##X16665|HOXB2|3212|homeobox B2##NM_002145|HOXB2|3212|homeobox B2##AK315102|HOXB3|3213|homeobox B3##AK316245|HOXB3|3213|homeobox B3##AK291182|HOXB3|3213|homeobox B3##BC117247|HOXB5|3215|homeobox B5##NM_002147|HOXB5|3215|homeobox B5##AK314964|HOXB5|3215|homeobox B5##M92299|HOXB5|3215|homeobox B5	0.0	
chr19	15489352	15489450	reg1031438.p1	3.892	+	TSC_hg19_v1_chr19_-_15443351 BC067129 BC091649 BC035266 BC047888	-46071	-	TSC_hg19_v1_chr19_-_15443306 BC038988	-46096	-	BC000156 TSC_hg19_v1_chr19_-_15443139	-46263	-	TSC_hg19_v1_chr19_-_15490599 AK308251 AK303640 BC037270 Y11997 NM_005858	1205	-	DQ891853 DQ895043 TSC_hg19_v1_chr19_-_15529792 AB015332 AB025905 AJ243467 BC000713 AK001594 AK094736 AK225046 AK225291 AK310990	40374	-	TSC_hg19_v1_chr19_-_15529834 NM_014371 AK295956	40433	-	BC067129|BRD4|23476|bromodomain containing 4##BC091649|BRD4|23476|bromodomain containing 4##BC035266|BRD4|23476|bromodomain containing 4##BC047888|BRD4|23476|bromodomain containing 4##BC038988|BRD4|23476|bromodomain containing 4##BC000156|BRD4|23476|bromodomain containing 4##AK308251|AKAP8|10270|A kinase (PRKA) anchor protein 8##AK303640|AKAP8|10270|A kinase (PRKA) anchor protein 8##BC037270|AKAP8|10270|A kinase (PRKA) anchor protein 8##Y11997|AKAP8|10270|A kinase (PRKA) anchor protein 8##NM_005858|AKAP8|10270|A kinase (PRKA) anchor protein 8##DQ891853|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##DQ895043|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AB015332|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AB025905|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AJ243467|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##BC000713|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK001594|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK094736|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK225046|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK225291|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK310990|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##NM_014371|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK295956|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like	0.0	
chr21	38741805	38741937	reg1033198.p2	3.892	+	AF108830 NM_101395 AB015283 AB015284	-2001	+	TSC_hg19_v1_chr21_+_38739208 AB015282	-2625	+	TSC_hg19_v1_chr21_-_38640233 BX648191 BC110655	-101636	-	D86550 NM_130436	49335	+	NM_130438 NM_001396 U52373 D85759 U58496	50749	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	546840	-	AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015282|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##BX648191|DSCR3|10311|Down syndrome critical region gene 3##BC110655|DSCR3|10311|Down syndrome critical region gene 3##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6	0.0	
chr2	20795275	20795384	reg1031245.p1	3.892	+	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-148497	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-244910	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-268196	-	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	55519	-	AF522369 NM_182828	71094	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	227524	-	AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43	0.0	
chr5	66499889	66499958	reg1035063.p1	3.892	+	BC109069 BC109070 D83597 NM_005582 AK313177	-7323	-	AY830839 BC018692 NM_015183	-375320	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-607715	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	1011657	+	TSC_hg19_v1_chr5_+_67511602 BC094795	1011684	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	1084371	+	BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.023381	
chr7	128984352	128984508	reg1033569.p1	3.892	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	-119601	+	BC009989 NM_005631	-155718	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-289225	-	TSC_hg19_v1_chr7_+_129007981 NM_001130723	23556	+	TSC_hg19_v1_chr7_+_129008062 AK025372	23658	+	AK316073 NM_001130722	31053	+	NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2##AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2	0.0	
chr7	827124	827224	reg1032882.p1	3.892	+	BC026734 NM_001164758 NM_001164759	-59875	-	TSC_hg19_v1_chr7_-_766907 NM_001164760	-60248	-	TSC_hg19_v1_chr7_+_766769 AK056233	-60383	+	BC013613 NM_001171946	28019	+	NM_001171944 NM_001171945 NM_025154 TSC_hg19_v1_chr7_+_856279 AK022816 AK302896 AK309120 AK022469 BX538211 BC151827 AB018353 BC152418	29108	+	BC142707 NM_001130965 AB463335 CU680640	44974	+	BC026734|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164758|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164759|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164760|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK056233|HEATR2|54919|HEAT repeat containing 2##BC013613|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171946|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171944|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001171945|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_025154|SUN1|23353|Sad1 and UNC84 domain containing 1##AK022816|SUN1|23353|Sad1 and UNC84 domain containing 1##AK302896|SUN1|23353|Sad1 and UNC84 domain containing 1##AK309120|SUN1|23353|Sad1 and UNC84 domain containing 1##AK022469|SUN1|23353|Sad1 and UNC84 domain containing 1##BX538211|SUN1|23353|Sad1 and UNC84 domain containing 1##BC151827|SUN1|23353|Sad1 and UNC84 domain containing 1##AB018353|SUN1|23353|Sad1 and UNC84 domain containing 1##BC152418|SUN1|23353|Sad1 and UNC84 domain containing 1##BC142707|SUN1|23353|Sad1 and UNC84 domain containing 1##NM_001130965|SUN1|23353|Sad1 and UNC84 domain containing 1	0.073881	
chr1	105421275	105421369	reg1032888.p1	3.891	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-1128820	+	NM_001008221 AK292341	-1129044	+	AK292341 NM_001008221	-1182251	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	2178043	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	2261420	+	AB023193 TSC_hg19_v1_chr1_+_107683657	2262282	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.953097	CTCF.p2:5:0.953
chr11	18656212	18656300	reg1034968.p2	3.891	+	TSC_hg19_v1_chr11_-_18655962 BX647798 NM_194285 AK096760	-256	-	TSC_hg19_v1_chr11_-_18655926 AK304078 BX648478	-315	-	TSC_hg19_v1_chr11_-_18655915 BC056261 BX641102	-351	-	TSC_hg19_v1_chr11_+_18720321 AK074600	64047	+	TSC_hg19_v1_chr11_+_18720347 BC035692 NM_153347	64092	+	BC115396 BC115397 AK095113 NM_173588	91491	-	BX647798|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##NM_194285|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##AK096760|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##AK304078|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##BX648478|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##BC056261|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##BX641102|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##AK074600|TMEM86A|144110|transmembrane protein 86A##BC035692|TMEM86A|144110|transmembrane protein 86A##NM_153347|TMEM86A|144110|transmembrane protein 86A##BC115396|IGSF22|283284|immunoglobulin superfamily, member 22##BC115397|IGSF22|283284|immunoglobulin superfamily, member 22##AK095113|IGSF22|283284|immunoglobulin superfamily, member 22##NM_173588|IGSF22|283284|immunoglobulin superfamily, member 22	0.0	
chr11	60809625	60809709	reg1032039.p1	3.891	+	NM_006725 TSC_hg19_v1_chr11_+_60739236 AK128419 AK312749 BC078669 BC033755 X60992 AK292704 DQ786329 DQ786330 U66142 U66145 U66146	-70442	+	BC037974 BC025710 AF135600 AB020598 NM_016582	-90481	-	TSC_hg19_v1_chr11_+_60691945 NM_017870 NM_178031 AK000546 BC114569 BC032059	-117732	+	NM_014207 AY541703 TSC_hg19_v1_chr11_+_60869960 AK292698 X04391 BC027901 DQ892077 DQ895270	60312	+	BC141827 BC142702 AK097326 TSC_hg19_v1_chr11_-_60928910 NM_017966 AL834261 AK302384	119263	-	NM_001079807 AK301286 AK301293 AK301305 AK312941 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	161341	+	NM_006725|CD6|923|CD6 molecule##AK128419|CD6|923|CD6 molecule##AK312749|CD6|923|CD6 molecule##BC078669|CD6|923|CD6 molecule##BC033755|CD6|923|CD6 molecule##X60992|CD6|923|CD6 molecule##AK292704|CD6|923|CD6 molecule##DQ786329|CD6|923|CD6 molecule##DQ786330|CD6|923|CD6 molecule##U66142|CD6|923|CD6 molecule##U66145|CD6|923|CD6 molecule##U66146|CD6|923|CD6 molecule##BC037974|SLC15A3|51296|solute carrier family 15, member 3##BC025710|SLC15A3|51296|solute carrier family 15, member 3##AF135600|SLC15A3|51296|solute carrier family 15, member 3##AB020598|SLC15A3|51296|solute carrier family 15, member 3##NM_016582|SLC15A3|51296|solute carrier family 15, member 3##NM_017870|TMEM132A|54972|transmembrane protein 132A##NM_178031|TMEM132A|54972|transmembrane protein 132A##AK000546|TMEM132A|54972|transmembrane protein 132A##BC114569|TMEM132A|54972|transmembrane protein 132A##BC032059|TMEM132A|54972|transmembrane protein 132A##NM_014207|CD5|921|CD5 molecule##AY541703|CD5|921|CD5 molecule##AK292698|CD5|921|CD5 molecule##X04391|CD5|921|CD5 molecule##BC027901|CD5|921|CD5 molecule##DQ892077|CD5|921|CD5 molecule##DQ895270|CD5|921|CD5 molecule##BC141827|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##BC142702|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK097326|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_017966|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AL834261|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK302384|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_001079807|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301286|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301293|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)	0.0	
chr12	42877626	42877708	reg1012907.p4	3.891	+	TSC_hg19_v1_chr12_-_42877418 AK122877 NM_001144881	-251	-	AK129910 AK303612 NM_001143787 NM_001143788 NM_001143789 NM_016488 NM_201438 NM_201439 NM_201440 NM_201515 TSC_hg19_v1_chr12_+_42719974 AY157850 AK055690 AK056622 AK299951 AY039238 AK303680 AF151066 AK308022 AK299682 BC015322 BC025306 BC039832 BC040449 AF151040 BC033753	-157689	+	AK308244 TSC_hg19_v1_chr12_-_42719921 BC005099 BC010177 BC022543 AB062361 NM_033114	-157792	-	AK122881 TSC_hg19_v1_chr12_-_42877772	91	-	TSC_hg19_v1_chr12_-_42877811 NM_001144882 NM_001144883	132	-	BC114939 BC114940 AF399844 AF543759 AF543760 AK056499 TSC_hg19_v1_chr12_-_42983549 NM_153026	105825	-	AK122877|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK129910|PPHLN1|51535|periphilin 1##AK303612|PPHLN1|51535|periphilin 1##NM_001143787|PPHLN1|51535|periphilin 1##NM_001143788|PPHLN1|51535|periphilin 1##NM_001143789|PPHLN1|51535|periphilin 1##NM_016488|PPHLN1|51535|periphilin 1##NM_201438|PPHLN1|51535|periphilin 1##NM_201439|PPHLN1|51535|periphilin 1##NM_201440|PPHLN1|51535|periphilin 1##NM_201515|PPHLN1|51535|periphilin 1##AY157850|PPHLN1|51535|periphilin 1##AK055690|PPHLN1|51535|periphilin 1##AK056622|PPHLN1|51535|periphilin 1##AK299951|PPHLN1|51535|periphilin 1##AY039238|PPHLN1|51535|periphilin 1##AK303680|PPHLN1|51535|periphilin 1##AF151066|PPHLN1|51535|periphilin 1##AK308022|PPHLN1|51535|periphilin 1##BC015322|PPHLN1|51535|periphilin 1##BC025306|PPHLN1|51535|periphilin 1##BC039832|PPHLN1|51535|periphilin 1##BC040449|PPHLN1|51535|periphilin 1##AF151040|PPHLN1|51535|periphilin 1##AK308244|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC005099|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC010177|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC022543|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##AB062361|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##NM_033114|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)##BC114939|PRICKLE1|144165|prickle homolog 1 (Drosophila)##BC114940|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF399844|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543759|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543760|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK056499|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_153026|PRICKLE1|144165|prickle homolog 1 (Drosophila)	0.0	
chr12	53264164	53264344	reg1007292.p1	3.891	+	AB463817 AX721217 AK298636 AK096419 AK290901 NM_173352	-21508	-	AJ564105 BC063648 NM_175834 BC039148	-36185	-	CU692074 EU832356 EU832441 BC042174 X67683 BC012867 AK098110 AK296582 AK299394 AK299400 AK299451 AK307941 NM_002272	-56383	-	CU687300 AB528612 AM392826 AM392892 DQ892637 DQ895875 U76549 M34225 M26512 BC075839 BC073760 X74929 BC000654 Z36777 BC063513 TSC_hg19_v1_chr12_-_53298839 AK222941 D28446 NM_002273	34562	-	NM_199187 AK308506	78407	+	NM_000224 TSC_hg19_v1_chr12_+_53342874	78607	+	AK298636|KRT78|196374|keratin 78##AK096419|KRT78|196374|keratin 78##AK290901|KRT78|196374|keratin 78##NM_173352|KRT78|196374|keratin 78##AJ564105|KRT79|338785|keratin 79##BC063648|KRT79|338785|keratin 79##NM_175834|KRT79|338785|keratin 79##BC039148|KRT79|338785|keratin 79##EU832356|KRT4|3851|keratin 4##EU832441|KRT4|3851|keratin 4##BC042174|KRT4|3851|keratin 4##X67683|KRT4|3851|keratin 4##BC012867|KRT4|3851|keratin 4##AK098110|KRT4|3851|keratin 4##AK296582|KRT4|3851|keratin 4##AK299394|KRT4|3851|keratin 4##AK299400|KRT4|3851|keratin 4##AK299451|KRT4|3851|keratin 4##AK307941|KRT4|3851|keratin 4##NM_002272|KRT4|3851|keratin 4##AM392826|KRT8|3856|keratin 8##AM392892|KRT8|3856|keratin 8##DQ892637|KRT8|3856|keratin 8##DQ895875|KRT8|3856|keratin 8##U76549|KRT8|3856|keratin 8##M34225|KRT8|3856|keratin 8##M26512|KRT8|3856|keratin 8##BC075839|KRT8|3856|keratin 8##BC073760|KRT8|3856|keratin 8##X74929|KRT8|3856|keratin 8##BC000654|KRT8|3856|keratin 8##Z36777|KRT8|3856|keratin 8##BC063513|KRT8|3856|keratin 8##AK222941|KRT8|3856|keratin 8##NM_002273|KRT8|3856|keratin 8##NM_199187|KRT18|3875|keratin 18##AK308506|KRT18|3875|keratin 18##NM_000224|KRT18|3875|keratin 18	0.0	
chr14	89396500	89396614	reg1035744.p1	3.891	+	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-105564	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-137347	-	NM_207662 BC027607 AF474376	-335804	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	482219	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	486853	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	689038	-	AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3	0.055633	
chr16	11194352	11194436	reg1026618.p2	3.891	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-155951	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-158159	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-158228	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	155656	-	X63758 BC096135 BC096136 BC096137 NM_005425	168744	-	NM_021247	173057	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr17	8906280	8906399	reg1034009.p2	3.891	+	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	-37358	-	AY725853 AF128881 NM_014308	-90523	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-135355	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	18628	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	572792	-	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	572867	-	AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8	0.117663	
chr19	10908227	10908384	reg1034913.p1	3.891	+	TSC_hg19_v1_chr19_+_10828827 BC039596 AK289831	-79446	+	TSC_hg19_v1_chr19_+_10828773 L36983	-79533	+	TSC_hg19_v1_chr19_+_10828765 BC054501	-79538	+	AB528501 DQ892640 DQ895878 BC002443 BC018831 TSC_hg19_v1_chr19_-_10946889 U41804 NM_006858	38619	-	BC157863 NM_001136482	50800	+	TSC_hg19_v1_chr19_+_10982255 NM_199141	73945	+	BC039596|DNM2|1785|dynamin 2##AK289831|DNM2|1785|dynamin 2##L36983|DNM2|1785|dynamin 2##BC054501|DNM2|1785|dynamin 2##DQ892640|TMED1|11018|transmembrane emp24 protein transport domain containing 1##DQ895878|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC002443|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC018831|TMED1|11018|transmembrane emp24 protein transport domain containing 1##U41804|TMED1|11018|transmembrane emp24 protein transport domain containing 1##NM_006858|TMED1|11018|transmembrane emp24 protein transport domain containing 1##BC157863|C19orf38|255809|chromosome 19 open reading frame 38##NM_001136482|C19orf38|255809|chromosome 19 open reading frame 38##NM_199141|CARM1|10498|coactivator-associated arginine methyltransferase 1	0.0	
chr19	6738258	6738438	reg1004503.p1	3.891	+	TSC_hg19_v1_chr19_-_6737615 BC146909 AX775899 NM_001080452	-730	-	TSC_hg19_v1_chr19_-_6737592 AK291968	-753	-	AL365404 TSC_hg19_v1_chr19_-_6737583	-773	-	TSC_hg19_v1_chr19_+_6739712 NM_004240 AK313296 AB007845 AB072596 AK223109 AF502289 AJ000414 AY081141 BC013002 CU680464 DQ892747 DQ895993 AF380114 BT006698 BT020167 BT020171 CR536513	1386	+	TSC_hg19_v1_chr19_-_6767447 AK225386 AK292781 AK299406 AK310659 BC006281 AF124249 AY358406 NM_005490 AK290293	29159	-	TSC_hg19_v1_chr19_+_6772718 NM_005428 AK225710 AK313307	34376	+	BC146909|GPR108|56927|G protein-coupled receptor 108##AX775899|GPR108|56927|G protein-coupled receptor 108##NM_001080452|GPR108|56927|G protein-coupled receptor 108##AK291968|GPR108|56927|G protein-coupled receptor 108##AL365404|GPR108|56927|G protein-coupled receptor 108##NM_004240|TRIP10|9322|thyroid hormone receptor interactor 10##AK313296|TRIP10|9322|thyroid hormone receptor interactor 10##AB007845|TRIP10|9322|thyroid hormone receptor interactor 10##AB072596|TRIP10|9322|thyroid hormone receptor interactor 10##AK223109|TRIP10|9322|thyroid hormone receptor interactor 10##AF502289|TRIP10|9322|thyroid hormone receptor interactor 10##AJ000414|TRIP10|9322|thyroid hormone receptor interactor 10##AY081141|TRIP10|9322|thyroid hormone receptor interactor 10##BC013002|TRIP10|9322|thyroid hormone receptor interactor 10##DQ892747|TRIP10|9322|thyroid hormone receptor interactor 10##DQ895993|TRIP10|9322|thyroid hormone receptor interactor 10##AF380114|TRIP10|9322|thyroid hormone receptor interactor 10##BT006698|TRIP10|9322|thyroid hormone receptor interactor 10##BT020167|TRIP10|9322|thyroid hormone receptor interactor 10##BT020171|TRIP10|9322|thyroid hormone receptor interactor 10##CR536513|TRIP10|9322|thyroid hormone receptor interactor 10##AK225386|SH2D3A|10045|SH2 domain containing 3A##AK292781|SH2D3A|10045|SH2 domain containing 3A##AK299406|SH2D3A|10045|SH2 domain containing 3A##AK310659|SH2D3A|10045|SH2 domain containing 3A##BC006281|SH2D3A|10045|SH2 domain containing 3A##AF124249|SH2D3A|10045|SH2 domain containing 3A##AY358406|SH2D3A|10045|SH2 domain containing 3A##NM_005490|SH2D3A|10045|SH2 domain containing 3A##AK290293|SH2D3A|10045|SH2 domain containing 3A##NM_005428|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK225710|VAV1|7409|vav 1 guanine nucleotide exchange factor##AK313307|VAV1|7409|vav 1 guanine nucleotide exchange factor	0.0	
chr6	149639904	149639986	reg1035767.p1	3.891	+	AK315038 NM_015093 AK307650	-504	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	-842	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-571736	+	AY340238 NM_001002255 BC130305 HQ258040	81563	+	TSC_hg19_v1_chr6_-_149806031 AK127932	166122	-	TSC_hg19_v1_chr6_-_149806151 AB458221 AB458222 BC157832 NM_207360	166198	-	AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_005715|UST|10090|uronyl-2-sulfotransferase##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##AK127932|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AB458221|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AB458222|ZC3H12D|340152|zinc finger CCCH-type containing 12D##BC157832|ZC3H12D|340152|zinc finger CCCH-type containing 12D##NM_207360|ZC3H12D|340152|zinc finger CCCH-type containing 12D	0.0	
chr6	37992245	37992377	reg1035212.p1	3.891	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	-204621	+	TSC_hg19_v1_chr6_+_37787274 NM_021943	-205021	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	-326605	-	BC101354 BC101355 BC101356 BC101357 AK057507 NM_001172418 NM_152733	571491	-	AB067467 TSC_hg19_v1_chr6_-_38607611	615294	-	TSC_hg19_v1_chr6_-_38607697 BX537534	615355	-	AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##BC101354|BTBD9|114781|BTB (POZ) domain containing 9##BC101355|BTBD9|114781|BTB (POZ) domain containing 9##BC101356|BTBD9|114781|BTB (POZ) domain containing 9##BC101357|BTBD9|114781|BTB (POZ) domain containing 9##AK057507|BTBD9|114781|BTB (POZ) domain containing 9##NM_001172418|BTBD9|114781|BTB (POZ) domain containing 9##NM_152733|BTBD9|114781|BTB (POZ) domain containing 9##AB067467|BTBD9|114781|BTB (POZ) domain containing 9##BX537534|BTBD9|114781|BTB (POZ) domain containing 9	0.995265	CTCF.p2:1:0.995
chr9	20553237	20553333	reg1028874.p2	3.891	+	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-766334	-	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-1144282	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-1173058	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	69163	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	69211	-	AK056522 AY139834 NM_017794	105022	+	BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797	0.114098	
chr10	103057724	103057857	reg1032948.p1	3.890	+	BC136321 BC069156 NM_006562 X90828	-69088	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-166612	+	BC019674 NM_001085398	-166888	-	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	56082	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	290139	-	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	290219	-	BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda	0.0	
chr1	200849572	200849700	reg1032504.p2	3.890	+	BC126386 BC126388 AK315339 NM_005298	-7513	+	TSC_hg19_v1_chr1_+_200708732 AK095640 NM_203459	-140965	+	TSC_hg19_v1_chr1_-_200639091 BC041801 NM_001031725	-210528	-	TSC_hg19_v1_chr1_+_200860668 NM_018265 AK001583 AK001763 BC106877	11010	+	AK316510 NM_001142569 TSC_hg19_v1_chr1_+_200864027 AK303885	14361	+	AM177180 AB527174 BC137281 BC144557 TSC_hg19_v1_chr1_-_200992598	142918	-	BC126386|GPR25|2848|G protein-coupled receptor 25##BC126388|GPR25|2848|G protein-coupled receptor 25##AK315339|GPR25|2848|G protein-coupled receptor 25##NM_005298|GPR25|2848|G protein-coupled receptor 25##AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##BC041801|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_001031725|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_018265|C1orf106|55765|chromosome 1 open reading frame 106##AK001583|C1orf106|55765|chromosome 1 open reading frame 106##AK001763|C1orf106|55765|chromosome 1 open reading frame 106##BC106877|C1orf106|55765|chromosome 1 open reading frame 106##AK316510|C1orf106|55765|chromosome 1 open reading frame 106##NM_001142569|C1orf106|55765|chromosome 1 open reading frame 106##AK303885|C1orf106|55765|chromosome 1 open reading frame 106##AM177180|KIF21B|23046|kinesin family member 21B##BC137281|KIF21B|23046|kinesin family member 21B##BC144557|KIF21B|23046|kinesin family member 21B	0.0	
chr1	28190922	28191102	reg1030780.p2	3.890	+	AF126488 AX775985 TSC_hg19_v1_chr1_+_28157335 AK313814 AB464098 U14575	-33671	+	TSC_hg19_v1_chr1_+_28157334 AF061958 AK292077 AK297771 AK304619 NM_002713 NM_138558 AK307570 BC093017	-33684	+	NM_014110 TSC_hg19_v1_chr1_+_28157314	-33726	+	CR749321 BC132692 BC133049 NM_001039477 NM_001105556 NM_004848 TSC_hg19_v1_chr1_+_28199054 AK303141 HQ258751 BC031655 AK303090	8060	+	CR450348 DQ892352 DQ895821 TSC_hg19_v1_chr1_-_28241083 J05249 BC001630 AK300691 AK312956 AK296898 AK298759 BC012157	50037	-	TSC_hg19_v1_chr1_-_28241258 BC021257 NM_002946	50252	-	AF126488|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AX775985|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK313814|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##U14575|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AF061958|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK292077|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK297771|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK304619|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_002713|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_138558|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK307570|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##BC093017|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_014110|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##CR749321|C1orf38|9473|chromosome 1 open reading frame 38##BC132692|C1orf38|9473|chromosome 1 open reading frame 38##BC133049|C1orf38|9473|chromosome 1 open reading frame 38##NM_001039477|C1orf38|9473|chromosome 1 open reading frame 38##NM_001105556|C1orf38|9473|chromosome 1 open reading frame 38##NM_004848|C1orf38|9473|chromosome 1 open reading frame 38##AK303141|C1orf38|9473|chromosome 1 open reading frame 38##HQ258751|C1orf38|9473|chromosome 1 open reading frame 38##BC031655|C1orf38|9473|chromosome 1 open reading frame 38##AK303090|C1orf38|9473|chromosome 1 open reading frame 38##CR450348|RPA2|6118|replication protein A2, 32kDa##DQ892352|RPA2|6118|replication protein A2, 32kDa##DQ895821|RPA2|6118|replication protein A2, 32kDa##J05249|RPA2|6118|replication protein A2, 32kDa##BC001630|RPA2|6118|replication protein A2, 32kDa##AK300691|RPA2|6118|replication protein A2, 32kDa##AK312956|RPA2|6118|replication protein A2, 32kDa##AK298759|RPA2|6118|replication protein A2, 32kDa##BC012157|RPA2|6118|replication protein A2, 32kDa##BC021257|RPA2|6118|replication protein A2, 32kDa##NM_002946|RPA2|6118|replication protein A2, 32kDa	0.0	
chr14	23288478	23288659	reg1029493.p1	3.890	+	AB020532 BX161519 NM_001126105	-3510	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	-3936	-	TSC_hg19_v1_chr14_-_23284568 AK025377	-3989	-	Y18474 BX248291 AF092032 AJ130718 NM_001126106	397	-	TSC_hg19_v1_chr14_+_23299095 AK096946 NM_178336 NM_180982 NM_181304 NM_181305 NM_181306 NM_181307	10523	+	TSC_hg19_v1_chr14_+_23299104 AK292011 AK000450 BX248749 BC055381 BC068070	10542	+	AB020532|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX161519|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126105|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK025377|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK096946|MRPL52|122704|mitochondrial ribosomal protein L52##NM_178336|MRPL52|122704|mitochondrial ribosomal protein L52##NM_180982|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181304|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181305|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181306|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181307|MRPL52|122704|mitochondrial ribosomal protein L52##AK292011|MRPL52|122704|mitochondrial ribosomal protein L52##AK000450|MRPL52|122704|mitochondrial ribosomal protein L52##BX248749|MRPL52|122704|mitochondrial ribosomal protein L52##BC055381|MRPL52|122704|mitochondrial ribosomal protein L52##BC068070|MRPL52|122704|mitochondrial ribosomal protein L52	0.0	
chr5	175300166	175300234	reg1033926.p1	3.890	+	TSC_hg19_v1_chr5_+_175298607 AK293819	-1590	+	TSC_hg19_v1_chr5_+_175298551 AK314177	-1655	+	TSC_hg19_v1_chr5_+_175298517 AY576870 NM_001008220 AK124837	-1691	+	TSC_hg19_v1_chr5_+_175308843 AL512758 AK126590	8725	+	TSC_hg19_v1_chr5_-_175395273 BC068499 BC066325 BC006849	94952	-	NM_032361	95344	-	AK293819|CPLX2|10814|complexin 2##AK314177|CPLX2|10814|complexin 2##AY576870|CPLX2|10814|complexin 2##NM_001008220|CPLX2|10814|complexin 2##AK124837|CPLX2|10814|complexin 2##AL512758|CPLX2|10814|complexin 2##AK126590|CPLX2|10814|complexin 2##BC068499|THOC3|84321|THO complex 3##BC066325|THOC3|84321|THO complex 3##BC006849|THOC3|84321|THO complex 3##NM_032361|THOC3|84321|THO complex 3	0.614623	CTCF.p2:-11:0.615
chr8	128300465	128300616	reg1030112.p1	3.890	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-729816	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-729985	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1337127	-	DQ486513 NM_001159542	127316	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	447785	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	447950	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.0	
chr8	82214887	82215010	reg1040744.p2	3.890	+	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	-22175	+	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	-190634	-	AK131274 NM_001033723	-427933	-	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	144721	-	AB528797 NM_001080526	158809	-	AB590738 BT006809 CR456903 J02874 TSC_hg19_v1_chr8_-_82395472 BC003672 NM_001442	180490	-	NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2##NM_001080526|FABP9|646480|fatty acid binding protein 9, testis##BT006809|FABP4|2167|fatty acid binding protein 4, adipocyte##CR456903|FABP4|2167|fatty acid binding protein 4, adipocyte##J02874|FABP4|2167|fatty acid binding protein 4, adipocyte##BC003672|FABP4|2167|fatty acid binding protein 4, adipocyte##NM_001442|FABP4|2167|fatty acid binding protein 4, adipocyte	0.466975	CTCF.p2:-10:0.467
chr8	96745558	96745641	reg1035541.p2	3.890	+	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	-464134	-	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	-464548	+	TSC_hg19_v1_chr8_+_96146116 AK023249	-599463	+	BC127948 BC127947 AJ537424 NM_001001557	427382	-	CR542176 CR542196 TSC_hg19_v1_chr8_-_97247774 AK307085 NM_001199975 BC041005 AK295007 AK311756 M22348 X13585 M26700 BC005230 NM_006294	502210	-	BC012995 NM_015942 TSC_hg19_v1_chr8_-_97273837 AK309002	528218	-	BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6##CR542176|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##CR542196|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK307085|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_001199975|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC041005|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK295007|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##AK311756|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M22348|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##X13585|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##M26700|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC005230|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##NM_006294|UQCRB|7381|ubiquinol-cytochrome c reductase binding protein##BC012995|MTERFD1|51001|MTERF domain containing 1##NM_015942|MTERFD1|51001|MTERF domain containing 1##AK309002|MTERFD1|51001|MTERF domain containing 1	0.801887	CTCF.p2:19:0.802
chr1	1440385	1440526	reg1014428.p1	3.889	+	TSC_hg19_v1_chr1_+_1407160 NM_031921 AF343078 BC002542 BC018701	-33272	+	AK097309 TSC_hg19_v1_chr1_+_1407157	-33298	+	TSC_hg19_v1_chr1_+_1407144 AK290586	-33321	+	TSC_hg19_v1_chr1_+_1447528 NM_001170535 NM_018188 BC014101	7058	+	TSC_hg19_v1_chr1_+_1447544 AK001571 AK091144 AX746805 BC011814 BC033109 BC007803 BC063607 AF343078 GU189416	7122	+	TSC_hg19_v1_chr1_+_1447871 AK056099 NM_001170536	7435	+	NM_031921|ATAD3B|83858|ATPase family, AAA domain containing 3B##AF343078|ATAD3B|83858|ATPase family, AAA domain containing 3B##BC002542|ATAD3B|83858|ATPase family, AAA domain containing 3B##BC018701|ATAD3B|83858|ATPase family, AAA domain containing 3B##AK290586|ATAD3B|83858|ATPase family, AAA domain containing 3B##NM_001170535|ATAD3A|55210|ATPase family, AAA domain containing 3A##NM_018188|ATAD3A|55210|ATPase family, AAA domain containing 3A##BC014101|ATAD3A|55210|ATPase family, AAA domain containing 3A##AK001571|ATAD3A|55210|ATPase family, AAA domain containing 3A##AK091144|ATAD3A|55210|ATPase family, AAA domain containing 3A##BC011814|ATAD3A|55210|ATPase family, AAA domain containing 3A##BC033109|ATAD3A|55210|ATPase family, AAA domain containing 3A##BC007803|ATAD3A|55210|ATPase family, AAA domain containing 3A##BC063607|ATAD3A|55210|ATPase family, AAA domain containing 3A##AF343078|ATAD3B|83858|ATPase family, AAA domain containing 3B##GU189416|ATAD3A|55210|ATPase family, AAA domain containing 3A##AK056099|ATAD3A|55210|ATPase family, AAA domain containing 3A##NM_001170536|ATAD3A|55210|ATPase family, AAA domain containing 3A	0.089381	
chr1	150138136	150138277	reg1007551.p1	3.889	+	TSC_hg19_v1_chr1_+_150122415 AB464030 AK222921 CU679641 DQ893381 DQ896780 AF073836	-15768	+	TSC_hg19_v1_chr1_+_150122268 AF217956 AF168676 BC010149	-15902	+	TSC_hg19_v1_chr1_+_150122120 AK302255 AF192912 AF291105 NM_016274	-16074	+	AK095228 NM_001136479	68819	-	AB528764 AM393076 AL833660 TSC_hg19_v1_chr1_-_150208332 AK303333 BC003380 AL832664 AK303392 AK223469	70061	-	AY057381 TSC_hg19_v1_chr1_-_150208461 AK092672 AX747663	70245	-	AK222921|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ893381|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ896780|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF073836|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF217956|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF168676|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##BC010149|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AK302255|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF192912|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF291105|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##NM_016274|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AK095228|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##NM_001136479|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AM393076|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL833660|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303333|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##BC003380|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL832664|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303392|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK223469|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AY057381|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK092672|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	0.0	
chr1	160430369	160430435	reg1031814.p2	3.889	+	NM_020335 TSC_hg19_v1_chr1_+_160370394	-60023	+	M96739 AK313700 NM_005598 BC013789	-93538	+	NM_001098398 NM_004371 U24105	-116999	-	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	62627	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	118845	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	118886	-	NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##NM_001098398|COPA|1314|coatomer protein complex, subunit alpha##NM_004371|COPA|1314|coatomer protein complex, subunit alpha##U24105|COPA|1314|coatomer protein complex, subunit alpha##AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule	0.0	
chr11	82701054	82701154	reg1039342.p1	3.889	+	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	-88330	+	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	-89587	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	-256206	-	AK312323 TSC_hg19_v1_chr11_-_82782872	81769	-	BC014213 NM_014488 TSC_hg19_v1_chr11_-_82782897 BX641138	81793	-	BC031316 TSC_hg19_v1_chr11_+_82783118	82014	+	NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AK312323|RAB30|27314|RAB30, member RAS oncogene family##BC014213|RAB30|27314|RAB30, member RAS oncogene family##NM_014488|RAB30|27314|RAB30, member RAS oncogene family##BX641138|RAB30|27314|RAB30, member RAS oncogene family##BC031316|LOC100506233|100506233|uncharacterized LOC100506233	0.0	
chr12	26427863	26428044	reg1026061.p2	3.889	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-79368	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-79662	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	-150032	-	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	558127	-	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	662956	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	663277	-	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)	0.0	
chr1	234978992	234979172	reg1025309.p2	3.889	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-83308	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-233836	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-235224	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	313007	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	313149	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	345481	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr18	74781515	74781660	reg1032840.p1	3.889	+	TSC_hg19_v1_chr18_-_74729052 AK314553 NM_001025081 NM_001025090 NM_001025092 NM_002385 AK293922	-52520	-	CR536534 CR541919 TSC_hg19_v1_chr18_-_74729012 AK296492 M30515 M30516 BC008749 BC101771 BC101773 BC143348 BC143350 M30047 BC080654 M13577 AK289893 AK098402 AK128788 CR627018 AK128770 BC068550	-52592	-	AK074315 TSC_hg19_v1_chr18_-_74728814	-52831	-	TSC_hg19_v1_chr18_-_74844720 BC065248 AB208986 L18865	63130	-	TSC_hg19_v1_chr18_-_74844774 NM_001025100 NM_001025101	63192	-	TSC_hg19_v1_chr18_+_74961925 NM_001480	180379	+	AK314553|MBP|4155|myelin basic protein##NM_001025081|MBP|4155|myelin basic protein##NM_001025090|MBP|4155|myelin basic protein##NM_001025092|MBP|4155|myelin basic protein##NM_002385|MBP|4155|myelin basic protein##AK293922|MBP|4155|myelin basic protein##CR536534|MBP|4155|myelin basic protein##CR541919|MBP|4155|myelin basic protein##M30515|MBP|4155|myelin basic protein##M30516|MBP|4155|myelin basic protein##BC008749|MBP|4155|myelin basic protein##BC101771|MBP|4155|myelin basic protein##BC101773|MBP|4155|myelin basic protein##BC143348|MBP|4155|myelin basic protein##BC143350|MBP|4155|myelin basic protein##M30047|MBP|4155|myelin basic protein##BC080654|MBP|4155|myelin basic protein##M13577|MBP|4155|myelin basic protein##AK289893|MBP|4155|myelin basic protein##AK098402|MBP|4155|myelin basic protein##AK128788|MBP|4155|myelin basic protein##CR627018|MBP|4155|myelin basic protein##AK128770|MBP|4155|myelin basic protein##BC068550|MBP|4155|myelin basic protein##AK074315|MBP|4155|myelin basic protein##BC065248|MBP|4155|myelin basic protein##AB208986|MBP|4155|myelin basic protein##L18865|MBP|4155|myelin basic protein##NM_001025100|MBP|4155|myelin basic protein##NM_001025101|MBP|4155|myelin basic protein##NM_001480|GALR1|2587|galanin receptor 1	0.0	
chr5	131826390	131826475	reg1033882.p2	3.889	+	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-79804	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-120924	+	BX538252 TSC_hg19_v1_chr5_-_131705330	-121133	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	49	-	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	52760	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	66208	+	AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BX538252|LOC553103|553103|uncharacterized LOC553103##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)	0.0	
chr6	11044790	11044885	reg1039655.p1	3.889	+	TSC_hg19_v1_chr6_-_11044539 AK000341 BC060809 BC050278 NM_017770	-257	-	AK128130 NM_001040274	-157774	+	AF091149 BC069603 AF079550 BC117316 BC117318 NM_004752	-162758	-	TSC_hg19_v1_chr6_+_11094066 AK058186	49220	+	BC032356 NM_001135575 TSC_hg19_v1_chr6_+_11094342	49466	+	AK123938 BC068585 NM_207582	67175	-	AK000341|ELOVL2|54898|ELOVL fatty acid elongase 2##BC060809|ELOVL2|54898|ELOVL fatty acid elongase 2##BC050278|ELOVL2|54898|ELOVL fatty acid elongase 2##NM_017770|ELOVL2|54898|ELOVL fatty acid elongase 2##AK128130|SYCP2L|221711|synaptonemal complex protein 2-like##NM_001040274|SYCP2L|221711|synaptonemal complex protein 2-like##AF091149|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC069603|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AF079550|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117316|GCM2|9247|glial cells missing homolog 2 (Drosophila)##BC117318|GCM2|9247|glial cells missing homolog 2 (Drosophila)##NM_004752|GCM2|9247|glial cells missing homolog 2 (Drosophila)##AK058186|C6orf228|221710|chromosome 6 open reading frame 228##BC032356|C6orf228|221710|chromosome 6 open reading frame 228##NM_001135575|C6orf228|221710|chromosome 6 open reading frame 228##AK123938|ERVFRD-1|405754|endogenous retrovirus group FRD, member 1##BC068585|ERVFRD-1|405754|endogenous retrovirus group FRD, member 1##NM_207582|ERVFRD-1|405754|endogenous retrovirus group FRD, member 1	1.225842	CTCF.p2:-7:0.400	CTCF.p2:-48:0.826
chr6	149556591	149556664	reg1033160.p2	3.889	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-488418	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-892436	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-892637	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	82476	+	AK315038 NM_015093 AK307650	82814	+	AY340238 NM_001002255 BC130305 HQ258040	164881	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr6	41418956	41419077	reg1040355.p1	3.889	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-115450	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-164592	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-222948	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	95143	+	TSC_hg19_v1_chr6_+_41514342 BC052803	95321	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	187206	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	0.333368	CTCF.p2:-6:0.333
chr6	91986199	91986309	reg1037895.p1	3.889	+	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-689416	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-689571	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-979642	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	2142929	-	TSC_hg19_v1_chr6_-_96025325 BC047582	4039035	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	4039147	+	BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha	1.004668	CTCF.p2:-8:0.993
chr14	51203942	51204123	reg1027737.p2	3.888	+	TSC_hg19_v1_chr14_-_51135048 AK225896 AK095903	-68964	-	BC020537 TSC_hg19_v1_chr14_-_51135025 BC006385 NM_021818 AK021500	-69006	-	AJ292969 AK023071 TSC_hg19_v1_chr14_-_51135016 AK290883	-69092	-	AB046785 TSC_hg19_v1_chr14_-_51297860 BC065521 AF223937 AF223938 AF223939 AF302773 AY736182 NM_016350 NM_020921 NM_182944 NM_182946	93788	-	AY311396 AY311397 AY311398 AY311399 BC107141 NM_001206673 NM_181814 BC107142 AK128464	134846	+	AF046785 AF066858 TSC_hg19_v1_chr14_-_51411202 AK313206 Y15233 AK309333 BC065011 BC110791 BC009895 BC082229 AK225904 AK300580 BC095850 M14636 NM_001163940 NM_002863	207150	-	AK225896|SAV1|60485|salvador homolog 1 (Drosophila)##AK095903|SAV1|60485|salvador homolog 1 (Drosophila)##BC020537|SAV1|60485|salvador homolog 1 (Drosophila)##BC006385|SAV1|60485|salvador homolog 1 (Drosophila)##NM_021818|SAV1|60485|salvador homolog 1 (Drosophila)##AK021500|SAV1|60485|salvador homolog 1 (Drosophila)##AJ292969|SAV1|60485|salvador homolog 1 (Drosophila)##AK023071|SAV1|60485|salvador homolog 1 (Drosophila)##AK290883|SAV1|60485|salvador homolog 1 (Drosophila)##AB046785|NIN|51199|ninein (GSK3B interacting protein)##BC065521|NIN|51199|ninein (GSK3B interacting protein)##AF223937|NIN|51199|ninein (GSK3B interacting protein)##AF223938|NIN|51199|ninein (GSK3B interacting protein)##AF223939|NIN|51199|ninein (GSK3B interacting protein)##AF302773|NIN|51199|ninein (GSK3B interacting protein)##AY736182|NIN|51199|ninein (GSK3B interacting protein)##NM_016350|NIN|51199|ninein (GSK3B interacting protein)##NM_020921|NIN|51199|ninein (GSK3B interacting protein)##NM_182944|NIN|51199|ninein (GSK3B interacting protein)##NM_182946|NIN|51199|ninein (GSK3B interacting protein)##AY311396|ABHD12B|145447|abhydrolase domain containing 12B##AY311397|ABHD12B|145447|abhydrolase domain containing 12B##AY311398|ABHD12B|145447|abhydrolase domain containing 12B##AY311399|ABHD12B|145447|abhydrolase domain containing 12B##BC107141|ABHD12B|145447|abhydrolase domain containing 12B##NM_001206673|ABHD12B|145447|abhydrolase domain containing 12B##NM_181814|ABHD12B|145447|abhydrolase domain containing 12B##BC107142|ABHD12B|145447|abhydrolase domain containing 12B##AK128464|ABHD12B|145447|abhydrolase domain containing 12B##AF046785|PYGL|5836|phosphorylase, glycogen, liver##AF066858|PYGL|5836|phosphorylase, glycogen, liver##AK313206|PYGL|5836|phosphorylase, glycogen, liver##Y15233|PYGL|5836|phosphorylase, glycogen, liver##AK309333|PYGL|5836|phosphorylase, glycogen, liver##BC065011|PYGL|5836|phosphorylase, glycogen, liver##BC110791|PYGL|5836|phosphorylase, glycogen, liver##BC009895|PYGL|5836|phosphorylase, glycogen, liver##BC082229|PYGL|5836|phosphorylase, glycogen, liver##AK225904|PYGL|5836|phosphorylase, glycogen, liver##AK300580|PYGL|5836|phosphorylase, glycogen, liver##BC095850|PYGL|5836|phosphorylase, glycogen, liver##M14636|PYGL|5836|phosphorylase, glycogen, liver##NM_001163940|PYGL|5836|phosphorylase, glycogen, liver##NM_002863|PYGL|5836|phosphorylase, glycogen, liver	0.0	
chr17	45364057	45364238	reg1028835.p2	3.888	+	TSC_hg19_v1_chr17_+_45331260 AK300424	-32889	+	AY826979 TSC_hg19_v1_chr17_+_45331224 AB587392 U95204	-32923	+	TSC_hg19_v1_chr17_+_45331192 BC127666 BC127667 J02703 NM_000212 M35999 M20311	-32963	+	BC044604 TSC_hg19_v1_chr17_+_45401141	36994	+	TSC_hg19_v1_chr17_+_45401357 NM_001195192 NM_152347 BC036407 BC037876	37185	+	TSC_hg19_v1_chr17_-_45569837 BC090855 BC067758	205697	-	AY826979|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##U95204|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127666|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127667|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##J02703|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##NM_000212|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M35999|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M20311|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC044604|C17orf57|124989|chromosome 17 open reading frame 57##NM_001195192|C17orf57|124989|chromosome 17 open reading frame 57##NM_152347|C17orf57|124989|chromosome 17 open reading frame 57##BC036407|C17orf57|124989|chromosome 17 open reading frame 57##BC037876|C17orf57|124989|chromosome 17 open reading frame 57##BC090855|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2##BC067758|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2	0.0	
chr21	43820729	43820909	reg1039950.p1	3.888	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-4658	-	M12075 BC032811 NM_003225 X00474 X52003	-34197	-	X51698 BC032820 NM_005423	-49681	-	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	3193	+	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	95561	-	AJ269529 NM_018964	98922	+	AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2##NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.0	
chr3	47008487	47008597	reg1035492.p1	3.888	+	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	-84800	+	BC112221 BC112247 NM_000316 U17418 X68596	-89293	+	AF174483 CU679491 X07373 M24122 AK312044 BC009790 NM_000258	-103617	-	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	9703	-	TSC_hg19_v1_chr3_+_47021155 NM_015175 AK131104 AB384492	12705	+	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	20928	+	BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor##BC112221|PTH1R|5745|parathyroid hormone 1 receptor##BC112247|PTH1R|5745|parathyroid hormone 1 receptor##NM_000316|PTH1R|5745|parathyroid hormone 1 receptor##U17418|PTH1R|5745|parathyroid hormone 1 receptor##X68596|PTH1R|5745|parathyroid hormone 1 receptor##AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12##NM_015175|NBEAL2|23218|neurobeachin-like 2##AK131104|NBEAL2|23218|neurobeachin-like 2##AK092871|NBEAL2|23218|neurobeachin-like 2	0.05433	
chr5	153764081	153764201	reg1022773.p1	3.888	+	TSC_hg19_v1_chr5_+_153570292 BC050333 NM_198321 AK127135 AB078145 AB527381 AJ505950 AK074132	-193783	+	TSC_hg19_v1_chr5_+_153418558 AK315573 BC026244	-345581	+	AK296468 NM_001135037 NM_001242336 NM_005927 TSC_hg19_v1_chr5_+_153418526	-345617	+	TSC_hg19_v1_chr5_-_153825380 BC042059 AK095428	61226	-	TSC_hg19_v1_chr5_+_153825535 AK021588 NM_001131062 NM_001131063 NM_024632	61378	+	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	61469	+	BC050333|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##NM_198321|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK127135|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AB078145|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AJ505950|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK074132|GALNT10|55568|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10 (GalNAc-T10)##AK315573|MFAP3|4238|microfibrillar-associated protein 3##BC026244|MFAP3|4238|microfibrillar-associated protein 3##AK296468|MFAP3|4238|microfibrillar-associated protein 3##NM_001135037|MFAP3|4238|microfibrillar-associated protein 3##NM_001242336|MFAP3|4238|microfibrillar-associated protein 3##NM_005927|MFAP3|4238|microfibrillar-associated protein 3##BC042059|FLJ38109|386627|uncharacterized LOC386627##AK095428|FLJ38109|386627|uncharacterized LOC386627##AK021588|SAP30L|79685|SAP30-like##NM_001131062|SAP30L|79685|SAP30-like##NM_001131063|SAP30L|79685|SAP30-like##NM_024632|SAP30L|79685|SAP30-like##AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like	0.0	
chr5	754205	754340	reg1032753.p1	3.888	+	TSC_hg19_v1_chr5_-_693430 AB017016 BC040496 AK098392 NM_007030	-60811	-	TSC_hg19_v1_chr5_+_612458 AK001427 BC000132 AB040952 AB384228 AK299072 CU674056 BC001750	-141806	+	NM_018140 TSC_hg19_v1_chr5_+_612451	-141844	+	AK023215 NM_024786	96828	-	TSC_hg19_v1_chr5_-_892666 BX648703 AK297573 AK301987 NM_001009877	138377	-	TSC_hg19_v1_chr5_-_892898 AY211916	138618	-	AB017016|TPPP|11076|tubulin polymerization promoting protein##BC040496|TPPP|11076|tubulin polymerization promoting protein##AK098392|TPPP|11076|tubulin polymerization promoting protein##NM_007030|TPPP|11076|tubulin polymerization promoting protein##AK001427|CEP72|55722|centrosomal protein 72kDa##BC000132|CEP72|55722|centrosomal protein 72kDa##AB040952|CEP72|55722|centrosomal protein 72kDa##AK299072|CEP72|55722|centrosomal protein 72kDa##BC001750|CEP72|55722|centrosomal protein 72kDa##NM_018140|CEP72|55722|centrosomal protein 72kDa##AK023215|ZDHHC11|79844|zinc finger, DHHC-type containing 11##NM_024786|ZDHHC11|79844|zinc finger, DHHC-type containing 11##BX648703|BRD9|65980|bromodomain containing 9##AK297573|BRD9|65980|bromodomain containing 9##AK301987|BRD9|65980|bromodomain containing 9##NM_001009877|BRD9|65980|bromodomain containing 9##AY211916|BRD9|65980|bromodomain containing 9	0.0	
chr6	108956826	108956991	reg1035883.p2	3.888	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	-74651	+	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	-74833	+	TSC_hg19_v1_chr6_+_108881027 NM_201559 BC020227 BC021224	-75885	+	TSC_hg19_v1_chr6_+_109169624 AK294574 NM_032131 AK292499 BC030603	212713	+	AF033121 NM_001199934	373282	-	TSC_hg19_v1_chr6_-_109330747 AF033120	373808	-	AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3##BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##NM_201559|FOXO3|2309|forkhead box O3##BC020227|FOXO3|2309|forkhead box O3##BC021224|FOXO3|2309|forkhead box O3##AK294574|ARMC2|84071|armadillo repeat containing 2##NM_032131|ARMC2|84071|armadillo repeat containing 2##AK292499|ARMC2|84071|armadillo repeat containing 2##BC030603|ARMC2|84071|armadillo repeat containing 2##AF033121|SESN1|27244|sestrin 1##NM_001199934|SESN1|27244|sestrin 1##AF033120|SESN1|27244|sestrin 1	0.0	
chr6_cox_hap2	4210476	4210623	reg1038507.p1	3.888	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.931804	CTCF.p2:11:0.932
chr7	94675044	94675149	reg1027535.p1	3.888	+	NM_001166161 NM_001166162 NM_001166163	-135887	+	TSC_hg19_v1_chr7_+_94536986 NM_001166160 NM_017650 AK096514 BC150636	-138130	+	TSC_hg19_v1_chr7_+_94297448 AF038197	-377644	+	M63013 AB528644 M63012 S64615 TSC_hg19_v1_chr7_-_94953802 AK314027 BC074719	278678	-	TSC_hg19_v1_chr7_-_94953845 D84371 U53784 Z70723 NM_000446	278759	-	L48516 AF320003 AF329433 CU687094 TSC_hg19_v1_chr7_-_95025687 AK301772 BC070374 AK304282 NM_000940	350560	-	NM_001166161|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166162|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166163|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166160|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_017650|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##AK096514|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##BC150636|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##AF038197|PEG10|23089|paternally expressed 10##M63013|PON1|5444|paraoxonase 1##M63012|PON1|5444|paraoxonase 1##S64615|PON1|5444|paraoxonase 1##AK314027|PON1|5444|paraoxonase 1##BC074719|PON1|5444|paraoxonase 1##D84371|PON1|5444|paraoxonase 1##U53784|PON1|5444|paraoxonase 1##Z70723|PON1|5444|paraoxonase 1##NM_000446|PON1|5444|paraoxonase 1##L48516|PON3|5446|paraoxonase 3##AF320003|PON3|5446|paraoxonase 3##AF329433|PON3|5446|paraoxonase 3##BC070374|PON3|5446|paraoxonase 3##AK304282|PON3|5446|paraoxonase 3##NM_000940|PON3|5446|paraoxonase 3	0.029882	
chr8	59054042	59054174	reg1040216.p2	3.888	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-146951	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1147682	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1147706	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	269777	+	X56088 M93133 BC101777 BC112184 NM_000780	358599	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	411644	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.0	
chr12	31903406	31903586	reg1033950.p1	3.887	+	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	-21440	-	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	-21522	-	NM_001135863 TSC_hg19_v1_chr12_+_31812621 AL832339 BC039107	-90882	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	41708	-	TSC_hg19_v1_chr12_+_32112348 NM_018169	208835	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	208898	+	BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001135863|METTL20|254013|methyltransferase like 20##AL832339|METTL20|254013|methyltransferase like 20##BC039107|METTL20|254013|methyltransferase like 20##BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35	0.0	
chr12	68552196	68552358	reg1020120.p1	3.887	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	-509654	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-888847	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-889105	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	1145	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	67275	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	95027	-	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22	0.0	
chr14	51203698	51203879	reg1027737.p1	3.887	+	TSC_hg19_v1_chr14_-_51135048 AK225896 AK095903	-68720	-	BC020537 TSC_hg19_v1_chr14_-_51135025 BC006385 NM_021818 AK021500	-68762	-	AJ292969 AK023071 TSC_hg19_v1_chr14_-_51135016 AK290883	-68848	-	AB046785 TSC_hg19_v1_chr14_-_51297860 BC065521 AF223937 AF223938 AF223939 AF302773 AY736182 NM_016350 NM_020921 NM_182944 NM_182946	94032	-	AY311396 AY311397 AY311398 AY311399 BC107141 NM_001206673 NM_181814 BC107142 AK128464	135090	+	AF046785 AF066858 TSC_hg19_v1_chr14_-_51411202 AK313206 Y15233 AK309333 BC065011 BC110791 BC009895 BC082229 AK225904 AK300580 BC095850 M14636 NM_001163940 NM_002863	207394	-	AK225896|SAV1|60485|salvador homolog 1 (Drosophila)##AK095903|SAV1|60485|salvador homolog 1 (Drosophila)##BC020537|SAV1|60485|salvador homolog 1 (Drosophila)##BC006385|SAV1|60485|salvador homolog 1 (Drosophila)##NM_021818|SAV1|60485|salvador homolog 1 (Drosophila)##AK021500|SAV1|60485|salvador homolog 1 (Drosophila)##AJ292969|SAV1|60485|salvador homolog 1 (Drosophila)##AK023071|SAV1|60485|salvador homolog 1 (Drosophila)##AK290883|SAV1|60485|salvador homolog 1 (Drosophila)##AB046785|NIN|51199|ninein (GSK3B interacting protein)##BC065521|NIN|51199|ninein (GSK3B interacting protein)##AF223937|NIN|51199|ninein (GSK3B interacting protein)##AF223938|NIN|51199|ninein (GSK3B interacting protein)##AF223939|NIN|51199|ninein (GSK3B interacting protein)##AF302773|NIN|51199|ninein (GSK3B interacting protein)##AY736182|NIN|51199|ninein (GSK3B interacting protein)##NM_016350|NIN|51199|ninein (GSK3B interacting protein)##NM_020921|NIN|51199|ninein (GSK3B interacting protein)##NM_182944|NIN|51199|ninein (GSK3B interacting protein)##NM_182946|NIN|51199|ninein (GSK3B interacting protein)##AY311396|ABHD12B|145447|abhydrolase domain containing 12B##AY311397|ABHD12B|145447|abhydrolase domain containing 12B##AY311398|ABHD12B|145447|abhydrolase domain containing 12B##AY311399|ABHD12B|145447|abhydrolase domain containing 12B##BC107141|ABHD12B|145447|abhydrolase domain containing 12B##NM_001206673|ABHD12B|145447|abhydrolase domain containing 12B##NM_181814|ABHD12B|145447|abhydrolase domain containing 12B##BC107142|ABHD12B|145447|abhydrolase domain containing 12B##AK128464|ABHD12B|145447|abhydrolase domain containing 12B##AF046785|PYGL|5836|phosphorylase, glycogen, liver##AF066858|PYGL|5836|phosphorylase, glycogen, liver##AK313206|PYGL|5836|phosphorylase, glycogen, liver##Y15233|PYGL|5836|phosphorylase, glycogen, liver##AK309333|PYGL|5836|phosphorylase, glycogen, liver##BC065011|PYGL|5836|phosphorylase, glycogen, liver##BC110791|PYGL|5836|phosphorylase, glycogen, liver##BC009895|PYGL|5836|phosphorylase, glycogen, liver##BC082229|PYGL|5836|phosphorylase, glycogen, liver##AK225904|PYGL|5836|phosphorylase, glycogen, liver##AK300580|PYGL|5836|phosphorylase, glycogen, liver##BC095850|PYGL|5836|phosphorylase, glycogen, liver##M14636|PYGL|5836|phosphorylase, glycogen, liver##NM_001163940|PYGL|5836|phosphorylase, glycogen, liver##NM_002863|PYGL|5836|phosphorylase, glycogen, liver	0.0	
chr14	95830382	95830448	reg1033814.p2	3.887	+	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	-44232	-	TSC_hg19_v1_chr14_+_95624023 BC040596	-206394	+	TSC_hg19_v1_chr14_-_95623867 BC046934 AB023145 BC150287 NM_177438	-206623	-	AK131436 BC146604 BX248076 NM_152592	111689	-	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	170600	-	TSC_hg19_v1_chr14_+_96001352 NM_016417	170911	+	AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC046934|DICER1|23405|dicer 1, ribonuclease type III##AB023145|DICER1|23405|dicer 1, ribonuclease type III##BC150287|DICER1|23405|dicer 1, ribonuclease type III##NM_177438|DICER1|23405|dicer 1, ribonuclease type III##AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##NM_016417|GLRX5|51218|glutaredoxin 5	0.0	
chr15	80877918	80877984	reg1044734.p2	3.887	+	AK295763 TSC_hg19_v1_chr15_+_80733623	-144346	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	-181217	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-432575	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	109711	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	110058	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	193770	+	AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199	0.0	
chr16	70132946	70133054	reg1038907.p1	3.887	+	TSC_hg19_v1_chr16_-_70099842 AK027135 AL833251	-33180	-	AK292860 TSC_hg19_v1_chr16_-_70099722	-33275	-	AF521893 NM_182619 BC141808 AF428259 AF448856 AL833339 AK289884 AK298310 AK074773 EU831776 EU831854 CU687316 AK096051	-147908	+	AB082521 BC150251 NM_017990	14528	+	TSC_hg19_v1_chr16_+_70148247 AK292502 AK302987	15247	+	AF448856 BC039068 NM_173619 AL833339 AK074773 CU687316 BC062573	75104	+	AL833251|PDXDC2P|283970|pyridoxal-dependent decarboxylase domain containing 2, pseudogene##AK292860|PDXDC2P|283970|pyridoxal-dependent decarboxylase domain containing 2, pseudogene##AF521893|CLEC18A|348174|C-type lectin domain family 18, member A##NM_182619|CLEC18A|348174|C-type lectin domain family 18, member A##BC141808|CLEC18A|348174|C-type lectin domain family 18, member A##AF428259|CLEC18A|348174|C-type lectin domain family 18, member A##AF448856|CLEC18C|283971|C-type lectin domain family 18, member C##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AK289884|CLEC18A|348174|C-type lectin domain family 18, member A##AK298310|CLEC18A|348174|C-type lectin domain family 18, member A##AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##EU831776|CLEC18A|348174|C-type lectin domain family 18, member A##EU831854|CLEC18A|348174|C-type lectin domain family 18, member A##AK096051|CLEC18A|348174|C-type lectin domain family 18, member A##AB082521|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##BC150251|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##NM_017990|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##AK292502|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##AK302987|PDPR|55066|pyruvate dehydrogenase phosphatase regulatory subunit##AF448856|CLEC18C|283971|C-type lectin domain family 18, member C##BC039068|CLEC18C|283971|C-type lectin domain family 18, member C##NM_173619|CLEC18C|283971|C-type lectin domain family 18, member C##AL833339|CLEC18C|283971|C-type lectin domain family 18, member C##AK074773|CLEC18A|348174|C-type lectin domain family 18, member A##BC062573|CLEC18C|283971|C-type lectin domain family 18, member C	0.455135	CTCF.p2:-10:0.455
chr17	75430009	75430110	reg1035906.p1	3.887	+	AB023208 NM_001113494 AJ312322	-57890	+	TSC_hg19_v1_chr17_+_75369418 AK304143	-60634	+	TSC_hg19_v1_chr17_+_75369236 AJ312319 NM_001113493	-60806	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	16586	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	16723	+	AK299828 TSC_hg19_v1_chr17_+_75447450	17330	+	AB023208|SEPT9|10801|septin 9##NM_001113494|SEPT9|10801|septin 9##AJ312322|SEPT9|10801|septin 9##AK304143|SEPT9|10801|septin 9##AJ312319|SEPT9|10801|septin 9##NM_001113493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9	0.035945	
chr18	56355295	56355467	reg1035670.p1	3.887	+	TSC_hg19_v1_chr18_+_56338830 AB528440 DQ892319 DQ895521	-16536	+	TSC_hg19_v1_chr18_+_56338790 AB026118	-16584	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	-16653	+	NM_018181 AF295077 BC130618 BC130620	174738	+	TSC_hg19_v1_chr18_+_56530714 AB046849	175474	+	TSC_hg19_v1_chr18_+_56531281 BC036366	175968	+	DQ892319|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##DQ895521|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AB026118|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_018181|ZNF532|55205|zinc finger protein 532##AF295077|ZNF532|55205|zinc finger protein 532##BC130618|ZNF532|55205|zinc finger protein 532##BC130620|ZNF532|55205|zinc finger protein 532##AB046849|ZNF532|55205|zinc finger protein 532##BC036366|ZNF532|55205|zinc finger protein 532	0.0	
chr19	17887485	17887604	reg1036407.p1	3.887	+	NM_001161359 NM_015122 TSC_hg19_v1_chr19_+_17862326 AK316458 BC041130	-25228	+	TSC_hg19_v1_chr19_+_17858564 NM_001161357 NM_001161358 AK291410 BC028021	-28993	+	DQ387861 NM_018174 AL834233 BC067115 TSC_hg19_v1_chr19_+_17830310 BC080547 AJ440784 AK027623 BC113952 AK308975	-57235	+	TSC_hg19_v1_chr19_+_17905918 NM_014256	18372	+	TSC_hg19_v1_chr19_+_17905971 AK075466 AK314323 AK075434 AB015630 AK225421 AB049585 AY358955 BC066876 BC067423 AK225478	18415	+	BC032810 BC040435 BC053345 BC061886 BC106721 BC071706 BC106722 NM_005543 S72482 AK302780 AY082014	44803	-	NM_001161359|FCHO1|23149|FCH domain only 1##NM_015122|FCHO1|23149|FCH domain only 1##AK316458|FCHO1|23149|FCH domain only 1##BC041130|FCHO1|23149|FCH domain only 1##NM_001161357|FCHO1|23149|FCH domain only 1##NM_001161358|FCHO1|23149|FCH domain only 1##AK291410|FCHO1|23149|FCH domain only 1##BC028021|FCHO1|23149|FCH domain only 1##DQ387861|MAP1S|55201|microtubule-associated protein 1S##NM_018174|MAP1S|55201|microtubule-associated protein 1S##AL834233|MAP1S|55201|microtubule-associated protein 1S##BC067115|MAP1S|55201|microtubule-associated protein 1S##BC080547|MAP1S|55201|microtubule-associated protein 1S##AJ440784|MAP1S|55201|microtubule-associated protein 1S##AK027623|MAP1S|55201|microtubule-associated protein 1S##BC113952|MAP1S|55201|microtubule-associated protein 1S##AK308975|MAP1S|55201|microtubule-associated protein 1S##NM_014256|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK075466|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK314323|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK075434|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AB015630|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK225421|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AB049585|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AY358955|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC066876|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC067423|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK225478|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC032810|INSL3|3640|insulin-like 3 (Leydig cell)##BC040435|INSL3|3640|insulin-like 3 (Leydig cell)##BC053345|INSL3|3640|insulin-like 3 (Leydig cell)##BC061886|INSL3|3640|insulin-like 3 (Leydig cell)##BC106721|INSL3|3640|insulin-like 3 (Leydig cell)##BC071706|INSL3|3640|insulin-like 3 (Leydig cell)##BC106722|INSL3|3640|insulin-like 3 (Leydig cell)##NM_005543|INSL3|3640|insulin-like 3 (Leydig cell)##S72482|INSL3|3640|insulin-like 3 (Leydig cell)##AK302780|INSL3|3640|insulin-like 3 (Leydig cell)##AY082014|INSL3|3640|insulin-like 3 (Leydig cell)	0.0	
chr20	55973503	55973585	reg1033158.p1	3.887	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-7087	+	NM_001190472	-38667	-	AK292247 AY349350 NM_001015885	-46943	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	126657	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	162613	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	221994	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.0	
chr21	45574928	45575005	reg1028303.p1	3.887	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-21405	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-21461	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-47667	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	85800	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	85891	-	AF194032 NM_013369 NM_175867	107132	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr2	197041072	197041250	reg1029966.p2	3.887	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-4843	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-4882	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-107666	-	BC117194 BC117198 AB037722 NM_020760	416131	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	463196	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	623252	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.0	
chr6	157089368	157089539	reg1030409.p2	3.887	+	AF190122 NM_015718	-1312417	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1453830	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1453868	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	9610	+	TSC_hg19_v1_chr6_+_157099206 AB587572	9772	+	TSC_hg19_v1_chr6_+_157099283 AF521671	9831	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.0	
chr6	28109710	28109834	reg1027099.p2	3.887	+	TSC_hg19_v1_chr6_+_28109660 AB208793 BC096282 BC096283 BC096284 BC130032 NM_006298 U57796	-81	+	TSC_hg19_v1_chr6_-_28104623 AK309286 BC043177	-5174	-	AK025844 AK294017 AK309837 NM_025231 TSC_hg19_v1_chr6_+_28092406 BC004255	-17373	+	AK292767 BC050562 BC015543 BC039027 TSC_hg19_v1_chr6_-_28186889	77004	-	NM_001199479 NM_001199480 NM_006299 AK304013 BC010374 TSC_hg19_v1_chr6_+_28193073 AK226035 AY261373 U62392	83300	+	BC014031 NM_019110 AK056698 AK315783 AY781778	110250	-	AB208793|ZNF192|7745|zinc finger protein 192##BC096282|ZNF192|7745|zinc finger protein 192##BC096283|ZNF192|7745|zinc finger protein 192##BC096284|ZNF192|7745|zinc finger protein 192##BC130032|ZNF192|7745|zinc finger protein 192##NM_006298|ZNF192|7745|zinc finger protein 192##U57796|ZNF192|7745|zinc finger protein 192##AK309286|LOC100129195|100129195|uncharacterized LOC100129195##BC043177|LOC100129195|100129195|uncharacterized LOC100129195##AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16##NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16##BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK292767|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC050562|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC015543|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC039027|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##NM_001199479|ZNF193|7746|zinc finger protein 193##NM_001199480|ZNF193|7746|zinc finger protein 193##NM_006299|ZNF193|7746|zinc finger protein 193##AK304013|ZNF193|7746|zinc finger protein 193##BC010374|ZNF193|7746|zinc finger protein 193##AK226035|ZNF193|7746|zinc finger protein 193##AY261373|ZNF193|7746|zinc finger protein 193##U62392|ZNF193|7746|zinc finger protein 193##BC014031|ZKSCAN4|387032|zinc finger with KRAB and SCAN domains 4##NM_019110|ZKSCAN4|387032|zinc finger with KRAB and SCAN domains 4##AK056698|ZKSCAN4|387032|zinc finger with KRAB and SCAN domains 4##AK315783|ZKSCAN4|387032|zinc finger with KRAB and SCAN domains 4##AY781778|ZKSCAN4|387032|zinc finger with KRAB and SCAN domains 4	0.0	
chr6	71017908	71018063	reg1035610.p2	3.887	+	X54412 BC015409 TSC_hg19_v1_chr6_-_71012827 NM_001851	-5185	-	X54413 BC008620 BC063646 NM_078485	-25153	-	AK309023 TSC_hg19_v1_chr6_+_70577418	-440623	+	TSC_hg19_v1_chr6_+_71123122 NM_001105531 NM_020819	105128	+	TSC_hg19_v1_chr6_+_71123224 CR749254 BC131782	105229	+	NM_001162529 AB037832	118172	+	X54412|COL9A1|1297|collagen, type IX, alpha 1##BC015409|COL9A1|1297|collagen, type IX, alpha 1##NM_001851|COL9A1|1297|collagen, type IX, alpha 1##X54413|COL9A1|1297|collagen, type IX, alpha 1##BC008620|COL9A1|1297|collagen, type IX, alpha 1##BC063646|COL9A1|1297|collagen, type IX, alpha 1##NM_078485|COL9A1|1297|collagen, type IX, alpha 1##NM_001105531|FAM135A|57579|family with sequence similarity 135, member A##NM_020819|FAM135A|57579|family with sequence similarity 135, member A##CR749254|FAM135A|57579|family with sequence similarity 135, member A##BC131782|FAM135A|57579|family with sequence similarity 135, member A##NM_001162529|FAM135A|57579|family with sequence similarity 135, member A##AB037832|FAM135A|57579|family with sequence similarity 135, member A	0.824097	CTCF.p2:-19:0.824
chr8	41909792	41909906	reg1031520.p1	3.887	+	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	-350	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-155539	-	AK026601 TSC_hg19_v1_chr8_+_41685847	-224024	+	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	100684	+	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	155239	-	AK289387 AK290575 NM_000930 NM_033011 TSC_hg19_v1_chr8_-_42065195	155345	-	U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue##AK289387|PLAT|5327|plasminogen activator, tissue##AK290575|PLAT|5327|plasminogen activator, tissue##NM_000930|PLAT|5327|plasminogen activator, tissue##NM_033011|PLAT|5327|plasminogen activator, tissue	0.0	
chr1	12111985	12112137	reg1022340.p1	3.886	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-32491	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-32527	+	FJ618905 NM_021933	-32763	+	M83554 NM_001243 BC136400 BC171762 S75768	11483	+	D86042 BC063482 NM_152942 BC073839 BC141804	73955	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	115000	+	AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr13	52703186	52703275	reg1036472.p1	3.886	+	BC063885 NM_199289	-17	-	BC073862 D87455 NM_021645	-104478	+	TSC_hg19_v1_chr13_+_52586546 NM_001004127 BC142998 AK296747 AK092428 AX747540 BC108677 BC111022 AK025456 BC143059 BC150316	-116695	+	NM_152720 TSC_hg19_v1_chr13_-_52733672 BC019916 AK290259	30496	-	NM_001146099 NM_002498	30765	-	TSC_hg19_v1_chr13_-_52768573 AK307345 AK307124 AK309380 BX648914 AK027536	65329	-	BC063885|NEK5|341676|NIMA (never in mitosis gene a)-related kinase 5##NM_199289|NEK5|341676|NIMA (never in mitosis gene a)-related kinase 5##BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)##NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)##NM_001004127|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC142998|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK296747|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC108677|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC111022|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##AK025456|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC143059|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##BC150316|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##AK307345|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK307124|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK309380|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##BX648914|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK027536|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1	0.0	
chr14	35803302	35803399	reg1034686.p2	3.886	+	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	-41707	+	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	-41779	+	TSC_hg19_v1_chr14_+_35591757 AK301931 BC050339 BC044580 BC001542 AK304066 BC032221 NM_014672 AB002389 BX161394 BX161487 AK303508	-211498	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	70574	-	AF260323 NM_032594 BC130377 BC130379 TSC_hg19_v1_chr14_+_36003369 AB037912 AK096639	199959	+	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	474797	-	BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK301931|KIAA0391|9692|KIAA0391##BC044580|KIAA0391|9692|KIAA0391##BC001542|KIAA0391|9692|KIAA0391##AK304066|KIAA0391|9692|KIAA0391##BC032221|KIAA0391|9692|KIAA0391##NM_014672|KIAA0391|9692|KIAA0391##AB002389|KIAA0391|9692|KIAA0391##BX161394|KIAA0391|9692|KIAA0391##BX161487|KIAA0391|9692|KIAA0391##AK303508|KIAA0391|9692|KIAA0391##BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AF260323|INSM2|84684|insulinoma-associated 2##NM_032594|INSM2|84684|insulinoma-associated 2##BC130377|INSM2|84684|insulinoma-associated 2##BC130379|INSM2|84684|insulinoma-associated 2##AB037912|INSM2|84684|insulinoma-associated 2##AK096639|INSM2|84684|insulinoma-associated 2##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)	0.0	
chr16	47494866	47495046	reg1031238.p1	3.886	+	TSC_hg19_v1_chr16_-_47494975 BC006321 DQ893514 DQ896493 AF503339 AK027596	-91	-	TSC_hg19_v1_chr16_-_47177902 AK074937 NM_001201477 NM_018092	-317034	-	AY358718 BC108727 TSC_hg19_v1_chr16_-_47177852 BC098380	-317110	-	TSC_hg19_v1_chr16_-_47494995 BC024162 NM_030790	79	-	TSC_hg19_v1_chr16_-_47495158 AF212247 AK301908	201	-	TSC_hg19_v1_chr16_+_47495206 NM_000293 NM_001031835 AK298588	232	+	BC006321|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ893514|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ896493|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF503339|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK027596|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK074937|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_001201477|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_018092|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##AY358718|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC108727|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC098380|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC024162|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##NM_030790|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF212247|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK301908|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##NM_000293|PHKB|5257|phosphorylase kinase, beta##NM_001031835|PHKB|5257|phosphorylase kinase, beta	0.0	
chr17	15059494	15059599	reg1041946.p1	3.886	+	TSC_hg19_v1_chr17_+_14204397 AK023723 BC063301 AF105377 NM_006041 BC069664 BC069725	-855101	+	NM_001007530 BC146859 BC071823	-919383	-	TSC_hg19_v1_chr17_+_13972841 BC000060 BC006394 U09466 AK294213 AK295925 BT006985 CU674016 DQ893604 DQ895073	-1086665	+	CR541931 CR541953 M94048 NM_153322 S61788 TSC_hg19_v1_chr17_-_15164113	104534	-	AK300690 L03203 TSC_hg19_v1_chr17_-_15165834	106273	-	AK290640 TSC_hg19_v1_chr17_-_15165870 BC019040	106319	-	AK023723|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC063301|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##AF105377|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##NM_006041|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC069664|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC069725|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##NM_001007530|CDRT15|146822|CMT1A duplicated region transcript 15##BC146859|CDRT15|146822|CMT1A duplicated region transcript 15##BC071823|CDRT15|146822|CMT1A duplicated region transcript 15##BC000060|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##BC006394|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##U09466|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK294213|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK295925|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##BT006985|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##DQ893604|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##DQ895073|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##CR541931|PMP22|5376|peripheral myelin protein 22##CR541953|PMP22|5376|peripheral myelin protein 22##M94048|PMP22|5376|peripheral myelin protein 22##NM_153322|PMP22|5376|peripheral myelin protein 22##S61788|PMP22|5376|peripheral myelin protein 22##AK300690|PMP22|5376|peripheral myelin protein 22##L03203|PMP22|5376|peripheral myelin protein 22##AK290640|PMP22|5376|peripheral myelin protein 22##BC019040|PMP22|5376|peripheral myelin protein 22	0.080154	
chr17	5185279	5185360	reg1035805.p2	3.886	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	-47218	-	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-89939	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-90146	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	347	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	137606	-	AY775314 AY775315 AY775316 AY775317 AY775318 AY775319 AY775320 AY775321 AY775323 NM_001033002 NM_001160243 NM_001160244 NM_001160246 NM_001160266 NM_001160267	137641	+	DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa##AY775314|RPAIN|84268|RPA interacting protein##AY775315|RPAIN|84268|RPA interacting protein##AY775316|RPAIN|84268|RPA interacting protein##AY775317|RPAIN|84268|RPA interacting protein##AY775318|RPAIN|84268|RPA interacting protein##AY775319|RPAIN|84268|RPA interacting protein##AY775320|RPAIN|84268|RPA interacting protein##AY775321|RPAIN|84268|RPA interacting protein##AY775323|RPAIN|84268|RPA interacting protein##NM_001033002|RPAIN|84268|RPA interacting protein##NM_001160243|RPAIN|84268|RPA interacting protein##NM_001160244|RPAIN|84268|RPA interacting protein##NM_001160246|RPAIN|84268|RPA interacting protein##NM_001160266|RPAIN|84268|RPA interacting protein##NM_001160267|RPAIN|84268|RPA interacting protein	0.0	
chr17	60342472	60342647	reg1035586.p1	3.886	+	TSC_hg19_v1_chr17_-_60142600 BC140891 AF117754 NM_005121	-199932	-	TSC_hg19_v1_chr17_-_60005339 AB033113 AK308307 AK299032 AL136800 NM_020748	-337217	-	BC101472 BC101474 AF360549 TSC_hg19_v1_chr17_-_59940873 NM_032043	-401765	-	NM_001144933	105019	+	AK098684 NM_173503 BC101752 BC101778	115367	+	TSC_hg19_v1_chr17_+_60501257 NM_181725 BC006985 AB590991 AF161384 AK022822 AF161385	158704	+	BC140891|MED13|9969|mediator complex subunit 13##AF117754|MED13|9969|mediator complex subunit 13##NM_005121|MED13|9969|mediator complex subunit 13##AB033113|INTS2|57508|integrator complex subunit 2##AK308307|INTS2|57508|integrator complex subunit 2##AK299032|INTS2|57508|integrator complex subunit 2##AL136800|INTS2|57508|integrator complex subunit 2##NM_020748|INTS2|57508|integrator complex subunit 2##BC101472|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##BC101474|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AF360549|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_032043|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_001144933|EFCAB3|146779|EF-hand calcium binding domain 3##AK098684|EFCAB3|146779|EF-hand calcium binding domain 3##NM_173503|EFCAB3|146779|EF-hand calcium binding domain 3##BC101752|EFCAB3|146779|EF-hand calcium binding domain 3##BC101778|EFCAB3|146779|EF-hand calcium binding domain 3##NM_181725|METTL2A|339175|methyltransferase like 2A##BC006985|METTL2A|339175|methyltransferase like 2A##AF161384|METTL2A|339175|methyltransferase like 2A##AK022822|METTL2A|339175|methyltransferase like 2A##AF161385|METTL2A|339175|methyltransferase like 2A	0.612609	CTCF.p2:38:0.589
chr18	11763	11914	reg1031864.p1	3.886	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr18_+_158556 NM_001037334 NM_005151 AK297605 AK315438 BC003556 AK095516	146692	+	TSC_hg19_v1_chr18_+_158587 U30888 AB528508 DQ890594 DQ893762 CU678498 BT007183	146804	+	TSC_hg19_v1_chr18_-_268046 AY573302 AY573303 CU679685 DQ892768 EU176747 AK225709 L36529 AK314755 AK225067 BC010381 NM_005131	256195	-	NM_001037334|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##NM_005151|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AK297605|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AK315438|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##BC003556|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AK095516|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##U30888|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##DQ890594|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##DQ893762|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##BT007183|USP14|9097|ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)##AY573302|THOC1|9984|THO complex 1##AY573303|THOC1|9984|THO complex 1##DQ892768|THOC1|9984|THO complex 1##EU176747|THOC1|9984|THO complex 1##AK225709|THOC1|9984|THO complex 1##L36529|THOC1|9984|THO complex 1##AK314755|THOC1|9984|THO complex 1##AK225067|THOC1|9984|THO complex 1##BC010381|THOC1|9984|THO complex 1##NM_005131|THOC1|9984|THO complex 1	0.054595	
chr3	33360641	33360762	reg1033329.p2	3.886	+	TSC_hg19_v1_chr3_+_33318965 AK001271 NM_012157 AK302218 NM_001171713 AK303764 AK299665 AK294209 AF174589 AK316229 AK001438 AK298967 AK297534 AF186273 BC031556	-41751	+	AB011099 NM_015551	-99995	-	TSC_hg19_v1_chr3_+_33155562 AJ006470 CU679079 DQ893221 DQ896550	-205128	+	AK023274 AF198487 TSC_hg19_v1_chr3_-_33481564	120835	-	TSC_hg19_v1_chr3_-_33481868 BC047235 NM_001128160 NM_014517	121164	-	TSC_hg19_v1_chr3_-_33481898 AK293100 NM_001128161	121199	-	AK001271|FBXL2|25827|F-box and leucine-rich repeat protein 2##NM_012157|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK302218|FBXL2|25827|F-box and leucine-rich repeat protein 2##NM_001171713|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK303764|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK299665|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK294209|FBXL2|25827|F-box and leucine-rich repeat protein 2##AF174589|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK316229|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK001438|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK298967|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK297534|FBXL2|25827|F-box and leucine-rich repeat protein 2##AF186273|FBXL2|25827|F-box and leucine-rich repeat protein 2##BC031556|FBXL2|25827|F-box and leucine-rich repeat protein 2##AB011099|SUSD5|26032|sushi domain containing 5##NM_015551|SUSD5|26032|sushi domain containing 5##AJ006470|CRTAP|10491|cartilage associated protein##DQ893221|CRTAP|10491|cartilage associated protein##DQ896550|CRTAP|10491|cartilage associated protein##AK023274|UBP1|7342|upstream binding protein 1 (LBP-1a)##AF198487|UBP1|7342|upstream binding protein 1 (LBP-1a)##BC047235|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_001128160|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_014517|UBP1|7342|upstream binding protein 1 (LBP-1a)##AK293100|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_001128161|UBP1|7342|upstream binding protein 1 (LBP-1a)	0.723379	CTCF.p2:0:0.723
chr8	134537189	134537286	reg1034899.p1	3.886	+	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-227740	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-333907	+	NM_001045556 NM_001045557	-421928	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	46860	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1171557	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1187842	-	AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr10	87860379	87860468	reg1022656.p1	3.885	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-1675728	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-1728805	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-1772029	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	265840	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	421071	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	421107	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.013138	
chr12	111284918	111285025	reg1030511.p1	3.885	+	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-168	+	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	-104215	-	TSC_hg19_v1_chr12_-_111180641 X74008 BC014073	-104315	-	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	73407	-	BC151245 NM_015267 AB006631 AF271236	186901	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	521875	-	AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##X74008|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC014073|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A	0.0	
chr1	236695185	236695324	reg1036594.p1	3.885	+	TSC_hg19_v1_chr1_+_236687323 AK296061 BC015818 AB209914	-7925	+	NM_201544 BC016486	-8203	+	AF074000 AF074001 AF074002 NM_006499 NM_201543	-8516	+	BC062442 TSC_hg19_v1_chr1_-_236767817 AK095692 NM_018072	72559	-	AK315250 NM_001103 TSC_hg19_v1_chr1_+_236849798 AK297886 M86406 AB209521 BC051770 BC047901 AB590561 CU690840	154608	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	263323	+	AK296061|LGALS8|3964|lectin, galactoside-binding, soluble, 8##BC015818|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AB209914|LGALS8|3964|lectin, galactoside-binding, soluble, 8##NM_201544|LGALS8|3964|lectin, galactoside-binding, soluble, 8##BC016486|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AF074000|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AF074001|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AF074002|LGALS8|3964|lectin, galactoside-binding, soluble, 8##NM_006499|LGALS8|3964|lectin, galactoside-binding, soluble, 8##NM_201543|LGALS8|3964|lectin, galactoside-binding, soluble, 8##BC062442|HEATR1|55127|HEAT repeat containing 1##AK095692|HEATR1|55127|HEAT repeat containing 1##NM_018072|HEATR1|55127|HEAT repeat containing 1##AK315250|ACTN2|88|actinin, alpha 2##NM_001103|ACTN2|88|actinin, alpha 2##AK297886|ACTN2|88|actinin, alpha 2##M86406|ACTN2|88|actinin, alpha 2##AB209521|ACTN2|88|actinin, alpha 2##BC051770|ACTN2|88|actinin, alpha 2##BC047901|ACTN2|88|actinin, alpha 2##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase	0.0	
chr17	72459496	72459599	reg1033267.p2	3.885	+	TSC_hg19_v1_chr17_+_72439191 AK126429	-20342	+	AJ276102 NM_018653	-29712	+	AK075397 AF207989 AK222909 TSC_hg19_v1_chr17_+_72428254 AK000249	-31292	+	NM_007261 AJ224864 BC032352	2991	+	AF020314 TSC_hg19_v1_chr17_+_72462772	3223	+	TSC_hg19_v1_chr17_+_72462821 AF161346 AJ010101 AJ010102 AJ010103 AJ238323 AK309636 BC020681 AB590938 CU689350	3263	+	AK126429|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AJ276102|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_018653|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK075397|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AF207989|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK222909|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##AK000249|GPRC5C|55890|G protein-coupled receptor, family C, group 5, member C##NM_007261|CD300A|11314|CD300a molecule##AJ224864|CD300A|11314|CD300a molecule##BC032352|CD300A|11314|CD300a molecule##AF020314|CD300A|11314|CD300a molecule##AF161346|CD300A|11314|CD300a molecule##AJ010101|CD300A|11314|CD300a molecule##AJ010102|CD300A|11314|CD300a molecule##AJ010103|CD300A|11314|CD300a molecule##AJ238323|CD300A|11314|CD300a molecule##AK309636|CD300A|11314|CD300a molecule##BC020681|CD300A|11314|CD300a molecule	0.0	
chr19	44100609	44100732	reg1033263.p1	3.885	+	AK026353 NM_024327	-127	+	TSC_hg19_v1_chr19_-_44100287 NM_001007561	-458	-	TSC_hg19_v1_chr19_+_44084761 AK129550	-15891	+	TSC_hg19_v1_chr19_+_44100765 NM_001145347 AK297891 BC002981	90	+	BC034980 NM_001145641 AK093056 AX747890	15586	+	BC015950 TSC_hg19_v1_chr19_-_44123754 AY257197 BC045799	23079	-	AK026353|ZNF576|79177|zinc finger protein 576##NM_024327|ZNF576|79177|zinc finger protein 576##NM_001007561|IRGQ|126298|immunity-related GTPase family, Q##AK129550|LOC390940|390940|uncharacterized protein ENSP00000244321##NM_001145347|ZNF576|79177|zinc finger protein 576##BC002981|ZNF576|79177|zinc finger protein 576##BC034980|SRRM5|100170229|serine/arginine repetitive matrix 5##NM_001145641|SRRM5|100170229|serine/arginine repetitive matrix 5##AK093056|SRRM5|100170229|serine/arginine repetitive matrix 5##BC015950|ZNF428|126299|zinc finger protein 428##AY257197|ZNF428|126299|zinc finger protein 428##BC045799|ZNF428|126299|zinc finger protein 428	0.341081	CTCF.p2:63:0.341
chr2	231815291	231815455	reg1032553.p1	3.885	+	BC032694 NM_005683	-25433	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-85651	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-85695	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	45519	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	86864	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	106204	+	BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.0	
chr3	55215026	55215117	reg1009188.p1	3.885	+	BC074741 AF225421 NM_020678	-253055	-	TSC_hg19_v1_chr3_+_54156691 AF516696 NM_018398	-1058380	+	BC137502 BC137505 TSC_hg19_v1_chr3_+_54156614	-1058472	+	TSC_hg19_v1_chr3_-_55514935 CU687936 AB590996 BC074783	299873	-	TSC_hg19_v1_chr3_-_55515377 L20861	300304	-	AK290869 TSC_hg19_v1_chr3_-_55515412	300337	-	BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF516696|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##NM_018398|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137502|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137505|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A##L20861|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A	0.834933	
chr10	46983552	46983678	reg1009511.p1	3.884	+	TSC_hg19_v1_chr10_-_46970597 AK131036 AK293632 NM_031912 NM_181519	-13015	-	BC139914 AK290186 TSC_hg19_v1_chr10_-_46970538	-13105	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-342594	-	BC011672 NM_014696	9930	+	AY649985 AY649986 NM_005972	99918	+	AB590156 CU687256 DQ893430 DQ896775 M81844 AK296573 AK300139 AK300158 BC021910 BC004376 NM_001098845 AK296976 Z36830 BC073755 NM_001040084 AK298761	190404	-	AK131036|SYT15|83849|synaptotagmin XV##AK293632|SYT15|83849|synaptotagmin XV##NM_031912|SYT15|83849|synaptotagmin XV##NM_181519|SYT15|83849|synaptotagmin XV##BC139914|SYT15|83849|synaptotagmin XV##AK290186|SYT15|83849|synaptotagmin XV##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC011672|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##NM_014696|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##AY649985|PPYR1|5540|pancreatic polypeptide receptor 1##AY649986|PPYR1|5540|pancreatic polypeptide receptor 1##NM_005972|PPYR1|5540|pancreatic polypeptide receptor 1##DQ893430|ANXA8L2|244|annexin A8-like 2##DQ896775|ANXA8|653145|annexin A8##M81844|ANXA8|653145|annexin A8##AK296573|ANXA8|653145|annexin A8##AK300139|ANXA8|653145|annexin A8##AK300158|ANXA8|653145|annexin A8##BC004376|ANXA8|653145|annexin A8##NM_001098845|ANXA8L1|728113|annexin A8-like 1##Z36830|ANXA8|653145|annexin A8##BC073755|ANXA8|653145|annexin A8##NM_001040084|ANXA8|653145|annexin A8##AK298761|ANXA8|653145|annexin A8	0.952793	CTCF.p2:-16:0.953
chr11	116015138	116015319	reg1036138.p1	3.884	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-640048	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-926580	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1465980	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	628470	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	643487	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	643510	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.655218	CTCF.p2:-16:0.655
chr1	28526189	28526344	reg1030625.p1	3.884	+	S52624 AK292053 NM_001164721 NM_001164722	-5854	-	NM_000952 NM_001164723	-22812	-	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-111142	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	33265	-	TSC_hg19_v1_chr1_+_28562634 NM_016311 NM_178190 NM_178191 AK316600 BC009677 AK000934 AB029042 BT009849 CR457097 EU832478 EU832558 BC017562 BC004955	36383	+	TSC_hg19_v1_chr1_+_28586034 NM_031459 BC013304 AY123223 BC033719 AL136551 AK315710 DQ892827 DQ896073 EU831582 EU831667 AB529110 CU680558	59892	+	S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_016311|ATPIF1|93974|ATPase inhibitory factor 1##NM_178190|ATPIF1|93974|ATPase inhibitory factor 1##NM_178191|ATPIF1|93974|ATPase inhibitory factor 1##AK316600|ATPIF1|93974|ATPase inhibitory factor 1##BC009677|ATPIF1|93974|ATPase inhibitory factor 1##AK000934|ATPIF1|93974|ATPase inhibitory factor 1##AB029042|ATPIF1|93974|ATPase inhibitory factor 1##BT009849|ATPIF1|93974|ATPase inhibitory factor 1##CR457097|ATPIF1|93974|ATPase inhibitory factor 1##EU832478|ATPIF1|93974|ATPase inhibitory factor 1##EU832558|ATPIF1|93974|ATPase inhibitory factor 1##BC017562|ATPIF1|93974|ATPase inhibitory factor 1##BC004955|ATPIF1|93974|ATPase inhibitory factor 1##NM_031459|SESN2|83667|sestrin 2##BC013304|SESN2|83667|sestrin 2##AY123223|SESN2|83667|sestrin 2##BC033719|SESN2|83667|sestrin 2##AL136551|SESN2|83667|sestrin 2##AK315710|SESN2|83667|sestrin 2##DQ892827|SESN2|83667|sestrin 2##DQ896073|SESN2|83667|sestrin 2##EU831582|SESN2|83667|sestrin 2##EU831667|SESN2|83667|sestrin 2	0.011228	
chr15	85872921	85873047	reg1031696.p1	3.884	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-206666	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-347658	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-347747	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	50907	+	AF127481 NM_144767	347283	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	465113	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	0.0	
chr16	13998827	13998943	reg1035326.p1	3.884	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-1003417	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-1101166	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-1101234	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	15146	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	166201	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	281633	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.842046	CTCF.p2:-22:0.842
chr17	55530181	55530271	reg1038327.p2	3.884	+	AK093888 AX748353 NM_170721	-195853	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-196253	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-367083	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	397178	-	AK000746 NM_017949	450523	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	502450	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.0	
chr20	38458464	38458644	reg1024829.p2	3.884	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-867565	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-903486	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-903565	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	859323	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	1198940	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	1199110	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.0	
chr2	113563294	113563374	reg1033593.p2	3.884	+	NM_000575 BC035169	-20362	-	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	-41112	-	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	-159814	+	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	31010	-	AF167368 AF200496 NM_014439 NM_173202 NM_173203 NM_173204 BC020637 AB451333 AB451478 AB590279 AF251119 AF251120 AY071840 AY071841 CU676594 DQ891388	107234	+	AF201832 NM_173205	109435	+	NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta##AF167368|IL37|27178|interleukin 37##AF200496|IL37|27178|interleukin 37##NM_014439|IL37|27178|interleukin 37##NM_173202|IL37|27178|interleukin 37##NM_173203|IL37|27178|interleukin 37##NM_173204|IL37|27178|interleukin 37##BC020637|IL37|27178|interleukin 37##AB451333|IL37|27178|interleukin 37##AB451478|IL37|27178|interleukin 37##AF251119|IL37|27178|interleukin 37##AF251120|IL37|27178|interleukin 37##AY071840|IL37|27178|interleukin 37##AY071841|IL37|27178|interleukin 37##DQ891388|IL37|27178|interleukin 37##AF201832|IL37|27178|interleukin 37##NM_173205|IL37|27178|interleukin 37	0.0	
chr2	121834642	121834776	reg1036109.p1	3.884	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	-279816	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-730912	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-824205	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	208064	-	TSC_hg19_v1_chr2_-_122159142 CR749627	324446	-	AK297259 TSC_hg19_v1_chr2_-_122247924	413210	-	NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1##AK297259|CLASP1|23332|cytoplasmic linker associated protein 1	0.999542	CTCF.p2:9:1.000
chr5	132757258	132757353	reg1037227.p1	3.884	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-324414	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-328902	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-351202	+	TSC_hg19_v1_chr5_-_132948202 AK055684	190894	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	190933	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	547070	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.752054	CTCF.p2:-5:0.752
chr5	1468487	1468667	reg1038073.p1	3.884	+	S46955 EF174603 M95167 NM_001044	-23051	-	AB045223 DQ892147 DQ895343 AK027306 BC025305 NM_030782 TSC_hg19_v1_chr5_-_1345095	-123555	-	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	-173486	-	CU676500 BC020166 AK090444 TSC_hg19_v1_chr5_-_1494996	26357	-	TSC_hg19_v1_chr5_-_1523908 AB244719 AB463849	55357	-	TSC_hg19_v1_chr5_-_1524086 NM_024830	55485	-	S46955|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##EF174603|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##M95167|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##NM_001044|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##AB045223|CLPTM1L|81037|CLPTM1-like##DQ892147|CLPTM1L|81037|CLPTM1-like##DQ895343|CLPTM1L|81037|CLPTM1-like##AK027306|CLPTM1L|81037|CLPTM1-like##BC025305|CLPTM1L|81037|CLPTM1-like##NM_030782|CLPTM1L|81037|CLPTM1-like##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase##BC020166|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AK090444|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AB244719|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##NM_024830|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1	1.017729	CTCF.p2:-10:0.997
chr5	156680218	156680399	reg1008482.p2	3.884	+	BC094701 AB209622 D13720 NM_005546 BC109077 BC109078 AK312846 AK303609 AB590549	-72391	+	AY973323 CU692472 AF465821 BC025397 AK057543 BC022035 BC025409 BC025998 NM_130899	-87080	-	NM_001100816 TSC_hg19_v1_chr5_-_156569881 AK123613 AF031383 BC005250 BC006968 AK308393 NM_004270	-110456	-	TSC_hg19_v1_chr5_+_156693105 AL136549 NM_001037333 AK294220 AK295865 AK297401 AK303702 AB032994 AF160973 NM_001037332	12944	+	BC011762 BC021008 NM_014376	16048	+	AK289701 BC022570 NM_001001343	92392	-	AB209622|ITK|3702|IL2-inducible T-cell kinase##D13720|ITK|3702|IL2-inducible T-cell kinase##NM_005546|ITK|3702|IL2-inducible T-cell kinase##BC109077|ITK|3702|IL2-inducible T-cell kinase##BC109078|ITK|3702|IL2-inducible T-cell kinase##AK312846|ITK|3702|IL2-inducible T-cell kinase##AK303609|ITK|3702|IL2-inducible T-cell kinase##AY973323|FAM71B|153745|family with sequence similarity 71, member B##AF465821|FAM71B|153745|family with sequence similarity 71, member B##BC025397|FAM71B|153745|family with sequence similarity 71, member B##AK057543|FAM71B|153745|family with sequence similarity 71, member B##BC022035|FAM71B|153745|family with sequence similarity 71, member B##BC025409|FAM71B|153745|family with sequence similarity 71, member B##BC025998|FAM71B|153745|family with sequence similarity 71, member B##NM_130899|FAM71B|153745|family with sequence similarity 71, member B##NM_001100816|MED7|9443|mediator complex subunit 7##AF031383|MED7|9443|mediator complex subunit 7##BC005250|MED7|9443|mediator complex subunit 7##BC006968|MED7|9443|mediator complex subunit 7##AK308393|MED7|9443|mediator complex subunit 7##NM_004270|MED7|9443|mediator complex subunit 7##AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK289701|FNDC9|408263|fibronectin type III domain containing 9##BC022570|FNDC9|408263|fibronectin type III domain containing 9##NM_001001343|FNDC9|408263|fibronectin type III domain containing 9	0.0	
chr7	102067147	102067271	reg1037022.p2	3.884	+	NM_024653 TSC_hg19_v1_chr7_+_102036839 AK023964 BC014298 DQ893168 DQ896466 AK294664	-30367	+	TSC_hg19_v1_chr7_+_102023018 AK098134	-44176	+	TSC_hg19_v1_chr7_+_102004338 BC048257 BC066362	-62857	+	TSC_hg19_v1_chr7_+_102073995 NM_001126340 NM_032831	6768	+	TSC_hg19_v1_chr7_+_102074021 AK056497 AK027639 AK300574	6832	+	TSC_hg19_v1_chr7_-_102105305 CU678220 BC002820 BC017096	38024	-	NM_024653|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK023964|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##BC014298|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ893168|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ896466|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK294664|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##NM_001126340|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_032831|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK056497|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK027639|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK300574|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##BC002820|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##BC017096|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)	0.0	
chr7	44121961	44122065	reg1033309.p2	3.884	+	M18172 BC073741 BC001904 NM_000290	-16840	-	TSC_hg19_v1_chr7_+_44084324 AK300630 AF151364 BC031687 AB527593 CU680006 CU689228 AF197060 AF250287 CR457167	-37677	+	AK293340 TSC_hg19_v1_chr7_+_44084309 AK027367 BC011677	-37703	+	CU693204 TSC_hg19_v1_chr7_-_44122073 BC062590 BC035685 AF176097 AJ131891 AJ844643 AK307634 AK291638	46	-	BC049202 TSC_hg19_v1_chr7_-_44122083 AK092903 AX747799	72	-	TSC_hg19_v1_chr7_-_44122105 AK294449 BC026306 AK023002 NM_013284	103	-	M18172|PGAM2|5224|phosphoglycerate mutase 2 (muscle)##BC073741|PGAM2|5224|phosphoglycerate mutase 2 (muscle)##BC001904|PGAM2|5224|phosphoglycerate mutase 2 (muscle)##NM_000290|PGAM2|5224|phosphoglycerate mutase 2 (muscle)##AK300630|DBNL|28988|drebrin-like##AF151364|DBNL|28988|drebrin-like##BC031687|DBNL|28988|drebrin-like##AF197060|DBNL|28988|drebrin-like##AF250287|DBNL|28988|drebrin-like##CR457167|DBNL|28988|drebrin-like##AK293340|DBNL|28988|drebrin-like##AK027367|DBNL|28988|drebrin-like##BC011677|DBNL|28988|drebrin-like##BC062590|POLM|27434|polymerase (DNA directed), mu##BC035685|POLM|27434|polymerase (DNA directed), mu##AF176097|POLM|27434|polymerase (DNA directed), mu##AJ131891|POLM|27434|polymerase (DNA directed), mu##AK307634|POLM|27434|polymerase (DNA directed), mu##AK291638|POLM|27434|polymerase (DNA directed), mu##BC049202|POLM|27434|polymerase (DNA directed), mu##AK092903|POLM|27434|polymerase (DNA directed), mu##AK294449|POLM|27434|polymerase (DNA directed), mu##BC026306|POLM|27434|polymerase (DNA directed), mu##AK023002|POLM|27434|polymerase (DNA directed), mu##NM_013284|POLM|27434|polymerase (DNA directed), mu	0.0	
chr7	55433576	55433667	reg1032947.p1	3.884	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	-49	+	AK095857 NM_018697	-481	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-346675	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	206419	-	TSC_hg19_v1_chr7_-_55640073 AB097004	206461	-	BC016650 AK314338 TSC_hg19_v1_chr7_-_55640107	206484	-	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AB097004|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##BC016650|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK314338|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	0.025286	
chrX	137830791	137830908	reg1044420.p1	3.884	+	AF100144 NM_033642	-9335	-	BC012347 NM_004114 TSC_hg19_v1_chrX_-_137793839	-37012	-	AF100143 TSC_hg19_v1_chrX_-_137793504 AK289960 BC034340	-37395	-	NM_001139502	118867	-	AF108756 AK316170 TSC_hg19_v1_chrX_-_138286506	455621	-	AF199613 TSC_hg19_v1_chrX_-_138287166	456310	-	AF100144|FGF13|2258|fibroblast growth factor 13##NM_033642|FGF13|2258|fibroblast growth factor 13##BC012347|FGF13|2258|fibroblast growth factor 13##NM_004114|FGF13|2258|fibroblast growth factor 13##AF100143|FGF13|2258|fibroblast growth factor 13##AK289960|FGF13|2258|fibroblast growth factor 13##BC034340|FGF13|2258|fibroblast growth factor 13##NM_001139502|FGF13|2258|fibroblast growth factor 13##AF108756|FGF13|2258|fibroblast growth factor 13##AK316170|FGF13|2258|fibroblast growth factor 13##AF199613|FGF13|2258|fibroblast growth factor 13	0.90573	CTCF.p2:-17:0.906
chr10	52257721	52257878	reg1030454.p2	3.883	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-249459	-	NM_018232	-419914	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-430077	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	125904	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	241911	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	387594	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.0	
chr1	151881928	151882036	reg1034222.p1	3.883	+	TSC_hg19_v1_chr1_-_151881935 AK314852 AJ313515 BC017339	-55	-	HQ258137 BC101610 BC112239 AK095283 NM_182578	-55875	-	AK293673 NM_001136003	-68950	-	TSC_hg19_v1_chr1_-_151881988 BC065277	19	-	AK289494 NM_053055	378	-	M81457 TSC_hg19_v1_chr1_-_151966289 BC105786 M38591	84305	-	AK314852|THEM4|117145|thioesterase superfamily member 4##AJ313515|THEM4|117145|thioesterase superfamily member 4##BC017339|THEM4|117145|thioesterase superfamily member 4##HQ258137|THEM5|284486|thioesterase superfamily member 5##BC101610|THEM5|284486|thioesterase superfamily member 5##BC112239|THEM5|284486|thioesterase superfamily member 5##AK095283|THEM5|284486|thioesterase superfamily member 5##NM_182578|THEM5|284486|thioesterase superfamily member 5##AK293673|C2CD4D|100191040|C2 calcium-dependent domain containing 4D##NM_001136003|C2CD4D|100191040|C2 calcium-dependent domain containing 4D##BC065277|THEM4|117145|thioesterase superfamily member 4##AK289494|THEM4|117145|thioesterase superfamily member 4##NM_053055|THEM4|117145|thioesterase superfamily member 4##M81457|S100A10|6281|S100 calcium binding protein A10##BC105786|S100A10|6281|S100 calcium binding protein A10##M38591|S100A10|6281|S100 calcium binding protein A10	0.010503	
chr1	168335098	168335189	reg1032473.p2	3.883	+	AJ010277 NM_005149 BC093664 BC093666 EU446671	-84841	+	TSC_hg19_v1_chr1_+_168195262 BC068098 CU686619	-139850	+	TSC_hg19_v1_chr1_+_168195254 AK290325 NM_199344	-139892	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	178074	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	210649	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	363286	-	AJ010277|TBX19|9095|T-box 19##NM_005149|TBX19|9095|T-box 19##BC093664|TBX19|9095|T-box 19##BC093666|TBX19|9095|T-box 19##EU446671|TBX19|9095|T-box 19##BC068098|SFT2D2|375035|SFT2 domain containing 2##AK290325|SFT2D2|375035|SFT2 domain containing 2##NM_199344|SFT2D2|375035|SFT2 domain containing 2##BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin	0.914766	CTCF.p2:11:0.915
chr1	206736372	206736502	reg1034318.p1	3.883	+	TSC_hg19_v1_chr1_+_206730897 CU692112 EU831661	-5540	+	AL832784 AY261332 AK292039 TSC_hg19_v1_chr1_+_206730613	-5829	+	TSC_hg19_v1_chr1_+_206730542 BC042651 AY216268	-5917	+	DQ891590 DQ894784 TSC_hg19_v1_chr1_-_206785812 BC039134 BC058905 AK225259 BC001585 AF220417 AF262403 AK294536 AK001852	49318	-	TSC_hg19_v1_chr1_-_206785905 NM_001201478 NM_006893	49446	-	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	72407	+	EU831661|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AL832784|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY261332|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AK292039|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC042651|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY216268|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##DQ891590|EIF2D|1939|eukaryotic translation initiation factor 2D##DQ894784|EIF2D|1939|eukaryotic translation initiation factor 2D##BC039134|EIF2D|1939|eukaryotic translation initiation factor 2D##BC058905|EIF2D|1939|eukaryotic translation initiation factor 2D##AK225259|EIF2D|1939|eukaryotic translation initiation factor 2D##BC001585|EIF2D|1939|eukaryotic translation initiation factor 2D##AF220417|EIF2D|1939|eukaryotic translation initiation factor 2D##AF262403|EIF2D|1939|eukaryotic translation initiation factor 2D##AK294536|EIF2D|1939|eukaryotic translation initiation factor 2D##AK001852|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_001201478|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_006893|EIF2D|1939|eukaryotic translation initiation factor 2D##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3	0.0	
chr21	35348642	35348822	reg1010494.p4	3.883	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-60640	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-158062	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-333877	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	97109	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	97197	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	387614	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.0	
chr2	141867314	141867418	reg1035597.p1	3.883	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-2329560	-	TSC_hg19_v1_chr2_+_139259500 AK021919	-2607876	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-2607973	+	TSC_hg19_v1_chr2_-_142888540 AK054663	1021190	-	AF176832 NM_018557	1021903	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	1767840	+	AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase	0.011537	
chr4	114683928	114684108	reg1014704.p4	3.883	+	TSC_hg19_v1_chr4_-_114682923 NM_001221 NM_172114 NM_172115 NM_172127 NM_172128 NM_172129	-1048	-	TSC_hg19_v1_chr4_-_114682619 AK055642 AB209288	-1362	-	BC022558 TSC_hg19_v1_chr4_-_114682567	-1452	-	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	216821	-	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	835565	+	NM_003360 U30930	859504	+	NM_001221|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172114|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172115|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172127|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172128|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172129|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK055642|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AB209288|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC022558|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8	0.0	
chr6	167412435	167412558	reg1035916.p2	3.883	+	AK315467 TSC_hg19_v1_chr6_-_167370038 BC036282 NM_003730	-42439	-	TSC_hg19_v1_chr6_-_167370030 BC001660 BC001819 BC039713 BC051912 AJ419865 AJ419866 AJ419867 U85625	-42486	-	DQ884402 TSC_hg19_v1_chr6_-_167369732	-42794	-	TSC_hg19_v1_chr6_+_167412884 NM_007045 NM_194429 Y18046 AK294950 AK289846 BX647686 AK312791 BC011902 AB590215 CU680104 DQ893037 DQ896278 AJ420472	357	+	NM_004367	112798	+	NM_031409 U68031 U68030	123753	+	AK315467|RNASET2|8635|ribonuclease T2##BC036282|RNASET2|8635|ribonuclease T2##NM_003730|RNASET2|8635|ribonuclease T2##BC001660|RNASET2|8635|ribonuclease T2##BC001819|RNASET2|8635|ribonuclease T2##BC039713|RNASET2|8635|ribonuclease T2##BC051912|RNASET2|8635|ribonuclease T2##AJ419865|RNASET2|8635|ribonuclease T2##AJ419866|RNASET2|8635|ribonuclease T2##AJ419867|RNASET2|8635|ribonuclease T2##U85625|RNASET2|8635|ribonuclease T2##NM_007045|FGFR1OP|11116|FGFR1 oncogene partner##NM_194429|FGFR1OP|11116|FGFR1 oncogene partner##Y18046|FGFR1OP|11116|FGFR1 oncogene partner##AK294950|FGFR1OP|11116|FGFR1 oncogene partner##AK289846|FGFR1OP|11116|FGFR1 oncogene partner##AK312791|FGFR1OP|11116|FGFR1 oncogene partner##BC011902|FGFR1OP|11116|FGFR1 oncogene partner##DQ893037|FGFR1OP|11116|FGFR1 oncogene partner##DQ896278|FGFR1OP|11116|FGFR1 oncogene partner##AJ420472|FGFR1OP|11116|FGFR1 oncogene partner##NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6	0.0	
chr6_cox_hap2	1962039	1962136	reg1034162.p1	3.883	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.01334	
chr7	5271559	5271643	reg1030810.p1	3.883	+	BC016912 AF151808 NM_001033520 AY691426	-17709	+	TSC_hg19_v1_chr7_+_5229923 AB463348 AM392901 AM393618 AM393628 CU675721 AY691425 CR533530	-41616	+	TSC_hg19_v1_chr7_+_5229917 BC021012 BC021068	-41686	+	TSC_hg19_v1_chr7_+_5322595 AY485959 NM_001040661 NM_153247 AK092242 AX747426 AK296278 BC047592 BC025325	51005	+	TSC_hg19_v1_chr7_-_5460842 BC140723	189305	-	AY129022 TSC_hg19_v1_chr7_-_5461555	189940	-	BC016912|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AF151808|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033520|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY691426|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM392901|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM393618|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM393628|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY691425|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##CR533530|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021012|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021068|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY485959|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##NM_001040661|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##NM_153247|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AK092242|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AK296278|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC047592|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC025325|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AY129022|TNRC18|84629|trinucleotide repeat containing 18	0.0	
chr8	21952849	21952943	reg1024141.p1	3.883	+	TSC_hg19_v1_chr8_+_21946730 AK294646	-6149	+	TSC_hg19_v1_chr8_+_21946666 AK126408 NM_022749 BC052237	-6218	+	TSC_hg19_v1_chr8_+_21924371 CU675345 DQ892779 DQ896026 EU832675 EU832755 BT007396	-28519	+	CU677759 AK026147 TSC_hg19_v1_chr8_-_21966936 BC016902 NM_024815	13992	-	TSC_hg19_v1_chr8_-_21988524 NM_005144 NM_018411	35694	-	AY562242 CR457353 AK025930 AF218014 AK302352 TSC_hg19_v1_chr8_-_21999400 BC050622 AK025899 AK172846 BC013048 NM_025232	46331	-	AK294646|FAM160B2|64760|family with sequence similarity 160, member B2##AK126408|FAM160B2|64760|family with sequence similarity 160, member B2##NM_022749|FAM160B2|64760|family with sequence similarity 160, member B2##BC052237|FAM160B2|64760|family with sequence similarity 160, member B2##DQ892779|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##DQ896026|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##EU832675|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##EU832755|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##BT007396|EPB49|2039|erythrocyte membrane protein band 4.9 (dematin)##AK026147|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##BC016902|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##NM_024815|NUDT18|79873|nudix (nucleoside diphosphate linked moiety X)-type motif 18##NM_005144|HR|55806|hairless homolog (mouse)##NM_018411|HR|55806|hairless homolog (mouse)##AY562242|REEP4|80346|receptor accessory protein 4##CR457353|REEP4|80346|receptor accessory protein 4##AK025930|REEP4|80346|receptor accessory protein 4##AF218014|REEP4|80346|receptor accessory protein 4##AK302352|REEP4|80346|receptor accessory protein 4##BC050622|REEP4|80346|receptor accessory protein 4##AK025899|REEP4|80346|receptor accessory protein 4##AK172846|REEP4|80346|receptor accessory protein 4##BC013048|REEP4|80346|receptor accessory protein 4##NM_025232|REEP4|80346|receptor accessory protein 4	0.761178	CTCF.p2:10:0.761
chr9	79034827	79034983	reg1034452.p2	3.883	+	BC015473 TSC_hg19_v1_chr9_-_79009434 BC007069 AK002011 AK307079 AK315734 NM_018339	-25514	-	TSC_hg19_v1_chr9_+_78505588 NM_001190482 NM_006200 AK056202 AK225773 AK310862 AX805774 BC012064	-529270	+	TSC_hg19_v1_chr9_+_77703429 AK291511 AK222596 U63717 BC007459 AB528711 CU675669	-1331395	+	AY196293 NM_001097634	21676	+	NM_001097633 NM_001490 TSC_hg19_v1_chr9_+_79074142 AY196294 AY196295 AL832647	39211	+	AY196296 NM_001097635	58351	+	BC007069|RFK|55312|riboflavin kinase##AK002011|RFK|55312|riboflavin kinase##AK307079|RFK|55312|riboflavin kinase##AK315734|RFK|55312|riboflavin kinase##NM_018339|RFK|55312|riboflavin kinase##NM_001190482|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##NM_006200|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK056202|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK225773|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK310862|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##BC012064|PCSK5|5125|proprotein convertase subtilisin/kexin type 5##AK291511|OSTF1|26578|osteoclast stimulating factor 1##AK222596|OSTF1|26578|osteoclast stimulating factor 1##U63717|OSTF1|26578|osteoclast stimulating factor 1##BC007459|OSTF1|26578|osteoclast stimulating factor 1##AY196293|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097634|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097633|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001490|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196294|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196295|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AL832647|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##AY196296|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2##NM_001097635|GCNT1|2650|glucosaminyl (N-acetyl) transferase 1, core 2	0.903137	CTCF.p2:-5:0.903
chrX	11381327	11381421	reg1039161.p1	3.883	+	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	-69832	+	AF177663 NM_013423 AK297713	-97266	-	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	-251905	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	302446	-	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	394969	+	NM_001193270 AK300814	395343	+	AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase##AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	0.0	
chrY	27637923	27638023	reg1030603.p2	3.883	+	AF000980 NM_001002760 NM_001002761 NM_004678	-439723	-	NM_001005375 NM_020364 NM_020420 NM_001005785 NM_001005786 AF414184 BC047480 BC036648 BC047617 U21663 AF248480 AF248482 AF248481 BC113005 BC113006	-657900	+	BC113005 BC047617 BC047480 NM_020364 NM_020420	-678443	-	AK292375 BC033041 NM_001003894 NM_001003895 NM_004680 NM_170723 AK292318 AF000981 AF080597	130301	+	AK289543 AK311508 NM_005840 AK125483	31462467	+	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	31576024	+	AF000980|BPY2|9083|basic charge, Y-linked, 2##NM_001002760|BPY2B|442867|basic charge, Y-linked, 2B##NM_001002761|BPY2C|442868|basic charge, Y-linked, 2C##NM_004678|BPY2|9083|basic charge, Y-linked, 2##NM_001005375|DAZ4|57135|deleted in azoospermia 4##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##NM_001005785|DAZ2|57055|deleted in azoospermia 2##NM_001005786|DAZ2|57055|deleted in azoospermia 2##AF414184|DAZ2|57055|deleted in azoospermia 2##BC047480|DAZ4|57135|deleted in azoospermia 4##BC036648|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##U21663|DAZ2|57055|deleted in azoospermia 2##AF248480|DAZ2|57055|deleted in azoospermia 2##AF248482|DAZ4|57135|deleted in azoospermia 4##AF248481|DAZ3|57054|deleted in azoospermia 3##BC113005|DAZ3|57054|deleted in azoospermia 3##BC113006|DAZ2|57055|deleted in azoospermia 2##BC113005|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##BC047480|DAZ4|57135|deleted in azoospermia 4##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##AK292375|CDY1|9085|chromodomain protein, Y-linked, 1##BC033041|CDY1|9085|chromodomain protein, Y-linked, 1##NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1##NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1##AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B##AF000981|CDY1|9085|chromodomain protein, Y-linked, 1##AF080597|CDY1|9085|chromodomain protein, Y-linked, 1##AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7	0.919612	CTCF.p2:-3:0.920
chr11	27938139	27938223	reg1034017.p1	3.882	+	EF689021 NM_170731	-194577	-	AB038671 AY054393 AY054394 AY054395 EF674517 EF674518 EF674519 NM_001143805 NM_001143806 NM_170732	-195907	-	AY054396 EF674520 NM_001143807	-196939	-	AB062483 TSC_hg19_v1_chr11_-_28129684 AY791349	191484	-	TSC_hg19_v1_chr11_-_28129692 AK312576 BC035917 AL136819	191511	-	TSC_hg19_v1_chr11_-_28129704 BC026090 NM_031217	191542	-	EF689021|BDNF|627|brain-derived neurotrophic factor##NM_170731|BDNF|627|brain-derived neurotrophic factor##AB038671|BDNF|627|brain-derived neurotrophic factor##AY054393|BDNF|627|brain-derived neurotrophic factor##AY054394|BDNF|627|brain-derived neurotrophic factor##AY054395|BDNF|627|brain-derived neurotrophic factor##EF674517|BDNF|627|brain-derived neurotrophic factor##EF674518|BDNF|627|brain-derived neurotrophic factor##EF674519|BDNF|627|brain-derived neurotrophic factor##NM_001143805|BDNF|627|brain-derived neurotrophic factor##NM_001143806|BDNF|627|brain-derived neurotrophic factor##NM_170732|BDNF|627|brain-derived neurotrophic factor##AY054396|BDNF|627|brain-derived neurotrophic factor##EF674520|BDNF|627|brain-derived neurotrophic factor##NM_001143807|BDNF|627|brain-derived neurotrophic factor##AB062483|KIF18A|81930|kinesin family member 18A##AY791349|KIF18A|81930|kinesin family member 18A##AK312576|KIF18A|81930|kinesin family member 18A##BC035917|KIF18A|81930|kinesin family member 18A##AL136819|KIF18A|81930|kinesin family member 18A##BC026090|KIF18A|81930|kinesin family member 18A##NM_031217|KIF18A|81930|kinesin family member 18A	0.0	
chr1	202779837	202779968	reg1032801.p2	3.882	+	AF087481 NM_006618 TSC_hg19_v1_chr1_-_202777550	-2342	-	TSC_hg19_v1_chr1_-_202777541 AJ132440	-2375	-	TSC_hg19_v1_chr1_-_202776401 AK122752	-3458	-	BC049825 TSC_hg19_v1_chr1_-_202830655 BC040684 AX721218	50780	-	AB464114 BT007133 U74324 TSC_hg19_v1_chr1_-_202858251 S78873 BC018488 BC037392 AK311900 AK223538 NM_002871	78402	-	TSC_hg19_v1_chr1_-_202896338 AF190900 AK223072 BC003183 BC004175	116431	-	AF087481|KDM5B|10765|lysine (K)-specific demethylase 5B##NM_006618|KDM5B|10765|lysine (K)-specific demethylase 5B##AJ132440|KDM5B|10765|lysine (K)-specific demethylase 5B##AK122752|KDM5B|10765|lysine (K)-specific demethylase 5B##BT007133|RABIF|5877|RAB interacting factor##U74324|RABIF|5877|RAB interacting factor##S78873|RABIF|5877|RAB interacting factor##BC018488|RABIF|5877|RAB interacting factor##BC037392|RABIF|5877|RAB interacting factor##AK311900|RABIF|5877|RAB interacting factor##AK223538|RABIF|5877|RAB interacting factor##NM_002871|RABIF|5877|RAB interacting factor##AF190900|KLHL12|59349|kelch-like 12 (Drosophila)##AK223072|KLHL12|59349|kelch-like 12 (Drosophila)##BC003183|KLHL12|59349|kelch-like 12 (Drosophila)##BC004175|KLHL12|59349|kelch-like 12 (Drosophila)	0.0	
chr12	21449874	21449991	reg1042803.p1	3.882	+	BC020696 NM_006446 BC070172 AB026257 BC114376 BC054878 BC105596 AK312970	-165796	+	AF401642 NM_001009562	-281303	+	BC058006 BC105597 NM_019844 BC022843 AK055874 BC070264	-486284	+	NM_021094 AK296044	37900	-	NM_000415 J04422 X14904	75896	+	AF279784 NM_134431	98438	-	BC020696|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##NM_006446|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC070172|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AB026257|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC114376|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC054878|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC105596|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AK312970|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AF401642|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)##NM_001009562|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)##BC058006|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC105597|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_019844|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC022843|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##AK055874|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC070264|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_021094|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2##AK296044|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2##NM_000415|IAPP|3375|islet amyloid polypeptide##J04422|IAPP|3375|islet amyloid polypeptide##X14904|IAPP|3375|islet amyloid polypeptide##AF279784|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2##NM_134431|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2	0.045622	
chr1	32719241	32719404	reg1034012.p1	3.882	+	NM_005356 TSC_hg19_v1_chr1_+_32716847 AK098027 X05027 U23852 M36881 X13529	-2437	+	NM_032648 BC004269	-6497	+	TSC_hg19_v1_chr1_-_32707234 AL833686 AK055560	-12067	-	NM_001042771 BC013200 AK303073 U07236 CU680550 DQ891675 DQ894861 AB527809 AJ865079 AF228313	20518	+	AK225555 TSC_hg19_v1_chr1_+_32757704 AK296308 AK313061	38381	+	D50405 NM_004964 TSC_hg19_v1_chr1_+_32757707	38386	+	NM_005356|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK098027|LCK|3932|lymphocyte-specific protein tyrosine kinase##X05027|LCK|3932|lymphocyte-specific protein tyrosine kinase##U23852|LCK|3932|lymphocyte-specific protein tyrosine kinase##M36881|LCK|3932|lymphocyte-specific protein tyrosine kinase##X13529|LCK|3932|lymphocyte-specific protein tyrosine kinase##NM_032648|FAM167B|84734|family with sequence similarity 167, member B##BC004269|FAM167B|84734|family with sequence similarity 167, member B##AL833686|MTMR9LP|339483|myotubularin related protein 9-like, pseudogene##AK055560|MTMR9LP|339483|myotubularin related protein 9-like, pseudogene##NM_001042771|LCK|3932|lymphocyte-specific protein tyrosine kinase##BC013200|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK303073|LCK|3932|lymphocyte-specific protein tyrosine kinase##U07236|LCK|3932|lymphocyte-specific protein tyrosine kinase##DQ891675|LCK|3932|lymphocyte-specific protein tyrosine kinase##DQ894861|LCK|3932|lymphocyte-specific protein tyrosine kinase##AJ865079|LCK|3932|lymphocyte-specific protein tyrosine kinase##AF228313|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK225555|HDAC1|3065|histone deacetylase 1##AK296308|HDAC1|3065|histone deacetylase 1##AK313061|HDAC1|3065|histone deacetylase 1##D50405|HDAC1|3065|histone deacetylase 1##NM_004964|HDAC1|3065|histone deacetylase 1	0.0	
chr16	67232277	67232372	reg1036224.p1	3.882	+	TSC_hg19_v1_chr16_+_67226106 BC021050 BC033180 X86096 AB451292 AB451425 DQ892803	-6198	+	TSC_hg19_v1_chr16_+_67226087 BC010079 BC031071 S75174	-6241	+	TSC_hg19_v1_chr16_+_67226057 NM_001950 U15641	-6277	+	AK056923 AK300976 NM_024712 TSC_hg19_v1_chr16_+_67233033	709	+	BC018785 NM_012163	28396	-	NM_001004055 AF176701 AK316602 AK298088	28590	-	BC021050|E2F4|1874|E2F transcription factor 4, p107/p130-binding##BC033180|E2F4|1874|E2F transcription factor 4, p107/p130-binding##X86096|E2F4|1874|E2F transcription factor 4, p107/p130-binding##AB451292|E2F4|1874|E2F transcription factor 4, p107/p130-binding##AB451425|E2F4|1874|E2F transcription factor 4, p107/p130-binding##DQ892803|E2F4|1874|E2F transcription factor 4, p107/p130-binding##BC031071|E2F4|1874|E2F transcription factor 4, p107/p130-binding##S75174|E2F4|1874|E2F transcription factor 4, p107/p130-binding##NM_001950|E2F4|1874|E2F transcription factor 4, p107/p130-binding##U15641|E2F4|1874|E2F transcription factor 4, p107/p130-binding##AK056923|ELMO3|79767|engulfment and cell motility 3##AK300976|ELMO3|79767|engulfment and cell motility 3##NM_024712|ELMO3|79767|engulfment and cell motility 3##BC018785|LRRC29|26231|leucine rich repeat containing 29##NM_012163|LRRC29|26231|leucine rich repeat containing 29##NM_001004055|LRRC29|26231|leucine rich repeat containing 29##AF176701|LRRC29|26231|leucine rich repeat containing 29##AK316602|LRRC29|26231|leucine rich repeat containing 29##AK298088|LRRC29|26231|leucine rich repeat containing 29	0.950293	CTCF.p2:-18:0.936
chr19	12095864	12095956	reg1029346.p1	3.882	+	AK092240 AK299224 AX747424 NM_001012753 BC105711 BC105712 BC105713	-20028	+	TSC_hg19_v1_chr19_+_12035889 AK299182 AK308305 AL136732 NM_144566 BC144406 BC136777	-59992	+	TSC_hg19_v1_chr19_+_11998643 BC051309 NM_021915 EU446913	-97237	+	TSC_hg19_v1_chr19_-_12146492 AK129553 BC047412	50579	-	TSC_hg19_v1_chr19_-_12146530 AK098300 NM_001080411	50631	-	NM_001080404	67871	-	AK092240|ZNF763|284390|zinc finger protein 763##AK299224|ZNF763|284390|zinc finger protein 763##NM_001012753|ZNF763|284390|zinc finger protein 763##BC105711|ZNF763|284390|zinc finger protein 763##BC105712|ZNF763|284390|zinc finger protein 763##BC105713|ZNF763|284390|zinc finger protein 763##AK299182|ZNF763|284390|zinc finger protein 763##AK308305|ZNF700|90592|zinc finger protein 700##AL136732|ZNF700|90592|zinc finger protein 700##NM_144566|ZNF700|90592|zinc finger protein 700##BC144406|ZNF700|90592|zinc finger protein 700##BC136777|ZNF700|90592|zinc finger protein 700##BC051309|ZNF69|7620|zinc finger protein 69##NM_021915|ZNF69|7620|zinc finger protein 69##EU446913|ZNF69|7620|zinc finger protein 69##BC047412|ZNF433|163059|zinc finger protein 433##AK098300|ZNF433|163059|zinc finger protein 433##NM_001080411|ZNF433|163059|zinc finger protein 433##NM_001080404|ZNF878|729747|zinc finger protein 878	0.920347	CTCF.p2:9:0.896
chr2	43355905	43355972	reg1044130.p2	3.882	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-336187	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-364638	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-560041	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	97407	-	TSC_hg19_v1_chr2_-_43453736 BC020369	97792	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	97804	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.0	
chrX	70401761	70401883	reg1036706.p2	3.882	+	TSC_hg19_v1_chrX_+_70364730 BC051715	-37082	+	TSC_hg19_v1_chrX_+_70364710 AF217411 AX773948 AX773949	-37109	+	NM_001166660 NM_018977 NM_181303 BX641059 TSC_hg19_v1_chrX_+_70364698 BC028738 AK299669	-37133	+	TSC_hg19_v1_chrX_+_70435056 NM_001097642	33232	+	TSC_hg19_v1_chrX_+_70435092 BC039198 X04325	33273	+	NM_000166 BC022426 AK313474 BC002805	41278	+	BC051715|NLGN3|54413|neuroligin 3##AF217411|NLGN3|54413|neuroligin 3##NM_001166660|NLGN3|54413|neuroligin 3##NM_018977|NLGN3|54413|neuroligin 3##NM_181303|NLGN3|54413|neuroligin 3##BX641059|NLGN3|54413|neuroligin 3##BC028738|NLGN3|54413|neuroligin 3##AK299669|NLGN3|54413|neuroligin 3##NM_001097642|GJB1|2705|gap junction protein, beta 1, 32kDa##BC039198|GJB1|2705|gap junction protein, beta 1, 32kDa##X04325|GJB1|2705|gap junction protein, beta 1, 32kDa##NM_000166|GJB1|2705|gap junction protein, beta 1, 32kDa##BC022426|GJB1|2705|gap junction protein, beta 1, 32kDa##AK313474|GJB1|2705|gap junction protein, beta 1, 32kDa##BC002805|GJB1|2705|gap junction protein, beta 1, 32kDa	0.0	
chr1	25969092	25969174	reg1032131.p1	3.881	+	AB209275 TSC_hg19_v1_chr1_+_25944698	-24478	+	AF261655 NM_020379	-25175	+	TSC_hg19_v1_chr1_+_25870146 BC029770 AL117654 AB528624	-98969	+	TSC_hg19_v1_chr1_+_26126678 AJ306399 NM_020451 NM_206926	157535	+	TSC_hg19_v1_chr1_+_26146429 NM_001099625 NM_001099627 BX647921	177277	+	TSC_hg19_v1_chr1_+_26146468 AB075880 AK314297 AK299221 AF173891	177338	+	AB209275|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##BC029770|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AL117654|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AJ306399|SEPN1|57190|selenoprotein N, 1##NM_020451|SEPN1|57190|selenoprotein N, 1##NM_206926|SEPN1|57190|selenoprotein N, 1##NM_001099625|FAM54B|56181|family with sequence similarity 54, member B##NM_001099627|FAM54B|56181|family with sequence similarity 54, member B##BX647921|FAM54B|56181|family with sequence similarity 54, member B##AB075880|FAM54B|56181|family with sequence similarity 54, member B##AK314297|FAM54B|56181|family with sequence similarity 54, member B##AK299221|FAM54B|56181|family with sequence similarity 54, member B##AF173891|FAM54B|56181|family with sequence similarity 54, member B	0.0	
chr15	31653650	31653813	reg1041361.p2	3.881	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-34393	+	NM_001243538	-130682	-	GQ502181 HM135791 NM_001252020	-200303	-	AJ430383 NM_130901	293810	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	509098	-	TSC_hg19_v1_chr15_-_32162898 AK126002	509212	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr15	59274267	59274378	reg1032555.p2	3.881	+	TSC_hg19_v1_chr15_-_59225851 BC140851 NM_001013843 NM_024755	-48491	-	AK000867 TSC_hg19_v1_chr15_-_59225776 AK055195 BC108656 AK291423 AK131242	-48540	-	BC060514 TSC_hg19_v1_chr15_+_59063500 AK297291 AK075319 AB075509 BC140811 BC144616	-210800	+	TSC_hg19_v1_chr15_+_59279864 BC060862 BX538130 NM_017610	5535	+	BX647259 TSC_hg19_v1_chr15_+_59280332 AK131304	5957	+	TSC_hg19_v1_chr15_+_59359061 AK095327	84756	+	BC140851|SLTM|79811|SAFB-like, transcription modulator##NM_001013843|SLTM|79811|SAFB-like, transcription modulator##NM_024755|SLTM|79811|SAFB-like, transcription modulator##AK000867|SLTM|79811|SAFB-like, transcription modulator##AK055195|SLTM|79811|SAFB-like, transcription modulator##BC108656|SLTM|79811|SAFB-like, transcription modulator##AK291423|SLTM|79811|SAFB-like, transcription modulator##AK131242|SLTM|79811|SAFB-like, transcription modulator##BC060514|FAM63B|54629|family with sequence similarity 63, member B##AK297291|FAM63B|54629|family with sequence similarity 63, member B##AK075319|FAM63B|54629|family with sequence similarity 63, member B##AB075509|FAM63B|54629|family with sequence similarity 63, member B##BC140811|FAM63B|54629|family with sequence similarity 63, member B##BC144616|FAM63B|54629|family with sequence similarity 63, member B##BC060862|RNF111|54778|ring finger protein 111##BX538130|RNF111|54778|ring finger protein 111##NM_017610|RNF111|54778|ring finger protein 111##BX647259|RNF111|54778|ring finger protein 111##AK131304|RNF111|54778|ring finger protein 111##AK095327|RNF111|54778|ring finger protein 111	0.0	
chr19	14097532	14097662	reg1022665.p2	3.881	+	AK027100 AK298489 NM_001146254 NM_001146255	-33400	-	BC080575 NM_138353 TSC_hg19_v1_chr19_+_14063318	-34279	+	TSC_hg19_v1_chr19_+_14063308 AK093072 AX747902	-34299	+	TSC_hg19_v1_chr19_-_14116878 X58964	19317	-	BC049826 TSC_hg19_v1_chr19_-_14117133 AK309824 NM_002918	19532	-	BC140935 AB076563 AF447451 BC110069 NM_080864	41390	+	AK027100|PODNL1|79883|podocan-like 1##AK298489|PODNL1|79883|podocan-like 1##NM_001146254|PODNL1|79883|podocan-like 1##NM_001146255|PODNL1|79883|podocan-like 1##BC080575|DCAF15|90379|DDB1 and CUL4 associated factor 15##NM_138353|DCAF15|90379|DDB1 and CUL4 associated factor 15##AK093072|DCAF15|90379|DDB1 and CUL4 associated factor 15##X58964|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##BC049826|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##AK309824|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##NM_002918|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##BC140935|RLN3|117579|relaxin 3##AB076563|RLN3|117579|relaxin 3##AF447451|RLN3|117579|relaxin 3##BC110069|RLN3|117579|relaxin 3##NM_080864|RLN3|117579|relaxin 3	0.0	
chr2	112456785	112456949	reg1036170.p2	3.881	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-578380	+	AK300513 NM_001142807 BC022268	-966688	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-1021045	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	184759	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	184894	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	199318	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.0	
chr21	37497949	37498068	reg1038840.p1	3.881	+	TSC_hg19_v1_chr21_+_37442321 AK294142 J04056 AK308691 AK311219 BC015640 AK314879 BC002511 DQ892353 DQ895559 BT019843 CR541708	-55653	+	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	-55755	+	BC036556 TSC_hg19_v1_chr21_-_37432809 AK300009 NM_017438	-65192	-	AB041012 NM_001236 AB124847 TSC_hg19_v1_chr21_+_37507383 AK223429 BC002812 AB004854 CR541709	9341	+	TSC_hg19_v1_chr21_-_37528616 AB004851 BC037580 BC047014	30623	-	AJ237839 NM_005128	38830	+	AK294142|CBR1|873|carbonyl reductase 1##J04056|CBR1|873|carbonyl reductase 1##AK308691|CBR1|873|carbonyl reductase 1##AK311219|CBR1|873|carbonyl reductase 1##BC015640|CBR1|873|carbonyl reductase 1##AK314879|CBR1|873|carbonyl reductase 1##BC002511|CBR1|873|carbonyl reductase 1##DQ892353|CBR1|873|carbonyl reductase 1##DQ895559|CBR1|873|carbonyl reductase 1##BT019843|CBR1|873|carbonyl reductase 1##CR541708|CBR1|873|carbonyl reductase 1##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1##BC036556|SETD4|54093|SET domain containing 4##AK300009|SETD4|54093|SET domain containing 4##NM_017438|SETD4|54093|SET domain containing 4##AB041012|CBR3|874|carbonyl reductase 3##NM_001236|CBR3|874|carbonyl reductase 3##AB124847|CBR3|874|carbonyl reductase 3##AK223429|CBR3|874|carbonyl reductase 3##BC002812|CBR3|874|carbonyl reductase 3##AB004854|CBR3|874|carbonyl reductase 3##CR541709|CBR3|874|carbonyl reductase 3##AB004851|LOC100506428|100506428|uncharacterized LOC100506428##BC037580|LOC100506428|100506428|uncharacterized LOC100506428##BC047014|LOC100506428|100506428|uncharacterized LOC100506428##AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2	0.0	
chr22	20193957	20194028	reg1035190.p1	3.881	+	NM_001243537	-56562	-	TSC_hg19_v1_chr22_+_20119357 AY894890 BC053544 NM_001185024 NM_013373 AK131238	-74559	+	TSC_hg19_v1_chr22_+_20105145 AB587487 CU013156 CU013444	-88835	+	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	61775	-	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	113577	-	NM_001242313	183676	+	NM_001243537|LOC388849|388849|uncharacterized LOC388849##AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8##BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8##AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8##CU013156|RANBP1|5902|RAN binding protein 1##CU013444|RANBP1|5902|RAN binding protein 1##AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_001242313|TMEM191B|728229|transmembrane protein 191B	0.0	
chr5	61439584	61439686	reg1038765.p1	3.881	+	AK094862 NM_173667	-506000	+	TSC_hg19_v1_chr5_+_60628085 NM_020928	-811537	+	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	-981368	-	TSC_hg19_v1_chr5_+_61601970 NM_001098511 NM_001243952 NM_001243953 NM_004520	162338	+	TSC_hg19_v1_chr5_+_61602066 BC047544	162447	+	TSC_hg19_v1_chr5_+_61602278 AK297347 AK307880 EF560716 EF560728 EU832810 GQ129246 AK315866	162635	+	AK094862|C5orf64|285668|chromosome 5 open reading frame 64##NM_173667|C5orf64|285668|chromosome 5 open reading frame 64##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6##BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##NM_001098511|KIF2A|3796|kinesin heavy chain member 2A##NM_001243952|KIF2A|3796|kinesin heavy chain member 2A##NM_001243953|KIF2A|3796|kinesin heavy chain member 2A##NM_004520|KIF2A|3796|kinesin heavy chain member 2A##BC047544|KIF2A|3796|kinesin heavy chain member 2A##AK297347|KIF2A|3796|kinesin heavy chain member 2A##AK307880|KIF2A|3796|kinesin heavy chain member 2A##EF560716|KIF2A|3796|kinesin heavy chain member 2A##EF560728|KIF2A|3796|kinesin heavy chain member 2A##EU832810|KIF2A|3796|kinesin heavy chain member 2A##GQ129246|KIF2A|3796|kinesin heavy chain member 2A##AK315866|KIF2A|3796|kinesin heavy chain member 2A	0.958034	CTCF.p2:18:0.958
chr6	109695106	109695256	reg1032599.p1	3.881	+	BC033448 NM_173830	-244675	+	TSC_hg19_v1_chr6_+_109416697 AK092723 AX747690 AK289910	-278464	+	NM_001083535 BC064365	-278824	+	AK310854 TSC_hg19_v1_chr6_-_109702904	7723	-	TSC_hg19_v1_chr6_-_109703588 AF106518 AF263279 AF299341 DQ891034 DQ894213	8394	-	TSC_hg19_v1_chr6_-_109703614 AK315908 AK298684 AK303525	8427	-	BC033448|CEP57L1|285753|centrosomal protein 57kDa-like 1##NM_173830|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK092723|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK289910|CEP57L1|285753|centrosomal protein 57kDa-like 1##NM_001083535|CEP57L1|285753|centrosomal protein 57kDa-like 1##BC064365|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK310854|CD164|8763|CD164 molecule, sialomucin##AF106518|CD164|8763|CD164 molecule, sialomucin##AF263279|CD164|8763|CD164 molecule, sialomucin##AF299341|CD164|8763|CD164 molecule, sialomucin##DQ891034|CD164|8763|CD164 molecule, sialomucin##DQ894213|CD164|8763|CD164 molecule, sialomucin##AK315908|CD164|8763|CD164 molecule, sialomucin##AK298684|CD164|8763|CD164 molecule, sialomucin##AK303525|CD164|8763|CD164 molecule, sialomucin	0.0	
chr10	74855491	74855625	reg1012246.p2	3.880	+	AK311349 TSC_hg19_v1_chr10_-_74714574	-140986	-	AF349540 BC093996 BC111946 BC143532 AY358032 NM_032562 AF339053 AK313712 TSC_hg19_v1_chr10_-_74714543	-141047	-	AK096435 NM_152635 BC126440 AY358339 AY013707 TSC_hg19_v1_chr10_+_74653529	-202125	+	TSC_hg19_v1_chr10_-_74856621 M24486 M24487 AK312593 AK222960 BC034998	1047	-	TSC_hg19_v1_chr10_-_74856725 NM_000917 NM_001017962 NM_001142595 NM_001142596	1212	-	NM_015901 BC031224 AK303235 TSC_hg19_v1_chr10_+_74870272 AK300980 AK309755 AK316538 BC046173 BC038833	14693	+	AK311349|PLA2G12B|84647|phospholipase A2, group XIIB##AF349540|PLA2G12B|84647|phospholipase A2, group XIIB##BC093996|PLA2G12B|84647|phospholipase A2, group XIIB##BC111946|PLA2G12B|84647|phospholipase A2, group XIIB##BC143532|PLA2G12B|84647|phospholipase A2, group XIIB##AY358032|PLA2G12B|84647|phospholipase A2, group XIIB##NM_032562|PLA2G12B|84647|phospholipase A2, group XIIB##AF339053|PLA2G12B|84647|phospholipase A2, group XIIB##AK313712|PLA2G12B|84647|phospholipase A2, group XIIB##AK096435|OIT3|170392|oncoprotein induced transcript 3##NM_152635|OIT3|170392|oncoprotein induced transcript 3##BC126440|OIT3|170392|oncoprotein induced transcript 3##AY358339|OIT3|170392|oncoprotein induced transcript 3##AY013707|OIT3|170392|oncoprotein induced transcript 3##M24486|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##M24487|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##AK312593|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##AK222960|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##BC034998|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_000917|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001017962|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001142595|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001142596|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_015901|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC031224|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK303235|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK300980|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK309755|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK316538|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC046173|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC038833|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13	0.0	
chr11	9779385	9779475	reg1008352.p1	3.880	+	TSC_hg19_v1_chr11_+_9685669 AB014540 BC000134 CU674300 AF210818 AK304104	-93724	+	BC000616 TSC_hg19_v1_chr11_+_9685651 AF134894	-93779	+	TSC_hg19_v1_chr11_+_9685627 NM_015055	-93794	+	AK098060 TSC_hg19_v1_chr11_+_9779882	432	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	536336	-	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	547199	+	AB014540|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000134|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF210818|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AK304104|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000616|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF134894|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##NM_015055|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AK098060|LOC283104|283104|uncharacterized LOC283104##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin	0.0	
chr13	47536842	47536945	reg1031468.p1	3.880	+	AK314132 BX647777 AK302787 NM_000621 NM_001165947	-65826	-	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	-165578	-	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-409386	+	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1038558	-	AK001818 NM_018283 BC133015 BC133017 BC107875 TSC_hg19_v1_chr13_+_48611855 BC050698 BC064607	1074921	+	TSC_hg19_v1_chr13_-_48612129 AK316271	1075215	-	AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001818|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##NM_018283|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133015|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC133017|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC107875|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC050698|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##BC064607|NUDT15|55270|nudix (nucleoside diphosphate linked moiety X)-type motif 15##AK316271|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.718472	CTCF.p2:-9:0.718
chr15	73344281	73344379	reg1039443.p2	3.880	+	TSC_hg19_v1_chr15_-_73076118 AK055526 NM_031284	-268207	-	BC044589 TSC_hg19_v1_chr15_-_73076072	-268259	-	TSC_hg19_v1_chr15_-_73076063 BC006112	-268265	-	NM_001172623 NM_001172624 NM_002499 U61262 U72391 BC117161 BC143270 BC143271 BC143279 AB528479	590	+	TSC_hg19_v1_chr15_-_73661207 AJ132429 DQ854814	316877	-	AJ238850 NM_005477	317274	-	AK055526|ADPGK|83440|ADP-dependent glucokinase##NM_031284|ADPGK|83440|ADP-dependent glucokinase##BC044589|ADPGK|83440|ADP-dependent glucokinase##BC006112|ADPGK|83440|ADP-dependent glucokinase##NM_001172623|NEO1|4756|neogenin 1##NM_001172624|NEO1|4756|neogenin 1##NM_002499|NEO1|4756|neogenin 1##U61262|NEO1|4756|neogenin 1##U72391|NEO1|4756|neogenin 1##BC117161|NEO1|4756|neogenin 1##BC143270|NEO1|4756|neogenin 1##BC143271|NEO1|4756|neogenin 1##BC143279|NEO1|4756|neogenin 1##AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4	0.0	
chr2	198174673	198174760	reg1022214.p2	3.880	+	AB128038 AB527353 TSC_hg19_v1_chr2_-_197791382 BX648642 AK022439 NM_024989 BC040517	-383272	-	BC137150 BC137151 AY358249 NM_213608	-499779	-	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	-510303	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	666	-	TSC_hg19_v1_chr2_-_198175459 BC063622	757	-	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	803	-	AB128038|PGAP1|80055|post-GPI attachment to proteins 1##BX648642|PGAP1|80055|post-GPI attachment to proteins 1##AK022439|PGAP1|80055|post-GPI attachment to proteins 1##NM_024989|PGAP1|80055|post-GPI attachment to proteins 1##BC040517|PGAP1|80055|post-GPI attachment to proteins 1##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK124039|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44	0.0	
chr2	214030929	214031031	reg1034517.p2	3.880	+	BC028936 NM_001079526	-14648	-	AK301503 AF130863 NM_016260	-15925	-	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	-627665	-	AK124960 NM_001242575	117948	-	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	118177	+	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	1245480	+	BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451##BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	0.0	
chr22	32560597	32560680	reg1042742.p2	3.880	+	BC139845 CU012997 CU013285 AB527618 CR456485 NM_001010859 BC040263	-5384	-	TSC_hg19_v1_chr22_+_32439250 M24847 BC139838 BC139839 CU013176 CU013464 AB463272	-121380	+	TSC_hg19_v1_chr22_+_32439229 CR456579	-121415	+	BC069827 BC069737 AJ010231 NM_006605	28787	-	CR456563 NM_001159546	37878	-	AK055999 NM_001098527	38825	-	BC139845|C22orf42|150297|chromosome 22 open reading frame 42##CR456485|C22orf42|150297|chromosome 22 open reading frame 42##NM_001010859|C22orf42|150297|chromosome 22 open reading frame 42##BC040263|C22orf42|150297|chromosome 22 open reading frame 42##M24847|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139838|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139839|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CU013176|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CU013464|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CR456579|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC069827|RFPL2|10739|ret finger protein-like 2##BC069737|RFPL2|10739|ret finger protein-like 2##AJ010231|RFPL2|10739|ret finger protein-like 2##NM_006605|RFPL2|10739|ret finger protein-like 2##CR456563|RFPL2|10739|ret finger protein-like 2##NM_001159546|RFPL2|10739|ret finger protein-like 2##AK055999|RFPL2|10739|ret finger protein-like 2##NM_001098527|RFPL2|10739|ret finger protein-like 2	0.0	
chr2	96819763	96819884	reg1028382.p1	3.880	+	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	-8664	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	-8869	-	BC107126 AJ537600 BC107127 NM_001002036	-15650	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	54232	-	TSC_hg19_v1_chr2_+_96874144 AK311432	54331	+	AF270647 TSC_hg19_v1_chr2_-_96874561 BC012774 BC014076 BC012793 BC007894 BC009998 BC032106 BC014274 BC003028 BC008894 BC013279	54711	-	BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AF270647|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012774|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014076|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC012793|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC007894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC009998|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC032106|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC014274|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC003028|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC008894|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##BC013279|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.192911	
chr9	75682117	75682266	reg1034637.p1	3.880	+	NM_000689	-113959	-	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	-114246	-	AF417578 NM_138691	-545475	+	TSC_hg19_v1_chr9_+_75766780 AK296808 AK311684 BC035993 NM_000700 X05908	84587	+	TSC_hg19_v1_chr9_+_75766797 BC001275	84612	+	NM_006914 BC051830 Y08639	1430083	+	NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AK296808|ANXA1|301|annexin A1##BC035993|ANXA1|301|annexin A1##NM_000700|ANXA1|301|annexin A1##X05908|ANXA1|301|annexin A1##BC001275|ANXA1|301|annexin A1##NM_006914|RORB|6096|RAR-related orphan receptor B##BC051830|RORB|6096|RAR-related orphan receptor B##Y08639|RORB|6096|RAR-related orphan receptor B	0.807485	CTCF.p2:-5:0.807
chr12	52446368	52446453	reg1035773.p1	3.879	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	-1194	+	AK297526 NM_001202233	-29795	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	-45669	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	17344	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	17388	+	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	139334	-	NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80	0.0	
chr14	74237372	74237511	reg1031684.p1	3.879	+	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	-10476	-	BC015668 TSC_hg19_v1_chr14_-_74226640	-10803	-	CR457112 BC039577 AK290980 TSC_hg19_v1_chr14_-_74181085 AF320308 BC007712 NM_006029	-56680	-	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	16478	-	TSC_hg19_v1_chr14_+_74318554 NM_001146154 NM_001146155 AY346133 AY424308 AK311280 NM_152444 BX641118 BC059364 AK309188 AK096410 BC034973	81148	+	NM_001242924 NM_001242926 NM_001242927 NM_001242928 NM_021188 AK299138	115877	+	AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##BC015668|C14orf43|91748|chromosome 14 open reading frame 43##CR457112|PNMA1|9240|paraneoplastic antigen MA1##BC039577|PNMA1|9240|paraneoplastic antigen MA1##AK290980|PNMA1|9240|paraneoplastic antigen MA1##AF320308|PNMA1|9240|paraneoplastic antigen MA1##BC007712|PNMA1|9240|paraneoplastic antigen MA1##NM_006029|PNMA1|9240|paraneoplastic antigen MA1##NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43##NM_001146154|PTGR2|145482|prostaglandin reductase 2##NM_001146155|PTGR2|145482|prostaglandin reductase 2##AY346133|PTGR2|145482|prostaglandin reductase 2##AY424308|PTGR2|145482|prostaglandin reductase 2##AK311280|PTGR2|145482|prostaglandin reductase 2##NM_152444|PTGR2|145482|prostaglandin reductase 2##BX641118|PTGR2|145482|prostaglandin reductase 2##BC059364|PTGR2|145482|prostaglandin reductase 2##AK309188|PTGR2|145482|prostaglandin reductase 2##AK096410|PTGR2|145482|prostaglandin reductase 2##NM_001242924|ZNF410|57862|zinc finger protein 410##NM_001242926|ZNF410|57862|zinc finger protein 410##NM_001242927|ZNF410|57862|zinc finger protein 410##NM_001242928|ZNF410|57862|zinc finger protein 410##NM_021188|ZNF410|57862|zinc finger protein 410##AK299138|ZNF410|57862|zinc finger protein 410	0.0	
chr16	11211553	11211726	reg1031511.p1	3.879	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-173196	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-175404	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-175473	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	138411	-	X63758 BC096135 BC096136 BC096137 NM_005425	151499	-	NM_021247	155812	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr17	50248451	50248597	reg1040993.p1	3.879	+	BC029865 TSC_hg19_v1_chr17_-_50237384 AF288385 NM_001082534	-11161	-	NM_001082533	-11364	-	AB036836 TSC_hg19_v1_chr17_-_50236965	-11560	-	NM_001243552	814355	+	NM_032559 AK057272 AF333335 BC033802 AK302262 AK308265 CU689754	1651791	+	TSC_hg19_v1_chr17_+_52978217 NM_005486 AK001893 AK309164 AK225351 AJ010071 AK303912 AK300823 AK303913 AK315039 AK315907 AK223125 BC029396 AB590855	2729632	+	BC029865|CA10|56934|carbonic anhydrase X##AF288385|CA10|56934|carbonic anhydrase X##NM_001082534|CA10|56934|carbonic anhydrase X##NM_001082533|CA10|56934|carbonic anhydrase X##AB036836|CA10|56934|carbonic anhydrase X##NM_001243552|LOC100506650|100506650|uncharacterized LOC100506650##NM_032559|KIF2B|84643|kinesin family member 2B##AK057272|KIF2B|84643|kinesin family member 2B##AF333335|KIF2B|84643|kinesin family member 2B##BC033802|KIF2B|84643|kinesin family member 2B##AK302262|KIF2B|84643|kinesin family member 2B##NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1##AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1##AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1##AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1##AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1##AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1##AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1##BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1	0.154345	
chr20	6159324	6159427	reg1026040.p1	3.879	+	TSC_hg19_v1_chr20_-_6104078 AB105105 NM_017671	-55212	-	BC035882 TSC_hg19_v1_chr20_-_6103891	-55498	-	TSC_hg19_v1_chr20_-_6103678 AK314394 BC040545 AF443278	-55701	-	BC069214 NM_001200	589369	+	AB024079 HQ258212 AF244134 AF231916 NM_017545 AK308963 BC113665 BC113667 TSC_hg19_v1_chr20_-_7921106 AK313839 AL121739 AK289423	1761727	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	1840925	-	AB105105|FERMT1|55612|fermitin family member 1##NM_017671|FERMT1|55612|fermitin family member 1##BC035882|FERMT1|55612|fermitin family member 1##AK314394|FERMT1|55612|fermitin family member 1##BC040545|FERMT1|55612|fermitin family member 1##AF443278|FERMT1|55612|fermitin family member 1##BC069214|BMP2|650|bone morphogenetic protein 2##NM_001200|BMP2|650|bone morphogenetic protein 2##AB024079|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##HQ258212|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF244134|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AF231916|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##NM_017545|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK308963|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113665|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC113667|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK313839|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AL121739|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##AK289423|HAO1|54363|hydroxyacid oxidase (glycolate oxidase) 1##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4	0.989813	CTCF.p2:-2:0.990
chr2	1901046	1901141	reg1029976.p1	3.879	+	TSC_hg19_v1_chr2_-_1748320 BC030834	-152771	-	TSC_hg19_v1_chr2_-_1748288 NM_012293	-152800	-	TSC_hg19_v1_chr2_-_1748282 AF200348 D86983 EF090903	-152832	-	AL133024 TSC_hg19_v1_chr2_-_1926602	25458	-	BC031690 TSC_hg19_v1_chr2_-_1946938	45813	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	433872	-	BC030834|PXDN|7837|peroxidasin homolog (Drosophila)##NM_012293|PXDN|7837|peroxidasin homolog (Drosophila)##AF200348|PXDN|7837|peroxidasin homolog (Drosophila)##D86983|PXDN|7837|peroxidasin homolog (Drosophila)##EF090903|PXDN|7837|peroxidasin homolog (Drosophila)##AL133024|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like	0.992602	CTCF.p2:-4:0.993
chr2	84723003	84723183	reg1001259.p2	3.879	+	NM_003849	-36508	-	AK296741 TSC_hg19_v1_chr2_-_84686396	-36698	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	-36723	-	TSC_hg19_v1_chr2_+_84743576 AK094676 NM_001370	20484	+	TSC_hg19_v1_chr2_-_85108209 AK296608 AK309615	385114	-	TSC_hg19_v1_chr2_-_85108241 NM_001080824 BC051789	385210	-	NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK094676|DNAH6|1768|dynein, axonemal, heavy chain 6##NM_001370|DNAH6|1768|dynein, axonemal, heavy chain 6##AK296608|C2orf89|129293|chromosome 2 open reading frame 89##AK309615|C2orf89|129293|chromosome 2 open reading frame 89##NM_001080824|C2orf89|129293|chromosome 2 open reading frame 89##BC051789|C2orf89|129293|chromosome 2 open reading frame 89	0.0	
chr3	189814424	189814595	reg1034367.p2	3.879	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	-306991	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-465250	+	AK125682 NM_198485 BC101550 BC101552	-924698	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	24186	-	NM_018192	24398	-	NM_001134418	25716	-	AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##NM_001134418|LEPREL1|55214|leprecan-like 1	0.0	
chr4	29256	29384	reg1029294.p1	3.879	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr4_+_53214 AK300505 AK311343 BC036110 BC043151 AK301848 AK309855 AK056302 BC020836 BC009008 BX537887 NM_182524	23904	+	TSC_hg19_v1_chr4_+_124389 AK096662 AL833758 BC104026 BC104028	95054	+	AK302099 NM_001137608	260623	-	AK300505|ZNF595|152687|zinc finger protein 595##BC036110|ZNF595|152687|zinc finger protein 595##BC043151|ZNF595|152687|zinc finger protein 595##AK301848|ZNF595|152687|zinc finger protein 595##AK309855|ZNF595|152687|zinc finger protein 595##AK056302|ZNF595|152687|zinc finger protein 595##BC020836|ZNF718|255403|zinc finger protein 718##BX537887|ZNF595|152687|zinc finger protein 595##NM_182524|ZNF595|152687|zinc finger protein 595##AK096662|ZNF718|255403|zinc finger protein 718##AL833758|ZNF718|255403|zinc finger protein 718##BC104026|ZNF718|255403|zinc finger protein 718##BC104028|ZNF718|255403|zinc finger protein 718##AK302099|ZNF732|654254|zinc finger protein 732##NM_001137608|ZNF732|654254|zinc finger protein 732	0.980068	CTCF.p2:-32:0.980
chr7	29385380	29385461	reg1036060.p2	3.879	+	U28926 AK313021 TSC_hg19_v1_chr7_+_29234428 BC112155 AK293959 AB529082 EU732759 EU732760 EU732761 EU732762 EU732763 EU732764 EU732765 EU732766	-150979	+	TSC_hg19_v1_chr7_+_29234115 NM_004067	-151297	+	AF106704 TSC_hg19_v1_chr7_-_29186093 AF282617 AK225545 BC016838 AK075433 NM_019029 NM_031311	-199307	-	NM_001039936	134065	+	TSC_hg19_v1_chr7_+_29603450 BC029131 NM_175887	217999	+	TSC_hg19_v1_chr7_+_29603500 BC018144	218111	+	U28926|CHN2|1124|chimerin (chimaerin) 2##AK313021|CHN2|1124|chimerin (chimaerin) 2##BC112155|CHN2|1124|chimerin (chimaerin) 2##AK293959|CHN2|1124|chimerin (chimaerin) 2##EU732759|CHN2|1124|chimerin (chimaerin) 2##EU732760|CHN2|1124|chimerin (chimaerin) 2##EU732761|CHN2|1124|chimerin (chimaerin) 2##EU732762|CHN2|1124|chimerin (chimaerin) 2##EU732763|CHN2|1124|chimerin (chimaerin) 2##EU732764|CHN2|1124|chimerin (chimaerin) 2##EU732765|CHN2|1124|chimerin (chimaerin) 2##EU732766|CHN2|1124|chimerin (chimaerin) 2##NM_004067|CHN2|1124|chimerin (chimaerin) 2##AF106704|CPVL|54504|carboxypeptidase, vitellogenic-like##AF282617|CPVL|54504|carboxypeptidase, vitellogenic-like##AK225545|CPVL|54504|carboxypeptidase, vitellogenic-like##BC016838|CPVL|54504|carboxypeptidase, vitellogenic-like##AK075433|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_019029|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_031311|CPVL|54504|carboxypeptidase, vitellogenic-like##NM_001039936|CHN2|1124|chimerin (chimaerin) 2##BC029131|PRR15|222171|proline rich 15##NM_175887|PRR15|222171|proline rich 15##BC018144|PRR15|222171|proline rich 15	0.996787	CTCF.p2:1:0.997
chr1	171214855	171214967	reg1011283.p2	3.878	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	-60489	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	-154870	+	NM_001163629 NM_025063 AK027203 BC113390 BC113392	-310264	+	AK290113 AK315100 M64082 NM_002021 AK296198	2750	+	BC002780 NM_002022 Z11737	68517	+	TSC_hg19_v1_chr1_+_171454689 BC066968 NM_015172 BC058930 BC026108 BC045713 BC001260 BC006090	239783	+	NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##NM_001163629|C1orf129|80133|chromosome 1 open reading frame 129##NM_025063|C1orf129|80133|chromosome 1 open reading frame 129##AK027203|C1orf129|80133|chromosome 1 open reading frame 129##BC113390|C1orf129|80133|chromosome 1 open reading frame 129##BC113392|C1orf129|80133|chromosome 1 open reading frame 129##AK290113|FMO1|2326|flavin containing monooxygenase 1##AK315100|FMO1|2326|flavin containing monooxygenase 1##M64082|FMO1|2326|flavin containing monooxygenase 1##NM_002021|FMO1|2326|flavin containing monooxygenase 1##AK296198|FMO1|2326|flavin containing monooxygenase 1##BC002780|FMO4|2329|flavin containing monooxygenase 4##NM_002022|FMO4|2329|flavin containing monooxygenase 4##Z11737|FMO4|2329|flavin containing monooxygenase 4##BC066968|PRRC2C|23215|proline-rich coiled-coil 2C##NM_015172|PRRC2C|23215|proline-rich coiled-coil 2C##BC058930|PRRC2C|23215|proline-rich coiled-coil 2C##BC026108|PRRC2C|23215|proline-rich coiled-coil 2C##BC045713|PRRC2C|23215|proline-rich coiled-coil 2C##BC001260|PRRC2C|23215|proline-rich coiled-coil 2C##BC006090|PRRC2C|23215|proline-rich coiled-coil 2C	0.0	
chr12	22934416	22934526	reg1034029.p2	3.878	+	TSC_hg19_v1_chr12_+_22778130 CU688188 BC006111 AL137750 AK074425	-156324	+	AF207600 TSC_hg19_v1_chr12_+_22778077 BC066907 NM_001039481 NM_018638	-156428	+	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	-237005	-	NM_178010 AK098610 AK223536	803055	-	AK074317 TSC_hg19_v1_chr12_-_24102605 BC065532 AB081589 NM_006940	1168131	-	TSC_hg19_v1_chr12_-_24103855 AK299607 AK096569	1169383	-	BC006111|ETNK1|55500|ethanolamine kinase 1##AL137750|ETNK1|55500|ethanolamine kinase 1##AK074425|ETNK1|55500|ethanolamine kinase 1##AF207600|ETNK1|55500|ethanolamine kinase 1##BC066907|ETNK1|55500|ethanolamine kinase 1##NM_001039481|ETNK1|55500|ethanolamine kinase 1##NM_018638|ETNK1|55500|ethanolamine kinase 1##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528##NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5##AK098610|SOX5|6660|SRY (sex determining region Y)-box 5##AK223536|SOX5|6660|SRY (sex determining region Y)-box 5##AK074317|SOX5|6660|SRY (sex determining region Y)-box 5##BC065532|SOX5|6660|SRY (sex determining region Y)-box 5##AB081589|SOX5|6660|SRY (sex determining region Y)-box 5##NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5##AK299607|SOX5|6660|SRY (sex determining region Y)-box 5##AK096569|SOX5|6660|SRY (sex determining region Y)-box 5	0.978755	CTCF.p2:-1:0.979
chr12	69979276	69979436	reg1035651.p1	3.878	+	AF026293 TSC_hg19_v1_chr12_+_69979275	-79	+	TSC_hg19_v1_chr12_+_69979238 NM_006431 AK290767 BC113514 BC113516 AK297685 AF026166	-132	+	TSC_hg19_v1_chr12_+_69864170 NM_001042555 NM_006654 BC021562 AK312477	-115214	+	AK294307 AK316408 NM_001198842 AK316397 AK302157	193	+	BC090881 NM_201550	25585	-	NM_152439 BC028087	103699	-	AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##NM_001042555|FRS2|10818|fibroblast growth factor receptor substrate 2##NM_006654|FRS2|10818|fibroblast growth factor receptor substrate 2##BC021562|FRS2|10818|fibroblast growth factor receptor substrate 2##AK312477|FRS2|10818|fibroblast growth factor receptor substrate 2##AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC090881|LRRC10|376132|leucine rich repeat containing 10##NM_201550|LRRC10|376132|leucine rich repeat containing 10##NM_152439|BEST3|144453|bestrophin 3##BC028087|BEST3|144453|bestrophin 3	0.0	
chr14	76819501	76819598	reg1001885.p2	3.878	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-201243	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-201272	+	TSC_hg19_v1_chr14_+_76618258 NM_017926 NM_017972 BC058032	-201293	+	NM_004452	18140	+	TSC_hg19_v1_chr14_+_77227817 AK094330	408251	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	408906	+	AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_017926|C14orf118|55668|chromosome 14 open reading frame 118##NM_017972|C14orf118|55668|chromosome 14 open reading frame 118##BC058032|C14orf118|55668|chromosome 14 open reading frame 118##NM_004452|ESRRB|2103|estrogen-related receptor beta##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1	0.0	
chr15	54270589	54270770	reg1032014.p2	3.878	+	AK096055 BX537884 NM_182758	-218832	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-1188485	-	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	-1299798	-	NM_001080534	34421	+	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	1218413	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	1218500	-	AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1	0.0	
chr16	49626815	49626881	reg1004624.p1	3.878	+	BC021181 BC021718 NM_144602 CU676858	-219020	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-311114	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	-311348	-	NM_015069	234069	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	432292	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	473045	+	BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##NM_015069|ZNF423|23090|zinc finger protein 423##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3	0.0	
chr18	73964988	73965101	reg1039447.p1	3.878	+	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-825422	-	TSC_hg19_v1_chr18_+_72998258 AK223545 BC024152	-966702	+	TSC_hg19_v1_chr18_+_72922751 NM_005786 AK091155 AX746813	-1042299	+	BC108287 TSC_hg19_v1_chr18_-_74092260	127206	-	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	242111	-	TSC_hg19_v1_chr18_-_74534239 BC032908	569195	-	BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1##BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1##NM_005786|TSHZ1|10194|teashirt zinc finger homeobox 1##BC108287|ZNF516|9658|zinc finger protein 516##D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC032908|LOC100131655|100131655|uncharacterized LOC100131655	0.0	
chr22	38494109	38494211	reg1037760.p1	3.878	+	AF132610 NM_013356	-15002	-	TSC_hg19_v1_chr22_+_38453478 CR456550	-40649	+	AK092818 AX747747 NM_001039583 NM_001039584 NM_012407 AK308792 TSC_hg19_v1_chr22_+_38453410 AK299684 AK310629 AK000875 AK222640 AL049654 BC017561 AB026491	-40801	+	CU677367 TSC_hg19_v1_chr22_-_38506639 AK026235 BC015619	12442	-	TSC_hg19_v1_chr22_-_38506676 AY358164 NM_025045	12517	-	CR456543 TSC_hg19_v1_chr22_-_38577838 AK291212 BC036742 AL080187 NM_001004426 NM_003560 AF064594 AK308308 BC051904 AK096521 AK290825 NM_001199562 AK300459	83633	-	AF132610|SLC16A8|23539|solute carrier family 16, member 8 (monocarboxylic acid transporter 3)##NM_013356|SLC16A8|23539|solute carrier family 16, member 8 (monocarboxylic acid transporter 3)##CR456550|PICK1|9463|protein interacting with PRKCA 1##AK092818|PICK1|9463|protein interacting with PRKCA 1##NM_001039583|PICK1|9463|protein interacting with PRKCA 1##NM_001039584|PICK1|9463|protein interacting with PRKCA 1##NM_012407|PICK1|9463|protein interacting with PRKCA 1##AK308792|PICK1|9463|protein interacting with PRKCA 1##AK299684|PICK1|9463|protein interacting with PRKCA 1##AK310629|PICK1|9463|protein interacting with PRKCA 1##AK000875|PICK1|9463|protein interacting with PRKCA 1##AK222640|PICK1|9463|protein interacting with PRKCA 1##AL049654|PICK1|9463|protein interacting with PRKCA 1##BC017561|PICK1|9463|protein interacting with PRKCA 1##AB026491|PICK1|9463|protein interacting with PRKCA 1##AK026235|BAIAP2L2|80115|BAI1-associated protein 2-like 2##BC015619|BAIAP2L2|80115|BAI1-associated protein 2-like 2##AY358164|BAIAP2L2|80115|BAI1-associated protein 2-like 2##NM_025045|BAIAP2L2|80115|BAI1-associated protein 2-like 2##CR456543|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK291212|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##BC036742|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AL080187|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001004426|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_003560|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AF064594|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK308308|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##BC051904|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK096521|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK290825|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001199562|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK300459|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)	0.473747	CTCF.p2:-9:0.474
chr2	28256311	28256388	reg1030153.p1	3.878	+	BC014088 TSC_hg19_v1_chr2_-_28113982	-142380	-	TSC_hg19_v1_chr2_+_28113675 L38616 AF420602 AF420603 AF420604 AF420605	-142681	+	TSC_hg19_v1_chr2_+_28113621 AF015767	-142717	+	BX647822 TSC_hg19_v1_chr2_+_28615691	359331	+	TSC_hg19_v1_chr2_+_28615724 AK055579	359361	+	TSC_hg19_v1_chr2_+_28615779 NM_005253	359433	+	BC014088|LOC100302650|100302650|uncharacterized LOC100302650##L38616|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF420602|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF420603|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF420604|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF420605|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##AF015767|BRE|9577|brain and reproductive organ-expressed (TNFRSF1A modulator)##BX647822|FOSL2|2355|FOS-like antigen 2##AK055579|FOSL2|2355|FOS-like antigen 2##NM_005253|FOSL2|2355|FOS-like antigen 2	0.0	
chr5	116283496	116283651	reg1002075.p1	3.878	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-373059	-	TSC_hg19_v1_chr5_+_115898220 D28352	-385349	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-862852	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2040665	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2123238	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2123592	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr12	132072934	132073115	reg1023670.p1	3.877	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-634571	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-716313	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-716399	+	TSC_hg19_v1_chr12_+_132195623 BC142980	122589	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	122632	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	239942	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.0	
chr17	25798822	25799002	reg1031879.p2	3.877	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-177631	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-177790	+	NM_001190452	-3776476	+	BC035488 BC042106 NM_014238	117	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	159256	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	159291	+	AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.0	
chr17	45867541	45867641	reg1033690.p2	3.877	+	AF093098 NM_013351 AK223634 BC039739 AF241243 AB590854 TSC_hg19_v1_chr17_+_45810959	-56807	+	TSC_hg19_v1_chr17_+_45773425 AB383985	-94142	+	TSC_hg19_v1_chr17_+_45773067 BC111418	-94552	+	BC065482 TSC_hg19_v1_chr17_-_45899130	31533	-	TSC_hg19_v1_chr17_-_45899154 AF323729 AK000267 BC028010 NM_145798 AK289523 AF392446	31594	-	CU677497 CU690922 DQ891139 DQ894318 BC015904 TSC_hg19_v1_chr17_-_45908897 BC039852 AK293624 BC052601 NM_145255 NM_148887	41302	-	AF093098|TBX21|30009|T-box 21##NM_013351|TBX21|30009|T-box 21##AK223634|TBX21|30009|T-box 21##BC039739|TBX21|30009|T-box 21##AF241243|TBX21|30009|T-box 21##BC111418|TBKBP1|9755|TBK1 binding protein 1##BC065482|OSBPL7|114881|oxysterol binding protein-like 7##AF323729|OSBPL7|114881|oxysterol binding protein-like 7##BC028010|OSBPL7|114881|oxysterol binding protein-like 7##NM_145798|OSBPL7|114881|oxysterol binding protein-like 7##AK289523|OSBPL7|114881|oxysterol binding protein-like 7##AF392446|OSBPL7|114881|oxysterol binding protein-like 7##DQ891139|MRPL10|124995|mitochondrial ribosomal protein L10##DQ894318|MRPL10|124995|mitochondrial ribosomal protein L10##BC015904|MRPL10|124995|mitochondrial ribosomal protein L10##BC039852|MRPL10|124995|mitochondrial ribosomal protein L10##AK293624|MRPL10|124995|mitochondrial ribosomal protein L10##BC052601|MRPL10|124995|mitochondrial ribosomal protein L10##NM_145255|MRPL10|124995|mitochondrial ribosomal protein L10##NM_148887|MRPL10|124995|mitochondrial ribosomal protein L10	0.0	
chr18	34409149	34409235	reg1033205.p1	3.877	+	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-72	-	TSC_hg19_v1_chr18_+_34409093 AK304230 AL832625 NM_020776 BC038772 AK292288 BX648875 BC045585 AB587550 AM393103 AM393380 BC146691	-109	+	AB073382 TSC_hg19_v1_chr18_-_34408948	-240	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	736504	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	736807	-	TSC_hg19_v1_chr18_-_36915657 D28405	2506464	-	BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK304230|KIAA1328|57536|KIAA1328##AL832625|KIAA1328|57536|KIAA1328##NM_020776|KIAA1328|57536|KIAA1328##AK292288|KIAA1328|57536|KIAA1328##BX648875|KIAA1328|57536|KIAA1328##BC045585|KIAA1328|57536|KIAA1328##AM393103|KIAA1328|57536|KIAA1328##AM393380|KIAA1328|57536|KIAA1328##BC146691|KIAA1328|57536|KIAA1328##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4	0.036416	
chr18	42936051	42936207	reg1030531.p1	3.877	+	NM_001242692 AK292422	-143177	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-675261	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-676015	+	AF349446 NM_007163	258636	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	367975	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	368028	+	NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.909682	CTCF.p2:-10:0.910
chr19	14474704	14474867	reg1036454.p2	3.877	+	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	-157737	-	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	-213985	-	TSC_hg19_v1_chr19_+_14247979 BX537706	-226794	+	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	17264	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	17470	+	TSC_hg19_v1_chr19_-_14529877 AK301847	55104	-	AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule##AK301847|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A	0.0	
chr21	15916496	15916676	reg1032459.p2	3.877	+	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-161113	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-328089	+	AB463838 AY197607 NM_198996	-337338	-	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	2063	-	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	520631	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	1185739	+	AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AY197607|LIPI|149998|lipase, member I##NM_198996|LIPI|149998|lipase, member I##BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25	0.0	
chr5	112299578	112299749	reg1014648.p1	3.877	+	CU688102 AY562243 BC065926 TSC_hg19_v1_chr5_-_112257925 BC000232 M74090 AK295436 AK298268 AK299902 AK300048 AK312522 M73547 AX775929 BX648005 NM_005669	-41676	-	TSC_hg19_v1_chr5_+_112196983 AK311803 BC000186 X12791 AK313576 BC017830 BC010947 BC018669 AB587423	-102639	+	NM_001204193 NM_001204194 NM_001204196 NM_001204199 NM_003135 TSC_hg19_v1_chr5_+_112196975	-102734	+	TSC_hg19_v1_chr5_+_112312407 NM_001242377 NM_152624	12742	+	TSC_hg19_v1_chr5_+_112312506 AY135173 AY146650 BC017965 AK296361 AK090564 AX746512 BC064593 BC068042 CU687920	12865	+	M62397 AK096212 TSC_hg19_v1_chr5_-_112630346	330662	-	AY562243|REEP5|7905|receptor accessory protein 5##BC065926|REEP5|7905|receptor accessory protein 5##BC000232|REEP5|7905|receptor accessory protein 5##M74090|REEP5|7905|receptor accessory protein 5##AK295436|REEP5|7905|receptor accessory protein 5##AK298268|REEP5|7905|receptor accessory protein 5##AK299902|REEP5|7905|receptor accessory protein 5##AK312522|REEP5|7905|receptor accessory protein 5##BX648005|REEP5|7905|receptor accessory protein 5##NM_005669|REEP5|7905|receptor accessory protein 5##AK311803|SRP19|6728|signal recognition particle 19kDa##BC000186|SRP19|6728|signal recognition particle 19kDa##X12791|SRP19|6728|signal recognition particle 19kDa##BC017830|SRP19|6728|signal recognition particle 19kDa##BC010947|SRP19|6728|signal recognition particle 19kDa##BC018669|SRP19|6728|signal recognition particle 19kDa##NM_001204193|SRP19|6728|signal recognition particle 19kDa##NM_001204194|SRP19|6728|signal recognition particle 19kDa##NM_001204196|SRP19|6728|signal recognition particle 19kDa##NM_001204199|SRP19|6728|signal recognition particle 19kDa##NM_003135|SRP19|6728|signal recognition particle 19kDa##NM_001242377|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##NM_152624|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY135173|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AY146650|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC017965|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK296361|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##AK090564|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC064593|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##BC068042|DCP2|167227|DCP2 decapping enzyme homolog (S. cerevisiae)##M62397|MCC|4163|mutated in colorectal cancers##AK096212|MCC|4163|mutated in colorectal cancers	0.0	
chr5	115403703	115403818	reg1006758.p1	3.877	+	NM_001195581	-16598	+	AK291655 BC068560 NM_173800 BC060869 AY560010 BC109022 BC109023	-105549	+	TSC_hg19_v1_chr5_+_115177642 NM_001284 BX647735 U91932 BC000804 D63643 BC012614 X99458 DQ891198 DQ894381 AK311843 BT009833 CR450341	-226085	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	16961	+	TSC_hg19_v1_chr5_+_115898220 D28352	494464	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	506754	-	NM_001195581|LOC644100|644100|uncharacterized LOC644100##AK291655|AQPEP|206338|laeverin##BC068560|AQPEP|206338|laeverin##NM_173800|AQPEP|206338|laeverin##BC060869|AQPEP|206338|laeverin##AY560010|AQPEP|206338|laeverin##BC109022|AQPEP|206338|laeverin##BC109023|AQPEP|206338|laeverin##NM_001284|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BX647735|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##U91932|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC000804|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##D63643|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BC012614|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##X99458|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ891198|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##DQ894381|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##AK311843|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##BT009833|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##CR450341|AP3S1|1176|adaptor-related protein complex 3, sigma 1 subunit##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	0.0	
chr5	56795213	56795348	reg1013624.p1	3.877	+	BC137470 BC137473 BX648504 NM_001017992	-16686	-	NM_001127236 AL136844 AB463051 AM392551 AM393442	-285352	+	BC113004 NM_001127235	-324007	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	960656	-	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	992014	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	1083639	+	BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family	0.0	
chr5	96258604	96258742	reg1037125.p2	3.877	+	TSC_hg19_v1_chr5_+_96212203 AK312864 AB109031 AB163917 BC065240	-46485	+	NM_001130140 NM_022350 AK074281	-47007	+	AK310535 BC030775 NM_001198541	-108848	-	TSC_hg19_v1_chr5_+_96271097 AK096804	12420	+	NM_005575 D50810	12693	+	TSC_hg19_v1_chr5_+_96271783 U62768 AK314226 BC111718 BC113117 BC028692	13121	+	AK312864|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AB109031|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AB163917|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##BC065240|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##NM_001130140|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##NM_022350|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AK074281|ERAP2|64167|endoplasmic reticulum aminopeptidase 2##AK310535|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##BC030775|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##NM_001198541|ERAP1|51752|endoplasmic reticulum aminopeptidase 1##AK096804|LNPEP|4012|leucyl/cystinyl aminopeptidase##NM_005575|LNPEP|4012|leucyl/cystinyl aminopeptidase##D50810|LNPEP|4012|leucyl/cystinyl aminopeptidase##U62768|LNPEP|4012|leucyl/cystinyl aminopeptidase##AK314226|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC111718|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC113117|LNPEP|4012|leucyl/cystinyl aminopeptidase##BC028692|LNPEP|4012|leucyl/cystinyl aminopeptidase	0.0	
chr6	115069343	115069523	reg1007505.p2	3.877	+	AF503292 NM_153612 BC093911 BC093913	-685409	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-777097	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	-777161	-	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	1312449	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	1352576	+	AK097758 TSC_hg19_v1_chr6_-_116422450	1352997	-	AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	0.0	
chr6	6677463	6677607	reg1000621.p2	3.877	+	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	-88585	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-356625	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-356650	-	BC039678 TSC_hg19_v1_chr6_+_6725205	47626	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	430291	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	430500	+	NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1	0.059635	
chr7	111284769	111284884	reg1035607.p1	3.877	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	-82342	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-553703	+	NM_001024607	-2760190	-	TSC_hg19_v1_chr7_-_111428948 AK294820	144185	-	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	561439	-	TSC_hg19_v1_chr7_-_111846458 AK095906 AK309605 NM_014705	561636	-	AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AK294820|DOCK4|9732|dedicator of cytokinesis 4##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4##AK095906|DOCK4|9732|dedicator of cytokinesis 4##AK309605|DOCK4|9732|dedicator of cytokinesis 4##NM_014705|DOCK4|9732|dedicator of cytokinesis 4	0.830068	CTCF.p2:-8:0.830
chr9	101763054	101763180	reg1002105.p2	3.877	+	TSC_hg19_v1_chr9_+_101706027 AK308438 NM_001855 AK095885 L25286 D21230	-57134	+	TSC_hg19_v1_chr9_+_101569953 AB527376 AB040673 AB078146 AJ132365 NM_024642	-193127	+	CR749467 TSC_hg19_v1_chr9_-_101558801 NM_173551	-204466	-	TSC_hg19_v1_chr9_+_101867370 AK302059	104254	+	BC071181 TSC_hg19_v1_chr9_+_101867394	104276	+	TSC_hg19_v1_chr9_+_101867401 AJ619019 L11695 NM_001130916 NM_004612	104291	+	AK308438|COL15A1|1306|collagen, type XV, alpha 1##NM_001855|COL15A1|1306|collagen, type XV, alpha 1##AK095885|COL15A1|1306|collagen, type XV, alpha 1##L25286|COL15A1|1306|collagen, type XV, alpha 1##D21230|COL15A1|1306|collagen, type XV, alpha 1##AB040673|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AB078146|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AJ132365|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##NM_024642|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##CR749467|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##NM_173551|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##AK302059|TGFBR1|7046|transforming growth factor, beta receptor 1##BC071181|TGFBR1|7046|transforming growth factor, beta receptor 1##AJ619019|TGFBR1|7046|transforming growth factor, beta receptor 1##L11695|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_001130916|TGFBR1|7046|transforming growth factor, beta receptor 1##NM_004612|TGFBR1|7046|transforming growth factor, beta receptor 1	0.0	
chr9	20684031	20684114	reg1031299.p1	3.877	+	AK056522 AY139834 NM_017794	-25765	+	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	-61576	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	-61624	-	BC114215 TSC_hg19_v1_chr9_-_21031636 BX648779 NM_001010915	347559	-	AB451491 AB451323 AB451452 BC069314 BC096150 BC096151 BC096152 BC096153 V00547 AB587428 V00546 M25460 M28622 NM_002176	393801	-	NM_002177	458071	-	AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC114215|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##BX648779|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##NM_001010915|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##AB451323|IFNB1|3456|interferon, beta 1, fibroblast##AB451452|IFNB1|3456|interferon, beta 1, fibroblast##BC069314|IFNB1|3456|interferon, beta 1, fibroblast##BC096150|IFNB1|3456|interferon, beta 1, fibroblast##BC096151|IFNB1|3456|interferon, beta 1, fibroblast##BC096152|IFNB1|3456|interferon, beta 1, fibroblast##BC096153|IFNB1|3456|interferon, beta 1, fibroblast##V00547|IFNB1|3456|interferon, beta 1, fibroblast##V00546|IFNB1|3456|interferon, beta 1, fibroblast##M25460|IFNB1|3456|interferon, beta 1, fibroblast##M28622|IFNB1|3456|interferon, beta 1, fibroblast##NM_002176|IFNB1|3456|interferon, beta 1, fibroblast##NM_002177|IFNW1|3467|interferon, omega 1	0.0	
chr10	91714814	91714995	reg1021918.p2	3.876	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-216137	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-253529	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-309580	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	902542	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	902829	-	TSC_hg19_v1_chr10_+_92631241 BC006991	916353	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.0	
chr11	131969723	131969832	reg1031335.p1	3.876	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-188438	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-189153	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-729308	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	843237	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	843828	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	1432537	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.0	
chr12	9514518	9514698	reg1029026.p1	3.876	+	TSC_hg19_v1_chr12_+_9436619 AK123583 AK309820	-77983	+	BC111756 AK313639 NM_002864 X54380	-153646	-	TSC_hg19_v1_chr12_-_9268536 NM_000014	-246050	-	TSC_hg19_v1_chr12_-_9600810 BC035635 BC128040 BC111733	86190	-	BC027885 BC113997 BC114516 U11276 NM_002258 AK292022	245888	-	TSC_hg19_v1_chr12_+_9800760 AK096274	286288	+	AK309820|LOC642846|642846|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like##BC111756|PZP|5858|pregnancy-zone protein##AK313639|PZP|5858|pregnancy-zone protein##NM_002864|PZP|5858|pregnancy-zone protein##X54380|PZP|5858|pregnancy-zone protein##NM_000014|A2M|2|alpha-2-macroglobulin##BC035635|DDX12P|440081|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12, pseudogene##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK096274|LOC374443|374443|CLR pseudogene	0.0	
chr1	966773	966953	reg1033686.p2	3.876	+	AF016903 U84406 TSC_hg19_v1_chr1_+_955679	-11218	+	TSC_hg19_v1_chr1_+_955536 AB385240	-11320	+	TSC_hg19_v1_chr1_+_955499 AB191264 NM_198576	-11367	+	TSC_hg19_v1_chr1_+_978666 BC084578	11859	+	TSC_hg19_v1_chr1_+_995079 AK310350	28223	+	TSC_hg19_v1_chr1_+_995109 BC033949	28249	+	AF016903|AGRN|375790|agrin##U84406|AGRN|375790|agrin##AB191264|AGRN|375790|agrin##NM_198576|AGRN|375790|agrin##BC084578|AGRN|375790|agrin##AK310350|LOC100288175|100288175|uncharacterized LOC100288175##BC033949|LOC100288175|100288175|uncharacterized LOC100288175	0.0	
chr22	32033482	32033612	reg1037385.p1	3.876	+	TSC_hg19_v1_chr22_-_32026821 BC001482 NM_014338	-6715	-	BC033613 TSC_hg19_v1_chr22_+_32010180	-23381	+	TSC_hg19_v1_chr22_+_31892521 BC110814 AK292408 BC041101	-141001	+	TSC_hg19_v1_chr22_-_32058202 AB528208 CU013140 CU013428 CR456540 DQ656048	24661	-	NM_173566 TSC_hg19_v1_chr22_-_32146119	112581	-	NM_001242897 TSC_hg19_v1_chr22_+_32149953	116401	+	BC001482|PISD|23761|phosphatidylserine decarboxylase##NM_014338|PISD|23761|phosphatidylserine decarboxylase##BC033613|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC110814|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK292408|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC041101|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##CU013140|PISD|23761|phosphatidylserine decarboxylase##CU013428|PISD|23761|phosphatidylserine decarboxylase##CR456540|PISD|23761|phosphatidylserine decarboxylase##NM_173566|PRR14L|253143|proline rich 14-like##NM_001242897|DEPDC5|9681|DEP domain containing 5	0.0	
chr3	5247232	5247412	reg1033853.p1	3.876	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-17831	+	TSC_hg19_v1_chr3_+_5229430 D86967	-17889	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	-17959	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	1655477	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	1655576	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	3296008	-	DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK124088|LOC100288428|100288428|uncharacterized LOC100288428	0.0	
chr5	11046388	11046490	reg1035603.p2	3.876	+	TSC_hg19_v1_chr5_-_10761361 NM_004394	-285040	-	TSC_hg19_v1_chr5_-_10761341 BC002726	-285097	-	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	-285180	-	U96136 EU328348 TSC_hg19_v1_chr5_-_11904098 AB013805 NM_001332	857597	-	TSC_hg19_v1_chr5_-_11904184 AK296232	857745	-	AX800026 AY045575 NM_001369	2898149	-	NM_004394|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##U96136|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##EU328348|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AB013805|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_001332|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5	0.032859	
chr5	115949726	115949871	reg1026928.p1	3.876	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-39284	-	TSC_hg19_v1_chr5_+_115898220 D28352	-51574	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-529077	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2374440	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2457013	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2457367	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr5	132623452	132623618	reg1004052.p2	3.876	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-190644	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-195132	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-217432	+	TSC_hg19_v1_chr5_-_132948202 AK055684	324664	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	324703	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	680840	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.0	
chr5	133968327	133968447	reg1022839.p1	3.876	+	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	-106582	+	TSC_hg19_v1_chr5_+_133861359 AK056471 BC021962 AK292635 AK074123	-107024	+	TSC_hg19_v1_chr5_+_133842276 BC032795	-126097	+	BC002847 TSC_hg19_v1_chr5_-_133968519 AK223452 AF092130 BC093034 NM_001033503 NM_016103	110	-	TSC_hg19_v1_chr5_+_133984493 AK304060 NM_001252231 NM_021982 BC019341	16044	+	TSC_hg19_v1_chr5_+_134074237 NM_001745 BC130325 AK313156 BC063532 U18242 AB590695 HQ258172 AF068179	105923	+	D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15##AK056471|PHF15|23338|PHD finger protein 15##BC021962|PHF15|23338|PHD finger protein 15##AK292635|PHF15|23338|PHD finger protein 15##AK074123|PHF15|23338|PHD finger protein 15##BC002847|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK223452|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AF092130|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##BC093034|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_001033503|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_016103|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001252231|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001745|CAMLG|819|calcium modulating ligand##BC130325|CAMLG|819|calcium modulating ligand##AK313156|CAMLG|819|calcium modulating ligand##BC063532|CAMLG|819|calcium modulating ligand##U18242|CAMLG|819|calcium modulating ligand##HQ258172|CAMLG|819|calcium modulating ligand##AF068179|CAMLG|819|calcium modulating ligand	0.0	
chr1	116219966	116220121	reg1016126.p1	3.875	+	AB057596 NM_001172412	-34794	+	NM_001172411 NM_138959 BC065272 AF481859	-35451	+	BC032517 NM_002506 X52599	-339190	-	CU692536 DQ893219 DQ896548 D55655 AK225959 TSC_hg19_v1_chr1_-_116311307	91191	-	TSC_hg19_v1_chr1_-_116311336 AK295502 BC022288 AK313041	91308	-	AK129891 TSC_hg19_v1_chr1_-_116311410 NM_001232 AK293595	91373	-	AB057596|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172412|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##DQ893219|CASQ2|845|calsequestrin 2 (cardiac muscle)##DQ896548|CASQ2|845|calsequestrin 2 (cardiac muscle)##D55655|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK225959|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK295502|CASQ2|845|calsequestrin 2 (cardiac muscle)##BC022288|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK313041|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK129891|CASQ2|845|calsequestrin 2 (cardiac muscle)##NM_001232|CASQ2|845|calsequestrin 2 (cardiac muscle)##AK293595|CASQ2|845|calsequestrin 2 (cardiac muscle)	0.0	
chr11	67020381	67020504	reg1036339.p1	3.875	+	TSC_hg19_v1_chr11_+_67007558 AB490246 AK299725	-12859	+	AK096194 TSC_hg19_v1_chr11_+_67007484	-12958	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	-133703	+	TSC_hg19_v1_chr11_+_67033926 NM_001619	13466	+	TSC_hg19_v1_chr11_+_67033929 BC037963 BC090863	13492	+	TSC_hg19_v1_chr11_+_67034155 M80776	13711	+	AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A##AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A##AK096194|LOC100131150|100131150|uncharacterized LOC100131150##BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_001619|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC037963|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC090863|ADRBK1|156|adrenergic, beta, receptor kinase 1##M80776|ADRBK1|156|adrenergic, beta, receptor kinase 1	0.214438	CTCF.p2:-21:0.214
chr12	93643441	93643609	reg1034725.p2	3.875	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-320427	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-320482	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	-320587	-	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	128367	+	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	192161	-	TSC_hg19_v1_chr12_-_93835718 D83004	192193	-	NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.0	
chr14	77227946	77228105	reg1037052.p2	3.875	+	TSC_hg19_v1_chr14_+_77227817 AK094330	-225	+	NM_004452	-390336	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-609719	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	430	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	1027	+	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	51185	-	NM_004452|ESRRB|2103|estrogen-related receptor beta##AK000696|C14orf118|55668|chromosome 14 open reading frame 118##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)	0.0	
chr15	79271882	79272062	reg1006542.p3	3.875	+	TSC_hg19_v1_chr15_-_79237389 AL110099 BC002479 BC018821 AK309491 AK314698 D28436 AK130158 NM_004390	-34573	-	TSC_hg19_v1_chr15_-_79237350 AF426247 AF426248 CR456881 CU677980 DQ890683 DQ893772 AK295583 X16832	-34637	-	TSC_hg19_v1_chr15_+_79165343 AK300789 BC067826 AB385578 CU692730 DQ892602 DQ895837 AK310181	-106609	+	NM_153815 S62035	26029	-	L26584 CU691844 AB385192 TSC_hg19_v1_chr15_-_79382954	110927	-	AK290135 TSC_hg19_v1_chr15_-_79383114 BC040275 NM_001145648 NM_002891	111176	-	AL110099|CTSH|1512|cathepsin H##BC002479|CTSH|1512|cathepsin H##BC018821|CTSH|1512|cathepsin H##AK309491|CTSH|1512|cathepsin H##AK314698|CTSH|1512|cathepsin H##D28436|CTSH|1512|cathepsin H##AK130158|CTSH|1512|cathepsin H##NM_004390|CTSH|1512|cathepsin H##AF426247|CTSH|1512|cathepsin H##AF426248|CTSH|1512|cathepsin H##CR456881|CTSH|1512|cathepsin H##DQ890683|CTSH|1512|cathepsin H##DQ893772|CTSH|1512|cathepsin H##X16832|CTSH|1512|cathepsin H##AK300789|MORF4L1|10933|mortality factor 4 like 1##BC067826|MORF4L1|10933|mortality factor 4 like 1##DQ892602|MORF4L1|10933|mortality factor 4 like 1##DQ895837|MORF4L1|10933|mortality factor 4 like 1##AK310181|MORF4L1|10933|mortality factor 4 like 1##NM_153815|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##S62035|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##L26584|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK290135|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##BC040275|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_001145648|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_002891|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1	0.0	
chr16	85646866	85646938	reg1041372.p2	3.875	+	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	-1881	+	BC093665 BC111944 AK126284 NM_198491	-500848	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-585532	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	51	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	75640	-	BC003186 NM_016095 TSC_hg19_v1_chr16_-_85722590	75697	-	BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC003186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_016095|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.0	
chr1	89121753	89121902	reg1013499.p2	3.875	+	TSC_hg19_v1_chr1_+_87797426 BC065818	-1324412	+	TSC_hg19_v1_chr1_+_87797312 AY321514	-1324502	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	-1327146	+	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	28268	+	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	235384	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	235446	-	BC065818|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB	0.0	
chr19	49977133	49977290	reg1008509.p1	3.875	+	AK297101 TSC_hg19_v1_chr19_+_49956529 BC014895 AK024182 AK301246	-20681	+	NM_001145396 NM_153329 TSC_hg19_v1_chr19_+_49956479 AK298587 AK074136	-20730	+	TSC_hg19_v1_chr19_-_49955072 AK294687 BC001108 AK000650 AK304476 NM_017916	-22142	-	NM_001204502 NM_001459 TSC_hg19_v1_chr19_+_49977483 U04806 BC006331 BC011914 BC028001 BC126293 BC136464 BC144129	287	+	NM_001204503 U03858 AK301136 TSC_hg19_v1_chr19_+_49977846 HQ258599	645	+	TSC_hg19_v1_chr19_+_49990861 AK130605	13645	+	AK297101|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##BC014895|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK024182|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK301246|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##NM_001145396|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##NM_153329|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK298587|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK074136|ALDH16A1|126133|aldehyde dehydrogenase 16 family, member A1##AK294687|PIH1D1|55011|PIH1 domain containing 1##BC001108|PIH1D1|55011|PIH1 domain containing 1##AK000650|PIH1D1|55011|PIH1 domain containing 1##AK304476|PIH1D1|55011|PIH1 domain containing 1##NM_017916|PIH1D1|55011|PIH1 domain containing 1##NM_001204502|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##NM_001459|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##U04806|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC006331|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC011914|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC028001|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC126293|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC136464|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##BC144129|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##NM_001204503|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##U03858|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##AK301136|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##HQ258599|FLT3LG|2323|fms-related tyrosine kinase 3 ligand##AK130605|RPL13A|23521|ribosomal protein L13a	0.0	
chr2	161285919	161286015	reg1028458.p1	3.875	+	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	-155778	-	AK304203 AL831998 TSC_hg19_v1_chr2_-_161056784 AK290300 AK313944	-229172	-	AB463075 AM393800 M35198 NM_000888 BC121178 BC143656	-229380	-	CU676342 D28482 X77494 AK225887 L11289 TSC_hg19_v1_chr2_-_161350025 AK309949 BC012992 BC012993 AK297812	63992	-	BC018951 TSC_hg19_v1_chr2_-_161350319 NM_002897 NM_016836	64350	-	NM_004180 NM_133484 U59863 U63830	707498	+	BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK304203|ITGB6|3694|integrin, beta 6##AL831998|ITGB6|3694|integrin, beta 6##AK290300|ITGB6|3694|integrin, beta 6##AK313944|ITGB6|3694|integrin, beta 6##AM393800|ITGB6|3694|integrin, beta 6##M35198|ITGB6|3694|integrin, beta 6##NM_000888|ITGB6|3694|integrin, beta 6##BC121178|ITGB6|3694|integrin, beta 6##BC143656|ITGB6|3694|integrin, beta 6##D28482|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##X77494|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK225887|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##L11289|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK309949|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012992|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC012993|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##AK297812|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC018951|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_002897|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_016836|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##NM_004180|TANK|10010|TRAF family member-associated NFKB activator##NM_133484|TANK|10010|TRAF family member-associated NFKB activator##U59863|TANK|10010|TRAF family member-associated NFKB activator##U63830|TANK|10010|TRAF family member-associated NFKB activator	0.919174	CTCF.p2:-16:0.919
chr7	150148411	150148557	reg1035186.p1	3.875	+	TSC_hg19_v1_chr7_+_150148080 AL834361 BC107037	-378	+	TSC_hg19_v1_chr7_+_150147936 NM_175571	-536	+	TSC_hg19_v1_chr7_+_150147882 AK314426	-600	+	NM_153236 BC006010 BC027613	63469	+	NM_018326 TSC_hg19_v1_chr7_+_150264477 AK301441 BC020657 AK301606 BC020776 AF117333 AK001972	115992	+	BC074744 AK294989 BC069461 AK074044 AK308110 BC060760 AK026343 AJ580952 AK314667 AK300445 TSC_hg19_v1_chr7_-_150329475 CR749355	180896	-	AL834361|GIMAP8|155038|GTPase, IMAP family member 8##BC107037|GIMAP8|155038|GTPase, IMAP family member 8##NM_175571|GIMAP8|155038|GTPase, IMAP family member 8##AK314426|GIMAP8|155038|GTPase, IMAP family member 8##NM_153236|GIMAP7|168537|GTPase, IMAP family member 7##BC006010|GIMAP7|168537|GTPase, IMAP family member 7##BC027613|GIMAP7|168537|GTPase, IMAP family member 7##NM_018326|GIMAP4|55303|GTPase, IMAP family member 4##AK301441|GIMAP4|55303|GTPase, IMAP family member 4##BC020657|GIMAP4|55303|GTPase, IMAP family member 4##AK301606|GIMAP4|55303|GTPase, IMAP family member 4##BC020776|GIMAP4|55303|GTPase, IMAP family member 4##AF117333|GIMAP4|55303|GTPase, IMAP family member 4##AK001972|GIMAP4|55303|GTPase, IMAP family member 4##BC074744|GIMAP6|474344|GTPase, IMAP family member 6##AK294989|GIMAP6|474344|GTPase, IMAP family member 6##BC069461|GIMAP6|474344|GTPase, IMAP family member 6##AK074044|GIMAP6|474344|GTPase, IMAP family member 6##AK308110|GIMAP6|474344|GTPase, IMAP family member 6##BC060760|GIMAP6|474344|GTPase, IMAP family member 6##AK026343|GIMAP6|474344|GTPase, IMAP family member 6##AJ580952|GIMAP6|474344|GTPase, IMAP family member 6##AK314667|GIMAP6|474344|GTPase, IMAP family member 6##AK300445|GIMAP6|474344|GTPase, IMAP family member 6##CR749355|GIMAP6|474344|GTPase, IMAP family member 6	0.0	
chr1	10590469	10590584	reg1040902.p1	3.874	+	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-55515	+	TSC_hg19_v1_chr1_-_10532605 NM_004401 NM_213566	-57904	-	TSC_hg19_v1_chr1_-_10532555 AB590590 BT006980 CU675773 BC000037 AF103799 AF087573 BC007721 AK313317 AK222546 U91985 BC007112	-57971	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	164025	-	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	266179	-	NM_001170754	451567	-	AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_004401|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##NM_213566|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BT006980|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC000037|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF103799|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF087573|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007721|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK313317|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK222546|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##U91985|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007112|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127	0.0	
chr14	74945867	74945984	reg1038420.p2	3.874	+	NM_001105579	-53121	-	BC053325 AK023213 TSC_hg19_v1_chr14_+_74815209 AK001673	-130723	+	NM_018228 TSC_hg19_v1_chr14_+_74815173	-130756	+	CU678022 DQ891907 DQ895093 X67698 AK298975 TSC_hg19_v1_chr14_-_74959988	14061	-	AK222474 TSC_hg19_v1_chr14_-_74960013 AK300879	14089	-	TSC_hg19_v1_chr14_-_74960037 AK311931 BC002532 NM_006432	14134	-	NM_001105579|SYNDIG1L|646658|synapse differentiation inducing 1-like##BC053325|VRTN|55237|vertebrae development homolog (pig)##AK023213|VRTN|55237|vertebrae development homolog (pig)##AK001673|VRTN|55237|vertebrae development homolog (pig)##NM_018228|VRTN|55237|vertebrae development homolog (pig)##DQ891907|NPC2|10577|Niemann-Pick disease, type C2##DQ895093|NPC2|10577|Niemann-Pick disease, type C2##X67698|NPC2|10577|Niemann-Pick disease, type C2##AK298975|NPC2|10577|Niemann-Pick disease, type C2##AK222474|NPC2|10577|Niemann-Pick disease, type C2##AK300879|NPC2|10577|Niemann-Pick disease, type C2##AK311931|NPC2|10577|Niemann-Pick disease, type C2##BC002532|NPC2|10577|Niemann-Pick disease, type C2##NM_006432|NPC2|10577|Niemann-Pick disease, type C2	0.606703	CTCF.p2:0:0.607
chr14	91817329	91817445	reg1026339.p1	3.874	+	BC098567 NM_003485	-97193	-	BC128536 NM_001177676	-106536	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-236360	+	TSC_hg19_v1_chr14_-_91884159 AF070587	66761	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	66788	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	159113	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.0	
chr16	26464654	26464765	reg1042150.p2	3.874	+	AF105378 NM_006040	-761363	+	TSC_hg19_v1_chr16_-_25269141 AK303472	-1195504	-	BX648785 AK131342 NM_001012981 AK302399	-1195850	-	NM_001145545 BC031257 AK311574	613538	+	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	750118	+	AK297166 NM_001145348	750586	+	AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##BX648785|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK131342|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001012981|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK302399|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5	0.676414	CTCF.p2:9:0.676
chr20	39594807	39594950	reg1033134.p1	3.874	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	-277001	-	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-2003889	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-2039810	+	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	62616	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	62786	+	TSC_hg19_v1_chr20_+_39765861 AB210028	170984	+	BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I##AB210028|PLCG1|5335|phospholipase C, gamma 1	0.029674	
chr2	137931196	137931336	reg1034656.p1	3.874	+	NM_001080427	-182805	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-408150	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-1055590	-	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	790668	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	1328127	+	TSC_hg19_v1_chr2_+_139259500 AK021919	1328224	+	NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like	0.0	
chr2	242249132	242249290	reg1027659.p1	3.874	+	TSC_hg19_v1_chr2_-_242212511 AK309075	-36695	-	TSC_hg19_v1_chr2_-_242212245 AK300312 NM_001243900 NM_203346	-36967	-	TSC_hg19_v1_chr2_-_242212216 M64098	-36991	-	BC014455 NM_001008491 NM_006155 TSC_hg19_v1_chr2_+_242254810 D63878	5556	+	TSC_hg19_v1_chr2_-_242255074 BC001179 AK296684 AK312335	5824	-	BX647759 NM_005336 TSC_hg19_v1_chr2_-_242255118	5907	-	AK309075|HDLBP|3069|high density lipoprotein binding protein##AK300312|HDLBP|3069|high density lipoprotein binding protein##NM_001243900|HDLBP|3069|high density lipoprotein binding protein##NM_203346|HDLBP|3069|high density lipoprotein binding protein##M64098|HDLBP|3069|high density lipoprotein binding protein##BC014455|SEPT2|4735|septin 2##NM_001008491|SEPT2|4735|septin 2##NM_006155|SEPT2|4735|septin 2##D63878|SEPT2|4735|septin 2##BC001179|HDLBP|3069|high density lipoprotein binding protein##AK296684|HDLBP|3069|high density lipoprotein binding protein##AK312335|HDLBP|3069|high density lipoprotein binding protein##BX647759|HDLBP|3069|high density lipoprotein binding protein##NM_005336|HDLBP|3069|high density lipoprotein binding protein	0.0	
chr5	132089383	132089502	reg1040816.p2	3.874	+	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	-6298	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	-16225	-	NM_000589 NM_172348	-80070	+	TSC_hg19_v1_chr5_-_132112954 BC140759 BC171779 AK057797 AF179995 AF440761 AF440762 D86957 NM_001098811 NM_001098812 NM_015146	23562	-	AF440763 NM_001098813 TSC_hg19_v1_chr5_-_132113705	24145	-	TSC_hg19_v1_chr5_+_132149022 NM_175873	59585	+	AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##BC140759|SEPT8|23176|septin 8##BC171779|SEPT8|23176|septin 8##AK057797|SEPT8|23176|septin 8##AF179995|SEPT8|23176|septin 8##AF440761|SEPT8|23176|septin 8##AF440762|SEPT8|23176|septin 8##D86957|SEPT8|23176|septin 8##NM_001098811|SEPT8|23176|septin 8##NM_001098812|SEPT8|23176|septin 8##NM_015146|SEPT8|23176|septin 8##AF440763|SEPT8|23176|septin 8##NM_001098813|SEPT8|23176|septin 8##NM_175873|ANKRD43|134548|ankyrin repeat domain 43	0.080091	
chr5	137800858	137800957	reg1015299.p4	3.874	+	AY562240 TSC_hg19_v1_chr5_+_137774899 AF251041	-26001	+	TSC_hg19_v1_chr5_+_137774760 AK056193 AK291101 AK223611 BC006218 NM_016606 AK293480 AK290547	-26179	+	TSC_hg19_v1_chr5_+_137688386 BC146788 AB029005 AB527166	-112472	+	TSC_hg19_v1_chr5_+_137801167 AK298101 AK301065	264	+	TSC_hg19_v1_chr5_+_137801192 NM_001964 X52541 BC073983 M62829 M80583 BC041701 CU687282 AB591041 EU832310 EU832395	407	+	TSC_hg19_v1_chr5_-_137848536 X80916	47646	-	AY562240|REEP2|51308|receptor accessory protein 2##AF251041|REEP2|51308|receptor accessory protein 2##AK056193|REEP2|51308|receptor accessory protein 2##AK291101|REEP2|51308|receptor accessory protein 2##AK223611|REEP2|51308|receptor accessory protein 2##BC006218|REEP2|51308|receptor accessory protein 2##NM_016606|REEP2|51308|receptor accessory protein 2##AK293480|REEP2|51308|receptor accessory protein 2##AK290547|REEP2|51308|receptor accessory protein 2##BC146788|KDM3B|51780|lysine (K)-specific demethylase 3B##AB029005|KDM3B|51780|lysine (K)-specific demethylase 3B##AK298101|EGR1|1958|early growth response 1##AK301065|EGR1|1958|early growth response 1##NM_001964|EGR1|1958|early growth response 1##X52541|EGR1|1958|early growth response 1##BC073983|EGR1|1958|early growth response 1##M62829|EGR1|1958|early growth response 1##M80583|EGR1|1958|early growth response 1##BC041701|EGR1|1958|early growth response 1##EU832310|EGR1|1958|early growth response 1##EU832395|EGR1|1958|early growth response 1##X80916|ETF1|2107|eukaryotic translation termination factor 1	0.0	
chr6	106205570	106205704	reg1033545.p1	3.874	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-354642	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-354679	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-354791	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	328559	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	328598	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	341167	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.0	
chr6	40637284	40637370	reg1039574.p1	3.874	+	BC142616 AB033072 NM_020737 AK291474	-82183	-	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-735113	-	AB527188 AJ224328 NM_005943	-741942	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	369622	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	373019	+	AK223461 AK308197 AK310006 AK313288 NM_006789 BC047767 AF161698 BC069688 BC069764 AK300689	383672	+	BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2##AK223461|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK308197|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK310006|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK313288|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##NM_006789|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC047767|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AF161698|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069688|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069764|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK300689|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2	0.0	
chr9	90203281	90203405	reg1035684.p2	3.874	+	TSC_hg19_v1_chr9_+_90112781 NM_004938 X76104 BC003614 AK295119	-90475	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	-90757	+	AK127445 NM_001001709 BC132741 BC136791 HQ258059	-439742	+	NM_001912 NM_145918 TSC_hg19_v1_chr9_+_90341001	137650	+	AK075100 TSC_hg19_v1_chr9_+_90341022 BX648848	137679	+	AL832167 BX647102 BX647434 TSC_hg19_v1_chr9_+_90341033 BX537395 BX647101 BX647413 BX647435 BX648849 BX649140 X12451 AF304301 BC142983 AF217997	137697	+	NM_004938|DAPK1|1612|death-associated protein kinase 1##X76104|DAPK1|1612|death-associated protein kinase 1##AK295119|DAPK1|1612|death-associated protein kinase 1##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##NM_001912|CTSL1|1514|cathepsin L1##NM_145918|CTSL1|1514|cathepsin L1##AK075100|CTSL1|1514|cathepsin L1##BX648848|CTSL1|1514|cathepsin L1##AL832167|CTSL1|1514|cathepsin L1##BX647102|CTSL1|1514|cathepsin L1##BX647434|CTSL1|1514|cathepsin L1##BX537395|CTSL1|1514|cathepsin L1##BX647101|CTSL1|1514|cathepsin L1##BX647413|CTSL1|1514|cathepsin L1##BX647435|CTSL1|1514|cathepsin L1##BX648849|CTSL1|1514|cathepsin L1##BX649140|CTSL1|1514|cathepsin L1##X12451|CTSL1|1514|cathepsin L1##AF304301|CTSL1|1514|cathepsin L1##BC142983|CTSL1|1514|cathepsin L1##AF217997|CTSL1|1514|cathepsin L1	0.0	
chrX	17025366	17025477	reg1035861.p1	3.874	+	TSC_hg19_v1_chrX_+_16964847 AF010233 NM_001080975 NM_004726 AF511533 AF512951	-60489	+	TSC_hg19_v1_chrX_-_16888462 NM_002893	-136924	-	TSC_hg19_v1_chrX_-_16888456 X72841	-136970	-	TSC_hg19_v1_chrX_+_17393357 AK302437	367933	+	TSC_hg19_v1_chrX_+_17393541 AY436752 NM_198270	368121	+	TSC_hg19_v1_chrX_+_17393806 BC136415 BC171763	368390	+	AF010233|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_001080975|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_004726|REPS2|9185|RALBP1 associated Eps domain containing 2##AF511533|REPS2|9185|RALBP1 associated Eps domain containing 2##AF512951|REPS2|9185|RALBP1 associated Eps domain containing 2##NM_002893|RBBP7|5931|retinoblastoma binding protein 7##X72841|RBBP7|5931|retinoblastoma binding protein 7##AK302437|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AY436752|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_198270|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC136415|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##BC171763|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)	0.147911	
chr10	79003079	79003196	reg1029157.p2	3.873	+	AF267860 NM_032024	-1460619	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1841572	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1841656	-	AF118141 TSC_hg19_v1_chr10_-_79397246	394088	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	394199	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	394269	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.304324	CTCF.p2:14:0.304
chr1	154377459	154377592	reg1023806.p1	3.873	+	TSC_hg19_v1_chr1_+_154301249 AK054886	-76269	+	AY302537 NM_020452	-77250	+	TSC_hg19_v1_chr1_+_154298034 NM_001005855 X58235	-79462	+	NM_000565 NM_001206866 NM_181359 X12830 BC089410 TSC_hg19_v1_chr1_+_154377822	225	+	AK223582 BC132684 BC132686 TSC_hg19_v1_chr1_+_154377856	327	+	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	549	+	AK054886|ATP8B2|57198|ATPase, class I, type 8B, member 2##AY302537|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_020452|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_001005855|ATP8B2|57198|ATPase, class I, type 8B, member 2##NM_000565|IL6R|3570|interleukin 6 receptor##NM_001206866|IL6R|3570|interleukin 6 receptor##NM_181359|IL6R|3570|interleukin 6 receptor##X12830|IL6R|3570|interleukin 6 receptor##BC089410|IL6R|3570|interleukin 6 receptor##AK223582|IL6R|3570|interleukin 6 receptor##BC132684|IL6R|3570|interleukin 6 receptor##BC132686|IL6R|3570|interleukin 6 receptor##AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor	0.903993	CTCF.p2:83:0.904
chr14	69251339	69251425	reg1030027.p2	3.873	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-964862	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-968083	-	AK315462 NM_152443	-1082780	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	8338	-	NM_001244698 NM_004926	9248	-	NM_001244701 AB528867	11602	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr16	3628354	3628423	reg1040346.p1	3.873	+	TSC_hg19_v1_chr16_-_3627397 AY601811 NM_178844 AK090431 AK090476	-989	-	AK023359 NM_024793	-68495	+	TSC_hg19_v1_chr16_+_3551003 AB089691 NM_015041 BC017070 AB014543 AB527560	-77397	+	TSC_hg19_v1_chr16_-_3661587 NM_032444 AK122775	33195	-	NM_005223	74551	+	TSC_hg19_v1_chr16_-_3767521 U12595 BC001455 AF043254 AB528744 CU676340 DQ893476 DQ896346 BC000406 BC002994 AF154108 AK299127 BC018950 AK223049 AK223076 AK223205 BC023585 AK093344 NM_016292	139147	-	AY601811|NLRC3|197358|NLR family, CARD domain containing 3##NM_178844|NLRC3|197358|NLR family, CARD domain containing 3##AK090431|NLRC3|197358|NLR family, CARD domain containing 3##AK090476|NLRC3|197358|NLR family, CARD domain containing 3##AK023359|CLUAP1|23059|clusterin associated protein 1##NM_024793|CLUAP1|23059|clusterin associated protein 1##AB089691|CLUAP1|23059|clusterin associated protein 1##NM_015041|CLUAP1|23059|clusterin associated protein 1##BC017070|CLUAP1|23059|clusterin associated protein 1##AB014543|CLUAP1|23059|clusterin associated protein 1##NM_032444|SLX4|84464|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)##AK122775|SLX4|84464|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)##NM_005223|DNASE1|1773|deoxyribonuclease I##U12595|TRAP1|10131|TNF receptor-associated protein 1##BC001455|TRAP1|10131|TNF receptor-associated protein 1##AF043254|TRAP1|10131|TNF receptor-associated protein 1##DQ893476|TRAP1|10131|TNF receptor-associated protein 1##DQ896346|TRAP1|10131|TNF receptor-associated protein 1##BC000406|TRAP1|10131|TNF receptor-associated protein 1##BC002994|TRAP1|10131|TNF receptor-associated protein 1##AF154108|TRAP1|10131|TNF receptor-associated protein 1##AK299127|TRAP1|10131|TNF receptor-associated protein 1##BC018950|TRAP1|10131|TNF receptor-associated protein 1##AK223049|TRAP1|10131|TNF receptor-associated protein 1##AK223076|TRAP1|10131|TNF receptor-associated protein 1##AK223205|TRAP1|10131|TNF receptor-associated protein 1##BC023585|TRAP1|10131|TNF receptor-associated protein 1##AK093344|TRAP1|10131|TNF receptor-associated protein 1##NM_016292|TRAP1|10131|TNF receptor-associated protein 1	0.0	
chr19	13123933	13124055	reg1039247.p2	3.873	+	TSC_hg19_v1_chr19_+_13106288 BC052801 NM_002501 AB385580 BT019732	-17592	+	AK095926 NM_152654 BC101800 BC113476 AB070695 HQ258091	-43542	+	TSC_hg19_v1_chr19_-_13068038 AF479749 NM_052850	-55949	-	TSC_hg19_v1_chr19_+_13134807 AK297261 U18759	10810	+	TSC_hg19_v1_chr19_+_13135426 BX537794 AK295290	11403	+	TSC_hg19_v1_chr19_+_13135745 L31881 BC117113 BC117115	11766	+	NM_002501|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BT019732|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK095926|DAND5|199699|DAN domain family, member 5##NM_152654|DAND5|199699|DAN domain family, member 5##BC101800|DAND5|199699|DAN domain family, member 5##BC113476|DAND5|199699|DAN domain family, member 5##AB070695|DAND5|199699|DAN domain family, member 5##HQ258091|DAND5|199699|DAN domain family, member 5##AF479749|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##NM_052850|GADD45GIP1|90480|growth arrest and DNA-damage-inducible, gamma interacting protein 1##AK297261|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U18759|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)	0.01753	
chr22	37178010	37178190	reg1002952.p1	3.873	+	AL022729 TSC_hg19_v1_chr22_-_37172162 AK307105 AK307382 BC000566 AB209424 NM_001177701 NM_006860	-5945	-	NM_001177702	-14027	-	AB528094 AF096322 CU012974 CU013262 CU686936 HQ258186 CR456414 BC112297 BC112299 BC069612 NM_006078	-79446	-	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	37419	-	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	79008	+	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	131558	+	AL022729|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307105|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307382|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC000566|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AB209424|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177701|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_006860|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177702|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AF096322|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CU012974|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CU013262|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##HQ258186|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##CR456414|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC112297|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC112299|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC069612|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##NM_006078|CACNG2|10369|calcium channel, voltage-dependent, gamma subunit 2##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)	0.0	
chr7	33714550	33714717	reg1033824.p1	3.873	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-545552	+	TSC_hg19_v1_chr7_-_33149058 EU447007 BC025928 NM_203288	-565656	-	TSC_hg19_v1_chr7_-_33102389 AF151067 BC013292 CR533518 AB528196 AM393481 BC066914 AF312735 AK290118 AL136716 BC071652 AK314109 NM_001002010	-612311	-	AK289963 NM_133468 AK096150 BC060868	230509	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	983286	+	DQ287932 NM_015283	1363019	-	NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##EU447007|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##BC025928|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##NM_203288|RP9|6100|retinitis pigmentosa 9 (autosomal dominant)##AF151067|NT5C3|51251|5'-nucleotidase, cytosolic III##BC013292|NT5C3|51251|5'-nucleotidase, cytosolic III##CR533518|NT5C3|51251|5'-nucleotidase, cytosolic III##AM393481|NT5C3|51251|5'-nucleotidase, cytosolic III##BC066914|NT5C3|51251|5'-nucleotidase, cytosolic III##AF312735|NT5C3|51251|5'-nucleotidase, cytosolic III##AK290118|NT5C3|51251|5'-nucleotidase, cytosolic III##AL136716|NT5C3|51251|5'-nucleotidase, cytosolic III##BC071652|NT5C3|51251|5'-nucleotidase, cytosolic III##AK314109|NT5C3|51251|5'-nucleotidase, cytosolic III##NM_001002010|NT5C3|51251|5'-nucleotidase, cytosolic III##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)	0.958362	CTCF.p2:5:0.958
chr8	137492378	137492507	reg1030680.p1	3.873	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-1022241	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-1022784	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1767168	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2016664	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2433802	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3222840	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.433724	CTCF.p2:-11:0.434
chr9	127533737	127533831	reg1011613.p1	3.873	+	HQ692858 HQ709185 TSC_hg19_v1_chr9_-_127533591 U80802 AF004291 NM_001489 NM_033334 S83309 BC030600 BC042395 BC042406	-274	-	AK021895 AB074162 BC030772 TSC_hg19_v1_chr9_+_127420713 AB593023	-113080	+	TSC_hg19_v1_chr9_-_127269711 BC032501 NM_004959	-264080	-	TSC_hg19_v1_chr9_+_127539438 AK074709 NM_182487 AB119055 AY358185	5716	+	BC150645 BC171828 BC171830 BC171837 BC127949 TSC_hg19_v1_chr9_+_127615749 NM_001045476	81940	+	TSC_hg19_v1_chr9_-_127624226 BC071915 U12465 BC000348 AK291072 BC010919 D28448 NM_007209	90433	-	HQ692858|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##HQ709185|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##U80802|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AF004291|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_001489|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##NM_033334|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##S83309|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC030600|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042395|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##BC042406|NR6A1|2649|nuclear receptor subfamily 6, group A, member 1##AB593023|MIR181A2HG|100379345|MIR181A2 host gene (non-protein coding)##BC032501|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##NM_004959|NR5A1|2516|nuclear receptor subfamily 5, group A, member 1##AK074709|OLFML2A|169611|olfactomedin-like 2A##NM_182487|OLFML2A|169611|olfactomedin-like 2A##AB119055|OLFML2A|169611|olfactomedin-like 2A##AY358185|OLFML2A|169611|olfactomedin-like 2A##BC150645|WDR38|401551|WD repeat domain 38##BC171828|WDR38|401551|WD repeat domain 38##BC171830|WDR38|401551|WD repeat domain 38##BC171837|WDR38|401551|WD repeat domain 38##BC127949|WDR38|401551|WD repeat domain 38##NM_001045476|WDR38|401551|WD repeat domain 38##BC071915|RPL35|11224|ribosomal protein L35##U12465|RPL35|11224|ribosomal protein L35##BC000348|RPL35|11224|ribosomal protein L35##AK291072|RPL35|11224|ribosomal protein L35##BC010919|RPL35|11224|ribosomal protein L35##D28448|RPL35|11224|ribosomal protein L35##NM_007209|RPL35|11224|ribosomal protein L35	0.0	
chr9	35843140	35843228	reg1038183.p1	3.873	+	TSC_hg19_v1_chr9_+_35829375 BC064951 NM_001042590 BC082765	-13706	+	TSC_hg19_v1_chr9_+_35829262 NM_016446 BC043384 NM_001042589 AF188239	-13941	+	BC146808 BX648702 NM_001012446	-14449	-	AY726589 NM_001004487 BC136715 BC136716	27204	-	AY358408 NM_001039792	63004	+	HQ258184 BC104869 BC113651 NM_019897	114938	-	BC064951|TMEM8B|51754|transmembrane protein 8B##NM_001042590|TMEM8B|51754|transmembrane protein 8B##BC082765|TMEM8B|51754|transmembrane protein 8B##NM_016446|TMEM8B|51754|transmembrane protein 8B##BC043384|TMEM8B|51754|transmembrane protein 8B##NM_001042589|TMEM8B|51754|transmembrane protein 8B##AF188239|TMEM8B|51754|transmembrane protein 8B##BC146808|C9orf128|392307|chromosome 9 open reading frame 128##BX648702|C9orf128|392307|chromosome 9 open reading frame 128##NM_001012446|C9orf128|392307|chromosome 9 open reading frame 128##AY726589|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##NM_001004487|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136715|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##BC136716|OR13J1|392309|olfactory receptor, family 13, subfamily J, member 1##AY358408|HRCT1|646962|histidine rich carboxyl terminus 1##NM_001039792|HRCT1|646962|histidine rich carboxyl terminus 1##HQ258184|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC104869|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##BC113651|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2##NM_019897|OR2S2|56656|olfactory receptor, family 2, subfamily S, member 2	0.0	
chrY	1603256	1603429	reg1029629.p1	3.873	+	AK301844 NM_001173473	-80691	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-81541	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-142373	-	BC043610 GQ280263 NM_178129 AK126147	2696	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	57187	+	NM_004043 U11090	61005	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr10	112602320	112602435	reg1020940.p2	3.872	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-198248	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-258262	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-274885	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	29235	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	29337	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	76319	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.0	
chr12	4465249	4465334	reg1028177.p2	3.872	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	-34900	+	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	-82247	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-482791	-	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	23509	-	BC121097 BC121098 NM_020996 X63454	89488	-	TSC_hg19_v1_chr12_-_4647633 AJ272205 BC016908	182328	-	NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23##BC121097|FGF6|2251|fibroblast growth factor 6##BC121098|FGF6|2251|fibroblast growth factor 6##NM_020996|FGF6|2251|fibroblast growth factor 6##X63454|FGF6|2251|fibroblast growth factor 6##AJ272205|C12orf4|57102|chromosome 12 open reading frame 4##BC016908|C12orf4|57102|chromosome 12 open reading frame 4	0.04931	
chr14	59495611	59495748	reg1002598.p2	3.872	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-390933	+	AK302579 NM_001244193 AK310356 AK302718	-589253	+	NM_014749 BC066647	-600948	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	159725	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	436243	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	436377	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.0	
chr1	46039121	46039260	reg1041484.p2	3.872	+	TSC_hg19_v1_chr1_+_46016747 AK293083 BC005394	-22458	+	TSC_hg19_v1_chr1_+_46016568 BC000670 AK307237 AK307288	-22643	+	NM_001202413 NM_001202414 NM_006066 NM_153326 TSC_hg19_v1_chr1_+_46016497 AK311175 AK307068	-22702	+	NM_001195193 NM_002482 NM_152298 TSC_hg19_v1_chr1_+_46049716 AK056161 AK222778 AK222816 AK291637 AK298893 AK308001 AK299584 BC010105 BC011580 AF035191 M97856 BC009933 BC053608 BC003113 BT006757 DQ893275 DQ896606	10548	+	BC128177 BC128178 BC029888 BC065201 BC110988 AK310879 AK057646 AK303939 AK298104 NM_001114938 NM_001190182	50494	-	TSC_hg19_v1_chr1_-_46152195 BC068578 NM_021639	113052	-	AK293083|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##BC005394|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##BC000670|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307237|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307288|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_001202413|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_001202414|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_006066|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_153326|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307068|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_001195193|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##NM_002482|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##NM_152298|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK056161|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK222778|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK222816|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK291637|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK298893|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK308001|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK299584|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC010105|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC011580|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AF035191|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##M97856|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC009933|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC053608|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC003113|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BT006757|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##DQ893275|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##DQ896606|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC128177|CCDC17|149483|coiled-coil domain containing 17##BC128178|CCDC17|149483|coiled-coil domain containing 17##BC029888|CCDC17|149483|coiled-coil domain containing 17##BC065201|CCDC17|149483|coiled-coil domain containing 17##BC110988|CCDC17|149483|coiled-coil domain containing 17##AK310879|CCDC17|149483|coiled-coil domain containing 17##AK057646|CCDC17|149483|coiled-coil domain containing 17##AK303939|CCDC17|149483|coiled-coil domain containing 17##AK298104|CCDC17|149483|coiled-coil domain containing 17##NM_001114938|CCDC17|149483|coiled-coil domain containing 17##NM_001190182|CCDC17|149483|coiled-coil domain containing 17##BC068578|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1##NM_021639|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1	0.0	
chr15	31641811	31641991	reg1035044.p2	3.872	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-22563	+	NM_001243538	-118852	-	GQ502181 HM135791 NM_001252020	-188473	-	AJ430383 NM_130901	305640	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	520928	-	TSC_hg19_v1_chr15_-_32162898 AK126002	521042	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr17	29862798	29862947	reg1031728.p2	3.872	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-47811	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-144008	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-144205	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	323399	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	365794	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	365859	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.0	
chr20	52346423	52346604	reg1018454.p2	3.872	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-135714	-	AF041259 NM_006526	-146878	-	AK302570 NM_001193421	-544692	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	340549	-	AK315220 NM_003657	340790	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	444007	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr21	43305860	43305972	reg1037351.p2	3.872	+	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	-6418	-	AK027424 TSC_hg19_v1_chr21_-_43187270	-118649	-	TSC_hg19_v1_chr21_-_43187213 EU832165 EU832259 BC035755 BC110617 BC110618 AB047783 AJ278016 NM_020639	-118694	-	BC062323 AL833323 NM_199050	40873	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	68167	-	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	124555	-	AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15##AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4##NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295	0.0	
chr22	24078617	24078708	reg1027101.p2	3.872	+	TSC_hg19_v1_chr22_-_24059525 BX538181 AK056875 AK091837 AX747211	-19117	-	TSC_hg19_v1_chr22_-_24059515 BC063045 BC050388 AK300413	-19152	-	TSC_hg19_v1_chr22_-_24059494 BC033757	-19197	-	CR456615 TSC_hg19_v1_chr22_-_24093285 BC040161 NM_021916	14497	-	CU013206 CU013494 DQ893106 DQ896379 CR456610 AK312098 AF163825 AY359000 NM_013378 BC020666	17940	-	AK093880 AX748349 NM_182520	26545	+	BX538181|GUSBP11|91316|glucuronidase, beta pseudogene 11##AK056875|GUSBP11|91316|glucuronidase, beta pseudogene 11##AK091837|GUSBP11|91316|glucuronidase, beta pseudogene 11##BC063045|GUSBP11|91316|glucuronidase, beta pseudogene 11##BC050388|GUSBP11|91316|glucuronidase, beta pseudogene 11##AK300413|GUSBP11|91316|glucuronidase, beta pseudogene 11##CR456615|ZNF70|7621|zinc finger protein 70##BC040161|ZNF70|7621|zinc finger protein 70##NM_021916|ZNF70|7621|zinc finger protein 70##CU013206|VPREB3|29802|pre-B lymphocyte 3##CU013494|VPREB3|29802|pre-B lymphocyte 3##DQ893106|VPREB3|29802|pre-B lymphocyte 3##DQ896379|VPREB3|29802|pre-B lymphocyte 3##CR456610|VPREB3|29802|pre-B lymphocyte 3##AK312098|VPREB3|29802|pre-B lymphocyte 3##AF163825|VPREB3|29802|pre-B lymphocyte 3##AY359000|VPREB3|29802|pre-B lymphocyte 3##NM_013378|VPREB3|29802|pre-B lymphocyte 3##BC020666|VPREB3|29802|pre-B lymphocyte 3##AK093880|C22orf15|150248|chromosome 22 open reading frame 15##NM_182520|C22orf15|150248|chromosome 22 open reading frame 15	0.830271	CTCF.p2:16:0.830
chrX	128903458	128903597	reg1035112.p2	3.872	+	AK300954 U90724 NM_003399 BC126174 BC143901	-30551	+	BC021104 NM_017413	-114605	-	TSC_hg19_v1_chrX_+_128674247 AK226116 BC094726 NM_000276 NM_001587 U57627 AK293107 BC130612 BC144106 BC025253 AB384825	-229229	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	10360	+	TSC_hg19_v1_chrX_+_128913898 AK314869 AK292023 BC051881 AL049683 AB528892	10457	+	AK001524 BC000035 AB209807 TSC_hg19_v1_chrX_-_128977481 NM_001008222	73898	-	AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC021104|APLN|8862|apelin##NM_017413|APLN|8862|apelin##AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe##U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe##AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3##AK314869|SASH3|54440|SAM and SH3 domain containing 3##AK292023|SASH3|54440|SAM and SH3 domain containing 3##BC051881|SASH3|54440|SAM and SH3 domain containing 3##AL049683|SASH3|54440|SAM and SH3 domain containing 3##AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9	0.0	
chrX	6492972	6493055	reg1033733.p1	3.872	+	AF167078 AF167079 NM_016379	-39855	-	AK055471 BC034018 NM_181332	-346333	-	AB033086 AF376803 AX773938 NM_020742	-347126	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	572938	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	573179	-	NM_000351 M16505 J04964 AK314034	644488	+	AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S	0.995895	CTCF.p2:-11:0.996
chr1	197872218	197872329	reg1036213.p1	3.871	+	BC130608 BC130634 NM_001024594 HQ258066 BC038214	-542	+	TSC_hg19_v1_chr1_-_197744611 BC016588 NM_001195215 NM_001195216 NM_144977	-127695	-	TSC_hg19_v1_chr1_-_197744438 AK091207 AX746849 BC063877	-127808	-	AJ296272 NM_001014434 AJ277915	9366	+	TSC_hg19_v1_chr1_+_197886502 AY273889 NM_020204	14234	+	TSC_hg19_v1_chr1_+_198126162 NM_133494 AK313411	253781	+	BC130608|C1orf53|388722|chromosome 1 open reading frame 53##BC130634|C1orf53|388722|chromosome 1 open reading frame 53##NM_001024594|C1orf53|388722|chromosome 1 open reading frame 53##HQ258066|C1orf53|388722|chromosome 1 open reading frame 53##BC038214|C1orf53|388722|chromosome 1 open reading frame 53##BC016588|DENND1B|163486|DENN/MADD domain containing 1B##NM_001195215|DENND1B|163486|DENN/MADD domain containing 1B##NM_001195216|DENND1B|163486|DENN/MADD domain containing 1B##NM_144977|DENND1B|163486|DENN/MADD domain containing 1B##AK091207|DENND1B|163486|DENN/MADD domain containing 1B##BC063877|DENND1B|163486|DENN/MADD domain containing 1B##AJ296272|LHX9|56956|LIM homeobox 9##NM_001014434|LHX9|56956|LIM homeobox 9##AJ277915|LHX9|56956|LIM homeobox 9##AY273889|LHX9|56956|LIM homeobox 9##NM_020204|LHX9|56956|LIM homeobox 9##NM_133494|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##AK313411|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7	0.0	
chr12	1739109	1739290	reg1041305.p1	3.871	+	BC001749 NM_032642	-788	+	AY009399 NM_030775	-12978	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	-35848	-	AK127196 TSC_hg19_v1_chr12_+_1800187	60967	+	TSC_hg19_v1_chr12_+_1800235 AK128511 AK127111 BC051858 NM_024551	61018	+	BC048288 TSC_hg19_v1_chr12_-_1920907 AK301234	181725	-	BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AK127196|ADIPOR2|79602|adiponectin receptor 2##AK128511|ADIPOR2|79602|adiponectin receptor 2##BC051858|ADIPOR2|79602|adiponectin receptor 2##NM_024551|ADIPOR2|79602|adiponectin receptor 2##BC048288|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4##AK301234|CACNA2D4|93589|calcium channel, voltage-dependent, alpha 2/delta subunit 4	0.983551	CTCF.p2:-70:0.802
chr14	95898663	95898792	reg1033345.p2	3.871	+	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	-112544	-	TSC_hg19_v1_chr14_+_95624023 BC040596	-274706	+	TSC_hg19_v1_chr14_-_95623867 BC046934 AB023145 BC150287 NM_177438	-274935	-	AK131436 BC146604 BX248076 NM_152592	43377	-	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	102288	-	TSC_hg19_v1_chr14_+_96001352 NM_016417	102599	+	AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC046934|DICER1|23405|dicer 1, ribonuclease type III##AB023145|DICER1|23405|dicer 1, ribonuclease type III##BC150287|DICER1|23405|dicer 1, ribonuclease type III##NM_177438|DICER1|23405|dicer 1, ribonuclease type III##AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##NM_016417|GLRX5|51218|glutaredoxin 5	0.984255	CTCF.p2:-1:0.984
chr15	68055291	68055471	reg1034178.p2	3.871	+	AK293459 NM_001206804	-214040	+	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	-220359	+	TSC_hg19_v1_chr15_-_67814131 BC047537	-241225	-	NM_001031807	62559	+	AF167160 NM_016166 BC118587 BC121797 TSC_hg19_v1_chr15_+_68346652 AK314515 BC104646	291231	+	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	291280	+	AK293459|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_001206804|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5##BC047537|LOC100506686|100506686|uncharacterized LOC100506686##NM_001031807|SKOR1|390598|SKI family transcriptional corepressor 1##AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1##NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1##BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1##BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1##AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1##BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1##BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1	0.0	
chr19	47660014	47660088	reg1032587.p1	3.871	+	TSC_hg19_v1_chr19_+_47634184 AB385085 DQ891751 DQ894932 CU676224 AF110956 BT007290	-25829	+	TSC_hg19_v1_chr19_+_47634171 BC003611	-25890	+	TSC_hg19_v1_chr19_+_47634145 AK315624 AF090385 AF046025 AK090645	-25912	+	U82987 BC136481 TSC_hg19_v1_chr19_-_47734457 AF332558 NM_014417	74294	-	AB590880 AK298837 AF354654 AF354655 AF354656 NM_001127240 NM_001127241 NM_001127242	75889	-	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	99710	+	DQ891751|SAE1|10055|SUMO1 activating enzyme subunit 1##DQ894932|SAE1|10055|SUMO1 activating enzyme subunit 1##AF110956|SAE1|10055|SUMO1 activating enzyme subunit 1##BT007290|SAE1|10055|SUMO1 activating enzyme subunit 1##BC003611|SAE1|10055|SUMO1 activating enzyme subunit 1##AK315624|SAE1|10055|SUMO1 activating enzyme subunit 1##AF090385|SAE1|10055|SUMO1 activating enzyme subunit 1##AF046025|SAE1|10055|SUMO1 activating enzyme subunit 1##AK090645|SAE1|10055|SUMO1 activating enzyme subunit 1##U82987|BBC3|27113|BCL2 binding component 3##BC136481|BBC3|27113|BCL2 binding component 3##AF332558|BBC3|27113|BCL2 binding component 3##NM_014417|BBC3|27113|BCL2 binding component 3##AK298837|BBC3|27113|BCL2 binding component 3##AF354654|BBC3|27113|BCL2 binding component 3##AF354655|BBC3|27113|BCL2 binding component 3##AF354656|BBC3|27113|BCL2 binding component 3##NM_001127240|BBC3|27113|BCL2 binding component 3##NM_001127241|BBC3|27113|BCL2 binding component 3##NM_001127242|BBC3|27113|BCL2 binding component 3##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9	0.0	
chr20	61071715	61071822	reg1020724.p2	3.871	+	BC047790 NM_080473 TSC_hg19_v1_chr20_-_61051052	-20730	-	AK074919 TSC_hg19_v1_chr20_-_61002592 AK290299 NM_080833	-69160	-	TSC_hg19_v1_chr20_-_60982342 NM_031215	-89424	-	AK056985 NM_178463	75891	+	TSC_hg19_v1_chr20_+_61147924 BC110595	76186	+	TSC_hg19_v1_chr20_+_61273818 NM_016354	202035	+	BC047790|GATA5|140628|GATA binding protein 5##NM_080473|GATA5|140628|GATA binding protein 5##AK074919|C20orf151|140893|chromosome 20 open reading frame 151##AK290299|C20orf151|140893|chromosome 20 open reading frame 151##NM_080833|C20orf151|140893|chromosome 20 open reading frame 151##NM_031215|CABLES2|81928|Cdk5 and Abl enzyme substrate 2##AK056985|C20orf166|128826|chromosome 20 open reading frame 166##NM_178463|C20orf166|128826|chromosome 20 open reading frame 166##BC110595|C20orf166|128826|chromosome 20 open reading frame 166##NM_016354|SLCO4A1|28231|solute carrier organic anion transporter family, member 4A1	0.110503	
chr2	37880978	37881155	reg1035225.p1	3.871	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-309253	+	BC030706 BC012820 AB015982 NM_005813	-336873	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-422220	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	17713	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	18323	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	271366	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.0	
chr7	129073781	129073857	reg1040835.p1	3.871	+	AK316073 NM_001130722	-58336	+	TSC_hg19_v1_chr7_+_129008062 AK025372	-65731	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	-65833	+	TSC_hg19_v1_chr7_+_129074283 NM_001134336 NM_020704 AK290165 BC019064 AB032996 CU676366 AB463039 AM392619 AM392944 AM392960 AM393447	454	+	BC050400 NM_001195243 BC035417	68545	+	TSC_hg19_v1_chr7_-_129251474 AK123679	177659	-	AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001134336|FAM40B|57464|family with sequence similarity 40, member B##NM_020704|FAM40B|57464|family with sequence similarity 40, member B##AK290165|FAM40B|57464|family with sequence similarity 40, member B##BC019064|FAM40B|57464|family with sequence similarity 40, member B##AB032996|FAM40B|57464|family with sequence similarity 40, member B##AM392619|FAM40B|57464|family with sequence similarity 40, member B##AM392944|FAM40B|57464|family with sequence similarity 40, member B##AM392960|FAM40B|57464|family with sequence similarity 40, member B##AM393447|FAM40B|57464|family with sequence similarity 40, member B##BC050400|LOC100287482|100287482|uncharacterized LOC100287482##NM_001195243|LOC100287482|100287482|uncharacterized LOC100287482##BC035417|LOC100287482|100287482|uncharacterized LOC100287482	0.10655	
chr7	142273823	142274004	reg1038742.p2	3.871	+	AY358487 BC035384 AK122940 NM_001001317	-316052	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-462374	+	AF016833 NM_004668 BC120872	-578221	+	NM_001190487	100217	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	183413	+	M12426 TSC_hg19_v1_chr7_+_142495248	221282	+	AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	1.170858	CTCF.p2:-9:1.000
chr11	125298555	125298665	reg1015447.p1	3.870	+	BC045626 TSC_hg19_v1_chr11_+_125034646 AK056506 AK298999 AK316001	-263984	+	NM_022062 TSC_hg19_v1_chr11_+_125034598 AK295857 AK316268	-264032	+	TSC_hg19_v1_chr11_-_124981479 BC132716 BC132718 BC144270 BC144276 BC144277	-317141	-	TSC_hg19_v1_chr11_-_125366162 U60060 AK296554 BC009545 NM_005103 NM_022549	67531	-	TSC_hg19_v1_chr11_+_125439294 NM_001007277 NM_004879	140685	+	TSC_hg19_v1_chr11_+_125439332 AB209820	140715	+	BC045626|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK298999|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316001|PKNOX2|63876|PBX/knotted 1 homeobox 2##NM_022062|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK295857|PKNOX2|63876|PBX/knotted 1 homeobox 2##AK316268|PKNOX2|63876|PBX/knotted 1 homeobox 2##BC132716|TMEM218|219854|transmembrane protein 218##BC132718|TMEM218|219854|transmembrane protein 218##BC144270|TMEM218|219854|transmembrane protein 218##BC144276|TMEM218|219854|transmembrane protein 218##BC144277|TMEM218|219854|transmembrane protein 218##U60060|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##AK296554|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##BC009545|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_005103|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_022549|FEZ1|9638|fasciculation and elongation protein zeta 1 (zygin I)##NM_001007277|EI24|9538|etoposide induced 2.4 mRNA##NM_004879|EI24|9538|etoposide induced 2.4 mRNA##AB209820|EI24|9538|etoposide induced 2.4 mRNA	0.885112	CTCF.p2:-35:0.872
chr11	77348917	77349049	reg1038518.p2	3.870	+	AB590787 AF026003 BT019907 AF005422 BC119634 BC119635 TSC_hg19_v1_chr11_-_77348840 U53454 AK315259 X91788 NM_001293	-169	-	BC040443 NM_173039 TSC_hg19_v1_chr11_+_77300718 AB028147	-48283	+	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	-164151	-	AF380176 AB527448 TSC_hg19_v1_chr11_-_77531769 BC015360 NM_016578 AK098130	182849	-	TSC_hg19_v1_chr11_+_77532238 AF092136 AK024688 BC002752 NM_024684	183220	+	AL834171 EU446555 TSC_hg19_v1_chr11_-_77705710 CU679559 AK000455 BC018672	356701	-	AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC040443|AQP11|282679|aquaporin 11##NM_173039|AQP11|282679|aquaporin 11##AB028147|AQP11|282679|aquaporin 11##U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AF380176|RSF1|51773|remodeling and spacing factor 1##BC015360|RSF1|51773|remodeling and spacing factor 1##NM_016578|RSF1|51773|remodeling and spacing factor 1##AF092136|C11orf67|28971|chromosome 11 open reading frame 67##AK024688|C11orf67|28971|chromosome 11 open reading frame 67##BC002752|C11orf67|28971|chromosome 11 open reading frame 67##NM_024684|C11orf67|28971|chromosome 11 open reading frame 67##AL834171|INTS4|92105|integrator complex subunit 4##EU446555|INTS4|92105|integrator complex subunit 4##AK000455|INTS4|92105|integrator complex subunit 4##BC018672|INTS4|92105|integrator complex subunit 4	0.0	
chr1	234832112	234832292	reg1039166.p2	3.870	+	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-86956	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-88344	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-88371	-	TSC_hg19_v1_chr1_-_234895746 AF193050	63572	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	459887	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	460029	-	BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.0	
chr12	4228614	4228794	reg1026226.p2	3.870	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-246204	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-366322	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-366436	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	154340	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	201687	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	260096	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.0	
chr12	48336241	48336352	reg1045222.p1	3.870	+	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	-37495	-	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	-122632	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-169262	+	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	21042	+	TSC_hg19_v1_chr12_+_48357387 AK310035 AK313698 AK299154 BC107792	21124	+	NM_001844 NM_033150 TSC_hg19_v1_chr12_-_48398292	61992	-	J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C##AK310035|TMEM106C|79022|transmembrane protein 106C##AK313698|TMEM106C|79022|transmembrane protein 106C##AK299154|TMEM106C|79022|transmembrane protein 106C##BC107792|TMEM106C|79022|transmembrane protein 106C##NM_001844|COL2A1|1280|collagen, type II, alpha 1##NM_033150|COL2A1|1280|collagen, type II, alpha 1	0.993823	CTCF.p2:7:0.994
chr15	77910003	77910154	reg1034816.p2	3.870	+	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-196816	+	TSC_hg19_v1_chr15_+_77713043 AK297449 AK311376	-197047	+	TSC_hg19_v1_chr15_-_77712437 NM_024776	-197535	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	14621	-	TSC_hg19_v1_chr15_-_77924732 AK291363	14702	-	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	459875	-	AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AK297449|HMG20A|10363|high mobility group 20A##NM_024776|PEAK1|79834|NKF3 kinase family member##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B	0.950892	CTCF.p2:-17:0.951
chr15	82757807	82757958	reg1038734.p1	3.870	+	NM_198181 CR936812	-35666	+	TSC_hg19_v1_chr15_+_82647308 BC066934	-110551	+	NM_001164465	-116177	-	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	67011	-	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	186910	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	187008	+	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like	0.315969	CTCF.p2:-13:0.316
chr15	86018640	86018804	reg1034789.p2	3.870	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	-94831	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-352404	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-493396	+	AF127481 NM_144767	201545	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	319375	-	TSC_hg19_v1_chr15_-_86338178 NM_022480	319473	-	AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)	0.0	
chr19	16698150	16698330	reg1033750.p1	3.870	+	TSC_hg19_v1_chr19_+_16683381 AK094229	-14843	+	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	-15044	-	TSC_hg19_v1_chr19_-_16653256 NM_006387	-44977	-	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	40760	-	TSC_hg19_v1_chr19_-_16770944 AK025602 BC069279 BX648276	72689	-	TSC_hg19_v1_chr19_-_16770956 NM_024104	72722	-	BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##NM_006387|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26##AK025602|C19orf42|79086|chromosome 19 open reading frame 42##BC069279|C19orf42|79086|chromosome 19 open reading frame 42##BX648276|C19orf42|79086|chromosome 19 open reading frame 42##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42	0.0	
chr2	160041975	160042086	reg1032358.p1	3.870	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	-216883	+	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	-390195	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-728447	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	101118	-	AK127551 BC107570 TSC_hg19_v1_chr2_-_160472070	429984	-	BX647250 AL834381 TSC_hg19_v1_chr2_-_160473021 NM_013450 AB040909	430989	-	BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BX647250|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AL834381|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##NM_013450|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##AB040909|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	0.219838	CTCF.p2:-10:0.220
chr3	130301267	130301334	reg1034704.p1	3.870	+	AM774225 NM_001102608	-22123	+	EU085556 NM_153264 AM906078	-236882	+	TSC_hg19_v1_chr3_-_129830331 BC071676	-470951	-	BC127105 BC127106 TSC_hg19_v1_chr3_-_130465651 AK314219 BC110318 BC009899 BC017332 BC057239 NM_014602	164303	-	NM_001199180 NM_001199181 NM_001199182 AK296470	268106	+	TSC_hg19_v1_chr3_+_130612841 AB037768 NM_001199179 NM_001001485 NM_001199183 NM_001199184 AF189723 AF225981 AK304175 BC028139 NM_001199185 NM_014382 AF181120 AF181121 AK314342 NM_001001486 NM_001001487 AY268374 AY268375	311845	+	AM774225|COL6A6|131873|collagen, type VI, alpha 6##NM_001102608|COL6A6|131873|collagen, type VI, alpha 6##EU085556|COL6A5|256076|collagen, type VI, alpha 5##NM_153264|COL6A5|256076|collagen, type VI, alpha 5##AM906078|COL6A5|256076|collagen, type VI, alpha 5##BC127105|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC127106|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AK314219|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC110318|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC009899|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC017332|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC057239|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_014602|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_001199180|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199181|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199182|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK296470|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AB037768|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199179|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001485|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199183|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199184|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF189723|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF225981|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK304175|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##BC028139|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199185|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_014382|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181120|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181121|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK314342|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001486|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001487|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268374|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268375|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1	0.0	
chr4	42867623	42867715	reg1013115.p1	3.870	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	-208581	-	NM_001080505	-467814	+	AB126828 AB126829 NM_001159547 NM_207406	-712775	-	AB528853 NM_001080476	27612	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	1582884	-	AK123347 NM_198353	1583154	-	BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8	0.0	
chr8	6577992	6578086	reg1037363.p1	3.870	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	-11856	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	-12099	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	-12148	+	AY534243 AY358489 AY534242 NM_207411	115053	-	BC033298 BC047677 X92744 U73945 NM_005218	157444	-	M98331 BC093951 BC093953 BC069667 BC069710 BC069728 BC069769 NM_001926	205546	-	AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AY534243|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY358489|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY534242|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##NM_207411|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##BC033298|DEFB1|1672|defensin, beta 1##BC047677|DEFB1|1672|defensin, beta 1##X92744|DEFB1|1672|defensin, beta 1##U73945|DEFB1|1672|defensin, beta 1##NM_005218|DEFB1|1672|defensin, beta 1##M98331|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093951|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093953|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069667|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069710|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069728|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069769|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##NM_001926|DEFA6|1671|defensin, alpha 6, Paneth cell-specific	0.0	
chrX	106954270	106954451	reg1035053.p1	3.870	+	AK307748 AK312706 AK316467 TSC_hg19_v1_chrX_+_106871744 AK297968 BC001605 X15331 AK223169 DQ895833 EU176362 AB464022 CU674782	-82562	+	NM_001204402 NM_002764 TSC_hg19_v1_chrX_+_106871719 D00860	-82665	+	BC033510 NM_001169154 NM_173494	-504499	+	BC018148 Z50781 NM_001015881	5293	-	CR533450 EU831656 EU831739 TSC_hg19_v1_chrX_-_106960193 AK311834 AY007119 AK127938	5769	-	AF153603 AF228339 AB025432 AF183393 BC072446 TSC_hg19_v1_chrX_-_106960293 AL110191 NM_004089 CR933650	5921	-	AK307748|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK312706|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK316467|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK297968|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC001605|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##X15331|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK223169|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##DQ895833|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##EU176362|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##NM_001204402|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##NM_002764|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##D00860|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC033510|CXorf41|139212|chromosome X open reading frame 41##NM_001169154|CXorf41|139212|chromosome X open reading frame 41##NM_173494|CXorf41|139212|chromosome X open reading frame 41##BC018148|TSC22D3|1831|TSC22 domain family, member 3##Z50781|TSC22D3|1831|TSC22 domain family, member 3##NM_001015881|TSC22D3|1831|TSC22 domain family, member 3##CR533450|TSC22D3|1831|TSC22 domain family, member 3##EU831656|TSC22D3|1831|TSC22 domain family, member 3##EU831739|TSC22D3|1831|TSC22 domain family, member 3##AK311834|TSC22D3|1831|TSC22 domain family, member 3##AY007119|TSC22D3|1831|TSC22 domain family, member 3##AK127938|TSC22D3|1831|TSC22 domain family, member 3##AF153603|TSC22D3|1831|TSC22 domain family, member 3##AF228339|TSC22D3|1831|TSC22 domain family, member 3##AB025432|TSC22D3|1831|TSC22 domain family, member 3##AF183393|TSC22D3|1831|TSC22 domain family, member 3##BC072446|TSC22D3|1831|TSC22 domain family, member 3##AL110191|TSC22D3|1831|TSC22 domain family, member 3##NM_004089|TSC22D3|1831|TSC22 domain family, member 3##CR933650|TSC22D3|1831|TSC22 domain family, member 3	0.0	
chr10	62204393	62204503	reg1032311.p1	3.869	+	U13616 NM_020987	-54888	-	AK292927 AK092527 NM_001149	-303732	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-538124	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	128242	-	EU832293 EU832377 AK172736 BX537917 TSC_hg19_v1_chr10_-_62493273 BX648574	288729	-	TSC_hg19_v1_chr10_-_62493282 NM_001204403	288836	-	U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832293|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832377|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX537917|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX648574|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204403|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.067678	
chr1	154933794	154933918	reg1023539.p1	3.869	+	TSC_hg19_v1_chr1_-_154928604 AK022497 AK300544 AK310712 AK315551	-5245	-	TSC_hg19_v1_chr1_-_154928571 BC016852 NM_020524 AF221521 AK023219 AK303413 AK303863 AK300987	-5277	-	TSC_hg19_v1_chr1_-_154909401 BC007694 BC000237 AK130234 AK312803 BC006089 NM_006556	-24423	-	AF289598 AF457208 AB528446 DQ893379 DQ895952 TSC_hg19_v1_chr1_-_154934210 AK092389 AX747515 BC006132 BC032099	275	-	TSC_hg19_v1_chr1_-_154934259 NM_138300	402	-	AB451255 AB451379 AB527815 AK225332 TSC_hg19_v1_chr1_-_154943224 BX647136 U73377 BC011813 BC017283 AK296786 AK096169 BC033925 BX647149 NM_001130040 NM_183001	9268	-	AK022497|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK300544|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK310712|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK315551|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##BC016852|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##NM_020524|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AF221521|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK023219|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303413|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303863|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK300987|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##BC007694|PMVK|10654|phosphomevalonate kinase##AK130234|PMVK|10654|phosphomevalonate kinase##AK312803|PMVK|10654|phosphomevalonate kinase##BC006089|PMVK|10654|phosphomevalonate kinase##NM_006556|PMVK|10654|phosphomevalonate kinase##AF289598|PYGO2|90780|pygopus homolog 2 (Drosophila)##AF457208|PYGO2|90780|pygopus homolog 2 (Drosophila)##DQ893379|PYGO2|90780|pygopus homolog 2 (Drosophila)##DQ895952|PYGO2|90780|pygopus homolog 2 (Drosophila)##AK092389|PYGO2|90780|pygopus homolog 2 (Drosophila)##BC006132|PYGO2|90780|pygopus homolog 2 (Drosophila)##BC032099|PYGO2|90780|pygopus homolog 2 (Drosophila)##NM_138300|PYGO2|90780|pygopus homolog 2 (Drosophila)##AB451255|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AB451379|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AK225332|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BX647136|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##U73377|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BC011813|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BC017283|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AK296786|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##AK096169|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BC033925|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##BX647149|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##NM_001130040|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1##NM_183001|SHC1|6464|SHC (Src homology 2 domain containing) transforming protein 1	0.0	
chr1	213148479	213148591	reg1039192.p2	3.869	+	AK302675 TSC_hg19_v1_chr1_+_213124038	-24512	+	TSC_hg19_v1_chr1_+_213123945 AK290973 NM_001136474 NM_001136475 NM_024749 AK022567 AK096605 BC053836 BC051856 BC028194	-24618	+	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	-116855	+	TSC_hg19_v1_chr1_-_213188830 AK299208	40276	-	TSC_hg19_v1_chr1_-_213189125 AK294479 AK311276 AK299365 BC047469 AK295116 AF510741 AL079275 NM_144567	40592	-	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	76052	+	AK302675|VASH2|79805|vasohibin 2##AK290973|VASH2|79805|vasohibin 2##NM_001136474|VASH2|79805|vasohibin 2##NM_001136475|VASH2|79805|vasohibin 2##NM_024749|VASH2|79805|vasohibin 2##AK022567|VASH2|79805|vasohibin 2##AK096605|VASH2|79805|vasohibin 2##BC053836|VASH2|79805|vasohibin 2##BC051856|VASH2|79805|vasohibin 2##BC028194|VASH2|79805|vasohibin 2##AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK299208|ANGEL2|90806|angel homolog 2 (Drosophila)##AK294479|ANGEL2|90806|angel homolog 2 (Drosophila)##AK311276|ANGEL2|90806|angel homolog 2 (Drosophila)##AK299365|ANGEL2|90806|angel homolog 2 (Drosophila)##BC047469|ANGEL2|90806|angel homolog 2 (Drosophila)##AK295116|ANGEL2|90806|angel homolog 2 (Drosophila)##AF510741|ANGEL2|90806|angel homolog 2 (Drosophila)##AL079275|ANGEL2|90806|angel homolog 2 (Drosophila)##NM_144567|ANGEL2|90806|angel homolog 2 (Drosophila)##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1	0.0	
chr1	28199735	28199897	reg1035064.p2	3.869	+	CR749321 BC132692 BC133049 NM_001039477 NM_001105556 NM_004848 TSC_hg19_v1_chr1_+_28199054 AK303141 HQ258751 BC031655 AK303090	-744	+	AF126488 AX775985 TSC_hg19_v1_chr1_+_28157335 AK313814 AB464098 U14575	-42475	+	TSC_hg19_v1_chr1_+_28157334 AF061958 AK292077 AK297771 AK304619 NM_002713 NM_138558 AK307570 BC093017	-42488	+	CR450348 DQ892352 DQ895821 TSC_hg19_v1_chr1_-_28241083 J05249 BC001630 AK300691 AK312956 AK296898 AK298759 BC012157	41233	-	TSC_hg19_v1_chr1_-_28241258 BC021257 NM_002946	41448	-	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	61745	+	CR749321|C1orf38|9473|chromosome 1 open reading frame 38##BC132692|C1orf38|9473|chromosome 1 open reading frame 38##BC133049|C1orf38|9473|chromosome 1 open reading frame 38##NM_001039477|C1orf38|9473|chromosome 1 open reading frame 38##NM_001105556|C1orf38|9473|chromosome 1 open reading frame 38##NM_004848|C1orf38|9473|chromosome 1 open reading frame 38##AK303141|C1orf38|9473|chromosome 1 open reading frame 38##HQ258751|C1orf38|9473|chromosome 1 open reading frame 38##BC031655|C1orf38|9473|chromosome 1 open reading frame 38##AK303090|C1orf38|9473|chromosome 1 open reading frame 38##AF126488|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AX775985|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK313814|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##U14575|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AF061958|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK292077|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK297771|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK304619|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_002713|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_138558|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK307570|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##BC093017|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##CR450348|RPA2|6118|replication protein A2, 32kDa##DQ892352|RPA2|6118|replication protein A2, 32kDa##DQ895821|RPA2|6118|replication protein A2, 32kDa##J05249|RPA2|6118|replication protein A2, 32kDa##BC001630|RPA2|6118|replication protein A2, 32kDa##AK300691|RPA2|6118|replication protein A2, 32kDa##AK312956|RPA2|6118|replication protein A2, 32kDa##AK298759|RPA2|6118|replication protein A2, 32kDa##BC012157|RPA2|6118|replication protein A2, 32kDa##BC021257|RPA2|6118|replication protein A2, 32kDa##NM_002946|RPA2|6118|replication protein A2, 32kDa##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	0.143089	
chr1	38142178	38142288	reg1030682.p2	3.869	+	TSC_hg19_v1_chr1_-_38100578 NM_001038633 NM_001242908 NM_001242909 NM_001242910	-41626	-	DQ318235 AK098225 DQ165084 DQ165085 TSC_hg19_v1_chr1_-_38100359	-41910	-	TSC_hg19_v1_chr1_-_38061544 NM_013285	-80669	-	TSC_hg19_v1_chr1_-_38156198 AK316093 AK299377 BC063843 AK000515 NM_017850	13948	-	TSC_hg19_v1_chr1_+_38158167 AK001330 AK222549 AY508815 BC001651 NM_018101 AK022104	15915	+	BC000703 TSC_hg19_v1_chr1_+_38158187	15948	+	NM_001038633|RSPO1|284654|R-spondin 1##NM_001242908|RSPO1|284654|R-spondin 1##NM_001242909|RSPO1|284654|R-spondin 1##NM_001242910|RSPO1|284654|R-spondin 1##DQ318235|RSPO1|284654|R-spondin 1##AK098225|RSPO1|284654|R-spondin 1##DQ165084|RSPO1|284654|R-spondin 1##DQ165085|RSPO1|284654|R-spondin 1##NM_013285|GNL2|29889|guanine nucleotide binding protein-like 2 (nucleolar)##AK316093|C1orf109|54955|chromosome 1 open reading frame 109##AK299377|C1orf109|54955|chromosome 1 open reading frame 109##BC063843|C1orf109|54955|chromosome 1 open reading frame 109##AK000515|C1orf109|54955|chromosome 1 open reading frame 109##NM_017850|C1orf109|54955|chromosome 1 open reading frame 109##AK001330|CDCA8|55143|cell division cycle associated 8##AK222549|CDCA8|55143|cell division cycle associated 8##AY508815|CDCA8|55143|cell division cycle associated 8##BC001651|CDCA8|55143|cell division cycle associated 8##NM_018101|CDCA8|55143|cell division cycle associated 8##AK022104|CDCA8|55143|cell division cycle associated 8##BC000703|CDCA8|55143|cell division cycle associated 8	0.0	
chr2	86250571	86250705	reg1028149.p2	3.869	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-134552	-	AY152815 NM_001042437	-155846	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-269633	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	82345	-	NM_015425	82639	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	82703	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.550982	CTCF.p2:24:0.551
chr2	96932264	96932334	reg1040868.p2	3.869	+	TSC_hg19_v1_chr2_+_96932037 AK299503 AB463559 CU674690 CR456802 EU176373 EU176710	-235	+	TSC_hg19_v1_chr2_+_96931988 BC032812 EF011618 BC001395	-296	+	TSC_hg19_v1_chr2_+_96931962 AK223257 AK315568 AK056423	-332	+	TSC_hg19_v1_chr2_-_96947641 BC001417	15346	-	TSC_hg19_v1_chr2_-_96950421 AF085356	18141	-	TSC_hg19_v1_chr2_-_96956458 BC007577	24174	-	AK299503|CIAO1|9391|cytosolic iron-sulfur protein assembly 1##CR456802|CIAO1|9391|cytosolic iron-sulfur protein assembly 1##EU176373|CIAO1|9391|cytosolic iron-sulfur protein assembly 1##EU176710|CIAO1|9391|cytosolic iron-sulfur protein assembly 1##BC032812|CIAO1|9391|cytosolic iron-sulfur protein assembly 1##EF011618|CIAO1|9391|cytosolic iron-sulfur protein assembly 1##BC001395|CIAO1|9391|cytosolic iron-sulfur protein assembly 1##AK223257|CIAO1|9391|cytosolic iron-sulfur protein assembly 1##AK315568|CIAO1|9391|cytosolic iron-sulfur protein assembly 1##AK056423|CIAO1|9391|cytosolic iron-sulfur protein assembly 1##BC001417|SNRNP200|23020|small nuclear ribonucleoprotein 200kDa (U5)##AF085356|SNRNP200|23020|small nuclear ribonucleoprotein 200kDa (U5)##BC007577|SNRNP200|23020|small nuclear ribonucleoprotein 200kDa (U5)	0.0	
chr3	16588302	16588428	reg1034255.p1	3.869	+	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	-33141	-	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	-33347	-	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-281657	+	BX648638 AK303026 NM_001190811	57905	-	U65918 U66726 U66078 BC027595 NM_001351	58601	-	AB029015 NM_001144382	338086	+	D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2	0.0	
chr5	74221236	74221368	reg1034227.p1	3.869	+	AB020695 NM_015566 AK290004	-58664	-	BC039003 TSC_hg19_v1_chr5_+_74161735	-59576	+	BC005288 AK313784 AF372458 AF077615 NM_014886 AJ012409	-158215	+	AF132035 NM_016591	105421	-	AK097510 NM_001164443	311400	-	NM_000859 NM_001130996 TSC_hg19_v1_chr5_+_74633004	411702	+	AB020695|FAM169A|26049|family with sequence similarity 169, member A##NM_015566|FAM169A|26049|family with sequence similarity 169, member A##AK290004|FAM169A|26049|family with sequence similarity 169, member A##BC039003|LOC441086|441086|uncharacterized LOC441086##BC005288|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AK313784|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF372458|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF077615|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##NM_014886|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AJ012409|NSA2|10412|NSA2 ribosome biogenesis homolog (S. cerevisiae)##AF132035|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##NM_016591|GCNT4|51301|glucosaminyl (N-acetyl) transferase 4, core 2##AK097510|ANKRD31|256006|ankyrin repeat domain 31##NM_001164443|ANKRD31|256006|ankyrin repeat domain 31##NM_000859|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##NM_001130996|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase	0.808085	CTCF.p2:-23:0.808
chr5	990443	990552	reg1038931.p1	3.869	+	TSC_hg19_v1_chr5_+_892974 NM_001166260 NM_004237 AK310376 BC000404 BC019294 U96131 AB527502 EU446745 CU674196 CR456744 L40384	-97465	+	TSC_hg19_v1_chr5_-_892920 AK299157 NM_023924	-97563	-	AK023503 TSC_hg19_v1_chr5_-_892917	-97582	-	TSC_hg19_v1_chr5_-_997422 AK126199 NM_001242737	6938	-	TSC_hg19_v1_chr5_+_1008916 BC012176 AF358137 AB062887 NM_033120	18536	+	CU675797 AF105365 TSC_hg19_v1_chr5_-_1112151 AK302856 BC098390 BC007760 BC018982 NM_006598	121660	-	NM_001166260|TRIP13|9319|thyroid hormone receptor interactor 13##NM_004237|TRIP13|9319|thyroid hormone receptor interactor 13##AK310376|TRIP13|9319|thyroid hormone receptor interactor 13##BC000404|TRIP13|9319|thyroid hormone receptor interactor 13##BC019294|TRIP13|9319|thyroid hormone receptor interactor 13##U96131|TRIP13|9319|thyroid hormone receptor interactor 13##EU446745|TRIP13|9319|thyroid hormone receptor interactor 13##CR456744|TRIP13|9319|thyroid hormone receptor interactor 13##L40384|TRIP13|9319|thyroid hormone receptor interactor 13##AK299157|BRD9|65980|bromodomain containing 9##NM_023924|BRD9|65980|bromodomain containing 9##AK023503|BRD9|65980|bromodomain containing 9##AK126199|LOC100506688|100506688|uncharacterized LOC100506688##NM_001242737|LOC100506688|100506688|uncharacterized LOC100506688##BC012176|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF358137|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AB062887|NKD2|85409|naked cuticle homolog 2 (Drosophila)##NM_033120|NKD2|85409|naked cuticle homolog 2 (Drosophila)##AF105365|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##AK302856|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC098390|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC007760|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##BC018982|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7##NM_006598|SLC12A7|10723|solute carrier family 12 (potassium/chloride transporters), member 7	0.0	
chr6	131018979	131019120	reg1002805.p1	3.869	+	AB052099 NM_052913	-260788	+	AK091882 AX747235 NM_001017373	-474951	-	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	-482594	-	BC113027 NM_001195597 AK091900 AX747243 BC101422 BC101423 BC101424 BC101425 BC113026 TSC_hg19_v1_chr6_+_131148577	129513	+	TSC_hg19_v1_chr6_-_131291480 AK307764 NM_001199389	272502	-	CR749262 CR936793 NM_001252660	302838	-	AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A##AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##BC113027|LOC100507203|100507203|uncharacterized LOC100507203##NM_001195597|LOC100507203|100507203|uncharacterized LOC100507203##AK091900|LOC100507203|100507203|uncharacterized LOC100507203##BC101422|LOC100507203|100507203|uncharacterized LOC100507203##BC101423|LOC100507203|100507203|uncharacterized LOC100507203##BC101424|LOC100507203|100507203|uncharacterized LOC100507203##BC101425|LOC100507203|100507203|uncharacterized LOC100507203##BC113026|LOC100507203|100507203|uncharacterized LOC100507203##AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	0.0	
chr11	130304725	130304905	reg1005349.p2	3.868	+	TSC_hg19_v1_chr11_-_130298505 NM_007037	-6295	-	BC113874 TSC_hg19_v1_chr11_-_130298419 BC089435	-6453	-	TSC_hg19_v1_chr11_-_130184509 AK314701 BC030580 BC049375 BC071729 NM_014155	-120283	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	13847	+	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	481530	-	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	481573	-	NM_007037|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC113874|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##BC089435|ADAMTS8|11095|ADAM metallopeptidase with thrombospondin type 1 motif, 8##AK314701|ZBTB44|29068|zinc finger and BTB domain containing 44##BC030580|ZBTB44|29068|zinc finger and BTB domain containing 44##BC049375|ZBTB44|29068|zinc finger and BTB domain containing 44##BC071729|ZBTB44|29068|zinc finger and BTB domain containing 44##NM_014155|ZBTB44|29068|zinc finger and BTB domain containing 44##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19	0.0	
chr12	94633991	94634090	reg1030398.p1	3.868	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	-91536	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-562857	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-668439	-	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	219491	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	219602	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	219692	-	AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41	0.0	
chr1	42231904	42232037	reg1044174.p1	3.868	+	BC034393 X55177 M65199 NM_001956	-281651	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-524134	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-524185	-	TSC_hg19_v1_chr1_-_42384357 BC040942	152372	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	152403	-	TSC_hg19_v1_chr1_-_42501606 BC046120	269659	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.803614	CTCF.p2:0:0.804
chr14	69074768	69074884	reg1033703.p2	3.868	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-788306	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-791527	-	AK315462 NM_152443	-906224	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	184894	-	NM_001244698 NM_004926	185804	-	NM_001244701 AB528867	188158	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.15249	
chr16	89772602	89772687	reg1004924.p2	3.868	+	TSC_hg19_v1_chr16_-_89768114 BC039608 BC053588 BC027606 NM_152339	-4525	-	TSC_hg19_v1_chr16_+_89753098 AB209829 BC017342 AK292351 BC093028 AK296631 AK290485 AF153430 AK312016 BC025301 BC032704	-19535	+	TSC_hg19_v1_chr16_+_89753087 AK298386 NM_001098533 NM_001160367 NM_052987 NM_052988 AK075036 L33264 AK295397	-19565	+	TSC_hg19_v1_chr16_+_89778259 AK096286	5619	+	TSC_hg19_v1_chr16_-_89787328 AB527115 NM_004913	14683	-	TSC_hg19_v1_chr16_+_89787441 NM_152287 AK056405 BC105959 BC107603 BC111408	14831	+	BC039608|SPATA2L|124044|spermatogenesis associated 2-like##BC053588|SPATA2L|124044|spermatogenesis associated 2-like##BC027606|SPATA2L|124044|spermatogenesis associated 2-like##NM_152339|SPATA2L|124044|spermatogenesis associated 2-like##AB209829|CDK10|8558|cyclin-dependent kinase 10##BC017342|CDK10|8558|cyclin-dependent kinase 10##AK292351|CDK10|8558|cyclin-dependent kinase 10##BC093028|CDK10|8558|cyclin-dependent kinase 10##AK296631|CDK10|8558|cyclin-dependent kinase 10##AK290485|CDK10|8558|cyclin-dependent kinase 10##AF153430|CDK10|8558|cyclin-dependent kinase 10##AK312016|CDK10|8558|cyclin-dependent kinase 10##BC025301|CDK10|8558|cyclin-dependent kinase 10##BC032704|CDK10|8558|cyclin-dependent kinase 10##AK298386|CDK10|8558|cyclin-dependent kinase 10##NM_001098533|CDK10|8558|cyclin-dependent kinase 10##NM_001160367|CDK10|8558|cyclin-dependent kinase 10##NM_052987|CDK10|8558|cyclin-dependent kinase 10##NM_052988|CDK10|8558|cyclin-dependent kinase 10##AK075036|CDK10|8558|cyclin-dependent kinase 10##L33264|CDK10|8558|cyclin-dependent kinase 10##AK295397|CDK10|8558|cyclin-dependent kinase 10##AK096286|LOC100128881|100128881|uncharacterized LOC100128881##NM_004913|C16orf7|9605|chromosome 16 open reading frame 7##NM_152287|ZNF276|92822|zinc finger protein 276##AK056405|ZNF276|92822|zinc finger protein 276##BC105959|ZNF276|92822|zinc finger protein 276##BC107603|ZNF276|92822|zinc finger protein 276##BC111408|ZNF276|92822|zinc finger protein 276	0.0	
chr3	49027134	49027280	reg1027059.p1	3.868	+	AK097724 NM_001123040	-70390	-	TSC_hg19_v1_chr3_+_48956280 NM_006321 BC000422	-70924	+	TSC_hg19_v1_chr3_+_48956261 AK223550	-70951	+	TSC_hg19_v1_chr3_+_49027682 BC047566 NM_177938 NM_177939 AL713728 BC011710 AY198406 BC018731	294	+	BC060321 TSC_hg19_v1_chr3_+_49027877 CU680020 AK000269	653	+	AK295145 NM_018031 TSC_hg19_v1_chr3_+_49044739	17409	+	AK097724|C3orf71|646450|chromosome 3 open reading frame 71##NM_001123040|C3orf71|646450|chromosome 3 open reading frame 71##NM_006321|ARIH2|10425|ariadne homolog 2 (Drosophila)##BC000422|ARIH2|10425|ariadne homolog 2 (Drosophila)##AK223550|ARIH2|10425|ariadne homolog 2 (Drosophila)##BC047566|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##NM_177938|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##NM_177939|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AL713728|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC011710|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AY198406|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC018731|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC060321|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AK000269|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AK295145|WDR6|11180|WD repeat domain 6##NM_018031|WDR6|11180|WD repeat domain 6	0.0	
chr3	99176841	99176937	reg1036641.p1	3.868	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-556397	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-725302	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-725644	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	180561	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	359856	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	418102	-	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like	0.0	
chr1	156289704	156289771	reg1014114.p2	3.867	+	NM_001004319	-20310	-	TSC_hg19_v1_chr1_-_156265459 BC011575	-24278	-	BC036340 AY358450 AK296157 AK075349 BC018757 NM_144580 TSC_hg19_v1_chr1_-_156265450	-24313	-	BC014605 NM_144627	17367	+	DQ893014 DQ896259 X74801 AB529021 AK316387 TSC_hg19_v1_chr1_-_156308031 AY524046 AK293477 AK300765 BC006501	18271	-	BC008019 TSC_hg19_v1_chr1_-_156308049 AK315923 AK126400	18317	-	NM_001004319|VHLL|391104|von Hippel-Lindau tumor suppressor-like##BC011575|C1orf85|112770|chromosome 1 open reading frame 85##BC036340|C1orf85|112770|chromosome 1 open reading frame 85##AY358450|C1orf85|112770|chromosome 1 open reading frame 85##AK296157|C1orf85|112770|chromosome 1 open reading frame 85##AK075349|C1orf85|112770|chromosome 1 open reading frame 85##BC018757|C1orf85|112770|chromosome 1 open reading frame 85##NM_144580|C1orf85|112770|chromosome 1 open reading frame 85##BC014605|C1orf182|128229|chromosome 1 open reading frame 182##NM_144627|C1orf182|128229|chromosome 1 open reading frame 182##DQ893014|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##DQ896259|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##X74801|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK316387|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AY524046|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK293477|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK300765|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##BC006501|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##BC008019|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK315923|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK126400|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)	0.0	
chr12	127765395	127765488	reg1031095.p1	3.867	+	NM_052907	-1954280	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-2215373	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-2215500	+	NM_001136103	986506	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	1543002	-	BC043528 TSC_hg19_v1_chr12_+_129337985	1572543	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.729623	CTCF.p2:6:0.730
chr1	22208739	22208848	reg1032949.p1	3.867	+	AK127275 NM_001013693 BC146860	-69987	+	TSC_hg19_v1_chr1_-_22109701 AK026930 NM_001032730 NM_032236	-99094	-	TSC_hg19_v1_chr1_-_22109643 BC103724 BC067261	-99159	-	TSC_hg19_v1_chr1_-_22263804 X62515 NM_005529 M85289	54973	-	NM_007352 AK092382 AK308518 AX747509 BC005216 M18692 AK315798 AK308510 M16630	94686	+	BC005918 BC015103 D00306 NM_005747 BC007028 AK225620 AK308514 BC008383 CU675183 CU678941 DQ893182 DQ896490	119364	+	AK127275|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001013693|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##BC146860|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001032730|USP48|84196|ubiquitin specific peptidase 48##NM_032236|USP48|84196|ubiquitin specific peptidase 48##BC103724|USP48|84196|ubiquitin specific peptidase 48##BC067261|USP48|84196|ubiquitin specific peptidase 48##X62515|HSPG2|3339|heparan sulfate proteoglycan 2##NM_005529|HSPG2|3339|heparan sulfate proteoglycan 2##M85289|HSPG2|3339|heparan sulfate proteoglycan 2##NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B##M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A##M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B##BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A##D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A	0.073195	
chr12	31739656	31739826	reg1030126.p1	3.867	+	BC000024 NM_001135811 NM_021238 TSC_hg19_v1_chr12_-_31479121 NM_001135812	-260602	-	TSC_hg19_v1_chr12_-_31479085 AF212220	-260640	-	BC071966 TSC_hg19_v1_chr12_-_31479052 BC004462 AK027736 AF087885 AK026932 AL157432	-260683	-	TSC_hg19_v1_chr12_-_31743924 BC068580 NM_144973	4177	-	AK290248 NM_001135864	60352	+	BC039535 NM_173802	72379	+	BC000024|FAM60A|58516|family with sequence similarity 60, member A##NM_001135811|FAM60A|58516|family with sequence similarity 60, member A##NM_021238|FAM60A|58516|family with sequence similarity 60, member A##NM_001135812|FAM60A|58516|family with sequence similarity 60, member A##AF212220|FAM60A|58516|family with sequence similarity 60, member A##BC071966|FAM60A|58516|family with sequence similarity 60, member A##BC004462|FAM60A|58516|family with sequence similarity 60, member A##AF087885|FAM60A|58516|family with sequence similarity 60, member A##AK026932|FAM60A|58516|family with sequence similarity 60, member A##AL157432|FAM60A|58516|family with sequence similarity 60, member A##BC068580|DENND5B|160518|DENN/MADD domain containing 5B##NM_144973|DENND5B|160518|DENN/MADD domain containing 5B##AK290248|METTL20|254013|methyltransferase like 20##NM_001135864|METTL20|254013|methyltransferase like 20##BC039535|METTL20|254013|methyltransferase like 20##NM_173802|METTL20|254013|methyltransferase like 20	0.0	
chr1	242292504	242292667	reg1032984.p1	3.867	+	BC132986 BC132988 AF276659 BC127722 NM_001004343	-130211	-	NM_003686 NM_006027 AF042282 AF091740 AF060479 AF084974	-280500	+	BC007491 TSC_hg19_v1_chr1_+_242011556	-281035	+	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	320185	-	AK098092 NM_152666	395412	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	1125771	-	BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_003686|EXO1|9156|exonuclease 1##NM_006027|EXO1|9156|exonuclease 1##AF042282|EXO1|9156|exonuclease 1##AF091740|EXO1|9156|exonuclease 1##AF060479|EXO1|9156|exonuclease 1##AF084974|EXO1|9156|exonuclease 1##BC007491|EXO1|9156|exonuclease 1##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa	0.542668	CTCF.p2:40:0.543
chr13	98219318	98219416	reg1033225.p1	3.867	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	-132665	+	TSC_hg19_v1_chr13_+_98086350 AK315139 NM_021033 BC041333	-132930	+	TSC_hg19_v1_chr13_+_97999294 AF339832	-220073	+	NM_002271 BC045640	386570	+	TSC_hg19_v1_chr13_+_98628928 BX648222 AK303494 AK225286 BC001497 BC019309 DQ893033 EU176755 U72761	409465	+	TSC_hg19_v1_chr13_+_98795412 NM_001001715 NM_005766	576054	+	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family##AK315139|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_021033|RAP2A|5911|RAP2A, member of RAS oncogene family##BC041333|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_002271|IPO5|3843|importin 5##BC045640|IPO5|3843|importin 5##BX648222|IPO5|3843|importin 5##AK303494|IPO5|3843|importin 5##AK225286|IPO5|3843|importin 5##BC001497|IPO5|3843|importin 5##BC019309|IPO5|3843|importin 5##DQ893033|IPO5|3843|importin 5##EU176755|IPO5|3843|importin 5##U72761|IPO5|3843|importin 5##NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	0.0	
chr17	56402272	56402446	reg1037065.p2	3.867	+	J02694 X04876 M19507 NM_000250 TSC_hg19_v1_chr17_-_56358297	-44060	-	TSC_hg19_v1_chr17_-_56358164 BC130476	-44194	-	HQ258645 S56200 TSC_hg19_v1_chr17_-_56358145	-44227	-	AB014512 BC150279 NM_004758 NM_024418	3776	-	TSC_hg19_v1_chr17_+_56406294 AK311311 AK311208	3975	+	AX721088 TSC_hg19_v1_chr17_-_56409882	7518	-	J02694|MPO|4353|myeloperoxidase##X04876|MPO|4353|myeloperoxidase##M19507|MPO|4353|myeloperoxidase##NM_000250|MPO|4353|myeloperoxidase##BC130476|MPO|4353|myeloperoxidase##HQ258645|MPO|4353|myeloperoxidase##S56200|MPO|4353|myeloperoxidase##AB014512|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##BC150279|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##NM_004758|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##NM_024418|BZRAP1|9256|benzodiazapine receptor (peripheral) associated protein 1##AK311311|LOC100506779|100506779|uncharacterized LOC100506779##AK311208|LOC100506779|100506779|uncharacterized LOC100506779	0.0	
chr18	9543798	9543872	reg1045108.p1	3.867	+	TSC_hg19_v1_chr18_+_9475545 NM_006788 BC013126	-68238	+	TSC_hg19_v1_chr18_+_9334831 BC020490 AK315751	-208978	+	TSC_hg19_v1_chr18_+_9334800 AK027629 AK075550 NM_020648 AF196834 AJ297391	-209045	+	TSC_hg19_v1_chr18_-_9614547 AF200478 AK293869 AK292538	70669	-	AK027064 TSC_hg19_v1_chr18_-_9614566 BC060829 AK315106 AF111106 NM_001042388 NM_005134	70742	-	TSC_hg19_v1_chr18_+_9708217 AF234995 NM_006868	164374	+	NM_006788|RALBP1|10928|ralA binding protein 1##BC013126|RALBP1|10928|ralA binding protein 1##BC020490|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK315751|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK027629|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK075550|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##NM_020648|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AF196834|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AJ297391|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AF200478|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK293869|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK292538|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK027064|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##BC060829|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK315106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF111106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_001042388|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_005134|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF234995|RAB31|11031|RAB31, member RAS oncogene family##NM_006868|RAB31|11031|RAB31, member RAS oncogene family	0.0	
chr19	2612319	2612446	reg1031840.p1	3.867	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-136144	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-155422	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-155446	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	90313	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	90360	-	AK124445 TSC_hg19_v1_chr19_-_2717420	104967	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.902305	CTCF.p2:-19:0.886
chr22	18506341	18506437	reg1010245.p1	3.867	+	TSC_hg19_v1_chr22_-_18484268 AK127487	-22161	-	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-249055	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-249166	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	872	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	54299	+	TSC_hg19_v1_chr22_+_18560755 NM_001127649 BC016280 BC047320	54378	+	AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26##NM_001127649|PEX26|55670|peroxisomal biogenesis factor 26##BC016280|PEX26|55670|peroxisomal biogenesis factor 26##BC047320|PEX26|55670|peroxisomal biogenesis factor 26	0.0	
chr3	43327655	43327785	reg1032232.p1	3.867	+	TSC_hg19_v1_chr3_-_43147568 BC060861 NM_032806	-180169	-	NM_001129908 AK311059 AK311069 AK091001 AX746726	-306927	+	NM_001205272 BC062786 AK130974 TSC_hg19_v1_chr3_+_42977866 AK296046	-349862	+	TSC_hg19_v1_chr3_+_43328077 AK291360 NM_001100594 NM_017719 BC071567 AK295187 CR749621 AK314376	349	+	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	335718	-	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	335793	-	BC060861|C3orf39|84892|chromosome 3 open reading frame 39##NM_032806|C3orf39|84892|chromosome 3 open reading frame 39##NM_001129908|FAM198A|729085|family with sequence similarity 198, member A##AK311059|FAM198A|729085|family with sequence similarity 198, member A##AK311069|FAM198A|729085|family with sequence similarity 198, member A##AK091001|FAM198A|729085|family with sequence similarity 198, member A##NM_001205272|KRBOX1|100506243|KRAB box domain containing 1##BC062786|KRBOX1|100506243|KRAB box domain containing 1##AK130974|KRBOX1|100506243|KRAB box domain containing 1##AK291360|SNRK|54861|SNF related kinase##NM_001100594|SNRK|54861|SNF related kinase##NM_017719|SNRK|54861|SNF related kinase##BC071567|SNRK|54861|SNF related kinase##AK295187|SNRK|54861|SNF related kinase##CR749621|SNRK|54861|SNF related kinase##AK314376|SNRK|54861|SNF related kinase##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10	0.192191	
chr7	75760066	75760137	reg1028250.p1	3.867	+	BC001917 TSC_hg19_v1_chr7_+_75677453 AK316587 DQ893080 DQ896341 AK293460 CR536548	-82636	+	AK095803 AK290779 TSC_hg19_v1_chr7_+_75677402	-82699	+	TSC_hg19_v1_chr7_+_75677368 AF047470 NM_005918	-82723	+	TSC_hg19_v1_chr7_+_75831199 NM_001110199 BC029292	71104	+	TSC_hg19_v1_chr7_+_75931989 NM_001540 U90906 BC000510 BC012292 AF086135 X54079 AK296890	171808	+	AK311894 TSC_hg19_v1_chr7_+_75931991 BC012768 BC073768 AB020027 AL050380 DQ891304 DQ893349 DQ894489 DQ896669 AB528488 BT019888 CR407614 CR536489 BC014920	171929	+	BC001917|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK316587|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ893080|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##DQ896341|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK293460|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##CR536548|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK095803|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AK290779|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##AF047470|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##NM_005918|MDH2|4191|malate dehydrogenase 2, NAD (mitochondrial)##NM_001110199|SRRM3|222183|serine/arginine repetitive matrix 3##BC029292|SRRM3|222183|serine/arginine repetitive matrix 3##NM_001540|HSPB1|3315|heat shock 27kDa protein 1##U90906|HSPB1|3315|heat shock 27kDa protein 1##BC000510|HSPB1|3315|heat shock 27kDa protein 1##BC012292|HSPB1|3315|heat shock 27kDa protein 1##X54079|HSPB1|3315|heat shock 27kDa protein 1##AK296890|HSPB1|3315|heat shock 27kDa protein 1##AK311894|HSPB1|3315|heat shock 27kDa protein 1##BC012768|HSPB1|3315|heat shock 27kDa protein 1##BC073768|HSPB1|3315|heat shock 27kDa protein 1##AB020027|HSPB1|3315|heat shock 27kDa protein 1##AL050380|HSPB1|3315|heat shock 27kDa protein 1##DQ891304|HSPB1|3315|heat shock 27kDa protein 1##DQ893349|HSPB1|3315|heat shock 27kDa protein 1##DQ894489|HSPB1|3315|heat shock 27kDa protein 1##DQ896669|HSPB1|3315|heat shock 27kDa protein 1##BT019888|HSPB1|3315|heat shock 27kDa protein 1##CR407614|HSPB1|3315|heat shock 27kDa protein 1##CR536489|HSPB1|3315|heat shock 27kDa protein 1##BC014920|HSPB1|3315|heat shock 27kDa protein 1	0.951073	CTCF.p2:-7:0.951
chr8	28351651	28351727	reg1039461.p2	3.867	+	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	-3910	-	AK002050 AK023418 NM_018660 AB057659 AB073627	-107728	-	BC001237 TSC_hg19_v1_chr8_-_28243694	-108047	-	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	76	+	TSC_hg19_v1_chr8_+_28559032 AB011091	207386	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	207461	+	BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##BC001237|ZNF395|55893|zinc finger protein 395##NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##AB011091|EXTL3|2137|exostoses (multiple)-like 3##AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3	0.0	
chrX	55946078	55946258	reg1029290.p1	3.867	+	TSC_hg19_v1_chrX_+_55744181 NM_006064 NM_016656 AL831926 AK289407 BC034726 X90530	-201980	+	BC012934 NM_198451	-296336	+	NM_201286 BC035907	-430536	-	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	312742	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	643883	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	809523	+	NM_006064|RRAGB|10325|Ras-related GTP binding B##NM_016656|RRAGB|10325|Ras-related GTP binding B##AL831926|RRAGB|10325|Ras-related GTP binding B##AK289407|RRAGB|10325|Ras-related GTP binding B##BC034726|RRAGB|10325|Ras-related GTP binding B##X90530|RRAGB|10325|Ras-related GTP binding B##BC012934|FOXR2|139628|forkhead box R2##NM_198451|FOXR2|139628|forkhead box R2##NM_201286|USP51|158880|ubiquitin specific peptidase 51##BC035907|USP51|158880|ubiquitin specific peptidase 51##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643	0.923219	CTCF.p2:34:0.903
chr1	203255472	203255566	reg1035571.p1	3.866	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-56704	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-99593	-	BC008568 TSC_hg19_v1_chr1_-_203155877 AK312911	-99631	-	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	19170	+	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	61865	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	64690	-	U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.16018	
chr12	6555937	6556003	reg1036121.p1	3.866	+	AK315732 NM_001242 BC012160 M63928 DQ892296 EU176659 AB590221 CU680244	-1824	+	TSC_hg19_v1_chr12_+_6493333 AK095418 BC026262 AK027080 L04270 NM_002342 AB527559 DQ891995 DQ895185 CU693188	-62598	+	AK304379 NM_001159575	-69448	-	NM_018009 TSC_hg19_v1_chr12_+_6561272 BC015017 AK223163 AK001005 AK002056 AK222956 AK098035 HQ258015	5324	+	TSC_hg19_v1_chr12_-_6579844 AF060538 BC023286 AK289498 AK296294 AK303137 AK309184 NM_014231 NM_016830 NM_199245	23844	-	BC000191 TSC_hg19_v1_chr12_-_6602417 BC014329 AB049959 AF151075 AF212248 NM_016497	46474	-	AK315732|CD27|939|CD27 molecule##NM_001242|CD27|939|CD27 molecule##BC012160|CD27|939|CD27 molecule##M63928|CD27|939|CD27 molecule##DQ892296|CD27|939|CD27 molecule##EU176659|CD27|939|CD27 molecule##AK095418|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##BC026262|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK027080|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##L04270|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##NM_002342|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ891995|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ895185|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK304379|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001159575|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_018009|TAPBPL|55080|TAP binding protein-like##BC015017|TAPBPL|55080|TAP binding protein-like##AK223163|TAPBPL|55080|TAP binding protein-like##AK001005|TAPBPL|55080|TAP binding protein-like##AK002056|TAPBPL|55080|TAP binding protein-like##AK222956|TAPBPL|55080|TAP binding protein-like##AK098035|TAPBPL|55080|TAP binding protein-like##HQ258015|TAPBPL|55080|TAP binding protein-like##AF060538|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC023286|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK289498|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK296294|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK303137|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK309184|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_014231|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_016830|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_199245|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC000191|MRPL51|51258|mitochondrial ribosomal protein L51##BC014329|MRPL51|51258|mitochondrial ribosomal protein L51##AB049959|MRPL51|51258|mitochondrial ribosomal protein L51##AF151075|MRPL51|51258|mitochondrial ribosomal protein L51##AF212248|MRPL51|51258|mitochondrial ribosomal protein L51##NM_016497|MRPL51|51258|mitochondrial ribosomal protein L51	0.0	
chr15	86722231	86722332	reg1033434.p2	3.866	+	NM_152336	-37040	+	TSC_hg19_v1_chr15_-_86338178 NM_022480	-384086	-	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	-384184	-	NM_001007156 NM_001012338 NM_001243101 NM_002530 TSC_hg19_v1_chr15_-_88799971	2077685	-	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	2288347	-	AB049944 NM_022839 NM_176805	2288402	+	NM_152336|AGBL1|123624|ATP/GTP binding protein-like 1##NM_022480|KLHL25|64410|kelch-like 25 (Drosophila)##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)##NM_001007156|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001012338|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_001243101|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##NM_002530|NTRK3|4916|neurotrophic tyrosine kinase, receptor, type 3##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11	0.109055	
chr16	10847050	10847195	reg1033848.p1	3.866	+	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-9418	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-58357	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	-172632	-	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	65426	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	123990	+	BC071683 TSC_hg19_v1_chr16_-_11036171	189044	-	AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)	0.0	
chr16	69528965	69529075	reg1040268.p1	3.866	+	BC004373 AK291576 TSC_hg19_v1_chr16_+_69458565	-70456	+	TSC_hg19_v1_chr16_+_69458522 AB009282 NM_030579 BX647922 BC014431	-70504	+	TSC_hg19_v1_chr16_-_69419884 AF002999 BC024890 NM_005652	-109160	-	NM_001113178 NM_006599 NM_138713 NM_138714 NM_173214 NM_173215 TSC_hg19_v1_chr16_+_69599868	70848	+	TSC_hg19_v1_chr16_+_69599907 AB020634 BC146765 AF089824 BC089395 BC131509	70896	+	AJ243298 AJ243299 TSC_hg19_v1_chr16_+_69600112 AJ005683 AJ005684	71161	+	BC004373|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##AK291576|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##AB009282|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##NM_030579|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##BX647922|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##BC014431|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##AF002999|TERF2|7014|telomeric repeat binding factor 2##BC024890|TERF2|7014|telomeric repeat binding factor 2##NM_005652|TERF2|7014|telomeric repeat binding factor 2##NM_001113178|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_006599|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_138713|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_138714|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_173214|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_173215|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AB020634|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##BC146765|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AF089824|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##BC089395|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##BC131509|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ243298|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ243299|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ005683|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ005684|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	0.533169	CTCF.p2:-45:0.533
chr17	19912378	19912465	reg1011685.p1	3.866	+	TSC_hg19_v1_chr17_-_19881144 AK295180	-31263	-	AB590263 CU677815 DQ270159 DQ891477 DQ894666 TSC_hg19_v1_chr17_-_19881134 AK312438 BC017055 AF037439 NM_007202	-31359	-	TSC_hg19_v1_chr17_-_19771250 BC034988 AB014523 NM_001142610 NM_014683 BC039310	-141278	-	TSC_hg19_v1_chr17_+_19912678 AK094274 NM_001243439 AK295093	247	+	TSC_hg19_v1_chr17_+_19976949 AK314341	64481	+	AY816328 AY816329 NM_001033553 NM_152904 AB041533	77913	+	AK295180|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ270159|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ891477|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ894666|AKAP10|11216|A kinase (PRKA) anchor protein 10##AK312438|AKAP10|11216|A kinase (PRKA) anchor protein 10##BC017055|AKAP10|11216|A kinase (PRKA) anchor protein 10##AF037439|AKAP10|11216|A kinase (PRKA) anchor protein 10##NM_007202|AKAP10|11216|A kinase (PRKA) anchor protein 10##BC034988|ULK2|9706|unc-51-like kinase 2 (C. elegans)##AB014523|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_001142610|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_014683|ULK2|9706|unc-51-like kinase 2 (C. elegans)##BC039310|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_001243439|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK295093|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK314341|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816328|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816329|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033553|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_152904|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AB041533|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1	0.0	
chr4	46888886	46889019	reg1033837.p1	3.866	+	AB209295 AK293466 S62907 TSC_hg19_v1_chr4_-_46391998 NM_000807	-497039	-	TSC_hg19_v1_chr4_-_46391484 AK307128	-497439	-	TSC_hg19_v1_chr4_-_46391400 AK125179 NM_001114175	-497553	-	BC107855 BC035923 AX721204 NM_130902	22285	-	CU690038 DQ891679 DQ894864 EU176605 U30461 NM_001204266 NM_001204267 BC035055	106544	-	AK090780 NM_000809	107471	-	AB209295|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK293466|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##S62907|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_000807|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK307128|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK125179|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_001114175|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##BC107855|COX7B2|170712|cytochrome c oxidase subunit VIIb2##BC035923|COX7B2|170712|cytochrome c oxidase subunit VIIb2##NM_130902|COX7B2|170712|cytochrome c oxidase subunit VIIb2##DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##AK090780|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_000809|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4	0.01299	
chr5	56873722	56873812	reg1039728.p1	3.866	+	BC137470 BC137473 BX648504 NM_001017992	-95173	-	NM_001127236 AL136844 AB463051 AM392551 AM393442	-363839	+	BC113004 NM_001127235	-402494	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	882169	-	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	913527	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	1005152	+	BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family	0.0	
chr7	115550731	115550855	reg1039118.p1	3.866	+	BC040713 TSC_hg19_v1_chr7_+_114562979 AY196485	-987837	+	TSC_hg19_v1_chr7_+_114562148 AF054589 NM_001166345 NM_001166346 NM_199072	-988619	+	AF467253 NM_001172767 NM_148899 U80741 AF467258 AF467259 TSC_hg19_v1_chr7_+_114066703	-1484163	+	AJ608795 NM_001244583	57573	-	TSC_hg19_v1_chr7_-_115670796 D43945 BC029891	119993	-	TSC_hg19_v1_chr7_-_115670820 AK313546	120025	-	BC040713|MDFIC|29969|MyoD family inhibitor domain containing##AY196485|MDFIC|29969|MyoD family inhibitor domain containing##AF054589|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166345|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166346|MDFIC|29969|MyoD family inhibitor domain containing##NM_199072|MDFIC|29969|MyoD family inhibitor domain containing##AF467253|FOXP2|93986|forkhead box P2##NM_001172767|FOXP2|93986|forkhead box P2##NM_148899|FOXP2|93986|forkhead box P2##AF467258|FOXP2|93986|forkhead box P2##AF467259|FOXP2|93986|forkhead box P2##AJ608795|TFEC|22797|transcription factor EC##NM_001244583|TFEC|22797|transcription factor EC##D43945|TFEC|22797|transcription factor EC##BC029891|TFEC|22797|transcription factor EC##AK313546|TFEC|22797|transcription factor EC	0.311097	CTCF.p2:-6:0.311
chrX	1590713	1590893	reg1034524.p1	3.866	+	AK301844 NM_001173473	-18152	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-19002	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-79834	-	BC043610 GQ280263 NM_178129 AK126147	65235	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	119726	+	NM_004043 U11090	123544	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr11	130934570	130934746	reg1003517.p2	3.865	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-148270	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-148313	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-615996	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	305811	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	845966	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	846681	+	NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin	0.0	
chr1	227422740	227422845	reg1031135.p1	3.865	+	TSC_hg19_v1_chr1_+_227128004 AB073905	-294768	+	TSC_hg19_v1_chr1_+_227127998 AK074693 AK092784 AK126200 AK293571 AK297735 AX747728 AK090494 AK301012 AX746479	-294797	+	TSC_hg19_v1_chr1_+_227127991 BX648860 BC005171	-294817	+	TSC_hg19_v1_chr1_-_227506194 NM_003607 NM_014826 U59305	83258	-	TSC_hg19_v1_chr1_+_227751254 NM_178549 AK026475 AK307248 BC042500	328446	+	AK311313 TSC_hg19_v1_chr1_+_227751265	328489	+	AB073905|ADCK3|56997|aarF domain containing kinase 3##AK074693|ADCK3|56997|aarF domain containing kinase 3##AK092784|ADCK3|56997|aarF domain containing kinase 3##AK126200|ADCK3|56997|aarF domain containing kinase 3##AK293571|ADCK3|56997|aarF domain containing kinase 3##AK297735|ADCK3|56997|aarF domain containing kinase 3##AK090494|ADCK3|56997|aarF domain containing kinase 3##AK301012|ADCK3|56997|aarF domain containing kinase 3##BX648860|ADCK3|56997|aarF domain containing kinase 3##BC005171|ADCK3|56997|aarF domain containing kinase 3##NM_003607|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##NM_014826|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##U59305|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##NM_178549|ZNF678|339500|zinc finger protein 678##AK026475|ZNF678|339500|zinc finger protein 678##AK307248|ZNF678|339500|zinc finger protein 678##BC042500|ZNF678|339500|zinc finger protein 678##AK311313|ZNF678|339500|zinc finger protein 678	0.705789	CTCF.p2:-3:0.706
chr14	68750198	68750379	reg1034799.p2	3.865	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-463768	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-466989	-	AK315462 NM_152443	-581686	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	509432	-	NM_001244698 NM_004926	510342	-	NM_001244701 AB528867	512696	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.012923	
chr16	81531508	81531686	reg1033580.p1	3.865	+	AY172689 NM_030629	-2644	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-52764	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-182947	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	281300	+	TSC_hg19_v1_chr16_+_81812901 AB208914	281305	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	281333	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr16	9319526	9319623	reg1032474.p2	3.865	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-133971	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-134034	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-262279	-	BC143273 U09002 NM_001134408	956259	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	956614	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	957103	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.0	
chr17	74477235	74477415	reg1038936.p1	3.865	+	NM_001088 U40347 AB593119 BC069434	-13668	+	BC092430 NM_001166579	-27893	+	TSC_hg19_v1_chr17_-_74449273 AB051521 NM_022066	-28037	-	AK303434 AY500247 AK292166 NM_001005498	6573	-	TSC_hg19_v1_chr17_-_74497506 BC016034 AK292135 NM_024599	20134	-	AJ315162 AK098057 BC029798 AB057769 BC018822 NM_134268	56377	-	NM_001088|AANAT|15|aralkylamine N-acetyltransferase##U40347|AANAT|15|aralkylamine N-acetyltransferase##AB593119|AANAT|15|aralkylamine N-acetyltransferase##BC069434|AANAT|15|aralkylamine N-acetyltransferase##BC092430|AANAT|15|aralkylamine N-acetyltransferase##NM_001166579|AANAT|15|aralkylamine N-acetyltransferase##AB051521|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_022066|UBE2O|63893|ubiquitin-conjugating enzyme E2O##AK303434|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AY500247|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292166|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001005498|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##BC016034|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292135|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_024599|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AJ315162|CYGB|114757|cytoglobin##AK098057|CYGB|114757|cytoglobin##BC029798|CYGB|114757|cytoglobin##AB057769|CYGB|114757|cytoglobin##NM_134268|CYGB|114757|cytoglobin	0.0	
chr17	78880908	78881086	reg1036080.p2	3.865	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-362179	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-362348	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-430670	-	TSC_hg19_v1_chr17_+_78935064 BC073898	54135	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	84644	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	84697	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.0	
chr18	49214391	49214500	reg1032918.p1	3.865	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-490405	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-490733	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-491219	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	652096	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	652668	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2476547	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.462632	CTCF.p2:-20:0.463
chr4	38133834	38133956	reg1026646.p1	3.865	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-154878	+	AF095288 BC069114 BC069400 NM_006607	-171840	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-241106	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	531931	+	AF289565 TSC_hg19_v1_chr4_-_38666549	532594	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	650704	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr7	128762843	128762987	reg1029923.p1	3.865	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-67710	-	TSC_hg19_v1_chr7_-_128695168 BC009923	-67767	-	AJ133769 AF145029 TSC_hg19_v1_chr7_-_128694965 AK312580 BC068530	-68020	-	BC009989 NM_005631	65797	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	101914	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	245071	+	AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3##AJ133769|TNPO3|23534|transportin 3##AF145029|TNPO3|23534|transportin 3##AK312580|TNPO3|23534|transportin 3##BC068530|TNPO3|23534|transportin 3##BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2	0.0	
chr7	148660136	148660316	reg1006262.p2	3.865	+	TSC_hg19_v1_chr7_-_148581422 AK303637 NM_001203247 NM_001203248 NM_004456 NM_152998	-78800	-	TSC_hg19_v1_chr7_-_148581380 AK314291	-78845	-	TSC_hg19_v1_chr7_-_148581377 AK293239 AK303585	-78849	-	CU674214 DQ893573 DQ894347 TSC_hg19_v1_chr7_-_148725561 BC000425 BC001928 J05016 AK290971	65329	-	BC006344 BC011754 AK313299 TSC_hg19_v1_chr7_-_148725753	65517	-	TSC_hg19_v1_chr7_-_148725766 NM_004911	65546	-	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_001203247|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_001203248|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4##DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4##BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4##BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4##AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4##BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4##BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4##AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4##NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4	0.0	
chr9	139797083	139797150	reg1031275.p2	3.865	+	U12597 BC033810 AK054686 BC032410 TSC_hg19_v1_chr9_+_139780991	-16129	+	TSC_hg19_v1_chr9_+_139780967 BX538160 BC043492 NM_021138 AK222961 AK294607 AK298370	-16163	+	BT009863 CR541914 DQ891577 DQ894770 AB590058 TSC_hg19_v1_chr9_-_139760757 AJ005259 AB002282 AB002283 BC015500 NM_003792 NM_153200	-36378	-	TSC_hg19_v1_chr9_-_139839068 AK026081	41952	-	BC014297 TSC_hg19_v1_chr9_-_139839082 AK315738	41968	-	BC014130 TSC_hg19_v1_chr9_-_139839140 BC035355 BC031100 NM_018998	42020	-	BC033810|TRAF2|7186|TNF receptor-associated factor 2##AK054686|TRAF2|7186|TNF receptor-associated factor 2##BC032410|TRAF2|7186|TNF receptor-associated factor 2##BX538160|TRAF2|7186|TNF receptor-associated factor 2##BC043492|TRAF2|7186|TNF receptor-associated factor 2##NM_021138|TRAF2|7186|TNF receptor-associated factor 2##AK222961|TRAF2|7186|TNF receptor-associated factor 2##AK294607|TRAF2|7186|TNF receptor-associated factor 2##AK298370|TRAF2|7186|TNF receptor-associated factor 2##BT009863|EDF1|8721|endothelial differentiation-related factor 1##CR541914|EDF1|8721|endothelial differentiation-related factor 1##DQ891577|EDF1|8721|endothelial differentiation-related factor 1##DQ894770|EDF1|8721|endothelial differentiation-related factor 1##AB002282|EDF1|8721|endothelial differentiation-related factor 1##AB002283|EDF1|8721|endothelial differentiation-related factor 1##BC015500|EDF1|8721|endothelial differentiation-related factor 1##NM_003792|EDF1|8721|endothelial differentiation-related factor 1##NM_153200|EDF1|8721|endothelial differentiation-related factor 1##AK026081|FBXW5|54461|F-box and WD repeat domain containing 5##BC014297|FBXW5|54461|F-box and WD repeat domain containing 5##AK315738|FBXW5|54461|F-box and WD repeat domain containing 5##BC014130|FBXW5|54461|F-box and WD repeat domain containing 5##BC035355|FBXW5|54461|F-box and WD repeat domain containing 5##BC031100|FBXW5|54461|F-box and WD repeat domain containing 5##NM_018998|FBXW5|54461|F-box and WD repeat domain containing 5	0.0	
chr9	4383067	4383205	reg1010511.p2	3.865	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-83105	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-83173	-	TSC_hg19_v1_chr9_-_4299574 DQ438882 DQ438887 DQ438892 DQ438899 DQ438902	-83553	-	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	107301	+	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	279175	+	AK295831 NM_001039395	283533	-	AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##DQ438882|GLIS3|169792|GLIS family zinc finger 3##DQ438887|GLIS3|169792|GLIS family zinc finger 3##DQ438892|GLIS3|169792|GLIS family zinc finger 3##DQ438899|GLIS3|169792|GLIS family zinc finger 3##DQ438902|GLIS3|169792|GLIS family zinc finger 3##NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68	0.0	
chr10	134257252	134257353	reg1039064.p1	3.864	+	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	-46593	+	TSC_hg19_v1_chr10_+_134145696 AK098652 BC050097 AK295953 AB051461 BC029902 NM_001143757 AK097418	-111592	+	TSC_hg19_v1_chr10_+_134145617 NM_001143758 NM_001143759 NM_030626	-111688	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	1381	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	94010	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	342204	-	NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##AK098652|LRRC27|80313|leucine rich repeat containing 27##BC050097|LRRC27|80313|leucine rich repeat containing 27##AK295953|LRRC27|80313|leucine rich repeat containing 27##AB051461|LRRC27|80313|leucine rich repeat containing 27##BC029902|LRRC27|80313|leucine rich repeat containing 27##NM_001143757|LRRC27|80313|leucine rich repeat containing 27##AK097418|LRRC27|80313|leucine rich repeat containing 27##NM_001143758|LRRC27|80313|leucine rich repeat containing 27##NM_001143759|LRRC27|80313|leucine rich repeat containing 27##NM_030626|LRRC27|80313|leucine rich repeat containing 27##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2	0.0	
chr10	80812133	80812274	reg1041039.p1	3.864	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-1018572	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-1018647	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-1022889	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	16585	+	TSC_hg19_v1_chr10_+_80899458 AK025812	87281	+	TSC_hg19_v1_chr10_+_81003207 AB033050	190927	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.0	
chr11	16904883	16904978	reg1037687.p1	3.864	+	TSC_hg19_v1_chr11_+_16760204 BC103747 AK315382 BC007103 BC016352 BC020937 U51678 CR456882 CU675547 AK124165	-144646	+	NM_014267 TSC_hg19_v1_chr11_+_16760165	-144770	+	AF309034 NM_033326	-407005	-	TSC_hg19_v1_chr11_-_16996590 D28414	91646	-	AB385210 TSC_hg19_v1_chr11_-_17035962 BC071599 NM_175058	131035	-	X79239 AB528349 CU688732 TSC_hg19_v1_chr11_-_17099216 DQ891107 DQ894288 BC000475 BC029732 BC100032 BC006772 AK312060 BC066322 D28429 L01124 NM_001017	194309	-	BC103747|C11orf58|10944|chromosome 11 open reading frame 58##AK315382|C11orf58|10944|chromosome 11 open reading frame 58##BC007103|C11orf58|10944|chromosome 11 open reading frame 58##BC016352|C11orf58|10944|chromosome 11 open reading frame 58##BC020937|C11orf58|10944|chromosome 11 open reading frame 58##U51678|C11orf58|10944|chromosome 11 open reading frame 58##CR456882|C11orf58|10944|chromosome 11 open reading frame 58##NM_014267|C11orf58|10944|chromosome 11 open reading frame 58##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6##D28414|RPL36A|6173|ribosomal protein L36a##BC071599|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##NM_175058|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##X79239|RPS13|6207|ribosomal protein S13##DQ891107|RPS13|6207|ribosomal protein S13##DQ894288|RPS13|6207|ribosomal protein S13##BC000475|RPS13|6207|ribosomal protein S13##BC029732|RPS13|6207|ribosomal protein S13##BC100032|RPS13|6207|ribosomal protein S13##BC006772|RPS13|6207|ribosomal protein S13##AK312060|RPS13|6207|ribosomal protein S13##BC066322|RPS13|6207|ribosomal protein S13##L01124|RPS13|6207|ribosomal protein S13##NM_001017|RPS13|6207|ribosomal protein S13	0.868948	CTCF.p2:7:0.758
chr14	72631170	72631331	reg1034984.p1	3.864	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-231384	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-232097	+	AK294895 NM_001204423	-232434	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	729558	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	761885	+	AK098542 AF311602 NM_178441	822407	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.0	
chr15	51594735	51594885	reg1028378.p1	3.864	+	AY517501 NM_207381	-197338	-	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	-207960	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	-393883	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	35954	-	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	38984	+	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	320163	-	AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2	0.0	
chr16	84697434	84697550	reg1037487.p1	3.864	+	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	-15358	+	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	-45832	-	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	-45916	-	NM_005153 TSC_hg19_v1_chr16_+_84733587 BC000263	36082	+	TSC_hg19_v1_chr16_+_84733603 AK315570 CR749515	36108	+	TSC_hg19_v1_chr16_+_84733609 AK293304 AK299618	36115	+	BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)##L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_005153|USP10|9100|ubiquitin specific peptidase 10##BC000263|USP10|9100|ubiquitin specific peptidase 10##AK315570|USP10|9100|ubiquitin specific peptidase 10##CR749515|USP10|9100|ubiquitin specific peptidase 10##AK293304|USP10|9100|ubiquitin specific peptidase 10##AK299618|USP10|9100|ubiquitin specific peptidase 10	0.014296	
chr2	233914327	233914456	reg1037840.p1	3.864	+	BC069151 BC107053 NM_005383	-17010	+	TSC_hg19_v1_chr2_-_233877933 BC031573 NM_019850 AK025225 AK300953	-36441	-	TSC_hg19_v1_chr2_-_233877913 AK298315	-36484	-	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	10668	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	10725	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	245875	+	BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC031573|NGEF|25791|neuronal guanine nucleotide exchange factor##NM_019850|NGEF|25791|neuronal guanine nucleotide exchange factor##AK300953|NGEF|25791|neuronal guanine nucleotide exchange factor##AK298315|NGEF|25791|neuronal guanine nucleotide exchange factor##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.0	
chr2	65659856	65659951	reg1029716.p2	3.864	+	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	-227	-	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	-691	-	TSC_hg19_v1_chr2_-_65593867 NM_001128210	-66005	-	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	3934	+	AL832770 BC043503 NM_002398	1002620	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	1002937	+	BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_001128210|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein##AL832770|MEIS1|4211|Meis homeobox 1##BC043503|MEIS1|4211|Meis homeobox 1##NM_002398|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1	0.0	
chr8	7327248	7327366	reg1036862.p1	3.864	+	AJ628017 AF168617 AJ635328 AF168616 NM_016512 NM_058200 NM_058201 NM_058202 NM_058203	-6198	-	NM_058206 NM_058207	-17421	-	AF301470 NM_001081551	-39438	-	AJ314834 BC100848 BC100849 BC100850 BC100851 NM_001040702 NM_080389	5296	-	AB089181 AF529417 AF540978 BC100844 BC100845 BC100846 BC100847 BC110062 BC111688 NM_001040704 NM_152251	16598	-	BC140937 AB089180 AF540977 BC128437 BC128438 NM_001040703 NM_152250	17909	+	AJ628017|SPAG11B|10407|sperm associated antigen 11B##AF168617|SPAG11B|10407|sperm associated antigen 11B##AJ635328|SPAG11B|10407|sperm associated antigen 11B##AF168616|SPAG11B|10407|sperm associated antigen 11B##NM_016512|SPAG11B|10407|sperm associated antigen 11B##NM_058200|SPAG11B|10407|sperm associated antigen 11B##NM_058201|SPAG11B|10407|sperm associated antigen 11B##NM_058202|SPAG11B|10407|sperm associated antigen 11B##NM_058203|SPAG11B|10407|sperm associated antigen 11B##NM_058206|SPAG11B|10407|sperm associated antigen 11B##NM_058207|SPAG11B|10407|sperm associated antigen 11B##AF301470|DEFB103B|55894|defensin, beta 103B##NM_001081551|DEFB103A|414325|defensin, beta 103A##AJ314834|DEFB104A|140596|defensin, beta 104A##BC100848|DEFB104A|140596|defensin, beta 104A##BC100849|DEFB104A|140596|defensin, beta 104A##BC100850|DEFB104A|140596|defensin, beta 104A##BC100851|DEFB104A|140596|defensin, beta 104A##NM_001040702|DEFB104B|503618|defensin, beta 104B##NM_080389|DEFB104A|140596|defensin, beta 104A##AB089181|DEFB106A|245909|defensin, beta 106A##AF529417|DEFB106A|245909|defensin, beta 106A##AF540978|DEFB106A|245909|defensin, beta 106A##BC100844|DEFB106A|245909|defensin, beta 106A##BC100845|DEFB106A|245909|defensin, beta 106A##BC100846|DEFB106A|245909|defensin, beta 106A##BC100847|DEFB106A|245909|defensin, beta 106A##BC110062|DEFB106A|245909|defensin, beta 106A##BC111688|DEFB106A|245909|defensin, beta 106A##NM_001040704|DEFB106B|503841|defensin, beta 106B##NM_152251|DEFB106A|245909|defensin, beta 106A##BC140937|DEFB105A|245908|defensin, beta 105A##AB089180|DEFB105A|245908|defensin, beta 105A##AF540977|DEFB105A|245908|defensin, beta 105A##BC128437|DEFB105A|245908|defensin, beta 105A##BC128438|DEFB105A|245908|defensin, beta 105A##NM_001040703|DEFB105B|504180|defensin, beta 105B##NM_152250|DEFB105A|245908|defensin, beta 105A	0.998984	CTCF.p2:23:0.999
chr9	131526777	131526883	reg1035119.p1	3.864	+	CU690564 BC009280 BC048251 TSC_hg19_v1_chr9_-_131486407 AK027430 AK075332 AK315746 AK092843 AX747760 NM_032799	-40441	-	TSC_hg19_v1_chr9_+_131465139 BC032794 BC041581 BC062558 EU831416 EU831509	-61730	+	TSC_hg19_v1_chr9_+_131464821 BC023327 NM_013355	-61987	+	TSC_hg19_v1_chr9_-_131534148 AK314911 BC033884	7187	-	TSC_hg19_v1_chr9_-_131534207 BC052563 NM_006336	7428	-	NM_018201 TSC_hg19_v1_chr9_+_131549531	22690	+	BC009280|ZDHHC12|84885|zinc finger, DHHC-type containing 12##BC048251|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK027430|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK075332|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK315746|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK092843|ZDHHC12|84885|zinc finger, DHHC-type containing 12##NM_032799|ZDHHC12|84885|zinc finger, DHHC-type containing 12##BC032794|PKN3|29941|protein kinase N3##BC041581|PKN3|29941|protein kinase N3##BC062558|PKN3|29941|protein kinase N3##EU831416|PKN3|29941|protein kinase N3##EU831509|PKN3|29941|protein kinase N3##BC023327|PKN3|29941|protein kinase N3##NM_013355|PKN3|29941|protein kinase N3##AK314911|ZER1|10444|zer-1 homolog (C. elegans)##BC033884|ZER1|10444|zer-1 homolog (C. elegans)##BC052563|ZER1|10444|zer-1 homolog (C. elegans)##NM_006336|ZER1|10444|zer-1 homolog (C. elegans)##NM_018201|TBC1D13|54662|TBC1 domain family, member 13	0.847537	CTCF.p2:-2:0.848
chr10	7302588	7302706	reg1007458.p2	3.863	+	TSC_hg19_v1_chr10_+_6622460 AY007155	-680167	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	-680386	-	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-1057771	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	148603	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	150787	-	AK027849 TSC_hg19_v1_chr10_-_7659249	356570	-	AY007155|LOC439949|439949|uncharacterized LOC439949##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.0	
chr15	80260614	80260785	reg1031128.p1	3.863	+	TSC_hg19_v1_chr15_-_80216042 AF249277	-44661	-	NM_001100880 NM_001199757	-45036	-	NM_001199760	-45252	-	AB464467 BT007103 CR541937 CR541962 DQ891109 DQ894290 AY234180 U27467 AL110097 BC016281 AK304026 TSC_hg19_v1_chr15_-_80263526 U29680 Y09397 NM_001114735 NM_004049	2852	-	NM_001242911 NM_001242912 NM_001242917 NM_001242918 NM_019006 TSC_hg19_v1_chr15_+_80351970 AF061739	91243	+	TSC_hg19_v1_chr15_+_80352031 BC005283 AK312646	91330	+	AF249277|ST20|400410|suppressor of tumorigenicity 20##NM_001100880|ST20|400410|suppressor of tumorigenicity 20##NM_001199757|ST20|400410|suppressor of tumorigenicity 20##NM_001199760|ST20-MTHFS|100528021|ST20-MTHFS readthrough##BT007103|BCL2A1|597|BCL2-related protein A1##CR541937|BCL2A1|597|BCL2-related protein A1##CR541962|BCL2A1|597|BCL2-related protein A1##DQ891109|BCL2A1|597|BCL2-related protein A1##DQ894290|BCL2A1|597|BCL2-related protein A1##AY234180|BCL2A1|597|BCL2-related protein A1##U27467|BCL2A1|597|BCL2-related protein A1##AL110097|BCL2A1|597|BCL2-related protein A1##BC016281|BCL2A1|597|BCL2-related protein A1##U29680|BCL2A1|597|BCL2-related protein A1##Y09397|BCL2A1|597|BCL2-related protein A1##NM_001114735|BCL2A1|597|BCL2-related protein A1##NM_004049|BCL2A1|597|BCL2-related protein A1##NM_001242911|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242912|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242917|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242918|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_019006|ZFAND6|54469|zinc finger, AN1-type domain 6##AF061739|ZFAND6|54469|zinc finger, AN1-type domain 6##BC005283|ZFAND6|54469|zinc finger, AN1-type domain 6##AK312646|ZFAND6|54469|zinc finger, AN1-type domain 6	0.0	
chr16	14500151	14500326	reg1030281.p2	3.863	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-206040	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-219720	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-335152	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	223790	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	223895	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	226501	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.0	
chr16	65831283	65831404	reg1041632.p1	3.863	+	TSC_hg19_v1_chr16_-_65155987 AK297377	-675349	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	-675375	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	-675441	-	NM_001795 TSC_hg19_v1_chr16_+_66400538	569190	+	TSC_hg19_v1_chr16_+_66400559 U84722	569217	+	AK300461 TSC_hg19_v1_chr16_+_66400593 X59796 AK300299 AB209908 AB035304 BC096363 BC096364 BC096365 BC117520	569259	+	AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001795|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##U84722|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300461|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##X59796|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AK300299|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB209908|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##AB035304|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096363|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096364|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC096365|CDH5|1003|cadherin 5, type 2 (vascular endothelium)##BC117520|CDH5|1003|cadherin 5, type 2 (vascular endothelium)	0.0	
chr17	25783416	25783593	reg1016095.p2	3.863	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-162223	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-162382	+	NM_001190452	-3761068	+	BC035488 BC042106 NM_014238	15525	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	174664	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	174699	+	AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.0	
chr17	47301288	47301380	reg1010387.p2	3.863	+	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-13257	+	NM_001198754	-13399	-	AB037886 NM_001135186 NM_016428	-13746	+	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	6809	-	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	138246	-	BC095460 TSC_hg19_v1_chr17_-_47492215	190881	-	BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AB037886|ABI3|51225|ABI family, member 3##NM_001135186|ABI3|51225|ABI family, member 3##NM_016428|ABI3|51225|ABI family, member 3##BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC095460|PHB|5245|prohibitin	0.0	
chr20	34090302	34090402	reg1035775.p1	3.863	+	TSC_hg19_v1_chr20_+_34042987 AK307861 AB621828 AF049105 NM_007186	-47278	+	AB593125 U13660 NM_000557	-64362	-	TSC_hg19_v1_chr20_-_33999791 AK225281 AK293149 BC119013 BC122862 AY050659 NM_001184977 NM_018244 NM_199487	-90490	-	AK058089 AK310337 NM_001145350	27111	-	NM_015966 NM_198398 TSC_hg19_v1_chr20_+_34129827 AF308298 AF077030 AF151812 EF206690 BC014014	39450	+	AK074550 BC009765 TSC_hg19_v1_chr20_+_34129829 AK096484 AK300916	39478	+	AK307861|CEP250|11190|centrosomal protein 250kDa##AF049105|CEP250|11190|centrosomal protein 250kDa##NM_007186|CEP250|11190|centrosomal protein 250kDa##AB593125|GDF5|8200|growth differentiation factor 5##U13660|GDF5|8200|growth differentiation factor 5##NM_000557|GDF5|8200|growth differentiation factor 5##AK225281|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293149|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC119013|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC122862|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AY050659|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_001184977|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_018244|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_199487|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK058089|C20orf173|140873|chromosome 20 open reading frame 173##AK310337|C20orf173|140873|chromosome 20 open reading frame 173##NM_001145350|C20orf173|140873|chromosome 20 open reading frame 173##NM_015966|ERGIC3|51614|ERGIC and golgi 3##NM_198398|ERGIC3|51614|ERGIC and golgi 3##AF308298|ERGIC3|51614|ERGIC and golgi 3##AF077030|ERGIC3|51614|ERGIC and golgi 3##AF151812|ERGIC3|51614|ERGIC and golgi 3##EF206690|ERGIC3|51614|ERGIC and golgi 3##BC014014|ERGIC3|51614|ERGIC and golgi 3##AK074550|ERGIC3|51614|ERGIC and golgi 3##BC009765|ERGIC3|51614|ERGIC and golgi 3##AK096484|ERGIC3|51614|ERGIC and golgi 3##AK300916|ERGIC3|51614|ERGIC and golgi 3	0.0	
chr22	19760697	19760822	reg1020835.p2	3.863	+	AF012130 AF012131 AF373867 NM_005992 NM_080646 NM_080647	-16534	+	NM_000407 J03259	-49692	+	L20860 TSC_hg19_v1_chr22_+_19710169	-50616	+	TSC_hg19_v1_chr22_-_19842337 AK291262 BX640785 BX640969 BX640998	81582	-	TSC_hg19_v1_chr22_-_19842398 BC012060 NM_024627 BC008696 AB051432 AL832509 AF301895 AF238328 AY007378 NM_053004	81646	-	TSC_hg19_v1_chr22_-_19929293 AB209724	168519	-	AF012130|TBX1|6899|T-box 1##AF012131|TBX1|6899|T-box 1##AF373867|TBX1|6899|T-box 1##NM_005992|TBX1|6899|T-box 1##NM_080646|TBX1|6899|T-box 1##NM_080647|TBX1|6899|T-box 1##NM_000407|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide##J03259|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide##L20860|SEPT5-GP1BB|100526833|SEPT5-GP1BB readthrough##AK291262|C22orf29|79680|chromosome 22 open reading frame 29##BX640785|C22orf29|79680|chromosome 22 open reading frame 29##BX640969|C22orf29|79680|chromosome 22 open reading frame 29##BX640998|C22orf29|79680|chromosome 22 open reading frame 29##BC012060|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_024627|C22orf29|79680|chromosome 22 open reading frame 29##BC008696|C22orf29|79680|chromosome 22 open reading frame 29##AB051432|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AL832509|C22orf29|79680|chromosome 22 open reading frame 29##AF301895|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AF238328|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AY007378|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_053004|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AB209724|TXNRD2|10587|thioredoxin reductase 2	0.830298	CTCF.p2:18:0.786
chr22	25828019	25828148	reg1036009.p2	3.863	+	BC139736 NM_001135772	-50540	-	AL137651 NM_182492	-69560	-	NM_000496	-212472	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	15993	+	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	132716	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	132863	+	BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_000496|CRYBB2|1415|crystallin, beta B2##BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2	0.322392	CTCF.p2:17:0.322
chr2	239035818	239035999	reg1026920.p2	3.863	+	NM_194312 AK124559	-26921	+	TSC_hg19_v1_chr2_+_238969747 BC000586 AK293283	-66141	+	TSC_hg19_v1_chr2_+_238969669 AK301009 BC007891 AF175767 AK298409 DQ893234 DQ896564 CU675851	-66228	+	NM_198582	11454	+	CR533533 FJ491380 FJ491381 CU675457 AB590373 DQ892800 DQ896047 EU832279 EU832364 TSC_hg19_v1_chr2_-_239112267 AL136850 BC035746 AY024365	76331	-	TSC_hg19_v1_chr2_-_239112326 BC006576 HQ658059 HQ658060 NM_030768	76414	-	NM_194312|ESPNL|339768|espin-like##AK124559|ESPNL|339768|espin-like##BC000586|SCLY|51540|selenocysteine lyase##AK293283|SCLY|51540|selenocysteine lyase##AK301009|SCLY|51540|selenocysteine lyase##BC007891|SCLY|51540|selenocysteine lyase##AF175767|SCLY|51540|selenocysteine lyase##AK298409|SCLY|51540|selenocysteine lyase##DQ893234|SCLY|51540|selenocysteine lyase##DQ896564|SCLY|51540|selenocysteine lyase##NM_198582|KLHL30|377007|kelch-like 30 (Drosophila)##CR533533|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##FJ491380|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##FJ491381|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##DQ892800|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##DQ896047|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##EU832279|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##EU832364|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##AL136850|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##BC035746|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##AY024365|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##BC006576|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##HQ658059|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##HQ658060|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase##NM_030768|ILKAP|80895|integrin-linked kinase-associated serine/threonine phosphatase	0.0	
chr2	62635883	62635949	reg1005737.p1	3.863	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-212650	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-503087	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-520130	-	BC047439 AK091902 AX747245 NM_198276	97623	-	AK292545 NM_001142615	265069	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	297050	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr5	140019063	140019244	reg1025362.p2	3.863	+	TSC_hg19_v1_chr5_+_140019047 NM_018502 AK301502 AK308722 AK097088 AK289495 BC001910	-105	+	NM_001040021 NM_001174104 NM_001174105	-5868	-	NM_000591	-6119	-	CR457016 TSC_hg19_v1_chr5_-_140027216 BC003674	8044	-	TSC_hg19_v1_chr5_-_140027241 AF077029 AK311095 NM_001185012 NM_002488	8147	-	AF182645 NM_006083 TSC_hg19_v1_chr5_+_140027399 AK225924	8240	+	NM_018502|TMCO6|55374|transmembrane and coiled-coil domains 6##AK301502|TMCO6|55374|transmembrane and coiled-coil domains 6##AK308722|TMCO6|55374|transmembrane and coiled-coil domains 6##AK097088|TMCO6|55374|transmembrane and coiled-coil domains 6##AK289495|TMCO6|55374|transmembrane and coiled-coil domains 6##BC001910|TMCO6|55374|transmembrane and coiled-coil domains 6##NM_001040021|CD14|929|CD14 molecule##NM_001174104|CD14|929|CD14 molecule##NM_001174105|CD14|929|CD14 molecule##NM_000591|CD14|929|CD14 molecule##CR457016|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##BC003674|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##AF077029|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##NM_001185012|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##NM_002488|NDUFA2|4695|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa##AF182645|IK|3550|IK cytokine, down-regulator of HLA II##NM_006083|IK|3550|IK cytokine, down-regulator of HLA II##AK225924|IK|3550|IK cytokine, down-regulator of HLA II	0.037423	
chr6	150922045	150922156	reg1029160.p2	3.863	+	NM_001029884 AK293288 TSC_hg19_v1_chr6_+_150921038	-1080	+	AY259176 AY259177 NM_001164694 NM_001164695 NM_203395 AY957659 AY957660 AY424901 AY424902 BC056253 CU691140 AK129950 AY957662	-231942	+	TSC_hg19_v1_chr6_+_150464179 NM_030949 BC015773 AF308297 DQ892197 DQ895392	-457859	+	NM_001242767 NM_001242769 NM_015440 TSC_hg19_v1_chr6_+_151186837 AY374130 AY374131	264732	+	TSC_hg19_v1_chr6_+_151186884 BC136685 BC144368 BC144369 AB127387	264821	+	TSC_hg19_v1_chr6_+_151187064 AL117452	265001	+	NM_001029884|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AK293288|PLEKHG1|57480|pleckstrin homology domain containing, family G (with RhoGef domain) member 1##AY259176|IYD|389434|iodotyrosine deiodinase##AY259177|IYD|389434|iodotyrosine deiodinase##NM_001164694|IYD|389434|iodotyrosine deiodinase##NM_001164695|IYD|389434|iodotyrosine deiodinase##NM_203395|IYD|389434|iodotyrosine deiodinase##AY957659|IYD|389434|iodotyrosine deiodinase##AY957660|IYD|389434|iodotyrosine deiodinase##AY424901|IYD|389434|iodotyrosine deiodinase##AY424902|IYD|389434|iodotyrosine deiodinase##BC056253|IYD|389434|iodotyrosine deiodinase##AK129950|IYD|389434|iodotyrosine deiodinase##AY957662|IYD|389434|iodotyrosine deiodinase##NM_030949|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##BC015773|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##AF308297|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ892197|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##DQ895392|PPP1R14C|81706|protein phosphatase 1, regulatory (inhibitor) subunit 14C##NM_001242767|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_001242769|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##NM_015440|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374130|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AY374131|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC136685|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144368|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##BC144369|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AB127387|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like##AL117452|MTHFD1L|25902|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like	0.118532	
chr6	161156398	161156467	reg1027915.p1	3.863	+	NM_000301 NM_001168338 AK308036 AK312966 AK298338 X05199 M74220 BC060513	-33171	+	NM_005577	-69026	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	-387038	+	TSC_hg19_v1_chr6_+_161412797 BC146770 D86968	256310	+	TSC_hg19_v1_chr6_+_161412815 AF002715 NM_005922 NM_006724	256382	+	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	256426	+	NM_000301|PLG|5340|plasminogen##NM_001168338|PLG|5340|plasminogen##AK308036|PLG|5340|plasminogen##AK312966|PLG|5340|plasminogen##AK298338|PLG|5340|plasminogen##X05199|PLG|5340|plasminogen##M74220|PLG|5340|plasminogen##BC060513|PLG|5340|plasminogen##NM_005577|LPA|4018|lipoprotein, Lp(a)##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##BC146770|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##D86968|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AF002715|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_005922|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_006724|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4	0.0	
chr6	16553010	16553154	reg1034616.p2	3.863	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-314231	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-409772	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-423645	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	208615	-	NM_001190766	549406	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	728772	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.0	
chr8	27234525	27234681	reg1040365.p1	3.863	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-51526	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-51551	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-51586	+	AK314787 U62431 NM_000742	102168	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	114055	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	237602	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	0.553665	CTCF.p2:19:0.554
chr9	111906359	111906475	reg1030816.p2	3.863	+	TSC_hg19_v1_chr9_-_111882212 BC142984 AF153415 NM_032012	-24197	-	TSC_hg19_v1_chr9_-_111882206 AK299952	-24212	-	AB451283 AB451415 HQ258655 TSC_hg19_v1_chr9_-_111775780 BC117208 BC117234 AF080071 AF006070 AF135021 NM_003798 U97067 AF030233 AK314677 AK022926 AK223230 AK022834	-130649	-	TSC_hg19_v1_chr9_-_111929489 AF155065 NM_014334	23112	-	TSC_hg19_v1_chr9_-_112083007 AF153416 AF153418 NM_018424 NM_019114	176595	-	TSC_hg19_v1_chr9_-_112083330 AB032179	176873	-	AF153415|C9orf5|23731|chromosome 9 open reading frame 5##NM_032012|C9orf5|23731|chromosome 9 open reading frame 5##AK299952|C9orf5|23731|chromosome 9 open reading frame 5##AB451283|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AB451415|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##HQ258655|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##BC117208|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##BC117234|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AF080071|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AF006070|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AF135021|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##NM_003798|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##U97067|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AF030233|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AK314677|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AK022926|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AK223230|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AK022834|CTNNAL1|8727|catenin (cadherin-associated protein), alpha-like 1##AF155065|C9orf4|23732|chromosome 9 open reading frame 4##NM_014334|C9orf4|23732|chromosome 9 open reading frame 4##AF153416|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AF153418|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_018424|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##NM_019114|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##AB032179|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B	0.0	
chr9	113531642	113531714	reg1033730.p2	3.863	+	NM_001166280 NM_001166281 NM_005592 AF006464 BC109098 BC109099 EU832778 EU832779 GQ129313	-100562	+	TSC_hg19_v1_chr9_-_113342011 AJ619977 AY243503 AK122605 BC030816 NM_153366	-189614	-	HQ258720 AF305830 BC130549 BC130551 BC144461 BC035743 NM_001003936	-431578	-	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	268734	-	AK298590 TSC_hg19_v1_chr9_-_113801086	269355	-	TSC_hg19_v1_chr9_-_113801481 AK290287	269824	-	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1##AK298590|LPAR1|1902|lysophosphatidic acid receptor 1##AK290287|LPAR1|1902|lysophosphatidic acid receptor 1	0.0	
chr9	134518179	134518267	reg1031952.p1	3.863	+	AK057848 TSC_hg19_v1_chr9_-_134406625 BC091495 BC015547 AK022317 NM_001135954 NM_031432	-111573	-	TSC_hg19_v1_chr9_-_134406578 AF254133 CR457281 CU677347 AF237290 AF125106 AK295471 AK307475	-111676	-	AK315218 TSC_hg19_v1_chr9_+_134378402 AK293529 BC022877	-139788	+	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	66979	-	D21239 NM_005312	94701	-	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	97067	-	AK057848|UCK1|83549|uridine-cytidine kinase 1##BC091495|UCK1|83549|uridine-cytidine kinase 1##BC015547|UCK1|83549|uridine-cytidine kinase 1##AK022317|UCK1|83549|uridine-cytidine kinase 1##NM_001135954|UCK1|83549|uridine-cytidine kinase 1##NM_031432|UCK1|83549|uridine-cytidine kinase 1##AF254133|UCK1|83549|uridine-cytidine kinase 1##CR457281|UCK1|83549|uridine-cytidine kinase 1##AF237290|UCK1|83549|uridine-cytidine kinase 1##AF125106|UCK1|83549|uridine-cytidine kinase 1##AK295471|UCK1|83549|uridine-cytidine kinase 1##AK307475|UCK1|83549|uridine-cytidine kinase 1##AK315218|POMT1|10585|protein-O-mannosyltransferase 1##AK293529|POMT1|10585|protein-O-mannosyltransferase 1##BC022877|POMT1|10585|protein-O-mannosyltransferase 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1	0.0	
chr9	137330395	137330533	reg1037366.p2	3.863	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-112064	+	TSC_hg19_v1_chr9_+_137218317 BC063827 NM_002957	-112149	+	AJ011376 NM_052821 AB464354	-325510	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	203183	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	203346	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	442196	+	BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##BC063827|RXRA|6256|retinoid X receptor, alpha##NM_002957|RXRA|6256|retinoid X receptor, alpha##AJ011376|WDR5|11091|WD repeat domain 5##NM_052821|WDR5|11091|WD repeat domain 5##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##D90279|COL5A1|1289|collagen, type V, alpha 1##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	0.041604	
chrX	64888589	64888769	reg1019638.p4	3.863	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	-1031	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	-1132	+	NM_002444 TSC_hg19_v1_chrX_+_64887520	-1162	+	TSC_hg19_v1_chrX_+_65235302 DQ680071 DQ680072	346612	+	DQ891770 DQ894953 BC010525 AJ132502 AK293215 AK298389 AK075153 AK297050 AK301417 AK075171 NM_001100431 NM_001184830 NM_001184831 NM_007268	371223	-	NM_138737 TSC_hg19_v1_chrX_+_65382512	493796	+	AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##NM_002444|MSN|4478|moesin##DQ891770|VSIG4|11326|V-set and immunoglobulin domain containing 4##DQ894953|VSIG4|11326|V-set and immunoglobulin domain containing 4##BC010525|VSIG4|11326|V-set and immunoglobulin domain containing 4##AJ132502|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK293215|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK298389|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075153|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK297050|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK301417|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075171|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001100431|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184830|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184831|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_007268|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_138737|HEPH|9843|hephaestin	0.0	
chr13	73270876	73270972	reg1032726.p1	3.862	+	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	-829490	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	-830161	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	-830665	-	TSC_hg19_v1_chr13_-_73301768 BC062361 BC013405 BC080523 AK025522 BC125183 NM_001071775	30907	-	EU834129 TSC_hg19_v1_chr13_+_73302063 AK300758 BX648605 NM_024808 AK298608 AK291496 BC056876 BC025367 EU832508 EU832589	31160	+	AB385417 TSC_hg19_v1_chr13_-_73355994 AB001743 AF330044	85063	-	AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##BC062361|MZT1|440145|mitotic spindle organizing protein 1##BC013405|MZT1|440145|mitotic spindle organizing protein 1##BC080523|MZT1|440145|mitotic spindle organizing protein 1##AK025522|MZT1|440145|mitotic spindle organizing protein 1##BC125183|MZT1|440145|mitotic spindle organizing protein 1##NM_001071775|MZT1|440145|mitotic spindle organizing protein 1##EU834129|BORA|79866|bora, aurora kinase A activator##AK300758|BORA|79866|bora, aurora kinase A activator##BX648605|BORA|79866|bora, aurora kinase A activator##NM_024808|BORA|79866|bora, aurora kinase A activator##AK298608|BORA|79866|bora, aurora kinase A activator##AK291496|BORA|79866|bora, aurora kinase A activator##BC056876|BORA|79866|bora, aurora kinase A activator##BC025367|BORA|79866|bora, aurora kinase A activator##EU832508|BORA|79866|bora, aurora kinase A activator##EU832589|BORA|79866|bora, aurora kinase A activator##AB001743|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AF330044|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)	0.998332	CTCF.p2:15:0.998
chr15	75082423	75082532	reg1030686.p1	3.862	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	-7621	+	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	-8052	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-41285	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	22695	+	AK024055 NM_001030005 AB072900 BC018026 AY286501	36513	+	TSC_hg19_v1_chr15_-_75135477 AB528889 CU691158 AK075047 BC056423 AK299380	52976	-	X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like##AK024055|CPLX3|594855|complexin 3##NM_001030005|CPLX3|594855|complexin 3##AB072900|CPLX3|594855|complexin 3##BC018026|CPLX3|594855|complexin 3##AY286501|CPLX3|594855|complexin 3##AK075047|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC056423|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK299380|ULK3|25989|unc-51-like kinase 3 (C. elegans)	0.0	
chr16	83920786	83920966	reg1030598.p2	3.862	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	-79220	+	TSC_hg19_v1_chr16_+_83841582 NM_001537 BX537440 BX648972 AF068754	-79276	+	TSC_hg19_v1_chr16_+_82660641 AK304733 BC012615 AB384879 CU688968 DQ891713 DQ894890	-1260207	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	11893	+	NM_182981 TSC_hg19_v1_chr16_+_83986844 AK290383 AY258068 AY037158 BC020434 BC032476 BC093687 BC113417	66008	+	TSC_hg19_v1_chr16_+_84002230 AY299331 NM_019065 BC131615 AK127376	81336	+	BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##NM_001537|HSBP1|3281|heat shock factor binding protein 1##BX537440|HSBP1|3281|heat shock factor binding protein 1##BX648972|HSBP1|3281|heat shock factor binding protein 1##AF068754|HSBP1|3281|heat shock factor binding protein 1##AK304733|CDH13|1012|cadherin 13, H-cadherin (heart)##BC012615|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ891713|CDH13|1012|cadherin 13, H-cadherin (heart)##DQ894890|CDH13|1012|cadherin 13, H-cadherin (heart)##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase##NM_182981|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK290383|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY258068|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY037158|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC020434|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC032476|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC093687|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC113417|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY299331|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_019065|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##BC131615|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##AK127376|NECAB2|54550|N-terminal EF-hand calcium binding protein 2	0.013619	
chr2	159580788	159580884	reg1032411.p2	3.862	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-267253	+	TSC_hg19_v1_chr2_+_159313419 BC034473	-267401	+	CU677295 BC105928 BC107596 BC107597 AK123220 AK058105 AF458588 BC015395 AK309246 TSC_hg19_v1_chr2_-_159313250 AK308783 AK311042 NM_001171637 NM_138803	-267727	-	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	70999	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	244311	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	562312	-	NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##BC034473|PKP4|8502|plakophilin 4##BC105928|CCDC148|130940|coiled-coil domain containing 148##BC107596|CCDC148|130940|coiled-coil domain containing 148##BC107597|CCDC148|130940|coiled-coil domain containing 148##AK123220|CCDC148|130940|coiled-coil domain containing 148##AK058105|CCDC148|130940|coiled-coil domain containing 148##AF458588|CCDC148|130940|coiled-coil domain containing 148##BC015395|CCDC148|130940|coiled-coil domain containing 148##AK309246|CCDC148|130940|coiled-coil domain containing 148##AK308783|CCDC148|130940|coiled-coil domain containing 148##AK311042|CCDC148|130940|coiled-coil domain containing 148##NM_001171637|CCDC148|130940|coiled-coil domain containing 148##NM_138803|CCDC148|130940|coiled-coil domain containing 148##AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1	0.743995	CTCF.p2:52:0.744
chr2	62681078	62681184	reg1046217.p2	3.862	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-257865	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-548302	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-565345	-	BC047439 AK091902 AX747245 NM_198276	52408	-	AK292545 NM_001142615	219854	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	251835	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr5	10684834	10685014	reg1033066.p1	3.862	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-120482	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-242772	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-242921	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	76335	-	TSC_hg19_v1_chr5_-_10761341 BC002726	76418	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	76475	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.062547	
chr5	116040633	116040767	reg1026971.p2	3.862	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-130186	-	TSC_hg19_v1_chr5_+_115898220 D28352	-142476	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-619979	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2283538	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2366111	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2366465	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr6	166849090	166849208	reg1032740.p2	3.862	+	TSC_hg19_v1_chr6_-_166796469 AF125101 AF151887 NM_016098	-52639	-	CU674406 TSC_hg19_v1_chr6_-_166796429 BC000810 AK312201 AK310934	-52740	-	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	-93115	-	DQ891864 DQ895053 L07598 TSC_hg19_v1_chr6_-_167040629	191428	-	TSC_hg19_v1_chr6_-_167040662 X85106	191520	-	TSC_hg19_v1_chr6_-_167040713 BC002363 NM_021135	191569	-	AF125101|BRP44L|51660|brain protein 44-like##AF151887|BRP44L|51660|brain protein 44-like##NM_016098|BRP44L|51660|brain protein 44-like##BC000810|BRP44L|51660|brain protein 44-like##AK312201|BRP44L|51660|brain protein 44-like##AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1##DQ891864|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##DQ895053|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##L07598|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##X85106|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	0.0	
chr8	106952351	106952439	reg1032349.p2	3.862	+	AF119334 BC109222 BC109223 NM_012082	-621249	+	TSC_hg19_v1_chr8_-_105601235 AK299374 NM_001135703 NM_013437	-1351148	-	CU689274 DQ892323 DQ895525 BC032109 AK289752 AF166350 TSC_hg19_v1_chr8_-_105601191 CR749434 AF064841	-1351220	-	TSC_hg19_v1_chr8_+_107282433 NM_001198533 NM_018002 AK124441 BC040619	330028	+	AK296561 NM_001198532	507756	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	717593	+	AF119334|ZFPM2|23414|zinc finger protein, multitype 2##BC109222|ZFPM2|23414|zinc finger protein, multitype 2##BC109223|ZFPM2|23414|zinc finger protein, multitype 2##NM_012082|ZFPM2|23414|zinc finger protein, multitype 2##AK299374|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001135703|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_013437|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ892323|LRP12|29967|low density lipoprotein receptor-related protein 12##DQ895525|LRP12|29967|low density lipoprotein receptor-related protein 12##BC032109|LRP12|29967|low density lipoprotein receptor-related protein 12##AK289752|LRP12|29967|low density lipoprotein receptor-related protein 12##AF166350|LRP12|29967|low density lipoprotein receptor-related protein 12##CR749434|LRP12|29967|low density lipoprotein receptor-related protein 12##AF064841|LRP12|29967|low density lipoprotein receptor-related protein 12##NM_001198533|OXR1|55074|oxidation resistance 1##NM_018002|OXR1|55074|oxidation resistance 1##AK124441|OXR1|55074|oxidation resistance 1##BC040619|OXR1|55074|oxidation resistance 1##AK296561|OXR1|55074|oxidation resistance 1##NM_001198532|OXR1|55074|oxidation resistance 1##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1	0.5487	CTCF.p2:-8:0.549
chr9	1490762	1490899	reg1038300.p1	3.862	+	AF130729 NM_181872	-440221	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-440460	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-440486	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	524466	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	1130977	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	1131244	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.0	
chr11	128342096	128342209	reg1035862.p1	3.861	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1468847	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1471427	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1471492	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	49811	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	49982	-	BX640634 NM_001143820	115300	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.0	
chr12	89934947	89935014	reg1040347.p2	3.861	+	AK297677 NM_001199781 NM_001199782 NM_172240	-14942	-	CU693124 TSC_hg19_v1_chr12_-_89919778 BX647258 AK074772 AK295596 BC026080 EF011619	-15220	-	TSC_hg19_v1_chr12_-_89919208 AK123106 NM_001199777	-15718	-	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	114871	-	TSC_hg19_v1_chr12_+_90102640 BC040326	167707	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	168565	+	AK297677|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199781|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199782|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_172240|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BX647258|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##AK074772|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK295596|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BC026080|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##EF011619|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK123106|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##NM_001199777|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC040326|LOC338758|338758|uncharacterized LOC338758##BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758	0.0	
chr13	28631369	28631467	reg1034543.p1	3.861	+	NM_001105577	-68645	-	TSC_hg19_v1_chr13_-_28543453 Y13709	-87955	-	TSC_hg19_v1_chr13_-_28543325 BC014461 NM_001265	-88110	-	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	43269	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	81248	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	437826	-	NM_001105577|PRHOXNB|646625|parahox cluster neighbor##Y13709|CDX2|1045|caudal type homeobox 2##BC014461|CDX2|1045|caudal type homeobox 2##NM_001265|CDX2|1045|caudal type homeobox 2##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	0.0	
chr19	597367	597545	reg1028234.p1	3.861	+	TSC_hg19_v1_chr19_+_589888 AJ012582 NM_001194 AF065164 DQ854815 AB527443	-7543	+	TSC_hg19_v1_chr19_+_572595 X64364 AY358113 BC009040 AB085790 AK296858 AK297880 D28441 D45131 AB072923 L10240 AB091680 M87879 AB463434	-24794	+	TSC_hg19_v1_chr19_+_572571 AF548371	-24885	+	TSC_hg19_v1_chr19_-_633520 AK307525 BC030829	36042	-	TSC_hg19_v1_chr19_-_633538 AK225723 AK225865 BC098387 U75370	36087	-	TSC_hg19_v1_chr19_-_633564 BC070057 NM_005035	36144	-	AJ012582|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##NM_001194|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##AF065164|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##DQ854815|HCN2|610|hyperpolarization activated cyclic nucleotide-gated potassium channel 2##X64364|BSG|682|basigin (Ok blood group)##AY358113|BSG|682|basigin (Ok blood group)##BC009040|BSG|682|basigin (Ok blood group)##AB085790|BSG|682|basigin (Ok blood group)##AK296858|BSG|682|basigin (Ok blood group)##AK297880|BSG|682|basigin (Ok blood group)##D28441|BSG|682|basigin (Ok blood group)##D45131|BSG|682|basigin (Ok blood group)##AB072923|BSG|682|basigin (Ok blood group)##L10240|BSG|682|basigin (Ok blood group)##AB091680|BSG|682|basigin (Ok blood group)##M87879|BSG|682|basigin (Ok blood group)##AF548371|BSG|682|basigin (Ok blood group)##AK307525|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC030829|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##AK225723|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##AK225865|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC098387|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##U75370|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##BC070057|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)##NM_005035|POLRMT|5442|polymerase (RNA) mitochondrial (DNA directed)	0.0	
chr2	89537409	89537515	reg1040370.p2	3.861	+	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	-24229	-	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-94873	-	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	-245049	-	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	82391	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	540292	+	TSC_hg19_v1_chr2_+_90211706 Z69013	674256	+	BC070336|IGKC|3514|immunoglobulin kappa constant##BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC070334|IGKC|3514|immunoglobulin kappa constant	0.0	
chr4	40229018	40229185	reg1033175.p1	3.861	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-30460	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-170569	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-249508	-	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	108344	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	287483	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	288857	-	NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47	0.0	
chr8	119964159	119964254	reg1030925.p2	3.861	+	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	-329999	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	-330081	-	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	-840245	-	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	14	-	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	115263	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	256433	+	NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)	0.0	
chr8	145719767	145719833	reg1045047.p1	3.861	+	AK090471 TSC_hg19_v1_chr8_+_145703480	-16339	+	AF076292 NM_003923	-18083	-	AB463647 TSC_hg19_v1_chr8_-_145701232 BC051376 BC065377	-18612	-	BC053506 NM_032902 BC049841	2352	+	AK225562 NM_005309 AK298488 AK303779 TSC_hg19_v1_chr8_+_145729525	9697	+	TSC_hg19_v1_chr8_+_145734481 BC011982 NM_138431	14698	+	AK090471|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A##AF076292|FOXH1|8928|forkhead box H1##NM_003923|FOXH1|8928|forkhead box H1##BC051376|FOXH1|8928|forkhead box H1##BC065377|FOXH1|8928|forkhead box H1##BC053506|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A##NM_032902|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A##BC049841|PPP1R16A|84988|protein phosphatase 1, regulatory subunit 16A##AK225562|GPT|2875|glutamic-pyruvate transaminase (alanine aminotransferase)##NM_005309|GPT|2875|glutamic-pyruvate transaminase (alanine aminotransferase)##AK298488|GPT|2875|glutamic-pyruvate transaminase (alanine aminotransferase)##AK303779|GPT|2875|glutamic-pyruvate transaminase (alanine aminotransferase)##BC011982|MFSD3|113655|major facilitator superfamily domain containing 3##NM_138431|MFSD3|113655|major facilitator superfamily domain containing 3	0.0	
chrX	109098828	109098947	reg1029741.p1	3.861	+	TSC_hg19_v1_chrX_-_108976528 AB061713 AK292070 AF030555 NM_004458 NM_022977	-122323	-	TSC_hg19_v1_chrX_-_108976464 Y12777 Y13058 AB061714 BC034959 AK307566 AK294915	-122408	-	DQ891287 DQ894471 DQ896649 DQ896656 DQ896659 DQ896664 EF535525 BC035330 AJ012743 NM_012282 AK223306 AK314923 DQ192294 TSC_hg19_v1_chrX_-_108868398	-230563	-	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	146983	+	TSC_hg19_v1_chrX_+_109246341 NM_032227 AK026332	147453	+	TSC_hg19_v1_chrX_+_109246360 BC085605	147468	+	AB061713|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK292070|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AF030555|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_004458|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_022977|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y12777|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y13058|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061714|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##BC034959|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK307566|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK294915|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##DQ891287|KCNE1L|23630|KCNE1-like##DQ894471|KCNE1L|23630|KCNE1-like##DQ896649|KCNE1L|23630|KCNE1-like##DQ896656|KCNE1L|23630|KCNE1-like##DQ896659|KCNE1L|23630|KCNE1-like##DQ896664|KCNE1L|23630|KCNE1-like##EF535525|KCNE1L|23630|KCNE1-like##BC035330|KCNE1L|23630|KCNE1-like##AJ012743|KCNE1L|23630|KCNE1-like##NM_012282|KCNE1L|23630|KCNE1-like##AK223306|KCNE1L|23630|KCNE1-like##AK314923|KCNE1L|23630|KCNE1-like##DQ192294|KCNE1L|23630|KCNE1-like##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164##NM_032227|TMEM164|84187|transmembrane protein 164##AK026332|TMEM164|84187|transmembrane protein 164##BC085605|TMEM164|84187|transmembrane protein 164	0.0	
chr11	93517967	93518103	reg1036724.p2	3.860	+	AF117657 TSC_hg19_v1_chr11_+_93517488 AK023209 CU676822 AB463860	-454	+	AF105421 TSC_hg19_v1_chr11_+_93517475	-562	+	TSC_hg19_v1_chr11_+_93517458 BC021101	-576	+	NM_001144871	65632	-	NM_001098672	236342	+	TSC_hg19_v1_chr11_+_93862126 BC016931 NM_015368 AF398509 AK313074	344060	+	AF117657|MED17|9440|mediator complex subunit 17##AK023209|MED17|9440|mediator complex subunit 17##AF105421|MED17|9440|mediator complex subunit 17##BC021101|MED17|9440|mediator complex subunit 17##NM_001144871|VSTM5|387804|V-set and transmembrane domain containing 5##NM_001098672|HEPHL1|341208|hephaestin-like 1##BC016931|PANX1|24145|pannexin 1##NM_015368|PANX1|24145|pannexin 1##AF398509|PANX1|24145|pannexin 1##AK313074|PANX1|24145|pannexin 1	0.0	
chr13	20439010	20439144	reg1036988.p1	3.860	+	TSC_hg19_v1_chr13_-_20437790 NM_001039649 NM_001039650 NM_001142684	-1269	-	AK312724 BC007048 AJ133352 AJ133353 AJ133354 AJ133355 TSC_hg19_v1_chr13_-_20437745	-1397	-	TSC_hg19_v1_chr13_-_20357160 NM_001042414	-81933	-	TSC_hg19_v1_chr13_+_20532834 BC036372 NM_003453 NM_197968 AL136621 NM_001190964 Y13472	93740	+	TSC_hg19_v1_chr13_+_20532881 AK226118 AK289741	93807	+	TSC_hg19_v1_chr13_+_20532911 AJ224901 BX647944 NM_001190965	93888	+	NM_001039649|ZMYM5|9205|zinc finger, MYM-type 5##NM_001039650|ZMYM5|9205|zinc finger, MYM-type 5##NM_001142684|ZMYM5|9205|zinc finger, MYM-type 5##AK312724|ZMYM5|9205|zinc finger, MYM-type 5##BC007048|ZMYM5|9205|zinc finger, MYM-type 5##AJ133352|ZMYM5|9205|zinc finger, MYM-type 5##AJ133353|ZMYM5|9205|zinc finger, MYM-type 5##AJ133354|ZMYM5|9205|zinc finger, MYM-type 5##AJ133355|ZMYM5|9205|zinc finger, MYM-type 5##NM_001042414|PSPC1|55269|paraspeckle component 1##BC036372|ZMYM2|7750|zinc finger, MYM-type 2##NM_003453|ZMYM2|7750|zinc finger, MYM-type 2##NM_197968|ZMYM2|7750|zinc finger, MYM-type 2##AL136621|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190964|ZMYM2|7750|zinc finger, MYM-type 2##Y13472|ZMYM2|7750|zinc finger, MYM-type 2##AK226118|ZMYM2|7750|zinc finger, MYM-type 2##AK289741|ZMYM2|7750|zinc finger, MYM-type 2##AJ224901|ZMYM2|7750|zinc finger, MYM-type 2##BX647944|ZMYM2|7750|zinc finger, MYM-type 2##NM_001190965|ZMYM2|7750|zinc finger, MYM-type 2	0.0	
chr15	92935001	92935113	reg1038226.p1	3.860	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-537490	+	TSC_hg19_v1_chr15_+_92397119 BC000585 AK290872 AF187816 CU674284 DQ891954 DQ895140	-537960	+	TSC_hg19_v1_chr15_+_92396937 NM_001145044 NM_013272 AB031050 AF205074	-538114	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	2142	+	AK057393 NM_153040	79849	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	263822	-	AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC000585|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK290872|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF187816|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ891954|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##DQ895140|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_001145044|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_013272|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AB031050|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AF205074|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B	0.995129	CTCF.p2:-4:0.995
chr15	94518437	94518525	reg1037968.p1	3.860	+	AB463222 AM392685 BC146682 AK074980 BC140838 BC151132 AL136826 TSC_hg19_v1_chr15_-_93632430 AK074910 AK291365 NM_020211	-886128	-	NM_001166287	-886730	-	AK299363 NM_001166283	-901328	-	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	256377	+	NM_001159643 NM_018349 AY656717 BC131527	322980	+	NM_001159644 BC025708 BC111024 AK002037	380828	+	AM392685|RGMA|56963|RGM domain family, member A##BC146682|RGMA|56963|RGM domain family, member A##AK074980|RGMA|56963|RGM domain family, member A##BC140838|RGMA|56963|RGM domain family, member A##BC151132|RGMA|56963|RGM domain family, member A##AL136826|RGMA|56963|RGM domain family, member A##AK074910|RGMA|56963|RGM domain family, member A##NM_020211|RGMA|56963|RGM domain family, member A##NM_001166287|RGMA|56963|RGM domain family, member A##AK299363|RGMA|56963|RGM domain family, member A##NM_001166283|RGMA|56963|RGM domain family, member A##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2	0.671003	CTCF.p2:19:0.671
chr16	1662863	1662937	reg1035880.p1	3.860	+	TSC_hg19_v1_chr16_-_1662054 NM_014714	-862	-	TSC_hg19_v1_chr16_-_1660720 AB011162 AK299035 AK299115	-2208	-	BC105785 AY358178 NM_024600	-78705	+	NM_020825	1740	+	AK309909 AK296998 NM_144570 TSC_hg19_v1_chr16_+_1728279 AK023154	65368	+	BC060853 TSC_hg19_v1_chr16_+_1728289	65386	+	NM_014714|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##AB011162|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##AK299035|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##AK299115|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##BC105785|TMEM204|79652|transmembrane protein 204##AY358178|TMEM204|79652|transmembrane protein 204##NM_024600|TMEM204|79652|transmembrane protein 204##NM_020825|CRAMP1L|57585|Crm, cramped-like (Drosophila)##AK309909|HN1L|90861|hematological and neurological expressed 1-like##AK296998|HN1L|90861|hematological and neurological expressed 1-like##NM_144570|HN1L|90861|hematological and neurological expressed 1-like##AK023154|HN1L|90861|hematological and neurological expressed 1-like##BC060853|HN1L|90861|hematological and neurological expressed 1-like	0.0	
chr2	19247371	19247520	reg1032636.p2	3.860	+	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	-476635	-	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	-505529	-	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	-1187491	+	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	310934	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	821190	+	TSC_hg19_v1_chr2_-_20101456 BC050088	853983	-	AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946	0.0	
chr22	20962553	20962619	reg1043282.p1	3.860	+	TSC_hg19_v1_chr22_+_20918811 U80745	-43762	+	BC017110 TSC_hg19_v1_chr22_+_20909388	-53279	+	AB463109 CU013137 CU013425 AF328769 TSC_hg19_v1_chr22_+_20861965	-100622	+	L36151 NM_002650	126368	-	TSC_hg19_v1_chr22_+_21128411 NM_000185 AK314200 AK225292 BC035028	165810	+	AB384703 TSC_hg19_v1_chr22_-_21213029 AK302424	250444	-	U80745|MED15|51586|mediator complex subunit 15##BC017110|MED15|51586|mediator complex subunit 15##CU013137|MED15|51586|mediator complex subunit 15##CU013425|MED15|51586|mediator complex subunit 15##AF328769|MED15|51586|mediator complex subunit 15##L36151|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_002650|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_000185|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK314200|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK225292|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##BC035028|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK302424|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha	0.0	
chr2	99081341	99081480	reg1024686.p1	3.860	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-20052	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-118505	+	DQ426863 NM_001079878 NM_001298 DQ067460	-118777	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	143532	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	143640	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	143660	+	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)	0.0	
chr3	101592031	101592098	reg1042388.p1	3.860	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-23690	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-45104	+	AK289689 NM_001134456	-93779	+	AY090780 NM_175056 BC143817	561803	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	3493516	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	3493758	+	AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule	0.0	
chr5	89717129	89717247	reg1042385.p1	3.860	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	-11649	-	AL833268 AL833274 NM_001131005 NM_001193347	-1517294	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1531924	+	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	52994	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	53390	-	NM_006467 AK295434 U93868	53514	+	BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)	0.451801	CTCF.p2:-1:0.452
chr6	111003465	111003646	reg1001548.p1	3.860	+	TSC_hg19_v1_chr6_-_110797837 BC047565 NM_033125	-205692	-	TSC_hg19_v1_chr6_-_110797817 AK304546	-205737	-	BC012014 AF268892 AY145502 BC037247 TSC_hg19_v1_chr6_-_110797794	-205767	-	AK304351 TSC_hg19_v1_chr6_+_111135843	132278	+	BC047513 TSC_hg19_v1_chr6_-_111136246	132663	-	AJ420571 TSC_hg19_v1_chr6_-_111136300	132744	-	BC047565|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##NM_033125|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304546|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC012014|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AF268892|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AY145502|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC037247|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304351|AMD1|262|adenosylmethionine decarboxylase 1##BC047513|CDK19|23097|cyclin-dependent kinase 19##AJ420571|CDK19|23097|cyclin-dependent kinase 19	0.0	
chr8	91658604	91658713	reg1034448.p2	3.860	+	TSC_hg19_v1_chr8_-_91657970 AY147881 NM_001008495 NM_001146273	-643	-	AK300583 AK123958 AL834364 TSC_hg19_v1_chr8_-_91657856	-860	-	AB529128 X06661 BC006478 AK054881 AK312491 BC020864 NM_004929	-563643	-	AF414126 TSC_hg19_v1_chr8_+_91803956 NM_022351 AK095533 BC068448 AY224210	145287	+	TSC_hg19_v1_chr8_-_91997476 NM_001190972	338804	-	TSC_hg19_v1_chr8_-_92053091 AX775961 BC033892 AK313783 NM_018710	394464	-	AY147881|TMEM64|169200|transmembrane protein 64##NM_001008495|TMEM64|169200|transmembrane protein 64##NM_001146273|TMEM64|169200|transmembrane protein 64##AK300583|TMEM64|169200|transmembrane protein 64##AK123958|TMEM64|169200|transmembrane protein 64##AL834364|TMEM64|169200|transmembrane protein 64##X06661|CALB1|793|calbindin 1, 28kDa##BC006478|CALB1|793|calbindin 1, 28kDa##AK054881|CALB1|793|calbindin 1, 28kDa##AK312491|CALB1|793|calbindin 1, 28kDa##BC020864|CALB1|793|calbindin 1, 28kDa##NM_004929|CALB1|793|calbindin 1, 28kDa##AF414126|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##NM_022351|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AK095533|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##BC068448|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##AY224210|NECAB1|64168|N-terminal EF-hand calcium binding protein 1##NM_001190972|LOC100127983|100127983|uncharacterized LOC100127983##AX775961|TMEM55A|55529|transmembrane protein 55A##BC033892|TMEM55A|55529|transmembrane protein 55A##AK313783|TMEM55A|55529|transmembrane protein 55A##NM_018710|TMEM55A|55529|transmembrane protein 55A	0.0	
chr9	37210099	37210238	reg1037466.p2	3.860	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-89585	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-89660	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-89682	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	212538	+	BC010007 TSC_hg19_v1_chr9_-_37465267	255092	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	255227	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.943752	CTCF.p2:-36:0.944
chr1	145715645	145715761	reg1034387.p1	3.859	+	AF060981 BC014465 NM_007053 AK128370	-116	-	AL079314 TSC_hg19_v1_chr1_+_145663283	-52484	+	TSC_hg19_v1_chr1_+_145611124 AF419857 NM_014455 AK290749 AF542552 BC054049 BC064903 CU691082 EU446627 EU446791 GQ129333 GQ129334	-104523	+	NM_001201325 NM_001201326 NM_002614 TSC_hg19_v1_chr1_+_145727703	11981	+	TSC_hg19_v1_chr1_+_145727712 AK313100 AK298269 BC006496 BC006518 AF012281	12016	+	BT006679 DQ890650 DQ893830 AB528816 TSC_hg19_v1_chr1_-_145827047 BC003187 AK316371 BC146880 AF132947 U78723 BC067816 AB097024 AB097025 AK223223 AK299995 AK302266 AY358966 AK021758 AK297145 NM_001097612 NM_001097613	111313	-	AF060981|CD160|11126|CD160 molecule##BC014465|CD160|11126|CD160 molecule##NM_007053|CD160|11126|CD160 molecule##AK128370|CD160|11126|CD160 molecule##AL079314|RNF115|27246|ring finger protein 115##AF419857|RNF115|27246|ring finger protein 115##NM_014455|RNF115|27246|ring finger protein 115##AK290749|RNF115|27246|ring finger protein 115##AF542552|RNF115|27246|ring finger protein 115##BC054049|RNF115|27246|ring finger protein 115##BC064903|RNF115|27246|ring finger protein 115##EU446627|RNF115|27246|ring finger protein 115##EU446791|RNF115|27246|ring finger protein 115##GQ129333|RNF115|27246|ring finger protein 115##GQ129334|RNF115|27246|ring finger protein 115##NM_001201325|PDZK1|5174|PDZ domain containing 1##NM_001201326|PDZK1|5174|PDZ domain containing 1##NM_002614|PDZK1|5174|PDZ domain containing 1##AK313100|PDZK1|5174|PDZ domain containing 1##AK298269|PDZK1|5174|PDZ domain containing 1##BC006496|PDZK1|5174|PDZ domain containing 1##BC006518|PDZK1|5174|PDZ domain containing 1##AF012281|PDZK1|5174|PDZ domain containing 1##BT006679|GPR89A|653519|G protein-coupled receptor 89A##DQ890650|GPR89B|51463|G protein-coupled receptor 89B##DQ893830|GPR89A|653519|G protein-coupled receptor 89A##BC003187|GPR89A|653519|G protein-coupled receptor 89A##AK316371|GPR89A|653519|G protein-coupled receptor 89A##BC146880|GPR89A|653519|G protein-coupled receptor 89A##AF132947|GPR89A|653519|G protein-coupled receptor 89A##U78723|GPR89B|51463|G protein-coupled receptor 89B##BC067816|GPR89A|653519|G protein-coupled receptor 89A##AB097024|GPR89A|653519|G protein-coupled receptor 89A##AB097025|GPR89A|653519|G protein-coupled receptor 89A##AK223223|GPR89A|653519|G protein-coupled receptor 89A##AK299995|GPR89A|653519|G protein-coupled receptor 89A##AK302266|GPR89B|51463|G protein-coupled receptor 89B##AY358966|GPR89A|653519|G protein-coupled receptor 89A##AK021758|GPR89A|653519|G protein-coupled receptor 89A##AK297145|GPR89A|653519|G protein-coupled receptor 89A##NM_001097612|GPR89A|653519|G protein-coupled receptor 89A##NM_001097613|GPR89A|653519|G protein-coupled receptor 89A	0.0	
chr12	111115102	111115240	reg1032976.p1	3.859	+	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	-63246	+	AK124744 TSC_hg19_v1_chr12_-_111021124	-94045	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	-94101	-	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	11787	-	AK293543 NM_001040107	12428	-	L07395 AK297882 AB590512 EU831993 EU832086 TSC_hg19_v1_chr12_-_111180593	65375	-	AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1##L07395|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK297882|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU831993|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU832086|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme	0.0	
chr12	25589229	25589334	reg1005936.p1	3.859	+	TSC_hg19_v1_chr12_-_25403864 AK292510 NM_004985 NM_033360 BC029545 M54968	-185340	-	TSC_hg19_v1_chr12_-_25403822 BC013572	-185466	-	AK094491 TSC_hg19_v1_chr12_+_25348215 BC100276 BC071769	-241075	+	AK093323 AX748055 NM_152590 BC037957 AK310411 AK302292 NM_001145728 NM_001145729	116915	-	AK296816 NM_001145727	212206	-	TSC_hg19_v1_chr12_+_26111964 NM_001164748 NM_007211 BC030021 AB093206 AY665468 AY665469 AY665470 AY665471	522720	+	AK292510|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##NM_004985|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##NM_033360|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC029545|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##M54968|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC013572|KRAS|3845|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog##BC100276|LYRM5|144363|LYR motif containing 5##BC071769|LYRM5|144363|LYR motif containing 5##AK093323|IFLTD1|160492|intermediate filament tail domain containing 1##NM_152590|IFLTD1|160492|intermediate filament tail domain containing 1##BC037957|IFLTD1|160492|intermediate filament tail domain containing 1##AK310411|IFLTD1|160492|intermediate filament tail domain containing 1##AK302292|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145728|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145729|IFLTD1|160492|intermediate filament tail domain containing 1##AK296816|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001145727|IFLTD1|160492|intermediate filament tail domain containing 1##NM_001164748|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##NM_007211|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##BC030021|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AB093206|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665468|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665469|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665470|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8##AY665471|RASSF8|11228|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	0.0	
chr15	74329327	74329411	reg1032110.p2	3.859	+	TSC_hg19_v1_chr15_+_74287153 AB384942 CU674024 BT009911	-42213	+	TSC_hg19_v1_chr15_+_74287135 M79462 M79463 M79464 M80185 AB208950	-42230	+	TSC_hg19_v1_chr15_+_74287128 AK300256 AK300951	-42250	+	BC131515 AK292574 AF263742 NM_001038640	45511	-	AK092302 AX747465 AB040898 BC152429 NM_001130136	92337	+	AK309388 NM_001130137 BC028042	92623	+	BT009911|PML|5371|promyelocytic leukemia##M79462|PML|5371|promyelocytic leukemia##M79463|PML|5371|promyelocytic leukemia##M79464|PML|5371|promyelocytic leukemia##M80185|PML|5371|promyelocytic leukemia##AB208950|PML|5371|promyelocytic leukemia##AK300256|PML|5371|promyelocytic leukemia##BC131515|GOLGA6A|342096|golgin A6 family, member A##AK292574|GOLGA6A|342096|golgin A6 family, member A##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001038640|GOLGA6A|342096|golgin A6 family, member A##AK092302|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##AB040898|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC152429|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130136|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##NM_001130137|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2##BC028042|ISLR2|57611|immunoglobulin superfamily containing leucine-rich repeat 2	0.982747	CTCF.p2:31:0.983
chr15	75146701	75146882	reg1031750.p2	3.859	+	TSC_hg19_v1_chr15_-_75135524 BC157884 NM_001099436 AL117482	-11186	-	TSC_hg19_v1_chr15_-_75135498 AK293181 BC036117	-11291	-	BC048289 TSC_hg19_v1_chr15_-_75135479	-11312	-	CR456800 AF005038 TSC_hg19_v1_chr15_-_75165693 AK315516 BC001376 BC004385 NM_005697 AK096794 AK096376 AK291884	18864	-	TSC_hg19_v1_chr15_+_75182388 AK294030 AK301370 AK302354 BX648475 AF504648 AK225149 BC046357 AK292374 BC017351 NM_002435 X76057 CU692334 AB529030	35601	+	AK025373 TSC_hg19_v1_chr15_-_75194610	47785	-	BC157884|ULK3|25989|unc-51-like kinase 3 (C. elegans)##NM_001099436|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AL117482|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK293181|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC036117|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC048289|ULK3|25989|unc-51-like kinase 3 (C. elegans)##CR456800|SCAMP2|10066|secretory carrier membrane protein 2##AF005038|SCAMP2|10066|secretory carrier membrane protein 2##AK315516|SCAMP2|10066|secretory carrier membrane protein 2##BC001376|SCAMP2|10066|secretory carrier membrane protein 2##BC004385|SCAMP2|10066|secretory carrier membrane protein 2##NM_005697|SCAMP2|10066|secretory carrier membrane protein 2##AK096794|SCAMP2|10066|secretory carrier membrane protein 2##AK096376|SCAMP2|10066|secretory carrier membrane protein 2##AK291884|SCAMP2|10066|secretory carrier membrane protein 2##AK294030|MPI|4351|mannose phosphate isomerase##AK301370|MPI|4351|mannose phosphate isomerase##AK302354|MPI|4351|mannose phosphate isomerase##BX648475|MPI|4351|mannose phosphate isomerase##AF504648|MPI|4351|mannose phosphate isomerase##AK225149|MPI|4351|mannose phosphate isomerase##BC046357|MPI|4351|mannose phosphate isomerase##AK292374|MPI|4351|mannose phosphate isomerase##BC017351|MPI|4351|mannose phosphate isomerase##NM_002435|MPI|4351|mannose phosphate isomerase##X76057|MPI|4351|mannose phosphate isomerase##AK025373|C15orf17|57184|chromosome 15 open reading frame 17	0.0	
chr17	46956162	46956342	reg1000412.p2	3.859	+	NM_005831 AK293329 TSC_hg19_v1_chr17_+_46908406 AK293137 AK303313 AK304024 AK310648 AK314796 U22897 AK222666 AK223227 AK298177 BC004130	-47862	+	AK097392 AK302952 BC041368 AL834151 NM_001130918	-61828	-	CU689652 BC033563 NM_173623 AK310321	-84607	-	AK095669 TSC_hg19_v1_chr17_+_46970178 NM_001002027 NM_005175 AL080089 AK311848 D13118	13933	+	TSC_hg19_v1_chr17_+_46985768 NM_023079 AK296865	29493	+	AK130303 TSC_hg19_v1_chr17_+_46985840 AK024030 AK122770	29582	+	NM_005831|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293329|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK293137|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK303313|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK304024|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK314796|CALCOCO2|10241|calcium binding and coiled-coil domain 2##U22897|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK222666|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK223227|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK298177|CALCOCO2|10241|calcium binding and coiled-coil domain 2##BC004130|CALCOCO2|10241|calcium binding and coiled-coil domain 2##AK097392|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK302952|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC041368|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AL834151|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_001130918|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##BC033563|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##NM_173623|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK310321|TTLL6|284076|tubulin tyrosine ligase-like family, member 6##AK095669|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_001002027|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_005175|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AL080089|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##AK311848|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##D13118|ATP5G1|516|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9)##NM_023079|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK296865|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK130303|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK024030|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK122770|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z	0.0	
chr1	9689840	9689956	reg1036580.p2	3.859	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-40942	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-90262	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	-90366	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	21906	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	193997	-	TSC_hg19_v1_chr1_-_9884023 AK304813	194123	-	BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1	0.0	
chr20	50034825	50034913	reg1037429.p2	3.859	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	-395212	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-459501	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-459806	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	124270	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	124406	-	EU887574 EU887577 NM_001136021	144298	-	BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.01811	
chr2	46769301	46769467	reg1012984.p2	3.859	+	BC034808 NM_080653	-22289	-	NM_001145051	-62681	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	-244409	+	TSC_hg19_v1_chr2_+_46769874 NM_012249 AK095329	465	+	TSC_hg19_v1_chr2_+_46769905 BC056154 BC070485 BC065291 BC093805 BC101806 AF498976 M31470 AB528045	654	+	BC010864 D13435 TSC_hg19_v1_chr2_-_46844167 BC039303	74778	-	BC034808|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_080653|ATP6V1E2|90423|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_012249|RHOQ|23433|ras homolog gene family, member Q##AK095329|RHOQ|23433|ras homolog gene family, member Q##BC056154|RHOQ|23433|ras homolog gene family, member Q##BC070485|RHOQ|23433|ras homolog gene family, member Q##BC065291|RHOQ|23433|ras homolog gene family, member Q##BC093805|RHOQ|23433|ras homolog gene family, member Q##BC101806|RHOQ|23433|ras homolog gene family, member Q##AF498976|RHOQ|23433|ras homolog gene family, member Q##M31470|RHOQ|23433|ras homolog gene family, member Q##D13435|PIGF|5281|phosphatidylinositol glycan anchor biosynthesis, class F	0.0	
chr3	135790222	135790324	reg1032146.p1	3.859	+	NM_181897 AK316258 L12146	-48655	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	-105653	+	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	-105742	+	AK302491 NM_001145417	123019	-	TSC_hg19_v1_chr3_-_135914658 AK091956 NM_018133	124408	-	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	178891	+	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK302491|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_001145417|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##AK091956|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_018133|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide	0.786194	CTCF.p2:17:0.786
chr4	129784453	129784590	reg1004233.p3	3.859	+	TSC_hg19_v1_chr4_+_129732427 BC032376	-52068	+	TSC_hg19_v1_chr4_+_129730875 NM_024900 NM_199320 AK027620 AF520952 AK304815 AK127326	-53651	+	AK131272 NM_006320	-574538	-	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	230069	-	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	230346	+	NM_001099783	232760	+	BC032376|PHF17|79960|PHD finger protein 17##NM_024900|PHF17|79960|PHD finger protein 17##NM_199320|PHF17|79960|PHD finger protein 17##AK027620|PHF17|79960|PHD finger protein 17##AF520952|PHF17|79960|PHD finger protein 17##AK304815|PHF17|79960|PHD finger protein 17##AK127326|PHF17|79960|PHD finger protein 17##AK131272|PGRMC2|10424|progesterone receptor membrane component 2##NM_006320|PGRMC2|10424|progesterone receptor membrane component 2##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33	0.0	
chr4	83819528	83819628	reg1036872.p1	3.859	+	TSC_hg19_v1_chr4_-_83812377 NM_001077206 NM_001077207 NM_001077208 NM_016211 NM_014933	-7183	-	TSC_hg19_v1_chr4_-_83812338 BC039834	-7225	-	NM_001191049 TSC_hg19_v1_chr4_-_83812336 BC047883	-7243	-	BC063702 BC045722 TSC_hg19_v1_chr4_-_83821699 AB020712 BC020725	2106	-	TSC_hg19_v1_chr4_+_83821863 NM_024672 AK091412 AX746965 BC131722	2331	+	BC109278 BC109277 BX537919 TSC_hg19_v1_chr4_-_83931937 AK294256	112333	-	NM_001077206|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##NM_001077207|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##NM_001077208|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##NM_016211|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##NM_014933|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC039834|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##NM_001191049|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC047883|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC063702|LOC100499177|100499177|uncharacterized LOC100499177##BC045722|LOC100499177|100499177|uncharacterized LOC100499177##AB020712|SEC31A|22872|SEC31 homolog A (S. cerevisiae)##BC020725|LOC100499177|100499177|uncharacterized LOC100499177##NM_024672|THAP9|79725|THAP domain containing 9##AK091412|THAP9|79725|THAP domain containing 9##BC131722|THAP9|79725|THAP domain containing 9##BC109278|LIN54|132660|lin-54 homolog (C. elegans)##BC109277|LIN54|132660|lin-54 homolog (C. elegans)##BX537919|LIN54|132660|lin-54 homolog (C. elegans)##AK294256|LIN54|132660|lin-54 homolog (C. elegans)	0.711812	CTCF.p2:2:0.712
chr5	145081087	145081202	reg1036257.p1	3.859	+	AK292477 CR749266 NM_020768	-1530729	+	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	-1530898	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	-1530968	-	TSC_hg19_v1_chr5_-_145214906 BC028175 AK095695 AK125215 NM_182960 NM_205846 BC012033 NM_138492	133744	-	NM_001080516	171386	-	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	235027	+	AK292477|KCTD16|57528|potassium channel tetramerisation domain containing 16##CR749266|KCTD16|57528|potassium channel tetramerisation domain containing 16##NM_020768|KCTD16|57528|potassium channel tetramerisation domain containing 16##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC028175|PRELID2|153768|PRELI domain containing 2##AK095695|PRELID2|153768|PRELI domain containing 2##AK125215|PRELID2|153768|PRELI domain containing 2##NM_182960|PRELID2|153768|PRELI domain containing 2##NM_205846|PRELID2|153768|PRELI domain containing 2##BC012033|PRELID2|153768|PRELI domain containing 2##NM_138492|PRELID2|153768|PRELI domain containing 2##NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2	0.135979	
chr6	399961	400134	reg1037408.p1	3.859	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-8283	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-107550	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-107962	+	AF508547 BC101697 BC101699 NM_148959	256906	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	293043	-	BC053850 NM_033260	912627	+	NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1	0.0	
chr9	74331211	74331321	reg1037934.p1	3.859	+	AL136545 TSC_hg19_v1_chr9_-_74061901	-269383	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	-594730	-	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	-847306	-	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	52312	-	AF151825 TSC_hg19_v1_chr9_-_74525994	194659	-	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	194890	-	AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2##AF151825|FAM108B1|51104|family with sequence similarity 108, member B1##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1	0.225951	CTCF.p2:29:0.226
chrX	64887015	64887195	reg1019638.p1	3.859	+	TSC_hg19_v1_chrX_-_64754668 AK074087 BC014545 NM_001170649 NM_001170650 NM_031206	-132441	-	CU677041 TSC_hg19_v1_chrX_-_64754635 AK225059 AF116730 BC019302 BC018610 AK022587 AK097383 AK295591	-132490	-	BC140767 BC171781 NM_001010888 BX647241	-178446	+	NM_002444 TSC_hg19_v1_chrX_+_64887520	412	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	442	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	543	+	AK074087|LAS1L|81887|LAS1-like (S. cerevisiae)##BC014545|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_001170649|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_001170650|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_031206|LAS1L|81887|LAS1-like (S. cerevisiae)##AK225059|LAS1L|81887|LAS1-like (S. cerevisiae)##AF116730|LAS1L|81887|LAS1-like (S. cerevisiae)##BC019302|LAS1L|81887|LAS1-like (S. cerevisiae)##BC018610|LAS1L|81887|LAS1-like (S. cerevisiae)##AK022587|LAS1L|81887|LAS1-like (S. cerevisiae)##AK097383|LAS1L|81887|LAS1-like (S. cerevisiae)##AK295591|LAS1L|81887|LAS1-like (S. cerevisiae)##BC140767|ZC3H12B|340554|zinc finger CCCH-type containing 12B##BC171781|ZC3H12B|340554|zinc finger CCCH-type containing 12B##NM_001010888|ZC3H12B|340554|zinc finger CCCH-type containing 12B##BX647241|ZC3H12B|340554|zinc finger CCCH-type containing 12B##NM_002444|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin	0.0	
chr12	48343612	48343752	reg1001858.p2	3.858	+	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	-44881	-	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	-130018	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-176648	+	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	13656	+	TSC_hg19_v1_chr12_+_48357387 AK310035 AK313698 AK299154 BC107792	13738	+	NM_001844 NM_033150 TSC_hg19_v1_chr12_-_48398292	54606	-	J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C##AK310035|TMEM106C|79022|transmembrane protein 106C##AK313698|TMEM106C|79022|transmembrane protein 106C##AK299154|TMEM106C|79022|transmembrane protein 106C##BC107792|TMEM106C|79022|transmembrane protein 106C##NM_001844|COL2A1|1280|collagen, type II, alpha 1##NM_033150|COL2A1|1280|collagen, type II, alpha 1	0.0	
chr1	43664848	43664980	reg1035494.p1	3.858	+	TSC_hg19_v1_chr1_-_43637988 AK299476 AK295006 NM_006824 AB590504 NM_001159936	-26810	-	NM_001167965 NM_001195831 NM_152498 AK056562 TSC_hg19_v1_chr1_+_43638044 BC117280 BC117306 BC143804	-26868	+	TSC_hg19_v1_chr1_-_43637958 AK223455	-26952	-	NM_144626 BC072393	70765	+	TSC_hg19_v1_chr1_-_43736601 BC073924	71689	-	BC041633 NM_182517 NM_001164829	86348	-	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2##AK295006|EBNA1BP2|10969|EBNA1 binding protein 2##NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2##NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2##NM_001167965|WDR65|149465|WD repeat domain 65##NM_001195831|WDR65|149465|WD repeat domain 65##NM_152498|WDR65|149465|WD repeat domain 65##AK056562|WDR65|149465|WD repeat domain 65##BC117280|WDR65|149465|WD repeat domain 65##BC117306|WDR65|149465|WD repeat domain 65##BC143804|WDR65|149465|WD repeat domain 65##AK223455|EBNA1BP2|10969|EBNA1 binding protein 2##NM_144626|TMEM125|128218|transmembrane protein 125##BC072393|TMEM125|128218|transmembrane protein 125##BC073924|EBNA1BP2|10969|EBNA1 binding protein 2##BC041633|C1orf210|149466|chromosome 1 open reading frame 210##NM_182517|C1orf210|149466|chromosome 1 open reading frame 210##NM_001164829|C1orf210|149466|chromosome 1 open reading frame 210	0.0	
chr14	50468622	50468761	reg1033283.p1	3.858	+	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-108285	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-108858	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	-108873	+	AK091232 AX746864 NM_001012706	5546	-	AF390030 NM_001014830	90669	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	114579	-	AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6##AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D	0.0	
chr15	25986307	25986488	reg1035269.p2	3.858	+	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	-302219	-	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	-302296	-	L07557 NM_130838	-335748	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	121956	-	AB051358 TSC_hg19_v1_chr15_-_26108932	122503	-	AK295167 NM_001191321 TSC_hg19_v1_chr15_-_26874238 BC038837	887883	-	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##AB051358|ATP10A|57194|ATPase, class V, type 10A##AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	0.0	
chr16	8962658	8962724	reg1034695.p2	3.858	+	NM_001042476 BC001333	-439	-	NM_000303 TSC_hg19_v1_chr16_+_8891675 AK296123 U85773 AK300785 AK291537 AK299979 AK311035 AK312532 AK304320 AK296630 BC008310	-70993	+	TSC_hg19_v1_chr16_-_8891497 BC015912 AK225638 AL080088 AK314404 NM_015421 AK093383	-71146	-	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	169	-	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	94604	-	TSC_hg19_v1_chr16_+_9185545 NM_014117	222849	+	NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_000303|PMM2|5373|phosphomannomutase 2##U85773|PMM2|5373|phosphomannomutase 2##AK300785|PMM2|5373|phosphomannomutase 2##AK291537|PMM2|5373|phosphomannomutase 2##AK299979|PMM2|5373|phosphomannomutase 2##AK311035|PMM2|5373|phosphomannomutase 2##AK312532|PMM2|5373|phosphomannomutase 2##AK304320|PMM2|5373|phosphomannomutase 2##AK296630|PMM2|5373|phosphomannomutase 2##BC008310|PMM2|5373|phosphomannomutase 2##BC015912|TMEM186|25880|transmembrane protein 186##AK225638|TMEM186|25880|transmembrane protein 186##AL080088|TMEM186|25880|transmembrane protein 186##AK314404|TMEM186|25880|transmembrane protein 186##NM_015421|TMEM186|25880|transmembrane protein 186##AK093383|TMEM186|25880|transmembrane protein 186##BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72	0.0	
chr17	2169422	2169578	reg1038301.p1	3.858	+	DQ187313 NM_001098202	-209943	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-211102	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-224192	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	37312	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	37540	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	37752	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.0	
chr17	38601349	38601522	reg1035341.p2	3.858	+	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-1616	+	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	-27311	-	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	-80489	-	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	56411	-	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	120283	-	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	202635	-	NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.0	
chr21	45661317	45661497	reg1038552.p1	3.858	+	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	-550	-	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	-641	-	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-107846	+	AF194032 NM_013369 NM_175867	20691	-	BC142608 AK309572 AB006682 NM_000383 Z97990	44337	+	AB006683 AB006685 BC137268 BC137270 NM_000658	48803	+	AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##BC142608|AIRE|326|autoimmune regulator##AK309572|AIRE|326|autoimmune regulator##AB006682|AIRE|326|autoimmune regulator##NM_000383|AIRE|326|autoimmune regulator##Z97990|AIRE|326|autoimmune regulator##AB006683|AIRE|326|autoimmune regulator##AB006685|AIRE|326|autoimmune regulator##BC137268|AIRE|326|autoimmune regulator##BC137270|AIRE|326|autoimmune regulator##NM_000658|AIRE|326|autoimmune regulator	0.0	
chr3	122072849	122072976	reg1034270.p1	3.858	+	NM_005213 AK291308 BC010379 X05978 CR456914	-28838	+	NM_001178065 U20760	-169732	+	NM_000388 U20759	-170383	+	BC019231 BC109378 TSC_hg19_v1_chr3_-_122102079 BC054051 BC062725 NM_001017928	29165	-	NM_014367 AK026030 BC010896 BC015060 AF201944 AF107495 AF250321 TSC_hg19_v1_chr3_+_122103076 AK293994 AF191020	30156	+	BC025762 NM_019069 TSC_hg19_v1_chr3_-_122134925	62005	-	NM_005213|CSTA|1475|cystatin A (stefin A)##AK291308|CSTA|1475|cystatin A (stefin A)##BC010379|CSTA|1475|cystatin A (stefin A)##X05978|CSTA|1475|cystatin A (stefin A)##CR456914|CSTA|1475|cystatin A (stefin A)##NM_001178065|CASR|846|calcium-sensing receptor##U20760|CASR|846|calcium-sensing receptor##NM_000388|CASR|846|calcium-sensing receptor##U20759|CASR|846|calcium-sensing receptor##BC109378|CCDC58|131076|coiled-coil domain containing 58##BC054051|CCDC58|131076|coiled-coil domain containing 58##BC062725|CCDC58|131076|coiled-coil domain containing 58##NM_001017928|CCDC58|131076|coiled-coil domain containing 58##NM_014367|FAM162A|26355|family with sequence similarity 162, member A##AK026030|FAM162A|26355|family with sequence similarity 162, member A##BC010896|FAM162A|26355|family with sequence similarity 162, member A##BC015060|FAM162A|26355|family with sequence similarity 162, member A##AF201944|FAM162A|26355|family with sequence similarity 162, member A##AF107495|FAM162A|26355|family with sequence similarity 162, member A##AF250321|FAM162A|26355|family with sequence similarity 162, member A##AK293994|FAM162A|26355|family with sequence similarity 162, member A##AF191020|FAM162A|26355|family with sequence similarity 162, member A##BC025762|WDR5B|54554|WD repeat domain 5B##NM_019069|WDR5B|54554|WD repeat domain 5B	0.0	
chr3	32219529	32219622	reg1024343.p3	3.858	+	TSC_hg19_v1_chr3_+_32148151 BC028726 AK292808 AB385275	-71407	+	TSC_hg19_v1_chr3_+_32148004 NM_015141 D42047	-71554	+	AF392451 NM_001174060 NM_017784	-196286	-	TSC_hg19_v1_chr3_+_32280171 AF474370 AY598783 NM_178868	60590	+	TSC_hg19_v1_chr3_+_32280215 BC041390	60644	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	213594	+	BC028726|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AK292808|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##NM_015141|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##D42047|GPD1L|23171|glycerol-3-phosphate dehydrogenase 1-like##AF392451|OSBPL10|114884|oxysterol binding protein-like 10##NM_001174060|OSBPL10|114884|oxysterol binding protein-like 10##NM_017784|OSBPL10|114884|oxysterol binding protein-like 10##AF474370|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AY598783|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##NM_178868|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7	0.371915	CTCF.p2:-8:0.372
chr3	98048330	98048414	reg1001135.p1	3.858	+	NM_001005482	-46641	+	BC137523 BC137524 NM_001005479	-65265	+	NM_001005515	-160829	+	NM_001005517	24325	+	NM_001005516	61137	+	BC136918 BC136919 NM_001004736	139999	+	NM_001005482|OR5H2|79310|olfactory receptor, family 5, subfamily H, member 2##BC137523|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##BC137524|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##NM_001005479|OR5H6|79295|olfactory receptor, family 5, subfamily H, member 6##NM_001005515|OR5H15|403274|olfactory receptor, family 5, subfamily H, member 15##NM_001005517|OR5K4|403278|olfactory receptor, family 5, subfamily K, member 4##NM_001005516|OR5K3|403277|olfactory receptor, family 5, subfamily K, member 3##BC136918|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1##BC136919|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1##NM_001004736|OR5K1|26339|olfactory receptor, family 5, subfamily K, member 1	0.0	
chr1	154847033	154847186	reg1038076.p2	3.857	+	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	-4363	-	BX649146 TSC_hg19_v1_chr1_-_154840541	-6608	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	-14847	-	BT019976 CR541998 TSC_hg19_v1_chr1_-_154909187 L77213	62065	-	TSC_hg19_v1_chr1_-_154909401 BC007694 BC000237 AK130234 AK312803 BC006089 NM_006556	62324	-	TSC_hg19_v1_chr1_-_154928571 BC016852 NM_020524 AF221521 AK023219 AK303413 AK303863 AK300987	81470	-	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BT019976|PMVK|10654|phosphomevalonate kinase##CR541998|PMVK|10654|phosphomevalonate kinase##L77213|PMVK|10654|phosphomevalonate kinase##BC007694|PMVK|10654|phosphomevalonate kinase##AK130234|PMVK|10654|phosphomevalonate kinase##AK312803|PMVK|10654|phosphomevalonate kinase##BC006089|PMVK|10654|phosphomevalonate kinase##NM_006556|PMVK|10654|phosphomevalonate kinase##BC016852|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##NM_020524|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AF221521|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK023219|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303413|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303863|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK300987|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1	0.0	
chr1	27852127	27852248	reg1036398.p1	3.857	+	TSC_hg19_v1_chr1_-_27816676 NM_001201404 NM_006990	-35511	-	TSC_hg19_v1_chr1_-_27816670 BC012329	-35516	-	TSC_hg19_v1_chr1_-_27816621 AK303011 BC032724 BC050093 BC040943	-35587	-	BC042058 NM_001029882	77934	-	BC064935 TSC_hg19_v1_chr1_-_27930394	78190	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	100483	-	NM_001201404|WASF2|10163|WAS protein family, member 2##NM_006990|WASF2|10163|WAS protein family, member 2##BC012329|WASF2|10163|WAS protein family, member 2##AK303011|WASF2|10163|WAS protein family, member 2##BC032724|WASF2|10163|WAS protein family, member 2##BC040943|WASF2|10163|WAS protein family, member 2##NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1##BC064935|AHDC1|27245|AT hook, DNA binding motif, containing 1##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	0.0	
chr13	49079944	49080077	reg1032763.p1	3.857	+	TSC_hg19_v1_chr13_+_49050586 AK307125	-29420	+	BC039373 BC045651 NM_005767	-61190	-	AK122856 NM_001162497	-78968	-	TSC_hg19_v1_chr13_-_49107217 BC029052 AK298438 AK301516 AK304598	27191	-	TSC_hg19_v1_chr13_-_49107219 AK310081	27212	-	TSC_hg19_v1_chr13_-_49107313 AK315703 NM_001268	27279	-	AK307125|RB1|5925|retinoblastoma 1##BC039373|LPAR6|10161|lysophosphatidic acid receptor 6##BC045651|LPAR6|10161|lysophosphatidic acid receptor 6##NM_005767|LPAR6|10161|lysophosphatidic acid receptor 6##AK122856|LPAR6|10161|lysophosphatidic acid receptor 6##NM_001162497|LPAR6|10161|lysophosphatidic acid receptor 6##BC029052|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK298438|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK301516|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK304598|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK310081|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK315703|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##NM_001268|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	0.0	
chr15	89942665	89942785	reg1036625.p2	3.857	+	TSC_hg19_v1_chr15_-_89878042 AK291281	-64682	-	BC050559 BC042571 NM_001126131 NM_002693 X98093 TSC_hg19_v1_chr15_-_89878036	-64704	-	TSC_hg19_v1_chr15_+_89787255 AK055176 BC140769 BC144483 BC004277	-155475	+	CU689056 AY257182 AF193809 NM_016321 BC015461 AK298252 AK298641 AF081497 AK301640 AK313238 BC030965 AK290899 AK310222	97070	-	TSC_hg19_v1_chr15_+_90118742 GQ227787 NM_152259	176053	+	TSC_hg19_v1_chr15_-_90198681 BC042063 NM_198525	255895	-	AK291281|POLG|5428|polymerase (DNA directed), gamma##BC050559|POLG|5428|polymerase (DNA directed), gamma##BC042571|POLG|5428|polymerase (DNA directed), gamma##NM_001126131|POLG|5428|polymerase (DNA directed), gamma##NM_002693|POLG|5428|polymerase (DNA directed), gamma##X98093|POLG|5428|polymerase (DNA directed), gamma##AK055176|FANCI|55215|Fanconi anemia, complementation group I##BC140769|FANCI|55215|Fanconi anemia, complementation group I##BC144483|FANCI|55215|Fanconi anemia, complementation group I##BC004277|FANCI|55215|Fanconi anemia, complementation group I##AY257182|RHCG|51458|Rh family, C glycoprotein##AF193809|RHCG|51458|Rh family, C glycoprotein##NM_016321|RHCG|51458|Rh family, C glycoprotein##BC015461|RHCG|51458|Rh family, C glycoprotein##AK298252|RHCG|51458|Rh family, C glycoprotein##AK298641|RHCG|51458|Rh family, C glycoprotein##AF081497|RHCG|51458|Rh family, C glycoprotein##AK301640|RHCG|51458|Rh family, C glycoprotein##AK313238|RHCG|51458|Rh family, C glycoprotein##BC030965|RHCG|51458|Rh family, C glycoprotein##AK290899|RHCG|51458|Rh family, C glycoprotein##AK310222|RHCG|51458|Rh family, C glycoprotein##GQ227787|C15orf42|90381|chromosome 15 open reading frame 42##NM_152259|C15orf42|90381|chromosome 15 open reading frame 42##BC042063|KIF7|374654|kinesin family member 7##NM_198525|KIF7|374654|kinesin family member 7	0.518582	CTCF.p2:-38:0.519
chr2	106724944	106725041	reg1038055.p1	3.857	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	-42828	+	NM_001004720 BC000103	-256731	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	-292017	+	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	85753	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	85766	-	TSC_hg19_v1_chr2_-_106810781 NM_025076	85813	-	BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40##NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1	0.931483	CTCF.p2:-15:0.931
chr3	185008157	185008258	reg1030256.p1	3.857	+	TSC_hg19_v1_chr3_+_185000783 NM_001242314 NM_001242317 AK297646 BC036593 AK312714 BC015996	-7458	+	BC038948 BC110460 L07077 AK301521 TSC_hg19_v1_chr3_-_184971838 AK223460 AK291798 BC011030 BC030982 NM_001166415 NM_001966	-36357	-	TSC_hg19_v1_chr3_-_184870849 AK091454 AX746993 NM_001025266	-137409	-	AK302951 TSC_hg19_v1_chr3_+_185046682 BC031677	38484	+	BC026249 NM_004721 AK296961 AB001872 BC111726	72725	+	TSC_hg19_v1_chr3_-_185216824 EU831805 EU831882 AK313954 BC019884 BC008043 BX647928 AY358547 AK172748 AK290878 NM_080652	208492	-	NM_001242314|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_001242317|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK297646|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC036593|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK312714|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC015996|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001025266|C3orf70|285382|chromosome 3 open reading frame 70##AK302951|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC031677|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##NM_004721|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AK296961|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##AB001872|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##BC111726|MAP3K13|9175|mitogen-activated protein kinase kinase kinase 13##EU831805|TMEM41A|90407|transmembrane protein 41A##EU831882|TMEM41A|90407|transmembrane protein 41A##AK313954|TMEM41A|90407|transmembrane protein 41A##BC019884|TMEM41A|90407|transmembrane protein 41A##BC008043|TMEM41A|90407|transmembrane protein 41A##BX647928|TMEM41A|90407|transmembrane protein 41A##AY358547|TMEM41A|90407|transmembrane protein 41A##AK172748|TMEM41A|90407|transmembrane protein 41A##AK290878|TMEM41A|90407|transmembrane protein 41A##NM_080652|TMEM41A|90407|transmembrane protein 41A	0.0	
chrX	19881479	19881611	reg1023803.p1	3.857	+	TSC_hg19_v1_chrX_-_19817907 NM_001024666	-63633	-	AK293234 AF542051 TSC_hg19_v1_chrX_-_19817892	-63670	-	TSC_hg19_v1_chrX_-_19689029 AK293237 NM_001184960	-192489	-	TSC_hg19_v1_chrX_-_19905450 AY542305	23918	-	TSC_hg19_v1_chrX_-_19905646 BC050663 BC015806	24087	-	TSC_hg19_v1_chrX_-_19905675 AK313308 AF230904 AY423734 NM_031892	24159	-	NM_001024666|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY542305|SH3KBP1|30011|SH3-domain kinase binding protein 1##BC050663|SH3KBP1|30011|SH3-domain kinase binding protein 1##BC015806|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK313308|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF230904|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY423734|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_031892|SH3KBP1|30011|SH3-domain kinase binding protein 1	0.0	
chr12	56472829	56472980	reg1036259.p2	3.856	+	NM_001029 BC002604	-37201	+	NM_022465 AK122880	-58145	+	TSC_hg19_v1_chr12_+_56391069 NM_000456 NM_001032386 NM_001032387 AK312763 AK309669	-81835	+	NM_001982 M34309 NM_001005915 TSC_hg19_v1_chr12_+_56473925	963	+	TSC_hg19_v1_chr12_+_56473948 AK300909 AK294719 AK291681 BC082992 M29366 S61953 BC002706 CU678138 BT007226	1110	+	NM_006191	25198	+	NM_001029|RPS26|6231|ribosomal protein S26##BC002604|RPS26|6231|ribosomal protein S26##NM_022465|IKZF4|64375|IKAROS family zinc finger 4 (Eos)##AK122880|IKZF4|64375|IKAROS family zinc finger 4 (Eos)##NM_000456|SUOX|6821|sulfite oxidase##NM_001032386|SUOX|6821|sulfite oxidase##NM_001032387|SUOX|6821|sulfite oxidase##AK312763|SUOX|6821|sulfite oxidase##NM_001982|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##M34309|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##NM_001005915|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##AK300909|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##AK294719|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##AK291681|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##BC082992|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##M29366|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##S61953|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##BC002706|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##BT007226|ERBB3|2065|v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)##NM_006191|PA2G4|5036|proliferation-associated 2G4, 38kDa	0.190842	
chr14	88459311	88459382	reg1037406.p1	3.856	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-2459761	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-2462805	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-2462873	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	117	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	213	-	NM_001201402	662	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	0.0	
chr15	62775098	62775198	reg1026430.p2	3.856	+	TSC_hg19_v1_chr15_+_62682748 AB621808	-92430	+	NM_001007595	-317667	-	NM_207322 AF504646	-415960	+	AF402000 NM_015059	164361	+	TSC_hg19_v1_chr15_+_63050761 BX648144 BX648146	275626	+	TSC_hg19_v1_chr15_+_63334949 NM_000366 NM_001018004 NM_001018005 NM_001018006 NM_001018007 NM_001018020 AK092051 AX747334 BC007433 AK057989 AK299387 AK129882 AK131384 AK309170 AL050179 M19713 DQ893259 DQ896588 CU675655 AY640414 AY640415	559754	+	AB621808|TLN2|83660|talin 2##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B##NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF402000|TLN2|83660|talin 2##NM_015059|TLN2|83660|talin 2##BX648144|TLN2|83660|talin 2##BX648146|TLN2|83660|talin 2##NM_000366|TPM1|7168|tropomyosin 1 (alpha)##NM_001018004|TPM1|7168|tropomyosin 1 (alpha)##NM_001018005|TPM1|7168|tropomyosin 1 (alpha)##NM_001018006|TPM1|7168|tropomyosin 1 (alpha)##NM_001018007|TPM1|7168|tropomyosin 1 (alpha)##NM_001018020|TPM1|7168|tropomyosin 1 (alpha)##AK092051|TPM1|7168|tropomyosin 1 (alpha)##BC007433|TPM1|7168|tropomyosin 1 (alpha)##AK057989|TPM1|7168|tropomyosin 1 (alpha)##AK299387|TPM1|7168|tropomyosin 1 (alpha)##AK129882|TPM1|7168|tropomyosin 1 (alpha)##AK131384|TPM1|7168|tropomyosin 1 (alpha)##AK309170|TPM1|7168|tropomyosin 1 (alpha)##AL050179|TPM1|7168|tropomyosin 1 (alpha)##M19713|TPM1|7168|tropomyosin 1 (alpha)##DQ893259|TPM1|7168|tropomyosin 1 (alpha)##DQ896588|TPM1|7168|tropomyosin 1 (alpha)##AY640414|TPM1|7168|tropomyosin 1 (alpha)##AY640415|TPM1|7168|tropomyosin 1 (alpha)	0.0	
chr16	30670197	30670351	reg1038028.p1	3.856	+	TSC_hg19_v1_chr16_+_30662286 BC010232 BC050677 NM_024031 BC011573 BC000119 AK074783	-8009	+	TSC_hg19_v1_chr16_+_30662098 CR936781 AK125716	-8174	+	AK310459 AB065282 BC014000 NM_138447 TSC_hg19_v1_chr16_-_30621684	-48618	-	NM_001105079	5503	+	TSC_hg19_v1_chr16_+_30676113 AK298229	5842	+	AB621816 TSC_hg19_v1_chr16_+_30709918	39662	+	BC010232|PRR14|78994|proline rich 14##BC050677|PRR14|78994|proline rich 14##NM_024031|PRR14|78994|proline rich 14##BC011573|PRR14|78994|proline rich 14##BC000119|PRR14|78994|proline rich 14##AK074783|PRR14|78994|proline rich 14##CR936781|PRR14|78994|proline rich 14##AK125716|PRR14|78994|proline rich 14##AK310459|ZNF689|115509|zinc finger protein 689##AB065282|ZNF689|115509|zinc finger protein 689##BC014000|ZNF689|115509|zinc finger protein 689##NM_138447|ZNF689|115509|zinc finger protein 689##NM_001105079|FBRS|64319|fibrosin##AK298229|FBRS|64319|fibrosin	0.0	
chr17	39485712	39485809	reg1035570.p1	3.856	+	BC069078 AJ406952 BC069297 NM_031964	-13815	-	NM_001146182	-20256	-	NM_030975	-74125	+	BC069135 NM_004138 AJ633621	21299	-	X82634 CU679547 DQ893452 DQ896286 NM_002279 BC009971	40202	-	NM_021013 BC041070	52884	-	BC069078|KRTAP17-1|83902|keratin associated protein 17-1##AJ406952|KRTAP17-1|83902|keratin associated protein 17-1##BC069297|KRTAP17-1|83902|keratin associated protein 17-1##NM_031964|KRTAP17-1|83902|keratin associated protein 17-1##NM_001146182|KRTAP16-1|100505753|keratin associated protein 16-1##NM_030975|KRTAP9-9|81870|keratin associated protein 9-9##BC069135|KRT33A|3883|keratin 33A##NM_004138|KRT33A|3883|keratin 33A##AJ633621|KRT33A|3883|keratin 33A##X82634|KRT33B|3884|keratin 33B##DQ893452|KRT33B|3884|keratin 33B##DQ896286|KRT33B|3884|keratin 33B##NM_002279|KRT33B|3884|keratin 33B##BC009971|KRT33B|3884|keratin 33B##NM_021013|KRT34|3885|keratin 34##BC041070|KRT34|3885|keratin 34	0.096315	
chr19	10676155	10676259	reg1025781.p2	3.856	+	TSC_hg19_v1_chr19_+_10654592 AK056210 AK314712 AK316454 BC068992 AK223383 BC007639 NM_032885 AJ312332 CU686689	-21529	+	AK294676 TSC_hg19_v1_chr19_+_10654589	-21627	+	AK074661 NM_001166215	-47571	-	BC009303 TSC_hg19_v1_chr19_-_10676685 AL833189 AK300780	459	-	TSC_hg19_v1_chr19_-_10676697 AK093879 AX748348 NM_023008 AK300850	490	-	CR542158 CU674892 U20498 DQ892872 DQ892951 DQ896120 AB464505 U49399 U40343 TSC_hg19_v1_chr19_-_10679530	3222	-	AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK294676|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK074661|S1PR5|53637|sphingosine-1-phosphate receptor 5##NM_001166215|S1PR5|53637|sphingosine-1-phosphate receptor 5##BC009303|KRI1|65095|KRI1 homolog (S. cerevisiae)##AL833189|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK300780|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK093879|KRI1|65095|KRI1 homolog (S. cerevisiae)##NM_023008|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK300850|KRI1|65095|KRI1 homolog (S. cerevisiae)##CR542158|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U20498|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892872|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892951|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ896120|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U49399|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U40343|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	0.0	
chr20	23059804	23059905	reg1036856.p1	3.856	+	AB587391 BC053357 M16552 X05495 BC035602 NM_000361 TSC_hg19_v1_chr20_-_23030305 AK123557	-29616	-	TSC_hg19_v1_chr20_+_23015949 BC117270 BC117272 NM_001052 BC069063	-43820	+	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	-493752	-	TSC_hg19_v1_chr20_-_23062805 AK056764	2958	-	AB527124 AM393282 AM393752 DQ891055 DQ894234 TSC_hg19_v1_chr20_-_23066962 AJ295142 AB209895 BC028075 AK299957 NM_012072 U94333	7079	-	BC003410 NM_013248 TSC_hg19_v1_chr20_+_23331435 AK026360 BC000759 BC003029 AF156957 BC002687	271590	+	BC053357|THBD|7056|thrombomodulin##M16552|THBD|7056|thrombomodulin##X05495|THBD|7056|thrombomodulin##BC035602|THBD|7056|thrombomodulin##NM_000361|THBD|7056|thrombomodulin##AK123557|THBD|7056|thrombomodulin##BC117270|SSTR4|6754|somatostatin receptor 4##BC117272|SSTR4|6754|somatostatin receptor 4##NM_001052|SSTR4|6754|somatostatin receptor 4##BC069063|SSTR4|6754|somatostatin receptor 4##AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2##AK056764|CD93|22918|CD93 molecule##AM393282|CD93|22918|CD93 molecule##AM393752|CD93|22918|CD93 molecule##DQ891055|CD93|22918|CD93 molecule##DQ894234|CD93|22918|CD93 molecule##AJ295142|CD93|22918|CD93 molecule##AB209895|CD93|22918|CD93 molecule##BC028075|CD93|22918|CD93 molecule##AK299957|CD93|22918|CD93 molecule##NM_012072|CD93|22918|CD93 molecule##U94333|CD93|22918|CD93 molecule##BC003410|NXT1|29107|NTF2-like export factor 1##NM_013248|NXT1|29107|NTF2-like export factor 1##AK026360|NXT1|29107|NTF2-like export factor 1##BC000759|NXT1|29107|NTF2-like export factor 1##BC003029|NXT1|29107|NTF2-like export factor 1##AF156957|NXT1|29107|NTF2-like export factor 1##BC002687|NXT1|29107|NTF2-like export factor 1	0.148325	
chr20	57465891	57466071	reg1033442.p2	3.856	+	TSC_hg19_v1_chr20_+_57464205 X56009	-1787	+	NM_001077490 NM_080425	-37946	+	AJ251759 TSC_hg19_v1_chr20_-_57425958	-40024	-	TSC_hg19_v1_chr20_+_57466445 NM_000516 NM_001077488 NM_001077489 NM_080426 AK026564 AK225818 BC008855 BC089157	376	+	TSC_hg19_v1_chr20_+_57466632 BC108315 BC002722 BC104928 X04408	633	+	TSC_hg19_v1_chr20_+_57466745 X04409 AB385065 EU832170 EU832264 CU678144 CU679149 X07036 AF064092 AF088184 AF493897 AF493898 BC066923 BT009905 M14631 AK315860 BC022875	847	+	X56009|GNAS|2778|GNAS complex locus##NM_001077490|GNAS|2778|GNAS complex locus##NM_080425|GNAS|2778|GNAS complex locus##AJ251759|GNAS-AS1|149775|GNAS antisense RNA 1 (non-protein coding)##NM_000516|GNAS|2778|GNAS complex locus##NM_001077488|GNAS|2778|GNAS complex locus##NM_001077489|GNAS|2778|GNAS complex locus##NM_080426|GNAS|2778|GNAS complex locus##AK026564|GNAS|2778|GNAS complex locus##AK225818|GNAS|2778|GNAS complex locus##BC008855|GNAS|2778|GNAS complex locus##BC089157|GNAS|2778|GNAS complex locus##BC108315|GNAS|2778|GNAS complex locus##BC002722|GNAS|2778|GNAS complex locus##BC104928|GNAS|2778|GNAS complex locus##X04408|GNAS|2778|GNAS complex locus##X04409|GNAS|2778|GNAS complex locus##EU832170|GNAS|2778|GNAS complex locus##EU832264|GNAS|2778|GNAS complex locus##X07036|GNAS|2778|GNAS complex locus##AF064092|GNAS|2778|GNAS complex locus##AF088184|GNAS|2778|GNAS complex locus##AF493897|GNAS|2778|GNAS complex locus##AF493898|GNAS|2778|GNAS complex locus##BC066923|GNAS|2778|GNAS complex locus##BT009905|GNAS|2778|GNAS complex locus##M14631|GNAS|2778|GNAS complex locus##AK315860|GNAS|2778|GNAS complex locus##BC022875|GNAS|2778|GNAS complex locus	0.0	
chr2	147939378	147939473	reg1027671.p1	3.856	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-2661504	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-2661794	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-2664222	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	662692	+	TSC_hg19_v1_chr2_+_148602300 AK314124	662910	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	663220	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.0	
chr4	26070840	26070920	reg1005862.p1	3.856	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-155016	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-206326	-	NM_001177999 AK314514	-412790	+	L07875 BC020780 NM_005349 NM_203283	250439	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	251429	+	TSC_hg19_v1_chr4_+_26322635 AK302230	251756	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.0	
chr4	68424354	68424470	reg1037613.p1	3.856	+	TSC_hg19_v1_chr4_-_68411282 NM_001812	-13134	-	TSC_hg19_v1_chr4_-_68411224 BC030695 BX648166 BC041117 AK307928 AK308170 M95724	-13204	-	CU688992 TSC_hg19_v1_chr4_-_68411171	-13289	-	TSC_hg19_v1_chr4_+_68424444 AB023483 NM_012108 AK313676 BC014958 AB528919 CU677135	73	+	TSC_hg19_v1_chr4_-_68566842 AB014773 AB463334 AM392673 EF623993	142406	-	TSC_hg19_v1_chr4_-_68566867 AL832015 AL832458 AK094969 AK314371 BC031637 BC126484 BC126486 NM_018227	142459	-	NM_001812|CENPC1|1060|centromere protein C 1##BC030695|CENPC1|1060|centromere protein C 1##BX648166|CENPC1|1060|centromere protein C 1##BC041117|CENPC1|1060|centromere protein C 1##AK307928|CENPC1|1060|centromere protein C 1##AK308170|CENPC1|1060|centromere protein C 1##M95724|CENPC1|1060|centromere protein C 1##AB023483|STAP1|26228|signal transducing adaptor family member 1##NM_012108|STAP1|26228|signal transducing adaptor family member 1##AK313676|STAP1|26228|signal transducing adaptor family member 1##BC014958|STAP1|26228|signal transducing adaptor family member 1##AB014773|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AM392673|UBA6|55236|ubiquitin-like modifier activating enzyme 6##EF623993|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AL832015|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AL832458|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK094969|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK314371|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC031637|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC126484|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC126486|UBA6|55236|ubiquitin-like modifier activating enzyme 6##NM_018227|UBA6|55236|ubiquitin-like modifier activating enzyme 6	0.150563	
chr6	371299	371420	reg1026277.p1	3.856	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-78862	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-79274	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	20405	+	AF508547 BC101697 BC101699 NM_148959	285594	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	321731	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chr7	65878734	65878885	reg1033633.p1	3.856	+	TSC_hg19_v1_chr7_+_65670320 NM_003596 AK307053 AK313098	-208500	+	TSC_hg19_v1_chr7_+_65579866 BC040107 BX647867 U51134	-298907	+	TSC_hg19_v1_chr7_+_65579836 AK290553 AK311829 BC105808	-298974	+	TSC_hg19_v1_chr7_+_65958724 AY726579	79894	+	TSC_hg19_v1_chr7_-_66057374 BC080520 BC057835 BC067867 AK310548 BC103766 AK310370 AK296922	178552	-	TSC_hg19_v1_chr7_+_66093867 NM_001167961 NM_153033	215065	+	NM_003596|TPST1|8460|tyrosylprotein sulfotransferase 1##AK307053|TPST1|8460|tyrosylprotein sulfotransferase 1##AK313098|TPST1|8460|tyrosylprotein sulfotransferase 1##BC040107|CRCP|27297|CGRP receptor component##BX647867|CRCP|27297|CGRP receptor component##U51134|CRCP|27297|CGRP receptor component##AK290553|CRCP|27297|CGRP receptor component##AK311829|CRCP|27297|CGRP receptor component##BC105808|CRCP|27297|CGRP receptor component##AK310548|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##BC103766|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK310370|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK296922|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##NM_001167961|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_153033|KCTD7|154881|potassium channel tetramerisation domain containing 7	0.219756	CTCF.p2:7:0.220
chr7	73679157	73679335	reg1035689.p1	3.856	+	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	-10510	-	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	-10535	-	TSC_hg19_v1_chr7_+_73624361 AF252613	-54892	+	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	24541	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	188918	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	189062	+	NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AF252613|LAT2|7462|linker for activation of T cells family, member 2##AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1	0.0	
chr8	68136541	68136622	reg1042201.p1	3.856	+	TSC_hg19_v1_chr8_+_67976626 AM156947 BX649147 NM_024790 BC029445 AK096205 AB527449 AK127108	-159945	+	TSC_hg19_v1_chr8_-_67974551 NM_006837 BX648542	-162022	-	TSC_hg19_v1_chr8_-_67974369 BC007272 BC001859 U70734 U65928 AK310434 AK311071 BC001187 AK056967	-162228	-	NM_006421 TSC_hg19_v1_chr8_-_68256017	119384	-	BC030256 TSC_hg19_v1_chr8_+_68256207	119574	+	AF221594 AY044833 BC033684 NM_020361	522017	-	AM156947|CSPP1|79848|centrosome and spindle pole associated protein 1##BX649147|CSPP1|79848|centrosome and spindle pole associated protein 1##NM_024790|CSPP1|79848|centrosome and spindle pole associated protein 1##BC029445|CSPP1|79848|centrosome and spindle pole associated protein 1##AK096205|CSPP1|79848|centrosome and spindle pole associated protein 1##AK127108|CSPP1|79848|centrosome and spindle pole associated protein 1##NM_006837|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##BX648542|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##BC007272|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##BC001859|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##U70734|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##U65928|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##AK310434|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##AK311071|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##BC001187|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##AK056967|COPS5|10987|COP9 constitutive photomorphogenic homolog subunit 5 (Arabidopsis)##NM_006421|ARFGEF1|10565|ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)##AF221594|CPA6|57094|carboxypeptidase A6##AY044833|CPA6|57094|carboxypeptidase A6##BC033684|CPA6|57094|carboxypeptidase A6##NM_020361|CPA6|57094|carboxypeptidase A6	0.0	
chr8	81068642	81068822	reg1037204.p2	3.856	+	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-75703	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	-126230	-	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	-388735	-	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	15038	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	329752	+	AK131274 NM_001033723	718283	-	AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704	0.0	
chrX	55535323	55535450	reg1043931.p1	3.856	+	NM_201286 BC035907	-19754	-	AF143235 NM_014061 TSC_hg19_v1_chrX_+_55478594 BC011954 AF320912 AK313527	-56813	+	BC009230 NM_130467 NM_001013435 AJ344352 BC110803	-288569	+	BC012934 NM_198451	114446	+	TSC_hg19_v1_chrX_+_55744181 NM_006064 NM_016656 AL831926 AK289407 BC034726 X90530	208802	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	723524	+	NM_201286|USP51|158880|ubiquitin specific peptidase 51##BC035907|USP51|158880|ubiquitin specific peptidase 51##AF143235|MAGEH1|28986|melanoma antigen family H, 1##NM_014061|MAGEH1|28986|melanoma antigen family H, 1##BC011954|MAGEH1|28986|melanoma antigen family H, 1##AF320912|MAGEH1|28986|melanoma antigen family H, 1##AK313527|MAGEH1|28986|melanoma antigen family H, 1##BC009230|PAGE5|90737|P antigen family, member 5 (prostate associated)##NM_130467|PAGE5|90737|P antigen family, member 5 (prostate associated)##NM_001013435|PAGE5|90737|P antigen family, member 5 (prostate associated)##AJ344352|PAGE5|90737|P antigen family, member 5 (prostate associated)##BC110803|PAGE5|90737|P antigen family, member 5 (prostate associated)##BC012934|FOXR2|139628|forkhead box R2##NM_198451|FOXR2|139628|forkhead box R2##NM_006064|RRAGB|10325|Ras-related GTP binding B##NM_016656|RRAGB|10325|Ras-related GTP binding B##AL831926|RRAGB|10325|Ras-related GTP binding B##AK289407|RRAGB|10325|Ras-related GTP binding B##BC034726|RRAGB|10325|Ras-related GTP binding B##X90530|RRAGB|10325|Ras-related GTP binding B##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8	0.047292	
chr11	26671328	26671404	reg1002497.p1	3.855	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	-77626	-	NM_031418 AK302659	-317636	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-2152717	+	BC049207 NM_178498	72193	-	NM_203371 TSC_hg19_v1_chr11_+_27015658	344276	+	TSC_hg19_v1_chr11_+_27015673 AK310616	344304	+	AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)	0.0	
chr15	26505829	26505904	reg1026826.p1	3.855	+	AB051358 TSC_hg19_v1_chr15_-_26108932	-396966	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	-397513	-	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	-821688	-	AK295167 NM_001191321 TSC_hg19_v1_chr15_-_26874238 BC038837	368414	-	AK302822 NM_001191320	456045	-	AB529097 DQ891086 EU176555 TSC_hg19_v1_chr15_-_27018110	512243	-	AB051358|ATP10A|57194|ATPase, class V, type 10A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##AK302822|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191320|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##DQ891086|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##EU176555|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	0.975468	CTCF.p2:3:0.975
chr15	97034990	97035098	reg1040998.p1	3.855	+	NM_001145157	-158476	+	AK316086 NM_001145156	-159251	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	-161067	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	291628	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	1468875	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	1468907	+	NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4	0.310251	CTCF.p2:-17:0.310
chr16	32926885	32926991	reg1039996.p2	3.855	+	AK300387 TSC_hg19_v1_chr16_+_32752635	-174302	+	AL133588 NM_016212	-238886	-	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	-239505	-	AL133588 NM_016212	278041	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	278660	+	AL133588 NM_016212	334576	+	AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3	0.754417	CTCF.p2:-14:0.754
chr17	1162729	1162864	reg1011455.p2	3.855	+	TSC_hg19_v1_chr17_-_1090565 AK126882 AK124547 NM_001159746	-72208	-	AK302682 AB384846 TSC_hg19_v1_chr17_-_1083048 NM_021962 U01147	-79727	-	TSC_hg19_v1_chr17_-_1029059 AK307827	-133722	-	NM_001164405	11061	+	AB090231 NM_172367 BC142615	20168	+	TSC_hg19_v1_chr17_-_1248347 L13388	85560	-	AK126882|ABR|29|active BCR-related gene##AK124547|ABR|29|active BCR-related gene##NM_001159746|ABR|29|active BCR-related gene##AK302682|ABR|29|active BCR-related gene##NM_021962|ABR|29|active BCR-related gene##U01147|ABR|29|active BCR-related gene##AK307827|ABR|29|active BCR-related gene##NM_001164405|BHLHA9|727857|basic helix-loop-helix family, member a9##AB090231|TUSC5|286753|tumor suppressor candidate 5##NM_172367|TUSC5|286753|tumor suppressor candidate 5##BC142615|TUSC5|286753|tumor suppressor candidate 5##L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	0.0	
chr2	68519231	68519411	reg1004553.p1	3.855	+	TSC_hg19_v1_chr2_-_68479665 AK307136 AK314893 BC027913 NM_000945	-39726	-	TSC_hg19_v1_chr2_+_68384999 BC008304 NM_020143 AK291715 AF349314 AF164799 AK313204 AK223118 L48692 AK225641 BC018152	-134224	+	CU680746 EU831464 EU831551 EU832799 GQ129363 TSC_hg19_v1_chr2_-_68384660 BC036904 BC014022 AL834142 BC066657 BC020271 AK056303 NM_138458 AY541587 AK058090	-134687	-	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	27779	-	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	73051	+	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	73136	+	AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC008304|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_020143|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK291715|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF349314|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF164799|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK313204|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK223118|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK225641|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##BC018152|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##EU831464|WDR92|116143|WD repeat domain 92##EU831551|WDR92|116143|WD repeat domain 92##EU832799|WDR92|116143|WD repeat domain 92##GQ129363|WDR92|116143|WD repeat domain 92##BC036904|WDR92|116143|WD repeat domain 92##BC014022|WDR92|116143|WD repeat domain 92##AL834142|WDR92|116143|WD repeat domain 92##BC066657|WDR92|116143|WD repeat domain 92##BC020271|WDR92|116143|WD repeat domain 92##AK056303|WDR92|116143|WD repeat domain 92##NM_138458|WDR92|116143|WD repeat domain 92##AY541587|WDR92|116143|WD repeat domain 92##AK058090|WDR92|116143|WD repeat domain 92##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin##DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin	0.0	
chr3	52040714	52040780	reg1034830.p2	3.855	+	BC008926 NM_000992 TSC_hg19_v1_chr3_-_52029968	-10784	-	TSC_hg19_v1_chr3_-_52029912 BC070190 AK289538 AK311884 D28412	-10834	-	TSC_hg19_v1_chr3_-_52029890 BC071663 U49083 U10248 Z49148 BC071909 BC070481	-10866	-	X93921 TSC_hg19_v1_chr3_-_52090192 BC019107 AF508727 BC104880 BC104882 NM_001947	49528	-	TSC_hg19_v1_chr3_-_52188413 BC119692 AK075289 BC119693 AK315688	147683	-	BC110877 NM_001161580 NM_001161581 NM_015426	147958	-	BC008926|RPL29|6159|ribosomal protein L29##NM_000992|RPL29|6159|ribosomal protein L29##BC070190|RPL29|6159|ribosomal protein L29##AK289538|RPL29|6159|ribosomal protein L29##AK311884|RPL29|6159|ribosomal protein L29##D28412|RPL29|6159|ribosomal protein L29##BC071663|RPL29|6159|ribosomal protein L29##U49083|RPL29|6159|ribosomal protein L29##U10248|RPL29|6159|ribosomal protein L29##Z49148|RPL29|6159|ribosomal protein L29##BC071909|RPL29|6159|ribosomal protein L29##BC070481|RPL29|6159|ribosomal protein L29##X93921|DUSP7|1849|dual specificity phosphatase 7##BC019107|DUSP7|1849|dual specificity phosphatase 7##AF508727|DUSP7|1849|dual specificity phosphatase 7##BC104880|DUSP7|1849|dual specificity phosphatase 7##BC104882|DUSP7|1849|dual specificity phosphatase 7##NM_001947|DUSP7|1849|dual specificity phosphatase 7##BC119692|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK075289|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC119693|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK315688|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC110877|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161580|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161581|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_015426|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)	0.0	
chr3	72806141	72806321	reg1028733.p1	3.855	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-971960	-	AK313656 NM_173359	-1002308	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-1002709	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	91317	-	BC017274 TSC_hg19_v1_chr3_-_72897575	91344	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	91361	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr5	10565771	10565948	reg1035625.p2	3.855	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-1417	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-123707	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-123856	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	195400	-	TSC_hg19_v1_chr5_-_10761341 BC002726	195483	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	195540	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.0	
chr5	149184212	149184293	reg1034338.p1	3.855	+	AK123614 NM_001172699	-32750	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	-74376	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	-74425	+	BC144044 BC035909 AB593141 M26061 NM_000440	140066	-	TSC_hg19_v1_chr5_+_149340320 NM_000112	156056	+	TSC_hg19_v1_chr5_+_149340352 AK312596	156099	+	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144044|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##BC035909|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##AB593141|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##M26061|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000440|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2	0.0	
chr6	162039969	162040073	reg1038251.p1	3.855	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	-344961	-	AK094629 TSC_hg19_v1_chr6_-_161413451	-626608	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-627163	+	AK057286 NM_001080378 NM_152410 BC044227	1108148	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	1108706	-	TSC_hg19_v1_chr6_-_163148797 AB245403 AK292590 BC022014	1108757	-	AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB245403|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AK292590|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##BC022014|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.903459	CTCF.p2:27:0.903
chr6	45649749	45649889	reg1031157.p2	3.855	+	TSC_hg19_v1_chr6_+_45390379 L40992	-259407	+	TSC_hg19_v1_chr6_+_45390325 BC108919 BC108920	-259514	+	TSC_hg19_v1_chr6_+_45389825 NM_004348	-259954	+	DQ892643 DQ895881 CU690236 AF176920 AK314416 AK075163 TSC_hg19_v1_chr6_-_45983598 AK075144 AF216941 AK222544 BC035968 DQ679794 AK223130 NM_016929	333658	-	AY032602 AK097048 NM_001114086	398212	-	NM_014936 TSC_hg19_v1_chr6_+_46097726 BC018054	447895	+	L40992|RUNX2|860|runt-related transcription factor 2##BC108919|RUNX2|860|runt-related transcription factor 2##BC108920|RUNX2|860|runt-related transcription factor 2##NM_004348|RUNX2|860|runt-related transcription factor 2##DQ892643|CLIC5|53405|chloride intracellular channel 5##DQ895881|CLIC5|53405|chloride intracellular channel 5##AF176920|CLIC5|53405|chloride intracellular channel 5##AK314416|CLIC5|53405|chloride intracellular channel 5##AK075163|CLIC5|53405|chloride intracellular channel 5##AK075144|CLIC5|53405|chloride intracellular channel 5##AF216941|CLIC5|53405|chloride intracellular channel 5##AK222544|CLIC5|53405|chloride intracellular channel 5##BC035968|CLIC5|53405|chloride intracellular channel 5##DQ679794|CLIC5|53405|chloride intracellular channel 5##AK223130|CLIC5|53405|chloride intracellular channel 5##NM_016929|CLIC5|53405|chloride intracellular channel 5##AY032602|CLIC5|53405|chloride intracellular channel 5##AK097048|CLIC5|53405|chloride intracellular channel 5##NM_001114086|CLIC5|53405|chloride intracellular channel 5##NM_014936|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##BC018054|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)	0.0	
chr7	100958669	100958790	reg1034385.p2	3.855	+	TSC_hg19_v1_chr7_-_100895576 AK311665 AK310968 AK091729	-63163	-	TSC_hg19_v1_chr7_-_100888367 NM_016068	-70359	-	CU678480 BC003540 BC009428 TSC_hg19_v1_chr7_-_100888363 AF151893	-70404	-	TSC_hg19_v1_chr7_-_100965079 CU678746 CU679505 BC050531 AK024179 AK298888 AK023287 AK292254 BC004522 AK308684 BC038668 BC009823 AK294653 NM_001130820 NM_001130821 NM_001130822 NM_022777	6309	-	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	47488	+	BC002778 NM_138403	313846	-	AK311665|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AK310968|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##NM_016068|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC003540|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC009428|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AF151893|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC050531|RABL5|64792|RAB, member RAS oncogene family-like 5##AK024179|RABL5|64792|RAB, member RAS oncogene family-like 5##AK298888|RABL5|64792|RAB, member RAS oncogene family-like 5##AK023287|RABL5|64792|RAB, member RAS oncogene family-like 5##AK292254|RABL5|64792|RAB, member RAS oncogene family-like 5##BC004522|RABL5|64792|RAB, member RAS oncogene family-like 5##BC038668|RABL5|64792|RAB, member RAS oncogene family-like 5##BC009823|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130820|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130821|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_001130822|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_022777|RABL5|64792|RAB, member RAS oncogene family-like 5##NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory	0.962412	CTCF.p2:-4:0.962
chr1	114521714	114521894	reg1005157.p2	3.854	+	BC036057 NM_181358	-25306	+	BC028408 NM_198269	-28038	+	AB089957 TSC_hg19_v1_chr1_+_114472488	-49336	+	AY358954 NM_020190 AY464015 AK092766 AX747716 AK075369 TSC_hg19_v1_chr1_+_114522099 AK297902 AF201945 AK223221 BC009920 AK222471 AK075479 AK075353 AK075544 AB590196 DQ892781 DQ896028 CU679529	279	+	AK056448 NM_205848	173257	-	BC044948 NM_001253772	174667	-	BC036057|HIPK1|204851|homeodomain interacting protein kinase 1##NM_181358|HIPK1|204851|homeodomain interacting protein kinase 1##BC028408|HIPK1|204851|homeodomain interacting protein kinase 1##NM_198269|HIPK1|204851|homeodomain interacting protein kinase 1##AB089957|HIPK1|204851|homeodomain interacting protein kinase 1##AY358954|OLFML3|56944|olfactomedin-like 3##NM_020190|OLFML3|56944|olfactomedin-like 3##AY464015|OLFML3|56944|olfactomedin-like 3##AK092766|OLFML3|56944|olfactomedin-like 3##AK075369|OLFML3|56944|olfactomedin-like 3##AK297902|OLFML3|56944|olfactomedin-like 3##AF201945|OLFML3|56944|olfactomedin-like 3##AK223221|OLFML3|56944|olfactomedin-like 3##BC009920|OLFML3|56944|olfactomedin-like 3##AK222471|OLFML3|56944|olfactomedin-like 3##AK075479|OLFML3|56944|olfactomedin-like 3##AK075353|OLFML3|56944|olfactomedin-like 3##AK075544|OLFML3|56944|olfactomedin-like 3##DQ892781|OLFML3|56944|olfactomedin-like 3##DQ896028|OLFML3|56944|olfactomedin-like 3##AK056448|SYT6|148281|synaptotagmin VI##NM_205848|SYT6|148281|synaptotagmin VI##BC044948|SYT6|148281|synaptotagmin VI##NM_001253772|SYT6|148281|synaptotagmin VI	0.0	
chr1	160071045	160071226	reg1007535.p2	3.854	+	AK308115 NM_001206665 TSC_hg19_v1_chr1_-_160068754	-2447	-	TSC_hg19_v1_chr1_-_160068411 AF407274 AK055843 BC053881 NM_052868	-2720	-	AB590475 TSC_hg19_v1_chr1_-_160068277 AY157579 AF311906 AY044845	-2838	-	NM_000702 AK124581 AK091617 AK225127 AK295048 AK314296 TSC_hg19_v1_chr1_+_160085548 BC047533 AB018321 BC052271	14408	+	NM_144699 AF506797 BC068570 BC036052 BX647234 AL833335 AK308286 BC094801	50240	+	BC028297 NM_001001734	76065	+	AK308115|IGSF8|93185|immunoglobulin superfamily, member 8##NM_001206665|IGSF8|93185|immunoglobulin superfamily, member 8##AF407274|IGSF8|93185|immunoglobulin superfamily, member 8##AK055843|IGSF8|93185|immunoglobulin superfamily, member 8##BC053881|IGSF8|93185|immunoglobulin superfamily, member 8##NM_052868|IGSF8|93185|immunoglobulin superfamily, member 8##AY157579|IGSF8|93185|immunoglobulin superfamily, member 8##AF311906|IGSF8|93185|immunoglobulin superfamily, member 8##AY044845|IGSF8|93185|immunoglobulin superfamily, member 8##NM_000702|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK124581|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK091617|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK295048|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AK314296|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##BC047533|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##AB018321|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##BC052271|ATP1A2|477|ATPase, Na+/K+ transporting, alpha 2 polypeptide##NM_144699|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AF506797|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC068570|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC036052|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BX647234|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AL833335|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##AK308286|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC094801|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##BC028297|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide##NM_001001734|ATP1A4|480|ATPase, Na+/K+ transporting, alpha 4 polypeptide	0.0	
chr19	40898981	40899079	reg1027392.p1	3.854	+	AK302301 AK301713 AK292228 BC034501 NM_144685 AK057380	-2943	-	BC000553 TSC_hg19_v1_chr19_+_40872852	-26247	+	TSC_hg19_v1_chr19_+_40854603 BC036327 AK293690 BC096820	-44440	+	AF321191 AF321192 NM_020956 NM_181882 BC067266	20241	-	BC002670 AF366402 AF117959 AK222970 AK223011 TSC_hg19_v1_chr19_-_40931900 AK074652 NM_013376	32875	-	AF192529 NM_013368	49474	-	AK302301|HIPK4|147746|homeodomain interacting protein kinase 4##AK301713|HIPK4|147746|homeodomain interacting protein kinase 4##AK292228|HIPK4|147746|homeodomain interacting protein kinase 4##BC034501|HIPK4|147746|homeodomain interacting protein kinase 4##NM_144685|HIPK4|147746|homeodomain interacting protein kinase 4##AK057380|HIPK4|147746|homeodomain interacting protein kinase 4##BC000553|PLD3|23646|phospholipase D family, member 3##BC036327|PLD3|23646|phospholipase D family, member 3##AK293690|PLD3|23646|phospholipase D family, member 3##BC096820|PLD3|23646|phospholipase D family, member 3##AF321191|PRX|57716|periaxin##AF321192|PRX|57716|periaxin##NM_020956|PRX|57716|periaxin##NM_181882|PRX|57716|periaxin##BC067266|PRX|57716|periaxin##BC002670|SERTAD1|29950|SERTA domain containing 1##AF366402|SERTAD1|29950|SERTA domain containing 1##AF117959|SERTAD1|29950|SERTA domain containing 1##AK222970|SERTAD1|29950|SERTA domain containing 1##AK223011|SERTAD1|29950|SERTA domain containing 1##AK074652|SERTAD1|29950|SERTA domain containing 1##NM_013376|SERTAD1|29950|SERTA domain containing 1##AF192529|SERTAD3|29946|SERTA domain containing 3##NM_013368|SERTAD3|29946|SERTA domain containing 3	0.643204	CTCF.p2:-25:0.643
chr21	43729156	43729230	reg1001595.p1	3.854	+	TSC_hg19_v1_chr21_+_43710190 AF038175	-18980	+	AK298491 AF323664 NM_207174	-89225	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	-89900	+	L08044 DQ891963 DQ895153 L15203 BC017859 TSC_hg19_v1_chr21_-_43735520	6298	-	NM_003226 AF432265	6539	-	X51698 BC032820 NM_005423	41945	-	AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK298491|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323664|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207174|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##L08044|TFF3|7033|trefoil factor 3 (intestinal)##DQ891963|TFF3|7033|trefoil factor 3 (intestinal)##DQ895153|TFF3|7033|trefoil factor 3 (intestinal)##L15203|TFF3|7033|trefoil factor 3 (intestinal)##BC017859|TFF3|7033|trefoil factor 3 (intestinal)##NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2	0.92478	CTCF.p2:-8:0.925
chr4	2912279	2912377	reg1037253.p2	3.854	+	AK025413 TSC_hg19_v1_chr4_+_2883766	-28627	+	TSC_hg19_v1_chr4_+_2845627 AH004561 S70310 BC013393 AK309186	-66662	+	TSC_hg19_v1_chr4_+_2845589 NM_001119 NM_014189 NM_014190 NM_176801	-66749	+	CU677155 EU176393 EU176739 L11669 TSC_hg19_v1_chr4_-_2935840	23419	-	TSC_hg19_v1_chr4_-_2935854 NM_001120	23579	-	TSC_hg19_v1_chr4_-_2936515 BC001502 BC014979	24159	-	AK025413|ADD1|118|adducin 1 (alpha)##S70310|ADD1|118|adducin 1 (alpha)##BC013393|ADD1|118|adducin 1 (alpha)##AK309186|ADD1|118|adducin 1 (alpha)##NM_001119|ADD1|118|adducin 1 (alpha)##NM_014189|ADD1|118|adducin 1 (alpha)##NM_014190|ADD1|118|adducin 1 (alpha)##NM_176801|ADD1|118|adducin 1 (alpha)##EU176393|MFSD10|10227|major facilitator superfamily domain containing 10##EU176739|MFSD10|10227|major facilitator superfamily domain containing 10##L11669|MFSD10|10227|major facilitator superfamily domain containing 10##NM_001120|MFSD10|10227|major facilitator superfamily domain containing 10##BC001502|MFSD10|10227|major facilitator superfamily domain containing 10##BC014979|MFSD10|10227|major facilitator superfamily domain containing 10	0.356703	CTCF.p2:17:0.357
chr5	176245985	176246120	reg1031263.p2	3.854	+	TSC_hg19_v1_chr5_+_176237521 AK131380 NM_133369 BC157824	-8497	+	TSC_hg19_v1_chr5_+_176074497 AK024427 BC067105 BC010405 AF174603 CU679699 CU688248	-171500	+	NM_001006616 NM_012171 NM_130465 TSC_hg19_v1_chr5_+_176074470 AY037146	-171622	+	U51333 BC028129 NM_002115	80271	-	AK304794 BX537376 NM_016290 AK023044 BC032561 BC006078 BC014069 AF349313 NM_001199297 NM_001199298 TSC_hg19_v1_chr5_-_176433806	187536	-	AK297448 AK297584 NM_012279 TSC_hg19_v1_chr5_+_176449708 AK295549 AF083340 AK026627 AK300065 BC007775 AL359576 CR749692 AK131469 AK300738 AB463365 AM392799 AM393768	203667	+	AK131380|UNC5A|90249|unc-5 homolog A (C. elegans)##NM_133369|UNC5A|90249|unc-5 homolog A (C. elegans)##BC157824|UNC5A|90249|unc-5 homolog A (C. elegans)##AK024427|TSPAN17|26262|tetraspanin 17##BC067105|TSPAN17|26262|tetraspanin 17##BC010405|TSPAN17|26262|tetraspanin 17##AF174603|TSPAN17|26262|tetraspanin 17##NM_001006616|TSPAN17|26262|tetraspanin 17##NM_012171|TSPAN17|26262|tetraspanin 17##NM_130465|TSPAN17|26262|tetraspanin 17##AY037146|TSPAN17|26262|tetraspanin 17##U51333|HK3|3101|hexokinase 3 (white cell)##BC028129|HK3|3101|hexokinase 3 (white cell)##NM_002115|HK3|3101|hexokinase 3 (white cell)##AK304794|UIMC1|51720|ubiquitin interaction motif containing 1##BX537376|UIMC1|51720|ubiquitin interaction motif containing 1##NM_016290|UIMC1|51720|ubiquitin interaction motif containing 1##AK023044|UIMC1|51720|ubiquitin interaction motif containing 1##BC032561|UIMC1|51720|ubiquitin interaction motif containing 1##BC006078|UIMC1|51720|ubiquitin interaction motif containing 1##AF349313|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199297|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199298|UIMC1|51720|ubiquitin interaction motif containing 1##AK297448|ZNF346|23567|zinc finger protein 346##NM_012279|ZNF346|23567|zinc finger protein 346##AK295549|ZNF346|23567|zinc finger protein 346##AF083340|ZNF346|23567|zinc finger protein 346##AK026627|ZNF346|23567|zinc finger protein 346##AK300065|ZNF346|23567|zinc finger protein 346##BC007775|ZNF346|23567|zinc finger protein 346##AL359576|ZNF346|23567|zinc finger protein 346##CR749692|ZNF346|23567|zinc finger protein 346##AK131469|ZNF346|23567|zinc finger protein 346##AK300738|ZNF346|23567|zinc finger protein 346##AM392799|ZNF346|23567|zinc finger protein 346##AM393768|ZNF346|23567|zinc finger protein 346	0.0	
chr5	72683075	72683163	reg1043176.p1	3.854	+	AK315460 NM_153217 AK055830	-214088	+	TSC_hg19_v1_chr5_+_72416401 NM_001161342 NM_173490 BC018083	-266683	+	TSC_hg19_v1_chr5_+_72251897 AK291782 BC006004 AK295141 BC014311 AL831971 AM393291 AM393840 CU676963	-431218	+	U13222 TSC_hg19_v1_chr5_-_72743884	60740	-	NM_004472 U59832 TSC_hg19_v1_chr5_-_72744463	61290	-	TSC_hg19_v1_chr5_+_72794266 NM_001037637 NM_001207 AK310919 AK225964 AK291125	111140	+	AK315460|TMEM174|134288|transmembrane protein 174##NM_153217|TMEM174|134288|transmembrane protein 174##AK055830|TMEM174|134288|transmembrane protein 174##NM_001161342|TMEM171|134285|transmembrane protein 171##NM_173490|TMEM171|134285|transmembrane protein 171##BC018083|TMEM171|134285|transmembrane protein 171##AK291782|FCHO2|115548|FCH domain only 2##BC006004|FCHO2|115548|FCH domain only 2##AK295141|FCHO2|115548|FCH domain only 2##BC014311|FCHO2|115548|FCH domain only 2##AL831971|FCHO2|115548|FCH domain only 2##AM393291|FCHO2|115548|FCH domain only 2##AM393840|FCHO2|115548|FCH domain only 2##U13222|FOXD1|2297|forkhead box D1##NM_004472|FOXD1|2297|forkhead box D1##U59832|FOXD1|2297|forkhead box D1##NM_001037637|BTF3|689|basic transcription factor 3##NM_001207|BTF3|689|basic transcription factor 3##AK310919|BTF3|689|basic transcription factor 3##AK225964|BTF3|689|basic transcription factor 3##AK291125|BTF3|689|basic transcription factor 3	0.964516	CTCF.p2:-15:0.965
chr7	73385719	73385848	reg1033870.p1	3.854	+	AY372053 BC030643 NM_182504 GQ129394 GQ129395 AY372054	-110259	+	TSC_hg19_v1_chr7_-_73256847 AK301597 AF534110 NM_152559 AY354928	-128921	-	NM_001305 TSC_hg19_v1_chr7_+_73245327 AK026651 AK124076 BC000671 AB000712	-140512	+	NM_000501 NM_001081752 NM_001081753 NM_001081754 NM_001081755 AK075554 TSC_hg19_v1_chr7_+_73442441 AK075494	56650	+	TSC_hg19_v1_chr7_+_73442462 AK125511 AK130894	56673	+	TSC_hg19_v1_chr7_+_73442469 M36860 X52896	56686	+	AY372053|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##BC030643|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##NM_182504|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129394|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129395|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##AY372054|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_001305|CLDN4|1364|claudin 4##AK026651|CLDN4|1364|claudin 4##AK124076|CLDN4|1364|claudin 4##BC000671|CLDN4|1364|claudin 4##AB000712|CLDN4|1364|claudin 4##NM_000501|ELN|2006|elastin##NM_001081752|ELN|2006|elastin##NM_001081753|ELN|2006|elastin##NM_001081754|ELN|2006|elastin##NM_001081755|ELN|2006|elastin##AK075554|ELN|2006|elastin##AK075494|ELN|2006|elastin##AK125511|ELN|2006|elastin##AK130894|ELN|2006|elastin##M36860|ELN|2006|elastin##X52896|ELN|2006|elastin	0.020615	
chr8	54764152	54764268	reg1039429.p1	3.854	+	AF113222 TSC_hg19_v1_chr8_-_54755840 NM_015941 NM_213619 AK303229	-8358	-	AK022345 TSC_hg19_v1_chr8_-_54755834	-8383	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	-8531	-	AY046538 NM_170587 AF366054 AF366055 AF366056	203	+	TSC_hg19_v1_chr8_+_54793431 AK094503 BC063490 NM_003702 BC054867 BC018618 BC031328	29242	+	TSC_hg19_v1_chr8_+_54793579 AF060877 HQ257937 BC015614	29352	+	AF113222|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_015941|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213619|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK303229|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AY046538|RGS20|8601|regulator of G-protein signaling 20##NM_170587|RGS20|8601|regulator of G-protein signaling 20##AF366054|RGS20|8601|regulator of G-protein signaling 20##AF366055|RGS20|8601|regulator of G-protein signaling 20##AF366056|RGS20|8601|regulator of G-protein signaling 20##AK094503|RGS20|8601|regulator of G-protein signaling 20##BC063490|RGS20|8601|regulator of G-protein signaling 20##NM_003702|RGS20|8601|regulator of G-protein signaling 20##BC018618|RGS20|8601|regulator of G-protein signaling 20##BC031328|RGS20|8601|regulator of G-protein signaling 20##AF060877|RGS20|8601|regulator of G-protein signaling 20##HQ257937|RGS20|8601|regulator of G-protein signaling 20##BC015614|RGS20|8601|regulator of G-protein signaling 20	0.552641	CTCF.p2:-10:0.553
chr9	108014164	108014277	reg1033797.p2	3.854	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	-7153	+	TSC_hg19_v1_chr9_+_108006937 AJ272365	-7269	+	TSC_hg19_v1_chr9_+_108006931 NM_080546	-7307	+	AK309817 TSC_hg19_v1_chr9_+_108210342 NM_001145313 NM_031919 NM_207647 AF088031 AK299350 AK296433 AK299491 AF316830	196043	+	TSC_hg19_v1_chr9_+_108320420 NM_001079802 NM_001198963 NM_006731 AK300840 AK304460 BC058842 AB008226 AB609007	306203	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	410537	+	AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1##AJ272365|SLC44A1|23446|solute carrier family 44, member 1##NM_080546|SLC44A1|23446|solute carrier family 44, member 1##AK309817|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001145313|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_031919|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_207647|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF088031|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299350|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK296433|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299491|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF316830|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001079802|FKTN|2218|fukutin##NM_001198963|FKTN|2218|fukutin##NM_006731|FKTN|2218|fukutin##AK300840|FKTN|2218|fukutin##AK304460|FKTN|2218|fukutin##BC058842|FKTN|2218|fukutin##AB008226|FKTN|2218|fukutin##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2	0.058337	
chrX	96653176	96653246	reg1030621.p1	3.854	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	-514241	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	-713257	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	-713460	+	EF676096 NM_001105243 NM_001184880 NM_020766 TSC_hg19_v1_chrX_-_99665272	3012062	-	NM_022144 AF191770 BC034030 AF291656 AF234259 AY358706 AB055421 AB590911 CU689814	3186690	+	BT006977 CR457115 AB527646 DQ890668 DQ893849 TSC_hg19_v1_chrX_-_99891804 AF053453 AK299176 AF133426 AK309581 AY358825 AB097016 AF043906 U84895 BC012389 NM_003270 AK075072 AB209876 AK315773 AK300852	3238557	-	NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##EF676096|PCDH19|57526|protocadherin 19##NM_001105243|PCDH19|57526|protocadherin 19##NM_001184880|PCDH19|57526|protocadherin 19##NM_020766|PCDH19|57526|protocadherin 19##NM_022144|TNMD|64102|tenomodulin##AF191770|TNMD|64102|tenomodulin##BC034030|TNMD|64102|tenomodulin##AF291656|TNMD|64102|tenomodulin##AF234259|TNMD|64102|tenomodulin##AY358706|TNMD|64102|tenomodulin##AB055421|TNMD|64102|tenomodulin##BT006977|TSPAN6|7105|tetraspanin 6##CR457115|TSPAN6|7105|tetraspanin 6##DQ890668|TSPAN6|7105|tetraspanin 6##DQ893849|TSPAN6|7105|tetraspanin 6##AF053453|TSPAN6|7105|tetraspanin 6##AK299176|TSPAN6|7105|tetraspanin 6##AF133426|TSPAN6|7105|tetraspanin 6##AK309581|TSPAN6|7105|tetraspanin 6##AY358825|TSPAN6|7105|tetraspanin 6##AB097016|TSPAN6|7105|tetraspanin 6##AF043906|TSPAN6|7105|tetraspanin 6##U84895|TSPAN6|7105|tetraspanin 6##BC012389|TSPAN6|7105|tetraspanin 6##NM_003270|TSPAN6|7105|tetraspanin 6##AK075072|TSPAN6|7105|tetraspanin 6##AB209876|TSPAN6|7105|tetraspanin 6##AK315773|TSPAN6|7105|tetraspanin 6##AK300852|TSPAN6|7105|tetraspanin 6	0.0	
chr10	80198004	80198113	reg1030492.p2	3.853	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-404427	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-404502	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-408744	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	630730	+	TSC_hg19_v1_chr10_+_80899458 AK025812	701426	+	TSC_hg19_v1_chr10_+_81003207 AB033050	805072	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.997679	CTCF.p2:0:0.998
chr12	93560723	93560883	reg1035227.p1	3.853	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-237705	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-237760	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	-237865	-	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	211089	+	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	274883	-	TSC_hg19_v1_chr12_-_93835718 D83004	274915	-	NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.0	
chr13	42002412	42002519	reg1034772.p1	3.853	+	NM_001110798 NM_018527 NM_024561 TSC_hg19_v1_chr13_+_41885376 BC064592 BC032318 AK291248 AK097224 BX640665 BC101719 BC101721 BC143506 CU689326	-116963	+	AK055086 AF072934 TSC_hg19_v1_chr13_-_41837713 BC027731 BC038427 BC042196 BC065496 NM_004294 AK294343	-164785	-	TSC_hg19_v1_chr13_-_41768706 AK299614 AL136782 AK315589 BC022033 FJ150424 NM_032138 AK091344 AX746923	-233840	-	TSC_hg19_v1_chr13_+_42031539 NM_014059	29086	+	TSC_hg19_v1_chr13_+_42031685 BC066334	29218	+	TSC_hg19_v1_chr13_+_42031690 BC038706 AF036549	29235	+	NM_001110798|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_018527|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_024561|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC064592|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC032318|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK291248|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK097224|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BX640665|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101719|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101721|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC143506|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK055086|MTRF1|9617|mitochondrial translational release factor 1##AF072934|MTRF1|9617|mitochondrial translational release factor 1##BC027731|MTRF1|9617|mitochondrial translational release factor 1##BC038427|MTRF1|9617|mitochondrial translational release factor 1##BC042196|MTRF1|9617|mitochondrial translational release factor 1##BC065496|MTRF1|9617|mitochondrial translational release factor 1##NM_004294|MTRF1|9617|mitochondrial translational release factor 1##AK294343|MTRF1|9617|mitochondrial translational release factor 1##AK299614|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AL136782|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK315589|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##BC022033|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##FJ150424|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_032138|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK091344|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15##BC066334|C13orf15|28984|chromosome 13 open reading frame 15##BC038706|C13orf15|28984|chromosome 13 open reading frame 15##AF036549|C13orf15|28984|chromosome 13 open reading frame 15	0.0	
chr14	50503791	50503870	reg1038348.p1	3.853	+	AK091232 AX746864 NM_001012706	-29593	-	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-143424	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-143997	+	AF390030 NM_001014830	55530	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	79440	-	TSC_hg19_v1_chr14_-_50697940 L13858 HQ258542 AB463275 BC117261 BC143366 BC143367	194153	-	AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D##L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)##HQ258542|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)	0.0	
chr14	52766704	52766787	reg1003784.p2	3.853	+	BC040968 NM_000953 AB464671 EF577397	-32264	+	NM_007361 TSC_hg19_v1_chr14_-_52536023	-230760	-	BC035608 TSC_hg19_v1_chr14_-_52535777 AK291652	-230971	-	TSC_hg19_v1_chr14_+_52781029 NM_000956 U19487 BC093927 BC093929 AY275471 X83868	14390	+	TSC_hg19_v1_chr14_-_53019222 AK097748 BC137081 BC137082 BC144469 AB037765 BC152428 BC150205 BC142650 NM_001160047 NM_020784	252427	-	NM_001099652 AY255590 AK123953 AL834372	253190	+	BC040968|PTGDR|5729|prostaglandin D2 receptor (DP)##NM_000953|PTGDR|5729|prostaglandin D2 receptor (DP)##EF577397|PTGDR|5729|prostaglandin D2 receptor (DP)##NM_007361|NID2|22795|nidogen 2 (osteonidogen)##BC035608|NID2|22795|nidogen 2 (osteonidogen)##AK291652|NID2|22795|nidogen 2 (osteonidogen)##NM_000956|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##U19487|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##BC093927|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##BC093929|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##AY275471|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##X83868|PTGER2|5732|prostaglandin E receptor 2 (subtype EP2), 53kDa##AK097748|TXNDC16|57544|thioredoxin domain containing 16##BC137081|TXNDC16|57544|thioredoxin domain containing 16##BC137082|TXNDC16|57544|thioredoxin domain containing 16##BC144469|TXNDC16|57544|thioredoxin domain containing 16##AB037765|TXNDC16|57544|thioredoxin domain containing 16##BC152428|TXNDC16|57544|thioredoxin domain containing 16##BC150205|TXNDC16|57544|thioredoxin domain containing 16##BC142650|TXNDC16|57544|thioredoxin domain containing 16##NM_001160047|TXNDC16|57544|thioredoxin domain containing 16##NM_020784|TXNDC16|57544|thioredoxin domain containing 16##NM_001099652|GPR137C|283554|G protein-coupled receptor 137C##AY255590|GPR137C|283554|G protein-coupled receptor 137C##AK123953|GPR137C|283554|G protein-coupled receptor 137C##AL834372|GPR137C|283554|G protein-coupled receptor 137C	0.0	
chr15	63767148	63767214	reg1035062.p2	3.853	+	AK315769 NM_001218 NM_206925 TSC_hg19_v1_chr15_-_63674076	-93106	-	BT006656 DQ893188 DQ896511 EU831616 EU831623 EU831703 EU831708 AF051882 BC000278 AF037335 BC011691 TSC_hg19_v1_chr15_-_63674046 AK096845 BC023981	-93189	-	NM_001145646 NM_031301 TSC_hg19_v1_chr15_+_63569803 AK291204 AL136671 BC020905 AB189172 AB197122 AF508794 AX776001 AY358698 AB528062 AM392724 AM392878 DQ891401 CU676772 AK307725	-197368	+	TSC_hg19_v1_chr15_+_63796791 AK314223	29601	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	29696	+	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	122398	+	AK315769|CA12|771|carbonic anhydrase XII##NM_001218|CA12|771|carbonic anhydrase XII##NM_206925|CA12|771|carbonic anhydrase XII##BT006656|CA12|771|carbonic anhydrase XII##DQ893188|CA12|771|carbonic anhydrase XII##DQ896511|CA12|771|carbonic anhydrase XII##EU831616|CA12|771|carbonic anhydrase XII##EU831623|CA12|771|carbonic anhydrase XII##EU831703|CA12|771|carbonic anhydrase XII##EU831708|CA12|771|carbonic anhydrase XII##AF051882|CA12|771|carbonic anhydrase XII##BC000278|CA12|771|carbonic anhydrase XII##AF037335|CA12|771|carbonic anhydrase XII##BC011691|CA12|771|carbonic anhydrase XII##AK096845|CA12|771|carbonic anhydrase XII##BC023981|CA12|771|carbonic anhydrase XII##NM_001145646|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##NM_031301|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK291204|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AL136671|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##BC020905|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB189172|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB197122|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AF508794|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AY358698|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392724|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392878|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##DQ891401|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK307725|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK314223|USP3|9960|ubiquitin specific peptidase 3##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22	0.0	
chr15	68148317	68148431	reg1031496.p2	3.853	+	NM_001031807	-30434	+	AK293459 NM_001206804	-307033	+	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	-313352	+	AF167160 NM_016166 BC118587 BC121797 TSC_hg19_v1_chr15_+_68346652 AK314515 BC104646	198238	+	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	198287	+	TSC_hg19_v1_chr15_-_68497633 BX640702 BC009516 AK092628 AK296804 AX747637	349263	-	NM_001031807|SKOR1|390598|SKI family transcriptional corepressor 1##AK293459|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_001206804|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5##AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1##NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1##BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1##BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1##AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1##BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1##BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1##BX640702|CALML4|91860|calmodulin-like 4##BC009516|CALML4|91860|calmodulin-like 4##AK092628|CALML4|91860|calmodulin-like 4##AK296804|CALML4|91860|calmodulin-like 4	0.0	
chr17	78193677	78193770	reg1028896.p2	3.853	+	BC001326 NM_052819	-32125	+	AF322642 NM_024110 BC018142	-41435	+	CR456750 CU678566 AB383751 X79538 BC003662 BC004386 BC011151 TSC_hg19_v1_chr17_-_78120947 AK290608 NM_014740	-72853	-	TSC_hg19_v1_chr17_-_78194133 CU690396 U30894 AB209900 BC047318 AK222890 AK291257 AK304706 AK309927 AK095969 NM_000199	418	-	TSC_hg19_v1_chr17_+_78194101 NM_001166347 NM_001166348 NM_001166349 NM_173626 AJ544073 AK027293 AK075248 AK315132 AL833468 BC035900 AF345195	455	+	TSC_hg19_v1_chr17_+_78234657 AB537889 BC036891 NM_020914 NM_020954 AL832920 BC040341 AF397204 AF397205	40962	+	BC001326|CARD14|79092|caspase recruitment domain family, member 14##NM_052819|CARD14|79092|caspase recruitment domain family, member 14##AF322642|CARD14|79092|caspase recruitment domain family, member 14##NM_024110|CARD14|79092|caspase recruitment domain family, member 14##BC018142|CARD14|79092|caspase recruitment domain family, member 14##CR456750|EIF4A3|9775|eukaryotic translation initiation factor 4A3##X79538|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC003662|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC004386|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC011151|EIF4A3|9775|eukaryotic translation initiation factor 4A3##AK290608|EIF4A3|9775|eukaryotic translation initiation factor 4A3##NM_014740|EIF4A3|9775|eukaryotic translation initiation factor 4A3##U30894|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AB209900|SGSH|6448|N-sulfoglucosamine sulfohydrolase##BC047318|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK222890|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK291257|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK304706|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK309927|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK095969|SGSH|6448|N-sulfoglucosamine sulfohydrolase##NM_000199|SGSH|6448|N-sulfoglucosamine sulfohydrolase##NM_001166347|SLC26A11|284129|solute carrier family 26, member 11##NM_001166348|SLC26A11|284129|solute carrier family 26, member 11##NM_001166349|SLC26A11|284129|solute carrier family 26, member 11##NM_173626|SLC26A11|284129|solute carrier family 26, member 11##AJ544073|SLC26A11|284129|solute carrier family 26, member 11##AK027293|SLC26A11|284129|solute carrier family 26, member 11##AK075248|SLC26A11|284129|solute carrier family 26, member 11##AK315132|SLC26A11|284129|solute carrier family 26, member 11##AL833468|SLC26A11|284129|solute carrier family 26, member 11##BC035900|SLC26A11|284129|solute carrier family 26, member 11##AF345195|SLC26A11|284129|solute carrier family 26, member 11##AB537889|RNF213|57674|ring finger protein 213##BC036891|RNF213|57674|ring finger protein 213##NM_020914|RNF213|57674|ring finger protein 213##NM_020954|RNF213|57674|ring finger protein 213##AL832920|RNF213|57674|ring finger protein 213##BC040341|RNF213|57674|ring finger protein 213##AF397204|RNF213|57674|ring finger protein 213##AF397205|RNF213|57674|ring finger protein 213	0.0	
chr18	59992377	59992460	reg1036045.p1	3.853	+	TSC_hg19_v1_chr18_+_59855176 AB384606	-137208	+	TSC_hg19_v1_chr18_+_59854540 BX648481	-137830	+	TSC_hg19_v1_chr18_+_59854521 AK091160 AX746817 NM_020854	-137893	+	AB209762 AF018253 NM_003839 AB527346	132	+	NM_017742 TSC_hg19_v1_chr18_+_60190696 BC006340	198336	+	TSC_hg19_v1_chr18_+_60382695 NM_194449	390246	+	BX648481|KIAA1468|57614|KIAA1468##AK091160|KIAA1468|57614|KIAA1468##NM_020854|KIAA1468|57614|KIAA1468##AB209762|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##AF018253|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_003839|TNFRSF11A|8792|tumor necrosis factor receptor superfamily, member 11a, NFKB activator##NM_017742|ZCCHC2|54877|zinc finger, CCHC domain containing 2##BC006340|ZCCHC2|54877|zinc finger, CCHC domain containing 2##NM_194449|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1	0.25137	CTCF.p2:32:0.251
chr19	48794306	48794487	reg1001766.p1	3.853	+	AK075062 NM_153608	-19743	+	TSC_hg19_v1_chr19_-_48759141 BC056891 BC034564 BC046136 NM_001184902 NM_001184904	-35225	-	AK125548 TSC_hg19_v1_chr19_+_48758936 BC060888 BC008448 BC033836	-35447	+	BC007730 NM_144577	28935	-	TSC_hg19_v1_chr19_-_48825152 AK128144	30774	-	TSC_hg19_v1_chr19_+_48828629 NM_001425 U87947	34244	+	AK075062|ZNF114|163071|zinc finger protein 114##NM_153608|ZNF114|163071|zinc finger protein 114##BC056891|CARD8|22900|caspase recruitment domain family, member 8##BC034564|CARD8|22900|caspase recruitment domain family, member 8##BC046136|CARD8|22900|caspase recruitment domain family, member 8##NM_001184902|CARD8|22900|caspase recruitment domain family, member 8##NM_001184904|CARD8|22900|caspase recruitment domain family, member 8##AK125548|LOC100505812|100505812|uncharacterized LOC100505812##BC060888|LOC100505812|100505812|uncharacterized LOC100505812##BC007730|CCDC114|93233|coiled-coil domain containing 114##NM_144577|CCDC114|93233|coiled-coil domain containing 114##AK128144|CCDC114|93233|coiled-coil domain containing 114##NM_001425|EMP3|2014|epithelial membrane protein 3##U87947|EMP3|2014|epithelial membrane protein 3	0.0	
chr2	164011934	164012054	reg1033373.p1	3.853	+	BC035815 TSC_hg19_v1_chr2_-_163695255 NM_033272 NM_173162	-316747	-	CU690212 AF032897 TSC_hg19_v1_chr2_-_163695217	-316870	-	TSC_hg19_v1_chr2_+_163200633 AK312349 M81637 BC005214 AB209768 AB529141 CU675051 AK295413	-811233	+	BX649105 NM_018086 TSC_hg19_v1_chr2_-_164592519 AK125324	580523	-	AK309590 TSC_hg19_v1_chr2_-_165424995 AK301961 AK302129	1413010	-	AB527527 EU832411 BC053559 TSC_hg19_v1_chr2_-_165477962	1465899	-	BC035815|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_033272|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##NM_173162|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AF032897|KCNH7|90134|potassium voltage-gated channel, subfamily H (eag-related), member 7##AK312349|GCA|25801|grancalcin, EF-hand calcium binding protein##M81637|GCA|25801|grancalcin, EF-hand calcium binding protein##BC005214|GCA|25801|grancalcin, EF-hand calcium binding protein##AB209768|GCA|25801|grancalcin, EF-hand calcium binding protein##AK295413|GCA|25801|grancalcin, EF-hand calcium binding protein##BX649105|FIGN|55137|fidgetin##NM_018086|FIGN|55137|fidgetin##AK125324|FIGN|55137|fidgetin##AK309590|GRB14|2888|growth factor receptor-bound protein 14##AK301961|GRB14|2888|growth factor receptor-bound protein 14##AK302129|GRB14|2888|growth factor receptor-bound protein 14##EU832411|GRB14|2888|growth factor receptor-bound protein 14##BC053559|GRB14|2888|growth factor receptor-bound protein 14	0.998396	CTCF.p2:-7:0.998
chr5	55291247	55291428	reg1035792.p1	3.853	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-574	-	NM_001242636 NM_001242639	-142188	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-144068	+	AK123389 NM_024669	237848	-	NM_005921	819562	+	TSC_hg19_v1_chr5_+_56111375 AK307828	820027	+	BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr6	43111521	43111599	reg1001712.p2	3.853	+	TSC_hg19_v1_chr6_+_43044048 NM_002821 NM_152880 NM_152881 NM_152882 U33635 BC071557 BC002377 BC014626 AK292589 AF531868 AF531869 AF531870 AF531871 AF531872 U40271 AB209350 AK291016	-67483	+	NM_201522 AK127894	-83322	+	AK094102 NM_201523 AK055293 BX640717	-83930	+	NM_003131 TSC_hg19_v1_chr6_+_43139027 BC052572 J03161	27493	+	TSC_hg19_v1_chr6_+_43139192 BC048211	27633	+	TSC_hg19_v1_chr6_+_43139204 AB209128 AB464198	27733	+	NM_002821|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152880|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152881|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152882|PTK7|5754|PTK7 protein tyrosine kinase 7##U33635|PTK7|5754|PTK7 protein tyrosine kinase 7##BC071557|PTK7|5754|PTK7 protein tyrosine kinase 7##BC002377|PTK7|5754|PTK7 protein tyrosine kinase 7##BC014626|PTK7|5754|PTK7 protein tyrosine kinase 7##AK292589|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531868|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531869|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531870|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531871|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531872|PTK7|5754|PTK7 protein tyrosine kinase 7##U40271|PTK7|5754|PTK7 protein tyrosine kinase 7##AB209350|PTK7|5754|PTK7 protein tyrosine kinase 7##AK291016|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_201522|KLC4|89953|kinesin light chain 4##AK127894|KLC4|89953|kinesin light chain 4##AK094102|KLC4|89953|kinesin light chain 4##NM_201523|KLC4|89953|kinesin light chain 4##AK055293|KLC4|89953|kinesin light chain 4##BX640717|KLC4|89953|kinesin light chain 4##NM_003131|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC052572|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##J03161|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC048211|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##AB209128|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)	0.0	
chr8	100819037	100819138	reg1037294.p1	3.853	+	TSC_hg19_v1_chr8_+_100025537 BC094749	-793497	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	-793575	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	-793592	+	TSC_hg19_v1_chr8_-_100905892 X13238	86792	-	TSC_hg19_v1_chr8_-_100905910 AK311791	86834	-	NM_004374	87154	-	BC094749|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##X13238|COX6C|1345|cytochrome c oxidase subunit VIc##AK311791|COX6C|1345|cytochrome c oxidase subunit VIc##NM_004374|COX6C|1345|cytochrome c oxidase subunit VIc	0.228571	CTCF.p2:8:0.229
chr10	45950380	45950446	reg1030140.p1	3.852	+	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	-80716	+	TSC_hg19_v1_chr10_+_45869638 AB208946 NM_000698 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223	-80776	+	AK131555 NM_001004297	-139358	-	AK313340 BC025394 NM_001002266 AK307667	80406	-	TSC_hg19_v1_chr10_-_46090318 BC066988 NM_001002265 NM_145021	139881	-	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	217801	-	BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase##AB208946|ALOX5|240|arachidonate 5-lipoxygenase##NM_000698|ALOX5|240|arachidonate 5-lipoxygenase##AK225603|ALOX5|240|arachidonate 5-lipoxygenase##BC130332|ALOX5|240|arachidonate 5-lipoxygenase##BC132677|ALOX5|240|arachidonate 5-lipoxygenase##BC143985|ALOX5|240|arachidonate 5-lipoxygenase##BC143986|ALOX5|240|arachidonate 5-lipoxygenase##AK315223|ALOX5|240|arachidonate 5-lipoxygenase##AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##AK313340|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC025394|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002266|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK307667|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC066988|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002265|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_145021|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4	0.0	
chr1	199015973	199016144	reg1033869.p2	3.852	+	TSC_hg19_v1_chr1_-_198906559 EF413001	-109511	-	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-407728	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-407833	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	980811	+	AK316513 TSC_hg19_v1_chr1_+_200011716	995666	+	NM_001105517	1166597	+	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene	0.0	
chr1	203297284	203297358	reg1018305.p2	3.852	+	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	-22632	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-98506	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-141395	-	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	20063	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	22888	-	AK172740 TSC_hg19_v1_chr1_-_203320256	22940	-	NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.112341	
chr1	228290111	228290215	reg1028788.p1	3.852	+	TSC_hg19_v1_chr1_+_228285600 BC010415	-4523	+	TSC_hg19_v1_chr1_+_228270837 NM_001024227 NM_001024228	-19337	+	TSC_hg19_v1_chr1_+_228270448 AK130737 M36340 AF055002 M84326 AK057838 BC010429 AK296020 BC009247	-19723	+	EU832643 EU832720 TSC_hg19_v1_chr1_-_228291006 BC062585 BC002843 NM_024319 AY137773	819	-	TSC_hg19_v1_chr1_-_228291059 AK123377	940	-	TSC_hg19_v1_chr1_-_228297001 BC052806 BX647745 AK056987 NM_181441 NM_181454 NM_181455 NM_181456 NM_181462 NM_181463 NM_181464 NM_181465	6826	-	BC010415|ARF1|375|ADP-ribosylation factor 1##NM_001024227|ARF1|375|ADP-ribosylation factor 1##NM_001024228|ARF1|375|ADP-ribosylation factor 1##AK130737|ARF1|375|ADP-ribosylation factor 1##M36340|ARF1|375|ADP-ribosylation factor 1##AF055002|ARF1|375|ADP-ribosylation factor 1##M84326|ARF1|375|ADP-ribosylation factor 1##AK057838|ARF1|375|ADP-ribosylation factor 1##BC010429|ARF1|375|ADP-ribosylation factor 1##AK296020|ARF1|375|ADP-ribosylation factor 1##BC009247|ARF1|375|ADP-ribosylation factor 1##EU832643|C1orf35|79169|chromosome 1 open reading frame 35##EU832720|C1orf35|79169|chromosome 1 open reading frame 35##BC062585|C1orf35|79169|chromosome 1 open reading frame 35##BC002843|C1orf35|79169|chromosome 1 open reading frame 35##NM_024319|C1orf35|79169|chromosome 1 open reading frame 35##AY137773|C1orf35|79169|chromosome 1 open reading frame 35##AK123377|C1orf35|79169|chromosome 1 open reading frame 35##BC052806|MRPL55|128308|mitochondrial ribosomal protein L55##BX647745|MRPL55|128308|mitochondrial ribosomal protein L55##AK056987|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181441|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181454|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181455|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181456|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181462|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181463|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181464|MRPL55|128308|mitochondrial ribosomal protein L55##NM_181465|MRPL55|128308|mitochondrial ribosomal protein L55	0.733188	CTCF.p2:-4:0.733
chr14	89133796	89133906	reg1011571.p1	3.852	+	NM_207662 BC027607 AF474376	-73098	+	AL834215 AY578062 NM_207661	-104161	+	TSC_hg19_v1_chr14_+_89029392 BX640716 AK304275 BC011793 AK021868	-104455	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	125359	-	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	157142	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	744925	-	NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##AL834215|ZC3H14|79882|zinc finger CCCH-type containing 14##AY578062|ZC3H14|79882|zinc finger CCCH-type containing 14##NM_207661|ZC3H14|79882|zinc finger CCCH-type containing 14##BX640716|ZC3H14|79882|zinc finger CCCH-type containing 14##AK304275|ZC3H14|79882|zinc finger CCCH-type containing 14##BC011793|ZC3H14|79882|zinc finger CCCH-type containing 14##AK021868|ZC3H14|79882|zinc finger CCCH-type containing 14##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3	0.0	
chr1	61665800	61665895	reg1028975.p1	3.852	+	TSC_hg19_v1_chr1_+_61548292 AB037860 NM_001134673 NM_005595 AK299356 BC022264 CU692518 DQ893250 DQ896579	-117789	+	TSC_hg19_v1_chr1_+_61547427 AK299579 NM_001145512	-118387	+	TSC_hg19_v1_chr1_+_61542928 AK299289 NM_001145511	-122911	+	TSC_hg19_v1_chr1_+_61869699 AK024964	203876	+	TSC_hg19_v1_chr1_+_61924622 AK096483	258845	+	AK311444 AK311705 TSC_hg19_v1_chr1_-_62190802 CU688668	524924	-	AB037860|NFIA|4774|nuclear factor I/A##NM_001134673|NFIA|4774|nuclear factor I/A##NM_005595|NFIA|4774|nuclear factor I/A##AK299356|NFIA|4774|nuclear factor I/A##BC022264|NFIA|4774|nuclear factor I/A##DQ893250|NFIA|4774|nuclear factor I/A##DQ896579|NFIA|4774|nuclear factor I/A##AK299579|NFIA|4774|nuclear factor I/A##NM_001145512|NFIA|4774|nuclear factor I/A##AK299289|NFIA|4774|nuclear factor I/A##NM_001145511|NFIA|4774|nuclear factor I/A##AK024964|NFIA|4774|nuclear factor I/A##AK096483|NFIA|4774|nuclear factor I/A##AK311444|TM2D1|83941|TM2 domain containing 1##AK311705|TM2D1|83941|TM2 domain containing 1	0.433025	CTCF.p2:-15:0.433
chr16	29749990	29750121	reg1031965.p2	3.852	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-59573	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-59661	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-75041	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	7246	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	39531	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	51996	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.0	
chr16	73235558	73235641	reg1039234.p1	3.852	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-143013	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-153378	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-243894	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	1095094	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	1095172	+	TSC_hg19_v1_chr16_-_74401811 AK124154	1166213	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.0	
chr17	47271439	47271607	reg1033451.p2	3.852	+	AF510036 AJ517770 NM_153446 BC113675 BC113677 HQ258321 HQ258467	-61166	+	TSC_hg19_v1_chr17_+_47210130 NM_001159387 AJ517771	-61423	+	AK302876 NM_001159388	-61702	+	BC008663 NM_031498 AK312839 NM_001198755 NM_001198756	15228	-	AB037886 NM_001135186 NM_016428	16065	+	NM_001198754	16412	-	AF510036|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517770|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_153446|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113675|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113677|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258321|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258467|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159387|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517771|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AK302876|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159388|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC008663|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##NM_031498|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AK312839|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##NM_001198755|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##NM_001198756|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AB037886|ABI3|51225|ABI family, member 3##NM_001135186|ABI3|51225|ABI family, member 3##NM_016428|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2	0.0	
chr17	4860103	4860215	reg1033174.p1	3.852	+	NM_001193503 NM_001976 NM_053013 TSC_hg19_v1_chr17_+_4854406 AK300662 AK300673 AK300709 AK309864 BC017249	-5755	+	TSC_hg19_v1_chr17_-_4851828 BC057828	-8315	-	TSC_hg19_v1_chr17_-_4851824 BC006768 BC013439 BC002475 J03191 BC015164 AK312168 D28377 NM_005022	-8349	-	BC007819 BC011934 TSC_hg19_v1_chr17_-_4871113 AF047437 AK312174 NM_004890	10952	-	AL831849 NM_001171167 NM_001171168 TSC_hg19_v1_chr17_-_4890732	30541	-	AB020716 BC167148 BC167149 BC167151 BC167160 EU832136 EU832229 TSC_hg19_v1_chr17_-_4890947 AK302528 AL833974 BC142695 NM_001171166 NM_015099	30793	-	NM_001193503|ENO3|2027|enolase 3 (beta, muscle)##NM_001976|ENO3|2027|enolase 3 (beta, muscle)##NM_053013|ENO3|2027|enolase 3 (beta, muscle)##AK300662|ENO3|2027|enolase 3 (beta, muscle)##AK300673|ENO3|2027|enolase 3 (beta, muscle)##AK300709|ENO3|2027|enolase 3 (beta, muscle)##AK309864|ENO3|2027|enolase 3 (beta, muscle)##BC017249|ENO3|2027|enolase 3 (beta, muscle)##BC057828|PFN1|5216|profilin 1##BC006768|PFN1|5216|profilin 1##BC013439|PFN1|5216|profilin 1##BC002475|PFN1|5216|profilin 1##J03191|PFN1|5216|profilin 1##BC015164|PFN1|5216|profilin 1##AK312168|PFN1|5216|profilin 1##D28377|PFN1|5216|profilin 1##NM_005022|PFN1|5216|profilin 1##BC007819|SPAG7|9552|sperm associated antigen 7##BC011934|SPAG7|9552|sperm associated antigen 7##AF047437|SPAG7|9552|sperm associated antigen 7##AK312174|SPAG7|9552|sperm associated antigen 7##NM_004890|SPAG7|9552|sperm associated antigen 7##AL831849|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171167|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171168|CAMTA2|23125|calmodulin binding transcription activator 2##AB020716|CAMTA2|23125|calmodulin binding transcription activator 2##BC167148|CAMTA2|23125|calmodulin binding transcription activator 2##BC167149|CAMTA2|23125|calmodulin binding transcription activator 2##BC167151|CAMTA2|23125|calmodulin binding transcription activator 2##BC167160|CAMTA2|23125|calmodulin binding transcription activator 2##EU832136|CAMTA2|23125|calmodulin binding transcription activator 2##EU832229|CAMTA2|23125|calmodulin binding transcription activator 2##AK302528|CAMTA2|23125|calmodulin binding transcription activator 2##AL833974|CAMTA2|23125|calmodulin binding transcription activator 2##BC142695|CAMTA2|23125|calmodulin binding transcription activator 2##NM_001171166|CAMTA2|23125|calmodulin binding transcription activator 2##NM_015099|CAMTA2|23125|calmodulin binding transcription activator 2	0.546965	CTCF.p2:-14:0.547
chr17	7826167	7826293	reg1031406.p1	3.852	+	TSC_hg19_v1_chr17_+_7812703 AK096555	-13470	+	TSC_hg19_v1_chr17_+_7792039 AF006515 NM_001005273 NM_005852 U91543	-34129	+	TSC_hg19_v1_chr17_+_7788113 NM_001005271	-38119	+	AF016411 BC096232 BC096233 BC096234 BC099634 NM_004732	6522	-	AB528455 DQ890860 DQ894015 BC025413 TSC_hg19_v1_chr17_-_7835265 BC032717 AK314038 NM_021210 NM_001166621	9030	-	NM_001037144 NM_053051 AY160226 AY160227 TSC_hg19_v1_chr17_+_7835522 AK293076 AF331638 BC021134 AL833907	9299	+	AK096555|CHD3|1107|chromodomain helicase DNA binding protein 3##NM_001005273|CHD3|1107|chromodomain helicase DNA binding protein 3##NM_005852|CHD3|1107|chromodomain helicase DNA binding protein 3##U91543|CHD3|1107|chromodomain helicase DNA binding protein 3##NM_001005271|CHD3|1107|chromodomain helicase DNA binding protein 3##AF016411|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096232|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096233|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC096234|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##BC099634|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##NM_004732|KCNAB3|9196|potassium voltage-gated channel, shaker-related subfamily, beta member 3##DQ890860|TRAPPC1|58485|trafficking protein particle complex 1##DQ894015|TRAPPC1|58485|trafficking protein particle complex 1##BC025413|TRAPPC1|58485|trafficking protein particle complex 1##BC032717|TRAPPC1|58485|trafficking protein particle complex 1##AK314038|TRAPPC1|58485|trafficking protein particle complex 1##NM_021210|TRAPPC1|58485|trafficking protein particle complex 1##NM_001166621|TRAPPC1|58485|trafficking protein particle complex 1##NM_001037144|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##NM_053051|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160226|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AY160227|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AK293076|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AF331638|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##BC021134|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein##AL833907|CNTROB|116840|centrobin, centrosomal BRCA2 interacting protein	0.048206	
chr19	1221595	1221706	reg1032735.p1	3.852	+	BC146278 BC148727 TSC_hg19_v1_chr19_+_1207211	-14477	+	BC007981 AF035625 BC019334 AK314858 AB209553 EF644172 DQ893232 DQ896561 AB528360 CU675883 U63333 TSC_hg19_v1_chr19_+_1206921	-14959	+	TSC_hg19_v1_chr19_+_1205777 NM_000455 AF217978	-15844	+	BC028156 NM_152769	16264	-	TSC_hg19_v1_chr19_+_1241763 BC002389 BC004426 BC018817 NM_001001975 NM_001687	20102	+	AK094357 S87916 S87918 X63422 X63423 TSC_hg19_v1_chr19_+_1241766	20116	+	BC146278|EFNA2|1943|ephrin-A2##BC148727|EFNA2|1943|ephrin-A2##BC007981|STK11|6794|serine/threonine kinase 11##AF035625|STK11|6794|serine/threonine kinase 11##BC019334|STK11|6794|serine/threonine kinase 11##AK314858|STK11|6794|serine/threonine kinase 11##AB209553|STK11|6794|serine/threonine kinase 11##EF644172|STK11|6794|serine/threonine kinase 11##DQ893232|STK11|6794|serine/threonine kinase 11##DQ896561|STK11|6794|serine/threonine kinase 11##U63333|STK11|6794|serine/threonine kinase 11##NM_000455|STK11|6794|serine/threonine kinase 11##AF217978|STK11|6794|serine/threonine kinase 11##BC028156|C19orf26|255057|chromosome 19 open reading frame 26##NM_152769|C19orf26|255057|chromosome 19 open reading frame 26##BC002389|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC004426|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC018817|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001001975|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001687|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##AK094357|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87916|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87918|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63422|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63423|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit	0.867256	CTCF.p2:13:0.758
chr6	13328942	13329107	reg1033753.p2	3.852	+	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	-324	-	AK091836 AX747210 NM_001242698	-33207	-	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-611981	+	AK027010 NM_001242630	79344	-	AK055131 AF264036 NM_001242628	157374	-	TSC_hg19_v1_chr6_-_13487051 BC148295 BC119005 BC124557	158073	-	AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AK055131|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF264036|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242628|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC148295|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC119005|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC124557|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr7	107302122	107302232	reg1036238.p2	3.852	+	AF030880 NM_000441	-1098	+	NM_001008405 BT006981 CU678973	-80967	+	TSC_hg19_v1_chr7_+_107220690 AK289401 AK294824 BC008478 BX647653 AF126020	-81505	+	BC052342 BC037315 BC047092 BC022493 TSC_hg19_v1_chr7_-_107302278	39	-	AK293352 NM_024814	82101	+	TSC_hg19_v1_chr7_+_107384589 AK026762 AK307992 BC130529 BC130531 BC144176	82404	+	AF030880|SLC26A4|5172|solute carrier family 26, member 4##NM_000441|SLC26A4|5172|solute carrier family 26, member 4##NM_001008405|BCAP29|55973|B-cell receptor-associated protein 29##BT006981|BCAP29|55973|B-cell receptor-associated protein 29##AK289401|BCAP29|55973|B-cell receptor-associated protein 29##AK294824|BCAP29|55973|B-cell receptor-associated protein 29##BC008478|BCAP29|55973|B-cell receptor-associated protein 29##BX647653|BCAP29|55973|B-cell receptor-associated protein 29##AF126020|BCAP29|55973|B-cell receptor-associated protein 29##BC052342|LOC286002|286002|uncharacterized LOC286002##BC037315|LOC286002|286002|uncharacterized LOC286002##BC047092|LOC286002|286002|uncharacterized LOC286002##BC022493|LOC286002|286002|uncharacterized LOC286002##AK293352|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##NM_024814|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK026762|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK307992|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC130529|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC130531|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC144176|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1	0.0	
chr7	97896283	97896420	reg1034898.p1	3.852	+	TSC_hg19_v1_chr7_-_97881512 AK292996 BC053591 NM_015395 AK057048	-14852	-	BC113394 BC113396 NM_177455 AB464465	-54760	+	TSC_hg19_v1_chr7_+_97736173 AB029002 BC146773 NM_014916 BC131504 AB384558 AB590084 AY130988	-160015	+	NM_001159491 NM_015379 TSC_hg19_v1_chr7_+_97910997 AB055977 BC018737 AF041430 BC062370 BC071992	14648	+	TSC_hg19_v1_chr7_+_97911041 AF106966 HQ257947	14713	+	TSC_hg19_v1_chr7_-_98015920 D28374	119563	-	AK292996|TECPR1|25851|tectonin beta-propeller repeat containing 1##BC053591|TECPR1|25851|tectonin beta-propeller repeat containing 1##NM_015395|TECPR1|25851|tectonin beta-propeller repeat containing 1##AK057048|TECPR1|25851|tectonin beta-propeller repeat containing 1##BC113394|BHLHA15|168620|basic helix-loop-helix family, member a15##BC113396|BHLHA15|168620|basic helix-loop-helix family, member a15##NM_177455|BHLHA15|168620|basic helix-loop-helix family, member a15##AB029002|LMTK2|22853|lemur tyrosine kinase 2##BC146773|LMTK2|22853|lemur tyrosine kinase 2##NM_014916|LMTK2|22853|lemur tyrosine kinase 2##BC131504|LMTK2|22853|lemur tyrosine kinase 2##AY130988|LMTK2|22853|lemur tyrosine kinase 2##NM_001159491|BRI3|25798|brain protein I3##NM_015379|BRI3|25798|brain protein I3##AB055977|BRI3|25798|brain protein I3##BC018737|BRI3|25798|brain protein I3##AF041430|BRI3|25798|brain protein I3##BC062370|BRI3|25798|brain protein I3##AF106966|BRI3|25798|brain protein I3##HQ257947|BRI3|25798|brain protein I3##D28374|RPS3A|6189|ribosomal protein S3A	0.843261	CTCF.p2:-14:0.843
chr16	10906489	10906668	reg1033102.p2	3.851	+	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-68874	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-117813	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	-232088	-	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	5970	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	64534	+	BC071683 TSC_hg19_v1_chr16_-_11036171	129588	-	AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)	0.0	
chr17	7298382	7298462	reg1034959.p2	3.851	+	BC014989 NM_001201576 NM_020360	-262	-	AK124006 AF289602 BC028080 TSC_hg19_v1_chr17_-_7297842 AK098229 AK075188 AK314643 BC093026 AF159442	-565	-	NM_001251902 NM_003985 AK311063 AK225403 AK310684 U43408	-14072	+	AK290117 TSC_hg19_v1_chr17_-_7307417 AK055822 BC030270 NM_152766	9012	-	AF376802 NM_020795	13079	+	AK097400 BC033882 NM_199339 CU689788	25250	+	NM_001201576|PLSCR3|57048|phospholipid scramblase 3##NM_020360|PLSCR3|57048|phospholipid scramblase 3##AK124006|PLSCR3|57048|phospholipid scramblase 3##AF289602|PLSCR3|57048|phospholipid scramblase 3##BC028080|PLSCR3|57048|phospholipid scramblase 3##AK098229|PLSCR3|57048|phospholipid scramblase 3##AK075188|PLSCR3|57048|phospholipid scramblase 3##AK314643|PLSCR3|57048|phospholipid scramblase 3##BC093026|PLSCR3|57048|phospholipid scramblase 3##AF159442|PLSCR3|57048|phospholipid scramblase 3##NM_001251902|TNK1|8711|tyrosine kinase, non-receptor, 1##NM_003985|TNK1|8711|tyrosine kinase, non-receptor, 1##AK311063|TNK1|8711|tyrosine kinase, non-receptor, 1##AK225403|TNK1|8711|tyrosine kinase, non-receptor, 1##AK310684|TNK1|8711|tyrosine kinase, non-receptor, 1##U43408|TNK1|8711|tyrosine kinase, non-receptor, 1##AK290117|C17orf61-PLSCR3|100529211|C17orf61-PLSCR3 readthrough##AK055822|C17orf61-PLSCR3|100529211|C17orf61-PLSCR3 readthrough##BC030270|C17orf61|254863|chromosome 17 open reading frame 61##NM_152766|C17orf61|254863|chromosome 17 open reading frame 61##AF376802|NLGN2|57555|neuroligin 2##NM_020795|NLGN2|57555|neuroligin 2##AK097400|SPEM1|374768|spermatid maturation 1##BC033882|SPEM1|374768|spermatid maturation 1##NM_199339|SPEM1|374768|spermatid maturation 1	0.0	
chr19	42363765	42363860	reg1013349.p2	3.851	+	AK057404 AK301822 NM_001040283 BC039266 BC029202	-14741	+	AY358726 NM_173506	-15305	-	AK298694 NM_001815 D90277 D90278 L00692 L00693 BC106728	-63260	+	BC018616 NM_001022	175	+	TSC_hg19_v1_chr19_+_42364273 BC000023	464	+	TSC_hg19_v1_chr19_+_42364325 AK311786 BC017386 D28389 M81757	518	+	AK057404|DMRTC2|63946|DMRT-like family C2##AK301822|DMRTC2|63946|DMRT-like family C2##NM_001040283|DMRTC2|63946|DMRT-like family C2##BC039266|DMRTC2|63946|DMRT-like family C2##BC029202|DMRTC2|63946|DMRT-like family C2##AY358726|LYPD4|147719|LY6/PLAUR domain containing 4##NM_173506|LYPD4|147719|LY6/PLAUR domain containing 4##NM_001815|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90277|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90278|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00692|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00693|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##BC106728|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##BC018616|RPS19|6223|ribosomal protein S19##NM_001022|RPS19|6223|ribosomal protein S19##BC000023|RPS19|6223|ribosomal protein S19##AK311786|RPS19|6223|ribosomal protein S19##BC017386|RPS19|6223|ribosomal protein S19##M81757|RPS19|6223|ribosomal protein S19	0.018866	
chr22	43191380	43191446	reg1036262.p2	3.851	+	TSC_hg19_v1_chr22_-_43117270 AK312927	-74136	-	TSC_hg19_v1_chr22_-_43116877 BC017068 GU902275 GU902276 GU902277 GU902278 GU902279 GU902280 GU902281 AK130208 NM_017436	-74558	-	AK074388 TSC_hg19_v1_chr22_-_43089917 AJ245581 CU677819 AB590407 DQ891619 DQ894811	-101506	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	61798	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	61857	-	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	61942	-	AK312927|A4GALT|53947|alpha 1,4-galactosyltransferase##BC017068|A4GALT|53947|alpha 1,4-galactosyltransferase##NM_017436|A4GALT|53947|alpha 1,4-galactosyltransferase##AK074388|A4GALT|53947|alpha 1,4-galactosyltransferase##AJ245581|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ891619|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ894811|A4GALT|53947|alpha 1,4-galactosyltransferase##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3	0.0	
chr3	31503559	31503680	reg1035428.p1	3.851	+	AL832766 NM_207359	-567467	-	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-855216	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-855597	+	TSC_hg19_v1_chr3_+_31574119 AK311488	70511	+	TSC_hg19_v1_chr3_+_31574468 AK074587	70830	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	70863	+	AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.0	
chr5	44935467	44935595	reg1040551.p1	3.851	+	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	-126504	+	AF508782 AB002097 AF411527 BC069561 CR541665 CR541688 GQ351295 HQ258011 NM_004465 U67918 BC105023 BC105021 BC143772	-546766	-	Z50101 AB385177 AM392664 AM393615 TSC_hg19_v1_chr5_+_43609371	-1326215	+	AF064876 TSC_hg19_v1_chr5_-_45695947	760360	-	AF488549 NM_021072	760688	-	AK300860 TSC_hg19_v1_chr5_-_49737200 BC059398	4801668	-	AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AF508782|FGF10|2255|fibroblast growth factor 10##AB002097|FGF10|2255|fibroblast growth factor 10##AF411527|FGF10|2255|fibroblast growth factor 10##BC069561|FGF10|2255|fibroblast growth factor 10##CR541665|FGF10|2255|fibroblast growth factor 10##CR541688|FGF10|2255|fibroblast growth factor 10##GQ351295|FGF10|2255|fibroblast growth factor 10##HQ258011|FGF10|2255|fibroblast growth factor 10##NM_004465|FGF10|2255|fibroblast growth factor 10##U67918|FGF10|2255|fibroblast growth factor 10##BC105023|FGF10|2255|fibroblast growth factor 10##BC105021|FGF10|2255|fibroblast growth factor 10##Z50101|NNT|23530|nicotinamide nucleotide transhydrogenase##AM392664|NNT|23530|nicotinamide nucleotide transhydrogenase##AM393615|NNT|23530|nicotinamide nucleotide transhydrogenase##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AK300860|EMB|133418|embigin##BC059398|EMB|133418|embigin	0.049868	
chr10	113120092	113120174	reg1009877.p1	3.850	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	-283281	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-440753	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-440773	+	AB046780 TSC_hg19_v1_chr10_-_113933602	813428	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	823372	-	BC113497 BC113499 AF312827 HQ258194 NM_058222	923319	+	NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta	0.019109	
chr1	235146652	235146817	reg1034755.p1	3.850	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-250960	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-401488	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-402876	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	145355	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	145497	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	177829	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr12	49822779	49822863	reg1030267.p1	3.850	+	TSC_hg19_v1_chr12_+_49761253 BC017767 AL833614 BC048299 AK292334 AK023202 BX648916 BC032441	-61427	+	TSC_hg19_v1_chr12_+_49760679 AK095582 NM_023071	-62132	+	BC033236 NM_024902	-81781	+	TSC_hg19_v1_chr12_+_49932842 AB033108 NM_012284 BC144254 BC150602 AB022696 AB384589	110199	+	AY336730 NM_001012300	137400	-	TSC_hg19_v1_chr12_-_49961916 AK123187 BC011794 NM_006337 BX538079 AK308581	139097	-	BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2##AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2##BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK095582|SPATS2|65244|spermatogenesis associated, serine-rich 2##NM_023071|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC033236|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##NM_024902|DNAJC22|79962|DnaJ (Hsp40) homolog, subfamily C, member 22##AB033108|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##NM_012284|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC144254|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC150602|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AB022696|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AY336730|MCRS1|10445|microspherule protein 1##NM_001012300|MCRS1|10445|microspherule protein 1##BC011794|MCRS1|10445|microspherule protein 1##NM_006337|MCRS1|10445|microspherule protein 1##BX538079|MCRS1|10445|microspherule protein 1	0.0	
chr12	51664345	51664525	reg1012088.p4	3.850	+	BC120965 BC120966 BC008712 TSC_hg19_v1_chr12_-_51663988 NM_001033873 BC001400 AK001839 NM_001031628	-350	-	TSC_hg19_v1_chr12_+_51632658 AB385271 CU677910 AK125855	-31763	+	TSC_hg19_v1_chr12_+_51632650 D31767 BC002334 BC007900 AK095963	-31800	+	TSC_hg19_v1_chr12_-_51717901 CU690454 AF146531	53433	-	TSC_hg19_v1_chr12_-_51717911 AK093638 AB032698 AK000783 AK225911 NM_016293	53486	-	TSC_hg19_v1_chr12_-_51717961 BC047686 AK314304	53545	-	BC120965|SMAGP|57228|small cell adhesion glycoprotein##BC120966|SMAGP|57228|small cell adhesion glycoprotein##BC008712|SMAGP|57228|small cell adhesion glycoprotein##NM_001033873|SMAGP|57228|small cell adhesion glycoprotein##BC001400|SMAGP|57228|small cell adhesion glycoprotein##AK001839|SMAGP|57228|small cell adhesion glycoprotein##NM_001031628|SMAGP|57228|small cell adhesion glycoprotein##AK125855|DAZAP2|9802|DAZ associated protein 2##D31767|DAZAP2|9802|DAZ associated protein 2##BC002334|DAZAP2|9802|DAZ associated protein 2##BC007900|DAZAP2|9802|DAZ associated protein 2##AK095963|DAZAP2|9802|DAZ associated protein 2##AF146531|BIN2|51411|bridging integrator 2##AK093638|BIN2|51411|bridging integrator 2##AB032698|BIN2|51411|bridging integrator 2##AK000783|BIN2|51411|bridging integrator 2##AK225911|BIN2|51411|bridging integrator 2##NM_016293|BIN2|51411|bridging integrator 2##BC047686|BIN2|51411|bridging integrator 2##AK314304|BIN2|51411|bridging integrator 2	0.0	
chr13	93886519	93886650	reg1040722.p1	3.850	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	-7157	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-1835680	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-5561715	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	1245242	-	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	1361845	-	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	1361912	-	NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase	0.982908	CTCF.p2:0:0.983
chr17	27223879	27224060	reg1032111.p1	3.850	+	TSC_hg19_v1_chr17_+_27182033 AB049388 AK023342 AY007435 BX537542 BC019094 NM_005702 CU676380 DQ892626 DQ895866 AF082657 AF082658	-41946	+	BC021228 TSC_hg19_v1_chr17_-_27169811 BX647766 AK299477 AK001562 AK057665 NM_001077498 NM_018182	-54179	-	TSC_hg19_v1_chr17_-_27139467 AK095569	-84522	-	M60922 CU678570 AB528533 BC003683 TSC_hg19_v1_chr17_-_27224641	639	-	TSC_hg19_v1_chr17_-_27224717 NM_004475	743	-	AX795344 TSC_hg19_v1_chr17_-_27229986 AX795345 AX795340 AX795338 AX795342 BC015582 AX795337 AX795341 AX795339 AX795335 AX795336 AK296017 AX795346 AX795343 AY358566 NM_144683	6036	-	AB049388|ERAL1|26284|Era G-protein-like 1 (E. coli)##AK023342|ERAL1|26284|Era G-protein-like 1 (E. coli)##AY007435|ERAL1|26284|Era G-protein-like 1 (E. coli)##BX537542|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC019094|ERAL1|26284|Era G-protein-like 1 (E. coli)##NM_005702|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ892626|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ895866|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082657|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082658|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC021228|C17orf63|55731|chromosome 17 open reading frame 63##BX647766|C17orf63|55731|chromosome 17 open reading frame 63##AK299477|C17orf63|55731|chromosome 17 open reading frame 63##AK001562|C17orf63|55731|chromosome 17 open reading frame 63##AK057665|C17orf63|55731|chromosome 17 open reading frame 63##NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63##NM_018182|C17orf63|55731|chromosome 17 open reading frame 63##AK095569|C17orf63|55731|chromosome 17 open reading frame 63##M60922|FLOT2|2319|flotillin 2##BC003683|FLOT2|2319|flotillin 2##NM_004475|FLOT2|2319|flotillin 2##BC015582|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AK296017|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AY358566|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##NM_144683|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13	0.0	
chr17	76134143	76134216	reg1038639.p2	3.850	+	BC023597 NM_007267 TSC_hg19_v1_chr17_-_76128499	-5679	-	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	-7313	+	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	-9341	-	AY358510 NM_001163075	8254	+	TSC_hg19_v1_chr17_+_76164661 AJ002308 AY358916 NM_004710 BC000407 BC105992 BC029755 DQ891832 DQ895019	30481	+	AB451268 AB451395 BT006941 AB591021 BC007872 BC007986 BC006484 AK314950 K02581 TSC_hg19_v1_chr17_-_76183133 NM_003258	49000	-	BC023597|TMC6|11322|transmembrane channel-like 6##NM_007267|TMC6|11322|transmembrane channel-like 6##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8##AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6##AY358510|C17orf99|100141515|chromosome 17 open reading frame 99##NM_001163075|C17orf99|100141515|chromosome 17 open reading frame 99##AJ002308|SYNGR2|9144|synaptogyrin 2##AY358916|SYNGR2|9144|synaptogyrin 2##NM_004710|SYNGR2|9144|synaptogyrin 2##BC000407|SYNGR2|9144|synaptogyrin 2##BC105992|SYNGR2|9144|synaptogyrin 2##BC029755|SYNGR2|9144|synaptogyrin 2##DQ891832|SYNGR2|9144|synaptogyrin 2##DQ895019|SYNGR2|9144|synaptogyrin 2##AB451268|TK1|7083|thymidine kinase 1, soluble##AB451395|TK1|7083|thymidine kinase 1, soluble##BT006941|TK1|7083|thymidine kinase 1, soluble##BC007872|TK1|7083|thymidine kinase 1, soluble##BC007986|TK1|7083|thymidine kinase 1, soluble##BC006484|TK1|7083|thymidine kinase 1, soluble##AK314950|TK1|7083|thymidine kinase 1, soluble##K02581|TK1|7083|thymidine kinase 1, soluble##NM_003258|TK1|7083|thymidine kinase 1, soluble	0.950664	CTCF.p2:37:0.951
chr2	173458574	173458657	reg1036204.p2	3.850	+	AB528474 CU691664 TSC_hg19_v1_chr2_+_173420875 DQ891300 DQ893348 DQ894484 DQ896668 DQ234350	-37740	+	TSC_hg19_v1_chr2_+_173420856 AK312700 AK304388 BC039158	-37790	+	TSC_hg19_v1_chr2_+_173420776 NM_002610	-37834	+	TSC_hg19_v1_chr2_+_173600519 NM_007023	141906	+	AB209681 TSC_hg19_v1_chr2_+_173600599 U78516	141985	+	TSC_hg19_v1_chr2_+_173600637 AB027471 AK313084 BC024004 AB590290 DQ890549 DQ894011	142057	+	DQ891300|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ893348|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ894484|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ896668|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##DQ234350|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##AK312700|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##AK304388|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##BC039158|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##NM_002610|PDK1|5163|pyruvate dehydrogenase kinase, isozyme 1##NM_007023|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB209681|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##U78516|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB027471|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK313084|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##BC024004|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ890549|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ894011|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4	0.95588	CTCF.p2:5:0.956
chr2	47540943	47541073	reg1021165.p2	3.850	+	TSC_hg19_v1_chr2_-_47403685 NM_001743	-137299	-	TSC_hg19_v1_chr2_-_47403656 BC008437	-137354	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	-137358	-	NM_002354 TSC_hg19_v1_chr2_+_47596376	55334	+	TSC_hg19_v1_chr2_+_47596449 AK026585 BC014785 M26481 M32325 X14758 M33011 M32306 DQ891338 DQ894520 CR542259 CR542283	55537	+	TSC_hg19_v1_chr2_+_47630218 AK304496	89196	+	NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC008437|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##NM_002354|EPCAM|4072|epithelial cell adhesion molecule##AK026585|EPCAM|4072|epithelial cell adhesion molecule##BC014785|EPCAM|4072|epithelial cell adhesion molecule##M26481|EPCAM|4072|epithelial cell adhesion molecule##M32325|EPCAM|4072|epithelial cell adhesion molecule##X14758|EPCAM|4072|epithelial cell adhesion molecule##M33011|EPCAM|4072|epithelial cell adhesion molecule##M32306|EPCAM|4072|epithelial cell adhesion molecule##DQ891338|EPCAM|4072|epithelial cell adhesion molecule##DQ894520|EPCAM|4072|epithelial cell adhesion molecule##CR542259|EPCAM|4072|epithelial cell adhesion molecule##CR542283|EPCAM|4072|epithelial cell adhesion molecule##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.678996	CTCF.p2:67:0.679
chr3	31463274	31463454	reg1032697.p2	3.850	+	AL832766 NM_207359	-527212	-	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-814961	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-815342	+	TSC_hg19_v1_chr3_+_31574119 AK311488	110766	+	TSC_hg19_v1_chr3_+_31574468 AK074587	111085	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	111118	+	AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.0	
chr3	65422429	65422521	reg1034062.p2	3.850	+	TSC_hg19_v1_chr3_-_64673677 BC036770 AK310571	-748789	-	TSC_hg19_v1_chr3_-_64673334 AF261918 BC130578 BC171764 AF488803 NM_182920	-749128	-	AB037733 TSC_hg19_v1_chr3_-_64672299	-750180	-	BC062367 NM_001033057 NM_004742 NM_015520 TSC_hg19_v1_chr3_-_66024518	602038	-	AK092495 AX747571 NM_173471	696809	+	NM_001164796	848692	+	BC036770|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AK310571|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF261918|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC130578|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC171764|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AF488803|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##NM_182920|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##AB037733|ADAMTS9|56999|ADAM metallopeptidase with thrombospondin type 1 motif, 9##BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##NM_001164796|SLC25A26|115286|solute carrier family 25, member 26	0.981644	CTCF.p2:5:0.982
chr3	99763321	99763485	reg1032139.p2	3.850	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	-168412	-	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	-226658	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	-405953	+	BC017987 NM_001042459 NM_182909 AF329092 AX776292	69949	-	AK300704 NM_001167924	70370	+	TSC_hg19_v1_chr3_+_99898312 AK055026	134958	+	EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like##AK300704|C3orf26|84319|chromosome 3 open reading frame 26##NM_001167924|C3orf26|84319|chromosome 3 open reading frame 26	0.0	
chr4	46273283	46273463	reg1006482.p2	3.850	+	CU689108 DQ890976 DQ894150 CR933628 BC031087 AK289806 AK299884 BX648937 NM_173536 AK122845	-147360	-	TSC_hg19_v1_chr4_-_44728574 AK296051 AB209904 AK055639 AY173948 AK129655 AK308920 AF247786 NM_138335	-1544809	-	TSC_hg19_v1_chr4_+_44680469 NM_021927 BX647242 BC036768 BC012338 AK225314 AK023282 AK308667	-1592913	+	TSC_hg19_v1_chr4_-_46391400 AK125179 NM_001114175	118026	-	TSC_hg19_v1_chr4_-_46391484 AK307128	118140	-	AB209295 AK293466 S62907 TSC_hg19_v1_chr4_-_46391998 NM_000807	118540	-	DQ890976|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##DQ894150|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##CR933628|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BC031087|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK289806|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK299884|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BX648937|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##NM_173536|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK122845|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_021927|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BX647242|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC036768|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC012338|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK225314|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK023282|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK308667|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK125179|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_001114175|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK307128|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AB209295|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK293466|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##S62907|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_000807|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2	0.0	
chr5	10453118	10453299	reg1000663.p2	3.850	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-11056	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-11205	+	TSC_hg19_v1_chr5_+_10354003 AB385356	-99200	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	111234	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	308051	-	TSC_hg19_v1_chr5_-_10761341 BC002726	308134	-	AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein	0.0	
chr5	56573060	56573169	reg1035743.p2	3.850	+	NM_001127236 AL136844 AB463051 AM392551 AM393442	-63186	+	BC113004 NM_001127235	-101841	+	TSC_hg19_v1_chr5_+_56469911 AL161991 AY226828	-103217	+	BC137470 BC137473 BX648504 NM_001017992	205480	-	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	1182822	-	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	1214180	+	NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1##AL161991|GPBP1|65056|GC-rich promoter binding protein 1##AY226828|GPBP1|65056|GC-rich promoter binding protein 1##BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane	0.984055	CTCF.p2:6:0.984
chr8	102179434	102179517	reg1037863.p2	3.850	+	TSC_hg19_v1_chr8_-_101965608 NM_003406	-213852	-	TSC_hg19_v1_chr8_-_101965595 M86400	-213899	-	TSC_hg19_v1_chr8_-_101965198 NM_001135699	-214249	-	BC035233 TSC_hg19_v1_chr8_-_102217845 BC015925 AF125099 AF275802 AF275809 AK290477 BC068524	38218	-	TSC_hg19_v1_chr8_-_102217877 NM_001042511	38401	-	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	38479	-	NM_003406|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##M86400|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135699|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##BC035233|ZNF706|51123|zinc finger protein 706##BC015925|ZNF706|51123|zinc finger protein 706##AF125099|ZNF706|51123|zinc finger protein 706##AF275802|ZNF706|51123|zinc finger protein 706##AF275809|ZNF706|51123|zinc finger protein 706##AK290477|ZNF706|51123|zinc finger protein 706##BC068524|ZNF706|51123|zinc finger protein 706##NM_001042511|ZNF706|51123|zinc finger protein 706##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706	0.0	
chr8	28347690	28347871	reg1015950.p1	3.850	+	BC074986 AF453435 TSC_hg19_v1_chr8_-_28347805 BC102026 BC102027 BC102028 AK098243 NM_172366	-1	-	AK002050 AK023418 NM_018660 AB057659 AB073627	-103819	-	BC001237 TSC_hg19_v1_chr8_-_28243694	-104138	-	TSC_hg19_v1_chr8_+_28351764 NM_017412 NM_145866 AK291480 AB039723	3985	+	TSC_hg19_v1_chr8_+_28559032 AB011091	211295	+	TSC_hg19_v1_chr8_+_28559149 AF001690 AB007042 AF083551 NM_001440	211370	+	BC074986|FBXO16|157574|F-box protein 16##AF453435|FBXO16|157574|F-box protein 16##BC102026|FBXO16|157574|F-box protein 16##BC102027|FBXO16|157574|F-box protein 16##BC102028|FBXO16|157574|F-box protein 16##AK098243|ZNF395|55893|zinc finger protein 395##NM_172366|FBXO16|157574|F-box protein 16##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395##BC001237|ZNF395|55893|zinc finger protein 395##NM_017412|FZD3|7976|frizzled family receptor 3##NM_145866|FZD3|7976|frizzled family receptor 3##AK291480|FZD3|7976|frizzled family receptor 3##AB039723|FZD3|7976|frizzled family receptor 3##AB011091|EXTL3|2137|exostoses (multiple)-like 3##AF001690|EXTL3|2137|exostoses (multiple)-like 3##AB007042|EXTL3|2137|exostoses (multiple)-like 3##AF083551|EXTL3|2137|exostoses (multiple)-like 3##NM_001440|EXTL3|2137|exostoses (multiple)-like 3	0.0	
chr8	7378993	7379102	reg1034886.p1	3.850	+	DQ119826 NM_001037668 NM_001040705 BC137510 BC137513 AF540979 AY122467	-25630	+	BC140937 AB089180 AF540977 BC128437 BC128438 NM_001040703 NM_152250	-33831	+	AB089181 AF529417 AF540978 BC100844 BC100845 BC100846 BC100847 BC110062 BC111688 NM_001040704 NM_152251	-35142	-	NM_001136572	38186	-	NM_001136572	61127	-	NM_001164452 NM_001164456	193917	+	DQ119826|DEFB107A|245910|defensin, beta 107A##NM_001037668|DEFB107A|245910|defensin, beta 107A##NM_001040705|DEFB107B|503614|defensin, beta 107B##BC137510|DEFB107A|245910|defensin, beta 107A##BC137513|DEFB107A|245910|defensin, beta 107A##AF540979|DEFB107A|245910|defensin, beta 107A##AY122467|DEFB107A|245910|defensin, beta 107A##BC140937|DEFB105A|245908|defensin, beta 105A##AB089180|DEFB105A|245908|defensin, beta 105A##AF540977|DEFB105A|245908|defensin, beta 105A##BC128437|DEFB105A|245908|defensin, beta 105A##BC128438|DEFB105A|245908|defensin, beta 105A##NM_001040703|DEFB105B|504180|defensin, beta 105B##NM_152250|DEFB105A|245908|defensin, beta 105A##AB089181|DEFB106A|245909|defensin, beta 106A##AF529417|DEFB106A|245909|defensin, beta 106A##AF540978|DEFB106A|245909|defensin, beta 106A##BC100844|DEFB106A|245909|defensin, beta 106A##BC100845|DEFB106A|245909|defensin, beta 106A##BC100846|DEFB106A|245909|defensin, beta 106A##BC100847|DEFB106A|245909|defensin, beta 106A##BC110062|DEFB106A|245909|defensin, beta 106A##BC111688|DEFB106A|245909|defensin, beta 106A##NM_001040704|DEFB106B|503841|defensin, beta 106B##NM_152251|DEFB106A|245909|defensin, beta 106A##NM_001136572|FAM90A7|441317|family with sequence similarity 90, member A7##NM_001136572|FAM90A7|441317|family with sequence similarity 90, member A7##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13	0.936421	CTCF.p2:29:0.936
chrX	1653256	1653426	reg1029628.p1	3.850	+	AK301844 NM_001173473	-80690	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-81540	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-142372	-	BC043610 GQ280263 NM_178129 AK126147	2697	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	57188	+	NM_004043 U11090	61006	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr10	125967963	125968071	reg1030651.p1	3.849	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	-114864	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-116118	-	BC137492 BC146862 AY358565 NM_198148	-316521	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	139456	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	139501	-	NM_001146340 TSC_hg19_v1_chr10_-_126138606	170560	-	BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##NM_001146340|NKX1-2|390010|NK1 homeobox 2	0.0	
chr11	102431551	102431645	reg1036160.p1	3.849	+	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	-30139	-	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-107985	-	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-213570	+	AB527354 NM_004771 Y12779	64457	-	AB527320 AF195192 AY358752 NM_022122	144857	-	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	164055	-	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	0.0	
chr1	154832927	154833107	reg1032359.p2	3.849	+	CU692066 HQ448417 AF438203 BC042147 NM_170782	-755	-	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-232552	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-232603	-	BX649146 TSC_hg19_v1_chr1_-_154840541	7484	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	9729	-	BT019976 CR541998 TSC_hg19_v1_chr1_-_154909187 L77213	76157	-	HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BT019976|PMVK|10654|phosphomevalonate kinase##CR541998|PMVK|10654|phosphomevalonate kinase##L77213|PMVK|10654|phosphomevalonate kinase	0.041267	
chr13	47213601	47213669	reg1032683.p1	3.849	+	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-86128	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-86215	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	-86312	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	157680	-	AK314132 BX647777 AK302787 NM_000621 NM_001165947	257432	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1361816	-	HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.0	
chr1	35014965	35015050	reg1036034.p1	3.849	+	NM_001134734	-372455	+	AK123355 NM_032884 BC007637	-382408	+	AY210418 NM_052896	-383565	-	AK129509 BC004379 NM_005268	205676	+	AK057628 NM_153212	210334	+	AK026139 NM_024009 TSC_hg19_v1_chr1_+_35246807	231799	+	NM_001134734|C1orf94|84970|chromosome 1 open reading frame 94##AK123355|C1orf94|84970|chromosome 1 open reading frame 94##NM_032884|C1orf94|84970|chromosome 1 open reading frame 94##BC007637|C1orf94|84970|chromosome 1 open reading frame 94##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2##AK129509|GJB5|2709|gap junction protein, beta 5, 31.1kDa##BC004379|GJB5|2709|gap junction protein, beta 5, 31.1kDa##NM_005268|GJB5|2709|gap junction protein, beta 5, 31.1kDa##AK057628|GJB4|127534|gap junction protein, beta 4, 30.3kDa##NM_153212|GJB4|127534|gap junction protein, beta 4, 30.3kDa##AK026139|GJB3|2707|gap junction protein, beta 3, 31kDa##NM_024009|GJB3|2707|gap junction protein, beta 3, 31kDa	0.678787	CTCF.p2:2:0.679
chr15	34880587	34880687	reg1000434.p2	3.849	+	BX647673 TSC_hg19_v1_chr15_-_34875067	-5568	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_001023567	-52471	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_181077	-198692	-	BC069131 BC069339 NM_020660 BC112110 BC112114 BC143788	166097	-	AK129892 AK056592 AK129902 AK290616 TSC_hg19_v1_chr15_-_35087751 BC009978 NM_005159	207200	-	AB384497 AK291615 BC127111 BC127112 TSC_hg19_v1_chr15_-_35261899 AB011132 AK315815 BX647820 EF553519 NM_014691	381290	-	BX647673|GOLGA8B|440270|golgin A8 family, member B##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_001023567|GOLGA8B|440270|golgin A8 family, member B##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_181077|GOLGA8A|23015|golgin A8 family, member A##BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa##BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa##NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa##BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa##AK129892|ACTC1|70|actin, alpha, cardiac muscle 1##AK056592|ACTC1|70|actin, alpha, cardiac muscle 1##AK129902|ACTC1|70|actin, alpha, cardiac muscle 1##AK290616|ACTC1|70|actin, alpha, cardiac muscle 1##BC009978|ACTC1|70|actin, alpha, cardiac muscle 1##NM_005159|ACTC1|70|actin, alpha, cardiac muscle 1##AK291615|AQR|9716|aquarius homolog (mouse)##BC127111|AQR|9716|aquarius homolog (mouse)##BC127112|AQR|9716|aquarius homolog (mouse)##AB011132|AQR|9716|aquarius homolog (mouse)##AK315815|AQR|9716|aquarius homolog (mouse)##BX647820|AQR|9716|aquarius homolog (mouse)##EF553519|AQR|9716|aquarius homolog (mouse)##NM_014691|AQR|9716|aquarius homolog (mouse)	0.0	
chr15	75992782	75992849	reg1034013.p1	3.849	+	BC018775 NM_153271 AL833039 EF219141 DQ891695 DQ895211 EU831407 EU831499	-51421	+	AB463774 AM393583 CU675427 CU680036 TSC_hg19_v1_chr15_-_75932566 BC020557 BC011745 AY050497 AL136913 BC006487 AK001830 AK223121 NM_018285	-60229	-	NM_001042588	-74097	-	AB462981 AY359468 X96753 TSC_hg19_v1_chr15_-_76005157	12313	-	TSC_hg19_v1_chr15_-_76005190 NM_001897	12380	-	TSC_hg19_v1_chr15_+_76016306 BC039862 NM_175881	23499	+	BC018775|SNX33|257364|sorting nexin 33##NM_153271|SNX33|257364|sorting nexin 33##AL833039|SNX33|257364|sorting nexin 33##EF219141|SNX33|257364|sorting nexin 33##DQ891695|SNX33|257364|sorting nexin 33##DQ895211|SNX33|257364|sorting nexin 33##EU831407|SNX33|257364|sorting nexin 33##EU831499|SNX33|257364|sorting nexin 33##AM393583|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC020557|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC011745|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AY050497|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AL136913|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC006487|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK001830|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK223121|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_018285|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_001042588|SNUPN|10073|snurportin 1##AY359468|CSPG4|1464|chondroitin sulfate proteoglycan 4##X96753|CSPG4|1464|chondroitin sulfate proteoglycan 4##NM_001897|CSPG4|1464|chondroitin sulfate proteoglycan 4##BC039862|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_175881|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1	0.01042	
chr3	116172928	116173037	reg1039916.p1	3.849	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-8609	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-8651	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-830563	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	2580551	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	2580701	-	AK097667 NM_152538 AK292387	2691915	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.940813	CTCF.p2:14:0.941
chr7	69272512	69272693	reg1029526.p1	3.849	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-208014	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-208273	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-208766	+	TSC_hg19_v1_chr7_+_70231164 AK296981	958603	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1325186	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2529176	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.0	
chr9	139981969	139982061	reg1036794.p2	3.849	+	TSC_hg19_v1_chr9_+_139981532 AK299043 AK298480 AK309808 CR749534	-486	+	AK315797 BC006079 TSC_hg19_v1_chr9_+_139981436 BC002953 CU675227 DQ891861 DQ895050 AF145732	-567	+	TSC_hg19_v1_chr9_+_139981431 AY358465	-587	+	AK298288 TSC_hg19_v1_chr9_-_140008972	26970	-	TSC_hg19_v1_chr9_-_140009160 AB209787	27144	-	TSC_hg19_v1_chr9_-_140009166 AF154502	27149	-	AK299043|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AK298480|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AK309808|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##CR749534|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AK315797|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##BC006079|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##BC002953|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##DQ891861|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##DQ895050|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AF145732|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AY358465|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AK298288|DPP7|29952|dipeptidyl-peptidase 7##AB209787|DPP7|29952|dipeptidyl-peptidase 7##AF154502|DPP7|29952|dipeptidyl-peptidase 7	0.0	
chr1	110691828	110691950	reg1036730.p1	3.848	+	AK098556 NM_203412 BC058929	-36814	+	AF008203 BC112007 BC113428 NM_006492	-78612	-	AK291059 TSC_hg19_v1_chr1_+_110577249 AL834196 AB051548 AB463038	-114636	+	NM_001010898 AK289982 TSC_hg19_v1_chr1_+_110693135	1245	+	TSC_hg19_v1_chr1_+_110753347 NM_001039574 NM_004978	61455	+	AK310193 M64676 TSC_hg19_v1_chr1_+_110754079 BC101769	62108	+	AK098556|UBL4B|164153|ubiquitin-like 4B##NM_203412|UBL4B|164153|ubiquitin-like 4B##BC058929|UBL4B|164153|ubiquitin-like 4B##AF008203|ALX3|257|ALX homeobox 3##BC112007|ALX3|257|ALX homeobox 3##BC113428|ALX3|257|ALX homeobox 3##NM_006492|ALX3|257|ALX homeobox 3##AK291059|FAM40A|85369|family with sequence similarity 40, member A##AL834196|FAM40A|85369|family with sequence similarity 40, member A##AB051548|FAM40A|85369|family with sequence similarity 40, member A##NM_001010898|SLC6A17|388662|solute carrier family 6, member 17##AK289982|SLC6A17|388662|solute carrier family 6, member 17##NM_001039574|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_004978|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##AK310193|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##M64676|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##BC101769|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4	0.839349	CTCF.p2:-107:0.839
chr12	122075477	122075602	reg1032567.p1	3.848	+	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	-10896	+	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	-56625	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	-57280	-	BC057760 NM_173855	32020	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	75205	+	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	156035	-	BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B##AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)	0.0	
chr14	24564911	24565051	reg1035342.p2	3.848	+	TSC_hg19_v1_chr14_+_24563519 NM_001018073 NM_004563 AK311710 AK316206 AK129934 AK307913 X92720 BC001454 BX248272 CU674712 CR456913	-1490	+	M95925 M81840 NM_006177 BC012395 AB593104 AB593106 AB593102	-11151	-	AK314182 BC018046 AB009288 NM_006032 TSC_hg19_v1_chr14_+_24540770 AK294460 AK222675 AL137688	-24212	+	NM_001163484 TSC_hg19_v1_chr14_+_24583976	18960	+	TSC_hg19_v1_chr14_+_24583985 NM_025230 AB209073	19011	+	TSC_hg19_v1_chr14_+_24584020 AK074296 AK307849 BC067132	19046	+	NM_001018073|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##NM_004563|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK311710|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK316206|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK129934|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK307913|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##X92720|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##BC001454|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##BX248272|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##CR456913|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##M95925|NRL|4901|neural retina leucine zipper##M81840|NRL|4901|neural retina leucine zipper##NM_006177|NRL|4901|neural retina leucine zipper##BC012395|NRL|4901|neural retina leucine zipper##AB593104|NRL|4901|neural retina leucine zipper##AB593106|NRL|4901|neural retina leucine zipper##AB593102|NRL|4901|neural retina leucine zipper##AK314182|CPNE6|9362|copine VI (neuronal)##BC018046|CPNE6|9362|copine VI (neuronal)##AB009288|CPNE6|9362|copine VI (neuronal)##NM_006032|CPNE6|9362|copine VI (neuronal)##AK294460|CPNE6|9362|copine VI (neuronal)##AK222675|CPNE6|9362|copine VI (neuronal)##AL137688|CPNE6|9362|copine VI (neuronal)##NM_001163484|DCAF11|80344|DDB1 and CUL4 associated factor 11##NM_025230|DCAF11|80344|DDB1 and CUL4 associated factor 11##AB209073|DCAF11|80344|DDB1 and CUL4 associated factor 11##AK074296|DCAF11|80344|DDB1 and CUL4 associated factor 11##AK307849|DCAF11|80344|DDB1 and CUL4 associated factor 11##BC067132|DCAF11|80344|DDB1 and CUL4 associated factor 11	0.013308	
chr17	49034650	49034756	reg1002126.p2	3.848	+	AK313904 NM_001243877	-89365	-	TSC_hg19_v1_chr17_-_48943716 BC070493 BC098415 NM_001243885 NM_005749	-91007	-	NM_175575	-122099	+	TSC_hg19_v1_chr17_-_49124138 BC007524 BC059946 AK299553 AK307793 AK295098 AK309214 AK024068 NM_001251971	89525	-	TSC_hg19_v1_chr17_-_49198227 AF327452 BC106048 AK302789 AY850123 AB011088 BC146755 BC153878 AK091921 AX747254 NM_001130527 NM_001130528 NM_003971	163452	-	NM_001018136 TSC_hg19_v1_chr17_+_49230927 AK291105 NM_000269 NM_198175	196208	+	AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1##BC070493|TOB1|10140|transducer of ERBB2, 1##BC098415|TOB1|10140|transducer of ERBB2, 1##NM_001243885|TOB1|10140|transducer of ERBB2, 1##NM_005749|TOB1|10140|transducer of ERBB2, 1##NM_175575|WFIKKN2|124857|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2##BC007524|SPAG9|9043|sperm associated antigen 9##BC059946|SPAG9|9043|sperm associated antigen 9##AK299553|SPAG9|9043|sperm associated antigen 9##AK307793|SPAG9|9043|sperm associated antigen 9##AK295098|SPAG9|9043|sperm associated antigen 9##AK309214|SPAG9|9043|sperm associated antigen 9##AK024068|SPAG9|9043|sperm associated antigen 9##NM_001251971|SPAG9|9043|sperm associated antigen 9##AF327452|SPAG9|9043|sperm associated antigen 9##AK302789|SPAG9|9043|sperm associated antigen 9##AY850123|SPAG9|9043|sperm associated antigen 9##AB011088|SPAG9|9043|sperm associated antigen 9##BC146755|SPAG9|9043|sperm associated antigen 9##BC153878|SPAG9|9043|sperm associated antigen 9##AK091921|SPAG9|9043|sperm associated antigen 9##NM_001130527|SPAG9|9043|sperm associated antigen 9##NM_001130528|SPAG9|9043|sperm associated antigen 9##NM_003971|SPAG9|9043|sperm associated antigen 9##NM_001018136|NME1-NME2|654364|NME1-NME2 readthrough##AK291105|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_000269|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_198175|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in	0.0	
chr19	1248108	1248268	reg1021381.p1	3.848	+	TSC_hg19_v1_chr19_+_1241811 BC050458 BC018079 CR542218	-6355	+	TSC_hg19_v1_chr19_+_1241769 BC058927	-6420	+	AK094357 S87916 S87918 X63422 X63423 TSC_hg19_v1_chr19_+_1241766	-6422	+	TSC_hg19_v1_chr19_+_1248581 NM_177401	386	+	TSC_hg19_v1_chr19_+_1249886 BC060848 BC094778	1696	+	TSC_hg19_v1_chr19_+_1269330 NM_001280 AK095781 AK304185 AK304470 AK311601 AK128423 AF021336 AK094781 D78134 BC000901 BC000403	21117	+	BC050458|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC018079|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##CR542218|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC058927|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##AK094357|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87916|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##S87918|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63422|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##X63423|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_177401|MIDN|90007|midnolin##BC060848|MIDN|90007|midnolin##BC094778|MIDN|90007|midnolin##NM_001280|CIRBP|1153|cold inducible RNA binding protein##AK095781|CIRBP|1153|cold inducible RNA binding protein##AK304185|CIRBP|1153|cold inducible RNA binding protein##AK304470|CIRBP|1153|cold inducible RNA binding protein##AK311601|CIRBP|1153|cold inducible RNA binding protein##AK128423|CIRBP|1153|cold inducible RNA binding protein##AF021336|CIRBP|1153|cold inducible RNA binding protein##AK094781|CIRBP|1153|cold inducible RNA binding protein##D78134|CIRBP|1153|cold inducible RNA binding protein##BC000901|CIRBP|1153|cold inducible RNA binding protein##BC000403|CIRBP|1153|cold inducible RNA binding protein	0.627688	CTCF.p2:49:0.628
chr2	97524565	97524659	reg1001186.p3	3.848	+	TSC_hg19_v1_chr2_-_97523744 AB528054 CU689148 AF151034 BC031303 AB209367 AK312193 NM_016466	-870	-	AF492401 AY196212 BC107056 AK057011 AK092564 AX747600 NM_144994	-14867	-	TSC_hg19_v1_chr2_+_97482006 BC037272 AK126847 NM_017623 NM_199078 BC007199 AF216965 AK000025 CU675553	-42130	+	TSC_hg19_v1_chr2_-_97535634 BC109104 BC109103	11019	-	TSC_hg19_v1_chr2_-_97535818 AY358842 NM_017789	11149	-	AF151068 NM_001172667	36264	-	AF151034|ANKRD39|51239|ankyrin repeat domain 39##BC031303|ANKRD39|51239|ankyrin repeat domain 39##AK312193|ANKRD39|51239|ankyrin repeat domain 39##NM_016466|ANKRD39|51239|ankyrin repeat domain 39##AF492401|ANKRD23|200539|ankyrin repeat domain 23##AY196212|ANKRD23|200539|ankyrin repeat domain 23##BC107056|ANKRD23|200539|ankyrin repeat domain 23##AK057011|ANKRD23|200539|ankyrin repeat domain 23##AK092564|ANKRD23|200539|ankyrin repeat domain 23##NM_144994|ANKRD23|200539|ankyrin repeat domain 23##BC037272|CNNM3|26505|cyclin M3##AK126847|CNNM3|26505|cyclin M3##NM_017623|CNNM3|26505|cyclin M3##NM_199078|CNNM3|26505|cyclin M3##BC007199|CNNM3|26505|cyclin M3##AF216965|CNNM3|26505|cyclin M3##AK000025|CNNM3|26505|cyclin M3##BC109104|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##BC109103|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##AY358842|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##NM_017789|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##AF151068|FAM178B|51252|family with sequence similarity 178, member B##NM_001172667|FAM178B|51252|family with sequence similarity 178, member B	0.010642	
chr8	101505655	101505835	reg1024242.p4	3.848	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-183460	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-183564	-	AB271913 AB271914 AB029316 NM_015435	-190274	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	66195	-	AK093906 AX748361 NM_152628	156147	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	228061	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr8	123651440	123651507	reg1007213.p2	3.848	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-997847	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1826967	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1827203	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	142438	+	BC042145 TSC_hg19_v1_chr8_+_123794000	142521	+	TSC_hg19_v1_chr8_+_123794108 AB020661	142630	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.0	
chr1	202895951	202896079	reg1033176.p1	3.847	+	AB464114 BT007133 U74324 TSC_hg19_v1_chr1_-_202858251 S78873 BC018488 BC037392 AK311900 AK223538 NM_002871	-37711	-	BC049825 TSC_hg19_v1_chr1_-_202830655 BC040684 AX721218	-65333	-	AF087481 NM_006618 TSC_hg19_v1_chr1_-_202777550	-118455	-	TSC_hg19_v1_chr1_-_202896338 AF190900 AK223072 BC003183 BC004175	318	-	AF306689 TSC_hg19_v1_chr1_-_202896398 AK027656 NM_021633	369	-	TSC_hg19_v1_chr1_-_202927406 AY424279 AF125179 AF125180 AK222503 AF151803	31323	-	BT007133|RABIF|5877|RAB interacting factor##U74324|RABIF|5877|RAB interacting factor##S78873|RABIF|5877|RAB interacting factor##BC018488|RABIF|5877|RAB interacting factor##BC037392|RABIF|5877|RAB interacting factor##AK311900|RABIF|5877|RAB interacting factor##AK223538|RABIF|5877|RAB interacting factor##NM_002871|RABIF|5877|RAB interacting factor##AF087481|KDM5B|10765|lysine (K)-specific demethylase 5B##NM_006618|KDM5B|10765|lysine (K)-specific demethylase 5B##AF190900|KLHL12|59349|kelch-like 12 (Drosophila)##AK223072|KLHL12|59349|kelch-like 12 (Drosophila)##BC003183|KLHL12|59349|kelch-like 12 (Drosophila)##BC004175|KLHL12|59349|kelch-like 12 (Drosophila)##AF306689|KLHL12|59349|kelch-like 12 (Drosophila)##AK027656|KLHL12|59349|kelch-like 12 (Drosophila)##NM_021633|KLHL12|59349|kelch-like 12 (Drosophila)##AY424279|ADIPOR1|51094|adiponectin receptor 1##AF125179|ADIPOR1|51094|adiponectin receptor 1##AK222503|ADIPOR1|51094|adiponectin receptor 1##AF151803|ADIPOR1|51094|adiponectin receptor 1	0.923445	CTCF.p2:-6:0.923
chr1	22366213	22366393	reg1035075.p1	3.847	+	TSC_hg19_v1_chr1_+_22352003 AF161506 BC016053	-14291	+	BC005918 BC015103 D00306 NM_005747 BC007028 AK225620 AK308514 BC008383 CU675183 CU678941 DQ893182 DQ896490	-38146	+	NM_007352 AK092382 AK308518 AX747509 BC005216 M18692 AK315798 AK308510 M16630	-62824	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	12867	+	TSC_hg19_v1_chr1_+_22379812 AL121737	13502	+	AY009398 BT020125 AB590593 AB061675 AY358947 AF316543 NM_030761 BC057781	103208	-	AF161506|LINC00339|29092|long intergenic non-protein coding RNA 339##BC016053|LINC00339|29092|long intergenic non-protein coding RNA 339##BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A##D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B##M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A##M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B##NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AY009398|WNT4|54361|wingless-type MMTV integration site family, member 4##BT020125|WNT4|54361|wingless-type MMTV integration site family, member 4##AB061675|WNT4|54361|wingless-type MMTV integration site family, member 4##AY358947|WNT4|54361|wingless-type MMTV integration site family, member 4##AF316543|WNT4|54361|wingless-type MMTV integration site family, member 4##NM_030761|WNT4|54361|wingless-type MMTV integration site family, member 4##BC057781|WNT4|54361|wingless-type MMTV integration site family, member 4	0.0	
chr1	27960761	27960884	reg1035987.p2	3.847	+	M27454 AK301078 BC002836 AK304846 NM_001042729	-7747	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	-8152	-	BC064935 TSC_hg19_v1_chr1_-_27930394	-30445	-	TSC_hg19_v1_chr1_-_27961656 BC064382 AK130188 NM_005248	864	-	TSC_hg19_v1_chr1_-_27998690 X02492 BC011601 BC015603	37855	-	TSC_hg19_v1_chr1_-_27998704 AK024814 AK314488	37887	-	M27454|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK301078|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042729|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##BC064935|AHDC1|27245|AT hook, DNA binding motif, containing 1##BC064382|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK130188|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_005248|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##X02492|IFI6|2537|interferon, alpha-inducible protein 6##BC011601|IFI6|2537|interferon, alpha-inducible protein 6##BC015603|IFI6|2537|interferon, alpha-inducible protein 6##AK024814|IFI6|2537|interferon, alpha-inducible protein 6##AK314488|IFI6|2537|interferon, alpha-inducible protein 6	0.0	
chr14	75651270	75651353	reg1034777.p2	3.847	+	TSC_hg19_v1_chr14_-_75643341 NM_006827	-7959	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	-7978	-	TSC_hg19_v1_chr14_-_75643322 AK296800 AK312384	-7991	-	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	94271	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	243330	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	243702	+	NM_006827|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK296800|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK312384|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2	0.0	
chr15	54777975	54778075	reg1030588.p1	3.847	+	NM_001080534	-472925	+	AK096055 BX537884 NM_182758	-726178	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-1695831	-	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	711067	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	711154	-	AF125393 NM_183234 U57094 U38654 NM_004580	784512	-	NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family	0.772375	CTCF.p2:14:0.772
chr16	11318931	11319112	reg1027303.p1	3.847	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-280578	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-282786	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-282855	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	31029	-	X63758 BC096135 BC096136 BC096137 NM_005425	44117	-	NM_021247	48430	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr16	31519950	31520087	reg1032048.p2	3.847	+	TSC_hg19_v1_chr16_-_31519698 BC054514 BC009308 AK222913 AK296166 AK296491 AK304608 AK023930 NM_022744	-351	-	BC000822 TSC_hg19_v1_chr16_-_31505257	-14766	-	BC131542 M95549 NM_003041	-25580	+	NM_016633 AF147435 AF208865 AF364517 BC035842	19198	+	TSC_hg19_v1_chr16_+_31711914 AK054698	191898	+	TSC_hg19_v1_chr16_+_31711931 BC021555 BC000552	191922	+	BC009308|C16orf58|64755|chromosome 16 open reading frame 58##AK222913|C16orf58|64755|chromosome 16 open reading frame 58##AK296166|C16orf58|64755|chromosome 16 open reading frame 58##AK296491|C16orf58|64755|chromosome 16 open reading frame 58##AK304608|C16orf58|64755|chromosome 16 open reading frame 58##AK023930|C16orf58|64755|chromosome 16 open reading frame 58##NM_022744|C16orf58|64755|chromosome 16 open reading frame 58##BC000822|C16orf58|64755|chromosome 16 open reading frame 58##BC131542|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2##M95549|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2##NM_003041|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2##NM_016633|AHSP|51327|alpha hemoglobin stabilizing protein##AF147435|AHSP|51327|alpha hemoglobin stabilizing protein##AF208865|AHSP|51327|alpha hemoglobin stabilizing protein##AF364517|AHSP|51327|alpha hemoglobin stabilizing protein##BC035842|AHSP|51327|alpha hemoglobin stabilizing protein##AK054698|KIAA0664L3|100132341|KIAA0664-like 3##BC021555|KIAA0664L3|100132341|KIAA0664-like 3##BC000552|KIAA0664L3|100132341|KIAA0664-like 3	0.0	
chr18	44924228	44924315	reg1036584.p1	3.847	+	TSC_hg19_v1_chr18_-_44702736 NM_016097	-221521	-	TSC_hg19_v1_chr18_-_44702734 AK027108	-221538	-	CR533488 DQ892866 DQ896115 EU831653 EU831736 BC017391 TSC_hg19_v1_chr18_-_44702679 BC010888 AF164798 AF371963 AF125100 AL136667	-221582	-	BC014840 NM_005901	532654	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	532944	-	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	533218	-	NM_016097|IER3IP1|51124|immediate early response 3 interacting protein 1##AK027108|IER3IP1|51124|immediate early response 3 interacting protein 1##CR533488|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ892866|IER3IP1|51124|immediate early response 3 interacting protein 1##DQ896115|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831653|IER3IP1|51124|immediate early response 3 interacting protein 1##EU831736|IER3IP1|51124|immediate early response 3 interacting protein 1##BC017391|IER3IP1|51124|immediate early response 3 interacting protein 1##BC010888|IER3IP1|51124|immediate early response 3 interacting protein 1##AF164798|IER3IP1|51124|immediate early response 3 interacting protein 1##AF371963|IER3IP1|51124|immediate early response 3 interacting protein 1##AF125100|IER3IP1|51124|immediate early response 3 interacting protein 1##AL136667|IER3IP1|51124|immediate early response 3 interacting protein 1##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2	0.590466	CTCF.p2:-26:0.590
chr19	48971994	48972175	reg1039145.p1	3.847	+	BC035918 NM_170720	-7579	+	AF081466 NM_013348	-13319	+	TSC_hg19_v1_chr19_+_48949248 AF337808 BC002440 EF011614 AL713729 CU677962 DQ892630 DQ895868 AB075822 BC036281 BC047351	-22825	+	NM_004228 NM_017457 TSC_hg19_v1_chr19_+_48972572	434	+	TSC_hg19_v1_chr19_+_48972625 AB209573 BC038713 AK292405 U70728 AK299590 BC004361 AB528907 DQ892565 DQ896856 X99753	585	+	AB384647 TSC_hg19_v1_chr19_-_49014849	42756	-	BC035918|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##NM_170720|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##AF081466|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##NM_013348|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##AF337808|GRWD1|83743|glutamate-rich WD repeat containing 1##BC002440|GRWD1|83743|glutamate-rich WD repeat containing 1##EF011614|GRWD1|83743|glutamate-rich WD repeat containing 1##AL713729|GRWD1|83743|glutamate-rich WD repeat containing 1##DQ892630|GRWD1|83743|glutamate-rich WD repeat containing 1##DQ895868|GRWD1|83743|glutamate-rich WD repeat containing 1##BC036281|GRWD1|83743|glutamate-rich WD repeat containing 1##BC047351|GRWD1|83743|glutamate-rich WD repeat containing 1##NM_004228|CYTH2|9266|cytohesin 2##NM_017457|CYTH2|9266|cytohesin 2##AB209573|CYTH2|9266|cytohesin 2##BC038713|CYTH2|9266|cytohesin 2##AK292405|CYTH2|9266|cytohesin 2##U70728|CYTH2|9266|cytohesin 2##AK299590|CYTH2|9266|cytohesin 2##BC004361|CYTH2|9266|cytohesin 2##DQ892565|CYTH2|9266|cytohesin 2##DQ896856|CYTH2|9266|cytohesin 2##X99753|CYTH2|9266|cytohesin 2	0.0	
chr5	168729542	168729653	reg1011424.p1	3.847	+	AB383998 AK310549 TSC_hg19_v1_chr5_-_168728144 BC142665 BC142717 AY358884 AB017169 BC098388 AB011538 BC146759 NM_003062	-1639	-	TSC_hg19_v1_chr5_-_168271862 BC023515	-457738	-	TSC_hg19_v1_chr5_-_168006609 BC013705 NM_024594	-723082	-	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	281124	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	334647	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	334703	+	AK310549|SLIT3|6586|slit homolog 3 (Drosophila)##BC142665|SLIT3|6586|slit homolog 3 (Drosophila)##BC142717|SLIT3|6586|slit homolog 3 (Drosophila)##AY358884|SLIT3|6586|slit homolog 3 (Drosophila)##AB017169|SLIT3|6586|slit homolog 3 (Drosophila)##BC098388|SLIT3|6586|slit homolog 3 (Drosophila)##AB011538|SLIT3|6586|slit homolog 3 (Drosophila)##BC146759|SLIT3|6586|slit homolog 3 (Drosophila)##NM_003062|SLIT3|6586|slit homolog 3 (Drosophila)##BC013705|PANK3|79646|pantothenate kinase 3##NM_024594|PANK3|79646|pantothenate kinase 3##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2	0.998612	
chr5	6202896	6202980	reg1039919.p1	3.847	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	-780029	+	TSC_hg19_v1_chr5_+_5422777 AK126937	-780163	+	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	-1062427	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	175712	-	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	245915	+	TSC_hg19_v1_chr5_+_6449114 AK057805	246251	+	AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1	0.320398	CTCF.p2:7:0.320
chr6	11467834	11467908	reg1031286.p2	3.847	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-85331	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-234961	-	L43821 TSC_hg19_v1_chr6_-_11232900	-234971	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	70627	+	NM_001143948 NM_032744	311408	-	NM_002114	544852	+	BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1	0.0	
chr6	167533683	167533807	reg1034247.p1	3.847	+	NM_004367	-8451	+	TSC_hg19_v1_chr6_+_167412884 NM_007045 NM_194429 Y18046 AK294950 AK289846 BX647686 AK312791 BC011902 AB590215 CU680104 DQ893037 DQ896278 AJ420472	-120892	+	AK315467 TSC_hg19_v1_chr6_-_167370038 BC036282 NM_003730	-163688	-	NM_031409 U68031 U68030	2504	+	BC095537 NM_005299	37571	-	NM_001145121	50335	+	NM_004367|CCR6|1235|chemokine (C-C motif) receptor 6##NM_007045|FGFR1OP|11116|FGFR1 oncogene partner##NM_194429|FGFR1OP|11116|FGFR1 oncogene partner##Y18046|FGFR1OP|11116|FGFR1 oncogene partner##AK294950|FGFR1OP|11116|FGFR1 oncogene partner##AK289846|FGFR1OP|11116|FGFR1 oncogene partner##AK312791|FGFR1OP|11116|FGFR1 oncogene partner##BC011902|FGFR1OP|11116|FGFR1 oncogene partner##DQ893037|FGFR1OP|11116|FGFR1 oncogene partner##DQ896278|FGFR1OP|11116|FGFR1 oncogene partner##AJ420472|FGFR1OP|11116|FGFR1 oncogene partner##AK315467|RNASET2|8635|ribonuclease T2##BC036282|RNASET2|8635|ribonuclease T2##NM_003730|RNASET2|8635|ribonuclease T2##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31##NM_001145121|TCP10L2|401285|t-complex 10-like 2 (mouse)	0.901217	CTCF.p2:3:0.901
chr6	319645	319712	reg1035935.p2	3.847	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-27181	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-27593	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	72086	+	AF508547 BC101697 BC101699 NM_148959	337275	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	373412	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chr7	105171990	105172171	reg1029778.p1	3.847	+	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	-9419	-	TSC_hg19_v1_chr7_-_105029346 NM_182692	-142738	-	TSC_hg19_v1_chr7_-_105029265 AB489157	-142815	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	566	+	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	49855	-	AK300338 NM_138495	147528	-	BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_182692|SRPK2|6733|SRSF protein kinase 2##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1	0.0	
chr9	9353042	9353138	reg1035825.p1	3.847	+	TSC_hg19_v1_chr9_+_8858136 AK094342	-494957	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-619171	-	TSC_hg19_v1_chr9_+_8713275 AY779046	-639798	+	BC028038 NM_002839	1259632	-	NM_000550 X51420 BC052608	3340335	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	3421926	+	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##AY779046|RPL18A|6142|ribosomal protein L18a##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150	0.996115	CTCF.p2:-16:0.996
chr10	16560977	16561071	reg1036620.p1	3.846	+	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	-82039	+	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	-658533	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	-799231	-	NM_001010908	2979	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	298335	-	TSC_hg19_v1_chr10_-_16859397 AK225681 AK312520	298370	-	AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##NM_001010908|C1QL3|389941|complement component 1, q subcomponent-like 3##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1##AK225681|RSU1|6251|Ras suppressor protein 1##AK312520|RSU1|6251|Ras suppressor protein 1	0.996282	CTCF.p2:0:0.996
chr12	116997105	116997280	reg1018987.p2	3.846	+	NM_001085481	-7	+	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	-25963	+	TSC_hg19_v1_chr12_-_116715263 AY338463	-282032	-	TSC_hg19_v1_chr12_-_117175822 AK309652 BC019843 AK025068 NM_024738	178546	-	TSC_hg19_v1_chr12_-_117175868 AK222983 AK298857	178677	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	178927	+	NM_001085481|MAP1LC3B2|643246|microtubule-associated protein 1 light chain 3 beta 2##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173##AY338463|MED13L|23389|mediator complex subunit 13-like##AK309652|C12orf49|79794|chromosome 12 open reading frame 49##BC019843|C12orf49|79794|chromosome 12 open reading frame 49##AK025068|C12orf49|79794|chromosome 12 open reading frame 49##NM_024738|C12orf49|79794|chromosome 12 open reading frame 49##AK222983|C12orf49|79794|chromosome 12 open reading frame 49##AK298857|C12orf49|79794|chromosome 12 open reading frame 49##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2	0.157284	
chr15	84976703	84976807	reg1035329.p1	3.846	+	NM_001243531	-135514	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-653928	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-860527	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	167526	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	220717	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	220751	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	0.0	
chr17	10060275	10060415	reg1039559.p1	3.846	+	TSC_hg19_v1_chr17_-_9940004 AK057761 BC006454 NM_201432	-120312	-	TSC_hg19_v1_chr17_-_9939883 AK292987	-120467	-	TSC_hg19_v1_chr17_-_9929603 AB007854 AK225165 AK299574 NM_001130831	-130724	-	TSC_hg19_v1_chr17_-_10101924 AY327406 NM_201433	41561	-	AF111782 NM_003802	215976	-	AK303395 NM_002472	264921	-	AK057761|GAS7|8522|growth arrest-specific 7##BC006454|GAS7|8522|growth arrest-specific 7##NM_201432|GAS7|8522|growth arrest-specific 7##AK292987|GAS7|8522|growth arrest-specific 7##AB007854|GAS7|8522|growth arrest-specific 7##AK225165|GAS7|8522|growth arrest-specific 7##AK299574|GAS7|8522|growth arrest-specific 7##NM_001130831|GAS7|8522|growth arrest-specific 7##AY327406|GAS7|8522|growth arrest-specific 7##NM_201433|GAS7|8522|growth arrest-specific 7##AF111782|MYH13|8735|myosin, heavy chain 13, skeletal muscle##NM_003802|MYH13|8735|myosin, heavy chain 13, skeletal muscle##AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	0.0	
chr17	29835354	29835458	reg1038274.p1	3.846	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-20345	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-116542	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-116739	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	350865	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	393260	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	393325	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.0	
chr4	2934928	2935108	reg1037087.p1	3.846	+	AK025413 TSC_hg19_v1_chr4_+_2883766	-51317	+	TSC_hg19_v1_chr4_+_2845627 AH004561 S70310 BC013393 AK309186	-89352	+	TSC_hg19_v1_chr4_+_2845589 NM_001119 NM_014189 NM_014190 NM_176801	-89439	+	CU677155 EU176393 EU176739 L11669 TSC_hg19_v1_chr4_-_2935840	729	-	TSC_hg19_v1_chr4_-_2935854 NM_001120	889	-	TSC_hg19_v1_chr4_-_2936515 BC001502 BC014979	1469	-	AK025413|ADD1|118|adducin 1 (alpha)##S70310|ADD1|118|adducin 1 (alpha)##BC013393|ADD1|118|adducin 1 (alpha)##AK309186|ADD1|118|adducin 1 (alpha)##NM_001119|ADD1|118|adducin 1 (alpha)##NM_014189|ADD1|118|adducin 1 (alpha)##NM_014190|ADD1|118|adducin 1 (alpha)##NM_176801|ADD1|118|adducin 1 (alpha)##EU176393|MFSD10|10227|major facilitator superfamily domain containing 10##EU176739|MFSD10|10227|major facilitator superfamily domain containing 10##L11669|MFSD10|10227|major facilitator superfamily domain containing 10##NM_001120|MFSD10|10227|major facilitator superfamily domain containing 10##BC001502|MFSD10|10227|major facilitator superfamily domain containing 10##BC014979|MFSD10|10227|major facilitator superfamily domain containing 10	0.0	
chr4	56602733	56602905	reg1014169.p1	3.846	+	DQ891295 DQ894479 BC012908 NM_006681 X76029 TSC_hg19_v1_chr4_-_56502465	-100407	-	BC034431 NM_152401	-144441	-	TSC_hg19_v1_chr4_-_56412988 BC126157 BC126159 AF011568 NM_004898 AK291708 AK223549	-189828	-	TSC_hg19_v1_chr4_+_56719840 BC094751 NM_001024924 NM_018261 NM_178237 AK001755 AK027413	117046	+	AK023683 NM_025009 TSC_hg19_v1_chr4_+_56815093 BC136535 BC136536	212272	+	AK126014 NM_020722	433541	+	DQ891295|NMU|10874|neuromedin U##DQ894479|NMU|10874|neuromedin U##BC012908|NMU|10874|neuromedin U##NM_006681|NMU|10874|neuromedin U##X76029|NMU|10874|neuromedin U##BC034431|PDCL2|132954|phosducin-like 2##NM_152401|PDCL2|132954|phosducin-like 2##BC126157|CLOCK|9575|clock homolog (mouse)##BC126159|CLOCK|9575|clock homolog (mouse)##AF011568|CLOCK|9575|clock homolog (mouse)##NM_004898|CLOCK|9575|clock homolog (mouse)##AK291708|CLOCK|9575|clock homolog (mouse)##AK223549|CLOCK|9575|clock homolog (mouse)##BC094751|EXOC1|55763|exocyst complex component 1##NM_001024924|EXOC1|55763|exocyst complex component 1##NM_018261|EXOC1|55763|exocyst complex component 1##NM_178237|EXOC1|55763|exocyst complex component 1##AK001755|EXOC1|55763|exocyst complex component 1##AK027413|EXOC1|55763|exocyst complex component 1##AK023683|CEP135|9662|centrosomal protein 135kDa##NM_025009|CEP135|9662|centrosomal protein 135kDa##BC136535|CEP135|9662|centrosomal protein 135kDa##BC136536|CEP135|9662|centrosomal protein 135kDa##AK126014|KIAA1211|57482|KIAA1211##NM_020722|KIAA1211|57482|KIAA1211	0.0	
chr5	130548264	130548443	reg1035546.p1	3.846	+	TSC_hg19_v1_chr5_+_130506676 BC037930 BC047079	-41682	+	AK000803 NM_181705 TSC_hg19_v1_chr5_+_130506648	-41710	+	TSC_hg19_v1_chr5_-_130501019 NM_005340	-47310	-	NM_001038702 NM_020240 TSC_hg19_v1_chr5_+_130599737	51368	+	TSC_hg19_v1_chr5_+_130599764 BC023555 BC050430	51403	+	AK312406 TSC_hg19_v1_chr5_+_130599768	51415	+	BC037930|LYRM7|90624|Lyrm7 homolog (mouse)##BC047079|LYRM7|90624|Lyrm7 homolog (mouse)##AK000803|LYRM7|90624|Lyrm7 homolog (mouse)##NM_181705|LYRM7|90624|Lyrm7 homolog (mouse)##NM_005340|HINT1|3094|histidine triad nucleotide binding protein 1##NM_001038702|CDC42SE2|56990|CDC42 small effector 2##NM_020240|CDC42SE2|56990|CDC42 small effector 2##BC023555|CDC42SE2|56990|CDC42 small effector 2##BC050430|CDC42SE2|56990|CDC42 small effector 2##AK312406|CDC42SE2|56990|CDC42 small effector 2	0.0	
chr5	150035982	150036162	reg1005698.p1	3.846	+	Y11072 TSC_hg19_v1_chr5_+_150027841	-8231	+	TSC_hg19_v1_chr5_+_150020221 NM_001109974 NM_007286 AK290178 BC042624 BC146665 AB028952 BC152538 BC142683 AF499136 AF499137	-15779	+	AK127049 NM_001166209	-38867	+	AK313873 NM_001122853 NM_133371 AJ300586	4350	+	AB463237 AM393639 TSC_hg19_v1_chr5_-_150080561 AK297019	44495	-	AL136933 TSC_hg19_v1_chr5_-_150080619 BC003402 AK001152 NM_018047	44560	-	Y11072|SYNPO|11346|synaptopodin##NM_001109974|SYNPO|11346|synaptopodin##NM_007286|SYNPO|11346|synaptopodin##AK290178|SYNPO|11346|synaptopodin##BC042624|SYNPO|11346|synaptopodin##BC146665|SYNPO|11346|synaptopodin##AB028952|SYNPO|11346|synaptopodin##BC152538|SYNPO|11346|synaptopodin##BC142683|SYNPO|11346|synaptopodin##AF499136|SYNPO|11346|synaptopodin##AF499137|SYNPO|11346|synaptopodin##AK127049|SYNPO|11346|synaptopodin##NM_001166209|SYNPO|11346|synaptopodin##AK313873|MYOZ3|91977|myozenin 3##NM_001122853|MYOZ3|91977|myozenin 3##NM_133371|MYOZ3|91977|myozenin 3##AJ300586|MYOZ3|91977|myozenin 3##AM393639|RBM22|55696|RNA binding motif protein 22##AK297019|RBM22|55696|RNA binding motif protein 22##AL136933|RBM22|55696|RNA binding motif protein 22##BC003402|RBM22|55696|RNA binding motif protein 22##AK001152|RBM22|55696|RNA binding motif protein 22##NM_018047|RBM22|55696|RNA binding motif protein 22	0.0	
chr6	2903300	2903480	reg1032211.p2	3.846	+	TSC_hg19_v1_chr6_-_2842202 AK304641 AK309765	-61193	-	TSC_hg19_v1_chr6_-_2842095 BC009015 NM_030666 M93056 AK298044 AK312973 AK223370 AK291327	-61308	-	TSC_hg19_v1_chr6_-_2840686 BT006928 AB590702	-62638	-	TSC_hg19_v1_chr6_-_2903544 BC002538 AB060690 L40378 AK314842 NM_004155	118	-	AK098566 TSC_hg19_v1_chr6_-_2971511	68024	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	68421	-	AK304641|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK309765|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BT006928|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC002538|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AB060690|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##L40378|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK314842|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##NM_004155|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK098566|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6	0.069448	
chr1	117591376	117591557	reg1032529.p1	3.845	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	-47061	+	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	-138824	+	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	-294359	+	AK291017 TSC_hg19_v1_chr1_+_117602939	11458	+	TSC_hg19_v1_chr1_+_117602948 AF073771 NM_003594 AF080255 BC015341 BC030058	11488	+	AK023243 AK222901 BC034943 AY669488 NM_001145635 NM_025188	72913	-	AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##AK291017|TTF2|8458|transcription termination factor, RNA polymerase II##AF073771|TTF2|8458|transcription termination factor, RNA polymerase II##NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II##AF080255|TTF2|8458|transcription termination factor, RNA polymerase II##BC015341|TTF2|8458|transcription termination factor, RNA polymerase II##BC030058|TTF2|8458|transcription termination factor, RNA polymerase II##AK023243|TRIM45|80263|tripartite motif containing 45##AK222901|TRIM45|80263|tripartite motif containing 45##BC034943|TRIM45|80263|tripartite motif containing 45##AY669488|TRIM45|80263|tripartite motif containing 45##NM_001145635|TRIM45|80263|tripartite motif containing 45##NM_025188|TRIM45|80263|tripartite motif containing 45	0.0	
chr11	45874503	45874596	reg1036621.p1	3.845	+	AK302865 NM_021117 TSC_hg19_v1_chr11_+_45869025 AK291260 BC041814 EU219622 CU692042 AB014558	-5536	+	NM_001127457 AK294904	-5878	+	AK074929 NM_018389 AK027394 AK027747 AK130181 AF326199	-47858	+	NM_005456 TSC_hg19_v1_chr11_+_45907138	32543	+	TSC_hg19_v1_chr11_+_45907201 BC068470 BC035920 AF074091	32735	+	NM_001080446	54283	-	AK302865|CRY2|1408|cryptochrome 2 (photolyase-like)##NM_021117|CRY2|1408|cryptochrome 2 (photolyase-like)##AK291260|CRY2|1408|cryptochrome 2 (photolyase-like)##BC041814|CRY2|1408|cryptochrome 2 (photolyase-like)##EU219622|CRY2|1408|cryptochrome 2 (photolyase-like)##AB014558|CRY2|1408|cryptochrome 2 (photolyase-like)##NM_001127457|CRY2|1408|cryptochrome 2 (photolyase-like)##AK294904|CRY2|1408|cryptochrome 2 (photolyase-like)##AK074929|SLC35C1|55343|solute carrier family 35, member C1##NM_018389|SLC35C1|55343|solute carrier family 35, member C1##AK027394|SLC35C1|55343|solute carrier family 35, member C1##AK027747|SLC35C1|55343|solute carrier family 35, member C1##AF326199|SLC35C1|55343|solute carrier family 35, member C1##NM_005456|MAPK8IP1|9479|mitogen-activated protein kinase 8 interacting protein 1##BC068470|MAPK8IP1|9479|mitogen-activated protein kinase 8 interacting protein 1##BC035920|MAPK8IP1|9479|mitogen-activated protein kinase 8 interacting protein 1##AF074091|MAPK8IP1|9479|mitogen-activated protein kinase 8 interacting protein 1##NM_001080446|C11orf94|143678|chromosome 11 open reading frame 94	0.026903	
chr1	160537666	160537754	reg1033680.p1	3.845	+	AB590474 AJ306388 AJ277141 AK313549 BC113893 BC114495 AK310085 AL832854 BC090928 AK300013 AK301026 AY358159 TSC_hg19_v1_chr1_-_160493043 AK303990 AK125624 NM_001184714 NM_001184715 NM_001184716 NM_052931	-44681	-	NM_020335 TSC_hg19_v1_chr1_+_160370394	-167331	+	M96739 AK313700 NM_005598 BC013789	-200846	+	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	11537	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	11578	-	AK314244 NM_003037 BC012602	79353	-	AJ306388|SLAMF6|114836|SLAM family member 6##AJ277141|SLAMF6|114836|SLAM family member 6##AK313549|SLAMF6|114836|SLAM family member 6##BC113893|SLAMF6|114836|SLAM family member 6##BC114495|SLAMF6|114836|SLAM family member 6##AK310085|SLAMF6|114836|SLAM family member 6##AL832854|SLAMF6|114836|SLAM family member 6##BC090928|SLAMF6|114836|SLAM family member 6##AK300013|SLAMF6|114836|SLAM family member 6##AK301026|SLAMF6|114836|SLAM family member 6##AY358159|SLAMF6|114836|SLAM family member 6##AK303990|SLAMF6|114836|SLAM family member 6##AK125624|SLAMF6|114836|SLAM family member 6##NM_001184714|SLAMF6|114836|SLAM family member 6##NM_001184715|SLAMF6|114836|SLAM family member 6##NM_001184716|SLAMF6|114836|SLAM family member 6##NM_052931|SLAMF6|114836|SLAM family member 6##NM_020335|VANGL2|57216|vang-like 2 (van gogh, Drosophila)##M96739|NHLH1|4807|nescient helix loop helix 1##AK313700|NHLH1|4807|nescient helix loop helix 1##NM_005598|NHLH1|4807|nescient helix loop helix 1##BC013789|NHLH1|4807|nescient helix loop helix 1##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1	0.0	
chr11	78131976	78132052	reg1018565.p2	3.845	+	TSC_hg19_v1_chr11_-_78128866 NM_080491	-3138	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	-3208	-	AB011143 BC152459 NM_012296	-79089	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	153778	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	153881	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	1019710	-	NM_080491|GAB2|9846|GRB2-associated binding protein 2##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)	0.0	
chr16	67876967	67877111	reg1033971.p2	3.845	+	L10378 L10379 TSC_hg19_v1_chr16_+_67876463 DQ892600 DQ895831 CU680258 EF036502	-557	+	TSC_hg19_v1_chr16_+_67876222 AK289367 BC012182	-779	+	TSC_hg19_v1_chr16_+_67876211 NM_020457	-824	+	TSC_hg19_v1_chr16_+_67880835 NM_005796 X07315 BC002348 AK293739 AK311822	3770	+	AK056097 NM_025082	4321	-	TSC_hg19_v1_chr16_+_67906967 NM_014329 AK128582	29906	+	L10378|THAP11|57215|THAP domain containing 11##L10379|THAP11|57215|THAP domain containing 11##DQ892600|THAP11|57215|THAP domain containing 11##DQ895831|THAP11|57215|THAP domain containing 11##EF036502|THAP11|57215|THAP domain containing 11##AK289367|THAP11|57215|THAP domain containing 11##BC012182|THAP11|57215|THAP domain containing 11##NM_020457|THAP11|57215|THAP domain containing 11##NM_005796|NUTF2|10204|nuclear transport factor 2##X07315|NUTF2|10204|nuclear transport factor 2##BC002348|NUTF2|10204|nuclear transport factor 2##AK293739|NUTF2|10204|nuclear transport factor 2##AK311822|NUTF2|10204|nuclear transport factor 2##AK056097|CENPT|80152|centromere protein T##NM_025082|CENPT|80152|centromere protein T##NM_014329|EDC4|23644|enhancer of mRNA decapping 4##AK128582|EDC4|23644|enhancer of mRNA decapping 4	0.223422	CTCF.p2:105:0.223
chr18	31879985	31880119	reg1030970.p2	3.845	+	AB017800 NM_001198546 NM_001198548 NM_003787	-76538	-	AK297185 BC000313 TSC_hg19_v1_chr18_-_31803319	-76809	-	NM_001198547	-77619	-	TSC_hg19_v1_chr18_+_32073264 NM_001198945 NM_001392 NM_032975 NM_032979 AK294746 U26742	193212	+	AJ009668 TSC_hg19_v1_chr18_+_32073374	193311	+	NM_001128175 NM_001198938 NM_001198939 NM_001198940 AK308410 AL833285 BC005300 AB209102	293252	+	AB017800|NOL4|8715|nucleolar protein 4##NM_001198546|NOL4|8715|nucleolar protein 4##NM_001198548|NOL4|8715|nucleolar protein 4##NM_003787|NOL4|8715|nucleolar protein 4##AK297185|NOL4|8715|nucleolar protein 4##BC000313|NOL4|8715|nucleolar protein 4##NM_001198547|NOL4|8715|nucleolar protein 4##NM_001198945|DTNA|1837|dystrobrevin, alpha##NM_001392|DTNA|1837|dystrobrevin, alpha##NM_032975|DTNA|1837|dystrobrevin, alpha##NM_032979|DTNA|1837|dystrobrevin, alpha##AK294746|DTNA|1837|dystrobrevin, alpha##U26742|DTNA|1837|dystrobrevin, alpha##AJ009668|DTNA|1837|dystrobrevin, alpha##NM_001128175|DTNA|1837|dystrobrevin, alpha##NM_001198938|DTNA|1837|dystrobrevin, alpha##NM_001198939|DTNA|1837|dystrobrevin, alpha##NM_001198940|DTNA|1837|dystrobrevin, alpha##AK308410|DTNA|1837|dystrobrevin, alpha##AL833285|DTNA|1837|dystrobrevin, alpha##BC005300|DTNA|1837|dystrobrevin, alpha##AB209102|DTNA|1837|dystrobrevin, alpha	0.383277	CTCF.p2:83:0.383
chr2	81493375	81493500	reg1035181.p1	3.845	+	TSC_hg19_v1_chr2_-_80531838 AK225779	-961594	-	TSC_hg19_v1_chr2_-_80531719 AK290512	-961712	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	-961912	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	3192933	-	AK296741 TSC_hg19_v1_chr2_-_84686396	3192958	-	NM_003849	3193148	-	AK225779|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit	0.9809	CTCF.p2:-19:0.981
chr4	54519795	54519976	reg1018851.p1	3.845	+	AK056823 NM_001126328 TSC_hg19_v1_chr4_-_54457761	-62141	-	BC022983 TSC_hg19_v1_chr4_-_54457654	-62242	-	TSC_hg19_v1_chr4_-_54424402 NM_032622	-95467	-	AB463552 DQ890711 DQ893893 TSC_hg19_v1_chr4_-_54930576	410641	-	TSC_hg19_v1_chr4_-_54930764 AF159423 BC034691	410850	-	TSC_hg19_v1_chr4_-_54930773 AK312427 NM_012110	410912	-	AK056823|LNX1|84708|ligand of numb-protein X 1##NM_001126328|LNX1|84708|ligand of numb-protein X 1##BC022983|LNX1|84708|ligand of numb-protein X 1##NM_032622|LNX1|84708|ligand of numb-protein X 1##DQ890711|CHIC2|26511|cysteine-rich hydrophobic domain 2##DQ893893|CHIC2|26511|cysteine-rich hydrophobic domain 2##AF159423|CHIC2|26511|cysteine-rich hydrophobic domain 2##BC034691|CHIC2|26511|cysteine-rich hydrophobic domain 2##AK312427|CHIC2|26511|cysteine-rich hydrophobic domain 2##NM_012110|CHIC2|26511|cysteine-rich hydrophobic domain 2	0.0	
chr5	14202820	14202946	reg1035163.p1	3.845	+	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	-59211	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-191013	-	AX800026 AY045575 NM_001369	-258295	-	TSC_hg19_v1_chr5_+_14488527 AK131423	285656	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	379017	+	TSC_hg19_v1_chr5_+_14581949 AK001989 BC011524 CU679940	379081	+	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A##AK001989|FAM105A|54491|family with sequence similarity 105, member A##BC011524|FAM105A|54491|family with sequence similarity 105, member A	0.0	
chr5	154640545	154640638	reg1041754.p1	3.845	+	NM_001099293 AK302388	-247305	+	TSC_hg19_v1_chr5_+_154320654 NM_001014990 NM_014180 AK000601 AK302784 CR933679 BC012565 AF161507 CU680362	-319942	+	TSC_hg19_v1_chr5_-_154317760 AB385260 AY063750 AK022748 BC113614 BC143724 BC036894 BC040931 AK074066 AK315101 NM_001252156 NM_015465	-322875	-	BX537948 NM_000337 NM_001128209 NM_172244	1113169	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	1113582	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	1749644	-	NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##NM_001014990|MRPL22|29093|mitochondrial ribosomal protein L22##NM_014180|MRPL22|29093|mitochondrial ribosomal protein L22##AK000601|MRPL22|29093|mitochondrial ribosomal protein L22##AK302784|MRPL22|29093|mitochondrial ribosomal protein L22##CR933679|MRPL22|29093|mitochondrial ribosomal protein L22##BC012565|MRPL22|29093|mitochondrial ribosomal protein L22##AF161507|MRPL22|29093|mitochondrial ribosomal protein L22##AY063750|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK022748|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC113614|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC143724|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC036894|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BC040931|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK074066|GEMIN5|25929|gem (nuclear organelle) associated protein 5##AK315101|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_001252156|GEMIN5|25929|gem (nuclear organelle) associated protein 5##NM_015465|GEMIN5|25929|gem (nuclear organelle) associated protein 5##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4	0.0	
chr7	22395705	22395771	reg1039738.p2	3.845	+	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-410256	-	AJ320497 NM_003777	-812906	+	AB591008 TSC_hg19_v1_chr7_+_21468356	-927414	+	AL833195 NM_012294	783	-	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	144109	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	371085	+	AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)	0.0	
chr7	65256947	65257048	reg1037935.p1	3.845	+	TSC_hg19_v1_chr7_-_65235746 BC066990	-21252	-	TSC_hg19_v1_chr7_+_65216060 BC052238 BC073761 BC122874 BC119782	-40914	+	TSC_hg19_v1_chr7_-_65215912 BX647963	-41079	-	TSC_hg19_v1_chr7_+_65338277 BC027734 NM_173517 BX647631 AY423045	81252	+	AK289522 TSC_hg19_v1_chr7_+_65338347	81348	+	TSC_hg19_v1_chr7_+_65338352 AK304077	81379	+	BC066990|LOC441242|441242|uncharacterized LOC441242##BC052238|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC073761|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC122874|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC119782|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC027734|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##NM_173517|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##BX647631|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##AY423045|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##AK289522|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##AK304077|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1	0.207329	CTCF.p2:-16:0.207
chr8	137072319	137072431	reg1036607.p1	3.845	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-602174	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-602717	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1347101	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2436731	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2853869	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3642907	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.337424	CTCF.p2:-6:0.337
chr9	132891047	132891114	reg1038194.p1	3.845	+	TSC_hg19_v1_chr9_+_132816199 AK026244 AK225456 BC030147 AF376725 AX776003 BC110518 AK293092 AB385490 AB046844	-74864	+	TSC_hg19_v1_chr9_+_132816196 BC143655	-74889	+	BC039728 NM_001136557 NM_001136558 NM_020960	-75096	+	AK024651 TSC_hg19_v1_chr9_+_132897386	6284	+	TSC_hg19_v1_chr9_+_132934685 BC004856 NM_014286 AF134479 AF186409 X84048 AB463656	43733	+	NM_001128826	71791	+	AK026244|GPR107|57720|G protein-coupled receptor 107##AK225456|GPR107|57720|G protein-coupled receptor 107##BC030147|GPR107|57720|G protein-coupled receptor 107##AF376725|GPR107|57720|G protein-coupled receptor 107##BC110518|GPR107|57720|G protein-coupled receptor 107##AK293092|GPR107|57720|G protein-coupled receptor 107##AB046844|GPR107|57720|G protein-coupled receptor 107##BC143655|GPR107|57720|G protein-coupled receptor 107##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107##AK024651|GPR107|57720|G protein-coupled receptor 107##BC004856|NCS1|23413|neuronal calcium sensor 1##NM_014286|NCS1|23413|neuronal calcium sensor 1##AF134479|NCS1|23413|neuronal calcium sensor 1##AF186409|NCS1|23413|neuronal calcium sensor 1##X84048|NCS1|23413|neuronal calcium sensor 1##NM_001128826|NCS1|23413|neuronal calcium sensor 1	0.0	
chr11	57559601	57559746	reg1024490.p1	3.844	+	NM_001085458 NM_001085459 NM_001085460 NM_001085461 NM_001085462 NM_001085463 NM_001085464 NM_001085465 NM_001085466 NM_001085467 NM_001085468 NM_001085469 NM_001206883 NM_001206884 NM_001206885 NM_001206886 NM_001206887 NM_001206888 NM_001206889 NM_001206890 NM_001206891 NM_001331 TSC_hg19_v1_chr11_+_57529331 AF062317 AF062318 AF062319 AF062320 AF062321 AF062322 AF062323 AF062324 AF062325 AF062326 AF062327 AF062328 AF062329 AF062330 AF062331 AF062332 AF062333 AF062334 AF062335 AF062336 AF062337 AF062338 AF062339 AF062340 AF062341 AF062342 AF062343 AF062344 BC075795	-30334	+	NM_001145101	-40421	-	TSC_hg19_v1_chr11_+_57508992 BC021122	-50673	+	BC110819 NM_001005212	231679	+	BC151146 BC151147 NM_001005186	238739	+	NM_001005211	327242	-	NM_001085458|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085459|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085460|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085461|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085462|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085463|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085464|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085465|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085466|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085467|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085468|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001085469|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206883|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206884|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206885|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206886|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206887|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206888|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206889|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206890|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001206891|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001331|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062317|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062318|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062319|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062320|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062321|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062322|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062323|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062324|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062325|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062326|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062327|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062328|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062329|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062330|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062331|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062332|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062333|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062334|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062335|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062336|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062337|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062338|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062339|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062340|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062341|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062342|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062343|CTNND1|1500|catenin (cadherin-associated protein), delta 1##AF062344|CTNND1|1500|catenin (cadherin-associated protein), delta 1##BC075795|CTNND1|1500|catenin (cadherin-associated protein), delta 1##NM_001145101|BTBD18|643376|BTB (POZ) domain containing 18##BC021122|C11orf31|280636|chromosome 11 open reading frame 31##BC110819|OR9Q1|219956|olfactory receptor, family 9, subfamily Q, member 1##NM_001005212|OR9Q1|219956|olfactory receptor, family 9, subfamily Q, member 1##BC151146|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##BC151147|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##NM_001005186|OR6Q1|219952|olfactory receptor, family 6, subfamily Q, member 1##NM_001005211|OR9I1|219954|olfactory receptor, family 9, subfamily I, member 1	0.0	
chr11	64633355	64633531	reg1042460.p2	3.844	+	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	-21354	-	AJ297488 AJ297489 NM_130803 NM_130804	-54678	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	-55249	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	12539	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	12711	-	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	13718	-	AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I##AY007161|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1	0.0	
chr14	33980308	33980440	reg1037740.p1	3.844	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-571884	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1181838	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-1433868	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	439775	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	951113	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	1028511	-	AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein	0.0	
chr19	45667645	45667794	reg1028798.p1	3.844	+	NM_198478	-4312	-	TSC_hg19_v1_chr19_+_45596436 NM_019121	-71297	+	TSC_hg19_v1_chr19_+_45596205 BC035704	-71504	+	TSC_hg19_v1_chr19_-_45681496 FJ418644 BC001907 NM_024108 BC004450 AF161407	13759	-	NM_212550 AK296695 TSC_hg19_v1_chr19_+_45682022	14294	+	AK225791 AK093466 AX748143 NM_138568	69748	-	NM_198478|NKPD1|284353|NTPase, KAP family P-loop domain containing 1##NM_019121|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##BC035704|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##FJ418644|TRAPPC6A|79090|trafficking protein particle complex 6A##BC001907|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_024108|TRAPPC6A|79090|trafficking protein particle complex 6A##BC004450|TRAPPC6A|79090|trafficking protein particle complex 6A##AF161407|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_212550|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3##AK296695|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3##AK225791|EXOC3L2|90332|exocyst complex component 3-like 2##AK093466|EXOC3L2|90332|exocyst complex component 3-like 2##NM_138568|EXOC3L2|90332|exocyst complex component 3-like 2	0.0	
chr2	122645938	122646018	reg1035077.p1	3.844	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-132741	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-151513	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-238333	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	2136886	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	4767729	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	4767814	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.0	
chr2	127534422	127534572	reg1001100.p1	3.844	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-120705	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-120790	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2751633	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	330244	-	BC039307 NM_001001665	428845	-	AK131190 TSC_hg19_v1_chr2_-_127977781	443220	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.0	
chr2	145206811	145206991	reg1030754.p2	3.844	+	BX647773 TSC_hg19_v1_chr2_-_145090075 BX647436 NM_001164629	-116837	-	BC017741 AK291357 TSC_hg19_v1_chr2_-_145090037 BC061699	-116869	-	AY281366 NM_001006636	-154842	-	AB193095 AB193096 AB463360 TSC_hg19_v1_chr2_-_145274968	68041	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	68302	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	70730	-	BX647773|GTDC1|79712|glycosyltransferase-like domain containing 1##BX647436|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001164629|GTDC1|79712|glycosyltransferase-like domain containing 1##BC017741|GTDC1|79712|glycosyltransferase-like domain containing 1##AK291357|GTDC1|79712|glycosyltransferase-like domain containing 1##BC061699|GTDC1|79712|glycosyltransferase-like domain containing 1##AY281366|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001006636|GTDC1|79712|glycosyltransferase-like domain containing 1##AB193095|ZEB2|9839|zinc finger E-box binding homeobox 2##AB193096|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2	0.0	
chr22	44725403	44725498	reg1035727.p1	3.844	+	NM_001099294	-16720	-	NM_001137606 TSC_hg19_v1_chr22_+_44577256	-148194	+	AK307299 TSC_hg19_v1_chr22_+_44577227 AK311264	-148226	+	AK126304 TSC_hg19_v1_chr22_-_44893199	167746	-	AB463098 CU013037 CU013325 CR456439 TSC_hg19_v1_chr22_-_44893542	168039	-	TSC_hg19_v1_chr22_-_44893996 BC030232 NM_032287 AK296479	168668	-	NM_001099294|KIAA1644|85352|KIAA1644##NM_001137606|PARVG|64098|parvin, gamma##AK307299|PARVG|64098|parvin, gamma##AK126304|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CU013037|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CU013325|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CR456439|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##BC030232|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##NM_032287|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##AK296479|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	0.0	
chr3	72213599	72213702	reg1032827.p2	3.844	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-379379	-	AK313656 NM_173359	-409727	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-410128	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	683898	-	BC017274 TSC_hg19_v1_chr3_-_72897575	683925	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	683942	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr4	57493299	57493411	reg1033645.p1	3.844	+	AY439003 NM_206919	-121981	+	TSC_hg19_v1_chr4_+_57333798 BC040134 BX537991 AF038851 BC046143 BC065018 AF069765 BC032609 AK225430 AK307397 AB590681 AF077019	-159565	+	TSC_hg19_v1_chr4_+_57333762 NM_006947 BC017057 BC056901 BC105583	-159594	+	AB019573 AB463756 AM393649 DQ892193 EU176669 TSC_hg19_v1_chr4_-_57522247	28802	-	BC014225 AB059410 TSC_hg19_v1_chr4_-_57522645 AF492680 AF492681 NM_001145459 NM_139211	29223	-	AF492675 NM_001145460 NM_032495 NM_139212	54503	-	AY439003|ARL9|132946|ADP-ribosylation factor-like 9##NM_206919|ARL9|132946|ADP-ribosylation factor-like 9##BC040134|SRP72|6731|signal recognition particle 72kDa##BX537991|SRP72|6731|signal recognition particle 72kDa##AF038851|SRP72|6731|signal recognition particle 72kDa##BC046143|SRP72|6731|signal recognition particle 72kDa##BC065018|SRP72|6731|signal recognition particle 72kDa##AF069765|SRP72|6731|signal recognition particle 72kDa##BC032609|SRP72|6731|signal recognition particle 72kDa##AK225430|SRP72|6731|signal recognition particle 72kDa##AK307397|SRP72|6731|signal recognition particle 72kDa##AF077019|SRP72|6731|signal recognition particle 72kDa##NM_006947|SRP72|6731|signal recognition particle 72kDa##BC017057|SRP72|6731|signal recognition particle 72kDa##BC056901|SRP72|6731|signal recognition particle 72kDa##BC105583|SRP72|6731|signal recognition particle 72kDa##AB019573|HOPX|84525|HOP homeobox##AM393649|HOPX|84525|HOP homeobox##DQ892193|HOPX|84525|HOP homeobox##EU176669|HOPX|84525|HOP homeobox##BC014225|HOPX|84525|HOP homeobox##AB059410|HOPX|84525|HOP homeobox##AF492680|HOPX|84525|HOP homeobox##AF492681|HOPX|84525|HOP homeobox##NM_001145459|HOPX|84525|HOP homeobox##NM_139211|HOPX|84525|HOP homeobox##AF492675|HOPX|84525|HOP homeobox##NM_001145460|HOPX|84525|HOP homeobox##NM_032495|HOPX|84525|HOP homeobox##NM_139212|HOPX|84525|HOP homeobox	0.028502	
chr5	124288033	124288132	reg1036267.p2	3.844	+	BC131507 AB033107 BC151226 NM_020747	-207294	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1440200	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1528938	-	NM_001146319 AK316288 AK300154	1407732	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1470761	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	1471105	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.0	
chr5	98396020	98396170	reg1012600.p1	3.844	+	BC054860 BC117134 NM_001270 AF006513	-133867	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-291054	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-1877108	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	1474978	+	AF529367 TSC_hg19_v1_chr5_+_99871306	1475175	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	1842833	-	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.0	
chr1	156786907	156786973	reg1028285.p2	3.843	+	AB528908 EU832614 EU832686 AF097744 AK222737 AY763100 AF051325 AJ000553 AY763099 BC012107 AK313706 NM_001161441 NM_001161442 NM_001161444 NM_003975	-371	-	AY763098 NM_001161443	-1002	-	AK126428 NM_001007792	-1435	+	AF064078 AK310760 NM_014215	41748	-	M23102 TSC_hg19_v1_chr1_+_156830655 BC136554 BC144239 NM_001012331 NM_002529 AK290759 AK312704 BC062580	43726	+	NM_001080471	76582	+	EU832614|SH2D2A|9047|SH2 domain containing 2A##EU832686|SH2D2A|9047|SH2 domain containing 2A##AF097744|SH2D2A|9047|SH2 domain containing 2A##AK222737|SH2D2A|9047|SH2 domain containing 2A##AY763100|SH2D2A|9047|SH2 domain containing 2A##AF051325|SH2D2A|9047|SH2 domain containing 2A##AJ000553|SH2D2A|9047|SH2 domain containing 2A##AY763099|SH2D2A|9047|SH2 domain containing 2A##BC012107|SH2D2A|9047|SH2 domain containing 2A##AK313706|SH2D2A|9047|SH2 domain containing 2A##NM_001161441|SH2D2A|9047|SH2 domain containing 2A##NM_001161442|SH2D2A|9047|SH2 domain containing 2A##NM_001161444|SH2D2A|9047|SH2 domain containing 2A##NM_003975|SH2D2A|9047|SH2 domain containing 2A##AY763098|SH2D2A|9047|SH2 domain containing 2A##NM_001161443|SH2D2A|9047|SH2 domain containing 2A##AK126428|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001007792|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AF064078|INSRR|3645|insulin receptor-related receptor##AK310760|INSRR|3645|insulin receptor-related receptor##NM_014215|INSRR|3645|insulin receptor-related receptor##M23102|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC136554|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC144239|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001012331|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_002529|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK290759|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK312704|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC062580|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001080471|PEAR1|375033|platelet endothelial aggregation receptor 1	0.0	
chr1	248806772	248806889	reg1035533.p2	3.843	+	NM_001001827 AB528813	-4271	-	NM_001001964 BC140749	-16371	-	NM_001004693 BC136937 BC136940	-49747	-	NM_001001824	7354	-	NM_001004734 BC137188 BC137189	38786	-	AY358453 TSC_hg19_v1_chr1_-_249120082 AK056382 NM_030645	313278	-	NM_001001827|OR2T35|403244|olfactory receptor, family 2, subfamily T, member 35##NM_001001964|OR2T11|127077|olfactory receptor, family 2, subfamily T, member 11##BC140749|OR2T11|127077|olfactory receptor, family 2, subfamily T, member 11##NM_001004693|OR2T10|127069|olfactory receptor, family 2, subfamily T, member 10##BC136937|OR2T10|127069|olfactory receptor, family 2, subfamily T, member 10##BC136940|OR2T10|127069|olfactory receptor, family 2, subfamily T, member 10##NM_001001824|OR2T27|403239|olfactory receptor, family 2, subfamily T, member 27##NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like##AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like	0.0	
chr1	42217112	42217292	reg1036953.p2	3.843	+	BC034393 X55177 M65199 NM_001956	-266883	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-509366	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-509417	-	TSC_hg19_v1_chr1_-_42384357 BC040942	167140	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	167171	-	TSC_hg19_v1_chr1_-_42501606 BC046120	284427	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.0	
chr16	1914001	1914115	reg1012505.p2	3.843	+	TSC_hg19_v1_chr16_+_1877223 BC063017 AL136720 NM_001018104 NM_001142398 NM_031208 AK094199 AB528126 AM392782 CR533499 CU687630	-36811	+	BC002627 AY576804 NM_001040427 NM_005326	-36891	-	TSC_hg19_v1_chr16_-_1876812 AK308825 BC000840 AK299173 AK298174 AK299993	-37230	-	TSC_hg19_v1_chr16_-_1922086 NM_152764	8032	-	TSC_hg19_v1_chr16_-_1922166 NM_001163560	8111	-	NM_001009606	54172	-	BC063017|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##AL136720|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##NM_001018104|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##NM_001142398|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##NM_031208|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##AK094199|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##AM392782|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##CR533499|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##BC002627|HAGH|3029|hydroxyacylglutathione hydrolase##AY576804|HAGH|3029|hydroxyacylglutathione hydrolase##NM_001040427|HAGH|3029|hydroxyacylglutathione hydrolase##NM_005326|HAGH|3029|hydroxyacylglutathione hydrolase##AK308825|HAGH|3029|hydroxyacylglutathione hydrolase##BC000840|HAGH|3029|hydroxyacylglutathione hydrolase##AK299173|HAGH|3029|hydroxyacylglutathione hydrolase##AK298174|HAGH|3029|hydroxyacylglutathione hydrolase##AK299993|HAGH|3029|hydroxyacylglutathione hydrolase##NM_152764|C16orf73|254528|chromosome 16 open reading frame 73##NM_001163560|C16orf73|254528|chromosome 16 open reading frame 73##NM_001009606|HS3ST6|64711|heparan sulfate (glucosamine) 3-O-sulfotransferase 6	0.0	
chr16	73091518	73091665	reg1031548.p1	3.843	+	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-9370	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-99886	-	TSC_hg19_v1_chr16_+_72699031 AK021563	-392527	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	995	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	1239102	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	1239180	+	L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.0	
chr16	89164674	89164803	reg1037501.p1	3.843	+	TSC_hg19_v1_chr16_+_89160285 BC028399 AK290963 BC064609 BC072391 AK075499	-4431	+	NM_001127214 NM_001243279 NM_174917 TSC_hg19_v1_chr16_+_89160259	-4501	+	TSC_hg19_v1_chr16_-_89119364 AK055272	-45369	-	TSC_hg19_v1_chr16_+_89213949 AK090408	49208	+	TSC_hg19_v1_chr16_+_89238171 D83542 NM_004933 AK308596 AK308631 BC008951 DQ893277 DQ896608	73461	+	NM_001242757	101790	-	BC028399|ACSF3|197322|acyl-CoA synthetase family member 3##AK290963|ACSF3|197322|acyl-CoA synthetase family member 3##BC064609|ACSF3|197322|acyl-CoA synthetase family member 3##BC072391|ACSF3|197322|acyl-CoA synthetase family member 3##AK075499|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001127214|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001243279|ACSF3|197322|acyl-CoA synthetase family member 3##NM_174917|ACSF3|197322|acyl-CoA synthetase family member 3##D83542|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##NM_004933|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##AK308631|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##BC008951|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##DQ893277|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##DQ896608|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##NM_001242757|SLC22A31|146429|solute carrier family 22, member 31	0.0	
chr17	76143957	76144083	reg1032262.p2	3.843	+	AY358510 NM_001163075	-1587	+	BC023597 NM_007267 TSC_hg19_v1_chr17_-_76128499	-15520	-	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	-17154	+	TSC_hg19_v1_chr17_+_76164661 AJ002308 AY358916 NM_004710 BC000407 BC105992 BC029755 DQ891832 DQ895019	20640	+	AB451268 AB451395 BT006941 AB591021 BC007872 BC007986 BC006484 AK314950 K02581 TSC_hg19_v1_chr17_-_76183133 NM_003258	39159	-	BC132824 NM_001010982 NM_001145526 TSC_hg19_v1_chr17_+_76183442 BC020920 BC142973 BX647783 BX648442 EU832465 EU832546 HQ258157	39403	+	AY358510|C17orf99|100141515|chromosome 17 open reading frame 99##NM_001163075|C17orf99|100141515|chromosome 17 open reading frame 99##BC023597|TMC6|11322|transmembrane channel-like 6##NM_007267|TMC6|11322|transmembrane channel-like 6##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8##AJ002308|SYNGR2|9144|synaptogyrin 2##AY358916|SYNGR2|9144|synaptogyrin 2##NM_004710|SYNGR2|9144|synaptogyrin 2##BC000407|SYNGR2|9144|synaptogyrin 2##BC105992|SYNGR2|9144|synaptogyrin 2##BC029755|SYNGR2|9144|synaptogyrin 2##DQ891832|SYNGR2|9144|synaptogyrin 2##DQ895019|SYNGR2|9144|synaptogyrin 2##AB451268|TK1|7083|thymidine kinase 1, soluble##AB451395|TK1|7083|thymidine kinase 1, soluble##BT006941|TK1|7083|thymidine kinase 1, soluble##BC007872|TK1|7083|thymidine kinase 1, soluble##BC007986|TK1|7083|thymidine kinase 1, soluble##BC006484|TK1|7083|thymidine kinase 1, soluble##AK314950|TK1|7083|thymidine kinase 1, soluble##K02581|TK1|7083|thymidine kinase 1, soluble##NM_003258|TK1|7083|thymidine kinase 1, soluble##BC132824|AFMID|125061|arylformamidase##NM_001010982|AFMID|125061|arylformamidase##NM_001145526|AFMID|125061|arylformamidase##BC020920|AFMID|125061|arylformamidase##BC142973|AFMID|125061|arylformamidase##BX648442|AFMID|125061|arylformamidase##EU832465|AFMID|125061|arylformamidase##EU832546|AFMID|125061|arylformamidase##HQ258157|AFMID|125061|arylformamidase	0.063077	
chr18	49301106	49301172	reg1039245.p1	3.843	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-577099	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-577427	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-577913	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	565402	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	565974	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2389853	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.0	
chr2	178483382	178483458	reg1031593.p1	3.843	+	TSC_hg19_v1_chr2_-_178417525 AK296828 AK055552 BC033795 NM_152517	-65935	-	TSC_hg19_v1_chr2_+_178257497 AK225439 AK314259 Y09443 BC141820 AY544121 AK296239 AK316240	-225791	+	AK309714 TSC_hg19_v1_chr2_+_178257487 NM_003659	-225991	+	TSC_hg19_v1_chr2_-_178483463 CU692122 AK057530 AK125104 BC048006	8	-	AK292395 BC042848 NM_152275	265	-	AJ251509 NM_001077196	270044	-	AK296828|TTC30B|150737|tetratricopeptide repeat domain 30B##AK055552|TTC30B|150737|tetratricopeptide repeat domain 30B##BC033795|TTC30B|150737|tetratricopeptide repeat domain 30B##NM_152517|TTC30B|150737|tetratricopeptide repeat domain 30B##AK314259|AGPS|8540|alkylglycerone phosphate synthase##Y09443|AGPS|8540|alkylglycerone phosphate synthase##BC141820|AGPS|8540|alkylglycerone phosphate synthase##AY544121|AGPS|8540|alkylglycerone phosphate synthase##AK296239|AGPS|8540|alkylglycerone phosphate synthase##AK316240|AGPS|8540|alkylglycerone phosphate synthase##AK309714|AGPS|8540|alkylglycerone phosphate synthase##NM_003659|AGPS|8540|alkylglycerone phosphate synthase##AK057530|TTC30A|92104|tetratricopeptide repeat domain 30A##AK125104|TTC30A|92104|tetratricopeptide repeat domain 30A##BC048006|TTC30A|92104|tetratricopeptide repeat domain 30A##AK292395|TTC30A|92104|tetratricopeptide repeat domain 30A##BC042848|TTC30A|92104|tetratricopeptide repeat domain 30A##NM_152275|TTC30A|92104|tetratricopeptide repeat domain 30A##AJ251509|PDE11A|50940|phosphodiesterase 11A##NM_001077196|PDE11A|50940|phosphodiesterase 11A	0.0	
chr1	144535330	144535444	reg1037610.p1	3.842	+	TSC_hg19_v1_chr1_-_144521169 AK090660 AX746564	-14158	-	TSC_hg19_v1_chr1_-_144520998 BC063535 BC021732	-14381	-	BC061517 BC073170 BC009950 BC094809 TSC_hg19_v1_chr1_-_144520932	-14456	-	TSC_hg19_v1_chr1_+_144593695 BX538005 AK308678	58311	+	AY894562 AY894567 AY894568 AY894572 AY894574 NM_001037675	79571	+	CU687328 TSC_hg19_v1_chr1_-_144931874 BC078660	396424	-	AK090660|FAM91A2|57234|family with sequence similarity 91, member A2##BC063535|LOC728855|728855|uncharacterized LOC728855##BC021732|LOC728855|728855|uncharacterized LOC728855##BC061517|LOC728855|728855|uncharacterized LOC728855##BC073170|LOC728855|728855|uncharacterized LOC728855##BC009950|LOC728855|728855|uncharacterized LOC728855##BC094809|LOC728855|728855|uncharacterized LOC728855##BX538005|NBPF10|100132406|neuroblastoma breakpoint family, member 10##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894567|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894568|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894572|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894574|NBPF9|400818|neuroblastoma breakpoint family, member 9##NM_001037675|NBPF9|400818|neuroblastoma breakpoint family, member 9##BC078660|PDE4DIP|9659|phosphodiesterase 4D interacting protein	0.010393	
chr12	129178413	129178498	reg1033700.p2	3.842	+	NM_001136103	-426508	+	NM_052907	-3367294	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-3628387	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	129988	-	BC043528 TSC_hg19_v1_chr12_+_129337985	159529	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	159632	+	NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.034551	
chr1	226271094	226271270	reg1034662.p1	3.842	+	TSC_hg19_v1_chr1_+_226250433 BC081560 BC081561	-20749	+	TSC_hg19_v1_chr1_+_226250421 AK291102 AK293541 BC029405 BC067757 BC095447 M11354 BC066901	-20756	+	TSC_hg19_v1_chr1_+_226250416 D28384	-20766	+	TSC_hg19_v1_chr1_+_226271319 BC032899	178	+	BC039575 TSC_hg19_v1_chr1_-_226374400	103218	-	AY150218 TSC_hg19_v1_chr1_-_226374401 BC045533 BC060792 NM_022735 AK025520 AK314468 AB043587	103235	-	BC081560|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC081561|H3F3A|3020|H3 histone, family 3A##AK291102|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##AK293541|H3F3A|3020|H3 histone, family 3A##BC029405|H3F3A|3020|H3 histone, family 3A##BC067757|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC095447|H3F3A|3020|H3 histone, family 3A##M11354|H3F3A|3020|H3 histone, family 3A##BC066901|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##D28384|H3F3A|3020|H3 histone, family 3A##BC039575|ACBD3|64746|acyl-CoA binding domain containing 3##AY150218|ACBD3|64746|acyl-CoA binding domain containing 3##BC045533|ACBD3|64746|acyl-CoA binding domain containing 3##BC060792|ACBD3|64746|acyl-CoA binding domain containing 3##NM_022735|ACBD3|64746|acyl-CoA binding domain containing 3##AK025520|ACBD3|64746|acyl-CoA binding domain containing 3##AK314468|ACBD3|64746|acyl-CoA binding domain containing 3##AB043587|ACBD3|64746|acyl-CoA binding domain containing 3	0.0	
chr13	33161394	33161553	reg1032295.p1	3.842	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-790	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-834	+	TSC_hg19_v1_chr13_+_33160610 AL137201	-855	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	429050	+	AY082590 BC046563 NM_001243466 NM_178007	598742	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	618691	-	BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr16	10906330	10906432	reg1033102.p1	3.842	+	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-68677	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-117616	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	-231891	-	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	6167	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	64731	+	BC071683 TSC_hg19_v1_chr16_-_11036171	129785	-	AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)	0.0	
chr17	65373145	65373326	reg1032805.p1	3.842	+	TSC_hg19_v1_chr17_-_65362694 BC019062 AB003103 AK308883 AK307821 AK091198 AX746843 NM_002816 NM_174871	-10530	-	CU676364 AB384721 DQ892821 DQ896067 TSC_hg19_v1_chr17_-_65362658 AK222679 BC065826	-10587	-	TSC_hg19_v1_chr17_-_65241313 NM_014877	-131923	-	TSC_hg19_v1_chr17_+_65373455 BC037261	174	+	AK290838 TSC_hg19_v1_chr17_+_65373587	353	+	BC007905 NM_012417 NM_181671	688	+	BC019062|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AB003103|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK308883|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK307821|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK091198|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##NM_002816|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##NM_174871|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##DQ892821|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##DQ896067|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##AK222679|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##BC065826|PSMD12|5718|proteasome (prosome, macropain) 26S subunit, non-ATPase, 12##NM_014877|HELZ|9931|helicase with zinc finger##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1	0.0	
chr19	9542258	9542376	reg1034584.p2	3.842	+	NM_001172651 AK302274	-55279	+	NM_003451 U37263	-68622	+	NM_001202425 U37251	-106932	+	TSC_hg19_v1_chr19_-_9546235 BC112919 NM_006631 NM_198058	3897	-	BC101039 BC101040 BC101041 BC101042 AK056548 NM_152476	66943	-	TSC_hg19_v1_chr19_-_9649291 AB209837 BC001791 NM_024106	106981	-	NM_001172651|ZNF177|7730|zinc finger protein 177##AK302274|ZNF177|7730|zinc finger protein 177##NM_003451|ZNF177|7730|zinc finger protein 177##U37263|ZNF177|7730|zinc finger protein 177##NM_001202425|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough##U37251|ZNF559-ZNF177|100529215|ZNF559-ZNF177 readthrough##BC112919|ZNF266|10781|zinc finger protein 266##NM_006631|ZNF266|10781|zinc finger protein 266##NM_198058|ZNF266|10781|zinc finger protein 266##BC101039|ZNF560|147741|zinc finger protein 560##BC101040|ZNF560|147741|zinc finger protein 560##BC101041|ZNF560|147741|zinc finger protein 560##BC101042|ZNF560|147741|zinc finger protein 560##AK056548|ZNF560|147741|zinc finger protein 560##NM_152476|ZNF560|147741|zinc finger protein 560##AB209837|ZNF426|79088|zinc finger protein 426##BC001791|ZNF426|79088|zinc finger protein 426##NM_024106|ZNF426|79088|zinc finger protein 426	0.354917	CTCF.p2:15:0.355
chr2	121842495	121842676	reg1013895.p1	3.842	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	-287692	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-738788	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-832081	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	200188	-	TSC_hg19_v1_chr2_-_122159142 CR749627	316570	-	AK297259 TSC_hg19_v1_chr2_-_122247924	405334	-	NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1##AK297259|CLASP1|23332|cytoplasmic linker associated protein 1	0.0	
chr21	46656547	46656662	reg1033465.p1	3.842	+	TSC_hg19_v1_chr21_+_46572480 FJ169506	-84106	+	TSC_hg19_v1_chr21_+_46494502 AY082339 BC030663 NM_001112 NM_001160230 NM_015833 NM_015834 AB194369 AB194370 AB194371 AB194372 AB194373 AF525422 AF533142 AY135659 U76420 U76421 U76422 BC065545 U82120	-162021	+	TSC_hg19_v1_chr21_+_46359968 CU679303	-296635	+	TSC_hg19_v1_chr21_-_46707808 BC064623 AJ575591 AL110285 AB023175 AJ302079 AJ302080 AY066015 AK294966 AK290732 AK298080 NM_015227 NM_133635	51197	-	TSC_hg19_v1_chr21_+_46707955 BC022830 BC033767	51371	+	TSC_hg19_v1_chr21_+_46825079 AK130835 AF018082 NM_130445 BC063833	168464	+	FJ169506|ADARB1|104|adenosine deaminase, RNA-specific, B1##AY082339|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC030663|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001112|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_001160230|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015833|ADARB1|104|adenosine deaminase, RNA-specific, B1##NM_015834|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194369|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194370|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194371|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194372|ADARB1|104|adenosine deaminase, RNA-specific, B1##AB194373|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF525422|ADARB1|104|adenosine deaminase, RNA-specific, B1##AF533142|ADARB1|104|adenosine deaminase, RNA-specific, B1##AY135659|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76420|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76421|ADARB1|104|adenosine deaminase, RNA-specific, B1##U76422|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC065545|ADARB1|104|adenosine deaminase, RNA-specific, B1##U82120|ADARB1|104|adenosine deaminase, RNA-specific, B1##BC064623|POFUT2|23275|protein O-fucosyltransferase 2##AJ575591|POFUT2|23275|protein O-fucosyltransferase 2##AL110285|POFUT2|23275|protein O-fucosyltransferase 2##AB023175|POFUT2|23275|protein O-fucosyltransferase 2##AJ302079|POFUT2|23275|protein O-fucosyltransferase 2##AJ302080|POFUT2|23275|protein O-fucosyltransferase 2##AY066015|POFUT2|23275|protein O-fucosyltransferase 2##AK294966|POFUT2|23275|protein O-fucosyltransferase 2##AK290732|POFUT2|23275|protein O-fucosyltransferase 2##AK298080|POFUT2|23275|protein O-fucosyltransferase 2##NM_015227|POFUT2|23275|protein O-fucosyltransferase 2##NM_133635|POFUT2|23275|protein O-fucosyltransferase 2##BC022830|LOC642852|642852|uncharacterized LOC642852##BC033767|LOC642852|642852|uncharacterized LOC642852##AK130835|COL18A1|80781|collagen, type XVIII, alpha 1##AF018082|COL18A1|80781|collagen, type XVIII, alpha 1##NM_130445|COL18A1|80781|collagen, type XVIII, alpha 1##BC063833|COL18A1|80781|collagen, type XVIII, alpha 1	0.314557	CTCF.p2:6:0.315
chr2	55523863	55524043	reg1038466.p2	3.842	+	BC082973 TSC_hg19_v1_chr2_-_55496365 AK225184 BC054048 AF494407 AK307993 NM_002453	-27588	-	BC002667 BC009845 BC067352 NM_001005369 BC064977 L34600 TSC_hg19_v1_chr2_-_55496330 BC017243 BC039848	-27626	-	AY952889 X63237 CU674684 AB528950 M10939 TSC_hg19_v1_chr2_+_55459990	-63984	+	TSC_hg19_v1_chr2_-_55559749 BC056885	35833	-	TSC_hg19_v1_chr2_-_55646993 BC014905 BC041160 BC142646 BC142700 AK025723 NM_001135597 NM_018084	123051	-	TSC_hg19_v1_chr2_+_55746786 AY358097 NM_080667 AK309764 AK308776 BC010011 CU679569 DQ893082 DQ896343	222873	+	BC082973|MTIF2|4528|mitochondrial translational initiation factor 2##AK225184|MTIF2|4528|mitochondrial translational initiation factor 2##BC054048|MTIF2|4528|mitochondrial translational initiation factor 2##AF494407|MTIF2|4528|mitochondrial translational initiation factor 2##AK307993|MTIF2|4528|mitochondrial translational initiation factor 2##NM_002453|MTIF2|4528|mitochondrial translational initiation factor 2##BC002667|MTIF2|4528|mitochondrial translational initiation factor 2##BC009845|MTIF2|4528|mitochondrial translational initiation factor 2##BC067352|MTIF2|4528|mitochondrial translational initiation factor 2##NM_001005369|MTIF2|4528|mitochondrial translational initiation factor 2##BC064977|MTIF2|4528|mitochondrial translational initiation factor 2##L34600|MTIF2|4528|mitochondrial translational initiation factor 2##BC017243|MTIF2|4528|mitochondrial translational initiation factor 2##BC039848|MTIF2|4528|mitochondrial translational initiation factor 2##AY952889|RPS27A|6233|ribosomal protein S27a##X63237|RPS27A|6233|ribosomal protein S27a##M10939|RPS27A|6233|ribosomal protein S27a##BC056885|CCDC88A|55704|coiled-coil domain containing 88A##BC014905|CCDC88A|55704|coiled-coil domain containing 88A##BC041160|CCDC88A|55704|coiled-coil domain containing 88A##BC142646|CCDC88A|55704|coiled-coil domain containing 88A##BC142700|CCDC88A|55704|coiled-coil domain containing 88A##AK025723|CCDC88A|55704|coiled-coil domain containing 88A##NM_001135597|CCDC88A|55704|coiled-coil domain containing 88A##NM_018084|CCDC88A|55704|coiled-coil domain containing 88A##AY358097|CCDC104|112942|coiled-coil domain containing 104##NM_080667|CCDC104|112942|coiled-coil domain containing 104##AK309764|CCDC104|112942|coiled-coil domain containing 104##AK308776|CCDC104|112942|coiled-coil domain containing 104##BC010011|CCDC104|112942|coiled-coil domain containing 104##DQ893082|CCDC104|112942|coiled-coil domain containing 104##DQ896343|CCDC104|112942|coiled-coil domain containing 104	0.0	
chr6	11722623	11722753	reg1033855.p1	3.842	+	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-184190	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-340148	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-489778	-	NM_001143948 NM_032744	56591	-	NM_002114	290035	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	567905	+	NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.050114	
chr7	130003454	130003559	reg1037588.p1	3.842	+	NM_001127441 NM_001127442 NM_080385 AK093288 AK315256 AX748034 BC039362 AY155230 BC053681 BC042996 AK131191 AY155229	-18842	+	AK290993 NM_001163446 NM_016352 BC052289 AK310933 AK298553 AK298550 AK299023 AY358699 AF095719 AB590729 CU690898 HQ448429	-70510	+	BC007009 NM_001869 BC014571 BC015140 AK293378 U19977 DQ893811 CU675491 BT007403	-96792	+	NM_001868 AK131054 AK291493 AK293366 BC005279 X67318 CU675077 DQ890565 DQ893728 BT007313	16819	+	BC056162 AK314676 TSC_hg19_v1_chr7_-_130080886 BC018789 AK026098 AJ278890 NM_018718 AK298618 AK311382 AF429308 AF429309	77371	-	TSC_hg19_v1_chr7_+_130126173 AK098397 NM_177524 CR627364 BC090049	122610	+	NM_001127441|CPA5|93979|carboxypeptidase A5##NM_001127442|CPA5|93979|carboxypeptidase A5##NM_080385|CPA5|93979|carboxypeptidase A5##AK093288|CPA5|93979|carboxypeptidase A5##AK315256|CPA5|93979|carboxypeptidase A5##BC039362|CPA5|93979|carboxypeptidase A5##AY155230|CPA5|93979|carboxypeptidase A5##BC053681|CPA5|93979|carboxypeptidase A5##BC042996|CPA5|93979|carboxypeptidase A5##AK131191|CPA5|93979|carboxypeptidase A5##AY155229|CPA5|93979|carboxypeptidase A5##AK290993|CPA4|51200|carboxypeptidase A4##NM_001163446|CPA4|51200|carboxypeptidase A4##NM_016352|CPA4|51200|carboxypeptidase A4##BC052289|CPA4|51200|carboxypeptidase A4##AK310933|CPA4|51200|carboxypeptidase A4##AK298553|CPA4|51200|carboxypeptidase A4##AK298550|CPA4|51200|carboxypeptidase A4##AK299023|CPA4|51200|carboxypeptidase A4##AY358699|CPA4|51200|carboxypeptidase A4##AF095719|CPA4|51200|carboxypeptidase A4##HQ448429|CPA4|51200|carboxypeptidase A4##BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)##AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)##U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)##DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)##BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001868|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK131054|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK291493|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK293366|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC005279|CPA1|1357|carboxypeptidase A1 (pancreatic)##X67318|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ890565|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ893728|CPA1|1357|carboxypeptidase A1 (pancreatic)##BT007313|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC056162|CEP41|95681|centrosomal protein 41kDa##AK314676|CEP41|95681|centrosomal protein 41kDa##BC018789|CEP41|95681|centrosomal protein 41kDa##AK026098|CEP41|95681|centrosomal protein 41kDa##AJ278890|CEP41|95681|centrosomal protein 41kDa##NM_018718|CEP41|95681|centrosomal protein 41kDa##AK298618|CEP41|95681|centrosomal protein 41kDa##AK311382|CEP41|95681|centrosomal protein 41kDa##AF429308|CEP41|95681|centrosomal protein 41kDa##AF429309|CEP41|95681|centrosomal protein 41kDa##AK098397|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_177524|MEST|4232|mesoderm specific transcript homolog (mouse)##CR627364|MEST|4232|mesoderm specific transcript homolog (mouse)##BC090049|MEST|4232|mesoderm specific transcript homolog (mouse)	0.0	
chr9	114784628	114784708	reg1041162.p2	3.842	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-125201	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-125554	+	AL833535 NM_173521	-238893	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	152852	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	310619	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	311181	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chrX	3880613	3880721	reg1030460.p1	3.842	+	TSC_hg19_v1_chrX_-_3631668 NM_005044	-248949	-	TSC_hg19_v1_chrX_-_3631645 X85545	-249022	-	TSC_hg19_v1_chrX_-_3631619 BC041073	-249125	-	AB033086 AF376803 AX773938 NM_020742	2265220	-	AK055471 BC034018 NM_181332	2266013	-	AF167078 AF167079 NM_016379	2572491	-	NM_005044|PRKX|5613|protein kinase, X-linked##X85545|PRKX|5613|protein kinase, X-linked##BC041073|PRKX|5613|protein kinase, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A	0.010977	
chr11	19454394	19454563	reg1037616.p1	3.841	+	AB063115 NM_001111018 AJ488205	-82163	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-191277	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-192003	-	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	280388	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	589910	+	TSC_hg19_v1_chr11_+_20049136 AK307574	594654	+	AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2	0.0	
chr12	51422007	51422111	reg1035602.p1	3.841	+	BC002592 AJ493662 NM_001174125	-25	-	TSC_hg19_v1_chr12_-_51420168 AB062284 AB004857 AF064484 AF046997 BC100014 AK128640 AK315987 NM_000617 NM_001174126 NM_001174127 NM_001174128	-1912	-	AK094735 NM_001174129	-2136	-	NM_001243689 NM_015416 AF329277 AK301955 TSC_hg19_v1_chr12_+_51442109 AF195651 AK000639 AK304707 AK315119 AK127540 AK301898 AK225836 BC064943 AK057866 AF315598 AY259835 AY259836 CU687972	20052	+	BC017221 TSC_hg19_v1_chr12_-_51477184 AK313080	55127	-	TSC_hg19_v1_chr12_-_51477380 AJ298133 NM_030809	55317	-	BC002592|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AJ493662|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174125|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AB062284|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AB004857|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AF064484|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AF046997|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##BC100014|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AK128640|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AK315987|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_000617|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174126|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174127|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174128|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AK094735|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174129|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001243689|LETMD1|25875|LETM1 domain containing 1##NM_015416|LETMD1|25875|LETM1 domain containing 1##AF329277|LETMD1|25875|LETM1 domain containing 1##AK301955|LETMD1|25875|LETM1 domain containing 1##AF195651|LETMD1|25875|LETM1 domain containing 1##AK000639|LETMD1|25875|LETM1 domain containing 1##AK304707|LETMD1|25875|LETM1 domain containing 1##AK315119|LETMD1|25875|LETM1 domain containing 1##AK127540|LETMD1|25875|LETM1 domain containing 1##AK301898|LETMD1|25875|LETM1 domain containing 1##AK225836|LETMD1|25875|LETM1 domain containing 1##BC064943|LETMD1|25875|LETM1 domain containing 1##AK057866|LETMD1|25875|LETM1 domain containing 1##AF315598|LETMD1|25875|LETM1 domain containing 1##AY259835|LETMD1|25875|LETM1 domain containing 1##AY259836|LETMD1|25875|LETM1 domain containing 1##BC017221|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##AK313080|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2	0.0	
chr13	109787516	109787627	reg1036273.p1	3.841	+	AB290159 AK127806 NM_001198950	-506002	+	AB020672 BC146791 NM_015011 AL834447	-539057	+	DQ857728 TSC_hg19_v1_chr13_+_108955871	-831754	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	651337	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	1015164	-	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	1171938	-	AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1	0.0	
chr13	28631584	28631678	reg1034543.p2	3.841	+	NM_001105577	-68858	-	TSC_hg19_v1_chr13_-_28543453 Y13709	-88168	-	TSC_hg19_v1_chr13_-_28543325 BC014461 NM_001265	-88323	-	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	43056	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	81035	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	437613	-	NM_001105577|PRHOXNB|646625|parahox cluster neighbor##Y13709|CDX2|1045|caudal type homeobox 2##BC014461|CDX2|1045|caudal type homeobox 2##NM_001265|CDX2|1045|caudal type homeobox 2##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	0.0	
chr15	48937189	48937330	reg1039052.p1	3.841	+	TSC_hg19_v1_chr15_-_48937070 L13923	-176	-	TSC_hg19_v1_chr15_+_48624363 AK291515 NM_001948 AK312122 U31930 U62891 L11877 AB049113 M89913 DQ891191 DQ894375 CR541720 CR541781	-312858	+	TSC_hg19_v1_chr15_+_48623625 NM_001025248 NM_001025249 AK000629 BC070339 BC110377 AK298464 U90223 AB528727	-313595	+	TSC_hg19_v1_chr15_-_48937907 BC146854 AK304737 BC094721 NM_000138 X63556	670	-	BC117182 TSC_hg19_v1_chr15_-_49103277 AB020719 BC069186 AK303805 BX648822 BC107721 NM_001194998 NM_014985	166003	-	TSC_hg19_v1_chr15_+_49170330 NM_014335 BC114944 BC114946 AK315365 AF092135 AF109873 AF349444 AK098383 AL109701 BC024151 AL357456 BC007944 AB527924 AF274951	233113	+	L13923|FBN1|2200|fibrillin 1##AK291515|DUT|1854|deoxyuridine triphosphatase##NM_001948|DUT|1854|deoxyuridine triphosphatase##AK312122|DUT|1854|deoxyuridine triphosphatase##U31930|DUT|1854|deoxyuridine triphosphatase##U62891|DUT|1854|deoxyuridine triphosphatase##L11877|DUT|1854|deoxyuridine triphosphatase##AB049113|DUT|1854|deoxyuridine triphosphatase##M89913|DUT|1854|deoxyuridine triphosphatase##DQ891191|DUT|1854|deoxyuridine triphosphatase##DQ894375|DUT|1854|deoxyuridine triphosphatase##CR541720|DUT|1854|deoxyuridine triphosphatase##CR541781|DUT|1854|deoxyuridine triphosphatase##NM_001025248|DUT|1854|deoxyuridine triphosphatase##NM_001025249|DUT|1854|deoxyuridine triphosphatase##AK000629|DUT|1854|deoxyuridine triphosphatase##BC070339|DUT|1854|deoxyuridine triphosphatase##BC110377|DUT|1854|deoxyuridine triphosphatase##AK298464|DUT|1854|deoxyuridine triphosphatase##U90223|DUT|1854|deoxyuridine triphosphatase##BC146854|FBN1|2200|fibrillin 1##AK304737|FBN1|2200|fibrillin 1##BC094721|FBN1|2200|fibrillin 1##NM_000138|FBN1|2200|fibrillin 1##X63556|FBN1|2200|fibrillin 1##BC117182|CEP152|22995|centrosomal protein 152kDa##AB020719|CEP152|22995|centrosomal protein 152kDa##BC069186|CEP152|22995|centrosomal protein 152kDa##AK303805|CEP152|22995|centrosomal protein 152kDa##BX648822|CEP152|22995|centrosomal protein 152kDa##BC107721|CEP152|22995|centrosomal protein 152kDa##NM_001194998|CEP152|22995|centrosomal protein 152kDa##NM_014985|CEP152|22995|centrosomal protein 152kDa##NM_014335|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114946|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK315365|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF092135|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF109873|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF349444|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK098383|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL109701|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC024151|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL357456|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC007944|EID1|23741|EP300 interacting inhibitor of differentiation 1	0.0	
chr22	28508860	28509030	reg1032100.p1	3.841	+	TSC_hg19_v1_chr22_-_28315245 BC018704 D30037 AK313064 CR456541 NM_012399	-193681	-	TSC_hg19_v1_chr22_-_28315203 BC031427	-193738	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	-193771	-	TSC_hg19_v1_chr22_-_29075801 NM_001145418	566848	-	BC004207 AK289360 CR456418 NM_001005735 NM_007194 NM_145862 AK290754 AB164374	628872	-	BC000004 TSC_hg19_v1_chr22_+_29138056 NM_172002 BC065569 CR456462 AY191719 AB528150 CU013013 CU013301	629116	+	BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta##D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta##CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_001145418|TTC28|23331|tetratricopeptide repeat domain 28##BC004207|CHEK2|11200|checkpoint kinase 2##AK289360|CHEK2|11200|checkpoint kinase 2##CR456418|CHEK2|11200|checkpoint kinase 2##NM_001005735|CHEK2|11200|checkpoint kinase 2##NM_007194|CHEK2|11200|checkpoint kinase 2##NM_145862|CHEK2|11200|checkpoint kinase 2##AK290754|CHEK2|11200|checkpoint kinase 2##NM_172002|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##BC065569|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##CR456462|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##AY191719|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)	0.014503	
chr3	105585567	105585652	reg1038911.p1	3.841	+	CR749655 TSC_hg19_v1_chr3_-_105421064	-164555	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-499787	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	-500029	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	2198	-	TSC_hg19_v1_chr3_-_106959482 BC036229	1373870	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	1373983	+	CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595	0.0	
chr3	51976676	51976856	reg1010781.p3	3.841	+	TSC_hg19_v1_chr3_+_51976389 NM_001003931 NM_005485 Y16836 AB208803 AY126341 AF083068 AB529017	-278	+	TSC_hg19_v1_chr3_-_51975920 DQ895802 EU176364 BC023662 AJ001340 BC009879 NM_004704 BC001113 BC010048 BC021032 AK313696	-825	-	AK131018 BC029595 BC034228 NM_152397	-39406	-	TSC_hg19_v1_chr3_+_51977304 BC014260 CU676947	562	+	NM_080865 AB032600 BC026357	12596	+	AF141340 TSC_hg19_v1_chr3_-_51994009	17216	-	NM_001003931|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##NM_005485|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##Y16836|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##AB208803|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##AY126341|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##AF083068|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##DQ895802|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##EU176364|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC023662|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##AJ001340|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC009879|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##NM_004704|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC001113|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC010048|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC021032|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##AK313696|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##AK131018|IQCF1|132141|IQ motif containing F1##BC029595|IQCF1|132141|IQ motif containing F1##BC034228|IQCF1|132141|IQ motif containing F1##NM_152397|IQCF1|132141|IQ motif containing F1##BC014260|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##NM_080865|GPR62|118442|G protein-coupled receptor 62##AB032600|GPR62|118442|G protein-coupled receptor 62##BC026357|GPR62|118442|G protein-coupled receptor 62##AF141340|PCBP4|57060|poly(rC) binding protein 4	0.0	
chr6	28048625	28048806	reg1031685.p2	3.841	+	NM_003447	-234	+	BC109251 BC110457 NM_012367	-123697	+	BC136881 BC136901 NM_033057	-168542	-	AK025844 AK294017 AK309837 NM_025231 TSC_hg19_v1_chr6_+_28092406 BC004255	43684	+	TSC_hg19_v1_chr6_-_28104623 AK309286 BC043177	55883	-	TSC_hg19_v1_chr6_+_28109660 AB208793 BC096282 BC096283 BC096284 BC130032 NM_006298 U57796	60976	+	NM_003447|ZNF165|7718|zinc finger protein 165##BC109251|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##BC110457|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##NM_012367|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##BC136881|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2##BC136901|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2##NM_033057|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2##AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16##NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16##BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK309286|LOC100129195|100129195|uncharacterized LOC100129195##BC043177|LOC100129195|100129195|uncharacterized LOC100129195##AB208793|ZNF192|7745|zinc finger protein 192##BC096282|ZNF192|7745|zinc finger protein 192##BC096283|ZNF192|7745|zinc finger protein 192##BC096284|ZNF192|7745|zinc finger protein 192##BC130032|ZNF192|7745|zinc finger protein 192##NM_006298|ZNF192|7745|zinc finger protein 192##U57796|ZNF192|7745|zinc finger protein 192	0.0	
chr6	28459051	28459169	reg1032449.p1	3.841	+	AK309235 AL833347 AK092117 AX747363 NM_001012455	-47857	-	TSC_hg19_v1_chr6_-_28367519 BC041661 AB007886 NM_001163391	-91589	-	TSC_hg19_v1_chr6_+_28317723 AK091225 AX746861 NM_001242894 NM_001242895 NM_024493 AK122790 AK313532 BC006118	-141384	+	BC133691 BC148315 AY324826 NM_182701	24456	-	AJ005277 BC128159 BC128160 NM_001509 NM_003996 AB463692	34678	+	AK056369 BX647791 AY517631 NM_052923	95978	-	AK309235|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AL833347|ZSCAN23|222696|zinc finger and SCAN domain containing 23##AK092117|ZSCAN23|222696|zinc finger and SCAN domain containing 23##NM_001012455|ZSCAN23|222696|zinc finger and SCAN domain containing 23##BC041661|ZSCAN12|9753|zinc finger and SCAN domain containing 12##AB007886|ZSCAN12|9753|zinc finger and SCAN domain containing 12##NM_001163391|ZSCAN12|9753|zinc finger and SCAN domain containing 12##AK091225|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001242894|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_001242895|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##NM_024493|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##AK122790|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##AK313532|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##BC006118|ZKSCAN3|80317|zinc finger with KRAB and SCAN domains 3##BC133691|GPX6|257202|glutathione peroxidase 6 (olfactory)##BC148315|GPX6|257202|glutathione peroxidase 6 (olfactory)##AY324826|GPX6|257202|glutathione peroxidase 6 (olfactory)##NM_182701|GPX6|257202|glutathione peroxidase 6 (olfactory)##AJ005277|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC128159|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##BC128160|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##NM_001509|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##NM_003996|GPX5|2880|glutathione peroxidase 5 (epididymal androgen-related protein)##AK056369|SCAND3|114821|SCAN domain containing 3##BX647791|SCAND3|114821|SCAN domain containing 3##AY517631|SCAND3|114821|SCAN domain containing 3##NM_052923|SCAND3|114821|SCAN domain containing 3	0.0	
chr7	117633627	117633764	reg1033773.p1	3.841	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-120152	-	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	-120214	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	-513657	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	190476	+	NM_019644 AK302407	231039	+	AK307139 AB028967 NM_012281	2280009	+	BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2	0.0	
chr9	126981129	126981239	reg1036385.p2	3.841	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-207113	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-207301	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-288873	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	38826	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	39061	+	TSC_hg19_v1_chr9_+_127020255 AB026289	39080	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr9	137750049	137750229	reg1011723.p1	3.841	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	-216329	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	-216492	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-531739	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	22521	+	D83920 DQ891426 DQ894436 CR749452 BC020635 AK314867 NM_002003	59618	-	NM_014279 NM_006334 TSC_hg19_v1_chr9_+_137967133	216976	+	D90279|COL5A1|1289|collagen, type V, alpha 1##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D83920|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ891426|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##DQ894436|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##CR749452|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##BC020635|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##AK314867|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_002003|FCN1|2219|ficolin (collagen/fibrinogen domain containing) 1##NM_014279|OLFM1|10439|olfactomedin 1##NM_006334|OLFM1|10439|olfactomedin 1	0.0	
chr9	35415899	35416008	reg1034936.p1	3.841	+	TSC_hg19_v1_chr9_+_35162109 BC111781 BC111800	-253844	+	TSC_hg19_v1_chr9_+_35161986 NM_006377 AB209998 AK296836 AF020202	-253951	+	TSC_hg19_v1_chr9_-_35115860 AK022837 AK021622 BC004406 NM_025182 AK307682	-300076	-	TSC_hg19_v1_chr9_+_35489994 NM_014806	74044	+	TSC_hg19_v1_chr9_+_35490107 BC150211 AB002373 BC042915	74131	+	NM_001135999	122675	+	BC111781|UNC13B|10497|unc-13 homolog B (C. elegans)##BC111800|UNC13B|10497|unc-13 homolog B (C. elegans)##NM_006377|UNC13B|10497|unc-13 homolog B (C. elegans)##AB209998|UNC13B|10497|unc-13 homolog B (C. elegans)##AK296836|UNC13B|10497|unc-13 homolog B (C. elegans)##AF020202|UNC13B|10497|unc-13 homolog B (C. elegans)##AK022837|FAM214B|80256|family with sequence similarity 214, member B##AK021622|FAM214B|80256|family with sequence similarity 214, member B##BC004406|FAM214B|80256|family with sequence similarity 214, member B##NM_025182|FAM214B|80256|family with sequence similarity 214, member B##AK307682|FAM214B|80256|family with sequence similarity 214, member B##NM_014806|RUSC2|9853|RUN and SH3 domain containing 2##BC150211|RUSC2|9853|RUN and SH3 domain containing 2##AB002373|RUSC2|9853|RUN and SH3 domain containing 2##NM_001135999|RUSC2|9853|RUN and SH3 domain containing 2	0.988502	CTCF.p2:4:0.989
chr1	224402081	224402177	reg1038654.p2	3.840	+	TSC_hg19_v1_chr1_+_224370941 AK308232 AF466375 AY423730 AF002668 CU674476	-31142	+	TSC_hg19_v1_chr1_+_224370925 BC000961 NM_003676	-31207	+	NM_001136115 NM_015176 TSC_hg19_v1_chr1_+_224301812 AK001628 AK307892 BC031576 AK303381 CU689186	-100319	+	TSC_hg19_v1_chr1_-_224517875 BC012105 AK298244 AK297396 AK298826 AK293923 AK297070 BC005897 U78772 U68140 NM_001243146 NM_001243147 NM_002533 NM_206840	115723	-	TSC_hg19_v1_chr1_+_224544588 AL136930 AK289973 AK312064 BC039037	142440	+	TSC_hg19_v1_chr1_+_224544594 AF161512 NM_014184	142463	+	AK308232|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF466375|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AY423730|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF002668|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##BC000961|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_003676|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_001136115|FBXO28|23219|F-box protein 28##NM_015176|FBXO28|23219|F-box protein 28##AK001628|FBXO28|23219|F-box protein 28##AK307892|FBXO28|23219|F-box protein 28##BC031576|FBXO28|23219|F-box protein 28##AK303381|FBXO28|23219|F-box protein 28##BC012105|NVL|4931|nuclear VCP-like##AK298244|NVL|4931|nuclear VCP-like##AK297396|NVL|4931|nuclear VCP-like##AK298826|NVL|4931|nuclear VCP-like##AK293923|NVL|4931|nuclear VCP-like##AK297070|NVL|4931|nuclear VCP-like##BC005897|NVL|4931|nuclear VCP-like##U78772|NVL|4931|nuclear VCP-like##U68140|NVL|4931|nuclear VCP-like##NM_001243146|NVL|4931|nuclear VCP-like##NM_001243147|NVL|4931|nuclear VCP-like##NM_002533|NVL|4931|nuclear VCP-like##NM_206840|NVL|4931|nuclear VCP-like##AL136930|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK289973|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK312064|CNIH4|29097|cornichon homolog 4 (Drosophila)##BC039037|CNIH4|29097|cornichon homolog 4 (Drosophila)##AF161512|CNIH4|29097|cornichon homolog 4 (Drosophila)##NM_014184|CNIH4|29097|cornichon homolog 4 (Drosophila)	0.0	
chr14	45603881	45604028	reg1039808.p2	3.840	+	TSC_hg19_v1_chr14_-_45603685 AK311915 BC020809 M90820 AK222993 M96256 NM_002013	-248	-	AB528407 BT006904 CU677595 DQ890734 DQ891132 DQ893906 DQ894311 TSC_hg19_v1_chr14_-_45603667	-292	-	TSC_hg19_v1_chr14_+_45553323 NM_017922 AK308415 BC028683 AK307530 AK000673 BC125126 BC125127	-50645	+	TSC_hg19_v1_chr14_+_45605134 NM_020937 BC036056	1171	+	AK093422 AX748116 TSC_hg19_v1_chr14_+_45605142	1188	+	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	1235	+	AK311915|FKBP3|2287|FK506 binding protein 3, 25kDa##BC020809|FKBP3|2287|FK506 binding protein 3, 25kDa##AK222993|FKBP3|2287|FK506 binding protein 3, 25kDa##M96256|FKBP3|2287|FK506 binding protein 3, 25kDa##NM_002013|FKBP3|2287|FK506 binding protein 3, 25kDa##BT006904|FKBP3|2287|FK506 binding protein 3, 25kDa##DQ890734|FKBP3|2287|FK506 binding protein 3, 25kDa##DQ891132|FKBP3|2287|FK506 binding protein 3, 25kDa##DQ893906|FKBP3|2287|FK506 binding protein 3, 25kDa##DQ894311|FKBP3|2287|FK506 binding protein 3, 25kDa##NM_017922|PRPF39|55015|PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)##AK308415|PRPF39|55015|PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)##BC028683|PRPF39|55015|PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)##AK307530|PRPF39|55015|PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)##AK000673|PRPF39|55015|PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)##BC125126|PRPF39|55015|PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)##BC125127|PRPF39|55015|PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)##NM_020937|FANCM|57697|Fanconi anemia, complementation group M##BC036056|FANCM|57697|Fanconi anemia, complementation group M##AK093422|FANCM|57697|Fanconi anemia, complementation group M##DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M	0.020334	
chr15	94773018	94773145	reg1035624.p2	3.840	+	AB463222 AM392685 BC146682 AK074980 BC140838 BC151132 AL136826 TSC_hg19_v1_chr15_-_93632430 AK074910 AK291365 NM_020211	-1140728	-	NM_001166287	-1141330	-	AK299363 NM_001166283	-1155928	-	TSC_hg19_v1_chr15_+_94774789 AK300325 AL832717 AL832048 AK090622 AX746539 BC041387	1777	+	NM_001159643 NM_018349 AY656717 BC131527	68380	+	NM_001159644 BC025708 BC111024 AK002037	126228	+	AM392685|RGMA|56963|RGM domain family, member A##BC146682|RGMA|56963|RGM domain family, member A##AK074980|RGMA|56963|RGM domain family, member A##BC140838|RGMA|56963|RGM domain family, member A##BC151132|RGMA|56963|RGM domain family, member A##AL136826|RGMA|56963|RGM domain family, member A##AK074910|RGMA|56963|RGM domain family, member A##NM_020211|RGMA|56963|RGM domain family, member A##NM_001166287|RGMA|56963|RGM domain family, member A##AK299363|RGMA|56963|RGM domain family, member A##NM_001166283|RGMA|56963|RGM domain family, member A##AK300325|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832717|MCTP2|55784|multiple C2 domains, transmembrane 2##AL832048|MCTP2|55784|multiple C2 domains, transmembrane 2##AK090622|MCTP2|55784|multiple C2 domains, transmembrane 2##BC041387|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2	0.0	
chr16	85953514	85953660	reg1031832.p2	3.840	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-20801	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-120252	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-120282	+	TSC_hg19_v1_chr16_-_86542463 AK091834	588877	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	590569	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	590653	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.0	
chr19	28707858	28707942	reg1019097.p1	3.840	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-422972	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-423067	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-423512	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	996160	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	996221	-	NM_001146339	1309590	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.0	
chr19	3275451	3275626	reg1033455.p1	3.840	+	BC047522 DQ891648 DQ894837 TSC_hg19_v1_chr19_+_3224751 CU690430 AF329266	-50795	+	BC028101 NM_021938 AB209067 NM_001172673 TSC_hg19_v1_chr19_+_3224705	-50834	+	TSC_hg19_v1_chr19_+_3198814 BC008920	-76713	+	TSC_hg19_v1_chr19_+_3359531 NM_001245005 NM_205843 X12492 AK304816 AK289885	83918	+	TSC_hg19_v1_chr19_+_3366562 NM_001245002 NM_001245004 NM_005597 BC012120	91017	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	91042	+	BC047522|CELF5|60680|CUGBP, Elav-like family member 5##DQ891648|CELF5|60680|CUGBP, Elav-like family member 5##DQ894837|CELF5|60680|CUGBP, Elav-like family member 5##AF329266|CELF5|60680|CUGBP, Elav-like family member 5##BC028101|CELF5|60680|CUGBP, Elav-like family member 5##NM_021938|CELF5|60680|CUGBP, Elav-like family member 5##AB209067|CELF5|60680|CUGBP, Elav-like family member 5##NM_001172673|CELF5|60680|CUGBP, Elav-like family member 5##BC008920|NCLN|56926|nicalin##NM_001245005|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_205843|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X12492|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK304816|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK289885|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245002|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245004|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_005597|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC012120|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)	0.164126	
chr2	206188834	206188919	reg1040409.p2	3.840	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-778157	+	TSC_hg19_v1_chr2_+_205410560 AX765687 AX765741 AK056157	-778282	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	-778386	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	358302	+	TSC_hg19_v1_chr2_+_206547371 AK290934	358485	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	762035	-	AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK056157|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AK290934|NRP2|8828|neuropilin 2##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D	0.056081	
chr22	24272374	24272486	reg1038369.p2	3.840	+	TSC_hg19_v1_chr22_+_24236595 BC007676 BC008914 M25639 BC053376 BC051440 CR456520 CU013120 CU013408 DQ892195 DQ895390 AB463103 AF469046 BT007148 CR407644 CR541651 Z23063 EF492869 M95775	-35789	+	L10612 TSC_hg19_v1_chr22_+_24236591	-35841	+	BC007376 TSC_hg19_v1_chr22_+_24236579 BC000447	-35850	+	CR456929 L38503 CU013079 CU013097 CU013367 CU013385 DQ890742 AB528145 CR456500 BC071700 CR456374 BC146929 BC146936 NM_001080843 BC002415 AK312043 NM_000854 BC146940 BC146943	30957	-	NM_001084393 AK296110 AK296189 AK298326	36624	+	BT006970 CU012991 CU013279 DQ891571 DQ894765 U84143 AK298326 AK292044 CR456431 BC005971 AK296189 AK304122 AK315943 BC015508 NM_001084392	44210	-	BC007676|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC008914|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##M25639|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC053376|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC051440|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CR456520|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CU013120|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CU013408|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##DQ892195|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##DQ895390|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##AF469046|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BT007148|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CR407644|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CR541651|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##Z23063|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##M95775|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##L10612|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC007376|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##BC000447|MIF|4282|macrophage migration inhibitory factor (glycosylation-inhibiting factor)##CR456929|GSTT2|2953|glutathione S-transferase theta 2##L38503|GSTT2|2953|glutathione S-transferase theta 2##CU013079|GSTT2|2953|glutathione S-transferase theta 2##CU013097|GSTT2|2953|glutathione S-transferase theta 2##CU013367|GSTT2|2953|glutathione S-transferase theta 2##CU013385|GSTT2|2953|glutathione S-transferase theta 2##DQ890742|GSTT2|2953|glutathione S-transferase theta 2##CR456500|GSTT2|2953|glutathione S-transferase theta 2##BC071700|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##CR456374|GSTT2|2953|glutathione S-transferase theta 2##BC146929|GSTT2|2953|glutathione S-transferase theta 2##BC146936|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##NM_001080843|GSTT2B|653689|glutathione S-transferase theta 2B (gene/pseudogene)##BC002415|GSTT2|2953|glutathione S-transferase theta 2##AK312043|GSTT2|2953|glutathione S-transferase theta 2##NM_000854|GSTT2|2953|glutathione S-transferase theta 2##BC146940|GSTT2|2953|glutathione S-transferase theta 2##BC146943|GSTT2|2953|glutathione S-transferase theta 2##NM_001084393|DDTL|100037417|D-dopachrome tautomerase-like##AK296110|DDTL|100037417|D-dopachrome tautomerase-like##BT006970|DDT|1652|D-dopachrome tautomerase##CU012991|DDT|1652|D-dopachrome tautomerase##CU013279|DDT|1652|D-dopachrome tautomerase##DQ891571|DDT|1652|D-dopachrome tautomerase##DQ894765|DDT|1652|D-dopachrome tautomerase##U84143|DDT|1652|D-dopachrome tautomerase##AK292044|DDT|1652|D-dopachrome tautomerase##CR456431|DDT|1652|D-dopachrome tautomerase##BC005971|DDT|1652|D-dopachrome tautomerase##BC015508|DDT|1652|D-dopachrome tautomerase##NM_001084392|DDT|1652|D-dopachrome tautomerase	0.830069	CTCF.p2:-32:0.830
chr2	64371457	64371538	reg1032340.p1	3.840	+	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	-124992	-	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	-125235	-	BX647825 NM_006759 AK314263 TSC_hg19_v1_chr2_+_64069029 BC047004 BC000173	-302471	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	27	-	TSC_hg19_v1_chr2_+_64681295 NM_014181	309803	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	310151	+	AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BX647825|UGP2|7360|UDP-glucose pyrophosphorylase 2##NM_006759|UGP2|7360|UDP-glucose pyrophosphorylase 2##AK314263|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC047004|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC000173|UGP2|7360|UDP-glucose pyrophosphorylase 2##BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like	0.011512	
chr3	112627229	112627354	reg1035248.p2	3.840	+	BC144504 BC144507 AY284976 AY552790 NM_001008784 NM_001199215	-62499	-	AY548106 AY548107 TSC_hg19_v1_chr3_-_112359991 BC110842 AY526612 NM_199511 NM_199512 AK304561	-267314	-	BX647117 TSC_hg19_v1_chr3_-_112359888 BC116178 BC116179 AY333429 AF506819	-267408	-	AF283760 BC069661 BC069721 BC069743 AF495380 AF497548 AF497549 AF497550 BC093890 BC143393 AK304426 AK293071 AY284975 AK126349 NM_138806 NM_138939 NM_138940 NM_170780 AY358910	66544	-	TSC_hg19_v1_chr3_+_112709777 AK292651	82487	+	NM_014170 NM_138485 BC037163 TSC_hg19_v1_chr3_+_112709842 BC000003 AF161484 BC010137 AK289611 CU691454 DQ892307 DQ895506	82531	+	BC144504|CD200R1L|344807|CD200 receptor 1-like##BC144507|CD200R1L|344807|CD200 receptor 1-like##AY284976|CD200R1L|344807|CD200 receptor 1-like##AY552790|CD200R1L|344807|CD200 receptor 1-like##NM_001008784|CD200R1L|344807|CD200 receptor 1-like##NM_001199215|CD200R1L|344807|CD200 receptor 1-like##AY548106|CCDC80|151887|coiled-coil domain containing 80##AY548107|CCDC80|151887|coiled-coil domain containing 80##BC110842|CCDC80|151887|coiled-coil domain containing 80##AY526612|CCDC80|151887|coiled-coil domain containing 80##NM_199511|CCDC80|151887|coiled-coil domain containing 80##NM_199512|CCDC80|151887|coiled-coil domain containing 80##AK304561|CCDC80|151887|coiled-coil domain containing 80##BX647117|CCDC80|151887|coiled-coil domain containing 80##BC116178|CCDC80|151887|coiled-coil domain containing 80##BC116179|CCDC80|151887|coiled-coil domain containing 80##AY333429|CCDC80|151887|coiled-coil domain containing 80##AF506819|CCDC80|151887|coiled-coil domain containing 80##AF283760|CD200R1|131450|CD200 receptor 1##BC069661|CD200R1|131450|CD200 receptor 1##BC069721|CD200R1|131450|CD200 receptor 1##BC069743|CD200R1|131450|CD200 receptor 1##AF495380|CD200R1|131450|CD200 receptor 1##AF497548|CD200R1|131450|CD200 receptor 1##AF497549|CD200R1|131450|CD200 receptor 1##AF497550|CD200R1|131450|CD200 receptor 1##BC093890|CD200R1|131450|CD200 receptor 1##BC143393|CD200R1|131450|CD200 receptor 1##AK304426|CD200R1|131450|CD200 receptor 1##AK293071|CD200R1|131450|CD200 receptor 1##AY284975|CD200R1|131450|CD200 receptor 1##AK126349|CD200R1|131450|CD200 receptor 1##NM_138806|CD200R1|131450|CD200 receptor 1##NM_138939|CD200R1|131450|CD200 receptor 1##NM_138940|CD200R1|131450|CD200 receptor 1##NM_170780|CD200R1|131450|CD200 receptor 1##AY358910|CD200R1|131450|CD200 receptor 1##AK292651|GTPBP8|29083|GTP-binding protein 8 (putative)##NM_014170|GTPBP8|29083|GTP-binding protein 8 (putative)##NM_138485|GTPBP8|29083|GTP-binding protein 8 (putative)##BC037163|GTPBP8|29083|GTP-binding protein 8 (putative)##BC000003|GTPBP8|29083|GTP-binding protein 8 (putative)##AF161484|GTPBP8|29083|GTP-binding protein 8 (putative)##BC010137|GTPBP8|29083|GTP-binding protein 8 (putative)##AK289611|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ892307|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ895506|GTPBP8|29083|GTP-binding protein 8 (putative)	0.0	
chr3	190013675	190013749	reg1029279.p2	3.840	+	NM_001134418	-173487	-	NM_018192	-174805	-	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	-175017	-	BC012471 AF114837 AY358652 AF101051 AF134160 AK312866 AK225963 AK296934 TSC_hg19_v1_chr3_-_190040231 NM_021101	26502	-	AK314955 NM_006580	91948	+	CU687168 BC071780 AY358607 NM_207316	153918	-	NM_001134418|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##BC012471|CLDN1|9076|claudin 1##AF114837|CLDN1|9076|claudin 1##AY358652|CLDN1|9076|claudin 1##AF101051|CLDN1|9076|claudin 1##AF134160|CLDN1|9076|claudin 1##AK312866|CLDN1|9076|claudin 1##AK296934|CLDN1|9076|claudin 1##NM_021101|CLDN1|9076|claudin 1##AK314955|CLDN16|10686|claudin 16##NM_006580|CLDN16|10686|claudin 16##BC071780|TMEM207|131920|transmembrane protein 207##AY358607|TMEM207|131920|transmembrane protein 207##NM_207316|TMEM207|131920|transmembrane protein 207	0.0	
chr4	30716203	30716303	reg1032362.p1	3.840	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-3853713	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-4130573	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-4224268	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	5746	+	AB006757 TSC_hg19_v1_chr4_+_30722198	5941	+	TSC_hg19_v1_chr4_+_30722465 AB006756	6206	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.177981	
chr5	9544490	9544629	reg1005906.p1	3.840	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-1675249	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-1675300	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-1675427	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	1635	-	BC095521 NM_019599	85903	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	705425	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.0	
chr6	26258621	26258760	reg1031655.p1	3.840	+	TSC_hg19_v1_chr6_+_26251841 AK310576 AK312052 BC096116 BC096117 BC096118 BC096119 NM_003524	-6838	+	BC067492 BC096131 CR541983 CR542011 HQ257959 BC069818 NM_021018 TSC_hg19_v1_chr6_-_26250864 AK314142	-7840	-	NM_003547 HQ258035 BC126276 BC126278	-11459	-	TSC_hg19_v1_chr6_-_26271642 AB591037 EU446974 NM_003534 BC079835	12927	-	BC101653 BC101655 EU446969 NM_003525	14483	+	BC120939 CR542169 CR542187 NM_003543 DQ892790 DQ896037 BC010926 TSC_hg19_v1_chr6_-_26285763	27055	-	AK312052|HIST1H2BH|8345|histone cluster 1, H2bh##BC096116|HIST1H2BH|8345|histone cluster 1, H2bh##BC096117|HIST1H2BH|8345|histone cluster 1, H2bh##BC096118|HIST1H2BH|8345|histone cluster 1, H2bh##BC096119|HIST1H2BH|8345|histone cluster 1, H2bh##NM_003524|HIST1H2BH|8345|histone cluster 1, H2bh##BC067492|HIST1H3F|8968|histone cluster 1, H3f##BC096131|HIST1H3F|8968|histone cluster 1, H3f##CR541983|HIST1H3F|8968|histone cluster 1, H3f##CR542011|HIST1H3F|8968|histone cluster 1, H3f##HQ257959|HIST1H3J|8356|histone cluster 1, H3j##BC069818|HIST1H3F|8968|histone cluster 1, H3f##NM_021018|HIST1H3F|8968|histone cluster 1, H3f##AK314142|HIST1H3F|8968|histone cluster 1, H3f##NM_003547|HIST1H4G|8369|histone cluster 1, H4g##HQ258035|HIST1H4G|8369|histone cluster 1, H4g##BC126276|HIST1H4G|8369|histone cluster 1, H4g##BC126278|HIST1H4G|8369|histone cluster 1, H4g##EU446974|HIST1H3G|8355|histone cluster 1, H3g##NM_003534|HIST1H3G|8355|histone cluster 1, H3g##BC079835|HIST1H3G|8355|histone cluster 1, H3g##BC101653|HIST1H2BI|8346|histone cluster 1, H2bi##BC101655|HIST1H2BI|8346|histone cluster 1, H2bi##EU446969|HIST1H2BI|8346|histone cluster 1, H2bi##NM_003525|HIST1H2BI|8346|histone cluster 1, H2bi##BC120939|HIST1H4H|8365|histone cluster 1, H4h##CR542169|HIST1H4H|8365|histone cluster 1, H4h##CR542187|HIST1H4H|8365|histone cluster 1, H4h##NM_003543|HIST1H4H|8365|histone cluster 1, H4h##DQ892790|HIST1H4H|8365|histone cluster 1, H4h##DQ896037|HIST1H4H|8365|histone cluster 1, H4h##BC010926|HIST1H4H|8365|histone cluster 1, H4h	0.963127	CTCF.p2:3:0.963
chrX	118770411	118770591	reg1028635.p1	3.840	+	BC047878 BC068514 BC040379 AY208891 NM_001173487 NM_017544	-30673	-	EF165090 EF165091 EF165093 AJ011812 EF158333 EF216688 EF216689 NM_001173488	-43519	-	BC042021 NM_181777	-56204	+	D50918 AB384441 CU679289 CU680116 CU690318 TSC_hg19_v1_chrX_-_118827108 BC069231	56584	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	56631	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	56678	-	BC047878|NKRF|55922|NFKB repressing factor##BC068514|NKRF|55922|NFKB repressing factor##BC040379|NKRF|55922|NFKB repressing factor##AY208891|NKRF|55922|NFKB repressing factor##NM_001173487|NKRF|55922|NFKB repressing factor##NM_017544|NKRF|55922|NFKB repressing factor##EF165090|NKRF|55922|NFKB repressing factor##EF165091|NKRF|55922|NFKB repressing factor##EF165093|NKRF|55922|NFKB repressing factor##AJ011812|NKRF|55922|NFKB repressing factor##EF158333|NKRF|55922|NFKB repressing factor##EF216688|NKRF|55922|NFKB repressing factor##EF216689|NKRF|55922|NFKB repressing factor##NM_001173488|NKRF|55922|NFKB repressing factor##BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D50918|SEPT6|23157|septin 6##BC069231|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6	0.0	
chrX	47064492	47064576	reg1037652.p1	3.840	+	TSC_hg19_v1_chrX_+_47053335 X56976	-11188	+	TSC_hg19_v1_chrX_+_47053278 M58028	-11251	+	TSC_hg19_v1_chrX_+_47053240 BC009900	-11284	+	TSC_hg19_v1_chrX_+_47077614 NM_033018 BC001048 BC015607	13075	+	TSC_hg19_v1_chrX_+_47078108 NM_006201 AK096881 AK303849 BC006190 AK290145	13573	+	TSC_hg19_v1_chrX_+_47078171 AK296880	13683	+	X56976|UBA1|7317|ubiquitin-like modifier activating enzyme 1##M58028|UBA1|7317|ubiquitin-like modifier activating enzyme 1##BC009900|UBA1|7317|ubiquitin-like modifier activating enzyme 1##NM_033018|CDK16|5127|cyclin-dependent kinase 16##BC001048|CDK16|5127|cyclin-dependent kinase 16##BC015607|CDK16|5127|cyclin-dependent kinase 16##NM_006201|CDK16|5127|cyclin-dependent kinase 16##AK096881|CDK16|5127|cyclin-dependent kinase 16##AK303849|CDK16|5127|cyclin-dependent kinase 16##BC006190|CDK16|5127|cyclin-dependent kinase 16##AK290145|CDK16|5127|cyclin-dependent kinase 16##AK296880|CDK16|5127|cyclin-dependent kinase 16	0.972103	CTCF.p2:7:0.972
chr12	21760760	21760886	reg1029697.p1	3.839	+	AK308373 D29685 NM_021957	-3057	-	TSC_hg19_v1_chr12_+_21679232 AK075342 BC004336 NM_030572 AK027273	-81552	+	TSC_hg19_v1_chr12_+_21654752 AB097020 AK310889 AF151899 BC012455 AY358975 AK311920 AL136571 CU680332 CR457389	-106022	+	BC071860 NM_001174097 Y00711 TSC_hg19_v1_chr12_-_21810732	49903	-	TSC_hg19_v1_chr12_-_21810735 AK129881	49919	-	TSC_hg19_v1_chr12_-_21810756 BC002362 AY189689	49937	-	AK308373|GYS2|2998|glycogen synthase 2 (liver)##D29685|GYS2|2998|glycogen synthase 2 (liver)##NM_021957|GYS2|2998|glycogen synthase 2 (liver)##AK075342|C12orf39|80763|chromosome 12 open reading frame 39##BC004336|C12orf39|80763|chromosome 12 open reading frame 39##NM_030572|C12orf39|80763|chromosome 12 open reading frame 39##AK027273|C12orf39|80763|chromosome 12 open reading frame 39##AB097020|GOLT1B|51026|golgi transport 1B##AK310889|GOLT1B|51026|golgi transport 1B##AF151899|GOLT1B|51026|golgi transport 1B##BC012455|GOLT1B|51026|golgi transport 1B##AY358975|GOLT1B|51026|golgi transport 1B##AK311920|GOLT1B|51026|golgi transport 1B##AL136571|GOLT1B|51026|golgi transport 1B##CR457389|GOLT1B|51026|golgi transport 1B##BC071860|LDHB|3945|lactate dehydrogenase B##NM_001174097|LDHB|3945|lactate dehydrogenase B##Y00711|LDHB|3945|lactate dehydrogenase B##AK129881|LDHB|3945|lactate dehydrogenase B##BC002362|LDHB|3945|lactate dehydrogenase B##AY189689|LDHB|3945|lactate dehydrogenase B	0.941277	CTCF.p2:-4:0.941
chr1	6474501	6474636	reg1030550.p1	3.839	+	BC017365 AK057168 NM_007274	-20769	-	BT006888 TSC_hg19_v1_chr1_-_6453439 AB074415 AB074416 D88894 AK289572 AK300831	-21157	-	AK290097 AB074417 NM_181864	-28759	-	AB463714 BC132698 BC136963 BC142687 TSC_hg19_v1_chr1_-_6479976 AK091122 NM_019089	5362	-	TSC_hg19_v1_chr1_+_6484835 AL136880 NM_031475	10263	+	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	51634	-	BC017365|ACOT7|11332|acyl-CoA thioesterase 7##AK057168|ACOT7|11332|acyl-CoA thioesterase 7##NM_007274|ACOT7|11332|acyl-CoA thioesterase 7##BT006888|ACOT7|11332|acyl-CoA thioesterase 7##AB074415|ACOT7|11332|acyl-CoA thioesterase 7##AB074416|ACOT7|11332|acyl-CoA thioesterase 7##D88894|ACOT7|11332|acyl-CoA thioesterase 7##AK289572|ACOT7|11332|acyl-CoA thioesterase 7##AK300831|ACOT7|11332|acyl-CoA thioesterase 7##AK290097|ACOT7|11332|acyl-CoA thioesterase 7##AB074417|ACOT7|11332|acyl-CoA thioesterase 7##NM_181864|ACOT7|11332|acyl-CoA thioesterase 7##BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)##NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AL136880|ESPN|83715|espin##NM_031475|ESPN|83715|espin##U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25	0.088905	
chr20	34067036	34067129	reg1036315.p2	3.839	+	TSC_hg19_v1_chr20_+_34042987 AK307861 AB621828 AF049105 NM_007186	-24008	+	AB593125 U13660 NM_000557	-41092	-	TSC_hg19_v1_chr20_-_33999791 AK225281 AK293149 BC119013 BC122862 AY050659 NM_001184977 NM_018244 NM_199487	-67220	-	AK058089 AK310337 NM_001145350	50381	-	NM_015966 NM_198398 TSC_hg19_v1_chr20_+_34129827 AF308298 AF077030 AF151812 EF206690 BC014014	62720	+	AK074550 BC009765 TSC_hg19_v1_chr20_+_34129829 AK096484 AK300916	62748	+	AK307861|CEP250|11190|centrosomal protein 250kDa##AF049105|CEP250|11190|centrosomal protein 250kDa##NM_007186|CEP250|11190|centrosomal protein 250kDa##AB593125|GDF5|8200|growth differentiation factor 5##U13660|GDF5|8200|growth differentiation factor 5##NM_000557|GDF5|8200|growth differentiation factor 5##AK225281|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK293149|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC119013|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##BC122862|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AY050659|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_001184977|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_018244|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##NM_199487|UQCC|55245|ubiquinol-cytochrome c reductase complex chaperone##AK058089|C20orf173|140873|chromosome 20 open reading frame 173##AK310337|C20orf173|140873|chromosome 20 open reading frame 173##NM_001145350|C20orf173|140873|chromosome 20 open reading frame 173##NM_015966|ERGIC3|51614|ERGIC and golgi 3##NM_198398|ERGIC3|51614|ERGIC and golgi 3##AF308298|ERGIC3|51614|ERGIC and golgi 3##AF077030|ERGIC3|51614|ERGIC and golgi 3##AF151812|ERGIC3|51614|ERGIC and golgi 3##EF206690|ERGIC3|51614|ERGIC and golgi 3##BC014014|ERGIC3|51614|ERGIC and golgi 3##AK074550|ERGIC3|51614|ERGIC and golgi 3##BC009765|ERGIC3|51614|ERGIC and golgi 3##AK096484|ERGIC3|51614|ERGIC and golgi 3##AK300916|ERGIC3|51614|ERGIC and golgi 3	0.975994	CTCF.p2:-12:0.962
chr8	102715300	102715431	reg1036000.p1	3.839	+	TSC_hg19_v1_chr8_+_102504840 AK023844 AK292853 BC069618 BC069633 BC069638 BC129822 BC129823	-210455	+	TSC_hg19_v1_chr8_+_102504667 NM_024915 AK296817 AK310221	-210700	+	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	-497411	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	87818	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	87835	-	NM_032041	88073	-	AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##NM_032041|NCALD|83988|neurocalcin delta	0.0	
chr11	35104115	35104294	reg1034081.p1	3.838	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-166047	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-166315	-	NM_001135024 NM_001166158 NM_003477	-166528	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	56196	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	56530	+	TSC_hg19_v1_chr11_+_35160821 M59040	56614	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr12	44394250	44394386	reg1032510.p1	3.838	+	TSC_hg19_v1_chr12_+_44229883 BC042192 BC060798 AK057287 BC030284 AL136855 NM_032256	-164412	+	AK127868 BT019691 CR541736 CR541761 AB209302 AB384914 TSC_hg19_v1_chr12_-_44200120 AK291223 BC022491 BC022344 U02680 BC068548 EU832120 EU832214 AK297206 BC043148 NM_001242397 NM_002822	-194206	-	TSC_hg19_v1_chr12_+_44152777 BC013316 AY340962 AY340963 AY340964 AY340965 AY340966 AY340967 AF155118 AK000528	-241539	+	D89629 AK315960 AK299277 NM_001145109	875073	-	BC020544 TSC_hg19_v1_chr12_-_45269991	875659	-	TSC_hg19_v1_chr12_-_45270099 AK056082 AK297521 AK309825 D83018	875787	-	BC042192|TMEM117|84216|transmembrane protein 117##BC060798|TMEM117|84216|transmembrane protein 117##AK057287|TMEM117|84216|transmembrane protein 117##BC030284|TMEM117|84216|transmembrane protein 117##AL136855|TMEM117|84216|transmembrane protein 117##NM_032256|TMEM117|84216|transmembrane protein 117##AK127868|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BT019691|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541736|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##CR541761|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AB209302|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK291223|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022491|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC022344|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##U02680|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC068548|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832120|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##EU832214|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##AK297206|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC043148|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_001242397|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##NM_002822|TWF1|5756|twinfilin, actin-binding protein, homolog 1 (Drosophila)##BC013316|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340962|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340963|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340964|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340965|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340966|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AY340967|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AF155118|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK000528|IRAK4|51135|interleukin-1 receptor-associated kinase 4##D89629|NELL2|4753|NEL-like 2 (chicken)##AK315960|NELL2|4753|NEL-like 2 (chicken)##AK299277|NELL2|4753|NEL-like 2 (chicken)##NM_001145109|NELL2|4753|NEL-like 2 (chicken)##BC020544|NELL2|4753|NEL-like 2 (chicken)##AK056082|NELL2|4753|NEL-like 2 (chicken)##AK297521|NELL2|4753|NEL-like 2 (chicken)##AK309825|NELL2|4753|NEL-like 2 (chicken)##D83018|NELL2|4753|NEL-like 2 (chicken)	0.917826	CTCF.p2:29:0.918
chr13	74862626	74862705	reg1035534.p2	3.838	+	TSC_hg19_v1_chr13_-_74708425 AK291397	-154269	-	AF161471 AF113122 NM_007249	-154676	-	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-1229461	+	CR749622 TSC_hg19_v1_chr13_-_75901948	1039257	-	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	1193673	-	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	1249313	-	AK291397|KLF12|11278|Kruppel-like factor 12##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##CR749622|TBC1D4|9882|TBC1 domain family, member 4##AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6	0.0	
chr17	27921270	27921382	reg1035386.p1	3.838	+	TSC_hg19_v1_chr17_+_27920483 NM_152345	-824	+	TSC_hg19_v1_chr17_-_27916646 AK294785 BC048196	-4671	-	TSC_hg19_v1_chr17_-_27916606 BC067358 NM_001085454 NM_014030	-4720	-	AK096431 NM_032854	27066	-	BC028205 TSC_hg19_v1_chr17_-_27949878 AL833952	28525	-	TSC_hg19_v1_chr17_-_28088446 BC011636	167132	-	NM_152345|ANKRD13B|124930|ankyrin repeat domain 13B##AK294785|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC048196|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##BC067358|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_001085454|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##NM_014030|GIT1|28964|G protein-coupled receptor kinase interacting ArfGAP 1##AK096431|CORO6|84940|coronin 6##NM_032854|CORO6|84940|coronin 6##BC028205|CORO6|84940|coronin 6##AL833952|CORO6|84940|coronin 6##BC011636|SSH2|85464|slingshot homolog 2 (Drosophila)	0.655593	CTCF.p2:35:0.656
chr18	32707319	32707399	reg1032933.p2	3.838	+	TSC_hg19_v1_chr18_+_32621374 NM_014268 AK090945 AX746696 AK315766 BC007318 AB016823 AB528177 AM393705 BT020086 CR536545 CU675609 DQ892923 DQ896172 AK296251	-85903	+	NM_001143827 AK294833 TSC_hg19_v1_chr18_+_32558384	-149059	+	NM_001143826 TSC_hg19_v1_chr18_+_32557008	-150400	+	TSC_hg19_v1_chr18_+_32821018 NM_001135178 NM_032347 AF533250 AY157641 AK311533 AK027384 BC006172	113687	+	TSC_hg19_v1_chr18_-_32870201 AX721137 AK131291 AK128697 AY234408 AK303447 NM_001112734 NM_001166012	162813	-	TSC_hg19_v1_chr18_+_32870279 AK023456 AF159567 AK094216	162945	+	NM_014268|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK090945|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK315766|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##BC007318|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AB016823|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AM393705|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##BT020086|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##CR536545|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##DQ892923|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##DQ896172|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK296251|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001143827|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##AK294833|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001143826|MAPRE2|10982|microtubule-associated protein, RP/EB family, member 2##NM_001135178|ZNF397|84307|zinc finger protein 397##NM_032347|ZNF397|84307|zinc finger protein 397##AF533250|ZNF397|84307|zinc finger protein 397##AY157641|ZNF397|84307|zinc finger protein 397##AK311533|ZNF397|84307|zinc finger protein 397##AK027384|ZNF397|84307|zinc finger protein 397##BC006172|ZNF397|84307|zinc finger protein 397##AK131291|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK128697|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AY234408|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK303447|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##NM_001112734|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##NM_001166012|ZSCAN30|100101467|zinc finger and SCAN domain containing 30##AK023456|ZNF271|10778|zinc finger protein 271##AF159567|ZNF271|10778|zinc finger protein 271##AK094216|ZNF271|10778|zinc finger protein 271	0.604738	CTCF.p2:13:0.605
chr20	44518819	44518932	reg1038726.p1	3.838	+	AK172808 TSC_hg19_v1_chr20_+_44518912	-28	+	BC039607 NM_080608	-2638	-	NM_080603 TSC_hg19_v1_chr20_+_44509872 AK291304 AK026450 BC001672 BC080525	-9012	+	NM_000308 NM_001127695 NM_001167594	715	+	AB587593 AJ295985 TSC_hg19_v1_chr20_-_44519848 BC074737 BC105935 BC107485 NM_080749 AK054821	931	-	TSC_hg19_v1_chr20_+_44519953 AK304536 AB209705	1068	+	AK172808|CTSA|5476|cathepsin A##BC039607|SPATA25|128497|spermatogenesis associated 25##NM_080608|SPATA25|128497|spermatogenesis associated 25##NM_080603|ZSWIM1|90204|zinc finger, SWIM-type containing 1##AK291304|ZSWIM1|90204|zinc finger, SWIM-type containing 1##BC001672|ZSWIM1|90204|zinc finger, SWIM-type containing 1##BC080525|ZSWIM1|90204|zinc finger, SWIM-type containing 1##NM_000308|CTSA|5476|cathepsin A##NM_001127695|CTSA|5476|cathepsin A##NM_001167594|CTSA|5476|cathepsin A##AJ295985|NEURL2|140825|neuralized homolog 2 (Drosophila)##BC074737|NEURL2|140825|neuralized homolog 2 (Drosophila)##BC105935|NEURL2|140825|neuralized homolog 2 (Drosophila)##BC107485|NEURL2|140825|neuralized homolog 2 (Drosophila)##NM_080749|NEURL2|140825|neuralized homolog 2 (Drosophila)##AK054821|NEURL2|140825|neuralized homolog 2 (Drosophila)##AK304536|CTSA|5476|cathepsin A##AB209705|CTSA|5476|cathepsin A	0.398293	CTCF.p2:-11:0.398
chr5	124080382	124080562	reg1036280.p2	3.838	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1232590	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1321328	-	NM_001136239 AK297992 AF272898 AF272899	-1655628	+	BC131507 AB033107 BC151226 NM_020747	316	-	NM_001146319 AK316288 AK300154	1615342	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1678371	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.0	
chr5	158324596	158324742	reg1023097.p1	3.838	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1038579	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-1140289	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-1153929	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	201788	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	202073	-	AK304228 NM_001199382	309979	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.0	
chr6	132991089	132991182	reg1010811.p2	3.838	+	AY180374 NM_138327 BC101825 BC112194	-23982	-	AY703480 NM_001033080 AB464299	-45721	-	AY702304 BC067461 BC067462 BC067463 NM_014626	-51916	-	U39664 BC096268 AJ132099 BC096265 BC096266 BC096267 TSC_hg19_v1_chr6_-_133035195 AK290425 AK314265 NM_004666	44053	-	BC064641 AB435062 AB435063 AB435064 AB435065 NM_001242350 HQ258282 HQ258449 AB026705 AJ132100 D89974 NM_004665 AK290908 AK298719 BC126145 BC126147 BC144064	87866	-	AK292125 NM_078488 TSC_hg19_v1_chr6_-_133084603	93460	-	AY180374|TAAR1|134864|trace amine associated receptor 1##NM_138327|TAAR1|134864|trace amine associated receptor 1##BC101825|TAAR1|134864|trace amine associated receptor 1##BC112194|TAAR1|134864|trace amine associated receptor 1##AY703480|TAAR2|9287|trace amine associated receptor 2##NM_001033080|TAAR2|9287|trace amine associated receptor 2##AY702304|TAAR2|9287|trace amine associated receptor 2##BC067461|TAAR2|9287|trace amine associated receptor 2##BC067462|TAAR2|9287|trace amine associated receptor 2##BC067463|TAAR2|9287|trace amine associated receptor 2##NM_014626|TAAR2|9287|trace amine associated receptor 2##U39664|VNN1|8876|vanin 1##BC096268|VNN1|8876|vanin 1##AJ132099|VNN1|8876|vanin 1##BC096265|VNN1|8876|vanin 1##BC096266|VNN1|8876|vanin 1##BC096267|VNN1|8876|vanin 1##AK290425|VNN1|8876|vanin 1##AK314265|VNN1|8876|vanin 1##NM_004666|VNN1|8876|vanin 1##BC064641|VNN2|8875|vanin 2##AB435062|VNN2|8875|vanin 2##AB435063|VNN2|8875|vanin 2##AB435064|VNN2|8875|vanin 2##AB435065|VNN2|8875|vanin 2##NM_001242350|VNN2|8875|vanin 2##HQ258282|VNN2|8875|vanin 2##HQ258449|VNN2|8875|vanin 2##AB026705|VNN2|8875|vanin 2##AJ132100|VNN2|8875|vanin 2##D89974|VNN2|8875|vanin 2##NM_004665|VNN2|8875|vanin 2##AK290908|VNN2|8875|vanin 2##AK298719|VNN2|8875|vanin 2##BC126145|VNN2|8875|vanin 2##BC126147|VNN2|8875|vanin 2##BC144064|VNN2|8875|vanin 2##AK292125|VNN2|8875|vanin 2##NM_078488|VNN2|8875|vanin 2	0.0	
chr7	41855878	41856059	reg1036061.p2	3.838	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-113283	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1681359	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1681437	+	NM_000168	420649	-	TSC_hg19_v1_chr7_-_42276797 AK308429	420827	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	1095621	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.0	
chr8	37125163	37125254	reg1031241.p2	3.838	+	NM_001031836 AK302391 BC028701	-483338	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-2032221	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-3667713	-	TSC_hg19_v1_chr8_-_37457377 AK025743	332160	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	428109	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	468898	+	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2	0.0	
chr11	35057758	35057891	reg1030385.p2	3.837	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-119667	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-119935	-	NM_001135024 NM_001166158 NM_003477	-120148	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	102576	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	102910	+	TSC_hg19_v1_chr11_+_35160821 M59040	102994	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr11	35187298	35187413	reg1023087.p1	3.837	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-26495	+	TSC_hg19_v1_chr11_+_35160821 M59040	-26537	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	-26621	+	TSC_hg19_v1_chr11_+_35198199 AK129808	10857	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	91470	-	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	253356	-	AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##AK129808|CD44|960|CD44 molecule (Indian blood group)##CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.0	
chr12	92896360	92896452	reg1027885.p1	3.837	+	AJ845168 NM_001025232	-74483	-	AJ845165 AJ845166 NM_001025233	-78672	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-356763	-	NM_001037671 NM_001178097	200212	+	NM_001004330 AK128530	233881	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	426532	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr14	52314079	52314175	reg1033073.p2	3.837	+	TSC_hg19_v1_chr14_+_52118627 BX161430 NM_152330 BC020521 AK315764 AK055545 BX647863	-195497	+	AL833158 NM_001042481	-358273	+	NM_030755 AB048246 TSC_hg19_v1_chr14_+_51706980 AK302416 BC036460 BC016769 BC050366 AK075395 BC032834 AK303134 AL080080 BC056874 AY358640 AK312905 DQ891674 DQ894860 CU690352	-607178	+	NM_001243773 NM_001243774 NM_053064 AK092371	12949	+	TSC_hg19_v1_chr14_+_52327329 AK307171	13196	+	AK001024 AK311334 TSC_hg19_v1_chr14_+_52327363	13237	+	BX161430|FRMD6|122786|FERM domain containing 6##NM_152330|FRMD6|122786|FERM domain containing 6##BC020521|FRMD6|122786|FERM domain containing 6##AK315764|FRMD6|122786|FERM domain containing 6##AK055545|FRMD6|122786|FERM domain containing 6##BX647863|FRMD6|122786|FERM domain containing 6##AL833158|FRMD6|122786|FERM domain containing 6##NM_001042481|FRMD6|122786|FERM domain containing 6##NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1##AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1##BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1##BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1##BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1##AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1##BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1##AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1##AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1##BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1##AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1##AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1##NM_001243773|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_001243774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	0.069174	
chr16	20818120	20818238	reg1032845.p2	3.837	+	TSC_hg19_v1_chr16_+_20818060 AK314458 BC068503	-135	+	NM_001144924 NM_001199053 NM_030941 TSC_hg19_v1_chr16_+_20817848 BC007646 AF332193 AL136763	-363	+	AK292594 TSC_hg19_v1_chr16_-_20817795 AK304347 BC010503 NM_001142725 NM_080663 AK127391	-394	-	AK308690 NM_020424	93377	+	BX648998 NM_173475 TSC_hg19_v1_chr16_-_20911681 BC040442 BX648185	93471	-	AK311415 NM_001128301 NM_001128302 TSC_hg19_v1_chr16_+_20912121 AK311881	93942	+	AK314458|LOC81691|81691|exonuclease NEF-sp##BC068503|LOC81691|81691|exonuclease NEF-sp##NM_001144924|LOC81691|81691|exonuclease NEF-sp##NM_001199053|LOC81691|81691|exonuclease NEF-sp##NM_030941|LOC81691|81691|exonuclease NEF-sp##BC007646|LOC81691|81691|exonuclease NEF-sp##AF332193|LOC81691|81691|exonuclease NEF-sp##AL136763|LOC81691|81691|exonuclease NEF-sp##AK292594|ERI2|112479|ERI1 exoribonuclease family member 2##AK304347|ERI2|112479|ERI1 exoribonuclease family member 2##BC010503|ERI2|112479|ERI1 exoribonuclease family member 2##NM_001142725|ERI2|112479|ERI1 exoribonuclease family member 2##NM_080663|ERI2|112479|ERI1 exoribonuclease family member 2##AK127391|ERI2|112479|ERI1 exoribonuclease family member 2##AK308690|LYRM1|57149|LYR motif containing 1##NM_020424|LYRM1|57149|LYR motif containing 1##BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##AK311415|LYRM1|57149|LYR motif containing 1##NM_001128301|LYRM1|57149|LYR motif containing 1##NM_001128302|LYRM1|57149|LYR motif containing 1##AK311881|LYRM1|57149|LYR motif containing 1	0.360639	CTCF.p2:28:0.361
chr22	33917875	33917953	reg1037171.p2	3.837	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-463559	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-515188	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-720162	+	AJ007583 AB011181 NM_004737 NM_133642	398456	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1544235	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1735562	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr5	132090838	132090946	reg1036345.p1	3.837	+	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	-7748	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	-17675	-	NM_000589 NM_172348	-81520	+	TSC_hg19_v1_chr5_-_132112954 BC140759 BC171779 AK057797 AF179995 AF440761 AF440762 D86957 NM_001098811 NM_001098812 NM_015146	22112	-	AF440763 NM_001098813 TSC_hg19_v1_chr5_-_132113705	22695	-	TSC_hg19_v1_chr5_+_132149022 NM_175873	58135	+	AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##BC140759|SEPT8|23176|septin 8##BC171779|SEPT8|23176|septin 8##AK057797|SEPT8|23176|septin 8##AF179995|SEPT8|23176|septin 8##AF440761|SEPT8|23176|septin 8##AF440762|SEPT8|23176|septin 8##D86957|SEPT8|23176|septin 8##NM_001098811|SEPT8|23176|septin 8##NM_001098812|SEPT8|23176|septin 8##NM_015146|SEPT8|23176|septin 8##AF440763|SEPT8|23176|septin 8##NM_001098813|SEPT8|23176|septin 8##NM_175873|ANKRD43|134548|ankyrin repeat domain 43	0.011137	
chr5	151651092	151651193	reg1033872.p1	3.837	+	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	-346780	-	TSC_hg19_v1_chr5_+_151151662 X78262	-499478	+	TSC_hg19_v1_chr5_+_151151516 U32519 BC108278	-499613	+	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	133609	-	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	1219123	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	1767315	-	AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##X78262|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##U32519|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##BC108278|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2	0.436189	CTCF.p2:34:0.436
chr9	120009737	120009833	reg1033798.p2	3.837	+	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	-560179	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	-560323	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	-1093715	+	TSC_hg19_v1_chr9_-_120177318 AB014534 BC146756 NM_014010	167528	-	TSC_hg19_v1_chr9_-_120177336 BX649176	167549	-	TSC_hg19_v1_chr9_+_120466459 NM_138554 AK290053	456679	+	NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##AB014534|ASTN2|23245|astrotactin 2##BC146756|ASTN2|23245|astrotactin 2##NM_014010|ASTN2|23245|astrotactin 2##BX649176|ASTN2|23245|astrotactin 2##NM_138554|TLR4|7099|toll-like receptor 4##AK290053|TLR4|7099|toll-like receptor 4	0.0	
chr11	26353543	26353671	reg1037936.p1	3.836	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-1834958	+	NM_001195637	-3471636	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-3502262	-	NM_031418 AK302659	123	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	240133	-	BC049207 NM_178498	389952	-	AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	0.013828	
chr1	157686837	157686949	reg1037207.p2	3.836	+	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	-16366	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	-119092	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	-164663	-	CU686705 AK301113 AY043465 AF459633 AY358130 AK303549 BC069185 NM_030764	59999	-	CU689698 AF329488 BC021274 AK315748 AK096690 BC033690 AF459634 AY043464 NM_001159397 NM_001159398 NM_052938	102992	-	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	124669	-	DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AK301113|FCRL2|79368|Fc receptor-like 2##AY043465|FCRL2|79368|Fc receptor-like 2##AF459633|FCRL2|79368|Fc receptor-like 2##AY358130|FCRL2|79368|Fc receptor-like 2##AK303549|FCRL2|79368|Fc receptor-like 2##BC069185|FCRL2|79368|Fc receptor-like 2##NM_030764|FCRL2|79368|Fc receptor-like 2##AF329488|FCRL1|115350|Fc receptor-like 1##BC021274|FCRL1|115350|Fc receptor-like 1##AK315748|FCRL1|115350|Fc receptor-like 1##AK096690|FCRL1|115350|Fc receptor-like 1##BC033690|FCRL1|115350|Fc receptor-like 1##AF459634|FCRL1|115350|Fc receptor-like 1##AY043464|FCRL1|115350|Fc receptor-like 1##NM_001159397|FCRL1|115350|Fc receptor-like 1##NM_001159398|FCRL1|115350|Fc receptor-like 1##NM_052938|FCRL1|115350|Fc receptor-like 1##DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like	0.0	
chr12	16135544	16135688	reg1032723.p1	3.836	+	TSC_hg19_v1_chr12_+_16064282 AK024614 AK222541 AK296697	-71325	+	TSC_hg19_v1_chr12_+_16064265 BC056234	-71360	+	BC041328 NM_015954 TSC_hg19_v1_chr12_+_16064223	-71450	+	NM_001170798	295002	-	NM_145792	364459	+	TSC_hg19_v1_chr12_+_16500585 BC062473 NM_020300 AK291148 AK309707 BC005923 BC056863 NM_145791	365003	+	AK024614|DERA|51071|deoxyribose-phosphate aldolase (putative)##AK222541|DERA|51071|deoxyribose-phosphate aldolase (putative)##AK296697|DERA|51071|deoxyribose-phosphate aldolase (putative)##BC056234|DERA|51071|deoxyribose-phosphate aldolase (putative)##BC041328|DERA|51071|deoxyribose-phosphate aldolase (putative)##NM_015954|DERA|51071|deoxyribose-phosphate aldolase (putative)##NM_001170798|SLC15A5|729025|solute carrier family 15, member 5##NM_145792|MGST1|4257|microsomal glutathione S-transferase 1##NM_020300|MGST1|4257|microsomal glutathione S-transferase 1##AK291148|MGST1|4257|microsomal glutathione S-transferase 1##AK309707|MGST1|4257|microsomal glutathione S-transferase 1##BC005923|MGST1|4257|microsomal glutathione S-transferase 1##BC056863|MGST1|4257|microsomal glutathione S-transferase 1##NM_145791|MGST1|4257|microsomal glutathione S-transferase 1	0.014497	
chr12	39299448	39299545	reg1007143.p1	3.836	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	-113	-	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-588871	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-5124023	+	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	537503	-	AK314254 NM_005164	714346	-	BC038754 NM_001031748 BC048120 AK097445	720499	+	AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40	0.099692	
chr13	100033168	100033303	reg1032000.p1	3.836	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-73537	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-122621	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-180116	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	120465	+	TSC_hg19_v1_chr13_+_100153777 BC130293	120547	+	BC041830 TSC_hg19_v1_chr13_+_100229390	196142	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.0	
chr14	93539113	93539238	reg1029800.p1	3.836	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-149578	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	-149731	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-278489	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	42416	-	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	43039	-	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	112025	-	AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1	0.0	
chr16	11269748	11269922	reg1037161.p1	3.836	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-231392	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-233600	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-233669	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	80215	-	X63758 BC096135 BC096136 BC096137 NM_005425	93303	-	NM_021247	97616	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.39201	CTCF.p2:-6:0.392
chr1	71559745	71559841	reg1033607.p2	3.836	+	NM_005455 NM_203350	-12822	-	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	-13086	-	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	-46414	-	TSC_hg19_v1_chr1_-_72748182 AK295481 BX538014 AK092307 AX747470 NM_173808	1188418	-	TSC_hg19_v1_chr1_-_72748491 AY358132	1188712	-	AK131476 BC020778 BX647210 TSC_hg19_v1_chr1_-_74663861 NM_001105659	3104055	-	NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK295481|NEGR1|257194|neuronal growth regulator 1##BX538014|NEGR1|257194|neuronal growth regulator 1##AK092307|NEGR1|257194|neuronal growth regulator 1##NM_173808|NEGR1|257194|neuronal growth regulator 1##AK131476|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BC020778|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##BX647210|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3##NM_001105659|LRRIQ3|127255|leucine-rich repeats and IQ motif containing 3	0.871979	CTCF.p2:4:0.872
chr17	18754661	18754728	reg1042843.p2	3.836	+	TSC_hg19_v1_chr17_+_18684595 BC008430 NM_016078 AK290813 BX537929 BX648167	-70092	+	NM_031456 BC028364 AK310383 AL136822	-107338	+	AK301647 DQ232882 NM_001037330 AK316368 AK301639 AK298836 BC146902 BC146907	-129278	+	NM_001243936 NM_001243942 TSC_hg19_v1_chr17_+_18759671 BX648850 AK303911	4947	+	NM_001243941 NM_002767 TSC_hg19_v1_chr17_+_18761443 AK313087	6718	+	TSC_hg19_v1_chr17_+_18761445 BC106050 AK304544	6776	+	BC008430|FAM18B1|51030|family with sequence similarity 18, member B1##NM_016078|FAM18B1|51030|family with sequence similarity 18, member B1##AK290813|FAM18B1|51030|family with sequence similarity 18, member B1##BX537929|FAM18B1|51030|family with sequence similarity 18, member B1##BX648167|FAM18B1|51030|family with sequence similarity 18, member B1##NM_031456|FBXW10|10517|F-box and WD repeat domain containing 10##BC028364|FBXW10|10517|F-box and WD repeat domain containing 10##AK310383|FBXW10|10517|F-box and WD repeat domain containing 10##AL136822|FBXW10|10517|F-box and WD repeat domain containing 10##AK301647|TRIM16L|147166|tripartite motif containing 16-like##DQ232882|TRIM16L|147166|tripartite motif containing 16-like##NM_001037330|TRIM16L|147166|tripartite motif containing 16-like##AK316368|TRIM16L|147166|tripartite motif containing 16-like##AK301639|TRIM16L|147166|tripartite motif containing 16-like##AK298836|TRIM16L|147166|tripartite motif containing 16-like##BC146902|TRIM16L|147166|tripartite motif containing 16-like##BC146907|TRIM16L|147166|tripartite motif containing 16-like##NM_001243936|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##NM_001243942|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BX648850|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK303911|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##NM_001243941|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##NM_002767|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK313087|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC106050|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AK304544|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2	0.812795	CTCF.p2:8:0.650
chr20	30313600	30313689	reg1035660.p1	3.836	+	TSC_hg19_v1_chr20_-_30311772 BX647525	-1904	-	TSC_hg19_v1_chr20_-_30310672 AY263336 BC019307 NM_001191 NM_138578 AK290968 AY263335 CR936637	-2978	-	BC032024 TSC_hg19_v1_chr20_-_30288101	-25547	-	NM_012112 TSC_hg19_v1_chr20_+_30327092 AK312549 AB024704 AF098158 AF287265 BC020207 BC004136	13393	+	AJ272502 BC092413 NM_033118 BX647635	93540	+	AF042831 BT009768 AB464535 DQ896105 EU176391 BC013408 NM_004118	119725	-	BX647525|BCL2L1|598|BCL2-like 1##AY263336|BCL2L1|598|BCL2-like 1##BC019307|BCL2L1|598|BCL2-like 1##NM_001191|BCL2L1|598|BCL2-like 1##NM_138578|BCL2L1|598|BCL2-like 1##AK290968|BCL2L1|598|BCL2-like 1##AY263335|BCL2L1|598|BCL2-like 1##CR936637|BCL2L1|598|BCL2-like 1##NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AJ272502|MYLK2|85366|myosin light chain kinase 2##BC092413|MYLK2|85366|myosin light chain kinase 2##NM_033118|MYLK2|85366|myosin light chain kinase 2##BX647635|MYLK2|85366|myosin light chain kinase 2##AF042831|FOXS1|2307|forkhead box S1##BT009768|FOXS1|2307|forkhead box S1##DQ896105|FOXS1|2307|forkhead box S1##EU176391|FOXS1|2307|forkhead box S1##BC013408|FOXS1|2307|forkhead box S1##NM_004118|FOXS1|2307|forkhead box S1	0.859001	CTCF.p2:0:0.859
chr2	195684211	195684366	reg1040768.p1	3.836	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-2624659	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	-2624974	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-2972317	-	BC029413 NM_001127257 CR749813	837287	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	837620	+	AB463018 AF327442 AK094515 NM_018897 AB023161	1249207	-	BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7	0.0	
chr22	44421700	44421867	reg1032985.p2	3.836	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	-1584	+	AF303887 NM_001003828	-26693	+	TSC_hg19_v1_chr22_+_44351384 AY189688 AF151809 BC007830 AK222657 BC015200 AK297770 AK312773 CR456483 CU013033 CU013321 AB463278 DQ893124 DQ896401 CU677235	-70389	+	AK308443 NM_001243386	400	+	BC039811 NM_001243385	43213	+	NM_001137605 AK309348 AK293360	147073	+	NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##AF303887|PARVB|29780|parvin, beta##NM_001003828|PARVB|29780|parvin, beta##AY189688|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AF151809|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC007830|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK222657|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##BC015200|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK297770|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK312773|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CR456483|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013033|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##CU013321|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ893124|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##DQ896401|SAMM50|25813|sorting and assembly machinery component 50 homolog (S. cerevisiae)##AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta##BC039811|PARVB|29780|parvin, beta##NM_001243385|PARVB|29780|parvin, beta##NM_001137605|PARVG|64098|parvin, gamma##AK309348|PARVG|64098|parvin, gamma##AK293360|PARVG|64098|parvin, gamma	0.0	
chr2	62530860	62531017	reg1027105.p1	3.836	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-107672	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-398109	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-415152	-	BC047439 AK091902 AX747245 NM_198276	202601	-	AK292545 NM_001142615	370047	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	402028	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.322807	CTCF.p2:-35:0.323
chr22	21633905	21634032	reg1035975.p2	3.835	+	BC062565 AJ000730 BC008814 NM_004173 TSC_hg19_v1_chr22_-_21386851	-247117	-	BC064805 NM_001159554 AB002058 CR456535 BC109209 AB528202 CU013135 CU013423 AK309079 NM_005446 BC047287 BC063553 BC033488	-264508	+	TSC_hg19_v1_chr22_+_21356508 AK096901 BC065749	-277487	+	NM_001128633	103694	+	NM_001128635	104071	+	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	137708	+	BC062565|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AJ000730|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC008814|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_004173|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC064805|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_001159554|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AB002058|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CR456535|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC109209|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013135|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013423|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK309079|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_005446|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC047287|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC063553|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC033488|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK096901|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##BC065749|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2	0.827011	CTCF.p2:3:0.827
chr5	17309313	17309379	reg1042341.p1	3.835	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-91506	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-91734	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-372961	-	AK295087 BC031051 NM_001167667 NM_004934	2678976	-	TSC_hg19_v1_chr5_+_21459621 AK290693	4150263	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	4150302	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.0	
chr6	113102571	113102712	reg1004989.p3	3.835	+	AK122906 NM_001013734	-434110	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-526746	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-526836	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	1076093	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	1189631	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	1189695	-	AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2	0.740428	CTCF.p2:22:0.740
chr8	144025104	144025202	reg1033356.p1	3.835	+	AB463555 NM_000498 X54741	-25897	-	X55764 AF478474 BC096285 BC096286 BC096287 NM_000497 NM_001026213	-63920	-	D84290 NM_002066 BC126336 BC126338	-108932	+	TSC_hg19_v1_chr8_+_144099945 NM_001127213 NM_002346 AK223074 AK129615 AK311983 BC003392 U42376 Z68179	74789	+	TSC_hg19_v1_chr8_+_144102304 BC119708 BC119709 AB529045 U56145	77174	+	TSC_hg19_v1_chr8_+_144120683 BC073830 AK094450 NM_173687 BC120993 BC063497	95522	+	NM_000498|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##X54741|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##X55764|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##AF478474|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096285|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096286|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##BC096287|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_000497|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##NM_001026213|CYP11B1|1584|cytochrome P450, family 11, subfamily B, polypeptide 1##D84290|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##NM_002066|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126336|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##BC126338|GML|2765|glycosylphosphatidylinositol anchored molecule like protein##NM_001127213|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002346|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK223074|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK129615|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK311983|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC003392|LY6E|4061|lymphocyte antigen 6 complex, locus E##U42376|LY6E|4061|lymphocyte antigen 6 complex, locus E##Z68179|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119708|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119709|LY6E|4061|lymphocyte antigen 6 complex, locus E##U56145|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC073830|C8orf31|286122|chromosome 8 open reading frame 31##AK094450|C8orf31|286122|chromosome 8 open reading frame 31##NM_173687|C8orf31|286122|chromosome 8 open reading frame 31##BC120993|C8orf31|286122|chromosome 8 open reading frame 31##BC063497|C8orf31|286122|chromosome 8 open reading frame 31	0.573649	CTCF.p2:-12:0.465
chr8	29870387	29870456	reg1040582.p2	3.835	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-662351	-	AL137704 NM_057158	-664100	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-749807	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	70053	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	70151	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	82522	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chrX	147612376	147612518	reg1013829.p2	3.835	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-30259	+	BC034320 NM_152578 AY211917 AK098602	-549592	+	TSC_hg19_v1_chrX_+_146993685 CU691632	-618754	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	188165	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	974327	-	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	1009983	-	NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434	0.0	
chr10	103649428	103649494	reg1040511.p2	3.834	+	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	-45854	-	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	-49849	-	TSC_hg19_v1_chr10_-_103578213 NM_001142434 NM_012215	-71243	-	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	166451	-	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	175681	+	AK300588 TSC_hg19_v1_chr10_-_103874641	225158	-	BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##NM_001142434|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##NM_012215|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6##AK300588|LDB1|8861|LIM domain binding 1	0.0	
chr11	120580605	120580786	reg1035530.p2	3.834	+	AB384776 NM_014619 S67803	-49668	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-198230	+	BC063117 NM_001198665 NM_015313	-373078	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	314115	+	NM_005422	392679	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	582710	+	NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.0	
chr11	44618567	44618721	reg1035557.p1	3.834	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-31417	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-31479	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-286968	-	NM_130783	167331	+	TSC_hg19_v1_chr11_-_44956087 AF010315	337463	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	353773	-	AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_130783|TSPAN18|90139|tetraspanin 18##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11	0.0	
chr12	131939270	131939377	reg1007174.p1	3.834	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-500870	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-582612	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-582698	+	TSC_hg19_v1_chr12_+_132195623 BC142980	256290	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	256333	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	373643	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.0	
chr12	97485293	97485359	reg1045295.p2	3.834	+	BC027605 NM_001135175	-184083	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-184295	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-691009	-	TSC_hg19_v1_chr12_-_98897622 AK126817	1412301	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	1424041	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	1424081	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.0	
chr1	45805931	45806075	reg1036102.p2	3.834	+	TSC_hg19_v1_chr1_+_45805883 AK298162 AK093320 BC009364 CU679325 CR457320	-103	+	AB032924 AB032925 AB032926 AB025227 NM_001048174 AB032927 AB032928 AB032929 NM_001048172 NM_001048173 CU678424 AB590565 AB032920 AB032921 AB032922 AB032923 BC003178 AK293830 NM_001048171 NM_001128425 NM_012222	-130	-	TSC_hg19_v1_chr1_+_45805845 AK024011	-174	+	TSC_hg19_v1_chr1_-_45956836 BX648441 AK027573 AK294172 BC022194 AB057597 AJ132545 AK299269 NM_007170 AK302494	150830	-	AK098537 NM_015506 TSC_hg19_v1_chr1_+_45965990 AL080062 BC006122	159936	+	X67951 L19184 TSC_hg19_v1_chr1_-_45987557 AK311898 BC007063 AK131049 BC021683 NM_002574 NM_181696 NM_181697	181575	-	AK298162|TOE1|114034|target of EGR1, member 1 (nuclear)##AK093320|TOE1|114034|target of EGR1, member 1 (nuclear)##BC009364|TOE1|114034|target of EGR1, member 1 (nuclear)##CR457320|TOE1|114034|target of EGR1, member 1 (nuclear)##AB032924|MUTYH|4595|mutY homolog (E. coli)##AB032925|MUTYH|4595|mutY homolog (E. coli)##AB032926|MUTYH|4595|mutY homolog (E. coli)##AB025227|MUTYH|4595|mutY homolog (E. coli)##NM_001048174|MUTYH|4595|mutY homolog (E. coli)##AB032927|MUTYH|4595|mutY homolog (E. coli)##AB032928|MUTYH|4595|mutY homolog (E. coli)##AB032929|MUTYH|4595|mutY homolog (E. coli)##NM_001048172|MUTYH|4595|mutY homolog (E. coli)##NM_001048173|MUTYH|4595|mutY homolog (E. coli)##AB032920|MUTYH|4595|mutY homolog (E. coli)##AB032921|MUTYH|4595|mutY homolog (E. coli)##AB032922|MUTYH|4595|mutY homolog (E. coli)##AB032923|MUTYH|4595|mutY homolog (E. coli)##BC003178|MUTYH|4595|mutY homolog (E. coli)##AK293830|MUTYH|4595|mutY homolog (E. coli)##NM_001048171|MUTYH|4595|mutY homolog (E. coli)##NM_001128425|MUTYH|4595|mutY homolog (E. coli)##NM_012222|MUTYH|4595|mutY homolog (E. coli)##AK024011|TOE1|114034|target of EGR1, member 1 (nuclear)##BX648441|TESK2|10420|testis-specific kinase 2##AK027573|TESK2|10420|testis-specific kinase 2##AK294172|TESK2|10420|testis-specific kinase 2##BC022194|TESK2|10420|testis-specific kinase 2##AB057597|TESK2|10420|testis-specific kinase 2##AJ132545|TESK2|10420|testis-specific kinase 2##AK299269|TESK2|10420|testis-specific kinase 2##NM_007170|TESK2|10420|testis-specific kinase 2##AK302494|TESK2|10420|testis-specific kinase 2##AK098537|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##NM_015506|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##AL080062|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BC006122|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##X67951|PRDX1|5052|peroxiredoxin 1##L19184|PRDX1|5052|peroxiredoxin 1##AK311898|PRDX1|5052|peroxiredoxin 1##BC007063|PRDX1|5052|peroxiredoxin 1##AK131049|PRDX1|5052|peroxiredoxin 1##BC021683|PRDX1|5052|peroxiredoxin 1##NM_002574|PRDX1|5052|peroxiredoxin 1##NM_181696|PRDX1|5052|peroxiredoxin 1##NM_181697|PRDX1|5052|peroxiredoxin 1	0.0	
chr18	76745117	76745197	reg1028330.p1	3.834	+	BC129827 BC148296 NM_171999	-4883	+	BC016792 TSC_hg19_v1_chr18_-_75705702	-1039465	-	TSC_hg19_v1_chr18_+_74961925 NM_001480	-1783191	+	BC036473 TSC_hg19_v1_chr18_+_76829395 AK308291 BC022535 BC125219 BC125220 NM_198531 AK093704 AX748269 AK295981	84242	+	TSC_hg19_v1_chr18_+_76829420 BC053561	84292	+	TSC_hg19_v1_chr18_+_76856487 CU690988	111342	+	BC148296|SALL3|27164|sal-like 3 (Drosophila)##NM_171999|SALL3|27164|sal-like 3 (Drosophila)##NM_001480|GALR1|2587|galanin receptor 1##BC036473|ATP9B|374868|ATPase, class II, type 9B##AK308291|ATP9B|374868|ATPase, class II, type 9B##BC022535|ATP9B|374868|ATPase, class II, type 9B##BC125219|ATP9B|374868|ATPase, class II, type 9B##BC125220|ATP9B|374868|ATPase, class II, type 9B##NM_198531|ATP9B|374868|ATPase, class II, type 9B##AK093704|ATP9B|374868|ATPase, class II, type 9B##AK295981|ATP9B|374868|ATPase, class II, type 9B##BC053561|ATP9B|374868|ATPase, class II, type 9B	0.714625	CTCF.p2:-8:0.715
chr4	185375046	185375148	reg1030086.p2	3.834	+	BC035035 AY358676 AK057370 NM_153343	-236032	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-547186	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-547277	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	20584	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	195504	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	195736	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr5	176871497	176871607	reg1034707.p2	3.834	+	TSC_hg19_v1_chr5_+_176853676 NM_001004105 NM_001004106 NM_002082 BC009277 L16862 BC017272 AF040751 AF040752 CU677893 CU679285 AB527614	-17794	+	TSC_hg19_v1_chr5_-_176836552 AB095845 NM_000505	-34997	-	M11723 M31315 TSC_hg19_v1_chr5_-_176836522	-35047	-	BC024233 NM_001174101 NM_030567 TSC_hg19_v1_chr5_+_176873814 BC004261	2267	+	NM_001174102 BC021240	3777	+	NM_080881	28318	-	NM_001004105|GRK6|2870|G protein-coupled receptor kinase 6##NM_001004106|GRK6|2870|G protein-coupled receptor kinase 6##NM_002082|GRK6|2870|G protein-coupled receptor kinase 6##BC009277|GRK6|2870|G protein-coupled receptor kinase 6##L16862|GRK6|2870|G protein-coupled receptor kinase 6##BC017272|GRK6|2870|G protein-coupled receptor kinase 6##AF040751|GRK6|2870|G protein-coupled receptor kinase 6##AF040752|GRK6|2870|G protein-coupled receptor kinase 6##AB095845|F12|2161|coagulation factor XII (Hageman factor)##NM_000505|F12|2161|coagulation factor XII (Hageman factor)##M11723|F12|2161|coagulation factor XII (Hageman factor)##M31315|F12|2161|coagulation factor XII (Hageman factor)##BC024233|PRR7|80758|proline rich 7 (synaptic)##NM_001174101|PRR7|80758|proline rich 7 (synaptic)##NM_030567|PRR7|80758|proline rich 7 (synaptic)##BC004261|PRR7|80758|proline rich 7 (synaptic)##NM_001174102|PRR7|80758|proline rich 7 (synaptic)##BC021240|PRR7|80758|proline rich 7 (synaptic)##NM_080881|DBN1|1627|drebrin 1	0.0	
chr5	39692253	39692361	reg1041229.p1	3.834	+	TSC_hg19_v1_chr5_-_39425304 NM_001244871 NM_001343	-266990	-	TSC_hg19_v1_chr5_-_39425082 AK314381	-267243	-	BC003064 U53446 TSC_hg19_v1_chr5_-_39424971	-267356	-	TSC_hg19_v1_chr5_+_40680033 BC027934 NM_000958	987720	+	TSC_hg19_v1_chr5_+_40680042 L25124	987737	+	AF023244 BC036536 BC015701 AK312560 AK307131 AK303119 NM_012382	1063733	-	NM_001244871|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##NM_001343|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##AK314381|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC003064|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##U53446|DAB2|1601|disabled homolog 2, mitogen-responsive phosphoprotein (Drosophila)##BC027934|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##NM_000958|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##L25124|PTGER4|5734|prostaglandin E receptor 4 (subtype EP4)##AF023244|TTC33|23548|tetratricopeptide repeat domain 33##BC036536|TTC33|23548|tetratricopeptide repeat domain 33##BC015701|TTC33|23548|tetratricopeptide repeat domain 33##AK312560|TTC33|23548|tetratricopeptide repeat domain 33##AK307131|TTC33|23548|tetratricopeptide repeat domain 33##AK303119|TTC33|23548|tetratricopeptide repeat domain 33##NM_012382|TTC33|23548|tetratricopeptide repeat domain 33	0.574463	CTCF.p2:-10:0.574
chr7	121078460	121078641	reg1034714.p1	3.834	+	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	-42136	-	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	-42213	-	AF169963 NM_057168	-109461	+	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	434611	+	TSC_hg19_v1_chr7_+_121513214 U88967	434671	+	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	705739	-	AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase	0.0	
chr7	2404585	2404694	reg1036814.p2	3.834	+	TSC_hg19_v1_chr7_+_2394547 BC110865	-10092	+	BC001173 TSC_hg19_v1_chr7_+_2394525	-10114	+	TSC_hg19_v1_chr7_+_2394509 U62583	-10123	+	TSC_hg19_v1_chr7_+_2443191 NM_001243794 NM_001243795 NM_018641	38541	+	TSC_hg19_v1_chr7_+_2443245 BC095492 BC002918 BC015954 AK223191 AK223211 AK313484 AF239822 AY358574	38604	+	AK096284 NM_001166355	147523	+	BC110865|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##BC001173|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##U62583|EIF3B|8662|eukaryotic translation initiation factor 3, subunit B##NM_001243794|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_001243795|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##NM_018641|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC095492|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC002918|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##BC015954|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK223191|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK223211|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK313484|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AF239822|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AY358574|CHST12|55501|carbohydrate (chondroitin 4) sulfotransferase 12##AK096284|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase##NM_001166355|LFNG|3955|LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	0.960604	CTCF.p2:1:0.961
chr9	129148481	129148593	reg1038439.p1	3.834	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-59370	+	AK309713 NM_001134778	-638060	+	NM_006195 X59841 BC094883 TSC_hg19_v1_chr9_+_128509699 AK312717 AB464062 AF355141 AF355142 AK289376 AK297093	-638837	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	228224	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	418773	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	474407	+	NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_006195|PBX3|5090|pre-B-cell leukemia homeobox 3##X59841|PBX3|5090|pre-B-cell leukemia homeobox 3##BC094883|PBX3|5090|pre-B-cell leukemia homeobox 3##AK312717|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355141|PBX3|5090|pre-B-cell leukemia homeobox 3##AF355142|PBX3|5090|pre-B-cell leukemia homeobox 3##AK289376|PBX3|5090|pre-B-cell leukemia homeobox 3##AK297093|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34	0.902011	CTCF.p2:22:0.902
chrX	148232072	148232177	reg1038311.p1	3.834	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-431512	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-649936	+	BC034320 NM_152578 AY211917 AK098602	-1169269	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	354650	-	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	390306	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	390470	+	AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A	0.297188	CTCF.p2:-12:0.297
chr10	116197788	116197901	reg1014949.p2	3.833	+	BC024314 NM_001001936 NM_032550	-33330	-	AK123108 BC033212 AK027470 TSC_hg19_v1_chr10_-_116164254 AK294969 AK291712 AF474151	-33602	-	TSC_hg19_v1_chr10_+_115999012 AK122716 NM_198496 AJ536328 AJ616914 BC128588 AY572972 BC143380	-198685	+	CU677968 TSC_hg19_v1_chr10_-_116251632	53763	-	TSC_hg19_v1_chr10_-_116286631 AK298709 BC002448	88758	-	TSC_hg19_v1_chr10_-_116286673 CR749819 NM_006720 AK098277	88835	-	BC024314|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_001001936|AFAP1L2|84632|actin filament associated protein 1-like 2##NM_032550|AFAP1L2|84632|actin filament associated protein 1-like 2##AK123108|AFAP1L2|84632|actin filament associated protein 1-like 2##BC033212|AFAP1L2|84632|actin filament associated protein 1-like 2##AK294969|AFAP1L2|84632|actin filament associated protein 1-like 2##AK291712|AFAP1L2|84632|actin filament associated protein 1-like 2##AF474151|AFAP1L2|84632|actin filament associated protein 1-like 2##AK122716|VWA2|340706|von Willebrand factor A domain containing 2##NM_198496|VWA2|340706|von Willebrand factor A domain containing 2##AJ536328|VWA2|340706|von Willebrand factor A domain containing 2##AJ616914|VWA2|340706|von Willebrand factor A domain containing 2##BC128588|VWA2|340706|von Willebrand factor A domain containing 2##AY572972|VWA2|340706|von Willebrand factor A domain containing 2##BC143380|VWA2|340706|von Willebrand factor A domain containing 2##AK298709|ABLIM1|3983|actin binding LIM protein 1##BC002448|ABLIM1|3983|actin binding LIM protein 1##CR749819|ABLIM1|3983|actin binding LIM protein 1##NM_006720|ABLIM1|3983|actin binding LIM protein 1##AK098277|ABLIM1|3983|actin binding LIM protein 1	0.0	
chr11	114645610	114645686	reg1021023.p2	3.833	+	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-96400	+	AK000134 AK225236 TSC_hg19_v1_chr11_-_114466485 NM_001077639 NM_017678	-179170	-	AY358805 TSC_hg19_v1_chr11_-_114466403	-179243	-	AY309502 TSC_hg19_v1_chr11_-_115088658	443000	-	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	729532	-	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	1998050	-	NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##AK000134|FAM55D|54827|family with sequence similarity 55, member D##AK225236|FAM55D|54827|family with sequence similarity 55, member D##NM_001077639|FAM55D|54827|family with sequence similarity 55, member D##NM_017678|FAM55D|54827|family with sequence similarity 55, member D##AY358805|FAM55D|54827|family with sequence similarity 55, member D##AY309502|CADM1|23705|cell adhesion molecule 1##AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)	0.0	
chr15	64263047	64263133	reg1040084.p1	3.833	+	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-136950	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-136970	-	TSC_hg19_v1_chr15_-_64126081 U50078	-137006	-	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	75520	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	123007	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	125050	+	AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1	0.0	
chr16	14383711	14383813	reg1030387.p1	3.833	+	BC047761 TSC_hg19_v1_chr16_+_14294209	-89564	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-103244	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-218676	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	340266	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	340371	-	NM_016561 TSC_hg19_v1_chr16_+_14726776 AF173003	342977	+	BC047761|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease##NM_016561|BFAR|51283|bifunctional apoptosis regulator##AF173003|BFAR|51283|bifunctional apoptosis regulator	0.833442	CTCF.p2:17:0.833
chr17	48073872	48074039	reg1002817.p1	3.833	+	BC012361 BC028970 AK075167 TSC_hg19_v1_chr17_-_48072589 AK313257 NM_005220	-1377	-	NM_001934 U73328	-23826	+	U31762 TSC_hg19_v1_chr17_+_48049688	-24272	+	AK293323 AK303384 NM_002204 NM_005501 TSC_hg19_v1_chr17_+_48133350	59386	+	TSC_hg19_v1_chr17_+_48133357 AB209658 BC150190 BC015344	59491	+	AK055119 NM_001199898	98145	+	BC012361|DLX3|1747|distal-less homeobox 3##BC028970|DLX3|1747|distal-less homeobox 3##AK075167|DLX3|1747|distal-less homeobox 3##AK313257|DLX3|1747|distal-less homeobox 3##NM_005220|DLX3|1747|distal-less homeobox 3##NM_001934|DLX4|1748|distal-less homeobox 4##U73328|DLX4|1748|distal-less homeobox 4##U31762|DLX4|1748|distal-less homeobox 4##AK293323|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AK303384|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##NM_002204|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##NM_005501|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AB209658|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC150190|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##BC015344|ITGA3|3675|integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)##AK055119|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2##NM_001199898|PDK2|5164|pyruvate dehydrogenase kinase, isozyme 2	0.0	
chr20	35294977	35295083	reg1031018.p1	3.833	+	BC042041 AK291513 NM_032214 NM_175077	-20443	-	TSC_hg19_v1_chr20_+_35234211 BC004446 BC001871 AF274936 S83364	-60726	+	TSC_hg19_v1_chr20_+_35234167 AF112213	-60867	+	TSC_hg19_v1_chr20_-_35374488 AK027665 AK295466 AB044943 AF251054 AK023618 AK295420	79449	-	TSC_hg19_v1_chr20_-_35374542 NM_022477 NM_032013	79522	-	TSC_hg19_v1_chr20_-_35402167 BC035821 AK093031 AX747868 AK290738 NM_001145316 NM_024918 AK301671 AK301840 BC058899 AK023408 BC026011 NM_001145315 NM_001145317 NM_001145318	107155	-	BC042041|SLA2|84174|Src-like-adaptor 2##AK291513|SLA2|84174|Src-like-adaptor 2##NM_032214|SLA2|84174|Src-like-adaptor 2##NM_175077|SLA2|84174|Src-like-adaptor 2##BC004446|C20orf24|55969|chromosome 20 open reading frame 24##BC001871|C20orf24|55969|chromosome 20 open reading frame 24##AF274936|C20orf24|55969|chromosome 20 open reading frame 24##S83364|C20orf24|55969|chromosome 20 open reading frame 24##AF112213|C20orf24|55969|chromosome 20 open reading frame 24##AK027665|NDRG3|57446|NDRG family member 3##AK295466|NDRG3|57446|NDRG family member 3##AB044943|NDRG3|57446|NDRG family member 3##AK023618|NDRG3|57446|NDRG family member 3##AK295420|NDRG3|57446|NDRG family member 3##NM_022477|NDRG3|57446|NDRG family member 3##NM_032013|NDRG3|57446|NDRG family member 3##BC035821|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK093031|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK290738|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145316|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_024918|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301671|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301840|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC058899|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK023408|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC026011|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145315|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145317|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145318|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	0.25679	CTCF.p2:-29:0.257
chr5	148828948	148829085	reg1036427.p1	3.833	+	TSC_hg19_v1_chr5_+_148786440 AK126481 CR933654 BX640700	-42534	+	AB590699 CR457192 BC113925 BC113946 AF152098 AF184969 AF218727 AY358931 AF110385 AF212311 NM_014443 TSC_hg19_v1_chr5_-_148758856	-70194	-	TSC_hg19_v1_chr5_+_148737613 AF451985 BC000014	-91393	+	AF218004 TSC_hg19_v1_chr5_-_148930935 AK303794 BC021971 BC025371 BC007246	101908	-	TSC_hg19_v1_chr5_-_148930950 AK294942	101950	-	TSC_hg19_v1_chr5_-_148931006 NM_001025105 NM_001892	101990	-	AK126481|MIR143HG|728264|MIR143 host gene (non-protein coding)##CR933654|MIR143HG|728264|MIR143 host gene (non-protein coding)##CR457192|IL17B|27190|interleukin 17B##BC113925|IL17B|27190|interleukin 17B##BC113946|IL17B|27190|interleukin 17B##AF152098|IL17B|27190|interleukin 17B##AF184969|IL17B|27190|interleukin 17B##AF218727|IL17B|27190|interleukin 17B##AY358931|IL17B|27190|interleukin 17B##AF110385|IL17B|27190|interleukin 17B##AF212311|IL17B|27190|interleukin 17B##NM_014443|IL17B|27190|interleukin 17B##AF451985|PCYOX1L|78991|prenylcysteine oxidase 1 like##BC000014|PCYOX1L|78991|prenylcysteine oxidase 1 like##AF218004|CSNK1A1|1452|casein kinase 1, alpha 1##AK303794|CSNK1A1|1452|casein kinase 1, alpha 1##BC021971|CSNK1A1|1452|casein kinase 1, alpha 1##BC025371|CSNK1A1|1452|casein kinase 1, alpha 1##BC007246|CSNK1A1|1452|casein kinase 1, alpha 1##AK294942|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001025105|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001892|CSNK1A1|1452|casein kinase 1, alpha 1	0.568902	CTCF.p2:17:0.569
chr6	64217135	64217282	reg1039982.p2	3.833	+	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	-187344	-	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	-1221207	-	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	-5929529	-	TSC_hg19_v1_chr6_+_64231650 CR749458	14447	+	TSC_hg19_v1_chr6_+_64281913 BC045571 NM_003463	64708	+	TSC_hg19_v1_chr6_+_64282432 AK312526	65227	+	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AK312526|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	0.783415	CTCF.p2:-15:0.783
chr7	129007899	129008079	reg1006717.p2	3.833	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	-3	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	-143160	+	BC009989 NM_005631	-179277	+	TSC_hg19_v1_chr7_+_129008062 AK025372	99	+	AK316073 NM_001130722	7494	+	TSC_hg19_v1_chr7_+_129074283 NM_001134336 NM_020704 AK290165 BC019064 AB032996 CU676366 AB463039 AM392619 AM392944 AM392960 AM393447	66284	+	NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2##AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001134336|FAM40B|57464|family with sequence similarity 40, member B##NM_020704|FAM40B|57464|family with sequence similarity 40, member B##AK290165|FAM40B|57464|family with sequence similarity 40, member B##BC019064|FAM40B|57464|family with sequence similarity 40, member B##AB032996|FAM40B|57464|family with sequence similarity 40, member B##AM392619|FAM40B|57464|family with sequence similarity 40, member B##AM392944|FAM40B|57464|family with sequence similarity 40, member B##AM392960|FAM40B|57464|family with sequence similarity 40, member B##AM393447|FAM40B|57464|family with sequence similarity 40, member B	0.0	
chr9	115473511	115473625	reg1034849.p1	3.833	+	TSC_hg19_v1_chr9_+_115336888 AK056181	-136638	+	BC105048 BC113515 BC143372 BC143424 TSC_hg19_v1_chr9_+_115249466	-224156	+	TSC_hg19_v1_chr9_+_115249149 AK096613 NM_133465	-224406	+	AF161411 TSC_hg19_v1_chr9_-_115480339 AF161409	6770	-	TSC_hg19_v1_chr9_-_115480398 BC065210 AK310007 BC014881 NM_021218 AK000637	6820	-	TSC_hg19_v1_chr9_+_115513056 NM_001012994	39523	+	AK056181|KIAA1958|158405|KIAA1958##BC105048|KIAA1958|158405|KIAA1958##BC113515|KIAA1958|158405|KIAA1958##BC143372|KIAA1958|158405|KIAA1958##BC143424|KIAA1958|158405|KIAA1958##AK096613|KIAA1958|158405|KIAA1958##NM_133465|KIAA1958|158405|KIAA1958##AF161411|C9orf80|58493|chromosome 9 open reading frame 80##AF161409|C9orf80|58493|chromosome 9 open reading frame 80##BC065210|C9orf80|58493|chromosome 9 open reading frame 80##AK310007|C9orf80|58493|chromosome 9 open reading frame 80##BC014881|C9orf80|58493|chromosome 9 open reading frame 80##NM_021218|C9orf80|58493|chromosome 9 open reading frame 80##AK000637|C9orf80|58493|chromosome 9 open reading frame 80##NM_001012994|SNX30|401548|sorting nexin family member 30	0.475125	CTCF.p2:-4:0.475
chrX	47479038	47479152	reg1026517.p1	3.833	+	TSC_hg19_v1_chrX_+_47441834 X03124 M12670 AK310206 AK311937 AK307222 M59906 X02598	-37272	+	TSC_hg19_v1_chrX_+_47441773 NM_003254 AK074854 AK296116 BC000866 BC007097	-37372	+	NM_001654 X04790 TSC_hg19_v1_chrX_+_47420605 AB208831 AK300975 AK130043 AK297453 AK307747 BC002466 BC007514	-58528	+	TSC_hg19_v1_chrX_-_47479098 AB591026	17	-	TSC_hg19_v1_chrX_-_47479257 BC048799 NM_006950 NM_133499	175	-	AB590250 CU677429 DQ893460 DQ896310 TSC_hg19_v1_chrX_-_47489295 AK122955 BC015756 X57748 M83652 AK310695 NM_001145252	10210	-	X03124|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M12670|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK310206|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK311937|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M59906|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X02598|TIMP1|7076|TIMP metallopeptidase inhibitor 1##NM_003254|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK074854|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK296116|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC000866|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC007097|TIMP1|7076|TIMP metallopeptidase inhibitor 1##NM_001654|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##X04790|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AB208831|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK300975|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK130043|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK297453|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK307747|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC002466|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC007514|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC048799|SYN1|6853|synapsin I##NM_006950|SYN1|6853|synapsin I##NM_133499|SYN1|6853|synapsin I##DQ893460|CFP|5199|complement factor properdin##DQ896310|CFP|5199|complement factor properdin##AK122955|CFP|5199|complement factor properdin##BC015756|CFP|5199|complement factor properdin##X57748|CFP|5199|complement factor properdin##M83652|CFP|5199|complement factor properdin##AK310695|CFP|5199|complement factor properdin##NM_001145252|CFP|5199|complement factor properdin	0.013664	
chr10	26719844	26720024	reg1031075.p2	3.832	+	M74826 BC029517 M81882 TSC_hg19_v1_chr10_+_26505702 BC126327 BC126329 AB527954 HQ258311	-214269	+	NM_000818 NM_001134366	-214699	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	-496754	+	TSC_hg19_v1_chr10_+_26727269 NM_019043	7337	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	7383	+	TSC_hg19_v1_chr10_+_26727679 BC054516	7734	+	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##HQ258311|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA##NM_019043|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	0.0	
chr10	54128650	54128716	reg1037384.p2	3.832	+	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-54568	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-669336	-	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-1294392	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	402743	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2432315	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	3230091	+	NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5	0.278042	CTCF.p2:1:0.278
chr1	244535277	244535383	reg1034464.p2	3.832	+	BC054479 NM_001012970	-19394	+	TSC_hg19_v1_chr1_+_244217286 AK310634	-318035	+	BC078175 AJ001388 NM_006352	-318787	+	CU680302 EU831433 EU831525 TSC_hg19_v1_chr1_-_244615212 AK025514 AK303886 BC012356	79846	-	TSC_hg19_v1_chr1_-_244615392 AK308749 NM_001126	80008	-	NM_001130957 NM_001242340 NM_173807 TSC_hg19_v1_chr1_+_244624690 BC032859 BC028392 AK303059 BX648685 AK302609 DQ891006 EU176575 CU689566	89371	+	BC054479|C1orf100|200159|chromosome 1 open reading frame 100##NM_001012970|C1orf100|200159|chromosome 1 open reading frame 100##BC078175|ZNF238|10472|zinc finger protein 238##AJ001388|ZNF238|10472|zinc finger protein 238##NM_006352|ZNF238|10472|zinc finger protein 238##EU831433|ADSS|159|adenylosuccinate synthase##EU831525|ADSS|159|adenylosuccinate synthase##AK025514|ADSS|159|adenylosuccinate synthase##AK303886|ADSS|159|adenylosuccinate synthase##BC012356|ADSS|159|adenylosuccinate synthase##AK308749|ADSS|159|adenylosuccinate synthase##NM_001126|ADSS|159|adenylosuccinate synthase##NM_001130957|C1orf101|257044|chromosome 1 open reading frame 101##NM_001242340|C1orf101|257044|chromosome 1 open reading frame 101##NM_173807|C1orf101|257044|chromosome 1 open reading frame 101##BC032859|C1orf101|257044|chromosome 1 open reading frame 101##BC028392|C1orf101|257044|chromosome 1 open reading frame 101##AK303059|C1orf101|257044|chromosome 1 open reading frame 101##BX648685|C1orf101|257044|chromosome 1 open reading frame 101##AK302609|C1orf101|257044|chromosome 1 open reading frame 101##DQ891006|C1orf101|257044|chromosome 1 open reading frame 101##EU176575|C1orf101|257044|chromosome 1 open reading frame 101	0.0	
chr14	69251168	69251251	reg1030027.p1	3.832	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-964689	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-967910	-	AK315462 NM_152443	-1082607	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	8511	-	NM_001244698 NM_004926	9421	-	NM_001244701 AB528867	11775	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr15	40079210	40079286	reg1013188.p2	3.832	+	AK091251 TSC_hg19_v1_chr15_+_40075106	-4142	+	AK093308 AX748045 BC045191 NM_152597	-4220	-	TSC_hg19_v1_chr15_+_39873279 AK304754 AK291639 NM_003246 AB209912 BC136469 BC136470 M14326 X14787 M25631 X04665	-205919	+	CU688250 TSC_hg19_v1_chr15_-_40212342	133037	-	BC067106 TSC_hg19_v1_chr15_-_40212465	133240	-	TSC_hg19_v1_chr15_-_40213138 D38449 NM_007223	133879	-	AK093308|FSIP1|161835|fibrous sheath interacting protein 1##BC045191|FSIP1|161835|fibrous sheath interacting protein 1##NM_152597|FSIP1|161835|fibrous sheath interacting protein 1##AK304754|THBS1|7057|thrombospondin 1##AK291639|THBS1|7057|thrombospondin 1##NM_003246|THBS1|7057|thrombospondin 1##AB209912|THBS1|7057|thrombospondin 1##BC136469|THBS1|7057|thrombospondin 1##BC136470|THBS1|7057|thrombospondin 1##M14326|THBS1|7057|thrombospondin 1##X14787|THBS1|7057|thrombospondin 1##M25631|THBS1|7057|thrombospondin 1##X04665|THBS1|7057|thrombospondin 1##BC067106|GPR176|11245|G protein-coupled receptor 176##D38449|GPR176|11245|G protein-coupled receptor 176##NM_007223|GPR176|11245|G protein-coupled receptor 176	0.0	
chr1	664422	664553	reg1030803.p1	3.832	+	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	-42445	-	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	-296839	+	NM_001005484	-595397	+	TSC_hg19_v1_chr1_-_714015 BC006361	49530	-	TSC_hg19_v1_chr1_-_762903 AK026292 BC017762	98408	-	BC042880 TSC_hg19_v1_chr1_+_763038	98526	+	NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene##AK026292|LINC00115|79854|long intergenic non-protein coding RNA 115##BC017762|LINC00115|79854|long intergenic non-protein coding RNA 115##BC042880|LOC643837|643837|uncharacterized LOC643837	0.987722	CTCF.p2:-19:0.988
chr19	12443462	12443592	reg1036409.p1	3.832	+	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	-37875	-	TSC_hg19_v1_chr19_+_12305871 AK093188 AX721123	-137621	+	AK023304 TSC_hg19_v1_chr19_+_12305836	-137694	+	AK313755 BC022523 AK092116 AX747362 NM_145276	957	-	AK024418 AK295923 NM_030824	32933	-	TSC_hg19_v1_chr19_-_12512035 BC057831 NM_001080821	68527	-	BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44##AK023304|LOC100289333|100289333|uncharacterized LOC100289333##AK313755|ZNF563|147837|zinc finger protein 563##BC022523|ZNF563|147837|zinc finger protein 563##AK092116|ZNF563|147837|zinc finger protein 563##NM_145276|ZNF563|147837|zinc finger protein 563##AK024418|ZNF442|79973|zinc finger protein 442##AK295923|ZNF442|79973|zinc finger protein 442##NM_030824|ZNF442|79973|zinc finger protein 442##NM_001080821|ZNF799|90576|zinc finger protein 799	0.0	
chr19	35838718	35838813	reg1034986.p2	3.832	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	-18674	+	NM_001199216 NM_002361 NM_080600 AK223562 BC093045 TSC_hg19_v1_chr19_+_35783063 BC034042 AK094545 AK222649 AK308976 M29273 AB209170 AK294644 AK222680 BC053347	-55723	+	AF309489 NM_021175 TSC_hg19_v1_chr19_+_35773430 AK096110 BC020612 AF131292 AY358669 AJ277280	-65340	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	3685	+	AK290710 NM_005304 BC035657	10729	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	101852	+	NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule##NM_001199216|MAG|4099|myelin associated glycoprotein##NM_002361|MAG|4099|myelin associated glycoprotein##NM_080600|MAG|4099|myelin associated glycoprotein##AK223562|MAG|4099|myelin associated glycoprotein##BC093045|MAG|4099|myelin associated glycoprotein##BC034042|MAG|4099|myelin associated glycoprotein##AK094545|MAG|4099|myelin associated glycoprotein##AK222649|MAG|4099|myelin associated glycoprotein##AK308976|MAG|4099|myelin associated glycoprotein##M29273|MAG|4099|myelin associated glycoprotein##AK294644|MAG|4099|myelin associated glycoprotein##AK222680|MAG|4099|myelin associated glycoprotein##BC053347|MAG|4099|myelin associated glycoprotein##AF309489|HAMP|57817|hepcidin antimicrobial peptide##NM_021175|HAMP|57817|hepcidin antimicrobial peptide##AK096110|HAMP|57817|hepcidin antimicrobial peptide##BC020612|HAMP|57817|hepcidin antimicrobial peptide##AF131292|HAMP|57817|hepcidin antimicrobial peptide##AY358669|HAMP|57817|hepcidin antimicrobial peptide##AJ277280|HAMP|57817|hepcidin antimicrobial peptide##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2	0.0	
chr2	61921716	61921854	reg1013317.p1	3.832	+	TSC_hg19_v1_chr2_-_61765394 BX647758 NM_003400	-156380	-	TSC_hg19_v1_chr2_-_61765383 BC032847 CR749840	-156406	-	TSC_hg19_v1_chr2_-_61765358 AL833550	-156430	-	BC107162 BC107163 AK310908 AB527366 AM392542 AM392832 AM393518 TSC_hg19_v1_chr2_-_62081180 BX648834 BX649029 AK023367 BC036448 NM_001201543 NM_032180	159378	-	U38846 EU446763 AB385091 TSC_hg19_v1_chr2_-_62115685 AK294665	193879	-	AK129860 TSC_hg19_v1_chr2_-_62115719 AK295330	193933	-	BX647758|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##NM_003400|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC032847|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##CR749840|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##AL833550|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC107162|FAM161A|84140|family with sequence similarity 161, member A##BC107163|FAM161A|84140|family with sequence similarity 161, member A##AK310908|FAM161A|84140|family with sequence similarity 161, member A##AM392542|FAM161A|84140|family with sequence similarity 161, member A##AM392832|FAM161A|84140|family with sequence similarity 161, member A##AM393518|FAM161A|84140|family with sequence similarity 161, member A##BX648834|FAM161A|84140|family with sequence similarity 161, member A##BX649029|FAM161A|84140|family with sequence similarity 161, member A##AK023367|FAM161A|84140|family with sequence similarity 161, member A##BC036448|FAM161A|84140|family with sequence similarity 161, member A##NM_001201543|FAM161A|84140|family with sequence similarity 161, member A##NM_032180|FAM161A|84140|family with sequence similarity 161, member A##U38846|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##EU446763|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK294665|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK129860|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK295330|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)	0.0	
chr3	50899752	50899903	reg1038985.p1	3.832	+	AY254099 NM_004947 AY145303	-187145	+	TSC_hg19_v1_chr3_+_50654932 AK313565 U43784 AB528893 EU832627 EU832702 CU675717 AB451303 AB451434	-244895	+	BC001662 BC010407 TSC_hg19_v1_chr3_+_50654611 BC007591 U09578	-245200	+	NM_006010 TSC_hg19_v1_chr3_+_51422691	522864	+	TSC_hg19_v1_chr3_+_51422721 BC113588 BC113590 AK292243 BC007282 BT007110 EU832655 EU832733 BC033055	522954	+	NM_013286 TSC_hg19_v1_chr3_+_51428706	528875	+	AY254099|DOCK3|1795|dedicator of cytokinesis 3##NM_004947|DOCK3|1795|dedicator of cytokinesis 3##AY145303|DOCK3|1795|dedicator of cytokinesis 3##AK313565|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U43784|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832627|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832702|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451303|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451434|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC001662|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC010407|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC007591|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U09578|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##NM_006010|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113588|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113590|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AK292243|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC007282|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BT007110|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832655|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832733|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC033055|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##NM_013286|RBM15B|29890|RNA binding motif protein 15B	0.175334	
chr4	40737386	40737461	reg1031898.p2	3.832	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-104716	-	TSC_hg19_v1_chr4_-_40631882 BC034402 BC071585 NM_001098634	-105558	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	-219465	-	BC042401 NM_024677 BC036568 AK024063	14523	+	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	121752	-	BC088372 TSC_hg19_v1_chr4_-_40936716	199255	-	AK304206|RBM47|54502|RNA binding motif protein 47##BC034402|RBM47|54502|RNA binding motif protein 47##BC071585|RBM47|54502|RNA binding motif protein 47##NM_001098634|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	0.038302	
chr5	130588792	130588972	reg1027938.p2	3.832	+	TSC_hg19_v1_chr5_+_130506676 BC037930 BC047079	-82211	+	AK000803 NM_181705 TSC_hg19_v1_chr5_+_130506648	-82239	+	TSC_hg19_v1_chr5_-_130501019 NM_005340	-87839	-	NM_001038702 NM_020240 TSC_hg19_v1_chr5_+_130599737	10839	+	TSC_hg19_v1_chr5_+_130599764 BC023555 BC050430	10874	+	AK312406 TSC_hg19_v1_chr5_+_130599768	10886	+	BC037930|LYRM7|90624|Lyrm7 homolog (mouse)##BC047079|LYRM7|90624|Lyrm7 homolog (mouse)##AK000803|LYRM7|90624|Lyrm7 homolog (mouse)##NM_181705|LYRM7|90624|Lyrm7 homolog (mouse)##NM_005340|HINT1|3094|histidine triad nucleotide binding protein 1##NM_001038702|CDC42SE2|56990|CDC42 small effector 2##NM_020240|CDC42SE2|56990|CDC42 small effector 2##BC023555|CDC42SE2|56990|CDC42 small effector 2##BC050430|CDC42SE2|56990|CDC42 small effector 2##AK312406|CDC42SE2|56990|CDC42 small effector 2	0.0	
chr7	138550786	138550882	reg1034210.p1	3.832	+	BC109304 BC109305 AF245517 AK292945 NM_020632 NM_130840	-67940	-	BC131697 AK055841 NM_001085429 BC058028	-68111	+	NM_130841	-92053	-	TSC_hg19_v1_chr7_-_138666114 AM989468 AM989469 AM989472 AM989473 AM989474 NM_001164665 NM_020910	115399	-	TSC_hg19_v1_chr7_-_138720787 BC008842 NM_080660 BC020784	170000	-	AK055851 BX647974 TSC_hg19_v1_chr7_-_138794101	243267	-	BC109304|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC109305|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AF245517|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AK292945|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_020632|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##NM_130840|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##BC131697|TMEM213|155006|transmembrane protein 213##AK055841|TMEM213|155006|transmembrane protein 213##NM_001085429|TMEM213|155006|transmembrane protein 213##BC058028|TMEM213|155006|transmembrane protein 213##NM_130841|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4##AM989468|KIAA1549|57670|KIAA1549##AM989469|KIAA1549|57670|KIAA1549##NM_001164665|KIAA1549|57670|KIAA1549##NM_020910|KIAA1549|57670|KIAA1549##BC008842|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##NM_080660|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##BC020784|ZC3HAV1L|92092|zinc finger CCCH-type, antiviral 1-like##AK055851|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1##BX647974|ZC3HAV1|56829|zinc finger CCCH-type, antiviral 1	0.574788	CTCF.p2:-3:0.575
chr8	103567831	103568011	reg1024122.p2	3.832	+	NM_024410 AK315276 BC104456 BC104457	-4060	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-143010	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-316748	-	BC011538 NM_001032282 S81439	98171	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	100011	-	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	308438	-	NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1	0.0	
chr11	33942867	33943004	reg1036553.p2	3.831	+	NM_005574 X61118	-29100	-	TSC_hg19_v1_chr11_-_33891485 NM_001142315	-51439	-	BC042426 TSC_hg19_v1_chr11_-_33891402 BC034041 NM_001142316	-51544	-	TSC_hg19_v1_chr11_+_34073238 BC001731 NM_005898 NM_203364	130278	+	TSC_hg19_v1_chr11_+_34073889 AK299720	130969	+	TSC_hg19_v1_chr11_+_34073950 Z48042	131002	+	NM_005574|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##X61118|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142315|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC042426|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC034041|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142316|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC001731|CAPRIN1|4076|cell cycle associated protein 1##NM_005898|CAPRIN1|4076|cell cycle associated protein 1##NM_203364|CAPRIN1|4076|cell cycle associated protein 1##AK299720|CAPRIN1|4076|cell cycle associated protein 1##Z48042|CAPRIN1|4076|cell cycle associated protein 1	0.0	
chr1	201278754	201278870	reg1038212.p1	3.831	+	NM_000299 NM_001005337 Z34974 AK315291 X79293 BC114571 BC115702	-26175	+	BC033185 NM_001164586	-118860	+	AK075335 AY138587 AK296307 TSC_hg19_v1_chr1_-_201123603 BC001106 AL136600 AK054883 AK303843 NM_016456	-155200	-	TSC_hg19_v1_chr1_-_201342319 X79855 X79856 X79858 CU678094 S64668 X74819 X79859	63568	-	TSC_hg19_v1_chr1_-_201346783 L40162 AY277394 X79861 BC002653	67976	-	NM_000364 NM_001001430 NM_001001431 NM_001001432 AK125236 TSC_hg19_v1_chr1_-_201346809 AK290621	68034	-	NM_000299|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##NM_001005337|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##Z34974|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##AK315291|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##X79293|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC114571|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC115702|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC033185|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##NM_001164586|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##AK075335|TMEM9|252839|transmembrane protein 9##AY138587|TMEM9|252839|transmembrane protein 9##AK296307|TMEM9|252839|transmembrane protein 9##BC001106|TMEM9|252839|transmembrane protein 9##AL136600|TMEM9|252839|transmembrane protein 9##AK054883|TMEM9|252839|transmembrane protein 9##AK303843|TMEM9|252839|transmembrane protein 9##NM_016456|TMEM9|252839|transmembrane protein 9##X79855|TNNT2|7139|troponin T type 2 (cardiac)##X79856|TNNT2|7139|troponin T type 2 (cardiac)##X79858|TNNT2|7139|troponin T type 2 (cardiac)##S64668|TNNT2|7139|troponin T type 2 (cardiac)##X74819|TNNT2|7139|troponin T type 2 (cardiac)##X79859|TNNT2|7139|troponin T type 2 (cardiac)##L40162|TNNT2|7139|troponin T type 2 (cardiac)##AY277394|TNNT2|7139|troponin T type 2 (cardiac)##X79861|TNNT2|7139|troponin T type 2 (cardiac)##BC002653|TNNT2|7139|troponin T type 2 (cardiac)##NM_000364|TNNT2|7139|troponin T type 2 (cardiac)##NM_001001430|TNNT2|7139|troponin T type 2 (cardiac)##NM_001001431|TNNT2|7139|troponin T type 2 (cardiac)##NM_001001432|TNNT2|7139|troponin T type 2 (cardiac)##AK125236|TNNT2|7139|troponin T type 2 (cardiac)##AK290621|TNNT2|7139|troponin T type 2 (cardiac)	0.049728	
chr13	42557876	42557953	reg1035904.p2	3.831	+	TSC_hg19_v1_chr13_-_42535247 AB590583 BC131802 BC053674 NM_001009814 NM_015058	-22725	-	TSC_hg19_v1_chr13_-_42535066 AK095155	-22834	-	TSC_hg19_v1_chr13_+_42031690 BC038706 AF036549	-526214	+	AK289546 NM_001204504	56257	+	NM_152910 NM_178009 AB078967 AB078968	64951	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	154296	+	BC131802|KIAA0564|23078|KIAA0564##BC053674|KIAA0564|23078|KIAA0564##NM_001009814|KIAA0564|23078|KIAA0564##NM_015058|KIAA0564|23078|KIAA0564##AK095155|KIAA0564|23078|KIAA0564##BC038706|C13orf15|28984|chromosome 13 open reading frame 15##AF036549|C13orf15|28984|chromosome 13 open reading frame 15##AK289546|DGKH|160851|diacylglycerol kinase, eta##NM_001204504|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta	0.0	
chr17	57903039	57903219	reg1029373.p1	3.831	+	TSC_hg19_v1_chr17_+_57785080 AK293664	-118056	+	AK294854 TSC_hg19_v1_chr17_+_57785025 AF214006 AX775965	-118094	+	BC009758 TSC_hg19_v1_chr17_+_57785014 AK024969	-118113	+	TSC_hg19_v1_chr17_+_57915291 AK310806	12177	+	AK024096 AK298492 AK301312 BC000258 AK022771 AK315172 NM_001193609 NM_001193610 NM_001193611 NM_001193612 NM_001193613 NM_016261	67062	-	NM_003161 BC036033 TSC_hg19_v1_chr17_+_57970481 AK293247	67333	+	AK293664|VMP1|81671|vacuole membrane protein 1##AK294854|VMP1|81671|vacuole membrane protein 1##AF214006|VMP1|81671|vacuole membrane protein 1##AX775965|VMP1|81671|vacuole membrane protein 1##BC009758|VMP1|81671|vacuole membrane protein 1##AK024969|VMP1|81671|vacuole membrane protein 1##AK024096|TUBD1|51174|tubulin, delta 1##AK298492|TUBD1|51174|tubulin, delta 1##AK301312|TUBD1|51174|tubulin, delta 1##BC000258|TUBD1|51174|tubulin, delta 1##AK022771|TUBD1|51174|tubulin, delta 1##AK315172|TUBD1|51174|tubulin, delta 1##NM_001193609|TUBD1|51174|tubulin, delta 1##NM_001193610|TUBD1|51174|tubulin, delta 1##NM_001193611|TUBD1|51174|tubulin, delta 1##NM_001193612|TUBD1|51174|tubulin, delta 1##NM_001193613|TUBD1|51174|tubulin, delta 1##NM_016261|TUBD1|51174|tubulin, delta 1##NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	0.0	
chr19	43443051	43443137	reg1035620.p1	3.831	+	BC136401 U18467 BC030979 AK309898 NM_001206650 NM_002783	-1805	-	CU676604 DQ893114 DQ896388 M31125 M33666 NM_002782 X17098 BC020652 NM_001031850	-21101	-	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	-59269	-	CU676656 M69245 U25988 BC020711 NM_001113410 NM_002785 NM_203287	87492	-	DQ891359 EU832659 EU832736 M20882 AK002132 BC022316 NM_031246	143713	-	AB527988 EU831982 EU832075 M73713 M25384 BC012607 NM_001130014 NM_002781	247528	-	BC136401|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##U18467|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##BC030979|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_001206650|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_002783|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##DQ893114|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##DQ896388|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M31125|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M33666|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_002782|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##X17098|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC020652|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_001031850|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M69245|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##U25988|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##BC020711|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_001113410|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_002785|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_203287|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##DQ891359|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832659|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832736|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M20882|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##BC022316|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##NM_031246|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU831982|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##EU832075|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M73713|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M25384|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##BC012607|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_001130014|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_002781|PSG5|5673|pregnancy specific beta-1-glycoprotein 5	0.464548	CTCF.p2:-8:0.465
chr19	45757324	45757440	reg1023659.p2	3.831	+	TSC_hg19_v1_chr19_+_45754571 BC071948 AK075272 AY057448 AB058763 AY120867	-2684	+	TSC_hg19_v1_chr19_+_45754522 NM_001199867 NM_031417 AB049127 AB088047	-2855	+	AK225791 AK093466 AX748143 NM_138568	-19915	-	TSC_hg19_v1_chr19_-_45822843 BT006793 DQ890539 DQ893701	65526	-	AK297900 AK129878 AK300730 AK313281 BC007462 TSC_hg19_v1_chr19_-_45826134 M14780	68752	-	NM_001824 TSC_hg19_v1_chr19_-_45826232	68850	-	BC071948|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AK075272|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AY057448|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AB058763|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AY120867|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##NM_001199867|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##NM_031417|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AB049127|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AB088047|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AK225791|EXOC3L2|90332|exocyst complex component 3-like 2##AK093466|EXOC3L2|90332|exocyst complex component 3-like 2##NM_138568|EXOC3L2|90332|exocyst complex component 3-like 2##BT006793|CKM|1158|creatine kinase, muscle##DQ890539|CKM|1158|creatine kinase, muscle##DQ893701|CKM|1158|creatine kinase, muscle##AK129878|CKM|1158|creatine kinase, muscle##AK300730|CKM|1158|creatine kinase, muscle##AK313281|CKM|1158|creatine kinase, muscle##BC007462|CKM|1158|creatine kinase, muscle##M14780|CKM|1158|creatine kinase, muscle##NM_001824|CKM|1158|creatine kinase, muscle	0.046688	
chr2	113540193	113540365	reg1026625.p2	3.831	+	TSC_hg19_v1_chr2_-_113522187 AK316241 BC036217 AK097948 AK302875 AL832036 AK292530 NM_152515	-18057	-	NM_005415 AK312738 TSC_hg19_v1_chr2_+_113403515 BC019944 L20859	-136759	+	AK096990 TSC_hg19_v1_chr2_+_113342182	-198090	+	NM_000575 BC035169	2693	-	X56087 X02532 K02770 M54933 TSC_hg19_v1_chr2_-_113594357 AK313983 BC008678 M15330 NM_000576	54065	-	AF167368 AF200496 NM_014439 NM_173202 NM_173203 NM_173204 BC020637 AB451333 AB451478 AB590279 AF251119 AF251120 AY071840 AY071841 CU676594 DQ891388	130289	+	AK316241|CKAP2L|150468|cytoskeleton associated protein 2-like##BC036217|CKAP2L|150468|cytoskeleton associated protein 2-like##AK097948|CKAP2L|150468|cytoskeleton associated protein 2-like##AK302875|CKAP2L|150468|cytoskeleton associated protein 2-like##AL832036|CKAP2L|150468|cytoskeleton associated protein 2-like##AK292530|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_152515|CKAP2L|150468|cytoskeleton associated protein 2-like##NM_005415|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK312738|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##BC019944|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##L20859|SLC20A1|6574|solute carrier family 20 (phosphate transporter), member 1##AK096990|CHCHD5|84269|coiled-coil-helix-coiled-coil-helix domain containing 5##NM_000575|IL1A|3552|interleukin 1, alpha##BC035169|IL1A|3552|interleukin 1, alpha##X56087|IL1B|3553|interleukin 1, beta##X02532|IL1B|3553|interleukin 1, beta##K02770|IL1B|3553|interleukin 1, beta##M54933|IL1B|3553|interleukin 1, beta##AK313983|IL1B|3553|interleukin 1, beta##BC008678|IL1B|3553|interleukin 1, beta##M15330|IL1B|3553|interleukin 1, beta##NM_000576|IL1B|3553|interleukin 1, beta##AF167368|IL37|27178|interleukin 37##AF200496|IL37|27178|interleukin 37##NM_014439|IL37|27178|interleukin 37##NM_173202|IL37|27178|interleukin 37##NM_173203|IL37|27178|interleukin 37##NM_173204|IL37|27178|interleukin 37##BC020637|IL37|27178|interleukin 37##AB451333|IL37|27178|interleukin 37##AB451478|IL37|27178|interleukin 37##AF251119|IL37|27178|interleukin 37##AF251120|IL37|27178|interleukin 37##AY071840|IL37|27178|interleukin 37##AY071841|IL37|27178|interleukin 37##DQ891388|IL37|27178|interleukin 37	0.0	
chr2	24583423	24583600	reg1033311.p1	3.831	+	TSC_hg19_v1_chr2_-_24583385 AB033082 BC146779 AF182198 AF182199 BC038963 NM_006277 NM_019595 NM_147152	-31	-	BC050462 NM_001040710	-185540	+	TSC_hg19_v1_chr2_+_24346339 NM_001145710	-237152	+	NM_003743 NM_147223 NM_147233 AJ000881 AJ000882 U59302	223866	+	TSC_hg19_v1_chr2_-_25016225 CU687260 BC073803 NM_001013663	432727	-	NM_001199803 AK027859 TSC_hg19_v1_chr2_+_25016332 NM_024322 BC002870 AK315483	432760	+	AB033082|ITSN2|50618|intersectin 2##BC146779|ITSN2|50618|intersectin 2##AF182198|ITSN2|50618|intersectin 2##AF182199|ITSN2|50618|intersectin 2##BC038963|ITSN2|50618|intersectin 2##NM_006277|ITSN2|50618|intersectin 2##NM_019595|ITSN2|50618|intersectin 2##NM_147152|ITSN2|50618|intersectin 2##BC050462|C2orf84|653140|chromosome 2 open reading frame 84##NM_001040710|C2orf84|653140|chromosome 2 open reading frame 84##NM_001145710|LOC375190|375190|UPF0638 protein B##NM_003743|NCOA1|8648|nuclear receptor coactivator 1##NM_147223|NCOA1|8648|nuclear receptor coactivator 1##NM_147233|NCOA1|8648|nuclear receptor coactivator 1##AJ000881|NCOA1|8648|nuclear receptor coactivator 1##AJ000882|NCOA1|8648|nuclear receptor coactivator 1##U59302|NCOA1|8648|nuclear receptor coactivator 1##BC073803|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001013663|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001199803|CENPO|79172|centromere protein O##AK027859|CENPO|79172|centromere protein O##NM_024322|CENPO|79172|centromere protein O##BC002870|CENPO|79172|centromere protein O##AK315483|CENPO|79172|centromere protein O	0.024997	
chr2	75708177	75708299	reg1035988.p1	3.831	+	AK289765 NM_001058 NM_015727	-281610	-	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-522453	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-645987	-	BC016157 TSC_hg19_v1_chr2_-_75788066	79809	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	79852	-	AK023453 NM_032181	88609	-	AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A	0.0	
chr3	134616751	134616886	reg1032738.p1	3.831	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-102517	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-102667	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-246973	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	1067713	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	1067802	+	NM_181897 AK316258 L12146	1124800	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.022459	
chr5	94244745	94244845	reg1035362.p1	3.831	+	AK025997 TSC_hg19_v1_chr5_-_94224607	-20189	-	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	-290422	+	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	-290538	-	AY656716 AK058012 BC030005 AK057694 TSC_hg19_v1_chr5_-_94417350	172473	-	NM_001002796	172749	-	TSC_hg19_v1_chr5_-_94620306 AY656715 NM_024717	375498	-	AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1##BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1##AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1##BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1##AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_001002796|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656715|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_024717|MCTP1|79772|multiple C2 domains, transmembrane 1	0.991801	CTCF.p2:-8:0.992
chr6	165463017	165463124	reg1033770.p2	3.831	+	AL050218 TSC_hg19_v1_chr6_+_163984651	-1478457	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	-1626838	+	TSC_hg19_v1_chr6_+_163835795 AF272349	-1627280	+	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	260022	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	612626	-	AY203946 TSC_hg19_v1_chr6_-_166076051	612982	-	AL050218|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##AY203946|LOC100132188|100132188|LP7097	0.99719	CTCF.p2:18:0.997
chr6	88442102	88442283	reg1035520.p2	3.831	+	AK001204 NM_018064 TSC_hg19_v1_chr6_-_88411988	-30204	-	TSC_hg19_v1_chr6_-_88411949 AK222701	-30244	-	TSC_hg19_v1_chr6_-_88411885 BC000764 BC003042	-30283	-	BC029488 NM_030960 AF203447	315338	+	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	412844	-	NM_001160226 NM_001160258 NM_001160259 NM_016083	433574	-	AK001204|AKIRIN2|55122|akirin 2##NM_018064|AKIRIN2|55122|akirin 2##AK222701|AKIRIN2|55122|akirin 2##BC000764|AKIRIN2|55122|akirin 2##BC003042|AKIRIN2|55122|akirin 2##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)	0.029505	
chr6_mann_hap4	1798054	1798150	reg1033969.p1	3.831	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.01334	
chr7	4784591	4784727	reg1026019.p1	3.831	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	-62408	+	TSC_hg19_v1_chr7_+_4721925 NM_001037165	-62821	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	-1443660	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	30602	+	TSC_hg19_v1_chr7_+_4815296 AB007875	30627	+	DQ891226 DQ894411 AF218840 BC036653 NM_020144 TSC_hg19_v1_chr7_-_4901662 AK312788	116890	-	AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##NM_001037165|FOXK1|221937|forkhead box K1##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415##AB007875|KIAA0415|9907|KIAA0415##DQ891226|PAPOLB|56903|poly(A) polymerase beta (testis specific)##DQ894411|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AF218840|PAPOLB|56903|poly(A) polymerase beta (testis specific)##BC036653|PAPOLB|56903|poly(A) polymerase beta (testis specific)##NM_020144|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AK312788|PAPOLB|56903|poly(A) polymerase beta (testis specific)	0.0	
chr11	15298312	15298432	reg1035715.p1	3.830	+	AB236158 NM_001042536	-161889	+	AB236159 NM_001031853	-164403	+	BC008428 AK291188 BC092468 NM_000728	-203246	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	1126029	-	BC037866 NM_001145811	1132055	-	AF309034 NM_033326	1199553	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	0.052548	
chr11	59381881	59381952	reg1032401.p1	3.830	+	NM_001004711	-99531	+	NM_001004706	-110868	+	BC136893 BC136894 NM_001004705	-137043	+	TSC_hg19_v1_chr11_-_59383172 BC051350 BC063121	1253	-	TSC_hg19_v1_chr11_-_59383232 BC011581	1294	-	AF185696 M86917 NM_002556	1700	-	NM_001004711|OR4D9|390199|olfactory receptor, family 4, subfamily D, member 9##NM_001004706|OR4D11|219986|olfactory receptor, family 4, subfamily D, member 11##BC136893|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##BC136894|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##NM_001004705|OR4D10|390197|olfactory receptor, family 4, subfamily D, member 10##BC051350|OSBP|5007|oxysterol binding protein##BC063121|OSBP|5007|oxysterol binding protein##BC011581|OSBP|5007|oxysterol binding protein##AF185696|OSBP|5007|oxysterol binding protein##M86917|OSBP|5007|oxysterol binding protein##NM_002556|OSBP|5007|oxysterol binding protein	0.0	
chr11	7535814	7535880	reg1036841.p2	3.830	+	TSC_hg19_v1_chr11_+_7535229 AK001131 AK308398	-604	+	NM_003621 BC021714 TSC_hg19_v1_chr11_+_7535171	-744	+	NM_198474 BX647908 BC092488 TSC_hg19_v1_chr11_+_7506763 AK298137 BC035895 AK297778	-29130	+	AK296718 TSC_hg19_v1_chr11_+_7618421	82571	+	AB209000 BC001346 AF169802 NM_016229	158905	-	NM_198185	192093	-	AK001131|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AK308398|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##NM_003621|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##BC021714|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##NM_198474|OLFML1|283298|olfactomedin-like 1##BX647908|OLFML1|283298|olfactomedin-like 1##BC092488|OLFML1|283298|olfactomedin-like 1##AK298137|OLFML1|283298|olfactomedin-like 1##BC035895|OLFML1|283298|olfactomedin-like 1##AK297778|OLFML1|283298|olfactomedin-like 1##AK296718|PPFIBP2|8495|PTPRF interacting protein, binding protein 2 (liprin beta 2)##AB209000|CYB5R2|51700|cytochrome b5 reductase 2##BC001346|CYB5R2|51700|cytochrome b5 reductase 2##AF169802|CYB5R2|51700|cytochrome b5 reductase 2##NM_016229|CYB5R2|51700|cytochrome b5 reductase 2##NM_198185|OVCH2|341277|ovochymase 2 (gene/pseudogene)	0.0	
chr1	20616147	20616214	reg1041873.p2	3.830	+	BC047428 NM_152376 BX648631 AK058158 TSC_hg19_v1_chr1_+_20512591	-103596	+	NM_001105572	-114494	-	TSC_hg19_v1_chr1_+_20480706 BC041651	-135417	+	NM_001039500 AK125833	1240	+	AY204901 TSC_hg19_v1_chr1_-_20812323	196118	-	NM_018584 TSC_hg19_v1_chr1_-_20812743	196601	-	BC047428|UBXN10|127733|UBX domain protein 10##NM_152376|UBXN10|127733|UBX domain protein 10##BX648631|UBXN10|127733|UBX domain protein 10##AK058158|UBXN10|127733|UBX domain protein 10##NM_001105572|PLA2G2C|391013|phospholipase A2, group IIC##NM_001039500|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AK125833|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AY204901|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1##NM_018584|CAMK2N1|55450|calcium/calmodulin-dependent protein kinase II inhibitor 1	0.0	
chr1	33551887	33552067	reg1006654.p1	3.830	+	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	-5244	+	TSC_hg19_v1_chr1_-_33502485 NM_001199199 NM_001625 NM_013411	-49477	-	AB005622 TSC_hg19_v1_chr1_-_33502470	-49502	-	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	95671	-	TSC_hg19_v1_chr1_+_33722167 NM_152493	170188	+	TSC_hg19_v1_chr1_-_33813262 AK055807	261319	-	BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##NM_001199199|AK2|204|adenylate kinase 2##NM_001625|AK2|204|adenylate kinase 2##NM_013411|AK2|204|adenylate kinase 2##AB005622|AK2|204|adenylate kinase 2##AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##NM_152493|ZNF362|149076|zinc finger protein 362	0.0	
chr16	27590212	27590316	reg1039556.p1	3.830	+	TSC_hg19_v1_chr16_+_27561464 NM_015202 AB011128 BC150276 BC131508	-28800	+	TSC_hg19_v1_chr16_-_27561248 NM_001520 U02619	-28995	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	-29033	-	BC016460 NM_144675	309213	-	TSC_hg19_v1_chr16_-_28074776 AY358206 NM_001109763	484538	-	AY026388 BC130304 BC144189 TSC_hg19_v1_chr16_-_28222816 AK123846	632521	-	NM_015202|KIAA0556|23247|KIAA0556##AB011128|KIAA0556|23247|KIAA0556##BC150276|KIAA0556|23247|KIAA0556##BC131508|KIAA0556|23247|KIAA0556##NM_001520|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##U02619|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC016460|GSG1L|146395|GSG1-like##NM_144675|GSG1L|146395|GSG1-like##AY358206|GSG1L|146395|GSG1-like##NM_001109763|GSG1L|146395|GSG1-like##AY026388|XPO6|23214|exportin 6##BC130304|XPO6|23214|exportin 6##BC144189|XPO6|23214|exportin 6##AK123846|XPO6|23214|exportin 6	0.0	
chr16	68783601	68783694	reg1032966.p2	3.830	+	TSC_hg19_v1_chr16_+_68771304 Z18923	-12336	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	-12402	+	BC144283 TSC_hg19_v1_chr16_+_68771216 AK290012 Z13009	-12428	+	TSC_hg19_v1_chr16_+_68877504 BC092500 AB051533 NM_024562 AB463318	93858	+	AK291400 NM_001199280	355819	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	356493	+	Z18923|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC144283|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK290012|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##Z13009|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##BC092500|TMCO7|79613|transmembrane and coiled-coil domains 7##AB051533|TMCO7|79613|transmembrane and coiled-coil domains 7##NM_024562|TMCO7|79613|transmembrane and coiled-coil domains 7##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3	0.510312	CTCF.p2:-22:0.510
chr2	181971561	181971657	reg1021173.p1	3.830	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-125782	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-125966	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-126239	+	NM_000885	350009	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	350441	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	350713	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.0	
chr22	21597260	21597371	reg1033001.p1	3.830	+	BC062565 AJ000730 BC008814 NM_004173 TSC_hg19_v1_chr22_-_21386851	-210464	-	BC064805 NM_001159554 AB002058 CR456535 BC109209 AB528202 CU013135 CU013423 AK309079 NM_005446 BC047287 BC063553 BC033488	-227855	+	TSC_hg19_v1_chr22_+_21356508 AK096901 BC065749	-240834	+	NM_001128633	140347	+	NM_001128635	140724	+	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	174361	+	BC062565|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AJ000730|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC008814|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_004173|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC064805|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_001159554|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AB002058|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CR456535|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC109209|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013135|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013423|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK309079|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_005446|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC047287|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC063553|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC033488|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK096901|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##BC065749|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2	0.999549	CTCF.p2:16:1.000
chr4	26733162	26733261	reg1034615.p2	3.830	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-147531	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-241226	-	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	-410529	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	129329	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3988788	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3988983	+	NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7	0.0	
chr5	142149913	142150014	reg1034879.p1	3.830	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-72392	-	M74028 NM_033136 AK312301	-83938	-	M60516 NM_000800	-84344	-	TSC_hg19_v1_chr5_+_142149971 BC068555	9	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	345	+	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	632860	-	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##M74028|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033136|FGF1|2246|fibroblast growth factor 1 (acidic)##AK312301|FGF1|2246|fibroblast growth factor 1 (acidic)##M60516|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr5	38673821	38673952	reg1039727.p1	3.830	+	AK308158 AK309882 NM_002310	-78380	-	TSC_hg19_v1_chr5_-_38556749 AK290059 NM_001127671	-117158	-	NM_182801 BC033177 AK092994 AX747843 BC033188	-228262	+	NM_001168355 TSC_hg19_v1_chr5_+_38845959	172073	+	TSC_hg19_v1_chr5_+_38846113 NM_003999 BC010943 U60805 AK304016 BC063468	172188	+	TSC_hg19_v1_chr5_+_38846260 BC125209 BC125210	172409	+	AK308158|LIFR|3977|leukemia inhibitory factor receptor alpha##AK309882|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_002310|LIFR|3977|leukemia inhibitory factor receptor alpha##AK290059|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_001127671|LIFR|3977|leukemia inhibitory factor receptor alpha##NM_182801|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033177|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##AK092994|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##BC033188|EGFLAM|133584|EGF-like, fibronectin type III and laminin G domains##NM_001168355|OSMR|9180|oncostatin M receptor##NM_003999|OSMR|9180|oncostatin M receptor##BC010943|OSMR|9180|oncostatin M receptor##U60805|OSMR|9180|oncostatin M receptor##AK304016|OSMR|9180|oncostatin M receptor##BC063468|OSMR|9180|oncostatin M receptor##BC125209|OSMR|9180|oncostatin M receptor##BC125210|OSMR|9180|oncostatin M receptor	0.146624	
chr6	3024144	3024316	reg1029482.p2	3.830	+	TSC_hg19_v1_chr6_+_3000111 NM_000904 AK311746 AK056981 J02888	-24102	+	AK094983 NM_001195291 NM_004568	-51832	-	TSC_hg19_v1_chr6_-_2971981 AK314578	-52181	-	AK314176 TSC_hg19_v1_chr6_+_3064200 AB208926	39936	+	BC126254 BC126256 HQ258488 NM_003804 U50062 AK304701	52834	+	TSC_hg19_v1_chr6_+_3118961 AK297518 NM_004332 AK314909 AL832502 AJ617684 X81372	94721	+	NM_000904|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK311746|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK056981|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##J02888|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK094983|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_001195291|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_004568|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314578|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##AK314176|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AB208926|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK297518|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##NM_004332|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AK314909|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AL832502|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AJ617684|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##X81372|BPHL|670|biphenyl hydrolase-like (serine hydrolase)	0.0	
chr6_cox_hap2	4660025	4660107	reg1030529.p1	3.830	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.960769	CTCF.p2:8:0.961
chr8	95961814	95961994	reg1031826.p1	3.830	+	TSC_hg19_v1_chr8_-_95961604 AK315071 AF409114 AF409115 AK125880 NM_001135733 NM_033285	-247	-	TSC_hg19_v1_chr8_-_95907430 BC007015 BC020729 NM_057749	-54452	-	TSC_hg19_v1_chr8_+_95835588 BC136754 BC144396 BC144397	-126204	+	TSC_hg19_v1_chr8_+_96037224 NM_152416 BC028166 DQ891641 DQ894830 AK298631 AK301414	75400	+	TSC_hg19_v1_chr8_+_96145948 NM_024613	184041	+	TSC_hg19_v1_chr8_+_96146012 AL834473 BC011806	184104	+	AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##BC007015|CCNE2|9134|cyclin E2##BC020729|CCNE2|9134|cyclin E2##NM_057749|CCNE2|9134|cyclin E2##BC136754|INTS8|55656|integrator complex subunit 8##BC144396|INTS8|55656|integrator complex subunit 8##BC144397|INTS8|55656|integrator complex subunit 8##NM_152416|C8orf38|137682|chromosome 8 open reading frame 38##BC028166|C8orf38|137682|chromosome 8 open reading frame 38##DQ891641|C8orf38|137682|chromosome 8 open reading frame 38##DQ894830|C8orf38|137682|chromosome 8 open reading frame 38##AK298631|C8orf38|137682|chromosome 8 open reading frame 38##AK301414|C8orf38|137682|chromosome 8 open reading frame 38##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##AL834473|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC011806|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2	0.0	
chr1	161337721	161337822	reg1037972.p1	3.829	+	NM_001013625	-108	-	NM_001035511 NM_001035512 NM_001035513 NM_003001 TSC_hg19_v1_chr1_+_161284170 AK131051 AK293687 AK294305 BC020808 BC066329 U57877 AB211234 AB211235 AB201252 AB212048 BC012735 BC033626 D49737	-53592	+	BT006765 DQ895885 EU176378 S66705 D10537 BC006491 AK313555 TSC_hg19_v1_chr1_-_161279760 NM_000530	-58029	-	TSC_hg19_v1_chr1_+_161475246 NM_001136219 NM_021642 BC019931 AK226059 AK225438 AK298657 AK315225 Y00644 AK225601 M31932 CU676732 AK298734 BC020823 AB529040 DQ892037 DQ895228 J03619 M28697 X62572	137464	+	NM_002155	156264	+	CU676090 CU689692 AK223268 TSC_hg19_v1_chr1_-_161519555 BC033678 AK223295 X52645 AB528616 CU691394	181808	-	NM_001013625|C1orf192|257177|chromosome 1 open reading frame 192##NM_001035511|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001035512|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_001035513|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##NM_003001|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK131051|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK293687|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AK294305|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC020808|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC066329|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##U57877|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB211234|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB211235|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB201252|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##AB212048|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC012735|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BC033626|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##D49737|SDHC|6391|succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa##BT006765|MPZ|4359|myelin protein zero##DQ895885|MPZ|4359|myelin protein zero##EU176378|MPZ|4359|myelin protein zero##S66705|MPZ|4359|myelin protein zero##D10537|MPZ|4359|myelin protein zero##BC006491|MPZ|4359|myelin protein zero##AK313555|MPZ|4359|myelin protein zero##NM_000530|MPZ|4359|myelin protein zero##NM_001136219|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##NM_021642|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##BC019931|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK226059|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK225438|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK298657|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK315225|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##Y00644|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK225601|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##M31932|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##AK298734|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##BC020823|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##DQ892037|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##DQ895228|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##J03619|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##M28697|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##X62572|FCGR2A|2212|Fc fragment of IgG, low affinity IIa, receptor (CD32)##NM_002155|HSPA6|3310|heat shock 70kDa protein 6 (HSP70B')##AK223268|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##BC033678|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK223295|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##X52645|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)	0.0	
chr12	262317	262391	reg1017932.p1	3.829	+	AK091953 AX747275 NM_015232	-75813	+	TSC_hg19_v1_chr12_+_175945 BC024764 NM_001170738	-86394	+	None	None	None	NM_003044 BC036838 BC026339 NM_001122847	60383	-	AK307167 AK313690 NM_001122848 NM_001206931	60958	-	AK313511 AF462445 AK295904 AK296127 AK296209 BC020867 BC022392 NM_001190997 NM_001243392 NM_016615	109662	-	AK091953|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_015232|IQSEC3|440073|IQ motif and Sec7 domain 3##BC024764|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_001170738|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_003044|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC036838|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC026339|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001122847|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK307167|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK313690|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001122848|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001206931|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK313511|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AF462445|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK295904|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK296127|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK296209|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##BC020867|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##BC022392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_001190997|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_001243392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_016615|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	0.0	
chr1	248100601	248100668	reg1000173.p2	3.829	+	BC028158 NM_175911	-142	+	NM_001005522	-16315	+	BC146848 EU831764 EU831842 NM_001001957	-41762	+	BC140751 NM_001001963	11484	+	BC136816 NM_001004491	27949	+	BC104792 BC104794 NM_001004686	100839	+	BC028158|OR2L13|284521|olfactory receptor, family 2, subfamily L, member 13##NM_175911|OR2L13|284521|olfactory receptor, family 2, subfamily L, member 13##NM_001005522|OR2T8|343172|olfactory receptor, family 2, subfamily T, member 8##BC146848|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3##EU831764|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3##EU831842|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3##NM_001001957|OR2W3|343171|olfactory receptor, family 2, subfamily W, member 3##BC140751|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8##NM_001001963|OR2L8|391190|olfactory receptor, family 2, subfamily L, member 8##BC136816|OR2AK2|391191|olfactory receptor, family 2, subfamily AK, member 2##NM_001004491|OR2AK2|391191|olfactory receptor, family 2, subfamily AK, member 2##BC104792|OR2L2|26246|olfactory receptor, family 2, subfamily L, member 2##BC104794|OR2L2|26246|olfactory receptor, family 2, subfamily L, member 2##NM_001004686|OR2L2|26246|olfactory receptor, family 2, subfamily L, member 2	0.0	
chr16	85922531	85922712	reg1032136.p1	3.829	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-89286	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-89316	+	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	-89388	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	10165	+	TSC_hg19_v1_chr16_-_86542463 AK091834	619843	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	621535	+	BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1	0.014269	
chr17	33815375	33815478	reg1039103.p1	3.829	+	NM_001195790	-669	-	TSC_hg19_v1_chr17_-_33775787 CR749630 AK056514 AL832726 AK122750 NM_144682	-39615	-	AK001122 BC035605 NM_018042	-55896	-	BC140847 BC157877 BC157879 NM_001129820	69681	-	BC031085 AK312635 BC015751 U91521 NM_000286	90179	-	TSC_hg19_v1_chr17_+_33914281 NM_001030006 NM_001282 M34175 AK295667	98864	+	NM_001195790|SLFN12L|100506736|schlafen family member 12-like##CR749630|SLFN13|146857|schlafen family member 13##AK056514|SLFN13|146857|schlafen family member 13##AL832726|SLFN13|146857|schlafen family member 13##AK122750|SLFN13|146857|schlafen family member 13##NM_144682|SLFN13|146857|schlafen family member 13##AK001122|SLFN12|55106|schlafen family member 12##BC035605|SLFN12|55106|schlafen family member 12##NM_018042|SLFN12|55106|schlafen family member 12##BC140847|SLFN14|342618|schlafen family member 14##BC157877|SLFN14|342618|schlafen family member 14##BC157879|SLFN14|342618|schlafen family member 14##NM_001129820|SLFN14|342618|schlafen family member 14##BC031085|PEX12|5193|peroxisomal biogenesis factor 12##AK312635|PEX12|5193|peroxisomal biogenesis factor 12##BC015751|PEX12|5193|peroxisomal biogenesis factor 12##U91521|PEX12|5193|peroxisomal biogenesis factor 12##NM_000286|PEX12|5193|peroxisomal biogenesis factor 12##NM_001030006|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##NM_001282|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##M34175|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit##AK295667|AP2B1|163|adaptor-related protein complex 2, beta 1 subunit	0.0	
chr19	11784425	11784564	reg1034366.p1	3.829	+	NM_145295 BC098416 AK095639 BC006279 AK074846 BC069232	-76203	+	BC111014 TSC_hg19_v1_chr19_-_11689776 AK307164 NM_001111035 NM_001111036	-94712	-	AK225912 NM_001111034	-94903	-	X51760 BC052597 AK308189 NM_001080493 AK300579 AK303213	65264	-	NM_152355 TSC_hg19_v1_chr19_+_11877884 AK095956	93366	+	AK297479 NM_152356 AK096593	124885	+	NM_145295|ZNF627|199692|zinc finger protein 627##BC098416|ZNF627|199692|zinc finger protein 627##AK095639|ZNF627|199692|zinc finger protein 627##BC006279|ZNF627|199692|zinc finger protein 627##AK074846|ZNF627|199692|zinc finger protein 627##BC069232|ZNF627|199692|zinc finger protein 627##BC111014|ACP5|54|acid phosphatase 5, tartrate resistant##AK307164|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111035|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111036|ACP5|54|acid phosphatase 5, tartrate resistant##AK225912|ACP5|54|acid phosphatase 5, tartrate resistant##NM_001111034|ACP5|54|acid phosphatase 5, tartrate resistant##X51760|ZNF823|55552|zinc finger protein 823##BC052597|ZNF823|55552|zinc finger protein 823##AK308189|ZNF823|55552|zinc finger protein 823##NM_001080493|ZNF823|55552|zinc finger protein 823##AK300579|ZNF823|55552|zinc finger protein 823##AK303213|ZNF823|55552|zinc finger protein 823##NM_152355|ZNF441|126068|zinc finger protein 441##AK095956|ZNF441|126068|zinc finger protein 441##AK297479|ZNF491|126069|zinc finger protein 491##NM_152356|ZNF491|126069|zinc finger protein 491##AK096593|ZNF491|126069|zinc finger protein 491	0.988195	CTCF.p2:14:0.988
chr20	10651333	10651513	reg1027403.p1	3.829	+	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-235447	+	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	-236584	-	AF221993 NM_018848	-238854	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	2781	-	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	3146	-	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1220026	+	BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3	0.0	
chr4	17563906	17563998	reg1034134.p2	3.829	+	BC127863 NM_001079827	-47165	+	AB528218 AM393718 DQ891926 DQ895113 CU674280 TSC_hg19_v1_chr4_-_17513714 X04882 BC000576 AK124382 AK296622 AK223437 AK289773 NM_000320	-50186	-	AF052389 TSC_hg19_v1_chr4_-_16900372 NM_001130834 NM_001290	-663567	-	TSC_hg19_v1_chr4_+_17578852 NM_015907	14930	+	TSC_hg19_v1_chr4_+_17579057 BC065564 CR457128 AK022055	15124	+	TSC_hg19_v1_chr4_+_17579121 AK298613 AK307723 AK225511 BC006199 AK298790	15178	+	BC127863|CLRN2|645104|clarin 2##NM_001079827|CLRN2|645104|clarin 2##AM393718|QDPR|5860|quinoid dihydropteridine reductase##DQ891926|QDPR|5860|quinoid dihydropteridine reductase##DQ895113|QDPR|5860|quinoid dihydropteridine reductase##X04882|QDPR|5860|quinoid dihydropteridine reductase##BC000576|QDPR|5860|quinoid dihydropteridine reductase##AK124382|QDPR|5860|quinoid dihydropteridine reductase##AK296622|QDPR|5860|quinoid dihydropteridine reductase##AK223437|QDPR|5860|quinoid dihydropteridine reductase##AK289773|QDPR|5860|quinoid dihydropteridine reductase##NM_000320|QDPR|5860|quinoid dihydropteridine reductase##AF052389|LDB2|9079|LIM domain binding 2##NM_001130834|LDB2|9079|LIM domain binding 2##NM_001290|LDB2|9079|LIM domain binding 2##NM_015907|LAP3|51056|leucine aminopeptidase 3##BC065564|LAP3|51056|leucine aminopeptidase 3##CR457128|LAP3|51056|leucine aminopeptidase 3##AK022055|LAP3|51056|leucine aminopeptidase 3##AK298613|LAP3|51056|leucine aminopeptidase 3##AK307723|LAP3|51056|leucine aminopeptidase 3##AK225511|LAP3|51056|leucine aminopeptidase 3##BC006199|LAP3|51056|leucine aminopeptidase 3##AK298790|LAP3|51056|leucine aminopeptidase 3	0.921333	CTCF.p2:12:0.921
chr6	153269269	153269449	reg1012494.p1	3.829	+	AK313950 BC009794 NM_003381 NM_194435 AK291959 M36634	-197373	+	NM_025107 AF527367 AK024922 BC128463 BC128464 GU997693 AK021612 BC022556 AL834500 CU692694	-250254	+	AF495910 NM_182961	-310826	-	AY079515 DQ891922 DQ895106 BC018905 AF129535 TSC_hg19_v1_chr6_-_153304175 AK026197 AK314456 NM_012177	34788	-	AJ420499 TSC_hg19_v1_chr6_-_153304715 AK055221 NM_001142522	35305	-	TSC_hg19_v1_chr6_-_153323825 AK027684 CU676987 CU680090 AK001037 AK225321 AK225970 AK290662 BC014428	54453	-	AK313950|VIP|7432|vasoactive intestinal peptide##BC009794|VIP|7432|vasoactive intestinal peptide##NM_003381|VIP|7432|vasoactive intestinal peptide##NM_194435|VIP|7432|vasoactive intestinal peptide##AK291959|VIP|7432|vasoactive intestinal peptide##M36634|VIP|7432|vasoactive intestinal peptide##NM_025107|MYCT1|80177|myc target 1##AF527367|MYCT1|80177|myc target 1##AK024922|MYCT1|80177|myc target 1##BC128463|MYCT1|80177|myc target 1##BC128464|MYCT1|80177|myc target 1##GU997693|MYCT1|80177|myc target 1##AK021612|MYCT1|80177|myc target 1##BC022556|MYCT1|80177|myc target 1##AL834500|MYCT1|80177|myc target 1##AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AY079515|FBXO5|26271|F-box protein 5##DQ891922|FBXO5|26271|F-box protein 5##DQ895106|FBXO5|26271|F-box protein 5##BC018905|FBXO5|26271|F-box protein 5##AF129535|FBXO5|26271|F-box protein 5##AK026197|FBXO5|26271|F-box protein 5##AK314456|FBXO5|26271|F-box protein 5##NM_012177|FBXO5|26271|F-box protein 5##AJ420499|FBXO5|26271|F-box protein 5##AK055221|FBXO5|26271|F-box protein 5##NM_001142522|FBXO5|26271|F-box protein 5##AK027684|MTRF1L|54516|mitochondrial translational release factor 1-like##AK225321|MTRF1L|54516|mitochondrial translational release factor 1-like##AK225970|MTRF1L|54516|mitochondrial translational release factor 1-like##AK290662|MTRF1L|54516|mitochondrial translational release factor 1-like##BC014428|MTRF1L|54516|mitochondrial translational release factor 1-like	0.0	
chr6	332459	332540	reg1021915.p3	3.829	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-40002	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-40414	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	59265	+	AF508547 BC101697 BC101699 NM_148959	324454	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	360591	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chr9	68316008	68316103	reg1035979.p1	3.829	+	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	-389239	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-1762780	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-1821859	-	TSC_hg19_v1_chr9_+_68726468 AK311167	410447	+	TSC_hg19_v1_chr9_+_69065493 AK311167	749483	+	NM_001085476	886148	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6	0.666566	CTCF.p2:98:0.486
chr9	71564333	71564450	reg1022943.p1	3.829	+	CU680482 TSC_hg19_v1_chr9_+_71395147	-169275	+	TSC_hg19_v1_chr9_+_71394980 NM_138333 BC013062 AK126379 AK304099	-169440	+	TSC_hg19_v1_chr9_+_71320206 AK295587 AK292734 NM_003558	-244015	+	TSC_hg19_v1_chr9_-_71590760 AK057188	26367	-	DQ890764 DQ893927 AB463461 BC039888 NM_002732	64632	-	NM_000144 NM_001161706 NM_181425	86087	+	NM_138333|FAM122A|116224|family with sequence similarity 122A##BC013062|FAM122A|116224|family with sequence similarity 122A##AK126379|FAM122A|116224|family with sequence similarity 122A##AK295587|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##AK292734|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_003558|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##DQ890764|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##DQ893927|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##BC039888|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_002732|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_000144|FXN|2395|frataxin##NM_001161706|FXN|2395|frataxin##NM_181425|FXN|2395|frataxin	0.0	
chr10	95462179	95462270	reg1021878.p1	3.828	+	NM_006204 U31973 BC111377	-89817	+	X00129 TSC_hg19_v1_chr10_-_95360993 BC020633 NM_006744	-101246	-	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	-135715	+	TSC_hg19_v1_chr10_-_95462320 AJ431721 AJ431722 AJ431723 AJ431724 AJ431725 AK090955 AX746703 NM_145246	111	-	NM_005097 BC022500 AF055636 AF473548 AK309416 AY358885 AK303956	55422	+	TSC_hg19_v1_chr10_+_95653753 AK091309 AX746907 NM_001134658 NM_153226 BC036382 BC058549 BC143283 BC143284 BC104814 BC047102	191516	+	NM_006204|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##U31973|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##BC111377|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##X00129|RBP4|5950|retinol binding protein 4, plasma##BC020633|RBP4|5950|retinol binding protein 4, plasma##NM_006744|RBP4|5950|retinol binding protein 4, plasma##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1##AJ431721|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431722|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431723|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431724|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AJ431725|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##AK090955|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_145246|FRA10AC1|118924|fragile site, folic acid type, rare, fra(10)(q23.3) or fra(10)(q24.2) candidate 1##NM_005097|LGI1|9211|leucine-rich, glioma inactivated 1##BC022500|LGI1|9211|leucine-rich, glioma inactivated 1##AF055636|LGI1|9211|leucine-rich, glioma inactivated 1##AF473548|LGI1|9211|leucine-rich, glioma inactivated 1##AK309416|LGI1|9211|leucine-rich, glioma inactivated 1##AY358885|LGI1|9211|leucine-rich, glioma inactivated 1##AK303956|LGI1|9211|leucine-rich, glioma inactivated 1##AK091309|SLC35G1|159371|solute carrier family 35, member G1##NM_001134658|SLC35G1|159371|solute carrier family 35, member G1##NM_153226|SLC35G1|159371|solute carrier family 35, member G1##BC036382|SLC35G1|159371|solute carrier family 35, member G1##BC143284|SLC35G1|159371|solute carrier family 35, member G1##BC104814|SLC35G1|159371|solute carrier family 35, member G1##BC047102|SLC35G1|159371|solute carrier family 35, member G1	0.0	
chr1	161135857	161136037	reg1019897.p2	3.828	+	TSC_hg19_v1_chr1_+_161129289 BC090946 AK292319 AK310326 AF233442 AF217979 AF177758	-6602	+	TSC_hg19_v1_chr1_+_161129276 NM_001014443 NM_012475 AB208899	-6689	+	TSC_hg19_v1_chr1_+_161123772 AK311562 AB154405 DQ893161 DQ896457	-12176	+	NM_000309 NM_001122764 BC002357 D38537 U26446 AK094855 AK302298 AK298912	293	+	AK056851 AF038661 BC000276 AF020921 BC006099 TSC_hg19_v1_chr1_-_161147285 BC009985 AK291455 AK092493 AK023311	11320	-	NM_001199873 NM_001199874 NM_003779	11810	-	BC090946|USP21|27005|ubiquitin specific peptidase 21##AK292319|USP21|27005|ubiquitin specific peptidase 21##AK310326|USP21|27005|ubiquitin specific peptidase 21##AF233442|USP21|27005|ubiquitin specific peptidase 21##AF217979|USP21|27005|ubiquitin specific peptidase 21##AF177758|USP21|27005|ubiquitin specific peptidase 21##NM_001014443|USP21|27005|ubiquitin specific peptidase 21##NM_012475|USP21|27005|ubiquitin specific peptidase 21##AB208899|USP21|27005|ubiquitin specific peptidase 21##AB154405|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##DQ893161|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##DQ896457|UFC1|51506|ubiquitin-fold modifier conjugating enzyme 1##NM_000309|PPOX|5498|protoporphyrinogen oxidase##NM_001122764|PPOX|5498|protoporphyrinogen oxidase##BC002357|PPOX|5498|protoporphyrinogen oxidase##D38537|PPOX|5498|protoporphyrinogen oxidase##U26446|PPOX|5498|protoporphyrinogen oxidase##AK094855|PPOX|5498|protoporphyrinogen oxidase##AK302298|PPOX|5498|protoporphyrinogen oxidase##AK298912|PPOX|5498|protoporphyrinogen oxidase##AK056851|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AF038661|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##BC000276|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##BC006099|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##BC009985|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AK291455|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AK092493|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##AK023311|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##NM_001199873|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##NM_001199874|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3##NM_003779|B4GALT3|8703|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3	0.17914	
chr1	19239838	19239929	reg1009171.p2	3.828	+	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-10729	-	AK294552 NM_001161504	-22499	-	NM_152232 AB527225	-53728	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	42916	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	296863	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	338109	-	DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##NM_001136265|IFFO2|126917|intermediate filament family orphan 2##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090	0.0	
chr19	14116071	14116142	reg1030900.p2	3.828	+	AK027100 AK298489 NM_001146254 NM_001146255	-51909	-	BC080575 NM_138353 TSC_hg19_v1_chr19_+_14063318	-52788	+	TSC_hg19_v1_chr19_+_14063308 AK093072 AX747902	-52808	+	TSC_hg19_v1_chr19_-_14116878 X58964	808	-	BC049826 TSC_hg19_v1_chr19_-_14117133 AK309824 NM_002918	1023	-	BC140935 AB076563 AF447451 BC110069 NM_080864	22881	+	AK027100|PODNL1|79883|podocan-like 1##AK298489|PODNL1|79883|podocan-like 1##NM_001146254|PODNL1|79883|podocan-like 1##NM_001146255|PODNL1|79883|podocan-like 1##BC080575|DCAF15|90379|DDB1 and CUL4 associated factor 15##NM_138353|DCAF15|90379|DDB1 and CUL4 associated factor 15##AK093072|DCAF15|90379|DDB1 and CUL4 associated factor 15##X58964|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##BC049826|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##AK309824|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##NM_002918|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##BC140935|RLN3|117579|relaxin 3##AB076563|RLN3|117579|relaxin 3##AF447451|RLN3|117579|relaxin 3##BC110069|RLN3|117579|relaxin 3##NM_080864|RLN3|117579|relaxin 3	0.0	
chr2	240196995	240197080	reg1031383.p1	3.828	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	-440274	+	TSC_hg19_v1_chr2_+_239335693 AF156777	-861348	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	-861431	+	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	125611	-	TSC_hg19_v1_chr2_-_240322695 BC039904	125661	-	TSC_hg19_v1_chr2_-_240323341 AK308791	126311	-	BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)##AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AK308791|HDAC4|9759|histone deacetylase 4	0.0	
chr6	42185692	42185804	reg1033619.p2	3.828	+	TSC_hg19_v1_chr6_-_42185603 NM_018141	-131	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-148	-	TSC_hg19_v1_chr6_-_42185597 AK316599 BC012560	-151	-	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	234075	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	346002	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	346029	+	NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##AK316599|MRPS10|55173|mitochondrial ribosomal protein S10##BC012560|MRPS10|55173|mitochondrial ribosomal protein S10##AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.0	
chr7	24755377	24755501	reg1023641.p1	3.828	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	-142351	+	BC029497 NM_000905 AK312156 K01911 M15789	-431596	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-1005523	+	TSC_hg19_v1_chr7_-_24797042 BC099911	41598	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	41628	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	41900	-	BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5	0.0	
chr10	97601523	97601703	reg1008798.p1	3.827	+	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	-86073	+	AJ133133 AJ133134 NM_001098175	-130078	+	BC068449 DQ278872 NM_001143973 NM_015631	-147714	-	AK294399 NM_001130446	66108	+	NM_001001732 NM_001159747 AK302377 BC075861	158251	+	TSC_hg19_v1_chr10_+_97803318 BC043175 NM_001134375 NM_001134376 NM_019084 AK092360 AK297264 AX747499	201768	+	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##BC068449|TCTN3|26123|tectonic family member 3##DQ278872|TCTN3|26123|tectonic family member 3##NM_001143973|TCTN3|26123|tectonic family member 3##NM_015631|TCTN3|26123|tectonic family member 3##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B##NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC043175|CCNJ|54619|cyclin J##NM_001134375|CCNJ|54619|cyclin J##NM_001134376|CCNJ|54619|cyclin J##NM_019084|CCNJ|54619|cyclin J##AK092360|CCNJ|54619|cyclin J##AK297264|CCNJ|54619|cyclin J	0.0	
chr1	12113987	12114079	reg1024324.p3	3.827	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-34463	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-34499	+	FJ618905 NM_021933	-34735	+	M83554 NM_001243 BC136400 BC171762 S75768	9511	+	D86042 BC063482 NM_152942 BC073839 BC141804	71983	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	113028	+	AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr1	209830730	209830858	reg1033976.p2	3.827	+	TSC_hg19_v1_chr1_-_209825820 BC058922 NM_000228	-4970	-	L25541 NM_001127641 D37766 TSC_hg19_v1_chr1_-_209825771 AK296851 AK309524	-5070	-	TSC_hg19_v1_chr1_-_209824718 NM_001017402	-6115	-	TSC_hg19_v1_chr1_+_209848757 NM_015714 BC009694	17930	+	TSC_hg19_v1_chr1_+_209848994 BT007101 CR542179 CR542193 DQ894610 EU176279	18217	+	NM_001206741 NM_181755	28730	+	BC058922|LAMB3|3914|laminin, beta 3##NM_000228|LAMB3|3914|laminin, beta 3##L25541|LAMB3|3914|laminin, beta 3##NM_001127641|LAMB3|3914|laminin, beta 3##D37766|LAMB3|3914|laminin, beta 3##AK296851|LAMB3|3914|laminin, beta 3##AK309524|LAMB3|3914|laminin, beta 3##NM_001017402|LAMB3|3914|laminin, beta 3##NM_015714|G0S2|50486|G0/G1switch 2##BC009694|G0S2|50486|G0/G1switch 2##BT007101|G0S2|50486|G0/G1switch 2##CR542179|G0S2|50486|G0/G1switch 2##CR542193|G0S2|50486|G0/G1switch 2##DQ894610|G0S2|50486|G0/G1switch 2##EU176279|G0S2|50486|G0/G1switch 2##NM_001206741|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##NM_181755|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1	0.05634	
chr13	67798453	67798600	reg1038221.p1	3.827	+	AK289924 NM_022843	-5808872	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-5809273	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-6827047	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	5978	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	2884015	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	4641733	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.996562	CTCF.p2:42:0.997
chr17	11048094	11048189	reg1036419.p2	3.827	+	AK021549 TSC_hg19_v1_chr17_-_10741398 AK299808 NM_001101387	-306734	-	AY550194 NM_001004313	-414496	-	NM_020233 BC070155 AB073393 AK292629 BC001294	-447193	+	NM_001173461 NM_001173462 NM_207386	96598	+	AK094349 TSC_hg19_v1_chr17_+_11465221 BC105704 BC105705 BC105707 BC105706	417055	+	AJ404468 NM_001372 AF257737 AK055990 AK310137	453626	+	AK021549|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##AK299808|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##NM_001101387|PIRT|644139|phosphoinositide-interacting regulator of transient receptor potential channels##AY550194|TMEM220|388335|transmembrane protein 220##NM_001004313|TMEM220|388335|transmembrane protein 220##NM_020233|C17orf48|56985|chromosome 17 open reading frame 48##BC070155|C17orf48|56985|chromosome 17 open reading frame 48##AB073393|C17orf48|56985|chromosome 17 open reading frame 48##AK292629|C17orf48|56985|chromosome 17 open reading frame 48##BC001294|C17orf48|56985|chromosome 17 open reading frame 48##NM_001173461|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_001173462|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##NM_207386|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##AK094349|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105704|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105705|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105707|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##BC105706|SHISA6|388336|shisa homolog 6 (Xenopus laevis)##AJ404468|DNAH9|1770|dynein, axonemal, heavy chain 9##NM_001372|DNAH9|1770|dynein, axonemal, heavy chain 9##AF257737|DNAH9|1770|dynein, axonemal, heavy chain 9##AK055990|DNAH9|1770|dynein, axonemal, heavy chain 9##AK310137|DNAH9|1770|dynein, axonemal, heavy chain 9	0.926096	CTCF.p2:-1:0.926
chr3	10240330	10240510	reg1018341.p1	3.827	+	NM_001570 BC125184 AK299033 AK312841 TSC_hg19_v1_chr3_+_10206602 AF026273 AB587544 AJ496794	-33820	+	TSC_hg19_v1_chr3_+_10183517 AB528056	-56882	+	AK304002 TSC_hg19_v1_chr3_+_10183487	-56922	+	TSC_hg19_v1_chr3_+_10290182 NM_014760	49755	+	TSC_hg19_v1_chr3_+_10290210 D86972	49842	+	TSC_hg19_v1_chr3_+_10290370 AK289794 BC090935 BC101776 BC101770	50102	+	NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2##BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK304002|VHL|7428|von Hippel-Lindau tumor suppressor##NM_014760|TATDN2|9797|TatD DNase domain containing 2##D86972|TATDN2|9797|TatD DNase domain containing 2##AK289794|TATDN2|9797|TatD DNase domain containing 2##BC090935|TATDN2|9797|TatD DNase domain containing 2##BC101776|TATDN2|9797|TatD DNase domain containing 2##BC101770|TATDN2|9797|TatD DNase domain containing 2	0.0	
chr9	129986497	129986621	reg1032956.p2	3.827	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-101529	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-101597	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-101651	-	NM_032293 AK293732 AK095679	40248	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	172887	+	TSC_hg19_v1_chr9_-_130186602 AK124330	200007	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.342052	CTCF.p2:-26:0.342
chr1	12264376	12264490	reg1033262.p2	3.826	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	-37322	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	-37372	+	D86042 BC063482 NM_152942 BC073839 BC141804	-78417	+	TSC_hg19_v1_chr1_+_12290088 NM_015378 NM_018156 AJ608774 AJ608775 AL162331	25674	+	TSC_hg19_v1_chr1_+_12403045 AK057675	138637	+	DQ426869 DQ893006 DQ896252 CU678154 AF061741 AK222593 BC002730 TSC_hg19_v1_chr1_-_12677700 AK310202 AY358093 AK309282 AK312961 BX648476 NM_004753	413150	-	AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_015378|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_018156|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608774|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608775|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AL162331|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AK057675|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##DQ426869|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ893006|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##DQ896252|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AF061741|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK222593|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BC002730|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK310202|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AY358093|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##AK312961|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##BX648476|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3##NM_004753|DHRS3|9249|dehydrogenase/reductase (SDR family) member 3	0.0	
chr12	102092569	102092674	reg1033291.p2	3.826	+	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	-999	+	AK296681 NM_002465 NM_206819 NM_206820 NM_206821 AK056587 AK292976 AK295727 AK303401 BC015187 BC030980 BC065720 TSC_hg19_v1_chr12_+_101988748 BC092418 X66276 X73114 AL831993 AL832000 AL832332 AL832350 AL832354 AL832456 BC117217 BC143495 BC143502 BC143503 BC143504 AL834249 BX649073 AB385254 AM392734 EU831907 EU832001	-103825	+	TSC_hg19_v1_chr12_-_101801573 AK311793 AK302911 AK299062 BC007000 BX537387 NM_001177	-291078	-	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	40598	-	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	131965	-	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	178497	+	NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##AK296681|MYBPC1|4604|myosin binding protein C, slow type##NM_002465|MYBPC1|4604|myosin binding protein C, slow type##NM_206819|MYBPC1|4604|myosin binding protein C, slow type##NM_206820|MYBPC1|4604|myosin binding protein C, slow type##NM_206821|MYBPC1|4604|myosin binding protein C, slow type##AK056587|MYBPC1|4604|myosin binding protein C, slow type##AK292976|MYBPC1|4604|myosin binding protein C, slow type##AK295727|MYBPC1|4604|myosin binding protein C, slow type##AK303401|MYBPC1|4604|myosin binding protein C, slow type##BC015187|MYBPC1|4604|myosin binding protein C, slow type##BC030980|MYBPC1|4604|myosin binding protein C, slow type##BC065720|MYBPC1|4604|myosin binding protein C, slow type##BC092418|MYBPC1|4604|myosin binding protein C, slow type##X66276|MYBPC1|4604|myosin binding protein C, slow type##X73114|MYBPC1|4604|myosin binding protein C, slow type##AL831993|MYBPC1|4604|myosin binding protein C, slow type##AL832000|MYBPC1|4604|myosin binding protein C, slow type##AL832332|MYBPC1|4604|myosin binding protein C, slow type##AL832350|MYBPC1|4604|myosin binding protein C, slow type##AL832354|MYBPC1|4604|myosin binding protein C, slow type##AL832456|MYBPC1|4604|myosin binding protein C, slow type##BC117217|MYBPC1|4604|myosin binding protein C, slow type##BC143495|MYBPC1|4604|myosin binding protein C, slow type##BC143502|MYBPC1|4604|myosin binding protein C, slow type##BC143503|MYBPC1|4604|myosin binding protein C, slow type##BC143504|MYBPC1|4604|myosin binding protein C, slow type##AL834249|MYBPC1|4604|myosin binding protein C, slow type##BX649073|MYBPC1|4604|myosin binding protein C, slow type##AM392734|MYBPC1|4604|myosin binding protein C, slow type##EU831907|MYBPC1|4604|myosin binding protein C, slow type##EU832001|MYBPC1|4604|myosin binding protein C, slow type##AK311793|ARL1|400|ADP-ribosylation factor-like 1##AK302911|ARL1|400|ADP-ribosylation factor-like 1##AK299062|ARL1|400|ADP-ribosylation factor-like 1##BC007000|ARL1|400|ADP-ribosylation factor-like 1##BX537387|ARL1|400|ADP-ribosylation factor-like 1##NM_001177|ARL1|400|ADP-ribosylation factor-like 1##AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3##AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1	0.0	
chr19	17559609	17559725	reg1035151.p2	3.826	+	NM_001190844	-292	-	TSC_hg19_v1_chr19_+_17530872 BC011840 NM_138401 BC007883	-28768	+	TSC_hg19_v1_chr19_+_17530855 AK057057 AK289487	-28819	+	BC014127 NM_138454 DQ426894	12076	-	AK294238 TSC_hg19_v1_chr19_+_17579599	19921	+	TSC_hg19_v1_chr19_+_17581292 AK299852 BC059399 NM_198580	21633	+	NM_001190844|TMEM221|100130519|transmembrane protein 221##BC011840|FAM125A|93343|family with sequence similarity 125, member A##NM_138401|FAM125A|93343|family with sequence similarity 125, member A##BC007883|FAM125A|93343|family with sequence similarity 125, member A##AK057057|FAM125A|93343|family with sequence similarity 125, member A##AK289487|FAM125A|93343|family with sequence similarity 125, member A##BC014127|NXNL1|115861|nucleoredoxin-like 1##NM_138454|NXNL1|115861|nucleoredoxin-like 1##DQ426894|NXNL1|115861|nucleoredoxin-like 1##AK294238|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##AK299852|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##BC059399|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1##NM_198580|SLC27A1|376497|solute carrier family 27 (fatty acid transporter), member 1	0.081473	
chr1	91978857	91978980	reg1035900.p2	3.826	+	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	-12237	+	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	-12499	+	TSC_hg19_v1_chr1_-_91870367 AB058637 AK294754 AK302582 AB058636 AB204867 NM_001017975	-108546	-	AK291345 BC126116 BC136295 BC143869 TSC_hg19_v1_chr1_-_92351559	372599	-	AK225799 TSC_hg19_v1_chr1_-_92351709 NM_001195683 NM_003243	372829	-	L07594 NM_001195684	392640	-	NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB058637|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK294754|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK302582|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB058636|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB204867|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001017975|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK291345|TGFBR3|7049|transforming growth factor, beta receptor III##BC126116|TGFBR3|7049|transforming growth factor, beta receptor III##BC136295|TGFBR3|7049|transforming growth factor, beta receptor III##BC143869|TGFBR3|7049|transforming growth factor, beta receptor III##AK225799|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195683|TGFBR3|7049|transforming growth factor, beta receptor III##NM_003243|TGFBR3|7049|transforming growth factor, beta receptor III##L07594|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195684|TGFBR3|7049|transforming growth factor, beta receptor III	0.282883	CTCF.p2:9:0.283
chr20	3825471	3825623	reg1035695.p1	3.826	+	TSC_hg19_v1_chr20_+_3801202 NM_001204446 NM_001204447 NM_018347 BC011985 AK002030 AK093332 BC043344	-24349	+	TSC_hg19_v1_chr20_+_3776956 S78187 Z68092 BC006395 M81934	-48542	+	AK092713 FR695900 FR695901 NM_004358 NM_021872 NM_021873 TSC_hg19_v1_chr20_+_3776429 BX647988 BC051711	-49114	+	TSC_hg19_v1_chr20_+_3827524 NM_001206491 NM_020746 AK296897 AB097003 AK123956 AK291785 BX649084 AK023799 AX775775 BC044952 AK130992	1949	+	AK021791 NM_024960 TSC_hg19_v1_chr20_+_3869569	43985	+	TSC_hg19_v1_chr20_+_3869593 AF494409 NM_153638	44120	+	NM_001204446|C20orf29|55317|chromosome 20 open reading frame 29##NM_001204447|C20orf29|55317|chromosome 20 open reading frame 29##NM_018347|C20orf29|55317|chromosome 20 open reading frame 29##BC011985|C20orf29|55317|chromosome 20 open reading frame 29##AK002030|C20orf29|55317|chromosome 20 open reading frame 29##AK093332|C20orf29|55317|chromosome 20 open reading frame 29##BC043344|C20orf29|55317|chromosome 20 open reading frame 29##S78187|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##Z68092|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BC006395|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##M81934|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##AK092713|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##FR695900|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##FR695901|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_004358|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_021872|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_021873|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BX647988|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##BC051711|CDC25B|994|cell division cycle 25 homolog B (S. pombe)##NM_001206491|MAVS|57506|mitochondrial antiviral signaling protein##NM_020746|MAVS|57506|mitochondrial antiviral signaling protein##AK296897|MAVS|57506|mitochondrial antiviral signaling protein##AB097003|MAVS|57506|mitochondrial antiviral signaling protein##AK123956|MAVS|57506|mitochondrial antiviral signaling protein##AK291785|MAVS|57506|mitochondrial antiviral signaling protein##BX649084|MAVS|57506|mitochondrial antiviral signaling protein##AK023799|MAVS|57506|mitochondrial antiviral signaling protein##BC044952|MAVS|57506|mitochondrial antiviral signaling protein##AK130992|MAVS|57506|mitochondrial antiviral signaling protein##AK021791|PANK2|80025|pantothenate kinase 2##NM_024960|PANK2|80025|pantothenate kinase 2##AF494409|PANK2|80025|pantothenate kinase 2##NM_153638|PANK2|80025|pantothenate kinase 2	0.0	
chr2	109830663	109830729	reg1033504.p2	3.826	+	NM_001099289 DQ307286	-84633	+	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	-224949	-	TSC_hg19_v1_chr2_-_109605623 AK296936	-225077	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	540785	-	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	541029	-	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	541249	+	NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##AK296936|EDAR|10913|ectodysplasin A receptor##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57	0.0	
chr2	179838929	179839040	reg1033918.p1	3.826	+	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-166881	-	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	-179283	-	TSC_hg19_v1_chr2_+_179387947 AK093733	-451024	+	AL832777 NM_173648	75801	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	290421	-	AK057999 NM_001113398	588330	-	X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##X98114|TTN|7273|titin##X98115|TTN|7273|titin##AK093733|LOC100506866|100506866|uncharacterized LOC100506866##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B	0.0	
chr2	196529392	196529508	reg1034852.p1	3.826	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	-7542	+	BC029413 NM_001127257 CR749813	-7875	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-3469821	-	AB463018 AF327442 AK094515 NM_018897 AB023161	404045	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	506829	-	TSC_hg19_v1_chr2_-_197036310 NM_004226	506868	-	NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##NM_004226|STK17B|9262|serine/threonine kinase 17b	0.098253	
chr22	43326858	43326973	reg1034413.p1	3.826	+	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-73560	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	-73645	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	-73704	-	BC008037 NM_007229	16131	-	AL136845 NM_001184971	28971	-	TSC_hg19_v1_chr22_-_43411136 AF128536	84224	-	NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	0.0	
chr3	19188217	19188321	reg1036511.p1	3.826	+	BC001744 NM_001131010	-708036	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	-721472	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-1404102	-	AK295633 AY053503 NM_144633 AB209053 AK309034	1735	+	BC028198 AK097644 NM_144715	787419	-	TSC_hg19_v1_chr3_+_19988586 NM_004162	800420	+	BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##BC028198|EFHB|151651|EF-hand domain family, member B##AK097644|EFHB|151651|EF-hand domain family, member B##NM_144715|EFHB|151651|EF-hand domain family, member B##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family	0.0	
chr5	115962743	115962924	reg1033881.p1	3.826	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-52319	-	TSC_hg19_v1_chr5_+_115898220 D28352	-64609	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-542112	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2361405	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2443978	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2444332	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr6	39419733	39419870	reg1037589.p1	3.826	+	AF358909 AY253145 AY253146 AY253147 BC111860 NM_001135105 NM_001135106 NM_001135107 NM_032115 EU978943	-129462	-	AF358910 CU693040 DQ891712 DQ894889 EU978944 BC025726 AY358853 AF339912 AK310582 AK315273 NM_031460 NM_001135111	-137636	-	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	-222561	-	BC117307 BC143444 BC143445 AK131471 NM_145027	273344	-	TSC_hg19_v1_chr6_+_39760140 AK091749 AX747160	340338	+	TSC_hg19_v1_chr6_+_39760151 AK310941 AB002379 NM_001201427 BC047575	340361	+	AF358909|KCNK16|83795|potassium channel, subfamily K, member 16##AY253145|KCNK16|83795|potassium channel, subfamily K, member 16##AY253146|KCNK16|83795|potassium channel, subfamily K, member 16##AY253147|KCNK16|83795|potassium channel, subfamily K, member 16##BC111860|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135105|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135106|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135107|KCNK16|83795|potassium channel, subfamily K, member 16##NM_032115|KCNK16|83795|potassium channel, subfamily K, member 16##EU978943|KCNK16|83795|potassium channel, subfamily K, member 16##AF358910|KCNK17|89822|potassium channel, subfamily K, member 17##DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17##DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17##EU978944|KCNK17|89822|potassium channel, subfamily K, member 17##BC025726|KCNK17|89822|potassium channel, subfamily K, member 17##AY358853|KCNK17|89822|potassium channel, subfamily K, member 17##AF339912|KCNK17|89822|potassium channel, subfamily K, member 17##AK310582|KCNK17|89822|potassium channel, subfamily K, member 17##AK315273|KCNK17|89822|potassium channel, subfamily K, member 17##NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17##NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17##AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5##BC117307|KIF6|221458|kinesin family member 6##BC143444|KIF6|221458|kinesin family member 6##BC143445|KIF6|221458|kinesin family member 6##AK131471|KIF6|221458|kinesin family member 6##NM_145027|KIF6|221458|kinesin family member 6##AK310941|DAAM2|23500|dishevelled associated activator of morphogenesis 2##AB002379|DAAM2|23500|dishevelled associated activator of morphogenesis 2##NM_001201427|DAAM2|23500|dishevelled associated activator of morphogenesis 2##BC047575|DAAM2|23500|dishevelled associated activator of morphogenesis 2	0.0	
chr9	37119959	37120140	reg1030738.p1	3.826	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	-40041	+	TSC_hg19_v1_chr9_+_37079908 AK091718	-40143	+	TSC_hg19_v1_chr9_-_37034361 NM_016734	-85633	-	NM_032226 TSC_hg19_v1_chr9_+_37120504	437	+	TSC_hg19_v1_chr9_+_37120506 BC034022	459	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	534	+	BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##NM_016734|PAX5|5079|paired box 5##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7	0.0	
chrX	24072430	24072558	reg1029151.p2	3.826	+	AK057298 NM_030624	-27192	-	AK058173 NM_001169574 NM_152761 BC117344 BC117346 BC144007	-146328	+	TSC_hg19_v1_chrX_-_23926052 AY359114 AK311865 AF061264 BC016814 BC002333 BC010102 NM_024122	-146484	-	TSC_hg19_v1_chrX_+_24073062 BC019906 NM_001415	570	+	TSC_hg19_v1_chrX_+_24073072 AK222577 AK290397 AK312247 AB590041 CU676476 DQ891794 DQ894977 AB451230 AB451353 L19161	584	+	AB209892 NM_001178086 NM_001178095 X59738 TSC_hg19_v1_chrX_+_24167845 NM_001178084 NM_001178085 NM_003410	95298	+	AK057298|KLHL15|80311|kelch-like 15 (Drosophila)##NM_030624|KLHL15|80311|kelch-like 15 (Drosophila)##AK058173|CXorf58|254158|chromosome X open reading frame 58##NM_001169574|CXorf58|254158|chromosome X open reading frame 58##NM_152761|CXorf58|254158|chromosome X open reading frame 58##BC117344|CXorf58|254158|chromosome X open reading frame 58##BC117346|CXorf58|254158|chromosome X open reading frame 58##BC144007|CXorf58|254158|chromosome X open reading frame 58##AY359114|APOO|79135|apolipoprotein O##AK311865|APOO|79135|apolipoprotein O##AF061264|APOO|79135|apolipoprotein O##BC016814|APOO|79135|apolipoprotein O##BC002333|APOO|79135|apolipoprotein O##BC010102|APOO|79135|apolipoprotein O##NM_024122|APOO|79135|apolipoprotein O##BC019906|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##NM_001415|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB209892|ZFX|7543|zinc finger protein, X-linked##NM_001178086|ZFX|7543|zinc finger protein, X-linked##NM_001178095|ZFX|7543|zinc finger protein, X-linked##X59738|ZFX|7543|zinc finger protein, X-linked##NM_001178084|ZFX|7543|zinc finger protein, X-linked##NM_001178085|ZFX|7543|zinc finger protein, X-linked##NM_003410|ZFX|7543|zinc finger protein, X-linked	0.0	
chr1	20208838	20208912	reg1015988.p2	3.825	+	TSC_hg19_v1_chr1_+_20208887 NM_015207	-11	+	CR457228 BC051880 BC030960 AK000232 AK222991 NM_019062	-67194	-	TSC_hg19_v1_chr1_-_20126374 BX640987 NM_181719	-82465	-	TSC_hg19_v1_chr1_+_20208920 AB007928	39	+	TSC_hg19_v1_chr1_+_20208923 AB385337	88	+	AB464018 AF189279 BC069116 NM_014589	41205	-	NM_015207|OTUD3|23252|OTU domain containing 3##CR457228|RNF186|54546|ring finger protein 186##BC051880|RNF186|54546|ring finger protein 186##BC030960|RNF186|54546|ring finger protein 186##AK000232|RNF186|54546|ring finger protein 186##AK222991|RNF186|54546|ring finger protein 186##NM_019062|RNF186|54546|ring finger protein 186##BX640987|TMCO4|255104|transmembrane and coiled-coil domains 4##NM_181719|TMCO4|255104|transmembrane and coiled-coil domains 4##AB007928|OTUD3|23252|OTU domain containing 3##AF189279|PLA2G2E|30814|phospholipase A2, group IIE##BC069116|PLA2G2E|30814|phospholipase A2, group IIE##NM_014589|PLA2G2E|30814|phospholipase A2, group IIE	0.0	
chr12	117320707	117320810	reg1032025.p1	3.825	+	NM_003806 U76376	-1527	-	TSC_hg19_v1_chr12_+_117176119 NM_001109903 NM_032814 BC011878 AK027533	-144639	+	TSC_hg19_v1_chr12_-_117175868 AK222983 AK298857	-144889	-	TSC_hg19_v1_chr12_+_117348781 BC037296 NM_012174 NM_153348 AK289621 AF176707 BC075823	28028	+	DQ894644 TSC_hg19_v1_chr12_-_117537222 AF443207 BC015221 NM_001168325 NM_017899 AK000614	216505	-	AL136899 TSC_hg19_v1_chr12_-_117628277 BC091496 AF174601 AB020682 AK001699 AK314573 BC034045 BC042333 AK308141 NM_015002 NM_033624	307467	-	NM_003806|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##U76376|HRK|8739|harakiri, BCL2 interacting protein (contains only BH3 domain)##NM_001109903|RNFT2|84900|ring finger protein, transmembrane 2##NM_032814|RNFT2|84900|ring finger protein, transmembrane 2##BC011878|RNFT2|84900|ring finger protein, transmembrane 2##AK027533|RNFT2|84900|ring finger protein, transmembrane 2##AK222983|C12orf49|79794|chromosome 12 open reading frame 49##AK298857|C12orf49|79794|chromosome 12 open reading frame 49##BC037296|FBXW8|26259|F-box and WD repeat domain containing 8##NM_012174|FBXW8|26259|F-box and WD repeat domain containing 8##NM_153348|FBXW8|26259|F-box and WD repeat domain containing 8##AK289621|FBXW8|26259|F-box and WD repeat domain containing 8##AF176707|FBXW8|26259|F-box and WD repeat domain containing 8##DQ894644|TESC|54997|tescalcin##AF443207|TESC|54997|tescalcin##BC015221|TESC|54997|tescalcin##NM_001168325|TESC|54997|tescalcin##NM_017899|TESC|54997|tescalcin##AK000614|TESC|54997|tescalcin##AL136899|FBXO21|23014|F-box protein 21##BC091496|FBXO21|23014|F-box protein 21##AF174601|FBXO21|23014|F-box protein 21##AB020682|FBXO21|23014|F-box protein 21##AK001699|FBXO21|23014|F-box protein 21##AK314573|FBXO21|23014|F-box protein 21##BC034045|FBXO21|23014|F-box protein 21##BC042333|FBXO21|23014|F-box protein 21##AK308141|FBXO21|23014|F-box protein 21##NM_015002|FBXO21|23014|F-box protein 21##NM_033624|FBXO21|23014|F-box protein 21	0.0	
chr14	72918383	72918538	reg1035706.p2	3.825	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-518594	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-519307	+	AK294895 NM_001204423	-519644	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	442348	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	474675	+	AK098542 AF311602 NM_178441	535197	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.0	
chr14	94425812	94425992	reg1035406.p2	3.825	+	AB056723 NM_016150	-2136	-	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	-32194	+	NM_001207071 NM_138344 AK093387 AX748092	-40654	+	AK303686 TSC_hg19_v1_chr14_-_94442905	17006	-	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	17174	-	TSC_hg19_v1_chr14_+_94492685 BC009615 BC068058 NM_023112	66801	+	AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2##BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	0.0	
chr16	81813882	81813967	reg1034138.p1	3.825	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-994	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-1022	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	-1027	+	BC019670 AK315652 AK026740 NM_145168	231144	-	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	254937	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	255008	+	BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.0	
chr19	58330959	58331091	reg1029839.p1	3.825	+	AK097041 AK293445 NM_024762	-4745	-	BC051325 TSC_hg19_v1_chr19_+_58281063 AK300419 BC124558 BC041660 AB527919	-49896	+	AK302151 TSC_hg19_v1_chr19_+_58281007 NM_001077426 NM_001204814 NM_017652 AK095993 BC027922 AK000077 AB074270	-50008	+	TSC_hg19_v1_chr19_+_58331098 AK095812 AK303856 U71363	62	+	AK122919 NM_001204818 AK299091	10645	+	NM_001204817 NM_032828 TSC_hg19_v1_chr19_+_58361208	30170	+	AK097041|ZNF552|79818|zinc finger protein 552##AK293445|ZNF552|79818|zinc finger protein 552##NM_024762|ZNF552|79818|zinc finger protein 552##BC051325|ZNF586|54807|zinc finger protein 586##AK300419|ZNF586|54807|zinc finger protein 586##BC124558|ZNF586|54807|zinc finger protein 586##BC041660|ZNF586|54807|zinc finger protein 586##AK302151|ZNF586|54807|zinc finger protein 586##NM_001077426|ZNF586|54807|zinc finger protein 586##NM_001204814|ZNF586|54807|zinc finger protein 586##NM_017652|ZNF586|54807|zinc finger protein 586##AK095993|ZNF586|54807|zinc finger protein 586##BC027922|ZNF586|54807|zinc finger protein 586##AK000077|ZNF586|54807|zinc finger protein 586##AB074270|ZNF586|54807|zinc finger protein 586##U71363|LOC100293516|100293516|zinc finger protein##NM_001204818|LOC100293516|100293516|zinc finger protein##AK299091|LOC100293516|100293516|zinc finger protein##NM_001204817|ZNF587|84914|zinc finger protein 587##NM_032828|ZNF587|84914|zinc finger protein 587	0.0	
chr2	75957153	75957286	reg1031091.p1	3.825	+	TSC_hg19_v1_chr2_-_75938042 BC064559 BC000853 EF158467 EF158468 AB026911 NM_001201335 NM_003203	-19168	-	TSC_hg19_v1_chr2_-_75937707 AK097564 NM_001201334	-19500	-	TSC_hg19_v1_chr2_+_75873908 NM_014763 AK295578 AK291250 BC030144 CU688824 AB463123 BC021051 D14660 DQ892303 DQ895502	-83281	+	BC098267 BC098301 BC099738 BC110058 AY358324 TSC_hg19_v1_chr2_-_77749457 AK122612 AK126961 NM_001134745 NM_024993	1792199	-	AY359047 NM_001008387 NM_198448 AB161037 AB161038 AK292595 AY428734 BC103852 BC103853 BC103854	3295619	+	AK312057 D16816 AK308515 AK308507 AK311088 NM_006507	3357914	-	BC064559|GCFC2|6936|GC-rich sequence DNA-binding factor 2##BC000853|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158467|GCFC2|6936|GC-rich sequence DNA-binding factor 2##EF158468|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AB026911|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201335|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_003203|GCFC2|6936|GC-rich sequence DNA-binding factor 2##AK097564|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_001201334|GCFC2|6936|GC-rich sequence DNA-binding factor 2##NM_014763|MRPL19|9801|mitochondrial ribosomal protein L19##AK295578|MRPL19|9801|mitochondrial ribosomal protein L19##AK291250|MRPL19|9801|mitochondrial ribosomal protein L19##BC030144|MRPL19|9801|mitochondrial ribosomal protein L19##BC021051|MRPL19|9801|mitochondrial ribosomal protein L19##D14660|MRPL19|9801|mitochondrial ribosomal protein L19##DQ892303|MRPL19|9801|mitochondrial ribosomal protein L19##DQ895502|MRPL19|9801|mitochondrial ribosomal protein L19##BC098267|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC098301|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC099738|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##BC110058|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY358324|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK122612|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AK126961|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_001134745|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##NM_024993|LRRTM4|80059|leucine rich repeat transmembrane neuronal 4##AY359047|REG3G|130120|regenerating islet-derived 3 gamma##NM_001008387|REG3G|130120|regenerating islet-derived 3 gamma##NM_198448|REG3G|130120|regenerating islet-derived 3 gamma##AB161037|REG3G|130120|regenerating islet-derived 3 gamma##AB161038|REG3G|130120|regenerating islet-derived 3 gamma##AK292595|REG3G|130120|regenerating islet-derived 3 gamma##AY428734|REG3G|130120|regenerating islet-derived 3 gamma##BC103852|REG3G|130120|regenerating islet-derived 3 gamma##BC103853|REG3G|130120|regenerating islet-derived 3 gamma##BC103854|REG3G|130120|regenerating islet-derived 3 gamma##AK312057|REG1B|5968|regenerating islet-derived 1 beta##D16816|REG1B|5968|regenerating islet-derived 1 beta##AK308515|REG1B|5968|regenerating islet-derived 1 beta##AK308507|REG1B|5968|regenerating islet-derived 1 beta##NM_006507|REG1B|5968|regenerating islet-derived 1 beta	0.893913	CTCF.p2:-30:0.894
chr4	156681303	156681403	reg1033215.p2	3.825	+	TSC_hg19_v1_chr4_+_156680603 AK299916	-747	+	NM_000857 TSC_hg19_v1_chr4_+_156680190 AK315944 AK300296 AK315199 AK296680 AK307838 BC026332 BC060835 BC047620 X66533 AF020340	-1149	+	TSC_hg19_v1_chr4_+_156588813 NM_001130684 BC028384	-92536	+	AB528059 AJ252011 NM_017419	106047	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	143524	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	193695	-	AK299916|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##NM_000857|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315944|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK300296|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK315199|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK296680|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AK307838|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC026332|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC060835|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC047620|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##X66533|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##AF020340|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##NM_001130684|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##BC028384|GUCY1A3|2982|guanylate cyclase 1, soluble, alpha 3##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O	0.087015	
chr4	38732506	38732686	reg1011522.p1	3.825	+	AF289565 TSC_hg19_v1_chr4_-_38666549	-66107	-	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	-66770	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-753579	+	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	52003	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	73823	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	125832	-	AF289565|FLJ13197|79667|uncharacterized FLJ13197##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6	0.0	
chr5	10607547	10607727	reg1023871.p2	3.825	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-43195	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-165485	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-165634	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	153622	-	TSC_hg19_v1_chr5_-_10761341 BC002726	153705	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	153762	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.0	
chr5	143206814	143206995	reg1028098.p2	3.825	+	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	-15146	+	NM_001018074 NM_001018075 NM_001018077	-391828	-	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-422738	-	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	343231	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	343272	-	BC014253 BX647859 CR749463 TSC_hg19_v1_chr5_-_143550217 NM_001024947 NM_030799	343342	-	AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5##BC014253|YIPF5|81555|Yip1 domain family, member 5##BX647859|YIPF5|81555|Yip1 domain family, member 5##CR749463|YIPF5|81555|Yip1 domain family, member 5##NM_001024947|YIPF5|81555|Yip1 domain family, member 5##NM_030799|YIPF5|81555|Yip1 domain family, member 5	0.0	
chr5	35922149	35922288	reg1037523.p2	3.825	+	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	-65185	+	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	-304209	+	NM_000949	-691396	-	NM_001042625 BC017586 NM_144647	16590	-	CU686633 BC068446 AK308046 AK290809 AK057066 AK303770 AK315851 AK296136 NM_152404	69220	-	BC035012 NM_001171873	78909	-	BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##NM_000949|PRLR|5618|prolactin receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like##BC068446|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK308046|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK290809|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK057066|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK303770|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK315851|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK296136|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_152404|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##BC035012|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_001171873|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	0.0	
chr6	144409067	144409168	reg1033563.p1	3.825	+	EF100438 EF100439 EF100440 EF100441 EF100442 EF100443 EF100444 EF100445 TSC_hg19_v1_chr6_-_144385724 NM_001080951 NM_001080955	-23427	-	TSC_hg19_v1_chr6_-_144329394 AK314570 BC059359 AK096331 NM_001080952 NM_001080953 NM_001080954 NM_001080956 NM_002656 NM_006718 AJ311395 U72621	-79653	-	EF100446 EF100447 EF100448 EF100449 EF100450 EF100451 EF100452 TSC_hg19_v1_chr6_-_144329322	-79829	-	AB528231 AM393071 BC000198 TSC_hg19_v1_chr6_-_144416703 AK312079 AK074417	7554	-	NM_031287 TSC_hg19_v1_chr6_-_144416757	7645	-	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	62604	+	EF100438|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100439|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100440|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100441|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100442|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100443|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100444|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100445|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080951|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080955|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AK314570|PLAGL1|5325|pleiomorphic adenoma gene-like 1##BC059359|HYMAI|57061|hydatidiform mole associated and imprinted (non-protein coding)##AK096331|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080952|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080953|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080954|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_001080956|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_002656|PLAGL1|5325|pleiomorphic adenoma gene-like 1##NM_006718|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AJ311395|PLAGL1|5325|pleiomorphic adenoma gene-like 1##U72621|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100446|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100447|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100448|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100449|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100450|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100451|PLAGL1|5325|pleiomorphic adenoma gene-like 1##EF100452|PLAGL1|5325|pleiomorphic adenoma gene-like 1##AM393071|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##BC000198|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK312079|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##AK074417|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##NM_031287|SF3B5|83443|splicing factor 3b, subunit 5, 10kDa##NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11	0.0	
chr6	149387271	149387364	reg1026364.p1	3.825	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-319108	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-723126	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-723327	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	251786	+	AK315038 NM_015093 AK307650	252124	+	AY340238 NM_001002255 BC130305 HQ258040	334191	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr7	37007166	37007276	reg1014130.p2	3.825	+	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-243145	-	BC028678 NM_001100425	-577507	-	TSC_hg19_v1_chr7_+_36429470 BC070066 NM_018685 AK299803 AK291254 AF273437	-577781	+	BC064635 NM_001039459	17469	-	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	18499	-	AK291784 NM_001206482	386050	-	M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC028678|KIAA0895|23366|KIAA0895##NM_001100425|KIAA0895|23366|KIAA0895##BC070066|ANLN|54443|anillin, actin binding protein##NM_018685|ANLN|54443|anillin, actin binding protein##AK299803|ANLN|54443|anillin, actin binding protein##AK291254|ANLN|54443|anillin, actin binding protein##AF273437|ANLN|54443|anillin, actin binding protein##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1	0.149446	
chr11	16984369	16984482	reg1038206.p2	3.824	+	TSC_hg19_v1_chr11_+_16760204 BC103747 AK315382 BC007103 BC016352 BC020937 U51678 CR456882 CU675547 AK124165	-224141	+	NM_014267 TSC_hg19_v1_chr11_+_16760165	-224265	+	AF309034 NM_033326	-486500	-	TSC_hg19_v1_chr11_-_16996590 D28414	12151	-	AB385210 TSC_hg19_v1_chr11_-_17035962 BC071599 NM_175058	51540	-	X79239 AB528349 CU688732 TSC_hg19_v1_chr11_-_17099216 DQ891107 DQ894288 BC000475 BC029732 BC100032 BC006772 AK312060 BC066322 D28429 L01124 NM_001017	114814	-	BC103747|C11orf58|10944|chromosome 11 open reading frame 58##AK315382|C11orf58|10944|chromosome 11 open reading frame 58##BC007103|C11orf58|10944|chromosome 11 open reading frame 58##BC016352|C11orf58|10944|chromosome 11 open reading frame 58##BC020937|C11orf58|10944|chromosome 11 open reading frame 58##U51678|C11orf58|10944|chromosome 11 open reading frame 58##CR456882|C11orf58|10944|chromosome 11 open reading frame 58##NM_014267|C11orf58|10944|chromosome 11 open reading frame 58##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6##D28414|RPL36A|6173|ribosomal protein L36a##BC071599|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##NM_175058|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##X79239|RPS13|6207|ribosomal protein S13##DQ891107|RPS13|6207|ribosomal protein S13##DQ894288|RPS13|6207|ribosomal protein S13##BC000475|RPS13|6207|ribosomal protein S13##BC029732|RPS13|6207|ribosomal protein S13##BC100032|RPS13|6207|ribosomal protein S13##BC006772|RPS13|6207|ribosomal protein S13##AK312060|RPS13|6207|ribosomal protein S13##BC066322|RPS13|6207|ribosomal protein S13##L01124|RPS13|6207|ribosomal protein S13##NM_001017|RPS13|6207|ribosomal protein S13	0.030747	
chr1	155940408	155940524	reg1039869.p2	3.824	+	TSC_hg19_v1_chr1_-_155939059 AM393305 BT007407 CU676564 DQ891489 DQ894678	-1405	-	NM_181885 BC101507 BC101509 AY170824 AY288415 AY394502 EU432129	-28977	+	TSC_hg19_v1_chr1_-_155904201 AK225714	-36264	-	TSC_hg19_v1_chr1_-_155947967 AL512715 NM_004723	7479	-	TSC_hg19_v1_chr1_-_155948245 AF486838	7760	-	BC020567 TSC_hg19_v1_chr1_-_155948334 U72206 NM_001162383 NM_001162384	7860	-	AM393305|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##BT007407|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##DQ891489|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##DQ894678|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##NM_181885|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##BC101507|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##BC101509|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY170824|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY288415|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AY394502|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##EU432129|RXFP4|339403|relaxin/insulin-like family peptide receptor 4##AK225714|KIAA0907|22889|KIAA0907##AL512715|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##NM_004723|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##AF486838|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##BC020567|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##U72206|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##NM_001162383|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2##NM_001162384|ARHGEF2|9181|Rho/Rac guanine nucleotide exchange factor (GEF) 2	0.0	
chr11	60386062	60386242	reg1002230.p1	3.824	+	AY324188 AY324189 AY324190 NM_001012417 NM_001100909 BC140799 BC171746	-103204	+	AK000224 AK309275 NM_001164470 NM_017716 BC029793	-125896	+	NM_021950 NM_152866 AK225630 AK292168 AK300025 AK310118 BC002807 X07203 X12530	-162839	+	AF237905 NM_031457 AK310969 AK310884 AK315901 BC022895 AK308413 AF350504 AK310872	80980	+	NM_001098835 NM_152717 AK300233 BC031610 AK091846 AX747218 AY584608 AY584609	138257	+	AK122633 NM_206893 BC137259 BC137263	166693	+	AY324188|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324189|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324190|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001012417|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001100909|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC140799|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC171746|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AK000224|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_001164470|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_017716|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##BC029793|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_021950|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##NM_152866|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK225630|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK292168|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK300025|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK310118|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##BC002807|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##X07203|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##X12530|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AF237905|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_031457|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310969|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310884|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK315901|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##BC022895|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK308413|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AF350504|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310872|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_001098835|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##NM_152717|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK300233|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##BC031610|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK091846|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584608|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584609|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK122633|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_206893|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137259|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137263|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10	0.0	
chr1	234746366	234746547	reg1031958.p2	3.824	+	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-1210	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-2598	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-2625	-	TSC_hg19_v1_chr1_-_234895746 AF193050	149318	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	545633	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	545775	-	BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.53639	CTCF.p2:75:0.536
chr1	23885998	23886178	reg1031801.p2	3.824	+	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	-104	-	L22846 NM_004091	-28377	-	BT019523 AB463593 BC053676 AK313939 TSC_hg19_v1_chr1_-_23857464	-28713	-	NM_002167 X69111	196	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	132192	+	TSC_hg19_v1_chr1_+_24018295 BC018970	132211	+	BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##BT019523|E2F2|1870|E2F transcription factor 2##BC053676|E2F2|1870|E2F transcription factor 2##AK313939|E2F2|1870|E2F transcription factor 2##NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11##BC018970|RPL11|6135|ribosomal protein L11	0.0	
chr14	68551301	68551414	reg1013939.p2	3.824	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-264837	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-268058	-	AK315462 NM_152443	-382755	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	708363	-	NM_001244698 NM_004926	709273	-	NM_001244701 AB528867	711627	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr2	182213026	182213092	reg1036791.p1	3.824	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-367232	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-367416	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-367689	+	NM_000885	108559	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	108991	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	109263	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.0	
chr4	108964237	108964362	reg1036825.p1	3.824	+	TSC_hg19_v1_chr4_+_108911045 BC000306 AM392952 AM393255 DQ891419 DQ894593 AB528829 AF001902	-53226	+	AK314444 TSC_hg19_v1_chr4_+_108911011	-53287	+	AF001903 NM_001184705 NM_005327 TSC_hg19_v1_chr4_+_108910984 X96752	-53363	+	AK303272 NM_001166119	123615	-	TSC_hg19_v1_chr4_+_109088684 BC020624	124385	+	TSC_hg19_v1_chr4_-_109090113 AF288571 AK225772 NM_001130713 NM_001130714 NM_016269	125500	-	BC000306|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ891419|HADH|3033|hydroxyacyl-CoA dehydrogenase##DQ894593|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001902|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK314444|HADH|3033|hydroxyacyl-CoA dehydrogenase##AF001903|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_001184705|HADH|3033|hydroxyacyl-CoA dehydrogenase##NM_005327|HADH|3033|hydroxyacyl-CoA dehydrogenase##X96752|HADH|3033|hydroxyacyl-CoA dehydrogenase##AK303272|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001166119|LEF1|51176|lymphoid enhancer-binding factor 1##BC020624|LOC641518|641518|uncharacterized LOC641518##AF288571|LEF1|51176|lymphoid enhancer-binding factor 1##AK225772|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130713|LEF1|51176|lymphoid enhancer-binding factor 1##NM_001130714|LEF1|51176|lymphoid enhancer-binding factor 1##NM_016269|LEF1|51176|lymphoid enhancer-binding factor 1	0.72488	CTCF.p2:-13:0.725
chr4	120384014	120384123	reg1036350.p1	3.824	+	TSC_hg19_v1_chr4_-_120375778 BC070391	-8290	-	CU686944 AK025079 BC069617 BC069466 BC069625 BC069637 BC111791 NM_000134	-140782	-	AY605045 NM_001170330	-158469	-	AM392687 AM392735 AM392945 AM393171 AM393311 AM393426 AM393432 AM393814 AY264918 AB015656 NM_033430 AF155193 TSC_hg19_v1_chr4_-_120548474	164337	-	TSC_hg19_v1_chr4_-_120549121 AF155194 NM_033437	165108	-	AB527373 AM393036 AM393270 AM393448 AK290189 BC126233 AJ004865 AF155192 TSC_hg19_v1_chr4_-_120549960 AF043731 NM_001083	165835	-	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal##BC069617|FABP2|2169|fatty acid binding protein 2, intestinal##BC069466|FABP2|2169|fatty acid binding protein 2, intestinal##BC069625|FABP2|2169|fatty acid binding protein 2, intestinal##BC069637|FABP2|2169|fatty acid binding protein 2, intestinal##BC111791|FABP2|2169|fatty acid binding protein 2, intestinal##NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal##AY605045|C4orf3|401152|chromosome 4 open reading frame 3##NM_001170330|C4orf3|401152|chromosome 4 open reading frame 3##AM392687|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM392735|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM392945|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393171|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393311|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393426|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393432|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393814|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AY264918|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AB015656|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033430|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155193|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	0.197891	
chr5	126022281	126022392	reg1036387.p1	3.824	+	BC130495 BC130497 AK131015 NM_207408 HQ258080	-54921	+	AK023255 NM_032177 TSC_hg19_v1_chr5_+_125936641 BC021161 AK024065 AK298497 AK225464 CR457305 DQ893213 DQ896542	-85704	+	TSC_hg19_v1_chr5_-_125930891 AB489160 EU831757 EU831835 S74728 BC073174 BC071712 AK295526 BC002515 AK312459 AK297365 NM_001182 NM_001201377 NM_001202404	-91480	-	NM_005573 BC052951	89979	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	90495	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	90546	+	BC130495|C5orf48|389320|chromosome 5 open reading frame 48##BC130497|C5orf48|389320|chromosome 5 open reading frame 48##AK131015|C5orf48|389320|chromosome 5 open reading frame 48##NM_207408|C5orf48|389320|chromosome 5 open reading frame 48##HQ258080|C5orf48|389320|chromosome 5 open reading frame 48##AK023255|PHAX|51808|phosphorylated adaptor for RNA export##NM_032177|PHAX|51808|phosphorylated adaptor for RNA export##BC021161|PHAX|51808|phosphorylated adaptor for RNA export##AK024065|PHAX|51808|phosphorylated adaptor for RNA export##AK298497|PHAX|51808|phosphorylated adaptor for RNA export##AK225464|PHAX|51808|phosphorylated adaptor for RNA export##CR457305|PHAX|51808|phosphorylated adaptor for RNA export##DQ893213|PHAX|51808|phosphorylated adaptor for RNA export##DQ896542|PHAX|51808|phosphorylated adaptor for RNA export##EU831757|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##EU831835|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##S74728|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC073174|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC071712|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK295526|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##BC002515|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK312459|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##AK297365|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001182|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001201377|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_001202404|ALDH7A1|501|aldehyde dehydrogenase 7 family, member A1##NM_005573|LMNB1|4001|lamin B1##BC052951|LMNB1|4001|lamin B1##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1##AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1	0.0	
chr6	16872872	16872982	reg1029345.p1	3.824	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	-111230	-	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-634076	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-729617	+	NM_001190766	229561	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	408927	+	NM_001143941	409367	+	BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24##NM_001143941|RBM24|221662|RNA binding motif protein 24	0.0	
chr7	100492782	100492895	reg1010144.p2	3.824	+	BC017456 BC067904 AK292467 NM_001015072	-5533	-	TSC_hg19_v1_chr7_+_100472809 BC109116	-20012	+	TSC_hg19_v1_chr7_+_100472803 BC109117	-20033	+	BC105060 BC105062 BC143469 AK291321 TSC_hg19_v1_chr7_-_100493509 BC001541 AK223443 AF334270 BC026315 BC036813 NM_000665 NM_015831	673	-	AK130455 TSC_hg19_v1_chr7_+_100612694	119855	+	NM_001164462	120065	+	BC017456|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##BC067904|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##AK292467|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##NM_001015072|UFSP1|402682|UFM1-specific peptidase 1 (non-functional)##BC109116|SRRT|51593|serrate RNA effector molecule homolog (Arabidopsis)##BC109117|SRRT|51593|serrate RNA effector molecule homolog (Arabidopsis)##BC105060|ACHE|43|acetylcholinesterase##BC105062|ACHE|43|acetylcholinesterase##BC143469|ACHE|43|acetylcholinesterase##AK291321|ACHE|43|acetylcholinesterase##BC001541|ACHE|43|acetylcholinesterase##AK223443|ACHE|43|acetylcholinesterase##AF334270|ACHE|43|acetylcholinesterase##BC026315|ACHE|43|acetylcholinesterase##BC036813|ACHE|43|acetylcholinesterase##NM_000665|ACHE|43|acetylcholinesterase##NM_015831|ACHE|43|acetylcholinesterase##NM_001164462|MUC12|10071|mucin 12, cell surface associated	0.0	
chr8	29347839	29348020	reg1019107.p1	3.824	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-139859	-	AL137704 NM_057158	-141608	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-227315	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	592545	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	592643	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	605014	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chrX	39437677	39437765	reg1032942.p1	3.824	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-774181	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-774261	+	BC008908 NM_021242	-774649	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	518971	-	BC114220 NM_001123383 NM_001123384	598860	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	1002465	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.313252	CTCF.p2:16:0.313
chrX	46432175	46432280	reg1036754.p2	3.824	+	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	-27283	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	-27371	-	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	-125516	+	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	1051	+	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	186302	-	TSC_hg19_v1_chrX_-_46618608 BC094742	186403	-	BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##BC094742|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7	0.199598	
chr12	22171968	22172079	reg1038089.p1	3.823	+	AK056519 TSC_hg19_v1_chr12_-_22094251 BC033804	-77773	-	NM_005691 NM_020297	-82396	-	BC000544 AK291821 D50312 NM_004982	-244343	-	TSC_hg19_v1_chr12_+_22199207 BC016609 NM_018686 AL832975 AK022927 AK222981	27149	+	AF271388 TSC_hg19_v1_chr12_+_22199226 AF397212	27206	+	BC117285 BC126162 BC031081 BC046158 AK315340 EU041716 NM_003034 X77922 TSC_hg19_v1_chr12_-_22487789	315657	-	AK056519|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##BC033804|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##NM_005691|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##NM_020297|ABCC9|10060|ATP-binding cassette, sub-family C (CFTR/MRP), member 9##BC000544|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##AK291821|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##D50312|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##NM_004982|KCNJ8|3764|potassium inwardly-rectifying channel, subfamily J, member 8##BC016609|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##NM_018686|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AL832975|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK022927|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AK222981|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AF271388|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##AF397212|CMAS|55907|cytidine monophosphate N-acetylneuraminic acid synthetase##BC117285|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC126162|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC031081|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##BC046158|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##AK315340|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##EU041716|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##NM_003034|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1##X77922|ST8SIA1|6489|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1	0.98708	CTCF.p2:3:0.987
chr17	71228580	71228735	reg1034971.p1	3.823	+	TSC_hg19_v1_chr17_+_71228596 AK292838	-63	+	TSC_hg19_v1_chr17_-_71228534 AK304556 NM_001098832 NM_032837	-148	-	TSC_hg19_v1_chr17_-_71228458 BX648968	-199	-	TSC_hg19_v1_chr17_+_71228800 AY163812 NM_001100621 NM_001100622 NM_017941 AL136740 AK000728	149	+	BC005005 TSC_hg19_v1_chr17_+_71229423	733	+	BC157870 NM_001129885	29361	-	AK292838|C17orf80|55028|chromosome 17 open reading frame 80##AK304556|FAM104A|84923|family with sequence similarity 104, member A##NM_001098832|FAM104A|84923|family with sequence similarity 104, member A##NM_032837|FAM104A|84923|family with sequence similarity 104, member A##BX648968|FAM104A|84923|family with sequence similarity 104, member A##AY163812|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100621|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100622|C17orf80|55028|chromosome 17 open reading frame 80##NM_017941|C17orf80|55028|chromosome 17 open reading frame 80##AL136740|C17orf80|55028|chromosome 17 open reading frame 80##AK000728|C17orf80|55028|chromosome 17 open reading frame 80##BC005005|C17orf80|55028|chromosome 17 open reading frame 80##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like	0.012165	
chr1	92951643	92951823	reg1021911.p2	3.823	+	BC032751 TSC_hg19_v1_chr1_-_92951630 NM_001127216	-118	-	TSC_hg19_v1_chr1_-_92949508 AK123009	-2201	-	AK313876 NM_001127215 TSC_hg19_v1_chr1_-_92949370	-2354	-	U67369 NM_005263 TSC_hg19_v1_chr1_-_92952458	717	-	AB449875 AB587441 AF008915 AF042345 NM_005665	306222	-	TSC_hg19_v1_chr1_+_93297596 NM_000969 AK092963 AK095815 AK314720 AB055762	345831	+	BC032751|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127216|GFI1|2672|growth factor independent 1 transcription repressor##AK123009|GFI1|2672|growth factor independent 1 transcription repressor##AK313876|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127215|GFI1|2672|growth factor independent 1 transcription repressor##U67369|GFI1|2672|growth factor independent 1 transcription repressor##NM_005263|GFI1|2672|growth factor independent 1 transcription repressor##AB449875|EVI5|7813|ecotropic viral integration site 5##AF008915|EVI5|7813|ecotropic viral integration site 5##NM_005665|EVI5|7813|ecotropic viral integration site 5##NM_000969|RPL5|6125|ribosomal protein L5##AK092963|RPL5|6125|ribosomal protein L5##AK095815|RPL5|6125|ribosomal protein L5##AK314720|RPL5|6125|ribosomal protein L5##AB055762|RPL5|6125|ribosomal protein L5	0.0	
chr21	45758255	45758369	reg1034763.p1	3.823	+	BC004920 TSC_hg19_v1_chr21_+_45736378	-21947	+	TSC_hg19_v1_chr21_+_45725068 CU675401 AB528282 DQ893435 DQ896792	-33179	+	TSC_hg19_v1_chr21_+_45719971 BC008964 BC009919 BC006422 AK091488 AX747017 BC007536 AB209127 CU675691 CU679201	-38332	+	CU689146 Z93322 TSC_hg19_v1_chr21_-_45759141 Y11392	818	-	TSC_hg19_v1_chr21_-_45759257 U84569 BC072012	937	-	TSC_hg19_v1_chr21_-_45759288 BC031300 NM_004928	969	-	BC004920|PFKL|5211|phosphofructokinase, liver##DQ893435|PFKL|5211|phosphofructokinase, liver##DQ896792|PFKL|5211|phosphofructokinase, liver##BC008964|PFKL|5211|phosphofructokinase, liver##BC009919|PFKL|5211|phosphofructokinase, liver##BC006422|PFKL|5211|phosphofructokinase, liver##AK091488|PFKL|5211|phosphofructokinase, liver##BC007536|PFKL|5211|phosphofructokinase, liver##AB209127|PFKL|5211|phosphofructokinase, liver##Z93322|C21orf2|755|chromosome 21 open reading frame 2##Y11392|C21orf2|755|chromosome 21 open reading frame 2##U84569|C21orf2|755|chromosome 21 open reading frame 2##BC072012|C21orf2|755|chromosome 21 open reading frame 2##BC031300|C21orf2|755|chromosome 21 open reading frame 2##NM_004928|C21orf2|755|chromosome 21 open reading frame 2	0.486713	CTCF.p2:-39:0.487
chr22	24574593	24574687	reg1032611.p2	3.823	+	TSC_hg19_v1_chr22_+_24551954 AL390166	-22683	+	TSC_hg19_v1_chr22_+_24407870 AB002328 BC041659	-166745	+	TSC_hg19_v1_chr22_+_24407863 NM_001199281 BC013099 BC028969	-166800	+	TSC_hg19_v1_chr22_+_24577424 AK026431	2787	+	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	2804	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	66339	-	AL390166|CABIN1|23523|calcineurin binding protein 1##AB002328|CABIN1|23523|calcineurin binding protein 1##BC041659|CABIN1|23523|calcineurin binding protein 1##NM_001199281|CABIN1|23523|calcineurin binding protein 1##BC013099|CABIN1|23523|calcineurin binding protein 1##BC028969|CABIN1|23523|calcineurin binding protein 1##AK026431|SUSD2|56241|sushi domain containing 2##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5	0.951068	CTCF.p2:-18:0.951
chr22	37545924	37546104	reg1029181.p1	3.823	+	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	-62	-	CR456446 TSC_hg19_v1_chr22_-_37505748	-40336	-	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	-46439	-	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	38277	-	BC042068 NM_001051 AK291165	62369	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	94207	-	BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##CR456446|TMPRSS6|164656|transmembrane protease, serine 6##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)	0.0	
chr3	45883725	45883905	reg1031666.p2	3.823	+	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	-220	-	TSC_hg19_v1_chr3_-_45838112 AF125107	-45667	-	BC036073 TSC_hg19_v1_chr3_-_45838029 NM_020208 NM_022405	-45785	-	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	44240	+	NM_006564 Y13248	101157	+	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	153506	-	BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC036073|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_020208|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_022405|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1	0.0	
chr8	102915011	102915191	reg1027759.p2	3.823	+	NM_032041	-111663	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-111901	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-111918	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	221422	-	NM_001040630	222033	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	336072	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.0	
chr8	6562728	6562810	reg1034835.p2	3.823	+	HQ258258 AF187858 AB009865 BC126200 BC126202 BC143902 AF218015 BC022490 AK075219 AK225698 AK290070 AK310171 AK312541 NM_001118887 NM_001118888 NM_001147 TSC_hg19_v1_chr8_-_6420798 AJ289781	-142078	-	AK301702 TSC_hg19_v1_chr8_+_6264167	-298597	+	NM_001172574 NM_001172575 NM_024596 BC056195 BC030702 AK308387 TSC_hg19_v1_chr8_+_6264158	-298634	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	3122	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	3171	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	3414	+	HQ258258|ANGPT2|285|angiopoietin 2##AF187858|ANGPT2|285|angiopoietin 2##AB009865|ANGPT2|285|angiopoietin 2##BC126200|ANGPT2|285|angiopoietin 2##BC126202|ANGPT2|285|angiopoietin 2##BC143902|ANGPT2|285|angiopoietin 2##AF218015|ANGPT2|285|angiopoietin 2##BC022490|ANGPT2|285|angiopoietin 2##AK075219|ANGPT2|285|angiopoietin 2##AK225698|ANGPT2|285|angiopoietin 2##AK290070|ANGPT2|285|angiopoietin 2##AK310171|ANGPT2|285|angiopoietin 2##AK312541|ANGPT2|285|angiopoietin 2##NM_001118887|ANGPT2|285|angiopoietin 2##NM_001118888|ANGPT2|285|angiopoietin 2##NM_001147|ANGPT2|285|angiopoietin 2##AJ289781|ANGPT2|285|angiopoietin 2##AK301702|MCPH1|79648|microcephalin 1##NM_001172574|MCPH1|79648|microcephalin 1##NM_001172575|MCPH1|79648|microcephalin 1##NM_024596|MCPH1|79648|microcephalin 1##BC056195|MCPH1|79648|microcephalin 1##BC030702|MCPH1|79648|microcephalin 1##AK308387|MCPH1|79648|microcephalin 1##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	0.0	
chr10	44530643	44530709	reg1031120.p1	3.822	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-386370	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-386471	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-428779	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	349823	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	876042	+	AK056518 TSC_hg19_v1_chr10_-_45455156	924471	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.0	
chr1	245132797	245132864	reg1043416.p1	3.822	+	TSC_hg19_v1_chr1_-_245027820 AF068846 NM_004501 NM_031844	-105006	-	TSC_hg19_v1_chr1_-_245027806 AK126868	-105031	-	TSC_hg19_v1_chr1_-_245027786 AK297119	-105047	-	TSC_hg19_v1_chr1_+_245133091 NM_032328	288	+	AK090927 AX746687 TSC_hg19_v1_chr1_+_245133411	532	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	800	+	AF068846|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)##NM_004501|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)##NM_031844|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)##AK126868|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)##AK297119|HNRNPU|3192|heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A)##NM_032328|EFCAB2|84288|EF-hand calcium binding domain 2##AK090927|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2	0.0	
chr12	863180	863297	reg1031938.p1	3.822	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	-482	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	-1082	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-90523	-	BC013629 TSC_hg19_v1_chr12_+_1017145	153844	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	195588	-	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	237214	+	AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1	0.0	
chr15	80818302	80818409	reg1037059.p1	3.822	+	AK295763 TSC_hg19_v1_chr15_+_80733623	-84750	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	-121621	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-372979	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	169307	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	169654	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	253366	+	AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199	0.0	
chr15	82395948	82396115	reg1037296.p1	3.822	+	AB095929 BC111545 BC036211 TSC_hg19_v1_chr15_-_82338485	-57555	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	-57665	-	AK094145 TSC_hg19_v1_chr15_-_82336883	-59148	-	BC014628 TSC_hg19_v1_chr15_-_82555043 AK300348 AK056656 BX538332	159000	-	TSC_hg19_v1_chr15_-_82555076 NM_001040610 NM_024580	159058	-	TSC_hg19_v1_chr15_+_82555158 AL833762 NM_001008226 BC144647 AK304339	159122	+	AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)##BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)##BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##BC014628|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK300348|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK056656|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BX538332|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_001040610|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_024580|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AL833762|FAM154B|283726|family with sequence similarity 154, member B##NM_001008226|FAM154B|283726|family with sequence similarity 154, member B##AK304339|FAM154B|283726|family with sequence similarity 154, member B	0.012233	
chr2	99225105	99225203	reg1029959.p2	3.822	+	TSC_hg19_v1_chr2_+_99225088 AF077038	-62	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	-84	+	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	-104	+	AK304393 AK309852 NM_001160154	54781	-	TSC_hg19_v1_chr2_-_99347557 AK314024	122342	-	NM_012214 TSC_hg19_v1_chr2_-_99347596	122459	-	AF077038|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##AK304393|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK309852|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##NM_001160154|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A	0.038202	
chr3	129118527	129118674	reg1035547.p1	3.822	+	TSC_hg19_v1_chr3_-_129118263 BC053996 AK093477	-337	-	TSC_hg19_v1_chr3_-_129035130 BC000426 NM_006026	-83500	-	TSC_hg19_v1_chr3_+_128997745 BC010125 BC050686 NM_001006109 BC009993	-120788	+	CU688234 AK127968 BC031104 BC066975 NM_207307	28812	-	AM180876 CR450305 CU680042 BC034463 U56254 U56428 TSC_hg19_v1_chr3_-_129158722 BC011752	40118	-	AK312878 TSC_hg19_v1_chr3_-_129158781 AF114784	40197	-	BC053996|RPL32P3|132241|ribosomal protein L32 pseudogene 3##AK093477|RPL32P3|132241|ribosomal protein L32 pseudogene 3##BC000426|H1FX|8971|H1 histone family, member X##NM_006026|H1FX|8971|H1 histone family, member X##BC010125|C3orf37|56941|chromosome 3 open reading frame 37##BC050686|C3orf37|56941|chromosome 3 open reading frame 37##NM_001006109|C3orf37|56941|chromosome 3 open reading frame 37##BC009993|C3orf37|56941|chromosome 3 open reading frame 37##AK127968|C3orf25|90288|chromosome 3 open reading frame 25##BC031104|C3orf25|90288|chromosome 3 open reading frame 25##BC066975|C3orf25|90288|chromosome 3 open reading frame 25##NM_207307|C3orf25|90288|chromosome 3 open reading frame 25##AM180876|MBD4|8930|methyl-CpG binding domain protein 4##CR450305|MBD4|8930|methyl-CpG binding domain protein 4##BC034463|MBD4|8930|methyl-CpG binding domain protein 4##BC011752|MBD4|8930|methyl-CpG binding domain protein 4##AK312878|MBD4|8930|methyl-CpG binding domain protein 4##AF114784|MBD4|8930|methyl-CpG binding domain protein 4	0.0	
chr3	161023276	161023393	reg1035517.p1	3.822	+	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-84213	+	AK225664 TSC_hg19_v1_chr3_+_160939097	-84238	+	AB050856 NM_033169 TSC_hg19_v1_chr3_-_160823138 AY359049 BC047618 AK223439 BC028571 AF154848 AK022491 AK095917 NM_001038628 NM_003781 NM_033167 NM_033168	-200397	-	AF458592 BC037817 NM_001040100	66474	-	NM_001080440	191261	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	3772944	-	AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK225664|NMD3|51068|NMD3 homolog (S. cerevisiae)##AB050856|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033169|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AY359049|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC047618|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK223439|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##BC028571|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF154848|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK022491|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AK095917|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_001038628|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_003781|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033167|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##NM_033168|B3GALNT1|8706|beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001080440|OTOL1|131149|otolin 1##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)	0.127916	
chr3	72545593	72545675	reg1039355.p2	3.822	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-711363	-	AK313656 NM_173359	-741711	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-742112	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	351914	-	BC017274 TSC_hg19_v1_chr3_-_72897575	351941	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	351958	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr6	64282476	64282657	reg1030084.p2	3.822	+	TSC_hg19_v1_chr6_+_64282463 BC023975	-23	+	TSC_hg19_v1_chr6_+_64282432 AK312526	-131	+	TSC_hg19_v1_chr6_+_64281913 BC045571 NM_003463	-650	+	TSC_hg19_v1_chr6_+_64286554 U48296 AB385532 CU692824 DQ890715 DQ893895 EU831599 EU831686 AB451314 AB451444	4044	+	TSC_hg19_v1_chr6_+_64345706 AK055678	63124	+	TSC_hg19_v1_chr6_+_64345719 AK307869	63150	+	BC023975|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AK312526|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##U48296|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##DQ890715|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##DQ893895|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##EU831599|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##EU831686|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AB451314|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AB451444|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AK055678|PHF3|23469|PHD finger protein 3##AK307869|PHF3|23469|PHD finger protein 3	0.0	
chr7	143424825	143424928	reg1033126.p1	3.822	+	NM_001130026 AK296318	-11926	+	BC113530 BC117233 NM_173678 AY167570 BC010225	-106334	+	BC041464 AK315909 NM_001130025 AK098041 AK297123 AL832734 BC033189	-106814	+	BC110410 BC043153 NM_178561	29930	-	AK299911 TSC_hg19_v1_chr7_-_143582416 NM_001206941	157538	-	TSC_hg19_v1_chr7_-_143599249 AB018281 NM_014719 BC000609 AK291605 AK001640 NM_001206938	174389	-	NM_001130026|FAM115C|285966|family with sequence similarity 115, member C##AK296318|FAM115C|285966|family with sequence similarity 115, member C##BC113530|FAM115C|285966|family with sequence similarity 115, member C##BC117233|FAM115C|285966|family with sequence similarity 115, member C##NM_173678|FAM115C|285966|family with sequence similarity 115, member C##AY167570|FAM115C|285966|family with sequence similarity 115, member C##BC010225|LOC154761|154761|uncharacterized LOC154761##BC041464|LOC154761|154761|uncharacterized LOC154761##NM_001130025|FAM115C|285966|family with sequence similarity 115, member C##AK098041|FAM115C|285966|family with sequence similarity 115, member C##AK297123|LOC154761|154761|uncharacterized LOC154761##AL832734|FAM115C|285966|family with sequence similarity 115, member C##BC033189|LOC154761|154761|uncharacterized LOC154761##BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_178561|CTAGE6P|340307|CTAGE family, member 6, pseudogene##AK299911|FAM115A|9747|family with sequence similarity 115, member A##NM_001206941|FAM115A|9747|family with sequence similarity 115, member A##AB018281|FAM115A|9747|family with sequence similarity 115, member A##NM_014719|FAM115A|9747|family with sequence similarity 115, member A##BC000609|FAM115A|9747|family with sequence similarity 115, member A##AK291605|FAM115A|9747|family with sequence similarity 115, member A##AK001640|FAM115A|9747|family with sequence similarity 115, member A##NM_001206938|FAM115A|9747|family with sequence similarity 115, member A	0.991667	CTCF.p2:1:0.992
chr9	140656810	140656882	reg1026810.p1	3.822	+	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	-18317	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-143379	+	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	-143403	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	115388	+	TSC_hg19_v1_chr9_+_140918045 AB209467	261228	+	TSC_hg19_v1_chr9_+_141044539 AK308459	387705	+	AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AK308459|TUBBP5|643224|tubulin, beta pseudogene 5	0.0	
chr11	35057573	35057665	reg1030385.p1	3.821	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-119462	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-119730	-	NM_001135024 NM_001166158 NM_003477	-119943	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	102781	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	103115	+	TSC_hg19_v1_chr11_+_35160821 M59040	103199	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr15	30231009	30231124	reg1034101.p2	3.821	+	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-116443	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-116724	-	NM_015307	-368140	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	454646	-	TSC_hg19_v1_chr15_+_30918372 BC071990	687320	+	BC105788 NM_001039841	687812	+	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B	0.723557	CTCF.p2:37:0.724
chr15	40353804	40353950	reg1029126.p1	3.821	+	TSC_hg19_v1_chr15_+_40331506 AK127696	-22399	+	AB451391 CU690086 TSC_hg19_v1_chr15_-_40331370 X73459 BC071716 U07857 BC100031 BC035495 BC051006 AB061546 NM_003134	-22525	-	TSC_hg19_v1_chr15_+_40294764 AK074361	-59081	+	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	44409	-	BC104983 BC104985 BC069328 BC069505 NM_033503 AK024472	44733	-	TSC_hg19_v1_chr15_-_40401076 BC060783 BC070043 NM_001003940	47218	-	AK127696|LOC100131089|100131089|uncharacterized LOC100131089##AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AK074361|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor##BC104983|BMF|90427|Bcl2 modifying factor##BC104985|BMF|90427|Bcl2 modifying factor##BC069328|BMF|90427|Bcl2 modifying factor##BC069505|BMF|90427|Bcl2 modifying factor##NM_033503|BMF|90427|Bcl2 modifying factor##AK024472|BMF|90427|Bcl2 modifying factor##BC060783|BMF|90427|Bcl2 modifying factor##BC070043|BMF|90427|Bcl2 modifying factor##NM_001003940|BMF|90427|Bcl2 modifying factor	0.0	
chr17	2239762	2239870	reg1031515.p1	3.821	+	AB463326 TSC_hg19_v1_chr17_-_2239749 AK026565	-72	-	TSC_hg19_v1_chr17_-_2239323 BC019090	-459	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	-32564	+	NM_018128 AB037822	922	-	TSC_hg19_v1_chr17_+_2240796 NM_014853 AB007857 NM_001098509 BC039204 AK294955 AB275762 AB385325 AB449878 AK304263	1086	+	X96401 NM_020310 TSC_hg19_v1_chr17_-_2304355 AK291596	64500	-	AK026565|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##BC019090|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase##NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##NM_014853|SGSM2|9905|small G protein signaling modulator 2##AB007857|SGSM2|9905|small G protein signaling modulator 2##NM_001098509|SGSM2|9905|small G protein signaling modulator 2##BC039204|SGSM2|9905|small G protein signaling modulator 2##AK294955|SGSM2|9905|small G protein signaling modulator 2##AB275762|SGSM2|9905|small G protein signaling modulator 2##AB449878|SGSM2|9905|small G protein signaling modulator 2##AK304263|SGSM2|9905|small G protein signaling modulator 2##X96401|MNT|4335|MAX binding protein##NM_020310|MNT|4335|MAX binding protein##AK291596|MNT|4335|MAX binding protein	0.042716	
chr17	25871569	25871681	reg1032066.p1	3.821	+	BC035488 BC042106 NM_014238	-72596	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-250344	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-250503	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	86543	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	86578	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	86603	+	BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.0	
chr2	109897336	109897434	reg1032410.p1	3.821	+	NM_001099289 DQ307286	-151322	+	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	-291638	-	TSC_hg19_v1_chr2_-_109605623 AK296936	-291766	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	474096	-	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	474340	-	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	474560	+	NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##AK296936|EDAR|10913|ectodysplasin A receptor##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57	0.055985	
chr3	8492475	8492588	reg1035666.p1	3.821	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	-1589633	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	-1589732	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-3263040	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	50799	-	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	50984	+	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	51050	+	X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK124088|LOC100288428|100288428|uncharacterized LOC100288428##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1	0.312974	CTCF.p2:30:0.313
chr4	6779699	6779799	reg1030696.p1	3.821	+	TSC_hg19_v1_chr4_+_6717915 BC067815 BC001818 AB464471 BC009890	-61827	+	AK002092 NM_018366 TSC_hg19_v1_chr4_+_6717894	-61881	+	AF155654 BC066897 NM_203462 TSC_hg19_v1_chr4_-_6711607	-68143	-	TSC_hg19_v1_chr4_+_6784458 NM_001100590 NM_014743	4706	+	TSC_hg19_v1_chr4_+_6784467 BC150286 D86985	4725	+	TSC_hg19_v1_chr4_+_6784518 AK124715 EF553521	4779	+	BC067815|CNO|55330|cappuccino homolog (mouse)##BC001818|CNO|55330|cappuccino homolog (mouse)##BC009890|CNO|55330|cappuccino homolog (mouse)##AK002092|CNO|55330|cappuccino homolog (mouse)##NM_018366|CNO|55330|cappuccino homolog (mouse)##AF155654|MRFAP1L1|114932|Morf4 family associated protein 1-like 1##BC066897|MRFAP1L1|114932|Morf4 family associated protein 1-like 1##NM_203462|MRFAP1L1|114932|Morf4 family associated protein 1-like 1##NM_001100590|KIAA0232|9778|KIAA0232##NM_014743|KIAA0232|9778|KIAA0232##BC150286|KIAA0232|9778|KIAA0232##D86985|KIAA0232|9778|KIAA0232##AK124715|KIAA0232|9778|KIAA0232##EF553521|KIAA0232|9778|KIAA0232	0.0	
chr4	79438304	79438455	reg1031715.p1	3.821	+	BC006366 TSC_hg19_v1_chr4_-_79103287	-335094	-	NM_001166133 NM_025074 TSC_hg19_v1_chr4_+_78978757 AK096838	-459639	+	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	-654465	+	NM_005139 TSC_hg19_v1_chr4_+_79472790	34391	+	TSC_hg19_v1_chr4_+_79472911 BC000871 AK313945	34529	+	TSC_hg19_v1_chr4_+_79697501 AL137661	259104	+	NM_001166133|FRAS1|80144|Fraser syndrome 1##NM_025074|FRAS1|80144|Fraser syndrome 1##AK096838|FRAS1|80144|Fraser syndrome 1##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1##NM_005139|ANXA3|306|annexin A3##BC000871|ANXA3|306|annexin A3##AK313945|ANXA3|306|annexin A3##AL137661|BMP2K|55589|BMP2 inducible kinase	0.963256	CTCF.p2:28:0.963
chr5	150080336	150080516	reg1024880.p2	3.821	+	AK313873 NM_001122853 NM_133371 AJ300586	-40004	+	Y11072 TSC_hg19_v1_chr5_+_150027841	-52585	+	TSC_hg19_v1_chr5_+_150020221 NM_001109974 NM_007286 AK290178 BC042624 BC146665 AB028952 BC152538 BC142683 AF499136 AF499137	-60133	+	AB463237 AM393639 TSC_hg19_v1_chr5_-_150080561 AK297019	141	-	AL136933 TSC_hg19_v1_chr5_-_150080619 BC003402 AK001152 NM_018047	206	-	AK125973 NM_001135644 AK299517	57687	-	AK313873|MYOZ3|91977|myozenin 3##NM_001122853|MYOZ3|91977|myozenin 3##NM_133371|MYOZ3|91977|myozenin 3##AJ300586|MYOZ3|91977|myozenin 3##Y11072|SYNPO|11346|synaptopodin##NM_001109974|SYNPO|11346|synaptopodin##NM_007286|SYNPO|11346|synaptopodin##AK290178|SYNPO|11346|synaptopodin##BC042624|SYNPO|11346|synaptopodin##BC146665|SYNPO|11346|synaptopodin##AB028952|SYNPO|11346|synaptopodin##BC152538|SYNPO|11346|synaptopodin##BC142683|SYNPO|11346|synaptopodin##AF499136|SYNPO|11346|synaptopodin##AF499137|SYNPO|11346|synaptopodin##AM393639|RBM22|55696|RNA binding motif protein 22##AK297019|RBM22|55696|RNA binding motif protein 22##AL136933|RBM22|55696|RNA binding motif protein 22##BC003402|RBM22|55696|RNA binding motif protein 22##AK001152|RBM22|55696|RNA binding motif protein 22##NM_018047|RBM22|55696|RNA binding motif protein 22##AK125973|DCTN4|51164|dynactin 4 (p62)##NM_001135644|DCTN4|51164|dynactin 4 (p62)##AK299517|DCTN4|51164|dynactin 4 (p62)	0.0	
chr5	55352780	55352914	reg1029872.p2	3.821	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-62084	-	NM_001242636 NM_001242639	-203698	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-205578	+	AK123389 NM_024669	176338	-	NM_005921	758052	+	TSC_hg19_v1_chr5_+_56111375 AK307828	758517	+	BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr5	77565097	77565227	reg1035786.p1	3.821	+	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	-493030	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	-630648	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	-630733	-	BC113045 CU691576 DQ894915 EU176289 TSC_hg19_v1_chr5_-_77590458 AK225908 U91931	25263	-	TSC_hg19_v1_chr5_-_77590488 AY623424 AK303300	25315	-	TSC_hg19_v1_chr5_-_77590495 U81504	25330	-	BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##EU446696|OTP|23440|orthopedia homeobox##DQ894915|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##EU176289|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK225908|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U91931|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AY623424|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##AK303300|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit##U81504|AP3B1|8546|adaptor-related protein complex 3, beta 1 subunit	0.168445	
chr7	39989644	39989803	reg1033865.p1	3.821	+	TSC_hg19_v1_chr7_+_39989642 BC080601	-97	+	TSC_hg19_v1_chr7_+_39773192 BC038571	-216491	+	TSC_hg19_v1_chr7_+_39663298 AK308109	-326415	+	BC064414 TSC_hg19_v1_chr7_+_39989879	161	+	TSC_hg19_v1_chr7_+_39989958 AK092534 NM_003718 NM_031267	236	+	AJ297709 AJ297710 TSC_hg19_v1_chr7_+_39990171	418	+	BC080601|CDK13|8621|cyclin-dependent kinase 13##BC038571|LINC00265|349114|long intergenic non-protein coding RNA 265##AK308109|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##AK092534|CDK13|8621|cyclin-dependent kinase 13##NM_003718|CDK13|8621|cyclin-dependent kinase 13##NM_031267|CDK13|8621|cyclin-dependent kinase 13##AJ297709|CDK13|8621|cyclin-dependent kinase 13##AJ297710|CDK13|8621|cyclin-dependent kinase 13	0.0	
chr9	95916719	95916802	reg1029664.p1	3.821	+	BT007164 CU690562 U72661 U91512 BC019336 BC004440 BC000298 TSC_hg19_v1_chr9_-_95896534 BC048212 NM_004148	-20218	-	BC091476 TSC_hg19_v1_chr9_+_95858566	-58181	+	NM_032310 TSC_hg19_v1_chr9_+_95858498 AK057716 AK091611 AX747094 BC042201 BC038856 BC004500	-58280	+	AJ242724 NM_006648 AB051547 AB463351	30472	+	NM_001098808 TSC_hg19_v1_chr9_-_96108726	191950	-	BC080634 TSC_hg19_v1_chr9_-_96213799 BC037551 BC063650 BC038803	297028	-	BT007164|NINJ1|4814|ninjurin 1##U72661|NINJ1|4814|ninjurin 1##U91512|NINJ1|4814|ninjurin 1##BC019336|NINJ1|4814|ninjurin 1##BC004440|NINJ1|4814|ninjurin 1##BC000298|NINJ1|4814|ninjurin 1##BC048212|NINJ1|4814|ninjurin 1##NM_004148|NINJ1|4814|ninjurin 1##BC091476|C9orf89|84270|chromosome 9 open reading frame 89##NM_032310|C9orf89|84270|chromosome 9 open reading frame 89##AK057716|C9orf89|84270|chromosome 9 open reading frame 89##AK091611|C9orf89|84270|chromosome 9 open reading frame 89##BC042201|C9orf89|84270|chromosome 9 open reading frame 89##BC038856|C9orf89|84270|chromosome 9 open reading frame 89##BC004500|C9orf89|84270|chromosome 9 open reading frame 89##AJ242724|WNK2|65268|WNK lysine deficient protein kinase 2##NM_006648|WNK2|65268|WNK lysine deficient protein kinase 2##AB051547|WNK2|65268|WNK lysine deficient protein kinase 2##NM_001098808|C9orf129|445577|chromosome 9 open reading frame 129##BC080634|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC037551|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC063650|FAM120AOS|158293|family with sequence similarity 120A opposite strand##BC038803|FAM120AOS|158293|family with sequence similarity 120A opposite strand	0.179989	
chr10	31411451	31411547	reg1038394.p2	3.820	+	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	-90678	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	-123047	-	AF139543 BC066294 NM_183058	-492864	-	TSC_hg19_v1_chr10_+_31607451 BX647794	195937	+	AK296146 BC042008 TSC_hg19_v1_chr10_-_31607991	196458	-	TSC_hg19_v1_chr10_+_31608113 NM_001174093 NM_001174095 NM_001174096 NM_030751 AK091478 AK299541 AK307510 AX747011 AK310924 AK311137 AK314683 U12170 AK308822 AL831979 BC009572 BC065705 BC112392 BC107781 AK300830 D15050 AB384934	196634	+	BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1##AK296146|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##BC042008|ZEB1-AS1|220930|ZEB1 antisense RNA 1 (non-protein coding)##NM_001174093|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174095|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_001174096|ZEB1|6935|zinc finger E-box binding homeobox 1##NM_030751|ZEB1|6935|zinc finger E-box binding homeobox 1##AK091478|ZEB1|6935|zinc finger E-box binding homeobox 1##AK299541|ZEB1|6935|zinc finger E-box binding homeobox 1##AK307510|ZEB1|6935|zinc finger E-box binding homeobox 1##AK310924|ZEB1|6935|zinc finger E-box binding homeobox 1##AK311137|ZEB1|6935|zinc finger E-box binding homeobox 1##AK314683|ZEB1|6935|zinc finger E-box binding homeobox 1##U12170|ZEB1|6935|zinc finger E-box binding homeobox 1##AK308822|ZEB1|6935|zinc finger E-box binding homeobox 1##AL831979|ZEB1|6935|zinc finger E-box binding homeobox 1##BC009572|ZEB1|6935|zinc finger E-box binding homeobox 1##BC065705|ZEB1|6935|zinc finger E-box binding homeobox 1##BC112392|ZEB1|6935|zinc finger E-box binding homeobox 1##BC107781|ZEB1|6935|zinc finger E-box binding homeobox 1##AK300830|ZEB1|6935|zinc finger E-box binding homeobox 1	0.0	
chr11	1092851	1092948	reg1038556.p1	3.820	+	TSC_hg19_v1_chr11_+_1074873 L21998 NM_002457	-18027	+	AY458429 AY312160 NM_005961 TSC_hg19_v1_chr11_-_1036715	-56213	-	TSC_hg19_v1_chr11_-_1017140 AK096772	-75692	-	TSC_hg19_v1_chr11_+_1151579 AF015521 AJ298317 AF043909	58687	+	TSC_hg19_v1_chr11_+_1213469 Z48314	120575	+	TSC_hg19_v1_chr11_+_1244295 NM_002458 AK310939	151397	+	L21998|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##NM_002457|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##AY458429|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AY312160|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##NM_005961|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AK096772|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AF015521|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AJ298317|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AF043909|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##Z48314|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##NM_002458|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##AK310939|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming	0.0	
chr1	156478217	156478398	reg1035531.p1	3.820	+	AK310187 TSC_hg19_v1_chr1_-_156470568	-7739	-	TSC_hg19_v1_chr1_-_156470563 BC018985 BC032479 AB210005 BC064988	-7757	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	-7789	-	AY253300 TSC_hg19_v1_chr1_-_156542352 AB105103 BC131536 BC033549 NM_178229	64055	-	NM_001105669	71211	+	TSC_hg19_v1_chr1_+_156561567 AK294835 AK298222 BC056917 NM_144772 AJ315849 BC100931 BC100932 BC100933 BC100934	83248	+	AK310187|MEF2D|4209|myocyte enhancer factor 2D##BC018985|MEF2D|4209|myocyte enhancer factor 2D##BC032479|MEF2D|4209|myocyte enhancer factor 2D##AB210005|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D##AY253300|IQGAP3|128239|IQ motif containing GTPase activating protein 3##AB105103|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC131536|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC033549|IQGAP3|128239|IQ motif containing GTPase activating protein 3##NM_178229|IQGAP3|128239|IQ motif containing GTPase activating protein 3##NM_001105669|TTC24|164118|tetratricopeptide repeat domain 24##AK294835|APOA1BP|128240|apolipoprotein A-I binding protein##AK298222|APOA1BP|128240|apolipoprotein A-I binding protein##BC056917|APOA1BP|128240|apolipoprotein A-I binding protein##NM_144772|APOA1BP|128240|apolipoprotein A-I binding protein##AJ315849|APOA1BP|128240|apolipoprotein A-I binding protein##BC100931|APOA1BP|128240|apolipoprotein A-I binding protein##BC100932|APOA1BP|128240|apolipoprotein A-I binding protein##BC100933|APOA1BP|128240|apolipoprotein A-I binding protein##BC100934|APOA1BP|128240|apolipoprotein A-I binding protein	0.0	
chr11	66812946	66813034	reg1031181.p2	3.820	+	NM_177963 AK289672 AK289727 BC037406	-22138	+	AK315810 NM_001177880	-22801	+	AK026328 NM_001136485	-70240	+	TSC_hg19_v1_chr11_+_66824285 NM_014578	11296	+	TSC_hg19_v1_chr11_+_66824317 BC001338 AF498973 CU674656 DQ891124 DQ894303	11350	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	73749	+	NM_177963|SYT12|91683|synaptotagmin XII##AK289672|SYT12|91683|synaptotagmin XII##AK289727|SYT12|91683|synaptotagmin XII##BC037406|SYT12|91683|synaptotagmin XII##AK315810|SYT12|91683|synaptotagmin XII##NM_001177880|SYT12|91683|synaptotagmin XII##AK026328|C11orf86|254439|chromosome 11 open reading frame 86##NM_001136485|C11orf86|254439|chromosome 11 open reading frame 86##NM_014578|RHOD|29984|ras homolog gene family, member D##BC001338|RHOD|29984|ras homolog gene family, member D##AF498973|RHOD|29984|ras homolog gene family, member D##DQ891124|RHOD|29984|ras homolog gene family, member D##DQ894303|RHOD|29984|ras homolog gene family, member D##BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A	0.0	
chr20	56007901	56008042	reg1032681.p1	3.820	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-41514	+	NM_001190472	-73094	-	AK292247 AY349350 NM_001015885	-81370	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	92230	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	128186	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	187567	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.0	
chr3	15419606	15419743	reg1004482.p1	3.820	+	BC006169 NM_001018009	-36787	-	TSC_hg19_v1_chr3_-_15374094 AL117422 AK313167 NM_004844	-45577	-	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	-45733	-	TSC_hg19_v1_chr3_-_15469037 BC022400 AK057791 NM_152396 AK293370	49344	-	TSC_hg19_v1_chr3_+_15469073 NM_033083 AK312330 AK304697 BC041329 AF272973 CU691982	49494	+	AK128401 NM_080538	120704	-	BC006169|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_001018009|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AL117422|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AK313167|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##NM_004844|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC022400|METTL6|131965|methyltransferase like 6##AK057791|METTL6|131965|methyltransferase like 6##NM_152396|METTL6|131965|methyltransferase like 6##AK293370|METTL6|131965|methyltransferase like 6##NM_033083|EAF1|85403|ELL associated factor 1##AK312330|EAF1|85403|ELL associated factor 1##AK304697|EAF1|85403|ELL associated factor 1##BC041329|EAF1|85403|ELL associated factor 1##AF272973|EAF1|85403|ELL associated factor 1##AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase	0.0	
chr3	57127643	57127772	reg1036344.p1	3.820	+	AF433662 AK302493 NM_001128615	-14394	-	AY221117 NM_181727 BC126274 BC136498	-33204	+	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	-291796	-	AF458067 TSC_hg19_v1_chr3_-_57199347	71626	-	AF494208 NM_017563 TSC_hg19_v1_chr3_-_57199413	71703	-	NM_003865	106572	-	AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12##AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF458067|IL17RD|54756|interleukin 17 receptor D##AF494208|IL17RD|54756|interleukin 17 receptor D##NM_017563|IL17RD|54756|interleukin 17 receptor D##NM_003865|HESX1|8820|HESX homeobox 1	0.354507	CTCF.p2:-1:0.355
chr7	116870601	116870781	reg1030008.p1	3.820	+	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	-210326	+	TSC_hg19_v1_chr7_+_116660271 AK093212	-210424	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	-277118	+	BC078170 AK056742 NM_003391 X07876	92644	-	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	196854	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	249347	+	AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##AK093212|ST7|7982|suppression of tumorigenicity 7##AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	0.0	
chr9	20684221	20684329	reg1031299.p2	3.820	+	AK056522 AY139834 NM_017794	-25968	+	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	-61779	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	-61827	-	BC114215 TSC_hg19_v1_chr9_-_21031636 BX648779 NM_001010915	347356	-	AB451491 AB451323 AB451452 BC069314 BC096150 BC096151 BC096152 BC096153 V00547 AB587428 V00546 M25460 M28622 NM_002176	393598	-	NM_002177	457868	-	AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC114215|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##BX648779|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##NM_001010915|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##AB451323|IFNB1|3456|interferon, beta 1, fibroblast##AB451452|IFNB1|3456|interferon, beta 1, fibroblast##BC069314|IFNB1|3456|interferon, beta 1, fibroblast##BC096150|IFNB1|3456|interferon, beta 1, fibroblast##BC096151|IFNB1|3456|interferon, beta 1, fibroblast##BC096152|IFNB1|3456|interferon, beta 1, fibroblast##BC096153|IFNB1|3456|interferon, beta 1, fibroblast##V00547|IFNB1|3456|interferon, beta 1, fibroblast##V00546|IFNB1|3456|interferon, beta 1, fibroblast##M25460|IFNB1|3456|interferon, beta 1, fibroblast##M28622|IFNB1|3456|interferon, beta 1, fibroblast##NM_002176|IFNB1|3456|interferon, beta 1, fibroblast##NM_002177|IFNW1|3467|interferon, omega 1	0.0	
chr10	48444796	48444863	reg1046562.p1	3.819	+	D49492 AK315322 AK310360 BC028237 NM_004962 TSC_hg19_v1_chr10_-_48439183	-5750	-	EU446620 EU446952 BC074921 BC069643 TSC_hg19_v1_chr10_-_48416877 AF188285 NM_016204 AK314956	-28043	-	J03912 CU691778 BC039844 AB593121 M22453 NM_002900 DQ426897	-53894	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	362094	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	382780	-	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	383113	-	D49492|GDF10|2662|growth differentiation factor 10##AK315322|GDF10|2662|growth differentiation factor 10##AK310360|GDF10|2662|growth differentiation factor 10##BC028237|GDF10|2662|growth differentiation factor 10##NM_004962|GDF10|2662|growth differentiation factor 10##EU446620|GDF2|2658|growth differentiation factor 2##EU446952|GDF2|2658|growth differentiation factor 2##BC074921|GDF2|2658|growth differentiation factor 2##BC069643|GDF2|2658|growth differentiation factor 2##AF188285|GDF2|2658|growth differentiation factor 2##NM_016204|GDF2|2658|growth differentiation factor 2##AK314956|GDF2|2658|growth differentiation factor 2##J03912|RBP3|5949|retinol binding protein 3, interstitial##BC039844|RBP3|5949|retinol binding protein 3, interstitial##AB593121|RBP3|5949|retinol binding protein 3, interstitial##M22453|RBP3|5949|retinol binding protein 3, interstitial##NM_002900|RBP3|5949|retinol binding protein 3, interstitial##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B	0.0	
chr11	61875431	61875514	reg1005881.p1	3.819	+	TSC_hg19_v1_chr11_+_61735277 AK093779 AX748301 BC132894 BC132896	-140138	+	TSC_hg19_v1_chr11_-_61735173 NM_002032	-140325	-	BC020300 BC015946 BC063514 TSC_hg19_v1_chr11_-_61735103 BC011359 BC070494 AB062402 BC013724 BC073750 BC000857 BC035441 AK307190 AK311818 BC016009 BC066341 BC066961 BC104643 BC105802 L20941 D28463	-140385	-	TSC_hg19_v1_chr11_+_61891482 AK307633 BC098576 NM_001040694 NM_020238 AK056195 AK310714 BC032678	16000	+	BC062693 AJ224171 BC069170 BC069289 NM_006552	82226	+	AF071219 NM_002407 BC062218 AJ224173	100679	+	AK093779|LOC399900|399900|uncharacterized LOC399900##BC132894|LOC399900|399900|uncharacterized LOC399900##BC132896|LOC399900|399900|uncharacterized LOC399900##NM_002032|FTH1|2495|ferritin, heavy polypeptide 1##BC020300|FTH1|2495|ferritin, heavy polypeptide 1##BC015946|FTH1|2495|ferritin, heavy polypeptide 1##BC063514|FTH1|2495|ferritin, heavy polypeptide 1##BC011359|FTH1|2495|ferritin, heavy polypeptide 1##BC070494|FTH1|2495|ferritin, heavy polypeptide 1##AB062402|FTH1|2495|ferritin, heavy polypeptide 1##BC013724|FTH1|2495|ferritin, heavy polypeptide 1##BC073750|FTH1|2495|ferritin, heavy polypeptide 1##BC000857|FTH1|2495|ferritin, heavy polypeptide 1##BC035441|FTH1|2495|ferritin, heavy polypeptide 1##AK307190|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK311818|FTH1|2495|ferritin, heavy polypeptide 1##BC016009|FTH1|2495|ferritin, heavy polypeptide 1##BC066341|FTH1|2495|ferritin, heavy polypeptide 1##BC066961|FTH1|2495|ferritin, heavy polypeptide 1##BC104643|FTH1|2495|ferritin, heavy polypeptide 1##BC105802|FTH1|2495|ferritin, heavy polypeptide 1##L20941|FTH1|2495|ferritin, heavy polypeptide 1##D28463|FTH1|2495|ferritin, heavy polypeptide 1##AK307633|INCENP|3619|inner centromere protein antigens 135/155kDa##BC098576|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_001040694|INCENP|3619|inner centromere protein antigens 135/155kDa##NM_020238|INCENP|3619|inner centromere protein antigens 135/155kDa##AK056195|INCENP|3619|inner centromere protein antigens 135/155kDa##AK310714|INCENP|3619|inner centromere protein antigens 135/155kDa##BC032678|INCENP|3619|inner centromere protein antigens 135/155kDa##BC062693|SCGB1D1|10648|secretoglobin, family 1D, member 1##AJ224171|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069170|SCGB1D1|10648|secretoglobin, family 1D, member 1##BC069289|SCGB1D1|10648|secretoglobin, family 1D, member 1##NM_006552|SCGB1D1|10648|secretoglobin, family 1D, member 1##AF071219|SCGB2A1|4246|secretoglobin, family 2A, member 1##NM_002407|SCGB2A1|4246|secretoglobin, family 2A, member 1##BC062218|SCGB2A1|4246|secretoglobin, family 2A, member 1##AJ224173|SCGB2A1|4246|secretoglobin, family 2A, member 1	0.0	
chr1	25365839	25365959	reg1033336.p1	3.819	+	BC013362 AK310945 NM_001031680 AF022726	-74357	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-109113	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-109160	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	193088	-	BC065040 TSC_hg19_v1_chr1_-_25573922	208024	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	208074	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.501294	CTCF.p2:-73:0.478
chr1	38869481	38869582	reg1027634.p1	3.819	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-357082	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-391101	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-391146	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	455855	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	469485	-	AK312811 BC051675 AK123051 NM_030772	477746	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.807485	CTCF.p2:8:0.807
chr14	45625398	45625496	reg1031289.p2	3.819	+	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-20258	+	AK093422 AX748116 TSC_hg19_v1_chr14_+_45605142	-20305	+	TSC_hg19_v1_chr14_+_45605134 NM_020937 BC036056	-20322	+	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	96920	-	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	97199	-	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	1495536	-	DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AK093422|FANCM|57697|Fanconi anemia, complementation group M##NM_020937|FANCM|57697|Fanconi anemia, complementation group M##BC036056|FANCM|57697|Fanconi anemia, complementation group M##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like	0.079145	
chr15	28806860	28806968	reg1041199.p2	3.819	+	AF071172 BC015486 BC142951 BC045544 NM_004667	-239643	-	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	-462481	-	NM_033223 BC029850 BC045709 S82769	-1590367	+	TSC_hg19_v1_chr15_+_29033278 AK302529	226409	+	TSC_hg19_v1_chr15_+_29077475 BC018626	270568	+	NM_001130414 NM_005503 AF047348 BC082986	406935	+	AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2##M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2	0.79594	CTCF.p2:-5:0.796
chr1	59612869	59612999	reg1025072.p2	3.819	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-363199	-	TSC_hg19_v1_chr1_-_59248287 BC009874	-364569	-	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-447182	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	149678	+	NM_001244714 AK054842	162819	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	667718	+	BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##BC009874|JUN|3725|jun proto-oncogene##BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)	0.0	
chr2	9877511	9877640	reg1029767.p1	3.819	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-106450	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	-106526	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	-106962	-	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	106045	+	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	214275	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	306217	+	NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11	0.01697	
chr6	157009444	157009625	reg1034521.p1	3.819	+	AF190122 NM_015718	-1232498	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1373911	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1373949	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	89529	+	TSC_hg19_v1_chr6_+_157099206 AB587572	89691	+	TSC_hg19_v1_chr6_+_157099283 AF521671	89750	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.015436	
chr6_qbl_hap6	2343548	2343616	reg1042891.p1	3.819	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.930569	CTCF.p2:-1:0.931
chr7	158200769	158200835	reg1039308.p1	3.819	+	TSC_hg19_v1_chr7_+_157647233 BC034557	-553528	+	TSC_hg19_v1_chr7_+_157129699 AK301152 AK223601 BC110289 AK297796 AL136707 NM_005494 BC002446 NM_058246 AB209859 AB015798 AB015799 AF060703 AK297497 BC000177 EU075177 AK291953 AK293025 AF075601 AF080569 AK297989 AB014888	-1071091	+	TSC_hg19_v1_chr7_+_157023934 AK098447	-1176796	+	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	179651	-	BC028618 TSC_hg19_v1_chr7_-_158497496 AK092008 AX747307 BC043404 BX537845 NM_017760	296675	-	TSC_hg19_v1_chr7_-_158611303 AK126214	410568	-	BC034557|LOC100506585|100506585|uncharacterized LOC100506585##AK301152|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK223601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC110289|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297796|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AL136707|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_005494|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC002446|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##NM_058246|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB209859|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015798|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB015799|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF060703|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK297497|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##BC000177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##EU075177|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK291953|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AK293025|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF075601|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AF080569|TMEM135|65084|transmembrane protein 135##AK297989|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##AB014888|DNAJB6|10049|DnaJ (Hsp40) homolog, subfamily B, member 6##DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC028618|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK092008|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BC043404|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BX537845|NCAPG2|54892|non-SMC condensin II complex, subunit G2##NM_017760|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK126214|ESYT2|57488|extended synaptotagmin-like protein 2	0.979463	CTCF.p2:23:0.979
chr9	128209071	128209138	reg1035018.p1	3.819	+	TSC_hg19_v1_chr9_+_128024122 AK056493 NM_015635 AB040954 BC114937 BC114962	-184955	+	TSC_hg19_v1_chr9_+_128024104 BC110990	-185000	+	TSC_hg19_v1_chr9_+_128024097 AK296381	-185006	+	TSC_hg19_v1_chr9_-_128469297 M37191	260206	-	TSC_hg19_v1_chr9_-_128469466 AK290060	260363	-	AL833042 TSC_hg19_v1_chr9_-_128469485 AY633624 AY633625 AY633626 BC002326 BC003044	260375	-	AK056493|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##NM_015635|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AB040954|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114937|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114962|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC110990|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AK296381|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##M37191|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AK290060|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AL833042|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633624|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633625|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633626|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC002326|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC003044|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1	0.0	
chrX	56800059	56800194	reg1013494.p2	3.819	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-44435	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-210075	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-541216	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	221845	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	347802	-	BC071694 NM_019003	363931	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.0	
chr11	131898434	131898615	reg1003943.p1	3.818	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-117185	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-117900	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-658055	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	914490	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	915081	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	1503790	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.0	
chr1	154746761	154746928	reg1036140.p1	3.818	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-146379	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-146430	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-166144	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	85418	-	BX649146 TSC_hg19_v1_chr1_-_154840541	93657	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	95902	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.0	
chr12	50505438	50505558	reg1037239.p1	3.818	+	AK130162 TSC_hg19_v1_chr12_+_50497790 BC032234 NM_005276 AK295911 L34041 AK312516 DQ890626 DQ893793 CU689308	-7687	+	TSC_hg19_v1_chr12_+_50479124 AK292700 AK293932 AK130517 AB527887 CU679327 EU447009 BC000063 AF109733	-26385	+	TSC_hg19_v1_chr12_+_50479018 NM_003076 NM_139071 U66617 BC009368	-26511	+	TSC_hg19_v1_chr12_+_50506018 BC007849 NM_032901 AK312180	418	+	AB527479 TSC_hg19_v1_chr12_-_50561095 AK294521 BC014637 AK300937 NM_147190 BC033558	55593	-	TSC_hg19_v1_chr12_-_50561112 AK026014	55627	-	AK130162|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##BC032234|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##NM_005276|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##AK295911|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##L34041|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##AK312516|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##DQ890626|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##DQ893793|GPD1|2819|glycerol-3-phosphate dehydrogenase 1 (soluble)##AK292700|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK293932|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AK130517|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##EU447009|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC000063|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##AF109733|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##NM_003076|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##NM_139071|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##U66617|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC009368|SMARCD1|6602|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1##BC007849|C12orf62|84987|chromosome 12 open reading frame 62##NM_032901|C12orf62|84987|chromosome 12 open reading frame 62##AK312180|C12orf62|84987|chromosome 12 open reading frame 62##AK294521|CERS5|91012|ceramide synthase 5##BC014637|CERS5|91012|ceramide synthase 5##AK300937|CERS5|91012|ceramide synthase 5##NM_147190|CERS5|91012|ceramide synthase 5##BC033558|CERS5|91012|ceramide synthase 5##AK026014|CERS5|91012|ceramide synthase 5	0.131604	
chr15	40347293	40347455	reg1026341.p2	3.818	+	TSC_hg19_v1_chr15_+_40331506 AK127696	-15896	+	AB451391 CU690086 TSC_hg19_v1_chr15_-_40331370 X73459 BC071716 U07857 BC100031 BC035495 BC051006 AB061546 NM_003134	-16022	-	TSC_hg19_v1_chr15_+_40294764 AK074361	-52578	+	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	50912	-	BC104983 BC104985 BC069328 BC069505 NM_033503 AK024472	51236	-	TSC_hg19_v1_chr15_-_40401076 BC060783 BC070043 NM_001003940	53721	-	AK127696|LOC100131089|100131089|uncharacterized LOC100131089##AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AK074361|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor##BC104983|BMF|90427|Bcl2 modifying factor##BC104985|BMF|90427|Bcl2 modifying factor##BC069328|BMF|90427|Bcl2 modifying factor##BC069505|BMF|90427|Bcl2 modifying factor##NM_033503|BMF|90427|Bcl2 modifying factor##AK024472|BMF|90427|Bcl2 modifying factor##BC060783|BMF|90427|Bcl2 modifying factor##BC070043|BMF|90427|Bcl2 modifying factor##NM_001003940|BMF|90427|Bcl2 modifying factor	0.0	
chr15	75162528	75162656	reg1036548.p2	3.818	+	TSC_hg19_v1_chr15_-_75135524 BC157884 NM_001099436 AL117482	-26987	-	TSC_hg19_v1_chr15_-_75135498 AK293181 BC036117	-27092	-	BC048289 TSC_hg19_v1_chr15_-_75135479	-27113	-	CR456800 AF005038 TSC_hg19_v1_chr15_-_75165693 AK315516 BC001376 BC004385 NM_005697 AK096794 AK096376 AK291884	3063	-	TSC_hg19_v1_chr15_+_75182388 AK294030 AK301370 AK302354 BX648475 AF504648 AK225149 BC046357 AK292374 BC017351 NM_002435 X76057 CU692334 AB529030	19800	+	AK025373 TSC_hg19_v1_chr15_-_75194610	31984	-	BC157884|ULK3|25989|unc-51-like kinase 3 (C. elegans)##NM_001099436|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AL117482|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK293181|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC036117|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC048289|ULK3|25989|unc-51-like kinase 3 (C. elegans)##CR456800|SCAMP2|10066|secretory carrier membrane protein 2##AF005038|SCAMP2|10066|secretory carrier membrane protein 2##AK315516|SCAMP2|10066|secretory carrier membrane protein 2##BC001376|SCAMP2|10066|secretory carrier membrane protein 2##BC004385|SCAMP2|10066|secretory carrier membrane protein 2##NM_005697|SCAMP2|10066|secretory carrier membrane protein 2##AK096794|SCAMP2|10066|secretory carrier membrane protein 2##AK096376|SCAMP2|10066|secretory carrier membrane protein 2##AK291884|SCAMP2|10066|secretory carrier membrane protein 2##AK294030|MPI|4351|mannose phosphate isomerase##AK301370|MPI|4351|mannose phosphate isomerase##AK302354|MPI|4351|mannose phosphate isomerase##BX648475|MPI|4351|mannose phosphate isomerase##AF504648|MPI|4351|mannose phosphate isomerase##AK225149|MPI|4351|mannose phosphate isomerase##BC046357|MPI|4351|mannose phosphate isomerase##AK292374|MPI|4351|mannose phosphate isomerase##BC017351|MPI|4351|mannose phosphate isomerase##NM_002435|MPI|4351|mannose phosphate isomerase##X76057|MPI|4351|mannose phosphate isomerase##AK025373|C15orf17|57184|chromosome 15 open reading frame 17	0.0	
chr17	78875111	78875277	reg1035514.p2	3.818	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-356376	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-356545	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-424867	-	TSC_hg19_v1_chr17_+_78935064 BC073898	59938	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	90447	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	90500	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.0	
chr20	1420826	1420914	reg1033583.p1	3.818	+	TSC_hg19_v1_chr20_-_1373754 BC119733 BC119732 NM_000801 NM_001199786 NM_054014	-47088	-	TSC_hg19_v1_chr20_-_1373733 D28444 M34539 AK309026	-47148	-	TSC_hg19_v1_chr20_-_1373659 AF205192 AB241123 AB241124 AB241125 BT007066 CR407613 CR542168 DQ891819 AB463639 X52220 BC005147 BC001925	-47238	-	TSC_hg19_v1_chr20_-_1447490 AB590363 CU678204 DQ893189 DQ896513 AK001511 AF078856 AF086909 AF112211 AK223334 AK297403 AK315433 AF283774 AK223341	26607	-	TSC_hg19_v1_chr20_-_1447590 BC002801	26737	-	AK093845 NM_001206736 NM_016143 NM_018839	27466	-	BC119733|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC119732|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_000801|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_001199786|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_054014|FKBP1A|2280|FK506 binding protein 1A, 12kDa##D28444|FKBP1A|2280|FK506 binding protein 1A, 12kDa##M34539|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AK309026|FKBP1A-SDCBP2|100528031|FKBP1A-SDCBP2 readthrough (non-protein coding)##AF205192|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241123|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241124|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241125|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BT007066|FKBP1A|2280|FK506 binding protein 1A, 12kDa##CR407613|FKBP1A|2280|FK506 binding protein 1A, 12kDa##CR542168|FKBP1A|2280|FK506 binding protein 1A, 12kDa##DQ891819|FKBP1A|2280|FK506 binding protein 1A, 12kDa##X52220|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC005147|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC001925|FKBP1A|2280|FK506 binding protein 1A, 12kDa##DQ893189|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##DQ896513|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK001511|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF078856|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF086909|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF112211|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223334|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK297403|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK315433|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF283774|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223341|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##BC002801|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK093845|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_001206736|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_016143|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_018839|NSFL1C|55968|NSFL1 (p97) cofactor (p47)	0.043762	
chr20	308100	308185	reg1032015.p2	3.818	+	TSC_hg19_v1_chr20_+_306226 BC067361 NM_006943 U35612 BC028103	-1906	+	TSC_hg19_v1_chr20_+_278213 BC069238 NM_033089 AK025768 BC107584 BC036469	-29933	+	AK302223 TSC_hg19_v1_chr20_-_271367 BC134417 BC137450 BC144648 BC144649 AK097394 NM_080571 NM_153269	-36778	-	TSC_hg19_v1_chr20_+_327371 NM_024958 AK290527	19263	+	TSC_hg19_v1_chr20_+_327754 AK026982	19607	+	AY247738 NM_021158 TSC_hg19_v1_chr20_+_361483 AJ697936 AK026945 AK222837 BC027484	53271	+	BC067361|SOX12|6666|SRY (sex determining region Y)-box 12##NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12##U35612|SOX12|6666|SRY (sex determining region Y)-box 12##BC028103|SOX12|6666|SRY (sex determining region Y)-box 12##BC069238|ZCCHC3|85364|zinc finger, CCHC domain containing 3##NM_033089|ZCCHC3|85364|zinc finger, CCHC domain containing 3##AK025768|ZCCHC3|85364|zinc finger, CCHC domain containing 3##BC107584|ZCCHC3|85364|zinc finger, CCHC domain containing 3##BC036469|ZCCHC3|85364|zinc finger, CCHC domain containing 3##AK302223|C20orf96|140680|chromosome 20 open reading frame 96##BC134417|C20orf96|140680|chromosome 20 open reading frame 96##BC137450|C20orf96|140680|chromosome 20 open reading frame 96##BC144648|C20orf96|140680|chromosome 20 open reading frame 96##BC144649|C20orf96|140680|chromosome 20 open reading frame 96##AK097394|C20orf96|140680|chromosome 20 open reading frame 96##NM_080571|C20orf96|140680|chromosome 20 open reading frame 96##NM_153269|C20orf96|140680|chromosome 20 open reading frame 96##NM_024958|NRSN2|80023|neurensin 2##AK290527|NRSN2|80023|neurensin 2##AK026982|NRSN2|80023|neurensin 2##AY247738|TRIB3|57761|tribbles homolog 3 (Drosophila)##NM_021158|TRIB3|57761|tribbles homolog 3 (Drosophila)##AJ697936|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK026945|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK222837|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC027484|TRIB3|57761|tribbles homolog 3 (Drosophila)	0.0	
chr2	105796336	105796435	reg1036728.p1	3.818	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	-141871	+	TSC_hg19_v1_chr2_+_105471877 NM_006236	-324487	+	TSC_hg19_v1_chr2_-_105467912 AK096498	-328469	-	BC066879 BC066880 BC067455 NM_007227 CU688176 EU883573	61872	+	TSC_hg19_v1_chr2_-_105946156 BC020548 BC010093 NM_001142621 NM_004257	149767	-	AK304268 TSC_hg19_v1_chr2_+_105953980 AK307891	157525	+	NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9##NM_006236|POU3F3|5455|POU class 3 homeobox 3##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##BC066879|GPR45|11250|G protein-coupled receptor 45##BC066880|GPR45|11250|G protein-coupled receptor 45##BC067455|GPR45|11250|G protein-coupled receptor 45##NM_007227|GPR45|11250|G protein-coupled receptor 45##EU883573|GPR45|11250|G protein-coupled receptor 45##BC020548|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_001142621|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_004257|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##AK304268|C2orf49|79074|chromosome 2 open reading frame 49##AK307891|C2orf49|79074|chromosome 2 open reading frame 49	0.019183	
chr21	35720145	35720326	reg1005255.p1	3.818	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	-274306	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	-274394	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-432143	-	AF302095 DQ192290 NM_172201 BC112087 BC093892	16111	+	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	27590	+	AY789480 NM_001127670 EU008570	107837	-	AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1	0.0	
chr5	75699718	75699834	reg1021502.p3	3.818	+	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	-660	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-320505	+	TSC_hg19_v1_chr5_-_75013228 BC010695 AK296071 BC065750 AK311296 BC050459 NM_001099271	-686516	-	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	219369	-	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	312180	+	NM_005242 BC018130 TSC_hg19_v1_chr5_+_76114854 U34038	415076	+	AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##BC010695|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK296071|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC065750|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##AK311296|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC050459|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##NM_001099271|POC5|134359|POC5 centriolar protein homolog (Chlamydomonas)##BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor##NM_005242|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC018130|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##U34038|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1	0.031413	
chr8	125049850	125050018	reg1004741.p2	3.818	+	AB196633 NM_001039112	-185708	+	TSC_hg19_v1_chr8_+_124780758 DQ228141 NM_144963 BC144630	-269121	+	TSC_hg19_v1_chr8_+_124780681 AK300603 BC030520	-269244	+	BC101502 BC101506 AK057332 TSC_hg19_v1_chr8_-_125183771	133804	-	TSC_hg19_v1_chr8_-_125384925 BC041379 NM_194291	335018	-	TSC_hg19_v1_chr8_+_125463060 NM_017956 AK225083 AK000779 AK222727 BC011713 BC003057	413138	+	AB196633|FER1L6|654463|fer-1-like 6 (C. elegans)##NM_001039112|FER1L6|654463|fer-1-like 6 (C. elegans)##DQ228141|FAM91A1|157769|family with sequence similarity 91, member A1##NM_144963|FAM91A1|157769|family with sequence similarity 91, member A1##BC144630|FAM91A1|157769|family with sequence similarity 91, member A1##AK300603|FAM91A1|157769|family with sequence similarity 91, member A1##BC030520|FAM91A1|157769|family with sequence similarity 91, member A1##BC101502|C8orf78|157376|chromosome 8 open reading frame 78##BC101506|C8orf78|157376|chromosome 8 open reading frame 78##AK057332|C8orf78|157376|chromosome 8 open reading frame 78##BC041379|TMEM65|157378|transmembrane protein 65##NM_194291|TMEM65|157378|transmembrane protein 65##NM_017956|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK225083|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK000779|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##AK222727|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC011713|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)##BC003057|TRMT12|55039|tRNA methyltransferase 12 homolog (S. cerevisiae)	0.0	
chr8	139520043	139520153	reg1035997.p1	3.818	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	-10992	-	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-3049897	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-3050440	+	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	406146	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	1195184	-	AB067469 TSC_hg19_v1_chr8_-_141467841	1947727	-	AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9	0.889475	CTCF.p2:23:0.889
chr11	128595445	128595558	reg1035963.p1	3.817	+	TSC_hg19_v1_chr11_+_128564132 AB385119 AY029368 CU674822 DQ892582 DQ896858	-31359	+	TSC_hg19_v1_chr11_+_128563997 X67001 S45205 BC010115 BC001670	-31446	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	-31521	+	BC136360 BC136361 BC074752 NM_000220 U12541 AK314267 AK290797	116877	-	U12544 U12545 AK308032 U12543 U03884 AK308033 BC063109 NM_153764 NM_153765 NM_153766 NM_153767 U12542	141698	-	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	165839	+	AY029368|FLI1|2313|Friend leukemia virus integration 1##DQ892582|FLI1|2313|Friend leukemia virus integration 1##DQ896858|FLI1|2313|Friend leukemia virus integration 1##X67001|FLI1|2313|Friend leukemia virus integration 1##S45205|FLI1|2313|Friend leukemia virus integration 1##BC010115|FLI1|2313|Friend leukemia virus integration 1##BC001670|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1##BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5	0.0	
chr13	21050240	21050316	reg1032519.p2	3.817	+	NM_001110219 NM_001110220 NM_001110221	-243745	-	NM_006783	-244907	-	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	-283167	-	BC119660 BC119661 TSC_hg19_v1_chr13_-_21099959 AF160216 AF077049 AF087898 AK024041 BC071810 NM_015974	49695	-	NM_006531 NM_175605 U20362 TSC_hg19_v1_chr13_+_21141275 BC030776	90963	+	TSC_hg19_v1_chr13_+_21141298 AK300769 AK310223 AK308281 AK303853 BC059357	91028	+	NM_001110219|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110220|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110221|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa##AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa##BC119660|CRYL1|51084|crystallin, lambda 1##BC119661|CRYL1|51084|crystallin, lambda 1##AF160216|CRYL1|51084|crystallin, lambda 1##AF077049|CRYL1|51084|crystallin, lambda 1##AF087898|CRYL1|51084|crystallin, lambda 1##AK024041|CRYL1|51084|crystallin, lambda 1##BC071810|CRYL1|51084|crystallin, lambda 1##NM_015974|CRYL1|51084|crystallin, lambda 1##NM_006531|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##NM_175605|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##U20362|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC030776|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK300769|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK310223|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK308281|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK303853|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC059357|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)	0.0	
chr14	78173724	78173832	reg1039904.p1	3.817	+	AB011098 NM_004863 TSC_hg19_v1_chr14_-_78083124	-90652	-	Y08686 TSC_hg19_v1_chr14_-_78082981 BC005123	-90784	-	CU675001 DQ893297 DQ896786 TSC_hg19_v1_chr14_-_78082949	-90843	-	BC015024 X91992 TSC_hg19_v1_chr14_-_78174367 CU693074 DQ890543 DQ893703 BC025787 NM_006020 BX537699	574	-	NM_031210 TSC_hg19_v1_chr14_+_78174435 AF271779	652	+	TSC_hg19_v1_chr14_+_78174445 BC017895 AF253980 AJ272055 AY860853 HQ257938	668	+	AB011098|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##NM_004863|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##Y08686|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##BC005123|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##DQ893297|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##DQ896786|SPTLC2|9517|serine palmitoyltransferase, long chain base subunit 2##BC015024|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##X91992|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##DQ890543|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##DQ893703|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##BC025787|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##NM_006020|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##BX537699|ALKBH1|8846|alkB, alkylation repair homolog 1 (E. coli)##NM_031210|SLIRP|81892|SRA stem-loop interacting RNA binding protein##AF271779|SLIRP|81892|SRA stem-loop interacting RNA binding protein##BC017895|SLIRP|81892|SRA stem-loop interacting RNA binding protein##AF253980|SLIRP|81892|SRA stem-loop interacting RNA binding protein##AJ272055|SLIRP|81892|SRA stem-loop interacting RNA binding protein##AY860853|SLIRP|81892|SRA stem-loop interacting RNA binding protein##HQ257938|SLIRP|81892|SRA stem-loop interacting RNA binding protein	0.0	
chr15	67885903	67885969	reg1041936.p2	3.817	+	AK293459 NM_001206804	-44595	+	TSC_hg19_v1_chr15_+_67835014 NM_002757 NM_145160	-50914	+	TSC_hg19_v1_chr15_-_67814131 BC047537	-71780	-	NM_001031807	232004	+	AF167160 NM_016166 BC118587 BC121797 TSC_hg19_v1_chr15_+_68346652 AK314515 BC104646	460676	+	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	460725	+	AK293459|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_001206804|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_002757|MAP2K5|5607|mitogen-activated protein kinase kinase 5##NM_145160|MAP2K5|5607|mitogen-activated protein kinase kinase 5##BC047537|LOC100506686|100506686|uncharacterized LOC100506686##NM_001031807|SKOR1|390598|SKI family transcriptional corepressor 1##AF167160|PIAS1|8554|protein inhibitor of activated STAT, 1##NM_016166|PIAS1|8554|protein inhibitor of activated STAT, 1##BC118587|PIAS1|8554|protein inhibitor of activated STAT, 1##BC121797|PIAS1|8554|protein inhibitor of activated STAT, 1##AK314515|PIAS1|8554|protein inhibitor of activated STAT, 1##BC104646|PIAS1|8554|protein inhibitor of activated STAT, 1##BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1	0.0	
chr15	74675118	74675275	reg1001372.p2	3.817	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-15193	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-16661	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-64291	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	50833	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	51116	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	78251	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.0	
chr16	21546049	21546166	reg1037180.p2	3.817	+	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	-14355	-	BC036263 NM_130464	-109450	-	BX648477 NM_001014444 NM_001888	-231720	-	TSC_hg19_v1_chr16_+_21610912 NM_001077180 NM_016025 AJ278577 AJ278578 AK074529 BC000195 AK313077 AK075022 AK075237	64783	+	AF151839 TSC_hg19_v1_chr16_+_21611174	65047	+	TSC_hg19_v1_chr16_-_21663930 DQ892013 DQ895202 EU176227 EU176324 AK313860 AK223286 AK290910 AK293703 BC017844	117813	-	BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BX648477|CRYM|1428|crystallin, mu##NM_001014444|CRYM|1428|crystallin, mu##NM_001888|CRYM|1428|crystallin, mu##NM_001077180|METTL9|51108|methyltransferase like 9##NM_016025|METTL9|51108|methyltransferase like 9##AJ278577|METTL9|51108|methyltransferase like 9##AJ278578|METTL9|51108|methyltransferase like 9##AK074529|METTL9|51108|methyltransferase like 9##BC000195|METTL9|51108|methyltransferase like 9##AK313077|METTL9|51108|methyltransferase like 9##AK075022|METTL9|51108|methyltransferase like 9##AK075237|METTL9|51108|methyltransferase like 9##AF151839|METTL9|51108|methyltransferase like 9##DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6##DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6##EU176227|IGSF6|10261|immunoglobulin superfamily, member 6##EU176324|IGSF6|10261|immunoglobulin superfamily, member 6##AK313860|IGSF6|10261|immunoglobulin superfamily, member 6##AK223286|IGSF6|10261|immunoglobulin superfamily, member 6##AK290910|IGSF6|10261|immunoglobulin superfamily, member 6##AK293703|IGSF6|10261|immunoglobulin superfamily, member 6##BC017844|IGSF6|10261|immunoglobulin superfamily, member 6	0.0	
chr16	68018959	68019123	reg1027969.p2	3.817	+	AB590471 BC037243 AJ291679 AY358390 BC057789 AK057401 NM_001129758 NM_022357	-4635	-	AF047338 AF054505 AF054506 DQ892254 DQ895457 TSC_hg19_v1_chr16_-_68002543 AK293956 U55054 AK293906 BC021193 BC035480 NM_001145961 NM_001145962 NM_005072	-16512	-	AK299042 NM_001145964	-18303	-	AJ295149 NM_022355	14318	-	TSC_hg19_v1_chr16_-_68057115 BC024273	38067	-	TSC_hg19_v1_chr16_-_68057129 BC014517	38087	-	BC037243|DPEP3|64180|dipeptidase 3##AJ291679|DPEP3|64180|dipeptidase 3##AY358390|DPEP3|64180|dipeptidase 3##BC057789|DPEP3|64180|dipeptidase 3##AK057401|DPEP3|64180|dipeptidase 3##NM_001129758|DPEP3|64180|dipeptidase 3##NM_022357|DPEP3|64180|dipeptidase 3##AF047338|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AF054505|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AF054506|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##DQ892254|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##DQ895457|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK293956|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##U55054|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK293906|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##BC021193|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##BC035480|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_001145961|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_001145962|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_005072|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AK299042|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##NM_001145964|SLC12A4|6560|solute carrier family 12 (potassium/chloride transporters), member 4##AJ295149|DPEP2|64174|dipeptidase 2##NM_022355|DPEP2|64174|dipeptidase 2##BC024273|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##BC014517|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28	0.0	
chr17	57505060	57505211	reg1036726.p2	3.817	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	-96117	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	-207237	+	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	-217738	+	AF461690 NM_001166301 NM_024612 TSC_hg19_v1_chr17_+_57642970 BC024187 AK299151 AK095681 AF260270 AK226048 AB384723 DQ890909 DQ894060	137852	+	TSC_hg19_v1_chr17_+_57697037 NM_004859	191910	+	TSC_hg19_v1_chr17_+_57697265 BC054489 BX640615	192135	+	NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)##NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_004859|CLTC|1213|clathrin, heavy chain (Hc)##BC054489|CLTC|1213|clathrin, heavy chain (Hc)##BX640615|CLTC|1213|clathrin, heavy chain (Hc)	0.629804	CTCF.p2:26:0.630
chr20	61585506	61585589	reg1024361.p1	3.817	+	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-1422	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-1517	+	TSC_hg19_v1_chr20_+_61569501 NM_017896 BC032120 AK299509 AK000609	-16091	+	BC137288 BC137308 NM_080606	52839	-	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	261976	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	281794	+	AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##NM_017896|C20orf11|54994|chromosome 20 open reading frame 11##BC032120|C20orf11|54994|chromosome 20 open reading frame 11##AK299509|C20orf11|54994|chromosome 20 open reading frame 11##AK000609|C20orf11|54994|chromosome 20 open reading frame 11##BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7	0.0	
chr20	62360130	62360196	reg1038088.p2	3.817	+	TSC_hg19_v1_chr20_+_62339419 NM_001195653 NM_001195654 NM_032527 NM_181485 AK074961 AK122912 AK314726 BC032612 BC019338 AK307368 AK027878	-20767	+	TSC_hg19_v1_chr20_-_62339374 BC010068 NM_001134758 NM_003224	-20817	-	TSC_hg19_v1_chr20_-_62339259 BC092480 BC021023 BC093967 BC143447 BC143448 BC143467 BC143472 BC143477	-20924	-	TSC_hg19_v1_chr20_+_62368015 NM_017806 AK000413	7819	+	TSC_hg19_v1_chr20_+_62368035 BC017016	7877	+	TSC_hg19_v1_chr20_+_62371128 BC052306 AB052777 NM_020062	10997	+	NM_001195653|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##NM_001195654|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##NM_032527|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##NM_181485|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##AK074961|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##AK314726|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##BC032612|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##BC019338|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##AK027878|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##NM_001134758|ARFRP1|10139|ADP-ribosylation factor related protein 1##NM_003224|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC092480|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC021023|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC093967|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143447|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143448|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143467|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143472|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143477|ARFRP1|10139|ADP-ribosylation factor related protein 1##NM_017806|LIME1|54923|Lck interacting transmembrane adaptor 1##AK000413|LIME1|54923|Lck interacting transmembrane adaptor 1##BC017016|LIME1|54923|Lck interacting transmembrane adaptor 1##BC052306|SLC2A4RG|56731|SLC2A4 regulator##AB052777|SLC2A4RG|56731|SLC2A4 regulator##NM_020062|SLC2A4RG|56731|SLC2A4 regulator	0.0	
chr21	46962300	46962389	reg1038272.p2	3.817	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-12	-	AK303168 NM_001205207	-7810	-	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	-86926	+	TSC_hg19_v1_chr21_+_47063638 AK310131	101285	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	307544	+	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	439341	+	U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1##AK310131|PCBP3|54039|poly(rC) binding protein 3##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1	0.151275	
chr3	25482882	25482990	reg1033692.p2	3.817	+	TSC_hg19_v1_chr3_+_25470068 BC060794 AK292032 AB590663 CU687428 AB307688 HQ692864	-12792	+	BC030234 NM_000965 TSC_hg19_v1_chr3_+_25469854 X07282 Y00291	-13069	+	TSC_hg19_v1_chr3_+_25469751 AF157483 NM_016152	-13177	+	TSC_hg19_v1_chr3_-_25679768 M27504	196778	-	AB208879 TSC_hg19_v1_chr3_-_25683850	200902	-	TSC_hg19_v1_chr3_-_25706085 NM_001068 X68060 Z15111	223039	-	BC060794|RARB|5915|retinoic acid receptor, beta##AK292032|RARB|5915|retinoic acid receptor, beta##AB307688|RARB|5915|retinoic acid receptor, beta##HQ692864|RARB|5915|retinoic acid receptor, beta##BC030234|RARB|5915|retinoic acid receptor, beta##NM_000965|RARB|5915|retinoic acid receptor, beta##X07282|RARB|5915|retinoic acid receptor, beta##Y00291|RARB|5915|retinoic acid receptor, beta##AF157483|RARB|5915|retinoic acid receptor, beta##NM_016152|RARB|5915|retinoic acid receptor, beta##M27504|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##AB208879|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##NM_001068|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##X68060|TOP2B|7155|topoisomerase (DNA) II beta 180kDa##Z15111|TOP2B|7155|topoisomerase (DNA) II beta 180kDa	0.993614	CTCF.p2:-3:0.994
chr6	88829581	88829739	reg1042025.p2	3.817	+	BC029488 NM_030960 AF203447	-72130	+	AK001204 NM_018064 TSC_hg19_v1_chr6_-_88411988	-417672	-	TSC_hg19_v1_chr6_-_88411949 AK222701	-417712	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	25376	-	NM_001160226 NM_001160258 NM_001160259 NM_016083	46106	-	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	843531	-	BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AK001204|AKIRIN2|55122|akirin 2##NM_018064|AKIRIN2|55122|akirin 2##AK222701|AKIRIN2|55122|akirin 2##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.0	
chr9	134379613	134379772	reg1038873.p2	3.817	+	AK315218 TSC_hg19_v1_chr9_+_134378402 AK293529 BC022877	-1257	+	TSC_hg19_v1_chr9_+_134378341 BC065268	-1349	+	AK300393 TSC_hg19_v1_chr9_+_134378334	-1358	+	TSC_hg19_v1_chr9_-_134406578 AF254133 CR457281 CU677347 AF237290 AF125106 AK295471 AK307475	26855	-	AK057848 TSC_hg19_v1_chr9_-_134406625 BC091495 BC015547 AK022317 NM_001135954 NM_031432	26958	-	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	205510	-	AK315218|POMT1|10585|protein-O-mannosyltransferase 1##AK293529|POMT1|10585|protein-O-mannosyltransferase 1##BC022877|POMT1|10585|protein-O-mannosyltransferase 1##BC065268|POMT1|10585|protein-O-mannosyltransferase 1##AK300393|POMT1|10585|protein-O-mannosyltransferase 1##AF254133|UCK1|83549|uridine-cytidine kinase 1##CR457281|UCK1|83549|uridine-cytidine kinase 1##AF237290|UCK1|83549|uridine-cytidine kinase 1##AF125106|UCK1|83549|uridine-cytidine kinase 1##AK295471|UCK1|83549|uridine-cytidine kinase 1##AK307475|UCK1|83549|uridine-cytidine kinase 1##AK057848|UCK1|83549|uridine-cytidine kinase 1##BC091495|UCK1|83549|uridine-cytidine kinase 1##BC015547|UCK1|83549|uridine-cytidine kinase 1##AK022317|UCK1|83549|uridine-cytidine kinase 1##NM_001135954|UCK1|83549|uridine-cytidine kinase 1##NM_031432|UCK1|83549|uridine-cytidine kinase 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1	0.120167	
chr1	203595949	203596030	reg1036836.p1	3.816	+	TSC_hg19_v1_chr1_+_203595959 CR936708 CR749393	-30	+	TSC_hg19_v1_chr1_+_203595922 NM_001001396 NM_001684	-80	+	AJ133790 AY077681 NM_014359 AF161702	-132708	+	TSC_hg19_v1_chr1_+_203596243 BC140774	243	+	NM_001136190 NM_017773 AK301076 TSC_hg19_v1_chr1_+_203734310 AK301421 BC089408 AY090784	138342	+	NM_014827 TSC_hg19_v1_chr1_+_203764762 CR627439 AK095858	168785	+	CR936708|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##CR749393|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_001001396|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_001684|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin##BC140774|ATP2B4|493|ATPase, Ca++ transporting, plasma membrane 4##NM_001136190|LAX1|54900|lymphocyte transmembrane adaptor 1##NM_017773|LAX1|54900|lymphocyte transmembrane adaptor 1##AK301076|LAX1|54900|lymphocyte transmembrane adaptor 1##AK301421|LAX1|54900|lymphocyte transmembrane adaptor 1##BC089408|LAX1|54900|lymphocyte transmembrane adaptor 1##AY090784|LAX1|54900|lymphocyte transmembrane adaptor 1##NM_014827|ZC3H11A|9877|zinc finger CCCH-type containing 11A##CR627439|ZC3H11A|9877|zinc finger CCCH-type containing 11A##AK095858|ZC3H11A|9877|zinc finger CCCH-type containing 11A	0.0	
chr1	220011177	220011325	reg1037267.p1	3.816	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-664009	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-664093	+	M19154 TSC_hg19_v1_chr1_+_218519634	-1491646	+	BC036078 TSC_hg19_v1_chr1_-_220101540	90278	-	AB464233 TSC_hg19_v1_chr1_-_220101784	90540	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	90714	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.980352	CTCF.p2:12:0.980
chr1	249099681	249099861	reg1026779.p3	3.816	+	NM_001004734 BC137188 BC137189	-254155	-	NM_001001824	-285587	-	NM_001001827 AB528813	-297212	-	AY358453 TSC_hg19_v1_chr1_-_249120082 AK056382 NM_030645	20337	-	TSC_hg19_v1_chr1_+_249132449 BC029310	32686	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	32774	+	NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##NM_001001824|OR2T27|403239|olfactory receptor, family 2, subfamily T, member 27##NM_001001827|OR2T35|403244|olfactory receptor, family 2, subfamily T, member 35##AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like##AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like##BC029310|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672	0.0	
chr12	50576405	50576512	reg1034345.p1	3.816	+	TSC_hg19_v1_chr12_-_50561153 AK298924	-15233	-	TSC_hg19_v1_chr12_-_50561112 AK026014	-15333	-	AB527479 TSC_hg19_v1_chr12_-_50561095 AK294521 BC014637 AK300937 NM_147190 BC033558	-15367	-	AK023649 AF157325 NM_001243775	18851	-	AF198455 AK297766 TSC_hg19_v1_chr12_-_50616438 NM_001113547	39998	-	BC136763 BC144402 BC144403 TSC_hg19_v1_chr12_-_50677266 AK000372 AK314447 AF198454 AL136911 AK222971 AB209512 BC110815 NM_001113546 NM_016357	100837	-	AK298924|CERS5|91012|ceramide synthase 5##AK026014|CERS5|91012|ceramide synthase 5##AK294521|CERS5|91012|ceramide synthase 5##BC014637|CERS5|91012|ceramide synthase 5##AK300937|CERS5|91012|ceramide synthase 5##NM_147190|CERS5|91012|ceramide synthase 5##BC033558|CERS5|91012|ceramide synthase 5##AK023649|LIMA1|51474|LIM domain and actin binding 1##AF157325|LIMA1|51474|LIM domain and actin binding 1##NM_001243775|LIMA1|51474|LIM domain and actin binding 1##AF198455|LIMA1|51474|LIM domain and actin binding 1##AK297766|LIMA1|51474|LIM domain and actin binding 1##NM_001113547|LIMA1|51474|LIM domain and actin binding 1##BC136763|LIMA1|51474|LIM domain and actin binding 1##BC144402|LIMA1|51474|LIM domain and actin binding 1##BC144403|LIMA1|51474|LIM domain and actin binding 1##AK000372|LIMA1|51474|LIM domain and actin binding 1##AK314447|LIMA1|51474|LIM domain and actin binding 1##AF198454|LIMA1|51474|LIM domain and actin binding 1##AL136911|LIMA1|51474|LIM domain and actin binding 1##AK222971|LIMA1|51474|LIM domain and actin binding 1##AB209512|LIMA1|51474|LIM domain and actin binding 1##BC110815|LIMA1|51474|LIM domain and actin binding 1##NM_001113546|LIMA1|51474|LIM domain and actin binding 1##NM_016357|LIMA1|51474|LIM domain and actin binding 1	0.949251	CTCF.p2:-24:0.949
chr12	7068366	7068503	reg1036713.p1	3.816	+	TSC_hg19_v1_chr12_+_7060554 AK309037 M74903 AF178946	-7832	+	TSC_hg19_v1_chr12_+_7060550 AK290421	-7886	+	AK223629 TSC_hg19_v1_chr12_+_7060538	-7896	+	TSC_hg19_v1_chr12_-_7079814 AB528395 DQ891808 EU176626 BC014766 BC013228 AF178980 AF150962	11287	-	TSC_hg19_v1_chr12_-_7079828 AK298217 AK301316 AF126021 NM_007273 BC110322 NM_001144831	11441	-	NM_006331 BC055314 TSC_hg19_v1_chr12_+_7080072 AK298207	11575	+	M74903|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AF178946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK290421|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK223629|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ891808|PHB2|11331|prohibitin 2##EU176626|PHB2|11331|prohibitin 2##BC014766|PHB2|11331|prohibitin 2##BC013228|PHB2|11331|prohibitin 2##AF178980|PHB2|11331|prohibitin 2##AF150962|PHB2|11331|prohibitin 2##AK298217|PHB2|11331|prohibitin 2##AK301316|PHB2|11331|prohibitin 2##AF126021|PHB2|11331|prohibitin 2##NM_007273|PHB2|11331|prohibitin 2##BC110322|PHB2|11331|prohibitin 2##NM_001144831|PHB2|11331|prohibitin 2##NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	0.0	
chr16	67062754	67062851	reg1029662.p2	3.816	+	NM_001190201 NM_001190202 TSC_hg19_v1_chr16_+_67034441 AK094783 AK300792 AK295483 BC041823 BC064573	-28254	+	AK293061 NM_173815 AK296064	-40273	+	AK025389 NM_001185176	-61425	+	TSC_hg19_v1_chr16_+_67063051 BC018509 NM_001755 NM_022845	245	+	TSC_hg19_v1_chr16_+_67063217 AK290462 AK291834 AB463544 AF294326 BT006862 CU676254 DQ890558 DQ893719 L20298 AK311724	486	+	TSC_hg19_v1_chr16_+_67143864 AF176088 BC004556 NM_025187	81052	+	NM_001190201|CES4A|283848|carboxylesterase 4A##NM_001190202|CES4A|283848|carboxylesterase 4A##AK094783|CES4A|283848|carboxylesterase 4A##AK300792|CES4A|283848|carboxylesterase 4A##AK295483|CES4A|283848|carboxylesterase 4A##BC041823|CES4A|283848|carboxylesterase 4A##BC064573|CES4A|283848|carboxylesterase 4A##AK293061|CES4A|283848|carboxylesterase 4A##NM_173815|CES4A|283848|carboxylesterase 4A##AK296064|CES4A|283848|carboxylesterase 4A##AK025389|CES3|23491|carboxylesterase 3##NM_001185176|CES3|23491|carboxylesterase 3##BC018509|CBFB|865|core-binding factor, beta subunit##NM_001755|CBFB|865|core-binding factor, beta subunit##NM_022845|CBFB|865|core-binding factor, beta subunit##AK290462|CBFB|865|core-binding factor, beta subunit##AK291834|CBFB|865|core-binding factor, beta subunit##AF294326|CBFB|865|core-binding factor, beta subunit##BT006862|CBFB|865|core-binding factor, beta subunit##DQ890558|CBFB|865|core-binding factor, beta subunit##DQ893719|CBFB|865|core-binding factor, beta subunit##L20298|CBFB|865|core-binding factor, beta subunit##AK311724|CBFB|865|core-binding factor, beta subunit##AF176088|C16orf70|80262|chromosome 16 open reading frame 70##BC004556|C16orf70|80262|chromosome 16 open reading frame 70##NM_025187|C16orf70|80262|chromosome 16 open reading frame 70	0.0	
chr18	13726704	13726877	reg1026597.p2	3.816	+	TSC_hg19_v1_chr18_+_13726671 AK296370 BC017816 BX647977 AK303842 BC005290 AK292561 AB007858 AF067791 NM_003799 AB020966 BC036798	-100	+	TSC_hg19_v1_chr18_-_13726582 AK309506 NM_001098801 NM_152352	-204	-	TSC_hg19_v1_chr18_-_13726549 AK055618	-284	-	BC095531 NM_005913	98752	+	AK315319 BC094710 NM_000529 AK289381	188746	-	BC010705 AK096748 BC024227 BC037787 NM_145287	405667	-	AK296370|RNMT|8731|RNA (guanine-7-) methyltransferase##BC017816|RNMT|8731|RNA (guanine-7-) methyltransferase##BX647977|RNMT|8731|RNA (guanine-7-) methyltransferase##AK303842|RNMT|8731|RNA (guanine-7-) methyltransferase##BC005290|RNMT|8731|RNA (guanine-7-) methyltransferase##AK292561|RNMT|8731|RNA (guanine-7-) methyltransferase##AB007858|RNMT|8731|RNA (guanine-7-) methyltransferase##AF067791|RNMT|8731|RNA (guanine-7-) methyltransferase##NM_003799|RNMT|8731|RNA (guanine-7-) methyltransferase##AB020966|RNMT|8731|RNA (guanine-7-) methyltransferase##BC036798|RNMT|8731|RNA (guanine-7-) methyltransferase##AK309506|FAM210A|125228|family with sequence similarity 210, member A##NM_001098801|FAM210A|125228|family with sequence similarity 210, member A##NM_152352|FAM210A|125228|family with sequence similarity 210, member A##AK055618|FAM210A|125228|family with sequence similarity 210, member A##BC095531|MC5R|4161|melanocortin 5 receptor##NM_005913|MC5R|4161|melanocortin 5 receptor##AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC010705|ZNF519|162655|zinc finger protein 519##AK096748|ZNF519|162655|zinc finger protein 519##BC024227|ZNF519|162655|zinc finger protein 519##BC037787|ZNF519|162655|zinc finger protein 519##NM_145287|ZNF519|162655|zinc finger protein 519	0.0	
chr3	196014436	196014591	reg1033258.p1	3.816	+	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	-71119	+	BC034801 BC022078 NM_001039617 AK122907	-76232	-	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-205497	-	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	22	-	BC046355 NM_005017 TSC_hg19_v1_chr3_-_196014591 AK304534 AK309073	105	-	TSC_hg19_v1_chr3_-_196045112 BC015348 BC021177 NM_152773	30600	-	AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##BC046355|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##NM_005017|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK304534|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309073|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##BC015348|TCTEX1D2|255758|Tctex1 domain containing 2##BC021177|TCTEX1D2|255758|Tctex1 domain containing 2##NM_152773|TCTEX1D2|255758|Tctex1 domain containing 2	0.0	
chr6	141095502	141095593	reg1038649.p1	3.816	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-1399763	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-1399786	-	NM_001168389 NM_001168388	-1400124	-	BC095542 GU727635 M73482 NM_002511	1314317	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	1372843	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	1372859	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.0	
chr7	130005586	130005664	reg1029142.p1	3.816	+	NM_001127441 NM_001127442 NM_080385 AK093288 AK315256 AX748034 BC039362 AY155230 BC053681 BC042996 AK131191 AY155229	-20961	+	AK290993 NM_001163446 NM_016352 BC052289 AK310933 AK298553 AK298550 AK299023 AY358699 AF095719 AB590729 CU690898 HQ448429	-72629	+	BC007009 NM_001869 BC014571 BC015140 AK293378 U19977 DQ893811 CU675491 BT007403	-98911	+	NM_001868 AK131054 AK291493 AK293366 BC005279 X67318 CU675077 DQ890565 DQ893728 BT007313	14700	+	BC056162 AK314676 TSC_hg19_v1_chr7_-_130080886 BC018789 AK026098 AJ278890 NM_018718 AK298618 AK311382 AF429308 AF429309	75252	-	TSC_hg19_v1_chr7_+_130126173 AK098397 NM_177524 CR627364 BC090049	120491	+	NM_001127441|CPA5|93979|carboxypeptidase A5##NM_001127442|CPA5|93979|carboxypeptidase A5##NM_080385|CPA5|93979|carboxypeptidase A5##AK093288|CPA5|93979|carboxypeptidase A5##AK315256|CPA5|93979|carboxypeptidase A5##BC039362|CPA5|93979|carboxypeptidase A5##AY155230|CPA5|93979|carboxypeptidase A5##BC053681|CPA5|93979|carboxypeptidase A5##BC042996|CPA5|93979|carboxypeptidase A5##AK131191|CPA5|93979|carboxypeptidase A5##AY155229|CPA5|93979|carboxypeptidase A5##AK290993|CPA4|51200|carboxypeptidase A4##NM_001163446|CPA4|51200|carboxypeptidase A4##NM_016352|CPA4|51200|carboxypeptidase A4##BC052289|CPA4|51200|carboxypeptidase A4##AK310933|CPA4|51200|carboxypeptidase A4##AK298553|CPA4|51200|carboxypeptidase A4##AK298550|CPA4|51200|carboxypeptidase A4##AK299023|CPA4|51200|carboxypeptidase A4##AY358699|CPA4|51200|carboxypeptidase A4##AF095719|CPA4|51200|carboxypeptidase A4##HQ448429|CPA4|51200|carboxypeptidase A4##BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)##AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)##U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)##DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)##BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001868|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK131054|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK291493|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK293366|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC005279|CPA1|1357|carboxypeptidase A1 (pancreatic)##X67318|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ890565|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ893728|CPA1|1357|carboxypeptidase A1 (pancreatic)##BT007313|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC056162|CEP41|95681|centrosomal protein 41kDa##AK314676|CEP41|95681|centrosomal protein 41kDa##BC018789|CEP41|95681|centrosomal protein 41kDa##AK026098|CEP41|95681|centrosomal protein 41kDa##AJ278890|CEP41|95681|centrosomal protein 41kDa##NM_018718|CEP41|95681|centrosomal protein 41kDa##AK298618|CEP41|95681|centrosomal protein 41kDa##AK311382|CEP41|95681|centrosomal protein 41kDa##AF429308|CEP41|95681|centrosomal protein 41kDa##AF429309|CEP41|95681|centrosomal protein 41kDa##AK098397|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_177524|MEST|4232|mesoderm specific transcript homolog (mouse)##CR627364|MEST|4232|mesoderm specific transcript homolog (mouse)##BC090049|MEST|4232|mesoderm specific transcript homolog (mouse)	0.0	
chr1	1597270	1597389	reg1031369.p2	3.815	+	BC054019 TSC_hg19_v1_chr1_-_1590434 BC104661 BC009375	-6876	-	AK297700 AB010962 AJ005256 NM_006983 BC025719 AB010961 AF056200	-29759	+	TSC_hg19_v1_chr1_+_1551275 NM_001170689 AK128167 BC035109 AK098785	-46029	+	TSC_hg19_v1_chr1_-_1623947 CR936618 BC062371	26636	-	BC092507 TSC_hg19_v1_chr1_-_1624149 AK125619	26829	-	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	26888	-	BC054019|CDK11A|728642|cyclin-dependent kinase 11A##BC104661|CDK11A|728642|cyclin-dependent kinase 11A##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AK297700|MMP23B|8510|matrix metallopeptidase 23B##AB010962|MMP23B|8510|matrix metallopeptidase 23B##AJ005256|MMP23B|8510|matrix metallopeptidase 23B##NM_006983|MMP23B|8510|matrix metallopeptidase 23B##BC025719|MMP23B|8510|matrix metallopeptidase 23B##AB010961|MMP23B|8510|matrix metallopeptidase 23B##AF056200|MMP23B|8510|matrix metallopeptidase 23B##NM_001170689|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK128167|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC035109|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK098785|MIB2|142678|mindbomb homolog 2 (Drosophila)##CR936618|SLC35E2B|728661|solute carrier family 35, member E2B##BC062371|SLC35E2|9906|solute carrier family 35, member E2##BC092507|SLC35E2B|728661|solute carrier family 35, member E2B##AK125619|SLC35E2B|728661|solute carrier family 35, member E2B##AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B	0.823656	CTCF.p2:-14:0.824
chr11	65819437	65819570	reg1038668.p1	3.815	+	AB053232 NM_033036	-2853	-	AF407333 AB527999 CU689580 BC036522 BC032950 NM_053054	-25585	-	NM_001323 BC031334 U62800 U81233 CR456872	-40015	+	TSC_hg19_v1_chr11_+_65819834 NM_006842 AK290850 BC010372 BC053577 BX537771 AB463285 BC000401 U41371	337	+	TSC_hg19_v1_chr11_+_65837841 AK096644 NM_018026 AK098336 AY320283 BC010096 BC052577	18407	+	TSC_hg19_v1_chr11_+_65984213 AB033001	164719	+	AB053232|GAL3ST3|89792|galactose-3-O-sulfotransferase 3##NM_033036|GAL3ST3|89792|galactose-3-O-sulfotransferase 3##AF407333|CATSPER1|117144|cation channel, sperm associated 1##BC036522|CATSPER1|117144|cation channel, sperm associated 1##BC032950|CATSPER1|117144|cation channel, sperm associated 1##NM_053054|CATSPER1|117144|cation channel, sperm associated 1##NM_001323|CST6|1474|cystatin E/M##BC031334|CST6|1474|cystatin E/M##U62800|CST6|1474|cystatin E/M##U81233|CST6|1474|cystatin E/M##CR456872|CST6|1474|cystatin E/M##NM_006842|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##AK290850|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BC053577|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BX537771|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##BC000401|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##U41371|SF3B2|10992|splicing factor 3b, subunit 2, 145kDa##AK096644|PACS1|55690|phosphofurin acidic cluster sorting protein 1##NM_018026|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AK098336|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AY320283|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC010096|PACS1|55690|phosphofurin acidic cluster sorting protein 1##BC052577|PACS1|55690|phosphofurin acidic cluster sorting protein 1##AB033001|PACS1|55690|phosphofurin acidic cluster sorting protein 1	0.0	
chr12	46122737	46122863	reg1034004.p2	3.815	+	TSC_hg19_v1_chr12_-_46121531 BC047417	-1270	-	TSC_hg19_v1_chr12_-_46121280 BC037237 BC008245	-1527	-	AL832340 NM_001142678	-436335	+	TSC_hg19_v1_chr12_+_46123488 AK127872	683	+	TSC_hg19_v1_chr12_+_46123498 AB527360 AY727870 DQ096628 NM_152641 CR749833	797	+	AB463286 TSC_hg19_v1_chr12_-_46357972	235160	-	BC047417|LOC400027|400027|uncharacterized LOC400027##BC037237|LOC400027|400027|uncharacterized LOC400027##BC008245|LOC400027|400027|uncharacterized LOC400027##AL832340|ANO6|196527|anoctamin 6##NM_001142678|ANO6|196527|anoctamin 6##AK127872|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##AY727870|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##DQ096628|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##NM_152641|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)##CR749833|ARID2|196528|AT rich interactive domain 2 (ARID, RFX-like)	0.0	
chr1	47901937	47902003	reg1011146.p1	3.815	+	AF042832 NM_004474	-282	+	AF275722 NM_012186	-20227	+	TSC_hg19_v1_chr1_+_47799646 AF259961	-102329	+	NM_001194986	560591	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	786422	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	1035708	-	AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##NM_001194986|LOC388630|388630|UPF0632 protein A##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6	0.0	
chr15	91429127	91429220	reg1000686.p3	3.815	+	DQ891350 DQ894530 AB590559 AY513654 AY513655 AY513656 AY513657 NM_001143783 NM_001143784	-900	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	-1472	+	NM_002569 X17094	-17289	+	TSC_hg19_v1_chr15_+_91445984 D55649 L28821	16803	+	AK289863 TSC_hg19_v1_chr15_+_91446685	17452	+	BC136448 BC144111 NM_006122	18246	+	DQ891350|FES|2242|feline sarcoma oncogene##DQ894530|FES|2242|feline sarcoma oncogene##AY513654|FES|2242|feline sarcoma oncogene##AY513655|FES|2242|feline sarcoma oncogene##AY513656|FES|2242|feline sarcoma oncogene##AY513657|FES|2242|feline sarcoma oncogene##NM_001143783|FES|2242|feline sarcoma oncogene##NM_001143784|FES|2242|feline sarcoma oncogene##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##D55649|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##L28821|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##AK289863|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2	0.0	
chr19	12405883	12405991	reg1029145.p2	3.815	+	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	-285	-	TSC_hg19_v1_chr19_+_12305871 AK093188 AX721123	-100031	+	AK023304 TSC_hg19_v1_chr19_+_12305836	-100104	+	AK313755 BC022523 AK092116 AX747362 NM_145276	38547	-	AK024418 AK295923 NM_030824	70523	-	TSC_hg19_v1_chr19_-_12512035 BC057831 NM_001080821	106117	-	BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44##AK023304|LOC100289333|100289333|uncharacterized LOC100289333##AK313755|ZNF563|147837|zinc finger protein 563##BC022523|ZNF563|147837|zinc finger protein 563##AK092116|ZNF563|147837|zinc finger protein 563##NM_145276|ZNF563|147837|zinc finger protein 563##AK024418|ZNF442|79973|zinc finger protein 442##AK295923|ZNF442|79973|zinc finger protein 442##NM_030824|ZNF442|79973|zinc finger protein 442##NM_001080821|ZNF799|90576|zinc finger protein 799	0.0	
chr21	34100780	34100901	reg1030658.p2	3.815	+	TSC_hg19_v1_chr21_+_34100412 AK056384 BC038361	-422	+	TSC_hg19_v1_chr21_-_34100325 NM_003895 NM_203446	-507	-	TSC_hg19_v1_chr21_-_34100236 AK307762 BC019630 AB020717 NM_001160302 NM_001160306 AF009039 AF009040	-582	-	AY033903 AY033904 AY033905 AY033906 TSC_hg19_v1_chr21_-_34144044 AJ279080 AJ279081 AK309404 BC030539 BC084542 BC062992 NM_013329 NM_016631	43234	-	AK096601 BC034794 TSC_hg19_v1_chr21_+_34144471 BC117397 BC117399	43623	+	BC069689 BC069709 BC069766 BC069779 AF231922 AK290983 DQ656042 NM_001162495 NM_001162496 NM_019596	85157	-	AK056384|GCFC1-AS1|100506215|GCFC1 antisense RNA 1 (non-protein coding)##BC038361|GCFC1-AS1|100506215|GCFC1 antisense RNA 1 (non-protein coding)##NM_003895|SYNJ1|8867|synaptojanin 1##NM_203446|SYNJ1|8867|synaptojanin 1##AK307762|SYNJ1|8867|synaptojanin 1##BC019630|SYNJ1|8867|synaptojanin 1##AB020717|SYNJ1|8867|synaptojanin 1##NM_001160302|SYNJ1|8867|synaptojanin 1##NM_001160306|SYNJ1|8867|synaptojanin 1##AF009039|SYNJ1|8867|synaptojanin 1##AF009040|SYNJ1|8867|synaptojanin 1##AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AK096601|C21orf49|54067|chromosome 21 open reading frame 49##BC034794|C21orf49|54067|chromosome 21 open reading frame 49##BC117397|C21orf49|54067|chromosome 21 open reading frame 49##BC117399|C21orf49|54067|chromosome 21 open reading frame 49##BC069689|C21orf62|56245|chromosome 21 open reading frame 62##BC069709|C21orf62|56245|chromosome 21 open reading frame 62##BC069766|C21orf62|56245|chromosome 21 open reading frame 62##BC069779|C21orf62|56245|chromosome 21 open reading frame 62##AF231922|C21orf62|56245|chromosome 21 open reading frame 62##AK290983|C21orf62|56245|chromosome 21 open reading frame 62##DQ656042|C21orf62|56245|chromosome 21 open reading frame 62##NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62##NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62##NM_019596|C21orf62|56245|chromosome 21 open reading frame 62	0.025968	
chr6_dbb_hap3	3661517	3661583	reg1038933.p1	3.815	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.101968	
chrX	30531543	30531629	reg1037397.p1	3.815	+	HQ692832 AB464646 BC011564 NM_000475	-204100	-	NM_177404 BC013772	-266290	+	AK314977 NM_002363 NM_177415 X82539	-269739	+	TSC_hg19_v1_chrX_-_30595884 AK021639 BC020611 NM_025159	64371	-	TSC_hg19_v1_chrX_+_30671493 BC042421 BC071595 NM_000167 NM_001128127 NM_001205019 NM_203391	139908	+	TSC_hg19_v1_chrX_+_30671539 AK313215	139956	+	HQ692832|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##BC011564|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_000475|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_177404|MAGEB1|4112|melanoma antigen family B, 1##BC013772|MAGEB1|4112|melanoma antigen family B, 1##AK314977|MAGEB1|4112|melanoma antigen family B, 1##NM_002363|MAGEB1|4112|melanoma antigen family B, 1##NM_177415|MAGEB1|4112|melanoma antigen family B, 1##X82539|MAGEB1|4112|melanoma antigen family B, 1##AK021639|CXorf21|80231|chromosome X open reading frame 21##BC020611|CXorf21|80231|chromosome X open reading frame 21##NM_025159|CXorf21|80231|chromosome X open reading frame 21##BC042421|GK|2710|glycerol kinase##BC071595|GK|2710|glycerol kinase##NM_000167|GK|2710|glycerol kinase##NM_001128127|GK|2710|glycerol kinase##NM_001205019|GK|2710|glycerol kinase##NM_203391|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase	0.998771	CTCF.p2:0:0.999
chr10	125151909	125151976	reg1030223.p2	3.814	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-237586	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-237996	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-238044	+	AJ505757 NM_153442 BC112011 BC113462	273935	+	BC137492 BC146862 AY358565 NM_198148	499554	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	699957	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.0	
chr1	36600647	36600716	reg1003778.p2	3.814	+	AK074129 BC096295 BC096296 BC096297 BC099645 NM_005202	-34832	-	NM_017825 AF212236 TSC_hg19_v1_chr1_+_36554492 AJ427295 AK000453 AK295283 BC014169 AK316349 AK223037 CR457237	-46203	+	TSC_hg19_v1_chr1_+_36549714 BC035620 AK313610	-50958	+	AJ224335 TSC_hg19_v1_chr1_-_36615058 AY007139	14355	-	BC007662 NM_014408 AF041432 TSC_hg19_v1_chr1_-_36615078 AK315610	14409	-	TSC_hg19_v1_chr1_+_36621723 AB033013	20921	+	AK074129|COL8A2|1296|collagen, type VIII, alpha 2##BC096295|COL8A2|1296|collagen, type VIII, alpha 2##BC096296|COL8A2|1296|collagen, type VIII, alpha 2##BC096297|COL8A2|1296|collagen, type VIII, alpha 2##BC099645|COL8A2|1296|collagen, type VIII, alpha 2##NM_005202|COL8A2|1296|collagen, type VIII, alpha 2##NM_017825|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AF212236|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AJ427295|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK000453|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK295283|ADPRHL2|54936|ADP-ribosylhydrolase like 2##BC014169|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK316349|ADPRHL2|54936|ADP-ribosylhydrolase like 2##AK223037|ADPRHL2|54936|ADP-ribosylhydrolase like 2##CR457237|ADPRHL2|54936|ADP-ribosylhydrolase like 2##BC035620|TEKT2|27285|tektin 2 (testicular)##AK313610|TEKT2|27285|tektin 2 (testicular)##AJ224335|TRAPPC3|27095|trafficking protein particle complex 3##AY007139|TRAPPC3|27095|trafficking protein particle complex 3##BC007662|TRAPPC3|27095|trafficking protein particle complex 3##NM_014408|TRAPPC3|27095|trafficking protein particle complex 3##AF041432|TRAPPC3|27095|trafficking protein particle complex 3##AK315610|TRAPPC3|27095|trafficking protein particle complex 3##AB033013|MAP7D1|55700|MAP7 domain containing 1	0.0	
chr15	89011563	89011660	reg1035487.p2	3.814	+	TSC_hg19_v1_chr15_+_89010935 BC032378 BC012489 AK027059 AK026165 AK222933 AK315407 AK223152 BC000200 CU680342 CU689362 DQ891586 DQ894780 BC009451	-685	+	AB049944 NM_022839 NM_176805	-928	+	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	-983	-	BC109060 BC109061 BC073867 AK054603 BC064591 AB073887 NM_001144074 NM_017996	78240	-	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	152959	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	170575	+	BC032378|MRPS11|64963|mitochondrial ribosomal protein S11##BC012489|MRPS11|64963|mitochondrial ribosomal protein S11##AK027059|MRPS11|64963|mitochondrial ribosomal protein S11##AK026165|MRPS11|64963|mitochondrial ribosomal protein S11##AK222933|MRPS11|64963|mitochondrial ribosomal protein S11##AK315407|MRPS11|64963|mitochondrial ribosomal protein S11##AK223152|MRPS11|64963|mitochondrial ribosomal protein S11##BC000200|MRPS11|64963|mitochondrial ribosomal protein S11##DQ891586|MRPS11|64963|mitochondrial ribosomal protein S11##DQ894780|MRPS11|64963|mitochondrial ribosomal protein S11##BC009451|MRPS11|64963|mitochondrial ribosomal protein S11##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa	0.0	
chr20	49178152	49178247	reg1035317.p1	3.814	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	-51194	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-51267	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-51280	+	AK056792 NM_080829	75226	-	TSC_hg19_v1_chr20_-_49308074 AK124347	129878	-	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	169870	+	BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	0.0	
chr2	171772725	171772847	reg1036665.p1	3.814	+	TSC_hg19_v1_chr2_+_171673396 AK292582 BC026349 BC002815 S61898 L16888 Z22750	-99374	+	M81883 NM_000817 NM_013445 BC037780 TSC_hg19_v1_chr2_+_171673241	-99627	+	TSC_hg19_v1_chr2_+_171572707 BC069026	-200076	+	NM_001201428 AL117430 AK125761 NM_015530	12205	+	TSC_hg19_v1_chr2_+_171785776 AK315508 AK023201 AK225810 AK293640 AK023082	12915	+	TSC_hg19_v1_chr2_+_171785781 AK298020 BC007770 BC001408 AK296698 AK027349 AB528359 DQ892715 DQ895965 CU675801	13028	+	AK292582|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC026349|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC002815|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##S61898|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##L16888|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##Z22750|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##M81883|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_000817|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##NM_013445|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC037780|GAD1|2571|glutamate decarboxylase 1 (brain, 67kDa)##BC069026|SP5|389058|Sp5 transcription factor##NM_001201428|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AL117430|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK125761|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##NM_015530|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK315508|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023201|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK225810|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK293640|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK023082|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK298020|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC007770|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##BC001408|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK296698|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##AK027349|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ892715|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa##DQ895965|GORASP2|26003|golgi reassembly stacking protein 2, 55kDa	0.010441	
chr2	23609317	23609432	reg1035196.p1	3.814	+	NM_052920	-1077	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2342445	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-2342475	-	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	540572	-	TSC_hg19_v1_chr2_+_24150144 BC037901	540783	+	TSC_hg19_v1_chr2_+_24163332 BC092484 AL832079 NM_181713 BC111997 BC093681 BC143298	553997	+	NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A##BC092484|UBXN2A|165324|UBX domain protein 2A##AL832079|UBXN2A|165324|UBX domain protein 2A##NM_181713|UBXN2A|165324|UBX domain protein 2A##BC111997|UBXN2A|165324|UBX domain protein 2A##BC093681|UBXN2A|165324|UBX domain protein 2A##BC143298|UBXN2A|165324|UBX domain protein 2A	0.428482	CTCF.p2:24:0.385
chr2	43635497	43635678	reg1037967.p1	3.814	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-181845	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-181857	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-182242	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	187561	-	TSC_hg19_v1_chr2_+_43864411 BC063310	228826	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	228852	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.0	
chr2	47499780	47499855	reg1014566.p2	3.814	+	TSC_hg19_v1_chr2_-_47403685 NM_001743	-96108	-	TSC_hg19_v1_chr2_-_47403656 BC008437	-96163	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	-96167	-	NM_002354 TSC_hg19_v1_chr2_+_47596376	96525	+	TSC_hg19_v1_chr2_+_47596449 AK026585 BC014785 M26481 M32325 X14758 M33011 M32306 DQ891338 DQ894520 CR542259 CR542283	96728	+	TSC_hg19_v1_chr2_+_47630218 AK304496	130387	+	NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC008437|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##NM_002354|EPCAM|4072|epithelial cell adhesion molecule##AK026585|EPCAM|4072|epithelial cell adhesion molecule##BC014785|EPCAM|4072|epithelial cell adhesion molecule##M26481|EPCAM|4072|epithelial cell adhesion molecule##M32325|EPCAM|4072|epithelial cell adhesion molecule##X14758|EPCAM|4072|epithelial cell adhesion molecule##M33011|EPCAM|4072|epithelial cell adhesion molecule##M32306|EPCAM|4072|epithelial cell adhesion molecule##DQ891338|EPCAM|4072|epithelial cell adhesion molecule##DQ894520|EPCAM|4072|epithelial cell adhesion molecule##CR542259|EPCAM|4072|epithelial cell adhesion molecule##CR542283|EPCAM|4072|epithelial cell adhesion molecule##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.0	
chr3	134557585	134557722	reg1033925.p2	3.814	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-43352	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-43502	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-187808	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	1126878	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	1126967	+	NM_181897 AK316258 L12146	1183965	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.999746	CTCF.p2:-15:0.984
chr3	46107057	46107209	reg1024305.p2	3.814	+	AB189434 AB189435 NM_001024644 NM_005283	-38155	-	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	-69812	-	NM_006564 Y13248	-122161	+	BC064991 TSC_hg19_v1_chr3_-_46249804 L10918 BC051306 NM_001295	142676	-	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	176783	+	AK292685 NM_001123041 NM_001123396	288096	+	AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##BC064991|CCR1|1230|chemokine (C-C motif) receptor 1##L10918|CCR1|1230|chemokine (C-C motif) receptor 1##BC051306|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001295|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2	0.0	
chr4	10956576	10956681	reg1032847.p1	3.814	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-270227	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-497618	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-838092	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	473904	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2529323	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2529347	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr4	74177300	74177468	reg1034794.p2	3.814	+	TSC_hg19_v1_chr4_-_74124513 BC043394 BC004173 AF308285 NM_032217 NM_198889 AK307581	-52899	-	TSC_hg19_v1_chr4_-_74124365 AB527094	-53025	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	-88605	-	NM_000477 TSC_hg19_v1_chr4_+_74270005 AK292755 AK298461 AK308044 AK314794 BC034023 BC035969 BC036003 BC041789 AK298437 BC034026 BC039235 CR749331 V00494 AF542069 AY960291 AY358313 DQ986150 AY544124 AY550967 DQ891414 DQ894588 AF190168 AY728024 CU690238	92623	+	HQ537426 TSC_hg19_v1_chr4_+_74270841	93453	+	TSC_hg19_v1_chr4_+_74281884 BC014308	104561	+	BC043394|ANKRD17|26057|ankyrin repeat domain 17##BC004173|ANKRD17|26057|ankyrin repeat domain 17##AF308285|ANKRD17|26057|ankyrin repeat domain 17##NM_032217|ANKRD17|26057|ankyrin repeat domain 17##NM_198889|ANKRD17|26057|ankyrin repeat domain 17##AK307581|ANKRD17|26057|ankyrin repeat domain 17##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17##NM_000477|ALB|213|albumin##AK292755|ALB|213|albumin##AK298461|ALB|213|albumin##AK308044|ALB|213|albumin##AK314794|ALB|213|albumin##BC034023|ALB|213|albumin##BC035969|ALB|213|albumin##BC036003|ALB|213|albumin##BC041789|ALB|213|albumin##AK298437|ALB|213|albumin##BC034026|ALB|213|albumin##BC039235|ALB|213|albumin##CR749331|ALB|213|albumin##V00494|ALB|213|albumin##AF542069|ALB|213|albumin##AY960291|ALB|213|albumin##AY358313|ALB|213|albumin##DQ986150|ALB|213|albumin##AY544124|ALB|213|albumin##AY550967|ALB|213|albumin##DQ891414|ALB|213|albumin##DQ894588|ALB|213|albumin##AF190168|ALB|213|albumin##AY728024|ALB|213|albumin##HQ537426|ALB|213|albumin##BC014308|ALB|213|albumin	0.99187	CTCF.p2:2:0.992
chr5	135709722	135709889	reg1040683.p1	3.814	+	NM_001167576 NM_001167577 NM_020389	-8642	-	TSC_hg19_v1_chr5_+_135468583 AK311231 BX648328 CR749366 CR749473	-241221	+	TSC_hg19_v1_chr5_+_135468533 AK313397 AF009745 AF071106 AF071107 AF071108 NM_001001419 NM_001001420 NM_005903	-241276	+	TSC_hg19_v1_chr5_-_136834252 AB463280 DQ890914 DQ894065	1124436	-	TSC_hg19_v1_chr5_-_136834420 AK094489	1124622	-	AF231124 TSC_hg19_v1_chr5_-_136835016 AB209701 BC030691 NM_004598	1125175	-	NM_001167576|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_001167577|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##NM_020389|TRPC7|57113|transient receptor potential cation channel, subfamily C, member 7##AK311231|SMAD5|4090|SMAD family member 5##BX648328|SMAD5|4090|SMAD family member 5##CR749366|SMAD5|4090|SMAD family member 5##CR749473|SMAD5|4090|SMAD family member 5##AK313397|SMAD5|4090|SMAD family member 5##AF009745|SMAD5|4090|SMAD family member 5##AF071106|SMAD5|4090|SMAD family member 5##AF071107|SMAD5|4090|SMAD family member 5##AF071108|SMAD5|4090|SMAD family member 5##NM_001001419|SMAD5|4090|SMAD family member 5##NM_001001420|SMAD5|4090|SMAD family member 5##NM_005903|SMAD5|4090|SMAD family member 5##DQ890914|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##DQ894065|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AK094489|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AF231124|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##AB209701|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##BC030691|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1##NM_004598|SPOCK1|6695|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1	0.856488	CTCF.p2:-1:0.856
chr6	33393810	33393910	reg1033316.p1	3.814	+	AK094225 NM_006772 AB067525 AK307888 AB385518	-5917	+	NM_001014433 NM_001014837 NM_001014838 NM_001014840 NM_015921 TSC_hg19_v1_chr6_-_33386080	-7780	-	TSC_hg19_v1_chr6_-_33385881 AK311556	-7997	-	TSC_hg19_v1_chr6_+_33422352 AK313571 AK122644 NM_152735 BC014978	28512	+	U23765 U16811 TSC_hg19_v1_chr6_-_33547998 X84213 BC004431 BC032789 BC110337 AK091807 AK292093	154055	-	TSC_hg19_v1_chr6_-_33548037 AK303422 AK293547 NM_001188	154183	-	AK094225|SYNGAP1|8831|synaptic Ras GTPase activating protein 1##NM_006772|SYNGAP1|8831|synaptic Ras GTPase activating protein 1##AK307888|SYNGAP1|8831|synaptic Ras GTPase activating protein 1##NM_001014433|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)##NM_001014837|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)##NM_001014838|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)##NM_001014840|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)##NM_015921|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)##AK313571|ZBTB9|221504|zinc finger and BTB domain containing 9##AK122644|ZBTB9|221504|zinc finger and BTB domain containing 9##NM_152735|ZBTB9|221504|zinc finger and BTB domain containing 9##BC014978|ZBTB9|221504|zinc finger and BTB domain containing 9##U23765|BAK1|578|BCL2-antagonist/killer 1##U16811|BAK1|578|BCL2-antagonist/killer 1##X84213|BAK1|578|BCL2-antagonist/killer 1##BC004431|BAK1|578|BCL2-antagonist/killer 1##BC032789|BAK1|578|BCL2-antagonist/killer 1##BC110337|BAK1|578|BCL2-antagonist/killer 1##AK091807|BAK1|578|BCL2-antagonist/killer 1##AK292093|BAK1|578|BCL2-antagonist/killer 1##AK303422|BAK1|578|BCL2-antagonist/killer 1##AK293547|BAK1|578|BCL2-antagonist/killer 1##NM_001188|BAK1|578|BCL2-antagonist/killer 1	0.84037	CTCF.p2:-17:0.840
chr7	143598778	143598958	reg1039009.p1	3.814	+	AK299911 TSC_hg19_v1_chr7_-_143582416 NM_001206941	-16454	-	BC110410 BC043153 NM_178561	-144062	-	NM_001130026 AK296318	-185918	+	TSC_hg19_v1_chr7_-_143599249 AB018281 NM_014719 BC000609 AK291605 AK001640 NM_001206938	397	-	BC136812 BC136813 NM_001004685	33423	+	BC104975 NM_012369	58151	+	AK299911|FAM115A|9747|family with sequence similarity 115, member A##NM_001206941|FAM115A|9747|family with sequence similarity 115, member A##BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_178561|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_001130026|FAM115C|285966|family with sequence similarity 115, member C##AK296318|FAM115C|285966|family with sequence similarity 115, member C##AB018281|FAM115A|9747|family with sequence similarity 115, member A##NM_014719|FAM115A|9747|family with sequence similarity 115, member A##BC000609|FAM115A|9747|family with sequence similarity 115, member A##AK291605|FAM115A|9747|family with sequence similarity 115, member A##AK001640|FAM115A|9747|family with sequence similarity 115, member A##NM_001206938|FAM115A|9747|family with sequence similarity 115, member A##BC136812|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##BC136813|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##NM_001004685|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##BC104975|OR2F1|26211|olfactory receptor, family 2, subfamily F, member 1##NM_012369|OR2F1|26211|olfactory receptor, family 2, subfamily F, member 1	1.178116	CTCF.p2:-15:0.971	CTCF.p2:93:0.207
chr9	132769847	132769947	reg1025194.p2	3.814	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-172132	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-172175	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-172213	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	35457	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	35591	-	BC039728 NM_001136557 NM_001136558 NM_020960	46087	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chrX	6656964	6657106	reg1030062.p1	3.814	+	AF167078 AF167079 NM_016379	-203877	-	AK055471 BC034018 NM_181332	-510355	-	AB033086 AF376803 AX773938 NM_020742	-511148	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	408916	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	409157	-	NM_000351 M16505 J04964 AK314034	480466	+	AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S	0.0	
chr10	121447882	121448062	reg1003572.p2	3.813	+	TSC_hg19_v1_chr10_+_121411086 BC001445 AK291333 BC014656 DQ893416 DQ896772 CU675397 AB385565	-36836	+	TSC_hg19_v1_chr10_+_121411079 BC107786	-36897	+	TSC_hg19_v1_chr10_+_121411053 AL137582	-36919	+	TSC_hg19_v1_chr10_+_121485568 NM_001243195 NM_014937 AK307758	37566	+	TSC_hg19_v1_chr10_+_121485596 BC067820 AB023183	37642	+	TSC_hg19_v1_chr10_+_121485653 BC111493 BC052367 BC082755 AB385409	37733	+	AK291333|BAG3|9531|BCL2-associated athanogene 3##BC014656|BAG3|9531|BCL2-associated athanogene 3##DQ893416|BAG3|9531|BCL2-associated athanogene 3##DQ896772|BAG3|9531|BCL2-associated athanogene 3##BC107786|BAG3|9531|BCL2-associated athanogene 3##AL137582|BAG3|9531|BCL2-associated athanogene 3##NM_001243195|INPP5F|22876|inositol polyphosphate-5-phosphatase F##NM_014937|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK307758|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC067820|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AB023183|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC111493|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC052367|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC082755|INPP5F|22876|inositol polyphosphate-5-phosphatase F	0.231608	CTCF.p2:65:0.232
chr11	26492684	26492789	reg1036005.p1	3.813	+	NM_031418 AK302659	-139006	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-1974087	+	NM_001195637	-3610765	-	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	101004	-	BC049207 NM_178498	250823	-	NM_203371 TSC_hg19_v1_chr11_+_27015658	522906	+	NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)	0.0	
chr12	89027242	89027345	reg1035870.p1	3.813	+	BC074725 AK293002 AF119835 AF400437 BC126166 BC143899 BC069797 BC069733 BC069783 TSC_hg19_v1_chr12_-_88974249 AF400436 M59964 AK290319 NM_000899 NM_003994	-53121	-	TSC_hg19_v1_chr12_+_88536083 AK290436 AK302755 AK310375 AK310393 NM_181783 CR749309 BX538169 CR749244 CR933632 AJ697717 BC117177 BC117175	-491145	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	-491424	-	TSC_hg19_v1_chr12_+_89744716 AK124265	717459	+	TSC_hg19_v1_chr12_-_89745782 AB451265 AB451393 BT006895 CU678402 AB463588 DQ892490 DQ895701	718492	-	TSC_hg19_v1_chr12_-_89746181 BC003143 BC003562 AB013382 AB013602 X93920 AK222882	718798	-	BC074725|KITLG|4254|KIT ligand##AK293002|KITLG|4254|KIT ligand##AF119835|KITLG|4254|KIT ligand##AF400437|KITLG|4254|KIT ligand##BC126166|KITLG|4254|KIT ligand##BC143899|KITLG|4254|KIT ligand##BC069797|KITLG|4254|KIT ligand##BC069733|KITLG|4254|KIT ligand##BC069783|KITLG|4254|KIT ligand##AF400436|KITLG|4254|KIT ligand##M59964|KITLG|4254|KIT ligand##AK290319|KITLG|4254|KIT ligand##NM_000899|KITLG|4254|KIT ligand##NM_003994|KITLG|4254|KIT ligand##AK290436|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK302755|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310375|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310393|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##NM_181783|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749309|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BX538169|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749244|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR933632|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AJ697717|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117177|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117175|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa##AK124265|LOC100131490|100131490|uncharacterized LOC100131490##AB451265|DUSP6|1848|dual specificity phosphatase 6##AB451393|DUSP6|1848|dual specificity phosphatase 6##BT006895|DUSP6|1848|dual specificity phosphatase 6##DQ892490|DUSP6|1848|dual specificity phosphatase 6##DQ895701|DUSP6|1848|dual specificity phosphatase 6##BC003143|DUSP6|1848|dual specificity phosphatase 6##BC003562|DUSP6|1848|dual specificity phosphatase 6##AB013382|DUSP6|1848|dual specificity phosphatase 6##AB013602|DUSP6|1848|dual specificity phosphatase 6##X93920|DUSP6|1848|dual specificity phosphatase 6##AK222882|DUSP6|1848|dual specificity phosphatase 6	0.378166	CTCF.p2:-7:0.378
chr1	33458358	33458530	reg1035121.p2	3.813	+	NM_001127361 NM_153341 TSC_hg19_v1_chr1_-_33430415 AK131439	-28048	-	AY359883 TSC_hg19_v1_chr1_-_33366959 AY027543 BC020497 BC001418 BC013953 NM_033504 BC023260	-91510	-	TSC_hg19_v1_chr1_+_33352097 DQ426877 AK313907 BC001777 NM_002143	-106360	+	AB451267 AB451394 AY080900 U54645 BC009405 AK307731 TSC_hg19_v1_chr1_-_33502450 AK295105 AK296863 BC026705 AK291676 AK297036	43995	-	TSC_hg19_v1_chr1_-_33502463 BC070127 BC090040 U84371 U39945 AY080899	44013	-	TSC_hg19_v1_chr1_-_33502465 AB005621	44022	-	NM_001127361|RNF19B|127544|ring finger protein 19B##NM_153341|RNF19B|127544|ring finger protein 19B##AK131439|RNF19B|127544|ring finger protein 19B##AY359883|TMEM54|113452|transmembrane protein 54##AY027543|TMEM54|113452|transmembrane protein 54##BC020497|TMEM54|113452|transmembrane protein 54##BC001418|TMEM54|113452|transmembrane protein 54##BC013953|TMEM54|113452|transmembrane protein 54##NM_033504|TMEM54|113452|transmembrane protein 54##BC023260|TMEM54|113452|transmembrane protein 54##DQ426877|HPCA|3208|hippocalcin##AK313907|HPCA|3208|hippocalcin##BC001777|HPCA|3208|hippocalcin##NM_002143|HPCA|3208|hippocalcin##AB451267|AK2|204|adenylate kinase 2##AB451394|AK2|204|adenylate kinase 2##AY080900|AK2|204|adenylate kinase 2##U54645|AK2|204|adenylate kinase 2##BC009405|AK2|204|adenylate kinase 2##AK307731|AK2|204|adenylate kinase 2##AK295105|AK2|204|adenylate kinase 2##AK296863|AK2|204|adenylate kinase 2##BC026705|AK2|204|adenylate kinase 2##AK291676|AK2|204|adenylate kinase 2##AK297036|AK2|204|adenylate kinase 2##BC070127|AK2|204|adenylate kinase 2##BC090040|AK2|204|adenylate kinase 2##U84371|AK2|204|adenylate kinase 2##U39945|AK2|204|adenylate kinase 2##AY080899|AK2|204|adenylate kinase 2##AB005621|AK2|204|adenylate kinase 2	0.0	
chr14	25287109	25287232	reg1035599.p2	3.813	+	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-183752	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-208309	-	AB590242 CR456807 CR541704 DQ893067 DQ896320 M16117 TSC_hg19_v1_chr14_-_25045457 AK225914 BC014460 NM_001911	-241724	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	232068	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1779818	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	3949058	+	AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##CR456807|CTSG|1511|cathepsin G##CR541704|CTSG|1511|cathepsin G##DQ893067|CTSG|1511|cathepsin G##DQ896320|CTSG|1511|cathepsin G##M16117|CTSG|1511|cathepsin G##AK225914|CTSG|1511|cathepsin G##BC014460|CTSG|1511|cathepsin G##NM_001911|CTSG|1511|cathepsin G##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1	0.77104	CTCF.p2:24:0.771
chr15	60878233	60878333	reg1013908.p2	3.813	+	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-107009	-	AB587463 BC068065 BC009564 BC021114 BC052567 BC001388 BC013843 D00017 TSC_hg19_v1_chr15_-_60690186 AK222542 BX640598 AK297923 BC015834 BC023990 BC066955 BC093056 D28364 NM_001002857 NM_001002858 NM_001136015 NM_004039 AK309956 BC016774	-188122	-	TSC_hg19_v1_chr15_+_60296509 AK314075	-581734	+	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	6396	-	U04899 U04898 NM_002943 NM_134260	41402	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	643141	-	BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##BC068065|ANXA2|302|annexin A2##BC009564|ANXA2|302|annexin A2##BC021114|ANXA2|302|annexin A2##BC052567|ANXA2|302|annexin A2##BC001388|ANXA2|302|annexin A2##BC013843|ANXA2|302|annexin A2##D00017|ANXA2|302|annexin A2##AK222542|ANXA2|302|annexin A2##BX640598|ANXA2|302|annexin A2##AK297923|ANXA2|302|annexin A2##BC015834|ANXA2|302|annexin A2##BC023990|ANXA2|302|annexin A2##BC066955|ANXA2|302|annexin A2##BC093056|ANXA2|302|annexin A2##D28364|ANXA2|302|annexin A2##NM_001002857|ANXA2|302|annexin A2##NM_001002858|ANXA2|302|annexin A2##NM_001136015|ANXA2|302|annexin A2##NM_004039|ANXA2|302|annexin A2##BC016774|ANXA2|302|annexin A2##AK314075|FOXB1|27023|forkhead box B1##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A	0.999242	
chr3	29194039	29194178	reg1036798.p1	3.813	+	NM_001040432	-762122	+	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	-803547	-	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	-803726	-	NM_001003792 NM_001003793 NM_001177711 NM_001177712 NM_014483 BC030290 AY236871 AY236872 AF023259 BC117315 BC143521 TSC_hg19_v1_chr3_+_29323119 AK292789	128856	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	1453914	+	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	1454295	+	NM_001040432|ZCWPW2|152098|zinc finger, CW type with PWWP domain 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2##NM_001003792|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001003793|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177711|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_001177712|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##NM_014483|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236871|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AY236872|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AF023259|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC117315|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC143521|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##AK292789|RBMS3|27303|RNA binding motif, single stranded interacting protein 3##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)	0.926022	CTCF.p2:-9:0.926
chr7	41849830	41850011	reg1033060.p2	3.813	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-107235	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1675311	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1675389	+	NM_000168	426697	-	TSC_hg19_v1_chr7_-_42276797 AK308429	426875	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	1101669	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.0	
chr10	73407434	73407538	reg1038980.p1	3.812	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	-250748	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-328440	+	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	-328461	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	72106	-	AK074172 NM_001168390	90094	-	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	125820	-	BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54	0.019179	
chr11	47600493	47600618	reg1042256.p1	3.812	+	TSC_hg19_v1_chr11_-_47600522 AL713735 AK001749 BC002736 AK222550 AK225062 NM_016506 AK001312 AF151086 AK222985 NM_018095	-41	-	TSC_hg19_v1_chr11_-_47600240 AK091607	-281	-	TSC_hg19_v1_chr11_+_47587150 AK294640 BC107573 BC020242 CU676524 AY333987 EU831440 EU831532	-13399	+	NM_004551 TSC_hg19_v1_chr11_+_47600625 BC000617	38	+	TSC_hg19_v1_chr11_+_47600628 AK223255 AK313802 AF067139 AF100743	74	+	TSC_hg19_v1_chr11_+_47600632 AK294167 DQ891934 DQ895121	82	+	AL713735|KBTBD4|55709|kelch repeat and BTB (POZ) domain containing 4##AK001749|KBTBD4|55709|kelch repeat and BTB (POZ) domain containing 4##BC002736|KBTBD4|55709|kelch repeat and BTB (POZ) domain containing 4##AK222550|KBTBD4|55709|kelch repeat and BTB (POZ) domain containing 4##AK225062|KBTBD4|55709|kelch repeat and BTB (POZ) domain containing 4##NM_016506|KBTBD4|55709|kelch repeat and BTB (POZ) domain containing 4##AK001312|KBTBD4|55709|kelch repeat and BTB (POZ) domain containing 4##AF151086|KBTBD4|55709|kelch repeat and BTB (POZ) domain containing 4##AK222985|KBTBD4|55709|kelch repeat and BTB (POZ) domain containing 4##NM_018095|KBTBD4|55709|kelch repeat and BTB (POZ) domain containing 4##AK091607|KBTBD4|55709|kelch repeat and BTB (POZ) domain containing 4##AK294640|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##BC107573|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##BC020242|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##AY333987|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##EU831440|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##EU831532|PTPMT1|114971|protein tyrosine phosphatase, mitochondrial 1##NM_004551|NDUFS3|4722|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)##BC000617|NDUFS3|4722|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)##AK223255|NDUFS3|4722|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)##AK313802|NDUFS3|4722|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)##AF067139|NDUFS3|4722|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)##AF100743|NDUFS3|4722|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)##AK294167|NDUFS3|4722|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)##DQ891934|NDUFS3|4722|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)##DQ895121|NDUFS3|4722|NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)	0.0	
chr11	68934232	68934377	reg1027317.p2	3.812	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-76778	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-117878	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-117954	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	127318	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	521552	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	521606	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.10674	
chr1	172050981	172051162	reg1034944.p2	3.812	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-240368	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-300233	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-300257	+	AL035295 NM_139240 BC038410	338757	+	TSC_hg19_v1_chr1_-_172413202 BC006539	362117	-	TSC_hg19_v1_chr1_-_172413207 AK308201	362136	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.0	
chr1	181031386	181031453	reg1036320.p1	3.812	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-28269	+	AF010446 AJ249778 BC012485 U22963 TSC_hg19_v1_chr1_+_181003139	-28280	+	AK304645 AK290374 TSC_hg19_v1_chr1_+_181003128 AK222910	-28318	+	NM_016545	26218	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	26446	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	421281	+	AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##AF010446|MR1|3140|major histocompatibility complex, class I-related##AJ249778|MR1|3140|major histocompatibility complex, class I-related##BC012485|MR1|3140|major histocompatibility complex, class I-related##U22963|MR1|3140|major histocompatibility complex, class I-related##AK304645|MR1|3140|major histocompatibility complex, class I-related##AK290374|MR1|3140|major histocompatibility complex, class I-related##AK222910|MR1|3140|major histocompatibility complex, class I-related##NM_016545|IER5|51278|immediate early response 5##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit	0.0	
chr1	27943122	27943212	reg1035709.p1	3.812	+	BC064935 TSC_hg19_v1_chr1_-_27930394	-12790	-	BC042058 NM_001029882	-13046	-	TSC_hg19_v1_chr1_-_27816676 NM_001201404 NM_006990	-126491	-	AK125143 TSC_hg19_v1_chr1_-_27952648 NM_001042747	9503	-	M27454 AK301078 BC002836 AK304846 NM_001042729	9908	-	TSC_hg19_v1_chr1_-_27961656 BC064382 AK130188 NM_005248	18519	-	BC064935|AHDC1|27245|AT hook, DNA binding motif, containing 1##NM_001029882|AHDC1|27245|AT hook, DNA binding motif, containing 1##NM_001201404|WASF2|10163|WAS protein family, member 2##NM_006990|WASF2|10163|WAS protein family, member 2##AK125143|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042747|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##M27454|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK301078|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_001042729|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##BC064382|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##AK130188|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog##NM_005248|FGR|2268|Gardner-Rasheed feline sarcoma viral (v-fgr) oncogene homolog	0.022024	
chr16	29801906	29801973	reg1017428.p2	3.812	+	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	-12353	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	-44638	-	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-111457	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	112	+	TSC_hg19_v1_chr16_+_29802074 AK316389 BC028155 BT007259 DQ890771 DQ893652 DQ893932 DQ895829	148	+	FJ532357 TSC_hg19_v1_chr16_+_29817510	15529	+	NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22##AK316389|KIF22|3835|kinesin family member 22##BC028155|KIF22|3835|kinesin family member 22##BT007259|KIF22|3835|kinesin family member 22##DQ890771|KIF22|3835|kinesin family member 22##DQ893652|KIF22|3835|kinesin family member 22##DQ893932|KIF22|3835|kinesin family member 22##DQ895829|KIF22|3835|kinesin family member 22##FJ532357|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)	0.0	
chr19	1251473	1251596	reg1032247.p1	3.812	+	TSC_hg19_v1_chr19_+_1249886 BC060848 BC094778	-1650	+	TSC_hg19_v1_chr19_+_1248581 NM_177401	-2960	+	TSC_hg19_v1_chr19_+_1241811 BC050458 BC018079 CR542218	-9701	+	TSC_hg19_v1_chr19_+_1269330 NM_001280 AK095781 AK304185 AK304470 AK311601 AK128423 AF021336 AK094781 D78134 BC000901 BC000403	17771	+	CU674448 AB528491 EU176219 EU176522 AB451225 AB451348 BT007210 TSC_hg19_v1_chr19_+_1270968	19415	+	TSC_hg19_v1_chr19_+_1275540 NM_017914 BC000890 BC012080	24033	+	BC060848|MIDN|90007|midnolin##BC094778|MIDN|90007|midnolin##NM_177401|MIDN|90007|midnolin##BC050458|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##BC018079|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##CR542218|ATP5D|513|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit##NM_001280|CIRBP|1153|cold inducible RNA binding protein##AK095781|CIRBP|1153|cold inducible RNA binding protein##AK304185|CIRBP|1153|cold inducible RNA binding protein##AK304470|CIRBP|1153|cold inducible RNA binding protein##AK311601|CIRBP|1153|cold inducible RNA binding protein##AK128423|CIRBP|1153|cold inducible RNA binding protein##AF021336|CIRBP|1153|cold inducible RNA binding protein##AK094781|CIRBP|1153|cold inducible RNA binding protein##D78134|CIRBP|1153|cold inducible RNA binding protein##BC000901|CIRBP|1153|cold inducible RNA binding protein##BC000403|CIRBP|1153|cold inducible RNA binding protein##EU176219|CIRBP|1153|cold inducible RNA binding protein##EU176522|CIRBP|1153|cold inducible RNA binding protein##AB451225|CIRBP|1153|cold inducible RNA binding protein##AB451348|CIRBP|1153|cold inducible RNA binding protein##BT007210|CIRBP|1153|cold inducible RNA binding protein##NM_017914|C19orf24|55009|chromosome 19 open reading frame 24##BC000890|C19orf24|55009|chromosome 19 open reading frame 24##BC012080|C19orf24|55009|chromosome 19 open reading frame 24	0.0	
chr19	38535477	38535565	reg1033524.p2	3.812	+	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	-137609	+	TSC_hg19_v1_chr19_+_38397847 NM_015073	-137664	+	AK302913 AY026504 AK128826 NM_031951	-138247	-	AB463560 GQ358728 BC125152 BC125153 U43843 AK308563 NM_001135155 NM_004647	179314	-	BC021191 TSC_hg19_v1_chr19_-_38720320 NM_001135156	184795	-	TSC_hg19_v1_chr19_-_38720336 AK297581	184813	-	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##AK302913|WDR87|83889|WD repeat domain 87##AY026504|WDR87|83889|WD repeat domain 87##AK128826|WDR87|83889|WD repeat domain 87##NM_031951|WDR87|83889|WD repeat domain 87##GQ358728|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125152|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125153|DPF1|8193|D4, zinc and double PHD fingers family 1##U43843|DPF1|8193|D4, zinc and double PHD fingers family 1##AK308563|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135155|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_004647|DPF1|8193|D4, zinc and double PHD fingers family 1##BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1##AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1	0.368601	CTCF.p2:2:0.369
chr3	4876072	4876252	reg1034865.p1	3.812	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-340966	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-341034	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-341131	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	144954	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	145019	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	145192	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.0	
chr11	100446289	100446378	reg1030098.p2	3.811	+	AB013802 AB013803 NM_175566	-1019460	+	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	-1554584	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-4323159	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	111795	+	AK314174 AF247167 NM_032021	416431	+	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	553466	-	AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor	0.855522	CTCF.p2:-14:0.856
chr11	19836075	19836174	reg1030567.p1	3.811	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	-101258	+	AB063115 NM_001111018 AJ488205	-463809	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-572923	-	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	208264	+	TSC_hg19_v1_chr11_+_20049136 AK307574	213008	+	AK290458 TSC_hg19_v1_chr11_+_20070637	234499	+	AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##AK290458|NAV2|89797|neuron navigator 2	0.0	
chr11	61495865	61495962	reg1033340.p2	3.811	+	TSC_hg19_v1_chr11_+_61447896 BC150176 BC150195 NM_006133 AB014559 BC152453	-48032	+	TSC_hg19_v1_chr11_-_61348549 BC125170 BC125171 NM_001252065 NM_004200	-147386	-	NM_001145077	-219642	+	TSC_hg19_v1_chr11_+_61520107 AB023171 NM_001127392 AB385408	24194	+	AF086762 NM_013279	26947	+	TSC_hg19_v1_chr11_-_61560064 BC002750 AF085986 AK291683 AF086763 BC015968 AF070661 NM_014206	64157	-	BC150176|DAGLA|747|diacylglycerol lipase, alpha##BC150195|DAGLA|747|diacylglycerol lipase, alpha##NM_006133|DAGLA|747|diacylglycerol lipase, alpha##AB014559|DAGLA|747|diacylglycerol lipase, alpha##BC152453|DAGLA|747|diacylglycerol lipase, alpha##BC125170|SYT7|9066|synaptotagmin VII##BC125171|SYT7|9066|synaptotagmin VII##NM_001252065|SYT7|9066|synaptotagmin VII##NM_004200|SYT7|9066|synaptotagmin VII##NM_001145077|LRRC10B|390205|leucine rich repeat containing 10B##AB023171|C11orf9|745|chromosome 11 open reading frame 9##NM_001127392|C11orf9|745|chromosome 11 open reading frame 9##AF086762|C11orf9|745|chromosome 11 open reading frame 9##NM_013279|C11orf9|745|chromosome 11 open reading frame 9##BC002750|C11orf10|746|chromosome 11 open reading frame 10##AF085986|C11orf10|746|chromosome 11 open reading frame 10##AK291683|C11orf10|746|chromosome 11 open reading frame 10##AF086763|C11orf10|746|chromosome 11 open reading frame 10##BC015968|C11orf10|746|chromosome 11 open reading frame 10##AF070661|C11orf10|746|chromosome 11 open reading frame 10##NM_014206|C11orf10|746|chromosome 11 open reading frame 10	0.0	
chr1	218534823	218534932	reg1033313.p2	3.811	+	M19154 TSC_hg19_v1_chr1_+_218519634	-15272	+	NM_001135599 NM_003238 TSC_hg19_v1_chr1_+_218518677 AB209842	-16166	+	AK290066 BC003668 TSC_hg19_v1_chr1_+_218458652 BC020641 AF151873	-76208	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	812281	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	812365	+	BC036078 TSC_hg19_v1_chr1_-_220101540	1566652	-	M19154|TGFB2|7042|transforming growth factor, beta 2##NM_001135599|TGFB2|7042|transforming growth factor, beta 2##NM_003238|TGFB2|7042|transforming growth factor, beta 2##AB209842|TGFB2|7042|transforming growth factor, beta 2##AK290066|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC003668|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##BC020641|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##AF151873|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##BC036078|SLC30A10|55532|solute carrier family 30, member 10	0.111608	
chr15	32091819	32091958	reg1025676.p1	3.811	+	AJ430383 NM_130901	-144347	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-472550	+	NM_001243538	-568839	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	70941	-	TSC_hg19_v1_chr15_-_32162898 AK126002	71055	-	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	230855	+	AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A##AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7	0.2748	CTCF.p2:-84:0.275
chr15	34286349	34286441	reg1035661.p2	3.811	+	AK095198 NM_012125	-25307	+	TSC_hg19_v1_chr15_-_34212524 BC037796	-73837	-	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	-683226	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	44917	-	BC012456 TSC_hg19_v1_chr15_-_34394064 AJ250344 NM_020154 AY358445	107646	-	TSC_hg19_v1_chr15_-_34394073 AJ245874 AK314883 BC104934 BC104936	107708	-	AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor##BC012456|C15orf24|56851|chromosome 15 open reading frame 24##AJ250344|C15orf24|56851|chromosome 15 open reading frame 24##NM_020154|C15orf24|56851|chromosome 15 open reading frame 24##AY358445|C15orf24|56851|chromosome 15 open reading frame 24##AJ245874|C15orf24|56851|chromosome 15 open reading frame 24##AK314883|C15orf24|56851|chromosome 15 open reading frame 24##BC104934|C15orf24|56851|chromosome 15 open reading frame 24##BC104936|C15orf24|56851|chromosome 15 open reading frame 24	0.826444	CTCF.p2:17:0.826
chr15	84540995	84541174	reg1031909.p2	3.811	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-218257	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-424856	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-425024	+	NM_001243531	300157	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	603197	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	656388	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.0	
chr19	14115796	14115943	reg1030900.p1	3.811	+	AK027100 AK298489 NM_001146254 NM_001146255	-51672	-	BC080575 NM_138353 TSC_hg19_v1_chr19_+_14063318	-52551	+	TSC_hg19_v1_chr19_+_14063308 AK093072 AX747902	-52571	+	TSC_hg19_v1_chr19_-_14116878 X58964	1045	-	BC049826 TSC_hg19_v1_chr19_-_14117133 AK309824 NM_002918	1260	-	BC140935 AB076563 AF447451 BC110069 NM_080864	23118	+	AK027100|PODNL1|79883|podocan-like 1##AK298489|PODNL1|79883|podocan-like 1##NM_001146254|PODNL1|79883|podocan-like 1##NM_001146255|PODNL1|79883|podocan-like 1##BC080575|DCAF15|90379|DDB1 and CUL4 associated factor 15##NM_138353|DCAF15|90379|DDB1 and CUL4 associated factor 15##AK093072|DCAF15|90379|DDB1 and CUL4 associated factor 15##X58964|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##BC049826|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##AK309824|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##NM_002918|RFX1|5989|regulatory factor X, 1 (influences HLA class II expression)##BC140935|RLN3|117579|relaxin 3##AB076563|RLN3|117579|relaxin 3##AF447451|RLN3|117579|relaxin 3##BC110069|RLN3|117579|relaxin 3##NM_080864|RLN3|117579|relaxin 3	0.0	
chr20	37489095	37489190	reg1033838.p1	3.811	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	-54788	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	-112030	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-135983	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	65847	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	65926	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	101847	+	AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35	0.0	
chr2	59089411	59089550	reg1031258.p2	3.811	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-620998	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-815492	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-815726	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	1691042	-	AF080216 TSC_hg19_v1_chr2_-_60780784	1691298	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	1894004	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.298445	CTCF.p2:-71:0.298
chr2	62532779	62532909	reg1030419.p1	3.811	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-109578	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-400015	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-417058	-	BC047439 AK091902 AX747245 NM_198276	200695	-	AK292545 NM_001142615	368141	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	400122	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr3	46954592	46954724	reg1034829.p1	3.811	+	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	-30916	+	BC112221 BC112247 NM_000316 U17418 X68596	-35409	+	AF174483 CU679491 X07373 M24122 AK312044 BC009790 NM_000258	-49733	-	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	63587	-	TSC_hg19_v1_chr3_+_47021155 NM_015175 AK131104 AB384492	66589	+	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	74812	+	BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor##BC112221|PTH1R|5745|parathyroid hormone 1 receptor##BC112247|PTH1R|5745|parathyroid hormone 1 receptor##NM_000316|PTH1R|5745|parathyroid hormone 1 receptor##U17418|PTH1R|5745|parathyroid hormone 1 receptor##X68596|PTH1R|5745|parathyroid hormone 1 receptor##AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12##NM_015175|NBEAL2|23218|neurobeachin-like 2##AK131104|NBEAL2|23218|neurobeachin-like 2##AK092871|NBEAL2|23218|neurobeachin-like 2	0.0	
chr4	1209442	1209540	reg1019863.p2	3.811	+	CR627052 NM_001199021	-6742	-	BC104228 BC104229 BC112991 BC112992 BC044945 AK091779 AX747178 TSC_hg19_v1_chr4_-_1195337	-14249	-	TSC_hg19_v1_chr4_-_1166969 NM_001128325	-42513	-	AB527760 DQ891918 DQ895102 TSC_hg19_v1_chr4_-_1242878 AF091555 BC011655 U37408	33319	-	TSC_hg19_v1_chr4_-_1242910 BC072021 BC053320 NM_001012614 NM_001328 BC098400	33417	-	TSC_hg19_v1_chr4_+_1243060 AK125775 AK056133	33677	+	CR627052|LOC100130872|100130872|uncharacterized LOC100130872##NM_001199021|SPON2|10417|spondin 2, extracellular matrix protein##BC104228|LOC100130872|100130872|uncharacterized LOC100130872##BC104229|LOC100130872|100130872|uncharacterized LOC100130872##BC112991|LOC100130872|100130872|uncharacterized LOC100130872##BC112992|LOC100130872|100130872|uncharacterized LOC100130872##BC044945|LOC100130872|100130872|uncharacterized LOC100130872##AK091779|LOC100130872|100130872|uncharacterized LOC100130872##NM_001128325|SPON2|10417|spondin 2, extracellular matrix protein##DQ891918|CTBP1|1487|C-terminal binding protein 1##DQ895102|CTBP1|1487|C-terminal binding protein 1##AF091555|CTBP1|1487|C-terminal binding protein 1##BC011655|CTBP1|1487|C-terminal binding protein 1##U37408|CTBP1|1487|C-terminal binding protein 1##BC072021|CTBP1|1487|C-terminal binding protein 1##BC053320|CTBP1|1487|C-terminal binding protein 1##NM_001012614|CTBP1|1487|C-terminal binding protein 1##NM_001328|CTBP1|1487|C-terminal binding protein 1##BC098400|CTBP1|1487|C-terminal binding protein 1##AK125775|C4orf42|92070|chromosome 4 open reading frame 42##AK056133|C4orf42|92070|chromosome 4 open reading frame 42	0.0	
chr5	107149460	107149595	reg1036911.p2	3.811	+	AK308672 NM_001962 U26403	-142937	-	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-4251046	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4555070	+	TSC_hg19_v1_chr5_-_107717106 AK126722	567603	-	BC063316 NM_001163315	568271	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	914453	-	AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AB593118|HP07349|100652853|uncharacterized protein HP07349	0.0	
chr5	111452124	111452232	reg1037715.p1	3.811	+	AK298779 NM_001142474 NM_001142475	-139604	-	NM_001142477 TSC_hg19_v1_chr5_-_111093886 NM_001142476	-358325	-	NM_001142479 NM_001142480 BC011050 TSC_hg19_v1_chr5_-_111093377 NM_001142478	-358820	-	TSC_hg19_v1_chr5_+_111496560 AB002437	44391	+	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	302695	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	591033	+	AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142479|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142480|C5orf13|9315|chromosome 5 open reading frame 13##BC011050|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142478|C5orf13|9315|chromosome 5 open reading frame 13##AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli	0.0	
chr5	175298851	175298968	reg1033353.p1	3.811	+	TSC_hg19_v1_chr5_+_175298607 AK293819	-299	+	TSC_hg19_v1_chr5_+_175298551 AK314177	-364	+	TSC_hg19_v1_chr5_+_175298517 AY576870 NM_001008220 AK124837	-400	+	TSC_hg19_v1_chr5_+_175308843 AL512758 AK126590	10016	+	TSC_hg19_v1_chr5_-_175395273 BC068499 BC066325 BC006849	96243	-	NM_032361	96635	-	AK293819|CPLX2|10814|complexin 2##AK314177|CPLX2|10814|complexin 2##AY576870|CPLX2|10814|complexin 2##NM_001008220|CPLX2|10814|complexin 2##AK124837|CPLX2|10814|complexin 2##AL512758|CPLX2|10814|complexin 2##AK126590|CPLX2|10814|complexin 2##BC068499|THOC3|84321|THO complex 3##BC066325|THOC3|84321|THO complex 3##BC006849|THOC3|84321|THO complex 3##NM_032361|THOC3|84321|THO complex 3	0.0	
chr5	21663326	21663425	reg1036769.p2	3.811	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	-203727	+	TSC_hg19_v1_chr5_+_21459621 AK290693	-203766	+	AK295087 BC031051 NM_001167667 NM_004934	-1675053	-	TSC_hg19_v1_chr5_-_22212879 AK314800	549506	-	BC047608 TSC_hg19_v1_chr5_-_22853454	1190071	-	L33477 NM_004061	1190355	-	BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	0.167646	
chr6	105933516	105933696	reg1010677.p3	3.811	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-82611	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-82648	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-82760	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	600590	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	600629	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	613198	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.0	
chr6	16129653	16129783	reg1002696.p4	3.811	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-281	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	-416	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-466428	-	TSC_hg19_v1_chr6_+_16143281 AK026739	13592	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	109133	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	631979	-	BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1	0.067553	
chr9	107888605	107888763	reg1039594.p2	3.811	+	NM_005502 TSC_hg19_v1_chr9_-_107690527	-198155	-	AK024328 TSC_hg19_v1_chr9_-_107690437 AF258627	-198204	-	BC146856 TSC_hg19_v1_chr9_-_107690419 AF285167 BC034824 BC141816 BC142693 AK022254	-198300	-	TSC_hg19_v1_chr9_+_108006931 NM_080546	118229	+	TSC_hg19_v1_chr9_+_108006937 AJ272365	118267	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	118383	+	NM_005502|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AK024328|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF258627|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC146856|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##AF285167|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##BC034824|ABCA1|19|ATP-binding cassette, sub-family A (ABC1), member 1##NM_080546|SLC44A1|23446|solute carrier family 44, member 1##AJ272365|SLC44A1|23446|solute carrier family 44, member 1##AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1	0.0	
chr10	51924905	51925032	reg1037124.p1	3.810	+	NM_018232	-87083	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-97246	+	TSC_hg19_v1_chr10_+_51827685 BC150611 AK001686 NM_001005751 AK295129	-97288	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	83372	-	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	458735	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	574742	+	NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##BC150611|FAM21C|253725|family with sequence similarity 21, member C##AK001686|FAM21A|387680|family with sequence similarity 21, member A##NM_001005751|FAM21A|387680|family with sequence similarity 21, member A##AK295129|FAM21A|387680|family with sequence similarity 21, member A##AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B	0.741407	CTCF.p2:-9:0.741
chr10	93149299	93149397	reg1007759.p1	3.810	+	TSC_hg19_v1_chr10_+_92980539 AL832496	-168814	+	TSC_hg19_v1_chr10_+_92980445 NM_032373	-168940	+	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	-226586	+	BC071762 TSC_hg19_v1_chr10_+_93170064	20710	+	TSC_hg19_v1_chr10_+_93170100 NM_173497 NM_182765 AK295723 AK094625 BC040187 EU832472 EU832551 BX537856	20833	+	AK299392 TSC_hg19_v1_chr10_-_93392761 BC012625	243413	-	AL832496|PCGF5|84333|polycomb group ring finger 5##NM_032373|PCGF5|84333|polycomb group ring finger 5##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5##NM_173497|HECTD2|143279|HECT domain containing 2##NM_182765|HECTD2|143279|HECT domain containing 2##AK295723|HECTD2|143279|HECT domain containing 2##AK094625|HECTD2|143279|HECT domain containing 2##BC040187|HECTD2|143279|HECT domain containing 2##EU832472|HECTD2|143279|HECT domain containing 2##EU832551|HECTD2|143279|HECT domain containing 2##BX537856|HECTD2|143279|HECT domain containing 2##AK299392|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C##BC012625|PPP1R3C|5507|protein phosphatase 1, regulatory subunit 3C	0.0	
chr11	44623201	44623381	reg1034969.p2	3.810	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-36064	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-36126	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-291615	-	NM_130783	162684	+	TSC_hg19_v1_chr11_-_44956087 AF010315	332816	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	349126	-	AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_130783|TSPAN18|90139|tetraspanin 18##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11	0.0	
chr12	102253683	102253863	reg1030768.p2	3.810	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	-29187	-	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	-120554	-	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	-162151	+	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	17345	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	17685	+	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	201977	-	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1##CR457171|CCDC53|51019|coiled-coil domain containing 53	0.0	
chr12	48111440	48111534	reg1039624.p1	3.810	+	TSC_hg19_v1_chr12_-_48099819 NM_001146075 NM_001146076 NM_024604	-11656	-	TSC_hg19_v1_chr12_-_48099814 BC003680	-11673	-	TSC_hg19_v1_chr12_-_48099790 BC056415 AK025561 AK299465	-11720	-	AK314688 BC069715 BC069698 BC074763 AX772808 AK300169 AK075446 BC111782 M32402 M36109 NM_001172439 NM_001172440 NM_006025	7802	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	40922	-	AK092448 NM_001098531	41387	-	NM_001146075|RPAP3|79657|RNA polymerase II associated protein 3##NM_001146076|RPAP3|79657|RNA polymerase II associated protein 3##NM_024604|RPAP3|79657|RNA polymerase II associated protein 3##BC003680|RPAP3|79657|RNA polymerase II associated protein 3##BC056415|RPAP3|79657|RNA polymerase II associated protein 3##AK025561|RPAP3|79657|RNA polymerase II associated protein 3##AK299465|RPAP3|79657|RNA polymerase II associated protein 3##AK314688|ENDOU|8909|endonuclease, polyU-specific##BC069715|ENDOU|8909|endonuclease, polyU-specific##BC069698|ENDOU|8909|endonuclease, polyU-specific##BC074763|ENDOU|8909|endonuclease, polyU-specific##AX772808|ENDOU|8909|endonuclease, polyU-specific##AK300169|ENDOU|8909|endonuclease, polyU-specific##AK075446|ENDOU|8909|endonuclease, polyU-specific##BC111782|ENDOU|8909|endonuclease, polyU-specific##M32402|ENDOU|8909|endonuclease, polyU-specific##M36109|ENDOU|8909|endonuclease, polyU-specific##NM_001172439|ENDOU|8909|endonuclease, polyU-specific##NM_001172440|ENDOU|8909|endonuclease, polyU-specific##NM_006025|ENDOU|8909|endonuclease, polyU-specific##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3	0.890938	CTCF.p2:-9:0.485	CTCF.p2:-11:0.406
chr13	31248383	31248541	reg1028152.p2	3.810	+	NM_005800 BC038103 TSC_hg19_v1_chr13_+_31192056 BC036027 AK289826 CR627370 X59131 BC012594 AL832776	-56499	+	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	-56835	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	-208404	-	AK314143 NM_001204406	39152	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	61202	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	61253	+	NM_005800|USPL1|10208|ubiquitin specific peptidase like 1##BC038103|USPL1|10208|ubiquitin specific peptidase like 1##BC036027|USPL1|10208|ubiquitin specific peptidase like 1##AK289826|USPL1|10208|ubiquitin specific peptidase like 1##CR627370|USPL1|10208|ubiquitin specific peptidase like 1##X59131|USPL1|10208|ubiquitin specific peptidase like 1##BC012594|USPL1|10208|ubiquitin specific peptidase like 1##AL832776|USPL1|10208|ubiquitin specific peptidase like 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein	0.0	
chr15	57079198	57079379	reg1034411.p1	3.810	+	TSC_hg19_v1_chr15_-_57025818 BX641000 BX640707 NM_001002843 NM_001002844 NM_017661 AK295159	-53456	-	TSC_hg19_v1_chr15_-_57025690 AB046804 BC053649 BC064359 AK310882 AK289739 BC130451 BC136412	-53576	-	TSC_hg19_v1_chr15_-_56757262 BC031046 AK310029 BC012554 BC034991 AK002084 NM_018365	-322002	-	TSC_hg19_v1_chr15_-_57210733 AK096657 BC036541	131448	-	TSC_hg19_v1_chr15_+_57210823 NM_003205 NM_207036 NM_207037 NM_207038	131539	+	TSC_hg19_v1_chr15_+_57210872 AL831981 AK294617 AK310708 AK312710	131580	+	BX641000|ZNF280D|54816|zinc finger protein 280D##BX640707|ZNF280D|54816|zinc finger protein 280D##NM_001002843|ZNF280D|54816|zinc finger protein 280D##NM_001002844|ZNF280D|54816|zinc finger protein 280D##NM_017661|ZNF280D|54816|zinc finger protein 280D##AK295159|ZNF280D|54816|zinc finger protein 280D##AB046804|ZNF280D|54816|zinc finger protein 280D##BC053649|ZNF280D|54816|zinc finger protein 280D##BC064359|ZNF280D|54816|zinc finger protein 280D##AK310882|ZNF280D|54816|zinc finger protein 280D##AK289739|ZNF280D|54816|zinc finger protein 280D##BC130451|ZNF280D|54816|zinc finger protein 280D##BC136412|ZNF280D|54816|zinc finger protein 280D##BC031046|MNS1|55329|meiosis-specific nuclear structural 1##BC012554|MNS1|55329|meiosis-specific nuclear structural 1##BC034991|MNS1|55329|meiosis-specific nuclear structural 1##AK002084|MNS1|55329|meiosis-specific nuclear structural 1##NM_018365|MNS1|55329|meiosis-specific nuclear structural 1##AK096657|LOC145783|145783|uncharacterized LOC145783##NM_003205|TCF12|6938|transcription factor 12##NM_207036|TCF12|6938|transcription factor 12##NM_207037|TCF12|6938|transcription factor 12##NM_207038|TCF12|6938|transcription factor 12##AL831981|TCF12|6938|transcription factor 12##AK294617|TCF12|6938|transcription factor 12##AK310708|TCF12|6938|transcription factor 12##AK312710|TCF12|6938|transcription factor 12	0.0	
chr16	3830712	3830815	reg1039995.p1	3.810	+	TSC_hg19_v1_chr16_-_3767521 U12595 BC001455 AF043254 AB528744 CU676340 DQ893476 DQ896346 BC000406 BC002994 AF154108 AK299127 BC018950 AK223049 AK223076 AK223205 BC023585 AK093344 NM_016292	-63228	-	NM_005223	-127824	+	TSC_hg19_v1_chr16_-_3661587 NM_032444 AK122775	-169180	-	TSC_hg19_v1_chr16_-_3843474 AK304771	12763	-	AB210043 NM_001079846 NM_004380	99357	-	TSC_hg19_v1_chr16_-_3930711 U47741	99935	-	U12595|TRAP1|10131|TNF receptor-associated protein 1##BC001455|TRAP1|10131|TNF receptor-associated protein 1##AF043254|TRAP1|10131|TNF receptor-associated protein 1##DQ893476|TRAP1|10131|TNF receptor-associated protein 1##DQ896346|TRAP1|10131|TNF receptor-associated protein 1##BC000406|TRAP1|10131|TNF receptor-associated protein 1##BC002994|TRAP1|10131|TNF receptor-associated protein 1##AF154108|TRAP1|10131|TNF receptor-associated protein 1##AK299127|TRAP1|10131|TNF receptor-associated protein 1##BC018950|TRAP1|10131|TNF receptor-associated protein 1##AK223049|TRAP1|10131|TNF receptor-associated protein 1##AK223076|TRAP1|10131|TNF receptor-associated protein 1##AK223205|TRAP1|10131|TNF receptor-associated protein 1##BC023585|TRAP1|10131|TNF receptor-associated protein 1##AK093344|TRAP1|10131|TNF receptor-associated protein 1##NM_016292|TRAP1|10131|TNF receptor-associated protein 1##NM_005223|DNASE1|1773|deoxyribonuclease I##NM_032444|SLX4|84464|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)##AK122775|SLX4|84464|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)##AK304771|CREBBP|1387|CREB binding protein##AB210043|CREBBP|1387|CREB binding protein##NM_001079846|CREBBP|1387|CREB binding protein##NM_004380|CREBBP|1387|CREB binding protein##U47741|CREBBP|1387|CREB binding protein	0.186858	
chr17	46157858	46157951	reg1012969.p2	3.810	+	BX647976 TSC_hg19_v1_chr17_+_46126143	-31763	+	TSC_hg19_v1_chr17_+_46125725 X77366	-32152	+	AL833530 TSC_hg19_v1_chr17_+_46125724	-32180	+	NM_006807 TSC_hg19_v1_chr17_-_46178605	20679	-	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	20917	-	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	27081	+	BX647976|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##X77366|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##NM_006807|CBX1|10951|chromobox homolog 1##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11	0.0	
chr22	20174108	20174244	reg1034200.p1	3.810	+	NM_001243537	-36746	-	TSC_hg19_v1_chr22_+_20119357 AY894890 BC053544 NM_001185024 NM_013373 AK131238	-54743	+	TSC_hg19_v1_chr22_+_20105145 AB587487 CU013156 CU013444	-69019	+	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	81591	-	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	133393	-	NM_001242313	203492	+	NM_001243537|LOC388849|388849|uncharacterized LOC388849##AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8##BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8##AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8##CU013156|RANBP1|5902|RAN binding protein 1##CU013444|RANBP1|5902|RAN binding protein 1##AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_001242313|TMEM191B|728229|transmembrane protein 191B	0.152454	
chr3	118532386	118532541	reg1031979.p1	3.810	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-2368090	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-2368132	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-3190044	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	221070	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	221220	-	AK097667 NM_152538 AK292387	332434	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.0	
chr4	170503539	170503656	reg1036725.p1	3.810	+	TSC_hg19_v1_chr4_-_170192202 NM_020870	-311377	-	AK021429 TSC_hg19_v1_chr4_-_170192108	-311490	-	TSC_hg19_v1_chr4_-_170192099 BC053671	-311550	-	BC015147 BC114491 AB067488 CR933642 AL050385 TSC_hg19_v1_chr4_-_170533735 BC068201 CR936672	30039	-	TSC_hg19_v1_chr4_-_170533762 NM_001199397 NM_001199398 NM_001199399 NM_001199400 NM_012224	30172	-	TSC_hg19_v1_chr4_+_170541683 NM_001243372 NM_001829 NM_173872	38074	+	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1##AK021429|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1##BC015147|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC114491|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AB067488|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR933642|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AL050385|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC068201|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR936672|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199397|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199398|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199399|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199400|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_012224|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001243372|CLCN3|1182|chloride channel 3##NM_001829|CLCN3|1182|chloride channel 3##NM_173872|CLCN3|1182|chloride channel 3	0.0	
chr6	134568659	134568839	reg1035699.p2	3.810	+	TSC_hg19_v1_chr6_-_134498984 FM205708 AK293383 NM_001143677	-69757	-	NM_001143678 AK298688	-71651	-	FM205707 TSC_hg19_v1_chr6_-_134496850	-71888	-	AK055077 NM_001143676	70446	-	TSC_hg19_v1_chr6_+_134758857 AK055166	190099	+	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	702483	-	FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143678|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK298688|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205707|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK055166|LOC154092|154092|uncharacterized LOC154092##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1	0.0	
chr7	77533063	77533186	reg1036467.p2	3.810	+	BC022419 NM_001127357 NM_001127359 NM_020432 AL831969 BC127093 BC127094 AB463202 AM392983 AM393200 CU688318 CU692612	-63615	+	BC067742 TSC_hg19_v1_chr7_+_77428204 AL136883	-104914	+	TSC_hg19_v1_chr7_+_77428194 NM_001127358 NM_001127360 AK225854 AK090643 AX746556 AK308289	-104983	+	AB014605 BC150277 AK297353 AF038563 NM_012301	1549755	-	TSC_hg19_v1_chr7_+_79083303 AK311103	1550033	+	TSC_hg19_v1_chr7_+_79764166 NM_002069 BC026326 AL049933 AK292953	2231015	+	BC022419|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127357|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127359|PHTF2|57157|putative homeodomain transcription factor 2##NM_020432|PHTF2|57157|putative homeodomain transcription factor 2##AL831969|PHTF2|57157|putative homeodomain transcription factor 2##BC127093|PHTF2|57157|putative homeodomain transcription factor 2##BC127094|PHTF2|57157|putative homeodomain transcription factor 2##AM392983|PHTF2|57157|putative homeodomain transcription factor 2##AM393200|PHTF2|57157|putative homeodomain transcription factor 2##BC067742|PHTF2|57157|putative homeodomain transcription factor 2##AL136883|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127358|PHTF2|57157|putative homeodomain transcription factor 2##NM_001127360|PHTF2|57157|putative homeodomain transcription factor 2##AK225854|PHTF2|57157|putative homeodomain transcription factor 2##AK090643|PHTF2|57157|putative homeodomain transcription factor 2##AK308289|PHTF2|57157|putative homeodomain transcription factor 2##AB014605|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##BC150277|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK297353|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AF038563|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##NM_012301|MAGI2|9863|membrane associated guanylate kinase, WW and PDZ domain containing 2##AK311103|MAGI2-AS3|100505881|MAGI2 antisense RNA 3 (non-protein coding)##NM_002069|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##BC026326|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AL049933|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1##AK292953|GNAI1|2770|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1	0.0	
chr8	134511470	134511591	reg1022687.p2	3.810	+	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-202033	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-308200	+	NM_001045556 NM_001045557	-396221	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	72567	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1197264	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1213549	-	AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr9	20622679	20622782	reg1026003.p4	3.810	+	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	-234	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	-282	-	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	-835779	-	AK056522 AY139834 NM_017794	35577	+	BC114215 TSC_hg19_v1_chr9_-_21031636 BX648779 NM_001010915	408901	-	AB451491 AB451323 AB451452 BC069314 BC096150 BC096151 BC096152 BC096153 V00547 AB587428 V00546 M25460 M28622 NM_002176	455143	-	AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK056522|KIAA1797|54914|KIAA1797##AY139834|KIAA1797|54914|KIAA1797##NM_017794|KIAA1797|54914|KIAA1797##BC114215|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##BX648779|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##NM_001010915|PTPLAD2|401494|protein tyrosine phosphatase-like A domain containing 2##AB451323|IFNB1|3456|interferon, beta 1, fibroblast##AB451452|IFNB1|3456|interferon, beta 1, fibroblast##BC069314|IFNB1|3456|interferon, beta 1, fibroblast##BC096150|IFNB1|3456|interferon, beta 1, fibroblast##BC096151|IFNB1|3456|interferon, beta 1, fibroblast##BC096152|IFNB1|3456|interferon, beta 1, fibroblast##BC096153|IFNB1|3456|interferon, beta 1, fibroblast##V00547|IFNB1|3456|interferon, beta 1, fibroblast##V00546|IFNB1|3456|interferon, beta 1, fibroblast##M25460|IFNB1|3456|interferon, beta 1, fibroblast##M28622|IFNB1|3456|interferon, beta 1, fibroblast##NM_002176|IFNB1|3456|interferon, beta 1, fibroblast	0.0	
chr11	26673629	26673803	reg1037331.p1	3.809	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	-79976	-	NM_031418 AK302659	-319986	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-2155067	+	BC049207 NM_178498	69843	-	NM_203371 TSC_hg19_v1_chr11_+_27015658	341926	+	TSC_hg19_v1_chr11_+_27015673 AK310616	341954	+	AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)	0.0	
chr12	50020043	50020129	reg1036704.p2	3.809	+	TSC_hg19_v1_chr12_+_50017344 AK123353 BC050398 AL834216 NM_012272	-2715	+	AM393365 AL136748 BC035621 AK302702 AK093242 AX748009 NM_032130	-20741	-	TSC_hg19_v1_chr12_-_49961916 AK123187 BC011794 NM_006337 BX538079 AK308581	-58168	-	BC067364 NM_001031698	4240	+	AB384661 TSC_hg19_v1_chr12_-_50101046	80924	-	TSC_hg19_v1_chr12_-_50101189 AK128195	81072	-	AK123353|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##BC050398|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AL834216|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_012272|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AM393365|FAM186B|84070|family with sequence similarity 186, member B##AL136748|FAM186B|84070|family with sequence similarity 186, member B##BC035621|FAM186B|84070|family with sequence similarity 186, member B##AK302702|FAM186B|84070|family with sequence similarity 186, member B##AK093242|FAM186B|84070|family with sequence similarity 186, member B##NM_032130|FAM186B|84070|family with sequence similarity 186, member B##BC011794|MCRS1|10445|microspherule protein 1##NM_006337|MCRS1|10445|microspherule protein 1##BX538079|MCRS1|10445|microspherule protein 1##BC067364|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_001031698|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AK128195|FMNL3|91010|formin-like 3	0.098768	
chr16	8912712	8912804	reg1040340.p2	3.809	+	NM_000303 TSC_hg19_v1_chr16_+_8891675 AK296123 U85773 AK300785 AK291537 AK299979 AK311035 AK312532 AK304320 AK296630 BC008310	-21060	+	TSC_hg19_v1_chr16_-_8891497 BC015912 AK225638 AL080088 AK314404 NM_015421 AK093383	-21213	-	TSC_hg19_v1_chr16_+_8814575 AK290501 NM_001127448 AK310771	-98178	+	NM_001042476 BC001333	49494	-	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	50102	-	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	144537	-	NM_000303|PMM2|5373|phosphomannomutase 2##U85773|PMM2|5373|phosphomannomutase 2##AK300785|PMM2|5373|phosphomannomutase 2##AK291537|PMM2|5373|phosphomannomutase 2##AK299979|PMM2|5373|phosphomannomutase 2##AK311035|PMM2|5373|phosphomannomutase 2##AK312532|PMM2|5373|phosphomannomutase 2##AK304320|PMM2|5373|phosphomannomutase 2##AK296630|PMM2|5373|phosphomannomutase 2##BC008310|PMM2|5373|phosphomannomutase 2##BC015912|TMEM186|25880|transmembrane protein 186##AK225638|TMEM186|25880|transmembrane protein 186##AL080088|TMEM186|25880|transmembrane protein 186##AK314404|TMEM186|25880|transmembrane protein 186##NM_015421|TMEM186|25880|transmembrane protein 186##AK093383|TMEM186|25880|transmembrane protein 186##AK290501|ABAT|18|4-aminobutyrate aminotransferase##NM_001127448|ABAT|18|4-aminobutyrate aminotransferase##AK310771|ABAT|18|4-aminobutyrate aminotransferase##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)	0.0	
chr17	1800176	1800311	reg1036851.p1	3.809	+	TSC_hg19_v1_chr17_+_1733335 M63488 AB209732 BC018126 AB385027 HQ258560	-66894	+	TSC_hg19_v1_chr17_+_1733284 NM_002945 AK289704	-66959	+	TSC_hg19_v1_chr17_-_1733157 BC035077 AK095369 NM_052928	-67105	-	BC128608 NM_178568	127934	-	TSC_hg19_v1_chr17_+_1933446 S81752 U34880 AF321876 NM_001383 AK314015 BC096086 BC096087 BC096088 BC096089 BC003099	133178	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	145065	+	M63488|RPA1|6117|replication protein A1, 70kDa##AB209732|RPA1|6117|replication protein A1, 70kDa##BC018126|RPA1|6117|replication protein A1, 70kDa##HQ258560|RPA1|6117|replication protein A1, 70kDa##NM_002945|RPA1|6117|replication protein A1, 70kDa##AK289704|RPA1|6117|replication protein A1, 70kDa##BC035077|SMYD4|114826|SET and MYND domain containing 4##AK095369|SMYD4|114826|SET and MYND domain containing 4##NM_052928|SMYD4|114826|SET and MYND domain containing 4##BC128608|RTN4RL1|146760|reticulon 4 receptor-like 1##NM_178568|RTN4RL1|146760|reticulon 4 receptor-like 1##S81752|DPH1|1801|DPH1 homolog (S. cerevisiae)##U34880|DPH1|1801|DPH1 homolog (S. cerevisiae)##AF321876|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_001383|DPH1|1801|DPH1 homolog (S. cerevisiae)##AK314015|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096086|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096087|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096088|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC096089|DPH1|1801|DPH1 homolog (S. cerevisiae)##BC003099|DPH1|1801|DPH1 homolog (S. cerevisiae)##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2	0.0	
chr19	7794302	7794401	reg1039448.p1	3.809	+	BC064417 BC062591 AK223207 BC014108 M14766 TSC_hg19_v1_chr19_-_7767004 AK310707 AK310071 M15059 NM_001220500 NM_002002 X04772	-27347	-	TSC_hg19_v1_chr19_-_7764328 NM_001207019	-30025	-	TSC_hg19_v1_chr19_+_7745742 BC042161 NM_174894 NM_001042461 BC022836	-48596	+	AY203939 BC093691 BC093693 BC143309 AY423706 NM_001244856 NM_198492	2665	-	AY042221 AY042222 AY042223 AY042224 AY042225 AY042226 AY042227 AY042228 AY042229 AY042230 AY042231 AY042232 AY042233 AB527563 BC110615 AF290886 AK293089 TSC_hg19_v1_chr19_-_7812421 M98457 AK304190 AK313585 NM_001144893 NM_001144894 NM_001144895 NM_001144896 NM_001144897 NM_001144899 NM_021155	18078	-	NM_001144904 NM_001144905 NM_001144906 NM_001144907 NM_001144908 NM_001144909 NM_001144910 NM_001144911 NM_014257 AK292278 BC038851 AF290887 AK304499 AK314704 AB015629 AF245219 AK298084 AK023750 BC110614 AY343913 DQ893779 AY042234 AY042235 AY042236 AY042237 AY042238 AY042239 AY042240	33742	+	BC064417|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC062591|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK223207|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC014108|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M14766|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310707|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310071|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M15059|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_001220500|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_002002|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##X04772|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_001207019|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC042161|TRAPPC5|126003|trafficking protein particle complex 5##NM_174894|TRAPPC5|126003|trafficking protein particle complex 5##NM_001042461|TRAPPC5|126003|trafficking protein particle complex 5##BC022836|TRAPPC5|126003|trafficking protein particle complex 5##AY203939|CLEC4G|339390|C-type lectin domain family 4, member G##BC093691|CLEC4G|339390|C-type lectin domain family 4, member G##BC093693|CLEC4G|339390|C-type lectin domain family 4, member G##BC143309|CLEC4G|339390|C-type lectin domain family 4, member G##AY423706|CLEC4G|339390|C-type lectin domain family 4, member G##NM_001244856|CLEC4G|339390|C-type lectin domain family 4, member G##NM_198492|CLEC4G|339390|C-type lectin domain family 4, member G##AY042221|CD209|30835|CD209 molecule##AY042222|CD209|30835|CD209 molecule##AY042223|CD209|30835|CD209 molecule##AY042224|CD209|30835|CD209 molecule##AY042225|CD209|30835|CD209 molecule##AY042226|CD209|30835|CD209 molecule##AY042227|CD209|30835|CD209 molecule##AY042228|CD209|30835|CD209 molecule##AY042229|CD209|30835|CD209 molecule##AY042230|CD209|30835|CD209 molecule##AY042231|CD209|30835|CD209 molecule##AY042232|CD209|30835|CD209 molecule##AY042233|CD209|30835|CD209 molecule##BC110615|CD209|30835|CD209 molecule##AF290886|CD209|30835|CD209 molecule##AK293089|CD209|30835|CD209 molecule##M98457|CD209|30835|CD209 molecule##AK304190|CD209|30835|CD209 molecule##AK313585|CD209|30835|CD209 molecule##NM_001144893|CD209|30835|CD209 molecule##NM_001144894|CD209|30835|CD209 molecule##NM_001144895|CD209|30835|CD209 molecule##NM_001144896|CD209|30835|CD209 molecule##NM_001144897|CD209|30835|CD209 molecule##NM_001144899|CD209|30835|CD209 molecule##NM_021155|CD209|30835|CD209 molecule##NM_001144904|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144905|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144906|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144907|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144908|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144909|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144910|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144911|CLEC4M|10332|C-type lectin domain family 4, member M##NM_014257|CLEC4M|10332|C-type lectin domain family 4, member M##AK292278|CLEC4M|10332|C-type lectin domain family 4, member M##BC038851|CLEC4M|10332|C-type lectin domain family 4, member M##AF290887|CLEC4M|10332|C-type lectin domain family 4, member M##AK304499|CLEC4M|10332|C-type lectin domain family 4, member M##AK314704|CLEC4M|10332|C-type lectin domain family 4, member M##AB015629|CLEC4M|10332|C-type lectin domain family 4, member M##AF245219|CLEC4M|10332|C-type lectin domain family 4, member M##AK298084|CLEC4M|10332|C-type lectin domain family 4, member M##AK023750|CLEC4M|10332|C-type lectin domain family 4, member M##BC110614|CLEC4M|10332|C-type lectin domain family 4, member M##AY343913|CLEC4M|10332|C-type lectin domain family 4, member M##DQ893779|CLEC4M|10332|C-type lectin domain family 4, member M##AY042234|CLEC4M|10332|C-type lectin domain family 4, member M##AY042235|CLEC4M|10332|C-type lectin domain family 4, member M##AY042236|CLEC4M|10332|C-type lectin domain family 4, member M##AY042237|CLEC4M|10332|C-type lectin domain family 4, member M##AY042238|CLEC4M|10332|C-type lectin domain family 4, member M##AY042239|CLEC4M|10332|C-type lectin domain family 4, member M##AY042240|CLEC4M|10332|C-type lectin domain family 4, member M	0.014148	
chr22	41294893	41295073	reg1008917.p1	3.809	+	AB528124 CU013018 CU013306 CR456468 BC112135 AF085232 NM_145174	-36920	-	TSC_hg19_v1_chr22_+_41253101 NM_001204827 NM_022098 AK301635 BX648018 BC037424 AL365514 BC005331 BC001681 BC004989 AX721172 AK313770 AL834310 CR456442 BC001208 BC023654 BC045166 BC053556 BC011632 AB527238 CR457396 CU013040 CU013328 CU674830	-41863	+	TSC_hg19_v1_chr22_-_41252691 NM_003932	-42293	-	TSC_hg19_v1_chr22_+_41347364 NM_014248	52365	+	TSC_hg19_v1_chr22_+_41347389 BC017370 CR456560 AK315722 AF140598 BC001466 AB590096 AF142059 CU013160 CU013448 CU674722 AF085906 AY099360	52423	+	TSC_hg19_v1_chr22_+_41487787 U01877	192807	+	CU013018|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##CU013306|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##CR456468|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##BC112135|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##AF085232|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##NM_145174|DNAJB7|150353|DnaJ (Hsp40) homolog, subfamily B, member 7##NM_001204827|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##NM_022098|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##AK301635|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BX648018|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC037424|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##AL365514|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC005331|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC001681|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC004989|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##AK313770|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##AL834310|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##CR456442|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC001208|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC023654|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC045166|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC053556|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##BC011632|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##CR457396|XPNPEP3|63929|X-prolyl aminopeptidase (aminopeptidase P) 3, putative##NM_003932|ST13|6767|suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein)##NM_014248|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##BC017370|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CR456560|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AK315722|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF140598|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##BC001466|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF142059|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CU013160|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##CU013448|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AF085906|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##AY099360|RBX1|9978|ring-box 1, E3 ubiquitin protein ligase##U01877|EP300|2033|E1A binding protein p300	0.0	
chr6	23446764	23446863	reg1035548.p1	3.809	+	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	-877088	+	X54394 X54393 GQ305133 M58594 NM_001163558	-1143766	-	BC015850 NM_000948	-1149084	-	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	679617	+	AF181722 NM_181337	910317	+	AF181721 NM_016356	911466	-	NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1##AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2	0.875252	CTCF.p2:15:0.875
chrX	139815763	139815931	reg1007939.p1	3.809	+	TSC_hg19_v1_chrX_+_139791923 AK054978	-23920	+	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	-228595	-	BC137148 BC137149 NM_001013403	-768171	-	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	50805	-	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	268959	+	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	280964	+	AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1	0.0	
chr1	13382758	13382879	reg1037415.p1	3.808	+	NM_001013407 BC101342 BC101344 NM_001010889 BC130274 BC130276	-22993	+	AB464060 NM_001100631 NM_001013692	-51141	-	BC144551 NM_001136561	-198493	-	BC140755 NM_001012276	7937	-	AK124292 NM_001010890 NM_001098376 BC101343 BC137391 BC171794	38364	+	NM_001024661 NM_001099854	69837	-	NM_001013407|PRAMEF5|343068|PRAME family member 5##BC101342|PRAMEF6|440561|PRAME family member 6##BC101344|PRAMEF5|343068|PRAME family member 5##NM_001010889|PRAMEF6|440561|PRAME family member 6##BC130274|PRAMEF5|343068|PRAME family member 5##BC130276|PRAMEF5|343068|PRAME family member 5##NM_001100631|PRAMEF22|653606|PRAME family member 22##NM_001013692|PRAMEF3|401940|PRAME family member 3##BC144551|LOC440563|440563|heterogeneous nuclear ribonucleoprotein C-like##NM_001136561|LOC440563|440563|heterogeneous nuclear ribonucleoprotein C-like##BC140755|PRAMEF7|441871|PRAME family member 7##NM_001012276|PRAMEF8|391002|PRAME family member 8##AK124292|PRAMEF9|343070|PRAME family member 9##NM_001010890|PRAMEF9|343070|PRAME family member 9##NM_001098376|PRAMEF15|653619|PRAME family member 15##BC101343|PRAMEF9|343070|PRAME family member 9##BC137391|PRAMEF9|343070|PRAME family member 9##BC171794|PRAMEF9|343070|PRAME family member 9##NM_001024661|PRAMEF13|400736|PRAME family member 13##NM_001099854|PRAMEF14|729528|PRAME family member 14	0.84966	CTCF.p2:-9:0.850
chr14	71052014	71052139	reg1038606.p1	3.808	+	BC025378 NM_003814	-50345	-	NM_003813	-133203	+	AB527912 TSC_hg19_v1_chr14_-_70883770 BC007704 AK002133 AK311719 NM_001202547 NM_001202548 NM_001202549 NM_018373	-168320	-	AB463868 BT006831 CR541697 TSC_hg19_v1_chr14_-_71067367	15284	-	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	15301	-	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	56533	+	BC025378|ADAM20|8748|ADAM metallopeptidase domain 20##NM_003814|ADAM20|8748|ADAM metallopeptidase domain 20##NM_003813|ADAM21|8747|ADAM metallopeptidase domain 21##BC007704|SYNJ2BP|55333|synaptojanin 2 binding protein##AK002133|SYNJ2BP|55333|synaptojanin 2 binding protein##AK311719|SYNJ2BP|55333|synaptojanin 2 binding protein##NM_001202547|SYNJ2BP-COX16|100529257|SYNJ2BP-COX16 readthrough##NM_001202548|SYNJ2BP-COX16|100529257|SYNJ2BP-COX16 readthrough##NM_001202549|SYNJ2BP-COX16|100529257|SYNJ2BP-COX16 readthrough##NM_018373|SYNJ2BP|55333|synaptojanin 2 binding protein##BT006831|MED6|10001|mediator complex subunit 6##CR541697|MED6|10001|mediator complex subunit 6##AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9	0.925642	CTCF.p2:33:0.926
chr19	51339191	51339371	reg1037157.p1	3.808	+	AY373373 AY373374 CU686842 CU686864 HQ258133 BC126137 BC144045 BC144046 BC144047 AF303046 BC069480 BC069507 BC069518 NM_017509 NM_138563 NM_138564	-4519	-	BT007253 S77952 DQ893072 DQ896328 AY703451 BC005313 M25629 X13561 AK293363 AY429508 NM_002257	-12259	-	TSC_hg19_v1_chr19_-_51307892 NM_199250 NM_199249	-31362	-	AF335477 AF335478 AX772834 AX772836 BC005307 NM_001030047 NM_001030048 NM_001030050 NM_001648 S75755 U17040 X05332 BC056665 AJ310937 AJ459784 AJ310938 AK311887 AK312933 AJ459782 AJ459783 AJ512346 M26663 DQ890670 DQ893851 AB463810 CU690730 BT019862 M21895 M21896 M21897	18915	+	AK300527 AK309982 BC005196 NM_001002231 NM_005551 AK309985 AK300549 AK300566 AK309973 AY429509 AY429510 AF188745 AF188746 AF188747 S39329 CU675035 AB590372 DQ890672 DQ893853 AF336106 BT006650	37427	+	AF113140 AF259969 AY923170 BC069325 BC069403 BC069429 BC069489 BC096175 BC096176 BC096177 BC096178 CU686804 NM_004917	74712	-	AY373373|KLK15|55554|kallikrein-related peptidase 15##AY373374|KLK15|55554|kallikrein-related peptidase 15##HQ258133|KLK15|55554|kallikrein-related peptidase 15##BC126137|KLK15|55554|kallikrein-related peptidase 15##BC144045|KLK15|55554|kallikrein-related peptidase 15##BC144046|KLK15|55554|kallikrein-related peptidase 15##BC144047|KLK15|55554|kallikrein-related peptidase 15##AF303046|KLK15|55554|kallikrein-related peptidase 15##BC069480|KLK15|55554|kallikrein-related peptidase 15##BC069507|KLK15|55554|kallikrein-related peptidase 15##BC069518|KLK15|55554|kallikrein-related peptidase 15##NM_017509|KLK15|55554|kallikrein-related peptidase 15##NM_138563|KLK15|55554|kallikrein-related peptidase 15##NM_138564|KLK15|55554|kallikrein-related peptidase 15##BT007253|KLK1|3816|kallikrein 1##S77952|KLK1|3816|kallikrein 1##DQ893072|KLK1|3816|kallikrein 1##DQ896328|KLK1|3816|kallikrein 1##AY703451|KLK1|3816|kallikrein 1##BC005313|KLK1|3816|kallikrein 1##M25629|KLK1|3816|kallikrein 1##X13561|KLK1|3816|kallikrein 1##AY429508|KLK1|3816|kallikrein 1##NM_002257|KLK1|3816|kallikrein 1##NM_199250|C19orf48|84798|chromosome 19 open reading frame 48##NM_199249|C19orf48|84798|chromosome 19 open reading frame 48##AF335477|KLK3|354|kallikrein-related peptidase 3##AF335478|KLK3|354|kallikrein-related peptidase 3##AX772834|KLK3|354|kallikrein-related peptidase 3##BC005307|KLK3|354|kallikrein-related peptidase 3##NM_001030047|KLK3|354|kallikrein-related peptidase 3##NM_001030048|KLK3|354|kallikrein-related peptidase 3##NM_001030050|KLK3|354|kallikrein-related peptidase 3##NM_001648|KLK3|354|kallikrein-related peptidase 3##S75755|KLK3|354|kallikrein-related peptidase 3##U17040|KLK3|354|kallikrein-related peptidase 3##X05332|KLK3|354|kallikrein-related peptidase 3##BC056665|KLK3|354|kallikrein-related peptidase 3##AJ310937|KLK3|354|kallikrein-related peptidase 3##AJ459784|KLK3|354|kallikrein-related peptidase 3##AJ310938|KLK3|354|kallikrein-related peptidase 3##AK312933|KLK3|354|kallikrein-related peptidase 3##AJ459782|KLK3|354|kallikrein-related peptidase 3##AJ459783|KLK3|354|kallikrein-related peptidase 3##AJ512346|KLK3|354|kallikrein-related peptidase 3##M26663|KLK3|354|kallikrein-related peptidase 3##DQ890670|KLK3|354|kallikrein-related peptidase 3##DQ893851|KLK3|354|kallikrein-related peptidase 3##BT019862|KLK3|354|kallikrein-related peptidase 3##M21895|KLK3|354|kallikrein-related peptidase 3##M21896|KLK3|354|kallikrein-related peptidase 3##M21897|KLK3|354|kallikrein-related peptidase 3##AK300527|KLK2|3817|kallikrein-related peptidase 2##AK309982|KLK2|3817|kallikrein-related peptidase 2##BC005196|KLK2|3817|kallikrein-related peptidase 2##NM_001002231|KLK2|3817|kallikrein-related peptidase 2##NM_005551|KLK2|3817|kallikrein-related peptidase 2##AK309985|KLK2|3817|kallikrein-related peptidase 2##AK300549|KLK2|3817|kallikrein-related peptidase 2##AK300566|KLK2|3817|kallikrein-related peptidase 2##AK309973|KLK2|3817|kallikrein-related peptidase 2##AY429509|KLK2|3817|kallikrein-related peptidase 2##AY429510|KLK2|3817|kallikrein-related peptidase 2##AF188745|KLK2|3817|kallikrein-related peptidase 2##AF188746|KLK2|3817|kallikrein-related peptidase 2##AF188747|KLK2|3817|kallikrein-related peptidase 2##S39329|KLK2|3817|kallikrein-related peptidase 2##DQ890672|KLK2|3817|kallikrein-related peptidase 2##DQ893853|KLK2|3817|kallikrein-related peptidase 2##AF336106|KLK2|3817|kallikrein-related peptidase 2##BT006650|KLK2|3817|kallikrein-related peptidase 2##AF113140|KLK4|9622|kallikrein-related peptidase 4##AF259969|KLK4|9622|kallikrein-related peptidase 4##AY923170|KLK4|9622|kallikrein-related peptidase 4##BC069325|KLK4|9622|kallikrein-related peptidase 4##BC069403|KLK4|9622|kallikrein-related peptidase 4##BC069429|KLK4|9622|kallikrein-related peptidase 4##BC069489|KLK4|9622|kallikrein-related peptidase 4##BC096175|KLK4|9622|kallikrein-related peptidase 4##BC096176|KLK4|9622|kallikrein-related peptidase 4##BC096177|KLK4|9622|kallikrein-related peptidase 4##BC096178|KLK4|9622|kallikrein-related peptidase 4##NM_004917|KLK4|9622|kallikrein-related peptidase 4	0.024376	
chr2	28844110	28844237	reg1038151.p2	3.808	+	TSC_hg19_v1_chr2_+_28824770 BC042674	-19390	+	BC150633 NM_001170585 NM_153021 BC153864	-125212	+	TSC_hg19_v1_chr2_+_28616369 AK315415 X16706 AB528427 CU692714 DQ893428 DQ896743 CR542262	-227700	+	TSC_hg19_v1_chr2_+_28974719 AK303682 AK295957 AK316532 NM_206876 NM_002709 BX647970 AK312329 BX647295 X80910	130501	+	TSC_hg19_v1_chr2_+_28974924 BC002697 BC012045 AB464241 AM392772 BT019744 CR542263 CR542285	130736	+	BC093005 NM_001142634 NM_182756 BC047224	189534	+	BC042674|PLB1|151056|phospholipase B1##BC150633|PLB1|151056|phospholipase B1##NM_001170585|PLB1|151056|phospholipase B1##NM_153021|PLB1|151056|phospholipase B1##BC153864|PLB1|151056|phospholipase B1##AK315415|FOSL2|2355|FOS-like antigen 2##X16706|FOSL2|2355|FOS-like antigen 2##DQ893428|FOSL2|2355|FOS-like antigen 2##DQ896743|FOSL2|2355|FOS-like antigen 2##CR542262|FOSL2|2355|FOS-like antigen 2##AK303682|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK295957|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK316532|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_206876|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##NM_002709|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647970|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AK312329|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BX647295|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##X80910|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BC002697|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BC012045|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##AM392772|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BT019744|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##CR542263|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##CR542285|PPP1CB|5500|protein phosphatase 1, catalytic subunit, beta isozyme##BC093005|SPDYA|245711|speedy homolog A (Xenopus laevis)##NM_001142634|SPDYA|245711|speedy homolog A (Xenopus laevis)##NM_182756|SPDYA|245711|speedy homolog A (Xenopus laevis)##BC047224|SPDYA|245711|speedy homolog A (Xenopus laevis)	0.064141	
chr1	182413748	182413840	reg1034102.p1	3.807	+	AJ515384 NM_172000	-44044	-	TSC_hg19_v1_chr1_-_182361366 AK122784 NM_001033044 NM_002065	-52454	-	TSC_hg19_v1_chr1_-_182360928 AY947343 BC018992 BC011700 X59834 BC010037 BC011852 Y00387 BC051726 BX537384	-52859	-	NM_001137669 AK302768 BC142944 AL136902	5479	+	AK315231 BC090934 TSC_hg19_v1_chr1_-_182558392 CR627369 NM_021133	144589	-	CU675308 TSC_hg19_v1_chr1_+_182569465	155652	+	AJ515384|TEDDM1|127670|transmembrane epididymal protein 1##NM_172000|TEDDM1|127670|transmembrane epididymal protein 1##AK122784|GLUL|2752|glutamate-ammonia ligase##NM_001033044|GLUL|2752|glutamate-ammonia ligase##NM_002065|GLUL|2752|glutamate-ammonia ligase##AY947343|GLUL|2752|glutamate-ammonia ligase##BC018992|GLUL|2752|glutamate-ammonia ligase##BC011700|GLUL|2752|glutamate-ammonia ligase##X59834|GLUL|2752|glutamate-ammonia ligase##BC010037|GLUL|2752|glutamate-ammonia ligase##BC011852|GLUL|2752|glutamate-ammonia ligase##Y00387|GLUL|2752|glutamate-ammonia ligase##BC051726|GLUL|2752|glutamate-ammonia ligase##BX537384|GLUL|2752|glutamate-ammonia ligase##NM_001137669|RGSL1|353299|regulator of G-protein signaling like 1##AK302768|RGSL1|353299|regulator of G-protein signaling like 1##BC142944|RGSL1|353299|regulator of G-protein signaling like 1##AL136902|RGSL1|353299|regulator of G-protein signaling like 1##AK315231|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##BC090934|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##CR627369|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##NM_021133|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)	0.05983	
chr1	28439665	28439804	reg1036277.p1	3.807	+	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-24610	-	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-153216	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-178173	+	NM_000952 NM_001164723	63720	-	S52624 AK292053 NM_001164721 NM_001164722	80678	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	119797	-	BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8	0.87394	CTCF.p2:9:0.874
chr15	74677455	74677546	reg1036881.p1	3.807	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-17497	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-18965	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-66595	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	48529	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	48812	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	75947	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.0	
chr17	37550108	37550223	reg1036028.p1	3.807	+	BC109231 AJ608762 AK131500 NM_198993	-168186	-	TSC_hg19_v1_chr17_+_37356579 BC000530 S56985 BC013016	-193584	+	TSC_hg19_v1_chr17_+_37356573 AK223082 BC062709 BX537435	-193593	+	TSC_hg19_v1_chr17_-_37557855 BC007557 DQ223959 AK312612 AK291844 AK123048 NM_001184906 NM_032875	7735	-	CU687400 BC131783 AF055994 BC006517 Y13467 BC060758 TSC_hg19_v1_chr17_-_37607519 AK299789 AK314185 NM_004774	57256	-	TSC_hg19_v1_chr17_+_37617760 NM_015083 NM_016507 AK302645	67587	+	BC109231|STAC2|342667|SH3 and cysteine rich domain 2##AJ608762|STAC2|342667|SH3 and cysteine rich domain 2##AK131500|STAC2|342667|SH3 and cysteine rich domain 2##NM_198993|STAC2|342667|SH3 and cysteine rich domain 2##BC000530|RPL19|6143|ribosomal protein L19##S56985|RPL19|6143|ribosomal protein L19##BC013016|RPL19|6143|ribosomal protein L19##AK223082|RPL19|6143|ribosomal protein L19##BC062709|RPL19|6143|ribosomal protein L19##BX537435|RPL19|6143|ribosomal protein L19##BC007557|FBXL20|84961|F-box and leucine-rich repeat protein 20##DQ223959|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK312612|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK291844|FBXL20|84961|F-box and leucine-rich repeat protein 20##AK123048|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_001184906|FBXL20|84961|F-box and leucine-rich repeat protein 20##NM_032875|FBXL20|84961|F-box and leucine-rich repeat protein 20##BC131783|MED1|5469|mediator complex subunit 1##AF055994|MED1|5469|mediator complex subunit 1##BC006517|MED1|5469|mediator complex subunit 1##Y13467|MED1|5469|mediator complex subunit 1##BC060758|MED1|5469|mediator complex subunit 1##AK299789|MED1|5469|mediator complex subunit 1##AK314185|MED1|5469|mediator complex subunit 1##NM_004774|MED1|5469|mediator complex subunit 1##NM_015083|CDK12|51755|cyclin-dependent kinase 12##NM_016507|CDK12|51755|cyclin-dependent kinase 12##AK302645|CDK12|51755|cyclin-dependent kinase 12	0.084063	
chr17	57409906	57410012	reg1035275.p1	3.807	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	-941	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	-112061	+	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	-122562	+	AF461690 NM_001166301 NM_024612 TSC_hg19_v1_chr17_+_57642970 BC024187 AK299151 AK095681 AF260270 AK226048 AB384723 DQ890909 DQ894060	233028	+	TSC_hg19_v1_chr17_+_57697037 NM_004859	287086	+	TSC_hg19_v1_chr17_+_57697265 BC054489 BX640615	287311	+	NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)##NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_004859|CLTC|1213|clathrin, heavy chain (Hc)##BC054489|CLTC|1213|clathrin, heavy chain (Hc)##BX640615|CLTC|1213|clathrin, heavy chain (Hc)	0.023297	
chr1	90099661	90099818	reg1016289.p4	3.807	+	TSC_hg19_v1_chr1_+_90098707 AK127881 AB081509 BC103929 BC113973	-975	+	NM_032270 TSC_hg19_v1_chr1_+_90098643	-1094	+	TSC_hg19_v1_chr1_+_90098630 BC036122	-1106	+	TSC_hg19_v1_chr1_+_90286586 NM_001134479	186788	+	TSC_hg19_v1_chr1_+_90286603 AK092238 AX747423	186860	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	187719	+	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C##AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_001134479|LRRC8D|55144|leucine rich repeat containing 8 family, member D##AK092238|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D	0.0	
chr19	16699348	16699458	reg1034351.p1	3.807	+	TSC_hg19_v1_chr19_+_16683381 AK094229	-16006	+	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	-16207	-	TSC_hg19_v1_chr19_-_16653256 NM_006387	-46140	-	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	39597	-	TSC_hg19_v1_chr19_-_16770944 AK025602 BC069279 BX648276	71526	-	TSC_hg19_v1_chr19_-_16770956 NM_024104	71559	-	BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##NM_006387|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26##AK025602|C19orf42|79086|chromosome 19 open reading frame 42##BC069279|C19orf42|79086|chromosome 19 open reading frame 42##BX648276|C19orf42|79086|chromosome 19 open reading frame 42##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42	0.024101	
chr19	35704799	35704946	reg1039820.p1	3.807	+	BC009642 TSC_hg19_v1_chr19_+_35646116	-58789	+	TSC_hg19_v1_chr19_+_35645641 AB072911 BC013834 NM_144779 AY358991 BC018798 AF161462 NM_001164605	-59130	+	TSC_hg19_v1_chr19_+_35645637 NM_014164 AK304012	-59246	+	BC039080 HQ258231 AK098526 NM_152481 BC117457 BC117459	14732	-	TSC_hg19_v1_chr19_+_35739294 AK126834	34419	+	TSC_hg19_v1_chr19_+_35739638 NM_015925 NM_205834 NM_205835 BC047376	34742	+	BC009642|FXYD5|53827|FXYD domain containing ion transport regulator 5##AB072911|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC013834|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_144779|FXYD5|53827|FXYD domain containing ion transport regulator 5##AY358991|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC018798|FXYD5|53827|FXYD domain containing ion transport regulator 5##AF161462|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_001164605|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_014164|FXYD5|53827|FXYD domain containing ion transport regulator 5##AK304012|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC039080|FAM187B|148109|family with sequence similarity 187, member B##HQ258231|FAM187B|148109|family with sequence similarity 187, member B##AK098526|FAM187B|148109|family with sequence similarity 187, member B##NM_152481|FAM187B|148109|family with sequence similarity 187, member B##BC117457|FAM187B|148109|family with sequence similarity 187, member B##BC117459|FAM187B|148109|family with sequence similarity 187, member B##AK126834|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_015925|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_205834|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_205835|LSR|51599|lipolysis stimulated lipoprotein receptor##BC047376|LSR|51599|lipolysis stimulated lipoprotein receptor	0.0	
chr2	12198106	12198173	reg1028592.p2	3.807	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-311364	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-387848	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-515296	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	659114	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	659777	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	660258	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.0	
chr21	45564951	45565090	reg1033159.p1	3.807	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-11459	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-11515	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-37721	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	95746	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	95837	-	AF194032 NM_013369 NM_175867	117078	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr5	162383732	162383844	reg1029029.p1	3.807	+	NM_000816 NM_198903 NM_198904 BC052926 BC036030 X15376 BC059389 BC069348 BC074795 AK315200 AK299640	-888943	+	NM_001127648 AB590312 DQ890915	-1106029	+	NM_001127647	-1106397	+	TSC_hg19_v1_chr5_+_162864606 AK316234 NM_004060 NM_199246 AK297190 AK312913 BC007093 BX538035 D78341 L49504 BC000196	480833	+	AB528197 AM392736 AM393438 FJ215684 AK094647 TSC_hg19_v1_chr5_-_162887097	503290	-	AK311957 TSC_hg19_v1_chr5_-_162887119 BC017934 BX538290 NM_145266	503345	-	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127647|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK316234|CCNG1|900|cyclin G1##NM_004060|CCNG1|900|cyclin G1##NM_199246|CCNG1|900|cyclin G1##AK297190|CCNG1|900|cyclin G1##AK312913|CCNG1|900|cyclin G1##BC007093|CCNG1|900|cyclin G1##BX538035|CCNG1|900|cyclin G1##D78341|CCNG1|900|cyclin G1##L49504|CCNG1|900|cyclin G1##BC000196|CCNG1|900|cyclin G1##AM392736|NUDCD2|134492|NudC domain containing 2##AM393438|NUDCD2|134492|NudC domain containing 2##FJ215684|NUDCD2|134492|NudC domain containing 2##AK311957|NUDCD2|134492|NudC domain containing 2##BC017934|NUDCD2|134492|NudC domain containing 2##BX538290|NUDCD2|134492|NudC domain containing 2##NM_145266|NUDCD2|134492|NudC domain containing 2	0.913341	CTCF.p2:-13:0.913
chr6	16128239	16128372	reg1002696.p1	3.807	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-465015	-	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	-465128	-	TSC_hg19_v1_chr6_+_15249113 AK303610	-879192	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	997	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	1132	+	TSC_hg19_v1_chr6_+_16143281 AK026739	15005	+	NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein	0.0	
chr10	11563042	11563145	reg1037838.p1	3.806	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-355601	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-355647	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-355668	+	NM_001080491	11180	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	90543	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	221305	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.0	
chr10	26726983	26727100	reg1022863.p2	3.806	+	M74826 BC029517 M81882 TSC_hg19_v1_chr10_+_26505702 BC126327 BC126329 AB527954 HQ258311	-221376	+	NM_000818 NM_001134366	-221806	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	-503861	+	TSC_hg19_v1_chr10_+_26727269 NM_019043	230	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	276	+	TSC_hg19_v1_chr10_+_26727679 BC054516	627	+	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##HQ258311|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA##NM_019043|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	0.0	
chr11	121440789	121440969	reg1037718.p2	3.806	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-117704	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	-117930	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	-277325	+	TSC_hg19_v1_chr11_+_121461071 AK294404	20219	+	BC130361 BC130363 AF303179 NM_001001786	545982	-	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	1085668	+	AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B	0.0	
chr11	64122831	64122916	reg1003335.p2	3.806	+	TSC_hg19_v1_chr11_+_64120348 AK126728	-2514	+	TSC_hg19_v1_chr11_+_64107692 BC151218 BC151222 NM_032251 AK090436 BC140822 BC140824 BC141866	-15171	+	TSC_hg19_v1_chr11_+_64085676 AF124993 AF110731 BC113723 BC113725 BC143849 BC171733 AF112212 AF242525 AF231705 CR457203 HQ258129 AJ249483	-37151	+	TSC_hg19_v1_chr11_+_64126642 AK223561 NM_001006944 NM_003942 AJ010119 AK292163 AK313567 BC047896 AK298507 BC028079 CU690526 AF074715	3858	+	AK290791 BC034384 NM_018484 AK129930	200252	+	AB050269 NM_144585 NM_153378	235408	+	AK126728|CCDC88B|283234|coiled-coil domain containing 88B##BC151218|CCDC88B|283234|coiled-coil domain containing 88B##BC151222|CCDC88B|283234|coiled-coil domain containing 88B##NM_032251|CCDC88B|283234|coiled-coil domain containing 88B##AK090436|CCDC88B|283234|coiled-coil domain containing 88B##BC140822|CCDC88B|283234|coiled-coil domain containing 88B##BC140824|CCDC88B|283234|coiled-coil domain containing 88B##BC141866|CCDC88B|283234|coiled-coil domain containing 88B##AF124993|PRDX5|25824|peroxiredoxin 5##AF110731|PRDX5|25824|peroxiredoxin 5##BC113723|PRDX5|25824|peroxiredoxin 5##BC113725|PRDX5|25824|peroxiredoxin 5##BC143849|PRDX5|25824|peroxiredoxin 5##BC171733|PRDX5|25824|peroxiredoxin 5##AF112212|PRDX5|25824|peroxiredoxin 5##AF242525|PRDX5|25824|peroxiredoxin 5##AF231705|PRDX5|25824|peroxiredoxin 5##CR457203|PRDX5|25824|peroxiredoxin 5##HQ258129|PRDX5|25824|peroxiredoxin 5##AJ249483|PRDX5|25824|peroxiredoxin 5##AK223561|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_001006944|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_003942|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AJ010119|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK292163|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK313567|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC047896|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK298507|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC028079|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AF074715|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK290791|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##BC034384|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##NM_018484|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AK129930|SLC22A11|55867|solute carrier family 22 (organic anion/urate transporter), member 11##AB050269|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_144585|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12##NM_153378|SLC22A12|116085|solute carrier family 22 (organic anion/urate transporter), member 12	0.095774	
chr11	66176215	66176395	reg1000303.p2	3.806	+	AF029358 BC093634 BC143335 X86681 TSC_hg19_v1_chr11_-_66139222 AF034102 AF401235 NM_001532	-37128	-	CU692428 DQ892706 DQ895957 AK075354 AK098779 AK225182 TSC_hg19_v1_chr11_-_66115101 AK294604 BC021965 AK293715 AF029893 AK098389 NM_006876	-61214	-	BC009834 TSC_hg19_v1_chr11_-_66112576 AF159141 AK310991 NM_001024957 NM_015399	-63745	-	AK096253 NM_178864 TSC_hg19_v1_chr11_+_66188505 AB049469 BC105001 BC105003 BC143630 EU446888	12256	+	TSC_hg19_v1_chr11_-_66206308 BC108277 AB049638 AK290084 AK223112 BC005002 AF151871 NM_016050 NM_170738 NM_170739	29981	-	AK094060 AX748433 NM_001243135	57492	+	AF029358|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC093634|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##BC143335|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##X86681|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF034102|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##AF401235|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##NM_001532|SLC29A2|3177|solute carrier family 29 (nucleoside transporters), member 2##DQ892706|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##DQ895957|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK075354|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098779|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK225182|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK294604|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##BC021965|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK293715|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AF029893|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##AK098389|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##NM_006876|B3GNT1|11041|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1##BC009834|BRMS1|25855|breast cancer metastasis suppressor 1##AF159141|BRMS1|25855|breast cancer metastasis suppressor 1##AK310991|BRMS1|25855|breast cancer metastasis suppressor 1##NM_001024957|BRMS1|25855|breast cancer metastasis suppressor 1##NM_015399|BRMS1|25855|breast cancer metastasis suppressor 1##AK096253|NPAS4|266743|neuronal PAS domain protein 4##NM_178864|NPAS4|266743|neuronal PAS domain protein 4##AB049469|NPAS4|266743|neuronal PAS domain protein 4##BC105001|NPAS4|266743|neuronal PAS domain protein 4##BC105003|NPAS4|266743|neuronal PAS domain protein 4##BC143630|NPAS4|266743|neuronal PAS domain protein 4##EU446888|NPAS4|266743|neuronal PAS domain protein 4##BC108277|MRPL11|65003|mitochondrial ribosomal protein L11##AB049638|MRPL11|65003|mitochondrial ribosomal protein L11##AK290084|MRPL11|65003|mitochondrial ribosomal protein L11##AK223112|MRPL11|65003|mitochondrial ribosomal protein L11##BC005002|MRPL11|65003|mitochondrial ribosomal protein L11##AF151871|MRPL11|65003|mitochondrial ribosomal protein L11##NM_016050|MRPL11|65003|mitochondrial ribosomal protein L11##NM_170738|MRPL11|65003|mitochondrial ribosomal protein L11##NM_170739|MRPL11|65003|mitochondrial ribosomal protein L11##AK094060|PELI3|246330|pellino homolog 3 (Drosophila)##NM_001243135|PELI3|246330|pellino homolog 3 (Drosophila)	0.0	
chr12	120561553	120561641	reg1028689.p1	3.806	+	TSC_hg19_v1_chr12_+_120554697 BC041995 AK130486	-6888	+	TSC_hg19_v1_chr12_-_120554632 NM_001167606 NM_006861	-6958	-	TSC_hg19_v1_chr12_-_120554558 AK300127	-7032	-	TSC_hg19_v1_chr12_-_120632504 AB587307 AK297271 BC153881 D86973 NM_006836	70891	-	BC019014 BC000087 TSC_hg19_v1_chr12_-_120638906 BC070194	77304	-	AK129754 AK222571 AK304674 BC107717 D28418 TSC_hg19_v1_chr12_-_120638911 AK222468 AK291109	77313	-	NM_001167606|RAB35|11021|RAB35, member RAS oncogene family##NM_006861|RAB35|11021|RAB35, member RAS oncogene family##AK300127|RAB35|11021|RAB35, member RAS oncogene family##AK297271|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##BC153881|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##D86973|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##NM_006836|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##BC019014|RPLP0|6175|ribosomal protein, large, P0##BC000087|RPLP0|6175|ribosomal protein, large, P0##BC070194|RPLP0|6175|ribosomal protein, large, P0##AK129754|RPLP0|6175|ribosomal protein, large, P0##AK222571|RPLP0|6175|ribosomal protein, large, P0##AK304674|RPLP0|6175|ribosomal protein, large, P0##BC107717|RPLP0|6175|ribosomal protein, large, P0##D28418|RPLP0|6175|ribosomal protein, large, P0##AK222468|RPLP0|6175|ribosomal protein, large, P0##AK291109|RPLP0|6175|ribosomal protein, large, P0	0.0	
chr17	40313883	40313952	reg1033296.p2	3.806	+	TSC_hg19_v1_chr17_-_40307015 BC114439 BC106039 NM_001252039 NM_004583 NM_201434	-6879	-	TSC_hg19_v1_chr17_-_40307008 AK310234	-6919	-	TSC_hg19_v1_chr17_-_40306986 U18420	-6956	-	TSC_hg19_v1_chr17_-_40333301 AB022698 NM_012285	19358	-	AB463761 AF041240 NM_001524	23509	-	AK298933 TSC_hg19_v1_chr17_-_40346487 BC022784 AK122777 AK123075 AK307058 BC011056 AK075277 NM_001142622 NM_001142623 NM_032484	32571	-	BC114439|RAB5C|5878|RAB5C, member RAS oncogene family##BC106039|RAB5C|5878|RAB5C, member RAS oncogene family##NM_001252039|RAB5C|5878|RAB5C, member RAS oncogene family##NM_004583|RAB5C|5878|RAB5C, member RAS oncogene family##NM_201434|RAB5C|5878|RAB5C, member RAS oncogene family##AK310234|RAB5C|5878|RAB5C, member RAS oncogene family##U18420|RAB5C|5878|RAB5C, member RAS oncogene family##AB022698|KCNH4|23415|potassium voltage-gated channel, subfamily H (eag-related), member 4##NM_012285|KCNH4|23415|potassium voltage-gated channel, subfamily H (eag-related), member 4##AF041240|HCRT|3060|hypocretin (orexin) neuropeptide precursor##NM_001524|HCRT|3060|hypocretin (orexin) neuropeptide precursor##AK298933|GHDC|84514|GH3 domain containing##BC022784|GHDC|84514|GH3 domain containing##AK122777|GHDC|84514|GH3 domain containing##AK123075|GHDC|84514|GH3 domain containing##AK307058|GHDC|84514|GH3 domain containing##BC011056|GHDC|84514|GH3 domain containing##AK075277|GHDC|84514|GH3 domain containing##NM_001142622|GHDC|84514|GH3 domain containing##NM_001142623|GHDC|84514|GH3 domain containing##NM_032484|GHDC|84514|GH3 domain containing	0.0	
chr17	45363779	45363959	reg1028835.p1	3.806	+	TSC_hg19_v1_chr17_+_45331260 AK300424	-32611	+	AY826979 TSC_hg19_v1_chr17_+_45331224 AB587392 U95204	-32645	+	TSC_hg19_v1_chr17_+_45331192 BC127666 BC127667 J02703 NM_000212 M35999 M20311	-32685	+	BC044604 TSC_hg19_v1_chr17_+_45401141	37272	+	TSC_hg19_v1_chr17_+_45401357 NM_001195192 NM_152347 BC036407 BC037876	37463	+	TSC_hg19_v1_chr17_-_45569837 BC090855 BC067758	205975	-	AY826979|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##U95204|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127666|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127667|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##J02703|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##NM_000212|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M35999|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M20311|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC044604|C17orf57|124989|chromosome 17 open reading frame 57##NM_001195192|C17orf57|124989|chromosome 17 open reading frame 57##NM_152347|C17orf57|124989|chromosome 17 open reading frame 57##BC036407|C17orf57|124989|chromosome 17 open reading frame 57##BC037876|C17orf57|124989|chromosome 17 open reading frame 57##BC090855|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2##BC067758|MRPL45P2|653479|mitochondrial ribosomal protein L45 pseudogene 2	0.0	
chr19	11399152	11399263	reg1039751.p1	3.806	+	AB384597 TSC_hg19_v1_chr19_-_11373144 AB037816 BC146786 BC095483 NM_020812	-26069	-	TSC_hg19_v1_chr19_+_11350294 NM_018687 AY358356	-48911	+	TSC_hg19_v1_chr19_-_11308465 AK000011 AK225038	-90745	-	AF133424 NM_012466 BC029908	7626	+	AF081353 TSC_hg19_v1_chr19_-_11450305 BC016471 AK313538 NM_004283	51093	-	BC008365 BC091472 AY358949 TSC_hg19_v1_chr19_-_11456946 AK291979 NM_001145416 NM_033408 NM_198536	57726	-	AB037816|DOCK6|57572|dedicator of cytokinesis 6##BC146786|DOCK6|57572|dedicator of cytokinesis 6##BC095483|DOCK6|57572|dedicator of cytokinesis 6##NM_020812|DOCK6|57572|dedicator of cytokinesis 6##NM_018687|C19orf80|55908|chromosome 19 open reading frame 80##AY358356|C19orf80|55908|chromosome 19 open reading frame 80##AK000011|KANK2|25959|KN motif and ankyrin repeat domains 2##AK225038|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_012466|TSPAN16|26526|tetraspanin 16##BC029908|TSPAN16|26526|tetraspanin 16##AF081353|RAB3D|9545|RAB3D, member RAS oncogene family##BC016471|RAB3D|9545|RAB3D, member RAS oncogene family##AK313538|RAB3D|9545|RAB3D, member RAS oncogene family##NM_004283|RAB3D|9545|RAB3D, member RAS oncogene family##BC008365|TMEM205|374882|transmembrane protein 205##BC091472|TMEM205|374882|transmembrane protein 205##AY358949|TMEM205|374882|transmembrane protein 205##AK291979|TMEM205|374882|transmembrane protein 205##NM_001145416|TMEM205|374882|transmembrane protein 205##NM_033408|TMEM205|374882|transmembrane protein 205##NM_198536|TMEM205|374882|transmembrane protein 205	0.0	
chr5	126112339	126112519	reg1037433.p1	3.806	+	NM_005573 BC052951	-114	+	BC130495 BC130497 AK131015 NM_207408 HQ258080	-145014	+	AK023255 NM_032177 TSC_hg19_v1_chr5_+_125936641 BC021161 AK024065 AK298497 AK225464 CR457305 DQ893213 DQ896542	-175797	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	402	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	453	+	TSC_hg19_v1_chr5_+_126113050 AB527547 DQ891592 EU176582 CU680274	695	+	NM_005573|LMNB1|4001|lamin B1##BC052951|LMNB1|4001|lamin B1##BC130495|C5orf48|389320|chromosome 5 open reading frame 48##BC130497|C5orf48|389320|chromosome 5 open reading frame 48##AK131015|C5orf48|389320|chromosome 5 open reading frame 48##NM_207408|C5orf48|389320|chromosome 5 open reading frame 48##HQ258080|C5orf48|389320|chromosome 5 open reading frame 48##AK023255|PHAX|51808|phosphorylated adaptor for RNA export##NM_032177|PHAX|51808|phosphorylated adaptor for RNA export##BC021161|PHAX|51808|phosphorylated adaptor for RNA export##AK024065|PHAX|51808|phosphorylated adaptor for RNA export##AK298497|PHAX|51808|phosphorylated adaptor for RNA export##AK225464|PHAX|51808|phosphorylated adaptor for RNA export##CR457305|PHAX|51808|phosphorylated adaptor for RNA export##DQ893213|PHAX|51808|phosphorylated adaptor for RNA export##DQ896542|PHAX|51808|phosphorylated adaptor for RNA export##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1##AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1##DQ891592|LMNB1|4001|lamin B1##EU176582|LMNB1|4001|lamin B1	0.0	
chr5	79552344	79552433	reg1027223.p2	3.806	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	-503	-	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-221224	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-265430	-	NM_032567 AK098575 AK314007 AF333098 BC033798	63427	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	151465	+	AY358256 NM_205548 BC142990 TSC_hg19_v1_chr5_+_79783828 BC131563	231445	+	BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AY358256|FAM151B|167555|family with sequence similarity 151, member B##NM_205548|FAM151B|167555|family with sequence similarity 151, member B##BC142990|FAM151B|167555|family with sequence similarity 151, member B##BC131563|FAM151B|167555|family with sequence similarity 151, member B	0.0	
chr7	21466568	21466707	reg1027895.p2	3.806	+	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	-640103	-	TSC_hg19_v1_chr7_-_20826429 AK299947	-640209	-	TSC_hg19_v1_chr7_-_20825382 AB464710	-641255	-	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	1182	+	AB591008 TSC_hg19_v1_chr7_+_21468356	1687	+	AJ320497 NM_003777	116195	+	AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor##AK299947|SP8|221833|Sp8 transcription factor##AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11	0.0	
chr10	44461161	44461278	reg1032927.p2	3.805	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-316913	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-317014	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-359322	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	419280	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	945499	+	AK056518 TSC_hg19_v1_chr10_-_45455156	993928	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.0	
chr10	75717206	75717330	reg1024671.p1	3.805	+	BC049374 NM_001001791	-34734	-	AB208961 TSC_hg19_v1_chr10_+_75673428	-43881	+	BC013575 K03226 M15476 D00244 TSC_hg19_v1_chr10_+_75670948 X02760	-46327	+	TSC_hg19_v1_chr10_+_75757873 AK304823 NM_003373 NM_014000 AK300280 AK296509 BC099919 BC039174 M33308 AB385172 DQ894680	40638	+	TSC_hg19_v1_chr10_-_75910513 BC067127	193244	-	TSC_hg19_v1_chr10_-_75910561 AK315597 AK026983 AK299352 BC026232 NM_012095 NM_207012	193420	-	BC049374|C10orf55|414236|chromosome 10 open reading frame 55##NM_001001791|C10orf55|414236|chromosome 10 open reading frame 55##AB208961|PLAU|5328|plasminogen activator, urokinase##BC013575|PLAU|5328|plasminogen activator, urokinase##K03226|PLAU|5328|plasminogen activator, urokinase##M15476|PLAU|5328|plasminogen activator, urokinase##D00244|PLAU|5328|plasminogen activator, urokinase##X02760|PLAU|5328|plasminogen activator, urokinase##AK304823|VCL|7414|vinculin##NM_003373|VCL|7414|vinculin##NM_014000|VCL|7414|vinculin##AK300280|VCL|7414|vinculin##AK296509|VCL|7414|vinculin##BC039174|VCL|7414|vinculin##M33308|VCL|7414|vinculin##DQ894680|VCL|7414|vinculin##BC067127|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK315597|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK026983|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK299352|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##BC026232|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_012095|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_207012|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit	0.813355	CTCF.p2:48:0.813
chr1	199010677	199010858	reg1033745.p1	3.805	+	TSC_hg19_v1_chr1_-_198906559 EF413001	-104220	-	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-402437	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-402542	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	986102	+	AK316513 TSC_hg19_v1_chr1_+_200011716	1000957	+	NM_001105517	1171888	+	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene	0.0	
chr12	49524110	49524279	reg1030824.p1	3.805	+	AY358572 AF260728 TSC_hg19_v1_chr12_-_49504681 AK310064 AK310674 NM_018113	-19530	-	BC008337 TSC_hg19_v1_chr12_-_49504631 AK001651 AK298026	-19571	-	CU677167 CU678919 CU689172 DQ892407 DQ895619 TSC_hg19_v1_chr12_-_49504467 BC015015 BC031550 AB033000 AK001356	-19769	-	TSC_hg19_v1_chr12_+_49524671 BC037205	525	+	BC015883 TSC_hg19_v1_chr12_-_49525141 BC017004 BC008659 K00558	944	-	BC001128 BC009512 BC009314 BC006379 BC006481 BC010494 BC011572 BC018948 BC021564 BC009509 BC009513 DQ400107 BC000696 BC071904 TSC_hg19_v1_chr12_-_49525179 BC030820 AK026516 AK026632 AK057773 AK094717 AK098357 AK098635 AK098771 AK289354	977	-	AY358572|LMBR1L|55716|limb region 1 homolog (mouse)-like##AF260728|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK310064|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK310674|LMBR1L|55716|limb region 1 homolog (mouse)-like##NM_018113|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC008337|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK001651|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK298026|LMBR1L|55716|limb region 1 homolog (mouse)-like##DQ892407|LMBR1L|55716|limb region 1 homolog (mouse)-like##DQ895619|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC015015|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC031550|LMBR1L|55716|limb region 1 homolog (mouse)-like##AB033000|LMBR1L|55716|limb region 1 homolog (mouse)-like##AK001356|LMBR1L|55716|limb region 1 homolog (mouse)-like##BC015883|TUBA1B|10376|tubulin, alpha 1b##BC017004|TUBA1B|10376|tubulin, alpha 1b##BC008659|TUBA1B|10376|tubulin, alpha 1b##K00558|TUBA1B|10376|tubulin, alpha 1b##BC001128|TUBA1B|10376|tubulin, alpha 1b##BC009512|TUBA1B|10376|tubulin, alpha 1b##BC009314|TUBA1B|10376|tubulin, alpha 1b##BC006379|TUBA1B|10376|tubulin, alpha 1b##BC006481|TUBA1B|10376|tubulin, alpha 1b##BC010494|TUBA1B|10376|tubulin, alpha 1b##BC011572|TUBA1B|10376|tubulin, alpha 1b##BC018948|TUBA1B|10376|tubulin, alpha 1b##BC021564|TUBA1B|10376|tubulin, alpha 1b##BC009509|TUBA1B|10376|tubulin, alpha 1b##BC009513|TUBA1B|10376|tubulin, alpha 1b##DQ400107|TUBA1B|10376|tubulin, alpha 1b##BC000696|TUBA1B|10376|tubulin, alpha 1b##BC071904|TUBA1B|10376|tubulin, alpha 1b##BC030820|TUBA1B|10376|tubulin, alpha 1b##AK026516|TUBA1B|10376|tubulin, alpha 1b##AK026632|TUBA1B|10376|tubulin, alpha 1b##AK057773|TUBA1B|10376|tubulin, alpha 1b##AK094717|TUBA1B|10376|tubulin, alpha 1b##AK098357|TUBA1B|10376|tubulin, alpha 1b##AK098635|TUBA1B|10376|tubulin, alpha 1b##AK098771|TUBA1B|10376|tubulin, alpha 1b##AK289354|TUBA1B|10376|tubulin, alpha 1b	0.335667	CTCF.p2:-16:0.336
chr18	57567213	57567306	reg1027847.p2	3.805	+	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-30	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-202609	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	-202668	-	AK314130 NM_005912	472741	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1590515	+	AK096495 NM_173557	1993044	-	NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152	0.0	
chr19	2581399	2581509	reg1028698.p2	3.805	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-105216	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-124494	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-124518	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	121241	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	121288	-	AK124445 TSC_hg19_v1_chr19_-_2717420	135895	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.733075	CTCF.p2:-43:0.733
chr2	109228692	109228865	reg1041569.p1	3.805	+	TSC_hg19_v1_chr2_+_109223602 AF527762 NM_001193482	-5161	+	TSC_hg19_v1_chr2_+_109204921 BC005341 NM_001193488	-23809	+	TSC_hg19_v1_chr2_+_109204792 AF527763	-23993	+	TSC_hg19_v1_chr2_+_109237706 AK304260 NM_001193484 AF527760 AK310547	8925	+	AF527759 NM_001193485	42489	+	TSC_hg19_v1_chr2_+_109271492 AK302411 AK312178	42710	+	AF527762|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193482|LIMS1|3987|LIM and senescent cell antigen-like domains 1##BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK304260|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193484|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527760|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK310547|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3	0.0	
chr2	96810011	96810107	reg1032002.p2	3.805	+	BC107126 AJ537600 BC107127 NM_001002036	-5886	-	NM_000682 AB527942 BC133021 BC136537	-28124	-	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	-109365	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	895	-	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	1100	-	AK054615 CU680552 AK291190 TSC_hg19_v1_chr2_-_96874010 AB527627	63996	-	BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2##AK054615|STARD7|56910|StAR-related lipid transfer (START) domain containing 7##AK291190|STARD7|56910|StAR-related lipid transfer (START) domain containing 7	0.0	
chr3	10785876	10785994	reg1034611.p1	3.805	+	L20977 TSC_hg19_v1_chr3_-_10749723	-36213	-	AB210008 TSC_hg19_v1_chr3_-_10547352	-238589	-	AK308898 NM_001001331 NM_001683 TSC_hg19_v1_chr3_-_10547271	-238666	-	TSC_hg19_v1_chr3_+_10857912 AK312719 BC036083 NM_014229 S75989 AB527355	71972	+	NM_003042 TSC_hg19_v1_chr3_+_11034421	248486	+	TSC_hg19_v1_chr3_+_11034439 BC057291 BC033904	248527	+	L20977|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC057291|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC033904|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1	0.020801	
chr4	141247701	141247798	reg1037572.p1	3.805	+	AK027797 NM_032547	-69310	+	NM_018717 TSC_hg19_v1_chr4_-_141075339	-172417	-	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	-173411	-	NM_001153446 NM_001153635 BC062684 NM_001153585 NM_001153690	16856	+	NM_001153484 NM_001153552 NM_001153663 TSC_hg19_v1_chr4_+_141294715	46947	+	TSC_hg19_v1_chr4_+_141294799 AF330205 AF448857 AB015335	47019	+	AK027797|SCOC|60592|short coiled-coil protein##NM_032547|SCOC|60592|short coiled-coil protein##NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)##NM_001153446|SCOC|60592|short coiled-coil protein##NM_001153635|SCOC|60592|short coiled-coil protein##BC062684|SCOC|60592|short coiled-coil protein##NM_001153585|SCOC|60592|short coiled-coil protein##NM_001153690|SCOC|60592|short coiled-coil protein##NM_001153484|SCOC|60592|short coiled-coil protein##NM_001153552|SCOC|60592|short coiled-coil protein##NM_001153663|SCOC|60592|short coiled-coil protein##AF330205|SCOC|60592|short coiled-coil protein##AF448857|SCOC|60592|short coiled-coil protein##AB015335|SCOC|60592|short coiled-coil protein	0.057901	
chr5	142473446	142473576	reg1027453.p1	3.805	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-323203	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-323539	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-395940	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	309312	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	309595	-	BC015610 TSC_hg19_v1_chr5_-_142783214	309700	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr6	159290305	159290414	reg1032755.p1	3.805	+	TSC_hg19_v1_chr6_-_159240446 NM_001111077	-49903	-	TSC_hg19_v1_chr6_-_159240401 AK296738	-49946	-	AK312597 TSC_hg19_v1_chr6_-_159240398	-49961	-	NM_001195032	19259	+	TSC_hg19_v1_chr6_-_159420766 BC035675	130410	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	130460	-	NM_001111077|EZR|7430|ezrin##AK296738|EZR|7430|ezrin##AK312597|EZR|7430|ezrin##NM_001195032|C6orf99|100130967|chromosome 6 open reading frame 99##BC035675|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)	0.0	
chr8	145081979	145082075	reg1038438.p1	3.805	+	AL157442 TSC_hg19_v1_chr8_+_145066892	-15138	+	BC065834 TSC_hg19_v1_chr8_+_145065369 BC084553	-16655	+	TSC_hg19_v1_chr8_+_145064583 AK127640	-17414	+	TSC_hg19_v1_chr8_+_145086446 NM_001134374 NM_198572 BC050390 AB092352 AK301710 BC053547	4498	+	TSC_hg19_v1_chr8_-_145115617 BC150206 NM_017570 BC142672	33581	-	TSC_hg19_v1_chr8_+_145133523 NM_019037 AF281133	51483	+	AL157442|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)##BC065834|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)##BC084553|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)##AK127640|GRINA|2907|glutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1 (glutamate binding)##NM_001134374|SPATC1|375686|spermatogenesis and centriole associated 1##NM_198572|SPATC1|375686|spermatogenesis and centriole associated 1##BC050390|SPATC1|375686|spermatogenesis and centriole associated 1##AB092352|SPATC1|375686|spermatogenesis and centriole associated 1##AK301710|SPATC1|375686|spermatogenesis and centriole associated 1##BC053547|SPATC1|375686|spermatogenesis and centriole associated 1##BC150206|OPLAH|26873|5-oxoprolinase (ATP-hydrolysing)##NM_017570|OPLAH|26873|5-oxoprolinase (ATP-hydrolysing)##BC142672|OPLAH|26873|5-oxoprolinase (ATP-hydrolysing)##NM_019037|EXOSC4|54512|exosome component 4##AF281133|EXOSC4|54512|exosome component 4	0.021578	
chrX	153627225	153627366	reg1036368.p1	3.805	+	NM_006013 TSC_hg19_v1_chrX_+_153626717 AK026568 AK130582 D28410 M64241 AK307511 BC026276 BX647954 AK027197 BC095425 AF218023 BC003358 BC071918 S35960 M73791 AF486812 BC063422 AB528224 AM393337 CR456797 CR542069 DQ369703 DQ369704 DQ369705 DQ369706 DQ369707 DQ369708 DQ369709 DQ369710 DQ369711 DQ369712 DQ369713 DQ369714 DQ369715 DQ369716	-580	+	BC000738 TSC_hg19_v1_chrX_+_153607746 X82434 AB463603 CU674378 AM393723 BT007401 CR536536	-19512	+	NM_000117 TSC_hg19_v1_chrX_+_153607623	-19682	+	AY927624 BC001561 U06846 NM_006730 BC028092	10263	-	TSC_hg19_v1_chrX_+_153639881 NM_000116 NM_181311 NM_181312 NM_181313 X92762 BC005062 AK291848 BC011515 AY231461 AY231462 AY231463 AY231464 AY258036 AY258037 AY258038 AY258039 AM392997 AM393205 DQ884408	12729	+	X90393 L40823 NM_001009932 NM_001009933 NM_001009934 TSC_hg19_v1_chrX_-_153640439	13110	-	NM_006013|RPL10|6134|ribosomal protein L10##AK026568|RPL10|6134|ribosomal protein L10##AK130582|RPL10|6134|ribosomal protein L10##D28410|RPL10|6134|ribosomal protein L10##M64241|RPL10|6134|ribosomal protein L10##AK307511|RPL10|6134|ribosomal protein L10##BC026276|RPL10|6134|ribosomal protein L10##BX647954|RPL10|6134|ribosomal protein L10##AK027197|RPL10|6134|ribosomal protein L10##BC095425|RPL10|6134|ribosomal protein L10##AF218023|RPL10|6134|ribosomal protein L10##BC003358|RPL10|6134|ribosomal protein L10##BC071918|RPL10|6134|ribosomal protein L10##S35960|RPL10|6134|ribosomal protein L10##M73791|RPL10|6134|ribosomal protein L10##AF486812|RPL10|6134|ribosomal protein L10##AM393337|RPL10|6134|ribosomal protein L10##CR456797|RPL10|6134|ribosomal protein L10##CR542069|RPL10|6134|ribosomal protein L10##DQ369703|RPL10|6134|ribosomal protein L10##DQ369704|RPL10|6134|ribosomal protein L10##DQ369705|RPL10|6134|ribosomal protein L10##DQ369706|RPL10|6134|ribosomal protein L10##DQ369707|RPL10|6134|ribosomal protein L10##DQ369708|RPL10|6134|ribosomal protein L10##DQ369709|RPL10|6134|ribosomal protein L10##DQ369710|RPL10|6134|ribosomal protein L10##DQ369711|RPL10|6134|ribosomal protein L10##DQ369712|RPL10|6134|ribosomal protein L10##DQ369713|RPL10|6134|ribosomal protein L10##DQ369714|RPL10|6134|ribosomal protein L10##DQ369715|RPL10|6134|ribosomal protein L10##DQ369716|RPL10|6134|ribosomal protein L10##BC000738|EMD|2010|emerin##X82434|EMD|2010|emerin##AM393723|EMD|2010|emerin##BT007401|EMD|2010|emerin##CR536536|EMD|2010|emerin##NM_000117|EMD|2010|emerin##BC001561|DNASE1L1|1774|deoxyribonuclease I-like 1##U06846|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_006730|DNASE1L1|1774|deoxyribonuclease I-like 1##BC028092|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_000116|TAZ|6901|tafazzin##NM_181311|TAZ|6901|tafazzin##NM_181312|TAZ|6901|tafazzin##NM_181313|TAZ|6901|tafazzin##X92762|TAZ|6901|tafazzin##BC005062|TAZ|6901|tafazzin##AK291848|TAZ|6901|tafazzin##BC011515|TAZ|6901|tafazzin##AY231461|TAZ|6901|tafazzin##AY231462|TAZ|6901|tafazzin##AY231463|TAZ|6901|tafazzin##AY231464|TAZ|6901|tafazzin##AY258036|TAZ|6901|tafazzin##AY258037|TAZ|6901|tafazzin##AY258038|TAZ|6901|tafazzin##AY258039|TAZ|6901|tafazzin##AM392997|TAZ|6901|tafazzin##AM393205|TAZ|6901|tafazzin##DQ884408|TAZ|6901|tafazzin##X90393|DNASE1L1|1774|deoxyribonuclease I-like 1##L40823|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_001009932|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_001009933|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_001009934|DNASE1L1|1774|deoxyribonuclease I-like 1	0.916297	CTCF.p2:-27:0.916
chr12	113568708	113568791	reg1033469.p1	3.804	+	NM_004416 BC048216	-73059	+	TSC_hg19_v1_chr12_+_113416323 NM_001032731 NM_002535 NM_016817 BC010625 BC053870 BC023637 AK292906 BC069052 BC049215 AK292796 M87284 M87434 AB590925 CU690608	-152409	+	AF063613 TSC_hg19_v1_chr12_+_113376306	-192409	+	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	4663	-	AF086713 AB208935 AK294350 NM_001193520 NM_004658	5282	-	AK308987 NM_001144872	18855	+	NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)##BC048216|DTX1|1840|deltex homolog 1 (Drosophila)##NM_001032731|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_002535|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_016817|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC010625|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC053870|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC023637|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292906|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC069052|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC049215|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292796|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87284|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87434|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AF063613|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AF086713|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AB208935|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK294350|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193520|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_004658|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001144872|CCDC42B|387885|coiled-coil domain containing 42B	0.103143	
chr1	236109631	236109812	reg1015782.p1	3.804	+	NM_000081 U67615 TSC_hg19_v1_chr1_-_236030233	-79477	-	TSC_hg19_v1_chr1_-_236030193 BC020793	-79538	-	BC022485 NM_001098721 NM_004485	-295668	-	TSC_hg19_v1_chr1_-_236228375 AB209448 CU692272	118656	-	TSC_hg19_v1_chr1_-_236228393 BC045606 M30269	118704	-	TSC_hg19_v1_chr1_-_236228477 NM_002508	118757	-	NM_000081|LYST|1130|lysosomal trafficking regulator##U67615|LYST|1130|lysosomal trafficking regulator##BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##AB209448|NID1|4811|nidogen 1##BC045606|NID1|4811|nidogen 1##M30269|NID1|4811|nidogen 1##NM_002508|NID1|4811|nidogen 1	0.0	
chr1	59280996	59281176	reg1026450.p1	3.804	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-31351	-	TSC_hg19_v1_chr1_-_59248287 BC009874	-32721	-	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-115334	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	481526	+	NM_001244714 AK054842	494667	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	999566	+	BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##BC009874|JUN|3725|jun proto-oncogene##BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)	0.0	
chr1	62857170	62857282	reg1038857.p1	3.804	+	TSC_hg19_v1_chr1_-_62785084 AB284127 BC060866 NM_181712	-72147	-	AK091941 AX747268 TSC_hg19_v1_chr1_-_62785028	-72227	-	NM_001164835 NM_019079 BC012555 BC060808 AB211065 AL834314 AK001973 BC111559	-196710	+	NM_001017415 NM_001017416	44748	+	BC040140 BC018745 NM_003368	45127	+	TSC_hg19_v1_chr1_+_62902702 BC050525	45452	+	AB284127|KANK4|163782|KN motif and ankyrin repeat domains 4##BC060866|KANK4|163782|KN motif and ankyrin repeat domains 4##NM_181712|KANK4|163782|KN motif and ankyrin repeat domains 4##AK091941|KANK4|163782|KN motif and ankyrin repeat domains 4##NM_001164835|L1TD1|54596|LINE-1 type transposase domain containing 1##NM_019079|L1TD1|54596|LINE-1 type transposase domain containing 1##BC012555|L1TD1|54596|LINE-1 type transposase domain containing 1##BC060808|L1TD1|54596|LINE-1 type transposase domain containing 1##AB211065|L1TD1|54596|LINE-1 type transposase domain containing 1##AL834314|L1TD1|54596|LINE-1 type transposase domain containing 1##AK001973|L1TD1|54596|LINE-1 type transposase domain containing 1##BC111559|L1TD1|54596|LINE-1 type transposase domain containing 1##NM_001017415|USP1|7398|ubiquitin specific peptidase 1##NM_001017416|USP1|7398|ubiquitin specific peptidase 1##BC040140|USP1|7398|ubiquitin specific peptidase 1##BC018745|USP1|7398|ubiquitin specific peptidase 1##NM_003368|USP1|7398|ubiquitin specific peptidase 1##BC050525|USP1|7398|ubiquitin specific peptidase 1	0.315799	CTCF.p2:8:0.316
chr1	66865699	66865879	reg1035839.p1	3.804	+	TSC_hg19_v1_chr1_+_66798096 AK294441	-67694	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	-67936	+	AB209081 NM_001037340 AK290006	-407386	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	134095	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	352335	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	352376	+	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1	0.0	
chr18	48951938	48952086	reg1037067.p1	3.804	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-227972	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-228300	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-228786	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	914529	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	915101	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2738980	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.0	
chr20	35636441	35636544	reg1040339.p1	3.804	+	TSC_hg19_v1_chr20_-_35580196 AK027811 NM_015474	-56277	-	AF228421 AK315169 TSC_hg19_v1_chr20_-_35580179	-56315	-	TSC_hg19_v1_chr20_-_35580112 AK304795 AL050267	-56379	-	AB384850 DQ890612 DQ893783 CU689312 TSC_hg19_v1_chr20_-_35724395 AK308096 BC032247 AK290380 L14812	87873	-	TSC_hg19_v1_chr20_-_35724401 AK310870 NM_002895 NM_183404	87915	-	TSC_hg19_v1_chr20_+_35807496 NM_001135771 NM_002951 Y00282	170982	+	AK027811|SAMHD1|25939|SAM domain and HD domain 1##NM_015474|SAMHD1|25939|SAM domain and HD domain 1##AF228421|SAMHD1|25939|SAM domain and HD domain 1##AK315169|SAMHD1|25939|SAM domain and HD domain 1##AK304795|SAMHD1|25939|SAM domain and HD domain 1##AL050267|SAMHD1|25939|SAM domain and HD domain 1##DQ890612|RBL1|5933|retinoblastoma-like 1 (p107)##DQ893783|RBL1|5933|retinoblastoma-like 1 (p107)##AK308096|RBL1|5933|retinoblastoma-like 1 (p107)##BC032247|RBL1|5933|retinoblastoma-like 1 (p107)##AK290380|RBL1|5933|retinoblastoma-like 1 (p107)##L14812|RBL1|5933|retinoblastoma-like 1 (p107)##AK310870|RBL1|5933|retinoblastoma-like 1 (p107)##NM_002895|RBL1|5933|retinoblastoma-like 1 (p107)##NM_183404|RBL1|5933|retinoblastoma-like 1 (p107)##NM_001135771|RPN2|6185|ribophorin II##NM_002951|RPN2|6185|ribophorin II##Y00282|RPN2|6185|ribophorin II	0.21559	CTCF.p2:-23:0.216
chr21	37258601	37258704	reg1036155.p1	3.804	+	AK310646 TSC_hg19_v1_chr21_-_36421641 D43969	-837017	-	TSC_hg19_v1_chr21_-_36421598 NM_001754	-837049	-	TSC_hg19_v1_chr21_-_36421585 AK310587 D89788 D89789 D89790	-837071	-	AK095215 BC002898 TSC_hg19_v1_chr21_-_37432613 AB004853 NM_001007259 AF391112 AK001660	173968	-	BC036556 TSC_hg19_v1_chr21_-_37432809 AK300009 NM_017438	174164	-	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	183601	+	D43969|RUNX1|861|runt-related transcription factor 1##NM_001754|RUNX1|861|runt-related transcription factor 1##AK310587|RUNX1|861|runt-related transcription factor 1##D89788|RUNX1|861|runt-related transcription factor 1##D89789|RUNX1|861|runt-related transcription factor 1##D89790|RUNX1|861|runt-related transcription factor 1##AK095215|SETD4|54093|SET domain containing 4##BC002898|SETD4|54093|SET domain containing 4##AB004853|SETD4|54093|SET domain containing 4##NM_001007259|SETD4|54093|SET domain containing 4##AF391112|SETD4|54093|SET domain containing 4##AK001660|SETD4|54093|SET domain containing 4##BC036556|SETD4|54093|SET domain containing 4##AK300009|SETD4|54093|SET domain containing 4##NM_017438|SETD4|54093|SET domain containing 4##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1	0.228492	CTCF.p2:-20:0.228
chr2	200820224	200820405	reg1035117.p1	3.804	+	TSC_hg19_v1_chr2_-_200820204 HQ258367 AK298977 BC025758 AK095272 BC132835 BC136837 BC144420 BX648265 AK293064	-102	-	TSC_hg19_v1_chr2_+_200820311 AK026208 NM_024520	-158	+	TSC_hg19_v1_chr2_+_200776033 BC036456 AK303210	-44278	+	BX647677 NM_001039693	144	-	TSC_hg19_v1_chr2_+_200820507 BC017959 CU676122	202	+	NM_015535 AK290496	350295	+	HQ258367|TYW5|129450|tRNA-yW synthesizing protein 5##AK298977|TYW5|129450|tRNA-yW synthesizing protein 5##BC025758|TYW5|129450|tRNA-yW synthesizing protein 5##AK095272|TYW5|129450|tRNA-yW synthesizing protein 5##BC132835|TYW5|129450|tRNA-yW synthesizing protein 5##BC136837|TYW5|129450|tRNA-yW synthesizing protein 5##BC144420|TYW5|129450|tRNA-yW synthesizing protein 5##BX648265|TYW5|129450|tRNA-yW synthesizing protein 5##AK293064|TYW5|129450|tRNA-yW synthesizing protein 5##AK026208|C2orf47|79568|chromosome 2 open reading frame 47##NM_024520|C2orf47|79568|chromosome 2 open reading frame 47##BC036456|C2orf69|205327|chromosome 2 open reading frame 69##BX647677|TYW5|129450|tRNA-yW synthesizing protein 5##NM_001039693|TYW5|129450|tRNA-yW synthesizing protein 5##BC017959|C2orf47|79568|chromosome 2 open reading frame 47##NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like	0.0	
chr2	97970821	97970910	reg1037950.p1	3.804	+	AY358571 NM_001164315 BX647769 TSC_hg19_v1_chr2_+_97779310 AK304740 AK316541 AK307629 BC046186 BC128262 BC128517 CU692324	-191512	+	TSC_hg19_v1_chr2_-_97760578 AK295056 BC064511 NM_199336	-210274	-	NM_001122646	-318565	-	CU687166 TSC_hg19_v1_chr2_-_98206176	235297	-	BC071771 BC017427 TSC_hg19_v1_chr2_-_98206339 AK074570 NM_025190	235475	-	TSC_hg19_v1_chr2_+_98262533 BC006229 NM_001862 AB463554 M19961 BT006742 CR541727 CR541753 DQ890572 EU176480	291672	+	AY358571|ANKRD36|375248|ankyrin repeat domain 36##NM_001164315|ANKRD36|375248|ankyrin repeat domain 36##BX647769|ANKRD36|375248|ankyrin repeat domain 36##AK304740|ANKRD36|375248|ankyrin repeat domain 36##AK316541|ANKRD36|375248|ankyrin repeat domain 36##AK307629|ANKRD36|375248|ankyrin repeat domain 36##BC046186|ANKRD36|375248|ankyrin repeat domain 36##BC128262|ANKRD36|375248|ankyrin repeat domain 36##BC128517|ANKRD36|375248|ankyrin repeat domain 36##AK295056|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##BC064511|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##NM_199336|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##NM_001122646|FAM178B|51252|family with sequence similarity 178, member B##BC071771|ANKRD36B|57730|ankyrin repeat domain 36B##BC017427|ANKRD36B|57730|ankyrin repeat domain 36B##AK074570|ANKRD36B|57730|ankyrin repeat domain 36B##NM_025190|ANKRD36B|57730|ankyrin repeat domain 36B##BC006229|COX5B|1329|cytochrome c oxidase subunit Vb##NM_001862|COX5B|1329|cytochrome c oxidase subunit Vb##M19961|COX5B|1329|cytochrome c oxidase subunit Vb##BT006742|COX5B|1329|cytochrome c oxidase subunit Vb##CR541727|COX5B|1329|cytochrome c oxidase subunit Vb##CR541753|COX5B|1329|cytochrome c oxidase subunit Vb##DQ890572|COX5B|1329|cytochrome c oxidase subunit Vb##EU176480|COX5B|1329|cytochrome c oxidase subunit Vb	0.795955	CTCF.p2:-1:0.796
chr4	153856500	153856596	reg1033792.p2	3.804	+	TSC_hg19_v1_chr4_+_153701117 AK290472 U52521 BC103759 BC105114 BC105116 BC143675 BC143676 AK096509	-155421	+	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	-155527	+	BC037869 NM_145720	-155645	-	NM_033393 AB051514	7642	+	BC011052 NM_001130067	217721	+	TSC_hg19_v1_chr4_+_154125594 AK308731 NM_015271 AB011089 AF220018	269057	+	AK290472|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##U52521|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC103759|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105114|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC105116|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143675|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC143676|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK096509|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##BC037869|TIGD4|201798|tigger transposable element derived 4##NM_145720|TIGD4|201798|tigger transposable element derived 4##NM_033393|FHDC1|85462|FH2 domain containing 1##AB051514|FHDC1|85462|FH2 domain containing 1##BC011052|TRIM2|23321|tripartite motif containing 2##NM_001130067|TRIM2|23321|tripartite motif containing 2##AK308731|TRIM2|23321|tripartite motif containing 2##NM_015271|TRIM2|23321|tripartite motif containing 2##AB011089|TRIM2|23321|tripartite motif containing 2##AF220018|TRIM2|23321|tripartite motif containing 2	0.013327	
chr9	134120229	134120341	reg1036462.p1	3.804	+	TSC_hg19_v1_chr9_+_134001016 D14689 AB159230	-119235	+	TSC_hg19_v1_chr9_+_134000975 BC105998 AK307573 NM_005085 AL832609 X64228 BC045620 BC012500	-119311	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	-148327	+	BC049388 NM_033387 AK095423	31634	-	TSC_hg19_v1_chr9_+_134165108 AK075207 NM_032728 BC006362 AK027568 AK315502 AB385550	44943	+	TSC_hg19_v1_chr9_+_134269515 BC002872	149281	+	D14689|NUP214|8021|nucleoporin 214kDa##AB159230|NUP214|8021|nucleoporin 214kDa##BC105998|NUP214|8021|nucleoporin 214kDa##AK307573|NUP214|8021|nucleoporin 214kDa##NM_005085|NUP214|8021|nucleoporin 214kDa##AL832609|NUP214|8021|nucleoporin 214kDa##X64228|NUP214|8021|nucleoporin 214kDa##BC045620|NUP214|8021|nucleoporin 214kDa##BC012500|NUP214|8021|nucleoporin 214kDa##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like##BC049388|FAM78A|286336|family with sequence similarity 78, member A##NM_033387|FAM78A|286336|family with sequence similarity 78, member A##AK095423|FAM78A|286336|family with sequence similarity 78, member A##AK075207|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##NM_032728|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC006362|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK027568|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK315502|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC002872|PRRC2B|84726|proline-rich coiled-coil 2B	0.0	
chrY	26324417	26324518	reg1027752.p1	3.804	+	AF000981 AF080597 AK292318 BC033041 NM_001003894 NM_001003895 NM_004680 NM_170723 AK292375	-130319	-	NM_020364 NM_020420 AK302690 NM_001005785 NM_001005786 NM_020363 AF414184 BC047480 AK302398 BC036648 BC047617 U21663 AF248480 AF248481 BC113005 BC113006	-958780	+	BC114927 AF248482 BC047617 U21663 BC047480 NM_004081 NM_001005375 NM_020420	-979306	-	AF000980 NM_001002760 NM_001002761 NM_004678	439683	+	BC113005 BC047617 BC047480 NM_020364 NM_020420	635063	-	NM_001005375 NM_020364 NM_020420 NM_001005785 NM_001005786 AF414184 BC047480 BC036648 BC047617 U21663 AF248480 AF248482 AF248481 BC113005 BC113006	655606	+	AF000981|CDY1|9085|chromodomain protein, Y-linked, 1##AF080597|CDY1|9085|chromodomain protein, Y-linked, 1##AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B##BC033041|CDY1|9085|chromodomain protein, Y-linked, 1##NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1##NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1##AK292375|CDY1|9085|chromodomain protein, Y-linked, 1##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##AK302690|DAZ2|57055|deleted in azoospermia 2##NM_001005785|DAZ2|57055|deleted in azoospermia 2##NM_001005786|DAZ2|57055|deleted in azoospermia 2##NM_020363|DAZ2|57055|deleted in azoospermia 2##AF414184|DAZ2|57055|deleted in azoospermia 2##BC047480|DAZ4|57135|deleted in azoospermia 4##AK302398|DAZ2|57055|deleted in azoospermia 2##BC036648|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##U21663|DAZ2|57055|deleted in azoospermia 2##AF248480|DAZ2|57055|deleted in azoospermia 2##AF248481|DAZ3|57054|deleted in azoospermia 3##BC113005|DAZ3|57054|deleted in azoospermia 3##BC113006|DAZ2|57055|deleted in azoospermia 2##BC114927|DAZ1|1617|deleted in azoospermia 1##AF248482|DAZ4|57135|deleted in azoospermia 4##BC047617|DAZ4|57135|deleted in azoospermia 4##U21663|DAZ2|57055|deleted in azoospermia 2##BC047480|DAZ4|57135|deleted in azoospermia 4##NM_004081|DAZ1|1617|deleted in azoospermia 1##NM_001005375|DAZ4|57135|deleted in azoospermia 4##NM_020420|DAZ4|57135|deleted in azoospermia 4##AF000980|BPY2|9083|basic charge, Y-linked, 2##NM_001002760|BPY2B|442867|basic charge, Y-linked, 2B##NM_001002761|BPY2C|442868|basic charge, Y-linked, 2C##NM_004678|BPY2|9083|basic charge, Y-linked, 2##BC113005|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##BC047480|DAZ4|57135|deleted in azoospermia 4##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##NM_001005375|DAZ4|57135|deleted in azoospermia 4##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##NM_001005785|DAZ2|57055|deleted in azoospermia 2##NM_001005786|DAZ2|57055|deleted in azoospermia 2##AF414184|DAZ2|57055|deleted in azoospermia 2##BC047480|DAZ4|57135|deleted in azoospermia 4##BC036648|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##U21663|DAZ2|57055|deleted in azoospermia 2##AF248480|DAZ2|57055|deleted in azoospermia 2##AF248482|DAZ4|57135|deleted in azoospermia 4##AF248481|DAZ3|57054|deleted in azoospermia 3##BC113005|DAZ3|57054|deleted in azoospermia 3##BC113006|DAZ2|57055|deleted in azoospermia 2	0.919612	CTCF.p2:2:0.920
chr10	76607976	76608088	reg1036676.p1	3.803	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-21678	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-671445	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-671502	+	AY686755 NM_001003892 BC137321 BC137322	210273	-	AB027004 AB103375 NM_016364	251215	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	260882	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr12	95071656	95071804	reg1031830.p1	3.803	+	EU831778 EU831856 BC040535 NM_020698	-27466	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-217998	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-218088	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	325740	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	325786	-	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	395568	-	EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	0.0	
chr1	63470685	63470783	reg1031234.p1	3.803	+	TSC_hg19_v1_chr1_+_63249807 NM_032852 NM_178221 AK027773 BC018678 BC033024 BC008395	-220921	+	DQ341187 TSC_hg19_v1_chr1_-_63154045 AK055401 NM_033407 AK292640	-316607	-	NM_014495 AK315304 TSC_hg19_v1_chr1_+_63063190 AK289426 BC007059 BC058287 AY358273 AF152562 AB590604 CU691298	-407523	+	AB464527 NM_012183	317995	+	TSC_hg19_v1_chr1_+_63789065 L12142	318350	+	NM_013339 AF063604 TSC_hg19_v1_chr1_+_63833313	362553	+	NM_032852|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_178221|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##AK027773|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC018678|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC033024|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC008395|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##DQ341187|DOCK7|85440|dedicator of cytokinesis 7##AK055401|DOCK7|85440|dedicator of cytokinesis 7##NM_033407|DOCK7|85440|dedicator of cytokinesis 7##AK292640|DOCK7|85440|dedicator of cytokinesis 7##NM_014495|ANGPTL3|27329|angiopoietin-like 3##AK315304|ANGPTL3|27329|angiopoietin-like 3##AK289426|ANGPTL3|27329|angiopoietin-like 3##BC007059|ANGPTL3|27329|angiopoietin-like 3##BC058287|ANGPTL3|27329|angiopoietin-like 3##AY358273|ANGPTL3|27329|angiopoietin-like 3##AF152562|ANGPTL3|27329|angiopoietin-like 3##NM_012183|FOXD3|27022|forkhead box D3##L12142|FOXD3|27022|forkhead box D3##NM_013339|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF063604|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	0.941498	CTCF.p2:4:0.941
chr17	7155758	7155865	reg1033115.p2	3.803	+	NM_203415 TSC_hg19_v1_chr17_+_7155631 NM_015362 NM_203413 NM_203414 BC002762 AK225983 AK289940	-310	+	BC009295 NM_015343 TSC_hg19_v1_chr17_-_7155296	-529	-	NM_001143775 TSC_hg19_v1_chr17_-_7155018	-777	-	AB013910 TSC_hg19_v1_chr17_+_7155880 AF070658 AF087868 CU678174 AF163262	58	+	BC001055 AK313958 TSC_hg19_v1_chr17_-_7165798	9982	-	NM_001185023 NM_001307	10452	-	NM_203415|C17orf81|23587|chromosome 17 open reading frame 81##NM_015362|C17orf81|23587|chromosome 17 open reading frame 81##NM_203413|C17orf81|23587|chromosome 17 open reading frame 81##NM_203414|C17orf81|23587|chromosome 17 open reading frame 81##BC002762|C17orf81|23587|chromosome 17 open reading frame 81##AK225983|C17orf81|23587|chromosome 17 open reading frame 81##AK289940|C17orf81|23587|chromosome 17 open reading frame 81##BC009295|CTDNEP1|23399|CTD nuclear envelope phosphatase 1##NM_015343|CTDNEP1|23399|CTD nuclear envelope phosphatase 1##NM_001143775|CTDNEP1|23399|CTD nuclear envelope phosphatase 1##AB013910|C17orf81|23587|chromosome 17 open reading frame 81##AF070658|C17orf81|23587|chromosome 17 open reading frame 81##AF087868|C17orf81|23587|chromosome 17 open reading frame 81##AF163262|C17orf81|23587|chromosome 17 open reading frame 81##BC001055|CLDN7|1366|claudin 7##AK313958|CLDN7|1366|claudin 7##NM_001185023|CLDN7|1366|claudin 7##NM_001307|CLDN7|1366|claudin 7	0.893564	CTCF.p2:22:0.894
chr8	85919804	85919945	reg1029211.p1	3.803	+	NM_001100391 BC031090	-822770	+	TSC_hg19_v1_chr8_+_85095702 AK095026	-824139	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	-824331	+	AK300234 NM_033402 TSC_hg19_v1_chr8_+_86019350	99473	+	TSC_hg19_v1_chr8_+_86019442 BC030701 BC070092 AK056185 AK300874 AK302648 AK307350 AK307636 AK307443	99595	+	NM_001083588 NM_001951 U31556 TSC_hg19_v1_chr8_+_86089622 Z78409 X86097	169747	+	NM_001100391|RALYL|138046|RALY RNA binding protein-like##BC031090|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK300234|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_033402|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC030701|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##BC070092|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK056185|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK300874|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK302648|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307350|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307636|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##AK307443|LRRCC1|85444|leucine rich repeat and coiled-coil domain containing 1##NM_001083588|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001951|E2F5|1875|E2F transcription factor 5, p130-binding##U31556|E2F5|1875|E2F transcription factor 5, p130-binding##Z78409|E2F5|1875|E2F transcription factor 5, p130-binding##X86097|E2F5|1875|E2F transcription factor 5, p130-binding	0.0	
chr10	112680426	112680542	reg1030193.p2	3.802	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-1104	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-1124	+	TSC_hg19_v1_chr10_+_112679309 NM_007373	-1189	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	156368	+	AB046780 TSC_hg19_v1_chr10_-_113933602	1253077	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	1263021	-	BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##NM_007373|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	0.0	
chr10	25989863	25990023	reg1033664.p2	3.802	+	AY528411 NM_020752	-525654	+	NM_024838 TSC_hg19_v1_chr10_+_25305540 AK125249 BC035132 BX647989	-684393	+	CU693144 DQ892076 DQ895269 BC064597 AK095021 NM_145010 AY454125 AK292495 BC026165	-684969	-	NM_017433	233058	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	233237	+	NM_000818 NM_001134366	515292	+	AY528411|GPR158|57512|G protein-coupled receptor 158##NM_020752|GPR158|57512|G protein-coupled receptor 158##NM_024838|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AK125249|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BC035132|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BX647989|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##DQ892076|ENKUR|219670|enkurin, TRPC channel interacting protein##DQ895269|ENKUR|219670|enkurin, TRPC channel interacting protein##AK095021|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_145010|ENKUR|219670|enkurin, TRPC channel interacting protein##AY454125|ENKUR|219670|enkurin, TRPC channel interacting protein##AK292495|ENKUR|219670|enkurin, TRPC channel interacting protein##BC026165|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_017433|MYO3A|53904|myosin IIIA##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)	0.997134	CTCF.p2:2:0.997
chr10	52257595	52257666	reg1030454.p1	3.802	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-249290	-	NM_018232	-419745	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-429908	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	126073	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	242080	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	387763	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.0	
chr1	181159868	181160010	reg1001490.p2	3.802	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-102074	+	NM_016545	-102302	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-156789	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	292761	+	BC137223 BC137224 AK128654 NM_001009992	870858	-	TSC_hg19_v1_chr1_-_182354649 AK301600	1194743	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.0	
chr14	62356729	62356908	reg1032464.p1	3.802	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	-127699	+	FJ790247 NM_001243084	-192479	+	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	-194628	+	AJ617628 NM_031914 BC117363 BC143598 HQ258344 AB102949	105820	+	TSC_hg19_v1_chr14_+_62584125 BX248751	227340	+	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	1155111	-	AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AJ617628|SYT16|83851|synaptotagmin XVI##NM_031914|SYT16|83851|synaptotagmin XVI##BC117363|SYT16|83851|synaptotagmin XVI##BC143598|SYT16|83851|synaptotagmin XVI##HQ258344|SYT16|83851|synaptotagmin XVI##AB102949|SYT16|83851|synaptotagmin XVI##BX248751|FLJ43390|646113|uncharacterized LOC646113##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5	0.0	
chr14	64968729	64968817	reg1041308.p1	3.802	+	AK315336 NM_004857 BC057229	-36513	+	TSC_hg19_v1_chr14_+_64855070 AK095514 AK312361 BC050420 AK309266 BC009806 J04031 AB384767 DQ893634 DQ896853	-113677	+	AK302747 NM_005956	-114020	+	TSC_hg19_v1_chr14_-_64970524 NM_006977 BC035804	1670	-	TSC_hg19_v1_chr14_+_64971227 BX248777 NM_001123329 NM_014950	2485	+	TSC_hg19_v1_chr14_+_64971443 AB023214	2670	+	AK315336|AKAP5|9495|A kinase (PRKA) anchor protein 5##NM_004857|AKAP5|9495|A kinase (PRKA) anchor protein 5##BC057229|AKAP5|9495|A kinase (PRKA) anchor protein 5##AK312361|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC050420|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK309266|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC009806|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##J04031|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ893634|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ896853|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK302747|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_005956|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_006977|ZBTB25|7597|zinc finger and BTB domain containing 25##BC035804|ZBTB25|7597|zinc finger and BTB domain containing 25##BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1##AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1	0.0	
chr15	52408586	52408670	reg1037783.p2	3.802	+	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	-3682	-	TSC_hg19_v1_chr15_+_52311442 BC035492	-97167	+	TSC_hg19_v1_chr15_+_52311432 CR749401	-97194	+	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	63513	-	TSC_hg19_v1_chr15_+_52472257 AF007131	63707	+	NM_016194	74936	-	AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC035492|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973##NM_016194|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5	0.0	
chr20	4882137	4882209	reg1041129.p2	3.802	+	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	-77979	-	AY154472 NM_170774	-86405	-	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	-179639	+	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	99987	-	BC013112 AF164142 NM_203327	108752	-	TSC_hg19_v1_chr20_-_5093685 AY359115 BC015113 AK055700 BC110408 BC011990 BC009768 BC009770 AF161392 BC009769 AK315606 BC066317 AK309823 BC070212 NM_001009923 NM_001009924 NM_001009925 NM_014145	211442	-	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##BC013112|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AF164142|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_203327|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AY359115|C20orf30|29058|chromosome 20 open reading frame 30##BC015113|C20orf30|29058|chromosome 20 open reading frame 30##AK055700|C20orf30|29058|chromosome 20 open reading frame 30##BC110408|C20orf30|29058|chromosome 20 open reading frame 30##BC011990|C20orf30|29058|chromosome 20 open reading frame 30##BC009768|C20orf30|29058|chromosome 20 open reading frame 30##BC009770|C20orf30|29058|chromosome 20 open reading frame 30##AF161392|C20orf30|29058|chromosome 20 open reading frame 30##BC009769|C20orf30|29058|chromosome 20 open reading frame 30##AK315606|C20orf30|29058|chromosome 20 open reading frame 30##BC066317|C20orf30|29058|chromosome 20 open reading frame 30##AK309823|C20orf30|29058|chromosome 20 open reading frame 30##BC070212|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009923|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009924|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009925|C20orf30|29058|chromosome 20 open reading frame 30##NM_014145|C20orf30|29058|chromosome 20 open reading frame 30	0.017013	
chr2	167373312	167373436	reg1034972.p1	3.802	+	TSC_hg19_v1_chr2_-_167350721 BC062699	-22676	-	AK308450 TSC_hg19_v1_chr2_-_167350647	-22758	-	BC141864 M91556 NM_002976	-29896	-	EF119718 EF119719 EF119720 EF119721 EF119722 NM_001079810 NM_001199143 NM_152381 AK097519	371622	+	EF119711 EF119717 NM_001199144 NM_001199145	670418	+	NM_020981	1301807	+	BC062699|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##AK308450|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##BC141864|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##M91556|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##NM_002976|SCN7A|6332|sodium channel, voltage-gated, type VII, alpha##EF119718|XIRP2|129446|xin actin-binding repeat containing 2##EF119719|XIRP2|129446|xin actin-binding repeat containing 2##EF119720|XIRP2|129446|xin actin-binding repeat containing 2##EF119721|XIRP2|129446|xin actin-binding repeat containing 2##EF119722|XIRP2|129446|xin actin-binding repeat containing 2##NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199143|XIRP2|129446|xin actin-binding repeat containing 2##NM_152381|XIRP2|129446|xin actin-binding repeat containing 2##AK097519|XIRP2|129446|xin actin-binding repeat containing 2##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1	0.998626	CTCF.p2:29:0.999
chr2	32062498	32062601	reg1032181.p2	3.802	+	EU832809 GQ129244 HQ258121 M74047 EF560740 AK316597 BC112252 BC113641 NM_000348	-256546	-	TSC_hg19_v1_chr2_-_31637599 NM_000379	-424938	-	TSC_hg19_v1_chr2_-_31637569 U39487 D11456 U06117	-424978	-	TSC_hg19_v1_chr2_-_32235713 AF363446 BC018733 NM_001137602 NM_015955	173109	-	TSC_hg19_v1_chr2_-_32235732 AB041018	173179	-	TSC_hg19_v1_chr2_-_32235815 BC070046	173273	-	EU832809|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##GQ129244|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##HQ258121|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##M74047|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##EF560740|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##AK316597|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC112252|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC113641|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000348|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000379|XDH|7498|xanthine dehydrogenase##U39487|XDH|7498|xanthine dehydrogenase##D11456|XDH|7498|xanthine dehydrogenase##U06117|XDH|7498|xanthine dehydrogenase##AF363446|MEMO1|51072|mediator of cell motility 1##BC018733|MEMO1|51072|mediator of cell motility 1##NM_001137602|MEMO1|51072|mediator of cell motility 1##NM_015955|MEMO1|51072|mediator of cell motility 1##AB041018|MEMO1|51072|mediator of cell motility 1##BC070046|MEMO1|51072|mediator of cell motility 1	0.1142	
chr5	127419539	127419670	reg1033558.p1	3.802	+	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	-131	+	AK090949 AX746698 TSC_hg19_v1_chr5_-_127419417	-245	-	TSC_hg19_v1_chr5_-_127418765 AF088062 BX648677 BC036629	-841	-	TSC_hg19_v1_chr5_-_127873553 AK300440	453913	-	NM_001999 TSC_hg19_v1_chr5_-_127873939 AF193046	454237	-	TSC_hg19_v1_chr5_+_128300789 BC041945	881199	+	AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##AK090949|FLJ33630|644873|uncharacterized LOC644873##AF088062|FLJ33630|644873|uncharacterized LOC644873##BX648677|FLJ33630|644873|uncharacterized LOC644873##BC036629|FLJ33630|644873|uncharacterized LOC644873##AK300440|FBN2|2201|fibrillin 2##NM_001999|FBN2|2201|fibrillin 2##AF193046|FBN2|2201|fibrillin 2##BC041945|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6	0.189103	
chr8	38834997	38835157	reg1029320.p1	3.802	+	NM_153692 AK075205 BC057765 AK300197	-3368	+	AK098787 NM_021623 TSC_hg19_v1_chr8_+_38758793 AK296068 AK291842 AF286164	-76266	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	-190309	+	AL834224 BC004878 BC109050 BC109049 AF353991 AK075027 TSC_hg19_v1_chr8_-_38854016 AK225093	18935	-	TSC_hg19_v1_chr8_-_38854029 AK314703 AK075155 NM_001024380 NM_001024381 NM_031940 NM_078473	18955	-	TSC_hg19_v1_chr8_+_38854491 BC027996 NM_003816 U41766	19399	+	NM_153692|HTRA4|203100|HtrA serine peptidase 4##AK075205|HTRA4|203100|HtrA serine peptidase 4##BC057765|HTRA4|203100|HtrA serine peptidase 4##AK300197|HTRA4|203100|HtrA serine peptidase 4##AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AL834224|TM2D2|83877|TM2 domain containing 2##BC004878|TM2D2|83877|TM2 domain containing 2##BC109050|TM2D2|83877|TM2 domain containing 2##BC109049|TM2D2|83877|TM2 domain containing 2##AF353991|TM2D2|83877|TM2 domain containing 2##AK075027|TM2D2|83877|TM2 domain containing 2##AK225093|TM2D2|83877|TM2 domain containing 2##AK314703|TM2D2|83877|TM2 domain containing 2##AK075155|TM2D2|83877|TM2 domain containing 2##NM_001024380|TM2D2|83877|TM2 domain containing 2##NM_001024381|TM2D2|83877|TM2 domain containing 2##NM_031940|TM2D2|83877|TM2 domain containing 2##NM_078473|TM2D2|83877|TM2 domain containing 2##BC027996|ADAM9|8754|ADAM metallopeptidase domain 9##NM_003816|ADAM9|8754|ADAM metallopeptidase domain 9##U41766|ADAM9|8754|ADAM metallopeptidase domain 9	0.0	
chr11	103733338	103733435	reg1034430.p1	3.801	+	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	-753187	+	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	-770463	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	-770645	-	NM_001001711 AF429971 AK093336 AX748060 BC022018 BC022017 BC021710 BC021172	173952	+	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	301408	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	301654	-	AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_001001711|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AF429971|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK093336|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022018|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022017|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021710|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021172|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D	0.0	
chr14	52421550	52421679	reg1037338.p2	3.801	+	TSC_hg19_v1_chr14_+_52327416 BC020774	-94178	+	TSC_hg19_v1_chr14_+_52327387 AL832878	-94222	+	AK001024 AK311334 TSC_hg19_v1_chr14_+_52327363	-94250	+	AF087877 AF100755 AF151857 DQ525179 NM_016039 TSC_hg19_v1_chr14_+_52456231 AK312004 BC001722	34640	+	TSC_hg19_v1_chr14_+_52456323 EU446806 AB463506 AY817175	34725	+	AJ223500 D86425 AB385187 CU690132 TSC_hg19_v1_chr14_-_52535721	114108	-	BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AL832878|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AF087877|C14orf166|51637|chromosome 14 open reading frame 166##AF100755|C14orf166|51637|chromosome 14 open reading frame 166##AF151857|C14orf166|51637|chromosome 14 open reading frame 166##DQ525179|C14orf166|51637|chromosome 14 open reading frame 166##NM_016039|C14orf166|51637|chromosome 14 open reading frame 166##AK312004|C14orf166|51637|chromosome 14 open reading frame 166##BC001722|C14orf166|51637|chromosome 14 open reading frame 166##EU446806|C14orf166|51637|chromosome 14 open reading frame 166##AY817175|C14orf166|51637|chromosome 14 open reading frame 166##AJ223500|NID2|22795|nidogen 2 (osteonidogen)##D86425|NID2|22795|nidogen 2 (osteonidogen)	0.0	
chr14	72468461	72468642	reg1031051.p2	3.801	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-68685	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-69398	+	AK294895 NM_001204423	-69735	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	892257	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	924584	+	AK098542 AF311602 NM_178441	985106	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.19489	
chr16	48570385	48570546	reg1033749.p2	3.801	+	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	-151213	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	-170674	-	BC042550 TSC_hg19_v1_chr16_-_48399765	-170705	-	BC051897 TSC_hg19_v1_chr16_-_48644092 AB014515 BC152472 NM_153029	73651	-	AB527638 TSC_hg19_v1_chr16_-_49315397	744928	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	745035	-	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC042550|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC051897|N4BP1|9683|NEDD4 binding protein 1##AB014515|N4BP1|9683|NEDD4 binding protein 1##BC152472|N4BP1|9683|NEDD4 binding protein 1##NM_153029|N4BP1|9683|NEDD4 binding protein 1##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor	0.0	
chr16	85061179	85061245	reg1036626.p1	3.801	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-16083	-	TSC_hg19_v1_chr16_-_85045098 AK225768	-16119	-	TSC_hg19_v1_chr16_+_84853586 NM_031476 AY358790 AK303887 AK308396 AY358413 BC063012 BC007689 AL136861 AK027395	-207609	+	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	158	+	BC093665 BC111944 AK126284 NM_198491	84842	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	583809	+	BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK225768|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_031476|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AY358790|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK303887|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK308396|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC063012|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##BC007689|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AL136861|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK027395|CRISPLD2|83716|cysteine-rich secretory protein LCCL domain containing 2##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182	0.0	
chr1	78149199	78149333	reg1034499.p1	3.801	+	TSC_hg19_v1_chr1_-_78149099 BC035079 BC035079	-68	-	TSC_hg19_v1_chr1_-_78148354 BX641096 BX641096 AK310514 BX641001 BX641001 NM_015534	-911	-	AY171600 BC033896 NM_012093	-400980	+	TSC_hg19_v1_chr1_-_78225538 BC016663 AK308402 AB029020 AF383172 AF383173 AK022864 NM_015017 NM_201624 NM_201626	76186	-	TSC_hg19_v1_chr1_+_78245342 BX537792 NM_198549 BC130387 BC144167 AK296411 AK092412 AX747532	96068	+	NM_001172309 NM_144573 AK298565 AK300728 AK307487 CR936630 BX648546 DQ464902 AF176780 AY211912 TSC_hg19_v1_chr1_+_78354351 BC055084	205046	+	BC035079|ZZZ3|26009|zinc finger, ZZ-type containing 3##BC035079|ZZZ3|26009|zinc finger, ZZ-type containing 3##BX641096|ZZZ3|26009|zinc finger, ZZ-type containing 3##BX641096|ZZZ3|26009|zinc finger, ZZ-type containing 3##AK310514|ZZZ3|26009|zinc finger, ZZ-type containing 3##BX641001|ZZZ3|26009|zinc finger, ZZ-type containing 3##BX641001|ZZZ3|26009|zinc finger, ZZ-type containing 3##NM_015534|ZZZ3|26009|zinc finger, ZZ-type containing 3##AY171600|AK5|26289|adenylate kinase 5##BC033896|AK5|26289|adenylate kinase 5##NM_012093|AK5|26289|adenylate kinase 5##BC016663|USP33|23032|ubiquitin specific peptidase 33##AK308402|USP33|23032|ubiquitin specific peptidase 33##AB029020|USP33|23032|ubiquitin specific peptidase 33##AF383172|USP33|23032|ubiquitin specific peptidase 33##AF383173|USP33|23032|ubiquitin specific peptidase 33##AK022864|USP33|23032|ubiquitin specific peptidase 33##NM_015017|USP33|23032|ubiquitin specific peptidase 33##NM_201624|USP33|23032|ubiquitin specific peptidase 33##NM_201626|USP33|23032|ubiquitin specific peptidase 33##BX537792|FAM73A|374986|family with sequence similarity 73, member A##NM_198549|FAM73A|374986|family with sequence similarity 73, member A##BC130387|FAM73A|374986|family with sequence similarity 73, member A##BC144167|FAM73A|374986|family with sequence similarity 73, member A##AK296411|FAM73A|374986|family with sequence similarity 73, member A##AK092412|FAM73A|374986|family with sequence similarity 73, member A##NM_001172309|NEXN|91624|nexilin (F actin binding protein)##NM_144573|NEXN|91624|nexilin (F actin binding protein)##AK298565|NEXN|91624|nexilin (F actin binding protein)##AK300728|NEXN|91624|nexilin (F actin binding protein)##AK307487|NEXN|91624|nexilin (F actin binding protein)##CR936630|NEXN|91624|nexilin (F actin binding protein)##BX648546|NEXN|91624|nexilin (F actin binding protein)##DQ464902|NEXN|91624|nexilin (F actin binding protein)##AF176780|NEXN|91624|nexilin (F actin binding protein)##AY211912|NEXN|91624|nexilin (F actin binding protein)##BC055084|NEXN|91624|nexilin (F actin binding protein)	0.012283	
chr19	42076803	42076984	reg1002937.p1	3.801	+	NM_001130514	-127831	+	TSC_hg19_v1_chr19_-_41945831 AK298197 NM_001167869 NM_001167870 NM_001167871 NM_018035	-131060	-	TSC_hg19_v1_chr19_-_41945814 BC013323 AK316313	-131079	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	5684	+	D90276 AK298701 NM_001817	56541	-	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	115259	-	NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##AK298197|ATP5SL|55101|ATP5S-like##NM_001167869|ATP5SL|55101|ATP5S-like##NM_001167870|ATP5SL|55101|ATP5S-like##NM_001167871|ATP5SL|55101|ATP5S-like##NM_018035|ATP5SL|55101|ATP5S-like##BC013323|ATP5SL|55101|ATP5S-like##AK316313|ATP5SL|55101|ATP5S-like##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7	0.0	
chr2	100851947	100852113	reg1029276.p2	3.801	+	BC036895 TSC_hg19_v1_chr2_-_100759026 NM_002285	-93027	-	TSC_hg19_v1_chr2_-_100722359 AK297407 AK092327 AX747484	-129572	-	TSC_hg19_v1_chr2_-_100722267 AK308645	-129762	-	DQ020495 NM_198461	87164	-	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	182067	-	AB164464 NM_001011717	234913	+	BC036895|AFF3|3899|AF4/FMR2 family, member 3##NM_002285|AFF3|3899|AF4/FMR2 family, member 3##AK297407|AFF3|3899|AF4/FMR2 family, member 3##AK092327|AFF3|3899|AF4/FMR2 family, member 3##AK308645|AFF3|3899|AF4/FMR2 family, member 3##DQ020495|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##NM_198461|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S	0.0	
chr3	13082112	13082292	reg1033239.p2	3.801	+	TSC_hg19_v1_chr3_-_13057189 BC071805	-24984	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	-73094	-	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	-140594	-	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	32396	-	AB020713 TSC_hg19_v1_chr3_-_13384784	302563	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	379530	-	AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1##AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##AB020713|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa	0.0	
chr3	179039486	179039633	reg1036938.p1	3.801	+	AK304837 NM_001163677 NM_171828	-54746	-	BC082272 NM_171829	-61881	-	NM_171830	-69915	-	TSC_hg19_v1_chr3_+_179040818 BC026181	1307	+	AB097862 AF003924 NM_016331	1991	+	BC040557 NM_033540 TSC_hg19_v1_chr3_+_179065522 BC020661 AB043589 AK000700 AK314306	25955	+	AK304837|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_001163677|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_171828|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##BC082272|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_171829|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##NM_171830|KCNMB3|27094|potassium large conductance calcium-activated channel, subfamily M beta member 3##BC026181|ZNF639|51193|zinc finger protein 639##AB097862|ZNF639|51193|zinc finger protein 639##AF003924|ZNF639|51193|zinc finger protein 639##NM_016331|ZNF639|51193|zinc finger protein 639##BC040557|MFN1|55669|mitofusin 1##NM_033540|MFN1|55669|mitofusin 1##BC020661|MFN1|55669|mitofusin 1##AB043589|MFN1|55669|mitofusin 1##AK000700|MFN1|55669|mitofusin 1##AK314306|MFN1|55669|mitofusin 1	0.447033	CTCF.p2:1:0.447
chr3	196359149	196359329	reg1030737.p1	3.801	+	TSC_hg19_v1_chr3_+_196295733 NM_001105573	-63507	+	AK025697 TSC_hg19_v1_chr3_+_196295533	-63732	+	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	-63849	-	TSC_hg19_v1_chr3_+_196366647 BC034704	7406	+	BC044233 NM_198565 TSC_hg19_v1_chr3_+_196366658 AY358322	7423	+	AK058155 TSC_hg19_v1_chr3_-_196439156 BC007827 AY099509 NM_032898 AK314070	79877	-	NM_001105573|FBXO45|200933|F-box protein 45##AK025697|FBXO45|200933|F-box protein 45##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53##BC034704|LRRC33|375387|leucine rich repeat containing 33##BC044233|LRRC33|375387|leucine rich repeat containing 33##NM_198565|LRRC33|375387|leucine rich repeat containing 33##AY358322|LRRC33|375387|leucine rich repeat containing 33##AK058155|CEP19|84984|centrosomal protein 19kDa##BC007827|CEP19|84984|centrosomal protein 19kDa##AY099509|CEP19|84984|centrosomal protein 19kDa##NM_032898|CEP19|84984|centrosomal protein 19kDa##AK314070|CEP19|84984|centrosomal protein 19kDa	0.046897	
chr4	103789727	103789875	reg1029953.p1	3.801	+	TSC_hg19_v1_chr4_-_103748970 BC037894 NM_003340 NM_181886 NM_181888 BC003395 AK315775 NM_181889	-40665	-	TSC_hg19_v1_chr4_-_103748709 BC066917 NM_181887 NM_181891 AL833414	-41115	-	AK095822 TSC_hg19_v1_chr4_-_103748316 NM_181892	-41505	-	NM_181893 NM_181890	215	-	TSC_hg19_v1_chr4_+_103790148 NM_001008388	351	+	TSC_hg19_v1_chr4_+_103790197 AK292134 BC020831 BX537971 BC032300 AM392809 AM393385	415	+	BC037894|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_003340|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181886|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181888|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##BC003395|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##AK315775|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181889|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##BC066917|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181887|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181891|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##AL833414|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##AK095822|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181892|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181893|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181890|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_001008388|CISD2|493856|CDGSH iron sulfur domain 2##AK292134|CISD2|493856|CDGSH iron sulfur domain 2##BC020831|CISD2|493856|CDGSH iron sulfur domain 2##BX537971|CISD2|493856|CDGSH iron sulfur domain 2##BC032300|CISD2|493856|CDGSH iron sulfur domain 2##AM392809|CISD2|493856|CDGSH iron sulfur domain 2##AM393385|CISD2|493856|CDGSH iron sulfur domain 2	0.0	
chr4	110482413	110482574	reg1037198.p2	3.801	+	TSC_hg19_v1_chr4_+_110481443 NM_017918 AK291098 BC002633 AK095936 AK311030	-1076	+	TSC_hg19_v1_chr4_+_110354993 BC040137 AK300278	-127318	+	BC117135 BC143268 BC143269 BC143276 TSC_hg19_v1_chr4_+_110354970 NM_001042734 NM_006323	-127545	+	AB590350 DQ894589 EU176306 U20537 TSC_hg19_v1_chr4_-_110624602 BC000305 BC004460 NM_001226 NM_032992 U20536	142098	-	DQ892725 DQ896860 CU677869 TSC_hg19_v1_chr4_-_110651216 AF306567 AF332892 AY359024 BC017218 AK075389 AK313081 NM_030821	168629	-	AB590959 CU676662 J02770 TSC_hg19_v1_chr4_-_110723176 AK290625 BC005275 Y00318 BC020718 AK299232	240673	-	NM_017918|CCDC109B|55013|coiled-coil domain containing 109B##AK291098|CCDC109B|55013|coiled-coil domain containing 109B##BC002633|CCDC109B|55013|coiled-coil domain containing 109B##AK095936|CCDC109B|55013|coiled-coil domain containing 109B##AK311030|CCDC109B|55013|coiled-coil domain containing 109B##BC040137|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##AK300278|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC117135|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143268|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143269|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##BC143276|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_001042734|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##NM_006323|SEC24B|10427|SEC24 family, member B (S. cerevisiae)##DQ894589|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##EU176306|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##U20537|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##BC000305|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##BC004460|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##NM_001226|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##NM_032992|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##U20536|CASP6|839|caspase 6, apoptosis-related cysteine peptidase##DQ892725|PLA2G12A|81579|phospholipase A2, group XIIA##DQ896860|PLA2G12A|81579|phospholipase A2, group XIIA##AF306567|PLA2G12A|81579|phospholipase A2, group XIIA##AF332892|PLA2G12A|81579|phospholipase A2, group XIIA##AY359024|PLA2G12A|81579|phospholipase A2, group XIIA##BC017218|PLA2G12A|81579|phospholipase A2, group XIIA##AK075389|PLA2G12A|81579|phospholipase A2, group XIIA##AK313081|PLA2G12A|81579|phospholipase A2, group XIIA##NM_030821|PLA2G12A|81579|phospholipase A2, group XIIA##J02770|CFI|3426|complement factor I##AK290625|CFI|3426|complement factor I##BC005275|CFI|3426|complement factor I##Y00318|CFI|3426|complement factor I##BC020718|CFI|3426|complement factor I##AK299232|CFI|3426|complement factor I	0.0	
chr4	36352991	36353171	reg1006830.p2	3.801	+	BC157885 NM_001170700	-67438	+	AK131492 NM_001136536 AK304357 AK316523	-69835	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	-107044	-	NM_001144990	893608	+	NM_001104629 BC037906	1102494	+	AK001879 NM_018302 AK225192	1232788	+	BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_001144990|KIAA1239|57495|KIAA1239##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19	0.0	
chr8	4092197	4092304	reg1034187.p1	3.801	+	AK128880 TSC_hg19_v1_chr8_-_2585966	-1506268	-	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-2099048	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-2139342	+	AY017307 TSC_hg19_v1_chr8_-_4852228	759975	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	760044	-	TSC_hg19_v1_chr8_-_6264053 BC036625	2171807	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.031375	
chr9	37295928	37296036	reg1034483.p2	3.801	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-175399	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-175474	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-175496	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	126724	+	BC010007 TSC_hg19_v1_chr9_-_37465267	169278	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	169413	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.028838	
chr1	169085343	169085409	reg1033835.p1	3.800	+	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	-9407	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	-386947	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-539584	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	251716	-	NM_003666 AF288161 U79751 AK223533	251847	+	TSC_hg19_v1_chr1_+_169337450 AK307151 AK291725 BC020716	252073	+	AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_003666|BLZF1|8548|basic leucine zipper nuclear factor 1##AF288161|BLZF1|8548|basic leucine zipper nuclear factor 1##U79751|BLZF1|8548|basic leucine zipper nuclear factor 1##AK223533|BLZF1|8548|basic leucine zipper nuclear factor 1##AK307151|BLZF1|8548|basic leucine zipper nuclear factor 1##AK291725|BLZF1|8548|basic leucine zipper nuclear factor 1##BC020716|BLZF1|8548|basic leucine zipper nuclear factor 1	0.0	
chr19	15272557	15272672	reg1036157.p2	3.800	+	TSC_hg19_v1_chr19_-_15236518 U61263 BC011761 BC011722 NM_006844	-36078	-	BC000109 TSC_hg19_v1_chr19_-_15236004	-36626	-	BC126913 CU680024 CU680048 TSC_hg19_v1_chr19_-_15235944	-36768	-	TSC_hg19_v1_chr19_-_15311808 AB209447 NM_000435 U97669	39184	-	BC132958 BC132960 AK026061 NM_024794	70598	-	BC115002 NM_001142886	71198	-	U61263|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC011761|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC011722|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##NM_006844|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC000109|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##BC126913|ILVBL|10994|ilvB (bacterial acetolactate synthase)-like##AB209447|NOTCH3|4854|notch 3##NM_000435|NOTCH3|4854|notch 3##U97669|NOTCH3|4854|notch 3##BC132958|EPHX3|79852|epoxide hydrolase 3##BC132960|EPHX3|79852|epoxide hydrolase 3##AK026061|EPHX3|79852|epoxide hydrolase 3##NM_024794|EPHX3|79852|epoxide hydrolase 3##BC115002|EPHX3|79852|epoxide hydrolase 3##NM_001142886|EPHX3|79852|epoxide hydrolase 3	0.085664	
chr19	24216249	24216324	reg1027763.p1	3.800	+	TSC_hg19_v1_chr19_+_24216256 AK092150 AK092080 AK303431	-30	+	TSC_hg19_v1_chr19_+_24097711 NM_001244038 AX721133 BC046415 AB593087	-118592	+	TSC_hg19_v1_chr19_+_23945812 BC071971	-270473	+	TSC_hg19_v1_chr19_+_24269988 AF054180 NM_203282 BC056243 AK291286 BC043147 BC139749	53683	+	TSC_hg19_v1_chr19_+_28284377 BC024732	4068102	+	TSC_hg19_v1_chr19_-_28284831 AK311452	4068547	-	AK303431|ZNF254|9534|zinc finger protein 254##NM_001244038|ZNF726|730087|zinc finger protein 726##BC046415|ZNF726|730087|zinc finger protein 726##BC071971|RPSAP58|388524|ribosomal protein SA pseudogene 58##AF054180|ZNF254|9534|zinc finger protein 254##NM_203282|ZNF254|9534|zinc finger protein 254##BC056243|ZNF254|9534|zinc finger protein 254##AK291286|ZNF254|9534|zinc finger protein 254##BC043147|ZNF254|9534|zinc finger protein 254##BC139749|ZNF254|9534|zinc finger protein 254##AK311452|LOC148189|148189|uncharacterized LOC148189	0.0	
chr20	21484253	21484340	reg1023952.p2	3.800	+	NM_033176 TSC_hg19_v1_chr20_-_21378181	-106182	-	BC142960 TSC_hg19_v1_chr20_+_21283980 NM_012255 AK001573 AF064257 BC131775 AY382900 AK303312 AK314602 AL136841 AF152169 BC000315	-200321	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	-377569	+	NM_002509	10367	-	TSC_hg19_v1_chr20_+_21686296 NM_006192	201998	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	202237	+	NM_033176|NKX2-4|644524|NK2 homeobox 4##BC142960|XRN2|22803|5'-3' exoribonuclease 2##NM_012255|XRN2|22803|5'-3' exoribonuclease 2##AK001573|XRN2|22803|5'-3' exoribonuclease 2##AF064257|XRN2|22803|5'-3' exoribonuclease 2##BC131775|XRN2|22803|5'-3' exoribonuclease 2##AY382900|XRN2|22803|5'-3' exoribonuclease 2##AK303312|XRN2|22803|5'-3' exoribonuclease 2##AK314602|XRN2|22803|5'-3' exoribonuclease 2##AL136841|XRN2|22803|5'-3' exoribonuclease 2##AF152169|XRN2|22803|5'-3' exoribonuclease 2##BC000315|XRN2|22803|5'-3' exoribonuclease 2##BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_002509|NKX2-2|4821|NK2 homeobox 2##NM_006192|PAX1|5075|paired box 1##BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1	0.0	
chr3	116060818	116060896	reg1041324.p1	3.800	+	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-718438	+	NM_001130064 NM_002045	-718707	+	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	-1194743	-	AK315286 TSC_hg19_v1_chr3_-_116164338	103474	-	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	103516	-	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	2692676	-	AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43##BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315286|LSAMP|4045|limbic system-associated membrane protein##BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11	0.0	
chr4	73904738	73904821	reg1037719.p1	3.800	+	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	-470288	-	AK290937 NM_001144756 NM_053036 AF236083	-999909	+	AF119815 NM_004885 AK308069 AJ311393	-1007210	+	BC101684 BC143642 TSC_hg19_v1_chr4_-_73935431 AK096310 AY957564 AY957565 BC071812 NM_173827	30664	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	184000	-	TSC_hg19_v1_chr4_-_74124365 AB527094	219580	-	AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AK290937|NPFFR2|10886|neuropeptide FF receptor 2##NM_001144756|NPFFR2|10886|neuropeptide FF receptor 2##NM_053036|NPFFR2|10886|neuropeptide FF receptor 2##AF236083|NPFFR2|10886|neuropeptide FF receptor 2##AF119815|NPFFR2|10886|neuropeptide FF receptor 2##NM_004885|NPFFR2|10886|neuropeptide FF receptor 2##AK308069|NPFFR2|10886|neuropeptide FF receptor 2##AJ311393|NPFFR2|10886|neuropeptide FF receptor 2##BC101684|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC143642|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK096310|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957564|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957565|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC071812|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_173827|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17	0.333411	CTCF.p2:-8:0.333
chr4	76623745	76623813	reg1025110.p2	3.800	+	TSC_hg19_v1_chr4_-_76598625 NM_203504 NM_203505	-25127	-	TSC_hg19_v1_chr4_-_76598595 BC011731 AK291772	-25200	-	AF053535 AF145284 TSC_hg19_v1_chr4_-_76598560	-25219	-	TSC_hg19_v1_chr4_-_76649558 AK311578	25896	-	TSC_hg19_v1_chr4_+_76649761 BC016672 AL832010 BC006398	25985	+	TSC_hg19_v1_chr4_+_76649814 AK314289	26036	+	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)	0.0	
chr5	55352636	55352768	reg1029872.p1	3.800	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-61939	-	NM_001242636 NM_001242639	-203553	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-205433	+	AK123389 NM_024669	176483	-	NM_005921	758197	+	TSC_hg19_v1_chr5_+_56111375 AK307828	758662	+	BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr6	139309652	139309832	reg1007113.p2	3.800	+	TSC_hg19_v1_chr6_-_139309391 BC012764 NM_001128617 NM_031922	-332	-	TSC_hg19_v1_chr6_-_139309357 BC035286 AK312938	-394	-	BC021211 TSC_hg19_v1_chr6_-_139309122 AB209143	-665	-	NM_021243 AF161398 TSC_hg19_v1_chr6_+_139349850	40095	+	TSC_hg19_v1_chr6_+_139349935 AK309402 AF116682 BC014953	40176	+	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	146514	+	BC012764|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_001128617|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_031922|REPS1|85021|RALBP1 associated Eps domain containing 1##BC035286|REPS1|85021|RALBP1 associated Eps domain containing 1##AK312938|REPS1|85021|RALBP1 associated Eps domain containing 1##BC021211|REPS1|85021|RALBP1 associated Eps domain containing 1##AB209143|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_021243|C6orf115|58527|chromosome 6 open reading frame 115##AF161398|C6orf115|58527|chromosome 6 open reading frame 115##AF116682|C6orf115|58527|chromosome 6 open reading frame 115##BC014953|C6orf115|58527|chromosome 6 open reading frame 115##BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)	0.0	
chr6	157173421	157173548	reg1031678.p2	3.800	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-73609	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-74200	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-74259	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	571100	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	571733	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	629055	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	0.0	
chr10	105210940	105211023	reg1038843.p1	3.799	+	TSC_hg19_v1_chr10_+_105156433 BC111040 D80007	-54537	+	TSC_hg19_v1_chr10_+_105156421 BC064486 BC080560	-54563	+	AK293772 AK294971 TSC_hg19_v1_chr10_+_105156399 AK307418 BC049838 NM_014976	-54584	+	AF131810 TSC_hg19_v1_chr10_-_105212068 BC000039	1083	-	TSC_hg19_v1_chr10_-_105212166 AK022195 NM_015916	1182	-	BC036193 BC036208 NM_001001412	7664	-	BC111040|PDCD11|22984|programmed cell death 11##D80007|PDCD11|22984|programmed cell death 11##BC064486|PDCD11|22984|programmed cell death 11##BC080560|PDCD11|22984|programmed cell death 11##AK294971|PDCD11|22984|programmed cell death 11##AK307418|PDCD11|22984|programmed cell death 11##BC049838|PDCD11|22984|programmed cell death 11##NM_014976|PDCD11|22984|programmed cell death 11##AF131810|CALHM2|51063|calcium homeostasis modulator 2##BC000039|CALHM2|51063|calcium homeostasis modulator 2##AK022195|CALHM2|51063|calcium homeostasis modulator 2##NM_015916|CALHM2|51063|calcium homeostasis modulator 2##BC036193|CALHM1|255022|calcium homeostasis modulator 1##BC036208|CALHM1|255022|calcium homeostasis modulator 1##NM_001001412|CALHM1|255022|calcium homeostasis modulator 1	0.0	
chr11	27528072	27528252	reg1030130.p1	3.799	+	TSC_hg19_v1_chr11_-_27494323 AB209743 AF257182 BC033039 NM_018490	-33858	-	AF382034 TSC_hg19_v1_chr11_-_27384763 AY598334 CU678989 AK313358 BC008496 AK308494 NM_030771 NM_080654	-143396	-	NM_003986	-465654	+	AB385247 BC053907 TSC_hg19_v1_chr11_-_27528315 BC009774 AK223156 AL833601 AK002077 NM_018362	150	-	TSC_hg19_v1_chr11_+_27528395 AY054401 AY054402 AY054404 AY513486	227	+	EF689009 EF689010 NM_001143816 NM_170735	153033	-	AB209743|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF257182|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC033039|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##NM_018490|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF382034|CCDC34|91057|coiled-coil domain containing 34##AY598334|CCDC34|91057|coiled-coil domain containing 34##AK313358|CCDC34|91057|coiled-coil domain containing 34##BC008496|CCDC34|91057|coiled-coil domain containing 34##AK308494|CCDC34|91057|coiled-coil domain containing 34##NM_030771|CCDC34|91057|coiled-coil domain containing 34##NM_080654|CCDC34|91057|coiled-coil domain containing 34##NM_003986|BBOX1|8424|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1##BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)##BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)##AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)##AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)##AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)##NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)##AY054401|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY054402|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY054404|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY513486|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##EF689009|BDNF|627|brain-derived neurotrophic factor##EF689010|BDNF|627|brain-derived neurotrophic factor##NM_001143816|BDNF|627|brain-derived neurotrophic factor##NM_170735|BDNF|627|brain-derived neurotrophic factor	0.0	
chr13	44250571	44250641	reg1036072.p1	3.799	+	BC024178 NM_001127615	-46996	-	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	-652904	+	AF126743 AY248898 NM_013238	-653257	+	TSC_hg19_v1_chr13_-_44361107 BC068521 NM_001242863 NM_017993	110477	-	NM_001128303	202813	+	NM_144974 AK056408	203219	-	BC024178|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001127615|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AF126743|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY248898|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_013238|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC068521|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001242863|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_017993|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122	0.0	
chr16	11286158	11286225	reg1043518.p2	3.799	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-247748	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-249956	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-250025	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	63859	-	X63758 BC096135 BC096136 BC096137 NM_005425	76947	-	NM_021247	81260	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr1	68150857	68150978	reg1033501.p1	3.799	+	TSC_hg19_v1_chr1_+_68150883 AK314991 NM_001199741 NM_001199742 NM_001924 M60974 BC011757 DQ008445 EF581092 EF614238	-7	+	TSC_hg19_v1_chr1_-_67896101 NM_001018067 NM_001018068 NM_001018069 NM_015640	-254800	-	BX647139 TSC_hg19_v1_chr1_-_67896097	-254820	-	TSC_hg19_v1_chr1_+_68151094 AB463698 AM393439 DQ893229 DQ896558	217	+	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	147071	+	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	148193	-	AK314991|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199741|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001199742|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001924|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##M60974|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##BC011757|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ008445|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF581092|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##EF614238|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##NM_001018067|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018068|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_001018069|SERBP1|26135|SERPINE1 mRNA binding protein 1##NM_015640|SERBP1|26135|SERPINE1 mRNA binding protein 1##BX647139|SERBP1|26135|SERPINE1 mRNA binding protein 1##AM393439|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ893229|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ896558|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##AK124028|LOC100289178|100289178|uncharacterized LOC100289178##AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12	0.0	
chr18	9474975	9475155	reg1038236.p1	3.799	+	TSC_hg19_v1_chr18_+_9334831 BC020490 AK315751	-140208	+	TSC_hg19_v1_chr18_+_9334800 AK027629 AK075550 NM_020648 AF196834 AJ297391	-140275	+	AY533564 NM_001204056	-337505	+	TSC_hg19_v1_chr18_+_9475545 NM_006788 BC013126	532	+	TSC_hg19_v1_chr18_-_9614547 AF200478 AK293869 AK292538	139439	-	AK027064 TSC_hg19_v1_chr18_-_9614566 BC060829 AK315106 AF111106 NM_001042388 NM_005134	139512	-	BC020490|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK315751|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK027629|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK075550|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##NM_020648|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AF196834|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AJ297391|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AY533564|ANKRD12|23253|ankyrin repeat domain 12##NM_001204056|ANKRD12|23253|ankyrin repeat domain 12##NM_006788|RALBP1|10928|ralA binding protein 1##BC013126|RALBP1|10928|ralA binding protein 1##AF200478|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK293869|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK292538|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK027064|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##BC060829|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK315106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF111106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_001042388|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_005134|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1	0.0	
chr20	57022761	57022942	reg1008922.p1	3.799	+	AK124571 TSC_hg19_v1_chr20_+_57022525	-359	+	TSC_hg19_v1_chr20_+_56964291 BC001712 AF086628 AF086629 AK298036 AK127252 AB529043 CU674842 BT009811	-58397	+	TSC_hg19_v1_chr20_+_56964286 NM_001195677 NM_004738 AK023241 AY358464	-58627	+	BC101758 BC101760 AK074647 NM_153360 AK293299	67047	-	TSC_hg19_v1_chr20_+_57226338 AK316547 NM_001001433 NM_001134772 NM_001134773 NM_001204868 NM_003763 AK304867 AB209296	203537	+	TSC_hg19_v1_chr20_+_57226873 BC019042 AF008935 AF008936 AF008937 BC073876 AF038897 AF428146 AK026970	204140	+	AK124571|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BC001712|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086628|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086629|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK298036|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK127252|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BT009811|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##NM_001195677|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##NM_004738|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK023241|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AY358464|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BC101758|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##BC101760|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK074647|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##NM_153360|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK293299|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK316547|STX16|8675|syntaxin 16##NM_001001433|STX16|8675|syntaxin 16##NM_001134772|STX16|8675|syntaxin 16##NM_001134773|STX16|8675|syntaxin 16##NM_001204868|STX16|8675|syntaxin 16##NM_003763|STX16|8675|syntaxin 16##AK304867|STX16|8675|syntaxin 16##AB209296|STX16-NPEPL1|100534593|STX16-NPEPL1 readthrough (non-protein coding)##BC019042|STX16|8675|syntaxin 16##AF008935|STX16|8675|syntaxin 16##AF008936|STX16|8675|syntaxin 16##AF008937|STX16|8675|syntaxin 16##BC073876|STX16|8675|syntaxin 16##AF038897|STX16|8675|syntaxin 16##AF428146|STX16|8675|syntaxin 16##AK026970|STX16|8675|syntaxin 16	0.0	
chr7	21373768	21373844	reg1033305.p2	3.799	+	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	-547272	-	TSC_hg19_v1_chr7_-_20826429 AK299947	-547378	-	TSC_hg19_v1_chr7_-_20825382 AB464710	-548424	-	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	94013	+	AB591008 TSC_hg19_v1_chr7_+_21468356	94518	+	AJ320497 NM_003777	209026	+	AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor##AK299947|SP8|221833|Sp8 transcription factor##AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11	0.0	
chr7	24935768	24935890	reg1028228.p1	3.799	+	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-138232	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-138490	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	-138762	-	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	83915	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	229048	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	229111	-	NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic	0.0	
chr7	5271702	5271793	reg1030810.p2	3.799	+	BC016912 AF151808 NM_001033520 AY691426	-17855	+	TSC_hg19_v1_chr7_+_5229923 AB463348 AM392901 AM393618 AM393628 CU675721 AY691425 CR533530	-41762	+	TSC_hg19_v1_chr7_+_5229917 BC021012 BC021068	-41832	+	TSC_hg19_v1_chr7_+_5322595 AY485959 NM_001040661 NM_153247 AK092242 AX747426 AK296278 BC047592 BC025325	50859	+	TSC_hg19_v1_chr7_-_5460842 BC140723	189159	-	AY129022 TSC_hg19_v1_chr7_-_5461555	189794	-	BC016912|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AF151808|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##NM_001033520|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY691426|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM392901|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM393618|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AM393628|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY691425|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##CR533530|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021012|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##BC021068|WIPI2|26100|WD repeat domain, phosphoinositide interacting 2##AY485959|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##NM_001040661|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##NM_153247|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AK092242|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AK296278|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC047592|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##BC025325|SLC29A4|222962|solute carrier family 29 (nucleoside transporters), member 4##AY129022|TNRC18|84629|trinucleotide repeat containing 18	0.0	
chr7	92443004	92443080	reg1039428.p2	3.799	+	TSC_hg19_v1_chr7_-_92219705 BC079834 BC090868 BC057771 AK125498 AL833918 BC017874 NM_001040057 NM_152789 BC062706	-223344	-	TSC_hg19_v1_chr7_-_92219660 BC032461 BC157872	-223400	-	BC104865 BC104867 BC143576 NM_032120 CR933641 BC044570 AL136619 BC020919 BC033561 CR936726 AK294626 AK294812 AF161422 BC065716 CR533549	-284936	+	AB528631 CU690894 X66365 TSC_hg19_v1_chr7_-_92462894	19725	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	20178	-	AK313491 TSC_hg19_v1_chr7_-_92465884	22856	-	BC090868|FAM133B|257415|family with sequence similarity 133, member B##BC057771|FAM133B|257415|family with sequence similarity 133, member B##AK125498|FAM133B|257415|family with sequence similarity 133, member B##AL833918|FAM133B|257415|family with sequence similarity 133, member B##BC017874|FAM133B|257415|family with sequence similarity 133, member B##NM_001040057|FAM133B|257415|family with sequence similarity 133, member B##NM_152789|FAM133B|257415|family with sequence similarity 133, member B##BC062706|FAM133B|257415|family with sequence similarity 133, member B##BC032461|FAM133B|257415|family with sequence similarity 133, member B##BC157872|FAM133B|257415|family with sequence similarity 133, member B##BC104865|RBM48|84060|RNA binding motif protein 48##BC104867|RBM48|84060|RNA binding motif protein 48##BC143576|RBM48|84060|RNA binding motif protein 48##NM_032120|RBM48|84060|RNA binding motif protein 48##CR933641|RBM48|84060|RNA binding motif protein 48##BC044570|RBM48|84060|RNA binding motif protein 48##AL136619|RBM48|84060|RNA binding motif protein 48##BC020919|RBM48|84060|RNA binding motif protein 48##BC033561|RBM48|84060|RNA binding motif protein 48##CR936726|RBM48|84060|RNA binding motif protein 48##AK294626|RBM48|84060|RNA binding motif protein 48##AK294812|RBM48|84060|RNA binding motif protein 48##AF161422|RBM48|84060|RNA binding motif protein 48##BC065716|RBM48|84060|RNA binding motif protein 48##CR533549|RBM48|84060|RNA binding motif protein 48##X66365|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6	0.0	
chr12	112820609	112820675	reg1037231.p2	3.798	+	TSC_hg19_v1_chr12_-_112819755 NM_001109662	-817	-	TSC_hg19_v1_chr12_-_112630525 AF174498	-190114	-	TSC_hg19_v1_chr12_+_112563363 AK122620 AK291331 AK295474 AB007447	-257251	+	TSC_hg19_v1_chr12_-_112847411 BC022444 X69391 BC004138 BC104824 BC104826 AK308680 NM_000970 NM_001024662	26763	-	NM_002834 TSC_hg19_v1_chr12_+_112856698	35974	+	TSC_hg19_v1_chr12_+_112856714 BC008692 L08807	36085	+	NM_001109662|C12orf51|283450|chromosome 12 open reading frame 51##AF174498|C12orf51|283450|chromosome 12 open reading frame 51##AK122620|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK291331|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK295474|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AB007447|TRAFD1|10906|TRAF-type zinc finger domain containing 1##BC022444|RPL6|6128|ribosomal protein L6##X69391|RPL6|6128|ribosomal protein L6##BC004138|RPL6|6128|ribosomal protein L6##BC104824|RPL6|6128|ribosomal protein L6##BC104826|RPL6|6128|ribosomal protein L6##NM_000970|RPL6|6128|ribosomal protein L6##NM_001024662|RPL6|6128|ribosomal protein L6##NM_002834|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##BC008692|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##L08807|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11	0.0	
chr12	829318	829434	reg1031524.p1	3.798	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-56661	-	TSC_hg19_v1_chr12_-_752800 AK298043	-76557	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-77198	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	32780	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	33380	+	BC013629 TSC_hg19_v1_chr12_+_1017145	187706	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr13	54353201	54353279	reg1037044.p2	3.798	+	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	-750328	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	-930465	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-1039278	-	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3361876	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3368446	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	3375019	+	AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	0.0	
chr14	101129719	101129899	reg1041555.p1	3.798	+	BC002607 NM_020836	-93679	-	AB527893 CU678064 EU832622 EU832695 NM_001159531	-95476	-	TSC_hg19_v1_chr14_+_100842812 NM_001161476 BX248767 AK291960 NM_024515 BC067872 AY295082	-286971	+	TSC_hg19_v1_chr14_+_101193228 NM_003836 AK289384 AK297918 AK313258 BC007741 BC014015	63414	+	TSC_hg19_v1_chr14_+_101193275 BC013197	63471	+	TSC_hg19_v1_chr14_+_101193330 CU675787 DQ017081 DQ126100 DQ138965 Z12172	63550	+	BC002607|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_020836|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832622|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##EU832695|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001159531|BEGAIN|57596|brain-enriched guanylate kinase-associated homolog (rat)##NM_001161476|WDR25|79446|WD repeat domain 25##BX248767|WDR25|79446|WD repeat domain 25##AK291960|WDR25|79446|WD repeat domain 25##NM_024515|WDR25|79446|WD repeat domain 25##BC067872|WDR25|79446|WD repeat domain 25##AY295082|WDR25|79446|WD repeat domain 25##NM_003836|DLK1|8788|delta-like 1 homolog (Drosophila)##AK289384|DLK1|8788|delta-like 1 homolog (Drosophila)##AK297918|DLK1|8788|delta-like 1 homolog (Drosophila)##AK313258|DLK1|8788|delta-like 1 homolog (Drosophila)##BC007741|DLK1|8788|delta-like 1 homolog (Drosophila)##BC014015|DLK1|8788|delta-like 1 homolog (Drosophila)##BC013197|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ017081|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ126100|DLK1|8788|delta-like 1 homolog (Drosophila)##DQ138965|DLK1|8788|delta-like 1 homolog (Drosophila)##Z12172|DLK1|8788|delta-like 1 homolog (Drosophila)	0.0	
chr1	78445150	78445274	reg1029770.p2	3.798	+	TSC_hg19_v1_chr1_+_78444987 AK297985	-240	+	TSC_hg19_v1_chr1_-_78444772 NM_003902	-437	-	DQ895919 EU176379 U05040 TSC_hg19_v1_chr1_-_78444757 BC010083 BC017247 AK300032 AK301581 AK303568	-486	-	TSC_hg19_v1_chr1_+_78470622 U40992 AK313205 AB209922 BC034721 NM_007034	25402	+	BC036075 NM_017655 TSC_hg19_v1_chr1_+_78511713	66451	+	TSC_hg19_v1_chr1_+_78511749 AK225941 AB073737 AB528004 CU690284	66550	+	AK297985|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1##DQ895919|FUBP1|8880|far upstream element (FUSE) binding protein 1##EU176379|FUBP1|8880|far upstream element (FUSE) binding protein 1##U05040|FUBP1|8880|far upstream element (FUSE) binding protein 1##BC010083|FUBP1|8880|far upstream element (FUSE) binding protein 1##BC017247|FUBP1|8880|far upstream element (FUSE) binding protein 1##AK300032|FUBP1|8880|far upstream element (FUSE) binding protein 1##AK301581|FUBP1|8880|far upstream element (FUSE) binding protein 1##AK303568|FUBP1|8880|far upstream element (FUSE) binding protein 1##U40992|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##AK313205|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##AB209922|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##BC034721|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##NM_007034|DNAJB4|11080|DnaJ (Hsp40) homolog, subfamily B, member 4##BC036075|GIPC2|54810|GIPC PDZ domain containing family, member 2##NM_017655|GIPC2|54810|GIPC PDZ domain containing family, member 2##AK225941|GIPC2|54810|GIPC PDZ domain containing family, member 2##AB073737|GIPC2|54810|GIPC PDZ domain containing family, member 2	0.011529	
chr19	14474263	14474440	reg1036454.p1	3.798	+	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	-157303	-	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	-213551	-	TSC_hg19_v1_chr19_+_14247979 BX537706	-226360	+	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	17698	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	17904	+	TSC_hg19_v1_chr19_-_14529877 AK301847	55538	-	AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule##AK301847|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A	0.0	
chr1	93003659	93003770	reg1032485.p1	3.798	+	U67369 NM_005263 TSC_hg19_v1_chr1_-_92952458	-51264	-	BC032751 TSC_hg19_v1_chr1_-_92951630 NM_001127216	-52099	-	TSC_hg19_v1_chr1_-_92949508 AK123009	-54182	-	AB449875 AB587441 AF008915 AF042345 NM_005665	254241	-	TSC_hg19_v1_chr1_+_93297596 NM_000969 AK092963 AK095815 AK314720 AB055762	293850	+	TSC_hg19_v1_chr1_+_93297612 BC109370	293891	+	U67369|GFI1|2672|growth factor independent 1 transcription repressor##NM_005263|GFI1|2672|growth factor independent 1 transcription repressor##BC032751|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127216|GFI1|2672|growth factor independent 1 transcription repressor##AK123009|GFI1|2672|growth factor independent 1 transcription repressor##AB449875|EVI5|7813|ecotropic viral integration site 5##AF008915|EVI5|7813|ecotropic viral integration site 5##NM_005665|EVI5|7813|ecotropic viral integration site 5##NM_000969|RPL5|6125|ribosomal protein L5##AK092963|RPL5|6125|ribosomal protein L5##AK095815|RPL5|6125|ribosomal protein L5##AK314720|RPL5|6125|ribosomal protein L5##AB055762|RPL5|6125|ribosomal protein L5##BC109370|RPL5|6125|ribosomal protein L5	0.0	
chr2	131451242	131451322	reg1031131.p1	3.798	+	CU686866 AF312769 BC074825 BC074826 BC069508 BC110080 BC146897 NM_032545 AK290094 AK315326 NM_001079530	-94228	-	NM_001079530 AK315326 AK290094 NM_032545 BC146897 BC110080 BC069508 BC074825 BC074826 AF312769	-172444	+	NM_001142370 NM_014369 TSC_hg19_v1_chr2_+_131113598 BC031076 BC024280 BC041562 BC052800 X79568 AK303804 CU690934	-337632	+	BC105013 BC105041 NM_207364 AY569570 AY280965	35401	+	AK289525 NM_152698 AK095696 AK291424 BC113445 BC113447 BC143806 NM_001105193	61833	+	TSC_hg19_v1_chr2_+_131513793 NM_001105194 NM_001105195	62540	+	AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_001142370|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##NM_014369|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC031076|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC024280|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC041562|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC052800|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##X79568|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##AK303804|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC105013|GPR148|344561|G protein-coupled receptor 148##BC105041|GPR148|344561|G protein-coupled receptor 148##NM_207364|GPR148|344561|G protein-coupled receptor 148##AY569570|GPR148|344561|G protein-coupled receptor 148##AY280965|GPR148|344561|G protein-coupled receptor 148##AK289525|FAM123C|205147|family with sequence similarity 123C##NM_152698|FAM123C|205147|family with sequence similarity 123C##AK095696|FAM123C|205147|family with sequence similarity 123C##AK291424|FAM123C|205147|family with sequence similarity 123C##BC113445|FAM123C|205147|family with sequence similarity 123C##BC113447|FAM123C|205147|family with sequence similarity 123C##BC143806|FAM123C|205147|family with sequence similarity 123C##NM_001105193|FAM123C|205147|family with sequence similarity 123C##NM_001105194|FAM123C|205147|family with sequence similarity 123C##NM_001105195|FAM123C|205147|family with sequence similarity 123C	0.554914	CTCF.p2:-5:0.555
chr2	202663767	202663862	reg1037584.p1	3.798	+	NM_001135745 NM_020919	-17920	-	TSC_hg19_v1_chr2_-_202645657 BC071576 AB053305 AB053306 AF391100 AK023024 BC029174 AK291029	-18149	-	AK090992 TSC_hg19_v1_chr2_-_202645631	-18202	-	AB053308 AX772791 NM_139158 AK131512 BX647394 BC038807 EU831752 EU831828	7478	+	AB017365 NM_003507 AB010881 BC015915 CU677505	235525	+	X99586 TSC_hg19_v1_chr2_-_203103288 U38784 U67122 BC053528 AK311840 BC005899 AB062294 BC066306 BC006462 U83117 U61397 NM_001005781 NM_001005782 NM_003352	439454	-	NM_001135745|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##NM_020919|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##BC071576|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053305|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053306|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AF391100|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AK023024|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##BC029174|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AK291029|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053308|CDK15|65061|cyclin-dependent kinase 15##AX772791|CDK15|65061|cyclin-dependent kinase 15##NM_139158|CDK15|65061|cyclin-dependent kinase 15##AK131512|CDK15|65061|cyclin-dependent kinase 15##BX647394|CDK15|65061|cyclin-dependent kinase 15##BC038807|CDK15|65061|cyclin-dependent kinase 15##EU831752|CDK15|65061|cyclin-dependent kinase 15##EU831828|CDK15|65061|cyclin-dependent kinase 15##AB017365|FZD7|8324|frizzled family receptor 7##NM_003507|FZD7|8324|frizzled family receptor 7##AB010881|FZD7|8324|frizzled family receptor 7##BC015915|FZD7|8324|frizzled family receptor 7##X99586|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U38784|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U67122|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC053528|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK311840|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC005899|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AB062294|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC066306|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC006462|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U83117|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U61397|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005781|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005782|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_003352|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)	0.0	
chr3	123271068	123271198	reg1033301.p1	3.798	+	AB527359 NM_183357	-103742	-	AK303070 NM_001199642	-135945	-	NM_012430 TSC_hg19_v1_chr3_+_122920787 AK315771 AF100749	-350343	+	TSC_hg19_v1_chr3_-_123303927 CU687458 AK289983 NM_198402 AK125375 BC060839 AY191814 BC049369	32800	-	BC113458 BC113456 BC100761 BC100762 BC100763 AF096773 AF096774 AF096775 AK314412 TSC_hg19_v1_chr3_-_123339352 BC017811 BC107783 Y09530 BC064420 AK314443	68151	-	TSC_hg19_v1_chr3_-_123339426 NM_053031 NM_053032	68343	-	NM_183357|ADCY5|111|adenylate cyclase 5##AK303070|ADCY5|111|adenylate cyclase 5##NM_001199642|ADCY5|111|adenylate cyclase 5##NM_012430|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK315771|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AF100749|SEC22A|26984|SEC22 vesicle trafficking protein homolog A (S. cerevisiae)##AK289983|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##NM_198402|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC060839|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##AY191814|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC049369|PTPLB|201562|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b##BC113458|MYLK|4638|myosin light chain kinase##BC113456|MYLK|4638|myosin light chain kinase##BC100761|MYLK|4638|myosin light chain kinase##BC100762|MYLK|4638|myosin light chain kinase##BC100763|MYLK|4638|myosin light chain kinase##AF096773|MYLK|4638|myosin light chain kinase##AF096774|MYLK|4638|myosin light chain kinase##AF096775|MYLK|4638|myosin light chain kinase##AK314412|MYLK|4638|myosin light chain kinase##BC017811|MYLK|4638|myosin light chain kinase##BC107783|MYLK|4638|myosin light chain kinase##Y09530|MYLK|4638|myosin light chain kinase##BC064420|MYLK|4638|myosin light chain kinase##AK314443|MYLK|4638|myosin light chain kinase##NM_053031|MYLK|4638|myosin light chain kinase##NM_053032|MYLK|4638|myosin light chain kinase	0.806174	CTCF.p2:14:0.806
chr3	189004361	189004541	reg1039271.p2	3.798	+	AK125682 NM_198485 BC101550 BC101552	-114640	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-339481	+	NM_001167671 BC130584 BC144076	-1061217	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	344808	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	503067	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	834244	-	AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1	0.0	
chr4	163692377	163692498	reg1033351.p2	3.798	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	-607286	-	AK294459 NM_014247	-3503440	+	AK058100 NM_152543	-3736105	-	TSC_hg19_v1_chr4_-_164088002 AK097352	395555	-	TSC_hg19_v1_chr4_-_164088043 AK308601	395600	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	395641	-	AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.519973	CTCF.p2:-1:0.520
chr4	47147829	47147975	reg1031776.p2	3.798	+	NM_000812 AK296023	-114555	+	AK090780 NM_000809	-151479	-	CU690038 DQ891679 DQ894864 EU176605 U30461 NM_001204266 NM_001204267 BC035055	-152406	-	TSC_hg19_v1_chr4_-_47465683 AY542163 BC015145 NM_017845 AK000509 BC019826 AF182421	317777	-	TSC_hg19_v1_chr4_-_47465720 BC008371	317826	-	TSC_hg19_v1_chr4_+_47487301 BC057839 BC108723 AJ441078 NM_020453 BC131535	339428	+	NM_000812|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1##AK296023|GABRB1|2560|gamma-aminobutyric acid (GABA) A receptor, beta 1##AK090780|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_000809|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ891679|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##DQ894864|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##EU176605|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##U30461|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204266|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##NM_001204267|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##BC035055|GABRA4|2557|gamma-aminobutyric acid (GABA) A receptor, alpha 4##AY542163|COMMD8|54951|COMM domain containing 8##BC015145|COMMD8|54951|COMM domain containing 8##NM_017845|COMMD8|54951|COMM domain containing 8##AK000509|COMMD8|54951|COMM domain containing 8##BC019826|COMMD8|54951|COMM domain containing 8##AF182421|COMMD8|54951|COMM domain containing 8##BC008371|COMMD8|54951|COMM domain containing 8##BC057839|ATP10D|57205|ATPase, class V, type 10D##AJ441078|ATP10D|57205|ATPase, class V, type 10D##NM_020453|ATP10D|57205|ATPase, class V, type 10D##BC131535|ATP10D|57205|ATPase, class V, type 10D	0.0	
chr6	157012302	157012427	reg1034416.p1	3.798	+	AF190122 NM_015718	-1235328	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1376741	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1376779	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	86699	+	TSC_hg19_v1_chr6_+_157099206 AB587572	86861	+	TSC_hg19_v1_chr6_+_157099283 AF521671	86920	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.0	
chr6	45798490	45798595	reg1037894.p2	3.798	+	TSC_hg19_v1_chr6_+_45390379 L40992	-408130	+	TSC_hg19_v1_chr6_+_45390325 BC108919 BC108920	-408237	+	TSC_hg19_v1_chr6_+_45389825 NM_004348	-408677	+	DQ892643 DQ895881 CU690236 AF176920 AK314416 AK075163 TSC_hg19_v1_chr6_-_45983598 AK075144 AF216941 AK222544 BC035968 DQ679794 AK223130 NM_016929	184935	-	AY032602 AK097048 NM_001114086	249489	-	NM_014936 TSC_hg19_v1_chr6_+_46097726 BC018054	299172	+	L40992|RUNX2|860|runt-related transcription factor 2##BC108919|RUNX2|860|runt-related transcription factor 2##BC108920|RUNX2|860|runt-related transcription factor 2##NM_004348|RUNX2|860|runt-related transcription factor 2##DQ892643|CLIC5|53405|chloride intracellular channel 5##DQ895881|CLIC5|53405|chloride intracellular channel 5##AF176920|CLIC5|53405|chloride intracellular channel 5##AK314416|CLIC5|53405|chloride intracellular channel 5##AK075163|CLIC5|53405|chloride intracellular channel 5##AK075144|CLIC5|53405|chloride intracellular channel 5##AF216941|CLIC5|53405|chloride intracellular channel 5##AK222544|CLIC5|53405|chloride intracellular channel 5##BC035968|CLIC5|53405|chloride intracellular channel 5##DQ679794|CLIC5|53405|chloride intracellular channel 5##AK223130|CLIC5|53405|chloride intracellular channel 5##NM_016929|CLIC5|53405|chloride intracellular channel 5##AY032602|CLIC5|53405|chloride intracellular channel 5##AK097048|CLIC5|53405|chloride intracellular channel 5##NM_001114086|CLIC5|53405|chloride intracellular channel 5##NM_014936|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##BC018054|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)	0.0	
chr7	139467312	139467402	reg1027033.p1	3.798	+	NM_001080511	-258684	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-298925	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-422343	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	10548	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	10682	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	61735	+	NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.042853	
chr7	25891238	25891348	reg1010036.p1	3.798	+	AB040290 AF330057 AF440392 NM_022150	-623213	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-671422	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-726353	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	300640	+	TSC_hg19_v1_chr7_-_26232151 BX538099	340858	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	349048	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.0	
chr8	76061380	76061507	reg1041139.p1	3.798	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-164534	+	CR749657 NM_015886	-324672	+	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	-798753	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	258745	+	BX571750 NM_004133 EU832451 HQ692842	390771	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	1532067	+	NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15##AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4	0.992338	CTCF.p2:-3:0.992
chr10	52384266	52384390	reg1033900.p2	3.797	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	-625	-	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-375988	-	NM_018232	-546443	+	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	115382	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	261065	-	TSC_hg19_v1_chr10_-_52645440 BC054873 AK000324 NM_001198818 NM_001198819 NM_001198820 NM_014576 NM_138932 NM_138933	261107	-	AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor##BC054873|A1CF|29974|APOBEC1 complementation factor##AK000324|A1CF|29974|APOBEC1 complementation factor##NM_001198818|A1CF|29974|APOBEC1 complementation factor##NM_001198819|A1CF|29974|APOBEC1 complementation factor##NM_001198820|A1CF|29974|APOBEC1 complementation factor##NM_014576|A1CF|29974|APOBEC1 complementation factor##NM_138932|A1CF|29974|APOBEC1 complementation factor##NM_138933|A1CF|29974|APOBEC1 complementation factor	0.0	
chr10	7861194	7861294	reg1035673.p1	3.797	+	AJ292190 NM_031923 AL117661	-536	+	TSC_hg19_v1_chr10_+_7860467 BC105593 BC073884 BC017320 BC045106 AK307657 AK307521 BC062352 BC028077	-768	+	TSC_hg19_v1_chr10_+_7830141 NM_001001973 NM_005174 BC000931 BC020824 AK292896 AK296803 D16562 D16563 BC016812 AK294061 BC010380 BC000470 BC013394 BC013865 CU677727 CR457403 BC026049	-31104	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	235405	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	235531	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	236239	+	AJ292190|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##NM_031923|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##AL117661|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC105593|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC073884|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC017320|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC045106|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##AK307657|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##AK307521|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC062352|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##BC028077|TAF3|83860|TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa##NM_001001973|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##NM_005174|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC000931|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC020824|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##AK292896|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##AK296803|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##D16562|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##D16563|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC016812|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##AK294061|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC010380|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC000470|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC013394|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC013865|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##CR457403|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC026049|ATP5C1|509|ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3	0.0	
chr10	87938303	87938401	reg1039761.p1	3.797	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-1753657	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-1806734	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-1849958	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	187911	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	343142	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	343178	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.071181	
chr11	129716877	129717044	reg1028408.p1	3.797	+	TSC_hg19_v1_chr11_+_129685744 AK098106 NM_138788 AK290283 AK292058	-31216	+	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	-471079	+	EF127492 NM_001142685	-654868	-	NM_006165 X80878	45943	-	TSC_hg19_v1_chr11_-_129765453 BC063280	48482	-	TSC_hg19_v1_chr11_-_129765469 AK299794	48510	-	AK098106|TMEM45B|120224|transmembrane protein 45B##NM_138788|TMEM45B|120224|transmembrane protein 45B##AK290283|TMEM45B|120224|transmembrane protein 45B##AK292058|TMEM45B|120224|transmembrane protein 45B##AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2##EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##NM_006165|NFRKB|4798|nuclear factor related to kappaB binding protein##X80878|NFRKB|4798|nuclear factor related to kappaB binding protein##BC063280|NFRKB|4798|nuclear factor related to kappaB binding protein	0.0	
chr11	68041278	68041388	reg1035838.p2	3.797	+	TSC_hg19_v1_chr11_-_68039453 NM_022338	-1875	-	TSC_hg19_v1_chr11_-_68039418 AF264781	-1947	-	TSC_hg19_v1_chr11_-_67981112 AF264782 BC002522 BC065287 BC087834 NM_016028 NM_017635 BC108304 AK314336 AK299201	-60354	-	TSC_hg19_v1_chr11_+_68080058 AB017498 NM_002335 AF077820 AF064548 BC150595 BC098397	38756	+	AF088027 TSC_hg19_v1_chr11_+_68115450	74103	+	TSC_hg19_v1_chr11_+_68228219 NM_001164160 NM_001164161 NM_001164162 NM_001164163 NM_001164164 NM_018312 BC070121 AK298180 AK303315 AK315136 CR936718 CR749815 CR933658 AB046778	186876	+	NM_022338|C11orf24|53838|chromosome 11 open reading frame 24##AF264781|C11orf24|53838|chromosome 11 open reading frame 24##AF264782|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC002522|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC065287|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC087834|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_016028|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_017635|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC108304|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK314336|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK299201|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AB017498|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_002335|LRP5|4041|low density lipoprotein receptor-related protein 5##AF077820|LRP5|4041|low density lipoprotein receptor-related protein 5##AF064548|LRP5|4041|low density lipoprotein receptor-related protein 5##BC150595|LRP5|4041|low density lipoprotein receptor-related protein 5##BC098397|LRP5|4041|low density lipoprotein receptor-related protein 5##AF088027|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_001164160|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164161|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164162|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164163|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_001164164|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##NM_018312|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##BC070121|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK298180|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK303315|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AK315136|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR936718|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR749815|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##CR933658|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3##AB046778|PPP6R3|55291|protein phosphatase 6, regulatory subunit 3	0.021303	
chr13	28056015	28056168	reg1040211.p1	3.797	+	AF265440 TSC_hg19_v1_chr13_-_28024702 BC046166 NM_001166263 NM_152912	-31369	-	TSC_hg19_v1_chr13_-_28024327 BC039599 NM_001166262 NM_001166261	-31782	-	BC143711 D32257 NM_002097 TSC_hg19_v1_chr13_+_27998761 AB590496 U14134 U20272	-57320	+	BC036755 TSC_hg19_v1_chr13_-_28194667	138513	-	TSC_hg19_v1_chr13_-_28194723 AK313394 NM_153371	138636	-	TSC_hg19_v1_chr13_+_28194948 NM_001206559 AK307356	138874	+	BC046166|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166263|MTIF3|219402|mitochondrial translational initiation factor 3##NM_152912|MTIF3|219402|mitochondrial translational initiation factor 3##BC039599|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166262|MTIF3|219402|mitochondrial translational initiation factor 3##NM_001166261|MTIF3|219402|mitochondrial translational initiation factor 3##BC143711|GTF3A|2971|general transcription factor IIIA##D32257|GTF3A|2971|general transcription factor IIIA##NM_002097|GTF3A|2971|general transcription factor IIIA##U14134|GTF3A|2971|general transcription factor IIIA##U20272|GTF3A|2971|general transcription factor IIIA##BC036755|LNX2|222484|ligand of numb-protein X 2##AK313394|LNX2|222484|ligand of numb-protein X 2##NM_153371|LNX2|222484|ligand of numb-protein X 2##NM_001206559|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa##AK307356|POLR1D|51082|polymerase (RNA) I polypeptide D, 16kDa	0.132802	
chr1	36010549	36010729	reg1007259.p1	3.797	+	TSC_hg19_v1_chr1_-_35920081 AK090878	-90481	-	BX648067 TSC_hg19_v1_chr1_+_35851133	-159522	+	TSC_hg19_v1_chr1_+_35734624 BC127113 BC127114 AB587559	-276011	+	TSC_hg19_v1_chr1_-_36022989 BC014530 AF275679 AK314605 AY163234	12330	-	AK316252 TSC_hg19_v1_chr1_-_36023002	12364	-	TSC_hg19_v1_chr1_-_36023005 NM_024874	12392	-	AK090878|KIAA0319L|79932|KIAA0319-like##BX648067|ZMYM4|9202|zinc finger, MYM-type 4##BC127113|ZMYM4|9202|zinc finger, MYM-type 4##BC127114|ZMYM4|9202|zinc finger, MYM-type 4##BC014530|KIAA0319L|79932|KIAA0319-like##AF275679|KIAA0319L|79932|KIAA0319-like##AK314605|KIAA0319L|79932|KIAA0319-like##AY163234|KIAA0319L|79932|KIAA0319-like##AK316252|KIAA0319L|79932|KIAA0319-like##NM_024874|KIAA0319L|79932|KIAA0319-like	0.0	
chr1	45769585	45769652	reg1018744.p1	3.797	+	TSC_hg19_v1_chr1_+_45769564 BC035497	-43	+	TSC_hg19_v1_chr1_-_45672278 AB040944 NM_020883	-97367	-	TSC_hg19_v1_chr1_+_45478442 AK293702	-291167	+	NM_032756 BC007293	22942	+	AY169960 NM_025077 TSC_hg19_v1_chr1_+_45805393	35767	+	TSC_hg19_v1_chr1_+_45805740 AK293704	36102	+	BC035497|LOC400752|400752|uncharacterized LOC400752##AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5##NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5##AK293702|UROD|7389|uroporphyrinogen decarboxylase##NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##AY169960|TOE1|114034|target of EGR1, member 1 (nuclear)##NM_025077|TOE1|114034|target of EGR1, member 1 (nuclear)##AK293704|TOE1|114034|target of EGR1, member 1 (nuclear)	0.0	
chr15	32392592	32392672	reg1037056.p1	3.797	+	AK294229 NM_000746 NM_001190455 X70297 AK292069 AK309709 U62436 EF405802 EF405814 BC037571 EF405812 EF405813 AJ586911 AF385585 U40583 Y08420	-69889	+	TSC_hg19_v1_chr15_-_32162898 AK126002	-229689	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	-229803	-	D87717 NM_014783 NM_199357 TSC_hg19_v1_chr15_+_32907726 BC050545 BC063444 AK303025 BC039563	515130	+	NM_001144757 NM_003020 AK314965 BC093053 BC005349 Y00757	541282	+	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	617625	+	AK294229|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_000746|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##NM_001190455|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##X70297|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK292069|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U62436|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405802|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405814|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##BC037571|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405812|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##EF405813|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AJ586911|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AF385585|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##U40583|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##Y08420|CHRNA7|1139|cholinergic receptor, nicotinic, alpha 7##AK126002|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##D87717|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_014783|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_199357|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC050545|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC063444|ARHGAP11A|9824|Rho GTPase activating protein 11A##AK303025|ARHGAP11A|9824|Rho GTPase activating protein 11A##BC039563|ARHGAP11A|9824|Rho GTPase activating protein 11A##NM_001144757|SCG5|6447|secretogranin V (7B2 protein)##NM_003020|SCG5|6447|secretogranin V (7B2 protein)##AK314965|SCG5|6447|secretogranin V (7B2 protein)##BC093053|SCG5|6447|secretogranin V (7B2 protein)##BC005349|SCG5|6447|secretogranin V (7B2 protein)##Y00757|SCG5|6447|secretogranin V (7B2 protein)##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1	0.0	
chr22	21485105	21485218	reg1035460.p1	3.797	+	BC062565 AJ000730 BC008814 NM_004173 TSC_hg19_v1_chr22_-_21386851	-98310	-	BC064805 NM_001159554 AB002058 CR456535 BC109209 AB528202 CU013135 CU013423 AK309079 NM_005446 BC047287 BC063553 BC033488	-115701	+	TSC_hg19_v1_chr22_+_21356508 AK096901 BC065749	-128680	+	NM_001128633	252501	+	NM_001128635	252878	+	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	286515	+	BC062565|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AJ000730|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC008814|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_004173|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC064805|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_001159554|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AB002058|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CR456535|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC109209|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013135|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013423|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK309079|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_005446|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC047287|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC063553|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC033488|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK096901|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##BC065749|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2	0.827011	CTCF.p2:-27:0.827
chr22	39885946	39886123	reg1034915.p1	3.797	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	-2744	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	-32498	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	-32714	+	TSC_hg19_v1_chr22_+_39898257 NM_019008	12231	+	TSC_hg19_v1_chr22_+_39898332 AL834205	12276	+	TSC_hg19_v1_chr22_+_39898363 AL365515	12325	+	NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_019008|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL834205|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL365515|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like	0.0	
chr4	154393956	154394136	reg1037525.p1	3.797	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-6554	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-128171	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-128259	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	211352	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	211384	+	TSC_hg19_v1_chr4_+_154605441 BC033756	211418	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.0	
chr4	94818859	94818958	reg1037884.p2	3.797	+	BC113623 BC113625 BC069145 AB464463 BC069594 BC069604 CU686920 EU446465 HQ258191 NM_005172 BC069578	-68847	+	AB209318 NM_001510 AK308611	-1593316	+	BC051694 NM_207491	-3662727	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	309903	+	TSC_hg19_v1_chr4_+_95129015 NM_001128429 NM_020159 BC045534 AY008271 BC041800	310206	+	TSC_hg19_v1_chr4_-_95263988 BC020734 AK290075 NM_014485	445098	-	BC113623|ATOH1|474|atonal homolog 1 (Drosophila)##BC113625|ATOH1|474|atonal homolog 1 (Drosophila)##BC069145|ATOH1|474|atonal homolog 1 (Drosophila)##BC069594|ATOH1|474|atonal homolog 1 (Drosophila)##BC069604|ATOH1|474|atonal homolog 1 (Drosophila)##EU446465|ATOH1|474|atonal homolog 1 (Drosophila)##HQ258191|ATOH1|474|atonal homolog 1 (Drosophila)##NM_005172|ATOH1|474|atonal homolog 1 (Drosophila)##BC069578|ATOH1|474|atonal homolog 1 (Drosophila)##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase##AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase##NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase	0.950139	CTCF.p2:10:0.950
chr5	142403025	142403141	reg1031163.p1	3.797	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-252775	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-253111	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-325512	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	379740	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	380023	-	BC015610 TSC_hg19_v1_chr5_-_142783214	380128	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.410453	CTCF.p2:-12:0.410
chr12	26424946	26425031	reg1033811.p1	3.796	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-76403	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-76697	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	-147067	-	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	561092	-	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	665921	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	666242	-	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)	0.0	
chr12	77718449	77718609	reg1029577.p1	3.796	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-259240	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-445746	-	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	-560503	+	NM_014903 AJ488201	506603	+	AK094616 NM_001135805	1539243	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	1539946	+	BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17##NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I	0.0	
chr16	19896396	19896577	reg1026828.p2	3.796	+	AK295204 AF202640 TSC_hg19_v1_chr16_-_19896168 BC034467 AF181862 NM_016235 AK294680 AK075119 AK315989 AK296754	-322	-	TSC_hg19_v1_chr16_-_19729532 BC117562 NM_001012991	-166999	-	TSC_hg19_v1_chr16_+_19727698 AF520569 AF520570 AK000122 NM_153208	-168749	+	AB196529 AY635179 BC137237 BC137238 BC144547 NM_001002911 AK291384	188601	-	U36221 AK312277 BX647831 BX648201 BX649067 BX648023 NM_001007240 NM_001007241 NM_001007242 NM_001502 CR749600	442367	-	AK127643 AK055722 AK091961 AK096043 AX747279 M15881 BC035975 AK127648 NM_001008389 NM_003361	467546	-	AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC117562|C16orf88|400506|chromosome 16 open reading frame 88##NM_001012991|C16orf88|400506|chromosome 16 open reading frame 88##AF520569|IQCK|124152|IQ motif containing K##AF520570|IQCK|124152|IQ motif containing K##AK000122|IQCK|124152|IQ motif containing K##NM_153208|IQCK|124152|IQ motif containing K##AB196529|GPR139|124274|G protein-coupled receptor 139##AY635179|GPR139|124274|G protein-coupled receptor 139##BC137237|GPR139|124274|G protein-coupled receptor 139##BC137238|GPR139|124274|G protein-coupled receptor 139##NM_001002911|GPR139|124274|G protein-coupled receptor 139##AK291384|GPR139|124274|G protein-coupled receptor 139##U36221|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK312277|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX647831|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648201|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX649067|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648023|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007240|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007241|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007242|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001502|GP2|2813|glycoprotein 2 (zymogen granule membrane)##CR749600|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK127643|UMOD|7369|uromodulin##AK055722|UMOD|7369|uromodulin##AK091961|UMOD|7369|uromodulin##AK096043|UMOD|7369|uromodulin##M15881|UMOD|7369|uromodulin##BC035975|UMOD|7369|uromodulin##AK127648|UMOD|7369|uromodulin##NM_001008389|UMOD|7369|uromodulin##NM_003361|UMOD|7369|uromodulin	0.0	
chr16	616903	617029	reg1033578.p2	3.796	+	TSC_hg19_v1_chr16_+_610415 BC016613 NM_145270	-6552	+	TSC_hg19_v1_chr16_+_577845 BC112918 NM_005632 U85647 BC032648	-39074	+	TSC_hg19_v1_chr16_+_570732 Z36827 AF038180	-46209	+	AK314361 AK093527 AX748186 BC048340 BC032015 NM_176677	54	+	TSC_hg19_v1_chr16_+_619967 NM_004204	2970	+	TSC_hg19_v1_chr16_+_619980 AB003723 NM_148920 BC006377 AF030177 BC010094	3049	+	BC016613|C16orf11|146325|chromosome 16 open reading frame 11##NM_145270|C16orf11|146325|chromosome 16 open reading frame 11##BC112918|SOLH|6650|small optic lobes homolog (Drosophila)##NM_005632|SOLH|6650|small optic lobes homolog (Drosophila)##U85647|SOLH|6650|small optic lobes homolog (Drosophila)##BC032648|SOLH|6650|small optic lobes homolog (Drosophila)##AK314361|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##AK093527|NHLRC4|283948|NHL repeat containing 4##BC048340|NHLRC4|283948|NHL repeat containing 4##BC032015|NHLRC4|283948|NHL repeat containing 4##NM_176677|NHLRC4|283948|NHL repeat containing 4##NM_004204|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##AB003723|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##NM_148920|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##BC006377|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##AF030177|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q##BC010094|PIGQ|9091|phosphatidylinositol glycan anchor biosynthesis, class Q	0.0	
chr18	29598480	29598653	reg1036492.p1	3.796	+	AK000463 AK225518 NM_017831	-122	+	TSC_hg19_v1_chr18_-_29523092 NM_014939 AL136749	-75458	-	TSC_hg19_v1_chr18_-_29523064 BC059380 AK292537	-75499	-	TSC_hg19_v1_chr18_+_29598794 BC012021 CU680164	240	+	NM_016271 TSC_hg19_v1_chr18_+_29671843	73270	+	TSC_hg19_v1_chr18_+_29671959 AK315761 AF162680 BC018107	73484	+	AK000463|RNF125|54941|ring finger protein 125##AK225518|RNF125|54941|ring finger protein 125##NM_017831|RNF125|54941|ring finger protein 125##NM_014939|TRAPPC8|22878|trafficking protein particle complex 8##AL136749|TRAPPC8|22878|trafficking protein particle complex 8##BC059380|TRAPPC8|22878|trafficking protein particle complex 8##AK292537|TRAPPC8|22878|trafficking protein particle complex 8##BC012021|RNF125|54941|ring finger protein 125##NM_016271|RNF138|51444|ring finger protein 138##AK315761|RNF138|51444|ring finger protein 138##AF162680|RNF138|51444|ring finger protein 138##BC018107|RNF138|51444|ring finger protein 138	0.0	
chr19	50391084	50391182	reg1035840.p1	3.796	+	TSC_hg19_v1_chr19_+_50381392 AK090606 AX746531	-9675	+	NM_001168222 NM_024682 TSC_hg19_v1_chr19_+_50380945 BC003516 AK022230 AK300007 AK309412 AB449903 AB590884 CU678472	-10284	+	BC016043 BC007416 AK226004 BC051844 TSC_hg19_v1_chr19_-_50380601 BC015562 NM_032375 AK123687 NM_001098633 NM_001098632	-10586	-	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	9020	-	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	21969	-	NM_012068 AK290592	40855	+	AK090606|TBC1D17|79735|TBC1 domain family, member 17##NM_001168222|TBC1D17|79735|TBC1 domain family, member 17##NM_024682|TBC1D17|79735|TBC1 domain family, member 17##BC003516|TBC1D17|79735|TBC1 domain family, member 17##AK022230|TBC1D17|79735|TBC1 domain family, member 17##AK300007|TBC1D17|79735|TBC1 domain family, member 17##AK309412|TBC1D17|79735|TBC1 domain family, member 17##AB449903|TBC1D17|79735|TBC1 domain family, member 17##BC016043|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC007416|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##AK226004|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC051844|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC015562|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_032375|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##AK123687|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_001098633|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_001098632|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5	0.0	
chr2	37863201	37863381	reg1031500.p3	3.796	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-291478	+	BC030706 BC012820 AB015982 NM_005813	-319098	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-404445	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	35488	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	36098	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	289141	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.0	
chr6	140374022	140374143	reg1036289.p2	3.796	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-678298	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-678321	-	NM_001168389 NM_001168388	-678659	-	BC095542 GU727635 M73482 NM_002511	2035782	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	2094308	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	2094324	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.025066	
chr7	39350322	39350441	reg1033825.p2	3.796	+	NM_001166018 NM_007252	-332773	+	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	-401588	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	-679304	-	TSC_hg19_v1_chr7_+_39606002 AK314937 NM_020192 AK293511 AF226046 BC022043 CR457198 DQ892829 DQ896074 DQ896075	255588	+	TSC_hg19_v1_chr7_+_39663159 NM_005402	312785	+	TSC_hg19_v1_chr7_+_39663204 BC039858	312830	+	NM_001166018|POU6F2|11281|POU class 6 homeobox 2##NM_007252|POU6F2|11281|POU class 6 homeobox 2##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##AK314937|YAE1D1|57002|Yae1 domain containing 1##NM_020192|YAE1D1|57002|Yae1 domain containing 1##AF226046|YAE1D1|57002|Yae1 domain containing 1##BC022043|YAE1D1|57002|Yae1 domain containing 1##CR457198|YAE1D1|57002|Yae1 domain containing 1##DQ892829|YAE1D1|57002|Yae1 domain containing 1##DQ896074|YAE1D1|57002|Yae1 domain containing 1##DQ896075|YAE1D1|57002|Yae1 domain containing 1##NM_005402|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)##BC039858|RALA|5898|v-ral simian leukemia viral oncogene homolog A (ras related)	0.016565	
chr8	7079413	7079566	reg1014587.p1	3.796	+	BC107079 BC069690 NM_021010	-165235	-	BC093791 BC112188 BC069423 M21130 M23281 BC119706 X52053 BC027917 M26602 NM_005217 X13621 NM_001042500 NM_004084	-203690	-	BC093791 BC112188 BC069423 M21130 M26602 NM_001042500 NM_004084	-222789	-	NM_001164452 NM_001164456	34936	+	NM_001164452 NM_001164456	57802	+	NM_001164455	65424	+	BC107079|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC069690|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##NM_021010|DEFA5|1670|defensin, alpha 5, Paneth cell-specific##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M23281|DEFA3|1668|defensin, alpha 3, neutrophil-specific##BC119706|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X52053|DEFA1|1667|defensin, alpha 1##BC027917|DEFA3|1668|defensin, alpha 3, neutrophil-specific##M26602|DEFA1|1667|defensin, alpha 1##NM_005217|DEFA3|1668|defensin, alpha 3, neutrophil-specific##X13621|DEFA3|1668|defensin, alpha 3, neutrophil-specific##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##BC093791|DEFA1|1667|defensin, alpha 1##BC112188|DEFA1|1667|defensin, alpha 1##BC069423|DEFA1|1667|defensin, alpha 1##M21130|DEFA1|1667|defensin, alpha 1##M26602|DEFA1|1667|defensin, alpha 1##NM_001042500|DEFA1B|728358|defensin, alpha 1B##NM_004084|DEFA1|1667|defensin, alpha 1##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164452|FAM90A14|645651|family with sequence similarity 90, member A14##NM_001164456|FAM90A13|441314|family with sequence similarity 90, member A13##NM_001164455|FAM90A5|441315|family with sequence similarity 90, member A5	0.0	
chrX	5376496	5376575	reg1035690.p2	3.796	+	TSC_hg19_v1_chrX_-_3631668 NM_005044	-1744817	-	TSC_hg19_v1_chrX_-_3631645 X85545	-1744890	-	TSC_hg19_v1_chrX_-_3631619 BC041073	-1744993	-	AB033086 AF376803 AX773938 NM_020742	769352	-	AK055471 BC034018 NM_181332	770145	-	AF167078 AF167079 NM_016379	1076623	-	NM_005044|PRKX|5613|protein kinase, X-linked##X85545|PRKX|5613|protein kinase, X-linked##BC041073|PRKX|5613|protein kinase, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A	0.56786	CTCF.p2:0:0.568
chr1	12996270	12996373	reg1029722.p1	3.795	+	BC144565 NM_001012277	-18843	+	NM_001012276 BC140755	-19864	+	BC112208 BC112210 NM_001039361 AL049682	-38228	-	BC101342 NM_001010889	11084	-	NM_001100631 AB464060	39224	+	BC130274 BC130276 BC101344 NM_001013407	121421	-	BC144565|PRAMEF7|441871|PRAME family member 7##NM_001012277|PRAMEF7|441871|PRAME family member 7##NM_001012276|PRAMEF8|391002|PRAME family member 8##BC140755|PRAMEF7|441871|PRAME family member 7##BC112208|PRAMEF10|343071|PRAME family member 10##BC112210|PRAMEF10|343071|PRAME family member 10##NM_001039361|PRAMEF10|343071|PRAME family member 10##AL049682|PRAMEF10|343071|PRAME family member 10##BC101342|PRAMEF6|440561|PRAME family member 6##NM_001010889|PRAMEF6|440561|PRAME family member 6##NM_001100631|PRAMEF22|653606|PRAME family member 22##BC130274|PRAMEF5|343068|PRAME family member 5##BC130276|PRAMEF5|343068|PRAME family member 5##BC101344|PRAMEF5|343068|PRAME family member 5##NM_001013407|PRAMEF5|343068|PRAME family member 5	1.992576	CTCF.p2:-37:0.999	CTCF.p2:42:0.993
chr1	39558058	39558159	reg1014255.p1	3.795	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-11020	+	NM_001184979 NM_004552 TSC_hg19_v1_chr1_+_39492021 AK312188 AF047434 BC093057 AF020352 AF086268 BC001884	-66100	+	TSC_hg19_v1_chr1_+_39456956 NM_001136275 NM_024595 AK022728 AK092624 AX747634 AK124799 AK126262 AK223276 AK298890 AK303098 BC001498 BC119745 BC119746 AY326465	-101046	+	NM_015038	317067	+	TSC_hg19_v1_chr1_+_39922264 AK023821	364211	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	399237	+	AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##NM_001184979|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_004552|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AK312188|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF047434|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC093057|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF020352|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##AF086268|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##BC001884|NDUFS5|4725|NADH dehydrogenase (ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q reductase)##NM_001136275|AKIRIN1|79647|akirin 1##NM_024595|AKIRIN1|79647|akirin 1##AK022728|AKIRIN1|79647|akirin 1##AK092624|AKIRIN1|79647|akirin 1##AK124799|AKIRIN1|79647|akirin 1##AK126262|AKIRIN1|79647|akirin 1##AK223276|AKIRIN1|79647|akirin 1##AK298890|AKIRIN1|79647|akirin 1##AK303098|AKIRIN1|79647|akirin 1##BC001498|AKIRIN1|79647|akirin 1##BC119745|AKIRIN1|79647|akirin 1##BC119746|AKIRIN1|79647|akirin 1##AY326465|AKIRIN1|79647|akirin 1##NM_015038|KIAA0754|643314|KIAA0754##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a	0.0	
chr16	3285305	3285388	reg1033028.p2	3.795	+	AK315036 BC032575 AF060866 TSC_hg19_v1_chr16_-_3285159 BC025293 BC012909 AK056010 NM_001145447 NM_003454	-218	-	BC069335 NM_012360 Y14442	-31100	+	CU675598 TSC_hg19_v1_chr16_-_3191371	-93987	-	Y14443 BC054005 NM_001145448 NM_198088 NM_001145446 NM_198087	61	-	FJ785717 FJ785718 FJ785719 FJ785720 FJ785721 FJ785722 AB527834 BC101511 BC101537 Y14441 AK298660 AF018080 NM_000243 NM_001198536	21260	-	BC104941 BC104943 TSC_hg19_v1_chr16_+_3313780 AK295350 AK096958	28426	+	AK315036|ZNF200|7752|zinc finger protein 200##BC032575|ZNF200|7752|zinc finger protein 200##AF060866|ZNF200|7752|zinc finger protein 200##BC025293|ZNF200|7752|zinc finger protein 200##BC012909|ZNF200|7752|zinc finger protein 200##AK056010|ZNF200|7752|zinc finger protein 200##NM_001145447|ZNF200|7752|zinc finger protein 200##NM_003454|ZNF200|7752|zinc finger protein 200##BC069335|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##NM_012360|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##Y14442|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##Y14443|ZNF200|7752|zinc finger protein 200##BC054005|ZNF200|7752|zinc finger protein 200##NM_001145448|ZNF200|7752|zinc finger protein 200##NM_198088|ZNF200|7752|zinc finger protein 200##NM_001145446|ZNF200|7752|zinc finger protein 200##NM_198087|ZNF200|7752|zinc finger protein 200##FJ785717|MEFV|4210|Mediterranean fever##FJ785718|MEFV|4210|Mediterranean fever##FJ785719|MEFV|4210|Mediterranean fever##FJ785720|MEFV|4210|Mediterranean fever##FJ785721|MEFV|4210|Mediterranean fever##FJ785722|MEFV|4210|Mediterranean fever##BC101511|MEFV|4210|Mediterranean fever##BC101537|MEFV|4210|Mediterranean fever##Y14441|MEFV|4210|Mediterranean fever##AK298660|MEFV|4210|Mediterranean fever##AF018080|MEFV|4210|Mediterranean fever##NM_000243|MEFV|4210|Mediterranean fever##NM_001198536|MEFV|4210|Mediterranean fever##BC104941|FLJ39639|283876|uncharacterized protein FLJ39639##BC104943|FLJ39639|283876|uncharacterized protein FLJ39639##AK096958|FLJ39639|283876|uncharacterized protein FLJ39639	0.0	
chr17	5130965	5131098	reg1032525.p2	3.795	+	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-35651	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-35858	-	AY143550 NM_004505 X63546 X63547	-99345	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	7070	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	54635	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	191894	-	AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##AY143550|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##NM_004505|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63546|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63547|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa	0.0	
chr19	35975861	35975943	reg1037475.p2	3.795	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	-35285	+	AK290710 NM_005304 BC035657	-126408	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	-133452	+	AM392574 AM392667 AM392672 AM392738 AM392847 AM392851 AM393397 AM393477 AY359007 HQ258707 BC130501 NM_001244847 NM_207392	5486	-	AY622964 AY789707 AF086315 AL832080 NM_001035516	16903	-	AY789698 AY789699 AY789700 AY789701 AY789702 AY789703 AY789704 AY789705 AY789706 BC011886 TSC_hg19_v1_chr19_-_36001373 AK096215 AK304668 AK316475 EF158323 NM_001126059 EF158324 EF158325 EF158326	25471	-	AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2##AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##AM392574|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392667|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392672|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392738|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392847|KRTDAP|388533|keratinocyte differentiation-associated protein##AM392851|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393397|KRTDAP|388533|keratinocyte differentiation-associated protein##AM393477|KRTDAP|388533|keratinocyte differentiation-associated protein##AY359007|KRTDAP|388533|keratinocyte differentiation-associated protein##HQ258707|KRTDAP|388533|keratinocyte differentiation-associated protein##BC130501|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_001244847|KRTDAP|388533|keratinocyte differentiation-associated protein##NM_207392|KRTDAP|388533|keratinocyte differentiation-associated protein##AY622964|DMKN|93099|dermokine##AY789707|DMKN|93099|dermokine##AF086315|DMKN|93099|dermokine##AL832080|DMKN|93099|dermokine##NM_001035516|DMKN|93099|dermokine##AY789698|DMKN|93099|dermokine##AY789699|DMKN|93099|dermokine##AY789700|DMKN|93099|dermokine##AY789701|DMKN|93099|dermokine##AY789702|DMKN|93099|dermokine##AY789703|DMKN|93099|dermokine##AY789704|DMKN|93099|dermokine##AY789705|DMKN|93099|dermokine##AY789706|DMKN|93099|dermokine##BC011886|DMKN|93099|dermokine##AK096215|DMKN|93099|dermokine##AK304668|DMKN|93099|dermokine##AK316475|DMKN|93099|dermokine##EF158323|DMKN|93099|dermokine##NM_001126059|DMKN|93099|dermokine##EF158324|DMKN|93099|dermokine##EF158325|DMKN|93099|dermokine##EF158326|DMKN|93099|dermokine	0.0	
chr6	145672285	145672414	reg1033332.p2	3.795	+	NM_007124 X69086	-1059431	+	TSC_hg19_v1_chr6_+_144607461 AK292506	-1064869	+	TSC_hg19_v1_chr6_+_144471653 NM_003764 AF044309 BC033519 AF071504	-1200628	+	AK124757 TSC_hg19_v1_chr6_+_146056061	383685	+	TSC_hg19_v1_chr6_-_146056437 AJ130763 AJ130764	384064	-	AF454494 TSC_hg19_v1_chr6_-_146056628 AF454493 BC005286 AF084535	384252	-	NM_007124|UTRN|7402|utrophin##X69086|UTRN|7402|utrophin##AK292506|UTRN|7402|utrophin##NM_003764|STX11|8676|syntaxin 11##AF044309|STX11|8676|syntaxin 11##BC033519|STX11|8676|syntaxin 11##AF071504|STX11|8676|syntaxin 11##AK124757|LOC100507557|100507557|uncharacterized LOC100507557##AJ130763|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AJ130764|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454494|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF454493|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##BC005286|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)##AF084535|EPM2A|7957|epilepsy, progressive myoclonus type 2A, Lafora disease (laforin)	0.212502	CTCF.p2:0:0.213
chr7	5639028	5639101	reg1032312.p2	3.795	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	-6554	+	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	-6626	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-68855	-	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	182158	-	BC004947 TSC_hg19_v1_chr7_-_5821284 AK297231 BC063825 AK092767 AX747717 AK297416 BX537406 NM_207111 NM_207116 AK292396	182245	-	TSC_hg19_v1_chr7_+_5862791 AK291169 AK096288	223721	+	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216##BC004947|RNF216|54476|ring finger protein 216##AK297231|RNF216|54476|ring finger protein 216##BC063825|RNF216|54476|ring finger protein 216##AK092767|RNF216|54476|ring finger protein 216##AK297416|RNF216|54476|ring finger protein 216##BX537406|RNF216|54476|ring finger protein 216##NM_207111|RNF216|54476|ring finger protein 216##NM_207116|RNF216|54476|ring finger protein 216##AK292396|RNF216|54476|ring finger protein 216##AK291169|ZNF815|401303|zinc finger protein 815##AK096288|ZNF815|401303|zinc finger protein 815	0.0	
chr7	92442850	92442978	reg1039428.p1	3.795	+	TSC_hg19_v1_chr7_-_92219705 BC079834 BC090868 BC057771 AK125498 AL833918 BC017874 NM_001040057 NM_152789 BC062706	-223216	-	TSC_hg19_v1_chr7_-_92219660 BC032461 BC157872	-223272	-	BC104865 BC104867 BC143576 NM_032120 CR933641 BC044570 AL136619 BC020919 BC033561 CR936726 AK294626 AK294812 AF161422 BC065716 CR533549	-284808	+	AB528631 CU690894 X66365 TSC_hg19_v1_chr7_-_92462894	19853	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	20306	-	AK313491 TSC_hg19_v1_chr7_-_92465884	22984	-	BC090868|FAM133B|257415|family with sequence similarity 133, member B##BC057771|FAM133B|257415|family with sequence similarity 133, member B##AK125498|FAM133B|257415|family with sequence similarity 133, member B##AL833918|FAM133B|257415|family with sequence similarity 133, member B##BC017874|FAM133B|257415|family with sequence similarity 133, member B##NM_001040057|FAM133B|257415|family with sequence similarity 133, member B##NM_152789|FAM133B|257415|family with sequence similarity 133, member B##BC062706|FAM133B|257415|family with sequence similarity 133, member B##BC032461|FAM133B|257415|family with sequence similarity 133, member B##BC157872|FAM133B|257415|family with sequence similarity 133, member B##BC104865|RBM48|84060|RNA binding motif protein 48##BC104867|RBM48|84060|RNA binding motif protein 48##BC143576|RBM48|84060|RNA binding motif protein 48##NM_032120|RBM48|84060|RNA binding motif protein 48##CR933641|RBM48|84060|RNA binding motif protein 48##BC044570|RBM48|84060|RNA binding motif protein 48##AL136619|RBM48|84060|RNA binding motif protein 48##BC020919|RBM48|84060|RNA binding motif protein 48##BC033561|RBM48|84060|RNA binding motif protein 48##CR936726|RBM48|84060|RNA binding motif protein 48##AK294626|RBM48|84060|RNA binding motif protein 48##AK294812|RBM48|84060|RNA binding motif protein 48##AF161422|RBM48|84060|RNA binding motif protein 48##BC065716|RBM48|84060|RNA binding motif protein 48##CR533549|RBM48|84060|RNA binding motif protein 48##X66365|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6	0.0	
chr8	26466968	26467106	reg1035251.p1	3.795	+	NM_001244604 TSC_hg19_v1_chr8_+_26435921 AK299077	-31110	+	TSC_hg19_v1_chr8_+_26435604 U17279 AB370194 AB590733 BT006944 CU691152	-31357	+	TSC_hg19_v1_chr8_+_26435468 AK223557 BC056408 D78013 BC010880 AK291287	-31510	+	U02569 AY491775 AY491776 AY491777 AY491778 AY491779 AY491780 AY491781 D25235 D32201 D32202 NM_000680 NM_033302 NM_033303 NM_033304	255881	-	AK311558 TSC_hg19_v1_chr8_-_26724735	257697	-	TSC_hg19_v1_chr8_-_26724764 AK289548	257721	-	NM_001244604|DPYSL2|1808|dihydropyrimidinase-like 2##AK299077|DPYSL2|1808|dihydropyrimidinase-like 2##U17279|DPYSL2|1808|dihydropyrimidinase-like 2##AB370194|DPYSL2|1808|dihydropyrimidinase-like 2##AK223557|DPYSL2|1808|dihydropyrimidinase-like 2##BC056408|DPYSL2|1808|dihydropyrimidinase-like 2##D78013|DPYSL2|1808|dihydropyrimidinase-like 2##AK291287|DPYSL2|1808|dihydropyrimidinase-like 2##U02569|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491775|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491776|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491777|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491778|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491780|ADRA1A|148|adrenergic, alpha-1A-, receptor##AY491781|ADRA1A|148|adrenergic, alpha-1A-, receptor##D25235|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32201|ADRA1A|148|adrenergic, alpha-1A-, receptor##D32202|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_000680|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033302|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033303|ADRA1A|148|adrenergic, alpha-1A-, receptor##NM_033304|ADRA1A|148|adrenergic, alpha-1A-, receptor##AK289548|ADRA1A|148|adrenergic, alpha-1A-, receptor	0.0	
chr9	138114261	138114370	reg1032422.p1	3.795	+	AK290478 TSC_hg19_v1_chr9_+_137979513	-134801	+	TSC_hg19_v1_chr9_+_137967404 AK289921 CU679089 BT007146	-146824	+	BC008763 BC011741 TSC_hg19_v1_chr9_+_137967372 AK289719	-146942	+	TSC_hg19_v1_chr9_+_138371663 AB014549 NM_014811	257335	+	AY927868 DQ892784 DQ896031 NM_001048265 NM_144654	277413	-	TSC_hg19_v1_chr9_+_138392535 NM_016034 BC008017 BC013108 AB055388 AF151849	278198	+	AK290478|OLFM1|10439|olfactomedin 1##AK289921|OLFM1|10439|olfactomedin 1##BT007146|OLFM1|10439|olfactomedin 1##BC008763|OLFM1|10439|olfactomedin 1##BC011741|OLFM1|10439|olfactomedin 1##AK289719|OLFM1|10439|olfactomedin 1##AB014549|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##NM_014811|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##AY927868|C9orf116|138162|chromosome 9 open reading frame 116##DQ892784|C9orf116|138162|chromosome 9 open reading frame 116##DQ896031|C9orf116|138162|chromosome 9 open reading frame 116##NM_001048265|C9orf116|138162|chromosome 9 open reading frame 116##NM_144654|C9orf116|138162|chromosome 9 open reading frame 116##NM_016034|MRPS2|51116|mitochondrial ribosomal protein S2##BC008017|MRPS2|51116|mitochondrial ribosomal protein S2##BC013108|MRPS2|51116|mitochondrial ribosomal protein S2##AB055388|MRPS2|51116|mitochondrial ribosomal protein S2##AF151849|MRPS2|51116|mitochondrial ribosomal protein S2	0.0	
chrX	154365881	154365986	reg1032318.p1	3.795	+	TSC_hg19_v1_chrX_+_154299784 AK310286 X64643 AK299194 AK313544 BC002999 BC006540 AB462964 AM392829 AY438030 CU678330 AK298886	-66143	+	TSC_hg19_v1_chrX_+_154299709 NM_001018055 NM_001242640 NM_024332	-66226	+	TSC_hg19_v1_chrX_-_154299405 BC002600 X64644 NM_001018024 NM_001018025	-66486	-	NM_003372 TSC_hg19_v1_chrX_+_154444736 BC009570 AK313420 BC046094 Y17394 BC040002 AB464347 BT019604 CU692296	78796	+	AL834460 TSC_hg19_v1_chrX_-_154493774 AY052478 NM_171998 BC009714	127871	-	AB463493 AM393055 AY191592 DQ892014 DQ895204 BC022305 BC005367 AK292785 Y12696 NM_001289	197927	-	AK310286|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##X64643|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK299194|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK313544|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC002999|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC006540|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AM392829|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AY438030|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##AK298886|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_001018055|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_001242640|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##NM_024332|BRCC3|79184|BRCA1/BRCA2-containing complex, subunit 3##BC002600|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##X64644|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##NM_001018024|MTCP1NB|100272147|mature T-cell proliferation 1 neighbor##NM_001018025|MTCP1|4515|mature T-cell proliferation 1##NM_003372|VBP1|7411|von Hippel-Lindau binding protein 1##BC009570|VBP1|7411|von Hippel-Lindau binding protein 1##AK313420|VBP1|7411|von Hippel-Lindau binding protein 1##BC046094|VBP1|7411|von Hippel-Lindau binding protein 1##Y17394|VBP1|7411|von Hippel-Lindau binding protein 1##BC040002|VBP1|7411|von Hippel-Lindau binding protein 1##BT019604|VBP1|7411|von Hippel-Lindau binding protein 1##AL834460|RAB39B|116442|RAB39B, member RAS oncogene family##AY052478|RAB39B|116442|RAB39B, member RAS oncogene family##NM_171998|RAB39B|116442|RAB39B, member RAS oncogene family##BC009714|RAB39B|116442|RAB39B, member RAS oncogene family##AM393055|CLIC2|1193|chloride intracellular channel 2##AY191592|CLIC2|1193|chloride intracellular channel 2##DQ892014|CLIC2|1193|chloride intracellular channel 2##DQ895204|CLIC2|1193|chloride intracellular channel 2##BC022305|CLIC2|1193|chloride intracellular channel 2##BC005367|CLIC2|1193|chloride intracellular channel 2##AK292785|CLIC2|1193|chloride intracellular channel 2##Y12696|CLIC2|1193|chloride intracellular channel 2##NM_001289|CLIC2|1193|chloride intracellular channel 2	0.337884	CTCF.p2:17:0.338
chr12	122232342	122232522	reg1005077.p2	3.794	+	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	-858	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	-81688	+	BC057760 NM_173855	-124873	-	TSC_hg19_v1_chr12_-_122240852 AK311480	8425	-	TSC_hg19_v1_chr12_+_122242580 NM_015048 JF813787	10179	+	CU692906 DQ892664 DQ896049 BC024287 BC014790 X72389 TSC_hg19_v1_chr12_-_122296766 AK290826 NM_002150	64261	-	AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##NM_015048|SETD1B|23067|SET domain containing 1B##JF813787|SETD1B|23067|SET domain containing 1B##DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase	0.0	
chr15	66220802	66220948	reg1030495.p1	3.794	+	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	-59028	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-136282	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	-136402	-	TSC_hg19_v1_chr15_-_66321664 AK054827	100818	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	325202	-	NM_133375 AK295392 BC022089	364770	+	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	0.153173	
chr15	75463922	75464010	reg1040205.p2	3.794	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-147985	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-148038	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-176059	+	AK128205 TSC_hg19_v1_chr15_+_75491259	27280	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	30246	+	BC110367 TSC_hg19_v1_chr15_+_75494233	30267	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.049034	
chr16	21525281	21525453	reg1029926.p1	3.794	+	BC036263 NM_130464	-88710	-	BX648477 NM_001014444 NM_001888	-210980	-	BC018061 AK290852 TSC_hg19_v1_chr16_-_21289660	-235719	-	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	6385	-	TSC_hg19_v1_chr16_+_21610912 NM_001077180 NM_016025 AJ278577 AJ278578 AK074529 BC000195 AK313077 AK075022 AK075237	85523	+	AF151839 TSC_hg19_v1_chr16_+_21611174	85787	+	BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BX648477|CRYM|1428|crystallin, mu##NM_001014444|CRYM|1428|crystallin, mu##NM_001888|CRYM|1428|crystallin, mu##BC018061|CRYM|1428|crystallin, mu##AK290852|CRYM|1428|crystallin, mu##BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2##NM_001077180|METTL9|51108|methyltransferase like 9##NM_016025|METTL9|51108|methyltransferase like 9##AJ278577|METTL9|51108|methyltransferase like 9##AJ278578|METTL9|51108|methyltransferase like 9##AK074529|METTL9|51108|methyltransferase like 9##BC000195|METTL9|51108|methyltransferase like 9##AK313077|METTL9|51108|methyltransferase like 9##AK075022|METTL9|51108|methyltransferase like 9##AK075237|METTL9|51108|methyltransferase like 9##AF151839|METTL9|51108|methyltransferase like 9	0.05699	
chr18	42777467	42777648	reg1035499.p1	3.794	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-516689	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-517443	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1920128	-	NM_001242692 AK292422	15395	+	AF349446 NM_007163	417208	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	526547	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.0	
chr4	1161212	1161282	reg1006635.p2	3.794	+	BC101258 BC101259 BC101260 BC101261 BC036250 AK310043 BC050356 AK096160 NM_001131034 NM_001193318 NM_194439	-53915	-	AJ277437 NM_021923 AB385230 DQ892417 DQ895631 AK225486	-154982	+	AF312678 AY358303 NM_001004356 AF279689 NM_001004358	-155563	+	TSC_hg19_v1_chr4_-_1166372 AK130164	5122	-	TSC_hg19_v1_chr4_-_1166378 BC002707	5141	-	TSC_hg19_v1_chr4_-_1166480 AK074618	5240	-	BC101258|RNF212|285498|ring finger protein 212##BC101259|RNF212|285498|ring finger protein 212##BC101260|RNF212|285498|ring finger protein 212##BC101261|RNF212|285498|ring finger protein 212##BC036250|RNF212|285498|ring finger protein 212##AK310043|RNF212|285498|ring finger protein 212##BC050356|RNF212|285498|ring finger protein 212##AK096160|RNF212|285498|ring finger protein 212##NM_001131034|RNF212|285498|ring finger protein 212##NM_001193318|RNF212|285498|ring finger protein 212##NM_194439|RNF212|285498|ring finger protein 212##AJ277437|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_021923|FGFRL1|53834|fibroblast growth factor receptor-like 1##DQ892417|FGFRL1|53834|fibroblast growth factor receptor-like 1##DQ895631|FGFRL1|53834|fibroblast growth factor receptor-like 1##AK225486|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF312678|FGFRL1|53834|fibroblast growth factor receptor-like 1##AY358303|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004356|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF279689|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004358|FGFRL1|53834|fibroblast growth factor receptor-like 1##AK130164|SPON2|10417|spondin 2, extracellular matrix protein##BC002707|SPON2|10417|spondin 2, extracellular matrix protein##AK074618|SPON2|10417|spondin 2, extracellular matrix protein	0.0	
chr10	124904500	124904601	reg1034429.p1	3.793	+	NM_001105574 TSC_hg19_v1_chr10_+_124895620	-8957	+	TSC_hg19_v1_chr10_+_124768521 BC013756 U12778 AK314241 AB527625 CU680672 AL831821	-136022	+	TSC_hg19_v1_chr10_+_124768471 NM_001609 AK298638	-136102	+	NM_005519	3087	+	NM_001007793 NM_004725 TSC_hg19_v1_chr10_+_124913846	9255	+	TSC_hg19_v1_chr10_+_124913883 BX647392	9322	+	NM_001105574|HMX3|340784|H6 family homeobox 3##BC013756|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##U12778|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK314241|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AL831821|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##NM_001609|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK298638|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##NM_005519|HMX2|3167|H6 family homeobox 2##NM_001007793|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##NM_004725|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BX647392|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)	0.041772	
chr14	23259580	23259734	reg1033103.p2	3.793	+	BC112331 NM_005015 TSC_hg19_v1_chr14_+_23235896 AK294849 AK298249 BC001669 X80695 BX248295 BX248001	-23812	+	TSC_hg19_v1_chr14_+_23067208 AK022878 NM_022060 AX721056 BC024779 AK298127 AK301315 AK293198	-192468	+	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	-201523	-	TSC_hg19_v1_chr14_-_23284568 AK025377	24922	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	24975	-	AB020532 BX161519 NM_001126105	25401	-	BC112331|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##NM_005015|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK294849|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK298249|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BC001669|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##X80695|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248295|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248001|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK022878|ABHD4|63874|abhydrolase domain containing 4##NM_022060|ABHD4|63874|abhydrolase domain containing 4##BC024779|ABHD4|63874|abhydrolase domain containing 4##AK298127|ABHD4|63874|abhydrolase domain containing 4##AK301315|ABHD4|63874|abhydrolase domain containing 4##AK293198|ABHD4|63874|abhydrolase domain containing 4##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1##AK025377|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AB020532|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX161519|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126105|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	0.0	
chr16	23953663	23953792	reg1033669.p1	3.793	+	AB587511 EU832791 GQ129253 TSC_hg19_v1_chr16_+_23847512	-106221	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	-106332	+	TSC_hg19_v1_chr16_+_23847321 BC036472	-106395	+	BC037899 NM_006539 AK095553	313147	+	AK055453 TSC_hg19_v1_chr16_+_24267474	313747	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	313971	+	EU832791|PRKCB|5579|protein kinase C, beta##GQ129253|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	0.0	
chr16	23961375	23961537	reg1036519.p2	3.793	+	AB587511 EU832791 GQ129253 TSC_hg19_v1_chr16_+_23847512	-113950	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	-114061	+	TSC_hg19_v1_chr16_+_23847321 BC036472	-114124	+	BC037899 NM_006539 AK095553	305418	+	AK055453 TSC_hg19_v1_chr16_+_24267474	306018	+	BC033741 TSC_hg19_v1_chr16_+_24267692 AK315150 BC040005	306242	+	EU832791|PRKCB|5579|protein kinase C, beta##GQ129253|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##BC037899|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##NM_006539|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK095553|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK055453|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC033741|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##AK315150|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3##BC040005|CACNG3|10368|calcium channel, voltage-dependent, gamma subunit 3	0.032894	
chr2	108189428	108189554	reg1036993.p1	3.793	+	TSC_hg19_v1_chr2_-_107503517 AX795200 AB059555 BC008680 AK307784 NM_001142352 NM_032528 FJ433883	-685945	-	TSC_hg19_v1_chr2_-_107503063 FJ433884	-686429	-	AB058780 NM_001142351 TSC_hg19_v1_chr2_-_107502624	-686872	-	NM_182588 TSC_hg19_v1_chr2_+_108443399	253903	+	AK315280 AB084377 AK300801 AB043997 NM_021815 BC111525 BC111524	413511	+	AB528243 NM_001008743	674159	+	AB059555|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##BC008680|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##AK307784|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142352|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_032528|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_182588|RGPD4|285190|RANBP2-like and GRIP domain containing 4##AK315280|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB084377|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AK300801|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB043997|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_021815|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111525|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111524|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3	0.830068	CTCF.p2:4:0.830
chr3	131513945	131514126	reg1001706.p2	3.793	+	TSC_hg19_v1_chr3_-_131221816 CR456720 CU678442 BC002345 X06323 BC003375 AK301377 AK296626 NM_007208	-292281	-	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	-413384	+	TSC_hg19_v1_chr3_+_131080737 AK000532 BC015593	-433292	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	239805	-	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	522203	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	522253	+	CR456720|MRPL3|11222|mitochondrial ribosomal protein L3##X06323|MRPL3|11222|mitochondrial ribosomal protein L3##BC003375|MRPL3|11222|mitochondrial ribosomal protein L3##AK301377|MRPL3|11222|mitochondrial ribosomal protein L3##AK296626|MRPL3|11222|mitochondrial ribosomal protein L3##NM_007208|MRPL3|11222|mitochondrial ribosomal protein L3##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK000532|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##BC015593|NUDT16P1|152195|nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1##AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate	0.0	
chr3	189735597	189735754	reg1037264.p2	3.793	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	-228157	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-386416	+	AK125682 NM_198485 BC101550 BC101552	-845864	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	103020	-	NM_018192	103232	-	NM_001134418	104550	-	AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##NM_001134418|LEPREL1|55214|leprecan-like 1	0.828609	CTCF.p2:-26:0.829
chr4	185435673	185435802	reg1031747.p2	3.793	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	-40056	-	BC035035 AY358676 AK057370 NM_153343	-296672	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-607826	+	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	134864	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	135096	+	TSC_hg19_v1_chr4_+_185570923 BC064600 AK307317	135192	+	X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111##BC064600|CCDC111|201973|coiled-coil domain containing 111##AK307317|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr4	40839632	40839740	reg1033076.p1	3.793	+	BC042401 NM_024677 BC036568 AK024063	-87740	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-206979	-	TSC_hg19_v1_chr4_-_40631882 BC034402 BC071585 NM_001098634	-207821	-	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	19489	-	BC088372 TSC_hg19_v1_chr4_-_40936716	96992	-	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	376883	-	BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK304206|RBM47|54502|RNA binding motif protein 47##BC034402|RBM47|54502|RNA binding motif protein 47##BC071585|RBM47|54502|RNA binding motif protein 47##NM_001098634|RBM47|54502|RNA binding motif protein 47##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	0.040852	
chr6	3069092	3069268	reg1030853.p1	3.793	+	AK314176 TSC_hg19_v1_chr6_+_3064200 AB208926	-5014	+	TSC_hg19_v1_chr6_+_3000111 NM_000904 AK311746 AK056981 J02888	-69052	+	AK094983 NM_001195291 NM_004568	-96782	-	BC126254 BC126256 HQ258488 NM_003804 U50062 AK304701	7884	+	TSC_hg19_v1_chr6_+_3118961 AK297518 NM_004332 AK314909 AL832502 AJ617684 X81372	49771	+	AY159127 CR541958 CU674602 AB528583 DQ892343 DQ895718 BC001194 TSC_hg19_v1_chr6_-_3157779 BC018780 X79535 AK308772 AK312621 NM_001069	88566	-	AK314176|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AB208926|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##NM_000904|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK311746|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK056981|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##J02888|NQO2|4835|NAD(P)H dehydrogenase, quinone 2##AK094983|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_001195291|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##NM_004568|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC126254|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##BC126256|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##HQ258488|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##NM_003804|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##U50062|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK304701|RIPK1|8737|receptor (TNFRSF)-interacting serine-threonine kinase 1##AK297518|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##NM_004332|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AK314909|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AL832502|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AJ617684|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##X81372|BPHL|670|biphenyl hydrolase-like (serine hydrolase)##AY159127|TUBB2A|7280|tubulin, beta 2A class IIa##CR541958|TUBB2A|7280|tubulin, beta 2A class IIa##DQ892343|TUBB2A|7280|tubulin, beta 2A class IIa##DQ895718|TUBB2A|7280|tubulin, beta 2A class IIa##BC001194|TUBB2A|7280|tubulin, beta 2A class IIa##BC018780|TUBB2A|7280|tubulin, beta 2A class IIa##X79535|TUBB2A|7280|tubulin, beta 2A class IIa##AK312621|TUBB2A|7280|tubulin, beta 2A class IIa##NM_001069|TUBB2A|7280|tubulin, beta 2A class IIa	0.0	
chr9	134079312	134079457	reg1030860.p2	3.793	+	TSC_hg19_v1_chr9_+_134001016 D14689 AB159230	-78334	+	TSC_hg19_v1_chr9_+_134000975 BC105998 AK307573 NM_005085 AL832609 X64228 BC045620 BC012500	-78410	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	-107426	+	BC049388 NM_033387 AK095423	72535	-	TSC_hg19_v1_chr9_+_134165108 AK075207 NM_032728 BC006362 AK027568 AK315502 AB385550	85844	+	TSC_hg19_v1_chr9_+_134269515 BC002872	190182	+	D14689|NUP214|8021|nucleoporin 214kDa##AB159230|NUP214|8021|nucleoporin 214kDa##BC105998|NUP214|8021|nucleoporin 214kDa##AK307573|NUP214|8021|nucleoporin 214kDa##NM_005085|NUP214|8021|nucleoporin 214kDa##AL832609|NUP214|8021|nucleoporin 214kDa##X64228|NUP214|8021|nucleoporin 214kDa##BC045620|NUP214|8021|nucleoporin 214kDa##BC012500|NUP214|8021|nucleoporin 214kDa##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like##BC049388|FAM78A|286336|family with sequence similarity 78, member A##NM_033387|FAM78A|286336|family with sequence similarity 78, member A##AK095423|FAM78A|286336|family with sequence similarity 78, member A##AK075207|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##NM_032728|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC006362|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK027568|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK315502|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC002872|PRRC2B|84726|proline-rich coiled-coil 2B	0.071036	
chr9	33124893	33125074	reg1017227.p1	3.793	+	TSC_hg19_v1_chr9_-_33076673 NM_018225	-48291	-	CU678268 DQ893005 DQ896251 TSC_hg19_v1_chr9_-_33076667 AK001667 BC002876 EF011613 AK225587 AK304767 AK225559	-48346	-	BT007292 CU678881 DQ891091 EU176556 TSC_hg19_v1_chr9_+_33026519	-98483	+	TSC_hg19_v1_chr9_-_33167158 AK316294	42141	-	AB590749 X55415 TSC_hg19_v1_chr9_-_33167196 AK296928 AK312797	42203	-	D29805 X13223 X14085 M22921 U10474 TSC_hg19_v1_chr9_-_33167262	42264	-	NM_018225|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##DQ893005|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##DQ896251|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##AK001667|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##BC002876|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##EF011613|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##AK225587|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##AK304767|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##AK225559|SMU1|55234|smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)##BT007292|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##DQ891091|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##EU176556|DNAJA1|3301|DnaJ (Hsp40) homolog, subfamily A, member 1##AK316294|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X55415|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AK296928|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AK312797|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##D29805|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X13223|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X14085|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##M22921|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##U10474|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1	0.017359	
chr9	82761491	82761650	reg1039785.p1	3.793	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	-573885	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	-574046	+	TSC_hg19_v1_chr9_+_82186879 NM_007005	-574684	+	BC010100 NM_005077	1542025	-	TSC_hg19_v1_chr9_-_84304463 AB209854	1542857	-	NM_001145197 AK125847 AK308327	1781801	+	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC010100|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_005077|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##AB209854|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4##AK125847|FAM75D4|389761|family with sequence similarity 75, member D4##AK308327|FAM75D4|389761|family with sequence similarity 75, member D4	0.0	
chr10	26657443	26657624	reg1038145.p2	3.792	+	M74826 BC029517 M81882 TSC_hg19_v1_chr10_+_26505702 BC126327 BC126329 AB527954 HQ258311	-151868	+	NM_000818 NM_001134366	-152298	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	-434353	+	TSC_hg19_v1_chr10_+_26727269 NM_019043	69738	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	69784	+	TSC_hg19_v1_chr10_+_26727679 BC054516	70135	+	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##HQ258311|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA##NM_019043|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	0.0	
chr10	61808024	61808151	reg1034642.p1	3.792	+	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-141763	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	-141886	-	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-338363	-	AK292927 AK092527 NM_001149	92629	-	U13616 NM_020987	341473	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	524603	-	BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##S72869|CCDC6|8030|coiled-coil domain containing 6##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.804642	CTCF.p2:37:0.805
chr11	102459766	102459947	reg1030685.p1	3.792	+	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	-58397	-	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-136243	-	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-241828	+	AB527354 NM_004771 Y12779	36199	-	AB527320 AF195192 AY358752 NM_022122	116599	-	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	135797	-	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	0.0	
chr11	112708292	112708422	reg1038218.p2	3.792	+	AY364435 NM_001145024	-576775	-	TSC_hg19_v1_chr11_+_112097100 NM_000317 BC018029 D17400 AK310768 BC009686 AK307133 M97655 AM392676 AM393300 AM393668 DQ890961 DQ894133	-611230	+	NM_001037290 AK027801 AK297853 AB096252	-661252	+	NM_000615 NM_001076682 NM_001242607 NM_001242608 NM_181351 TSC_hg19_v1_chr11_+_112831996 AK314589	123630	+	AB209443 TSC_hg19_v1_chr11_+_112832141 AF005070 BC047244 S71824 BC029119	123774	+	X16841 TSC_hg19_v1_chr11_+_112832212	123849	+	AY364435|C11orf34|349633|chromosome 11 open reading frame 34##NM_001145024|C11orf34|349633|chromosome 11 open reading frame 34##NM_000317|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC018029|PTS|5805|6-pyruvoyltetrahydropterin synthase##D17400|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK310768|PTS|5805|6-pyruvoyltetrahydropterin synthase##BC009686|PTS|5805|6-pyruvoyltetrahydropterin synthase##AK307133|PTS|5805|6-pyruvoyltetrahydropterin synthase##M97655|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM392676|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393300|PTS|5805|6-pyruvoyltetrahydropterin synthase##AM393668|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ890961|PTS|5805|6-pyruvoyltetrahydropterin synthase##DQ894133|PTS|5805|6-pyruvoyltetrahydropterin synthase##NM_001037290|BCO2|83875|beta-carotene oxygenase 2##AK027801|BCO2|83875|beta-carotene oxygenase 2##AK297853|BCO2|83875|beta-carotene oxygenase 2##AB096252|BCO2|83875|beta-carotene oxygenase 2##NM_000615|NCAM1|4684|neural cell adhesion molecule 1##NM_001076682|NCAM1|4684|neural cell adhesion molecule 1##NM_001242607|NCAM1|4684|neural cell adhesion molecule 1##NM_001242608|NCAM1|4684|neural cell adhesion molecule 1##NM_181351|NCAM1|4684|neural cell adhesion molecule 1##AK314589|NCAM1|4684|neural cell adhesion molecule 1##AB209443|NCAM1|4684|neural cell adhesion molecule 1##AF005070|NCAM1|4684|neural cell adhesion molecule 1##BC047244|NCAM1|4684|neural cell adhesion molecule 1##S71824|NCAM1|4684|neural cell adhesion molecule 1##BC029119|NCAM1|4684|neural cell adhesion molecule 1##X16841|NCAM1|4684|neural cell adhesion molecule 1	0.713267	CTCF.p2:-15:0.713
chr12	51318106	51318201	reg1031510.p1	3.792	+	NM_182559 BC035123 BC048112 CU690554	-81430	+	TSC_hg19_v1_chr12_+_51158275 AK299240	-159895	+	TSC_hg19_v1_chr12_+_51157883 NM_005171 AK313406 BC029619	-160275	+	TSC_hg19_v1_chr12_+_51318519 NM_014033	371	+	TSC_hg19_v1_chr12_+_51318801 AY358797 AK024409 AK307071 AK225689 AK225595 AK023693 AK293356 AJ536233 BC008180 BC004492 AB590800 EU832657 EU832734 AL050159 AF113007	648	+	NM_001109619	29628	+	NM_182559|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC035123|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##BC048112|TMPRSS12|283471|transmembrane (C-terminal) protease, serine 12##AK299240|ATF1|466|activating transcription factor 1##NM_005171|ATF1|466|activating transcription factor 1##AK313406|ATF1|466|activating transcription factor 1##BC029619|ATF1|466|activating transcription factor 1##NM_014033|METTL7A|25840|methyltransferase like 7A##AY358797|METTL7A|25840|methyltransferase like 7A##AK024409|METTL7A|25840|methyltransferase like 7A##AK307071|METTL7A|25840|methyltransferase like 7A##AK225689|METTL7A|25840|methyltransferase like 7A##AK225595|METTL7A|25840|methyltransferase like 7A##AK023693|METTL7A|25840|methyltransferase like 7A##AK293356|METTL7A|25840|methyltransferase like 7A##AJ536233|METTL7A|25840|methyltransferase like 7A##BC008180|METTL7A|25840|methyltransferase like 7A##BC004492|METTL7A|25840|methyltransferase like 7A##EU832657|METTL7A|25840|methyltransferase like 7A##EU832734|METTL7A|25840|methyltransferase like 7A##AL050159|METTL7A|25840|methyltransferase like 7A##AF113007|METTL7A|25840|methyltransferase like 7A##NM_001109619|HIGD1C|613227|HIG1 hypoxia inducible domain family, member 1C	0.0	
chr12	77024750	77024851	reg1038446.p1	3.792	+	TSC_hg19_v1_chr12_-_76953586 AF323730 AF392452 NM_001003712 NM_020841	-71192	-	TSC_hg19_v1_chr12_-_76953526 BC082235	-71269	-	BC111728 TSC_hg19_v1_chr12_-_76953484	-71317	-	TSC_hg19_v1_chr12_+_77157882 NM_015336 BC030990	133062	+	TSC_hg19_v1_chr12_+_77157894 BC050324 AB023163	133104	+	AB385406 CU690640 AF049612 AF161412 TSC_hg19_v1_chr12_+_77158026 AB097013 AB097035 AK292866 AK299089	133226	+	AF323730|OSBPL8|114882|oxysterol binding protein-like 8##AF392452|OSBPL8|114882|oxysterol binding protein-like 8##NM_001003712|OSBPL8|114882|oxysterol binding protein-like 8##NM_020841|OSBPL8|114882|oxysterol binding protein-like 8##BC082235|OSBPL8|114882|oxysterol binding protein-like 8##BC111728|OSBPL8|114882|oxysterol binding protein-like 8##NM_015336|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC030990|ZDHHC17|23390|zinc finger, DHHC-type containing 17##BC050324|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB023163|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF049612|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AF161412|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097013|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AB097035|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK292866|ZDHHC17|23390|zinc finger, DHHC-type containing 17##AK299089|ZDHHC17|23390|zinc finger, DHHC-type containing 17	0.0	
chr15	89014003	89014094	reg1034381.p2	3.792	+	TSC_hg19_v1_chr15_+_89010935 BC032378 BC012489 AK027059 AK026165 AK222933 AK315407 AK223152 BC000200 CU680342 CU689362 DQ891586 DQ894780 BC009451	-3122	+	AB049944 NM_022839 NM_176805	-3365	+	CU676098 AF205435 TSC_hg19_v1_chr15_-_89010620 AK315434 AF210056 BC017883 NM_022163	-3420	-	BC109060 BC109061 BC073867 AK054603 BC064591 AB073887 NM_001144074 NM_017996	75803	-	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	150522	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	168138	+	BC032378|MRPS11|64963|mitochondrial ribosomal protein S11##BC012489|MRPS11|64963|mitochondrial ribosomal protein S11##AK027059|MRPS11|64963|mitochondrial ribosomal protein S11##AK026165|MRPS11|64963|mitochondrial ribosomal protein S11##AK222933|MRPS11|64963|mitochondrial ribosomal protein S11##AK315407|MRPS11|64963|mitochondrial ribosomal protein S11##AK223152|MRPS11|64963|mitochondrial ribosomal protein S11##BC000200|MRPS11|64963|mitochondrial ribosomal protein S11##DQ891586|MRPS11|64963|mitochondrial ribosomal protein S11##DQ894780|MRPS11|64963|mitochondrial ribosomal protein S11##BC009451|MRPS11|64963|mitochondrial ribosomal protein S11##AB049944|MRPS11|64963|mitochondrial ribosomal protein S11##NM_022839|MRPS11|64963|mitochondrial ribosomal protein S11##NM_176805|MRPS11|64963|mitochondrial ribosomal protein S11##AF205435|MRPL46|26589|mitochondrial ribosomal protein L46##AK315434|MRPL46|26589|mitochondrial ribosomal protein L46##AF210056|MRPL46|26589|mitochondrial ribosomal protein L46##BC017883|MRPL46|26589|mitochondrial ribosomal protein L46##NM_022163|MRPL46|26589|mitochondrial ribosomal protein L46##BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa	0.0	
chr16	25027081	25027176	reg1024062.p2	3.792	+	TSC_hg19_v1_chr16_-_25026691 AK027567 AK291691 BC080195 AK301500 NM_001006634 NM_018054	-436	-	AJ306731 AJ306732 TSC_hg19_v1_chr16_-_25026604	-516	-	AK125358 TSC_hg19_v1_chr16_-_24968918	-58236	-	TSC_hg19_v1_chr16_+_25078227 BC023651 AK093382	51161	+	TSC_hg19_v1_chr16_+_25123062 NM_001032391 NM_016309 AK223364 AF151826 BC001214	95933	+	TSC_hg19_v1_chr16_+_25123102 AK025884 AK225271 AK291885 AK314409 BC014217 AF037601 CU674610 AL137283 CU676933	96069	+	AK027567|ARHGAP17|55114|Rho GTPase activating protein 17##AK291691|ARHGAP17|55114|Rho GTPase activating protein 17##BC080195|ARHGAP17|55114|Rho GTPase activating protein 17##AK301500|ARHGAP17|55114|Rho GTPase activating protein 17##NM_001006634|ARHGAP17|55114|Rho GTPase activating protein 17##NM_018054|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306731|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306732|ARHGAP17|55114|Rho GTPase activating protein 17##AK125358|ARHGAP17|55114|Rho GTPase activating protein 17##BC023651|LOC283887|283887|uncharacterized LOC283887##AK093382|LOC283887|283887|uncharacterized LOC283887##NM_001032391|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_016309|LCMT1|51451|leucine carboxyl methyltransferase 1##AK223364|LCMT1|51451|leucine carboxyl methyltransferase 1##AF151826|LCMT1|51451|leucine carboxyl methyltransferase 1##BC001214|LCMT1|51451|leucine carboxyl methyltransferase 1##AK025884|LCMT1|51451|leucine carboxyl methyltransferase 1##AK225271|LCMT1|51451|leucine carboxyl methyltransferase 1##AK291885|LCMT1|51451|leucine carboxyl methyltransferase 1##AK314409|LCMT1|51451|leucine carboxyl methyltransferase 1##BC014217|LCMT1|51451|leucine carboxyl methyltransferase 1##AF037601|LCMT1|51451|leucine carboxyl methyltransferase 1##AL137283|LCMT1|51451|leucine carboxyl methyltransferase 1	0.0	
chr16	85969919	85970100	reg1029649.p3	3.792	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-37223	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-136674	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-136704	+	TSC_hg19_v1_chr16_-_86542463 AK091834	572455	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	574147	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	574231	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.0	
chr4	39633456	39633569	reg1033223.p1	3.792	+	TSC_hg19_v1_chr4_+_39529635 AK056558	-103886	+	TSC_hg19_v1_chr4_-_39529187 NM_001184700 NM_001184701 NM_003359	-104337	-	TSC_hg19_v1_chr4_-_39529060 AF061016 AJ007702 BC022781 AK097930 AK297737	-104505	-	TSC_hg19_v1_chr4_-_39640486 AK023351 BC008502 NM_174921 AK307146	7044	-	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	66292	+	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	345826	-	NM_001184700|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001184701|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_003359|UGDH|7358|UDP-glucose 6-dehydrogenase##AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase##AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase##BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase##AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase##AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase##AK023351|C4orf34|201895|chromosome 4 open reading frame 34##BC008502|C4orf34|201895|chromosome 4 open reading frame 34##NM_174921|C4orf34|201895|chromosome 4 open reading frame 34##AK307146|C4orf34|201895|chromosome 4 open reading frame 34##NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	0.0	
chrY	1523357	1523520	reg1006122.p2	3.792	+	AK301844 NM_001173473	-787	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-1637	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-62469	-	BC043610 GQ280263 NM_178129 AK126147	82600	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	137091	+	NM_004043 U11090	140909	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr1	109633202	109633383	reg1039141.p1	3.791	+	AB587451 TSC_hg19_v1_chr1_-_109618626 X84003 BC017821 BC121180 BC121181 AK312158 NM_005645	-14691	-	TSC_hg19_v1_chr1_-_109584725 AK225781 AB020700 AK289789 BC039254 BC034964 NM_001142550 NM_001142551 NM_014969	-48573	-	TSC_hg19_v1_chr1_-_109506107 AK090563 AX746511 BC002939 AK293786 NM_001048210 NM_015127	-127215	-	BC066918 AK075191 TSC_hg19_v1_chr1_+_109633380 AF164793 AK310192 BC008739 BC065186 NM_020141 AK291293 BC067116	102	+	BC071822 TSC_hg19_v1_chr1_+_109642814	9522	+	BC127904 BC141949 BC141950 BC150515 TSC_hg19_v1_chr1_+_109648698	15353	+	X84003|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC121180|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##BC121181|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##AK312158|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##NM_005645|TAF13|6884|TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa##AK225781|WDR47|22911|WD repeat domain 47##AB020700|WDR47|22911|WD repeat domain 47##AK289789|WDR47|22911|WD repeat domain 47##BC039254|WDR47|22911|WD repeat domain 47##BC034964|WDR47|22911|WD repeat domain 47##NM_001142550|WDR47|22911|WD repeat domain 47##NM_001142551|WDR47|22911|WD repeat domain 47##NM_014969|WDR47|22911|WD repeat domain 47##AK090563|CLCC1|23155|chloride channel CLIC-like 1##BC002939|CLCC1|23155|chloride channel CLIC-like 1##AK293786|AKNAD1|254268|AKNA domain containing 1##NM_001048210|CLCC1|23155|chloride channel CLIC-like 1##NM_015127|CLCC1|23155|chloride channel CLIC-like 1##BC066918|TMEM167B|56900|transmembrane protein 167B##AK075191|TMEM167B|56900|transmembrane protein 167B##AF164793|TMEM167B|56900|transmembrane protein 167B##AK310192|TMEM167B|56900|transmembrane protein 167B##BC008739|TMEM167B|56900|transmembrane protein 167B##BC065186|TMEM167B|56900|transmembrane protein 167B##NM_020141|TMEM167B|56900|transmembrane protein 167B##AK291293|TMEM167B|56900|transmembrane protein 167B##BC067116|TMEM167B|56900|transmembrane protein 167B##BC071822|SCARNA2|677766|small Cajal body-specific RNA 2	0.0	
chr12	133026075	133026182	reg1023767.p1	3.791	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-120271	-	AF458594 NM_021808	-335556	-	TSC_hg19_v1_chr12_+_132629014 BC071958 CU687200 DQ892518 DQ895730 BC007893	-397072	+	NM_001142641	41028	+	NM_001195520	160908	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	169276	+	BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC071958|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ892518|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ895730|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC007893|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##NM_001142641|FBRSL1|57666|fibrosin-like 1##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2	0.0	
chr12	15045780	15045890	reg1038444.p1	3.791	+	BT006733 CR450358 DQ892495 DQ895707 X07362 AY542304 M58549 BC070314 X53331 BC005272 AK310040 AK312029 BC093078 TSC_hg19_v1_chr12_-_15038794 NM_000900 NM_001190839	-7047	-	AY829433 AY829434 NM_021071 AK291662 TSC_hg19_v1_chr12_-_14996461	-49411	-	BC132752 BC132754 AK092637 AX747644 NM_001013698	-78732	-	CU688844 BC030218 AY358536 NM_152321 AK056677	45626	-	TSC_hg19_v1_chr12_-_15114536 BC009200 X69549 L07916 AK311807 NM_001175 L20688	68713	-	NM_006205 DQ980604 D45399	80131	+	BT006733|MGP|4256|matrix Gla protein##CR450358|MGP|4256|matrix Gla protein##DQ892495|MGP|4256|matrix Gla protein##DQ895707|MGP|4256|matrix Gla protein##X07362|MGP|4256|matrix Gla protein##AY542304|MGP|4256|matrix Gla protein##M58549|MGP|4256|matrix Gla protein##BC070314|MGP|4256|matrix Gla protein##X53331|MGP|4256|matrix Gla protein##BC005272|MGP|4256|matrix Gla protein##AK312029|MGP|4256|matrix Gla protein##BC093078|MGP|4256|matrix Gla protein##NM_000900|MGP|4256|matrix Gla protein##NM_001190839|MGP|4256|matrix Gla protein##AY829433|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##AY829434|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##NM_021071|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##AK291662|ART4|420|ADP-ribosyltransferase 4 (Dombrock blood group)##BC132752|C12orf69|440087|chromosome 12 open reading frame 69##BC132754|C12orf69|440087|chromosome 12 open reading frame 69##AK092637|C12orf69|440087|chromosome 12 open reading frame 69##NM_001013698|C12orf69|440087|chromosome 12 open reading frame 69##BC030218|ERP27|121506|endoplasmic reticulum protein 27##AY358536|ERP27|121506|endoplasmic reticulum protein 27##NM_152321|ERP27|121506|endoplasmic reticulum protein 27##AK056677|ERP27|121506|endoplasmic reticulum protein 27##BC009200|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##X69549|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L07916|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##AK311807|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_001175|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##L20688|ARHGDIB|397|Rho GDP dissociation inhibitor (GDI) beta##NM_006205|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##DQ980604|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma##D45399|PDE6H|5149|phosphodiesterase 6H, cGMP-specific, cone, gamma	0.121918	
chr12	31739828	31739920	reg1030126.p2	3.791	+	BC000024 NM_001135811 NM_021238 TSC_hg19_v1_chr12_-_31479121 NM_001135812	-260735	-	TSC_hg19_v1_chr12_-_31479085 AF212220	-260773	-	BC071966 TSC_hg19_v1_chr12_-_31479052 BC004462 AK027736 AF087885 AK026932 AL157432	-260816	-	TSC_hg19_v1_chr12_-_31743924 BC068580 NM_144973	4044	-	AK290248 NM_001135864	60219	+	BC039535 NM_173802	72246	+	BC000024|FAM60A|58516|family with sequence similarity 60, member A##NM_001135811|FAM60A|58516|family with sequence similarity 60, member A##NM_021238|FAM60A|58516|family with sequence similarity 60, member A##NM_001135812|FAM60A|58516|family with sequence similarity 60, member A##AF212220|FAM60A|58516|family with sequence similarity 60, member A##BC071966|FAM60A|58516|family with sequence similarity 60, member A##BC004462|FAM60A|58516|family with sequence similarity 60, member A##AF087885|FAM60A|58516|family with sequence similarity 60, member A##AK026932|FAM60A|58516|family with sequence similarity 60, member A##AL157432|FAM60A|58516|family with sequence similarity 60, member A##BC068580|DENND5B|160518|DENN/MADD domain containing 5B##NM_144973|DENND5B|160518|DENN/MADD domain containing 5B##AK290248|METTL20|254013|methyltransferase like 20##NM_001135864|METTL20|254013|methyltransferase like 20##BC039535|METTL20|254013|methyltransferase like 20##NM_173802|METTL20|254013|methyltransferase like 20	0.0	
chr12	68045214	68045346	reg1038336.p1	3.791	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	-2657	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-381850	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-382108	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	508142	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	574272	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	602024	-	AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22	0.018084	
chr14	72129605	72129716	reg1037050.p1	3.791	+	AF090989 AF090990 NM_015556	-133619	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-755209	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-755527	+	AK294895 NM_001204423	269156	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	269493	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	270206	+	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6	0.0	
chr15	74704127	74704307	reg1037058.p2	3.791	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-44214	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-45682	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-93312	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	21812	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	22095	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	49230	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.0	
chr19	40250625	40250752	reg1041662.p1	3.791	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	-22049	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	-55645	+	FJ613352 NM_001190441	-104143	+	NM_001143832	16545	+	TSC_hg19_v1_chr19_-_40324779 AF205861 BC025291 AK074971 BC009688 AK302127 BC018751 NM_004714 NM_006483 NM_006484 Y17999	74110	-	BC019609 BC015218 TSC_hg19_v1_chr19_-_40331308 AB451384 BT006830 BT020144 CR457069	80603	-	FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001143832|LEUTX|342900|leucine twenty homeobox##AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC019609|FBL|2091|fibrillarin##BC015218|FBL|2091|fibrillarin##AB451384|FBL|2091|fibrillarin##BT006830|FBL|2091|fibrillarin##BT020144|FBL|2091|fibrillarin##CR457069|FBL|2091|fibrillarin	0.0	
chr19	48948666	48948798	reg1033519.p1	3.791	+	NM_000836 U77783	-50601	+	X55885 TSC_hg19_v1_chr19_-_48894809 BC008958 AB097047 BC018778 NM_006801 AK312647	-53934	-	CU676330 DQ891992 DQ895182 TSC_hg19_v1_chr19_-_48894672	-54088	-	NM_031485 TSC_hg19_v1_chr19_+_48949078 AK074676 AK300225	335	+	TSC_hg19_v1_chr19_+_48949239 AK131055 AK315625	496	+	TSC_hg19_v1_chr19_+_48949248 AF337808 BC002440 EF011614 AL713729 CU677962 DQ892630 DQ895868 AB075822 BC036281 BC047351	527	+	NM_000836|GRIN2D|2906|glutamate receptor, ionotropic, N-methyl D-aspartate 2D##U77783|GRIN2D|2906|glutamate receptor, ionotropic, N-methyl D-aspartate 2D##X55885|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##BC008958|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##AB097047|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##BC018778|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##NM_006801|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##AK312647|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##DQ891992|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##DQ895182|KDELR1|10945|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1##NM_031485|GRWD1|83743|glutamate-rich WD repeat containing 1##AK074676|GRWD1|83743|glutamate-rich WD repeat containing 1##AK300225|GRWD1|83743|glutamate-rich WD repeat containing 1##AK131055|GRWD1|83743|glutamate-rich WD repeat containing 1##AK315625|GRWD1|83743|glutamate-rich WD repeat containing 1##AF337808|GRWD1|83743|glutamate-rich WD repeat containing 1##BC002440|GRWD1|83743|glutamate-rich WD repeat containing 1##EF011614|GRWD1|83743|glutamate-rich WD repeat containing 1##AL713729|GRWD1|83743|glutamate-rich WD repeat containing 1##DQ892630|GRWD1|83743|glutamate-rich WD repeat containing 1##DQ895868|GRWD1|83743|glutamate-rich WD repeat containing 1##BC036281|GRWD1|83743|glutamate-rich WD repeat containing 1##BC047351|GRWD1|83743|glutamate-rich WD repeat containing 1	0.882698	CTCF.p2:-50:0.867
chr20	48429034	48429100	reg1040395.p1	3.791	+	TSC_hg19_v1_chr20_-_48330471 NM_004776	-98601	-	AB004550 TSC_hg19_v1_chr20_-_48330359	-98711	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	-98837	-	NM_015266 TSC_hg19_v1_chr20_+_48429364 AK300318	241	+	CR749638 TSC_hg19_v1_chr20_+_48429436 AB023156 BC112213 AK295803 AK308328 AK131001 AK295665 AK310530 AK295822	351	+	AK289644 NM_001135773	101208	-	NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_015266|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK300318|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##CR749638|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AB023156|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##BC112213|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295803|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK308328|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK131001|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295665|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK310530|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295822|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK289644|SPATA2|9825|spermatogenesis associated 2##NM_001135773|SPATA2|9825|spermatogenesis associated 2	0.0	
chr20	9196366	9196458	reg1039555.p2	3.791	+	AK307482 TSC_hg19_v1_chr20_+_9049806	-146614	+	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	-146729	+	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	-1083382	+	NM_182797 BC117458 BC143868	1646	+	NM_000933 AB384821	92041	+	TSC_hg19_v1_chr20_+_9458460 AK057634	262101	+	AK307482|PLCB4|5332|phospholipase C, beta 4##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4##NM_000933|PLCB4|5332|phospholipase C, beta 4##AK057634|PLCB4|5332|phospholipase C, beta 4	0.167507	
chr21	46327926	46328022	reg1030476.p2	3.791	+	TSC_hg19_v1_chr21_+_46293937 BC092510	-34014	+	TSC_hg19_v1_chr21_-_46293609 AK315626 AK299204 AF149785 NM_004339	-34261	-	TSC_hg19_v1_chr21_-_46293607 BC012858 AK298557	-34371	-	TSC_hg19_v1_chr21_-_46340815 L78790 AK303488 M15395 AK128344	12823	-	AK222505 TSC_hg19_v1_chr21_-_46340824	12857	-	AB208909 TSC_hg19_v1_chr21_-_46340890 NM_000211	12945	-	AK315626|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AK299204|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AF149785|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##NM_004339|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##BC012858|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##AK298557|PTTG1IP|754|pituitary tumor-transforming 1 interacting protein##L78790|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK303488|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##M15395|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK128344|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AK222505|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##AB208909|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)##NM_000211|ITGB2|3689|integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)	0.0	
chr2	70871023	70871092	reg1030214.p1	3.791	+	NM_001099691 NM_003236	-89911	-	AK309220 AK309066 CU675103 BT006833 AF149096 AF149097 AF149098 X70340 K03222 M31172 AK290151 AK312899 BC005308 TSC_hg19_v1_chr2_-_70780995	-90249	-	AM393139 AB528755 AK225148 BC026293 TSC_hg19_v1_chr2_-_70529198 AL833147 BC014975 AK225151 AK309543 AK315877 AK027574 NM_032822	-341851	-	BC065525 NM_001185054	123789	-	TSC_hg19_v1_chr2_-_70995330 BC056881 BC051882 BC010237 BC041666 BC027876 AK297250 AK309773 AK291007 AB209227 AB593080 NM_001185055 NM_001617 NM_017482 NM_017488	124234	-	BC039536 AB463644 AY541030 NM_001004311	146695	-	NM_001099691|TGFA|7039|transforming growth factor, alpha##NM_003236|TGFA|7039|transforming growth factor, alpha##AK309220|TGFA|7039|transforming growth factor, alpha##AK309066|TGFA|7039|transforming growth factor, alpha##BT006833|TGFA|7039|transforming growth factor, alpha##AF149096|TGFA|7039|transforming growth factor, alpha##AF149097|TGFA|7039|transforming growth factor, alpha##AF149098|TGFA|7039|transforming growth factor, alpha##X70340|TGFA|7039|transforming growth factor, alpha##K03222|TGFA|7039|transforming growth factor, alpha##M31172|TGFA|7039|transforming growth factor, alpha##AK290151|TGFA|7039|transforming growth factor, alpha##AK312899|TGFA|7039|transforming growth factor, alpha##BC005308|TGFA|7039|transforming growth factor, alpha##AM393139|FAM136A|84908|family with sequence similarity 136, member A##AK225148|FAM136A|84908|family with sequence similarity 136, member A##BC026293|FAM136A|84908|family with sequence similarity 136, member A##AL833147|FAM136A|84908|family with sequence similarity 136, member A##BC014975|FAM136A|84908|family with sequence similarity 136, member A##AK225151|FAM136A|84908|family with sequence similarity 136, member A##AK309543|FAM136A|84908|family with sequence similarity 136, member A##AK315877|FAM136A|84908|family with sequence similarity 136, member A##AK027574|FAM136A|84908|family with sequence similarity 136, member A##NM_032822|FAM136A|84908|family with sequence similarity 136, member A##BC065525|ADD2|119|adducin 2 (beta)##NM_001185054|ADD2|119|adducin 2 (beta)##BC056881|ADD2|119|adducin 2 (beta)##BC051882|ADD2|119|adducin 2 (beta)##BC010237|ADD2|119|adducin 2 (beta)##BC041666|ADD2|119|adducin 2 (beta)##BC027876|ADD2|119|adducin 2 (beta)##AK297250|ADD2|119|adducin 2 (beta)##AK309773|ADD2|119|adducin 2 (beta)##AK291007|ADD2|119|adducin 2 (beta)##AB209227|ADD2|119|adducin 2 (beta)##AB593080|ADD2|119|adducin 2 (beta)##NM_001185055|ADD2|119|adducin 2 (beta)##NM_001617|ADD2|119|adducin 2 (beta)##NM_017482|ADD2|119|adducin 2 (beta)##NM_017488|ADD2|119|adducin 2 (beta)##BC039536|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##AY541030|FIGLA|344018|folliculogenesis specific basic helix-loop-helix##NM_001004311|FIGLA|344018|folliculogenesis specific basic helix-loop-helix	0.197486	
chr3	126935129	126935309	reg1027570.p1	3.791	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	-23225	+	AB385178 NM_032242 X87832	-227779	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-512142	+	AB037108 NM_016372	364060	-	TSC_hg19_v1_chr3_-_127309338 BC017058	374125	-	BC050711 NM_001136053 AF289568 TSC_hg19_v1_chr3_-_127309565 NM_001142646	374314	-	AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC017058|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##BC050711|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001136053|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##AF289568|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_001142646|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	0.0	
chr5	78831826	78831939	reg1032716.p2	3.791	+	BC047438 NM_004272	-22204	-	TSC_hg19_v1_chr5_+_78532339 AB590691	-299478	+	TSC_hg19_v1_chr5_+_78531933 NM_152405	-299991	+	NM_001114393 NM_001114394 NM_173797 TSC_hg19_v1_chr5_+_78908290 AL833136 BC047581	76384	+	TSC_hg19_v1_chr5_+_78908296 BC026061	76433	+	AK095818 TSC_hg19_v1_chr5_+_78908395	76539	+	BC047438|HOMER1|9456|homer homolog 1 (Drosophila)##NM_004272|HOMER1|9456|homer homolog 1 (Drosophila)##NM_152405|JMY|133746|junction mediating and regulatory protein, p53 cofactor##NM_001114393|PAPD4|167153|PAP associated domain containing 4##NM_001114394|PAPD4|167153|PAP associated domain containing 4##NM_173797|PAPD4|167153|PAP associated domain containing 4##AL833136|PAPD4|167153|PAP associated domain containing 4##BC047581|PAPD4|167153|PAP associated domain containing 4##BC026061|PAPD4|167153|PAP associated domain containing 4##AK095818|PAPD4|167153|PAP associated domain containing 4	0.049454	
chr5	88604763	88604938	reg1024253.p2	3.791	+	AL833268 AL833274 NM_001131005 NM_001193347	-404956	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-419586	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-419730	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	1100689	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1165332	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1165728	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr6	124246656	124246747	reg1034629.p1	3.791	+	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	-121497	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	-288612	-	BC101377 BC101376 NM_001010852	-929121	+	AK093417 AX748113 BC026087 NM_152553	1057810	+	TSC_hg19_v1_chr6_+_125474909 NM_001003396 NM_001003397 NM_003287 AK291866 U44427 BC002375 AK291872 AF208012 AK291887	1228238	+	AK124817 NM_001003395	1228675	+	NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217##NM_001003396|TPD52L1|7164|tumor protein D52-like 1##NM_001003397|TPD52L1|7164|tumor protein D52-like 1##NM_003287|TPD52L1|7164|tumor protein D52-like 1##AK291866|TPD52L1|7164|tumor protein D52-like 1##U44427|TPD52L1|7164|tumor protein D52-like 1##BC002375|TPD52L1|7164|tumor protein D52-like 1##AK291872|TPD52L1|7164|tumor protein D52-like 1##AF208012|TPD52L1|7164|tumor protein D52-like 1##AK291887|TPD52L1|7164|tumor protein D52-like 1##AK124817|TPD52L1|7164|tumor protein D52-like 1##NM_001003395|TPD52L1|7164|tumor protein D52-like 1	0.0	
chr7	127744678	127744858	reg1036546.p2	3.791	+	BC111561 BC111745 AF196976 AJ297858 NM_022143 AK172751 TSC_hg19_v1_chr7_-_127671066 AK314047	-73732	-	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	-452432	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	-452532	+	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	136565	+	CU680694 TSC_hg19_v1_chr7_-_127983862	239086	-	TSC_hg19_v1_chr7_-_127983944 BC013889 AK222716 AK300500 AK295976 AK001239 NM_001166135 NM_018077	239168	-	BC111561|LRRC4|64101|leucine rich repeat containing 4##BC111745|LRRC4|64101|leucine rich repeat containing 4##AF196976|LRRC4|64101|leucine rich repeat containing 4##AJ297858|LRRC4|64101|leucine rich repeat containing 4##NM_022143|LRRC4|64101|leucine rich repeat containing 4##AK172751|LRRC4|64101|leucine rich repeat containing 4##AK314047|LRRC4|64101|leucine rich repeat containing 4##BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin##BC013889|RBM28|55131|RNA binding motif protein 28##AK222716|RBM28|55131|RNA binding motif protein 28##AK300500|RBM28|55131|RNA binding motif protein 28##AK001239|RBM28|55131|RNA binding motif protein 28##NM_001166135|RBM28|55131|RNA binding motif protein 28##NM_018077|RBM28|55131|RNA binding motif protein 28	0.024869	
chr8	101225337	101225407	reg1035173.p2	3.791	+	TSC_hg19_v1_chr8_+_101170522 NM_003114 AF311312	-54790	+	TSC_hg19_v1_chr8_+_101170231 AK057482 NM_172218 BC055091	-55109	+	BC018157 NM_005034 TSC_hg19_v1_chr8_+_101162863 BC000806 Z47727	-62495	+	AB271913 AB271914 AB029316 NM_015435	90099	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	96809	-	TSC_hg19_v1_chr8_-_101322306 NM_183419	96913	-	NM_003114|SPAG1|6674|sperm associated antigen 1##AF311312|SPAG1|6674|sperm associated antigen 1##AK057482|SPAG1|6674|sperm associated antigen 1##NM_172218|SPAG1|6674|sperm associated antigen 1##BC055091|SPAG1|6674|sperm associated antigen 1##BC018157|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##NM_005034|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##BC000806|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##Z47727|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##NM_183419|RNF19A|25897|ring finger protein 19A	0.062812	
chr8	80652817	80652898	reg1042202.p2	3.791	+	AK292737 TSC_hg19_v1_chr8_+_80523376 BC006302 S82024 AB528346 BT020034 CR456833 DQ892719 DQ895968 CU675343	-129454	+	TSC_hg19_v1_chr8_+_80523354 AK297594 AK308557 AK297485	-129498	+	AK299500 TSC_hg19_v1_chr8_+_80523339	-129518	+	AF311883 BT020065 AB489173 CU674904 AF151522 AF176422 AJ272214 BC001873 AK074641 AK313271 AF232239 TSC_hg19_v1_chr8_-_80680006 AK092437 AK226041 AF254637 NM_001040708 NM_012258	27140	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	289645	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	340172	-	AK292737|STMN2|11075|stathmin-like 2##BC006302|STMN2|11075|stathmin-like 2##S82024|STMN2|11075|stathmin-like 2##BT020034|STMN2|11075|stathmin-like 2##CR456833|STMN2|11075|stathmin-like 2##DQ892719|STMN2|11075|stathmin-like 2##DQ895968|STMN2|11075|stathmin-like 2##AK297594|STMN2|11075|stathmin-like 2##AK308557|STMN2|11075|stathmin-like 2##AK297485|STMN2|11075|stathmin-like 2##AK299500|STMN2|11075|stathmin-like 2##AF311883|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BT020065|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF151522|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF176422|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AJ272214|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##BC001873|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK074641|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK313271|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF232239|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK092437|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AK226041|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF254637|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_001040708|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##NM_012258|HEY1|23462|hairy/enhancer-of-split related with YRPW motif 1##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52	0.0	
chr12	56754189	56754331	reg1036616.p2	3.790	+	TSC_hg19_v1_chr12_-_56753946 AK316516 AK295052 AK295114 NM_005419 NM_198332	-284	-	TSC_hg19_v1_chr12_-_56753912 AK308051	-347	-	BC051284 M97934 TSC_hg19_v1_chr12_-_56753892 AK310727 AK296939 AK296940	-377	-	CU693184 L27050 AK314892 BC026257 NM_001638 CR936663	2306	-	TSC_hg19_v1_chr12_-_56843191 BC031514 AF098162 AK296869 BC039842 NM_003920	88933	-	HQ258134 BC074913 BC117474 NM_012064	94156	-	AK316516|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK295052|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK295114|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##NM_005419|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##NM_198332|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK308051|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##BC051284|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##M97934|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK310727|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK296939|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK296940|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##L27050|APOF|319|apolipoprotein F##AK314892|APOF|319|apolipoprotein F##BC026257|APOF|319|apolipoprotein F##NM_001638|APOF|319|apolipoprotein F##CR936663|APOF|319|apolipoprotein F##BC031514|TIMELESS|8914|timeless homolog (Drosophila)##AF098162|TIMELESS|8914|timeless homolog (Drosophila)##AK296869|TIMELESS|8914|timeless homolog (Drosophila)##BC039842|TIMELESS|8914|timeless homolog (Drosophila)##NM_003920|TIMELESS|8914|timeless homolog (Drosophila)##HQ258134|MIP|4284|major intrinsic protein of lens fiber##BC074913|MIP|4284|major intrinsic protein of lens fiber##BC117474|MIP|4284|major intrinsic protein of lens fiber##NM_012064|MIP|4284|major intrinsic protein of lens fiber	0.0	
chr16	1877013	1877152	reg1035921.p1	3.790	+	TSC_hg19_v1_chr16_-_1876812 AK308825 BC000840 AK299173 AK298174 AK299993	-254	-	TSC_hg19_v1_chr16_-_1876574 AK290155	-508	-	AB464593 DQ891534 DQ894723 AK292182 AK313198 M86826 AK315808 AK309598 AK303146 BC025681 NM_001146006 NM_004970	-33390	-	BC002627 AY576804 NM_001040427 NM_005326	85	-	TSC_hg19_v1_chr16_+_1877223 BC063017 AL136720 NM_001018104 NM_001142398 NM_031208 AK094199 AB528126 AM392782 CR533499 CU687630	165	+	TSC_hg19_v1_chr16_-_1922086 NM_152764	45008	-	AK308825|HAGH|3029|hydroxyacylglutathione hydrolase##BC000840|HAGH|3029|hydroxyacylglutathione hydrolase##AK299173|HAGH|3029|hydroxyacylglutathione hydrolase##AK298174|HAGH|3029|hydroxyacylglutathione hydrolase##AK299993|HAGH|3029|hydroxyacylglutathione hydrolase##AK290155|HAGH|3029|hydroxyacylglutathione hydrolase##DQ891534|IGFALS|3483|insulin-like growth factor binding protein, acid labile subunit##DQ894723|IGFALS|3483|insulin-like growth factor binding protein, acid labile subunit##AK292182|IGFALS|3483|insulin-like growth factor binding protein, acid labile subunit##AK313198|IGFALS|3483|insulin-like growth factor binding protein, acid labile subunit##M86826|IGFALS|3483|insulin-like growth factor binding protein, acid labile subunit##AK315808|IGFALS|3483|insulin-like growth factor binding protein, acid labile subunit##AK303146|IGFALS|3483|insulin-like growth factor binding protein, acid labile subunit##BC025681|IGFALS|3483|insulin-like growth factor binding protein, acid labile subunit##NM_001146006|IGFALS|3483|insulin-like growth factor binding protein, acid labile subunit##NM_004970|IGFALS|3483|insulin-like growth factor binding protein, acid labile subunit##BC002627|HAGH|3029|hydroxyacylglutathione hydrolase##AY576804|HAGH|3029|hydroxyacylglutathione hydrolase##NM_001040427|HAGH|3029|hydroxyacylglutathione hydrolase##NM_005326|HAGH|3029|hydroxyacylglutathione hydrolase##BC063017|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##AL136720|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##NM_001018104|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##NM_001142398|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##NM_031208|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##AK094199|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##AM392782|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##CR533499|FAHD1|81889|fumarylacetoacetate hydrolase domain containing 1##NM_152764|C16orf73|254528|chromosome 16 open reading frame 73	0.0	
chr17	655895	656039	reg1017703.p2	3.790	+	TSC_hg19_v1_chr17_-_655502 NM_015721	-482	-	TSC_hg19_v1_chr17_-_655412 AB463052 AF173856 BC036024 AK302722 BC032084 BC020062	-547	-	TSC_hg19_v1_chr17_+_635806 AF477201 BC026023 AK025935 AK292065 NM_024792 CU693104 AK125146	-20181	+	TSC_hg19_v1_chr17_-_685521 AK226083 AK292315 BC008605 CU677471 AK296584 AF061730 AF177342 AK301751 BC010902 BC015848 AK001488 AF177343 NM_016080	29513	-	AF177344 NM_018146 TSC_hg19_v1_chr17_+_685592 AK001443 AK222900	29591	+	BC011550 TSC_hg19_v1_chr17_+_685611 BC050614 AK225128 AB590841 CU679954 CU690740	29647	+	NM_015721|GEMIN4|50628|gem (nuclear organelle) associated protein 4##AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4##AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4##AF477201|FAM57A|79850|family with sequence similarity 57, member A##BC026023|FAM57A|79850|family with sequence similarity 57, member A##AK025935|FAM57A|79850|family with sequence similarity 57, member A##AK292065|FAM57A|79850|family with sequence similarity 57, member A##NM_024792|FAM57A|79850|family with sequence similarity 57, member A##AK125146|FAM57A|79850|family with sequence similarity 57, member A##AK226083|GLOD4|51031|glyoxalase domain containing 4##AK292315|GLOD4|51031|glyoxalase domain containing 4##BC008605|GLOD4|51031|glyoxalase domain containing 4##AK296584|GLOD4|51031|glyoxalase domain containing 4##AF061730|GLOD4|51031|glyoxalase domain containing 4##AF177342|GLOD4|51031|glyoxalase domain containing 4##AK301751|GLOD4|51031|glyoxalase domain containing 4##BC010902|GLOD4|51031|glyoxalase domain containing 4##BC015848|GLOD4|51031|glyoxalase domain containing 4##AK001488|GLOD4|51031|glyoxalase domain containing 4##AF177343|GLOD4|51031|glyoxalase domain containing 4##NM_016080|GLOD4|51031|glyoxalase domain containing 4##AF177344|RNMTL1|55178|RNA methyltransferase like 1##NM_018146|RNMTL1|55178|RNA methyltransferase like 1##AK001443|RNMTL1|55178|RNA methyltransferase like 1##AK222900|RNMTL1|55178|RNA methyltransferase like 1##BC011550|RNMTL1|55178|RNA methyltransferase like 1##BC050614|RNMTL1|55178|RNA methyltransferase like 1##AK225128|RNMTL1|55178|RNA methyltransferase like 1	0.270465	CTCF.p2:-75:0.270
chr19	59055807	59055929	reg1031644.p2	3.790	+	TSC_hg19_v1_chr19_+_59055826 AK225760 BC004978 NM_005762 BC052986	-36	+	TSC_hg19_v1_chr19_-_59031178 AK130056 AK027392	-24680	-	BC024738 NM_032792 TSC_hg19_v1_chr19_-_59030968	-24915	-	TSC_hg19_v1_chr19_+_59055881 U95040	20	+	U78773 TSC_hg19_v1_chr19_+_59056118 AK313478 AB385179	202	+	TSC_hg19_v1_chr19_-_59066342 BC002502	10457	-	AK225760|TRIM28|10155|tripartite motif containing 28##BC004978|TRIM28|10155|tripartite motif containing 28##NM_005762|TRIM28|10155|tripartite motif containing 28##BC052986|TRIM28|10155|tripartite motif containing 28##AK027392|ZBTB45|84878|zinc finger and BTB domain containing 45##BC024738|ZBTB45|84878|zinc finger and BTB domain containing 45##NM_032792|ZBTB45|84878|zinc finger and BTB domain containing 45##U95040|TRIM28|10155|tripartite motif containing 28##U78773|TRIM28|10155|tripartite motif containing 28##AK313478|TRIM28|10155|tripartite motif containing 28##BC002502|CHMP2A|27243|charged multivesicular body protein 2A	0.0	
chr21	17566704	17566884	reg1036051.p1	3.790	+	TSC_hg19_v1_chr21_+_17102383 NM_013396 AF134213 BC015930 CU677515 CU687288 FJ763652	-464253	+	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	-464469	+	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	-1129577	-	TSC_hg19_v1_chr21_+_18885168 NM_001207063 NM_001207064 NM_001207065 NM_001207066 NM_001338	1318369	+	TSC_hg19_v1_chr21_+_18885364 BC003684 AK313526 BC010536 Y07593 DQ891181 DQ894363 AF124598 AY072910 AY072911 AY072912 BT019876 GU474812 U90716	1318577	+	D64110 TSC_hg19_v1_chr21_-_18985177 BC011957	1418346	-	NM_013396|USP25|29761|ubiquitin specific peptidase 25##AF134213|USP25|29761|ubiquitin specific peptidase 25##BC015930|USP25|29761|ubiquitin specific peptidase 25##FJ763652|USP25|29761|ubiquitin specific peptidase 25##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##NM_001207063|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207064|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207065|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001207066|CXADR|1525|coxsackie virus and adenovirus receptor##NM_001338|CXADR|1525|coxsackie virus and adenovirus receptor##BC003684|CXADR|1525|coxsackie virus and adenovirus receptor##AK313526|CXADR|1525|coxsackie virus and adenovirus receptor##BC010536|CXADR|1525|coxsackie virus and adenovirus receptor##Y07593|CXADR|1525|coxsackie virus and adenovirus receptor##DQ891181|CXADR|1525|coxsackie virus and adenovirus receptor##DQ894363|CXADR|1525|coxsackie virus and adenovirus receptor##AF124598|CXADR|1525|coxsackie virus and adenovirus receptor##AY072910|CXADR|1525|coxsackie virus and adenovirus receptor##AY072911|CXADR|1525|coxsackie virus and adenovirus receptor##AY072912|CXADR|1525|coxsackie virus and adenovirus receptor##BT019876|CXADR|1525|coxsackie virus and adenovirus receptor##GU474812|CXADR|1525|coxsackie virus and adenovirus receptor##U90716|CXADR|1525|coxsackie virus and adenovirus receptor##D64110|BTG3|10950|BTG family, member 3##BC011957|BTG3|10950|BTG family, member 3	0.178245	
chr21	44013282	44013462	reg1011316.p1	3.790	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	-79369	+	AJ269529 NM_018964	-93631	+	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	-96992	-	TSC_hg19_v1_chr21_+_44073730 NM_001001567 NM_001001568 NM_001001569 NM_001001570 NM_001001571 NM_001001572 NM_001001573 NM_001001574 NM_001001575 NM_001001576 NM_001001577 NM_001001578 NM_001001579 NM_001001580 NM_001001581 NM_001001582 NM_001001583 NM_001001584 NM_001001585 NM_002606 AF048837 AY701187 BC009047 AK314679 AY196299 AY196300 AY196301 AY196302 AY196303 AY196304 AY196305 AY196306 AY196307 AY196308 AY196309 AY196310 AY196311 AY196312 AY196313 AY196314 AK001307 AK294112 AF067223 AF067224 AF067225 AF067226 AB527758 AY242121 BT007016 GQ129331 GQ129332	60415	+	AB590172 CU675357 DQ892967 DQ896215 TSC_hg19_v1_chr21_-_44299643 AK292923 AK315008 AJ243912 AJ243913 BC006341	286252	-	TSC_hg19_v1_chr21_-_44299690 BC001074 NM_018669 NM_033661 AK298015	286312	-	BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_001001567|PDE9A|5152|phosphodiesterase 9A##NM_001001568|PDE9A|5152|phosphodiesterase 9A##NM_001001569|PDE9A|5152|phosphodiesterase 9A##NM_001001570|PDE9A|5152|phosphodiesterase 9A##NM_001001571|PDE9A|5152|phosphodiesterase 9A##NM_001001572|PDE9A|5152|phosphodiesterase 9A##NM_001001573|PDE9A|5152|phosphodiesterase 9A##NM_001001574|PDE9A|5152|phosphodiesterase 9A##NM_001001575|PDE9A|5152|phosphodiesterase 9A##NM_001001576|PDE9A|5152|phosphodiesterase 9A##NM_001001577|PDE9A|5152|phosphodiesterase 9A##NM_001001578|PDE9A|5152|phosphodiesterase 9A##NM_001001579|PDE9A|5152|phosphodiesterase 9A##NM_001001580|PDE9A|5152|phosphodiesterase 9A##NM_001001581|PDE9A|5152|phosphodiesterase 9A##NM_001001582|PDE9A|5152|phosphodiesterase 9A##NM_001001583|PDE9A|5152|phosphodiesterase 9A##NM_001001584|PDE9A|5152|phosphodiesterase 9A##NM_001001585|PDE9A|5152|phosphodiesterase 9A##NM_002606|PDE9A|5152|phosphodiesterase 9A##AF048837|PDE9A|5152|phosphodiesterase 9A##AY701187|PDE9A|5152|phosphodiesterase 9A##BC009047|PDE9A|5152|phosphodiesterase 9A##AK314679|PDE9A|5152|phosphodiesterase 9A##AY196299|PDE9A|5152|phosphodiesterase 9A##AY196300|PDE9A|5152|phosphodiesterase 9A##AY196301|PDE9A|5152|phosphodiesterase 9A##AY196302|PDE9A|5152|phosphodiesterase 9A##AY196303|PDE9A|5152|phosphodiesterase 9A##AY196304|PDE9A|5152|phosphodiesterase 9A##AY196305|PDE9A|5152|phosphodiesterase 9A##AY196306|PDE9A|5152|phosphodiesterase 9A##AY196307|PDE9A|5152|phosphodiesterase 9A##AY196308|PDE9A|5152|phosphodiesterase 9A##AY196309|PDE9A|5152|phosphodiesterase 9A##AY196310|PDE9A|5152|phosphodiesterase 9A##AY196311|PDE9A|5152|phosphodiesterase 9A##AY196312|PDE9A|5152|phosphodiesterase 9A##AY196313|PDE9A|5152|phosphodiesterase 9A##AY196314|PDE9A|5152|phosphodiesterase 9A##AK001307|PDE9A|5152|phosphodiesterase 9A##AK294112|PDE9A|5152|phosphodiesterase 9A##AF067223|PDE9A|5152|phosphodiesterase 9A##AF067224|PDE9A|5152|phosphodiesterase 9A##AF067225|PDE9A|5152|phosphodiesterase 9A##AF067226|PDE9A|5152|phosphodiesterase 9A##AY242121|PDE9A|5152|phosphodiesterase 9A##BT007016|PDE9A|5152|phosphodiesterase 9A##GQ129331|PDE9A|5152|phosphodiesterase 9A##GQ129332|PDE9A|5152|phosphodiesterase 9A##DQ892967|WDR4|10785|WD repeat domain 4##DQ896215|WDR4|10785|WD repeat domain 4##AK292923|WDR4|10785|WD repeat domain 4##AK315008|WDR4|10785|WD repeat domain 4##AJ243912|WDR4|10785|WD repeat domain 4##AJ243913|WDR4|10785|WD repeat domain 4##BC006341|WDR4|10785|WD repeat domain 4##BC001074|WDR4|10785|WD repeat domain 4##NM_018669|WDR4|10785|WD repeat domain 4##NM_033661|WDR4|10785|WD repeat domain 4##AK298015|WDR4|10785|WD repeat domain 4	0.0	
chr2	6493910	6494017	reg1037179.p2	3.790	+	U23752 AB028641 NM_003108 BC025789 AB464713	-661148	+	AK302299 NM_018436 BC029652	-2788166	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-2851394	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	511937	-	TSC_hg19_v1_chr2_-_7006650 AK308509	512740	-	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	523900	+	U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2	0.0	
chr8	73559947	73560104	reg1038534.p1	3.790	+	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	-110382	+	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	-572191	-	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-803317	-	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	361087	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	445417	-	BC150551 BC150552 NM_001243237	611711	-	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84##BC150551|LOC100130301|100130301|uncharacterized LOC100130301##BC150552|LOC100130301|100130301|uncharacterized LOC100130301##NM_001243237|LOC100130301|100130301|uncharacterized LOC100130301	0.106179	
chr8	8254521	8254587	reg1029031.p1	3.790	+	AK122582 NM_001080826	-15332	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-78666	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-168412	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	305144	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	496384	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	605811	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.0	
chr9	4927107	4927229	reg1032065.p1	3.790	+	TSC_hg19_v1_chr9_+_4839769 EF553527	-87400	+	TSC_hg19_v1_chr9_+_4792995 AJ276894 EU831474 EU831561 AF067172	-134125	+	TSC_hg19_v1_chr9_+_4792936 AK022904 BC001025 AK225872	-134245	+	TSC_hg19_v1_chr9_+_4985085 AK292525	57919	+	TSC_hg19_v1_chr9_+_4985271 AF005216 NM_004972 AF058925	58091	+	AF135824 HQ258002 AF156094 NM_007179 BC126473 BC126475	258445	-	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1##AJ276894|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831474|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831561|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF067172|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK022904|RCL1|10171|RNA terminal phosphate cyclase-like 1##BC001025|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK225872|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK292525|JAK2|3717|Janus kinase 2##AF005216|JAK2|3717|Janus kinase 2##NM_004972|JAK2|3717|Janus kinase 2##AF058925|JAK2|3717|Janus kinase 2##AF135824|INSL6|11172|insulin-like 6##HQ258002|INSL6|11172|insulin-like 6##AF156094|INSL6|11172|insulin-like 6##NM_007179|INSL6|11172|insulin-like 6##BC126473|INSL6|11172|insulin-like 6##BC126475|INSL6|11172|insulin-like 6	0.0	
chrX	39674777	39674856	reg1034103.p1	3.790	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-1011276	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-1011356	+	BC008908 NM_021242	-1011744	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	281876	-	BC114220 NM_001123383 NM_001123384	361765	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	765370	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.0	
chrX	55453651	55453770	reg1041747.p2	3.790	+	BC009230 NM_130467 NM_001013435 AJ344352 BC110803	-206893	+	NM_001190708	-244767	-	TSC_hg19_v1_chrX_-_55187619 NM_001166702 BC006406 BC000919 BC017571 AK000441 AK311699 NM_001166699 NM_001166700 NM_001166701 NM_001166704 NM_138362	-266114	-	AF143235 NM_014061 TSC_hg19_v1_chrX_+_55478594 BC011954 AF320912 AK313527	24863	+	NM_201286 BC035907	61922	-	BC012934 NM_198451	196122	+	BC009230|PAGE5|90737|P antigen family, member 5 (prostate associated)##NM_130467|PAGE5|90737|P antigen family, member 5 (prostate associated)##NM_001013435|PAGE5|90737|P antigen family, member 5 (prostate associated)##AJ344352|PAGE5|90737|P antigen family, member 5 (prostate associated)##BC110803|PAGE5|90737|P antigen family, member 5 (prostate associated)##NM_001190708|MTRNR2L10|100463488|MT-RNR2-like 10##NM_001166702|FAM104B|90736|family with sequence similarity 104, member B##BC006406|FAM104B|90736|family with sequence similarity 104, member B##BC000919|FAM104B|90736|family with sequence similarity 104, member B##BC017571|FAM104B|90736|family with sequence similarity 104, member B##AK000441|FAM104B|90736|family with sequence similarity 104, member B##AK311699|FAM104B|90736|family with sequence similarity 104, member B##NM_001166699|FAM104B|90736|family with sequence similarity 104, member B##NM_001166700|FAM104B|90736|family with sequence similarity 104, member B##NM_001166701|FAM104B|90736|family with sequence similarity 104, member B##NM_001166704|FAM104B|90736|family with sequence similarity 104, member B##NM_138362|FAM104B|90736|family with sequence similarity 104, member B##AF143235|MAGEH1|28986|melanoma antigen family H, 1##NM_014061|MAGEH1|28986|melanoma antigen family H, 1##BC011954|MAGEH1|28986|melanoma antigen family H, 1##AF320912|MAGEH1|28986|melanoma antigen family H, 1##AK313527|MAGEH1|28986|melanoma antigen family H, 1##NM_201286|USP51|158880|ubiquitin specific peptidase 51##BC035907|USP51|158880|ubiquitin specific peptidase 51##BC012934|FOXR2|139628|forkhead box R2##NM_198451|FOXR2|139628|forkhead box R2	0.958724	CTCF.p2:1:0.959
chr1	204482369	204482453	reg1033393.p2	3.789	+	TSC_hg19_v1_chr1_-_204463934 BC094741	-18646	-	BC132876 BC136645 BC144342 NM_002646 AK308153	-22913	-	TSC_hg19_v1_chr1_-_204380946 BC065280 AK222877 NM_032833 AK027650 AK303535 AK316092	-101471	-	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	3091	+	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	3199	+	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	172180	-	BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC132876|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC136645|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC144342|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_002646|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AK308153|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC065280|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK222877|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_032833|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK027650|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK303535|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2	0.0	
chr1	53308376	53308474	reg1033148.p1	3.789	+	AY271826 NM_001004339	-243	+	TSC_hg19_v1_chr1_-_53238345 D28429	-70082	-	TSC_hg19_v1_chr1_+_53192124 AK296460 NM_024646 AB051517	-116307	+	TSC_hg19_v1_chr1_-_53387217 AK300896 AK299834	78802	-	TSC_hg19_v1_chr1_-_53387399 CU692200 BC038389 BC044574 AK315906 AK310650 AK001810	78944	-	TSC_hg19_v1_chr1_-_53387413 BC051887 BC040480 NM_001198961 NM_001198962 NM_018281 AK309535	79068	-	AY271826|ZYG11A|440590|zyg-11 homolog A (C. elegans)##NM_001004339|ZYG11A|440590|zyg-11 homolog A (C. elegans)##AK296460|ZYG11B|79699|zyg-11 homolog B (C. elegans)##NM_024646|ZYG11B|79699|zyg-11 homolog B (C. elegans)##AB051517|ZYG11B|79699|zyg-11 homolog B (C. elegans)##AK300896|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK299834|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC038389|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC044574|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK315906|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK310650|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK001810|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC051887|ECHDC2|55268|enoyl CoA hydratase domain containing 2##BC040480|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_001198961|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_001198962|ECHDC2|55268|enoyl CoA hydratase domain containing 2##NM_018281|ECHDC2|55268|enoyl CoA hydratase domain containing 2##AK309535|ECHDC2|55268|enoyl CoA hydratase domain containing 2	0.170687	
chr17	55082472	55082555	reg1038457.p1	3.789	+	NM_021626 TSC_hg19_v1_chr17_+_55055513 AY358559 AF282618 AK027373 BC010078 AK298161 CU687218 BC072405 AF113214	-27009	+	CU679689 DQ892927 DQ896176 TSC_hg19_v1_chr17_-_55038404 AK313616 U06632 BC010385 NM_004645	-44112	-	TSC_hg19_v1_chr17_-_54991410 NM_005082	-91108	-	TSC_hg19_v1_chr17_+_55162639 NM_003488 BC000729 X97335	80101	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	80630	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	251460	+	NM_021626|SCPEP1|59342|serine carboxypeptidase 1##AY358559|SCPEP1|59342|serine carboxypeptidase 1##AF282618|SCPEP1|59342|serine carboxypeptidase 1##AK027373|SCPEP1|59342|serine carboxypeptidase 1##BC010078|SCPEP1|59342|serine carboxypeptidase 1##AK298161|SCPEP1|59342|serine carboxypeptidase 1##BC072405|SCPEP1|59342|serine carboxypeptidase 1##AF113214|SCPEP1|59342|serine carboxypeptidase 1##DQ892927|COIL|8161|coilin##DQ896176|COIL|8161|coilin##AK313616|COIL|8161|coilin##U06632|COIL|8161|coilin##BC010385|COIL|8161|coilin##NM_004645|COIL|8161|coilin##NM_005082|TRIM25|7706|tripartite motif containing 25##NM_003488|AKAP1|8165|A kinase (PRKA) anchor protein 1##BC000729|AKAP1|8165|A kinase (PRKA) anchor protein 1##X97335|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)	0.832201	CTCF.p2:31:0.832
chr20	305145	305234	reg1036329.p1	3.789	+	TSC_hg19_v1_chr20_+_278213 BC069238 NM_033089 AK025768 BC107584 BC036469	-26980	+	AK302223 TSC_hg19_v1_chr20_-_271367 BC134417 BC137450 BC144648 BC144649 AK097394 NM_080571 NM_153269	-33825	-	TSC_hg19_v1_chr20_-_271080 AK091924 AX747257 AK304526 BX640715 BC051762	-34115	-	TSC_hg19_v1_chr20_+_306226 BC067361 NM_006943 U35612 BC028103	1047	+	TSC_hg19_v1_chr20_+_327371 NM_024958 AK290527	22216	+	TSC_hg19_v1_chr20_+_327754 AK026982	22560	+	BC069238|ZCCHC3|85364|zinc finger, CCHC domain containing 3##NM_033089|ZCCHC3|85364|zinc finger, CCHC domain containing 3##AK025768|ZCCHC3|85364|zinc finger, CCHC domain containing 3##BC107584|ZCCHC3|85364|zinc finger, CCHC domain containing 3##BC036469|ZCCHC3|85364|zinc finger, CCHC domain containing 3##AK302223|C20orf96|140680|chromosome 20 open reading frame 96##BC134417|C20orf96|140680|chromosome 20 open reading frame 96##BC137450|C20orf96|140680|chromosome 20 open reading frame 96##BC144648|C20orf96|140680|chromosome 20 open reading frame 96##BC144649|C20orf96|140680|chromosome 20 open reading frame 96##AK097394|C20orf96|140680|chromosome 20 open reading frame 96##NM_080571|C20orf96|140680|chromosome 20 open reading frame 96##NM_153269|C20orf96|140680|chromosome 20 open reading frame 96##AK091924|C20orf96|140680|chromosome 20 open reading frame 96##AK304526|C20orf96|140680|chromosome 20 open reading frame 96##BX640715|C20orf96|140680|chromosome 20 open reading frame 96##BC051762|C20orf96|140680|chromosome 20 open reading frame 96##BC067361|SOX12|6666|SRY (sex determining region Y)-box 12##NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12##U35612|SOX12|6666|SRY (sex determining region Y)-box 12##BC028103|SOX12|6666|SRY (sex determining region Y)-box 12##NM_024958|NRSN2|80023|neurensin 2##AK290527|NRSN2|80023|neurensin 2##AK026982|NRSN2|80023|neurensin 2	0.0	
chr1	226425779	226425845	reg1043330.p1	3.788	+	BC111974 BC113441 BC143784 TSC_hg19_v1_chr1_+_226411364 AF211891 NM_031944	-14462	+	AY150218 TSC_hg19_v1_chr1_-_226374401 BC045533 BC060792 NM_022735 AK025520 AK314468 AB043587	-51395	-	BC039575 TSC_hg19_v1_chr1_-_226374400	-51412	-	TSC_hg19_v1_chr1_-_226496839 AY786184 BC043444 BX537869 AK126177 AF190323 AF190324 AK308823	71084	-	BC045625 NM_173083	71385	-	TSC_hg19_v1_chr1_-_226497442 AY166859 BC065302 AY166858	71680	-	BC111974|MIXL1|83881|Mix paired-like homeobox##BC113441|MIXL1|83881|Mix paired-like homeobox##BC143784|MIXL1|83881|Mix paired-like homeobox##AF211891|MIXL1|83881|Mix paired-like homeobox##NM_031944|MIXL1|83881|Mix paired-like homeobox##AY150218|ACBD3|64746|acyl-CoA binding domain containing 3##BC045533|ACBD3|64746|acyl-CoA binding domain containing 3##BC060792|ACBD3|64746|acyl-CoA binding domain containing 3##NM_022735|ACBD3|64746|acyl-CoA binding domain containing 3##AK025520|ACBD3|64746|acyl-CoA binding domain containing 3##AK314468|ACBD3|64746|acyl-CoA binding domain containing 3##AB043587|ACBD3|64746|acyl-CoA binding domain containing 3##BC039575|ACBD3|64746|acyl-CoA binding domain containing 3##AY786184|LIN9|286826|lin-9 homolog (C. elegans)##BC043444|LIN9|286826|lin-9 homolog (C. elegans)##BX537869|LIN9|286826|lin-9 homolog (C. elegans)##AK126177|LIN9|286826|lin-9 homolog (C. elegans)##AF190323|LIN9|286826|lin-9 homolog (C. elegans)##AF190324|LIN9|286826|lin-9 homolog (C. elegans)##AK308823|LIN9|286826|lin-9 homolog (C. elegans)##BC045625|LIN9|286826|lin-9 homolog (C. elegans)##NM_173083|LIN9|286826|lin-9 homolog (C. elegans)##AY166859|LIN9|286826|lin-9 homolog (C. elegans)##BC065302|LIN9|286826|lin-9 homolog (C. elegans)##AY166858|LIN9|286826|lin-9 homolog (C. elegans)	0.0	
chr13	31248046	31248216	reg1028152.p1	3.788	+	NM_005800 BC038103 TSC_hg19_v1_chr13_+_31192056 BC036027 AK289826 CR627370 X59131 BC012594 AL832776	-56168	+	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	-56504	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	-208073	-	AK314143 NM_001204406	39483	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	61533	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	61584	+	NM_005800|USPL1|10208|ubiquitin specific peptidase like 1##BC038103|USPL1|10208|ubiquitin specific peptidase like 1##BC036027|USPL1|10208|ubiquitin specific peptidase like 1##AK289826|USPL1|10208|ubiquitin specific peptidase like 1##CR627370|USPL1|10208|ubiquitin specific peptidase like 1##X59131|USPL1|10208|ubiquitin specific peptidase like 1##BC012594|USPL1|10208|ubiquitin specific peptidase like 1##AL832776|USPL1|10208|ubiquitin specific peptidase like 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein	0.0	
chr13	40600594	40600734	reg1024605.p2	3.788	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-370803	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-423302	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-423337	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	640048	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	744628	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	744668	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.0	
chr14	77422209	77422383	reg1037722.p1	3.788	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-129501	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-143034	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-143086	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	72388	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	72764	-	AK124327 TSC_hg19_v1_chr14_-_77542533	120237	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.014765	
chr16	48278068	48278189	reg1033093.p1	3.788	+	AF367202 AF411579 NM_032583 NM_145186	-9041	-	AY040219 NM_033151	-11947	-	AY196326 AY040220 NM_033226	-97508	-	TSC_hg19_v1_chr16_+_48278210 AJ548761 NM_031490	66	+	AK074775 AK127125 TSC_hg19_v1_chr16_+_48278216 BC093910 BC093912 BC143246 AK027544 AK294779	142	+	BC042550 TSC_hg19_v1_chr16_-_48399765	121632	-	AF367202|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AF411579|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_032583|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_145186|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AY040219|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##NM_033151|ABCC11|85320|ATP-binding cassette, sub-family C (CFTR/MRP), member 11##AY196326|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AY040220|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##NM_033226|ABCC12|94160|ATP-binding cassette, sub-family C (CFTR/MRP), member 12##AJ548761|LONP2|83752|lon peptidase 2, peroxisomal##NM_031490|LONP2|83752|lon peptidase 2, peroxisomal##AK074775|LONP2|83752|lon peptidase 2, peroxisomal##AK127125|LONP2|83752|lon peptidase 2, peroxisomal##BC093910|LONP2|83752|lon peptidase 2, peroxisomal##BC093912|LONP2|83752|lon peptidase 2, peroxisomal##BC143246|LONP2|83752|lon peptidase 2, peroxisomal##AK027544|LONP2|83752|lon peptidase 2, peroxisomal##AK294779|LONP2|83752|lon peptidase 2, peroxisomal##BC042550|SIAH1|6477|seven in absentia homolog 1 (Drosophila)	0.0	
chr16	85931130	85931252	reg1035668.p2	3.788	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-97856	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-97886	+	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	-97958	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	1595	+	TSC_hg19_v1_chr16_-_86542463 AK091834	611273	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	612965	+	BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1	0.289211	CTCF.p2:0:0.289
chr17	63023504	63023679	reg1031115.p1	3.788	+	TSC_hg19_v1_chr17_-_63009302 AK026902	-14285	-	TSC_hg19_v1_chr17_-_62971685 BX537538 AK056627 BC063466 AK311317	-51971	-	TSC_hg19_v1_chr17_-_62915587 AK294371	-107995	-	TSC_hg19_v1_chr17_-_63052724 AB528470 AF493902 CU691408 DQ893572 DQ894448 AK313672	29127	-	TSC_hg19_v1_chr17_-_63052756 L22075 BC036756	29169	-	BC011925 TSC_hg19_v1_chr17_-_63052851	29242	-	AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BX537538|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK056627|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##BC063466|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK311317|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AF493902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ893572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ894448|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AK313672|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##L22075|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC036756|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	0.0	
chr5	177264522	177264649	reg1036927.p1	3.788	+	AB018295 NM_173663	-57101	-	TSC_hg19_v1_chr5_-_177099217 AK297457	-165356	-	TSC_hg19_v1_chr5_+_177027143 BC007317 NM_007255 BC072403 AY358578 BC062983 AB028600 AK023506 AF142675 DQ893010 DQ896256 AB527637 AJ005382	-237431	+	AF076215 NM_006261	158657	-	TSC_hg19_v1_chr5_+_177482580 AB055766	217993	+	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	276043	+	AB018295|FAM153A|285596|family with sequence similarity 153, member A##NM_173663|FAM153A|285596|family with sequence similarity 153, member A##AK297457|LOC202181|202181|chromosome 5 open reading frame 25 pseudogene##BC007317|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##NM_007255|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC072403|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AY358578|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC062983|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AB028600|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AK023506|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF142675|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ893010|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ896256|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AJ005382|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF076215|PROP1|5626|PROP paired-like homeobox 1##NM_006261|PROP1|5626|PROP paired-like homeobox 1##AB055766|RPL19|6143|ribosomal protein L19##BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3	0.0	
chr6	26569038	26569173	reg1025762.p1	3.788	+	TSC_hg19_v1_chr6_+_26538630 NM_006353 AK311841 BC001282	-30475	+	U39576 BC096312 BC096313 BC096314 BC096315 NM_001732	-67634	+	NM_001197234 NM_007049 NM_078476 TSC_hg19_v1_chr6_+_26458182 AK297098 NM_001197233 BC016661 AB209777 U90543	-110915	+	TSC_hg19_v1_chr6_+_26597203 NM_013375 BC066313 BC048812 AB027258 AB463399 CU688138 CU690582 EU446795	28102	+	TSC_hg19_v1_chr6_-_26659967 NM_001242797 NM_001242798 NM_001242799 NM_024639	90847	-	AB591038 BC014312 TSC_hg19_v1_chr6_-_27100575 NM_021058 AK311849	531460	-	NM_006353|HMGN4|10473|high mobility group nucleosomal binding domain 4##AK311841|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC001282|HMGN4|10473|high mobility group nucleosomal binding domain 4##U39576|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096312|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096313|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096314|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096315|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001732|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001197234|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_007049|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_078476|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AK297098|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_001197233|BTN2A1|11120|butyrophilin, subfamily 2, member A1##BC016661|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AB209777|BTN2A1|11120|butyrophilin, subfamily 2, member A1##U90543|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_013375|ABT1|29777|activator of basal transcription 1##BC066313|ABT1|29777|activator of basal transcription 1##BC048812|ABT1|29777|activator of basal transcription 1##AB027258|ABT1|29777|activator of basal transcription 1##EU446795|ABT1|29777|activator of basal transcription 1##NM_001242797|ZNF322|79692|zinc finger protein 322##NM_001242798|ZNF322|79692|zinc finger protein 322##NM_001242799|ZNF322|79692|zinc finger protein 322##NM_024639|ZNF322|79692|zinc finger protein 322##BC014312|HIST1H2BJ|8970|histone cluster 1, H2bj##NM_021058|HIST1H2BJ|8970|histone cluster 1, H2bj##AK311849|HIST1H2BJ|8970|histone cluster 1, H2bj	0.0	
chrX	56804666	56804846	reg1013440.p1	3.788	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-49065	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-214705	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-545846	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	217215	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	343172	-	BC071694 NM_019003	359301	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.0	
chr10	65225127	65225290	reg1034511.p1	3.787	+	TSC_hg19_v1_chr10_+_65224979 BC007866 AK314171	-224	+	BC126403 BC143722 TSC_hg19_v1_chr10_-_65029004 BX537954 NM_004241 BC108649	-196293	-	TSC_hg19_v1_chr10_+_64893098 AF267866 AK301656 AK225257 AK225256 AY267839 AY267840 BC011707 AB590768 EU832288 EU832373	-332062	+	AK027280 EF068222 NM_032776 TSC_hg19_v1_chr10_-_65225738	470	-	BC067238 TSC_hg19_v1_chr10_-_65225775	567	-	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	55907	+	BC007866|LOC84989|84989|uncharacterized LOC84989##AK314171|LOC84989|84989|uncharacterized LOC84989##BC126403|JMJD1C|221037|jumonji domain containing 1C##BC143722|JMJD1C|221037|jumonji domain containing 1C##BX537954|JMJD1C|221037|jumonji domain containing 1C##NM_004241|JMJD1C|221037|jumonji domain containing 1C##BC108649|JMJD1C|221037|jumonji domain containing 1C##AF267866|NRBF2|29982|nuclear receptor binding factor 2##AK301656|NRBF2|29982|nuclear receptor binding factor 2##AK225257|NRBF2|29982|nuclear receptor binding factor 2##AK225256|NRBF2|29982|nuclear receptor binding factor 2##AY267839|NRBF2|29982|nuclear receptor binding factor 2##AY267840|NRBF2|29982|nuclear receptor binding factor 2##BC011707|NRBF2|29982|nuclear receptor binding factor 2##EU832288|NRBF2|29982|nuclear receptor binding factor 2##EU832373|NRBF2|29982|nuclear receptor binding factor 2##AK027280|JMJD1C|221037|jumonji domain containing 1C##EF068222|JMJD1C|221037|jumonji domain containing 1C##NM_032776|JMJD1C|221037|jumonji domain containing 1C##BC067238|JMJD1C|221037|jumonji domain containing 1C##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3	0.013473	
chr10	81947692	81947872	reg1031740.p1	3.787	+	TSC_hg19_v1_chr10_+_81892497 HQ258029 EU446996	-55277	+	BC117332 BC117334 TSC_hg19_v1_chr10_+_81892485	-55325	+	BC066348 BC090922 NM_001012973	-55525	+	BC007564 TSC_hg19_v1_chr10_-_81965258 L19605 AB209770	17411	-	TSC_hg19_v1_chr10_-_81965287 AK298362	17499	-	TSC_hg19_v1_chr10_-_81965288 AK222918	17507	-	HQ258029|PLAC9|219348|placenta-specific 9##EU446996|PLAC9|219348|placenta-specific 9##BC117332|PLAC9|219348|placenta-specific 9##BC117334|PLAC9|219348|placenta-specific 9##BC066348|PLAC9|219348|placenta-specific 9##BC090922|PLAC9|219348|placenta-specific 9##NM_001012973|PLAC9|219348|placenta-specific 9##BC007564|ANXA11|311|annexin A11##L19605|ANXA11|311|annexin A11##AB209770|ANXA11|311|annexin A11##AK298362|ANXA11|311|annexin A11##AK222918|ANXA11|311|annexin A11	0.0	
chr11	115945233	115945413	reg1023674.p3	3.787	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-570143	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-856675	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1396075	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	698375	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	713392	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	713415	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.375749	CTCF.p2:38:0.364
chr1	155178373	155178501	reg1034049.p1	3.787	+	AK223278 L38969 TSC_hg19_v1_chr1_-_155177687 AK298803 BC113846 BC113847 AK298592 AK314337 NM_001252607 NM_001252608 NM_007112	-709	-	AF125525 AY466157 X80761 S81781 AF348143 AY327582 AY327583 AY327584 AY327585 AY327586 AY327589 AY327590 AY327591 AY327592 AY327595 AY327597 AY327598 AY327599 AY327600 S81736 U60259 U60260 U60261 X52228 X52229 BC120974 BC120975 AY327587 AY327588 AY327596 EF583642 EF583643 EF583644 EF583645 EF583646 EF583647 EF583648 EF583649 EF583650 EF583651 EF583652 EF583653 EF583654 EF583655 EF583656 EF670706 EF670707 EF670708 EF670709 EF670710 EF670711 EF670712 EF670713 EF670714 EF670715 EF670716 EF670717 EF670718 EF670719 EF670720 EF670721 EF670722 EF670723 FJ226028 FJ226029 FJ226030 FJ226031 FJ226032 FJ226033 FJ226034 FJ226035 FJ226036 FJ226037 FJ226038 FJ226039 FJ226040 FJ226041 FJ226042 FJ226043 FJ226044 FJ226045 FJ226046 FJ226047 FJ226049 FJ226050 FJ226051 FJ226052 FJ226053 FJ226054 FJ226055 M32738 M32739 AK301575 M31823 TSC_hg19_v1_chr1_-_155162701 J05581 NM_001018016 NM_001018017 NM_001044390 NM_001044391 NM_001044392 NM_001044393 NM_001204285 NM_001204286 NM_001204287 NM_001204288 NM_001204289 NM_001204290 NM_001204291 NM_001204292 NM_001204293 NM_001204294 NM_001204295 NM_001204296 NM_001204297 NM_002456 J05582 Z17324 Z17325	-15768	-	TSC_hg19_v1_chr1_+_155147069 AK308075 AK308637	-31375	+	NM_002455 NM_198883 AK313863 BC001906	101	+	AK311031 TSC_hg19_v1_chr1_-_155178970	540	-	TSC_hg19_v1_chr1_+_155179028 BC035616 AX775989	589	+	AK223278|THBS3|7059|thrombospondin 3##L38969|THBS3|7059|thrombospondin 3##AK298803|THBS3|7059|thrombospondin 3##BC113846|THBS3|7059|thrombospondin 3##BC113847|THBS3|7059|thrombospondin 3##AK298592|THBS3|7059|thrombospondin 3##AK314337|THBS3|7059|thrombospondin 3##NM_001252607|THBS3|7059|thrombospondin 3##NM_001252608|THBS3|7059|thrombospondin 3##NM_007112|THBS3|7059|thrombospondin 3##AF125525|MUC1|4582|mucin 1, cell surface associated##AY466157|MUC1|4582|mucin 1, cell surface associated##X80761|MUC1|4582|mucin 1, cell surface associated##S81781|MUC1|4582|mucin 1, cell surface associated##AF348143|MUC1|4582|mucin 1, cell surface associated##AY327582|MUC1|4582|mucin 1, cell surface associated##AY327583|MUC1|4582|mucin 1, cell surface associated##AY327584|MUC1|4582|mucin 1, cell surface associated##AY327585|MUC1|4582|mucin 1, cell surface associated##AY327586|MUC1|4582|mucin 1, cell surface associated##AY327589|MUC1|4582|mucin 1, cell surface associated##AY327590|MUC1|4582|mucin 1, cell surface associated##AY327591|MUC1|4582|mucin 1, cell surface associated##AY327592|MUC1|4582|mucin 1, cell surface associated##AY327595|MUC1|4582|mucin 1, cell surface associated##AY327597|MUC1|4582|mucin 1, cell surface associated##AY327598|MUC1|4582|mucin 1, cell surface associated##AY327599|MUC1|4582|mucin 1, cell surface associated##AY327600|MUC1|4582|mucin 1, cell surface associated##S81736|MUC1|4582|mucin 1, cell surface associated##U60259|MUC1|4582|mucin 1, cell surface associated##U60260|MUC1|4582|mucin 1, cell surface associated##U60261|MUC1|4582|mucin 1, cell surface associated##X52228|MUC1|4582|mucin 1, cell surface associated##X52229|MUC1|4582|mucin 1, cell surface associated##BC120974|MUC1|4582|mucin 1, cell surface associated##BC120975|MUC1|4582|mucin 1, cell surface associated##AY327587|MUC1|4582|mucin 1, cell surface associated##AY327588|MUC1|4582|mucin 1, cell surface associated##AY327596|MUC1|4582|mucin 1, cell surface associated##EF583642|MUC1|4582|mucin 1, cell surface associated##EF583643|MUC1|4582|mucin 1, cell surface associated##EF583644|MUC1|4582|mucin 1, cell surface associated##EF583645|MUC1|4582|mucin 1, cell surface associated##EF583646|MUC1|4582|mucin 1, cell surface associated##EF583647|MUC1|4582|mucin 1, cell surface associated##EF583648|MUC1|4582|mucin 1, cell surface associated##EF583649|MUC1|4582|mucin 1, cell surface associated##EF583650|MUC1|4582|mucin 1, cell surface associated##EF583651|MUC1|4582|mucin 1, cell surface associated##EF583652|MUC1|4582|mucin 1, cell surface associated##EF583653|MUC1|4582|mucin 1, cell surface associated##EF583654|MUC1|4582|mucin 1, cell surface associated##EF583655|MUC1|4582|mucin 1, cell surface associated##EF583656|MUC1|4582|mucin 1, cell surface associated##EF670706|MUC1|4582|mucin 1, cell surface associated##EF670707|MUC1|4582|mucin 1, cell surface associated##EF670708|MUC1|4582|mucin 1, cell surface associated##EF670709|MUC1|4582|mucin 1, cell surface associated##EF670710|MUC1|4582|mucin 1, cell surface associated##EF670711|MUC1|4582|mucin 1, cell surface associated##EF670712|MUC1|4582|mucin 1, cell surface associated##EF670713|MUC1|4582|mucin 1, cell surface associated##EF670714|MUC1|4582|mucin 1, cell surface associated##EF670715|MUC1|4582|mucin 1, cell surface associated##EF670716|MUC1|4582|mucin 1, cell surface associated##EF670717|MUC1|4582|mucin 1, cell surface associated##EF670718|MUC1|4582|mucin 1, cell surface associated##EF670719|MUC1|4582|mucin 1, cell surface associated##EF670720|MUC1|4582|mucin 1, cell surface associated##EF670721|MUC1|4582|mucin 1, cell surface associated##EF670722|MUC1|4582|mucin 1, cell surface associated##EF670723|MUC1|4582|mucin 1, cell surface associated##FJ226028|MUC1|4582|mucin 1, cell surface associated##FJ226029|MUC1|4582|mucin 1, cell surface associated##FJ226030|MUC1|4582|mucin 1, cell surface associated##FJ226031|MUC1|4582|mucin 1, cell surface associated##FJ226032|MUC1|4582|mucin 1, cell surface associated##FJ226033|MUC1|4582|mucin 1, cell surface associated##FJ226034|MUC1|4582|mucin 1, cell surface associated##FJ226035|MUC1|4582|mucin 1, cell surface associated##FJ226036|MUC1|4582|mucin 1, cell surface associated##FJ226037|MUC1|4582|mucin 1, cell surface associated##FJ226038|MUC1|4582|mucin 1, cell surface associated##FJ226039|MUC1|4582|mucin 1, cell surface associated##FJ226040|MUC1|4582|mucin 1, cell surface associated##FJ226041|MUC1|4582|mucin 1, cell surface associated##FJ226042|MUC1|4582|mucin 1, cell surface associated##FJ226043|MUC1|4582|mucin 1, cell surface associated##FJ226044|MUC1|4582|mucin 1, cell surface associated##FJ226045|MUC1|4582|mucin 1, cell surface associated##FJ226046|MUC1|4582|mucin 1, cell surface associated##FJ226047|MUC1|4582|mucin 1, cell surface associated##FJ226049|MUC1|4582|mucin 1, cell surface associated##FJ226050|MUC1|4582|mucin 1, cell surface associated##FJ226051|MUC1|4582|mucin 1, cell surface associated##FJ226052|MUC1|4582|mucin 1, cell surface associated##FJ226053|MUC1|4582|mucin 1, cell surface associated##FJ226054|MUC1|4582|mucin 1, cell surface associated##FJ226055|MUC1|4582|mucin 1, cell surface associated##M32738|MUC1|4582|mucin 1, cell surface associated##M32739|MUC1|4582|mucin 1, cell surface associated##AK301575|MUC1|4582|mucin 1, cell surface associated##M31823|MUC1|4582|mucin 1, cell surface associated##J05581|MUC1|4582|mucin 1, cell surface associated##NM_001018016|MUC1|4582|mucin 1, cell surface associated##NM_001018017|MUC1|4582|mucin 1, cell surface associated##NM_001044390|MUC1|4582|mucin 1, cell surface associated##NM_001044391|MUC1|4582|mucin 1, cell surface associated##NM_001044392|MUC1|4582|mucin 1, cell surface associated##NM_001044393|MUC1|4582|mucin 1, cell surface associated##NM_001204285|MUC1|4582|mucin 1, cell surface associated##NM_001204286|MUC1|4582|mucin 1, cell surface associated##NM_001204287|MUC1|4582|mucin 1, cell surface associated##NM_001204288|MUC1|4582|mucin 1, cell surface associated##NM_001204289|MUC1|4582|mucin 1, cell surface associated##NM_001204290|MUC1|4582|mucin 1, cell surface associated##NM_001204291|MUC1|4582|mucin 1, cell surface associated##NM_001204292|MUC1|4582|mucin 1, cell surface associated##NM_001204293|MUC1|4582|mucin 1, cell surface associated##NM_001204294|MUC1|4582|mucin 1, cell surface associated##NM_001204295|MUC1|4582|mucin 1, cell surface associated##NM_001204296|MUC1|4582|mucin 1, cell surface associated##NM_001204297|MUC1|4582|mucin 1, cell surface associated##NM_002456|MUC1|4582|mucin 1, cell surface associated##J05582|MUC1|4582|mucin 1, cell surface associated##Z17324|MUC1|4582|mucin 1, cell surface associated##Z17325|MUC1|4582|mucin 1, cell surface associated##AK308075|TRIM46|80128|tripartite motif containing 46##NM_002455|MTX1|4580|metaxin 1##NM_198883|MTX1|4580|metaxin 1##AK313863|MTX1|4580|metaxin 1##BC001906|MTX1|4580|metaxin 1##AK311031|THBS3|7059|thrombospondin 3##BC035616|MTX1|4580|metaxin 1##AX775989|MTX1|4580|metaxin 1	0.0	
chr12	133286970	133287119	reg1032585.p1	3.787	+	TSC_hg19_v1_chr12_+_133264236 AF250136 NM_018663 BC073997 AY044439	-22840	+	TSC_hg19_v1_chr12_-_133264011 AF128542	-23023	-	TSC_hg19_v1_chr12_-_133263981 U49356 S60080 BC144561 L09561 NM_006231	-23104	-	TSC_hg19_v1_chr12_+_133287427 NM_001170543 NM_001170544 NM_138575 EU249757 BC008196	392	+	AK025933 TSC_hg19_v1_chr12_-_133306584	19514	-	TSC_hg19_v1_chr12_-_133338419 BC043157 NM_015114	51376	-	AF250136|PXMP2|5827|peroxisomal membrane protein 2, 22kDa##NM_018663|PXMP2|5827|peroxisomal membrane protein 2, 22kDa##BC073997|PXMP2|5827|peroxisomal membrane protein 2, 22kDa##AY044439|PXMP2|5827|peroxisomal membrane protein 2, 22kDa##AF128542|POLE|5426|polymerase (DNA directed), epsilon##U49356|POLE|5426|polymerase (DNA directed), epsilon##S60080|POLE|5426|polymerase (DNA directed), epsilon##BC144561|POLE|5426|polymerase (DNA directed), epsilon##L09561|POLE|5426|polymerase (DNA directed), epsilon##NM_006231|POLE|5426|polymerase (DNA directed), epsilon##NM_001170543|PGAM5|192111|phosphoglycerate mutase family member 5##NM_001170544|PGAM5|192111|phosphoglycerate mutase family member 5##NM_138575|PGAM5|192111|phosphoglycerate mutase family member 5##EU249757|PGAM5|192111|phosphoglycerate mutase family member 5##BC008196|PGAM5|192111|phosphoglycerate mutase family member 5##AK025933|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##BC043157|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##NM_015114|ANKLE2|23141|ankyrin repeat and LEM domain containing 2	0.0	
chr13	19218067	19218170	reg1035746.p1	3.787	+	None	None	None	None	None	None	None	None	None	BC011721 NM_006001	537844	-	BC128146 BC128147 AJ421032 AY219890 NM_001141968 NM_130785 NM_199254	892775	-	TSC_hg19_v1_chr13_+_20207808 AK300258 NM_017520 BC017322 AK092556 AX747597 AL832864 BC003542	989717	+	BC011721|TUBA3C|7278|tubulin, alpha 3c##NM_006001|TUBA3C|7278|tubulin, alpha 3c##BC128146|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##BC128147|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AJ421032|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AY219890|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_001141968|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_130785|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##NM_199254|TPTE2|93492|transmembrane phosphoinositide 3-phosphatase and tensin homolog 2##AK300258|MPHOSPH8|54737|M-phase phosphoprotein 8##NM_017520|MPHOSPH8|54737|M-phase phosphoprotein 8##BC017322|MPHOSPH8|54737|M-phase phosphoprotein 8##AK092556|MPHOSPH8|54737|M-phase phosphoprotein 8##AL832864|MPHOSPH8|54737|M-phase phosphoprotein 8##BC003542|MPHOSPH8|54737|M-phase phosphoprotein 8	0.947196	CTCF.p2:-15:0.947
chr14	79303301	79303434	reg1036297.p1	3.787	+	AB018286 BC152457 NM_004796	-433275	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-1036917	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-1075858	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	442337	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	1374537	-	AK292210 NM_000793	1394029	-	AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	0.96406	CTCF.p2:9:0.964
chr16	50300424	50300498	reg1033370.p2	3.787	+	TSC_hg19_v1_chr16_+_50186838 AK300918 NM_001040284 NM_001040285	-113626	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	-200501	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	-200568	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	15	+	TSC_hg19_v1_chr16_+_50308041 BC039891	7592	+	NM_001114 D25538	21362	+	AK300918|PAPD5|64282|PAP associated domain containing 5##NM_001040284|PAPD5|64282|PAP associated domain containing 5##NM_001040285|PAPD5|64282|PAP associated domain containing 5##AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK093706|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7	0.0	
chr17	73630036	73630145	reg1028624.p1	3.787	+	BC027861 NM_001162995	-577	+	TSC_hg19_v1_chr17_+_73598147 BC033247	-31879	+	AK074680 TSC_hg19_v1_chr17_+_73585572	-44528	+	BC062771 NM_001162997 AK131023	12591	+	BC063440 EF560729 TSC_hg19_v1_chr17_-_73663235 BC016911 AK075084 AK304168 AB042823 AB042824 AB042825 NM_001003715 NM_001003716 NM_004259	33158	-	NM_013260 TSC_hg19_v1_chr17_+_73663441 AK095265 AK298060 BC030233 AY082382 BC007592 AF119664 BC063793 AK002202 AK310177 BC011724 AB464187 AF087869 CU675719 EU446793 BC013409 AK023157	33343	+	BC027861|C17orf109|643008|chromosome 17 open reading frame 109##NM_001162995|C17orf109|643008|chromosome 17 open reading frame 109##BC033247|MYO15B|80022|myosin XVB pseudogene##AK074680|MYO15B|80022|myosin XVB pseudogene##BC062771|C17orf110|100130933|chromosome 17 open reading frame 110##NM_001162997|C17orf110|100130933|chromosome 17 open reading frame 110##AK131023|C17orf110|100130933|chromosome 17 open reading frame 110##BC063440|RECQL5|9400|RecQ protein-like 5##EF560729|RECQL5|9400|RecQ protein-like 5##BC016911|RECQL5|9400|RecQ protein-like 5##AK075084|RECQL5|9400|RecQ protein-like 5##AK304168|RECQL5|9400|RecQ protein-like 5##AB042823|RECQL5|9400|RecQ protein-like 5##AB042824|RECQL5|9400|RecQ protein-like 5##AB042825|RECQL5|9400|RecQ protein-like 5##NM_001003715|RECQL5|9400|RecQ protein-like 5##NM_001003716|RECQL5|9400|RecQ protein-like 5##NM_004259|RECQL5|9400|RecQ protein-like 5##NM_013260|SAP30BP|29115|SAP30 binding protein##AK095265|SAP30BP|29115|SAP30 binding protein##AK298060|SAP30BP|29115|SAP30 binding protein##BC030233|SAP30BP|29115|SAP30 binding protein##AY082382|SAP30BP|29115|SAP30 binding protein##BC007592|SAP30BP|29115|SAP30 binding protein##AF119664|SAP30BP|29115|SAP30 binding protein##BC063793|SAP30BP|29115|SAP30 binding protein##AK002202|SAP30BP|29115|SAP30 binding protein##AK310177|SAP30BP|29115|SAP30 binding protein##BC011724|SAP30BP|29115|SAP30 binding protein##AF087869|SAP30BP|29115|SAP30 binding protein##EU446793|SAP30BP|29115|SAP30 binding protein##BC013409|SAP30BP|29115|SAP30 binding protein##AK023157|SAP30BP|29115|SAP30 binding protein	0.017525	
chr19	12807403	12807553	reg1034892.p1	3.787	+	AY736034 TSC_hg19_v1_chr19_-_12807434 BC004290 AK302744 AK123037 NM_032301	-54	-	TSC_hg19_v1_chr19_-_12792699 AK300498 NM_001930 NM_013406	-14765	-	TSC_hg19_v1_chr19_-_12792697 AK291553 AK304780	-14792	-	TSC_hg19_v1_chr19_-_12833356 BC063679 BC072420 NM_013433 BC018314 AK299485	25670	-	NM_001136196 TSC_hg19_v1_chr19_-_12833473	26005	-	TSC_hg19_v1_chr19_-_12834747 AF007748 AK056183 NM_001136195	27256	-	AY736034|FBXW9|84261|F-box and WD repeat domain containing 9##BC004290|FBXW9|84261|F-box and WD repeat domain containing 9##AK302744|FBXW9|84261|F-box and WD repeat domain containing 9##AK123037|FBXW9|84261|F-box and WD repeat domain containing 9##NM_032301|FBXW9|84261|F-box and WD repeat domain containing 9##AK300498|DHPS|1725|deoxyhypusine synthase##NM_001930|DHPS|1725|deoxyhypusine synthase##NM_013406|DHPS|1725|deoxyhypusine synthase##AK291553|DHPS|1725|deoxyhypusine synthase##AK304780|DHPS|1725|deoxyhypusine synthase##BC063679|TNPO2|30000|transportin 2##BC072420|TNPO2|30000|transportin 2##NM_013433|TNPO2|30000|transportin 2##BC018314|TNPO2|30000|transportin 2##AK299485|TNPO2|30000|transportin 2##NM_001136196|TNPO2|30000|transportin 2##AF007748|TNPO2|30000|transportin 2##AK056183|TNPO2|30000|transportin 2##NM_001136195|TNPO2|30000|transportin 2	0.0	
chr21	43288504	43288684	reg1031371.p2	3.787	+	AK027424 TSC_hg19_v1_chr21_-_43187270	-101327	-	TSC_hg19_v1_chr21_-_43187213 EU832165 EU832259 BC035755 BC110617 BC110618 AB047783 AJ278016 NM_020639	-101372	-	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	-408511	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	10904	-	BC062323 AL833323 NM_199050	58195	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	85489	-	AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4##NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2	0.051916	
chr5	70896977	70897116	reg1023432.p1	3.787	+	AF261884 TSC_hg19_v1_chr5_+_70883182 BC065027 CU688004	-13831	+	TSC_hg19_v1_chr5_+_70883166 AB050049 AF301000 AK310194	-13895	+	AF310971 TSC_hg19_v1_chr5_+_70883132	-13914	+	TSC_hg19_v1_chr5_+_70944968 AK025591	47941	+	NM_004291 BC029882 U16826 CR542216 CU688778 EU831800 EU831877	118008	+	TSC_hg19_v1_chr5_+_71403301 BC017240 NM_005909 BC025240 BC139918 BC150196 BC046114 AK096273 AK308147 BX647077 BC039822 BC108733 BC032516 BC073993 BC056145 BC063669 BC094834 AB463119	506233	+	AF261884|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##BC065027|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AB050049|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AF301000|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AK310194|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AF310971|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##NM_004291|CARTPT|9607|CART prepropeptide##BC029882|CARTPT|9607|CART prepropeptide##U16826|CARTPT|9607|CART prepropeptide##CR542216|CARTPT|9607|CART prepropeptide##EU831800|CARTPT|9607|CART prepropeptide##EU831877|CARTPT|9607|CART prepropeptide##BC017240|MAP1B|4131|microtubule-associated protein 1B##NM_005909|MAP1B|4131|microtubule-associated protein 1B##BC025240|MAP1B|4131|microtubule-associated protein 1B##BC139918|MAP1B|4131|microtubule-associated protein 1B##BC150196|MAP1B|4131|microtubule-associated protein 1B##BC046114|MAP1B|4131|microtubule-associated protein 1B##AK096273|MAP1B|4131|microtubule-associated protein 1B##AK308147|MAP1B|4131|microtubule-associated protein 1B##BX647077|MAP1B|4131|microtubule-associated protein 1B##BC039822|MAP1B|4131|microtubule-associated protein 1B##BC108733|MAP1B|4131|microtubule-associated protein 1B##BC032516|MAP1B|4131|microtubule-associated protein 1B##BC073993|MAP1B|4131|microtubule-associated protein 1B##BC056145|MAP1B|4131|microtubule-associated protein 1B##BC063669|MAP1B|4131|microtubule-associated protein 1B##BC094834|MAP1B|4131|microtubule-associated protein 1B	0.0	
chr6	137736655	137736789	reg1006553.p1	3.787	+	TSC_hg19_v1_chr6_-_137540556 NM_000416	-196164	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-196177	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	-196210	-	BC051352 AK096362 NM_175747	78803	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	451815	+	TSC_hg19_v1_chr6_-_138189314 AK124173	452628	-	NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3	0.0	
chr6	37138591	37138705	reg1024499.p2	3.787	+	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	-526	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-165147	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-184378	-	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	86738	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	86951	+	TSC_hg19_v1_chr6_-_37225916 BC009625 NM_001162900	87279	-	NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B##BC009625|TMEM217|221468|transmembrane protein 217##NM_001162900|TMEM217|221468|transmembrane protein 217	0.011814	
chr11	65559282	65559379	reg1034907.p1	3.786	+	TSC_hg19_v1_chr11_+_65554569 AK291711 BX648725	-4735	+	NM_004561 BC059408 TSC_hg19_v1_chr11_+_65554533	-4807	+	NM_138368	-11509	-	TSC_hg19_v1_chr11_+_65601409 NM_152760 AK293827 AL833261 AK309789 AK296055 AK299512 BC040981 AK309435 AK289587 AK055496 AK311588 BC045563 CU691940 CU692270	42136	+	X95404 BC011005 BC018256 BC012318 BC012265 TSC_hg19_v1_chr11_-_65625648 AK303614	66304	-	D28345 TSC_hg19_v1_chr11_-_65625651	66320	-	AK291711|OVOL1|5017|ovo-like 1(Drosophila)##BX648725|OVOL1|5017|ovo-like 1(Drosophila)##NM_004561|OVOL1|5017|ovo-like 1(Drosophila)##BC059408|OVOL1|5017|ovo-like 1(Drosophila)##NM_138368|DKFZp761E198|91056|adaptor protein 5##NM_152760|SNX32|254122|sorting nexin 32##AK293827|SNX32|254122|sorting nexin 32##AL833261|SNX32|254122|sorting nexin 32##AK309789|SNX32|254122|sorting nexin 32##AK296055|SNX32|254122|sorting nexin 32##AK299512|SNX32|254122|sorting nexin 32##BC040981|SNX32|254122|sorting nexin 32##AK309435|SNX32|254122|sorting nexin 32##AK289587|SNX32|254122|sorting nexin 32##AK055496|SNX32|254122|sorting nexin 32##BC045563|SNX32|254122|sorting nexin 32##X95404|CFL1|1072|cofilin 1 (non-muscle)##BC011005|CFL1|1072|cofilin 1 (non-muscle)##BC018256|CFL1|1072|cofilin 1 (non-muscle)##BC012318|CFL1|1072|cofilin 1 (non-muscle)##BC012265|CFL1|1072|cofilin 1 (non-muscle)	0.0	
chr1	199015698	199015788	reg1033869.p1	3.786	+	TSC_hg19_v1_chr1_-_198906559 EF413001	-109196	-	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-407413	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-407518	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	981126	+	AK316513 TSC_hg19_v1_chr1_+_200011716	995981	+	NM_001105517	1166912	+	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene	0.0	
chr1	25345912	25346054	reg1036458.p1	3.786	+	BC013362 AK310945 NM_001031680 AF022726	-54441	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-89197	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-89244	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	213004	-	BC065040 TSC_hg19_v1_chr1_-_25573922	227940	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	227990	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr14	96565360	96565541	reg1003470.p2	3.786	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	-59804	+	AK023027 TSC_hg19_v1_chr14_+_96342762	-222705	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-384983	-	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	105627	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	105746	+	AK291970 AK309528 NM_000710 TSC_hg19_v1_chr14_+_96722546 U30271 AJ238044	157104	+	NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##AK023027|LOC100507043|100507043|uncharacterized LOC100507043##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2##AK291970|BDKRB1|623|bradykinin receptor B1##AK309528|BDKRB1|623|bradykinin receptor B1##NM_000710|BDKRB1|623|bradykinin receptor B1##U30271|BDKRB1|623|bradykinin receptor B1##AJ238044|BDKRB1|623|bradykinin receptor B1	0.0	
chr16	87495139	87495242	reg1038976.p2	3.786	+	TSC_hg19_v1_chr16_+_87425998 AF303888 AM393561 DQ893152 DQ896448 AB528176 AL834298	-69176	+	TSC_hg19_v1_chr16_+_87425947 AK025556 BC067797 BC018634	-69227	+	TSC_hg19_v1_chr16_+_87425938 AK290956 BC048009 AK310224 AK310335 AF087871 AF183417	-69281	+	AB011151 AB384500 NM_015144 AB030243 BC101478	30200	-	AB593088 TSC_hg19_v1_chr16_+_87636492 NM_020655 BC036533	141311	+	TSC_hg19_v1_chr16_+_87636574 AB042636	141388	+	AF303888|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AM393561|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ893152|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##DQ896448|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AL834298|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK025556|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC067797|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC018634|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK290956|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##BC048009|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK310224|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AK310335|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AF087871|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AF183417|MAP1LC3B|81631|microtubule-associated protein 1 light chain 3 beta##AB011151|ZCCHC14|23174|zinc finger, CCHC domain containing 14##NM_015144|ZCCHC14|23174|zinc finger, CCHC domain containing 14##AB030243|ZCCHC14|23174|zinc finger, CCHC domain containing 14##BC101478|ZCCHC14|23174|zinc finger, CCHC domain containing 14##NM_020655|JPH3|57338|junctophilin 3##BC036533|JPH3|57338|junctophilin 3##AB042636|JPH3|57338|junctophilin 3	0.523323	CTCF.p2:-5:0.523
chr18	36067730	36067812	reg1035277.p2	3.786	+	NM_001025087 NM_001025088 NM_001025089 NM_020180	-921772	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	-922075	-	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-1658651	-	TSC_hg19_v1_chr18_-_36915657 D28405	847885	-	TSC_hg19_v1_chr18_-_37380279 AK090603	1312497	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	3467428	+	NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK090603|LOC647946|647946|uncharacterized LOC647946##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3	0.0	
chr19	7766575	7766677	reg1027136.p1	3.786	+	TSC_hg19_v1_chr19_-_7764328 NM_001207019	-2300	-	TSC_hg19_v1_chr19_+_7745742 BC042161 NM_174894 NM_001042461 BC022836	-20871	+	NM_001042462 TSC_hg19_v1_chr19_+_7745726 AK292001	-20909	+	BC064417 BC062591 AK223207 BC014108 M14766 TSC_hg19_v1_chr19_-_7767004 AK310707 AK310071 M15059 NM_001220500 NM_002002 X04772	378	-	AY203939 BC093691 BC093693 BC143309 AY423706 NM_001244856 NM_198492	30390	-	AY042221 AY042222 AY042223 AY042224 AY042225 AY042226 AY042227 AY042228 AY042229 AY042230 AY042231 AY042232 AY042233 AB527563 BC110615 AF290886 AK293089 TSC_hg19_v1_chr19_-_7812421 M98457 AK304190 AK313585 NM_001144893 NM_001144894 NM_001144895 NM_001144896 NM_001144897 NM_001144899 NM_021155	45803	-	NM_001207019|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC042161|TRAPPC5|126003|trafficking protein particle complex 5##NM_174894|TRAPPC5|126003|trafficking protein particle complex 5##NM_001042461|TRAPPC5|126003|trafficking protein particle complex 5##BC022836|TRAPPC5|126003|trafficking protein particle complex 5##NM_001042462|TRAPPC5|126003|trafficking protein particle complex 5##AK292001|TRAPPC5|126003|trafficking protein particle complex 5##BC064417|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC062591|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK223207|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC014108|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M14766|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310707|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310071|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M15059|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_001220500|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_002002|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##X04772|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AY203939|CLEC4G|339390|C-type lectin domain family 4, member G##BC093691|CLEC4G|339390|C-type lectin domain family 4, member G##BC093693|CLEC4G|339390|C-type lectin domain family 4, member G##BC143309|CLEC4G|339390|C-type lectin domain family 4, member G##AY423706|CLEC4G|339390|C-type lectin domain family 4, member G##NM_001244856|CLEC4G|339390|C-type lectin domain family 4, member G##NM_198492|CLEC4G|339390|C-type lectin domain family 4, member G##AY042221|CD209|30835|CD209 molecule##AY042222|CD209|30835|CD209 molecule##AY042223|CD209|30835|CD209 molecule##AY042224|CD209|30835|CD209 molecule##AY042225|CD209|30835|CD209 molecule##AY042226|CD209|30835|CD209 molecule##AY042227|CD209|30835|CD209 molecule##AY042228|CD209|30835|CD209 molecule##AY042229|CD209|30835|CD209 molecule##AY042230|CD209|30835|CD209 molecule##AY042231|CD209|30835|CD209 molecule##AY042232|CD209|30835|CD209 molecule##AY042233|CD209|30835|CD209 molecule##BC110615|CD209|30835|CD209 molecule##AF290886|CD209|30835|CD209 molecule##AK293089|CD209|30835|CD209 molecule##M98457|CD209|30835|CD209 molecule##AK304190|CD209|30835|CD209 molecule##AK313585|CD209|30835|CD209 molecule##NM_001144893|CD209|30835|CD209 molecule##NM_001144894|CD209|30835|CD209 molecule##NM_001144895|CD209|30835|CD209 molecule##NM_001144896|CD209|30835|CD209 molecule##NM_001144897|CD209|30835|CD209 molecule##NM_001144899|CD209|30835|CD209 molecule##NM_021155|CD209|30835|CD209 molecule	0.0	
chr2	9922718	9922827	reg1038682.p1	3.786	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-151647	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	-151723	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	-152159	-	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	60848	+	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	169078	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	261020	+	NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11	0.135496	
chr3	131929729	131929837	reg1036272.p1	3.786	+	AK056175 TSC_hg19_v1_chr3_-_131753859 BC014396 NM_130808	-175943	-	TSC_hg19_v1_chr3_-_131221816 CR456720 CU678442 BC002345 X06323 BC003375 AK301377 AK296626 NM_007208	-708029	-	NM_001171905 TSC_hg19_v1_chr3_+_131100637 NM_001171906 NM_152395 BC031215 AK295852 AK304650 BC009546 AK055827	-829132	+	NM_001099 NM_001134194 AK300540 BC007460 BC016344 TSC_hg19_v1_chr3_+_132036250 BC008493 BC017877 X53605	106455	+	TSC_hg19_v1_chr3_+_132036278 M24902 X52174 M34840 CU677613 CU678987 DQ893148 DQ896443 AB102888	106505	+	AB014578 BC151246 TSC_hg19_v1_chr3_+_132136540 AY779857 BC043583 NM_015268	206744	+	AK056175|CPNE4|131034|copine IV##BC014396|CPNE4|131034|copine IV##NM_130808|CPNE4|131034|copine IV##CR456720|MRPL3|11222|mitochondrial ribosomal protein L3##X06323|MRPL3|11222|mitochondrial ribosomal protein L3##BC003375|MRPL3|11222|mitochondrial ribosomal protein L3##AK301377|MRPL3|11222|mitochondrial ribosomal protein L3##AK296626|MRPL3|11222|mitochondrial ribosomal protein L3##NM_007208|MRPL3|11222|mitochondrial ribosomal protein L3##NM_001171905|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001171906|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_152395|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC031215|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK295852|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK304650|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##BC009546|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##AK055827|NUDT16|131870|nudix (nucleoside diphosphate linked moiety X)-type motif 16##NM_001099|ACPP|55|acid phosphatase, prostate##NM_001134194|ACPP|55|acid phosphatase, prostate##AK300540|ACPP|55|acid phosphatase, prostate##BC007460|ACPP|55|acid phosphatase, prostate##BC016344|ACPP|55|acid phosphatase, prostate##BC008493|ACPP|55|acid phosphatase, prostate##BC017877|ACPP|55|acid phosphatase, prostate##X53605|ACPP|55|acid phosphatase, prostate##M24902|ACPP|55|acid phosphatase, prostate##X52174|ACPP|55|acid phosphatase, prostate##M34840|ACPP|55|acid phosphatase, prostate##DQ893148|ACPP|55|acid phosphatase, prostate##DQ896443|ACPP|55|acid phosphatase, prostate##AB102888|ACPP|55|acid phosphatase, prostate##AB014578|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC151246|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##AY779857|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##BC043583|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13##NM_015268|DNAJC13|23317|DnaJ (Hsp40) homolog, subfamily C, member 13	0.52036	CTCF.p2:1:0.520
chr3	49377770	49377950	reg1011091.p2	3.786	+	TSC_hg19_v1_chr3_-_49377520 NM_001251877 NM_003363 NM_199443	-332	-	TSC_hg19_v1_chr3_-_49377487 BC125131 BC125130	-361	-	TSC_hg19_v1_chr3_-_49377482 AK291795	-380	-	TSC_hg19_v1_chr3_-_49395733 X13709 X13710 AK225835 BC007865 BC070258 BC000742	17855	-	M21304 TSC_hg19_v1_chr3_-_49395760 AK130160 D28370 NM_000581 NM_201397	17910	-	TSC_hg19_v1_chr3_-_49399989 BC000946	22154	-	NM_001251877|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##NM_003363|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##NM_199443|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##BC125131|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##BC125130|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##AK291795|USP4|7375|ubiquitin specific peptidase 4 (proto-oncogene)##X13709|GPX1|2876|glutathione peroxidase 1##X13710|GPX1|2876|glutathione peroxidase 1##AK225835|GPX1|2876|glutathione peroxidase 1##BC007865|GPX1|2876|glutathione peroxidase 1##BC070258|GPX1|2876|glutathione peroxidase 1##BC000742|GPX1|2876|glutathione peroxidase 1##M21304|GPX1|2876|glutathione peroxidase 1##AK130160|GPX1|2876|glutathione peroxidase 1##NM_000581|GPX1|2876|glutathione peroxidase 1##NM_201397|GPX1|2876|glutathione peroxidase 1##BC000946|RHOA|387|ras homolog gene family, member A	0.0	
chr4	185209799	185209870	reg1034502.p1	3.786	+	BC035035 AY358676 AK057370 NM_153343	-70769	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-381923	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-382014	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	185847	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	360767	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	360999	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr5	148110860	148110979	reg1000474.p2	3.786	+	AK308471 TSC_hg19_v1_chr5_-_148034091	-76829	-	AJ131724 TSC_hg19_v1_chr5_-_148033739 NM_000870	-77192	-	AJ633645 AM712912 Y10437 Y13584 AJ011371 BC095497 Y09586 AJ131725 AJ131726 AJ278979 AJ278980 AJ278981 AJ278982 Y08756 Y12505 Y12506 Y12507 AJ519673 BC074755 NM_001040169 NM_001040172 NM_001040173 NM_199453	-94320	-	NM_000024 TSC_hg19_v1_chr5_+_148206185 AK313151 BC012481 AK223025 BC073856 BC063486 X04827	95267	+	AB075865 AL832651 AK300420 TSC_hg19_v1_chr5_-_148442626 BC113879 BC114486 AY341075 AB070620 NM_024577	331752	-	TSC_hg19_v1_chr5_+_148521067 NM_014945 AB020650 AK225769 BC014463 BC001665	410271	+	AK308471|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131724|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000870|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ633645|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AM712912|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y10437|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y13584|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ011371|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC095497|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y09586|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131725|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ131726|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278979|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278980|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278981|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ278982|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y08756|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12505|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12506|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##Y12507|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##AJ519673|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##BC074755|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040169|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040172|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_001040173|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_199453|HTR4|3360|5-hydroxytryptamine (serotonin) receptor 4##NM_000024|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK313151|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC012481|ADRB2|154|adrenergic, beta-2-, receptor, surface##AK223025|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC073856|ADRB2|154|adrenergic, beta-2-, receptor, surface##BC063486|ADRB2|154|adrenergic, beta-2-, receptor, surface##X04827|ADRB2|154|adrenergic, beta-2-, receptor, surface##AB075865|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AL832651|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AK300420|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC113879|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##BC114486|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##AY341075|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_024577|SH3TC2|79628|SH3 domain and tetratricopeptide repeats 2##NM_014945|ABLIM3|22885|actin binding LIM protein family, member 3##AB020650|ABLIM3|22885|actin binding LIM protein family, member 3##AK225769|ABLIM3|22885|actin binding LIM protein family, member 3##BC014463|ABLIM3|22885|actin binding LIM protein family, member 3##BC001665|ABLIM3|22885|actin binding LIM protein family, member 3	0.0	
chr7	136559315	136559430	reg1036944.p1	3.786	+	AK125233 AY034604 AY456125 AY456126 AY456127 NM_000739 NM_001006631 NM_001006632 AY219705 NM_001006626 AY219703 NM_001006629 AY034605 NM_001006628 TSC_hg19_v1_chr7_+_136554002	-5455	+	AY034603 AY219704 NM_001006627 NM_001006630 AK290236 AL832585	-5966	+	BC013989 TSC_hg19_v1_chr7_-_135662202 NM_001128619 NM_145808	-897170	-	TSC_hg19_v1_chr7_-_137028305 D90226	468931	-	TSC_hg19_v1_chr7_-_137028371 AK290488	469001	-	X52946 TSC_hg19_v1_chr7_-_137028443 AK313424	469069	-	AK125233|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034604|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456125|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456126|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456127|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_000739|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006631|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006632|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219705|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006626|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219703|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006629|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034605|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006628|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034603|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219704|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006627|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006630|CHRM2|1129|cholinergic receptor, muscarinic 2##AK290236|CHRM2|1129|cholinergic receptor, muscarinic 2##AL832585|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001128619|LUZP6|767558|leucine zipper protein 6##NM_145808|MTPN|136319|myotrophin##D90226|PTN|5764|pleiotrophin##AK290488|PTN|5764|pleiotrophin##X52946|PTN|5764|pleiotrophin##AK313424|PTN|5764|pleiotrophin	0.981889	CTCF.p2:0:0.982
chr1	160053869	160053956	reg1003035.p1	3.785	+	TSC_hg19_v1_chr1_+_160051343 NM_004983 U52152 BC117516 BC117517 BC117518 BC117519	-2550	+	BC131627 BC034036 AK312383 TSC_hg19_v1_chr1_-_160040009 U52155 NM_002241	-13914	-	AB028127 TSC_hg19_v1_chr1_-_160001781 BC019865 AK074655 BC011395 NM_145167	-52158	-	AB590475 TSC_hg19_v1_chr1_-_160068277 AY157579 AF311906 AY044845	14385	-	TSC_hg19_v1_chr1_-_160068411 AF407274 AK055843 BC053881 NM_052868	14503	-	AK308115 NM_001206665 TSC_hg19_v1_chr1_-_160068754	14776	-	NM_004983|KCNJ9|3765|potassium inwardly-rectifying channel, subfamily J, member 9##U52152|KCNJ9|3765|potassium inwardly-rectifying channel, subfamily J, member 9##BC131627|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##BC034036|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##AK312383|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##U52155|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##NM_002241|KCNJ10|3766|potassium inwardly-rectifying channel, subfamily J, member 10##AB028127|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC019865|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AK074655|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC011395|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##NM_145167|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AY157579|IGSF8|93185|immunoglobulin superfamily, member 8##AF311906|IGSF8|93185|immunoglobulin superfamily, member 8##AY044845|IGSF8|93185|immunoglobulin superfamily, member 8##AF407274|IGSF8|93185|immunoglobulin superfamily, member 8##AK055843|IGSF8|93185|immunoglobulin superfamily, member 8##BC053881|IGSF8|93185|immunoglobulin superfamily, member 8##NM_052868|IGSF8|93185|immunoglobulin superfamily, member 8##AK308115|IGSF8|93185|immunoglobulin superfamily, member 8##NM_001206665|IGSF8|93185|immunoglobulin superfamily, member 8	0.0	
chr12	120868246	120868356	reg1002563.p1	3.785	+	AB463899 AB012851 NM_002442 TSC_hg19_v1_chr12_-_120806968	-61365	-	AB464016 EU832774 GQ129318 AK311830 BC005386 BC013384 BC106725 BC106726 M21054 NM_000928	-102728	-	NM_012240 TSC_hg19_v1_chr12_+_120740123 BC034736 AF083109 BC109319 BC109320	-128159	+	TSC_hg19_v1_chr12_+_120875920 AK312009 NM_004373 BC107861 BC070186 BC007723 DQ893099 DQ896371	7609	+	U75688 DQ893091 DQ896363 AF161481 AK312006 BC055313 BC002638 NM_016399	15888	-	TSC_hg19_v1_chr12_+_120884261 NM_176818 AK094319	15919	+	AB012851|MSI1|4440|musashi homolog 1 (Drosophila)##NM_002442|MSI1|4440|musashi homolog 1 (Drosophila)##EU832774|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##GQ129318|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##AK311830|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC005386|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC013384|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106725|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##BC106726|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##M21054|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##NM_000928|PLA2G1B|5319|phospholipase A2, group IB (pancreas)##NM_012240|SIRT4|23409|sirtuin 4##BC034736|SIRT4|23409|sirtuin 4##AF083109|SIRT4|23409|sirtuin 4##BC109319|SIRT4|23409|sirtuin 4##BC109320|SIRT4|23409|sirtuin 4##AK312009|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##NM_004373|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC107861|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC070186|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##BC007723|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ893099|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##DQ896371|COX6A1|1337|cytochrome c oxidase subunit VIa polypeptide 1##U75688|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ893091|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ896363|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AF161481|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AK312006|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC055313|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC002638|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##NM_016399|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##NM_176818|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##AK094319|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)	0.0	
chr1	46814050	46814168	reg1000461.p2	3.785	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-7666	+	TSC_hg19_v1_chr1_+_46769369 D28439 BC093060 BC001934 NM_006004 BC015177 BC107703 BC001426 AK311967 Y00764 M36647 BT007070	-44722	+	TSC_hg19_v1_chr1_-_46769053 NM_006369 AK297596	-45061	-	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	45867	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	158563	+	NM_001097611	202777	-	NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##D28439|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC093060|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001934|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006004|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC015177|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC107703|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001426|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##AK311967|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##Y00764|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##M36647|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BT007070|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006369|LRRC41|10489|leucine rich repeat containing 41##AK297596|LRRC41|10489|leucine rich repeat containing 41##NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001097611|KNCN|148930|kinocilin	0.0	
chr19	12163667	12163801	reg1044560.p2	3.785	+	TSC_hg19_v1_chr19_-_12146530 AK098300 NM_001080411	-17193	-	TSC_hg19_v1_chr19_-_12146492 AK129553 BC047412	-17245	-	AK092240 AK299224 AX747424 NM_001012753 BC105711 BC105712 BC105713	-87852	+	NM_001080404	47	-	AK299732 AL832297 AK098117 NM_001136501 BC125185 BC125186 TSC_hg19_v1_chr19_+_12175767	11906	+	AK128700 TSC_hg19_v1_chr19_+_12203111 AK124155	39379	+	AK098300|ZNF433|163059|zinc finger protein 433##NM_001080411|ZNF433|163059|zinc finger protein 433##BC047412|ZNF433|163059|zinc finger protein 433##AK092240|ZNF763|284390|zinc finger protein 763##AK299224|ZNF763|284390|zinc finger protein 763##NM_001012753|ZNF763|284390|zinc finger protein 763##BC105711|ZNF763|284390|zinc finger protein 763##BC105712|ZNF763|284390|zinc finger protein 763##BC105713|ZNF763|284390|zinc finger protein 763##NM_001080404|ZNF878|729747|zinc finger protein 878##AK299732|ZNF844|284391|zinc finger protein 844##AL832297|ZNF844|284391|zinc finger protein 844##AK098117|ZNF844|284391|zinc finger protein 844##NM_001136501|ZNF844|284391|zinc finger protein 844##BC125185|ZNF844|284391|zinc finger protein 844##BC125186|ZNF844|284391|zinc finger protein 844##AK128700|ZNF788|388507|zinc finger family member 788	0.0	
chr19	6717169	6717296	reg1033498.p1	3.785	+	AF064090 NM_003807 NM_172014	-46634	-	TSC_hg19_v1_chr19_-_6670094 CR541854 CR541871 AB528780 AF036581 AY028261 AY358812 BC018058 AK292037	-47108	-	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	-126074	-	TSC_hg19_v1_chr19_-_6720662 BC063852 BC150179 BC150200 K02765 AK304071 BC150299 NM_000064 AK299114	3424	-	AL365404 TSC_hg19_v1_chr19_-_6737583	20343	-	TSC_hg19_v1_chr19_-_6737592 AK291968	20363	-	AF064090|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_003807|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_172014|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541854|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541871|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF036581|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY028261|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY358812|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC018058|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AK292037|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule##BC063852|C3|718|complement component 3##BC150179|C3|718|complement component 3##BC150200|C3|718|complement component 3##K02765|C3|718|complement component 3##AK304071|C3|718|complement component 3##BC150299|C3|718|complement component 3##NM_000064|C3|718|complement component 3##AL365404|GPR108|56927|G protein-coupled receptor 108##AK291968|GPR108|56927|G protein-coupled receptor 108	0.0	
chr20	5778848	5778928	reg1034085.p2	3.785	+	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	-47822	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	-187301	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-483852	-	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	113238	+	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	152235	-	AJ439063 NM_032485 NM_182802 AK297806 BC101054 BC101055 BC101056 BC101057 BC080656 AY158211 BC005170 AK314654	152595	+	AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AJ439063|MCM8|84515|minichromosome maintenance complex component 8##NM_032485|MCM8|84515|minichromosome maintenance complex component 8##NM_182802|MCM8|84515|minichromosome maintenance complex component 8##AK297806|MCM8|84515|minichromosome maintenance complex component 8##BC101054|MCM8|84515|minichromosome maintenance complex component 8##BC101055|MCM8|84515|minichromosome maintenance complex component 8##BC101056|MCM8|84515|minichromosome maintenance complex component 8##BC101057|MCM8|84515|minichromosome maintenance complex component 8##BC080656|MCM8|84515|minichromosome maintenance complex component 8##AY158211|MCM8|84515|minichromosome maintenance complex component 8##BC005170|MCM8|84515|minichromosome maintenance complex component 8##AK314654|MCM8|84515|minichromosome maintenance complex component 8	0.0	
chr21	44733843	44733978	reg1032414.p1	3.785	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-144736	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-206226	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-206285	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	112079	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	113085	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	345452	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr2	197242066	197242191	reg1034673.p1	3.785	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-205810	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-205849	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-308633	-	BC117194 BC117198 AB037722 NM_020760	215164	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	262229	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	422285	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.0	
chr7	137505570	137505661	reg1036909.p1	3.785	+	BC005916 TSC_hg19_v1_chr7_-_137028543 NM_002825 M57399	-477060	-	X52946 TSC_hg19_v1_chr7_-_137028443 AK313424	-477174	-	TSC_hg19_v1_chr7_-_137028371 AK290488	-477242	-	TSC_hg19_v1_chr7_-_137531587 NM_004717	25981	-	TSC_hg19_v1_chr7_+_137531690 BC047556	26117	+	TSC_hg19_v1_chr7_-_137620668 BC015585	115047	-	BC005916|PTN|5764|pleiotrophin##NM_002825|PTN|5764|pleiotrophin##M57399|PTN|5764|pleiotrophin##X52946|PTN|5764|pleiotrophin##AK313424|PTN|5764|pleiotrophin##AK290488|PTN|5764|pleiotrophin##NM_004717|DGKI|9162|diacylglycerol kinase, iota##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.053607	
chr9	134138147	134138285	reg1035097.p1	3.785	+	TSC_hg19_v1_chr9_+_134001016 D14689 AB159230	-137166	+	TSC_hg19_v1_chr9_+_134000975 BC105998 AK307573 NM_005085 AL832609 X64228 BC045620 BC012500	-137242	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	-166258	+	BC049388 NM_033387 AK095423	13703	-	TSC_hg19_v1_chr9_+_134165108 AK075207 NM_032728 BC006362 AK027568 AK315502 AB385550	27012	+	TSC_hg19_v1_chr9_+_134269515 BC002872	131350	+	D14689|NUP214|8021|nucleoporin 214kDa##AB159230|NUP214|8021|nucleoporin 214kDa##BC105998|NUP214|8021|nucleoporin 214kDa##AK307573|NUP214|8021|nucleoporin 214kDa##NM_005085|NUP214|8021|nucleoporin 214kDa##AL832609|NUP214|8021|nucleoporin 214kDa##X64228|NUP214|8021|nucleoporin 214kDa##BC045620|NUP214|8021|nucleoporin 214kDa##BC012500|NUP214|8021|nucleoporin 214kDa##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like##BC049388|FAM78A|286336|family with sequence similarity 78, member A##NM_033387|FAM78A|286336|family with sequence similarity 78, member A##AK095423|FAM78A|286336|family with sequence similarity 78, member A##AK075207|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##NM_032728|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC006362|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK027568|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK315502|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC002872|PRRC2B|84726|proline-rich coiled-coil 2B	0.0	
chrX	21372981	21373082	reg1038188.p1	3.785	+	TSC_hg19_v1_chrX_-_20285141 AK294373	-1087867	-	TSC_hg19_v1_chrX_-_20285001 AB208933	-1088074	-	AB102662 L07599 AB384785 BC096301 BC096302 BC096303 NM_004586 U08316 AK313932	-1088301	-	TSC_hg19_v1_chrX_+_21392535 NM_001168647 NM_001168648 NM_001168649 NM_014927 AB020709 AK294728	19477	+	BC109031 AK092279 AX747450 NM_153270	303400	-	BC005948 AF129505 AJ250584 NM_014332 AK312134	403186	-	AK294373|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AB208933|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AB102662|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##L07599|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096301|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096302|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##BC096303|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##NM_004586|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##U08316|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##AK313932|RPS6KA3|6197|ribosomal protein S6 kinase, 90kDa, polypeptide 3##NM_001168647|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168648|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168649|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_014927|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AB020709|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AK294728|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##BC109031|KLHL34|257240|kelch-like 34 (Drosophila)##AK092279|KLHL34|257240|kelch-like 34 (Drosophila)##NM_153270|KLHL34|257240|kelch-like 34 (Drosophila)##BC005948|SMPX|23676|small muscle protein, X-linked##AF129505|SMPX|23676|small muscle protein, X-linked##AJ250584|SMPX|23676|small muscle protein, X-linked##NM_014332|SMPX|23676|small muscle protein, X-linked##AK312134|SMPX|23676|small muscle protein, X-linked	0.0	
chr12	104319036	104319207	reg1034838.p1	3.784	+	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	-84142	-	AB032773 TSC_hg19_v1_chr12_-_104234857	-84297	-	AY311388 AJ295695 NM_017564 AB052958	-338060	+	TSC_hg19_v1_chr12_+_104324159 AJ890084 AK025459	5037	+	TSC_hg19_v1_chr12_+_104324187 AK298996 AK300521 NM_003299 S74939 X15187	5066	+	TSC_hg19_v1_chr12_+_104324199 BC066656	5078	+	BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AJ890084|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK025459|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK298996|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK300521|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##NM_003299|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##X15187|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##BC066656|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1	0.0	
chr13	40780822	40780911	reg1038048.p1	3.784	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-551005	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-603504	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-603539	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	459846	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	564426	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	564466	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.0	
chr13	85149140	85149230	reg1031017.p2	3.784	+	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-692685	-	TSC_hg19_v1_chr13_-_84456424 BC051738	-692760	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-4234121	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	1224254	-	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	3175684	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	6901719	+	AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5	0.947506	CTCF.p2:4:0.948
chr1	63314846	63314970	reg1034487.p1	3.784	+	TSC_hg19_v1_chr1_+_63249807 NM_032852 NM_178221 AK027773 BC018678 BC033024 BC008395	-65095	+	DQ341187 TSC_hg19_v1_chr1_-_63154045 AK055401 NM_033407 AK292640	-160781	-	NM_014495 AK315304 TSC_hg19_v1_chr1_+_63063190 AK289426 BC007059 BC058287 AY358273 AF152562 AB590604 CU691298	-251697	+	AB464527 NM_012183	473821	+	TSC_hg19_v1_chr1_+_63789065 L12142	474176	+	NM_013339 AF063604 TSC_hg19_v1_chr1_+_63833313	518379	+	NM_032852|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_178221|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##AK027773|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC018678|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC033024|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC008395|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##DQ341187|DOCK7|85440|dedicator of cytokinesis 7##AK055401|DOCK7|85440|dedicator of cytokinesis 7##NM_033407|DOCK7|85440|dedicator of cytokinesis 7##AK292640|DOCK7|85440|dedicator of cytokinesis 7##NM_014495|ANGPTL3|27329|angiopoietin-like 3##AK315304|ANGPTL3|27329|angiopoietin-like 3##AK289426|ANGPTL3|27329|angiopoietin-like 3##BC007059|ANGPTL3|27329|angiopoietin-like 3##BC058287|ANGPTL3|27329|angiopoietin-like 3##AY358273|ANGPTL3|27329|angiopoietin-like 3##AF152562|ANGPTL3|27329|angiopoietin-like 3##NM_012183|FOXD3|27022|forkhead box D3##L12142|FOXD3|27022|forkhead box D3##NM_013339|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF063604|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	0.673776	CTCF.p2:15:0.674
chr16	55055866	55055973	reg1037864.p2	3.784	+	AY335945 BC131510 NM_001252197 NM_005853	-90809	+	AF275804 TSC_hg19_v1_chr16_-_54962719	-93204	-	TSC_hg19_v1_chr16_-_54320368 AY335943 NM_024336	-735526	-	AY335937 NM_024335	302551	+	TSC_hg19_v1_chr16_+_55513109 NM_004530 X58968 AK312711 BC002576 DQ891952 DQ895138 AB385158 CU678050 J03210	457201	+	AK310314 NM_001127891	459551	+	AY335945|IRX5|10265|iroquois homeobox 5##BC131510|IRX5|10265|iroquois homeobox 5##NM_001252197|IRX5|10265|iroquois homeobox 5##NM_005853|IRX5|10265|iroquois homeobox 5##AF275804|CRNDE|643911|colorectal neoplasia differentially expressed (non-protein coding)##AY335943|IRX3|79191|iroquois homeobox 3##NM_024336|IRX3|79191|iroquois homeobox 3##AY335937|IRX6|79190|iroquois homeobox 6##NM_024335|IRX6|79190|iroquois homeobox 6##NM_004530|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##X58968|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##AK312711|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##BC002576|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##DQ891952|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##DQ895138|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##J03210|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##AK310314|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)##NM_001127891|MMP2|4313|matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)	0.846014	CTCF.p2:13:0.846
chr16	734388	734455	reg1036076.p1	3.784	+	TSC_hg19_v1_chr16_-_734358 BC137100 BC137101 NM_001005920	-24	-	TSC_hg19_v1_chr16_-_734335 DQ074695 AF370420 BC073785	-89	-	TSC_hg19_v1_chr16_+_730430 BC007545 BC022788 AF129085 BC017178 AF039689 BC063617 AB587460 DQ893185 DQ896502	-3947	+	AL136863 NM_032259 AK301146	5981	-	TSC_hg19_v1_chr16_-_755827 BC036680 NM_153350	21394	-	TSC_hg19_v1_chr16_+_765128 BC000662 NM_024042	30704	+	BC137100|JMJD8|339123|jumonji domain containing 8##BC137101|JMJD8|339123|jumonji domain containing 8##NM_001005920|JMJD8|339123|jumonji domain containing 8##DQ074695|JMJD8|339123|jumonji domain containing 8##AF370420|JMJD8|339123|jumonji domain containing 8##BC073785|JMJD8|339123|jumonji domain containing 8##BC007545|STUB1|10273|STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase##BC022788|STUB1|10273|STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase##AF129085|STUB1|10273|STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase##BC017178|STUB1|10273|STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase##AF039689|STUB1|10273|STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase##BC063617|STUB1|10273|STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase##DQ893185|STUB1|10273|STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase##DQ896502|STUB1|10273|STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase##AL136863|WDR24|84219|WD repeat domain 24##NM_032259|WDR24|84219|WD repeat domain 24##AK301146|WDR24|84219|WD repeat domain 24##BC036680|FBXL16|146330|F-box and leucine-rich repeat protein 16##NM_153350|FBXL16|146330|F-box and leucine-rich repeat protein 16##BC000662|METRN|79006|meteorin, glial cell differentiation regulator##NM_024042|METRN|79006|meteorin, glial cell differentiation regulator	0.04329	
chr17	55603711	55603891	reg1038683.p1	3.784	+	AK093888 AX748353 NM_170721	-269428	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-269828	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-440658	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	323603	-	AK000746 NM_017949	376948	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	428875	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.0	
chr2	159725937	159726048	reg1034818.p1	3.784	+	AY324399 NM_001017920 AF086541 BC140719 BC127682 BC127683	-74157	+	TSC_hg19_v1_chr2_+_159313484 NM_001005476 NM_003628 BC048013 X81889 BC050308 BC041163	-412409	+	TSC_hg19_v1_chr2_+_159313419 BC034473	-412557	+	TSC_hg19_v1_chr2_+_159825151 BC037329 NM_001145909 NM_033394 AK128859	99155	+	AK093494 AX748164 NM_152528 AK129983 NM_001128213 TSC_hg19_v1_chr2_-_160143234 BC029520 NM_001128212	417156	-	AK127551 BC107570 TSC_hg19_v1_chr2_-_160472070	746022	-	AY324399|DAPL1|92196|death associated protein-like 1##NM_001017920|DAPL1|92196|death associated protein-like 1##AF086541|DAPL1|92196|death associated protein-like 1##BC140719|DAPL1|92196|death associated protein-like 1##BC127682|DAPL1|92196|death associated protein-like 1##BC127683|DAPL1|92196|death associated protein-like 1##NM_001005476|PKP4|8502|plakophilin 4##NM_003628|PKP4|8502|plakophilin 4##BC048013|PKP4|8502|plakophilin 4##X81889|PKP4|8502|plakophilin 4##BC050308|PKP4|8502|plakophilin 4##BC041163|PKP4|8502|plakophilin 4##BC034473|PKP4|8502|plakophilin 4##BC037329|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_001145909|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##NM_033394|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK128859|TANC1|85461|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1##AK093494|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_152528|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK129983|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128213|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##BC029520|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##NM_001128212|WDSUB1|151525|WD repeat, sterile alpha motif and U-box domain containing 1##AK127551|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B##BC107570|BAZ2B|29994|bromodomain adjacent to zinc finger domain, 2B	0.740157	CTCF.p2:-12:0.740
chr2	198192740	198192861	reg1035418.p1	3.784	+	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	-17281	-	TSC_hg19_v1_chr2_-_198175459 BC063622	-17327	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	-17418	-	AF054284 TSC_hg19_v1_chr2_-_198299735 BC039020 AF086296 BC064335	106929	-	BC046140 BC107883 TSC_hg19_v1_chr2_-_198299753 AK290470 BC029418 BC015530	106951	-	BC056155 AK308122 TSC_hg19_v1_chr2_-_198299772 NM_001005526 NM_012433 AK294851	106985	-	BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##AK124039|ANKRD44|91526|ankyrin repeat domain 44##AF054284|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC039020|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AF086296|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC064335|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC046140|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC107883|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AK290470|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC029418|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC015530|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##BC056155|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AK308122|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##NM_001005526|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##NM_012433|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa##AK294851|SF3B1|23451|splicing factor 3b, subunit 1, 155kDa	0.0	
chr5	10632462	10632611	reg1028311.p2	3.784	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	-68094	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-190384	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-190533	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	128723	-	TSC_hg19_v1_chr5_-_10761341 BC002726	128806	-	TSC_hg19_v1_chr5_-_10761361 NM_004394	128863	-	NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein##NM_004394|DAP|1611|death-associated protein	0.0	
chr1	208081547	208081633	reg1033910.p2	3.783	+	BX640941 TSC_hg19_v1_chr1_-_208059392	-22267	-	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	-156107	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	-156197	+	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	2793	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	2967	-	TSC_hg19_v1_chr1_-_208417635 NM_025179	336059	-	BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule##NM_025179|PLXNA2|5362|plexin A2	0.497794	CTCF.p2:-6:0.498
chr12	19660826	19661002	reg1032981.p2	3.783	+	BC015624 TSC_hg19_v1_chr12_+_19593196 EU446564	-67726	+	TSC_hg19_v1_chr12_+_19592783 AB209384	-68119	+	TSC_hg19_v1_chr12_+_19592425 AK131361 NM_001114176 NM_153207 AK126973 BC022220	-68395	+	BC117369 BC117371 NM_000921 M91667 AJ005036 U36798	861284	+	AK308317 NM_001244683	1063883	+	NM_001145945 NM_001145946 AK308729 AK296236 AF205076 NM_001145944 NM_017435 AK303713 AK294333 BC022461 AF260704	1187581	+	BC015624|AEBP2|121536|AE binding protein 2##EU446564|AEBP2|121536|AE binding protein 2##AB209384|AEBP2|121536|AE binding protein 2##AK131361|AEBP2|121536|AE binding protein 2##NM_001114176|AEBP2|121536|AE binding protein 2##NM_153207|AEBP2|121536|AE binding protein 2##AK126973|AEBP2|121536|AE binding protein 2##BC022220|AEBP2|121536|AE binding protein 2##BC117369|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##BC117371|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_000921|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##M91667|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AJ005036|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##U36798|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##AK308317|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001244683|PDE3A|5139|phosphodiesterase 3A, cGMP-inhibited##NM_001145945|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145946|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK308729|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK296236|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF205076|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_001145944|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##NM_017435|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK303713|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AK294333|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##BC022461|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1##AF260704|SLCO1C1|53919|solute carrier organic anion transporter family, member 1C1	0.918185	CTCF.p2:42:0.918
chr12	9288023	9288108	reg1030024.p1	3.783	+	TSC_hg19_v1_chr12_-_9268536 NM_000014	-19507	-	BC026246 TSC_hg19_v1_chr12_-_9268516 BX647329 CR749334	-19549	-	TSC_hg19_v1_chr12_-_9268510 M11313 BC040071 AY591530	-19572	-	BC111756 AK313639 NM_002864 X54380	72897	-	TSC_hg19_v1_chr12_+_9436619 AK123583 AK309820	148560	+	TSC_hg19_v1_chr12_-_9600810 BC035635 BC128040 BC111733	312733	-	NM_000014|A2M|2|alpha-2-macroglobulin##BC026246|A2M|2|alpha-2-macroglobulin##BX647329|A2M|2|alpha-2-macroglobulin##CR749334|A2M|2|alpha-2-macroglobulin##M11313|A2M|2|alpha-2-macroglobulin##BC040071|A2M|2|alpha-2-macroglobulin##AY591530|A2M|2|alpha-2-macroglobulin##BC111756|PZP|5858|pregnancy-zone protein##AK313639|PZP|5858|pregnancy-zone protein##NM_002864|PZP|5858|pregnancy-zone protein##X54380|PZP|5858|pregnancy-zone protein##AK309820|LOC642846|642846|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like##BC035635|DDX12P|440081|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12, pseudogene##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11	0.993905	CTCF.p2:2:0.994
chr17	42173287	42173360	reg1038497.p1	3.783	+	NM_138387 TSC_hg19_v1_chr17_+_42148102 BC021574 BC062596 AK091417 AX746969 BC002494	-25124	+	BC066298 NM_152344	-28337	-	TSC_hg19_v1_chr17_-_42144008 AK055218 BC044587 BC105288	-29307	-	TSC_hg19_v1_chr17_-_42201007 AK294760 AB011172	27659	-	TSC_hg19_v1_chr17_-_42201010 NM_001015053 NM_005474	27693	-	TSC_hg19_v1_chr17_+_42219297 NM_001171251 NM_024032 AK291924	45943	+	NM_138387|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC021574|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC062596|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC002494|G6PC3|92579|glucose 6 phosphatase, catalytic, 3##BC066298|LSM12|124801|LSM12 homolog (S. cerevisiae)##NM_152344|LSM12|124801|LSM12 homolog (S. cerevisiae)##AK055218|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC044587|LSM12|124801|LSM12 homolog (S. cerevisiae)##BC105288|LSM12|124801|LSM12 homolog (S. cerevisiae)##AK294760|HDAC5|10014|histone deacetylase 5##AB011172|HDAC5|10014|histone deacetylase 5##NM_001015053|HDAC5|10014|histone deacetylase 5##NM_005474|HDAC5|10014|histone deacetylase 5##NM_001171251|C17orf53|78995|chromosome 17 open reading frame 53##NM_024032|C17orf53|78995|chromosome 17 open reading frame 53##AK291924|C17orf53|78995|chromosome 17 open reading frame 53	0.0	
chr17	7760410	7760508	reg1038386.p1	3.783	+	TSC_hg19_v1_chr17_+_7758383 AK000032 BC057812 NM_203411	-2077	+	AB002344 NM_001080424	-17226	+	TSC_hg19_v1_chr17_+_7741696 BC067879	-18786	+	DQ893290 DQ893319 DQ896634 AF530060 CU687386 BC059944 TSC_hg19_v1_chr17_-_7760878 BC006407	361	-	AK057061 NM_144607	604	+	BC033861 NM_032356 BC051846 TSC_hg19_v1_chr17_-_7761246	749	-	AK000032|TMEM88|92162|transmembrane protein 88##BC057812|TMEM88|92162|transmembrane protein 88##NM_203411|TMEM88|92162|transmembrane protein 88##AB002344|KDM6B|23135|lysine (K)-specific demethylase 6B##NM_001080424|KDM6B|23135|lysine (K)-specific demethylase 6B##DQ893290|LSMD1|84316|LSM domain containing 1##DQ893319|LSMD1|84316|LSM domain containing 1##DQ896634|LSMD1|84316|LSM domain containing 1##AF530060|LSMD1|84316|LSM domain containing 1##BC059944|LSMD1|84316|LSM domain containing 1##BC006407|LSMD1|84316|LSM domain containing 1##AK057061|CYB5D1|124637|cytochrome b5 domain containing 1##NM_144607|CYB5D1|124637|cytochrome b5 domain containing 1##BC033861|LSMD1|84316|LSM domain containing 1##NM_032356|LSMD1|84316|LSM domain containing 1##BC051846|LSMD1|84316|LSM domain containing 1	0.0	
chr19	33467363	33467486	reg1018921.p2	3.783	+	AK309396 NM_152266 AK128668 BC020247 BC010170 BC003535	-4254	+	BC029978 TSC_hg19_v1_chr19_-_33462855 AK001375 BC136328 AL832158 BC032307 NM_032816	-4581	-	BC029802 AF141289 AB033548 AK026446 AK223147 AK313708 BC017962 NM_001126335 NM_001243036 NM_014270	-106763	-	AF423421 AJ347750 DQ892111 DQ895305 TSC_hg19_v1_chr19_-_33555795 AF268032 AK098246 AK300775 AK315105 BC036447 NM_033103	88366	-	BC006108 NM_018025	104361	+	BC031227 NM_173479 AB527326	155612	+	NM_152266|C19orf40|91442|chromosome 19 open reading frame 40##AK128668|C19orf40|91442|chromosome 19 open reading frame 40##BC020247|C19orf40|91442|chromosome 19 open reading frame 40##BC010170|C19orf40|91442|chromosome 19 open reading frame 40##BC003535|C19orf40|91442|chromosome 19 open reading frame 40##BC029978|CEP89|84902|centrosomal protein 89kDa##BC136328|CEP89|84902|centrosomal protein 89kDa##AL832158|CEP89|84902|centrosomal protein 89kDa##BC032307|CEP89|84902|centrosomal protein 89kDa##NM_032816|CEP89|84902|centrosomal protein 89kDa##BC029802|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AF141289|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AB033548|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AK026446|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AK223147|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AK313708|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##BC017962|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##NM_001126335|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##NM_001243036|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##NM_014270|SLC7A9|11136|solute carrier family 7 (glycoprotein-associated amino acid transporter light chain, bo,+ system), member 9##AF423421|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AJ347750|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ892111|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ895305|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AF268032|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK098246|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK300775|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK315105|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##BC036447|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##NM_033103|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##BC006108|GPATCH1|55094|G patch domain containing 1##NM_018025|GPATCH1|55094|G patch domain containing 1##BC031227|WDR88|126248|WD repeat domain 88##NM_173479|WDR88|126248|WD repeat domain 88	0.0	
chr2	63714221	63714302	reg1039350.p1	3.783	+	NM_014562 TSC_hg19_v1_chr2_+_63277964 AK095680 AK297308 BC007621	-436296	+	NM_001199770	-437070	+	BC029477 NM_001142614	-780231	+	TSC_hg19_v1_chr2_-_63815560 AK310290	101279	-	TSC_hg19_v1_chr2_-_63815583 BX538331 AK055030 AL833623	101356	-	NM_005917	101481	+	NM_014562|OTX1|5013|orthodenticle homeobox 1##AK095680|OTX1|5013|orthodenticle homeobox 1##AK297308|OTX1|5013|orthodenticle homeobox 1##BC007621|OTX1|5013|orthodenticle homeobox 1##NM_001199770|OTX1|5013|orthodenticle homeobox 1##BC029477|EHBP1|23301|EH domain binding protein 1##NM_001142614|EHBP1|23301|EH domain binding protein 1##AK310290|WDPCP|51057|WD repeat containing planar cell polarity effector##BX538331|WDPCP|51057|WD repeat containing planar cell polarity effector##AK055030|WDPCP|51057|WD repeat containing planar cell polarity effector##AL833623|WDPCP|51057|WD repeat containing planar cell polarity effector##NM_005917|MDH1|4190|malate dehydrogenase 1, NAD (soluble)	0.8524	CTCF.p2:33:0.852
chr3	149373778	149373900	reg1036737.p2	3.783	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-181350	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-181437	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-278297	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	1896	-	AK022036 NM_001168278	47220	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	96400	-	AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2	0.0	
chr3	150804578	150804698	reg1033257.p2	3.783	+	TSC_hg19_v1_chr3_+_150803504 AK128165	-1133	+	AF482697 NM_001195794 NM_174878	-113853	-	AF388366 AF388368 NM_052995	-142616	-	AF399708 NM_053002 BC144559	39	+	AF002986 BC036815 NM_013308	116328	-	AK289617 NM_001081455	162311	-	AK128165|MED12L|116931|mediator complex subunit 12-like##AF482697|CLRN1|7401|clarin 1##NM_001195794|CLRN1|7401|clarin 1##NM_174878|CLRN1|7401|clarin 1##AF388366|CLRN1|7401|clarin 1##AF388368|CLRN1|7401|clarin 1##NM_052995|CLRN1|7401|clarin 1##AF399708|MED12L|116931|mediator complex subunit 12-like##NM_053002|MED12L|116931|mediator complex subunit 12-like##BC144559|MED12L|116931|mediator complex subunit 12-like##AF002986|GPR171|29909|G protein-coupled receptor 171##BC036815|GPR171|29909|G protein-coupled receptor 171##NM_013308|GPR171|29909|G protein-coupled receptor 171##AK289617|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14##NM_001081455|P2RY14|9934|purinergic receptor P2Y, G-protein coupled, 14	0.075021	
chr3	196565133	196565226	reg1001848.p2	3.783	+	TSC_hg19_v1_chr3_+_196466844 AK291339	-98354	+	TSC_hg19_v1_chr3_+_196466727 NM_002577	-98454	+	TSC_hg19_v1_chr3_+_196439214 NM_001166304 NM_017861 AK000529 BC022542	-125920	+	TSC_hg19_v1_chr3_+_196594754 AK302305 NM_152699 AK313764	29553	+	TSC_hg19_v1_chr3_+_196594770 BC030705	29591	+	AK093216 AK297506 TSC_hg19_v1_chr3_-_196669320	104112	-	AK291339|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2##NM_002577|PAK2|5062|p21 protein (Cdc42/Rac)-activated kinase 2##NM_001166304|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##NM_017861|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##AK000529|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##BC022542|PIGX|54965|phosphatidylinositol glycan anchor biosynthesis, class X##AK302305|SENP5|205564|SUMO1/sentrin specific peptidase 5##NM_152699|SENP5|205564|SUMO1/sentrin specific peptidase 5##AK313764|SENP5|205564|SUMO1/sentrin specific peptidase 5##BC030705|SENP5|205564|SUMO1/sentrin specific peptidase 5##AK093216|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AK297506|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa	0.0	
chr6	116723370	116723550	reg1036907.p2	3.783	+	TSC_hg19_v1_chr6_-_116692863 AK298559 AK316303	-30591	-	TSC_hg19_v1_chr6_+_116692109 NM_013352 AF098066	-31317	+	BC039245 NM_001080976 BC043526	-122139	+	NM_001010919	59095	+	BC032556 NM_153711 AK094140 AK315572	109361	+	AK300309 AY358252 NM_153036 BC057769 AK056801	126748	+	AK298559|LOC100287467|100287467|uncharacterized LOC100287467##AK316303|LOC100287467|100287467|uncharacterized LOC100287467##NM_013352|DSE|29940|dermatan sulfate epimerase##AF098066|DSE|29940|dermatan sulfate epimerase##BC039245|DSE|29940|dermatan sulfate epimerase##NM_001080976|DSE|29940|dermatan sulfate epimerase##BC043526|DSE|29940|dermatan sulfate epimerase##NM_001010919|FAM26F|441168|family with sequence similarity 26, member F##BC032556|FAM26E|254228|family with sequence similarity 26, member E##NM_153711|FAM26E|254228|family with sequence similarity 26, member E##AK094140|FAM26E|254228|family with sequence similarity 26, member E##AK315572|FAM26E|254228|family with sequence similarity 26, member E##AK300309|FAM26D|221301|family with sequence similarity 26, member D##AY358252|FAM26D|221301|family with sequence similarity 26, member D##NM_153036|FAM26D|221301|family with sequence similarity 26, member D##BC057769|FAM26D|221301|family with sequence similarity 26, member D##AK056801|FAM26D|221301|family with sequence similarity 26, member D	0.0	
chr6	64229370	64229519	reg1028535.p2	3.783	+	DQ682605 DQ682606 BC130366 BC130368 AF242388 NM_001143940 NM_016571	-199580	-	CU689822 TSC_hg19_v1_chr6_-_62996128 AY077838 AK292043 AK095983 NM_152688 BC034043	-1233443	-	BC017330 BC030061 TSC_hg19_v1_chr6_-_58287674 BC011838 BC144584 BC144585 BC065547	-5941765	-	TSC_hg19_v1_chr6_+_64231650 CR749458	2211	+	TSC_hg19_v1_chr6_+_64281913 BC045571 NM_003463	52472	+	TSC_hg19_v1_chr6_+_64282432 AK312526	52991	+	DQ682605|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##DQ682606|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130366|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##BC130368|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AF242388|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_001143940|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##NM_016571|LGSN|51557|lengsin, lens protein with glutamine synthetase domain##AY077838|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK292043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##AK095983|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##NM_152688|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC034043|KHDRBS2|202559|KH domain containing, RNA binding, signal transduction associated 2##BC017330|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC030061|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC011838|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144584|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC144585|GUSBP4|375513|glucuronidase, beta pseudogene 4##BC065547|GUSBP4|375513|glucuronidase, beta pseudogene 4##CR749458|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##BC045571|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##NM_003463|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1##AK312526|PTP4A1|7803|protein tyrosine phosphatase type IVA, member 1	0.032526	
chr8	48420276	48420398	reg1040685.p1	3.783	+	TSC_hg19_v1_chr8_+_48173546 D63480 BC031627 AK293809 AK293972 AK294275 AK297681	-246797	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	-246805	+	TSC_hg19_v1_chr8_+_48173521 AK303579	-246818	+	EU831483 EU831570 TSC_hg19_v1_chr8_-_48650683	230347	-	TSC_hg19_v1_chr8_-_48650725 BC023510 BC105109 NM_005195 M83667	230399	-	TSC_hg19_v1_chr8_-_48872697 AK296833	452352	-	D63480|KIAA0146|23514|KIAA0146##AK293809|KIAA0146|23514|KIAA0146##AK293972|KIAA0146|23514|KIAA0146##AK294275|KIAA0146|23514|KIAA0146##AK297681|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##EU831483|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##EU831570|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##BC105109|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##NM_005195|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##M83667|CEBPD|1052|CCAAT/enhancer binding protein (C/EBP), delta##AK296833|PRKDC|5591|protein kinase, DNA-activated, catalytic polypeptide	0.140894	
chrX	13069764	13069895	reg1040090.p1	3.783	+	BX647580 AK313776 AF494345 BX648111 BX648919 NM_174901	-7011	-	TSC_hg19_v1_chrX_+_12994293 BC104464 BC104465 BT007090 X02493	-75486	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	-76589	+	AB050195 TSC_hg19_v1_chrX_-_13338140 BC137186 BC137187	268309	-	AK302365 NM_001135995	268688	-	TSC_hg19_v1_chrX_-_13397507 D28370	327676	-	BX647580|FAM9C|171484|family with sequence similarity 9, member C##AK313776|FAM9C|171484|family with sequence similarity 9, member C##AF494345|FAM9C|171484|family with sequence similarity 9, member C##BX648111|FAM9C|171484|family with sequence similarity 9, member C##BX648919|FAM9C|171484|family with sequence similarity 9, member C##NM_174901|FAM9C|171484|family with sequence similarity 9, member C##BC104464|TMSB4X|7114|thymosin beta 4, X-linked##BC104465|TMSB4X|7114|thymosin beta 4, X-linked##BT007090|TMSB4X|7114|thymosin beta 4, X-linked##X02493|TMSB4X|7114|thymosin beta 4, X-linked##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked##AB050195|ATXN3L|92552|ataxin 3-like##BC137186|ATXN3L|92552|ataxin 3-like##BC137187|ATXN3L|92552|ataxin 3-like##AK302365|ATXN3L|92552|ataxin 3-like##NM_001135995|ATXN3L|92552|ataxin 3-like	0.0	
chr11	70073219	70073345	reg1045591.p1	3.782	+	NM_003824 TSC_hg19_v1_chr11_+_70049420 AK291005 AK293320 BC000334 X84709 U24231 BC025733 EU176185 AB587588 AY423721 BT006927 CR456738	-23866	+	AY728143 NM_018043 TSC_hg19_v1_chr11_+_69924473	-148842	+	NM_005247	-439091	-	TSC_hg19_v1_chr11_+_70116795 NM_003626 NM_177423	43522	+	TSC_hg19_v1_chr11_+_70116841 BC034046 AB209314	43579	+	D49354 TSC_hg19_v1_chr11_+_70194450	121139	+	NM_003824|FADD|8772|Fas (TNFRSF6)-associated via death domain##AK291005|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC000334|FADD|8772|Fas (TNFRSF6)-associated via death domain##X84709|FADD|8772|Fas (TNFRSF6)-associated via death domain##U24231|FADD|8772|Fas (TNFRSF6)-associated via death domain##BC025733|FADD|8772|Fas (TNFRSF6)-associated via death domain##EU176185|FADD|8772|Fas (TNFRSF6)-associated via death domain##AY423721|FADD|8772|Fas (TNFRSF6)-associated via death domain##BT006927|FADD|8772|Fas (TNFRSF6)-associated via death domain##CR456738|FADD|8772|Fas (TNFRSF6)-associated via death domain##AY728143|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_018043|ANO1|55107|anoctamin 1, calcium activated chloride channel##NM_005247|FGF3|2248|fibroblast growth factor 3##NM_003626|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##NM_177423|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##BC034046|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##AB209314|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1##D49354|PPFIA1|8500|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1	0.0	
chr1	205641372	205641517	reg1041262.p1	3.782	+	NM_001973 NM_021795	-39445	-	BC063676 M85164 M85165 TSC_hg19_v1_chr1_-_205601025 BC040145	-40538	-	BC036549 AK091896 AX747240 TSC_hg19_v1_chr1_+_205538184 AK304120 AK090831 AX746641 AK295148	-103231	+	BC050416 AY033593 TSC_hg19_v1_chr1_-_205649588	8124	-	AK313479 TSC_hg19_v1_chr1_-_205649636 AK290364 FJ805258 FJ805259 FJ805260 FJ805261 NM_033102 EF632109	8237	-	TSC_hg19_v1_chr1_-_205719084 CR457339 AB528490 DQ891218 DQ894401	77645	-	NM_001973|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##NM_021795|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC063676|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85164|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##M85165|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC040145|ELK4|2005|ELK4, ETS-domain protein (SRF accessory protein 1)##BC036549|MFSD4|148808|major facilitator superfamily domain containing 4##AK091896|MFSD4|148808|major facilitator superfamily domain containing 4##AK304120|MFSD4|148808|major facilitator superfamily domain containing 4##AK090831|MFSD4|148808|major facilitator superfamily domain containing 4##AK295148|MFSD4|148808|major facilitator superfamily domain containing 4##BC050416|SLC45A3|85414|solute carrier family 45, member 3##AY033593|SLC45A3|85414|solute carrier family 45, member 3##AK313479|SLC45A3|85414|solute carrier family 45, member 3##AK290364|SLC45A3|85414|solute carrier family 45, member 3##NM_033102|SLC45A3|85414|solute carrier family 45, member 3##CR457339|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1##DQ891218|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1##DQ894401|NUCKS1|64710|nuclear casein kinase and cyclin-dependent kinase substrate 1	0.015674	
chr12	98653583	98653720	reg1034393.p1	3.782	+	BC027605 NM_001135175	-1352408	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-1352620	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-1859334	-	TSC_hg19_v1_chr12_-_98897622 AK126817	243976	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	255716	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	255756	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.0	
chr13	60971162	60971293	reg1017749.p2	3.782	+	BX537910 NM_001146071 NM_030794	-637	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-233126	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	-233246	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	252	+	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	1018026	-	AK289924 NM_022843	1018427	-	BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20	0.0	
chr16	66684978	66685097	reg1039077.p1	3.782	+	TSC_hg19_v1_chr16_+_66638658 BC023509 BC023591	-46357	+	TSC_hg19_v1_chr16_+_66638636 AY166714	-46396	+	TSC_hg19_v1_chr16_+_66638606 BC047701 NM_181553 BC036042 BC040227	-46463	+	TSC_hg19_v1_chr16_-_66730647 BC093679 AF479814 AF521889 AF521890 NM_178818 NM_181521	45595	-	TSC_hg19_v1_chr16_-_66785505 AK304233 AF035812 BC025959 AK291766 AK303031 BX648863	100455	-	BC010928 TSC_hg19_v1_chr16_-_66785513 AK295049 NM_006141	100525	-	BC023509|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC023591|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##AY166714|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC047701|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##NM_181553|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC036042|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC040227|CMTM3|123920|CKLF-like MARVEL transmembrane domain containing 3##BC093679|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF479814|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521889|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AF521890|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_178818|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##NM_181521|CMTM4|146223|CKLF-like MARVEL transmembrane domain containing 4##AK304233|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AF035812|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC025959|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK291766|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK303031|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BX648863|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##BC010928|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##AK295049|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2##NM_006141|DYNC1LI2|1783|dynein, cytoplasmic 1, light intermediate chain 2	0.0	
chr1	92348956	92349052	reg1014007.p1	3.782	+	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	-382323	+	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	-382585	+	TSC_hg19_v1_chr1_-_91870367 AB058637 AK294754 AK302582 AB058636 AB204867 NM_001017975	-478632	-	AK291345 BC126116 BC136295 BC143869 TSC_hg19_v1_chr1_-_92351559	2513	-	AK225799 TSC_hg19_v1_chr1_-_92351709 NM_001195683 NM_003243	2743	-	L07594 NM_001195684	22554	-	NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB058637|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK294754|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK302582|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB058636|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB204867|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001017975|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK291345|TGFBR3|7049|transforming growth factor, beta receptor III##BC126116|TGFBR3|7049|transforming growth factor, beta receptor III##BC136295|TGFBR3|7049|transforming growth factor, beta receptor III##BC143869|TGFBR3|7049|transforming growth factor, beta receptor III##AK225799|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195683|TGFBR3|7049|transforming growth factor, beta receptor III##NM_003243|TGFBR3|7049|transforming growth factor, beta receptor III##L07594|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195684|TGFBR3|7049|transforming growth factor, beta receptor III	0.0	
chr1	97652094	97652175	reg1038363.p2	3.782	+	BC030757 TSC_hg19_v1_chr1_+_97260652	-391551	+	NM_021190 TSC_hg19_v1_chr1_+_97187343 AK092216 AB051232 AK299755 AK299922 AB209266 AF530580 AF530581 AF176085 AK299897 BC016582 AB051233	-464850	+	AB055763 TSC_hg19_v1_chr1_-_97145197	-506938	-	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	734355	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	734425	-	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	734472	-	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2##AK092216|PTBP2|58155|polypyrimidine tract binding protein 2##AB051232|PTBP2|58155|polypyrimidine tract binding protein 2##AK299755|PTBP2|58155|polypyrimidine tract binding protein 2##AK299922|PTBP2|58155|polypyrimidine tract binding protein 2##AB209266|PTBP2|58155|polypyrimidine tract binding protein 2##AF530580|PTBP2|58155|polypyrimidine tract binding protein 2##AF530581|PTBP2|58155|polypyrimidine tract binding protein 2##AF176085|PTBP2|58155|polypyrimidine tract binding protein 2##AK299897|PTBP2|58155|polypyrimidine tract binding protein 2##BC016582|PTBP2|58155|polypyrimidine tract binding protein 2##AB051233|PTBP2|58155|polypyrimidine tract binding protein 2##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase	0.997843	CTCF.p2:-9:0.998
chr2	219523672	219523852	reg1013569.p2	3.782	+	BC006355 AK023083 AK297808 TSC_hg19_v1_chr2_+_219472641	-51125	+	TSC_hg19_v1_chr2_+_219472618 AK057186 AK223203 AK299458	-51143	+	NM_032726 AY512961 TSC_hg19_v1_chr2_+_219472601	-51215	+	TSC_hg19_v1_chr2_-_219524332 BC038226 D87073 NM_001105537 BC033631 BC053849	519	-	NM_001079866 NM_004328 TSC_hg19_v1_chr2_+_219524442 BX571752 AK289363 AF038195	649	+	TSC_hg19_v1_chr2_+_219524452 BC000416 BC007500 AF026849 AK096210	713	+	BC006355|PLCD4|84812|phospholipase C, delta 4##AK023083|PLCD4|84812|phospholipase C, delta 4##AK297808|PLCD4|84812|phospholipase C, delta 4##AK057186|PLCD4|84812|phospholipase C, delta 4##AK223203|PLCD4|84812|phospholipase C, delta 4##AK299458|PLCD4|84812|phospholipase C, delta 4##NM_032726|PLCD4|84812|phospholipase C, delta 4##AY512961|PLCD4|84812|phospholipase C, delta 4##BC038226|ZNF142|7701|zinc finger protein 142##D87073|ZNF142|7701|zinc finger protein 142##NM_001105537|ZNF142|7701|zinc finger protein 142##BC033631|ZNF142|7701|zinc finger protein 142##BC053849|ZNF142|7701|zinc finger protein 142##NM_001079866|BCS1L|617|BCS1-like (S. cerevisiae)##NM_004328|BCS1L|617|BCS1-like (S. cerevisiae)##BX571752|BCS1L|617|BCS1-like (S. cerevisiae)##AK289363|BCS1L|617|BCS1-like (S. cerevisiae)##AF038195|BCS1L|617|BCS1-like (S. cerevisiae)##BC000416|BCS1L|617|BCS1-like (S. cerevisiae)##BC007500|BCS1L|617|BCS1-like (S. cerevisiae)##AF026849|BCS1L|617|BCS1-like (S. cerevisiae)##AK096210|BCS1L|617|BCS1-like (S. cerevisiae)	0.0	
chr3	195887004	195887133	reg1029914.p2	3.782	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-78052	-	TSC_hg19_v1_chr3_-_195808984 M11507	-78085	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-78107	-	BC034801 BC022078 NM_001039617 AK122907	51213	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	56326	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	127467	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr6_qbl_hap6	1742896	1742989	reg1033043.p1	3.782	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.01334	
chr9	35661299	35661440	reg1033042.p2	3.782	+	TSC_hg19_v1_chr9_+_35658352 BC051285 BC018758 AK307223 CU676316 DQ884403 DQ891940 DQ895126	-3028	+	TSC_hg19_v1_chr9_+_35658298 NM_001195200 NM_001195201 NM_001195217 NM_174923 AK075523	-3083	+	AB527705 TSC_hg19_v1_chr9_-_35650929 AK314758 AJ010059 BC102029 BC104491 BC107484 NM_014450	-10470	-	TSC_hg19_v1_chr9_-_35665187 CU689686 AK027548 AK225501	3794	-	AK303513 TSC_hg19_v1_chr9_-_35665193 AK225529	3822	-	TSC_hg19_v1_chr9_-_35665222 BC033666 NM_032818 AY390225 AY390226	3874	-	BC051285|CCDC107|203260|coiled-coil domain containing 107##BC018758|CCDC107|203260|coiled-coil domain containing 107##AK307223|CCDC107|203260|coiled-coil domain containing 107##DQ884403|CCDC107|203260|coiled-coil domain containing 107##DQ891940|CCDC107|203260|coiled-coil domain containing 107##DQ895126|CCDC107|203260|coiled-coil domain containing 107##NM_001195200|CCDC107|203260|coiled-coil domain containing 107##NM_001195201|CCDC107|203260|coiled-coil domain containing 107##NM_001195217|CCDC107|203260|coiled-coil domain containing 107##NM_174923|CCDC107|203260|coiled-coil domain containing 107##AK075523|CCDC107|203260|coiled-coil domain containing 107##AK314758|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##AJ010059|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##BC102029|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##BC104491|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##BC107484|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##NM_014450|SIT1|27240|signaling threshold regulating transmembrane adaptor 1##AK027548|C9orf100|84904|chromosome 9 open reading frame 100##AK225501|C9orf100|84904|chromosome 9 open reading frame 100##AK303513|C9orf100|84904|chromosome 9 open reading frame 100##AK225529|C9orf100|84904|chromosome 9 open reading frame 100##BC033666|C9orf100|84904|chromosome 9 open reading frame 100##NM_032818|C9orf100|84904|chromosome 9 open reading frame 100##AY390225|C9orf100|84904|chromosome 9 open reading frame 100##AY390226|C9orf100|84904|chromosome 9 open reading frame 100	0.0	
chr10	81006247	81006427	reg1033809.p2	3.781	+	TSC_hg19_v1_chr10_+_81003207 AB033050	-3207	+	TSC_hg19_v1_chr10_+_80899458 AK025812	-106853	+	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	-177549	+	AK299728 TSC_hg19_v1_chr10_+_81065901	59551	+	TSC_hg19_v1_chr10_+_81070578 BC025342 BC068072	64307	+	AL049432 TSC_hg19_v1_chr10_+_81073775 AK023603	67502	+	AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK299728|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC025342|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC068072|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AL049432|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK023603|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.0	
chr16	19595172	19595267	reg1040756.p2	3.781	+	TSC_hg19_v1_chr16_+_19567045 BX537867 AK095078 AK290286 AL832159 BC058845 AL833428 EU831926 EU832021	-28183	+	AK294885 NM_020314	-28483	+	NM_001199022 NM_014711 TSC_hg19_v1_chr16_+_19535277 BC036654 AK300426 AB007879 CR749255 BC030223	-59988	+	TSC_hg19_v1_chr16_+_19727698 AF520569 AF520570 AK000122 NM_153208	132518	+	TSC_hg19_v1_chr16_-_19729532 BC117562 NM_001012991	134268	-	AK295204 AF202640 TSC_hg19_v1_chr16_-_19896168 BC034467 AF181862 NM_016235 AK294680 AK075119 AK315989 AK296754	300945	-	BX537867|C16orf62|57020|chromosome 16 open reading frame 62##AK095078|C16orf62|57020|chromosome 16 open reading frame 62##AK290286|C16orf62|57020|chromosome 16 open reading frame 62##AL832159|C16orf62|57020|chromosome 16 open reading frame 62##BC058845|C16orf62|57020|chromosome 16 open reading frame 62##AL833428|C16orf62|57020|chromosome 16 open reading frame 62##EU831926|C16orf62|57020|chromosome 16 open reading frame 62##EU832021|C16orf62|57020|chromosome 16 open reading frame 62##AK294885|C16orf62|57020|chromosome 16 open reading frame 62##NM_020314|C16orf62|57020|chromosome 16 open reading frame 62##NM_001199022|CCP110|9738|centriolar coiled coil protein 110kDa##NM_014711|CCP110|9738|centriolar coiled coil protein 110kDa##BC036654|CCP110|9738|centriolar coiled coil protein 110kDa##AK300426|CCP110|9738|centriolar coiled coil protein 110kDa##AB007879|CCP110|9738|centriolar coiled coil protein 110kDa##CR749255|CCP110|9738|centriolar coiled coil protein 110kDa##BC030223|CCP110|9738|centriolar coiled coil protein 110kDa##AF520569|IQCK|124152|IQ motif containing K##AF520570|IQCK|124152|IQ motif containing K##AK000122|IQCK|124152|IQ motif containing K##NM_153208|IQCK|124152|IQ motif containing K##BC117562|C16orf88|400506|chromosome 16 open reading frame 88##NM_001012991|C16orf88|400506|chromosome 16 open reading frame 88##AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B	0.0	
chr19	50312687	50312833	reg1037617.p2	3.781	+	TSC_hg19_v1_chr19_+_50304813 AK090661	-7953	+	TSC_hg19_v1_chr19_+_50270274 BC014214 AL136925 DQ892253 DQ895454 AB527855 CU676931	-42368	+	AK124343 TSC_hg19_v1_chr19_+_50270264	-42497	+	CU678728 CU679609 TSC_hg19_v1_chr19_-_50316535 BC010092 AK057964 BC004445 BC016793 AK026341 AK315445 AK295072 NM_001171937 NM_025129	3723	-	TSC_hg19_v1_chr19_+_50321555 NM_030973 AK055844 AK289460 AK307330 AK298897 AF261072 AJ617479 AL136746 BC065297 AY533507 EU392500 EU392501 EU392502 EU392503 EU392504 EU392505 EU392506 EU392507 EU392508 EU392509 EU392510 EU392511 EU392512 EU392513 EU392514 EU392515 EU392516 EU392517 EU392518 EU392519 EU832505 EU832586	8839	+	TSC_hg19_v1_chr19_+_50353947 AK057817 AY358168 AK294366	41257	+	BC014214|AP2A1|160|adaptor-related protein complex 2, alpha 1 subunit##AL136925|AP2A1|160|adaptor-related protein complex 2, alpha 1 subunit##DQ892253|AP2A1|160|adaptor-related protein complex 2, alpha 1 subunit##DQ895454|AP2A1|160|adaptor-related protein complex 2, alpha 1 subunit##AK124343|AP2A1|160|adaptor-related protein complex 2, alpha 1 subunit##BC010092|FUZ|80199|fuzzy homolog (Drosophila)##AK057964|FUZ|80199|fuzzy homolog (Drosophila)##BC004445|FUZ|80199|fuzzy homolog (Drosophila)##BC016793|FUZ|80199|fuzzy homolog (Drosophila)##AK026341|FUZ|80199|fuzzy homolog (Drosophila)##AK315445|FUZ|80199|fuzzy homolog (Drosophila)##AK295072|FUZ|80199|fuzzy homolog (Drosophila)##NM_001171937|FUZ|80199|fuzzy homolog (Drosophila)##NM_025129|FUZ|80199|fuzzy homolog (Drosophila)##NM_030973|MED25|81857|mediator complex subunit 25##AK055844|MED25|81857|mediator complex subunit 25##AK289460|MED25|81857|mediator complex subunit 25##AK307330|MED25|81857|mediator complex subunit 25##AK298897|MED25|81857|mediator complex subunit 25##AF261072|MED25|81857|mediator complex subunit 25##AJ617479|MED25|81857|mediator complex subunit 25##AL136746|MED25|81857|mediator complex subunit 25##BC065297|MED25|81857|mediator complex subunit 25##AY533507|MED25|81857|mediator complex subunit 25##EU392500|MED25|81857|mediator complex subunit 25##EU392501|MED25|81857|mediator complex subunit 25##EU392502|MED25|81857|mediator complex subunit 25##EU392503|MED25|81857|mediator complex subunit 25##EU392504|MED25|81857|mediator complex subunit 25##EU392505|MED25|81857|mediator complex subunit 25##EU392506|MED25|81857|mediator complex subunit 25##EU392507|MED25|81857|mediator complex subunit 25##EU392508|MED25|81857|mediator complex subunit 25##EU392509|MED25|81857|mediator complex subunit 25##EU392510|MED25|81857|mediator complex subunit 25##EU392511|MED25|81857|mediator complex subunit 25##EU392512|MED25|81857|mediator complex subunit 25##EU392513|MED25|81857|mediator complex subunit 25##EU392514|MED25|81857|mediator complex subunit 25##EU392515|MED25|81857|mediator complex subunit 25##EU392516|MED25|81857|mediator complex subunit 25##EU392517|MED25|81857|mediator complex subunit 25##EU392518|MED25|81857|mediator complex subunit 25##EU392519|MED25|81857|mediator complex subunit 25##EU832505|MED25|81857|mediator complex subunit 25##EU832586|MED25|81857|mediator complex subunit 25##AK057817|PTOV1|53635|prostate tumor overexpressed 1##AY358168|PTOV1|53635|prostate tumor overexpressed 1##AK294366|PTOV1|53635|prostate tumor overexpressed 1	0.269643	CTCF.p2:5:0.270
chr2	13196547	13196646	reg1030370.p1	3.781	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-338199	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	-338680	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-339343	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	1576225	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	1576255	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	2504833	-	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence	0.744841	CTCF.p2:-23:0.745
chr2	225751990	225752100	reg1043922.p1	3.781	+	TSC_hg19_v1_chr2_-_225450116 NM_003590	-301925	-	TSC_hg19_v1_chr2_-_225450056 BC039598	-301970	-	TSC_hg19_v1_chr2_-_225450043 AB014517 BC092409	-302004	-	TSC_hg19_v1_chr2_-_225811768 EU236710	59709	-	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	155303	-	NM_020864 BC131727 AB040919	513600	+	NM_003590|CUL3|8452|cullin 3##BC039598|CUL3|8452|cullin 3##AB014517|CUL3|8452|cullin 3##BC092409|CUL3|8452|cullin 3##EU236710|DOCK10|55619|dedicator of cytokinesis 10##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2	0.0	
chr3	142839231	142839409	reg1011122.p1	3.781	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-669	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-118890	+	TSC_hg19_v1_chr3_+_142682794 BC062727	-156490	+	BC067737 TSC_hg19_v1_chr3_+_142895211	55851	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	727947	-	NM_173552 AK315082	851332	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC062727|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58	0.0	
chr4	89744826	89744942	reg1037152.p1	3.781	+	AB385402 AB020721 TSC_hg19_v1_chr4_-_89744384 AK027138 BC033006 BC086875 BC058029 AK296932 NM_001015045 AK091787 AX747185	-603	-	BC104883 TSC_hg19_v1_chr4_-_89618996 AL834329 AK054689 BC022544 NM_153757	-125909	-	AK296379 TSC_hg19_v1_chr4_+_89513611 AK289990 BC038960 D25215 NM_014606	-231263	+	CU687656 BC063126 BC041029 BC053569 BX647410 NM_014883	233335	-	AK091881 AX747234 TSC_hg19_v1_chr4_-_90032571	287675	-	AK027653 NM_145715	289083	+	AB020721|FAM13A|10144|family with sequence similarity 13, member A##AK027138|FAM13A|10144|family with sequence similarity 13, member A##BC033006|FAM13A|10144|family with sequence similarity 13, member A##BC086875|FAM13A|10144|family with sequence similarity 13, member A##BC058029|FAM13A|10144|family with sequence similarity 13, member A##AK296932|FAM13A|10144|family with sequence similarity 13, member A##NM_001015045|FAM13A|10144|family with sequence similarity 13, member A##AK091787|FAM13A|10144|family with sequence similarity 13, member A##BC104883|NAP1L5|266812|nucleosome assembly protein 1-like 5##AL834329|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK054689|NAP1L5|266812|nucleosome assembly protein 1-like 5##BC022544|NAP1L5|266812|nucleosome assembly protein 1-like 5##NM_153757|NAP1L5|266812|nucleosome assembly protein 1-like 5##AK296379|HERC3|8916|hect domain and RLD 3##AK289990|HERC3|8916|hect domain and RLD 3##BC038960|HERC3|8916|hect domain and RLD 3##D25215|HERC3|8916|hect domain and RLD 3##NM_014606|HERC3|8916|hect domain and RLD 3##BC063126|FAM13A|10144|family with sequence similarity 13, member A##BC041029|FAM13A|10144|family with sequence similarity 13, member A##BC053569|FAM13A|10144|family with sequence similarity 13, member A##BX647410|FAM13A|10144|family with sequence similarity 13, member A##NM_014883|FAM13A|10144|family with sequence similarity 13, member A##AK091881|FAM13A|10144|family with sequence similarity 13, member A##AK027653|TIGD2|166815|tigger transposable element derived 2##NM_145715|TIGD2|166815|tigger transposable element derived 2	0.0	
chr6	135467410	135467590	reg1038250.p1	3.781	+	TSC_hg19_v1_chr6_-_135375958 AK024258 AK295545 AF161394 U87791 AJ459826 AJ459827 NM_001145158 NM_001145207 NM_006620	-91506	-	CU674720 EU831981 EU832074 TSC_hg19_v1_chr6_-_135375948 BC040849 AJ420551 BC001465	-91612	-	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	-196268	-	TSC_hg19_v1_chr6_+_135502445 AJ606317 AJ606318 AJ606319 AJ606320 AJ606321 AJ606322 AJ606323 AJ606324 NM_001130172 NM_001130173 NM_001161656 NM_001161657 NM_001161658 NM_001161659 NM_001161660 NM_005375 X52125	34948	+	TSC_hg19_v1_chr6_+_135502507 BC064955	34995	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	35086	+	AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)##AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)##AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)##U87791|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)##EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)##EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)##BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)##BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	0.0	
chr6	64406604	64406688	reg1037015.p1	3.781	+	AF091622 BC113650 BC113652 NM_015153 D87685 AB385299	-50204	+	TSC_hg19_v1_chr6_+_64346027 BX648268 AK290491	-60629	+	TSC_hg19_v1_chr6_+_64345729 AK315868 AK298580	-60823	+	AY358133 NM_198283 AK310478	1883059	-	FM209056 AB593112 AB593114 BX647741 BX537914 FJ416331 NM_001142800 NM_001142801	2010447	-	TSC_hg19_v1_chr6_-_68599062 BC065770 AJ431196 BC021996 BC107867 BC014322	4192382	-	AF091622|PHF3|23469|PHD finger protein 3##BC113650|PHF3|23469|PHD finger protein 3##BC113652|PHF3|23469|PHD finger protein 3##NM_015153|PHF3|23469|PHD finger protein 3##D87685|PHF3|23469|PHD finger protein 3##BX648268|PHF3|23469|PHD finger protein 3##AK290491|PHF3|23469|PHD finger protein 3##AK315868|PHF3|23469|PHD finger protein 3##AK298580|PHF3|23469|PHD finger protein 3##AY358133|EYS|346007|eyes shut homolog (Drosophila)##NM_198283|EYS|346007|eyes shut homolog (Drosophila)##AK310478|EYS|346007|eyes shut homolog (Drosophila)##FM209056|EYS|346007|eyes shut homolog (Drosophila)##AB593112|EYS|346007|eyes shut homolog (Drosophila)##AB593114|EYS|346007|eyes shut homolog (Drosophila)##BX647741|EYS|346007|eyes shut homolog (Drosophila)##BX537914|EYS|346007|eyes shut homolog (Drosophila)##FJ416331|EYS|346007|eyes shut homolog (Drosophila)##NM_001142800|EYS|346007|eyes shut homolog (Drosophila)##NM_001142801|EYS|346007|eyes shut homolog (Drosophila)##AJ431196|ERVH-3|100289683|endogenous retrovirus group H, member 3	0.0	
chr8	102914697	102914838	reg1027759.p1	3.781	+	NM_032041	-111329	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-111567	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-111584	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	221756	-	NM_001040630	222367	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	336406	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.017934	
chr8	8524760	8524852	reg1041699.p1	3.781	+	AK122582 NM_001080826	-285584	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-348918	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-438664	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	34892	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	226132	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	335559	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.0	
chr10	114080924	114081019	reg1032676.p1	3.780	+	BC113497 BC113499 AF312827 HQ258194 NM_058222	-37519	+	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	-137466	-	AB046780 TSC_hg19_v1_chr10_-_113933602	-147410	-	AK000339 TSC_hg19_v1_chr10_+_114133781	52807	+	TSC_hg19_v1_chr10_+_114133873 NM_203379	52932	+	TSC_hg19_v1_chr10_+_114135025 NM_203380	54051	+	BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AK000339|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##NM_203379|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##NM_203380|ACSL5|51703|acyl-CoA synthetase long-chain family member 5	0.0	
chr13	113900554	113900656	reg1029382.p1	3.780	+	TSC_hg19_v1_chr13_+_113863926 BC008308 NM_001008895 AB590820 AB178950 AY365124	-36671	+	TSC_hg19_v1_chr13_+_113863089 AL833355 NM_003589 AF077188	-37504	+	TSC_hg19_v1_chr13_-_113862984 CU677649 AK001302 BC031246 AK309321 AF183426 BC016614 AK023313 AK002167 AK289462 AK001185 AK000888 NM_001127202 NM_001127203 NM_018386	-37619	-	TSC_hg19_v1_chr13_+_113951509 NM_005561	50882	+	TSC_hg19_v1_chr13_+_113951553 AK092398 BC025335	50941	+	TSC_hg19_v1_chr13_+_113951612 BC093044 BC021288 AK301584 AB463850 DQ892614 DQ895854	51083	+	BC008308|CUL4A|8451|cullin 4A##NM_001008895|CUL4A|8451|cullin 4A##AB178950|CUL4A|8451|cullin 4A##AY365124|CUL4A|8451|cullin 4A##AL833355|CUL4A|8451|cullin 4A##NM_003589|CUL4A|8451|cullin 4A##AF077188|CUL4A|8451|cullin 4A##AK001302|PCID2|55795|PCI domain containing 2##BC031246|PCID2|55795|PCI domain containing 2##AK309321|PCID2|55795|PCI domain containing 2##AF183426|PCID2|55795|PCI domain containing 2##BC016614|PCID2|55795|PCI domain containing 2##AK023313|PCID2|55795|PCI domain containing 2##AK002167|PCID2|55795|PCI domain containing 2##AK289462|PCID2|55795|PCI domain containing 2##AK001185|PCID2|55795|PCI domain containing 2##AK000888|PCID2|55795|PCI domain containing 2##NM_001127202|PCID2|55795|PCI domain containing 2##NM_001127203|PCID2|55795|PCI domain containing 2##NM_018386|PCID2|55795|PCI domain containing 2##NM_005561|LAMP1|3916|lysosomal-associated membrane protein 1##AK092398|LAMP1|3916|lysosomal-associated membrane protein 1##BC025335|LAMP1|3916|lysosomal-associated membrane protein 1##BC093044|LAMP1|3916|lysosomal-associated membrane protein 1##BC021288|LAMP1|3916|lysosomal-associated membrane protein 1##AK301584|LAMP1|3916|lysosomal-associated membrane protein 1##DQ892614|LAMP1|3916|lysosomal-associated membrane protein 1##DQ895854|LAMP1|3916|lysosomal-associated membrane protein 1	0.051135	
chr15	72335349	72335449	reg1042982.p1	3.780	+	AF121129 NM_014249 NM_016346 AF148128	-232487	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	-495819	+	NM_024817 BC140868	-901589	+	AK097557 NM_001166340	71199	+	NM_001172109 NM_001172110	73819	+	BC140869 BC144683 TSC_hg19_v1_chr15_-_72410212 AF117888	74766	-	AF121129|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_014249|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##NM_016346|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AF148128|NR2E3|10002|nuclear receptor subfamily 2, group E, member 3##AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##AK097557|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001166340|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172109|SENP8|123228|SUMO/sentrin specific peptidase family member 8##NM_001172110|SENP8|123228|SUMO/sentrin specific peptidase family member 8##BC140869|MYO9A|4649|myosin IXA##BC144683|MYO9A|4649|myosin IXA##AF117888|MYO9A|4649|myosin IXA	0.0	
chr18	42053762	42053861	reg1041954.p1	3.780	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1196382	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-1358242	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-2518578	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	206303	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	207057	+	NM_001242692 AK292422	739141	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.0	
chr18	48678707	48678872	reg1034890.p1	3.780	+	TSC_hg19_v1_chr18_+_48556613 AK290770 BC002379	-122183	+	TSC_hg19_v1_chr18_+_48556582 NM_005359	-122255	+	TSC_hg19_v1_chr18_+_48494409 AK024822 AF308695 AK303027 AK310911 BC014624 AK223507 AB029151	-184368	+	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	44437	-	AY950679 TSC_hg19_v1_chr18_-_48723734	44923	-	TSC_hg19_v1_chr18_-_48724033 NM_016626	45251	-	AK290770|SMAD4|4089|SMAD family member 4##BC002379|SMAD4|4089|SMAD family member 4##NM_005359|SMAD4|4089|SMAD family member 4##AK024822|ELAC1|55520|elaC homolog 1 (E. coli)##AF308695|ELAC1|55520|elaC homolog 1 (E. coli)##AK310911|ELAC1|55520|elaC homolog 1 (E. coli)##BC014624|ELAC1|55520|elaC homolog 1 (E. coli)##AK223507|ELAC1|55520|elaC homolog 1 (E. coli)##AB029151|ELAC1|55520|elaC homolog 1 (E. coli)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)	0.730562	CTCF.p2:-29:0.731
chr3	194991578	194991674	reg1006764.p1	3.780	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-584123	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-585003	+	NM_018385	-598421	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	224	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	172076	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	278487	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.70279	CTCF.p2:6:0.691
chr4	91041322	91041427	reg1040679.p1	3.780	+	AK125557 AK313566 BC063848 NM_007351 U27109 AB385146 HQ258009	-225312	+	NM_001146055	-281928	-	NM_001146054 NM_007308 L08850 AK290169 BC013293 HQ830268 BC108275 TSC_hg19_v1_chr4_-_90758313 HQ830269 NM_000345 HQ830267	-283132	-	AK097436 NM_001145065 AK310825 AB051467 BC021681	7344	+	BC051694 NM_207491	114807	+	AB209318 NM_001510 AK308611	2184218	+	AK125557|MMRN1|22915|multimerin 1##AK313566|MMRN1|22915|multimerin 1##BC063848|MMRN1|22915|multimerin 1##NM_007351|MMRN1|22915|multimerin 1##U27109|MMRN1|22915|multimerin 1##HQ258009|MMRN1|22915|multimerin 1##NM_001146055|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_001146054|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_007308|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##L08850|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK290169|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC013293|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830268|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##BC108275|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830269|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##NM_000345|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##HQ830267|SNCA|6622|synuclein, alpha (non A4 component of amyloid precursor)##AK097436|FAM190A|401145|family with sequence similarity 190, member A##NM_001145065|FAM190A|401145|family with sequence similarity 190, member A##AK310825|FAM190A|401145|family with sequence similarity 190, member A##AB051467|FAM190A|401145|family with sequence similarity 190, member A##BC021681|FAM190A|401145|family with sequence similarity 190, member A##BC051694|FAM190A|401145|family with sequence similarity 190, member A##NM_207491|FAM190A|401145|family with sequence similarity 190, member A##AB209318|GRID2|2895|glutamate receptor, ionotropic, delta 2##NM_001510|GRID2|2895|glutamate receptor, ionotropic, delta 2##AK308611|GRID2|2895|glutamate receptor, ionotropic, delta 2	0.0	
chr6	134772815	134772929	reg1039489.p2	3.780	+	TSC_hg19_v1_chr6_+_134758857 AK055166	-14024	+	AK055077 NM_001143676	-133677	-	TSC_hg19_v1_chr6_-_134498984 FM205708 AK293383 NM_001143677	-273880	-	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	498360	-	CU674720 EU831981 EU832074 TSC_hg19_v1_chr6_-_135375948 BC040849 AJ420551 BC001465	603016	-	TSC_hg19_v1_chr6_-_135375958 AK024258 AK295545 AF161394 U87791 AJ459826 AJ459827 NM_001145158 NM_001145207 NM_006620	603122	-	AK055166|LOC154092|154092|uncharacterized LOC154092##AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205708|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK293383|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143677|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)##EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)##BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)##BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)##AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)##AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)##AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)##U87791|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)	0.629508	CTCF.p2:2:0.630
chr6	79787945	79788036	reg1031313.p1	3.780	+	BC021905 TSC_hg19_v1_chr6_-_79787918	-72	-	TSC_hg19_v1_chr6_-_79787888 BC137488 BC144670	-102	-	DQ924532 AJ303102 TSC_hg19_v1_chr6_-_79787823	-171	-	TSC_hg19_v1_chr6_-_79787972 AK057039 NM_017934	67	-	L40357 TSC_hg19_v1_chr6_-_79944391 AF401520 AF274949 BC009529	156368	-	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	156435	-	BC021905|PHIP|55023|pleckstrin homology domain interacting protein##BC137488|PHIP|55023|pleckstrin homology domain interacting protein##BC144670|PHIP|55023|pleckstrin homology domain interacting protein##DQ924532|PHIP|55023|pleckstrin homology domain interacting protein##AJ303102|PHIP|55023|pleckstrin homology domain interacting protein##AK057039|PHIP|55023|pleckstrin homology domain interacting protein##NM_017934|PHIP|55023|pleckstrin homology domain interacting protein##L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3##BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3##AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3	0.0	
chr6_mann_hap4	2688538	2688618	reg1030504.p1	3.780	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.830069	CTCF.p2:1:0.830
chr7	110953194	110953299	reg1046391.p1	3.780	+	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-222123	+	NM_001024607	-2428610	-	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-2742872	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	249238	-	TSC_hg19_v1_chr7_-_111428948 AK294820	475765	-	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	893019	-	NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK294820|DOCK4|9732|dedicator of cytokinesis 4##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4	0.865189	CTCF.p2:-1:0.865
chr11	128353493	128353658	reg1031919.p1	3.779	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1480270	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1482850	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1482915	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	38388	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	38559	-	BX640634 NM_001143820	103877	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.0	
chr12	122065170	122065334	reg1040256.p2	3.779	+	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	-609	+	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	-46338	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	-46993	-	BC057760 NM_173855	42307	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	85492	+	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	166322	-	BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B##AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)	0.141157	
chr12	123942646	123942776	reg1038143.p1	3.779	+	NM_022717 AK290127 TSC_hg19_v1_chr12_+_123942685 BC047678 BC020829 U44799 BC054034	-8	+	TSC_hg19_v1_chr12_-_123921232 AK056934 NM_145058	-21470	-	CU680478 DQ892579 DQ895796 TSC_hg19_v1_chr12_-_123921017 AB085763 BC013042	-21699	-	BC093671 BC111955 NM_180699	1674	+	BC089444 TSC_hg19_v1_chr12_-_124018263 NM_178314	75463	-	TSC_hg19_v1_chr12_-_124018501 AK096697	75786	-	NM_022717|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##AK290127|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC047678|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##U44799|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC054034|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##AK056934|RILPL2|196383|Rab interacting lysosomal protein-like 2##NM_145058|RILPL2|196383|Rab interacting lysosomal protein-like 2##DQ892579|RILPL2|196383|Rab interacting lysosomal protein-like 2##DQ895796|RILPL2|196383|Rab interacting lysosomal protein-like 2##AB085763|RILPL2|196383|Rab interacting lysosomal protein-like 2##BC013042|RILPL2|196383|Rab interacting lysosomal protein-like 2##BC093671|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC111955|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##NM_180699|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC089444|RILPL1|353116|Rab interacting lysosomal protein-like 1##NM_178314|RILPL1|353116|Rab interacting lysosomal protein-like 1##AK096697|RILPL1|353116|Rab interacting lysosomal protein-like 1	0.0	
chr1	236541536	236541636	reg1037220.p1	3.779	+	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	-96270	-	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	-96398	-	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	-235710	+	AK290862 AY028913 NM_145861 BC106873 BC106874 BC114557 BC114560 BC128082	16097	+	AK096339 NM_080738 AY028914 AK291930 BC006533 AY071862	17236	+	NM_201545 AK098613	139955	+	AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##AK290862|EDARADD|128178|EDAR-associated death domain##AY028913|EDARADD|128178|EDAR-associated death domain##NM_145861|EDARADD|128178|EDAR-associated death domain##BC114557|EDARADD|128178|EDAR-associated death domain##BC114560|EDARADD|128178|EDAR-associated death domain##BC128082|EDARADD|128178|EDAR-associated death domain##AK096339|EDARADD|128178|EDAR-associated death domain##NM_080738|EDARADD|128178|EDAR-associated death domain##AY028914|EDARADD|128178|EDAR-associated death domain##AK291930|EDARADD|128178|EDAR-associated death domain##BC006533|EDARADD|128178|EDAR-associated death domain##AY071862|EDARADD|128178|EDAR-associated death domain##NM_201545|LGALS8|3964|lectin, galactoside-binding, soluble, 8##AK098613|LGALS8|3964|lectin, galactoside-binding, soluble, 8	0.0	
chr1	2574080	2574261	reg1034958.p1	3.779	+	AK093058 AX747891 NM_033467 TSC_hg19_v1_chr1_-_2564497	-9705	-	TSC_hg19_v1_chr1_+_2518534 AK094901	-55656	+	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	-55982	+	NM_001242672	132059	-	NM_080431 AK058153 AK314500 BC029499	363885	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	411606	+	AK093058|MMEL1|79258|membrane metallo-endopeptidase-like 1##NM_033467|MMEL1|79258|membrane metallo-endopeptidase-like 1##AK094901|FAM213B|127281|family with sequence similarity 213, member B##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B##NM_001242672|TTC34|100287898|tetratricopeptide repeat domain 34##NM_080431|ACTRT2|140625|actin-related protein T2##AK058153|ACTRT2|140625|actin-related protein T2##AK314500|ACTRT2|140625|actin-related protein T2##BC029499|ACTRT2|140625|actin-related protein T2##NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16	0.019814	
chr16	89432187	89432321	reg1042987.p2	3.779	+	AK293862 NM_001242885	-44714	+	BC041585 TSC_hg19_v1_chr16_-_89351073	-81298	-	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	-82180	-	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	124677	-	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	142560	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	194811	+	AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC041585|ANKRD11|29123|ankyrin repeat domain 11##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13	0.0	
chr19	39965071	39965182	reg1006444.p2	3.779	+	TSC_hg19_v1_chr19_+_39936289 NM_003169 AF040253	-28823	+	TSC_hg19_v1_chr19_+_39936253 BC024203 AB209257	-28865	+	TSC_hg19_v1_chr19_+_39936247 U56402	-28881	+	NM_001001563 BC121146 BC121147	5961	+	TSC_hg19_v1_chr19_+_39971479 BC050082	6340	+	TSC_hg19_v1_chr19_+_39971488 AY551341	6364	+	NM_003169|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##AF040253|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##BC024203|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##AB209257|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##U56402|SUPT5H|6829|suppressor of Ty 5 homolog (S. cerevisiae)##NM_001001563|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##BC121146|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##BC121147|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##BC050082|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)##AY551341|TIMM50|92609|translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae)	0.069995	
chr22	38701801	38701917	reg1034740.p2	3.779	+	TSC_hg19_v1_chr22_-_38669012 BC015489 AB097053 AK309071 AK292652 NM_001195072 NM_012264	-32851	-	TSC_hg19_v1_chr22_-_38668943 CR749859	-32914	-	NM_001195071	-33190	-	BC006490 AB091043 TSC_hg19_v1_chr22_-_38713340 AK223498	11432	-	TSC_hg19_v1_chr22_-_38713439 NM_152221	11555	-	AB024597 NM_001894	12229	-	BC015489|TMEM184B|25829|transmembrane protein 184B##AB097053|TMEM184B|25829|transmembrane protein 184B##AK309071|TMEM184B|25829|transmembrane protein 184B##AK292652|TMEM184B|25829|transmembrane protein 184B##NM_001195072|TMEM184B|25829|transmembrane protein 184B##NM_012264|TMEM184B|25829|transmembrane protein 184B##CR749859|TMEM184B|25829|transmembrane protein 184B##NM_001195071|TMEM184B|25829|transmembrane protein 184B##BC006490|CSNK1E|1454|casein kinase 1, epsilon##AB091043|CSNK1E|1454|casein kinase 1, epsilon##AK223498|CSNK1E|1454|casein kinase 1, epsilon##NM_152221|CSNK1E|1454|casein kinase 1, epsilon##AB024597|CSNK1E|1454|casein kinase 1, epsilon##NM_001894|CSNK1E|1454|casein kinase 1, epsilon	0.010012	
chr22	42354105	42354275	reg1000608.p2	3.779	+	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	-11067	-	EU035297 NM_001110215	-17968	-	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	-31391	-	TSC_hg19_v1_chr22_+_42372810 NM_019106 NM_145733 AK290037 AK299919 AL833942 BC111779 CR456572 AF285107 AF285108 AF285109	18718	+	AK128138 NM_152613 TSC_hg19_v1_chr22_+_42394808 AK129656 AK296138 BC022546 BC022549 BC038789 AK310980 CR456400 AB463345 CU012958 CU013246	40585	+	AB528190 CU013127 CU013415 DQ891874 DQ895062 CR456527 M38083 BC000095 TSC_hg19_v1_chr22_-_42466570	112245	-	CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_019106|SEPT3|55964|septin 3##NM_145733|SEPT3|55964|septin 3##AK290037|SEPT3|55964|septin 3##AK299919|SEPT3|55964|septin 3##AL833942|SEPT3|55964|septin 3##BC111779|SEPT3|55964|septin 3##CR456572|SEPT3|55964|septin 3##AF285107|SEPT3|55964|septin 3##AF285108|SEPT3|55964|septin 3##AF285109|SEPT3|55964|septin 3##AK128138|WBP2NL|164684|WBP2 N-terminal like##NM_152613|WBP2NL|164684|WBP2 N-terminal like##AK129656|WBP2NL|164684|WBP2 N-terminal like##AK296138|WBP2NL|164684|WBP2 N-terminal like##BC022546|WBP2NL|164684|WBP2 N-terminal like##BC022549|WBP2NL|164684|WBP2 N-terminal like##CR456400|WBP2NL|164684|WBP2 N-terminal like##CU013127|NAGA|4668|N-acetylgalactosaminidase, alpha-##CU013415|NAGA|4668|N-acetylgalactosaminidase, alpha-##DQ891874|NAGA|4668|N-acetylgalactosaminidase, alpha-##DQ895062|NAGA|4668|N-acetylgalactosaminidase, alpha-##CR456527|NAGA|4668|N-acetylgalactosaminidase, alpha-##M38083|NAGA|4668|N-acetylgalactosaminidase, alpha-##BC000095|NAGA|4668|N-acetylgalactosaminidase, alpha-	0.581065	CTCF.p2:16:0.581
chr2	3740124	3740230	reg1038874.p1	3.779	+	AK302299 NM_018436 BC029652	-34380	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-97608	+	X74803 TSC_hg19_v1_chr2_+_3627765	-112432	+	U23752 AB028641 NM_003108 BC025789 AB464713	2092638	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	3265723	-	TSC_hg19_v1_chr2_-_7006650 AK308509	3266526	-	AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##X74803|RPS7|6201|ribosomal protein S7##U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	0.3394	CTCF.p2:-28:0.339
chr2	38374130	38374310	reg1037150.p2	3.779	+	TSC_hg19_v1_chr2_-_38303315 AK312686 NM_000104	-70900	-	U03688 BC012049 TSC_hg19_v1_chr2_-_38303294 AK297039 AK303862	-70938	-	NM_001170793 NM_144713 AK057516 AF435956	-196620	+	AK316179 TSC_hg19_v1_chr2_-_38525609	151349	-	TSC_hg19_v1_chr2_-_38604411 BC053508 AK026946 AK225190 AK303985 AK308894	230184	-	TSC_hg19_v1_chr2_-_38604430 NM_001135673 NM_022374	230211	-	AK312686|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_000104|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##U03688|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##BC012049|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK303862|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1##AK316179|ATL2|64225|atlastin GTPase 2##BC053508|ATL2|64225|atlastin GTPase 2##AK026946|ATL2|64225|atlastin GTPase 2##AK225190|ATL2|64225|atlastin GTPase 2##AK303985|ATL2|64225|atlastin GTPase 2##AK308894|ATL2|64225|atlastin GTPase 2##NM_001135673|ATL2|64225|atlastin GTPase 2##NM_022374|ATL2|64225|atlastin GTPase 2	0.0	
chr3	52040116	52040296	reg1034830.p1	3.779	+	BC008926 NM_000992 TSC_hg19_v1_chr3_-_52029968	-10243	-	TSC_hg19_v1_chr3_-_52029912 BC070190 AK289538 AK311884 D28412	-10293	-	TSC_hg19_v1_chr3_-_52029890 BC071663 U49083 U10248 Z49148 BC071909 BC070481	-10325	-	X93921 TSC_hg19_v1_chr3_-_52090192 BC019107 AF508727 BC104880 BC104882 NM_001947	50069	-	TSC_hg19_v1_chr3_-_52188413 BC119692 AK075289 BC119693 AK315688	148224	-	BC110877 NM_001161580 NM_001161581 NM_015426	148499	-	BC008926|RPL29|6159|ribosomal protein L29##NM_000992|RPL29|6159|ribosomal protein L29##BC070190|RPL29|6159|ribosomal protein L29##AK289538|RPL29|6159|ribosomal protein L29##AK311884|RPL29|6159|ribosomal protein L29##D28412|RPL29|6159|ribosomal protein L29##BC071663|RPL29|6159|ribosomal protein L29##U49083|RPL29|6159|ribosomal protein L29##U10248|RPL29|6159|ribosomal protein L29##Z49148|RPL29|6159|ribosomal protein L29##BC071909|RPL29|6159|ribosomal protein L29##BC070481|RPL29|6159|ribosomal protein L29##X93921|DUSP7|1849|dual specificity phosphatase 7##BC019107|DUSP7|1849|dual specificity phosphatase 7##AF508727|DUSP7|1849|dual specificity phosphatase 7##BC104880|DUSP7|1849|dual specificity phosphatase 7##BC104882|DUSP7|1849|dual specificity phosphatase 7##NM_001947|DUSP7|1849|dual specificity phosphatase 7##BC119692|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK075289|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC119693|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK315688|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC110877|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161580|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161581|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_015426|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)	0.0	
chr7	54732639	54732742	reg1012146.p2	3.779	+	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	-122608	+	NM_182595	-1629342	+	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	-3348204	-	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	94189	-	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	94231	-	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	354055	+	NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12##BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit##AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor	0.011378	
chr7	99765255	99765401	reg1027829.p2	3.779	+	TSC_hg19_v1_chr7_-_99756347 AK054872	-8980	-	TSC_hg19_v1_chr7_-_99756309 BC015722 NM_018275 BC094727 AK310170	-9029	-	TSC_hg19_v1_chr7_+_99746538 NM_001008395 BC105609 BC063401 BC130553 BC130559	-18773	+	BC012976 TSC_hg19_v1_chr7_-_99766194 AF316113	875	-	TSC_hg19_v1_chr7_-_99766239 NM_024637	977	-	AB587513 AM392909 CU693354 DQ893325 DQ896641 AL834418 TSC_hg19_v1_chr7_-_99774981 AB209144 AK096281 BC027972 NM_152742 AY093588	9599	-	AK054872|C7orf43|55262|chromosome 7 open reading frame 43##BC015722|C7orf43|55262|chromosome 7 open reading frame 43##NM_018275|C7orf43|55262|chromosome 7 open reading frame 43##BC094727|C7orf43|55262|chromosome 7 open reading frame 43##AK310170|C7orf43|55262|chromosome 7 open reading frame 43##NM_001008395|C7orf59|389541|chromosome 7 open reading frame 59##BC105609|C7orf59|389541|chromosome 7 open reading frame 59##BC063401|C7orf59|389541|chromosome 7 open reading frame 59##BC130553|C7orf59|389541|chromosome 7 open reading frame 59##BC130559|C7orf59|389541|chromosome 7 open reading frame 59##BC012976|GAL3ST4|79690|galactose-3-O-sulfotransferase 4##AF316113|GAL3ST4|79690|galactose-3-O-sulfotransferase 4##NM_024637|GAL3ST4|79690|galactose-3-O-sulfotransferase 4##AM392909|GPC2|221914|glypican 2##DQ893325|GPC2|221914|glypican 2##DQ896641|GPC2|221914|glypican 2##AL834418|GPC2|221914|glypican 2##AK096281|GPC2|221914|glypican 2##BC027972|GPC2|221914|glypican 2##NM_152742|GPC2|221914|glypican 2##AY093588|GPC2|221914|glypican 2	0.0	
chr1	172328055	172328236	reg1022321.p2	3.778	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-517442	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-577307	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-577331	+	AL035295 NM_139240 BC038410	61683	+	TSC_hg19_v1_chr1_-_172413202 BC006539	85043	-	TSC_hg19_v1_chr1_-_172413207 AK308201	85062	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.0	
chr1	199521103	199521215	reg1008777.p1	3.778	+	TSC_hg19_v1_chr1_-_198906559 EF413001	-614612	-	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-912829	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-912934	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	475710	+	AK316513 TSC_hg19_v1_chr1_+_200011716	490565	+	NM_001105517	661496	+	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene	0.0	
chr17	7461524	7461625	reg1040668.p1	3.778	+	BC019047 NM_003809 NM_172089 BC071837 AF055872 AY358870 AY081051 BC104420 AF030099	-9161	+	TSC_hg19_v1_chr17_+_7388113 CU688278	-73458	+	TSC_hg19_v1_chr17_+_7387773 BC137231 BC067295	-73719	+	TSC_hg19_v1_chr17_+_7461620 NM_001198622 NM_001198623 NM_001198624 NM_003808 NM_172087 NM_172088	42	+	AK225556 AK314518 AK301221 AF046888 AF114011 AY081050 AF114013 AF114012 AF184972 AY358880 BC008042 TSC_hg19_v1_chr17_+_7462318 DQ149579 EF211088 EU831984 EU832077 AF136294 BT019561 BT019562 CR542040 CR542073	636	+	TSC_hg19_v1_chr17_+_7465295 NM_015670	3722	+	BC019047|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_003809|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##NM_172089|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough##BC071837|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AF055872|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AY358870|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AY081051|TNFSF12-TNFSF13|407977|TNFSF12-TNFSF13 readthrough##BC104420|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##AF030099|TNFSF12|8742|tumor necrosis factor (ligand) superfamily, member 12##BC137231|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##BC067295|POLR2A|5430|polymerase (RNA) II (DNA directed) polypeptide A, 220kDa##NM_001198622|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198623|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_001198624|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_003808|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_172087|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_172088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK225556|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK314518|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AK301221|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF046888|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114011|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AY081050|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114013|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF114012|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF184972|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AY358880|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BC008042|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##DQ149579|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EF211088|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EU831984|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##EU832077|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##AF136294|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BT019561|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##BT019562|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##CR542040|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##CR542073|TNFSF13|8741|tumor necrosis factor (ligand) superfamily, member 13##NM_015670|SENP3|26168|SUMO1/sentrin/SMT3 specific peptidase 3	0.012262	
chr17	8828047	8828227	reg1037170.p1	3.778	+	AY725853 AF128881 NM_014308	-12321	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-57153	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-125585	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	40844	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	96830	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	650994	-	AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8	0.0	
chr2	238064008	238064153	reg1022976.p1	3.778	+	TSC_hg19_v1_chr2_+_237994551 AK289891 BC067774 AK308962 U51205 BC003090 BC080617 CR456994 CU678366	-69503	+	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	-69560	+	TSC_hg19_v1_chr2_-_237994424 AK056246	-69643	-	TSC_hg19_v1_chr2_-_238322786 AK092021 AX747317 AK304870 BC144595 BC150625 BC171790	258705	-	AK308451 TSC_hg19_v1_chr2_-_238322808 BX647500	258729	-	AK303290 TSC_hg19_v1_chr2_-_238322814	258734	-	AK289891|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK308962|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##U51205|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC003090|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##BC080617|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##CR456994|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK092021|COL6A3|1293|collagen, type VI, alpha 3##AK304870|COL6A3|1293|collagen, type VI, alpha 3##BC144595|COL6A3|1293|collagen, type VI, alpha 3##BC150625|COL6A3|1293|collagen, type VI, alpha 3##BC171790|COL6A3|1293|collagen, type VI, alpha 3##AK308451|COL6A3|1293|collagen, type VI, alpha 3##BX647500|COL6A3|1293|collagen, type VI, alpha 3##AK303290|COL6A3|1293|collagen, type VI, alpha 3	0.0	
chr4	79559944	79560096	reg1038174.p1	3.778	+	TSC_hg19_v1_chr4_+_79472911 BC000871 AK313945	-87112	+	NM_005139 TSC_hg19_v1_chr4_+_79472790	-87250	+	BC006366 TSC_hg19_v1_chr4_-_79103287	-456735	-	TSC_hg19_v1_chr4_+_79697501 AL137661	137463	+	NM_017593 NM_198892 TSC_hg19_v1_chr4_+_79697532	137516	+	TSC_hg19_v1_chr4_+_79697552 AK292147 BC036021 DQ890994	137603	+	BC000871|ANXA3|306|annexin A3##AK313945|ANXA3|306|annexin A3##NM_005139|ANXA3|306|annexin A3##AL137661|BMP2K|55589|BMP2 inducible kinase##NM_017593|BMP2K|55589|BMP2 inducible kinase##NM_198892|BMP2K|55589|BMP2 inducible kinase##AK292147|BMP2K|55589|BMP2 inducible kinase##BC036021|BMP2K|55589|BMP2 inducible kinase##DQ890994|BMP2K|55589|BMP2 inducible kinase	0.010993	
chr7	141674781	141674873	reg1040807.p1	3.778	+	BC104933 BC104937 NM_176817	-1255	-	AF139768 BC113098 BC113099 AK295200 TSC_hg19_v1_chr7_-_141646760 AK313703 AK292766 AJ271684 NM_013252 AK307095	-28066	-	BC136819 BC136821 NM_001001656	-56182	+	AF016833 NM_004668 BC120872	20865	+	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	136712	+	AY358487 BC035384 AK122940 NM_001001317	283034	-	BC104933|TAS2R38|5726|taste receptor, type 2, member 38##BC104937|TAS2R38|5726|taste receptor, type 2, member 38##NM_176817|TAS2R38|5726|taste receptor, type 2, member 38##AF139768|CLEC5A|23601|C-type lectin domain family 5, member A##BC113098|CLEC5A|23601|C-type lectin domain family 5, member A##BC113099|CLEC5A|23601|C-type lectin domain family 5, member A##AK295200|CLEC5A|23601|C-type lectin domain family 5, member A##AK313703|CLEC5A|23601|C-type lectin domain family 5, member A##AK292766|CLEC5A|23601|C-type lectin domain family 5, member A##AJ271684|CLEC5A|23601|C-type lectin domain family 5, member A##NM_013252|CLEC5A|23601|C-type lectin domain family 5, member A##AK307095|CLEC5A|23601|C-type lectin domain family 5, member A##BC136819|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4##BC136821|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4##NM_001001656|OR9A4|130075|olfactory receptor, family 9, subfamily A, member 4##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58	0.820908	CTCF.p2:7:0.821
chr7	94987095	94987180	reg1031265.p1	3.778	+	TSC_hg19_v1_chr7_-_94953845 D84371 U53784 Z70723 NM_000446	-33282	-	M63013 AB528644 M63012 S64615 TSC_hg19_v1_chr7_-_94953802 AK314027 BC074719	-33363	-	NM_001166161 NM_001166162 NM_001166163	-447928	+	L48516 AF320003 AF329433 CU687094 TSC_hg19_v1_chr7_-_95025687 AK301772 BC070374 AK304282 NM_000940	38519	-	TSC_hg19_v1_chr7_-_95064341 AB102891 CU692318 AB591009 L48513 BC040010 AF001602 AF001601 BC073739 AK296029 BC093006 BC046160 AK291103 AK308065 AK315209 AK296636 BC009728 NM_000305 NM_001018161 AK301313	77224	-	BC113479 BC113481 NM_016116 NM_145872 AB463411 AF156779 HQ258383 BC025024	128156	+	D84371|PON1|5444|paraoxonase 1##U53784|PON1|5444|paraoxonase 1##Z70723|PON1|5444|paraoxonase 1##NM_000446|PON1|5444|paraoxonase 1##M63013|PON1|5444|paraoxonase 1##M63012|PON1|5444|paraoxonase 1##S64615|PON1|5444|paraoxonase 1##AK314027|PON1|5444|paraoxonase 1##BC074719|PON1|5444|paraoxonase 1##NM_001166161|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166162|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##NM_001166163|PPP1R9A|55607|protein phosphatase 1, regulatory subunit 9A##L48516|PON3|5446|paraoxonase 3##AF320003|PON3|5446|paraoxonase 3##AF329433|PON3|5446|paraoxonase 3##BC070374|PON3|5446|paraoxonase 3##AK304282|PON3|5446|paraoxonase 3##NM_000940|PON3|5446|paraoxonase 3##AB102891|PON2|5445|paraoxonase 2##L48513|PON2|5445|paraoxonase 2##BC040010|PON2|5445|paraoxonase 2##AF001602|PON2|5445|paraoxonase 2##AF001601|PON2|5445|paraoxonase 2##AK296029|PON2|5445|paraoxonase 2##BC093006|PON2|5445|paraoxonase 2##BC046160|PON2|5445|paraoxonase 2##AK291103|PON2|5445|paraoxonase 2##AK308065|PON2|5445|paraoxonase 2##AK315209|PON2|5445|paraoxonase 2##AK296636|PON2|5445|paraoxonase 2##BC009728|PON2|5445|paraoxonase 2##NM_000305|PON2|5445|paraoxonase 2##NM_001018161|PON2|5445|paraoxonase 2##AK301313|PON2|5445|paraoxonase 2##BC113479|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC113481|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_016116|ASB4|51666|ankyrin repeat and SOCS box containing 4##NM_145872|ASB4|51666|ankyrin repeat and SOCS box containing 4##AF156779|ASB4|51666|ankyrin repeat and SOCS box containing 4##HQ258383|ASB4|51666|ankyrin repeat and SOCS box containing 4##BC025024|ASB4|51666|ankyrin repeat and SOCS box containing 4	0.032393	
chrX	46421890	46422056	reg1033087.p2	3.778	+	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	-17029	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	-17117	-	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	-115262	+	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	11305	+	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	196556	-	TSC_hg19_v1_chrX_-_46618608 BC094742	196657	-	BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##BC094742|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7	0.0	
chr11	102419453	102419633	reg1034076.p1	3.777	+	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	-18084	-	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	-95930	-	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-201515	+	AB527354 NM_004771 Y12779	76512	-	AB527320 AF195192 AY358752 NM_022122	156912	-	BC074988 BC074989 BC144094 J05556 AK292659 AK303388 AK303511 AK313374 NM_002424	176110	-	DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20##AF195192|MMP27|64066|matrix metallopeptidase 27##AY358752|MMP27|64066|matrix metallopeptidase 27##NM_022122|MMP27|64066|matrix metallopeptidase 27##BC074988|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC074989|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##BC144094|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##J05556|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK292659|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303388|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK303511|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##AK313374|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)##NM_002424|MMP8|4317|matrix metallopeptidase 8 (neutrophil collagenase)	0.0	
chr11	67465867	67465986	reg1036659.p1	3.777	+	TSC_hg19_v1_chr11_-_67450557 AB055770	-15380	-	BC007685 NM_001031615	-17242	-	TSC_hg19_v1_chr11_-_67442086 AK309277 NM_000695 AK092464	-23795	-	TSC_hg19_v1_chr11_-_67572800 BC063712 BC110365	106826	-	TSC_hg19_v1_chr11_-_67771527 BC101568 BC105104 BC025669 AJ422142 AJ271326 BC092472 BC033623 NM_030930	305641	-	TSC_hg19_v1_chr11_+_67776039 EF411198 NM_001161473	310105	+	AB055770|RPL37|6167|ribosomal protein L37##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC063712|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC110365|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC101568|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC105104|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC025669|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ422142|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ271326|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC092472|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC033623|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##NM_030930|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##EF411198|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001161473|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1	0.931389	CTCF.p2:78:0.853
chr1	224645238	224645326	reg1010002.p1	3.777	+	AB209887 NM_001115113 NM_025160	-23282	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-23522	-	BC000573 TSC_hg19_v1_chr1_+_224544609 AK222634 BX649076 AM392966 AM393151 AM393502 DQ891901 DQ895087	-100671	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	158897	+	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	472083	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	970447	-	AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##BC000573|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK222634|CNIH4|29097|cornichon homolog 4 (Drosophila)##BX649076|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM392966|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM393151|CNIH4|29097|cornichon homolog 4 (Drosophila)##AM393502|CNIH4|29097|cornichon homolog 4 (Drosophila)##DQ891901|CNIH4|29097|cornichon homolog 4 (Drosophila)##DQ895087|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor	0.0	
chr17	62198550	62198730	reg1030377.p2	3.777	+	TSC_hg19_v1_chr17_-_62097985 AK295382 AK309953 NM_001099786 NM_001099787 NM_001099788 NM_001099789	-100658	-	NM_000873 TSC_hg19_v1_chr17_-_62084314	-114335	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	-122878	+	TSC_hg19_v1_chr17_-_62207401 AB385116 BC130405 BC130407	8758	-	AF059198 AB209869 TSC_hg19_v1_chr17_-_62207502 NM_001433 AK292403	8876	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	141946	-	AK295382|ICAM2|3384|intercellular adhesion molecule 2##NM_001099786|ICAM2|3384|intercellular adhesion molecule 2##NM_001099787|ICAM2|3384|intercellular adhesion molecule 2##NM_001099788|ICAM2|3384|intercellular adhesion molecule 2##NM_001099789|ICAM2|3384|intercellular adhesion molecule 2##NM_000873|ICAM2|3384|intercellular adhesion molecule 2##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##BC130405|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130407|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AF059198|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AB209869|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##NM_001433|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK292403|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2	0.0	
chr17	63630933	63631016	reg1037066.p1	3.777	+	CR933657 TSC_hg19_v1_chr17_-_63557767	-73206	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	-73295	-	BC006295 TSC_hg19_v1_chr17_-_63556453	-74499	-	BC029524 NM_001037325	191686	-	BC131805 TSC_hg19_v1_chr17_-_64188195 BC037991 NM_145036 AK299075 AK096929 NM_001199165	557207	-	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	594551	-	CR933657|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##BC006295|AXIN2|8313|axin 2##BC029524|CEP112|201134|centrosomal protein 112kDa##NM_001037325|CEP112|201134|centrosomal protein 112kDa##BC131805|CEP112|201134|centrosomal protein 112kDa##BC037991|CEP112|201134|centrosomal protein 112kDa##NM_145036|CEP112|201134|centrosomal protein 112kDa##AK299075|CEP112|201134|centrosomal protein 112kDa##AK096929|CEP112|201134|centrosomal protein 112kDa##NM_001199165|CEP112|201134|centrosomal protein 112kDa##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	0.0	
chr19	2087135	2087288	reg1029228.p1	3.777	+	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	-1968	-	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-35978	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-40970	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	9054	-	TSC_hg19_v1_chr19_-_2096297 AL832474	9083	-	TSC_hg19_v1_chr19_+_2096913 AY358444 NM_001031735 NM_001039846 DQ196309 DQ196310 AK301957 AY753639 BC014609 BC040964 BC010443	9649	+	AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A##AY358444|IZUMO4|113177|IZUMO family member 4##NM_001031735|IZUMO4|113177|IZUMO family member 4##NM_001039846|IZUMO4|113177|IZUMO family member 4##DQ196309|IZUMO4|113177|IZUMO family member 4##DQ196310|IZUMO4|113177|IZUMO family member 4##AK301957|IZUMO4|113177|IZUMO family member 4##AY753639|IZUMO4|113177|IZUMO family member 4##BC014609|IZUMO4|113177|IZUMO family member 4##BC040964|IZUMO4|113177|IZUMO family member 4##BC010443|IZUMO4|113177|IZUMO family member 4	0.0	
chr22	35763677	35763787	reg1029063.p1	3.777	+	TSC_hg19_v1_chr22_+_35695886 AK097066 AK297827 AK295918 AK296670 AK314522 AK097926 CR456595 BC005144 BC040006 BC046151 AB463301 CU013195 CU013483 CU692314	-67836	+	TSC_hg19_v1_chr22_+_35695855 NM_001135730 NM_001135732 NM_005488 AK026576 AJ006973 AY358980	-67901	+	AK293694 NM_001135729	-68465	+	CR456505 NM_002133 TSC_hg19_v1_chr22_+_35777085 X06985	13336	+	TSC_hg19_v1_chr22_+_35777088 AK313120 BC001491 M23041 AB528477 BT019785 CR541945 CR541968 CU013103 CU013391 DQ892310 DQ895510 JF323038	13394	+	AF051791 TSC_hg19_v1_chr22_+_35779219	15430	+	AK097066|TOM1|10043|target of myb1 (chicken)##AK297827|TOM1|10043|target of myb1 (chicken)##AK295918|TOM1|10043|target of myb1 (chicken)##AK296670|TOM1|10043|target of myb1 (chicken)##AK314522|TOM1|10043|target of myb1 (chicken)##AK097926|TOM1|10043|target of myb1 (chicken)##CR456595|TOM1|10043|target of myb1 (chicken)##BC040006|TOM1|10043|target of myb1 (chicken)##BC046151|TOM1|10043|target of myb1 (chicken)##CU013195|TOM1|10043|target of myb1 (chicken)##CU013483|TOM1|10043|target of myb1 (chicken)##NM_001135730|TOM1|10043|target of myb1 (chicken)##NM_001135732|TOM1|10043|target of myb1 (chicken)##NM_005488|TOM1|10043|target of myb1 (chicken)##AK026576|TOM1|10043|target of myb1 (chicken)##AJ006973|TOM1|10043|target of myb1 (chicken)##AY358980|TOM1|10043|target of myb1 (chicken)##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)##CR456505|HMOX1|3162|heme oxygenase (decycling) 1##NM_002133|HMOX1|3162|heme oxygenase (decycling) 1##X06985|HMOX1|3162|heme oxygenase (decycling) 1##AK313120|HMOX1|3162|heme oxygenase (decycling) 1##BC001491|HMOX1|3162|heme oxygenase (decycling) 1##M23041|HMOX1|3162|heme oxygenase (decycling) 1##BT019785|HMOX1|3162|heme oxygenase (decycling) 1##CR541945|HMOX1|3162|heme oxygenase (decycling) 1##CR541968|HMOX1|3162|heme oxygenase (decycling) 1##CU013103|HMOX1|3162|heme oxygenase (decycling) 1##CU013391|HMOX1|3162|heme oxygenase (decycling) 1##DQ892310|HMOX1|3162|heme oxygenase (decycling) 1##DQ895510|HMOX1|3162|heme oxygenase (decycling) 1##JF323038|HMOX1|3162|heme oxygenase (decycling) 1##AF051791|HMOX1|3162|heme oxygenase (decycling) 1	0.068427	
chr3	192616642	192616802	reg1035783.p1	3.777	+	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	-171357	-	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-489879	-	AY858112 NM_001083308	-1437771	+	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	18914	-	BC036194 BC045582 NM_178496	19219	-	TSC_hg19_v1_chr3_+_192958897 BC048095 NM_020386	342182	+	AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2##BC048095|HRASLS|57110|HRAS-like suppressor##NM_020386|HRASLS|57110|HRAS-like suppressor	0.0	
chr4	155176292	155176403	reg1032957.p1	3.777	+	BC008666 AK075372 AK093922 TSC_hg19_v1_chr4_-_154710236 AF311912 NM_003013	-466123	-	BC034385 NM_173662	-494961	-	TSC_hg19_v1_chr4_-_154681150 AK091509 AX747029	-495191	-	AY354497 NM_017639	136101	-	TSC_hg19_v1_chr4_-_155412411 AY354498 BC140919	236135	-	AK127704 NM_001142552 NM_001142553 TSC_hg19_v1_chr4_-_155412931	236560	-	BC008666|SFRP2|6423|secreted frizzled-related protein 2##AK075372|SFRP2|6423|secreted frizzled-related protein 2##AK093922|SFRP2|6423|secreted frizzled-related protein 2##AF311912|SFRP2|6423|secreted frizzled-related protein 2##NM_003013|SFRP2|6423|secreted frizzled-related protein 2##BC034385|RNF175|285533|ring finger protein 175##NM_173662|RNF175|285533|ring finger protein 175##AK091509|RNF175|285533|ring finger protein 175##AY354497|DCHS2|54798|dachsous 2 (Drosophila)##NM_017639|DCHS2|54798|dachsous 2 (Drosophila)##AY354498|DCHS2|54798|dachsous 2 (Drosophila)##BC140919|DCHS2|54798|dachsous 2 (Drosophila)##AK127704|DCHS2|54798|dachsous 2 (Drosophila)##NM_001142552|DCHS2|54798|dachsous 2 (Drosophila)##NM_001142553|DCHS2|54798|dachsous 2 (Drosophila)	0.356472	CTCF.p2:-8:0.356
chr4	25236530	25236675	reg1032224.p1	3.777	+	TSC_hg19_v1_chr4_+_25235654 BC051749 NM_018323 AK128622 AK001967 AY091514 AY065990 AF411320	-884	+	AK296302 AK095450 TSC_hg19_v1_chr4_+_25162325	-74297	+	AF146396 AJ277541 BC117202 BC126213 TSC_hg19_v1_chr4_-_25162072 AJ238617 EU832146 EU832239 BC023539 BX648976 BC012188 AK292476 NM_016955	-74547	-	TSC_hg19_v1_chr4_+_25314405 NM_024936 BC157834 BC171821 AK299211 AK309675 AY629351 BC016914 AF161537 CU677765	77845	+	TSC_hg19_v1_chr4_+_25378862 NM_013367 BC059383	142243	+	TSC_hg19_v1_chr4_+_25378893 AK292336 AF191338	142360	+	BC051749|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##NM_018323|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK128622|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK001967|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AY091514|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AY065990|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AF411320|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK296302|PI4K2B|55300|phosphatidylinositol 4-kinase type 2 beta##AK095450|LOC285540|285540|uncharacterized LOC285540##AF146396|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ277541|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC117202|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC126213|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ238617|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832146|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832239|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC023539|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BX648976|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC012188|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AK292476|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##NM_016955|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4##NM_013367|ANAPC4|29945|anaphase promoting complex subunit 4##BC059383|ANAPC4|29945|anaphase promoting complex subunit 4##AK292336|ANAPC4|29945|anaphase promoting complex subunit 4##AF191338|ANAPC4|29945|anaphase promoting complex subunit 4	0.0	
chr5	82372913	82373094	reg1030979.p1	3.777	+	BC093982 BC112191 NM_001017971	-771838	+	TSC_hg19_v1_chr5_-_81574219 NM_001025	-798784	-	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	-798832	-	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	194	-	TSC_hg19_v1_chr5_-_82373255 NM_174909	259	-	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	380	+	BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001025|RPS23|6228|ribosomal protein S23##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##NM_174909|TMEM167A|153339|transmembrane protein 167A##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4	0.0	
chr7	105401168	105401348	reg1001928.p3	3.777	+	AK300338 NM_138495	-81650	-	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	-179323	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	-228612	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	115727	-	TSC_hg19_v1_chr7_+_105517250 AK125261	116006	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	202440	+	AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1##BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##AK125261|CDHR3|222256|cadherin-related family member 3##NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3	0.0	
chr8	37761142	37761317	reg1030297.p2	3.777	+	AY280968 DQ083995 AF368294 DQ236342 BC077720 BC054881 TSC_hg19_v1_chr8_-_37757016 AK291781 AK026275 NM_001002814 NM_025151	-4228	-	TSC_hg19_v1_chr8_-_37727937 AK026177	-33279	-	NM_018310 TSC_hg19_v1_chr8_-_37707430 AK294337	-53785	-	BC029504 NM_152413	36417	-	S53291 TSC_hg19_v1_chr8_-_37822825	61590	-	AY487247 FJ170286 FJ170287 BC075017 AK313857 X70811 AK309919 AK293033 NM_000025	62855	-	AY280968|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ083995|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AF368294|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##DQ236342|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC077720|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##BC054881|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK291781|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK026275|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_001002814|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_025151|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##AK026177|RAB11FIP1|80223|RAB11 family interacting protein 1 (class I)##NM_018310|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##AK294337|BRF2|55290|BRF2, subunit of RNA polymerase III transcription initiation factor, BRF1-like##BC029504|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##NM_152413|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##S53291|ADRB3|155|adrenergic, beta-3-, receptor##AY487247|ADRB3|155|adrenergic, beta-3-, receptor##FJ170286|ADRB3|155|adrenergic, beta-3-, receptor##FJ170287|ADRB3|155|adrenergic, beta-3-, receptor##BC075017|ADRB3|155|adrenergic, beta-3-, receptor##AK313857|ADRB3|155|adrenergic, beta-3-, receptor##X70811|ADRB3|155|adrenergic, beta-3-, receptor##AK309919|ADRB3|155|adrenergic, beta-3-, receptor##AK293033|ADRB3|155|adrenergic, beta-3-, receptor##NM_000025|ADRB3|155|adrenergic, beta-3-, receptor	0.019715	
chr9	127016468	127016649	reg1024352.p1	3.777	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-242487	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-242675	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-324247	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	3452	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	3687	+	TSC_hg19_v1_chr9_+_127020255 AB026289	3706	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr9	132754414	132754567	reg1030610.p1	3.777	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-156725	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-156768	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-156806	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	50864	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	50998	-	BC039728 NM_001136557 NM_001136558 NM_020960	61494	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr11	131984237	131984333	reg1034485.p1	3.776	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-202946	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-203661	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-743816	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	828729	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	829320	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	1418029	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.962433	CTCF.p2:-5:0.962
chr11	69025809	69025989	reg1024340.p2	3.776	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-168373	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-209473	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-209549	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	35723	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	429957	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	430011	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.0	
chr1	211649532	211649621	reg1003710.p1	3.776	+	TSC_hg19_v1_chr1_+_211556168 BC005997	-93408	+	TSC_hg19_v1_chr1_+_211556144 AK130858	-93429	+	BC029600 NM_145759	-129871	+	AY191519 NM_001164688 NM_183059	16682	-	AF364518 TSC_hg19_v1_chr1_-_211751805	102186	-	AB451467 TSC_hg19_v1_chr1_-_211752048	102424	-	BC005997|LINC00467|84791|long intergenic non-protein coding RNA 467##AK130858|LINC00467|84791|long intergenic non-protein coding RNA 467##BC029600|TRAF5|7188|TNF receptor-associated factor 5##NM_145759|TRAF5|7188|TNF receptor-associated factor 5##AY191519|RD3|343035|retinal degeneration 3##NM_001164688|RD3|343035|retinal degeneration 3##NM_183059|RD3|343035|retinal degeneration 3##AF364518|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1	0.0	
chr14	23340715	23340839	reg1033638.p2	3.776	+	Z48481 TSC_hg19_v1_chr14_+_23305913 D26512 X90925 AB385035 CU687944 U41078	-34808	+	X83535 TSC_hg19_v1_chr14_+_23305909	-34868	+	TSC_hg19_v1_chr14_+_23305816 BC039581	-34941	+	TSC_hg19_v1_chr14_+_23340981 NM_014045 AY358399 BX161500	244	+	TSC_hg19_v1_chr14_+_23341364 AL834518 AK291030 BC113714 BC113716	645	+	AK299238 AK096283 NM_173527 BC035663	11658	+	Z48481|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##D26512|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##X90925|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##U41078|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##X83535|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##NM_014045|LRP10|26020|low density lipoprotein receptor-related protein 10##AY358399|LRP10|26020|low density lipoprotein receptor-related protein 10##BX161500|LRP10|26020|low density lipoprotein receptor-related protein 10##AL834518|LRP10|26020|low density lipoprotein receptor-related protein 10##AK291030|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113714|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113716|LRP10|26020|low density lipoprotein receptor-related protein 10##AK299238|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##AK096283|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##NM_173527|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##BC035663|REM2|161253|RAS (RAD and GEM)-like GTP binding 2	0.0	
chr16	30569731	30569866	reg1033241.p2	3.776	+	EU446557 BC008821 AK093992 AX748400 NM_001172679 NM_033410 TSC_hg19_v1_chr16_-_30569709	-190	-	TSC_hg19_v1_chr16_-_30546234 AB209546 AK299308 AK054567 BC001361 NM_023931 AK316254	-23608	-	TSC_hg19_v1_chr16_-_30546003 AK292192	-23798	-	EU446577 TSC_hg19_v1_chr16_-_30583034 BC018997	13224	-	NM_001024683 NM_145271	13929	-	TSC_hg19_v1_chr16_-_30597103 AK309511 EU446576 AK292465 BC040642 AK298848 AK056692 NM_152458	27177	-	EU446557|ZNF764|92595|zinc finger protein 764##BC008821|ZNF764|92595|zinc finger protein 764##AK093992|ZNF764|92595|zinc finger protein 764##NM_001172679|ZNF764|92595|zinc finger protein 764##NM_033410|ZNF764|92595|zinc finger protein 764##AB209546|ZNF747|65988|zinc finger protein 747##AK054567|ZNF747|65988|zinc finger protein 747##BC001361|ZNF747|65988|zinc finger protein 747##NM_023931|ZNF747|65988|zinc finger protein 747##AK292192|ZNF747|65988|zinc finger protein 747##EU446577|ZNF688|146542|zinc finger protein 688##BC018997|ZNF688|146542|zinc finger protein 688##NM_001024683|ZNF688|146542|zinc finger protein 688##NM_145271|ZNF688|146542|zinc finger protein 688##AK309511|ZNF785|146540|zinc finger protein 785##EU446576|ZNF785|146540|zinc finger protein 785##AK292465|ZNF785|146540|zinc finger protein 785##BC040642|ZNF785|146540|zinc finger protein 785##AK298848|ZNF785|146540|zinc finger protein 785##AK056692|ZNF785|146540|zinc finger protein 785##NM_152458|ZNF785|146540|zinc finger protein 785	0.0	
chr19	14696133	14696250	reg1031692.p1	3.776	+	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	-2277	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	-13342	-	TSC_hg19_v1_chr19_+_14640435 AK001416 AK315412 BC007801 BC013881 BC005952 AF038958 BC002425 BC034484 AF222742 AX771269 AF038959 AB529027 DQ891949 DQ895135 EU832830 GQ129437	-55732	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	89486	-	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	104573	+	BC082991 AF114491 AK301458 AK222891 AK298700 TSC_hg19_v1_chr19_-_14887654	191447	-	NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AK001416|TECR|9524|trans-2,3-enoyl-CoA reductase##AK315412|TECR|9524|trans-2,3-enoyl-CoA reductase##BC007801|TECR|9524|trans-2,3-enoyl-CoA reductase##BC013881|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005952|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038958|TECR|9524|trans-2,3-enoyl-CoA reductase##BC002425|TECR|9524|trans-2,3-enoyl-CoA reductase##BC034484|TECR|9524|trans-2,3-enoyl-CoA reductase##AF222742|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038959|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ891949|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ895135|TECR|9524|trans-2,3-enoyl-CoA reductase##EU832830|TECR|9524|trans-2,3-enoyl-CoA reductase##GQ129437|TECR|9524|trans-2,3-enoyl-CoA reductase##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333##BC082991|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AF114491|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK301458|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK222891|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK298700|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2	0.0	
chr21	34499558	34499695	reg1003420.p1	3.776	+	TSC_hg19_v1_chr21_+_34444006 BC011252	-55581	+	TSC_hg19_v1_chr21_+_34442554 AB463154 DQ896828 BC026989	-57065	+	TSC_hg19_v1_chr21_+_34442446 BC033290 NM_138983 AL834450 AB209791	-57174	+	BC002793 NM_000874 NM_207584 NM_207585 TSC_hg19_v1_chr21_+_34602236	102594	+	TSC_hg19_v1_chr21_+_34602281 L41942 L41944	102653	+	TSC_hg19_v1_chr21_+_34602305 BC013156 X77722 X89814 U29584	102776	+	BC011252|OLIG1|116448|oligodendrocyte transcription factor 1##DQ896828|OLIG1|116448|oligodendrocyte transcription factor 1##BC026989|OLIG1|116448|oligodendrocyte transcription factor 1##BC033290|OLIG1|116448|oligodendrocyte transcription factor 1##NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1##AL834450|OLIG1|116448|oligodendrocyte transcription factor 1##AB209791|OLIG1|116448|oligodendrocyte transcription factor 1##BC002793|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_000874|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207585|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41942|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41944|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##BC013156|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X77722|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X89814|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##U29584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2	0.0	
chr2	52022820	52022925	reg1029222.p1	3.776	+	EF539882 AK124726 NM_001135659 NM_004801	-763268	-	TSC_hg19_v1_chr2_-_51259258 BC046631	-763614	-	AF064842 NM_138735 TSC_hg19_v1_chr2_-_50574946	-1447950	-	BC019239 BC025376 NM_001008708 BC053896 BC017941 AK097260	1972084	+	AK056069 NM_001201965 BC009569 AB209795 TSC_hg19_v1_chr2_-_54014091 AK000985 AK303133 AK001283 NM_016115 NM_145863	1991206	-	NM_001127397 NM_001127398 NM_015701 TSC_hg19_v1_chr2_+_54014180 AY358717 AK001913 AY453410 BC013129 BC022228 AK315477 DQ894762	1991335	+	EF539882|NRXN1|9378|neurexin 1##AK124726|NRXN1|9378|neurexin 1##NM_001135659|NRXN1|9378|neurexin 1##NM_004801|NRXN1|9378|neurexin 1##BC046631|NRXN1|9378|neurexin 1##AF064842|NRXN1|9378|neurexin 1##NM_138735|NRXN1|9378|neurexin 1##BC019239|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC025376|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##NM_001008708|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC053896|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##BC017941|CHAC2|494143|ChaC, cation transport regulator homolog 2 (E. coli)##AK056069|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_001201965|ASB3|51130|ankyrin repeat and SOCS box containing 3##BC009569|ASB3|51130|ankyrin repeat and SOCS box containing 3##AB209795|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK000985|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK303133|ASB3|51130|ankyrin repeat and SOCS box containing 3##AK001283|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_016115|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_145863|ASB3|51130|ankyrin repeat and SOCS box containing 3##NM_001127397|ERLEC1|27248|endoplasmic reticulum lectin 1##NM_001127398|ERLEC1|27248|endoplasmic reticulum lectin 1##NM_015701|ERLEC1|27248|endoplasmic reticulum lectin 1##AY358717|ERLEC1|27248|endoplasmic reticulum lectin 1##AK001913|ERLEC1|27248|endoplasmic reticulum lectin 1##AY453410|ERLEC1|27248|endoplasmic reticulum lectin 1##BC013129|ERLEC1|27248|endoplasmic reticulum lectin 1##BC022228|ERLEC1|27248|endoplasmic reticulum lectin 1##AK315477|ERLEC1|27248|endoplasmic reticulum lectin 1##DQ894762|ERLEC1|27248|endoplasmic reticulum lectin 1	0.884937	CTCF.p2:-37:0.845
chr3	13069017	13069084	reg1041984.p1	3.776	+	TSC_hg19_v1_chr3_-_13057189 BC071805	-11832	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	-59942	-	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	-127442	-	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	45548	-	AB020713 TSC_hg19_v1_chr3_-_13384784	315715	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	392682	-	AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1##AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##AB020713|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa	0.0	
chr3	170566272	170566383	reg1035608.p1	3.776	+	TSC_hg19_v1_chr3_-_170303774 AK122655 NM_020949	-262509	-	AK098766 NM_001185056 AK294087	-427286	+	NM_005602 TSC_hg19_v1_chr3_+_170136652 AK294108 AK312923 BC013577	-429669	+	TSC_hg19_v1_chr3_-_170587985 BC107708 AL110170 BC062731 NM_001099645	21668	-	TSC_hg19_v1_chr3_-_170626397 AK311962 BC036072	60064	-	AY205258 AY205259 AY205260 AY205261 NM_020390 TSC_hg19_v1_chr3_-_170626427	60132	-	AK122655|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_020949|SLC7A14|57709|solute carrier family 7 (orphan transporter), member 14##NM_001185056|CLDN11|5010|claudin 11##AK294087|CLDN11|5010|claudin 11##NM_005602|CLDN11|5010|claudin 11##AK312923|CLDN11|5010|claudin 11##BC013577|CLDN11|5010|claudin 11##BC107708|RPL22L1|200916|ribosomal protein L22-like 1##AL110170|RPL22L1|200916|ribosomal protein L22-like 1##BC062731|RPL22L1|200916|ribosomal protein L22-like 1##NM_001099645|RPL22L1|200916|ribosomal protein L22-like 1##AK311962|EIF5A2|56648|eukaryotic translation initiation factor 5A2##BC036072|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205258|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205259|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205260|EIF5A2|56648|eukaryotic translation initiation factor 5A2##AY205261|EIF5A2|56648|eukaryotic translation initiation factor 5A2##NM_020390|EIF5A2|56648|eukaryotic translation initiation factor 5A2	0.209052	CTCF.p2:-26:0.209
chr3	37065723	37065844	reg1037851.p1	3.776	+	BX648844 NM_001167617 NM_001167618 NM_001167619 AK295359 AK298583 AK316074 AK298324 AK311365 AK302807	-30481	+	TSC_hg19_v1_chr3_+_37035008 BC006850 U07418 DQ648888 U07343 AK316264 AK312609 AK222810 AB527828 EU176254 EU176562 AY517558 AK311326 AB209848	-30760	+	NM_000249 TSC_hg19_v1_chr3_+_37034977	-30874	+	TSC_hg19_v1_chr3_-_37217813 BC017703 BC053668 AK291514 NM_001134369 NM_006309 NM_017724	152004	-	TSC_hg19_v1_chr3_+_37284761 BC045543 NM_001172713 NM_002078 BC050444 AK290550 BC023648 AK300192 AK307429 AB209693 U41740 X82834	218980	+	NM_178339 NM_178342 AJ493604 AJ493603	375231	+	BX648844|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##NM_001167617|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##NM_001167618|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##NM_001167619|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK295359|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK298583|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK316074|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK298324|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK311365|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK302807|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##BC006850|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##U07418|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##DQ648888|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##U07343|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK316264|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK312609|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK222810|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##EU176254|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##EU176562|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AY517558|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AK311326|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##AB209848|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##NM_000249|MLH1|4292|mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)##BC053668|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##AK291514|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##NM_001134369|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##NM_006309|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##NM_017724|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##BC045543|GOLGA4|2803|golgin A4##NM_001172713|GOLGA4|2803|golgin A4##NM_002078|GOLGA4|2803|golgin A4##BC050444|GOLGA4|2803|golgin A4##AK290550|GOLGA4|2803|golgin A4##BC023648|GOLGA4|2803|golgin A4##AK300192|GOLGA4|2803|golgin A4##AK307429|GOLGA4|2803|golgin A4##AB209693|GOLGA4|2803|golgin A4##U41740|GOLGA4|2803|golgin A4##X82834|GOLGA4|2803|golgin A4##NM_178339|C3orf35|339883|chromosome 3 open reading frame 35##NM_178342|C3orf35|339883|chromosome 3 open reading frame 35##AJ493604|C3orf35|339883|chromosome 3 open reading frame 35##AJ493603|C3orf35|339883|chromosome 3 open reading frame 35	0.0	
chr3	4675032	4675157	reg1004640.p1	3.776	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-139898	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-139966	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-140063	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	346022	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	346087	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	346260	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.071484	
chr5	66160465	66160576	reg1037359.p1	3.776	+	AY830839 BC018692 NM_015183	-35917	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-268312	+	BC067770 NM_139168	-719858	+	BC109069 BC109070 D83597 NM_005582 AK313177	332080	-	TSC_hg19_v1_chr5_+_67511583 NM_181523	1351060	+	TSC_hg19_v1_chr5_+_67511602 BC094795	1351087	+	AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC067770|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##NM_139168|SREK1|140890|splicing regulatory glutamine/lysine-rich protein 1##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.99762	CTCF.p2:29:0.998
chr6	161919642	161919764	reg1032057.p1	3.776	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	-224643	-	AK094629 TSC_hg19_v1_chr6_-_161413451	-506290	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-506845	+	AK057286 NM_001080378 NM_152410 BC044227	1228466	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	1229024	-	TSC_hg19_v1_chr6_-_163148797 AB245403 AK292590 BC022014	1229075	-	AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB245403|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AK292590|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##BC022014|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.166505	
chr8	71314787	71314899	reg1035187.p2	3.776	+	TSC_hg19_v1_chr8_-_70983549 AF319458 AK022595 NM_024504	-331288	-	TSC_hg19_v1_chr8_-_70983468 BC052311	-331372	-	AK308488 AF205075 AK096879 NM_030958	-567594	-	BC092442 TSC_hg19_v1_chr8_-_71315599	704	-	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	1183	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	205679	-	AF319458|PRDM14|63978|PR domain containing 14##AK022595|PRDM14|63978|PR domain containing 14##NM_024504|PRDM14|63978|PR domain containing 14##BC052311|PRDM14|63978|PR domain containing 14##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC092442|NCOA2|10499|nuclear receptor coactivator 2##NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1	0.0	
chrX	131749474	131749618	reg1035474.p1	3.776	+	BC042090 NM_001170704 TSC_hg19_v1_chrX_-_131624064	-125513	-	AF491305 EU446986 BC074775 BC074776 AB077698 AB077699 AF467070 AJ427918 AJ427919 AY072692 NM_018388 NM_133486	-175869	-	AY372211 AK002178 NM_001170701 NM_001170702 AK300248 NM_001170703	-201961	-	TSC_hg19_v1_chrX_-_132091486 BC037325 AK295118 AL049679 AB067777 AB067776 AK295041	341855	-	AK075402 TSC_hg19_v1_chrX_-_132092281 BC094718	342710	-	AK056706 NM_001077188 NM_147175	345876	-	BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)##EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC037325|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295118|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AL049679|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067777|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067776|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295041|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK056706|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_001077188|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_147175|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2	0.982539	CTCF.p2:21:0.983
chr11	65146104	65146224	reg1026471.p2	3.775	+	NM_145719	-23883	+	TSC_hg19_v1_chr11_+_65101347 BC014889 AK291944 U94585 AB463002 BT006718 DQ892397 DQ895612	-44813	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	-44880	+	BC036869 BX648573 NM_001077241 NM_182556	3960	-	NM_031904 TSC_hg19_v1_chr11_+_65154083 BC021094	7900	+	TSC_hg19_v1_chr11_+_65154127 AK074850 BC033851 AK056778 BC044658 AK291678 AK304363 BC051695	7947	+	NM_145719|TIGD3|220359|tigger transposable element derived 3##BC014889|DPF2|5977|D4, zinc and double PHD fingers family 2##AK291944|DPF2|5977|D4, zinc and double PHD fingers family 2##U94585|DPF2|5977|D4, zinc and double PHD fingers family 2##BT006718|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ892397|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ895612|DPF2|5977|D4, zinc and double PHD fingers family 2##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2##BC036869|SLC25A45|283130|solute carrier family 25, member 45##BX648573|SLC25A45|283130|solute carrier family 25, member 45##NM_001077241|SLC25A45|283130|solute carrier family 25, member 45##NM_182556|SLC25A45|283130|solute carrier family 25, member 45##NM_031904|FRMD8|83786|FERM domain containing 8##AK074850|FRMD8|83786|FERM domain containing 8##BC033851|FRMD8|83786|FERM domain containing 8##AK056778|FRMD8|83786|FERM domain containing 8##BC044658|FRMD8|83786|FERM domain containing 8##AK291678|FRMD8|83786|FERM domain containing 8##AK304363|FRMD8|83786|FERM domain containing 8##BC051695|FRMD8|83786|FERM domain containing 8	0.873294	CTCF.p2:3:0.817
chr1	249152347	249152463	reg1028010.p1	3.775	+	TSC_hg19_v1_chr1_+_249132593 BC068506 BC008872	-19759	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	-19860	+	TSC_hg19_v1_chr1_+_249132449 BC029310	-19948	+	AK309421 AL133100 TSC_hg19_v1_chr1_-_249153150 AK302187 NM_001136036 AK001070 AK298899 BC002948 AK000538 AK225535	683	-	TSC_hg19_v1_chr1_-_249153285 NM_001193328 NM_017865	897	-	TSC_hg19_v1_chr1_+_249200433 AK123219 BC063785 NM_001017434 NM_170725 BX647065 AK298248	48018	+	BC068506|ZNF672|79894|zinc finger protein 672##BC008872|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672##BC029310|ZNF672|79894|zinc finger protein 672##AK309421|ZNF692|55657|zinc finger protein 692##AL133100|ZNF692|55657|zinc finger protein 692##AK302187|ZNF692|55657|zinc finger protein 692##NM_001136036|ZNF692|55657|zinc finger protein 692##AK001070|ZNF692|55657|zinc finger protein 692##AK298899|ZNF692|55657|zinc finger protein 692##BC002948|ZNF692|55657|zinc finger protein 692##AK000538|ZNF692|55657|zinc finger protein 692##AK225535|ZNF692|55657|zinc finger protein 692##NM_001193328|ZNF692|55657|zinc finger protein 692##NM_017865|ZNF692|55657|zinc finger protein 692##AK123219|PGBD2|267002|piggyBac transposable element derived 2##BC063785|PGBD2|267002|piggyBac transposable element derived 2##NM_001017434|PGBD2|267002|piggyBac transposable element derived 2##NM_170725|PGBD2|267002|piggyBac transposable element derived 2##BX647065|PGBD2|267002|piggyBac transposable element derived 2##AK298248|PGBD2|267002|piggyBac transposable element derived 2	0.24022	CTCF.p2:69:0.240
chr13	99175807	99175945	reg1028939.p1	3.775	+	AF083420 NM_003576	-1581	-	TSC_hg19_v1_chr13_+_99058147 AF339817	-117670	+	AB464689 EU446571 AF539427 BC025388 BC017585 NM_178861	-346371	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	53178	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	53246	-	TSC_hg19_v1_chr13_-_99229363 BC035578 BC065378 NM_001032296	53435	-	AF083420|STK24|8428|serine/threonine kinase 24##NM_003576|STK24|8428|serine/threonine kinase 24##EU446571|RNF113B|140432|ring finger protein 113B##AF539427|RNF113B|140432|ring finger protein 113B##BC025388|RNF113B|140432|ring finger protein 113B##BC017585|RNF113B|140432|ring finger protein 113B##NM_178861|RNF113B|140432|ring finger protein 113B##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24##BC035578|STK24|8428|serine/threonine kinase 24##BC065378|STK24|8428|serine/threonine kinase 24##NM_001032296|STK24|8428|serine/threonine kinase 24	0.023072	
chr14	74058472	74058590	reg1038166.p1	3.775	+	BC090945 NM_152331	-122	+	TSC_hg19_v1_chr14_+_74035979 DQ893488 DQ896406 BC004436 BC006500 L40401 AY005822 CU678722	-22534	+	AK001939 DQ082755 AK223635 NM_006821 BC006335 TSC_hg19_v1_chr14_+_74035788	-22756	+	DQ082756 NM_001037162	25016	+	NM_001201366 NM_031427 AF542071 BC005343 AL833654 AK315392	53122	+	CR457112 BC039577 AK290980 TSC_hg19_v1_chr14_-_74181085 AF320308 BC007712 NM_006029	122230	-	BC090945|ACOT4|122970|acyl-CoA thioesterase 4##NM_152331|ACOT4|122970|acyl-CoA thioesterase 4##DQ893488|ACOT2|10965|acyl-CoA thioesterase 2##DQ896406|ACOT2|10965|acyl-CoA thioesterase 2##BC004436|ACOT2|10965|acyl-CoA thioesterase 2##BC006500|ACOT2|10965|acyl-CoA thioesterase 2##L40401|ACOT2|10965|acyl-CoA thioesterase 2##AY005822|ACOT2|10965|acyl-CoA thioesterase 2##AK001939|ACOT2|10965|acyl-CoA thioesterase 2##DQ082755|ACOT2|10965|acyl-CoA thioesterase 2##AK223635|ACOT2|10965|acyl-CoA thioesterase 2##NM_006821|ACOT2|10965|acyl-CoA thioesterase 2##BC006335|ACOT2|10965|acyl-CoA thioesterase 2##DQ082756|ACOT6|641372|acyl-CoA thioesterase 6##NM_001037162|ACOT6|641372|acyl-CoA thioesterase 6##NM_001201366|DNAL1|83544|dynein, axonemal, light chain 1##NM_031427|DNAL1|83544|dynein, axonemal, light chain 1##AF542071|DNAL1|83544|dynein, axonemal, light chain 1##BC005343|DNAL1|83544|dynein, axonemal, light chain 1##AL833654|DNAL1|83544|dynein, axonemal, light chain 1##AK315392|DNAL1|83544|dynein, axonemal, light chain 1##CR457112|PNMA1|9240|paraneoplastic antigen MA1##BC039577|PNMA1|9240|paraneoplastic antigen MA1##AK290980|PNMA1|9240|paraneoplastic antigen MA1##AF320308|PNMA1|9240|paraneoplastic antigen MA1##BC007712|PNMA1|9240|paraneoplastic antigen MA1##NM_006029|PNMA1|9240|paraneoplastic antigen MA1	0.030979	
chr14	79163851	79163944	reg1031404.p1	3.775	+	AB018286 BC152457 NM_004796	-293805	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-897447	+	AB464230 BT020060 BT020061 CR457433 BC051806 BC065286 TSC_hg19_v1_chr14_-_78227500 AK302246 AX775981 U51432 BC105585 BC108903 AF045184 AK292274 NM_012245 AK293619 AK316087	-936388	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	581807	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	1514007	-	AK292210 NM_000793	1533499	-	AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BT020060|SNW1|22938|SNW domain containing 1##BT020061|SNW1|22938|SNW domain containing 1##CR457433|SNW1|22938|SNW domain containing 1##BC065286|SNW1|22938|SNW domain containing 1##AK302246|SNW1|22938|SNW domain containing 1##AX775981|SNW1|22938|SNW domain containing 1##U51432|SNW1|22938|SNW domain containing 1##BC105585|SNW1|22938|SNW domain containing 1##BC108903|SNW1|22938|SNW domain containing 1##AF045184|SNW1|22938|SNW domain containing 1##AK292274|SNW1|22938|SNW domain containing 1##NM_012245|SNW1|22938|SNW domain containing 1##AK293619|SNW1|22938|SNW domain containing 1##AK316087|SNW1|22938|SNW domain containing 1##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II	0.012189	
chr15	44663129	44663247	reg1031908.p1	3.775	+	TSC_hg19_v1_chr15_+_44581110 AK298564 AL832333 AK291026 CU680228 CU687742	-82053	+	BC063480 AY358086 TSC_hg19_v1_chr15_+_44580965	-82229	+	AK098265 TSC_hg19_v1_chr15_+_44580937	-82247	+	NM_016396	56390	+	TSC_hg19_v1_chr15_+_44719826 AK291230 AF161478 AF161543	56608	+	TSC_hg19_v1_chr15_+_44719836 BC018623 AK226094 DQ128104 BC035744	56722	+	AK298564|CASC4|113201|cancer susceptibility candidate 4##AL832333|CASC4|113201|cancer susceptibility candidate 4##AK291026|CASC4|113201|cancer susceptibility candidate 4##BC063480|CASC4|113201|cancer susceptibility candidate 4##AY358086|CASC4|113201|cancer susceptibility candidate 4##AK098265|CASC4|113201|cancer susceptibility candidate 4##NM_016396|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##AK291230|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##AF161478|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##AF161543|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##BC018623|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##AK226094|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##DQ128104|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2##BC035744|CTDSPL2|51496|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2	0.0	
chr19	11563023	11563094	reg1036916.p1	3.775	+	AB385574 AF144075 TSC_hg19_v1_chr19_+_11546995 BC013586	-16089	+	TSC_hg19_v1_chr19_+_11546486 AK290433	-16516	+	J03075 TSC_hg19_v1_chr19_+_11546469 Z36798 AK225390	-16590	+	BC080533 BC011875 TSC_hg19_v1_chr19_-_11564576	1514	-	TSC_hg19_v1_chr19_-_11565617 BC068222	2570	-	AY036909 L26405 D26158 BC014144 NM_001420 NM_032281 TSC_hg19_v1_chr19_-_11591862	28595	-	AF144075|PRKCSH|5589|protein kinase C substrate 80K-H##BC013586|PRKCSH|5589|protein kinase C substrate 80K-H##AK290433|PRKCSH|5589|protein kinase C substrate 80K-H##J03075|PRKCSH|5589|protein kinase C substrate 80K-H##Z36798|PRKCSH|5589|protein kinase C substrate 80K-H##AK225390|PRKCSH|5589|protein kinase C substrate 80K-H##BC080533|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC011875|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##AY036909|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##L26405|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##D26158|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC014144|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_001420|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_032281|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	0.0	
chr19	1946113	1946208	reg1041633.p2	3.775	+	TSC_hg19_v1_chr19_+_1941192 BC018693 BC018699	-4972	+	TSC_hg19_v1_chr19_+_1941164 NM_001319	-4997	+	TSC_hg19_v1_chr19_+_1905397 AK074967 AK126544 AK307641 BC016509 BC062598 AK307700 AK092056 AX747336 BC011747 BC011824 NM_138422	-40755	+	TSC_hg19_v1_chr19_-_2015708 AB527352 AF355797 NM_017797 AK225831	69510	-	AL137615 TSC_hg19_v1_chr19_-_2039474 AK024347 AK097012	93341	-	TSC_hg19_v1_chr19_-_2041865 AK092536	95736	-	BC018693|CSNK1G2|1455|casein kinase 1, gamma 2##BC018699|CSNK1G2|1455|casein kinase 1, gamma 2##NM_001319|CSNK1G2|1455|casein kinase 1, gamma 2##AK074967|SCAMP4|113178|secretory carrier membrane protein 4##AK307641|SCAMP4|113178|secretory carrier membrane protein 4##BC016509|SCAMP4|113178|secretory carrier membrane protein 4##BC062598|SCAMP4|113178|secretory carrier membrane protein 4##AK307700|SCAMP4|113178|secretory carrier membrane protein 4##AK092056|SCAMP4|113178|secretory carrier membrane protein 4##BC011747|SCAMP4|113178|secretory carrier membrane protein 4##BC011824|ADAT3|113179|adenosine deaminase, tRNA-specific 3##NM_138422|ADAT3|113179|adenosine deaminase, tRNA-specific 3##AF355797|BTBD2|55643|BTB (POZ) domain containing 2##NM_017797|BTBD2|55643|BTB (POZ) domain containing 2##AK225831|BTBD2|55643|BTB (POZ) domain containing 2##AL137615|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK024347|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK097012|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK092536|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2	0.823473	CTCF.p2:-25:0.823
chr19	50401006	50401187	reg1030722.p3	3.775	+	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	-943	-	TSC_hg19_v1_chr19_+_50381392 AK090606 AX746531	-19638	+	NM_001168222 NM_024682 TSC_hg19_v1_chr19_+_50380945 BC003516 AK022230 AK300007 AK309412 AB449903 AB590884 CU678472	-20247	+	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	12006	-	NM_012068 AK290592	30892	+	NM_001193646 AK091985 AB021663 AK024402 TSC_hg19_v1_chr19_+_50432461 AB073613 BC005174	31338	+	BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##AK090606|TBC1D17|79735|TBC1 domain family, member 17##NM_001168222|TBC1D17|79735|TBC1 domain family, member 17##NM_024682|TBC1D17|79735|TBC1 domain family, member 17##BC003516|TBC1D17|79735|TBC1 domain family, member 17##AK022230|TBC1D17|79735|TBC1 domain family, member 17##AK300007|TBC1D17|79735|TBC1 domain family, member 17##AK309412|TBC1D17|79735|TBC1 domain family, member 17##AB449903|TBC1D17|79735|TBC1 domain family, member 17##CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5##NM_001193646|ATF5|22809|activating transcription factor 5##AK091985|ATF5|22809|activating transcription factor 5##AB021663|ATF5|22809|activating transcription factor 5##AK024402|ATF5|22809|activating transcription factor 5##AB073613|ATF5|22809|activating transcription factor 5##BC005174|ATF5|22809|activating transcription factor 5	0.0	
chr2	231889361	231889440	reg1046982.p1	3.775	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	-28508	+	BC032694 NM_005683	-99460	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-159678	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	12837	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	32177	+	TSC_hg19_v1_chr2_+_231921606 BC064398	32201	+	NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC064398|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.0	
chr3	52312139	52312274	reg1022778.p1	3.775	+	BC018941 AK074290 TSC_hg19_v1_chr3_-_52294468	-17759	-	AK056894 NM_001122870 BC009644	-32002	+	TSC_hg19_v1_chr3_+_52279770 NM_144641 AB474372 AK096681	-32379	+	TSC_hg19_v1_chr3_-_52312406 AB590669 AY358264 BX648628 AK291380	184	-	TSC_hg19_v1_chr3_-_52312656 NM_025222	450	-	AF448855 AY172690 BC036862 NM_001144951 NM_145262 TSC_hg19_v1_chr3_+_52321852 AK074215	9637	+	BC018941|WDR82|80335|WD repeat domain 82##AK074290|WDR82|80335|WD repeat domain 82##AK056894|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##NM_001122870|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##BC009644|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##NM_144641|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##AB474372|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##AK096681|PPM1M|132160|protein phosphatase, Mg2+/Mn2+ dependent, 1M##AY358264|WDR82|80335|WD repeat domain 82##BX648628|WDR82|80335|WD repeat domain 82##AK291380|WDR82|80335|WD repeat domain 82##NM_025222|WDR82|80335|WD repeat domain 82##AF448855|GLYCTK|132158|glycerate kinase##AY172690|GLYCTK|132158|glycerate kinase##BC036862|GLYCTK|132158|glycerate kinase##NM_001144951|GLYCTK|132158|glycerate kinase##NM_145262|GLYCTK|132158|glycerate kinase##AK074215|GLYCTK|132158|glycerate kinase	0.865788	CTCF.p2:-34:0.866
chr5	131975667	131975848	reg1032291.p2	3.775	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-83117	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	-96565	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	-149276	-	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	18133	+	NM_000589 NM_172348	33615	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	97460	-	NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A	0.0	
chr5	156642306	156642486	reg1030185.p2	3.775	+	BC094701 AB209622 D13720 NM_005546 BC109077 BC109078 AK312846 AK303609 AB590549	-34479	+	AY973323 CU692472 AF465821 BC025397 AK057543 BC022035 BC025409 BC025998 NM_130899	-49168	-	NM_001100816 TSC_hg19_v1_chr5_-_156569881 AK123613 AF031383 BC005250 BC006968 AK308393 NM_004270	-72544	-	TSC_hg19_v1_chr5_+_156693105 AL136549 NM_001037333 AK294220 AK295865 AK297401 AK303702 AB032994 AF160973 NM_001037332	50856	+	BC011762 BC021008 NM_014376	53960	+	AK289701 BC022570 NM_001001343	130304	-	AB209622|ITK|3702|IL2-inducible T-cell kinase##D13720|ITK|3702|IL2-inducible T-cell kinase##NM_005546|ITK|3702|IL2-inducible T-cell kinase##BC109077|ITK|3702|IL2-inducible T-cell kinase##BC109078|ITK|3702|IL2-inducible T-cell kinase##AK312846|ITK|3702|IL2-inducible T-cell kinase##AK303609|ITK|3702|IL2-inducible T-cell kinase##AY973323|FAM71B|153745|family with sequence similarity 71, member B##AF465821|FAM71B|153745|family with sequence similarity 71, member B##BC025397|FAM71B|153745|family with sequence similarity 71, member B##AK057543|FAM71B|153745|family with sequence similarity 71, member B##BC022035|FAM71B|153745|family with sequence similarity 71, member B##BC025409|FAM71B|153745|family with sequence similarity 71, member B##BC025998|FAM71B|153745|family with sequence similarity 71, member B##NM_130899|FAM71B|153745|family with sequence similarity 71, member B##NM_001100816|MED7|9443|mediator complex subunit 7##AF031383|MED7|9443|mediator complex subunit 7##BC005250|MED7|9443|mediator complex subunit 7##BC006968|MED7|9443|mediator complex subunit 7##AK308393|MED7|9443|mediator complex subunit 7##NM_004270|MED7|9443|mediator complex subunit 7##AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK289701|FNDC9|408263|fibronectin type III domain containing 9##BC022570|FNDC9|408263|fibronectin type III domain containing 9##NM_001001343|FNDC9|408263|fibronectin type III domain containing 9	0.0	
chr5	94166369	94166489	reg1037421.p1	3.775	+	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	-212056	+	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	-212172	-	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	-719109	-	AK025997 TSC_hg19_v1_chr5_-_94224607	58177	-	AY656716 AK058012 BC030005 AK057694 TSC_hg19_v1_chr5_-_94417350	250839	-	NM_001002796	251115	-	BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1##AY656716|MCTP1|79772|multiple C2 domains, transmembrane 1##AK058012|MCTP1|79772|multiple C2 domains, transmembrane 1##BC030005|MCTP1|79772|multiple C2 domains, transmembrane 1##AK057694|MCTP1|79772|multiple C2 domains, transmembrane 1##NM_001002796|MCTP1|79772|multiple C2 domains, transmembrane 1	0.615814	CTCF.p2:0:0.616
chr6	113918533	113918675	reg1038815.p2	3.775	+	AK122906 NM_001013734	-1250073	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1342709	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-1342799	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	260130	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	373668	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	373732	-	AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2	0.0	
chr6_cox_hap2	2301899	2302021	reg1037776.p1	3.775	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.997496	CTCF.p2:5:0.997
chr7	92260941	92261122	reg1034248.p2	3.775	+	TSC_hg19_v1_chr7_-_92219705 BC079834 BC090868 BC057771 AK125498 AL833918 BC017874 NM_001040057 NM_152789 BC062706	-41333	-	TSC_hg19_v1_chr7_-_92219660 BC032461 BC157872	-41389	-	BC104865 BC104867 BC143576 NM_032120 CR933641 BC044570 AL136619 BC020919 BC033561 CR936726 AK294626 AK294812 AF161422 BC065716 CR533549	-102925	+	AB528631 CU690894 X66365 TSC_hg19_v1_chr7_-_92462894	201736	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	202189	-	AK313491 TSC_hg19_v1_chr7_-_92465884	204867	-	BC090868|FAM133B|257415|family with sequence similarity 133, member B##BC057771|FAM133B|257415|family with sequence similarity 133, member B##AK125498|FAM133B|257415|family with sequence similarity 133, member B##AL833918|FAM133B|257415|family with sequence similarity 133, member B##BC017874|FAM133B|257415|family with sequence similarity 133, member B##NM_001040057|FAM133B|257415|family with sequence similarity 133, member B##NM_152789|FAM133B|257415|family with sequence similarity 133, member B##BC062706|FAM133B|257415|family with sequence similarity 133, member B##BC032461|FAM133B|257415|family with sequence similarity 133, member B##BC157872|FAM133B|257415|family with sequence similarity 133, member B##BC104865|RBM48|84060|RNA binding motif protein 48##BC104867|RBM48|84060|RNA binding motif protein 48##BC143576|RBM48|84060|RNA binding motif protein 48##NM_032120|RBM48|84060|RNA binding motif protein 48##CR933641|RBM48|84060|RNA binding motif protein 48##BC044570|RBM48|84060|RNA binding motif protein 48##AL136619|RBM48|84060|RNA binding motif protein 48##BC020919|RBM48|84060|RNA binding motif protein 48##BC033561|RBM48|84060|RNA binding motif protein 48##CR936726|RBM48|84060|RNA binding motif protein 48##AK294626|RBM48|84060|RNA binding motif protein 48##AK294812|RBM48|84060|RNA binding motif protein 48##AF161422|RBM48|84060|RNA binding motif protein 48##BC065716|RBM48|84060|RNA binding motif protein 48##CR533549|RBM48|84060|RNA binding motif protein 48##X66365|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6	0.0	
chr9	93080712	93080805	reg1040440.p1	3.775	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-860777	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-967751	-	BC054500 NM_001142287 NM_006378	-986148	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	324361	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	483278	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	483309	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.97746	CTCF.p2:14:0.977
chr1	10196477	10196572	reg1036684.p1	3.774	+	AB014584 TSC_hg19_v1_chr1_+_10093218	-103311	+	TSC_hg19_v1_chr1_+_10093015 AB028839 NM_001105562 NM_006048	-103509	+	BC063013 NM_052960 BC033883 AF399927 AK312027 AY145438 CU687628	-139240	+	TSC_hg19_v1_chr1_+_10270680 AK308121 NM_015074 NM_183416 AF257176 AY139835	74247	+	NM_002631 TSC_hg19_v1_chr1_+_10459125 AK300952 AK290404 AK296889 AK303898 AK304423 BC000368 U30255 AB463169 AK298830	262605	+	AF521016 NM_198544 NM_199006 NM_199294	293634	+	AB014584|UBE4B|10277|ubiquitination factor E4B##AB028839|UBE4B|10277|ubiquitination factor E4B##NM_001105562|UBE4B|10277|ubiquitination factor E4B##NM_006048|UBE4B|10277|ubiquitination factor E4B##BC063013|RBP7|116362|retinol binding protein 7, cellular##NM_052960|RBP7|116362|retinol binding protein 7, cellular##BC033883|RBP7|116362|retinol binding protein 7, cellular##AF399927|RBP7|116362|retinol binding protein 7, cellular##AK312027|RBP7|116362|retinol binding protein 7, cellular##AY145438|RBP7|116362|retinol binding protein 7, cellular##AK308121|KIF1B|23095|kinesin family member 1B##NM_015074|KIF1B|23095|kinesin family member 1B##NM_183416|KIF1B|23095|kinesin family member 1B##AF257176|KIF1B|23095|kinesin family member 1B##AY139835|KIF1B|23095|kinesin family member 1B##NM_002631|PGD|5226|phosphogluconate dehydrogenase##AK300952|PGD|5226|phosphogluconate dehydrogenase##AK290404|PGD|5226|phosphogluconate dehydrogenase##AK296889|PGD|5226|phosphogluconate dehydrogenase##AK303898|PGD|5226|phosphogluconate dehydrogenase##AK304423|PGD|5226|phosphogluconate dehydrogenase##BC000368|PGD|5226|phosphogluconate dehydrogenase##U30255|PGD|5226|phosphogluconate dehydrogenase##AK298830|PGD|5226|phosphogluconate dehydrogenase##AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1	0.022755	
chr11	65264602	65264700	reg1023916.p1	3.774	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	-71128	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	-72251	+	TSC_hg19_v1_chr11_+_65190274 AK026198	-74373	+	TSC_hg19_v1_chr11_+_65265158 EF177381	552	+	TSC_hg19_v1_chr11_+_65266515 BC025986 BX538238 FJ209305	1850	+	TSC_hg19_v1_chr11_+_65266869 BC104662	2148	+	AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##EF177381|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BC025986|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BX538238|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)	0.0	
chr11	73742588	73742749	reg1033782.p3	3.774	+	NM_003356 NM_022803	-22387	-	TSC_hg19_v1_chr11_-_73694300 AK025742	-48325	-	TSC_hg19_v1_chr11_-_73693886 AK222540 AK222557 NM_003355	-48783	-	TSC_hg19_v1_chr11_-_73881923 AB231764 AK092089 AX747350 BC037429 NM_015531	139400	-	TSC_hg19_v1_chr11_+_73882299 AK022725	139614	+	TSC_hg19_v1_chr11_+_73882350 BC003046 BC050705 AK225647 AF157028 NM_016147 AK001381	139675	+	NM_003356|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##NM_022803|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##AK025742|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3##AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3##NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3##AK022725|PPME1|51400|protein phosphatase methylesterase 1##BC003046|PPME1|51400|protein phosphatase methylesterase 1##BC050705|PPME1|51400|protein phosphatase methylesterase 1##AK225647|PPME1|51400|protein phosphatase methylesterase 1##AF157028|PPME1|51400|protein phosphatase methylesterase 1##NM_016147|PPME1|51400|protein phosphatase methylesterase 1##AK001381|PPME1|51400|protein phosphatase methylesterase 1	0.0	
chr1	31950193	31950373	reg1036785.p1	3.774	+	AK093784 AK316357 AX748305 NM_001199039 NM_018565 AK296118	-63596	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	-64217	+	NM_001199037 AK298512	-67250	+	NM_001204414 NM_022164 TSC_hg19_v1_chr1_+_32042115 AK292770 AK075398 AK296322 AK298382	91820	+	TSC_hg19_v1_chr1_+_32042122 AY358421	91839	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	91859	+	AK093784|SERINC2|347735|serine incorporator 2##AK316357|SERINC2|347735|serine incorporator 2##NM_001199039|SERINC2|347735|serine incorporator 2##NM_018565|SERINC2|347735|serine incorporator 2##AK296118|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##NM_001204414|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_022164|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK292770|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK075398|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK296322|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298382|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AY358421|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1	0.0	
chr19	17281705	17281773	reg1039894.p1	3.774	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-95146	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-95418	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-144199	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	44433	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	44466	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	55295	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.0	
chr19	36231352	36231479	reg1035866.p1	3.774	+	TSC_hg19_v1_chr19_+_36209125 AF186605	-22229	+	TSC_hg19_v1_chr19_+_36208923 AJ007041 NM_014727	-22485	+	AF130255 NM_014383	-27586	+	BC126481 BC126483 BC144205 AX775837 AK026226 NM_024660	1915	-	AB528887 CU676860 DQ892422 DQ895636 BC062474 BC049208 AY569437 BC021186 TSC_hg19_v1_chr19_-_36236316 AK094213 AY461582 BC010865 AK311551 NM_001040425 NM_144987 AK303983	4901	-	TSC_hg19_v1_chr19_+_36236539 NM_172341 AF220053 BC009575 AK312233 BC008939	5104	+	AF186605|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##AF130255|ZBTB32|27033|zinc finger and BTB domain containing 32##NM_014383|ZBTB32|27033|zinc finger and BTB domain containing 32##BC126481|IGFLR1|79713|IGF-like family receptor 1##BC126483|IGFLR1|79713|IGF-like family receptor 1##BC144205|IGFLR1|79713|IGF-like family receptor 1##AX775837|IGFLR1|79713|IGF-like family receptor 1##AK026226|IGFLR1|79713|IGF-like family receptor 1##NM_024660|IGFLR1|79713|IGF-like family receptor 1##DQ892422|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##DQ895636|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##BC062474|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##BC049208|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##AY569437|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##BC021186|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##AK094213|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##AY461582|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##BC010865|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##NM_001040425|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##NM_144987|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##AK303983|U2AF1L4|199746|U2 small nuclear RNA auxiliary factor 1-like 4##NM_172341|PSENEN|55851|presenilin enhancer 2 homolog (C. elegans)##AF220053|PSENEN|55851|presenilin enhancer 2 homolog (C. elegans)##BC009575|PSENEN|55851|presenilin enhancer 2 homolog (C. elegans)##AK312233|PSENEN|55851|presenilin enhancer 2 homolog (C. elegans)	0.0	
chr19	919719	919882	reg1037750.p2	3.774	+	TSC_hg19_v1_chr19_+_917306 BC141812 NM_032551 AY253982 BC140825 AB051065 AF343725 AJ309020 AY029541 AY253981 BC111094 EU883577	-2407	+	NM_138774 TSC_hg19_v1_chr19_-_913224	-6576	-	TSC_hg19_v1_chr19_-_913199 BC012775	-6603	-	TSC_hg19_v1_chr19_+_926038 AY845638 BC060828 NM_005224	6211	+	TSC_hg19_v1_chr19_+_984344 NM_024100 BC000040 BC001648 CU674808	64534	+	TSC_hg19_v1_chr19_+_1000312 AY507106 AY507107 NM_138690	80565	+	BC141812|KISS1R|84634|KISS1 receptor##NM_032551|KISS1R|84634|KISS1 receptor##AY253982|KISS1R|84634|KISS1 receptor##BC140825|KISS1R|84634|KISS1 receptor##AB051065|KISS1R|84634|KISS1 receptor##AF343725|KISS1R|84634|KISS1 receptor##AJ309020|KISS1R|84634|KISS1 receptor##AY029541|KISS1R|84634|KISS1 receptor##AY253981|KISS1R|84634|KISS1 receptor##EU883577|KISS1R|84634|KISS1 receptor##NM_138774|R3HDM4|91300|R3H domain containing 4##BC012775|R3HDM4|91300|R3H domain containing 4##AY845638|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC060828|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_005224|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_024100|WDR18|57418|WD repeat domain 18##BC000040|WDR18|57418|WD repeat domain 18##BC001648|WDR18|57418|WD repeat domain 18##AY507106|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##AY507107|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_138690|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B	0.0	
chr2	154143784	154143907	reg1040527.p1	3.774	+	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-568701	+	BC028741 TSC_hg19_v1_chr2_+_153575133	-568714	+	TSC_hg19_v1_chr2_+_153575123 AK315657	-568730	+	AK311958 BC002908 AK074808 AB043585 NM_019845	191406	-	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	584599	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	1411344	+	BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##BC028741|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK315657|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	0.994028	CTCF.p2:16:0.994
chr3	113874408	113874496	reg1037240.p1	3.774	+	TSC_hg19_v1_chr3_+_113775661 AK023022	-98778	+	TSC_hg19_v1_chr3_+_113775628 AK299313 BC039265 NM_024638 AL833709 AK296938	-98846	+	AK125304 AK295855 AK302488 BC150592 AF509494 NM_020817	-99041	-	AY228457 AY228458 NM_000796 NM_033663 AY228454	23464	-	NM_007136 X65233	81972	-	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	138401	+	AK023022|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AK299313|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##BC039265|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##NM_024638|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AL833709|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AK296938|QTRTD1|79691|queuine tRNA-ribosyltransferase domain containing 1##AK125304|KIAA1407|57577|KIAA1407##AK295855|KIAA1407|57577|KIAA1407##AK302488|KIAA1407|57577|KIAA1407##BC150592|KIAA1407|57577|KIAA1407##AF509494|KIAA1407|57577|KIAA1407##NM_020817|KIAA1407|57577|KIAA1407##AY228457|DRD3|1814|dopamine receptor D3##AY228458|DRD3|1814|dopamine receptor D3##NM_000796|DRD3|1814|dopamine receptor D3##NM_033663|DRD3|1814|dopamine receptor D3##AY228454|DRD3|1814|dopamine receptor D3##NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains	1.76309	CTCF.p2:8:0.934	CTCF.p2:-23:0.819
chr3	141741434	141741518	reg1011379.p2	3.774	+	AL080206 NM_001178140	-22268	-	TSC_hg19_v1_chr3_+_141595539 U51478 CU680074	-145899	+	TSC_hg19_v1_chr3_+_141595484 NM_001679 AK131061 AK293697 BC001469 BC011835	-146039	+	BC002405 AK303634 U18422 BC007976 AK303181 TSC_hg19_v1_chr3_-_141747469 NM_001178141 NM_001178142 NM_006286	5994	-	TSC_hg19_v1_chr3_-_141868338 AK314786 BC013993 U35117 NM_001178138 NM_001178139	126848	-	DQ891607 DQ894800 TSC_hg19_v1_chr3_-_141944428 AK313792 BX648681 BC032470 AK127641 BX648359 AK310761	202889	-	AL080206|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178140|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U51478|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##NM_001679|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK131061|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK293697|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##BC001469|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##BC011835|ATP1B3|483|ATPase, Na+/K+ transporting, beta 3 polypeptide##AK303634|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U18422|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC007976|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK303181|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178141|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178142|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_006286|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##AK314786|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##BC013993|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##U35117|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178138|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##NM_001178139|TFDP2|7029|transcription factor Dp-2 (E2F dimerization partner 2)##DQ891607|GK5|256356|glycerol kinase 5 (putative)##DQ894800|GK5|256356|glycerol kinase 5 (putative)##AK313792|GK5|256356|glycerol kinase 5 (putative)##BX648681|GK5|256356|glycerol kinase 5 (putative)##BC032470|GK5|256356|glycerol kinase 5 (putative)##AK127641|GK5|256356|glycerol kinase 5 (putative)##BX648359|GK5|256356|glycerol kinase 5 (putative)##AK310761|GK5|256356|glycerol kinase 5 (putative)	0.0	
chr5	156998361	156998471	reg1029994.p1	3.774	+	TSC_hg19_v1_chr5_+_156887210 AK026158 AK308830 AK309242	-111146	+	AK296972 NM_001099287 NM_001172292	-111390	+	TSC_hg19_v1_chr5_+_156820161 AK172724	-178228	+	AB462931 TSC_hg19_v1_chr5_-_157002728	4300	-	AF311317 AF326918 TSC_hg19_v1_chr5_-_157002784 Y13786 AK091464 AK308182 AX747000 NM_033274	4389	-	AB527685 TSC_hg19_v1_chr5_-_157079170	80712	-	AK026158|NIPAL4|348938|NIPA-like domain containing 4##AK308830|NIPAL4|348938|NIPA-like domain containing 4##AK309242|NIPAL4|348938|NIPA-like domain containing 4##AK296972|NIPAL4|348938|NIPA-like domain containing 4##NM_001099287|NIPAL4|348938|NIPA-like domain containing 4##NM_001172292|NIPAL4|348938|NIPA-like domain containing 4##AK172724|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF311317|ADAM19|8728|ADAM metallopeptidase domain 19##AF326918|ADAM19|8728|ADAM metallopeptidase domain 19##Y13786|ADAM19|8728|ADAM metallopeptidase domain 19##AK091464|ADAM19|8728|ADAM metallopeptidase domain 19##AK308182|ADAM19|8728|ADAM metallopeptidase domain 19##NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19	0.0	
chr7	43148014	43148124	reg1011180.p1	3.774	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-176100	+	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	-176268	-	BC002900 AB528708 CR450317 CU690460 D00760 BC047697 TSC_hg19_v1_chr7_-_42971774 AK311369 BX641097 AK222976	-176316	-	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	4157	+	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	474625	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	621025	-	AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC002900|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##CR450317|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##D00760|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC047697|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BX641097|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK222976|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44	0.0	
chr9	136857327	136857474	reg1000028.p1	3.774	+	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-252414	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-253922	-	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-355892	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	46	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	75793	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	76226	-	BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3	0.012476	
chr10	112261135	112261260	reg1040006.p1	3.773	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-3446	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-196497	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-196604	-	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	66295	+	AF067163 TSC_hg19_v1_chr10_+_112344155	82918	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	142932	+	NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20	0.0	
chr10	78662836	78662928	reg1041301.p1	3.773	+	AF267860 NM_032024	-1120364	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1501317	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1501401	-	AF118141 TSC_hg19_v1_chr10_-_79397246	734343	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	734454	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	734524	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.0	
chr11	64018842	64018924	reg1026470.p2	3.773	+	TSC_hg19_v1_chr11_-_64014411 NM_138689	-4468	-	TSC_hg19_v1_chr11_-_64014383 X91195	-4491	-	BC014522 BC094817 TSC_hg19_v1_chr11_-_64014352	-4563	-	TSC_hg19_v1_chr11_+_64018991 NM_000932 NM_001184883 Z26649	110	+	TSC_hg19_v1_chr11_+_64019017 BC146645 BC142681 BC032659 AB385031	174	+	AK300209 NM_001170726	32927	+	NM_138689|PPP1R14B|26472|protein phosphatase 1, regulatory (inhibitor) subunit 14B##X91195|PPP1R14B|26472|protein phosphatase 1, regulatory (inhibitor) subunit 14B##BC014522|PPP1R14B|26472|protein phosphatase 1, regulatory (inhibitor) subunit 14B##BC094817|PPP1R14B|26472|protein phosphatase 1, regulatory (inhibitor) subunit 14B##NM_000932|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##NM_001184883|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##Z26649|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##BC146645|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##BC142681|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##BC032659|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##AB385031|PLCB3|5331|phospholipase C, beta 3 (phosphatidylinositol-specific)##AK300209|GPR137|56834|G protein-coupled receptor 137##NM_001170726|GPR137|56834|G protein-coupled receptor 137	0.967506	CTCF.p2:23:0.968
chr1	17446119	17446300	reg1015544.p1	3.773	+	AB587350 AB023211 AB030176 BC009701 TSC_hg19_v1_chr1_-_17445947 AK295783 NM_007365	-302	-	DQ403007 TSC_hg19_v1_chr1_-_17380528 AK312056 U17248 BC007840 NM_003000	-65634	-	AL354615 AY461712 TSC_hg19_v1_chr1_-_17338424 BC030267 AK290210 NM_001141973 NM_001141974 NM_022089	-107826	-	AK314644 AK026652 AK225541 NM_013358 AB033768 BC130574 BC136402 HQ258487	85456	+	AB026831 NM_016233 BC109091 BC041592 BC109092	129390	+	AF229067 AK314839 NM_012387 AB017919 AK290507 AK309637 BC025718 AB527709 CU693030	188494	+	AB023211|PADI2|11240|peptidyl arginine deiminase, type II##AB030176|PADI2|11240|peptidyl arginine deiminase, type II##BC009701|PADI2|11240|peptidyl arginine deiminase, type II##AK295783|PADI2|11240|peptidyl arginine deiminase, type II##NM_007365|PADI2|11240|peptidyl arginine deiminase, type II##DQ403007|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AK312056|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##U17248|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##BC007840|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##NM_003000|SDHB|6390|succinate dehydrogenase complex, subunit B, iron sulfur (Ip)##AL354615|ATP13A2|23400|ATPase type 13A2##AY461712|ATP13A2|23400|ATPase type 13A2##BC030267|ATP13A2|23400|ATPase type 13A2##AK290210|ATP13A2|23400|ATPase type 13A2##NM_001141973|ATP13A2|23400|ATPase type 13A2##NM_001141974|ATP13A2|23400|ATPase type 13A2##NM_022089|ATP13A2|23400|ATPase type 13A2##AK314644|PADI1|29943|peptidyl arginine deiminase, type I##AK026652|PADI1|29943|peptidyl arginine deiminase, type I##AK225541|PADI1|29943|peptidyl arginine deiminase, type I##NM_013358|PADI1|29943|peptidyl arginine deiminase, type I##AB033768|PADI1|29943|peptidyl arginine deiminase, type I##BC130574|PADI1|29943|peptidyl arginine deiminase, type I##BC136402|PADI1|29943|peptidyl arginine deiminase, type I##HQ258487|PADI1|29943|peptidyl arginine deiminase, type I##AB026831|PADI3|51702|peptidyl arginine deiminase, type III##NM_016233|PADI3|51702|peptidyl arginine deiminase, type III##BC109091|PADI3|51702|peptidyl arginine deiminase, type III##BC041592|PADI3|51702|peptidyl arginine deiminase, type III##BC109092|PADI3|51702|peptidyl arginine deiminase, type III##AF229067|PADI4|23569|peptidyl arginine deiminase, type IV##AK314839|PADI4|23569|peptidyl arginine deiminase, type IV##NM_012387|PADI4|23569|peptidyl arginine deiminase, type IV##AB017919|PADI4|23569|peptidyl arginine deiminase, type IV##AK290507|PADI4|23569|peptidyl arginine deiminase, type IV##AK309637|PADI4|23569|peptidyl arginine deiminase, type IV##BC025718|PADI4|23569|peptidyl arginine deiminase, type IV	0.0	
chr13	49221875	49221982	reg1036342.p1	3.773	+	AK122778 TSC_hg19_v1_chr13_-_49110119	-111810	-	AB209543 TSC_hg19_v1_chr13_-_49107365	-114564	-	TSC_hg19_v1_chr13_-_49107313 AK315703 NM_001268	-114639	-	AB041947 AB038269 BC096832 BC069160 NM_020377 AB590816	58857	+	TSC_hg19_v1_chr13_+_49550058 AJ749706 NM_001079673 BX648706 BX648141 AK056071	328232	+	TSC_hg19_v1_chr13_+_49550791 BC051029	328793	+	AK122778|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AB209543|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK315703|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##NM_001268|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AB041947|CYSLTR2|57105|cysteinyl leukotriene receptor 2##AB038269|CYSLTR2|57105|cysteinyl leukotriene receptor 2##BC096832|CYSLTR2|57105|cysteinyl leukotriene receptor 2##BC069160|CYSLTR2|57105|cysteinyl leukotriene receptor 2##NM_020377|CYSLTR2|57105|cysteinyl leukotriene receptor 2##AJ749706|FNDC3A|22862|fibronectin type III domain containing 3A##NM_001079673|FNDC3A|22862|fibronectin type III domain containing 3A##BX648706|FNDC3A|22862|fibronectin type III domain containing 3A##BX648141|FNDC3A|22862|fibronectin type III domain containing 3A##AK056071|FNDC3A|22862|fibronectin type III domain containing 3A##BC051029|FNDC3A|22862|fibronectin type III domain containing 3A	0.0	
chr17	57427720	57427845	reg1034061.p1	3.773	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	-18764	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	-129884	+	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	-140385	+	AF461690 NM_001166301 NM_024612 TSC_hg19_v1_chr17_+_57642970 BC024187 AK299151 AK095681 AF260270 AK226048 AB384723 DQ890909 DQ894060	215205	+	TSC_hg19_v1_chr17_+_57697037 NM_004859	269263	+	TSC_hg19_v1_chr17_+_57697265 BC054489 BX640615	269488	+	NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)##NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_004859|CLTC|1213|clathrin, heavy chain (Hc)##BC054489|CLTC|1213|clathrin, heavy chain (Hc)##BX640615|CLTC|1213|clathrin, heavy chain (Hc)	0.0	
chr18	56338716	56338840	reg1023224.p2	3.773	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	-50	+	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	-137	+	BX647796 NM_052947	-42590	-	TSC_hg19_v1_chr18_+_56338790 AB026118	19	+	TSC_hg19_v1_chr18_+_56338830 AB528440 DQ892319 DQ895521	67	+	NM_018181 AF295077 BC130618 BC130620	191341	+	AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AB026118|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##DQ892319|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##DQ895521|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_018181|ZNF532|55205|zinc finger protein 532##AF295077|ZNF532|55205|zinc finger protein 532##BC130618|ZNF532|55205|zinc finger protein 532##BC130620|ZNF532|55205|zinc finger protein 532	0.0	
chr19	54345523	54345669	reg1029429.p1	3.773	+	CU688384 DQ891084 DQ894266 AK290772 BC028069 AK095460 AY095146 AY154467 AY116204 AY116205 AY116206 AY116207 NM_144687	-18059	-	AF231021 NM_033297	-33638	-	NM_001012728	-210287	+	NM_001020820 TSC_hg19_v1_chr19_+_54369637	24035	+	TSC_hg19_v1_chr19_+_54371136 AK075276 AK294400 BC095412 NM_001020819 NM_138373 AK093999 AX748404 AX775819 AK316566	25537	+	TSC_hg19_v1_chr19_+_54371159 AY358582	25561	+	DQ891084|NLRP12|91662|NLR family, pyrin domain containing 12##DQ894266|NLRP12|91662|NLR family, pyrin domain containing 12##AK290772|NLRP12|91662|NLR family, pyrin domain containing 12##BC028069|NLRP12|91662|NLR family, pyrin domain containing 12##AK095460|NLRP12|91662|NLR family, pyrin domain containing 12##AY095146|NLRP12|91662|NLR family, pyrin domain containing 12##AY154467|NLRP12|91662|NLR family, pyrin domain containing 12##AY116204|NLRP12|91662|NLR family, pyrin domain containing 12##AY116205|NLRP12|91662|NLR family, pyrin domain containing 12##AY116206|NLRP12|91662|NLR family, pyrin domain containing 12##AY116207|NLRP12|91662|NLR family, pyrin domain containing 12##NM_144687|NLRP12|91662|NLR family, pyrin domain containing 12##AF231021|NLRP12|91662|NLR family, pyrin domain containing 12##NM_033297|NLRP12|91662|NLR family, pyrin domain containing 12##NM_001012728|DPRX|503834|divergent-paired related homeobox##NM_001020820|MYADM|91663|myeloid-associated differentiation marker##AK075276|MYADM|91663|myeloid-associated differentiation marker##AK294400|MYADM|91663|myeloid-associated differentiation marker##BC095412|MYADM|91663|myeloid-associated differentiation marker##NM_001020819|MYADM|91663|myeloid-associated differentiation marker##NM_138373|MYADM|91663|myeloid-associated differentiation marker##AK093999|MYADM|91663|myeloid-associated differentiation marker##AX775819|MYADM|91663|myeloid-associated differentiation marker##AK316566|MYADM|91663|myeloid-associated differentiation marker##AY358582|MYADM|91663|myeloid-associated differentiation marker	0.995006	CTCF.p2:-74:0.995
chr2	202144141	202144268	reg1036310.p1	3.773	+	NM_033356 X98173	-18948	+	NM_001080125 AF422926 BC068050 AF422925 AF422929 X98172 AY429525	-21407	+	NM_001080124 NM_001228 NM_033355 NM_033358 AF422927 AF422928 BC010390 AK310630 BC017031 U60520 X98176	-45979	+	AK124115 BC031603 NM_001127391 NM_139163 AK292283	77889	-	TSC_hg19_v1_chr2_-_202316179 AK314384 AK054763	171943	-	TSC_hg19_v1_chr2_-_202316274 AB038951 BC040668 BC041330 BC048093 NM_015049 AL832573	172084	-	NM_033356|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98173|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001080125|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422926|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC068050|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422929|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98172|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001080124|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001228|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033355|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033358|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422927|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422928|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC010390|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310630|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC017031|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##U60520|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98176|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK124115|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##BC031603|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_001127391|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_139163|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##AK292283|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##AK314384|TRAK2|66008|trafficking protein, kinesin binding 2##AK054763|TRAK2|66008|trafficking protein, kinesin binding 2##AB038951|TRAK2|66008|trafficking protein, kinesin binding 2##BC040668|TRAK2|66008|trafficking protein, kinesin binding 2##BC041330|TRAK2|66008|trafficking protein, kinesin binding 2##BC048093|TRAK2|66008|trafficking protein, kinesin binding 2##NM_015049|TRAK2|66008|trafficking protein, kinesin binding 2##AL832573|TRAK2|66008|trafficking protein, kinesin binding 2	0.084197	
chr22	37378314	37378495	reg1028144.p2	3.773	+	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	-68746	+	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	-121296	+	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	-162885	-	BC042635 CR456416 NM_001163857 NM_178552	25453	-	D87292 TSC_hg19_v1_chr22_-_37415489 AK091874 BC010148 AK000862 AK223521 AK301300 NM_003312	37077	-	NM_001013436 NM_001130517 NM_021126 TSC_hg19_v1_chr22_+_37415789	37341	+	BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##BC042635|C22orf33|339669|chromosome 22 open reading frame 33##CR456416|C22orf33|339669|chromosome 22 open reading frame 33##NM_001163857|C22orf33|339669|chromosome 22 open reading frame 33##NM_178552|C22orf33|339669|chromosome 22 open reading frame 33##D87292|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK091874|TST|7263|thiosulfate sulfurtransferase (rhodanese)##BC010148|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK000862|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK223521|TST|7263|thiosulfate sulfurtransferase (rhodanese)##AK301300|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_003312|TST|7263|thiosulfate sulfurtransferase (rhodanese)##NM_001013436|MPST|4357|mercaptopyruvate sulfurtransferase##NM_001130517|MPST|4357|mercaptopyruvate sulfurtransferase##NM_021126|MPST|4357|mercaptopyruvate sulfurtransferase	0.940724	CTCF.p2:-34:0.941
chr3	152236293	152236402	reg1029204.p1	3.773	+	AY358260 NM_001123228	-177569	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-219154	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	-249002	-	NM_002563 Z49205	316388	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	643679	+	TSC_hg19_v1_chr3_+_152880058 BC012362	643701	+	AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family	0.705981	CTCF.p2:6:0.706
chr4	15008187	15008338	reg1046989.p1	3.773	+	TSC_hg19_v1_chr4_+_15005451 AY247744 AY255519 BC103939 BC103940 BC103941 BC103942 BC105925	-2801	+	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	-3965	+	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	-4267	-	BX647781 NM_001135170 AK314802 BC022187 BC024015	333323	+	NM_001135171	367912	+	NM_031911 AF329839	421385	+	AY247744|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##AY255519|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103939|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103940|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103941|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC103942|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC105925|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##BX647781|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135170|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AK314802|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC022187|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##BC024015|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_001135171|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##NM_031911|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7##AF329839|C1QTNF7|114905|C1q and tumor necrosis factor related protein 7	0.0	
chr4	185747407	185747515	reg1027003.p1	3.773	+	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	-227	-	TSC_hg19_v1_chr4_-_185747123 L09229 AK292798	-360	-	TSC_hg19_v1_chr4_-_185726866 AK296826	-20558	-	BC140795 BC144567 BC144568 BC144569 NM_001029887	192577	+	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	317009	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	377683	-	AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##L09229|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK292798|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##BC140795|HELT|391723|helt bHLH transcription factor##BC144567|HELT|391723|helt bHLH transcription factor##BC144569|HELT|391723|helt bHLH transcription factor##NM_001029887|HELT|391723|helt bHLH transcription factor##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430	0.0	
chr6_qbl_hap6	4053964	4054066	reg1032701.p1	3.773	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.08447	
chr9	114794485	114794622	reg1034044.p1	3.773	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-135086	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-135439	+	AL833535 NM_173521	-248778	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	142967	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	300734	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	301296	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.023592	
chr9	127058981	127059048	reg1033731.p2	3.773	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	-4382	+	TSC_hg19_v1_chr9_+_127054267 NM_001166170 NM_001166171	-4755	+	TSC_hg19_v1_chr9_+_127020588 AL832574	-38424	+	TSC_hg19_v1_chr9_+_127119114 BC042968	60155	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	118706	-	AY278562 NM_001161808	154408	+	AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166170|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166171|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144	0.0	
chr9	84138002	84138092	reg1039398.p1	3.773	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	-1950362	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	-1950523	+	TSC_hg19_v1_chr9_+_82186879 NM_007005	-1951161	+	BC010100 NM_005077	165548	-	TSC_hg19_v1_chr9_-_84304463 AB209854	166380	-	NM_001145197 AK125847 AK308327	405324	+	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC010100|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_005077|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##AB209854|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4##AK125847|FAM75D4|389761|family with sequence similarity 75, member D4##AK308327|FAM75D4|389761|family with sequence similarity 75, member D4	0.98644	CTCF.p2:2:0.986
chrX	48664619	48664767	reg1033799.p2	3.773	+	AB385398 AF132609 BT006649 BC013737 AK303012 TSC_hg19_v1_chrX_+_48661268	-3506	+	TSC_hg19_v1_chrX_+_48660616 AK295884 BC011498 AK095124	-4083	+	TSC_hg19_v1_chrX_+_48660473 BC005872 AK024083 AJ011972 NM_006044 AB020708 BC069243	-4189	+	AB093575 NM_181532	22589	+	DQ893525 TSC_hg19_v1_chrX_-_48693984 BC002851 AF181562 NM_013271 BC094731	29302	-	TSC_hg19_v1_chrX_-_48755052 AJ005895 BC010142 AF077039 BC091473 BC028017 AK290207 BC029446	90360	-	AF132609|HDAC6|10013|histone deacetylase 6##BT006649|HDAC6|10013|histone deacetylase 6##BC013737|HDAC6|10013|histone deacetylase 6##AK303012|HDAC6|10013|histone deacetylase 6##AK295884|HDAC6|10013|histone deacetylase 6##BC011498|HDAC6|10013|histone deacetylase 6##AK095124|HDAC6|10013|histone deacetylase 6##BC005872|HDAC6|10013|histone deacetylase 6##AK024083|HDAC6|10013|histone deacetylase 6##AJ011972|HDAC6|10013|histone deacetylase 6##NM_006044|HDAC6|10013|histone deacetylase 6##AB020708|HDAC6|10013|histone deacetylase 6##BC069243|HDAC6|10013|histone deacetylase 6##AB093575|ERAS|3266|ES cell expressed Ras##NM_181532|ERAS|3266|ES cell expressed Ras##DQ893525|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor##BC002851|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor##AF181562|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor##NM_013271|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor##BC094731|PCSK1N|27344|proprotein convertase subtilisin/kexin type 1 inhibitor##AJ005895|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##BC010142|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##AF077039|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##BC091473|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##BC028017|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##AK290207|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)##BC029446|TIMM17B|10245|translocase of inner mitochondrial membrane 17 homolog B (yeast)	0.207861	CTCF.p2:-15:0.208
chr10	22947103	22947216	reg1039198.p2	3.772	+	TSC_hg19_v1_chr10_+_22726003 AK295718	-221160	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-312703	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-336994	+	AK294817 TSC_hg19_v1_chr10_-_23003038	55878	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	56331	-	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	269822	+	AK295718|LOC100289455|100289455|uncharacterized LOC100289455##NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3	0.0	
chr10	74856416	74856505	reg1012246.p3	3.772	+	AK311349 TSC_hg19_v1_chr10_-_74714574	-141888	-	AF349540 BC093996 BC111946 BC143532 AY358032 NM_032562 AF339053 AK313712 TSC_hg19_v1_chr10_-_74714543	-141949	-	AK096435 NM_152635 BC126440 AY358339 AY013707 TSC_hg19_v1_chr10_+_74653529	-203027	+	TSC_hg19_v1_chr10_-_74856621 M24486 M24487 AK312593 AK222960 BC034998	145	-	TSC_hg19_v1_chr10_-_74856725 NM_000917 NM_001017962 NM_001142595 NM_001142596	310	-	NM_015901 BC031224 AK303235 TSC_hg19_v1_chr10_+_74870272 AK300980 AK309755 AK316538 BC046173 BC038833	13791	+	AK311349|PLA2G12B|84647|phospholipase A2, group XIIB##AF349540|PLA2G12B|84647|phospholipase A2, group XIIB##BC093996|PLA2G12B|84647|phospholipase A2, group XIIB##BC111946|PLA2G12B|84647|phospholipase A2, group XIIB##BC143532|PLA2G12B|84647|phospholipase A2, group XIIB##AY358032|PLA2G12B|84647|phospholipase A2, group XIIB##NM_032562|PLA2G12B|84647|phospholipase A2, group XIIB##AF339053|PLA2G12B|84647|phospholipase A2, group XIIB##AK313712|PLA2G12B|84647|phospholipase A2, group XIIB##AK096435|OIT3|170392|oncoprotein induced transcript 3##NM_152635|OIT3|170392|oncoprotein induced transcript 3##BC126440|OIT3|170392|oncoprotein induced transcript 3##AY358339|OIT3|170392|oncoprotein induced transcript 3##AY013707|OIT3|170392|oncoprotein induced transcript 3##M24486|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##M24487|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##AK312593|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##AK222960|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##BC034998|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_000917|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001017962|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001142595|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_001142596|P4HA1|5033|prolyl 4-hydroxylase, alpha polypeptide I##NM_015901|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC031224|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK303235|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK300980|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK309755|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##AK316538|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC046173|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13##BC038833|NUDT13|25961|nudix (nucleoside diphosphate linked moiety X)-type motif 13	0.0	
chr11	314299	314434	reg1029252.p2	3.772	+	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	-355	+	NM_006435 TSC_hg19_v1_chr11_+_308199 BC009696 DQ891667 DQ894615 BT009859 CR456894 CR541874 X02490	-6196	+	BC150562 BC150563 NM_001025295	-14845	-	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	6478	-	TSC_hg19_v1_chr11_-_320925 X57352	6621	-	TSC_hg19_v1_chr11_+_369724 NM_178537 AB089939 BC131528	55399	+	J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_006435|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC009696|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ891667|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ894615|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BT009859|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR456894|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR541874|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##X02490|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3##X57352|IFITM3|10410|interferon induced transmembrane protein 3##NM_178537|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##AB089939|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC131528|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4	0.0	
chr1	220164500	220164601	reg1033154.p1	3.772	+	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	-62585	-	AB464233 TSC_hg19_v1_chr1_-_220101784	-62759	-	BC036078 TSC_hg19_v1_chr1_-_220101540	-63021	-	TSC_hg19_v1_chr1_-_220219802 BC136465 BC105983 BC015494 BC034797	55244	-	TSC_hg19_v1_chr1_-_220219848 BC058921 CR933648	55292	-	TSC_hg19_v1_chr1_-_220219873 AK296755 BC067841	55313	-	AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10##BC036078|SLC30A10|55532|solute carrier family 30, member 10##BC136465|EPRS|2058|glutamyl-prolyl-tRNA synthetase##BC105983|EPRS|2058|glutamyl-prolyl-tRNA synthetase##BC015494|EPRS|2058|glutamyl-prolyl-tRNA synthetase##BC034797|EPRS|2058|glutamyl-prolyl-tRNA synthetase##BC058921|EPRS|2058|glutamyl-prolyl-tRNA synthetase##CR933648|EPRS|2058|glutamyl-prolyl-tRNA synthetase##AK296755|EPRS|2058|glutamyl-prolyl-tRNA synthetase##BC067841|EPRS|2058|glutamyl-prolyl-tRNA synthetase	0.956965	CTCF.p2:-17:0.957
chr1	247289696	247289820	reg1032901.p2	3.772	+	TSC_hg19_v1_chr1_-_247275541 AK127619 NM_207401	-14136	-	TSC_hg19_v1_chr1_-_247267631 AK022668 AX721155 AK056020 AX721139 BC015312 NM_001142572 NM_024804	-22097	-	TSC_hg19_v1_chr1_-_247242116 AK126366 NM_001204220 NM_033213	-47645	-	BC032514 BC096349 BC096350 BC096351 BC099661 BC013605 AK054647 NM_001243740 NM_003431	45526	-	BC126341 BC126367 NM_173858	129565	+	TSC_hg19_v1_chr1_-_247494994 BC007263 NM_032752	205259	-	AK127619|C1orf229|388759|chromosome 1 open reading frame 229##NM_207401|C1orf229|388759|chromosome 1 open reading frame 229##AK022668|ZNF669|79862|zinc finger protein 669##AK056020|ZNF669|79862|zinc finger protein 669##BC015312|ZNF669|79862|zinc finger protein 669##NM_001142572|ZNF669|79862|zinc finger protein 669##NM_024804|ZNF669|79862|zinc finger protein 669##AK126366|ZNF670-ZNF695|100533111|ZNF670-ZNF695 readthrough##NM_001204220|ZNF670|93474|zinc finger protein 670##NM_033213|ZNF670|93474|zinc finger protein 670##BC032514|ZNF124|7678|zinc finger protein 124##BC096349|ZNF124|7678|zinc finger protein 124##BC096350|ZNF124|7678|zinc finger protein 124##BC096351|ZNF124|7678|zinc finger protein 124##BC099661|ZNF124|7678|zinc finger protein 124##BC013605|ZNF124|7678|zinc finger protein 124##AK054647|ZNF124|7678|zinc finger protein 124##NM_001243740|ZNF124|7678|zinc finger protein 124##NM_003431|ZNF124|7678|zinc finger protein 124##BC126341|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC126367|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##NM_173858|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC007263|ZNF496|84838|zinc finger protein 496##NM_032752|ZNF496|84838|zinc finger protein 496	0.0	
chr12	51646448	51646569	reg1028240.p1	3.772	+	TSC_hg19_v1_chr12_+_51632658 AB385271 CU677910 AK125855	-13836	+	TSC_hg19_v1_chr12_+_51632650 D31767 BC002334 BC007900 AK095963	-13873	+	TSC_hg19_v1_chr12_+_51632609 AK303828 AK290119 AK293330 AY430097 BX647278	-13909	+	BC120965 BC120966 BC008712 TSC_hg19_v1_chr12_-_51663988 NM_001033873 BC001400 AK001839 NM_001031628	17577	-	TSC_hg19_v1_chr12_-_51717901 CU690454 AF146531	71360	-	TSC_hg19_v1_chr12_-_51717911 AK093638 AB032698 AK000783 AK225911 NM_016293	71413	-	AK125855|DAZAP2|9802|DAZ associated protein 2##D31767|DAZAP2|9802|DAZ associated protein 2##BC002334|DAZAP2|9802|DAZ associated protein 2##BC007900|DAZAP2|9802|DAZ associated protein 2##AK095963|DAZAP2|9802|DAZ associated protein 2##AK303828|DAZAP2|9802|DAZ associated protein 2##AK290119|DAZAP2|9802|DAZ associated protein 2##AK293330|DAZAP2|9802|DAZ associated protein 2##AY430097|DAZAP2|9802|DAZ associated protein 2##BX647278|DAZAP2|9802|DAZ associated protein 2##BC120965|SMAGP|57228|small cell adhesion glycoprotein##BC120966|SMAGP|57228|small cell adhesion glycoprotein##BC008712|SMAGP|57228|small cell adhesion glycoprotein##NM_001033873|SMAGP|57228|small cell adhesion glycoprotein##BC001400|SMAGP|57228|small cell adhesion glycoprotein##AK001839|SMAGP|57228|small cell adhesion glycoprotein##NM_001031628|SMAGP|57228|small cell adhesion glycoprotein##AF146531|BIN2|51411|bridging integrator 2##AK093638|BIN2|51411|bridging integrator 2##AB032698|BIN2|51411|bridging integrator 2##AK000783|BIN2|51411|bridging integrator 2##AK225911|BIN2|51411|bridging integrator 2##NM_016293|BIN2|51411|bridging integrator 2	0.0	
chr15	83134417	83134546	reg1037476.p1	3.772	+	NM_198181 CR936812	-35740	+	CR936602 NM_001164465	-116303	-	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-189591	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	74755	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	106054	-	CU690752 BC050629 NM_030594	182193	-	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1	0.315969	CTCF.p2:-26:0.316
chr15	91525091	91525271	reg1031682.p2	3.772	+	BC064606 BC113826 TSC_hg19_v1_chr15_+_91499981	-25206	+	TSC_hg19_v1_chr15_+_91498113 NM_001017919 NM_033544 BC140708 BC140709 BC094739	-27090	+	TSC_hg19_v1_chr15_+_91478539 AK000905 AK293538 BC037992 DQ892953 DQ896200 CU691534	-46627	+	AF044588 BC003138 TSC_hg19_v1_chr15_-_91537766 AK297117 AK304094 BC005140 AK312600 NM_003981 NM_199413 NM_199414	12585	-	CU677627 TSC_hg19_v1_chr15_-_91565525	40321	-	BC016445 TSC_hg19_v1_chr15_-_91565785 AK074863 AF201694 AK315721 AF308803 AK027754 AK300608 AK293688 AK308480 NM_018668	40589	-	BC064606|RCCD1|91433|RCC1 domain containing 1##BC113826|RCCD1|91433|RCC1 domain containing 1##NM_001017919|RCCD1|91433|RCC1 domain containing 1##NM_033544|RCCD1|91433|RCC1 domain containing 1##BC140708|RCCD1|91433|RCC1 domain containing 1##BC140709|RCCD1|91433|RCC1 domain containing 1##BC094739|RCCD1|91433|RCC1 domain containing 1##AK000905|UNC45A|55898|unc-45 homolog A (C. elegans)##AK293538|UNC45A|55898|unc-45 homolog A (C. elegans)##BC037992|UNC45A|55898|unc-45 homolog A (C. elegans)##DQ892953|UNC45A|55898|unc-45 homolog A (C. elegans)##DQ896200|UNC45A|55898|unc-45 homolog A (C. elegans)##AF044588|PRC1|9055|protein regulator of cytokinesis 1##BC003138|PRC1|9055|protein regulator of cytokinesis 1##AK297117|PRC1|9055|protein regulator of cytokinesis 1##AK304094|PRC1|9055|protein regulator of cytokinesis 1##BC005140|PRC1|9055|protein regulator of cytokinesis 1##AK312600|PRC1|9055|protein regulator of cytokinesis 1##NM_003981|PRC1|9055|protein regulator of cytokinesis 1##NM_199413|PRC1|9055|protein regulator of cytokinesis 1##NM_199414|PRC1|9055|protein regulator of cytokinesis 1##BC016445|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK074863|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AF201694|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK315721|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AF308803|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK027754|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK300608|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK293688|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##AK308480|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)##NM_018668|VPS33B|26276|vacuolar protein sorting 33 homolog B (yeast)	0.0	
chr16	33733435	33733551	reg1037281.p1	3.772	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-471360	+	AL133588 NM_016212	-471979	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-527895	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	12921779	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	12921813	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	12989569	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.980264	CTCF.p2:9:0.980
chr17	62134020	62134137	reg1031702.p2	3.772	+	TSC_hg19_v1_chr17_-_62097985 AK295382 AK309953 NM_001099786 NM_001099787 NM_001099788 NM_001099789	-36096	-	NM_000873 TSC_hg19_v1_chr17_-_62084314	-49773	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	-58316	+	TSC_hg19_v1_chr17_-_62207401 AB385116 BC130405 BC130407	73320	-	AF059198 AB209869 TSC_hg19_v1_chr17_-_62207502 NM_001433 AK292403	73438	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	206508	-	AK295382|ICAM2|3384|intercellular adhesion molecule 2##NM_001099786|ICAM2|3384|intercellular adhesion molecule 2##NM_001099787|ICAM2|3384|intercellular adhesion molecule 2##NM_001099788|ICAM2|3384|intercellular adhesion molecule 2##NM_001099789|ICAM2|3384|intercellular adhesion molecule 2##NM_000873|ICAM2|3384|intercellular adhesion molecule 2##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##BC130405|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130407|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AF059198|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AB209869|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##NM_001433|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK292403|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2	0.027504	
chr20	22161024	22161123	reg1036086.p1	3.772	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	-474540	+	TSC_hg19_v1_chr20_+_21686296 NM_006192	-474779	+	NM_002509	-666410	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	403843	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	404002	-	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	405029	-	BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1##NM_006192|PAX1|5075|paired box 1##NM_002509|NKX2-2|4821|NK2 homeobox 2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2	0.843956	CTCF.p2:8:0.844
chr20	52673678	52673778	reg1037856.p1	3.772	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-462929	-	AF041259 NM_006526	-474093	-	AK302570 NM_001193421	-871907	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	13334	-	AK315220 NM_003657	13575	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	116792	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.954951	CTCF.p2:4:0.955
chr2	107203968	107204065	reg1030573.p1	3.772	+	NM_001144013	-119216	-	TSC_hg19_v1_chr2_-_106810781 NM_025076	-393211	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	-393258	-	FJ433885 TSC_hg19_v1_chr2_-_107502508	298469	-	AB058780 NM_001142351 TSC_hg19_v1_chr2_-_107502624	298603	-	TSC_hg19_v1_chr2_-_107503063 FJ433884	299046	-	NM_001144013|RGPD3|653489|RANBP2-like and GRIP domain containing 3##NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	0.978379	CTCF.p2:16:0.978
chr21	34638254	34638435	reg1026306.p2	3.772	+	TSC_hg19_v1_chr21_+_34602305 BC013156 X77722 X89814 U29584	-35942	+	TSC_hg19_v1_chr21_+_34602281 L41942 L41944	-36065	+	BC002793 NM_000874 NM_207584 NM_207585 TSC_hg19_v1_chr21_+_34602236	-36124	+	TSC_hg19_v1_chr21_+_34638697 AK313348 NM_000628 BC001903 Z17227	357	+	TSC_hg19_v1_chr21_+_34638753 AK299961 AB590138 DQ892552 DQ895763 BT009777	410	+	TSC_hg19_v1_chr21_+_34697236 NM_000629	58874	+	BC013156|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X77722|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X89814|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##U29584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41942|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41944|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##BC002793|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_000874|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207585|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##AK313348|IL10RB|3588|interleukin 10 receptor, beta##NM_000628|IL10RB|3588|interleukin 10 receptor, beta##BC001903|IL10RB|3588|interleukin 10 receptor, beta##Z17227|IL10RB|3588|interleukin 10 receptor, beta##AK299961|IL10RB|3588|interleukin 10 receptor, beta##DQ892552|IL10RB|3588|interleukin 10 receptor, beta##DQ895763|IL10RB|3588|interleukin 10 receptor, beta##BT009777|IL10RB|3588|interleukin 10 receptor, beta##NM_000629|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1	0.0	
chr3	127936959	127937114	reg1037159.p1	3.772	+	TSC_hg19_v1_chr3_+_127872325 BC007933 AF268872	-64598	+	TSC_hg19_v1_chr3_+_127872314 NM_021937	-64727	+	AB451224 AB451347 AB590226 BT007057 DQ469310 DQ891448 DQ894627 BC012886 TSC_hg19_v1_chr3_-_127842656 AB012122 AF099084 BC000519 BC002993 AF070735 AJ010058 AK222575 Y18418 AK222563 AK312290 NM_003707	-94413	-	BC050288 NM_153330	249054	-	TSC_hg19_v1_chr3_+_128199744 CU677364 CU678039	262767	+	M77810 BC015577 BC018988 BC051272 NM_001145662 M68891 TSC_hg19_v1_chr3_-_128206775	269703	-	BC007933|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AF268872|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##NM_021937|EEFSEC|60678|eukaryotic elongation factor, selenocysteine-tRNA-specific##AB451224|RUVBL1|8607|RuvB-like 1 (E. coli)##AB451347|RUVBL1|8607|RuvB-like 1 (E. coli)##BT007057|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ469310|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ891448|RUVBL1|8607|RuvB-like 1 (E. coli)##DQ894627|RUVBL1|8607|RuvB-like 1 (E. coli)##BC012886|RUVBL1|8607|RuvB-like 1 (E. coli)##AB012122|RUVBL1|8607|RuvB-like 1 (E. coli)##AF099084|RUVBL1|8607|RuvB-like 1 (E. coli)##BC002993|RUVBL1|8607|RuvB-like 1 (E. coli)##AF070735|RUVBL1|8607|RuvB-like 1 (E. coli)##AJ010058|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222575|RUVBL1|8607|RuvB-like 1 (E. coli)##Y18418|RUVBL1|8607|RuvB-like 1 (E. coli)##AK222563|RUVBL1|8607|RuvB-like 1 (E. coli)##AK312290|RUVBL1|8607|RuvB-like 1 (E. coli)##NM_003707|RUVBL1|8607|RuvB-like 1 (E. coli)##BC050288|DNAJB8|165721|DnaJ (Hsp40) homolog, subfamily B, member 8##NM_153330|DNAJB8|165721|DnaJ (Hsp40) homolog, subfamily B, member 8##M77810|GATA2|2624|GATA binding protein 2##BC015577|GATA2|2624|GATA binding protein 2##BC018988|GATA2|2624|GATA binding protein 2##BC051272|GATA2|2624|GATA binding protein 2##NM_001145662|GATA2|2624|GATA binding protein 2##M68891|GATA2|2624|GATA binding protein 2	0.0	
chr3	48463767	48463848	reg1034612.p1	3.772	+	AY247969 NM_001159927 NM_001159929 NM_207102 BC101303 BC101304 BC101305 BC101306	-50071	+	NM_001080525	-93977	-	DQ892283 DQ895483 AK308970 AF051941 TSC_hg19_v1_chr3_-_48342858 U90449 BC001808 BC012828 NM_005793 AK222555 AK294809 AK307332 AK297364 AK309090	-120956	-	TSC_hg19_v1_chr3_-_48471023 AB007867 BC146793 NM_002673	7073	-	TSC_hg19_v1_chr3_-_48471516 BC066773 NM_001130082 AK296776	7690	-	BC011993 AK022498 NM_024661	17716	-	AY247969|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12##NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12##BC101303|FBXW12|285231|F-box and WD repeat domain containing 12##BC101304|FBXW12|285231|F-box and WD repeat domain containing 12##BC101305|FBXW12|285231|F-box and WD repeat domain containing 12##BC101306|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)##DQ892283|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##DQ895483|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK308970|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AF051941|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##U90449|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC001808|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC012828|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##NM_005793|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK222555|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK294809|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK297364|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AB007867|PLXNB1|5364|plexin B1##BC146793|PLXNB1|5364|plexin B1##NM_002673|PLXNB1|5364|plexin B1##BC066773|PLXNB1|5364|plexin B1##NM_001130082|PLXNB1|5364|plexin B1##AK296776|PLXNB1|5364|plexin B1##BC011993|CCDC51|79714|coiled-coil domain containing 51##AK022498|CCDC51|79714|coiled-coil domain containing 51##NM_024661|CCDC51|79714|coiled-coil domain containing 51	0.294725	CTCF.p2:5:0.295
chr6	41500118	41500184	reg1027902.p2	3.772	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-196585	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-245727	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-304083	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	14008	+	TSC_hg19_v1_chr6_+_41514342 BC052803	14186	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	106071	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	0.04096	
chr8	11362713	11362881	reg1030264.p1	3.772	+	S76617 NM_001715 BC018703 BC004473 BC038555	-11204	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-38568	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-157793	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	198923	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	264471	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	297387	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.0	
chr8	47868375	47868520	reg1001883.p1	3.772	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	-4720842	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-4872800	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-4872814	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	305048	+	TSC_hg19_v1_chr8_+_48173521 AK303579	305072	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	305085	+	AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146	0.0	
chr9	103477152	103477225	reg1011829.p2	3.772	+	NM_001018116 AK300099 TSC_hg19_v1_chr9_+_103340380 EU487253 BC090888	-136799	+	TSC_hg19_v1_chr9_+_103235637 BC035056 DQ891732 DQ894909	-241459	+	TSC_hg19_v1_chr9_+_103235495 NM_003692	-241684	+	NM_207299 AK303807 TSC_hg19_v1_chr9_+_103791087	313878	+	AK000307 AK225306 BC029380 NM_017753 TSC_hg19_v1_chr9_+_103947336	470138	+	NM_001127610 AK315347	668634	-	NM_001018116|MURC|347273|muscle-related coiled-coil protein##AK300099|MURC|347273|muscle-related coiled-coil protein##EU487253|MURC|347273|muscle-related coiled-coil protein##BC090888|MURC|347273|muscle-related coiled-coil protein##BC035056|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ891732|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##DQ894909|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_003692|TMEFF1|8577|transmembrane protein with EGF-like and two follistatin-like domains 1##NM_207299|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK303807|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK000307|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##AK225306|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##BC029380|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_017753|LPPR1|54886|lipid phosphate phosphatase-related protein type 1##NM_001127610|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)##AK315347|BAAT|570|bile acid CoA: amino acid N-acyltransferase (glycine N-choloyltransferase)	0.999787	
chr9	130678264	130678445	reg1038255.p1	3.772	+	TSC_hg19_v1_chr9_-_130667604 AY358672 AK124217 AK310850	-10739	-	TSC_hg19_v1_chr9_-_130661892 BC036102	-16444	-	TSC_hg19_v1_chr9_-_130661883 AK023900	-16475	-	BC036705 TSC_hg19_v1_chr9_-_130679297 AK292049 AK000600 NM_175039 NM_175040	906	-	TSC_hg19_v1_chr9_-_130689700 BC042184 NM_173492	11379	-	NM_001135219	14721	-	AY358672|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK124217|LOC100131355|100131355|uncharacterized LOC100131355##AK310850|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC036102|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK023900|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##BC036705|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AK292049|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##AK000600|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##NM_175039|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##NM_175040|ST6GALNAC4|27090|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4##BC042184|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##NM_173492|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1##NM_001135219|PIP5KL1|138429|phosphatidylinositol-4-phosphate 5-kinase-like 1	0.0	
chr9	140420066	140420155	reg1001436.p1	3.772	+	AY255128 AY255129 AY255130 AY255131 AY255132 NM_001130969 NM_001130970 NM_001130971 NM_001178064 NM_015537 TSC_hg19_v1_chr9_-_140353787	-66308	-	TSC_hg19_v1_chr9_-_140353758 AK074602 BC072412	-66350	-	TSC_hg19_v1_chr9_-_140353612 BC110498	-66478	-	AK125060 AK126267 TSC_hg19_v1_chr9_-_140444881 NM_001098537 NM_152286	24800	-	NM_032477 TSC_hg19_v1_chr9_+_140446353 BC040035 AY232291	26249	+	CU675946 TSC_hg19_v1_chr9_-_140473350 AK307180 BC003123 BC016349 BC017335	53180	-	AY255128|NELF|26012|nasal embryonic LHRH factor##AY255129|NELF|26012|nasal embryonic LHRH factor##AY255130|NELF|26012|nasal embryonic LHRH factor##AY255131|NELF|26012|nasal embryonic LHRH factor##AY255132|NELF|26012|nasal embryonic LHRH factor##NM_001130969|NELF|26012|nasal embryonic LHRH factor##NM_001130970|NELF|26012|nasal embryonic LHRH factor##NM_001130971|NELF|26012|nasal embryonic LHRH factor##NM_001178064|NELF|26012|nasal embryonic LHRH factor##NM_015537|NELF|26012|nasal embryonic LHRH factor##AK074602|NELF|26012|nasal embryonic LHRH factor##BC072412|NELF|26012|nasal embryonic LHRH factor##BC110498|NELF|26012|nasal embryonic LHRH factor##AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7##AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_032477|MRPL41|64975|mitochondrial ribosomal protein L41##BC040035|MRPL41|64975|mitochondrial ribosomal protein L41##AY232291|MRPL41|64975|mitochondrial ribosomal protein L41##AK307180|WDR85|92715|WD repeat domain 85##BC003123|WDR85|92715|WD repeat domain 85##BC016349|WDR85|92715|WD repeat domain 85##BC017335|WDR85|92715|WD repeat domain 85	0.062898	
chr17	28927141	28927250	reg1021938.p1	3.771	+	BC096718 BC098126 BC098273 NM_015594	-40612	+	TSC_hg19_v1_chr17_+_28804434 AK000606 AK291381 NM_001007024 NM_001007025 NM_004871 AK298714 AF047438 BC012620 AF073926 BC040471	-122762	+	AK316409 NM_001199775 AK302878	-219680	+	TSC_hg19_v1_chr17_+_29058664 BC047718	131493	+	TSC_hg19_v1_chr17_-_29151711 DQ298450 DQ892276 CU692798 AK296238 AF046059 BC023567	224480	-	TSC_hg19_v1_chr17_-_29151725 AK313315 NM_015986	224568	-	BC096718|TBC1D29|26083|TBC1 domain family, member 29##BC098126|TBC1D29|26083|TBC1 domain family, member 29##BC098273|TBC1D29|26083|TBC1 domain family, member 29##NM_015594|TBC1D29|26083|TBC1 domain family, member 29##AK000606|GOSR1|9527|golgi SNAP receptor complex member 1##AK291381|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007024|GOSR1|9527|golgi SNAP receptor complex member 1##NM_001007025|GOSR1|9527|golgi SNAP receptor complex member 1##NM_004871|GOSR1|9527|golgi SNAP receptor complex member 1##AK298714|GOSR1|9527|golgi SNAP receptor complex member 1##AF047438|GOSR1|9527|golgi SNAP receptor complex member 1##BC012620|GOSR1|9527|golgi SNAP receptor complex member 1##AF073926|GOSR1|9527|golgi SNAP receptor complex member 1##BC040471|GOSR1|9527|golgi SNAP receptor complex member 1##AK316409|CPD|1362|carboxypeptidase D##NM_001199775|CPD|1362|carboxypeptidase D##AK302878|CPD|1362|carboxypeptidase D##BC047718|SUZ12P|440423|suppressor of zeste 12 homolog pseudogene##DQ298450|CRLF3|51379|cytokine receptor-like factor 3##DQ892276|CRLF3|51379|cytokine receptor-like factor 3##AK296238|CRLF3|51379|cytokine receptor-like factor 3##AF046059|CRLF3|51379|cytokine receptor-like factor 3##BC023567|CRLF3|51379|cytokine receptor-like factor 3##AK313315|CRLF3|51379|cytokine receptor-like factor 3##NM_015986|CRLF3|51379|cytokine receptor-like factor 3	0.026154	
chr19	53039514	53039635	reg1036149.p2	3.771	+	CR749856 TSC_hg19_v1_chr19_+_53030941 NM_001039886	-8645	+	AB091373 AB091374 AK299106 NM_001099694 TSC_hg19_v1_chr19_+_52956836 AL833487 AB091376 AB091375	-82747	+	AB086839 AB086840 AB091368 AB091369 NM_001143938 NM_001143939	-104908	+	TSC_hg19_v1_chr19_+_53073539 NM_018260 AK001753 BC131719 BC136425 BC136426 BC054884 BC080612	33968	+	BC067346 NM_001172655	34342	+	TSC_hg19_v1_chr19_-_53141603 BC032867 AK027518 NM_001105549 NM_001105550 NM_001105551 NM_001105552 NM_001105553 NM_001105554 NM_018300	102050	-	CR749856|ZNF808|388558|zinc finger protein 808##NM_001039886|ZNF808|388558|zinc finger protein 808##AB091373|ZNF578|147660|zinc finger protein 578##AB091374|ZNF578|147660|zinc finger protein 578##AK299106|ZNF578|147660|zinc finger protein 578##NM_001099694|ZNF578|147660|zinc finger protein 578##AB091376|ZNF578|147660|zinc finger protein 578##AB091375|ZNF578|147660|zinc finger protein 578##AB086839|ZNF534|147658|zinc finger protein 534##AB086840|ZNF534|147658|zinc finger protein 534##NM_001143938|ZNF534|147658|zinc finger protein 534##NM_001143939|ZNF534|147658|zinc finger protein 534##NM_018260|ZNF701|55762|zinc finger protein 701##AK001753|ZNF701|55762|zinc finger protein 701##BC131719|ZNF701|55762|zinc finger protein 701##BC136425|ZNF701|55762|zinc finger protein 701##BC136426|ZNF701|55762|zinc finger protein 701##BC054884|ZNF701|55762|zinc finger protein 701##BC080612|ZNF701|55762|zinc finger protein 701##BC067346|ZNF701|55762|zinc finger protein 701##NM_001172655|ZNF701|55762|zinc finger protein 701##BC032867|ZNF83|55769|zinc finger protein 83##AK027518|ZNF83|55769|zinc finger protein 83##NM_001105549|ZNF83|55769|zinc finger protein 83##NM_001105550|ZNF83|55769|zinc finger protein 83##NM_001105551|ZNF83|55769|zinc finger protein 83##NM_001105552|ZNF83|55769|zinc finger protein 83##NM_001105553|ZNF83|55769|zinc finger protein 83##NM_001105554|ZNF83|55769|zinc finger protein 83##NM_018300|ZNF83|55769|zinc finger protein 83	0.0	
chr2	120144989	120145100	reg1029870.p1	3.771	+	M14200 NM_001079863 AM000001	-19847	+	FM213127 NM_001178017	-20216	+	TSC_hg19_v1_chr2_+_120124662 BC062996	-20385	+	TSC_hg19_v1_chr2_+_120189433 NM_183240	44366	+	AY462218 CU690190 AB527596 U20178 U28281 TSC_hg19_v1_chr2_-_120281970	136841	-	TSC_hg19_v1_chr2_-_120282018 AK314638 NM_002980	136975	-	M14200|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001079863|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##AM000001|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213127|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178017|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##BC062996|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_183240|TMEM37|140738|transmembrane protein 37##AY462218|SCTR|6344|secretin receptor##U20178|SCTR|6344|secretin receptor##U28281|SCTR|6344|secretin receptor##AK314638|SCTR|6344|secretin receptor##NM_002980|SCTR|6344|secretin receptor	0.016988	
chr2	74229594	74229704	reg1035008.p2	3.771	+	TSC_hg19_v1_chr2_+_74154019 X97386	-75603	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-75649	+	TSC_hg19_v1_chr2_+_74153968 NM_080916 NM_080918	-75699	+	NM_144993	43800	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	145369	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	145571	+	X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##NM_080916|DGUOK|1716|deoxyguanosine kinase##NM_080918|DGUOK|1716|deoxyguanosine kinase##NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.050492	
chr3	12598445	12598572	reg1035747.p1	3.771	+	NM_001195279	-11546	-	AK291183 TSC_hg19_v1_chr3_+_12526242	-72272	+	TSC_hg19_v1_chr3_+_12525987 AK074794 AK027821 NM_001145392 NM_001145395 NM_025265 BC004178 BC004211 BC019582 AK300449 AK295508	-72497	+	TSC_hg19_v1_chr3_+_12598585 AK091318 BC015715 AK298463 NM_014160 AF302084 DQ891095 DQ894277 CU677403	72	+	TSC_hg19_v1_chr3_-_12705590 X03484 AK312248	106959	-	TSC_hg19_v1_chr3_-_12705617 BC018119 AK226028 AK303561	107107	-	NM_001195279|LOC100129480|100129480|uncharacterized LOC100129480##AK291183|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK074794|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK027821|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_001145392|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_001145395|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_025265|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##BC004178|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##BC004211|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##BC019582|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK300449|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK295508|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK091318|MKRN2|23609|makorin ring finger protein 2##BC015715|MKRN2|23609|makorin ring finger protein 2##AK298463|MKRN2|23609|makorin ring finger protein 2##NM_014160|MKRN2|23609|makorin ring finger protein 2##AF302084|MKRN2|23609|makorin ring finger protein 2##DQ891095|MKRN2|23609|makorin ring finger protein 2##DQ894277|MKRN2|23609|makorin ring finger protein 2##X03484|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK312248|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##BC018119|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK226028|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1##AK303561|RAF1|5894|v-raf-1 murine leukemia viral oncogene homolog 1	0.0	
chr4	137990777	137990880	reg1037638.p1	3.771	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-2867910	-	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	-3917545	+	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	-3920372	+	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	462764	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	462814	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	1172536	-	NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	0.0	
chr7	144210593	144210692	reg1032792.p1	3.771	+	NM_001080413 AB528776	-103323	-	AK160365 TSC_hg19_v1_chr7_+_144052469 NM_005435 CR749203 BC136661	-158139	+	NM_001001802 NM_001005287	-195425	+	TSC_hg19_v1_chr7_-_144533086 AK091736	322447	-	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	322494	-	NM_014141	1602810	+	NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##AK160365|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_005435|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##CR749203|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##BC136661|ARHGEF5|7984|Rho guanine nucleotide exchange factor (GEF) 5##NM_001001802|OR2A42|402317|olfactory receptor, family 2, subfamily A, member 42##NM_001005287|OR2A1|346528|olfactory receptor, family 2, subfamily A, member 1##AK091736|TPK1|27010|thiamin pyrophosphokinase 1##AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##NM_014141|CNTNAP2|26047|contactin associated protein-like 2	0.562934	CTCF.p2:-31:0.563
chr9	109366618	109366685	reg1039517.p2	3.771	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-909733	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	-909798	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	-941894	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	258713	+	TSC_hg19_v1_chr9_+_109686439 CR749850	319818	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	678881	+	AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##CR749850|ZNF462|58499|zinc finger protein 462##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.0	
chr9	33167899	33168079	reg1031951.p2	3.771	+	NM_001497 TSC_hg19_v1_chr9_-_33167361	-628	-	TSC_hg19_v1_chr9_-_33167335 BC045773	-663	-	D29805 X13223 X14085 M22921 U10474 TSC_hg19_v1_chr9_-_33167262	-742	-	TSC_hg19_v1_chr9_+_33240166 AF048700 BC110068 NM_014471	72191	+	AM392568 BC014774 TSC_hg19_v1_chr9_-_33264707 AK096038 AK316577 AF116273 BC002407 AK222749 AF022224 U46917 BC001936 Z35491 NM_001172415 NM_004323	96619	-	NM_001195536 NM_016410 TSC_hg19_v1_chr9_+_33265035 BC016698 BC007457 AK315455 AK024753 BC018603 BC021168 AK295744	96967	+	NM_001497|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##BC045773|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##D29805|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X13223|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X14085|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##M22921|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##U10474|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AF048700|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##BC110068|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##NM_014471|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##AM392568|BAG1|573|BCL2-associated athanogene##BC014774|BAG1|573|BCL2-associated athanogene##AK096038|BAG1|573|BCL2-associated athanogene##AK316577|BAG1|573|BCL2-associated athanogene##AF116273|BAG1|573|BCL2-associated athanogene##AK222749|BAG1|573|BCL2-associated athanogene##AF022224|BAG1|573|BCL2-associated athanogene##U46917|BAG1|573|BCL2-associated athanogene##BC001936|BAG1|573|BCL2-associated athanogene##Z35491|BAG1|573|BCL2-associated athanogene##NM_001172415|BAG1|573|BCL2-associated athanogene##NM_004323|BAG1|573|BCL2-associated athanogene##NM_001195536|CHMP5|51510|charged multivesicular body protein 5##NM_016410|CHMP5|51510|charged multivesicular body protein 5##BC016698|CHMP5|51510|charged multivesicular body protein 5##BC007457|CHMP5|51510|charged multivesicular body protein 5##AK315455|CHMP5|51510|charged multivesicular body protein 5##AK024753|CHMP5|51510|charged multivesicular body protein 5##BC018603|CHMP5|51510|charged multivesicular body protein 5##BC021168|CHMP5|51510|charged multivesicular body protein 5##AK295744|CHMP5|51510|charged multivesicular body protein 5	0.0	
chrX	130875645	130875825	reg1015620.p3	3.771	+	BC137050 AB529233 NM_001004486	-197737	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-452323	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-452473	-	TSC_hg19_v1_chrX_-_130964633 AK097911	88916	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	281586	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	281905	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.0	
chr10	118986524	118986629	reg1036333.p1	3.770	+	AB087138 AB464053 NM_181840	-29577	+	AK127095 NM_001112704 NM_199131	-88765	-	NM_001127211 NM_018330 TSC_hg19_v1_chr10_-_118765131 AK091381 AX746947	-221464	-	NM_003054 BC030593 TSC_hg19_v1_chr10_+_119000626 AK314997 L23205 L09118 X71354 L14269 BC108927 BC108928	14074	+	CU688476 TSC_hg19_v1_chr10_-_119134939 BC012186 BC028375 NM_173791 AK091746 AX747159 BC033019	148305	-	AK123533 BC040186 TSC_hg19_v1_chr10_-_119301978 AY117413	315340	-	AB087138|KCNK18|338567|potassium channel, subfamily K, member 18##NM_181840|KCNK18|338567|potassium channel, subfamily K, member 18##AK127095|VAX1|11023|ventral anterior homeobox 1##NM_001112704|VAX1|11023|ventral anterior homeobox 1##NM_199131|VAX1|11023|ventral anterior homeobox 1##NM_001127211|KIAA1598|57698|KIAA1598##NM_018330|KIAA1598|57698|KIAA1598##AK091381|KIAA1598|57698|KIAA1598##NM_003054|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC030593|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##AK314997|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L23205|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L09118|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##X71354|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##L14269|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108927|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC108928|SLC18A2|6571|solute carrier family 18 (vesicular monoamine), member 2##BC012186|PDZD8|118987|PDZ domain containing 8##BC028375|PDZD8|118987|PDZ domain containing 8##NM_173791|PDZD8|118987|PDZ domain containing 8##AK091746|PDZD8|118987|PDZ domain containing 8##BC033019|PDZD8|118987|PDZ domain containing 8##AK123533|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##BC040186|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)##AY117413|EMX2OS|196047|EMX2 opposite strand/antisense RNA (non-protein coding)	0.0	
chr11	64511168	64511290	reg1018271.p3	3.770	+	TSC_hg19_v1_chr11_-_64510461 AK314637	-761	-	HQ258466 AB590919 TSC_hg19_v1_chr11_-_64510439	-833	-	TSC_hg19_v1_chr11_-_64490666 AB023138 BC150275 NM_015080 NM_138732	-20564	-	TSC_hg19_v1_chr11_-_64511625 AF081194 U78170 AK122694 NM_001098671	364	-	TSC_hg19_v1_chr11_-_64512344 BC110306 NM_001098670	1081	-	BC117151 AF043722 AF043723 NM_153819 Y12336	1697	-	AK314637|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##HQ258466|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AB023138|NRXN2|9379|neurexin 2##BC150275|NRXN2|9379|neurexin 2##NM_015080|NRXN2|9379|neurexin 2##NM_138732|NRXN2|9379|neurexin 2##AF081194|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##U78170|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AK122694|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##NM_001098671|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##BC110306|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##NM_001098670|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##BC117151|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AF043722|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##AF043723|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##NM_153819|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)##Y12336|RASGRP2|10235|RAS guanyl releasing protein 2 (calcium and DAG-regulated)	0.918803	CTCF.p2:-17:0.919
chr12	111100838	111100934	reg1040441.p1	3.770	+	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	-48961	+	AK124744 TSC_hg19_v1_chr12_-_111021124	-79760	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	-79816	-	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	26072	-	AK293543 NM_001040107	26713	-	L07395 AK297882 AB590512 EU831993 EU832086 TSC_hg19_v1_chr12_-_111180593	79660	-	AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1##L07395|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK297882|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU831993|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU832086|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme	0.0	
chr1	45986517	45986697	reg1035865.p1	3.770	+	AK098537 NM_015506 TSC_hg19_v1_chr1_+_45965990 AL080062 BC006122	-20668	+	TSC_hg19_v1_chr1_-_45956836 BX648441 AK027573 AK294172 BC022194 AB057597 AJ132545 AK299269 NM_007170 AK302494	-29774	-	TSC_hg19_v1_chr1_+_45805883 AK298162 AK093320 BC009364 CU679325 CR457320	-180707	+	X67951 L19184 TSC_hg19_v1_chr1_-_45987557 AK311898 BC007063 AK131049 BC021683 NM_002574 NM_181696 NM_181697	971	-	NM_001202431	1954	-	NM_001202413 NM_001202414 NM_006066 NM_153326 TSC_hg19_v1_chr1_+_46016497 AK311175 AK307068	29881	+	AK098537|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##NM_015506|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##AL080062|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BC006122|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BX648441|TESK2|10420|testis-specific kinase 2##AK027573|TESK2|10420|testis-specific kinase 2##AK294172|TESK2|10420|testis-specific kinase 2##BC022194|TESK2|10420|testis-specific kinase 2##AB057597|TESK2|10420|testis-specific kinase 2##AJ132545|TESK2|10420|testis-specific kinase 2##AK299269|TESK2|10420|testis-specific kinase 2##NM_007170|TESK2|10420|testis-specific kinase 2##AK302494|TESK2|10420|testis-specific kinase 2##AK298162|TOE1|114034|target of EGR1, member 1 (nuclear)##AK093320|TOE1|114034|target of EGR1, member 1 (nuclear)##BC009364|TOE1|114034|target of EGR1, member 1 (nuclear)##CR457320|TOE1|114034|target of EGR1, member 1 (nuclear)##X67951|PRDX1|5052|peroxiredoxin 1##L19184|PRDX1|5052|peroxiredoxin 1##AK311898|PRDX1|5052|peroxiredoxin 1##BC007063|PRDX1|5052|peroxiredoxin 1##AK131049|PRDX1|5052|peroxiredoxin 1##BC021683|PRDX1|5052|peroxiredoxin 1##NM_002574|PRDX1|5052|peroxiredoxin 1##NM_181696|PRDX1|5052|peroxiredoxin 1##NM_181697|PRDX1|5052|peroxiredoxin 1##NM_001202431|PRDX1|5052|peroxiredoxin 1##NM_001202413|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_001202414|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_006066|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_153326|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307068|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	0.0	
chr16	12066046	12066157	reg1042244.p1	3.770	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-7017	+	NM_001130007	-55583	-	TSC_hg19_v1_chr16_-_12009919 AK315267	-56173	-	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	4472	+	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	831550	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	831618	-	NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AK315267|GSPT1|2935|G1 to S phase transition 1##AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1	0.920603	CTCF.p2:-6:0.921
chr17	3868490	3868594	reg1027943.p1	3.770	+	AB462957 DQ893317 EU176809 Z69881 TSC_hg19_v1_chr17_-_3867744 AF068220 BC035729 AK292716 NM_005173 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958	-841	-	NM_002558	-48583	-	X83688 U45448 BC044657 BC027949 TSC_hg19_v1_chr17_-_3819762 AK310981 AK313264 AF020498	-48794	-	AB384472 TSC_hg19_v1_chr17_-_4046240	177673	-	TSC_hg19_v1_chr17_-_4046246 AB007859 BC151836 NM_015113	177710	-	TSC_hg19_v1_chr17_-_4046308 AK127482	177768	-	DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_002558|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##X83688|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##U45448|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC044657|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC027949|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AK313264|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AF020498|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	0.010501	
chr19	29124778	29124873	reg1033769.p2	3.770	+	TSC_hg19_v1_chr19_+_28284946 AK095009	-839897	+	TSC_hg19_v1_chr19_-_28284831 AK311452	-839992	-	TSC_hg19_v1_chr19_+_28284377 BC024732	-840437	+	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	579235	-	TSC_hg19_v1_chr19_-_29704107 NM_006003	579296	-	NM_001146339	892665	+	AK311452|LOC148189|148189|uncharacterized LOC148189##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B	0.997641	CTCF.p2:3:0.998
chr2	125567834	125567970	reg1036727.p2	3.770	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-785038	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-3054665	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-3073437	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	1845805	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	1845890	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	2296839	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.0	
chr6	160400108	160400288	reg1026792.p2	3.770	+	TSC_hg19_v1_chr6_+_160390137 NM_000876 Y00285 J03528	-10065	+	BC069142 BC069581 BC110454 NM_002377 CU686912 CR542261	-72219	+	TSC_hg19_v1_chr6_+_160221313 AK097559 NM_173516 AK093139 AX747947 BC112246	-178855	+	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	142716	+	CU689064 BC039899 AK290787 X98333 AB075951 BC030978 NM_003058	279677	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	369196	+	NM_000876|IGF2R|3482|insulin-like growth factor 2 receptor##Y00285|IGF2R|3482|insulin-like growth factor 2 receptor##J03528|IGF2R|3482|insulin-like growth factor 2 receptor##BC069142|MAS1|4142|MAS1 oncogene##BC069581|MAS1|4142|MAS1 oncogene##BC110454|MAS1|4142|MAS1 oncogene##NM_002377|MAS1|4142|MAS1 oncogene##CR542261|MAS1|4142|MAS1 oncogene##AK097559|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_173516|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##AK093139|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##BC112246|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC039899|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AK290787|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##X98333|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AB075951|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC030978|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003058|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3	0.0	
chrX	134572472	134572563	reg1038297.p1	3.770	+	BC030620 TSC_hg19_v1_chrX_+_134555878 BC051704	-16643	+	AY927530 NM_152695 TSC_hg19_v1_chrX_+_134478720 AK314344 AK074194 AL833407 AY280801 BC060768 BC065938 AL833109	-93793	+	TSC_hg19_v1_chrX_-_134478038 AL831984 BC029787	-94514	-	TSC_hg19_v1_chrX_+_134654584 BX648113 NM_182540 AK096544 AL833319	82052	+	TSC_hg19_v1_chrX_+_134654737 BC140715 AK308423	82214	+	AY743709 NM_001017417 BC140735 BC140926 BC144437 BC140913	274717	+	BC030620|LINC00086|399668|long intergenic non-protein coding RNA 86##BC051704|LINC00086|399668|long intergenic non-protein coding RNA 86##AY927530|ZNF449|203523|zinc finger protein 449##NM_152695|ZNF449|203523|zinc finger protein 449##AK314344|ZNF449|203523|zinc finger protein 449##AK074194|ZNF449|203523|zinc finger protein 449##AL833407|ZNF449|203523|zinc finger protein 449##AY280801|ZNF449|203523|zinc finger protein 449##BC060768|ZNF449|203523|zinc finger protein 449##BC065938|ZNF449|203523|zinc finger protein 449##AL833109|ZNF449|203523|zinc finger protein 449##AL831984|ZNF75D|7626|zinc finger protein 75D##BC029787|ZNF75D|7626|zinc finger protein 75D##BX648113|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##NM_182540|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK096544|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AL833319|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##BC140715|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AK308423|DDX26B|203522|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B##AY743709|CT45A1|541466|cancer/testis antigen family 45, member A1##NM_001017417|CT45A1|541466|cancer/testis antigen family 45, member A1##BC140735|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140926|CT45A3|441519|cancer/testis antigen family 45, member A3##BC144437|CT45A3|441519|cancer/testis antigen family 45, member A3##BC140913|CT45A1|541466|cancer/testis antigen family 45, member A1	0.61908	CTCF.p2:6:0.619
chr11	47182527	47182708	reg1010612.p1	3.769	+	TSC_hg19_v1_chr11_+_46958328 AK316318 NM_001003676 NM_001003677 NM_001003678 NM_024113 AK315639 BC001860 BC009455 AL136575 BC052291 BC013988 AK300813 AK025863 AK293609 AB528079 AM393584 AM393807 CR457351 CU679361 CU680726	-224325	+	TSC_hg19_v1_chr11_-_46940102 AB384531 AB231861 BC136667 BC136668 AB084910 NM_002334 BC110808	-242555	-	TSC_hg19_v1_chr11_-_46867841 NM_001008938 NM_014756	-314764	-	AK301785 AL834337 EU832352 EU832437 AK300347 BC036823 AK027482 TSC_hg19_v1_chr11_-_47198413 AK304541 BC030148	15782	-	TSC_hg19_v1_chr11_-_47198431 AK315992 AK098324	15816	-	NM_001242832 NM_032389	16058	-	AK316318|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003676|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003677|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003678|C11orf49|79096|chromosome 11 open reading frame 49##NM_024113|C11orf49|79096|chromosome 11 open reading frame 49##AK315639|C11orf49|79096|chromosome 11 open reading frame 49##BC001860|C11orf49|79096|chromosome 11 open reading frame 49##BC009455|C11orf49|79096|chromosome 11 open reading frame 49##AL136575|C11orf49|79096|chromosome 11 open reading frame 49##BC052291|C11orf49|79096|chromosome 11 open reading frame 49##BC013988|C11orf49|79096|chromosome 11 open reading frame 49##AK300813|C11orf49|79096|chromosome 11 open reading frame 49##AK025863|C11orf49|79096|chromosome 11 open reading frame 49##AK293609|C11orf49|79096|chromosome 11 open reading frame 49##AM393584|C11orf49|79096|chromosome 11 open reading frame 49##AM393807|C11orf49|79096|chromosome 11 open reading frame 49##CR457351|C11orf49|79096|chromosome 11 open reading frame 49##AB231861|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136667|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136668|LRP4|4038|low density lipoprotein receptor-related protein 4##AB084910|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_002334|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_001008938|CKAP5|9793|cytoskeleton associated protein 5##NM_014756|CKAP5|9793|cytoskeleton associated protein 5##AK301785|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AL834337|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832352|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832437|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300347|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC036823|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK027482|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK304541|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC030148|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK315992|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK098324|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_001242832|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_032389|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2	0.0	
chr12	131303347	131303528	reg1008169.p1	3.769	+	TSC_hg19_v1_chr12_-_131200818 BC007632	-102612	-	AB002316 NM_015347	-301028	-	TSC_hg19_v1_chr12_+_130822635 BC028581 AF387507 AF104260 AK093133 AX747944	-480815	+	TSC_hg19_v1_chr12_-_131323796 D14582 BC047496 NM_001980 NM_194356	20316	-	TSC_hg19_v1_chr12_+_131356615 AF054183 AK311223 AK316193 AK312466 BC000852 NM_006325	53149	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	53188	+	BC007632|RIMBP2|23504|RIMS binding protein 2##AB002316|RIMBP2|23504|RIMS binding protein 2##NM_015347|RIMBP2|23504|RIMS binding protein 2##BC028581|PIWIL1|9271|piwi-like 1 (Drosophila)##AF387507|PIWIL1|9271|piwi-like 1 (Drosophila)##AF104260|PIWIL1|9271|piwi-like 1 (Drosophila)##AK093133|PIWIL1|9271|piwi-like 1 (Drosophila)##D14582|STX2|2054|syntaxin 2##BC047496|STX2|2054|syntaxin 2##NM_001980|STX2|2054|syntaxin 2##NM_194356|STX2|2054|syntaxin 2##AF054183|RAN|5901|RAN, member RAS oncogene family##AK316193|RAN|5901|RAN, member RAS oncogene family##AK312466|RAN|5901|RAN, member RAS oncogene family##BC000852|RAN|5901|RAN, member RAS oncogene family##NM_006325|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family	0.293752	CTCF.p2:-35:0.294
chr12	46662416	46662488	reg1039903.p1	3.769	+	AK074851 CU679761 DQ891017 EU176550 AK074949 AK313731 TSC_hg19_v1_chr12_-_46633674	-28839	-	TSC_hg19_v1_chr12_-_46385857 AK026473	-276577	-	TSC_hg19_v1_chr12_-_46384378 NM_004719	-278027	-	TSC_hg19_v1_chr12_-_46662567 AF247166	114	-	TSC_hg19_v1_chr12_-_46662776 BC010620 BX648676	291	-	BX647547 TSC_hg19_v1_chr12_-_46662796 AK225639 AF271070 BX648495 AK225778 AK308129	366	-	AK074851|SLC38A1|81539|solute carrier family 38, member 1##DQ891017|SLC38A1|81539|solute carrier family 38, member 1##EU176550|SLC38A1|81539|solute carrier family 38, member 1##AK074949|SLC38A1|81539|solute carrier family 38, member 1##AK313731|SLC38A1|81539|solute carrier family 38, member 1##AK026473|SCAF11|9169|SR-related CTD-associated factor 11##NM_004719|SCAF11|9169|SR-related CTD-associated factor 11##AF247166|SLC38A1|81539|solute carrier family 38, member 1##BC010620|SLC38A1|81539|solute carrier family 38, member 1##BX648676|SLC38A1|81539|solute carrier family 38, member 1##BX647547|SLC38A1|81539|solute carrier family 38, member 1##AK225639|SLC38A1|81539|solute carrier family 38, member 1##AF271070|SLC38A1|81539|solute carrier family 38, member 1##BX648495|SLC38A1|81539|solute carrier family 38, member 1##AK225778|SLC38A1|81539|solute carrier family 38, member 1##AK308129|SLC38A1|81539|solute carrier family 38, member 1	0.0	
chr13	46015871	46016002	reg1036741.p1	3.769	+	TSC_hg19_v1_chr13_-_45992486 BC132739 BC136760 BC144401 AK094133 AK095465 AK302967 NM_001010875	-23442	-	TSC_hg19_v1_chr13_-_45992456 BC129808	-23476	-	AF318337 TSC_hg19_v1_chr13_+_45915726 AK124332	-100323	+	TSC_hg19_v1_chr13_+_46039081 NM_031431 AF349676 AF332595 AK026305 AK225466 AK225952 BX648211 AK294959 AK304248 AK314387 BC038953 CU691622	23161	+	BC131494 AK057244 NM_182542	173929	-	AK093129 AX747942 NM_152719	260509	+	BC132739|SLC25A30|253512|solute carrier family 25, member 30##BC136760|SLC25A30|253512|solute carrier family 25, member 30##BC144401|SLC25A30|253512|solute carrier family 25, member 30##AK094133|SLC25A30|253512|solute carrier family 25, member 30##AK095465|SLC25A30|253512|solute carrier family 25, member 30##AK302967|SLC25A30|253512|solute carrier family 25, member 30##NM_001010875|SLC25A30|253512|solute carrier family 25, member 30##BC129808|SLC25A30|253512|solute carrier family 25, member 30##AF318337|LOC100190939|100190939|uncharacterized LOC100190939##AK124332|LOC100190939|100190939|uncharacterized LOC100190939##NM_031431|COG3|83548|component of oligomeric golgi complex 3##AF349676|COG3|83548|component of oligomeric golgi complex 3##AF332595|COG3|83548|component of oligomeric golgi complex 3##AK026305|COG3|83548|component of oligomeric golgi complex 3##AK225466|COG3|83548|component of oligomeric golgi complex 3##AK225952|COG3|83548|component of oligomeric golgi complex 3##BX648211|COG3|83548|component of oligomeric golgi complex 3##AK294959|COG3|83548|component of oligomeric golgi complex 3##AK304248|COG3|83548|component of oligomeric golgi complex 3##AK314387|COG3|83548|component of oligomeric golgi complex 3##BC038953|COG3|83548|component of oligomeric golgi complex 3##BC131494|FAM194B|220081|family with sequence similarity 194, member B##AK057244|FAM194B|220081|family with sequence similarity 194, member B##NM_182542|FAM194B|220081|family with sequence similarity 194, member B##AK093129|SPERT|220082|spermatid associated##NM_152719|SPERT|220082|spermatid associated	0.0	
chr14	105030208	105030388	reg1000317.p1	3.769	+	TSC_hg19_v1_chr14_+_104605441 AB033062	-424846	+	NM_015656	-425239	+	AX781433 BX247999 NM_001080464 AX721044 BC035836 BC136637 AX781428 AX781429 AX781430 AX781431 AX781435	-478237	+	AK095913 NM_001008404 AK297818 AK309489 BC041103	15788	+	AB464314 AK124477 NM_207379	40790	-	TSC_hg19_v1_chr14_+_105147469 BC035345	117164	+	AB033062|KIF26A|26153|kinesin family member 26A##NM_015656|KIF26A|26153|kinesin family member 26A##AX781433|ASPG|374569|asparaginase homolog (S. cerevisiae)##BX247999|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_001080464|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC035836|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC136637|ASPG|374569|asparaginase homolog (S. cerevisiae)##AX781435|ASPG|374569|asparaginase homolog (S. cerevisiae)##AK095913|C14orf180|400258|chromosome 14 open reading frame 180##NM_001008404|C14orf180|400258|chromosome 14 open reading frame 180##AK297818|C14orf180|400258|chromosome 14 open reading frame 180##AK309489|C14orf180|400258|chromosome 14 open reading frame 180##BC041103|C14orf180|400258|chromosome 14 open reading frame 180##AK124477|TMEM179|388021|transmembrane protein 179##NM_207379|TMEM179|388021|transmembrane protein 179	0.0	
chr15	25381399	25381491	reg1033817.p1	3.769	+	AB061718 TSC_hg19_v1_chr15_+_25281192	-100296	+	AF019618 TSC_hg19_v1_chr15_+_25230248	-151221	+	TSC_hg19_v1_chr15_+_25227141 AF319524	-154298	+	L07557 NM_130838	269204	-	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	302656	-	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	302733	-	AB061718|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N##AF019618|PAR5|8123|Prader-Willi/Angelman syndrome-5##AF319524|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N##L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A	0.68269	CTCF.p2:2:0.683
chr15	83318736	83318829	reg1036488.p1	3.769	+	CU690752 BC050629 NM_030594	-2108	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	-78247	-	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	-109546	-	AK097827 TSC_hg19_v1_chr15_-_83349166	30372	-	AF022152 U37673 TSC_hg19_v1_chr15_-_83378628 BC093739 BC143342 BC143346 BC035640 BC008350 BC026700 AK294331 NM_004644	59830	-	TSC_hg19_v1_chr15_-_83419208 BC041394	100417	-	BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##AK097827|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##AF022152|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##U37673|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC093739|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC143342|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC143346|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC035640|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC008350|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC026700|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##AK294331|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##NM_004644|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit	0.0	
chr16	11009655	11009793	reg1032752.p1	3.769	+	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	-38612	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	-97176	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-172020	+	BC071683 TSC_hg19_v1_chr16_-_11036171	26442	-	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	26511	-	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	28719	+	AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##BC071683|DEXI|28955|Dexi homolog (mouse)##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A	0.0	
chr19	42210873	42211051	reg1023398.p2	3.769	+	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	-18810	-	D90276 AK298701 NM_001817	-77528	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	-128385	+	TSC_hg19_v1_chr19_+_42212531 NM_004363	1566	+	TSC_hg19_v1_chr19_+_42212544 M29540 AK310844 BC034671 AK223101	1589	+	TSC_hg19_v1_chr19_+_42212619 CR749337 DQ890840 DQ896753 CU689928 M15042 X16455	1674	+	AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_004363|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M29540|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK310844|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##BC034671|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AK223101|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##CR749337|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ890840|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ896753|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M15042|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##X16455|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5	1.05282	CTCF.p2:13:0.996
chr5	176816782	176816962	reg1002792.p2	3.769	+	AK096088 NM_001167579 NM_003052 TSC_hg19_v1_chr5_+_176811434 AK298299 BC053349 BC035294 BC050385 L13258	-5430	+	TSC_hg19_v1_chr5_+_176794314 AK098150	-22559	+	TSC_hg19_v1_chr5_+_176784947 AB590533	-31887	+	BC132952 BC132954 NM_001029886	10764	-	TSC_hg19_v1_chr5_-_176831183 BT007350	14353	-	BC012390 TSC_hg19_v1_chr5_-_176831506	14588	-	AK096088|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_001167579|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_003052|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK298299|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC053349|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC035294|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC050385|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##L13258|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK098150|RGS14|10636|regulator of G-protein signaling 14##BC132952|PFN3|345456|profilin 3##BC132954|PFN3|345456|profilin 3##NM_001029886|PFN3|345456|profilin 3##BT007350|F12|2161|coagulation factor XII (Hageman factor)##BC012390|F12|2161|coagulation factor XII (Hageman factor)	0.0	
chr9	37921536	37921603	reg1045548.p1	3.769	+	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	-17203	-	AK091407 AX746962 TSC_hg19_v1_chr9_-_37904125 BC008500 BC063563	-17440	-	TSC_hg19_v1_chr9_+_37800815 BC108686	-120761	+	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	147572	-	X75342 NM_003028 TSC_hg19_v1_chr9_-_38069225 BC094765	147672	-	TSC_hg19_v1_chr9_+_38392669 NM_000692	471104	+	AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##AK091407|MCART1|92014|mitochondrial carrier triple repeat 1##BC008500|MCART1|92014|mitochondrial carrier triple repeat 1##BC063563|MCART1|92014|mitochondrial carrier triple repeat 1##BC108686|DCAF10|79269|DDB1 and CUL4 associated factor 10##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B##X75342|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_003028|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1	0.0	
chr10	102632653	102632719	reg1011157.p2	3.768	+	TSC_hg19_v1_chr10_+_102505338 L25597 M89470 NM_000278 NM_003987 NM_003988 NM_003989 NM_003990	-127284	+	TSC_hg19_v1_chr10_+_102295705 AF395830 BC007719 AB528628 DQ892767 DQ896013	-336928	+	TSC_hg19_v1_chr10_+_102295696 AK295353 NM_017902 AK000622	-337051	+	AF460991 AF460992 NM_001136123 NM_001243770 NM_018121	39639	+	TSC_hg19_v1_chr10_+_102672719 AK292565 AL832343 AL833126 BC015131 BC047715 BC030565 BC064526 BC020915 BC073832 AL832383 AB385255	40089	+	TSC_hg19_v1_chr10_+_102729286 BC051030 AK297431	96590	+	L25597|PAX2|5076|paired box 2##M89470|PAX2|5076|paired box 2##NM_000278|PAX2|5076|paired box 2##NM_003987|PAX2|5076|paired box 2##NM_003988|PAX2|5076|paired box 2##NM_003989|PAX2|5076|paired box 2##NM_003990|PAX2|5076|paired box 2##AF395830|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##BC007719|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ892767|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##DQ896013|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK295353|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##NM_017902|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AK000622|HIF1AN|55662|hypoxia inducible factor 1, alpha subunit inhibitor##AF460991|FAM178A|55719|family with sequence similarity 178, member A##AF460992|FAM178A|55719|family with sequence similarity 178, member A##NM_001136123|FAM178A|55719|family with sequence similarity 178, member A##NM_001243770|FAM178A|55719|family with sequence similarity 178, member A##NM_018121|FAM178A|55719|family with sequence similarity 178, member A##AK292565|FAM178A|55719|family with sequence similarity 178, member A##AL832343|FAM178A|55719|family with sequence similarity 178, member A##AL833126|FAM178A|55719|family with sequence similarity 178, member A##BC015131|FAM178A|55719|family with sequence similarity 178, member A##BC047715|FAM178A|55719|family with sequence similarity 178, member A##BC030565|FAM178A|55719|family with sequence similarity 178, member A##BC064526|FAM178A|55719|family with sequence similarity 178, member A##BC020915|FAM178A|55719|family with sequence similarity 178, member A##BC073832|FAM178A|55719|family with sequence similarity 178, member A##AL832383|FAM178A|55719|family with sequence similarity 178, member A##BC051030|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G##AK297431|SEMA4G|57715|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G	0.0	
chr10	7452996	7453114	reg1032777.p1	3.768	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	-1805	-	TSC_hg19_v1_chr10_+_6622460 AY007155	-830575	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	-830794	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	379	-	AK027849 TSC_hg19_v1_chr10_-_7659249	206162	-	BC004282 NM_032817	208569	-	AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##AY007155|LOC439949|439949|uncharacterized LOC439949##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC004282|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_032817|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.0	
chr11	116228930	116229028	reg1030146.p2	3.768	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-853799	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-1140331	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1679731	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	414719	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	429736	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	429759	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.314762	CTCF.p2:-26:0.315
chr1	1550826	1551006	reg1026555.p2	3.768	+	NM_001170686 NM_001170687 NM_001170688 NM_080875 AK302757 AK128553 TSC_hg19_v1_chr1_+_1550895 BC037542 AK122751 AB074480 AB076691 AB076692 AB076693 AK122863 AK123400 BC016490 AB097000	-60	+	TSC_hg19_v1_chr1_-_1535470 AB188495 NM_001242659	-15443	-	TSC_hg19_v1_chr1_-_1510268 NM_014188	-40644	-	TSC_hg19_v1_chr1_-_1551178 BC035078	205	-	TSC_hg19_v1_chr1_+_1551275 NM_001170689 AK128167 BC035109 AK098785	384	+	AK297700 AB010962 AJ005256 NM_006983 BC025719 AB010961 AF056200	16654	+	NM_001170686|MIB2|142678|mindbomb homolog 2 (Drosophila)##NM_001170687|MIB2|142678|mindbomb homolog 2 (Drosophila)##NM_001170688|MIB2|142678|mindbomb homolog 2 (Drosophila)##NM_080875|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK302757|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK128553|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC037542|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK122751|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB074480|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB076691|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB076692|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB076693|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK122863|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK123400|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC016490|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB097000|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB188495|LOC643988|643988|uncharacterized LOC643988##NM_001242659|LOC643988|643988|uncharacterized LOC643988##NM_014188|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)##BC035078|MIB2|142678|mindbomb homolog 2 (Drosophila)##NM_001170689|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK128167|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC035109|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK098785|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK297700|MMP23B|8510|matrix metallopeptidase 23B##AB010962|MMP23B|8510|matrix metallopeptidase 23B##AJ005256|MMP23B|8510|matrix metallopeptidase 23B##NM_006983|MMP23B|8510|matrix metallopeptidase 23B##BC025719|MMP23B|8510|matrix metallopeptidase 23B##AB010961|MMP23B|8510|matrix metallopeptidase 23B##AF056200|MMP23B|8510|matrix metallopeptidase 23B	0.0	
chr11	64993498	64993636	reg1011251.p2	3.768	+	AK131327 NM_001004326 BC146850	-12253	+	TSC_hg19_v1_chr11_+_64949413 BC017200	-44128	+	TSC_hg19_v1_chr11_+_64949398 AK301538	-44166	+	TSC_hg19_v1_chr11_+_65029432 AK309284 BC001347 BC002990 BC018813 BC018814 NM_002689 AK297842 AK307831 AK025315	35839	+	NM_006779 TSC_hg19_v1_chr11_+_65082336 AF001436 AF163840 AK315444 BC075834	88770	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	107717	+	AK131327|SLC22A20|440044|solute carrier family 22, member 20##NM_001004326|SLC22A20|440044|solute carrier family 22, member 20##BC146850|SLC22A20|440044|solute carrier family 22, member 20##BC017200|CAPN1|823|calpain 1, (mu/I) large subunit##AK301538|CAPN1|823|calpain 1, (mu/I) large subunit##AK309284|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC001347|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC002990|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018813|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018814|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_002689|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK297842|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK307831|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK025315|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_006779|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF001436|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF163840|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AK315444|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##BC075834|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2	0.0	
chr13	66187284	66187381	reg1032517.p1	3.768	+	AK289924 NM_022843	-4197678	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-4198079	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-5215853	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	1617172	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	4495209	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	6252927	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.14587	
chr17	70030233	70030362	reg1037974.p2	3.768	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-1864601	+	BC033038 NM_170742	-1929303	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-1958867	+	TSC_hg19_v1_chr17_-_70116937 AL833139	86641	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	86862	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	86873	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.0	
chr18	24585699	24585814	reg1033116.p2	3.768	+	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	-140040	-	U63623 NM_004028	-143202	-	AF542549 NM_198991	-365449	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	137123	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	179477	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	1171281	-	AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##U63623|AQP4|361|aquaporin 4##NM_004028|AQP4|361|aquaporin 4##AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	0.158742	
chr19	13972980	13973161	reg1004708.p2	3.768	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	-25968	-	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-66825	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-87786	+	BC101209 BC101210 NM_001098622	14992	+	AK097431 NM_024323	43838	-	NM_017721 TSC_hg19_v1_chr19_+_14017006	43910	+	AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57##NM_017721|CC2D1A|54862|coiled-coil and C2 domain containing 1A	0.0	
chr2	3098284	3098373	reg1035282.p2	3.768	+	TSC_hg19_v1_chr2_-_2335085 AK307797	-763244	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	-763363	-	BC031690 TSC_hg19_v1_chr2_-_1946938	-1151422	-	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	283228	-	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	285177	+	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	424970	-	AK307797|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1	0.0	
chr2	62636822	62636905	reg1005737.p3	3.768	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-213597	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-504034	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-521077	-	BC047439 AK091902 AX747245 NM_198276	96676	-	AK292545 NM_001142615	264122	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	296103	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr6	43767860	43767948	reg1036201.p2	3.768	+	TSC_hg19_v1_chr6_+_43738771 M27281 M32977 AY047581 X62568 EU832814 GQ129408 CU688060 AB021221 AB451322 AB451451 AF091352 AF214570 AF430806 AF486837 AJ010438 AY263145 AY500353 AY766116 DQ229900	-29034	+	TSC_hg19_v1_chr6_+_43738511 BC011177 BC065522	-29370	+	TSC_hg19_v1_chr6_+_43738284 AF022375	-29657	+	TSC_hg19_v1_chr6_+_43968321 BC029071 NM_001171992 NM_153246 BC032706 GQ129376 GQ129377	200470	+	CR627460 TSC_hg19_v1_chr6_+_44094741	326794	+	TSC_hg19_v1_chr6_-_44095161 AK312086	327256	-	M27281|VEGFA|7422|vascular endothelial growth factor A##M32977|VEGFA|7422|vascular endothelial growth factor A##AY047581|VEGFA|7422|vascular endothelial growth factor A##X62568|VEGFA|7422|vascular endothelial growth factor A##EU832814|VEGFA|7422|vascular endothelial growth factor A##GQ129408|VEGFA|7422|vascular endothelial growth factor A##AB021221|VEGFA|7422|vascular endothelial growth factor A##AB451322|VEGFA|7422|vascular endothelial growth factor A##AB451451|VEGFA|7422|vascular endothelial growth factor A##AF091352|VEGFA|7422|vascular endothelial growth factor A##AF214570|VEGFA|7422|vascular endothelial growth factor A##AF430806|VEGFA|7422|vascular endothelial growth factor A##AF486837|VEGFA|7422|vascular endothelial growth factor A##AJ010438|VEGFA|7422|vascular endothelial growth factor A##AY263145|VEGFA|7422|vascular endothelial growth factor A##AY500353|VEGFA|7422|vascular endothelial growth factor A##AY766116|VEGFA|7422|vascular endothelial growth factor A##DQ229900|VEGFA|7422|vascular endothelial growth factor A##BC011177|VEGFA|7422|vascular endothelial growth factor A##BC065522|VEGFA|7422|vascular endothelial growth factor A##AF022375|VEGFA|7422|vascular endothelial growth factor A##BC029071|C6orf223|221416|chromosome 6 open reading frame 223##NM_001171992|C6orf223|221416|chromosome 6 open reading frame 223##NM_153246|C6orf223|221416|chromosome 6 open reading frame 223##BC032706|C6orf223|221416|chromosome 6 open reading frame 223##GQ129376|C6orf223|221416|chromosome 6 open reading frame 223##GQ129377|C6orf223|221416|chromosome 6 open reading frame 223##CR627460|TMEM63B|55362|transmembrane protein 63B##AK312086|MRPL14|64928|mitochondrial ribosomal protein L14	0.0	
chr6	76477890	76477956	reg1039407.p2	3.768	+	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-18914	+	TSC_hg19_v1_chr6_+_76458926 NM_004999 BX647397 BC012598	-19007	+	AF307849 AB018340 TSC_hg19_v1_chr6_+_76312226 AF306508 AF196304	-165715	+	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	304376	-	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	1695226	-	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	3099332	+	AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_004999|MYO6|4646|myosin VI##BX647397|MYO6|4646|myosin VI##BC012598|MYO6|4646|myosin VI##AF307849|SENP6|26054|SUMO1/sentrin specific peptidase 6##AB018340|SENP6|26054|SUMO1/sentrin specific peptidase 6##AF306508|SENP6|26054|SUMO1/sentrin specific peptidase 6##AF196304|SENP6|26054|SUMO1/sentrin specific peptidase 6##HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1	0.0	
chr7	120954169	120954349	reg1028160.p1	3.768	+	AK025639 AK225313 TSC_hg19_v1_chr7_+_120702920	-251386	+	NM_001105533	-324815	+	TSC_hg19_v1_chr7_+_120628867 AL832638	-325363	+	AF152584 NM_016087	11161	+	AF169963 NM_057168	14830	+	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	82078	-	AK025639|C7orf58|79974|chromosome 7 open reading frame 58##AK225313|C7orf58|79974|chromosome 7 open reading frame 58##NM_001105533|C7orf58|79974|chromosome 7 open reading frame 58##AL832638|C7orf58|79974|chromosome 7 open reading frame 58##AF152584|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_016087|WNT16|51384|wingless-type MMTV integration site family, member 16##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C	0.0	
chr9	139001609	139001782	reg1024385.p1	3.768	+	TSC_hg19_v1_chr9_-_138987136 BC015649 AK129748 NM_144653	-14560	-	TSC_hg19_v1_chr9_-_138853220 AF176796 BC004967 NM_016172	-148492	-	CU678830 DQ892567 DQ895782 TSC_hg19_v1_chr9_-_138853062 BC011822	-148656	-	BC092490 BC111053 TSC_hg19_v1_chr9_-_139010485	8740	-	BC014304 BC013282 TSC_hg19_v1_chr9_-_139010700 AK023162 AK091349 AX746927 BC021231	8975	-	TSC_hg19_v1_chr9_-_139010722 NM_152833	9034	-	BC015649|NACC2|138151|NACC family member 2, BEN and BTB (POZ) domain containing##NM_144653|NACC2|138151|NACC family member 2, BEN and BTB (POZ) domain containing##AF176796|UBAC1|10422|UBA domain containing 1##BC004967|UBAC1|10422|UBA domain containing 1##NM_016172|UBAC1|10422|UBA domain containing 1##DQ892567|UBAC1|10422|UBA domain containing 1##DQ895782|UBAC1|10422|UBA domain containing 1##BC011822|UBAC1|10422|UBA domain containing 1##BC092490|C9orf69|90120|chromosome 9 open reading frame 69##BC111053|C9orf69|90120|chromosome 9 open reading frame 69##BC014304|C9orf69|90120|chromosome 9 open reading frame 69##BC013282|C9orf69|90120|chromosome 9 open reading frame 69##AK023162|C9orf69|90120|chromosome 9 open reading frame 69##AK091349|C9orf69|90120|chromosome 9 open reading frame 69##BC021231|C9orf69|90120|chromosome 9 open reading frame 69##NM_152833|C9orf69|90120|chromosome 9 open reading frame 69	0.0	
chr9	98638288	98638412	reg1034848.p2	3.768	+	TSC_hg19_v1_chr9_-_98638262 AF194971 AL389954	-27	-	NM_001010895 TSC_hg19_v1_chr9_+_98637942 AK129624 AK308409 AL389953	-409	+	TSC_hg19_v1_chr9_-_98637839 AK092137 AX747374	-497	-	BT019371 CR541894 CU689848 DQ891812 DQ894995 BC034281 NM_000197 U05659	426059	-	TSC_hg19_v1_chr9_-_99145966 HQ258608 AB106537 AB122077 AK307890 BC100278	507581	-	NM_007001 TSC_hg19_v1_chr9_-_99145994 BC113579	507670	-	AF194971|LINC00476|100128782|long intergenic non-protein coding RNA 476##AL389954|LINC00476|100128782|long intergenic non-protein coding RNA 476##NM_001010895|C9orf102|375748|chromosome 9 open reading frame 102##AK308409|C9orf102|375748|chromosome 9 open reading frame 102##AL389953|C9orf102|375748|chromosome 9 open reading frame 102##AK092137|LINC00476|100128782|long intergenic non-protein coding RNA 476##BT019371|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##CR541894|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ891812|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##DQ894995|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##BC034281|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##NM_000197|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##U05659|HSD17B3|3293|hydroxysteroid (17-beta) dehydrogenase 3##HQ258608|SLC35D2|11046|solute carrier family 35, member D2##AB106537|SLC35D2|11046|solute carrier family 35, member D2##AB122077|SLC35D2|11046|solute carrier family 35, member D2##AK307890|SLC35D2|11046|solute carrier family 35, member D2##BC100278|SLC35D2|11046|solute carrier family 35, member D2##NM_007001|SLC35D2|11046|solute carrier family 35, member D2##BC113579|SLC35D2|11046|solute carrier family 35, member D2	0.0	
chr10	44504251	44504432	reg1031935.p2	3.767	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-360035	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-360136	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-402444	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	376158	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	902377	+	AK056518 TSC_hg19_v1_chr10_-_45455156	950806	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.0	
chr11	128595608	128595788	reg1035963.p2	3.767	+	TSC_hg19_v1_chr11_+_128564132 AB385119 AY029368 CU674822 DQ892582 DQ896858	-31556	+	TSC_hg19_v1_chr11_+_128563997 X67001 S45205 BC010115 BC001670	-31643	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	-31718	+	BC136360 BC136361 BC074752 NM_000220 U12541 AK314267 AK290797	116680	-	U12544 U12545 AK308032 U12543 U03884 AK308033 BC063109 NM_153764 NM_153765 NM_153766 NM_153767 U12542	141501	-	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	165642	+	AY029368|FLI1|2313|Friend leukemia virus integration 1##DQ892582|FLI1|2313|Friend leukemia virus integration 1##DQ896858|FLI1|2313|Friend leukemia virus integration 1##X67001|FLI1|2313|Friend leukemia virus integration 1##S45205|FLI1|2313|Friend leukemia virus integration 1##BC010115|FLI1|2313|Friend leukemia virus integration 1##BC001670|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1##BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5	0.0	
chr1	156389815	156389919	reg1038291.p2	3.767	+	AF193807 AK290840 AK294641 AK303799 AK303814 AY139092 AY139093 NM_020407 AK308556 TSC_hg19_v1_chr1_+_156339022 AK054780 BC065218	-50846	+	TSC_hg19_v1_chr1_-_156308103 NM_001008800 NM_005998	-81715	-	TSC_hg19_v1_chr1_-_156308084 AL833197 AB208882 AK308023	-81791	-	NM_006365 U49857 BC059943 BC107686 BC050448 TSC_hg19_v1_chr1_-_156399219 AK095626 BC054045	9409	-	BC040949 TSC_hg19_v1_chr1_-_156460409	70536	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	80651	-	AF193807|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK290840|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK294641|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303799|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303814|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139092|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139093|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_020407|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK308556|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK054780|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##BC065218|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_001008800|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_005998|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AL833197|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AB208882|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##AK308023|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_006365|C1orf61|10485|chromosome 1 open reading frame 61##U49857|C1orf61|10485|chromosome 1 open reading frame 61##BC059943|C1orf61|10485|chromosome 1 open reading frame 61##BC107686|C1orf61|10485|chromosome 1 open reading frame 61##BC050448|C1orf61|10485|chromosome 1 open reading frame 61##AK095626|C1orf61|10485|chromosome 1 open reading frame 61##BC054045|C1orf61|10485|chromosome 1 open reading frame 61##BC040949|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D	0.999751	CTCF.p2:1:1.000
chr1	26907605	26907723	reg1035563.p2	3.767	+	AK292722 NM_001006665 TSC_hg19_v1_chr1_+_26872346	-35306	+	TSC_hg19_v1_chr1_+_26872335 AK092955	-35341	+	TSC_hg19_v1_chr1_+_26856259 BC014966 AK315730 L07597 AB385042 DQ892242 DQ895443	-51329	+	NM_006015 NM_139135 AF231056	114858	+	AB210022 AF219114 AB051293 AF265208 TSC_hg19_v1_chr1_+_27024003	116305	+	TSC_hg19_v1_chr1_+_27101218 AK074940 AK308363	193624	+	AK292722|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_001006665|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK092955|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##BC014966|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##AK315730|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##L07597|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ892242|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##DQ895443|RPS6KA1|6195|ribosomal protein S6 kinase, 90kDa, polypeptide 1##NM_006015|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##NM_139135|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF231056|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AB210022|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF219114|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AF265208|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK074940|ARID1A|8289|AT rich interactive domain 1A (SWI-like)##AK308363|ARID1A|8289|AT rich interactive domain 1A (SWI-like)	0.0	
chr13	102438382	102438485	reg1035223.p2	3.767	+	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	-333438	+	TSC_hg19_v1_chr13_-_102068838 BC028390	-369593	-	AY141972 AK094669 BC012128 NM_052867 TSC_hg19_v1_chr13_-_102068817	-369672	-	NM_004115 U66200	130561	-	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	615642	-	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	810903	+	AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC028390|NALCN|259232|sodium leak channel, non-selective##AY141972|NALCN|259232|sodium leak channel, non-selective##AK094669|NALCN|259232|sodium leak channel, non-selective##BC012128|NALCN|259232|sodium leak channel, non-selective##NM_052867|NALCN|259232|sodium leak channel, non-selective##NM_004115|FGF14|2259|fibroblast growth factor 14##U66200|FGF14|2259|fibroblast growth factor 14##BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II	0.398658	CTCF.p2:-31:0.251
chr17	3627059	3627166	reg1036760.p2	3.767	+	TSC_hg19_v1_chr17_-_3627077 AF289864	-10	-	AB209623 BC016917 AK307959 TSC_hg19_v1_chr17_-_3599535 BC008319 AK290889 NM_001204519 NM_001204520 NM_002561 NM_175080	-27520	-	BC006220 BC028084 TSC_hg19_v1_chr17_-_3599406 BC039015	-27708	-	TSC_hg19_v1_chr17_+_3627210 AK310546 AK315247 BC036181 NM_031965 AK056691 AB039834 AF289865 BC050662 AK292715 BC016626 BC047457	104	+	HQ258689 TSC_hg19_v1_chr17_-_3704463	77341	-	TSC_hg19_v1_chr17_-_3704490 BC113436 BC117207 NM_002208	77399	-	AF289864|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##AB209623|P2RX5-TAX1BP3|100533970|P2RX5-TAX1BP3 readthrough##BC016917|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK307959|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC008319|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK290889|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204519|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204520|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_002561|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_175080|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC006220|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC028084|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC039015|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC036181|GSG2|83903|germ cell associated 2 (haspin)##NM_031965|GSG2|83903|germ cell associated 2 (haspin)##AK056691|GSG2|83903|germ cell associated 2 (haspin)##AB039834|GSG2|83903|germ cell associated 2 (haspin)##AF289865|GSG2|83903|germ cell associated 2 (haspin)##BC050662|GSG2|83903|germ cell associated 2 (haspin)##AK292715|GSG2|83903|germ cell associated 2 (haspin)##BC016626|GSG2|83903|germ cell associated 2 (haspin)##BC047457|GSG2|83903|germ cell associated 2 (haspin)##HQ258689|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC113436|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC117207|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_002208|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)	0.0	
chr2	25153816	25153917	reg1029751.p1	3.767	+	HQ258684 AK027857 BC126235 BC144119 AF033861 NM_004036 AK122926	-11909	-	NM_001199803 AK027859 TSC_hg19_v1_chr2_+_25016332 NM_024322 BC002870 AK315483	-137595	+	TSC_hg19_v1_chr2_-_25016225 CU687260 BC073803 NM_001013663	-137628	-	AK294726 TSC_hg19_v1_chr2_-_25194607	40679	-	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	41001	-	TSC_hg19_v1_chr2_+_25264954 NM_014971 AB023170	111111	+	HQ258684|ADCY3|109|adenylate cyclase 3##AK027857|ADCY3|109|adenylate cyclase 3##BC126235|ADCY3|109|adenylate cyclase 3##BC144119|ADCY3|109|adenylate cyclase 3##AF033861|ADCY3|109|adenylate cyclase 3##NM_004036|ADCY3|109|adenylate cyclase 3##AK122926|ADCY3|109|adenylate cyclase 3##NM_001199803|CENPO|79172|centromere protein O##AK027859|CENPO|79172|centromere protein O##NM_024322|CENPO|79172|centromere protein O##BC002870|CENPO|79172|centromere protein O##AK315483|CENPO|79172|centromere protein O##BC073803|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001013663|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##AK294726|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_014971|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AB023170|EFR3B|22979|EFR3 homolog B (S. cerevisiae)	0.0	
chr2	25502186	25502294	reg1030465.p1	3.767	+	TSC_hg19_v1_chr2_-_25475127 AF480163 NM_153759	-27034	-	TSC_hg19_v1_chr2_-_25468920 AK025230	-33262	-	TSC_hg19_v1_chr2_-_25467080 BC023612	-35105	-	TSC_hg19_v1_chr2_-_25536762 AB527956 EU446951	34567	-	AF067972 TSC_hg19_v1_chr2_-_25564801 BC043617 NM_022552	62559	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	63088	-	AF480163|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_153759|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##EU446951|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF067972|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC043617|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_022552|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.0	
chr3	23803156	23803245	reg1023792.p5	3.767	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	-558445	+	TSC_hg19_v1_chr3_+_23244600 AK307075	-558617	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-1389066	-	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	44210	+	AK314854 TSC_hg19_v1_chr3_+_23847474	44274	+	AK295354 NM_001202476	48733	+	AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK310298|ZNF385D|79750|zinc finger protein 385D##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##AK314854|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_001202476|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.0	
chr4	148328563	148328675	reg1030585.p1	3.767	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	-461621	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	-768528	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	-885623	-	NM_001166055 NM_001957 AK315931 TSC_hg19_v1_chr4_+_148402083	73456	+	TSC_hg19_v1_chr4_+_148402117 D90348 S57498 X61950	73504	+	TSC_hg19_v1_chr4_+_148402244 AK312812 BC022511 AK304451 S45956	73691	+	AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001166055|EDNRA|1909|endothelin receptor type A##NM_001957|EDNRA|1909|endothelin receptor type A##AK315931|EDNRA|1909|endothelin receptor type A##D90348|EDNRA|1909|endothelin receptor type A##S57498|EDNRA|1909|endothelin receptor type A##X61950|EDNRA|1909|endothelin receptor type A##AK312812|EDNRA|1909|endothelin receptor type A##BC022511|EDNRA|1909|endothelin receptor type A##AK304451|EDNRA|1909|endothelin receptor type A##S45956|EDNRA|1909|endothelin receptor type A	0.616096	CTCF.p2:-16:0.616
chr4	71891282	71891364	reg1039273.p1	3.767	+	M60527 TSC_hg19_v1_chr4_+_71859434 BC114617 JF806429 BT019941 BT019942 CR536527 CR541876	-31852	+	TSC_hg19_v1_chr4_+_71859320 NM_000788 AK303292 AK313523 BC103764	-32016	+	NM_001244766 NM_001244767 NM_173468 AK093545 AX748194 TSC_hg19_v1_chr4_+_71768085 AK299481 BC038112 AK313513	-123210	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	161400	+	AF069510 AB470072 AF053753 AF053754 AF310248 EF531618 TSC_hg19_v1_chr4_+_72102322	210963	+	BC030977 NM_003759 AF007216 AK308038 CU689062	313544	+	M60527|DCK|1633|deoxycytidine kinase##BC114617|DCK|1633|deoxycytidine kinase##JF806429|DCK|1633|deoxycytidine kinase##BT019941|DCK|1633|deoxycytidine kinase##BT019942|DCK|1633|deoxycytidine kinase##CR536527|DCK|1633|deoxycytidine kinase##CR541876|DCK|1633|deoxycytidine kinase##NM_000788|DCK|1633|deoxycytidine kinase##AK303292|DCK|1633|deoxycytidine kinase##AK313523|DCK|1633|deoxycytidine kinase##BC103764|DCK|1633|deoxycytidine kinase##NM_001244766|MOB1B|92597|MOB kinase activator 1B##NM_001244767|MOB1B|92597|MOB kinase activator 1B##NM_173468|MOB1B|92597|MOB kinase activator 1B##AK093545|MOB1B|92597|MOB kinase activator 1B##AK299481|MOB1B|92597|MOB kinase activator 1B##BC038112|MOB1B|92597|MOB kinase activator 1B##AK313513|MOB1B|92597|MOB kinase activator 1B##AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	0.473667	CTCF.p2:36:0.474
chr12	52444389	52444569	reg1025999.p2	3.766	+	AK297526 NM_001202233	-27864	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	-43738	+	AK299496 NM_020327	-97316	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	737	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	19275	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	19319	+	AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44	0.0	
chr1	51201170	51201290	reg1036173.p1	3.766	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	-312119	-	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-625692	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-626546	+	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	224347	-	TSC_hg19_v1_chr1_-_51425740 BC067100	224526	-	TSC_hg19_v1_chr1_-_51425796 AJ271408	224569	-	NM_032110|DMRTA2|63950|DMRT-like family A2##AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1##AJ271408|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.938827	CTCF.p2:8:0.939
chr16	67278001	67278182	reg1040305.p1	3.766	+	TSC_hg19_v1_chr16_+_67261032 AF161519 NM_014187 BC003080 BC021109 BC013412	-17039	+	NM_001004055 AF176701 AK316602 AK298088	-17177	-	BC018785 NM_012163	-17371	-	AY192154 AF113615 TSC_hg19_v1_chr16_-_67281385 AB209584 BC033084 AK304232	3257	-	TSC_hg19_v1_chr16_-_67281395 AB041046	3303	-	AK301157 TSC_hg19_v1_chr16_-_67281421 NM_013241	3335	-	AF161519|TMEM208|29100|transmembrane protein 208##NM_014187|TMEM208|29100|transmembrane protein 208##BC003080|TMEM208|29100|transmembrane protein 208##BC021109|TMEM208|29100|transmembrane protein 208##BC013412|TMEM208|29100|transmembrane protein 208##NM_001004055|LRRC29|26231|leucine rich repeat containing 29##AF176701|LRRC29|26231|leucine rich repeat containing 29##AK316602|LRRC29|26231|leucine rich repeat containing 29##AK298088|LRRC29|26231|leucine rich repeat containing 29##BC018785|LRRC29|26231|leucine rich repeat containing 29##NM_012163|LRRC29|26231|leucine rich repeat containing 29##AY192154|FHOD1|29109|formin homology 2 domain containing 1##AF113615|FHOD1|29109|formin homology 2 domain containing 1##AB209584|FHOD1|29109|formin homology 2 domain containing 1##BC033084|FHOD1|29109|formin homology 2 domain containing 1##AK304232|FHOD1|29109|formin homology 2 domain containing 1##AB041046|FHOD1|29109|formin homology 2 domain containing 1##AK301157|FHOD1|29109|formin homology 2 domain containing 1##NM_013241|FHOD1|29109|formin homology 2 domain containing 1	0.0	
chr6	109504448	109504569	reg1036860.p1	3.766	+	BC033448 NM_173830	-54002	+	TSC_hg19_v1_chr6_+_109416697 AK092723 AX747690 AK289910	-87791	+	NM_001083535 BC064365	-88151	+	AK310854 TSC_hg19_v1_chr6_-_109702904	198396	-	TSC_hg19_v1_chr6_-_109703588 AF106518 AF263279 AF299341 DQ891034 DQ894213	199067	-	TSC_hg19_v1_chr6_-_109703614 AK315908 AK298684 AK303525	199100	-	BC033448|CEP57L1|285753|centrosomal protein 57kDa-like 1##NM_173830|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK092723|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK289910|CEP57L1|285753|centrosomal protein 57kDa-like 1##NM_001083535|CEP57L1|285753|centrosomal protein 57kDa-like 1##BC064365|CEP57L1|285753|centrosomal protein 57kDa-like 1##AK310854|CD164|8763|CD164 molecule, sialomucin##AF106518|CD164|8763|CD164 molecule, sialomucin##AF263279|CD164|8763|CD164 molecule, sialomucin##AF299341|CD164|8763|CD164 molecule, sialomucin##DQ891034|CD164|8763|CD164 molecule, sialomucin##DQ894213|CD164|8763|CD164 molecule, sialomucin##AK315908|CD164|8763|CD164 molecule, sialomucin##AK298684|CD164|8763|CD164 molecule, sialomucin##AK303525|CD164|8763|CD164 molecule, sialomucin	0.08329	
chr6	30449975	30450073	reg1032549.p1	3.766	+	TSC_hg19_v1_chr6_+_30312924 NM_001199120 NM_001199121 NM_024839 AF212152 AJ504714 AK026291 BC011730 AJ504713 AJ504715 AJ504716 CU680032	-137060	+	NM_001199119 AB587493 BT007370 CU675745 CU690008	-152934	+	NM_172016 BC034985	-155001	+	NM_005516 AK292391 TSC_hg19_v1_chr6_+_30457288 AK098434 AK225048 AK296822 AK298695 AK300906 AK301125 AK314411 AK316327 BC040479 BC002578 M20022 AB385554 DQ891891 DQ895077 AJ293263 AJ293264 AY216681 AY221103 BC004297 AB209870 M31183	7235	+	TSC_hg19_v1_chr6_-_30523667 AK302480	73594	-	L25665 TSC_hg19_v1_chr6_-_30524034 BT006648 CU676240 DQ890763 DQ893926 DQ896096 BC013959 BC006343 AK026391 AK316391 AK298042 AK293596	74175	-	NM_001199120|RPP21|79897|ribonuclease P/MRP 21kDa subunit##NM_001199121|RPP21|79897|ribonuclease P/MRP 21kDa subunit##NM_024839|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AF212152|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AJ504714|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AK026291|RPP21|79897|ribonuclease P/MRP 21kDa subunit##BC011730|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AJ504713|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AJ504715|RPP21|79897|ribonuclease P/MRP 21kDa subunit##AJ504716|RPP21|79897|ribonuclease P/MRP 21kDa subunit##NM_001199119|TRIM39-RPP21|202658|TRIM39-RPP21 readthrough##BT007370|TRIM39|56658|tripartite motif containing 39##NM_172016|TRIM39|56658|tripartite motif containing 39##BC034985|TRIM39|56658|tripartite motif containing 39##NM_005516|HLA-E|3133|major histocompatibility complex, class I, E##AK292391|HLA-E|3133|major histocompatibility complex, class I, E##AK098434|HLA-E|3133|major histocompatibility complex, class I, E##AK225048|HLA-E|3133|major histocompatibility complex, class I, E##AK296822|HLA-E|3133|major histocompatibility complex, class I, E##AK298695|HLA-E|3133|major histocompatibility complex, class I, E##AK300906|HLA-E|3133|major histocompatibility complex, class I, E##AK301125|HLA-E|3133|major histocompatibility complex, class I, E##AK314411|HLA-E|3133|major histocompatibility complex, class I, E##AK316327|HLA-E|3133|major histocompatibility complex, class I, E##BC040479|HLA-E|3133|major histocompatibility complex, class I, E##BC002578|HLA-E|3133|major histocompatibility complex, class I, E##M20022|HLA-E|3133|major histocompatibility complex, class I, E##DQ891891|HLA-E|3133|major histocompatibility complex, class I, E##DQ895077|HLA-E|3133|major histocompatibility complex, class I, E##AJ293263|HLA-E|3133|major histocompatibility complex, class I, E##AJ293264|HLA-E|3133|major histocompatibility complex, class I, E##AY216681|HLA-E|3133|major histocompatibility complex, class I, E##AY221103|HLA-E|3133|major histocompatibility complex, class I, E##BC004297|HLA-E|3133|major histocompatibility complex, class I, E##AB209870|HLA-E|3133|major histocompatibility complex, class I, E##M31183|HLA-E|3133|major histocompatibility complex, class I, E##AK302480|GNL1|2794|guanine nucleotide binding protein-like 1##L25665|GNL1|2794|guanine nucleotide binding protein-like 1##BT006648|GNL1|2794|guanine nucleotide binding protein-like 1##DQ890763|GNL1|2794|guanine nucleotide binding protein-like 1##DQ893926|GNL1|2794|guanine nucleotide binding protein-like 1##DQ896096|GNL1|2794|guanine nucleotide binding protein-like 1##BC013959|GNL1|2794|guanine nucleotide binding protein-like 1##BC006343|GNL1|2794|guanine nucleotide binding protein-like 1##AK026391|GNL1|2794|guanine nucleotide binding protein-like 1##AK316391|GNL1|2794|guanine nucleotide binding protein-like 1##AK298042|GNL1|2794|guanine nucleotide binding protein-like 1##AK293596|GNL1|2794|guanine nucleotide binding protein-like 1	0.01334	
chr12	110538417	110538598	reg1005968.p2	3.765	+	AK097461 NM_207435	-33008	-	TSC_hg19_v1_chr12_-_110486328 AK021447 BC041968	-52178	-	AK302535 BC032833 TSC_hg19_v1_chr12_+_110437393 CU691256 AY364251	-101064	+	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	23714	+	TSC_hg19_v1_chr12_+_110719041 NM_001681 NM_170665	180528	+	TSC_hg19_v1_chr12_+_110719528 M23114 BC035588 M23115 CU690124	180861	+	AK097461|C12orf76|400073|chromosome 12 open reading frame 76##NM_207435|C12orf76|400073|chromosome 12 open reading frame 76##AK021447|C12orf76|400073|chromosome 12 open reading frame 76##BC041968|C12orf76|400073|chromosome 12 open reading frame 76##AK302535|ANKRD13A|88455|ankyrin repeat domain 13A##BC032833|ANKRD13A|88455|ankyrin repeat domain 13A##AY364251|ANKRD13A|88455|ankyrin repeat domain 13A##NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_001681|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_170665|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23114|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC035588|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23115|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	0.495865	CTCF.p2:61:0.496
chr1	211183409	211183526	reg1038603.p1	3.765	+	NM_001170580 BC051191	-680826	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	-681202	+	NM_001122834 NM_001170564 AK297193	-681871	+	AF078741 AF078742 BC113709 BC143599 TSC_hg19_v1_chr1_-_211307437 AJ001366 NM_002238 NM_172362	123918	-	TSC_hg19_v1_chr1_+_211432710 NM_001136223 NM_001136224 NM_001136225	249241	+	TSC_hg19_v1_chr1_+_211432726 AK131312	249260	+	NM_001170580|HHAT|55733|hedgehog acyltransferase##BC051191|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase##NM_001122834|HHAT|55733|hedgehog acyltransferase##NM_001170564|HHAT|55733|hedgehog acyltransferase##AK297193|HHAT|55733|hedgehog acyltransferase##AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_001136223|RCOR3|55758|REST corepressor 3##NM_001136224|RCOR3|55758|REST corepressor 3##NM_001136225|RCOR3|55758|REST corepressor 3##AK131312|RCOR3|55758|REST corepressor 3	0.0	
chr18	56197337	56197506	reg1003409.p2	3.765	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-308571	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-308618	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-308659	+	BX647796 NM_052947	98767	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	141220	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	141307	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.046307	
chr19	15096099	15096210	reg1032377.p1	3.765	+	TSC_hg19_v1_chr19_-_15090354 BC028721 BC040604	-5728	-	NM_005071 U18244	-12425	-	AB463980 NM_012377 BC110063	-43855	+	AK097684 NM_173482 BC035678	25392	+	EU502748 AK313992 NM_012114	64088	+	BC140930 AB529304 NM_001004713	101679	+	BC028721|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##BC040604|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##NM_005071|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##U18244|SLC1A6|6511|solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6##NM_012377|OR7C2|26658|olfactory receptor, family 7, subfamily C, member 2##BC110063|OR7C2|26658|olfactory receptor, family 7, subfamily C, member 2##AK097684|CCDC105|126402|coiled-coil domain containing 105##NM_173482|CCDC105|126402|coiled-coil domain containing 105##BC035678|CCDC105|126402|coiled-coil domain containing 105##EU502748|CASP14|23581|caspase 14, apoptosis-related cysteine peptidase##AK313992|CASP14|23581|caspase 14, apoptosis-related cysteine peptidase##NM_012114|CASP14|23581|caspase 14, apoptosis-related cysteine peptidase##BC140930|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1##NM_001004713|OR1I1|126370|olfactory receptor, family 1, subfamily I, member 1	0.0	
chr22	26249995	26250163	reg1038312.p1	3.765	+	TSC_hg19_v1_chr22_+_26138168 AY077700	-111895	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	-111959	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-289133	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	315358	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	315418	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	315584	+	AY077700|MYO18B|84700|myosin XVIIIB##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.548137	CTCF.p2:-19:0.548
chr5	124563090	124563270	reg1034273.p1	3.765	+	BC131507 AB033107 BC151226 NM_020747	-482392	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1715298	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1804036	-	NM_001146319 AK316288 AK300154	1132634	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1195663	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	1196007	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.023069	
chr5	138604336	138604424	reg1043992.p2	3.765	+	TSC_hg19_v1_chr5_-_138534058 AJ299442 AK074624 NM_001037633 NM_022464	-70334	-	TSC_hg19_v1_chr5_-_138533998 AY358950 BC011568	-70372	-	AF547994 TSC_hg19_v1_chr5_-_138533996 AK075177	-70391	-	AK307872 NM_001194954 NM_199189 TSC_hg19_v1_chr5_+_138609537	5108	+	TSC_hg19_v1_chr5_+_138609789 BC036498 CR749625 AK293952 AJ224166 AJ224167 AJ224168 AJ224169 AJ224170	5424	+	TSC_hg19_v1_chr5_+_138629336 NM_018834	24959	+	AJ299442|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK074624|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_001037633|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_022464|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AY358950|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##BC011568|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AF547994|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK075177|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK307872|MATR3|9782|matrin 3##NM_001194954|MATR3|9782|matrin 3##NM_199189|MATR3|9782|matrin 3##BC036498|MATR3|9782|matrin 3##CR749625|MATR3|9782|matrin 3##AK293952|MATR3|9782|matrin 3##AJ224166|MATR3|9782|matrin 3##AJ224167|SNHG4|724102|small nucleolar RNA host gene 4 (non-protein coding)##AJ224168|SNHG4|724102|small nucleolar RNA host gene 4 (non-protein coding)##AJ224169|MATR3|9782|matrin 3##AJ224170|SNHG4|724102|small nucleolar RNA host gene 4 (non-protein coding)##NM_018834|MATR3|9782|matrin 3	0.0	
chr5	151759071	151759203	reg1029309.p1	3.765	+	AK312702 AK308539 AK226046 BC114947 BC114967 NM_000171 NM_001146040 X52009	-454775	-	TSC_hg19_v1_chr5_+_151151662 X78262	-607473	+	TSC_hg19_v1_chr5_+_151151516 U32519 BC108278	-607608	+	AF242874 AB041228 AF292402 CU677771 CU688334 DQ891777 DQ894961 AF272363 BC016938 BC067776 NM_020167	25614	-	NM_000827 NM_001114183 TSC_hg19_v1_chr5_+_152870105 AK289565 AK295827 AB209094 AK294011 M81886 X58633 BC111734 M64752 AB527859 AB590570	1111128	+	TSC_hg19_v1_chr5_-_153418471 AF159700 BC011414 BC050701 AK024664 AK298943 AK095446 AK303865 AK313331 AK225821 NM_018691	1659320	-	AK312702|GLRA1|2741|glycine receptor, alpha 1##AK308539|GLRA1|2741|glycine receptor, alpha 1##AK226046|GLRA1|2741|glycine receptor, alpha 1##BC114947|GLRA1|2741|glycine receptor, alpha 1##BC114967|GLRA1|2741|glycine receptor, alpha 1##NM_000171|GLRA1|2741|glycine receptor, alpha 1##NM_001146040|GLRA1|2741|glycine receptor, alpha 1##X52009|GLRA1|2741|glycine receptor, alpha 1##X78262|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##U32519|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##BC108278|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##AF242874|NMUR2|56923|neuromedin U receptor 2##AB041228|NMUR2|56923|neuromedin U receptor 2##AF292402|NMUR2|56923|neuromedin U receptor 2##DQ891777|NMUR2|56923|neuromedin U receptor 2##DQ894961|NMUR2|56923|neuromedin U receptor 2##AF272363|NMUR2|56923|neuromedin U receptor 2##BC016938|NMUR2|56923|neuromedin U receptor 2##BC067776|NMUR2|56923|neuromedin U receptor 2##NM_020167|NMUR2|56923|neuromedin U receptor 2##NM_000827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##NM_001114183|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK289565|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK295827|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AB209094|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AK294011|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M81886|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##X58633|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##BC111734|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##M64752|GRIA1|2890|glutamate receptor, ionotropic, AMPA 1##AF159700|FAM114A2|10827|family with sequence similarity 114, member A2##BC011414|FAM114A2|10827|family with sequence similarity 114, member A2##BC050701|FAM114A2|10827|family with sequence similarity 114, member A2##AK024664|FAM114A2|10827|family with sequence similarity 114, member A2##AK298943|FAM114A2|10827|family with sequence similarity 114, member A2##AK095446|FAM114A2|10827|family with sequence similarity 114, member A2##AK303865|FAM114A2|10827|family with sequence similarity 114, member A2##AK313331|FAM114A2|10827|family with sequence similarity 114, member A2##AK225821|FAM114A2|10827|family with sequence similarity 114, member A2##NM_018691|FAM114A2|10827|family with sequence similarity 114, member A2	0.883443	CTCF.p2:-32:0.883
chr5	77851887	77852039	reg1032658.p1	3.765	+	CR936660 TSC_hg19_v1_chr5_-_77845052	-6940	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-45767	-	D86961 BC136335 BC136336 AY309920 TSC_hg19_v1_chr5_-_77806179	-45909	-	TSC_hg19_v1_chr5_-_77944584 NM_005779	92603	-	J05225 TSC_hg19_v1_chr5_-_78281101	429125	-	AK290865 TSC_hg19_v1_chr5_-_78281134	429170	-	CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##D86961|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136335|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##BC136336|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AY309920|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B	0.844633	CTCF.p2:-39:0.845
chr6	112617450	112617558	reg1044567.p1	3.765	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-41609	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-41699	-	S78569 TSC_hg19_v1_chr6_-_112575748 BC004241 AK304401 BC026237	-41775	-	AK122906 NM_001013734	51027	+	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	1561230	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	1674768	-	BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##S78569|LAMA4|3910|laminin, alpha 4##BC004241|LAMA4|3910|laminin, alpha 4##AK304401|LAMA4|3910|laminin, alpha 4##BC026237|LAMA4|3910|laminin, alpha 4##AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2	0.957853	CTCF.p2:14:0.958
chr8	128218362	128218480	reg1030595.p1	3.765	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-647697	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-647866	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1255008	-	DQ486513 NM_001159542	209435	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	529904	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	530069	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.0	
chr10	78957416	78957522	reg1038543.p1	3.764	+	AF267860 NM_032024	-1414951	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1795904	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1795988	-	AF118141 TSC_hg19_v1_chr10_-_79397246	439756	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	439867	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	439937	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.0	
chr12	829508	829594	reg1031524.p2	3.764	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-56836	-	TSC_hg19_v1_chr12_-_752800 AK298043	-76732	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-77373	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	32605	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	33205	+	BC013629 TSC_hg19_v1_chr12_+_1017145	187531	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr1	38541871	38541968	reg1037686.p1	3.764	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-29470	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-63489	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-63534	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	783467	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	797097	-	AK312811 BC051675 AK123051 NM_030772	805358	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.0	
chr19	8069583	8069715	reg1032480.p1	3.764	+	TSC_hg19_v1_chr19_-_8008615 AK289634 NM_006351	-60993	-	AF026030 BC000679 AB590328 CU689670 BC033628 TSC_hg19_v1_chr19_-_8008548 DQ891301 DQ894486 AK223062 AK309415 AF041254	-61097	-	TSC_hg19_v1_chr19_-_7991004 BC062702 AK098834 NM_206833	-78633	-	TSC_hg19_v1_chr19_-_8070526 U38175 BC003376 NM_001419	876	-	AK292662 NM_001201359 NM_005624	47996	+	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	48298	+	AK289634|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##NM_006351|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AF026030|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##BC033628|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##DQ891301|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##DQ894486|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK223062|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AK309415|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##AF041254|TIMM44|10469|translocase of inner mitochondrial membrane 44 homolog (yeast)##BC062702|CTXN1|404217|cortexin 1##AK098834|CTXN1|404217|cortexin 1##NM_206833|CTXN1|404217|cortexin 1##U38175|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##BC003376|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##NM_001419|ELAVL1|1994|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu antigen R)##AK292662|CCL25|6370|chemokine (C-C motif) ligand 25##NM_001201359|CCL25|6370|chemokine (C-C motif) ligand 25##NM_005624|CCL25|6370|chemokine (C-C motif) ligand 25##BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25	0.0	
chr20	49488090	49488163	reg1036824.p1	3.764	+	AF361220 NM_001010974 NM_017843 NM_198799 TSC_hg19_v1_chr20_+_49411542 AK000502 BC038381 BC047337 AJ511266 BC056883	-76608	+	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	-140057	+	TSC_hg19_v1_chr20_-_49308074 AK124347	-180049	-	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	59597	-	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	86937	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	87242	+	AF361220|BCAS4|55653|breast carcinoma amplified sequence 4##NM_001010974|BCAS4|55653|breast carcinoma amplified sequence 4##NM_017843|BCAS4|55653|breast carcinoma amplified sequence 4##NM_198799|BCAS4|55653|breast carcinoma amplified sequence 4##AK000502|BCAS4|55653|breast carcinoma amplified sequence 4##BC038381|BCAS4|55653|breast carcinoma amplified sequence 4##BC047337|BCAS4|55653|breast carcinoma amplified sequence 4##AJ511266|BCAS4|55653|breast carcinoma amplified sequence 4##BC056883|BCAS4|55653|breast carcinoma amplified sequence 4##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3	0.0	
chr5	79500993	79501064	reg1034722.p2	3.764	+	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-169864	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-214070	-	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-515356	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	50857	-	NM_032567 AK098575 AK314007 AF333098 BC033798	114787	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	202825	+	BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16	0.0	
chr6	57055057	57055164	reg1037432.p1	3.764	+	AF095192 TSC_hg19_v1_chr6_+_57037453 AL050287 BC125039 AB462960 AM392695 AM393005 CR533496	-17672	+	TSC_hg19_v1_chr6_+_57037103 NM_004282 AK001015 AK023735	-18009	+	TSC_hg19_v1_chr6_+_56955021 CU692390 EU832452 EU832534	-100078	+	AB034244 AK313796 NM_183227	31120	-	TSC_hg19_v1_chr6_-_57087081 AF161486 BC015021 NM_016277 CR749371 AK311123	31961	-	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	127305	+	AF095192|BAG2|9532|BCL2-associated athanogene 2##AL050287|BAG2|9532|BCL2-associated athanogene 2##BC125039|BAG2|9532|BCL2-associated athanogene 2##AM392695|BAG2|9532|BCL2-associated athanogene 2##AM393005|BAG2|9532|BCL2-associated athanogene 2##CR533496|BAG2|9532|BCL2-associated athanogene 2##NM_004282|BAG2|9532|BCL2-associated athanogene 2##AK001015|BAG2|9532|BCL2-associated athanogene 2##AK023735|BAG2|9532|BCL2-associated athanogene 2##EU832452|ZNF451|26036|zinc finger protein 451##EU832534|ZNF451|26036|zinc finger protein 451##AB034244|RAB23|51715|RAB23, member RAS oncogene family##AK313796|RAB23|51715|RAB23, member RAS oncogene family##NM_183227|RAB23|51715|RAB23, member RAS oncogene family##AF161486|RAB23|51715|RAB23, member RAS oncogene family##BC015021|RAB23|51715|RAB23, member RAS oncogene family##NM_016277|RAB23|51715|RAB23, member RAS oncogene family##CR749371|RAB23|51715|RAB23, member RAS oncogene family##AK311123|RAB23|51715|RAB23, member RAS oncogene family##BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)	0.191086	
chr8	54108555	54108682	reg1031204.p2	3.764	+	BC069117 BC107101 NM_005285	-256151	+	AB059622 TSC_hg19_v1_chr8_-_53626996 NM_001083617 NM_014781	-481605	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	-481632	-	BC099912 AK310407 AY168006 NM_000912 AY466378	55594	-	AK098305 NM_213620 BC014862 AF125105 TSC_hg19_v1_chr8_-_54755806 BC007421 BC007454 BC025275 AF112204 AF132945 AK308204	647061	-	AK022345 TSC_hg19_v1_chr8_-_54755834	647209	-	BC069117|NPBWR1|2831|neuropeptides B/W receptor 1##BC107101|NPBWR1|2831|neuropeptides B/W receptor 1##NM_005285|NPBWR1|2831|neuropeptides B/W receptor 1##AB059622|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_001083617|RB1CC1|9821|RB1-inducible coiled-coil 1##NM_014781|RB1CC1|9821|RB1-inducible coiled-coil 1##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1##BC099912|OPRK1|4986|opioid receptor, kappa 1##AK310407|OPRK1|4986|opioid receptor, kappa 1##AY168006|OPRK1|4986|opioid receptor, kappa 1##NM_000912|OPRK1|4986|opioid receptor, kappa 1##AY466378|OPRK1|4986|opioid receptor, kappa 1##AK098305|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213620|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC014862|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF125105|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007421|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC007454|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##BC025275|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF112204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AF132945|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK308204|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H	0.0	
chr9	69035832	69035951	reg1038380.p1	3.764	+	TSC_hg19_v1_chr9_+_68726468 AK311167	-309389	+	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	-1109075	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-2482616	+	TSC_hg19_v1_chr9_+_69065493 AK311167	29647	+	NM_001085476	166312	-	AF265442 BC069006 AK293173 NM_001085457	226663	-	AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6	0.283169	CTCF.p2:6:0.283
chrX	1702158	1702262	reg1035165.p2	3.764	+	BC043610 GQ280263 NM_178129 AK126147	-46172	-	AK301844 NM_001173473	-129559	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-130409	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	8319	+	NM_004043 U11090	12137	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	31793	+	BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase	0.665795	CTCF.p2:22:0.666
chrX	56790794	56790881	reg1008883.p2	3.764	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-35146	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-200786	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-531927	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	231134	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	357091	-	BC071694 NM_019003	373220	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.0	
chr10	5888308	5888387	reg1027517.p2	3.763	+	TSC_hg19_v1_chr10_-_5855394 Y13286 AK297177 AK297554 AK312485 NM_001115156 NM_001494	-32912	-	BX648038 AB451295 AB451429 BT006868 CR457073 D13988 DQ890573 DQ893733 BC005145 TSC_hg19_v1_chr10_-_5855330 AK309360	-33081	-	TSC_hg19_v1_chr10_+_5772610 AB095927	-115675	+	TSC_hg19_v1_chr10_-_5931834 BC067892 NM_001009941 NM_001009943 NM_019046	43509	-	TSC_hg19_v1_chr10_+_5932205 AK095343	43852	+	TSC_hg19_v1_chr10_+_5932214 NM_178150	43864	+	Y13286|GDI2|2665|GDP dissociation inhibitor 2##AK297177|GDI2|2665|GDP dissociation inhibitor 2##AK297554|GDI2|2665|GDP dissociation inhibitor 2##AK312485|GDI2|2665|GDP dissociation inhibitor 2##NM_001115156|GDI2|2665|GDP dissociation inhibitor 2##NM_001494|GDI2|2665|GDP dissociation inhibitor 2##BX648038|GDI2|2665|GDP dissociation inhibitor 2##AB451295|GDI2|2665|GDP dissociation inhibitor 2##AB451429|GDI2|2665|GDP dissociation inhibitor 2##BT006868|GDI2|2665|GDP dissociation inhibitor 2##CR457073|GDI2|2665|GDP dissociation inhibitor 2##D13988|GDI2|2665|GDP dissociation inhibitor 2##DQ890573|GDI2|2665|GDP dissociation inhibitor 2##DQ893733|GDI2|2665|GDP dissociation inhibitor 2##BC005145|GDI2|2665|GDP dissociation inhibitor 2##AK309360|GDI2|2665|GDP dissociation inhibitor 2##AB095927|FAM208B|54906|family with sequence similarity 208, member B##BC067892|ANKRD16|54522|ankyrin repeat domain 16##NM_001009941|ANKRD16|54522|ankyrin repeat domain 16##NM_001009943|ANKRD16|54522|ankyrin repeat domain 16##NM_019046|ANKRD16|54522|ankyrin repeat domain 16##AK095343|FBXO18|84893|F-box protein, helicase, 18##NM_178150|FBXO18|84893|F-box protein, helicase, 18	0.0	
chr11	134114863	134114988	reg1003036.p2	3.763	+	TSC_hg19_v1_chr11_+_134094573 BC014128 BC009747	-20317	+	TSC_hg19_v1_chr11_+_134094548 AF452718 NM_052875	-20373	+	TSC_hg19_v1_chr11_+_134094486 BC098386	-20434	+	AK308498 AK308498 AF182413 TSC_hg19_v1_chr11_-_134123259 AF161493 AF059619 BC093074 AK311024 BC006978 NM_001037304 NM_001037305 NM_014174 NM_199297 NM_199298	8274	-	AF126245 AK309838 NM_014384 TSC_hg19_v1_chr11_+_134123461 AK299492 AK301921 AK299795 AK074640 AK000359 AK315980 AK125373 BC001964 AK303569 AK309051 AK309051 CU674960 DQ891093 DQ894275	8525	+	BC011001 NM_001080407	31349	+	BC014128|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##BC009747|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##AF452718|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##NM_052875|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##BC098386|VPS26B|112936|vacuolar protein sorting 26 homolog B (S. pombe)##AK308498|THYN1|29087|thymocyte nuclear protein 1##AK308498|THYN1|29087|thymocyte nuclear protein 1##AF182413|THYN1|29087|thymocyte nuclear protein 1##AF161493|THYN1|29087|thymocyte nuclear protein 1##AF059619|THYN1|29087|thymocyte nuclear protein 1##BC093074|THYN1|29087|thymocyte nuclear protein 1##AK311024|THYN1|29087|thymocyte nuclear protein 1##BC006978|THYN1|29087|thymocyte nuclear protein 1##NM_001037304|THYN1|29087|thymocyte nuclear protein 1##NM_001037305|THYN1|29087|thymocyte nuclear protein 1##NM_014174|THYN1|29087|thymocyte nuclear protein 1##NM_199297|THYN1|29087|thymocyte nuclear protein 1##NM_199298|THYN1|29087|thymocyte nuclear protein 1##AF126245|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK309838|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##NM_014384|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK299492|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK301921|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK299795|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK074640|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK000359|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK125373|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##BC001964|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK303569|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK309051|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##AK309051|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##DQ891093|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##DQ894275|ACAD8|27034|acyl-CoA dehydrogenase family, member 8##BC011001|GLB1L3|112937|galactosidase, beta 1-like 3##NM_001080407|GLB1L3|112937|galactosidase, beta 1-like 3	0.22965	CTCF.p2:-98:0.230
chr11	44747884	44748064	reg1038964.p2	3.763	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-160747	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-160809	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-416298	-	NM_130783	38001	+	TSC_hg19_v1_chr11_-_44956087 AF010315	208133	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	224443	-	AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_130783|TSPAN18|90139|tetraspanin 18##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11	0.0	
chr13	106736274	106736454	reg1002475.p2	3.763	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-617773	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	-618060	+	NM_000452 U10417	-3017169	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	450985	-	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	484121	-	NM_001080396	1783095	-	NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A	0.0	
chr13	39260297	39260478	reg1009647.p2	3.763	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	-336338	+	NM_016617 TSC_hg19_v1_chr13_+_38923946	-336436	+	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	-816489	-	NM_207361	785	+	DQ891676 EU176604 AK313632 BC025760 AK304159 NM_001144033 NM_145286	304539	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	351814	-	AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_207361|FREM2|341640|FRAS1 related extracellular matrix protein 2##DQ891676|STOML3|161003|stomatin (EPB72)-like 3##EU176604|STOML3|161003|stomatin (EPB72)-like 3##AK313632|STOML3|161003|stomatin (EPB72)-like 3##BC025760|STOML3|161003|stomatin (EPB72)-like 3##AK304159|STOML3|161003|stomatin (EPB72)-like 3##NM_001144033|STOML3|161003|stomatin (EPB72)-like 3##NM_145286|STOML3|161003|stomatin (EPB72)-like 3##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1	0.0	
chr14	22745254	22745371	reg1032308.p1	3.763	+	AB463964 NM_001001912 AY726598	-611990	+	NM_001005466 AB529274 BC137371 BC137382	-642266	-	AB528817 NM_001005465	-706438	-	X58763 TSC_hg19_v1_chr14_+_22989364	244037	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	312774	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	312822	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.841792	CTCF.p2:-19:0.842
chr16	85650262	85650442	reg1006365.p2	3.763	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	-3399	+	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	-5331	+	BC093665 BC111944 AK126284 NM_198491	-504298	-	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	72190	-	BC003186 NM_016095 TSC_hg19_v1_chr16_-_85722590	72247	-	TSC_hg19_v1_chr16_-_85784703 NM_206967	134336	-	NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC003186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_016095|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##NM_206967|C16orf74|404550|chromosome 16 open reading frame 74	0.0	
chr17	59489641	59489755	reg1005208.p1	3.763	+	BC046200 NM_203425	-587	+	TSC_hg19_v1_chr17_+_59477713 AL832900 AB209378	-11981	+	TSC_hg19_v1_chr17_+_59477477 U28049	-12202	+	BC142620 TSC_hg19_v1_chr17_+_59529788	40088	+	AF188703 NM_018488 BC136403 BC144062 AB464284	44130	+	CU687600 BC062710 NM_199290 TSC_hg19_v1_chr17_-_59668583	178864	-	BC046200|C17orf82|388407|chromosome 17 open reading frame 82##NM_203425|C17orf82|388407|chromosome 17 open reading frame 82##AL832900|TBX2|6909|T-box 2##AB209378|TBX2|6909|T-box 2##U28049|TBX2|6909|T-box 2##BC142620|TBX4|9496|T-box 4##AF188703|TBX4|9496|T-box 4##NM_018488|TBX4|9496|T-box 4##BC136403|TBX4|9496|T-box 4##BC144062|TBX4|9496|T-box 4##BC062710|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##NM_199290|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2	0.0	
chr21	37661576	37661693	reg1032070.p1	3.763	+	AJ237839 NM_005128	-124796	+	TSC_hg19_v1_chr21_-_37528616 AB004851 BC037580 BC047014	-133003	-	AB041012 NM_001236 AB124847 TSC_hg19_v1_chr21_+_37507383 AK223429 BC002812 AB004854 CR541709	-154285	+	TSC_hg19_v1_chr21_+_37692548 BC058002 NM_015358 AK295133 BC007311 D50926 BC094779 BC132731 BC144116 AK292957 AB489143	30885	+	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	96056	+	BC012126 NM_012130 AY355349	177097	-	AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2##AB004851|LOC100506428|100506428|uncharacterized LOC100506428##BC037580|LOC100506428|100506428|uncharacterized LOC100506428##BC047014|LOC100506428|100506428|uncharacterized LOC100506428##AB041012|CBR3|874|carbonyl reductase 3##NM_001236|CBR3|874|carbonyl reductase 3##AB124847|CBR3|874|carbonyl reductase 3##AK223429|CBR3|874|carbonyl reductase 3##BC002812|CBR3|874|carbonyl reductase 3##AB004854|CBR3|874|carbonyl reductase 3##CR541709|CBR3|874|carbonyl reductase 3##BC058002|MORC3|23515|MORC family CW-type zinc finger 3##NM_015358|MORC3|23515|MORC family CW-type zinc finger 3##AK295133|MORC3|23515|MORC family CW-type zinc finger 3##BC007311|MORC3|23515|MORC family CW-type zinc finger 3##D50926|MORC3|23515|MORC family CW-type zinc finger 3##BC094779|MORC3|23515|MORC family CW-type zinc finger 3##BC132731|MORC3|23515|MORC family CW-type zinc finger 3##BC144116|MORC3|23515|MORC family CW-type zinc finger 3##AK292957|MORC3|23515|MORC family CW-type zinc finger 3##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14	0.0	
chr3	122397878	122398040	reg1004846.p1	3.763	+	BC101701 BC101703 BC143573 AK097916 NM_152615	-63467	+	TSC_hg19_v1_chr3_+_122296496 AK309863 NM_001113523 BX647656 DQ063586	-101479	+	AF307338 AF307339 TSC_hg19_v1_chr3_-_122283426 NM_001146103 NM_031458	-114487	-	TSC_hg19_v1_chr3_+_122399703 NM_017554 AK304269	1739	+	CU680100 CU687786 DQ893066 DQ896319 AB590214 AK096705 BC063629 TSC_hg19_v1_chr3_-_122512667 AF400663 BC011897 AK289410 NM_024610	114644	-	TSC_hg19_v1_chr3_+_122513913 NM_032839 AK027690 AK291176 BC039821 BC033738	115957	+	BC101701|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BC101703|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BC143573|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##AK097916|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##NM_152615|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##NM_001113523|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BX647656|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##DQ063586|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##AF307338|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##AF307339|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_001146103|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_031458|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_017554|PARP14|54625|poly (ADP-ribose) polymerase family, member 14##AK304269|PARP14|54625|poly (ADP-ribose) polymerase family, member 14##DQ893066|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##DQ896319|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK096705|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC063629|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AF400663|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC011897|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK289410|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##NM_024610|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##NM_032839|DIRC2|84925|disrupted in renal carcinoma 2##AK027690|DIRC2|84925|disrupted in renal carcinoma 2##AK291176|DIRC2|84925|disrupted in renal carcinoma 2##BC039821|DIRC2|84925|disrupted in renal carcinoma 2##BC033738|DIRC2|84925|disrupted in renal carcinoma 2	0.0	
chr4	84161837	84162009	reg1029335.p2	3.763	+	TSC_hg19_v1_chr4_-_84035912 AK000140 NM_001130715 NM_016619	-125996	-	AF208846 EU570985 EU570986 TSC_hg19_v1_chr4_-_84035890 AJ422147	-126032	-	BC012205 NM_001130716	-130920	-	TSC_hg19_v1_chr4_-_84205924 DQ895928 EU176380 BC008804 AK023076	43992	-	TSC_hg19_v1_chr4_-_84205952 AK129583 AK300972 BC020728 AJ621061 NM_015697	44080	-	AJ627581 TSC_hg19_v1_chr4_-_84255962 AF084467 AM419200 AY948074 CU690802 AF152376 NM_001199830 AF165154 AK075400	94023	-	AK000140|PLAC8|51316|placenta-specific 8##NM_001130715|PLAC8|51316|placenta-specific 8##NM_016619|PLAC8|51316|placenta-specific 8##AF208846|PLAC8|51316|placenta-specific 8##EU570985|PLAC8|51316|placenta-specific 8##EU570986|PLAC8|51316|placenta-specific 8##AJ422147|PLAC8|51316|placenta-specific 8##BC012205|PLAC8|51316|placenta-specific 8##NM_001130716|PLAC8|51316|placenta-specific 8##DQ895928|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##EU176380|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC008804|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK023076|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK129583|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK300972|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC020728|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AJ621061|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##NM_015697|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AF084467|HPSE|10855|heparanase##AM419200|HPSE|10855|heparanase##AY948074|HPSE|10855|heparanase##AF152376|HPSE|10855|heparanase##NM_001199830|HPSE|10855|heparanase##AF165154|HPSE|10855|heparanase##AK075400|HPSE|10855|heparanase	0.026995	
chr5	53029850	53029954	reg1039456.p2	3.763	+	TSC_hg19_v1_chr5_+_52856474 AF020351 AK307973 CU675075	-173416	+	TSC_hg19_v1_chr5_+_52856468 NM_002495 BC005270	-173438	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	-253352	+	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	576423	-	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	576500	-	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	721622	+	AF020351|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK307973|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##NM_002495|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##BC005270|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3	0.0	
chr5	67563148	67563275	reg1039729.p2	3.763	+	TSC_hg19_v1_chr5_+_67511602 BC094795	-51604	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	-51631	+	BC109069 BC109070 D83597 NM_005582 AK313177	-1070611	-	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	21083	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	23335	+	AK094785 NM_001242466 AK294919	25241	+	BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.0	
chr5	81152836	81152930	reg1031093.p1	3.763	+	TSC_hg19_v1_chr5_-_81046990 NM_012446	-105775	-	TSC_hg19_v1_chr5_-_81046929 AB528651 CU677799 DQ891620 DQ894812 EU176592 EU831646 EU831730 AK293544 AK074537 AK294864 AK297494 AF161465 AF077048 AK299858 AK312337 CR936787 AL080076 BC017020	-105984	-	BC075011 BC075010 AK122960 AB078619 BC089437 NM_130767 TSC_hg19_v1_chr5_-_80690052	-462881	-	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	114962	+	AF318326 TSC_hg19_v1_chr5_+_81267992	115107	+	TSC_hg19_v1_chr5_+_81268100 AL136912	115215	+	NM_012446|SSBP2|23635|single-stranded DNA binding protein 2##DQ891620|SSBP2|23635|single-stranded DNA binding protein 2##DQ894812|SSBP2|23635|single-stranded DNA binding protein 2##EU176592|SSBP2|23635|single-stranded DNA binding protein 2##EU831646|SSBP2|23635|single-stranded DNA binding protein 2##EU831730|SSBP2|23635|single-stranded DNA binding protein 2##AK293544|SSBP2|23635|single-stranded DNA binding protein 2##AK074537|SSBP2|23635|single-stranded DNA binding protein 2##AK294864|SSBP2|23635|single-stranded DNA binding protein 2##AK297494|SSBP2|23635|single-stranded DNA binding protein 2##AF161465|SSBP2|23635|single-stranded DNA binding protein 2##AF077048|SSBP2|23635|single-stranded DNA binding protein 2##AK299858|SSBP2|23635|single-stranded DNA binding protein 2##AK312337|SSBP2|23635|single-stranded DNA binding protein 2##CR936787|SSBP2|23635|single-stranded DNA binding protein 2##AL080076|SSBP2|23635|single-stranded DNA binding protein 2##BC017020|SSBP2|23635|single-stranded DNA binding protein 2##BC075011|ACOT12|134526|acyl-CoA thioesterase 12##BC075010|ACOT12|134526|acyl-CoA thioesterase 12##AK122960|ACOT12|134526|acyl-CoA thioesterase 12##AB078619|ACOT12|134526|acyl-CoA thioesterase 12##BC089437|ACOT12|134526|acyl-CoA thioesterase 12##NM_130767|ACOT12|134526|acyl-CoA thioesterase 12##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AF318326|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AL136912|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)	0.145791	
chr5	83556059	83556165	reg1033984.p2	3.763	+	AK313713 NM_001884 X17405 X78076 X78075	-539178	-	NM_001126336 NM_001164097 NM_001164098 NM_004385 TSC_hg19_v1_chr5_+_82767562 U16306 U26555 X15998 AK307642 AB209491 BC050524 D32039	-788495	+	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	-1182729	+	U70313 AB529078 CU689034 CU691020 EU831927 EU831963 EU832022 EU832056 TSC_hg19_v1_chr5_-_83680238 AK312858 BX648583 BC053656 U70312	124134	-	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	124552	-	TSC_hg19_v1_chr5_+_85913757 AK026505	2357646	+	AK313713|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001884|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X17405|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##X78076|HAPLN1|1404|hyaluronan and proteoglycan link protein 1##NM_001126336|VCAN|1462|versican##NM_001164097|VCAN|1462|versican##NM_001164098|VCAN|1462|versican##NM_004385|VCAN|1462|versican##U16306|VCAN|1462|versican##U26555|VCAN|1462|versican##X15998|VCAN|1462|versican##AK307642|VCAN|1462|versican##AB209491|VCAN|1462|versican##BC050524|VCAN|1462|versican##D32039|VCAN|1462|versican##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U70313|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831927|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU831963|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832022|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##EU832056|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK312858|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BX648583|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC053656|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##U70312|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc	0.0	
chr8	69766475	69766583	reg1036818.p1	3.763	+	BC041961 NM_001195639 NM_052958	-523573	+	AK294299 TSC_hg19_v1_chr8_+_68864738	-901799	+	TSC_hg19_v1_chr8_+_68864614 AY570973	-901896	+	AK095341 NM_001128204 NM_015170 TSC_hg19_v1_chr8_+_70378858 AF545571	612336	+	TSC_hg19_v1_chr8_+_70379077 AK307951	612551	+	NM_001128205 NM_001128206 TSC_hg19_v1_chr8_+_70405045	638510	+	BC041961|C8orf34|116328|chromosome 8 open reading frame 34##NM_001195639|C8orf34|116328|chromosome 8 open reading frame 34##NM_052958|C8orf34|116328|chromosome 8 open reading frame 34##AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AK095341|SULF1|23213|sulfatase 1##NM_001128204|SULF1|23213|sulfatase 1##NM_015170|SULF1|23213|sulfatase 1##AF545571|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1##NM_001128205|SULF1|23213|sulfatase 1##NM_001128206|SULF1|23213|sulfatase 1	0.963794	CTCF.p2:-14:0.964
chr11	101327789	101327947	reg1018431.p2	3.762	+	AK304853 TSC_hg19_v1_chr11_-_101000531 NM_000926	-327365	-	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	-328069	-	AK314174 AF247167 NM_032021	-465104	+	AJ006276 NM_004621	126790	-	TSC_hg19_v1_chr11_+_101785752 NM_020802 AK057230 BC036525 BC146807	457919	+	TSC_hg19_v1_chr11_+_101785949 AK309479 BX647415	458124	+	AK304853|PGR|5241|progesterone receptor##NM_000926|PGR|5241|progesterone receptor##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##AJ006276|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6##NM_004621|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6##NM_020802|KIAA1377|57562|KIAA1377##AK057230|KIAA1377|57562|KIAA1377##BC036525|KIAA1377|57562|KIAA1377##BC146807|KIAA1377|57562|KIAA1377##BX647415|KIAA1377|57562|KIAA1377	0.0	
chr11	128499658	128499752	reg1001220.p1	3.762	+	BX640634 NM_001143820	-42253	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	-107571	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	-107742	-	TSC_hg19_v1_chr11_+_128563793 NM_001167681 NM_002017	64093	+	TSC_hg19_v1_chr11_+_128563966 AK313370	64256	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	64275	+	BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001167681|FLI1|2313|Friend leukemia virus integration 1##NM_002017|FLI1|2313|Friend leukemia virus integration 1##AK313370|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1	0.0	
chr11	50464749	50464851	reg1038657.p1	3.762	+	BC136850 BC136851 NM_001005270	-460730	-	BC137005 NM_001001955	-490858	+	TSC_hg19_v1_chr11_-_49230053 DQ088979 AF176574 BC025672 AK312366 AK295368 AK295470 AK300532 M99487 NM_001014986 NM_001193471 NM_001193472 NM_001193473 NM_004476 S76978	-1234693	-	BC140750 NM_001005272	947647	-	NM_001004703	1050481	+	AF521869 BC001862 NM_024114	4564857	+	BC136850|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC136851|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##NM_001005270|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC137005|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13##NM_001001955|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13##DQ088979|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AF176574|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##BC025672|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK312366|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK295368|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK295470|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK300532|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##M99487|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001014986|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193471|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193472|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193473|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_004476|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##S76978|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##BC140750|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##NM_001005272|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##NM_001004703|OR4C46|119749|olfactory receptor, family 4, subfamily C, member 46##AF521869|TRIM48|79097|tripartite motif containing 48##BC001862|TRIM48|79097|tripartite motif containing 48##NM_024114|TRIM48|79097|tripartite motif containing 48	0.0	
chr1	169085633	169085715	reg1033835.p2	3.762	+	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	-9705	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	-387245	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-539882	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	251418	-	NM_003666 AF288161 U79751 AK223533	251549	+	TSC_hg19_v1_chr1_+_169337450 AK307151 AK291725 BC020716	251775	+	AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_003666|BLZF1|8548|basic leucine zipper nuclear factor 1##AF288161|BLZF1|8548|basic leucine zipper nuclear factor 1##U79751|BLZF1|8548|basic leucine zipper nuclear factor 1##AK223533|BLZF1|8548|basic leucine zipper nuclear factor 1##AK307151|BLZF1|8548|basic leucine zipper nuclear factor 1##AK291725|BLZF1|8548|basic leucine zipper nuclear factor 1##BC020716|BLZF1|8548|basic leucine zipper nuclear factor 1	0.0	
chr1	2232265	2232418	reg1029472.p2	3.762	+	NM_003036 X15218 TSC_hg19_v1_chr1_+_2160159	-72172	+	AK127994 NM_001146310	-93170	-	TSC_hg19_v1_chr1_-_2126212 BC041041 AF469129 BC066360 AK055593 BC103992 NM_182533	-106162	-	TSC_hg19_v1_chr1_-_2322994 AK024003 NM_024848	90651	-	TSC_hg19_v1_chr1_-_2322997 AK299217 AK310323 BC021704	90729	-	TSC_hg19_v1_chr1_+_2323265 NM_007033 AF157324	90894	+	NM_003036|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##X15218|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##AK127994|C1orf86|199990|chromosome 1 open reading frame 86##NM_001146310|C1orf86|199990|chromosome 1 open reading frame 86##BC041041|C1orf86|199990|chromosome 1 open reading frame 86##AF469129|C1orf86|199990|chromosome 1 open reading frame 86##BC066360|C1orf86|199990|chromosome 1 open reading frame 86##AK055593|C1orf86|199990|chromosome 1 open reading frame 86##BC103992|C1orf86|199990|chromosome 1 open reading frame 86##NM_182533|C1orf86|199990|chromosome 1 open reading frame 86##AK024003|MORN1|79906|MORN repeat containing 1##NM_024848|MORN1|79906|MORN repeat containing 1##AK299217|MORN1|79906|MORN repeat containing 1##AK310323|MORN1|79906|MORN repeat containing 1##BC021704|MORN1|79906|MORN repeat containing 1##NM_007033|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)##AF157324|RER1|11079|RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)	0.025808	
chr1	26222230	26222410	reg1001785.p2	3.762	+	BC034015 NM_178422	-24577	-	AK024326 NM_024037 AK223419 BC000209 GQ844687	-36446	-	BC017175 NM_001099626 AY007100	-74965	+	NM_203401	10323	-	BC082228 AB209282 X53305 BX647885 Z11566 AK303692 AK054594 AK311801 D28428 TSC_hg19_v1_chr1_-_26232911 J04991 BC014353 NM_001145454 NM_005563	10621	-	NM_203399	11047	-	BC034015|PAQR7|164091|progestin and adipoQ receptor family member VII##NM_178422|PAQR7|164091|progestin and adipoQ receptor family member VII##AK024326|C1orf135|79000|chromosome 1 open reading frame 135##NM_024037|C1orf135|79000|chromosome 1 open reading frame 135##AK223419|C1orf135|79000|chromosome 1 open reading frame 135##BC000209|C1orf135|79000|chromosome 1 open reading frame 135##GQ844687|C1orf135|79000|chromosome 1 open reading frame 135##BC017175|FAM54B|56181|family with sequence similarity 54, member B##NM_001099626|FAM54B|56181|family with sequence similarity 54, member B##AY007100|FAM54B|56181|family with sequence similarity 54, member B##NM_203401|STMN1|3925|stathmin 1##BC082228|STMN1|3925|stathmin 1##AB209282|STMN1|3925|stathmin 1##X53305|STMN1|3925|stathmin 1##BX647885|STMN1|3925|stathmin 1##Z11566|STMN1|3925|stathmin 1##AK303692|STMN1|3925|stathmin 1##AK054594|STMN1|3925|stathmin 1##AK311801|STMN1|3925|stathmin 1##D28428|STMN1|3925|stathmin 1##J04991|STMN1|3925|stathmin 1##BC014353|STMN1|3925|stathmin 1##NM_001145454|STMN1|3925|stathmin 1##NM_005563|STMN1|3925|stathmin 1##NM_203399|STMN1|3925|stathmin 1	0.0	
chr16	29743763	29743860	reg1033736.p2	3.762	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-53329	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-53417	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-68797	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	13490	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	45775	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	58240	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.0	
chr16	30621703	30621778	reg1035210.p2	3.762	+	AK310459 AB065282 BC014000 NM_138447 TSC_hg19_v1_chr16_-_30621684	-84	-	TSC_hg19_v1_chr16_-_30597103 AK309511 EU446576 AK292465 BC040642 AK298848 AK056692 NM_152458	-24765	-	NM_001024683 NM_145271	-38013	-	TSC_hg19_v1_chr16_+_30662098 CR936781 AK125716	40360	+	TSC_hg19_v1_chr16_+_30662286 BC010232 BC050677 NM_024031 BC011573 BC000119 AK074783	40525	+	NM_001105079	54037	+	AK310459|ZNF689|115509|zinc finger protein 689##AB065282|ZNF689|115509|zinc finger protein 689##BC014000|ZNF689|115509|zinc finger protein 689##NM_138447|ZNF689|115509|zinc finger protein 689##AK309511|ZNF785|146540|zinc finger protein 785##EU446576|ZNF785|146540|zinc finger protein 785##AK292465|ZNF785|146540|zinc finger protein 785##BC040642|ZNF785|146540|zinc finger protein 785##AK298848|ZNF785|146540|zinc finger protein 785##AK056692|ZNF785|146540|zinc finger protein 785##NM_152458|ZNF785|146540|zinc finger protein 785##NM_001024683|ZNF688|146542|zinc finger protein 688##NM_145271|ZNF688|146542|zinc finger protein 688##CR936781|PRR14|78994|proline rich 14##AK125716|PRR14|78994|proline rich 14##BC010232|PRR14|78994|proline rich 14##BC050677|PRR14|78994|proline rich 14##NM_024031|PRR14|78994|proline rich 14##BC011573|PRR14|78994|proline rich 14##BC000119|PRR14|78994|proline rich 14##AK074783|PRR14|78994|proline rich 14##NM_001105079|FBRS|64319|fibrosin	0.0	
chr16	71953077	71953227	reg1028511.p2	3.762	+	TSC_hg19_v1_chr16_+_71929438 AK295066 AK301918 AK057902 AK293022 AK297088 AB097052 D79996 BC000430 BC004359 NM_014761 BC000116	-23709	+	TSC_hg19_v1_chr16_+_71929421 AK291388 AK297336 BC103745	-23738	+	TSC_hg19_v1_chr16_-_71918084 BC012116 AK313693 BC004563 NM_001201552 NM_001201554 NM_001201556	-35108	-	AY164485 NM_181536	80724	-	AK292293 TSC_hg19_v1_chr16_+_72042642 NM_001361 BC065245	89442	+	NM_001126102 NM_005143 AK314700 BC107587 AK055872 BC017862 BC058031 BC070299 K01763 L29394 BC121124 BC121125 X00637 K00422	135371	+	AK295066|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK301918|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK057902|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK293022|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK297088|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AB097052|IST1|9798|increased sodium tolerance 1 homolog (yeast)##D79996|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC000430|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC004359|IST1|9798|increased sodium tolerance 1 homolog (yeast)##NM_014761|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC000116|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK291388|IST1|9798|increased sodium tolerance 1 homolog (yeast)##AK297336|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC103745|IST1|9798|increased sodium tolerance 1 homolog (yeast)##BC012116|ZNF821|55565|zinc finger protein 821##AK313693|ZNF821|55565|zinc finger protein 821##BC004563|ZNF821|55565|zinc finger protein 821##NM_001201552|ZNF821|55565|zinc finger protein 821##NM_001201554|ZNF821|55565|zinc finger protein 821##NM_001201556|ZNF821|55565|zinc finger protein 821##AY164485|PKD1L3|342372|polycystic kidney disease 1-like 3##NM_181536|PKD1L3|342372|polycystic kidney disease 1-like 3##AK292293|DHODH|1723|dihydroorotate dehydrogenase (quinone)##NM_001361|DHODH|1723|dihydroorotate dehydrogenase (quinone)##BC065245|DHODH|1723|dihydroorotate dehydrogenase (quinone)##NM_001126102|HP|3240|haptoglobin##NM_005143|HP|3240|haptoglobin##AK314700|HP|3240|haptoglobin##BC107587|HP|3240|haptoglobin##AK055872|HP|3240|haptoglobin##BC017862|HP|3240|haptoglobin##BC058031|HP|3240|haptoglobin##BC070299|HP|3240|haptoglobin##K01763|HP|3240|haptoglobin##L29394|HP|3240|haptoglobin##BC121124|HP|3240|haptoglobin##BC121125|HP|3240|haptoglobin##X00637|HP|3240|haptoglobin##K00422|HP|3240|haptoglobin	0.0	
chr18	42339227	42339337	reg1023474.p1	3.762	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-78414	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-79168	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1481853	-	NM_001242692 AK292422	453670	+	AF349446 NM_007163	855483	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	964822	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.0	
chr18	60902161	60902337	reg1039969.p2	3.762	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-106314	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-517941	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-518323	+	BC027258 NM_000633 NM_000657	84311	-	TSC_hg19_v1_chr18_-_60986977 X06487	84744	-	TSC_hg19_v1_chr18_-_60987309 M13994	85037	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr19	21203138	21203205	reg1038902.p1	3.762	+	NM_003429 BC068066 TSC_hg19_v1_chr19_+_21106090 U35376 M61866 BC008688	-97085	+	BC067843 TSC_hg19_v1_chr19_+_20959109	-244062	+	BC150651 AK096221 CR749233 TSC_hg19_v1_chr19_-_20844378 BC007116 BX648764 AK131567 BC107803 NM_001076675 NM_145297	-358809	-	AK290475 NM_001172671 NM_025189 TSC_hg19_v1_chr19_+_21203432 AK023721 AX721141 AY269787 BC111776	310	+	NM_182515 AL834415 TSC_hg19_v1_chr19_+_21264973 AK056006 BC022527 BC037782 BC050468 BC064985	61832	+	BX647597 TSC_hg19_v1_chr19_+_21324836 AK308127 NM_133473 AK293072 AB075849 BC065374 BC040506	121685	+	NM_003429|ZNF85|7639|zinc finger protein 85##BC068066|ZNF85|7639|zinc finger protein 85##U35376|ZNF85|7639|zinc finger protein 85##M61866|ZNF85|7639|zinc finger protein 85##BC008688|ZNF85|7639|zinc finger protein 85##AK096221|ZNF626|199777|zinc finger protein 626##CR749233|ZNF626|199777|zinc finger protein 626##BC007116|ZNF626|199777|zinc finger protein 626##BX648764|ZNF626|199777|zinc finger protein 626##BC107803|ZNF626|199777|zinc finger protein 626##NM_001076675|ZNF626|199777|zinc finger protein 626##NM_145297|ZNF626|199777|zinc finger protein 626##AK290475|ZNF430|80264|zinc finger protein 430##NM_001172671|ZNF430|80264|zinc finger protein 430##NM_025189|ZNF430|80264|zinc finger protein 430##AK023721|ZNF430|80264|zinc finger protein 430##AY269787|ZNF430|80264|zinc finger protein 430##BC111776|ZNF430|80264|zinc finger protein 430##NM_182515|ZNF714|148206|zinc finger protein 714##AK056006|ZNF714|148206|zinc finger protein 714##BC022527|ZNF714|148206|zinc finger protein 714##BC037782|ZNF714|148206|zinc finger protein 714##BC050468|ZNF714|148206|zinc finger protein 714##BC064985|ZNF714|148206|zinc finger protein 714##BX647597|ZNF431|170959|zinc finger protein 431##AK308127|ZNF431|170959|zinc finger protein 431##NM_133473|ZNF431|170959|zinc finger protein 431##AK293072|ZNF431|170959|zinc finger protein 431##AB075849|ZNF431|170959|zinc finger protein 431##BC040506|ZNF431|170959|zinc finger protein 431	0.0	
chr21	45604959	45605077	reg1033533.p1	3.762	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-51457	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-51513	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-77719	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	55748	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	55839	-	AF194032 NM_013369 NM_175867	77080	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr2	234475377	234475549	reg1036308.p2	3.762	+	TSC_hg19_v1_chr2_-_234475429 BC067300 AK295112	-46	-	AK001647 AJ583821 NM_018218	-1247	-	D73409 NM_003648	-178664	+	AF462268 NM_019076 AK313488 AF462267 AF030310 AY435143	50858	+	BC020971 NM_019075 BC069210 BC053576 CU676796 AY435137 U89508	69670	+	AK313510 BC058844 NM_021027 BC043491 AF056188 AY435144 CU691312	105079	+	BC067300|USP40|55230|ubiquitin specific peptidase 40##AK295112|USP40|55230|ubiquitin specific peptidase 40##AK001647|USP40|55230|ubiquitin specific peptidase 40##AJ583821|USP40|55230|ubiquitin specific peptidase 40##NM_018218|USP40|55230|ubiquitin specific peptidase 40##D73409|DGKD|8527|diacylglycerol kinase, delta 130kDa##NM_003648|DGKD|8527|diacylglycerol kinase, delta 130kDa##AF462268|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##NM_019076|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AK313488|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AF462267|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AF030310|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AY435143|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##BC020971|UGT1A10|54575|UDP glucuronosyltransferase 1 family, polypeptide A10##NM_019075|UGT1A10|54575|UDP glucuronosyltransferase 1 family, polypeptide A10##BC069210|UGT1A10|54575|UDP glucuronosyltransferase 1 family, polypeptide A10##BC053576|UGT1A10|54575|UDP glucuronosyltransferase 1 family, polypeptide A10##AY435137|UGT1A10|54575|UDP glucuronosyltransferase 1 family, polypeptide A10##U89508|UGT1A10|54575|UDP glucuronosyltransferase 1 family, polypeptide A10##AK313510|UGT1A9|54600|UDP glucuronosyltransferase 1 family, polypeptide A9##BC058844|UGT1A9|54600|UDP glucuronosyltransferase 1 family, polypeptide A9##NM_021027|UGT1A9|54600|UDP glucuronosyltransferase 1 family, polypeptide A9##BC043491|UGT1A9|54600|UDP glucuronosyltransferase 1 family, polypeptide A9##AF056188|UGT1A9|54600|UDP glucuronosyltransferase 1 family, polypeptide A9##AY435144|UGT1A9|54600|UDP glucuronosyltransferase 1 family, polypeptide A9	0.0	
chr2	74198298	74198412	reg1038714.p1	3.762	+	TSC_hg19_v1_chr2_+_74154019 X97386	-44309	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-44355	+	TSC_hg19_v1_chr2_+_74153968 NM_080916 NM_080918	-44405	+	NM_144993	75094	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	176663	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	176865	+	X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##NM_080916|DGUOK|1716|deoxyguanosine kinase##NM_080918|DGUOK|1716|deoxyguanosine kinase##NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.044225	
chr3	130612113	130612281	reg1005920.p2	3.762	+	NM_001199180 NM_001199181 NM_001199182 AK296470	-42791	+	BC127105 BC127106 TSC_hg19_v1_chr3_-_130465651 AK314219 BC110318 BC009899 BC017332 BC057239 NM_014602	-146594	-	AM774225 NM_001102608	-333020	+	TSC_hg19_v1_chr3_+_130612841 AB037768 NM_001199179 NM_001001485 NM_001199183 NM_001199184 AF189723 AF225981 AK304175 BC028139 NM_001199185 NM_014382 AF181120 AF181121 AK314342 NM_001001486 NM_001001487 AY268374 AY268375	948	+	AK301388 BC069265 AK027806 NM_014065 AK294156	133443	-	AK297300 NM_001146003 NM_024800 NM_145910 AK123021 AL833472 AB071996 AB071997 BC026195 AK293261 AK316352	133538	+	NM_001199180|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199181|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199182|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK296470|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##BC127105|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC127106|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AK314219|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC110318|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC009899|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC017332|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##BC057239|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##NM_014602|PIK3R4|30849|phosphoinositide-3-kinase, regulatory subunit 4##AM774225|COL6A6|131873|collagen, type VI, alpha 6##NM_001102608|COL6A6|131873|collagen, type VI, alpha 6##AB037768|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199179|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001485|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199183|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199184|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF189723|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF225981|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK304175|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##BC028139|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001199185|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_014382|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181120|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AF181121|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK314342|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001486|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##NM_001001487|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268374|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AY268375|ATP2C1|27032|ATPase, Ca++ transporting, type 2C, member 1##AK301388|ASTE1|28990|asteroid homolog 1 (Drosophila)##BC069265|ASTE1|28990|asteroid homolog 1 (Drosophila)##AK027806|ASTE1|28990|asteroid homolog 1 (Drosophila)##NM_014065|ASTE1|28990|asteroid homolog 1 (Drosophila)##AK294156|ASTE1|28990|asteroid homolog 1 (Drosophila)##AK297300|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##NM_001146003|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##NM_024800|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##NM_145910|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK123021|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AL833472|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AB071996|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AB071997|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##BC026195|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK293261|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11##AK316352|NEK11|79858|NIMA (never in mitosis gene a)- related kinase 11	0.0	
chr3	47021234	47021313	reg1038536.p2	3.762	+	TSC_hg19_v1_chr3_+_47021155 NM_015175 AK131104 AB384492	-26	+	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	-3028	-	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	-97531	+	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	8197	+	TSC_hg19_v1_chr3_-_47098906 AK026837	77670	-	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	184166	-	NM_015175|NBEAL2|23218|neurobeachin-like 2##AK131104|NBEAL2|23218|neurobeachin-like 2##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12##BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor##AK092871|NBEAL2|23218|neurobeachin-like 2##AK026837|SETD2|29072|SET domain containing 2##AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2	0.0	
chr6	35016769	35016836	reg1039294.p1	3.762	+	TSC_hg19_v1_chr6_+_34857037 BC022396 NM_015245 D86982 BC031934 BC086310 AK298987 BC132832 BC144341 AB385297	-159702	+	AF118094 AB464280 BT019404 BT019405 CR542068 DQ893239 DQ896569 TSC_hg19_v1_chr6_-_34855820 AK313475 BC021972 D63705 AK302226 NM_005643 X83928	-161097	-	TSC_hg19_v1_chr6_+_34759872 AK000309 BC108710 BX640641 AB126777 BC137120 BC137127	-256913	+	AK057234 AK316403 AF536532 BC040003 BC033729 BC090050 AK301778 AK302022 TSC_hg19_v1_chr6_-_35109091 AK098590 AK301975 AK302456 AK302375 AK315078 BC048418 AF536533 NM_001093728 NM_018679	92292	-	TSC_hg19_v1_chr6_+_35181732 BC052263 AK291218	165066	+	TSC_hg19_v1_chr6_+_35182182 AF452494 NM_152753 EU832354 EU832439 AY639608	165386	+	BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##AF118094|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BT019404|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BT019405|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##CR542068|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##DQ893239|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##DQ896569|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##AK313475|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BC021972|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##D63705|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##AK302226|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##NM_005643|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##X83928|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BX640641|UHRF1BP1|54887|UHRF1 binding protein 1##AB126777|UHRF1BP1|54887|UHRF1 binding protein 1##BC137120|UHRF1BP1|54887|UHRF1 binding protein 1##BC137127|UHRF1BP1|54887|UHRF1 binding protein 1##AK057234|TCP11|6954|t-complex 11 homolog (mouse)##AK316403|TCP11|6954|t-complex 11 homolog (mouse)##AF536532|TCP11|6954|t-complex 11 homolog (mouse)##BC040003|TCP11|6954|t-complex 11 homolog (mouse)##BC033729|TCP11|6954|t-complex 11 homolog (mouse)##BC090050|TCP11|6954|t-complex 11 homolog (mouse)##AK301778|TCP11|6954|t-complex 11 homolog (mouse)##AK302022|TCP11|6954|t-complex 11 homolog (mouse)##AK098590|TCP11|6954|t-complex 11 homolog (mouse)##AK301975|TCP11|6954|t-complex 11 homolog (mouse)##AK302456|TCP11|6954|t-complex 11 homolog (mouse)##AK302375|TCP11|6954|t-complex 11 homolog (mouse)##AK315078|TCP11|6954|t-complex 11 homolog (mouse)##BC048418|TCP11|6954|t-complex 11 homolog (mouse)##AF536533|TCP11|6954|t-complex 11 homolog (mouse)##NM_001093728|TCP11|6954|t-complex 11 homolog (mouse)##NM_018679|TCP11|6954|t-complex 11 homolog (mouse)##BC052263|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AK291218|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AF452494|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##NM_152753|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##EU832354|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##EU832439|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AY639608|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3	0.218031	CTCF.p2:-20:0.218
chr7	140426295	140426407	reg1038579.p2	3.762	+	TSC_hg19_v1_chr7_+_140396507 AF067166 NM_004546 AF050639 BC063026 BC001168 CR542121	-29848	+	TSC_hg19_v1_chr7_+_140372910 AF131745 AY302592 NM_052853 BC014107	-53413	+	AB033103 TSC_hg19_v1_chr7_-_140340614	-85741	-	TSC_hg19_v1_chr7_-_140624512 AB529216 AK314346 BC101757 BC112079 M95712 NM_004333	198156	-	AF151897 AK024776 NM_016071	288116	-	TSC_hg19_v1_chr7_-_140714748 AF078858 BC105793	288399	-	AF067166|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##NM_004546|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF050639|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC063026|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC001168|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##CR542121|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF131745|ADCK2|90956|aarF domain containing kinase 2##AY302592|ADCK2|90956|aarF domain containing kinase 2##NM_052853|ADCK2|90956|aarF domain containing kinase 2##BC014107|ADCK2|90956|aarF domain containing kinase 2##AB033103|DENND2A|27147|DENN/MADD domain containing 2A##AK314346|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC101757|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC112079|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##M95712|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##NM_004333|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##AF151897|MRPS33|51650|mitochondrial ribosomal protein S33##AK024776|MRPS33|51650|mitochondrial ribosomal protein S33##NM_016071|MRPS33|51650|mitochondrial ribosomal protein S33##AF078858|MRPS33|51650|mitochondrial ribosomal protein S33##BC105793|MRPS33|51650|mitochondrial ribosomal protein S33	0.384187	CTCF.p2:-28:0.384
chrX	1603115	1603220	reg1034533.p1	3.762	+	AK301844 NM_001173473	-30516	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-31366	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-92198	-	BC043610 GQ280263 NM_178129 AK126147	52871	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	107362	+	NM_004043 U11090	111180	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chrX	48352593	48352698	reg1041009.p1	3.762	+	AF063015 NM_177434 AB590908 CU692806	-16238	+	TSC_hg19_v1_chrX_+_48334590 AK024023 NM_012280 NM_177439 AJ005892 AK297486 AK315138 BC021047 BC023584	-18098	+	TSC_hg19_v1_chrX_-_48328624 NM_033518	-24023	-	TSC_hg19_v1_chrX_+_48367379 NM_022825 NM_203473 AK293347 AK056340 BC019080 AK057727 AK314745	14766	+	AK316378 NM_203474 NM_203475 AF317058 AF317059 AF317060 AF317061 AB529146 CU676372 DQ892632 DQ895869	15490	+	NM_006579 TSC_hg19_v1_chrX_+_48380224 BC001549 BC001572 Z37986	27564	+	AF063015|FTSJ1|24140|FtsJ homolog 1 (E. coli)##NM_177434|FTSJ1|24140|FtsJ homolog 1 (E. coli)##AK024023|FTSJ1|24140|FtsJ homolog 1 (E. coli)##NM_012280|FTSJ1|24140|FtsJ homolog 1 (E. coli)##NM_177439|FTSJ1|24140|FtsJ homolog 1 (E. coli)##AJ005892|FTSJ1|24140|FtsJ homolog 1 (E. coli)##AK297486|FTSJ1|24140|FtsJ homolog 1 (E. coli)##AK315138|FTSJ1|24140|FtsJ homolog 1 (E. coli)##BC021047|FTSJ1|24140|FtsJ homolog 1 (E. coli)##BC023584|FTSJ1|24140|FtsJ homolog 1 (E. coli)##NM_033518|SLC38A5|92745|solute carrier family 38, member 5##NM_022825|PORCN|64840|porcupine homolog (Drosophila)##NM_203473|PORCN|64840|porcupine homolog (Drosophila)##AK293347|PORCN|64840|porcupine homolog (Drosophila)##AK056340|PORCN|64840|porcupine homolog (Drosophila)##BC019080|PORCN|64840|porcupine homolog (Drosophila)##AK057727|PORCN|64840|porcupine homolog (Drosophila)##AK314745|PORCN|64840|porcupine homolog (Drosophila)##AK316378|PORCN|64840|porcupine homolog (Drosophila)##NM_203474|PORCN|64840|porcupine homolog (Drosophila)##NM_203475|PORCN|64840|porcupine homolog (Drosophila)##AF317058|PORCN|64840|porcupine homolog (Drosophila)##AF317059|PORCN|64840|porcupine homolog (Drosophila)##AF317060|PORCN|64840|porcupine homolog (Drosophila)##AF317061|PORCN|64840|porcupine homolog (Drosophila)##DQ892632|PORCN|64840|porcupine homolog (Drosophila)##DQ895869|PORCN|64840|porcupine homolog (Drosophila)##NM_006579|EBP|10682|emopamil binding protein (sterol isomerase)##BC001549|EBP|10682|emopamil binding protein (sterol isomerase)##BC001572|EBP|10682|emopamil binding protein (sterol isomerase)##Z37986|EBP|10682|emopamil binding protein (sterol isomerase)	0.012401	
chr12	63844699	63844841	reg1039172.p1	3.761	+	NM_000706	-298181	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	-300099	-	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	-515845	-	BC125215 BC125216 TSC_hg19_v1_chr12_-_64062283 AY358792 AL833344 AK310102 AK057511 BC068442 NM_173812	217526	-	TSC_hg19_v1_chr12_+_64173629 AB015633 NM_014254 BC013152 BC002596 AK289382 CU680528 DQ891077 DQ894259	328897	+	BX647105 BX647419 TSC_hg19_v1_chr12_+_64173925	329165	+	NM_000706|AVPR1A|552|arginine vasopressin receptor 1A##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A##BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC125215|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC125216|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AY358792|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AL833344|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK310102|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AK057511|DPY19L2|283417|dpy-19-like 2 (C. elegans)##BC068442|DPY19L2|283417|dpy-19-like 2 (C. elegans)##NM_173812|DPY19L2|283417|dpy-19-like 2 (C. elegans)##AB015633|TMEM5|10329|transmembrane protein 5##NM_014254|TMEM5|10329|transmembrane protein 5##BC013152|TMEM5|10329|transmembrane protein 5##BC002596|TMEM5|10329|transmembrane protein 5##AK289382|TMEM5|10329|transmembrane protein 5##DQ891077|TMEM5|10329|transmembrane protein 5##DQ894259|TMEM5|10329|transmembrane protein 5##BX647105|TMEM5|10329|transmembrane protein 5##BX647419|TMEM5|10329|transmembrane protein 5	0.500443	CTCF.p2:1:0.500
chr14	55596384	55596528	reg1031541.p1	3.761	+	TSC_hg19_v1_chr14_+_55595969 AB006780 BC053667 BC068068 M36682 BC001120 M35368 M57710	-471	+	TSC_hg19_v1_chr14_+_55595963 NM_001177388 NM_002306 AK314929	-508	+	AK025580 TSC_hg19_v1_chr14_+_55518408 BC015621	-78025	+	TSC_hg19_v1_chr14_-_55650349 BT007344	53950	-	TSC_hg19_v1_chr14_-_55658298 BX248255 D13633 AK291847 AK299338 BC010658 AK297480 AB076695 NM_001146015 NM_014750	61844	-	NM_017943 AK092879 AX747787 TSC_hg19_v1_chr14_+_55738097 BC109120 BC109121	141603	+	AB006780|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC053667|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC068068|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M36682|LGALS3|3958|lectin, galactoside-binding, soluble, 3##BC001120|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M35368|LGALS3|3958|lectin, galactoside-binding, soluble, 3##M57710|LGALS3|3958|lectin, galactoside-binding, soluble, 3##NM_001177388|LGALS3|3958|lectin, galactoside-binding, soluble, 3##NM_002306|LGALS3|3958|lectin, galactoside-binding, soluble, 3##AK314929|LGALS3|3958|lectin, galactoside-binding, soluble, 3##AK025580|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##BC015621|MAPK1IP1L|93487|mitogen-activated protein kinase 1 interacting protein 1-like##BT007344|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##BX248255|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##D13633|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK291847|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK299338|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##BC010658|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AK297480|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##AB076695|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_001146015|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_014750|DLGAP5|9787|discs, large (Drosophila) homolog-associated protein 5##NM_017943|FBXO34|55030|F-box protein 34##AK092879|FBXO34|55030|F-box protein 34##BC109120|FBXO34|55030|F-box protein 34##BC109121|FBXO34|55030|F-box protein 34	0.0	
chr15	40857440	40857546	reg1036538.p2	3.761	+	TSC_hg19_v1_chr15_-_40857235 AK312842 AK293079 NM_001080791 NM_001080792 NM_052849	-253	-	AK092214 AX747411 AL832032 AK098781 TSC_hg19_v1_chr15_-_40857211	-291	-	NM_130468 AB066595 BC049214 TSC_hg19_v1_chr15_+_40763222 BC053633 AF282905 AK074739 CU690606 AF401222 AY358446 BC023653	-94151	+	TSC_hg19_v1_chr15_+_40861497 AK301383	4005	+	BC007697 TSC_hg19_v1_chr15_+_40861516	4024	+	TSC_hg19_v1_chr15_+_40861527 AK293145 BC016967	4035	+	AK312842|C15orf57|90416|chromosome 15 open reading frame 57##AK293079|C15orf57|90416|chromosome 15 open reading frame 57##NM_001080791|C15orf57|90416|chromosome 15 open reading frame 57##NM_001080792|C15orf57|90416|chromosome 15 open reading frame 57##NM_052849|C15orf57|90416|chromosome 15 open reading frame 57##AK092214|C15orf57|90416|chromosome 15 open reading frame 57##AL832032|C15orf57|90416|chromosome 15 open reading frame 57##AK098781|C15orf57|90416|chromosome 15 open reading frame 57##NM_130468|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AB066595|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC049214|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC053633|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AF282905|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AK074739|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AF401222|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AY358446|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC023653|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AK301383|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2##BC007697|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2##AK293145|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2##BC016967|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	0.0	
chr17	64709991	64710150	reg1024944.p2	3.761	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	-411143	+	TSC_hg19_v1_chr17_+_64298733 BC053321	-411320	+	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	-484545	-	AK290171 TSC_hg19_v1_chr17_+_64831234	121165	+	BC101633 NM_145811 BC101607 AF361351 AF458898	163350	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	250819	+	NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##BC053321|PRKCA|5578|protein kinase C, alpha##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	0.0	
chr18	45523999	45524111	reg1035936.p1	3.761	+	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	-66566	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	-66840	-	BC014840 NM_005901	-67130	-	AM988836 AK296709 NM_001039360 EF120357	139644	-	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	411654	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	541718	+	NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor	0.928021	CTCF.p2:16:0.928
chr19	1021602	1021783	reg1037938.p2	3.761	+	TSC_hg19_v1_chr19_-_1021123 AK095756 NM_001033026 NM_033420	-524	-	DQ893224 DQ896554 CU679197 TSC_hg19_v1_chr19_-_1021121 BC008957 DQ005958	-634	-	TSC_hg19_v1_chr19_+_1000312 AY507106 AY507107 NM_138690	-21327	+	TSC_hg19_v1_chr19_+_1026273 NM_004368 NM_201277	4607	+	AK295271 TSC_hg19_v1_chr19_+_1026595	4898	+	TSC_hg19_v1_chr19_+_1026609 AK126391	4918	+	AK095756|C19orf6|91304|chromosome 19 open reading frame 6##NM_001033026|C19orf6|91304|chromosome 19 open reading frame 6##NM_033420|C19orf6|91304|chromosome 19 open reading frame 6##DQ893224|C19orf6|91304|chromosome 19 open reading frame 6##DQ896554|C19orf6|91304|chromosome 19 open reading frame 6##BC008957|C19orf6|91304|chromosome 19 open reading frame 6##DQ005958|C19orf6|91304|chromosome 19 open reading frame 6##AY507106|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##AY507107|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_138690|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_004368|CNN2|1265|calponin 2##NM_201277|CNN2|1265|calponin 2##AK295271|CNN2|1265|calponin 2##AK126391|CNN2|1265|calponin 2	0.0	
chr19	12274423	12274529	reg1026561.p3	3.761	+	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	-567	+	BC007868 AK096560 AK292455 NM_145233 TSC_hg19_v1_chr19_-_12267555	-6930	-	AL080125 AK023094 BC036714 TSC_hg19_v1_chr19_-_12251166 NM_001203250 NM_021143	-23320	-	AK023304 TSC_hg19_v1_chr19_+_12305836	31357	+	TSC_hg19_v1_chr19_+_12305871 AK093188 AX721123	31430	+	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	131176	-	NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136##BC007868|ZNF625|90589|zinc finger protein 625##AK096560|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##AK292455|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##NM_145233|ZNF625|90589|zinc finger protein 625##AL080125|ZNF20|7568|zinc finger protein 20##AK023094|ZNF20|7568|zinc finger protein 20##BC036714|ZNF20|7568|zinc finger protein 20##NM_001203250|ZNF20|7568|zinc finger protein 20##NM_021143|ZNF20|7568|zinc finger protein 20##AK023304|LOC100289333|100289333|uncharacterized LOC100289333##BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44	0.0	
chr19	16658306	16658381	reg1035837.p1	3.761	+	TSC_hg19_v1_chr19_-_16653256 NM_006387	-5080	-	BC021294 TSC_hg19_v1_chr19_-_16653249	-5095	-	TSC_hg19_v1_chr19_-_16653240 AK296883	-5104	-	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	24853	-	TSC_hg19_v1_chr19_+_16683381 AK094229	25054	+	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	80657	-	NM_006387|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##BC021294|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK296883|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26	0.0	
chr2	119765853	119765938	reg1037348.p2	3.761	+	BC016004 NM_006770 AK313139 AK301407 AB590405 AF035819 CU677543 DQ892823 DQ892833 DQ896080 AK297030	-66075	+	NM_001426	-160137	-	AK298599 TSC_hg19_v1_chr2_+_118846046 AK291433 AF527632 BC022475 NM_016133 BX647805 AK021692	-919832	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	150509	-	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	215490	+	TSC_hg19_v1_chr2_+_119981409 AF423424 AK001691 AY029585 AY214461 BX538047 AK291608 AF238864 AF262322 AY082673 BC095421 BC042150	215532	+	BC016004|MARCO|8685|macrophage receptor with collagenous structure##NM_006770|MARCO|8685|macrophage receptor with collagenous structure##AK313139|MARCO|8685|macrophage receptor with collagenous structure##AK301407|MARCO|8685|macrophage receptor with collagenous structure##AF035819|MARCO|8685|macrophage receptor with collagenous structure##DQ892823|MARCO|8685|macrophage receptor with collagenous structure##DQ892833|MARCO|8685|macrophage receptor with collagenous structure##DQ896080|MARCO|8685|macrophage receptor with collagenous structure##AK297030|MARCO|8685|macrophage receptor with collagenous structure##NM_001426|EN1|2019|engrailed homeobox 1##AK298599|INSIG2|51141|insulin induced gene 2##AK291433|INSIG2|51141|insulin induced gene 2##AF527632|INSIG2|51141|insulin induced gene 2##BC022475|INSIG2|51141|insulin induced gene 2##NM_016133|INSIG2|51141|insulin induced gene 2##BX647805|INSIG2|51141|insulin induced gene 2##AK021692|INSIG2|51141|insulin induced gene 2##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase##AF423424|STEAP3|55240|STEAP family member 3, metalloreductase##AK001691|STEAP3|55240|STEAP family member 3, metalloreductase##AY029585|STEAP3|55240|STEAP family member 3, metalloreductase##AY214461|STEAP3|55240|STEAP family member 3, metalloreductase##BX538047|STEAP3|55240|STEAP family member 3, metalloreductase##AK291608|STEAP3|55240|STEAP family member 3, metalloreductase##AF238864|STEAP3|55240|STEAP family member 3, metalloreductase##AF262322|STEAP3|55240|STEAP family member 3, metalloreductase##AY082673|STEAP3|55240|STEAP family member 3, metalloreductase##BC095421|STEAP3|55240|STEAP family member 3, metalloreductase##BC042150|STEAP3|55240|STEAP family member 3, metalloreductase	0.0	
chr22	39854269	39854385	reg1036248.p1	3.761	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	-791	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	-1007	+	TSC_hg19_v1_chr22_+_39795812 AK291668 AK316004 AK308903 AB591024 CU690722	-58516	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	28963	+	TSC_hg19_v1_chr22_+_39898257 NM_019008	43938	+	TSC_hg19_v1_chr22_+_39898332 AL834205	43983	+	BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK291668|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK316004|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK308903|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_019008|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL834205|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like	0.0	
chr4	40674866	40674995	reg1031956.p1	3.761	+	AK304206 TSC_hg19_v1_chr4_-_40632775	-42223	-	TSC_hg19_v1_chr4_-_40631882 BC034402 BC071585 NM_001098634	-43065	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	-156972	-	BC042401 NM_024677 BC036568 AK024063	77016	+	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	184245	-	BC088372 TSC_hg19_v1_chr4_-_40936716	261748	-	AK304206|RBM47|54502|RNA binding motif protein 47##BC034402|RBM47|54502|RNA binding motif protein 47##BC071585|RBM47|54502|RNA binding motif protein 47##NM_001098634|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2	0.0	
chr4	53489561	53489668	reg1034257.p2	3.761	+	TSC_hg19_v1_chr4_+_52917480 AK304386 AK057468 BC025396 NM_145263 AK314799	-572081	+	BT019433 CR456810 DQ893140 DQ896425 EU176433 U29586 TSC_hg19_v1_chr4_-_52904447 AK299765 BC020709 AK289892 U31116 NM_000232	-585157	-	CR749811 NM_001024611	-605829	-	AK302438 NM_001134223	33143	-	DQ896764 EU176797 GU455414 AK022614 TSC_hg19_v1_chr4_-_53525461 AK299883 BC037574 AK024318 AK296493 NM_022832	35795	-	TSC_hg19_v1_chr4_+_53578670 BC045566 BC015222 D28589	89050	+	AK304386|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK057468|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BC025396|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##NM_145263|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##AK314799|SPATA18|132671|spermatogenesis associated 18 homolog (rat)##BT019433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR456810|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ893140|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##DQ896425|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##EU176433|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U29586|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK299765|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##BC020709|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##AK289892|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##U31116|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##NM_000232|SGCB|6443|sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)##CR749811|LRRC66|339977|leucine rich repeat containing 66##NM_001024611|LRRC66|339977|leucine rich repeat containing 66##AK302438|USP46|64854|ubiquitin specific peptidase 46##NM_001134223|USP46|64854|ubiquitin specific peptidase 46##DQ896764|USP46|64854|ubiquitin specific peptidase 46##EU176797|USP46|64854|ubiquitin specific peptidase 46##GU455414|USP46|64854|ubiquitin specific peptidase 46##AK022614|USP46|64854|ubiquitin specific peptidase 46##AK299883|USP46|64854|ubiquitin specific peptidase 46##BC037574|USP46|64854|ubiquitin specific peptidase 46##AK024318|USP46|64854|ubiquitin specific peptidase 46##AK296493|USP46|64854|ubiquitin specific peptidase 46##NM_022832|USP46|64854|ubiquitin specific peptidase 46##BC045566|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)##BC015222|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)##D28589|SNHG13|57291|small nucleolar RNA host gene 13 (non-protein coding)	0.0	
chr5	17132759	17132895	reg1039682.p1	3.761	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-196442	-	BC050682 BC041694 TSC_hg19_v1_chr5_-_16936357 BC108736 BC032669	-196499	-	AK316138 TSC_hg19_v1_chr5_-_16742338	-390490	-	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	84785	+	TSC_hg19_v1_chr5_+_17217804 AF039656	85013	+	AK295087 BC031051 NM_001167667 NM_004934	2855495	-	AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##BC050682|MYO10|4651|myosin X##BC041694|MYO10|4651|myosin X##BC108736|MYO10|4651|myosin X##BC032669|MYO10|4651|myosin X##AK316138|MYO10|4651|myosin X##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2	0.093784	
chr5	78054347	78054527	reg1033606.p2	3.761	+	TSC_hg19_v1_chr5_-_77944584 NM_005779	-109871	-	CR936660 TSC_hg19_v1_chr5_-_77845052	-209414	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-248241	-	J05225 TSC_hg19_v1_chr5_-_78281101	226651	-	AK290865 TSC_hg19_v1_chr5_-_78281134	226696	-	TSC_hg19_v1_chr5_-_78281142 AK314903	226709	-	NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B##AK314903|ARSB|411|arylsulfatase B	0.0	
chr7	137580415	137580596	reg1033643.p2	3.761	+	TSC_hg19_v1_chr7_+_137531690 BC047556	-48773	+	TSC_hg19_v1_chr7_-_137531587 NM_004717	-48909	-	BC005916 TSC_hg19_v1_chr7_-_137028543 NM_002825 M57399	-551950	-	TSC_hg19_v1_chr7_-_137620668 BC015585	40157	-	NM_001243523	57588	+	AK293048 BC110813 TSC_hg19_v1_chr7_-_137686800 BC063666 AJ549092 AJ549387	106289	-	NM_004717|DGKI|9162|diacylglycerol kinase, iota##BC005916|PTN|5764|pleiotrophin##NM_002825|PTN|5764|pleiotrophin##M57399|PTN|5764|pleiotrophin##BC015585|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_001243523|LOC100130880|100130880|uncharacterized LOC100130880##AK293048|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC110813|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##BC063666|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549092|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AJ549387|CREB3L2|64764|cAMP responsive element binding protein 3-like 2	0.0	
chr8	71554065	71554132	reg1038627.p1	3.761	+	TSC_hg19_v1_chr8_-_71520654 AK303411 NM_014294	-33442	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	-33576	-	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	-238072	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	27286	-	TSC_hg19_v1_chr8_-_71581419 BC000878 BC008505 NM_016027	27351	-	AY534247 BC111381 NM_001011720 BC151845 BC137104 BC137105	27542	+	AK303411|TRAM1|23471|translocation associated membrane protein 1##NM_014294|TRAM1|23471|translocation associated membrane protein 1##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1##NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2##BC000878|LACTB2|51110|lactamase, beta 2##BC008505|LACTB2|51110|lactamase, beta 2##NM_016027|LACTB2|51110|lactamase, beta 2##AY534247|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC111381|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##NM_001011720|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC151845|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137104|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9##BC137105|XKR9|389668|XK, Kell blood group complex subunit-related family, member 9	0.0	
chr9	102016445	102016624	reg1031986.p2	3.761	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-31947	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-32291	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-32317	-	TSC_hg19_v1_chr9_-_102582187 AK057451	565631	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	567623	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	652393	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.0	
chr14	35908141	35908254	reg1033843.p1	3.760	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	-34273	-	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	-146554	+	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	-146626	+	AF260323 NM_032594 BC130377 BC130379 TSC_hg19_v1_chr14_+_36003369 AB037912 AK096639	95112	+	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	369950	-	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	370198	-	BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AF260323|INSM2|84684|insulinoma-associated 2##NM_032594|INSM2|84684|insulinoma-associated 2##BC130377|INSM2|84684|insulinoma-associated 2##BC130379|INSM2|84684|insulinoma-associated 2##AB037912|INSM2|84684|insulinoma-associated 2##AK096639|INSM2|84684|insulinoma-associated 2##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)	0.0	
chr14	51223384	51223564	reg1035576.p2	3.760	+	TSC_hg19_v1_chr14_-_51135048 AK225896 AK095903	-88406	-	BC020537 TSC_hg19_v1_chr14_-_51135025 BC006385 NM_021818 AK021500	-88448	-	AJ292969 AK023071 TSC_hg19_v1_chr14_-_51135016 AK290883	-88534	-	AB046785 TSC_hg19_v1_chr14_-_51297860 BC065521 AF223937 AF223938 AF223939 AF302773 AY736182 NM_016350 NM_020921 NM_182944 NM_182946	74346	-	AY311396 AY311397 AY311398 AY311399 BC107141 NM_001206673 NM_181814 BC107142 AK128464	115404	+	AF046785 AF066858 TSC_hg19_v1_chr14_-_51411202 AK313206 Y15233 AK309333 BC065011 BC110791 BC009895 BC082229 AK225904 AK300580 BC095850 M14636 NM_001163940 NM_002863	187708	-	AK225896|SAV1|60485|salvador homolog 1 (Drosophila)##AK095903|SAV1|60485|salvador homolog 1 (Drosophila)##BC020537|SAV1|60485|salvador homolog 1 (Drosophila)##BC006385|SAV1|60485|salvador homolog 1 (Drosophila)##NM_021818|SAV1|60485|salvador homolog 1 (Drosophila)##AK021500|SAV1|60485|salvador homolog 1 (Drosophila)##AJ292969|SAV1|60485|salvador homolog 1 (Drosophila)##AK023071|SAV1|60485|salvador homolog 1 (Drosophila)##AK290883|SAV1|60485|salvador homolog 1 (Drosophila)##AB046785|NIN|51199|ninein (GSK3B interacting protein)##BC065521|NIN|51199|ninein (GSK3B interacting protein)##AF223937|NIN|51199|ninein (GSK3B interacting protein)##AF223938|NIN|51199|ninein (GSK3B interacting protein)##AF223939|NIN|51199|ninein (GSK3B interacting protein)##AF302773|NIN|51199|ninein (GSK3B interacting protein)##AY736182|NIN|51199|ninein (GSK3B interacting protein)##NM_016350|NIN|51199|ninein (GSK3B interacting protein)##NM_020921|NIN|51199|ninein (GSK3B interacting protein)##NM_182944|NIN|51199|ninein (GSK3B interacting protein)##NM_182946|NIN|51199|ninein (GSK3B interacting protein)##AY311396|ABHD12B|145447|abhydrolase domain containing 12B##AY311397|ABHD12B|145447|abhydrolase domain containing 12B##AY311398|ABHD12B|145447|abhydrolase domain containing 12B##AY311399|ABHD12B|145447|abhydrolase domain containing 12B##BC107141|ABHD12B|145447|abhydrolase domain containing 12B##NM_001206673|ABHD12B|145447|abhydrolase domain containing 12B##NM_181814|ABHD12B|145447|abhydrolase domain containing 12B##BC107142|ABHD12B|145447|abhydrolase domain containing 12B##AK128464|ABHD12B|145447|abhydrolase domain containing 12B##AF046785|PYGL|5836|phosphorylase, glycogen, liver##AF066858|PYGL|5836|phosphorylase, glycogen, liver##AK313206|PYGL|5836|phosphorylase, glycogen, liver##Y15233|PYGL|5836|phosphorylase, glycogen, liver##AK309333|PYGL|5836|phosphorylase, glycogen, liver##BC065011|PYGL|5836|phosphorylase, glycogen, liver##BC110791|PYGL|5836|phosphorylase, glycogen, liver##BC009895|PYGL|5836|phosphorylase, glycogen, liver##BC082229|PYGL|5836|phosphorylase, glycogen, liver##AK225904|PYGL|5836|phosphorylase, glycogen, liver##AK300580|PYGL|5836|phosphorylase, glycogen, liver##BC095850|PYGL|5836|phosphorylase, glycogen, liver##M14636|PYGL|5836|phosphorylase, glycogen, liver##NM_001163940|PYGL|5836|phosphorylase, glycogen, liver##NM_002863|PYGL|5836|phosphorylase, glycogen, liver	0.0	
chr15	74665958	74666025	reg1007120.p1	3.760	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-5988	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-7456	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-55086	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	60038	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	60321	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	87456	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.0	
chr2	98629140	98629320	reg1029064.p1	3.760	+	TSC_hg19_v1_chr2_-_98612395 AK098792	-16827	-	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	-17044	-	AK025852 TSC_hg19_v1_chr2_-_98408976	-220308	-	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	74416	+	DQ426863 NM_001079878 NM_001298 DQ067460	333403	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	333675	+	AK098792|TMEM131|23505|transmembrane protein 131##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##AK025852|TMEM131|23505|transmembrane protein 131##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3	0.0	
chr10	22839456	22839637	reg1008687.p1	3.759	+	TSC_hg19_v1_chr10_+_22726003 AK295718	-113547	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-205090	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-229381	+	AK294817 TSC_hg19_v1_chr10_-_23003038	163491	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	163944	-	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	377435	+	AK295718|LOC100289455|100289455|uncharacterized LOC100289455##NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3	0.0	
chr11	72929556	72929637	reg1033342.p2	3.759	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	-150	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	-252	+	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	-76547	-	AK313942 TSC_hg19_v1_chr11_+_72929608	20	+	NM_176796 NM_176797 AF007891	45980	+	AF007892 AX775903 NM_176798	51342	+	U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176796|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176797|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007891|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AF007892|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##AX775903|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6##NM_176798|P2RY6|5031|pyrimidinergic receptor P2Y, G-protein coupled, 6	0.0	
chr12	40769025	40769140	reg1032684.p1	3.759	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	-150223	+	TSC_hg19_v1_chr12_-_40499870 BC047507	-269210	-	BC117117 BC117119 AJ315644 NM_052885 TSC_hg19_v1_chr12_-_40499763	-269393	-	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	317200	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	813126	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	1062505	+	NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##BC047507|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117117|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##BC117119|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AJ315644|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##NM_052885|SLC2A13|114134|solute carrier family 2 (facilitated glucose transporter), member 13##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4	0.914661	CTCF.p2:-1:0.915
chr15	96164626	96164806	reg1038227.p2	3.759	+	TSC_hg19_v1_chr15_-_95870310 BC040875	-294397	-	NM_001159644 BC025708 BC111024 AK002037	-1265407	+	NM_001159643 NM_018349 AY656717 BC131527	-1323255	+	BC106083 NM_001145155 FM208183	704445	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	709261	+	AK316086 NM_001145156	711077	+	BC040875|LOC400456|400456|uncharacterized LOC400456##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.0	
chr16	6227841	6227986	reg1035807.p2	3.759	+	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	-158688	+	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	-1080145	-	NM_019109 TSC_hg19_v1_chr16_+_5121825 AK075373 BC031095 AB019038 BC004402 AK311475 CU678708 DQ895010 EU176309	-1106083	+	TSC_hg19_v1_chr16_+_6533765 BC033885	305862	+	AK001027 NM_001142334	595896	+	AF094849 AF109106 AF229057 NM_145891 NM_145892 NM_145893	1154837	+	AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##NM_019109|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK075373|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC031095|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AB019038|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC004402|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK311475|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##DQ895010|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##EU176309|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	0.646292	CTCF.p2:49:0.646
chr16	85481021	85481156	reg1041313.p1	3.759	+	BC093665 BC111944 AK126284 NM_198491	-335034	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-419718	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-435959	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	163933	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	165865	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	241454	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.013372	
chr2	212368728	212368805	reg1038017.p1	3.759	+	AK316425 NM_001122634 AK302778 AY317138	-910681	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-947377	+	NM_001122633 AB208800	-1026348	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	1034549	-	AK301503 AF130863 NM_016260	1646289	-	BC028936 NM_001079526	1647566	-	AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122633|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB208800|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)	1.444006	CTCF.p2:2:0.984	CTCF.p2:94:0.460
chr22	51066021	51066109	reg1028775.p1	3.759	+	AF218778 NM_016431	-24504	+	TSC_hg19_v1_chr22_+_51039227 AK293580 BC047527 BC009940 AK294265 BC037271 CU679535 EU832803 GQ129402	-26853	+	TSC_hg19_v1_chr22_+_51039124 AF136382 NM_012324	-26936	+	TSC_hg19_v1_chr22_-_51066581 AK092752 X52151 BX648618 BC014210 AK098659 AB448736 AK301098 AK315011 NM_000487 NM_001085425 NM_001085426 NM_001085427 NM_001085428	469	-	AB569469 NM_001080420	47004	+	AK310316 Y00970 NM_001097 CR456366 AB587466 CU012933 CU013221	110578	+	AF218778|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##NM_016431|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AK293580|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##BC047527|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##BC009940|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AK294265|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##BC037271|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##EU832803|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##GQ129402|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AF136382|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##NM_012324|MAPK8IP2|23542|mitogen-activated protein kinase 8 interacting protein 2##AK092752|ARSA|410|arylsulfatase A##X52151|ARSA|410|arylsulfatase A##BX648618|ARSA|410|arylsulfatase A##BC014210|ARSA|410|arylsulfatase A##AK098659|ARSA|410|arylsulfatase A##AB448736|ARSA|410|arylsulfatase A##AK301098|ARSA|410|arylsulfatase A##AK315011|ARSA|410|arylsulfatase A##NM_000487|ARSA|410|arylsulfatase A##NM_001085425|ARSA|410|arylsulfatase A##NM_001085426|ARSA|410|arylsulfatase A##NM_001085427|ARSA|410|arylsulfatase A##NM_001085428|ARSA|410|arylsulfatase A##AB569469|SHANK3|85358|SH3 and multiple ankyrin repeat domains 3##NM_001080420|SHANK3|85358|SH3 and multiple ankyrin repeat domains 3##AK310316|ACR|49|acrosin##Y00970|ACR|49|acrosin##NM_001097|ACR|49|acrosin##CR456366|ACR|49|acrosin##CU012933|ACR|49|acrosin##CU013221|ACR|49|acrosin	0.023351	
chr5	133978850	133978987	reg1036381.p2	3.759	+	BC002847 TSC_hg19_v1_chr5_-_133968519 AK223452 AF092130 BC093034 NM_001033503 NM_016103	-10421	-	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	-117113	+	TSC_hg19_v1_chr5_+_133861359 AK056471 BC021962 AK292635 AK074123	-117555	+	TSC_hg19_v1_chr5_+_133984493 AK304060 NM_001252231 NM_021982 BC019341	5513	+	TSC_hg19_v1_chr5_+_134074237 NM_001745 BC130325 AK313156 BC063532 U18242 AB590695 HQ258172 AF068179	95392	+	NM_014829 TSC_hg19_v1_chr5_+_134094470 AK126011 AK291788 BC105598 AF106680 AB018344 BC012304 CU680282	115625	+	BC002847|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK223452|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AF092130|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##BC093034|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_001033503|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_016103|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15##AK056471|PHF15|23338|PHD finger protein 15##BC021962|PHF15|23338|PHD finger protein 15##AK292635|PHF15|23338|PHD finger protein 15##AK074123|PHF15|23338|PHD finger protein 15##AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001252231|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001745|CAMLG|819|calcium modulating ligand##BC130325|CAMLG|819|calcium modulating ligand##AK313156|CAMLG|819|calcium modulating ligand##BC063532|CAMLG|819|calcium modulating ligand##U18242|CAMLG|819|calcium modulating ligand##HQ258172|CAMLG|819|calcium modulating ligand##AF068179|CAMLG|819|calcium modulating ligand##NM_014829|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AK126011|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AK291788|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##BC105598|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AF106680|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##AB018344|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46##BC012304|DDX46|9879|DEAD (Asp-Glu-Ala-Asp) box polypeptide 46	0.0	
chr7	72649653	72649831	reg1024043.p2	3.759	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	-80711	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-224500	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-252868	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	73082	-	AK057366 AY081948 AY081949 NM_178125	92342	-	NM_001135211 AK302121 NM_003602 AK310255 BC036817 AF038847 CU691432 EU176233 EU176537 GQ129339 GQ129340	92550	+	BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50##NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa##AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa##NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa##AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa##BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa##AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa	0.0	
chr8	113819173	113819285	reg1044033.p1	3.759	+	BC028739 AK313469 AF167082 NM_014379 AK297393	-2832263	-	NM_001099743 NM_001099744	-3115210	-	AK290469 NM_001099745 NM_001099746	-3125996	-	AB114605 NM_198124	570152	-	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	629900	-	TSC_hg19_v1_chr8_-_116680208 AK304046	2860991	-	BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##NM_001099743|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099744|SYBU|55638|syntabulin (syntaxin-interacting)##AK290469|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099745|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099746|SYBU|55638|syntabulin (syntaxin-interacting)##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I	0.546444	CTCF.p2:9:0.546
chr9	33167584	33167664	reg1031951.p1	3.759	+	NM_001497 TSC_hg19_v1_chr9_-_33167361	-263	-	TSC_hg19_v1_chr9_-_33167335 BC045773	-298	-	D29805 X13223 X14085 M22921 U10474 TSC_hg19_v1_chr9_-_33167262	-377	-	TSC_hg19_v1_chr9_+_33240166 AF048700 BC110068 NM_014471	72556	+	AM392568 BC014774 TSC_hg19_v1_chr9_-_33264707 AK096038 AK316577 AF116273 BC002407 AK222749 AF022224 U46917 BC001936 Z35491 NM_001172415 NM_004323	96984	-	NM_001195536 NM_016410 TSC_hg19_v1_chr9_+_33265035 BC016698 BC007457 AK315455 AK024753 BC018603 BC021168 AK295744	97332	+	NM_001497|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##BC045773|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##D29805|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X13223|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X14085|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##M22921|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##U10474|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AF048700|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##BC110068|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##NM_014471|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##AM392568|BAG1|573|BCL2-associated athanogene##BC014774|BAG1|573|BCL2-associated athanogene##AK096038|BAG1|573|BCL2-associated athanogene##AK316577|BAG1|573|BCL2-associated athanogene##AF116273|BAG1|573|BCL2-associated athanogene##AK222749|BAG1|573|BCL2-associated athanogene##AF022224|BAG1|573|BCL2-associated athanogene##U46917|BAG1|573|BCL2-associated athanogene##BC001936|BAG1|573|BCL2-associated athanogene##Z35491|BAG1|573|BCL2-associated athanogene##NM_001172415|BAG1|573|BCL2-associated athanogene##NM_004323|BAG1|573|BCL2-associated athanogene##NM_001195536|CHMP5|51510|charged multivesicular body protein 5##NM_016410|CHMP5|51510|charged multivesicular body protein 5##BC016698|CHMP5|51510|charged multivesicular body protein 5##BC007457|CHMP5|51510|charged multivesicular body protein 5##AK315455|CHMP5|51510|charged multivesicular body protein 5##AK024753|CHMP5|51510|charged multivesicular body protein 5##BC018603|CHMP5|51510|charged multivesicular body protein 5##BC021168|CHMP5|51510|charged multivesicular body protein 5##AK295744|CHMP5|51510|charged multivesicular body protein 5	0.221192	CTCF.p2:13:0.221
chr1	115579946	115580126	reg1038127.p1	3.758	+	NM_000549	-7622	+	NM_003176 BC026162 AK315268 AF273043 BC105299 BC126266 BC144019 BC144020 BC065190 X95654	-182524	+	TSC_hg19_v1_chr1_-_115323268 BC005934 AK024821 AK225734 CR749219 CR936771 AK126316 NM_001102396 NM_025073	-256741	-	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	52080	-	BC032517 NM_002506 X52599	300817	-	NM_001172411 NM_138959 BC065272 AF481859	604556	+	NM_000549|TSHB|7252|thyroid stimulating hormone, beta##NM_003176|SYCP1|6847|synaptonemal complex protein 1##BC026162|SYCP1|6847|synaptonemal complex protein 1##AK315268|SYCP1|6847|synaptonemal complex protein 1##AF273043|SYCP1|6847|synaptonemal complex protein 1##BC105299|SYCP1|6847|synaptonemal complex protein 1##BC126266|SYCP1|6847|synaptonemal complex protein 1##BC144019|SYCP1|6847|synaptonemal complex protein 1##BC144020|SYCP1|6847|synaptonemal complex protein 1##BC065190|SYCP1|6847|synaptonemal complex protein 1##X95654|SYCP1|6847|synaptonemal complex protein 1##BC005934|SIKE1|80143|suppressor of IKBKE 1##AK024821|SIKE1|80143|suppressor of IKBKE 1##AK225734|SIKE1|80143|suppressor of IKBKE 1##CR749219|SIKE1|80143|suppressor of IKBKE 1##CR936771|SIKE1|80143|suppressor of IKBKE 1##AK126316|SIKE1|80143|suppressor of IKBKE 1##NM_001102396|SIKE1|80143|suppressor of IKBKE 1##NM_025073|SIKE1|80143|suppressor of IKBKE 1##AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)##NM_001172411|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##NM_138959|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##BC065272|VANGL1|81839|vang-like 1 (van gogh, Drosophila)##AF481859|VANGL1|81839|vang-like 1 (van gogh, Drosophila)	0.0	
chr14	107218554	107218648	reg1037376.p1	3.758	+	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	-7300	-	JF810265 DQ454799 FJ840007 FJ840015 DQ454561 DQ454955 DQ454612 DQ454663 DQ454685 FJ840092 FJ840295 FJ873837 AJ008218 JF810272 JF810273 AY003862 AJ132562 Y08732 AF103327 EU099062 EU620029 GQ504979 HQ392897 AF103116 AF103087 AF103100 HM774925 JN110942 HM774229 FJ385350 GQ504960 HM774112 HM774402 HM774448 HM774462 HM774524 HM774766 HM775010 AF103135 HM774927 HM774932 HM774189 U00529 Y14940 AF103057 AF103351 EU146338 L03141 L03153 AF029328 AF485459 DQ431489 L03143 L03173 L03177 AF035801 AY423195 AY423198 AY423206 DQ431488 DQ431492 HM995020 DQ431490 GU570297 HM152513 HM994969 HM994972 HM994977 HM994978 HM994981 HM994982 HM994989 HM995522 HM995532 HM996141 HM996526 DQ187603 DQ187629 DQ322887 DQ322888 DQ322889 DQ322890 DQ322960 DQ840663 DQ840674 DQ840675 DQ840677 DQ840678 DQ840680 DQ840681 DQ840682 DQ840683 DQ840687 DQ840758 DQ840769 DQ840770 DQ840771 DQ840773 DQ840781 DQ840844 DQ840857 DQ840859 DQ840860 DQ840863 DQ840910 DQ840917 DQ840918 AF021973 AF048774 AF115122 AF151702 AF174111 AJ238039 AJ579199 AJ579279 AY866726 AY866767 DQ100754 DQ100773 DQ100787 DQ100849 DQ100977 DQ840729 DQ926055 DQ926218 DQ926255 DQ926308 EF177956 EF178021 GQ267831 U96395 X99352 Y17142 AB063699 AB063849 AB063916 AB067258 AB363156 AF021945 AF129753 AF471200 AF471528 AF471540 AF471541 AF471542 AF471546 AJ300788 AJ389185 AJ556647 AJ556667 AJ579161 AY554174 AY554177 AY554178 AY573190 AY640527 AY640562 AY846273 AY971106 D83679 DQ065693 DQ535269 DQ535318 DQ535335 DQ535453 DQ535464 DQ535482 DQ926153 DQ926492 EF178117 EF178127 EF178131 EU835555 FJ195515 FJ492899 FN563769 GU570345 GU570350 HQ378386 JF806284 U97244 X99353 L33033 Z11950 BC033178 TSC_hg19_v1_chr14_-_107199472	-19301	-	FJ840101 FJ840103 FJ840105 FJ840106 FJ840110 FJ840116 FJ840119 FJ840153 FJ840184 FJ840185 FJ840188 FJ840189 FJ840190 FJ840192 FJ840197 FJ840199 FJ840203 FJ840206 FJ840207 FJ840208 FJ840209 FJ873863 FJ873875 FJ873894 FJ873921 FJ873929 FJ873938 FJ873947 FJ873950 FJ873952 FJ873965 FJ873977 FJ873996 FJ873997 FJ873999 FJ874008 FJ874014 FJ874026 FJ874040 FJ874044 FJ874061 FJ874068 FJ874078 FJ874079 FJ874080 HM116116 HM116121 HM116146 HM116172 HM116181 HM116193 HM116196 HM116197 HM116201 HM116225 GQ232804 GQ232899 AY003747 AY392896 AY393031 AY393032 AY393052 AY393293 AY393389 AY393434 AY393562 AF103042 AF459629 HM774620 HM774632 AM183987 AM279526 AY312400 EF177989 DQ926546 AJ389183 DQ100956 DQ926096 U00507 AB066845 AB066846 AB066847 AB066848 AB066849 AB066853 AB066854 AB066855 AB066856 AB066860 AB066863 AB066867 AB066872 AB066875 AB066876 AB067169 AB067183 AB067187 AB067188 AB067191 AB067197 AB067198 AB067200 AB067201 AB067203 AB067204 AB067205 AB067206 AB067207 AB067208 AB067209 AB067210 AB067211 AB067212 AB067213 AB067215 AB067216 AB067217 AB067219 AB067220 AB067227 AB067230 AF062247 AF174045 AF174063 AF174117 AF442758 AJ239338 AJ239347 AJ389184 AY781820 AY941845 DQ926224 DQ926451 FJ385297 GU570281 GU570282 HQ378332 U00575 U77371 X79160 Z80836 DQ535270 DQ535432 L28050 M34027 AF062153 AJ131058 AY190826 L21960 TSC_hg19_v1_chr14_-_107179280 AK097955	-39411	-	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	397	-	DQ205161 AY392971 AF085654 X58399 X58398 BC002792 TSC_hg19_v1_chr14_-_107259820	41119	-	None	None	None	AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC033178|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK097955|IGHA1|3493|immunoglobulin heavy constant alpha 1##Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu##X58399|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##X58398|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##BC002792|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)	0.153526	
chr17	10018788	10018919	reg1037130.p2	3.758	+	TSC_hg19_v1_chr17_-_9940004 AK057761 BC006454 NM_201432	-78820	-	TSC_hg19_v1_chr17_-_9939883 AK292987	-78975	-	TSC_hg19_v1_chr17_-_9929603 AB007854 AK225165 AK299574 NM_001130831	-89232	-	TSC_hg19_v1_chr17_-_10101924 AY327406 NM_201433	83053	-	AF111782 NM_003802	257468	-	AK303395 NM_002472	306413	-	AK057761|GAS7|8522|growth arrest-specific 7##BC006454|GAS7|8522|growth arrest-specific 7##NM_201432|GAS7|8522|growth arrest-specific 7##AK292987|GAS7|8522|growth arrest-specific 7##AB007854|GAS7|8522|growth arrest-specific 7##AK225165|GAS7|8522|growth arrest-specific 7##AK299574|GAS7|8522|growth arrest-specific 7##NM_001130831|GAS7|8522|growth arrest-specific 7##AY327406|GAS7|8522|growth arrest-specific 7##NM_201433|GAS7|8522|growth arrest-specific 7##AF111782|MYH13|8735|myosin, heavy chain 13, skeletal muscle##NM_003802|MYH13|8735|myosin, heavy chain 13, skeletal muscle##AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	0.0	
chr17	5130702	5130883	reg1032525.p1	3.758	+	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-35412	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-35619	-	AY143550 NM_004505 X63546 X63547	-99106	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	7309	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	54874	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	192133	-	AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##AY143550|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##NM_004505|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63546|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63547|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa	0.0	
chr1	84713103	84713283	reg1029267.p1	3.758	+	AK316115 NM_001242862	-65851	+	AY927366 AY927367 AY927368 AK091420 AX746972 NM_001242860 NM_001242861	-82582	+	TSC_hg19_v1_chr1_+_84630376 BX647515 AB209189	-82813	+	AK056937 NM_001010971	50855	+	NM_001134663 AK311207	54120	+	BC037973 NM_001134664	55140	+	AK316115|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_001242862|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AY927366|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AY927367|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AY927368|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK091420|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_001242860|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##NM_001242861|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##BX647515|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AB209189|PRKACB|5567|protein kinase, cAMP-dependent, catalytic, beta##AK056937|SAMD13|148418|sterile alpha motif domain containing 13##NM_001010971|SAMD13|148418|sterile alpha motif domain containing 13##NM_001134663|SAMD13|148418|sterile alpha motif domain containing 13##BC037973|SAMD13|148418|sterile alpha motif domain containing 13##NM_001134664|SAMD13|148418|sterile alpha motif domain containing 13	0.0	
chr21	47238904	47239084	reg1025763.p2	3.758	+	TSC_hg19_v1_chr21_+_47063638 AK310131	-175365	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	-276662	-	AK303168 NM_001205207	-284460	-	AF176329 NM_001130141 NM_020528 BC012061 AK310672	30894	+	TSC_hg19_v1_chr21_+_47401683 NM_001848 BC052575 AK298968 AK299396 AK307989 BC032821 X15879	162691	+	TSC_hg19_v1_chr21_+_47518062 NM_001849 NM_058174 NM_058175 BC065509	279056	+	AK310131|PCBP3|54039|poly(rC) binding protein 3##U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3##NM_001848|COL6A1|1291|collagen, type VI, alpha 1##BC052575|COL6A1|1291|collagen, type VI, alpha 1##AK298968|COL6A1|1291|collagen, type VI, alpha 1##AK299396|COL6A1|1291|collagen, type VI, alpha 1##AK307989|COL6A1|1291|collagen, type VI, alpha 1##BC032821|COL6A1|1291|collagen, type VI, alpha 1##X15879|COL6A1|1291|collagen, type VI, alpha 1##NM_001849|COL6A2|1292|collagen, type VI, alpha 2##NM_058174|COL6A2|1292|collagen, type VI, alpha 2##NM_058175|COL6A2|1292|collagen, type VI, alpha 2##BC065509|COL6A2|1292|collagen, type VI, alpha 2	0.0	
chr2	208490224	208490320	reg1030616.p1	3.758	+	TSC_hg19_v1_chr2_-_208490039 BC009462 AF455817	-189	-	NM_001127395 TSC_hg19_v1_chr2_-_208489987	-283	-	AK093812 AX748320 BC033720 NM_145280	-577	-	TSC_hg19_v1_chr2_+_208576363 AK097751 NM_001142300 NM_152523	86029	+	TSC_hg19_v1_chr2_+_208576365 BC047293	86123	+	TSC_hg19_v1_chr2_+_208576466 BC067253	86228	+	BC009462|METTL21A|151194|methyltransferase like 21A##AF455817|METTL21A|151194|methyltransferase like 21A##NM_001127395|METTL21A|151194|methyltransferase like 21A##AK093812|METTL21A|151194|methyltransferase like 21A##BC033720|METTL21A|151194|methyltransferase like 21A##NM_145280|METTL21A|151194|methyltransferase like 21A##AK097751|CCNYL1|151195|cyclin Y-like 1##NM_001142300|CCNYL1|151195|cyclin Y-like 1##NM_152523|CCNYL1|151195|cyclin Y-like 1##BC047293|CCNYL1|151195|cyclin Y-like 1##BC067253|CCNYL1|151195|cyclin Y-like 1	0.0	
chr2	236044855	236044973	reg1009500.p2	3.758	+	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	-184256	+	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	-639195	-	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-1085527	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	357889	+	TSC_hg19_v1_chr2_+_236402950 BC140856	358063	+	TSC_hg19_v1_chr2_+_236403297 AB384114 AF413078	358396	+	BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AF413078|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.0	
chr3	183543497	183543611	reg1035393.p1	3.758	+	TSC_hg19_v1_chr3_-_183543366 BC006434 AK022810 NM_024871	-185	-	TSC_hg19_v1_chr3_+_183415597 AB033023 BC150273 NM_018023	-127932	+	BC142993 TSC_hg19_v1_chr3_+_183353410 AK026326 AY422472 BX648466 BX648812 NM_017644	-190154	+	AF197937 CU678558 DQ893442 DQ896749 TSC_hg19_v1_chr3_-_183602641	59085	-	TSC_hg19_v1_chr3_-_183602648 BC014058	59097	-	TSC_hg19_v1_chr3_-_183602663 AK024765	59108	-	BC006434|MAP6D1|79929|MAP6 domain containing 1##AK022810|MAP6D1|79929|MAP6 domain containing 1##NM_024871|MAP6D1|79929|MAP6 domain containing 1##AB033023|YEATS2|55689|YEATS domain containing 2##BC150273|YEATS2|55689|YEATS domain containing 2##NM_018023|YEATS2|55689|YEATS domain containing 2##BC142993|KLHL24|54800|kelch-like 24 (Drosophila)##AK026326|KLHL24|54800|kelch-like 24 (Drosophila)##AY422472|KLHL24|54800|kelch-like 24 (Drosophila)##BX648466|KLHL24|54800|kelch-like 24 (Drosophila)##BX648812|KLHL24|54800|kelch-like 24 (Drosophila)##NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)##AF197937|PARL|55486|presenilin associated, rhomboid-like##DQ893442|PARL|55486|presenilin associated, rhomboid-like##DQ896749|PARL|55486|presenilin associated, rhomboid-like##BC014058|PARL|55486|presenilin associated, rhomboid-like##AK024765|PARL|55486|presenilin associated, rhomboid-like	1.000209	CTCF.p2:17:0.925
chr5	58109205	58109313	reg1035126.p1	3.758	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	-230340	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	-321965	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	-353323	-	BC036319 NM_001197223	186499	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	226119	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	462671	-	AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.0	
chr6	37128949	37129022	reg1031474.p1	3.758	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-155484	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-174715	-	AK022783 TSC_hg19_v1_chr6_-_36953950 AF176006 AF192559 BC125055 BC153873 NM_014341 BC110914	-175008	-	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	9137	+	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	96401	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	96614	+	BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##AK022783|MTCH1|23787|mitochondrial carrier 1##AF176006|MTCH1|23787|mitochondrial carrier 1##AF192559|MTCH1|23787|mitochondrial carrier 1##BC125055|MTCH1|23787|mitochondrial carrier 1##BC153873|MTCH1|23787|mitochondrial carrier 1##NM_014341|MTCH1|23787|mitochondrial carrier 1##BC110914|MTCH1|23787|mitochondrial carrier 1##NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B	0.0	
chrX	115015149	115015239	reg1013919.p2	3.758	+	NM_001136025 NM_001172335 AK298530 AK300575 BC039049	-187326	+	TSC_hg19_v1_chrX_-_114797027 AK127380	-218152	-	TSC_hg19_v1_chrX_+_114795522 AK298501 AK311397 AK312391 M34427 AK222801 AK311211 AK294509	-219588	+	BC003645 TSC_hg19_v1_chrX_-_115085443	70245	-	AK313927 NM_000686 X87723 U16957	286801	+	AK313390 NM_007231 TSC_hg19_v1_chrX_+_115567773 AK304243 AF151978	552573	+	NM_001136025|PLS3|5358|plastin 3##NM_001172335|PLS3|5358|plastin 3##AK298530|PLS3|5358|plastin 3##AK300575|PLS3|5358|plastin 3##BC039049|PLS3|5358|plastin 3##AK298501|PLS3|5358|plastin 3##AK311397|PLS3|5358|plastin 3##AK312391|PLS3|5358|plastin 3##M34427|PLS3|5358|plastin 3##AK222801|PLS3|5358|plastin 3##AK311211|PLS3|5358|plastin 3##AK294509|PLS3|5358|plastin 3##BC003645|LOC642776|642776|uncharacterized LOC642776##AK313927|AGTR2|186|angiotensin II receptor, type 2##NM_000686|AGTR2|186|angiotensin II receptor, type 2##X87723|AGTR2|186|angiotensin II receptor, type 2##U16957|AGTR2|186|angiotensin II receptor, type 2##AK313390|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##NM_007231|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AK304243|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14##AF151978|SLC6A14|11254|solute carrier family 6 (amino acid transporter), member 14	0.311276	CTCF.p2:-8:0.311
chrX	44733178	44733348	reg1040563.p2	3.758	+	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	-827	+	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	-29950	+	TSC_hg19_v1_chrX_-_44402101 BC035015 BC042813 NM_173794	-331109	-	BC035375 AY358764 TSC_hg19_v1_chrX_-_45060106 BC137528 BC137529 AK024165 NM_024689 NM_176819	326850	-	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	1573448	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	1671593	-	NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##BC035015|FUNDC1|139341|FUN14 domain containing 1##BC042813|FUNDC1|139341|FUN14 domain containing 1##NM_173794|FUNDC1|139341|FUN14 domain containing 1##BC035375|CXorf36|79742|chromosome X open reading frame 36##AY358764|CXorf36|79742|chromosome X open reading frame 36##BC137528|CXorf36|79742|chromosome X open reading frame 36##BC137529|CXorf36|79742|chromosome X open reading frame 36##AK024165|CXorf36|79742|chromosome X open reading frame 36##NM_024689|CXorf36|79742|chromosome X open reading frame 36##NM_176819|CXorf36|79742|chromosome X open reading frame 36##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674	0.043577	
chr2	105593439	105593561	reg1035856.p2	3.757	+	TSC_hg19_v1_chr2_+_105471877 NM_006236	-121602	+	TSC_hg19_v1_chr2_-_105467912 AK096498	-125584	-	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	-2214918	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	61014	+	BC066879 BC066880 BC067455 NM_007227 CU688176 EU883573	264757	+	TSC_hg19_v1_chr2_-_105946156 BC020548 BC010093 NM_001142621 NM_004257	352652	-	NM_006236|POU3F3|5455|POU class 3 homeobox 3##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9##BC066879|GPR45|11250|G protein-coupled receptor 45##BC066880|GPR45|11250|G protein-coupled receptor 45##BC067455|GPR45|11250|G protein-coupled receptor 45##NM_007227|GPR45|11250|G protein-coupled receptor 45##EU883573|GPR45|11250|G protein-coupled receptor 45##BC020548|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_001142621|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1##NM_004257|TGFBRAP1|9392|transforming growth factor, beta receptor associated protein 1	0.020784	
chr2	109225525	109225678	reg1036378.p1	3.757	+	TSC_hg19_v1_chr2_+_109223602 AF527762 NM_001193482	-1984	+	TSC_hg19_v1_chr2_+_109204921 BC005341 NM_001193488	-20632	+	TSC_hg19_v1_chr2_+_109204792 AF527763	-20816	+	TSC_hg19_v1_chr2_+_109237706 AK304260 NM_001193484 AF527760 AK310547	12102	+	AF527759 NM_001193485	45666	+	TSC_hg19_v1_chr2_+_109271492 AK302411 AK312178	45887	+	AF527762|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193482|LIMS1|3987|LIM and senescent cell antigen-like domains 1##BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK304260|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193484|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527760|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK310547|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3	0.0	
chr2	189630372	189630493	reg1038426.p2	3.757	+	TSC_hg19_v1_chr2_+_189157557 BC068525 AF191771 AF200715 AF075014	-472851	+	TSC_hg19_v1_chr2_+_189156740 AK298626	-473684	+	TSC_hg19_v1_chr2_+_189156656 BC001103	-473770	+	AY039011 NM_052952	24398	-	TSC_hg19_v1_chr2_+_189839098 AK308010 NM_000090 BC028178	208662	+	X14420 BX649097 TSC_hg19_v1_chr2_+_189839117	208686	+	BC068525|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AF191771|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AF200715|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AF075014|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AK298626|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##BC001103|GULP1|51454|GULP, engulfment adaptor PTB domain containing 1##AY039011|DIRC1|116093|disrupted in renal carcinoma 1##NM_052952|DIRC1|116093|disrupted in renal carcinoma 1##AK308010|COL3A1|1281|collagen, type III, alpha 1##NM_000090|COL3A1|1281|collagen, type III, alpha 1##BC028178|COL3A1|1281|collagen, type III, alpha 1##X14420|COL3A1|1281|collagen, type III, alpha 1	0.264337	CTCF.p2:4:0.264
chr3	184802772	184802901	reg1034979.p1	3.757	+	TSC_hg19_v1_chr3_+_184529983 BC140768	-272841	+	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	-272913	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	-373073	-	TSC_hg19_v1_chr3_-_184870632 BC137178 BC137179 BC150565	67817	-	TSC_hg19_v1_chr3_-_184870849 AK091454 AX746993 NM_001025266	67962	-	BC038948 BC110460 L07077 AK301521 TSC_hg19_v1_chr3_-_184971838 AK223460 AK291798 BC011030 BC030982 NM_001166415 NM_001966	169014	-	BC140768|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##BC137178|C3orf70|285382|chromosome 3 open reading frame 70##BC137179|C3orf70|285382|chromosome 3 open reading frame 70##BC150565|C3orf70|285382|chromosome 3 open reading frame 70##NM_001025266|C3orf70|285382|chromosome 3 open reading frame 70##BC038948|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC110460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##L07077|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK301521|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK223460|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##AK291798|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC011030|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##BC030982|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001166415|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase##NM_001966|EHHADH|1962|enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase	0.758045	CTCF.p2:7:0.758
chr4	2010702	2010794	reg1036528.p1	3.757	+	TSC_hg19_v1_chr4_-_2010702 AK001304	-23	-	AB044549 CU678178 EU831413 EU831506 AF101434 AK094040 TSC_hg19_v1_chr4_-_2010700 AK222853 BC002764	-55	-	AB029013 TSC_hg19_v1_chr4_+_1953907	-56878	+	NM_005663	213	-	NM_001168243 TSC_hg19_v1_chr4_+_2043732 BC062790 BC038466 BC047038 NM_001141936	33010	+	NM_178557	50490	+	AK001304|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AB044549|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##EU831413|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##EU831506|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AF101434|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AK094040|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AK222853|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##BC002764|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##AB029013|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_005663|WHSC2|7469|Wolf-Hirschhorn syndrome candidate 2##NM_001168243|C4orf48|401115|chromosome 4 open reading frame 48##BC062790|C4orf48|401115|chromosome 4 open reading frame 48##BC038466|C4orf48|401115|chromosome 4 open reading frame 48##BC047038|C4orf48|401115|chromosome 4 open reading frame 48##NM_001141936|C4orf48|401115|chromosome 4 open reading frame 48##NM_178557|NAT8L|339983|N-acetyltransferase 8-like (GCN5-related, putative)	0.029768	
chr5	81652759	81652854	reg1032373.p1	3.757	+	BC093982 BC112191 NM_001017971	-51641	+	TSC_hg19_v1_chr5_-_81574219 NM_001025	-78587	-	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	-78635	-	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	720391	-	TSC_hg19_v1_chr5_-_82373255 NM_174909	720456	-	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	720577	+	BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001025|RPS23|6228|ribosomal protein S23##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##NM_174909|TMEM167A|153339|transmembrane protein 167A##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4	0.0	
chr9	136321767	136321860	reg1033588.p2	3.757	+	TSC_hg19_v1_chr9_+_136293730 AJ011374	-28073	+	AJ305314 AJ420810 AJ420811 BC103828 BC103829 BC103830 AY055376 TSC_hg19_v1_chr9_+_136287508 AF414401	-34336	+	AB069698 NM_139025 NM_139026 NM_139027 AK292439	-34681	+	NM_001135775 NM_001242369 NM_001242370 NM_017586 AK075416 TSC_hg19_v1_chr9_+_136325120 AK304524 AK074852 AK311325 AK296343 AK075548 BC030558 AJ011373 AY358452 AK298820 CU688906	3326	+	DQ891513 DQ894704 AK294974 BC013740 TSC_hg19_v1_chr9_-_136344222 AJ011372 AK225106 AK222919 AK074836 AK096630 Y17803 AK074927 NM_001145099 NM_017585	22415	-	NM_001080483	68254	-	AJ011374|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ305314|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ420810|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ420811|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103828|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103829|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103830|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AY055376|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AF414401|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AB069698|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_139025|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_139026|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_139027|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AK292439|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_001135775|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242369|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242370|C9orf7|11094|chromosome 9 open reading frame 7##NM_017586|C9orf7|11094|chromosome 9 open reading frame 7##AK075416|C9orf7|11094|chromosome 9 open reading frame 7##AK304524|C9orf7|11094|chromosome 9 open reading frame 7##AK074852|C9orf7|11094|chromosome 9 open reading frame 7##AK311325|C9orf7|11094|chromosome 9 open reading frame 7##AK296343|C9orf7|11094|chromosome 9 open reading frame 7##AK075548|C9orf7|11094|chromosome 9 open reading frame 7##BC030558|C9orf7|11094|chromosome 9 open reading frame 7##AJ011373|C9orf7|11094|chromosome 9 open reading frame 7##AY358452|C9orf7|11094|chromosome 9 open reading frame 7##AK298820|C9orf7|11094|chromosome 9 open reading frame 7##DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001080483|TMEM8C|389827|transmembrane protein 8C	0.0	
chr18	42862463	42862573	reg1039446.p1	3.756	+	NM_001242692 AK292422	-69566	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-601650	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-602404	+	AF349446 NM_007163	332247	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	441586	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	441639	+	NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.340509	CTCF.p2:34:0.329
chr20	62359822	62359952	reg1038088.p1	3.756	+	TSC_hg19_v1_chr20_+_62339419 NM_001195653 NM_001195654 NM_032527 NM_181485 AK074961 AK122912 AK314726 BC032612 BC019338 AK307368 AK027878	-20491	+	TSC_hg19_v1_chr20_-_62339374 BC010068 NM_001134758 NM_003224	-20541	-	TSC_hg19_v1_chr20_-_62339259 BC092480 BC021023 BC093967 BC143447 BC143448 BC143467 BC143472 BC143477	-20648	-	TSC_hg19_v1_chr20_+_62368015 NM_017806 AK000413	8095	+	TSC_hg19_v1_chr20_+_62368035 BC017016	8153	+	TSC_hg19_v1_chr20_+_62371128 BC052306 AB052777 NM_020062	11273	+	NM_001195653|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##NM_001195654|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##NM_032527|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##NM_181485|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##AK074961|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##AK314726|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##BC032612|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##BC019338|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##AK027878|ZGPAT|84619|zinc finger, CCCH-type with G patch domain##NM_001134758|ARFRP1|10139|ADP-ribosylation factor related protein 1##NM_003224|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC092480|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC021023|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC093967|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143447|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143448|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143467|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143472|ARFRP1|10139|ADP-ribosylation factor related protein 1##BC143477|ARFRP1|10139|ADP-ribosylation factor related protein 1##NM_017806|LIME1|54923|Lck interacting transmembrane adaptor 1##AK000413|LIME1|54923|Lck interacting transmembrane adaptor 1##BC017016|LIME1|54923|Lck interacting transmembrane adaptor 1##BC052306|SLC2A4RG|56731|SLC2A4 regulator##AB052777|SLC2A4RG|56731|SLC2A4 regulator##NM_020062|SLC2A4RG|56731|SLC2A4 regulator	0.0	
chr2	111917537	111917652	reg1036230.p2	3.756	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	-39107	+	AK300513 NM_001142807 BC022268	-427415	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-481772	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	724032	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	724167	-	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	738591	+	AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase	0.020343	
chr3	23336401	23336582	reg1037701.p1	3.756	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	-91736	+	TSC_hg19_v1_chr3_+_23244600 AK307075	-91908	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-922357	-	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	510919	+	AK314854 TSC_hg19_v1_chr3_+_23847474	510983	+	AK295354 NM_001202476	515442	+	AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK310298|ZNF385D|79750|zinc finger protein 385D##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##AK314854|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_001202476|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.0	
chr5	14143044	14143178	reg1033281.p2	3.756	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-131241	-	AX800026 AY045575 NM_001369	-198523	-	TSC_hg19_v1_chr5_-_11904184 AK296232	-2238927	-	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	561	+	TSC_hg19_v1_chr5_+_14488527 AK131423	345428	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	438789	+	AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK296232|CTNND2|1501|catenin (cadherin-associated protein), delta 2 (neural plakophilin-related arm-repeat protein)##NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A	0.026111	
chr6	27280177	27280274	reg1014332.p1	3.756	+	NM_033482	-215	-	AK097918 AK314037 NM_005865 AF052514 AK303106 AB590521	-64729	+	BC093849 BC093851 TSC_hg19_v1_chr6_+_27114884 AK312232 AB528147 BC134366 BC148293 NM_080596	-165342	+	AF352327 AF336874 BC107050 NM_032030	12333	+	TSC_hg19_v1_chr6_+_27356537 NM_001076781 AK092633 AK294965 AX747641 BC132797	76330	+	TSC_hg19_v1_chr6_-_27440879 BC022992 AK123011 AK312804 NM_007149	160476	-	NM_033482|POM121L2|94026|POM121 membrane glycoprotein-like 2##AK097918|PRSS16|10279|protease, serine, 16 (thymus)##AK314037|PRSS16|10279|protease, serine, 16 (thymus)##NM_005865|PRSS16|10279|protease, serine, 16 (thymus)##AF052514|PRSS16|10279|protease, serine, 16 (thymus)##AK303106|PRSS16|10279|protease, serine, 16 (thymus)##BC093849|HIST1H2AH|85235|histone cluster 1, H2ah##BC093851|HIST1H2AH|85235|histone cluster 1, H2ah##AK312232|HIST1H2AH|85235|histone cluster 1, H2ah##BC134366|HIST1H2AH|85235|histone cluster 1, H2ah##BC148293|HIST1H2AH|85235|histone cluster 1, H2ah##NM_080596|HIST1H2AH|85235|histone cluster 1, H2ah##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83##NM_001076781|ZNF391|346157|zinc finger protein 391##AK092633|ZNF391|346157|zinc finger protein 391##AK294965|ZNF391|346157|zinc finger protein 391##BC132797|ZNF391|346157|zinc finger protein 391##BC022992|ZNF184|7738|zinc finger protein 184##AK123011|ZNF184|7738|zinc finger protein 184##AK312804|ZNF184|7738|zinc finger protein 184##NM_007149|ZNF184|7738|zinc finger protein 184	0.0	
chr6	41755317	41755420	reg1016241.p4	3.756	+	NM_001134493	-188	+	TSC_hg19_v1_chr6_+_41754422 AJ420506	-919	+	AL137721 NM_013397 TSC_hg19_v1_chr6_+_41748522 BC027896 AK057184	-6783	+	TSC_hg19_v1_chr6_+_41755397 BC015975	21	+	BC107435 AF216754 TSC_hg19_v1_chr6_+_41755425 BC018624 BC067252 BC022274 AB435319 L34839	65	+	TSC_hg19_v1_chr6_-_41863114 BC014176 NM_018561	107733	-	NM_001134493|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AJ420506|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##NM_013397|PRICKLE4|29964|prickle homolog 4 (Drosophila)##BC015975|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC107435|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AF216754|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC018624|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC067252|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC022274|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AB435319|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##L34839|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC014176|USP49|25862|ubiquitin specific peptidase 49##NM_018561|USP49|25862|ubiquitin specific peptidase 49	0.0	
chr9	129916790	129916884	reg1032092.p1	3.756	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-31807	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-31875	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-31929	-	NM_032293 AK293732 AK095679	109970	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	242609	+	TSC_hg19_v1_chr9_-_130186602 AK124330	269729	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.0	
chr9	130218146	130218222	reg1020117.p2	3.756	+	BC009239 NM_001005374	-3651	+	NM_001005373 NM_001190723 TSC_hg19_v1_chr9_+_130213788 AK056203 NM_138361 AK226106 AY358830	-4400	+	BC059950 BC094831 BC050644 BC071921 L06505 AF037643 AB209471 AK026526 AK057602 BC105603 D28443 NM_000976	-4504	-	AB210016 BC067366 TSC_hg19_v1_chr9_-_130331266	113021	-	TSC_hg19_v1_chr9_-_130331353 BC110345 NM_022833 AF192911	113211	-	TSC_hg19_v1_chr9_-_130341311 AF151783 NM_001035534	123104	-	BC009239|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001005374|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001005373|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_001190723|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AK056203|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##NM_138361|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AK226106|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##AY358830|LRSAM1|90678|leucine rich repeat and sterile alpha motif containing 1##BC059950|RPL12|6136|ribosomal protein L12##BC094831|RPL12|6136|ribosomal protein L12##BC050644|RPL12|6136|ribosomal protein L12##L06505|RPL12|6136|ribosomal protein L12##AB209471|RPL12|6136|ribosomal protein L12##AK026526|RPL12|6136|ribosomal protein L12##AK057602|RPL12|6136|ribosomal protein L12##BC105603|RPL12|6136|ribosomal protein L12##D28443|RPL12|6136|ribosomal protein L12##NM_000976|RPL12|6136|ribosomal protein L12##AB210016|FAM129B|64855|family with sequence similarity 129, member B##BC067366|FAM129B|64855|family with sequence similarity 129, member B##BC110345|FAM129B|64855|family with sequence similarity 129, member B##NM_022833|FAM129B|64855|family with sequence similarity 129, member B##AF192911|FAM129B|64855|family with sequence similarity 129, member B##AF151783|FAM129B|64855|family with sequence similarity 129, member B##NM_001035534|FAM129B|64855|family with sequence similarity 129, member B	0.0	
chr10	12392671	12392783	reg1034510.p1	3.755	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-950	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-1010	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	-1152	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	650972	-	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	749418	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	810841	+	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10	0.0	
chr11	35034191	35034275	reg1032292.p1	3.755	+	TSC_hg19_v1_chr11_+_34938187 BX648910 U82328 BC010389 AK312463 AK301384 AF001437 CU679691 Y13145	-96076	+	CU678963 AB590513 TSC_hg19_v1_chr11_-_34937923 BC017594 BC009077 AK302225 AK225249 AF132963 BC008440 AK292648 NM_015957	-96344	-	NM_001135024 NM_001166158 NM_003477	-96557	+	TSC_hg19_v1_chr11_+_35160385 AL832642 NM_000610 NM_001001389 NM_001001390 NM_001001391 NM_001001392 NM_001202555 NM_001202556 NM_001202557	126167	+	TSC_hg19_v1_chr11_+_35160717 AK297776 D28447 X66733 X55150 BC004372 BC052287 AY101193 BC067348 AY101192 M24915 X56794 U40373 S66400	126501	+	TSC_hg19_v1_chr11_+_35160821 M59040	126585	+	BX648910|PDHX|8050|pyruvate dehydrogenase complex, component X##U82328|PDHX|8050|pyruvate dehydrogenase complex, component X##BC010389|PDHX|8050|pyruvate dehydrogenase complex, component X##AK312463|PDHX|8050|pyruvate dehydrogenase complex, component X##AK301384|PDHX|8050|pyruvate dehydrogenase complex, component X##AF001437|PDHX|8050|pyruvate dehydrogenase complex, component X##Y13145|PDHX|8050|pyruvate dehydrogenase complex, component X##BC017594|APIP|51074|APAF1 interacting protein##BC009077|APIP|51074|APAF1 interacting protein##AK302225|APIP|51074|APAF1 interacting protein##AK225249|APIP|51074|APAF1 interacting protein##AF132963|APIP|51074|APAF1 interacting protein##BC008440|APIP|51074|APAF1 interacting protein##AK292648|APIP|51074|APAF1 interacting protein##NM_015957|APIP|51074|APAF1 interacting protein##NM_001135024|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_001166158|PDHX|8050|pyruvate dehydrogenase complex, component X##NM_003477|PDHX|8050|pyruvate dehydrogenase complex, component X##AL832642|CD44|960|CD44 molecule (Indian blood group)##NM_000610|CD44|960|CD44 molecule (Indian blood group)##NM_001001389|CD44|960|CD44 molecule (Indian blood group)##NM_001001390|CD44|960|CD44 molecule (Indian blood group)##NM_001001391|CD44|960|CD44 molecule (Indian blood group)##NM_001001392|CD44|960|CD44 molecule (Indian blood group)##NM_001202555|CD44|960|CD44 molecule (Indian blood group)##NM_001202556|CD44|960|CD44 molecule (Indian blood group)##NM_001202557|CD44|960|CD44 molecule (Indian blood group)##AK297776|CD44|960|CD44 molecule (Indian blood group)##D28447|CD44|960|CD44 molecule (Indian blood group)##X66733|CD44|960|CD44 molecule (Indian blood group)##X55150|CD44|960|CD44 molecule (Indian blood group)##BC004372|CD44|960|CD44 molecule (Indian blood group)##BC052287|CD44|960|CD44 molecule (Indian blood group)##AY101193|CD44|960|CD44 molecule (Indian blood group)##BC067348|CD44|960|CD44 molecule (Indian blood group)##AY101192|CD44|960|CD44 molecule (Indian blood group)##M24915|CD44|960|CD44 molecule (Indian blood group)##X56794|CD44|960|CD44 molecule (Indian blood group)##U40373|CD44|960|CD44 molecule (Indian blood group)##S66400|CD44|960|CD44 molecule (Indian blood group)##M59040|CD44|960|CD44 molecule (Indian blood group)	0.0	
chr11	67367883	67368040	reg1028128.p1	3.755	+	TSC_hg19_v1_chr11_+_67351285 AY887902 BC010915 BC044846 X15480 U62589 U30897	-16672	+	NM_000852 TSC_hg19_v1_chr11_+_67351145	-16855	+	AB528802 AF169154 BC018476 NM_016366	-77113	-	NM_001166102 NM_007103 TSC_hg19_v1_chr11_+_67374428 AF092131 AF053070 BC008146 AK310537 AK223061 AK293522 AK300726 BC015645 AB590249 CR456739 CU677379 CU678877 DQ893236 DQ896566 AK316122	6440	+	BC007619 TSC_hg19_v1_chr11_+_67377037	9020	+	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	29442	-	BC010915|GSTP1|2950|glutathione S-transferase pi 1##BC044846|GSTP1|2950|glutathione S-transferase pi 1##X15480|GSTP1|2950|glutathione S-transferase pi 1##U62589|GSTP1|2950|glutathione S-transferase pi 1##U30897|GSTP1|2950|glutathione S-transferase pi 1##NM_000852|GSTP1|2950|glutathione S-transferase pi 1##AF169154|CABP2|51475|calcium binding protein 2##BC018476|CABP2|51475|calcium binding protein 2##NM_016366|CABP2|51475|calcium binding protein 2##NM_001166102|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_007103|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF092131|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF053070|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC008146|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK310537|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK223061|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK293522|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK300726|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC015645|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##CR456739|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ893236|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ896566|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK316122|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC007619|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8	0.010277	
chr1	183089906	183090006	reg1037595.p2	3.755	+	TSC_hg19_v1_chr1_+_182992694 AB385108	-97184	+	TSC_hg19_v1_chr1_+_182992572 BC067813 NM_002293 J03202	-97452	+	BC050305 BC132764 BC144326 AF288398 NM_030933 BC026084	-167375	-	BC035429 TSC_hg19_v1_chr1_+_183114284	24295	+	NM_005562 NM_018891 TSC_hg19_v1_chr1_+_183155211	65236	+	AK307945 Z15008 Z15009 TSC_hg19_v1_chr1_+_183155386	65417	+	BC067813|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##NM_002293|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##J03202|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##BC050305|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC132764|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC144326|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##AF288398|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##NM_030933|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC026084|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC035429|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##NM_005562|LAMC2|3918|laminin, gamma 2##NM_018891|LAMC2|3918|laminin, gamma 2##AK307945|LAMC2|3918|laminin, gamma 2##Z15008|LAMC2|3918|laminin, gamma 2##Z15009|LAMC2|3918|laminin, gamma 2	0.0	
chr13	40250596	40250700	reg1033069.p1	3.755	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-20787	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-73286	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-73321	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	990064	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	1094644	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	1094684	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.980298	CTCF.p2:-5:0.980
chr15	76214207	76214347	reg1034424.p1	3.755	+	TSC_hg19_v1_chr15_+_76196276 BC020204 NM_012170 NM_147188 AK307084 AK024048 BC041691 AK223500 BC039024 AK294311 BC008762 BC032540 CU692024 AY005144	-18028	+	AK296234 NM_001145335 TSC_hg19_v1_chr15_+_76136384	-77889	+	TSC_hg19_v1_chr15_+_76135995 CU676032 AK294199	-78239	+	CR749519 AK311507 BC017568 NM_138573	90496	-	AK311204 TSC_hg19_v1_chr15_-_76352131	137825	-	TSC_hg19_v1_chr15_+_76352281 AK095509 NM_152335	138012	+	BC020204|FBXO22|26263|F-box protein 22##NM_012170|FBXO22|26263|F-box protein 22##NM_147188|FBXO22|26263|F-box protein 22##AK307084|FBXO22|26263|F-box protein 22##AK024048|FBXO22|26263|F-box protein 22##BC041691|FBXO22|26263|F-box protein 22##AK223500|FBXO22|26263|F-box protein 22##BC039024|FBXO22|26263|F-box protein 22##AK294311|FBXO22|26263|F-box protein 22##BC032540|FBXO22|26263|F-box protein 22##AY005144|FBXO22|26263|F-box protein 22##AK296234|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##NM_001145335|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK294199|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##CR749519|NRG4|145957|neuregulin 4##AK311507|NRG4|145957|neuregulin 4##BC017568|NRG4|145957|neuregulin 4##NM_138573|NRG4|145957|neuregulin 4##AK311204|NRG4|145957|neuregulin 4##AK095509|C15orf27|123591|chromosome 15 open reading frame 27##NM_152335|C15orf27|123591|chromosome 15 open reading frame 27	0.543497	CTCF.p2:6:0.543
chr17	65574372	65574552	reg1037447.p2	3.755	+	BC007905 NM_012417 NM_181671	-200539	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-200874	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-201053	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	139588	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	247240	+	AK293224 TSC_hg19_v1_chr17_+_65822221	247755	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.0	
chr20	239739	239836	reg1036629.p2	3.755	+	AY358708 EF426755 NM_207469 BC137292 BC137293 AF525932 AY621329	-1390	+	BC070359 NM_080831 AY122480 AY358186 CU687092 HQ447599 AF525931 AF529413	-31874	+	AF525930 NM_001037732 BC140936	-69495	-	TSC_hg19_v1_chr20_-_271080 AK091924 AX747257 AK304526 BX640715 BC051762	31287	-	AK302223 TSC_hg19_v1_chr20_-_271367 BC134417 BC137450 BC144648 BC144649 AK097394 NM_080571 NM_153269	31577	-	TSC_hg19_v1_chr20_+_278213 BC069238 NM_033089 AK025768 BC107584 BC036469	38422	+	AY358708|DEFB132|400830|defensin, beta 132##EF426755|DEFB132|400830|defensin, beta 132##NM_207469|DEFB132|400830|defensin, beta 132##BC137292|DEFB132|400830|defensin, beta 132##BC137293|DEFB132|400830|defensin, beta 132##AF525932|DEFB132|400830|defensin, beta 132##AY621329|DEFB132|400830|defensin, beta 132##BC070359|DEFB129|140881|defensin, beta 129##NM_080831|DEFB129|140881|defensin, beta 129##AY122480|DEFB129|140881|defensin, beta 129##AY358186|DEFB129|140881|defensin, beta 129##HQ447599|DEFB129|140881|defensin, beta 129##AF525931|DEFB129|140881|defensin, beta 129##AF529413|DEFB129|140881|defensin, beta 129##AF525930|DEFB128|245939|defensin, beta 128##NM_001037732|DEFB128|245939|defensin, beta 128##BC140936|DEFB128|245939|defensin, beta 128##AK091924|C20orf96|140680|chromosome 20 open reading frame 96##AK304526|C20orf96|140680|chromosome 20 open reading frame 96##BX640715|C20orf96|140680|chromosome 20 open reading frame 96##BC051762|C20orf96|140680|chromosome 20 open reading frame 96##AK302223|C20orf96|140680|chromosome 20 open reading frame 96##BC134417|C20orf96|140680|chromosome 20 open reading frame 96##BC137450|C20orf96|140680|chromosome 20 open reading frame 96##BC144648|C20orf96|140680|chromosome 20 open reading frame 96##BC144649|C20orf96|140680|chromosome 20 open reading frame 96##AK097394|C20orf96|140680|chromosome 20 open reading frame 96##NM_080571|C20orf96|140680|chromosome 20 open reading frame 96##NM_153269|C20orf96|140680|chromosome 20 open reading frame 96##BC069238|ZCCHC3|85364|zinc finger, CCHC domain containing 3##NM_033089|ZCCHC3|85364|zinc finger, CCHC domain containing 3##AK025768|ZCCHC3|85364|zinc finger, CCHC domain containing 3##BC107584|ZCCHC3|85364|zinc finger, CCHC domain containing 3##BC036469|ZCCHC3|85364|zinc finger, CCHC domain containing 3	0.569886	CTCF.p2:-5:0.570
chr4	53848867	53848964	reg1035471.p1	3.755	+	TSC_hg19_v1_chr4_+_53728483 AK021492 AK027267 AK314942 AY839725 AY839726 BC001087 BC001846 NM_023940 BC025694	-120427	+	AK095318 NM_001242690 NM_024534	-231122	-	AY189288 TSC_hg19_v1_chr4_-_53617616	-231325	-	BC012458 CU689380 GQ129374 GQ129375 TSC_hg19_v1_chr4_-_54232229 BC021137 AB074276 AK096833 BC032453 AY299407 NM_152540	383220	-	TSC_hg19_v1_chr4_+_54243807 AK295737	394854	+	TSC_hg19_v1_chr4_+_54243821 NM_001134937 NM_001134938 NM_030917	394900	+	AK027267|RASL11B|65997|RAS-like, family 11, member B##AK314942|RASL11B|65997|RAS-like, family 11, member B##AY839725|RASL11B|65997|RAS-like, family 11, member B##AY839726|RASL11B|65997|RAS-like, family 11, member B##BC001087|RASL11B|65997|RAS-like, family 11, member B##BC001846|RASL11B|65997|RAS-like, family 11, member B##NM_023940|RASL11B|65997|RAS-like, family 11, member B##BC025694|RASL11B|65997|RAS-like, family 11, member B##NM_001242690|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##NM_024534|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##AY189288|ERVMER34-1|100288413|endogenous retrovirus group MER34, member 1##BC012458|SCFD2|152579|sec1 family domain containing 2##GQ129374|SCFD2|152579|sec1 family domain containing 2##GQ129375|SCFD2|152579|sec1 family domain containing 2##BC021137|SCFD2|152579|sec1 family domain containing 2##AB074276|SCFD2|152579|sec1 family domain containing 2##AK096833|SCFD2|152579|sec1 family domain containing 2##BC032453|SCFD2|152579|sec1 family domain containing 2##AY299407|SCFD2|152579|sec1 family domain containing 2##NM_152540|SCFD2|152579|sec1 family domain containing 2##AK295737|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_001134937|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_001134938|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)##NM_030917|FIP1L1|81608|FIP1 like 1 (S. cerevisiae)	0.540158	CTCF.p2:20:0.540
chr6	6915500	6915605	reg1033132.p1	3.755	+	BC039678 TSC_hg19_v1_chr6_+_6725205	-190391	+	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	-326602	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-594642	-	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	192274	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	192483	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	192671	+	NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1	0.178547	
chr7	100289176	100289287	reg1008891.p1	3.755	+	NM_022574	-2362	-	TSC_hg19_v1_chr7_+_100273776 M36429 AB528576 CU679597 AF501883 CR541729	-15399	+	M16538 TSC_hg19_v1_chr7_+_100271486 AK291592	-17737	+	TSC_hg19_v1_chr7_+_100303755 NM_005837 BC001430 U94316	14489	+	NM_000799 X02157 BC093628 BC111937 BC143225 AB463610 JN849371	29281	+	AF332975 AF332976 AF332977 AF332978 AF332979 AF332980 NM_003386 NM_173059	42017	+	NM_022574|GIGYF1|64599|GRB10 interacting GYF protein 1##M36429|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##AF501883|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##CR541729|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##M16538|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##AK291592|GNB2|2783|guanine nucleotide binding protein (G protein), beta polypeptide 2##NM_005837|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##BC001430|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##U94316|POP7|10248|processing of precursor 7, ribonuclease P/MRP subunit (S. cerevisiae)##NM_000799|EPO|2056|erythropoietin##X02157|EPO|2056|erythropoietin##BC093628|EPO|2056|erythropoietin##BC111937|EPO|2056|erythropoietin##BC143225|EPO|2056|erythropoietin##JN849371|EPO|2056|erythropoietin##AF332975|ZAN|7455|zonadhesin##AF332976|ZAN|7455|zonadhesin##AF332977|ZAN|7455|zonadhesin##AF332978|ZAN|7455|zonadhesin##AF332979|ZAN|7455|zonadhesin##AF332980|ZAN|7455|zonadhesin##NM_003386|ZAN|7455|zonadhesin##NM_173059|ZAN|7455|zonadhesin	0.1339	
chr8	75878132	75878286	reg1031950.p1	3.755	+	CR749657 NM_015886	-141438	+	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	-615519	+	BX537756 BC139832 BC098299 BC098314 BC099736 BC113856 BC114464 NM_020647 BC140875 BC140876	-644681	-	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	18700	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	441979	+	BX571750 NM_004133 EU832451 HQ692842	574005	+	CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15##AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BX537756|JPH1|56704|junctophilin 1##BC139832|JPH1|56704|junctophilin 1##BC098299|JPH1|56704|junctophilin 1##BC098314|JPH1|56704|junctophilin 1##BC099736|JPH1|56704|junctophilin 1##BC113856|JPH1|56704|junctophilin 1##BC114464|JPH1|56704|junctophilin 1##NM_020647|JPH1|56704|junctophilin 1##BC140875|JPH1|56704|junctophilin 1##BC140876|JPH1|56704|junctophilin 1##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma	0.989004	CTCF.p2:-21:0.989
chr9	134631025	134631123	reg1013218.p1	3.755	+	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	-15784	-	D21239 NM_005312	-18150	-	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	-45872	-	Z36848 AF104252 AF230382 DQ099387 AB527898 EU446747 TSC_hg19_v1_chr9_-_134955238 BC064608 BC070331	324075	-	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	324176	-	TSC_hg19_v1_chr9_+_135037083 AY358165	406017	+	EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##Z36848|MED27|9442|mediator complex subunit 27##AF104252|MED27|9442|mediator complex subunit 27##AF230382|MED27|9442|mediator complex subunit 27##DQ099387|MED27|9442|mediator complex subunit 27##EU446747|MED27|9442|mediator complex subunit 27##BC064608|MED27|9442|mediator complex subunit 27##BC070331|MED27|9442|mediator complex subunit 27##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AY358165|NTNG2|84628|netrin G2	0.354773	
chr1	1235576	1235686	reg1034765.p2	3.754	+	NM_001130413 BC040882 AK127357	-19740	+	TSC_hg19_v1_chr1_+_1209415 DQ898177	-26231	+	TSC_hg19_v1_chr1_-_1209229 BC094777 NM_058167 NM_194315 NM_194457 NM_194458	-26401	-	TSC_hg19_v1_chr1_-_1243285 BC051194 NM_030649	7760	-	TSC_hg19_v1_chr1_+_1243987 AK075292 BC034304 NM_153339 AK298218	8367	+	AB463529 AM393218 CR533557 AK056652 AK022675 TSC_hg19_v1_chr1_-_1260041 BC042444 AK092190 AK297350 BC008041 BC020199 BC007978 AK291387 AK021939 AK058018 AL136813 NM_017871 AK023356 AK027767	24393	-	NM_001130413|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##BC040882|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##AK127357|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##BC094777|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_058167|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194315|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194457|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194458|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##BC051194|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3##NM_030649|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3##AK075292|PUSL1|126789|pseudouridylate synthase-like 1##BC034304|PUSL1|126789|pseudouridylate synthase-like 1##NM_153339|PUSL1|126789|pseudouridylate synthase-like 1##AK298218|PUSL1|126789|pseudouridylate synthase-like 1##AM393218|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##CR533557|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK056652|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK022675|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC042444|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK092190|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK297350|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC008041|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC020199|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC007978|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK291387|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK021939|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK058018|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AL136813|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##NM_017871|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK023356|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK027767|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like	0.0	
chr12	4636075	4636255	reg1020503.p1	3.754	+	BC121097 BC121098 NM_020996 X63454	-81386	-	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	-147365	-	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	-205774	+	TSC_hg19_v1_chr12_-_4647633 AJ272205 BC016908	11454	-	AL834377 NM_020374 TSC_hg19_v1_chr12_-_4647648	11481	-	TSC_hg19_v1_chr12_-_4647672 AK074479 BX641128	11503	-	BC121097|FGF6|2251|fibroblast growth factor 6##BC121098|FGF6|2251|fibroblast growth factor 6##NM_020996|FGF6|2251|fibroblast growth factor 6##X63454|FGF6|2251|fibroblast growth factor 6##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AJ272205|C12orf4|57102|chromosome 12 open reading frame 4##BC016908|C12orf4|57102|chromosome 12 open reading frame 4##AL834377|C12orf4|57102|chromosome 12 open reading frame 4##NM_020374|C12orf4|57102|chromosome 12 open reading frame 4##AK074479|C12orf4|57102|chromosome 12 open reading frame 4##BX641128|C12orf4|57102|chromosome 12 open reading frame 4	0.0	
chr16	70462054	70462197	reg1033000.p1	3.754	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-81297	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-128977	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-129049	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	10856	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	26374	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	40715	+	AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##AK096727|FUK|197258|fucokinase	0.0	
chr18	70197979	70198059	reg1037343.p2	3.754	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-2241758	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-2241852	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-2325081	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	12756	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	13711	-	AF448839 NM_138999	334914	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.191304	
chr5	22971111	22971243	reg1035950.p1	3.754	+	L33477 NM_004061	-117447	-	BC047608 TSC_hg19_v1_chr5_-_22853454	-117731	-	TSC_hg19_v1_chr5_-_22212879 AK314800	-758296	-	DQ388610 NM_020227 AK301776	536566	+	NM_006727	1673907	-	BC107594 BC109384 BC113745 AB035302 AK307779 NM_016279 AK308697	4067494	-	L33477|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##NM_004061|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##BC047608|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)##DQ388610|PRDM9|56979|PR domain containing 9##NM_020227|PRDM9|56979|PR domain containing 9##AK301776|PRDM9|56979|PR domain containing 9##NM_006727|CDH10|1008|cadherin 10, type 2 (T2-cadherin)##BC107594|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC109384|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##BC113745|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AB035302|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK307779|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##NM_016279|CDH9|1007|cadherin 9, type 2 (T1-cadherin)##AK308697|CDH9|1007|cadherin 9, type 2 (T1-cadherin)	0.0	
chr6	107990423	107990580	reg1034395.p1	3.754	+	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	-179073	+	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	-209771	-	BC131628 NM_001080450	-554866	-	AK303562 AK074125 TSC_hg19_v1_chr6_-_108145518 AK093571 AX748208 NM_198081	155015	-	AF100141 CU690382 CU690568 BC001153 TSC_hg19_v1_chr6_-_108279282 AK074835	288756	-	TSC_hg19_v1_chr6_-_108279316 AJ011779	288811	-	NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AK303562|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK074125|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AK093571|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##NM_198081|SCML4|256380|sex comb on midleg-like 4 (Drosophila)##AF100141|SEC63|11231|SEC63 homolog (S. cerevisiae)##BC001153|SEC63|11231|SEC63 homolog (S. cerevisiae)##AK074835|SEC63|11231|SEC63 homolog (S. cerevisiae)##AJ011779|SEC63|11231|SEC63 homolog (S. cerevisiae)	0.0	
chr7	90712334	90712422	reg1033973.p1	3.754	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	-373218	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	-373595	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	-486569	+	BC017719 TSC_hg19_v1_chr7_+_90893724	181323	+	TSC_hg19_v1_chr7_+_90893747 AB017363 NM_003505 AF072872 BC051271 AK314996	181498	+	TSC_hg19_v1_chr7_-_91509979 BC108648 AL832861 AK298469 AK313641 NM_006980 Y09615 AK222730 AK311568	797637	-	AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##BC017719|FZD1|8321|frizzled family receptor 1##AB017363|FZD1|8321|frizzled family receptor 1##NM_003505|FZD1|8321|frizzled family receptor 1##AF072872|FZD1|8321|frizzled family receptor 1##BC051271|FZD1|8321|frizzled family receptor 1##AK314996|FZD1|8321|frizzled family receptor 1##BC108648|MTERF|7978|mitochondrial transcription termination factor##AL832861|MTERF|7978|mitochondrial transcription termination factor##AK298469|MTERF|7978|mitochondrial transcription termination factor##AK313641|MTERF|7978|mitochondrial transcription termination factor##NM_006980|MTERF|7978|mitochondrial transcription termination factor##Y09615|MTERF|7978|mitochondrial transcription termination factor##AK222730|MTERF|7978|mitochondrial transcription termination factor	0.0	
chr11	111285205	111285336	reg1033092.p2	3.753	+	NM_006235	-35114	-	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	-35318	-	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	-115237	+	BC031045 NM_017589	97800	-	AK128145 NM_001100388 NM_207430 BC039505	100252	+	AK055539 NM_178834	125962	+	NM_006235|POU2AF1|5450|POU class 2 associating factor 1##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##BC031045|BTG4|54766|B-cell translocation gene 4##NM_017589|BTG4|54766|B-cell translocation gene 4##AK128145|C11orf88|399949|chromosome 11 open reading frame 88##NM_001100388|C11orf88|399949|chromosome 11 open reading frame 88##NM_207430|C11orf88|399949|chromosome 11 open reading frame 88##BC039505|C11orf88|399949|chromosome 11 open reading frame 88##AK055539|LAYN|143903|layilin##NM_178834|LAYN|143903|layilin	0.05165	
chr11	63302682	63302849	reg1031535.p1	3.753	+	AF244975 AF244977 NM_001142537 NM_001142538	-27307	+	AF244974 AF244976 TSC_hg19_v1_chr11_+_63273565 BC028222	-29185	+	AK313851 NM_001142535 NM_001142536 NM_033101 TSC_hg19_v1_chr11_+_63273527	-29240	+	NM_004585 AF092922 AK293357 AK312110 BC009678 AF060228 AB030815 AK123723	1529	+	AK000563 NM_017878	28089	-	AB439591 AB528317 DQ892568 DQ895783 AB030814 AF317086 AX775893 BC103807 BC103808 TSC_hg19_v1_chr11_-_63381778	78866	-	AF244975|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AF244977|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142537|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142538|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AF244974|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AF244976|LGALS12|85329|lectin, galactoside-binding, soluble, 12##BC028222|LGALS12|85329|lectin, galactoside-binding, soluble, 12##AK313851|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142535|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_001142536|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_033101|LGALS12|85329|lectin, galactoside-binding, soluble, 12##NM_004585|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF092922|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AK293357|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AK312110|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##BC009678|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AF060228|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AB030815|RARRES3|5920|retinoic acid receptor responder (tazarotene induced) 3##AK000563|HRASLS2|54979|HRAS-like suppressor 2##NM_017878|HRASLS2|54979|HRAS-like suppressor 2##AB439591|PLA2G16|11145|phospholipase A2, group XVI##DQ892568|PLA2G16|11145|phospholipase A2, group XVI##DQ895783|PLA2G16|11145|phospholipase A2, group XVI##AB030814|PLA2G16|11145|phospholipase A2, group XVI##AF317086|PLA2G16|11145|phospholipase A2, group XVI##BC103807|PLA2G16|11145|phospholipase A2, group XVI##BC103808|PLA2G16|11145|phospholipase A2, group XVI	0.0	
chr1	20414292	20414431	reg1040107.p1	3.753	+	TSC_hg19_v1_chr1_+_20396654 NM_000929 BC036792 U03090	-17617	+	BC005919 NM_000300 NM_001161727 NM_001161728	-107442	-	M22430 AK291302 NM_001161729	-108239	-	AB590095 AM392918 AM392954 AM392977 AM393597 AM393824 BC025706 NM_012400 AF112982 AY358606 AK290406 AF188625 AK310156 AK311903 AK301396	31663	-	AK093645 AX748240 BX647458 NM_022819 AB528809	51507	+	TSC_hg19_v1_chr1_+_20480706 BC041651	66402	+	NM_000929|PLA2G5|5322|phospholipase A2, group V##BC036792|PLA2G5|5322|phospholipase A2, group V##U03090|PLA2G5|5322|phospholipase A2, group V##BC005919|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_000300|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161727|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161728|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##M22430|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##AK291302|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##NM_001161729|PLA2G2A|5320|phospholipase A2, group IIA (platelets, synovial fluid)##AM392918|PLA2G2D|26279|phospholipase A2, group IID##AM392954|PLA2G2D|26279|phospholipase A2, group IID##AM392977|PLA2G2D|26279|phospholipase A2, group IID##AM393597|PLA2G2D|26279|phospholipase A2, group IID##AM393824|PLA2G2D|26279|phospholipase A2, group IID##BC025706|PLA2G2D|26279|phospholipase A2, group IID##NM_012400|PLA2G2D|26279|phospholipase A2, group IID##AF112982|PLA2G2D|26279|phospholipase A2, group IID##AY358606|PLA2G2D|26279|phospholipase A2, group IID##AK290406|PLA2G2D|26279|phospholipase A2, group IID##AF188625|PLA2G2D|26279|phospholipase A2, group IID##AK310156|PLA2G2D|26279|phospholipase A2, group IID##AK311903|PLA2G2D|26279|phospholipase A2, group IID##AK301396|PLA2G2D|26279|phospholipase A2, group IID##AK093645|PLA2G2F|64600|phospholipase A2, group IIF##BX647458|PLA2G2F|64600|phospholipase A2, group IIF##NM_022819|PLA2G2F|64600|phospholipase A2, group IIF	0.0	
chr14	64405355	64405536	reg1039420.p2	3.753	+	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	-85750	+	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	-210696	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	-296883	-	NM_182913 AY061758 AK297874	275432	+	NM_182910	277226	+	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	344218	-	NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)	0.0	
chr15	52892765	52892870	reg1039059.p1	3.753	+	TSC_hg19_v1_chr15_-_52861344 BC100015 AL833077	-31440	-	TSC_hg19_v1_chr15_-_52861228 AF084555 BC003418 NM_006628	-31585	-	AK123616 TSC_hg19_v1_chr15_-_52861045 AJ223091 CR457132 AK311751	-31758	-	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	78064	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	189377	-	AK096055 BX537884 NM_182758	1159030	-	BC100015|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AL833077|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AF084555|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC003418|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##NM_006628|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK123616|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AJ223091|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##CR457132|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK311751|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72	0.89573	CTCF.p2:34:0.896
chr20	46130582	46130763	reg1034002.p2	3.753	+	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	-50	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-145184	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-154025	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	12	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	284080	-	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	284646	-	NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2	0.0	
chr5	18113967	18114066	reg1038598.p1	3.753	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-896176	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-896404	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-1177631	-	AK295087 BC031051 NM_001167667 NM_004934	1874306	-	TSC_hg19_v1_chr5_+_21459621 AK290693	3345593	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	3345632	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.404088	CTCF.p2:15:0.404
chr6	139696576	139696707	reg1033755.p1	3.753	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-857	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-880	-	NM_001168389 NM_001168388	-1218	-	BC095542 GU727635 M73482 NM_002511	2713223	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	2771749	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	2771765	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.0	
chr9	139839058	139839238	reg1022885.p1	3.753	+	BC014130 TSC_hg19_v1_chr9_-_139839140 BC035355 BC031100 NM_018998	-12	-	BC014297 TSC_hg19_v1_chr9_-_139839082 AK315738	-64	-	TSC_hg19_v1_chr9_-_139839068 AK026081	-80	-	NM_000606 M17999 X06465 BC113624 BC113626 M17263 HQ258743 AB590759	585	+	BC041168 NM_178536 AY301272	7625	+	TSC_hg19_v1_chr9_+_139871955 NM_000954 AK075333 M61900 AK312817	32813	+	BC014130|FBXW5|54461|F-box and WD repeat domain containing 5##BC035355|FBXW5|54461|F-box and WD repeat domain containing 5##BC031100|FBXW5|54461|F-box and WD repeat domain containing 5##NM_018998|FBXW5|54461|F-box and WD repeat domain containing 5##BC014297|FBXW5|54461|F-box and WD repeat domain containing 5##AK315738|FBXW5|54461|F-box and WD repeat domain containing 5##AK026081|FBXW5|54461|F-box and WD repeat domain containing 5##NM_000606|C8G|733|complement component 8, gamma polypeptide##M17999|C8G|733|complement component 8, gamma polypeptide##X06465|C8G|733|complement component 8, gamma polypeptide##BC113624|C8G|733|complement component 8, gamma polypeptide##BC113626|C8G|733|complement component 8, gamma polypeptide##M17263|C8G|733|complement component 8, gamma polypeptide##HQ258743|C8G|733|complement component 8, gamma polypeptide##BC041168|LCN12|286256|lipocalin 12##NM_178536|LCN12|286256|lipocalin 12##AY301272|LCN12|286256|lipocalin 12##NM_000954|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##AK075333|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##M61900|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)##AK312817|PTGDS|5730|prostaglandin D2 synthase 21kDa (brain)	0.0	
chr9	297554	297620	reg1042221.p1	3.753	+	TSC_hg19_v1_chr9_+_273045 HM991479 NM_001190458 NM_001193536 AK093572 AX748209 HM991480 BC045629 AK310555 BC130518 BC143929	-24534	+	NM_152569	-81695	-	AK293353 TSC_hg19_v1_chr9_+_214867	-82708	+	TSC_hg19_v1_chr9_+_504732 BX648931 AL832454 NM_015158 AK292989 AL833161 AK290028 AB205106	207161	+	AK311119 AB205111 TSC_hg19_v1_chr9_+_684289	386657	+	AB205112 TSC_hg19_v1_chr9_+_686677	389079	+	HM991479|DOCK8|81704|dedicator of cytokinesis 8##NM_001190458|DOCK8|81704|dedicator of cytokinesis 8##NM_001193536|DOCK8|81704|dedicator of cytokinesis 8##AK093572|DOCK8|81704|dedicator of cytokinesis 8##HM991480|DOCK8|81704|dedicator of cytokinesis 8##BC045629|DOCK8|81704|dedicator of cytokinesis 8##AK310555|DOCK8|81704|dedicator of cytokinesis 8##BC130518|DOCK8|81704|dedicator of cytokinesis 8##BC143929|DOCK8|81704|dedicator of cytokinesis 8##NM_152569|C9orf66|157983|chromosome 9 open reading frame 66##AK293353|DOCK8|81704|dedicator of cytokinesis 8##BX648931|KANK1|23189|KN motif and ankyrin repeat domains 1##AL832454|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_015158|KANK1|23189|KN motif and ankyrin repeat domains 1##AK292989|KANK1|23189|KN motif and ankyrin repeat domains 1##AL833161|KANK1|23189|KN motif and ankyrin repeat domains 1##AK290028|KANK1|23189|KN motif and ankyrin repeat domains 1##AB205106|KANK1|23189|KN motif and ankyrin repeat domains 1	0.0	
chr10	50010767	50010940	reg1040224.p1	3.752	+	AK127650 NM_020945	-117338	+	TSC_hg19_v1_chr10_+_49892917 BC034937	-117963	+	TSC_hg19_v1_chr10_-_49864302 AK055937	-146548	-	NM_001006939 BC036722	111427	-	TSC_hg19_v1_chr10_-_50323537 BC041414 AK297931 AK056299 NM_001031746 NM_144984	312670	-	BC029839 BC047597 NM_001164484	331205	-	AK127650|WDFY4|57705|WDFY family member 4##NM_020945|WDFY4|57705|WDFY family member 4##BC034937|WDFY4|57705|WDFY family member 4##AK055937|ARHGAP22|58504|Rho GTPase activating protein 22##NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18##BC041414|VSTM4|196740|V-set and transmembrane domain containing 4##AK297931|VSTM4|196740|V-set and transmembrane domain containing 4##AK056299|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001031746|VSTM4|196740|V-set and transmembrane domain containing 4##NM_144984|VSTM4|196740|V-set and transmembrane domain containing 4##BC029839|FAM170B|170370|family with sequence similarity 170, member B##BC047597|FAM170B|170370|family with sequence similarity 170, member B##NM_001164484|FAM170B|170370|family with sequence similarity 170, member B	0.296919	CTCF.p2:44:0.297
chr11	117064156	117064222	reg1042903.p2	3.752	+	TSC_hg19_v1_chr11_+_117049977 AK303023	-14210	+	TSC_hg19_v1_chr11_+_117049872 AF151799 BC114522 BC114959 AY358442 NM_001040455 AK292974	-14297	+	TSC_hg19_v1_chr11_+_117049458 AK292501	-14632	+	NM_001001522 NM_003186 AK223002 M95787 TSC_hg19_v1_chr11_+_117070088 AK314043 BC010946 BC093050 BC004927 D17409	5890	+	BX640723 TSC_hg19_v1_chr11_+_117075706	11505	+	TSC_hg19_v1_chr11_-_117100552 BT006870 DQ890632 DQ893803	36366	-	AK303023|SIDT2|51092|SID1 transmembrane family, member 2##AF151799|SIDT2|51092|SID1 transmembrane family, member 2##BC114522|SIDT2|51092|SID1 transmembrane family, member 2##BC114959|SIDT2|51092|SID1 transmembrane family, member 2##AY358442|SIDT2|51092|SID1 transmembrane family, member 2##NM_001040455|SIDT2|51092|SID1 transmembrane family, member 2##AK292974|SIDT2|51092|SID1 transmembrane family, member 2##AK292501|SIDT2|51092|SID1 transmembrane family, member 2##NM_001001522|TAGLN|6876|transgelin##NM_003186|TAGLN|6876|transgelin##AK223002|TAGLN|6876|transgelin##M95787|TAGLN|6876|transgelin##AK314043|TAGLN|6876|transgelin##BC010946|TAGLN|6876|transgelin##BC093050|TAGLN|6876|transgelin##BC004927|TAGLN|6876|transgelin##D17409|TAGLN|6876|transgelin##BX640723|TAGLN|6876|transgelin##BT006870|PCSK7|9159|proprotein convertase subtilisin/kexin type 7##DQ890632|PCSK7|9159|proprotein convertase subtilisin/kexin type 7##DQ893803|PCSK7|9159|proprotein convertase subtilisin/kexin type 7	0.0	
chr1	51808038	51808141	reg1027376.p2	3.752	+	TSC_hg19_v1_chr1_-_51796233 AK301587 AK000220	-11857	-	BC028374 NM_001080494	-20180	-	TSC_hg19_v1_chr1_+_51702013 AK313140 AB024703 AF151881 BC020964 AB385089	-105875	+	AF007170 NM_001144832	2649	-	AK090936 AX746691 AK308128 BX647676 NM_001159969	79677	-	DQ367924 AB384758 BC054006 TSC_hg19_v1_chr1_-_51984939 AK129853 U07707 AK313396	176834	-	AK301587|TTC39A|22996|tetratricopeptide repeat domain 39A##AK000220|TTC39A|22996|tetratricopeptide repeat domain 39A##BC028374|TTC39A|22996|tetratricopeptide repeat domain 39A##NM_001080494|TTC39A|22996|tetratricopeptide repeat domain 39A##AK313140|RNF11|26994|ring finger protein 11##AB024703|RNF11|26994|ring finger protein 11##AF151881|RNF11|26994|ring finger protein 11##BC020964|RNF11|26994|ring finger protein 11##AF007170|TTC39A|22996|tetratricopeptide repeat domain 39A##NM_001144832|TTC39A|22996|tetratricopeptide repeat domain 39A##AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15##BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15##NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15##DQ367924|EPS15|2060|epidermal growth factor receptor pathway substrate 15##BC054006|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK129853|EPS15|2060|epidermal growth factor receptor pathway substrate 15##U07707|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK313396|EPS15|2060|epidermal growth factor receptor pathway substrate 15	0.0	
chr15	58624384	58624537	reg1032960.p1	3.752	+	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	-193974	+	NM_001206897 NM_003888 NM_170696	-266340	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	-266582	-	NM_000236 X07228 AK293324 AK309448 TSC_hg19_v1_chr15_+_58724189 D83548 BC132825 BC136495 J03895 J03540 AB528021 HQ258274	99742	+	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	417329	-	TSC_hg19_v1_chr15_-_59041833 AK300472	417362	-	AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_000236|LIPC|3990|lipase, hepatic##X07228|LIPC|3990|lipase, hepatic##AK293324|LIPC|3990|lipase, hepatic##AK309448|LIPC|3990|lipase, hepatic##D83548|LIPC|3990|lipase, hepatic##BC132825|LIPC|3990|lipase, hepatic##BC136495|LIPC|3990|lipase, hepatic##J03895|LIPC|3990|lipase, hepatic##J03540|LIPC|3990|lipase, hepatic##HQ258274|LIPC|3990|lipase, hepatic##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10##AK300472|ADAM10|102|ADAM metallopeptidase domain 10	0.0	
chr18	7221367	7221547	reg1008550.p1	3.752	+	BC144590 NM_005559 X58531	-103673	-	NM_001010000 BX648684 AK308259 AK302026	-386992	+	NM_001243517	-710043	+	NM_001105581	9679	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	345860	+	TSC_hg19_v1_chr18_+_7946885 AK294492	725449	+	BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M	0.0	
chr20	307843	307985	reg1032015.p1	3.752	+	TSC_hg19_v1_chr20_+_306226 BC067361 NM_006943 U35612 BC028103	-1678	+	TSC_hg19_v1_chr20_+_278213 BC069238 NM_033089 AK025768 BC107584 BC036469	-29705	+	AK302223 TSC_hg19_v1_chr20_-_271367 BC134417 BC137450 BC144648 BC144649 AK097394 NM_080571 NM_153269	-36550	-	TSC_hg19_v1_chr20_+_327371 NM_024958 AK290527	19491	+	TSC_hg19_v1_chr20_+_327754 AK026982	19835	+	AY247738 NM_021158 TSC_hg19_v1_chr20_+_361483 AJ697936 AK026945 AK222837 BC027484	53499	+	BC067361|SOX12|6666|SRY (sex determining region Y)-box 12##NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12##U35612|SOX12|6666|SRY (sex determining region Y)-box 12##BC028103|SOX12|6666|SRY (sex determining region Y)-box 12##BC069238|ZCCHC3|85364|zinc finger, CCHC domain containing 3##NM_033089|ZCCHC3|85364|zinc finger, CCHC domain containing 3##AK025768|ZCCHC3|85364|zinc finger, CCHC domain containing 3##BC107584|ZCCHC3|85364|zinc finger, CCHC domain containing 3##BC036469|ZCCHC3|85364|zinc finger, CCHC domain containing 3##AK302223|C20orf96|140680|chromosome 20 open reading frame 96##BC134417|C20orf96|140680|chromosome 20 open reading frame 96##BC137450|C20orf96|140680|chromosome 20 open reading frame 96##BC144648|C20orf96|140680|chromosome 20 open reading frame 96##BC144649|C20orf96|140680|chromosome 20 open reading frame 96##AK097394|C20orf96|140680|chromosome 20 open reading frame 96##NM_080571|C20orf96|140680|chromosome 20 open reading frame 96##NM_153269|C20orf96|140680|chromosome 20 open reading frame 96##NM_024958|NRSN2|80023|neurensin 2##AK290527|NRSN2|80023|neurensin 2##AK026982|NRSN2|80023|neurensin 2##AY247738|TRIB3|57761|tribbles homolog 3 (Drosophila)##NM_021158|TRIB3|57761|tribbles homolog 3 (Drosophila)##AJ697936|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK026945|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK222837|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC027484|TRIB3|57761|tribbles homolog 3 (Drosophila)	0.0	
chr21	36988605	36988692	reg1039776.p2	3.752	+	AK310646 TSC_hg19_v1_chr21_-_36421641 D43969	-567013	-	TSC_hg19_v1_chr21_-_36421598 NM_001754	-567045	-	TSC_hg19_v1_chr21_-_36421585 AK310587 D89788 D89789 D89790	-567067	-	AK095215 BC002898 TSC_hg19_v1_chr21_-_37432613 AB004853 NM_001007259 AF391112 AK001660	443972	-	BC036556 TSC_hg19_v1_chr21_-_37432809 AK300009 NM_017438	444168	-	AB124848 TSC_hg19_v1_chr21_+_37442272 NM_001757	453605	+	D43969|RUNX1|861|runt-related transcription factor 1##NM_001754|RUNX1|861|runt-related transcription factor 1##AK310587|RUNX1|861|runt-related transcription factor 1##D89788|RUNX1|861|runt-related transcription factor 1##D89789|RUNX1|861|runt-related transcription factor 1##D89790|RUNX1|861|runt-related transcription factor 1##AK095215|SETD4|54093|SET domain containing 4##BC002898|SETD4|54093|SET domain containing 4##AB004853|SETD4|54093|SET domain containing 4##NM_001007259|SETD4|54093|SET domain containing 4##AF391112|SETD4|54093|SET domain containing 4##AK001660|SETD4|54093|SET domain containing 4##BC036556|SETD4|54093|SET domain containing 4##AK300009|SETD4|54093|SET domain containing 4##NM_017438|SETD4|54093|SET domain containing 4##AB124848|CBR1|873|carbonyl reductase 1##NM_001757|CBR1|873|carbonyl reductase 1	0.0	
chr2	192542212	192542392	reg1028154.p1	3.752	+	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	-432204	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-525995	-	TSC_hg19_v1_chr2_-_192015965 NM_003151	-526343	-	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	560	+	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	169436	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	169669	-	NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##NM_003151|STAT4|6775|signal transducer and activator of transcription 4##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response	0.0	
chr22	20163080	20163260	reg1027389.p2	3.752	+	NM_001243537	-25740	-	TSC_hg19_v1_chr22_+_20119357 AY894890 BC053544 NM_001185024 NM_013373 AK131238	-43737	+	TSC_hg19_v1_chr22_+_20105145 AB587487 CU013156 CU013444	-58013	+	AB463218 AM393268 CU013070 CU013358 CU680052 DQ892891 DQ896138 AF283463 CR456360 BC011787 AL834449 NM_023004 AY358297	92597	-	CU674332 CU013071 CU013359 TSC_hg19_v1_chr22_-_20307568 CR456361 AK289952 AK307210 BC000682 AK001528 AK310899 AF228708 NM_033257	144399	-	NM_001242313	214498	+	NM_001243537|LOC388849|388849|uncharacterized LOC388849##AY894890|ZDHHC8|29801|zinc finger, DHHC-type containing 8##BC053544|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_001185024|ZDHHC8|29801|zinc finger, DHHC-type containing 8##NM_013373|ZDHHC8|29801|zinc finger, DHHC-type containing 8##AK131238|ZDHHC8|29801|zinc finger, DHHC-type containing 8##CU013156|RANBP1|5902|RAN binding protein 1##CU013444|RANBP1|5902|RAN binding protein 1##AM393268|RTN4R|65078|reticulon 4 receptor##CU013070|RTN4R|65078|reticulon 4 receptor##CU013358|RTN4R|65078|reticulon 4 receptor##DQ892891|RTN4R|65078|reticulon 4 receptor##DQ896138|RTN4R|65078|reticulon 4 receptor##AF283463|RTN4R|65078|reticulon 4 receptor##CR456360|RTN4R|65078|reticulon 4 receptor##BC011787|RTN4R|65078|reticulon 4 receptor##AL834449|RTN4R|65078|reticulon 4 receptor##NM_023004|RTN4R|65078|reticulon 4 receptor##CU013071|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CU013359|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##CR456361|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK289952|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK307210|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##BC000682|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK001528|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AK310899|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##AF228708|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_033257|DGCR6L|85359|DiGeorge syndrome critical region gene 6-like##NM_001242313|TMEM191B|728229|transmembrane protein 191B	0.027753	
chr4	35465341	35465438	reg1036282.p2	3.752	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-4742930	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-4743195	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-4743390	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	780648	-	AK131492 NM_001136536 AK304357 AK316523	817857	+	BC157885 NM_001170700	820254	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.986367	CTCF.p2:-42:0.986
chr6	99217553	99217676	reg1034400.p1	3.752	+	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	-1486524	-	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	-1844991	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-1871850	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	64966	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	65058	+	TSC_hg19_v1_chr6_-_99395800 BC091484 BC032641	178175	-	AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2##BC091484|FBXL4|26235|F-box and leucine-rich repeat protein 4##BC032641|FBXL4|26235|F-box and leucine-rich repeat protein 4	0.333039	CTCF.p2:0:0.333
chr8	103548558	103548668	reg1026366.p2	3.752	+	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	-123702	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-297440	-	NM_001040630	-411479	-	NM_024410 AK315276 BC104456 BC104457	15248	+	BC011538 NM_001032282 S81439	117479	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	119319	-	AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001040630|NCALD|83988|neurocalcin delta##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10	0.0	
chr8	11395452	11395552	reg1025666.p2	3.752	+	S76617 NM_001715 BC018703 BC004473 BC038555	-43909	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-71273	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-190498	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	166218	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	231766	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	264682	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.0	
chr9	95882421	95882602	reg1023209.p2	3.752	+	BC091476 TSC_hg19_v1_chr9_+_95858566	-23932	+	NM_032310 TSC_hg19_v1_chr9_+_95858498 AK057716 AK091611 AX747094 BC042201 BC038856 BC004500	-24031	+	TSC_hg19_v1_chr9_+_95821007 CU677063 DQ894024 EU176188 AY358190	-61487	+	BT007164 CU690562 U72661 U91512 BC019336 BC004440 BC000298 TSC_hg19_v1_chr9_-_95896534 BC048212 NM_004148	14031	-	AJ242724 NM_006648 AB051547 AB463351	64721	+	NM_001098808 TSC_hg19_v1_chr9_-_96108726	226199	-	BC091476|C9orf89|84270|chromosome 9 open reading frame 89##NM_032310|C9orf89|84270|chromosome 9 open reading frame 89##AK057716|C9orf89|84270|chromosome 9 open reading frame 89##AK091611|C9orf89|84270|chromosome 9 open reading frame 89##BC042201|C9orf89|84270|chromosome 9 open reading frame 89##BC038856|C9orf89|84270|chromosome 9 open reading frame 89##BC004500|C9orf89|84270|chromosome 9 open reading frame 89##DQ894024|SUSD3|203328|sushi domain containing 3##EU176188|SUSD3|203328|sushi domain containing 3##AY358190|SUSD3|203328|sushi domain containing 3##BT007164|NINJ1|4814|ninjurin 1##U72661|NINJ1|4814|ninjurin 1##U91512|NINJ1|4814|ninjurin 1##BC019336|NINJ1|4814|ninjurin 1##BC004440|NINJ1|4814|ninjurin 1##BC000298|NINJ1|4814|ninjurin 1##BC048212|NINJ1|4814|ninjurin 1##NM_004148|NINJ1|4814|ninjurin 1##AJ242724|WNK2|65268|WNK lysine deficient protein kinase 2##NM_006648|WNK2|65268|WNK lysine deficient protein kinase 2##AB051547|WNK2|65268|WNK lysine deficient protein kinase 2##NM_001098808|C9orf129|445577|chromosome 9 open reading frame 129	0.0	
chr10	44459566	44459685	reg1033695.p1	3.751	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-315319	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-315420	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-357728	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	420874	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	947093	+	AK056518 TSC_hg19_v1_chr10_-_45455156	995522	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.0	
chr11	1093296	1093404	reg1038556.p2	3.751	+	TSC_hg19_v1_chr11_+_1074873 L21998 NM_002457	-18478	+	AY458429 AY312160 NM_005961 TSC_hg19_v1_chr11_-_1036715	-56664	-	TSC_hg19_v1_chr11_-_1017140 AK096772	-76143	-	TSC_hg19_v1_chr11_+_1151579 AF015521 AJ298317 AF043909	58236	+	TSC_hg19_v1_chr11_+_1213469 Z48314	120124	+	TSC_hg19_v1_chr11_+_1244295 NM_002458 AK310939	150946	+	L21998|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##NM_002457|MUC2|4583|mucin 2, oligomeric mucus/gel-forming##AY458429|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AY312160|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##NM_005961|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AK096772|MUC6|4588|mucin 6, oligomeric mucus/gel-forming##AF015521|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AJ298317|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AF043909|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##Z48314|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##NM_002458|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##AK310939|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming	0.0	
chr11	2587767	2587865	reg1034591.p2	3.751	+	BC007733 TSC_hg19_v1_chr11_-_2560881	-26969	-	TSC_hg19_v1_chr11_+_2466237 AF000571 NM_000218 EF010934 AB464057 AY114213 U86146	-121567	+	AJ270996 BC093787 BC093789 BC143351 BC143353 AF177473 NM_014555	-143559	-	AK123073 TSC_hg19_v1_chr11_-_2721223	133409	-	U22398 BC039188 NM_000076 NM_001122630 NM_001122631 TSC_hg19_v1_chr11_-_2907004 BC067842	319178	-	TSC_hg19_v1_chr11_+_2920918 BC015571 NM_183233	333129	+	AF000571|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##NM_000218|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##EF010934|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AY114213|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##U86146|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AJ270996|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093787|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093789|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143351|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143353|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF177473|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##NM_014555|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AK123073|KCNQ1OT1|10984|KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)##U22398|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC039188|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_000076|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122630|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122631|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC067842|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC015571|SLC22A18|5002|solute carrier family 22, member 18##NM_183233|SLC22A18|5002|solute carrier family 22, member 18	0.0	
chr11	268868	268955	reg1027546.p1	3.751	+	TSC_hg19_v1_chr11_+_236975 AK295944 AK094775 AK222895 AB009398 BC001100 AF083245 AK307447 AF107837 BC001747 BX647314 AB528493 DQ892171 DQ895365 AF086708 BT007307	-31904	+	AK316175 TSC_hg19_v1_chr11_-_236906 AK308681	-32022	-	NM_002817 NM_175932	-32104	+	AF479748 AY154461 NM_138329	9658	+	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	20231	+	BC150562 BC150563 NM_001025295	30610	-	AK295944|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK094775|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK222895|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AB009398|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001100|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF083245|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK307447|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF107837|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BC001747|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BX647314|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ892171|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##DQ895365|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF086708|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##BT007307|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AK316175|SIRT3|23410|sirtuin 3##AK308681|SIRT3|23410|sirtuin 3##NM_002817|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##NM_175932|PSMD13|5719|proteasome (prosome, macropain) 26S subunit, non-ATPase, 13##AF479748|NLRP6|171389|NLR family, pyrin domain containing 6##AY154461|NLRP6|171389|NLR family, pyrin domain containing 6##NM_138329|NLRP6|171389|NLR family, pyrin domain containing 6##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5	0.0	
chr11	46544074	46544182	reg1033203.p1	3.751	+	BC119775 BC119817 AF385590 AF498918 NM_000741 BC095546 BC137535	-135997	-	NM_001012333 TSC_hg19_v1_chr11_+_46403310	-140822	+	TSC_hg19_v1_chr11_+_46403285 X55110	-140841	+	BC045609 NM_017749 AK302808	68814	-	AL834190 TSC_hg19_v1_chr11_-_46615568 AK057896 AK000301 AB051523	71407	-	AK304530 TSC_hg19_v1_chr11_-_46615589	71475	-	BC119775|CHRM4|1132|cholinergic receptor, muscarinic 4##BC119817|CHRM4|1132|cholinergic receptor, muscarinic 4##AF385590|CHRM4|1132|cholinergic receptor, muscarinic 4##AF498918|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_000741|CHRM4|1132|cholinergic receptor, muscarinic 4##BC095546|CHRM4|1132|cholinergic receptor, muscarinic 4##BC137535|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_001012333|MDK|4192|midkine (neurite growth-promoting factor 2)##X55110|MDK|4192|midkine (neurite growth-promoting factor 2)##BC045609|AMBRA1|55626|autophagy/beclin-1 regulator 1##NM_017749|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK302808|AMBRA1|55626|autophagy/beclin-1 regulator 1##AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1##AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1	0.0	
chr22	34292981	34293054	reg1033790.p1	3.751	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-838662	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-890291	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-1095265	+	AJ007583 AB011181 NM_004737 NM_133642	23353	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1169132	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1360459	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr22	34317765	34317934	reg1037080.p2	3.751	+	AJ007583 AB011181 NM_004737 NM_133642	-1479	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-863494	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-915123	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1144300	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1335627	+	AK293694 NM_001135729	1377418	+	AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)	0.0	
chr2	25457874	25457959	reg1035536.p2	3.751	+	NM_000939 NM_001035256	-66358	-	TSC_hg19_v1_chr2_+_25264954 NM_014971 AB023170	-192939	+	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	-263049	-	TSC_hg19_v1_chr2_-_25466801 BC018214	8892	-	TSC_hg19_v1_chr2_-_25467080 BC023612	9219	-	TSC_hg19_v1_chr2_-_25468920 AK025230	11062	-	NM_000939|POMC|5443|proopiomelanocortin##NM_001035256|POMC|5443|proopiomelanocortin##NM_014971|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AB023170|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC018214|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.0	
chr2	61863039	61863174	reg1040103.p1	3.751	+	TSC_hg19_v1_chr2_-_61765394 BX647758 NM_003400	-97701	-	TSC_hg19_v1_chr2_-_61765383 BC032847 CR749840	-97727	-	TSC_hg19_v1_chr2_-_61765358 AL833550	-97751	-	BC107162 BC107163 AK310908 AB527366 AM392542 AM392832 AM393518 TSC_hg19_v1_chr2_-_62081180 BX648834 BX649029 AK023367 BC036448 NM_001201543 NM_032180	218057	-	U38846 EU446763 AB385091 TSC_hg19_v1_chr2_-_62115685 AK294665	252558	-	AK129860 TSC_hg19_v1_chr2_-_62115719 AK295330	252612	-	BX647758|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##NM_003400|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC032847|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##CR749840|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##AL833550|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC107162|FAM161A|84140|family with sequence similarity 161, member A##BC107163|FAM161A|84140|family with sequence similarity 161, member A##AK310908|FAM161A|84140|family with sequence similarity 161, member A##AM392542|FAM161A|84140|family with sequence similarity 161, member A##AM392832|FAM161A|84140|family with sequence similarity 161, member A##AM393518|FAM161A|84140|family with sequence similarity 161, member A##BX648834|FAM161A|84140|family with sequence similarity 161, member A##BX649029|FAM161A|84140|family with sequence similarity 161, member A##AK023367|FAM161A|84140|family with sequence similarity 161, member A##BC036448|FAM161A|84140|family with sequence similarity 161, member A##NM_001201543|FAM161A|84140|family with sequence similarity 161, member A##NM_032180|FAM161A|84140|family with sequence similarity 161, member A##U38846|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##EU446763|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK294665|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK129860|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK295330|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)	0.058412	
chr3	157605984	157606156	reg1033721.p2	3.751	+	NM_001099777 NM_001130001 NM_001130002 NM_001243729 BC126187 BC126189 BC144066 BC029129 BC010062	-344888	+	BC078142 BC057999 NM_001167915 NM_001167916	-384682	-	BC111017 AB051479 NM_001167911 NM_001167912	-384939	-	TSC_hg19_v1_chr3_-_157823531 AK309293	217469	-	HQ258019 AJ002367 TSC_hg19_v1_chr3_-_157823847 BC008829 NM_001163678 NM_003030 NM_006884	217813	-	TSC_hg19_v1_chr3_+_157827910 AK290334 BC006982 NM_016625 AF208853 BC010357	221821	+	NM_001099777|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130001|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130002|C3orf55|152078|chromosome 3 open reading frame 55##NM_001243729|C3orf55|152078|chromosome 3 open reading frame 55##BC126187|C3orf55|152078|chromosome 3 open reading frame 55##BC126189|C3orf55|152078|chromosome 3 open reading frame 55##BC144066|C3orf55|152078|chromosome 3 open reading frame 55##BC029129|C3orf55|152078|chromosome 3 open reading frame 55##BC010062|C3orf55|152078|chromosome 3 open reading frame 55##BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##HQ258019|SHOX2|6474|short stature homeobox 2##AJ002367|SHOX2|6474|short stature homeobox 2##BC008829|SHOX2|6474|short stature homeobox 2##NM_001163678|SHOX2|6474|short stature homeobox 2##NM_003030|SHOX2|6474|short stature homeobox 2##NM_006884|SHOX2|6474|short stature homeobox 2##AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1##NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1##AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1	0.0	
chr8	103135397	103135577	reg1022844.p2	3.751	+	NM_032041	-332049	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-332287	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-332304	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	1036	-	NM_001040630	1647	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	115686	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.0	
chr10	75648915	75649050	reg1032910.p1	3.750	+	AB590440 L07044 DQ892365 DQ895574 DQ896692 TSC_hg19_v1_chr10_-_75634275 U66064 AK131199 AK095576 BC034044 AK225771 AK291704 AK301180 NM_001204492 NM_001222 NM_172169 NM_172170 NM_172171 NM_172173	-14663	-	TSC_hg19_v1_chr10_-_75571579 BC018681 AK303648 NM_003635	-77417	-	BC035711 TSC_hg19_v1_chr10_-_75571357 BC052780	-77608	-	NM_001145031 NM_002658 TSC_hg19_v1_chr10_+_75670889 AK297940 AK298560 AK312960	21895	+	BC013575 K03226 M15476 D00244 TSC_hg19_v1_chr10_+_75670948 X02760	21959	+	AB208961 TSC_hg19_v1_chr10_+_75673428	24405	+	L07044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ892365|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ895574|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ896692|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##U66064|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK131199|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK095576|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##BC034044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK225771|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK291704|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK301180|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001204492|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001222|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172169|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172170|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172171|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172173|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##BC018681|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##AK303648|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##NM_003635|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##BC035711|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##NM_001145031|PLAU|5328|plasminogen activator, urokinase##NM_002658|PLAU|5328|plasminogen activator, urokinase##AK297940|PLAU|5328|plasminogen activator, urokinase##AK298560|PLAU|5328|plasminogen activator, urokinase##AK312960|PLAU|5328|plasminogen activator, urokinase##BC013575|PLAU|5328|plasminogen activator, urokinase##K03226|PLAU|5328|plasminogen activator, urokinase##M15476|PLAU|5328|plasminogen activator, urokinase##D00244|PLAU|5328|plasminogen activator, urokinase##X02760|PLAU|5328|plasminogen activator, urokinase##AB208961|PLAU|5328|plasminogen activator, urokinase	0.0	
chr10	85133611	85133707	reg1036415.p1	3.750	+	DQ857894 NM_001165973	-1496217	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	-1498577	+	AK123978 NM_001145719	-2833085	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	765598	+	BC033760 BC051760 TSC_hg19_v1_chr10_-_85931861	798133	-	NM_207373 TSC_hg19_v1_chr10_+_85933558 AY358751	799900	+	DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein##BC033760|LOC642934|642934|uncharacterized LOC642934##BC051760|LOC642934|642934|uncharacterized LOC642934##NM_207373|C10orf99|387695|chromosome 10 open reading frame 99##AY358751|C10orf99|387695|chromosome 10 open reading frame 99	0.988644	CTCF.p2:0:0.989
chr1	155904063	155904149	reg1034857.p1	3.750	+	TSC_hg19_v1_chr1_-_155881164 AK314239 NM_006912 AK298768	-22922	-	BC104186 BC104187 AF084462 U71203 U78165 Y07566 TSC_hg19_v1_chr1_-_155881141	-23002	-	TSC_hg19_v1_chr1_+_155853548 AK026178	-50533	+	TSC_hg19_v1_chr1_-_155904168 AY112680 AY112681 AY112682	49	-	TSC_hg19_v1_chr1_-_155904178 AK289902	71	-	TSC_hg19_v1_chr1_-_155904186 BC062637 NM_014949	80	-	AK314239|RIT1|6016|Ras-like without CAAX 1##NM_006912|RIT1|6016|Ras-like without CAAX 1##AK298768|RIT1|6016|Ras-like without CAAX 1##BC104186|RIT1|6016|Ras-like without CAAX 1##BC104187|RIT1|6016|Ras-like without CAAX 1##AF084462|RIT1|6016|Ras-like without CAAX 1##U71203|RIT1|6016|Ras-like without CAAX 1##U78165|RIT1|6016|Ras-like without CAAX 1##Y07566|RIT1|6016|Ras-like without CAAX 1##AK026178|SYT11|23208|synaptotagmin XI##AY112680|KIAA0907|22889|KIAA0907##AY112681|KIAA0907|22889|KIAA0907##AY112682|KIAA0907|22889|KIAA0907##AK289902|KIAA0907|22889|KIAA0907##BC062637|KIAA0907|22889|KIAA0907##NM_014949|KIAA0907|22889|KIAA0907	0.0	
chr12	127593549	127593632	reg1003729.p2	3.750	+	NM_052907	-1782429	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-2043522	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-2043649	+	NM_001136103	1158357	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	1714853	-	BC043528 TSC_hg19_v1_chr12_+_129337985	1744394	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.330062	CTCF.p2:-22:0.330
chr1	243216490	243216578	reg1039949.p1	3.750	+	AK098092 NM_152666	-528537	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	-603764	-	BC132986 BC132988 AF276659 BC127722 NM_001004343	-1054160	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	201822	-	TSC_hg19_v1_chr1_-_243418566 AK310003 BC050722	202038	-	TSC_hg19_v1_chr1_-_243418675 NM_001042404 NM_001042405 NM_014812	202157	-	AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa##AK310003|CEP170|9859|centrosomal protein 170kDa##BC050722|CEP170|9859|centrosomal protein 170kDa##NM_001042404|CEP170|9859|centrosomal protein 170kDa##NM_001042405|CEP170|9859|centrosomal protein 170kDa##NM_014812|CEP170|9859|centrosomal protein 170kDa	0.014287	
chr13	98312002	98312125	reg1038800.p1	3.750	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	-225361	+	TSC_hg19_v1_chr13_+_98086350 AK315139 NM_021033 BC041333	-225626	+	TSC_hg19_v1_chr13_+_97999294 AF339832	-312769	+	NM_002271 BC045640	293874	+	TSC_hg19_v1_chr13_+_98628928 BX648222 AK303494 AK225286 BC001497 BC019309 DQ893033 EU176755 U72761	316769	+	TSC_hg19_v1_chr13_+_98795412 NM_001001715 NM_005766	483358	+	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family##AK315139|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_021033|RAP2A|5911|RAP2A, member of RAS oncogene family##BC041333|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_002271|IPO5|3843|importin 5##BC045640|IPO5|3843|importin 5##BX648222|IPO5|3843|importin 5##AK303494|IPO5|3843|importin 5##AK225286|IPO5|3843|importin 5##BC001497|IPO5|3843|importin 5##BC019309|IPO5|3843|importin 5##DQ893033|IPO5|3843|importin 5##EU176755|IPO5|3843|importin 5##U72761|IPO5|3843|importin 5##NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	0.912169	CTCF.p2:2:0.912
chr14	97132607	97132714	reg1033815.p2	3.750	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-163876	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-163914	+	TSC_hg19_v1_chr14_+_96968718 NM_001252006 NM_001252007 NM_032632 AK302406 BC036014	-163951	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	131055	+	AK098639 NM_182560	2045289	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	2604957	-	BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##NM_001252006|PAPOLA|10914|poly(A) polymerase alpha##NM_001252007|PAPOLA|10914|poly(A) polymerase alpha##NM_032632|PAPOLA|10914|poly(A) polymerase alpha##AK302406|PAPOLA|10914|poly(A) polymerase alpha##BC036014|PAPOLA|10914|poly(A) polymerase alpha##NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.515453	CTCF.p2:-6:0.515
chr1	56572313	56572493	reg1029004.p1	3.750	+	TSC_hg19_v1_chr1_+_55681088 BC040313	-891319	+	TSC_hg19_v1_chr1_-_55681045 NM_015306	-891367	-	TSC_hg19_v1_chr1_+_55505220 AK075365	-1067179	+	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	472616	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	472727	-	AK312439 TSC_hg19_v1_chr1_-_57045216	472814	-	BC040313|LOC100507634|100507634|uncharacterized LOC100507634##NM_015306|USP24|23358|ubiquitin specific peptidase 24##AK075365|PCSK9|255738|proprotein convertase subtilisin/kexin type 9##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B	0.0	
chr20	46131631	46131798	reg1039403.p2	3.750	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1030	+	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	-1092	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-146226	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	283038	-	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	283604	-	AB037836 TSC_hg19_v1_chr20_-_47444291	1312572	-	AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1	0.0	
chr2	223447792	223447895	reg1030466.p1	3.750	+	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	-158536	+	TSC_hg19_v1_chr2_+_223289261 AK314322	-158603	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	-284318	-	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	72951	-	TSC_hg19_v1_chr2_+_223536376 AF384163 NM_058165	88566	+	TSC_hg19_v1_chr2_+_223725753 NM_004457 NM_203372 BC041692 AK314621 AB061712	277904	+	AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AK314322|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF384163|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_058165|MOGAT1|116255|monoacylglycerol O-acyltransferase 1##NM_004457|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##NM_203372|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##BC041692|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AK314621|ACSL3|2181|acyl-CoA synthetase long-chain family member 3##AB061712|ACSL3|2181|acyl-CoA synthetase long-chain family member 3	0.0	
chr2	98629346	98629526	reg1029064.p2	3.750	+	TSC_hg19_v1_chr2_-_98612395 AK098792	-17033	-	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	-17250	-	AK025852 TSC_hg19_v1_chr2_-_98408976	-220514	-	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	74210	+	DQ426863 NM_001079878 NM_001298 DQ067460	333197	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	333469	+	AK098792|TMEM131|23505|transmembrane protein 131##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##AK025852|TMEM131|23505|transmembrane protein 131##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3	0.0	
chr3	16465486	16465658	reg1040208.p1	3.750	+	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-158864	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	-159183	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-249378	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	89446	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	89652	-	BX648638 AK303026 NM_001190811	180698	-	NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like	0.0	
chr3	33478799	33478940	reg1034014.p1	3.750	+	TSC_hg19_v1_chr3_+_33318965 AK001271 NM_012157 AK302218 NM_001171713 AK303764 AK299665 AK294209 AF174589 AK316229 AK001438 AK298967 AK297534 AF186273 BC031556	-159919	+	AB011099 NM_015551	-218163	-	TSC_hg19_v1_chr3_+_33155562 AJ006470 CU679079 DQ893221 DQ896550	-323296	+	AK023274 AF198487 TSC_hg19_v1_chr3_-_33481564	2667	-	TSC_hg19_v1_chr3_-_33481868 BC047235 NM_001128160 NM_014517	2996	-	TSC_hg19_v1_chr3_-_33481898 AK293100 NM_001128161	3031	-	AK001271|FBXL2|25827|F-box and leucine-rich repeat protein 2##NM_012157|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK302218|FBXL2|25827|F-box and leucine-rich repeat protein 2##NM_001171713|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK303764|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK299665|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK294209|FBXL2|25827|F-box and leucine-rich repeat protein 2##AF174589|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK316229|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK001438|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK298967|FBXL2|25827|F-box and leucine-rich repeat protein 2##AK297534|FBXL2|25827|F-box and leucine-rich repeat protein 2##AF186273|FBXL2|25827|F-box and leucine-rich repeat protein 2##BC031556|FBXL2|25827|F-box and leucine-rich repeat protein 2##AB011099|SUSD5|26032|sushi domain containing 5##NM_015551|SUSD5|26032|sushi domain containing 5##AJ006470|CRTAP|10491|cartilage associated protein##DQ893221|CRTAP|10491|cartilage associated protein##DQ896550|CRTAP|10491|cartilage associated protein##AK023274|UBP1|7342|upstream binding protein 1 (LBP-1a)##AF198487|UBP1|7342|upstream binding protein 1 (LBP-1a)##BC047235|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_001128160|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_014517|UBP1|7342|upstream binding protein 1 (LBP-1a)##AK293100|UBP1|7342|upstream binding protein 1 (LBP-1a)##NM_001128161|UBP1|7342|upstream binding protein 1 (LBP-1a)	0.0	
chr3	5191615	5191690	reg1035640.p2	3.750	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	-27561	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	-27697	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-170298	+	TSC_hg19_v1_chr3_+_5229344 AK298511	37675	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	37711	+	TSC_hg19_v1_chr3_+_5229430 D86967	37781	+	AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	0.0	
chr6	107401393	107401492	reg1040052.p1	3.750	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	-51970	+	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	-323945	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	-324162	-	BC131628 NM_001080450	34193	-	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	379288	-	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	409986	+	NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203##NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)	0.0	
chr10	112575433	112575582	reg1040137.p1	3.749	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-171378	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-231392	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-248015	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	56105	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	56207	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	103189	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.0	
chr11	13338082	13338242	reg1030493.p2	3.749	+	TSC_hg19_v1_chr11_+_13299403 BC031214 BC034314	-38707	+	TSC_hg19_v1_chr11_+_13299376 AF044288 AK095749	-38780	+	TSC_hg19_v1_chr11_+_13299375 U60415	-38789	+	AK298226 TSC_hg19_v1_chr11_-_13484770 AK310935 AK292392 AK095946 BC005071 AL832981 NM_032320 AF329102	146629	-	V00597 BC096142 BC096143 BC096144 BC096145 NM_000315	179383	-	TSC_hg19_v1_chr11_+_13690212 NM_032228 AY358784	352028	+	BC031214|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AF044288|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK095749|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##U60415|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK298226|BTBD10|84280|BTB (POZ) domain containing 10##AK310935|BTBD10|84280|BTB (POZ) domain containing 10##AK292392|BTBD10|84280|BTB (POZ) domain containing 10##AK095946|BTBD10|84280|BTB (POZ) domain containing 10##BC005071|BTBD10|84280|BTB (POZ) domain containing 10##AL832981|BTBD10|84280|BTB (POZ) domain containing 10##NM_032320|BTBD10|84280|BTB (POZ) domain containing 10##AF329102|BTBD10|84280|BTB (POZ) domain containing 10##V00597|PTH|5741|parathyroid hormone##BC096142|PTH|5741|parathyroid hormone##BC096143|PTH|5741|parathyroid hormone##BC096144|PTH|5741|parathyroid hormone##BC096145|PTH|5741|parathyroid hormone##NM_000315|PTH|5741|parathyroid hormone##NM_032228|FAR1|84188|fatty acyl CoA reductase 1##AY358784|FAR1|84188|fatty acyl CoA reductase 1	0.0	
chr1	2053310	2053418	reg1033044.p2	3.749	+	NM_001033582	-17210	+	NM_001242874 AK294782	-47897	+	AK294649 NM_001033581	-48280	+	TSC_hg19_v1_chr1_-_2126212 BC041041 AF469129 BC066360 AK055593 BC103992 NM_182533	72815	-	AK127994 NM_001146310	85807	-	NM_003036 X15218 TSC_hg19_v1_chr1_+_2160159	106805	+	NM_001033582|PRKCZ|5590|protein kinase C, zeta##NM_001242874|PRKCZ|5590|protein kinase C, zeta##AK294782|PRKCZ|5590|protein kinase C, zeta##AK294649|PRKCZ|5590|protein kinase C, zeta##NM_001033581|PRKCZ|5590|protein kinase C, zeta##BC041041|C1orf86|199990|chromosome 1 open reading frame 86##AF469129|C1orf86|199990|chromosome 1 open reading frame 86##BC066360|C1orf86|199990|chromosome 1 open reading frame 86##AK055593|C1orf86|199990|chromosome 1 open reading frame 86##BC103992|C1orf86|199990|chromosome 1 open reading frame 86##NM_182533|C1orf86|199990|chromosome 1 open reading frame 86##AK127994|C1orf86|199990|chromosome 1 open reading frame 86##NM_001146310|C1orf86|199990|chromosome 1 open reading frame 86##NM_003036|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)##X15218|SKI|6497|v-ski sarcoma viral oncogene homolog (avian)	0.0	
chr12	791713	791888	reg1030609.p1	3.749	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-19085	-	TSC_hg19_v1_chr12_-_752800 AK298043	-38981	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-39622	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	70356	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	70956	+	BC013629 TSC_hg19_v1_chr12_+_1017145	225282	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr13	111577659	111577808	reg1034198.p2	3.749	+	AK000100 NM_017664 TSC_hg19_v1_chr13_-_111567417	-10317	-	TSC_hg19_v1_chr13_-_111567375 BC001727 AK096083 BC039715	-10368	-	CU674848 CU691752 TSC_hg19_v1_chr13_-_111567293	-10446	-	TSC_hg19_v1_chr13_+_111767658 BC060776 NM_001113511 NM_001113512 NM_145735 BC033905 AL834228 CU687414 CU689800 EU832819 GQ129214	189996	+	AK300157 TSC_hg19_v1_chr13_+_111806035	228303	+	TSC_hg19_v1_chr13_+_111806041 AB177849 NM_003899	228318	+	AK000100|ANKRD10|55608|ankyrin repeat domain 10##NM_017664|ANKRD10|55608|ankyrin repeat domain 10##BC001727|ANKRD10|55608|ankyrin repeat domain 10##AK096083|ANKRD10|55608|ankyrin repeat domain 10##BC039715|ANKRD10|55608|ankyrin repeat domain 10##BC060776|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113511|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113512|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_145735|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC033905|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AL834228|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##EU832819|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##GQ129214|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK300157|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AB177849|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_003899|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7	0.974076	CTCF.p2:-2:0.974
chr13	59752634	59752742	reg1034869.p1	3.749	+	TSC_hg19_v1_chr13_+_58207858 AK307545	-1544792	+	AF029343 AK289980 TSC_hg19_v1_chr13_+_58205949	-1546741	+	NM_001040429	-1546900	+	BC041395 TSC_hg19_v1_chr13_-_60325215	572456	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	834632	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	985293	-	AK307545|PCDH17|27253|protocadherin 17##AF029343|PCDH17|27253|protocadherin 17##AK289980|PCDH17|27253|protocadherin 17##NM_001040429|PCDH17|27253|protocadherin 17##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)	0.975143	CTCF.p2:-16:0.975
chr14	91871549	91871687	reg1036319.p2	3.749	+	BC098567 NM_003485	-151424	-	BC128536 NM_001177676	-160767	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-290591	+	TSC_hg19_v1_chr14_-_91884159 AF070587	12530	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	12557	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	104882	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.780296	CTCF.p2:17:0.780
chr16	23837889	23838070	reg1035983.p2	3.749	+	AF146019 NM_022097 AK313062	-71960	+	AK131280 NM_033266	-113159	-	GQ129249 GQ129250 TSC_hg19_v1_chr16_-_23724544 AK309313 AK310834 EF560720 EF560739 AB047079	-113442	-	TSC_hg19_v1_chr16_+_23847303 NM_002738 NM_212535	9315	+	TSC_hg19_v1_chr16_+_23847321 BC036472	9353	+	X06318 X07109 TSC_hg19_v1_chr16_+_23847360 M13975	9416	+	AF146019|CHP2|63928|calcineurin B homologous protein 2##NM_022097|CHP2|63928|calcineurin B homologous protein 2##AK313062|CHP2|63928|calcineurin B homologous protein 2##AK131280|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##NM_033266|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##GQ129249|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##GQ129250|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AK309313|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AK310834|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##EF560720|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##EF560739|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##AB047079|ERN2|10595|endoplasmic reticulum to nucleus signaling 2##NM_002738|PRKCB|5579|protein kinase C, beta##NM_212535|PRKCB|5579|protein kinase C, beta##BC036472|PRKCB|5579|protein kinase C, beta##X06318|PRKCB|5579|protein kinase C, beta##X07109|PRKCB|5579|protein kinase C, beta##M13975|PRKCB|5579|protein kinase C, beta	0.0	
chr17	3868601	3868749	reg1027943.p2	3.749	+	AB462957 DQ893317 EU176809 Z69881 TSC_hg19_v1_chr17_-_3867744 AF068220 BC035729 AK292716 NM_005173 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958	-974	-	NM_002558	-48716	-	X83688 U45448 BC044657 BC027949 TSC_hg19_v1_chr17_-_3819762 AK310981 AK313264 AF020498	-48927	-	AB384472 TSC_hg19_v1_chr17_-_4046240	177540	-	TSC_hg19_v1_chr17_-_4046246 AB007859 BC151836 NM_015113	177577	-	TSC_hg19_v1_chr17_-_4046308 AK127482	177635	-	DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_002558|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##X83688|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##U45448|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC044657|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC027949|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AK313264|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AF020498|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	0.0	
chr17	4635089	4635183	reg1040061.p2	3.749	+	BC070377 NM_001001683 TSC_hg19_v1_chr17_+_4634722 AF161414	-400	+	TSC_hg19_v1_chr17_+_4613946 BC007427 BC067368 AF106941 CR749218 AB209786 AK290951 AK297181 BC095450 DQ893226 DQ896556 EU176778 AB527599 CR450310 DQ664180 EU883572 Z11501 BC039066	-21158	+	TSC_hg19_v1_chr17_+_4613926 NM_004313 NM_199004 AK297059 AK097542	-21282	+	AF337812 AB463490 CU676014 AF275260 TSC_hg19_v1_chr17_-_4643066 BC044930 AK292114 AY358909 AF301016 AK027389	7754	-	TSC_hg19_v1_chr17_-_4643224 BC017588 AK315017 NM_001100812 NM_022059	8083	-	AK302181 NM_001136046 AK310469 AL136893 NM_032265	8191	+	BC070377|MED11|400569|mediator complex subunit 11##NM_001001683|MED11|400569|mediator complex subunit 11##AF161414|MED11|400569|mediator complex subunit 11##BC007427|ARRB2|409|arrestin, beta 2##BC067368|ARRB2|409|arrestin, beta 2##AF106941|ARRB2|409|arrestin, beta 2##CR749218|ARRB2|409|arrestin, beta 2##AB209786|ARRB2|409|arrestin, beta 2##AK290951|ARRB2|409|arrestin, beta 2##AK297181|ARRB2|409|arrestin, beta 2##BC095450|ARRB2|409|arrestin, beta 2##DQ893226|ARRB2|409|arrestin, beta 2##DQ896556|ARRB2|409|arrestin, beta 2##EU176778|ARRB2|409|arrestin, beta 2##CR450310|ARRB2|409|arrestin, beta 2##DQ664180|ARRB2|409|arrestin, beta 2##EU883572|ARRB2|409|arrestin, beta 2##Z11501|ARRB2|409|arrestin, beta 2##BC039066|ARRB2|409|arrestin, beta 2##NM_004313|ARRB2|409|arrestin, beta 2##NM_199004|ARRB2|409|arrestin, beta 2##AK297059|ARRB2|409|arrestin, beta 2##AK097542|ARRB2|409|arrestin, beta 2##AF337812|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AF275260|CXCL16|58191|chemokine (C-X-C motif) ligand 16##BC044930|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AK292114|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AY358909|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AF301016|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AK027389|CXCL16|58191|chemokine (C-X-C motif) ligand 16##BC017588|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AK315017|CXCL16|58191|chemokine (C-X-C motif) ligand 16##NM_001100812|CXCL16|58191|chemokine (C-X-C motif) ligand 16##NM_022059|CXCL16|58191|chemokine (C-X-C motif) ligand 16##AK302181|ZMYND15|84225|zinc finger, MYND-type containing 15##NM_001136046|ZMYND15|84225|zinc finger, MYND-type containing 15##AK310469|ZMYND15|84225|zinc finger, MYND-type containing 15##AL136893|ZMYND15|84225|zinc finger, MYND-type containing 15##NM_032265|ZMYND15|84225|zinc finger, MYND-type containing 15	0.182901	
chr19	16723132	16723305	reg1035454.p2	3.749	+	TSC_hg19_v1_chr19_+_16683381 AK094229	-39821	+	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	-40022	-	TSC_hg19_v1_chr19_-_16653256 NM_006387	-69955	-	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	15782	-	TSC_hg19_v1_chr19_-_16770944 AK025602 BC069279 BX648276	47711	-	TSC_hg19_v1_chr19_-_16770956 NM_024104	47744	-	BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##NM_006387|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26##AK025602|C19orf42|79086|chromosome 19 open reading frame 42##BC069279|C19orf42|79086|chromosome 19 open reading frame 42##BX648276|C19orf42|79086|chromosome 19 open reading frame 42##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42	0.0	
chr20	32610337	32610408	reg1014261.p2	3.749	+	AK291079 TSC_hg19_v1_chr20_+_32581883 AK291054	-28489	+	TSC_hg19_v1_chr20_+_32581743 AF148457 AK222915 L38696 BC105018	-28577	+	TSC_hg19_v1_chr20_+_32581716 BC103753 AK299766	-28668	+	AB451237 AB451362 BT009795 CR456734 CU674464 AB590122 TSC_hg19_v1_chr20_-_32700021 AB208966 M29536 BC107588 BC000934 AK313025 BC000461	89624	-	TSC_hg19_v1_chr20_-_32700082 NM_003908	89713	-	NM_001672 BC104238 BC104239	237802	+	AK291079|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK291054|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AF148457|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK222915|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##L38696|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC105018|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##BC103753|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AK299766|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##AB451237|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB451362|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BT009795|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##CR456734|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AB208966|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##M29536|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC107588|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000934|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##AK313025|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##BC000461|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##NM_003908|EIF2S2|8894|eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa##NM_001672|ASIP|434|agouti signaling protein##BC104238|ASIP|434|agouti signaling protein##BC104239|ASIP|434|agouti signaling protein	0.0	
chr20	42381210	42381389	reg1035707.p1	3.749	+	BC040049 AK058060 NM_001008901 NM_176791	-25696	-	TSC_hg19_v1_chr20_+_42295753 AK303249 AK314791 BC053555 X13293 AB528519 AK223482 DQ893522 DQ895945	-85464	+	NM_002466 TSC_hg19_v1_chr20_+_42295720 BC007585	-85578	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	162188	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	163494	+	NM_001098798	193236	+	BC040049|GTSF1L|149699|gametocyte specific factor 1-like##AK058060|GTSF1L|149699|gametocyte specific factor 1-like##NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like##NM_176791|GTSF1L|149699|gametocyte specific factor 1-like##AK303249|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK314791|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC053555|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##X13293|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##AK223482|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ893522|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##DQ895945|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_002466|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##BC007585|MYBL2|4605|v-myb myeloblastosis viral oncogene homolog (avian)-like 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098798|TOX2|84969|TOX high mobility group box family member 2	0.0	
chr5	172192391	172192571	reg1033528.p2	3.749	+	AF275799 TSC_hg19_v1_chr5_-_172083715	-108838	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-124228	+	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	-310978	-	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	5730	-	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	68837	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	193967	+	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1	0.0	
chr5	58676251	58676397	reg1011864.p1	3.749	+	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	-23581	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	-104394	-	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	-340946	-	U50159 NM_006203 L20970	205975	-	AJ250854 BT007398 TSC_hg19_v1_chr5_-_59064363	388024	-	NM_001197218 AF012073 BC008390 TSC_hg19_v1_chr5_-_59064472	388131	-	AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50159|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_006203|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##L20970|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AJ250854|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BT007398|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197218|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012073|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##BC008390|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.0	
chr5	59995534	59995680	reg1036887.p1	3.749	+	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	-211567	+	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	-211703	-	NM_001104631	-805987	-	TSC_hg19_v1_chr5_-_59995928 AF490257	309	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	358	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	144464	-	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF490257|DEPDC1B|55789|DEP domain containing 1B##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7	0.232078	CTCF.p2:14:0.232
chr6	686708	686846	reg1039423.p1	3.749	+	AF508547 BC101697 BC101699 NM_148959	-29824	-	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	-295013	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-394280	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	6313	-	BC053850 NM_033260	625897	+	NM_001452 U13220 AB463646	703348	+	AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2	0.041575	
chr8	11396764	11396910	reg1028666.p2	3.749	+	S76617 NM_001715 BC018703 BC004473 BC038555	-45244	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-72608	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-191833	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	164883	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	230431	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	263347	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.0	
chr8	134539115	134539295	reg1035436.p2	3.749	+	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-229708	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-335875	+	NM_001045556 NM_001045557	-423896	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	44892	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1169589	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1185874	-	AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr8	77500129	77500245	reg1032741.p1	3.749	+	BX571750 NM_004133 EU832451 HQ692842	-1047973	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	-1179999	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-1603278	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	93323	+	AB083343 TSC_hg19_v1_chr8_+_77593533	93341	+	AK131399 TSC_hg19_v1_chr8_+_77765961	265702	+	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4##AB083343|ZFHX4|79776|zinc finger homeobox 4##AK131399|ZFHX4|79776|zinc finger homeobox 4	0.0	
chr9	136036472	136036582	reg1039432.p1	3.749	+	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	-11841	-	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	-40028	-	NM_001807 S79774 M85201 BC042510 AK299965	-99152	+	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	2770	-	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	48093	-	AF134412 AF134413 AF134414 AF134415 AF134416 BC069595 BC069605 BC069814 BC111575 DQ139865 FR691751 FR691752 J05175 JN791441 CU686922 AK302203 TSC_hg19_v1_chr9_-_136150618	114087	-	AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B##AF134412|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134413|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134414|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134415|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134416|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069595|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069605|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069814|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC111575|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##DQ139865|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691751|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691752|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##J05175|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##JN791441|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AK302203|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)	0.0	
chr10	18883642	18883746	reg1022414.p1	3.748	+	NM_201570 AK299873 AK295113	-194131	+	AK310943 NM_201590	-254081	+	NM_000724 AB208917 U95019	-334054	+	AK074323 BC035778 NM_182543	56838	-	BC033534 TSC_hg19_v1_chr10_-_18948215	64503	-	TSC_hg19_v1_chr10_+_18948359 NM_178815 BC024163 AK027275 AF494061 DQ893166 DQ896464	64727	+	NM_201570|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK299873|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK295113|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK310943|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201590|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK074323|NSUN6|221078|NOP2/Sun domain family, member 6##BC035778|NSUN6|221078|NOP2/Sun domain family, member 6##NM_182543|NSUN6|221078|NOP2/Sun domain family, member 6##NM_178815|ARL5B|221079|ADP-ribosylation factor-like 5B##BC024163|ARL5B|221079|ADP-ribosylation factor-like 5B##AK027275|ARL5B|221079|ADP-ribosylation factor-like 5B##AF494061|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ893166|ARL5B|221079|ADP-ribosylation factor-like 5B##DQ896464|ARL5B|221079|ADP-ribosylation factor-like 5B	0.034252	
chr1	32715777	32715957	reg1025889.p2	3.748	+	NM_032648 BC004269	-3042	+	TSC_hg19_v1_chr1_-_32707234 AL833686 AK055560	-8612	-	TSC_hg19_v1_chr1_+_32688054 AB590351 BC003140 BT019597 CU678398 DQ891249 DQ894600	-27772	+	NM_005356 TSC_hg19_v1_chr1_+_32716847 AK098027 X05027 U23852 M36881 X13529	1018	+	NM_001042771 BC013200 AK303073 U07236 CU680550 DQ891675 DQ894861 AB527809 AJ865079 AF228313	23973	+	AK225555 TSC_hg19_v1_chr1_+_32757704 AK296308 AK313061	41836	+	NM_032648|FAM167B|84734|family with sequence similarity 167, member B##BC004269|FAM167B|84734|family with sequence similarity 167, member B##AL833686|MTMR9LP|339483|myotubularin related protein 9-like, pseudogene##AK055560|MTMR9LP|339483|myotubularin related protein 9-like, pseudogene##BC003140|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##BT019597|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##DQ891249|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##DQ894600|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##NM_005356|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK098027|LCK|3932|lymphocyte-specific protein tyrosine kinase##X05027|LCK|3932|lymphocyte-specific protein tyrosine kinase##U23852|LCK|3932|lymphocyte-specific protein tyrosine kinase##M36881|LCK|3932|lymphocyte-specific protein tyrosine kinase##X13529|LCK|3932|lymphocyte-specific protein tyrosine kinase##NM_001042771|LCK|3932|lymphocyte-specific protein tyrosine kinase##BC013200|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK303073|LCK|3932|lymphocyte-specific protein tyrosine kinase##U07236|LCK|3932|lymphocyte-specific protein tyrosine kinase##DQ891675|LCK|3932|lymphocyte-specific protein tyrosine kinase##DQ894861|LCK|3932|lymphocyte-specific protein tyrosine kinase##AJ865079|LCK|3932|lymphocyte-specific protein tyrosine kinase##AF228313|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK225555|HDAC1|3065|histone deacetylase 1##AK296308|HDAC1|3065|histone deacetylase 1##AK313061|HDAC1|3065|histone deacetylase 1	0.0	
chr13	43122901	43123052	reg1024626.p1	3.748	+	TSC_hg19_v1_chr13_+_42846292 AF176555 NM_016248	-276691	+	AK302727 NM_001204505 NM_001204506 AK122909 AK302631 BC043292 BC044822	-410766	+	NM_152910 NM_178009 AB078967 AB078968	-500111	+	BC040889 NM_033012	13895	+	TSC_hg19_v1_chr13_+_43148289 NM_003701 AF019047 AB064268 AB064269 AB064270 BC117286 BC117288 BC074823 BC074890 HQ258604 AB061227	25358	+	NM_182508 AK310859 AK098238 BC093659 BC112237	232748	+	AF176555|AKAP11|11215|A kinase (PRKA) anchor protein 11##NM_016248|AKAP11|11215|A kinase (PRKA) anchor protein 11##AK302727|DGKH|160851|diacylglycerol kinase, eta##NM_001204505|DGKH|160851|diacylglycerol kinase, eta##NM_001204506|DGKH|160851|diacylglycerol kinase, eta##AK122909|DGKH|160851|diacylglycerol kinase, eta##AK302631|DGKH|160851|diacylglycerol kinase, eta##BC043292|DGKH|160851|diacylglycerol kinase, eta##BC044822|DGKH|160851|diacylglycerol kinase, eta##NM_152910|DGKH|160851|diacylglycerol kinase, eta##NM_178009|DGKH|160851|diacylglycerol kinase, eta##AB078967|DGKH|160851|diacylglycerol kinase, eta##AB078968|DGKH|160851|diacylglycerol kinase, eta##BC040889|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_033012|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_003701|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AF019047|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064268|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064269|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB064270|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117286|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC117288|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074823|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##BC074890|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##HQ258604|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##AB061227|TNFSF11|8600|tumor necrosis factor (ligand) superfamily, member 11##NM_182508|C13orf30|144809|chromosome 13 open reading frame 30##AK310859|C13orf30|144809|chromosome 13 open reading frame 30##AK098238|C13orf30|144809|chromosome 13 open reading frame 30##BC093659|C13orf30|144809|chromosome 13 open reading frame 30##BC112237|C13orf30|144809|chromosome 13 open reading frame 30	0.0	
chr1	40235903	40236013	reg1037522.p1	3.748	+	AK130628 TSC_hg19_v1_chr1_+_40204563 AK293094 BC004898 AB464008 CU678794 DQ160195	-31391	+	NM_001195007 NM_006112 NM_203456 TSC_hg19_v1_chr1_+_40204553 AK313666 BC008451 AL833576 AF104012 AF104013 AK094660 AK304694 BC107736	-31420	+	TSC_hg19_v1_chr1_-_40157103 BC030827 AL136591 NM_016257 AK294412 AK312314 AK294813	-78856	-	AK314586 DQ893340 DQ896660 BC030015 AB050193 AK093089 AX747914 BC072388 AY013700 NM_022120	1014	-	BC023526 TSC_hg19_v1_chr1_-_40254233	18231	-	TSC_hg19_v1_chr1_-_40254516 BC108678	18557	-	AK130628|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK293094|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC004898|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##DQ160195|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_001195007|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_006112|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##NM_203456|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK313666|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC008451|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AL833576|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104012|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AF104013|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK094660|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##AK304694|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC107736|PPIE|10450|peptidylprolyl isomerase E (cyclophilin E)##BC030827|HPCAL4|51440|hippocalcin like 4##AL136591|HPCAL4|51440|hippocalcin like 4##NM_016257|HPCAL4|51440|hippocalcin like 4##AK294412|HPCAL4|51440|hippocalcin like 4##AK312314|HPCAL4|51440|hippocalcin like 4##AK294813|HPCAL4|51440|hippocalcin like 4##AK314586|OXCT2|64064|3-oxoacid CoA transferase 2##DQ893340|OXCT2|64064|3-oxoacid CoA transferase 2##DQ896660|OXCT2|64064|3-oxoacid CoA transferase 2##BC030015|OXCT2|64064|3-oxoacid CoA transferase 2##AB050193|OXCT2|64064|3-oxoacid CoA transferase 2##AK093089|OXCT2|64064|3-oxoacid CoA transferase 2##BC072388|OXCT2|64064|3-oxoacid CoA transferase 2##AY013700|OXCT2|64064|3-oxoacid CoA transferase 2##NM_022120|OXCT2|64064|3-oxoacid CoA transferase 2##BC023526|BMP8B|656|bone morphogenetic protein 8b##BC108678|BMP8B|656|bone morphogenetic protein 8b	0.871811	CTCF.p2:0:0.872
chr16	1392576	1392650	reg1041845.p1	3.748	+	AK299358 NM_001199096	-6416	+	AK294491 AK315059 NM_003933 BC104966 BC112129 AB018277 AB462958	-8030	+	NM_001199097 NM_001199098 NM_001199099 TSC_hg19_v1_chr16_+_1383645 AK294744 AK295645 AK299309 AL834321	-8983	+	TSC_hg19_v1_chr16_-_1401856 BC011785 BC017325 BC013943 BC016699 NM_001001410	9222	-	NM_032520 TSC_hg19_v1_chr16_+_1401931 AK312067	9303	+	TSC_hg19_v1_chr16_+_1401951 BC014592 DQ890827 DQ893981 AF302786 CU677055 AY203933 BC131525	9407	+	AK299358|BAIAP3|8938|BAI1-associated protein 3##NM_001199096|BAIAP3|8938|BAI1-associated protein 3##AK294491|BAIAP3|8938|BAI1-associated protein 3##AK315059|BAIAP3|8938|BAI1-associated protein 3##NM_003933|BAIAP3|8938|BAI1-associated protein 3##BC104966|BAIAP3|8938|BAI1-associated protein 3##BC112129|BAIAP3|8938|BAI1-associated protein 3##AB018277|BAIAP3|8938|BAI1-associated protein 3##NM_001199097|BAIAP3|8938|BAI1-associated protein 3##NM_001199098|BAIAP3|8938|BAI1-associated protein 3##NM_001199099|BAIAP3|8938|BAI1-associated protein 3##AK294744|BAIAP3|8938|BAI1-associated protein 3##AK295645|BAIAP3|8938|BAI1-associated protein 3##AK299309|BAIAP3|8938|BAI1-associated protein 3##AL834321|BAIAP3|8938|BAI1-associated protein 3##BC011785|C16orf42|115939|chromosome 16 open reading frame 42##BC017325|C16orf42|115939|chromosome 16 open reading frame 42##BC013943|C16orf42|115939|chromosome 16 open reading frame 42##BC016699|C16orf42|115939|chromosome 16 open reading frame 42##NM_001001410|C16orf42|115939|chromosome 16 open reading frame 42##NM_032520|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AK312067|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##BC014592|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##DQ890827|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##DQ893981|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AF302786|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##AY203933|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit##BC131525|GNPTG|84572|N-acetylglucosamine-1-phosphate transferase, gamma subunit	0.204288	
chr17	79677879	79677951	reg1038829.p2	3.748	+	TSC_hg19_v1_chr17_+_79670506 BC007497 U25041 EF036488	-7403	+	TSC_hg19_v1_chr17_+_79670396 NM_002949 AK297076 X79865 BC002344	-7476	+	TSC_hg19_v1_chr17_-_79670327 AK026523	-7585	-	TSC_hg19_v1_chr17_+_79679341 BC015797	1409	+	BC007355 NM_012140 TSC_hg19_v1_chr17_+_79679381 AK075249	1466	+	TSC_hg19_v1_chr17_+_79679402 AJ131613 DQ893263 DQ896592 CU675633	1512	+	BC007497|MRPL12|6182|mitochondrial ribosomal protein L12##U25041|MRPL12|6182|mitochondrial ribosomal protein L12##EF036488|MRPL12|6182|mitochondrial ribosomal protein L12##NM_002949|MRPL12|6182|mitochondrial ribosomal protein L12##X79865|MRPL12|6182|mitochondrial ribosomal protein L12##BC002344|MRPL12|6182|mitochondrial ribosomal protein L12##BC015797|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##BC007355|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##NM_012140|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##AK075249|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##AJ131613|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##DQ893263|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##DQ896592|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10	0.050552	
chr6	142859157	142859271	reg1037723.p2	3.748	+	TSC_hg19_v1_chr6_+_142623443 BX640873	-235808	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-236145	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-348585	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	407114	-	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	522781	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	522822	+	BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1	0.990894	CTCF.p2:12:0.959
chr6	33216198	33216283	reg1029708.p1	3.748	+	TSC_hg19_v1_chr6_+_33176276 AK289355 AK301010 AK301378 NM_002931 AK297552 BC002922 BC051866	-39957	+	BC008185 NM_014234 AB528151 AM393508 CU678883 BT007239 D82061	-43807	+	NM_001077516 NM_006979 AK301126 AK303158 TSC_hg19_v1_chr6_+_33168666 BC000645 AK225282 AK225682 D82060	-47577	+	AK300430 TSC_hg19_v1_chr6_-_33239466 AK222867	23213	-	AX775737 BC032108 TSC_hg19_v1_chr6_-_33239622 BC040114 BC013012 AK304080 AK299563 AK093057 AK300308 NM_022553 AK297935 AK001725	23421	-	BC106063 TSC_hg19_v1_chr6_+_33239853 NM_022551 X69150 BC070230 AB055778	23585	+	AK289355|RING1|6015|ring finger protein 1##AK301010|RING1|6015|ring finger protein 1##AK301378|RING1|6015|ring finger protein 1##NM_002931|RING1|6015|ring finger protein 1##AK297552|RING1|6015|ring finger protein 1##BC002922|RING1|6015|ring finger protein 1##BC051866|RING1|6015|ring finger protein 1##BC008185|HSD17B8|7923|hydroxysteroid (17-beta) dehydrogenase 8##NM_014234|HSD17B8|7923|hydroxysteroid (17-beta) dehydrogenase 8##AM393508|HSD17B8|7923|hydroxysteroid (17-beta) dehydrogenase 8##BT007239|HSD17B8|7923|hydroxysteroid (17-beta) dehydrogenase 8##D82061|HSD17B8|7923|hydroxysteroid (17-beta) dehydrogenase 8##NM_001077516|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7##NM_006979|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7##AK301126|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7##AK303158|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7##BC000645|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7##AK225282|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7##AK225682|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7##D82060|SLC39A7|7922|solute carrier family 39 (zinc transporter), member 7##AK300430|VPS52|6293|vacuolar protein sorting 52 homolog (S. cerevisiae)##AK222867|VPS52|6293|vacuolar protein sorting 52 homolog (S. cerevisiae)##AX775737|VPS52|6293|vacuolar protein sorting 52 homolog (S. cerevisiae)##BC032108|VPS52|6293|vacuolar protein sorting 52 homolog (S. cerevisiae)##BC040114|VPS52|6293|vacuolar protein sorting 52 homolog (S. cerevisiae)##AK304080|VPS52|6293|vacuolar protein sorting 52 homolog (S. cerevisiae)##AK299563|VPS52|6293|vacuolar protein sorting 52 homolog (S. cerevisiae)##AK093057|VPS52|6293|vacuolar protein sorting 52 homolog (S. cerevisiae)##AK300308|VPS52|6293|vacuolar protein sorting 52 homolog (S. cerevisiae)##NM_022553|VPS52|6293|vacuolar protein sorting 52 homolog (S. cerevisiae)##AK297935|VPS52|6293|vacuolar protein sorting 52 homolog (S. cerevisiae)##AK001725|VPS52|6293|vacuolar protein sorting 52 homolog (S. cerevisiae)##BC106063|RPS18|6222|ribosomal protein S18##NM_022551|RPS18|6222|ribosomal protein S18##X69150|RPS18|6222|ribosomal protein S18	0.960769	CTCF.p2:8:0.961
chr6	35370019	35370142	reg1038034.p1	3.748	+	TSC_hg19_v1_chr6_+_35310402 AK304482 L07592	-59671	+	TSC_hg19_v1_chr6_+_35310375 AK304878 AB099507 AK296425 AK291661 BC002715 BC007578	-59704	+	TSC_hg19_v1_chr6_+_35310339 AK122614	-59741	+	TSC_hg19_v1_chr6_+_35420129 AK292522 BC046359 AF265210 NM_021922	50048	+	AK312617 TSC_hg19_v1_chr6_+_35420152	50075	+	NM_007104 TSC_hg19_v1_chr6_+_35436179 AK313181 AB055764 BC070216	66103	+	AK304482|PPARD|5467|peroxisome proliferator-activated receptor delta##L07592|PPARD|5467|peroxisome proliferator-activated receptor delta##AK304878|PPARD|5467|peroxisome proliferator-activated receptor delta##AB099507|PPARD|5467|peroxisome proliferator-activated receptor delta##AK296425|PPARD|5467|peroxisome proliferator-activated receptor delta##AK291661|PPARD|5467|peroxisome proliferator-activated receptor delta##BC002715|PPARD|5467|peroxisome proliferator-activated receptor delta##BC007578|PPARD|5467|peroxisome proliferator-activated receptor delta##AK122614|PPARD|5467|peroxisome proliferator-activated receptor delta##AK292522|FANCE|2178|Fanconi anemia, complementation group E##BC046359|FANCE|2178|Fanconi anemia, complementation group E##AF265210|FANCE|2178|Fanconi anemia, complementation group E##NM_021922|FANCE|2178|Fanconi anemia, complementation group E##AK312617|FANCE|2178|Fanconi anemia, complementation group E##NM_007104|RPL10A|4736|ribosomal protein L10a##AK313181|RPL10A|4736|ribosomal protein L10a##BC070216|RPL10A|4736|ribosomal protein L10a	0.0	
chr7	150710043	150710139	reg1039620.p1	3.748	+	AK292928 AK302686 M93718 AK315213 TSC_hg19_v1_chr7_+_150690869 AK223636 AK225827 M95296 BC069465 HQ257992 AF400594 DQ256129 DQ256130 DQ256131 NM_001160109 NM_001160110 NM_001160111	-19227	+	NM_000603 BC063294 AK300390	-21924	+	TSC_hg19_v1_chr7_-_150675385 DQ525913 NM_000238 NM_172056	-34722	-	BC128587 AK096734 AY515311 NM_173681	11477	-	TSC_hg19_v1_chr7_+_150725538 AK128129 NM_007188 AK094636 AK002018 AK094005 AK222911 AK294344 AK310796 AK314721 BC141814 BC141836 BC151235 AF047690 BC130036 AK024401 BC143080 BC146829	15472	+	BC030282 NM_004769 NM_020321 NM_020322	35513	+	AK292928|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK302686|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M93718|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK315213|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK223636|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK225827|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##M95296|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC069465|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##HQ257992|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AF400594|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256129|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256130|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ256131|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160109|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160110|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_001160111|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##NM_000603|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##BC063294|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##AK300390|NOS3|4846|nitric oxide synthase 3 (endothelial cell)##DQ525913|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_000238|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##NM_172056|KCNH2|3757|potassium voltage-gated channel, subfamily H (eag-related), member 2##BC128587|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AK096734|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##AY515311|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##NM_173681|ATG9B|285973|ATG9 autophagy related 9 homolog B (S. cerevisiae)##NM_007188|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK094636|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK002018|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK094005|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK222911|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK294344|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK310796|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK314721|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC141814|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC141836|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC151235|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AF047690|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##AK024401|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC143080|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC146829|ABCB8|11194|ATP-binding cassette, sub-family B (MDR/TAP), member 8##BC030282|ACCN3|9311|amiloride-sensitive cation channel 3##NM_004769|ACCN3|9311|amiloride-sensitive cation channel 3##NM_020321|ACCN3|9311|amiloride-sensitive cation channel 3##NM_020322|ACCN3|9311|amiloride-sensitive cation channel 3	0.850723	CTCF.p2:5:0.851
chr7	73027372	73027459	reg1033599.p1	3.748	+	TSC_hg19_v1_chr7_-_72993012 NM_012453	-34390	-	TSC_hg19_v1_chr7_-_72992936 BC047354 AL080162	-34453	-	BC006308 TSC_hg19_v1_chr7_-_72992919 AY358518 AK302277	-34491	-	TSC_hg19_v1_chr7_-_73038853 AF245470 AF245471 AF245472 AF245473 AF245474 AB527610 BC012925 AF156603 NM_032951 NM_032952 NM_032953 NM_032954	11455	-	TSC_hg19_v1_chr7_+_73082160 AY081952 BC029730 NM_001077621	54799	+	TSC_hg19_v1_chr7_+_73082320 BC064621	54908	+	NM_012453|TBL2|26608|transducin (beta)-like 2##BC047354|TBL2|26608|transducin (beta)-like 2##AL080162|TBL2|26608|transducin (beta)-like 2##BC006308|TBL2|26608|transducin (beta)-like 2##AY358518|TBL2|26608|transducin (beta)-like 2##AK302277|TBL2|26608|transducin (beta)-like 2##AF245470|MLXIPL|51085|MLX interacting protein-like##AF245471|MLXIPL|51085|MLX interacting protein-like##AF245472|MLXIPL|51085|MLX interacting protein-like##AF245473|MLXIPL|51085|MLX interacting protein-like##AF245474|MLXIPL|51085|MLX interacting protein-like##BC012925|MLXIPL|51085|MLX interacting protein-like##AF156603|MLXIPL|51085|MLX interacting protein-like##NM_032951|MLXIPL|51085|MLX interacting protein-like##NM_032952|MLXIPL|51085|MLX interacting protein-like##NM_032953|MLXIPL|51085|MLX interacting protein-like##NM_032954|MLXIPL|51085|MLX interacting protein-like##AY081952|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##BC029730|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##NM_001077621|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##BC064621|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)	0.899179	CTCF.p2:-2:0.899
chr8	221965	222069	reg1031203.p2	3.748	+	NM_173539 AK093442 AX748129 TSC_hg19_v1_chr8_+_182396 AK313454 NM_001042415 NM_001042416 BC026190	-39675	+	AK127000 TSC_hg19_v1_chr8_-_182246 BC064938 BC052779	-39745	-	NM_001005504	-104994	-	AF419858 NM_012173 NM_183420 NM_183421 TSC_hg19_v1_chr8_+_356923	134848	+	TSC_hg19_v1_chr8_+_356957 BC050393	134967	+	TSC_hg19_v1_chr8_-_494835 AY194292 FJ381685 BC136248 BC136249	272898	-	NM_173539|ZNF596|169270|zinc finger protein 596##AK313454|ZNF596|169270|zinc finger protein 596##NM_001042415|ZNF596|169270|zinc finger protein 596##NM_001042416|ZNF596|169270|zinc finger protein 596##BC026190|ZNF596|169270|zinc finger protein 596##AK127000|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC064938|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##BC052779|RPL23AP53|644128|ribosomal protein L23a pseudogene 53##NM_001005504|OR4F21|441308|olfactory receptor, family 4, subfamily F, member 21##AF419858|FBXO25|26260|F-box protein 25##NM_012173|FBXO25|26260|F-box protein 25##NM_183420|FBXO25|26260|F-box protein 25##NM_183421|FBXO25|26260|F-box protein 25##BC050393|FBXO25|26260|F-box protein 25##AY194292|C8orf42|157695|chromosome 8 open reading frame 42##BC136248|C8orf42|157695|chromosome 8 open reading frame 42##BC136249|C8orf42|157695|chromosome 8 open reading frame 42	0.0	
chr11	117685801	117685867	reg1034513.p1	3.747	+	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	-17875	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	-17981	-	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-487003	+	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	9600	-	BT006721 BC005302 NM_021603	12932	-	AL136699 TSC_hg19_v1_chr11_-_117747374 AY358976 BC018652 BC093040 AK311736 AL832811 AK290757	61555	-	AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2##BT006721|FXYD2|486|FXYD domain containing ion transport regulator 2##BC005302|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_021603|FXYD2|486|FXYD domain containing ion transport regulator 2##AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6##AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6	0.0	
chr12	110950539	110950719	reg1001305.p2	3.747	+	AK124109 NM_152442 AK301826 BC037353 AK302512 AY297459 BC068031 BC047645 AK097665	-10554	+	TSC_hg19_v1_chr12_-_110939917 BC015095 AF201946 AF175264 BC000880 AF168716 AF193795 AK129767 BC017964 AB578891 AB618733 AL136614 BC095446 NM_016226 NM_057180 BC032462 AB578892	-10719	-	TSC_hg19_v1_chr12_+_110906672 CR457001 CU676792 DQ891800 DQ894984	-43960	+	TSC_hg19_v1_chr12_-_111020755 AY357944	70164	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	70441	-	AK124744 TSC_hg19_v1_chr12_-_111021124	70497	-	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)##NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)##AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)##BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)##AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)##AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)##BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)##BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)##AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)##BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578891|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB618733|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578892|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##CR457001|C12orf24|29902|chromosome 12 open reading frame 24##DQ891800|C12orf24|29902|chromosome 12 open reading frame 24##DQ894984|C12orf24|29902|chromosome 12 open reading frame 24##AY357944|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)	0.0	
chr12	111012098	111012174	reg1034800.p1	3.747	+	AK124109 NM_152442 AK301826 BC037353 AK302512 AY297459 BC068031 BC047645 AK097665	-72061	+	TSC_hg19_v1_chr12_-_110939917 BC015095 AF201946 AF175264 BC000880 AF168716 AF193795 AK129767 BC017964 AB578891 AB618733 AL136614 BC095446 NM_016226 NM_057180 BC032462 AB578892	-72226	-	TSC_hg19_v1_chr12_+_110906672 CR457001 CU676792 DQ891800 DQ894984	-105467	+	TSC_hg19_v1_chr12_-_111020755 AY357944	8657	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	8934	-	AK124744 TSC_hg19_v1_chr12_-_111021124	8990	-	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)##NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)##AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)##BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)##AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)##AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)##BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)##BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)##AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)##BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578891|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB618733|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578892|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##CR457001|C12orf24|29902|chromosome 12 open reading frame 24##DQ891800|C12orf24|29902|chromosome 12 open reading frame 24##DQ894984|C12orf24|29902|chromosome 12 open reading frame 24##AY357944|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)	0.0	
chr14	23926213	23926353	reg1046261.p1	3.747	+	M58018 TSC_hg19_v1_chr14_-_23904870 AK307590 EU747717 NM_000257	-21424	-	TSC_hg19_v1_chr14_-_23877483 AK309494 NM_002471 X56181	-48800	-	TSC_hg19_v1_chr14_+_23845933 AF479262 NM_001037288 NM_138460	-80309	+	TSC_hg19_v1_chr14_+_23938899 NM_001042635 NM_015514 AK124318	12608	+	TSC_hg19_v1_chr14_+_23938911 AK291875 AL050003 BC030817 AK022215 CU689028 EU832521 EU832603	12630	+	BC131533 TSC_hg19_v1_chr14_-_24020861 AB028979 NM_033400	94537	-	M58018|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##AK307590|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##EU747717|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##NM_000257|MYH7|4625|myosin, heavy chain 7, cardiac muscle, beta##AK309494|MYH6|4624|myosin, heavy chain 6, cardiac muscle, alpha##NM_002471|MYH6|4624|myosin, heavy chain 6, cardiac muscle, alpha##X56181|MYH6|4624|myosin, heavy chain 6, cardiac muscle, alpha##AF479262|CMTM5|116173|CKLF-like MARVEL transmembrane domain containing 5##NM_001037288|CMTM5|116173|CKLF-like MARVEL transmembrane domain containing 5##NM_138460|CMTM5|116173|CKLF-like MARVEL transmembrane domain containing 5##NM_001042635|NGDN|25983|neuroguidin, EIF4E binding protein##NM_015514|NGDN|25983|neuroguidin, EIF4E binding protein##AK124318|NGDN|25983|neuroguidin, EIF4E binding protein##AK291875|NGDN|25983|neuroguidin, EIF4E binding protein##AL050003|NGDN|25983|neuroguidin, EIF4E binding protein##BC030817|NGDN|25983|neuroguidin, EIF4E binding protein##AK022215|NGDN|25983|neuroguidin, EIF4E binding protein##EU832521|NGDN|25983|neuroguidin, EIF4E binding protein##EU832603|NGDN|25983|neuroguidin, EIF4E binding protein##BC131533|ZFHX2|85446|zinc finger homeobox 2##AB028979|ZFHX2|85446|zinc finger homeobox 2##NM_033400|ZFHX2|85446|zinc finger homeobox 2	0.160302	
chr20	47463335	47463515	reg1028876.p1	3.747	+	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	-18986	-	AB037836 TSC_hg19_v1_chr20_-_47444291	-19139	-	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-1048107	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	74893	+	TSC_hg19_v1_chr20_+_47662853 BC108309 NM_001316 AF053641 U33286 AK312306 AK307965 AK297270 AK297314 AK298477 AK300589 BC109313 BC109314	199401	+	TSC_hg19_v1_chr20_+_47662875 AF053640	199463	+	AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC108309|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##NM_001316|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053641|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##U33286|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK312306|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK307965|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297270|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK298477|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK300589|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109313|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053640|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)	0.0	
chr20	52508120	52508290	reg1043039.p1	3.747	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-297406	-	AF041259 NM_006526	-308570	-	AK302570 NM_001193421	-706384	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	178857	-	AK315220 NM_003657	179098	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	282315	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr21	45275091	45275206	reg1031863.p2	3.747	+	TSC_hg19_v1_chr21_+_45209457 AK223185 AK303000 AK223215 AK313116 BC000380 U79775 CU674182 DQ891391 DQ894567 BC014787	-65663	+	TSC_hg19_v1_chr21_+_45209429 NM_003683	-65733	+	TSC_hg19_v1_chr21_-_45196227 BC010532 L03558 NM_000100	-78919	-	TSC_hg19_v1_chr21_+_45285029 AY358704	9912	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	9975	+	AK300562 NM_001037553	70130	+	AK223185|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK303000|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK223215|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK313116|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC000380|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##U79775|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ891391|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ894567|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC014787|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##NM_003683|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC010532|CSTB|1476|cystatin B (stefin B)##L03558|CSTB|1476|cystatin B (stefin B)##NM_000100|CSTB|1476|cystatin B (stefin B)##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3	0.0	
chr2	235199322	235199503	reg1032327.p2	3.747	+	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-240025	+	AY090109 NM_024080 BC126342 BC143819	-373367	+	TSC_hg19_v1_chr2_-_234777033 AK301707	-422375	-	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	206307	-	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	661246	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	1203391	+	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##AK301707|MSL3P1|151507|male-specific lethal 3 homolog (Drosophila) pseudogene 1##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.0	
chr3	156922269	156922385	reg1027515.p1	3.747	+	NM_020307 AK122738	-43813	-	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	-44418	-	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-378216	+	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	232323	+	CU691278 AB384625 HQ258524 AL713656 BC101660 BC113555 NM_001167917	290889	-	AK027625 NM_024621	295066	-	NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long##HQ258524|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AL713656|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC101660|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC113555|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167917|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AK027625|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_024621|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)	0.872887	CTCF.p2:-11:0.873
chr4	153457220	153457336	reg1035575.p1	3.747	+	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	-984	-	NM_001013415 AY008274	-153614	-	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	-183382	-	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	155	+	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	143922	-	BC037869 NM_145720	243625	-	BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154##BC037869|TIGD4|201798|tigger transposable element derived 4##NM_145720|TIGD4|201798|tigger transposable element derived 4	0.0	
chr5	176873523	176873703	reg1028261.p2	3.747	+	TSC_hg19_v1_chr5_+_176853676 NM_001004105 NM_001004106 NM_002082 BC009277 L16862 BC017272 AF040751 AF040752 CU677893 CU679285 AB527614	-19855	+	TSC_hg19_v1_chr5_-_176836552 AB095845 NM_000505	-37058	-	M11723 M31315 TSC_hg19_v1_chr5_-_176836522	-37108	-	BC024233 NM_001174101 NM_030567 TSC_hg19_v1_chr5_+_176873814 BC004261	206	+	NM_001174102 BC021240	1716	+	NM_080881	26257	-	NM_001004105|GRK6|2870|G protein-coupled receptor kinase 6##NM_001004106|GRK6|2870|G protein-coupled receptor kinase 6##NM_002082|GRK6|2870|G protein-coupled receptor kinase 6##BC009277|GRK6|2870|G protein-coupled receptor kinase 6##L16862|GRK6|2870|G protein-coupled receptor kinase 6##BC017272|GRK6|2870|G protein-coupled receptor kinase 6##AF040751|GRK6|2870|G protein-coupled receptor kinase 6##AF040752|GRK6|2870|G protein-coupled receptor kinase 6##AB095845|F12|2161|coagulation factor XII (Hageman factor)##NM_000505|F12|2161|coagulation factor XII (Hageman factor)##M11723|F12|2161|coagulation factor XII (Hageman factor)##M31315|F12|2161|coagulation factor XII (Hageman factor)##BC024233|PRR7|80758|proline rich 7 (synaptic)##NM_001174101|PRR7|80758|proline rich 7 (synaptic)##NM_030567|PRR7|80758|proline rich 7 (synaptic)##BC004261|PRR7|80758|proline rich 7 (synaptic)##NM_001174102|PRR7|80758|proline rich 7 (synaptic)##BC021240|PRR7|80758|proline rich 7 (synaptic)##NM_080881|DBN1|1627|drebrin 1	0.0	
chr6	34641539	34641719	reg1027548.p1	3.747	+	AB031549 BC021299 AF071538 AK301543 NM_001252294 NM_012391	-117533	-	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	-158975	+	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	-207725	+	TSC_hg19_v1_chr6_-_34664565 AK313410 BC002328 BC010184 AK056964 BC075810	22917	-	TSC_hg19_v1_chr6_-_34664631 NM_022758 NM_024294	22997	-	NM_003093	83241	+	AB031549|SPDEF|25803|SAM pointed domain containing ets transcription factor##BC021299|SPDEF|25803|SAM pointed domain containing ets transcription factor##AF071538|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK301543|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_001252294|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_012391|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK313410|C6orf106|64771|chromosome 6 open reading frame 106##BC002328|C6orf106|64771|chromosome 6 open reading frame 106##BC010184|C6orf106|64771|chromosome 6 open reading frame 106##AK056964|C6orf106|64771|chromosome 6 open reading frame 106##BC075810|C6orf106|64771|chromosome 6 open reading frame 106##NM_022758|C6orf106|64771|chromosome 6 open reading frame 106##NM_024294|C6orf106|64771|chromosome 6 open reading frame 106##NM_003093|SNRPC|6631|small nuclear ribonucleoprotein polypeptide C	0.0	
chr8	68926784	68926891	reg1035917.p1	3.747	+	AK294299 TSC_hg19_v1_chr8_+_68864738	-62107	+	TSC_hg19_v1_chr8_+_68864614 AY570973	-62204	+	TSC_hg19_v1_chr8_+_68864598 AY508996 AY508997 NM_024870 NM_025170	-62242	+	BC041961 NM_001195639 NM_052958	316119	+	AK095341 NM_001128204 NM_015170 TSC_hg19_v1_chr8_+_70378858 AF545571	1452028	+	TSC_hg19_v1_chr8_+_70379077 AK307951	1452243	+	AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY508996|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY508997|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##NM_024870|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##NM_025170|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##BC041961|C8orf34|116328|chromosome 8 open reading frame 34##NM_001195639|C8orf34|116328|chromosome 8 open reading frame 34##NM_052958|C8orf34|116328|chromosome 8 open reading frame 34##AK095341|SULF1|23213|sulfatase 1##NM_001128204|SULF1|23213|sulfatase 1##NM_015170|SULF1|23213|sulfatase 1##AF545571|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1	0.0	
chr8	8247577	8247661	reg1039132.p1	3.747	+	AK122582 NM_001080826	-8397	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-71731	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-161477	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	312079	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	503319	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	612746	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.0	
chr1	224033854	224033948	reg1033037.p1	3.746	+	NM_001031685 NM_005426 TSC_hg19_v1_chr1_-_224033682	-207	-	TSC_hg19_v1_chr1_-_224033620 BC046150 AJ318888 U58334 BC058918	-278	-	AB384887 TSC_hg19_v1_chr1_-_224033497 AK294432	-438	-	NM_001136115 NM_015176 TSC_hg19_v1_chr1_+_224301812 AK001628 AK307892 BC031576 AK303381 CU689186	267909	+	TSC_hg19_v1_chr1_+_224370925 BC000961 NM_003676	337021	+	TSC_hg19_v1_chr1_+_224370941 AK308232 AF466375 AY423730 AF002668 CU674476	337086	+	NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2##BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2##AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2##U58334|TP53BP2|7159|tumor protein p53 binding protein, 2##BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2##AK294432|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_001136115|FBXO28|23219|F-box protein 28##NM_015176|FBXO28|23219|F-box protein 28##AK001628|FBXO28|23219|F-box protein 28##AK307892|FBXO28|23219|F-box protein 28##BC031576|FBXO28|23219|F-box protein 28##AK303381|FBXO28|23219|F-box protein 28##BC000961|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_003676|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AK308232|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF466375|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AY423730|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF002668|DEGS1|8560|delta(4)-desaturase, sphingolipid 1	0.021164	
chr13	100072936	100073116	reg1021873.p2	3.746	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-113328	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-162412	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-219907	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	80674	+	TSC_hg19_v1_chr13_+_100153777 BC130293	80756	+	BC041830 TSC_hg19_v1_chr13_+_100229390	156351	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.0	
chr17	30007342	30007465	reg1033063.p1	3.746	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-192342	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-288539	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-288736	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	178868	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	221263	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	221328	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.0	
chr2	200716095	200716237	reg1033484.p1	3.746	+	BC039445 TSC_hg19_v1_chr2_-_200715916	-253	-	AB568489 TSC_hg19_v1_chr2_-_200715872	-303	-	AK291463 NM_015265	-380178	-	TSC_hg19_v1_chr2_+_200775981 NM_153689	59811	+	TSC_hg19_v1_chr2_+_200776015 AK096292	59848	+	TSC_hg19_v1_chr2_+_200776033 BC036456 AK303210	59870	+	BC039445|FONG|348751|uncharacterized LOC348751##AB568489|FONG|348751|uncharacterized LOC348751##AK291463|SATB2|23314|SATB homeobox 2##NM_015265|SATB2|23314|SATB homeobox 2##NM_153689|C2orf69|205327|chromosome 2 open reading frame 69##AK096292|C2orf69|205327|chromosome 2 open reading frame 69##BC036456|C2orf69|205327|chromosome 2 open reading frame 69	0.472196	CTCF.p2:-4:0.472
chr22	18841748	18841928	reg1007683.p1	3.746	+	TSC_hg19_v1_chr22_+_18632936 AK313385 AL136690 BC014896	-208936	+	TSC_hg19_v1_chr22_+_18632731 NM_017414	-209104	+	TSC_hg19_v1_chr22_+_18593574 AJ245922 CR456600 BC104845 BC074827 AK315316	-248255	+	NM_005675 AF228707 TSC_hg19_v1_chr22_+_18893832 AK315115 BC047039 CR456434 AK098780 AB528122 CU012994 CU013282	51972	+	AB209472 TSC_hg19_v1_chr22_-_18923807 BC068260 BC094736 BC036534	81893	-	BC118597 BC121809 NM_001195226 NM_016335 U79754	82176	-	AK313385|USP18|11274|ubiquitin specific peptidase 18##AL136690|USP18|11274|ubiquitin specific peptidase 18##BC014896|USP18|11274|ubiquitin specific peptidase 18##NM_017414|USP18|11274|ubiquitin specific peptidase 18##AJ245922|TUBA8|51807|tubulin, alpha 8##CR456600|TUBA8|51807|tubulin, alpha 8##BC104845|TUBA8|51807|tubulin, alpha 8##BC074827|TUBA8|51807|tubulin, alpha 8##AK315316|TUBA8|51807|tubulin, alpha 8##NM_005675|DGCR6|8214|DiGeorge syndrome critical region gene 6##AF228707|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK315115|DGCR6|8214|DiGeorge syndrome critical region gene 6##BC047039|DGCR6|8214|DiGeorge syndrome critical region gene 6##CR456434|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK098780|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU012994|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU013282|DGCR6|8214|DiGeorge syndrome critical region gene 6##AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1##BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1##BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1##BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1##BC118597|PRODH|5625|proline dehydrogenase (oxidase) 1##BC121809|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_001195226|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_016335|PRODH|5625|proline dehydrogenase (oxidase) 1##U79754|PRODH|5625|proline dehydrogenase (oxidase) 1	0.0	
chr22	36780917	36781053	reg1039387.p1	3.746	+	D11393 TSC_hg19_v1_chr22_-_36697021	-83971	-	BC011915 TSC_hg19_v1_chr22_-_36681760	-99222	-	TSC_hg19_v1_chr22_+_36649178 AF305224 AK303919 AK313752 AK298053 BC113867 BC114475 BC127186 BC143038 BC143039 BC017331 AK296099	-131796	+	TSC_hg19_v1_chr22_-_36783906 AB290175 CR456526	2901	-	TSC_hg19_v1_chr22_-_36783943 M81105	2967	-	AK131080 TSC_hg19_v1_chr22_-_36783982 BC049849	2994	-	D11393|MYH9|4627|myosin, heavy chain 9, non-muscle##BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle##AF305224|APOL1|8542|apolipoprotein L, 1##AK303919|APOL1|8542|apolipoprotein L, 1##AK313752|APOL1|8542|apolipoprotein L, 1##AK298053|APOL1|8542|apolipoprotein L, 1##BC113867|APOL1|8542|apolipoprotein L, 1##BC114475|APOL1|8542|apolipoprotein L, 1##BC127186|APOL1|8542|apolipoprotein L, 1##BC143038|APOL1|8542|apolipoprotein L, 1##BC143039|APOL1|8542|apolipoprotein L, 1##BC017331|APOL1|8542|apolipoprotein L, 1##AK296099|APOL1|8542|apolipoprotein L, 1##AB290175|MYH9|4627|myosin, heavy chain 9, non-muscle##CR456526|MYH9|4627|myosin, heavy chain 9, non-muscle##M81105|MYH9|4627|myosin, heavy chain 9, non-muscle##AK131080|MYH9|4627|myosin, heavy chain 9, non-muscle##BC049849|MYH9|4627|myosin, heavy chain 9, non-muscle	0.015793	
chr2	74190983	74191062	reg1030976.p1	3.746	+	TSC_hg19_v1_chr2_+_74154019 X97386	-36976	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-37022	+	TSC_hg19_v1_chr2_+_74153968 NM_080916 NM_080918	-37072	+	NM_144993	82427	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	183996	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	184198	+	X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##NM_080916|DGUOK|1716|deoxyguanosine kinase##NM_080918|DGUOK|1716|deoxyguanosine kinase##NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.0	
chr3	127730177	127730304	reg1033867.p1	3.746	+	NM_207335 AB590042 AM393308 AM393457	-88338	+	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	-95922	+	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	-188098	-	TSC_hg19_v1_chr3_+_127771248 AK027423 AK074706 NM_013336	40947	+	TSC_hg19_v1_chr3_+_127771300 AL832821 BC002951 AF077032 AF084458	41056	+	TSC_hg19_v1_chr3_+_127771307 AF346602	41082	+	NM_207335|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393308|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393457|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK027423|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AK074706|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##NM_013336|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AL832821|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##BC002951|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF077032|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF084458|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)##AF346602|SEC61A1|29927|Sec61 alpha 1 subunit (S. cerevisiae)	0.983423	CTCF.p2:-7:0.983
chr3	189496244	189496310	reg1028301.p1	3.746	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-147018	+	AK125682 NM_198485 BC101550 BC101552	-606466	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-831307	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	11241	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	342418	-	NM_018192	342630	-	BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1	0.0	
chr4	134945549	134945652	reg1037581.p2	3.746	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	-872317	+	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	-875144	+	NM_001099783	-4928319	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	177318	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	3507992	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	3508042	-	AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18	0.162178	
chr4	177045319	177045429	reg1020139.p2	3.746	+	TSC_hg19_v1_chr4_+_176987148 BC118549 BC118627 AK098748 DQ426895 DQ426896	-58205	+	BC146812 NM_170710 NM_181265 AF492460 TSC_hg19_v1_chr4_+_176987137	-58313	+	TSC_hg19_v1_chr4_-_176923575 NM_005277 NM_201592	-121765	-	CU692400 TSC_hg19_v1_chr4_-_177116722 BC021731 BC029428 AY040204 NM_144644	71393	-	AY057053 CU688084 AK096441 BC065710 BX647857 NM_080874	144941	-	TSC_hg19_v1_chr4_+_177241098 NM_021928	195679	+	BC118549|WDR17|116966|WD repeat domain 17##BC118627|WDR17|116966|WD repeat domain 17##AK098748|WDR17|116966|WD repeat domain 17##DQ426895|WDR17|116966|WD repeat domain 17##DQ426896|WDR17|116966|WD repeat domain 17##BC146812|WDR17|116966|WD repeat domain 17##NM_170710|WDR17|116966|WD repeat domain 17##NM_181265|WDR17|116966|WD repeat domain 17##AF492460|WDR17|116966|WD repeat domain 17##NM_005277|GPM6A|2823|glycoprotein M6A##NM_201592|GPM6A|2823|glycoprotein M6A##BC021731|SPATA4|132851|spermatogenesis associated 4##BC029428|SPATA4|132851|spermatogenesis associated 4##AY040204|SPATA4|132851|spermatogenesis associated 4##NM_144644|SPATA4|132851|spermatogenesis associated 4##AY057053|ASB5|140458|ankyrin repeat and SOCS box containing 5##AK096441|ASB5|140458|ankyrin repeat and SOCS box containing 5##BC065710|ASB5|140458|ankyrin repeat and SOCS box containing 5##BX647857|ASB5|140458|ankyrin repeat and SOCS box containing 5##NM_080874|ASB5|140458|ankyrin repeat and SOCS box containing 5##NM_021928|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)	0.0	
chr4	6345697	6345782	reg1035788.p1	3.746	+	TSC_hg19_v1_chr4_+_6271608 AK295986 BC030130 AK312897	-74113	+	Y18064 TSC_hg19_v1_chr4_+_6271588	-74145	+	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	-74171	+	AB590545 AK093115 AX747932 NM_181876	37845	-	BC032954 NM_001206996	77105	-	AF086924 TSC_hg19_v1_chr4_-_6474082	128306	-	AK295986|WFS1|7466|Wolfram syndrome 1 (wolframin)##BC030130|WFS1|7466|Wolfram syndrome 1 (wolframin)##AK312897|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##AK093115|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##NM_181876|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##BC032954|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##NM_001206996|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma##AF086924|PPP2R2C|5522|protein phosphatase 2, regulatory subunit B, gamma	0.775234	CTCF.p2:4:0.775
chr5	5699323	5699407	reg1033197.p1	3.746	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	-276456	+	TSC_hg19_v1_chr5_+_5422777 AK126937	-276590	+	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	-558854	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	679285	-	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	749488	+	TSC_hg19_v1_chr5_+_6449114 AK057805	749824	+	AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1	1.430789	CTCF.p2:35:0.542	CTCF.p2:-39:0.773
chr12	121451627	121451743	reg1035092.p1	3.745	+	HM449088 HM449089 M57732 NM_000545 BC104908 BC104910 BC143483 TSC_hg19_v1_chr12_+_121416562 AB527468 EU446660	-35127	+	TSC_hg19_v1_chr12_+_121416378 X71346 HM116541 HM116542 HM116543 HM116544 HM116545 HM116546 HM116547 HM116548 HM116549 HM116550 HM116551 X71347 HM116552 HM116557 HM116558 HM116559 HM116560 HM116561 HM116562 HM116563 AK298422	-35288	+	TSC_hg19_v1_chr12_-_121342070 AK223590 NM_139015	-109551	-	TSC_hg19_v1_chr12_-_121454230 BC014661	2559	-	TSC_hg19_v1_chr12_-_121454291 AK222630 AK299170 AK301566 AK022510 AK225162 NM_022895 AK307971	2609	-	TSC_hg19_v1_chr12_-_121476781 HQ258301 AJ225089 AK314419 NM_003733 NM_198213 AK023956 BC117408 BC117410	25098	-	HM449088|HNF1A|6927|HNF1 homeobox A##HM449089|HNF1A|6927|HNF1 homeobox A##M57732|HNF1A|6927|HNF1 homeobox A##NM_000545|HNF1A|6927|HNF1 homeobox A##BC104908|HNF1A|6927|HNF1 homeobox A##BC104910|HNF1A|6927|HNF1 homeobox A##BC143483|HNF1A|6927|HNF1 homeobox A##EU446660|HNF1A|6927|HNF1 homeobox A##X71346|HNF1A|6927|HNF1 homeobox A##HM116541|HNF1A|6927|HNF1 homeobox A##HM116542|HNF1A|6927|HNF1 homeobox A##HM116543|HNF1A|6927|HNF1 homeobox A##HM116544|HNF1A|6927|HNF1 homeobox A##HM116545|HNF1A|6927|HNF1 homeobox A##HM116546|HNF1A|6927|HNF1 homeobox A##HM116547|HNF1A|6927|HNF1 homeobox A##HM116548|HNF1A|6927|HNF1 homeobox A##HM116549|HNF1A|6927|HNF1 homeobox A##X71347|HNF1A|6927|HNF1 homeobox A##HM116552|HNF1A|6927|HNF1 homeobox A##HM116557|HNF1A|6927|HNF1 homeobox A##HM116558|HNF1A|6927|HNF1 homeobox A##HM116559|HNF1A|6927|HNF1 homeobox A##HM116560|HNF1A|6927|HNF1 homeobox A##HM116561|HNF1A|6927|HNF1 homeobox A##HM116563|HNF1A|6927|HNF1 homeobox A##AK298422|HNF1A|6927|HNF1 homeobox A##AK223590|SPPL3|121665|signal peptide peptidase-like 3##NM_139015|SPPL3|121665|signal peptide peptidase-like 3##BC014661|C12orf43|64897|chromosome 12 open reading frame 43##AK222630|C12orf43|64897|chromosome 12 open reading frame 43##AK299170|C12orf43|64897|chromosome 12 open reading frame 43##AK301566|C12orf43|64897|chromosome 12 open reading frame 43##AK022510|C12orf43|64897|chromosome 12 open reading frame 43##AK225162|C12orf43|64897|chromosome 12 open reading frame 43##NM_022895|C12orf43|64897|chromosome 12 open reading frame 43##AK307971|C12orf43|64897|chromosome 12 open reading frame 43##HQ258301|OASL|8638|2'-5'-oligoadenylate synthetase-like##AJ225089|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK314419|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_003733|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_198213|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK023956|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117408|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117410|OASL|8638|2'-5'-oligoadenylate synthetase-like	0.024375	
chr12	74806561	74806666	reg1029256.p1	3.745	+	TSC_hg19_v1_chr12_-_72667288 BC040230	-2139343	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	-2140109	+	AK095156 TSC_hg19_v1_chr12_-_72666355	-2140270	-	NM_001136262 TSC_hg19_v1_chr12_+_74931614 AK056642	124972	+	TSC_hg19_v1_chr12_+_74931622 BC009111 AL713650	125026	+	AK054742 TSC_hg19_v1_chr12_+_74933681	127007	+	BC040230|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AK095156|LOC283392|283392|uncharacterized LOC283392##NM_001136262|ATXN7L3B|552889|ataxin 7-like 3B##AK056642|ATXN7L3B|552889|ataxin 7-like 3B##BC009111|ATXN7L3B|552889|ataxin 7-like 3B##AL713650|ATXN7L3B|552889|ataxin 7-like 3B	0.998178	CTCF.p2:-5:0.998
chr14	107108730	107108840	reg1039843.p1	3.745	+	S76904 AM279575 EU619960 JN110911 JN111008 HM774600 HM774602 AF103144 AF103285 AY866748 AY866803 DQ187673 DQ187733 DQ322974 DQ840851 DQ840858 DQ840864 AF006522 AF233250 AF471440 EF177980 EU835549 AB063812 AJ399808 AJ579268 DQ205169 DQ535364 DQ535448 DQ926460 Z98683 Z98702 AJ519260 AJ519262 AJ519304 AY392915 AF062171 TSC_hg19_v1_chr14_-_107099662 AK097355 AK097366 AK093636 AK097572 AX748235	-9262	-	AF460776 EF583680 DQ454729 DQ454436 HM995491 DQ454495 DQ454638 DQ454782 DQ523857 DQ454730 DQ454735 DQ454736 DQ454850 DQ454463 DQ454626 DQ454634 DQ454779 AY003758 DQ454909 AY003782 DQ454387 DQ454439 DQ454443 DQ454491 DQ454630 DQ454640 DQ454657 DQ454658 DQ454693 DQ454996 DQ523865 DQ523866 DQ523904 DQ523907 GU552723 GU552763 DQ454683 DQ454954 AY003756 AY003861 DQ454803 DQ454883 DQ454908 DQ454931 DQ454981 Z30558 Z30559 Z30575 Z30577 Z30579 Z30673 DQ454894 HM995480 DQ454567 DQ454586 DQ454595 DQ454611 DQ454623 DQ454649 DQ454661 DQ454790 DQ454858 DQ454930 DQ454940 DQ523860 M18514 AY003863 AY003854 DQ454390 DQ454444 DQ454650 DQ454684 DQ454709 DQ454717 DQ454721 DQ454733 DQ454737 DQ454855 DQ454887 DQ454933 DQ454936 DQ454963 DQ454984 DQ454994 DQ523863 DQ454447 DQ454504 DQ454539 DQ454596 DQ454609 DQ454613 DQ454619 DQ454633 DQ454656 DQ454672 DQ454720 DQ454886 DQ454942 DQ454972 DQ454977 HM116187 DQ454605 DQ454646 DQ454702 DQ454703 DQ454851 HM116123 HM116135 HM116139 HM116144 HM116147 HM116154 HM116217 AY003860 DQ454602 DQ454880 DQ454822 DQ454825 EF091925 EF175400 EF175422 EF175440 EF583671 EU667610 EU814956 GQ232848 GQ232850 GQ232880 DQ454435 EU099241 EU099155 EU099196 AY577297 AY393172 DQ523932 DQ524057 EU099215 EU099224 AM183980 AY393168 AY393171 AY393176 AY393177 AY393178 AM279541 AF103075 AF103349 AF103054 AY180386 AF103162 FJ385403 JN110682 JN110887 AF103140 FJ385332 FJ385336 FJ385376 FJ385404 FJ385416 FJ385417 FJ385421 GQ504863 L26904 AF103343 AF103091 EU620035 AF103271 EU146313 U00585 EU620063 DQ926547 AY062314 U00553 U00557 AF103164 AF103228 DQ005270 HM995488 AY671631 HM996467 AJ245067 DQ523945 DQ523951 DQ523954 DQ523969 DQ523970 DQ523977 DQ523979 DQ524002 DQ524011 DQ524015 DQ524019 DQ524040 DQ524042 DQ524043 DQ524052 DQ524055 DQ524072 DQ524087 DQ524090 DQ524092 DQ524099 DQ524100 DQ524104 DQ524108 DQ524110 DQ524124 DQ524133 AM233755 DQ926051 DQ926252 AB067262 AJ300799 AY671719 AY941873 AY944692 AY944703 AY944704 AY944722 DQ005289 DQ005293 DQ005305 EF178085 FJ385391 HM995323 HM995324 HM995327 HM995330 HM995345 HM995347 HM995388 HM995403 HM995478 HM995483 HM995484 HM995485 HM995486 HM995487 HM995498 HM995499 HM995500 HM995502 HM995534 HM995551 HM995556 HM995557 HM995559 HM995560 HM995932 HM995933 HM995957 HM995994 HM996010 HM996122 HM996155 HM996464 HM996496 AB063721 AB063723 AB063729 AB063744 AB063787 AB063920 AB066903 AB066912 AB066913 AB067270 AB067272 AB067275 AB067296 AF021963 AF035041 AF062230 AF174018 AF174072 AF174080 AF174097 AF174119 AJ006351 AJ239343 AJ244983 AJ245027 AJ413991 AJ413998 AJ413999 AJ574780 AM279612 AY345917 AY640510 AY670733 AY670744 AY670820 AY670910 AY670915 AY670930 AY670942 AY670967 AY670984 AY671004 AY671056 AY671062 AY671072 AY671075 AY671076 AY671082 AY671085 AY671088 AY671194 AY671221 AY671255 AY671326 AY671337 AY671343 AY671346 AY671353 AY671356 AY671359 AY671373 AY671376 AY671378 AY671394 AY671456 AY671457 AY671458 AY671459 AY671460 AY671463 AY671467 AY671470 AY671472 AY671473 AY671476 AY671485 AY671488 AY671493 AY671494 AY671575 AY671588 AY671589 AY671601 AY671606 AY671628 AY671645 AY671666 AY671667 AY671674 AY671692 AY671710 AY671715 AY671717 AY671759 AY866865 AY986386 AY986387 AY986388 AY986389 AY986390 DQ005263 DQ005287 DQ005288 DQ100795 DQ328873 DQ431484 DQ431485 DQ926085 DQ926130 DQ926178 DQ926219 DQ926256 DQ926258 DQ926290 DQ926310 DQ926368 DQ926395 DQ926514 DQ926572 DQ926640 DQ926644 EU794431 FJ385318 FJ456850 GU570380 GU570382 HQ378396 HQ689744 JF806450 L12189 L12197 L23516 L23517 L23563 S73508 U00486 U00493 U31937 U43927 U51549 U95241 U96283 X98749 Z70613 Z70615 Z70628 Z70629 Z70651 Z70652 Z70653 Z70658 Z74672 Z74674 Z74681 Z74682 Z74683 Z74684 Z74685 Z74686 Z74687 Z74688 Z74689 Z74690 DQ926105 AY686879 AY944715 DQ535399 DQ535425 DQ535434 DQ535441 DQ535468 DQ535469 DQ535474 EF177985 EF178038 EF178125 HM996104 HM996425 HM996431 HM996435 Z14199 Z75403 AY392942 AY393076 AY393081 AY393082 Z47242 AY671167 AF062106 AF062108 AF062109 AF062126 AF062129 AF062132 AF062144 AF062166 AF062185 AF062209 AF062228 AF062252 AF062266 AY671032 AY671186 AY671196 AY671241 AY671258 AY671290 AY671296 M88500 S46247 U44791 U86525 X52111 Z11958 Z47349 Z75395 M18518 BC066594 S50735 TSC_hg19_v1_chr14_-_107083721 AK097365 X67906 X69860 X69866 AK097362 BX248300 AK125079	-25208	-	DQ454429 DQ454922 HM116180 EF091913 EF175413 GQ232868 GQ232976 EF583666 EF407827 EF407822 AJ007320 AF308556 AF103132 HM774392 HQ703981 JN110710 JN111102 HM774550 AY393601 AY393649 AY393679 EU099114 EU099216 DQ100711 AB066834 AF174037 AY050706 DQ005304 FJ492918 HM994925 HQ689790 Z80842 DQ524125 DQ535395 HQ378413 DQ100675 HM996225 AB067078 AY866569 AY971062 DQ065681 DQ926239 EF028212 HM994895 HM994932 HM994933 HM994938 HM994946 HM994963 HM994965 HM995218 HM995258 HM995267 HM995314 HM996512 HM996546 AF021955 GU570262 AF062174 AF062225 AF062279 TSC_hg19_v1_chr14_-_107078867	-30060	-	DQ454926 GU552751 DQ523845 DQ454743 DQ454741 FJ873884 FJ873949 FJ874082 DQ454745 AY003790 EU350425 EU667608 EF407835 DQ454756 DQ454758 DQ322814 AF343367 AF343413 AF103266 AJ007443 AF103288 FJ385341 AF103034 AF103338 AF062236 JN110970 L03820 HM774324 HM774398 HM774726 HM774904 HM774928 L33041 HM775043 AF408742 AF485449 AF078936 AF485451 AF485453 AF485455 EF633815 DQ524036 DQ524153 DQ926062 HM995709 HM995710 HM995711 HM995712 HM995713 HM995863 HM995864 HM995866 DQ322813 HM996268 AJ245306 AY044149 DQ100802 DQ100910 DQ926129 AB063797 AB063898 AB063899 AF022008 AF099199 AF398961 AF471517 AF471518 AF471519 AF471520 AJ224899 AJ399811 AY554175 AY640527 DQ065678 DQ535356 DQ779565 DQ779566 FJ385288 FN563805 FN563806 FN563810 FN563812 FN563827 FN563828 HQ689733 JF806286 X77017 L48239 AY392926 AY393064 AY452138 X65898 X81752 X81753 BC073782 AF067420 TSC_hg19_v1_chr14_-_107114275 AK097071	5324	-	AF103081 JN110643 JN110687 GQ504895 GQ504960 HM774028 HM774358 HM774582 HM774889 X98961 AF165107 AY423163 AF485471 AF485473 AJ306675 AY423172 FN563800 EF633801 HM994977 HM994995 HM995120 HM995247 HM995290 HM995392 HM995519 HM995754 HM995991 HM996039 HM996369 AY866776 DQ322973 DQ926438 AF471404 AJ245345 AJ401162 AM279604 AY866777 DQ100932 DQ100975 DQ926053 DQ926476 GU570357 L19914 Z96976 AB067024 AB067127 AB363182 AB373619 AF231404 AF471217 AF471316 AF471319 AF471331 AF471353 AJ519231 AJ556646 AJ556650 AY640562 AY866705 AY866733 AY971141 DQ065617 DQ065721 DQ100842 DQ535272 DQ535332 DQ926279 EF633803 EF633809 EF633824 EF633825 FJ385293 FJ492933 FN563769 FN563801 FN563814 FN563817 FN563830 FN563831 L38018 Y08405 Y08406 Z96975 Z98724 AJ519258 AJ519228 AJ519314 AJ519323 AJ519243 AJ519280 AJ519310 AJ519335 AJ519268 AJ519313 X62126 TSC_hg19_v1_chr14_-_107122620	13704	-	GQ232991 EU814957 AY003867 GQ233006 AY003724 AY003757 FJ840009 GU552709 AY003791 FJ840366 JF810271 FJ840139 FJ874031 AF017464 HM774748 HM775002 HQ704029 DQ524134 DQ840815 DQ840856 AY530312 AY941926 AY986399 DQ100849 AB067106 AB363089 DQ535377 U00563 U64502 AY392909 AY393069 AY393070 AF062111 AF062168 X81739 X81750 Z14221 TSC_hg19_v1_chr14_-_107131555 AK097017 AK128476 AK130433	22604	-	AK097355|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK097366|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK093636|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097572|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC066594|IGH@|3492|immunoglobulin heavy locus##AK097365|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097362|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125079|IGH@|3492|immunoglobulin heavy locus##BC073782|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF067420|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097017|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK128476|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130433|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.879534	CTCF.p2:22:0.880
chr20	47355572	47355701	reg1034256.p2	3.745	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-940318	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-940884	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1224952	+	AB037836 TSC_hg19_v1_chr20_-_47444291	88650	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	88803	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	182682	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr2	97194114	97194295	reg1024333.p4	3.745	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-192668	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-192728	+	NM_178495 NM_001163524 BC034503	-202256	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	8281	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	109815	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	109863	-	BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_178495|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163524|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC034503|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.028674	
chr3	140974902	140975028	reg1032938.p1	3.745	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	-24279	+	AF403029 BC008324 NM_080862 AK056367	-204208	+	TSC_hg19_v1_chr3_+_140770412 BC051354	-204487	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	68091	+	TSC_hg19_v1_chr3_+_141087345 AK311501	112392	+	AK311479 TSC_hg19_v1_chr3_+_141105293	130323	+	AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38	0.0	
chr3	46997444	46997608	reg1031975.p2	3.745	+	BC110388 NM_001184744 TSC_hg19_v1_chr3_+_46923746	-73784	+	BC112221 BC112247 NM_000316 U17418 X68596	-78277	+	AF174483 CU679491 X07373 M24122 AK312044 BC009790 NM_000258	-92601	-	CU676738 TSC_hg19_v1_chr3_-_47018236 AK096749 AK295532 BC020830 AK303160 NM_144716	20719	-	TSC_hg19_v1_chr3_+_47021155 NM_015175 AK131104 AB384492	23721	+	TSC_hg19_v1_chr3_+_47029479 AK092871 AX747781	31944	+	BC110388|PTH1R|5745|parathyroid hormone 1 receptor##NM_001184744|PTH1R|5745|parathyroid hormone 1 receptor##BC112221|PTH1R|5745|parathyroid hormone 1 receptor##BC112247|PTH1R|5745|parathyroid hormone 1 receptor##NM_000316|PTH1R|5745|parathyroid hormone 1 receptor##U17418|PTH1R|5745|parathyroid hormone 1 receptor##X68596|PTH1R|5745|parathyroid hormone 1 receptor##AF174483|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##X07373|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##M24122|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK312044|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##BC009790|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##NM_000258|MYL3|4634|myosin, light chain 3, alkali; ventricular, skeletal, slow##AK096749|CCDC12|151903|coiled-coil domain containing 12##AK295532|CCDC12|151903|coiled-coil domain containing 12##BC020830|CCDC12|151903|coiled-coil domain containing 12##AK303160|CCDC12|151903|coiled-coil domain containing 12##NM_144716|CCDC12|151903|coiled-coil domain containing 12##NM_015175|NBEAL2|23218|neurobeachin-like 2##AK131104|NBEAL2|23218|neurobeachin-like 2##AK092871|NBEAL2|23218|neurobeachin-like 2	0.0	
chr9	135257617	135257698	reg1034113.p1	3.745	+	TSC_hg19_v1_chr9_-_135230374 BX538166 NM_015046	-27250	-	TSC_hg19_v1_chr9_-_135230352 AK307608 BX537849	-27309	-	TSC_hg19_v1_chr9_-_135230312 AK125448	-27427	-	TSC_hg19_v1_chr9_-_135282210 BC050734 X83973 BC143821 BC127669 BC127670 BC143048 BC143049 BC062692 BC104639 AK225119 AK302902 NM_001205296 NM_007344	24544	-	AK128819 NM_207417 BC118593 BC124555	27955	+	TSC_hg19_v1_chr9_+_135457992 AK054797 NM_020064 BC136956 BC136969 BC144433 AF325688 AB463426 AF321618	200422	+	BX538166|SETX|23064|senataxin##NM_015046|SETX|23064|senataxin##AK307608|SETX|23064|senataxin##BX537849|SETX|23064|senataxin##AK125448|SETX|23064|senataxin##BC050734|TTF1|7270|transcription termination factor, RNA polymerase I##BC143821|TTF1|7270|transcription termination factor, RNA polymerase I##BC127669|TTF1|7270|transcription termination factor, RNA polymerase I##BC127670|TTF1|7270|transcription termination factor, RNA polymerase I##BC143048|TTF1|7270|transcription termination factor, RNA polymerase I##BC143049|TTF1|7270|transcription termination factor, RNA polymerase I##BC062692|TTF1|7270|transcription termination factor, RNA polymerase I##BC104639|TTF1|7270|transcription termination factor, RNA polymerase I##AK225119|TTF1|7270|transcription termination factor, RNA polymerase I##AK302902|TTF1|7270|transcription termination factor, RNA polymerase I##NM_001205296|TTF1|7270|transcription termination factor, RNA polymerase I##NM_007344|TTF1|7270|transcription termination factor, RNA polymerase I##AK128819|C9orf171|389799|chromosome 9 open reading frame 171##NM_207417|C9orf171|389799|chromosome 9 open reading frame 171##BC118593|C9orf171|389799|chromosome 9 open reading frame 171##BC124555|C9orf171|389799|chromosome 9 open reading frame 171##AK054797|BARHL1|56751|BarH-like homeobox 1##NM_020064|BARHL1|56751|BarH-like homeobox 1##BC136956|BARHL1|56751|BarH-like homeobox 1##BC136969|BARHL1|56751|BarH-like homeobox 1##BC144433|BARHL1|56751|BarH-like homeobox 1##AF325688|BARHL1|56751|BarH-like homeobox 1##AF321618|BARHL1|56751|BarH-like homeobox 1	0.0	
chr10	124995747	124995876	reg1039341.p1	3.744	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-81455	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-81865	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-81913	+	AJ505757 NM_153442 BC112011 BC113462	430066	+	BC137492 BC146862 AY358565 NM_198148	655685	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	856088	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.103824	
chr10	15209783	15209964	reg1032913.p1	3.744	+	BC157831 BC171823 TSC_hg19_v1_chr10_-_15197364	-12518	-	TSC_hg19_v1_chr10_+_15139363 AK057006 U77664 BC029494	-70510	+	AK314131 BC029034 NM_153244	-70564	-	BT007024 CU675371 DQ890667 DQ893848 BC006376 AK315085 AK094904 AF043325 TSC_hg19_v1_chr10_-_15210693 NM_004808	788	-	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	203276	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	551920	-	BC157831|LOC100192204|100192204|peptidylprolyl isomerase A (cyclophilin A) pseudogene##AK057006|RPP38|10557|ribonuclease P/MRP 38kDa subunit##U77664|RPP38|10557|ribonuclease P/MRP 38kDa subunit##BC029494|RPP38|10557|ribonuclease P/MRP 38kDa subunit##AK314131|C10orf111|221060|chromosome 10 open reading frame 111##BC029034|C10orf111|221060|chromosome 10 open reading frame 111##NM_153244|C10orf111|221060|chromosome 10 open reading frame 111##BT007024|NMT2|9397|N-myristoyltransferase 2##DQ890667|NMT2|9397|N-myristoyltransferase 2##DQ893848|NMT2|9397|N-myristoyltransferase 2##BC006376|NMT2|9397|N-myristoyltransferase 2##AK315085|NMT2|9397|N-myristoyltransferase 2##AK094904|NMT2|9397|N-myristoyltransferase 2##AF043325|NMT2|9397|N-myristoyltransferase 2##NM_004808|NMT2|9397|N-myristoyltransferase 2##AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8	0.284585	CTCF.p2:46:0.285
chr10	76584691	76584871	reg1035758.p1	3.744	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-648194	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-648251	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-648299	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	1573	+	AY686755 NM_001003892 BC137321 BC137322	233524	-	AB027004 AB103375 NM_016364	274466	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr11	29293746	29293833	reg1035752.p1	3.744	+	TSC_hg19_v1_chr11_+_28131847 BC030997 AK091298 AX746902 AL832668 BC105287	-1161936	+	NM_001113528 NM_152636 TSC_hg19_v1_chr11_+_28129904 BC066900	-1163911	+	TSC_hg19_v1_chr11_-_28129704 BC026090 NM_031217	-1164066	-	M55514 TSC_hg19_v1_chr11_-_30038533 AK311228 NM_002233	744742	-	NM_000510 NM_001018080	958773	+	TSC_hg19_v1_chr11_+_30344653 AK096287 NM_152316 BX647617 BC047775	1050863	+	BC030997|METTL15|196074|methyltransferase like 15##AK091298|METTL15|196074|methyltransferase like 15##AL832668|METTL15|196074|methyltransferase like 15##BC105287|METTL15|196074|methyltransferase like 15##NM_001113528|METTL15|196074|methyltransferase like 15##NM_152636|METTL15|196074|methyltransferase like 15##BC066900|METTL15|196074|methyltransferase like 15##BC026090|KIF18A|81930|kinesin family member 18A##NM_031217|KIF18A|81930|kinesin family member 18A##M55514|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##AK311228|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_002233|KCNA4|3739|potassium voltage-gated channel, shaker-related subfamily, member 4##NM_000510|FSHB|2488|follicle stimulating hormone, beta polypeptide##NM_001018080|FSHB|2488|follicle stimulating hormone, beta polypeptide##AK096287|C11orf46|120534|chromosome 11 open reading frame 46##NM_152316|C11orf46|120534|chromosome 11 open reading frame 46##BX647617|C11orf46|120534|chromosome 11 open reading frame 46##BC047775|C11orf46|120534|chromosome 11 open reading frame 46	0.90823	CTCF.p2:-9:0.908
chr15	79612495	79612605	reg1042317.p1	3.744	+	TSC_hg19_v1_chr15_+_79603557 AJ132270 CR457384	-8983	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	-9047	+	TSC_hg19_v1_chr15_+_79603465 BC111547 BC010853 AK222516 BC022232 AK289434 AK297710 NM_007364 BC017495 AL109672 AY358974 BC000027	-9089	+	AB028947 NM_015206 BC152466	112309	+	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	576830	-	NM_001199758	577076	-	AJ132270|TMED3|23423|transmembrane emp24 protein transport domain containing 3##CR457384|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC111547|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC010853|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK222516|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC022232|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK289434|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK297710|TMED3|23423|transmembrane emp24 protein transport domain containing 3##NM_007364|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC017495|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AL109672|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AY358974|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC000027|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)	0.262623	CTCF.p2:-15:0.263
chr17	38219077	38219143	reg1036044.p2	3.744	+	AK290530 NM_001190919 AB209346	-651	+	NM_001079518 NM_014815	-8222	-	TSC_hg19_v1_chr17_-_38210662 EU392536 EU392541 D50920 AK022508 AK303502 AK303745 AK291040 AK293309 AK299864 AK300992	-8466	-	TSC_hg19_v1_chr17_+_38219217 BC035137 NM_001190918 NM_003250 NM_199334 X55005 BC000261 BC002728 M24899 Y00479	63	+	TSC_hg19_v1_chr17_+_38230679 J03239 DQ892512 DQ895726 AB307686 AB489181 CR541915 CU674114 HQ692859	11599	+	TSC_hg19_v1_chr17_-_38252967 AY429554	33871	-	AK290530|THRA|7067|thyroid hormone receptor, alpha##NM_001190919|THRA|7067|thyroid hormone receptor, alpha##AB209346|THRA|7067|thyroid hormone receptor, alpha##NM_001079518|MED24|9862|mediator complex subunit 24##NM_014815|MED24|9862|mediator complex subunit 24##EU392536|MED24|9862|mediator complex subunit 24##EU392541|MED24|9862|mediator complex subunit 24##D50920|MED24|9862|mediator complex subunit 24##AK022508|MED24|9862|mediator complex subunit 24##AK303502|MED24|9862|mediator complex subunit 24##AK303745|MED24|9862|mediator complex subunit 24##AK291040|MED24|9862|mediator complex subunit 24##AK293309|MED24|9862|mediator complex subunit 24##AK299864|MED24|9862|mediator complex subunit 24##AK300992|MED24|9862|mediator complex subunit 24##BC035137|THRA|7067|thyroid hormone receptor, alpha##NM_001190918|THRA|7067|thyroid hormone receptor, alpha##NM_003250|THRA|7067|thyroid hormone receptor, alpha##NM_199334|THRA|7067|thyroid hormone receptor, alpha##X55005|THRA|7067|thyroid hormone receptor, alpha##BC000261|THRA|7067|thyroid hormone receptor, alpha##BC002728|THRA|7067|thyroid hormone receptor, alpha##M24899|THRA|7067|thyroid hormone receptor, alpha##Y00479|THRA|7067|thyroid hormone receptor, alpha##J03239|THRA|7067|thyroid hormone receptor, alpha##DQ892512|THRA|7067|thyroid hormone receptor, alpha##DQ895726|THRA|7067|thyroid hormone receptor, alpha##AB307686|THRA|7067|thyroid hormone receptor, alpha##CR541915|THRA|7067|thyroid hormone receptor, alpha##HQ692859|THRA|7067|thyroid hormone receptor, alpha##AY429554|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	0.440573	CTCF.p2:-33:0.429
chr20	32320071	32320150	reg1015326.p2	3.744	+	BC132873 BC144188 BC157823 BC146811 BC094738 NM_032819 BC063492 BC040440 AB587355 HQ258664	-314	+	TSC_hg19_v1_chr20_-_32308117 CR533471 CU674580 EU832287 EU832372 BC001147 AK023879 AF072864 AL136648 AK301532 AK316589 AK297018 NM_007238 NM_183397	-12096	-	TSC_hg19_v1_chr20_-_32274190 BC065188 S49592 M96577 BC050369 NM_005225	-45913	-	TSC_hg19_v1_chr20_+_32399127 NM_176812	78976	+	TSC_hg19_v1_chr20_+_32399155 AB100261 BC033859 AY726594 AY329085	79110	+	TSC_hg19_v1_chr20_+_32581531 NM_007367 NM_016732	261369	+	BC132873|ZNF341|84905|zinc finger protein 341##BC144188|ZNF341|84905|zinc finger protein 341##BC157823|ZNF341|84905|zinc finger protein 341##BC146811|ZNF341|84905|zinc finger protein 341##BC094738|ZNF341|84905|zinc finger protein 341##NM_032819|ZNF341|84905|zinc finger protein 341##BC063492|ZNF341|84905|zinc finger protein 341##BC040440|ZNF341|84905|zinc finger protein 341##HQ258664|ZNF341|84905|zinc finger protein 341##CR533471|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##EU832287|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##EU832372|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##BC001147|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK023879|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AF072864|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AL136648|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK301532|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK316589|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK297018|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##NM_007238|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##NM_183397|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##S49592|E2F1|1869|E2F transcription factor 1##M96577|E2F1|1869|E2F transcription factor 1##BC050369|E2F1|1869|E2F transcription factor 1##NM_005225|E2F1|1869|E2F transcription factor 1##NM_176812|CHMP4B|128866|charged multivesicular body protein 4B##AB100261|CHMP4B|128866|charged multivesicular body protein 4B##BC033859|CHMP4B|128866|charged multivesicular body protein 4B##AY726594|CHMP4B|128866|charged multivesicular body protein 4B##AY329085|CHMP4B|128866|charged multivesicular body protein 4B##NM_007367|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##NM_016732|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))	0.0	
chr2	179808625	179808702	reg1035288.p1	3.744	+	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-136560	-	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	-148962	-	TSC_hg19_v1_chr2_+_179387947 AK093733	-420703	+	AL832777 NM_173648	106122	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	320742	-	AK057999 NM_001113398	618651	-	X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##X98114|TTN|7273|titin##X98115|TTN|7273|titin##AK093733|LOC100506866|100506866|uncharacterized LOC100506866##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B	0.0	
chr2	7504180	7504285	reg1035943.p1	3.744	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-446645	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-486369	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-497529	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1317971	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1473487	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1639589	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.968215	CTCF.p2:3:0.968
chr3	48447491	48447557	reg1037083.p2	3.744	+	AY247969 NM_001159927 NM_001159929 NM_207102 BC101303 BC101304 BC101305 BC101306	-33788	+	NM_001080525	-77694	-	DQ892283 DQ895483 AK308970 AF051941 TSC_hg19_v1_chr3_-_48342858 U90449 BC001808 BC012828 NM_005793 AK222555 AK294809 AK307332 AK297364 AK309090	-104673	-	TSC_hg19_v1_chr3_-_48471023 AB007867 BC146793 NM_002673	23356	-	TSC_hg19_v1_chr3_-_48471516 BC066773 NM_001130082 AK296776	23973	-	BC011993 AK022498 NM_024661	33999	-	AY247969|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12##NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12##BC101303|FBXW12|285231|F-box and WD repeat domain containing 12##BC101304|FBXW12|285231|F-box and WD repeat domain containing 12##BC101305|FBXW12|285231|F-box and WD repeat domain containing 12##BC101306|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)##DQ892283|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##DQ895483|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK308970|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AF051941|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##U90449|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC001808|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC012828|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##NM_005793|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK222555|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK294809|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK297364|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AB007867|PLXNB1|5364|plexin B1##BC146793|PLXNB1|5364|plexin B1##NM_002673|PLXNB1|5364|plexin B1##BC066773|PLXNB1|5364|plexin B1##NM_001130082|PLXNB1|5364|plexin B1##AK296776|PLXNB1|5364|plexin B1##BC011993|CCDC51|79714|coiled-coil domain containing 51##AK022498|CCDC51|79714|coiled-coil domain containing 51##NM_024661|CCDC51|79714|coiled-coil domain containing 51	0.039828	
chr4	185018516	185018617	reg1039725.p1	3.744	+	TSC_hg19_v1_chr4_+_184827885 AB384196	-190655	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-190746	+	TSC_hg19_v1_chr4_+_184826513 AB037813 BC146754 NM_020225	-192060	+	BC035035 AY358676 AK057370 NM_153343	120499	-	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	377115	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	552035	-	AK289840|STOX2|56977|storkhead box 2##AB037813|STOX2|56977|storkhead box 2##BC146754|STOX2|56977|storkhead box 2##NM_020225|STOX2|56977|storkhead box 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase	0.316384	CTCF.p2:39:0.316
chr5	55884860	55885041	reg1034845.p2	3.744	+	AK123389 NM_024669	-355765	-	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-594187	-	NM_001242636 NM_001242639	-735801	+	NM_005921	225949	+	TSC_hg19_v1_chr5_+_56111375 AK307828	226414	+	TSC_hg19_v1_chr5_+_56111395 AF042838	226468	+	AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr6	136868611	136868734	reg1031551.p1	3.744	+	AK296483 AK311270 NM_001198614 NM_001198618 TSC_hg19_v1_chr6_-_136847745 AK311114 AK311236 AK316062 NM_001198619 AK311234	-20875	-	AK316529 AK307873 TSC_hg19_v1_chr6_-_136847721	-21002	-	AK295749 AK294461 AK296556 AK311227 NM_001198608 NM_001198609 NM_001198611	-21458	-	TSC_hg19_v1_chr6_-_136871561 AJ242501 AJ242502 CU693064 AB384694 DQ890946 DQ896812 BC025777 AK312789 X73882	2949	-	NM_001198616 NM_001198617 NM_003980	3284	-	TSC_hg19_v1_chr6_-_137113169 AB384845	244558	-	AK296483|MAP7|9053|microtubule-associated protein 7##AK311270|MAP7|9053|microtubule-associated protein 7##NM_001198614|MAP7|9053|microtubule-associated protein 7##NM_001198618|MAP7|9053|microtubule-associated protein 7##AK311114|MAP7|9053|microtubule-associated protein 7##AK311236|MAP7|9053|microtubule-associated protein 7##AK316062|MAP7|9053|microtubule-associated protein 7##NM_001198619|MAP7|9053|microtubule-associated protein 7##AK311234|MAP7|9053|microtubule-associated protein 7##AK316529|MAP7|9053|microtubule-associated protein 7##AK307873|MAP7|9053|microtubule-associated protein 7##AK295749|MAP7|9053|microtubule-associated protein 7##AK294461|MAP7|9053|microtubule-associated protein 7##AK296556|MAP7|9053|microtubule-associated protein 7##AK311227|MAP7|9053|microtubule-associated protein 7##NM_001198608|MAP7|9053|microtubule-associated protein 7##NM_001198609|MAP7|9053|microtubule-associated protein 7##NM_001198611|MAP7|9053|microtubule-associated protein 7##AJ242501|MAP7|9053|microtubule-associated protein 7##AJ242502|MAP7|9053|microtubule-associated protein 7##DQ890946|MAP7|9053|microtubule-associated protein 7##DQ896812|MAP7|9053|microtubule-associated protein 7##BC025777|MAP7|9053|microtubule-associated protein 7##AK312789|MAP7|9053|microtubule-associated protein 7##X73882|MAP7|9053|microtubule-associated protein 7##NM_001198616|MAP7|9053|microtubule-associated protein 7##NM_001198617|MAP7|9053|microtubule-associated protein 7##NM_003980|MAP7|9053|microtubule-associated protein 7	0.021615	
chr6	87987003	87987098	reg1033883.p1	3.744	+	BC063594 AY684300 TSC_hg19_v1_chr6_+_87969709	-17386	+	BC016386 TSC_hg19_v1_chr6_+_87967437	-19615	+	TSC_hg19_v1_chr6_+_87964930 AL832366	-22070	+	TSC_hg19_v1_chr6_+_88032305 NM_001042493 NM_020425 BC070260 BC032824 AK311963	45261	+	BC057813 NM_198568	51945	-	NM_001010868	67520	+	BC063594|ZNF292|23036|zinc finger protein 292##AY684300|ZNF292|23036|zinc finger protein 292##BC016386|ZNF292|23036|zinc finger protein 292##AL832366|ZNF292|23036|zinc finger protein 292##NM_001042493|C6orf162|57150|chromosome 6 open reading frame 162##NM_020425|C6orf162|57150|chromosome 6 open reading frame 162##BC070260|C6orf162|57150|chromosome 6 open reading frame 162##AK311963|C6orf162|57150|chromosome 6 open reading frame 162##BC057813|GJB7|375519|gap junction protein, beta 7, 25kDa##NM_198568|GJB7|375519|gap junction protein, beta 7, 25kDa##NM_001010868|C6orf163|206412|chromosome 6 open reading frame 163	0.941853	CTCF.p2:0:0.942
chr7	97252645	97252825	reg1039458.p1	3.744	+	TSC_hg19_v1_chr7_+_96747012 BC022858 AF201933 BC020621	-505705	+	BC028409 NM_020186	-506831	+	BC006226 TSC_hg19_v1_chr7_-_96654144 AK023493 NM_005221 AK297614	-598541	-	NM_003182 NM_013996 NM_013997 NM_013998 U37529 AK222957 BC018047 X54469	108617	+	AK302242 AK000379 NM_001178077 NM_133436	248715	-	BC008723 TSC_hg19_v1_chr7_-_97501721 BC014621	248969	-	BC022858|ACN9|57001|ACN9 homolog (S. cerevisiae)##AF201933|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC020621|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC006226|DLX5|1749|distal-less homeobox 5##AK023493|DLX5|1749|distal-less homeobox 5##NM_005221|DLX5|1749|distal-less homeobox 5##AK297614|DLX5|1749|distal-less homeobox 5##NM_003182|TAC1|6863|tachykinin, precursor 1##NM_013996|TAC1|6863|tachykinin, precursor 1##NM_013997|TAC1|6863|tachykinin, precursor 1##NM_013998|TAC1|6863|tachykinin, precursor 1##U37529|TAC1|6863|tachykinin, precursor 1##AK222957|TAC1|6863|tachykinin, precursor 1##BC018047|TAC1|6863|tachykinin, precursor 1##X54469|TAC1|6863|tachykinin, precursor 1##AK302242|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK000379|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178077|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_133436|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC008723|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC014621|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)	0.0	
chr8	142140099	142140199	reg1033659.p2	3.744	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-1412	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-128893	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-494525	-	AK128212 NM_001080431	98523	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	124041	-	NM_005293	237215	-	NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.0	
chr11	109843273	109843397	reg1034577.p1	3.743	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-550436	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-550492	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-1307521	+	AK095101 TSC_hg19_v1_chr11_+_109963524	120193	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	120795	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	323978	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.0	
chr12	104688106	104688205	reg1040046.p1	3.743	+	AK128515 TSC_hg19_v1_chr12_+_104682642 AY344670 AY344671 AY344672 AY344680 AY344094 AY344096 AY344095 AY344678 AF077367 AY344679	-5543	+	D88687 TSC_hg19_v1_chr12_+_104681047 AK295067	-7069	+	TSC_hg19_v1_chr12_+_104680950 AY344078	-7194	+	TSC_hg19_v1_chr12_+_104697516 NM_001008394 AK098698 BC027612	9373	+	TSC_hg19_v1_chr12_+_104850745 NM_001173982 NM_018413 AK313217	162539	+	AK290923 TSC_hg19_v1_chr12_+_104850752	162596	+	AK128515|TXNRD1|7296|thioredoxin reductase 1##AY344670|TXNRD1|7296|thioredoxin reductase 1##AY344096|TXNRD1|7296|thioredoxin reductase 1##AY344095|TXNRD1|7296|thioredoxin reductase 1##AF077367|TXNRD1|7296|thioredoxin reductase 1##AY344679|TXNRD1|7296|thioredoxin reductase 1##D88687|TXNRD1|7296|thioredoxin reductase 1##AK295067|TXNRD1|7296|thioredoxin reductase 1##NM_001008394|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK098698|EID3|493861|EP300 interacting inhibitor of differentiation 3##BC027612|EID3|493861|EP300 interacting inhibitor of differentiation 3##NM_001173982|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##NM_018413|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK313217|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK290923|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	0.087661	
chr12	42693851	42693980	reg1032851.p2	3.743	+	NM_001190979 NM_001190980 NM_005748 TSC_hg19_v1_chr12_-_42632167	-61744	-	CU691510 EU446625 EU446756 AB527838 TSC_hg19_v1_chr12_-_42632024 BC037777 AK127531 AK291355 AK296191 AK294260 NM_001190977	-61880	-	TSC_hg19_v1_chr12_-_42538503 AK125141 NM_001099650 NM_173601 BC030023	-155336	-	AK308244 TSC_hg19_v1_chr12_-_42719921 BC005099 BC010177 BC022543 AB062361 NM_033114	25960	-	AK129910 AK303612 NM_001143787 NM_001143788 NM_001143789 NM_016488 NM_201438 NM_201439 NM_201440 NM_201515 TSC_hg19_v1_chr12_+_42719974 AY157850 AK055690 AK056622 AK299951 AY039238 AK303680 AF151066 AK308022 AK299682 BC015322 BC025306 BC039832 BC040449 AF151040 BC033753	26063	+	TSC_hg19_v1_chr12_-_42877418 AK122877 NM_001144881	183501	-	NM_001190979|YAF2|10138|YY1 associated factor 2##NM_001190980|YAF2|10138|YY1 associated factor 2##NM_005748|YAF2|10138|YY1 associated factor 2##EU446625|YAF2|10138|YY1 associated factor 2##EU446756|YAF2|10138|YY1 associated factor 2##BC037777|YAF2|10138|YY1 associated factor 2##AK127531|YAF2|10138|YY1 associated factor 2##AK291355|YAF2|10138|YY1 associated factor 2##AK296191|YAF2|10138|YY1 associated factor 2##AK294260|YAF2|10138|YY1 associated factor 2##NM_001190977|YAF2|10138|YY1 associated factor 2##AK125141|GXYLT1|283464|glucoside xylosyltransferase 1##NM_001099650|GXYLT1|283464|glucoside xylosyltransferase 1##NM_173601|GXYLT1|283464|glucoside xylosyltransferase 1##BC030023|GXYLT1|283464|glucoside xylosyltransferase 1##AK308244|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC005099|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC010177|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##BC022543|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##AB062361|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##NM_033114|ZCRB1|85437|zinc finger CCHC-type and RNA binding motif 1##AK129910|PPHLN1|51535|periphilin 1##AK303612|PPHLN1|51535|periphilin 1##NM_001143787|PPHLN1|51535|periphilin 1##NM_001143788|PPHLN1|51535|periphilin 1##NM_001143789|PPHLN1|51535|periphilin 1##NM_016488|PPHLN1|51535|periphilin 1##NM_201438|PPHLN1|51535|periphilin 1##NM_201439|PPHLN1|51535|periphilin 1##NM_201440|PPHLN1|51535|periphilin 1##NM_201515|PPHLN1|51535|periphilin 1##AY157850|PPHLN1|51535|periphilin 1##AK055690|PPHLN1|51535|periphilin 1##AK056622|PPHLN1|51535|periphilin 1##AK299951|PPHLN1|51535|periphilin 1##AY039238|PPHLN1|51535|periphilin 1##AK303680|PPHLN1|51535|periphilin 1##AF151066|PPHLN1|51535|periphilin 1##AK308022|PPHLN1|51535|periphilin 1##BC015322|PPHLN1|51535|periphilin 1##BC025306|PPHLN1|51535|periphilin 1##BC039832|PPHLN1|51535|periphilin 1##BC040449|PPHLN1|51535|periphilin 1##AF151040|PPHLN1|51535|periphilin 1##AK122877|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144881|PRICKLE1|144165|prickle homolog 1 (Drosophila)	0.0	
chr1	39025047	39025227	reg1039080.p1	3.743	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-512688	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-546707	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-546752	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	300249	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	313879	-	AK312811 BC051675 AK123051 NM_030772	322140	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.0	
chr1	40383616	40383734	reg1029625.p2	3.743	+	TSC_hg19_v1_chr1_-_40367563 AK296078 AB527750 BC030694 BC011864 NM_001033081 NM_001033082 NM_005376	-16063	-	TSC_hg19_v1_chr1_-_40349179 AK223478 AK304759 AY303390 BC128155 BC128156 NM_017646 BC107569	-34501	-	AK296453 AK307910 TSC_hg19_v1_chr1_-_40349167	-34508	-	TSC_hg19_v1_chr1_+_40420783 NM_001136493 NM_032793	37110	+	TSC_hg19_v1_chr1_+_40420821 BC011587 AK075183 AK301533 AB073383 AK027396 AK297991 AK093223 AK291540 AX747998 AF289609 AL834184	37143	+	TSC_hg19_v1_chr1_+_40420841 BC092414 BC069694 BC069771 AK074186 CU679972	37225	+	AK296078|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##BC030694|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##BC011864|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##NM_001033081|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##NM_001033082|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##NM_005376|MYCL1|4610|v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)##AK223478|TRIT1|54802|tRNA isopentenyltransferase 1##AK304759|TRIT1|54802|tRNA isopentenyltransferase 1##AY303390|TRIT1|54802|tRNA isopentenyltransferase 1##BC128155|TRIT1|54802|tRNA isopentenyltransferase 1##BC128156|TRIT1|54802|tRNA isopentenyltransferase 1##NM_017646|TRIT1|54802|tRNA isopentenyltransferase 1##BC107569|TRIT1|54802|tRNA isopentenyltransferase 1##AK296453|TRIT1|54802|tRNA isopentenyltransferase 1##AK307910|TRIT1|54802|tRNA isopentenyltransferase 1##NM_001136493|MFSD2A|84879|major facilitator superfamily domain containing 2A##NM_032793|MFSD2A|84879|major facilitator superfamily domain containing 2A##BC011587|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK075183|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK301533|MFSD2A|84879|major facilitator superfamily domain containing 2A##AB073383|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK027396|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK297991|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK093223|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK291540|MFSD2A|84879|major facilitator superfamily domain containing 2A##AF289609|MFSD2A|84879|major facilitator superfamily domain containing 2A##AL834184|MFSD2A|84879|major facilitator superfamily domain containing 2A##BC092414|MFSD2A|84879|major facilitator superfamily domain containing 2A##AK074186|MFSD2A|84879|major facilitator superfamily domain containing 2A	0.027746	
chr15	80966636	80966745	reg1037920.p2	3.743	+	AK295763 TSC_hg19_v1_chr15_+_80733623	-233085	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	-269956	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-521314	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	20972	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	21319	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	105031	+	AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199	0.0	
chr16	69601238	69601418	reg1036786.p2	3.743	+	AJ243298 AJ243299 TSC_hg19_v1_chr16_+_69600112 AJ005683 AJ005684	-1147	+	TSC_hg19_v1_chr16_+_69599907 AB020634 BC146765 AF089824 BC089395 BC131509	-1412	+	NM_001113178 NM_006599 NM_138713 NM_138714 NM_173214 NM_173215 TSC_hg19_v1_chr16_+_69599868	-1460	+	AF134870 TSC_hg19_v1_chr16_+_69681070	79686	+	U80231 AK000312 TSC_hg19_v1_chr16_+_69726827	125461	+	TSC_hg19_v1_chr16_-_69760362 AK316246	159032	-	AJ243298|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ243299|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ005683|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ005684|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AB020634|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##BC146765|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AF089824|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##BC089395|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##BC131509|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_001113178|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_006599|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_138713|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_138714|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_173214|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_173215|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AF134870|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##U80231|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AK000312|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AK316246|NQO1|1728|NAD(P)H dehydrogenase, quinone 1	0.245531	CTCF.p2:0:0.246
chr19	40315218	40315325	reg1037556.p1	3.743	+	NM_001143832	-48038	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	-86632	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	-120228	+	TSC_hg19_v1_chr19_-_40324779 AF205861 BC025291 AK074971 BC009688 AK302127 BC018751 NM_004714 NM_006483 NM_006484 Y17999	9527	-	BC019609 BC015218 TSC_hg19_v1_chr19_-_40331308 AB451384 BT006830 BT020144 CR457069	16020	-	AB463635 M59849 TSC_hg19_v1_chr19_-_40336992	21697	-	NM_001143832|LEUTX|342900|leucine twenty homeobox##FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC019609|FBL|2091|fibrillarin##BC015218|FBL|2091|fibrillarin##AB451384|FBL|2091|fibrillarin##BT006830|FBL|2091|fibrillarin##BT020144|FBL|2091|fibrillarin##CR457069|FBL|2091|fibrillarin##M59849|FBL|2091|fibrillarin	0.0	
chr22	38004557	38004675	reg1041067.p2	3.743	+	TSC_hg19_v1_chr22_+_38004480 NM_001001560 NM_001001561 NM_001172687 NM_013365 AK075256	-54	+	M87842 BC059782 NM_006498 CR456512	-28616	-	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	-48143	+	TSC_hg19_v1_chr22_+_38004843 CR456493 BC010917 AK290548 BC029388 AK225157 BC044629 AF190862 AF233521 AF218584	154	+	TSC_hg19_v1_chr22_+_38004869 AB463055 CU013090 CU013378 CU692224	267	+	TSC_hg19_v1_chr22_+_38005047 AK092417 AK122898 AX747533 NM_001172688	421	+	NM_001001560|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001001561|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001172687|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_013365|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK075256|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##M87842|LGALS2|3957|lectin, galactoside-binding, soluble, 2##BC059782|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_006498|LGALS2|3957|lectin, galactoside-binding, soluble, 2##CR456512|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##CR456493|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC010917|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK290548|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC029388|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK225157|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC044629|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF190862|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF233521|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF218584|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CU013090|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CU013378|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK092417|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK122898|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001172688|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1	0.0	
chr5	139050000	139050180	reg1022498.p1	3.743	+	TSC_hg19_v1_chr5_+_139028524 AK001782	-21582	+	TSC_hg19_v1_chr5_+_139028290 AB097005 AB097032 NM_016463	-21923	+	BC024040 BC041013 TSC_hg19_v1_chr5_+_139027968 BC050046 BC017439	-22106	+	BC002490 TSC_hg19_v1_chr5_+_139060088 AB463548 GQ379202 AK314420	9994	+	AF151029 TSC_hg19_v1_chr5_+_139060229	10122	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	10302	+	AK001782|CXXC5|51523|CXXC finger protein 5##AB097005|CXXC5|51523|CXXC finger protein 5##AB097032|CXXC5|51523|CXXC finger protein 5##NM_016463|CXXC5|51523|CXXC finger protein 5##BC024040|CXXC5|51523|CXXC finger protein 5##BC041013|CXXC5|51523|CXXC finger protein 5##BC050046|CXXC5|51523|CXXC finger protein 5##BC017439|CXXC5|51523|CXXC finger protein 5##BC002490|CXXC5|51523|CXXC finger protein 5##GQ379202|CXXC5|51523|CXXC finger protein 5##AK314420|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5	0.0	
chr6	158185593	158185665	reg1027678.p2	3.743	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-383090	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-440412	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-441045	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	58660	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	58745	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	217258	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.841385	CTCF.p2:-36:0.825
chr6_qbl_hap6	1933800	1933914	reg1041135.p1	3.743	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.74031	CTCF.p2:1:0.740
chr7	69204358	69204462	reg1026753.p1	3.743	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-139822	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-140081	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-140574	+	TSC_hg19_v1_chr7_+_70231164 AK296981	1026795	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1393378	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2597368	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.0	
chr7	73686978	73687133	reg1031966.p2	3.743	+	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	-18319	-	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	-18344	-	TSC_hg19_v1_chr7_+_73624361 AF252613	-62701	+	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	16732	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	181109	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	181253	+	NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AF252613|LAT2|7462|linker for activation of T cells family, member 2##AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1	0.0	
chr9	86911408	86911555	reg1032261.p2	3.743	+	NM_024945 TSC_hg19_v1_chr9_+_86595689 BC039999 BC020606 AK022950 BC044571 BC053549 BC032494	-315772	+	TSC_hg19_v1_chr9_-_86595531 BC014980 AK291336 X72727 NM_002140 NM_031262	-315942	-	TSC_hg19_v1_chr9_-_86595168 NM_031263	-316306	-	BC093821 BC093823 AK310861 AK304406 AK314039 AK292849 NM_001199633	44153	-	AF305210 NM_022127	71931	-	TSC_hg19_v1_chr9_+_87283453 BC075804 NM_001018064 NM_006180 AB209118	371980	+	NM_024945|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC039999|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC020606|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##AK022950|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC044571|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC053549|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC032494|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC014980|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##AK291336|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##X72727|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_002140|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_031262|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_031263|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##BC093821|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093823|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK310861|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK304406|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK314039|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK292849|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_001199633|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AF305210|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_022127|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC075804|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018064|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_006180|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB209118|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	0.020692	
chr10	86134955	86135135	reg1011655.p2	3.742	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-3427	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-46651	+	BX641033 NM_001012720 NM_001012722 NM_002921 U14910 BC011349 BC008094 BC042536 CU675929 DQ892074 DQ895267	-130218	+	TSC_hg19_v1_chr10_+_86184685 AK294321	49650	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	1991218	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	2146449	-	AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##BX641033|RGR|5995|retinal G protein coupled receptor##NM_001012720|RGR|5995|retinal G protein coupled receptor##NM_001012722|RGR|5995|retinal G protein coupled receptor##NM_002921|RGR|5995|retinal G protein coupled receptor##U14910|RGR|5995|retinal G protein coupled receptor##BC011349|RGR|5995|retinal G protein coupled receptor##BC008094|RGR|5995|retinal G protein coupled receptor##BC042536|RGR|5995|retinal G protein coupled receptor##DQ892074|RGR|5995|retinal G protein coupled receptor##DQ895267|RGR|5995|retinal G protein coupled receptor##AK294321|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)	0.0	
chr11	61583850	61584031	reg1035545.p1	3.742	+	TSC_hg19_v1_chr11_+_61560405 AK312761	-23536	+	TSC_hg19_v1_chr11_+_61560382 AK301743 BC000323	-23568	+	NM_004111 X76771	-23812	+	CU675827 AF199596 AF226273 DQ890643 DQ893822 AK027427 BC007846 TSC_hg19_v1_chr11_-_61584328 AK222906 AF084558 AL512760 AK314199 AK027522	361	-	AK074754 AK074819 TSC_hg19_v1_chr11_-_61584464 NM_013402	549	-	TSC_hg19_v1_chr11_+_61595676 AF084559 NM_004265	11761	+	AK312761|FEN1|2237|flap structure-specific endonuclease 1##AK301743|FEN1|2237|flap structure-specific endonuclease 1##BC000323|FEN1|2237|flap structure-specific endonuclease 1##NM_004111|FEN1|2237|flap structure-specific endonuclease 1##X76771|FEN1|2237|flap structure-specific endonuclease 1##AF199596|FADS1|3992|fatty acid desaturase 1##AF226273|FADS1|3992|fatty acid desaturase 1##DQ890643|FADS1|3992|fatty acid desaturase 1##DQ893822|FADS1|3992|fatty acid desaturase 1##AK027427|FADS1|3992|fatty acid desaturase 1##BC007846|FADS1|3992|fatty acid desaturase 1##AK222906|FADS1|3992|fatty acid desaturase 1##AF084558|FADS1|3992|fatty acid desaturase 1##AL512760|FADS1|3992|fatty acid desaturase 1##AK314199|FADS1|3992|fatty acid desaturase 1##AK027522|FADS1|3992|fatty acid desaturase 1##AK074754|FADS1|3992|fatty acid desaturase 1##AK074819|FADS1|3992|fatty acid desaturase 1##NM_013402|FADS1|3992|fatty acid desaturase 1##AF084559|FADS2|9415|fatty acid desaturase 2##NM_004265|FADS2|9415|fatty acid desaturase 2	0.149207	
chr12	108728055	108728185	reg1036686.p1	3.742	+	NM_001142345	-13682	-	BC110330 AB018332 NM_014653	-204633	+	AY238895 NM_203436	-559959	+	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	4964	-	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	180962	+	AB385287 D63879 TSC_hg19_v1_chr12_-_108954936 BC103706 BC093784 BC111983 BC143253 BC004547 BC024279 AB020880 AF387506 BC032601	226814	-	NM_001142345|CMKLR1|1240|chemokine-like receptor 1##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing##D63879|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC103706|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC093784|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC111983|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC143253|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC004547|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC024279|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AB020880|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AF387506|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC032601|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3	0.0	
chr1	25273869	25273998	reg1037479.p2	3.742	+	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-17147	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-17194	-	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	-17508	-	BC013362 AK310945 NM_001031680 AF022726	17609	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	285054	-	BC065040 TSC_hg19_v1_chr1_-_25573922	299990	-	AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr13	100258560	100258673	reg1028987.p2	3.742	+	BC041830 TSC_hg19_v1_chr13_+_100229390	-29239	+	TSC_hg19_v1_chr13_+_100153777 BC130293	-104834	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	-104916	+	TSC_hg19_v1_chr13_+_100258943 NM_206808 AK300510 BC034360 AK095506 AF428253 CU689862	304	+	AF378304 NM_033132	365553	-	TSC_hg19_v1_chr13_+_100633453 AK298232	374839	+	BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_206808|CLYBL|171425|citrate lyase beta like##AK300510|CLYBL|171425|citrate lyase beta like##BC034360|CLYBL|171425|citrate lyase beta like##AK095506|CLYBL|171425|citrate lyase beta like##AF428253|CLYBL|171425|citrate lyase beta like##AF378304|ZIC5|85416|Zic family member 5##NM_033132|ZIC5|85416|Zic family member 5	0.0	
chr16	10869098	10869265	reg1022642.p1	3.742	+	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-31477	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-80416	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	-194691	-	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	43367	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	101931	+	BC071683 TSC_hg19_v1_chr16_-_11036171	166985	-	AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)	0.0	
chr16	17200113	17200254	reg1033916.p2	3.742	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-873653	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-873695	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-873701	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	364622	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1373208	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1597913	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr20	52517120	52517188	reg1029575.p2	3.742	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-306355	-	AF041259 NM_006526	-317519	-	AK302570 NM_001193421	-715333	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	169908	-	AK315220 NM_003657	170149	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	273366	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr3	195908864	195909044	reg1036180.p2	3.742	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-99938	-	TSC_hg19_v1_chr3_-_195808984 M11507	-99971	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-99993	-	BC034801 BC022078 NM_001039617 AK122907	29327	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	34440	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	105581	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr5	61636373	61636486	reg1033671.p1	3.742	+	TSC_hg19_v1_chr5_+_61602278 AK297347 AK307880 EF560716 EF560728 EU832810 GQ129246 AK315866	-34159	+	TSC_hg19_v1_chr5_+_61602066 BC047544	-34347	+	TSC_hg19_v1_chr5_+_61601970 NM_001098511 NM_001243952 NM_001243953 NM_004520	-34456	+	AB590206 DQ891482 DQ894669 DQ894841 TSC_hg19_v1_chr5_-_61699710 AF102147 BC010874 AK299480	63229	-	TSC_hg19_v1_chr5_-_61699730 BC002841 BC017885 NM_014473 AK292723	63330	-	TSC_hg19_v1_chr5_+_61708589 NM_016338 AK001696 BC033776	72195	+	AK297347|KIF2A|3796|kinesin heavy chain member 2A##AK307880|KIF2A|3796|kinesin heavy chain member 2A##EF560716|KIF2A|3796|kinesin heavy chain member 2A##EF560728|KIF2A|3796|kinesin heavy chain member 2A##EU832810|KIF2A|3796|kinesin heavy chain member 2A##GQ129246|KIF2A|3796|kinesin heavy chain member 2A##AK315866|KIF2A|3796|kinesin heavy chain member 2A##BC047544|KIF2A|3796|kinesin heavy chain member 2A##NM_001098511|KIF2A|3796|kinesin heavy chain member 2A##NM_001243952|KIF2A|3796|kinesin heavy chain member 2A##NM_001243953|KIF2A|3796|kinesin heavy chain member 2A##NM_004520|KIF2A|3796|kinesin heavy chain member 2A##DQ891482|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##DQ894669|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##DQ894841|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##AF102147|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##BC010874|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##AK299480|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##BC002841|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##BC017885|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##NM_014473|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##AK292723|DIMT1|27292|DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)##NM_016338|IPO11|51194|importin 11##AK001696|IPO11|51194|importin 11##BC033776|IPO11|51194|importin 11	0.576408	CTCF.p2:-8:0.576
chr6	371523	371625	reg1026277.p2	3.742	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-79077	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-79489	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	20190	+	AF508547 BC101697 BC101699 NM_148959	285379	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	321516	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chr9	37211300	37211412	reg1037272.p2	3.742	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-90773	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-90848	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-90870	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	211350	+	BC010007 TSC_hg19_v1_chr9_-_37465267	253904	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	254039	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.0	
chr13	111293736	111293802	reg1043610.p1	3.741	+	TSC_hg19_v1_chr13_-_111268694 AK095260	-25071	-	TSC_hg19_v1_chr13_+_111267898 AK093771 AK298917 AX748297 AK302117 AK057767 AK296758 NM_001242881 NM_018210 AK296227 AK024260 BC041028 AK001631 AK225129	-25727	+	TSC_hg19_v1_chr13_+_111267870 NM_001242882 NM_001242883	-25939	+	TSC_hg19_v1_chr13_-_111358444 AB062436	64669	-	TSC_hg19_v1_chr13_-_111358447 BC007220	64679	-	TSC_hg19_v1_chr13_-_111358460 AK022180 NM_024537	64698	-	AK093771|CARKD|55739|carbohydrate kinase domain containing##AK298917|CARKD|55739|carbohydrate kinase domain containing##AK302117|CARKD|55739|carbohydrate kinase domain containing##AK057767|CARKD|55739|carbohydrate kinase domain containing##AK296758|CARKD|55739|carbohydrate kinase domain containing##NM_001242881|CARKD|55739|carbohydrate kinase domain containing##NM_018210|CARKD|55739|carbohydrate kinase domain containing##AK296227|CARKD|55739|carbohydrate kinase domain containing##AK024260|CARKD|55739|carbohydrate kinase domain containing##BC041028|CARKD|55739|carbohydrate kinase domain containing##AK001631|CARKD|55739|carbohydrate kinase domain containing##AK225129|CARKD|55739|carbohydrate kinase domain containing##NM_001242882|CARKD|55739|carbohydrate kinase domain containing##NM_001242883|CARKD|55739|carbohydrate kinase domain containing##AB062436|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##BC007220|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##AK022180|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##NM_024537|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)	0.0	
chr13	33769404	33769584	reg1029323.p1	3.741	+	AY082590 BC046563 NM_001243466 NM_178007	-9279	-	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-178971	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-608811	+	AL049801 AY082591 AK091804 NM_001243474 NM_052851	10670	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	90373	-	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	155274	-	AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr16	29742062	29742177	reg1041608.p1	3.741	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-51637	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-51725	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-67105	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	15182	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	47467	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	59932	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.0	
chr18	10923755	10923854	reg1035276.p1	3.741	+	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-397707	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-397748	+	TSC_hg19_v1_chr18_+_10526033 AK294038 U78107 AK314495	-397776	+	NM_022068	224956	-	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	765408	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	827711	+	CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK294038|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##U78107|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK314495|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.0	
chr22	18379440	18379560	reg1032576.p2	3.741	+	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-122166	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-122277	-	TSC_hg19_v1_chr22_-_18257211 AK313729 BC033634	-122293	-	TSC_hg19_v1_chr22_-_18484268 AK127487	104728	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	127761	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	181188	+	BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK313729|BID|637|BH3 interacting domain death agonist##BC033634|BID|637|BH3 interacting domain death agonist##AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26	0.021213	
chr22	28333593	28333724	reg1032299.p2	3.741	+	TSC_hg19_v1_chr22_-_28315245 BC018704 D30037 AK313064 CR456541 NM_012399	-18394	-	TSC_hg19_v1_chr22_-_28315203 BC031427	-18451	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	-18484	-	TSC_hg19_v1_chr22_-_29075801 NM_001145418	742135	-	BC004207 AK289360 CR456418 NM_001005735 NM_007194 NM_145862 AK290754 AB164374	804159	-	BC000004 TSC_hg19_v1_chr22_+_29138056 NM_172002 BC065569 CR456462 AY191719 AB528150 CU013013 CU013301	804403	+	BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta##D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta##CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_001145418|TTC28|23331|tetratricopeptide repeat domain 28##BC004207|CHEK2|11200|checkpoint kinase 2##AK289360|CHEK2|11200|checkpoint kinase 2##CR456418|CHEK2|11200|checkpoint kinase 2##NM_001005735|CHEK2|11200|checkpoint kinase 2##NM_007194|CHEK2|11200|checkpoint kinase 2##NM_145862|CHEK2|11200|checkpoint kinase 2##AK290754|CHEK2|11200|checkpoint kinase 2##NM_172002|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##BC065569|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##CR456462|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##AY191719|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)	0.156578	
chr3	111834130	111834290	reg1031848.p1	3.741	+	TSC_hg19_v1_chr3_+_111805267 AK303588 NM_001171747 NM_024616 AY830714 AK026839 BC017064 AK298076	-28982	+	AK131211 NM_001042575 BC117322	-75702	+	NM_001008273 BC004477 TSC_hg19_v1_chr3_+_111718179 AF112201 BT007408 CU677265	-116073	+	CU688884 BC030506 AY212246 AK313368 AK128276 AF521911 NM_001190259 NM_001190260 NM_152785	17849	-	BC044801 NM_183061 AK128084	178878	-	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	217748	+	AK303588|C3orf52|79669|chromosome 3 open reading frame 52##NM_001171747|C3orf52|79669|chromosome 3 open reading frame 52##NM_024616|C3orf52|79669|chromosome 3 open reading frame 52##AY830714|C3orf52|79669|chromosome 3 open reading frame 52##AK026839|C3orf52|79669|chromosome 3 open reading frame 52##BC017064|C3orf52|79669|chromosome 3 open reading frame 52##AK298076|C3orf52|79669|chromosome 3 open reading frame 52##AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7##NM_001008273|TAGLN3|29114|transgelin 3##AF112201|TAGLN3|29114|transgelin 3##BT007408|TAGLN3|29114|transgelin 3##BC030506|GCET2|257144|germinal center expressed transcript 2##AY212246|GCET2|257144|germinal center expressed transcript 2##AK313368|GCET2|257144|germinal center expressed transcript 2##AF521911|GCET2|257144|germinal center expressed transcript 2##NM_001190259|GCET2|257144|germinal center expressed transcript 2##NM_001190260|GCET2|257144|germinal center expressed transcript 2##NM_152785|GCET2|257144|germinal center expressed transcript 2##BC044801|SLC9A10|285335|solute carrier family 9, member 10##NM_183061|SLC9A10|285335|solute carrier family 9, member 10##AK128084|SLC9A10|285335|solute carrier family 9, member 10##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule	0.0	
chr3	122345765	122345897	reg1035662.p2	3.741	+	BC101701 BC101703 BC143573 AK097916 NM_152615	-11339	+	TSC_hg19_v1_chr3_+_122296496 AK309863 NM_001113523 BX647656 DQ063586	-49351	+	AF307338 AF307339 TSC_hg19_v1_chr3_-_122283426 NM_001146103 NM_031458	-62359	-	TSC_hg19_v1_chr3_+_122399703 NM_017554 AK304269	53867	+	CU680100 CU687786 DQ893066 DQ896319 AB590214 AK096705 BC063629 TSC_hg19_v1_chr3_-_122512667 AF400663 BC011897 AK289410 NM_024610	166772	-	TSC_hg19_v1_chr3_+_122513913 NM_032839 AK027690 AK291176 BC039821 BC033738	168085	+	BC101701|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BC101703|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BC143573|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##AK097916|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##NM_152615|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##NM_001113523|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BX647656|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##DQ063586|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##AF307338|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##AF307339|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_001146103|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_031458|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_017554|PARP14|54625|poly (ADP-ribose) polymerase family, member 14##AK304269|PARP14|54625|poly (ADP-ribose) polymerase family, member 14##DQ893066|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##DQ896319|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK096705|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC063629|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AF400663|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC011897|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK289410|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##NM_024610|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##NM_032839|DIRC2|84925|disrupted in renal carcinoma 2##AK027690|DIRC2|84925|disrupted in renal carcinoma 2##AK291176|DIRC2|84925|disrupted in renal carcinoma 2##BC039821|DIRC2|84925|disrupted in renal carcinoma 2##BC033738|DIRC2|84925|disrupted in renal carcinoma 2	0.0	
chr6	113810599	113810713	reg1036632.p1	3.741	+	AK122906 NM_001013734	-1142125	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1234761	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-1234851	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	368078	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	481616	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	481680	-	AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2	0.731754	CTCF.p2:37:0.720
chr7	158766279	158766417	reg1030251.p2	3.741	+	TSC_hg19_v1_chr7_+_158649248 BC014491 NM_018051 CU677023	-117035	+	TSC_hg19_v1_chr7_-_158622236 AB527334 AY368150 NM_020728	-144088	-	TSC_hg19_v1_chr7_-_158622198 AB033054	-144157	-	BT007118 DQ890571 DQ893732 BC010569 AK310386 L36566 U18810 AK308955 NM_003382 X95097	171207	-	None	None	None	None	None	None	BC014491|WDR60|55112|WD repeat domain 60##NM_018051|WDR60|55112|WD repeat domain 60##AY368150|ESYT2|57488|extended synaptotagmin-like protein 2##NM_020728|ESYT2|57488|extended synaptotagmin-like protein 2##AB033054|ESYT2|57488|extended synaptotagmin-like protein 2##BT007118|VIPR2|7434|vasoactive intestinal peptide receptor 2##DQ890571|VIPR2|7434|vasoactive intestinal peptide receptor 2##DQ893732|VIPR2|7434|vasoactive intestinal peptide receptor 2##BC010569|VIPR2|7434|vasoactive intestinal peptide receptor 2##AK310386|VIPR2|7434|vasoactive intestinal peptide receptor 2##L36566|VIPR2|7434|vasoactive intestinal peptide receptor 2##U18810|VIPR2|7434|vasoactive intestinal peptide receptor 2##AK308955|VIPR2|7434|vasoactive intestinal peptide receptor 2##NM_003382|VIPR2|7434|vasoactive intestinal peptide receptor 2##X95097|VIPR2|7434|vasoactive intestinal peptide receptor 2	0.760687	CTCF.p2:11:0.761
chr7	76339149	76339255	reg1036636.p1	3.741	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-82655	-	TSC_hg19_v1_chr7_-_76256148 BC017101	-82999	-	TSC_hg19_v1_chr7_+_76178675 BC078169	-160527	+	BC036053 NM_020879 BX649000 AK292491 HM370402	412744	+	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	489934	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	706516	-	BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC017101|POMZP3|22932|POM121 and ZP3 fusion##BC078169|LOC100133091|100133091|uncharacterized LOC100133091##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)	0.0	
chr8	102178694	102178874	reg1037863.p1	3.741	+	TSC_hg19_v1_chr8_-_101965608 NM_003406	-213161	-	TSC_hg19_v1_chr8_-_101965595 M86400	-213208	-	TSC_hg19_v1_chr8_-_101965198 NM_001135699	-213558	-	BC035233 TSC_hg19_v1_chr8_-_102217845 BC015925 AF125099 AF275802 AF275809 AK290477 BC068524	38909	-	TSC_hg19_v1_chr8_-_102217877 NM_001042511	39092	-	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	39170	-	NM_003406|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##M86400|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135699|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##BC035233|ZNF706|51123|zinc finger protein 706##BC015925|ZNF706|51123|zinc finger protein 706##AF125099|ZNF706|51123|zinc finger protein 706##AF275802|ZNF706|51123|zinc finger protein 706##AF275809|ZNF706|51123|zinc finger protein 706##AK290477|ZNF706|51123|zinc finger protein 706##BC068524|ZNF706|51123|zinc finger protein 706##NM_001042511|ZNF706|51123|zinc finger protein 706##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706	0.0	
chr8	103423969	103424150	reg1037707.p1	3.741	+	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	-172886	-	NM_001040630	-286925	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	-287536	-	TSC_hg19_v1_chr8_-_103424923 AB020703 BC151231 NM_015902	852	-	NM_024410 AK315276 BC104456 BC104457	139802	+	BC011538 NM_001032282 S81439	242033	-	AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001040630|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##AB020703|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##BC151231|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_015902|UBR5|51366|ubiquitin protein ligase E3 component n-recognin 5##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10	0.0	
chr8	6635993	6636079	reg1029090.p2	3.741	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	-69853	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	-70096	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	-70145	+	AY534243 AY358489 AY534242 NM_207411	57056	-	BC033298 BC047677 X92744 U73945 NM_005218	99447	-	M98331 BC093951 BC093953 BC069667 BC069710 BC069728 BC069769 NM_001926	147549	-	AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AY534243|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY358489|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY534242|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##NM_207411|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##BC033298|DEFB1|1672|defensin, beta 1##BC047677|DEFB1|1672|defensin, beta 1##X92744|DEFB1|1672|defensin, beta 1##U73945|DEFB1|1672|defensin, beta 1##NM_005218|DEFB1|1672|defensin, beta 1##M98331|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093951|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093953|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069667|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069710|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069728|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069769|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##NM_001926|DEFA6|1671|defensin, alpha 6, Paneth cell-specific	0.0	
chrX	105995713	105995789	reg1036669.p1	3.741	+	TSC_hg19_v1_chrX_+_105969932 AK074264 NM_194463 BC063404 AF394689 CU687692	-25743	+	BC036901 NM_024539 AK126553	-58676	+	NM_001184782 NM_018015 TSC_hg19_v1_chrX_+_105855208 BC047503 AK001040 BC070110 AK291730 BC011483 BC033709 BC054032 CU687040 CU689708	-140517	+	TSC_hg19_v1_chrX_+_106045925 AK123957 NM_017752 NM_198881 BC122564 BX648230 AB449890 AB449891	50230	+	AF177340 NM_001171092	147642	+	BC007652 BC101998 BC105691 BC105692 BC110436 BC127250 NM_001171706 NM_138382	150802	-	AK074264|RNF128|79589|ring finger protein 128##NM_194463|RNF128|79589|ring finger protein 128##BC063404|RNF128|79589|ring finger protein 128##AF394689|RNF128|79589|ring finger protein 128##BC036901|RNF128|79589|ring finger protein 128##NM_024539|RNF128|79589|ring finger protein 128##AK126553|RNF128|79589|ring finger protein 128##NM_001184782|CXorf57|55086|chromosome X open reading frame 57##NM_018015|CXorf57|55086|chromosome X open reading frame 57##BC047503|CXorf57|55086|chromosome X open reading frame 57##AK001040|CXorf57|55086|chromosome X open reading frame 57##BC070110|CXorf57|55086|chromosome X open reading frame 57##AK291730|CXorf57|55086|chromosome X open reading frame 57##BC011483|CXorf57|55086|chromosome X open reading frame 57##BC033709|CXorf57|55086|chromosome X open reading frame 57##BC054032|CXorf57|55086|chromosome X open reading frame 57##AK123957|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_017752|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##NM_198881|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BC122564|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##BX648230|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449890|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AB449891|TBC1D8B|54885|TBC1 domain family, member 8B (with GRAM domain)##AF177340|CLDN2|9075|claudin 2##NM_001171092|CLDN2|9075|claudin 2##BC007652|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC101998|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC105691|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC105692|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC110436|RIPPLY1|92129|ripply1 homolog (zebrafish)##BC127250|RIPPLY1|92129|ripply1 homolog (zebrafish)##NM_001171706|RIPPLY1|92129|ripply1 homolog (zebrafish)##NM_138382|RIPPLY1|92129|ripply1 homolog (zebrafish)	0.015808	
chrX	19212521	19212695	reg1040898.p1	3.741	+	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	-71941	-	TSC_hg19_v1_chrX_-_19002476 NM_000292	-210146	-	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	-503564	+	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	149474	+	NM_001001671	320770	-	TSC_hg19_v1_chrX_-_19689029 AK293237 NM_001184960	476448	-	BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001001671|MAP3K15|389840|mitogen-activated protein kinase kinase kinase 15##AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1	0.269377	CTCF.p2:-8:0.269
chr1	201223610	201223707	reg1000632.p1	3.740	+	BC033185 NM_001164586	-63706	+	AK075335 AY138587 AK296307 TSC_hg19_v1_chr1_-_201123603 BC001106 AL136600 AK054883 AK303843 NM_016456	-100046	-	TSC_hg19_v1_chr1_-_201123569 AK091726	-100087	-	NM_000299 NM_001005337 Z34974 AK315291 X79293 BC114571 BC115702	28979	+	TSC_hg19_v1_chr1_-_201342319 X79855 X79856 X79858 CU678094 S64668 X74819 X79859	118722	-	TSC_hg19_v1_chr1_-_201346783 L40162 AY277394 X79861 BC002653	123130	-	BC033185|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##NM_001164586|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##AK075335|TMEM9|252839|transmembrane protein 9##AY138587|TMEM9|252839|transmembrane protein 9##AK296307|TMEM9|252839|transmembrane protein 9##BC001106|TMEM9|252839|transmembrane protein 9##AL136600|TMEM9|252839|transmembrane protein 9##AK054883|TMEM9|252839|transmembrane protein 9##AK303843|TMEM9|252839|transmembrane protein 9##NM_016456|TMEM9|252839|transmembrane protein 9##AK091726|TMEM9|252839|transmembrane protein 9##NM_000299|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##NM_001005337|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##Z34974|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##AK315291|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##X79293|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC114571|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC115702|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##X79855|TNNT2|7139|troponin T type 2 (cardiac)##X79856|TNNT2|7139|troponin T type 2 (cardiac)##X79858|TNNT2|7139|troponin T type 2 (cardiac)##S64668|TNNT2|7139|troponin T type 2 (cardiac)##X74819|TNNT2|7139|troponin T type 2 (cardiac)##X79859|TNNT2|7139|troponin T type 2 (cardiac)##L40162|TNNT2|7139|troponin T type 2 (cardiac)##AY277394|TNNT2|7139|troponin T type 2 (cardiac)##X79861|TNNT2|7139|troponin T type 2 (cardiac)##BC002653|TNNT2|7139|troponin T type 2 (cardiac)	0.0	
chr12	112820406	112820494	reg1037231.p1	3.740	+	TSC_hg19_v1_chr12_-_112819755 NM_001109662	-625	-	TSC_hg19_v1_chr12_-_112630525 AF174498	-189922	-	TSC_hg19_v1_chr12_+_112563363 AK122620 AK291331 AK295474 AB007447	-257059	+	TSC_hg19_v1_chr12_-_112847411 BC022444 X69391 BC004138 BC104824 BC104826 AK308680 NM_000970 NM_001024662	26955	-	NM_002834 TSC_hg19_v1_chr12_+_112856698	36166	+	TSC_hg19_v1_chr12_+_112856714 BC008692 L08807	36277	+	NM_001109662|C12orf51|283450|chromosome 12 open reading frame 51##AF174498|C12orf51|283450|chromosome 12 open reading frame 51##AK122620|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK291331|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK295474|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AB007447|TRAFD1|10906|TRAF-type zinc finger domain containing 1##BC022444|RPL6|6128|ribosomal protein L6##X69391|RPL6|6128|ribosomal protein L6##BC004138|RPL6|6128|ribosomal protein L6##BC104824|RPL6|6128|ribosomal protein L6##BC104826|RPL6|6128|ribosomal protein L6##NM_000970|RPL6|6128|ribosomal protein L6##NM_001024662|RPL6|6128|ribosomal protein L6##NM_002834|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##BC008692|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11##L08807|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11	0.0	
chr12	12715692	12715860	reg1034547.p1	3.740	+	AB052156 BC109234 BC109235 AF506796 NM_030640 TSC_hg19_v1_chr12_-_12715528	-376	-	TSC_hg19_v1_chr12_+_12510051 NM_058169 AK075028 BC013668 AY037865 AY037866 DQ891778 DQ894962 CU680646	-205611	+	AY358563 TSC_hg19_v1_chr12_-_12503210 AK023622 NM_018050 AK001160 BC032998	-212604	-	TSC_hg19_v1_chr12_+_12764831 BC106052 AF039081 NM_001310 AK307202	49019	+	TSC_hg19_v1_chr12_+_12764861 BC104873 BC112157	49107	+	AK096388 NM_006143	133344	-	AB052156|DUSP16|80824|dual specificity phosphatase 16##BC109234|DUSP16|80824|dual specificity phosphatase 16##BC109235|DUSP16|80824|dual specificity phosphatase 16##AF506796|DUSP16|80824|dual specificity phosphatase 16##NM_030640|DUSP16|80824|dual specificity phosphatase 16##NM_058169|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AK075028|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##BC013668|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037865|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY037866|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ891778|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##DQ894962|LOH12CR1|118426|loss of heterozygosity, 12, chromosomal region 1##AY358563|MANSC1|54682|MANSC domain containing 1##AK023622|MANSC1|54682|MANSC domain containing 1##NM_018050|MANSC1|54682|MANSC domain containing 1##AK001160|MANSC1|54682|MANSC domain containing 1##BC032998|MANSC1|54682|MANSC domain containing 1##BC106052|CREBL2|1389|cAMP responsive element binding protein-like 2##AF039081|CREBL2|1389|cAMP responsive element binding protein-like 2##NM_001310|CREBL2|1389|cAMP responsive element binding protein-like 2##AK307202|CREBL2|1389|cAMP responsive element binding protein-like 2##BC104873|CREBL2|1389|cAMP responsive element binding protein-like 2##BC112157|CREBL2|1389|cAMP responsive element binding protein-like 2##AK096388|GPR19|2842|G protein-coupled receptor 19##NM_006143|GPR19|2842|G protein-coupled receptor 19	0.0	
chr1	45860119	45860204	reg1028467.p2	3.740	+	TSC_hg19_v1_chr1_+_45805883 AK298162 AK093320 BC009364 CU679325 CR457320	-54261	+	AB032924 AB032925 AB032926 AB025227 NM_001048174 AB032927 AB032928 AB032929 NM_001048172 NM_001048173 CU678424 AB590565 AB032920 AB032921 AB032922 AB032923 BC003178 AK293830 NM_001048171 NM_001128425 NM_012222	-54288	-	TSC_hg19_v1_chr1_+_45805845 AK024011	-54332	+	TSC_hg19_v1_chr1_-_45956836 BX648441 AK027573 AK294172 BC022194 AB057597 AJ132545 AK299269 NM_007170 AK302494	96672	-	AK098537 NM_015506 TSC_hg19_v1_chr1_+_45965990 AL080062 BC006122	105778	+	X67951 L19184 TSC_hg19_v1_chr1_-_45987557 AK311898 BC007063 AK131049 BC021683 NM_002574 NM_181696 NM_181697	127417	-	AK298162|TOE1|114034|target of EGR1, member 1 (nuclear)##AK093320|TOE1|114034|target of EGR1, member 1 (nuclear)##BC009364|TOE1|114034|target of EGR1, member 1 (nuclear)##CR457320|TOE1|114034|target of EGR1, member 1 (nuclear)##AB032924|MUTYH|4595|mutY homolog (E. coli)##AB032925|MUTYH|4595|mutY homolog (E. coli)##AB032926|MUTYH|4595|mutY homolog (E. coli)##AB025227|MUTYH|4595|mutY homolog (E. coli)##NM_001048174|MUTYH|4595|mutY homolog (E. coli)##AB032927|MUTYH|4595|mutY homolog (E. coli)##AB032928|MUTYH|4595|mutY homolog (E. coli)##AB032929|MUTYH|4595|mutY homolog (E. coli)##NM_001048172|MUTYH|4595|mutY homolog (E. coli)##NM_001048173|MUTYH|4595|mutY homolog (E. coli)##AB032920|MUTYH|4595|mutY homolog (E. coli)##AB032921|MUTYH|4595|mutY homolog (E. coli)##AB032922|MUTYH|4595|mutY homolog (E. coli)##AB032923|MUTYH|4595|mutY homolog (E. coli)##BC003178|MUTYH|4595|mutY homolog (E. coli)##AK293830|MUTYH|4595|mutY homolog (E. coli)##NM_001048171|MUTYH|4595|mutY homolog (E. coli)##NM_001128425|MUTYH|4595|mutY homolog (E. coli)##NM_012222|MUTYH|4595|mutY homolog (E. coli)##AK024011|TOE1|114034|target of EGR1, member 1 (nuclear)##BX648441|TESK2|10420|testis-specific kinase 2##AK027573|TESK2|10420|testis-specific kinase 2##AK294172|TESK2|10420|testis-specific kinase 2##BC022194|TESK2|10420|testis-specific kinase 2##AB057597|TESK2|10420|testis-specific kinase 2##AJ132545|TESK2|10420|testis-specific kinase 2##AK299269|TESK2|10420|testis-specific kinase 2##NM_007170|TESK2|10420|testis-specific kinase 2##AK302494|TESK2|10420|testis-specific kinase 2##AK098537|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##NM_015506|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##AL080062|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BC006122|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##X67951|PRDX1|5052|peroxiredoxin 1##L19184|PRDX1|5052|peroxiredoxin 1##AK311898|PRDX1|5052|peroxiredoxin 1##BC007063|PRDX1|5052|peroxiredoxin 1##AK131049|PRDX1|5052|peroxiredoxin 1##BC021683|PRDX1|5052|peroxiredoxin 1##NM_002574|PRDX1|5052|peroxiredoxin 1##NM_181696|PRDX1|5052|peroxiredoxin 1##NM_181697|PRDX1|5052|peroxiredoxin 1	0.0	
chr14	99738537	99738643	reg1032639.p1	3.740	+	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	-700	-	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	-973	-	AK098639 NM_182560	-560641	+	BC120967 BC120968 BC127624 BC127625 TSC_hg19_v1_chr14_-_99947104	208504	-	TSC_hg19_v1_chr14_-_99947132 BC066931 BX161441	208532	-	TSC_hg19_v1_chr14_-_99947170 BC037395	208589	-	AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##BC120967|SETD3|84193|SET domain containing 3##BC120968|SETD3|84193|SET domain containing 3##BC127624|SETD3|84193|SET domain containing 3##BC127625|SETD3|84193|SET domain containing 3##BC066931|SETD3|84193|SET domain containing 3##BX161441|SETD3|84193|SET domain containing 3##BC037395|SETD3|84193|SET domain containing 3	0.0	
chr20	53759583	53759732	reg1035354.p2	3.740	+	TSC_hg19_v1_chr20_+_53092131 BC008992 NM_018431 AF132732 AK313222	-667443	+	TSC_hg19_v1_chr20_+_52824630 AK312059 BC010953 U41816	-935020	+	TSC_hg19_v1_chr20_+_52824396 NM_002623	-935210	+	NM_080617	820354	-	BC069105 NM_019888 AB529241 AY227893 BC069591 BC069599 BC096702 BC096737 BC098169 BC098351 CU686926	1064130	+	NM_080821 TSC_hg19_v1_chr20_+_54934029 AK314768 AJ311123 BC017725 AK075565	1174367	+	BC008992|DOK5|55816|docking protein 5##NM_018431|DOK5|55816|docking protein 5##AF132732|DOK5|55816|docking protein 5##AK313222|DOK5|55816|docking protein 5##AK312059|PFDN4|5203|prefoldin subunit 4##BC010953|PFDN4|5203|prefoldin subunit 4##U41816|PFDN4|5203|prefoldin subunit 4##NM_002623|PFDN4|5203|prefoldin subunit 4##NM_080617|CBLN4|140689|cerebellin 4 precursor##BC069105|MC3R|4159|melanocortin 3 receptor##NM_019888|MC3R|4159|melanocortin 3 receptor##AY227893|MC3R|4159|melanocortin 3 receptor##BC069591|MC3R|4159|melanocortin 3 receptor##BC069599|MC3R|4159|melanocortin 3 receptor##BC096702|MC3R|4159|melanocortin 3 receptor##BC096737|MC3R|4159|melanocortin 3 receptor##BC098169|MC3R|4159|melanocortin 3 receptor##BC098351|MC3R|4159|melanocortin 3 receptor##NM_080821|FAM210B|116151|family with sequence similarity 210, member B##AK314768|FAM210B|116151|family with sequence similarity 210, member B##AJ311123|FAM210B|116151|family with sequence similarity 210, member B##BC017725|FAM210B|116151|family with sequence similarity 210, member B##AK075565|FAM210B|116151|family with sequence similarity 210, member B	0.0	
chr22	26988596	26988702	reg1034824.p1	3.740	+	TSC_hg19_v1_chr22_-_26986083 AK074538 NM_003595	-2569	-	TSC_hg19_v1_chr22_-_26986070 AK304545 BC001057 AL136623	-2582	-	TSC_hg19_v1_chr22_-_26986052 AF049891 BC017509	-2598	-	CR456425 NM_001887 U35340 TSC_hg19_v1_chr22_-_27013992	25334	-	BC036790 TSC_hg19_v1_chr22_-_27014064	25413	-	BC069404 CR456424 NM_001886 U59057 AB528112 CU012985 CU013273 BC096171 BC096172 BC096173 BC096174	29282	+	AK074538|TPST2|8459|tyrosylprotein sulfotransferase 2##NM_003595|TPST2|8459|tyrosylprotein sulfotransferase 2##AK304545|TPST2|8459|tyrosylprotein sulfotransferase 2##BC001057|TPST2|8459|tyrosylprotein sulfotransferase 2##AL136623|TPST2|8459|tyrosylprotein sulfotransferase 2##AF049891|TPST2|8459|tyrosylprotein sulfotransferase 2##BC017509|TPST2|8459|tyrosylprotein sulfotransferase 2##CR456425|CRYBB1|1414|crystallin, beta B1##NM_001887|CRYBB1|1414|crystallin, beta B1##U35340|CRYBB1|1414|crystallin, beta B1##BC036790|CRYBB1|1414|crystallin, beta B1##BC069404|CRYBA4|1413|crystallin, beta A4##CR456424|CRYBA4|1413|crystallin, beta A4##NM_001886|CRYBA4|1413|crystallin, beta A4##U59057|CRYBA4|1413|crystallin, beta A4##CU012985|CRYBA4|1413|crystallin, beta A4##CU013273|CRYBA4|1413|crystallin, beta A4##BC096171|CRYBA4|1413|crystallin, beta A4##BC096172|CRYBA4|1413|crystallin, beta A4##BC096173|CRYBA4|1413|crystallin, beta A4##BC096174|CRYBA4|1413|crystallin, beta A4	0.0	
chr7	115347470	115347566	reg1033928.p2	3.740	+	BC040713 TSC_hg19_v1_chr7_+_114562979 AY196485	-784562	+	TSC_hg19_v1_chr7_+_114562148 AF054589 NM_001166345 NM_001166346 NM_199072	-785344	+	AF467253 NM_001172767 NM_148899 U80741 AF467258 AF467259 TSC_hg19_v1_chr7_+_114066703	-1280888	+	AJ608795 NM_001244583	260848	-	TSC_hg19_v1_chr7_-_115670796 D43945 BC029891	323268	-	TSC_hg19_v1_chr7_-_115670820 AK313546	323300	-	BC040713|MDFIC|29969|MyoD family inhibitor domain containing##AY196485|MDFIC|29969|MyoD family inhibitor domain containing##AF054589|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166345|MDFIC|29969|MyoD family inhibitor domain containing##NM_001166346|MDFIC|29969|MyoD family inhibitor domain containing##NM_199072|MDFIC|29969|MyoD family inhibitor domain containing##AF467253|FOXP2|93986|forkhead box P2##NM_001172767|FOXP2|93986|forkhead box P2##NM_148899|FOXP2|93986|forkhead box P2##AF467258|FOXP2|93986|forkhead box P2##AF467259|FOXP2|93986|forkhead box P2##AJ608795|TFEC|22797|transcription factor EC##NM_001244583|TFEC|22797|transcription factor EC##D43945|TFEC|22797|transcription factor EC##BC029891|TFEC|22797|transcription factor EC##AK313546|TFEC|22797|transcription factor EC	0.556898	CTCF.p2:-28:0.399
chr7	140962080	140962155	reg1039307.p1	3.740	+	NM_001195278	-188086	+	NM_053035 TSC_hg19_v1_chr7_-_140714792	-247331	-	TSC_hg19_v1_chr7_-_140714748 AF078858 BC105793	-247367	-	NM_018238 TSC_hg19_v1_chr7_+_141251215 AK304502 AK001704 AK299131 AK222769 AJ278150 BC009775	289040	+	TSC_hg19_v1_chr7_-_141401967 AB032973 NM_001080392 AB384573	439817	-	AK131218 NM_001105558	446035	+	NM_001195278|LOC100507421|100507421|transmembrane protein 178-like##NM_053035|MRPS33|51650|mitochondrial ribosomal protein S33##AF078858|MRPS33|51650|mitochondrial ribosomal protein S33##BC105793|MRPS33|51650|mitochondrial ribosomal protein S33##NM_018238|AGK|55750|acylglycerol kinase##AK304502|AGK|55750|acylglycerol kinase##AK001704|AGK|55750|acylglycerol kinase##AK299131|AGK|55750|acylglycerol kinase##AK222769|AGK|55750|acylglycerol kinase##AJ278150|AGK|55750|acylglycerol kinase##BC009775|AGK|55750|acylglycerol kinase##AB032973|KIAA1147|57189|KIAA1147##NM_001080392|KIAA1147|57189|KIAA1147##AK131218|WEE2|494551|WEE1 homolog 2 (S. pombe)##NM_001105558|WEE2|494551|WEE1 homolog 2 (S. pombe)	0.737154	CTCF.p2:-14:0.737
chr8	37409218	37409348	reg1035421.p2	3.740	+	NM_001031836 AK302391 BC028701	-767413	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-2316296	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-3951788	-	TSC_hg19_v1_chr8_-_37457377 AK025743	48085	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	144034	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	184823	+	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2	0.97988	CTCF.p2:-30:0.980
chr9	73193725	73193835	reg1033767.p1	3.740	+	D31716 S72504 NM_001206	-164225	-	AB451404 CU686806 AB464604 EU446889 TSC_hg19_v1_chr9_-_73028875 BC074879 BC074880 AK313631 BC069431	-165105	-	TSC_hg19_v1_chr9_+_72873993 AB385355 AJ310550 DQ893364 DQ896768	-319791	+	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	290180	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	542756	-	AL136545 TSC_hg19_v1_chr9_-_74061901	868103	-	D31716|KLF9|687|Kruppel-like factor 9##S72504|KLF9|687|Kruppel-like factor 9##NM_001206|KLF9|687|Kruppel-like factor 9##AB451404|KLF9|687|Kruppel-like factor 9##EU446889|KLF9|687|Kruppel-like factor 9##BC074879|KLF9|687|Kruppel-like factor 9##BC074880|KLF9|687|Kruppel-like factor 9##AK313631|KLF9|687|Kruppel-like factor 9##BC069431|KLF9|687|Kruppel-like factor 9##AJ310550|SMC5|23137|structural maintenance of chromosomes 5##DQ893364|SMC5|23137|structural maintenance of chromosomes 5##DQ896768|SMC5|23137|structural maintenance of chromosomes 5##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3	0.0	
chrX	108716811	108716901	reg1026743.p2	3.740	+	NM_003604 AF007567	-737234	-	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	-1033772	+	BT007228 L22763 U04845 NM_001847 BC005305	-1034193	-	NM_001522 L37378	8429	-	AK023289 NM_018698 BC120984 BC120985	62158	+	NM_001242617 TSC_hg19_v1_chrX_+_108780077 AF201942 BC014888 AF212223	63227	+	NM_003604|IRS4|8471|insulin receptor substrate 4##AF007567|IRS4|8471|insulin receptor substrate 4##BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##NM_001522|GUCY2F|2986|guanylate cyclase 2F, retinal##L37378|GUCY2F|2986|guanylate cyclase 2F, retinal##AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2##AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2##BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2##AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2	0.0	
chrX	1620209	1620347	reg1037593.p2	3.740	+	AK301844 NM_001173473	-47627	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-48477	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-109309	-	BC043610 GQ280263 NM_178129 AK126147	35760	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	90251	+	NM_004043 U11090	94069	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr10	125802877	125803027	reg1038217.p1	3.739	+	BC137492 BC146862 AY358565 NM_198148	-151456	-	AJ505757 NM_153442 BC112011 BC113462	-377075	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-888596	+	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	48947	-	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	50201	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	304521	-	BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase	0.0	
chr1	1677769	1677950	reg1021693.p1	3.739	+	AL049665 NM_001199787 NM_182838 TSC_hg19_v1_chr1_-_1677454 BC110653	-398	-	TSC_hg19_v1_chr1_-_1655767 AK303446 AF067518 AF067519 AF067520 AF067521 AF067522 AF067523 AK301495 AK304679 BC009375 AF067512 AF067513 AF067514 AF067515 AF067516 AF067517 AK303451 NM_033486 NM_033487 NM_033488 NM_033489 NM_033492 NM_033493 U04816 U04817 U04818 U04824 U07704 U07705 NM_024011 NM_033529	-22083	-	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	-53642	-	AK296722 NM_001198995	12221	-	TSC_hg19_v1_chr1_-_1709864 AK291728 AK290161 AK023114 NM_023018	32027	-	BC001709 TSC_hg19_v1_chr1_-_1710295 AK291599 NM_001198993	32410	-	AL049665|SLC35E2|9906|solute carrier family 35, member E2##NM_001199787|SLC35E2|9906|solute carrier family 35, member E2##NM_182838|SLC35E2|9906|solute carrier family 35, member E2##BC110653|SLC35E2B|728661|solute carrier family 35, member E2B##AK303446|CDK11B|984|cyclin-dependent kinase 11B##AF067518|CDK11A|728642|cyclin-dependent kinase 11A##AF067519|CDK11A|728642|cyclin-dependent kinase 11A##AF067520|CDK11A|728642|cyclin-dependent kinase 11A##AF067521|CDK11A|728642|cyclin-dependent kinase 11A##AF067522|CDK11A|728642|cyclin-dependent kinase 11A##AF067523|CDK11A|728642|cyclin-dependent kinase 11A##AK301495|CDK11B|984|cyclin-dependent kinase 11B##AK304679|CDK11B|984|cyclin-dependent kinase 11B##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AF067512|CDK11B|984|cyclin-dependent kinase 11B##AF067513|CDK11B|984|cyclin-dependent kinase 11B##AF067514|CDK11B|984|cyclin-dependent kinase 11B##AF067515|CDK11B|984|cyclin-dependent kinase 11B##AF067516|CDK11B|984|cyclin-dependent kinase 11B##AF067517|CDK11B|984|cyclin-dependent kinase 11B##AK303451|CDK11B|984|cyclin-dependent kinase 11B##NM_033486|CDK11B|984|cyclin-dependent kinase 11B##NM_033487|CDK11B|984|cyclin-dependent kinase 11B##NM_033488|CDK11B|984|cyclin-dependent kinase 11B##NM_033489|CDK11B|984|cyclin-dependent kinase 11B##NM_033492|CDK11B|984|cyclin-dependent kinase 11B##NM_033493|CDK11B|984|cyclin-dependent kinase 11B##U04816|CDK11B|984|cyclin-dependent kinase 11B##U04817|CDK11B|984|cyclin-dependent kinase 11B##U04818|CDK11B|984|cyclin-dependent kinase 11B##U04824|CDK11B|984|cyclin-dependent kinase 11B##U07704|CDK11A|728642|cyclin-dependent kinase 11A##U07705|CDK11A|728642|cyclin-dependent kinase 11A##NM_024011|CDK11A|728642|cyclin-dependent kinase 11A##NM_033529|CDK11A|728642|cyclin-dependent kinase 11A##AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B##AK296722|NADK|65220|NAD kinase##NM_001198995|NADK|65220|NAD kinase##AK291728|NADK|65220|NAD kinase##AK290161|NADK|65220|NAD kinase##AK023114|NADK|65220|NAD kinase##NM_023018|NADK|65220|NAD kinase##BC001709|NADK|65220|NAD kinase##AK291599|NADK|65220|NAD kinase##NM_001198993|NADK|65220|NAD kinase	0.0	
chr1	206965076	206965197	reg1035559.p1	3.739	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-19257	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-106665	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-156026	+	AY040367 NM_153758 AB463800	7090	+	AF453946 NM_013371	37085	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	74039	+	AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20	0.0	
chr13	31318624	31318780	reg1029888.p2	3.739	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	-8987	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	-9038	+	AK314143 NM_001204406	-31088	+	NM_032849 AK055635 TSC_hg19_v1_chr13_+_31480407 AL832478 BC040165 BC101624 BC101626 CU691826	161778	+	TSC_hg19_v1_chr13_+_31506809 BC030277 NM_152325 CU688876	188128	+	CU691504 DQ891727 DQ894904 AF039695 TSC_hg19_v1_chr13_-_31735849	417092	-	BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_032849|C13orf33|84935|chromosome 13 open reading frame 33##AK055635|C13orf33|84935|chromosome 13 open reading frame 33##BC040165|C13orf33|84935|chromosome 13 open reading frame 33##BC101624|C13orf33|84935|chromosome 13 open reading frame 33##BC101626|C13orf33|84935|chromosome 13 open reading frame 33##BC030277|C13orf26|122046|chromosome 13 open reading frame 26##NM_152325|C13orf26|122046|chromosome 13 open reading frame 26##DQ891727|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ894904|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AF039695|HSPH1|10808|heat shock 105kDa/110kDa protein 1	0.039235	
chr14	21709540	21709697	reg1037001.p2	3.739	+	NM_001004731 BC137304 BC137305	-85416	-	TSC_hg19_v1_chr14_-_21572798 NM_001102454	-136793	-	AK056849 TSC_hg19_v1_chr14_-_21572428	-137217	-	M16342 BC108658 BX247992 BC089438 BC008364 TSC_hg19_v1_chr14_-_21737587 BC003394 BC071943 BX247961 M29063 AB209527 AK223517 BC066932 AK298906 AK312382 D28382 AK297482 AK299923 AK312338 BC103758 AK292619 BC007052 BC008423 AL833432 BC092433 AK225032 AK302213 NM_001077442 NM_001077443 NM_004500 NM_031314	27953	-	AJ417067 NM_020366	46517	+	AB464256 TSC_hg19_v1_chr14_-_21852126 BC012582 BC064561 BC073849 AK001719	142504	-	NM_001004731|OR5AU1|390445|olfactory receptor, family 5, subfamily AU, member 1##BC137304|OR5AU1|390445|olfactory receptor, family 5, subfamily AU, member 1##BC137305|OR5AU1|390445|olfactory receptor, family 5, subfamily AU, member 1##NM_001102454|ZNF219|51222|zinc finger protein 219##M16342|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC108658|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BX247992|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC089438|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC008364|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC003394|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC071943|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BX247961|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##M29063|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AB209527|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK223517|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC066932|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK298906|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK312382|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##D28382|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK297482|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK299923|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK312338|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC103758|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK292619|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC007052|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC008423|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AL833432|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##BC092433|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK225032|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AK302213|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_001077442|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_001077443|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_004500|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##NM_031314|HNRNPC|3183|heterogeneous nuclear ribonucleoprotein C (C1/C2)##AJ417067|RPGRIP1|57096|retinitis pigmentosa GTPase regulator interacting protein 1##NM_020366|RPGRIP1|57096|retinitis pigmentosa GTPase regulator interacting protein 1##BC012582|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)##BC064561|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)##BC073849|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)##AK001719|SUPT16H|11198|suppressor of Ty 16 homolog (S. cerevisiae)	0.985667	CTCF.p2:-46:0.986
chr17	66255159	66255289	reg1024437.p1	3.739	+	TSC_hg19_v1_chr17_+_66244233 AF208856	-10981	+	NM_001033569 NM_001033570 NM_001033571 NM_001033572 NM_001033574 NM_016627 TSC_hg19_v1_chr17_+_66244216 BC056271 BC050709	-11044	+	TSC_hg19_v1_chr17_+_66097706 BC045718	-157526	+	TSC_hg19_v1_chr17_+_66255280 AY358380 NM_014960	110	+	AX750577 AX750581 U79745 AK313121 AK290417 BC064832 NM_001174166 NM_004694	32106	-	AY691424 CU691786 TSC_hg19_v1_chr17_-_66453638 BC039867 AK301830 AK000917 NM_017983	198387	-	NM_001033569|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033570|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033571|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033572|AMZ2|51321|archaelysin family metallopeptidase 2##NM_001033574|AMZ2|51321|archaelysin family metallopeptidase 2##NM_016627|AMZ2|51321|archaelysin family metallopeptidase 2##BC056271|AMZ2|51321|archaelysin family metallopeptidase 2##BC050709|AMZ2|51321|archaelysin family metallopeptidase 2##BC045718|LOC100499466|100499466|uncharacterized LOC100499466##AY358380|ARSG|22901|arylsulfatase G##NM_014960|ARSG|22901|arylsulfatase G##AX750581|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##U79745|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK313121|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AK290417|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##BC064832|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_001174166|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##NM_004694|SLC16A6|9120|solute carrier family 16, member 6 (monocarboxylic acid transporter 7)##AY691424|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##BC039867|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK301830|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##AK000917|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1##NM_017983|WIPI1|55062|WD repeat domain, phosphoinositide interacting 1	0.0	
chr19	17236634	17236814	reg1021598.p2	3.739	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-50131	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-50403	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-99184	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	89448	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	89481	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	100310	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.0	
chr20	35479309	35479489	reg1043109.p2	3.739	+	TSC_hg19_v1_chr20_-_35444558 AK131491	-34779	-	AK057056 TSC_hg19_v1_chr20_-_35407842	-71623	-	TSC_hg19_v1_chr20_-_35402167 BC035821 AK093031 AX747868 AK290738 NM_001145316 NM_024918 AK301671 AK301840 BC058899 AK023408 BC026011 NM_001145315 NM_001145317 NM_001145318	-77214	-	AK126630 NM_199181	8876	-	TSC_hg19_v1_chr20_-_35492072 NM_080627	12735	-	TSC_hg19_v1_chr20_+_35504544 BC127688 BC130646 BC130648 AK123544 NM_080628 HQ258755	25150	+	AK131491|KIAA0889|140710|KIAA0889##AK057056|KIAA0889|140710|KIAA0889##BC035821|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK093031|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK290738|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145316|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_024918|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301671|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301840|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC058899|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK023408|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC026011|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145315|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145317|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145318|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK126630|KIAA0889|140710|KIAA0889##NM_199181|KIAA0889|140710|KIAA0889##NM_080627|KIAA0889|140710|KIAA0889##BC127688|C20orf118|140711|chromosome 20 open reading frame 118##BC130646|C20orf118|140711|chromosome 20 open reading frame 118##BC130648|C20orf118|140711|chromosome 20 open reading frame 118##AK123544|C20orf118|140711|chromosome 20 open reading frame 118##NM_080628|C20orf118|140711|chromosome 20 open reading frame 118##HQ258755|C20orf118|140711|chromosome 20 open reading frame 118	0.0	
chr2	25640648	25640715	reg1031478.p1	3.739	+	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	-75219	-	TSC_hg19_v1_chr2_-_25565353 AB208833	-75318	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	-75353	-	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	255720	-	AB385496 TSC_hg19_v1_chr2_-_26101159	460448	-	TSC_hg19_v1_chr2_-_26101174 AB084279	460492	-	BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)	0.012568	
chr2	9748190	9748370	reg1037500.p1	3.739	+	TSC_hg19_v1_chr2_-_9695885 U86755 U92649 BC062687 GQ402545 NM_003183 BC146658	-52361	-	TSC_hg19_v1_chr2_-_9695883 AK289829	-52397	-	TSC_hg19_v1_chr2_-_9695874 U69611 U69612	-52430	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	22333	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	22769	-	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	22845	-	U86755|ADAM17|6868|ADAM metallopeptidase domain 17##U92649|ADAM17|6868|ADAM metallopeptidase domain 17##BC062687|ADAM17|6868|ADAM metallopeptidase domain 17##GQ402545|ADAM17|6868|ADAM metallopeptidase domain 17##NM_003183|ADAM17|6868|ADAM metallopeptidase domain 17##BC146658|ADAM17|6868|ADAM metallopeptidase domain 17##AK289829|ADAM17|6868|ADAM metallopeptidase domain 17##U69611|ADAM17|6868|ADAM metallopeptidase domain 17##U69612|ADAM17|6868|ADAM metallopeptidase domain 17##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	0.0	
chr5	130832166	130832301	reg1037162.p1	3.739	+	TSC_hg19_v1_chr5_+_130599794 BC058909	-232433	+	AK312406 TSC_hg19_v1_chr5_+_130599768	-232465	+	TSC_hg19_v1_chr5_+_130599764 BC023555 BC050430	-232477	+	AF478468 AF478469 AB527407 TSC_hg19_v1_chr5_-_130970764	138524	-	BC140820 BC144627 TSC_hg19_v1_chr5_-_130970834	138586	-	BC133703 TSC_hg19_v1_chr5_-_130970893 AF394782 AK302640	138645	-	BC058909|CDC42SE2|56990|CDC42 small effector 2##AK312406|CDC42SE2|56990|CDC42 small effector 2##BC023555|CDC42SE2|56990|CDC42 small effector 2##BC050430|CDC42SE2|56990|CDC42 small effector 2##AF478468|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF478469|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC140820|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC144627|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC133703|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF394782|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AK302640|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	0.104816	
chr8	23267758	23267938	reg1003320.p1	3.739	+	TSC_hg19_v1_chr8_-_23261684 NM_002318	-6150	-	AK222477 AK312266 TSC_hg19_v1_chr8_-_23261634 BC020481 AK293292	-6199	-	TSC_hg19_v1_chr8_-_23261631 U89942	-6220	-	AJ131358 TSC_hg19_v1_chr8_-_23315161 AK300464 AF016032	47306	-	TSC_hg19_v1_chr8_-_23315197 BC034477 NM_001128930 NM_004901	47365	-	NM_016612 TSC_hg19_v1_chr8_+_23386375	118522	+	NM_002318|LOXL2|4017|lysyl oxidase-like 2##AK222477|LOXL2|4017|lysyl oxidase-like 2##AK312266|LOXL2|4017|lysyl oxidase-like 2##BC020481|LOXL2|4017|lysyl oxidase-like 2##AK293292|LOXL2|4017|lysyl oxidase-like 2##U89942|LOXL2|4017|lysyl oxidase-like 2##AJ131358|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AK300464|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##AF016032|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##BC034477|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_001128930|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_004901|ENTPD4|9583|ectonucleoside triphosphate diphosphohydrolase 4##NM_016612|SLC25A37|51312|solute carrier family 25, member 37	0.0	
chr9	112213994	112214118	reg1036660.p2	3.739	+	BX648253 NM_001145369 NM_001145370	-393	-	AK296265 AK296388 AK316118 NM_001145371 NM_001145372	-22843	-	TSC_hg19_v1_chr9_-_112083330 AB032179	-130766	-	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	46533	-	BC039306 NM_001037293 AK095003	189013	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	328559	+	BX648253|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145369|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145370|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296265|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK296388|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316118|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145371|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145372|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AB032179|EPB41L4B|54566|erythrocyte membrane protein band 4.1 like 4B##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough	0.885468	CTCF.p2:28:0.853
chr12	7071273	7071396	reg1035230.p2	3.738	+	TSC_hg19_v1_chr12_+_7060554 AK309037 M74903 AF178946	-10732	+	TSC_hg19_v1_chr12_+_7060550 AK290421	-10786	+	AK223629 TSC_hg19_v1_chr12_+_7060538	-10796	+	TSC_hg19_v1_chr12_-_7079814 AB528395 DQ891808 EU176626 BC014766 BC013228 AF178980 AF150962	8387	-	TSC_hg19_v1_chr12_-_7079828 AK298217 AK301316 AF126021 NM_007273 BC110322 NM_001144831	8541	-	NM_006331 BC055314 TSC_hg19_v1_chr12_+_7080072 AK298207	8675	+	M74903|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AF178946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK290421|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK223629|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ891808|PHB2|11331|prohibitin 2##EU176626|PHB2|11331|prohibitin 2##BC014766|PHB2|11331|prohibitin 2##BC013228|PHB2|11331|prohibitin 2##AF178980|PHB2|11331|prohibitin 2##AF150962|PHB2|11331|prohibitin 2##AK298217|PHB2|11331|prohibitin 2##AK301316|PHB2|11331|prohibitin 2##AF126021|PHB2|11331|prohibitin 2##NM_007273|PHB2|11331|prohibitin 2##BC110322|PHB2|11331|prohibitin 2##NM_001144831|PHB2|11331|prohibitin 2##NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	0.161047	
chr15	30810369	30810454	reg1041780.p1	3.738	+	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	-124699	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-695788	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-696069	-	TSC_hg19_v1_chr15_+_30918372 BC071990	107975	+	BC105788 NM_001039841	108467	+	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	385663	+	BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1	0.79594	CTCF.p2:-6:0.796
chr16	57698291	57698441	reg1037694.p1	3.738	+	NM_001145774 AK297236 AK311156 TSC_hg19_v1_chr16_+_57673403 BC013207	-25049	+	AK312405 NM_001145771 NM_001145772 NM_001145773 NM_201524 NM_201525 TSC_hg19_v1_chr16_+_57662543 AK075555 AK299110	-35912	+	NM_001145770 NM_005682 AK075270 AY358400	-44418	+	AK172801 NM_170776 BC064508 AB049169 AK310124 AK301258 BC044222 AY140959	3841	+	TSC_hg19_v1_chr16_+_57728717 NM_032269 AK292558 BC030661 BC036667 AK093035 AX747872	30363	+	TSC_hg19_v1_chr16_+_57769662 NM_005886	71279	+	NM_001145774|GPR56|9289|G protein-coupled receptor 56##AK297236|GPR56|9289|G protein-coupled receptor 56##AK311156|GPR56|9289|G protein-coupled receptor 56##BC013207|GPR56|9289|G protein-coupled receptor 56##AK312405|GPR56|9289|G protein-coupled receptor 56##NM_001145771|GPR56|9289|G protein-coupled receptor 56##NM_001145772|GPR56|9289|G protein-coupled receptor 56##NM_001145773|GPR56|9289|G protein-coupled receptor 56##NM_201524|GPR56|9289|G protein-coupled receptor 56##NM_201525|GPR56|9289|G protein-coupled receptor 56##AK075555|GPR56|9289|G protein-coupled receptor 56##AK299110|GPR56|9289|G protein-coupled receptor 56##NM_001145770|GPR56|9289|G protein-coupled receptor 56##NM_005682|GPR56|9289|G protein-coupled receptor 56##AK075270|GPR56|9289|G protein-coupled receptor 56##AY358400|GPR56|9289|G protein-coupled receptor 56##AK172801|GPR97|222487|G protein-coupled receptor 97##NM_170776|GPR97|222487|G protein-coupled receptor 97##BC064508|GPR97|222487|G protein-coupled receptor 97##AB049169|GPR97|222487|G protein-coupled receptor 97##AK310124|GPR97|222487|G protein-coupled receptor 97##AK301258|GPR97|222487|G protein-coupled receptor 97##BC044222|GPR97|222487|G protein-coupled receptor 97##AY140959|GPR97|222487|G protein-coupled receptor 97##NM_032269|CCDC135|84229|coiled-coil domain containing 135##AK292558|CCDC135|84229|coiled-coil domain containing 135##BC030661|CCDC135|84229|coiled-coil domain containing 135##BC036667|CCDC135|84229|coiled-coil domain containing 135##AK093035|CCDC135|84229|coiled-coil domain containing 135##NM_005886|KATNB1|10300|katanin p80 (WD repeat containing) subunit B 1	0.709096	CTCF.p2:40:0.709
chr18	67358870	67358991	reg1033741.p1	3.738	+	TSC_hg19_v1_chr18_+_67068214 NM_152721 AY599248 BC096744	-290700	+	NM_024781 CR749520	-893588	+	NM_001093729 AK308114 AK091108	-976411	+	AK313199 TSC_hg19_v1_chr18_-_67615110	256169	-	GU935335 GU935336 U56102 NM_006566	265265	-	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	514008	-	NM_152721|DOK6|220164|docking protein 6##AY599248|DOK6|220164|docking protein 6##BC096744|DOK6|220164|docking protein 6##NM_024781|CCDC102B|79839|coiled-coil domain containing 102B##CR749520|CCDC102B|79839|coiled-coil domain containing 102B##NM_001093729|CCDC102B|79839|coiled-coil domain containing 102B##AK308114|CCDC102B|79839|coiled-coil domain containing 102B##AK091108|CCDC102B|79839|coiled-coil domain containing 102B##AK313199|CD226|10666|CD226 molecule##GU935335|CD226|10666|CD226 molecule##GU935336|CD226|10666|CD226 molecule##U56102|CD226|10666|CD226 molecule##NM_006566|CD226|10666|CD226 molecule##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin	0.0	
chr19	45225766	45225839	reg1030639.p2	3.738	+	BC144608 NM_001039213	-23382	+	BC083499 NM_001127893 NM_020219	-51079	+	TSC_hg19_v1_chr19_+_45147209 AK300349 AK094177 BC015542	-78586	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	26179	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	55354	+	TSC_hg19_v1_chr19_+_45312359 BC014065 NM_001013257 NM_005581 X83425 BC036745 X80026 BC050450 AB463427 CU690688 HE572749	86554	+	BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##BC083499|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_001127893|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_020219|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##AK300349|PVR|5817|poliovirus receptor##AK094177|PVR|5817|poliovirus receptor##BC015542|PVR|5817|poliovirus receptor##NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)	0.0	
chr2	169017525	169017624	reg1031945.p1	3.738	+	NM_020981	-342393	+	EF119711 EF119717 NM_001199144 NM_001199145	-973782	+	EF119718 EF119719 EF119720 EF119721 EF119722 NM_001079810 NM_001199143 NM_152381 AK097519	-1272578	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	86499	-	TSC_hg19_v1_chr2_+_169312764 AK172775	295185	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	295301	+	NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##EF119718|XIRP2|129446|xin actin-binding repeat containing 2##EF119719|XIRP2|129446|xin actin-binding repeat containing 2##EF119720|XIRP2|129446|xin actin-binding repeat containing 2##EF119721|XIRP2|129446|xin actin-binding repeat containing 2##EF119722|XIRP2|129446|xin actin-binding repeat containing 2##NM_001079810|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199143|XIRP2|129446|xin actin-binding repeat containing 2##NM_152381|XIRP2|129446|xin actin-binding repeat containing 2##AK097519|XIRP2|129446|xin actin-binding repeat containing 2##BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##AK172775|CERS6|253782|ceramide synthase 6##NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6	0.077176	
chr2	208490408	208490588	reg1030616.p2	3.738	+	TSC_hg19_v1_chr2_-_208490039 BC009462 AF455817	-415	-	NM_001127395 TSC_hg19_v1_chr2_-_208489987	-509	-	AK093812 AX748320 BC033720 NM_145280	-803	-	TSC_hg19_v1_chr2_+_208576363 AK097751 NM_001142300 NM_152523	85803	+	TSC_hg19_v1_chr2_+_208576365 BC047293	85897	+	TSC_hg19_v1_chr2_+_208576466 BC067253	86002	+	BC009462|METTL21A|151194|methyltransferase like 21A##AF455817|METTL21A|151194|methyltransferase like 21A##NM_001127395|METTL21A|151194|methyltransferase like 21A##AK093812|METTL21A|151194|methyltransferase like 21A##BC033720|METTL21A|151194|methyltransferase like 21A##NM_145280|METTL21A|151194|methyltransferase like 21A##AK097751|CCNYL1|151195|cyclin Y-like 1##NM_001142300|CCNYL1|151195|cyclin Y-like 1##NM_152523|CCNYL1|151195|cyclin Y-like 1##BC047293|CCNYL1|151195|cyclin Y-like 1##BC067253|CCNYL1|151195|cyclin Y-like 1	0.0	
chr4	160237236	160237331	reg1038903.p1	3.738	+	AK294459 NM_014247	-48286	+	AK058100 NM_152543	-280951	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-546998	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	2847868	-	TSC_hg19_v1_chr4_-_164088002 AK097352	3850709	-	TSC_hg19_v1_chr4_-_164088043 AK308601	3850754	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.830069	CTCF.p2:-5:0.830
chr4	77120986	77121105	reg1034382.p1	3.738	+	TSC_hg19_v1_chr4_-_77069551 AB527805 DQ895978 EU176395 AK315160 AK001517 AK299442 AK300036 AK223352 AF157322 AK222752 AK307571 BC012559 BX538002 BC034226 NM_017426	-51453	-	AY543660 BC008397 BC017913 NM_001130016 NM_001179 AK295305 AK308810 AY543655	-125176	+	BT006787 AB590165 CU675091 DQ895703 EU176355 Y15220 U59286 U66096 BC005292 AF002985 AF030514 BC110986 AF352781 BC012532 NM_005409	-163801	-	TSC_hg19_v1_chr4_-_77134713 AB384843 BT006939 CU692412 DQ893535 DQ893757 BC021892	13663	-	TSC_hg19_v1_chr4_-_77134757 AK296519 AK313016	13744	-	D12676 TSC_hg19_v1_chr4_-_77134978	13920	-	DQ895978|NUP54|53371|nucleoporin 54kDa##EU176395|NUP54|53371|nucleoporin 54kDa##AK315160|NUP54|53371|nucleoporin 54kDa##AK001517|NUP54|53371|nucleoporin 54kDa##AK299442|NUP54|53371|nucleoporin 54kDa##AK300036|NUP54|53371|nucleoporin 54kDa##AK223352|NUP54|53371|nucleoporin 54kDa##AF157322|NUP54|53371|nucleoporin 54kDa##AK222752|NUP54|53371|nucleoporin 54kDa##AK307571|NUP54|53371|nucleoporin 54kDa##BC012559|NUP54|53371|nucleoporin 54kDa##BX538002|NUP54|53371|nucleoporin 54kDa##BC034226|NUP54|53371|nucleoporin 54kDa##NM_017426|NUP54|53371|nucleoporin 54kDa##AY543660|ART3|419|ADP-ribosyltransferase 3##BC008397|ART3|419|ADP-ribosyltransferase 3##BC017913|ART3|419|ADP-ribosyltransferase 3##NM_001130016|ART3|419|ADP-ribosyltransferase 3##NM_001179|ART3|419|ADP-ribosyltransferase 3##AK295305|ART3|419|ADP-ribosyltransferase 3##AK308810|ART3|419|ADP-ribosyltransferase 3##AY543655|ART3|419|ADP-ribosyltransferase 3##BT006787|CXCL11|6373|chemokine (C-X-C motif) ligand 11##DQ895703|CXCL11|6373|chemokine (C-X-C motif) ligand 11##EU176355|CXCL11|6373|chemokine (C-X-C motif) ligand 11##Y15220|CXCL11|6373|chemokine (C-X-C motif) ligand 11##U59286|CXCL11|6373|chemokine (C-X-C motif) ligand 11##U66096|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BC005292|CXCL11|6373|chemokine (C-X-C motif) ligand 11##AF002985|CXCL11|6373|chemokine (C-X-C motif) ligand 11##AF030514|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BC110986|CXCL11|6373|chemokine (C-X-C motif) ligand 11##AF352781|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BC012532|CXCL11|6373|chemokine (C-X-C motif) ligand 11##NM_005409|CXCL11|6373|chemokine (C-X-C motif) ligand 11##BT006939|SCARB2|950|scavenger receptor class B, member 2##DQ893535|SCARB2|950|scavenger receptor class B, member 2##DQ893757|SCARB2|950|scavenger receptor class B, member 2##BC021892|SCARB2|950|scavenger receptor class B, member 2##AK296519|SCARB2|950|scavenger receptor class B, member 2##AK313016|SCARB2|950|scavenger receptor class B, member 2##D12676|SCARB2|950|scavenger receptor class B, member 2	0.484734	CTCF.p2:4:0.485
chr4	890189	890299	reg1037515.p1	3.738	+	AK126578 TSC_hg19_v1_chr4_-_819894 AK311921 AB593095 BC002471 NM_006651	-70319	-	TSC_hg19_v1_chr4_-_775606 BC040652 AK055583	-114622	-	TSC_hg19_v1_chr4_+_699570 AK225892 NM_006315 AK057124 AK300290 AK125801	-190614	+	TSC_hg19_v1_chr4_-_925898 BT007015 D88435	35677	-	BC063606 TSC_hg19_v1_chr4_-_926081 BC008668	35841	-	TSC_hg19_v1_chr4_-_926104 AK299554	35862	-	AK126578|CPLX1|10815|complexin 1##AK311921|CPLX1|10815|complexin 1##AB593095|CPLX1|10815|complexin 1##BC002471|CPLX1|10815|complexin 1##NM_006651|CPLX1|10815|complexin 1##BC040652|LOC100129917|100129917|uncharacterized LOC100129917##AK055583|LOC100129917|100129917|uncharacterized LOC100129917##AK225892|PCGF3|10336|polycomb group ring finger 3##NM_006315|PCGF3|10336|polycomb group ring finger 3##AK057124|PCGF3|10336|polycomb group ring finger 3##AK300290|PCGF3|10336|polycomb group ring finger 3##AK125801|PCGF3|10336|polycomb group ring finger 3##BT007015|GAK|2580|cyclin G associated kinase##D88435|GAK|2580|cyclin G associated kinase##BC063606|GAK|2580|cyclin G associated kinase##BC008668|GAK|2580|cyclin G associated kinase##AK299554|GAK|2580|cyclin G associated kinase	0.0	
chr8	134748859	134749003	reg1037110.p1	3.738	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-164834	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-439434	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-545601	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	959863	-	TSC_hg19_v1_chr8_-_135725053 AB463359	976148	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	976343	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr10	75571453	75571633	reg1040990.p1	3.737	+	BC035711 TSC_hg19_v1_chr10_-_75571357 BC052780	-169	-	BC151206 TSC_hg19_v1_chr10_+_75545421	-26123	+	TSC_hg19_v1_chr10_+_75545371 AB020720 NM_001242487 NM_001242488 NM_015037 BC137249 BC137250	-26154	+	TSC_hg19_v1_chr10_-_75571579 BC018681 AK303648 NM_003635	22	-	AB590440 L07044 DQ892365 DQ895574 DQ896692 TSC_hg19_v1_chr10_-_75634275 U66064 AK131199 AK095576 BC034044 AK225771 AK291704 AK301180 NM_001204492 NM_001222 NM_172169 NM_172170 NM_172171 NM_172173	62776	-	NM_001145031 NM_002658 TSC_hg19_v1_chr10_+_75670889 AK297940 AK298560 AK312960	99334	+	BC035711|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##BC151206|KIAA0913|23053|KIAA0913##AB020720|KIAA0913|23053|KIAA0913##NM_001242487|KIAA0913|23053|KIAA0913##NM_001242488|KIAA0913|23053|KIAA0913##NM_015037|KIAA0913|23053|KIAA0913##BC137249|KIAA0913|23053|KIAA0913##BC137250|KIAA0913|23053|KIAA0913##BC018681|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##AK303648|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##NM_003635|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##L07044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ892365|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ895574|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ896692|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##U66064|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK131199|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK095576|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##BC034044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK225771|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK291704|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK301180|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001204492|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001222|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172169|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172170|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172171|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172173|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001145031|PLAU|5328|plasminogen activator, urokinase##NM_002658|PLAU|5328|plasminogen activator, urokinase##AK297940|PLAU|5328|plasminogen activator, urokinase##AK298560|PLAU|5328|plasminogen activator, urokinase##AK312960|PLAU|5328|plasminogen activator, urokinase	0.0	
chr10	99115548	99115662	reg1040220.p1	3.737	+	TSC_hg19_v1_chr10_-_99094476 BC020165 AB045118 NM_012083	-21152	-	TSC_hg19_v1_chr10_-_99094267 BT009770 DQ895557	-21308	-	TSC_hg19_v1_chr10_+_99079028 NM_005479 AK307245 U58975 BC034476 AB074890	-36548	+	TSC_hg19_v1_chr10_-_99160995 CU680388 AK296315	45386	-	TSC_hg19_v1_chr10_-_99161098 AB014590 BC012745 AK022496 NM_001145114 NM_015179	45470	-	TSC_hg19_v1_chr10_-_99185702 BC009463	70143	-	BC020165|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2##AB045118|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2##NM_012083|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2##BT009770|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2##DQ895557|FRAT2|23401|frequently rearranged in advanced T-cell lymphomas 2##NM_005479|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas##AK307245|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas##U58975|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas##BC034476|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas##AB074890|FRAT1|10023|frequently rearranged in advanced T-cell lymphomas##AK296315|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##AB014590|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##BC012745|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##AK022496|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##NM_001145114|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)##NM_015179|RRP12|23223|ribosomal RNA processing 12 homolog (S. cerevisiae)	0.018915	
chr1	187969268	187969368	reg1035332.p1	3.737	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-1171230	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-1319828	-	M33478 NM_002597	-1539091	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	2477417	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	4158285	+	AY643711 NM_001039152	4316803	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.365604	CTCF.p2:-8:0.366
chr11	95846061	95846167	reg1034241.p2	3.737	+	BC052990 BC012086 TSC_hg19_v1_chr11_-_95657272 BC034474 BX647997 NM_001243571 NM_016156 NM_201278 NM_201281 AB028996	-188758	-	AK293243 TSC_hg19_v1_chr11_-_95657092 AK302940 BC040432 AK291277	-189063	-	D42054 BC039711 BC029385 AB385276 AY225092 CU691748 TSC_hg19_v1_chr11_+_95523869	-322274	+	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	230289	-	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	276928	-	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	277060	+	BC052990|MTMR2|8898|myotubularin related protein 2##BC012086|MTMR2|8898|myotubularin related protein 2##BC034474|MTMR2|8898|myotubularin related protein 2##BX647997|MTMR2|8898|myotubularin related protein 2##NM_001243571|MTMR2|8898|myotubularin related protein 2##NM_016156|MTMR2|8898|myotubularin related protein 2##NM_201278|MTMR2|8898|myotubularin related protein 2##NM_201281|MTMR2|8898|myotubularin related protein 2##AB028996|MTMR2|8898|myotubularin related protein 2##AK293243|MTMR2|8898|myotubularin related protein 2##AK302940|MTMR2|8898|myotubularin related protein 2##BC040432|MTMR2|8898|myotubularin related protein 2##AK291277|MTMR2|8898|myotubularin related protein 2##D42054|CEP57|9702|centrosomal protein 57kDa##BC039711|CEP57|9702|centrosomal protein 57kDa##BC029385|CEP57|9702|centrosomal protein 57kDa##AY225092|CEP57|9702|centrosomal protein 57kDa##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)	0.0	
chr15	75495150	75495308	reg1031436.p4	3.737	+	TSC_hg19_v1_chr15_+_75494242 AF495726 BC011379 AK125604	-986	+	BC110367 TSC_hg19_v1_chr15_+_75494233	-996	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	-1017	+	AF263742 NM_001164404	55669	+	AF263742 NM_001145224	79949	+	NM_017828 AK225716 BC033744 AK000459 AK293708 AK057145 AK124968 AK314740 BC069195 BC068998 AL136872	133165	+	AF495726|C15orf39|56905|chromosome 15 open reading frame 39##BC011379|C15orf39|56905|chromosome 15 open reading frame 39##AK125604|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001164404|GOLGA6C|653641|golgin A6 family, member C##AF263742|GOLGA6A|342096|golgin A6 family, member A##NM_001145224|GOLGA6D|653643|golgin A6 family, member D##NM_017828|COMMD4|54939|COMM domain containing 4##AK225716|COMMD4|54939|COMM domain containing 4##BC033744|COMMD4|54939|COMM domain containing 4##AK000459|COMMD4|54939|COMM domain containing 4##AK293708|COMMD4|54939|COMM domain containing 4##AK057145|COMMD4|54939|COMM domain containing 4##AK314740|COMMD4|54939|COMM domain containing 4##BC069195|COMMD4|54939|COMM domain containing 4##BC068998|COMMD4|54939|COMM domain containing 4##AL136872|COMMD4|54939|COMM domain containing 4	0.0	
chr16	12693704	12693787	reg1037061.p1	3.737	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-623172	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-634661	+	NM_001130007	-683227	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	203906	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	203974	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	301723	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr17	16891538	16891646	reg1036651.p1	3.737	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	-16188	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-297988	+	AK131401 NM_020787	-334431	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	54372	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	218021	-	TSC_hg19_v1_chr17_-_17109636 BC031263 AK295282 NM_178836	218065	-	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6##BC031263|PLD6|201164|phospholipase D family, member 6##AK295282|PLD6|201164|phospholipase D family, member 6##NM_178836|PLD6|201164|phospholipase D family, member 6	0.0	
chr17	77388245	77388381	reg1002959.p2	3.737	+	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-317283	+	AF329840 NM_198593 BC021553	-357791	+	TSC_hg19_v1_chr17_+_77020308 AK055541	-368003	+	NM_001082575	90249	-	AY230663 BC041453 NM_178543 AY358622	316576	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	363668	+	AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2	0.0	
chr2	213714910	213714994	reg1033476.p2	3.737	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	-311637	-	AK316425 NM_001122634 AK302778 AY317138	-2256867	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-2293563	+	AK301503 AF130863 NM_016260	300103	-	BC028936 NM_001079526	301380	-	AK124960 NM_001242575	433976	-	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451	0.0	
chr3	119072251	119072346	reg1037917.p1	3.737	+	TSC_hg19_v1_chr3_+_119013513 AK293726 BC112163 BC112165 AB384581 HQ258543	-58678	+	TSC_hg19_v1_chr3_+_119013229 AB033030 NM_020754	-59067	+	TSC_hg19_v1_chr3_-_118959726 AK001006 AK301688 AK314425 BX647468 CR749555 NM_003778 NM_212543	-112561	-	TSC_hg19_v1_chr3_-_119182462 BC003192 BC010070 BC021277 AK222950 AK223248 AK001764 NM_018266	110171	-	TSC_hg19_v1_chr3_+_119187809 NM_152305 AY298903 BC030614 AK295984 AK301002 AK315367 AK222937 AF168711 BC048810 AY358581 AK075444 BC011871 CU688946 CU690580	115527	+	NM_016589 TSC_hg19_v1_chr3_+_119217393 AF139077 AL136622 AK026250 AK225954 AF210057 AL390077 AY358633 AL390090 BC012341 AB528090 AM393632 CU680290 CR457158 CR533524	145175	+	AK293726|ARHGAP31|57514|Rho GTPase activating protein 31##BC112163|ARHGAP31|57514|Rho GTPase activating protein 31##BC112165|ARHGAP31|57514|Rho GTPase activating protein 31##HQ258543|ARHGAP31|57514|Rho GTPase activating protein 31##AB033030|ARHGAP31|57514|Rho GTPase activating protein 31##NM_020754|ARHGAP31|57514|Rho GTPase activating protein 31##AK001006|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK301688|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##AK314425|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BX647468|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##CR749555|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_003778|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##NM_212543|B4GALT4|8702|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4##BC003192|TMEM39A|55254|transmembrane protein 39A##BC010070|TMEM39A|55254|transmembrane protein 39A##BC021277|TMEM39A|55254|transmembrane protein 39A##AK222950|TMEM39A|55254|transmembrane protein 39A##AK223248|TMEM39A|55254|transmembrane protein 39A##AK001764|TMEM39A|55254|transmembrane protein 39A##NM_018266|TMEM39A|55254|transmembrane protein 39A##NM_152305|POGLUT1|56983|protein O-glucosyltransferase 1##AY298903|POGLUT1|56983|protein O-glucosyltransferase 1##BC030614|POGLUT1|56983|protein O-glucosyltransferase 1##AK295984|POGLUT1|56983|protein O-glucosyltransferase 1##AK301002|POGLUT1|56983|protein O-glucosyltransferase 1##AK315367|POGLUT1|56983|protein O-glucosyltransferase 1##AK222937|POGLUT1|56983|protein O-glucosyltransferase 1##AF168711|POGLUT1|56983|protein O-glucosyltransferase 1##BC048810|POGLUT1|56983|protein O-glucosyltransferase 1##AY358581|POGLUT1|56983|protein O-glucosyltransferase 1##AK075444|POGLUT1|56983|protein O-glucosyltransferase 1##NM_016589|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF139077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL136622|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK026250|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK225954|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF210057|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AY358633|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390090|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##BC012341|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AM393632|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR457158|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR533524|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1	0.0	
chr3	136536503	136536684	reg1028629.p1	3.737	+	TSC_hg19_v1_chr3_-_136471221 BC040708 AB210023 AK309934 BC064699 CR749247 NM_005862	-65378	-	S67325 TSC_hg19_v1_chr3_+_135969193 BC013768 AB209009 BC053661 AK295312 AK130359 AK225733 AK303079 AK225215 AL831978 CU680676	-567391	+	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	-567429	+	BC050423 NM_001097599 NM_001097600 NM_025246 TSC_hg19_v1_chr3_+_136537897 BC022557 AK314079 BC000111 AL136661	1326	+	TSC_hg19_v1_chr3_+_136581071 NM_006153 BC006403	44447	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	44499	+	BC040708|STAG1|10274|stromal antigen 1##AB210023|STAG1|10274|stromal antigen 1##AK309934|STAG1|10274|stromal antigen 1##BC064699|STAG1|10274|stromal antigen 1##CR749247|STAG1|10274|stromal antigen 1##NM_005862|STAG1|10274|stromal antigen 1##S67325|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC013768|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AB209009|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC053661|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK295312|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK130359|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225733|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK303079|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AK225215|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##AL831978|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##BC050423|TMEM22|80723|transmembrane protein 22##NM_001097599|TMEM22|80723|transmembrane protein 22##NM_001097600|TMEM22|80723|transmembrane protein 22##NM_025246|TMEM22|80723|transmembrane protein 22##BC022557|TMEM22|80723|transmembrane protein 22##AK314079|TMEM22|80723|transmembrane protein 22##BC000111|TMEM22|80723|transmembrane protein 22##AL136661|TMEM22|80723|transmembrane protein 22##NM_006153|NCK1|4690|NCK adaptor protein 1##BC006403|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1	0.0	
chr3	177069667	177069792	reg1030953.p1	3.737	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-154670	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	-154778	-	TSC_hg19_v1_chr3_-_176914267 BX648935	-155479	-	BC017825 NM_181361	1184494	+	AF209747 NM_005832	1206823	+	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	1719836	-	AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3	0.0	
chr5	141521147	141521272	reg1043479.p1	3.737	+	TSC_hg19_v1_chr5_+_141488389 AB097010 AB097037 BC004317	-32799	+	AK075524 TSC_hg19_v1_chr5_+_141488384	-32825	+	TSC_hg19_v1_chr5_+_141488343 NM_030571 AK315481 AY192728	-32861	+	BC125095 BC125096 TSC_hg19_v1_chr5_-_141704555 AF227516 AF227517	183311	-	TSC_hg19_v1_chr5_-_141704587 AK096464 NM_001127496 NM_030964	183425	-	S67291 S67292 S67294 AB528663 X65778 X65779 M13361 NM_033137 X51943	472499	-	AB097010|NDFIP1|80762|Nedd4 family interacting protein 1##AB097037|NDFIP1|80762|Nedd4 family interacting protein 1##BC004317|NDFIP1|80762|Nedd4 family interacting protein 1##AK075524|NDFIP1|80762|Nedd4 family interacting protein 1##NM_030571|NDFIP1|80762|Nedd4 family interacting protein 1##AK315481|NDFIP1|80762|Nedd4 family interacting protein 1##AY192728|NDFIP1|80762|Nedd4 family interacting protein 1##BC125095|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125096|SPRY4|81848|sprouty homolog 4 (Drosophila)##AF227516|SPRY4|81848|sprouty homolog 4 (Drosophila)##AK096464|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_001127496|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_030964|SPRY4|81848|sprouty homolog 4 (Drosophila)##S67291|FGF1|2246|fibroblast growth factor 1 (acidic)##S67292|FGF1|2246|fibroblast growth factor 1 (acidic)##S67294|FGF1|2246|fibroblast growth factor 1 (acidic)##X65778|FGF1|2246|fibroblast growth factor 1 (acidic)##X65779|FGF1|2246|fibroblast growth factor 1 (acidic)##M13361|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)##X51943|FGF1|2246|fibroblast growth factor 1 (acidic)	0.84891	CTCF.p2:22:0.849
chr5	176433820	176433909	reg1030461.p1	3.737	+	AK304794 BX537376 NM_016290 AK023044 BC032561 BC006078 BC014069 AF349313 NM_001199297 NM_001199298 TSC_hg19_v1_chr5_-_176433806	-276	-	U51333 BC028129 NM_002115	-107541	-	TSC_hg19_v1_chr5_+_176237521 AK131380 NM_133369 BC157824	-196309	+	AK297448 AK297584 NM_012279 TSC_hg19_v1_chr5_+_176449708 AK295549 AF083340 AK026627 AK300065 BC007775 AL359576 CR749692 AK131469 AK300738 AB463365 AM392799 AM393768	15855	+	TSC_hg19_v1_chr5_+_176513910 BC011847 AK301169 AK225280 AK225909 NM_002011 NM_213647 L03840	80018	+	NM_022963 X57205 AF202063 EU826602 AF359241 AB590389 DQ893458 DQ896348 EU826603 JN007471 JN007472 JN007473 JN007474 JN007475 JN007476 JN007477 JN007478 JN007479 JN007480 JN007481 JN007482	82712	+	AK304794|UIMC1|51720|ubiquitin interaction motif containing 1##BX537376|UIMC1|51720|ubiquitin interaction motif containing 1##NM_016290|UIMC1|51720|ubiquitin interaction motif containing 1##AK023044|UIMC1|51720|ubiquitin interaction motif containing 1##BC032561|UIMC1|51720|ubiquitin interaction motif containing 1##BC006078|UIMC1|51720|ubiquitin interaction motif containing 1##AF349313|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199297|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199298|UIMC1|51720|ubiquitin interaction motif containing 1##U51333|HK3|3101|hexokinase 3 (white cell)##BC028129|HK3|3101|hexokinase 3 (white cell)##NM_002115|HK3|3101|hexokinase 3 (white cell)##AK131380|UNC5A|90249|unc-5 homolog A (C. elegans)##NM_133369|UNC5A|90249|unc-5 homolog A (C. elegans)##BC157824|UNC5A|90249|unc-5 homolog A (C. elegans)##AK297448|ZNF346|23567|zinc finger protein 346##NM_012279|ZNF346|23567|zinc finger protein 346##AK295549|ZNF346|23567|zinc finger protein 346##AF083340|ZNF346|23567|zinc finger protein 346##AK026627|ZNF346|23567|zinc finger protein 346##AK300065|ZNF346|23567|zinc finger protein 346##BC007775|ZNF346|23567|zinc finger protein 346##AL359576|ZNF346|23567|zinc finger protein 346##CR749692|ZNF346|23567|zinc finger protein 346##AK131469|ZNF346|23567|zinc finger protein 346##AK300738|ZNF346|23567|zinc finger protein 346##AM392799|ZNF346|23567|zinc finger protein 346##AM393768|ZNF346|23567|zinc finger protein 346##BC011847|FGFR4|2264|fibroblast growth factor receptor 4##AK301169|FGFR4|2264|fibroblast growth factor receptor 4##AK225280|FGFR4|2264|fibroblast growth factor receptor 4##AK225909|FGFR4|2264|fibroblast growth factor receptor 4##NM_002011|FGFR4|2264|fibroblast growth factor receptor 4##NM_213647|FGFR4|2264|fibroblast growth factor receptor 4##L03840|FGFR4|2264|fibroblast growth factor receptor 4##NM_022963|FGFR4|2264|fibroblast growth factor receptor 4##X57205|FGFR4|2264|fibroblast growth factor receptor 4##AF202063|FGFR4|2264|fibroblast growth factor receptor 4##EU826602|FGFR4|2264|fibroblast growth factor receptor 4##AF359241|FGFR4|2264|fibroblast growth factor receptor 4##DQ893458|FGFR4|2264|fibroblast growth factor receptor 4##DQ896348|FGFR4|2264|fibroblast growth factor receptor 4##EU826603|FGFR4|2264|fibroblast growth factor receptor 4	0.0	
chr6	13375774	13375952	reg1034078.p2	3.737	+	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	-47163	-	AK091836 AX747210 NM_001242698	-80046	-	AK290017 NM_001242648 NM_030948 TSC_hg19_v1_chr6_+_12717049	-658820	+	AK027010 NM_001242630	32505	-	AK055131 AF264036 NM_001242628	110535	-	TSC_hg19_v1_chr6_-_13487051 BC148295 BC119005 BC124557	111234	-	AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AK290017|PHACTR1|221692|phosphatase and actin regulator 1##NM_001242648|PHACTR1|221692|phosphatase and actin regulator 1##NM_030948|PHACTR1|221692|phosphatase and actin regulator 1##AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AK055131|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF264036|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242628|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC148295|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC119005|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC124557|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr9	4859153	4859254	reg1040077.p1	3.737	+	TSC_hg19_v1_chr9_+_4839769 EF553527	-19435	+	TSC_hg19_v1_chr9_+_4792995 AJ276894 EU831474 EU831561 AF067172	-66160	+	TSC_hg19_v1_chr9_+_4792936 AK022904 BC001025 AK225872	-66280	+	TSC_hg19_v1_chr9_+_4985085 AK292525	125884	+	TSC_hg19_v1_chr9_+_4985271 AF005216 NM_004972 AF058925	126056	+	AF135824 HQ258002 AF156094 NM_007179 BC126473 BC126475	326410	-	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1##AJ276894|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831474|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831561|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF067172|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK022904|RCL1|10171|RNA terminal phosphate cyclase-like 1##BC001025|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK225872|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK292525|JAK2|3717|Janus kinase 2##AF005216|JAK2|3717|Janus kinase 2##NM_004972|JAK2|3717|Janus kinase 2##AF058925|JAK2|3717|Janus kinase 2##AF135824|INSL6|11172|insulin-like 6##HQ258002|INSL6|11172|insulin-like 6##AF156094|INSL6|11172|insulin-like 6##NM_007179|INSL6|11172|insulin-like 6##BC126473|INSL6|11172|insulin-like 6##BC126475|INSL6|11172|insulin-like 6	0.0	
chr10	135252473	135252564	reg1033532.p2	3.736	+	BC040198 TSC_hg19_v1_chr10_-_135238130 NM_001012508	-14416	-	TSC_hg19_v1_chr10_+_135207660 NM_138384 BC026039 AK308997 BC004409 AK074976 AK293988 BC035721 EU831415 EU831508 BC026725 AK292515 AK125012	-44786	+	AF312698 BC032778 NM_152911 NM_207127 NM_207128 TSC_hg19_v1_chr10_+_135192774 AY541516 AY541513 AY541514 AY541515 AY541517 AY541518 AY541519 AY541520 AY541521 AY541523 AY541524 AY358418 DQ891313 DQ893351 DQ894497 DQ896670	-59761	+	TSC_hg19_v1_chr10_+_135340866 AK290822 NM_000773 J02625 AF182276 DQ149222 BC067435 BC067433 CU688292 AF084225 AJ853939 AJ853940 AJ877238	88414	+	AK309935 AK314978 BC034821 NM_001143763 NM_001143764	126591	-	AY027807 NM_130784	130357	-	BC040198|SPRN|503542|shadow of prion protein homolog (zebrafish)##NM_001012508|SPRN|503542|shadow of prion protein homolog (zebrafish)##NM_138384|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026039|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK308997|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC004409|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK074976|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK293988|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC035721|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831415|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831508|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026725|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK292515|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK125012|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AF312698|PAOX|196743|polyamine oxidase (exo-N4-amino)##BC032778|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_152911|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207127|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207128|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541516|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541513|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541514|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541515|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541517|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541518|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541519|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541520|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541521|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541523|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541524|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY358418|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ891313|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ893351|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ894497|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ896670|PAOX|196743|polyamine oxidase (exo-N4-amino)##AK290822|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##NM_000773|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##J02625|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF182276|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##DQ149222|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067435|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067433|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF084225|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853939|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853940|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ877238|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AK309935|SYCE1|93426|synaptonemal complex central element protein 1##AK314978|SYCE1|93426|synaptonemal complex central element protein 1##BC034821|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143763|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143764|SYCE1|93426|synaptonemal complex central element protein 1##AY027807|SYCE1|93426|synaptonemal complex central element protein 1##NM_130784|SYCE1|93426|synaptonemal complex central element protein 1	0.758478	CTCF.p2:3:0.758
chr1	246493345	246493525	reg1037639.p2	3.736	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-1175127	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-1359752	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-1359805	+	AK024733 NM_022743	87276	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	177119	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	177173	-	AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3	0.0	
chr12	57112912	57112985	reg1031182.p1	3.736	+	TSC_hg19_v1_chr12_-_57082069 AK298147 NM_006601 AK293139	-30841	-	TSC_hg19_v1_chr12_-_57082040 AK298160 L24804 Z69891	-30947	-	TSC_hg19_v1_chr12_-_57081947 AK291945 AK295208	-31008	-	TSC_hg19_v1_chr12_-_57118269 AB463919 CR450295 AY034001	5336	-	BC105120 BC105122 TSC_hg19_v1_chr12_-_57119084 BC106041 AF054187 AY605660 AY911673 X80909 AK311904 AK096699 AK223085 AK293209	6094	-	TSC_hg19_v1_chr12_-_57119316 NM_001113202 NM_001113203	6370	-	AK298147|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##NM_006601|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##AK293139|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##AK298160|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##L24804|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##Z69891|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##AK291945|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##AK295208|PTGES3|10728|prostaglandin E synthase 3 (cytosolic)##CR450295|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY034001|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC105120|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC105122|NACA|4666|nascent polypeptide-associated complex alpha subunit##BC106041|NACA|4666|nascent polypeptide-associated complex alpha subunit##AF054187|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY605660|NACA|4666|nascent polypeptide-associated complex alpha subunit##AY911673|NACA|4666|nascent polypeptide-associated complex alpha subunit##X80909|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK311904|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK096699|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK223085|NACA|4666|nascent polypeptide-associated complex alpha subunit##AK293209|NACA|4666|nascent polypeptide-associated complex alpha subunit##NM_001113202|NACA|4666|nascent polypeptide-associated complex alpha subunit##NM_001113203|NACA|4666|nascent polypeptide-associated complex alpha subunit	0.0	
chr2	135450410	135450546	reg1015410.p2	3.736	+	NM_002410 D17716 AF113921	-438593	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-1124440	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-1271124	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	26078	-	AK125008 NM_138326 BC016018 BC107420 AB071418	145740	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	225919	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.0	
chr2	198479884	198480038	reg1044060.p1	3.736	+	NM_001204094	-98940	+	AF093825 AF151853 TSC_hg19_v1_chr2_+_198380804 AK307497 AL080070 AB015441 AK297294 AK297514 AB590538 AJ580638 CR457371	-99147	+	TSC_hg19_v1_chr2_+_198380776 BC005237 NM_001100819 NM_015387 AK027043 AK292938	-99193	+	AK055136 NM_144629 BC111069 TSC_hg19_v1_chr2_-_198540765	60714	-	NM_138395 TSC_hg19_v1_chr2_+_198570134 AB107013 BC026361 BC126294 AK098121 AK301252 BC009115 HQ258326	90168	+	AF272858 BC033674 AK098824 AK058099 NM_033030	170079	-	NM_001204094|MOB4|25843|MOB family member 4, phocein##AF093825|MOB4|25843|MOB family member 4, phocein##AF151853|MOB4|25843|MOB family member 4, phocein##AK307497|MOB4|25843|MOB family member 4, phocein##AL080070|MOB4|25843|MOB family member 4, phocein##AB015441|MOB4|25843|MOB family member 4, phocein##AK297514|MOB4|25843|MOB family member 4, phocein##AJ580638|MOB4|25843|MOB family member 4, phocein##CR457371|MOB4|25843|MOB family member 4, phocein##BC005237|MOB4|25843|MOB family member 4, phocein##NM_001100819|MOB4|25843|MOB family member 4, phocein##NM_015387|MOB4|25843|MOB family member 4, phocein##AK027043|MOB4|25843|MOB family member 4, phocein##AK292938|MOB4|25843|MOB family member 4, phocein##AK055136|RFTN2|130132|raftlin family member 2##NM_144629|RFTN2|130132|raftlin family member 2##BC111069|RFTN2|130132|raftlin family member 2##NM_138395|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AB107013|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC026361|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC126294|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK098121|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AK301252|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##BC009115|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##HQ258326|MARS2|92935|methionyl-tRNA synthetase 2, mitochondrial##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)	0.420873	CTCF.p2:25:0.421
chr3	72397210	72397302	reg1034290.p2	3.736	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-562985	-	AK313656 NM_173359	-593333	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-593734	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	500292	-	BC017274 TSC_hg19_v1_chr3_-_72897575	500319	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	500336	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr3	79570677	79570751	reg1014764.p2	3.736	+	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	-502127	-	TSC_hg19_v1_chr3_-_78666943 AK025535	-903729	-	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-2481434	+	NM_002941	246344	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	2239983	-	TSC_hg19_v1_chr3_-_81810798 AK312245	2240084	-	NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##AK312245|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.0	
chr4	140478480	140478646	reg1036234.p2	3.736	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-1130	-	AL136904 NM_031296	-103603	+	TSC_hg19_v1_chr4_-_140374867 AK097885	-103689	-	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	108427	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	108571	+	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	595775	-	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AL136904|RAB33B|83452|RAB33B, member RAS oncogene family##NM_031296|RAB33B|83452|RAB33B, member RAS oncogene family##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)	0.0	
chr5	39149156	39149245	reg1031218.p1	3.736	+	TSC_hg19_v1_chr5_-_39074499 AY515854 BC029608 BC137163 BC137164 BC144509 NM_152756	-74703	-	CU688716 DQ891672 DQ894858 TSC_hg19_v1_chr5_-_39074493 AK128358 CR749280	-74715	-	TSC_hg19_v1_chr5_+_38846260 BC125209 BC125210	-302905	+	AF198052 U93049 AF001862 TSC_hg19_v1_chr5_-_39203164	53917	-	BC117449 BC143645 BC015933 BX647195 BX647196 TSC_hg19_v1_chr5_-_39219666 AK130159 AK290403 NM_001465 NM_199335	70429	-	TSC_hg19_v1_chr5_-_39270745 AK297077 NM_001243093	121539	-	AY515854|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC029608|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137163|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137164|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC144509|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##NM_152756|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##DQ891672|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##DQ894858|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AK128358|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##CR749280|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC125209|OSMR|9180|oncostatin M receptor##BC125210|OSMR|9180|oncostatin M receptor##AF198052|FYB|2533|FYN binding protein##U93049|FYB|2533|FYN binding protein##AF001862|FYB|2533|FYN binding protein##BC117449|FYB|2533|FYN binding protein##BC143645|FYB|2533|FYN binding protein##BC015933|FYB|2533|FYN binding protein##BX647195|FYB|2533|FYN binding protein##BX647196|FYB|2533|FYN binding protein##AK130159|FYB|2533|FYN binding protein##AK290403|FYB|2533|FYN binding protein##NM_001465|FYB|2533|FYN binding protein##NM_199335|FYB|2533|FYN binding protein##AK297077|FYB|2533|FYN binding protein##NM_001243093|FYB|2533|FYN binding protein	0.499348	CTCF.p2:3:0.499
chr6	96470245	96470347	reg1037535.p1	3.736	+	NM_006581 AK314966 TSC_hg19_v1_chr6_+_96463867 BC001879 BC036101 AB023021	-6429	+	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	-444895	+	TSC_hg19_v1_chr6_-_96025325 BC047582	-445007	-	TSC_hg19_v1_chr6_+_96969716 NM_015323 BC015377 AK307651 BC036379 BC028608	499403	+	TSC_hg19_v1_chr6_+_96969734 AB018319 CU690338	499443	+	NM_001170807 NM_020482 AK058175 BC029490 BC021723 AK223539	540173	+	NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha##NM_015323|UFL1|23376|UFM1-specific ligase 1##BC015377|UFL1|23376|UFM1-specific ligase 1##AK307651|UFL1|23376|UFM1-specific ligase 1##BC036379|UFL1|23376|UFM1-specific ligase 1##BC028608|UFL1|23376|UFM1-specific ligase 1##AB018319|UFL1|23376|UFM1-specific ligase 1##NM_001170807|FHL5|9457|four and a half LIM domains 5##NM_020482|FHL5|9457|four and a half LIM domains 5##AK058175|FHL5|9457|four and a half LIM domains 5##BC029490|FHL5|9457|four and a half LIM domains 5##BC021723|FHL5|9457|four and a half LIM domains 5##AK223539|FHL5|9457|four and a half LIM domains 5	0.0	
chr7	23510319	23510422	reg1039404.p2	3.736	+	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	-372	-	TSC_hg19_v1_chr7_-_23509637 AB529064 CU688032	-691	-	TSC_hg19_v1_chr7_+_23338957 BC012331 NM_138446 AK127742 AK316559	-171405	+	TSC_hg19_v1_chr7_+_23530136 BC026177	19797	+	CU677835 DQ892442 DQ895653 AB528532 TSC_hg19_v1_chr7_-_23571604 BC069011 BC017094 U53209 AB097048 AK300565 AK311687 AK314801 AK300741 AK310719 AK298815 NM_013293	61194	-	TSC_hg19_v1_chr7_+_23637005 NM_138771 AK289911 AY358713 AX721042	126645	+	BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC012331|C7orf30|115416|chromosome 7 open reading frame 30##NM_138446|C7orf30|115416|chromosome 7 open reading frame 30##AK127742|C7orf30|115416|chromosome 7 open reading frame 30##AK316559|C7orf30|115416|chromosome 7 open reading frame 30##BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32##DQ892442|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##DQ895653|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC069011|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##BC017094|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##U53209|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AB097048|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK300565|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK311687|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK314801|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK300741|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK310719|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##AK298815|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##NM_013293|TRA2A|29896|transformer 2 alpha homolog (Drosophila)##NM_138771|CCDC126|90693|coiled-coil domain containing 126##AK289911|CCDC126|90693|coiled-coil domain containing 126##AY358713|CCDC126|90693|coiled-coil domain containing 126	0.0	
chr8	55195966	55196066	reg1035995.p2	3.736	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-148205	+	TSC_hg19_v1_chr8_-_55014465 CR457103 CU679013 DQ891527 DQ894717 BC010397 AF077198 AF077199 AF291053 AK307277 AK313739 AF081281 AK298206 AK289400 BC008652 AF052112 NM_006330	-181518	-	TSC_hg19_v1_chr8_-_54934990 NM_006756 NM_201437	-260997	-	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	174500	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	332636	+	BC106028 AY534241 NM_052898	818998	+	BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##CR457103|LYPLA1|10434|lysophospholipase I##DQ891527|LYPLA1|10434|lysophospholipase I##DQ894717|LYPLA1|10434|lysophospholipase I##BC010397|LYPLA1|10434|lysophospholipase I##AF077198|LYPLA1|10434|lysophospholipase I##AF077199|LYPLA1|10434|lysophospholipase I##AF291053|LYPLA1|10434|lysophospholipase I##AK307277|LYPLA1|10434|lysophospholipase I##AK313739|LYPLA1|10434|lysophospholipase I##AF081281|LYPLA1|10434|lysophospholipase I##AK298206|LYPLA1|10434|lysophospholipase I##AK289400|LYPLA1|10434|lysophospholipase I##BC008652|LYPLA1|10434|lysophospholipase I##AF052112|LYPLA1|10434|lysophospholipase I##NM_006330|LYPLA1|10434|lysophospholipase I##NM_006756|TCEA1|6917|transcription elongation factor A (SII), 1##NM_201437|TCEA1|6917|transcription elongation factor A (SII), 1##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4	0.028911	
chr9	33452897	33453005	reg1039037.p2	3.736	+	BT007199 CR541991 CR542025 TSC_hg19_v1_chr9_-_33447592 AJ493597 BC013566 AB001325 AK292208 AK303206 AK315760 AK095363 NM_004925	-5365	-	AK297860 TSC_hg19_v1_chr9_-_33402631 AK301949	-50339	-	BC062701 BC119672 BC119673 AB006190 NM_001170 TSC_hg19_v1_chr9_-_33402526	-50436	-	AK026193 TSC_hg19_v1_chr9_-_33465258	12273	-	TSC_hg19_v1_chr9_-_33473861 BC030139	20902	-	TSC_hg19_v1_chr9_-_33473890 BC020450 AK026258 AK293969	20945	-	BT007199|AQP3|360|aquaporin 3 (Gill blood group)##CR541991|AQP3|360|aquaporin 3 (Gill blood group)##CR542025|AQP3|360|aquaporin 3 (Gill blood group)##AJ493597|AQP3|360|aquaporin 3 (Gill blood group)##BC013566|AQP3|360|aquaporin 3 (Gill blood group)##AB001325|AQP3|360|aquaporin 3 (Gill blood group)##AK292208|AQP3|360|aquaporin 3 (Gill blood group)##AK303206|AQP3|360|aquaporin 3 (Gill blood group)##AK315760|AQP3|360|aquaporin 3 (Gill blood group)##AK095363|AQP3|360|aquaporin 3 (Gill blood group)##NM_004925|AQP3|360|aquaporin 3 (Gill blood group)##AK297860|AQP7|364|aquaporin 7##AK301949|AQP7|364|aquaporin 7##BC062701|AQP7|364|aquaporin 7##BC119672|AQP7|364|aquaporin 7##BC119673|AQP7|364|aquaporin 7##AB006190|AQP7|364|aquaporin 7##NM_001170|AQP7|364|aquaporin 7##AK026193|NOL6|65083|nucleolar protein family 6 (RNA-associated)##BC030139|NOL6|65083|nucleolar protein family 6 (RNA-associated)##BC020450|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AK026258|NOL6|65083|nucleolar protein family 6 (RNA-associated)##AK293969|NOL6|65083|nucleolar protein family 6 (RNA-associated)	0.753908	CTCF.p2:4:0.754
chr10	62095602	62095707	reg1035325.p1	3.735	+	AK292927 AK092527 NM_001149	-194938	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-429330	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	-429453	-	U13616 NM_020987	53906	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	237036	-	EU832293 EU832377 AK172736 BX537917 TSC_hg19_v1_chr10_-_62493273 BX648574	397523	-	AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##S72869|CCDC6|8030|coiled-coil domain containing 6##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832293|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##EU832377|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX537917|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##BX648574|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.967601	CTCF.p2:4:0.968
chr1	101185203	101185299	reg1037623.p1	3.735	+	AK225748 TSC_hg19_v1_chr1_+_101004594	-180723	+	AB042410 BC036775 NM_022049	-181542	+	BC071578 TSC_hg19_v1_chr1_+_100818053 AF064103 AK310657 AF000367	-367148	+	NM_001078 NM_001199834 NM_080682 TSC_hg19_v1_chr1_+_101185297 AK223266 AK291732 AK296692 BC068490 M30257 BC017276 BC085003 M60335 AB590609 EU831989 EU832082 X53051 CU686647	55	+	TSC_hg19_v1_chr1_-_101360249 BC014910	175016	-	TSC_hg19_v1_chr1_-_101360368 AK312895 AB009284 AF000416 AK096914 BC036015 AK298124 BC001649 BC001835 BC008722	175119	-	AK225748|GPR88|54112|G protein-coupled receptor 88##AB042410|GPR88|54112|G protein-coupled receptor 88##BC036775|GPR88|54112|G protein-coupled receptor 88##NM_022049|GPR88|54112|G protein-coupled receptor 88##BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_001078|VCAM1|7412|vascular cell adhesion molecule 1##NM_001199834|VCAM1|7412|vascular cell adhesion molecule 1##NM_080682|VCAM1|7412|vascular cell adhesion molecule 1##AK223266|VCAM1|7412|vascular cell adhesion molecule 1##AK291732|VCAM1|7412|vascular cell adhesion molecule 1##AK296692|VCAM1|7412|vascular cell adhesion molecule 1##BC068490|VCAM1|7412|vascular cell adhesion molecule 1##M30257|VCAM1|7412|vascular cell adhesion molecule 1##BC017276|VCAM1|7412|vascular cell adhesion molecule 1##BC085003|VCAM1|7412|vascular cell adhesion molecule 1##M60335|VCAM1|7412|vascular cell adhesion molecule 1##EU831989|VCAM1|7412|vascular cell adhesion molecule 1##EU832082|VCAM1|7412|vascular cell adhesion molecule 1##X53051|VCAM1|7412|vascular cell adhesion molecule 1##BC014910|EXTL2|2135|exostoses (multiple)-like 2##AK312895|EXTL2|2135|exostoses (multiple)-like 2##AB009284|EXTL2|2135|exostoses (multiple)-like 2##AF000416|EXTL2|2135|exostoses (multiple)-like 2##AK096914|EXTL2|2135|exostoses (multiple)-like 2##BC036015|EXTL2|2135|exostoses (multiple)-like 2##AK298124|EXTL2|2135|exostoses (multiple)-like 2	0.0	
chr11	36091528	36091634	reg1028965.p1	3.735	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	-125970	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-406908	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-407131	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	219372	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	219405	-	NM_001160167 AK055042	226199	+	BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9##NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like	0.0	
chr1	214982361	214982455	reg1036413.p1	3.735	+	TSC_hg19_v1_chr1_+_214776585 U30872	-205790	+	TSC_hg19_v1_chr1_+_214776547 NM_016343 U19769 AK307690	-205887	+	TSC_hg19_v1_chr1_-_214724977 NM_005401	-257410	-	NM_001017424	196476	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	274202	+	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	758455	+	U30872|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##NM_016343|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##U19769|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##AK307690|CENPF|1063|centromere protein F, 350/400kDa (mitosin)##NM_005401|PTPN14|5784|protein tyrosine phosphatase, non-receptor type 14##NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3	0.975407	CTCF.p2:-16:0.975
chr14	73689975	73690079	reg1031037.p2	3.735	+	AJ008005 TSC_hg19_v1_chr14_+_73603214	-86815	+	TSC_hg19_v1_chr14_+_73603184 L42110	-86847	+	TSC_hg19_v1_chr14_+_73603160 BC011729	-86867	+	NM_173462 TSC_hg19_v1_chr14_+_73704238 BC042057 BC136623 BC144315	14224	+	BX248775 TSC_hg19_v1_chr14_-_73925232 BX647137 AF171938 AF171939 AF171940 AF171941 BX248073 AF015040 AK315130 BC020788	235205	-	TSC_hg19_v1_chr14_-_73925274 BX248781	235240	-	AJ008005|PSEN1|5663|presenilin 1##L42110|PSEN1|5663|presenilin 1##BC011729|PSEN1|5663|presenilin 1##NM_173462|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BC042057|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BC136623|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BC144315|PAPLN|89932|papilin, proteoglycan-like sulfated glycoprotein##BX248775|NUMB|8650|numb homolog (Drosophila)##BX647137|NUMB|8650|numb homolog (Drosophila)##AF171938|NUMB|8650|numb homolog (Drosophila)##AF171939|NUMB|8650|numb homolog (Drosophila)##AF171940|NUMB|8650|numb homolog (Drosophila)##AF171941|NUMB|8650|numb homolog (Drosophila)##BX248073|NUMB|8650|numb homolog (Drosophila)##AF015040|NUMB|8650|numb homolog (Drosophila)##AK315130|NUMB|8650|numb homolog (Drosophila)##BC020788|NUMB|8650|numb homolog (Drosophila)##BX248781|NUMB|8650|numb homolog (Drosophila)	0.014015	
chr1	67808100	67808261	reg1026045.p2	3.735	+	AK294494 TSC_hg19_v1_chr1_+_67773565 AK316525	-34617	+	NM_001559 U64198 TSC_hg19_v1_chr1_+_67773087	-35099	+	AF461422 NM_144701	-176012	+	CR457383 AB527591 CU675982 CU676556 CU677990 CU693242 EU831446 EU831638 EU831722 EU832650 EU832728 TSC_hg19_v1_chr1_-_67896065 BC003049 AK130606 BC002488 BC008045 BC017449 BC020555 BC026916 BC019273 AL080119 AF151813	87843	-	TSC_hg19_v1_chr1_-_67896070 AK074970 AK222955 AK223138	87892	-	TSC_hg19_v1_chr1_-_67896086 AK312256	87905	-	AK294494|IL12RB2|3595|interleukin 12 receptor, beta 2##AK316525|IL12RB2|3595|interleukin 12 receptor, beta 2##NM_001559|IL12RB2|3595|interleukin 12 receptor, beta 2##U64198|IL12RB2|3595|interleukin 12 receptor, beta 2##AF461422|IL23R|149233|interleukin 23 receptor##NM_144701|IL23R|149233|interleukin 23 receptor##CR457383|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831446|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831638|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831722|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832650|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832728|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC003049|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK130606|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC002488|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC008045|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC017449|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC020555|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC026916|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC019273|SERBP1|26135|SERPINE1 mRNA binding protein 1##AL080119|SERBP1|26135|SERPINE1 mRNA binding protein 1##AF151813|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK074970|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK222955|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK223138|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK312256|SERBP1|26135|SERPINE1 mRNA binding protein 1	0.0	
chr16	8993665	8993790	reg1036369.p1	3.735	+	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	-30867	-	NM_001042476 BC001333	-31475	-	NM_000303 TSC_hg19_v1_chr16_+_8891675 AK296123 U85773 AK300785 AK291537 AK299979 AK311035 AK312532 AK304320 AK296630 BC008310	-102029	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	63568	-	TSC_hg19_v1_chr16_+_9185545 NM_014117	191813	+	TSC_hg19_v1_chr16_+_9185577 BC113570	191876	+	BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_000303|PMM2|5373|phosphomannomutase 2##U85773|PMM2|5373|phosphomannomutase 2##AK300785|PMM2|5373|phosphomannomutase 2##AK291537|PMM2|5373|phosphomannomutase 2##AK299979|PMM2|5373|phosphomannomutase 2##AK311035|PMM2|5373|phosphomannomutase 2##AK312532|PMM2|5373|phosphomannomutase 2##AK304320|PMM2|5373|phosphomannomutase 2##AK296630|PMM2|5373|phosphomannomutase 2##BC008310|PMM2|5373|phosphomannomutase 2##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##BC113570|C16orf72|29035|chromosome 16 open reading frame 72	0.011908	
chr1	895850	895956	reg1035255.p1	3.735	+	BC003555 TSC_hg19_v1_chr1_-_894655 NM_015658	-1239	-	TSC_hg19_v1_chr1_-_894646 AK315080	-1258	-	AB463150 AM393843 CU678496 TSC_hg19_v1_chr1_-_894632 AL050019 AK024284 AK225239 BC009786	-1275	-	TSC_hg19_v1_chr1_+_895963 AK127585 AY423763 NM_198317 BC105742	84	+	AL136730 NM_001160184 NM_032129 BC101386 BC101387 AB463180 AM393848 BC141658	5989	+	AB048791 DQ895490 TSC_hg19_v1_chr1_-_935444	39495	-	BC003555|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##NM_015658|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK315080|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AM393843|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AL050019|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK024284|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK225239|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##BC009786|NOC2L|26155|nucleolar complex associated 2 homolog (S. cerevisiae)##AK127585|KLHL17|339451|kelch-like 17 (Drosophila)##AY423763|KLHL17|339451|kelch-like 17 (Drosophila)##NM_198317|KLHL17|339451|kelch-like 17 (Drosophila)##BC105742|KLHL17|339451|kelch-like 17 (Drosophila)##AL136730|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##NM_001160184|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##NM_032129|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC101386|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC101387|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##AM393848|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##BC141658|PLEKHN1|84069|pleckstrin homology domain containing, family N member 1##AB048791|HES4|57801|hairy and enhancer of split 4 (Drosophila)##DQ895490|HES4|57801|hairy and enhancer of split 4 (Drosophila)	0.0	
chr21	35389869	35390049	reg1036566.p1	3.735	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-101867	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-199289	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-375104	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	55882	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	55970	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	346387	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.0	
chr6	143141186	143141367	reg1035940.p2	3.735	+	TSC_hg19_v1_chr6_+_142623443 BX640873	-517870	+	TSC_hg19_v1_chr6_+_142623145 BC075798 NM_001032394 NM_001032395 NM_020455 NM_198569 AF216967 AB183546 AB183547 AB183548 AB183549 AK307543 AK122617 BX648315	-518207	+	TSC_hg19_v1_chr6_+_142510627 BC013217	-630647	+	TSC_hg19_v1_chr6_-_143266314 CR936782 NM_006734	125052	-	TSC_hg19_v1_chr6_+_143382007 AK298533 AK222475 NM_016108	240719	+	BC009559 TSC_hg19_v1_chr6_+_143382031 AF153605 AK001347 BX640703	240760	+	BX640873|GPR126|57211|G protein-coupled receptor 126##BC075798|GPR126|57211|G protein-coupled receptor 126##NM_001032394|GPR126|57211|G protein-coupled receptor 126##NM_001032395|GPR126|57211|G protein-coupled receptor 126##NM_020455|GPR126|57211|G protein-coupled receptor 126##NM_198569|GPR126|57211|G protein-coupled receptor 126##AF216967|GPR126|57211|G protein-coupled receptor 126##AB183546|GPR126|57211|G protein-coupled receptor 126##AB183547|GPR126|57211|G protein-coupled receptor 126##AB183548|GPR126|57211|G protein-coupled receptor 126##AB183549|GPR126|57211|G protein-coupled receptor 126##AK307543|GPR126|57211|G protein-coupled receptor 126##AK122617|GPR126|57211|G protein-coupled receptor 126##BX648315|GPR126|57211|G protein-coupled receptor 126##BC013217|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##CR936782|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##NM_006734|HIVEP2|3097|human immunodeficiency virus type I enhancer binding protein 2##AK298533|AIG1|51390|androgen-induced 1##AK222475|AIG1|51390|androgen-induced 1##NM_016108|AIG1|51390|androgen-induced 1##BC009559|AIG1|51390|androgen-induced 1##AF153605|AIG1|51390|androgen-induced 1##AK001347|AIG1|51390|androgen-induced 1##BX640703|AIG1|51390|androgen-induced 1	0.0	
chr10	38264264	38264445	reg1042791.p1	3.734	+	BC146820 TSC_hg19_v1_chr10_-_38147013 AK299357	-117355	-	BC132915 BC132917 BC110869 BC021819 AJ491695 AJ492196 NM_021045 TSC_hg19_v1_chr10_-_38146539	-117936	-	NM_001190489	-372496	-	AJ491696 NM_145011 TSC_hg19_v1_chr10_-_38265576 AK122958 BC036038 AK056452 AX721125	1173	-	TSC_hg19_v1_chr10_+_38299631 NM_006954 NM_006974 AK303445 AK292844 BC017760 AK027057 D31763	35241	+	TSC_hg19_v1_chr10_+_38383292 NM_001007094 NM_001178101 NM_003421 AK092012 AX747310 BX647089 AJ492195 BC015858	118929	+	BC146820|ZNF248|57209|zinc finger protein 248##AK299357|ZNF248|57209|zinc finger protein 248##BC132915|ZNF248|57209|zinc finger protein 248##BC132917|ZNF248|57209|zinc finger protein 248##BC110869|ZNF248|57209|zinc finger protein 248##BC021819|ZNF248|57209|zinc finger protein 248##AJ491695|ZNF248|57209|zinc finger protein 248##AJ492196|ZNF248|57209|zinc finger protein 248##NM_021045|ZNF248|57209|zinc finger protein 248##NM_001190489|MTRNR2L7|100288485|MT-RNR2-like 7##AJ491696|ZNF25|219749|zinc finger protein 25##NM_145011|ZNF25|219749|zinc finger protein 25##AK122958|ZNF25|219749|zinc finger protein 25##BC036038|ZNF25|219749|zinc finger protein 25##AK056452|ZNF25|219749|zinc finger protein 25##NM_006954|ZNF33A|7581|zinc finger protein 33A##NM_006974|ZNF33A|7581|zinc finger protein 33A##AK303445|ZNF33A|7581|zinc finger protein 33A##AK292844|ZNF33A|7581|zinc finger protein 33A##BC017760|ZNF33A|7581|zinc finger protein 33A##AK027057|ZNF33A|7581|zinc finger protein 33A##D31763|ZNF33A|7581|zinc finger protein 33A##NM_001007094|ZNF37A|7587|zinc finger protein 37A##NM_001178101|ZNF37A|7587|zinc finger protein 37A##NM_003421|ZNF37A|7587|zinc finger protein 37A##AK092012|ZNF37A|7587|zinc finger protein 37A##BX647089|ZNF37A|7587|zinc finger protein 37A##AJ492195|ZNF37A|7587|zinc finger protein 37A##BC015858|ZNF37A|7587|zinc finger protein 37A	0.0	
chr10	71209673	71209825	reg1038006.p2	3.734	+	AK300649 BC033742 AK291996 NM_001057	-33129	-	TSC_hg19_v1_chr10_+_71078629 BC008730 DQ893281 DQ896762 CU679065 AB384968	-131084	+	AK309904 TSC_hg19_v1_chr10_+_71078627	-131122	+	TSC_hg19_v1_chr10_+_71211220 NM_012339 BC003157 BC004161 AF120266	1512	+	TSC_hg19_v1_chr10_+_71211325 AB529132 CU678410	1584	+	BC074938 BC074939 BC117488 BC126468 BC069098 AK313952 NM_020999	123351	-	AK300649|TACR2|6865|tachykinin receptor 2##BC033742|TACR2|6865|tachykinin receptor 2##AK291996|TACR2|6865|tachykinin receptor 2##NM_001057|TACR2|6865|tachykinin receptor 2##BC008730|HK1|3098|hexokinase 1##DQ893281|HK1|3098|hexokinase 1##DQ896762|HK1|3098|hexokinase 1##AK309904|HK1|3098|hexokinase 1##NM_012339|TSPAN15|23555|tetraspanin 15##BC003157|TSPAN15|23555|tetraspanin 15##BC004161|TSPAN15|23555|tetraspanin 15##AF120266|TSPAN15|23555|tetraspanin 15##BC074938|NEUROG3|50674|neurogenin 3##BC074939|NEUROG3|50674|neurogenin 3##BC117488|NEUROG3|50674|neurogenin 3##BC126468|NEUROG3|50674|neurogenin 3##BC069098|NEUROG3|50674|neurogenin 3##AK313952|NEUROG3|50674|neurogenin 3##NM_020999|NEUROG3|50674|neurogenin 3	0.0	
chr10	89878098	89878208	reg1033232.p2	3.734	+	TSC_hg19_v1_chr10_+_89623420 U96180	-254726	+	TSC_hg19_v1_chr10_+_89623380 BC005821	-254764	+	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	-254927	+	CU675143 BC005364 AK002080 AK296262 NM_001031709 NM_018363	464861	-	BC042900 BC031219 NM_001010939	468360	+	NM_001198828 NM_001198829 NM_001198830 NM_004190 AK301310 AK301320 AK308224 AK310128 AK312940 AK223468 AL833751 X05997	546027	+	U96180|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005364|RNLS|55328|renalase, FAD-dependent amine oxidase##AK002080|RNLS|55328|renalase, FAD-dependent amine oxidase##AK296262|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_001031709|RNLS|55328|renalase, FAD-dependent amine oxidase##NM_018363|RNLS|55328|renalase, FAD-dependent amine oxidase##BC042900|LIPJ|142910|lipase, family member J##BC031219|LIPJ|142910|lipase, family member J##NM_001010939|LIPJ|142910|lipase, family member J##NM_001198828|LIPF|8513|lipase, gastric##NM_001198829|LIPF|8513|lipase, gastric##NM_001198830|LIPF|8513|lipase, gastric##NM_004190|LIPF|8513|lipase, gastric##AK301310|LIPF|8513|lipase, gastric##AK301320|LIPF|8513|lipase, gastric##AK308224|LIPF|8513|lipase, gastric##AK310128|LIPF|8513|lipase, gastric##AK312940|LIPF|8513|lipase, gastric##AK223468|LIPF|8513|lipase, gastric##AL833751|LIPF|8513|lipase, gastric##X05997|LIPF|8513|lipase, gastric	0.0	
chr12	121916743	121916853	reg1020886.p1	3.734	+	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	-11724	-	AF306709 TSC_hg19_v1_chr12_+_121837931 NM_025126 NM_194271 AK025439 AK225285 AK304366 BC007826 BC039029 BC046174 BC029038	-78834	+	AK025614 NM_001137559	-124787	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	101461	-	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	102116	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	147845	+	BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##AF306709|RNF34|80196|ring finger protein 34##NM_025126|RNF34|80196|ring finger protein 34##NM_194271|RNF34|80196|ring finger protein 34##AK025439|RNF34|80196|ring finger protein 34##AK225285|RNF34|80196|ring finger protein 34##BC007826|RNF34|80196|ring finger protein 34##BC039029|RNF34|80196|ring finger protein 34##BC046174|RNF34|80196|ring finger protein 34##AK025614|ANAPC5|51433|anaphase promoting complex subunit 5##NM_001137559|ANAPC5|51433|anaphase promoting complex subunit 5##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1	0.0	
chr16	29690603	29690674	reg1032588.p1	3.734	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-156	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-244	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-15624	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	66663	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	98948	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	111413	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.0	
chr16	32909206	32909292	reg1017474.p1	3.734	+	AK300387 TSC_hg19_v1_chr16_+_32752635	-156613	+	AL133588 NM_016212	-221197	-	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	-221816	-	AL133588 NM_016212	295730	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	296349	+	AL133588 NM_016212	352265	+	AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3	4.206896	CTCF.p2:-7:0.944	CTCF.p2:31:0.978	CTCF.p2:72:0.997	CTCF.p2:-105:0.987
chr17	11946227	11946293	reg1042386.p1	3.734	+	TSC_hg19_v1_chr17_+_11924150 BC036032 NM_003010 BC060764 AK131544 AK313053 U17743 AK294923 L36870 BC050386 AB590846 BT019676 CR536564	-22079	+	AK092656 AX747657 NM_144680 TSC_hg19_v1_chr17_-_11900782 AY491053 AK127908	-45507	-	NM_004662 X99947	-160040	+	NM_001146312 NM_153604 TSC_hg19_v1_chr17_+_12569210 AY764180	622949	+	AK128608 TSC_hg19_v1_chr17_+_12569334 AK292885	623061	+	TSC_hg19_v1_chr17_+_12569389 BC126307 BC143391 AF532596	623174	+	BC036032|MAP2K4|6416|mitogen-activated protein kinase kinase 4##NM_003010|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC060764|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK131544|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK313053|MAP2K4|6416|mitogen-activated protein kinase kinase 4##U17743|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK294923|MAP2K4|6416|mitogen-activated protein kinase kinase 4##L36870|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BC050386|MAP2K4|6416|mitogen-activated protein kinase kinase 4##BT019676|MAP2K4|6416|mitogen-activated protein kinase kinase 4##CR536564|MAP2K4|6416|mitogen-activated protein kinase kinase 4##AK092656|ZNF18|7566|zinc finger protein 18##NM_144680|ZNF18|7566|zinc finger protein 18##AY491053|ZNF18|7566|zinc finger protein 18##AK127908|ZNF18|7566|zinc finger protein 18##NM_004662|DNAH9|1770|dynein, axonemal, heavy chain 9##X99947|DNAH9|1770|dynein, axonemal, heavy chain 9##NM_001146312|MYOCD|93649|myocardin##NM_153604|MYOCD|93649|myocardin##AY764180|MYOCD|93649|myocardin##AK128608|MYOCD|93649|myocardin##AK292885|MYOCD|93649|myocardin##BC126307|MYOCD|93649|myocardin##BC143391|MYOCD|93649|myocardin##AF532596|MYOCD|93649|myocardin	0.0	
chr19	12404703	12404807	reg1028077.p2	3.734	+	TSC_hg19_v1_chr19_+_12305871 AK093188 AX721123	-98849	+	AK023304 TSC_hg19_v1_chr19_+_12305836	-98922	+	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	-130846	+	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	897	-	AK313755 BC022523 AK092116 AX747362 NM_145276	39729	-	AK024418 AK295923 NM_030824	71705	-	AK023304|LOC100289333|100289333|uncharacterized LOC100289333##NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136##BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44##AK313755|ZNF563|147837|zinc finger protein 563##BC022523|ZNF563|147837|zinc finger protein 563##AK092116|ZNF563|147837|zinc finger protein 563##NM_145276|ZNF563|147837|zinc finger protein 563##AK024418|ZNF442|79973|zinc finger protein 442##AK295923|ZNF442|79973|zinc finger protein 442##NM_030824|ZNF442|79973|zinc finger protein 442	0.0	
chr19	13265983	13266076	reg1037648.p1	3.734	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-1849	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-4737	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-4890	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	351147	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	576550	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	592690	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.0	
chr19	55591545	55591627	reg1037070.p1	3.734	+	AK309305 NM_133180 AF370395 AK075098 AK296732	-4341	+	BC009881 NM_138412	-10682	-	BC069002 AK291579 AY358473 TSC_hg19_v1_chr19_-_55574501 AK075392 NM_001145971	-17077	-	AK000265 AK301615 NM_017729 BC015763 CU677435	223	+	AB209452 TSC_hg19_v1_chr19_-_55629006 AF312028 NM_017607	37346	-	TSC_hg19_v1_chr19_-_55658311 AY762903 AY762904 BT019630 S51938	66831	-	AK309305|EPS8L1|54869|EPS8-like 1##NM_133180|EPS8L1|54869|EPS8-like 1##AF370395|EPS8L1|54869|EPS8-like 1##AK075098|EPS8L1|54869|EPS8-like 1##AK296732|EPS8L1|54869|EPS8-like 1##BC009881|RDH13|112724|retinol dehydrogenase 13 (all-trans/9-cis)##NM_138412|RDH13|112724|retinol dehydrogenase 13 (all-trans/9-cis)##BC069002|RDH13|112724|retinol dehydrogenase 13 (all-trans/9-cis)##AK291579|RDH13|112724|retinol dehydrogenase 13 (all-trans/9-cis)##AY358473|RDH13|112724|retinol dehydrogenase 13 (all-trans/9-cis)##AK075392|RDH13|112724|retinol dehydrogenase 13 (all-trans/9-cis)##NM_001145971|RDH13|112724|retinol dehydrogenase 13 (all-trans/9-cis)##AK000265|EPS8L1|54869|EPS8-like 1##AK301615|EPS8L1|54869|EPS8-like 1##NM_017729|EPS8L1|54869|EPS8-like 1##BC015763|EPS8L1|54869|EPS8-like 1##AB209452|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##AF312028|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##NM_017607|PPP1R12C|54776|protein phosphatase 1, regulatory subunit 12C##AY762903|TNNT1|7138|troponin T type 1 (skeletal, slow)##AY762904|TNNT1|7138|troponin T type 1 (skeletal, slow)##BT019630|TNNT1|7138|troponin T type 1 (skeletal, slow)##S51938|TNNT1|7138|troponin T type 1 (skeletal, slow)	0.0	
chr2	24583767	24583834	reg1033311.p2	3.734	+	TSC_hg19_v1_chr2_-_24583385 AB033082 BC146779 AF182198 AF182199 BC038963 NM_006277 NM_019595 NM_147152	-320	-	BC050462 NM_001040710	-185829	+	TSC_hg19_v1_chr2_+_24346339 NM_001145710	-237441	+	NM_003743 NM_147223 NM_147233 AJ000881 AJ000882 U59302	223577	+	TSC_hg19_v1_chr2_-_25016225 CU687260 BC073803 NM_001013663	432438	-	NM_001199803 AK027859 TSC_hg19_v1_chr2_+_25016332 NM_024322 BC002870 AK315483	432471	+	AB033082|ITSN2|50618|intersectin 2##BC146779|ITSN2|50618|intersectin 2##AF182198|ITSN2|50618|intersectin 2##AF182199|ITSN2|50618|intersectin 2##BC038963|ITSN2|50618|intersectin 2##NM_006277|ITSN2|50618|intersectin 2##NM_019595|ITSN2|50618|intersectin 2##NM_147152|ITSN2|50618|intersectin 2##BC050462|C2orf84|653140|chromosome 2 open reading frame 84##NM_001040710|C2orf84|653140|chromosome 2 open reading frame 84##NM_001145710|LOC375190|375190|UPF0638 protein B##NM_003743|NCOA1|8648|nuclear receptor coactivator 1##NM_147223|NCOA1|8648|nuclear receptor coactivator 1##NM_147233|NCOA1|8648|nuclear receptor coactivator 1##AJ000881|NCOA1|8648|nuclear receptor coactivator 1##AJ000882|NCOA1|8648|nuclear receptor coactivator 1##U59302|NCOA1|8648|nuclear receptor coactivator 1##BC073803|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001013663|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001199803|CENPO|79172|centromere protein O##AK027859|CENPO|79172|centromere protein O##NM_024322|CENPO|79172|centromere protein O##BC002870|CENPO|79172|centromere protein O##AK315483|CENPO|79172|centromere protein O	0.0	
chr3	136978650	136978758	reg1042261.p2	3.734	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-301874	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-329367	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	-397612	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	504443	+	AK098474 NM_001002026 AF349452	738975	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	750299	+	AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18	0.0	
chr5	31581931	31582111	reg1004434.p2	3.734	+	NM_018356 TSC_hg19_v1_chr5_+_31532398 BC032845 AK299156 AK002055 BC021215 AB527598	-49586	+	TSC_hg19_v1_chr5_-_31532201 AK308093 AF189011 BC054003 BX647724 NM_001100412 NM_013235	-49799	-	TSC_hg19_v1_chr5_+_31193875 BC000019 AK024238	-388144	+	TSC_hg19_v1_chr5_+_31639424 AB002298	57449	+	NM_178140	217009	+	TSC_hg19_v1_chr5_+_32173523 AK055939	591495	+	NM_018356|C5orf22|55322|chromosome 5 open reading frame 22##BC032845|C5orf22|55322|chromosome 5 open reading frame 22##AK299156|C5orf22|55322|chromosome 5 open reading frame 22##AK002055|C5orf22|55322|chromosome 5 open reading frame 22##BC021215|C5orf22|55322|chromosome 5 open reading frame 22##AK308093|DROSHA|29102|drosha, ribonuclease type III##AF189011|DROSHA|29102|drosha, ribonuclease type III##BC054003|DROSHA|29102|drosha, ribonuclease type III##BX647724|DROSHA|29102|drosha, ribonuclease type III##NM_001100412|DROSHA|29102|drosha, ribonuclease type III##NM_013235|DROSHA|29102|drosha, ribonuclease type III##BC000019|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AK024238|CDH6|1004|cadherin 6, type 2, K-cadherin (fetal kidney)##AB002298|PDZD2|23037|PDZ domain containing 2##NM_178140|PDZD2|23037|PDZ domain containing 2##AK055939|LOC153546|153546|uncharacterized LOC153546	0.0	
chr7	101929774	101929892	reg1034552.p2	3.734	+	TSC_hg19_v1_chr7_+_101928431 AB000520	-1390	+	TSC_hg19_v1_chr7_+_101928390 NM_020979	-1436	+	M74099 NM_181552	-468952	+	NM_001146210	67055	-	TSC_hg19_v1_chr7_+_102004329 NM_001242713 BC063572 AK098276	74478	+	TSC_hg19_v1_chr7_+_102004338 BC048257 BC066362	74519	+	AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_020979|SH2B2|10603|SH2B adaptor protein 2##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)##NM_001242713|LOC100289561|100289561|uncharacterized LOC100289561##BC063572|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough##AK098276|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough	0.0	
chr9	102130974	102131065	reg1026606.p2	3.734	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-146432	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-146776	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-146802	-	TSC_hg19_v1_chr9_-_102582187 AK057451	451146	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	453138	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	537908	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.0	
chr10	126727402	126727519	reg1031153.p1	3.733	+	AF222711 NM_022802	-11008	-	NM_017580	-96769	+	NM_032182 TSC_hg19_v1_chr10_+_126490387 AK296677 D63877 BC008999	-237088	+	TSC_hg19_v1_chr10_-_126849010 AF016507 BC072020	121566	-	BC052276 AL833398 BC002486 TSC_hg19_v1_chr10_-_126849101 NM_001329	121656	-	TSC_hg19_v1_chr10_-_126849600 BC047018 NM_001083914	122133	-	AF222711|CTBP2|1488|C-terminal binding protein 2##NM_022802|CTBP2|1488|C-terminal binding protein 2##NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1##NM_032182|FAM175B|23172|family with sequence similarity 175, member B##AK296677|FAM175B|23172|family with sequence similarity 175, member B##D63877|FAM175B|23172|family with sequence similarity 175, member B##BC008999|FAM175B|23172|family with sequence similarity 175, member B##AF016507|CTBP2|1488|C-terminal binding protein 2##BC072020|CTBP2|1488|C-terminal binding protein 2##BC052276|CTBP2|1488|C-terminal binding protein 2##AL833398|CTBP2|1488|C-terminal binding protein 2##BC002486|CTBP2|1488|C-terminal binding protein 2##NM_001329|CTBP2|1488|C-terminal binding protein 2##BC047018|CTBP2|1488|C-terminal binding protein 2##NM_001083914|CTBP2|1488|C-terminal binding protein 2	0.974446	CTCF.p2:-37:0.974
chr11	41197270	41197355	reg1036069.p2	3.733	+	AB046800 NM_020929	-881649	-	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	-882718	-	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-4577510	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	2136206	+	TSC_hg19_v1_chr11_+_43333545 AK299288 AK304157 AK294724 Y15906 AF229254 AY311389 U83857 BC017709	2136252	+	AK293303 TSC_hg19_v1_chr11_+_43333603 DQ890671 DQ893852 BT007093	2136328	+	AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5##AK299288|API5|8539|apoptosis inhibitor 5##AK304157|API5|8539|apoptosis inhibitor 5##AK294724|API5|8539|apoptosis inhibitor 5##Y15906|API5|8539|apoptosis inhibitor 5##AF229254|API5|8539|apoptosis inhibitor 5##AY311389|API5|8539|apoptosis inhibitor 5##U83857|API5|8539|apoptosis inhibitor 5##BC017709|API5|8539|apoptosis inhibitor 5##AK293303|API5|8539|apoptosis inhibitor 5##DQ890671|API5|8539|apoptosis inhibitor 5##DQ893852|API5|8539|apoptosis inhibitor 5##BT007093|API5|8539|apoptosis inhibitor 5	0.0	
chr1	153895738	153895918	reg1040148.p1	3.733	+	AK094665 NM_020699 TSC_hg19_v1_chr1_-_153895452	-377	-	BC003041 BC009916 NM_024330 AK075377 TSC_hg19_v1_chr1_+_153747897 AK123997 AY358409 AK074134 DQ893429 DQ895951 AK027499 BC029792	-147962	+	TSC_hg19_v1_chr1_+_153700548 BX640950 CR749376 CR627233 BC116458 AK290025 CR749212 BX640786 NM_023015	-195275	+	TSC_hg19_v1_chr1_-_153919148 AB007945 NM_014856	23318	-	AY726597 AK096382 BC053562 TSC_hg19_v1_chr1_-_153931074 AF289574	35165	-	TSC_hg19_v1_chr1_-_153931089 AK223559	35256	-	AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B##NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B##BC003041|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC009916|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##NM_024330|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK075377|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK123997|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AY358409|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK074134|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ893429|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ895951|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK027499|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC029792|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BX640950|INTS3|65123|integrator complex subunit 3##CR749376|INTS3|65123|integrator complex subunit 3##CR627233|INTS3|65123|integrator complex subunit 3##BC116458|INTS3|65123|integrator complex subunit 3##AK290025|INTS3|65123|integrator complex subunit 3##CR749212|INTS3|65123|integrator complex subunit 3##BX640786|INTS3|65123|integrator complex subunit 3##NM_023015|INTS3|65123|integrator complex subunit 3##AB007945|DENND4B|9909|DENN/MADD domain containing 4B##NM_014856|DENND4B|9909|DENN/MADD domain containing 4B##AY726597|CRTC2|200186|CREB regulated transcription coactivator 2##AK096382|CRTC2|200186|CREB regulated transcription coactivator 2##BC053562|CRTC2|200186|CREB regulated transcription coactivator 2##AF289574|CRTC2|200186|CREB regulated transcription coactivator 2##AK223559|CRTC2|200186|CREB regulated transcription coactivator 2	0.0	
chr12	123478155	123478335	reg1035109.p2	3.733	+	AB040953 TSC_hg19_v1_chr12_-_123466210	-12013	-	TSC_hg19_v1_chr12_+_123465384 AK027285	-12829	+	EU624491 AF267748 TSC_hg19_v1_chr12_+_123465249 AB035384 AK315759 BC001958 BC015569	-13080	+	BC141813 TSC_hg19_v1_chr12_-_123590060	111810	-	NM_020845	116729	-	AB040890 TSC_hg19_v1_chr12_-_123635595	157253	-	AB040953|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##AK027285|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##EU624491|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##AF267748|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##AB035384|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##AK315759|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##BC001958|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##BC015569|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##BC141813|PITPNM2|57605|phosphatidylinositol transfer protein, membrane-associated 2##NM_020845|PITPNM2|57605|phosphatidylinositol transfer protein, membrane-associated 2##AB040890|PITPNM2|57605|phosphatidylinositol transfer protein, membrane-associated 2	0.0	
chr12	47071644	47071776	reg1030851.p1	3.733	+	TSC_hg19_v1_chr12_-_46766619 NM_018976	-305107	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-305421	-	NM_001077484 NM_030674	-408503	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	148046	-	TSC_hg19_v1_chr12_+_47473404 BC072670	401687	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	401873	-	NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2	0.514632	CTCF.p2:49:0.515
chr12	49208641	49208781	reg1016053.p2	3.733	+	TSC_hg19_v1_chr12_+_49208615 AK122911	-66	+	NM_001206917 AK304537 AK300901	-473	+	TSC_hg19_v1_chr12_-_49182812 AB007882 NM_020983 BC064923	-25903	-	TSC_hg19_v1_chr12_+_49209373 NM_001206916 AK297639 AK316323	625	+	NM_000725 NM_001206915 TSC_hg19_v1_chr12_+_49212307	3572	+	AF026402 BC002366 TSC_hg19_v1_chr12_-_49245925 AK294877 AK312379 AK128428 AK292921 NM_004818	37221	-	AK122911|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_001206917|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK304537|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK300901|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AB007882|ADCY6|112|adenylate cyclase 6##NM_020983|ADCY6|112|adenylate cyclase 6##BC064923|ADCY6|112|adenylate cyclase 6##NM_001206916|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK297639|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AK316323|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_001206915|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##AF026402|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##BC002366|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK294877|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK312379|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK128428|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK292921|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##NM_004818|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23	0.993075	
chr12	53591598	53591687	reg1033624.p2	3.733	+	TSC_hg19_v1_chr12_-_53575136 AK296885	-16511	-	AK289659 BC052249 NM_001244705	-16951	-	TSC_hg19_v1_chr12_+_53574527 BC053557 NM_001004304	-17090	+	M68892 NM_000889 S80335 TSC_hg19_v1_chr12_-_53601036 AK298239 AK301523 AK311703	9380	-	TSC_hg19_v1_chr12_-_53601066 AK300960	9430	-	HQ692829 TSC_hg19_v1_chr12_-_53613945 AK316259 M32074 AK297801	22320	-	AK296885|CSAD|51380|cysteine sulfinic acid decarboxylase##AK289659|CSAD|51380|cysteine sulfinic acid decarboxylase##BC052249|CSAD|51380|cysteine sulfinic acid decarboxylase##NM_001244705|CSAD|51380|cysteine sulfinic acid decarboxylase##BC053557|ZNF740|283337|zinc finger protein 740##NM_001004304|ZNF740|283337|zinc finger protein 740##M68892|ITGB7|3695|integrin, beta 7##NM_000889|ITGB7|3695|integrin, beta 7##S80335|ITGB7|3695|integrin, beta 7##AK298239|ITGB7|3695|integrin, beta 7##AK301523|ITGB7|3695|integrin, beta 7##AK311703|ITGB7|3695|integrin, beta 7##AK300960|ITGB7|3695|integrin, beta 7##HQ692829|RARG|5916|retinoic acid receptor, gamma##AK316259|RARG|5916|retinoic acid receptor, gamma##M32074|RARG|5916|retinoic acid receptor, gamma##AK297801|RARG|5916|retinoic acid receptor, gamma	0.913311	CTCF.p2:-13:0.844
chr1	37774315	37774415	reg1028376.p1	3.733	+	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	-274590	-	NM_000760 NM_156039 NM_172313	-825451	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-825881	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	165732	+	TSC_hg19_v1_chr1_+_37940140 AK026884	165785	+	FJ695517 TSC_hg19_v1_chr1_+_37940180 AK093343 AX748065 BC005001	165822	+	AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A##FJ695517|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK093343|ZC3H12A|80149|zinc finger CCCH-type containing 12A##BC005001|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.07164	
chr14	66291353	66291534	reg1001811.p1	3.733	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-411718	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-411955	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-412117	-	AB037806 AF272663 NM_001024218 NM_020806	682681	+	TSC_hg19_v1_chr14_+_66974859 AK025169	683410	+	TSC_hg19_v1_chr14_+_66974870 AK315569	683426	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.0	
chr15	55572071	55572158	reg1034142.p1	3.733	+	BC132800 BC136423 BC107680 NM_183236	-9016	-	AF125393 NM_183234 U57094 U38654 NM_004580	-9577	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	-82935	-	TSC_hg19_v1_chr15_-_55582012 AK312836 NM_183235	9877	-	NM_004855 AK293666 AK314706 BC017711	39049	+	TSC_hg19_v1_chr15_-_55611322 AB593170	39226	-	BC132800|RAB27A|5873|RAB27A, member RAS oncogene family##BC136423|RAB27A|5873|RAB27A, member RAS oncogene family##BC107680|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183236|RAB27A|5873|RAB27A, member RAS oncogene family##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1##AK312836|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183235|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004855|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK293666|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK314706|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##BC017711|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B	0.0	
chr17	9458245	9458336	reg1041442.p1	3.733	+	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	-533323	+	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	-589309	-	AY725853 AF128881 NM_014308	-642474	-	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	20841	-	TSC_hg19_v1_chr17_-_9479156 BC009713 AF062077 AF115323 NM_004853	20916	-	NM_001080556 NM_145054 AK074435 AB065281 BC025392 AK094847 AK315679 CU692990	21687	+	NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8##BC009713|STX8|9482|syntaxin 8##AF062077|STX8|9482|syntaxin 8##AF115323|STX8|9482|syntaxin 8##NM_004853|STX8|9482|syntaxin 8##NM_001080556|WDR16|146845|WD repeat domain 16##NM_145054|WDR16|146845|WD repeat domain 16##AK074435|WDR16|146845|WD repeat domain 16##AB065281|WDR16|146845|WD repeat domain 16##BC025392|WDR16|146845|WD repeat domain 16##AK094847|WDR16|146845|WD repeat domain 16##AK315679|WDR16|146845|WD repeat domain 16	0.021977	
chr19	3126219	3126400	reg1013470.p2	3.733	+	TSC_hg19_v1_chr19_+_3122573 BC051315 CU674752	-3704	+	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	-3916	+	TSC_hg19_v1_chr19_+_3094528 BC096225 BC096226 BC096227 AB463701 AF011497 AF493900 CR457004 AB209435	-31718	+	TSC_hg19_v1_chr19_+_3136030 GU727645 NM_002068 M63904 AK300481 AK291329 BC013585 GU727637	9835	+	NM_003775 TSC_hg19_v1_chr19_+_3178766 BC014970 AJ000479	52443	+	TSC_hg19_v1_chr19_+_3185896 NM_020170	59569	+	BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096225|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096226|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096227|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF011497|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF493900|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##CR457004|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AB209435|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##GU727645|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_002068|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##M63904|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK300481|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK291329|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC013585|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##GU727637|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_003775|S1PR4|8698|sphingosine-1-phosphate receptor 4##BC014970|S1PR4|8698|sphingosine-1-phosphate receptor 4##AJ000479|S1PR4|8698|sphingosine-1-phosphate receptor 4##NM_020170|NCLN|56926|nicalin	0.648903	CTCF.p2:46:0.649
chr20	48955601	48955687	reg1043942.p2	3.733	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	-148014	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	-148263	+	NM_005194 TSC_hg19_v1_chr20_+_48807197	-148451	+	TSC_hg19_v1_chr20_+_49126895 AK290638 NM_002827	171232	+	TSC_hg19_v1_chr20_+_49126916 AK316563	171269	+	AK299830 TSC_hg19_v1_chr20_+_49126919	171275	+	EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK290638|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##NM_002827|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK316563|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1	0.0	
chr5	158202424	158202562	reg1031737.p1	3.733	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-916403	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-1018113	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-1031753	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	323964	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	324249	-	AK304228 NM_001199382	432155	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.146997	
chr6	11375007	11375137	reg1021614.p2	3.733	+	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-142162	-	L43821 TSC_hg19_v1_chr6_-_11232900	-142172	-	U64317 BC020686 TSC_hg19_v1_chr6_-_11232894 BC050740 BC040207	-142181	-	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	7468	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	163426	+	NM_001143948 NM_032744	404207	-	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105	0.0	
chr8	103876788	103876886	reg1028727.p2	3.733	+	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	-442	-	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	-478	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	-208905	-	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	156430	+	TSC_hg19_v1_chr8_+_104033310 AK308632 BC010960 X69151 AK000064	156483	+	TSC_hg19_v1_chr8_+_104152984 NM_001024372 NM_024812 BC035038 AK022077 BC011517 AK093819 AF371319 AF371323 DQ893318 DQ896633	276163	+	BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK308632|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC010960|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##X69151|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK000064|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##NM_001024372|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_024812|BAALC|79870|brain and acute leukemia, cytoplasmic##BC035038|BAALC|79870|brain and acute leukemia, cytoplasmic##AK022077|BAALC|79870|brain and acute leukemia, cytoplasmic##BC011517|BAALC|79870|brain and acute leukemia, cytoplasmic##AK093819|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371319|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371323|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ893318|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ896633|BAALC|79870|brain and acute leukemia, cytoplasmic	0.0	
chr11	71713291	71713357	reg1045282.p1	3.732	+	AF110799 AF110800 NM_001145055 AB590783 CU692186 AB019504	-2324	+	NM_001145057 AF122906	-2649	+	TSC_hg19_v1_chr11_+_71709954 NM_001039659 NM_001039660 NM_173044 AF215907 BC044215 AF110801 NM_005699 NM_173042	-3295	+	TSC_hg19_v1_chr11_-_71746967 AB463147	33653	-	TSC_hg19_v1_chr11_-_71752156 AK290509 AK309041	38819	-	TSC_hg19_v1_chr11_-_71781122 BC036808	67790	-	AF110799|IL18BP|10068|interleukin 18 binding protein##AF110800|IL18BP|10068|interleukin 18 binding protein##NM_001145055|IL18BP|10068|interleukin 18 binding protein##AB019504|IL18BP|10068|interleukin 18 binding protein##NM_001145057|IL18BP|10068|interleukin 18 binding protein##AF122906|IL18BP|10068|interleukin 18 binding protein##NM_001039659|IL18BP|10068|interleukin 18 binding protein##NM_001039660|IL18BP|10068|interleukin 18 binding protein##NM_173044|IL18BP|10068|interleukin 18 binding protein##AF215907|IL18BP|10068|interleukin 18 binding protein##BC044215|IL18BP|10068|interleukin 18 binding protein##AF110801|IL18BP|10068|interleukin 18 binding protein##NM_005699|IL18BP|10068|interleukin 18 binding protein##NM_173042|IL18BP|10068|interleukin 18 binding protein##AK290509|NUMA1|4926|nuclear mitotic apparatus protein 1##AK309041|NUMA1|4926|nuclear mitotic apparatus protein 1##BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1	0.0	
chr14	58862560	58862669	reg1033149.p1	3.732	+	TSC_hg19_v1_chr14_+_58765292 BC047301 S66427	-97296	+	TSC_hg19_v1_chr14_+_58765261 NM_002892 NM_023000 NM_023001 AK307520 BC026230	-97373	+	TSC_hg19_v1_chr14_-_58764845 AK055868 BC034618 CR627086 BC104151 BC104152 BC112973 BC112974 AK297601	-97781	-	AY358266 NM_207377 BC137557 BC137563 BC144709	30	+	AF150100 TSC_hg19_v1_chr14_-_58893893 AK000666 AK312095	31274	-	AK302836 NM_001244189 NM_001244190 NM_001244191 NM_001244192 AB011158 AK302635 AY359881	31513	+	S66427|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)##NM_002892|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)##NM_023000|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)##NM_023001|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)##AK307520|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)##BC026230|ARID4A|5926|AT rich interactive domain 4A (RBP1-like)##AK055868|FLJ31306|379025|uncharacterized LOC379025##BC034618|FLJ31306|379025|uncharacterized LOC379025##CR627086|FLJ31306|379025|uncharacterized LOC379025##BC104151|FLJ31306|379025|uncharacterized LOC379025##BC104152|FLJ31306|379025|uncharacterized LOC379025##BC112973|FLJ31306|379025|uncharacterized LOC379025##BC112974|FLJ31306|379025|uncharacterized LOC379025##AY358266|TOMM20L|387990|translocase of outer mitochondrial membrane 20 homolog (yeast)-like##NM_207377|TOMM20L|387990|translocase of outer mitochondrial membrane 20 homolog (yeast)-like##BC137557|TOMM20L|387990|translocase of outer mitochondrial membrane 20 homolog (yeast)-like##BC137563|TOMM20L|387990|translocase of outer mitochondrial membrane 20 homolog (yeast)-like##BC144709|TOMM20L|387990|translocase of outer mitochondrial membrane 20 homolog (yeast)-like##AF150100|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)##AK000666|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)##AK312095|TIMM9|26520|translocase of inner mitochondrial membrane 9 homolog (yeast)##AK302836|KIAA0586|9786|KIAA0586##NM_001244189|KIAA0586|9786|KIAA0586##NM_001244190|KIAA0586|9786|KIAA0586##NM_001244191|KIAA0586|9786|KIAA0586##NM_001244192|KIAA0586|9786|KIAA0586##AB011158|KIAA0586|9786|KIAA0586##AK302635|KIAA0586|9786|KIAA0586##AY359881|KIAA0586|9786|KIAA0586	0.939472	CTCF.p2:11:0.939
chr14	93347255	93347367	reg1038932.p1	3.732	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-86625	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	-132352	-	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	-228488	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	42133	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	42286	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	234280	-	NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase	0.068638	
chr16	33119008	33119112	reg1034253.p1	3.732	+	AK300387 TSC_hg19_v1_chr16_+_32752635	-366424	+	AL133588 NM_016212	-431008	-	CR541650 AK312220 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AB023508	-431627	-	AL133588 NM_016212	85919	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	86538	+	AL133588 NM_016212	142454	+	AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AK312220|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AB023508|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3	0.998215	CTCF.p2:19:0.998
chr20	16414844	16414966	reg1031488.p1	3.732	+	BC018687 NM_001033087	-1237402	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-2096649	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-2438569	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	139108	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	295758	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	314116	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	0.0	
chr20	55905085	55905206	reg1039036.p1	3.732	+	AF169385 NM_012444 NM_198265 BC033591 AF149310	-293	+	TSC_hg19_v1_chr20_-_55841684 BC004248 NM_001719	-63457	-	EU679366 AK094784 CU678997 DQ891494 DQ894685 EU176612 AB528364 CU678634 BC008584 M60316 AK312419 AK291186 TSC_hg19_v1_chr20_-_55841286 X51801	-63950	-	NM_003610 TSC_hg19_v1_chr20_+_55926294 AK307966	21074	+	TSC_hg19_v1_chr20_+_55926310 BC103754 AK309743 AK309069 U84720 BC106923 BC106924	21177	+	AK292247 AY349350 NM_001015885	21456	+	AF169385|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_012444|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##NM_198265|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##BC033591|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##AF149310|SPO11|23626|SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae)##BC004248|BMP7|655|bone morphogenetic protein 7##NM_001719|BMP7|655|bone morphogenetic protein 7##EU679366|BMP7|655|bone morphogenetic protein 7##AK094784|BMP7|655|bone morphogenetic protein 7##DQ891494|BMP7|655|bone morphogenetic protein 7##DQ894685|BMP7|655|bone morphogenetic protein 7##EU176612|BMP7|655|bone morphogenetic protein 7##BC008584|BMP7|655|bone morphogenetic protein 7##M60316|BMP7|655|bone morphogenetic protein 7##AK312419|BMP7|655|bone morphogenetic protein 7##AK291186|BMP7|655|bone morphogenetic protein 7##X51801|BMP7|655|bone morphogenetic protein 7##NM_003610|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AK307966|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC103754|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AK309743|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AK309069|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##U84720|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC106923|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC106924|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)	0.420973	CTCF.p2:-11:0.421
chr21	45566356	45566507	reg1000757.p2	3.732	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-12870	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-12926	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-39132	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	94335	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	94426	-	AF194032 NM_013369 NM_175867	115667	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr2	21250483	21250580	reg1032314.p1	3.732	+	X03326 TSC_hg19_v1_chr2_-_21233978	-16575	-	TSC_hg19_v1_chr2_-_21231406 X03324	-19071	-	X03045 TSC_hg19_v1_chr2_-_21230697	-19894	-	M12480 TSC_hg19_v1_chr2_-_21252799	2262	-	TSC_hg19_v1_chr2_-_21266818 AB587530 HM487065 M14081 M14162 BC051278	16290	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	16368	-	X03326|APOB|338|apolipoprotein B (including Ag(x) antigen)##X03324|APOB|338|apolipoprotein B (including Ag(x) antigen)##X03045|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12480|APOB|338|apolipoprotein B (including Ag(x) antigen)##HM487065|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14081|APOB|338|apolipoprotein B (including Ag(x) antigen)##M14162|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC051278|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)	0.049874	
chr3	134515505	134515616	reg1039454.p1	3.732	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-1259	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-1409	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-145715	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	1168971	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	1169060	+	NM_181897 AK316258 L12146	1226058	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.0	
chr4	35726923	35727039	reg1038951.p1	3.732	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-5004522	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-5004787	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-5004982	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	519056	-	AK131492 NM_001136536 AK304357 AK316523	556265	+	BC157885 NM_001170700	558662	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.993898	CTCF.p2:11:0.994
chr5	131338705	131338818	reg1039731.p1	3.732	+	TSC_hg19_v1_chr5_-_131132740 NM_001008738 NM_133372	-206026	-	AK292473 TSC_hg19_v1_chr5_-_131132711	-206050	-	TSC_hg19_v1_chr5_-_131132694 BC001956	-206062	-	AB385389 AB020644 TSC_hg19_v1_chr5_-_131347331 AK294291 NM_001009185 NM_001205247 NM_015256	8540	-	AK314452 BC047453 NM_001205248 NM_001205251 BC026161 NM_001205250 DQ655980	8932	-	M20137 NM_000588 BC069472 BC066272 BC066273 BC066274 BC066275 BC066276 M17115 M14743 CU686832 HQ448457	57611	+	NM_001008738|FNIP1|96459|folliculin interacting protein 1##NM_133372|FNIP1|96459|folliculin interacting protein 1##AK292473|FNIP1|96459|folliculin interacting protein 1##BC001956|FNIP1|96459|folliculin interacting protein 1##AB020644|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##AK294291|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001009185|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205247|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_015256|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##AK314452|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC047453|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205248|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205251|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC026161|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205250|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##DQ655980|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##M20137|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##NM_000588|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC069472|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066272|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066273|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066274|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066275|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066276|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M17115|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M14743|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##HQ448457|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)	0.0	
chr6	157247178	157247359	reg1036792.p1	3.732	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-147393	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-147984	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-148043	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	497316	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	497949	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	555271	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	0.0	
chr7	143462932	143463053	reg1034752.p1	3.732	+	BC110410 BC043153 NM_178561	-8186	-	NM_001130026 AK296318	-50042	+	BC113530 BC117233 NM_173678 AY167570 BC010225	-144450	+	AK299911 TSC_hg19_v1_chr7_-_143582416 NM_001206941	119422	-	TSC_hg19_v1_chr7_-_143599249 AB018281 NM_014719 BC000609 AK291605 AK001640 NM_001206938	136273	-	BC136812 BC136813 NM_001004685	169299	+	BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_178561|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_001130026|FAM115C|285966|family with sequence similarity 115, member C##AK296318|FAM115C|285966|family with sequence similarity 115, member C##BC113530|FAM115C|285966|family with sequence similarity 115, member C##BC117233|FAM115C|285966|family with sequence similarity 115, member C##NM_173678|FAM115C|285966|family with sequence similarity 115, member C##AY167570|FAM115C|285966|family with sequence similarity 115, member C##BC010225|LOC154761|154761|uncharacterized LOC154761##AK299911|FAM115A|9747|family with sequence similarity 115, member A##NM_001206941|FAM115A|9747|family with sequence similarity 115, member A##AB018281|FAM115A|9747|family with sequence similarity 115, member A##NM_014719|FAM115A|9747|family with sequence similarity 115, member A##BC000609|FAM115A|9747|family with sequence similarity 115, member A##AK291605|FAM115A|9747|family with sequence similarity 115, member A##AK001640|FAM115A|9747|family with sequence similarity 115, member A##NM_001206938|FAM115A|9747|family with sequence similarity 115, member A##BC136812|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##BC136813|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##NM_001004685|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2	0.956428	CTCF.p2:-46:0.956
chr8	37559273	37559389	reg1033497.p1	3.732	+	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	-6014	+	TSC_hg19_v1_chr8_-_37457377 AK025743	-101963	-	NM_001031836 AK302391 BC028701	-917461	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	34775	+	TSC_hg19_v1_chr8_+_37594151 BC050611 AK291394 AK297279 AY358108	34813	+	TSC_hg19_v1_chr8_+_37594155 AY358851	34830	+	AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##AK025743|LOC157860|157860|uncharacterized LOC157860##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2##BC050611|ERLIN2|11160|ER lipid raft associated 2##AK291394|ERLIN2|11160|ER lipid raft associated 2##AK297279|ERLIN2|11160|ER lipid raft associated 2##AY358108|ERLIN2|11160|ER lipid raft associated 2##AY358851|ERLIN2|11160|ER lipid raft associated 2	0.044464	
chr8	42658704	42658885	reg1032581.p1	3.732	+	NM_001199279 NM_004198	-34866	-	BC069681 BC069703 BC069788 NM_000749 Y08417 U62438 CU686976 CU686982	-106169	+	TSC_hg19_v1_chr8_-_42397069 BC028600 NM_006749	-261733	-	AL832077 BC021721 AK223231 TSC_hg19_v1_chr8_-_42698469 AK001339 NM_018105 NM_199003	39667	-	BC039461 BC032393 BC013422 AK225086 AL136620 AK225568 AK027748 AK090864 AX746655 BC058289 BC044566 NM_001160223 NM_001160224 NM_001160225 NM_030954	92949	-	TSC_hg19_v1_chr8_+_42752068 BC048304 NM_032410	93258	+	NM_001199279|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6##NM_004198|CHRNA6|8973|cholinergic receptor, nicotinic, alpha 6##BC069681|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##BC069703|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##BC069788|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##NM_000749|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##Y08417|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##U62438|CHRNB3|1142|cholinergic receptor, nicotinic, beta 3##BC028600|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##NM_006749|SLC20A2|6575|solute carrier family 20 (phosphate transporter), member 2##AL832077|THAP1|55145|THAP domain containing, apoptosis associated protein 1##BC021721|THAP1|55145|THAP domain containing, apoptosis associated protein 1##AK223231|THAP1|55145|THAP domain containing, apoptosis associated protein 1##AK001339|THAP1|55145|THAP domain containing, apoptosis associated protein 1##NM_018105|THAP1|55145|THAP domain containing, apoptosis associated protein 1##NM_199003|THAP1|55145|THAP domain containing, apoptosis associated protein 1##BC039461|RNF170|81790|ring finger protein 170##BC032393|RNF170|81790|ring finger protein 170##BC013422|RNF170|81790|ring finger protein 170##AK225086|RNF170|81790|ring finger protein 170##AL136620|RNF170|81790|ring finger protein 170##AK225568|RNF170|81790|ring finger protein 170##AK027748|RNF170|81790|ring finger protein 170##AK090864|RNF170|81790|ring finger protein 170##BC058289|RNF170|81790|ring finger protein 170##BC044566|RNF170|81790|ring finger protein 170##NM_001160223|RNF170|81790|ring finger protein 170##NM_001160224|RNF170|81790|ring finger protein 170##NM_001160225|RNF170|81790|ring finger protein 170##NM_030954|RNF170|81790|ring finger protein 170##BC048304|HOOK3|84376|hook homolog 3 (Drosophila)##NM_032410|HOOK3|84376|hook homolog 3 (Drosophila)	0.0	
chrX	153199896	153199968	reg1041612.p2	3.732	+	TSC_hg19_v1_chrX_-_153191719 BC052303 NM_001164741 NM_001666	-8192	-	TSC_hg19_v1_chrX_-_153191700 AY183123 X78817	-8239	-	D50921 AM392626 AM393222 AB384442 TSC_hg19_v1_chrX_-_153191680	-8270	-	TSC_hg19_v1_chrX_-_153200473 AB528068 AM392552 AM393827 X77588 BC063377 AK296593 AK309083 AY183134 AY183135 BC000308 BC019312 NM_003491 AK294081 AK315997	504	-	D10232 AB527578 BC015558 TSC_hg19_v1_chrX_-_153210096 AK298125 NM_002910	10212	-	BC010606 TSC_hg19_v1_chrX_-_153218266	18280	-	BC052303|ARHGAP4|393|Rho GTPase activating protein 4##NM_001164741|ARHGAP4|393|Rho GTPase activating protein 4##NM_001666|ARHGAP4|393|Rho GTPase activating protein 4##AY183123|ARHGAP4|393|Rho GTPase activating protein 4##X78817|ARHGAP4|393|Rho GTPase activating protein 4##D50921|ARHGAP4|393|Rho GTPase activating protein 4##AM392626|ARHGAP4|393|Rho GTPase activating protein 4##AM393222|ARHGAP4|393|Rho GTPase activating protein 4##AM392552|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AM393827|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##X77588|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##BC063377|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AK296593|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AK309083|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AY183134|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AY183135|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##BC000308|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##BC019312|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##NM_003491|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##AK294081|NAA10|8260|N(alpha)-acetyltransferase 10, NatA catalytic subunit##D10232|RENBP|5973|renin binding protein##BC015558|RENBP|5973|renin binding protein##AK298125|RENBP|5973|renin binding protein##NM_002910|RENBP|5973|renin binding protein##BC010606|HCFC1|3054|host cell factor C1 (VP16-accessory protein)	0.061122	
chr10	74004960	74005083	reg1034497.p2	3.731	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-28910	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-29233	+	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	-29257	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	28803	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	109657	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	109905	-	AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	0.0	
chr11	67368071	67368148	reg1028128.p2	3.731	+	TSC_hg19_v1_chr11_+_67351285 AY887902 BC010915 BC044846 X15480 U62589 U30897	-16820	+	NM_000852 TSC_hg19_v1_chr11_+_67351145	-17003	+	AB528802 AF169154 BC018476 NM_016366	-77261	-	NM_001166102 NM_007103 TSC_hg19_v1_chr11_+_67374428 AF092131 AF053070 BC008146 AK310537 AK223061 AK293522 AK300726 BC015645 AB590249 CR456739 CU677379 CU678877 DQ893236 DQ896566 AK316122	6292	+	BC007619 TSC_hg19_v1_chr11_+_67377037	8872	+	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	29294	-	BC010915|GSTP1|2950|glutathione S-transferase pi 1##BC044846|GSTP1|2950|glutathione S-transferase pi 1##X15480|GSTP1|2950|glutathione S-transferase pi 1##U62589|GSTP1|2950|glutathione S-transferase pi 1##U30897|GSTP1|2950|glutathione S-transferase pi 1##NM_000852|GSTP1|2950|glutathione S-transferase pi 1##AF169154|CABP2|51475|calcium binding protein 2##BC018476|CABP2|51475|calcium binding protein 2##NM_016366|CABP2|51475|calcium binding protein 2##NM_001166102|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_007103|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF092131|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF053070|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC008146|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK310537|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK223061|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK293522|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK300726|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC015645|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##CR456739|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ893236|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ896566|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK316122|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC007619|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8	0.0	
chr1	24635306	24635399	reg1035899.p1	3.731	+	AF439325 AY129151 AY129152 AY129153 AB590083 AK160364 AJ534330 AJ534331 BC101407 BC101408 BC101975 BC139722 NM_170743 NM_173064 NM_173065 TSC_hg19_v1_chr1_-_24513772 BC140872	-121577	-	AB590595 CU688622 AF286095 TSC_hg19_v1_chr1_-_24469610 AK226001 BC029273 BC014096 AK308522 AK292204 AK313971 NM_021258	-165680	-	BX647453 BX647644 BX647455 NM_152372 BC067101	-196703	-	NM_198173 NM_198174 TSC_hg19_v1_chr1_+_24645846	10476	+	AK074386 TSC_hg19_v1_chr1_+_24645958 AK315164 BC036890 NM_001195010	10632	+	AY231160 AY231161 NM_021180	14177	+	AF439325|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129151|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129152|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AY129153|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AK160364|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AJ534330|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AJ534331|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101407|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101408|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC101975|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC139722|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_170743|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_173064|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##NM_173065|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##BC140872|IL28RA|163702|interleukin 28 receptor, alpha (interferon, lambda receptor)##AF286095|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK226001|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC029273|IL22RA1|58985|interleukin 22 receptor, alpha 1##BC014096|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK308522|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK292204|IL22RA1|58985|interleukin 22 receptor, alpha 1##AK313971|IL22RA1|58985|interleukin 22 receptor, alpha 1##NM_021258|IL22RA1|58985|interleukin 22 receptor, alpha 1##BX647453|MYOM3|127294|myomesin family, member 3##BX647644|MYOM3|127294|myomesin family, member 3##BX647455|MYOM3|127294|myomesin family, member 3##NM_152372|MYOM3|127294|myomesin family, member 3##BC067101|MYOM3|127294|myomesin family, member 3##NM_198173|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_198174|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK074386|GRHL3|57822|grainyhead-like 3 (Drosophila)##AK315164|GRHL3|57822|grainyhead-like 3 (Drosophila)##BC036890|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_001195010|GRHL3|57822|grainyhead-like 3 (Drosophila)##AY231160|GRHL3|57822|grainyhead-like 3 (Drosophila)##AY231161|GRHL3|57822|grainyhead-like 3 (Drosophila)##NM_021180|GRHL3|57822|grainyhead-like 3 (Drosophila)	0.0	
chr14	91844890	91844956	reg1035245.p2	3.731	+	BC098567 NM_003485	-124729	-	BC128536 NM_001177676	-134072	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-263896	+	TSC_hg19_v1_chr14_-_91884159 AF070587	39225	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	39252	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	131577	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.299692	
chr15	67374653	67374786	reg1041190.p2	3.731	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	-16318	+	TSC_hg19_v1_chr15_+_67358179 AK290881	-16544	+	NM_001142861 U59914	-373790	+	NM_001145102 AK316017	43404	+	AK298139 NM_001145103	55639	+	NM_001145104 AK300614 AK301348	83777	+	NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##AK290881|SMAD3|4088|SMAD family member 3##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3##AK298139|SMAD3|4088|SMAD family member 3##NM_001145103|SMAD3|4088|SMAD family member 3##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3	0.0	
chr2	114644221	114644353	reg1034234.p2	3.731	+	AK025657 AK315719 TSC_hg19_v1_chr2_-_114514220 BC050096 BC018537 NM_025181	-129990	-	AF529364 CU676258 TSC_hg19_v1_chr2_-_114514079 AY358620	-130209	-	TSC_hg19_v1_chr2_+_114384849 AK289496 AF095350 AF095351 BC126129 BC144050 BC144052	-259381	+	TSC_hg19_v1_chr2_+_114647549 BC044590 NM_005721 AF127773	3260	+	TSC_hg19_v1_chr2_+_114647665 AK316213	3378	+	TSC_hg19_v1_chr2_+_114647673 AK303988	3385	+	AK025657|SLC35F5|80255|solute carrier family 35, member F5##AK315719|SLC35F5|80255|solute carrier family 35, member F5##BC050096|SLC35F5|80255|solute carrier family 35, member F5##BC018537|SLC35F5|80255|solute carrier family 35, member F5##NM_025181|SLC35F5|80255|solute carrier family 35, member F5##AF529364|SLC35F5|80255|solute carrier family 35, member F5##AY358620|SLC35F5|80255|solute carrier family 35, member F5##AK289496|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095350|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095351|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC126129|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144050|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144052|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC044590|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##NM_005721|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AF127773|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AK316213|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AK303988|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	0.0	
chr2	122080572	122080667	reg1039650.p1	3.731	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	-37846	-	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	-525726	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	-976822	+	TSC_hg19_v1_chr2_-_122159142 CR749627	78536	-	AK297259 TSC_hg19_v1_chr2_-_122247924	167300	-	TSC_hg19_v1_chr2_-_122407024 BC112940 AK091140 AX746802 BC132723 BC144107 AK299331 AJ288057 NM_001142273 NM_001142274 NM_001207051 NM_015282	326403	-	AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1##NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##CR749627|CLASP1|23332|cytoplasmic linker associated protein 1##AK297259|CLASP1|23332|cytoplasmic linker associated protein 1##BC112940|CLASP1|23332|cytoplasmic linker associated protein 1##AK091140|CLASP1|23332|cytoplasmic linker associated protein 1##BC132723|CLASP1|23332|cytoplasmic linker associated protein 1##BC144107|CLASP1|23332|cytoplasmic linker associated protein 1##AK299331|CLASP1|23332|cytoplasmic linker associated protein 1##AJ288057|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142273|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142274|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001207051|CLASP1|23332|cytoplasmic linker associated protein 1##NM_015282|CLASP1|23332|cytoplasmic linker associated protein 1	0.985337	CTCF.p2:1:0.985
chr22	30193309	30193444	reg1027262.p1	3.731	+	AF161536 TSC_hg19_v1_chr22_+_30163357 AB028598 BC005402 NM_001003684 NM_013387 AF161500 BC015971 AK225973 AF112217 AF161468	-30007	+	TSC_hg19_v1_chr22_-_30162997 AK123261	-30381	-	BC009717 TSC_hg19_v1_chr22_-_30162985 AK292671 NM_001003692 NM_019103	-30416	-	AK126172 TSC_hg19_v1_chr22_-_30234220 AK022886	40811	-	BC025368 TSC_hg19_v1_chr22_-_30234264 AK303257 NM_001242906 NM_032204	40896	-	TSC_hg19_v1_chr22_+_30279167 BC151217 AK289581 NM_021090 NM_153050 NM_153051	85753	+	AF161536|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AB028598|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##BC005402|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##NM_001003684|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##NM_013387|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AF161500|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##BC015971|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AK225973|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AF112217|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AF161468|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##BC009717|ZMAT5|55954|zinc finger, matrin-type 5##AK292671|ZMAT5|55954|zinc finger, matrin-type 5##NM_001003692|ZMAT5|55954|zinc finger, matrin-type 5##NM_019103|ZMAT5|55954|zinc finger, matrin-type 5##AK022886|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##BC025368|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##AK303257|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##NM_001242906|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##NM_032204|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##BC151217|MTMR3|8897|myotubularin related protein 3##AK289581|MTMR3|8897|myotubularin related protein 3##NM_021090|MTMR3|8897|myotubularin related protein 3##NM_153050|MTMR3|8897|myotubularin related protein 3##NM_153051|MTMR3|8897|myotubularin related protein 3	0.0	
chr3	178764632	178764812	reg1027497.p1	3.731	+	AF209747 NM_005832	-488170	+	BC017825 NM_181361	-510499	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1849663	-	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	24843	-	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	24904	-	TSC_hg19_v1_chr3_+_178866144 NM_006218 AK292940	101516	+	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3##NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	0.24212	CTCF.p2:93:0.242
chr4	6089566	6089655	reg1032655.p1	3.731	+	DQ206871 TSC_hg19_v1_chr4_-_5894794 NM_001014809	-194866	-	BC009987 TSC_hg19_v1_chr4_-_5891940	-197682	-	TSC_hg19_v1_chr4_-_5890302 NM_001313	-199301	-	TSC_hg19_v1_chr4_-_6202277 AK294356 AK307983 AK056126 AM412307 AM412308 AM412309 AM412310 BC026343 NM_001099433 NM_144720	112674	-	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	181958	+	Y18064 TSC_hg19_v1_chr4_+_6271588	181984	+	DQ206871|CRMP1|1400|collapsin response mediator protein 1##NM_001014809|CRMP1|1400|collapsin response mediator protein 1##BC009987|CRMP1|1400|collapsin response mediator protein 1##NM_001313|CRMP1|1400|collapsin response mediator protein 1##AK294356|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK307983|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK056126|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412307|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412308|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412309|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412310|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##BC026343|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_001099433|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_144720|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)	0.658382	CTCF.p2:4:0.658
chr5	71767934	71768058	reg1039582.p1	3.731	+	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-151774	+	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	-151794	+	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	-151916	-	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	35187	-	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	344494	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	375945	+	BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1	0.0	
chr1	25314955	25315047	reg1033128.p2	3.730	+	BC013362 AK310945 NM_001031680 AF022726	-23459	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-58215	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-58262	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	243986	-	BC065040 TSC_hg19_v1_chr1_-_25573922	258922	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	258972	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr15	64188904	64188990	reg1028493.p1	3.730	+	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-62807	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-62827	-	TSC_hg19_v1_chr15_-_64126081 U50078	-62863	-	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	149663	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	197150	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	199193	+	AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1	0.0	
chr16	29690904	29690986	reg1032588.p2	3.730	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-463	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-551	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-15931	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	66356	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	98641	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	111106	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.0	
chr16	29816747	29816869	reg1038331.p1	3.730	+	TSC_hg19_v1_chr16_+_29802074 AK316389 BC028155 BT007259 DQ890771 DQ893652 DQ893932 DQ895829	-14721	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	-14757	+	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	-27222	+	FJ532357 TSC_hg19_v1_chr16_+_29817510	660	+	TSC_hg19_v1_chr16_+_29817813 D85131 NM_001042539 NM_002383 U33819 AF489858 M93339 M94046 AB590469 EF059746	1108	+	L01420 BC041629 AB209061 TSC_hg19_v1_chr16_+_29818849	1967	+	AK316389|KIF22|3835|kinesin family member 22##BC028155|KIF22|3835|kinesin family member 22##BT007259|KIF22|3835|kinesin family member 22##DQ890771|KIF22|3835|kinesin family member 22##DQ893652|KIF22|3835|kinesin family member 22##DQ893932|KIF22|3835|kinesin family member 22##DQ895829|KIF22|3835|kinesin family member 22##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##FJ532357|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##D85131|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##NM_001042539|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##NM_002383|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##U33819|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##AF489858|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##M93339|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##M94046|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##EF059746|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##L01420|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##BC041629|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)##AB209061|MAZ|4150|MYC-associated zinc finger protein (purine-binding transcription factor)	0.257028	CTCF.p2:-4:0.257
chr20	46044243	46044410	reg1029639.p1	3.730	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-58838	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-67679	-	TSC_hg19_v1_chr20_-_45927496 BC030721	-116757	-	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	86296	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	86358	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	370426	-	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2	0.0	
chr2	127931861	127931982	reg1038367.p1	3.730	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	-67180	-	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-518129	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-518214	+	BC039307 NM_001001665	31421	-	AK131190 TSC_hg19_v1_chr2_-_127977781	45796	-	AK091500 CU679129 DQ893802 EU176179 AB384812 AK095557 AK290474 AK309405 TSC_hg19_v1_chr2_-_128051698	119756	-	AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK091500|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##DQ893802|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##EU176179|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK095557|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK290474|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK309405|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)	0.547744	CTCF.p2:38:0.548
chr2	128568856	128568948	reg1036551.p1	3.730	+	BC005401 TSC_hg19_v1_chr2_-_128568746 NM_001006622 NM_001006623 NM_018383	-146	-	BC108671 TSC_hg19_v1_chr2_-_128568739 AB044749 AK002156 BC013990 BC068484 AK223319	-199	-	BC133675 TSC_hg19_v1_chr2_+_128459070 AK074549	-109877	+	AB464041 TSC_hg19_v1_chr2_-_128615689	46779	-	TSC_hg19_v1_chr2_-_128615699 U85510 BC017205	46795	-	TSC_hg19_v1_chr2_-_128615717 BC093795 NM_004805 BC093797	46823	-	BC005401|WDR33|55339|WD repeat domain 33##NM_001006622|WDR33|55339|WD repeat domain 33##NM_001006623|WDR33|55339|WD repeat domain 33##NM_018383|WDR33|55339|WD repeat domain 33##BC108671|WDR33|55339|WD repeat domain 33##AB044749|WDR33|55339|WD repeat domain 33##AK002156|WDR33|55339|WD repeat domain 33##BC013990|WDR33|55339|WD repeat domain 33##BC068484|WDR33|55339|WD repeat domain 33##AK223319|WDR33|55339|WD repeat domain 33##AK074549|SFT2D3|84826|SFT2 domain containing 3##U85510|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D##BC017205|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D##BC093795|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D##NM_004805|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D##BC093797|POLR2D|5433|polymerase (RNA) II (DNA directed) polypeptide D	0.177378	
chr2	97534742	97534899	reg1040818.p1	3.730	+	TSC_hg19_v1_chr2_-_97523744 AB528054 CU689148 AF151034 BC031303 AB209367 AK312193 NM_016466	-11078	-	AF492401 AY196212 BC107056 AK057011 AK092564 AX747600 NM_144994	-25075	-	TSC_hg19_v1_chr2_+_97482006 BC037272 AK126847 NM_017623 NM_199078 BC007199 AF216965 AK000025 CU675553	-52338	+	TSC_hg19_v1_chr2_-_97535634 BC109104 BC109103	811	-	TSC_hg19_v1_chr2_-_97535818 AY358842 NM_017789	941	-	AF151068 NM_001172667	26056	-	AF151034|ANKRD39|51239|ankyrin repeat domain 39##BC031303|ANKRD39|51239|ankyrin repeat domain 39##AK312193|ANKRD39|51239|ankyrin repeat domain 39##NM_016466|ANKRD39|51239|ankyrin repeat domain 39##AF492401|ANKRD23|200539|ankyrin repeat domain 23##AY196212|ANKRD23|200539|ankyrin repeat domain 23##BC107056|ANKRD23|200539|ankyrin repeat domain 23##AK057011|ANKRD23|200539|ankyrin repeat domain 23##AK092564|ANKRD23|200539|ankyrin repeat domain 23##NM_144994|ANKRD23|200539|ankyrin repeat domain 23##BC037272|CNNM3|26505|cyclin M3##AK126847|CNNM3|26505|cyclin M3##NM_017623|CNNM3|26505|cyclin M3##NM_199078|CNNM3|26505|cyclin M3##BC007199|CNNM3|26505|cyclin M3##AF216965|CNNM3|26505|cyclin M3##AK000025|CNNM3|26505|cyclin M3##BC109104|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##BC109103|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##AY358842|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##NM_017789|SEMA4C|54910|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C##AF151068|FAM178B|51252|family with sequence similarity 178, member B##NM_001172667|FAM178B|51252|family with sequence similarity 178, member B	0.122968	
chr3	16294233	16294387	reg1041413.p1	3.730	+	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-78116	+	AB002377 NM_015199 TSC_hg19_v1_chr3_-_15901096	-393298	-	TSC_hg19_v1_chr3_-_15839678 AK293770 NM_001195098	-454628	-	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	12079	-	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	12398	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	260708	-	AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AB002377|ANKRD28|23243|ankyrin repeat domain 28##NM_015199|ANKRD28|23243|ankyrin repeat domain 28##AK293770|ANKRD28|23243|ankyrin repeat domain 28##NM_001195098|ANKRD28|23243|ankyrin repeat domain 28##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1	0.0	
chr3	180320769	180320847	reg1037290.p2	3.730	+	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	-805	+	AB032593 NM_016559 AB032592 TSC_hg19_v1_chr3_-_179754937 AK299633 AK294501 AK314283 BC036183	-566082	-	TSC_hg19_v1_chr3_+_179370901 NM_003940 U75362 BC016146 AK290338 AM393315 AM393392 AM393610 AM393780 DQ892472 DQ895684	-949913	+	AB075860 TSC_hg19_v1_chr3_+_180320970	155	+	AK304270 NM_181426	76463	-	TSC_hg19_v1_chr3_+_180630246 NM_001013438 NM_001013439 NM_005087	309375	+	NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##AB032593|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_016559|PEX5L|51555|peroxisomal biogenesis factor 5-like##AB032592|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK299633|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK294501|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK314283|PEX5L|51555|peroxisomal biogenesis factor 5-like##BC036183|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_003940|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##U75362|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##BC016146|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AK290338|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393315|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393392|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393610|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393780|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ892472|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ895684|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AB075860|TTC14|151613|tetratricopeptide repeat domain 14##AK304270|CCDC39|339829|coiled-coil domain containing 39##NM_181426|CCDC39|339829|coiled-coil domain containing 39##NM_001013438|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013439|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_005087|FXR1|8087|fragile X mental retardation, autosomal homolog 1	0.0	
chr3	186247270	186247410	reg1033426.p1	3.730	+	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	-167406	-	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	-420484	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	-420994	-	CU686840 AF161703 BC069478 AK314172 NM_017541	14800	-	TSC_hg19_v1_chr3_-_186285118 AK001422 BC025748	37768	-	NM_018138 TSC_hg19_v1_chr3_-_186285140	37801	-	BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa##BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##AF161703|CRYGS|1427|crystallin, gamma S##BC069478|CRYGS|1427|crystallin, gamma S##AK314172|CRYGS|1427|crystallin, gamma S##NM_017541|CRYGS|1427|crystallin, gamma S##AK001422|TBCCD1|55171|TBCC domain containing 1##BC025748|TBCCD1|55171|TBCC domain containing 1##NM_018138|TBCCD1|55171|TBCC domain containing 1	0.046078	
chr6	5996940	5997015	reg1037360.p1	3.730	+	TSC_hg19_v1_chr6_+_5261758 NM_006567 AK223423 BC020239 BC021112 BC014273	-735287	+	TSC_hg19_v1_chr6_+_5261294 AK312454	-735715	+	TSC_hg19_v1_chr6_-_5261177 NM_001164840 NM_001164841 NM_020408	-735811	-	AJ420483 TSC_hg19_v1_chr6_-_6007133 BC002683 AF136631 AF114833 AK314095	10164	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	10720	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	323908	-	NM_006567|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK223423|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC020239|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##BC021112|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##AK312454|FARS2|10667|phenylalanyl-tRNA synthetase 2, mitochondrial##NM_001164840|LYRM4|57128|LYR motif containing 4##NM_001164841|LYRM4|57128|LYR motif containing 4##NM_020408|LYRM4|57128|LYR motif containing 4##AJ420483|NRN1|51299|neuritin 1##BC002683|NRN1|51299|neuritin 1##AF136631|NRN1|51299|neuritin 1##AF114833|NRN1|51299|neuritin 1##AK314095|NRN1|51299|neuritin 1##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide	0.0	
chrX	10051013	10051193	reg1032324.p1	3.730	+	BC098455 NM_015691	-67310	+	NM_001195081	-115706	+	BC140866 TSC_hg19_v1_chrX_+_9754543	-296560	+	NM_001830 TSC_hg19_v1_chrX_+_10125020 AK225287 X77197 AK289564 BC130278	73951	+	AF041210 AB384764 AY539988 AY539994 AY540022 AY540023 EU446510 NM_001193278 NM_001193279 NM_001193280 NM_001193281	484456	-	AF035360 NM_001193277 AY112903	493801	-	BC098455|WWC3|55841|WWC family member 3##NM_015691|WWC3|55841|WWC family member 3##NM_001195081|LOC100288814|100288814|uncharacterized LOC100288814##BC140866|SHROOM2|357|shroom family member 2##NM_001830|CLCN4|1183|chloride channel 4##AK225287|CLCN4|1183|chloride channel 4##X77197|CLCN4|1183|chloride channel 4##AK289564|CLCN4|1183|chloride channel 4##BC130278|CLCN4|1183|chloride channel 4##AF041210|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539988|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY539994|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540022|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY540023|MID1|4281|midline 1 (Opitz/BBB syndrome)##EU446510|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193278|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193279|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193280|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193281|MID1|4281|midline 1 (Opitz/BBB syndrome)##AF035360|MID1|4281|midline 1 (Opitz/BBB syndrome)##NM_001193277|MID1|4281|midline 1 (Opitz/BBB syndrome)##AY112903|MID1|4281|midline 1 (Opitz/BBB syndrome)	0.0	
chr10	61382512	61382635	reg1005923.p4	3.729	+	AK299924 NM_001143773	-259913	-	CU687880 DQ894404 EU176262 AK294805 AK289796 TSC_hg19_v1_chr10_-_61122308 BC036453 AK316542 BC064431 NM_001001971 NM_001166698 NM_198215	-260288	-	AL365474 NM_001143774 AM393181	-445285	+	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	87151	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	283628	-	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	283751	-	AK299924|FAM13C|220965|family with sequence similarity 13, member C##NM_001143773|FAM13C|220965|family with sequence similarity 13, member C##DQ894404|FAM13C|220965|family with sequence similarity 13, member C##EU176262|FAM13C|220965|family with sequence similarity 13, member C##AK294805|FAM13C|220965|family with sequence similarity 13, member C##AK289796|FAM13C|220965|family with sequence similarity 13, member C##BC036453|FAM13C|220965|family with sequence similarity 13, member C##AK316542|FAM13C|220965|family with sequence similarity 13, member C##BC064431|FAM13C|220965|family with sequence similarity 13, member C##NM_001001971|FAM13C|220965|family with sequence similarity 13, member C##NM_001166698|FAM13C|220965|family with sequence similarity 13, member C##NM_198215|FAM13C|220965|family with sequence similarity 13, member C##AL365474|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_001143774|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM393181|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##S72869|CCDC6|8030|coiled-coil domain containing 6##BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6	0.0	
chr11	35433988	35434086	reg1033410.p1	3.729	+	CR627009 TSC_hg19_v1_chr11_-_35278776 CR626999	-155212	-	TSC_hg19_v1_chr11_+_35198199 AK129808	-235825	+	AF098641 TSC_hg19_v1_chr11_+_35160882 EF581837 AB384769 CU678692 AK290424 FJ216964 M25078	-273177	+	AB527302 AB209444 U03505 D85884 Z32517 AK298769 BC132768 AY066021 TSC_hg19_v1_chr11_-_35440905	6674	-	TSC_hg19_v1_chr11_-_35441106 NM_004171	7066	-	S83375 U01824 TSC_hg19_v1_chr11_-_35441572 AK122843 NM_001195728 NM_001252652	7518	-	CR627009|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##CR626999|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK129808|CD44|960|CD44 molecule (Indian blood group)##AF098641|CD44|960|CD44 molecule (Indian blood group)##EF581837|CD44|960|CD44 molecule (Indian blood group)##AK290424|CD44|960|CD44 molecule (Indian blood group)##FJ216964|CD44|960|CD44 molecule (Indian blood group)##M25078|CD44|960|CD44 molecule (Indian blood group)##AB209444|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U03505|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##D85884|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##Z32517|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK298769|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##BC132768|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AY066021|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_004171|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##U01824|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##AK122843|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001195728|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2##NM_001252652|SLC1A2|6506|solute carrier family 1 (glial high affinity glutamate transporter), member 2	0.920731	CTCF.p2:21:0.921
chr11	84511919	84512038	reg1035024.p1	3.729	+	AK127150 NM_001206769 TSC_hg19_v1_chr11_-_84028381	-483597	-	AK294375 AK126776 AK295624 NM_001142700	-527702	-	AK299778 CR933674 NM_001142702	-1118527	-	TSC_hg19_v1_chr11_-_84634219 AK299797 BC143964	122254	-	U32376 AB209252 AK295094 NM_001364	122472	-	CR749820 NM_001142699	826335	-	AK127150|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001206769|DLG2|1740|discs, large homolog 2 (Drosophila)##AK294375|DLG2|1740|discs, large homolog 2 (Drosophila)##AK126776|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295624|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142700|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299778|DLG2|1740|discs, large homolog 2 (Drosophila)##CR933674|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142702|DLG2|1740|discs, large homolog 2 (Drosophila)##AK299797|DLG2|1740|discs, large homolog 2 (Drosophila)##BC143964|DLG2|1740|discs, large homolog 2 (Drosophila)##U32376|DLG2|1740|discs, large homolog 2 (Drosophila)##AB209252|DLG2|1740|discs, large homolog 2 (Drosophila)##AK295094|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001364|DLG2|1740|discs, large homolog 2 (Drosophila)##CR749820|DLG2|1740|discs, large homolog 2 (Drosophila)##NM_001142699|DLG2|1740|discs, large homolog 2 (Drosophila)	0.040752	
chr1	41321323	41321426	reg1030633.p1	3.729	+	TSC_hg19_v1_chr1_+_41284599 AK074957	-36757	+	TSC_hg19_v1_chr1_+_41249485 AF105202 NM_004700 NM_172163	-71793	+	AF191744 AB385526 BT020081 U62296 TSC_hg19_v1_chr1_+_41204591	-116824	+	TSC_hg19_v1_chr1_-_41328006 BC052559 NM_133467	6635	-	BC035496 TSC_hg19_v1_chr1_-_41328020	6646	-	TSC_hg19_v1_chr1_+_41444968 NM_001905	123613	+	AK074957|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##AF105202|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_004700|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##NM_172163|KCNQ4|9132|potassium voltage-gated channel, KQT-like subfamily, member 4##AF191744|NFYC|4802|nuclear transcription factor Y, gamma##BT020081|NFYC|4802|nuclear transcription factor Y, gamma##U62296|NFYC|4802|nuclear transcription factor Y, gamma##BC052559|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##NM_133467|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##BC035496|CITED4|163732|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4##NM_001905|CTPS|1503|CTP synthase	0.0	
chr14	39937490	39937567	reg1018564.p2	3.729	+	BC053537 BC068566 BC030611 NM_203301	-35867	-	TSC_hg19_v1_chr14_-_39901371 BX248772	-36171	-	TSC_hg19_v1_chr14_+_39736592 BC039017 AK315254 BC029513 BC051363 U73682	-200955	+	NM_152447 AK096627	2139239	+	AK302615 CR933626 BC039878 CR933608 AK124110 NM_032135	5038947	-	TSC_hg19_v1_chr14_+_45366532 NM_001017923 BC105030 BC105032 AF250395	5428970	+	BC053537|FBXO33|254170|F-box protein 33##BC068566|FBXO33|254170|F-box protein 33##BC030611|FBXO33|254170|F-box protein 33##NM_203301|FBXO33|254170|F-box protein 33##BX248772|FBXO33|254170|F-box protein 33##BC039017|CTAGE5|4253|CTAGE family, member 5##AK315254|CTAGE5|4253|CTAGE family, member 5##BC029513|CTAGE5|4253|CTAGE family, member 5##BC051363|CTAGE5|4253|CTAGE family, member 5##U73682|CTAGE5|4253|CTAGE family, member 5##NM_152447|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK096627|LRFN5|145581|leucine rich repeat and fibronectin type III domain containing 5##AK302615|FSCB|84075|fibrous sheath CABYR binding protein##CR933626|FSCB|84075|fibrous sheath CABYR binding protein##BC039878|FSCB|84075|fibrous sheath CABYR binding protein##CR933608|FSCB|84075|fibrous sheath CABYR binding protein##AK124110|FSCB|84075|fibrous sheath CABYR binding protein##NM_032135|FSCB|84075|fibrous sheath CABYR binding protein##NM_001017923|C14orf28|122525|chromosome 14 open reading frame 28##BC105030|C14orf28|122525|chromosome 14 open reading frame 28##BC105032|C14orf28|122525|chromosome 14 open reading frame 28##AF250395|C14orf28|122525|chromosome 14 open reading frame 28	0.733922	CTCF.p2:104:0.734
chr14	71294292	71294369	reg1030846.p1	3.729	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-18521	-	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	-185721	+	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	-226953	-	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	79803	+	TSC_hg19_v1_chr14_+_71374441 BC140784	80121	+	AF090989 AF090990 NM_015556	701711	+	AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9##AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1	0.234069	CTCF.p2:0:0.234
chr16	11419757	11419893	reg1036384.p2	3.729	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-44683	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	-49505	-	NM_021247	-52374	-	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	19469	+	TSC_hg19_v1_chr16_+_11439315 BC013040	19493	+	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	260362	-	BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2##NM_021247|PRM3|58531|protamine 3##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor	0.084498	
chr16	11420726	11420811	reg1024405.p1	3.729	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-45626	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	-50448	-	NM_021247	-53317	-	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	18526	+	TSC_hg19_v1_chr16_+_11439315 BC013040	18550	+	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	259419	-	BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2##NM_021247|PRM3|58531|protamine 3##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor	0.0	
chr3	14539031	14539114	reg1034123.p2	3.729	+	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	-94956	+	TSC_hg19_v1_chr3_+_14444072 AK303649	-95003	+	TSC_hg19_v1_chr3_+_14220355 AJ238095 AB463841 CR457185	-318721	+	NM_001080423	44515	-	TSC_hg19_v1_chr3_+_14693268 NM_016474 AK091158 AX746816 BC005199 BC033897 BC013999	154186	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	154211	+	NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AJ238095|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##CR457185|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2##NM_016474|C3orf19|51244|chromosome 3 open reading frame 19##AK091158|C3orf19|51244|chromosome 3 open reading frame 19##BC005199|C3orf19|51244|chromosome 3 open reading frame 19##BC033897|C3orf19|51244|chromosome 3 open reading frame 19##BC013999|C3orf19|51244|chromosome 3 open reading frame 19##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19	0.0	
chr12	69979639	69979819	reg1035651.p2	3.728	+	AK294307 AK316408 NM_001198842 AK316397 AK302157	-180	+	AF026293 TSC_hg19_v1_chr12_+_69979275	-452	+	TSC_hg19_v1_chr12_+_69979238 NM_006431 AK290767 BC113514 BC113516 AK297685 AF026166	-505	+	BC090881 NM_201550	25212	-	NM_152439 BC028087	103326	-	BC151138 TSC_hg19_v1_chr12_-_70093084 BC006440 AF440758 AK096459 NM_032735	113400	-	AK294307|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK316408|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##NM_001198842|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK316397|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK302157|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AF026293|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##NM_006431|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK290767|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC113514|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC113516|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AK297685|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##AF026166|CCT2|10576|chaperonin containing TCP1, subunit 2 (beta)##BC090881|LRRC10|376132|leucine rich repeat containing 10##NM_201550|LRRC10|376132|leucine rich repeat containing 10##NM_152439|BEST3|144453|bestrophin 3##BC028087|BEST3|144453|bestrophin 3##BC151138|BEST3|144453|bestrophin 3##BC006440|BEST3|144453|bestrophin 3##AF440758|BEST3|144453|bestrophin 3##AK096459|BEST3|144453|bestrophin 3##NM_032735|BEST3|144453|bestrophin 3	0.089276	
chr13	73140167	73140275	reg1036896.p1	3.728	+	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	-698787	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	-699458	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	-699962	-	TSC_hg19_v1_chr13_-_73301768 BC062361 BC013405 BC080523 AK025522 BC125183 NM_001071775	161610	-	EU834129 TSC_hg19_v1_chr13_+_73302063 AK300758 BX648605 NM_024808 AK298608 AK291496 BC056876 BC025367 EU832508 EU832589	161863	+	AB385417 TSC_hg19_v1_chr13_-_73355994 AB001743 AF330044	215766	-	AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##BC062361|MZT1|440145|mitotic spindle organizing protein 1##BC013405|MZT1|440145|mitotic spindle organizing protein 1##BC080523|MZT1|440145|mitotic spindle organizing protein 1##AK025522|MZT1|440145|mitotic spindle organizing protein 1##BC125183|MZT1|440145|mitotic spindle organizing protein 1##NM_001071775|MZT1|440145|mitotic spindle organizing protein 1##EU834129|BORA|79866|bora, aurora kinase A activator##AK300758|BORA|79866|bora, aurora kinase A activator##BX648605|BORA|79866|bora, aurora kinase A activator##NM_024808|BORA|79866|bora, aurora kinase A activator##AK298608|BORA|79866|bora, aurora kinase A activator##AK291496|BORA|79866|bora, aurora kinase A activator##BC056876|BORA|79866|bora, aurora kinase A activator##BC025367|BORA|79866|bora, aurora kinase A activator##EU832508|BORA|79866|bora, aurora kinase A activator##EU832589|BORA|79866|bora, aurora kinase A activator##AB001743|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)##AF330044|DIS3|22894|DIS3 mitotic control homolog (S. cerevisiae)	0.056363	
chr14	76043635	76043701	reg1007628.p1	3.728	+	TSC_hg19_v1_chr14_+_75988840 D42106	-54816	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	-54878	+	BC051303 NM_001135049	-144832	+	NM_017791 AY260572 AY260577 BC019087 AK000378	1297	+	AK297002 NM_001195283	28136	+	AF134159 TSC_hg19_v1_chr14_-_76127220 AK311764 AL136658 AF136971 AF161406 BC002444	83528	-	D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AF134159|C14orf1|11161|chromosome 14 open reading frame 1##AK311764|C14orf1|11161|chromosome 14 open reading frame 1##AL136658|C14orf1|11161|chromosome 14 open reading frame 1##AF136971|C14orf1|11161|chromosome 14 open reading frame 1##AF161406|C14orf1|11161|chromosome 14 open reading frame 1##BC002444|C14orf1|11161|chromosome 14 open reading frame 1	0.0	
chr17	62223068	62223165	reg1042259.p1	3.728	+	AF059198 AB209869 TSC_hg19_v1_chr17_-_62207502 NM_001433 AK292403	-15600	-	TSC_hg19_v1_chr17_-_62207401 AB385116 BC130405 BC130407	-15718	-	TSC_hg19_v1_chr17_-_62097985 AK295382 AK309953 NM_001099786 NM_001099787 NM_001099788 NM_001099789	-125134	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	117470	-	TSC_hg19_v1_chr17_-_62340645 BC036672	117531	-	BC040522 NM_018469 TSC_hg19_v1_chr17_-_62340654	117538	-	AF059198|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AB209869|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##NM_001433|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK292403|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130405|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130407|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK295382|ICAM2|3384|intercellular adhesion molecule 2##NM_001099786|ICAM2|3384|intercellular adhesion molecule 2##NM_001099787|ICAM2|3384|intercellular adhesion molecule 2##NM_001099788|ICAM2|3384|intercellular adhesion molecule 2##NM_001099789|ICAM2|3384|intercellular adhesion molecule 2##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2##BC036672|TEX2|55852|testis expressed 2##BC040522|TEX2|55852|testis expressed 2##NM_018469|TEX2|55852|testis expressed 2	0.0	
chr22	43327571	43327655	reg1040825.p1	3.728	+	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-74258	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	-74343	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	-74402	-	BC008037 NM_007229	15433	-	AL136845 NM_001184971	28273	-	TSC_hg19_v1_chr22_-_43411136 AF128536	83526	-	NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	0.0	
chr2	24437968	24438149	reg1035215.p1	3.728	+	BC050462 NM_001040710	-40087	+	TSC_hg19_v1_chr2_+_24346339 NM_001145710	-91699	+	TSC_hg19_v1_chr2_-_24346174 BC029523 NM_199346 BC043236 AK292601	-91814	-	TSC_hg19_v1_chr2_-_24583385 AB033082 BC146779 AF182198 AF182199 BC038963 NM_006277 NM_019595 NM_147152	145422	-	NM_003743 NM_147223 NM_147233 AJ000881 AJ000882 U59302	369319	+	TSC_hg19_v1_chr2_-_25016225 CU687260 BC073803 NM_001013663	578180	-	BC050462|C2orf84|653140|chromosome 2 open reading frame 84##NM_001040710|C2orf84|653140|chromosome 2 open reading frame 84##NM_001145710|LOC375190|375190|UPF0638 protein B##BC029523|PFN4|375189|profilin family, member 4##NM_199346|PFN4|375189|profilin family, member 4##BC043236|PFN4|375189|profilin family, member 4##AK292601|PFN4|375189|profilin family, member 4##AB033082|ITSN2|50618|intersectin 2##BC146779|ITSN2|50618|intersectin 2##AF182198|ITSN2|50618|intersectin 2##AF182199|ITSN2|50618|intersectin 2##BC038963|ITSN2|50618|intersectin 2##NM_006277|ITSN2|50618|intersectin 2##NM_019595|ITSN2|50618|intersectin 2##NM_147152|ITSN2|50618|intersectin 2##NM_003743|NCOA1|8648|nuclear receptor coactivator 1##NM_147223|NCOA1|8648|nuclear receptor coactivator 1##NM_147233|NCOA1|8648|nuclear receptor coactivator 1##AJ000881|NCOA1|8648|nuclear receptor coactivator 1##AJ000882|NCOA1|8648|nuclear receptor coactivator 1##U59302|NCOA1|8648|nuclear receptor coactivator 1##BC073803|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001013663|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1	0.0	
chr6	42307876	42307979	reg1042297.p1	3.728	+	TSC_hg19_v1_chr6_-_42185603 NM_018141	-122310	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-122327	-	TSC_hg19_v1_chr6_-_42185597 AK316599 BC012560	-122330	-	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	111896	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	223823	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	223850	+	NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##AK316599|MRPS10|55173|mitochondrial ribosomal protein S10##BC012560|MRPS10|55173|mitochondrial ribosomal protein S10##AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.0	
chr8	29499935	29500026	reg1033762.p2	3.728	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-291910	-	AL137704 NM_057158	-293659	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-379366	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	440494	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	440592	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	452963	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.047521	
chr12	125280032	125280213	reg1017384.p2	3.727	+	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	-228047	-	TSC_hg19_v1_chr12_-_125002875 BC033087	-277263	-	AK126577 NM_181709	-506413	+	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	68183	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	68255	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	68351	-	AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr1	226070165	226070285	reg1033006.p2	3.727	+	TSC_hg19_v1_chr1_-_226070033 AB018335 AK222934 AK222944 BC030245 AK022502	-175	-	DQ892506 DQ895720 CU678903 CR541963 M36374 TSC_hg19_v1_chr1_+_226016535	-53744	+	TSC_hg19_v1_chr1_+_226013054 NM_000120 L25879 J03518 Y00424 L25878 X07936	-57150	+	NM_014698	194	-	CU693310 AB590421 DQ896626 AY358873 BC027883 AF081512 AK309263 TSC_hg19_v1_chr1_-_226076847 AK129605 AK222714 AK313115 NM_020997	6583	-	TSC_hg19_v1_chr1_-_226111850 CU676554 AF151351	41602	-	AB018335|TMEM63A|9725|transmembrane protein 63A##AK222934|TMEM63A|9725|transmembrane protein 63A##AK222944|TMEM63A|9725|transmembrane protein 63A##BC030245|TMEM63A|9725|transmembrane protein 63A##AK022502|TMEM63A|9725|transmembrane protein 63A##DQ892506|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##DQ895720|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##CR541963|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##M36374|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##NM_000120|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##L25879|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##J03518|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##Y00424|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##L25878|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##X07936|EPHX1|2052|epoxide hydrolase 1, microsomal (xenobiotic)##NM_014698|TMEM63A|9725|transmembrane protein 63A##DQ896626|LEFTY1|10637|left-right determination factor 1##AY358873|LEFTY1|10637|left-right determination factor 1##BC027883|LEFTY1|10637|left-right determination factor 1##AF081512|LEFTY1|10637|left-right determination factor 1##AK309263|LEFTY1|10637|left-right determination factor 1##AK129605|LEFTY1|10637|left-right determination factor 1##AK222714|LEFTY1|10637|left-right determination factor 1##AK313115|LEFTY1|10637|left-right determination factor 1##NM_020997|LEFTY1|10637|left-right determination factor 1##AF151351|PYCR2|29920|pyrroline-5-carboxylate reductase family, member 2	0.014215	
chr12	6540902	6541014	reg1034412.p2	3.727	+	TSC_hg19_v1_chr12_+_6493333 AK095418 BC026262 AK027080 L04270 NM_002342 AB527559 DQ891995 DQ895185 CU693188	-47586	+	AK304379 NM_001159575	-54436	-	NM_001038	-56054	-	AK315732 NM_001242 BC012160 M63928 DQ892296 EU176659 AB590221 CU680244	13188	+	NM_018009 TSC_hg19_v1_chr12_+_6561272 BC015017 AK223163 AK001005 AK002056 AK222956 AK098035 HQ258015	20336	+	TSC_hg19_v1_chr12_-_6579844 AF060538 BC023286 AK289498 AK296294 AK303137 AK309184 NM_014231 NM_016830 NM_199245	38856	-	AK095418|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##BC026262|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK027080|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##L04270|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##NM_002342|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ891995|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ895185|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK304379|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001159575|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001038|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##AK315732|CD27|939|CD27 molecule##NM_001242|CD27|939|CD27 molecule##BC012160|CD27|939|CD27 molecule##M63928|CD27|939|CD27 molecule##DQ892296|CD27|939|CD27 molecule##EU176659|CD27|939|CD27 molecule##NM_018009|TAPBPL|55080|TAP binding protein-like##BC015017|TAPBPL|55080|TAP binding protein-like##AK223163|TAPBPL|55080|TAP binding protein-like##AK001005|TAPBPL|55080|TAP binding protein-like##AK002056|TAPBPL|55080|TAP binding protein-like##AK222956|TAPBPL|55080|TAP binding protein-like##AK098035|TAPBPL|55080|TAP binding protein-like##HQ258015|TAPBPL|55080|TAP binding protein-like##AF060538|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC023286|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK289498|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK296294|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK303137|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK309184|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_014231|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_016830|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_199245|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)	0.0	
chr12	7055509	7055660	reg1035491.p1	3.727	+	TSC_hg19_v1_chr12_+_7053185 AK311912 BC009925 NM_138425	-2387	+	TSC_hg19_v1_chr12_+_7045476 AB209345	-10128	+	TSC_hg19_v1_chr12_+_7037385 NM_001940 D31840	-18151	+	TSC_hg19_v1_chr12_+_7055736 AK313379 NM_080548	153	+	BC002523 BC007667 TSC_hg19_v1_chr12_+_7055771 AK300167 AB590143 BT007390 CU675749 DQ891946 DQ895133	236	+	NM_002831 NM_080549 TSC_hg19_v1_chr12_+_7060446	4857	+	AK311912|C12orf57|113246|chromosome 12 open reading frame 57##BC009925|C12orf57|113246|chromosome 12 open reading frame 57##NM_138425|C12orf57|113246|chromosome 12 open reading frame 57##NM_001940|ATN1|1822|atrophin 1##D31840|ATN1|1822|atrophin 1##AK313379|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##NM_080548|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##BC002523|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##BC007667|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK300167|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##BT007390|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ891946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ895133|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##NM_002831|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##NM_080549|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	0.121205	
chr1	31869628	31869747	reg1035194.p1	3.727	+	S67314 AK314122 BT006727 CR456867 DQ893154 DQ896449 Y10255 X56549 BC007021 NM_004102	-23817	-	TSC_hg19_v1_chr1_+_31769878 AK024049 AK307478 AF151085 AK001929 AK302248 AK302343 BC050609 BC007446 AF151077 BC000685 AF247661	-99764	+	TSC_hg19_v1_chr1_+_31769844 AK022506 NM_016505	-99852	+	AK127659 NM_001199038	12724	+	NM_001199037 AK298512	13346	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	16379	+	S67314|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##AK314122|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##BT006727|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##CR456867|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##DQ893154|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##DQ896449|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##Y10255|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##X56549|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##BC007021|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##NM_004102|FABP3|2170|fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor)##AK024049|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK307478|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AF151085|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK001929|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK302248|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK302343|ZCCHC17|51538|zinc finger, CCHC domain containing 17##BC050609|ZCCHC17|51538|zinc finger, CCHC domain containing 17##BC007446|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AF151077|ZCCHC17|51538|zinc finger, CCHC domain containing 17##BC000685|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AF247661|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK022506|ZCCHC17|51538|zinc finger, CCHC domain containing 17##NM_016505|ZCCHC17|51538|zinc finger, CCHC domain containing 17##AK127659|SERINC2|347735|serine incorporator 2##NM_001199038|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2	0.995364	CTCF.p2:-37:0.995
chr15	63767030	63767127	reg1035062.p1	3.727	+	AK315769 NM_001218 NM_206925 TSC_hg19_v1_chr15_-_63674076	-93003	-	BT006656 DQ893188 DQ896511 EU831616 EU831623 EU831703 EU831708 AF051882 BC000278 AF037335 BC011691 TSC_hg19_v1_chr15_-_63674046 AK096845 BC023981	-93086	-	NM_001145646 NM_031301 TSC_hg19_v1_chr15_+_63569803 AK291204 AL136671 BC020905 AB189172 AB197122 AF508794 AX776001 AY358698 AB528062 AM392724 AM392878 DQ891401 CU676772 AK307725	-197265	+	TSC_hg19_v1_chr15_+_63796791 AK314223	29704	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	29799	+	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	122501	+	AK315769|CA12|771|carbonic anhydrase XII##NM_001218|CA12|771|carbonic anhydrase XII##NM_206925|CA12|771|carbonic anhydrase XII##BT006656|CA12|771|carbonic anhydrase XII##DQ893188|CA12|771|carbonic anhydrase XII##DQ896511|CA12|771|carbonic anhydrase XII##EU831616|CA12|771|carbonic anhydrase XII##EU831623|CA12|771|carbonic anhydrase XII##EU831703|CA12|771|carbonic anhydrase XII##EU831708|CA12|771|carbonic anhydrase XII##AF051882|CA12|771|carbonic anhydrase XII##BC000278|CA12|771|carbonic anhydrase XII##AF037335|CA12|771|carbonic anhydrase XII##BC011691|CA12|771|carbonic anhydrase XII##AK096845|CA12|771|carbonic anhydrase XII##BC023981|CA12|771|carbonic anhydrase XII##NM_001145646|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##NM_031301|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK291204|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AL136671|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##BC020905|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB189172|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AB197122|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AF508794|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AY358698|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392724|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AM392878|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##DQ891401|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK307725|APH1B|83464|anterior pharynx defective 1 homolog B (C. elegans)##AK314223|USP3|9960|ubiquitin specific peptidase 3##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22	0.0	
chr17	70723283	70723374	reg1005103.p2	3.727	+	AK000477 TSC_hg19_v1_chr17_-_70588944	-134385	-	TSC_hg19_v1_chr17_+_70117187 BC007951	-606088	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-606158	+	AF331643 TSC_hg19_v1_chr17_-_71088816	365488	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	365495	-	BC035631 TSC_hg19_v1_chr17_-_71088831	365503	-	AK000477|LOC100499467|100499467|uncharacterized LOC100499467##BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr18	53991067	53991146	reg1034605.p2	3.727	+	AB527692 BC031056 NM_001243226	-687948	-	AK315074 AK299169 NM_001243227 NM_001243228	-734068	-	FR748206 FR748216 TSC_hg19_v1_chr18_-_53255849 AK122765 NM_001083962 NM_001243230 NM_003199	-735309	-	AB209263 DQ891846 DQ895034 EU176640 TSC_hg19_v1_chr18_-_54305824 AF051896 AF052659 AK313653	314641	-	TSC_hg19_v1_chr18_-_54305956 BC001156 AF003938 NM_004786	314808	-	TSC_hg19_v1_chr18_+_54318593 AK057141 NM_015285 NM_052834 AB011113 BC150282	327500	+	BC031056|TCF4|6925|transcription factor 4##NM_001243226|TCF4|6925|transcription factor 4##AK315074|TCF4|6925|transcription factor 4##AK299169|TCF4|6925|transcription factor 4##NM_001243227|TCF4|6925|transcription factor 4##NM_001243228|TCF4|6925|transcription factor 4##FR748216|TCF4|6925|transcription factor 4##AK122765|TCF4|6925|transcription factor 4##NM_001083962|TCF4|6925|transcription factor 4##NM_001243230|TCF4|6925|transcription factor 4##NM_003199|TCF4|6925|transcription factor 4##AB209263|TXNL1|9352|thioredoxin-like 1##DQ891846|TXNL1|9352|thioredoxin-like 1##DQ895034|TXNL1|9352|thioredoxin-like 1##EU176640|TXNL1|9352|thioredoxin-like 1##AF051896|TXNL1|9352|thioredoxin-like 1##AF052659|TXNL1|9352|thioredoxin-like 1##AK313653|TXNL1|9352|thioredoxin-like 1##BC001156|TXNL1|9352|thioredoxin-like 1##AF003938|TXNL1|9352|thioredoxin-like 1##NM_004786|TXNL1|9352|thioredoxin-like 1##AK057141|WDR7|23335|WD repeat domain 7##NM_015285|WDR7|23335|WD repeat domain 7##NM_052834|WDR7|23335|WD repeat domain 7##AB011113|WDR7|23335|WD repeat domain 7##BC150282|WDR7|23335|WD repeat domain 7	0.0	
chr18	67726197	67726325	reg1032185.p1	3.727	+	GU935335 GU935336 U56102 NM_006566	-102066	-	AK313199 TSC_hg19_v1_chr18_-_67615110	-111162	-	TSC_hg19_v1_chr18_+_67068214 NM_152721 AY599248 BC096744	-658031	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	146677	-	NM_004232 TSC_hg19_v1_chr18_+_67956194	229906	+	TSC_hg19_v1_chr18_+_67956280 BC020082	230000	+	GU935335|CD226|10666|CD226 molecule##GU935336|CD226|10666|CD226 molecule##U56102|CD226|10666|CD226 molecule##NM_006566|CD226|10666|CD226 molecule##AK313199|CD226|10666|CD226 molecule##NM_152721|DOK6|220164|docking protein 6##AY599248|DOK6|220164|docking protein 6##BC096744|DOK6|220164|docking protein 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC020082|SOCS6|9306|suppressor of cytokine signaling 6	0.0	
chr2	219761310	219761408	reg1035857.p1	3.727	+	BC052234 AK024363 NM_025216 BC040026	-16096	+	AY009401 NM_006522 AK075522 AB059570 DQ890770 BC004329 AB590154 BT007456	-36707	+	AJ249977 BC098102 BC098255 BC098277 BC098306 NM_017431 AK300078 AK300687 AK309865	-64841	-	TSC_hg19_v1_chr2_+_219824381 BC041771 NM_003936 U34051	63050	+	BC023511 NM_017521 Y08976	88966	-	AF166331 NM_005209 BC006285 NM_057093 NM_057094	96764	-	BC052234|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AK024363|WNT10A|80326|wingless-type MMTV integration site family, member 10A##NM_025216|WNT10A|80326|wingless-type MMTV integration site family, member 10A##BC040026|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AY009401|WNT6|7475|wingless-type MMTV integration site family, member 6##NM_006522|WNT6|7475|wingless-type MMTV integration site family, member 6##AK075522|WNT6|7475|wingless-type MMTV integration site family, member 6##AB059570|WNT6|7475|wingless-type MMTV integration site family, member 6##DQ890770|WNT6|7475|wingless-type MMTV integration site family, member 6##BC004329|WNT6|7475|wingless-type MMTV integration site family, member 6##BT007456|WNT6|7475|wingless-type MMTV integration site family, member 6##AJ249977|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098102|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098255|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098277|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098306|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##NM_017431|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300078|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300687|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK309865|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC041771|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##NM_003936|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##U34051|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##BC023511|FEV|54738|FEV (ETS oncogene family)##NM_017521|FEV|54738|FEV (ETS oncogene family)##Y08976|FEV|54738|FEV (ETS oncogene family)##AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2	0.0	
chr4	2957186	2957315	reg1027429.p3	3.727	+	TSC_hg19_v1_chr4_+_2936642 AK054619 BC020978 BC032331 BC041605	-20596	+	TSC_hg19_v1_chr4_-_2936577 NM_001146069	-20675	-	TSC_hg19_v1_chr4_-_2936515 BC001502 BC014979	-20763	-	TSC_hg19_v1_chr4_-_2965083 CU693114 BC026035	7813	-	TSC_hg19_v1_chr4_-_2965091 AF040965	7848	-	BC053635 TSC_hg19_v1_chr4_-_2965134 BC017358 NM_003703	7873	-	BC020978|C4orf10|317648|chromosome 4 open reading frame 10##BC041605|C4orf10|317648|chromosome 4 open reading frame 10##NM_001146069|MFSD10|10227|major facilitator superfamily domain containing 10##BC001502|MFSD10|10227|major facilitator superfamily domain containing 10##BC014979|MFSD10|10227|major facilitator superfamily domain containing 10##BC026035|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##AF040965|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC053635|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC017358|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##NM_003703|NOP14|8602|NOP14 nucleolar protein homolog (yeast)	0.030727	
chr6	16712603	16712730	reg1037436.p2	3.727	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-473815	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-569356	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-583229	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	49031	-	NM_001190766	389822	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	569188	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.0	
chr7	44503144	44503286	reg1041438.p1	3.727	+	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	-137924	-	TSC_hg19_v1_chr7_+_44240639 BC007319 AF091079 U95735 DQ890653 DQ893833 CU675611 AB451317 AB451447 BT007078 CR456989 CR542008	-262529	+	TSC_hg19_v1_chr7_+_44240631 AK223488	-262595	+	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	27066	-	AY437865 AY515256 FJ481111 TSC_hg19_v1_chr7_-_44580901 BC117178 BC143731 BC143756 AF192522 AF192523 NM_001101648 NM_013389	77670	-	TSC_hg19_v1_chr7_-_44613508 CR457213 DQ891215 DQ894398 AB385026 AL136700 AK022774 AK309276 BC001235 AK222662 AK315363 AF247666 AJ131712	110316	-	AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC007319|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AF091079|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##U95735|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ890653|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ893833|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451317|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451447|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BT007078|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR456989|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR542008|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK223488|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3##AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##CR457213|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##DQ891215|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##DQ894398|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AL136700|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK022774|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK309276|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##BC001235|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK222662|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AK315363|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AF247666|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56##AJ131712|DDX56|54606|DEAD (Asp-Glu-Ala-Asp) box polypeptide 56	0.0	
chr8	100878186	100878279	reg1039462.p1	3.727	+	TSC_hg19_v1_chr8_+_100025537 BC094749	-852642	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	-852720	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	-852737	+	TSC_hg19_v1_chr8_-_100905892 X13238	27647	-	TSC_hg19_v1_chr8_-_100905910 AK311791	27689	-	NM_004374	28009	-	BC094749|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##X13238|COX6C|1345|cytochrome c oxidase subunit VIc##AK311791|COX6C|1345|cytochrome c oxidase subunit VIc##NM_004374|COX6C|1345|cytochrome c oxidase subunit VIc	0.013202	
chr8	128223300	128223397	reg1033252.p1	3.727	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-652624	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-652793	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1259935	-	DQ486513 NM_001159542	204508	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	524977	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	525142	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.0	
chrY	1652160	1652263	reg1035166.p2	3.727	+	BC043610 GQ280263 NM_178129 AK126147	-46173	-	AK301844 NM_001173473	-129560	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-130410	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	8318	+	NM_004043 U11090	12136	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	31792	+	BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase	0.665795	CTCF.p2:21:0.666
chr1	108043984	108044092	reg1040160.p1	3.726	+	AB023193 TSC_hg19_v1_chr1_+_107683657	-360434	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-361296	+	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	-444673	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	187086	-	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	463562	-	AJ619961 NM_213651 AK292567	691358	-	AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.787253	CTCF.p2:-1:0.787
chr11	128366872	128366938	reg1029758.p1	3.726	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1493600	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1496180	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1496245	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	25058	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	25229	-	BX640634 NM_001143820	90547	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.0	
chr14	68943110	68943231	reg1022538.p1	3.726	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-656650	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-659871	-	AK315462 NM_152443	-774568	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	316550	-	NM_001244698 NM_004926	317460	-	NM_001244701 AB528867	319814	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr16	17107588	17107741	reg1030102.p1	3.726	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-781134	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-781176	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-781182	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	457141	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1465727	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1690432	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr16	31356091	31356248	reg1037322.p1	3.726	+	TSC_hg19_v1_chr16_+_31271330 AK127637 AB384734	-84815	+	TSC_hg19_v1_chr16_+_31271311 J03925 BC096346 BC096347 BC096348 BC099660	-84852	+	TSC_hg19_v1_chr16_+_31271295 AK057856 NM_000632 NM_001145808 M18044	-84876	+	TSC_hg19_v1_chr16_+_31366508 AK296666 AK309642 NM_000887	10323	+	TSC_hg19_v1_chr16_+_31366521 M81695	10353	+	TSC_hg19_v1_chr16_+_31366549 BC037577 BC038237 DQ892486 DQ895697	10382	+	AK127637|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##J03925|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096346|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096347|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096348|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC099660|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##AK057856|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##NM_000632|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##NM_001145808|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##M18044|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##AK296666|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##AK309642|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##NM_000887|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##M81695|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##BC037577|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##BC038237|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ892486|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ895697|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)	0.0	
chr16	80660856	80660931	reg1034287.p1	3.726	+	AF125108 NM_130897 BC054892 BC035232	-86005	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-1026278	-	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-2527438	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	177154	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	379191	+	TSC_hg19_v1_chr16_+_81040132 BC007334	379250	+	AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N##BC007334|CENPN|55839|centromere protein N	0.0	
chr17	2304423	2304491	reg1035029.p1	3.726	+	X96401 NM_020310 TSC_hg19_v1_chr17_-_2304355 AK291596	-141	-	TSC_hg19_v1_chr17_+_2240796 NM_014853 AB007857 NM_001098509 BC039204 AK294955 AB275762 AB385325 AB449878 AK304263	-63555	+	NM_018128 AB037822	-63719	-	TSC_hg19_v1_chr17_-_2415189 BX647255 AK294547 BC050603 BC001213 AL832612 AK027410 AK296464 NM_024086	110688	-	TSC_hg19_v1_chr17_+_2496944 NM_000430 L13386	192513	+	TSC_hg19_v1_chr17_+_2497263 BX538346 AK313078 L13385 BC064638	192801	+	X96401|MNT|4335|MAX binding protein##NM_020310|MNT|4335|MAX binding protein##AK291596|MNT|4335|MAX binding protein##NM_014853|SGSM2|9905|small G protein signaling modulator 2##AB007857|SGSM2|9905|small G protein signaling modulator 2##NM_001098509|SGSM2|9905|small G protein signaling modulator 2##BC039204|SGSM2|9905|small G protein signaling modulator 2##AK294955|SGSM2|9905|small G protein signaling modulator 2##AB275762|SGSM2|9905|small G protein signaling modulator 2##AB449878|SGSM2|9905|small G protein signaling modulator 2##AK304263|SGSM2|9905|small G protein signaling modulator 2##NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##BX647255|METTL16|79066|methyltransferase like 16##AK294547|METTL16|79066|methyltransferase like 16##BC050603|METTL16|79066|methyltransferase like 16##BC001213|METTL16|79066|methyltransferase like 16##AL832612|METTL16|79066|methyltransferase like 16##AK027410|METTL16|79066|methyltransferase like 16##AK296464|METTL16|79066|methyltransferase like 16##NM_024086|METTL16|79066|methyltransferase like 16##NM_000430|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13386|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BX538346|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##AK313078|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13385|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##BC064638|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	0.033088	
chr19	19932429	19932550	reg1035356.p2	3.726	+	BC034236 AK289657 TSC_hg19_v1_chr19_-_19887212 BC037856	-45284	-	AB464375 BC136323 AB021644 AK074832 TSC_hg19_v1_chr19_-_19843919 AK125668 NM_021030	-88642	-	AK097169 BC094808 AY149174 NM_033204 BC119680 BC119681	-152832	+	TSC_hg19_v1_chr19_-_19932557 AL136548 BC018100 BC034920 AK122848 AK095575 NM_001099269 NM_001145404	63	-	TSC_hg19_v1_chr19_+_19976658 BC053607 BC014148 NM_021047 BC065572 AK074757 BC125063 BC125064	44195	+	TSC_hg19_v1_chr19_+_20011754 NM_031218 BC020837 BC070372 BC107581 AK096342 BC058821 BC038096 BC136718 BC136719	79295	+	BC034236|LOC284440|284440|uncharacterized LOC284440##AK289657|LOC284440|284440|uncharacterized LOC284440##BC037856|LOC284440|284440|uncharacterized LOC284440##BC136323|ZNF14|7561|zinc finger protein 14##AB021644|ZNF14|7561|zinc finger protein 14##AK074832|ZNF14|7561|zinc finger protein 14##NM_021030|ZNF14|7561|zinc finger protein 14##AK097169|ZNF101|94039|zinc finger protein 101##BC094808|ZNF101|94039|zinc finger protein 101##AY149174|ZNF101|94039|zinc finger protein 101##NM_033204|ZNF101|94039|zinc finger protein 101##BC119680|ZNF101|94039|zinc finger protein 101##BC119681|ZNF101|94039|zinc finger protein 101##AL136548|ZNF506|440515|zinc finger protein 506##BC018100|ZNF506|440515|zinc finger protein 506##BC034920|ZNF506|440515|zinc finger protein 506##AK122848|ZNF506|440515|zinc finger protein 506##AK095575|ZNF506|440515|zinc finger protein 506##NM_001099269|ZNF506|440515|zinc finger protein 506##NM_001145404|ZNF506|440515|zinc finger protein 506##BC053607|ZNF253|56242|zinc finger protein 253##BC014148|ZNF253|56242|zinc finger protein 253##NM_021047|ZNF253|56242|zinc finger protein 253##BC065572|ZNF253|56242|zinc finger protein 253##AK074757|ZNF253|56242|zinc finger protein 253##BC125063|ZNF253|56242|zinc finger protein 253##BC125064|ZNF253|56242|zinc finger protein 253##NM_031218|ZNF93|81931|zinc finger protein 93##BC020837|ZNF93|81931|zinc finger protein 93##BC070372|ZNF93|81931|zinc finger protein 93##BC107581|ZNF93|81931|zinc finger protein 93##AK096342|ZNF93|81931|zinc finger protein 93##BC058821|ZNF93|81931|zinc finger protein 93##BC038096|ZNF93|81931|zinc finger protein 93##BC136718|ZNF93|81931|zinc finger protein 93##BC136719|ZNF93|81931|zinc finger protein 93	0.0	
chr19	56425191	56425323	reg1039529.p1	3.726	+	BC036506 NM_145007 AK097646	-77111	-	AK315003 NM_134444	-77314	+	NM_001145014	-154751	+	AB527194 AY154468 NM_176810	18431	-	NM_176811 AB527377 AY154463	33975	+	AB527195 AY054986 AY154460 NM_153447	85833	+	BC036506|NLRP11|204801|NLR family, pyrin domain containing 11##NM_145007|NLRP11|204801|NLR family, pyrin domain containing 11##AK315003|NLRP4|147945|NLR family, pyrin domain containing 4##NM_134444|NLRP4|147945|NLR family, pyrin domain containing 4##NM_001145014|RFPL4A|342931|ret finger protein-like 4A##AY154468|NLRP13|126204|NLR family, pyrin domain containing 13##NM_176810|NLRP13|126204|NLR family, pyrin domain containing 13##NM_176811|NLRP8|126205|NLR family, pyrin domain containing 8##AY154463|NLRP8|126205|NLR family, pyrin domain containing 8##AY054986|NLRP5|126206|NLR family, pyrin domain containing 5##AY154460|NLRP5|126206|NLR family, pyrin domain containing 5##NM_153447|NLRP5|126206|NLR family, pyrin domain containing 5	0.851586	CTCF.p2:-8:0.852
chr20	5627857	5627943	reg1034094.p1	3.726	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	-36313	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-332864	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-520205	+	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	103166	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	264226	+	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	303223	-	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	0.0	
chr6	16471876	16471956	reg1029341.p2	3.726	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-233065	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-328606	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-342479	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	289781	-	NM_001190766	630572	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	809938	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.0	
chr6	44225711	44225828	reg1023653.p2	3.726	+	AK307572 AY491520 DQ893314 DQ896628 DQ896632 EU176354 AB106538 TSC_hg19_v1_chr6_-_44225250 AK075456 AB097021 AB097039 AK123749 AK293344 BC024288 AK293251 NM_178148	-604	-	BC014485 TSC_hg19_v1_chr6_+_44214855 BC007327 AL136543	-10896	+	TSC_hg19_v1_chr6_+_44214837 BC068474 AK312255 AY359878 BC016753 AK294643 AK297367 D28342 BX649079 BC004928 BC012807 M16660 NM_007355	-10952	+	TSC_hg19_v1_chr6_-_44233257 BC011676 BC063609 AK301360	7495	-	AB590964 NM_004556 U91616	7742	-	NM_001137560 TSC_hg19_v1_chr6_+_44238533 BC040881	12762	+	AK307572|SLC35B2|347734|solute carrier family 35, member B2##AY491520|SLC35B2|347734|solute carrier family 35, member B2##DQ893314|SLC35B2|347734|solute carrier family 35, member B2##DQ896628|SLC35B2|347734|solute carrier family 35, member B2##DQ896632|SLC35B2|347734|solute carrier family 35, member B2##EU176354|SLC35B2|347734|solute carrier family 35, member B2##AB106538|SLC35B2|347734|solute carrier family 35, member B2##AK075456|SLC35B2|347734|solute carrier family 35, member B2##AB097021|SLC35B2|347734|solute carrier family 35, member B2##AB097039|SLC35B2|347734|solute carrier family 35, member B2##AK123749|SLC35B2|347734|solute carrier family 35, member B2##AK293344|SLC35B2|347734|solute carrier family 35, member B2##BC024288|SLC35B2|347734|solute carrier family 35, member B2##AK293251|SLC35B2|347734|solute carrier family 35, member B2##NM_178148|SLC35B2|347734|solute carrier family 35, member B2##BC014485|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC007327|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AL136543|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC068474|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK312255|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AY359878|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC016753|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK294643|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##AK297367|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BX649079|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC004928|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC012807|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##M16660|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##NM_007355|HSP90AB1|3326|heat shock protein 90kDa alpha (cytosolic), class B member 1##BC011676|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##BC063609|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##AK301360|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##NM_004556|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##U91616|NFKBIE|4794|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon##NM_001137560|TMEM151B|441151|transmembrane protein 151B	0.0	
chr6	83326470	83326571	reg1036549.p1	3.726	+	TSC_hg19_v1_chr6_+_83073996 AK074790 NM_001166392	-252543	+	TSC_hg19_v1_chr6_+_83073565 BC037161 AK074786	-252987	+	AK291170 NM_006670	-253598	+	TSC_hg19_v1_chr6_-_83775541 BC101512 BC101538 BC143617 BC036049 AB126062 NM_198920 BC053645 AK298205 BC057845	449005	-	TSC_hg19_v1_chr6_+_83777389 BX648667 NM_001199942 NM_015018 AK094766	450877	+	AF102265 AB032081 AF180371 TSC_hg19_v1_chr6_-_83902977 AK314512 AK225363 AK001365 AK023432 BC001258 NM_001199918 NM_001199919 NM_015599	576452	-	AK074790|TPBG|7162|trophoblast glycoprotein##NM_001166392|TPBG|7162|trophoblast glycoprotein##BC037161|TPBG|7162|trophoblast glycoprotein##AK074786|TPBG|7162|trophoblast glycoprotein##AK291170|TPBG|7162|trophoblast glycoprotein##NM_006670|TPBG|7162|trophoblast glycoprotein##BC101512|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC101538|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC143617|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC036049|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AB126062|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##NM_198920|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC053645|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##AK298205|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BC057845|UBE2CBP|90025|ubiquitin-conjugating enzyme E2C binding protein##BX648667|DOPEY1|23033|dopey family member 1##NM_001199942|DOPEY1|23033|dopey family member 1##NM_015018|DOPEY1|23033|dopey family member 1##AK094766|DOPEY1|23033|dopey family member 1##AF102265|PGM3|5238|phosphoglucomutase 3##AB032081|PGM3|5238|phosphoglucomutase 3##AF180371|PGM3|5238|phosphoglucomutase 3##AK314512|PGM3|5238|phosphoglucomutase 3##AK225363|PGM3|5238|phosphoglucomutase 3##AK001365|PGM3|5238|phosphoglucomutase 3##AK023432|PGM3|5238|phosphoglucomutase 3##BC001258|PGM3|5238|phosphoglucomutase 3##NM_001199918|PGM3|5238|phosphoglucomutase 3##NM_001199919|PGM3|5238|phosphoglucomutase 3##NM_015599|PGM3|5238|phosphoglucomutase 3	0.0	
chr8	79305779	79305920	reg1044080.p1	3.726	+	NM_001172086 NM_001172087	-1392570	-	BC000661 BC093043 TSC_hg19_v1_chr8_-_77912318 BC005375 M85038 AK312997 M86852 NM_000318 NM_001079867	-1393440	-	AK131399 TSC_hg19_v1_chr8_+_77765961	-1539960	+	NM_006823 NM_181839 S76965	122486	+	TSC_hg19_v1_chr8_+_79578323 NM_016010 AK024711 AK313723 AF151820 BC009074 BC035905 CU679245	272471	+	J04156 BC032487 AK226000 BC047698 AK291538 NM_000880 NM_001199886 NM_001199887 NM_001199888	411799	-	NM_001172086|PEX2|5828|peroxisomal biogenesis factor 2##NM_001172087|PEX2|5828|peroxisomal biogenesis factor 2##BC000661|PEX2|5828|peroxisomal biogenesis factor 2##BC093043|PEX2|5828|peroxisomal biogenesis factor 2##BC005375|PEX2|5828|peroxisomal biogenesis factor 2##M85038|PEX2|5828|peroxisomal biogenesis factor 2##AK312997|PEX2|5828|peroxisomal biogenesis factor 2##M86852|PEX2|5828|peroxisomal biogenesis factor 2##NM_000318|PEX2|5828|peroxisomal biogenesis factor 2##NM_001079867|PEX2|5828|peroxisomal biogenesis factor 2##AK131399|ZFHX4|79776|zinc finger homeobox 4##NM_006823|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_181839|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##S76965|PKIA|5569|protein kinase (cAMP-dependent, catalytic) inhibitor alpha##NM_016010|FAM164A|51101|family with sequence similarity 164, member A##AK024711|FAM164A|51101|family with sequence similarity 164, member A##AK313723|FAM164A|51101|family with sequence similarity 164, member A##AF151820|FAM164A|51101|family with sequence similarity 164, member A##BC009074|FAM164A|51101|family with sequence similarity 164, member A##BC035905|FAM164A|51101|family with sequence similarity 164, member A##J04156|IL7|3574|interleukin 7##BC032487|IL7|3574|interleukin 7##AK226000|IL7|3574|interleukin 7##BC047698|IL7|3574|interleukin 7##AK291538|IL7|3574|interleukin 7##NM_000880|IL7|3574|interleukin 7##NM_001199886|IL7|3574|interleukin 7##NM_001199887|IL7|3574|interleukin 7##NM_001199888|IL7|3574|interleukin 7	0.997145	CTCF.p2:3:0.997
chr8	81395113	81395293	reg1038941.p2	3.726	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-311433	-	AF202897 EF152584 NM_001025252 GQ499324 GQ499325 GQ499326 GQ499327 GQ499328	-402174	-	AF070663 TSC_hg19_v1_chr8_-_80942495 AK026506 AK223069 AK315739 BC010150 NM_014018	-452701	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	3281	+	AK131274 NM_001033723	391812	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	629111	-	BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AF202897|TPD52|7163|tumor protein D52##EF152584|TPD52|7163|tumor protein D52##NM_001025252|TPD52|7163|tumor protein D52##GQ499324|TPD52|7163|tumor protein D52##GQ499325|TPD52|7163|tumor protein D52##GQ499326|TPD52|7163|tumor protein D52##GQ499327|TPD52|7163|tumor protein D52##GQ499328|TPD52|7163|tumor protein D52##AF070663|MRPS28|28957|mitochondrial ribosomal protein S28##AK026506|MRPS28|28957|mitochondrial ribosomal protein S28##AK223069|MRPS28|28957|mitochondrial ribosomal protein S28##AK315739|MRPS28|28957|mitochondrial ribosomal protein S28##BC010150|MRPS28|28957|mitochondrial ribosomal protein S28##NM_014018|MRPS28|28957|mitochondrial ribosomal protein S28##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1	0.0	
chr1	147099192	147099373	reg1002168.p1	3.725	+	NM_004326 Y13620 AK298105 TSC_hg19_v1_chr1_+_147013319	-86031	+	TSC_hg19_v1_chr1_+_146714335 AK298424 AK297135 BC077717 AK293157 BC001171 AF054177 BC043501 BC053354 BC005038	-384918	+	NM_004284 TSC_hg19_v1_chr1_+_146714333 EF560738 AF537213 AK001342 AK027631 AK307400	-384971	+	AY358552 BC011644 AK000657 AK308593 AK310693 AB209248 AB030039 AB031478 BC009965 BC034686 NM_016361 TSC_hg19_v1_chr1_-_147142646	43212	-	BC013313 NM_181703	133416	-	NM_005266	146201	-	NM_004326|BCL9|607|B-cell CLL/lymphoma 9##Y13620|BCL9|607|B-cell CLL/lymphoma 9##AK298424|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK297135|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC077717|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK293157|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC001171|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF054177|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC043501|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC053354|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##BC005038|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##NM_004284|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##EF560738|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AF537213|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK001342|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK027631|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AK307400|CHD1L|9557|chromodomain helicase DNA binding protein 1-like##AY358552|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC011644|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK000657|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK308593|ACP6|51205|acid phosphatase 6, lysophosphatidic##AK310693|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB209248|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB030039|ACP6|51205|acid phosphatase 6, lysophosphatidic##AB031478|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC009965|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC034686|ACP6|51205|acid phosphatase 6, lysophosphatidic##NM_016361|ACP6|51205|acid phosphatase 6, lysophosphatidic##BC013313|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_181703|GJA5|2702|gap junction protein, alpha 5, 40kDa##NM_005266|GJA5|2702|gap junction protein, alpha 5, 40kDa	0.0	
chr11	77530559	77530710	reg1033135.p1	3.725	+	AB590787 AF026003 BT019907 AF005422 BC119634 BC119635 TSC_hg19_v1_chr11_-_77348840 U53454 AK315259 X91788 NM_001293	-181820	-	BC040443 NM_173039 TSC_hg19_v1_chr11_+_77300718 AB028147	-229934	+	TSC_hg19_v1_chr11_-_77184767 U51120 BC050377 BC109298 BC109299 AK293098 U24152 NM_001128620 NM_002576	-345802	-	AF380176 AB527448 TSC_hg19_v1_chr11_-_77531769 BC015360 NM_016578 AK098130	1198	-	TSC_hg19_v1_chr11_+_77532238 AF092136 AK024688 BC002752 NM_024684	1569	+	AL834171 EU446555 TSC_hg19_v1_chr11_-_77705710 CU679559 AK000455 BC018672	175050	-	AF026003|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BT019907|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AF005422|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119634|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC119635|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##U53454|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##AK315259|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##X91788|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##NM_001293|CLNS1A|1207|chloride channel, nucleotide-sensitive, 1A##BC040443|AQP11|282679|aquaporin 11##NM_173039|AQP11|282679|aquaporin 11##AB028147|AQP11|282679|aquaporin 11##U51120|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC050377|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109298|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##BC109299|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AK293098|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##U24152|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_001128620|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##NM_002576|PAK1|5058|p21 protein (Cdc42/Rac)-activated kinase 1##AF380176|RSF1|51773|remodeling and spacing factor 1##BC015360|RSF1|51773|remodeling and spacing factor 1##NM_016578|RSF1|51773|remodeling and spacing factor 1##AF092136|C11orf67|28971|chromosome 11 open reading frame 67##AK024688|C11orf67|28971|chromosome 11 open reading frame 67##BC002752|C11orf67|28971|chromosome 11 open reading frame 67##NM_024684|C11orf67|28971|chromosome 11 open reading frame 67##AL834171|INTS4|92105|integrator complex subunit 4##EU446555|INTS4|92105|integrator complex subunit 4##AK000455|INTS4|92105|integrator complex subunit 4##BC018672|INTS4|92105|integrator complex subunit 4	0.0	
chr1	235580692	235580769	reg1008250.p2	3.725	+	TSC_hg19_v1_chr1_+_235530768 AK093397 AK292287 BC008654	-49958	+	NM_001079515 NM_003193 TSC_hg19_v1_chr1_+_235530744 AK296185 AK298050	-49987	+	AK309831 TSC_hg19_v1_chr1_+_235492306	-88435	+	TSC_hg19_v1_chr1_-_235667473 AK091497	86779	-	TSC_hg19_v1_chr1_-_235667723 BC016974 AK130297	87003	-	BC029564 NM_152490 TSC_hg19_v1_chr1_-_235667782	87051	-	AK093397|TBCE|6905|tubulin folding cofactor E##AK292287|TBCE|6905|tubulin folding cofactor E##BC008654|TBCE|6905|tubulin folding cofactor E##NM_001079515|TBCE|6905|tubulin folding cofactor E##NM_003193|TBCE|6905|tubulin folding cofactor E##AK296185|TBCE|6905|tubulin folding cofactor E##AK298050|TBCE|6905|tubulin folding cofactor E##AK091497|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##BC016974|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##AK130297|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##BC029564|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_152490|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2	0.0	
chr14	25900849	25900947	reg1033173.p1	3.725	+	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	-381660	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-797480	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-822037	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1166090	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	3335330	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	3336015	+	BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1	0.997398	CTCF.p2:-25:0.997
chr20	59804288	59804453	reg1043335.p1	3.725	+	TSC_hg19_v1_chr20_+_58713521 AK309218 AK092805 AX747739	-1090836	+	TSC_hg19_v1_chr20_+_58630979 AK091179 AX746831 NM_173644	-1173375	+	BC062570 NM_021810 AK074477	-1232948	+	TSC_hg19_v1_chr20_+_59827453 BC101651 BC112150 NM_001794 AK315192 L34059	23135	+	AK308345 NM_001252338	270106	+	NM_001252339 AK124724	370454	+	AK092805|LOC284757|284757|uncharacterized LOC284757##AK091179|C20orf197|284756|chromosome 20 open reading frame 197##NM_173644|C20orf197|284756|chromosome 20 open reading frame 197##BC062570|CDH26|60437|cadherin 26##NM_021810|CDH26|60437|cadherin 26##AK074477|CDH26|60437|cadherin 26##BC101651|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##BC112150|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001794|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK315192|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##L34059|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK308345|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252338|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##NM_001252339|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)##AK124724|CDH4|1002|cadherin 4, type 1, R-cadherin (retinal)	0.932802	CTCF.p2:18:0.933
chr7	148790514	148790630	reg1026079.p2	3.725	+	TSC_hg19_v1_chr7_-_148787872 NM_152411	-2672	-	TSC_hg19_v1_chr7_-_148787844 BX647929 AK095701	-2739	-	AB463377 AM392873 AM392921 TSC_hg19_v1_chr7_-_148787811 BC109245 BC128392 AL834510 AK297472	-2800	-	TSC_hg19_v1_chr7_-_148823339 AK125575 BC125189 AK056498 AY621067	32765	-	TSC_hg19_v1_chr7_-_148823395 NM_001001661	32841	-	TSC_hg19_v1_chr7_+_148823499 AY049743 NM_020781	32930	+	NM_152411|ZNF786|136051|zinc finger protein 786##BX647929|ZNF786|136051|zinc finger protein 786##AK095701|ZNF786|136051|zinc finger protein 786##AM392873|ZNF786|136051|zinc finger protein 786##AM392921|ZNF786|136051|zinc finger protein 786##BC109245|ZNF786|136051|zinc finger protein 786##BC128392|ZNF786|136051|zinc finger protein 786##AL834510|ZNF786|136051|zinc finger protein 786##AK297472|ZNF786|136051|zinc finger protein 786##BC125189|ZNF425|155054|zinc finger protein 425##AK056498|ZNF425|155054|zinc finger protein 425##AY621067|ZNF425|155054|zinc finger protein 425##NM_001001661|ZNF425|155054|zinc finger protein 425##AY049743|ZNF398|57541|zinc finger protein 398##NM_020781|ZNF398|57541|zinc finger protein 398	0.0	
chr7	44677888	44677981	reg1035817.p1	3.725	+	TSC_hg19_v1_chr7_+_44646225 D10523 BC004964 BC014617	-31706	+	TSC_hg19_v1_chr7_+_44646197 AK314179	-31737	+	AK304439 TSC_hg19_v1_chr7_+_44646190	-31742	+	TSC_hg19_v1_chr7_+_44788175 BC110435	110248	+	TSC_hg19_v1_chr7_+_44788465 AK090415 NM_031449	110557	+	NM_174929 BC131780 BC016968 AY426594 AF357908	117883	+	D10523|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC004964|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC014617|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##AK314179|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##AK304439|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2##NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2##NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2	0.0	
chr7	73703486	73703613	reg1031858.p2	3.725	+	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	-34813	-	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	-34838	-	TSC_hg19_v1_chr7_+_73624361 AF252613	-79195	+	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	238	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	164615	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	164759	+	NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AF252613|LAT2|7462|linker for activation of T cells family, member 2##AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1	0.0	
chr8	101527561	101527742	reg1038007.p2	3.725	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-205366	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-205470	-	AB271913 AB271914 AB029316 NM_015435	-212180	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	44289	-	AK093906 AX748361 NM_152628	134241	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	206155	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr9	130789103	130789284	reg1027871.p2	3.725	+	TSC_hg19_v1_chr9_-_130742813 AK058004 NM_001035254	-46384	-	BC137087 BC137088 BC047949 NM_203305 BC142952	-76262	-	BC015233 NM_003863	-88431	-	AK122729 NM_197956	40405	-	TSC_hg19_v1_chr9_+_130830492 AK290991 NM_001006641	41290	+	AJ619990 TSC_hg19_v1_chr9_+_130830643	41426	+	AK058004|FAM102A|399665|family with sequence similarity 102, member A##NM_001035254|FAM102A|399665|family with sequence similarity 102, member A##BC137087|FAM102A|399665|family with sequence similarity 102, member A##BC137088|FAM102A|399665|family with sequence similarity 102, member A##BC047949|FAM102A|399665|family with sequence similarity 102, member A##NM_203305|FAM102A|399665|family with sequence similarity 102, member A##BC142952|FAM102A|399665|family with sequence similarity 102, member A##BC015233|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##NM_003863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1##AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	0.0	
chr10	6342111	6342291	reg1037651.p1	3.724	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-97325	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-155289	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-155317	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	280060	-	TSC_hg19_v1_chr10_+_6622460 AY007155	280279	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	1109049	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.0	
chr1	10003163	10003343	reg1010206.p2	3.724	+	BC063443 NM_032368	-428	-	TSC_hg19_v1_chr1_-_9970314 AB021262 BC035794 BC014300 NM_001012329 NM_020248	-32944	-	AF438482 NM_001009566 NM_014944 AB020718	-118687	-	TSC_hg19_v1_chr1_-_10003358 AB060688 BC007240 AK304348 AK312550	120	-	NM_022787 BC014943 TSC_hg19_v1_chr1_+_10003497 AK026065 AK222920	243	+	TSC_hg19_v1_chr1_+_10003532 AK315640	290	+	BC063443|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##NM_032368|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AB021262|CTNNBIP1|56998|catenin, beta interacting protein 1##BC014300|CTNNBIP1|56998|catenin, beta interacting protein 1##NM_001012329|CTNNBIP1|56998|catenin, beta interacting protein 1##NM_020248|CTNNBIP1|56998|catenin, beta interacting protein 1##AF438482|CLSTN1|22883|calsyntenin 1##NM_001009566|CLSTN1|22883|calsyntenin 1##NM_014944|CLSTN1|22883|calsyntenin 1##AB020718|CLSTN1|22883|calsyntenin 1##AB060688|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##BC007240|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK304348|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##AK312550|LZIC|84328|leucine zipper and CTNNBIP1 domain containing##NM_022787|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##BC014943|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK026065|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK222920|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1##AK315640|NMNAT1|64802|nicotinamide nucleotide adenylyltransferase 1	0.903994	CTCF.p2:8:0.904
chr11	128480936	128481050	reg1031892.p2	3.724	+	BX640634 NM_001143820	-23541	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	-88859	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	-89030	-	TSC_hg19_v1_chr11_+_128563793 NM_001167681 NM_002017	82805	+	TSC_hg19_v1_chr11_+_128563966 AK313370	82968	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	82987	+	BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001167681|FLI1|2313|Friend leukemia virus integration 1##NM_002017|FLI1|2313|Friend leukemia virus integration 1##AK313370|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1	0.0	
chr13	50708435	50708586	reg1041917.p1	3.724	+	TSC_hg19_v1_chr13_-_50699781 AF380424	-8695	-	AJ412023 AJ412024 AJ412025 AJ412026 AJ412038 AJ412039 AJ412054 AJ412055 AJ412056 AJ412057 AJ412058 AJ412059 AJ412060 AJ412061 AJ412062 Y15227 TSC_hg19_v1_chr13_+_50656364 BC004131 AK312167 BC020692 AK095311	-52165	+	TSC_hg19_v1_chr13_-_50656128 BC038090 AF264787 Y15228 BC022349 BC006995 BC026275 BC030971 BC070292 BC055417 BC017819 BC022282	-52361	-	AJ412041 AJ412042 AJ412043 TSC_hg19_v1_chr13_+_50760088	51543	+	AY357595 BC104892 BC112009 NM_198989 AK303567 AK126830	709442	-	NM_001142279 NM_024570 TSC_hg19_v1_chr13_+_51483898	775346	+	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AJ412023|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412024|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412061|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412062|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##Y15227|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC020692|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AK095311|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC038090|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AF264787|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##Y15228|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##BC070292|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##BC055417|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7##AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_001142279|RNASEH2B|79621|ribonuclease H2, subunit B##NM_024570|RNASEH2B|79621|ribonuclease H2, subunit B	0.0	
chr14	75963726	75963849	reg1034721.p1	3.724	+	BC051303 NM_001135049	-64951	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	-68774	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	-69146	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	25003	+	TSC_hg19_v1_chr14_+_75988840 D42106	25065	+	NM_017791 AY260572 AY260577 BC019087 AK000378	81178	+	BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	0.0	
chr14	87427607	87427705	reg1032433.p2	3.724	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-1428071	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-1431115	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-1431183	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	1031807	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	1031903	-	NM_001201402	1032352	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	0.0	
chr1	71546705	71546801	reg1039082.p1	3.724	+	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	-46	-	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	-33374	-	TSC_hg19_v1_chr1_+_70876950 NM_001190463 NM_001902 NM_153742 AK310269 AK303946 AK223376 BC015807 S52028 S52784 EU832313 EU832398 BT006882	-669773	+	NM_005455 NM_203350	218	-	TSC_hg19_v1_chr1_-_72748182 AK295481 BX538014 AK092307 AX747470 NM_173808	1201458	-	TSC_hg19_v1_chr1_-_72748491 AY358132	1201752	-	EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001190463|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001902|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_153742|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK310269|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK303946|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK223376|CTH|1491|cystathionase (cystathionine gamma-lyase)##BC015807|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52028|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52784|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832313|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832398|CTH|1491|cystathionase (cystathionine gamma-lyase)##BT006882|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK295481|NEGR1|257194|neuronal growth regulator 1##BX538014|NEGR1|257194|neuronal growth regulator 1##AK092307|NEGR1|257194|neuronal growth regulator 1##NM_173808|NEGR1|257194|neuronal growth regulator 1	0.0	
chr18	42966376	42966465	reg1031342.p2	3.724	+	NM_001242692 AK292422	-173468	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-705552	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-706306	+	AF349446 NM_007163	228345	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	337684	+	AK127452 TSC_hg19_v1_chr18_+_43304145 AK289608 AK294129 AK295268 U35735 BC040128 BC050539 AF328892	337737	+	NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK127452|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK289608|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK294129|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AK295268|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##U35735|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC040128|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##BC050539|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##AF328892|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.681859	CTCF.p2:14:0.682
chr1	957650	957717	reg1035256.p2	3.724	+	AF016903 U84406 TSC_hg19_v1_chr1_+_955679	-2038	+	TSC_hg19_v1_chr1_+_955536 AB385240	-2140	+	TSC_hg19_v1_chr1_+_955499 AB191264 NM_198576	-2187	+	TSC_hg19_v1_chr1_+_978666 BC084578	21039	+	TSC_hg19_v1_chr1_+_995079 AK310350	37403	+	TSC_hg19_v1_chr1_+_995109 BC033949	37429	+	AF016903|AGRN|375790|agrin##U84406|AGRN|375790|agrin##AB191264|AGRN|375790|agrin##NM_198576|AGRN|375790|agrin##BC084578|AGRN|375790|agrin##AK310350|LOC100288175|100288175|uncharacterized LOC100288175##BC033949|LOC100288175|100288175|uncharacterized LOC100288175	0.014312	
chr2	241630264	241630444	reg1034607.p1	3.724	+	BC157895 BC171912 BC139748 NM_001102467 BC041460	-8039	-	AK314002 NM_005301	-65693	+	TSC_hg19_v1_chr2_+_241544846 NM_001195381 NM_001195382 AK172786 AK290256	-85514	+	AB040748 BC041460 NM_198998	907	+	BC064906 TSC_hg19_v1_chr2_-_241759637 AK307119 AB621817 AB210029 AB290172 NM_001244008 NM_004321	129321	-	NM_000030 X53414 BC132819 D13368 S71388 AK315331 TSC_hg19_v1_chr2_+_241808251 AK292754 AK298420 AB292648 X56092 AF348451 AK298400 AK316495	177914	+	BC157895|AQP12B|653437|aquaporin 12B##BC171912|AQP12B|653437|aquaporin 12B##BC139748|AQP12B|653437|aquaporin 12B##NM_001102467|AQP12B|653437|aquaporin 12B##BC041460|AQP12B|653437|aquaporin 12B##AK314002|GPR35|2859|G protein-coupled receptor 35##NM_005301|GPR35|2859|G protein-coupled receptor 35##NM_001195381|GPR35|2859|G protein-coupled receptor 35##NM_001195382|GPR35|2859|G protein-coupled receptor 35##AK172786|GPR35|2859|G protein-coupled receptor 35##AK290256|GPR35|2859|G protein-coupled receptor 35##AB040748|AQP12A|375318|aquaporin 12A##BC041460|AQP12B|653437|aquaporin 12B##NM_198998|AQP12A|375318|aquaporin 12A##BC064906|KIF1A|547|kinesin family member 1A##AK307119|KIF1A|547|kinesin family member 1A##AB210029|KIF1A|547|kinesin family member 1A##AB290172|KIF1A|547|kinesin family member 1A##NM_001244008|KIF1A|547|kinesin family member 1A##NM_004321|KIF1A|547|kinesin family member 1A##NM_000030|AGXT|189|alanine-glyoxylate aminotransferase##X53414|AGXT|189|alanine-glyoxylate aminotransferase##BC132819|AGXT|189|alanine-glyoxylate aminotransferase##D13368|AGXT|189|alanine-glyoxylate aminotransferase##AK315331|AGXT|189|alanine-glyoxylate aminotransferase##AK292754|AGXT|189|alanine-glyoxylate aminotransferase##AK298420|AGXT|189|alanine-glyoxylate aminotransferase##AB292648|AGXT|189|alanine-glyoxylate aminotransferase##X56092|AGXT|189|alanine-glyoxylate aminotransferase##AF348451|AGXT|189|alanine-glyoxylate aminotransferase##AK298400|AGXT|189|alanine-glyoxylate aminotransferase##AK316495|AGXT|189|alanine-glyoxylate aminotransferase	0.0	
chr2	85788649	85788769	reg1035331.p1	3.724	+	TSC_hg19_v1_chr2_-_85788644 NM_000821 NM_001142269	-54	-	CU680718 DQ892948 DQ896196 EU847509 TSC_hg19_v1_chr2_-_85788597 BC013979 AK310483 AK297397 BC004422 AK222827 AK225663 AK298982 AK313126 M81592	-118	-	TSC_hg19_v1_chr2_+_85766291 AK291126 BC001686 BC001854 X68836 DQ083239 AB529143 CU674832	-22359	+	NM_003761 TSC_hg19_v1_chr2_+_85804673	15940	+	TSC_hg19_v1_chr2_+_85804705 BC001634	15994	+	TSC_hg19_v1_chr2_+_85804738 AF053233	16025	+	NM_000821|GGCX|2677|gamma-glutamyl carboxylase##NM_001142269|GGCX|2677|gamma-glutamyl carboxylase##DQ892948|GGCX|2677|gamma-glutamyl carboxylase##DQ896196|GGCX|2677|gamma-glutamyl carboxylase##EU847509|GGCX|2677|gamma-glutamyl carboxylase##BC013979|GGCX|2677|gamma-glutamyl carboxylase##AK310483|GGCX|2677|gamma-glutamyl carboxylase##AK297397|GGCX|2677|gamma-glutamyl carboxylase##BC004422|GGCX|2677|gamma-glutamyl carboxylase##AK222827|GGCX|2677|gamma-glutamyl carboxylase##AK225663|GGCX|2677|gamma-glutamyl carboxylase##AK298982|GGCX|2677|gamma-glutamyl carboxylase##AK313126|GGCX|2677|gamma-glutamyl carboxylase##M81592|GGCX|2677|gamma-glutamyl carboxylase##AK291126|MAT2A|4144|methionine adenosyltransferase II, alpha##BC001686|MAT2A|4144|methionine adenosyltransferase II, alpha##BC001854|MAT2A|4144|methionine adenosyltransferase II, alpha##X68836|MAT2A|4144|methionine adenosyltransferase II, alpha##DQ083239|MAT2A|4144|methionine adenosyltransferase II, alpha##NM_003761|VAMP8|8673|vesicle-associated membrane protein 8 (endobrevin)##BC001634|VAMP8|8673|vesicle-associated membrane protein 8 (endobrevin)##AF053233|VAMP8|8673|vesicle-associated membrane protein 8 (endobrevin)	0.350892	CTCF.p2:23:0.351
chr3	137768509	137768648	reg1038546.p1	3.724	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	-39575	+	AK098474 NM_001002026 AF349452	-50899	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	-285431	+	AK057406 NM_001170538	63743	-	BC033308 NM_173543 TSC_hg19_v1_chr3_-_137834481	65897	-	BC119639 BC119640 AF141315 AK225668 NM_016161	82597	-	AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK057406|DZIP1L|199221|DAZ interacting protein 1-like##NM_001170538|DZIP1L|199221|DAZ interacting protein 1-like##BC033308|DZIP1L|199221|DAZ interacting protein 1-like##NM_173543|DZIP1L|199221|DAZ interacting protein 1-like##BC119639|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##BC119640|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##AF141315|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##AK225668|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##NM_016161|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase	0.933524	CTCF.p2:0:0.934
chr4	25916075	25916157	reg1033907.p2	3.724	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-252	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-51562	-	NM_001177999 AK314514	-258026	+	L07875 BC020780 NM_005349 NM_203283	405203	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	406193	+	TSC_hg19_v1_chr4_+_26322635 AK302230	406520	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.024347	
chr7	7984357	7984538	reg1031126.p1	3.724	+	BC009868 NM_002947	-226210	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-304074	+	BT007320 AB464142 TSC_hg19_v1_chr7_-_7680067 L07493 BC005264 AK311842	-304360	-	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	23986	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	317269	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	317344	-	BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##BT007320|RPA3|6119|replication protein A3, 14kDa##L07493|RPA3|6119|replication protein A3, 14kDa##BC005264|RPA3|6119|replication protein A3, 14kDa##AK311842|RPA3|6119|replication protein A3, 14kDa##NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr9	114749188	114749369	reg1033065.p1	3.724	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-89811	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-90164	+	AL833535 NM_173521	-203503	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	188242	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	346009	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	346571	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chr9	74061908	74061975	reg1040562.p2	3.724	+	AL136545 TSC_hg19_v1_chr9_-_74061901	-58	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	-325405	-	BC067733 AF325212 AK021788 AK225732 BC094699 NM_001007470 NM_020952 NM_024971 NM_206944 NM_206945 NM_206946 NM_206947 NM_206948 BC142972	-577981	-	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	321637	-	AF151825 TSC_hg19_v1_chr9_-_74525994	463984	-	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	464215	-	AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC067733|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF325212|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK021788|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AK225732|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC094699|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007470|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_020952|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_024971|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206944|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206945|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206946|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206947|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_206948|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC142972|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2##AF151825|FAM108B1|51104|family with sequence similarity 108, member B1##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1	0.0	
chr12	93323351	93323531	reg1033482.p2	3.723	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-343	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-398	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	-503	-	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	448451	+	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	512245	-	TSC_hg19_v1_chr12_-_93835718 D83004	512277	-	NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.087758	
chr15	71185417	71185547	reg1033651.p1	3.723	+	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	-507	+	CU693296 DQ890927 DQ894089 EU176528 AL360202 TSC_hg19_v1_chr15_-_71184737 BC027857 BC072414 AK313472 NM_020147	-791	-	CU675231 BC006082 BC009446 BC014018 AL833876 BC039153 TSC_hg19_v1_chr15_-_71146496 AK130092 AF443828 AF443829 AK002058 NM_018357 NM_197958	-39014	-	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	222389	-	NM_024817 BC140868	248328	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	654098	+	BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49##DQ890927|THAP10|56906|THAP domain containing 10##DQ894089|THAP10|56906|THAP domain containing 10##EU176528|THAP10|56906|THAP domain containing 10##AL360202|THAP10|56906|THAP domain containing 10##BC027857|THAP10|56906|THAP domain containing 10##BC072414|THAP10|56906|THAP domain containing 10##AK313472|THAP10|56906|THAP domain containing 10##NM_020147|THAP10|56906|THAP domain containing 10##BC006082|LARP6|55323|La ribonucleoprotein domain family, member 6##BC009446|LARP6|55323|La ribonucleoprotein domain family, member 6##BC014018|LARP6|55323|La ribonucleoprotein domain family, member 6##AL833876|LARP6|55323|La ribonucleoprotein domain family, member 6##BC039153|LARP6|55323|La ribonucleoprotein domain family, member 6##AK130092|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443828|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443829|LARP6|55323|La ribonucleoprotein domain family, member 6##AK002058|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_018357|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_197958|LARP6|55323|La ribonucleoprotein domain family, member 6##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4	0.820237	CTCF.p2:18:0.820
chr16	29674624	29674726	reg1043246.p2	3.723	+	TSC_hg19_v1_chr16_+_29674568 J04168 J04536 NM_003123	-102	+	TSC_hg19_v1_chr16_+_29674567 AK292626 AK313750	-110	+	TSC_hg19_v1_chr16_+_29674283 NM_001030288 X60502 BC012350	-343	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	339	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	15719	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	15807	+	J04536|SPN|6693|sialophorin##NM_003123|SPN|6693|sialophorin##AK292626|SPN|6693|sialophorin##AK313750|SPN|6693|sialophorin##NM_001030288|SPN|6693|sialophorin##X60502|SPN|6693|sialophorin##BC012350|SPN|6693|sialophorin##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase	0.02246	
chr16	68109105	68109214	reg1038638.p2	3.723	+	NM_018380	-51390	-	AK290578 TSC_hg19_v1_chr16_+_68057186 AB101210 AK296663 AK000406 BC006527 NM_017803	-51984	+	TSC_hg19_v1_chr16_-_68057129 BC014517	-52031	-	TSC_hg19_v1_chr16_+_68119279 NM_004555 NM_173163 NM_173165	10095	+	TSC_hg19_v1_chr16_+_68119335 AB209824	10179	+	TSC_hg19_v1_chr16_+_68119350 L41067	10210	+	NM_018380|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##AK290578|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AB101210|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK296663|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK000406|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC006527|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##NM_017803|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC014517|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##NM_004555|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173163|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173165|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##AB209824|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##L41067|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	0.0	
chr18	21939648	21939829	reg1006435.p1	3.723	+	AK301862 NM_001242508	-48269	-	TSC_hg19_v1_chr18_-_21852189 AF274714 NM_018030	-87546	-	TSC_hg19_v1_chr18_-_21851919 AK001079	-87827	-	TSC_hg19_v1_chr18_-_21977762 BC136452 BC144117 BC041563 AK292895	37999	-	TSC_hg19_v1_chr18_-_21977789 AF323726 AF392450 AK096358 NM_080597	38093	-	TSC_hg19_v1_chr18_+_22006608 AK292533 NM_018439 BC036074	66869	+	AK301862|OSBPL1A|114876|oxysterol binding protein-like 1A##NM_001242508|OSBPL1A|114876|oxysterol binding protein-like 1A##AF274714|OSBPL1A|114876|oxysterol binding protein-like 1A##NM_018030|OSBPL1A|114876|oxysterol binding protein-like 1A##AK001079|OSBPL1A|114876|oxysterol binding protein-like 1A##BC136452|OSBPL1A|114876|oxysterol binding protein-like 1A##BC144117|OSBPL1A|114876|oxysterol binding protein-like 1A##BC041563|OSBPL1A|114876|oxysterol binding protein-like 1A##AK292895|OSBPL1A|114876|oxysterol binding protein-like 1A##AF323726|OSBPL1A|114876|oxysterol binding protein-like 1A##AF392450|OSBPL1A|114876|oxysterol binding protein-like 1A##AK096358|OSBPL1A|114876|oxysterol binding protein-like 1A##NM_080597|OSBPL1A|114876|oxysterol binding protein-like 1A##AK292533|IMPACT|55364|Impact homolog (mouse)##NM_018439|IMPACT|55364|Impact homolog (mouse)##BC036074|IMPACT|55364|Impact homolog (mouse)	0.0	
chr18	40976358	40976491	reg1033582.p1	3.723	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-118995	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-280855	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-1441191	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	1283690	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	1284444	+	NM_001242692 AK292422	1816528	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.713442	CTCF.p2:13:0.713
chr19	2187987	2188124	reg1040094.p1	3.723	+	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	-23917	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-36502	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	-36513	-	BC021037 TSC_hg19_v1_chr19_+_2222534	34419	+	BC032803 TSC_hg19_v1_chr19_+_2232168	44066	+	CR457253 CU679203 TSC_hg19_v1_chr19_-_2236329 AK092742 AX747701 BC003084 BC008966 AK001159 NM_018049	48234	-	AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##CR457253|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK092742|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC003084|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##BC008966|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##AK001159|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1##NM_018049|PLEKHJ1|55111|pleckstrin homology domain containing, family J member 1	0.0	
chr19	6632001	6632085	reg1005227.p1	3.723	+	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	-40885	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	-40937	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	-41011	-	TSC_hg19_v1_chr19_-_6670094 CR541854 CR541871 AB528780 AF036581 AY028261 AY358812 BC018058 AK292037	38081	-	AF064090 NM_003807 NM_172014	38555	-	TSC_hg19_v1_chr19_-_6720662 BC063852 BC150179 BC150200 K02765 AK304071 BC150299 NM_000064 AK299114	88613	-	S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##BT007211|CD70|970|CD70 molecule##CR541854|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541871|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF036581|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY028261|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY358812|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC018058|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AK292037|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF064090|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_003807|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_172014|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC063852|C3|718|complement component 3##BC150179|C3|718|complement component 3##BC150200|C3|718|complement component 3##K02765|C3|718|complement component 3##AK304071|C3|718|complement component 3##BC150299|C3|718|complement component 3##NM_000064|C3|718|complement component 3	0.0	
chr20	25291423	25291531	reg1008173.p2	3.723	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	-62719	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	-114997	+	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	-115107	+	CU680756 AK075023 AK290815 AK293495 TSC_hg19_v1_chr20_-_25371426	79908	-	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	80049	-	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	96845	+	NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK075023|ABHD12|26090|abhydrolase domain containing 12##AK290815|ABHD12|26090|abhydrolase domain containing 12##AK293495|ABHD12|26090|abhydrolase domain containing 12##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	0.0	
chr22	45094084	45094227	reg1000329.p2	3.723	+	AK091884 TSC_hg19_v1_chr22_+_45072964 AK055848	-21185	+	NM_001017530 NM_001198721 NM_015366	-21468	+	TSC_hg19_v1_chr22_+_45064630 AY859540 NM_001017528 NM_001017529	-29660	+	TSC_hg19_v1_chr22_+_45098090 NM_181333	3913	+	AK291564 TSC_hg19_v1_chr22_+_45098246 AF177331 AL355192 NM_181334	4098	+	AK001306 NM_001017526 NM_001198726 NM_181335 BC059382 BC067824 BC048280	54306	+	AK091884|PRR5|55615|proline rich 5 (renal)##AK055848|PRR5|55615|proline rich 5 (renal)##NM_001017530|PRR5|55615|proline rich 5 (renal)##NM_001198721|PRR5|55615|proline rich 5 (renal)##NM_015366|PRR5|55615|proline rich 5 (renal)##AY859540|PRR5|55615|proline rich 5 (renal)##NM_001017528|PRR5|55615|proline rich 5 (renal)##NM_001017529|PRR5|55615|proline rich 5 (renal)##NM_181333|PRR5|55615|proline rich 5 (renal)##AK291564|PRR5|55615|proline rich 5 (renal)##AF177331|PRR5|55615|proline rich 5 (renal)##AL355192|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181334|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##AK001306|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001017526|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001198726|ARHGAP8|23779|Rho GTPase activating protein 8##NM_181335|ARHGAP8|23779|Rho GTPase activating protein 8##BC059382|ARHGAP8|23779|Rho GTPase activating protein 8##BC067824|ARHGAP8|23779|Rho GTPase activating protein 8##BC048280|ARHGAP8|23779|Rho GTPase activating protein 8	0.0	
chr3	138660259	138660358	reg1034727.p1	3.723	+	AB384841 BC114432 NM_006219 S67334	-182124	-	AK001444 NM_018147	-332390	+	NM_001033030 NM_001033031 NM_001033032 TSC_hg19_v1_chr3_+_138327638 BC012478	-332692	+	BC062549 NM_023067	5673	-	AK125319 NM_001040061	5767	+	NM_001134659	64801	-	BC114432|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##NM_006219|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##S67334|PIK3CB|5291|phosphoinositide-3-kinase, catalytic, beta polypeptide##AK001444|FAIM|55179|Fas apoptotic inhibitory molecule##NM_018147|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033030|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033031|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033032|FAIM|55179|Fas apoptotic inhibitory molecule##BC012478|FAIM|55179|Fas apoptotic inhibitory molecule##BC062549|FOXL2|668|forkhead box L2##NM_023067|FOXL2|668|forkhead box L2##AK125319|C3orf72|401089|chromosome 3 open reading frame 72##NM_001040061|C3orf72|401089|chromosome 3 open reading frame 72##NM_001134659|PRR23A|729627|proline rich 23A	0.250489	CTCF.p2:5:0.250
chr4	38162567	38162728	reg1038459.p2	3.723	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-183630	+	AF095288 BC069114 BC069400 NM_006607	-200592	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-269858	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	503179	+	AF289565 TSC_hg19_v1_chr4_-_38666549	503842	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	621952	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr5	139028148	139028215	reg1033495.p2	3.723	+	TSC_hg19_v1_chr5_+_139028290 AB097005 AB097032 NM_016463	-14	+	BC024040 BC041013 TSC_hg19_v1_chr5_+_139027968 BC050046 BC017439	-197	+	TSC_hg19_v1_chr5_+_139027942 BC006428	-251	+	TSC_hg19_v1_chr5_+_139028524 AK001782	327	+	BC002490 TSC_hg19_v1_chr5_+_139060088 AB463548 GQ379202 AK314420	31903	+	AF151029 TSC_hg19_v1_chr5_+_139060229	32031	+	AB097005|CXXC5|51523|CXXC finger protein 5##AB097032|CXXC5|51523|CXXC finger protein 5##NM_016463|CXXC5|51523|CXXC finger protein 5##BC024040|CXXC5|51523|CXXC finger protein 5##BC041013|CXXC5|51523|CXXC finger protein 5##BC050046|CXXC5|51523|CXXC finger protein 5##BC017439|CXXC5|51523|CXXC finger protein 5##BC006428|CXXC5|51523|CXXC finger protein 5##AK001782|CXXC5|51523|CXXC finger protein 5##BC002490|CXXC5|51523|CXXC finger protein 5##GQ379202|CXXC5|51523|CXXC finger protein 5##AK314420|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5	0.0	
chr8	61705475	61705591	reg1037185.p2	3.723	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-114131	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-114245	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-275783	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	495017	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	896813	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	921485	-	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase	0.0	
chrX	70332228	70332408	reg1024706.p3	3.723	+	AB102794 AB102797 AB102793 AB102795 CU677147 DQ895451 EU176337 TSC_hg19_v1_chrX_-_70331422 AB463801 BC014972 BC071710 D11086 AK314932 AK298656 NM_000206	-930	-	NM_001025265	-5681	-	TSC_hg19_v1_chrX_+_70316026 NM_001170931 NM_005938 AK300142 X93996 BC106761 AB463650 AF384029	-16311	+	TSC_hg19_v1_chrX_+_70338445 AK302543 NM_005120 AF071309	6186	+	NM_001166660 NM_018977 NM_181303 BX641059 TSC_hg19_v1_chrX_+_70364698 BC028738 AK299669	32371	+	TSC_hg19_v1_chrX_+_70364710 AF217411 AX773948 AX773949	32395	+	AB102794|IL2RG|3561|interleukin 2 receptor, gamma##AB102797|IL2RG|3561|interleukin 2 receptor, gamma##AB102793|IL2RG|3561|interleukin 2 receptor, gamma##AB102795|IL2RG|3561|interleukin 2 receptor, gamma##DQ895451|IL2RG|3561|interleukin 2 receptor, gamma##EU176337|IL2RG|3561|interleukin 2 receptor, gamma##BC014972|IL2RG|3561|interleukin 2 receptor, gamma##BC071710|IL2RG|3561|interleukin 2 receptor, gamma##D11086|IL2RG|3561|interleukin 2 receptor, gamma##AK314932|IL2RG|3561|interleukin 2 receptor, gamma##AK298656|IL2RG|3561|interleukin 2 receptor, gamma##NM_000206|IL2RG|3561|interleukin 2 receptor, gamma##NM_001025265|CXorf65|158830|chromosome X open reading frame 65##NM_001170931|FOXO4|4303|forkhead box O4##NM_005938|FOXO4|4303|forkhead box O4##X93996|FOXO4|4303|forkhead box O4##BC106761|FOXO4|4303|forkhead box O4##AF384029|FOXO4|4303|forkhead box O4##AK302543|MED12|9968|mediator complex subunit 12##NM_005120|MED12|9968|mediator complex subunit 12##AF071309|MED12|9968|mediator complex subunit 12##NM_001166660|NLGN3|54413|neuroligin 3##NM_018977|NLGN3|54413|neuroligin 3##NM_181303|NLGN3|54413|neuroligin 3##BX641059|NLGN3|54413|neuroligin 3##BC028738|NLGN3|54413|neuroligin 3##AK299669|NLGN3|54413|neuroligin 3##AF217411|NLGN3|54413|neuroligin 3	0.0	
chr1	247573553	247573663	reg1033034.p2	3.722	+	TSC_hg19_v1_chr1_-_247494994 BC007263 NM_032752	-78591	-	BC126341 BC126367 NM_173858	-154285	+	BC032514 BC096349 BC096350 BC096351 BC099661 BC013605 AK054647 NM_001243740 NM_003431	-238324	-	AK314998 NM_001079821 NM_001127461 TSC_hg19_v1_chr1_+_247579474 AB208891	5861	+	AF410477 AF427617 NM_001127462 NM_001243133 NM_004895 NM_183395	7742	+	NM_001004492 BC137181 BC137205	41687	-	BC007263|ZNF496|84838|zinc finger protein 496##NM_032752|ZNF496|84838|zinc finger protein 496##BC126341|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC126367|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##NM_173858|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC032514|ZNF124|7678|zinc finger protein 124##BC096349|ZNF124|7678|zinc finger protein 124##BC096350|ZNF124|7678|zinc finger protein 124##BC096351|ZNF124|7678|zinc finger protein 124##BC099661|ZNF124|7678|zinc finger protein 124##BC013605|ZNF124|7678|zinc finger protein 124##AK054647|ZNF124|7678|zinc finger protein 124##NM_001243740|ZNF124|7678|zinc finger protein 124##NM_003431|ZNF124|7678|zinc finger protein 124##AK314998|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001079821|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127461|NLRP3|114548|NLR family, pyrin domain containing 3##AB208891|NLRP3|114548|NLR family, pyrin domain containing 3##AF410477|NLRP3|114548|NLR family, pyrin domain containing 3##AF427617|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127462|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001243133|NLRP3|114548|NLR family, pyrin domain containing 3##NM_004895|NLRP3|114548|NLR family, pyrin domain containing 3##NM_183395|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001004492|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##BC137181|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##BC137205|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11	0.0	
chr14	103072790	103072877	reg1035369.p2	3.722	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-13672	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	-13835	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-96719	-	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	170986	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	171067	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	316165	+	AF155595|RCOR1|23186|REST corepressor 1##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)	0.0	
chr19	36419503	36419680	reg1028917.p1	3.722	+	TSC_hg19_v1_chr19_-_36399212 NM_001173514 NM_001173515 NM_003332 NM_198125	-20378	-	TSC_hg19_v1_chr19_-_36399198 AF019562 BC011175 AK290385	-20399	-	TSC_hg19_v1_chr19_-_36399181 BT009851 CR450342 CR542202 AB590208 AY074782 CU679890 DQ891092 DQ894274 AJ010098	-20441	-	BC003578 NM_024509	8430	+	TSC_hg19_v1_chr19_+_36486091 NM_001042631 BC007205 BC064605 BC069054 BC137516 BC137517	66503	+	CU690916 AK093764 AX748293 NM_001039876 BC052573 BC038360	80047	-	NM_001173514|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_001173515|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_003332|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_198125|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AF019562|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BC011175|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AK290385|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BT009851|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR450342|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR542202|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AY074782|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ891092|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ894274|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AJ010098|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BC003578|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_024509|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_001042631|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC007205|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC064605|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC069054|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137516|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137517|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##AK093764|C19orf46|163183|chromosome 19 open reading frame 46##NM_001039876|C19orf46|163183|chromosome 19 open reading frame 46##BC052573|C19orf46|163183|chromosome 19 open reading frame 46##BC038360|C19orf46|163183|chromosome 19 open reading frame 46	0.0	
chr4	160685660	160685793	reg1030301.p1	3.722	+	AK294459 NM_014247	-496729	+	AK058100 NM_152543	-729394	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-995441	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	2399425	-	TSC_hg19_v1_chr4_-_164088002 AK097352	3402266	-	TSC_hg19_v1_chr4_-_164088043 AK308601	3402311	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.939708	CTCF.p2:-47:0.940
chr4	98908331	98908429	reg1028277.p1	3.722	+	NM_005390 BC030697 BC094760 BC066953 BC119656 BC119657 BC127637 BC127638 AK313872	-2147122	+	BC034747 BC041156 TSC_hg19_v1_chr4_-_96470369 NM_003728	-2438004	-	TSC_hg19_v1_chr4_-_96470125 AK308421 AF055634 AK290500	-2438201	-	CU691442 BC036870 NM_174952	155965	-	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	274214	+	TSC_hg19_v1_chr4_-_99579781 BC009704 AF065389 AK315723 NM_005723	671379	-	NM_005390|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC030697|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC094760|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC066953|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119656|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC119657|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127637|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC127638|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##AK313872|PDHA2|5161|pyruvate dehydrogenase (lipoamide) alpha 2##BC034747|UNC5C|8633|unc-5 homolog C (C. elegans)##BC041156|UNC5C|8633|unc-5 homolog C (C. elegans)##NM_003728|UNC5C|8633|unc-5 homolog C (C. elegans)##AK308421|UNC5C|8633|unc-5 homolog C (C. elegans)##AF055634|UNC5C|8633|unc-5 homolog C (C. elegans)##AK290500|UNC5C|8633|unc-5 homolog C (C. elegans)##BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC009704|TSPAN5|10098|tetraspanin 5##AF065389|TSPAN5|10098|tetraspanin 5##AK315723|TSPAN5|10098|tetraspanin 5##NM_005723|TSPAN5|10098|tetraspanin 5	0.991432	CTCF.p2:2:0.991
chr6	225336	225402	reg1043119.p1	3.722	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	66716	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	67128	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	166395	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.0	
chr7	73030394	73030460	reg1032174.p1	3.722	+	TSC_hg19_v1_chr7_-_72993012 NM_012453	-37402	-	TSC_hg19_v1_chr7_-_72992936 BC047354 AL080162	-37465	-	BC006308 TSC_hg19_v1_chr7_-_72992919 AY358518 AK302277	-37503	-	TSC_hg19_v1_chr7_-_73038853 AF245470 AF245471 AF245472 AF245473 AF245474 AB527610 BC012925 AF156603 NM_032951 NM_032952 NM_032953 NM_032954	8443	-	TSC_hg19_v1_chr7_+_73082160 AY081952 BC029730 NM_001077621	51787	+	TSC_hg19_v1_chr7_+_73082320 BC064621	51896	+	NM_012453|TBL2|26608|transducin (beta)-like 2##BC047354|TBL2|26608|transducin (beta)-like 2##AL080162|TBL2|26608|transducin (beta)-like 2##BC006308|TBL2|26608|transducin (beta)-like 2##AY358518|TBL2|26608|transducin (beta)-like 2##AK302277|TBL2|26608|transducin (beta)-like 2##AF245470|MLXIPL|51085|MLX interacting protein-like##AF245471|MLXIPL|51085|MLX interacting protein-like##AF245472|MLXIPL|51085|MLX interacting protein-like##AF245473|MLXIPL|51085|MLX interacting protein-like##AF245474|MLXIPL|51085|MLX interacting protein-like##BC012925|MLXIPL|51085|MLX interacting protein-like##AF156603|MLXIPL|51085|MLX interacting protein-like##NM_032951|MLXIPL|51085|MLX interacting protein-like##NM_032952|MLXIPL|51085|MLX interacting protein-like##NM_032953|MLXIPL|51085|MLX interacting protein-like##NM_032954|MLXIPL|51085|MLX interacting protein-like##AY081952|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##BC029730|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##NM_001077621|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##BC064621|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)	0.621531	CTCF.p2:-3:0.622
chr1	110158552	110158652	reg1033366.p1	3.721	+	BC000233 NM_005272	-2914	-	TSC_hg19_v1_chr1_+_110091256 J03238 AK311691 AK312252 J03198 M27543 AB463705 DQ892862 DQ896111 CU692958 AF493907 BT019973 BT019974 J03005	-67307	+	TSC_hg19_v1_chr1_+_110091227 BC025285	-67377	+	TSC_hg19_v1_chr1_+_110162458 AK025706 NM_139156	3840	+	TSC_hg19_v1_chr1_+_110162467 BC007711 BC075844 AK314494 U16267	3939	+	NM_004037 U16268	4673	+	BC000233|GNAT2|2780|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2##NM_005272|GNAT2|2780|guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2##J03238|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##AK311691|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##AK312252|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##J03198|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##M27543|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##DQ892862|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##DQ896111|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##AF493907|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##BT019973|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##BT019974|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##J03005|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##BC025285|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3##AK025706|AMPD2|271|adenosine monophosphate deaminase 2##NM_139156|AMPD2|271|adenosine monophosphate deaminase 2##BC007711|AMPD2|271|adenosine monophosphate deaminase 2##BC075844|AMPD2|271|adenosine monophosphate deaminase 2##AK314494|AMPD2|271|adenosine monophosphate deaminase 2##U16267|AMPD2|271|adenosine monophosphate deaminase 2##NM_004037|AMPD2|271|adenosine monophosphate deaminase 2##U16268|AMPD2|271|adenosine monophosphate deaminase 2	0.0	
chr11	33313085	33313205	reg1034690.p1	3.721	+	TSC_hg19_v1_chr11_+_33279873 AK293009	-33276	+	NM_001048200 NM_005734 TSC_hg19_v1_chr11_+_33279272 Y09306 AF305239	-33860	+	AB527773 CU679493 BC059948 TSC_hg19_v1_chr11_-_33183016 U15782 BC108319 BC009792 AK297371 AK290836 NM_001033505 NM_001033506 NM_001326	-130169	-	TSC_hg19_v1_chr11_+_33350077 AY425958	36965	+	TSC_hg19_v1_chr11_+_33363104 AK304063	49999	+	TSC_hg19_v1_chr11_+_33563772 AK124395 NM_012194	250679	+	AK293009|HIPK3|10114|homeodomain interacting protein kinase 3##NM_001048200|HIPK3|10114|homeodomain interacting protein kinase 3##NM_005734|HIPK3|10114|homeodomain interacting protein kinase 3##Y09306|HIPK3|10114|homeodomain interacting protein kinase 3##AF305239|HIPK3|10114|homeodomain interacting protein kinase 3##BC059948|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##U15782|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##BC108319|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##BC009792|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##AK297371|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##AK290836|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##NM_001033505|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##NM_001033506|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##NM_001326|CSTF3|1479|cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa##AY425958|HIPK3|10114|homeodomain interacting protein kinase 3##AK304063|HIPK3|10114|homeodomain interacting protein kinase 3##AK124395|C11orf41|25758|chromosome 11 open reading frame 41##NM_012194|C11orf41|25758|chromosome 11 open reading frame 41	0.0	
chr11	33744705	33744886	reg1034906.p2	3.721	+	NM_001127227	-298	-	AK309894 NM_001127223 NM_001127225 NM_001127226	-523	-	NM_001166692	-22510	-	TSC_hg19_v1_chr11_-_33757970 M27909 AK311778 X16447 X17198 NM_000611 NM_203329 NM_203330 NM_203331	13153	-	AB209039 AF176702 TSC_hg19_v1_chr11_-_33796067 AF174595 CU692298 EU832324 EU832409 AL136625 BC046110 AK001943 AK128454 AK304866 BC039291 NM_012175 NM_033406	51197	-	AB463835 CU692080 DQ892333 DQ895538 BC073973 TSC_hg19_v1_chr11_-_33891132	146247	-	NM_001127227|CD59|966|CD59 molecule, complement regulatory protein##AK309894|CD59|966|CD59 molecule, complement regulatory protein##NM_001127223|CD59|966|CD59 molecule, complement regulatory protein##NM_001127225|CD59|966|CD59 molecule, complement regulatory protein##NM_001127226|CD59|966|CD59 molecule, complement regulatory protein##NM_001166692|C11orf91|100131378|chromosome 11 open reading frame 91##M27909|CD59|966|CD59 molecule, complement regulatory protein##AK311778|CD59|966|CD59 molecule, complement regulatory protein##X16447|CD59|966|CD59 molecule, complement regulatory protein##X17198|CD59|966|CD59 molecule, complement regulatory protein##NM_000611|CD59|966|CD59 molecule, complement regulatory protein##NM_203329|CD59|966|CD59 molecule, complement regulatory protein##NM_203330|CD59|966|CD59 molecule, complement regulatory protein##NM_203331|CD59|966|CD59 molecule, complement regulatory protein##AB209039|FBXO3|26273|F-box protein 3##AF176702|FBXO3|26273|F-box protein 3##AF174595|FBXO3|26273|F-box protein 3##EU832324|FBXO3|26273|F-box protein 3##EU832409|FBXO3|26273|F-box protein 3##AL136625|FBXO3|26273|F-box protein 3##BC046110|FBXO3|26273|F-box protein 3##AK001943|FBXO3|26273|F-box protein 3##AK128454|FBXO3|26273|F-box protein 3##AK304866|FBXO3|26273|F-box protein 3##BC039291|FBXO3|26273|F-box protein 3##NM_012175|FBXO3|26273|F-box protein 3##NM_033406|FBXO3|26273|F-box protein 3##DQ892333|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##DQ895538|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC073973|LMO2|4005|LIM domain only 2 (rhombotin-like 1)	0.0	
chr1	236320238	236320383	reg1031143.p2	3.721	+	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	-14434	+	TSC_hg19_v1_chr1_-_236228670 BC012501	-91570	-	TSC_hg19_v1_chr1_-_236228496 AK297234	-91812	-	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	124878	-	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	125006	-	AK290862 AY028913 NM_145861 BC106873 BC106874 BC114557 BC114560 BC128082	237373	+	BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##BC012501|NID1|4811|nidogen 1##AK297234|NID1|4811|nidogen 1##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK290862|EDARADD|128178|EDAR-associated death domain##AY028913|EDARADD|128178|EDAR-associated death domain##NM_145861|EDARADD|128178|EDAR-associated death domain##BC114557|EDARADD|128178|EDAR-associated death domain##BC114560|EDARADD|128178|EDAR-associated death domain##BC128082|EDARADD|128178|EDAR-associated death domain	0.02335	
chr1	245679630	245679732	reg1032601.p2	3.721	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-361373	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-545998	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-546051	+	AK024733 NM_022743	901030	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	990873	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	990927	-	AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3	0.977918	CTCF.p2:-5:0.978
chr1	246175930	246176069	reg1005413.p2	3.721	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-857691	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-1042316	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-1042369	+	AK024733 NM_022743	404712	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	494555	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	494609	-	AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3	0.0	
chr12	56753692	56753872	reg1036616.p1	3.721	+	AY359083 NM_016584 AB030000 AF301620 BC066267 BC066268 BC066269 BC067511 BC067512 BC067513 AB527703 CU688124 CU688312	-21039	+	AK310822 AB014610 BC024043 NM_001166279 NM_014871	-26004	-	BX648106 BC094885 NM_001127460	-26293	-	BC051284 M97934 TSC_hg19_v1_chr12_-_56753892 AK310727 AK296939 AK296940	101	-	TSC_hg19_v1_chr12_-_56753912 AK308051	131	-	TSC_hg19_v1_chr12_-_56753946 AK316516 AK295052 AK295114 NM_005419 NM_198332	194	-	AY359083|IL23A|51561|interleukin 23, alpha subunit p19##NM_016584|IL23A|51561|interleukin 23, alpha subunit p19##AB030000|IL23A|51561|interleukin 23, alpha subunit p19##AF301620|IL23A|51561|interleukin 23, alpha subunit p19##BC066267|IL23A|51561|interleukin 23, alpha subunit p19##BC066268|IL23A|51561|interleukin 23, alpha subunit p19##BC066269|IL23A|51561|interleukin 23, alpha subunit p19##BC067511|IL23A|51561|interleukin 23, alpha subunit p19##BC067512|IL23A|51561|interleukin 23, alpha subunit p19##BC067513|IL23A|51561|interleukin 23, alpha subunit p19##AK310822|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##AB014610|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC024043|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_001166279|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_014871|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BX648106|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC094885|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_001127460|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC051284|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##M97934|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK310727|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK296939|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK296940|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK308051|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK316516|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK295052|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##AK295114|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##NM_005419|STAT2|6773|signal transducer and activator of transcription 2, 113kDa##NM_198332|STAT2|6773|signal transducer and activator of transcription 2, 113kDa	0.020208	
chr16	88847293	88847368	reg1043283.p1	3.721	+	TSC_hg19_v1_chr16_+_88772910 BC121805 BC125269 NM_001012759 NM_001012762 BC157881 AK299521 BC108659 BC021056 BC063512 BC080540	-74407	+	TSC_hg19_v1_chr16_-_88772809 NM_178841	-74508	-	CU680704 HQ258016 TSC_hg19_v1_chr16_-_88772797 BC013948 AK290920 BC017226 NM_001171815	-74562	-	NM_001142864 AB384448 TSC_hg19_v1_chr16_-_88851456	4088	-	AB053172 NM_030928 TSC_hg19_v1_chr16_+_88870207	22867	+	TSC_hg19_v1_chr16_+_88870215 AF321125 BC000137 BC009410 BC008860 BC008676	22950	+	BC121805|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC125269|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_001012759|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_001012762|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC157881|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##AK299521|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC108659|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC021056|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC063512|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##BC080540|CTU2|348180|cytosolic thiouridylase subunit 2 homolog (S. pombe)##NM_178841|RNF166|115992|ring finger protein 166##HQ258016|RNF166|115992|ring finger protein 166##BC013948|RNF166|115992|ring finger protein 166##AK290920|RNF166|115992|ring finger protein 166##BC017226|RNF166|115992|ring finger protein 166##NM_001171815|RNF166|115992|ring finger protein 166##NM_001142864|PIEZO1|9780|piezo-type mechanosensitive ion channel component 1##AB384448|PIEZO1|9780|piezo-type mechanosensitive ion channel component 1##AB053172|CDT1|81620|chromatin licensing and DNA replication factor 1##NM_030928|CDT1|81620|chromatin licensing and DNA replication factor 1##AF321125|CDT1|81620|chromatin licensing and DNA replication factor 1##BC000137|CDT1|81620|chromatin licensing and DNA replication factor 1##BC009410|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008860|CDT1|81620|chromatin licensing and DNA replication factor 1##BC008676|CDT1|81620|chromatin licensing and DNA replication factor 1	0.0	
chr19	37701318	37701498	reg1032212.p1	3.721	+	AF086428 BC063820 TSC_hg19_v1_chr19_-_37663623 AK056389 NM_152655 AK290660 BC026081	-37811	-	NM_199126 BC052956	-38074	-	TSC_hg19_v1_chr19_+_37569355 AK315728 AK056753 BC026210 NM_144689	-132064	+	BC051277 BC067088 BC080550 TSC_hg19_v1_chr19_-_37701446 AY147015 NM_152279	9	-	TSC_hg19_v1_chr19_+_37709098 AK122892	7740	+	AK093182 AX747975 AY438646 NM_152604	15957	+	AF086428|ZNF585A|199704|zinc finger protein 585A##BC063820|ZNF585A|199704|zinc finger protein 585A##AK056389|ZNF585A|199704|zinc finger protein 585A##NM_152655|ZNF585A|199704|zinc finger protein 585A##AK290660|ZNF585A|199704|zinc finger protein 585A##BC026081|ZNF585A|199704|zinc finger protein 585A##NM_199126|ZNF585A|199704|zinc finger protein 585A##BC052956|ZNF585A|199704|zinc finger protein 585A##AK315728|ZNF420|147923|zinc finger protein 420##AK056753|ZNF420|147923|zinc finger protein 420##BC026210|ZNF420|147923|zinc finger protein 420##NM_144689|ZNF420|147923|zinc finger protein 420##BC051277|ZNF585B|92285|zinc finger protein 585B##BC067088|ZNF585B|92285|zinc finger protein 585B##BC080550|ZNF585B|92285|zinc finger protein 585B##AY147015|ZNF585B|92285|zinc finger protein 585B##NM_152279|ZNF585B|92285|zinc finger protein 585B##AK122892|ZNF383|163087|zinc finger protein 383##AK093182|ZNF383|163087|zinc finger protein 383##AY438646|ZNF383|163087|zinc finger protein 383##NM_152604|ZNF383|163087|zinc finger protein 383	0.0	
chr19	7105075	7105141	reg1031466.p2	3.721	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-5557	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-35393	+	AK315405 NM_001044387 NM_001044388 NM_024341	-35646	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	188852	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	354899	+	TSC_hg19_v1_chr19_+_7460061 AB011093	354969	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr20	62854906	62854999	reg1034928.p1	3.721	+	AB020642 NM_004535 TSC_hg19_v1_chr20_+_62795840	-59119	+	TSC_hg19_v1_chr20_+_62795804 BC018917	-59162	+	BC067481 BC067482 BC067483 CU688304 CU688306 NM_005286	-116769	-	TSC_hg19_v1_chr20_+_62887100 NM_001104925 NM_018257 BC040945 BC032332 AK001745 BC045775	32209	+	None	None	None	None	None	None	AB020642|MYT1|4661|myelin transcription factor 1##NM_004535|MYT1|4661|myelin transcription factor 1##BC018917|MYT1|4661|myelin transcription factor 1##BC067481|NPBWR2|2832|neuropeptides B/W receptor 2##BC067482|NPBWR2|2832|neuropeptides B/W receptor 2##BC067483|NPBWR2|2832|neuropeptides B/W receptor 2##NM_005286|NPBWR2|2832|neuropeptides B/W receptor 2##NM_001104925|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##NM_018257|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC040945|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC032332|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##AK001745|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC045775|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	0.0	
chr2	110914881	110914970	reg1034074.p1	3.721	+	AK125647 NM_005434	-40783	-	TSC_hg19_v1_chr2_-_110873641 AK056616	-41281	-	TSC_hg19_v1_chr2_-_110873536 AK311353	-41360	-	AF023674 CU679489 BC062574 TSC_hg19_v1_chr2_-_110962561 BC009789 AK299011 AK225600 AK307654	47630	-	AJ001815 BC032939 TSC_hg19_v1_chr2_-_110962582 BX571745 NM_000272 NM_001128178 NM_001128179 NM_207181	47682	-	TSC_hg19_v1_chr2_-_110970123 BC031315	55196	-	AK125647|MALL|7851|mal, T-cell differentiation protein-like##NM_005434|MALL|7851|mal, T-cell differentiation protein-like##AK056616|MALL|7851|mal, T-cell differentiation protein-like##AK311353|MALL|7851|mal, T-cell differentiation protein-like##AF023674|NPHP1|4867|nephronophthisis 1 (juvenile)##BC062574|NPHP1|4867|nephronophthisis 1 (juvenile)##BC009789|NPHP1|4867|nephronophthisis 1 (juvenile)##AK299011|NPHP1|4867|nephronophthisis 1 (juvenile)##AK225600|NPHP1|4867|nephronophthisis 1 (juvenile)##AK307654|NPHP1|4867|nephronophthisis 1 (juvenile)##AJ001815|NPHP1|4867|nephronophthisis 1 (juvenile)##BC032939|NPHP1|4867|nephronophthisis 1 (juvenile)##BX571745|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_000272|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128178|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_001128179|NPHP1|4867|nephronophthisis 1 (juvenile)##NM_207181|NPHP1|4867|nephronophthisis 1 (juvenile)##BC031315|LINC00116|205251|long intergenic non-protein coding RNA 116	0.0	
chr2	200805329	200805464	reg1037477.p2	3.721	+	TSC_hg19_v1_chr2_+_200776033 BC036456 AK303210	-29360	+	TSC_hg19_v1_chr2_+_200776015 AK096292	-29382	+	TSC_hg19_v1_chr2_+_200775981 NM_153689	-29419	+	TSC_hg19_v1_chr2_+_200820311 AK026208 NM_024520	14760	+	TSC_hg19_v1_chr2_-_200820204 HQ258367 AK298977 BC025758 AK095272 BC132835 BC136837 BC144420 BX648265 AK293064	14816	-	BX647677 NM_001039693	15062	-	BC036456|C2orf69|205327|chromosome 2 open reading frame 69##AK096292|C2orf69|205327|chromosome 2 open reading frame 69##NM_153689|C2orf69|205327|chromosome 2 open reading frame 69##AK026208|C2orf47|79568|chromosome 2 open reading frame 47##NM_024520|C2orf47|79568|chromosome 2 open reading frame 47##HQ258367|TYW5|129450|tRNA-yW synthesizing protein 5##AK298977|TYW5|129450|tRNA-yW synthesizing protein 5##BC025758|TYW5|129450|tRNA-yW synthesizing protein 5##AK095272|TYW5|129450|tRNA-yW synthesizing protein 5##BC132835|TYW5|129450|tRNA-yW synthesizing protein 5##BC136837|TYW5|129450|tRNA-yW synthesizing protein 5##BC144420|TYW5|129450|tRNA-yW synthesizing protein 5##BX648265|TYW5|129450|tRNA-yW synthesizing protein 5##AK293064|TYW5|129450|tRNA-yW synthesizing protein 5##BX647677|TYW5|129450|tRNA-yW synthesizing protein 5##NM_001039693|TYW5|129450|tRNA-yW synthesizing protein 5	0.734893	CTCF.p2:-8:0.735
chr3	13494227	13494365	reg1012131.p1	3.721	+	TSC_hg19_v1_chr3_-_13461832 BC020573 NM_024923	-32479	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	-32564	-	AB020713 TSC_hg19_v1_chr3_-_13384784	-109531	-	NM_024827 TSC_hg19_v1_chr3_+_13521806 AK299021 AK025426 AK025890 BC009676 NM_001136041 AK293223	27516	+	AK129883 NM_001004019 NM_001998 TSC_hg19_v1_chr3_+_13590624	96329	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	96367	+	BC020573|NUP210|23225|nucleoporin 210kDa##NM_024923|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa##AB020713|NUP210|23225|nucleoporin 210kDa##NM_024827|HDAC11|79885|histone deacetylase 11##AK299021|HDAC11|79885|histone deacetylase 11##AK025426|HDAC11|79885|histone deacetylase 11##AK025890|HDAC11|79885|histone deacetylase 11##BC009676|HDAC11|79885|histone deacetylase 11##NM_001136041|HDAC11|79885|histone deacetylase 11##AK293223|HDAC11|79885|histone deacetylase 11##AK129883|FBLN2|2199|fibulin 2##NM_001004019|FBLN2|2199|fibulin 2##NM_001998|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2	0.0	
chr4	185305349	185305528	reg1035795.p1	3.721	+	BC035035 AY358676 AK057370 NM_153343	-166373	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-477527	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-477618	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	90243	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	265163	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	265395	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.052081	
chr4	2956946	2957126	reg1027429.p2	3.721	+	TSC_hg19_v1_chr4_+_2936642 AK054619 BC020978 BC032331 BC041605	-20382	+	TSC_hg19_v1_chr4_-_2936577 NM_001146069	-20461	-	TSC_hg19_v1_chr4_-_2936515 BC001502 BC014979	-20549	-	TSC_hg19_v1_chr4_-_2965083 CU693114 BC026035	8027	-	TSC_hg19_v1_chr4_-_2965091 AF040965	8062	-	BC053635 TSC_hg19_v1_chr4_-_2965134 BC017358 NM_003703	8087	-	BC020978|C4orf10|317648|chromosome 4 open reading frame 10##BC041605|C4orf10|317648|chromosome 4 open reading frame 10##NM_001146069|MFSD10|10227|major facilitator superfamily domain containing 10##BC001502|MFSD10|10227|major facilitator superfamily domain containing 10##BC014979|MFSD10|10227|major facilitator superfamily domain containing 10##BC026035|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##AF040965|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC053635|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##BC017358|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##NM_003703|NOP14|8602|NOP14 nucleolar protein homolog (yeast)	0.030727	
chr1	164643014	164643195	reg1038067.p1	3.720	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	-114118	+	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	-114513	+	NM_031423 NM_145697 TSC_hg19_v1_chr1_+_163291746 AK093348 AX748068 AF326731 BC008489 AB050577	-1351328	+	TSC_hg19_v1_chr1_+_164818083 AK022520	175019	+	AK122800 NM_001174069	682371	-	AK127724 NM_177398	682847	-	AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_031423|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_145697|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK093348|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AF326731|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC008489|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AB050577|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha	0.997323	CTCF.p2:-45:0.997
chr1	186818672	186818772	reg1035382.p2	3.720	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-20634	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-169232	-	M33478 NM_002597	-388495	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	3628013	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	5308881	+	AY643711 NM_001039152	5467399	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.0	
chr1	205257541	205257721	reg1030713.p2	3.720	+	AY358192 TSC_hg19_v1_chr1_+_205236667	-20997	+	AK293734 NM_001242925	-59573	+	TSC_hg19_v1_chr1_+_205197073 AB007950 NM_014858 AK131419	-60548	+	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	33212	-	BC036076 TSC_hg19_v1_chr1_-_205313311	55679	-	AK299227 AK001610 NM_018203 AK096590	68409	-	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK293734|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_001242925|TMCC2|9911|transmembrane and coiled-coil domain family 2##AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2##AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC036076|KLHDC8A|55220|kelch domain containing 8A##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A	0.0	
chr12	76371847	76372028	reg1033672.p2	3.720	+	BC005225 TSC_hg19_v1_chr12_-_75905414 NM_007043	-466518	-	BC033887 TSC_hg19_v1_chr12_-_75905393 BC014034 BC026107	-466542	-	AK022133 TSC_hg19_v1_chr12_-_75905382 BC016778 U55766	-466552	-	AF220656 TSC_hg19_v1_chr12_-_76424608	52610	-	TSC_hg19_v1_chr12_-_76425369 BC126425 BC130427 BC110820 U92983 BC018929	53353	-	TSC_hg19_v1_chr12_-_76425376 AK304224 AB587598 NM_007350 Z50194	53590	-	BC005225|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##NM_007043|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC033887|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC014034|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC026107|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK022133|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC016778|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##U55766|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AF220656|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC126425|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC130427|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC110820|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##U92983|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC018929|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##AK304224|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##NM_007350|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##Z50194|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1	0.0	
chr14	76618935	76619047	reg1025940.p2	3.720	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-685	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-714	+	TSC_hg19_v1_chr14_+_76618258 NM_017926 NM_017972 BC058032	-735	+	NM_004452	218698	+	TSC_hg19_v1_chr14_+_77227817 AK094330	608809	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	609464	+	AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_017926|C14orf118|55668|chromosome 14 open reading frame 118##NM_017972|C14orf118|55668|chromosome 14 open reading frame 118##BC058032|C14orf118|55668|chromosome 14 open reading frame 118##NM_004452|ESRRB|2103|estrogen-related receptor beta##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1	0.0	
chr16	52102470	52102598	reg1038698.p1	3.720	+	BC113881 BC113906 BC131548 Y18265 TSC_hg19_v1_chr16_-_51185251 AK295103 NM_002968	-917122	-	AK307835 NM_001127892	-918027	-	TSC_hg19_v1_chr16_+_50776066 AF161542 NM_001042412 BC012342	-1326476	+	NM_001242473	5312	-	NM_001080430	478271	-	AK299202 NM_001146188	479179	-	BC113881|SALL1|6299|sal-like 1 (Drosophila)##BC113906|SALL1|6299|sal-like 1 (Drosophila)##BC131548|SALL1|6299|sal-like 1 (Drosophila)##Y18265|SALL1|6299|sal-like 1 (Drosophila)##AK295103|SALL1|6299|sal-like 1 (Drosophila)##NM_002968|SALL1|6299|sal-like 1 (Drosophila)##AK307835|SALL1|6299|sal-like 1 (Drosophila)##NM_001127892|SALL1|6299|sal-like 1 (Drosophila)##AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)##BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001242473|LOC388276|388276|hCG2045437##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3	0.068848	
chr17	18060809	18060937	reg1035774.p2	3.720	+	AF144094 NM_016239	-48854	+	TSC_hg19_v1_chr17_+_17991289 AK313362 BC062572 BC000493 NM_001388 AK297569 X80754 AK295575 DQ890768 DQ893929 BT006976	-69605	+	TSC_hg19_v1_chr17_+_17942750 BC041829 NM_024052 AK315083 AK074284 AK127580 BC000636	-118066	+	TSC_hg19_v1_chr17_+_18086815 NM_017758	25966	+	TSC_hg19_v1_chr17_+_18087141 AK301107 BC062339	26316	+	TSC_hg19_v1_chr17_+_18128931 BC028037 NM_004140 BC151838 BC028214 X86371	68065	+	AF144094|MYO15A|51168|myosin XVA##NM_016239|MYO15A|51168|myosin XVA##AK313362|DRG2|1819|developmentally regulated GTP binding protein 2##BC062572|DRG2|1819|developmentally regulated GTP binding protein 2##BC000493|DRG2|1819|developmentally regulated GTP binding protein 2##NM_001388|DRG2|1819|developmentally regulated GTP binding protein 2##AK297569|DRG2|1819|developmentally regulated GTP binding protein 2##X80754|DRG2|1819|developmentally regulated GTP binding protein 2##AK295575|DRG2|1819|developmentally regulated GTP binding protein 2##DQ890768|DRG2|1819|developmentally regulated GTP binding protein 2##DQ893929|DRG2|1819|developmentally regulated GTP binding protein 2##BT006976|DRG2|1819|developmentally regulated GTP binding protein 2##BC041829|C17orf39|79018|chromosome 17 open reading frame 39##NM_024052|C17orf39|79018|chromosome 17 open reading frame 39##AK315083|C17orf39|79018|chromosome 17 open reading frame 39##AK074284|C17orf39|79018|chromosome 17 open reading frame 39##AK127580|C17orf39|79018|chromosome 17 open reading frame 39##BC000636|C17orf39|79018|chromosome 17 open reading frame 39##NM_017758|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##AK301107|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##BC062339|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##BC028037|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##NM_004140|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##BC151838|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##BC028214|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##X86371|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	0.0	
chr18	13569340	13569449	reg1024247.p2	3.720	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-350609	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-578049	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-621330	+	NM_001003674 NM_001003675	42270	+	AF009426 AF009427 NM_004338 NM_181483	51472	+	TSC_hg19_v1_chr18_-_13726549 AK055618	157112	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.0	
chr18	9082811	9082895	reg1038580.p1	3.720	+	AB384528 TSC_hg19_v1_chr18_+_8718600	-364329	+	AK131528 NM_015210	-365485	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	-473107	+	TSC_hg19_v1_chr18_+_9102620 NM_021074	19769	+	TSC_hg19_v1_chr18_+_9102715 AK312129 BC001632 BC017487 M22538 AK291865 AB590136 BC071689 DQ892593 DQ895813 CR456928	19867	+	TSC_hg19_v1_chr18_+_9136811 NM_001083625 NM_015208 BC070234 AK024808 AY373757 BC057225 AL834204	53938	+	AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165##NM_021074|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK312129|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC001632|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC017487|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##M22538|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##AK291865|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##BC071689|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ892593|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##DQ895813|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##CR456928|NDUFV2|4729|NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa##NM_001083625|ANKRD12|23253|ankyrin repeat domain 12##NM_015208|ANKRD12|23253|ankyrin repeat domain 12##BC070234|ANKRD12|23253|ankyrin repeat domain 12##AK024808|ANKRD12|23253|ankyrin repeat domain 12##AY373757|ANKRD12|23253|ankyrin repeat domain 12##BC057225|ANKRD12|23253|ankyrin repeat domain 12##AL834204|ANKRD12|23253|ankyrin repeat domain 12	0.0	
chr19	37019852	37019919	reg1039891.p2	3.720	+	BC042676 AK291442 NM_001012756 NM_001166036 NM_001166037 NM_001166038	-677	-	TSC_hg19_v1_chr19_-_36980764 BX649070	-39100	-	TSC_hg19_v1_chr19_+_36980528 AK298140	-39348	+	TSC_hg19_v1_chr19_-_37064192 BC064690 AK025110	44262	-	TSC_hg19_v1_chr19_-_37064195 NM_020951	44319	-	TSC_hg19_v1_chr19_-_37096160 AK094618 NM_001145649 NM_001145650	76283	-	BC042676|ZNF260|339324|zinc finger protein 260##AK291442|ZNF260|339324|zinc finger protein 260##NM_001012756|ZNF260|339324|zinc finger protein 260##NM_001166036|ZNF260|339324|zinc finger protein 260##NM_001166037|ZNF260|339324|zinc finger protein 260##NM_001166038|ZNF260|339324|zinc finger protein 260##BX649070|ZNF566|84924|zinc finger protein 566##AK298140|LOC728752|728752|uncharacterized LOC728752##BC064690|ZNF529|57711|zinc finger protein 529##AK025110|ZNF529|57711|zinc finger protein 529##NM_020951|ZNF529|57711|zinc finger protein 529##AK094618|ZNF529|57711|zinc finger protein 529##NM_001145649|ZNF529|57711|zinc finger protein 529##NM_001145650|ZNF529|57711|zinc finger protein 529	0.089093	
chr19	42299048	42299145	reg1032844.p1	3.720	+	NM_002483 TSC_hg19_v1_chr19_+_42259437 AK312542 M29541 M18728 M18216 BC005008 BT009774	-39625	+	M16234 TSC_hg19_v1_chr19_+_42221424	-77678	+	TSC_hg19_v1_chr19_+_42212619 CR749337 DQ890840 DQ896753 CU689928 M15042 X16455	-86460	+	AK298694 NM_001815 D90277 D90278 L00692 L00693 BC106728	1456	+	AY358726 NM_173506	49411	-	AK057404 AK301822 NM_001040283 BC039266 BC029202	49975	+	NM_002483|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##AK312542|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M29541|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18728|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18216|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BC005008|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BT009774|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M16234|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##CR749337|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ890840|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##DQ896753|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##M15042|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##X16455|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##NM_001815|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90277|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90278|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00692|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00693|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##BC106728|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##AY358726|LYPD4|147719|LY6/PLAUR domain containing 4##NM_173506|LYPD4|147719|LY6/PLAUR domain containing 4##AK057404|DMRTC2|63946|DMRT-like family C2##AK301822|DMRTC2|63946|DMRT-like family C2##NM_001040283|DMRTC2|63946|DMRT-like family C2##BC039266|DMRTC2|63946|DMRT-like family C2##BC029202|DMRTC2|63946|DMRT-like family C2	1.007651	CTCF.p2:8:0.980
chr22	25000325	25000474	reg1045160.p2	3.720	+	AL832738 TSC_hg19_v1_chr22_+_24999158 NM_001032364 BC035341 NM_005265 L20494 J04131	-1206	+	TSC_hg19_v1_chr22_-_24989036 BC032388 BC108684 NM_207644 AK097054	-11387	-	M24903 NM_013430	-20682	+	TSC_hg19_v1_chr22_+_25003637 NM_001032365	3224	+	AB079368 NM_001008496 AK302409 AK315806	170285	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	201811	+	AL832738|GGT1|2678|gamma-glutamyltransferase 1##NM_001032364|GGT1|2678|gamma-glutamyltransferase 1##BC035341|GGT1|2678|gamma-glutamyltransferase 1##NM_005265|GGT1|2678|gamma-glutamyltransferase 1##L20494|GGT1|2678|gamma-glutamyltransferase 1##J04131|GGT1|2678|gamma-glutamyltransferase 1##BC032388|FAM211B|388886|family with sequence similarity 211, member B##BC108684|FAM211B|388886|family with sequence similarity 211, member B##NM_207644|FAM211B|388886|family with sequence similarity 211, member B##AK097054|FAM211B|388886|family with sequence similarity 211, member B##M24903|GGT1|2678|gamma-glutamyltransferase 1##NM_013430|GGT1|2678|gamma-glutamyltransferase 1##NM_001032365|GGT1|2678|gamma-glutamyltransferase 1##AB079368|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001008496|PIWIL3|440822|piwi-like 3 (Drosophila)##AK302409|PIWIL3|440822|piwi-like 3 (Drosophila)##AK315806|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1	0.0	
chr2	71277044	71277225	reg1006607.p2	3.720	+	TSC_hg19_v1_chr2_-_71222002 NM_144582	-55130	-	AK303594 TSC_hg19_v1_chr2_-_71221955 AY358783	-55174	-	BC128461 BC128462 TSC_hg19_v1_chr2_-_71221953	-55182	-	NM_017567 TSC_hg19_v1_chr2_+_71295427	18283	+	TSC_hg19_v1_chr2_+_71295436 AK297224	18308	+	TSC_hg19_v1_chr2_+_71295777 BC001029 BC005371 AK001812 AK097223 AK222645 BC036843 AJ242910 AB463914 CU674506 CU675147 DQ892674 DQ895916 CR457271	18615	+	NM_144582|TEX261|113419|testis expressed 261##AK303594|TEX261|113419|testis expressed 261##AY358783|TEX261|113419|testis expressed 261##BC128461|TEX261|113419|testis expressed 261##BC128462|TEX261|113419|testis expressed 261##NM_017567|NAGK|55577|N-acetylglucosamine kinase##AK297224|NAGK|55577|N-acetylglucosamine kinase##BC001029|NAGK|55577|N-acetylglucosamine kinase##BC005371|NAGK|55577|N-acetylglucosamine kinase##AK001812|NAGK|55577|N-acetylglucosamine kinase##AK097223|NAGK|55577|N-acetylglucosamine kinase##AK222645|NAGK|55577|N-acetylglucosamine kinase##BC036843|NAGK|55577|N-acetylglucosamine kinase##AJ242910|NAGK|55577|N-acetylglucosamine kinase##DQ892674|NAGK|55577|N-acetylglucosamine kinase##DQ895916|NAGK|55577|N-acetylglucosamine kinase##CR457271|NAGK|55577|N-acetylglucosamine kinase	0.0	
chr4	48192983	48193074	reg1037390.p1	3.720	+	BC017829 L27071 NM_003328	-56770	-	TSC_hg19_v1_chr4_+_48018788 BC067881 CR749484 NM_207330 AK095299	-174225	+	X64802 TSC_hg19_v1_chr4_-_48018662	-174391	-	BC101711 BC101713 BC143487 NM_003215 TSC_hg19_v1_chr4_-_48271858	78807	-	BC040993 TSC_hg19_v1_chr4_+_48343485 AK291006	150383	+	TSC_hg19_v1_chr4_+_48343571 BC006139 BC007701 BC012067 NM_020846 AB040891	150585	+	BC017829|TXK|7294|TXK tyrosine kinase##L27071|TXK|7294|TXK tyrosine kinase##NM_003328|TXK|7294|TXK tyrosine kinase##BC067881|NIPAL1|152519|NIPA-like domain containing 1##CR749484|NIPAL1|152519|NIPA-like domain containing 1##NM_207330|NIPAL1|152519|NIPA-like domain containing 1##AK095299|NIPAL1|152519|NIPA-like domain containing 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1##BC101711|TEC|7006|tec protein tyrosine kinase##BC101713|TEC|7006|tec protein tyrosine kinase##BC143487|TEC|7006|tec protein tyrosine kinase##NM_003215|TEC|7006|tec protein tyrosine kinase##BC040993|SLAIN2|57606|SLAIN motif family, member 2##AK291006|SLAIN2|57606|SLAIN motif family, member 2##BC006139|SLAIN2|57606|SLAIN motif family, member 2##BC007701|SLAIN2|57606|SLAIN motif family, member 2##BC012067|SLAIN2|57606|SLAIN motif family, member 2##NM_020846|SLAIN2|57606|SLAIN motif family, member 2##AB040891|SLAIN2|57606|SLAIN motif family, member 2	0.0	
chr6	113956163	113956281	reg1029127.p2	3.720	+	AK122906 NM_001013734	-1287691	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1380327	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-1380417	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	222512	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	336050	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	336114	-	AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2	0.0	
chr6	154623334	154623461	reg1034068.p1	3.720	+	EU360599 EU362990 NM_001145287	-215756	+	L29301 NM_000914 NM_001008503 NM_001008504 NM_001008505 NM_001145282 NM_001145283 NM_001145284 NM_001145285 NM_001145286 L25119 U12569 AB590577 AK309655 AK313901 AY225404 AY364230 AY036622 AY036623 AY309001 AY309005 AY309006 AY309007 AY309008 AY309009 BC074927 AY521028	-262837	+	DQ680044 NM_001145279 NM_001145280 EU340241 EU340242 EU340243 NM_001145281	-291765	+	BX647254 NM_001130699	27817	-	AK289917 AJ310566 NM_001130700 NM_015553 TSC_hg19_v1_chr6_-_154677938	54518	-	TSC_hg19_v1_chr6_-_154831690 BC060761	208274	-	EU360599|OPRM1|4988|opioid receptor, mu 1##EU362990|OPRM1|4988|opioid receptor, mu 1##NM_001145287|OPRM1|4988|opioid receptor, mu 1##L29301|OPRM1|4988|opioid receptor, mu 1##NM_000914|OPRM1|4988|opioid receptor, mu 1##NM_001008503|OPRM1|4988|opioid receptor, mu 1##NM_001008504|OPRM1|4988|opioid receptor, mu 1##NM_001008505|OPRM1|4988|opioid receptor, mu 1##NM_001145282|OPRM1|4988|opioid receptor, mu 1##NM_001145283|OPRM1|4988|opioid receptor, mu 1##NM_001145284|OPRM1|4988|opioid receptor, mu 1##NM_001145285|OPRM1|4988|opioid receptor, mu 1##NM_001145286|OPRM1|4988|opioid receptor, mu 1##L25119|OPRM1|4988|opioid receptor, mu 1##U12569|OPRM1|4988|opioid receptor, mu 1##AK313901|OPRM1|4988|opioid receptor, mu 1##AY225404|OPRM1|4988|opioid receptor, mu 1##AY364230|OPRM1|4988|opioid receptor, mu 1##AY036622|OPRM1|4988|opioid receptor, mu 1##AY036623|OPRM1|4988|opioid receptor, mu 1##AY309001|OPRM1|4988|opioid receptor, mu 1##AY309005|OPRM1|4988|opioid receptor, mu 1##AY309006|OPRM1|4988|opioid receptor, mu 1##AY309007|OPRM1|4988|opioid receptor, mu 1##AY309008|OPRM1|4988|opioid receptor, mu 1##AY309009|OPRM1|4988|opioid receptor, mu 1##BC074927|OPRM1|4988|opioid receptor, mu 1##AY521028|OPRM1|4988|opioid receptor, mu 1##DQ680044|OPRM1|4988|opioid receptor, mu 1##NM_001145279|OPRM1|4988|opioid receptor, mu 1##NM_001145280|OPRM1|4988|opioid receptor, mu 1##EU340241|OPRM1|4988|opioid receptor, mu 1##EU340242|OPRM1|4988|opioid receptor, mu 1##EU340243|OPRM1|4988|opioid receptor, mu 1##NM_001145281|OPRM1|4988|opioid receptor, mu 1##BX647254|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130699|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##AK289917|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##AJ310566|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130700|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_015553|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##BC060761|CNKSR3|154043|CNKSR family member 3	0.0	
chr7	86773548	86773620	reg1033144.p1	3.720	+	TSC_hg19_v1_chr7_-_86688965 NM_001142749	-84606	-	AK296250 NM_152748	-178338	-	X77748 TSC_hg19_v1_chr7_+_86274130 DQ315361 DQ315362 DQ315363	-499468	+	TSC_hg19_v1_chr7_+_86781741 NM_001142326 NM_001142327 AF084530 AF202144 AF202145 AK295144 AK314622 AB209230 AK296211	8129	+	NM_021145 TSC_hg19_v1_chr7_+_86781946 BC070064	8353	+	BT006973 TSC_hg19_v1_chr7_-_86849049 BC002837 NM_024315 AK313794	75357	-	NM_001142749|KIAA1324L|222223|KIAA1324-like##AK296250|KIAA1324L|222223|KIAA1324-like##NM_152748|KIAA1324L|222223|KIAA1324-like##X77748|GRM3|2913|glutamate receptor, metabotropic 3##DQ315361|GRM3|2913|glutamate receptor, metabotropic 3##DQ315362|GRM3|2913|glutamate receptor, metabotropic 3##DQ315363|GRM3|2913|glutamate receptor, metabotropic 3##NM_001142326|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_001142327|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF084530|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AF202145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK295144|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK314622|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AB209230|DMTF1|9988|cyclin D binding myb-like transcription factor 1##AK296211|DMTF1|9988|cyclin D binding myb-like transcription factor 1##NM_021145|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BC070064|DMTF1|9988|cyclin D binding myb-like transcription factor 1##BT006973|C7orf23|79161|chromosome 7 open reading frame 23##BC002837|C7orf23|79161|chromosome 7 open reading frame 23##NM_024315|C7orf23|79161|chromosome 7 open reading frame 23##AK313794|C7orf23|79161|chromosome 7 open reading frame 23	0.0	
chr10	112327050	112327168	reg1035372.p2	3.719	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-69358	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-262409	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-262516	-	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	383	+	AF067163 TSC_hg19_v1_chr10_+_112344155	17006	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	77020	+	NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20	0.0	
chr10	30316429	30316518	reg1017944.p2	3.719	+	TSC_hg19_v1_chr10_-_30316350 BC047548	-42	-	TSC_hg19_v1_chr10_-_30025865 AK307640	-290567	-	TSC_hg19_v1_chr10_-_30024866 AF051850 NM_003174	-291709	-	TSC_hg19_v1_chr10_-_30348516 AK308850 NM_020848 BC071601	32021	-	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	321760	-	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	406466	+	BC047548|KIAA1462|57608|KIAA1462##AK307640|SVIL|6840|supervillin##AF051850|SVIL|6840|supervillin##NM_003174|SVIL|6840|supervillin##AK308850|KIAA1462|57608|KIAA1462##NM_020848|KIAA1462|57608|KIAA1462##BC071601|KIAA1462|57608|KIAA1462##AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8	0.0	
chr1	207086155	207086241	reg1002214.p2	3.719	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	-15398	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	-47023	+	AF453946 NM_013371	-83977	+	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	9089	-	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	33563	-	AK298394 NM_001122979 NM_001170631 NM_032029	57758	-	NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity	0.0	
chr12	31855082	31855213	reg1034589.p1	3.719	+	NM_001135863 TSC_hg19_v1_chr12_+_31812621 AL832339 BC039107	-42533	+	BC039535 NM_173802	-43027	+	AK290248 NM_001135864	-55054	+	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	26827	-	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	26909	-	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	90057	-	NM_001135863|METTL20|254013|methyltransferase like 20##AL832339|METTL20|254013|methyltransferase like 20##BC039107|METTL20|254013|methyltransferase like 20##BC039535|METTL20|254013|methyltransferase like 20##NM_173802|METTL20|254013|methyltransferase like 20##AK290248|METTL20|254013|methyltransferase like 20##NM_001135864|METTL20|254013|methyltransferase like 20##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C	0.189562	
chr19	5001671	5001801	reg1039791.p1	3.719	+	TSC_hg19_v1_chr19_+_4969167 AB020683 BC063889	-32563	+	NM_015015 TSC_hg19_v1_chr19_+_4969124	-32612	+	TSC_hg19_v1_chr19_-_4916833 AK097879	-84908	-	TSC_hg19_v1_chr19_+_5032899 CU687848	31163	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	339058	-	AK098722 NM_181710 AK292251 BC017592	453690	+	AB020683|KDM4B|23030|lysine (K)-specific demethylase 4B##BC063889|KDM4B|23030|lysine (K)-specific demethylase 4B##NM_015015|KDM4B|23030|lysine (K)-specific demethylase 4B##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4	0.204979	CTCF.p2:3:0.205
chr4	182162724	182162851	reg1039507.p2	3.719	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-3799144	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-3799194	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-3799246	-	TSC_hg19_v1_chr4_+_183065111 AK308489	902338	+	NM_001080477 HE578284 HE578285	1082367	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	1675743	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.0	
chr7	69264198	69264303	reg1037964.p1	3.719	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-199662	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-199921	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-200414	+	TSC_hg19_v1_chr7_+_70231164 AK296981	966955	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1333538	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2537528	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.291021	CTCF.p2:2:0.291
chr8	126649782	126649887	reg1032774.p1	3.719	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-207255	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-545737	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-545777	-	TSC_hg19_v1_chr8_-_126963395 BX648371	313579	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	920721	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	920890	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.0	
chr9	41196171	41196251	reg1033084.p1	3.719	+	AK057375 AK292150 NM_033160	-404125	-	NM_001083124	-495921	+	AK302569 NM_001040065 NM_001085452 BC146855	-1311250	+	BC040528 NM_001113541 NM_015667 NM_001242613	131168	-	BC040528 NM_001113541 NM_015667	304467	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	758703	-	AK057375|ZNF658|26149|zinc finger protein 658##AK292150|ZNF658|26149|zinc finger protein 658##NM_033160|ZNF658|26149|zinc finger protein 658##NM_001083124|FAM75A3|727830|family with sequence similarity 75, member A3##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881	0.397076	CTCF.p2:1:0.397
chr11	117875964	117876135	reg1041905.p1	3.718	+	TSC_hg19_v1_chr11_+_117857155 U00672 BC028082 AB590303 CU688390 DQ891031 DQ893720 AK316146 AB209626	-18762	+	TSC_hg19_v1_chr11_+_117857108 AK291645 AK301484 NM_001558 AK301260 AK316342 AK313049 AK301492	-18959	+	BC018715 AK300283 AB048796 AB048797 BC114928 AY190317 AK027798 TSC_hg19_v1_chr11_-_117800150 NM_001077263 NM_001206789 NM_001206790 NM_001244995	-75932	-	NM_001083947 NM_001173551 NM_001173552 NM_019894 AK304113 AK311290 TSC_hg19_v1_chr11_+_117947754	71694	+	BC004855 TSC_hg19_v1_chr11_+_117947792 AK308434 AK296855 AK303173 AK290361 AK304215 AF179224 AY358530 AF216312 BC011703 AK172766	71778	+	TSC_hg19_v1_chr11_-_118016149 BC035017 NM_001142349	140109	-	U00672|IL10RA|3587|interleukin 10 receptor, alpha##BC028082|IL10RA|3587|interleukin 10 receptor, alpha##DQ891031|IL10RA|3587|interleukin 10 receptor, alpha##DQ893720|IL10RA|3587|interleukin 10 receptor, alpha##AK316146|IL10RA|3587|interleukin 10 receptor, alpha##AB209626|IL10RA|3587|interleukin 10 receptor, alpha##AK291645|IL10RA|3587|interleukin 10 receptor, alpha##AK301484|IL10RA|3587|interleukin 10 receptor, alpha##NM_001558|IL10RA|3587|interleukin 10 receptor, alpha##AK301260|IL10RA|3587|interleukin 10 receptor, alpha##AK316342|IL10RA|3587|interleukin 10 receptor, alpha##AK313049|IL10RA|3587|interleukin 10 receptor, alpha##AK301492|IL10RA|3587|interleukin 10 receptor, alpha##BC018715|TMPRSS13|84000|transmembrane protease, serine 13##AK300283|TMPRSS13|84000|transmembrane protease, serine 13##AB048796|TMPRSS13|84000|transmembrane protease, serine 13##AB048797|TMPRSS13|84000|transmembrane protease, serine 13##BC114928|TMPRSS13|84000|transmembrane protease, serine 13##AY190317|TMPRSS13|84000|transmembrane protease, serine 13##AK027798|TMPRSS13|84000|transmembrane protease, serine 13##NM_001077263|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206789|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206790|TMPRSS13|84000|transmembrane protease, serine 13##NM_001244995|TMPRSS13|84000|transmembrane protease, serine 13##NM_001083947|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173551|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173552|TMPRSS4|56649|transmembrane protease, serine 4##NM_019894|TMPRSS4|56649|transmembrane protease, serine 4##AK304113|TMPRSS4|56649|transmembrane protease, serine 4##BC004855|TMPRSS4|56649|transmembrane protease, serine 4##AK308434|TMPRSS4|56649|transmembrane protease, serine 4##AK296855|TMPRSS4|56649|transmembrane protease, serine 4##AK303173|TMPRSS4|56649|transmembrane protease, serine 4##AK290361|TMPRSS4|56649|transmembrane protease, serine 4##AK304215|TMPRSS4|56649|transmembrane protease, serine 4##AF179224|TMPRSS4|56649|transmembrane protease, serine 4##AY358530|TMPRSS4|56649|transmembrane protease, serine 4##AF216312|TMPRSS4|56649|transmembrane protease, serine 4##BC011703|TMPRSS4|56649|transmembrane protease, serine 4##AK172766|TMPRSS4|56649|transmembrane protease, serine 4##BC035017|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_001142349|SCN4B|6330|sodium channel, voltage-gated, type IV, beta	0.556902	CTCF.p2:41:0.557
chr1	116916909	116916975	reg1035711.p1	3.718	+	AK295095 NM_001160233	-454	+	AK308418 TSC_hg19_v1_chr1_+_116916033 DQ891882 EU176649	-864	+	TSC_hg19_v1_chr1_+_116915952 AK314777	-994	+	AK296362 NM_001160234	9049	+	TSC_hg19_v1_chr1_-_116961205 BC007373 BC018892 BC028281 BC069003 AK309872 BC098428	44248	-	TSC_hg19_v1_chr1_-_116961216 AK309389	44296	-	AK295095|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##NM_001160233|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK308418|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##DQ891882|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##EU176649|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK314777|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC007373|ATP1A1OS|84852|ATP1A1 opposite strand##BC018892|ATP1A1OS|84852|ATP1A1 opposite strand##BC028281|ATP1A1OS|84852|ATP1A1 opposite strand##BC069003|ATP1A1OS|84852|ATP1A1 opposite strand##AK309872|ATP1A1OS|84852|ATP1A1 opposite strand##BC098428|ATP1A1OS|84852|ATP1A1 opposite strand##AK309389|ATP1A1OS|84852|ATP1A1 opposite strand	0.0	
chr1	45241190	45241356	reg1031553.p2	3.718	+	AK311854 D28361 NM_001012 BC022070 BC070875	-22	+	TSC_hg19_v1_chr1_+_45205568 AK290688 AB590244 BT006759 CR450302 CU677119 CU679091 DQ893800 EU176178	-35692	+	AK124208 AK300756 AK312606 TSC_hg19_v1_chr1_+_45205533 BC008764 U63743 BC014924	-35731	+	AF440757 AY515707 BC101823 NM_153274	12127	-	AJ293866 TSC_hg19_v1_chr1_+_45266017	24683	+	BC013899 NM_004073 TSC_hg19_v1_chr1_+_45266045	24768	+	AK311854|RPS8|6202|ribosomal protein S8##NM_001012|RPS8|6202|ribosomal protein S8##BC022070|RPS8|6202|ribosomal protein S8##BC070875|RPS8|6202|ribosomal protein S8##AK290688|KIF2C|11004|kinesin family member 2C##BT006759|KIF2C|11004|kinesin family member 2C##CR450302|KIF2C|11004|kinesin family member 2C##DQ893800|KIF2C|11004|kinesin family member 2C##EU176178|KIF2C|11004|kinesin family member 2C##AK300756|KIF2C|11004|kinesin family member 2C##AK312606|KIF2C|11004|kinesin family member 2C##BC008764|KIF2C|11004|kinesin family member 2C##U63743|KIF2C|11004|kinesin family member 2C##BC014924|KIF2C|11004|kinesin family member 2C##AF440757|BEST4|266675|bestrophin 4##AY515707|BEST4|266675|bestrophin 4##BC101823|BEST4|266675|bestrophin 4##NM_153274|BEST4|266675|bestrophin 4##AJ293866|PLK3|1263|polo-like kinase 3##BC013899|PLK3|1263|polo-like kinase 3##NM_004073|PLK3|1263|polo-like kinase 3	0.0	
chr16	67596012	67596135	reg1023635.p2	3.718	+	BC041086 AK023787 TSC_hg19_v1_chr16_+_67573861 BC098587	-22209	+	AK097087 TSC_hg19_v1_chr16_+_67572105	-24029	+	TSC_hg19_v1_chr16_+_67571364 NM_001193524 BC021284 AK295677	-24686	+	AK314804 NM_001191022 NM_006565 TSC_hg19_v1_chr16_+_67596455 U25435 AB209793 BC014267	321	+	TSC_hg19_v1_chr16_+_67679038 AB113647 NM_001013838	82953	+	TSC_hg19_v1_chr16_+_67679059 FJ026014 AL832446	83044	+	BC041086|FAM65A|79567|family with sequence similarity 65, member A##AK023787|FAM65A|79567|family with sequence similarity 65, member A##BC098587|FAM65A|79567|family with sequence similarity 65, member A##AK097087|FAM65A|79567|family with sequence similarity 65, member A##NM_001193524|FAM65A|79567|family with sequence similarity 65, member A##AK295677|FAM65A|79567|family with sequence similarity 65, member A##AK314804|CTCF|10664|CCCTC-binding factor (zinc finger protein)##NM_001191022|CTCF|10664|CCCTC-binding factor (zinc finger protein)##NM_006565|CTCF|10664|CCCTC-binding factor (zinc finger protein)##U25435|CTCF|10664|CCCTC-binding factor (zinc finger protein)##AB209793|CTCF|10664|CCCTC-binding factor (zinc finger protein)##BC014267|CTCF|10664|CCCTC-binding factor (zinc finger protein)##AB113647|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##NM_001013838|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##FJ026014|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##AL832446|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing	0.0	
chr20	58327464	58327599	reg1030918.p2	3.718	+	AB098521 AB098522 NM_183244 NM_183246	-31267	+	AJ617581 NM_001199506 AK316047	-75815	+	BC108303 AJ311122 NM_080672 TSC_hg19_v1_chr20_+_58179660 BC117362 BC117364	-147877	+	BC132864 BC132870 NM_014258	179659	-	BX648091 BX649108 BC146798 TSC_hg19_v1_chr20_-_58508726	181176	-	AK125073 NM_001190826	181287	+	AB098521|PHACTR3|116154|phosphatase and actin regulator 3##AB098522|PHACTR3|116154|phosphatase and actin regulator 3##NM_183244|PHACTR3|116154|phosphatase and actin regulator 3##NM_183246|PHACTR3|116154|phosphatase and actin regulator 3##AJ617581|PHACTR3|116154|phosphatase and actin regulator 3##NM_001199506|PHACTR3|116154|phosphatase and actin regulator 3##AK316047|PHACTR3|116154|phosphatase and actin regulator 3##BC108303|PHACTR3|116154|phosphatase and actin regulator 3##AJ311122|PHACTR3|116154|phosphatase and actin regulator 3##NM_080672|PHACTR3|116154|phosphatase and actin regulator 3##BC117362|PHACTR3|116154|phosphatase and actin regulator 3##BC117364|PHACTR3|116154|phosphatase and actin regulator 3##BC132864|SYCP2|10388|synaptonemal complex protein 2##BC132870|SYCP2|10388|synaptonemal complex protein 2##NM_014258|SYCP2|10388|synaptonemal complex protein 2##BX648091|SYCP2|10388|synaptonemal complex protein 2##BX649108|SYCP2|10388|synaptonemal complex protein 2##BC146798|SYCP2|10388|synaptonemal complex protein 2##AK125073|C20orf177|63939|chromosome 20 open reading frame 177##NM_001190826|C20orf177|63939|chromosome 20 open reading frame 177	0.0	
chr3	128523138	128523273	reg1030412.p2	3.718	+	TSC_hg19_v1_chr3_+_128445036 AK298344	-78168	+	TSC_hg19_v1_chr3_+_128445035 AK000826 AK308934 BC008721	-78171	+	TSC_hg19_v1_chr3_+_128445026 AK290721	-78177	+	TSC_hg19_v1_chr3_+_128532268 AF119891	9130	+	NM_014049 TSC_hg19_v1_chr3_+_128598429	75176	+	TSC_hg19_v1_chr3_+_128598453 BC007970	75243	+	AK298344|RAB7A|7879|RAB7A, member RAS oncogene family##AK000826|RAB7A|7879|RAB7A, member RAS oncogene family##AK308934|RAB7A|7879|RAB7A, member RAS oncogene family##BC008721|RAB7A|7879|RAB7A, member RAS oncogene family##AK290721|RAB7A|7879|RAB7A, member RAS oncogene family##NM_014049|ACAD9|28976|acyl-CoA dehydrogenase family, member 9##BC007970|ACAD9|28976|acyl-CoA dehydrogenase family, member 9	0.0	
chr3	44727206	44727335	reg1034954.p1	3.718	+	TSC_hg19_v1_chr3_+_44692500 AB528014 BT006962	-34729	+	TSC_hg19_v1_chr3_+_44690232 NM_003420 AK300581 AK314821 BC013597 BC015892 X07289	-37024	+	TSC_hg19_v1_chr3_+_44666527 AY279353 NM_001024855 NM_006991 AK314196 AY074878 BC031209	-60727	+	NM_001134440 NM_001134441 NM_001134442 NM_033210 AK027761 BC028377 TSC_hg19_v1_chr3_+_44754144	26873	+	AK316574 AK054613 AK297216 BC013762 NM_145044	43840	+	TSC_hg19_v1_chr3_-_44803112 BC016790 BC070360 AK289549 BC008468 NM_020696	75863	-	BT006962|ZNF35|7584|zinc finger protein 35##NM_003420|ZNF35|7584|zinc finger protein 35##AK300581|ZNF35|7584|zinc finger protein 35##AK314821|ZNF35|7584|zinc finger protein 35##BC013597|ZNF35|7584|zinc finger protein 35##BC015892|ZNF35|7584|zinc finger protein 35##X07289|ZNF35|7584|zinc finger protein 35##AY279353|ZNF197|10168|zinc finger protein 197##NM_001024855|ZNF197|10168|zinc finger protein 197##NM_006991|ZNF197|10168|zinc finger protein 197##AK314196|ZNF197|10168|zinc finger protein 197##AY074878|ZNF197|10168|zinc finger protein 197##BC031209|ZNF197|10168|zinc finger protein 197##NM_001134440|ZNF502|91392|zinc finger protein 502##NM_001134441|ZNF502|91392|zinc finger protein 502##NM_001134442|ZNF502|91392|zinc finger protein 502##NM_033210|ZNF502|91392|zinc finger protein 502##AK027761|ZNF502|91392|zinc finger protein 502##BC028377|ZNF502|91392|zinc finger protein 502##AK316574|ZNF501|115560|zinc finger protein 501##AK054613|ZNF501|115560|zinc finger protein 501##AK297216|ZNF501|115560|zinc finger protein 501##BC013762|ZNF501|115560|zinc finger protein 501##NM_145044|ZNF501|115560|zinc finger protein 501##BC016790|KIAA1143|57456|KIAA1143##BC070360|KIAA1143|57456|KIAA1143##AK289549|KIAA1143|57456|KIAA1143##BC008468|KIAA1143|57456|KIAA1143##NM_020696|KIAA1143|57456|KIAA1143	0.0	
chr9	92157605	92157723	reg1037113.p1	3.718	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-44657	-	BC054500 NM_001142287 NM_006378	-63054	-	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-224246	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	62317	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	1247455	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1406372	+	BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase	0.0	
chr10	6168370	6168437	reg1042381.p2	3.717	+	TSC_hg19_v1_chr10_+_6131035 BC007871 BC039322 NM_001145547	-37232	+	TSC_hg19_v1_chr10_+_6131024 AF542550 AK314952	-37404	+	TSC_hg19_v1_chr10_+_6130954 NM_032905	-37454	+	AK302518 TSC_hg19_v1_chr10_+_6186860 NM_001145443	18413	+	TSC_hg19_v1_chr10_+_6186890 AK131307	18481	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	18509	+	BC007871|RBM17|84991|RNA binding motif protein 17##BC039322|RBM17|84991|RNA binding motif protein 17##NM_001145547|RBM17|84991|RNA binding motif protein 17##AF542550|RBM17|84991|RNA binding motif protein 17##AK314952|RBM17|84991|RNA binding motif protein 17##NM_032905|RBM17|84991|RNA binding motif protein 17##NM_001145443|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	0.612237	CTCF.p2:1:0.612
chr11	120435800	120435942	reg1039102.p1	3.717	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-53406	+	BC063117 NM_001198665 NM_015313	-228254	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	-228767	+	AB384776 NM_014619 S67803	95156	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	458939	+	NM_005422	537503	+	AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha	0.0	
chr11	66362923	66363092	reg1035691.p1	3.717	+	TSC_hg19_v1_chr11_+_66360672 AY113179 AF002210 NM_005125 BC105016 BC112055 CR541928	-2309	+	CU689898 TSC_hg19_v1_chr11_-_66360516 AK001648 BC034469 NM_018219	-2486	-	DQ893245 AJ007331 TSC_hg19_v1_chr11_-_66336078 AK313657 BC036451 AF136279 BC011682 BC013359 AF088886 NM_003793	-26982	-	NM_001198836 NM_001198837 NM_001198845 NM_001198846 NM_006328 TSC_hg19_v1_chr11_+_66384100 AF315632 AF315633 EU287938 AK222830 AK297907 AK307254 AK021768 AK292805 AF080561 BC000488 BC023619 DQ294957 EU287939 EU446504	21114	+	AB464693 TSC_hg19_v1_chr11_+_66395849	32784	+	NM_001198843 NM_001198844 NM_002896 TSC_hg19_v1_chr11_+_66406176 AK303984 BC021120 AK225071 BC032735	43126	+	AY113179|CCS|9973|copper chaperone for superoxide dismutase##AF002210|CCS|9973|copper chaperone for superoxide dismutase##NM_005125|CCS|9973|copper chaperone for superoxide dismutase##BC105016|CCS|9973|copper chaperone for superoxide dismutase##BC112055|CCS|9973|copper chaperone for superoxide dismutase##CR541928|CCS|9973|copper chaperone for superoxide dismutase##AK001648|CCDC87|55231|coiled-coil domain containing 87##BC034469|CCDC87|55231|coiled-coil domain containing 87##NM_018219|CCDC87|55231|coiled-coil domain containing 87##DQ893245|CTSF|8722|cathepsin F##AJ007331|CTSF|8722|cathepsin F##AK313657|CTSF|8722|cathepsin F##BC036451|CTSF|8722|cathepsin F##AF136279|CTSF|8722|cathepsin F##BC011682|CTSF|8722|cathepsin F##BC013359|CTSF|8722|cathepsin F##AF088886|CTSF|8722|cathepsin F##NM_003793|CTSF|8722|cathepsin F##NM_001198836|RBM14|10432|RNA binding motif protein 14##NM_001198837|RBM14|10432|RNA binding motif protein 14##NM_001198845|RBM14-RBM4|100526737|RBM14-RBM4 readthrough##NM_001198846|RBM14-RBM4|100526737|RBM14-RBM4 readthrough##NM_006328|RBM14|10432|RNA binding motif protein 14##AF315632|RBM14|10432|RNA binding motif protein 14##AF315633|RBM14|10432|RNA binding motif protein 14##AK222830|RBM14|10432|RNA binding motif protein 14##AK021768|RBM14|10432|RNA binding motif protein 14##AF080561|RBM14|10432|RNA binding motif protein 14##BC000488|RBM14|10432|RNA binding motif protein 14##BC023619|RBM14|10432|RNA binding motif protein 14##DQ294957|RBM14|10432|RNA binding motif protein 14##EU446504|RBM14|10432|RNA binding motif protein 14##NM_001198843|RBM4|5936|RNA binding motif protein 4##NM_001198844|RBM4|5936|RNA binding motif protein 4##NM_002896|RBM4|5936|RNA binding motif protein 4##AK303984|RBM4|5936|RNA binding motif protein 4##BC021120|RBM4|5936|RNA binding motif protein 4##AK225071|RBM4|5936|RNA binding motif protein 4##BC032735|RBM4|5936|RNA binding motif protein 4	0.0	
chr12	120891859	120891948	reg1034531.p1	3.717	+	BC047778 BC064523 TSC_hg19_v1_chr12_+_120884274 BC034962 BC107145 BC107146	-7619	+	TSC_hg19_v1_chr12_+_120884261 NM_176818 AK094319	-7683	+	U75688 DQ893091 DQ896363 AF161481 AK312006 BC055313 BC002638 NM_016399	-7714	-	AB528895 TSC_hg19_v1_chr12_-_120907495 U30825 BC093971 BC093973 AK290644	15551	-	TSC_hg19_v1_chr12_-_120907522 AK294254 AK309778	15617	-	TSC_hg19_v1_chr12_-_120907535 NM_003769	15671	-	BC047778|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC064523|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC034962|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC107145|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##BC107146|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##NM_176818|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##AK094319|GATC|283459|glutamyl-tRNA(Gln) amidotransferase, subunit C homolog (bacterial)##U75688|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ893091|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##DQ896363|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AF161481|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##AK312006|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC055313|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##BC002638|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##NM_016399|TRIAP1|51499|TP53 regulated inhibitor of apoptosis 1##U30825|SRSF9|8683|serine/arginine-rich splicing factor 9##BC093971|SRSF9|8683|serine/arginine-rich splicing factor 9##BC093973|SRSF9|8683|serine/arginine-rich splicing factor 9##AK290644|SRSF9|8683|serine/arginine-rich splicing factor 9##AK294254|SRSF9|8683|serine/arginine-rich splicing factor 9##NM_003769|SRSF9|8683|serine/arginine-rich splicing factor 9	0.0	
chr1	220219916	220220060	reg1034741.p1	3.717	+	TSC_hg19_v1_chr1_-_220219923 BC046156 NM_004446	-52	-	TSC_hg19_v1_chr1_-_220219873 AK296755 BC067841	-125	-	TSC_hg19_v1_chr1_-_220219848 BC058921 CR933648	-146	-	TSC_hg19_v1_chr1_-_220263112 AF125042 AK291943 BC017801 AK298476 AK300777	43133	-	AJ249339 TSC_hg19_v1_chr1_-_220263167 AK315962 NM_006085	43186	-	TSC_hg19_v1_chr1_+_220267461 AY267462 NM_018060 BC137438	47464	+	BC046156|EPRS|2058|glutamyl-prolyl-tRNA synthetase##NM_004446|EPRS|2058|glutamyl-prolyl-tRNA synthetase##AK296755|EPRS|2058|glutamyl-prolyl-tRNA synthetase##BC067841|EPRS|2058|glutamyl-prolyl-tRNA synthetase##BC058921|EPRS|2058|glutamyl-prolyl-tRNA synthetase##CR933648|EPRS|2058|glutamyl-prolyl-tRNA synthetase##AF125042|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AK291943|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##BC017801|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AK298476|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AK300777|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AJ249339|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AK315962|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##NM_006085|BPNT1|10380|3'(2'), 5'-bisphosphate nucleotidase 1##AY267462|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##NM_018060|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial##BC137438|IARS2|55699|isoleucyl-tRNA synthetase 2, mitochondrial	0.0	
chr13	53226973	53227123	reg1040176.p1	3.717	+	NM_001130912 NM_006704 TSC_hg19_v1_chr13_+_53227044 AJ344097 AK292128 AY321358 AK302363 AY271314 BC000911 AK291402 AB528309 AF132856 BT009798 DQ890945 DQ894108	-106	+	TSC_hg19_v1_chr13_+_53216565 BC108266	-10483	+	TSC_hg19_v1_chr13_+_53191659 NM_001011724 NM_001011725 BC007108 AK123159 BC082242	-35411	+	AB006000 CR541910 TSC_hg19_v1_chr13_-_53313891	86816	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	86914	-	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	195727	-	NM_001130912|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##NM_006704|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AJ344097|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK292128|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY321358|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK302363|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY271314|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC000911|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK291402|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF132856|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BT009798|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ890945|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ894108|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001011724|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001011725|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##AK123159|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##BC082242|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##AB006000|LECT1|11061|leukocyte cell derived chemotaxin 1##CR541910|LECT1|11061|leukocyte cell derived chemotaxin 1##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8	0.0	
chr15	93187333	93187409	reg1037986.p2	3.717	+	AK057393 NM_153040	-172465	+	TSC_hg19_v1_chr15_+_92937110 NM_006011 AK313924 BC069584 BC096202 BC096203 BC096204 BC096205 U82762 U33551	-250172	+	TSC_hg19_v1_chr15_+_92397563 AK097797 AK310306	-789804	+	BC045729 TSC_hg19_v1_chr15_-_93198980 BC060873 AK075564 NM_207446	11508	-	BC110328 TSC_hg19_v1_chr15_-_93277463	90018	-	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	256115	+	AK057393|C15orf32|145858|chromosome 15 open reading frame 32##NM_153040|C15orf32|145858|chromosome 15 open reading frame 32##NM_006011|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK313924|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC069584|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096202|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096203|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096204|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##BC096205|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U82762|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##U33551|ST8SIA2|8128|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2##AK097797|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##AK310306|SLCO3A1|28232|solute carrier organic anion transporter family, member 3A1##BC045729|FAM174B|400451|family with sequence similarity 174, member B##BC060873|FAM174B|400451|family with sequence similarity 174, member B##AK075564|FAM174B|400451|family with sequence similarity 174, member B##NM_207446|FAM174B|400451|family with sequence similarity 174, member B##BC110328|FAM174B|400451|family with sequence similarity 174, member B##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2	0.0	
chr16	50711499	50711584	reg1035450.p1	3.717	+	TSC_hg19_v1_chr16_-_50647562 AK124375	-63963	-	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	-129215	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	-308711	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	3636	-	TSC_hg19_v1_chr16_-_50715246 NM_001144972 NM_153337 NM_182854	3760	-	AF178930 AY187243 NM_022162 AY187244 AY187246 AB527390	19560	+	BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20##NM_001144972|SNX20|124460|sorting nexin 20##NM_153337|SNX20|124460|sorting nexin 20##NM_182854|SNX20|124460|sorting nexin 20##AF178930|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187243|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_022162|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187244|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187246|NOD2|64127|nucleotide-binding oligomerization domain containing 2	0.66438	CTCF.p2:-5:0.664
chr17	73408565	73408742	reg1004181.p1	3.717	+	NM_002086 NM_203506 TSC_hg19_v1_chr17_-_73401791	-6850	-	TSC_hg19_v1_chr17_-_73401781 AK315565	-6874	-	TSC_hg19_v1_chr17_-_73401738 BC000631	-6919	-	NM_014738 TSC_hg19_v1_chr17_+_73452737 AK308160 BC042942 AK304819 D83779 BC045540	44085	+	AK316060 TSC_hg19_v1_chr17_+_73472617 AK294526 CR936809	63949	+	AK300354 NM_001142643 AK315936	97288	-	NM_002086|GRB2|2885|growth factor receptor-bound protein 2##NM_203506|GRB2|2885|growth factor receptor-bound protein 2##AK315565|GRB2|2885|growth factor receptor-bound protein 2##BC000631|GRB2|2885|growth factor receptor-bound protein 2##NM_014738|KIAA0195|9772|KIAA0195##AK308160|KIAA0195|9772|KIAA0195##BC042942|KIAA0195|9772|KIAA0195##AK304819|KIAA0195|9772|KIAA0195##D83779|KIAA0195|9772|KIAA0195##BC045540|KIAA0195|9772|KIAA0195##AK316060|KIAA0195|9772|KIAA0195##AK294526|KIAA0195|9772|KIAA0195##CR936809|KIAA0195|9772|KIAA0195##AK300354|CASKIN2|57513|CASK interacting protein 2##NM_001142643|CASKIN2|57513|CASK interacting protein 2##AK315936|CASKIN2|57513|CASK interacting protein 2	0.0	
chr19	53290087	53290242	reg1037378.p2	3.717	+	BX640933 AK131231 NM_198457	-140	-	BC028590 AK091389 AX746954 NM_001161501 NM_001161499 NM_001161500	-51866	-	AK097434 NM_030972	-57030	-	CR933598 AK304704 BC070146 AK293074 NM_006969	34738	-	TSC_hg19_v1_chr19_-_53360854 AX721127 CR936599 AK292449 CR936695 AK289841 AY442330 AY442331 NM_001008801 NM_199132	70712	-	NM_207333	104434	-	BX640933|ZNF600|162966|zinc finger protein 600##AK131231|ZNF600|162966|zinc finger protein 600##NM_198457|ZNF600|162966|zinc finger protein 600##BC028590|ZNF611|81856|zinc finger protein 611##AK091389|ZNF611|81856|zinc finger protein 611##NM_001161501|ZNF611|81856|zinc finger protein 611##NM_001161499|ZNF611|81856|zinc finger protein 611##NM_001161500|ZNF611|81856|zinc finger protein 611##AK097434|ZNF611|81856|zinc finger protein 611##NM_030972|ZNF611|81856|zinc finger protein 611##CR933598|ZNF28|7576|zinc finger protein 28##AK304704|ZNF28|7576|zinc finger protein 28##BC070146|ZNF28|7576|zinc finger protein 28##AK293074|ZNF28|7576|zinc finger protein 28##NM_006969|ZNF28|7576|zinc finger protein 28##CR936599|ZNF468|90333|zinc finger protein 468##AK292449|ZNF468|90333|zinc finger protein 468##CR936695|ZNF468|90333|zinc finger protein 468##AK289841|ZNF468|90333|zinc finger protein 468##AY442330|ZNF468|90333|zinc finger protein 468##AY442331|ZNF468|90333|zinc finger protein 468##NM_001008801|ZNF468|90333|zinc finger protein 468##NM_199132|ZNF468|90333|zinc finger protein 468##NM_207333|ZNF320|162967|zinc finger protein 320	0.163602	
chr2	64751161	64751300	reg1035500.p1	3.717	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	-69582	+	TSC_hg19_v1_chr2_+_64681295 NM_014181	-69930	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-379706	-	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	254	+	TSC_hg19_v1_chr2_+_64751580 AL833962	372	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	129619	-	BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##AL833962|AFTPH|54812|aftiphilin##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2	0.0	
chr6	331624	331762	reg1021915.p1	3.717	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-39196	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-39608	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	60071	+	AF508547 BC101697 BC101699 NM_148959	325260	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	361397	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chr7	127848721	127848829	reg1014093.p2	3.717	+	BC111561 BC111745 AF196976 AJ297858 NM_022143 AK172751 TSC_hg19_v1_chr7_-_127671066 AK314047	-177739	-	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	-556439	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	-556539	+	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	32558	+	CU680694 TSC_hg19_v1_chr7_-_127983862	135079	-	TSC_hg19_v1_chr7_-_127983944 BC013889 AK222716 AK300500 AK295976 AK001239 NM_001166135 NM_018077	135161	-	BC111561|LRRC4|64101|leucine rich repeat containing 4##BC111745|LRRC4|64101|leucine rich repeat containing 4##AF196976|LRRC4|64101|leucine rich repeat containing 4##AJ297858|LRRC4|64101|leucine rich repeat containing 4##NM_022143|LRRC4|64101|leucine rich repeat containing 4##AK172751|LRRC4|64101|leucine rich repeat containing 4##AK314047|LRRC4|64101|leucine rich repeat containing 4##BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin##BC013889|RBM28|55131|RNA binding motif protein 28##AK222716|RBM28|55131|RNA binding motif protein 28##AK300500|RBM28|55131|RNA binding motif protein 28##AK001239|RBM28|55131|RNA binding motif protein 28##NM_001166135|RBM28|55131|RNA binding motif protein 28##NM_018077|RBM28|55131|RNA binding motif protein 28	0.011504	
chr8	7923063	7923243	reg1001184.p2	3.717	+	AK292586 NM_001193630	-139295	+	BC069285 NM_004942 BC093985 BC093983 Z71389	-170949	+	AF295370 AJ237673 NM_018661 AB037972 AB590071 AF217245 AF516673	-184228	+	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	162989	+	TSC_hg19_v1_chr8_-_8175862 AF075060	252735	-	AK122582 NM_001080826	316069	-	AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##BC069285|DEFB4A|1673|defensin, beta 4A##NM_004942|DEFB4A|1673|defensin, beta 4A##BC093985|DEFB4A|1673|defensin, beta 4A##BC093983|DEFB4A|1673|defensin, beta 4A##Z71389|DEFB4A|1673|defensin, beta 4A##AF295370|DEFB103B|55894|defensin, beta 103B##AJ237673|DEFB103B|55894|defensin, beta 103B##NM_018661|DEFB103B|55894|defensin, beta 103B##AB037972|DEFB103B|55894|defensin, beta 103B##AF217245|DEFB103B|55894|defensin, beta 103B##AF516673|DEFB103B|55894|defensin, beta 103B##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2	0.0	
chr1	117591697	117591865	reg1032529.p2	3.716	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	-47376	+	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	-139139	+	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	-294674	+	AK291017 TSC_hg19_v1_chr1_+_117602939	11143	+	TSC_hg19_v1_chr1_+_117602948 AF073771 NM_003594 AF080255 BC015341 BC030058	11173	+	AK023243 AK222901 BC034943 AY669488 NM_001145635 NM_025188	72598	-	AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##AK291017|TTF2|8458|transcription termination factor, RNA polymerase II##AF073771|TTF2|8458|transcription termination factor, RNA polymerase II##NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II##AF080255|TTF2|8458|transcription termination factor, RNA polymerase II##BC015341|TTF2|8458|transcription termination factor, RNA polymerase II##BC030058|TTF2|8458|transcription termination factor, RNA polymerase II##AK023243|TRIM45|80263|tripartite motif containing 45##AK222901|TRIM45|80263|tripartite motif containing 45##BC034943|TRIM45|80263|tripartite motif containing 45##AY669488|TRIM45|80263|tripartite motif containing 45##NM_001145635|TRIM45|80263|tripartite motif containing 45##NM_025188|TRIM45|80263|tripartite motif containing 45	0.0	
chr1	203328240	203328366	reg1038402.p1	3.716	+	TSC_hg19_v1_chr1_-_203320290 NM_002023	-8015	-	AK172740 TSC_hg19_v1_chr1_-_203320256	-8042	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	-8094	-	NM_002725 NM_201348 TSC_hg19_v1_chr1_+_203444937	116606	+	U29089 BC032498 TSC_hg19_v1_chr1_+_203444965	116657	+	AJ133790 AY077681 NM_014359 AF161702	134978	+	NM_002023|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin##NM_002725|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_201348|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##U29089|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##BC032498|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin	0.032839	
chr1	24275764	24275872	reg1041108.p1	3.716	+	BC069722 NM_001841 X74328 FJ357036	-36014	-	CU675950 TSC_hg19_v1_chr1_-_24194781 M29877 AB074175 AK092914 AK095443 AK095455 AK225468 AK301302 AK310143 AK314649 AX747804 BC017338 AK295535 NM_000147	-81009	-	TSC_hg19_v1_chr1_-_24151934 NM_000191 NM_001166059	-123870	-	NM_017761 TSC_hg19_v1_chr1_+_24286310	10487	+	TSC_hg19_v1_chr1_+_24286317 AF151042 AK300522 BC068475 AK311305 BC001959 BC085018 BC078177 AF374386	10528	+	TSC_hg19_v1_chr1_-_24306818 AF449427 CU674556 AB528881 AY150180 AY150181 AF047448 AF067730 AY007101 BC010074 BC005039 AK001286 AK001656 BC071575 AF419331	30965	-	BC069722|CNR2|1269|cannabinoid receptor 2 (macrophage)##NM_001841|CNR2|1269|cannabinoid receptor 2 (macrophage)##X74328|CNR2|1269|cannabinoid receptor 2 (macrophage)##M29877|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AB074175|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK092914|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095443|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK095455|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK225468|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK301302|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK310143|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK314649|FUCA1|2517|fucosidase, alpha-L- 1, tissue##BC017338|FUCA1|2517|fucosidase, alpha-L- 1, tissue##AK295535|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000147|FUCA1|2517|fucosidase, alpha-L- 1, tissue##NM_000191|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_001166059|HMGCL|3155|3-hydroxymethyl-3-methylglutaryl-CoA lyase##NM_017761|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF151042|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC068475|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AK311305|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC001959|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC085018|PNRC2|55629|proline-rich nuclear receptor coactivator 2##BC078177|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF374386|PNRC2|55629|proline-rich nuclear receptor coactivator 2##AF449427|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150180|SRSF10|10772|serine/arginine-rich splicing factor 10##AY150181|SRSF10|10772|serine/arginine-rich splicing factor 10##AF047448|SRSF10|10772|serine/arginine-rich splicing factor 10##AF067730|SRSF10|10772|serine/arginine-rich splicing factor 10##AY007101|SRSF10|10772|serine/arginine-rich splicing factor 10##BC010074|SRSF10|10772|serine/arginine-rich splicing factor 10##BC005039|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001286|SRSF10|10772|serine/arginine-rich splicing factor 10##AK001656|SRSF10|10772|serine/arginine-rich splicing factor 10##BC071575|SRSF10|10772|serine/arginine-rich splicing factor 10##AF419331|SRSF10|10772|serine/arginine-rich splicing factor 10	0.979704	CTCF.p2:2:0.980
chr1	25358629	25358809	reg1035162.p1	3.716	+	BC013362 AK310945 NM_001031680 AF022726	-67177	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-101933	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-101980	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	200268	-	BC065040 TSC_hg19_v1_chr1_-_25573922	215204	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	215254	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr15	28594957	28595060	reg1042314.p1	3.716	+	AF071172 BC015486 BC142951 BC045544 NM_004667	-27737	-	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	-250575	-	NM_033223 BC029850 BC045709 S82769	-1378461	+	TSC_hg19_v1_chr15_+_29033278 AK302529	438315	+	TSC_hg19_v1_chr15_+_29077475 BC018626	482474	+	NM_001130414 NM_005503 AF047348 BC082986	618841	+	AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2##M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2	0.79594	CTCF.p2:6:0.796
chr15	29381992	29382130	reg1016335.p1	3.716	+	NM_001130414 NM_005503 AF047348 BC082986	-168212	+	TSC_hg19_v1_chr15_+_29077475 BC018626	-304579	+	TSC_hg19_v1_chr15_+_29033278 AK302529	-348738	+	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	179909	-	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	179968	-	NM_015307	480865	-	NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1	0.954951	CTCF.p2:19:0.955
chr17	7297421	7297577	reg1036078.p2	3.716	+	NM_001251902 NM_003985 AK311063 AK225403 AK310684 U43408	-13149	+	BC040900 AY358218 BC107110 NM_198154	-39024	+	TSC_hg19_v1_chr17_+_7255480 AK056227 AY646650	-41957	+	AK124006 AF289602 BC028080 TSC_hg19_v1_chr17_-_7297842 AK098229 AK075188 AK314643 BC093026 AF159442	358	-	BC014989 NM_001201576 NM_020360	661	-	AK290117 TSC_hg19_v1_chr17_-_7307417 AK055822 BC030270 NM_152766	9935	-	NM_001251902|TNK1|8711|tyrosine kinase, non-receptor, 1##NM_003985|TNK1|8711|tyrosine kinase, non-receptor, 1##AK311063|TNK1|8711|tyrosine kinase, non-receptor, 1##AK225403|TNK1|8711|tyrosine kinase, non-receptor, 1##AK310684|TNK1|8711|tyrosine kinase, non-receptor, 1##U43408|TNK1|8711|tyrosine kinase, non-receptor, 1##BC040900|TMEM95|339168|transmembrane protein 95##AY358218|TMEM95|339168|transmembrane protein 95##BC107110|TMEM95|339168|transmembrane protein 95##NM_198154|TMEM95|339168|transmembrane protein 95##AK056227|KCTD11|147040|potassium channel tetramerisation domain containing 11##AY646650|KCTD11|147040|potassium channel tetramerisation domain containing 11##AK124006|PLSCR3|57048|phospholipid scramblase 3##AF289602|PLSCR3|57048|phospholipid scramblase 3##BC028080|PLSCR3|57048|phospholipid scramblase 3##AK098229|PLSCR3|57048|phospholipid scramblase 3##AK075188|PLSCR3|57048|phospholipid scramblase 3##AK314643|PLSCR3|57048|phospholipid scramblase 3##BC093026|PLSCR3|57048|phospholipid scramblase 3##AF159442|PLSCR3|57048|phospholipid scramblase 3##NM_001201576|PLSCR3|57048|phospholipid scramblase 3##NM_020360|PLSCR3|57048|phospholipid scramblase 3##AK290117|C17orf61-PLSCR3|100529211|C17orf61-PLSCR3 readthrough##AK055822|C17orf61-PLSCR3|100529211|C17orf61-PLSCR3 readthrough##BC030270|C17orf61|254863|chromosome 17 open reading frame 61##NM_152766|C17orf61|254863|chromosome 17 open reading frame 61	0.0	
chr20	3544274	3544357	reg1015387.p1	3.716	+	TSC_hg19_v1_chr20_+_3451737 AF106861	-92575	+	TSC_hg19_v1_chr20_+_3451685 AK293010 NM_001207047 NM_139321 NM_139322 AK302730 BC101705	-92646	+	AK310540 TSC_hg19_v1_chr20_-_3388594	-155722	-	AF253318 AJ291673 AJ291674 AJ291675 NM_022139 NM_145762 BC172271 BC172567	99735	-	AY223855 AY223851 AY223850 AK095953 AK126498 AK304037 AF466287 AK123015 AK226148 BC125112 BC125113 AK300429 AY223853 AF466289 AB055891 AY223852 AY223854 NM_025220 NM_153202 AY358314 BC062663	118445	-	AF230073 BC141884 NM_023068	143459	-	AF106861|ATRN|8455|attractin##AK293010|ATRN|8455|attractin##NM_001207047|ATRN|8455|attractin##NM_139321|ATRN|8455|attractin##NM_139322|ATRN|8455|attractin##AK302730|ATRN|8455|attractin##BC101705|ATRN|8455|attractin##AK310540|C20orf194|25943|chromosome 20 open reading frame 194##AF253318|GFRA4|64096|GDNF family receptor alpha 4##AJ291673|GFRA4|64096|GDNF family receptor alpha 4##AJ291674|GFRA4|64096|GDNF family receptor alpha 4##AJ291675|GFRA4|64096|GDNF family receptor alpha 4##NM_022139|GFRA4|64096|GDNF family receptor alpha 4##NM_145762|GFRA4|64096|GDNF family receptor alpha 4##BC172271|GFRA4|64096|GDNF family receptor alpha 4##BC172567|GFRA4|64096|GDNF family receptor alpha 4##AY223855|ADAM33|80332|ADAM metallopeptidase domain 33##AY223851|ADAM33|80332|ADAM metallopeptidase domain 33##AY223850|ADAM33|80332|ADAM metallopeptidase domain 33##AK095953|ADAM33|80332|ADAM metallopeptidase domain 33##AK126498|ADAM33|80332|ADAM metallopeptidase domain 33##AK304037|ADAM33|80332|ADAM metallopeptidase domain 33##AF466287|ADAM33|80332|ADAM metallopeptidase domain 33##AK123015|ADAM33|80332|ADAM metallopeptidase domain 33##AK226148|ADAM33|80332|ADAM metallopeptidase domain 33##BC125112|ADAM33|80332|ADAM metallopeptidase domain 33##BC125113|ADAM33|80332|ADAM metallopeptidase domain 33##AK300429|ADAM33|80332|ADAM metallopeptidase domain 33##AY223853|ADAM33|80332|ADAM metallopeptidase domain 33##AF466289|ADAM33|80332|ADAM metallopeptidase domain 33##AB055891|ADAM33|80332|ADAM metallopeptidase domain 33##AY223852|ADAM33|80332|ADAM metallopeptidase domain 33##AY223854|ADAM33|80332|ADAM metallopeptidase domain 33##NM_025220|ADAM33|80332|ADAM metallopeptidase domain 33##NM_153202|ADAM33|80332|ADAM metallopeptidase domain 33##AY358314|ADAM33|80332|ADAM metallopeptidase domain 33##BC062663|ADAM33|80332|ADAM metallopeptidase domain 33##AF230073|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##BC141884|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin##NM_023068|SIGLEC1|6614|sialic acid binding Ig-like lectin 1, sialoadhesin	0.996996	
chr21	47746085	47746210	reg1040109.p2	3.716	+	TSC_hg19_v1_chr21_+_47744613 AB007862	-1489	+	TSC_hg19_v1_chr21_+_47744054 NM_006031 AK024009 BC035913 U52962 AF515282	-2060	+	BC067876 TSC_hg19_v1_chr21_-_47743788 BC098408 BC044223 BC121007 BC121008 AK056387 NM_058180 BC026042	-2377	-	TSC_hg19_v1_chr21_-_47878602 AK127572	132454	-	TSC_hg19_v1_chr21_+_47878854 AK303351 NM_001146114 NM_001146115 NM_001146116 NM_015151 NM_206889 NM_206890 NM_206891 BC038443 BC033718 AF490768	132715	+	AK056738 TSC_hg19_v1_chr21_+_47878972 AB273729	132849	+	AB007862|PCNT|5116|pericentrin##NM_006031|PCNT|5116|pericentrin##AK024009|PCNT|5116|pericentrin##BC035913|PCNT|5116|pericentrin##U52962|PCNT|5116|pericentrin##AF515282|PCNT|5116|pericentrin##BC098408|C21orf58|54058|chromosome 21 open reading frame 58##BC044223|C21orf58|54058|chromosome 21 open reading frame 58##BC121007|C21orf58|54058|chromosome 21 open reading frame 58##BC121008|C21orf58|54058|chromosome 21 open reading frame 58##AK056387|C21orf58|54058|chromosome 21 open reading frame 58##NM_058180|C21orf58|54058|chromosome 21 open reading frame 58##BC026042|C21orf58|54058|chromosome 21 open reading frame 58##AK303351|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146114|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146115|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146116|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_015151|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206889|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206890|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206891|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##BC038443|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##BC033718|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AF490768|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AK056738|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AB273729|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)	0.655476	CTCF.p2:8:0.655
chr2	64602788	64602854	reg1040757.p1	3.716	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-231297	-	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	-356316	-	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	-356559	-	TSC_hg19_v1_chr2_+_64681295 NM_014181	78479	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	78827	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	148663	+	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin	0.0	
chr4	106515283	106515349	reg1040715.p1	3.716	+	AK000191 NM_001242729 NM_017700 BC105695	-41534	+	AM393754 AM393796 TSC_hg19_v1_chr4_-_106395220 AK294097 AL136655 AF161473 BC039462 BC008246 BC035569 BC012903 BC022803 AK289607 CU691190 AM393483 EU831414 EU831507 BC001065 BC021071 AB528841 AK297096 AK299125 AK299501 BC057219 AK000466 AB026722 AF217187 NM_006903 NM_176866 NM_176867 NM_176869	-120126	-	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	-447272	+	TSC_hg19_v1_chr4_-_106629819 BC014442 AK314939 NM_001142471 NM_020395	114525	-	TSC_hg19_v1_chr4_+_106629965 AK303547 BX648355 NM_024751 AK023335 AK225563	114657	+	AK292355 BC032942 NM_001031720	116651	+	AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_001242729|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##AM393754|PPA2|27068|pyrophosphatase (inorganic) 2##AM393796|PPA2|27068|pyrophosphatase (inorganic) 2##AK294097|PPA2|27068|pyrophosphatase (inorganic) 2##AL136655|PPA2|27068|pyrophosphatase (inorganic) 2##AF161473|PPA2|27068|pyrophosphatase (inorganic) 2##BC039462|PPA2|27068|pyrophosphatase (inorganic) 2##BC008246|PPA2|27068|pyrophosphatase (inorganic) 2##BC035569|PPA2|27068|pyrophosphatase (inorganic) 2##BC012903|PPA2|27068|pyrophosphatase (inorganic) 2##BC022803|PPA2|27068|pyrophosphatase (inorganic) 2##AK289607|PPA2|27068|pyrophosphatase (inorganic) 2##AM393483|PPA2|27068|pyrophosphatase (inorganic) 2##EU831414|PPA2|27068|pyrophosphatase (inorganic) 2##EU831507|PPA2|27068|pyrophosphatase (inorganic) 2##AK299125|PPA2|27068|pyrophosphatase (inorganic) 2##BC057219|PPA2|27068|pyrophosphatase (inorganic) 2##AK000466|PPA2|27068|pyrophosphatase (inorganic) 2##AB026722|PPA2|27068|pyrophosphatase (inorganic) 2##AF217187|PPA2|27068|pyrophosphatase (inorganic) 2##NM_006903|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176866|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176867|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176869|PPA2|27068|pyrophosphatase (inorganic) 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2##BC014442|INTS12|57117|integrator complex subunit 12##AK314939|INTS12|57117|integrator complex subunit 12##NM_001142471|INTS12|57117|integrator complex subunit 12##NM_020395|INTS12|57117|integrator complex subunit 12##AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	0.0	
chr4	24978347	24978443	reg1035066.p1	3.716	+	AK125353 BC057761 BC067735 NM_001130726 TSC_hg19_v1_chr4_-_24914655	-63814	-	TSC_hg19_v1_chr4_+_24797207 BC014418 J02947	-181177	+	NM_003102 TSC_hg19_v1_chr4_+_24797099 AK313935	-181288	+	AK302905 AL834257 NM_173463	3402	-	AB067503 AF467955 AJ487516 AJ487958 BC101759 BC101761 NM_018176 TSC_hg19_v1_chr4_-_25032569	54042	-	AF146396 AJ277541 BC117202 BC126213 TSC_hg19_v1_chr4_-_25162072 AJ238617 EU832146 EU832239 BC023539 BX648976 BC012188 AK292476 NM_016955	183660	-	AK125353|CCDC149|91050|coiled-coil domain containing 149##BC057761|CCDC149|91050|coiled-coil domain containing 149##BC067735|CCDC149|91050|coiled-coil domain containing 149##NM_001130726|CCDC149|91050|coiled-coil domain containing 149##BC014418|SOD3|6649|superoxide dismutase 3, extracellular##J02947|SOD3|6649|superoxide dismutase 3, extracellular##NM_003102|SOD3|6649|superoxide dismutase 3, extracellular##AK313935|SOD3|6649|superoxide dismutase 3, extracellular##AK302905|CCDC149|91050|coiled-coil domain containing 149##AL834257|CCDC149|91050|coiled-coil domain containing 149##NM_173463|CCDC149|91050|coiled-coil domain containing 149##AB067503|LGI2|55203|leucine-rich repeat LGI family, member 2##AF467955|LGI2|55203|leucine-rich repeat LGI family, member 2##AJ487516|LGI2|55203|leucine-rich repeat LGI family, member 2##AJ487958|LGI2|55203|leucine-rich repeat LGI family, member 2##BC101759|LGI2|55203|leucine-rich repeat LGI family, member 2##BC101761|LGI2|55203|leucine-rich repeat LGI family, member 2##NM_018176|LGI2|55203|leucine-rich repeat LGI family, member 2##AF146396|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ277541|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC117202|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC126213|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AJ238617|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832146|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##EU832239|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC023539|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BX648976|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##BC012188|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##AK292476|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase##NM_016955|SEPSECS|51091|Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase	0.488713	CTCF.p2:-22:0.489
chr4	79535151	79535285	reg1034289.p1	3.716	+	TSC_hg19_v1_chr4_+_79472911 BC000871 AK313945	-62310	+	NM_005139 TSC_hg19_v1_chr4_+_79472790	-62448	+	BC006366 TSC_hg19_v1_chr4_-_79103287	-431933	-	TSC_hg19_v1_chr4_+_79697501 AL137661	162265	+	NM_017593 NM_198892 TSC_hg19_v1_chr4_+_79697532	162318	+	TSC_hg19_v1_chr4_+_79697552 AK292147 BC036021 DQ890994	162405	+	BC000871|ANXA3|306|annexin A3##AK313945|ANXA3|306|annexin A3##NM_005139|ANXA3|306|annexin A3##AL137661|BMP2K|55589|BMP2 inducible kinase##NM_017593|BMP2K|55589|BMP2 inducible kinase##NM_198892|BMP2K|55589|BMP2 inducible kinase##AK292147|BMP2K|55589|BMP2 inducible kinase##BC036021|BMP2K|55589|BMP2 inducible kinase##DQ890994|BMP2K|55589|BMP2 inducible kinase	0.0	
chr7	26438804	26438961	reg1035015.p1	3.716	+	TSC_hg19_v1_chr7_+_26438248 AK056484	-620	+	AK309162 NM_001199838	-34938	+	NM_001199837 AK307905	-38354	+	AK093321 AX748054 NM_001145531	238607	+	AF072166 AJ004886 AB528968 DQ892896 DQ896144 AB014486 TSC_hg19_v1_chr7_-_26904210 BC002893 AK222885 AK313209 BC036044 AF051323 NM_003930	465311	-	S79869 S79871 S79910 U37431 AB464569 CU689416 DQ890884 DQ894038 U10421 AK308067 BC032547 AK313514 NM_005522 NM_153620	696692	-	AK056484|LOC441204|441204|uncharacterized LOC441204##AK309162|SNX10|29887|sorting nexin 10##NM_001199838|SNX10|29887|sorting nexin 10##NM_001199837|SNX10|29887|sorting nexin 10##AK307905|SNX10|29887|sorting nexin 10##AK093321|C7orf71|285941|chromosome 7 open reading frame 71##NM_001145531|C7orf71|285941|chromosome 7 open reading frame 71##AF072166|SKAP2|8935|src kinase associated phosphoprotein 2##AJ004886|SKAP2|8935|src kinase associated phosphoprotein 2##DQ892896|SKAP2|8935|src kinase associated phosphoprotein 2##DQ896144|SKAP2|8935|src kinase associated phosphoprotein 2##AB014486|SKAP2|8935|src kinase associated phosphoprotein 2##BC002893|SKAP2|8935|src kinase associated phosphoprotein 2##AK222885|SKAP2|8935|src kinase associated phosphoprotein 2##AK313209|SKAP2|8935|src kinase associated phosphoprotein 2##BC036044|SKAP2|8935|src kinase associated phosphoprotein 2##AF051323|SKAP2|8935|src kinase associated phosphoprotein 2##NM_003930|SKAP2|8935|src kinase associated phosphoprotein 2##S79869|HOXA1|3198|homeobox A1##S79871|HOXA1|3198|homeobox A1##S79910|HOXA1|3198|homeobox A1##U37431|HOXA1|3198|homeobox A1##DQ890884|HOXA1|3198|homeobox A1##DQ894038|HOXA1|3198|homeobox A1##U10421|HOXA1|3198|homeobox A1##AK308067|HOXA1|3198|homeobox A1##BC032547|HOXA1|3198|homeobox A1##AK313514|HOXA1|3198|homeobox A1##NM_005522|HOXA1|3198|homeobox A1##NM_153620|HOXA1|3198|homeobox A1	0.0	
chr7	63641485	63641593	reg1034475.p2	3.716	+	NM_001159522	-135719	+	AK131575 NM_001159279	-6131657	+	AF277624 NM_033273	-6433969	-	NM_001159524	26041	+	BC033523 NM_153363	47312	+	NM_001170905	131646	+	NM_001159522|ZNF727|442319|zinc finger protein 727##AK131575|ZNF716|441234|zinc finger protein 716##NM_001159279|ZNF716|441234|zinc finger protein 716##AF277624|ZNF479|90827|zinc finger protein 479##NM_033273|ZNF479|90827|zinc finger protein 479##NM_001159524|ZNF735|730291|zinc finger protein 735##BC033523|ZNF679|168417|zinc finger protein 679##NM_153363|ZNF679|168417|zinc finger protein 679##NM_001170905|ZNF736|728927|zinc finger protein 736	0.391388	CTCF.p2:-5:0.391
chr7	72680812	72680942	reg1031906.p1	3.716	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	-111846	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-255635	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-284003	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	41947	-	AK057366 AY081948 AY081949 NM_178125	61207	-	NM_001135211 AK302121 NM_003602 AK310255 BC036817 AF038847 CU691432 EU176233 EU176537 GQ129339 GQ129340	61415	+	BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50##NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa##AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa##NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa##AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa##BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa##AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa	0.0	
chr8	61145944	61146052	reg1033389.p1	3.716	+	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	-1114326	-	NM_003580 TSC_hg19_v1_chr8_-_59572413	-1573587	-	BC041124 TSC_hg19_v1_chr8_-_59572386	-1573612	-	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	47923	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	283442	+	AK297576 TSC_hg19_v1_chr8_+_61429494	283496	+	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC041124|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family##AK297576|RAB2A|5862|RAB2A, member RAS oncogene family	0.997343	CTCF.p2:-25:0.997
chr10	95301914	95301996	reg1035404.p2	3.715	+	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	-45567	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	-59907	-	AK075374 NM_000783 AF005418	-468299	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	24554	+	X00129 TSC_hg19_v1_chr10_-_95360993 BC020633 NM_006744	59023	-	NM_006204 U31973 BC111377	70452	+	NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1##X00129|RBP4|5950|retinol binding protein 4, plasma##BC020633|RBP4|5950|retinol binding protein 4, plasma##NM_006744|RBP4|5950|retinol binding protein 4, plasma##NM_006204|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##U31973|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime##BC111377|PDE6C|5146|phosphodiesterase 6C, cGMP-specific, cone, alpha prime	0.0	
chr1	118790401	118790501	reg1031073.p1	3.715	+	AB527095 AK091816 AX747199 AY555274 BX648110 NM_206996	-62638	-	TSC_hg19_v1_chr1_+_118472364 NM_006784 AK292438 AF083217 BC128385 BC128454 BC148244	-318073	+	BC058836 TSC_hg19_v1_chr1_+_118472357	-318098	+	AK127536 NM_152380	741727	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	892575	+	TSC_hg19_v1_chr1_-_119683274 BC021722 CU692202 BC039889 AK223197 AJ242739 AK296799 BC044575 AK313740 AK300295 NM_015836 NM_201263	892818	-	AK091816|SPAG17|200162|sperm associated antigen 17##AY555274|SPAG17|200162|sperm associated antigen 17##BX648110|SPAG17|200162|sperm associated antigen 17##NM_206996|SPAG17|200162|sperm associated antigen 17##NM_006784|WDR3|10885|WD repeat domain 3##AK292438|WDR3|10885|WD repeat domain 3##AF083217|WDR3|10885|WD repeat domain 3##BC058836|WDR3|10885|WD repeat domain 3##AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15##BC021722|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC039889|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK223197|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AJ242739|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK296799|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC044575|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK313740|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK300295|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_015836|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_201263|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial	0.16897	
chr15	76221131	76221238	reg1031730.p2	3.715	+	TSC_hg19_v1_chr15_+_76196276 BC020204 NM_012170 NM_147188 AK307084 AK024048 BC041691 AK223500 BC039024 AK294311 BC008762 BC032540 CU692024 AY005144	-24935	+	AK296234 NM_001145335 TSC_hg19_v1_chr15_+_76136384	-84796	+	TSC_hg19_v1_chr15_+_76135995 CU676032 AK294199	-85146	+	CR749519 AK311507 BC017568 NM_138573	83589	-	AK311204 TSC_hg19_v1_chr15_-_76352131	130918	-	TSC_hg19_v1_chr15_+_76352281 AK095509 NM_152335	131105	+	BC020204|FBXO22|26263|F-box protein 22##NM_012170|FBXO22|26263|F-box protein 22##NM_147188|FBXO22|26263|F-box protein 22##AK307084|FBXO22|26263|F-box protein 22##AK024048|FBXO22|26263|F-box protein 22##BC041691|FBXO22|26263|F-box protein 22##AK223500|FBXO22|26263|F-box protein 22##BC039024|FBXO22|26263|F-box protein 22##AK294311|FBXO22|26263|F-box protein 22##BC032540|FBXO22|26263|F-box protein 22##AY005144|FBXO22|26263|F-box protein 22##AK296234|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##NM_001145335|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##AK294199|UBE2Q2|92912|ubiquitin-conjugating enzyme E2Q family member 2##CR749519|NRG4|145957|neuregulin 4##AK311507|NRG4|145957|neuregulin 4##BC017568|NRG4|145957|neuregulin 4##NM_138573|NRG4|145957|neuregulin 4##AK311204|NRG4|145957|neuregulin 4##AK095509|C15orf27|123591|chromosome 15 open reading frame 27##NM_152335|C15orf27|123591|chromosome 15 open reading frame 27	0.16667	
chr16	28944309	28944383	reg1036715.p1	3.715	+	NM_001178098 NM_001770 BC006338 AK301363 AK313577 BC052294 M21097 X13312 AK307295 M28170 DQ893016 DQ896261 AK130657 AK301167 AK304456	-1044	+	AY129017 TSC_hg19_v1_chr16_-_28936536 AK295229 BC046118 AK026935 NM_024816 BC058900	-7838	-	TSC_hg19_v1_chr16_+_28891234 AK128456	-53043	+	BC068007 BC101741 BC112182 TSC_hg19_v1_chr16_+_28962327 AF458593 NM_032815 AK074761 AK304172	17892	+	TSC_hg19_v1_chr16_+_28986106 BC038961 NM_001142448 NM_001142449 NM_001142450 NM_001142451 NM_032038 AK095677 AK289787 BC065235 AF370423 BC047741 AB209402 AL390215 AF212371 BC008325 AM392778 AM393748 AB528362 CU678917 BC006156	41908	+	BC011563 NM_001014989	51800	+	NM_001178098|CD19|930|CD19 molecule##NM_001770|CD19|930|CD19 molecule##BC006338|CD19|930|CD19 molecule##AK301363|CD19|930|CD19 molecule##AK313577|CD19|930|CD19 molecule##BC052294|CD19|930|CD19 molecule##M21097|CD19|930|CD19 molecule##X13312|CD19|930|CD19 molecule##AK307295|CD19|930|CD19 molecule##DQ893016|CD19|930|CD19 molecule##DQ896261|CD19|930|CD19 molecule##AK130657|CD19|930|CD19 molecule##AK301167|CD19|930|CD19 molecule##AK304456|CD19|930|CD19 molecule##AK295229|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC046118|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##AK026935|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##NM_024816|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC058900|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##AK128456|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC068007|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC101741|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC112182|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AF458593|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##NM_032815|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK074761|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK304172|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC038961|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142448|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142449|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142450|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142451|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_032038|SPNS1|83985|spinster homolog 1 (Drosophila)##AK095677|SPNS1|83985|spinster homolog 1 (Drosophila)##AK289787|SPNS1|83985|spinster homolog 1 (Drosophila)##BC065235|SPNS1|83985|spinster homolog 1 (Drosophila)##AF370423|SPNS1|83985|spinster homolog 1 (Drosophila)##BC047741|SPNS1|83985|spinster homolog 1 (Drosophila)##AL390215|SPNS1|83985|spinster homolog 1 (Drosophila)##AF212371|SPNS1|83985|spinster homolog 1 (Drosophila)##BC008325|SPNS1|83985|spinster homolog 1 (Drosophila)##AM392778|SPIN1|10927|spindlin 1##AM393748|SPIN1|10927|spindlin 1##BC006156|SPNS1|83985|spinster homolog 1 (Drosophila)##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells	0.0	
chr19	3155104	3155186	reg1028695.p1	3.715	+	TSC_hg19_v1_chr19_+_3136030 GU727645 NM_002068 M63904 AK300481 AK291329 BC013585 GU727637	-19001	+	TSC_hg19_v1_chr19_+_3122573 BC051315 CU674752	-32540	+	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	-32752	+	NM_003775 TSC_hg19_v1_chr19_+_3178766 BC014970 AJ000479	23607	+	TSC_hg19_v1_chr19_+_3185896 NM_020170	30733	+	AK172848 TSC_hg19_v1_chr19_+_3185938 AK314044 BC010064 BC019091 BC025926	30799	+	GU727645|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##NM_002068|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##M63904|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK300481|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##AK291329|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC013585|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##GU727637|GNA15|2769|guanine nucleotide binding protein (G protein), alpha 15 (Gq class)##BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##NM_003775|S1PR4|8698|sphingosine-1-phosphate receptor 4##BC014970|S1PR4|8698|sphingosine-1-phosphate receptor 4##AJ000479|S1PR4|8698|sphingosine-1-phosphate receptor 4##NM_020170|NCLN|56926|nicalin##AK172848|NCLN|56926|nicalin##AK314044|NCLN|56926|nicalin##BC010064|NCLN|56926|nicalin##BC019091|NCLN|56926|nicalin##BC025926|NCLN|56926|nicalin	0.0	
chr22	25961409	25961515	reg1029376.p2	3.715	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-516	+	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	-663	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	-117386	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	176658	+	TSC_hg19_v1_chr22_+_26138168 AY077700	176722	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	603975	+	BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##AY077700|MYO18B|84700|myosin XVIIIB##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.0	
chr3	141030890	141031055	reg1004548.p2	3.715	+	TSC_hg19_v1_chr3_+_140950671 AK297790 NM_001037172 NM_152282 AK074331 BC035834 BX647621 AY358460	-80286	+	AF403029 BC008324 NM_080862 AK056367	-260215	+	TSC_hg19_v1_chr3_+_140770412 BC051354	-260494	+	BC015444 NM_001080412 TSC_hg19_v1_chr3_+_141043057	12084	+	TSC_hg19_v1_chr3_+_141087345 AK311501	56385	+	AK311479 TSC_hg19_v1_chr3_+_141105293	74316	+	AK297790|ACPL2|92370|acid phosphatase-like 2##NM_001037172|ACPL2|92370|acid phosphatase-like 2##NM_152282|ACPL2|92370|acid phosphatase-like 2##AK074331|ACPL2|92370|acid phosphatase-like 2##BC035834|ACPL2|92370|acid phosphatase-like 2##BX647621|ACPL2|92370|acid phosphatase-like 2##AY358460|ACPL2|92370|acid phosphatase-like 2##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC015444|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001080412|ZBTB38|253461|zinc finger and BTB domain containing 38##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38	0.0	
chr3	56076515	56076605	reg1040677.p1	3.715	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-554942	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-555228	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-561152	-	BC111550 BC112391 AB002376 NM_015576	425817	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	514642	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	514686	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.0	
chr6	124287173	124287285	reg1028725.p1	3.715	+	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	-162025	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	-329140	-	BC101377 BC101376 NM_001010852	-969649	+	AK093417 AX748113 BC026087 NM_152553	1017282	+	TSC_hg19_v1_chr6_+_125474909 NM_001003396 NM_001003397 NM_003287 AK291866 U44427 BC002375 AK291872 AF208012 AK291887	1187710	+	AK124817 NM_001003395	1188147	+	NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217##NM_001003396|TPD52L1|7164|tumor protein D52-like 1##NM_001003397|TPD52L1|7164|tumor protein D52-like 1##NM_003287|TPD52L1|7164|tumor protein D52-like 1##AK291866|TPD52L1|7164|tumor protein D52-like 1##U44427|TPD52L1|7164|tumor protein D52-like 1##BC002375|TPD52L1|7164|tumor protein D52-like 1##AK291872|TPD52L1|7164|tumor protein D52-like 1##AF208012|TPD52L1|7164|tumor protein D52-like 1##AK291887|TPD52L1|7164|tumor protein D52-like 1##AK124817|TPD52L1|7164|tumor protein D52-like 1##NM_001003395|TPD52L1|7164|tumor protein D52-like 1	0.443	CTCF.p2:-24:0.443
chr8	129089082	129089186	reg1035682.p1	3.715	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-282351	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-340644	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-340809	+	AB042405 NM_031415	1709999	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1862781	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1862872	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.134123	
chr8	41386792	41386972	reg1004069.p2	3.715	+	TSC_hg19_v1_chr8_+_41386779 AK095334 AK313373	-110	+	NM_032336 AK299207 BC027454 TSC_hg19_v1_chr8_+_41386745 BC005995	-145	+	AF068291 TSC_hg19_v1_chr8_+_41348140 BC012032 NM_001002296	-38733	+	TSC_hg19_v1_chr8_+_41435710 NM_178819 AF406612	48812	+	AB587362 AK057898 NM_152568	117993	-	AK223578 AK129864 BC007930 BC030957 BC014467 NM_001142445 NM_020478 NM_020480	135881	-	AK095334|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK313373|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##NM_032336|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AK299207|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC027454|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##BC005995|GINS4|84296|GINS complex subunit 4 (Sld5 homolog)##AF068291|GOLGA7|51125|golgin A7##BC012032|GOLGA7|51125|golgin A7##NM_001002296|GOLGA7|51125|golgin A7##NM_178819|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AF406612|AGPAT6|137964|1-acylglycerol-3-phosphate O-acyltransferase 6 (lysophosphatidic acid acyltransferase, zeta)##AK057898|NKX6-3|157848|NK6 homeobox 3##NM_152568|NKX6-3|157848|NK6 homeobox 3##AK223578|ANK1|286|ankyrin 1, erythrocytic##AK129864|ANK1|286|ankyrin 1, erythrocytic##BC007930|ANK1|286|ankyrin 1, erythrocytic##BC030957|ANK1|286|ankyrin 1, erythrocytic##BC014467|ANK1|286|ankyrin 1, erythrocytic##NM_001142445|ANK1|286|ankyrin 1, erythrocytic##NM_020478|ANK1|286|ankyrin 1, erythrocytic##NM_020480|ANK1|286|ankyrin 1, erythrocytic	0.0	
chr9	114981361	114981513	reg1036819.p2	3.715	+	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	-43917	-	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-321970	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-322323	+	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	113850	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	114412	-	TSC_hg19_v1_chr9_-_115095957 NM_001163788 NM_001163790 NM_001244896 NM_001244897 NM_005156	114536	-	AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001163788|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001163790|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244896|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244897|PTBP3|9991|polypyrimidine tract binding protein 3##NM_005156|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chr1	207103040	207103136	reg1043592.p1	3.714	+	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	-7801	-	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	-32288	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	-63913	+	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	16673	-	AK298394 NM_001122979 NM_001170631 NM_032029	40868	-	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	102960	-	BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116	0.0	
chr1	224401610	224401790	reg1038654.p1	3.714	+	TSC_hg19_v1_chr1_+_224370941 AK308232 AF466375 AY423730 AF002668 CU674476	-30713	+	TSC_hg19_v1_chr1_+_224370925 BC000961 NM_003676	-30778	+	NM_001136115 NM_015176 TSC_hg19_v1_chr1_+_224301812 AK001628 AK307892 BC031576 AK303381 CU689186	-99890	+	TSC_hg19_v1_chr1_-_224517875 BC012105 AK298244 AK297396 AK298826 AK293923 AK297070 BC005897 U78772 U68140 NM_001243146 NM_001243147 NM_002533 NM_206840	116152	-	TSC_hg19_v1_chr1_+_224544588 AL136930 AK289973 AK312064 BC039037	142869	+	TSC_hg19_v1_chr1_+_224544594 AF161512 NM_014184	142892	+	AK308232|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF466375|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AY423730|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF002668|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##BC000961|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_003676|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_001136115|FBXO28|23219|F-box protein 28##NM_015176|FBXO28|23219|F-box protein 28##AK001628|FBXO28|23219|F-box protein 28##AK307892|FBXO28|23219|F-box protein 28##BC031576|FBXO28|23219|F-box protein 28##AK303381|FBXO28|23219|F-box protein 28##BC012105|NVL|4931|nuclear VCP-like##AK298244|NVL|4931|nuclear VCP-like##AK297396|NVL|4931|nuclear VCP-like##AK298826|NVL|4931|nuclear VCP-like##AK293923|NVL|4931|nuclear VCP-like##AK297070|NVL|4931|nuclear VCP-like##BC005897|NVL|4931|nuclear VCP-like##U78772|NVL|4931|nuclear VCP-like##U68140|NVL|4931|nuclear VCP-like##NM_001243146|NVL|4931|nuclear VCP-like##NM_001243147|NVL|4931|nuclear VCP-like##NM_002533|NVL|4931|nuclear VCP-like##NM_206840|NVL|4931|nuclear VCP-like##AL136930|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK289973|CNIH4|29097|cornichon homolog 4 (Drosophila)##AK312064|CNIH4|29097|cornichon homolog 4 (Drosophila)##BC039037|CNIH4|29097|cornichon homolog 4 (Drosophila)##AF161512|CNIH4|29097|cornichon homolog 4 (Drosophila)##NM_014184|CNIH4|29097|cornichon homolog 4 (Drosophila)	0.0	
chr12	94495964	94496092	reg1011346.p2	3.714	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-424845	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-530427	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-531208	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	46476	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	357503	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	357614	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.0	
chr13	25746396	25746462	reg1036219.p2	3.714	+	AK055049 BC041392 TSC_hg19_v1_chr13_-_25746427	-64	-	TSC_hg19_v1_chr13_-_25745778 NM_152704 NM_199138	-612	-	AK098343 BC032653 TSC_hg19_v1_chr13_-_25745701	-769	-	AB384771 AF406619 AM392681 AM392837 CU691804 TSC_hg19_v1_chr13_-_25861510	115019	-	AK314587 TSC_hg19_v1_chr13_-_25861584 BC040012	115146	-	TSC_hg19_v1_chr13_-_25861621 AL832017 AK093237 AX748005 NM_004685	115226	-	AK055049|FAM123A|219287|family with sequence similarity 123A##BC041392|FAM123A|219287|family with sequence similarity 123A##NM_152704|FAM123A|219287|family with sequence similarity 123A##NM_199138|FAM123A|219287|family with sequence similarity 123A##AK098343|FAM123A|219287|family with sequence similarity 123A##BC032653|FAM123A|219287|family with sequence similarity 123A##AF406619|MTMR6|9107|myotubularin related protein 6##AM392681|MTMR6|9107|myotubularin related protein 6##AM392837|MTMR6|9107|myotubularin related protein 6##AK314587|MTMR6|9107|myotubularin related protein 6##BC040012|MTMR6|9107|myotubularin related protein 6##AL832017|MTMR6|9107|myotubularin related protein 6##AK093237|MTMR6|9107|myotubularin related protein 6##NM_004685|MTMR6|9107|myotubularin related protein 6	0.0	
chr16	81832320	81832456	reg1031492.p1	3.714	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-19458	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-19486	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	-19491	+	BC019670 AK315652 AK026740 NM_145168	212680	-	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	236473	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	236544	+	BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.0	
chr17	16850985	16851098	reg1030423.p2	3.714	+	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-257437	+	AK131401 NM_020787	-293880	-	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-378545	-	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	24363	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	94923	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	258572	-	EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6	0.0	
chr2	152266375	152266556	reg1034469.p2	3.714	+	TSC_hg19_v1_chr2_+_152266419 AY727910 AY727913 NM_001177663 NM_018151 AY727911 NM_001177664 AK299572 AK299291 BX648324 AY585745 CR933663	-35	+	NM_007115 M31165 BC030205 AB590644 AJ419936 AJ421518 CU688838 AF086484	-52286	+	U32849 AK124323 TSC_hg19_v1_chr2_-_152146429 AK291548 AK298754 NM_004688	-120062	-	AY727912 NM_001177665 TSC_hg19_v1_chr2_+_152266674	173	+	TSC_hg19_v1_chr2_-_152590990 AK096903 AK307607 BC029384 BC012533 BC056251 BC105590 NM_001164507 NM_001164508 NM_004543	324526	-	AB528315 AF493891 BT009829 DQ891193 DQ894376 TSC_hg19_v1_chr2_-_152684707 AF100740	418256	-	AY727910|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727913|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_018151|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY727911|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177664|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299572|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK299291|RIF1|55183|RAP1 interacting factor homolog (yeast)##BX648324|RIF1|55183|RAP1 interacting factor homolog (yeast)##AY585745|RIF1|55183|RAP1 interacting factor homolog (yeast)##CR933663|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_007115|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##M31165|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##BC030205|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AJ419936|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AJ421518|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##AF086484|TNFAIP6|7130|tumor necrosis factor, alpha-induced protein 6##U32849|NMI|9111|N-myc (and STAT) interactor##AK124323|NMI|9111|N-myc (and STAT) interactor##AK291548|NMI|9111|N-myc (and STAT) interactor##AK298754|NMI|9111|N-myc (and STAT) interactor##NM_004688|NMI|9111|N-myc (and STAT) interactor##AY727912|RIF1|55183|RAP1 interacting factor homolog (yeast)##NM_001177665|RIF1|55183|RAP1 interacting factor homolog (yeast)##AK096903|NEB|4703|nebulin##AK307607|NEB|4703|nebulin##BC029384|NEB|4703|nebulin##BC012533|NEB|4703|nebulin##BC056251|NEB|4703|nebulin##BC105590|NEB|4703|nebulin##NM_001164507|NEB|4703|nebulin##NM_001164508|NEB|4703|nebulin##NM_004543|NEB|4703|nebulin##AF493891|ARL5A|26225|ADP-ribosylation factor-like 5A##BT009829|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ891193|ARL5A|26225|ADP-ribosylation factor-like 5A##DQ894376|ARL5A|26225|ADP-ribosylation factor-like 5A##AF100740|ARL5A|26225|ADP-ribosylation factor-like 5A	0.0	
chr2	225222409	225222586	reg1002629.p2	3.714	+	TSC_hg19_v1_chr2_-_224904004 BC015663 AK225823 AK297588 AK312499 NM_001136528 NM_006216	-318327	-	AK295564 NM_001136530	-319157	-	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	-355869	-	BC025754 NM_001122779 NM_024785 AK026399	44233	-	AF052147 BC031844 TSC_hg19_v1_chr2_-_225370764	148231	-	U58089 TSC_hg19_v1_chr2_-_225378353	155839	-	BC015663|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK225823|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK297588|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK312499|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136528|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_006216|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##BC025754|FAM124B|79843|family with sequence similarity 124B##NM_001122779|FAM124B|79843|family with sequence similarity 124B##NM_024785|FAM124B|79843|family with sequence similarity 124B##AK026399|FAM124B|79843|family with sequence similarity 124B##AF052147|CUL3|8452|cullin 3##BC031844|CUL3|8452|cullin 3##U58089|CUL3|8452|cullin 3	0.0	
chr22	43329618	43329752	reg1043674.p1	3.714	+	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-76330	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	-76415	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	-76474	-	BC008037 NM_007229	13361	-	AL136845 NM_001184971	26201	-	TSC_hg19_v1_chr22_-_43411136 AF128536	81454	-	NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	0.0	
chr2	3005485	3005594	reg1046404.p1	3.714	+	TSC_hg19_v1_chr2_-_2335085 AK307797	-670455	-	BC137272 BC137273 AF036943 TSC_hg19_v1_chr2_-_2335017 AB029029 BC150281 NM_015025	-670574	-	BC031690 TSC_hg19_v1_chr2_-_1946938	-1058633	-	DQ892693 DQ895936 CU677984 BC002485 TSC_hg19_v1_chr2_-_3381590 AK222652 AK026522 AF019952 NM_003310	376017	-	TSC_hg19_v1_chr2_+_3383492 AK094181 AK098327 NM_016030 BC014164	377966	+	AB463391 CU674724 AF087863 AB158319 BC001467 TSC_hg19_v1_chr2_-_3523303 AK222467 AK225278 AB073609 AK001775	517759	-	AK307797|MYT1L|23040|myelin transcription factor 1-like##BC137272|MYT1L|23040|myelin transcription factor 1-like##BC137273|MYT1L|23040|myelin transcription factor 1-like##AF036943|MYT1L|23040|myelin transcription factor 1-like##AB029029|MYT1L|23040|myelin transcription factor 1-like##BC150281|MYT1L|23040|myelin transcription factor 1-like##NM_015025|MYT1L|23040|myelin transcription factor 1-like##BC031690|MYT1L|23040|myelin transcription factor 1-like##DQ892693|TSSC1|7260|tumor suppressing subtransferable candidate 1##DQ895936|TSSC1|7260|tumor suppressing subtransferable candidate 1##BC002485|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK222652|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK026522|TSSC1|7260|tumor suppressing subtransferable candidate 1##AF019952|TSSC1|7260|tumor suppressing subtransferable candidate 1##NM_003310|TSSC1|7260|tumor suppressing subtransferable candidate 1##AK094181|TTC15|51112|tetratricopeptide repeat domain 15##AK098327|TTC15|51112|tetratricopeptide repeat domain 15##NM_016030|TTC15|51112|tetratricopeptide repeat domain 15##BC014164|TTC15|51112|tetratricopeptide repeat domain 15##AF087863|ADI1|55256|acireductone dioxygenase 1##AB158319|ADI1|55256|acireductone dioxygenase 1##BC001467|ADI1|55256|acireductone dioxygenase 1##AK222467|ADI1|55256|acireductone dioxygenase 1##AK225278|ADI1|55256|acireductone dioxygenase 1##AB073609|ADI1|55256|acireductone dioxygenase 1##AK001775|ADI1|55256|acireductone dioxygenase 1	0.603918	CTCF.p2:0:0.604
chr3	183243424	183243561	reg1036268.p1	3.714	+	TSC_hg19_v1_chr3_+_183165436 AK057000	-78062	+	NM_015078 BC064632 AK124500 AK310962	-97553	-	TSC_hg19_v1_chr3_+_182971608 AK091474 AX747008	-271886	+	AF441792 CU689348 DQ894788 EU176275 TSC_hg19_v1_chr3_-_183273495 AK097125 AK314473 BX648370 BC032348 NM_130446	29960	-	BC142993 TSC_hg19_v1_chr3_+_183353410 AK026326 AY422472 BX648466 BX648812 NM_017644	109908	+	TSC_hg19_v1_chr3_+_183415597 AB033023 BC150273 NM_018023	172130	+	AK057000|LOC100505687|100505687|uncharacterized LOC100505687##NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AF441792|KLHL6|89857|kelch-like 6 (Drosophila)##DQ894788|KLHL6|89857|kelch-like 6 (Drosophila)##EU176275|KLHL6|89857|kelch-like 6 (Drosophila)##AK097125|KLHL6|89857|kelch-like 6 (Drosophila)##AK314473|KLHL6|89857|kelch-like 6 (Drosophila)##BX648370|KLHL6|89857|kelch-like 6 (Drosophila)##BC032348|KLHL6|89857|kelch-like 6 (Drosophila)##NM_130446|KLHL6|89857|kelch-like 6 (Drosophila)##BC142993|KLHL24|54800|kelch-like 24 (Drosophila)##AK026326|KLHL24|54800|kelch-like 24 (Drosophila)##AY422472|KLHL24|54800|kelch-like 24 (Drosophila)##BX648466|KLHL24|54800|kelch-like 24 (Drosophila)##BX648812|KLHL24|54800|kelch-like 24 (Drosophila)##NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)##AB033023|YEATS2|55689|YEATS domain containing 2##BC150273|YEATS2|55689|YEATS domain containing 2##NM_018023|YEATS2|55689|YEATS domain containing 2	0.0	
chr4	185458840	185459020	reg1006411.p4	3.714	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	-63249	-	BC035035 AY358676 AK057370 NM_153343	-319865	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-631019	+	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	111671	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	111903	+	TSC_hg19_v1_chr4_+_185570923 BC064600 AK307317	111999	+	X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111##BC064600|CCDC111|201973|coiled-coil domain containing 111##AK307317|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr7	47978544	47978634	reg1038953.p2	3.714	+	AK024728 NM_025031 BC113679 BC113681 AK092057 AX747337	-143651	+	AK126096 NM_001123065	-283748	+	TSC_hg19_v1_chr7_-_47622186 AB208995	-356403	-	AB061683 NM_138295	9464	-	BT019481 BT019482 CR536552 Y16893 AB463759 BC007013 TSC_hg19_v1_chr7_-_48019149 AK294117 AK290459 AF076844 AF110393	40563	-	TSC_hg19_v1_chr7_-_48019247 NM_004507	40640	-	AK024728|C7orf69|80099|chromosome 7 open reading frame 69##NM_025031|C7orf69|80099|chromosome 7 open reading frame 69##BC113679|C7orf69|80099|chromosome 7 open reading frame 69##BC113681|C7orf69|80099|chromosome 7 open reading frame 69##AK092057|PKD1L1|168507|polycystic kidney disease 1 like 1##AK126096|C7orf65|401335|chromosome 7 open reading frame 65##NM_001123065|C7orf65|401335|chromosome 7 open reading frame 65##AB208995|TNS3|64759|tensin 3##AB061683|PKD1L1|168507|polycystic kidney disease 1 like 1##NM_138295|PKD1L1|168507|polycystic kidney disease 1 like 1##BT019481|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BT019482|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##CR536552|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##Y16893|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##BC007013|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK294117|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AK290459|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF076844|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##AF110393|HUS1|3364|HUS1 checkpoint homolog (S. pombe)##NM_004507|HUS1|3364|HUS1 checkpoint homolog (S. pombe)	0.374377	CTCF.p2:-11:0.374
chr8	128954592	128954715	reg1033827.p1	3.714	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-147870	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-206163	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-206328	+	AB042405 NM_031415	1844480	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1997262	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1997353	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr9	112891036	112891157	reg1027404.p1	3.714	+	NM_001136562 AK300427	-3304	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	-80133	+	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	-80187	+	NM_001012993	79316	-	AF065241 AF276919 CR407665 AF313911 AY004872 AF085844 BC003377 J04026 BC054866 TSC_hg19_v1_chr9_-_113018788 X77584	127656	-	TSC_hg19_v1_chr9_-_113018817 BX647247 D28376 AK289508	127729	-	NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001012993|C9orf152|401546|chromosome 9 open reading frame 152##AF065241|TXN|7295|thioredoxin##AF276919|TXN|7295|thioredoxin##CR407665|TXN|7295|thioredoxin##AF313911|TXN|7295|thioredoxin##AY004872|TXN|7295|thioredoxin##AF085844|TXN|7295|thioredoxin##BC003377|TXN|7295|thioredoxin##J04026|TXN|7295|thioredoxin##BC054866|TXN|7295|thioredoxin##X77584|TXN|7295|thioredoxin##BX647247|TXN|7295|thioredoxin##D28376|TXN|7295|thioredoxin##AK289508|TXN|7295|thioredoxin	0.0	
chr10	71643101	71643247	reg1035265.p1	3.713	+	TSC_hg19_v1_chr10_+_71562275 M59217	-80883	+	AJ293624 TSC_hg19_v1_chr10_+_71561687	-81485	+	NM_001130103 NM_080798 NM_080800 NM_080801 NM_080802 NM_080805 TSC_hg19_v1_chr10_+_71561654 BC139913	-81517	+	NM_018649	169182	+	TSC_hg19_v1_chr10_+_71812601 BC016172 AK022776 AK131057 AF151534 AF336304 AK022475	169423	+	TSC_hg19_v1_chr10_-_71892569 AK027403	249374	-	M59217|COL13A1|1305|collagen, type XIII, alpha 1##AJ293624|COL13A1|1305|collagen, type XIII, alpha 1##NM_001130103|COL13A1|1305|collagen, type XIII, alpha 1##NM_080798|COL13A1|1305|collagen, type XIII, alpha 1##NM_080800|COL13A1|1305|collagen, type XIII, alpha 1##NM_080801|COL13A1|1305|collagen, type XIII, alpha 1##NM_080802|COL13A1|1305|collagen, type XIII, alpha 1##NM_080805|COL13A1|1305|collagen, type XIII, alpha 1##BC139913|COL13A1|1305|collagen, type XIII, alpha 1##NM_018649|H2AFY2|55506|H2A histone family, member Y2##BC016172|H2AFY2|55506|H2A histone family, member Y2##AK022776|H2AFY2|55506|H2A histone family, member Y2##AK131057|H2AFY2|55506|H2A histone family, member Y2##AF151534|H2AFY2|55506|H2A histone family, member Y2##AF336304|H2AFY2|55506|H2A histone family, member Y2##AK022475|H2AFY2|55506|H2A histone family, member Y2##AK027403|AIFM2|84883|apoptosis-inducing factor, mitochondrion-associated, 2	0.036409	
chr11	2419985	2420166	reg1028499.p1	3.713	+	TSC_hg19_v1_chr11_+_2398543 NM_004356 BC093047 M33680	-21528	+	TSC_hg19_v1_chr11_+_2323366 AY039001 AK310116 CU677677 AK298692	-96689	+	TSC_hg19_v1_chr11_+_2323260 AK128812 AK307638 BC016693 NM_139022	-96824	+	TSC_hg19_v1_chr11_+_2421990 BC006091	1921	+	AF125568 NM_005706	3447	+	AJ270996 BC093787 BC093789 BC143351 BC143353 AF177473 NM_014555	24182	-	NM_004356|CD81|975|CD81 molecule##BC093047|CD81|975|CD81 molecule##M33680|CD81|975|CD81 molecule##AY039001|TSPAN32|10077|tetraspanin 32##AK310116|TSPAN32|10077|tetraspanin 32##AK298692|TSPAN32|10077|tetraspanin 32##AK128812|TSPAN32|10077|tetraspanin 32##AK307638|TSPAN32|10077|tetraspanin 32##BC016693|TSPAN32|10077|tetraspanin 32##NM_139022|TSPAN32|10077|tetraspanin 32##BC006091|TSSC4|10078|tumor suppressing subtransferable candidate 4##AF125568|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_005706|TSSC4|10078|tumor suppressing subtransferable candidate 4##AJ270996|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093787|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093789|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143351|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143353|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF177473|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##NM_014555|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5	0.160586	
chr12	94537827	94537900	reg1042553.p1	3.713	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-466680	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-572262	-	TSC_hg19_v1_chr12_+_93964804 AK297662 AK309452	-573043	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	4641	+	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	315668	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	315779	-	NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##AK297662|SOCS2|8835|suppressor of cytokine signaling 2##AK309452|SOCS2|8835|suppressor of cytokine signaling 2##AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41	0.0	
chr14	93799701	93799825	reg1031942.p2	3.713	+	AK125327 NM_020818	-199	+	TSC_hg19_v1_chr14_-_93799376 AK291422 BC141850 BX248762 NM_001002860 NM_018167 BC047071	-359	-	TSC_hg19_v1_chr14_-_93799368 AB040958 AK001510	-398	-	AY161004 NM_182971 BC101125 BC101126	13785	+	AY225516 AY225517 NM_178013	455002	-	NM_001207071 NM_138344 AK093387 AX748092	585485	+	AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)##AK291422|BTBD7|55727|BTB (POZ) domain containing 7##BC141850|BTBD7|55727|BTB (POZ) domain containing 7##BX248762|BTBD7|55727|BTB (POZ) domain containing 7##NM_001002860|BTBD7|55727|BTB (POZ) domain containing 7##NM_018167|BTBD7|55727|BTB (POZ) domain containing 7##BC047071|BTBD7|55727|BTB (POZ) domain containing 7##AB040958|BTBD7|55727|BTB (POZ) domain containing 7##AK001510|BTBD7|55727|BTB (POZ) domain containing 7##AY161004|COX8C|341947|cytochrome c oxidase subunit VIIIC##NM_182971|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101125|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101126|COX8C|341947|cytochrome c oxidase subunit VIIIC##AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A	0.0	
chr14	97264347	97264511	reg1035720.p1	3.713	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-714	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-295645	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-295683	+	AK098639 NM_182560	1913520	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	2473188	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	2473461	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.0	
chr17	49128083	49128192	reg1038713.p2	3.713	+	TSC_hg19_v1_chr17_-_49124138 BC007524 BC059946 AK299553 AK307793 AK295098 AK309214 AK024068 NM_001251971	-3909	-	AK313904 NM_001243877	-182799	-	TSC_hg19_v1_chr17_-_48943716 BC070493 BC098415 NM_001243885 NM_005749	-184441	-	TSC_hg19_v1_chr17_-_49198227 AF327452 BC106048 AK302789 AY850123 AB011088 BC146755 BC153878 AK091921 AX747254 NM_001130527 NM_001130528 NM_003971	70018	-	NM_001018136 TSC_hg19_v1_chr17_+_49230927 AK291105 NM_000269 NM_198175	102774	+	TSC_hg19_v1_chr17_+_49230932 AL360191 AF487339	102795	+	BC007524|SPAG9|9043|sperm associated antigen 9##BC059946|SPAG9|9043|sperm associated antigen 9##AK299553|SPAG9|9043|sperm associated antigen 9##AK307793|SPAG9|9043|sperm associated antigen 9##AK295098|SPAG9|9043|sperm associated antigen 9##AK309214|SPAG9|9043|sperm associated antigen 9##AK024068|SPAG9|9043|sperm associated antigen 9##NM_001251971|SPAG9|9043|sperm associated antigen 9##AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1##BC070493|TOB1|10140|transducer of ERBB2, 1##BC098415|TOB1|10140|transducer of ERBB2, 1##NM_001243885|TOB1|10140|transducer of ERBB2, 1##NM_005749|TOB1|10140|transducer of ERBB2, 1##AF327452|SPAG9|9043|sperm associated antigen 9##AK302789|SPAG9|9043|sperm associated antigen 9##AY850123|SPAG9|9043|sperm associated antigen 9##AB011088|SPAG9|9043|sperm associated antigen 9##BC146755|SPAG9|9043|sperm associated antigen 9##BC153878|SPAG9|9043|sperm associated antigen 9##AK091921|SPAG9|9043|sperm associated antigen 9##NM_001130527|SPAG9|9043|sperm associated antigen 9##NM_001130528|SPAG9|9043|sperm associated antigen 9##NM_003971|SPAG9|9043|sperm associated antigen 9##NM_001018136|NME1-NME2|654364|NME1-NME2 readthrough##AK291105|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_000269|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_198175|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##AL360191|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##AF487339|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in	0.0	
chr17	61483141	61483251	reg1039116.p2	3.713	+	BC144357 TSC_hg19_v1_chr17_+_61271368	-211835	+	NM_025185	-396299	+	AK122947 AK093076 AX747906 BX648705 NM_152598	-597519	-	BC091485 NM_001017917	34994	-	AK095244 NM_001017916 TSC_hg19_v1_chr17_-_61523715 AK301541 AK294403 BC002976 AK303177 AK316606 NM_001915	40440	-	TSC_hg19_v1_chr17_+_61554421 AK296566 AK309514 NM_000789 AK300516 AB208971 J04144	71232	+	BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC091485|CYB561|1534|cytochrome b-561##NM_001017917|CYB561|1534|cytochrome b-561##AK095244|CYB561|1534|cytochrome b-561##NM_001017916|CYB561|1534|cytochrome b-561##AK301541|CYB561|1534|cytochrome b-561##AK294403|CYB561|1534|cytochrome b-561##BC002976|CYB561|1534|cytochrome b-561##AK303177|CYB561|1534|cytochrome b-561##AK316606|CYB561|1534|cytochrome b-561##NM_001915|CYB561|1534|cytochrome b-561##AK296566|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK309514|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##NM_000789|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK300516|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AB208971|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##J04144|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	0.996545	CTCF.p2:2:0.997
chr2	110745548	110745728	reg1008452.p2	3.713	+	BC094740 NM_001205288 NM_033514	-89630	+	NM_005054 U64675	-193673	+	AL136868 NM_001037866 NM_001123363 NM_032260	-195304	+	U17077 AB590150 DQ892870 DQ896118 TSC_hg19_v1_chr2_-_110873397 BC003179	127767	-	TSC_hg19_v1_chr2_-_110873536 AK311353	127927	-	TSC_hg19_v1_chr2_-_110873641 AK056616	128006	-	BC094740|LIMS3-LOC440895|100271835|LIMS3-LOC440895 readthrough##NM_001205288|LIMS3L|100288695|LIM and senescent cell antigen-like domains 3-like##NM_033514|LIMS3|96626|LIM and senescent cell antigen-like domains 3##NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U17077|MALL|7851|mal, T-cell differentiation protein-like##DQ892870|MALL|7851|mal, T-cell differentiation protein-like##DQ896118|MALL|7851|mal, T-cell differentiation protein-like##BC003179|MALL|7851|mal, T-cell differentiation protein-like##AK311353|MALL|7851|mal, T-cell differentiation protein-like##AK056616|MALL|7851|mal, T-cell differentiation protein-like	0.0	
chr2	127507282	127507400	reg1035183.p1	3.713	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-93549	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-93634	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2724477	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	357400	-	BC039307 NM_001001665	456001	-	AK131190 TSC_hg19_v1_chr2_-_127977781	470376	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.03372	
chr2	131582131	131582307	reg1038154.p2	3.713	+	TSC_hg19_v1_chr2_+_131513793 NM_001105194 NM_001105195	-68397	+	AK289525 NM_152698 AK095696 AK291424 BC113445 BC113447 BC143806 NM_001105193	-69104	+	BC105013 BC105041 NM_207364 AY569570 AY280965	-95536	+	AF249745 NM_015320 NM_032995	92004	+	TSC_hg19_v1_chr2_-_131851008 BC066347 BC110642 NM_001009993	268779	-	AK126289 NM_001100623 NM_017958	280200	+	NM_001105194|FAM123C|205147|family with sequence similarity 123C##NM_001105195|FAM123C|205147|family with sequence similarity 123C##AK289525|FAM123C|205147|family with sequence similarity 123C##NM_152698|FAM123C|205147|family with sequence similarity 123C##AK095696|FAM123C|205147|family with sequence similarity 123C##AK291424|FAM123C|205147|family with sequence similarity 123C##BC113445|FAM123C|205147|family with sequence similarity 123C##BC113447|FAM123C|205147|family with sequence similarity 123C##BC143806|FAM123C|205147|family with sequence similarity 123C##NM_001105193|FAM123C|205147|family with sequence similarity 123C##BC105013|GPR148|344561|G protein-coupled receptor 148##BC105041|GPR148|344561|G protein-coupled receptor 148##NM_207364|GPR148|344561|G protein-coupled receptor 148##AY569570|GPR148|344561|G protein-coupled receptor 148##AY280965|GPR148|344561|G protein-coupled receptor 148##AF249745|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##NM_015320|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##NM_032995|ARHGEF4|50649|Rho guanine nucleotide exchange factor (GEF) 4##BC066347|FAM168B|130074|family with sequence similarity 168, member B##BC110642|FAM168B|130074|family with sequence similarity 168, member B##NM_001009993|FAM168B|130074|family with sequence similarity 168, member B##AK126289|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_001100623|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2##NM_017958|PLEKHB2|55041|pleckstrin homology domain containing, family B (evectins) member 2	0.0	
chr9	135991150	135991285	reg1044160.p1	3.713	+	NM_001807 S79774 M85201 BC042510 AK299965	-53842	+	TSC_hg19_v1_chr9_+_135906386 AK000194 AK097295 AK293980 BC006409 AY007123 DQ892071 DQ895265 AJ420443 BC030157	-84829	+	NM_001122823 NM_012087 TSC_hg19_v1_chr9_+_135906094 AK225761 AK311481 AK055092 AF133124 BC011355 BC017337	-85118	+	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	5282	-	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	33469	-	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	48080	-	NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_001122823|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_012087|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK225761|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK311481|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK055092|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF133124|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC011355|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC017337|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1	0.0	
chr9	136294802	136294898	reg1037612.p1	3.713	+	TSC_hg19_v1_chr9_+_136293730 AJ011374	-1110	+	AJ305314 AJ420810 AJ420811 BC103828 BC103829 BC103830 AY055376 TSC_hg19_v1_chr9_+_136287508 AF414401	-7373	+	AB069698 NM_139025 NM_139026 NM_139027 AK292439	-7718	+	NM_001135775 NM_001242369 NM_001242370 NM_017586 AK075416 TSC_hg19_v1_chr9_+_136325120 AK304524 AK074852 AK311325 AK296343 AK075548 BC030558 AJ011373 AY358452 AK298820 CU688906	30289	+	DQ891513 DQ894704 AK294974 BC013740 TSC_hg19_v1_chr9_-_136344222 AJ011372 AK225106 AK222919 AK074836 AK096630 Y17803 AK074927 NM_001145099 NM_017585	49378	-	NM_001080483	95217	-	AJ011374|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ305314|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ420810|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AJ420811|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103828|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103829|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##BC103830|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AY055376|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AF414401|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AB069698|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_139025|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_139026|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_139027|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##AK292439|ADAMTS13|11093|ADAM metallopeptidase with thrombospondin type 1 motif, 13##NM_001135775|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242369|C9orf7|11094|chromosome 9 open reading frame 7##NM_001242370|C9orf7|11094|chromosome 9 open reading frame 7##NM_017586|C9orf7|11094|chromosome 9 open reading frame 7##AK075416|C9orf7|11094|chromosome 9 open reading frame 7##AK304524|C9orf7|11094|chromosome 9 open reading frame 7##AK074852|C9orf7|11094|chromosome 9 open reading frame 7##AK311325|C9orf7|11094|chromosome 9 open reading frame 7##AK296343|C9orf7|11094|chromosome 9 open reading frame 7##AK075548|C9orf7|11094|chromosome 9 open reading frame 7##BC030558|C9orf7|11094|chromosome 9 open reading frame 7##AJ011373|C9orf7|11094|chromosome 9 open reading frame 7##AY358452|C9orf7|11094|chromosome 9 open reading frame 7##AK298820|C9orf7|11094|chromosome 9 open reading frame 7##DQ891513|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##DQ894704|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK294974|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##BC013740|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AJ011372|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK225106|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK222919|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074836|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK096630|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##Y17803|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##AK074927|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001145099|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_017585|SLC2A6|11182|solute carrier family 2 (facilitated glucose transporter), member 6##NM_001080483|TMEM8C|389827|transmembrane protein 8C	0.988517	CTCF.p2:-3:0.989
chr10	125950928	125951037	reg1045882.p1	3.712	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	-97829	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-99083	-	BC137492 BC146862 AY358565 NM_198148	-299486	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	156491	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	156536	-	NM_001146340 TSC_hg19_v1_chr10_-_126138606	187595	-	BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##NM_001146340|NKX1-2|390010|NK1 homeobox 2	0.395129	CTCF.p2:29:0.395
chr11	3901090	3901270	reg1023683.p2	3.712	+	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	-24251	+	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	-38981	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	-39025	-	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	214809	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	214886	+	TSC_hg19_v1_chr11_+_4116085 AK297988 BC006498 CU675435 DQ893028 DQ896272	214979	+	NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1##X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1##AK297988|RRM1|6240|ribonucleotide reductase M1##BC006498|RRM1|6240|ribonucleotide reductase M1##DQ893028|RRM1|6240|ribonucleotide reductase M1##DQ896272|RRM1|6240|ribonucleotide reductase M1	0.0	
chr14	39639572	39639753	reg1025139.p2	3.712	+	AK310730 TSC_hg19_v1_chr14_-_39639538 AK294339 AL833179 BC047328 BX161510 AK315900 BX248013 AK056690 NM_001079537 NM_177452 BC030604	-90	-	AF027150 NM_001009182 NM_001009183 NM_003616 BC028095 BC104968 AK313947 AB037701 AB037702 AB037703	-56195	+	TSC_hg19_v1_chr14_-_39572440 AK299862 BC036649 NM_006364 AK303485	-67229	-	TSC_hg19_v1_chr14_+_39644403 NM_002687 AK292579 AK223612 U77718 BC062602 Y09703 Y10351	4767	+	AK304622 TSC_hg19_v1_chr14_+_39649841	10114	+	AK314069 BX648228 NM_054024 BC035981 BC130537 BC130563 AB527370 AM393252 AM393582 HQ258350 AF390175	63556	+	AK310730|TRAPPC6B|122553|trafficking protein particle complex 6B##AK294339|TRAPPC6B|122553|trafficking protein particle complex 6B##AL833179|TRAPPC6B|122553|trafficking protein particle complex 6B##BC047328|TRAPPC6B|122553|trafficking protein particle complex 6B##BX161510|TRAPPC6B|122553|trafficking protein particle complex 6B##AK315900|TRAPPC6B|122553|trafficking protein particle complex 6B##BX248013|TRAPPC6B|122553|trafficking protein particle complex 6B##AK056690|TRAPPC6B|122553|trafficking protein particle complex 6B##NM_001079537|TRAPPC6B|122553|trafficking protein particle complex 6B##NM_177452|TRAPPC6B|122553|trafficking protein particle complex 6B##BC030604|TRAPPC6B|122553|trafficking protein particle complex 6B##AF027150|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_001009182|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_001009183|GEMIN2|8487|gem (nuclear organelle) associated protein 2##NM_003616|GEMIN2|8487|gem (nuclear organelle) associated protein 2##BC028095|GEMIN2|8487|gem (nuclear organelle) associated protein 2##BC104968|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AK313947|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037701|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037702|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AB037703|GEMIN2|8487|gem (nuclear organelle) associated protein 2##AK299862|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##BC036649|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##NM_006364|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##AK303485|SEC23A|10484|Sec23 homolog A (S. cerevisiae)##NM_002687|PNN|5411|pinin, desmosome associated protein##AK292579|PNN|5411|pinin, desmosome associated protein##AK223612|PNN|5411|pinin, desmosome associated protein##U77718|PNN|5411|pinin, desmosome associated protein##BC062602|PNN|5411|pinin, desmosome associated protein##Y09703|PNN|5411|pinin, desmosome associated protein##AK304622|PNN|5411|pinin, desmosome associated protein##AK314069|MIA2|117153|melanoma inhibitory activity 2##BX648228|MIA2|117153|melanoma inhibitory activity 2##NM_054024|MIA2|117153|melanoma inhibitory activity 2##BC035981|MIA2|117153|melanoma inhibitory activity 2##BC130537|MIA2|117153|melanoma inhibitory activity 2##BC130563|MIA2|117153|melanoma inhibitory activity 2##AM393252|MIA2|117153|melanoma inhibitory activity 2##AM393582|MIA2|117153|melanoma inhibitory activity 2##HQ258350|MIA2|117153|melanoma inhibitory activity 2##AF390175|MIA2|117153|melanoma inhibitory activity 2	0.0	
chr2	16954881	16954959	reg1004825.p2	3.712	+	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	-107776	-	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-872753	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-872925	+	DQ860102 NM_001099218	744785	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	766967	+	TSC_hg19_v1_chr2_+_17721989 AF039555 U14747 AB001104	767100	+	BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1##AF039555|VSNL1|7447|visinin-like 1##U14747|VSNL1|7447|visinin-like 1##AB001104|VSNL1|7447|visinin-like 1	0.0	
chr2	61698558	61698624	reg1033326.p1	3.712	+	TSC_hg19_v1_chr2_-_61697899 AB011142 BC141839	-648	-	TSC_hg19_v1_chr2_-_61697846 NM_014709	-734	-	TSC_hg19_v1_chr2_+_61404793 AL833813	-293802	+	TSC_hg19_v1_chr2_-_61764664 Y08614 AK312426	66167	-	TSC_hg19_v1_chr2_-_61765358 AL833550	66764	-	TSC_hg19_v1_chr2_-_61765383 BC032847 CR749840	66788	-	AB011142|USP34|9736|ubiquitin specific peptidase 34##BC141839|USP34|9736|ubiquitin specific peptidase 34##NM_014709|USP34|9736|ubiquitin specific peptidase 34##AL833813|AHSA2|130872|AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)##Y08614|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##AK312426|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##AL833550|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##BC032847|XPO1|7514|exportin 1 (CRM1 homolog, yeast)##CR749840|XPO1|7514|exportin 1 (CRM1 homolog, yeast)	0.0	
chr4	103749488	103749636	reg1030292.p2	3.712	+	TSC_hg19_v1_chr4_-_103748970 BC037894 NM_003340 NM_181886 NM_181888 BC003395 AK315775 NM_181889	-426	-	TSC_hg19_v1_chr4_-_103748709 BC066917 NM_181887 NM_181891 AL833414	-876	-	AK095822 TSC_hg19_v1_chr4_-_103748316 NM_181892	-1266	-	NM_181893 NM_181890	40454	-	TSC_hg19_v1_chr4_+_103790148 NM_001008388	40590	+	TSC_hg19_v1_chr4_+_103790197 AK292134 BC020831 BX537971 BC032300 AM392809 AM393385	40654	+	BC037894|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_003340|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181886|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181888|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##BC003395|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##AK315775|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181889|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##BC066917|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181887|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181891|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##AL833414|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##AK095822|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181892|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181893|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_181890|UBE2D3|7323|ubiquitin-conjugating enzyme E2D 3##NM_001008388|CISD2|493856|CDGSH iron sulfur domain 2##AK292134|CISD2|493856|CDGSH iron sulfur domain 2##BC020831|CISD2|493856|CDGSH iron sulfur domain 2##BX537971|CISD2|493856|CDGSH iron sulfur domain 2##BC032300|CISD2|493856|CDGSH iron sulfur domain 2##AM392809|CISD2|493856|CDGSH iron sulfur domain 2##AM393385|CISD2|493856|CDGSH iron sulfur domain 2	0.010898	
chr5	131995680	131995812	reg1034184.p1	3.712	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	-1856	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-103106	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	-116554	-	NM_000589 NM_172348	13626	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	77471	-	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	87398	+	BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A##AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2	0.0	
chr6	34624402	34624582	reg1038142.p2	3.712	+	AB031549 BC021299 AF071538 AK301543 NM_001252294 NM_012391	-100396	-	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	-141838	+	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	-190588	+	TSC_hg19_v1_chr6_-_34664565 AK313410 BC002328 BC010184 AK056964 BC075810	40054	-	TSC_hg19_v1_chr6_-_34664631 NM_022758 NM_024294	40134	-	NM_003093	100378	+	AB031549|SPDEF|25803|SAM pointed domain containing ets transcription factor##BC021299|SPDEF|25803|SAM pointed domain containing ets transcription factor##AF071538|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK301543|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_001252294|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_012391|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK313410|C6orf106|64771|chromosome 6 open reading frame 106##BC002328|C6orf106|64771|chromosome 6 open reading frame 106##BC010184|C6orf106|64771|chromosome 6 open reading frame 106##AK056964|C6orf106|64771|chromosome 6 open reading frame 106##BC075810|C6orf106|64771|chromosome 6 open reading frame 106##NM_022758|C6orf106|64771|chromosome 6 open reading frame 106##NM_024294|C6orf106|64771|chromosome 6 open reading frame 106##NM_003093|SNRPC|6631|small nuclear ribonucleoprotein polypeptide C	0.0	
chr6	53412671	53412850	reg1034571.p1	3.712	+	TSC_hg19_v1_chr6_-_53409900 AK304288 NM_001197115 NM_001498	-2849	-	TSC_hg19_v1_chr6_-_53409836 AK313480	-2925	-	TSC_hg19_v1_chr6_-_53409821 AB262176 BC022487	-2947	-	EF633513 NM_001003760	117745	-	TSC_hg19_v1_chr6_+_53659294 AK021896	246540	+	TSC_hg19_v1_chr6_+_53659776 BC003193 NM_018214	246999	+	AK304288|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001197115|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##NM_001498|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AK313480|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AB262176|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC022487|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EF633513|KLHL31|401265|kelch-like 31 (Drosophila)##NM_001003760|KLHL31|401265|kelch-like 31 (Drosophila)##AK021896|LRRC1|55227|leucine rich repeat containing 1##BC003193|LRRC1|55227|leucine rich repeat containing 1##NM_018214|LRRC1|55227|leucine rich repeat containing 1	0.0	
chr8	52874828	52875009	reg1035681.p1	3.712	+	AK299452 TSC_hg19_v1_chr8_+_52812239	-62695	+	TSC_hg19_v1_chr8_-_52811724 NM_052937	-63191	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	-63316	-	BC026316 AB011107 AK311188 BC031075 NM_014682 BC025662	447402	-	BC130641 BC130643 BC144534 AY358213 NM_207413	603075	-	AK291699 D86958 TSC_hg19_v1_chr8_-_53626990	752068	-	NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AB011107|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##AK311188|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC031075|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##NM_014682|ST18|9705|suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)##BC130641|FAM150A|389658|family with sequence similarity 150, member A##BC130643|FAM150A|389658|family with sequence similarity 150, member A##BC144534|FAM150A|389658|family with sequence similarity 150, member A##AY358213|FAM150A|389658|family with sequence similarity 150, member A##NM_207413|FAM150A|389658|family with sequence similarity 150, member A##AK291699|RB1CC1|9821|RB1-inducible coiled-coil 1##D86958|RB1CC1|9821|RB1-inducible coiled-coil 1	0.0	
chr9	136469522	136469614	reg1033743.p2	3.712	+	AB528863 BC146946 BC146961 NM_001080515	-24213	-	TSC_hg19_v1_chr9_+_136399879 BC050544 NM_014694	-69643	+	AB011177 NM_001145320	-72283	+	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	31940	+	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	133910	-	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	135418	-	BC146946|FAM163B|642968|family with sequence similarity 163, member B##BC146961|FAM163B|642968|family with sequence similarity 163, member B##NM_001080515|FAM163B|642968|family with sequence similarity 163, member B##BC050544|ADAMTSL2|9719|ADAMTS-like 2##NM_014694|ADAMTSL2|9719|ADAMTS-like 2##AB011177|ADAMTSL2|9719|ADAMTS-like 2##NM_001145320|ADAMTSL2|9719|ADAMTS-like 2##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase	0.021031	
chrX	53025048	53025146	reg1036184.p2	3.712	+	BC067819 NM_001242489 NM_001242490 NM_001242492 NM_001242493 NM_001242494 NM_001242495 NM_001242496 NM_001242497 NM_014138	-451	-	AK091598 AX747084 BX649013 CR749619 TSC_hg19_v1_chrX_-_52987693 AK057692 NM_001242491	-37435	-	AL834135 NM_001099684	-39469	-	BC009861 NM_018969	53408	+	TSC_hg19_v1_chrX_+_53111548 NM_022117 AK131220 AK292462 AY040871 AF273046 BC024270 AL713652 AB463325 AM392716 AF254794	86545	+	TSC_hg19_v1_chrX_+_53123332 EF565109	98309	+	BC067819|FAM156A|29057|family with sequence similarity 156, member A##NM_001242489|FAM156A|29057|family with sequence similarity 156, member A##NM_001242490|FAM156A|29057|family with sequence similarity 156, member A##NM_001242492|FAM156A|29057|family with sequence similarity 156, member A##NM_001242493|FAM156A|29057|family with sequence similarity 156, member A##NM_001242494|FAM156A|29057|family with sequence similarity 156, member A##NM_001242495|FAM156A|29057|family with sequence similarity 156, member A##NM_001242496|FAM156A|29057|family with sequence similarity 156, member A##NM_001242497|FAM156A|29057|family with sequence similarity 156, member A##NM_014138|FAM156A|29057|family with sequence similarity 156, member A##AK091598|FAM156B|727866|family with sequence similarity 156, member B##BX649013|FAM156B|727866|family with sequence similarity 156, member B##CR749619|FAM156A|29057|family with sequence similarity 156, member A##AK057692|FAM156A|29057|family with sequence similarity 156, member A##NM_001242491|FAM156A|29057|family with sequence similarity 156, member A##AL834135|FAM156A|29057|family with sequence similarity 156, member A##NM_001099684|FAM156B|727866|family with sequence similarity 156, member B##BC009861|GPR173|54328|G protein-coupled receptor 173##NM_018969|GPR173|54328|G protein-coupled receptor 173##NM_022117|TSPYL2|64061|TSPY-like 2##AK131220|TSPYL2|64061|TSPY-like 2##AK292462|TSPYL2|64061|TSPY-like 2##AY040871|TSPYL2|64061|TSPY-like 2##AF273046|TSPYL2|64061|TSPY-like 2##BC024270|TSPYL2|64061|TSPY-like 2##AL713652|TSPYL2|64061|TSPY-like 2##AM392716|TSPYL2|64061|TSPY-like 2##AF254794|TSPYL2|64061|TSPY-like 2##EF565109|LOC100132984|100132984|uncharacterized LOC100132984	0.113641	
chr11	54979469	54979575	reg1039848.p1	3.711	+	NM_001004703	-3464241	+	BC140750 NM_001005272	-3567075	-	BC136850 BC136851 NM_001005270	-4975452	-	AF521869 BC001862 NM_024114	50135	+	BC140748 NM_001005274	131129	+	NM_001005275	155837	+	NM_001004703|OR4C46|119749|olfactory receptor, family 4, subfamily C, member 46##BC140750|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##NM_001005272|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##BC136850|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC136851|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##NM_001005270|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##AF521869|TRIM48|79097|tripartite motif containing 48##BC001862|TRIM48|79097|tripartite motif containing 48##NM_024114|TRIM48|79097|tripartite motif containing 48##BC140748|OR4A16|81327|olfactory receptor, family 4, subfamily A, member 16##NM_001005274|OR4A16|81327|olfactory receptor, family 4, subfamily A, member 16##NM_001005275|OR4A15|81328|olfactory receptor, family 4, subfamily A, member 15	0.0	
chr1	156595909	156596049	reg1010870.p2	3.711	+	AB049054 NM_021817 AK294131 AK310758 AK308805 AK090712 AK308980 AK293797 BC029864	-6793	+	AB528795 BC032436 TSC_hg19_v1_chr1_-_156571275 BC040147 AK125763 BC056904 AK000256 AK293026 AK301232 NM_015590 NM_182679	-24722	-	TSC_hg19_v1_chr1_+_156561594 AK316083	-34377	+	TSC_hg19_v1_chr1_+_156611723 AY358372 NM_021948 NM_198427	15750	+	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	15975	+	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	51166	-	AB049054|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##NM_021817|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK294131|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK310758|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308805|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK090712|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK308980|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##AK293797|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC029864|HAPLN2|60484|hyaluronan and proteoglycan link protein 2##BC032436|GPATCH4|54865|G patch domain containing 4##BC040147|GPATCH4|54865|G patch domain containing 4##AK125763|GPATCH4|54865|G patch domain containing 4##BC056904|GPATCH4|54865|G patch domain containing 4##AK000256|GPATCH4|54865|G patch domain containing 4##AK293026|GPATCH4|54865|G patch domain containing 4##AK301232|GPATCH4|54865|G patch domain containing 4##NM_015590|GPATCH4|54865|G patch domain containing 4##NM_182679|GPATCH4|54865|G patch domain containing 4##AY358372|BCAN|63827|brevican##NM_021948|BCAN|63827|brevican##NM_198427|BCAN|63827|brevican##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin	0.0	
chr12	31207025	31207150	reg1036007.p2	3.711	+	AK300920 NM_001080509 TSC_hg19_v1_chr12_+_31079866 BC146917 BC146922	-127223	+	TSC_hg19_v1_chr12_+_31079681 AK293947	-127427	+	TSC_hg19_v1_chr12_+_31079362 BC084571	-127726	+	TSC_hg19_v1_chr12_-_31226728 AK096360	19645	-	TSC_hg19_v1_chr12_+_31226789 BC148224 BC111733 NM_004399 NM_030653 NM_152438 AK297607 BC050069	19691	+	TSC_hg19_v1_chr12_+_31226805 U75968 BC011264	19721	+	AK300920|TSPAN11|441631|tetraspanin 11##NM_001080509|TSPAN11|441631|tetraspanin 11##BC146917|TSPAN11|441631|tetraspanin 11##BC146922|TSPAN11|441631|tetraspanin 11##AK293947|TSPAN11|441631|tetraspanin 11##AK096360|LOC100506660|100506660|uncharacterized LOC100506660##BC148224|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_004399|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_030653|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##NM_152438|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK297607|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC050069|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##U75968|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##BC011264|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11	0.996681	CTCF.p2:4:0.997
chr14	61447906	61447972	reg1035677.p1	3.711	+	TSC_hg19_v1_chr14_+_61447932 BC050349	-3	+	NM_001172702 NM_153811 AF543422 TSC_hg19_v1_chr14_+_61447920	-62	+	BC136606 BC136607 AK293158 BC108284 NM_020810	-193	-	TSC_hg19_v1_chr14_+_61447962 BX648332 BC110378 BC064429 BX248072 AF070578 AK303839	116	+	AB464738 TSC_hg19_v1_chr14_-_61747887	299938	-	BC101726 BC113559 TSC_hg19_v1_chr14_-_61747937	299986	-	BC050349|SLC38A6|145389|solute carrier family 38, member 6##NM_001172702|SLC38A6|145389|solute carrier family 38, member 6##NM_153811|SLC38A6|145389|solute carrier family 38, member 6##AF543422|SLC38A6|145389|solute carrier family 38, member 6##BC136606|TRMT5|57570|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)##BC136607|TRMT5|57570|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)##AK293158|TRMT5|57570|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)##BC108284|TRMT5|57570|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)##NM_020810|TRMT5|57570|TRM5 tRNA methyltransferase 5 homolog (S. cerevisiae)##BX648332|SLC38A6|145389|solute carrier family 38, member 6##BC110378|SLC38A6|145389|solute carrier family 38, member 6##BC064429|SLC38A6|145389|solute carrier family 38, member 6##BX248072|SLC38A6|145389|solute carrier family 38, member 6##AF070578|SLC38A6|145389|solute carrier family 38, member 6##AK303839|SLC38A6|145389|solute carrier family 38, member 6##BC101726|TMEM30B|161291|transmembrane protein 30B##BC113559|TMEM30B|161291|transmembrane protein 30B	0.0	
chr16	3222014	3222124	reg1038120.p1	3.711	+	CU675598 TSC_hg19_v1_chr16_-_3191371	-30710	-	TSC_hg19_v1_chr16_+_3185119 NM_001134655 BC007287 BC116445 AK291789 AK055337 AK289834	-36910	+	TSC_hg19_v1_chr16_+_3185058 NM_004220	-37017	+	BC069335 NM_012360 Y14442	32177	+	AK315036 BC032575 AF060866 TSC_hg19_v1_chr16_-_3285159 BC025293 BC012909 AK056010 NM_001145447 NM_003454	63059	-	Y14443 BC054005 NM_001145448 NM_198088 NM_001145446 NM_198087	63338	-	NM_001134655|ZNF213|7760|zinc finger protein 213##BC007287|ZNF213|7760|zinc finger protein 213##AK291789|ZNF213|7760|zinc finger protein 213##AK055337|ZNF213|7760|zinc finger protein 213##AK289834|ZNF213|7760|zinc finger protein 213##NM_004220|ZNF213|7760|zinc finger protein 213##BC069335|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##NM_012360|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##Y14442|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##AK315036|ZNF200|7752|zinc finger protein 200##BC032575|ZNF200|7752|zinc finger protein 200##AF060866|ZNF200|7752|zinc finger protein 200##BC025293|ZNF200|7752|zinc finger protein 200##BC012909|ZNF200|7752|zinc finger protein 200##AK056010|ZNF200|7752|zinc finger protein 200##NM_001145447|ZNF200|7752|zinc finger protein 200##NM_003454|ZNF200|7752|zinc finger protein 200##Y14443|ZNF200|7752|zinc finger protein 200##BC054005|ZNF200|7752|zinc finger protein 200##NM_001145448|ZNF200|7752|zinc finger protein 200##NM_198088|ZNF200|7752|zinc finger protein 200##NM_001145446|ZNF200|7752|zinc finger protein 200##NM_198087|ZNF200|7752|zinc finger protein 200	0.0	
chr16	69598280	69598460	reg1029636.p2	3.711	+	BC004373 AK291576 TSC_hg19_v1_chr16_+_69458565	-139806	+	TSC_hg19_v1_chr16_+_69458522 AB009282 NM_030579 BX647922 BC014431	-139854	+	TSC_hg19_v1_chr16_-_69419884 AF002999 BC024890 NM_005652	-178510	-	NM_001113178 NM_006599 NM_138713 NM_138714 NM_173214 NM_173215 TSC_hg19_v1_chr16_+_69599868	1498	+	TSC_hg19_v1_chr16_+_69599907 AB020634 BC146765 AF089824 BC089395 BC131509	1546	+	AJ243298 AJ243299 TSC_hg19_v1_chr16_+_69600112 AJ005683 AJ005684	1811	+	BC004373|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##AK291576|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##AB009282|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##NM_030579|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##BX647922|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##BC014431|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##AF002999|TERF2|7014|telomeric repeat binding factor 2##BC024890|TERF2|7014|telomeric repeat binding factor 2##NM_005652|TERF2|7014|telomeric repeat binding factor 2##NM_001113178|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_006599|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_138713|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_138714|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_173214|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_173215|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AB020634|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##BC146765|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AF089824|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##BC089395|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##BC131509|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ243298|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ243299|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ005683|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ005684|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	0.046937	
chr18	33552553	33552643	reg1029459.p1	3.711	+	NM_020474 BC047746 U41514 AB529022 X85018	-318019	+	AK095502 AK300660 BC039404 NM_001098817 NM_194281	-474673	-	BC130288 BC136314 AF492004 AF533251 AK055775 NM_145756	-595305	-	NM_001201474 NM_001201475 NM_001201476 NM_031446 BC108730 TSC_hg19_v1_chr18_+_33552656 BC119765 BC119766 AK311536 AF277182 AF277189 BC025950	69	+	TSC_hg19_v1_chr18_-_33647515 DQ892910 EU176720 AF419845 NM_018170 BC000225 AK314569	94829	-	BC010136 TSC_hg19_v1_chr18_-_33647520	94921	-	NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##AK095502|INO80C|125476|INO80 complex subunit C##AK300660|INO80C|125476|INO80 complex subunit C##BC039404|INO80C|125476|INO80 complex subunit C##NM_001098817|INO80C|125476|INO80 complex subunit C##NM_194281|INO80C|125476|INO80 complex subunit C##BC130288|ZNF396|252884|zinc finger protein 396##BC136314|ZNF396|252884|zinc finger protein 396##AF492004|ZNF396|252884|zinc finger protein 396##AF533251|ZNF396|252884|zinc finger protein 396##AK055775|ZNF396|252884|zinc finger protein 396##NM_145756|ZNF396|252884|zinc finger protein 396##NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21##NM_031446|C18orf21|83608|chromosome 18 open reading frame 21##BC108730|C18orf21|83608|chromosome 18 open reading frame 21##BC119765|C18orf21|83608|chromosome 18 open reading frame 21##BC119766|C18orf21|83608|chromosome 18 open reading frame 21##AF277182|C18orf21|83608|chromosome 18 open reading frame 21##AF277189|C18orf21|83608|chromosome 18 open reading frame 21##BC025950|C18orf21|83608|chromosome 18 open reading frame 21##DQ892910|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##EU176720|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AF419845|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##NM_018170|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC000225|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK314569|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC010136|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A	0.0	
chr19	16296256	16296352	reg1018957.p2	3.711	+	TSC_hg19_v1_chr19_+_16296220 AK312058 BC000639 AL050157 NM_014077 BC017286 AF151902 AM393549 AM393669	-72	+	AB050868 BC069320 BC069428 BC069524 NM_054113 HQ258101 BC112200 BC113591	-11994	-	TSC_hg19_v1_chr19_+_16254533 AK027792 AK131222 AK300027 AK298682 AK307563 BC016826	-41802	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	12446	+	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	139337	+	AF134053 TSC_hg19_v1_chr19_+_16435803	139465	+	AK312058|FAM32A|26017|family with sequence similarity 32, member A##BC000639|FAM32A|26017|family with sequence similarity 32, member A##AL050157|FAM32A|26017|family with sequence similarity 32, member A##NM_014077|FAM32A|26017|family with sequence similarity 32, member A##BC017286|FAM32A|26017|family with sequence similarity 32, member A##AF151902|FAM32A|26017|family with sequence similarity 32, member A##AM393549|FAM32A|26017|family with sequence similarity 32, member A##AM393669|FAM32A|26017|family with sequence similarity 32, member A##AB050868|CIB3|117286|calcium and integrin binding family member 3##BC069320|CIB3|117286|calcium and integrin binding family member 3##BC069428|CIB3|117286|calcium and integrin binding family member 3##BC069524|CIB3|117286|calcium and integrin binding family member 3##NM_054113|CIB3|117286|calcium and integrin binding family member 3##HQ258101|CIB3|117286|calcium and integrin binding family member 3##BC112200|CIB3|117286|calcium and integrin binding family member 3##BC113591|CIB3|117286|calcium and integrin binding family member 3##AK027792|HSH2D|84941|hematopoietic SH2 domain containing##AK131222|HSH2D|84941|hematopoietic SH2 domain containing##AK300027|HSH2D|84941|hematopoietic SH2 domain containing##AK298682|HSH2D|84941|hematopoietic SH2 domain containing##AK307563|HSH2D|84941|hematopoietic SH2 domain containing##BC016826|HSH2D|84941|hematopoietic SH2 domain containing##AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)##AF134053|KLF2|10365|Kruppel-like factor 2 (lung)	0.0	
chr19	2094464	2094588	reg1039328.p1	3.711	+	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	-9283	-	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-43293	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-48285	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	1739	-	TSC_hg19_v1_chr19_-_2096297 AL832474	1768	-	TSC_hg19_v1_chr19_+_2096913 AY358444 NM_001031735 NM_001039846 DQ196309 DQ196310 AK301957 AY753639 BC014609 BC040964 BC010443	2334	+	AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A##AY358444|IZUMO4|113177|IZUMO family member 4##NM_001031735|IZUMO4|113177|IZUMO family member 4##NM_001039846|IZUMO4|113177|IZUMO family member 4##DQ196309|IZUMO4|113177|IZUMO family member 4##DQ196310|IZUMO4|113177|IZUMO family member 4##AK301957|IZUMO4|113177|IZUMO family member 4##AY753639|IZUMO4|113177|IZUMO family member 4##BC014609|IZUMO4|113177|IZUMO family member 4##BC040964|IZUMO4|113177|IZUMO family member 4##BC010443|IZUMO4|113177|IZUMO family member 4	0.0	
chr2	120771185	120771365	reg1028772.p1	3.711	+	TSC_hg19_v1_chr2_+_120770652 AK023019 BC054508 AK290895 BC032822 NM_001184938	-542	+	TSC_hg19_v1_chr2_+_120770604 NM_001184937 NM_001184939 NM_020909	-672	+	M68941 NM_002830 TSC_hg19_v1_chr2_+_120517497 AK314836 BC010674	-253875	+	TSC_hg19_v1_chr2_-_120980957 BC016849 AK289880 BC080607 AK024632	209662	-	TSC_hg19_v1_chr2_-_120980977 AF530474 NM_024121	209723	-	NM_002881 TSC_hg19_v1_chr2_+_121010418	239145	+	AK023019|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC054508|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK290895|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC032822|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184938|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184937|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184939|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_020909|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC016849|TMEM185B|79134|transmembrane protein 185B##BC080607|TMEM185B|79134|transmembrane protein 185B##AK024632|TMEM185B|79134|transmembrane protein 185B##AF530474|TMEM185B|79134|transmembrane protein 185B##NM_024121|TMEM185B|79134|transmembrane protein 185B##NM_002881|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)	0.0	
chr3	16550120	16550241	reg1028553.p1	3.711	+	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-243472	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	-243791	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-333986	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	4838	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	5044	-	BX648638 AK303026 NM_001190811	96090	-	NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like	0.0	
chr5	132581494	132581561	reg1035118.p2	3.711	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-148636	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-153124	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-175424	+	TSC_hg19_v1_chr5_-_132948202 AK055684	366672	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	366711	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	722848	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.0	
chr6	21597366	21597468	reg1034354.p1	3.711	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	-3045	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1062694	+	CR749285 NM_001243076	-1193384	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	69242	+	BC015850 NM_000948	700312	-	X54394 X54393 GQ305133 M58594 NM_001163558	705630	-	NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin	0.0	
chr6	28104473	28104579	reg1022339.p1	3.711	+	AK025844 AK294017 AK309837 NM_025231 TSC_hg19_v1_chr6_+_28092406 BC004255	-12127	+	NM_003447	-56045	+	BC109251 BC110457 NM_012367	-179508	+	TSC_hg19_v1_chr6_-_28104623 AK309286 BC043177	72	-	TSC_hg19_v1_chr6_+_28109660 AB208793 BC096282 BC096283 BC096284 BC130032 NM_006298 U57796	5165	+	AK292767 BC050562 BC015543 BC039027 TSC_hg19_v1_chr6_-_28186889	82250	-	AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16##NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16##BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16##NM_003447|ZNF165|7718|zinc finger protein 165##BC109251|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##BC110457|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##NM_012367|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##AK309286|LOC100129195|100129195|uncharacterized LOC100129195##BC043177|LOC100129195|100129195|uncharacterized LOC100129195##AB208793|ZNF192|7745|zinc finger protein 192##BC096282|ZNF192|7745|zinc finger protein 192##BC096283|ZNF192|7745|zinc finger protein 192##BC096284|ZNF192|7745|zinc finger protein 192##BC130032|ZNF192|7745|zinc finger protein 192##NM_006298|ZNF192|7745|zinc finger protein 192##U57796|ZNF192|7745|zinc finger protein 192##AK292767|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC050562|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC015543|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1##BC039027|TOB2P1|222699|transducer of ERBB2, 2 pseudogene 1	0.0	
chr8	93824622	93824734	reg1036239.p1	3.711	+	NM_001198633 NM_175634 TSC_hg19_v1_chr8_-_93115455	-709223	-	NM_001198628	-712763	-	NM_001198625 NM_001198626 NM_001198627 NM_001198631 NM_001198634 NM_001198679	-716797	-	AK096398 NM_001191036	153087	-	NM_001191035 TSC_hg19_v1_chr8_-_93978373 BC031029 AK097956 BC110326 DQ351291 NM_001171795 NM_001171796 NM_001171797 NM_001171798 NM_001171799	153644	-	BC089453 NM_001242668	354400	-	NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198628|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198625|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198626|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198627|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198631|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_001198679|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##AK096398|C8orf83|286144|chromosome 8 open reading frame 83##NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83##NM_001191035|C8orf83|286144|chromosome 8 open reading frame 83##BC031029|C8orf83|286144|chromosome 8 open reading frame 83##AK097956|C8orf83|286144|chromosome 8 open reading frame 83##BC110326|C8orf83|286144|chromosome 8 open reading frame 83##DQ351291|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171795|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171796|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171797|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171798|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171799|C8orf83|286144|chromosome 8 open reading frame 83##BC089453|LOC389676|389676|uncharacterized LOC389676##NM_001242668|LOC389676|389676|uncharacterized LOC389676	0.260036	CTCF.p2:-14:0.260
chr9	132500158	132500319	reg1009251.p2	3.711	+	TSC_hg19_v1_chr9_+_132428029 AF061970	-72172	+	BC014645 NM_016307 TSC_hg19_v1_chr9_+_132427927	-72315	+	CU688098 EU831817 EU831894 BC065913 TSC_hg19_v1_chr9_-_132404419 AK023004 BC001719 AK225618 AK299193 AK000555 AK292807 NM_001202403 NM_017873 NM_177999	-95869	-	AB590756 AF027740 AF217965 AF010316 TSC_hg19_v1_chr9_-_132515313 AK311947 BC008280 NM_004878	15078	-	TSC_hg19_v1_chr9_+_132565426 AF317129 NM_014506	65182	+	TSC_hg19_v1_chr9_+_132565465 BC015578 DQ893204 DQ893205 DQ893696 DQ896532 DQ896533 DQ896867	65235	+	AF061970|PRRX2|51450|paired related homeobox 2##BC014645|PRRX2|51450|paired related homeobox 2##NM_016307|PRRX2|51450|paired related homeobox 2##EU831817|ASB6|140459|ankyrin repeat and SOCS box containing 6##EU831894|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC065913|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK023004|ASB6|140459|ankyrin repeat and SOCS box containing 6##BC001719|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK225618|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK299193|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK000555|ASB6|140459|ankyrin repeat and SOCS box containing 6##AK292807|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_001202403|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_017873|ASB6|140459|ankyrin repeat and SOCS box containing 6##NM_177999|ASB6|140459|ankyrin repeat and SOCS box containing 6##AF027740|PTGES|9536|prostaglandin E synthase##AF217965|PTGES|9536|prostaglandin E synthase##AF010316|PTGES|9536|prostaglandin E synthase##AK311947|PTGES|9536|prostaglandin E synthase##BC008280|PTGES|9536|prostaglandin E synthase##NM_004878|PTGES|9536|prostaglandin E synthase##AF317129|TOR1B|27348|torsin family 1, member B (torsin B)##NM_014506|TOR1B|27348|torsin family 1, member B (torsin B)##BC015578|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893204|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893205|TOR1B|27348|torsin family 1, member B (torsin B)##DQ893696|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896532|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896533|TOR1B|27348|torsin family 1, member B (torsin B)##DQ896867|TOR1B|27348|torsin family 1, member B (torsin B)	0.0	
chrX	107443037	107443168	reg1036375.p2	3.711	+	BC061696 NM_052936 NM_178270 BC041862 AK293533 AJ504651 AK314429 AJ320508 AJ320509 AK054927	-108135	+	AB528690 BT019689 GQ129344 GQ129345 AK295996 AK309326 TSC_hg19_v1_chrX_-_107334773 AB009619 AY057056 BC011960 AK058108 D83197 NM_002814 NM_170750	-108291	-	BX648658 NM_001170553 NM_182607 AK301783 BC043216 BX640913 AK315846 AK301311 AK292472	-154843	+	BC140855 BC144669 BC000874 BC070203 NM_033641 D21337	238505	-	BT007228 L22763 U04845 NM_001847 BC005305	239561	-	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	239982	+	BC061696|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##NM_052936|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##NM_178270|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##BC041862|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK293533|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ504651|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK314429|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ320508|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AJ320509|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##AK054927|ATG4A|115201|ATG4 autophagy related 4 homolog A (S. cerevisiae)##BT019689|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129344|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##GQ129345|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK295996|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK309326|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AB009619|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AY057056|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BC011960|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##AK058108|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##D83197|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_002814|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##NM_170750|PSMD10|5716|proteasome (prosome, macropain) 26S subunit, non-ATPase, 10##BX648658|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_001170553|VSIG1|340547|V-set and immunoglobulin domain containing 1##NM_182607|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301783|VSIG1|340547|V-set and immunoglobulin domain containing 1##BC043216|VSIG1|340547|V-set and immunoglobulin domain containing 1##BX640913|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK315846|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK301311|VSIG1|340547|V-set and immunoglobulin domain containing 1##AK292472|VSIG1|340547|V-set and immunoglobulin domain containing 1##BC140855|COL4A6|1288|collagen, type IV, alpha 6##BC144669|COL4A6|1288|collagen, type IV, alpha 6##BC000874|COL4A6|1288|collagen, type IV, alpha 6##BC070203|COL4A6|1288|collagen, type IV, alpha 6##NM_033641|COL4A6|1288|collagen, type IV, alpha 6##D21337|COL4A6|1288|collagen, type IV, alpha 6##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5	0.976168	CTCF.p2:-9:0.976
chr10	121221754	121221885	reg1033068.p2	3.710	+	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-254558	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-283472	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-283516	-	NM_002925	74225	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	80371	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	134289	-	BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.0	
chr1	1237457	1237563	reg1041841.p1	3.710	+	NM_001130413 BC040882 AK127357	-21619	+	TSC_hg19_v1_chr1_+_1209415 DQ898177	-28110	+	TSC_hg19_v1_chr1_-_1209229 BC094777 NM_058167 NM_194315 NM_194457 NM_194458	-28280	-	TSC_hg19_v1_chr1_-_1243285 BC051194 NM_030649	5881	-	TSC_hg19_v1_chr1_+_1243987 AK075292 BC034304 NM_153339 AK298218	6488	+	AB463529 AM393218 CR533557 AK056652 AK022675 TSC_hg19_v1_chr1_-_1260041 BC042444 AK092190 AK297350 BC008041 BC020199 BC007978 AK291387 AK021939 AK058018 AL136813 NM_017871 AK023356 AK027767	22514	-	NM_001130413|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##BC040882|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##AK127357|SCNN1D|6339|sodium channel, nonvoltage-gated 1, delta##BC094777|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_058167|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194315|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194457|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194458|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##BC051194|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3##NM_030649|ACAP3|116983|ArfGAP with coiled-coil, ankyrin repeat and PH domains 3##AK075292|PUSL1|126789|pseudouridylate synthase-like 1##BC034304|PUSL1|126789|pseudouridylate synthase-like 1##NM_153339|PUSL1|126789|pseudouridylate synthase-like 1##AK298218|PUSL1|126789|pseudouridylate synthase-like 1##AM393218|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##CR533557|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK056652|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK022675|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC042444|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK092190|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK297350|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC008041|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC020199|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##BC007978|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK291387|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK021939|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK058018|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AL136813|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##NM_017871|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK023356|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like##AK027767|CPSF3L|54973|cleavage and polyadenylation specific factor 3-like	0.999532	CTCF.p2:-5:1.000
chr1	155827089	155827265	reg1030272.p2	3.710	+	TSC_hg19_v1_chr1_-_155827021 AB195687 AB195688	-125	-	TSC_hg19_v1_chr1_-_155827003 AB232668 AY335492 BC114629 BC115703 BX537764 NM_001037533 NM_032292 AY335490 BX648043 AK098734 BX648802	-201	-	TSC_hg19_v1_chr1_-_155774769 AK315191 BC071650	-52386	-	NM_152280 TSC_hg19_v1_chr1_+_155829357 BC039205 BC013690 D38522 AK296378 CR749792 AK027540 AK074931 BC004291 CU691678	2228	+	TSC_hg19_v1_chr1_+_155853548 AK026178	26396	+	BC104186 BC104187 AF084462 U71203 U78165 Y07566 TSC_hg19_v1_chr1_-_155881141	53927	-	AB195687|GON4L|54856|gon-4-like (C. elegans)##AB195688|GON4L|54856|gon-4-like (C. elegans)##AB232668|GON4L|54856|gon-4-like (C. elegans)##AY335492|GON4L|54856|gon-4-like (C. elegans)##BC114629|GON4L|54856|gon-4-like (C. elegans)##BC115703|GON4L|54856|gon-4-like (C. elegans)##BX537764|GON4L|54856|gon-4-like (C. elegans)##NM_001037533|GON4L|54856|gon-4-like (C. elegans)##NM_032292|GON4L|54856|gon-4-like (C. elegans)##AY335490|GON4L|54856|gon-4-like (C. elegans)##BX648043|GON4L|54856|gon-4-like (C. elegans)##AK098734|GON4L|54856|gon-4-like (C. elegans)##BX648802|GON4L|54856|gon-4-like (C. elegans)##AK315191|GON4L|54856|gon-4-like (C. elegans)##BC071650|GON4L|54856|gon-4-like (C. elegans)##NM_152280|SYT11|23208|synaptotagmin XI##BC039205|SYT11|23208|synaptotagmin XI##BC013690|SYT11|23208|synaptotagmin XI##D38522|SYT11|23208|synaptotagmin XI##AK296378|SYT11|23208|synaptotagmin XI##CR749792|SYT11|23208|synaptotagmin XI##AK027540|SYT11|23208|synaptotagmin XI##AK074931|SYT11|23208|synaptotagmin XI##BC004291|SYT11|23208|synaptotagmin XI##AK026178|SYT11|23208|synaptotagmin XI##BC104186|RIT1|6016|Ras-like without CAAX 1##BC104187|RIT1|6016|Ras-like without CAAX 1##AF084462|RIT1|6016|Ras-like without CAAX 1##U71203|RIT1|6016|Ras-like without CAAX 1##U78165|RIT1|6016|Ras-like without CAAX 1##Y07566|RIT1|6016|Ras-like without CAAX 1	0.0	
chr1	182112572	182112753	reg1001726.p2	3.710	+	BC137223 BC137224 AK128654 NM_001009992	-81865	-	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-659962	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-1054797	+	TSC_hg19_v1_chr1_-_182354649 AK301600	242020	-	TSC_hg19_v1_chr1_-_182357758 BC127883	245101	-	AY486122 S70290 AB528372 DQ893278 DQ896609 EU832658 EU832735 TSC_hg19_v1_chr1_-_182357935	245241	-	BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase##AY486122|GLUL|2752|glutamate-ammonia ligase##S70290|GLUL|2752|glutamate-ammonia ligase##DQ893278|GLUL|2752|glutamate-ammonia ligase##DQ896609|GLUL|2752|glutamate-ammonia ligase##EU832658|GLUL|2752|glutamate-ammonia ligase##EU832735|GLUL|2752|glutamate-ammonia ligase	0.0	
chr16	57392789	57392855	reg1032046.p2	3.710	+	NM_002990 AK311970 U83171 U83239 BC027952 CU693342 AB590299 DQ890922 DQ893311 DQ894072 DQ896625 EU176526	-112	+	TSC_hg19_v1_chr16_-_57318585 AK130584 AK313910 NM_015993	-74243	-	CU678172 BC002760 TSC_hg19_v1_chr16_-_57318556 AK289599 AF137386	-74311	-	AK222692 TSC_hg19_v1_chr16_+_57406382	13563	+	TSC_hg19_v1_chr16_+_57406401 AK223351 AK313806 U84487 U91835 BC001163 BC016164 NM_002996 AB590256 DQ890704 DQ891871 DQ893888 DQ895059 CU674588 CR457426	13617	+	BC069107 NM_002987 BC112066 BC112068	45873	+	NM_002990|CCL22|6367|chemokine (C-C motif) ligand 22##AK311970|CCL22|6367|chemokine (C-C motif) ligand 22##U83171|CCL22|6367|chemokine (C-C motif) ligand 22##U83239|CCL22|6367|chemokine (C-C motif) ligand 22##BC027952|CCL22|6367|chemokine (C-C motif) ligand 22##DQ890922|CCL22|6367|chemokine (C-C motif) ligand 22##DQ893311|CCL22|6367|chemokine (C-C motif) ligand 22##DQ894072|CCL22|6367|chemokine (C-C motif) ligand 22##DQ896625|CCL22|6367|chemokine (C-C motif) ligand 22##EU176526|CCL22|6367|chemokine (C-C motif) ligand 22##AK130584|PLLP|51090|plasmolipin##AK313910|PLLP|51090|plasmolipin##NM_015993|PLLP|51090|plasmolipin##BC002760|PLLP|51090|plasmolipin##AK289599|PLLP|51090|plasmolipin##AF137386|PLLP|51090|plasmolipin##AK222692|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK223351|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK313806|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U84487|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U91835|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC001163|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC016164|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002996|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ890704|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ891871|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ893888|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ895059|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##CR457426|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC069107|CCL17|6361|chemokine (C-C motif) ligand 17##NM_002987|CCL17|6361|chemokine (C-C motif) ligand 17##BC112066|CCL17|6361|chemokine (C-C motif) ligand 17##BC112068|CCL17|6361|chemokine (C-C motif) ligand 17	0.0	
chr22	21995875	21996028	reg1032874.p1	3.710	+	TSC_hg19_v1_chr22_+_21987057 AK302030 AK093365 AX748079 BC033499 NM_152612	-8925	+	TSC_hg19_v1_chr22_-_21984367 BC133043 BC133047	-11551	-	TSC_hg19_v1_chr22_-_21984304 BC064568 BC053663 BC017281 BC110075 BC110799 BC057814 NM_001017964 BC096754	-11636	-	NM_022044 BC132849 BC132851 TSC_hg19_v1_chr22_+_21996560	602	+	TSC_hg19_v1_chr22_+_21996575 AY359118	623	+	TSC_hg19_v1_chr22_+_21996608 BC006248 AB043007	650	+	AK302030|CCDC116|164592|coiled-coil domain containing 116##AK093365|CCDC116|164592|coiled-coil domain containing 116##BC033499|CCDC116|164592|coiled-coil domain containing 116##NM_152612|CCDC116|164592|coiled-coil domain containing 116##BC133043|YDJC|150223|YdjC homolog (bacterial)##BC133047|YDJC|150223|YdjC homolog (bacterial)##BC064568|YDJC|150223|YdjC homolog (bacterial)##BC053663|YDJC|150223|YdjC homolog (bacterial)##BC017281|YDJC|150223|YdjC homolog (bacterial)##BC110075|YDJC|150223|YdjC homolog (bacterial)##BC110799|YDJC|150223|YdjC homolog (bacterial)##BC057814|YDJC|150223|YdjC homolog (bacterial)##NM_001017964|YDJC|150223|YdjC homolog (bacterial)##BC096754|YDJC|150223|YdjC homolog (bacterial)##NM_022044|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC132849|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC132851|SDF2L1|23753|stromal cell-derived factor 2-like 1##AY359118|SDF2L1|23753|stromal cell-derived factor 2-like 1##AB043007|SDF2L1|23753|stromal cell-derived factor 2-like 1	0.650213	CTCF.p2:-32:0.650
chr3	28099205	28099312	reg1037196.p1	3.710	+	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	-335057	-	AB031038 BC131712 NM_005442 AB463608 BC037568	-335465	-	TSC_hg19_v1_chr3_-_27525893 AK309734	-573328	-	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	183840	+	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	291124	-	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	291303	-	AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2	0.0	
chr5	137883814	137883932	reg1031392.p1	3.710	+	TSC_hg19_v1_chr5_-_137878926 BC014269 NM_004730	-4930	-	TSC_hg19_v1_chr5_-_137878906 X81625	-4966	-	TSC_hg19_v1_chr5_-_137878899 AK312510	-4978	-	BC030634 CU674234 TSC_hg19_v1_chr5_-_137911029 AB463063 EU446981 AK297795 L15189	27146	-	AK222758 TSC_hg19_v1_chr5_-_137911101 BC000478 BC024034 AK297897 AK293990 L11066 AK315177	27215	-	NM_004134	27444	-	BC014269|ETF1|2107|eukaryotic translation termination factor 1##NM_004730|ETF1|2107|eukaryotic translation termination factor 1##X81625|ETF1|2107|eukaryotic translation termination factor 1##AK312510|ETF1|2107|eukaryotic translation termination factor 1##BC030634|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##EU446981|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK297795|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##L15189|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK222758|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC000478|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC024034|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK297897|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK293990|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##L11066|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK315177|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##NM_004134|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)	0.042118	
chr5	82181876	82182056	reg1037291.p2	3.710	+	BC093982 BC112191 NM_001017971	-580801	+	TSC_hg19_v1_chr5_-_81574219 NM_001025	-607747	-	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	-607795	-	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	191231	-	TSC_hg19_v1_chr5_-_82373255 NM_174909	191296	-	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	191417	+	BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001025|RPS23|6228|ribosomal protein S23##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##NM_174909|TMEM167A|153339|transmembrane protein 167A##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4	0.726816	CTCF.p2:49:0.703
chr9	139793991	139794093	reg1018626.p2	3.710	+	U12597 BC033810 AK054686 BC032410 TSC_hg19_v1_chr9_+_139780991	-13055	+	TSC_hg19_v1_chr9_+_139780967 BX538160 BC043492 NM_021138 AK222961 AK294607 AK298370	-13089	+	BT009863 CR541914 DQ891577 DQ894770 AB590058 TSC_hg19_v1_chr9_-_139760757 AJ005259 AB002282 AB002283 BC015500 NM_003792 NM_153200	-33304	-	TSC_hg19_v1_chr9_-_139839068 AK026081	45026	-	BC014297 TSC_hg19_v1_chr9_-_139839082 AK315738	45042	-	BC014130 TSC_hg19_v1_chr9_-_139839140 BC035355 BC031100 NM_018998	45094	-	BC033810|TRAF2|7186|TNF receptor-associated factor 2##AK054686|TRAF2|7186|TNF receptor-associated factor 2##BC032410|TRAF2|7186|TNF receptor-associated factor 2##BX538160|TRAF2|7186|TNF receptor-associated factor 2##BC043492|TRAF2|7186|TNF receptor-associated factor 2##NM_021138|TRAF2|7186|TNF receptor-associated factor 2##AK222961|TRAF2|7186|TNF receptor-associated factor 2##AK294607|TRAF2|7186|TNF receptor-associated factor 2##AK298370|TRAF2|7186|TNF receptor-associated factor 2##BT009863|EDF1|8721|endothelial differentiation-related factor 1##CR541914|EDF1|8721|endothelial differentiation-related factor 1##DQ891577|EDF1|8721|endothelial differentiation-related factor 1##DQ894770|EDF1|8721|endothelial differentiation-related factor 1##AB002282|EDF1|8721|endothelial differentiation-related factor 1##AB002283|EDF1|8721|endothelial differentiation-related factor 1##BC015500|EDF1|8721|endothelial differentiation-related factor 1##NM_003792|EDF1|8721|endothelial differentiation-related factor 1##NM_153200|EDF1|8721|endothelial differentiation-related factor 1##AK026081|FBXW5|54461|F-box and WD repeat domain containing 5##BC014297|FBXW5|54461|F-box and WD repeat domain containing 5##AK315738|FBXW5|54461|F-box and WD repeat domain containing 5##BC014130|FBXW5|54461|F-box and WD repeat domain containing 5##BC035355|FBXW5|54461|F-box and WD repeat domain containing 5##BC031100|FBXW5|54461|F-box and WD repeat domain containing 5##NM_018998|FBXW5|54461|F-box and WD repeat domain containing 5	0.0	
chr9	2015289	2015439	reg1031418.p1	3.710	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-68	+	AF130729 NM_181872	-964755	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-964994	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	606443	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	606710	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	606748	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.0	
chrX	148828407	148828507	reg1024854.p2	3.710	+	NM_005366 AY747607 BC004479	-34688	+	AK127849 NM_001011544	-58555	+	AK097391 AK096308 AK297335 TSC_hg19_v1_chrX_-_148713449 NM_001174092 NM_032508 AF530473	-114974	-	NM_001164415 NM_016153	27268	+	AK292272 AK313321 NM_001080790 BC002351 NM_005365	35138	+	AK313943 NM_001166400 NM_001166401 NM_005364 BC002455 BC012744	181513	+	NM_005366|MAGEA11|4110|melanoma antigen family A, 11##AY747607|MAGEA11|4110|melanoma antigen family A, 11##BC004479|MAGEA11|4110|melanoma antigen family A, 11##AK127849|MAGEA11|4110|melanoma antigen family A, 11##NM_001011544|MAGEA11|4110|melanoma antigen family A, 11##AK097391|TMEM185A|84548|transmembrane protein 185A##AK096308|TMEM185A|84548|transmembrane protein 185A##AK297335|TMEM185A|84548|transmembrane protein 185A##NM_001174092|TMEM185A|84548|transmembrane protein 185A##NM_032508|TMEM185A|84548|transmembrane protein 185A##AF530473|TMEM185A|84548|transmembrane protein 185A##NM_001164415|HSFX2|100130086|heat shock transcription factor family, X linked 2##NM_016153|HSFX1|100506164|heat shock transcription factor family, X linked 1##AK292272|MAGEA9|4108|melanoma antigen family A, 9##AK313321|MAGEA9|4108|melanoma antigen family A, 9##NM_001080790|MAGEA9B|728269|melanoma antigen family A, 9B##BC002351|MAGEA9|4108|melanoma antigen family A, 9##NM_005365|MAGEA9|4108|melanoma antigen family A, 9##AK313943|MAGEA8|4107|melanoma antigen family A, 8##NM_001166400|MAGEA8|4107|melanoma antigen family A, 8##NM_001166401|MAGEA8|4107|melanoma antigen family A, 8##NM_005364|MAGEA8|4107|melanoma antigen family A, 8##BC002455|MAGEA8|4107|melanoma antigen family A, 8##BC012744|MAGEA8|4107|melanoma antigen family A, 8	0.038694	
chr10	12648107	12648219	reg1030524.p2	3.709	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	-256386	+	TSC_hg19_v1_chr10_+_12391709 BC035745	-256446	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	-256588	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	395536	-	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	493982	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	555405	+	AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10	0.0	
chr11	58414656	58414782	reg1033312.p1	3.709	+	BC069167 NM_000614 BC068030 AK314118 BC074963 BC074964 CU686605 S72921	-24534	+	TSC_hg19_v1_chr11_+_58346697 AB056107 AB057443 CU690828	-68024	+	TSC_hg19_v1_chr11_+_58346591 BC051743 NM_001197051 NM_053023	-68136	+	AF023466 BC009785 NM_005838 NM_201648	84688	-	BC021682 NM_145016 BC016789	197269	-	NM_001220494 AK300479 BC008353	280418	+	BC069167|CNTF|1270|ciliary neurotrophic factor##NM_000614|CNTF|1270|ciliary neurotrophic factor##BC068030|CNTF|1270|ciliary neurotrophic factor##AK314118|CNTF|1270|ciliary neurotrophic factor##BC074963|CNTF|1270|ciliary neurotrophic factor##BC074964|CNTF|1270|ciliary neurotrophic factor##S72921|CNTF|1270|ciliary neurotrophic factor##AB056107|ZFP91|80829|zinc finger protein 91 homolog (mouse)##AB057443|ZFP91-CNTF|386607|ZFP91-CNTF readthrough##BC051743|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_001197051|ZFP91|80829|zinc finger protein 91 homolog (mouse)##NM_053023|ZFP91|80829|zinc finger protein 91 homolog (mouse)##AF023466|GLYAT|10249|glycine-N-acyltransferase##BC009785|GLYAT|10249|glycine-N-acyltransferase##NM_005838|GLYAT|10249|glycine-N-acyltransferase##NM_201648|GLYAT|10249|glycine-N-acyltransferase##BC021682|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_145016|GLYATL2|219970|glycine-N-acyltransferase-like 2##BC016789|GLYATL2|219970|glycine-N-acyltransferase-like 2##NM_001220494|GLYATL1|92292|glycine-N-acyltransferase-like 1##AK300479|GLYATL1|92292|glycine-N-acyltransferase-like 1##BC008353|GLYATL1|92292|glycine-N-acyltransferase-like 1	0.085204	
chr1	44106112	44106188	reg1033139.p1	3.709	+	AK127007 TSC_hg19_v1_chr1_+_44064516	-41638	+	TSC_hg19_v1_chr1_+_43996556 AB621807 AB177856 NM_002840 NM_130440 Y00815 BC048768 AB177857 BC048416	-109546	+	TSC_hg19_v1_chr1_-_43919547 AK096244 AY037165 AY775560 NM_001190880 NM_001243526 NM_031207	-186547	-	TSC_hg19_v1_chr1_+_44115796 NM_014663	9649	+	AK300039 TSC_hg19_v1_chr1_+_44115819	9661	+	BC002558 TSC_hg19_v1_chr1_+_44115828 AB014577	9694	+	AK127007|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##AB177856|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##NM_002840|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##NM_130440|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##Y00815|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##BC048768|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##AB177857|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##BC048416|PTPRF|5792|protein tyrosine phosphatase, receptor type, F##AK096244|HYI|81888|hydroxypyruvate isomerase (putative)##AY037165|HYI|81888|hydroxypyruvate isomerase (putative)##AY775560|HYI|81888|hydroxypyruvate isomerase (putative)##NM_001190880|HYI|81888|hydroxypyruvate isomerase (putative)##NM_001243526|HYI|81888|hydroxypyruvate isomerase (putative)##NM_031207|HYI|81888|hydroxypyruvate isomerase (putative)##NM_014663|KDM4A|9682|lysine (K)-specific demethylase 4A##AK300039|KDM4A|9682|lysine (K)-specific demethylase 4A##BC002558|KDM4A|9682|lysine (K)-specific demethylase 4A##AB014577|KDM4A|9682|lysine (K)-specific demethylase 4A	0.0	
chr16	29678098	29678279	reg1039047.p2	3.709	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-3174	+	TSC_hg19_v1_chr16_+_29674568 J04168 J04536 NM_003123	-3615	+	TSC_hg19_v1_chr16_+_29674567 AK292626 AK313750	-3623	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	12206	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	12294	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	79113	-	DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##J04536|SPN|6693|sialophorin##NM_003123|SPN|6693|sialophorin##AK292626|SPN|6693|sialophorin##AK313750|SPN|6693|sialophorin##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54	0.0	
chr17	25659790	25659865	reg1007115.p1	3.709	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-38546	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-38705	+	NM_001190452	-3637391	+	BC035488 BC042106 NM_014238	139202	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	298341	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	298376	+	AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_001190452|MTRNR2L1|100462977|MT-RNR2-like 1##BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.0	
chr18	13608269	13608402	reg1039646.p1	3.709	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-389550	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-616990	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-660271	+	NM_001003674 NM_001003675	3329	+	AF009426 AF009427 NM_004338 NM_181483	12531	+	TSC_hg19_v1_chr18_-_13726549 AK055618	118171	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.0	
chr20	32366452	32366556	reg1033219.p1	3.709	+	BC132873 BC144188 BC157823 BC146811 BC094738 NM_032819 BC063492 BC040440 AB587355 HQ258664	-46708	+	TSC_hg19_v1_chr20_-_32308117 CR533471 CU674580 EU832287 EU832372 BC001147 AK023879 AF072864 AL136648 AK301532 AK316589 AK297018 NM_007238 NM_183397	-58490	-	TSC_hg19_v1_chr20_-_32274190 BC065188 S49592 M96577 BC050369 NM_005225	-92307	-	TSC_hg19_v1_chr20_+_32399127 NM_176812	32582	+	TSC_hg19_v1_chr20_+_32399155 AB100261 BC033859 AY726594 AY329085	32716	+	TSC_hg19_v1_chr20_+_32581531 NM_007367 NM_016732	214975	+	BC132873|ZNF341|84905|zinc finger protein 341##BC144188|ZNF341|84905|zinc finger protein 341##BC157823|ZNF341|84905|zinc finger protein 341##BC146811|ZNF341|84905|zinc finger protein 341##BC094738|ZNF341|84905|zinc finger protein 341##NM_032819|ZNF341|84905|zinc finger protein 341##BC063492|ZNF341|84905|zinc finger protein 341##BC040440|ZNF341|84905|zinc finger protein 341##HQ258664|ZNF341|84905|zinc finger protein 341##CR533471|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##EU832287|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##EU832372|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##BC001147|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK023879|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AF072864|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AL136648|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK301532|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK316589|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##AK297018|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##NM_007238|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##NM_183397|PXMP4|11264|peroxisomal membrane protein 4, 24kDa##S49592|E2F1|1869|E2F transcription factor 1##M96577|E2F1|1869|E2F transcription factor 1##BC050369|E2F1|1869|E2F transcription factor 1##NM_005225|E2F1|1869|E2F transcription factor 1##NM_176812|CHMP4B|128866|charged multivesicular body protein 4B##AB100261|CHMP4B|128866|charged multivesicular body protein 4B##BC033859|CHMP4B|128866|charged multivesicular body protein 4B##AY726594|CHMP4B|128866|charged multivesicular body protein 4B##AY329085|CHMP4B|128866|charged multivesicular body protein 4B##NM_007367|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))##NM_016732|RALY|22913|RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))	0.0	
chr20	5626262	5626431	reg1022317.p2	3.709	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	-34759	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-331310	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-518651	+	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	104720	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	265780	+	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	304777	-	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	0.0	
chr2	170862382	170862514	reg1036260.p2	3.709	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-178490	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-181063	-	TSC_hg19_v1_chr2_+_170662051 M20328 M35261	-200304	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	172237	+	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	709410	+	TSC_hg19_v1_chr2_+_171571942 AB464708	709529	+	NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##M20328|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##M35261|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor	1.136408	CTCF.p2:15:0.353	CTCF.p2:-80:0.784
chr2	86268171	86268347	reg1041344.p2	3.709	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-152173	-	AY152815 NM_001042437	-173467	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-287254	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	64724	-	NM_015425	65018	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	65082	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.0	
chr6	15491852	15492006	reg1010473.p2	3.709	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-242816	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-243028	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-245517	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	171248	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	171361	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	637373	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.0	
chr9	123659394	123659574	reg1027204.p1	3.709	+	BC108663 NM_001009936 NM_015651 TSC_hg19_v1_chr9_-_123639617	-19884	-	TSC_hg19_v1_chr9_-_123639471 AK122744 BC022374 AK303433	-20006	-	AK096706 TSC_hg19_v1_chr9_+_123605361 BX648532 BC028086 BC052374 BC040969	-54110	+	AK295959 NM_001190947	17365	-	AB590501 BT019408 CU692854 TSC_hg19_v1_chr9_-_123688443 U19261 BC024145	28919	-	AK090468 NM_005658	29688	-	BC108663|PHF19|26147|PHD finger protein 19##NM_001009936|PHF19|26147|PHD finger protein 19##NM_015651|PHF19|26147|PHD finger protein 19##AK122744|PHF19|26147|PHD finger protein 19##BC022374|PHF19|26147|PHD finger protein 19##AK303433|PHF19|26147|PHD finger protein 19##AK096706|LOC253039|253039|uncharacterized LOC253039##BX648532|LOC253039|253039|uncharacterized LOC253039##BC028086|LOC253039|253039|uncharacterized LOC253039##BC052374|LOC253039|253039|uncharacterized LOC253039##BC040969|LOC253039|253039|uncharacterized LOC253039##AK295959|TRAF1|7185|TNF receptor-associated factor 1##NM_001190947|TRAF1|7185|TNF receptor-associated factor 1##BT019408|TRAF1|7185|TNF receptor-associated factor 1##U19261|TRAF1|7185|TNF receptor-associated factor 1##BC024145|TRAF1|7185|TNF receptor-associated factor 1##AK090468|TRAF1|7185|TNF receptor-associated factor 1##NM_005658|TRAF1|7185|TNF receptor-associated factor 1	0.023543	
chr10	22177993	22178113	reg1035874.p1	3.708	+	AY598745 CU687346 NM_001195626 AF060929 AF060934 AF060935 AF060936 AF060937 AF060938	-354428	+	TSC_hg19_v1_chr10_+_21823382 AB209755 BC052798 BC094844 BC129946	-354659	+	U13948 TSC_hg19_v1_chr10_+_21823274 BC065376 BC080577	-354777	+	AY225122 AK027263 TSC_hg19_v1_chr10_-_22292522 BC014436	114396	-	TSC_hg19_v1_chr10_-_22292660 BC110894 NM_022365 AK308369	114612	-	NM_001199938	320858	-	AY598745|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##NM_001195626|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060929|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060934|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060935|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060936|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060937|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060938|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AB209755|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC052798|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC094844|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC129946|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##U13948|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC065376|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##BC080577|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AY225122|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK027263|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC014436|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1	0.0	
chr11	32074015	32074169	reg1002626.p2	3.708	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-234614	-	AB209177 TSC_hg19_v1_chr11_-_31832871 BX640762 NM_000280 NM_001604	-241223	-	BC011953 TSC_hg19_v1_chr11_-_31832790	-241305	-	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	38385	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	38607	+	AK093168 BC032861 NM_001198551 NM_001198552	378268	-	AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AB209177|PAX6|5080|paired box 6##BX640762|PAX6|5080|paired box 6##NM_000280|PAX6|5080|paired box 6##NM_001604|PAX6|5080|paired box 6##BC011953|PAX6|5080|paired box 6##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1	0.0	
chr11	9587591	9587682	reg1036187.p1	3.708	+	NM_003442 BC020219 AK313330 TSC_hg19_v1_chr11_+_9482560 AK291133 AK297214 BC014458	-105093	+	BC004388 TSC_hg19_v1_chr11_-_9482148 BC036621	-105508	-	AK312885 TSC_hg19_v1_chr11_+_9406199 AF098799 BC114929	-181416	+	TSC_hg19_v1_chr11_+_9595216 NM_003390 U10564 BC070052	7577	+	X62048 TSC_hg19_v1_chr11_+_9595313	7689	+	BC051831 TSC_hg19_v1_chr11_+_9595437	7797	+	NM_003442|ZNF143|7702|zinc finger protein 143##BC020219|ZNF143|7702|zinc finger protein 143##AK313330|ZNF143|7702|zinc finger protein 143##AK291133|ZNF143|7702|zinc finger protein 143##AK297214|ZNF143|7702|zinc finger protein 143##BC014458|ZNF143|7702|zinc finger protein 143##BC004388|LOC644656|644656|uncharacterized LOC644656##BC036621|LOC644656|644656|uncharacterized LOC644656##AK312885|IPO7|10527|importin 7##AF098799|IPO7|10527|importin 7##BC114929|IPO7|10527|importin 7##NM_003390|WEE1|7465|WEE1 homolog (S. pombe)##U10564|WEE1|7465|WEE1 homolog (S. pombe)##BC070052|WEE1|7465|WEE1 homolog (S. pombe)##X62048|WEE1|7465|WEE1 homolog (S. pombe)##BC051831|WEE1|7465|WEE1 homolog (S. pombe)	0.0	
chr12	31812158	31812336	reg1036358.p2	3.708	+	BC039535 NM_173802	-127	+	AK290248 NM_001135864	-12154	+	TSC_hg19_v1_chr12_-_31743924 BC068580 NM_144973	-68329	-	NM_001135863 TSC_hg19_v1_chr12_+_31812621 AL832339 BC039107	367	+	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	69727	-	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	69809	-	BC039535|METTL20|254013|methyltransferase like 20##NM_173802|METTL20|254013|methyltransferase like 20##AK290248|METTL20|254013|methyltransferase like 20##NM_001135864|METTL20|254013|methyltransferase like 20##BC068580|DENND5B|160518|DENN/MADD domain containing 5B##NM_144973|DENND5B|160518|DENN/MADD domain containing 5B##NM_001135863|METTL20|254013|methyltransferase like 20##AL832339|METTL20|254013|methyltransferase like 20##BC039107|METTL20|254013|methyltransferase like 20##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)	0.822648	CTCF.p2:-94:0.823
chr12	90005803	90005870	reg1033480.p1	3.708	+	AK297677 NM_001199781 NM_001199782 NM_172240	-85798	-	CU693124 TSC_hg19_v1_chr12_-_89919778 BX647258 AK074772 AK295596 BC026080 EF011619	-86076	-	TSC_hg19_v1_chr12_-_89919208 AK123106 NM_001199777	-86574	-	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	44015	-	TSC_hg19_v1_chr12_+_90102640 BC040326	96851	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	97709	+	AK297677|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199781|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_001199782|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##NM_172240|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BX647258|POC1B-GALNT4|100528030|POC1B-GALNT4 readthrough##AK074772|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK295596|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##BC026080|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##EF011619|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##AK123106|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##NM_001199777|POC1B|282809|POC1 centriolar protein homolog B (Chlamydomonas)##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC040326|LOC338758|338758|uncharacterized LOC338758##BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758	0.0	
chr15	58024999	58025180	reg1015569.p2	3.708	+	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	-26109	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	-26203	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	-140924	+	AB015228 AB015227 NM_170697	281150	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	332789	-	NM_001206897 NM_003888 NM_170696	333031	-	AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	0.0	
chr2	114647329	114647449	reg1025242.p2	3.708	+	AK025657 AK315719 TSC_hg19_v1_chr2_-_114514220 BC050096 BC018537 NM_025181	-133092	-	AF529364 CU676258 TSC_hg19_v1_chr2_-_114514079 AY358620	-133311	-	TSC_hg19_v1_chr2_+_114384849 AK289496 AF095350 AF095351 BC126129 BC144050 BC144052	-262483	+	TSC_hg19_v1_chr2_+_114647549 BC044590 NM_005721 AF127773	158	+	TSC_hg19_v1_chr2_+_114647665 AK316213	276	+	TSC_hg19_v1_chr2_+_114647673 AK303988	283	+	AK025657|SLC35F5|80255|solute carrier family 35, member F5##AK315719|SLC35F5|80255|solute carrier family 35, member F5##BC050096|SLC35F5|80255|solute carrier family 35, member F5##BC018537|SLC35F5|80255|solute carrier family 35, member F5##NM_025181|SLC35F5|80255|solute carrier family 35, member F5##AF529364|SLC35F5|80255|solute carrier family 35, member F5##AY358620|SLC35F5|80255|solute carrier family 35, member F5##AK289496|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095350|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095351|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC126129|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144050|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144052|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC044590|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##NM_005721|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AF127773|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AK316213|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AK303988|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	0.0	
chr21	42783753	42783881	reg1030432.p2	3.708	+	TSC_hg19_v1_chr21_+_42742025 AK298780	-41798	+	TSC_hg19_v1_chr21_+_42733956 M30818 NM_002463 AK308060 AK126107	-49879	+	AK125528 NM_058186 NM_206964 TSC_hg19_v1_chr21_+_42688738 BC057829 AF375989 AJ409094 AY040086 AY358459 HQ257913 AF494379	-95084	+	AK096355 NM_001144925	8663	+	NM_002462 TSC_hg19_v1_chr21_+_42798165 AK225885 AK315465 NM_001178046 M33882 BC052255	14277	+	AK291813 TSC_hg19_v1_chr21_-_42880030 AK296860 NM_001135099 BC051839 AF270487 BC035623	96170	-	AK298780|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##M30818|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##NM_002463|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK308060|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK126107|LOC100131190|100131190|uncharacterized LOC100131190##AK125528|FAM3B|54097|family with sequence similarity 3, member B##NM_058186|FAM3B|54097|family with sequence similarity 3, member B##NM_206964|FAM3B|54097|family with sequence similarity 3, member B##BC057829|FAM3B|54097|family with sequence similarity 3, member B##AF375989|FAM3B|54097|family with sequence similarity 3, member B##AJ409094|FAM3B|54097|family with sequence similarity 3, member B##AY040086|FAM3B|54097|family with sequence similarity 3, member B##AY358459|FAM3B|54097|family with sequence similarity 3, member B##HQ257913|FAM3B|54097|family with sequence similarity 3, member B##AF494379|FAM3B|54097|family with sequence similarity 3, member B##AK096355|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001144925|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_002462|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK225885|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK315465|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001178046|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##M33882|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##BC052255|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK291813|TMPRSS2|7113|transmembrane protease, serine 2##AK296860|TMPRSS2|7113|transmembrane protease, serine 2##NM_001135099|TMPRSS2|7113|transmembrane protease, serine 2##BC051839|TMPRSS2|7113|transmembrane protease, serine 2##AF270487|TMPRSS2|7113|transmembrane protease, serine 2##BC035623|TMPRSS2|7113|transmembrane protease, serine 2	0.109175	
chr2	182303140	182303270	reg1036110.p2	3.708	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-457378	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-457562	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-457835	+	NM_000885	18413	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	18845	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	19117	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.889016	CTCF.p2:-3:0.851
chr3	113522118	113522215	reg1032063.p2	3.708	+	TSC_hg19_v1_chr3_+_113465913 BC013138 AF113129	-56242	+	TSC_hg19_v1_chr3_+_113465902 AK314779	-56262	+	TSC_hg19_v1_chr3_+_113465881 NM_001690 AK293804	-56291	+	BC035040 NM_017577 TSC_hg19_v1_chr3_+_113557732 AK293884 AK292846	35545	+	AK304142 NM_001172105 AY358725 AK292964	94193	+	TSC_hg19_v1_chr3_+_113666756 BC035230 NM_173570 AK127996 AK127025	144561	+	BC013138|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##AF113129|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##AK314779|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##NM_001690|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##AK293804|ATP6V1A|523|ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A##BC035040|GRAMD1C|54762|GRAM domain containing 1C##NM_017577|GRAMD1C|54762|GRAM domain containing 1C##AK293884|GRAMD1C|54762|GRAM domain containing 1C##AK292846|GRAMD1C|54762|GRAM domain containing 1C##AK304142|GRAMD1C|54762|GRAM domain containing 1C##NM_001172105|GRAMD1C|54762|GRAM domain containing 1C##AY358725|GRAMD1C|54762|GRAM domain containing 1C##AK292964|GRAMD1C|54762|GRAM domain containing 1C##BC035230|ZDHHC23|254887|zinc finger, DHHC-type containing 23##NM_173570|ZDHHC23|254887|zinc finger, DHHC-type containing 23##AK127996|ZDHHC23|254887|zinc finger, DHHC-type containing 23##AK127025|ZDHHC23|254887|zinc finger, DHHC-type containing 23	0.0	
chr3	173302073	173302168	reg1036055.p2	3.708	+	BC032555 NM_014932	-185877	+	BC034496 AF345909 AF404758 AK093041 AX747878 NM_031955	-443112	-	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	-829818	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	856600	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	1274970	+	TSC_hg19_v1_chr3_-_176914267 BX648935	3612130	-	BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BC034496|SPATA16|83893|spermatogenesis associated 16##AF345909|SPATA16|83893|spermatogenesis associated 16##AF404758|SPATA16|83893|spermatogenesis associated 16##AK093041|SPATA16|83893|spermatogenesis associated 16##NM_031955|SPATA16|83893|spermatogenesis associated 16##BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.0	
chr3	17789054	17789234	reg1034737.p1	3.708	+	TSC_hg19_v1_chr3_-_17784106 NM_001134380	-4977	-	D86965 NM_014744	-6746	-	AK310539 NM_001134381	-47633	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	677653	-	BC001744 NM_001131010	691089	-	AK295633 AY053503 NM_144633 AB209053 AK309034	1400860	+	NM_001134380|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8	0.0	
chr3	4544921	4545056	reg1043126.p1	3.708	+	TSC_hg19_v1_chr3_+_4535164 BC144563	-9792	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	-9860	+	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	-9957	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	476128	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	476193	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	476366	+	BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40	0.0	
chr4	119598223	119598299	reg1034389.p1	3.708	+	TSC_hg19_v1_chr4_+_119512929 AK024248	-85327	+	TSC_hg19_v1_chr4_-_119273910 AJ001531 BC007761 NM_003619	-324336	-	TSC_hg19_v1_chr4_+_119199912 BC017993 BC039555	-398344	+	TSC_hg19_v1_chr4_+_119606557 AK055555 AB046847 BC006565 BC007449 NM_020961 AB384254 CU675451	8350	+	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	158966	-	TSC_hg19_v1_chr4_-_119757290 NM_014822	159080	-	AK024248|LOC729218|729218|uncharacterized LOC729218##AJ001531|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC007761|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##NM_003619|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC017993|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##BC039555|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##AK055555|METTL14|57721|methyltransferase like 14##AB046847|METTL14|57721|methyltransferase like 14##BC006565|METTL14|57721|methyltransferase like 14##BC007449|METTL14|57721|methyltransferase like 14##NM_020961|METTL14|57721|methyltransferase like 14##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##NM_014822|SEC24D|9871|SEC24 family, member D (S. cerevisiae)	0.0	
chr6	105943663	105943843	reg1031353.p2	3.708	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-92758	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-92795	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-92907	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	590443	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	590482	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	603051	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.0	
chrY	1570212	1570347	reg1037594.p2	3.708	+	AK301844 NM_001173473	-47628	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-48478	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-109310	-	BC043610 GQ280263 NM_178129 AK126147	35759	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	90250	+	NM_004043 U11090	94068	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr10	105532222	105532382	reg1040580.p1	3.707	+	TSC_hg19_v1_chr10_-_105452931 AK294736 AK295314 AK315983 AK295660	-79352	-	TSC_hg19_v1_chr10_-_105437934 AK304828	-94381	-	TSC_hg19_v1_chr10_-_105421464 AK294454	-110853	-	TSC_hg19_v1_chr10_-_105615306 NM_014631	82968	-	TSC_hg19_v1_chr10_-_105677943 BC017400	145627	-	TSC_hg19_v1_chr10_-_105677986 NM_024928	145713	-	AK294736|SH3PXD2A|9644|SH3 and PX domains 2A##AK295314|SH3PXD2A|9644|SH3 and PX domains 2A##AK315983|SH3PXD2A|9644|SH3 and PX domains 2A##AK295660|SH3PXD2A|9644|SH3 and PX domains 2A##AK304828|SH3PXD2A|9644|SH3 and PX domains 2A##AK294454|SH3PXD2A|9644|SH3 and PX domains 2A##NM_014631|SH3PXD2A|9644|SH3 and PX domains 2A##BC017400|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1##NM_024928|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1	0.0	
chr11	131262567	131262664	reg1029446.p1	3.707	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-22146	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-476227	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-476270	-	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	518009	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	518724	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	1550399	-	NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.179636	
chr12	94602254	94602435	reg1034558.p2	3.707	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	-59840	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-531161	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-636743	-	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	251187	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	251298	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	251388	-	AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41	0.0	
chr13	103208432	103208562	reg1030434.p1	3.707	+	AB590819 BC100920 BC100921 BC100922 AY188178 NM_175929	-154422	-	NM_004115 U66200	-639503	-	TSC_hg19_v1_chr13_+_102104985 AF072752 NM_004791 AK095875 AB008375 AK297744 BC036788 AK291340 AK308194	-1103502	+	NM_003291 TSC_hg19_v1_chr13_+_103249354 BC039905 M73047 AK304313 BC024905 CU691800	40839	+	HQ258371 NM_001010977 BC132748 BC132750	138361	-	NM_001146197	202924	-	BC100920|FGF14|2259|fibroblast growth factor 14##BC100921|FGF14|2259|fibroblast growth factor 14##BC100922|FGF14|2259|fibroblast growth factor 14##AY188178|FGF14|2259|fibroblast growth factor 14##NM_175929|FGF14|2259|fibroblast growth factor 14##NM_004115|FGF14|2259|fibroblast growth factor 14##U66200|FGF14|2259|fibroblast growth factor 14##AF072752|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_004791|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK095875|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AB008375|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK297744|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##BC036788|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK291340|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##AK308194|ITGBL1|9358|integrin, beta-like 1 (with EGF-like repeat domains)##NM_003291|TPP2|7174|tripeptidyl peptidase II##BC039905|TPP2|7174|tripeptidyl peptidase II##M73047|TPP2|7174|tripeptidyl peptidase II##AK304313|TPP2|7174|tripeptidyl peptidase II##BC024905|TPP2|7174|tripeptidyl peptidase II##HQ258371|METTL21C|196541|methyltransferase like 21C##NM_001010977|METTL21C|196541|methyltransferase like 21C##BC132748|METTL21C|196541|methyltransferase like 21C##BC132750|METTL21C|196541|methyltransferase like 21C##NM_001146197|CCDC168|643677|coiled-coil domain containing 168	0.91637	CTCF.p2:2:0.916
chr13	45451184	45451285	reg1032791.p1	3.707	+	TSC_hg19_v1_chr13_-_45150604 AB082525 NM_001243799 NM_183422	-300584	-	AK091854 AX747223 TSC_hg19_v1_chr13_-_45150467 BC136475 BC136482	-300804	-	NM_001243798	-402798	-	TSC_hg19_v1_chr13_-_45563607 AB528019 AF159548 BC001436 AK314242 NM_012345	112361	-	TSC_hg19_v1_chr13_+_45563672 AK304669 BC017776 BC039586 NM_018559 AK292493 AF145122 BC032333 AB051491	112490	+	TSC_hg19_v1_chr13_+_45694638 NM_004128 AK291545	243380	+	AB082525|TSC22D1|8848|TSC22 domain family, member 1##NM_001243799|TSC22D1|8848|TSC22 domain family, member 1##NM_183422|TSC22D1|8848|TSC22 domain family, member 1##AK091854|TSC22D1|8848|TSC22 domain family, member 1##BC136475|TSC22D1|8848|TSC22 domain family, member 1##BC136482|TSC22D1|8848|TSC22 domain family, member 1##NM_001243798|TSC22D1|8848|TSC22 domain family, member 1##AF159548|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##BC001436|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AK314242|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##NM_012345|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AK304669|KIAA1704|55425|KIAA1704##BC017776|KIAA1704|55425|KIAA1704##BC039586|KIAA1704|55425|KIAA1704##NM_018559|KIAA1704|55425|KIAA1704##AK292493|KIAA1704|55425|KIAA1704##AF145122|KIAA1704|55425|KIAA1704##BC032333|KIAA1704|55425|KIAA1704##AB051491|KIAA1704|55425|KIAA1704##NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	0.018317	
chr15	52402124	52402203	reg1029395.p2	3.707	+	TSC_hg19_v1_chr15_+_52311442 BC035492	-90702	+	TSC_hg19_v1_chr15_+_52311432 CR749401	-90729	+	TSC_hg19_v1_chr15_+_52311425 NM_002748	-90744	+	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	2783	-	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	69978	-	TSC_hg19_v1_chr15_+_52472257 AF007131	70172	+	BC035492|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##NM_002748|MAPK6|5597|mitogen-activated protein kinase 6##AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973	0.0	
chr15	58035807	58035905	reg1038049.p2	3.707	+	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	-36876	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	-36970	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	-151691	+	AB015228 AB015227 NM_170697	270383	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	322022	-	NM_001206897 NM_003888 NM_170696	322264	-	AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	0.997379	CTCF.p2:-7:0.997
chr15	65059543	65059624	reg1037398.p1	3.707	+	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	-64114	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	-64181	-	BC119629 BC119630 BC148316 BC127630 TSC_hg19_v1_chr15_-_64995360 BC127631 AF242520 AF242521	-64223	-	BC131612 BC148208 AY369207 NM_194272 TSC_hg19_v1_chr15_-_65067789 AK127873	8163	-	BC137503 BC137504 TSC_hg19_v1_chr15_-_65117814 BC018978 AK026345 EU084033 NM_025049 AB185926 AB185927	58252	-	AK311036 NM_001195059 NM_025201 TSC_hg19_v1_chr15_+_65134113 AK096203 BC008744 AF494534	74524	+	BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2##BC131612|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC148208|RBPMS2|348093|RNA binding protein with multiple splicing 2##AY369207|RBPMS2|348093|RNA binding protein with multiple splicing 2##NM_194272|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK127873|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC137503|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC137504|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC018978|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AK026345|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##EU084033|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_025049|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185926|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185927|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_001195059|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##NM_025201|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK096203|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC008744|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AF494534|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2	0.508175	CTCF.p2:3:0.508
chr1	966598	966684	reg1033686.p1	3.707	+	AF016903 U84406 TSC_hg19_v1_chr1_+_955679	-10996	+	TSC_hg19_v1_chr1_+_955536 AB385240	-11098	+	TSC_hg19_v1_chr1_+_955499 AB191264 NM_198576	-11145	+	TSC_hg19_v1_chr1_+_978666 BC084578	12081	+	TSC_hg19_v1_chr1_+_995079 AK310350	28445	+	TSC_hg19_v1_chr1_+_995109 BC033949	28471	+	AF016903|AGRN|375790|agrin##U84406|AGRN|375790|agrin##AB191264|AGRN|375790|agrin##NM_198576|AGRN|375790|agrin##BC084578|AGRN|375790|agrin##AK310350|LOC100288175|100288175|uncharacterized LOC100288175##BC033949|LOC100288175|100288175|uncharacterized LOC100288175	0.0	
chr21	43483880	43484053	reg1040012.p1	3.707	+	AB051810 AB051811 NM_001199527 NM_001199528	-899	+	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	-53495	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	-109883	-	AB096965 AY771619 AY771620 NM_001004416 NM_173568	7459	+	AF323660 NM_207627 AF323661 NM_207628	135893	+	AF323662 NM_207629	152220	+	AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2##AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1##AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323662|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207629|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	0.0	
chr2	92224328	92224434	reg1039643.p2	3.707	+	TSC_hg19_v1_chr2_-_91847997 BC030764	-376378	-	TSC_hg19_v1_chr2_+_90211706 Z69013	-2012663	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-2146627	+	AK097438 BC021716 NM_144705 AK296678 CU692394	3312869	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	3467101	+	TSC_hg19_v1_chr2_-_95787546 CU680814 DQ892620 DQ895860 AK058160 AK295812	3563161	-	AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein##DQ892620|MRPS5|64969|mitochondrial ribosomal protein S5##DQ895860|MRPS5|64969|mitochondrial ribosomal protein S5##AK058160|MRPS5|64969|mitochondrial ribosomal protein S5	0.0	
chr3	138313771	138313935	reg1007538.p2	3.707	+	TSC_hg19_v1_chr3_-_138313097 AF202146 AF289495 AK225440 AK299003 AK295866 AK294587 AK301913 BC030598 NM_024491 AK314314	-743	-	TSC_hg19_v1_chr3_+_138153427 BC037292 AK125080 AK289530	-160414	+	NM_031913 TSC_hg19_v1_chr3_+_138153418	-160437	+	AK125477 TSC_hg19_v1_chr3_+_138327450	13595	+	NM_001033030 NM_001033031 NM_001033032 TSC_hg19_v1_chr3_+_138327638 BC012478	13763	+	AK001444 NM_018147	14065	+	AF202146|CEP70|80321|centrosomal protein 70kDa##AF289495|CEP70|80321|centrosomal protein 70kDa##AK225440|CEP70|80321|centrosomal protein 70kDa##AK299003|CEP70|80321|centrosomal protein 70kDa##AK295866|CEP70|80321|centrosomal protein 70kDa##AK294587|CEP70|80321|centrosomal protein 70kDa##AK301913|CEP70|80321|centrosomal protein 70kDa##BC030598|CEP70|80321|centrosomal protein 70kDa##NM_024491|CEP70|80321|centrosomal protein 70kDa##AK314314|CEP70|80321|centrosomal protein 70kDa##BC037292|ESYT3|83850|extended synaptotagmin-like protein 3##AK125080|ESYT3|83850|extended synaptotagmin-like protein 3##AK289530|ESYT3|83850|extended synaptotagmin-like protein 3##NM_031913|ESYT3|83850|extended synaptotagmin-like protein 3##AK125477|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033030|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033031|FAIM|55179|Fas apoptotic inhibitory molecule##NM_001033032|FAIM|55179|Fas apoptotic inhibitory molecule##BC012478|FAIM|55179|Fas apoptotic inhibitory molecule##AK001444|FAIM|55179|Fas apoptotic inhibitory molecule##NM_018147|FAIM|55179|Fas apoptotic inhibitory molecule	0.0	
chr3	15826596	15826703	reg1032208.p1	3.707	+	AY367056 NM_001195099 BC035170 BC048975	-28572	-	TSC_hg19_v1_chr3_+_15643452 AK301838	-183186	+	AK297033 TSC_hg19_v1_chr3_+_15643251 NM_000060 AK313252 AK294301 U03274 BC012099 CU680214	-183401	+	TSC_hg19_v1_chr3_-_15839678 AK293770 NM_001195098	13033	-	AB002377 NM_015199 TSC_hg19_v1_chr3_-_15901096	74363	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	389545	+	AY367056|ANKRD28|23243|ankyrin repeat domain 28##NM_001195099|ANKRD28|23243|ankyrin repeat domain 28##BC035170|ANKRD28|23243|ankyrin repeat domain 28##BC048975|ANKRD28|23243|ankyrin repeat domain 28##AK301838|BTD|686|biotinidase##AK297033|BTD|686|biotinidase##NM_000060|BTD|686|biotinidase##AK313252|BTD|686|biotinidase##AK294301|BTD|686|biotinidase##U03274|BTD|686|biotinidase##BC012099|BTD|686|biotinidase##AK293770|ANKRD28|23243|ankyrin repeat domain 28##NM_001195098|ANKRD28|23243|ankyrin repeat domain 28##AB002377|ANKRD28|23243|ankyrin repeat domain 28##NM_015199|ANKRD28|23243|ankyrin repeat domain 28##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2	0.0	
chr4	154457335	154457516	reg1040569.p2	3.707	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-69933	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-191550	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-191638	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	147973	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	148005	+	TSC_hg19_v1_chr4_+_154605441 BC033756	148039	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.0	
chr6	127587641	127587771	reg1034190.p1	3.707	+	NM_032784 AF251057	-147655	+	TSC_hg19_v1_chr6_+_127439818 BC022367	-147895	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	-926436	+	NM_001242851 NM_001242844 NM_001242849 NM_001242852 TSC_hg19_v1_chr6_+_127587982 NM_001242845 NM_001242846 NM_001242850 NM_030963	198	+	TSC_hg19_v1_chr6_+_127588008 AK027558 AL136829 AX721119	300	+	AK025796 NM_001139510	75845	-	NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3##BC022367|RSPO3|84870|R-spondin 3##BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##NM_001242851|RNF146|81847|ring finger protein 146##NM_001242844|RNF146|81847|ring finger protein 146##NM_001242849|RNF146|81847|ring finger protein 146##NM_001242852|RNF146|81847|ring finger protein 146##NM_001242845|RNF146|81847|ring finger protein 146##NM_001242846|RNF146|81847|ring finger protein 146##NM_001242850|RNF146|81847|ring finger protein 146##NM_030963|RNF146|81847|ring finger protein 146##AK027558|RNF146|81847|ring finger protein 146##AL136829|RNF146|81847|ring finger protein 146##AK025796|ECHDC1|55862|enoyl CoA hydratase domain containing 1##NM_001139510|ECHDC1|55862|enoyl CoA hydratase domain containing 1	0.985826	CTCF.p2:0:0.986
chr7	44297412	44297593	reg1027464.p1	3.707	+	TSC_hg19_v1_chr7_+_44240639 BC007319 AF091079 U95735 DQ890653 DQ893833 CU675611 AB451317 AB451447 BT007078 CR456989 CR542008	-56816	+	TSC_hg19_v1_chr7_+_44240631 AK223488	-56882	+	TSC_hg19_v1_chr7_+_44240576 NM_006555 AK312622	-56924	+	AJ252238 CU676368 AM392749 AM392792 AM393562 AM393817 AF078803 AF081572 AF081924 AF083419 AF140350 AB462968 TSC_hg19_v1_chr7_-_44365233 AJ252237 AF112471 AF112472 AK222703 AK294138 AK290148 U23460 AJ252236 AK315663 BC019070 NM_001220 NM_172078 NM_172079 NM_172080 NM_172081 NM_172082 NM_172083 NM_172084	67789	-	AB028991 EU350932 TSC_hg19_v1_chr7_-_44530237 BC003691 BC035014 NM_015332	232779	-	AY437865 AY515256 FJ481111 TSC_hg19_v1_chr7_-_44580901 BC117178 BC143731 BC143756 AF192522 AF192523 NM_001101648 NM_013389	283383	-	BC007319|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AF091079|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##U95735|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ890653|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##DQ893833|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451317|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AB451447|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##BT007078|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR456989|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##CR542008|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK223488|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##NM_006555|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AK312622|YKT6|10652|YKT6 v-SNARE homolog (S. cerevisiae)##AJ252238|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392749|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM392792|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393562|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AM393817|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF078803|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081572|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF081924|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF083419|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF140350|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252237|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112471|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AF112472|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK222703|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK294138|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK290148|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##U23460|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AJ252236|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AK315663|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##BC019070|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_001220|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172078|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172079|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172080|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172081|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172082|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172083|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##NM_172084|CAMK2B|816|calcium/calmodulin-dependent protein kinase II beta##AB028991|NUDCD3|23386|NudC domain containing 3##EU350932|NUDCD3|23386|NudC domain containing 3##BC003691|NUDCD3|23386|NudC domain containing 3##BC035014|NUDCD3|23386|NudC domain containing 3##NM_015332|NUDCD3|23386|NudC domain containing 3##AY437865|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AY515256|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##FJ481111|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC117178|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143731|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##BC143756|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192522|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##AF192523|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_001101648|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1##NM_013389|NPC1L1|29881|NPC1 (Niemann-Pick disease, type C1, gene)-like 1	0.0	
chr8	84043293	84043385	reg1042049.p1	3.707	+	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	-1288866	-	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-1398580	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-1409813	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	1052120	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	1052204	+	TSC_hg19_v1_chr8_+_85095702 AK095026	1052396	+	AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like	0.0	
chr12	124961802	124961903	reg1029874.p2	3.706	+	AK126577 NM_181709	-188143	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-504123	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-504653	-	TSC_hg19_v1_chr12_-_125002875 BC033087	41007	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	90223	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	386453	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr1	234735481	234735662	reg1036576.p1	3.706	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	-120711	-	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	-226199	+	TSC_hg19_v1_chr1_+_234350005 BC037878	-385565	+	TSC_hg19_v1_chr1_-_234743489 BC020516	7955	-	TSC_hg19_v1_chr1_-_234743841 AK299768	8260	-	TSC_hg19_v1_chr1_-_234743861 AK309579	8287	-	NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##BC037878|SLC35F3|148641|solute carrier family 35, member F3##BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2	0.015715	
chr1	54220615	54220762	reg1013686.p2	3.706	+	AK090634 AX746550 NM_147193	-20812	-	AK302085 TSC_hg19_v1_chr1_+_53925533 BC029566	-295158	+	AK057273 NM_033067 AJ291671	-295581	+	DQ141696 AK302910 BX648031 TSC_hg19_v1_chr1_-_54304004 AK298909 AK295000	83286	-	AK001269 AL354612 AL354613 TSC_hg19_v1_chr1_-_54304168 BC003082 NM_001168551 NM_018087	83477	-	AL713668 TSC_hg19_v1_chr1_-_54355462 AK000823 BC064590 AK315183	134747	-	AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1##AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##DQ141696|TMEM48|55706|transmembrane protein 48##AK302910|TMEM48|55706|transmembrane protein 48##BX648031|TMEM48|55706|transmembrane protein 48##AK298909|TMEM48|55706|transmembrane protein 48##AK295000|TMEM48|55706|transmembrane protein 48##AK001269|TMEM48|55706|transmembrane protein 48##AL354612|TMEM48|55706|transmembrane protein 48##AL354613|TMEM48|55706|transmembrane protein 48##BC003082|TMEM48|55706|transmembrane protein 48##NM_001168551|TMEM48|55706|transmembrane protein 48##NM_018087|TMEM48|55706|transmembrane protein 48##AL713668|YIPF1|54432|Yip1 domain family, member 1##AK000823|YIPF1|54432|Yip1 domain family, member 1##BC064590|YIPF1|54432|Yip1 domain family, member 1##AK315183|YIPF1|54432|Yip1 domain family, member 1	0.0	
chr17	5145836	5145910	reg1035583.p2	3.706	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	-7772	-	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-50493	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-50700	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	39793	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	177052	-	AY775314 AY775315 AY775316 AY775317 AY775318 AY775319 AY775320 AY775321 AY775323 NM_001033002 NM_001160243 NM_001160244 NM_001160246 NM_001160266 NM_001160267	177087	+	DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa##AY775314|RPAIN|84268|RPA interacting protein##AY775315|RPAIN|84268|RPA interacting protein##AY775316|RPAIN|84268|RPA interacting protein##AY775317|RPAIN|84268|RPA interacting protein##AY775318|RPAIN|84268|RPA interacting protein##AY775319|RPAIN|84268|RPA interacting protein##AY775320|RPAIN|84268|RPA interacting protein##AY775321|RPAIN|84268|RPA interacting protein##AY775323|RPAIN|84268|RPA interacting protein##NM_001033002|RPAIN|84268|RPA interacting protein##NM_001160243|RPAIN|84268|RPA interacting protein##NM_001160244|RPAIN|84268|RPA interacting protein##NM_001160246|RPAIN|84268|RPA interacting protein##NM_001160266|RPAIN|84268|RPA interacting protein##NM_001160267|RPAIN|84268|RPA interacting protein	0.0	
chr17	70423494	70423616	reg1036475.p2	3.706	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-306315	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-306385	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-306396	+	AK000477 TSC_hg19_v1_chr17_-_70588944	165388	-	AF331643 TSC_hg19_v1_chr17_-_71088816	665261	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	665268	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.436459	CTCF.p2:-30:0.436
chr18	33241867	33241952	reg1037131.p1	3.706	+	NM_020474 BC047746 U41514 AB529022 X85018	-7330	+	AK095502 AK300660 BC039404 NM_001098817 NM_194281	-163984	-	BC130288 BC136314 AF492004 AF533251 AK055775 NM_145756	-284616	-	NM_001201474 NM_001201475 NM_001201476 NM_031446 BC108730 TSC_hg19_v1_chr18_+_33552656 BC119765 BC119766 AK311536 AF277182 AF277189 BC025950	310758	+	TSC_hg19_v1_chr18_-_33647515 DQ892910 EU176720 AF419845 NM_018170 BC000225 AK314569	405518	-	BC010136 TSC_hg19_v1_chr18_-_33647520	405610	-	NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##AK095502|INO80C|125476|INO80 complex subunit C##AK300660|INO80C|125476|INO80 complex subunit C##BC039404|INO80C|125476|INO80 complex subunit C##NM_001098817|INO80C|125476|INO80 complex subunit C##NM_194281|INO80C|125476|INO80 complex subunit C##BC130288|ZNF396|252884|zinc finger protein 396##BC136314|ZNF396|252884|zinc finger protein 396##AF492004|ZNF396|252884|zinc finger protein 396##AF533251|ZNF396|252884|zinc finger protein 396##AK055775|ZNF396|252884|zinc finger protein 396##NM_145756|ZNF396|252884|zinc finger protein 396##NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21##NM_031446|C18orf21|83608|chromosome 18 open reading frame 21##BC108730|C18orf21|83608|chromosome 18 open reading frame 21##BC119765|C18orf21|83608|chromosome 18 open reading frame 21##BC119766|C18orf21|83608|chromosome 18 open reading frame 21##AF277182|C18orf21|83608|chromosome 18 open reading frame 21##AF277189|C18orf21|83608|chromosome 18 open reading frame 21##BC025950|C18orf21|83608|chromosome 18 open reading frame 21##DQ892910|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##EU176720|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AF419845|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##NM_018170|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC000225|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK314569|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC010136|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A	0.248529	CTCF.p2:-8:0.249
chr20	46067763	46067905	reg1030373.p1	3.706	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-82346	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-91187	-	TSC_hg19_v1_chr20_-_45927496 BC030721	-140265	-	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	62788	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	62850	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	346918	-	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2	0.036827	
chr21	42741874	42741965	reg1025079.p2	3.706	+	TSC_hg19_v1_chr21_+_42733956 M30818 NM_002463 AK308060 AK126107	-7981	+	AK125528 NM_058186 NM_206964 TSC_hg19_v1_chr21_+_42688738 BC057829 AF375989 AJ409094 AY040086 AY358459 HQ257913 AF494379	-53186	+	AK302095 BC036314 TSC_hg19_v1_chr21_+_42676236	-65713	+	TSC_hg19_v1_chr21_+_42742025 AK298780	100	+	AK096355 NM_001144925	50561	+	NM_002462 TSC_hg19_v1_chr21_+_42798165 AK225885 AK315465 NM_001178046 M33882 BC052255	56175	+	M30818|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##NM_002463|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK308060|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK126107|LOC100131190|100131190|uncharacterized LOC100131190##AK125528|FAM3B|54097|family with sequence similarity 3, member B##NM_058186|FAM3B|54097|family with sequence similarity 3, member B##NM_206964|FAM3B|54097|family with sequence similarity 3, member B##BC057829|FAM3B|54097|family with sequence similarity 3, member B##AF375989|FAM3B|54097|family with sequence similarity 3, member B##AJ409094|FAM3B|54097|family with sequence similarity 3, member B##AY040086|FAM3B|54097|family with sequence similarity 3, member B##AY358459|FAM3B|54097|family with sequence similarity 3, member B##HQ257913|FAM3B|54097|family with sequence similarity 3, member B##AF494379|FAM3B|54097|family with sequence similarity 3, member B##BC036314|FAM3B|54097|family with sequence similarity 3, member B##AK298780|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK096355|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001144925|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_002462|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK225885|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK315465|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001178046|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##M33882|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##BC052255|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)	0.0	
chr2	173956161	173956259	reg1036085.p1	3.706	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	-15562	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	-15664	+	AB208974 TSC_hg19_v1_chr2_+_173940455	-15762	+	TSC_hg19_v1_chr2_+_174219599 AY029179 NM_031942 NM_145810 AK027642 AK027628 BC027966 AK075134 AK297097 AK300949 AK297245 AL834186 CU693352 AB527763	263403	+	AK023489 TSC_hg19_v1_chr2_-_174767427	811144	-	X68560 TSC_hg19_v1_chr2_-_174828559 M97191	872337	-	AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AB208974|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AY029179|CDCA7|83879|cell division cycle associated 7##NM_031942|CDCA7|83879|cell division cycle associated 7##NM_145810|CDCA7|83879|cell division cycle associated 7##AK027642|CDCA7|83879|cell division cycle associated 7##AK027628|CDCA7|83879|cell division cycle associated 7##BC027966|CDCA7|83879|cell division cycle associated 7##AK075134|CDCA7|83879|cell division cycle associated 7##AK297097|CDCA7|83879|cell division cycle associated 7##AK300949|CDCA7|83879|cell division cycle associated 7##AK297245|CDCA7|83879|cell division cycle associated 7##AL834186|CDCA7|83879|cell division cycle associated 7##X68560|SP3|6670|Sp3 transcription factor##M97191|SP3|6670|Sp3 transcription factor	0.055472	
chr3	16884144	16884253	reg1038342.p2	3.706	+	U65918 U66726 U66078 BC027595 NM_001351	-237232	-	BX648638 AK303026 NM_001190811	-237928	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	-328974	-	AB029015 NM_001144382	42253	+	BC036392 NM_015184	90383	+	AK310539 NM_001134381	857313	-	U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5	0.0	
chr4	185455922	185456041	reg1028478.p2	3.706	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	-60300	-	BC035035 AY358676 AK057370 NM_153343	-316916	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-628070	+	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	114620	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	114852	+	TSC_hg19_v1_chr4_+_185570923 BC064600 AK307317	114948	+	X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111##BC064600|CCDC111|201973|coiled-coil domain containing 111##AK307317|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr6	149350273	149350360	reg1007782.p2	3.706	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-282107	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-686125	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-686326	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	288787	+	AK315038 NM_015093 AK307650	289125	+	AY340238 NM_001002255 BC130305 HQ258040	371192	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr7	105318416	105318501	reg1035732.p1	3.706	+	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	-96523	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	-145812	+	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	-155797	-	AK300338 NM_138495	1150	-	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	198527	-	TSC_hg19_v1_chr7_+_105517250 AK125261	198806	+	BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##AK125261|CDHR3|222256|cadherin-related family member 3	0.0	
chr7	106300974	106301054	reg1004144.p3	3.706	+	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	-375491	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	-375652	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	-547999	-	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	489	-	TSC_hg19_v1_chr7_+_106505701 AK292684	204699	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	204760	+	BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1##AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74##AK292684|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide	0.714771	CTCF.p2:-64:0.715
chr10	31039826	31040006	reg1007297.p1	3.705	+	AF139543 BC066294 NM_183058	-121281	-	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-316795	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-316977	+	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	248536	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	280905	-	TSC_hg19_v1_chr10_+_31607451 BX647794	567520	+	AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1	0.0	
chr10	49906567	49906682	reg1028134.p1	3.705	+	AK127650 NM_020945	-13109	+	TSC_hg19_v1_chr10_+_49892917 BC034937	-13734	+	TSC_hg19_v1_chr10_-_49864302 AK055937	-42319	-	NM_001006939 BC036722	215656	-	TSC_hg19_v1_chr10_-_50323537 BC041414 AK297931 AK056299 NM_001031746 NM_144984	416899	-	BC029839 BC047597 NM_001164484	435434	-	AK127650|WDFY4|57705|WDFY family member 4##NM_020945|WDFY4|57705|WDFY family member 4##BC034937|WDFY4|57705|WDFY family member 4##AK055937|ARHGAP22|58504|Rho GTPase activating protein 22##NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18##BC041414|VSTM4|196740|V-set and transmembrane domain containing 4##AK297931|VSTM4|196740|V-set and transmembrane domain containing 4##AK056299|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001031746|VSTM4|196740|V-set and transmembrane domain containing 4##NM_144984|VSTM4|196740|V-set and transmembrane domain containing 4##BC029839|FAM170B|170370|family with sequence similarity 170, member B##BC047597|FAM170B|170370|family with sequence similarity 170, member B##NM_001164484|FAM170B|170370|family with sequence similarity 170, member B	0.0	
chr11	32334564	32334685	reg1037247.p2	3.705	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	-221925	+	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	-222147	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-495146	-	AK093168 BC032861 NM_001198551 NM_001198552	117736	-	TSC_hg19_v1_chr11_-_32456950 BC046461	122315	-	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	122445	-	BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1##BC046461|WT1|7490|Wilms tumor 1##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1	1.041904	CTCF.p2:-26:0.989
chr13	30767729	30767906	reg1033048.p1	3.705	+	TSC_hg19_v1_chr13_-_30424811 NM_007106	-342976	-	TSC_hg19_v1_chr13_-_30424719 AK056580	-343115	-	BC059385 BC044582 TSC_hg19_v1_chr13_-_30424481	-343411	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	113334	-	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	113752	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	272176	-	NM_007106|UBL3|5412|ubiquitin-like 3##AK056580|UBL3|5412|ubiquitin-like 3##BC059385|UBL3|5412|ubiquitin-like 3##BC044582|UBL3|5412|ubiquitin-like 3##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1	0.0	
chr13	50601401	50601581	reg1038605.p2	3.705	+	AY169387 AY169388 NM_173605 NM_199464 AK313401 AY129654 AY129653 BC020887 BC032343 AY190921 AY190922 AL832695 CU689344 DQ891601 DQ894796	-11982	+	TSC_hg19_v1_chr13_+_50571212 NM_001007278 NM_005798 NM_052811 NM_213590 AY455758 AY764035 AK314496 AF241850 BC029514 AY191002 BC003579 BC063407 AF220127 AL360196	-30311	+	TSC_hg19_v1_chr13_-_50510444 AF052154 AF055016 BC022519 AK316576 BC007076 AK308818 AF334405 AK290576 NM_001127482 NM_020456	-90974	-	TSC_hg19_v1_chr13_-_50656128 BC038090 AF264787 Y15228 BC022349 BC006995 BC026275 BC030971 BC070292 BC055417 BC017819 BC022282	54658	-	AJ412023 AJ412024 AJ412025 AJ412026 AJ412038 AJ412039 AJ412054 AJ412055 AJ412056 AJ412057 AJ412058 AJ412059 AJ412060 AJ412061 AJ412062 Y15227 TSC_hg19_v1_chr13_+_50656364 BC004131 AK312167 BC020692 AK095311	54854	+	TSC_hg19_v1_chr13_-_50699781 AF380424	98324	-	AY169387|KCNRG|283518|potassium channel regulator##AY169388|KCNRG|283518|potassium channel regulator##NM_173605|KCNRG|283518|potassium channel regulator##NM_199464|KCNRG|283518|potassium channel regulator##AK313401|KCNRG|283518|potassium channel regulator##AY129654|KCNRG|283518|potassium channel regulator##AY129653|KCNRG|283518|potassium channel regulator##BC020887|KCNRG|283518|potassium channel regulator##BC032343|KCNRG|283518|potassium channel regulator##AY190921|KCNRG|283518|potassium channel regulator##AY190922|KCNRG|283518|potassium channel regulator##AL832695|TRIM13|10206|tripartite motif containing 13##DQ891601|KCNRG|283518|potassium channel regulator##DQ894796|KCNRG|283518|potassium channel regulator##NM_001007278|TRIM13|10206|tripartite motif containing 13##NM_005798|TRIM13|10206|tripartite motif containing 13##NM_052811|TRIM13|10206|tripartite motif containing 13##NM_213590|TRIM13|10206|tripartite motif containing 13##AY455758|TRIM13|10206|tripartite motif containing 13##AY764035|TRIM13|10206|tripartite motif containing 13##AK314496|TRIM13|10206|tripartite motif containing 13##AF241850|TRIM13|10206|tripartite motif containing 13##BC029514|TRIM13|10206|tripartite motif containing 13##AY191002|TRIM13|10206|tripartite motif containing 13##BC003579|TRIM13|10206|tripartite motif containing 13##BC063407|TRIM13|10206|tripartite motif containing 13##AF220127|TRIM13|10206|tripartite motif containing 13##AL360196|TRIM13|10206|tripartite motif containing 13##AF052154|SPRYD7|57213|SPRY domain containing 7##AF055016|SPRYD7|57213|SPRY domain containing 7##BC022519|SPRYD7|57213|SPRY domain containing 7##AK316576|SPRYD7|57213|SPRY domain containing 7##BC007076|SPRYD7|57213|SPRY domain containing 7##AK308818|SPRYD7|57213|SPRY domain containing 7##AF334405|SPRYD7|57213|SPRY domain containing 7##AK290576|SPRYD7|57213|SPRY domain containing 7##NM_001127482|SPRYD7|57213|SPRY domain containing 7##NM_020456|SPRYD7|57213|SPRY domain containing 7##BC038090|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AF264787|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##Y15228|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##BC070292|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##BC055417|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AJ412023|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412024|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412061|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412062|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##Y15227|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC020692|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AK095311|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)	0.0	
chr15	31638721	31638829	reg1035761.p1	3.705	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-19437	+	NM_001243538	-115726	-	GQ502181 HM135791 NM_001252020	-185347	-	AJ430383 NM_130901	308766	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	524054	-	TSC_hg19_v1_chr15_-_32162898 AK126002	524168	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr15	40565032	40565130	reg1039228.p1	3.705	+	TSC_hg19_v1_chr15_+_40545348 BC035596	-19715	+	AK095915 NM_001039905 BC171826	-19942	-	NM_020168 AJ236915	-33028	+	NM_001190479	9705	-	BT006905 CU674468 TSC_hg19_v1_chr15_-_40599904 AB209583	34815	-	TSC_hg19_v1_chr15_-_40599986 BC000939	34910	-	BC035596|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AK095915|C15orf56|644809|chromosome 15 open reading frame 56##NM_001039905|C15orf56|644809|chromosome 15 open reading frame 56##NM_020168|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##AJ236915|PAK6|56924|p21 protein (Cdc42/Rac)-activated kinase 6##NM_001190479|ANKRD63|100131244|ankyrin repeat domain 63##BT006905|PLCB2|5330|phospholipase C, beta 2##AB209583|PLCB2|5330|phospholipase C, beta 2##BC000939|PLCB2|5330|phospholipase C, beta 2	0.900426	CTCF.p2:-15:0.900
chr16	3174382	3174563	reg1023699.p3	3.705	+	TSC_hg19_v1_chr16_+_3162586 NM_001042428 NM_003456 AK313009 AF060865 BC002810	-11877	+	TSC_hg19_v1_chr16_-_3149286 AK074736	-25190	-	BC114452 AK027455 NM_032805	-31623	-	TSC_hg19_v1_chr16_-_3184862 AF098968	10399	-	AF017433 TSC_hg19_v1_chr16_+_3184980	10480	+	TSC_hg19_v1_chr16_+_3185058 NM_004220	10580	+	NM_001042428|ZNF205|7755|zinc finger protein 205##NM_003456|ZNF205|7755|zinc finger protein 205##AK313009|ZNF205|7755|zinc finger protein 205##AF060865|ZNF205|7755|zinc finger protein 205##BC002810|ZNF205|7755|zinc finger protein 205##AK074736|ZSCAN10|84891|zinc finger and SCAN domain containing 10##BC114452|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AK027455|ZSCAN10|84891|zinc finger and SCAN domain containing 10##NM_032805|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AF017433|ZNF213|7760|zinc finger protein 213##NM_004220|ZNF213|7760|zinc finger protein 213	0.0	
chr19	14887347	14887511	reg1036997.p2	3.705	+	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	-86665	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	-101752	-	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	-193515	+	BC082991 AF114491 AK301458 AK222891 AK298700 TSC_hg19_v1_chr19_-_14887654	209	-	TSC_hg19_v1_chr19_-_14887656 AK291776	283	-	BC053933 BC127004 BC127005 BC034949 NM_013447 NM_152916 NM_152917 NM_152918 NM_152919 NM_152920 NM_152921	1920	-	AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##BC082991|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AF114491|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK301458|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK222891|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK298700|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK291776|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##BC053933|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##BC127004|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##BC127005|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##BC034949|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_013447|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152916|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152917|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152918|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152919|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152920|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152921|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2	0.0	
chr19	15408534	15408640	reg1036012.p2	3.705	+	AF386649 NM_014299 NM_058243 Y12059	-17326	-	BC115002 NM_001142886	-64775	-	BC132958 BC132960 AK026061 NM_024794	-65375	-	TSC_hg19_v1_chr19_-_15442714 BC030158 AK307664	34115	-	BC000156 TSC_hg19_v1_chr19_-_15443139	34551	-	TSC_hg19_v1_chr19_-_15443306 BC038988	34718	-	AF386649|BRD4|23476|bromodomain containing 4##NM_014299|BRD4|23476|bromodomain containing 4##NM_058243|BRD4|23476|bromodomain containing 4##Y12059|BRD4|23476|bromodomain containing 4##BC115002|EPHX3|79852|epoxide hydrolase 3##NM_001142886|EPHX3|79852|epoxide hydrolase 3##BC132958|EPHX3|79852|epoxide hydrolase 3##BC132960|EPHX3|79852|epoxide hydrolase 3##AK026061|EPHX3|79852|epoxide hydrolase 3##NM_024794|EPHX3|79852|epoxide hydrolase 3##BC030158|BRD4|23476|bromodomain containing 4##AK307664|BRD4|23476|bromodomain containing 4##BC000156|BRD4|23476|bromodomain containing 4##BC038988|BRD4|23476|bromodomain containing 4	0.393306	CTCF.p2:-77:0.393
chr20	13878781	13878901	reg1038165.p1	3.705	+	TSC_hg19_v1_chr20_+_13765698 NM_001039375 NM_024120 AK289781 AK091060 AX746757 BC073158 CU687252 BC005984	-113088	+	TSC_hg19_v1_chr20_-_13765553 AK000375 NM_016649 BC104663 AK022369 BC062214	-113300	-	TSC_hg19_v1_chr20_-_13619576 BC025266 AK316311 AK299940 AK304488 NM_017714	-259277	-	BC035741 AK302170 NM_025229	92417	-	AK131348 TSC_hg19_v1_chr20_+_13976161 NM_080676	97265	+	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	97495	+	NM_001039375|C20orf7|79133|chromosome 20 open reading frame 7##NM_024120|C20orf7|79133|chromosome 20 open reading frame 7##AK289781|C20orf7|79133|chromosome 20 open reading frame 7##AK091060|C20orf7|79133|chromosome 20 open reading frame 7##BC073158|C20orf7|79133|chromosome 20 open reading frame 7##BC005984|C20orf7|79133|chromosome 20 open reading frame 7##AK000375|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##NM_016649|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC104663|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##AK022369|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC062214|ESF1|51575|ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae)##BC025266|TASP1|55617|taspase, threonine aspartase, 1##AK316311|TASP1|55617|taspase, threonine aspartase, 1##AK299940|TASP1|55617|taspase, threonine aspartase, 1##AK304488|TASP1|55617|taspase, threonine aspartase, 1##NM_017714|TASP1|55617|taspase, threonine aspartase, 1##BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AK131348|MACROD2|140733|MACRO domain containing 2##NM_080676|MACROD2|140733|MACRO domain containing 2##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2	0.84018	CTCF.p2:-6:0.840
chr20	61583812	61583914	reg1037213.p1	3.705	+	TSC_hg19_v1_chr20_+_61569501 NM_017896 BC032120 AK299509 AK000609	-14407	+	TSC_hg19_v1_chr20_-_61569265 NM_022105 NM_033081 NM_080797	-14578	-	TSC_hg19_v1_chr20_-_61569254 BC004237 AB002331 AK002127	-14621	-	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	167	+	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	262	+	BC137288 BC137308 NM_080606	54523	-	NM_017896|C20orf11|54994|chromosome 20 open reading frame 11##BC032120|C20orf11|54994|chromosome 20 open reading frame 11##AK299509|C20orf11|54994|chromosome 20 open reading frame 11##AK000609|C20orf11|54994|chromosome 20 open reading frame 11##NM_022105|DIDO1|11083|death inducer-obliterator 1##NM_033081|DIDO1|11083|death inducer-obliterator 1##NM_080797|DIDO1|11083|death inducer-obliterator 1##BC004237|DIDO1|11083|death inducer-obliterator 1##AB002331|DIDO1|11083|death inducer-obliterator 1##AK002127|DIDO1|11083|death inducer-obliterator 1##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23	0.173063	
chr20	62666431	62666605	reg1030580.p1	3.705	+	TSC_hg19_v1_chr20_+_62612576 AB527848	-53932	+	AF221842 TSC_hg19_v1_chr20_+_62612506 AF026031 AK314310 AB019219 BC001666	-53987	+	TSC_hg19_v1_chr20_+_62612487 AK225993 AK001554	-54041	+	AJ243896 AF270652 BC111390 NM_018419 BC035513 BC038590 BC073971 TSC_hg19_v1_chr20_-_62680993 AB033888	14420	-	NM_198723	21920	+	NM_003195	27491	+	AF221842|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF026031|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK314310|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AB019219|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##BC001666|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK225993|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK001554|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AJ243896|SOX18|54345|SRY (sex determining region Y)-box 18##AF270652|SOX18|54345|SRY (sex determining region Y)-box 18##BC111390|SOX18|54345|SRY (sex determining region Y)-box 18##NM_018419|SOX18|54345|SRY (sex determining region Y)-box 18##BC035513|SOX18|54345|SRY (sex determining region Y)-box 18##BC038590|SOX18|54345|SRY (sex determining region Y)-box 18##BC073971|SOX18|54345|SRY (sex determining region Y)-box 18##AB033888|SOX18|54345|SRY (sex determining region Y)-box 18##NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2	0.0	
chrX	46414732	46414913	reg1008824.p2	3.705	+	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	-9878	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	-9966	-	NM_001129898 NM_001129899 NM_001129900 NM_017776 TSC_hg19_v1_chrX_+_46306706 AK289703 AK096413 AK000351	-108111	+	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	18456	+	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	203707	-	TSC_hg19_v1_chrX_-_46618608 BC094742	203808	-	BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##NM_001129898|ZNF673|55634|zinc finger family member 673##NM_001129899|ZNF673|55634|zinc finger family member 673##NM_001129900|ZNF673|55634|zinc finger family member 673##NM_017776|ZNF673|55634|zinc finger family member 673##AK289703|ZNF673|55634|zinc finger family member 673##AK096413|ZNF673|55634|zinc finger family member 673##AK000351|ZNF673|55634|zinc finger family member 673##NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##BC094742|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7	0.0	
chr10	72379160	72379285	reg1030667.p1	3.704	+	BC063043 TSC_hg19_v1_chr10_-_72362518 FJ555237 NM_001083116 NM_005041	-16696	-	BC047695 TSC_hg19_v1_chr10_-_72362497 AK312754	-16753	-	TSC_hg19_v1_chr10_+_72238575 NM_014431 AB033100 BC136375 BC136376	-140607	+	AB462932 AF358666 AJ345098 NM_080722 NM_139155	53335	+	BC060774 BC139728 BC137543 BC137544 BC144692 BC144694 BC144695 AK057382 NM_152710	165911	-	TSC_hg19_v1_chr10_+_72575685 NM_003901 BC052991 BC051238 BC068061	196447	+	BC063043|PRF1|5551|perforin 1 (pore forming protein)##FJ555237|PRF1|5551|perforin 1 (pore forming protein)##NM_001083116|PRF1|5551|perforin 1 (pore forming protein)##NM_005041|PRF1|5551|perforin 1 (pore forming protein)##BC047695|PRF1|5551|perforin 1 (pore forming protein)##AK312754|PRF1|5551|perforin 1 (pore forming protein)##NM_014431|KIAA1274|27143|KIAA1274##AB033100|KIAA1274|27143|KIAA1274##BC136375|KIAA1274|27143|KIAA1274##BC136376|KIAA1274|27143|KIAA1274##AF358666|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##AJ345098|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_080722|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_139155|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##BC060774|C10orf27|219793|chromosome 10 open reading frame 27##BC139728|C10orf27|219793|chromosome 10 open reading frame 27##BC137543|C10orf27|219793|chromosome 10 open reading frame 27##BC137544|C10orf27|219793|chromosome 10 open reading frame 27##BC144692|C10orf27|219793|chromosome 10 open reading frame 27##BC144694|C10orf27|219793|chromosome 10 open reading frame 27##BC144695|C10orf27|219793|chromosome 10 open reading frame 27##AK057382|C10orf27|219793|chromosome 10 open reading frame 27##NM_152710|C10orf27|219793|chromosome 10 open reading frame 27##NM_003901|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC052991|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC051238|SGPL1|8879|sphingosine-1-phosphate lyase 1##BC068061|SGPL1|8879|sphingosine-1-phosphate lyase 1	0.160795	
chr11	37123030	37123140	reg1028734.p1	3.704	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-503283	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-506981	+	NM_000448 M29474	-533517	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	3191509	-	AB046800 NM_020929	3192578	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	6210433	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.0	
chr17	10199392	10199503	reg1009499.p2	3.704	+	TSC_hg19_v1_chr17_-_10101924 AY327406 NM_201433	-97541	-	TSC_hg19_v1_chr17_-_9940004 AK057761 BC006454 NM_201432	-259414	-	TSC_hg19_v1_chr17_-_9939883 AK292987	-259569	-	AF111782 NM_003802	76874	-	AK303395 NM_002472	125819	-	AF111783 NM_017533	173428	-	AY327406|GAS7|8522|growth arrest-specific 7##NM_201433|GAS7|8522|growth arrest-specific 7##AK057761|GAS7|8522|growth arrest-specific 7##BC006454|GAS7|8522|growth arrest-specific 7##NM_201432|GAS7|8522|growth arrest-specific 7##AK292987|GAS7|8522|growth arrest-specific 7##AF111782|MYH13|8735|myosin, heavy chain 13, skeletal muscle##NM_003802|MYH13|8735|myosin, heavy chain 13, skeletal muscle##AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##AF111783|MYH4|4622|myosin, heavy chain 4, skeletal muscle##NM_017533|MYH4|4622|myosin, heavy chain 4, skeletal muscle	0.0	
chr17	67231475	67231655	reg1002084.p1	3.704	+	BC125231 BC125232 AY028898 NM_080284 TSC_hg19_v1_chr17_-_67138037 BC070125 AK308431 BC029852	-93490	-	BC062472 AK057068 AY028899 NM_080283	-174475	-	BC130280 BC143971 BC143972 AK304286 BC010392 AB020629 BC047765 BC094689 AK304360 AK295876 BC037309 BC024003 NM_007168	-280109	-	AY028900 NM_080282 AY247065	9405	-	AK096664 NM_018672	80208	-	TSC_hg19_v1_chr17_-_67323275 BC029426 AJ512612 AJ275973 AK292592 NM_172232	91724	-	BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AY028900|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##NM_080282|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##AY247065|ABCA10|10349|ATP-binding cassette, sub-family A (ABC1), member 10##AK096664|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_018672|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##BC029426|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ512612|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AJ275973|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##AK292592|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5##NM_172232|ABCA5|23461|ATP-binding cassette, sub-family A (ABC1), member 5	0.0	
chr2	43629225	43629327	reg1031042.p1	3.704	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-175534	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-175546	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-175931	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	193872	-	TSC_hg19_v1_chr2_+_43864411 BC063310	235137	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	235163	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.0	
chr4	59114119	59114227	reg1043866.p2	3.704	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-1137605	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-1137641	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-1137774	-	TSC_hg19_v1_chr4_+_62066948 AK309793	2952802	+	NM_015236	3248665	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	6160923	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.399881	CTCF.p2:-13:0.400
chr6	138191994	138192174	reg1032747.p1	3.704	+	TSC_hg19_v1_chr6_-_138189314 AK124173	-2734	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-3547	+	BC051352 AK096362 NM_175747	-376559	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	236484	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	291052	+	BC069109 NM_021635 AF189269 AF189270	347542	-	AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1	0.0	
chr6	52360758	52360896	reg1037618.p2	3.704	+	AK297632 NM_001172420	-75023	+	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	-75749	+	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	-133870	+	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	80931	-	TSC_hg19_v1_chr6_-_52441859 AK291751 AB621814 BC028121 NM_012288	81024	-	AK095117 TSC_hg19_v1_chr6_+_52442225	81347	+	AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2##AK291751|TRAM2|9697|translocation associated membrane protein 2##BC028121|TRAM2|9697|translocation associated membrane protein 2##NM_012288|TRAM2|9697|translocation associated membrane protein 2##AK095117|FLJ37798|401264|uncharacterized LOC401264	0.203381	CTCF.p2:2:0.203
chr7	128809693	128809812	reg1034751.p1	3.704	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-114547	-	TSC_hg19_v1_chr7_-_128695168 BC009923	-114604	-	AJ133769 AF145029 TSC_hg19_v1_chr7_-_128694965 AK312580 BC068530	-114857	-	BC009989 NM_005631	18960	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	55077	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	198234	+	AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3##AJ133769|TNPO3|23534|transportin 3##AF145029|TNPO3|23534|transportin 3##AK312580|TNPO3|23534|transportin 3##BC068530|TNPO3|23534|transportin 3##BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2	0.0	
chr8	8499125	8499305	reg1034804.p2	3.704	+	AK122582 NM_001080826	-259993	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-323327	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-413073	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	60483	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	251723	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	361150	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.0	
chrX	112503821	112503918	reg1040617.p1	3.704	+	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	-419807	-	AB384557 AY987378 NM_001113490	-437516	-	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	-580530	-	NM_000868 U49516 BC028688 AK295753 TSC_hg19_v1_chrX_+_113818558 M81778	1314703	+	X95302 AK308523 GQ494004 U70981 AK291957 NM_000640 Y08768 AK309444	1748305	-	NM_001145346 AK301904	1920106	+	AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2##GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2##U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2##Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_001145346|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##AK301904|RBMXL3|139804|RNA binding motif protein, X-linked-like 3	0.917033	CTCF.p2:-3:0.917
chr11	3498505	3498653	reg1040239.p1	3.703	+	BC121028 BC121029 AF003540 TSC_hg19_v1_chr11_-_3400362 AK308209 AL833722 AK290099 AK308068 AK131296 AK095720 AK293679 AK308024 NM_001130519 NM_001130520 NM_001242841 NM_001242842 NM_001242843 NM_007152	-98200	-	AK293940 NM_001039165	-244964	-	AB529240 AY255583 NM_001164377	-258537	-	NM_053017 NM_001079536 Y16835	164935	-	BC017828 BC069102 NM_004314 S74683 BC111729	167791	+	AB528800 AJ278118 AJ295237 BC136250 BC143303 AF199235 NM_020402	193999	-	BC121028|ZNF195|7748|zinc finger protein 195##BC121029|ZNF195|7748|zinc finger protein 195##AF003540|ZNF195|7748|zinc finger protein 195##AK308209|ZNF195|7748|zinc finger protein 195##AL833722|ZNF195|7748|zinc finger protein 195##AK290099|ZNF195|7748|zinc finger protein 195##AK308068|ZNF195|7748|zinc finger protein 195##AK131296|ZNF195|7748|zinc finger protein 195##AK095720|ZNF195|7748|zinc finger protein 195##AK293679|ZNF195|7748|zinc finger protein 195##AK308024|ZNF195|7748|zinc finger protein 195##NM_001130519|ZNF195|7748|zinc finger protein 195##NM_001130520|ZNF195|7748|zinc finger protein 195##NM_001242841|ZNF195|7748|zinc finger protein 195##NM_001242842|ZNF195|7748|zinc finger protein 195##NM_001242843|ZNF195|7748|zinc finger protein 195##NM_007152|ZNF195|7748|zinc finger protein 195##AK293940|MRGPRE|116534|MAS-related GPR, member E##NM_001039165|MRGPRE|116534|MAS-related GPR, member E##AY255583|MRGPRG|386746|MAS-related GPR, member G##NM_001164377|MRGPRG|386746|MAS-related GPR, member G##NM_053017|ART5|116969|ADP-ribosyltransferase 5##NM_001079536|ART5|116969|ADP-ribosyltransferase 5##Y16835|ART5|116969|ADP-ribosyltransferase 5##BC017828|ART1|417|ADP-ribosyltransferase 1##BC069102|ART1|417|ADP-ribosyltransferase 1##NM_004314|ART1|417|ADP-ribosyltransferase 1##S74683|ART1|417|ADP-ribosyltransferase 1##BC111729|ART1|417|ADP-ribosyltransferase 1##AJ278118|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AJ295237|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC136250|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##BC143303|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##AF199235|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10##NM_020402|CHRNA10|57053|cholinergic receptor, nicotinic, alpha 10	0.855412	CTCF.p2:5:0.855	CTCF.p2:108:0.740
chr11	67255562	67255742	reg1032287.p2	3.703	+	TSC_hg19_v1_chr11_+_67250595 BC104797 BC104827 U31913 AB529203 EU446613	-5040	+	NM_003977 TSC_hg19_v1_chr11_+_67250510 U78521	-5140	+	AK310743 TSC_hg19_v1_chr11_-_67236717 AK296988 AY007143 BC013883 BC051854 BC125134 AK303342 NM_001078650 NM_001078651 NM_025124 AK025402	-18951	-	X98654 TSC_hg19_v1_chr11_-_67271900	16222	-	TSC_hg19_v1_chr11_-_67272835 AF334584 BC022230 NM_001130848 NM_004910	17181	-	TSC_hg19_v1_chr11_-_67275634 BT006909 CR457050 CR542042 AK310197 AK001498 BC016704 AF089814	19981	-	BC104797|AIP|9049|aryl hydrocarbon receptor interacting protein##BC104827|AIP|9049|aryl hydrocarbon receptor interacting protein##U31913|AIP|9049|aryl hydrocarbon receptor interacting protein##EU446613|AIP|9049|aryl hydrocarbon receptor interacting protein##NM_003977|AIP|9049|aryl hydrocarbon receptor interacting protein##U78521|AIP|9049|aryl hydrocarbon receptor interacting protein##AK310743|TMEM134|80194|transmembrane protein 134##AK296988|TMEM134|80194|transmembrane protein 134##AY007143|TMEM134|80194|transmembrane protein 134##BC013883|TMEM134|80194|transmembrane protein 134##BC051854|TMEM134|80194|transmembrane protein 134##BC125134|TMEM134|80194|transmembrane protein 134##AK303342|TMEM134|80194|transmembrane protein 134##NM_001078650|TMEM134|80194|transmembrane protein 134##NM_001078651|TMEM134|80194|transmembrane protein 134##NM_025124|TMEM134|80194|transmembrane protein 134##AK025402|TMEM134|80194|transmembrane protein 134##X98654|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##AF334584|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##BC022230|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##NM_001130848|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##NM_004910|PITPNM1|9600|phosphatidylinositol transfer protein, membrane-associated 1##BT006909|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR457050|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##CR542042|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK310197|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AK001498|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##BC016704|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2##AF089814|CDK2AP2|10263|cyclin-dependent kinase 2 associated protein 2	0.0	
chr17	26566158	26566262	reg1040654.p1	3.703	+	AB384832 AK024686 TSC_hg19_v1_chr17_+_26370066	-196209	+	TSC_hg19_v1_chr17_+_26369661 AK315315 AF197898 NM_016231 AF180819	-196557	+	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	-345819	-	NM_014573 TSC_hg19_v1_chr17_+_26646214 L19183 AK299511 AK307678 BC017362 BC091504 AK293331	79983	+	TSC_hg19_v1_chr17_-_26662482 AY224601 BC038094 AK297769 BC002640 NM_174887 AK309232	96276	-	NM_021137 TSC_hg19_v1_chr17_+_26662786 BC003694 AK300584 AK312387 BC001643 BC001949 BC006208 M80783	96493	+	AK024686|NLK|51701|nemo-like kinase##AK315315|NLK|51701|nemo-like kinase##AF197898|NLK|51701|nemo-like kinase##NM_016231|NLK|51701|nemo-like kinase##AF180819|NLK|51701|nemo-like kinase##AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108##NM_014573|TMEM97|27346|transmembrane protein 97##L19183|TMEM97|27346|transmembrane protein 97##AK299511|TMEM97|27346|transmembrane protein 97##AK307678|TMEM97|27346|transmembrane protein 97##BC017362|TMEM97|27346|transmembrane protein 97##BC091504|TMEM97|27346|transmembrane protein 97##AK293331|TMEM97|27346|transmembrane protein 97##AY224601|IFT20|90410|intraflagellar transport 20 homolog (Chlamydomonas)##BC038094|IFT20|90410|intraflagellar transport 20 homolog (Chlamydomonas)##BC002640|IFT20|90410|intraflagellar transport 20 homolog (Chlamydomonas)##NM_174887|IFT20|90410|intraflagellar transport 20 homolog (Chlamydomonas)##NM_021137|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##BC003694|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##AK300584|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##AK312387|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##BC001643|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##BC001949|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)##M80783|TNFAIP1|7126|tumor necrosis factor, alpha-induced protein 1 (endothelial)	0.662186	CTCF.p2:3:0.662
chr17	38255067	38255218	reg1031381.p1	3.703	+	TSC_hg19_v1_chr17_-_38252967 AY429554	-2161	-	TSC_hg19_v1_chr17_+_38230679 J03239 DQ892512 DQ895726 AB307686 AB489181 CR541915 CU674114 HQ692859	-24433	+	TSC_hg19_v1_chr17_+_38219217 BC035137 NM_001190918 NM_003250 NM_199334 X55005 BC000261 BC002728 M24899 Y00479	-35969	+	M34339 X72631 TSC_hg19_v1_chr17_-_38256833 BC047875 AK315270 AK300155 BC056148	1580	-	TSC_hg19_v1_chr17_-_38256983 M24898 NM_021724	1832	-	CR749360 TSC_hg19_v1_chr17_+_38278225	23080	+	AY429554|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##J03239|THRA|7067|thyroid hormone receptor, alpha##DQ892512|THRA|7067|thyroid hormone receptor, alpha##DQ895726|THRA|7067|thyroid hormone receptor, alpha##AB307686|THRA|7067|thyroid hormone receptor, alpha##CR541915|THRA|7067|thyroid hormone receptor, alpha##HQ692859|THRA|7067|thyroid hormone receptor, alpha##BC035137|THRA|7067|thyroid hormone receptor, alpha##NM_001190918|THRA|7067|thyroid hormone receptor, alpha##NM_003250|THRA|7067|thyroid hormone receptor, alpha##NM_199334|THRA|7067|thyroid hormone receptor, alpha##X55005|THRA|7067|thyroid hormone receptor, alpha##BC000261|THRA|7067|thyroid hormone receptor, alpha##BC002728|THRA|7067|thyroid hormone receptor, alpha##M24899|THRA|7067|thyroid hormone receptor, alpha##Y00479|THRA|7067|thyroid hormone receptor, alpha##M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##M24898|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##NM_021724|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##CR749360|MSL1|339287|male-specific lethal 1 homolog (Drosophila)	0.0	
chr17	62960041	62960154	reg1038784.p1	3.703	+	TSC_hg19_v1_chr17_-_62915587 AK294371	-44501	-	AB011135 NM_199340	-45195	-	AB384498 TSC_hg19_v1_chr17_-_62893379 BC043145 BC048966	-66706	-	TSC_hg19_v1_chr17_-_62971685 BX537538 AK056627 BC063466 AK311317	11523	-	TSC_hg19_v1_chr17_-_63009302 AK026902	49209	-	TSC_hg19_v1_chr17_-_63052724 AB528470 AF493902 CU691408 DQ893572 DQ894448 AK313672	92621	-	AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3##NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC043145|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BC048966|LRRC37A3|374819|leucine rich repeat containing 37, member A3##BX537538|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK056627|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##BC063466|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK311317|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AF493902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ893572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ894448|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AK313672|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	0.879031	CTCF.p2:-2:0.879
chr17	8025020	8025156	reg1029568.p1	3.703	+	AK296416 AK299742 NM_001165960	-2905	-	AJ269499 AK313677 NM_021628	-3256	-	AF038461 NM_001139	-34068	-	BC039887 AB049064 AB463716 NM_001165967 NM_032580	2314	-	TSC_hg19_v1_chr17_-_8055723 AB088477 AF022991 AK291061 NM_002616	30632	-	BC028207 TSC_hg19_v1_chr17_-_8059648 AK295410	34647	-	AK296416|ALOXE3|59344|arachidonate lipoxygenase 3##AK299742|ALOXE3|59344|arachidonate lipoxygenase 3##NM_001165960|ALOXE3|59344|arachidonate lipoxygenase 3##AJ269499|ALOXE3|59344|arachidonate lipoxygenase 3##AK313677|ALOXE3|59344|arachidonate lipoxygenase 3##NM_021628|ALOXE3|59344|arachidonate lipoxygenase 3##AF038461|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##NM_001139|ALOX12B|242|arachidonate 12-lipoxygenase, 12R type##BC039887|HES7|84667|hairy and enhancer of split 7 (Drosophila)##AB049064|HES7|84667|hairy and enhancer of split 7 (Drosophila)##NM_001165967|HES7|84667|hairy and enhancer of split 7 (Drosophila)##NM_032580|HES7|84667|hairy and enhancer of split 7 (Drosophila)##AB088477|PER1|5187|period homolog 1 (Drosophila)##AF022991|PER1|5187|period homolog 1 (Drosophila)##AK291061|PER1|5187|period homolog 1 (Drosophila)##NM_002616|PER1|5187|period homolog 1 (Drosophila)##BC028207|PER1|5187|period homolog 1 (Drosophila)##AK295410|PER1|5187|period homolog 1 (Drosophila)	0.039959	
chr1	8086330	8086439	reg1032645.p1	3.703	+	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	-23	-	AB528431 AJ276373 DQ892137 DQ895331 BC012839 TSC_hg19_v1_chr1_-_8075752	-10669	-	TSC_hg19_v1_chr1_+_8021770 BC008188	-64588	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	14	-	NM_001080397	298005	+	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	397633	-	AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AJ276373|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ892137|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ895331|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC012839|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC008188|PARK7|11315|parkinson protein 7##NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats	0.0	
chr2	201313874	201313945	reg1034066.p2	3.703	+	TSC_hg19_v1_chr2_+_201171424 AF193059 BC065817	-142460	+	AL110124 AY450394 AK090867 TSC_hg19_v1_chr2_+_201171276 NM_001100422 NM_001100424 AK002064 AK090703 AK314561 BC010848 BC018736 NM_001100423	-142810	+	NM_015535 AK290496	-143300	+	TSC_hg19_v1_chr2_-_201374792 BC059366 BC045189 AK290867 BC067755 AK055884 NM_152387	60923	-	TSC_hg19_v1_chr2_+_201390929 NM_001160033 NM_001160046 NM_152524 AK095291 BC048349 BC110583 BX647433 AK302457 BC092412 AY094614	76993	+	TSC_hg19_v1_chr2_+_201450590 AK301052	136678	+	AF193059|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC065817|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AL110124|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AY450394|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090867|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100422|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100424|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK002064|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK090703|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK314561|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC010848|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC018736|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_001100423|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##NM_015535|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##AK290496|SPATS2L|26010|spermatogenesis associated, serine-rich 2-like##BC059366|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC045189|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK290867|KCTD18|130535|potassium channel tetramerisation domain containing 18##BC067755|KCTD18|130535|potassium channel tetramerisation domain containing 18##AK055884|KCTD18|130535|potassium channel tetramerisation domain containing 18##NM_152387|KCTD18|130535|potassium channel tetramerisation domain containing 18##NM_001160033|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_001160046|SGOL2|151246|shugoshin-like 2 (S. pombe)##NM_152524|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK095291|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC048349|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC110583|SGOL2|151246|shugoshin-like 2 (S. pombe)##BX647433|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK302457|SGOL2|151246|shugoshin-like 2 (S. pombe)##BC092412|SGOL2|151246|shugoshin-like 2 (S. pombe)##AY094614|SGOL2|151246|shugoshin-like 2 (S. pombe)##AK301052|AOX1|316|aldehyde oxidase 1	0.0	
chr22	30685954	30686135	reg1032115.p1	3.703	+	CU013000 CU013288 CU692418 AB528172 BC021927 AK309436 AK055587 TSC_hg19_v1_chr22_-_30685566 CR456449 AK310246 NM_001037666	-494	-	CR541703 AB463155 CU013134 CU013422 DQ892537 DQ895748 CR456534 BC011589 NM_020530 TSC_hg19_v1_chr22_-_30662841	-23229	-	AB527710 X13967 BC093733 BC093735 BC143305 BC069540 TSC_hg19_v1_chr22_-_30642749 AK315310 NM_002309	-43305	-	TSC_hg19_v1_chr22_-_30722928 AB449894 AB590468 BC143051 BC143052 BC150187 CT841514 BC150214 AK127939 AF331038 BC022201 BC136815 BC171775 AK074656 BC142940 NM_001204240 NM_031937	36883	-	TSC_hg19_v1_chr22_+_30752612 BC018040 NM_001017437	66575	+	TSC_hg19_v1_chr22_-_30752874 AB463284 CU013174 CU013462 DQ892687 DQ895931 BC001976 X85237 CR456575	66768	-	CU013000|GATSL3|652968|GATS protein-like 3##CU013288|GATSL3|652968|GATS protein-like 3##BC021927|GATSL3|652968|GATS protein-like 3##AK309436|GATSL3|652968|GATS protein-like 3##AK055587|GATSL3|652968|GATS protein-like 3##CR456449|GATSL3|652968|GATS protein-like 3##AK310246|GATSL3|652968|GATS protein-like 3##NM_001037666|GATSL3|652968|GATS protein-like 3##CR541703|OSM|5008|oncostatin M##CU013134|OSM|5008|oncostatin M##CU013422|OSM|5008|oncostatin M##DQ892537|OSM|5008|oncostatin M##DQ895748|OSM|5008|oncostatin M##CR456534|OSM|5008|oncostatin M##BC011589|OSM|5008|oncostatin M##NM_020530|OSM|5008|oncostatin M##X13967|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093733|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC093735|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC143305|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##BC069540|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AK315310|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##NM_002309|LIF|3976|leukemia inhibitory factor (cholinergic differentiation factor)##AB449894|TBC1D10A|83874|TBC1 domain family, member 10A##BC143051|TBC1D10A|83874|TBC1 domain family, member 10A##BC143052|TBC1D10A|83874|TBC1 domain family, member 10A##BC150187|TBC1D10A|83874|TBC1 domain family, member 10A##CT841514|TBC1D10A|83874|TBC1 domain family, member 10A##BC150214|TBC1D10A|83874|TBC1 domain family, member 10A##AK127939|TBC1D10A|83874|TBC1 domain family, member 10A##AF331038|TBC1D10A|83874|TBC1 domain family, member 10A##BC022201|TBC1D10A|83874|TBC1 domain family, member 10A##BC136815|TBC1D10A|83874|TBC1 domain family, member 10A##BC171775|TBC1D10A|83874|TBC1 domain family, member 10A##AK074656|TBC1D10A|83874|TBC1 domain family, member 10A##BC142940|TBC1D10A|83874|TBC1 domain family, member 10A##NM_001204240|TBC1D10A|83874|TBC1 domain family, member 10A##NM_031937|TBC1D10A|83874|TBC1 domain family, member 10A##BC018040|CCDC157|550631|coiled-coil domain containing 157##NM_001017437|CCDC157|550631|coiled-coil domain containing 157##CU013174|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CU013462|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##DQ892687|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##DQ895931|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##BC001976|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##X85237|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa##CR456575|SF3A1|10291|splicing factor 3a, subunit 1, 120kDa	0.049706	
chr4	123749234	123749380	reg1026871.p2	3.703	+	TSC_hg19_v1_chr4_+_123747985 M27968	-1341	+	TSC_hg19_v1_chr4_+_123747833 J04513 NM_002006 BC111737 BC118573 BC118654	-1463	+	AK123553 NM_001178007 NM_152618 BC055426 TSC_hg19_v1_chr4_+_123653916 BX538148	-95402	+	TSC_hg19_v1_chr4_-_123843731 DQ893139 DQ896423 BC009842 AB209758 AK291871 AF019633 NM_007083	94454	-	AF019632 AK294450 NM_198041	94833	-	TSC_hg19_v1_chr4_+_123844255 NM_145207 AF361489 AL832175 AF479656 AK091384 AX746949 BC048217 AM392939 AM393832	94945	+	M27968|FGF2|2247|fibroblast growth factor 2 (basic)##J04513|FGF2|2247|fibroblast growth factor 2 (basic)##NM_002006|FGF2|2247|fibroblast growth factor 2 (basic)##BC111737|FGF2|2247|fibroblast growth factor 2 (basic)##AK123553|BBS12|166379|Bardet-Biedl syndrome 12##NM_001178007|BBS12|166379|Bardet-Biedl syndrome 12##NM_152618|BBS12|166379|Bardet-Biedl syndrome 12##BC055426|BBS12|166379|Bardet-Biedl syndrome 12##BX538148|BBS12|166379|Bardet-Biedl syndrome 12##DQ893139|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##DQ896423|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##BC009842|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AB209758|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK291871|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AF019633|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_007083|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AF019632|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##AK294450|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_198041|NUDT6|11162|nudix (nucleoside diphosphate linked moiety X)-type motif 6##NM_145207|SPATA5|166378|spermatogenesis associated 5##AF361489|SPATA5|166378|spermatogenesis associated 5##AL832175|SPATA5|166378|spermatogenesis associated 5##AF479656|SPATA5|166378|spermatogenesis associated 5##AK091384|SPATA5|166378|spermatogenesis associated 5##BC048217|SPATA5|166378|spermatogenesis associated 5##AM392939|SPATA5|166378|spermatogenesis associated 5##AM393832|SPATA5|166378|spermatogenesis associated 5	0.0	
chr4	43418575	43418686	reg1040894.p2	3.703	+	AB528853 NM_001080476	-523349	+	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	-759542	-	NM_001080505	-1018775	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	1031923	-	AK123347 NM_198353	1032193	-	AK096895 BC103995 BC103996 NM_182592	1235027	-	NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK123347|KCTD8|386617|potassium channel tetramerisation domain containing 8##NM_198353|KCTD8|386617|potassium channel tetramerisation domain containing 8##AK096895|YIPF7|285525|Yip1 domain family, member 7##BC103995|YIPF7|285525|Yip1 domain family, member 7##BC103996|YIPF7|285525|Yip1 domain family, member 7##NM_182592|YIPF7|285525|Yip1 domain family, member 7	0.0	
chr4	57253375	57253496	reg1037646.p1	3.703	+	AK126014 NM_020722	-217075	+	AK023683 NM_025009 TSC_hg19_v1_chr4_+_56815093 BC136535 BC136536	-438344	+	TSC_hg19_v1_chr4_+_56719840 BC094751 NM_001024924 NM_018261 NM_178237 AK001755 AK027413	-533570	+	AF516672 AY422212 BC142709 TSC_hg19_v1_chr4_-_57253644 AF161436 AK303733 BC141824 AK294332 AY314787 BC015096 NM_181806 AK316296 AK304309 BX648853	192	-	AB590152 CU678610 DQ893484 DQ896410 TSC_hg19_v1_chr4_-_57301775 AK290942 BC004200 U00238 AK222759 D13757 AK312297 NM_002703	48321	-	TSC_hg19_v1_chr4_+_57301910 NM_006452 AK294821 BC010273	48484	+	AK126014|KIAA1211|57482|KIAA1211##NM_020722|KIAA1211|57482|KIAA1211##AK023683|CEP135|9662|centrosomal protein 135kDa##NM_025009|CEP135|9662|centrosomal protein 135kDa##BC136535|CEP135|9662|centrosomal protein 135kDa##BC136536|CEP135|9662|centrosomal protein 135kDa##BC094751|EXOC1|55763|exocyst complex component 1##NM_001024924|EXOC1|55763|exocyst complex component 1##NM_018261|EXOC1|55763|exocyst complex component 1##NM_178237|EXOC1|55763|exocyst complex component 1##AK001755|EXOC1|55763|exocyst complex component 1##AK027413|EXOC1|55763|exocyst complex component 1##AF516672|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AY422212|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC142709|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AF161436|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK303733|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC141824|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK294332|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AY314787|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BC015096|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##NM_181806|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK316296|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##AK304309|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##BX648853|AASDH|132949|aminoadipate-semialdehyde dehydrogenase##DQ893484|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##DQ896410|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##AK290942|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##BC004200|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##U00238|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##AK222759|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##D13757|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##AK312297|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##NM_002703|PPAT|5471|phosphoribosyl pyrophosphate amidotransferase##NM_006452|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase##AK294821|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase##BC010273|PAICS|10606|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase	0.0	
chr6	24547589	24547739	reg1039579.p1	3.703	+	TSC_hg19_v1_chr6_+_24495196 AK314357 BC034321 NM_001080 NM_170740 DQ891671 DQ894857 AJ427355 Y11192	-52469	+	TSC_hg19_v1_chr6_+_24495080 AK290800 AK294699 AK315380	-52586	+	L11702 CU676688 AY007546 BC093645 BC112001 L11701 AK310692 BC020748 NM_177483 AJ308108 NM_001503	-57871	-	AK310289 NM_001252328	35790	-	AK296310 AK295008 AK307503 AK296426 BC140821 BC144628 NM_001168375 NM_001168376 TSC_hg19_v1_chr6_-_24646374 AB002317 BC152460 NM_001168374 NM_001168377 NM_014809	98504	-	AJ420495 TSC_hg19_v1_chr6_-_24667106 AK296623 AB587417 AK002168 EU446614 BC110375 AF223469 AJ269473 AF201687 BC017553 NM_016614 AK308836	119306	-	AK314357|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##BC034321|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_001080|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##NM_170740|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ891671|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##DQ894857|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AJ427355|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##Y11192|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK290800|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK294699|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##AK315380|ALDH5A1|7915|aldehyde dehydrogenase 5 family, member A1##L11702|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AY007546|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC093645|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC112001|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##L11701|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310692|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##BC020748|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_177483|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AJ308108|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##NM_001503|GPLD1|2822|glycosylphosphatidylinositol specific phospholipase D1##AK310289|KIAA0319|9856|KIAA0319##NM_001252328|KIAA0319|9856|KIAA0319##AK296310|KIAA0319|9856|KIAA0319##AK295008|KIAA0319|9856|KIAA0319##AK307503|KIAA0319|9856|KIAA0319##AK296426|KIAA0319|9856|KIAA0319##BC140821|KIAA0319|9856|KIAA0319##BC144628|KIAA0319|9856|KIAA0319##NM_001168375|KIAA0319|9856|KIAA0319##NM_001168376|KIAA0319|9856|KIAA0319##AB002317|KIAA0319|9856|KIAA0319##BC152460|KIAA0319|9856|KIAA0319##NM_001168374|KIAA0319|9856|KIAA0319##NM_001168377|KIAA0319|9856|KIAA0319##NM_014809|KIAA0319|9856|KIAA0319##AJ420495|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK296623|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK002168|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##EU446614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC110375|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF223469|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AJ269473|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AF201687|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##BC017553|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##NM_016614|TDP2|51567|tyrosyl-DNA phosphodiesterase 2##AK308836|TDP2|51567|tyrosyl-DNA phosphodiesterase 2	0.0	
chrX	149106428	149106609	reg1026745.p1	3.703	+	AK313943 NM_001166400 NM_001166401 NM_005364 BC002455 BC012744	-96548	+	AK292272 AK313321 NM_001080790 BC002351 NM_005365	-242923	+	NM_001164415 NM_016153	-250793	+	L43575 TSC_hg19_v1_chrX_-_149106661 U66042 NM_001013845	164	-	TSC_hg19_v1_chrX_+_149529838 AK302612	423315	+	TSC_hg19_v1_chrX_+_149531583 NM_001177465 AK294478	425044	+	AK313943|MAGEA8|4107|melanoma antigen family A, 8##NM_001166400|MAGEA8|4107|melanoma antigen family A, 8##NM_001166401|MAGEA8|4107|melanoma antigen family A, 8##NM_005364|MAGEA8|4107|melanoma antigen family A, 8##BC002455|MAGEA8|4107|melanoma antigen family A, 8##BC012744|MAGEA8|4107|melanoma antigen family A, 8##AK292272|MAGEA9|4108|melanoma antigen family A, 9##AK313321|MAGEA9|4108|melanoma antigen family A, 9##NM_001080790|MAGEA9B|728269|melanoma antigen family A, 9B##BC002351|MAGEA9|4108|melanoma antigen family A, 9##NM_005365|MAGEA9|4108|melanoma antigen family A, 9##NM_001164415|HSFX2|100130086|heat shock transcription factor family, X linked 2##NM_016153|HSFX1|100506164|heat shock transcription factor family, X linked 1##L43575|CXorf40B|541578|chromosome X open reading frame 40B##U66042|CXorf40B|541578|chromosome X open reading frame 40B##NM_001013845|CXorf40B|541578|chromosome X open reading frame 40B##AK302612|MAMLD1|10046|mastermind-like domain containing 1##NM_001177465|MAMLD1|10046|mastermind-like domain containing 1##AK294478|MAMLD1|10046|mastermind-like domain containing 1	0.0	
chr10	45461264	45461408	reg1040436.p1	3.702	+	TSC_hg19_v1_chr10_+_45455249 AY216713 AY216714 AY216715 AY216716 NM_032023 BC032593 AF260335 AK311531	-6104	+	AK056518 TSC_hg19_v1_chr10_-_45455156	-6189	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	-54618	+	BC011402 AB025244 TSC_hg19_v1_chr10_-_45474258 AK002191 AK098476 AL136653 AB022718 AK300839 AK312496 NM_007021	12933	-	NM_006963 AK291508 AK312278 BC053687 BC010642	34991	+	TSC_hg19_v1_chr10_-_45496265 AK311351 HQ258049 BC062568 BC130369 BC130395 AK055129 NM_001039380	35028	-	AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##BC011402|C10orf10|11067|chromosome 10 open reading frame 10##AB025244|C10orf10|11067|chromosome 10 open reading frame 10##AK002191|C10orf10|11067|chromosome 10 open reading frame 10##AK098476|C10orf10|11067|chromosome 10 open reading frame 10##AL136653|C10orf10|11067|chromosome 10 open reading frame 10##AB022718|C10orf10|11067|chromosome 10 open reading frame 10##AK300839|C10orf10|11067|chromosome 10 open reading frame 10##AK312496|C10orf10|11067|chromosome 10 open reading frame 10##NM_007021|C10orf10|11067|chromosome 10 open reading frame 10##NM_006963|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK291508|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK312278|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC053687|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC010642|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK311351|C10orf25|220979|chromosome 10 open reading frame 25##HQ258049|C10orf25|220979|chromosome 10 open reading frame 25##BC062568|C10orf25|220979|chromosome 10 open reading frame 25##BC130369|C10orf25|220979|chromosome 10 open reading frame 25##BC130395|C10orf25|220979|chromosome 10 open reading frame 25##AK055129|C10orf25|220979|chromosome 10 open reading frame 25##NM_001039380|C10orf25|220979|chromosome 10 open reading frame 25	0.498818	CTCF.p2:-18:0.467
chr11	3048957	3049050	reg1031882.p1	3.702	+	TSC_hg19_v1_chr11_-_3013610 NM_005969 U77456 AK312599	-35404	-	AK316324 TSC_hg19_v1_chr11_-_3013560	-35448	-	TSC_hg19_v1_chr11_-_3013522 AK299515	-35478	-	BT009913 CU678270 DQ890773 AK308005 TSC_hg19_v1_chr11_-_3078625 AB208814 AF288206 AF288207 AK222614 AK296763 AK131221 AK096313 AK295371 AK298514 AK302644 BX647906 AK289432 BC002880 NM_001014437 NM_001194997 NM_001751 NM_139273	29635	-	AK301003 TSC_hg19_v1_chr11_-_3147850	98840	-	TSC_hg19_v1_chr11_-_3186504 BC032646 BC039579 AF392453 AL136918	137486	-	NM_005969|NAP1L4|4676|nucleosome assembly protein 1-like 4##U77456|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK312599|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK316324|NAP1L4|4676|nucleosome assembly protein 1-like 4##AK299515|NAP1L4|4676|nucleosome assembly protein 1-like 4##BT009913|CARS|833|cysteinyl-tRNA synthetase##DQ890773|CARS|833|cysteinyl-tRNA synthetase##AK308005|CARS|833|cysteinyl-tRNA synthetase##AB208814|CARS|833|cysteinyl-tRNA synthetase##AF288206|CARS|833|cysteinyl-tRNA synthetase##AF288207|CARS|833|cysteinyl-tRNA synthetase##AK222614|CARS|833|cysteinyl-tRNA synthetase##AK296763|CARS|833|cysteinyl-tRNA synthetase##AK131221|CARS|833|cysteinyl-tRNA synthetase##AK096313|CARS|833|cysteinyl-tRNA synthetase##AK295371|CARS|833|cysteinyl-tRNA synthetase##AK298514|CARS|833|cysteinyl-tRNA synthetase##AK302644|CARS|833|cysteinyl-tRNA synthetase##BX647906|CARS|833|cysteinyl-tRNA synthetase##AK289432|CARS|833|cysteinyl-tRNA synthetase##BC002880|CARS|833|cysteinyl-tRNA synthetase##NM_001014437|CARS|833|cysteinyl-tRNA synthetase##NM_001194997|CARS|833|cysteinyl-tRNA synthetase##NM_001751|CARS|833|cysteinyl-tRNA synthetase##NM_139273|CARS|833|cysteinyl-tRNA synthetase##AK301003|OSBPL5|114879|oxysterol binding protein-like 5##BC032646|OSBPL5|114879|oxysterol binding protein-like 5##BC039579|OSBPL5|114879|oxysterol binding protein-like 5##AF392453|OSBPL5|114879|oxysterol binding protein-like 5##AL136918|OSBPL5|114879|oxysterol binding protein-like 5	0.0	
chr11	94277521	94277664	reg1032610.p3	3.702	+	AK293616 NM_002033 TSC_hg19_v1_chr11_+_94277086 M58597 BC136373 BC136374	-513	+	NM_001190462	-31898	+	TSC_hg19_v1_chr11_+_94227168 NM_017704 AF025354 AK000196 BC017798 AK000448 AL833977	-50434	+	TSC_hg19_v1_chr11_+_94277605 M58596	7	+	NM_152431 AB079366 AK093475 AX748151 BC031060 DQ891240 DQ894425 AB590313 CU689100	22986	+	TSC_hg19_v1_chr11_+_94501528 BX648729 NM_130847 AK093699 AX748266 AF453742 BC037539 AK074084 AM393663	223997	+	AK293616|PIWIL4|143689|piwi-like 4 (Drosophila)##NM_002033|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58597|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136373|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136374|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##NM_001190462|LOC643037|643037|uncharacterized LOC643037##NM_017704|ANKRD49|54851|ankyrin repeat domain 49##AF025354|ANKRD49|54851|ankyrin repeat domain 49##AK000196|ANKRD49|54851|ankyrin repeat domain 49##BC017798|ANKRD49|54851|ankyrin repeat domain 49##AK000448|ANKRD49|54851|ankyrin repeat domain 49##AL833977|ANKRD49|54851|ankyrin repeat domain 49##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)##AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)##AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)##BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)##BX648729|AMOTL1|154810|angiomotin like 1##NM_130847|AMOTL1|154810|angiomotin like 1##AK093699|AMOTL1|154810|angiomotin like 1##AF453742|AMOTL1|154810|angiomotin like 1##BC037539|AMOTL1|154810|angiomotin like 1##AK074084|AMOTL1|154810|angiomotin like 1##AM393663|AMOTL1|154810|angiomotin like 1	0.0	
chr12	95611046	95611112	reg1018552.p1	3.702	+	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	-143781	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	-213563	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	-213609	-	TSC_hg19_v1_chr12_-_95611206 BC125225 BC125226 BX538322 AK124904 NM_018351	157	-	TSC_hg19_v1_chr12_+_95611582 NM_017599 AK001338 AK225303 AK309943 AK225356 BC014443 AK307864 AL137497 BC064939 BC028597	615	+	TSC_hg19_v1_chr12_+_95676175 AL133113	65139	+	M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC125225|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##BC125226|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##BX538322|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##AK124904|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##NM_018351|FGD6|55785|FYVE, RhoGEF and PH domain containing 6##NM_017599|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK001338|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225303|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK309943|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK225356|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC014443|VEZT|55591|vezatin, adherens junctions transmembrane protein##AK307864|VEZT|55591|vezatin, adherens junctions transmembrane protein##AL137497|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC064939|VEZT|55591|vezatin, adherens junctions transmembrane protein##BC028597|VEZT|55591|vezatin, adherens junctions transmembrane protein##AL133113|VEZT|55591|vezatin, adherens junctions transmembrane protein	0.0	
chr15	100044448	100044628	reg1025824.p1	3.702	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-252896	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-253122	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-254832	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	61615	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	61656	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	61697	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.0	
chr17	75440789	75440856	reg1036612.p1	3.702	+	AB023208 NM_001113494 AJ312322	-68653	+	TSC_hg19_v1_chr17_+_75369418 AK304143	-71397	+	TSC_hg19_v1_chr17_+_75369236 AJ312319 NM_001113493	-71569	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	5823	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	5960	+	AK299828 TSC_hg19_v1_chr17_+_75447450	6567	+	AB023208|SEPT9|10801|septin 9##NM_001113494|SEPT9|10801|septin 9##AJ312322|SEPT9|10801|septin 9##AK304143|SEPT9|10801|septin 9##AJ312319|SEPT9|10801|septin 9##NM_001113493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9	0.499348	CTCF.p2:60:0.499
chr19	33675068	33675248	reg1006154.p1	3.702	+	BC031227 NM_173479 AB527326	-52122	+	BC006108 NM_018025	-103373	+	AF423421 AJ347750 DQ892111 DQ895305 TSC_hg19_v1_chr19_-_33555795 AF268032 AK098246 AK300775 AK315105 BC036447 NM_033103	-119368	-	TSC_hg19_v1_chr19_+_33685155 AK129963	10010	+	AB009462 NM_002333 BC007408 TSC_hg19_v1_chr19_+_33685676 EU176387 AK296536	10445	+	TSC_hg19_v1_chr19_+_33697959 AF085860	22838	+	BC031227|WDR88|126248|WD repeat domain 88##NM_173479|WDR88|126248|WD repeat domain 88##BC006108|GPATCH1|55094|G patch domain containing 1##NM_018025|GPATCH1|55094|G patch domain containing 1##AF423421|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AJ347750|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ892111|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##DQ895305|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AF268032|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK098246|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK300775|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK315105|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##BC036447|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##NM_033103|RHPN2|85415|rhophilin, Rho GTPase binding protein 2##AK129963|LRP3|4037|low density lipoprotein receptor-related protein 3##AB009462|LRP3|4037|low density lipoprotein receptor-related protein 3##NM_002333|LRP3|4037|low density lipoprotein receptor-related protein 3##BC007408|LRP3|4037|low density lipoprotein receptor-related protein 3##EU176387|LRP3|4037|low density lipoprotein receptor-related protein 3##AK296536|LRP3|4037|low density lipoprotein receptor-related protein 3##AF085860|LRP3|4037|low density lipoprotein receptor-related protein 3	0.0	
chr19	3558014	3558156	reg1038109.p2	3.702	+	BC094804 BC068439 NM_001042680 NM_021731 NM_174983 TSC_hg19_v1_chr19_-_3557583	-511	-	TSC_hg19_v1_chr19_-_3557559 BC036706	-530	-	DQ892284 DQ895484 CU691388 TSC_hg19_v1_chr19_-_3557547	-610	-	TSC_hg19_v1_chr19_+_3572941 NM_006339	14841	+	TSC_hg19_v1_chr19_+_3572954 BC002552 AK289500 BC003505	14868	+	TSC_hg19_v1_chr19_+_3572974 AK314201 AK090733 AK310601 AX746593 AF318366	14893	+	BC068439|MFSD12|126321|major facilitator superfamily domain containing 12##NM_001042680|MFSD12|126321|major facilitator superfamily domain containing 12##NM_021731|MFSD12|126321|major facilitator superfamily domain containing 12##NM_174983|MFSD12|126321|major facilitator superfamily domain containing 12##BC036706|MFSD12|126321|major facilitator superfamily domain containing 12##DQ892284|MFSD12|126321|major facilitator superfamily domain containing 12##DQ895484|MFSD12|126321|major facilitator superfamily domain containing 12##NM_006339|HMG20B|10362|high mobility group 20B##BC002552|HMG20B|10362|high mobility group 20B##AK289500|HMG20B|10362|high mobility group 20B##BC003505|HMG20B|10362|high mobility group 20B##AK314201|HMG20B|10362|high mobility group 20B##AK090733|HMG20B|10362|high mobility group 20B##AK310601|HMG20B|10362|high mobility group 20B##AF318366|HMG20B|10362|high mobility group 20B	0.0	
chr22	38900778	38900940	reg1033273.p1	3.702	+	TSC_hg19_v1_chr22_-_38881534 BC045747	-19324	-	TSC_hg19_v1_chr22_+_38864047 AK292102 AL035082 NM_006855 NM_016657 AK222930 BC001277 AK129888 AK223238 AL035081 BC096722 BC098131 BC098156 BC098336 CR456509 CU013108 CU013396 DQ891740 DQ894917 AB528157 CU674644	-36733	+	CR456507 BC039618 U24056 NM_152868 BC032562	-49751	-	TSC_hg19_v1_chr22_-_38902283 BC000595 AL713763	1430	-	AB209595 TSC_hg19_v1_chr22_-_38902309 AK024985 AK074224	1447	-	BC029553 TSC_hg19_v1_chr22_-_38902315	1456	-	BC045747|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AK292102|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AL035082|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##NM_006855|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##NM_016657|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AK222930|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC001277|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AK129888|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AK223238|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AL035081|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC096722|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC098131|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC098156|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC098336|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##CR456509|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##CU013108|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##CU013396|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##DQ891740|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##DQ894917|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##CR456507|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##BC039618|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##U24056|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##NM_152868|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##BC032562|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##BC000595|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AL713763|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AB209595|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AK024985|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AK074224|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##BC029553|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	0.0	
chr2	25589554	25589659	reg1037175.p1	3.702	+	TSC_hg19_v1_chr2_-_25565458 BC032392 NM_175629 NM_175630	-24144	-	TSC_hg19_v1_chr2_-_25565353 AB208833	-24243	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	-24278	-	AK294357 TSC_hg19_v1_chr2_-_25896434 AK300019 BC016655 AF022728 Y12712 AK225724 AK294174 AK094494 BC049366 NM_021907 NM_033147 NM_033148 NM_183360 NM_183361	306795	-	AB385496 TSC_hg19_v1_chr2_-_26101159	511523	-	TSC_hg19_v1_chr2_-_26101174 AB084279	511567	-	BC032392|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175629|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_175630|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AB208833|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK294357|DTNB|1838|dystrobrevin, beta##AK300019|DTNB|1838|dystrobrevin, beta##BC016655|DTNB|1838|dystrobrevin, beta##AF022728|DTNB|1838|dystrobrevin, beta##Y12712|DTNB|1838|dystrobrevin, beta##AK225724|DTNB|1838|dystrobrevin, beta##AK294174|DTNB|1838|dystrobrevin, beta##AK094494|DTNB|1838|dystrobrevin, beta##BC049366|DTNB|1838|dystrobrevin, beta##NM_021907|DTNB|1838|dystrobrevin, beta##NM_033147|DTNB|1838|dystrobrevin, beta##NM_033148|DTNB|1838|dystrobrevin, beta##NM_183360|DTNB|1838|dystrobrevin, beta##NM_183361|DTNB|1838|dystrobrevin, beta##AB084279|ASXL2|55252|additional sex combs like 2 (Drosophila)	0.0	
chr4	131280845	131280944	reg1031897.p2	3.702	+	NM_001099783	-1263613	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-1266027	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-1266304	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	2789562	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	2792389	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	3842024	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.960297	CTCF.p2:0:0.960
chr7	136854082	136854203	reg1030998.p1	3.702	+	AK125233 AY034604 AY456125 AY456126 AY456127 NM_000739 NM_001006631 NM_001006632 AY219705 NM_001006626 AY219703 NM_001006629 AY034605 NM_001006628 TSC_hg19_v1_chr7_+_136554002	-300225	+	AY034603 AY219704 NM_001006627 NM_001006630 AK290236 AL832585	-300736	+	BC013989 TSC_hg19_v1_chr7_-_135662202 NM_001128619 NM_145808	-1191940	-	TSC_hg19_v1_chr7_-_137028305 D90226	174161	-	TSC_hg19_v1_chr7_-_137028371 AK290488	174231	-	X52946 TSC_hg19_v1_chr7_-_137028443 AK313424	174299	-	AK125233|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034604|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456125|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456126|CHRM2|1129|cholinergic receptor, muscarinic 2##AY456127|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_000739|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006631|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006632|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219705|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006626|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219703|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006629|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034605|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006628|CHRM2|1129|cholinergic receptor, muscarinic 2##AY034603|CHRM2|1129|cholinergic receptor, muscarinic 2##AY219704|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006627|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001006630|CHRM2|1129|cholinergic receptor, muscarinic 2##AK290236|CHRM2|1129|cholinergic receptor, muscarinic 2##AL832585|CHRM2|1129|cholinergic receptor, muscarinic 2##NM_001128619|LUZP6|767558|leucine zipper protein 6##NM_145808|MTPN|136319|myotrophin##D90226|PTN|5764|pleiotrophin##AK290488|PTN|5764|pleiotrophin##X52946|PTN|5764|pleiotrophin##AK313424|PTN|5764|pleiotrophin	0.059694	
chr9	129464797	129464949	reg1038347.p1	3.702	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	-88112	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-375706	+	AK309713 NM_001134778	-954396	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	102437	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	158071	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	212231	+	NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AK309713|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001134778|PBX3|5090|pre-B-cell leukemia homeobox 3##NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	1.357245	CTCF.p2:39:0.875	CTCF.p2:66:0.482
chrX	8078684	8078780	reg1038084.p1	3.702	+	AK304586 TSC_hg19_v1_chrX_-_7895766 NM_001142389 NM_001172672	-182961	-	AK289888 U03886 NM_004650 BC020746	-183282	-	AF167081 NM_013452	-268430	+	AF167079 NM_016378	60575	-	AF167078 AF167080 NM_001001888	354138	+	X60299 TSC_hg19_v1_chrX_-_8700155	621411	-	AK304586|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001142389|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001172672|PNPLA4|8228|patatin-like phospholipase domain containing 4##AK289888|PNPLA4|8228|patatin-like phospholipase domain containing 4##U03886|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_004650|PNPLA4|8228|patatin-like phospholipase domain containing 4##BC020746|PNPLA4|8228|patatin-like phospholipase domain containing 4##AF167081|VCX|26609|variable charge, X-linked##NM_013452|VCX|26609|variable charge, X-linked##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016378|VCX2|51480|variable charge, X-linked 2##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167080|VCX3B|425054|variable charge, X-linked 3B##NM_001001888|VCX3B|425054|variable charge, X-linked 3B##X60299|KAL1|3730|Kallmann syndrome 1 sequence	0.0	
chrX	91487324	91487426	reg1036506.p1	3.702	+	AJ564931 NM_001168360 NM_001168361 NM_001168362 NM_001168363 AF206516 AF217288 AY861432 AY861433 AY861434 AY861435	-396894	+	AB026187 AF332218 AF332219 AJ564932 NM_014522 NM_032968 NM_032969	-397717	+	NM_032967 AJ276804 AJ564847 AK299638 AK299813 AK316263 TSC_hg19_v1_chrX_+_91034373	-453058	+	AK090772 D50370 TSC_hg19_v1_chrX_-_92928576 BC034954 AK315176 AK223621 BC094729 AK095682 NM_004538	1441248	-	NM_001171109 NM_001171110 NM_001171111 NM_173698	1441636	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	4452376	+	AJ564931|PCDH11X|27328|protocadherin 11 X-linked##NM_001168360|PCDH11X|27328|protocadherin 11 X-linked##NM_001168361|PCDH11X|27328|protocadherin 11 X-linked##NM_001168362|PCDH11X|27328|protocadherin 11 X-linked##NM_001168363|PCDH11X|27328|protocadherin 11 X-linked##AF206516|PCDH11X|27328|protocadherin 11 X-linked##AF217288|PCDH11X|27328|protocadherin 11 X-linked##AY861432|PCDH11X|27328|protocadherin 11 X-linked##AY861433|PCDH11X|27328|protocadherin 11 X-linked##AY861434|PCDH11X|27328|protocadherin 11 X-linked##AY861435|PCDH11X|27328|protocadherin 11 X-linked##AB026187|PCDH11X|27328|protocadherin 11 X-linked##AF332218|PCDH11X|27328|protocadherin 11 X-linked##AF332219|PCDH11X|27328|protocadherin 11 X-linked##AJ564932|PCDH11X|27328|protocadherin 11 X-linked##NM_014522|PCDH11X|27328|protocadherin 11 X-linked##NM_032968|PCDH11X|27328|protocadherin 11 X-linked##NM_032969|PCDH11X|27328|protocadherin 11 X-linked##NM_032967|PCDH11X|27328|protocadherin 11 X-linked##AJ276804|PCDH11X|27328|protocadherin 11 X-linked##AJ564847|PCDH11X|27328|protocadherin 11 X-linked##AK299813|PCDH11X|27328|protocadherin 11 X-linked##AK316263|PCDH11X|27328|protocadherin 11 X-linked##AK090772|NAP1L3|4675|nucleosome assembly protein 1-like 3##D50370|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC034954|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK315176|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK223621|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC094729|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK095682|NAP1L3|4675|nucleosome assembly protein 1-like 3##NM_004538|NAP1L3|4675|nucleosome assembly protein 1-like 3##NM_001171109|FAM133A|286499|family with sequence similarity 133, member A##NM_001171110|FAM133A|286499|family with sequence similarity 133, member A##NM_001171111|FAM133A|286499|family with sequence similarity 133, member A##NM_173698|FAM133A|286499|family with sequence similarity 133, member A##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)	0.790205	CTCF.p2:2:0.790
chr10	73485854	73485933	reg1027127.p1	3.701	+	AK123442 BC071608 NM_001164375 TSC_hg19_v1_chr10_-_73479685	-6301	-	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	-329155	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	-406847	+	AK074172 NM_001168390	11687	-	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	47413	-	AY563165 AY563166 NM_001171933 NM_001171934	69634	+	AK123442|C10orf105|414152|chromosome 10 open reading frame 105##BC071608|C10orf105|414152|chromosome 10 open reading frame 105##NM_001164375|C10orf105|414152|chromosome 10 open reading frame 105##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK074172|C10orf105|414152|chromosome 10 open reading frame 105##NM_001168390|C10orf105|414152|chromosome 10 open reading frame 105##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54##AY563165|CDH23|64072|cadherin-related 23##AY563166|CDH23|64072|cadherin-related 23##NM_001171933|CDH23|64072|cadherin-related 23##NM_001171934|CDH23|64072|cadherin-related 23	0.349312	CTCF.p2:9:0.349
chr12	116010448	116010556	reg1036563.p2	3.701	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-888362	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1164284	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1166578	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	704448	-	TSC_hg19_v1_chr12_-_116715263 AY338463	704658	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	960727	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.0	
chr14	106978208	106978316	reg1038690.p1	3.701	+	BX640710 TSC_hg19_v1_chr14_-_106967543 AK097354 AK097357 L22586 AK092384 AK125238 AX747511 AK125703 AK092976 AX747834 AK097028 L06610	-10695	-	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	-10962	-	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	-39804	+	GQ232968 DQ454715 DQ454740 DQ454804 FJ840179 GU552701 FJ840340 GQ232950 GQ232981 GU552754 DQ454538 DQ454540 DQ454585 DQ523858 GU552713 AY003858 DQ454386 DQ454541 DQ454621 DQ454676 GU552719 GU552720 GU552767 AY003800 EF566901 DQ454598 DQ454606 DQ454788 DQ455001 DQ454592 Z11947 FJ873823 FJ873826 FJ873839 FJ873846 FJ873864 FJ873876 FJ873933 FJ873992 HM116214 EF175393 AY003851 EF175424 EU350424 GU358679 JF810268 EU099085 EU099261 AY206990 AF103064 AM279530 HM996031 GQ903512 AF103334 AF062095 AF103183 AF103113 L07311 AF165109 AY062321 HM774774 JN110645 JN110658 JN110671 JN110688 JN110706 JN110718 FJ385349 HM774039 HM774378 HM774566 HM774910 HQ704000 HQ704008 HQ704009 AY062300 HM774238 HM775050 AF103319 AF194121 HM775049 DQ100804 EU146317 EU146347 EU146389 DQ100818 DQ100905 AJ006652 AF485463 AF485473 AY423189 AY423190 AY423196 AY423198 AY423199 AY423207 HM996483 AF103257 AY941883 DQ100909 AF006520 AJ249628 AY866746 DQ187712 DQ524024 GU570284 HM995016 HM995139 HM995190 HM995191 HM995236 HM995887 HM995889 HM995890 HM995891 HM995919 HM996054 HM996304 HM996511 AJ245323 AJ245324 DQ322799 DQ840839 DQ840841 DQ926120 DQ926247 DQ926326 AB374202 AF115123 AF174048 AJ245353 AJ245354 AJ245355 AJ278773 AY640567 AY866807 AY941926 AY944711 DQ100900 DQ100918 DQ926040 DQ926081 DQ926084 DQ926450 DQ926565 DQ926602 DQ926604 EU794403 Z18824 AB021525 AB063673 AB363090 AB363101 AB363126 AB363166 AF021949 AF021979 AF035023 AF052525 AF062215 AF062235 AF129457 AF174081 AF398962 AF408730 AF455546 AF455553 AF471175 AF471178 AF471201 AF471216 AF471265 AF471373 AF471475 AF471476 AF471477 AF471486 AF471490 AF471494 AF471528 AJ239363 AJ239370 AJ389190 AJ413993 AJ627249 AM040520 AM040566 AM259133 AM259134 AY466507 AY866733 AY866738 AY866759 AY866795 AY941854 AY941870 AY941906 AY941952 AY941974 AY941976 AY941980 AY962566 D83682 DQ065617 DQ205182 DQ212502 DQ212503 DQ535300 DQ535366 DQ535419 DQ535472 DQ926167 DQ926385 DQ926389 DQ926413 DQ926426 DQ926459 DQ926557 DQ926616 EF177950 EU549721 FJ492926 GQ903506 GU570336 GU570338 GU570341 HM152510 U00501 U77374 X59703 X87449 Z33898 Z96965 Z98722 AF283800 AJ519241 HM995874 AJ519332 L28051 AJ519250 AJ519294 AY392920 AY393056 L08082 AF062182 AF062206 AF062253 AF062285 AY190818 X81729 Z47218 TSC_hg19_v1_chr14_-_106994347 AK097076 AK097206 AK097859 AK126358 AK128664 AK130501 AK301358 BX640853 BX640854	15912	-	DQ187707 GU552700 GU552764 AY003783 EF175429 FJ694883 EU099078 EU099213 AM183990 EU099124 HM774924 HM774242 JN110729 JN110849 AF103239 FJ385422 FJ385433 HM773968 HM773995 HM774338 HM774389 HM774601 HM774867 HM996424 HQ704020 FJ385411 EU146318 JN110975 AF062300 AF062305 DQ524053 HM994912 HM994914 HM994916 HM994920 HM995673 HM995674 HM995675 HM995676 HM995783 HM995910 HM995945 HM996441 HM996522 AF062299 AF471505 DQ187607 DQ322806 DQ840692 DQ840693 DQ840702 DQ840814 AM279609 DQ926615 EF178081 X99992 AB063924 AB066892 AB066969 AB067011 AB067080 AB067263 AF394199 AF455925 AF459632 AF471500 AF471503 AF471504 AJ300805 AJ579185 AY055477 AY055483 AY640482 AY941852 D83692 DQ005278 DQ005282 DQ100801 DQ926649 GU570351 GU570352 GU570354 L12185 L12186 X64240 Y11898 Z96974 HM995768 AJ519245 AJ519224 AJ519230 AJ519233 AJ519246 AJ519249 AJ519251 AJ519253 AJ519255 HM995877 AJ519222 AJ519299 AY393054 AY393058 AY393158 AY393161 AY190818 Z36887 AY623427 X52894 BC090938 TSC_hg19_v1_chr14_-_107013458	35028	-	TSC_hg19_v1_chr14_-_107013478 AK093806 AK097303 AK125632 AK126320 AK129510 AX748317	35214	-	BX640710|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK097354|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097357|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK092384|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125238|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092976|IGHM|3507|immunoglobulin heavy constant mu##AK097028|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221##AF035023|IGHV3-48|28424|immunoglobulin heavy variable 3-48##AK097076|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097859|IGHM|3507|immunoglobulin heavy constant mu##AK128664|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130501|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640854|IGH@|3492|immunoglobulin heavy locus##AY623427|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC090938|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097303|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125632|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129510|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.0	
chr17	18935605	18935786	reg1010802.p2	3.701	+	TSC_hg19_v1_chr17_-_18908078 NM_001039999	-27616	-	AK057946 NM_001042450 NM_152351 AK298345 BC062617 BC034380	-80191	+	NM_001243940 AB007851 BC101670 BC101672 BC143475	-166874	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	14591	-	BC157869 NM_001129778	95086	+	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	205013	+	NM_001039999|FAM83G|644815|family with sequence similarity 83, member G##AK057946|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001042450|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_152351|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##AK298345|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC062617|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##BC034380|SLC5A10|125206|solute carrier family 5 (sodium/glucose cotransporter), member 10##NM_001243940|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##AB007851|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC101670|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC101672|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BC143475|PRPSAP2|5636|phosphoribosyl pyrophosphate synthetase-associated protein 2##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2	0.0	
chr19	6562603	6562714	reg1037212.p1	3.701	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	-31632	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-60341	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-80875	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	28374	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	28448	-	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	28500	-	NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule	0.828189	CTCF.p2:-17:0.828
chr22	29196619	29196799	reg1031875.p1	3.701	+	TSC_hg19_v1_chr22_+_29196668 AF086143	-26	+	TSC_hg19_v1_chr22_-_29196555 BC012841 AK292188 AK313761 NM_001079539 NM_005080	-142	-	BC015709 TSC_hg19_v1_chr22_-_29196526 AB463352 AM393640 CU013207 CU013495 DQ890989 DQ894165 CU674466 CR456611 AB076383 AB076384 BC000938 M31627	-218	-	TSC_hg19_v1_chr22_+_29279579 NM_001206998 AB051436 CR456397	83068	+	AK096397 NM_032173	116667	+	TSC_hg19_v1_chr22_+_29449893 BC042614	253216	+	BC012841|XBP1|7494|X-box binding protein 1##AK292188|XBP1|7494|X-box binding protein 1##AK313761|XBP1|7494|X-box binding protein 1##NM_001079539|XBP1|7494|X-box binding protein 1##NM_005080|XBP1|7494|X-box binding protein 1##BC015709|XBP1|7494|X-box binding protein 1##AM393640|XBP1|7494|X-box binding protein 1##CU013207|XBP1|7494|X-box binding protein 1##CU013495|XBP1|7494|X-box binding protein 1##DQ890989|XBP1|7494|X-box binding protein 1##DQ894165|XBP1|7494|X-box binding protein 1##CR456611|XBP1|7494|X-box binding protein 1##AB076383|XBP1|7494|X-box binding protein 1##AB076384|XBP1|7494|X-box binding protein 1##BC000938|XBP1|7494|X-box binding protein 1##M31627|XBP1|7494|X-box binding protein 1##NM_001206998|ZNRF3|84133|zinc and ring finger 3##AB051436|ZNRF3|84133|zinc and ring finger 3##CR456397|ZNRF3|84133|zinc and ring finger 3##AK096397|ZNRF3|84133|zinc and ring finger 3##NM_032173|ZNRF3|84133|zinc and ring finger 3##BC042614|ZNRF3|84133|zinc and ring finger 3	0.0	
chr5	121794104	121794209	reg1034371.p1	3.701	+	TSC_hg19_v1_chr5_+_121647890 DQ227317 NM_001242935 NM_005460 BC094759 BC040552 AK304646 AK310835 AF076929 BC033743	-146298	+	AK299687 TSC_hg19_v1_chr5_+_121647434	-146744	+	NM_001195535	-298286	+	BC029465 TSC_hg19_v1_chr5_-_121814783	20627	-	TSC_hg19_v1_chr5_+_122110737 AK023716 NM_003100	316588	+	AK023581 TSC_hg19_v1_chr5_+_122110776 BC003382 AF065482 AK222968	316613	+	DQ227317|SNCAIP|9627|synuclein, alpha interacting protein##NM_001242935|SNCAIP|9627|synuclein, alpha interacting protein##NM_005460|SNCAIP|9627|synuclein, alpha interacting protein##BC094759|SNCAIP|9627|synuclein, alpha interacting protein##BC040552|SNCAIP|9627|synuclein, alpha interacting protein##AK304646|SNCAIP|9627|synuclein, alpha interacting protein##AK310835|SNCAIP|9627|synuclein, alpha interacting protein##AF076929|SNCAIP|9627|synuclein, alpha interacting protein##BC033743|SNCAIP|9627|synuclein, alpha interacting protein##AK299687|SNCAIP|9627|synuclein, alpha interacting protein##NM_001195535|LOC100505841|100505841|zinc finger protein 474-like##AK023716|SNX2|6643|sorting nexin 2##NM_003100|SNX2|6643|sorting nexin 2##AK023581|SNX2|6643|sorting nexin 2##BC003382|SNX2|6643|sorting nexin 2##AF065482|SNX2|6643|sorting nexin 2##AK222968|SNX2|6643|sorting nexin 2	0.0	
chr6	53358002	53358161	reg1008233.p2	3.701	+	AK299674 AK302948 TSC_hg19_v1_chr6_-_53213749 AF338241 NM_001242828 NM_001242830 NM_001242831 NM_021814	-144220	-	TSC_hg19_v1_chr6_-_53213736 AB209798 AL136939 BC074503 BC067123	-144360	-	AK125098 TSC_hg19_v1_chr6_-_53213676	-144442	-	TSC_hg19_v1_chr6_-_53409483 AB516284 CU691792 CU692650 EU832317 EU832402	51385	-	TSC_hg19_v1_chr6_-_53409528 BC039894 M90656	51436	-	TSC_hg19_v1_chr6_-_53409821 AB262176 BC022487	51732	-	AK299674|ELOVL5|60481|ELOVL fatty acid elongase 5##AK302948|ELOVL5|60481|ELOVL fatty acid elongase 5##AF338241|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242828|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242830|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_001242831|ELOVL5|60481|ELOVL fatty acid elongase 5##NM_021814|ELOVL5|60481|ELOVL fatty acid elongase 5##AB209798|ELOVL5|60481|ELOVL fatty acid elongase 5##AL136939|ELOVL5|60481|ELOVL fatty acid elongase 5##BC074503|ELOVL5|60481|ELOVL fatty acid elongase 5##BC067123|ELOVL5|60481|ELOVL fatty acid elongase 5##AK125098|ELOVL5|60481|ELOVL fatty acid elongase 5##AB516284|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EU832317|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##EU832402|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC039894|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##M90656|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##AB262176|GCLC|2729|glutamate-cysteine ligase, catalytic subunit##BC022487|GCLC|2729|glutamate-cysteine ligase, catalytic subunit	0.201486	
chr8	8204213	8204343	reg1032970.p1	3.701	+	TSC_hg19_v1_chr8_-_8175862 AF075060	-28390	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-118136	+	AK292586 NM_001193630	-420420	+	AK122582 NM_001080826	34944	-	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	355420	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	546660	-	AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1	0.0	
chr9	37032824	37032955	reg1033515.p1	3.701	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-459965	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-631714	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-631992	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	1527	-	TSC_hg19_v1_chr9_+_37079908 AK091718	47017	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	47119	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.0	
chrX	39719839	39719969	reg1029307.p1	3.701	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-1056364	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-1056444	+	BC008908 NM_021242	-1056832	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	236788	-	BC114220 NM_001123383 NM_001123384	316677	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	720282	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.08544	
chr1	153917881	153918061	reg1035414.p2	3.700	+	AK094665 NM_020699 TSC_hg19_v1_chr1_-_153895452	-22520	-	BC003041 BC009916 NM_024330 AK075377 TSC_hg19_v1_chr1_+_153747897 AK123997 AY358409 AK074134 DQ893429 DQ895951 AK027499 BC029792	-170105	+	TSC_hg19_v1_chr1_+_153700548 BX640950 CR749376 CR627233 BC116458 AK290025 CR749212 BX640786 NM_023015	-217418	+	TSC_hg19_v1_chr1_-_153919148 AB007945 NM_014856	1175	-	AY726597 AK096382 BC053562 TSC_hg19_v1_chr1_-_153931074 AF289574	13022	-	TSC_hg19_v1_chr1_-_153931089 AK223559	13113	-	AK094665|GATAD2B|57459|GATA zinc finger domain containing 2B##NM_020699|GATAD2B|57459|GATA zinc finger domain containing 2B##BC003041|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC009916|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##NM_024330|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK075377|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK123997|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AY358409|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK074134|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ893429|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##DQ895951|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##AK027499|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BC029792|SLC27A3|11000|solute carrier family 27 (fatty acid transporter), member 3##BX640950|INTS3|65123|integrator complex subunit 3##CR749376|INTS3|65123|integrator complex subunit 3##CR627233|INTS3|65123|integrator complex subunit 3##BC116458|INTS3|65123|integrator complex subunit 3##AK290025|INTS3|65123|integrator complex subunit 3##CR749212|INTS3|65123|integrator complex subunit 3##BX640786|INTS3|65123|integrator complex subunit 3##NM_023015|INTS3|65123|integrator complex subunit 3##AB007945|DENND4B|9909|DENN/MADD domain containing 4B##NM_014856|DENND4B|9909|DENN/MADD domain containing 4B##AY726597|CRTC2|200186|CREB regulated transcription coactivator 2##AK096382|CRTC2|200186|CREB regulated transcription coactivator 2##BC053562|CRTC2|200186|CREB regulated transcription coactivator 2##AF289574|CRTC2|200186|CREB regulated transcription coactivator 2##AK223559|CRTC2|200186|CREB regulated transcription coactivator 2	0.0	
chr16	28944510	28944650	reg1036715.p2	3.700	+	NM_001178098 NM_001770 BC006338 AK301363 AK313577 BC052294 M21097 X13312 AK307295 M28170 DQ893016 DQ896261 AK130657 AK301167 AK304456	-1278	+	AY129017 TSC_hg19_v1_chr16_-_28936536 AK295229 BC046118 AK026935 NM_024816 BC058900	-8072	-	TSC_hg19_v1_chr16_+_28891234 AK128456	-53277	+	BC068007 BC101741 BC112182 TSC_hg19_v1_chr16_+_28962327 AF458593 NM_032815 AK074761 AK304172	17658	+	TSC_hg19_v1_chr16_+_28986106 BC038961 NM_001142448 NM_001142449 NM_001142450 NM_001142451 NM_032038 AK095677 AK289787 BC065235 AF370423 BC047741 AB209402 AL390215 AF212371 BC008325 AM392778 AM393748 AB528362 CU678917 BC006156	41674	+	BC011563 NM_001014989	51566	+	NM_001178098|CD19|930|CD19 molecule##NM_001770|CD19|930|CD19 molecule##BC006338|CD19|930|CD19 molecule##AK301363|CD19|930|CD19 molecule##AK313577|CD19|930|CD19 molecule##BC052294|CD19|930|CD19 molecule##M21097|CD19|930|CD19 molecule##X13312|CD19|930|CD19 molecule##AK307295|CD19|930|CD19 molecule##DQ893016|CD19|930|CD19 molecule##DQ896261|CD19|930|CD19 molecule##AK130657|CD19|930|CD19 molecule##AK301167|CD19|930|CD19 molecule##AK304456|CD19|930|CD19 molecule##AK295229|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC046118|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##AK026935|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##NM_024816|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC058900|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##AK128456|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC068007|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC101741|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC112182|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AF458593|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##NM_032815|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK074761|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK304172|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC038961|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142448|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142449|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142450|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142451|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_032038|SPNS1|83985|spinster homolog 1 (Drosophila)##AK095677|SPNS1|83985|spinster homolog 1 (Drosophila)##AK289787|SPNS1|83985|spinster homolog 1 (Drosophila)##BC065235|SPNS1|83985|spinster homolog 1 (Drosophila)##AF370423|SPNS1|83985|spinster homolog 1 (Drosophila)##BC047741|SPNS1|83985|spinster homolog 1 (Drosophila)##AL390215|SPNS1|83985|spinster homolog 1 (Drosophila)##AF212371|SPNS1|83985|spinster homolog 1 (Drosophila)##BC008325|SPNS1|83985|spinster homolog 1 (Drosophila)##AM392778|SPIN1|10927|spindlin 1##AM393748|SPIN1|10927|spindlin 1##BC006156|SPNS1|83985|spinster homolog 1 (Drosophila)##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells	0.099295	
chr16	56932916	56933041	reg1035523.p1	3.700	+	AK315298 NM_000339 NM_001126107 NM_001126108 AK223133 X91220 U44128 AB463268	-33846	+	AK294176 NM_001242796	-115589	+	NM_001242795 AK056637 TSC_hg19_v1_chr16_+_56815740	-117243	+	NM_001010989 NM_001010990 NM_014685	32769	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	33163	+	M30185 AK297699 NM_000078 TSC_hg19_v1_chr16_+_56995861 AK291586 BC025739 EU176529 CU693046 BT020064 M83573	62859	+	AK315298|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_000339|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126107|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126108|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK223133|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##X91220|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##U44128|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK294176|NUP93|9688|nucleoporin 93kDa##NM_001242796|NUP93|9688|nucleoporin 93kDa##NM_001242795|NUP93|9688|nucleoporin 93kDa##AK056637|NUP93|9688|nucleoporin 93kDa##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##M30185|CETP|1071|cholesteryl ester transfer protein, plasma##AK297699|CETP|1071|cholesteryl ester transfer protein, plasma##NM_000078|CETP|1071|cholesteryl ester transfer protein, plasma##AK291586|CETP|1071|cholesteryl ester transfer protein, plasma##BC025739|CETP|1071|cholesteryl ester transfer protein, plasma##EU176529|CETP|1071|cholesteryl ester transfer protein, plasma##BT020064|CETP|1071|cholesteryl ester transfer protein, plasma##M83573|CETP|1071|cholesteryl ester transfer protein, plasma	0.0	
chr19	15559777	15559923	reg1045375.p2	3.700	+	AK122890 TSC_hg19_v1_chr19_-_15543534	-16305	-	TSC_hg19_v1_chr19_-_15529834 NM_014371 AK295956	-30016	-	DQ891853 DQ895043 TSC_hg19_v1_chr19_-_15529792 AB015332 AB025905 AJ243467 BC000713 AK001594 AK094736 AK225046 AK225291 AK310990	-30075	-	AK131404 NM_021241 TSC_hg19_v1_chr19_-_15560872	968	-	AK024488 TSC_hg19_v1_chr19_-_15575356 AK122587 NM_022904	15517	-	BC136551 BC136552 BC144238 AF384856 AY358156 TSC_hg19_v1_chr19_-_15590313 AK289415 AB073610 AK055882 NM_052890	30409	-	AK122890|WIZ|58525|widely interspaced zinc finger motifs##NM_014371|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK295956|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##DQ891853|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##DQ895043|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AB015332|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AB025905|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AJ243467|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##BC000713|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK001594|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK094736|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK225046|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK225291|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK310990|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK131404|WIZ|58525|widely interspaced zinc finger motifs##NM_021241|WIZ|58525|widely interspaced zinc finger motifs##AK024488|RASAL3|64926|RAS protein activator like 3##AK122587|RASAL3|64926|RAS protein activator like 3##NM_022904|RASAL3|64926|RAS protein activator like 3##BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2##BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2##BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2##AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2##AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2##AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2##AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2##AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2##NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2	0.0	
chr3	179164445	179164530	reg1037791.p1	3.700	+	BC040557 NM_033540 TSC_hg19_v1_chr3_+_179065522 BC020661 AB043589 AK000700 AK314306	-98973	+	AB097862 AF003924 NM_016331	-122937	+	TSC_hg19_v1_chr3_+_179040818 BC026181	-123621	+	BC000873 TSC_hg19_v1_chr3_-_179169227 AK297174	4757	-	TSC_hg19_v1_chr3_-_179169361 AK001890 NM_021629	4878	-	TSC_hg19_v1_chr3_+_179280713 AB060168 NM_004301 NM_177989 NM_178042 AK098691 BC000949 AL136608 BC036371	116222	+	BC040557|MFN1|55669|mitofusin 1##NM_033540|MFN1|55669|mitofusin 1##BC020661|MFN1|55669|mitofusin 1##AB043589|MFN1|55669|mitofusin 1##AK000700|MFN1|55669|mitofusin 1##AK314306|MFN1|55669|mitofusin 1##AB097862|ZNF639|51193|zinc finger protein 639##AF003924|ZNF639|51193|zinc finger protein 639##NM_016331|ZNF639|51193|zinc finger protein 639##BC026181|ZNF639|51193|zinc finger protein 639##BC000873|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AK297174|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AK001890|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##NM_021629|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AB060168|ACTL6A|86|actin-like 6A##NM_004301|ACTL6A|86|actin-like 6A##NM_177989|ACTL6A|86|actin-like 6A##NM_178042|ACTL6A|86|actin-like 6A##AK098691|ACTL6A|86|actin-like 6A##BC000949|ACTL6A|86|actin-like 6A##AL136608|ACTL6A|86|actin-like 6A##BC036371|ACTL6A|86|actin-like 6A	0.773487	CTCF.p2:-9:0.773
chr4	147940538	147940661	reg1004576.p2	3.700	+	AK301807 BC024193 AK093145 AX747953 AK225725 AF345910 AK314066 NM_031956	-73601	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	-380508	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	-497603	-	NM_001166055 NM_001957 AK315931 TSC_hg19_v1_chr4_+_148402083	461476	+	TSC_hg19_v1_chr4_+_148402117 D90348 S57498 X61950	461524	+	TSC_hg19_v1_chr4_+_148402244 AK312812 BC022511 AK304451 S45956	461711	+	AK301807|TTC29|83894|tetratricopeptide repeat domain 29##BC024193|TTC29|83894|tetratricopeptide repeat domain 29##AK093145|TTC29|83894|tetratricopeptide repeat domain 29##AK225725|TTC29|83894|tetratricopeptide repeat domain 29##AF345910|TTC29|83894|tetratricopeptide repeat domain 29##AK314066|TTC29|83894|tetratricopeptide repeat domain 29##NM_031956|TTC29|83894|tetratricopeptide repeat domain 29##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001166055|EDNRA|1909|endothelin receptor type A##NM_001957|EDNRA|1909|endothelin receptor type A##AK315931|EDNRA|1909|endothelin receptor type A##D90348|EDNRA|1909|endothelin receptor type A##S57498|EDNRA|1909|endothelin receptor type A##X61950|EDNRA|1909|endothelin receptor type A##AK312812|EDNRA|1909|endothelin receptor type A##BC022511|EDNRA|1909|endothelin receptor type A##AK304451|EDNRA|1909|endothelin receptor type A##S45956|EDNRA|1909|endothelin receptor type A	0.0	
chr6	116768655	116768798	reg1039924.p1	3.700	+	TSC_hg19_v1_chr6_-_116692863 AK298559 AK316303	-75857	-	TSC_hg19_v1_chr6_+_116692109 NM_013352 AF098066	-76583	+	BC039245 NM_001080976 BC043526	-167405	+	NM_001010919	13829	+	BC032556 NM_153711 AK094140 AK315572	64095	+	AK300309 AY358252 NM_153036 BC057769 AK056801	81482	+	AK298559|LOC100287467|100287467|uncharacterized LOC100287467##AK316303|LOC100287467|100287467|uncharacterized LOC100287467##NM_013352|DSE|29940|dermatan sulfate epimerase##AF098066|DSE|29940|dermatan sulfate epimerase##BC039245|DSE|29940|dermatan sulfate epimerase##NM_001080976|DSE|29940|dermatan sulfate epimerase##BC043526|DSE|29940|dermatan sulfate epimerase##NM_001010919|FAM26F|441168|family with sequence similarity 26, member F##BC032556|FAM26E|254228|family with sequence similarity 26, member E##NM_153711|FAM26E|254228|family with sequence similarity 26, member E##AK094140|FAM26E|254228|family with sequence similarity 26, member E##AK315572|FAM26E|254228|family with sequence similarity 26, member E##AK300309|FAM26D|221301|family with sequence similarity 26, member D##AY358252|FAM26D|221301|family with sequence similarity 26, member D##NM_153036|FAM26D|221301|family with sequence similarity 26, member D##BC057769|FAM26D|221301|family with sequence similarity 26, member D##AK056801|FAM26D|221301|family with sequence similarity 26, member D	0.0	
chr6	18211683	18211824	reg1031903.p1	3.700	+	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	-56098	+	S62904 AK310420 TSC_hg19_v1_chr6_-_18155309 U12387 BC005339 BC009596 NM_000367	-56425	-	AY324850 BC103888 BC103889 BC103890 NM_198586	-88903	-	X64229 TSC_hg19_v1_chr6_-_18264759 BC012442 AK312616 AK298089 AK294079 BC035259 AK297749 NM_001134709 NM_003472	52968	-	AK096832 NM_182757 AB076367 BC063311 AL832329	175914	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	1625882	+	BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B##S62904|TPMT|7172|thiopurine S-methyltransferase##AK310420|TPMT|7172|thiopurine S-methyltransferase##U12387|TPMT|7172|thiopurine S-methyltransferase##BC005339|TPMT|7172|thiopurine S-methyltransferase##BC009596|TPMT|7172|thiopurine S-methyltransferase##NM_000367|TPMT|7172|thiopurine S-methyltransferase##AY324850|NHLRC1|378884|NHL repeat containing 1##BC103888|NHLRC1|378884|NHL repeat containing 1##BC103889|NHLRC1|378884|NHL repeat containing 1##BC103890|NHLRC1|378884|NHL repeat containing 1##NM_198586|NHLRC1|378884|NHL repeat containing 1##X64229|DEK|7913|DEK oncogene##BC012442|DEK|7913|DEK oncogene##AK312616|DEK|7913|DEK oncogene##AK298089|DEK|7913|DEK oncogene##AK294079|DEK|7913|DEK oncogene##BC035259|DEK|7913|DEK oncogene##AK297749|DEK|7913|DEK oncogene##NM_001134709|DEK|7913|DEK oncogene##NM_003472|DEK|7913|DEK oncogene##AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein	0.0	
chr6	231861	232030	reg1036307.p1	3.700	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	60140	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	60552	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	159819	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.0	
chr7	17199164	17199345	reg1029140.p1	3.700	+	AY359065 BC058284 NM_176813	-277650	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-354583	-	TSC_hg19_v1_chr7_+_16793401 AK093487 NM_014399 AK026587 AK075475 AK316595 AY358995 AF100759 BC033863 AF120265 DQ892059 DQ895252 CR542107	-405798	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	139015	+	TSC_hg19_v1_chr7_+_17382906 BC021696	183652	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	780795	-	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK093487|TSPAN13|27075|tetraspanin 13##NM_014399|TSPAN13|27075|tetraspanin 13##AK026587|TSPAN13|27075|tetraspanin 13##AK075475|TSPAN13|27075|tetraspanin 13##AK316595|TSPAN13|27075|tetraspanin 13##AY358995|TSPAN13|27075|tetraspanin 13##AF100759|TSPAN13|27075|tetraspanin 13##BC033863|TSPAN13|27075|tetraspanin 13##AF120265|TSPAN13|27075|tetraspanin 13##DQ892059|TSPAN13|27075|tetraspanin 13##DQ895252|TSPAN13|27075|tetraspanin 13##CR542107|TSPAN13|27075|tetraspanin 13##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13	0.0	
chr7	17274178	17274272	reg1025266.p1	3.700	+	AY359065 BC058284 NM_176813	-352621	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-429554	-	TSC_hg19_v1_chr7_+_16793401 AK093487 NM_014399 AK026587 AK075475 AK316595 AY358995 AF100759 BC033863 AF120265 DQ892059 DQ895252 CR542107	-480769	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	64044	+	TSC_hg19_v1_chr7_+_17382906 BC021696	108681	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	705824	-	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK093487|TSPAN13|27075|tetraspanin 13##NM_014399|TSPAN13|27075|tetraspanin 13##AK026587|TSPAN13|27075|tetraspanin 13##AK075475|TSPAN13|27075|tetraspanin 13##AK316595|TSPAN13|27075|tetraspanin 13##AY358995|TSPAN13|27075|tetraspanin 13##AF100759|TSPAN13|27075|tetraspanin 13##BC033863|TSPAN13|27075|tetraspanin 13##AF120265|TSPAN13|27075|tetraspanin 13##DQ892059|TSPAN13|27075|tetraspanin 13##DQ895252|TSPAN13|27075|tetraspanin 13##CR542107|TSPAN13|27075|tetraspanin 13##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13	0.0	
chrX	129254462	129254606	reg1020029.p1	3.700	+	BC017194 AK314972 NM_001127197 TSC_hg19_v1_chrX_-_129244713	-9847	-	TSC_hg19_v1_chrX_-_129244474 NM_001421	-10056	-	TSC_hg19_v1_chrX_-_129244438 U32645	-10090	-	DQ016496 NM_001130846	17480	-	CR457379 DQ016498 DQ016500 AL049704 AK314446 TSC_hg19_v1_chrX_-_129299669 AF100928	45118	-	TSC_hg19_v1_chrX_-_129299743 AK000775 AL049703 BC139738	45188	-	BC017194|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##AK314972|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001127197|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001421|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##U32645|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##DQ016496|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_001130846|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##CR457379|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##DQ016498|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##DQ016500|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AL049704|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AK314446|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AF100928|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AK000775|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AL049703|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##BC139738|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1	0.0	
chr10	25012945	25013012	reg1037182.p1	3.699	+	AF480466 NM_020824 TSC_hg19_v1_chr10_-_25012632	-372	-	AK307604 TSC_hg19_v1_chr10_-_25012174	-805	-	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	-257509	+	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	228554	-	CU693144 DQ892076 DQ895269 BC064597 AK095021 NM_145010 AY454125 AK292495 BC026165	291996	-	NM_024838 TSC_hg19_v1_chr10_+_25305540 AK125249 BC035132 BX647989	292572	+	AF480466|ARHGAP21|57584|Rho GTPase activating protein 21##NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21##BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##DQ892076|ENKUR|219670|enkurin, TRPC channel interacting protein##DQ895269|ENKUR|219670|enkurin, TRPC channel interacting protein##AK095021|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_145010|ENKUR|219670|enkurin, TRPC channel interacting protein##AY454125|ENKUR|219670|enkurin, TRPC channel interacting protein##AK292495|ENKUR|219670|enkurin, TRPC channel interacting protein##BC026165|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_024838|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AK125249|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BC035132|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BX647989|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)	0.0	
chr11	13300743	13300864	reg1041208.p2	3.699	+	TSC_hg19_v1_chr11_+_13299403 BC031214 BC034314	-1348	+	TSC_hg19_v1_chr11_+_13299376 AF044288 AK095749	-1421	+	TSC_hg19_v1_chr11_+_13299375 U60415	-1430	+	AK298226 TSC_hg19_v1_chr11_-_13484770 AK310935 AK292392 AK095946 BC005071 AL832981 NM_032320 AF329102	183988	-	V00597 BC096142 BC096143 BC096144 BC096145 NM_000315	216742	-	TSC_hg19_v1_chr11_+_13690212 NM_032228 AY358784	389387	+	BC031214|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AF044288|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK095749|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##U60415|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK298226|BTBD10|84280|BTB (POZ) domain containing 10##AK310935|BTBD10|84280|BTB (POZ) domain containing 10##AK292392|BTBD10|84280|BTB (POZ) domain containing 10##AK095946|BTBD10|84280|BTB (POZ) domain containing 10##BC005071|BTBD10|84280|BTB (POZ) domain containing 10##AL832981|BTBD10|84280|BTB (POZ) domain containing 10##NM_032320|BTBD10|84280|BTB (POZ) domain containing 10##AF329102|BTBD10|84280|BTB (POZ) domain containing 10##V00597|PTH|5741|parathyroid hormone##BC096142|PTH|5741|parathyroid hormone##BC096143|PTH|5741|parathyroid hormone##BC096144|PTH|5741|parathyroid hormone##BC096145|PTH|5741|parathyroid hormone##NM_000315|PTH|5741|parathyroid hormone##NM_032228|FAR1|84188|fatty acyl CoA reductase 1##AY358784|FAR1|84188|fatty acyl CoA reductase 1	0.0	
chr12	109027578	109027758	reg1040775.p2	3.699	+	TSC_hg19_v1_chr12_-_109027671 AK127638 AK298738 AK098315 NM_003006	-6	-	TSC_hg19_v1_chr12_-_109027639 AK300057 AK290395 BC029782	-35	-	AK225644 U02297 AK295238 TSC_hg19_v1_chr12_-_109027584	-94	-	TSC_hg19_v1_chr12_-_109125268 AL162070 AK297463	97595	-	TSC_hg19_v1_chr12_-_109125284 BC002342 AB209909	97612	-	TSC_hg19_v1_chr12_-_109125295 AK023205 AK223073 AK304839 AK311315 AK316065 AB030656 NM_014325	97624	-	AK127638|SELPLG|6404|selectin P ligand##AK098315|SELPLG|6404|selectin P ligand##NM_003006|SELPLG|6404|selectin P ligand##AK290395|SELPLG|6404|selectin P ligand##BC029782|SELPLG|6404|selectin P ligand##AK225644|SELPLG|6404|selectin P ligand##U02297|SELPLG|6404|selectin P ligand##AK295238|SELPLG|6404|selectin P ligand##AL162070|CORO1C|23603|coronin, actin binding protein, 1C##AK297463|CORO1C|23603|coronin, actin binding protein, 1C##BC002342|CORO1C|23603|coronin, actin binding protein, 1C##AB209909|CORO1C|23603|coronin, actin binding protein, 1C##AK023205|CORO1C|23603|coronin, actin binding protein, 1C##AK223073|CORO1C|23603|coronin, actin binding protein, 1C##AK304839|CORO1C|23603|coronin, actin binding protein, 1C##AK311315|CORO1C|23603|coronin, actin binding protein, 1C##AK316065|CORO1C|23603|coronin, actin binding protein, 1C##AB030656|CORO1C|23603|coronin, actin binding protein, 1C##NM_014325|CORO1C|23603|coronin, actin binding protein, 1C	0.0	
chr1	236444071	236444171	reg1038216.p1	3.699	+	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	-138245	+	TSC_hg19_v1_chr1_-_236228670 BC012501	-215381	-	TSC_hg19_v1_chr1_-_236228496 AK297234	-215623	-	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	1067	-	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	1195	-	AK290862 AY028913 NM_145861 BC106873 BC106874 BC114557 BC114560 BC128082	113562	+	BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##BC012501|NID1|4811|nidogen 1##AK297234|NID1|4811|nidogen 1##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK290862|EDARADD|128178|EDAR-associated death domain##AY028913|EDARADD|128178|EDAR-associated death domain##NM_145861|EDARADD|128178|EDAR-associated death domain##BC114557|EDARADD|128178|EDAR-associated death domain##BC114560|EDARADD|128178|EDAR-associated death domain##BC128082|EDARADD|128178|EDAR-associated death domain	0.0	
chr16	57411359	57411539	reg1031620.p2	3.699	+	TSC_hg19_v1_chr16_+_57406401 AK223351 AK313806 U84487 U91835 BC001163 BC016164 NM_002996 AB590256 DQ890704 DQ891871 DQ893888 DQ895059 CU674588 CR457426	-5010	+	AK222692 TSC_hg19_v1_chr16_+_57406382	-5064	+	NM_002990 AK311970 U83171 U83239 BC027952 CU693342 AB590299 DQ890922 DQ893311 DQ894072 DQ896625 EU176526	-18739	+	BC069107 NM_002987 BC112066 BC112068	27246	+	BC036316 TSC_hg19_v1_chr16_-_57481298 AK074263 BC002568 AK292281 AL136613 BC071740 BC024196 AF248964 NM_020313 BC067303	69905	-	AK075438 NM_020312 TSC_hg19_v1_chr16_+_57481390 AK295793 BC064946 AK293585 BC029341 BC054340 AF161444 AK290627 AK303527 CU687976 EU832506 EU832587	69927	+	AK223351|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK313806|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U84487|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U91835|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC001163|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC016164|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002996|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ890704|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ891871|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ893888|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ895059|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##CR457426|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK222692|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002990|CCL22|6367|chemokine (C-C motif) ligand 22##AK311970|CCL22|6367|chemokine (C-C motif) ligand 22##U83171|CCL22|6367|chemokine (C-C motif) ligand 22##U83239|CCL22|6367|chemokine (C-C motif) ligand 22##BC027952|CCL22|6367|chemokine (C-C motif) ligand 22##DQ890922|CCL22|6367|chemokine (C-C motif) ligand 22##DQ893311|CCL22|6367|chemokine (C-C motif) ligand 22##DQ894072|CCL22|6367|chemokine (C-C motif) ligand 22##DQ896625|CCL22|6367|chemokine (C-C motif) ligand 22##EU176526|CCL22|6367|chemokine (C-C motif) ligand 22##BC069107|CCL17|6361|chemokine (C-C motif) ligand 17##NM_002987|CCL17|6361|chemokine (C-C motif) ligand 17##BC112066|CCL17|6361|chemokine (C-C motif) ligand 17##BC112068|CCL17|6361|chemokine (C-C motif) ligand 17##AK074263|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC002568|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK292281|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AL136613|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC071740|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC024196|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AF248964|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##NM_020313|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##BC067303|CIAPIN1|57019|cytokine induced apoptosis inhibitor 1##AK075438|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##NM_020312|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK295793|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC064946|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK293585|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC029341|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##BC054340|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AF161444|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK290627|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##AK303527|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832506|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)##EU832587|COQ9|57017|coenzyme Q9 homolog (S. cerevisiae)	0.0	
chr18	60845917	60846098	reg1034286.p2	3.699	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-50072	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-461699	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-462081	+	BC027258 NM_000633 NM_000657	140553	-	TSC_hg19_v1_chr18_-_60986977 X06487	140986	-	TSC_hg19_v1_chr18_-_60987309 M13994	141279	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr19	2740201	2740278	reg1030637.p1	3.699	+	TSC_hg19_v1_chr19_-_2740065 NM_144564 NM_213568	-172	-	TSC_hg19_v1_chr19_-_2740016 AK302600 BC020571 AK002044	-211	-	TSC_hg19_v1_chr19_-_2740007 BC005869	-235	-	TSC_hg19_v1_chr19_-_2783272 AJ133129 BC005165 BC008885 BC000390 BC002989	43023	-	TSC_hg19_v1_chr19_-_2783313 AL050156	43075	-	AK293535 TSC_hg19_v1_chr19_-_2783326	43088	-	NM_144564|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##NM_213568|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##AK302600|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##BC020571|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##AK002044|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##BC005869|SLC39A3|29985|solute carrier family 39 (zinc transporter), member 3##AJ133129|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##BC005165|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##BC008885|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##BC000390|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##BC002989|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##AL050156|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##AK293535|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha	0.025782	
chr19	54902601	54902695	reg1011409.p1	3.699	+	AK303261 TSC_hg19_v1_chr19_-_54882123 AK097869	-20556	-	TSC_hg19_v1_chr19_-_54876672 NM_002287 NM_021706	-25953	-	TSC_hg19_v1_chr19_-_54876541 AK290415 AK315419	-26097	-	AB188496 NM_001005367 NM_001201461 NM_020659 TSC_hg19_v1_chr19_+_54926657 AK289468 AK293468 BC065919 AF177909 BC011347	24003	+	AB162930 TSC_hg19_v1_chr19_+_54926723	24074	+	NM_052925	57416	+	AK303261|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK097869|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##NM_002287|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##NM_021706|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK290415|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK315419|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AB188496|TTYH1|57348|tweety homolog 1 (Drosophila)##NM_001005367|TTYH1|57348|tweety homolog 1 (Drosophila)##NM_001201461|TTYH1|57348|tweety homolog 1 (Drosophila)##NM_020659|TTYH1|57348|tweety homolog 1 (Drosophila)##AK289468|TTYH1|57348|tweety homolog 1 (Drosophila)##AK293468|TTYH1|57348|tweety homolog 1 (Drosophila)##BC065919|TTYH1|57348|tweety homolog 1 (Drosophila)##AF177909|TTYH1|57348|tweety homolog 1 (Drosophila)##BC011347|TTYH1|57348|tweety homolog 1 (Drosophila)##AB162930|TTYH1|57348|tweety homolog 1 (Drosophila)##NM_052925|LENG8|114823|leukocyte receptor cluster (LRC) member 8	0.0	
chr20	48285153	48285333	reg1034223.p2	3.699	+	AF297048 AF297049 AF297050 AF297051 AF297052 D38145 NM_000961 BC101809 BC101811 BC143381	-100554	-	BC110572 BC110573 NM_004975	-186064	-	BC062222 BC105282 TSC_hg19_v1_chr20_+_47895178 BC060315 BC032480 AY339614	-390048	+	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	44987	-	AB004550 TSC_hg19_v1_chr20_-_48330359	45113	-	TSC_hg19_v1_chr20_-_48330471 NM_004776	45223	-	AF297048|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297049|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297050|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297051|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##AF297052|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##D38145|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##NM_000961|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101809|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC101811|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC143381|PTGIS|5740|prostaglandin I2 (prostacyclin) synthase##BC110572|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC110573|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##NM_004975|KCNB1|3745|potassium voltage-gated channel, Shab-related subfamily, member 1##BC062222|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC105282|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC060315|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##BC032480|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##AY339614|ZNFX1-AS1|441951|ZNFX1 antisense RNA 1 (non-protein coding)##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5	0.0	
chr3	111834334	111834467	reg1031848.p2	3.699	+	TSC_hg19_v1_chr3_+_111805267 AK303588 NM_001171747 NM_024616 AY830714 AK026839 BC017064 AK298076	-29172	+	AK131211 NM_001042575 BC117322	-75892	+	NM_001008273 BC004477 TSC_hg19_v1_chr3_+_111718179 AF112201 BT007408 CU677265	-116263	+	CU688884 BC030506 AY212246 AK313368 AK128276 AF521911 NM_001190259 NM_001190260 NM_152785	17659	-	BC044801 NM_183061 AK128084	178688	-	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	217558	+	AK303588|C3orf52|79669|chromosome 3 open reading frame 52##NM_001171747|C3orf52|79669|chromosome 3 open reading frame 52##NM_024616|C3orf52|79669|chromosome 3 open reading frame 52##AY830714|C3orf52|79669|chromosome 3 open reading frame 52##AK026839|C3orf52|79669|chromosome 3 open reading frame 52##BC017064|C3orf52|79669|chromosome 3 open reading frame 52##AK298076|C3orf52|79669|chromosome 3 open reading frame 52##AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7##NM_001008273|TAGLN3|29114|transgelin 3##AF112201|TAGLN3|29114|transgelin 3##BT007408|TAGLN3|29114|transgelin 3##BC030506|GCET2|257144|germinal center expressed transcript 2##AY212246|GCET2|257144|germinal center expressed transcript 2##AK313368|GCET2|257144|germinal center expressed transcript 2##AF521911|GCET2|257144|germinal center expressed transcript 2##NM_001190259|GCET2|257144|germinal center expressed transcript 2##NM_001190260|GCET2|257144|germinal center expressed transcript 2##NM_152785|GCET2|257144|germinal center expressed transcript 2##BC044801|SLC9A10|285335|solute carrier family 9, member 10##NM_183061|SLC9A10|285335|solute carrier family 9, member 10##AK128084|SLC9A10|285335|solute carrier family 9, member 10##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule	0.0	
chr6	157088995	157089167	reg1030409.p1	3.699	+	AF190122 NM_015718	-1312045	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1453458	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1453496	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	9982	+	TSC_hg19_v1_chr6_+_157099206 AB587572	10144	+	TSC_hg19_v1_chr6_+_157099283 AF521671	10203	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.0	
chr7	35873124	35873196	reg1042286.p2	3.699	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	-32308	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	-32327	+	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	-32450	+	TSC_hg19_v1_chr7_+_36192789 NM_030636	319645	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	319723	+	TSC_hg19_v1_chr7_+_36193025 AB051493	319895	+	DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##NM_030636|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1	0.0	
chr8	110656435	110656501	reg1028389.p2	3.699	+	NM_001099756	-1050	-	AK297182 TSC_hg19_v1_chr8_-_110620232	-36242	-	NM_004215 BC005249 BC022506 AK308950 AB007619 AF006265 AY515724	-104058	+	AY705385 AB384607 TSC_hg19_v1_chr8_-_110656972	461	-	BC012082 AK090559 AK096558 TSC_hg19_v1_chr8_-_110657047 NM_001099753 NM_001099754 NM_001099755	569	-	AK055246 NM_001099751 NM_001099752	1315	-	NM_001099756|SYBU|55638|syntabulin (syntaxin-interacting)##AK297182|SYBU|55638|syntabulin (syntaxin-interacting)##NM_004215|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC005249|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC022506|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK308950|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AB007619|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AF006265|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AY515724|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AY705385|SYBU|55638|syntabulin (syntaxin-interacting)##BC012082|SYBU|55638|syntabulin (syntaxin-interacting)##AK090559|SYBU|55638|syntabulin (syntaxin-interacting)##AK096558|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099753|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099754|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099755|SYBU|55638|syntabulin (syntaxin-interacting)##AK055246|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099751|SYBU|55638|syntabulin (syntaxin-interacting)##NM_001099752|SYBU|55638|syntabulin (syntaxin-interacting)	0.0	
chr8	38592282	38592353	reg1037904.p1	3.699	+	BX647696 NM_001146216	-6614	+	BC137511 BC137512 BC139744 AK125570 NM_207412	-206141	-	FJ809916 FJ809917 NM_001174063 NM_001174064 NM_015850 NM_023105 NM_023106 NM_023110	-265966	-	AY072874 AY072875 TSC_hg19_v1_chr8_+_38614814 AK308849	22469	+	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	52405	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	52451	+	BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1##BC137511|C8orf86|389649|chromosome 8 open reading frame 86##BC137512|C8orf86|389649|chromosome 8 open reading frame 86##BC139744|C8orf86|389649|chromosome 8 open reading frame 86##AK125570|C8orf86|389649|chromosome 8 open reading frame 86##NM_207412|C8orf86|389649|chromosome 8 open reading frame 86##FJ809916|FGFR1|2260|fibroblast growth factor receptor 1##FJ809917|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174063|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174064|FGFR1|2260|fibroblast growth factor receptor 1##NM_015850|FGFR1|2260|fibroblast growth factor receptor 1##NM_023105|FGFR1|2260|fibroblast growth factor receptor 1##NM_023106|FGFR1|2260|fibroblast growth factor receptor 1##NM_023110|FGFR1|2260|fibroblast growth factor receptor 1##AY072874|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072875|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK308849|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1	0.040705	
chrX	18408206	18408298	reg1001329.p1	3.699	+	Y18004 BC051913 TSC_hg19_v1_chrX_-_18372809 BC064617 AK303064 AK315116 BC040497 NM_006089	-35442	-	DQ892470 DQ895683 BC096745 BC037301 AK128155 NM_001184767 NM_153346	-169304	-	AK056214 AK298873 AK314631 NM_001172732 NM_001172739 NM_001172743 NM_021785	-528847	-	BC010966 TSC_hg19_v1_chrX_+_18443727 NM_003159 AK307444 AY217744 Y15057	35477	+	BC036091 NM_001037343	52091	+	AB464151 AF014459 DQ426892 NM_000330	281952	-	Y18004|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC051913|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC064617|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK303064|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK315116|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC040497|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##NM_006089|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##DQ892470|BEND2|139105|BEN domain containing 2##DQ895683|BEND2|139105|BEN domain containing 2##BC096745|BEND2|139105|BEN domain containing 2##BC037301|BEND2|139105|BEN domain containing 2##AK128155|BEND2|139105|BEN domain containing 2##NM_001184767|BEND2|139105|BEN domain containing 2##NM_153346|BEND2|139105|BEN domain containing 2##AK056214|RAI2|10742|retinoic acid induced 2##AK298873|RAI2|10742|retinoic acid induced 2##AK314631|RAI2|10742|retinoic acid induced 2##NM_001172732|RAI2|10742|retinoic acid induced 2##NM_001172739|RAI2|10742|retinoic acid induced 2##NM_001172743|RAI2|10742|retinoic acid induced 2##NM_021785|RAI2|10742|retinoic acid induced 2##BC010966|CDKL5|6792|cyclin-dependent kinase-like 5##NM_003159|CDKL5|6792|cyclin-dependent kinase-like 5##AK307444|CDKL5|6792|cyclin-dependent kinase-like 5##AY217744|CDKL5|6792|cyclin-dependent kinase-like 5##Y15057|CDKL5|6792|cyclin-dependent kinase-like 5##BC036091|CDKL5|6792|cyclin-dependent kinase-like 5##NM_001037343|CDKL5|6792|cyclin-dependent kinase-like 5##AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1	0.989208	CTCF.p2:11:0.989
chr11	66278016	66278152	reg1038485.p2	3.698	+	TSC_hg19_v1_chr11_+_66247908 AK021449 AK222847 AK297199 AK222566 AK304581 BC014038 BC001446	-30170	+	TSC_hg19_v1_chr11_+_66247882 AL833475 NM_005700 NM_130443 BC007221	-30194	+	TSC_hg19_v1_chr11_+_66234371 NM_001098510 NM_001243136 NM_145065 AL834395 BC021256 AK074201 BC025723	-43731	+	AK095638 TSC_hg19_v1_chr11_+_66278105 BX647612 AK294962 AK302657 AK296311 BC047642 AF503941 NM_024649 BC109064 BC109065	32	+	CU691266 TSC_hg19_v1_chr11_-_66313501 BC057833	35403	-	TSC_hg19_v1_chr11_-_66313539 AY358448 NM_207340 AK301787 AK310561	35523	-	AK021449|DPP3|10072|dipeptidyl-peptidase 3##AK222847|DPP3|10072|dipeptidyl-peptidase 3##AK297199|DPP3|10072|dipeptidyl-peptidase 3##AK222566|DPP3|10072|dipeptidyl-peptidase 3##AK304581|DPP3|10072|dipeptidyl-peptidase 3##BC014038|DPP3|10072|dipeptidyl-peptidase 3##BC001446|DPP3|10072|dipeptidyl-peptidase 3##AL833475|DPP3|10072|dipeptidyl-peptidase 3##NM_005700|DPP3|10072|dipeptidyl-peptidase 3##NM_130443|DPP3|10072|dipeptidyl-peptidase 3##BC007221|DPP3|10072|dipeptidyl-peptidase 3##NM_001098510|PELI3|246330|pellino homolog 3 (Drosophila)##NM_001243136|PELI3|246330|pellino homolog 3 (Drosophila)##NM_145065|PELI3|246330|pellino homolog 3 (Drosophila)##AL834395|PELI3|246330|pellino homolog 3 (Drosophila)##BC021256|PELI3|246330|pellino homolog 3 (Drosophila)##AK074201|PELI3|246330|pellino homolog 3 (Drosophila)##BC025723|PELI3|246330|pellino homolog 3 (Drosophila)##AK095638|BBS1|582|Bardet-Biedl syndrome 1##BX647612|BBS1|582|Bardet-Biedl syndrome 1##AK294962|BBS1|582|Bardet-Biedl syndrome 1##AK302657|BBS1|582|Bardet-Biedl syndrome 1##AK296311|BBS1|582|Bardet-Biedl syndrome 1##BC047642|BBS1|582|Bardet-Biedl syndrome 1##AF503941|BBS1|582|Bardet-Biedl syndrome 1##NM_024649|BBS1|582|Bardet-Biedl syndrome 1##BC109064|BBS1|582|Bardet-Biedl syndrome 1##BC109065|BBS1|582|Bardet-Biedl syndrome 1##BC057833|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AY358448|ZDHHC24|254359|zinc finger, DHHC-type containing 24##NM_207340|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AK301787|ZDHHC24|254359|zinc finger, DHHC-type containing 24##AK310561|ZDHHC24|254359|zinc finger, DHHC-type containing 24	0.0	
chr11	82782837	82782946	reg1035224.p1	3.698	+	AK312323 TSC_hg19_v1_chr11_-_82782872	-18	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	-170117	+	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	-171374	-	BC014213 NM_014488 TSC_hg19_v1_chr11_-_82782897 BX641138	6	-	BC031316 TSC_hg19_v1_chr11_+_82783118	227	+	NM_015885 TSC_hg19_v1_chr11_+_82868196 AK302606 AF046935 AK025103 AB020631 BC146778 BC110432 BC065384	85514	+	AK312323|RAB30|27314|RAB30, member RAS oncogene family##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC014213|RAB30|27314|RAB30, member RAS oncogene family##NM_014488|RAB30|27314|RAB30, member RAS oncogene family##BX641138|RAB30|27314|RAB30, member RAS oncogene family##BC031316|LOC100506233|100506233|uncharacterized LOC100506233##NM_015885|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK302606|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AF046935|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK025103|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AB020631|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC146778|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC110432|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC065384|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)	0.029657	
chr11	9386140	9386320	reg1038412.p2	3.698	+	TSC_hg19_v1_chr11_-_9336182 BC044597 BC035034 NM_001165030 NM_015012	-49993	-	TSC_hg19_v1_chr11_-_9336141 D26067	-50092	-	AK303339 TSC_hg19_v1_chr11_-_9336043 BC064366 BC091524	-50171	-	TSC_hg19_v1_chr11_+_9406165 NM_006391	19922	+	AK312885 TSC_hg19_v1_chr11_+_9406199 AF098799 BC114929	19990	+	BC004388 TSC_hg19_v1_chr11_-_9482148 BC036621	95898	-	BC044597|TMEM41B|440026|transmembrane protein 41B##BC035034|TMEM41B|440026|transmembrane protein 41B##NM_001165030|TMEM41B|440026|transmembrane protein 41B##NM_015012|TMEM41B|440026|transmembrane protein 41B##D26067|TMEM41B|440026|transmembrane protein 41B##AK303339|TMEM41B|440026|transmembrane protein 41B##BC064366|TMEM41B|440026|transmembrane protein 41B##BC091524|TMEM41B|440026|transmembrane protein 41B##NM_006391|IPO7|10527|importin 7##AK312885|IPO7|10527|importin 7##AF098799|IPO7|10527|importin 7##BC114929|IPO7|10527|importin 7##BC004388|LOC644656|644656|uncharacterized LOC644656##BC036621|LOC644656|644656|uncharacterized LOC644656	0.0	
chr12	81651879	81651979	reg1040666.p2	3.698	+	TSC_hg19_v1_chr12_+_81471857 BC009317 BC015769 NM_024560 AK025616 AX764482	-180071	+	TSC_hg19_v1_chr12_-_81331487 AB528898 CR407680 BC099921 AK315321 BC046926 BC062332 BC118609 BC122561 AF087693 AF173081 NM_004664	-320339	-	TSC_hg19_v1_chr12_-_81331470 AK309256	-320462	-	AK123372 AK296380 NM_001220479 NM_001220480	111230	-	AK294505 AK297372 AK299853 NM_001220477 NM_001220478	340125	-	BC104912 BC143485 NM_001220475 NM_001220476 AK126971 TSC_hg19_v1_chr12_-_82152435 AB210009 NM_001220473 NM_001220474	500442	-	BC009317|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##BC015769|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##NM_024560|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AK025616|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##AX764482|ACSS3|79611|acyl-CoA synthetase short-chain family member 3##CR407680|LIN7A|8825|lin-7 homolog A (C. elegans)##BC099921|LIN7A|8825|lin-7 homolog A (C. elegans)##AK315321|LIN7A|8825|lin-7 homolog A (C. elegans)##BC046926|LIN7A|8825|lin-7 homolog A (C. elegans)##BC062332|LIN7A|8825|lin-7 homolog A (C. elegans)##BC118609|LIN7A|8825|lin-7 homolog A (C. elegans)##BC122561|LIN7A|8825|lin-7 homolog A (C. elegans)##AF087693|LIN7A|8825|lin-7 homolog A (C. elegans)##AF173081|LIN7A|8825|lin-7 homolog A (C. elegans)##NM_004664|LIN7A|8825|lin-7 homolog A (C. elegans)##AK309256|LIN7A|8825|lin-7 homolog A (C. elegans)##AK123372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK296380|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220479|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220480|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC104912|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC143485|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220475|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220476|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK126971|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AB210009|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220473|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220474|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	0.891332	CTCF.p2:-2:0.891
chr13	26760781	26760885	reg1032644.p2	3.698	+	BC132898 BC137092 AY358775 NM_001007538	-135653	-	AK302980 TSC_hg19_v1_chr13_+_26042965	-717868	+	TSC_hg19_v1_chr13_+_26042926 AK126031	-717904	+	AL133621 TSC_hg19_v1_chr13_-_26789203	28302	-	TSC_hg19_v1_chr13_-_26795853 AY009109 NM_183044	35024	-	BC034688 TSC_hg19_v1_chr13_-_26795942 AK293272 AJ010347 NM_183043	35144	-	BC132898|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##BC137092|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AY358775|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##NM_001007538|SHISA2|387914|shisa homolog 2 (Xenopus laevis)##AK302980|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AK126031|ATP8A2|51761|ATPase, aminophospholipid transporter, class I, type 8A, member 2##AL133621|RNF6|6049|ring finger protein (C3H2C3 type) 6##AY009109|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183044|RNF6|6049|ring finger protein (C3H2C3 type) 6##BC034688|RNF6|6049|ring finger protein (C3H2C3 type) 6##AK293272|RNF6|6049|ring finger protein (C3H2C3 type) 6##AJ010347|RNF6|6049|ring finger protein (C3H2C3 type) 6##NM_183043|RNF6|6049|ring finger protein (C3H2C3 type) 6	0.0	
chr13	95953066	95953196	reg1031849.p1	3.698	+	X65666 X71136 AB464716 NM_007084	-588813	-	TSC_hg19_v1_chr13_+_95254110 NM_180989 BC033906 BC052243 AK126794	-699029	+	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	-704635	-	AF541977 AY207008 AY081219 AY133678 AY133679 AY133680 TSC_hg19_v1_chr13_-_95953688 AK298953 BC041560 AF071202 AK296247 NM_001105515 NM_005845 AK290317	581	-	NM_001160100 NM_182848 AK055855	132723	+	TSC_hg19_v1_chr13_+_96204946 NM_006984 BC010920 U89916 AK315737 DQ892831 DQ896077 CR456845	251843	+	X65666|SOX21|11166|SRY (sex determining region Y)-box 21##X71136|SOX21|11166|SRY (sex determining region Y)-box 21##NM_007084|SOX21|11166|SRY (sex determining region Y)-box 21##NM_180989|GPR180|160897|G protein-coupled receptor 180##BC033906|GPR180|160897|G protein-coupled receptor 180##BC052243|GPR180|160897|G protein-coupled receptor 180##AK126794|GPR180|160897|G protein-coupled receptor 180##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase##AF541977|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY207008|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY081219|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133678|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133679|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AY133680|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK298953|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##BC041560|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AF071202|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK296247|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001105515|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_005845|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##AK290317|ABCC4|10257|ATP-binding cassette, sub-family C (CFTR/MRP), member 4##NM_001160100|CLDN10|9071|claudin 10##NM_182848|CLDN10|9071|claudin 10##AK055855|CLDN10|9071|claudin 10##NM_006984|CLDN10|9071|claudin 10##BC010920|CLDN10|9071|claudin 10##U89916|CLDN10|9071|claudin 10##AK315737|CLDN10|9071|claudin 10##DQ892831|CLDN10|9071|claudin 10##DQ896077|CLDN10|9071|claudin 10##CR456845|CLDN10|9071|claudin 10	0.0	
chr14	75943387	75943542	reg1033942.p1	3.698	+	BC051303 NM_001135049	-44628	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	-48451	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	-48823	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	45326	+	TSC_hg19_v1_chr14_+_75988840 D42106	45388	+	NM_017791 AY260572 AY260577 BC019087 AK000378	101501	+	BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	0.0	
chr15	100466372	100466482	reg1041710.p1	3.698	+	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-192793	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-192823	-	TSC_hg19_v1_chr15_-_100273591 BC084545 AK124852	-192861	-	AB527357 AJ315735 NM_139057	415716	-	BC034500 BC034970 NM_178842	618470	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	675982	-	BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC084545|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK124852|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)	0.0	
chr16	3108793	3108878	reg1004049.p1	3.698	+	AJ272137 NM_022468 AJ239053 AB042328 AF145442 AF185270	-12048	+	BC128602 NM_001103175	-23294	-	BC064026 BC065514 NM_001002017 NM_001002018 NM_017885	-34580	-	BC026114 BC045731 TSC_hg19_v1_chr16_-_3109353	522	-	BC009401 NM_001012631 NM_001012633 NM_001012718 NM_004221 AY495331 AY495332 AY495333 AK307158 TSC_hg19_v1_chr16_+_3115358 FJ985780	6511	+	NM_001012635 TSC_hg19_v1_chr16_+_3115631	6786	+	AJ272137|MMP25|64386|matrix metallopeptidase 25##NM_022468|MMP25|64386|matrix metallopeptidase 25##AJ239053|MMP25|64386|matrix metallopeptidase 25##AB042328|MMP25|64386|matrix metallopeptidase 25##AF145442|MMP25|64386|matrix metallopeptidase 25##AF185270|MMP25|64386|matrix metallopeptidase 25##BC128602|CCDC64B|146439|coiled-coil domain containing 64B##NM_001103175|CCDC64B|146439|coiled-coil domain containing 64B##BC064026|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##BC065514|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##NM_001002017|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##NM_001002018|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##NM_017885|HCFC1R1|54985|host cell factor C1 regulator 1 (XPO1 dependent)##BC026114|LOC100507419|100507419|uncharacterized LOC100507419##BC045731|LOC100507419|100507419|uncharacterized LOC100507419##BC009401|IL32|9235|interleukin 32##NM_001012631|IL32|9235|interleukin 32##NM_001012633|IL32|9235|interleukin 32##NM_001012718|IL32|9235|interleukin 32##NM_004221|IL32|9235|interleukin 32##AY495331|IL32|9235|interleukin 32##AY495332|IL32|9235|interleukin 32##AY495333|IL32|9235|interleukin 32##AK307158|IL32|9235|interleukin 32##FJ985780|IL32|9235|interleukin 32##NM_001012635|IL32|9235|interleukin 32	0.381406	CTCF.p2:21:0.381
chr20	47405286	47405388	reg1036975.p1	3.698	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-990019	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-990585	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1274653	+	AB037836 TSC_hg19_v1_chr20_-_47444291	38949	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	39102	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	132981	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr21	45284445	45284540	reg1025619.p3	3.698	+	TSC_hg19_v1_chr21_+_45209457 AK223185 AK303000 AK223215 AK313116 BC000380 U79775 CU674182 DQ891391 DQ894567 BC014787	-75007	+	TSC_hg19_v1_chr21_+_45209429 NM_003683	-75077	+	TSC_hg19_v1_chr21_-_45196227 BC010532 L03558 NM_000100	-88263	-	TSC_hg19_v1_chr21_+_45285029 AY358704	568	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	631	+	AK300562 NM_001037553	60786	+	AK223185|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK303000|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK223215|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK313116|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC000380|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##U79775|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ891391|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ894567|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC014787|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##NM_003683|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC010532|CSTB|1476|cystatin B (stefin B)##L03558|CSTB|1476|cystatin B (stefin B)##NM_000100|CSTB|1476|cystatin B (stefin B)##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3	0.039137	
chr2	207019071	207019173	reg1040177.p2	3.698	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	-68211	-	TSC_hg19_v1_chr2_+_206547371 AK290934	-471761	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	-471944	+	AK295987 NM_001199984	4795	-	X61100 AK098395 BC018900 BC022368 TSC_hg19_v1_chr2_-_207024145 AK300585 BC030833 AK295705 AK295966 AK298320 BC004133 NM_001199981 NM_001199982 NM_001199983 NM_005006	5050	-	NM_001037663 NM_001959 NM_021121 TSC_hg19_v1_chr2_+_207024320	5196	+	AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D##AK290934|NRP2|8828|neuropilin 2##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AK295987|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199984|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##X61100|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK098395|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC018900|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC022368|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK300585|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC030833|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295705|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK295966|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##AK298320|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##BC004133|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199981|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199982|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001199983|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_005006|NDUFS1|4719|NADH dehydrogenase (ubiquinone) Fe-S protein 1, 75kDa (NADH-coenzyme Q reductase)##NM_001037663|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##NM_001959|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##NM_021121|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2	0.908229	CTCF.p2:12:0.908
chr3	182510631	182510705	reg1034159.p1	3.698	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-1080530	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-1080955	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-1093276	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	619	+	AK296750 TSC_hg19_v1_chr3_+_182511291	627	+	TSC_hg19_v1_chr3_+_182511375 AF156548	721	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.0	
chr4	185202742	185202922	reg1036489.p1	3.698	+	BC035035 AY358676 AK057370 NM_153343	-63767	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-374921	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-375012	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	192849	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	367769	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	368001	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr6	137956583	137956763	reg1041054.p2	3.698	+	BC051352 AK096362 NM_175747	-141148	-	TSC_hg19_v1_chr6_-_137540556 NM_000416	-416115	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-416128	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	231864	+	TSC_hg19_v1_chr6_-_138189314 AK124173	232677	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	471895	-	BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector	0.0	
chr8	22552653	22552781	reg1023408.p5	3.698	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-1933	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-2212	-	AK294968 AK295834 NM_001199881	-2643	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	232607	-	AK092617 BC034917 NM_001160036	292206	+	NM_001160037	300643	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.0	
chrX	73999096	73999232	reg1031079.p2	3.698	+	NM_016120 NM_183353 TSC_hg19_v1_chrX_-_73834460	-164700	-	TSC_hg19_v1_chrX_-_73834444 AK001334	-164725	-	BC002451 TSC_hg19_v1_chrX_-_73834428	-164736	-	AK307471 NM_001008537 AB095942 BC152557	146135	-	TSC_hg19_v1_chrX_-_74376076 AF078777 AK307414 AF133659 BT009918 CU675349 DQ890692 EU176476 BC006323 AF038950 BX537833 AK294657 AK001418 NM_004299	376939	-	NM_145052 TSC_hg19_v1_chrX_+_74493908 AY643714 AK309951 AK056354 BC015116 CR749336 AK293024	494794	+	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting##NM_183353|RLIM|51132|ring finger protein, LIM domain interacting##AK001334|RLIM|51132|ring finger protein, LIM domain interacting##AK307471|KIAA2022|340533|KIAA2022##NM_001008537|KIAA2022|340533|KIAA2022##AB095942|KIAA2022|340533|KIAA2022##BC152557|KIAA2022|340533|KIAA2022##AF078777|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK307414|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AF133659|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BT009918|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##DQ890692|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##EU176476|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BC006323|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AF038950|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BX537833|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK294657|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK001418|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##NM_004299|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##NM_145052|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AY643714|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK309951|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK056354|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##BC015116|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##CR749336|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK293024|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)	0.0	
chr11	134944472	134944556	reg1036937.p2	3.697	+	AB029396 BC010466 NM_018644 NM_054025 TSC_hg19_v1_chr11_-_134281917	-662693	-	AK074855 AK074855 TSC_hg19_v1_chr11_+_134201905 AK074947 AK074947	-742594	+	NM_138342 BC040641 BC040641 AK074703 AK074703 TSC_hg19_v1_chr11_+_134201886 AY358497 AY358497	-742686	+	None	None	None	None	None	None	None	None	None	AB029396|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##BC010466|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##NM_018644|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##NM_054025|B3GAT1|27087|beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P)##AK074855|GLB1L2|89944|galactosidase, beta 1-like 2##AK074855|GLB1L2|89944|galactosidase, beta 1-like 2##AK074947|GLB1L2|89944|galactosidase, beta 1-like 2##AK074947|GLB1L2|89944|galactosidase, beta 1-like 2##NM_138342|GLB1L2|89944|galactosidase, beta 1-like 2##BC040641|GLB1L2|89944|galactosidase, beta 1-like 2##BC040641|GLB1L2|89944|galactosidase, beta 1-like 2##AK074703|GLB1L2|89944|galactosidase, beta 1-like 2##AK074703|GLB1L2|89944|galactosidase, beta 1-like 2##AY358497|GLB1L2|89944|galactosidase, beta 1-like 2##AY358497|GLB1L2|89944|galactosidase, beta 1-like 2	0.01064	
chr11	60110886	60110968	reg1012383.p2	3.697	+	BC101783 AF333758 AF354931 BC069322 NM_139249 GQ129453 GQ129454 AF354933 BC034588 AF354932	-8545	+	NM_001243266 NM_024021 NM_148975 AK292089 AK075081 TSC_hg19_v1_chr11_+_60048138 BC020648 CU676600 DQ891395 DQ894573 AB022821 AK314033 AB013102	-62834	+	AK291870 NM_001247999 NM_152852	-158789	-	AK075106 NM_021201 NM_206938 NM_206939 NM_206940 AK297027 TSC_hg19_v1_chr11_+_60146004 BC043485 AF309653 AK309884	35060	+	TSC_hg19_v1_chr11_+_60146063 BC020673 AF237916 AF201951 AF350501	35132	+	NM_001079692 NM_032597	52559	+	BC101783|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF333758|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354931|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC069322|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_139249|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129453|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##GQ129454|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354933|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##BC034588|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##AF354932|MS4A6E|245802|membrane-spanning 4-domains, subfamily A, member 6E##NM_001243266|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_024021|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##NM_148975|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK292089|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK075081|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##BC020648|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ891395|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##DQ894573|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB022821|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK314033|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AB013102|MS4A4A|51338|membrane-spanning 4-domains, subfamily A, member 4##AK291870|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_001247999|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##NM_152852|MS4A6A|64231|membrane-spanning 4-domains, subfamily A, member 6A##AK075106|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_021201|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206938|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206939|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_206940|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK297027|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF309653|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AK309884|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##BC020673|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF237916|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF201951|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##AF350501|MS4A7|58475|membrane-spanning 4-domains, subfamily A, member 7##NM_001079692|MS4A14|84689|membrane-spanning 4-domains, subfamily A, member 14##NM_032597|MS4A14|84689|membrane-spanning 4-domains, subfamily A, member 14	0.0	
chr1	206939948	206940087	reg1034137.p1	3.697	+	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-81546	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-130907	+	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	-131173	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	5862	-	AY040367 NM_153758 AB463800	32209	+	AF453946 NM_013371	62204	+	BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19	0.0	
chr13	44622546	44622670	reg1028054.p1	3.697	+	AK096044 NM_153218 TSC_hg19_v1_chr13_+_44453986 BC035749	-168602	+	NM_144974 AK056408	-168783	-	NM_001128303	-169189	+	BC029067 NM_001010897 TSC_hg19_v1_chr13_+_44947983	325374	+	U35048 TSC_hg19_v1_chr13_-_45010962 AJ222700 BC105277 BC069207	388344	-	BC146664 BC146679 TSC_hg19_v1_chr13_-_45010983 BC000456 BC016867	388371	-	AK096044|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_153218|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC035749|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC029067|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##NM_001010897|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##U35048|TSC22D1|8848|TSC22 domain family, member 1##AJ222700|TSC22D1|8848|TSC22 domain family, member 1##BC105277|TSC22D1|8848|TSC22 domain family, member 1##BC069207|TSC22D1|8848|TSC22 domain family, member 1##BC146664|TSC22D1|8848|TSC22 domain family, member 1##BC146679|TSC22D1|8848|TSC22 domain family, member 1##BC000456|TSC22D1|8848|TSC22 domain family, member 1##BC016867|TSC22D1|8848|TSC22 domain family, member 1	0.063459	
chr14	106964274	106964402	reg1040072.p1	3.697	+	AK058096 TSC_hg19_v1_chr14_+_106938444 BX248748	-25880	+	GQ232933 AY003798 FJ840151 FJ873995 EF407840 AM279492 AM279629 HM774186 AY957513 EF633772 AY062305 DQ524058 AF174122 AY944701 DQ065664 DQ065670 DQ065719 DQ065726 DQ926522 EF178118 EF633803 FJ385316 GU570332 HM995173 HM995251 HM995315 HM995321 HM995523 AB021518 AB021527 AF035043 AF471473 AJ579183 DQ535349 DQ535444 GU570331 GU570333 X95661 Z47231 BC092518 TSC_hg19_v1_chr14_-_106926725 BX647160 AK123783 AK097306 AK097329	-37779	-	M26436 AF460777 AF460681 AF460752 AF460755 AF460757 AF460765 AF460810 AF460812 AF460831 DQ523929 DQ454948 AY671729 DQ454947 DQ454726 DQ523868 GU552769 DQ454532 DQ454722 DQ455007 AY003768 DQ454459 DQ454476 DQ454521 DQ454576 DQ454700 DQ454857 DQ454950 DQ454951 DQ454992 AY003754 AY003755 DQ454385 DQ454512 DQ454519 DQ454523 DQ454525 DQ454871 DQ454911 DQ454957 DQ454995 DQ523886 DQ523909 DQ454708 DQ454834 DQ454952 Z30547 AY003759 AY003846 DQ454513 DQ454543 DQ454553 DQ454573 DQ454584 DQ454861 DQ454999 DQ523882 DQ523894 Z30596 Z30671 Z30678 DQ454574 DQ454641 DQ523872 DQ523875 DQ523877 DQ523881 DQ523885 DQ523893 DQ523931 GQ232855 DQ454511 DQ454569 DQ454914 AY671731 DQ454648 DQ454670 DQ454712 DQ454826 DQ454910 DQ523930 DQ454724 DQ523928 EF583668 FJ873953 FJ874088 FJ874094 HM116105 HM116162 HM116163 HM116170 HM116175 HM116205 HM116208 HM116216 HM116219 HM116221 HM116222 AF017461 AY003739 EF566908 EU433882 EF566910 EF175421 EF091928 EF175407 EF175434 JF810279 DQ454890 EU099169 GQ232853 GQ232860 EU099112 AY577306 AY671269 EU099238 EU099255 EU099278 EU099267 AY393182 DQ454516 DQ523927 EU099061 EU099227 EU099280 AY393164 AY393167 AY393170 AY393173 AY393175 AY393184 DQ454761 DQ454509 U86799 U86800 AM279538 AM279578 AF103061 AF103313 AF103094 AF103102 AF103108 AF103178 AF103316 AF103344 AF103175 FJ385434 Z46857 AF103048 AY671390 AF103191 AF103306 DQ454773 FJ385373 FJ385423 JN110934 FJ385353 FJ385377 FJ385435 DQ100712 S56197 Y14936 AF103053 AF103287 AF103337 AF103362 EF624226 EU146343 AB266512 AJ233696 AJ233713 AJ241346 AJ241354 AJ241355 AY671271 DQ926071 L06023 Y08143 AY062315 AY671071 AY671083 AY671086 AY671327 AY671329 AY671334 AY671338 AY671339 AY671340 AY671350 AY671352 AY671355 AY671358 AY671360 AY671361 AY671363 AY671466 AY671475 AY671490 AY671495 AY671496 AY671497 AY671504 HM995782 HM995595 HM996519 Z75393 HM996222 HM996265 HM996480 AB067362 AF408717 AJ579116 DQ454486 DQ454510 DQ524001 DQ524017 DQ524030 DQ524032 DQ524038 DQ524060 DQ524061 DQ524131 HQ378355 DQ100921 AB363103 AF062292 AF103242 AJ271556 AJ300809 AM233765 AM233768 AY640481 AY670800 AY670844 AY686871 AY686878 AY686881 AY686888 AY998731 DQ065717 DQ100791 DQ100892 DQ100903 DQ100904 DQ100916 DQ454483 DQ454484 DQ523946 DQ523952 DQ523955 DQ523965 DQ523972 DQ523999 DQ524000 DQ524037 DQ524114 DQ926103 DQ926425 EF178068 EF178083 FJ385292 HM995356 HM995357 HM995358 HM995359 HM995360 HM995369 HM995387 HM995526 HM995565 HM995594 HM995596 HM995842 HM995844 HM996018 HM996190 HM996196 HM996243 HM996279 HM996460 HM996487 HM996520 AY866815 Z70624 DQ100809 AY671701 AB063791 AB063873 AB066905 AB066909 AB067120 AB067278 AB067279 AB067284 AB067289 AB067299 AB363098 AB363104 AB363113 AB374205 AF021958 AF021975 AF021980 AF022006 AF062128 AF062176 AF107238 AF174053 AF174078 AF174082 AF174087 AF174124 AF396470 AF396472 AF396478 AF398963 AF455548 AJ244932 AJ244933 AJ244945 AJ244947 AJ244948 AJ244957 AJ244974 AJ244980 AJ244981 AJ244986 AJ244993 AJ244995 AJ245001 AJ245006 AJ245014 AJ245018 AJ245021 AJ245023 AJ245024 AJ245030 AJ245033 AJ245034 AJ245038 AJ245056 AJ245060 AJ245061 AJ245071 AJ249629 AJ279514 AJ279515 AJ279525 AJ279530 AJ308449 AJ389175 AJ389176 AJ414019 AJ416561 AJ555264 AJ556674 AJ556675 AJ556676 AJ556691 AJ556693 AJ574781 AJ579117 AJ579126 AJ579130 AJ579131 AJ579134 AJ579138 AJ579166 AJ579168 AJ579169 AJ579170 AJ579179 AJ579200 AJ579202 AJ579205 AJ579209 AJ579210 AJ579214 AJ579244 AJ579245 AJ579292 AJ579293 AJ579297 AJ617569 AY165854 AY268372 AY268373 AY300037 AY577300 AY640552 AY670713 AY670734 AY670740 AY670742 AY670747 AY670751 AY670754 AY670758 AY670762 AY670771 AY670774 AY670799 AY670802 AY670805 AY670817 AY670822 AY670823 AY670825 AY670849 AY670850 AY670858 AY670859 AY670865 AY670874 AY670881 AY670894 AY670896 AY670897 AY670902 AY670914 AY670920 AY670922 AY670947 AY670950 AY670955 AY670960 AY670961 AY670970 AY670972 AY670978 AY670980 AY670986 AY670991 AY671017 AY671060 AY671089 AY671090 AY671101 AY671109 AY671112 AY671114 AY671119 AY671124 AY671126 AY671136 AY671137 AY671140 AY671146 AY671264 AY671318 AY671368 AY671369 AY671384 AY671392 AY671418 AY671433 AY671439 AY671482 AY671489 AY671517 AY671524 AY671534 AY671536 AY671545 AY671552 AY671560 AY671562 AY671563 AY671567 AY671572 AY671576 AY671578 AY671582 AY671583 AY671588 AY671598 AY671599 AY671600 AY671602 AY671616 AY671624 AY671626 AY671635 AY671638 AY671661 AY671672 AY671677 AY671681 AY671730 AY671736 AY671744 AY671752 AY671773 AY671774 AY671778 AY671780 AY671786 AY781849 AY885184 AY941931 AY941962 AY941975 AY960198 AY960201 AY971014 AY971044 AY971045 AY971080 AY971086 AY998723 DQ005257 DQ065676 DQ100673 DQ100687 DQ100701 DQ100784 DQ100821 DQ100822 DQ100824 DQ100825 DQ100897 DQ100953 DQ205162 DQ205173 DQ212518 DQ212520 DQ328872 DQ431572 DQ431610 DQ926162 DQ926290 DQ926291 DQ926302 DQ926317 DQ926323 DQ926515 DQ926519 DQ926521 DQ926608 FJ039783 FJ039790 FJ039791 FJ385371 FJ385402 FR820867 FR820868 FR820869 FR820870 FR820871 FR820872 FR820873 FR820875 GU570374 HM152512 HM152521 HQ689769 JN201901 L12190 L43117 U00494 U00566 U00571 U00578 U00581 U64496 U96278 U96280 U96285 U96287 U97243 X84336 X84339 Y08428 Y09249 Y09390 Z18316 Z46285 Z70608 Z70621 Z70622 Z70623 Z70631 Z70632 Z70654 Z70655 Z70656 Z70657 DQ926182 DQ926347 DQ926348 AY944695 DQ535289 DQ535393 DQ535427 DQ535433 DQ535456 EF177973 EF178111 EF178132 FJ385279 AJ579303 X54447 AY392937 X17678 S63731 X54437 Z14197 AY671021 AY670994 AY671000 AY671001 AY671009 AY671012 AY671016 AY671023 AY671031 AY671036 AY671054 AY671142 AY671197 AY671335 AY671182 AF013622 AY671048 AY671052 AY671159 AY671179 AY671239 AY671263 AY671276 AY671279 AY671282 AF013619 AF062204 AF062240 AF247737 AY671165 AY671185 AY671217 AY671297 AY671693 AY671723 AY671725 CU677619 EU937522 L23556 L38425 M99607 U86523 U86524 X65903 X65911 Z14198 Z75364 Z75388 AY671162 X52895 TSC_hg19_v1_chr14_-_106878091 X56158 M97921 AF417843 AK057754 AK057775 AK130529 BC025985 BX640824 AK130609 Z14206 AK126352 AK129514 AK129592 AK129637 AK130589 AK130611 BC016369 BX538077 BX648082 BX648874 Z14195 AK095222 AK303185	-86431	-	AF267810 AJ437675 AF460791 DQ454635 DQ454884 DQ454865 AY003769 DQ454594 GQ232992 AY003745 DQ454832 GQ232765 AJ487487 EF175435 EF407821 GQ232961 EF441745 HM995164 AF211927 AJ007324 Y11325 EU620026 HM775060 AF103302 GQ232964 L33027 AF103133 AY393603 AF103050 FJ385397 HM774702 HM774015 HM774234 JN110957 EU099230 Z46851 FJ385343 FJ385415 HM773990 HM774046 HM774271 HM774309 HM774755 HM774756 HM774760 HM774764 HM774779 HM774783 HM774818 HM774827 HM774854 HM774920 HM774972 HM775016 HQ704041 AF103336 AF008566 EU099186 AY062327 EF624219 EU099222 EU146311 AY392845 AY392853 AY392861 AY393021 AY393022 AY393105 AY393109 AY393112 AY393117 AY393118 AY393119 AY393120 AY393126 AY393129 AY393132 AY393340 AY393626 AY393630 AY393647 AY393665 AY393668 AY393680 DQ926548 EF178065 AY885180 AJ555255 AF103269 GU570259 DQ524005 DQ524026 DQ524034 DQ524051 DQ524111 DQ524118 DQ524130 DQ524137 HM994931 HM994936 HM994937 HM995039 HM995040 HM995041 HM995076 HM995081 HM995161 HM995163 HM995167 HM995169 HM995170 HM995171 HM995199 HM995200 HM995268 HM995269 HM995271 HM995273 HM995275 HM995276 HM995328 HM995329 HM995338 HM995339 HM995340 HM995341 HM995489 HM995555 HM995581 HM995584 HM995825 HQ378379 FJ195581 AB063827 AB066880 AB066986 AB067101 AF035022 AF174075 AF455923 AY033271 AY033272 AY686900 AY686901 AY686904 AY686905 AY686914 AY686934 AY686936 AY882008 AY944697 AY944705 AY944706 AY944712 AY955068 DQ065671 DQ100732 DQ926199 DQ926325 DQ926442 DQ926564 DQ926601 DQ926652 EF177961 EF177968 EF177981 EF177982 EF177999 EF178001 EF178007 EF178027 EF178055 EF178063 EF178077 FJ195457 FJ195459 FJ195473 FJ195584 FJ195585 FJ195588 FJ195589 FJ195591 FJ773243 GU570252 AB063685 AB063709 AB066828 AB066927 AB066941 AB066965 AB067153 AB067164 AB067173 AB067312 AB067313 AB067321 AB067323 AB067325 AB067379 AB114449 AB114451 AB114458 AB289326 AF006519 AF021940 AF021974 AF062160 AF115128 AF174039 AF359365 AJ272399 AJ413988 AY165858 AY781814 AY781869 AY885174 AY971019 AY971047 AY971049 AY971069 DQ100812 DQ205160 DQ926068 DQ926243 DQ926567 GU570249 GU570251 GU570255 GU570258 HM152508 HQ378325 HQ378393 JN158507 JN158798 JN159083 JN159296 JN159297 L43089 U00492 U00559 X79159 X99367 Z92890 Z95481 Z97033 AY686893 AY686903 AY686911 AY686917 AY686920 AY686923 AY944689 AY944691 AY944699 AY944700 DQ535291 DQ535411 DQ535431 EF177955 EF177972 EF177994 EF177995 EF178000 EF178008 EF178012 EF178057 EF178058 EF178070 FJ195460 FJ195461 FJ195465 FJ195476 FJ195570 FJ195573 FJ195574 FJ195576 FJ195577 FJ195578 FJ195579 FJ195582 FJ195583 FJ195590 AF062145 AY392862 AY392875 L02325 S77600 U43756 X65884 X65886 Z11957 Z47230 CU676428 L23560 M26463 BX640621 TSC_hg19_v1_chr14_-_106967517 AY039026 BC019337	2962	-	BX640710 TSC_hg19_v1_chr14_-_106967543 AK097354 AK097357 L22586 AK092384 AK125238 AX747511 AK125703 AK092976 AX747834 AK097028 L06610	3229	-	GQ232968 DQ454715 DQ454740 DQ454804 FJ840179 GU552701 FJ840340 GQ232950 GQ232981 GU552754 DQ454538 DQ454540 DQ454585 DQ523858 GU552713 AY003858 DQ454386 DQ454541 DQ454621 DQ454676 GU552719 GU552720 GU552767 AY003800 EF566901 DQ454598 DQ454606 DQ454788 DQ455001 DQ454592 Z11947 FJ873823 FJ873826 FJ873839 FJ873846 FJ873864 FJ873876 FJ873933 FJ873992 HM116214 EF175393 AY003851 EF175424 EU350424 GU358679 JF810268 EU099085 EU099261 AY206990 AF103064 AM279530 HM996031 GQ903512 AF103334 AF062095 AF103183 AF103113 L07311 AF165109 AY062321 HM774774 JN110645 JN110658 JN110671 JN110688 JN110706 JN110718 FJ385349 HM774039 HM774378 HM774566 HM774910 HQ704000 HQ704008 HQ704009 AY062300 HM774238 HM775050 AF103319 AF194121 HM775049 DQ100804 EU146317 EU146347 EU146389 DQ100818 DQ100905 AJ006652 AF485463 AF485473 AY423189 AY423190 AY423196 AY423198 AY423199 AY423207 HM996483 AF103257 AY941883 DQ100909 AF006520 AJ249628 AY866746 DQ187712 DQ524024 GU570284 HM995016 HM995139 HM995190 HM995191 HM995236 HM995887 HM995889 HM995890 HM995891 HM995919 HM996054 HM996304 HM996511 AJ245323 AJ245324 DQ322799 DQ840839 DQ840841 DQ926120 DQ926247 DQ926326 AB374202 AF115123 AF174048 AJ245353 AJ245354 AJ245355 AJ278773 AY640567 AY866807 AY941926 AY944711 DQ100900 DQ100918 DQ926040 DQ926081 DQ926084 DQ926450 DQ926565 DQ926602 DQ926604 EU794403 Z18824 AB021525 AB063673 AB363090 AB363101 AB363126 AB363166 AF021949 AF021979 AF035023 AF052525 AF062215 AF062235 AF129457 AF174081 AF398962 AF408730 AF455546 AF455553 AF471175 AF471178 AF471201 AF471216 AF471265 AF471373 AF471475 AF471476 AF471477 AF471486 AF471490 AF471494 AF471528 AJ239363 AJ239370 AJ389190 AJ413993 AJ627249 AM040520 AM040566 AM259133 AM259134 AY466507 AY866733 AY866738 AY866759 AY866795 AY941854 AY941870 AY941906 AY941952 AY941974 AY941976 AY941980 AY962566 D83682 DQ065617 DQ205182 DQ212502 DQ212503 DQ535300 DQ535366 DQ535419 DQ535472 DQ926167 DQ926385 DQ926389 DQ926413 DQ926426 DQ926459 DQ926557 DQ926616 EF177950 EU549721 FJ492926 GQ903506 GU570336 GU570338 GU570341 HM152510 U00501 U77374 X59703 X87449 Z33898 Z96965 Z98722 AF283800 AJ519241 HM995874 AJ519332 L28051 AJ519250 AJ519294 AY392920 AY393056 L08082 AF062182 AF062206 AF062253 AF062285 AY190818 X81729 Z47218 TSC_hg19_v1_chr14_-_106994347 AK097076 AK097206 AK097859 AK126358 AK128664 AK130501 AK301358 BX640853 BX640854	29836	-	AK058096|LINC00221|338005|long intergenic non-protein coding RNA 221##BX248748|LINC00221|338005|long intergenic non-protein coding RNA 221##BC092518|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK123783|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097329|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK057754|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK057775|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130529|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC025985|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BX640824|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AK126352|IGH@|3492|immunoglobulin heavy locus##AK129514|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK129592|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK129637|IGHM|3507|immunoglobulin heavy constant mu##AK130589|IGHV4-31|28396|immunoglobulin heavy variable 4-31##AK130611|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC016369|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX538077|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK095222|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640621|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC019337|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BX640710|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK097354|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK097357|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK092384|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125238|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK092976|IGHM|3507|immunoglobulin heavy constant mu##AK097028|IGHA1|3493|immunoglobulin heavy constant alpha 1##AF035023|IGHV3-48|28424|immunoglobulin heavy variable 3-48##AK097076|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK097859|IGHM|3507|immunoglobulin heavy constant mu##AK128664|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK130501|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640854|IGH@|3492|immunoglobulin heavy locus	0.94724	CTCF.p2:50:0.947
chr15	101728324	101728456	reg1038357.p1	3.697	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-268878	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-268916	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-308319	+	AB071402 TSC_hg19_v1_chr15_-_101791795	63346	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	63745	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	89273	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.0	
chr16	30470089	30470195	reg1026978.p1	3.697	+	TSC_hg19_v1_chr16_-_30457197 AK093889 AX748354 NM_012248	-12913	-	BC016643 BC002381 U43286 TSC_hg19_v1_chr16_-_30457196 AK092003 AK303275 AX747304	-12960	-	CR457335 TSC_hg19_v1_chr16_-_30441339 AK024843 AF212242 AF210430 AY453409 BC001344 NM_024096	-28803	-	TSC_hg19_v1_chr16_+_30484003 NM_001114380 NM_002209 AX794822 AX794826 AK314246	13858	+	BC008777 AX794824 TSC_hg19_v1_chr16_+_30484062 AK298674 AX794810 Y00796 AK303190	13930	+	TSC_hg19_v1_chr16_+_30484116 AX794821 CU679099	13991	+	AK093889|SEPHS2|22928|selenophosphate synthetase 2##NM_012248|SEPHS2|22928|selenophosphate synthetase 2##BC016643|SEPHS2|22928|selenophosphate synthetase 2##BC002381|SEPHS2|22928|selenophosphate synthetase 2##U43286|SEPHS2|22928|selenophosphate synthetase 2##AK092003|SEPHS2|22928|selenophosphate synthetase 2##AK303275|SEPHS2|22928|selenophosphate synthetase 2##CR457335|DCTPP1|79077|dCTP pyrophosphatase 1##AK024843|DCTPP1|79077|dCTP pyrophosphatase 1##AF212242|DCTPP1|79077|dCTP pyrophosphatase 1##AF210430|DCTPP1|79077|dCTP pyrophosphatase 1##AY453409|DCTPP1|79077|dCTP pyrophosphatase 1##BC001344|DCTPP1|79077|dCTP pyrophosphatase 1##NM_024096|DCTPP1|79077|dCTP pyrophosphatase 1##NM_001114380|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##NM_002209|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK314246|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##BC008777|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK298674|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##Y00796|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK303190|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)	0.0	
chr17	46178903	46179084	reg1040174.p2	3.697	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-172	-	NM_006807 TSC_hg19_v1_chr17_-_46178605	-410	-	BX647976 TSC_hg19_v1_chr17_+_46126143	-52852	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	5992	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	6159	+	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	328545	-	U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##NM_006807|CBX1|10951|chromobox homolog 1##BX647976|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1	0.0	
chr20	20388663	20388775	reg1046365.p1	3.697	+	TSC_hg19_v1_chr20_+_20348747 M93119 NM_002196	-39965	+	NM_001167816 AL117439	-351399	+	BC144222 AF255443 AF318303 AF318304 AF318305 NM_016652	-352032	-	DQ310704 BC171842 TSC_hg19_v1_chr20_-_20693287 NM_020343	304509	-	NM_001163022 NM_001163023 NM_018474 TSC_hg19_v1_chr20_+_21106657 AF451990 BC039296 AK293567 AK293166 AK025476	717945	+	TSC_hg19_v1_chr20_+_21106722 BC105093 BC113370 AK295355 BC045826	718008	+	M93119|INSM1|3642|insulinoma-associated 1##NM_002196|INSM1|3642|insulinoma-associated 1##NM_001167816|C20orf26|26074|chromosome 20 open reading frame 26##AL117439|C20orf26|26074|chromosome 20 open reading frame 26##BC144222|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF255443|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318303|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318304|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##AF318305|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##NM_016652|CRNKL1|51340|crooked neck pre-mRNA splicing factor-like 1 (Drosophila)##DQ310704|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##BC171842|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_020343|RALGAPA2|57186|Ral GTPase activating protein, alpha subunit 2 (catalytic)##NM_001163022|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_001163023|PLK1S1|55857|polo-like kinase 1 substrate 1##NM_018474|PLK1S1|55857|polo-like kinase 1 substrate 1##AF451990|PLK1S1|55857|polo-like kinase 1 substrate 1##BC039296|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293567|PLK1S1|55857|polo-like kinase 1 substrate 1##AK293166|PLK1S1|55857|polo-like kinase 1 substrate 1##AK025476|PLK1S1|55857|polo-like kinase 1 substrate 1##BC105093|PLK1S1|55857|polo-like kinase 1 substrate 1##BC113370|PLK1S1|55857|polo-like kinase 1 substrate 1##AK295355|PLK1S1|55857|polo-like kinase 1 substrate 1##BC045826|PLK1S1|55857|polo-like kinase 1 substrate 1	0.897399	CTCF.p2:15:0.897
chr20	46993565	46993631	reg1042608.p1	3.697	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-578280	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-578846	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-862914	+	AB037836 TSC_hg19_v1_chr20_-_47444291	450688	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	450841	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	544720	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr21	41239219	41239306	reg1038389.p1	3.697	+	AK092516 AX747579 NM_001080444 AB528819	-121878	+	AB020337 NM_006057 NM_033170 NM_033171 NM_033172 NM_033173	-210009	+	NM_007341 X93498 BC006371 BT006994 GQ129448 GQ129449	-415456	+	NM_006198 U52969 AK289964 BC013791 X93349 AF416716 AM183336	115	+	AB384859 AB209136 TSC_hg19_v1_chr21_-_42218650	979356	-	AF023450 NM_001389 AF217525	979789	-	AK092516|IGSF5|150084|immunoglobulin superfamily, member 5##NM_001080444|IGSF5|150084|immunoglobulin superfamily, member 5##AB020337|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_006057|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033170|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033171|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033172|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033173|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_007341|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##X93498|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##BC006371|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##BT006994|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##GQ129448|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##GQ129449|SH3BGR|6450|SH3 domain binding glutamic acid-rich protein##NM_006198|PCP4|5121|Purkinje cell protein 4##U52969|PCP4|5121|Purkinje cell protein 4##AK289964|PCP4|5121|Purkinje cell protein 4##BC013791|PCP4|5121|Purkinje cell protein 4##X93349|PCP4|5121|Purkinje cell protein 4##AF416716|PCP4|5121|Purkinje cell protein 4##AM183336|PCP4|5121|Purkinje cell protein 4##AB209136|DSCAM|1826|Down syndrome cell adhesion molecule##AF023450|DSCAM|1826|Down syndrome cell adhesion molecule##NM_001389|DSCAM|1826|Down syndrome cell adhesion molecule##AF217525|DSCAM|1826|Down syndrome cell adhesion molecule	0.128461	
chr21	43875432	43875525	reg1030338.p1	3.697	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-51466	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-59317	-	M12075 BC032811 NM_003225 X00474 X52003	-88856	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	40902	-	AJ269529 NM_018964	44263	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	58525	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.44393	CTCF.p2:5:0.444
chr21	46961716	46961896	reg1038272.p1	3.697	+	AK303168 NM_001205207	-7272	-	AF018081 NM_030582 AK311062 TSC_hg19_v1_chr21_+_46875435	-86388	+	AB590554 TSC_hg19_v1_chr21_+_46825311	-136505	+	TSC_hg19_v1_chr21_-_46962344 U17566 U15939 U19720 BC003068 AK313125 AK307623 NM_001205206 NM_194255	526	-	TSC_hg19_v1_chr21_+_47063638 AK310131	101823	+	AF176329 NM_001130141 NM_020528 BC012061 AK310672	308082	+	AK303168|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205207|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AF018081|COL18A1|80781|collagen, type XVIII, alpha 1##NM_030582|COL18A1|80781|collagen, type XVIII, alpha 1##U17566|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U15939|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##U19720|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##BC003068|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK313125|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK307623|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_001205206|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##NM_194255|SLC19A1|6573|solute carrier family 19 (folate transporter), member 1##AK310131|PCBP3|54039|poly(rC) binding protein 3##AF176329|PCBP3|54039|poly(rC) binding protein 3##NM_001130141|PCBP3|54039|poly(rC) binding protein 3##NM_020528|PCBP3|54039|poly(rC) binding protein 3##BC012061|PCBP3|54039|poly(rC) binding protein 3##AK310672|PCBP3|54039|poly(rC) binding protein 3	0.0	
chr2	242089608	242089769	reg1019844.p1	3.697	+	CR749231 NM_001252120	-295	-	AK308015 BC051689 TSC_hg19_v1_chr2_+_242089094	-630	+	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	-817	-	AK294043 TSC_hg19_v1_chr2_+_242089896 BC013001 BC000910 NM_002712 Z50749 BC012397 AB385583 BT007296 BT020134	203	+	AY617079 AY617080 NM_001001666 NM_001001891	38235	+	TSC_hg19_v1_chr2_-_242212216 M64098	122532	-	CR749231|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252120|PASK|23178|PAS domain containing serine/threonine kinase##AK308015|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC051689|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase##AK294043|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC013001|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC000910|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##NM_002712|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##Z50749|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC012397|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT007296|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BT020134|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##AY617079|ANO7|50636|anoctamin 7##AY617080|ANO7|50636|anoctamin 7##NM_001001666|ANO7|50636|anoctamin 7##NM_001001891|ANO7|50636|anoctamin 7##M64098|HDLBP|3069|high density lipoprotein binding protein	0.0	
chr5	179285933	179286062	reg1033423.p2	3.697	+	TSC_hg19_v1_chr5_+_179286046 BC040901	-2	+	BC050714 BC056889 CU686703 AK298954 TSC_hg19_v1_chr5_-_179285809 AK293901 BC069051 BX647375 AK295104 NM_001017987 NM_016175 AB528169 AM392546 AM393590 BX537968 CR936785	-156	-	TSC_hg19_v1_chr5_+_179248089 AK025146	-37892	+	AB449893 TSC_hg19_v1_chr5_-_179334837 AB463306	48833	-	TSC_hg19_v1_chr5_-_179334854 AB014576 BC129994 NM_015043 NM_198868	48855	-	AK313089 BC017100 TSC_hg19_v1_chr5_-_179498743 BC082267	212694	-	BC050714|C5orf45|51149|chromosome 5 open reading frame 45##BC056889|C5orf45|51149|chromosome 5 open reading frame 45##AK298954|C5orf45|51149|chromosome 5 open reading frame 45##AK293901|C5orf45|51149|chromosome 5 open reading frame 45##BC069051|C5orf45|51149|chromosome 5 open reading frame 45##BX647375|C5orf45|51149|chromosome 5 open reading frame 45##NM_001017987|C5orf45|51149|chromosome 5 open reading frame 45##NM_016175|C5orf45|51149|chromosome 5 open reading frame 45##AM392546|C5orf45|51149|chromosome 5 open reading frame 45##AM393590|C5orf45|51149|chromosome 5 open reading frame 45##BX537968|C5orf45|51149|chromosome 5 open reading frame 45##CR936785|C5orf45|51149|chromosome 5 open reading frame 45##AK025146|SQSTM1|8878|sequestosome 1##AB449893|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##AB014576|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##BC129994|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_015043|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##NM_198868|TBC1D9B|23061|TBC1 domain family, member 9B (with GRAM domain)##AK313089|RNF130|55819|ring finger protein 130##BC017100|RNF130|55819|ring finger protein 130##BC082267|RNF130|55819|ring finger protein 130	0.0	
chr8	141468221	141468402	reg1025764.p2	3.697	+	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	-453	-	AB067469 TSC_hg19_v1_chr8_-_141467841	-486	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	-753029	-	AK128755 NM_031466	366	-	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	53081	+	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	53252	+	AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9##AK128755|TRAPPC9|83696|trafficking protein particle complex 9##NM_031466|TRAPPC9|83696|trafficking protein particle complex 9##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1	0.0	
chr10	130830072	130830171	reg1007494.p2	3.696	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-905593	-	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	-984267	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-1124666	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	435350	+	TSC_hg19_v1_chr10_+_131265507 BC000824	435393	+	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	931932	-	NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3	0.0	
chr11	74292391	74292489	reg1039044.p1	3.696	+	TSC_hg19_v1_chr11_-_74204756 NM_001144869	-87690	-	CR936625 DQ192291 NM_005472	-113844	-	TSC_hg19_v1_chr11_-_74109469 BC027950 AB019210 AK056591 BC059360 NM_173582	-182950	-	AK302677 AK316370 D26018 NM_006591 TSC_hg19_v1_chr11_+_74303654 BC092454 AK316301 BC108908 BC108909 BC032636 BC058840 BC041703 AB383722	11223	+	NM_015424 AK304519 AY358522 AY279090 AY279091	149765	-	BC142623 TSC_hg19_v1_chr11_-_74442472	150013	-	NM_001144869|LIPT2|387787|lipoyl(octanoyl) transferase 2 (putative)##CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##AB019210|PGM2L1|283209|phosphoglucomutase 2-like 1##AK056591|PGM2L1|283209|phosphoglucomutase 2-like 1##BC059360|PGM2L1|283209|phosphoglucomutase 2-like 1##NM_173582|PGM2L1|283209|phosphoglucomutase 2-like 1##AK302677|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316370|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##D26018|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_006591|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC092454|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316301|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108908|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108909|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC032636|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC058840|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC041703|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_015424|CHRDL2|25884|chordin-like 2##AK304519|CHRDL2|25884|chordin-like 2##AY358522|CHRDL2|25884|chordin-like 2##AY279090|CHRDL2|25884|chordin-like 2##AY279091|CHRDL2|25884|chordin-like 2##BC142623|CHRDL2|25884|chordin-like 2	0.0	
chr1	201764344	201764435	reg1037808.p2	3.696	+	AB033039 TSC_hg19_v1_chr1_+_201751812	-12604	+	TSC_hg19_v1_chr1_+_201709059 BC069250	-55324	+	TSC_hg19_v1_chr1_+_201709027 NM_001167738 BX648460	-55405	+	TSC_hg19_v1_chr1_+_201798284 NM_018085	33901	+	TSC_hg19_v1_chr1_+_201798330 AF410465	33948	+	AK311191 TSC_hg19_v1_chr1_+_201857806 NM_198149 AK316312 BC111855	93413	+	AB033039|NAV1|89796|neuron navigator 1##BC069250|NAV1|89796|neuron navigator 1##NM_001167738|NAV1|89796|neuron navigator 1##BX648460|NAV1|89796|neuron navigator 1##NM_018085|IPO9|55705|importin 9##AF410465|IPO9|55705|importin 9##AK311191|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##NM_198149|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##AK316312|SHISA4|149345|shisa homolog 4 (Xenopus laevis)##BC111855|SHISA4|149345|shisa homolog 4 (Xenopus laevis)	0.0	
chr13	33962354	33962506	reg1036648.p1	3.696	+	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	-37662	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	-102563	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-182266	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	288505	-	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	429797	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	429854	+	AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa	0.0	
chr17	3701876	3701978	reg1032171.p2	3.696	+	TSC_hg19_v1_chr17_+_3627210 AK310546 AK315247 BC036181 NM_031965 AK056691 AB039834 AF289865 BC050662 AK292715 BC016626 BC047457	-74711	+	TSC_hg19_v1_chr17_-_3627077 AF289864	-74825	-	AB209623 BC016917 AK307959 TSC_hg19_v1_chr17_-_3599535 BC008319 AK290889 NM_001204519 NM_001204520 NM_002561 NM_175080	-102335	-	HQ258689 TSC_hg19_v1_chr17_-_3704463	2526	-	TSC_hg19_v1_chr17_-_3704490 BC113436 BC117207 NM_002208	2584	-	TSC_hg19_v1_chr17_-_3749541 NM_001114118 NM_018553	47583	-	BC036181|GSG2|83903|germ cell associated 2 (haspin)##NM_031965|GSG2|83903|germ cell associated 2 (haspin)##AK056691|GSG2|83903|germ cell associated 2 (haspin)##AB039834|GSG2|83903|germ cell associated 2 (haspin)##AF289865|GSG2|83903|germ cell associated 2 (haspin)##BC050662|GSG2|83903|germ cell associated 2 (haspin)##AK292715|GSG2|83903|germ cell associated 2 (haspin)##BC016626|GSG2|83903|germ cell associated 2 (haspin)##BC047457|GSG2|83903|germ cell associated 2 (haspin)##AF289864|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##AB209623|P2RX5-TAX1BP3|100533970|P2RX5-TAX1BP3 readthrough##BC016917|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK307959|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC008319|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK290889|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204519|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204520|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_002561|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_175080|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##HQ258689|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC113436|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC117207|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_002208|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_001114118|C17orf85|55421|chromosome 17 open reading frame 85##NM_018553|C17orf85|55421|chromosome 17 open reading frame 85	0.0	
chr18	2656164	2656319	reg1034897.p1	3.696	+	BC006008 NM_015295 TSC_hg19_v1_chr18_+_2655885	-327	+	TSC_hg19_v1_chr18_+_2571589 AF017790	-84646	+	NM_006101 BC005239 TSC_hg19_v1_chr18_+_2571579 AK289396 AK313184 BC035617 BC010171	-84696	+	TSC_hg19_v1_chr18_+_2847006 AF270513 NM_032048 BC032231 BC136541	190790	+	AB026706 TSC_hg19_v1_chr18_+_2907037	250760	+	BC152448 D87436 NM_014646	355703	-	BC006008|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##NM_015295|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##AF017790|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##NM_006101|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC005239|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK289396|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK313184|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC035617|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC010171|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AF270513|EMILIN2|84034|elastin microfibril interfacer 2##NM_032048|EMILIN2|84034|elastin microfibril interfacer 2##BC032231|EMILIN2|84034|elastin microfibril interfacer 2##BC136541|EMILIN2|84034|elastin microfibril interfacer 2##AB026706|EMILIN2|84034|elastin microfibril interfacer 2##BC152448|LPIN2|9663|lipin 2##D87436|LPIN2|9663|lipin 2##NM_014646|LPIN2|9663|lipin 2	0.471611	CTCF.p2:-33:0.472
chr19	2789626	2789776	reg1034205.p2	3.696	+	TSC_hg19_v1_chr19_+_2785534 BC002391 NM_003249 BC000135 BC013878 Z50115 U29366 EU176234 CU677940 CU680690	-4140	+	TSC_hg19_v1_chr19_-_2783332 NM_003021	-6359	-	AK293535 TSC_hg19_v1_chr19_-_2783326	-6374	-	TSC_hg19_v1_chr19_+_2819873 NM_001102651 AK299752 BC047777 AK092136 AX747373	30172	+	TSC_hg19_v1_chr19_+_2819942 BC000113 CU690506	30304	+	NM_001172775 NM_152791 AK093163 AX747966 AL832140 BX647423 BC022022 AK292954	51757	+	BC002391|THOP1|7064|thimet oligopeptidase 1##NM_003249|THOP1|7064|thimet oligopeptidase 1##BC000135|THOP1|7064|thimet oligopeptidase 1##BC013878|THOP1|7064|thimet oligopeptidase 1##Z50115|THOP1|7064|thimet oligopeptidase 1##U29366|THOP1|7064|thimet oligopeptidase 1##EU176234|THOP1|7064|thimet oligopeptidase 1##NM_003021|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##AK293535|SGTA|6449|small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha##NM_001102651|ZNF554|115196|zinc finger protein 554##AK299752|ZNF554|115196|zinc finger protein 554##BC047777|ZNF554|115196|zinc finger protein 554##AK092136|ZNF554|115196|zinc finger protein 554##BC000113|ZNF554|115196|zinc finger protein 554##NM_001172775|ZNF555|148254|zinc finger protein 555##NM_152791|ZNF555|148254|zinc finger protein 555##AK093163|ZNF555|148254|zinc finger protein 555##AL832140|ZNF555|148254|zinc finger protein 555##BX647423|ZNF555|148254|zinc finger protein 555##BC022022|ZNF555|148254|zinc finger protein 555##AK292954|ZNF555|148254|zinc finger protein 555	0.0	
chr2	157394717	157394795	reg1034477.p2	3.696	+	TSC_hg19_v1_chr2_+_157292921 U12424 BC019874	-101802	+	TSC_hg19_v1_chr2_+_157292894 NM_000408 AK292817	-101890	+	TSC_hg19_v1_chr2_+_157292178 AB209399 U36310 AK299645	-102522	+	BC142676 BC142703 AY277591 NM_014568 AK292154 BC144211	719537	+	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	787528	-	NM_001009959 AK296477	789400	-	U12424|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC019874|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_000408|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK292817|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AB209399|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U36310|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK299645|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##BC142676|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC142703|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AY277591|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##NM_014568|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##AK292154|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##BC144211|GALNT5|11227|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein	0.0	
chr22	26242527	26242603	reg1036249.p1	3.696	+	TSC_hg19_v1_chr22_+_26138168 AY077700	-104381	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	-104445	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-281619	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	322872	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	322932	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	323098	+	AY077700|MYO18B|84700|myosin XVIIIB##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.0	
chr3	23695081	23695147	reg1042545.p1	3.696	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	-450359	+	TSC_hg19_v1_chr3_+_23244600 AK307075	-450531	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-1280980	-	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	152296	+	AK314854 TSC_hg19_v1_chr3_+_23847474	152360	+	AK295354 NM_001202476	156819	+	AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK310298|ZNF385D|79750|zinc finger protein 385D##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##AK314854|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_001202476|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.0	
chr3	42162435	42162582	reg1042744.p1	3.696	+	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	-29675	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	-158949	-	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	-921484	+	TSC_hg19_v1_chr3_+_42190749 AK294221	28240	+	AL713787 TSC_hg19_v1_chr3_+_42190865	28339	+	TSC_hg19_v1_chr3_+_42201684 BX647199 NM_014965 BC015922 AK000754 AM392573 AM393596 CU677507 EU446989	39247	+	AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1##BX647199|TRAK1|22906|trafficking protein, kinesin binding 1##NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1##BC015922|TRAK1|22906|trafficking protein, kinesin binding 1##AK000754|TRAK1|22906|trafficking protein, kinesin binding 1##AM392573|TRAK1|22906|trafficking protein, kinesin binding 1##AM393596|TRAK1|22906|trafficking protein, kinesin binding 1##EU446989|TRAK1|22906|trafficking protein, kinesin binding 1	0.0	
chr4	71570175	71570350	reg1041089.p2	3.696	+	NM_020368 AF271212 TSC_hg19_v1_chr4_+_71554248 AK026909 BC004546 AL136590 AB463337 AM392862 AM393072 AM393229 DQ892999 EU176750 CU678762 CR533544	-15968	+	TSC_hg19_v1_chr4_-_71532347 NM_144646	-37916	-	AB527699 DQ884395 TSC_hg19_v1_chr4_-_71532226 AK312014 BC038982	-38028	-	TSC_hg19_v1_chr4_+_71570618 NM_001130709	372	+	TSC_hg19_v1_chr4_+_71570768 AK000911 AF112221	557	+	BC030809 TSC_hg19_v1_chr4_-_71571018	736	-	NM_020368|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AF271212|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AK026909|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##BC004546|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AL136590|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AM392862|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AM393072|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##AM393229|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##DQ892999|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##EU176750|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##CR533544|UTP3|57050|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)##NM_144646|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##DQ884395|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##AK312014|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##BC038982|IGJ|3512|immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides##NM_001130709|RUFY3|22902|RUN and FYVE domain containing 3##AK000911|RUFY3|22902|RUN and FYVE domain containing 3##AF112221|RUFY3|22902|RUN and FYVE domain containing 3##BC030809|LOC641510|641510|uncharacterized LOC641510	0.445367	CTCF.p2:98:0.445
chr5	142093085	142093173	reg1012912.p2	3.696	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-15558	-	M74028 NM_033136 AK312301	-27104	-	M60516 NM_000800	-27510	-	TSC_hg19_v1_chr5_+_142149971 BC068555	56843	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	57179	+	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	689694	-	M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##M74028|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033136|FGF1|2246|fibroblast growth factor 1 (acidic)##AK312301|FGF1|2246|fibroblast growth factor 1 (acidic)##M60516|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.997843	CTCF.p2:-4:0.998
chr5	32276816	32276925	reg1035828.p2	3.696	+	TSC_hg19_v1_chr5_-_32174429 BC033725 AK057544 AK075156 NM_022130	-102439	-	TSC_hg19_v1_chr5_-_32174396 AK092604	-102480	-	TSC_hg19_v1_chr5_-_32174383 AK301588 BC012123 AK293368	-102501	-	AB385495 CU691208 TSC_hg19_v1_chr5_-_32313046 BC057393 AB051469 AY028703	36135	-	TSC_hg19_v1_chr5_-_32313095 AK000483 NM_001040446	36263	-	TSC_hg19_v1_chr5_-_32388605 AK295297	111750	-	BC033725|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK057544|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK075156|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##NM_022130|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK092604|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK301588|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##BC012123|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK293368|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##BC057393|MTMR12|54545|myotubularin related protein 12##AB051469|MTMR12|54545|myotubularin related protein 12##AY028703|MTMR12|54545|myotubularin related protein 12##AK000483|MTMR12|54545|myotubularin related protein 12##NM_001040446|MTMR12|54545|myotubularin related protein 12##AK295297|ZFR|51663|zinc finger RNA binding protein	0.0	
chr7	28516865	28517045	reg1043070.p2	3.696	+	L05911 NM_004904	-41722	+	L05515 NM_182898	-64812	+	TSC_hg19_v1_chr7_+_28448986 BC087859	-67967	+	AK292916 TSC_hg19_v1_chr7_+_28530784	13810	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	208728	+	CU690330 TSC_hg19_v1_chr7_-_28997732	480742	-	L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##L05515|CREB5|9586|cAMP responsive element binding protein 5##NM_182898|CREB5|9586|cAMP responsive element binding protein 5##BC087859|LOC401317|401317|uncharacterized LOC401317##AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5	0.0	
chr8	2241477	2241575	reg1035818.p1	3.696	+	NM_003970 TSC_hg19_v1_chr8_+_1993158 AK297890 BC052969 X69089	-248324	+	TSC_hg19_v1_chr8_+_1952875 AF009203	-288618	+	TSC_hg19_v1_chr8_+_1950340 BC169332	-291174	+	AK128880 TSC_hg19_v1_chr8_-_2585966	344456	-	AY017307 TSC_hg19_v1_chr8_-_4852228	2610699	-	TSC_hg19_v1_chr8_-_4852262 AF333704 NM_033225	2610768	-	NM_003970|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AK297890|MYOM2|9172|myomesin (M-protein) 2, 165kDa##BC052969|MYOM2|9172|myomesin (M-protein) 2, 165kDa##X69089|MYOM2|9172|myomesin (M-protein) 2, 165kDa##AF009203|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##BC169332|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY017307|CSMD1|64478|CUB and Sushi multiple domains 1##AF333704|CSMD1|64478|CUB and Sushi multiple domains 1##NM_033225|CSMD1|64478|CUB and Sushi multiple domains 1	0.869978	CTCF.p2:15:0.870
chr9	37037155	37037330	reg1031044.p2	3.696	+	TSC_hg19_v1_chr9_-_37034361 NM_016734	-2826	-	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-464318	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-636067	-	TSC_hg19_v1_chr9_+_37079908 AK091718	42664	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	42766	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	83244	+	NM_016734|PAX5|5079|paired box 5##AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7	0.0	
chrX	67403807	67403894	reg1034657.p2	3.696	+	NM_001011645	-615168	+	TSC_hg19_v1_chrX_+_66766350 M20260	-637479	+	TSC_hg19_v1_chrX_+_66763874 NM_000044	-639975	+	TSC_hg19_v1_chrX_-_67653677 BC059393 NM_002547 AK309665 BC140763 AK295769 AJ001189 AK309696	249712	-	NM_001195214 NM_173834	314773	+	TSC_hg19_v1_chrX_+_67718892 AK095555 AK292835 BC012469 AK303992 AM393755	315038	+	NM_001011645|AR|367|androgen receptor##M20260|AR|367|androgen receptor##NM_000044|AR|367|androgen receptor##BC059393|OPHN1|4983|oligophrenin 1##NM_002547|OPHN1|4983|oligophrenin 1##AK309665|OPHN1|4983|oligophrenin 1##BC140763|OPHN1|4983|oligophrenin 1##AK295769|OPHN1|4983|oligophrenin 1##AJ001189|OPHN1|4983|oligophrenin 1##AK309696|OPHN1|4983|oligophrenin 1##NM_001195214|YIPF6|286451|Yip1 domain family, member 6##NM_173834|YIPF6|286451|Yip1 domain family, member 6##AK095555|YIPF6|286451|Yip1 domain family, member 6##AK292835|YIPF6|286451|Yip1 domain family, member 6##BC012469|YIPF6|286451|Yip1 domain family, member 6##AK303992|YIPF6|286451|Yip1 domain family, member 6##AM393755|YIPF6|286451|Yip1 domain family, member 6	0.86301	CTCF.p2:9:0.863
chr1	22379087	22379268	reg1035594.p2	3.695	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	-7	+	TSC_hg19_v1_chr1_+_22352003 AF161506 BC016053	-27165	+	BC005918 BC015103 D00306 NM_005747 BC007028 AK225620 AK308514 BC008383 CU675183 CU678941 DQ893182 DQ896490	-51020	+	TSC_hg19_v1_chr1_+_22379812 AL121737	628	+	AY009398 BT020125 AB590593 AB061675 AY358947 AF316543 NM_030761 BC057781	90334	-	AK091019 AK095273 AX746732 NM_001083621 NM_014870 TSC_hg19_v1_chr1_+_22778343	399167	+	NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AF161506|LINC00339|29092|long intergenic non-protein coding RNA 339##BC016053|LINC00339|29092|long intergenic non-protein coding RNA 339##BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A##D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AY009398|WNT4|54361|wingless-type MMTV integration site family, member 4##BT020125|WNT4|54361|wingless-type MMTV integration site family, member 4##AB061675|WNT4|54361|wingless-type MMTV integration site family, member 4##AY358947|WNT4|54361|wingless-type MMTV integration site family, member 4##AF316543|WNT4|54361|wingless-type MMTV integration site family, member 4##NM_030761|WNT4|54361|wingless-type MMTV integration site family, member 4##BC057781|WNT4|54361|wingless-type MMTV integration site family, member 4##AK091019|ZBTB40|9923|zinc finger and BTB domain containing 40##AK095273|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_001083621|ZBTB40|9923|zinc finger and BTB domain containing 40##NM_014870|ZBTB40|9923|zinc finger and BTB domain containing 40	0.0	
chr1	235263681	235263859	reg1029737.p2	3.695	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-367996	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-518524	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-519912	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	28319	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	28461	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	60793	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr12	46777203	46777322	reg1025239.p2	3.695	+	TSC_hg19_v1_chr12_-_46766619 NM_018976	-10659	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-10973	-	NM_001077484 NM_030674	-114055	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	442494	-	TSC_hg19_v1_chr12_+_47473404 BC072670	696135	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	696321	-	NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2	0.0	
chr12	72658494	72658595	reg1031819.p2	3.695	+	AY098914 NM_173353 BC114442 BC114499 AK094614	-325854	+	NM_001146213 NM_001146214 NM_022771 TSC_hg19_v1_chr12_+_72233538 AK022147 AK297626 AK307922 BC028352 AK225747 AL833639 AK225221 AK292306 AB449901	-425009	+	AB385582 AM393692 TSC_hg19_v1_chr12_+_72148987	-509596	+	TSC_hg19_v1_chr12_-_72666143 BC093901 BC093903	7634	-	AK095156 TSC_hg19_v1_chr12_-_72666355	7799	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	7960	+	AY098914|TPH2|121278|tryptophan hydroxylase 2##NM_173353|TPH2|121278|tryptophan hydroxylase 2##BC114442|TPH2|121278|tryptophan hydroxylase 2##BC114499|TPH2|121278|tryptophan hydroxylase 2##AK094614|TPH2|121278|tryptophan hydroxylase 2##NM_001146213|TBC1D15|64786|TBC1 domain family, member 15##NM_001146214|TBC1D15|64786|TBC1 domain family, member 15##NM_022771|TBC1D15|64786|TBC1 domain family, member 15##AK022147|TBC1D15|64786|TBC1 domain family, member 15##AK297626|TBC1D15|64786|TBC1 domain family, member 15##AK307922|TBC1D15|64786|TBC1 domain family, member 15##BC028352|TBC1D15|64786|TBC1 domain family, member 15##AK225747|TBC1D15|64786|TBC1 domain family, member 15##AL833639|TBC1D15|64786|TBC1 domain family, member 15##AK225221|TBC1D15|64786|TBC1 domain family, member 15##AK292306|TBC1D15|64786|TBC1 domain family, member 15##AB449901|TBC1D15|64786|TBC1 domain family, member 15##AM393692|RAB21|23011|RAB21, member RAS oncogene family##BC093901|LOC283392|283392|uncharacterized LOC283392##BC093903|LOC283392|283392|uncharacterized LOC283392##AK095156|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme	0.988236	CTCF.p2:-8:0.988
chr14	106162780	106162909	reg1030665.p1	3.695	+	TSC_hg19_v1_chr14_-_106111114 AJ294731	-51728	-	BC040042 TSC_hg19_v1_chr14_-_106110945	-51921	-	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	-70508	-	TSC_hg19_v1_chr14_-_106174914 BC113815 AJ294729	12109	-	TSC_hg19_v1_chr14_-_106208542 AF487336	45705	-	AF150959 TSC_hg19_v1_chr14_-_106208714 S76144	45866	-	AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##AJ294729|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.0	
chr17	76333692	76333845	reg1030814.p1	3.695	+	BC042066 NM_001204210 NM_001204211 NM_001204212 BC148207	-106305	+	TSC_hg19_v1_chr17_+_76210353 AK223428 BC000784 BC034148 AY927772 BC002388 BC008718 HM625836 AB028869 AF077350 AK311917 BC065497 AB590059 AM393128 AB154416 AY830084 CR541740 DQ227257 DQ310375 DQ310376 DQ310377 DQ310378 DQ310379 DQ508249 DQ508245 DQ508246 DQ508247 DQ508248	-123371	+	NM_001012270 NM_001012271 NM_001168 TSC_hg19_v1_chr17_+_76210320 AK301793	-123469	+	TSC_hg19_v1_chr17_-_76356159 AK309756 AK314212 BC060858 NM_003955	22389	-	TSC_hg19_v1_chr17_+_76374729 AK316147 AK307874 AK296882 AK024529 AK225030 AK316405 BC108732 NM_024419 BC035662 AK297156 BC008903 BC015570 BC025951	40962	+	NM_173628	239707	-	BC042066|TMEM235|283999|transmembrane protein 235##NM_001204210|TMEM235|283999|transmembrane protein 235##NM_001204211|TMEM235|283999|transmembrane protein 235##NM_001204212|TMEM235|283999|transmembrane protein 235##BC148207|TMEM235|283999|transmembrane protein 235##AK223428|BIRC5|332|baculoviral IAP repeat containing 5##BC000784|BIRC5|332|baculoviral IAP repeat containing 5##BC034148|BIRC5|332|baculoviral IAP repeat containing 5##AY927772|BIRC5|332|baculoviral IAP repeat containing 5##BC008718|BIRC5|332|baculoviral IAP repeat containing 5##HM625836|BIRC5|332|baculoviral IAP repeat containing 5##AB028869|BIRC5|332|baculoviral IAP repeat containing 5##AF077350|BIRC5|332|baculoviral IAP repeat containing 5##AK311917|BIRC5|332|baculoviral IAP repeat containing 5##BC065497|BIRC5|332|baculoviral IAP repeat containing 5##AM393128|BIRC5|332|baculoviral IAP repeat containing 5##AB154416|BIRC5|332|baculoviral IAP repeat containing 5##AY830084|BIRC5|332|baculoviral IAP repeat containing 5##CR541740|BIRC5|332|baculoviral IAP repeat containing 5##DQ227257|BIRC5|332|baculoviral IAP repeat containing 5##DQ310375|BIRC5|332|baculoviral IAP repeat containing 5##DQ310376|BIRC5|332|baculoviral IAP repeat containing 5##DQ310377|BIRC5|332|baculoviral IAP repeat containing 5##DQ310378|BIRC5|332|baculoviral IAP repeat containing 5##DQ310379|BIRC5|332|baculoviral IAP repeat containing 5##DQ508249|BIRC5|332|baculoviral IAP repeat containing 5##DQ508245|BIRC5|332|baculoviral IAP repeat containing 5##DQ508246|BIRC5|332|baculoviral IAP repeat containing 5##DQ508247|BIRC5|332|baculoviral IAP repeat containing 5##DQ508248|BIRC5|332|baculoviral IAP repeat containing 5##NM_001012270|BIRC5|332|baculoviral IAP repeat containing 5##NM_001012271|BIRC5|332|baculoviral IAP repeat containing 5##NM_001168|BIRC5|332|baculoviral IAP repeat containing 5##AK301793|BIRC5|332|baculoviral IAP repeat containing 5##AK309756|SOCS3|9021|suppressor of cytokine signaling 3##AK314212|SOCS3|9021|suppressor of cytokine signaling 3##BC060858|SOCS3|9021|suppressor of cytokine signaling 3##NM_003955|SOCS3|9021|suppressor of cytokine signaling 3##AK316147|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK307874|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK296882|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK024529|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK225030|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK316405|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC108732|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_024419|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC035662|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK297156|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC008903|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC015570|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC025951|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17	0.306973	CTCF.p2:-89:0.307
chr17	76718564	76718745	reg1041547.p2	3.695	+	NM_173628	-145179	-	TSC_hg19_v1_chr17_+_76374729 AK316147 AK307874 AK296882 AK024529 AK225030 AK316405 BC108732 NM_024419 BC035662 AK297156 BC008903 BC015570 BC025951	-343924	+	TSC_hg19_v1_chr17_-_76356159 AK309756 AK314212 BC060858 NM_003955	-362497	-	AK316277 TSC_hg19_v1_chr17_-_76719649	993	-	TSC_hg19_v1_chr17_-_76719676 AK293894	1097	-	TSC_hg19_v1_chr17_-_76732958 AK311535	14344	-	NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17##AK316147|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK307874|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK296882|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK024529|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK225030|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK316405|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC108732|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_024419|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC035662|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK297156|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC008903|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC015570|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC025951|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK309756|SOCS3|9021|suppressor of cytokine signaling 3##AK314212|SOCS3|9021|suppressor of cytokine signaling 3##BC060858|SOCS3|9021|suppressor of cytokine signaling 3##NM_003955|SOCS3|9021|suppressor of cytokine signaling 3##AK316277|CYTH1|9267|cytohesin 1##AK293894|CYTH1|9267|cytohesin 1	0.0	
chr18	41678866	41678966	reg1015117.p2	3.695	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-821487	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-983347	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-2143683	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	581198	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	581952	+	NM_001242692 AK292422	1114036	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.137125	
chr2	175552733	175552913	reg1011406.p1	3.695	+	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	-5069	-	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	-53526	-	TSC_hg19_v1_chr2_-_175462533 BC002914 X86019	-90342	-	TSC_hg19_v1_chr2_+_175584527 DQ895855	31755	+	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	76346	-	AK055060 NM_001206602	159487	-	BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1##AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1##X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1##DQ895855|H3F3A|3020|H3 histone, family 3A##AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1	0.0	
chr2	84044784	84044881	reg1036208.p1	3.695	+	TSC_hg19_v1_chr2_-_80531838 AK225779	-3512989	-	TSC_hg19_v1_chr2_-_80531719 AK290512	-3513107	-	BC045113 NM_178839 AK056644 TSC_hg19_v1_chr2_-_80531561	-3513307	-	CR457139 TSC_hg19_v1_chr2_-_84686373 Z68204 AK225737 AK313290 AF104921 AK291082 BC000504	641538	-	AK296741 TSC_hg19_v1_chr2_-_84686396	641563	-	NM_003849	641753	-	AK225779|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK290512|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##BC045113|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##NM_178839|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##AK056644|LRRTM1|347730|leucine rich repeat transmembrane neuronal 1##CR457139|SUCLG1|8802|succinate-CoA ligase, alpha subunit##Z68204|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK225737|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK313290|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AF104921|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK291082|SUCLG1|8802|succinate-CoA ligase, alpha subunit##BC000504|SUCLG1|8802|succinate-CoA ligase, alpha subunit##AK296741|SUCLG1|8802|succinate-CoA ligase, alpha subunit##NM_003849|SUCLG1|8802|succinate-CoA ligase, alpha subunit	0.980221	CTCF.p2:2:0.980
chr9	140172091	140172216	reg1031233.p1	3.695	+	TSC_hg19_v1_chr9_+_140149888 AF464935 AB384577 AM393289	-22230	+	TSC_hg19_v1_chr9_+_140149768 BC019029	-22354	+	TSC_hg19_v1_chr9_+_140149758 AK091056 AX746754 NM_015456	-22394	+	TSC_hg19_v1_chr9_+_140172277 AK000252 NM_017723	132	+	BC053618 NM_001004354 TSC_hg19_v1_chr9_-_140196724	24567	-	BC065002 TSC_hg19_v1_chr9_-_140317615 BC110879 AK000440 AK094438 BC039252 BC037355	145457	-	AF464935|COBRA1|25920|cofactor of BRCA1##AM393289|COBRA1|25920|cofactor of BRCA1##BC019029|COBRA1|25920|cofactor of BRCA1##AK091056|COBRA1|25920|cofactor of BRCA1##NM_015456|COBRA1|25920|cofactor of BRCA1##AK000252|C9orf167|54863|chromosome 9 open reading frame 167##NM_017723|C9orf167|54863|chromosome 9 open reading frame 167##BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein##NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein##BC065002|EXD3|54932|exonuclease 3'-5' domain containing 3##BC110879|EXD3|54932|exonuclease 3'-5' domain containing 3##AK000440|EXD3|54932|exonuclease 3'-5' domain containing 3##AK094438|EXD3|54932|exonuclease 3'-5' domain containing 3##BC039252|EXD3|54932|exonuclease 3'-5' domain containing 3##BC037355|EXD3|54932|exonuclease 3'-5' domain containing 3	0.0	
chrX	67458529	67458666	reg1034202.p2	3.695	+	NM_001011645	-669915	+	TSC_hg19_v1_chrX_+_66766350 M20260	-692226	+	TSC_hg19_v1_chrX_+_66763874 NM_000044	-694722	+	TSC_hg19_v1_chrX_-_67653677 BC059393 NM_002547 AK309665 BC140763 AK295769 AJ001189 AK309696	194965	-	NM_001195214 NM_173834	260026	+	TSC_hg19_v1_chrX_+_67718892 AK095555 AK292835 BC012469 AK303992 AM393755	260291	+	NM_001011645|AR|367|androgen receptor##M20260|AR|367|androgen receptor##NM_000044|AR|367|androgen receptor##BC059393|OPHN1|4983|oligophrenin 1##NM_002547|OPHN1|4983|oligophrenin 1##AK309665|OPHN1|4983|oligophrenin 1##BC140763|OPHN1|4983|oligophrenin 1##AK295769|OPHN1|4983|oligophrenin 1##AJ001189|OPHN1|4983|oligophrenin 1##AK309696|OPHN1|4983|oligophrenin 1##NM_001195214|YIPF6|286451|Yip1 domain family, member 6##NM_173834|YIPF6|286451|Yip1 domain family, member 6##AK095555|YIPF6|286451|Yip1 domain family, member 6##AK292835|YIPF6|286451|Yip1 domain family, member 6##BC012469|YIPF6|286451|Yip1 domain family, member 6##AK303992|YIPF6|286451|Yip1 domain family, member 6##AM393755|YIPF6|286451|Yip1 domain family, member 6	0.283481	CTCF.p2:8:0.283
chr15	31897736	31897883	reg1039703.p1	3.694	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-278471	+	NM_001243538	-374760	-	GQ502181 HM135791 NM_001252020	-444381	-	AJ430383 NM_130901	49732	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	265020	-	TSC_hg19_v1_chr15_-_32162898 AK126002	265134	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.150991	
chr2	102975110	102975239	reg1032756.p1	3.694	+	BC012580 BC030975 NM_003856 AK291578 AB029084	-21443	+	AB012701 NM_016232 AK313967 AK303389	-47183	+	AF284434 NM_003854 U49065 BC107064	-171726	+	BC069575 BC093975 BC093977 BC143403 BC143405 NM_003855 U43672 AB590640 AY192162	3934	+	AK300026 AF077346 NM_003853	60026	+	CR627411 NM_001011552	114587	+	BC012580|IL1RL1|9173|interleukin 1 receptor-like 1##BC030975|IL1RL1|9173|interleukin 1 receptor-like 1##NM_003856|IL1RL1|9173|interleukin 1 receptor-like 1##AK291578|IL1RL1|9173|interleukin 1 receptor-like 1##AB029084|IL1RL1|9173|interleukin 1 receptor-like 1##AB012701|IL1RL1|9173|interleukin 1 receptor-like 1##NM_016232|IL1RL1|9173|interleukin 1 receptor-like 1##AK313967|IL18R1|8809|interleukin 18 receptor 1##AK303389|IL1RL1|9173|interleukin 1 receptor-like 1##AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2##BC069575|IL18R1|8809|interleukin 18 receptor 1##BC093975|IL18R1|8809|interleukin 18 receptor 1##BC093977|IL18R1|8809|interleukin 18 receptor 1##BC143403|IL18R1|8809|interleukin 18 receptor 1##BC143405|IL18R1|8809|interleukin 18 receptor 1##NM_003855|IL18R1|8809|interleukin 18 receptor 1##U43672|IL18R1|8809|interleukin 18 receptor 1##AY192162|IL18R1|8809|interleukin 18 receptor 1##AK300026|IL18RAP|8807|interleukin 18 receptor accessory protein##AF077346|IL18RAP|8807|interleukin 18 receptor accessory protein##NM_003853|IL18RAP|8807|interleukin 18 receptor accessory protein##CR627411|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4##NM_001011552|SLC9A4|389015|solute carrier family 9 (sodium/hydrogen exchanger), member 4	0.281844	CTCF.p2:-14:0.282
chr2	65662863	65663028	reg1035558.p1	3.694	+	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	-3269	-	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	-3733	-	TSC_hg19_v1_chr2_-_65593867 NM_001128210	-69047	-	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	892	+	AL832770 BC043503 NM_002398	999578	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	999895	+	BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_001128210|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein##AL832770|MEIS1|4211|Meis homeobox 1##BC043503|MEIS1|4211|Meis homeobox 1##NM_002398|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1	0.034897	
chr4	10162058	10162138	reg1034917.p1	3.694	+	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-43562	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-43620	-	AK222764 AK225276 TSC_hg19_v1_chr4_-_10118453	-43648	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	296912	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	524303	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	1268434	-	NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##AK222764|WDR1|9948|WD repeat domain 1##AK225276|WDR1|9948|WD repeat domain 1##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1	0.92851	CTCF.p2:-7:0.929
chr4	11429829	11430009	reg1010618.p1	3.694	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-743518	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-970909	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-1311383	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	613	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2056032	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2056056	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.05743	
chr10	122829968	122830052	reg1039762.p1	3.693	+	TSC_hg19_v1_chr10_+_122610873 BC040469 AB037772 AK299524 AF320223 AK301761 BC071564 AK315145 AB385454	-219115	+	NM_018117 TSC_hg19_v1_chr10_+_122610771	-219282	+	NM_001030059 TSC_hg19_v1_chr10_+_122216486 BC101267 BC101268 BC101269 BC122535 BC132787 AK296273 HQ258170 AK310178	-613371	+	AB084153 EF057068 EU826598 EU826599 EU826600 EU826601 AB587574 M55614 Z71929 X56191 NM_001144913 NM_001144914	523395	-	AK308621 NM_001144916	523761	-	AK294026 NM_001144915	526148	-	BC040469|WDR11|55717|WD repeat domain 11##AB037772|WDR11|55717|WD repeat domain 11##AK299524|WDR11|55717|WD repeat domain 11##AF320223|WDR11|55717|WD repeat domain 11##AK301761|WDR11|55717|WD repeat domain 11##BC071564|WDR11|55717|WD repeat domain 11##AK315145|WDR11|55717|WD repeat domain 11##NM_018117|WDR11|55717|WD repeat domain 11##NM_001030059|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101267|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101268|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC101269|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC122535|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##BC132787|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##HQ258170|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AK310178|PPAPDC1A|196051|phosphatidic acid phosphatase type 2 domain containing 1A##AB084153|FGFR2|2263|fibroblast growth factor receptor 2##EF057068|FGFR2|2263|fibroblast growth factor receptor 2##EU826598|FGFR2|2263|fibroblast growth factor receptor 2##EU826599|FGFR2|2263|fibroblast growth factor receptor 2##EU826600|FGFR2|2263|fibroblast growth factor receptor 2##EU826601|FGFR2|2263|fibroblast growth factor receptor 2##M55614|FGFR2|2263|fibroblast growth factor receptor 2##Z71929|FGFR2|2263|fibroblast growth factor receptor 2##X56191|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144913|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144914|FGFR2|2263|fibroblast growth factor receptor 2##AK308621|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144916|FGFR2|2263|fibroblast growth factor receptor 2##AK294026|FGFR2|2263|fibroblast growth factor receptor 2##NM_001144915|FGFR2|2263|fibroblast growth factor receptor 2	0.977986	CTCF.p2:-17:0.978
chr10	3827700	3827813	reg1040449.p2	3.693	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-247	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-445	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-612751	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1040662	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1177758	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1177867	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr11	118712247	118712427	reg1037275.p1	3.693	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-50403	-	TSC_hg19_v1_chr11_-_118661865 Z11685	-50458	-	TSC_hg19_v1_chr11_-_118661860 BC026228	-50478	-	AK291512 NM_001716 BC110352 X68149 AB464488	42223	+	NM_032966 X68829	51763	+	AB094091 NM_182557	69275	-	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like	0.0	
chr11	17084880	17085054	reg1002025.p1	3.693	+	AB385210 TSC_hg19_v1_chr11_-_17035962 BC071599 NM_175058	-49002	-	TSC_hg19_v1_chr11_-_16996590 D28414	-88391	-	TSC_hg19_v1_chr11_+_16760204 BC103747 AK315382 BC007103 BC016352 BC020937 U51678 CR456882 CU675547 AK124165	-324683	+	X79239 AB528349 CU688732 TSC_hg19_v1_chr11_-_17099216 DQ891107 DQ894288 BC000475 BC029732 BC100032 BC006772 AK312060 BC066322 D28429 L01124 NM_001017	14272	-	Y13367 AB385161 HQ258691 BC113658 NM_002645	106353	-	TSC_hg19_v1_chr11_-_17229534 AK309610 AK299474 AK304262 BC040952 BC031681 AK294416 BC035982 AK310248	144530	-	BC071599|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##NM_175058|PLEKHA7|144100|pleckstrin homology domain containing, family A member 7##D28414|RPL36A|6173|ribosomal protein L36a##BC103747|C11orf58|10944|chromosome 11 open reading frame 58##AK315382|C11orf58|10944|chromosome 11 open reading frame 58##BC007103|C11orf58|10944|chromosome 11 open reading frame 58##BC016352|C11orf58|10944|chromosome 11 open reading frame 58##BC020937|C11orf58|10944|chromosome 11 open reading frame 58##U51678|C11orf58|10944|chromosome 11 open reading frame 58##CR456882|C11orf58|10944|chromosome 11 open reading frame 58##X79239|RPS13|6207|ribosomal protein S13##DQ891107|RPS13|6207|ribosomal protein S13##DQ894288|RPS13|6207|ribosomal protein S13##BC000475|RPS13|6207|ribosomal protein S13##BC029732|RPS13|6207|ribosomal protein S13##BC100032|RPS13|6207|ribosomal protein S13##BC006772|RPS13|6207|ribosomal protein S13##AK312060|RPS13|6207|ribosomal protein S13##BC066322|RPS13|6207|ribosomal protein S13##L01124|RPS13|6207|ribosomal protein S13##NM_001017|RPS13|6207|ribosomal protein S13##Y13367|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##HQ258691|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##BC113658|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##NM_002645|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK309610|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK299474|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK304262|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##BC040952|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##BC031681|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK294416|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide##AK310248|PIK3C2A|5286|phosphoinositide-3-kinase, class 2, alpha polypeptide	0.0	
chr11	47021471	47021550	reg1035841.p2	3.693	+	TSC_hg19_v1_chr11_+_46958328 AK316318 NM_001003676 NM_001003677 NM_001003678 NM_024113 AK315639 BC001860 BC009455 AL136575 BC052291 BC013988 AK300813 AK025863 AK293609 AB528079 AM393584 AM393807 CR457351 CU679361 CU680726	-63218	+	TSC_hg19_v1_chr11_-_46940102 AB384531 AB231861 BC136667 BC136668 AB084910 NM_002334 BC110808	-81448	-	TSC_hg19_v1_chr11_-_46867841 NM_001008938 NM_014756	-153657	-	AK301785 AL834337 EU832352 EU832437 AK300347 BC036823 AK027482 TSC_hg19_v1_chr11_-_47198413 AK304541 BC030148	176889	-	TSC_hg19_v1_chr11_-_47198431 AK315992 AK098324	176923	-	NM_001242832 NM_032389	177165	-	AK316318|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003676|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003677|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003678|C11orf49|79096|chromosome 11 open reading frame 49##NM_024113|C11orf49|79096|chromosome 11 open reading frame 49##AK315639|C11orf49|79096|chromosome 11 open reading frame 49##BC001860|C11orf49|79096|chromosome 11 open reading frame 49##BC009455|C11orf49|79096|chromosome 11 open reading frame 49##AL136575|C11orf49|79096|chromosome 11 open reading frame 49##BC052291|C11orf49|79096|chromosome 11 open reading frame 49##BC013988|C11orf49|79096|chromosome 11 open reading frame 49##AK300813|C11orf49|79096|chromosome 11 open reading frame 49##AK025863|C11orf49|79096|chromosome 11 open reading frame 49##AK293609|C11orf49|79096|chromosome 11 open reading frame 49##AM393584|C11orf49|79096|chromosome 11 open reading frame 49##AM393807|C11orf49|79096|chromosome 11 open reading frame 49##CR457351|C11orf49|79096|chromosome 11 open reading frame 49##AB231861|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136667|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136668|LRP4|4038|low density lipoprotein receptor-related protein 4##AB084910|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_002334|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_001008938|CKAP5|9793|cytoskeleton associated protein 5##NM_014756|CKAP5|9793|cytoskeleton associated protein 5##AK301785|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AL834337|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832352|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832437|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300347|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC036823|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK027482|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK304541|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC030148|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK315992|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK098324|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_001242832|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_032389|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2	0.0	
chr13	99984433	99984558	reg1035321.p1	3.693	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-24797	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-73881	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-131376	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	169205	+	TSC_hg19_v1_chr13_+_100153777 BC130293	169287	+	BC041830 TSC_hg19_v1_chr13_+_100229390	244882	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.0	
chr15	73576571	73576699	reg1036132.p2	3.693	+	NM_001172623 NM_001172624 NM_002499 U61262 U72391 BC117161 BC143270 BC143271 BC143279 AB528479	-231715	+	TSC_hg19_v1_chr15_-_73076118 AK055526 NM_031284	-500512	-	BC044589 TSC_hg19_v1_chr15_-_73076072	-500564	-	TSC_hg19_v1_chr15_-_73661207 AJ132429 DQ854814	84572	-	AJ238850 NM_005477	84969	-	NM_001042367 AK131030 BC055412	158874	+	NM_001172623|NEO1|4756|neogenin 1##NM_001172624|NEO1|4756|neogenin 1##NM_002499|NEO1|4756|neogenin 1##U61262|NEO1|4756|neogenin 1##U72391|NEO1|4756|neogenin 1##BC117161|NEO1|4756|neogenin 1##BC143270|NEO1|4756|neogenin 1##BC143271|NEO1|4756|neogenin 1##BC143279|NEO1|4756|neogenin 1##AK055526|ADPGK|83440|ADP-dependent glucokinase##NM_031284|ADPGK|83440|ADP-dependent glucokinase##BC044589|ADPGK|83440|ADP-dependent glucokinase##AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60##AK131030|C15orf60|283677|chromosome 15 open reading frame 60##BC055412|C15orf60|283677|chromosome 15 open reading frame 60	0.0	
chr16	75590135	75590286	reg1033448.p2	3.693	+	CU679755 TSC_hg19_v1_chr16_-_75590137 AK096650 NM_001077416 BC010609 AK307263 AK025820 BC063677 AY358612 AK290483 NM_001077418 NM_001077419	-44	-	AF246718 NM_024533	-21143	-	TSC_hg19_v1_chr16_-_75529303 AK311527 AK093904	-60913	-	AB030710 NM_007285 TSC_hg19_v1_chr16_+_75600274 BC029601	10051	+	AK289788 TSC_hg19_v1_chr16_+_75600276 AF087848 AK311266 AF077046 AJ010569 BC014594 BC005985 AB463663 AM393324 DQ893101 DQ896373 CR542217	10120	+	AK001687 AK314652 TSC_hg19_v1_chr16_-_75657163 BC002758 AK296834 NM_012091	66976	-	AK096650|TMEM231|79583|transmembrane protein 231##NM_001077416|TMEM231|79583|transmembrane protein 231##BC010609|TMEM231|79583|transmembrane protein 231##AK307263|TMEM231|79583|transmembrane protein 231##AK025820|TMEM231|79583|transmembrane protein 231##BC063677|TMEM231|79583|transmembrane protein 231##AY358612|TMEM231|79583|transmembrane protein 231##AK290483|TMEM231|79583|transmembrane protein 231##NM_001077418|TMEM231|79583|transmembrane protein 231##NM_001077419|TMEM231|79583|transmembrane protein 231##AF246718|CHST5|23563|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5##NM_024533|CHST5|23563|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5##AB030710|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##NM_007285|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC029601|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AK289788|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AF087848|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AK311266|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AF077046|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AJ010569|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC014594|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC005985|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AM393324|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##DQ893101|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##DQ896373|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##CR542217|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AK001687|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AK314652|ADAT1|23536|adenosine deaminase, tRNA-specific 1##BC002758|ADAT1|23536|adenosine deaminase, tRNA-specific 1##AK296834|ADAT1|23536|adenosine deaminase, tRNA-specific 1##NM_012091|ADAT1|23536|adenosine deaminase, tRNA-specific 1	0.0	
chr17	55446568	55446732	reg1031927.p2	3.693	+	AK093888 AX748353 NM_170721	-112277	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-112677	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-283507	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	480754	-	AK000746 NM_017949	534099	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	586026	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.073989	
chr18	43998634	43998779	reg1039244.p1	3.693	+	AK091537 AK122819 AK127467 AX747044 NM_152470	-84520	+	TSC_hg19_v1_chr18_+_43913942 AK055997	-84774	+	TSC_hg19_v1_chr18_+_43754065 AK289738	-244624	+	AK057232 BC047720 NM_001145473 NM_001173129	100334	-	BC041860 AK302484 NM_001145472	140554	-	NM_144612	238289	-	AK091537|RNF165-IT1|147341|RNF165 intronic transcript 1 (non-protein coding)##AK122819|RNF165|494470|ring finger protein 165##AK127467|RNF165|494470|ring finger protein 165##NM_152470|RNF165|494470|ring finger protein 165##AK055997|RNF165|494470|ring finger protein 165##AK289738|C18orf25|147339|chromosome 18 open reading frame 25##AK057232|LOXHD1|125336|lipoxygenase homology domains 1##BC047720|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145473|LOXHD1|125336|lipoxygenase homology domains 1##NM_001173129|LOXHD1|125336|lipoxygenase homology domains 1##BC041860|LOXHD1|125336|lipoxygenase homology domains 1##AK302484|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145472|LOXHD1|125336|lipoxygenase homology domains 1##NM_144612|LOXHD1|125336|lipoxygenase homology domains 1	0.0	
chr18	61771387	61771464	reg1037846.p2	3.693	+	NM_001031848 NM_002640 NM_198833 AK300391 L40377 TSC_hg19_v1_chr18_+_61637345 BC034528 U92984 BX571754 AK313782	-134112	+	NM_001123366	-154838	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	-188681	+	AJ007611 NM_033646	1646062	+	TSC_hg19_v1_chr18_+_63417845 BC036786	1646441	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	1646777	+	NM_001031848|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_002640|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_198833|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK300391|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##L40377|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BC034528|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##U92984|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BX571754|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK313782|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2	0.122192	
chr4	36179739	36179848	reg1041999.p1	3.693	+	TSC_hg19_v1_chr4_+_30722465 AB006756	-5457334	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-5457599	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	-5457794	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	66244	-	AK131492 NM_001136536 AK304357 AK316523	103453	+	BC157885 NM_001170700	105850	+	AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1	0.0	
chr5	171710114	171710273	reg1015478.p1	3.693	+	NM_001171183	-89018	+	TSC_hg19_v1_chr5_-_171615363 NM_005990	-94821	-	TSC_hg19_v1_chr5_-_171615241 BC070077 AK313350	-94920	-	BC019910 TSC_hg19_v1_chr5_-_171710765 AK313274	511	-	NM_152277 TSC_hg19_v1_chr5_-_171710808	622	-	AB430862 DQ109556 BC038561 TSC_hg19_v1_chr5_-_171881387	171178	-	NM_001171183|EFCAB9|285588|EF-hand calcium binding domain 9##NM_005990|STK10|6793|serine/threonine kinase 10##BC070077|STK10|6793|serine/threonine kinase 10##AK313350|STK10|6793|serine/threonine kinase 10##BC019910|UBTD2|92181|ubiquitin domain containing 2##AK313274|UBTD2|92181|ubiquitin domain containing 2##NM_152277|UBTD2|92181|ubiquitin domain containing 2##AB430862|SH3PXD2B|285590|SH3 and PX domains 2B##DQ109556|SH3PXD2B|285590|SH3 and PX domains 2B##BC038561|SH3PXD2B|285590|SH3 and PX domains 2B	0.016456	
chr5	53259948	53260069	reg1043112.p1	3.693	+	TSC_hg19_v1_chr5_+_52856474 AF020351 AK307973 CU675075	-403522	+	TSC_hg19_v1_chr5_+_52856468 NM_002495 BC005270	-403544	+	TSC_hg19_v1_chr5_+_52776479 AB451330 AB451474 CR541813 DQ893433 DQ896745	-483458	+	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	346317	-	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	346394	-	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	491516	+	AF020351|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK307973|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##NM_002495|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##BC005270|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AB451330|FST|10468|follistatin##AB451474|FST|10468|follistatin##CR541813|FST|10468|follistatin##DQ893433|FST|10468|follistatin##DQ896745|FST|10468|follistatin##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3	0.951361	CTCF.p2:-10:0.951
chr8	94139984	94140088	reg1035482.p1	3.693	+	NM_001191035 TSC_hg19_v1_chr8_-_93978373 BC031029 AK097956 BC110326 DQ351291 NM_001171795 NM_001171796 NM_001171797 NM_001171798 NM_001171799	-161714	-	AK096398 NM_001191036	-162271	-	NM_001198633 NM_175634 TSC_hg19_v1_chr8_-_93115455	-1024581	-	BC089453 NM_001242668	39042	-	BC037909 TSC_hg19_v1_chr8_-_94712710	572650	-	BC014598 TSC_hg19_v1_chr8_+_94712788 BC108707 NM_145269 CR627475 DQ327715 DQ327716 AK096298 CU677061	572768	+	NM_001191035|C8orf83|286144|chromosome 8 open reading frame 83##BC031029|C8orf83|286144|chromosome 8 open reading frame 83##AK097956|C8orf83|286144|chromosome 8 open reading frame 83##BC110326|C8orf83|286144|chromosome 8 open reading frame 83##DQ351291|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171795|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171796|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171797|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171798|C8orf83|286144|chromosome 8 open reading frame 83##NM_001171799|C8orf83|286144|chromosome 8 open reading frame 83##AK096398|C8orf83|286144|chromosome 8 open reading frame 83##NM_001191036|C8orf83|286144|chromosome 8 open reading frame 83##NM_001198633|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##NM_175634|RUNX1T1|862|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)##BC089453|LOC389676|389676|uncharacterized LOC389676##NM_001242668|LOC389676|389676|uncharacterized LOC389676##BC037909|LOC642924|642924|uncharacterized LOC642924##BC014598|FAM92A1|137392|family with sequence similarity 92, member A1##BC108707|FAM92A1|137392|family with sequence similarity 92, member A1##NM_145269|FAM92A1|137392|family with sequence similarity 92, member A1##CR627475|FAM92A1|137392|family with sequence similarity 92, member A1##DQ327715|FAM92A1|137392|family with sequence similarity 92, member A1##DQ327716|FAM92A1|137392|family with sequence similarity 92, member A1##AK096298|FAM92A1|137392|family with sequence similarity 92, member A1	0.117561	
chr11	3875804	3875898	reg1006669.p1	3.692	+	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	-13652	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	-13696	-	NM_014489 AF159615	-46077	+	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	1078	+	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	240138	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	240215	+	X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##NM_014489|PGAP2|27315|post-GPI attachment to proteins 2##AF159615|PGAP2|27315|post-GPI attachment to proteins 2##NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1	0.0	
chr13	60784802	60784868	reg1039218.p1	3.692	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-46734	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	-46854	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	-197515	-	BX537910 NM_001146071 NM_030794	185755	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	186644	+	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	1204418	-	NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20	0.0	
chr15	41187141	41187263	reg1001968.p4	3.692	+	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	-502	+	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	-20755	-	TSC_hg19_v1_chr15_+_41136676 NM_001032367 AK303899 BC004140 BT007425 CU676280 DQ890747 DQ892293 DQ895493	-50501	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	34496	+	NM_001142776 NM_024111 TSC_hg19_v1_chr15_+_41245671 BC019625 BC001683 BC001847 AY702027	58502	+	TSC_hg19_v1_chr15_-_41364176 AK057582	177002	-	AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)##NM_001142776|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##NM_024111|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC019625|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001683|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##BC001847|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AY702027|CHAC1|79094|ChaC, cation transport regulator homolog 1 (E. coli)##AK057582|INO80|54617|INO80 homolog (S. cerevisiae)	0.0	
chr16	15010825	15010931	reg1036455.p1	3.692	+	TSC_hg19_v1_chr16_+_14927721 X57398	-83118	+	TSC_hg19_v1_chr16_+_14927651 NM_014287 BC065535	-83235	+	BC106731 BC106732 BC111804 NM_003561 U95301	-222401	-	AB528194 AF132984 NM_006985	20421	+	NM_015027 TSC_hg19_v1_chr16_+_15068894 BC045554 BC053946	57988	+	TSC_hg19_v1_chr16_+_15068931 BC033748	58061	+	X57398|NOMO1|23420|NODAL modulator 1##NM_014287|NOMO1|23420|NODAL modulator 1##BC065535|NOMO1|23420|NODAL modulator 1##BC106731|PLA2G10|8399|phospholipase A2, group X##BC106732|PLA2G10|8399|phospholipase A2, group X##BC111804|PLA2G10|8399|phospholipase A2, group X##NM_003561|PLA2G10|8399|phospholipase A2, group X##U95301|PLA2G10|8399|phospholipase A2, group X##AF132984|NPIP|9284|nuclear pore complex interacting protein##NM_006985|NPIP|9284|nuclear pore complex interacting protein##NM_015027|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC045554|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC053946|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC033748|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1	0.681963	CTCF.p2:2:0.682
chr7	130005727	130005887	reg1029142.p2	3.692	+	NM_001127441 NM_001127442 NM_080385 AK093288 AK315256 AX748034 BC039362 AY155230 BC053681 BC042996 AK131191 AY155229	-21143	+	AK290993 NM_001163446 NM_016352 BC052289 AK310933 AK298553 AK298550 AK299023 AY358699 AF095719 AB590729 CU690898 HQ448429	-72811	+	BC007009 NM_001869 BC014571 BC015140 AK293378 U19977 DQ893811 CU675491 BT007403	-99093	+	NM_001868 AK131054 AK291493 AK293366 BC005279 X67318 CU675077 DQ890565 DQ893728 BT007313	14518	+	BC056162 AK314676 TSC_hg19_v1_chr7_-_130080886 BC018789 AK026098 AJ278890 NM_018718 AK298618 AK311382 AF429308 AF429309	75070	-	TSC_hg19_v1_chr7_+_130126173 AK098397 NM_177524 CR627364 BC090049	120309	+	NM_001127441|CPA5|93979|carboxypeptidase A5##NM_001127442|CPA5|93979|carboxypeptidase A5##NM_080385|CPA5|93979|carboxypeptidase A5##AK093288|CPA5|93979|carboxypeptidase A5##AK315256|CPA5|93979|carboxypeptidase A5##BC039362|CPA5|93979|carboxypeptidase A5##AY155230|CPA5|93979|carboxypeptidase A5##BC053681|CPA5|93979|carboxypeptidase A5##BC042996|CPA5|93979|carboxypeptidase A5##AK131191|CPA5|93979|carboxypeptidase A5##AY155229|CPA5|93979|carboxypeptidase A5##AK290993|CPA4|51200|carboxypeptidase A4##NM_001163446|CPA4|51200|carboxypeptidase A4##NM_016352|CPA4|51200|carboxypeptidase A4##BC052289|CPA4|51200|carboxypeptidase A4##AK310933|CPA4|51200|carboxypeptidase A4##AK298553|CPA4|51200|carboxypeptidase A4##AK298550|CPA4|51200|carboxypeptidase A4##AK299023|CPA4|51200|carboxypeptidase A4##AY358699|CPA4|51200|carboxypeptidase A4##AF095719|CPA4|51200|carboxypeptidase A4##HQ448429|CPA4|51200|carboxypeptidase A4##BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)##AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)##U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)##DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)##BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001868|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK131054|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK291493|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK293366|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC005279|CPA1|1357|carboxypeptidase A1 (pancreatic)##X67318|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ890565|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ893728|CPA1|1357|carboxypeptidase A1 (pancreatic)##BT007313|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC056162|CEP41|95681|centrosomal protein 41kDa##AK314676|CEP41|95681|centrosomal protein 41kDa##BC018789|CEP41|95681|centrosomal protein 41kDa##AK026098|CEP41|95681|centrosomal protein 41kDa##AJ278890|CEP41|95681|centrosomal protein 41kDa##NM_018718|CEP41|95681|centrosomal protein 41kDa##AK298618|CEP41|95681|centrosomal protein 41kDa##AK311382|CEP41|95681|centrosomal protein 41kDa##AF429308|CEP41|95681|centrosomal protein 41kDa##AF429309|CEP41|95681|centrosomal protein 41kDa##AK098397|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_177524|MEST|4232|mesoderm specific transcript homolog (mouse)##CR627364|MEST|4232|mesoderm specific transcript homolog (mouse)##BC090049|MEST|4232|mesoderm specific transcript homolog (mouse)	0.0	
chr11	67981385	67981510	reg1032893.p2	3.691	+	TSC_hg19_v1_chr11_-_67981112 AF264782 BC002522 BC065287 BC087834 NM_016028 NM_017635 BC108304 AK314336 AK299201	-468	-	NM_001277 NM_212469 TSC_hg19_v1_chr11_-_67888859	-92559	-	D10704 BC036471 TSC_hg19_v1_chr11_-_67888844	-92690	-	TSC_hg19_v1_chr11_-_68039418 AF264781	57939	-	TSC_hg19_v1_chr11_-_68039453 NM_022338	58011	-	TSC_hg19_v1_chr11_+_68080058 AB017498 NM_002335 AF077820 AF064548 BC150595 BC098397	98642	+	AF264782|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC002522|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC065287|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC087834|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_016028|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_017635|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##BC108304|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK314336|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##AK299201|SUV420H1|51111|suppressor of variegation 4-20 homolog 1 (Drosophila)##NM_001277|CHKA|1119|choline kinase alpha##NM_212469|CHKA|1119|choline kinase alpha##D10704|CHKA|1119|choline kinase alpha##BC036471|CHKA|1119|choline kinase alpha##AF264781|C11orf24|53838|chromosome 11 open reading frame 24##NM_022338|C11orf24|53838|chromosome 11 open reading frame 24##AB017498|LRP5|4041|low density lipoprotein receptor-related protein 5##NM_002335|LRP5|4041|low density lipoprotein receptor-related protein 5##AF077820|LRP5|4041|low density lipoprotein receptor-related protein 5##AF064548|LRP5|4041|low density lipoprotein receptor-related protein 5##BC150595|LRP5|4041|low density lipoprotein receptor-related protein 5##BC098397|LRP5|4041|low density lipoprotein receptor-related protein 5	0.0	
chr1	228136417	228136483	reg1035263.p1	3.691	+	AB590917 HQ258230 AB060283 AK131041 TSC_hg19_v1_chr1_-_228135634 BC111960 BC113431 NM_003395	-819	-	BC130400 HQ258179 NM_183062	-133069	+	CU676318 TSC_hg19_v1_chr1_+_227923140 BX648570 AK054633 BC011145 BC007786	-213318	+	NM_033131 AK056278 BC103921 BC103922 BC103923 AB060284	58323	+	AK000620 NM_001024226 NM_001658 TSC_hg19_v1_chr1_+_228270371	133921	+	TSC_hg19_v1_chr1_+_228270422 BC011358 AK293553 AK297792 AK057875 AF052179	133960	+	HQ258230|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AB060283|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AK131041|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC111960|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC113431|WNT9A|7483|wingless-type MMTV integration site family, member 9A##NM_003395|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC130400|PRSS38|339501|protease, serine, 38##HQ258179|PRSS38|339501|protease, serine, 38##NM_183062|PRSS38|339501|protease, serine, 38##BX648570|SNAP47|116841|synaptosomal-associated protein, 47kDa##AK054633|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC011145|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC007786|SNAP47|116841|synaptosomal-associated protein, 47kDa##NM_033131|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK056278|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103921|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103922|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103923|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AB060284|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK000620|ARF1|375|ADP-ribosylation factor 1##NM_001024226|ARF1|375|ADP-ribosylation factor 1##NM_001658|ARF1|375|ADP-ribosylation factor 1##BC011358|ARF1|375|ADP-ribosylation factor 1##AK293553|ARF1|375|ADP-ribosylation factor 1##AK297792|ARF1|375|ADP-ribosylation factor 1##AK057875|ARF1|375|ADP-ribosylation factor 1##AF052179|ARF1|375|ADP-ribosylation factor 1	0.0	
chr16	87900439	87900571	reg1040402.p1	3.691	+	TSC_hg19_v1_chr16_-_87799568 BC022969 AK023986 BC011680 NM_001184854 NM_001184856 NM_017566	-100935	-	AB529140 CU674522 CU680010 CU692766 BC001044 TSC_hg19_v1_chr16_-_87799535	-100990	-	TSC_hg19_v1_chr16_+_87636671 DQ893569 DQ894420	-263795	+	AB590343 DQ893338 DQ896766 TSC_hg19_v1_chr16_-_87903112 AB018542 AB017908 AF077866 AB018009 AF104032 BC042600 NM_003486	2570	-	BC137405 BC137411 L19297 NM_001739 TSC_hg19_v1_chr16_-_87970185	69642	-	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	84663	+	BC022969|KLHDC4|54758|kelch domain containing 4##AK023986|KLHDC4|54758|kelch domain containing 4##BC011680|KLHDC4|54758|kelch domain containing 4##NM_001184854|KLHDC4|54758|kelch domain containing 4##NM_001184856|KLHDC4|54758|kelch domain containing 4##NM_017566|KLHDC4|54758|kelch domain containing 4##BC001044|KLHDC4|54758|kelch domain containing 4##DQ893569|JPH3|57338|junctophilin 3##DQ894420|JPH3|57338|junctophilin 3##DQ893338|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##DQ896766|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018542|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB017908|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF077866|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AB018009|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##AF104032|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC042600|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##NM_003486|SLC7A5|8140|solute carrier family 7 (amino acid transporter light chain, L system), member 5##BC137405|CA5A|763|carbonic anhydrase VA, mitochondrial##BC137411|CA5A|763|carbonic anhydrase VA, mitochondrial##L19297|CA5A|763|carbonic anhydrase VA, mitochondrial##NM_001739|CA5A|763|carbonic anhydrase VA, mitochondrial##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein	0.0	
chr18	48721986	48722136	reg1035005.p1	3.691	+	TSC_hg19_v1_chr18_+_48556613 AK290770 BC002379	-165455	+	TSC_hg19_v1_chr18_+_48556582 NM_005359	-165527	+	TSC_hg19_v1_chr18_+_48494409 AK024822 AF308695 AK303027 AK310911 BC014624 AK223507 AB029151	-227640	+	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	1165	-	AY950679 TSC_hg19_v1_chr18_-_48723734	1651	-	TSC_hg19_v1_chr18_-_48724033 NM_016626	1979	-	AK290770|SMAD4|4089|SMAD family member 4##BC002379|SMAD4|4089|SMAD family member 4##NM_005359|SMAD4|4089|SMAD family member 4##AK024822|ELAC1|55520|elaC homolog 1 (E. coli)##AF308695|ELAC1|55520|elaC homolog 1 (E. coli)##AK310911|ELAC1|55520|elaC homolog 1 (E. coli)##BC014624|ELAC1|55520|elaC homolog 1 (E. coli)##AK223507|ELAC1|55520|elaC homolog 1 (E. coli)##AB029151|ELAC1|55520|elaC homolog 1 (E. coli)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)	0.0	
chr19	7214164	7214344	reg1034669.p2	3.691	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-114703	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-144539	+	AK315405 NM_001044387 NM_001044388 NM_024341	-144792	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	79706	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	245753	+	TSC_hg19_v1_chr19_+_7460061 AB011093	245823	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.031192	
chr2	14277906	14278009	reg1035478.p1	3.691	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-1419560	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	-1420041	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-1420704	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	494864	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	494894	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	1423472	-	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence	0.02256	
chr2	173729199	173729283	reg1010053.p2	3.691	+	BC040183 NM_001100397 AK311500 AK311697	-42915	+	TSC_hg19_v1_chr2_+_173600637 AB027471 AK313084 BC024004 AB590290 DQ890549 DQ894011	-128569	+	AB209681 TSC_hg19_v1_chr2_+_173600599 U78516	-128641	+	AB208974 TSC_hg19_v1_chr2_+_173940455	211207	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	211305	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	211407	+	BC040183|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##NM_001100397|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311500|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK311697|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB027471|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AK313084|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##BC024004|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ890549|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##DQ894011|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB209681|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##U78516|RAPGEF4|11069|Rap guanine nucleotide exchange factor (GEF) 4##AB208974|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK	0.961663	
chr2	230207235	230207339	reg1036406.p1	3.691	+	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	-71282	-	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-1160925	-	AK097409 NM_178821 BC036377 AK098821 AK301861	-1470935	+	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	371961	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	579374	-	TSC_hg19_v1_chr2_-_230786712 AK310971	579462	-	AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12	0.943895	CTCF.p2:19:0.944
chr3	31289830	31289929	reg1035694.p1	3.691	+	AL832766 NM_207359	-353727	-	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-641476	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-641857	+	TSC_hg19_v1_chr3_+_31574119 AK311488	284251	+	TSC_hg19_v1_chr3_+_31574468 AK074587	284570	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	284603	+	AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.0	
chr6	108879800	108879874	reg1033054.p1	3.691	+	TSC_hg19_v1_chr6_+_108616194 AF520418 BC018445 NM_145315	-263698	+	TSC_hg19_v1_chr6_-_108582316 NM_003795 NM_152827	-297452	-	TSC_hg19_v1_chr6_-_108582245 BC015179 BC014580 AK289476	-297599	-	TSC_hg19_v1_chr6_+_108881027 NM_201559 BC020227 BC021224	1186	+	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	2238	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	2420	+	AF520418|LACE1|246269|lactation elevated 1##BC018445|LACE1|246269|lactation elevated 1##NM_145315|LACE1|246269|lactation elevated 1##NM_003795|SNX3|8724|sorting nexin 3##NM_152827|SNX3|8724|sorting nexin 3##BC015179|SNX3|8724|sorting nexin 3##BC014580|SNX3|8724|sorting nexin 3##AK289476|SNX3|8724|sorting nexin 3##NM_201559|FOXO3|2309|forkhead box O3##BC020227|FOXO3|2309|forkhead box O3##BC021224|FOXO3|2309|forkhead box O3##BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3	0.0	
chr6	15770929	15771109	reg1018557.p2	3.691	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-107729	-	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	-107842	-	TSC_hg19_v1_chr6_+_15249113 AK303610	-521906	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	358283	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	358418	+	TSC_hg19_v1_chr6_+_16143281 AK026739	372291	+	NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein	0.0	
chr6	17586155	17586290	reg1031913.p1	3.691	+	AK312362 NM_006366 TSC_hg19_v1_chr6_+_17393918 AL832154 AK295600 AK294215 AK293134 AK297538 AK308461 BC008481	-192440	+	AK055391 NM_153020 BC104808 BC104810 BC040928	-303218	+	NM_001143941	-303928	+	TSC_hg19_v1_chr6_+_17600620 NM_016255 AK296393 AK312814 AF097027 BC047881	14377	+	Z25535 AB384675 AK295644 BC052965 NM_005124 TSC_hg19_v1_chr6_-_17707139 AB210024	120680	-	AJ291578 AJ291579 BC127115 BC127116 AY014403 AY014404 TSC_hg19_v1_chr6_-_17987786	401538	-	AK312362|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##NM_006366|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AL832154|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK295600|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK294215|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK293134|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK297538|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK308461|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##BC008481|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK055391|RBM24|221662|RNA binding motif protein 24##NM_153020|RBM24|221662|RNA binding motif protein 24##BC104808|RBM24|221662|RNA binding motif protein 24##BC104810|RBM24|221662|RNA binding motif protein 24##BC040928|RBM24|221662|RNA binding motif protein 24##NM_001143941|RBM24|221662|RNA binding motif protein 24##NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1##AK296393|FAM8A1|51439|family with sequence similarity 8, member A1##AK312814|FAM8A1|51439|family with sequence similarity 8, member A1##AF097027|FAM8A1|51439|family with sequence similarity 8, member A1##BC047881|FAM8A1|51439|family with sequence similarity 8, member A1##Z25535|NUP153|9972|nucleoporin 153kDa##AK295644|NUP153|9972|nucleoporin 153kDa##BC052965|NUP153|9972|nucleoporin 153kDa##NM_005124|NUP153|9972|nucleoporin 153kDa##AB210024|NUP153|9972|nucleoporin 153kDa##AJ291578|KIF13A|63971|kinesin family member 13A##AJ291579|KIF13A|63971|kinesin family member 13A##BC127115|KIF13A|63971|kinesin family member 13A##BC127116|KIF13A|63971|kinesin family member 13A##AY014403|KIF13A|63971|kinesin family member 13A##AY014404|KIF13A|63971|kinesin family member 13A	0.390655	CTCF.p2:-40:0.380
chr6	42391118	42391245	reg1037246.p1	3.691	+	TSC_hg19_v1_chr6_-_42185603 NM_018141	-205564	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-205581	-	TSC_hg19_v1_chr6_-_42185597 AK316599 BC012560	-205584	-	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	28642	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	140569	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	140596	+	NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##AK316599|MRPS10|55173|mitochondrial ribosomal protein S10##BC012560|MRPS10|55173|mitochondrial ribosomal protein S10##AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.0	
chr8	8227955	8228033	reg1038321.p1	3.691	+	TSC_hg19_v1_chr8_-_8175862 AF075060	-52106	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-141852	+	AK292586 NM_001193630	-444136	+	AK122582 NM_001080826	11228	-	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	331704	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	522944	-	AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1	0.0	
chr10	3848511	3848595	reg1031660.p2	3.690	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-21044	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-21242	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-633548	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1019865	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1156961	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1157070	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr1	100598676	100598762	reg1043420.p1	3.690	+	NM_019083 AK295828 BC075811 BC057226 AK002081 AK289404 AK001149 AK294738 AK298941 AB527509	-5	+	BX648406 BC101026 BX641109 AK302513 AY359522 BC054889 NM_194292 AK307824	-258	-	TSC_hg19_v1_chr1_+_100503661 AF427492 NM_033055	-94998	+	BC009613 NM_144620 AK096892 AL833417 BC022420 AY358131	45066	-	J03208 M19301 M27093 BC016675 BC030002 BT007372 TSC_hg19_v1_chr1_-_100715382	116660	-	AK303941 AK313191 TSC_hg19_v1_chr1_-_100715394 X66785 NM_001918	116680	-	NM_019083|CCDC76|54482|coiled-coil domain containing 76##AK295828|CCDC76|54482|coiled-coil domain containing 76##BC075811|CCDC76|54482|coiled-coil domain containing 76##BC057226|CCDC76|54482|coiled-coil domain containing 76##AK002081|CCDC76|54482|coiled-coil domain containing 76##AK289404|CCDC76|54482|coiled-coil domain containing 76##AK001149|CCDC76|54482|coiled-coil domain containing 76##AK294738|CCDC76|54482|coiled-coil domain containing 76##AK298941|CCDC76|54482|coiled-coil domain containing 76##BX648406|SASS6|163786|spindle assembly 6 homolog (C. elegans)##BC101026|SASS6|163786|spindle assembly 6 homolog (C. elegans)##BX641109|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AK302513|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AY359522|SASS6|163786|spindle assembly 6 homolog (C. elegans)##BC054889|SASS6|163786|spindle assembly 6 homolog (C. elegans)##NM_194292|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AK307824|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AF427492|HIAT1|64645|hippocampus abundant transcript 1##NM_033055|HIAT1|64645|hippocampus abundant transcript 1##BC009613|LRRC39|127495|leucine rich repeat containing 39##NM_144620|LRRC39|127495|leucine rich repeat containing 39##AK096892|LRRC39|127495|leucine rich repeat containing 39##AL833417|LRRC39|127495|leucine rich repeat containing 39##BC022420|LRRC39|127495|leucine rich repeat containing 39##AY358131|LRRC39|127495|leucine rich repeat containing 39##J03208|DBT|1629|dihydrolipoamide branched chain transacylase E2##M19301|DBT|1629|dihydrolipoamide branched chain transacylase E2##M27093|DBT|1629|dihydrolipoamide branched chain transacylase E2##BC016675|DBT|1629|dihydrolipoamide branched chain transacylase E2##BC030002|DBT|1629|dihydrolipoamide branched chain transacylase E2##BT007372|DBT|1629|dihydrolipoamide branched chain transacylase E2##AK303941|DBT|1629|dihydrolipoamide branched chain transacylase E2##AK313191|DBT|1629|dihydrolipoamide branched chain transacylase E2##X66785|DBT|1629|dihydrolipoamide branched chain transacylase E2##NM_001918|DBT|1629|dihydrolipoamide branched chain transacylase E2	0.059448	
chr1	234977540	234977721	reg1029338.p1	3.690	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-81856	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-232384	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-233772	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	314459	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	314601	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	346933	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr12	49328266	49328360	reg1034496.p2	3.690	+	DQ892057 DQ895251 AF238079 BC027973 AY358998 BC048292 AK301455 TSC_hg19_v1_chr12_-_49319304 NM_001143782 NM_016594	-9043	-	NM_001143781	-9650	-	NM_033124 AK302082 AK093051 AX747886 AF382188 AK314623 BC039317	-30391	+	BC017565 TSC_hg19_v1_chr12_-_49351236 BC007647 BC007762	22869	-	AK303726 AK309899 TSC_hg19_v1_chr12_-_49351242 AK316528	22929	-	TSC_hg19_v1_chr12_-_49351248 AK291633 AK315970 BC028402	22934	-	DQ892057|FKBP11|51303|FK506 binding protein 11, 19 kDa##DQ895251|FKBP11|51303|FK506 binding protein 11, 19 kDa##AF238079|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC027973|FKBP11|51303|FK506 binding protein 11, 19 kDa##AY358998|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC048292|FKBP11|51303|FK506 binding protein 11, 19 kDa##AK301455|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_001143782|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_016594|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_001143781|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_033124|CCDC65|85478|coiled-coil domain containing 65##AK302082|CCDC65|85478|coiled-coil domain containing 65##AK093051|CCDC65|85478|coiled-coil domain containing 65##AF382188|CCDC65|85478|coiled-coil domain containing 65##AK314623|CCDC65|85478|coiled-coil domain containing 65##BC039317|CCDC65|85478|coiled-coil domain containing 65##BC017565|ARF3|377|ADP-ribosylation factor 3##BC007647|ARF3|377|ADP-ribosylation factor 3##BC007762|ARF3|377|ADP-ribosylation factor 3##AK303726|ARF3|377|ADP-ribosylation factor 3##AK316528|ARF3|377|ADP-ribosylation factor 3##AK291633|ARF3|377|ADP-ribosylation factor 3##BC028402|ARF3|377|ADP-ribosylation factor 3	0.941017	CTCF.p2:-1:0.941
chr1	2493505	2493578	reg1032566.p1	3.690	+	AK300515 NM_003820 U70321 AK303468 BC029848 BC002794 BC018882 U81232 AF153978 AK310076 AB208808 AY358879 CU678202 AB590572 DQ893000 DQ896755 AF373877 AF373878 CR456909	-5588	+	BC087840 DQ272660 NM_001010926	-31858	-	TSC_hg19_v1_chr1_-_2458040 AL442072 BC043496 AK001644 AK223546 AK303127 AK309860 NM_018216 AK295301	-35477	-	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	24647	+	TSC_hg19_v1_chr1_+_2518534 AK094901	24973	+	AK093058 AX747891 NM_033467 TSC_hg19_v1_chr1_-_2564497	70924	-	AK300515|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##NM_003820|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U70321|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK303468|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC029848|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC002794|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC018882|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##U81232|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF153978|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AK310076|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AB208808|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AY358879|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ893000|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##DQ896755|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373877|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##AF373878|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##CR456909|TNFRSF14|8764|tumor necrosis factor receptor superfamily, member 14##BC087840|HES5|388585|hairy and enhancer of split 5 (Drosophila)##DQ272660|HES5|388585|hairy and enhancer of split 5 (Drosophila)##NM_001010926|HES5|388585|hairy and enhancer of split 5 (Drosophila)##AL442072|PANK4|55229|pantothenate kinase 4##BC043496|PANK4|55229|pantothenate kinase 4##AK001644|PANK4|55229|pantothenate kinase 4##AK223546|PANK4|55229|pantothenate kinase 4##AK303127|PANK4|55229|pantothenate kinase 4##AK309860|PANK4|55229|pantothenate kinase 4##NM_018216|PANK4|55229|pantothenate kinase 4##AK295301|PANK4|55229|pantothenate kinase 4##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B##AK094901|FAM213B|127281|family with sequence similarity 213, member B##AK093058|MMEL1|79258|membrane metallo-endopeptidase-like 1##NM_033467|MMEL1|79258|membrane metallo-endopeptidase-like 1	0.0	
chr13	114757533	114757665	reg1039221.p1	3.690	+	TSC_hg19_v1_chr13_-_114567041 NM_000820	-190556	-	TSC_hg19_v1_chr13_-_114567037 BC030708	-190563	-	TSC_hg19_v1_chr13_-_114567011 BC038984 L13720	-190578	-	AB385165 TSC_hg19_v1_chr13_-_114898005 AK289746 X89399	140387	-	TSC_hg19_v1_chr13_-_114898028 AK295861 AK313795	140426	-	TSC_hg19_v1_chr13_-_114898058 AK128094	140467	-	NM_000820|GAS6|2621|growth arrest-specific 6##BC030708|GAS6|2621|growth arrest-specific 6##BC038984|GAS6|2621|growth arrest-specific 6##L13720|GAS6|2621|growth arrest-specific 6##AK289746|RASA3|22821|RAS p21 protein activator 3##X89399|RASA3|22821|RAS p21 protein activator 3##AK295861|RASA3|22821|RAS p21 protein activator 3##AK313795|RASA3|22821|RAS p21 protein activator 3##AK128094|RASA3|22821|RAS p21 protein activator 3	0.0	
chr16	20886326	20886406	reg1036910.p2	3.690	+	TSC_hg19_v1_chr16_+_20818060 AK314458 BC068503	-68322	+	NM_001144924 NM_001199053 NM_030941 TSC_hg19_v1_chr16_+_20817848 BC007646 AF332193 AL136763	-68550	+	AK292594 TSC_hg19_v1_chr16_-_20817795 AK304347 BC010503 NM_001142725 NM_080663 AK127391	-68581	-	AK308690 NM_020424	25190	+	BX648998 NM_173475 TSC_hg19_v1_chr16_-_20911681 BC040442 BX648185	25284	-	AK311415 NM_001128301 NM_001128302 TSC_hg19_v1_chr16_+_20912121 AK311881	25755	+	AK314458|LOC81691|81691|exonuclease NEF-sp##BC068503|LOC81691|81691|exonuclease NEF-sp##NM_001144924|LOC81691|81691|exonuclease NEF-sp##NM_001199053|LOC81691|81691|exonuclease NEF-sp##NM_030941|LOC81691|81691|exonuclease NEF-sp##BC007646|LOC81691|81691|exonuclease NEF-sp##AF332193|LOC81691|81691|exonuclease NEF-sp##AL136763|LOC81691|81691|exonuclease NEF-sp##AK292594|ERI2|112479|ERI1 exoribonuclease family member 2##AK304347|ERI2|112479|ERI1 exoribonuclease family member 2##BC010503|ERI2|112479|ERI1 exoribonuclease family member 2##NM_001142725|ERI2|112479|ERI1 exoribonuclease family member 2##NM_080663|ERI2|112479|ERI1 exoribonuclease family member 2##AK127391|ERI2|112479|ERI1 exoribonuclease family member 2##AK308690|LYRM1|57149|LYR motif containing 1##NM_020424|LYRM1|57149|LYR motif containing 1##BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##AK311415|LYRM1|57149|LYR motif containing 1##NM_001128301|LYRM1|57149|LYR motif containing 1##NM_001128302|LYRM1|57149|LYR motif containing 1##AK311881|LYRM1|57149|LYR motif containing 1	0.98336	CTCF.p2:-9:0.983
chr16	89428725	89428856	reg1035878.p1	3.690	+	AK293862 NM_001242885	-41250	+	BC041585 TSC_hg19_v1_chr16_-_89351073	-77834	-	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	-78716	-	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	128141	-	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	146024	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	198275	+	AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC041585|ANKRD11|29123|ankyrin repeat domain 11##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13	0.0	
chr17	15074903	15074999	reg1035974.p1	3.690	+	TSC_hg19_v1_chr17_+_14204397 AK023723 BC063301 AF105377 NM_006041 BC069664 BC069725	-870506	+	NM_001007530 BC146859 BC071823	-934788	-	TSC_hg19_v1_chr17_+_13972841 BC000060 BC006394 U09466 AK294213 AK295925 BT006985 CU674016 DQ893604 DQ895073	-1102070	+	CR541931 CR541953 M94048 NM_153322 S61788 TSC_hg19_v1_chr17_-_15164113	89129	-	AK300690 L03203 TSC_hg19_v1_chr17_-_15165834	90868	-	AK290640 TSC_hg19_v1_chr17_-_15165870 BC019040	90914	-	AK023723|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC063301|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##AF105377|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##NM_006041|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC069664|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC069725|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##NM_001007530|CDRT15|146822|CMT1A duplicated region transcript 15##BC146859|CDRT15|146822|CMT1A duplicated region transcript 15##BC071823|CDRT15|146822|CMT1A duplicated region transcript 15##BC000060|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##BC006394|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##U09466|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK294213|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK295925|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##BT006985|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##DQ893604|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##DQ895073|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##CR541931|PMP22|5376|peripheral myelin protein 22##CR541953|PMP22|5376|peripheral myelin protein 22##M94048|PMP22|5376|peripheral myelin protein 22##NM_153322|PMP22|5376|peripheral myelin protein 22##S61788|PMP22|5376|peripheral myelin protein 22##AK300690|PMP22|5376|peripheral myelin protein 22##L03203|PMP22|5376|peripheral myelin protein 22##AK290640|PMP22|5376|peripheral myelin protein 22##BC019040|PMP22|5376|peripheral myelin protein 22	0.069142	
chr17	40313598	40313700	reg1033296.p1	3.690	+	TSC_hg19_v1_chr17_-_40307015 BC114439 BC106039 NM_001252039 NM_004583 NM_201434	-6611	-	TSC_hg19_v1_chr17_-_40307008 AK310234	-6651	-	TSC_hg19_v1_chr17_-_40306986 U18420	-6688	-	TSC_hg19_v1_chr17_-_40333301 AB022698 NM_012285	19626	-	AB463761 AF041240 NM_001524	23777	-	AK298933 TSC_hg19_v1_chr17_-_40346487 BC022784 AK122777 AK123075 AK307058 BC011056 AK075277 NM_001142622 NM_001142623 NM_032484	32839	-	BC114439|RAB5C|5878|RAB5C, member RAS oncogene family##BC106039|RAB5C|5878|RAB5C, member RAS oncogene family##NM_001252039|RAB5C|5878|RAB5C, member RAS oncogene family##NM_004583|RAB5C|5878|RAB5C, member RAS oncogene family##NM_201434|RAB5C|5878|RAB5C, member RAS oncogene family##AK310234|RAB5C|5878|RAB5C, member RAS oncogene family##U18420|RAB5C|5878|RAB5C, member RAS oncogene family##AB022698|KCNH4|23415|potassium voltage-gated channel, subfamily H (eag-related), member 4##NM_012285|KCNH4|23415|potassium voltage-gated channel, subfamily H (eag-related), member 4##AF041240|HCRT|3060|hypocretin (orexin) neuropeptide precursor##NM_001524|HCRT|3060|hypocretin (orexin) neuropeptide precursor##AK298933|GHDC|84514|GH3 domain containing##BC022784|GHDC|84514|GH3 domain containing##AK122777|GHDC|84514|GH3 domain containing##AK123075|GHDC|84514|GH3 domain containing##AK307058|GHDC|84514|GH3 domain containing##BC011056|GHDC|84514|GH3 domain containing##AK075277|GHDC|84514|GH3 domain containing##NM_001142622|GHDC|84514|GH3 domain containing##NM_001142623|GHDC|84514|GH3 domain containing##NM_032484|GHDC|84514|GH3 domain containing	0.0	
chr17	70314085	70314231	reg1029231.p2	3.690	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-196918	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-196988	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-196999	+	AK000477 TSC_hg19_v1_chr17_-_70588944	274785	-	AF331643 TSC_hg19_v1_chr17_-_71088816	774658	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	774665	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr19	14414339	14414459	reg1033057.p1	3.690	+	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	-97351	-	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	-153599	-	TSC_hg19_v1_chr19_+_14247979 BX537706	-166408	+	TSC_hg19_v1_chr19_+_14491970 NM_001025160 NM_001784 NM_078481 AK292159 AK308368	77650	+	TSC_hg19_v1_chr19_+_14492255 AX775807 AX775809 AK225655 AK097264 AK225677 AK300343 AK304553 AK314697 X84700 BC026690 AX775813 U76764	77856	+	TSC_hg19_v1_chr19_-_14529877 AK301847	115490	-	AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##NM_001025160|CD97|976|CD97 molecule##NM_001784|CD97|976|CD97 molecule##NM_078481|CD97|976|CD97 molecule##AK292159|CD97|976|CD97 molecule##AK308368|CD97|976|CD97 molecule##AX775807|CD97|976|CD97 molecule##AX775809|CD97|976|CD97 molecule##AK225655|CD97|976|CD97 molecule##AK097264|CD97|976|CD97 molecule##AK225677|CD97|976|CD97 molecule##AK300343|CD97|976|CD97 molecule##AK304553|CD97|976|CD97 molecule##AK314697|CD97|976|CD97 molecule##X84700|CD97|976|CD97 molecule##BC026690|CD97|976|CD97 molecule##AX775813|CD97|976|CD97 molecule##U76764|CD97|976|CD97 molecule##AK301847|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A	0.0	
chr2	219875034	219875136	reg1044109.p1	3.690	+	AF166331 NM_005209 BC006285 NM_057093 NM_057094	-16962	-	BC023511 NM_017521 Y08976	-24760	-	TSC_hg19_v1_chr2_+_219824381 BC041771 NM_003936 U34051	-50676	+	AK127189 AK302678 AK302688 BC031585 NM_152389 NM_194302 BC047637	31157	-	BC136587 BC136588 NM_002181	50152	-	TSC_hg19_v1_chr2_-_220025558 BC012732 AK022672 AJ972687 BC030986 NM_024782	150454	-	AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2##BC023511|FEV|54738|FEV (ETS oncogene family)##NM_017521|FEV|54738|FEV (ETS oncogene family)##Y08976|FEV|54738|FEV (ETS oncogene family)##BC041771|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##NM_003936|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##U34051|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##AK127189|CCDC108|255101|coiled-coil domain containing 108##AK302678|CCDC108|255101|coiled-coil domain containing 108##AK302688|CCDC108|255101|coiled-coil domain containing 108##BC031585|CCDC108|255101|coiled-coil domain containing 108##NM_152389|CCDC108|255101|coiled-coil domain containing 108##NM_194302|CCDC108|255101|coiled-coil domain containing 108##BC047637|CCDC108|255101|coiled-coil domain containing 108##BC136587|IHH|3549|Indian hedgehog##BC136588|IHH|3549|Indian hedgehog##NM_002181|IHH|3549|Indian hedgehog##BC012732|NHEJ1|79840|nonhomologous end-joining factor 1##AK022672|NHEJ1|79840|nonhomologous end-joining factor 1##AJ972687|NHEJ1|79840|nonhomologous end-joining factor 1##BC030986|NHEJ1|79840|nonhomologous end-joining factor 1##NM_024782|NHEJ1|79840|nonhomologous end-joining factor 1	0.806378	CTCF.p2:-18:0.806
chr2	43452975	43453155	reg1027787.p1	3.690	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-433314	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-461765	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-657168	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	280	-	TSC_hg19_v1_chr2_-_43453736 BC020369	665	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	677	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.0	
chr4	11101355	11101440	reg1015930.p1	3.690	+	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-414996	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-642387	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-982861	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	329135	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2384554	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2384578	-	BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr4	6021496	6021619	reg1044027.p1	3.690	+	DQ206871 TSC_hg19_v1_chr4_-_5894794 NM_001014809	-126813	-	BC009987 TSC_hg19_v1_chr4_-_5891940	-129629	-	TSC_hg19_v1_chr4_-_5890302 NM_001313	-131248	-	TSC_hg19_v1_chr4_-_6202277 AK294356 AK307983 AK056126 AM412307 AM412308 AM412309 AM412310 BC026343 NM_001099433 NM_144720	180727	-	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	250011	+	Y18064 TSC_hg19_v1_chr4_+_6271588	250037	+	DQ206871|CRMP1|1400|collapsin response mediator protein 1##NM_001014809|CRMP1|1400|collapsin response mediator protein 1##BC009987|CRMP1|1400|collapsin response mediator protein 1##NM_001313|CRMP1|1400|collapsin response mediator protein 1##AK294356|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK307983|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK056126|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412307|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412308|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412309|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412310|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##BC026343|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_001099433|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_144720|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)	0.0	
chr5	169720428	169720543	reg1040988.p1	3.690	+	BC030767 NM_001102609 BC092511	-60489	+	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	-187514	+	AK055998 NM_001129891	-312742	-	BT007273 FN432830 DQ890681 DQ893863 AB527802 TSC_hg19_v1_chr5_-_169724688	4166	-	TSC_hg19_v1_chr5_-_169724734 BC016618 AK310369	4270	-	AK292890 TSC_hg19_v1_chr5_-_169724784 AK300000	4313	-	BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##BT007273|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##FN432830|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ890681|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ893863|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK292890|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK300000|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)	0.068296	
chr8	21669857	21669974	reg1038450.p2	3.690	+	TSC_hg19_v1_chr8_-_21646372 BC041688 NM_001165038 NM_001165039 NM_001495	-23549	-	AY326396 AY941828 U93703 AB529071 CU692022 AF002700 BC033096 TSC_hg19_v1_chr8_-_21645836 AK299623 U97145	-24123	-	AF123652 AF123654 AF123655 AF123656 AF123657 AF123658 EU446940 BC075006 BC075007 AF123659 NM_021020	-1557169	-	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	101250	-	TSC_hg19_v1_chr8_+_21777194 NM_015024 BC030785	107274	+	TSC_hg19_v1_chr8_+_21777257 AK291472 AB018288 AF064729 CU689010	107333	+	BC041688|GFRA2|2675|GDNF family receptor alpha 2##NM_001165038|GFRA2|2675|GDNF family receptor alpha 2##NM_001165039|GFRA2|2675|GDNF family receptor alpha 2##NM_001495|GFRA2|2675|GDNF family receptor alpha 2##AY326396|GFRA2|2675|GDNF family receptor alpha 2##AY941828|GFRA2|2675|GDNF family receptor alpha 2##U93703|GFRA2|2675|GDNF family receptor alpha 2##AF002700|GFRA2|2675|GDNF family receptor alpha 2##AK299623|GFRA2|2675|GDNF family receptor alpha 2##U97145|GFRA2|2675|GDNF family receptor alpha 2##AF123652|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123654|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123655|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123656|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123657|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123658|LZTS1|11178|leucine zipper, putative tumor suppressor 1##EU446940|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075006|LZTS1|11178|leucine zipper, putative tumor suppressor 1##BC075007|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF123659|LZTS1|11178|leucine zipper, putative tumor suppressor 1##NM_021020|LZTS1|11178|leucine zipper, putative tumor suppressor 1##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa##NM_015024|XPO7|23039|exportin 7##BC030785|XPO7|23039|exportin 7##AK291472|XPO7|23039|exportin 7##AB018288|XPO7|23039|exportin 7##AF064729|XPO7|23039|exportin 7	0.715775	CTCF.p2:-4:0.716
chr8	8353714	8353895	reg1038445.p1	3.690	+	AK122582 NM_001080826	-114582	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-177916	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-267662	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	205894	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	397134	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	506561	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.0	
chrX	86061955	86062065	reg1035105.p1	3.690	+	AK055953 AK298787 NM_001139515	-544040	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	-658545	+	TSC_hg19_v1_chrX_+_85403454 AK290596 NM_001139514 NM_053281	-658558	+	NM_019117 NM_057162 AK056457 AB051474 BC161675 AL832514 AF284765 AF284766 BC140839 BC140840 BC142652 BC146677 AB385497	710795	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	1940230	+	BC117398 BC117400 NM_138960 BC101144 BC101145 AF497480 BC029920 AB464725 HQ258115	3115001	+	AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)##AK290596|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139514|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_053281|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)##NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)##AK056457|KLHL4|56062|kelch-like 4 (Drosophila)##AB051474|KLHL4|56062|kelch-like 4 (Drosophila)##BC161675|KLHL4|56062|kelch-like 4 (Drosophila)##AL832514|KLHL4|56062|kelch-like 4 (Drosophila)##AF284765|KLHL4|56062|kelch-like 4 (Drosophila)##AF284766|KLHL4|56062|kelch-like 4 (Drosophila)##BC140839|KLHL4|56062|kelch-like 4 (Drosophila)##BC140840|KLHL4|56062|kelch-like 4 (Drosophila)##BC142652|KLHL4|56062|kelch-like 4 (Drosophila)##BC146677|KLHL4|56062|kelch-like 4 (Drosophila)##NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1##BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked	0.977763	CTCF.p2:-21:0.978
chr10	24683712	24683795	reg1038147.p2	3.689	+	TSC_hg19_v1_chr10_+_24498095 AL833280 BC136521 BC144227	-185659	+	AK091142 AX746804 NM_001098501 NM_019590 TSC_hg19_v1_chr10_+_24497850	-185965	+	AB033043 NM_001098500 TSC_hg19_v1_chr10_+_23983680	-700076	+	TSC_hg19_v1_chr10_+_24755441 AK300422	71691	+	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	71716	+	AK307604 TSC_hg19_v1_chr10_-_25012174	328420	-	AL833280|KIAA1217|56243|KIAA1217##BC136521|KIAA1217|56243|KIAA1217##BC144227|KIAA1217|56243|KIAA1217##AK091142|KIAA1217|56243|KIAA1217##NM_001098501|KIAA1217|56243|KIAA1217##NM_019590|KIAA1217|56243|KIAA1217##AB033043|KIAA1217|56243|KIAA1217##NM_001098500|KIAA1217|56243|KIAA1217##AK300422|KIAA1217|56243|KIAA1217##BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21	0.078552	
chr11	45954843	45954909	reg1032245.p1	3.689	+	TSC_hg19_v1_chr11_+_45944226 BC037291	-10660	+	AK055829 AK096021 NM_152312	-11693	+	TSC_hg19_v1_chr11_-_45939595 AF118240 NM_004813 NM_057174	-15256	-	TSC_hg19_v1_chr11_-_46142986 AK023258 NM_001101802 NM_016621	188121	-	TSC_hg19_v1_chr11_+_46299212 AK314072 NM_052854	344329	+	BC014097 TSC_hg19_v1_chr11_+_46299557 BC015781 AB063321	344684	+	BC037291|GYLTL1B|120071|glycosyltransferase-like 1B##AK055829|GYLTL1B|120071|glycosyltransferase-like 1B##AK096021|GYLTL1B|120071|glycosyltransferase-like 1B##NM_152312|GYLTL1B|120071|glycosyltransferase-like 1B##AF118240|PEX16|9409|peroxisomal biogenesis factor 16##NM_004813|PEX16|9409|peroxisomal biogenesis factor 16##NM_057174|PEX16|9409|peroxisomal biogenesis factor 16##AK023258|PHF21A|51317|PHD finger protein 21A##NM_001101802|PHF21A|51317|PHD finger protein 21A##NM_016621|PHF21A|51317|PHD finger protein 21A##AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	0.0	
chr11	75040077	75040257	reg1002154.p2	3.689	+	NM_001195528	-88218	+	FM209054 FM209053 AF205073 NM_001145211 AK294503	-169326	+	NM_001145212 NM_007256 FM209050 TSC_hg19_v1_chr11_+_74862151 AK304783 AK302492 AK290234 AK300134 AB020687 BC127254 BC041095 AB026256 AL117465	-178023	+	AF084040 AF084940 FJ348262 CU678548 AB462955 TSC_hg19_v1_chr11_-_75062708 AK289718 BC003636 NM_004041 NM_020251	22649	-	TSC_hg19_v1_chr11_+_75110562 D28344 AK130960 BC034149 NM_001005 AK129794 AK313051 BC013231 BC100284 X55715 BC071917 AK223048 BC003137 BC071669 S42658 AB464166 CU678394 DQ892888 DQ896136 U14990 U14991 U14992 BC003577 BC013196 AB062288	70408	+	HQ258227 BC132708 BC132710 TSC_hg19_v1_chr11_-_75141083 AK091109 AX746783	100893	-	NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050##FM209053|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF205073|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145211|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK294503|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_001145212|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##NM_007256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##FM209050|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK304783|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK302492|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK290234|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AK300134|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB020687|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC127254|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##BC041095|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AB026256|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AL117465|SLCO2B1|11309|solute carrier organic anion transporter family, member 2B1##AF084040|ARRB1|408|arrestin, beta 1##AF084940|ARRB1|408|arrestin, beta 1##FJ348262|ARRB1|408|arrestin, beta 1##AK289718|ARRB1|408|arrestin, beta 1##BC003636|ARRB1|408|arrestin, beta 1##NM_004041|ARRB1|408|arrestin, beta 1##NM_020251|ARRB1|408|arrestin, beta 1##D28344|RPS3|6188|ribosomal protein S3##AK130960|RPS3|6188|ribosomal protein S3##BC034149|RPS3|6188|ribosomal protein S3##NM_001005|RPS3|6188|ribosomal protein S3##AK129794|RPS3|6188|ribosomal protein S3##AK313051|RPS3|6188|ribosomal protein S3##BC013231|RPS3|6188|ribosomal protein S3##BC100284|RPS3|6188|ribosomal protein S3##X55715|RPS3|6188|ribosomal protein S3##BC071917|RPS3|6188|ribosomal protein S3##AK223048|RPS3|6188|ribosomal protein S3##BC003137|RPS3|6188|ribosomal protein S3##BC071669|RPS3|6188|ribosomal protein S3##S42658|RPS3|6188|ribosomal protein S3##DQ892888|RPS3|6188|ribosomal protein S3##DQ896136|RPS3|6188|ribosomal protein S3##U14990|RPS3|6188|ribosomal protein S3##U14991|RPS3|6188|ribosomal protein S3##U14992|RPS3|6188|ribosomal protein S3##BC003577|RPS3|6188|ribosomal protein S3##BC013196|RPS3|6188|ribosomal protein S3##AB062288|RPS3|6188|ribosomal protein S3##HQ258227|KLHL35|283212|kelch-like 35 (Drosophila)##BC132708|KLHL35|283212|kelch-like 35 (Drosophila)##BC132710|KLHL35|283212|kelch-like 35 (Drosophila)##AK091109|KLHL35|283212|kelch-like 35 (Drosophila)	0.0	
chr12	109250399	109250532	reg1040425.p1	3.689	+	AK095421 NM_001161331	-29139	-	TSC_hg19_v1_chr12_-_109125295 AK023205 AK223073 AK304839 AK311315 AK316065 AB030656 NM_014325	-125173	-	TSC_hg19_v1_chr12_-_109125284 BC002342 AB209909	-125185	-	AB072355 AB072356 TSC_hg19_v1_chr12_-_109251307	825	-	TSC_hg19_v1_chr12_-_109251360 BC062341 NM_001161330 NM_018984	957	-	NM_001917 AX741655 AX741656 AX741658 AX776478 AX776479 AX786386 AK312995 BX538210 BC029057 BC074770	23455	+	AK095421|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161331|SSH1|54434|slingshot homolog 1 (Drosophila)##AK023205|CORO1C|23603|coronin, actin binding protein, 1C##AK223073|CORO1C|23603|coronin, actin binding protein, 1C##AK304839|CORO1C|23603|coronin, actin binding protein, 1C##AK311315|CORO1C|23603|coronin, actin binding protein, 1C##AK316065|CORO1C|23603|coronin, actin binding protein, 1C##AB030656|CORO1C|23603|coronin, actin binding protein, 1C##NM_014325|CORO1C|23603|coronin, actin binding protein, 1C##BC002342|CORO1C|23603|coronin, actin binding protein, 1C##AB209909|CORO1C|23603|coronin, actin binding protein, 1C##AB072355|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072356|SSH1|54434|slingshot homolog 1 (Drosophila)##BC062341|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161330|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_018984|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001917|DAO|1610|D-amino-acid oxidase##AX741655|DAO|1610|D-amino-acid oxidase##AX741656|DAO|1610|D-amino-acid oxidase##AX741658|DAO|1610|D-amino-acid oxidase##AX776478|DAO|1610|D-amino-acid oxidase##AX776479|DAO|1610|D-amino-acid oxidase##AX786386|DAO|1610|D-amino-acid oxidase##AK312995|DAO|1610|D-amino-acid oxidase##BX538210|DAO|1610|D-amino-acid oxidase##BC029057|DAO|1610|D-amino-acid oxidase##BC074770|DAO|1610|D-amino-acid oxidase	0.0	
chr15	66209556	66209736	reg1016317.p2	3.689	+	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	-47799	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-125053	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	-125173	-	TSC_hg19_v1_chr15_-_66321664 AK054827	112047	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	336431	-	NM_133375 AK295392 BC022089	375999	+	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	0.0	
chr1	6469265	6469361	reg1039386.p1	3.689	+	BC017365 AK057168 NM_007274	-15514	-	BT006888 TSC_hg19_v1_chr1_-_6453439 AB074415 AB074416 D88894 AK289572 AK300831	-15902	-	AK290097 AB074417 NM_181864	-23504	-	AB463714 BC132698 BC136963 BC142687 TSC_hg19_v1_chr1_-_6479976 AK091122 NM_019089	10617	-	TSC_hg19_v1_chr1_+_6484835 AL136880 NM_031475	15518	+	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	56889	-	BC017365|ACOT7|11332|acyl-CoA thioesterase 7##AK057168|ACOT7|11332|acyl-CoA thioesterase 7##NM_007274|ACOT7|11332|acyl-CoA thioesterase 7##BT006888|ACOT7|11332|acyl-CoA thioesterase 7##AB074415|ACOT7|11332|acyl-CoA thioesterase 7##AB074416|ACOT7|11332|acyl-CoA thioesterase 7##D88894|ACOT7|11332|acyl-CoA thioesterase 7##AK289572|ACOT7|11332|acyl-CoA thioesterase 7##AK300831|ACOT7|11332|acyl-CoA thioesterase 7##AK290097|ACOT7|11332|acyl-CoA thioesterase 7##AB074417|ACOT7|11332|acyl-CoA thioesterase 7##NM_181864|ACOT7|11332|acyl-CoA thioesterase 7##BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)##NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AL136880|ESPN|83715|espin##NM_031475|ESPN|83715|espin##U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25	0.01552	
chr17	1109784	1109895	reg1034369.p2	3.689	+	TSC_hg19_v1_chr17_-_1090565 AK126882 AK124547 NM_001159746	-19251	-	AK302682 AB384846 TSC_hg19_v1_chr17_-_1083048 NM_021962 U01147	-26770	-	TSC_hg19_v1_chr17_-_1029059 AK307827	-80765	-	NM_001164405	64018	+	AB090231 NM_172367 BC142615	73125	+	TSC_hg19_v1_chr17_-_1248347 L13388	138517	-	AK126882|ABR|29|active BCR-related gene##AK124547|ABR|29|active BCR-related gene##NM_001159746|ABR|29|active BCR-related gene##AK302682|ABR|29|active BCR-related gene##NM_021962|ABR|29|active BCR-related gene##U01147|ABR|29|active BCR-related gene##AK307827|ABR|29|active BCR-related gene##NM_001164405|BHLHA9|727857|basic helix-loop-helix family, member a9##AB090231|TUSC5|286753|tumor suppressor candidate 5##NM_172367|TUSC5|286753|tumor suppressor candidate 5##BC142615|TUSC5|286753|tumor suppressor candidate 5##L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	0.0	
chr19	51228379	51228479	reg1022849.p2	3.689	+	TSC_hg19_v1_chr19_+_51226662 AY870345 AB009244 AB528595 BT019673 CU675163	-1707	+	TSC_hg19_v1_chr19_+_51226653 BC005810 D86586	-1781	+	TSC_hg19_v1_chr19_+_51226620 AF020044 NM_002975 AK314141	-1816	+	BC095544 BC067453 BC067454 NM_001506	45359	+	AB463389 NM_033068	65242	+	TSC_hg19_v1_chr19_-_51307892 NM_199250 NM_199249	79490	-	AY870345|CLEC11A|6320|C-type lectin domain family 11, member A##AB009244|CLEC11A|6320|C-type lectin domain family 11, member A##BT019673|CLEC11A|6320|C-type lectin domain family 11, member A##BC005810|CLEC11A|6320|C-type lectin domain family 11, member A##D86586|CLEC11A|6320|C-type lectin domain family 11, member A##AF020044|CLEC11A|6320|C-type lectin domain family 11, member A##NM_002975|CLEC11A|6320|C-type lectin domain family 11, member A##AK314141|CLEC11A|6320|C-type lectin domain family 11, member A##BC095544|GPR32|2854|G protein-coupled receptor 32##BC067453|GPR32|2854|G protein-coupled receptor 32##BC067454|GPR32|2854|G protein-coupled receptor 32##NM_001506|GPR32|2854|G protein-coupled receptor 32##NM_033068|ACPT|93650|acid phosphatase, testicular##NM_199250|C19orf48|84798|chromosome 19 open reading frame 48##NM_199249|C19orf48|84798|chromosome 19 open reading frame 48	0.988061	CTCF.p2:-19:0.988
chr20	17947764	17947856	reg1037371.p1	3.689	+	BC054871 NM_001014977 NM_178477 BC062735	-267212	+	NM_001159495	-273491	+	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	-284927	-	BT007191 AB464237 TSC_hg19_v1_chr20_-_17949155 AK223308 AK001793 AK129505 NM_014426 BC093623 BC093980 BC143274	1404	-	TSC_hg19_v1_chr20_-_17949438 BC002724 BC062638 BC064555 BC073171 AK123903 AK308017 AK296947 BC000100 AF121855 NM_152227	1630	-	TSC_hg19_v1_chr20_+_17949742 AF306686 AK315532 AF306684 AF306685 AK027503 BC016869 NM_052865	1852	+	BC054871|BANF2|140836|barrier to autointegration factor 2##NM_001014977|BANF2|140836|barrier to autointegration factor 2##NM_178477|BANF2|140836|barrier to autointegration factor 2##BC062735|BANF2|140836|barrier to autointegration factor 2##NM_001159495|BANF2|140836|barrier to autointegration factor 2##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BT007191|SNX5|27131|sorting nexin 5##AK223308|SNX5|27131|sorting nexin 5##AK001793|SNX5|27131|sorting nexin 5##AK129505|SNX5|27131|sorting nexin 5##NM_014426|SNX5|27131|sorting nexin 5##BC093623|SNX5|27131|sorting nexin 5##BC093980|SNX5|27131|sorting nexin 5##BC143274|SNX5|27131|sorting nexin 5##BC002724|SNX5|27131|sorting nexin 5##BC062638|SNX5|27131|sorting nexin 5##AK123903|SNX5|27131|sorting nexin 5##AK308017|SNX5|27131|sorting nexin 5##AK296947|SNX5|27131|sorting nexin 5##BC000100|SNX5|27131|sorting nexin 5##AF121855|SNX5|27131|sorting nexin 5##NM_152227|SNX5|27131|sorting nexin 5##AF306686|C20orf72|92667|chromosome 20 open reading frame 72##AK315532|C20orf72|92667|chromosome 20 open reading frame 72##AF306684|C20orf72|92667|chromosome 20 open reading frame 72##AF306685|C20orf72|92667|chromosome 20 open reading frame 72##AK027503|C20orf72|92667|chromosome 20 open reading frame 72##BC016869|C20orf72|92667|chromosome 20 open reading frame 72##NM_052865|C20orf72|92667|chromosome 20 open reading frame 72	0.0	
chr3	176381754	176381886	reg1038057.p1	3.689	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	-1804730	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	-2223100	+	BC032555 NM_014932	-3265577	+	TSC_hg19_v1_chr3_-_176914267 BX648935	532430	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	533131	-	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	533239	-	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.870505	CTCF.p2:34:0.871
chr7	135389007	135389129	reg1037106.p2	3.689	+	TSC_hg19_v1_chr7_+_135347230 NM_001130929 BC063529 BC073942 BC021734 BC107765 BC047474 BC016741 BC040872	-41807	+	TSC_hg19_v1_chr7_+_135242675 NM_015135 BC136624 AK297307 BC146784 D86978	-146380	+	BC035590 U71267 U71268 AL389980 TSC_hg19_v1_chr7_-_135194851 AK314540 AK074493 AK300365 NM_001008225 NM_001190847 NM_001190848 NM_001190849 NM_001190850 NM_013316	-194208	-	AF169301 NM_012450 BC030689 TSC_hg19_v1_chr7_-_135412940 AB208809	23868	-	BC137311 BC137312 AK297754 AY358803 AK290250 AK310180 NM_205855	44411	-	AF130088 TSC_hg19_v1_chr7_-_135613232	224152	-	NM_001130929|C7orf73|647087|chromosome 7 open reading frame 73##BC063529|C7orf73|647087|chromosome 7 open reading frame 73##BC073942|C7orf73|647087|chromosome 7 open reading frame 73##BC021734|C7orf73|647087|chromosome 7 open reading frame 73##BC107765|C7orf73|647087|chromosome 7 open reading frame 73##BC047474|C7orf73|647087|chromosome 7 open reading frame 73##BC016741|C7orf73|647087|chromosome 7 open reading frame 73##BC040872|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##NM_015135|NUP205|23165|nucleoporin 205kDa##BC136624|NUP205|23165|nucleoporin 205kDa##AK297307|NUP205|23165|nucleoporin 205kDa##BC146784|NUP205|23165|nucleoporin 205kDa##D86978|NUP205|23165|nucleoporin 205kDa##BC035590|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71267|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##U71268|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AL389980|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK314540|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK074493|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AK300365|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001008225|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190847|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190848|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190849|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_001190850|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##NM_013316|CNOT4|4850|CCR4-NOT transcription complex, subunit 4##AF169301|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##NM_012450|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##BC030689|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##AB208809|SLC13A4|26266|solute carrier family 13 (sodium/sulfate symporters), member 4##BC137311|FAM180A|389558|family with sequence similarity 180, member A##BC137312|FAM180A|389558|family with sequence similarity 180, member A##AK297754|FAM180A|389558|family with sequence similarity 180, member A##AY358803|FAM180A|389558|family with sequence similarity 180, member A##AK290250|FAM180A|389558|family with sequence similarity 180, member A##AK310180|FAM180A|389558|family with sequence similarity 180, member A##NM_205855|FAM180A|389558|family with sequence similarity 180, member A##AF130088|LUZP6|767558|leucine zipper protein 6	0.978927	CTCF.p2:-17:0.979
chr7	99771701	99771772	reg1042081.p1	3.689	+	TSC_hg19_v1_chr7_-_99766239 NM_024637	-5431	-	BC012976 TSC_hg19_v1_chr7_-_99766194 AF316113	-5533	-	TSC_hg19_v1_chr7_-_99756347 AK054872	-15388	-	AB587513 AM392909 CU693354 DQ893325 DQ896641 AL834418 TSC_hg19_v1_chr7_-_99774981 AB209144 AK096281 BC027972 NM_152742 AY093588	3191	-	AJ007798 TSC_hg19_v1_chr7_+_99775380	3628	+	TSC_hg19_v1_chr7_+_99775540 NM_012447 AK292394 BC146806 AK302693 BC047490 BC028684 AL833816 BC140932	3827	+	NM_024637|GAL3ST4|79690|galactose-3-O-sulfotransferase 4##BC012976|GAL3ST4|79690|galactose-3-O-sulfotransferase 4##AF316113|GAL3ST4|79690|galactose-3-O-sulfotransferase 4##AK054872|C7orf43|55262|chromosome 7 open reading frame 43##AM392909|GPC2|221914|glypican 2##DQ893325|GPC2|221914|glypican 2##DQ896641|GPC2|221914|glypican 2##AL834418|GPC2|221914|glypican 2##AK096281|GPC2|221914|glypican 2##BC027972|GPC2|221914|glypican 2##NM_152742|GPC2|221914|glypican 2##AY093588|GPC2|221914|glypican 2##AJ007798|STAG3|10734|stromal antigen 3##NM_012447|STAG3|10734|stromal antigen 3##AK292394|STAG3|10734|stromal antigen 3##BC146806|STAG3|10734|stromal antigen 3##AK302693|STAG3|10734|stromal antigen 3##BC047490|STAG3|10734|stromal antigen 3##BC028684|STAG3|10734|stromal antigen 3##AL833816|STAG3|10734|stromal antigen 3##BC140932|STAG3|10734|stromal antigen 3	0.146393	
chr9	74654166	74654331	reg1002656.p2	3.689	+	TSC_hg19_v1_chr9_+_74526557 AK311206 BC028019 BC052375 AK307186 CU690912	-127660	+	TSC_hg19_v1_chr9_+_74526393 NM_182505 BC010179	-127847	+	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	-128092	-	BC044620 BC053956 BC036255 NM_001128618	21261	-	AK300418 NM_001242507	75262	+	NM_001242505 NM_001242506 NM_004293 TSC_hg19_v1_chr9_+_74764283 BC053584	110031	+	AK311206|C9orf85|138241|chromosome 9 open reading frame 85##BC028019|C9orf85|138241|chromosome 9 open reading frame 85##BC052375|C9orf85|138241|chromosome 9 open reading frame 85##AK307186|C9orf85|138241|chromosome 9 open reading frame 85##NM_182505|C9orf85|138241|chromosome 9 open reading frame 85##BC010179|C9orf85|138241|chromosome 9 open reading frame 85##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1##BC044620|C9orf57|138240|chromosome 9 open reading frame 57##BC053956|C9orf57|138240|chromosome 9 open reading frame 57##BC036255|C9orf57|138240|chromosome 9 open reading frame 57##NM_001128618|C9orf57|138240|chromosome 9 open reading frame 57##AK300418|GDA|9615|guanine deaminase##NM_001242507|GDA|9615|guanine deaminase##NM_001242505|GDA|9615|guanine deaminase##NM_001242506|GDA|9615|guanine deaminase##NM_004293|GDA|9615|guanine deaminase##BC053584|GDA|9615|guanine deaminase	0.0	
chr9	97623429	97623549	reg1036357.p1	3.689	+	NM_001193329 AJ560639	-101492	+	BC029616 TSC_hg19_v1_chr9_+_97488999	-134486	+	TSC_hg19_v1_chr9_+_97488980 NM_001193331 NM_032823 AK296782 AK057450	-134527	+	AK298959 TSC_hg19_v1_chr9_+_97766501 AK300486	142986	+	X66894 NM_001243743	456031	-	AK312548 AK222871 TSC_hg19_v1_chr9_-_98079974 BC015748 X66893 AK304887 NM_000136 NM_001243744	456442	-	NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3##AJ560639|C9orf3|84909|chromosome 9 open reading frame 3##BC029616|C9orf3|84909|chromosome 9 open reading frame 3##NM_001193331|C9orf3|84909|chromosome 9 open reading frame 3##NM_032823|C9orf3|84909|chromosome 9 open reading frame 3##AK296782|C9orf3|84909|chromosome 9 open reading frame 3##AK057450|C9orf3|84909|chromosome 9 open reading frame 3##AK298959|C9orf3|84909|chromosome 9 open reading frame 3##AK300486|C9orf3|84909|chromosome 9 open reading frame 3##X66894|FANCC|2176|Fanconi anemia, complementation group C##NM_001243743|FANCC|2176|Fanconi anemia, complementation group C##AK312548|FANCC|2176|Fanconi anemia, complementation group C##AK222871|FANCC|2176|Fanconi anemia, complementation group C##BC015748|FANCC|2176|Fanconi anemia, complementation group C##X66893|FANCC|2176|Fanconi anemia, complementation group C##AK304887|FANCC|2176|Fanconi anemia, complementation group C##NM_000136|FANCC|2176|Fanconi anemia, complementation group C##NM_001243744|FANCC|2176|Fanconi anemia, complementation group C	0.0	
chr10	56476015	56476123	reg1036831.p1	3.688	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	-1944643	-	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-2401954	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-3016722	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	84929	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	882705	+	TSC_hg19_v1_chr10_-_58121017 AF067656 AK225509	1644945	-	AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5##AF067656|ZWINT|11130|ZW10 interactor##AK225509|ZWINT|11130|ZW10 interactor	0.613994	CTCF.p2:19:0.614
chr16	22988854	22988948	reg1027617.p2	3.688	+	AB209794 AF105374 AF105375 NM_006043 BC093734 BC093736	-163050	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	-163399	+	NM_001135865 BC036263 AK296338 CU690320	-463919	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	171648	-	U48936 BC059391 NM_001039 TSC_hg19_v1_chr16_+_23194066	205151	+	NM_000336 BC036352 X87159 AK313192	324726	+	AB209794|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105374|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105375|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_006043|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093734|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093736|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_001135865|LOC100132247|100132247|nuclear pore complex interacting protein related gene##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296338|LOC100132247|100132247|nuclear pore complex interacting protein related gene##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31##U48936|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##BC059391|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_001039|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_000336|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC036352|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##X87159|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##AK313192|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta	0.33221	CTCF.p2:0:0.332
chr16	61182936	61183028	reg1040016.p2	3.688	+	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-2414785	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-2464326	-	TSC_hg19_v1_chr16_-_58663742 BC040523 AL833549 NM_016284 NM_206999	-2519237	-	AK124734 NM_001796	887756	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	3972920	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	3972986	-	DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.035634	
chr16	740399	740531	reg1040401.p2	3.688	+	AL136863 NM_032259 AK301146	-63	-	TSC_hg19_v1_chr16_-_734358 BC137100 BC137101 NM_001005920	-6068	-	TSC_hg19_v1_chr16_-_734335 DQ074695 AF370420 BC073785	-6133	-	TSC_hg19_v1_chr16_-_755827 BC036680 NM_153350	15350	-	TSC_hg19_v1_chr16_+_765128 BC000662 NM_024042	24660	+	TSC_hg19_v1_chr16_+_771145 BC001181 NM_023933 BC002624	30698	+	AL136863|WDR24|84219|WD repeat domain 24##NM_032259|WDR24|84219|WD repeat domain 24##AK301146|WDR24|84219|WD repeat domain 24##BC137100|JMJD8|339123|jumonji domain containing 8##BC137101|JMJD8|339123|jumonji domain containing 8##NM_001005920|JMJD8|339123|jumonji domain containing 8##DQ074695|JMJD8|339123|jumonji domain containing 8##AF370420|JMJD8|339123|jumonji domain containing 8##BC073785|JMJD8|339123|jumonji domain containing 8##BC036680|FBXL16|146330|F-box and leucine-rich repeat protein 16##NM_153350|FBXL16|146330|F-box and leucine-rich repeat protein 16##BC000662|METRN|79006|meteorin, glial cell differentiation regulator##NM_024042|METRN|79006|meteorin, glial cell differentiation regulator##BC001181|FAM173A|65990|family with sequence similarity 173, member A##NM_023933|FAM173A|65990|family with sequence similarity 173, member A##BC002624|FAM173A|65990|family with sequence similarity 173, member A	0.0	
chr20	52370838	52370936	reg1025984.p1	3.688	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-160088	-	AF041259 NM_006526	-171252	-	AK302570 NM_001193421	-569066	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	316175	-	AK315220 NM_003657	316416	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	419633	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr20	5630723	5630815	reg1025812.p1	3.688	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	-39182	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-335733	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-523074	+	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	100297	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	261357	+	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	300354	-	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	0.0	
chr21	44734207	44734376	reg1032414.p2	3.688	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-145117	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-206607	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-206666	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	111698	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	112704	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	345071	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr4	46276903	46277013	reg1041325.p1	3.688	+	CU689108 DQ890976 DQ894150 CR933628 BC031087 AK289806 AK299884 BX648937 NM_173536 AK122845	-150945	-	TSC_hg19_v1_chr4_-_44728574 AK296051 AB209904 AK055639 AY173948 AK129655 AK308920 AF247786 NM_138335	-1548394	-	TSC_hg19_v1_chr4_+_44680469 NM_021927 BX647242 BC036768 BC012338 AK225314 AK023282 AK308667	-1596498	+	TSC_hg19_v1_chr4_-_46391400 AK125179 NM_001114175	114441	-	TSC_hg19_v1_chr4_-_46391484 AK307128	114555	-	AB209295 AK293466 S62907 TSC_hg19_v1_chr4_-_46391998 NM_000807	114955	-	DQ890976|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##DQ894150|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##CR933628|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BC031087|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK289806|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK299884|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##BX648937|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##NM_173536|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK122845|GABRG1|2565|gamma-aminobutyric acid (GABA) A receptor, gamma 1##AK296051|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AB209904|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK055639|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AY173948|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AK129655|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##AF247786|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_138335|GNPDA2|132789|glucosamine-6-phosphate deaminase 2##NM_021927|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BX647242|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC036768|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##BC012338|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK225314|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK023282|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK308667|GUF1|60558|GUF1 GTPase homolog (S. cerevisiae)##AK125179|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_001114175|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK307128|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AB209295|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##AK293466|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##S62907|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2##NM_000807|GABRA2|2555|gamma-aminobutyric acid (GABA) A receptor, alpha 2	0.821366	CTCF.p2:-9:0.821
chr5	89311445	89311605	reg1034183.p2	3.688	+	AL833268 AL833274 NM_001131005 NM_001193347	-1111631	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-1126261	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-1126405	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	394014	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	458657	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	459053	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr8	37002503	37002608	reg1032865.p2	3.688	+	NM_001031836 AK302391 BC028701	-360685	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-1909568	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-3545060	-	TSC_hg19_v1_chr8_-_37457377 AK025743	454813	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	550762	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	591551	+	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2	0.0	
chr1	111162286	111162466	reg1002264.p2	3.687	+	AK290061 NM_004974 TSC_hg19_v1_chr1_-_111148981	-13394	-	NM_005549	-100580	-	AY358683 AF333024 NM_032414 AY029225 BC025399 DQ891570 DQ894763	-168585	+	BC043564 NM_001204269	11719	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	54976	-	TSC_hg19_v1_chr1_-_111217553 AK314009	55168	-	AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_005549|KCNA10|3744|potassium voltage-gated channel, shaker-related subfamily, member 10##AY358683|PROK1|84432|prokineticin 1##AF333024|PROK1|84432|prokineticin 1##NM_032414|PROK1|84432|prokineticin 1##AY029225|PROK1|84432|prokineticin 1##BC025399|PROK1|84432|prokineticin 1##DQ891570|PROK1|84432|prokineticin 1##DQ894763|PROK1|84432|prokineticin 1##BC043564|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_001204269|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3	0.0	
chr11	64102594	64102713	reg1026251.p1	3.687	+	TSC_hg19_v1_chr11_+_64085676 AF124993 AF110731 BC113723 BC113725 BC143849 BC171733 AF112212 AF242525 AF231705 CR457203 HQ258129 AJ249483	-16931	+	BC110983 NM_012094 NM_181651 NM_181652 TSC_hg19_v1_chr11_+_64085600 AF197952	-17074	+	TSC_hg19_v1_chr11_-_64085009 AK312050 DQ892261 DQ895463 BC105294 BC029482 BC017172 AF161501 AF229068 NM_016404	-17632	-	TSC_hg19_v1_chr11_+_64107692 BC151218 BC151222 NM_032251 AK090436 BC140822 BC140824 BC141866	5049	+	TSC_hg19_v1_chr11_+_64120348 AK126728	17706	+	TSC_hg19_v1_chr11_+_64126642 AK223561 NM_001006944 NM_003942 AJ010119 AK292163 AK313567 BC047896 AK298507 BC028079 CU690526 AF074715	24078	+	AF124993|PRDX5|25824|peroxiredoxin 5##AF110731|PRDX5|25824|peroxiredoxin 5##BC113723|PRDX5|25824|peroxiredoxin 5##BC113725|PRDX5|25824|peroxiredoxin 5##BC143849|PRDX5|25824|peroxiredoxin 5##BC171733|PRDX5|25824|peroxiredoxin 5##AF112212|PRDX5|25824|peroxiredoxin 5##AF242525|PRDX5|25824|peroxiredoxin 5##AF231705|PRDX5|25824|peroxiredoxin 5##CR457203|PRDX5|25824|peroxiredoxin 5##HQ258129|PRDX5|25824|peroxiredoxin 5##AJ249483|PRDX5|25824|peroxiredoxin 5##BC110983|PRDX5|25824|peroxiredoxin 5##NM_012094|PRDX5|25824|peroxiredoxin 5##NM_181651|PRDX5|25824|peroxiredoxin 5##NM_181652|PRDX5|25824|peroxiredoxin 5##AF197952|PRDX5|25824|peroxiredoxin 5##AK312050|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ892261|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##DQ895463|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC105294|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC029482|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC017172|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF161501|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##AF229068|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##NM_016404|TRMT112|51504|tRNA methyltransferase 11-2 homolog (S. cerevisiae)##BC151218|CCDC88B|283234|coiled-coil domain containing 88B##BC151222|CCDC88B|283234|coiled-coil domain containing 88B##NM_032251|CCDC88B|283234|coiled-coil domain containing 88B##AK090436|CCDC88B|283234|coiled-coil domain containing 88B##BC140822|CCDC88B|283234|coiled-coil domain containing 88B##BC140824|CCDC88B|283234|coiled-coil domain containing 88B##BC141866|CCDC88B|283234|coiled-coil domain containing 88B##AK126728|CCDC88B|283234|coiled-coil domain containing 88B##AK223561|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_001006944|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##NM_003942|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AJ010119|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK292163|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK313567|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC047896|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AK298507|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##BC028079|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4##AF074715|RPS6KA4|8986|ribosomal protein S6 kinase, 90kDa, polypeptide 4	0.0	
chr11	73915062	73915156	reg1034457.p1	3.687	+	TSC_hg19_v1_chr11_+_73882440 AB385584 CU678344 DQ892348 DQ895778	-32654	+	TSC_hg19_v1_chr11_+_73882350 BC003046 BC050705 AK225647 AF157028 NM_016147 AK001381	-32766	+	TSC_hg19_v1_chr11_+_73882299 AK022725	-32827	+	BC089446 TSC_hg19_v1_chr11_-_74022686 BC040582 AL833965 AY358521 AK300598 AY327887 BC117333 BC126170 AY313448 NM_182904	107573	-	TSC_hg19_v1_chr11_-_74109469 BC027950 AB019210 AK056591 BC059360 NM_173582	194381	-	CR936625 DQ192291 NM_005472	263487	-	DQ892348|PPME1|51400|protein phosphatase methylesterase 1##DQ895778|PPME1|51400|protein phosphatase methylesterase 1##BC003046|PPME1|51400|protein phosphatase methylesterase 1##BC050705|PPME1|51400|protein phosphatase methylesterase 1##AK225647|PPME1|51400|protein phosphatase methylesterase 1##AF157028|PPME1|51400|protein phosphatase methylesterase 1##NM_016147|PPME1|51400|protein phosphatase methylesterase 1##AK001381|PPME1|51400|protein phosphatase methylesterase 1##AK022725|PPME1|51400|protein phosphatase methylesterase 1##BC089446|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC040582|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AL833965|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY358521|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AK300598|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY327887|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC117333|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##BC126170|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AY313448|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##NM_182904|P4HA3|283208|prolyl 4-hydroxylase, alpha polypeptide III##AB019210|PGM2L1|283209|phosphoglucomutase 2-like 1##AK056591|PGM2L1|283209|phosphoglucomutase 2-like 1##BC059360|PGM2L1|283209|phosphoglucomutase 2-like 1##NM_173582|PGM2L1|283209|phosphoglucomutase 2-like 1##CR936625|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##DQ192291|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3##NM_005472|KCNE3|10008|potassium voltage-gated channel, Isk-related family, member 3	0.069235	
chr16	89626918	89627052	reg1038977.p1	3.687	+	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	-52171	+	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	-70054	-	AK293862 NM_001242885	-239445	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	80	+	TSC_hg19_v1_chr16_+_89627089 BC093063 AK026501 AK093246 AK130964 AK290893 AK294655 AK308545 BC066320 D28432 X64707 AK025405 AK127579 AK130963 AK297198 BC007345 BC004954 BC006179 BC063378 BC007805 BC013078 BC014167 BC027463 BC010994 BC000851 BC020804 NM_033251 BC007563	122	+	TSC_hg19_v1_chr16_+_89642221 AJ133798 NM_014427 NM_153636 BC064577 BC035334 CU690070 AB463543	15222	+	NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13##BC093063|RPL13|6137|ribosomal protein L13##AK026501|RPL13|6137|ribosomal protein L13##AK130964|RPL13|6137|ribosomal protein L13##AK290893|RPL13|6137|ribosomal protein L13##AK294655|RPL13|6137|ribosomal protein L13##AK308545|RPL13|6137|ribosomal protein L13##BC066320|RPL13|6137|ribosomal protein L13##D28432|RPL13|6137|ribosomal protein L13##X64707|RPL13|6137|ribosomal protein L13##AK025405|RPL13|6137|ribosomal protein L13##AK127579|RPL13|6137|ribosomal protein L13##AK130963|RPL13|6137|ribosomal protein L13##AK297198|RPL13|6137|ribosomal protein L13##BC007345|RPL13|6137|ribosomal protein L13##BC004954|RPL13|6137|ribosomal protein L13##BC006179|RPL13|6137|ribosomal protein L13##BC063378|RPL13|6137|ribosomal protein L13##BC007805|RPL13|6137|ribosomal protein L13##BC013078|RPL13|6137|ribosomal protein L13##BC014167|RPL13|6137|ribosomal protein L13##BC027463|RPL13|6137|ribosomal protein L13##BC010994|RPL13|6137|ribosomal protein L13##BC000851|RPL13|6137|ribosomal protein L13##BC020804|RPL13|6137|ribosomal protein L13##NM_033251|RPL13|6137|ribosomal protein L13##BC007563|RPL13|6137|ribosomal protein L13##AJ133798|CPNE7|27132|copine VII##NM_014427|CPNE7|27132|copine VII##NM_153636|CPNE7|27132|copine VII##BC064577|CPNE7|27132|copine VII##BC035334|CPNE7|27132|copine VII	0.0	
chr17	1388421	1388601	reg1027675.p2	3.687	+	BT007277 DQ891147 DQ894327 AB528363 TSC_hg19_v1_chr17_-_1359527 D10656 BC001718 BC009837 AK291060 BC008506 NM_005206 NM_016823	-29019	-	TSC_hg19_v1_chr17_-_1303556 NM_006761	-84958	-	TSC_hg19_v1_chr17_-_1303504 BT007161 CU674076 EU176525 U28936 AB590347 BC000179 AX775995 U43399 U43430 U54778 U20972 BC001440 AY883089 AK295260 AK295997 AK296050 AK296555 AK128785 AK316185 AK316201	-85042	-	TSC_hg19_v1_chr17_-_1389055 NM_001080950	527	-	TSC_hg19_v1_chr17_-_1389335 AK304782	885	-	TSC_hg19_v1_chr17_-_1394974 NM_033375	6434	-	BT007277|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##DQ891147|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##DQ894327|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##D10656|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC001718|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC009837|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##AK291060|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##BC008506|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_005206|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_016823|CRK|1398|v-crk sarcoma virus CT10 oncogene homolog (avian)##NM_006761|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BT007161|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##EU176525|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U28936|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC000179|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43399|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U43430|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U54778|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##U20972|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##BC001440|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AY883089|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295260|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK295997|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296050|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK296555|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK128785|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316185|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##AK316201|YWHAE|7531|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide##NM_001080950|MYO1C|4641|myosin IC##AK304782|MYO1C|4641|myosin IC##NM_033375|MYO1C|4641|myosin IC	0.0	
chr19	16683426	16683571	reg1033612.p2	3.687	+	TSC_hg19_v1_chr19_+_16683381 AK094229	-101	+	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	-302	-	TSC_hg19_v1_chr19_-_16653256 NM_006387	-30235	-	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	55502	-	TSC_hg19_v1_chr19_-_16770944 AK025602 BC069279 BX648276	87431	-	TSC_hg19_v1_chr19_-_16770956 NM_024104	87464	-	BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##NM_006387|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26##AK025602|C19orf42|79086|chromosome 19 open reading frame 42##BC069279|C19orf42|79086|chromosome 19 open reading frame 42##BX648276|C19orf42|79086|chromosome 19 open reading frame 42##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42	0.0	
chr2	114557085	114557175	reg1032426.p1	3.687	+	AK025657 AK315719 TSC_hg19_v1_chr2_-_114514220 BC050096 BC018537 NM_025181	-42833	-	AF529364 CU676258 TSC_hg19_v1_chr2_-_114514079 AY358620	-43052	-	TSC_hg19_v1_chr2_+_114384849 AK289496 AF095350 AF095351 BC126129 BC144050 BC144052	-172224	+	TSC_hg19_v1_chr2_+_114647549 BC044590 NM_005721 AF127773	90417	+	TSC_hg19_v1_chr2_+_114647665 AK316213	90535	+	TSC_hg19_v1_chr2_+_114647673 AK303988	90542	+	AK025657|SLC35F5|80255|solute carrier family 35, member F5##AK315719|SLC35F5|80255|solute carrier family 35, member F5##BC050096|SLC35F5|80255|solute carrier family 35, member F5##BC018537|SLC35F5|80255|solute carrier family 35, member F5##NM_025181|SLC35F5|80255|solute carrier family 35, member F5##AF529364|SLC35F5|80255|solute carrier family 35, member F5##AY358620|SLC35F5|80255|solute carrier family 35, member F5##AK289496|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095350|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##AF095351|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC126129|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144050|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC144052|RABL2A|11159|RAB, member of RAS oncogene family-like 2A##BC044590|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##NM_005721|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AF127773|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AK316213|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AK303988|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)	0.180753	
chr22	39350143	39350323	reg1024654.p2	3.687	+	TSC_hg19_v1_chr22_-_39268255 AK094829 NM_014292	-81929	-	TSC_hg19_v1_chr22_-_39268222 BC012111 AK293035	-82012	-	TSC_hg19_v1_chr22_-_39268213 CU680218 CU687960 DQ893667 DQ895787 BC064900	-82042	-	NM_001193289 NM_145699 U03891 BC126416 BC144146 CR456393 AB528063 CU012950 CU013238 HQ258100	3377	+	AK024854 NM_004900 U61084 CT841510 AB527109 AB528064 AB528855 CU012951 CU012954 CU013239 CU013242 CU691044 AY743217 EU527884	28198	+	TSC_hg19_v1_chr22_+_39410261 AK313272 AF165520 BC011739 NM_014508 BC021080	60018	+	AK094829|CBX6|23466|chromobox homolog 6##NM_014292|CBX6|23466|chromobox homolog 6##BC012111|CBX6|23466|chromobox homolog 6##AK293035|CBX6|23466|chromobox homolog 6##DQ893667|CBX6|23466|chromobox homolog 6##DQ895787|CBX6|23466|chromobox homolog 6##BC064900|CBX6|23466|chromobox homolog 6##NM_001193289|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##NM_145699|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##U03891|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC126416|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##BC144146|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CR456393|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU012950|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##CU013238|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##HQ258100|APOBEC3A|200315|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A##AK024854|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##NM_004900|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##U61084|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CT841510|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012951|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU012954|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##CU013239|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##CU013242|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AY743217|APOBEC3B|9582|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B##EU527884|APOBEC3D|140564|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D##AK313272|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##AF165520|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC011739|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##NM_014508|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C##BC021080|APOBEC3C|27350|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C	0.0	
chr4	1237340	1237439	reg1032254.p1	3.687	+	CR627052 NM_001199021	-34640	-	BC104228 BC104229 BC112991 BC112992 BC044945 AK091779 AX747178 TSC_hg19_v1_chr4_-_1195337	-42147	-	TSC_hg19_v1_chr4_-_1166969 NM_001128325	-70411	-	AB527760 DQ891918 DQ895102 TSC_hg19_v1_chr4_-_1242878 AF091555 BC011655 U37408	5421	-	TSC_hg19_v1_chr4_-_1242910 BC072021 BC053320 NM_001012614 NM_001328 BC098400	5519	-	TSC_hg19_v1_chr4_+_1243060 AK125775 AK056133	5779	+	CR627052|LOC100130872|100130872|uncharacterized LOC100130872##NM_001199021|SPON2|10417|spondin 2, extracellular matrix protein##BC104228|LOC100130872|100130872|uncharacterized LOC100130872##BC104229|LOC100130872|100130872|uncharacterized LOC100130872##BC112991|LOC100130872|100130872|uncharacterized LOC100130872##BC112992|LOC100130872|100130872|uncharacterized LOC100130872##BC044945|LOC100130872|100130872|uncharacterized LOC100130872##AK091779|LOC100130872|100130872|uncharacterized LOC100130872##NM_001128325|SPON2|10417|spondin 2, extracellular matrix protein##DQ891918|CTBP1|1487|C-terminal binding protein 1##DQ895102|CTBP1|1487|C-terminal binding protein 1##AF091555|CTBP1|1487|C-terminal binding protein 1##BC011655|CTBP1|1487|C-terminal binding protein 1##U37408|CTBP1|1487|C-terminal binding protein 1##BC072021|CTBP1|1487|C-terminal binding protein 1##BC053320|CTBP1|1487|C-terminal binding protein 1##NM_001012614|CTBP1|1487|C-terminal binding protein 1##NM_001328|CTBP1|1487|C-terminal binding protein 1##BC098400|CTBP1|1487|C-terminal binding protein 1##AK125775|C4orf42|92070|chromosome 4 open reading frame 42##AK056133|C4orf42|92070|chromosome 4 open reading frame 42	0.687375	CTCF.p2:-11:0.687
chr5	172221135	172221228	reg1032366.p1	3.687	+	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	-22970	-	AF275799 TSC_hg19_v1_chr5_-_172083715	-137538	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-152928	+	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	40137	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	165267	+	NM_003945 TSC_hg19_v1_chr5_+_172410801 BC119715 BC119714 AK312068 Y15286	189601	+	X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1##NM_003945|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119715|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119714|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##AK312068|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##Y15286|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1	0.0	
chr5	33852553	33852655	reg1037094.p1	3.687	+	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	-411465	+	AK292346 TSC_hg19_v1_chr5_+_33440874 NM_152295	-411748	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	-1140799	+	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	39441	-	TSC_hg19_v1_chr5_-_33892294 AJ250725	39691	-	D88437 NM_016568	83886	+	AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##AK292346|TARS|6897|threonyl-tRNA synthetase##NM_152295|TARS|6897|threonyl-tRNA synthetase##BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##D88437|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##NM_016568|RXFP3|51289|relaxin/insulin-like family peptide receptor 3	0.0	
chr5	68788393	68788486	reg1038766.p1	3.687	+	NM_002538 U53823	-321	+	NM_001038603 NM_001244734 AK055094 BC033689 DQ682656 DQ682657 AK292962	-77493	+	AF085736 NM_133339	-121159	+	U49184 TSC_hg19_v1_chr5_+_68788631 NM_001205254 AK313501 BC029886 AK290697	108	+	NM_001205255 FJ786083 FJ786084 GQ225096 GQ225097 GQ225098 GQ402517 AB587564 DQ892423 DQ895637 AB451306 AB451437	11598	+	BC105980 TSC_hg19_v1_chr5_+_68856047 BX537982 AK315282 NM_001098728 BX647445	67602	+	NM_002538|OCLN|100506658|occludin##U53823|OCLN|100506658|occludin##NM_001038603|MARVELD2|153562|MARVEL domain containing 2##NM_001244734|MARVELD2|153562|MARVEL domain containing 2##AK055094|MARVELD2|153562|MARVEL domain containing 2##BC033689|MARVELD2|153562|MARVEL domain containing 2##DQ682656|MARVELD2|153562|MARVEL domain containing 2##DQ682657|MARVELD2|153562|MARVEL domain containing 2##AK292962|MARVELD2|153562|MARVEL domain containing 2##AF085736|RAD17|5884|RAD17 homolog (S. pombe)##NM_133339|RAD17|5884|RAD17 homolog (S. pombe)##U49184|OCLN|100506658|occludin##NM_001205254|OCLN|100506658|occludin##AK313501|OCLN|100506658|occludin##BC029886|OCLN|100506658|occludin##AK290697|OCLN|100506658|occludin##NM_001205255|OCLN|100506658|occludin##FJ786083|OCLN|100506658|occludin##FJ786084|OCLN|100506658|occludin##GQ225096|OCLN|100506658|occludin##GQ225097|OCLN|100506658|occludin##GQ225098|OCLN|100506658|occludin##GQ402517|OCLN|100506658|occludin##DQ892423|OCLN|100506658|occludin##DQ895637|OCLN|100506658|occludin##AB451306|OCLN|100506658|occludin##AB451437|OCLN|100506658|occludin##BC105980|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BX537982|GTF2H2B|653238|general transcription factor IIH, polypeptide 2B (pseudogene)##AK315282|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##NM_001098728|GTF2H2C|728340|general transcription factor IIH, polypeptide 2C##BX647445|GTF2H2D|730394|general transcription factor IIH, polypeptide 2D	0.0	
chr7	130598229	130598341	reg1035036.p2	3.687	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-179358	-	AF294347 AF431815 BC038415 NM_052933	-226930	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-244690	-	TSC_hg19_v1_chr7_-_130792857 BC047367	194574	-	AK294384 NM_001145354	196569	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	414321	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.0	
chr9	37820360	37820506	reg1032421.p1	3.687	+	TSC_hg19_v1_chr9_+_37800815 BC108686	-19625	+	TSC_hg19_v1_chr9_+_37800784 NM_024345	-19649	+	AF281132 NM_016042 TSC_hg19_v1_chr9_-_37785068 NM_001002269	-35364	-	AK091407 AX746962 TSC_hg19_v1_chr9_-_37904125 BC008500 BC063563	83696	-	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	83933	-	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	248708	-	BC108686|DCAF10|79269|DDB1 and CUL4 associated factor 10##NM_024345|DCAF10|79269|DDB1 and CUL4 associated factor 10##AF281132|EXOSC3|51010|exosome component 3##NM_016042|EXOSC3|51010|exosome component 3##NM_001002269|EXOSC3|51010|exosome component 3##AK091407|MCART1|92014|mitochondrial carrier triple repeat 1##BC008500|MCART1|92014|mitochondrial carrier triple repeat 1##BC063563|MCART1|92014|mitochondrial carrier triple repeat 1##AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B	0.0	
chr10	52534770	52534867	reg1030957.p1	3.686	+	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	-35108	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	-151115	-	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-526478	-	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	110575	-	TSC_hg19_v1_chr10_-_52645440 BC054873 AK000324 NM_001198818 NM_001198819 NM_001198820 NM_014576 NM_138932 NM_138933	110617	-	TSC_hg19_v1_chr10_+_52750904 NM_001098512	216089	+	NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor##BC054873|A1CF|29974|APOBEC1 complementation factor##AK000324|A1CF|29974|APOBEC1 complementation factor##NM_001198818|A1CF|29974|APOBEC1 complementation factor##NM_001198819|A1CF|29974|APOBEC1 complementation factor##NM_001198820|A1CF|29974|APOBEC1 complementation factor##NM_014576|A1CF|29974|APOBEC1 complementation factor##NM_138932|A1CF|29974|APOBEC1 complementation factor##NM_138933|A1CF|29974|APOBEC1 complementation factor##NM_001098512|PRKG1|5592|protein kinase, cGMP-dependent, type I	0.741407	CTCF.p2:26:0.741
chr14	98674656	98674756	reg1033914.p2	3.686	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-1410991	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-1705922	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-1705960	+	AK098639 NM_182560	503243	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	1062911	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	1063184	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.021335	
chr16	651007	651099	reg1029661.p1	3.686	+	NM_021168 BC028696 TSC_hg19_v1_chr16_+_640232	-10842	+	TSC_hg19_v1_chr16_+_640099 AY823398	-10947	+	TSC_hg19_v1_chr16_+_640067 NM_001172665 NM_001172666	-10986	+	AK075356 AK314757 NM_053284	29918	+	TSC_hg19_v1_chr16_-_686303 AK293046 AK294482 AK295628 BC047118 AK057077 BC007207 NM_001040160 NM_001040161 NM_001040162 NM_001040165 NM_032366	35279	-	TSC_hg19_v1_chr16_+_691832 BC001912 NM_138418	40784	+	NM_021168|RAB40C|57799|RAB40C, member RAS oncogene family##BC028696|RAB40C|57799|RAB40C, member RAS oncogene family##AY823398|RAB40C|57799|RAB40C, member RAS oncogene family##NM_001172665|RAB40C|57799|RAB40C, member RAS oncogene family##NM_001172666|RAB40C|57799|RAB40C, member RAS oncogene family##AK075356|WFIKKN1|117166|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1##AK314757|WFIKKN1|117166|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1##NM_053284|WFIKKN1|117166|WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1##AK294482|C16orf13|84326|chromosome 16 open reading frame 13##AK295628|C16orf13|84326|chromosome 16 open reading frame 13##BC047118|C16orf13|84326|chromosome 16 open reading frame 13##AK057077|C16orf13|84326|chromosome 16 open reading frame 13##BC007207|C16orf13|84326|chromosome 16 open reading frame 13##NM_001040160|C16orf13|84326|chromosome 16 open reading frame 13##NM_001040161|C16orf13|84326|chromosome 16 open reading frame 13##NM_001040162|C16orf13|84326|chromosome 16 open reading frame 13##NM_001040165|C16orf13|84326|chromosome 16 open reading frame 13##NM_032366|C16orf13|84326|chromosome 16 open reading frame 13##BC001912|FAM195A|84331|family with sequence similarity 195, member A##NM_138418|FAM195A|84331|family with sequence similarity 195, member A	0.773135	CTCF.p2:-1:0.773
chr17	10587334	10587445	reg1035723.p1	3.686	+	NM_002470 TSC_hg19_v1_chr17_-_10560627	-26762	-	NM_001100112 BC093082 AK299440 AK300702 AK308102 BX510904 NM_017534	-134412	-	AK310004 NM_005963	-165531	-	TSC_hg19_v1_chr17_-_10600869 DQ891605 DQ894798 AF026852 AF183424 BC015504 AK098826 AK315595 AK074588 NM_004589	13464	-	NM_020233 BC070155 AB073393 AK292629 BC001294	13559	+	AY550194 NM_001004313	46256	-	NM_002470|MYH3|4621|myosin, heavy chain 3, skeletal muscle, embryonic##NM_001100112|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##BC093082|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK299440|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK300702|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK308102|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##BX510904|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##NM_017534|MYH2|4620|myosin, heavy chain 2, skeletal muscle, adult##AK310004|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult##NM_005963|MYH1|4619|myosin, heavy chain 1, skeletal muscle, adult##DQ891605|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##DQ894798|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF026852|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AF183424|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##BC015504|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK098826|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK315595|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##AK074588|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_004589|SCO1|6341|SCO cytochrome oxidase deficient homolog 1 (yeast)##NM_020233|C17orf48|56985|chromosome 17 open reading frame 48##BC070155|C17orf48|56985|chromosome 17 open reading frame 48##AB073393|C17orf48|56985|chromosome 17 open reading frame 48##AK292629|C17orf48|56985|chromosome 17 open reading frame 48##BC001294|C17orf48|56985|chromosome 17 open reading frame 48##AY550194|TMEM220|388335|transmembrane protein 220##NM_001004313|TMEM220|388335|transmembrane protein 220	0.096328	
chr18	74138784	74138893	reg1034516.p1	3.686	+	BC108287 TSC_hg19_v1_chr18_-_74092260	-46588	-	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-999216	-	TSC_hg19_v1_chr18_+_72998258 AK223545 BC024152	-1140496	+	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	68317	-	TSC_hg19_v1_chr18_-_74534239 BC032908	395401	-	TSC_hg19_v1_chr18_+_74534512 BX648028	395672	+	BC108287|ZNF516|9658|zinc finger protein 516##BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1##BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1##D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC032908|LOC100131655|100131655|uncharacterized LOC100131655##BX648028|ZNF236|7776|zinc finger protein 236	0.508246	CTCF.p2:19:0.508
chr19	50391387	50391453	reg1035840.p2	3.686	+	TSC_hg19_v1_chr19_+_50381392 AK090606 AX746531	-9962	+	NM_001168222 NM_024682 TSC_hg19_v1_chr19_+_50380945 BC003516 AK022230 AK300007 AK309412 AB449903 AB590884 CU678472	-10571	+	BC016043 BC007416 AK226004 BC051844 TSC_hg19_v1_chr19_-_50380601 BC015562 NM_032375 AK123687 NM_001098633 NM_001098632	-10873	-	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	8733	-	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	21682	-	NM_012068 AK290592	40568	+	AK090606|TBC1D17|79735|TBC1 domain family, member 17##NM_001168222|TBC1D17|79735|TBC1 domain family, member 17##NM_024682|TBC1D17|79735|TBC1 domain family, member 17##BC003516|TBC1D17|79735|TBC1 domain family, member 17##AK022230|TBC1D17|79735|TBC1 domain family, member 17##AK300007|TBC1D17|79735|TBC1 domain family, member 17##AK309412|TBC1D17|79735|TBC1 domain family, member 17##AB449903|TBC1D17|79735|TBC1 domain family, member 17##BC016043|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC007416|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##AK226004|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC051844|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC015562|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_032375|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##AK123687|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_001098633|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##NM_001098632|AKT1S1|84335|AKT1 substrate 1 (proline-rich)##BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5	0.0	
chr20	43271583	43271745	reg1037392.p2	3.686	+	AK309209 TSC_hg19_v1_chr20_+_43211227	-60441	+	NM_007066 NM_181804 NM_181805 BC104256 BC104257 TSC_hg19_v1_chr20_+_43160482 AK312048 AF182032	-111148	+	AK295120 AK309993 TSC_hg19_v1_chr20_-_43150704 NM_006811 NM_198941	-120957	-	AB528992 DQ892681 DQ895924 TSC_hg19_v1_chr20_-_43280341 X02994 AK223397	8634	-	BC007678 TSC_hg19_v1_chr20_-_43280372 BC040226 NM_000022	8711	-	BC058074 TSC_hg19_v1_chr20_+_43343549 AK074695	71878	+	AK309209|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_007066|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_181804|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_181805|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##BC104256|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##BC104257|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AK312048|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AF182032|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AK295120|SERINC3|10955|serine incorporator 3##AK309993|SERINC3|10955|serine incorporator 3##NM_006811|SERINC3|10955|serine incorporator 3##NM_198941|SERINC3|10955|serine incorporator 3##DQ892681|ADA|100|adenosine deaminase##DQ895924|ADA|100|adenosine deaminase##X02994|ADA|100|adenosine deaminase##AK223397|ADA|100|adenosine deaminase##BC007678|ADA|100|adenosine deaminase##BC040226|ADA|100|adenosine deaminase##NM_000022|ADA|100|adenosine deaminase##BC058074|WISP2|8839|WNT1 inducible signaling pathway protein 2	0.0	
chr21	44394127	44394211	reg1035025.p2	3.686	+	TSC_hg19_v1_chr21_+_44313422 NM_001001503 NM_021075 BC054016 BC021217 AK308228 AK289586 BC033766 CU676876 CU689730 CR542174 CR542190	-80768	+	TSC_hg19_v1_chr21_-_44299690 BC001074 NM_018669 NM_033661 AK298015	-94485	-	AB590172 CU675357 DQ892967 DQ896215 TSC_hg19_v1_chr21_-_44299643 AK292923 AK315008 AJ243912 AJ243913 BC006341	-94545	-	TSC_hg19_v1_chr21_+_44394671 AY142115 AY196965 NM_004571 BC000735	485	+	TSC_hg19_v1_chr21_+_44394747 Y13613 AK294794 AK222892 U68727	570	+	TSC_hg19_v1_chr21_-_44495940 BC000440 X82166 BC011381 AK313691 L14577 BC010242 NM_000071	101797	-	NM_001001503|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##NM_021075|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC054016|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC021217|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK308228|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK289586|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC033766|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542174|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542190|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC001074|WDR4|10785|WD repeat domain 4##NM_018669|WDR4|10785|WD repeat domain 4##NM_033661|WDR4|10785|WD repeat domain 4##AK298015|WDR4|10785|WD repeat domain 4##DQ892967|WDR4|10785|WD repeat domain 4##DQ896215|WDR4|10785|WD repeat domain 4##AK292923|WDR4|10785|WD repeat domain 4##AK315008|WDR4|10785|WD repeat domain 4##AJ243912|WDR4|10785|WD repeat domain 4##AJ243913|WDR4|10785|WD repeat domain 4##BC006341|WDR4|10785|WD repeat domain 4##AY142115|PKNOX1|5316|PBX/knotted 1 homeobox 1##AY196965|PKNOX1|5316|PBX/knotted 1 homeobox 1##NM_004571|PKNOX1|5316|PBX/knotted 1 homeobox 1##BC000735|PKNOX1|5316|PBX/knotted 1 homeobox 1##Y13613|PKNOX1|5316|PBX/knotted 1 homeobox 1##AK294794|PKNOX1|5316|PBX/knotted 1 homeobox 1##AK222892|PKNOX1|5316|PBX/knotted 1 homeobox 1##U68727|PKNOX1|5316|PBX/knotted 1 homeobox 1##BC000440|CBS|875|cystathionine-beta-synthase##X82166|CBS|875|cystathionine-beta-synthase##BC011381|CBS|875|cystathionine-beta-synthase##AK313691|CBS|875|cystathionine-beta-synthase##L14577|CBS|875|cystathionine-beta-synthase##BC010242|CBS|875|cystathionine-beta-synthase##NM_000071|CBS|875|cystathionine-beta-synthase	0.0	
chr2	45955811	45955991	reg1032352.p2	3.686	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-76827	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-117494	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-160773	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	568690	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	569074	+	NM_001145051	750802	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.0	
chr3	149320222	149320379	reg1032041.p1	3.686	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-127811	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-127898	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-224758	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	55435	-	AK022036 NM_001168278	100759	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	149939	-	AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2	0.0	
chr3	53080715	53080803	reg1035011.p1	3.686	+	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	-696	-	TSC_hg19_v1_chr3_-_53080023 BC014614 AF168132	-765	-	TSC_hg19_v1_chr3_-_53079286 NM_001005159	-1450	-	TSC_hg19_v1_chr3_-_53164452 AJ318099 BC043595 NM_052859	83692	-	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	114460	+	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	209252	-	AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1##BC014614|SFMBT1|51460|Scm-like with four mbt domains 1##AF168132|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005159|SFMBT1|51460|Scm-like with four mbt domains 1##AJ318099|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043595|RFT1|91869|RFT1 homolog (S. cerevisiae)##NM_052859|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase	0.0	
chr4	3287996	3288173	reg1030200.p1	3.686	+	AK126094 NM_001042690	-37318	+	L12392 TSC_hg19_v1_chr4_+_3076416 AB016794 NM_002111	-211757	+	TSC_hg19_v1_chr4_+_2965297 AK292390 AK223581 NM_001004056 NM_001004057 NM_182982 BC110825 BC027597 BC039732 BC117320 U33054 U33055 U33056 AK293569 X97879 X97880 X97881 X98118 HQ258463 X75897	-322549	+	TSC_hg19_v1_chr4_+_3294763 AK310999 BC028154	6676	+	AF030111 NM_002926 NM_198229	27789	+	TSC_hg19_v1_chr4_+_3318244 BC106944	30218	+	AK126094|C4orf44|345222|chromosome 4 open reading frame 44##NM_001042690|C4orf44|345222|chromosome 4 open reading frame 44##L12392|HTT|3064|huntingtin##AB016794|HTT|3064|huntingtin##NM_002111|HTT|3064|huntingtin##AK292390|GRK4|2868|G protein-coupled receptor kinase 4##AK223581|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004056|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004057|GRK4|2868|G protein-coupled receptor kinase 4##NM_182982|GRK4|2868|G protein-coupled receptor kinase 4##BC027597|GRK4|2868|G protein-coupled receptor kinase 4##BC117320|GRK4|2868|G protein-coupled receptor kinase 4##U33054|GRK4|2868|G protein-coupled receptor kinase 4##U33055|GRK4|2868|G protein-coupled receptor kinase 4##U33056|GRK4|2868|G protein-coupled receptor kinase 4##X97879|GRK4|2868|G protein-coupled receptor kinase 4##X97880|GRK4|2868|G protein-coupled receptor kinase 4##X97881|GRK4|2868|G protein-coupled receptor kinase 4##X98118|GRK4|2868|G protein-coupled receptor kinase 4##HQ258463|GRK4|2868|G protein-coupled receptor kinase 4##X75897|GRK4|2868|G protein-coupled receptor kinase 4##AK310999|RGS12|6002|regulator of G-protein signaling 12##BC028154|RGS12|6002|regulator of G-protein signaling 12##AF030111|RGS12|6002|regulator of G-protein signaling 12##NM_002926|RGS12|6002|regulator of G-protein signaling 12##NM_198229|RGS12|6002|regulator of G-protein signaling 12##BC106944|RGS12|6002|regulator of G-protein signaling 12	0.0	
chr1	112050421	112050582	reg1005421.p1	3.685	+	NM_000677 NM_020683	-3759	-	TSC_hg19_v1_chr1_+_112016601 BC017973 NM_174896	-33903	+	TSC_hg19_v1_chr1_+_111992132 X60221	-58347	+	BC041707 BC064411 NM_001081976	56078	-	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	111966	+	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	231454	-	NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##BC017973|C1orf162|128346|chromosome 1 open reading frame 162##NM_174896|C1orf162|128346|chromosome 1 open reading frame 162##X60221|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1##BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B	0.204937	CTCF.p2:-20:0.205
chr1	12107606	12107720	reg1028041.p2	3.685	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-28093	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-28129	+	FJ618905 NM_021933	-28365	+	M83554 NM_001243 BC136400 BC171762 S75768	15881	+	D86042 BC063482 NM_152942 BC073839 BC141804	78353	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	119398	+	AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr11	92903275	92903356	reg1030367.p1	3.685	+	BC069163 NM_005959 U25341 AY521019	-200476	+	NM_001008781	-818054	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-2918905	+	TSC_hg19_v1_chr11_-_92930978 CU690400	27672	-	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	27770	-	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	160528	+	BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B##NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67	0.951749	CTCF.p2:5:0.952
chr1	25622028	25622131	reg1044112.p1	3.685	+	AK297151 NM_001127691 NM_016124 X63094 BC139922 AF510069 AF510070 AF312679 Z97026 DQ451878 X63097 AB018966 AB018967 AB018968 AB018969 AB037270 AB046420 AB049754 AF037626 AF177938 AF187846 AJ704215 AM183924 AY449381 AY449382 AY449383 AY449384 AY449385 AY751491 AY751492 AY751493 AY751494 AY751495 AY751496 FR745438 FR745439 FR745440 FR745441 JF436967 L08429 S57971 S70174 S73913 S78509 S82449 EU557240 EU557241 EU661905 EU661906	-23087	+	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	-48106	-	BC065040 TSC_hg19_v1_chr1_-_25573922	-48156	-	TSC_hg19_v1_chr1_+_25664821 NM_014313 AK311092 AF087880 AL136627 AK299180 AK311355 AK312588 AY358650 AY071927 BC007341 BC066908 AF081282	42755	+	AB018644 AB018645 AB030388 AB049753 AF056965 AF177938 AM295498 AM295506 DQ178642 DQ266353 DQ266400 DQ322275 FR691748 FR691750 GU474431 GU563377 GU810838 HE572747 JF436968 S57967 X63096 X63095 AY603478 X63098 Z97026 BC075081 M34015 AF510065 AF510066 AF510067 AF510068 X54534 NM_020485 NM_138616 NM_138617 NM_138618 BC139905	125261	-	TSC_hg19_v1_chr1_+_25757387 AK311472 NM_018202 AY845015 BC007687 AK001609 AY845035 AY845036 BC032427 BC020801	135406	+	AK297151|RHD|6007|Rh blood group, D antigen##NM_001127691|RHD|6007|Rh blood group, D antigen##NM_016124|RHD|6007|Rh blood group, D antigen##X63094|RHD|6007|Rh blood group, D antigen##BC139922|RHD|6007|Rh blood group, D antigen##AF510069|RHD|6007|Rh blood group, D antigen##AF510070|RHD|6007|Rh blood group, D antigen##AF312679|RHD|6007|Rh blood group, D antigen##Z97026|RHD|6007|Rh blood group, D antigen##DQ451878|RHD|6007|Rh blood group, D antigen##X63097|RHD|6007|Rh blood group, D antigen##AB018966|RHD|6007|Rh blood group, D antigen##AB018967|RHD|6007|Rh blood group, D antigen##AB018968|RHD|6007|Rh blood group, D antigen##AB018969|RHD|6007|Rh blood group, D antigen##AB037270|RHD|6007|Rh blood group, D antigen##AB046420|RHD|6007|Rh blood group, D antigen##AB049754|RHD|6007|Rh blood group, D antigen##AF037626|RHD|6007|Rh blood group, D antigen##AF177938|RHD|6007|Rh blood group, D antigen##AF187846|RHD|6007|Rh blood group, D antigen##AJ704215|RHD|6007|Rh blood group, D antigen##AM183924|RHD|6007|Rh blood group, D antigen##AY449381|RHD|6007|Rh blood group, D antigen##AY449382|RHD|6007|Rh blood group, D antigen##AY449383|RHD|6007|Rh blood group, D antigen##AY449384|RHD|6007|Rh blood group, D antigen##AY449385|RHD|6007|Rh blood group, D antigen##AY751491|RHD|6007|Rh blood group, D antigen##AY751492|RHD|6007|Rh blood group, D antigen##AY751493|RHD|6007|Rh blood group, D antigen##AY751494|RHD|6007|Rh blood group, D antigen##AY751495|RHD|6007|Rh blood group, D antigen##AY751496|RHD|6007|Rh blood group, D antigen##FR745438|RHD|6007|Rh blood group, D antigen##FR745439|RHD|6007|Rh blood group, D antigen##FR745440|RHD|6007|Rh blood group, D antigen##FR745441|RHD|6007|Rh blood group, D antigen##L08429|RHD|6007|Rh blood group, D antigen##S57971|RHD|6007|Rh blood group, D antigen##S70174|RHD|6007|Rh blood group, D antigen##S73913|RHD|6007|Rh blood group, D antigen##S78509|RHD|6007|Rh blood group, D antigen##S82449|RHD|6007|Rh blood group, D antigen##EU557240|RHD|6007|Rh blood group, D antigen##EU557241|RHD|6007|Rh blood group, D antigen##EU661905|RHD|6007|Rh blood group, D antigen##EU661906|RHD|6007|Rh blood group, D antigen##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##NM_014313|TMEM50A|23585|transmembrane protein 50A##AK311092|TMEM50A|23585|transmembrane protein 50A##AF087880|TMEM50A|23585|transmembrane protein 50A##AL136627|TMEM50A|23585|transmembrane protein 50A##AK299180|TMEM50A|23585|transmembrane protein 50A##AK311355|TMEM50A|23585|transmembrane protein 50A##AK312588|TMEM50A|23585|transmembrane protein 50A##AY358650|TMEM50A|23585|transmembrane protein 50A##AY071927|TMEM50A|23585|transmembrane protein 50A##BC007341|TMEM50A|23585|transmembrane protein 50A##BC066908|TMEM50A|23585|transmembrane protein 50A##AF081282|TMEM50A|23585|transmembrane protein 50A##AB018644|RHCE|6006|Rh blood group, CcEe antigens##AB018645|RHCE|6006|Rh blood group, CcEe antigens##AB030388|RHCE|6006|Rh blood group, CcEe antigens##AB049753|RHCE|6006|Rh blood group, CcEe antigens##AF056965|RHCE|6006|Rh blood group, CcEe antigens##AF177938|RHD|6007|Rh blood group, D antigen##AM295498|RHCE|6006|Rh blood group, CcEe antigens##AM295506|RHCE|6006|Rh blood group, CcEe antigens##DQ178642|RHCE|6006|Rh blood group, CcEe antigens##DQ266353|RHCE|6006|Rh blood group, CcEe antigens##DQ266400|RHCE|6006|Rh blood group, CcEe antigens##DQ322275|RHCE|6006|Rh blood group, CcEe antigens##FR691748|RHCE|6006|Rh blood group, CcEe antigens##FR691750|RHCE|6006|Rh blood group, CcEe antigens##GU474431|RHCE|6006|Rh blood group, CcEe antigens##GU563377|RHCE|6006|Rh blood group, CcEe antigens##GU810838|RHCE|6006|Rh blood group, CcEe antigens##S57967|RHCE|6006|Rh blood group, CcEe antigens##X63096|RHCE|6006|Rh blood group, CcEe antigens##X63095|RHCE|6006|Rh blood group, CcEe antigens##AY603478|RHCE|6006|Rh blood group, CcEe antigens##X63098|RHCE|6006|Rh blood group, CcEe antigens##Z97026|RHD|6007|Rh blood group, D antigen##BC075081|RHCE|6006|Rh blood group, CcEe antigens##M34015|RHCE|6006|Rh blood group, CcEe antigens##AF510065|RHCE|6006|Rh blood group, CcEe antigens##AF510066|RHCE|6006|Rh blood group, CcEe antigens##AF510067|RHCE|6006|Rh blood group, CcEe antigens##AF510068|RHCE|6006|Rh blood group, CcEe antigens##X54534|RHCE|6006|Rh blood group, CcEe antigens##NM_020485|RHCE|6006|Rh blood group, CcEe antigens##NM_138616|RHCE|6006|Rh blood group, CcEe antigens##NM_138617|RHCE|6006|Rh blood group, CcEe antigens##NM_138618|RHCE|6006|Rh blood group, CcEe antigens##BC139905|RHCE|6006|Rh blood group, CcEe antigens##AK311472|TMEM57|55219|transmembrane protein 57##NM_018202|TMEM57|55219|transmembrane protein 57##AY845015|TMEM57|55219|transmembrane protein 57##BC007687|TMEM57|55219|transmembrane protein 57##AK001609|TMEM57|55219|transmembrane protein 57##AY845035|TMEM57|55219|transmembrane protein 57##AY845036|TMEM57|55219|transmembrane protein 57##BC032427|TMEM57|55219|transmembrane protein 57##BC020801|TMEM57|55219|transmembrane protein 57	0.480583	CTCF.p2:2:0.481
chr12	6552670	6552851	reg1042084.p1	3.685	+	TSC_hg19_v1_chr12_+_6493333 AK095418 BC026262 AK027080 L04270 NM_002342 AB527559 DQ891995 DQ895185 CU693188	-59388	+	AK304379 NM_001159575	-66238	-	NM_001038	-67856	-	AK315732 NM_001242 BC012160 M63928 DQ892296 EU176659 AB590221 CU680244	1386	+	NM_018009 TSC_hg19_v1_chr12_+_6561272 BC015017 AK223163 AK001005 AK002056 AK222956 AK098035 HQ258015	8534	+	TSC_hg19_v1_chr12_-_6579844 AF060538 BC023286 AK289498 AK296294 AK303137 AK309184 NM_014231 NM_016830 NM_199245	27054	-	AK095418|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##BC026262|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK027080|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##L04270|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##NM_002342|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ891995|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ895185|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK304379|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001159575|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001038|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##AK315732|CD27|939|CD27 molecule##NM_001242|CD27|939|CD27 molecule##BC012160|CD27|939|CD27 molecule##M63928|CD27|939|CD27 molecule##DQ892296|CD27|939|CD27 molecule##EU176659|CD27|939|CD27 molecule##NM_018009|TAPBPL|55080|TAP binding protein-like##BC015017|TAPBPL|55080|TAP binding protein-like##AK223163|TAPBPL|55080|TAP binding protein-like##AK001005|TAPBPL|55080|TAP binding protein-like##AK002056|TAPBPL|55080|TAP binding protein-like##AK222956|TAPBPL|55080|TAP binding protein-like##AK098035|TAPBPL|55080|TAP binding protein-like##HQ258015|TAPBPL|55080|TAP binding protein-like##AF060538|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC023286|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK289498|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK296294|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK303137|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK309184|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_014231|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_016830|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_199245|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)	0.0	
chr12	90103873	90104053	reg1030983.p4	3.685	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-418	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-1276	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-54112	-	BC026075 BC024183 BC027600 BC034491 NM_152638	1244988	-	U59111 TSC_hg19_v1_chr12_-_91398750	1294784	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	1294816	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.0	
chr1	3542335	3542435	reg1035370.p1	3.685	+	AK298343 TSC_hg19_v1_chr1_+_3541608 AK289919 BC019034	-776	+	TSC_hg19_v1_chr1_+_3541565 NM_182752 AK096427	-821	+	AB231860 NM_001409	-14327	-	CU678066 AB034912 AK000437 AK225525 BC002611 BC086311 TSC_hg19_v1_chr1_-_3566668 AK302397 NM_017818	24231	-	TSC_hg19_v1_chr1_+_3569108 BC117251 BC117253 NM_001204184 NM_001204185 NM_001204186 NM_001204187 NM_001204188 NM_005427 Y11416	26741	+	TSC_hg19_v1_chr1_+_3607235 AB055065 AB055066 AY040827 AY040828 AY040829 NM_001126240 NM_001126241 NM_001126242 NM_001204189 NM_001204190 NM_001204191 AK304177 AK304784	64873	+	AK298343|TPRG1L|127262|tumor protein p63 regulated 1-like##AK289919|TPRG1L|127262|tumor protein p63 regulated 1-like##BC019034|TPRG1L|127262|tumor protein p63 regulated 1-like##NM_182752|TPRG1L|127262|tumor protein p63 regulated 1-like##AK096427|TPRG1L|127262|tumor protein p63 regulated 1-like##AB231860|MEGF6|1953|multiple EGF-like-domains 6##NM_001409|MEGF6|1953|multiple EGF-like-domains 6##AB034912|WRAP73|49856|WD repeat containing, antisense to TP73##AK000437|WRAP73|49856|WD repeat containing, antisense to TP73##AK225525|WRAP73|49856|WD repeat containing, antisense to TP73##BC002611|WRAP73|49856|WD repeat containing, antisense to TP73##BC086311|WRAP73|49856|WD repeat containing, antisense to TP73##AK302397|WRAP73|49856|WD repeat containing, antisense to TP73##NM_017818|WRAP73|49856|WD repeat containing, antisense to TP73##BC117251|TP73|7161|tumor protein p73##BC117253|TP73|7161|tumor protein p73##NM_001204184|TP73|7161|tumor protein p73##NM_001204185|TP73|7161|tumor protein p73##NM_001204186|TP73|7161|tumor protein p73##NM_001204187|TP73|7161|tumor protein p73##NM_001204188|TP73|7161|tumor protein p73##NM_005427|TP73|7161|tumor protein p73##Y11416|TP73|7161|tumor protein p73##AB055065|TP73|7161|tumor protein p73##AB055066|TP73|7161|tumor protein p73##AY040827|TP73|7161|tumor protein p73##AY040828|TP73|7161|tumor protein p73##AY040829|TP73|7161|tumor protein p73##NM_001126240|TP73|7161|tumor protein p73##NM_001126241|TP73|7161|tumor protein p73##NM_001126242|TP73|7161|tumor protein p73##NM_001204189|TP73|7161|tumor protein p73##NM_001204190|TP73|7161|tumor protein p73##NM_001204191|TP73|7161|tumor protein p73##AK304177|TP73|7161|tumor protein p73##AK304784|TP73|7161|tumor protein p73	0.91527	CTCF.p2:-8:0.915
chr15	80988798	80988975	reg1038948.p1	3.685	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	-877	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	-1224	+	AK295763 TSC_hg19_v1_chr15_+_80733623	-255281	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	82835	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	293314	-	TSC_hg19_v1_chr15_+_81293344 NM_022566	304458	+	AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199##D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##NM_022566|MESDC1|59274|mesoderm development candidate 1	0.123171	
chr16	13535691	13535857	reg1030577.p2	3.685	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-540306	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-638055	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-638123	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	478257	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	629312	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	744744	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.0	
chr1	66902130	66902254	reg1036757.p1	3.685	+	TSC_hg19_v1_chr1_+_66798096 AK294441	-104097	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	-104339	+	AB209081 NM_001037340 AK290006	-443789	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	97692	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	315932	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	315973	+	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1	0.0	
chr18	46194169	46194285	reg1040541.p2	3.685	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-128454	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-258518	-	AM988836 AK296709 NM_001039360 EF120357	-530528	-	AK131394 NM_001190823	274920	-	AK301535 NM_001190822	281475	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	282540	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.0	
chr20	50114488	50114645	reg1033552.p2	3.685	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	-474909	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-539198	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-539503	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	44573	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	44709	-	EU887574 EU887577 NM_001136021	64601	-	BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.0	
chr3	113251280	113251461	reg1035184.p1	3.685	+	NM_017699	-153	+	AY099107 BC036951 TSC_hg19_v1_chr3_-_113234023 AK057966 AL832327 AL832148 NM_144718	-17377	-	TSC_hg19_v1_chr3_-_113233690 AK296160	-17684	-	TSC_hg19_v1_chr3_-_113415490 BC043383 NM_001009899	164042	-	AK296456 TSC_hg19_v1_chr3_-_113464788	213344	-	TSC_hg19_v1_chr3_-_113465043 CR749314 AK023090 AK307184 BC012731 AK311403 AK023256	213673	-	NM_017699|SIDT1|54847|SID1 transmembrane family, member 1##AY099107|SPICE1|152185|spindle and centriole associated protein 1##BC036951|SPICE1|152185|spindle and centriole associated protein 1##AK057966|SPICE1|152185|spindle and centriole associated protein 1##AL832327|SPICE1|152185|spindle and centriole associated protein 1##AL832148|SPICE1|152185|spindle and centriole associated protein 1##NM_144718|SPICE1|152185|spindle and centriole associated protein 1##AK296160|SPICE1|152185|spindle and centriole associated protein 1##BC043383|KIAA2018|205717|KIAA2018##NM_001009899|KIAA2018|205717|KIAA2018##AK296456|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##CR749314|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK023090|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK307184|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##BC012731|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit##AK023256|NAA50|80218|N(alpha)-acetyltransferase 50, NatE catalytic subunit	0.0	
chr5	124084028	124084193	reg1033375.p1	3.685	+	BC131507 AB033107 BC151226 NM_020747	-3322	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1236228	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1324966	-	NM_001146319 AK316288 AK300154	1611704	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1674733	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	1675077	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.0	
chr5	138941564	138941671	reg1027129.p2	3.685	+	TSC_hg19_v1_chr5_+_138941350 U39317 AB590980	-269	+	TSC_hg19_v1_chr5_+_138940966 AK001428 BC019052 AK001311 AY651263	-692	+	TSC_hg19_v1_chr5_+_138940760 BC033349 NM_003339 NM_181838 BC048426	-844	+	TSC_hg19_v1_chr5_+_139027874 AK024338	86257	+	TSC_hg19_v1_chr5_+_139027942 BC006428	86313	+	BC024040 BC041013 TSC_hg19_v1_chr5_+_139027968 BC050046 BC017439	86367	+	U39317|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001428|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC019052|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK001311|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AY651263|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC033349|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_003339|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##NM_181838|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##BC048426|UBE2D2|7322|ubiquitin-conjugating enzyme E2D 2##AK024338|CXXC5|51523|CXXC finger protein 5##BC006428|CXXC5|51523|CXXC finger protein 5##BC024040|CXXC5|51523|CXXC finger protein 5##BC041013|CXXC5|51523|CXXC finger protein 5##BC050046|CXXC5|51523|CXXC finger protein 5##BC017439|CXXC5|51523|CXXC finger protein 5	0.0	
chr6	23414465	23414620	reg1037778.p1	3.685	+	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	-844817	+	X54394 X54393 GQ305133 M58594 NM_001163558	-1111495	-	BC015850 NM_000948	-1116813	-	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	711888	+	AF181722 NM_181337	942588	+	AF181721 NM_016356	943737	-	NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1##AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2	0.625605	CTCF.p2:55:0.626
chrUn_gl000222	131696	131791	reg1039525.p1	3.685	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.39902	CTCF.p2:-11:0.399
chr1	156163779	156163856	reg1030545.p2	3.684	+	TSC_hg19_v1_chr1_+_156163725 NM_014655	-79	+	NM_001193300 NM_022367 AK296693 TSC_hg19_v1_chr1_+_156123375 AK091127 AK290353 AX746794 NM_001193302 AK315547 BX640891 BC020974	-40463	+	NM_001193301 AY358531	-44046	+	TSC_hg19_v1_chr1_+_156163907 AK074912 AK299747 AK307968 AK309678 AK309690 BC008843 AK075002 AK294524 AK293778	75	+	TSC_hg19_v1_chr1_+_156163911 AB007915 BC039854	101	+	TSC_hg19_v1_chr1_+_156182797 NM_001199653 NM_001199654 NM_001199661 NM_001199662 NM_001199663 NM_001199664 NM_007221 AK124646 AK307287 AK022523 AK289490 AK290260 AK310694 BC033656 BC065031 AB464036 CU688008 DQ890582 DQ893741 EU832507 EU832588 AL080101 BC056417 AF141310 BC050735	18977	+	NM_014655|SLC25A44|9673|solute carrier family 25, member 44##NM_001193300|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_022367|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK296693|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK091127|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK290353|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_001193302|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK315547|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##BX640891|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##BC020974|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##NM_001193301|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AY358531|SEMA4A|64218|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A##AK074912|SLC25A44|9673|solute carrier family 25, member 44##AK299747|SLC25A44|9673|solute carrier family 25, member 44##AK307968|SLC25A44|9673|solute carrier family 25, member 44##AK309678|SLC25A44|9673|solute carrier family 25, member 44##AK309690|SLC25A44|9673|solute carrier family 25, member 44##BC008843|SLC25A44|9673|solute carrier family 25, member 44##AK075002|SLC25A44|9673|solute carrier family 25, member 44##AK294524|SLC25A44|9673|solute carrier family 25, member 44##AB007915|SLC25A44|9673|solute carrier family 25, member 44##BC039854|SLC25A44|9673|solute carrier family 25, member 44##NM_001199653|PMF1|11243|polyamine-modulated factor 1##NM_001199654|PMF1|11243|polyamine-modulated factor 1##NM_001199661|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##NM_001199662|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##NM_001199663|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##NM_001199664|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##NM_007221|PMF1|11243|polyamine-modulated factor 1##AK124646|PMF1|11243|polyamine-modulated factor 1##AK307287|PMF1|11243|polyamine-modulated factor 1##AK022523|PMF1|11243|polyamine-modulated factor 1##AK289490|PMF1|11243|polyamine-modulated factor 1##AK290260|PMF1|11243|polyamine-modulated factor 1##AK310694|PMF1|11243|polyamine-modulated factor 1##BC033656|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##BC065031|PMF1|11243|polyamine-modulated factor 1##DQ890582|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##DQ893741|PMF1-BGLAP|100527963|PMF1-BGLAP readthrough##EU832507|PMF1|11243|polyamine-modulated factor 1##EU832588|PMF1|11243|polyamine-modulated factor 1##AL080101|PMF1|11243|polyamine-modulated factor 1##BC056417|PMF1|11243|polyamine-modulated factor 1##AF141310|PMF1|11243|polyamine-modulated factor 1##BC050735|PMF1|11243|polyamine-modulated factor 1	0.984618	CTCF.p2:37:0.873
chr1	203274263	203274392	reg1031835.p1	3.684	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-75512	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-118401	-	BC008568 TSC_hg19_v1_chr1_-_203155877 AK312911	-118439	-	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	362	+	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	43057	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	45882	-	U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC008568|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##AK312911|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.0	
chr1	203274651	203274775	reg1031835.p2	3.684	+	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	-24	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-75898	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-118787	-	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	42671	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	45496	-	AK172740 TSC_hg19_v1_chr1_-_203320256	45548	-	NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.0	
chr12	122354805	122354904	reg1039427.p2	3.684	+	TSC_hg19_v1_chr12_+_122326731 AB003177 NM_002813 AK315389 BC002383 BC004184 BC004213 DQ893594 EU831432 EU831524 AB528684	-28159	+	AK057510 NM_001171993	-28338	-	CU692906 DQ892664 DQ896049 BC024287 BC014790 X72389 TSC_hg19_v1_chr12_-_122296766 AK290826 NM_002150	-58161	-	TSC_hg19_v1_chr12_+_122356497 NM_001178003 NM_144668 BC028421 BC036233	1627	+	AK296159 TSC_hg19_v1_chr12_+_122459903 NM_001024808 NM_020993 AK316486 BC113627 BC094723 HQ258124 AB590498	105039	+	TSC_hg19_v1_chr12_+_122516655 BC151841 NM_014938	161753	+	NM_002813|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK315389|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC002383|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004184|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004213|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##DQ893594|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831432|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831524|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK057510|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_001171993|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_001178003|WDR66|144406|WD repeat domain 66##NM_144668|WDR66|144406|WD repeat domain 66##BC028421|WDR66|144406|WD repeat domain 66##BC036233|WDR66|144406|WD repeat domain 66##AK296159|BCL7A|605|B-cell CLL/lymphoma 7A##NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A##NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A##AK316486|BCL7A|605|B-cell CLL/lymphoma 7A##BC113627|BCL7A|605|B-cell CLL/lymphoma 7A##BC094723|BCL7A|605|B-cell CLL/lymphoma 7A##HQ258124|BCL7A|605|B-cell CLL/lymphoma 7A##BC151841|MLXIP|22877|MLX interacting protein##NM_014938|MLXIP|22877|MLX interacting protein	0.996656	CTCF.p2:0:0.997
chr12	50097546	50097644	reg1040155.p1	3.684	+	BC067364 NM_001031698	-73269	+	TSC_hg19_v1_chr12_+_50017344 AK123353 BC050398 AL834216 NM_012272	-80224	+	AM393365 AL136748 BC035621 AK302702 AK093242 AX748009 NM_032130	-98250	-	AB384661 TSC_hg19_v1_chr12_-_50101046	3415	-	TSC_hg19_v1_chr12_-_50101189 AK128195	3563	-	TSC_hg19_v1_chr12_-_50101206 AB095934 BC159100 NM_175736 NM_198900	3617	-	BC067364|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_001031698|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AK123353|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##BC050398|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AL834216|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_012272|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AM393365|FAM186B|84070|family with sequence similarity 186, member B##AL136748|FAM186B|84070|family with sequence similarity 186, member B##BC035621|FAM186B|84070|family with sequence similarity 186, member B##AK302702|FAM186B|84070|family with sequence similarity 186, member B##AK093242|FAM186B|84070|family with sequence similarity 186, member B##NM_032130|FAM186B|84070|family with sequence similarity 186, member B##AK128195|FMNL3|91010|formin-like 3##AB095934|FMNL3|91010|formin-like 3##BC159100|FMNL3|91010|formin-like 3##NM_175736|FMNL3|91010|formin-like 3##NM_198900|FMNL3|91010|formin-like 3	0.0	
chr12	7063133	7063286	reg1041537.p2	3.684	+	TSC_hg19_v1_chr12_+_7060554 AK309037 M74903 AF178946	-2607	+	TSC_hg19_v1_chr12_+_7060550 AK290421	-2661	+	AK223629 TSC_hg19_v1_chr12_+_7060538	-2671	+	TSC_hg19_v1_chr12_-_7079814 AB528395 DQ891808 EU176626 BC014766 BC013228 AF178980 AF150962	16512	-	TSC_hg19_v1_chr12_-_7079828 AK298217 AK301316 AF126021 NM_007273 BC110322 NM_001144831	16666	-	NM_006331 BC055314 TSC_hg19_v1_chr12_+_7080072 AK298207	16800	+	M74903|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AF178946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK290421|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK223629|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ891808|PHB2|11331|prohibitin 2##EU176626|PHB2|11331|prohibitin 2##BC014766|PHB2|11331|prohibitin 2##BC013228|PHB2|11331|prohibitin 2##AF178980|PHB2|11331|prohibitin 2##AF150962|PHB2|11331|prohibitin 2##AK298217|PHB2|11331|prohibitin 2##AK301316|PHB2|11331|prohibitin 2##AF126021|PHB2|11331|prohibitin 2##NM_007273|PHB2|11331|prohibitin 2##BC110322|PHB2|11331|prohibitin 2##NM_001144831|PHB2|11331|prohibitin 2##NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	0.0	
chr17	38095924	38096061	reg1041488.p1	3.684	+	TSC_hg19_v1_chr17_-_38083855 AF373101 BC071833 AX775843 AK075212 BC017087 AF395708 AF373102 AK074811 NM_139280	-12160	-	BC054042 BC050710 AF151043 BC000638 BC018837 TSC_hg19_v1_chr17_-_38078103	-17986	-	AK000409 AK296607 NM_001042471 NM_001165958 NM_001165959	-21120	-	NM_001195545	1734	+	AK096439 NM_178171 BC109197	23252	+	TSC_hg19_v1_chr17_+_38137059 AK054611 AK094206 AK293539 AK300973 NM_002809 BC001684 BC012302	41073	+	AF373101|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC071833|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AX775843|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK075212|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC017087|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF395708|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF373102|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK074811|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##NM_139280|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC054042|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC050710|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AF151043|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC000638|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##BC018837|ORMDL3|94103|ORM1-like 3 (S. cerevisiae)##AK000409|GSDMB|55876|gasdermin B##AK296607|GSDMB|55876|gasdermin B##NM_001042471|GSDMB|55876|gasdermin B##NM_001165958|GSDMB|55876|gasdermin B##NM_001165959|GSDMB|55876|gasdermin B##NM_001195545|LRRC3C|100505591|leucine rich repeat containing 3C##AK096439|GSDMA|284110|gasdermin A##NM_178171|GSDMA|284110|gasdermin A##BC109197|GSDMA|284110|gasdermin A##AK054611|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK094206|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK293539|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##AK300973|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##NM_002809|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3##BC012302|PSMD3|5709|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	0.095688	
chr2	231313021	231313112	reg1025592.p2	3.684	+	AK091898 NM_001206704	-31596	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-32110	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-32147	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	264480	+	TSC_hg19_v1_chr2_+_231577633 BC020570	264578	+	AK292382 NM_001130849 NM_001130850 AK315692	265212	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.0	
chr22	33664809	33664876	reg1035753.p1	3.684	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-210487	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-262116	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-467090	+	AJ007583 AB011181 NM_004737 NM_133642	651528	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1797307	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1988634	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr3	115641648	115641750	reg1032813.p1	3.684	+	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-299280	+	NM_001130064 NM_002045	-299549	+	TSC_hg19_v1_chr3_-_114866114 BC010934 BX647778 BX648237 NM_015642	-775585	-	AK315286 TSC_hg19_v1_chr3_-_116164338	522632	-	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	522674	-	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	3111834	-	AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##NM_001130064|GAP43|2596|growth associated protein 43##NM_002045|GAP43|2596|growth associated protein 43##BC010934|ZBTB20|26137|zinc finger and BTB domain containing 20##BX647778|ZBTB20|26137|zinc finger and BTB domain containing 20##BX648237|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_015642|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315286|LSAMP|4045|limbic system-associated membrane protein##BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11	0.746568	CTCF.p2:6:0.747
chr5	68485268	68485423	reg1034683.p1	3.684	+	BC048127 TSC_hg19_v1_chr5_-_68485309 AK130675 BC039391	-41	-	TSC_hg19_v1_chr5_+_68463001 BC006510 M25753 AB590575 DQ892975 BT020128	-22308	+	AK289431 TSC_hg19_v1_chr5_+_68462976	-22381	+	TSC_hg19_v1_chr5_+_68485409 NM_022909 AK290746 BC015355 BC012024 AK123761 AB035124 DQ894658 CU680168	69	+	TSC_hg19_v1_chr5_+_68513604 NM_033281 BC015966	28242	+	TSC_hg19_v1_chr5_+_68513632 BC017900 AF271777	28329	+	BC006510|CCNB1|891|cyclin B1##M25753|CCNB1|891|cyclin B1##DQ892975|CCNB1|891|cyclin B1##BT020128|CCNB1|891|cyclin B1##AK289431|CCNB1|891|cyclin B1##NM_022909|CENPH|64946|centromere protein H##AK290746|CENPH|64946|centromere protein H##BC015355|CENPH|64946|centromere protein H##BC012024|CENPH|64946|centromere protein H##AK123761|CENPH|64946|centromere protein H##AB035124|CENPH|64946|centromere protein H##DQ894658|CENPH|64946|centromere protein H##NM_033281|MRPS36|92259|mitochondrial ribosomal protein S36##BC015966|MRPS36|92259|mitochondrial ribosomal protein S36##BC017900|MRPS36|92259|mitochondrial ribosomal protein S36##AF271777|MRPS36|92259|mitochondrial ribosomal protein S36	0.0	
chr6	140896655	140896796	reg1043574.p1	3.684	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-1200941	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-1200964	-	NM_001168389 NM_001168388	-1201302	-	BC095542 GU727635 M73482 NM_002511	1513139	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	1571665	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	1571681	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.0	
chr8	38356106	38356216	reg1042115.p2	3.684	+	FJ809916 FJ809917 NM_001174063 NM_001174064 NM_015850 NM_023105 NM_023106 NM_023110	-29810	-	BC018128 TSC_hg19_v1_chr8_-_38326154 M60485 X66945 AB208919 BC015035 AK222718 AK223126	-30010	-	M34187 M34188 M34186 TSC_hg19_v1_chr8_-_38326072	-30213	-	BC137511 BC137512 BC139744 AK125570 NM_207412	30015	-	BX647696 NM_001146216	229542	+	AY072874 AY072875 TSC_hg19_v1_chr8_+_38614814 AK308849	258625	+	FJ809916|FGFR1|2260|fibroblast growth factor receptor 1##FJ809917|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174063|FGFR1|2260|fibroblast growth factor receptor 1##NM_001174064|FGFR1|2260|fibroblast growth factor receptor 1##NM_015850|FGFR1|2260|fibroblast growth factor receptor 1##NM_023105|FGFR1|2260|fibroblast growth factor receptor 1##NM_023106|FGFR1|2260|fibroblast growth factor receptor 1##NM_023110|FGFR1|2260|fibroblast growth factor receptor 1##BC018128|FGFR1|2260|fibroblast growth factor receptor 1##M60485|FGFR1|2260|fibroblast growth factor receptor 1##X66945|FGFR1|2260|fibroblast growth factor receptor 1##AB208919|FGFR1|2260|fibroblast growth factor receptor 1##BC015035|FGFR1|2260|fibroblast growth factor receptor 1##AK222718|FGFR1|2260|fibroblast growth factor receptor 1##AK223126|FGFR1|2260|fibroblast growth factor receptor 1##M34187|FGFR1|2260|fibroblast growth factor receptor 1##M34188|FGFR1|2260|fibroblast growth factor receptor 1##M34186|FGFR1|2260|fibroblast growth factor receptor 1##BC137511|C8orf86|389649|chromosome 8 open reading frame 86##BC137512|C8orf86|389649|chromosome 8 open reading frame 86##BC139744|C8orf86|389649|chromosome 8 open reading frame 86##AK125570|C8orf86|389649|chromosome 8 open reading frame 86##NM_207412|C8orf86|389649|chromosome 8 open reading frame 86##BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072874|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072875|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK308849|TACC1|6867|transforming, acidic coiled-coil containing protein 1	0.0	
chr9	133894175	133894257	reg1036351.p1	3.684	+	AF041835 NM_006059 TSC_hg19_v1_chr9_+_133884573 AK075536	-9666	+	AK300287 NM_001145106 TSC_hg19_v1_chr9_-_133814549	-79725	-	BC032953 NM_032843 TSC_hg19_v1_chr9_-_133814253	-79972	-	NM_001185095 NM_001185096 NM_031426 TSC_hg19_v1_chr9_+_133971890	77662	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	77742	+	TSC_hg19_v1_chr9_+_134000975 BC105998 AK307573 NM_005085 AL832609 X64228 BC045620 BC012500	106758	+	AF041835|LAMC3|10319|laminin, gamma 3##NM_006059|LAMC3|10319|laminin, gamma 3##AK075536|LAMC3|10319|laminin, gamma 3##AK300287|FIBCD1|84929|fibrinogen C domain containing 1##NM_001145106|FIBCD1|84929|fibrinogen C domain containing 1##BC032953|FIBCD1|84929|fibrinogen C domain containing 1##NM_032843|FIBCD1|84929|fibrinogen C domain containing 1##NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like##NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like##NM_031426|AIF1L|83543|allograft inflammatory factor 1-like##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like##BC105998|NUP214|8021|nucleoporin 214kDa##AK307573|NUP214|8021|nucleoporin 214kDa##NM_005085|NUP214|8021|nucleoporin 214kDa##AL832609|NUP214|8021|nucleoporin 214kDa##X64228|NUP214|8021|nucleoporin 214kDa##BC045620|NUP214|8021|nucleoporin 214kDa##BC012500|NUP214|8021|nucleoporin 214kDa	0.50429	CTCF.p2:-15:0.504
chrX	65948673	65948763	reg1020569.p1	3.684	+	AK314881 NM_001199687	-89595	-	BC034919 AK296264 AK299018 NM_021783	-89832	-	AX775690 AX775692 AF298812 AX775694 AY152724 CU689984 AB528008 AY358735 AY358736 NM_001242310	-112860	-	TSC_hg19_v1_chrX_+_66763874 NM_000044	815157	+	TSC_hg19_v1_chrX_+_66766350 M20260	817653	+	NM_001011645	839964	+	AK314881|EDA2R|60401|ectodysplasin A2 receptor##NM_001199687|EDA2R|60401|ectodysplasin A2 receptor##BC034919|EDA2R|60401|ectodysplasin A2 receptor##AK296264|EDA2R|60401|ectodysplasin A2 receptor##AK299018|EDA2R|60401|ectodysplasin A2 receptor##NM_021783|EDA2R|60401|ectodysplasin A2 receptor##AF298812|EDA2R|60401|ectodysplasin A2 receptor##AY152724|EDA2R|60401|ectodysplasin A2 receptor##AY358735|EDA2R|60401|ectodysplasin A2 receptor##AY358736|EDA2R|60401|ectodysplasin A2 receptor##NM_001242310|EDA2R|60401|ectodysplasin A2 receptor##NM_000044|AR|367|androgen receptor##M20260|AR|367|androgen receptor##NM_001011645|AR|367|androgen receptor	0.113256	
chr10	76771155	76771315	reg1025721.p1	3.683	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-184881	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-834648	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-834705	+	AY686755 NM_001003892 BC137321 BC137322	47070	-	AB027004 AB103375 NM_016364	88012	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	97679	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr1	11028740	11028921	reg1031873.p2	3.683	+	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	-172125	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	-274279	-	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-493819	+	NM_001170754	13263	-	NM_007375 TSC_hg19_v1_chr1_+_11072715 AK299454 AK312416 BC001487 BC095435 BC071657 AL050265 AK222754 AK295920	43880	+	Y18282 TSC_hg19_v1_chr1_-_11107270 Y18283 X98400 Y09926 BC052299 BC067359 BC080556 Y18281 Y18284 AB008047	78389	-	DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127##NM_007375|TARDBP|23435|TAR DNA binding protein##AK299454|TARDBP|23435|TAR DNA binding protein##AK312416|TARDBP|23435|TAR DNA binding protein##BC001487|TARDBP|23435|TAR DNA binding protein##BC095435|TARDBP|23435|TAR DNA binding protein##BC071657|TARDBP|23435|TAR DNA binding protein##AL050265|TARDBP|23435|TAR DNA binding protein##AK222754|TARDBP|23435|TAR DNA binding protein##AK295920|TARDBP|23435|TAR DNA binding protein##Y18282|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18283|MASP2|10747|mannan-binding lectin serine peptidase 2##X98400|MASP2|10747|mannan-binding lectin serine peptidase 2##Y09926|MASP2|10747|mannan-binding lectin serine peptidase 2##BC052299|MASP2|10747|mannan-binding lectin serine peptidase 2##BC067359|MASP2|10747|mannan-binding lectin serine peptidase 2##BC080556|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18281|MASP2|10747|mannan-binding lectin serine peptidase 2##Y18284|MASP2|10747|mannan-binding lectin serine peptidase 2##AB008047|MASP2|10747|mannan-binding lectin serine peptidase 2	0.0	
chr11	18761358	18761539	reg1034748.p2	3.683	+	BC115396 BC115397 AK095113 NM_173588	-13701	-	TSC_hg19_v1_chr11_+_18720347 BC035692 NM_153347	-41100	+	TSC_hg19_v1_chr11_+_18720321 AK074600	-41145	+	AK294374 BC064807 AK316270 AK294673 BC039897 AK295604 AK090923 AX746685 AL832541 NM_001039970 NM_006906 NM_032781 TSC_hg19_v1_chr11_-_18813404	51817	-	BC096835 NM_147199	195098	-	BC063450 NM_054030	320779	-	BC115396|IGSF22|283284|immunoglobulin superfamily, member 22##BC115397|IGSF22|283284|immunoglobulin superfamily, member 22##AK095113|IGSF22|283284|immunoglobulin superfamily, member 22##NM_173588|IGSF22|283284|immunoglobulin superfamily, member 22##BC035692|TMEM86A|144110|transmembrane protein 86A##NM_153347|TMEM86A|144110|transmembrane protein 86A##AK074600|TMEM86A|144110|transmembrane protein 86A##AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC096835|MRGPRX1|259249|MAS-related GPR, member X1##NM_147199|MRGPRX1|259249|MAS-related GPR, member X1##BC063450|MRGPRX2|117194|MAS-related GPR, member X2##NM_054030|MRGPRX2|117194|MAS-related GPR, member X2	0.673225	CTCF.p2:-23:0.673
chr1	163505760	163505859	reg1038418.p1	3.683	+	NM_031423 NM_145697 TSC_hg19_v1_chr1_+_163291746 AK093348 AX748068 AF326731 BC008489 AB050577	-214033	+	TSC_hg19_v1_chr1_-_163291574 BC032239	-214248	-	TSC_hg19_v1_chr1_-_163172866 NM_003617	-332897	-	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	1022782	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	1023177	+	TSC_hg19_v1_chr1_+_164818083 AK022520	1312314	+	NM_031423|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_145697|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK093348|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AF326731|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC008489|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AB050577|NUF2|83540|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_003617|RGS5|8490|regulator of G-protein signaling 5##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1	0.915102	CTCF.p2:-18:0.915
chr12	14519026	14519206	reg1021453.p2	3.683	+	TSC_hg19_v1_chr12_+_14518615 AK299320 AK025060 NM_018179 BC063855 BC053625	-481	+	BC113618 BC113620 NM_000834 U88963 U90278 U11287	-386130	-	TSC_hg19_v1_chr12_+_13349720 AK312246 Z50751	-1169387	+	TSC_hg19_v1_chr12_+_14538267 AK308062 AK304184 BX648096	19156	+	AK026315 AK225458 AK290914 BC063561 TSC_hg19_v1_chr12_-_14720666	201493	-	NM_024829 TSC_hg19_v1_chr12_-_14720806	201688	-	AK299320|ATF7IP|55729|activating transcription factor 7 interacting protein##AK025060|ATF7IP|55729|activating transcription factor 7 interacting protein##NM_018179|ATF7IP|55729|activating transcription factor 7 interacting protein##BC063855|ATF7IP|55729|activating transcription factor 7 interacting protein##BC053625|ATF7IP|55729|activating transcription factor 7 interacting protein##BC113618|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##BC113620|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##NM_000834|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U88963|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U90278|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##U11287|GRIN2B|2904|glutamate receptor, ionotropic, N-methyl D-aspartate 2B##AK312246|EMP1|2012|epithelial membrane protein 1##Z50751|EMP1|2012|epithelial membrane protein 1##AK304184|ATF7IP|55729|activating transcription factor 7 interacting protein##BX648096|ATF7IP|55729|activating transcription factor 7 interacting protein##AK026315|PLBD1|79887|phospholipase B domain containing 1##AK225458|PLBD1|79887|phospholipase B domain containing 1##AK290914|PLBD1|79887|phospholipase B domain containing 1##BC063561|PLBD1|79887|phospholipase B domain containing 1##NM_024829|PLBD1|79887|phospholipase B domain containing 1	0.0	
chr1	42261159	42261293	reg1041749.p1	3.683	+	BC034393 X55177 M65199 NM_001956	-310907	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-553390	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-553441	-	TSC_hg19_v1_chr1_-_42384357 BC040942	123116	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	123147	-	TSC_hg19_v1_chr1_-_42501606 BC046120	240403	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.742074	CTCF.p2:19:0.742
chr15	74676382	74676552	reg1019287.p2	3.683	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-16464	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-17932	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-65562	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	49562	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	49845	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	76980	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.0	
chr17	78904115	78904259	reg1033003.p2	3.683	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-385369	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-385538	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-453860	-	TSC_hg19_v1_chr17_+_78935064 BC073898	30945	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	61454	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	61507	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.0	
chr2	241976678	241976748	reg1028773.p2	3.683	+	NM_001080437	-38459	+	AK056601 NM_001085437	-141141	-	BC125154 BC125155 AK026324 NM_024861 AK096434	-145294	-	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	65013	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	112158	-	AK308015 BC051689 TSC_hg19_v1_chr2_+_242089094	112345	+	NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54##BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase##AK308015|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC051689|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7	0.15452	
chr3	133657649	133657763	reg1038809.p1	3.683	+	AK025826 AK225383 BC051274 BC064502 BC082257 NM_025041	-9120	-	TSC_hg19_v1_chr3_-_133614642 BC078662 AK312378 AF166492 BC002510 NM_016577	-43124	-	AK295451 AF498940 BT007263 AB385529 EU832725 TSC_hg19_v1_chr3_-_133614324	-43396	-	U70867 BC041140 AK303550 AK309561 TSC_hg19_v1_chr3_-_133748770	91044	-	BC051347 TSC_hg19_v1_chr3_-_133748836 NM_005630	91167	-	TSC_hg19_v1_chr3_-_133969397 AB527382	311758	-	AK025826|C3orf36|80111|chromosome 3 open reading frame 36##AK225383|C3orf36|80111|chromosome 3 open reading frame 36##BC051274|C3orf36|80111|chromosome 3 open reading frame 36##BC064502|C3orf36|80111|chromosome 3 open reading frame 36##BC082257|C3orf36|80111|chromosome 3 open reading frame 36##NM_025041|C3orf36|80111|chromosome 3 open reading frame 36##BC078662|RAB6B|51560|RAB6B, member RAS oncogene family##AK312378|RAB6B|51560|RAB6B, member RAS oncogene family##AF166492|RAB6B|51560|RAB6B, member RAS oncogene family##BC002510|RAB6B|51560|RAB6B, member RAS oncogene family##NM_016577|RAB6B|51560|RAB6B, member RAS oncogene family##AK295451|RAB6B|51560|RAB6B, member RAS oncogene family##AF498940|RAB6B|51560|RAB6B, member RAS oncogene family##BT007263|RAB6B|51560|RAB6B, member RAS oncogene family##EU832725|RAB6B|51560|RAB6B, member RAS oncogene family##U70867|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##BC041140|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK303550|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK309561|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##BC051347|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##NM_005630|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1	0.010764	
chr4	38130797	38130978	reg1024747.p2	3.683	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-151870	+	AF095288 BC069114 BC069400 NM_006607	-168832	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-238098	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	534939	+	AF289565 TSC_hg19_v1_chr4_-_38666549	535602	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	653712	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr4	40993916	40994023	reg1039600.p1	3.683	+	BC088372 TSC_hg19_v1_chr4_-_40936716	-57291	-	TSC_hg19_v1_chr4_-_40859162 AK299800 NM_001166051 NM_001166052 NM_001166053 NM_001166054	-134794	-	BC042401 NM_024677 BC036568 AK024063	-242023	+	TSC_hg19_v1_chr4_-_41216560 BC027946 AK304247 AK226179 NM_001166050 NM_004307 NM_173075	222600	-	TSC_hg19_v1_chr4_+_41258897 NM_004181	264927	+	TSC_hg19_v1_chr4_+_41258913 BC000332 BC018838	264949	+	BC088372|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK299800|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166051|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166052|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166053|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166054|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##BC042401|NSUN7|79730|NOP2/Sun domain family, member 7##NM_024677|NSUN7|79730|NOP2/Sun domain family, member 7##BC036568|NSUN7|79730|NOP2/Sun domain family, member 7##AK024063|NSUN7|79730|NOP2/Sun domain family, member 7##BC027946|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK304247|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##AK226179|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_001166050|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004307|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_173075|APBB2|323|amyloid beta (A4) precursor protein-binding, family B, member 2##NM_004181|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC000332|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)##BC018838|UCHL1|7345|ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase)	0.0	
chr5	142418592	142418710	reg1036399.p1	3.683	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-268343	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-268679	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-341080	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	364172	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	364455	-	BC015610 TSC_hg19_v1_chr5_-_142783214	364560	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr9	37371017	37371197	reg1035864.p1	3.683	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-250524	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-250599	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-250621	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	51599	+	BC010007 TSC_hg19_v1_chr9_-_37465267	94153	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	94288	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.060904	
chrX	30883303	30883429	reg1039515.p1	3.683	+	TSC_hg19_v1_chrX_+_30671612 L13943 AK294938 AK294304 BX647604 AK308238 BC037549 CU688226 DQ891580 DQ894773	-211738	+	TSC_hg19_v1_chrX_+_30671539 AK313215	-211824	+	TSC_hg19_v1_chrX_+_30671493 BC042421 BC071595 NM_000167 NM_001128127 NM_001205019 NM_203391	-211872	+	TSC_hg19_v1_chrX_-_30907408 AK297274 NM_152787	24093	-	BC069538 BC100768 BC100769 BC100770 BC069069 AF285592 NM_031894	206797	-	CU688550 M92650 TSC_hg19_v1_chrX_-_31285072 BC070078 NM_004015 NM_004016 NM_004017 NM_004018 NM_004019 S42206 BC094758 AK299936 BC028720 S38776	401668	-	L13943|GK|2710|glycerol kinase##AK294938|GK|2710|glycerol kinase##AK294304|GK|2710|glycerol kinase##BX647604|GK|2710|glycerol kinase##AK308238|GK|2710|glycerol kinase##BC037549|GK|2710|glycerol kinase##DQ891580|GK|2710|glycerol kinase##DQ894773|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase##BC042421|GK|2710|glycerol kinase##BC071595|GK|2710|glycerol kinase##NM_000167|GK|2710|glycerol kinase##NM_001128127|GK|2710|glycerol kinase##NM_001205019|GK|2710|glycerol kinase##NM_203391|GK|2710|glycerol kinase##AK297274|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##NM_152787|TAB3|257397|TGF-beta activated kinase 1/MAP3K7 binding protein 3##BC069538|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100768|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100769|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC100770|FTHL17|53940|ferritin, heavy polypeptide-like 17##BC069069|FTHL17|53940|ferritin, heavy polypeptide-like 17##AF285592|FTHL17|53940|ferritin, heavy polypeptide-like 17##NM_031894|FTHL17|53940|ferritin, heavy polypeptide-like 17##M92650|DMD|1756|dystrophin##BC070078|DMD|1756|dystrophin##NM_004015|DMD|1756|dystrophin##NM_004016|DMD|1756|dystrophin##NM_004017|DMD|1756|dystrophin##NM_004018|DMD|1756|dystrophin##NM_004019|DMD|1756|dystrophin##S42206|DMD|1756|dystrophin##BC094758|DMD|1756|dystrophin##AK299936|DMD|1756|dystrophin##BC028720|DMD|1756|dystrophin##S38776|DMD|1756|dystrophin	0.774784	CTCF.p2:-14:0.775
chr1	112199047	112199123	reg1012432.p1	3.682	+	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	-36618	+	BC041707 BC064411 NM_001081976	-92506	-	NM_000677 NM_020683	-152343	-	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	82870	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	99134	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	99350	-	NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B	0.0	
chr11	722080	722176	reg1031179.p1	3.682	+	TSC_hg19_v1_chr11_+_706613 BC080636	-15503	+	TSC_hg19_v1_chr11_+_706230 NM_022772 AK025588 AK025824 AK225311 AK294041 AK222903	-15959	+	NM_001042463 NM_174940 BC008671 TSC_hg19_v1_chr11_+_695815 AK302585 AK124309	-26406	+	AK027765 TSC_hg19_v1_chr11_+_722322	174	+	TSC_hg19_v1_chr11_+_747426 BC010103 BC009680	25297	+	TSC_hg19_v1_chr11_+_747430 L19437 NM_006755	25306	+	BC080636|EPS8L2|64787|EPS8-like 2##NM_022772|EPS8L2|64787|EPS8-like 2##AK025588|EPS8L2|64787|EPS8-like 2##AK025824|EPS8L2|64787|EPS8-like 2##AK225311|EPS8L2|64787|EPS8-like 2##AK294041|EPS8L2|64787|EPS8-like 2##AK222903|EPS8L2|64787|EPS8-like 2##NM_001042463|TMEM80|283232|transmembrane protein 80##NM_174940|TMEM80|283232|transmembrane protein 80##BC008671|TMEM80|283232|transmembrane protein 80##AK302585|TMEM80|283232|transmembrane protein 80##AK124309|TMEM80|283232|transmembrane protein 80##AK027765|EPS8L2|64787|EPS8-like 2##BC010103|TALDO1|6888|transaldolase 1##BC009680|TALDO1|6888|transaldolase 1##L19437|TALDO1|6888|transaldolase 1##NM_006755|TALDO1|6888|transaldolase 1	0.0	
chr13	67066729	67066883	reg1035385.p1	3.682	+	AK289924 NM_022843	-5077152	-	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	-5077553	-	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	-6095327	+	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	737698	-	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	3615735	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	5373453	-	AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)	0.941872	CTCF.p2:-7:0.942
chr14	103032078	103032167	reg1032890.p2	3.682	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-56008	-	AK291868 TSC_hg19_v1_chr14_-_102976070	-56089	-	TSC_hg19_v1_chr14_+_102829428 BC030791 AK296395 AK299690 BC142667 BC142715 AK127721	-202697	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	26876	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	27039	+	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	211697	+	BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##AK291868|ANKRD9|122416|ankyrin repeat domain 9##BC030791|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK296395|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK299690|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142667|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142715|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK127721|TECPR2|9895|tectonin beta-propeller repeat containing 2##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##AF155595|RCOR1|23186|REST corepressor 1##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3	0.31494	CTCF.p2:-5:0.315
chr15	41694670	41694764	reg1040446.p2	3.682	+	AF151823 BC000780 NM_016013 AK310033 AK310983 AK309889 TSC_hg19_v1_chr15_-_41694659	-55	-	CU680432 AF305711 TSC_hg19_v1_chr15_+_41625177	-69552	+	AK307728 AK222819 AK290879 AK293168 BC011008 AF217513 TSC_hg19_v1_chr15_+_41625080 AK225703 AL833611 AK023483 BC024772 AF090915 AF290612 BC001308 BC012887	-69636	+	TSC_hg19_v1_chr15_+_41709329 NM_015138 AK292302 D87440 BC015052 AB383821	14643	+	NM_002220 TSC_hg19_v1_chr15_+_41786071 BC026331 X54938 AB463780	91373	+	BC143903 D16105 AK314006 BC045607 X60702 AK296892 NM_001135685 NM_002344 NM_206961	111321	-	AF151823|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##BC000780|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##NM_016013|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK310033|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK310983|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AK309889|NDUFAF1|51103|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1##AF305711|NUSAP1|51203|nucleolar and spindle associated protein 1##AK307728|NUSAP1|51203|nucleolar and spindle associated protein 1##AK222819|NUSAP1|51203|nucleolar and spindle associated protein 1##AK290879|NUSAP1|51203|nucleolar and spindle associated protein 1##AK293168|NUSAP1|51203|nucleolar and spindle associated protein 1##BC011008|NUSAP1|51203|nucleolar and spindle associated protein 1##AF217513|NUSAP1|51203|nucleolar and spindle associated protein 1##AK225703|NUSAP1|51203|nucleolar and spindle associated protein 1##AL833611|NUSAP1|51203|nucleolar and spindle associated protein 1##AK023483|NUSAP1|51203|nucleolar and spindle associated protein 1##BC024772|NUSAP1|51203|nucleolar and spindle associated protein 1##AF090915|NUSAP1|51203|nucleolar and spindle associated protein 1##AF290612|NUSAP1|51203|nucleolar and spindle associated protein 1##BC001308|NUSAP1|51203|nucleolar and spindle associated protein 1##BC012887|NUSAP1|51203|nucleolar and spindle associated protein 1##NM_015138|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK292302|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##D87440|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC015052|RTF1|23168|Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##NM_002220|ITPKA|3706|inositol-trisphosphate 3-kinase A##BC026331|ITPKA|3706|inositol-trisphosphate 3-kinase A##X54938|ITPKA|3706|inositol-trisphosphate 3-kinase A##BC143903|LTK|4058|leukocyte receptor tyrosine kinase##D16105|LTK|4058|leukocyte receptor tyrosine kinase##AK314006|LTK|4058|leukocyte receptor tyrosine kinase##BC045607|LTK|4058|leukocyte receptor tyrosine kinase##X60702|LTK|4058|leukocyte receptor tyrosine kinase##AK296892|LTK|4058|leukocyte receptor tyrosine kinase##NM_001135685|LTK|4058|leukocyte receptor tyrosine kinase##NM_002344|LTK|4058|leukocyte receptor tyrosine kinase##NM_206961|LTK|4058|leukocyte receptor tyrosine kinase	0.0	
chr19	36421076	36421183	reg1037003.p1	3.682	+	TSC_hg19_v1_chr19_-_36399212 NM_001173514 NM_001173515 NM_003332 NM_198125	-21916	-	TSC_hg19_v1_chr19_-_36399198 AF019562 BC011175 AK290385	-21937	-	TSC_hg19_v1_chr19_-_36399181 BT009851 CR450342 CR542202 AB590208 AY074782 CU679890 DQ891092 DQ894274 AJ010098	-21979	-	BC003578 NM_024509	6892	+	TSC_hg19_v1_chr19_+_36486091 NM_001042631 BC007205 BC064605 BC069054 BC137516 BC137517	64965	+	CU690916 AK093764 AX748293 NM_001039876 BC052573 BC038360	78509	-	NM_001173514|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_001173515|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_003332|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_198125|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AF019562|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BC011175|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AK290385|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BT009851|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR450342|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR542202|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AY074782|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ891092|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ894274|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AJ010098|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BC003578|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_024509|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_001042631|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC007205|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC064605|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC069054|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137516|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137517|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##AK093764|C19orf46|163183|chromosome 19 open reading frame 46##NM_001039876|C19orf46|163183|chromosome 19 open reading frame 46##BC052573|C19orf46|163183|chromosome 19 open reading frame 46##BC038360|C19orf46|163183|chromosome 19 open reading frame 46	0.051539	
chr20	46777851	46777937	reg1031772.p2	3.682	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-362576	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-363142	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-647210	+	AB037836 TSC_hg19_v1_chr20_-_47444291	666392	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	666545	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	760424	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.109408	
chr21	15678996	15679081	reg1033017.p1	3.682	+	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-90541	+	AB463838 AY197607 NM_198996	-99790	-	TSC_hg19_v1_chr21_+_15399763 BC070147 BC024173 BC048201	-279274	+	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	76435	-	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	239611	-	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	758179	-	NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AY197607|LIPI|149998|lipase, member I##NM_198996|LIPI|149998|lipase, member I##AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1	0.390705	CTCF.p2:-25:0.391
chr2	74229375	74229471	reg1035008.p1	3.682	+	TSC_hg19_v1_chr2_+_74154019 X97386	-75377	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-75423	+	TSC_hg19_v1_chr2_+_74153968 NM_080916 NM_080918	-75473	+	NM_144993	44026	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	145595	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	145797	+	X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##NM_080916|DGUOK|1716|deoxyguanosine kinase##NM_080918|DGUOK|1716|deoxyguanosine kinase##NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.0	
chr5	111741411	111741519	reg1039286.p1	3.682	+	TSC_hg19_v1_chr5_+_111496560 AB002437	-244896	+	AK298779 NM_001142474 NM_001142475	-428891	-	NM_001142477 TSC_hg19_v1_chr5_-_111093886 NM_001142476	-647612	-	AB030240 BC114942 BC114632 TSC_hg19_v1_chr5_-_111754966 BC031042 NM_022140	13408	-	TSC_hg19_v1_chr5_+_112043199 NM_001127511 AK294544	301746	+	NM_000038 NM_001127510 TSC_hg19_v1_chr5_+_112073584 BC034955 BC056268 AB210001	332108	+	AB002437|EPB41L4A-AS1|114915|EPB41L4A antisense RNA 1 (non-protein coding)##AK298779|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142474|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142475|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142477|C5orf13|9315|chromosome 5 open reading frame 13##NM_001142476|C5orf13|9315|chromosome 5 open reading frame 13##AB030240|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114942|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC114632|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##BC031042|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_022140|EPB41L4A|64097|erythrocyte membrane protein band 4.1 like 4A##NM_001127511|APC|324|adenomatous polyposis coli##AK294544|APC|324|adenomatous polyposis coli##NM_000038|APC|324|adenomatous polyposis coli##NM_001127510|APC|324|adenomatous polyposis coli##BC034955|APC|324|adenomatous polyposis coli##BC056268|APC|324|adenomatous polyposis coli##AB210001|APC|324|adenomatous polyposis coli	0.0	
chr5	81652896	81653031	reg1032373.p2	3.682	+	BC093982 BC112191 NM_001017971	-51798	+	TSC_hg19_v1_chr5_-_81574219 NM_001025	-78744	-	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	-78792	-	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	720234	-	TSC_hg19_v1_chr5_-_82373255 NM_174909	720299	-	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	720420	+	BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001025|RPS23|6228|ribosomal protein S23##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##NM_174909|TMEM167A|153339|transmembrane protein 167A##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4	0.0	
chr5	95091334	95091515	reg1037419.p2	3.682	+	TSC_hg19_v1_chr5_+_95067531 CU691986 AB385392	-23888	+	TSC_hg19_v1_chr5_+_95067066 BC047884 NM_014899 BC020231 BC013169 BC041337 AB020685 AK290034	-24556	+	AY027526 AK292338 AK310260 BC047333 AK093225 AX747999 BC032832 NM_031952	-72738	-	AF162769 BT006689 CR450312 CR542165 DQ892497 DQ895709 CU679866 D21238 AF069668 BC106075 X76648 TSC_hg19_v1_chr5_-_95158431 AK311868 BC005304 BC010965	66976	-	TSC_hg19_v1_chr5_-_95158468 NM_001118890 NM_001243658 NM_001243659 NM_002064	67096	-	AB527661 DQ891536 DQ894725 TSC_hg19_v1_chr5_-_95297556 AK297956 AK296870	206074	-	BC047884|RHOBTB3|22836|Rho-related BTB domain containing 3##NM_014899|RHOBTB3|22836|Rho-related BTB domain containing 3##BC020231|RHOBTB3|22836|Rho-related BTB domain containing 3##BC013169|RHOBTB3|22836|Rho-related BTB domain containing 3##BC041337|RHOBTB3|22836|Rho-related BTB domain containing 3##AB020685|RHOBTB3|22836|Rho-related BTB domain containing 3##AK290034|RHOBTB3|22836|Rho-related BTB domain containing 3##AY027526|SPATA9|83890|spermatogenesis associated 9##AK292338|SPATA9|83890|spermatogenesis associated 9##AK310260|SPATA9|83890|spermatogenesis associated 9##BC047333|SPATA9|83890|spermatogenesis associated 9##AK093225|SPATA9|83890|spermatogenesis associated 9##BC032832|SPATA9|83890|spermatogenesis associated 9##NM_031952|SPATA9|83890|spermatogenesis associated 9##AF162769|GLRX|2745|glutaredoxin (thioltransferase)##BT006689|GLRX|2745|glutaredoxin (thioltransferase)##CR450312|GLRX|2745|glutaredoxin (thioltransferase)##CR542165|GLRX|2745|glutaredoxin (thioltransferase)##DQ892497|GLRX|2745|glutaredoxin (thioltransferase)##DQ895709|GLRX|2745|glutaredoxin (thioltransferase)##D21238|GLRX|2745|glutaredoxin (thioltransferase)##AF069668|GLRX|2745|glutaredoxin (thioltransferase)##BC106075|GLRX|2745|glutaredoxin (thioltransferase)##X76648|GLRX|2745|glutaredoxin (thioltransferase)##AK311868|GLRX|2745|glutaredoxin (thioltransferase)##BC005304|GLRX|2745|glutaredoxin (thioltransferase)##BC010965|GLRX|2745|glutaredoxin (thioltransferase)##NM_001118890|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243658|GLRX|2745|glutaredoxin (thioltransferase)##NM_001243659|GLRX|2745|glutaredoxin (thioltransferase)##NM_002064|GLRX|2745|glutaredoxin (thioltransferase)##DQ891536|ELL2|22936|elongation factor, RNA polymerase II, 2##DQ894725|ELL2|22936|elongation factor, RNA polymerase II, 2##AK297956|ELL2|22936|elongation factor, RNA polymerase II, 2##AK296870|ELL2|22936|elongation factor, RNA polymerase II, 2	0.035556	
chr7	128067616	128067797	reg1010960.p2	3.682	+	TSC_hg19_v1_chr7_-_128050037 AK092452 BC033622 AK054667 AK122994 NM_000883 NM_001102605 NM_001142576 NM_183243	-17669	-	AK131294 TSC_hg19_v1_chr7_-_128049984 CR933672	-17726	-	AK054640 AK293413 AK297943 TSC_hg19_v1_chr7_-_128046013 NM_001142573 NM_001142574 NM_001142575	-21689	-	TSC_hg19_v1_chr7_+_128095931 NM_001098786 NM_013332 AF144755 AK024729 AK222583 BC008573 BC001863 BC093742 BC112183	28260	+	NM_018396 TSC_hg19_v1_chr7_+_128116813 AK302775 BC107586 AK002212 BC064929 BC121115 BC121116 AK299960	49131	+	BC066973 NM_001012454 NM_001128926 BC105729 BC105730 BC105731 BC047310	244640	+	AK092452|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC033622|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054667|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK122994|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_000883|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001102605|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142576|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_183243|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK131294|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##CR933672|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated##AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_018396|METTL2B|55798|methyltransferase like 2B##AK302775|METTL2B|55798|methyltransferase like 2B##BC107586|METTL2B|55798|methyltransferase like 2B##AK002212|METTL2B|55798|methyltransferase like 2B##BC064929|METTL2B|55798|methyltransferase like 2B##BC121115|METTL2B|55798|methyltransferase like 2B##BC121116|METTL2B|55798|methyltransferase like 2B##AK299960|METTL2B|55798|methyltransferase like 2B##BC066973|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001012454|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001128926|FAM71F2|346653|family with sequence similarity 71, member F2##BC105729|FAM71F2|346653|family with sequence similarity 71, member F2##BC105730|FAM71F2|346653|family with sequence similarity 71, member F2##BC105731|FAM71F2|346653|family with sequence similarity 71, member F2##BC047310|FAM71F2|346653|family with sequence similarity 71, member F2	0.0	
chr7	2749953	2750133	reg1002400.p2	3.682	+	AK289723 AB075830 BC146753 NM_133463	-30885	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-78340	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	-78440	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	133765	-	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	333419	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	590956	+	AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1	0.0	
chr7	73081837	73081989	reg1009562.p1	3.682	+	TSC_hg19_v1_chr7_-_73038853 AF245470 AF245471 AF245472 AF245473 AF245474 AB527610 BC012925 AF156603 NM_032951 NM_032952 NM_032953 NM_032954	-43043	-	TSC_hg19_v1_chr7_-_72993012 NM_012453	-88888	-	TSC_hg19_v1_chr7_-_72992936 BC047354 AL080162	-88951	-	TSC_hg19_v1_chr7_+_73082160 AY081952 BC029730 NM_001077621	301	+	TSC_hg19_v1_chr7_+_73082320 BC064621	410	+	TSC_hg19_v1_chr7_-_73097770 AK303989 CU674979 AK058113 AF412025 BC005056 AK094305 NM_032317	15845	-	AF245470|MLXIPL|51085|MLX interacting protein-like##AF245471|MLXIPL|51085|MLX interacting protein-like##AF245472|MLXIPL|51085|MLX interacting protein-like##AF245473|MLXIPL|51085|MLX interacting protein-like##AF245474|MLXIPL|51085|MLX interacting protein-like##BC012925|MLXIPL|51085|MLX interacting protein-like##AF156603|MLXIPL|51085|MLX interacting protein-like##NM_032951|MLXIPL|51085|MLX interacting protein-like##NM_032952|MLXIPL|51085|MLX interacting protein-like##NM_032953|MLXIPL|51085|MLX interacting protein-like##NM_032954|MLXIPL|51085|MLX interacting protein-like##NM_012453|TBL2|26608|transducin (beta)-like 2##BC047354|TBL2|26608|transducin (beta)-like 2##AL080162|TBL2|26608|transducin (beta)-like 2##AY081952|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##BC029730|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##NM_001077621|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##BC064621|VPS37D|155382|vacuolar protein sorting 37 homolog D (S. cerevisiae)##AK058113|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30##AF412025|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30##BC005056|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30##AK094305|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30##NM_032317|DNAJC30|84277|DnaJ (Hsp40) homolog, subfamily C, member 30	0.0	
chrX	37604887	37605067	reg1003575.p2	3.682	+	AY534238 TSC_hg19_v1_chrX_+_37545043 BC036019 NM_021083 Z32684	-59907	+	TSC_hg19_v1_chrX_+_37431024 BC093667 BC093669 BC143528	-173946	+	AK124915 NM_001170331 NM_198511 TSC_hg19_v1_chrX_+_37430917	-174107	+	TSC_hg19_v1_chrX_+_37639284 NM_000397 AK289753 BC032720	34293	+	TSC_hg19_v1_chrX_+_37639311 AK304033 AK301491 AK312929 AK301476 X04011 DQ890878 DQ894032	34338	+	CR450320 CR542213 TSC_hg19_v1_chrX_-_37706781 GQ129368 GQ129369	101799	-	AY534238|XK|7504|X-linked Kx blood group (McLeod syndrome)##BC036019|XK|7504|X-linked Kx blood group (McLeod syndrome)##NM_021083|XK|7504|X-linked Kx blood group (McLeod syndrome)##Z32684|XK|7504|X-linked Kx blood group (McLeod syndrome)##BC093667|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##BC093669|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##BC143528|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##AK124915|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_001170331|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_198511|LANCL3|347404|LanC lantibiotic synthetase component C-like 3 (bacterial)##NM_000397|CYBB|1536|cytochrome b-245, beta polypeptide##AK289753|CYBB|1536|cytochrome b-245, beta polypeptide##BC032720|CYBB|1536|cytochrome b-245, beta polypeptide##AK304033|CYBB|1536|cytochrome b-245, beta polypeptide##AK301491|CYBB|1536|cytochrome b-245, beta polypeptide##AK312929|CYBB|1536|cytochrome b-245, beta polypeptide##AK301476|CYBB|1536|cytochrome b-245, beta polypeptide##X04011|CYBB|1536|cytochrome b-245, beta polypeptide##DQ890878|CYBB|1536|cytochrome b-245, beta polypeptide##DQ894032|CYBB|1536|cytochrome b-245, beta polypeptide##CR450320|DYNLT3|6990|dynein, light chain, Tctex-type 3##CR542213|DYNLT3|6990|dynein, light chain, Tctex-type 3##GQ129368|DYNLT3|6990|dynein, light chain, Tctex-type 3##GQ129369|DYNLT3|6990|dynein, light chain, Tctex-type 3	0.0	
chr10	135523282	135523393	reg1035535.p2	3.681	+	NM_012147	-29678	+	NM_001127386 NM_001127388 NM_001127389 NM_001164467	-33059	+	NM_001127386 NM_033178 NM_001127387 NM_001127388 NM_001127389 NM_001164467 NM_012147	-39628	+	None	None	None	None	None	None	None	None	None	NM_012147|DUX2|26583|double homeobox 2##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_033178|DUX4|22947|double homeobox 4##NM_001127387|DUX4L7|653543|double homeobox 4 like 7##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_012147|DUX2|26583|double homeobox 2	0.559083	CTCF.p2:55:0.478
chr11	120894580	120894671	reg1042654.p1	3.681	+	AB384776 NM_014619 S67803	-363598	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-512160	+	BC063117 NM_001198665 NM_015313	-687008	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	185	+	NM_005422	78749	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	268780	+	NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.0	
chr1	203289875	203289965	reg1030815.p1	3.681	+	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	-15231	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-91105	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-133994	-	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	27464	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	30289	-	AK172740 TSC_hg19_v1_chr1_-_203320256	30341	-	NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.0	
chr12	111028839	111029011	reg1037297.p2	3.681	+	AK124744 TSC_hg19_v1_chr12_-_111021124	-7799	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	-7855	-	TSC_hg19_v1_chr12_-_111020755 AY357944	-8132	-	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	23000	+	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	98033	-	AK293543 NM_001040107	98674	-	AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AY357944|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1	0.0	
chr14	105994651	105994732	reg1004593.p1	3.681	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-1750	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-37055	+	BX248038 NM_001134877	-38172	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	97645	-	BC040042 TSC_hg19_v1_chr14_-_106110945	116232	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	116425	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.0	
chr19	37958319	37958499	reg1034853.p2	3.681	+	AL833408 AY835704 NM_152484	-71	-	TSC_hg19_v1_chr19_+_37862089 NM_032453 BC014325 AK301135 AK091585 AX747074	-96328	+	TSC_hg19_v1_chr19_+_37825560 AK301601 AB013897 AK299969 AK223616 BC017256 NM_181786 BC010024	-132854	+	AK055353 NM_144694 BC130425 BC130433	1619	+	AK131417 NM_001013659 AK303740	39452	+	BX537524 TSC_hg19_v1_chr19_+_37998078 BC150303	39671	+	AL833408|ZNF569|148266|zinc finger protein 569##AY835704|ZNF569|148266|zinc finger protein 569##NM_152484|ZNF569|148266|zinc finger protein 569##NM_032453|ZNF527|84503|zinc finger protein 527##BC014325|ZNF527|84503|zinc finger protein 527##AK301135|ZNF527|84503|zinc finger protein 527##AK091585|ZNF527|84503|zinc finger protein 527##AK301601|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AB013897|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AK299969|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AK223616|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##BC017256|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##NM_181786|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##BC010024|HKR1|284459|HKR1, GLI-Kruppel zinc finger family member##AK055353|ZNF570|148268|zinc finger protein 570##NM_144694|ZNF570|148268|zinc finger protein 570##BC130425|ZNF570|148268|zinc finger protein 570##BC130433|ZNF570|148268|zinc finger protein 570##AK131417|ZNF793|390927|zinc finger protein 793##NM_001013659|ZNF793|390927|zinc finger protein 793##AK303740|ZNF793|390927|zinc finger protein 793##BX537524|ZNF793|390927|zinc finger protein 793##BC150303|ZNF793|390927|zinc finger protein 793	0.0	
chr2	191543561	191543660	reg1033031.p2	3.681	+	TSC_hg19_v1_chr2_+_191513840 NM_005966 BC035724 AK292446	-29644	+	TSC_hg19_v1_chr2_-_191399454 NM_001142645	-144144	-	AK296987 TSC_hg19_v1_chr2_-_191399436	-144183	-	AK289747 NM_014905 TSC_hg19_v1_chr2_+_191745546	201936	+	TSC_hg19_v1_chr2_+_191745547 BC038507 AB020645 AF158555	201947	+	TSC_hg19_v1_chr2_+_191745568 AF097495 Y08264 AF327434	201974	+	NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##NM_001142645|TMEM194B|100131211|transmembrane protein 194B##AK296987|TMEM194B|100131211|transmembrane protein 194B##AK289747|GLS|2744|glutaminase##NM_014905|GLS|2744|glutaminase##BC038507|GLS|2744|glutaminase##AB020645|GLS|2744|glutaminase##AF158555|GLS|2744|glutaminase##AF097495|GLS|2744|glutaminase##Y08264|GLS|2744|glutaminase##AF327434|GLS|2744|glutaminase	0.0	
chr22	42394885	42394982	reg1031723.p2	3.681	+	AK128138 NM_152613 TSC_hg19_v1_chr22_+_42394808 AK129656 AK296138 BC022546 BC022549 BC038789 AK310980 CR456400 AB463345 CU012958 CU013246	-158	+	TSC_hg19_v1_chr22_+_42372810 NM_019106 NM_145733 AK290037 AK299919 AL833942 BC111779 CR456572 AF285107 AF285108 AF285109	-22025	+	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	-51810	-	AB528190 CU013127 CU013415 DQ891874 DQ895062 CR456527 M38083 BC000095 TSC_hg19_v1_chr22_-_42466570	71502	-	TSC_hg19_v1_chr22_-_42466632 M29276	71696	-	M62783 TSC_hg19_v1_chr22_-_42466814	71861	-	AK128138|WBP2NL|164684|WBP2 N-terminal like##NM_152613|WBP2NL|164684|WBP2 N-terminal like##AK129656|WBP2NL|164684|WBP2 N-terminal like##AK296138|WBP2NL|164684|WBP2 N-terminal like##BC022546|WBP2NL|164684|WBP2 N-terminal like##BC022549|WBP2NL|164684|WBP2 N-terminal like##CR456400|WBP2NL|164684|WBP2 N-terminal like##NM_019106|SEPT3|55964|septin 3##NM_145733|SEPT3|55964|septin 3##AK290037|SEPT3|55964|septin 3##AK299919|SEPT3|55964|septin 3##AL833942|SEPT3|55964|septin 3##BC111779|SEPT3|55964|septin 3##CR456572|SEPT3|55964|septin 3##AF285107|SEPT3|55964|septin 3##AF285108|SEPT3|55964|septin 3##AF285109|SEPT3|55964|septin 3##CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M##CU013127|NAGA|4668|N-acetylgalactosaminidase, alpha-##CU013415|NAGA|4668|N-acetylgalactosaminidase, alpha-##DQ891874|NAGA|4668|N-acetylgalactosaminidase, alpha-##DQ895062|NAGA|4668|N-acetylgalactosaminidase, alpha-##CR456527|NAGA|4668|N-acetylgalactosaminidase, alpha-##M38083|NAGA|4668|N-acetylgalactosaminidase, alpha-##BC000095|NAGA|4668|N-acetylgalactosaminidase, alpha-##M29276|NAGA|4668|N-acetylgalactosaminidase, alpha-##M62783|NAGA|4668|N-acetylgalactosaminidase, alpha-	0.0	
chr3	150421616	150421721	reg1034057.p2	3.681	+	NM_016275 TSC_hg19_v1_chr3_+_150321107 BC006012 AK300315 BC026350 AK075006 AY358095 AF195141 BC008411 BC009611 AY358096 AF131856 BC071699 BC036738 BC009556 CU679417 CU693228 CU691400	-100513	+	BC039424 AK125413 TSC_hg19_v1_chr3_-_150321004	-100692	-	TSC_hg19_v1_chr3_+_150264579 BX647951 AL833101 BC011885 AF497978 AB590213 DQ896788 EU176412 AF172818	-157082	+	AK093375 AX748085 BC036239 BC029577 NM_152394	61	-	TSC_hg19_v1_chr3_-_150480902 AK223565	59231	-	TSC_hg19_v1_chr3_-_150480936 BC013082	59262	-	NM_016275|SELT|51714|selenoprotein T##BC006012|SELT|51714|selenoprotein T##AK300315|SELT|51714|selenoprotein T##BC026350|SELT|51714|selenoprotein T##AK075006|SELT|51714|selenoprotein T##AY358095|SELT|51714|selenoprotein T##AF195141|SELT|51714|selenoprotein T##BC008411|SELT|51714|selenoprotein T##BC009611|SELT|51714|selenoprotein T##AY358096|SELT|51714|selenoprotein T##AF131856|SELT|51714|selenoprotein T##BC071699|SELT|51714|selenoprotein T##BC036738|SELT|51714|selenoprotein T##BC009556|SELT|51714|selenoprotein T##AK125413|SERP1|27230|stress-associated endoplasmic reticulum protein 1##BX647951|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AL833101|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##BC011885|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AF497978|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##DQ896788|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##EU176412|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AF172818|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AK093375|FAM194A|131831|family with sequence similarity 194, member A##BC036239|FAM194A|131831|family with sequence similarity 194, member A##BC029577|FAM194A|131831|family with sequence similarity 194, member A##NM_152394|FAM194A|131831|family with sequence similarity 194, member A##AK223565|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##BC013082|SIAH2|6478|seven in absentia homolog 2 (Drosophila)	0.016708	
chr4	113438881	113439062	reg1030136.p3	3.681	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	-1639	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	-220444	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	-231970	-	TSC_hg19_v1_chr4_-_113558057 BC044799 BC028584 AK002193	119075	-	NM_016648	119148	+	TSC_hg19_v1_chr4_-_113558120 AK302613 AK299831 NM_018392	119164	-	BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC044799|C4orf21|55345|chromosome 4 open reading frame 21##BC028584|C4orf21|55345|chromosome 4 open reading frame 21##AK002193|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7##AK302613|C4orf21|55345|chromosome 4 open reading frame 21##AK299831|C4orf21|55345|chromosome 4 open reading frame 21##NM_018392|C4orf21|55345|chromosome 4 open reading frame 21	0.0	
chr6	1793310	1793475	reg1042840.p2	3.681	+	TSC_hg19_v1_chr6_+_1611545 BC169307	-181818	+	BC134421 NM_001453	-182712	+	NM_001452 U13220 AB463646	-403267	+	AF040260 NM_001253846	382832	-	CR541929 CR541947 DQ892789 DQ896036 AF042377 TSC_hg19_v1_chr6_-_2245809 AK130651 AK313953 BC000117 NM_001500	452406	-	TSC_hg19_v1_chr6_+_2245995 AK023629	452621	+	BC169307|FOXC1|2296|forkhead box C1##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541929|GMDS|2762|GDP-mannose 4,6-dehydratase##CR541947|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ892789|GMDS|2762|GDP-mannose 4,6-dehydratase##DQ896036|GMDS|2762|GDP-mannose 4,6-dehydratase##AF042377|GMDS|2762|GDP-mannose 4,6-dehydratase##AK130651|GMDS|2762|GDP-mannose 4,6-dehydratase##AK313953|GMDS|2762|GDP-mannose 4,6-dehydratase##BC000117|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001500|GMDS|2762|GDP-mannose 4,6-dehydratase	0.0	
chr6	73844364	73844480	reg1037792.p1	3.681	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	-512361	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	-512533	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	-512852	+	BC004267 NM_001126063	90752	-	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	128444	-	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	128551	+	AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC004267|KHDC1L|100129128|KH homology domain containing 1-like##NM_001126063|KHDC1L|100129128|KH homology domain containing 1-like##BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1	0.997856	CTCF.p2:3:0.961
chr9	132890517	132890649	reg1038574.p2	3.681	+	TSC_hg19_v1_chr9_+_132816199 AK026244 AK225456 BC030147 AF376725 AX776003 BC110518 AK293092 AB385490 AB046844	-74367	+	TSC_hg19_v1_chr9_+_132816196 BC143655	-74392	+	BC039728 NM_001136557 NM_001136558 NM_020960	-74599	+	AK024651 TSC_hg19_v1_chr9_+_132897386	6781	+	TSC_hg19_v1_chr9_+_132934685 BC004856 NM_014286 AF134479 AF186409 X84048 AB463656	44230	+	NM_001128826	72288	+	AK026244|GPR107|57720|G protein-coupled receptor 107##AK225456|GPR107|57720|G protein-coupled receptor 107##BC030147|GPR107|57720|G protein-coupled receptor 107##AF376725|GPR107|57720|G protein-coupled receptor 107##BC110518|GPR107|57720|G protein-coupled receptor 107##AK293092|GPR107|57720|G protein-coupled receptor 107##AB046844|GPR107|57720|G protein-coupled receptor 107##BC143655|GPR107|57720|G protein-coupled receptor 107##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107##AK024651|GPR107|57720|G protein-coupled receptor 107##BC004856|NCS1|23413|neuronal calcium sensor 1##NM_014286|NCS1|23413|neuronal calcium sensor 1##AF134479|NCS1|23413|neuronal calcium sensor 1##AF186409|NCS1|23413|neuronal calcium sensor 1##X84048|NCS1|23413|neuronal calcium sensor 1##NM_001128826|NCS1|23413|neuronal calcium sensor 1	0.0	
chr1	197297089	197297183	reg1038044.p2	3.680	+	NM_001193640 NM_201253 AK299368 AK289733 AK307844 AB208923 AF154671 AY043324 AY043325 BC136271 BC143726 AJ748821	-59699	+	BC132818 BC136600 AK128549 AY163816 NM_194314	-127483	-	AF509326 AY099892 AY367065 AY971955 AY971956 AY971957 BC015396 TSC_hg19_v1_chr1_-_197115800 AK226178 AK125107 NM_001206846 NM_018136	-181442	-	AK000061 TSC_hg19_v1_chr1_-_197552357	255196	-	TSC_hg19_v1_chr1_-_197744376 BC022561	447198	-	TSC_hg19_v1_chr1_-_197744396 BC063456	447260	-	NM_001193640|CRB1|23418|crumbs homolog 1 (Drosophila)##NM_201253|CRB1|23418|crumbs homolog 1 (Drosophila)##AK299368|CRB1|23418|crumbs homolog 1 (Drosophila)##AK289733|CRB1|23418|crumbs homolog 1 (Drosophila)##AK307844|CRB1|23418|crumbs homolog 1 (Drosophila)##AB208923|CRB1|23418|crumbs homolog 1 (Drosophila)##AF154671|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043324|CRB1|23418|crumbs homolog 1 (Drosophila)##AY043325|CRB1|23418|crumbs homolog 1 (Drosophila)##BC136271|CRB1|23418|crumbs homolog 1 (Drosophila)##BC143726|CRB1|23418|crumbs homolog 1 (Drosophila)##AJ748821|CRB1|23418|crumbs homolog 1 (Drosophila)##BC132818|ZBTB41|360023|zinc finger and BTB domain containing 41##BC136600|ZBTB41|360023|zinc finger and BTB domain containing 41##AK128549|ZBTB41|360023|zinc finger and BTB domain containing 41##AY163816|ZBTB41|360023|zinc finger and BTB domain containing 41##NM_194314|ZBTB41|360023|zinc finger and BTB domain containing 41##AF509326|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY099892|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY367065|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971955|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971956|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AY971957|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##BC015396|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK226178|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK125107|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_001206846|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##NM_018136|ASPM|259266|asp (abnormal spindle) homolog, microcephaly associated (Drosophila)##AK000061|DENND1B|163486|DENN/MADD domain containing 1B##BC022561|DENND1B|163486|DENN/MADD domain containing 1B##BC063456|DENND1B|163486|DENN/MADD domain containing 1B	0.964254	CTCF.p2:-24:0.964
chr13	33683612	33683691	reg1017620.p1	3.680	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-93128	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-522968	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-523012	+	AY082590 BC046563 NM_001243466 NM_178007	76564	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	96513	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	176216	-	AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr1	55416191	55416371	reg1004328.p1	3.680	+	NM_014762 TSC_hg19_v1_chr1_-_55352925	-63349	-	TSC_hg19_v1_chr1_-_55352904 D13643	-63383	-	TSC_hg19_v1_chr1_-_55352884 AF261758	-63396	-	BC029775 NM_182532	30183	+	AK129999 AY034632 NM_057176 BC103898 BC103899 BC103900	48340	+	NM_174936 TSC_hg19_v1_chr1_+_55505192	88889	+	NM_014762|DHCR24|1718|24-dehydrocholesterol reductase##D13643|DHCR24|1718|24-dehydrocholesterol reductase##AF261758|DHCR24|1718|24-dehydrocholesterol reductase##BC029775|TMEM61|199964|transmembrane protein 61##NM_182532|TMEM61|199964|transmembrane protein 61##AK129999|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##AY034632|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_057176|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103898|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103899|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##BC103900|BSND|7809|Bartter syndrome, infantile, with sensorineural deafness (Barttin)##NM_174936|PCSK9|255738|proprotein convertase subtilisin/kexin type 9	0.0	
chr16	88296543	88296650	reg1037745.p1	3.680	+	AK094158 NM_001173543	-292973	+	AK315535 NM_001173542	-303120	+	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	-311428	+	NM_001127464	197282	+	TSC_hg19_v1_chr16_+_88519687 AF488691	223109	+	TSC_hg19_v1_chr16_+_88519921 NM_153813	223369	+	AK094158|BANP|54971|BTG3 associated nuclear protein##NM_001173543|BANP|54971|BTG3 associated nuclear protein##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein##NM_001127464|ZNF469|84627|zinc finger protein 469##AF488691|ZFPM1|161882|zinc finger protein, multitype 1##NM_153813|ZFPM1|161882|zinc finger protein, multitype 1	0.0	
chr17	62971964	62972083	reg1034556.p1	3.680	+	TSC_hg19_v1_chr17_-_62971685 BX537538 AK056627 BC063466 AK311317	-403	-	TSC_hg19_v1_chr17_-_62915587 AK294371	-56427	-	AB011135 NM_199340	-57121	-	TSC_hg19_v1_chr17_-_63009302 AK026902	37283	-	TSC_hg19_v1_chr17_-_63052724 AB528470 AF493902 CU691408 DQ893572 DQ894448 AK313672	80695	-	TSC_hg19_v1_chr17_-_63052756 L22075 BC036756	80737	-	BX537538|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK056627|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##BC063466|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK311317|AMZ2P1|201283|archaelysin family metallopeptidase 2 pseudogene 1##AK294371|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AB011135|LRRC37A3|374819|leucine rich repeat containing 37, member A3##NM_199340|LRRC37A3|374819|leucine rich repeat containing 37, member A3##AK026902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AF493902|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ893572|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##DQ894448|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##AK313672|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##L22075|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13##BC036756|GNA13|10672|guanine nucleotide binding protein (G protein), alpha 13	0.0	
chr17	7382363	7382544	reg1032823.p2	3.680	+	AK298938 TSC_hg19_v1_chr17_+_7348840 AK294880	-33603	+	TSC_hg19_v1_chr17_+_7348379 BC023553 NM_000747 AK308106 BC011371 X14830 DQ894641	-34049	+	BC032502 NM_004112 AB209390 AB590462 AY049782 U66199	-39640	+	TSC_hg19_v1_chr17_-_7382882 AK122971 AY302699	400	-	AB040971 NM_001128833 TSC_hg19_v1_chr17_-_7382945	512	-	NM_001102614	2267	+	AK298938|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##AK294880|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##BC023553|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##NM_000747|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##AK308106|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##BC011371|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##X14830|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##DQ894641|CHRNB1|1140|cholinergic receptor, nicotinic, beta 1 (muscle)##BC032502|FGF11|2256|fibroblast growth factor 11##NM_004112|FGF11|2256|fibroblast growth factor 11##AB209390|FGF11|2256|fibroblast growth factor 11##AY049782|FGF11|2256|fibroblast growth factor 11##U66199|FGF11|2256|fibroblast growth factor 11##AK122971|ZBTB4|57659|zinc finger and BTB domain containing 4##AY302699|ZBTB4|57659|zinc finger and BTB domain containing 4##AB040971|ZBTB4|57659|zinc finger and BTB domain containing 4##NM_001128833|ZBTB4|57659|zinc finger and BTB domain containing 4##NM_001102614|SLC35G6|643664|solute carrier family 35, member G6	0.0	
chr17	79565556	79565695	reg1036779.p2	3.680	+	TSC_hg19_v1_chr17_-_79519415 AK024644 BC008883 DQ989324 NM_025161	-46226	-	AL834374 TSC_hg19_v1_chr17_-_79514725	-50931	-	NM_001077182 NM_012418 AF030165 BC126295 BC130330 HQ258429	-70139	+	DQ895356 TSC_hg19_v1_chr17_-_79604087 AB040932 AK000664	38398	-	TSC_hg19_v1_chr17_-_79604107 AK294473	38477	-	TSC_hg19_v1_chr17_-_79604120 BC025930	38493	-	AK024644|C17orf70|80233|chromosome 17 open reading frame 70##BC008883|C17orf70|80233|chromosome 17 open reading frame 70##DQ989324|C17orf70|80233|chromosome 17 open reading frame 70##NM_025161|C17orf70|80233|chromosome 17 open reading frame 70##AL834374|C17orf70|80233|chromosome 17 open reading frame 70##NM_001077182|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##NM_012418|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##AF030165|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC126295|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC130330|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##HQ258429|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##DQ895356|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AB040932|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AK000664|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AK294473|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##BC025930|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)	0.0	
chr20	62073615	62073724	reg1040496.p2	3.680	+	X89741 Y08421 AB590558 AK314907 TSC_hg19_v1_chr20_-_61992648 BC096290 BC096291 BC096292 BC096293 L35901 NM_000744 U62433	-81038	-	BC043183 NM_020882 BC041767	-149113	+	AK123367 TSC_hg19_v1_chr20_+_61915676	-157994	+	BT007043 AB527167 Y15065 BC000699 AF110020 TSC_hg19_v1_chr20_-_62104002 AK293727 AF033348 AF074247 D82346 NM_004518 NM_172106 NM_172107 NM_172108 NM_172109	30260	-	TSC_hg19_v1_chr20_-_62130437 X70940 AK307536 NM_001958 BC110409	56844	-	TSC_hg19_v1_chr20_+_62152117 BC002531 NM_024299 AK024699 AK311318	78464	+	X89741|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##Y08421|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##AK314907|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096290|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096291|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096292|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC096293|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##L35901|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##NM_000744|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##U62433|CHRNA4|1137|cholinergic receptor, nicotinic, alpha 4##BC043183|COL20A1|57642|collagen, type XX, alpha 1##NM_020882|COL20A1|57642|collagen, type XX, alpha 1##BC041767|COL20A1|57642|collagen, type XX, alpha 1##AK123367|ARFGAP1|55738|ADP-ribosylation factor GTPase activating protein 1##BT007043|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##Y15065|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##BC000699|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF110020|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AK293727|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF033348|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##AF074247|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##D82346|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_004518|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172106|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172107|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172108|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##NM_172109|KCNQ2|3785|potassium voltage-gated channel, KQT-like subfamily, member 2##X70940|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##AK307536|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##NM_001958|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC110409|EEF1A2|1917|eukaryotic translation elongation factor 1 alpha 2##BC002531|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##NM_024299|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)##AK024699|PPDPF|79144|pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)	0.948735	CTCF.p2:-22:0.949
chr21	34577943	34578062	reg1042432.p1	3.680	+	TSC_hg19_v1_chr21_+_34444006 BC011252	-133957	+	TSC_hg19_v1_chr21_+_34442554 AB463154 DQ896828 BC026989	-135441	+	TSC_hg19_v1_chr21_+_34442446 BC033290 NM_138983 AL834450 AB209791	-135550	+	BC002793 NM_000874 NM_207584 NM_207585 TSC_hg19_v1_chr21_+_34602236	24218	+	TSC_hg19_v1_chr21_+_34602281 L41942 L41944	24277	+	TSC_hg19_v1_chr21_+_34602305 BC013156 X77722 X89814 U29584	24400	+	BC011252|OLIG1|116448|oligodendrocyte transcription factor 1##DQ896828|OLIG1|116448|oligodendrocyte transcription factor 1##BC026989|OLIG1|116448|oligodendrocyte transcription factor 1##BC033290|OLIG1|116448|oligodendrocyte transcription factor 1##NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1##AL834450|OLIG1|116448|oligodendrocyte transcription factor 1##AB209791|OLIG1|116448|oligodendrocyte transcription factor 1##BC002793|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_000874|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##NM_207585|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41942|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##L41944|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##BC013156|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X77722|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##X89814|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2##U29584|IFNAR2|3455|interferon (alpha, beta and omega) receptor 2	0.534833	CTCF.p2:-6:0.535
chr2	219149306	219149413	reg1041779.p1	3.680	+	AF318057 AF417001 NM_001077399 NM_015488 AK289867 TSC_hg19_v1_chr2_+_219135241 BC036457 AY039043 BC021118 AL080092 CU676836 EU831585 EU831670 AB033010	-14166	+	AK131047 TSC_hg19_v1_chr2_-_219134886 NM_001087	-14479	-	TSC_hg19_v1_chr2_-_219134861 BC039866 CR456755 M95627	-14505	-	TSC_hg19_v1_chr2_-_219157237 AF193045 BC007980 AK095270 AK300597 AK298123 BC026348 AK130713 AK298500 BC026693 AK130380 BC013428 NM_022152	7896	-	TSC_hg19_v1_chr2_+_219187970 NM_022572	38556	+	TSC_hg19_v1_chr2_+_219188021 AY358753 CU678300 AM393075 AM393168 BC002937 AK309308	38678	+	AF318057|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AF417001|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##NM_001077399|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##NM_015488|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK289867|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC036457|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AY039043|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC021118|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AL080092|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##EU831585|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##EU831670|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AB033010|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK131047|AAMP|14|angio-associated, migratory cell protein##NM_001087|AAMP|14|angio-associated, migratory cell protein##BC039866|AAMP|14|angio-associated, migratory cell protein##CR456755|AAMP|14|angio-associated, migratory cell protein##M95627|AAMP|14|angio-associated, migratory cell protein##AF193045|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC007980|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK300597|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK298123|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC026348|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK130713|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK298500|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC026693|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##AK130380|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##BC013428|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##NM_022152|TMBIM1|64114|transmembrane BAX inhibitor motif containing 1##NM_022572|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AY358753|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AM393075|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AM393168|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC002937|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK309308|PNKD|25953|paroxysmal nonkinesigenic dyskinesia	0.0	
chr3	72225711	72225881	reg1033655.p1	3.680	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-391525	-	AK313656 NM_173359	-421873	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-422274	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	671752	-	BC017274 TSC_hg19_v1_chr3_-_72897575	671779	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	671796	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr4	106201615	106201712	reg1037703.p1	3.680	+	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	-133619	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	-133852	+	BX640738 NM_017628	-134632	+	AM393754 AM393796 TSC_hg19_v1_chr4_-_106395220 AK294097 AL136655 AF161473 BC039462 BC008246 BC035569 BC012903 BC022803 AK289607 CU691190 AM393483 EU831414 EU831507 BC001065 BC021071 AB528841 AK297096 AK299125 AK299501 BC057219 AK000466 AB026722 AF217187 NM_006903 NM_176866 NM_176867 NM_176869	193527	-	AK000191 NM_001242729 NM_017700 BC105695	272119	+	TSC_hg19_v1_chr4_-_106629819 BC014442 AK314939 NM_001142471 NM_020395	428178	-	AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2##AM393754|PPA2|27068|pyrophosphatase (inorganic) 2##AM393796|PPA2|27068|pyrophosphatase (inorganic) 2##AK294097|PPA2|27068|pyrophosphatase (inorganic) 2##AL136655|PPA2|27068|pyrophosphatase (inorganic) 2##AF161473|PPA2|27068|pyrophosphatase (inorganic) 2##BC039462|PPA2|27068|pyrophosphatase (inorganic) 2##BC008246|PPA2|27068|pyrophosphatase (inorganic) 2##BC035569|PPA2|27068|pyrophosphatase (inorganic) 2##BC012903|PPA2|27068|pyrophosphatase (inorganic) 2##BC022803|PPA2|27068|pyrophosphatase (inorganic) 2##AK289607|PPA2|27068|pyrophosphatase (inorganic) 2##AM393483|PPA2|27068|pyrophosphatase (inorganic) 2##EU831414|PPA2|27068|pyrophosphatase (inorganic) 2##EU831507|PPA2|27068|pyrophosphatase (inorganic) 2##AK299125|PPA2|27068|pyrophosphatase (inorganic) 2##BC057219|PPA2|27068|pyrophosphatase (inorganic) 2##AK000466|PPA2|27068|pyrophosphatase (inorganic) 2##AB026722|PPA2|27068|pyrophosphatase (inorganic) 2##AF217187|PPA2|27068|pyrophosphatase (inorganic) 2##NM_006903|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176866|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176867|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176869|PPA2|27068|pyrophosphatase (inorganic) 2##AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_001242729|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC014442|INTS12|57117|integrator complex subunit 12##AK314939|INTS12|57117|integrator complex subunit 12##NM_001142471|INTS12|57117|integrator complex subunit 12##NM_020395|INTS12|57117|integrator complex subunit 12	0.0	
chr5	131977132	131977286	reg1026790.p1	3.680	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-84569	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	-98017	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	-150728	-	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	16681	+	NM_000589 NM_172348	32163	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	96008	-	NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A	0.0	
chr5	56292241	56292336	reg1040261.p1	3.680	+	TSC_hg19_v1_chr5_-_56247951 BX537798 BX640907 CR749246 CR749805 BX647359 BX648294 BC041348 NM_152622	-44344	-	NM_001171990 NM_153706 BC036528 AK309152	-87156	+	TSC_hg19_v1_chr5_+_56111395 AF042838	-180870	+	TSC_hg19_v1_chr5_+_56469684 AK311625 NM_001203246 NM_022913	177426	+	TSC_hg19_v1_chr5_+_56469911 AL161991 AY226828	177609	+	BC113004 NM_001127235	178985	+	BX537798|MIER3|166968|mesoderm induction early response 1, family member 3##BX640907|MIER3|166968|mesoderm induction early response 1, family member 3##CR749246|MIER3|166968|mesoderm induction early response 1, family member 3##CR749805|MIER3|166968|mesoderm induction early response 1, family member 3##BX647359|MIER3|166968|mesoderm induction early response 1, family member 3##BX648294|MIER3|166968|mesoderm induction early response 1, family member 3##BC041348|MIER3|166968|mesoderm induction early response 1, family member 3##NM_152622|MIER3|166968|mesoderm induction early response 1, family member 3##NM_001171990|C5orf35|133383|chromosome 5 open reading frame 35##NM_153706|C5orf35|133383|chromosome 5 open reading frame 35##BC036528|C5orf35|133383|chromosome 5 open reading frame 35##AK309152|C5orf35|133383|chromosome 5 open reading frame 35##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK311625|GPBP1|65056|GC-rich promoter binding protein 1##NM_001203246|GPBP1|65056|GC-rich promoter binding protein 1##NM_022913|GPBP1|65056|GC-rich promoter binding protein 1##AL161991|GPBP1|65056|GC-rich promoter binding protein 1##AY226828|GPBP1|65056|GC-rich promoter binding protein 1##BC113004|GPBP1|65056|GC-rich promoter binding protein 1##NM_001127235|GPBP1|65056|GC-rich promoter binding protein 1	0.0	
chr8	121926999	121927066	reg1033728.p1	3.680	+	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-102526	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-102762	-	TSC_hg19_v1_chr8_-_121824090 AB590740	-102969	-	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	726594	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	1866879	+	BC042145 TSC_hg19_v1_chr8_+_123794000	1866962	+	NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2	0.0	
chr8	145008236	145008417	reg1032817.p1	3.680	+	AB051895 NM_031308	-60893	-	TSC_hg19_v1_chr8_-_144923180 BC071605 AK293943 NM_178564	-85167	-	TSC_hg19_v1_chr8_-_144911540 AF114818 AK292373 NM_014281 NM_078480	-96776	-	AF330791 TSC_hg19_v1_chr8_-_145013766 AY480051 NM_201384	5377	-	AY480050 NM_201383 TSC_hg19_v1_chr8_-_145016793	8435	-	AF330792 AY480049 TSC_hg19_v1_chr8_-_145018117 NM_201382	9778	-	AB051895|EPPK1|83481|epiplakin 1##NM_031308|EPPK1|83481|epiplakin 1##BC071605|NRBP2|340371|nuclear receptor binding protein 2##AK293943|NRBP2|340371|nuclear receptor binding protein 2##NM_178564|NRBP2|340371|nuclear receptor binding protein 2##AF114818|PUF60|22827|poly-U binding splicing factor 60KDa##AK292373|PUF60|22827|poly-U binding splicing factor 60KDa##NM_014281|PUF60|22827|poly-U binding splicing factor 60KDa##NM_078480|PUF60|22827|poly-U binding splicing factor 60KDa##AY480051|PLEC|5339|plectin##NM_201384|PLEC|5339|plectin##AY480050|PLEC|5339|plectin##NM_201383|PLEC|5339|plectin##AF330792|PLEC|5339|plectin##AY480049|PLEC|5339|plectin##NM_201382|PLEC|5339|plectin	0.010935	
chr9	126718100	126718207	reg1034219.p1	3.680	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-25842	-	NM_173689 AK123000 DQ426866 AY720432	-599660	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-687265	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	55730	+	TSC_hg19_v1_chr9_+_126774046 BC034458	55918	+	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	301857	+	BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC034458|LHX2|9355|LIM homeobox 2##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.891796	CTCF.p2:-26:0.892
chr9	92003249	92003318	reg1035307.p2	3.680	+	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-69865	+	TSC_hg19_v1_chr9_+_91926112 NM_001827 X54942 BC006458 AB527990 BT006630 CR407630 CR542118	-77125	+	BC026314 NM_016848 TSC_hg19_v1_chr9_-_91793734	-209573	-	BC054500 NM_001142287 NM_006378	91327	-	BX648216 TSC_hg19_v1_chr9_-_92113005	109724	-	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	216698	+	AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_001827|CKS2|1164|CDC28 protein kinase regulatory subunit 2##X54942|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC006458|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BT006630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR407630|CKS2|1164|CDC28 protein kinase regulatory subunit 2##CR542118|CKS2|1164|CDC28 protein kinase regulatory subunit 2##BC026314|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##NM_016848|SHC3|53358|SHC (Src homology 2 domain containing) transforming protein 3##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma	0.0	
chr10	125852406	125852482	reg1031360.p2	3.679	+	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-545	-	BC137492 BC146862 AY358565 NM_198148	-200948	-	AJ505757 NM_153442 BC112011 BC113462	-426567	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	709	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	255029	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	255074	-	BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase	0.547447	CTCF.p2:35:0.547
chr10	63663202	63663331	reg1023738.p1	3.679	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-1835	+	NM_032199	-2254	+	BC041932 NM_173554	-240548	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	145830	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	365273	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	470777	+	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365	0.0	
chr1	38791994	38792104	reg1029442.p1	3.679	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-279600	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-313619	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-313664	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	533337	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	546967	-	AK312811 BC051675 AK123051 NM_030772	555228	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.0	
chr1	45805440	45805604	reg1036102.p1	3.679	+	AY169960 NM_025077 TSC_hg19_v1_chr1_+_45805393	-137	+	NM_032756 BC007293	-12962	+	TSC_hg19_v1_chr1_+_45769564 BC035497	-35947	+	TSC_hg19_v1_chr1_+_45805740 AK293704	198	+	TSC_hg19_v1_chr1_+_45805845 AK024011	307	+	AB032924 AB032925 AB032926 AB025227 NM_001048174 AB032927 AB032928 AB032929 NM_001048172 NM_001048173 CU678424 AB590565 AB032920 AB032921 AB032922 AB032923 BC003178 AK293830 NM_001048171 NM_001128425 NM_012222	351	-	AY169960|TOE1|114034|target of EGR1, member 1 (nuclear)##NM_025077|TOE1|114034|target of EGR1, member 1 (nuclear)##NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##BC035497|LOC400752|400752|uncharacterized LOC400752##AK293704|TOE1|114034|target of EGR1, member 1 (nuclear)##AK024011|TOE1|114034|target of EGR1, member 1 (nuclear)##AB032924|MUTYH|4595|mutY homolog (E. coli)##AB032925|MUTYH|4595|mutY homolog (E. coli)##AB032926|MUTYH|4595|mutY homolog (E. coli)##AB025227|MUTYH|4595|mutY homolog (E. coli)##NM_001048174|MUTYH|4595|mutY homolog (E. coli)##AB032927|MUTYH|4595|mutY homolog (E. coli)##AB032928|MUTYH|4595|mutY homolog (E. coli)##AB032929|MUTYH|4595|mutY homolog (E. coli)##NM_001048172|MUTYH|4595|mutY homolog (E. coli)##NM_001048173|MUTYH|4595|mutY homolog (E. coli)##AB032920|MUTYH|4595|mutY homolog (E. coli)##AB032921|MUTYH|4595|mutY homolog (E. coli)##AB032922|MUTYH|4595|mutY homolog (E. coli)##AB032923|MUTYH|4595|mutY homolog (E. coli)##BC003178|MUTYH|4595|mutY homolog (E. coli)##AK293830|MUTYH|4595|mutY homolog (E. coli)##NM_001048171|MUTYH|4595|mutY homolog (E. coli)##NM_001128425|MUTYH|4595|mutY homolog (E. coli)##NM_012222|MUTYH|4595|mutY homolog (E. coli)	0.0	
chr19	50400420	50400597	reg1030722.p2	3.679	+	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	-355	-	TSC_hg19_v1_chr19_+_50381392 AK090606 AX746531	-19050	+	NM_001168222 NM_024682 TSC_hg19_v1_chr19_+_50380945 BC003516 AK022230 AK300007 AK309412 AB449903 AB590884 CU678472	-19659	+	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	12594	-	NM_012068 AK290592	31480	+	NM_001193646 AK091985 AB021663 AK024402 TSC_hg19_v1_chr19_+_50432461 AB073613 BC005174	31926	+	BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##AK090606|TBC1D17|79735|TBC1 domain family, member 17##NM_001168222|TBC1D17|79735|TBC1 domain family, member 17##NM_024682|TBC1D17|79735|TBC1 domain family, member 17##BC003516|TBC1D17|79735|TBC1 domain family, member 17##AK022230|TBC1D17|79735|TBC1 domain family, member 17##AK300007|TBC1D17|79735|TBC1 domain family, member 17##AK309412|TBC1D17|79735|TBC1 domain family, member 17##AB449903|TBC1D17|79735|TBC1 domain family, member 17##CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5##NM_001193646|ATF5|22809|activating transcription factor 5##AK091985|ATF5|22809|activating transcription factor 5##AB021663|ATF5|22809|activating transcription factor 5##AK024402|ATF5|22809|activating transcription factor 5##AB073613|ATF5|22809|activating transcription factor 5##BC005174|ATF5|22809|activating transcription factor 5	0.013694	
chr20	46799715	46799798	reg1038899.p1	3.679	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-384438	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-385004	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-669072	+	AB037836 TSC_hg19_v1_chr20_-_47444291	644530	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	644683	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	738562	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.020649	
chr3	52347910	52348090	reg1038908.p2	3.679	+	TSC_hg19_v1_chr3_+_52321862 BC042151 BC021896	-26126	+	AF448855 AY172690 BC036862 NM_001144951 NM_145262 TSC_hg19_v1_chr3_+_52321852 AK074215	-26157	+	TSC_hg19_v1_chr3_-_52312656 NM_025222	-35344	-	AB037831 AB290163 NM_015512	2334	+	CU674778 D88812 DQ892545 DQ895756 AF045581 TSC_hg19_v1_chr3_-_52443999 BC001596 NM_004656	95954	-	TSC_hg19_v1_chr3_-_52444016 D87462	96016	-	BC042151|GLYCTK|132158|glycerate kinase##BC021896|GLYCTK|132158|glycerate kinase##AF448855|GLYCTK|132158|glycerate kinase##AY172690|GLYCTK|132158|glycerate kinase##BC036862|GLYCTK|132158|glycerate kinase##NM_001144951|GLYCTK|132158|glycerate kinase##NM_145262|GLYCTK|132158|glycerate kinase##AK074215|GLYCTK|132158|glycerate kinase##NM_025222|WDR82|80335|WD repeat domain 82##AB037831|DNAH1|25981|dynein, axonemal, heavy chain 1##AB290163|DNAH1|25981|dynein, axonemal, heavy chain 1##NM_015512|DNAH1|25981|dynein, axonemal, heavy chain 1##D88812|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##DQ892545|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##DQ895756|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##AF045581|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##BC001596|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##NM_004656|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)##D87462|BAP1|8314|BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)	0.0	
chr4	120992462	120992594	reg1031982.p1	3.679	+	EU831987 EU832080 AB528692 AF394735 TSC_hg19_v1_chr4_-_120987954 U65410 BC070283 AJ000186 BC005945 BC000356 U31278 AK223433 AK313827 AK298228 NM_002358	-4574	-	D89094 TSC_hg19_v1_chr4_-_120550167	-442366	-	AB527373 AM393036 AM393270 AM393448 AK290189 BC126233 AJ004865 AF155192 TSC_hg19_v1_chr4_-_120549960 AF043731 NM_001083	-442625	-	TSC_hg19_v1_chr4_-_121843992 AB464059 BC121037 BC121038 AK314293 AK310958 AF272897 AK056352 NM_018699 BC066942	851467	-	BC019351 AK289615 NM_024574 TSC_hg19_v1_chr4_-_121993690	1001102	-	AF277289 AJ320534 AK290409 BC128408 EF585496 NM_024873	1092956	-	EU831987|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##EU832080|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AF394735|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC070283|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AJ000186|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC005945|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##BC000356|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK223433|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK313827|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AK298228|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##NM_002358|MAD2L1|4085|MAD2 mitotic arrest deficient-like 1 (yeast)##AM393036|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393270|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393448|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AK290189|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC126233|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AJ004865|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155192|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF043731|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_001083|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##BC121037|PRDM5|11107|PR domain containing 5##BC121038|PRDM5|11107|PR domain containing 5##AK314293|PRDM5|11107|PR domain containing 5##AK310958|PRDM5|11107|PR domain containing 5##AF272897|PRDM5|11107|PR domain containing 5##AK056352|PRDM5|11107|PR domain containing 5##NM_018699|PRDM5|11107|PR domain containing 5##BC066942|PRDM5|11107|PR domain containing 5##BC019351|NDNF|79625|neuron-derived neurotrophic factor##AK289615|NDNF|79625|neuron-derived neurotrophic factor##NM_024574|NDNF|79625|neuron-derived neurotrophic factor##AF277289|TNIP3|79931|TNFAIP3 interacting protein 3##AJ320534|TNIP3|79931|TNFAIP3 interacting protein 3##AK290409|TNIP3|79931|TNFAIP3 interacting protein 3##BC128408|TNIP3|79931|TNFAIP3 interacting protein 3##EF585496|TNIP3|79931|TNFAIP3 interacting protein 3##NM_024873|TNIP3|79931|TNFAIP3 interacting protein 3	0.999087	CTCF.p2:14:0.999
chr6	96021160	96021341	reg1042026.p1	3.679	+	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	-1892067	-	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-4724412	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-4724567	-	TSC_hg19_v1_chr6_-_96025325 BC047582	4039	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	4151	+	NM_006581 AK314966 TSC_hg19_v1_chr6_+_96463867 BC001879 BC036101 AB023021	442617	+	BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha##NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)	0.0	
chr7	23301748	23301929	reg1006183.p2	3.679	+	AF322909 TSC_hg19_v1_chr7_+_23286426 BC025297 BC011595 CU679974 CU689536 AB528457 DQ892084 DQ895277 BT007074	-15390	+	TSC_hg19_v1_chr7_+_23286407 AJ505015	-15433	+	TSC_hg19_v1_chr7_+_23286393 AK292078 AK296779 AK297031 AK297803 AY359124 BC032783	-15444	+	TSC_hg19_v1_chr7_+_23338957 BC012331 NM_138446 AK127742 AK316559	37127	+	TSC_hg19_v1_chr7_-_23509637 AB529064 CU688032	207841	-	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	208160	-	AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb##BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb##BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb##BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb##AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb##AK292078|GPNMB|10457|glycoprotein (transmembrane) nmb##AK296779|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297031|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297803|GPNMB|10457|glycoprotein (transmembrane) nmb##AY359124|GPNMB|10457|glycoprotein (transmembrane) nmb##BC032783|GPNMB|10457|glycoprotein (transmembrane) nmb##BC012331|C7orf30|115416|chromosome 7 open reading frame 30##NM_138446|C7orf30|115416|chromosome 7 open reading frame 30##AK127742|C7orf30|115416|chromosome 7 open reading frame 30##AK316559|C7orf30|115416|chromosome 7 open reading frame 30##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	0.0	
chr9	126080566	126080701	reg1030689.p1	3.679	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-49745	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	-49813	-	TSC_hg19_v1_chr9_-_125941308 BC002693	-139313	-	NM_173689 AK123000 DQ426866 AY720432	37860	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	611678	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	693250	+	AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein##BC002693|STRBP|55342|spermatid perinuclear RNA binding protein##NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2	0.0	
chr11	104694516	104694632	reg1036591.p1	3.678	+	TSC_hg19_v1_chr11_-_104035100 BC030645	-659474	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	-659534	-	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	-659780	-	AF464191 AF464192 AF464193 AF464194 AF464195 AF486844 AF486845 AF486846 AF486847 NM_001191016	74822	-	NM_033306 U28977 U28978	132847	-	TSC_hg19_v1_chr11_-_104839279 U28979 BC008060 U28976 BC017839 U28014 AK225751 Z48810 U25804 AK296081 AK304222 NM_001225	144723	-	BC030645|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##AF464191|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464192|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464193|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464194|CASP12|100506742|caspase 12 (gene/pseudogene)##AF464195|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486844|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486845|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486846|CASP12|100506742|caspase 12 (gene/pseudogene)##AF486847|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_001191016|CASP12|100506742|caspase 12 (gene/pseudogene)##NM_033306|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28977|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28978|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28979|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC008060|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28976|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##BC017839|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U28014|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK225751|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##Z48810|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##U25804|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK296081|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##AK304222|CASP4|837|caspase 4, apoptosis-related cysteine peptidase##NM_001225|CASP4|837|caspase 4, apoptosis-related cysteine peptidase	0.712364	CTCF.p2:-20:0.712
chr11	108091787	108091909	reg1032218.p1	3.678	+	TSC_hg19_v1_chr11_+_107992293 D90228 NM_000019 AK312574 BC010942 BC063853 AB590491	-99557	+	X81882 BC017838 TSC_hg19_v1_chr11_+_107880062 CU687672 AF017061 AF327710	-211819	+	TSC_hg19_v1_chr11_+_107879644 AK292575 BC063306	-212221	+	U58852 AB527441 TSC_hg19_v1_chr11_-_108093291 BC136270 AK291687 X97186	1435	-	D83243 BC050561 TSC_hg19_v1_chr11_-_108093366 BC040356 BC094769 AK290020 NM_002519	1524	-	NM_000051	1710	+	D90228|ACAT1|38|acetyl-CoA acetyltransferase 1##NM_000019|ACAT1|38|acetyl-CoA acetyltransferase 1##AK312574|ACAT1|38|acetyl-CoA acetyltransferase 1##BC010942|ACAT1|38|acetyl-CoA acetyltransferase 1##BC063853|ACAT1|38|acetyl-CoA acetyltransferase 1##X81882|CUL5|8065|cullin 5##BC017838|CUL5|8065|cullin 5##AF017061|CUL5|8065|cullin 5##AF327710|CUL5|8065|cullin 5##AK292575|CUL5|8065|cullin 5##BC063306|CUL5|8065|cullin 5##U58852|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC136270|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AK291687|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##X97186|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##D83243|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC050561|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC040356|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##BC094769|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##AK290020|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##NM_002519|NPAT|4863|nuclear protein, ataxia-telangiectasia locus##NM_000051|ATM|472|ataxia telangiectasia mutated	0.078679	
chr11	116789855	116789934	reg1039051.p2	3.678	+	X00566 TSC_hg19_v1_chr11_-_116708339 AX752114 AX752116 BC005380 NM_000039 AK292231 BC110286	-81539	-	TSC_hg19_v1_chr11_+_116700622 BC121081 BC134419 NM_000040 BC027977	-89270	+	HQ258218 HQ258399 BC113594 BC113596 BC074764 X13629 M13654 NM_000482 TSC_hg19_v1_chr11_-_116694025	-95928	-	BC128511 BC128510 NM_025164 BC121188 TSC_hg19_v1_chr11_-_116969081	179139	-	TSC_hg19_v1_chr11_+_117015002 NM_001184746 NM_001184747 NM_001184748 NM_002572 AK292973 AK307366 BC000398 BC019301 BC039721 D63390 BC001774 DQ836738 DQ836739 DQ836740 DQ836741 DQ836742 DQ836743	225139	+	TSC_hg19_v1_chr11_+_117049458 AK292501	259663	+	X00566|APOA1|335|apolipoprotein A-I##BC005380|APOA1|335|apolipoprotein A-I##NM_000039|APOA1|335|apolipoprotein A-I##AK292231|APOA1|335|apolipoprotein A-I##BC110286|APOA1|335|apolipoprotein A-I##BC121081|APOC3|345|apolipoprotein C-III##BC134419|APOC3|345|apolipoprotein C-III##NM_000040|APOC3|345|apolipoprotein C-III##BC027977|APOC3|345|apolipoprotein C-III##HQ258218|APOA4|337|apolipoprotein A-IV##HQ258399|APOA4|337|apolipoprotein A-IV##BC113594|APOA4|337|apolipoprotein A-IV##BC113596|APOA4|337|apolipoprotein A-IV##BC074764|APOA4|337|apolipoprotein A-IV##X13629|APOA4|337|apolipoprotein A-IV##M13654|APOA4|337|apolipoprotein A-IV##NM_000482|APOA4|337|apolipoprotein A-IV##BC128511|SIK3|23387|SIK family kinase 3##BC128510|SIK3|23387|SIK family kinase 3##NM_025164|SIK3|23387|SIK family kinase 3##BC121188|SIK3|23387|SIK family kinase 3##NM_001184746|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184747|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_001184748|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##NM_002572|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292973|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK307366|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC000398|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC019301|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC039721|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##D63390|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##BC001774|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836738|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836739|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836740|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836741|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836742|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##DQ836743|PAFAH1B2|5049|platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 (30kDa)##AK292501|SIDT2|51092|SID1 transmembrane family, member 2	0.0	
chr1	205180458	205180576	reg1031088.p1	3.678	+	TSC_hg19_v1_chr1_-_205091144 NM_001193272 NM_001193273 NM_005057	-89370	-	AB527310 CU691040 DQ891205 DQ894388 BC075059 BC075060 AK290137 BC037284 AK296978 TSC_hg19_v1_chr1_-_205091104 X85134 BC053856	-89450	-	BC061592 AY359081 NM_203376 AK303432	-126930	-	TSC_hg19_v1_chr1_-_205180683 AB384485 AY208850 EU832787 GQ129280 BC072406 AK298011 BC117411 BC143603 BC053627	156	-	TSC_hg19_v1_chr1_-_205180700 AY429674 BC060870 NM_015375 NM_199462	202	-	TSC_hg19_v1_chr1_+_205197073 AB007950 NM_014858 AK131419	16566	+	NM_001193272|RBBP5|5929|retinoblastoma binding protein 5##NM_001193273|RBBP5|5929|retinoblastoma binding protein 5##NM_005057|RBBP5|5929|retinoblastoma binding protein 5##DQ891205|RBBP5|5929|retinoblastoma binding protein 5##DQ894388|RBBP5|5929|retinoblastoma binding protein 5##BC075059|RBBP5|5929|retinoblastoma binding protein 5##BC075060|RBBP5|5929|retinoblastoma binding protein 5##AK290137|RBBP5|5929|retinoblastoma binding protein 5##BC037284|RBBP5|5929|retinoblastoma binding protein 5##AK296978|RBBP5|5929|retinoblastoma binding protein 5##X85134|RBBP5|5929|retinoblastoma binding protein 5##BC053856|RBBP5|5929|retinoblastoma binding protein 5##BC061592|TMEM81|388730|transmembrane protein 81##AY359081|TMEM81|388730|transmembrane protein 81##NM_203376|TMEM81|388730|transmembrane protein 81##AK303432|TMEM81|388730|transmembrane protein 81##AY208850|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##EU832787|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##GQ129280|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC072406|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AK298011|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC117411|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC143603|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC053627|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AY429674|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##BC060870|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_015375|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##NM_199462|DSTYK|25778|dual serine/threonine and tyrosine protein kinase##AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2	0.0	
chr12	122097155	122097222	reg1047109.p2	3.678	+	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	-32545	+	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	-78274	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	-78929	-	BC057760 NM_173855	10371	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	53556	+	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	134386	-	BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B##AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)	0.0	
chr12	125399069	125399249	reg1025463.p2	3.678	+	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	-50686	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	-50782	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	-50854	-	AY732488 AY819759 BC008955 BC080583 AB209782 BC000449 AK056939 AK098827 AK129749 AK291539 BC039193 BC093445 AB009010 TSC_hg19_v1_chr12_-_125399197 AK026846	14	-	NM_021009	427	-	TSC_hg19_v1_chr12_-_125473644 BC037964 NM_032656	74485	-	NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AY732488|UBC|7316|ubiquitin C##AY819759|UBC|7316|ubiquitin C##BC008955|UBC|7316|ubiquitin C##BC080583|UBC|7316|ubiquitin C##AB209782|UBC|7316|ubiquitin C##BC000449|UBC|7316|ubiquitin C##AK056939|UBC|7316|ubiquitin C##AK098827|UBC|7316|ubiquitin C##AK129749|UBC|7316|ubiquitin C##AK291539|UBC|7316|ubiquitin C##BC039193|UBC|7316|ubiquitin C##BC093445|UBC|7316|ubiquitin C##AB009010|UBC|7316|ubiquitin C##AK026846|UBC|7316|ubiquitin C##NM_021009|UBC|7316|ubiquitin C##BC037964|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37##NM_032656|DHX37|57647|DEAH (Asp-Glu-Ala-His) box polypeptide 37	0.0	
chr12	51818710	51818808	reg1011100.p1	3.678	+	AK299545 TSC_hg19_v1_chr12_+_51818596 NM_001039960 NM_004858 DQ063579	-161	+	TSC_hg19_v1_chr12_+_51785519 AK128321	-33238	+	TSC_hg19_v1_chr12_-_51785431 AK296852	-33326	-	TSC_hg19_v1_chr12_+_51818698 BC025994 AF069512 AF107099 CU693092 AL831915	25	+	TSC_hg19_v1_chr12_+_51985016 AB027567 NM_014191	166258	+	NM_001177984 AF225988 FJ611941	237815	+	AK299545|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##NM_001039960|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##NM_004858|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##DQ063579|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AK128321|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AK296852|GALNT6|11226|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6)##BC025994|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AF069512|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AF107099|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AL831915|SLC4A8|9498|solute carrier family 4, sodium bicarbonate cotransporter, member 8##AB027567|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##NM_014191|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##NM_001177984|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##AF225988|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit##FJ611941|SCN8A|6334|sodium channel, voltage gated, type VIII, alpha subunit	0.023593	
chr1	52222012	52222187	reg1034035.p2	3.678	+	TSC_hg19_v1_chr1_+_52195604 AK022554	-26445	+	TSC_hg19_v1_chr1_+_52195549 AK027707 BC025978	-26553	+	TSC_hg19_v1_chr1_+_52195487 NM_148904 NM_148905 NM_148907 AK315167	-26622	+	AY360265 AK311631 NM_001242361	121601	-	TSC_hg19_v1_chr1_-_52344010 AK299271	121935	-	TSC_hg19_v1_chr1_-_52344354 AY049784	122234	-	AK022554|OSBPL9|114883|oxysterol binding protein-like 9##AK027707|OSBPL9|114883|oxysterol binding protein-like 9##BC025978|OSBPL9|114883|oxysterol binding protein-like 9##NM_148904|OSBPL9|114883|oxysterol binding protein-like 9##NM_148905|OSBPL9|114883|oxysterol binding protein-like 9##NM_148907|OSBPL9|114883|oxysterol binding protein-like 9##AK315167|OSBPL9|114883|oxysterol binding protein-like 9##AY360265|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AK311631|NRD1|4898|nardilysin (N-arginine dibasic convertase)##NM_001242361|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AK299271|NRD1|4898|nardilysin (N-arginine dibasic convertase)##AY049784|NRD1|4898|nardilysin (N-arginine dibasic convertase)	0.0	
chr15	31750052	31750139	reg1039552.p1	3.678	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-130757	+	NM_001243538	-227046	-	GQ502181 HM135791 NM_001252020	-296667	-	AJ430383 NM_130901	197446	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	412734	-	TSC_hg19_v1_chr15_-_32162898 AK126002	412848	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr16	85270008	85270088	reg1039365.p1	3.678	+	BC093665 BC111944 AK126284 NM_198491	-123994	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-208678	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-224919	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	374973	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	376905	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	452494	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.0	
chr18	49064007	49064128	reg1029078.p1	3.678	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-340027	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-340355	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-340841	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	802474	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	803046	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2626925	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.067855	
chr1	90418795	90418896	reg1014053.p1	3.678	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-131281	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-131387	+	TSC_hg19_v1_chr1_+_90286603 AK092238 AX747423	-132246	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	41871	+	BC126439 BC126441 AY338397 NM_020063	763940	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	1068193	-	BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##AK092238|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644	0.025915	
chr2	158354410	158354590	reg1004361.p2	3.678	+	L06633 AB528875 CU690346 AF068836 BC036449 TSC_hg19_v1_chr2_-_158300602 AK312753 NM_004288	-53936	-	NM_001009959 AK296477	-170344	-	AB384578 CU693224 HQ447390 AB033015 DQ334271 BC026345 AK295051 AK295844 NM_020711	-172216	-	TSC_hg19_v1_chr2_-_158454049 AF525679 NM_001111031	99575	-	AB590288 CU692676 DQ895570 EU176205 AF525680 AF525681 AY127050 TSC_hg19_v1_chr2_-_158485239	130698	-	BC022530 NM_001111032 NM_001111033 NM_145259 TSC_hg19_v1_chr2_-_158485400	130897	-	L06633|CYTIP|9595|cytohesin 1 interacting protein##AF068836|CYTIP|9595|cytohesin 1 interacting protein##BC036449|CYTIP|9595|cytohesin 1 interacting protein##AK312753|CYTIP|9595|cytohesin 1 interacting protein##NM_004288|CYTIP|9595|cytohesin 1 interacting protein##NM_001009959|ERMN|57471|ermin, ERM-like protein##AK296477|ERMN|57471|ermin, ERM-like protein##HQ447390|ERMN|57471|ermin, ERM-like protein##AB033015|ERMN|57471|ermin, ERM-like protein##DQ334271|ERMN|57471|ermin, ERM-like protein##BC026345|ERMN|57471|ermin, ERM-like protein##AK295844|ERMN|57471|ermin, ERM-like protein##NM_020711|ERMN|57471|ermin, ERM-like protein##AF525679|ACVR1C|130399|activin A receptor, type IC##NM_001111031|ACVR1C|130399|activin A receptor, type IC##DQ895570|ACVR1C|130399|activin A receptor, type IC##EU176205|ACVR1C|130399|activin A receptor, type IC##AF525680|ACVR1C|130399|activin A receptor, type IC##AF525681|ACVR1C|130399|activin A receptor, type IC##AY127050|ACVR1C|130399|activin A receptor, type IC##BC022530|ACVR1C|130399|activin A receptor, type IC##NM_001111032|ACVR1C|130399|activin A receptor, type IC##NM_001111033|ACVR1C|130399|activin A receptor, type IC##NM_145259|ACVR1C|130399|activin A receptor, type IC	0.0	
chr2	32264852	32265016	reg1035179.p1	3.678	+	TSC_hg19_v1_chr2_-_32264863 AF226998 NM_032574 AK295755 BC015970	-66	-	AK057760 TSC_hg19_v1_chr2_-_32236109	-28828	-	TSC_hg19_v1_chr2_-_32236053 AK290753	-28870	-	TSC_hg19_v1_chr2_+_32288665 AB029006 BC150260 NM_014946 NM_199436 AJ246001	23766	+	TSC_hg19_v1_chr2_+_32390932 NM_001193513 NM_001193514 NM_001193515 NM_017964 AK055663 AK096672 AK127716 AK304225 BC066903 EF560719 EF560726 AL832755 AF173387	125995	+	AY358152 BC031555 AK292673 AK314762 AK095467 NM_001199138	224995	-	AF226998|DPY30|84661|dpy-30 homolog (C. elegans)##NM_032574|DPY30|84661|dpy-30 homolog (C. elegans)##BC015970|DPY30|84661|dpy-30 homolog (C. elegans)##AK057760|MEMO1|51072|mediator of cell motility 1##AK290753|MEMO1|51072|mediator of cell motility 1##AB029006|SPAST|6683|spastin##BC150260|SPAST|6683|spastin##NM_014946|SPAST|6683|spastin##NM_199436|SPAST|6683|spastin##AJ246001|SPAST|6683|spastin##NM_001193513|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##NM_001193514|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##NM_001193515|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##NM_017964|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AK055663|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AK096672|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AK127716|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AK304225|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##BC066903|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##EF560719|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##EF560726|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AL832755|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AF173387|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AY358152|NLRC4|58484|NLR family, CARD domain containing 4##BC031555|NLRC4|58484|NLR family, CARD domain containing 4##AK292673|NLRC4|58484|NLR family, CARD domain containing 4##AK314762|NLRC4|58484|NLR family, CARD domain containing 4##AK095467|NLRC4|58484|NLR family, CARD domain containing 4##NM_001199138|NLRC4|58484|NLR family, CARD domain containing 4	0.0	
chr2	90482083	90482246	reg1033592.p1	3.678	+	TSC_hg19_v1_chr2_+_90211706 Z69013	-270446	+	TSC_hg19_v1_chr2_+_90077732 AJ131061	-404410	+	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	-862311	-	TSC_hg19_v1_chr2_-_91847997 BC030764	1365839	-	AK097438 BC021716 NM_144705 AK296678 CU692394	5055086	+	BC000458 BC003006 AK311844 TSC_hg19_v1_chr2_+_95691453 NM_002371 NM_022438 NM_022439 NM_022440 M15800 AB529205 CR541879 X76678 X76679 X76680 X76681	5209318	+	BC070334|IGKC|3514|immunoglobulin kappa constant##AK097438|TEKT4|150483|tektin 4##BC021716|TEKT4|150483|tektin 4##NM_144705|TEKT4|150483|tektin 4##BC000458|MAL|4118|mal, T-cell differentiation protein##BC003006|MAL|4118|mal, T-cell differentiation protein##AK311844|MAL|4118|mal, T-cell differentiation protein##NM_002371|MAL|4118|mal, T-cell differentiation protein##NM_022438|MAL|4118|mal, T-cell differentiation protein##NM_022439|MAL|4118|mal, T-cell differentiation protein##NM_022440|MAL|4118|mal, T-cell differentiation protein##M15800|MAL|4118|mal, T-cell differentiation protein##CR541879|MAL|4118|mal, T-cell differentiation protein##X76678|MAL|4118|mal, T-cell differentiation protein##X76679|MAL|4118|mal, T-cell differentiation protein##X76680|MAL|4118|mal, T-cell differentiation protein##X76681|MAL|4118|mal, T-cell differentiation protein	0.0	
chr4	79513673	79513768	reg1036914.p1	3.678	+	TSC_hg19_v1_chr4_+_79472911 BC000871 AK313945	-40812	+	NM_005139 TSC_hg19_v1_chr4_+_79472790	-40950	+	BC006366 TSC_hg19_v1_chr4_-_79103287	-410435	-	TSC_hg19_v1_chr4_+_79697501 AL137661	183763	+	NM_017593 NM_198892 TSC_hg19_v1_chr4_+_79697532	183816	+	TSC_hg19_v1_chr4_+_79697552 AK292147 BC036021 DQ890994	183903	+	BC000871|ANXA3|306|annexin A3##AK313945|ANXA3|306|annexin A3##NM_005139|ANXA3|306|annexin A3##AL137661|BMP2K|55589|BMP2 inducible kinase##NM_017593|BMP2K|55589|BMP2 inducible kinase##NM_198892|BMP2K|55589|BMP2 inducible kinase##AK292147|BMP2K|55589|BMP2 inducible kinase##BC036021|BMP2K|55589|BMP2 inducible kinase##DQ890994|BMP2K|55589|BMP2 inducible kinase	0.0	
chr6	16495138	16495270	reg1033472.p1	3.678	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-256353	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-351894	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-365767	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	266493	-	NM_001190766	607284	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	786650	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.0	
chr6	43192235	43192378	reg1031586.p2	3.678	+	TSC_hg19_v1_chr6_+_43149926 BC028159	-42369	+	TSC_hg19_v1_chr6_+_43149918 AK125228 CR749511 NM_015089 CR749841	-42392	+	TSC_hg19_v1_chr6_+_43139204 AB209128 AB464198	-53013	+	TSC_hg19_v1_chr6_-_43197220 BC011683 AF040105 NM_006443 NM_199184 EU585603	4893	-	NM_032538 TSC_hg19_v1_chr6_+_43211227	18922	+	TSC_hg19_v1_chr6_+_43265994 NM_006672 NM_153320 AF097518	73691	+	BC028159|CUL9|23113|cullin 9##AK125228|CUL9|23113|cullin 9##CR749511|CUL9|23113|cullin 9##NM_015089|CUL9|23113|cullin 9##CR749841|CUL9|23113|cullin 9##AB209128|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC011683|C6orf108|10591|chromosome 6 open reading frame 108##AF040105|C6orf108|10591|chromosome 6 open reading frame 108##NM_006443|C6orf108|10591|chromosome 6 open reading frame 108##NM_199184|C6orf108|10591|chromosome 6 open reading frame 108##EU585603|C6orf108|10591|chromosome 6 open reading frame 108##NM_032538|TTBK1|84630|tau tubulin kinase 1##NM_006672|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_153320|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF097518|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7	0.075166	
chr8	107777649	107777757	reg1038013.p1	3.678	+	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	-39348	+	TSC_hg19_v1_chr8_+_107670114 AK292899 BC032710 BC019691	-107588	+	AK123667 NM_181354 TSC_hg19_v1_chr8_+_107670081 BC035484	-107715	+	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	4741	-	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	732485	-	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	1318171	-	AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AK292899|OXR1|55074|oxidation resistance 1##BC032710|OXR1|55074|oxidation resistance 1##BC019691|OXR1|55074|oxidation resistance 1##AK123667|OXR1|55074|oxidation resistance 1##NM_181354|OXR1|55074|oxidation resistance 1##BC035484|OXR1|55074|oxidation resistance 1##AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2	0.0	
chr10	70813871	70813938	reg1041115.p2	3.677	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-65369	+	BC104671 NM_004728 TSC_hg19_v1_chr10_+_70715925 BC009432 U41387 AK315585 BC008071 BC004182 BC017228 AB527408 CU675917	-97972	+	TSC_hg19_v1_chr10_+_70661097 CU674120 DQ892547 DQ895758	-152787	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	33932	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	33980	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	69987	+	NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##BC104671|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##NM_004728|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC009432|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##U41387|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##AK315585|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC008071|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC004182|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC017228|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##DQ892547|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##DQ895758|DDX50|79009|DEAD (Asp-Glu-Ala-Asp) box polypeptide 50##NM_002727|SRGN|5552|serglycin##D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.0	
chr11	118747637	118747715	reg1038602.p2	3.677	+	TSC_hg19_v1_chr11_-_118661898 NM_004397	-85742	-	TSC_hg19_v1_chr11_-_118661865 Z11685	-85797	-	TSC_hg19_v1_chr11_-_118661860 BC026228	-85817	-	AK291512 NM_001716 BC110352 X68149 AB464488	6884	+	NM_032966 X68829	16424	+	AB094091 NM_182557	33936	-	NM_004397|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##Z11685|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##BC026228|DDX6|1656|DEAD (Asp-Glu-Ala-Asp) box polypeptide 6##AK291512|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_001716|CXCR5|643|chemokine (C-X-C motif) receptor 5##BC110352|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68149|CXCR5|643|chemokine (C-X-C motif) receptor 5##NM_032966|CXCR5|643|chemokine (C-X-C motif) receptor 5##X68829|CXCR5|643|chemokine (C-X-C motif) receptor 5##AB094091|BCL9L|283149|B-cell CLL/lymphoma 9-like##NM_182557|BCL9L|283149|B-cell CLL/lymphoma 9-like	0.0	
chr1	177787327	177787450	reg1037028.p1	3.677	+	AB051534 AB161694 BC028036 NM_021165	-646807	+	AK296524 TSC_hg19_v1_chr1_+_177140093	-647310	+	TSC_hg19_v1_chr1_-_177134042 AK309094	-653313	-	AB063357 NM_033127 TSC_hg19_v1_chr1_-_177939202	151738	-	BC009106 TSC_hg19_v1_chr1_-_177939393	151982	-	TSC_hg19_v1_chr1_-_178007060 AK092831 BX538051 AB067515	219711	-	AB051534|FAM5B|57795|family with sequence similarity 5, member B##AB161694|FAM5B|57795|family with sequence similarity 5, member B##BC028036|FAM5B|57795|family with sequence similarity 5, member B##NM_021165|FAM5B|57795|family with sequence similarity 5, member B##AK296524|FAM5B|57795|family with sequence similarity 5, member B##AK309094|ASTN1|460|astrotactin 1##AB063357|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##NM_033127|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##BC009106|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AK092831|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##BX538051|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene	0.0	
chr12	39300119	39300247	reg1007143.p3	3.677	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	-800	-	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-589558	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-5124710	+	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	536816	-	AK314254 NM_005164	713659	-	BC038754 NM_001031748 BC048120 AK097445	719812	+	AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40	0.0	
chr15	71055946	71056052	reg1031185.p1	3.677	+	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	-157	-	BC016881 AL834243 NM_001008224 AK055435	-61372	-	TSC_hg19_v1_chr15_-_70878946 BC040579	-177055	-	CU675231 BC006082 BC009446 BC014018 AL833876 BC039153 TSC_hg19_v1_chr15_-_71146496 AK130092 AF443828 AF443829 AK002058 NM_018357 NM_197958	90469	-	CU693296 DQ890927 DQ894089 EU176528 AL360202 TSC_hg19_v1_chr15_-_71184737 BC027857 BC072414 AK313472 NM_020147	128692	-	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	128976	+	AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC006082|LARP6|55323|La ribonucleoprotein domain family, member 6##BC009446|LARP6|55323|La ribonucleoprotein domain family, member 6##BC014018|LARP6|55323|La ribonucleoprotein domain family, member 6##AL833876|LARP6|55323|La ribonucleoprotein domain family, member 6##BC039153|LARP6|55323|La ribonucleoprotein domain family, member 6##AK130092|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443828|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443829|LARP6|55323|La ribonucleoprotein domain family, member 6##AK002058|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_018357|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_197958|LARP6|55323|La ribonucleoprotein domain family, member 6##DQ890927|THAP10|56906|THAP domain containing 10##DQ894089|THAP10|56906|THAP domain containing 10##EU176528|THAP10|56906|THAP domain containing 10##AL360202|THAP10|56906|THAP domain containing 10##BC027857|THAP10|56906|THAP domain containing 10##BC072414|THAP10|56906|THAP domain containing 10##AK313472|THAP10|56906|THAP domain containing 10##NM_020147|THAP10|56906|THAP domain containing 10##BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49	0.0	
chr1	65859255	65859356	reg1036210.p1	3.677	+	AK296408 NM_014787 AB007942	-128876	+	TSC_hg19_v1_chr1_+_65720144 AK123450 BC051722	-139186	+	TSC_hg19_v1_chr1_+_65613971 BC040224 BC136886 BC136887 BC148270 CR456830 CU688216 DQ892294 DQ895494	-245275	+	BC140007 NM_001198683 NM_017526 TSC_hg19_v1_chr1_+_65886266	26897	+	TSC_hg19_v1_chr1_+_65886400 NM_001003679 NM_001003680 NM_002303 U43168 U66495 U66496 Y12670 AK074841 AK290208 BC056250 AK094801 AK309370 NM_001198681 BC131779 EU832353 EU832438 CR541647 CR541737 U66497	27057	+	TSC_hg19_v1_chr1_+_65991358 BC031086 NM_001198687 NM_001198688 NM_001198689	132065	+	AK296408|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##NM_014787|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##AB007942|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##AK123450|LOC645195|645195|uncharacterized LOC645195##BC051722|DNAJC6|9829|DnaJ (Hsp40) homolog, subfamily C, member 6##BC040224|AK4|205|adenylate kinase 4##BC136886|AK4|205|adenylate kinase 4##BC136887|AK4|205|adenylate kinase 4##BC148270|AK4|205|adenylate kinase 4##CR456830|AK4|205|adenylate kinase 4##DQ892294|AK4|205|adenylate kinase 4##DQ895494|AK4|205|adenylate kinase 4##BC140007|LEPROT|54741|leptin receptor overlapping transcript##NM_001198683|LEPROT|54741|leptin receptor overlapping transcript##NM_017526|LEPROT|54741|leptin receptor overlapping transcript##NM_001003679|LEPR|3953|leptin receptor##NM_001003680|LEPR|3953|leptin receptor##NM_002303|LEPR|3953|leptin receptor##U43168|LEPR|3953|leptin receptor##U66495|LEPR|3953|leptin receptor##U66496|LEPR|3953|leptin receptor##Y12670|LEPROT|54741|leptin receptor overlapping transcript##AK074841|LEPROT|54741|leptin receptor overlapping transcript##AK290208|LEPR|3953|leptin receptor##BC056250|LEPROT|54741|leptin receptor overlapping transcript##AK094801|LEPROT|54741|leptin receptor overlapping transcript##AK309370|LEPROT|54741|leptin receptor overlapping transcript##NM_001198681|LEPROT|54741|leptin receptor overlapping transcript##BC131779|LEPR|3953|leptin receptor##EU832353|LEPROT|54741|leptin receptor overlapping transcript##EU832438|LEPROT|54741|leptin receptor overlapping transcript##CR541647|LEPROT|54741|leptin receptor overlapping transcript##CR541737|LEPROT|54741|leptin receptor overlapping transcript##U66497|LEPR|3953|leptin receptor##BC031086|LEPR|3953|leptin receptor##NM_001198687|LEPR|3953|leptin receptor##NM_001198688|LEPR|3953|leptin receptor##NM_001198689|LEPR|3953|leptin receptor	0.0	
chr3	140218347	140218452	reg1014572.p2	3.677	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-564147	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-564381	+	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	-821571	-	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	178560	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	442368	+	TSC_hg19_v1_chr3_+_140770412 BC051354	552079	+	AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.0	
chr3	159603982	159604125	reg1030994.p1	3.677	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	-46194	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	-46360	+	TSC_hg19_v1_chr3_+_159481881 AK309223	-122091	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	102679	+	TSC_hg19_v1_chr3_+_159943306 NM_001168214	339284	+	BC031660 TSC_hg19_v1_chr3_+_159943777	339650	+	BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##AK309223|SCHIP1|29970|schwannomin interacting protein 1##NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80##BC031660|C3orf80|401097|chromosome 3 open reading frame 80	0.0	
chr5	142150849	142150923	reg1034879.p3	3.677	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-578	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-914	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-73315	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	631937	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	632220	-	BC015610 TSC_hg19_v1_chr5_-_142783214	632325	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr6	146362552	146362664	reg1039942.p1	3.677	+	AK308550 NM_000838 NM_001114329 L76631	-13759	+	TSC_hg19_v1_chr6_-_146285558 CR749290	-77046	-	TSC_hg19_v1_chr6_-_146285235 AK075318 AY163808 NM_001042683 NM_173082	-77358	-	BC015061 NM_006834 TSC_hg19_v1_chr6_+_146864864	502261	+	TSC_hg19_v1_chr6_+_146864968 AK312202 U71127 AB529170 CU677203 DQ892882 DQ896131 AF498958 BT020016 U59878	502400	+	AK097570 NM_024694 AL832192	557529	+	AK308550|GRM1|2911|glutamate receptor, metabotropic 1##NM_000838|GRM1|2911|glutamate receptor, metabotropic 1##NM_001114329|GRM1|2911|glutamate receptor, metabotropic 1##L76631|GRM1|2911|glutamate receptor, metabotropic 1##CR749290|SHPRH|257218|SNF2 histone linker PHD RING helicase##AK075318|SHPRH|257218|SNF2 histone linker PHD RING helicase##AY163808|SHPRH|257218|SNF2 histone linker PHD RING helicase##NM_001042683|SHPRH|257218|SNF2 histone linker PHD RING helicase##NM_173082|SHPRH|257218|SNF2 histone linker PHD RING helicase##BC015061|RAB32|10981|RAB32, member RAS oncogene family##NM_006834|RAB32|10981|RAB32, member RAS oncogene family##AK312202|RAB32|10981|RAB32, member RAS oncogene family##U71127|RAB32|10981|RAB32, member RAS oncogene family##DQ892882|RAB32|10981|RAB32, member RAS oncogene family##DQ896131|RAB32|10981|RAB32, member RAS oncogene family##AF498958|RAB32|10981|RAB32, member RAS oncogene family##BT020016|RAB32|10981|RAB32, member RAS oncogene family##U59878|RAB32|10981|RAB32, member RAS oncogene family##AK097570|C6orf103|79747|chromosome 6 open reading frame 103##NM_024694|C6orf103|79747|chromosome 6 open reading frame 103##AL832192|C6orf103|79747|chromosome 6 open reading frame 103	0.430404	CTCF.p2:0:0.430
chr6	27533649	27533751	reg1042421.p1	3.677	+	TSC_hg19_v1_chr6_-_27440879 BC022992 AK123011 AK312804 NM_007149	-92999	-	TSC_hg19_v1_chr6_+_27356537 NM_001076781 AK092633 AK294965 AX747641 BC132797	-177145	+	AF352327 AF336874 BC107050 NM_032030	-241142	+	EU446971 TSC_hg19_v1_chr6_-_27775708 NM_003519 AK312114 BC093759 BC093761	242023	-	BC112254 BC112256 TSC_hg19_v1_chr6_+_27775950 AK311766 BC062305 NM_003509 HQ258047	242241	+	BC007518 TSC_hg19_v1_chr6_+_27777828 AK311991 NM_003536 EU446975 BC096128 BC096129 BC096130 BC143046 BC148243 BC148250	244082	+	BC022992|ZNF184|7738|zinc finger protein 184##AK123011|ZNF184|7738|zinc finger protein 184##AK312804|ZNF184|7738|zinc finger protein 184##NM_007149|ZNF184|7738|zinc finger protein 184##NM_001076781|ZNF391|346157|zinc finger protein 391##AK092633|ZNF391|346157|zinc finger protein 391##AK294965|ZNF391|346157|zinc finger protein 391##BC132797|ZNF391|346157|zinc finger protein 391##AF352327|FKSG83|83954|FKSG83##AF336874|FKSG83|83954|FKSG83##BC107050|FKSG83|83954|FKSG83##NM_032030|FKSG83|83954|FKSG83##EU446971|HIST1H2BL|8340|histone cluster 1, H2bl##NM_003519|HIST1H2BL|8340|histone cluster 1, H2bl##AK312114|HIST1H2BL|8340|histone cluster 1, H2bl##BC093759|HIST1H2BL|8340|histone cluster 1, H2bl##BC093761|HIST1H2BL|8340|histone cluster 1, H2bl##BC112254|HIST1H2AI|8329|histone cluster 1, H2ai##BC112256|HIST1H2AI|8329|histone cluster 1, H2ai##AK311766|HIST1H2AI|8329|histone cluster 1, H2ai##BC062305|HIST1H3F|8968|histone cluster 1, H3f##NM_003509|HIST1H2AI|8329|histone cluster 1, H2ai##HQ258047|HIST1H2AM|8336|histone cluster 1, H2am##BC007518|HIST1H3H|8357|histone cluster 1, H3h##AK311991|HIST1H3H|8357|histone cluster 1, H3h##NM_003536|HIST1H3H|8357|histone cluster 1, H3h##EU446975|HIST1H3H|8357|histone cluster 1, H3h##BC096128|HIST1H3H|8357|histone cluster 1, H3h##BC096129|HIST1H3H|8357|histone cluster 1, H3h##BC096130|HIST1H3H|8357|histone cluster 1, H3h##BC143046|HIST1H3H|8357|histone cluster 1, H3h##BC148243|HIST1H3H|8357|histone cluster 1, H3h##BC148250|HIST1H3H|8357|histone cluster 1, H3h	0.793077	CTCF.p2:-5:0.793
chr9	100321492	100321658	reg1036022.p1	3.677	+	TSC_hg19_v1_chr9_+_100263947 BC002660 NM_003275	-57637	+	NM_001166116 AK314533	-58113	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	-147196	+	TSC_hg19_v1_chr9_-_100395642 AK094043 AK291199 AX748426 BC035604 BX648493 BX538308 AK128615	74054	-	NM_002486 AK312807 TSC_hg19_v1_chr9_+_100395897 D32002	74251	+	NM_139246	74386	-	BC002660|TMOD1|7111|tropomodulin 1##NM_003275|TMOD1|7111|tropomodulin 1##NM_001166116|TMOD1|7111|tropomodulin 1##AK314533|TMOD1|7111|tropomodulin 1##AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7##AK094043|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK291199|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BC035604|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX648493|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX538308|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK128615|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##NM_002486|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##AK312807|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##D32002|NCBP1|4686|nuclear cap binding protein subunit 1, 80kDa##NM_139246|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2	0.0	
chr9	130865980	130866078	reg1032259.p1	3.677	+	NM_052901 TSC_hg19_v1_chr9_+_130860820 BC103930 BC103931 BC103932 BC103933 AJ619989 AJ619992 NM_001006643	-5204	+	BC089448 TSC_hg19_v1_chr9_+_130860793 AK290705	-5248	+	NM_001006642 AJ619991	-11895	+	TSC_hg19_v1_chr9_-_130889968 BC009397	23944	-	BC009456 AB463194 AM392565 DQ891904 DQ895090 TSC_hg19_v1_chr9_-_130890006 AK223520	23970	-	AK024100 TSC_hg19_v1_chr9_-_130890009	23979	-	NM_052901|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103930|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103931|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103932|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC103933|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619989|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619992|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006643|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC089448|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AK290705|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006642|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##BC009397|PTGES2|80142|prostaglandin E synthase 2##BC009456|PTGES2|80142|prostaglandin E synthase 2##AM392565|PTGES2|80142|prostaglandin E synthase 2##DQ891904|PTGES2|80142|prostaglandin E synthase 2##DQ895090|PTGES2|80142|prostaglandin E synthase 2##AK223520|PTGES2|80142|prostaglandin E synthase 2##AK024100|PTGES2|80142|prostaglandin E synthase 2	0.712891	CTCF.p2:12:0.627
chr11	64620706	64620778	reg1033911.p1	3.676	+	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	-8653	-	AJ297488 AJ297489 NM_130803 NM_130804	-41977	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	-42548	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	25240	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	25412	-	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	26419	-	AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I##AY007161|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1	0.0	
chr14	36497548	36497651	reg1036718.p1	3.676	+	TSC_hg19_v1_chr14_+_36295599 NM_032352 AY827074 BC006250 AK297106 AK310359 AK315424	-201996	+	TSC_hg19_v1_chr14_-_36278433 AY596970 AY596971 NM_014990 NM_194301	-219204	-	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	-219452	-	AB463855 CU677729 BX248287 TSC_hg19_v1_chr14_-_36789806 AF208857 BC016821 AK293473 BC005197 AB038523 AK315290 NM_001144891 NM_016586	292245	-	TSC_hg19_v1_chr14_-_36982983 BC042093 NM_001101341	485383	-	NM_003317 U33749	491303	-	NM_032352|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY827074|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##BC006250|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK297106|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK310359|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AK315424|BRMS1L|84312|breast cancer metastasis-suppressor 1-like##AY596970|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AY596971|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_014990|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##NM_194301|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BX248287|MBIP|51562|MAP3K12 binding inhibitory protein 1##AF208857|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC016821|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK293473|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC005197|MBIP|51562|MAP3K12 binding inhibitory protein 1##AB038523|MBIP|51562|MAP3K12 binding inhibitory protein 1##AK315290|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_001144891|MBIP|51562|MAP3K12 binding inhibitory protein 1##NM_016586|MBIP|51562|MAP3K12 binding inhibitory protein 1##BC042093|SFTA3|253970|surfactant associated 3##NM_001101341|SFTA3|253970|surfactant associated 3##NM_003317|NKX2-1|7080|NK2 homeobox 1##U33749|NKX2-1|7080|NK2 homeobox 1	0.04627	
chr16	47050705	47050834	reg1040228.p1	3.676	+	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	-43174	-	CU677459 AF011793 AJ001309 TSC_hg19_v1_chr16_-_47007561	-43247	-	TSC_hg19_v1_chr16_-_47005340 Y13350	-45421	-	AY358718 BC108727 TSC_hg19_v1_chr16_-_47177852 BC098380	127077	-	TSC_hg19_v1_chr16_-_47177902 AK074937 NM_001201477 NM_018092	127153	-	TSC_hg19_v1_chr16_-_47494975 BC006321 DQ893514 DQ896493 AF503339 AK027596	444096	-	AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AJ001309|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AY358718|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC108727|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC098380|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##AK074937|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_001201477|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_018092|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC006321|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ893514|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ896493|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF503339|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK027596|ITFG1|81533|integrin alpha FG-GAP repeat containing 1	0.0	
chr17	60797886	60797977	reg1039060.p2	3.676	+	TSC_hg19_v1_chr17_+_60705060 BC150212 AF107292 AB384513	-92824	+	BC146647 TSC_hg19_v1_chr17_+_60705048 AF134838	-92886	+	TSC_hg19_v1_chr17_+_60704751 AB014609 BC153884 NM_006039	-93174	+	NM_001100875 BC035021	86080	-	AK122947 AK093076 AX747906 BX648705 NM_152598	87746	-	NM_025185	288966	+	BC150212|MRC2|9902|mannose receptor, C type 2##AF107292|MRC2|9902|mannose receptor, C type 2##BC146647|MRC2|9902|mannose receptor, C type 2##AF134838|MRC2|9902|mannose receptor, C type 2##AB014609|MRC2|9902|mannose receptor, C type 2##BC153884|MRC2|9902|mannose receptor, C type 2##NM_006039|MRC2|9902|mannose receptor, C type 2##NM_001100875|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC035021|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2	0.899048	CTCF.p2:48:0.899
chr2	238807450	238807622	reg1035808.p2	3.676	+	NM_005855 TSC_hg19_v1_chr2_+_238768265 AJ001014 BC000548 DQ891905 DQ895091 AY265457 CR542032 CR542044	-39284	+	NM_001080504 TSC_hg19_v1_chr2_+_238707424 BX648107	-100116	+	TSC_hg19_v1_chr2_+_238601052 EU832771 EU832772 GQ129315 GQ129316	-206461	+	NM_080678 TSC_hg19_v1_chr2_+_238875655 AK002119 AK293334 AK297502 AK303094	68088	+	TSC_hg19_v1_chr2_+_238875673 AK290063	68144	+	TSC_hg19_v1_chr2_+_238875689 BC010549 AK294107	68167	+	NM_005855|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##AJ001014|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##BC000548|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##DQ891905|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##DQ895091|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##AY265457|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##CR542032|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##CR542044|RAMP1|10267|receptor (G protein-coupled) activity modifying protein 1##NM_001080504|RBM44|375316|RNA binding motif protein 44##BX648107|RBM44|375316|RNA binding motif protein 44##EU832771|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##EU832772|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129315|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##GQ129316|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_080678|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK293334|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK297502|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK303094|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK290063|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##BC010549|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK294107|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)	0.0	
chr3	49894117	49894250	reg1033330.p1	3.676	+	AB451320 AB451449 AB590668 CU674148 EF036504 TSC_hg19_v1_chr3_-_49894001 AK225873 BC000310 BC019283 AK292172 NM_005879 U77845 AK295780	-238	-	TSC_hg19_v1_chr3_-_49851387 NM_003335 L13852	-42794	-	CU675375 BT007026 DQ893307 DQ893707 TSC_hg19_v1_chr3_-_49851326 BC006378	-42912	-	TSC_hg19_v1_chr3_-_49907340 BC019256 BC000497 BC001921 BC005828 BC017363 AK297437 BX647074 AK299953 AL136697 AK074899 AK297258 AK295588 AK075294 AK074856 NM_024046 AK315525	13162	-	TSC_hg19_v1_chr3_-_49941304 NM_001244937 NM_002447	47119	-	BC047022 BC009459 AK092018 AK307140 AX747314 AK074404 TSC_hg19_v1_chr3_-_49967263 BC006299 AK315630 NM_001142501 NM_032355	73136	-	AB451320|TRAIP|10293|TRAF interacting protein##AB451449|TRAIP|10293|TRAF interacting protein##EF036504|TRAIP|10293|TRAF interacting protein##AK225873|TRAIP|10293|TRAF interacting protein##BC000310|TRAIP|10293|TRAF interacting protein##BC019283|TRAIP|10293|TRAF interacting protein##AK292172|TRAIP|10293|TRAF interacting protein##NM_005879|TRAIP|10293|TRAF interacting protein##U77845|TRAIP|10293|TRAF interacting protein##AK295780|TRAIP|10293|TRAF interacting protein##NM_003335|UBA7|7318|ubiquitin-like modifier activating enzyme 7##L13852|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BT007026|UBA7|7318|ubiquitin-like modifier activating enzyme 7##DQ893307|UBA7|7318|ubiquitin-like modifier activating enzyme 7##DQ893707|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BC006378|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BC019256|CAMKV|79012|CaM kinase-like vesicle-associated##BC000497|CAMKV|79012|CaM kinase-like vesicle-associated##BC001921|CAMKV|79012|CaM kinase-like vesicle-associated##BC005828|CAMKV|79012|CaM kinase-like vesicle-associated##BC017363|CAMKV|79012|CaM kinase-like vesicle-associated##AK297437|CAMKV|79012|CaM kinase-like vesicle-associated##BX647074|CAMKV|79012|CaM kinase-like vesicle-associated##AK299953|CAMKV|79012|CaM kinase-like vesicle-associated##AL136697|CAMKV|79012|CaM kinase-like vesicle-associated##AK074899|CAMKV|79012|CaM kinase-like vesicle-associated##AK297258|CAMKV|79012|CaM kinase-like vesicle-associated##AK295588|CAMKV|79012|CaM kinase-like vesicle-associated##AK075294|CAMKV|79012|CaM kinase-like vesicle-associated##AK074856|CAMKV|79012|CaM kinase-like vesicle-associated##NM_024046|CAMKV|79012|CaM kinase-like vesicle-associated##AK315525|CAMKV|79012|CaM kinase-like vesicle-associated##NM_001244937|MST1R|4486|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)##NM_002447|MST1R|4486|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)##BC047022|MON1A|84315|MON1 homolog A (yeast)##BC009459|MON1A|84315|MON1 homolog A (yeast)##AK092018|MON1A|84315|MON1 homolog A (yeast)##AK307140|MON1A|84315|MON1 homolog A (yeast)##AK074404|MON1A|84315|MON1 homolog A (yeast)##BC006299|MON1A|84315|MON1 homolog A (yeast)##AK315630|MON1A|84315|MON1 homolog A (yeast)##NM_001142501|MON1A|84315|MON1 homolog A (yeast)##NM_032355|MON1A|84315|MON1 homolog A (yeast)	0.0106	
chr7	107852013	107852111	reg1031739.p1	3.676	+	BC142619 BC140804 BC144591 AF028816 AK300385 NM_007356	-81270	-	AB384752 TSC_hg19_v1_chr7_-_107643594 BC113455 M61916 BX648251 AK303501 AK309921 AK307611 BC044633 BC052598 NM_002291	-208457	-	AK300077 TSC_hg19_v1_chr7_+_107531630 AK225289 AK310220 AB209703 BC018648 BC018696 J03620 AB529125 CU676276	-320406	+	AJ001057 AB385311 NM_001037132	28490	-	TSC_hg19_v1_chr7_-_108096830 BC114570 BC115736 AB002341 BX538010 AK299870 BC098401 NM_001193582 NM_001193583 NM_001193584 NM_005010	244867	-	TSC_hg19_v1_chr7_-_108142934 BC005203 AK002115	290910	-	BC142619|LAMB4|22798|laminin, beta 4##BC140804|LAMB4|22798|laminin, beta 4##BC144591|LAMB4|22798|laminin, beta 4##AF028816|LAMB4|22798|laminin, beta 4##AK300385|LAMB4|22798|laminin, beta 4##NM_007356|LAMB4|22798|laminin, beta 4##BC113455|LAMB1|3912|laminin, beta 1##M61916|LAMB1|3912|laminin, beta 1##BX648251|LAMB1|3912|laminin, beta 1##AK303501|LAMB1|3912|laminin, beta 1##AK309921|LAMB1|3912|laminin, beta 1##AK307611|LAMB1|3912|laminin, beta 1##BC044633|LAMB1|3912|laminin, beta 1##BC052598|LAMB1|3912|laminin, beta 1##NM_002291|LAMB1|3912|laminin, beta 1##AK300077|DLD|1738|dihydrolipoamide dehydrogenase##AK225289|DLD|1738|dihydrolipoamide dehydrogenase##AK310220|DLD|1738|dihydrolipoamide dehydrogenase##AB209703|DLD|1738|dihydrolipoamide dehydrogenase##BC018648|DLD|1738|dihydrolipoamide dehydrogenase##BC018696|DLD|1738|dihydrolipoamide dehydrogenase##J03620|DLD|1738|dihydrolipoamide dehydrogenase##AJ001057|NRCAM|4897|neuronal cell adhesion molecule##NM_001037132|NRCAM|4897|neuronal cell adhesion molecule##BC114570|NRCAM|4897|neuronal cell adhesion molecule##BC115736|NRCAM|4897|neuronal cell adhesion molecule##AB002341|NRCAM|4897|neuronal cell adhesion molecule##BX538010|NRCAM|4897|neuronal cell adhesion molecule##AK299870|NRCAM|4897|neuronal cell adhesion molecule##BC098401|NRCAM|4897|neuronal cell adhesion molecule##NM_001193582|NRCAM|4897|neuronal cell adhesion molecule##NM_001193583|NRCAM|4897|neuronal cell adhesion molecule##NM_001193584|NRCAM|4897|neuronal cell adhesion molecule##NM_005010|NRCAM|4897|neuronal cell adhesion molecule##BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8##AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8	0.0	
chr8	42948798	42948916	reg1001771.p2	3.676	+	AK027009 TSC_hg19_v1_chr8_+_42948660	-190	+	TSC_hg19_v1_chr8_+_42948657 NM_032237	-204	+	TSC_hg19_v1_chr8_+_42911465 NM_002027 BC037295 AK292121 L00634 BC084566 L10413 AB590505 BT009854 BC017029	-37389	+	TSC_hg19_v1_chr8_+_42995606 NM_152419	46723	+	TSC_hg19_v1_chr8_+_42995639 AK304441	46776	+	TSC_hg19_v1_chr8_+_42995654 BC042037	46790	+	NM_032237|SGK196|84197|protein kinase-like protein SgK196##NM_002027|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC037295|FNTA|2339|farnesyltransferase, CAAX box, alpha##AK292121|FNTA|2339|farnesyltransferase, CAAX box, alpha##L00634|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC084566|FNTA|2339|farnesyltransferase, CAAX box, alpha##L10413|FNTA|2339|farnesyltransferase, CAAX box, alpha##BT009854|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC017029|FNTA|2339|farnesyltransferase, CAAX box, alpha##NM_152419|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase	0.0	
chr1	107538594	107538728	reg1033418.p1	3.675	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-3246159	+	NM_001008221 AK292341	-3246383	+	AK292341 NM_001008221	-3299590	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	60704	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	144081	+	AB023193 TSC_hg19_v1_chr1_+_107683657	144943	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.0	
chr1	202630243	202630380	reg1019460.p1	3.675	+	AK094430 NM_001136504	-17731	-	AB588820 NM_001197131 TSC_hg19_v1_chr1_+_202509319	-121031	+	AB050641 AB050642 NM_032103 NM_032104	-198441	+	BC100814 BC100815 BC100816 BC100817 AK090672 NM_177402 TSC_hg19_v1_chr1_-_202679575	49188	-	TSC_hg19_v1_chr1_-_202776401 AK122752	146133	-	TSC_hg19_v1_chr1_-_202777541 AJ132440	147216	-	AK094430|SYT2|127833|synaptotagmin II##NM_001136504|SYT2|127833|synaptotagmin II##AB588820|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_001197131|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050641|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##AB050642|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032103|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##NM_032104|PPP1R12B|4660|protein phosphatase 1, regulatory subunit 12B##BC100814|SYT2|127833|synaptotagmin II##BC100815|SYT2|127833|synaptotagmin II##BC100816|SYT2|127833|synaptotagmin II##BC100817|SYT2|127833|synaptotagmin II##AK090672|SYT2|127833|synaptotagmin II##NM_177402|SYT2|127833|synaptotagmin II##AK122752|KDM5B|10765|lysine (K)-specific demethylase 5B##AJ132440|KDM5B|10765|lysine (K)-specific demethylase 5B	0.429824	CTCF.p2:-29:0.430
chr1	46509405	46509526	reg1037882.p2	3.675	+	TSC_hg19_v1_chr1_+_46379267 AK027123 AK309510	-130203	+	TSC_hg19_v1_chr1_+_46269283 AB047005 NM_015112 BC065499	-240167	+	BC032544 TSC_hg19_v1_chr1_-_46216325 AK023880 NM_001145349 NM_005897	-293066	-	TSC_hg19_v1_chr1_-_46598298 CR749649 BC021622 NM_003629 EU832448 EU832531 BX537388 BC094768 AK313726 NM_001114172	89013	-	NM_005727 AK313774	131288	+	TSC_hg19_v1_chr1_+_46646203 BC007290 BC000695 BC013404 AF065388 AF133425	136745	+	AK027123|MAST2|23139|microtubule associated serine/threonine kinase 2##AK309510|MAST2|23139|microtubule associated serine/threonine kinase 2##AB047005|MAST2|23139|microtubule associated serine/threonine kinase 2##NM_015112|MAST2|23139|microtubule associated serine/threonine kinase 2##BC065499|MAST2|23139|microtubule associated serine/threonine kinase 2##BC032544|IPP|3652|intracisternal A particle-promoted polypeptide##AK023880|IPP|3652|intracisternal A particle-promoted polypeptide##NM_001145349|IPP|3652|intracisternal A particle-promoted polypeptide##NM_005897|IPP|3652|intracisternal A particle-promoted polypeptide##CR749649|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BC021622|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_003629|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##EU832448|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##EU832531|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BX537388|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##BC094768|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##AK313726|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_001114172|PIK3R3|8503|phosphoinositide-3-kinase, regulatory subunit 3 (gamma)##NM_005727|TSPAN1|10103|tetraspanin 1##AK313774|TSPAN1|10103|tetraspanin 1##BC007290|TSPAN1|10103|tetraspanin 1##BC000695|TSPAN1|10103|tetraspanin 1##BC013404|TSPAN1|10103|tetraspanin 1##AF065388|TSPAN1|10103|tetraspanin 1##AF133425|TSPAN1|10103|tetraspanin 1	0.0	
chr15	65185980	65186160	reg1030455.p1	3.675	+	AK311036 NM_001195059 NM_025201 TSC_hg19_v1_chr15_+_65134113 AK096203 BC008744 AF494534	-51963	+	BC137503 BC137504 TSC_hg19_v1_chr15_-_65117814 BC018978 AK026345 EU084033 NM_025049 AB185926 AB185927	-68235	-	BC131612 BC148208 AY369207 NM_194272 TSC_hg19_v1_chr15_-_65067789 AK127873	-118324	-	TSC_hg19_v1_chr15_+_65204100 AK098736 NM_182703 AK075298 BC110610 AK307698	18019	+	TSC_hg19_v1_chr15_-_65281780 AF212231 NM_001127889	95739	-	TSC_hg19_v1_chr15_-_65282170 AK172849 AK225527 AK312943 BC000244	96064	-	NM_001195059|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##NM_025201|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK096203|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC008744|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AF494534|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC137503|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC137504|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC018978|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AK026345|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##EU084033|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_025049|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185926|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185927|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC131612|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC148208|RBPMS2|348093|RNA binding protein with multiple splicing 2##AY369207|RBPMS2|348093|RNA binding protein with multiple splicing 2##NM_194272|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK127873|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK098736|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##NM_182703|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK075298|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##BC110610|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK307698|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	0.0	
chr19	52901095	52901232	reg1033294.p1	3.675	+	AK056552 AL833325 NM_032423	-53	+	TSC_hg19_v1_chr19_-_52900989 BX537909 AK097590	-161	-	NM_001145434 AK092566 AX747602 TSC_hg19_v1_chr19_+_52873197 BC056265 BC058819 AK297834 BC013198 AF088022	-27972	+	AB086839 AB086840 AB091368 AB091369 NM_001143938 NM_001143939	33503	+	AB091373 AB091374 AK299106 NM_001099694 TSC_hg19_v1_chr19_+_52956836 AL833487 AB091376 AB091375	55664	+	CR749856 TSC_hg19_v1_chr19_+_53030941 NM_001039886	129766	+	AK056552|ZNF528|84436|zinc finger protein 528##AL833325|ZNF528|84436|zinc finger protein 528##NM_032423|ZNF528|84436|zinc finger protein 528##BX537909|LOC284373|284373|uncharacterized LOC284373##AK097590|LOC284373|284373|uncharacterized LOC284373##NM_001145434|ZNF880|400713|zinc finger protein 880##BC056265|ZNF880|400713|zinc finger protein 880##BC058819|ZNF880|400713|zinc finger protein 880##AK297834|ZNF880|400713|zinc finger protein 880##BC013198|ZNF880|400713|zinc finger protein 880##AF088022|ZNF880|400713|zinc finger protein 880##AB086839|ZNF534|147658|zinc finger protein 534##AB086840|ZNF534|147658|zinc finger protein 534##NM_001143938|ZNF534|147658|zinc finger protein 534##NM_001143939|ZNF534|147658|zinc finger protein 534##AB091373|ZNF578|147660|zinc finger protein 578##AB091374|ZNF578|147660|zinc finger protein 578##AK299106|ZNF578|147660|zinc finger protein 578##NM_001099694|ZNF578|147660|zinc finger protein 578##AB091376|ZNF578|147660|zinc finger protein 578##AB091375|ZNF578|147660|zinc finger protein 578##CR749856|ZNF808|388558|zinc finger protein 808##NM_001039886|ZNF808|388558|zinc finger protein 808	0.0	
chr2	133736743	133736877	reg1036146.p1	3.675	+	AK124659 TSC_hg19_v1_chr2_-_133539761	-197116	-	NM_001077427 AK309668	-307700	-	NM_144586	-308330	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	442544	-	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	589228	-	NM_002410 D17716 AF113921	1275075	+	AK124659|NCKAP5|344148|NCK-associated protein 5##NM_001077427|LYPD1|116372|LY6/PLAUR domain containing 1##AK309668|LYPD1|116372|LY6/PLAUR domain containing 1##NM_144586|LYPD1|116372|LY6/PLAUR domain containing 1##AK092189|NCKAP5|344148|NCK-associated protein 5##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase	0.0	
chr21	35734423	35734497	reg1005508.p2	3.675	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	-288531	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	-288619	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-446368	-	AF302095 DQ192290 NM_172201 BC112087 BC093892	1886	+	NM_058182 TSC_hg19_v1_chr21_+_35747813 AY081143 AY081144 BC045820 AK092693 BC015596 BC064410 AK057880	13365	+	AY789480 NM_001127670 EU008570	93612	-	AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_058182|FAM165B|54065|family with sequence similarity 165, member B##AY081143|FAM165B|54065|family with sequence similarity 165, member B##AY081144|FAM165B|54065|family with sequence similarity 165, member B##BC045820|FAM165B|54065|family with sequence similarity 165, member B##AK092693|FAM165B|54065|family with sequence similarity 165, member B##BC015596|FAM165B|54065|family with sequence similarity 165, member B##BC064410|FAM165B|54065|family with sequence similarity 165, member B##AK057880|FAM165B|54065|family with sequence similarity 165, member B##AY789480|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##NM_001127670|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1##EU008570|KCNE1|3753|potassium voltage-gated channel, Isk-related family, member 1	0.0	
chr3	41935802	41935982	reg1009109.p2	3.675	+	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	-694868	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	-694943	+	TSC_hg19_v1_chr3_+_40566471 BC101619 BC113415 CR749268	-1369392	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	67667	-	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	196941	+	TSC_hg19_v1_chr3_+_42190749 AK294221	254856	+	AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC101619|ZNF621|285268|zinc finger protein 621##BC113415|ZNF621|285268|zinc finger protein 621##CR749268|ZNF621|285268|zinc finger protein 621##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1	0.0	
chr3	9292041	9292155	reg1031774.p3	3.675	+	TSC_hg19_v1_chr3_-_9291320 NM_001033117 NM_014850 BC140004 AK054831	-780	-	AB007871 AB384477 AK094355 AF427144 TSC_hg19_v1_chr3_-_9290871 AF464189	-1354	-	AB528316 DQ891197 DQ894380 TSC_hg19_v1_chr3_-_9005128 AY004333 BC001302 AK222771 AF169796 AK023075 NM_020165	-286968	-	TSC_hg19_v1_chr3_+_9404750 NM_001114092 NM_015453 AK023263 BC001622 AK001680 BC010421	112677	+	TSC_hg19_v1_chr3_-_9438337 BC036698 BC052961	146240	-	AK093640 TSC_hg19_v1_chr3_-_9439124 AL110136	147049	-	NM_001033117|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##NM_014850|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##BC140004|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK054831|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AB007871|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AK094355|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF427144|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##AF464189|SRGAP3|9901|SLIT-ROBO Rho GTPase activating protein 3##DQ891197|RAD18|56852|RAD18 homolog (S. cerevisiae)##DQ894380|RAD18|56852|RAD18 homolog (S. cerevisiae)##AY004333|RAD18|56852|RAD18 homolog (S. cerevisiae)##BC001302|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK222771|RAD18|56852|RAD18 homolog (S. cerevisiae)##AF169796|RAD18|56852|RAD18 homolog (S. cerevisiae)##AK023075|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_020165|RAD18|56852|RAD18 homolog (S. cerevisiae)##NM_001114092|THUMPD3|25917|THUMP domain containing 3##NM_015453|THUMPD3|25917|THUMP domain containing 3##AK023263|THUMPD3|25917|THUMP domain containing 3##BC001622|THUMPD3|25917|THUMP domain containing 3##AK001680|THUMPD3|25917|THUMP domain containing 3##BC010421|THUMPD3|25917|THUMP domain containing 3##BC036698|LOC440944|440944|uncharacterized LOC440944##BC052961|LOC440944|440944|uncharacterized LOC440944##AK093640|LOC440944|440944|uncharacterized LOC440944##AL110136|LOC440944|440944|uncharacterized LOC440944	0.88523	CTCF.p2:27:0.885
chr5	107148138	107148274	reg1029619.p1	3.675	+	AK308672 NM_001962 U26403	-141616	-	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-4249725	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4553749	+	TSC_hg19_v1_chr5_-_107717106 AK126722	568924	-	BC063316 NM_001163315	569592	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	915774	-	AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AB593118|HP07349|100652853|uncharacterized protein HP07349	0.013838	
chr9	99429033	99429165	reg1011426.p1	3.675	+	TSC_hg19_v1_chr9_-_99417600 BC136501 BC136503 NM_153698	-11489	-	TSC_hg19_v1_chr9_-_99382126 AF064104 AF064105 NM_003671 NM_033331	-46979	-	TSC_hg19_v1_chr9_-_99329110 AK126388 NM_001077181	-99952	-	AB023189 NM_014930 TSC_hg19_v1_chr9_-_99540352 BC036676 BC068587 BC058022 AK292600	111254	-	BC137073 AK131468 NM_001001662	187287	-	NM_001045477 NM_001170741	262186	+	BC136501|C9orf21|195827|chromosome 9 open reading frame 21##BC136503|C9orf21|195827|chromosome 9 open reading frame 21##NM_153698|C9orf21|195827|chromosome 9 open reading frame 21##AF064104|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##AF064105|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_003671|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_033331|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##AB023189|ZNF510|22869|zinc finger protein 510##NM_014930|ZNF510|22869|zinc finger protein 510##BC036676|ZNF510|22869|zinc finger protein 510##BC068587|ZNF510|22869|zinc finger protein 510##BC058022|ZNF510|22869|zinc finger protein 510##AK292600|ZNF510|22869|zinc finger protein 510##BC137073|ZNF782|158431|zinc finger protein 782##AK131468|ZNF782|158431|zinc finger protein 782##NM_001001662|ZNF782|158431|zinc finger protein 782##NM_001045477|FAM22G|441457|family with sequence similarity 22, member G##NM_001170741|FAM22G|441457|family with sequence similarity 22, member G	0.0	
chr10	33294423	33294578	reg1036434.p1	3.674	+	TSC_hg19_v1_chr10_-_33247203 NM_002211	-47263	-	TSC_hg19_v1_chr10_-_33247146 BC020057 AK291697 BX537407	-47361	-	TSC_hg19_v1_chr10_-_33246826 NM_133376	-47666	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	328953	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	329314	-	TSC_hg19_v1_chr10_-_33623996 BX648025	329498	-	NM_002211|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BC020057|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##AK291697|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##BX537407|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##NM_133376|ITGB1|3688|integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12)##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##BX648025|NRP1|8829|neuropilin 1	0.0	
chr10	54074305	54074386	reg1036214.p1	3.674	+	TSC_hg19_v1_chr10_+_54074042 NM_012242 AK314902 BC001539 AY359005 AF127563 AF177394 AB528499 CU674754 DQ892222 DQ895421	-230	+	CU688440 TSC_hg19_v1_chr10_-_53459366 AY130299 BC028239 AK222574 AL136747 AK314318 NM_015235	-614998	-	NM_006258 TSC_hg19_v1_chr10_+_52834263 AK313416 EF560730 BC127090 Y07512 BC062688 AB590766 GQ129235 GQ129236	-1240054	+	AY826184 AB527950 AF360991 BC096179 BC096180 BC096181 BC096182 BC069338 NM_000242 X15422	457081	-	AL834134 AY029205 AY029237 EU718480 EU718481 EU718482 NM_001142763 NM_001142764 NM_001142765 NM_001142766 NM_001142767 NM_001142768 NM_001142769 NM_001142770 NM_001142771 NM_001142772 NM_001142773 NM_033056	2486653	-	NM_001190478 TSC_hg19_v1_chr10_+_57358800	3284429	+	NM_012242|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AK314902|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##BC001539|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY359005|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF127563|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AF177394|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ892222|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##DQ895421|DKK1|22943|dickkopf 1 homolog (Xenopus laevis)##AY130299|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##BC028239|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK222574|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AL136747|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##AK314318|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_015235|CSTF2T|23283|cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant##NM_006258|PRKG1|5592|protein kinase, cGMP-dependent, type I##AK313416|PRKG1|5592|protein kinase, cGMP-dependent, type I##EF560730|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC127090|PRKG1|5592|protein kinase, cGMP-dependent, type I##Y07512|PRKG1|5592|protein kinase, cGMP-dependent, type I##BC062688|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129235|PRKG1|5592|protein kinase, cGMP-dependent, type I##GQ129236|PRKG1|5592|protein kinase, cGMP-dependent, type I##AY826184|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AF360991|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096179|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096180|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096181|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC096182|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##BC069338|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##NM_000242|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##X15422|MBL2|4153|mannose-binding lectin (protein C) 2, soluble##AL834134|PCDH15|65217|protocadherin-related 15##AY029205|PCDH15|65217|protocadherin-related 15##AY029237|PCDH15|65217|protocadherin-related 15##EU718480|PCDH15|65217|protocadherin-related 15##EU718481|PCDH15|65217|protocadherin-related 15##EU718482|PCDH15|65217|protocadherin-related 15##NM_001142763|PCDH15|65217|protocadherin-related 15##NM_001142764|PCDH15|65217|protocadherin-related 15##NM_001142765|PCDH15|65217|protocadherin-related 15##NM_001142766|PCDH15|65217|protocadherin-related 15##NM_001142767|PCDH15|65217|protocadherin-related 15##NM_001142768|PCDH15|65217|protocadherin-related 15##NM_001142769|PCDH15|65217|protocadherin-related 15##NM_001142770|PCDH15|65217|protocadherin-related 15##NM_001142771|PCDH15|65217|protocadherin-related 15##NM_001142772|PCDH15|65217|protocadherin-related 15##NM_001142773|PCDH15|65217|protocadherin-related 15##NM_033056|PCDH15|65217|protocadherin-related 15##NM_001190478|MTRNR2L5|100463289|MT-RNR2-like 5	0.960439	CTCF.p2:-74:0.960
chr12	131601034	131601126	reg1035423.p2	3.674	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-162627	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-244369	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-244455	+	TSC_hg19_v1_chr12_+_132195623 BC142980	594533	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	594576	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	711886	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.96319	CTCF.p2:-22:0.963
chr1	225742190	225742303	reg1010227.p2	3.674	+	NM_194442	-125690	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	-126445	-	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	-126517	-	AF519769 TSC_hg19_v1_chr1_-_225840803 AY345143 AK290179 BC095481 NM_001008493 NM_018212	98541	-	NM_001130440 NM_003133 TSC_hg19_v1_chr1_+_225965547 BC066957 BC008443 EF488978 AF070649 BC021995 BC106005 U20998 BC015094 AK289595 BC022415 BC045603	223286	+	TSC_hg19_v1_chr1_+_225965556 BC064351 AL050363 BC067845	223324	+	NM_194442|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##AF519769|ENAH|55740|enabled homolog (Drosophila)##AY345143|ENAH|55740|enabled homolog (Drosophila)##AK290179|ENAH|55740|enabled homolog (Drosophila)##BC095481|ENAH|55740|enabled homolog (Drosophila)##NM_001008493|ENAH|55740|enabled homolog (Drosophila)##NM_018212|ENAH|55740|enabled homolog (Drosophila)##NM_001130440|SRP9|6726|signal recognition particle 9kDa##NM_003133|SRP9|6726|signal recognition particle 9kDa##BC066957|SRP9|6726|signal recognition particle 9kDa##BC008443|SRP9|6726|signal recognition particle 9kDa##EF488978|SRP9|6726|signal recognition particle 9kDa##AF070649|SRP9|6726|signal recognition particle 9kDa##BC021995|SRP9|6726|signal recognition particle 9kDa##BC106005|SRP9|6726|signal recognition particle 9kDa##U20998|SRP9|6726|signal recognition particle 9kDa##BC015094|SRP9|6726|signal recognition particle 9kDa##AK289595|SRP9|6726|signal recognition particle 9kDa##BC022415|SRP9|6726|signal recognition particle 9kDa##BC064351|SRP9|6726|signal recognition particle 9kDa##AL050363|SRP9|6726|signal recognition particle 9kDa##BC067845|SRP9|6726|signal recognition particle 9kDa	0.0	
chr15	64302835	64303013	reg1015417.p2	3.674	+	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-176784	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-176804	-	TSC_hg19_v1_chr15_-_64126081 U50078	-176840	-	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	35686	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	83173	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	85216	+	AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1	0.0	
chr2	99104509	99104625	reg1033617.p2	3.674	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-43209	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-141662	+	DQ426863 NM_001079878 NM_001298 DQ067460	-141934	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	120375	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	120483	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	120503	+	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)	0.0	
chr3	58285690	58285870	reg1004178.p1	3.674	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	-62250	+	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	-62497	+	NM_004944	-85383	-	TSC_hg19_v1_chr3_+_58291985 NM_001098783 NM_007042	6190	+	TSC_hg19_v1_chr3_+_58292000 AF001175	6220	+	TSC_hg19_v1_chr3_+_58292022 BC012017 BC002441 BC007342	6237	+	AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_001098783|RPP14|11102|ribonuclease P/MRP 14kDa subunit##NM_007042|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AF001175|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC012017|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC002441|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC007342|RPP14|11102|ribonuclease P/MRP 14kDa subunit	0.0	
chr4	120133927	120134099	reg1030968.p1	3.674	+	TSC_hg19_v1_chr4_+_120133867 BC062741 NM_019050 CR749490	-173	+	TSC_hg19_v1_chr4_+_120133742 BX648836	-270	+	NM_016599 AJ252149 AK313856 AY013295 BC017402 BC020932 BC005195	-77011	+	TSC_hg19_v1_chr4_-_120221773 AK025703 AF075061 BC017399 NM_001001701	87821	-	AY605045 NM_001170330	91586	-	CU686944 AK025079 BC069617 BC069466 BC069625 BC069637 BC111791 NM_000134	109273	-	BC062741|USP53|54532|ubiquitin specific peptidase 53##NM_019050|USP53|54532|ubiquitin specific peptidase 53##CR749490|USP53|54532|ubiquitin specific peptidase 53##NM_016599|MYOZ2|51778|myozenin 2##AJ252149|MYOZ2|51778|myozenin 2##AK313856|MYOZ2|51778|myozenin 2##AY013295|MYOZ2|51778|myozenin 2##BC017402|MYOZ2|51778|myozenin 2##BC020932|MYOZ2|51778|myozenin 2##BC005195|MYOZ2|51778|myozenin 2##AK025703|C4orf3|401152|chromosome 4 open reading frame 3##AF075061|C4orf3|401152|chromosome 4 open reading frame 3##BC017399|C4orf3|401152|chromosome 4 open reading frame 3##NM_001001701|C4orf3|401152|chromosome 4 open reading frame 3##AY605045|C4orf3|401152|chromosome 4 open reading frame 3##NM_001170330|C4orf3|401152|chromosome 4 open reading frame 3##AK025079|FABP2|2169|fatty acid binding protein 2, intestinal##BC069617|FABP2|2169|fatty acid binding protein 2, intestinal##BC069466|FABP2|2169|fatty acid binding protein 2, intestinal##BC069625|FABP2|2169|fatty acid binding protein 2, intestinal##BC069637|FABP2|2169|fatty acid binding protein 2, intestinal##BC111791|FABP2|2169|fatty acid binding protein 2, intestinal##NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal	0.0	
chr4	1858471	1858613	reg1030030.p2	3.674	+	DQ893606 AK293572 TSC_hg19_v1_chr4_-_1857827 BC014500 BC021208 AF061025 NM_012318	-711	-	TSC_hg19_v1_chr4_+_1795019 AB209441 NM_000142 NM_001163213 NM_022965	-63516	+	TSC_hg19_v1_chr4_+_1723248 AK302463 AK225631 BC106071 AF093543 AF479620 AJ243997 BC111771	-135274	+	AK289697 TSC_hg19_v1_chr4_+_1873132 NM_001042424	14542	+	TSC_hg19_v1_chr4_+_1873169 BC052254 BC020545 BC032731	14656	+	AF083386 AF083387 AF083388 AF083389 AF083390 AF083391 NM_007331 NM_133330 NM_133331 NM_133335	35966	+	DQ893606|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK293572|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC014500|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC021208|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AF061025|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##NM_012318|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AB209441|FGFR3|2261|fibroblast growth factor receptor 3##NM_000142|FGFR3|2261|fibroblast growth factor receptor 3##NM_001163213|FGFR3|2261|fibroblast growth factor receptor 3##NM_022965|FGFR3|2261|fibroblast growth factor receptor 3##AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AK289697|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_001042424|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC052254|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC020545|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##BC032731|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083386|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083387|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083388|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083389|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083390|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##AF083391|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_007331|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133330|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133331|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_133335|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	0.809813	CTCF.p2:18:0.810
chr4	55189252	55189386	reg1011322.p2	3.674	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-93855	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-94039	+	AB028838 EU596451 NM_133267	-223097	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	334815	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	802435	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	1023097	+	AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB028838|GSX2|170825|GS homeobox 2##EU596451|GSX2|170825|GS homeobox 2##NM_133267|GSX2|170825|GS homeobox 2##NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3	0.0	
chr6	166722049	166722190	reg1037631.p1	3.674	+	BC034775 NM_175922 TSC_hg19_v1_chr6_-_166721880	-243	-	BC098425 NM_003181	-139990	-	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	-320585	-	BC018969 NM_145169 TSC_hg19_v1_chr6_-_166756020	33888	-	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	33915	-	CU674406 TSC_hg19_v1_chr6_-_166796429 BC000810 AK312201 AK310934	74290	-	BC034775|PRR18|285800|proline rich 18##NM_175922|PRR18|285800|proline rich 18##BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)##BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##BC018969|SFT2D1|113402|SFT2 domain containing 1##NM_145169|SFT2D1|113402|SFT2 domain containing 1##AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1##BC000810|BRP44L|51660|brain protein 44-like##AK312201|BRP44L|51660|brain protein 44-like	0.629728	CTCF.p2:-33:0.414	CTCF.p2:-71:0.216
chr6	54109354	54109452	reg1034975.p1	3.674	+	NM_138569 BX647567 AK055530	-225653	+	TSC_hg19_v1_chr6_+_53659802 AF332199 AK292248 AB527517 AF359380 CU678434 EU176638 AK001637	-449472	+	TSC_hg19_v1_chr6_+_53659776 BC003193 NM_018214	-449644	+	BC070278 NM_014464 AK312918 BC056235 AB022277 AF195116 AF195117 CU687080 CU691132 EU832329 EU832414	63872	+	AK055204 NM_001010872 BC101628 BC112275	602185	+	NM_001526 AK314279	929691	+	NM_138569|MLIP|90523|muscular LMNA-interacting protein##BX647567|MLIP|90523|muscular LMNA-interacting protein##AK055530|MLIP|90523|muscular LMNA-interacting protein##AF332199|LRRC1|55227|leucine rich repeat containing 1##AK292248|LRRC1|55227|leucine rich repeat containing 1##AF359380|LRRC1|55227|leucine rich repeat containing 1##EU176638|LRRC1|55227|leucine rich repeat containing 1##AK001637|LRRC1|55227|leucine rich repeat containing 1##BC003193|LRRC1|55227|leucine rich repeat containing 1##NM_018214|LRRC1|55227|leucine rich repeat containing 1##BC070278|TINAG|27283|tubulointerstitial nephritis antigen##NM_014464|TINAG|27283|tubulointerstitial nephritis antigen##AK312918|TINAG|27283|tubulointerstitial nephritis antigen##BC056235|TINAG|27283|tubulointerstitial nephritis antigen##AB022277|TINAG|27283|tubulointerstitial nephritis antigen##AF195116|TINAG|27283|tubulointerstitial nephritis antigen##AF195117|TINAG|27283|tubulointerstitial nephritis antigen##EU832329|TINAG|27283|tubulointerstitial nephritis antigen##EU832414|TINAG|27283|tubulointerstitial nephritis antigen##AK055204|FAM83B|222584|family with sequence similarity 83, member B##NM_001010872|FAM83B|222584|family with sequence similarity 83, member B##BC101628|FAM83B|222584|family with sequence similarity 83, member B##BC112275|FAM83B|222584|family with sequence similarity 83, member B##NM_001526|HCRTR2|3062|hypocretin (orexin) receptor 2##AK314279|HCRTR2|3062|hypocretin (orexin) receptor 2	0.988328	CTCF.p2:0:0.988
chr7	151004885	151004996	reg1032420.p1	3.674	+	BX648385 TSC_hg19_v1_chr7_-_150974229 NM_003078 U66619	-30711	-	AY450431 BC002628 NM_001003802	-31121	-	TSC_hg19_v1_chr7_-_150946031 AY450430	-58899	-	TSC_hg19_v1_chr7_+_151038874 NM_001243351 NM_016118 AF300717	33902	+	TSC_hg19_v1_chr7_+_151038909 AF459743 AY129295 AK293159 AF155099	33974	+	AK056624 TSC_hg19_v1_chr7_-_151071775	66796	-	BX648385|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_003078|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##U66619|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##AY450431|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##BC002628|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_001003802|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##AY450430|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_001243351|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_016118|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF300717|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF459743|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AY129295|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AK293159|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF155099|NUB1|51667|negative regulator of ubiquitin-like proteins 1	0.0	
chr7	73441115	73441222	reg1007287.p1	3.674	+	AY372053 BC030643 NM_182504 GQ129394 GQ129395 AY372054	-165644	+	TSC_hg19_v1_chr7_-_73256847 AK301597 AF534110 NM_152559 AY354928	-184306	-	NM_001305 TSC_hg19_v1_chr7_+_73245327 AK026651 AK124076 BC000671 AB000712	-195897	+	NM_000501 NM_001081752 NM_001081753 NM_001081754 NM_001081755 AK075554 TSC_hg19_v1_chr7_+_73442441 AK075494	1265	+	TSC_hg19_v1_chr7_+_73442462 AK125511 AK130894	1288	+	TSC_hg19_v1_chr7_+_73442469 M36860 X52896	1301	+	AY372053|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##BC030643|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##NM_182504|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129394|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##GQ129395|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##AY372054|WBSCR28|135886|Williams-Beuren syndrome chromosome region 28##AK301597|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AF534110|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_152559|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##AY354928|WBSCR27|155368|Williams Beuren syndrome chromosome region 27##NM_001305|CLDN4|1364|claudin 4##AK026651|CLDN4|1364|claudin 4##AK124076|CLDN4|1364|claudin 4##BC000671|CLDN4|1364|claudin 4##AB000712|CLDN4|1364|claudin 4##NM_000501|ELN|2006|elastin##NM_001081752|ELN|2006|elastin##NM_001081753|ELN|2006|elastin##NM_001081754|ELN|2006|elastin##NM_001081755|ELN|2006|elastin##AK075554|ELN|2006|elastin##AK075494|ELN|2006|elastin##AK125511|ELN|2006|elastin##AK130894|ELN|2006|elastin##M36860|ELN|2006|elastin##X52896|ELN|2006|elastin	0.0	
chr8	8228213	8228290	reg1038321.p2	3.674	+	TSC_hg19_v1_chr8_-_8175862 AF075060	-52363	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-142109	+	AK292586 NM_001193630	-444393	+	AK122582 NM_001080826	10971	-	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	331447	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	522687	-	AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK292586|LOC100132396|100132396|zinc finger protein 705D-like##NM_001193630|LOC100132396|100132396|zinc finger protein 705D-like##AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1	0.0	
chrX	130845302	130845482	reg1004961.p2	3.674	+	BC137050 AB529233 NM_001004486	-167394	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-421980	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-422130	-	TSC_hg19_v1_chrX_-_130964633 AK097911	119259	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	311929	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	312248	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.0	
chr1	195074537	195074671	reg1039860.p1	3.673	+	AF288390 BC022507 NM_003783	-1918872	-	TSC_hg19_v1_chr1_+_193091308 BC007325 AF312865 AK314772 AB590625 CU688012 EU831787 EU831865 BC011808	-1983248	+	TSC_hg19_v1_chr1_+_193091242 AK300929 BC065037	-1983365	+	EU251076 BC103947 BC103948 BC103949 BC103950 AY359444 NM_198503 BX647852 AK309729 TSC_hg19_v1_chr1_-_196577612	1502921	-	TSC_hg19_v1_chr1_-_196577676 AK131498	1503078	-	NM_000186 NM_001014975 TSC_hg19_v1_chr1_+_196621172 AK291395 AK225649 X07523 Y00716 BC037285 BC012610 BC110643 BC073982 BC142699 CU691466	1546523	+	AF288390|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC022507|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##NM_003783|B3GALT2|8707|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2##BC007325|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AF312865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK314772|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831787|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU831865|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK300929|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##BC065037|CDC73|79577|cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##EU251076|KCNT2|343450|potassium channel, subfamily T, member 2##BC103947|KCNT2|343450|potassium channel, subfamily T, member 2##BC103948|KCNT2|343450|potassium channel, subfamily T, member 2##BC103949|KCNT2|343450|potassium channel, subfamily T, member 2##BC103950|KCNT2|343450|potassium channel, subfamily T, member 2##AY359444|KCNT2|343450|potassium channel, subfamily T, member 2##NM_198503|KCNT2|343450|potassium channel, subfamily T, member 2##BX647852|KCNT2|343450|potassium channel, subfamily T, member 2##AK309729|KCNT2|343450|potassium channel, subfamily T, member 2##AK131498|KCNT2|343450|potassium channel, subfamily T, member 2##NM_000186|CFH|3075|complement factor H##NM_001014975|CFH|3075|complement factor H##AK291395|CFH|3075|complement factor H##AK225649|CFH|3075|complement factor H##X07523|CFH|3075|complement factor H##Y00716|CFH|3075|complement factor H##BC037285|CFH|3075|complement factor H##BC012610|CFH|3075|complement factor H##BC110643|CFH|3075|complement factor H##BC073982|CFH|3075|complement factor H##BC142699|CFH|3075|complement factor H	0.595892	CTCF.p2:19:0.596
chr13	33721185	33721297	reg1028265.p2	3.673	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-130718	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-560558	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-560602	+	AY082590 BC046563 NM_001243466 NM_178007	38974	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	58923	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	138626	-	AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr16	11300696	11300876	reg1042331.p2	3.673	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-262343	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-264551	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-264620	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	49264	-	X63758 BC096135 BC096136 BC096137 NM_005425	62352	-	NM_021247	66665	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr16	21313110	21313187	reg1037483.p2	3.673	+	BC018061 AK290852 TSC_hg19_v1_chr16_-_21289660	-23500	-	CU676152 DQ892377 DQ895591 AK310424 U85772 L02950 TSC_hg19_v1_chr16_-_21289612 BC008398	-23555	-	AK096138 NM_145865 TSC_hg19_v1_chr16_+_21245019 BC111784 BC112368	-68128	+	BX648477 NM_001014444 NM_001888	1239	-	BC036263 NM_130464	123509	-	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	218604	-	BC018061|CRYM|1428|crystallin, mu##AK290852|CRYM|1428|crystallin, mu##DQ892377|CRYM|1428|crystallin, mu##DQ895591|CRYM|1428|crystallin, mu##AK310424|CRYM|1428|crystallin, mu##U85772|CRYM|1428|crystallin, mu##L02950|CRYM|1428|crystallin, mu##BC008398|CRYM|1428|crystallin, mu##AK096138|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##NM_145865|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##BC111784|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##BC112368|ANKS4B|257629|ankyrin repeat and sterile alpha motif domain containing 4B##BX648477|CRYM|1428|crystallin, mu##NM_001014444|CRYM|1428|crystallin, mu##NM_001888|CRYM|1428|crystallin, mu##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2	0.0	
chr16	74260623	74260775	reg1038449.p2	3.673	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-1168113	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-1178478	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-1268994	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	69994	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	70072	+	TSC_hg19_v1_chr16_-_74401811 AK124154	141113	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.993436	CTCF.p2:13:0.993
chr17	3947218	3947399	reg1035511.p1	3.673	+	AB462957 DQ893317 EU176809 Z69881 TSC_hg19_v1_chr17_-_3867744 AF068220 BC035729 AK292716 NM_005173 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958	-79607	-	NM_002558	-127349	-	X83688 U45448 BC044657 BC027949 TSC_hg19_v1_chr17_-_3819762 AK310981 AK313264 AF020498	-127560	-	AB384472 TSC_hg19_v1_chr17_-_4046240	98907	-	TSC_hg19_v1_chr17_-_4046246 AB007859 BC151836 NM_015113	98944	-	TSC_hg19_v1_chr17_-_4046308 AK127482	99002	-	DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_002558|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##X83688|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##U45448|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC044657|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC027949|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AK313264|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AF020498|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	0.0	
chr17	56698721	56698849	reg1039369.p1	3.673	+	AK097440 BC022189 NM_001038704	-77078	-	AK301914 AK302146 NM_001198713	-80607	-	BC018056 U88870 AK295527 AK315396 TSC_hg19_v1_chr17_-_56609427 AF176379 AK308957 NM_080415 NM_080416	-89367	-	AK308299 BC040526 AK125896 BC045647 AL834143 NM_001201457 NM_031272 NM_198393	70610	-	TSC_hg19_v1_chr17_+_56769933 BC107753	71150	+	TSC_hg19_v1_chr17_+_56769962 AF029669 AK290487 BC073161 NM_002876 NM_058216 BC064578 BC093930 BC101485 BC143259 BC000667 AF029670 AB528656 BT007339 AK129738 AK303363	71216	+	AK097440|C17orf47|284083|chromosome 17 open reading frame 47##BC022189|C17orf47|284083|chromosome 17 open reading frame 47##NM_001038704|C17orf47|284083|chromosome 17 open reading frame 47##AK301914|SEPT4|5414|septin 4##AK302146|SEPT4|5414|septin 4##NM_001198713|SEPT4|5414|septin 4##BC018056|SEPT4|5414|septin 4##U88870|SEPT4|5414|septin 4##AK295527|SEPT4|5414|septin 4##AK315396|SEPT4|5414|septin 4##AF176379|SEPT4|5414|septin 4##AK308957|SEPT4|5414|septin 4##NM_080415|SEPT4|5414|septin 4##NM_080416|SEPT4|5414|septin 4##AK308299|TEX14|56155|testis expressed 14##BC040526|TEX14|56155|testis expressed 14##AK125896|TEX14|56155|testis expressed 14##BC045647|TEX14|56155|testis expressed 14##AL834143|TEX14|56155|testis expressed 14##NM_001201457|TEX14|56155|testis expressed 14##NM_031272|TEX14|56155|testis expressed 14##NM_198393|TEX14|56155|testis expressed 14##BC107753|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029669|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK290487|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC073161|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_002876|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##NM_058216|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC093930|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC101485|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC143259|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BC000667|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AF029670|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##BT007339|RAD51C|5889|RAD51 homolog C (S. cerevisiae)##AK303363|RAD51C|5889|RAD51 homolog C (S. cerevisiae)	0.0	
chr22	21336170	21336275	reg1034080.p1	3.673	+	AY927574 TSC_hg19_v1_chr22_+_21330441	-5818	+	NM_001146288 AK094844 TSC_hg19_v1_chr22_+_21321550 AK295581 AK316042	-14723	+	NM_001018060 NM_144704 AK055035 TSC_hg19_v1_chr22_+_21319447 BC032485	-16787	+	TSC_hg19_v1_chr22_+_21336557 NM_006767	316	+	TSC_hg19_v1_chr22_+_21336585 AK310747	371	+	TSC_hg19_v1_chr22_+_21336617 AK296347 CT841521 BC026214 AB385248 CU013113 CU013401 D38496	468	+	AY927574|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##NM_001146288|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##AK094844|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##AK295581|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##AK316042|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##NM_001018060|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##NM_144704|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##AK055035|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##BC032485|AIFM3|150209|apoptosis-inducing factor, mitochondrion-associated, 3##NM_006767|LZTR1|8216|leucine-zipper-like transcription regulator 1##AK310747|LZTR1|8216|leucine-zipper-like transcription regulator 1##AK296347|LZTR1|8216|leucine-zipper-like transcription regulator 1##CT841521|LZTR1|8216|leucine-zipper-like transcription regulator 1##BC026214|LZTR1|8216|leucine-zipper-like transcription regulator 1##CU013113|LZTR1|8216|leucine-zipper-like transcription regulator 1##CU013401|LZTR1|8216|leucine-zipper-like transcription regulator 1##D38496|LZTR1|8216|leucine-zipper-like transcription regulator 1	0.529685	CTCF.p2:-24:0.530
chr2	238927337	238927455	reg1033962.p1	3.673	+	TSC_hg19_v1_chr2_+_238875689 BC010549 AK294107	-51693	+	TSC_hg19_v1_chr2_+_238875673 AK290063	-51716	+	NM_080678 TSC_hg19_v1_chr2_+_238875655 AK002119 AK293334 AK297502 AK303094	-51772	+	AB209458 NM_016510 TSC_hg19_v1_chr2_+_238969639	42205	+	TSC_hg19_v1_chr2_+_238969669 AK301009 BC007891 AF175767 AK298409 DQ893234 DQ896564 CU675851	42284	+	TSC_hg19_v1_chr2_+_238969747 BC000586 AK293283	42371	+	BC010549|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK294107|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK290063|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##NM_080678|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK293334|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK297502|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AK303094|UBE2F|140739|ubiquitin-conjugating enzyme E2F (putative)##AB209458|SCLY|51540|selenocysteine lyase##NM_016510|SCLY|51540|selenocysteine lyase##AK301009|SCLY|51540|selenocysteine lyase##BC007891|SCLY|51540|selenocysteine lyase##AF175767|SCLY|51540|selenocysteine lyase##AK298409|SCLY|51540|selenocysteine lyase##DQ893234|SCLY|51540|selenocysteine lyase##DQ896564|SCLY|51540|selenocysteine lyase##BC000586|SCLY|51540|selenocysteine lyase##AK293283|SCLY|51540|selenocysteine lyase	0.0	
chr3	193323833	193323939	reg1034638.p2	3.673	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-12721	+	TSC_hg19_v1_chr3_+_193311006 BC043443 BC075805 AB011139	-12819	+	TSC_hg19_v1_chr3_+_193310928 NM_015560 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837	-12931	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	530047	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	530069	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	748188	-	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)##BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)##AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2	0.9874	CTCF.p2:-9:0.987
chr6	131437839	131437951	reg1001088.p1	3.673	+	TSC_hg19_v1_chr6_-_131384387 AK295124 NM_001135554 NM_001135555 NM_001199388 NM_001431	-53471	-	AF027299 TSC_hg19_v1_chr6_-_131384381 BC034718 AB209522	-53544	-	CR749262 CR936793 NM_001252660	-116008	-	NM_016377 TSC_hg19_v1_chr6_+_131456855 AK300587	18952	+	NM_004842 NM_138633	133403	+	NM_000045 NM_001244438 AY074488 BC005321 TSC_hg19_v1_chr6_+_131894365 M14502 BC020653 CU676606 AB590280 DQ892039 DQ895230 BT006741	456487	+	AK295124|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001135554|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001135555|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199388|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001431|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AF027299|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##BC034718|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##AB209522|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_016377|AKAP7|9465|A kinase (PRKA) anchor protein 7##AK300587|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_004842|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_138633|AKAP7|9465|A kinase (PRKA) anchor protein 7##NM_000045|ARG1|383|arginase, liver##NM_001244438|ARG1|383|arginase, liver##AY074488|ARG1|383|arginase, liver##BC005321|ARG1|383|arginase, liver##M14502|ARG1|383|arginase, liver##BC020653|ARG1|383|arginase, liver##DQ892039|ARG1|383|arginase, liver##DQ895230|ARG1|383|arginase, liver##BT006741|ARG1|383|arginase, liver	0.0	
chr8	64023761	64023892	reg1030997.p2	3.673	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-25199	-	NM_003878	-72217	-	AK290450 TSC_hg19_v1_chr8_-_63951364 AK301094 U55206 BC025025	-72428	-	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	57318	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	57374	+	NM_152414 AK293979	1469032	+	U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_003878|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK290450|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##AK301094|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##U55206|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##BC025025|GGH|8836|gamma-glutamyl hydrolase (conjugase, folylpolygammaglutamyl hydrolase)##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22	0.991616	CTCF.p2:-19:0.992
chrY	1553111	1553223	reg1034534.p1	3.673	+	AK301844 NM_001173473	-30516	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-31366	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-92198	-	BC043610 GQ280263 NM_178129 AK126147	52871	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	107362	+	NM_004043 U11090	111180	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr10	130122469	130122559	reg1040532.p1	3.672	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-197986	-	BX648180 NM_130435 BC071573 TSC_hg19_v1_chr10_+_129845875 AK290414 AJ430580 AJ315969	-276660	+	TSC_hg19_v1_chr10_+_129705366 AF406557 BC050062 X54134	-417059	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	1142957	+	TSC_hg19_v1_chr10_+_131265507 BC000824	1143000	+	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	1639539	-	NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##BX648180|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_130435|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC071573|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AK290414|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ430580|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AJ315969|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##AF406557|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##BC050062|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##X54134|PTPRE|5791|protein tyrosine phosphatase, receptor type, E##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3	0.071803	
chr10	15940216	15940396	reg1034126.p1	3.672	+	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	-37815	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	-178513	-	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	-527157	-	AK314910 BC015092 NM_001001484 NM_030664 BC050411 BX648556 AK095486 TSC_hg19_v1_chr10_+_16479008 AF212237	538679	+	NM_001010908	623697	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	919053	-	BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##AK314910|PTER|9317|phosphotriesterase related##BC015092|PTER|9317|phosphotriesterase related##NM_001001484|PTER|9317|phosphotriesterase related##NM_030664|PTER|9317|phosphotriesterase related##BC050411|PTER|9317|phosphotriesterase related##BX648556|PTER|9317|phosphotriesterase related##AK095486|PTER|9317|phosphotriesterase related##AF212237|PTER|9317|phosphotriesterase related##NM_001010908|C1QL3|389941|complement component 1, q subcomponent-like 3##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1	0.0	
chr1	156252735	156252867	reg1038043.p2	3.672	+	AK122634 TSC_hg19_v1_chr1_+_156252725 BC005094	-70	+	TSC_hg19_v1_chr1_-_156252617 NM_015327	-181	-	TSC_hg19_v1_chr1_-_156252614 BC038296	-187	-	NM_032323 AK315767 AK056816	1285	+	BC036340 AY358450 AK296157 AK075349 BC018757 NM_144580 TSC_hg19_v1_chr1_-_156265450	12623	-	TSC_hg19_v1_chr1_-_156265459 BC011575	12658	-	AK122634|TMEM79|84283|transmembrane protein 79##BC005094|TMEM79|84283|transmembrane protein 79##NM_015327|SMG5|23381|smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC038296|SMG5|23381|smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_032323|TMEM79|84283|transmembrane protein 79##AK315767|TMEM79|84283|transmembrane protein 79##AK056816|TMEM79|84283|transmembrane protein 79##BC036340|C1orf85|112770|chromosome 1 open reading frame 85##AY358450|C1orf85|112770|chromosome 1 open reading frame 85##AK296157|C1orf85|112770|chromosome 1 open reading frame 85##AK075349|C1orf85|112770|chromosome 1 open reading frame 85##BC018757|C1orf85|112770|chromosome 1 open reading frame 85##NM_144580|C1orf85|112770|chromosome 1 open reading frame 85##BC011575|C1orf85|112770|chromosome 1 open reading frame 85	0.0	
chr11	63683973	63684047	reg1034815.p1	3.672	+	NM_017490 AK290339 TSC_hg19_v1_chr11_+_63656059 X97630 AY562188	-27934	+	TSC_hg19_v1_chr11_+_63606599 AK307858	-77406	+	TSC_hg19_v1_chr11_+_63606564 AK225766	-77461	+	BC023587 NM_173587	305	-	TSC_hg19_v1_chr11_-_63684632 AB593132	629	-	TSC_hg19_v1_chr11_+_63706473 NM_024771 AK023910 AK300451 AK303557 JF263566 BC041617 BC052298	22474	+	NM_017490|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK290339|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##X97630|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AY562188|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK307858|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK225766|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##BC023587|RCOR2|283248|REST corepressor 2##NM_173587|RCOR2|283248|REST corepressor 2##AB593132|RCOR2|283248|REST corepressor 2##NM_024771|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK023910|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK300451|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##AK303557|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##JF263566|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC041617|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)##BC052298|NAA40|79829|N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	0.333459	CTCF.p2:13:0.333
chr14	72200695	72200831	reg1036697.p1	3.672	+	AF090989 AF090990 NM_015556	-204722	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-826312	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-826630	+	AK294895 NM_001204423	198053	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	198390	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	199103	+	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6	0.123666	
chr15	31647266	31647383	reg1037602.p1	3.672	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-27986	+	NM_001243538	-124275	-	GQ502181 HM135791 NM_001252020	-193896	-	AJ430383 NM_130901	300217	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	515505	-	TSC_hg19_v1_chr15_-_32162898 AK126002	515619	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr17	70973549	70973626	reg1040104.p2	3.672	+	AK000477 TSC_hg19_v1_chr17_-_70588944	-384644	-	TSC_hg19_v1_chr17_+_70117187 BC007951	-856347	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-856417	+	AF331643 TSC_hg19_v1_chr17_-_71088816	115229	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	115236	-	BC035631 TSC_hg19_v1_chr17_-_71088831	115244	-	AK000477|LOC100499467|100499467|uncharacterized LOC100499467##BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr18	42260866	42261043	reg1035777.p1	3.672	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	-86	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	-840	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1403525	-	NM_001242692 AK292422	531998	+	AF349446 NM_007163	933811	+	NM_001128588 NM_001146036 NM_015865 TSC_hg19_v1_chr18_+_43304115	1043150	+	AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AF349446|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_007163|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##NM_001128588|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_001146036|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)##NM_015865|SLC14A1|6563|solute carrier family 14 (urea transporter), member 1 (Kidd blood group)	0.0	
chr20	61609027	61609122	reg1026477.p1	3.672	+	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-24949	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-25044	+	TSC_hg19_v1_chr20_+_61569501 NM_017896 BC032120 AK299509 AK000609	-39618	+	BC137288 BC137308 NM_080606	29312	-	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	238449	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	258267	+	AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##NM_017896|C20orf11|54994|chromosome 20 open reading frame 11##BC032120|C20orf11|54994|chromosome 20 open reading frame 11##AK299509|C20orf11|54994|chromosome 20 open reading frame 11##AK000609|C20orf11|54994|chromosome 20 open reading frame 11##BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7	0.0	
chr2	30462291	30462385	reg1034557.p2	3.672	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-7836	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-92462	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	-92505	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	207810	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	567955	-	AK122747 NM_001253827	890159	-	AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.0	
chr2	62590500	62590615	reg1032168.p2	3.672	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-167291	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-457728	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-474771	-	BC047439 AK091902 AX747245 NM_198276	142982	-	AK292545 NM_001142615	310428	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	342409	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr2	74154053	74154153	reg1035180.p2	3.672	+	TSC_hg19_v1_chr2_+_74154019 X97386	-57	+	TSC_hg19_v1_chr2_+_74154006 BC024019 U41668 BC001121 BC015757	-103	+	TSC_hg19_v1_chr2_+_74153968 NM_080916 NM_080918	-153	+	NM_144993	119346	+	BC028282 DQ225187 TSC_hg19_v1_chr2_-_74375022 BC046531 BC042036 NM_001035505 NM_212552	220915	-	BC030102 AK123453 BC008757 TSC_hg19_v1_chr2_+_74375241 BC007916 BC015635	221117	+	X97386|DGUOK|1716|deoxyguanosine kinase##BC024019|DGUOK|1716|deoxyguanosine kinase##U41668|DGUOK|1716|deoxyguanosine kinase##BC001121|DGUOK|1716|deoxyguanosine kinase##BC015757|DGUOK|1716|deoxyguanosine kinase##NM_080916|DGUOK|1716|deoxyguanosine kinase##NM_080918|DGUOK|1716|deoxyguanosine kinase##NM_144993|TET3|200424|tet methylcytosine dioxygenase 3##BC028282|BOLA3|388962|bolA homolog 3 (E. coli)##DQ225187|BOLA3|388962|bolA homolog 3 (E. coli)##BC046531|BOLA3|388962|bolA homolog 3 (E. coli)##BC042036|BOLA3|388962|bolA homolog 3 (E. coli)##NM_001035505|BOLA3|388962|bolA homolog 3 (E. coli)##NM_212552|BOLA3|388962|bolA homolog 3 (E. coli)##BC030102|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##AK123453|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC008757|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC007916|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)##BC015635|BOLA3-AS1|100507171|BOLA3 antisense RNA 1 (non-protein coding)	0.019017	
chr3	15149856	15150036	reg1008434.p2	3.672	+	TSC_hg19_v1_chr3_-_15140655 AK291288 AK301735 AL833545 NM_022340	-9293	-	TSC_hg19_v1_chr3_-_15140649 BC032628	-9297	-	AB209673 TSC_hg19_v1_chr3_-_15140645	-9312	-	TSC_hg19_v1_chr3_+_15247736 NM_014296	97788	+	TSC_hg19_v1_chr3_+_15247768 AB028639 BC056202 AK314253 CU691130	98008	+	BC023195 DQ892875 EU176725 AB005047 AB590534 TSC_hg19_v1_chr3_-_15374053 BC010123	223995	-	AK291288|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AK301735|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AL833545|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_022340|ZFYVE20|64145|zinc finger, FYVE domain containing 20##BC032628|ZFYVE20|64145|zinc finger, FYVE domain containing 20##AB209673|ZFYVE20|64145|zinc finger, FYVE domain containing 20##NM_014296|CAPN7|23473|calpain 7##AB028639|CAPN7|23473|calpain 7##BC056202|CAPN7|23473|calpain 7##AK314253|CAPN7|23473|calpain 7##BC023195|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##DQ892875|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##EU176725|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##AB005047|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)##BC010123|SH3BP5|9467|SH3-domain binding protein 5 (BTK-associated)	0.024654	
chr5	55777429	55777604	reg1026859.p1	3.672	+	AK123389 NM_024669	-248331	-	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-486753	-	NM_001242636 NM_001242639	-628367	+	NM_005921	333383	+	TSC_hg19_v1_chr5_+_56111375 AK307828	333848	+	TSC_hg19_v1_chr5_+_56111395 AF042838	333902	+	AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr7	55584950	55585115	reg1032095.p1	3.672	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	-151460	+	AK095857 NM_018697	-151892	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-498086	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	55008	-	TSC_hg19_v1_chr7_-_55640073 AB097004	55050	-	BC016650 AK314338 TSC_hg19_v1_chr7_-_55640107	55073	-	AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AB097004|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##BC016650|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK314338|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	0.0	
chrY	27568647	27568714	reg1034481.p1	3.672	+	AF000980 NM_001002760 NM_001002761 NM_004678	-370430	-	NM_001005375 NM_020364 NM_020420 NM_001005785 NM_001005786 AF414184 BC047480 BC036648 BC047617 U21663 AF248480 AF248482 AF248481 BC113005 BC113006	-588607	+	BC113005 BC047617 BC047480 NM_020364 NM_020420	-609150	-	AK292375 BC033041 NM_001003894 NM_001003895 NM_004680 NM_170723 AK292318 AF000981 AF080597	199594	+	AK289543 AK311508 NM_005840 AK125483	31531760	+	NM_001145149 NM_001185183 NM_005638 BC056141 AK312658 AK295605 X92396 AK293525 AK297385 AJ549301 AJ295938 AK222794 BC020969	31645317	+	AF000980|BPY2|9083|basic charge, Y-linked, 2##NM_001002760|BPY2B|442867|basic charge, Y-linked, 2B##NM_001002761|BPY2C|442868|basic charge, Y-linked, 2C##NM_004678|BPY2|9083|basic charge, Y-linked, 2##NM_001005375|DAZ4|57135|deleted in azoospermia 4##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##NM_001005785|DAZ2|57055|deleted in azoospermia 2##NM_001005786|DAZ2|57055|deleted in azoospermia 2##AF414184|DAZ2|57055|deleted in azoospermia 2##BC047480|DAZ4|57135|deleted in azoospermia 4##BC036648|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##U21663|DAZ2|57055|deleted in azoospermia 2##AF248480|DAZ2|57055|deleted in azoospermia 2##AF248482|DAZ4|57135|deleted in azoospermia 4##AF248481|DAZ3|57054|deleted in azoospermia 3##BC113005|DAZ3|57054|deleted in azoospermia 3##BC113006|DAZ2|57055|deleted in azoospermia 2##BC113005|DAZ3|57054|deleted in azoospermia 3##BC047617|DAZ4|57135|deleted in azoospermia 4##BC047480|DAZ4|57135|deleted in azoospermia 4##NM_020364|DAZ3|57054|deleted in azoospermia 3##NM_020420|DAZ4|57135|deleted in azoospermia 4##AK292375|CDY1|9085|chromodomain protein, Y-linked, 1##BC033041|CDY1|9085|chromodomain protein, Y-linked, 1##NM_001003894|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_001003895|CDY1B|253175|chromodomain protein, Y-linked, 1B##NM_004680|CDY1|9085|chromodomain protein, Y-linked, 1##NM_170723|CDY1|9085|chromodomain protein, Y-linked, 1##AK292318|CDY1B|253175|chromodomain protein, Y-linked, 1B##AF000981|CDY1|9085|chromodomain protein, Y-linked, 1##AF080597|CDY1|9085|chromodomain protein, Y-linked, 1##AK289543|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_005840|SPRY3|10251|sprouty homolog 3 (Drosophila)##AK125483|SPRY3|10251|sprouty homolog 3 (Drosophila)##NM_001145149|VAMP7|6845|vesicle-associated membrane protein 7##NM_001185183|VAMP7|6845|vesicle-associated membrane protein 7##NM_005638|VAMP7|6845|vesicle-associated membrane protein 7##BC056141|VAMP7|6845|vesicle-associated membrane protein 7##AK312658|VAMP7|6845|vesicle-associated membrane protein 7##AK295605|VAMP7|6845|vesicle-associated membrane protein 7##X92396|VAMP7|6845|vesicle-associated membrane protein 7##AK293525|VAMP7|6845|vesicle-associated membrane protein 7##AK297385|VAMP7|6845|vesicle-associated membrane protein 7##AJ549301|VAMP7|6845|vesicle-associated membrane protein 7##AJ295938|VAMP7|6845|vesicle-associated membrane protein 7##AK222794|VAMP7|6845|vesicle-associated membrane protein 7	0.919612	CTCF.p2:-1:0.920
chr1	213147843	213147984	reg1039192.p1	3.671	+	AK302675 TSC_hg19_v1_chr1_+_213124038	-23890	+	TSC_hg19_v1_chr1_+_213123945 AK290973 NM_001136474 NM_001136475 NM_024749 AK022567 AK096605 BC053836 BC051856 BC028194	-23996	+	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	-116233	+	TSC_hg19_v1_chr1_-_213188830 AK299208	40898	-	TSC_hg19_v1_chr1_-_213189125 AK294479 AK311276 AK299365 BC047469 AK295116 AF510741 AL079275 NM_144567	41214	-	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	76674	+	AK302675|VASH2|79805|vasohibin 2##AK290973|VASH2|79805|vasohibin 2##NM_001136474|VASH2|79805|vasohibin 2##NM_001136475|VASH2|79805|vasohibin 2##NM_024749|VASH2|79805|vasohibin 2##AK022567|VASH2|79805|vasohibin 2##AK096605|VASH2|79805|vasohibin 2##BC053836|VASH2|79805|vasohibin 2##BC051856|VASH2|79805|vasohibin 2##BC028194|VASH2|79805|vasohibin 2##AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK299208|ANGEL2|90806|angel homolog 2 (Drosophila)##AK294479|ANGEL2|90806|angel homolog 2 (Drosophila)##AK311276|ANGEL2|90806|angel homolog 2 (Drosophila)##AK299365|ANGEL2|90806|angel homolog 2 (Drosophila)##BC047469|ANGEL2|90806|angel homolog 2 (Drosophila)##AK295116|ANGEL2|90806|angel homolog 2 (Drosophila)##AF510741|ANGEL2|90806|angel homolog 2 (Drosophila)##AL079275|ANGEL2|90806|angel homolog 2 (Drosophila)##NM_144567|ANGEL2|90806|angel homolog 2 (Drosophila)##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1	0.0	
chr15	70600731	70600836	reg1037493.p1	3.671	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-210540	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-210556	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-258874	-	TSC_hg19_v1_chr15_-_70878946 BC040579	278161	-	BC016881 AL834243 NM_001008224 AK055435	393844	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	455059	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.0	
chr1	68586476	68586543	reg1001117.p2	3.671	+	BC005362 U96750 NM_004675	-70124	-	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	-287399	-	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	-288521	+	TSC_hg19_v1_chr1_-_68698207 BC137109 BC137113 BC110826 AB097018 AK074984 AK301613 BX648748 BX538320 NM_001002292 NM_001193334 AK074583 AK309779 DQ323735 AY359035 NM_024911	111648	-	AK289925 BC075035 BC075036 NM_000329 U18991	329127	-	CU688044 BC065304 BC011743 BC035506 BC041580 TSC_hg19_v1_chr1_-_68962723	376192	-	BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK124028|LOC100289178|100289178|uncharacterized LOC100289178##BC137109|WLS|79971|wntless homolog (Drosophila)##BC137113|WLS|79971|wntless homolog (Drosophila)##BC110826|WLS|79971|wntless homolog (Drosophila)##AB097018|WLS|79971|wntless homolog (Drosophila)##AK074984|WLS|79971|wntless homolog (Drosophila)##AK301613|WLS|79971|wntless homolog (Drosophila)##BX648748|WLS|79971|wntless homolog (Drosophila)##BX538320|WLS|79971|wntless homolog (Drosophila)##NM_001002292|WLS|79971|wntless homolog (Drosophila)##NM_001193334|WLS|79971|wntless homolog (Drosophila)##AK074583|WLS|79971|wntless homolog (Drosophila)##AK309779|WLS|79971|wntless homolog (Drosophila)##DQ323735|WLS|79971|wntless homolog (Drosophila)##AY359035|WLS|79971|wntless homolog (Drosophila)##NM_024911|WLS|79971|wntless homolog (Drosophila)##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC065304|DEPDC1|55635|DEP domain containing 1##BC011743|DEPDC1|55635|DEP domain containing 1##BC035506|DEPDC1|55635|DEP domain containing 1##BC041580|DEPDC1|55635|DEP domain containing 1	0.0	
chr21	34752972	34753083	reg1035965.p1	3.671	+	AK222770 AK222812 AK312631 TSC_hg19_v1_chr21_+_34697277 BC021825 J03171 BC002590 AB528746 CU692410 DQ891323 DQ894507	-55709	+	TSC_hg19_v1_chr21_+_34697236 NM_000629	-55809	+	TSC_hg19_v1_chr21_+_34638753 AK299961 AB590138 DQ892552 DQ895763 BT009777	-114273	+	TSC_hg19_v1_chr21_+_34775192 NM_005534 U05875	22169	+	TSC_hg19_v1_chr21_+_34775735 BC003624 U05877	22705	+	AK314005 TSC_hg19_v1_chr21_+_34775746 AK292246	22721	+	AK222770|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK222812|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK312631|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC021825|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##J03171|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC002590|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ891323|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ894507|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##NM_000629|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK299961|IL10RB|3588|interleukin 10 receptor, beta##DQ892552|IL10RB|3588|interleukin 10 receptor, beta##DQ895763|IL10RB|3588|interleukin 10 receptor, beta##BT009777|IL10RB|3588|interleukin 10 receptor, beta##NM_005534|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05875|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##BC003624|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05877|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK314005|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK292246|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)	0.0	
chr2	64843372	64843466	reg1039424.p2	3.671	+	TSC_hg19_v1_chr2_+_64751580 AL833962	-91817	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	-91935	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	-161771	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	37430	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	37628	-	TSC_hg19_v1_chr2_-_65090764 AK097952	247322	-	AL833962|AFTPH|54812|aftiphilin##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2	0.0	
chr3	169846429	169846577	reg1037615.p2	3.671	+	TSC_hg19_v1_chr3_+_169755984 AK311293	-90551	+	TSC_hg19_v1_chr3_+_169755782 BC000181	-90713	+	TSC_hg19_v1_chr3_+_169755748 NM_014373	-90749	+	TSC_hg19_v1_chr3_-_169899511 BC112944 BC131773 BX647868 EF560717 AF380154 AJ320486 AK023029 BC131772	52942	-	TSC_hg19_v1_chr3_-_169899522 AK022791 BC022325 AK300151 AK302371 BC070164 AK304411 NM_024947	53025	-	TSC_hg19_v1_chr3_+_169940214 NM_002740 L18964	93714	+	AK311293|GPR160|26996|G protein-coupled receptor 160##BC000181|GPR160|26996|G protein-coupled receptor 160##NM_014373|GPR160|26996|G protein-coupled receptor 160##BC112944|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC131773|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BX647868|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##EF560717|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AF380154|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AJ320486|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AK023029|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC131772|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AK022791|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC022325|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AK300151|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##BC070164|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##AK304411|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##NM_024947|PHC3|80012|polyhomeotic homolog 3 (Drosophila)##NM_002740|PRKCI|5584|protein kinase C, iota##L18964|PRKCI|5584|protein kinase C, iota	0.0	
chr3	182432092	182432198	reg1015977.p2	3.671	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-1002007	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-1002432	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-1014753	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	79142	+	AK296750 TSC_hg19_v1_chr3_+_182511291	79150	+	TSC_hg19_v1_chr3_+_182511375 AF156548	79244	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.0	
chr3	66423218	66423334	reg1043211.p1	3.671	+	NM_001164796	-152109	+	AK092495 AX747571 NM_173471	-303992	+	BC062367 NM_001033057 NM_004742 NM_015520 TSC_hg19_v1_chr3_-_66024518	-398763	-	TSC_hg19_v1_chr3_+_66444897 AB075504	21683	+	AF381545 BC140907 NM_015541 AY730707	127576	-	TSC_hg19_v1_chr3_-_66551436 AB050468 AK314103 BC071561	128188	-	NM_001164796|SLC25A26|115286|solute carrier family 25, member 26##AK092495|SLC25A26|115286|solute carrier family 25, member 26##AX747571|SLC25A26|115286|solute carrier family 25, member 26##NM_173471|SLC25A26|115286|solute carrier family 25, member 26##BC062367|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_001033057|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_004742|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##NM_015520|MAGI1|9223|membrane associated guanylate kinase, WW and PDZ domain containing 1##AF381545|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC140907|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##NM_015541|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AY730707|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AB050468|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##AK314103|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1##BC071561|LRIG1|26018|leucine-rich repeats and immunoglobulin-like domains 1	1.442538	CTCF.p2:-4:0.716	CTCF.p2:96:0.727
chr4	75074036	75074175	reg1036740.p2	3.671	+	TSC_hg19_v1_chr4_+_75023834 AX794782 BC037529 NM_001144978 BC041943 AX794779	-50240	+	NM_002089 TSC_hg19_v1_chr4_-_74965027	-109083	-	CR542171 CU677427 AB590957 X53799 M57731 BC015753 BC053653 TSC_hg19_v1_chr4_-_74964913 AK308504 M36820 AK311304 BC005276	-109230	-	AK289455 BC127938 BC127939 DQ235269 AY358920 NM_001013442 DQ235264 DQ235265 DQ235266 DQ235267 DQ235268	100114	+	TSC_hg19_v1_chr4_+_75230861 AK314959 D30783 NM_001432 BC035806 BC136404 BC136405 CR541887	156835	+	BC009799 M30704 NM_001657	236747	+	BC037529|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_001144978|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##BC041943|MTHFD2L|441024|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like##NM_002089|CXCL2|2920|chemokine (C-X-C motif) ligand 2##CR542171|CXCL2|2920|chemokine (C-X-C motif) ligand 2##X53799|CXCL2|2920|chemokine (C-X-C motif) ligand 2##M57731|CXCL2|2920|chemokine (C-X-C motif) ligand 2##BC015753|CXCL2|2920|chemokine (C-X-C motif) ligand 2##BC053653|CXCL2|2920|chemokine (C-X-C motif) ligand 2##M36820|CXCL2|2920|chemokine (C-X-C motif) ligand 2##AK289455|EPGN|255324|epithelial mitogen homolog (mouse)##BC127938|EPGN|255324|epithelial mitogen homolog (mouse)##BC127939|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235269|EPGN|255324|epithelial mitogen homolog (mouse)##AY358920|EPGN|255324|epithelial mitogen homolog (mouse)##NM_001013442|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235264|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235265|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235266|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235267|EPGN|255324|epithelial mitogen homolog (mouse)##DQ235268|EPGN|255324|epithelial mitogen homolog (mouse)##AK314959|EREG|2069|epiregulin##D30783|EREG|2069|epiregulin##NM_001432|EREG|2069|epiregulin##BC035806|EREG|2069|epiregulin##BC136404|EREG|2069|epiregulin##BC136405|EREG|2069|epiregulin##CR541887|EREG|2069|epiregulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin	0.0	
chr6	157886455	157886566	reg1034069.p2	3.671	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-83971	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-141293	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-141926	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	357779	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	357864	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	516377	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.0	
chr6	21264304	21264385	reg1031668.p1	3.671	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-729621	+	CR749285 NM_001243076	-860311	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-862241	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	330028	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	402315	+	BC015850 NM_000948	1033385	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.0	
chr11	33934229	33934302	reg1036156.p2	3.670	+	NM_005574 X61118	-20430	-	TSC_hg19_v1_chr11_-_33891485 NM_001142315	-42769	-	BC042426 TSC_hg19_v1_chr11_-_33891402 BC034041 NM_001142316	-42874	-	TSC_hg19_v1_chr11_+_34073238 BC001731 NM_005898 NM_203364	138948	+	TSC_hg19_v1_chr11_+_34073889 AK299720	139639	+	TSC_hg19_v1_chr11_+_34073950 Z48042	139672	+	NM_005574|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##X61118|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142315|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC042426|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC034041|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##NM_001142316|LMO2|4005|LIM domain only 2 (rhombotin-like 1)##BC001731|CAPRIN1|4076|cell cycle associated protein 1##NM_005898|CAPRIN1|4076|cell cycle associated protein 1##NM_203364|CAPRIN1|4076|cell cycle associated protein 1##AK299720|CAPRIN1|4076|cell cycle associated protein 1##Z48042|CAPRIN1|4076|cell cycle associated protein 1	0.093173	
chr12	125249024	125249150	reg1035449.p1	3.670	+	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	-197012	-	TSC_hg19_v1_chr12_-_125002875 BC033087	-246228	-	AK126577 NM_181709	-475378	+	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	99218	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	99290	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	99386	-	AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1	0.930164	CTCF.p2:21:0.930
chr14	70105049	70105230	reg1038493.p2	3.670	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	-26748	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	-26829	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	-153659	+	TSC_hg19_v1_chr14_+_70233809 BX640605	128667	+	BC095420 TSC_hg19_v1_chr14_+_70233810	128671	+	TSC_hg19_v1_chr14_+_70233856 AK311805 NM_001039465 NM_006925	128695	+	D87434|KIAA0247|9766|KIAA0247##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BX640605|SRSF5|6430|serine/arginine-rich splicing factor 5##BC095420|SRSF5|6430|serine/arginine-rich splicing factor 5##AK311805|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_001039465|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_006925|SRSF5|6430|serine/arginine-rich splicing factor 5	0.0	
chr16	22207011	22207191	reg1017438.p1	3.670	+	AK098260 AK128606 AK307544 NM_173615	-103240	+	TSC_hg19_v1_chr16_+_22019464 NM_001164579 BC027604 BC053950	-187613	+	BC039562 BC021724 BC028605 NM_173806	-194673	-	TSC_hg19_v1_chr16_+_22217630 NM_013302 AK308757 BC032665	10572	+	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	101647	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	178694	-	AK098260|VWA3A|146177|von Willebrand factor A domain containing 3A##AK128606|VWA3A|146177|von Willebrand factor A domain containing 3A##AK307544|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_173615|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_001164579|C16orf52|730094|chromosome 16 open reading frame 52##BC027604|C16orf52|730094|chromosome 16 open reading frame 52##BC053950|C16orf52|730094|chromosome 16 open reading frame 52##BC039562|PDZD9|255762|PDZ domain containing 9##BC021724|PDZD9|255762|PDZ domain containing 9##BC028605|PDZD9|255762|PDZ domain containing 9##NM_173806|PDZD9|255762|PDZ domain containing 9##NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase##BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa	0.0	
chr20	48421811	48421939	reg1034759.p2	3.670	+	TSC_hg19_v1_chr20_-_48330471 NM_004776	-91409	-	AB004550 TSC_hg19_v1_chr20_-_48330359	-91519	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	-91645	-	NM_015266 TSC_hg19_v1_chr20_+_48429364 AK300318	7433	+	CR749638 TSC_hg19_v1_chr20_+_48429436 AB023156 BC112213 AK295803 AK308328 AK131001 AK295665 AK310530 AK295822	7543	+	AK289644 NM_001135773	108400	-	NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_015266|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK300318|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##CR749638|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AB023156|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##BC112213|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295803|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK308328|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK131001|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295665|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK310530|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295822|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK289644|SPATA2|9825|spermatogenesis associated 2##NM_001135773|SPATA2|9825|spermatogenesis associated 2	0.0	
chr2	70336066	70336236	reg1033523.p1	3.670	+	TSC_hg19_v1_chr2_+_70314983 BC013020	-21153	+	AK130439 TSC_hg19_v1_chr2_+_70314932	-21234	+	TSC_hg19_v1_chr2_+_70314854 Z29505 X78137 AB464656 CU691762	-21324	+	TSC_hg19_v1_chr2_-_70418137 BC002825 BC005079 AK000565 NM_017880	81970	-	CU677529 AB528896 BC015944 M77142 TSC_hg19_v1_chr2_-_70475711 NM_022037 NM_022173 AK303345	139568	-	TSC_hg19_v1_chr2_+_70485278 NM_016297 AF181490 BC051891 AY359063 BC033815 AK314453 AK225302 AK303043 BC022259 AB020715 DQ890801 DQ893956 CU689758	149099	+	AK130439|PCBP1|5093|poly(rC) binding protein 1##Z29505|PCBP1|5093|poly(rC) binding protein 1##X78137|PCBP1|5093|poly(rC) binding protein 1##BC002825|C2orf42|54980|chromosome 2 open reading frame 42##BC005079|C2orf42|54980|chromosome 2 open reading frame 42##AK000565|C2orf42|54980|chromosome 2 open reading frame 42##NM_017880|C2orf42|54980|chromosome 2 open reading frame 42##BC015944|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##M77142|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022037|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_022173|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##AK303345|TIA1|7072|TIA1 cytotoxic granule-associated RNA binding protein##NM_016297|PCYOX1|51449|prenylcysteine oxidase 1##AF181490|PCYOX1|51449|prenylcysteine oxidase 1##BC051891|PCYOX1|51449|prenylcysteine oxidase 1##AY359063|PCYOX1|51449|prenylcysteine oxidase 1##BC033815|PCYOX1|51449|prenylcysteine oxidase 1##AK314453|PCYOX1|51449|prenylcysteine oxidase 1##AK225302|PCYOX1|51449|prenylcysteine oxidase 1##AK303043|PCYOX1|51449|prenylcysteine oxidase 1##BC022259|PCYOX1|51449|prenylcysteine oxidase 1##AB020715|PCYOX1|51449|prenylcysteine oxidase 1##DQ890801|PCYOX1|51449|prenylcysteine oxidase 1##DQ893956|PCYOX1|51449|prenylcysteine oxidase 1	0.0	
chr4	167941695	167941795	reg1036058.p1	3.670	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-1147291	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-1641588	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-1692890	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	213866	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	213959	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	213995	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.051634	
chr7	50237130	50237199	reg1034884.p1	3.670	+	NM_001161834	-101483	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	-104340	-	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-423894	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	107189	+	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	111155	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	280890	-	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1	0.0	
chr9	37402745	37402822	reg1037434.p1	3.670	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-282200	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-282275	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-282297	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	19923	+	BC010007 TSC_hg19_v1_chr9_-_37465267	62477	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	62612	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.0	
chr11	32319250	32319344	reg1040905.p1	3.669	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	-206598	+	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	-206820	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-479819	-	AK093168 BC032861 NM_001198551 NM_001198552	133063	-	TSC_hg19_v1_chr11_-_32456950 BC046461	137642	-	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	137772	-	BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1##BC046461|WT1|7490|Wilms tumor 1##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1	0.073867	
chr1	179058131	179058213	reg1042213.p2	3.669	+	TSC_hg19_v1_chr1_+_179051236 BC011746 AK316530 AK299966 CU675711 CU676228 CR457354	-6924	+	BC088368 BC001085 TSC_hg19_v1_chr1_+_179051232 BC018292 AJ299403 AJ299441 BC007571 AK025998	-6947	+	NM_022371 TSC_hg19_v1_chr1_+_179051147	-7038	+	FJ542283 BC065912 AK225255 TSC_hg19_v1_chr1_-_179112210 AK309549 NM_001136000 NM_001168239 NM_005158	54028	-	M35296 TSC_hg19_v1_chr1_-_179198813	140602	-	TSC_hg19_v1_chr1_-_179198815 AK311045 NM_001136001 NM_001168236 NM_001168237 NM_001168238 NM_007314	140647	-	BC011746|TOR3A|64222|torsin family 3, member A##AK316530|TOR3A|64222|torsin family 3, member A##AK299966|TOR3A|64222|torsin family 3, member A##CR457354|TOR3A|64222|torsin family 3, member A##BC088368|TOR3A|64222|torsin family 3, member A##BC001085|TOR3A|64222|torsin family 3, member A##BC018292|TOR3A|64222|torsin family 3, member A##AJ299403|TOR3A|64222|torsin family 3, member A##AJ299441|TOR3A|64222|torsin family 3, member A##BC007571|TOR3A|64222|torsin family 3, member A##AK025998|TOR3A|64222|torsin family 3, member A##NM_022371|TOR3A|64222|torsin family 3, member A##FJ542283|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##BC065912|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK225255|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK309549|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001136000|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168239|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_005158|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##M35296|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##AK311045|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001136001|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168236|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168237|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_001168238|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2##NM_007314|ABL2|27|v-abl Abelson murine leukemia viral oncogene homolog 2	0.0	
chr14	68487692	68487818	reg1035664.p1	3.669	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-201235	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-204456	-	AK315462 NM_152443	-319153	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	771965	-	NM_001244698 NM_004926	772875	-	NM_001244701 AB528867	775229	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr15	41163952	41164119	reg1023766.p1	3.669	+	TSC_hg19_v1_chr15_+_41136676 NM_001032367 AK303899 BC004140 BT007425 CU676280 DQ890747 DQ892293 DQ895493	-27334	+	TSC_hg19_v1_chr15_+_41136245 AK314825 AK300195 NM_003710 NM_181642 BC018702 AY358969 AB000095 AY296715	-27685	+	AK000258 BC096716 BC098124 BC098150 BC098341 NM_001130143 NM_017726	-43130	-	AY059636 BC112945 BC019353 BC105020 BC105022 AB079131 NM_133639 TSC_hg19_v1_chr15_-_41166557	2412	-	TSC_hg19_v1_chr15_+_41186647 AL713725 NM_020857 AB040908 AF308802 BC001513	22665	+	NM_019074 TSC_hg19_v1_chr15_+_41221537 AK313831 AK308755 AB036931 BC106950 AY358894 AB043894 AF253468	57663	+	NM_001032367|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK303899|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC004140|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BT007425|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ890747|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ892293|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##DQ895493|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK314825|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK300195|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_003710|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##NM_181642|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##BC018702|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY358969|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AB000095|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AY296715|SPINT1|6692|serine peptidase inhibitor, Kunitz type 1##AK000258|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC096716|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098124|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098150|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##BC098341|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##NM_001130143|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##NM_017726|PPP1R14D|54866|protein phosphatase 1, regulatory (inhibitor) subunit 14D##AY059636|RHOV|171177|ras homolog gene family, member V##BC112945|RHOV|171177|ras homolog gene family, member V##BC019353|RHOV|171177|ras homolog gene family, member V##BC105020|RHOV|171177|ras homolog gene family, member V##BC105022|RHOV|171177|ras homolog gene family, member V##AB079131|RHOV|171177|ras homolog gene family, member V##NM_133639|RHOV|171177|ras homolog gene family, member V##AL713725|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_020857|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AB040908|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##AF308802|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##BC001513|VPS18|57617|vacuolar protein sorting 18 homolog (S. cerevisiae)##NM_019074|DLL4|54567|delta-like 4 (Drosophila)##AK313831|DLL4|54567|delta-like 4 (Drosophila)##AK308755|DLL4|54567|delta-like 4 (Drosophila)##AB036931|DLL4|54567|delta-like 4 (Drosophila)##BC106950|DLL4|54567|delta-like 4 (Drosophila)##AY358894|DLL4|54567|delta-like 4 (Drosophila)##AB043894|DLL4|54567|delta-like 4 (Drosophila)##AF253468|DLL4|54567|delta-like 4 (Drosophila)	0.0	
chr16	89098518	89098636	reg1040459.p1	3.669	+	AB527670 EU446890 BC047019 AK314766 AB010419 BC062624 NM_005187 TSC_hg19_v1_chr16_-_89043569	-55174	-	AB010420 NM_175931	-90971	-	AB528852 EU190484 BC130001 BC130002 NM_001080487	-165536	-	TSC_hg19_v1_chr16_-_89119364 AK055272	20792	-	NM_001127214 NM_001243279 NM_174917 TSC_hg19_v1_chr16_+_89160259	61660	+	TSC_hg19_v1_chr16_+_89160285 BC028399 AK290963 BC064609 BC072391 AK075499	61730	+	EU446890|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC047019|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AK314766|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010419|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC062624|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_005187|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##EU190484|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130001|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130002|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001080487|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001127214|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001243279|ACSF3|197322|acyl-CoA synthetase family member 3##NM_174917|ACSF3|197322|acyl-CoA synthetase family member 3##BC028399|ACSF3|197322|acyl-CoA synthetase family member 3##AK290963|ACSF3|197322|acyl-CoA synthetase family member 3##BC064609|ACSF3|197322|acyl-CoA synthetase family member 3##BC072391|ACSF3|197322|acyl-CoA synthetase family member 3##AK075499|ACSF3|197322|acyl-CoA synthetase family member 3	0.0	
chr17	56416509	56416622	reg1040008.p1	3.669	+	TSC_hg19_v1_chr17_+_56414668 AK000271 BC050403 BC032475	-1876	+	AK311306 TSC_hg19_v1_chr17_+_56414566 BC064565	-1996	+	AX721088 TSC_hg19_v1_chr17_-_56409882	-6688	-	AB527904 CR407663 EU446710 TSC_hg19_v1_chr17_-_56429531 AK311986 U38817 BC002802 U38818 NM_003168 U43923 AK129758	12971	-	AB527734 TSC_hg19_v1_chr17_-_56492959 AK296769 AK000322 BC109028	76471	-	TSC_hg19_v1_chr17_-_56494896 CR749257	78328	-	AK000271|LOC100506779|100506779|uncharacterized LOC100506779##BC050403|LOC100506779|100506779|uncharacterized LOC100506779##BC032475|LOC100506779|100506779|uncharacterized LOC100506779##AK311306|LOC100506779|100506779|uncharacterized LOC100506779##BC064565|LOC100506779|100506779|uncharacterized LOC100506779##CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK296769|RNF43|54894|ring finger protein 43##AK000322|RNF43|54894|ring finger protein 43##BC109028|RNF43|54894|ring finger protein 43##CR749257|RNF43|54894|ring finger protein 43	0.040895	
chr3	45902800	45902980	reg1037258.p2	3.669	+	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	-19295	-	TSC_hg19_v1_chr3_-_45838112 AF125107	-64742	-	BC036073 TSC_hg19_v1_chr3_-_45838029 NM_020208 NM_022405	-64860	-	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	25165	+	NM_006564 Y13248	82082	+	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	134431	-	BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC036073|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_020208|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_022405|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1	0.0	
chr3	48447292	48447358	reg1037083.p1	3.669	+	AY247969 NM_001159927 NM_001159929 NM_207102 BC101303 BC101304 BC101305 BC101306	-33589	+	NM_001080525	-77495	-	DQ892283 DQ895483 AK308970 AF051941 TSC_hg19_v1_chr3_-_48342858 U90449 BC001808 BC012828 NM_005793 AK222555 AK294809 AK307332 AK297364 AK309090	-104474	-	TSC_hg19_v1_chr3_-_48471023 AB007867 BC146793 NM_002673	23555	-	TSC_hg19_v1_chr3_-_48471516 BC066773 NM_001130082 AK296776	24172	-	BC011993 AK022498 NM_024661	34198	-	AY247969|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159927|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001159929|FBXW12|285231|F-box and WD repeat domain containing 12##NM_207102|FBXW12|285231|F-box and WD repeat domain containing 12##BC101303|FBXW12|285231|F-box and WD repeat domain containing 12##BC101304|FBXW12|285231|F-box and WD repeat domain containing 12##BC101305|FBXW12|285231|F-box and WD repeat domain containing 12##BC101306|FBXW12|285231|F-box and WD repeat domain containing 12##NM_001080525|SPINK8|646424|serine peptidase inhibitor, Kazal type 8 (putative)##DQ892283|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##DQ895483|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK308970|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AF051941|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##U90449|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC001808|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##BC012828|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##NM_005793|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK222555|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK294809|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AK297364|NME6|10201|non-metastatic cells 6, protein expressed in (nucleoside-diphosphate kinase)##AB007867|PLXNB1|5364|plexin B1##BC146793|PLXNB1|5364|plexin B1##NM_002673|PLXNB1|5364|plexin B1##BC066773|PLXNB1|5364|plexin B1##NM_001130082|PLXNB1|5364|plexin B1##AK296776|PLXNB1|5364|plexin B1##BC011993|CCDC51|79714|coiled-coil domain containing 51##AK022498|CCDC51|79714|coiled-coil domain containing 51##NM_024661|CCDC51|79714|coiled-coil domain containing 51	0.0	
chr5	133747827	133747894	reg1010931.p2	3.669	+	TSC_hg19_v1_chr5_-_133747599 NM_080656	-261	-	TSC_hg19_v1_chr5_-_133747573 BC018086 BC008293	-306	-	TSC_hg19_v1_chr5_+_133707159 BC008404 BC008470 AK312012 X53251 BC005979 AB590169 DQ893113 DQ896387 BT007071 CR407634	-40664	+	TSC_hg19_v1_chr5_+_133842276 BC032795	94430	+	TSC_hg19_v1_chr5_+_133861359 AK056471 BC021962 AK292635 AK074123	113503	+	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	113945	+	NM_080656|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like##BC018086|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like##BC008293|CDKN2AIPNL|91368|CDKN2A interacting protein N-terminal like##BC008404|UBE2B|7320|ubiquitin-conjugating enzyme E2B##BC008470|UBE2B|7320|ubiquitin-conjugating enzyme E2B##AK312012|UBE2B|7320|ubiquitin-conjugating enzyme E2B##X53251|UBE2B|7320|ubiquitin-conjugating enzyme E2B##BC005979|UBE2B|7320|ubiquitin-conjugating enzyme E2B##DQ893113|UBE2B|7320|ubiquitin-conjugating enzyme E2B##DQ896387|UBE2B|7320|ubiquitin-conjugating enzyme E2B##BT007071|UBE2B|7320|ubiquitin-conjugating enzyme E2B##CR407634|UBE2B|7320|ubiquitin-conjugating enzyme E2B##AK056471|PHF15|23338|PHD finger protein 15##BC021962|PHF15|23338|PHD finger protein 15##AK292635|PHF15|23338|PHD finger protein 15##AK074123|PHF15|23338|PHD finger protein 15##D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15	0.026374	
chr5	67542743	67542864	reg1036143.p1	3.669	+	TSC_hg19_v1_chr5_+_67511602 BC094795	-31196	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	-31223	+	BC109069 BC109070 D83597 NM_005582 AK313177	-1050203	-	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	41491	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	43743	+	AK094785 NM_001242466 AK294919	45649	+	BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.593085	CTCF.p2:28:0.593
chr6	36326139	36326224	reg1033039.p1	3.669	+	BC140873 BX648558 NM_001010903 TSC_hg19_v1_chr6_-_36304663	-21556	-	AM182887 FJ457781 NM_001145717	-87945	+	AK096074 NM_173676 BC103905 BC103906 BC103907 NM_001145716	-115220	+	AF175387 AF218365 AF116508 AF116509 AF116510 AF218235 AF218366 BC035853 AK301011 AF147782 AK223424 AJ276205 AK026144 NM_001207038 AK303829 NM_001207035 NM_001207036 NM_001207037 NM_001207039 NM_001207040 NM_001207041 NM_016135	29278	-	BC031105 NM_152990	84484	-	AY305862 NM_173562 TSC_hg19_v1_chr6_+_36410797 AK295717 AK316456	84489	+	BC140873|C6orf222|389384|chromosome 6 open reading frame 222##BX648558|C6orf222|389384|chromosome 6 open reading frame 222##NM_001010903|C6orf222|389384|chromosome 6 open reading frame 222##AM182887|PNPLA1|285848|patatin-like phospholipase domain containing 1##FJ457781|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145717|PNPLA1|285848|patatin-like phospholipase domain containing 1##AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1##AF175387|ETV7|51513|ets variant 7##AF218365|ETV7|51513|ets variant 7##AF116508|ETV7|51513|ets variant 7##AF116509|ETV7|51513|ets variant 7##AF116510|ETV7|51513|ets variant 7##AF218235|ETV7|51513|ets variant 7##AF218366|ETV7|51513|ets variant 7##BC035853|ETV7|51513|ets variant 7##AK301011|ETV7|51513|ets variant 7##AF147782|ETV7|51513|ets variant 7##AK223424|ETV7|51513|ets variant 7##AJ276205|ETV7|51513|ets variant 7##AK026144|ETV7|51513|ets variant 7##NM_001207038|ETV7|51513|ets variant 7##AK303829|ETV7|51513|ets variant 7##NM_001207035|ETV7|51513|ets variant 7##NM_001207036|ETV7|51513|ets variant 7##NM_001207037|ETV7|51513|ets variant 7##NM_001207039|ETV7|51513|ets variant 7##NM_001207040|ETV7|51513|ets variant 7##NM_001207041|ETV7|51513|ets variant 7##NM_016135|ETV7|51513|ets variant 7##BC031105|PXT1|222659|peroxisomal, testis specific 1##NM_152990|PXT1|222659|peroxisomal, testis specific 1##AY305862|KCTD20|222658|potassium channel tetramerisation domain containing 20##NM_173562|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK295717|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK316456|KCTD20|222658|potassium channel tetramerisation domain containing 20	0.0	
chr7	143042638	143042733	reg1031001.p2	3.669	+	NM_000083 Z25884 BC112156 BC113495 BC143796 AB462980	-29424	+	NM_001224 U13022	-56005	+	TSC_hg19_v1_chr7_+_142985534 AK291274 BC002427 AK303391 AB590463 CU677954 U13021 AF314174 BT007240 DQ893820	-57155	+	TSC_hg19_v1_chr7_+_143058809 AK316227	16116	+	AK291470 BC050543 NM_014690	16473	-	CU692276 AB384523 TSC_hg19_v1_chr7_-_143059807 AK124557 NM_001031690 BC045611	17090	-	NM_000083|CLCN1|1180|chloride channel 1, skeletal muscle##Z25884|CLCN1|1180|chloride channel 1, skeletal muscle##BC112156|CLCN1|1180|chloride channel 1, skeletal muscle##BC113495|CLCN1|1180|chloride channel 1, skeletal muscle##BC143796|CLCN1|1180|chloride channel 1, skeletal muscle##NM_001224|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##U13022|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##AK291274|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##BC002427|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##AK303391|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##U13021|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##AF314174|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##BT007240|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##DQ893820|CASP2|835|caspase 2, apoptosis-related cysteine peptidase##AK316227|ZYX|7791|zyxin##AK291470|FAM131B|9715|family with sequence similarity 131, member B##BC050543|FAM131B|9715|family with sequence similarity 131, member B##NM_014690|FAM131B|9715|family with sequence similarity 131, member B##AK124557|FAM131B|9715|family with sequence similarity 131, member B##NM_001031690|FAM131B|9715|family with sequence similarity 131, member B##BC045611|FAM131B|9715|family with sequence similarity 131, member B	0.033275	
chr10	76510578	76510717	reg1016536.p1	3.668	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-574060	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-574117	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-574165	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	75707	+	AY686755 NM_001003892 BC137321 BC137322	307658	-	AB027004 AB103375 NM_016364	348600	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr11	76383868	76383957	reg1039623.p2	3.668	+	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	-2103	-	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	-2944	-	TSC_hg19_v1_chr11_+_76156061 AK304043 BC033404 NM_020193 AK309621 BC021688 AK125114	-227809	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	110365	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	188020	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	188081	+	BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##AK304043|C11orf30|56946|chromosome 11 open reading frame 30##BC033404|C11orf30|56946|chromosome 11 open reading frame 30##NM_020193|C11orf30|56946|chromosome 11 open reading frame 30##AK309621|C11orf30|56946|chromosome 11 open reading frame 30##BC021688|C11orf30|56946|chromosome 11 open reading frame 30##AK125114|C11orf30|56946|chromosome 11 open reading frame 30##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3	0.0	
chr14	91504845	91504973	reg1037810.p1	3.668	+	NM_001010854 TSC_hg19_v1_chr14_-_91282765	-222144	-	AB527232 TSC_hg19_v1_chr14_-_91282750	-222211	-	TSC_hg19_v1_chr14_+_90863372 BC011834 BC047523 U16851 BC000454 BC008597 AK289937 M27319	-641482	+	TSC_hg19_v1_chr14_-_91526731 CU677851	21845	-	TSC_hg19_v1_chr14_-_91526968 AF090421 AF074393 AF080000 BC017187 AK309925 NM_004755 NM_182398	22061	-	NM_001102366 NM_001102368 NM_001102369 NM_024952 TSC_hg19_v1_chr14_+_91580416 AK097294 AK098752 BX537970 BX161393 BX247989 BC009182 AK308857 AB210031	75496	+	NM_001010854|TTC7B|145567|tetratricopeptide repeat domain 7B##BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AF090421|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##AF074393|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##AF080000|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##BC017187|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##AK309925|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##NM_004755|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##NM_182398|RPS6KA5|9252|ribosomal protein S6 kinase, 90kDa, polypeptide 5##NM_001102366|C14orf159|80017|chromosome 14 open reading frame 159##NM_001102368|C14orf159|80017|chromosome 14 open reading frame 159##NM_001102369|C14orf159|80017|chromosome 14 open reading frame 159##NM_024952|C14orf159|80017|chromosome 14 open reading frame 159##AK097294|C14orf159|80017|chromosome 14 open reading frame 159##AK098752|C14orf159|80017|chromosome 14 open reading frame 159##BX537970|C14orf159|80017|chromosome 14 open reading frame 159##BX161393|C14orf159|80017|chromosome 14 open reading frame 159##BX247989|C14orf159|80017|chromosome 14 open reading frame 159##BC009182|C14orf159|80017|chromosome 14 open reading frame 159##AK308857|C14orf159|80017|chromosome 14 open reading frame 159##AB210031|C14orf159|80017|chromosome 14 open reading frame 159	0.029319	
chr15	52397034	52397154	reg1034420.p2	3.668	+	TSC_hg19_v1_chr15_+_52311442 BC035492	-85633	+	TSC_hg19_v1_chr15_+_52311432 CR749401	-85660	+	TSC_hg19_v1_chr15_+_52311425 NM_002748	-85675	+	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	7852	-	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	75047	-	TSC_hg19_v1_chr15_+_52472257 AF007131	75241	+	BC035492|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##NM_002748|MAPK6|5597|mitogen-activated protein kinase 6##AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973	0.0	
chr15	82981918	82982049	reg1040506.p1	3.668	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	-37093	+	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	-37191	+	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	-157090	-	CR936602 NM_001164465	36195	-	NM_198181 CR936812	116758	+	BC009407 BC020453 BC019899 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	227253	-	BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##CR936602|LOC643696|643696|uncharacterized LOC643696##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC009407|RPS17|6218|ribosomal protein S17##BC020453|RPS17|6218|ribosomal protein S17##BC019899|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17	0.315969	CTCF.p2:23:0.316
chr18	3322981	3323089	reg1034652.p1	3.668	+	NM_001144944 NM_001144945	-60372	+	TSC_hg19_v1_chr18_+_3262184 BC004994	-60838	+	NM_033546 AY320408 TSC_hg19_v1_chr18_+_3262134 AK291726 U26162 D50372 D82058	-60890	+	NM_174886	89036	+	NM_173207 AK291112	124582	+	NM_173209 NM_173208 TSC_hg19_v1_chr18_+_3450174 NM_003244 AK309471 X89750	127045	+	NM_001144944|MYL12B|103910|myosin, light chain 12B, regulatory##NM_001144945|MYL12B|103910|myosin, light chain 12B, regulatory##BC004994|MYL12B|103910|myosin, light chain 12B, regulatory##NM_033546|MYL12B|103910|myosin, light chain 12B, regulatory##AY320408|MYL12B|103910|myosin, light chain 12B, regulatory##AK291726|MYL12B|103910|myosin, light chain 12B, regulatory##U26162|MYL12B|103910|myosin, light chain 12B, regulatory##D50372|MYL12B|103910|myosin, light chain 12B, regulatory##D82058|MYL12B|103910|myosin, light chain 12B, regulatory##NM_174886|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173207|TGIF1|7050|TGFB-induced factor homeobox 1##AK291112|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1##NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1##AK309471|TGIF1|7050|TGFB-induced factor homeobox 1##X89750|TGIF1|7050|TGFB-induced factor homeobox 1	0.969899	CTCF.p2:51:0.970
chr3	5036573	5036639	reg1038763.p1	3.668	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-15252	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	-15425	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	-15490	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	127349	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	127485	+	TSC_hg19_v1_chr3_+_5229344 AK298511	192721	+	AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	0.0	
chr5	149535132	149535199	reg1030514.p1	3.668	+	NM_005211 X03663	-42231	-	TSC_hg19_v1_chr5_-_149466188 BC047521 AK304491 M25786	-68932	-	TSC_hg19_v1_chr5_-_149466131 AB208819	-69019	-	M21616 TSC_hg19_v1_chr5_-_149535251 AK293093	39	-	J03278 M30493 TSC_hg19_v1_chr5_-_149535344	170	-	BC032224 AB209657 NM_002609 TSC_hg19_v1_chr5_-_149535428	259	-	NM_005211|CSF1R|1436|colony stimulating factor 1 receptor##X03663|CSF1R|1436|colony stimulating factor 1 receptor##BC047521|CSF1R|1436|colony stimulating factor 1 receptor##AK304491|CSF1R|1436|colony stimulating factor 1 receptor##M25786|CSF1R|1436|colony stimulating factor 1 receptor##AB208819|CSF1R|1436|colony stimulating factor 1 receptor##M21616|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AK293093|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##J03278|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##M30493|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##BC032224|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AB209657|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##NM_002609|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide	0.0	
chr5	60496608	60496678	reg1045104.p2	3.668	+	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	-38376	-	BC146876 BC146881 BC014242 BC047489 TSC_hg19_v1_chr5_-_60458209	-38465	-	TSC_hg19_v1_chr5_+_60241003 AK026051 NM_174889 AF087990 AK291296 BC001753 BC070357 BC033965 AB183433	-255631	+	TSC_hg19_v1_chr5_+_60628085 NM_020928	131455	+	AK094862 NM_173667	436992	+	TSC_hg19_v1_chr5_+_61601970 NM_001098511 NM_001243952 NM_001243953 NM_004520	1105330	+	BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##BC146876|C5orf43|643155|chromosome 5 open reading frame 43##BC146881|C5orf43|643155|chromosome 5 open reading frame 43##BC014242|C5orf43|643155|chromosome 5 open reading frame 43##BC047489|C5orf43|643155|chromosome 5 open reading frame 43##AK026051|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_174889|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AF087990|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AK291296|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC001753|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC070357|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC033965|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AB183433|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6##AK094862|C5orf64|285668|chromosome 5 open reading frame 64##NM_173667|C5orf64|285668|chromosome 5 open reading frame 64##NM_001098511|KIF2A|3796|kinesin heavy chain member 2A##NM_001243952|KIF2A|3796|kinesin heavy chain member 2A##NM_001243953|KIF2A|3796|kinesin heavy chain member 2A##NM_004520|KIF2A|3796|kinesin heavy chain member 2A	0.0	
chr6	139696924	139697056	reg1033755.p2	3.668	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-1206	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-1229	-	NM_001168389 NM_001168388	-1567	-	BC095542 GU727635 M73482 NM_002511	2712874	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	2771400	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	2771416	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.0	
chr8	71316204	71316384	reg1039361.p1	3.668	+	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	-268	-	BC092442 TSC_hg19_v1_chr8_-_71315599	-747	-	TSC_hg19_v1_chr8_-_70983549 AF319458 AK022595 NM_024504	-332739	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	204228	-	TSC_hg19_v1_chr8_-_71520654 AK303411 NM_014294	204362	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	265090	-	NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##BC092442|NCOA2|10499|nuclear receptor coactivator 2##AF319458|PRDM14|63978|PR domain containing 14##AK022595|PRDM14|63978|PR domain containing 14##NM_024504|PRDM14|63978|PR domain containing 14##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1##AK303411|TRAM1|23471|translocation associated membrane protein 1##NM_014294|TRAM1|23471|translocation associated membrane protein 1##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2	0.0	
chr9	122138281	122138417	reg1034922.p2	3.668	+	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	-6691	-	TSC_hg19_v1_chr9_+_120466680 U93091 BC025294 AK226155 U88880 BC117422 BC143841 AB445638	-1671662	+	TSC_hg19_v1_chr9_+_120466621 AK293068 AK303730	-1671735	+	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	1204004	-	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	1338368	-	AF176698 TSC_hg19_v1_chr9_-_123555558	1417196	-	BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##U93091|TLR4|7099|toll-like receptor 4##BC025294|TLR4|7099|toll-like receptor 4##AK226155|TLR4|7099|toll-like receptor 4##U88880|TLR4|7099|toll-like receptor 4##BC117422|TLR4|7099|toll-like receptor 4##BC143841|TLR4|7099|toll-like receptor 4##AB445638|TLR4|7099|toll-like receptor 4##AK293068|TLR4|7099|toll-like receptor 4##AK303730|TLR4|7099|toll-like receptor 4##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9##AF176698|FBXW2|26190|F-box and WD repeat domain containing 2	0.330795	CTCF.p2:-11:0.331
chr9	37430941	37431037	reg1037112.p1	3.668	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	-8283	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-310406	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-310481	+	BC010007 TSC_hg19_v1_chr9_-_37465267	34271	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	34406	-	TSC_hg19_v1_chr9_-_37465448 AK292404	34452	-	AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5##AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5	0.303436	CTCF.p2:0:0.303
chr11	2923920	2923993	reg1034592.p1	3.667	+	TSC_hg19_v1_chr11_+_2923559 AF030302	-352	+	TSC_hg19_v1_chr11_+_2923528 AB012083 AF028738 AF059663 AF070479 AF037064	-420	+	TSC_hg19_v1_chr11_+_2923507 NM_002555	-454	+	TSC_hg19_v1_chr11_+_2924568 CU677351 EU176788	587	+	NM_007105	1218	-	CR407664 AB464031 CU674965 AF019953 TSC_hg19_v1_chr11_-_2950651 BC005034 AF001294 AF035444 AK223027 NM_003311	26669	-	AF030302|SLC22A18|5002|solute carrier family 22, member 18##AB012083|SLC22A18|5002|solute carrier family 22, member 18##AF028738|SLC22A18|5002|solute carrier family 22, member 18##AF059663|SLC22A18|5002|solute carrier family 22, member 18##AF070479|SLC22A18|5002|solute carrier family 22, member 18##AF037064|SLC22A18|5002|solute carrier family 22, member 18##NM_002555|SLC22A18|5002|solute carrier family 22, member 18##EU176788|SLC22A18|5002|solute carrier family 22, member 18##NM_007105|SLC22A18AS|5003|solute carrier family 22 (organic cation transporter), member 18 antisense##CR407664|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AF019953|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##BC005034|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AF001294|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AF035444|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AK223027|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##NM_003311|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2	0.083295	
chr11	44631093	44631273	reg1032331.p2	3.667	+	TSC_hg19_v1_chr11_+_44587214 AK225410 AK312677 S48196 U20770 X53795 BC000726 BC001821	-43956	+	NM_001024844 NM_002231 TSC_hg19_v1_chr11_+_44587187 AK225708	-44018	+	AB385504 AB058691 AJ404888 AF294629 NM_021926 AK092346	-299507	-	NM_130783	154792	+	TSC_hg19_v1_chr11_-_44956087 AF010315	324924	-	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	341234	-	AK225410|CD82|3732|CD82 molecule##AK312677|CD82|3732|CD82 molecule##S48196|CD82|3732|CD82 molecule##U20770|CD82|3732|CD82 molecule##BC000726|CD82|3732|CD82 molecule##BC001821|CD82|3732|CD82 molecule##NM_001024844|CD82|3732|CD82 molecule##NM_002231|CD82|3732|CD82 molecule##AK225708|CD82|3732|CD82 molecule##AB058691|ALX4|60529|ALX homeobox 4##AJ404888|ALX4|60529|ALX homeobox 4##AF294629|ALX4|60529|ALX homeobox 4##NM_021926|ALX4|60529|ALX homeobox 4##AK092346|ALX4|60529|ALX homeobox 4##NM_130783|TSPAN18|90139|tetraspanin 18##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11	0.0	
chr1	1655710	1655891	reg1023622.p1	3.667	+	TSC_hg19_v1_chr1_-_1655767 AK303446 AF067518 AF067519 AF067520 AF067521 AF067522 AF067523 AK301495 AK304679 BC009375 AF067512 AF067513 AF067514 AF067515 AF067516 AF067517 AK303451 NM_033486 NM_033487 NM_033488 NM_033489 NM_033492 NM_033493 U04816 U04817 U04818 U04824 U07704 U07705 NM_024011 NM_033529	-24	-	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	-31583	-	BC092507 TSC_hg19_v1_chr1_-_1624149 AK125619	-31642	-	AL049665 NM_001199787 NM_182838 TSC_hg19_v1_chr1_-_1677454 BC110653	21661	-	AK296722 NM_001198995	34280	-	TSC_hg19_v1_chr1_-_1709864 AK291728 AK290161 AK023114 NM_023018	54086	-	AK303446|CDK11B|984|cyclin-dependent kinase 11B##AF067518|CDK11A|728642|cyclin-dependent kinase 11A##AF067519|CDK11A|728642|cyclin-dependent kinase 11A##AF067520|CDK11A|728642|cyclin-dependent kinase 11A##AF067521|CDK11A|728642|cyclin-dependent kinase 11A##AF067522|CDK11A|728642|cyclin-dependent kinase 11A##AF067523|CDK11A|728642|cyclin-dependent kinase 11A##AK301495|CDK11B|984|cyclin-dependent kinase 11B##AK304679|CDK11B|984|cyclin-dependent kinase 11B##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AF067512|CDK11B|984|cyclin-dependent kinase 11B##AF067513|CDK11B|984|cyclin-dependent kinase 11B##AF067514|CDK11B|984|cyclin-dependent kinase 11B##AF067515|CDK11B|984|cyclin-dependent kinase 11B##AF067516|CDK11B|984|cyclin-dependent kinase 11B##AF067517|CDK11B|984|cyclin-dependent kinase 11B##AK303451|CDK11B|984|cyclin-dependent kinase 11B##NM_033486|CDK11B|984|cyclin-dependent kinase 11B##NM_033487|CDK11B|984|cyclin-dependent kinase 11B##NM_033488|CDK11B|984|cyclin-dependent kinase 11B##NM_033489|CDK11B|984|cyclin-dependent kinase 11B##NM_033492|CDK11B|984|cyclin-dependent kinase 11B##NM_033493|CDK11B|984|cyclin-dependent kinase 11B##U04816|CDK11B|984|cyclin-dependent kinase 11B##U04817|CDK11B|984|cyclin-dependent kinase 11B##U04818|CDK11B|984|cyclin-dependent kinase 11B##U04824|CDK11B|984|cyclin-dependent kinase 11B##U07704|CDK11A|728642|cyclin-dependent kinase 11A##U07705|CDK11A|728642|cyclin-dependent kinase 11A##NM_024011|CDK11A|728642|cyclin-dependent kinase 11A##NM_033529|CDK11A|728642|cyclin-dependent kinase 11A##AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B##BC092507|SLC35E2B|728661|solute carrier family 35, member E2B##AK125619|SLC35E2B|728661|solute carrier family 35, member E2B##AL049665|SLC35E2|9906|solute carrier family 35, member E2##NM_001199787|SLC35E2|9906|solute carrier family 35, member E2##NM_182838|SLC35E2|9906|solute carrier family 35, member E2##BC110653|SLC35E2B|728661|solute carrier family 35, member E2B##AK296722|NADK|65220|NAD kinase##NM_001198995|NADK|65220|NAD kinase##AK291728|NADK|65220|NAD kinase##AK290161|NADK|65220|NAD kinase##AK023114|NADK|65220|NAD kinase##NM_023018|NADK|65220|NAD kinase	0.0	
chr1	211555720	211555879	reg1038214.p1	3.667	+	BC029600 NM_145759	-36094	+	TSC_hg19_v1_chr1_+_211500174 AK295766 AK303286 AB000509	-55612	+	NM_001033910 TSC_hg19_v1_chr1_+_211500158	-55646	+	TSC_hg19_v1_chr1_+_211556144 AK130858	348	+	TSC_hg19_v1_chr1_+_211556168 BC005997	369	+	AY191519 NM_001164688 NM_183059	110459	-	BC029600|TRAF5|7188|TNF receptor-associated factor 5##NM_145759|TRAF5|7188|TNF receptor-associated factor 5##AK295766|TRAF5|7188|TNF receptor-associated factor 5##AK303286|TRAF5|7188|TNF receptor-associated factor 5##AB000509|TRAF5|7188|TNF receptor-associated factor 5##NM_001033910|TRAF5|7188|TNF receptor-associated factor 5##AK130858|LINC00467|84791|long intergenic non-protein coding RNA 467##BC005997|LINC00467|84791|long intergenic non-protein coding RNA 467##AY191519|RD3|343035|retinal degeneration 3##NM_001164688|RD3|343035|retinal degeneration 3##NM_183059|RD3|343035|retinal degeneration 3	0.0	
chr1	325084	325208	reg1029324.p2	3.667	+	NM_001005484	-256056	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-295741	-	None	None	None	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	42502	+	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	296896	-	TSC_hg19_v1_chr1_-_714015 BC006361	388871	-	NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene	1.038857	CTCF.p2:9:0.988
chr20	39878085	39878194	reg1007797.p1	3.667	+	TSC_hg19_v1_chr20_-_39766625 BC035080	-111531	-	TSC_hg19_v1_chr20_+_39766146 NM_002660 NM_182811 BC136466 BC144136 M34667	-111951	+	TSC_hg19_v1_chr20_+_39765861 AB210028	-112277	+	AK122905 AK097523 AB081948 BC047070 AK292415 NM_015035	50584	-	TSC_hg19_v1_chr20_-_39946149 AB007855	68076	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	91376	+	NM_002660|PLCG1|5335|phospholipase C, gamma 1##NM_182811|PLCG1|5335|phospholipase C, gamma 1##BC136466|PLCG1|5335|phospholipase C, gamma 1##BC144136|PLCG1|5335|phospholipase C, gamma 1##M34667|PLCG1|5335|phospholipase C, gamma 1##AB210028|PLCG1|5335|phospholipase C, gamma 1##AK122905|ZHX3|23051|zinc fingers and homeoboxes 3##AK097523|ZHX3|23051|zinc fingers and homeoboxes 3##AB081948|ZHX3|23051|zinc fingers and homeoboxes 3##BC047070|ZHX3|23051|zinc fingers and homeoboxes 3##AK292415|ZHX3|23051|zinc fingers and homeoboxes 3##NM_015035|ZHX3|23051|zinc fingers and homeoboxes 3##AB007855|ZHX3|23051|zinc fingers and homeoboxes 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3	0.0	
chr20	49110743	49110826	reg1040373.p2	3.667	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	-303154	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	-303403	+	NM_005194 TSC_hg19_v1_chr20_+_48807197	-303591	+	TSC_hg19_v1_chr20_+_49126895 AK290638 NM_002827	16092	+	TSC_hg19_v1_chr20_+_49126916 AK316563	16129	+	AK299830 TSC_hg19_v1_chr20_+_49126919	16135	+	EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK290638|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##NM_002827|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK316563|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1	0.0	
chr8	39823911	39824049	reg1035750.p1	3.667	+	AK128691 NM_194294	-31507	+	NM_002164 AK313259 BC027882 X17668 AY221100 CU693308 JF772862	-52596	+	X99374 CU687896 CU689996 DQ891615 DQ894807 AJ133005 U52370 BC034957 BC064547 AK301734 U38805 NM_001464	-128240	-	BC021672 NM_020130 BC020623 TSC_hg19_v1_chr8_+_40011000 AF268037 AK026240 EU832636 EU832712	187038	+	BC019598 TSC_hg19_v1_chr8_-_40755346 AK023904 NM_001135731 NM_024645	931357	-	TSC_hg19_v1_chr8_-_41166991 BC004466 AF017987 AF001900 AF056087 AK293090 BC036503 NM_003012	1343050	-	AK128691|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_194294|IDO2|169355|indoleamine 2,3-dioxygenase 2##NM_002164|IDO1|3620|indoleamine 2,3-dioxygenase 1##AK313259|IDO1|3620|indoleamine 2,3-dioxygenase 1##BC027882|IDO1|3620|indoleamine 2,3-dioxygenase 1##X17668|IDO1|3620|indoleamine 2,3-dioxygenase 1##AY221100|IDO1|3620|indoleamine 2,3-dioxygenase 1##JF772862|IDO1|3620|indoleamine 2,3-dioxygenase 1##X99374|ADAM2|2515|ADAM metallopeptidase domain 2##DQ891615|ADAM2|2515|ADAM metallopeptidase domain 2##DQ894807|ADAM2|2515|ADAM metallopeptidase domain 2##AJ133005|ADAM2|2515|ADAM metallopeptidase domain 2##U52370|ADAM2|2515|ADAM metallopeptidase domain 2##BC034957|ADAM2|2515|ADAM metallopeptidase domain 2##BC064547|ADAM2|2515|ADAM metallopeptidase domain 2##AK301734|ADAM2|2515|ADAM metallopeptidase domain 2##U38805|ADAM2|2515|ADAM metallopeptidase domain 2##NM_001464|ADAM2|2515|ADAM metallopeptidase domain 2##BC021672|C8orf4|56892|chromosome 8 open reading frame 4##NM_020130|C8orf4|56892|chromosome 8 open reading frame 4##BC020623|C8orf4|56892|chromosome 8 open reading frame 4##AF268037|C8orf4|56892|chromosome 8 open reading frame 4##AK026240|C8orf4|56892|chromosome 8 open reading frame 4##EU832636|C8orf4|56892|chromosome 8 open reading frame 4##EU832712|C8orf4|56892|chromosome 8 open reading frame 4##BC019598|ZMAT4|79698|zinc finger, matrin-type 4##AK023904|ZMAT4|79698|zinc finger, matrin-type 4##NM_001135731|ZMAT4|79698|zinc finger, matrin-type 4##NM_024645|ZMAT4|79698|zinc finger, matrin-type 4##BC004466|SFRP1|6422|secreted frizzled-related protein 1##AF017987|SFRP1|6422|secreted frizzled-related protein 1##AF001900|SFRP1|6422|secreted frizzled-related protein 1##AF056087|SFRP1|6422|secreted frizzled-related protein 1##AK293090|SFRP1|6422|secreted frizzled-related protein 1##BC036503|SFRP1|6422|secreted frizzled-related protein 1##NM_003012|SFRP1|6422|secreted frizzled-related protein 1	0.0	
chr9	104329694	104329799	reg1045632.p1	3.667	+	TSC_hg19_v1_chr9_+_104296175 AK314401	-33576	+	TSC_hg19_v1_chr9_+_104296143 BC016691 BC063115	-33599	+	TSC_hg19_v1_chr9_+_104296134 AF265230 NM_019592 AK022532 BC110584 BC110585 BC152309	-33616	+	AF085237 AF145026 BC066299 AK057524 AK302547 AF400667 BC030595 NM_147180 AK310471	27506	-	TSC_hg19_v1_chr9_-_104500218 AB385519 AF416558 AJ416950	170499	-	AB075853 BC167432 NM_133445 TSC_hg19_v1_chr9_-_104500930	171155	-	AK314401|RNF20|56254|ring finger protein 20##BC016691|RNF20|56254|ring finger protein 20##BC063115|RNF20|56254|ring finger protein 20##AF265230|RNF20|56254|ring finger protein 20##NM_019592|RNF20|56254|ring finger protein 20##AK022532|RNF20|56254|ring finger protein 20##BC110584|RNF20|56254|ring finger protein 20##BC110585|RNF20|56254|ring finger protein 20##BC152309|RNF20|56254|ring finger protein 20##AF085237|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF145026|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC066299|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AK057524|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF400667|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##BC030595|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##NM_147180|PPP3R2|5535|protein phosphatase 3, regulatory subunit B, beta##AF416558|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AJ416950|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##AB075853|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##BC167432|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A##NM_133445|GRIN3A|116443|glutamate receptor, ionotropic, N-methyl-D-aspartate 3A	0.992289	CTCF.p2:-7:0.992
chrX	21857524	21857641	reg1023884.p1	3.667	+	BC005948 AF129505 AJ250584 NM_014332 AK312134	-81365	-	BC109031 AK092279 AX747450 NM_153270	-181151	-	TSC_hg19_v1_chrX_+_21392535 NM_001168647 NM_001168648 NM_001168649 NM_014927 AB020709 AK294728	-465074	+	NM_015884 TSC_hg19_v1_chrX_+_21857734	117	+	TSC_hg19_v1_chrX_+_21857746 AK292933 AF019612 BC036465	177	+	TSC_hg19_v1_chrX_+_21857776 BC012905	194	+	BC005948|SMPX|23676|small muscle protein, X-linked##AF129505|SMPX|23676|small muscle protein, X-linked##AJ250584|SMPX|23676|small muscle protein, X-linked##NM_014332|SMPX|23676|small muscle protein, X-linked##AK312134|SMPX|23676|small muscle protein, X-linked##BC109031|KLHL34|257240|kelch-like 34 (Drosophila)##AK092279|KLHL34|257240|kelch-like 34 (Drosophila)##NM_153270|KLHL34|257240|kelch-like 34 (Drosophila)##NM_001168647|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168648|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_001168649|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_014927|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AB020709|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##AK294728|CNKSR2|22866|connector enhancer of kinase suppressor of Ras 2##NM_015884|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2##AK292933|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2##AF019612|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2##BC036465|MBTPS2|51360|membrane-bound transcription factor peptidase, site 2	0.0	
chr1	198041477	198041569	reg1039158.p1	3.666	+	TSC_hg19_v1_chr1_+_197886502 AY273889 NM_020204	-155016	+	AJ296272 NM_001014434 AJ277915	-159884	+	BC130608 BC130634 NM_001024594 HQ258066 BC038214	-169792	+	TSC_hg19_v1_chr1_+_198126162 NM_133494 AK313411	84531	+	NM_133262 NM_133326	468551	-	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	566650	+	AY273889|LHX9|56956|LIM homeobox 9##NM_020204|LHX9|56956|LIM homeobox 9##AJ296272|LHX9|56956|LIM homeobox 9##NM_001014434|LHX9|56956|LIM homeobox 9##AJ277915|LHX9|56956|LIM homeobox 9##BC130608|C1orf53|388722|chromosome 1 open reading frame 53##BC130634|C1orf53|388722|chromosome 1 open reading frame 53##NM_001024594|C1orf53|388722|chromosome 1 open reading frame 53##HQ258066|C1orf53|388722|chromosome 1 open reading frame 53##BC038214|C1orf53|388722|chromosome 1 open reading frame 53##NM_133494|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##AK313411|NEK7|140609|NIMA (never in mitosis gene a)-related kinase 7##NM_133262|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_133326|ATP6V1G3|127124|ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C	0.688907	CTCF.p2:-2:0.689
chr12	130049674	130049762	reg1033783.p1	3.666	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	-711631	+	BC043528 TSC_hg19_v1_chr12_+_129337985	-711734	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	-741275	-	BC114626 BC114936 NM_133448 AB061814	338493	-	AK056047 TSC_hg19_v1_chr12_-_130646911	597138	-	TSC_hg19_v1_chr12_+_130647008 BC070037 NM_007197	597292	+	AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC114626|TMEM132D|121256|transmembrane protein 132D##BC114936|TMEM132D|121256|transmembrane protein 132D##NM_133448|TMEM132D|121256|transmembrane protein 132D##AB061814|TMEM132D|121256|transmembrane protein 132D##AK056047|FLJ31485|440119|uncharacterized LOC440119##BC070037|FZD10|11211|frizzled family receptor 10##NM_007197|FZD10|11211|frizzled family receptor 10	0.0	
chr13	47253727	47253907	reg1019573.p1	3.666	+	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-126310	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-126397	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	-126494	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	117498	-	AK314132 BX647777 AK302787 NM_000621 NM_001165947	217250	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1321634	-	HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.0	
chr13	53313067	53313172	reg1035905.p1	3.666	+	NM_001130912 NM_006704 TSC_hg19_v1_chr13_+_53227044 AJ344097 AK292128 AY321358 AK302363 AY271314 BC000911 AK291402 AB528309 AF132856 BT009798 DQ890945 DQ894108	-86177	+	TSC_hg19_v1_chr13_+_53216565 BC108266	-96554	+	TSC_hg19_v1_chr13_+_53191659 NM_001011724 NM_001011725 BC007108 AK123159 BC082242	-121482	+	AB006000 CR541910 TSC_hg19_v1_chr13_-_53313891	745	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	843	-	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	109656	-	NM_001130912|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##NM_006704|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AJ344097|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK292128|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY321358|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK302363|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AY271314|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC000911|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AK291402|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##AF132856|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BT009798|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ890945|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##DQ894108|SUGT1|10910|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)##BC108266|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001011724|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##NM_001011725|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##AK123159|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##BC082242|HNRNPA1L2|144983|heterogeneous nuclear ribonucleoprotein A1-like 2##AB006000|LECT1|11061|leukocyte cell derived chemotaxin 1##CR541910|LECT1|11061|leukocyte cell derived chemotaxin 1##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8	0.132957	
chr13	88721363	88721471	reg1037989.p1	3.666	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-396548	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-2347978	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-4264917	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	3329487	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	5158010	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	6410409	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.941766	CTCF.p2:10:0.942
chr14	88929789	88929889	reg1038971.p2	3.666	+	AK055864 TSC_hg19_v1_chr14_+_88852071 AB463283 AM393238 CR533563	-77726	+	NM_001040428 NM_018418 TSC_hg19_v1_chr14_+_88852033 AF144487 AL136604 AK225746 AK290631 AK293007 CR936777	-77825	+	AF279890 NM_021161	-136587	-	TSC_hg19_v1_chr14_-_89016807 BC143846 BC143847	87000	-	TSC_hg19_v1_chr14_-_89017858 AK310480	88001	-	TSC_hg19_v1_chr14_-_89021360 NM_007039 X79510	91354	-	AK055864|SPATA7|55812|spermatogenesis associated 7##AM393238|SPATA7|55812|spermatogenesis associated 7##CR533563|SPATA7|55812|spermatogenesis associated 7##NM_001040428|SPATA7|55812|spermatogenesis associated 7##NM_018418|SPATA7|55812|spermatogenesis associated 7##AF144487|SPATA7|55812|spermatogenesis associated 7##AL136604|SPATA7|55812|spermatogenesis associated 7##AK225746|SPATA7|55812|spermatogenesis associated 7##AK290631|SPATA7|55812|spermatogenesis associated 7##AK293007|SPATA7|55812|spermatogenesis associated 7##CR936777|SPATA7|55812|spermatogenesis associated 7##AF279890|KCNK10|54207|potassium channel, subfamily K, member 10##NM_021161|KCNK10|54207|potassium channel, subfamily K, member 10##BC143846|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21##BC143847|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21##AK310480|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21##NM_007039|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21##X79510|PTPN21|11099|protein tyrosine phosphatase, non-receptor type 21	0.810865	CTCF.p2:-8:0.811
chr19	1671824	1671992	reg1001769.p1	3.666	+	M31222 NM_003200 TSC_hg19_v1_chr19_-_1652346	-19569	-	AB385055 BC110579 BC110580 M31523 NM_001136139	-21643	-	TSC_hg19_v1_chr19_-_1605464 NM_006830	-66435	-	NM_001080488 TSC_hg19_v1_chr19_+_1753823	81844	+	TSC_hg19_v1_chr19_+_1776120 AK074606	104279	+	AY302538 NM_001178002 TSC_hg19_v1_chr19_-_1812276 BC035162 NM_138813 AK125225 AK125969	140329	-	M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##BC110580|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##M31523|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_001136139|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_006830|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##NM_001080488|ONECUT3|390874|one cut homeobox 3##AY302538|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001178002|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##BC035162|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_138813|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125225|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125969|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3	0.016098	
chr5	169098293	169098473	reg1030333.p2	3.666	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-34083	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-34139	+	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	-87662	+	AK055998 NM_001129891	309360	-	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	434588	+	BC030767 NM_001102609 BC092511	561613	+	D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58	0.0	
chr7	142193472	142193561	reg1032556.p1	3.666	+	AY358487 BC035384 AK122940 NM_001001317	-235655	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-381977	+	AF016833 NM_004668 BC120872	-497824	+	NM_001190487	180614	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	263810	+	M12426 TSC_hg19_v1_chr7_+_142495248	301679	+	AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	0.995137	CTCF.p2:6:0.995
chr8	101514648	101514828	reg1021962.p1	3.666	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-192453	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-192557	-	AB271913 AB271914 AB029316 NM_015435	-199267	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	57202	-	AK093906 AX748361 NM_152628	147154	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	219068	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr8	28047466	28047585	reg1038746.p2	3.666	+	NM_018091 TSC_hg19_v1_chr8_+_27950679 AK302140 AK296475 AK022626 AK295574 AK001284 AK293424 AK315985 AK316053 AK298265 BC001240 AL834273 AB463602 AM392633	-96868	+	AB075870 NM_001010906	-106138	-	NM_173833	-197157	-	NM_006228 U48263 TSC_hg19_v1_chr8_+_28174784 AK289633 AY335948 BC034758	127200	+	BC001237 TSC_hg19_v1_chr8_-_28243694	196117	-	AK002050 AK023418 NM_018660 AB057659 AB073627	196436	-	NM_018091|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK302140|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK296475|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK022626|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK295574|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK001284|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK293424|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK315985|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK316053|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AK298265|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##BC001240|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AL834273|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AM392633|ELP3|55140|elongation protein 3 homolog (S. cerevisiae)##AB075870|C8orf80|389643|chromosome 8 open reading frame 80##NM_001010906|C8orf80|389643|chromosome 8 open reading frame 80##NM_173833|SCARA5|286133|scavenger receptor class A, member 5 (putative)##NM_006228|PNOC|5368|prepronociceptin##U48263|PNOC|5368|prepronociceptin##AK289633|PNOC|5368|prepronociceptin##AY335948|PNOC|5368|prepronociceptin##BC034758|PNOC|5368|prepronociceptin##BC001237|ZNF395|55893|zinc finger protein 395##AK002050|ZNF395|55893|zinc finger protein 395##AK023418|ZNF395|55893|zinc finger protein 395##NM_018660|ZNF395|55893|zinc finger protein 395##AB057659|ZNF395|55893|zinc finger protein 395##AB073627|ZNF395|55893|zinc finger protein 395	0.0	
chr9	108400205	108400305	reg1029485.p1	3.666	+	TSC_hg19_v1_chr9_+_108320420 NM_001079802 NM_001198963 NM_006731 AK300840 AK304460 BC058842 AB008226 AB609007	-79832	+	AK309817 TSC_hg19_v1_chr9_+_108210342 NM_001145313 NM_031919 NM_207647 AF088031 AK299350 AK296433 AK299491 AF316830	-189992	+	TSC_hg19_v1_chr9_+_108006993 AJ420812 BC049203 AB528737	-393188	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	24502	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	56598	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	56663	+	NM_001079802|FKTN|2218|fukutin##NM_001198963|FKTN|2218|fukutin##NM_006731|FKTN|2218|fukutin##AK300840|FKTN|2218|fukutin##AK304460|FKTN|2218|fukutin##BC058842|FKTN|2218|fukutin##AB008226|FKTN|2218|fukutin##AK309817|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_001145313|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_031919|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##NM_207647|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF088031|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299350|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK296433|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AK299491|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AF316830|FSD1L|83856|fibronectin type III and SPRY domain containing 1-like##AJ420812|SLC44A1|23446|solute carrier family 44, member 1##BC049203|SLC44A1|23446|solute carrier family 44, member 1##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B	0.815222	CTCF.p2:-1:0.815
chr10	103949261	103949403	reg1038036.p2	3.665	+	NM_004741 TSC_hg19_v1_chr10_+_103912145 Z34289 AK225101 AK314363 AK056755 BC001883 BC006769 DQ891862 DQ895051 AY820769 D21262	-37281	+	AF325193 NM_015062 TSC_hg19_v1_chr10_+_103892796 AK299885 BC063806 AB011167 BC063829 AK095248 AB384505	-56527	+	TSC_hg19_v1_chr10_-_103879963 NM_001113407	-69189	-	BC034344 NM_152310	36810	+	BC011642 NM_005029	51897	-	NM_001199378 NM_001199379 NM_004193 BC057804 BC068543 TSC_hg19_v1_chr10_+_104005288 BC094763 AK025330 BC032543	55947	+	NM_004741|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##Z34289|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK225101|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK314363|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AK056755|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC001883|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##BC006769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##DQ891862|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##DQ895051|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AY820769|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##D21262|NOLC1|9221|nucleolar and coiled-body phosphoprotein 1##AF325193|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##NM_015062|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AK299885|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC063806|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AB011167|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##BC063829|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##AK095248|PPRC1|23082|peroxisome proliferator-activated receptor gamma, coactivator-related 1##NM_001113407|LDB1|8861|LIM domain binding 1##BC034344|ELOVL3|83401|ELOVL fatty acid elongase 3##NM_152310|ELOVL3|83401|ELOVL fatty acid elongase 3##BC011642|PITX3|5309|paired-like homeodomain 3##NM_005029|PITX3|5309|paired-like homeodomain 3##NM_001199378|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199379|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1	0.0	
chr1	110359180	110359282	reg1033047.p1	3.665	+	AY074930 TSC_hg19_v1_chr1_-_110306546 AK307932 AK310979 AK308196 AK025175 AK225235 BC012926 AK292198 AK290261 NM_024526 NM_133181 NM_139053	-52647	-	BC008790 NM_000849	-75572	-	BT019945 CR542108 AB527634 DQ891834 EU176637 BC000088 EF363096 J05459 AB209816 AK313444 TSC_hg19_v1_chr1_-_110282939 AK304300	-76303	-	NM_000757 NM_172210 NM_172212	94001	+	BC021117 TSC_hg19_v1_chr1_+_110453470 AK291660 M37435 M27087 U22386 AB527768 M64592	94319	+	AF315687 TSC_hg19_v1_chr1_+_110527316	168080	+	AY074930|EPS8L3|79574|EPS8-like 3##AK307932|EPS8L3|79574|EPS8-like 3##AK310979|EPS8L3|79574|EPS8-like 3##AK308196|EPS8L3|79574|EPS8-like 3##AK025175|EPS8L3|79574|EPS8-like 3##AK225235|EPS8L3|79574|EPS8-like 3##BC012926|EPS8L3|79574|EPS8-like 3##AK292198|EPS8L3|79574|EPS8-like 3##AK290261|EPS8L3|79574|EPS8-like 3##NM_024526|EPS8L3|79574|EPS8-like 3##NM_133181|EPS8L3|79574|EPS8-like 3##NM_139053|EPS8L3|79574|EPS8-like 3##BC008790|GSTM3|2947|glutathione S-transferase mu 3 (brain)##NM_000849|GSTM3|2947|glutathione S-transferase mu 3 (brain)##BT019945|GSTM3|2947|glutathione S-transferase mu 3 (brain)##CR542108|GSTM3|2947|glutathione S-transferase mu 3 (brain)##DQ891834|GSTM3|2947|glutathione S-transferase mu 3 (brain)##EU176637|GSTM3|2947|glutathione S-transferase mu 3 (brain)##BC000088|GSTM3|2947|glutathione S-transferase mu 3 (brain)##EF363096|GSTM3|2947|glutathione S-transferase mu 3 (brain)##J05459|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AB209816|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AK313444|GSTM3|2947|glutathione S-transferase mu 3 (brain)##AK304300|GSTM3|2947|glutathione S-transferase mu 3 (brain)##NM_000757|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172210|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172212|CSF1|1435|colony stimulating factor 1 (macrophage)##BC021117|CSF1|1435|colony stimulating factor 1 (macrophage)##AK291660|CSF1|1435|colony stimulating factor 1 (macrophage)##M37435|CSF1|1435|colony stimulating factor 1 (macrophage)##M27087|CSF1|1435|colony stimulating factor 1 (macrophage)##U22386|CSF1|1435|colony stimulating factor 1 (macrophage)##M64592|CSF1|1435|colony stimulating factor 1 (macrophage)##AF315687|AHCYL1|10768|adenosylhomocysteinase-like 1	0.0	
chr11	65245002	65245122	reg1037494.p1	3.665	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	-51539	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	-52662	+	TSC_hg19_v1_chr11_+_65190274 AK026198	-54784	+	TSC_hg19_v1_chr11_+_65265158 EF177381	20141	+	TSC_hg19_v1_chr11_+_65266515 BC025986 BX538238 FJ209305	21439	+	TSC_hg19_v1_chr11_+_65266869 BC104662	21737	+	AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##EF177381|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BC025986|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BX538238|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)	0.0	
chr12	6536333	6536416	reg1031675.p2	3.665	+	TSC_hg19_v1_chr12_+_6493333 AK095418 BC026262 AK027080 L04270 NM_002342 AB527559 DQ891995 DQ895185 CU693188	-43002	+	AK304379 NM_001159575	-49852	-	NM_001038	-51470	-	AK315732 NM_001242 BC012160 M63928 DQ892296 EU176659 AB590221 CU680244	17772	+	NM_018009 TSC_hg19_v1_chr12_+_6561272 BC015017 AK223163 AK001005 AK002056 AK222956 AK098035 HQ258015	24920	+	TSC_hg19_v1_chr12_-_6579844 AF060538 BC023286 AK289498 AK296294 AK303137 AK309184 NM_014231 NM_016830 NM_199245	43440	-	AK095418|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##BC026262|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK027080|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##L04270|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##NM_002342|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ891995|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##DQ895185|LTBR|4055|lymphotoxin beta receptor (TNFR superfamily, member 3)##AK304379|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001159575|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##NM_001038|SCNN1A|6337|sodium channel, nonvoltage-gated 1 alpha##AK315732|CD27|939|CD27 molecule##NM_001242|CD27|939|CD27 molecule##BC012160|CD27|939|CD27 molecule##M63928|CD27|939|CD27 molecule##DQ892296|CD27|939|CD27 molecule##EU176659|CD27|939|CD27 molecule##NM_018009|TAPBPL|55080|TAP binding protein-like##BC015017|TAPBPL|55080|TAP binding protein-like##AK223163|TAPBPL|55080|TAP binding protein-like##AK001005|TAPBPL|55080|TAP binding protein-like##AK002056|TAPBPL|55080|TAP binding protein-like##AK222956|TAPBPL|55080|TAP binding protein-like##AK098035|TAPBPL|55080|TAP binding protein-like##HQ258015|TAPBPL|55080|TAP binding protein-like##AF060538|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##BC023286|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK289498|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK296294|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK303137|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##AK309184|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_014231|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_016830|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)##NM_199245|VAMP1|6843|vesicle-associated membrane protein 1 (synaptobrevin 1)	0.0	
chr13	52733799	52733884	reg1035052.p1	3.665	+	NM_152720 TSC_hg19_v1_chr13_-_52733672 BC019916 AK290259	-115	-	BC063885 NM_199289	-30628	-	BC073862 D87455 NM_021645	-135089	+	NM_001146099 NM_002498	154	-	TSC_hg19_v1_chr13_-_52768573 AK307345 AK307124 AK309380 BX648914 AK027536	34718	-	AB044385 TSC_hg19_v1_chr13_-_52980275 BC063842 AK298974 AK315087 AY358149	246437	-	NM_152720|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##BC019916|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##AK290259|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##BC063885|NEK5|341676|NIMA (never in mitosis gene a)-related kinase 5##NM_199289|NEK5|341676|NIMA (never in mitosis gene a)-related kinase 5##BC073862|ALG11|440138|asparagine-linked glycosylation 11, alpha-1,2-mannosyltransferase homolog (yeast)##D87455|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)##NM_021645|UTP14C|9724|UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)##NM_001146099|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##NM_002498|NEK3|4752|NIMA (never in mitosis gene a)-related kinase 3##AK307345|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK307124|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK309380|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##BX648914|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AK027536|THSD1P1|374500|thrombospondin, type I, domain containing 1 pseudogene 1##AB044385|THSD1|55901|thrombospondin, type I, domain containing 1##BC063842|THSD1|55901|thrombospondin, type I, domain containing 1##AK298974|THSD1|55901|thrombospondin, type I, domain containing 1##AK315087|THSD1|55901|thrombospondin, type I, domain containing 1##AY358149|THSD1|55901|thrombospondin, type I, domain containing 1	0.0	
chr1	57045175	57045306	reg1023092.p1	3.665	+	AK312439 TSC_hg19_v1_chr1_-_57045216	-23	-	AF017786 U79294 AF480883 TSC_hg19_v1_chr1_-_57045132	-110	-	AF043329 TSC_hg19_v1_chr1_-_57045054 BC009196	-221	-	TSC_hg19_v1_chr1_-_57045237 NM_003713	5	-	TSC_hg19_v1_chr1_+_57110986 AK314011 NM_006252 U06454 BC069680 BC069740 BC069823 EF056019	65662	+	AK125198 NM_001004303 TSC_hg19_v1_chr1_-_57285379	240133	-	AK312439|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF017786|PPAP2B|8613|phosphatidic acid phosphatase type 2B##U79294|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF480883|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AF043329|PPAP2B|8613|phosphatidic acid phosphatase type 2B##BC009196|PPAP2B|8613|phosphatidic acid phosphatase type 2B##NM_003713|PPAP2B|8613|phosphatidic acid phosphatase type 2B##AK314011|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##NM_006252|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##U06454|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069680|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069740|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##BC069823|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##EF056019|PRKAA2|5563|protein kinase, AMP-activated, alpha 2 catalytic subunit##AK125198|C1orf168|199920|chromosome 1 open reading frame 168##NM_001004303|C1orf168|199920|chromosome 1 open reading frame 168	0.01125	
chr15	75992964	75993076	reg1034013.p2	3.665	+	BC018775 NM_153271 AL833039 EF219141 DQ891695 DQ895211 EU831407 EU831499	-51626	+	AB463774 AM393583 CU675427 CU680036 TSC_hg19_v1_chr15_-_75932566 BC020557 BC011745 AY050497 AL136913 BC006487 AK001830 AK223121 NM_018285	-60434	-	NM_001042588	-74302	-	AB462981 AY359468 X96753 TSC_hg19_v1_chr15_-_76005157	12108	-	TSC_hg19_v1_chr15_-_76005190 NM_001897	12175	-	TSC_hg19_v1_chr15_+_76016306 BC039862 NM_175881	23294	+	BC018775|SNX33|257364|sorting nexin 33##NM_153271|SNX33|257364|sorting nexin 33##AL833039|SNX33|257364|sorting nexin 33##EF219141|SNX33|257364|sorting nexin 33##DQ891695|SNX33|257364|sorting nexin 33##DQ895211|SNX33|257364|sorting nexin 33##EU831407|SNX33|257364|sorting nexin 33##EU831499|SNX33|257364|sorting nexin 33##AM393583|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC020557|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC011745|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AY050497|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AL136913|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##BC006487|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK001830|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK223121|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_018285|IMP3|55272|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_001042588|SNUPN|10073|snurportin 1##AY359468|CSPG4|1464|chondroitin sulfate proteoglycan 4##X96753|CSPG4|1464|chondroitin sulfate proteoglycan 4##NM_001897|CSPG4|1464|chondroitin sulfate proteoglycan 4##BC039862|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1##NM_175881|ODF3L1|161753|outer dense fiber of sperm tails 3-like 1	0.375627	CTCF.p2:-66:0.376
chr16	12070067	12070133	reg1038111.p1	3.665	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-11016	+	NM_001130007	-59582	-	TSC_hg19_v1_chr16_-_12009919 AK315267	-60172	-	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	473	+	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	827551	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	827619	-	NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AK315267|GSPT1|2935|G1 to S phase transition 1##AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1	0.0	
chr19	53426386	53426548	reg1036279.p1	3.665	+	BC105738 TSC_hg19_v1_chr19_-_53400887 AK307375	-25566	-	NM_207333	-31869	-	TSC_hg19_v1_chr19_-_53360854 AX721127 CR936599 AK292449 CR936695 AK289841 AY442330 AY442331 NM_001008801 NM_199132	-65591	-	BC105739 BC105740 BC105930 AK316503 AK291990 BC063805 TSC_hg19_v1_chr19_-_53466117 CR749224 NM_001031665 NM_001202456 NM_001202457 NM_001202473	39624	-	NM_152473	90876	+	NM_001191055	121523	+	BC105738|ZNF320|162967|zinc finger protein 320##NM_207333|ZNF320|162967|zinc finger protein 320##CR936599|ZNF468|90333|zinc finger protein 468##AK292449|ZNF468|90333|zinc finger protein 468##CR936695|ZNF468|90333|zinc finger protein 468##AK289841|ZNF468|90333|zinc finger protein 468##AY442330|ZNF468|90333|zinc finger protein 468##AY442331|ZNF468|90333|zinc finger protein 468##NM_001008801|ZNF468|90333|zinc finger protein 468##NM_199132|ZNF468|90333|zinc finger protein 468##BC105739|ZNF816|125893|zinc finger protein 816##BC105740|ZNF816|125893|zinc finger protein 816##BC105930|ZNF816|125893|zinc finger protein 816##AK316503|ZNF816-ZNF321P|100529240|ZNF816-ZNF321P readthrough##AK291990|ZNF816|125893|zinc finger protein 816##BC063805|ZNF816|125893|zinc finger protein 816##CR749224|ZNF816-ZNF321P|100529240|ZNF816-ZNF321P readthrough##NM_001031665|ZNF816|125893|zinc finger protein 816##NM_001202456|ZNF816|125893|zinc finger protein 816##NM_001202457|ZNF816|125893|zinc finger protein 816##NM_001202473|ZNF816-ZNF321P|100529240|ZNF816-ZNF321P readthrough##NM_152473|ERVV-1|147664|endogenous retrovirus group V, member 1##NM_001191055|ERVV-2|100271846|endogenous retrovirus group V, member 2	0.0	
chr7	72476212	72476393	reg1040700.p1	3.665	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-51060	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-79428	+	TSC_hg19_v1_chr7_+_72395623 AK123814 AB289621	-80677	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	92729	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	246522	-	AK057366 AY081948 AY081949 NM_178125	265782	-	BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##AK123814|POM121|9883|POM121 membrane glycoprotein##AB289621|POM121|9883|POM121 membrane glycoprotein##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50	0.0	
chr9	102821158	102821279	reg1042252.p1	3.665	+	TSC_hg19_v1_chr9_+_102677458 BC101564 BC101566 BC143430 BC039048	-143758	+	TSC_hg19_v1_chr9_+_102668954 BC111009 AK000658 BC070269 AK095262 AL833620	-152217	+	AK311412 TSC_hg19_v1_chr9_+_102668952	-152266	+	AB383909 AJ344330 TSC_hg19_v1_chr9_-_102861281 AB011145 AY359048 BX648519	39984	-	TSC_hg19_v1_chr9_-_102861295 BC005374	40075	-	TSC_hg19_v1_chr9_-_102861305 AK075024 NM_015051	40103	-	BC101564|STX17|55014|syntaxin 17##BC101566|STX17|55014|syntaxin 17##BC143430|STX17|55014|syntaxin 17##BC111009|STX17|55014|syntaxin 17##AK000658|STX17|55014|syntaxin 17##BC070269|STX17|55014|syntaxin 17##AK095262|STX17|55014|syntaxin 17##AL833620|STX17|55014|syntaxin 17##AK311412|STX17|55014|syntaxin 17##AJ344330|ERP44|23071|endoplasmic reticulum protein 44##AB011145|ERP44|23071|endoplasmic reticulum protein 44##AY359048|ERP44|23071|endoplasmic reticulum protein 44##BX648519|ERP44|23071|endoplasmic reticulum protein 44##BC005374|ERP44|23071|endoplasmic reticulum protein 44##AK075024|ERP44|23071|endoplasmic reticulum protein 44##NM_015051|ERP44|23071|endoplasmic reticulum protein 44	0.0	
chr9	128209220	128209399	reg1035018.p2	3.665	+	TSC_hg19_v1_chr9_+_128024122 AK056493 NM_015635 AB040954 BC114937 BC114962	-185160	+	TSC_hg19_v1_chr9_+_128024104 BC110990	-185205	+	TSC_hg19_v1_chr9_+_128024097 AK296381	-185211	+	TSC_hg19_v1_chr9_-_128469297 M37191	260001	-	TSC_hg19_v1_chr9_-_128469466 AK290060	260158	-	AL833042 TSC_hg19_v1_chr9_-_128469485 AY633624 AY633625 AY633626 BC002326 BC003044	260170	-	AK056493|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##NM_015635|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AB040954|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114937|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC114962|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##BC110990|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##AK296381|GAPVD1|26130|GTPase activating protein and VPS9 domains 1##M37191|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AK290060|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AL833042|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633624|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633625|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##AY633626|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC002326|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1##BC003044|MAPKAP1|79109|mitogen-activated protein kinase associated protein 1	0.0	
chr10	126092356	126092434	reg1010032.p2	3.664	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	-239242	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-240496	-	BC137492 BC146862 AY358565 NM_198148	-440899	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	15078	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	15123	-	NM_001146340 TSC_hg19_v1_chr10_-_126138606	46182	-	BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##NM_001146340|NKX1-2|390010|NK1 homeobox 2	0.0	
chr12	76414907	76414973	reg1033088.p2	3.664	+	BC005225 TSC_hg19_v1_chr12_-_75905414 NM_007043	-509521	-	BC033887 TSC_hg19_v1_chr12_-_75905393 BC014034 BC026107	-509545	-	AK022133 TSC_hg19_v1_chr12_-_75905382 BC016778 U55766	-509555	-	AF220656 TSC_hg19_v1_chr12_-_76424608	9607	-	TSC_hg19_v1_chr12_-_76425369 BC126425 BC130427 BC110820 U92983 BC018929	10350	-	TSC_hg19_v1_chr12_-_76425376 AK304224 AB587598 NM_007350 Z50194	10587	-	BC005225|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##NM_007043|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC033887|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC014034|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC026107|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK022133|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC016778|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##U55766|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AF220656|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC126425|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC130427|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC110820|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##U92983|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##BC018929|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##AK304224|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##NM_007350|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1##Z50194|PHLDA1|22822|pleckstrin homology-like domain, family A, member 1	0.0	
chr14	90107968	90108098	reg1037456.p1	3.664	+	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	-22438	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	-224623	-	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-229257	-	BC001787 BX247991 AK298930 AK094740 NM_145231	313027	-	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	314213	+	TSC_hg19_v1_chr14_+_90422278 AK001952 BC015474 AK315549 BX161451	314246	+	AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK001952|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC015474|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK315549|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BX161451|TDP1|55775|tyrosyl-DNA phosphodiesterase 1	0.0	
chr15	62352750	62352859	reg1029879.p1	3.664	+	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	-190	-	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	-831307	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	-831380	-	NM_207322 AF504646	6384	+	NM_001007595	104677	-	TSC_hg19_v1_chr15_+_62682748 AB621808	329914	+	AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B##AB621808|TLN2|83660|talin 2	0.067032	
chr17	17991166	17991298	reg1031842.p1	3.664	+	TSC_hg19_v1_chr17_+_17942750 BC041829 NM_024052 AK315083 AK074284 AK127580 BC000636	-48425	+	AM393241 CU678578 CU689282 AB528073 AF070584 BC032126 AF052185 AY203943 TSC_hg19_v1_chr17_-_17942481 BC004114 NM_145691 AK290257 AK294487 AK296382	-48829	-	NM_001130090 NM_001130091 NM_001130092 NM_031294 TSC_hg19_v1_chr17_+_17876186 BC047873 AL136926 AK293011 BC040276 BC050419 BC050665 AK093317 AX748051	-115032	+	TSC_hg19_v1_chr17_+_17991289 AK313362 BC062572 BC000493 NM_001388 AK297569 X80754 AK295575 DQ890768 DQ893929 BT006976	36	+	AF144094 NM_016239	20787	+	TSC_hg19_v1_chr17_+_18086815 NM_017758	95607	+	BC041829|C17orf39|79018|chromosome 17 open reading frame 39##NM_024052|C17orf39|79018|chromosome 17 open reading frame 39##AK315083|C17orf39|79018|chromosome 17 open reading frame 39##AK074284|C17orf39|79018|chromosome 17 open reading frame 39##AK127580|C17orf39|79018|chromosome 17 open reading frame 39##BC000636|C17orf39|79018|chromosome 17 open reading frame 39##AM393241|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF070584|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC032126|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF052185|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AY203943|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC004114|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_145691|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK290257|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK294487|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_001130090|LRRC48|83450|leucine rich repeat containing 48##NM_001130091|LRRC48|83450|leucine rich repeat containing 48##NM_001130092|LRRC48|83450|leucine rich repeat containing 48##NM_031294|LRRC48|83450|leucine rich repeat containing 48##BC047873|LRRC48|83450|leucine rich repeat containing 48##AL136926|LRRC48|83450|leucine rich repeat containing 48##AK293011|LRRC48|83450|leucine rich repeat containing 48##BC040276|LRRC48|83450|leucine rich repeat containing 48##BC050419|LRRC48|83450|leucine rich repeat containing 48##BC050665|LRRC48|83450|leucine rich repeat containing 48##AK093317|LRRC48|83450|leucine rich repeat containing 48##AK313362|DRG2|1819|developmentally regulated GTP binding protein 2##BC062572|DRG2|1819|developmentally regulated GTP binding protein 2##BC000493|DRG2|1819|developmentally regulated GTP binding protein 2##NM_001388|DRG2|1819|developmentally regulated GTP binding protein 2##AK297569|DRG2|1819|developmentally regulated GTP binding protein 2##X80754|DRG2|1819|developmentally regulated GTP binding protein 2##AK295575|DRG2|1819|developmentally regulated GTP binding protein 2##DQ890768|DRG2|1819|developmentally regulated GTP binding protein 2##DQ893929|DRG2|1819|developmentally regulated GTP binding protein 2##BT006976|DRG2|1819|developmentally regulated GTP binding protein 2##AF144094|MYO15A|51168|myosin XVA##NM_016239|MYO15A|51168|myosin XVA##NM_017758|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)	0.0	
chr2	65177621	65177710	reg1035956.p1	3.664	+	TSC_hg19_v1_chr2_-_65159574 BC037562	-18088	-	TSC_hg19_v1_chr2_-_65090764 AK097952	-86924	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-296618	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	37935	+	TSC_hg19_v1_chr2_+_65216485 AK298472 AK315986 NM_003038	38826	+	TSC_hg19_v1_chr2_+_65216532 AK223486 AK313052 BC072423 BC026216 L14595 L19444 AB026689 DQ891127 DQ894306	38985	+	BC037562|LOC400958|400958|uncharacterized LOC400958##D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK223486|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK313052|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC072423|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##BC026216|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L14595|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##L19444|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AB026689|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ891127|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##DQ894306|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.0	
chr3	153319434	153319505	reg1035293.p2	3.664	+	AF086445 NM_001101337	-117186	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-439421	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-439443	+	AK127282 NM_001251962	519322	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	519733	+	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	722791	-	AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36	0.0	
chr6	110938501	110938617	reg1036784.p2	3.664	+	TSC_hg19_v1_chr6_-_110797837 BC047565 NM_033125	-140696	-	TSC_hg19_v1_chr6_-_110797817 AK304546	-140741	-	BC012014 AF268892 AY145502 BC037247 TSC_hg19_v1_chr6_-_110797794	-140771	-	AK304351 TSC_hg19_v1_chr6_+_111135843	197274	+	BC047513 TSC_hg19_v1_chr6_-_111136246	197659	-	AJ420571 TSC_hg19_v1_chr6_-_111136300	197740	-	BC047565|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##NM_033125|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304546|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC012014|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AF268892|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AY145502|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC037247|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304351|AMD1|262|adenosylmethionine decarboxylase 1##BC047513|CDK19|23097|cyclin-dependent kinase 19##AJ420571|CDK19|23097|cyclin-dependent kinase 19	0.0	
chr6	158178063	158178215	reg1001973.p2	3.664	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-375600	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-432922	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-433555	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	66150	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	66235	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	224748	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.0	
chr6	16277668	16277807	reg1037563.p1	3.664	+	TSC_hg19_v1_chr6_+_16238819 BC008281 NM_006877 M24470 EU831974 EU832067 CU678899	-38886	+	TSC_hg19_v1_chr6_+_16143281 AK026739	-134427	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	-148300	+	BC039236 TSC_hg19_v1_chr6_-_16761692 BC014548 X79204 AK311274 AK311649 BC063120 BC047894 NM_000332 NM_001128164 BC011026	483960	-	NM_001190766	824751	+	AK095016 AK293052 AK315856 NM_001143942 AB528899 AY547318 AK129865	1004117	+	BC008281|GMPR|2766|guanosine monophosphate reductase##NM_006877|GMPR|2766|guanosine monophosphate reductase##M24470|GMPR|2766|guanosine monophosphate reductase##EU831974|GMPR|2766|guanosine monophosphate reductase##EU832067|GMPR|2766|guanosine monophosphate reductase##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##BC039236|ATXN1|6310|ataxin 1##BC014548|ATXN1|6310|ataxin 1##X79204|ATXN1|6310|ataxin 1##AK311274|ATXN1|6310|ataxin 1##BC063120|ATXN1|6310|ataxin 1##BC047894|ATXN1|6310|ataxin 1##NM_000332|ATXN1|6310|ataxin 1##NM_001128164|ATXN1|6310|ataxin 1##BC011026|ATXN1|6310|ataxin 1##NM_001190766|FLJ23152|401236|uncharacterized LOC401236##AK095016|RBM24|221662|RNA binding motif protein 24##AK293052|RBM24|221662|RNA binding motif protein 24##AK315856|RBM24|221662|RNA binding motif protein 24##NM_001143942|RBM24|221662|RNA binding motif protein 24##AY547318|RBM24|221662|RNA binding motif protein 24##AK129865|RBM24|221662|RNA binding motif protein 24	0.365867	CTCF.p2:-28:0.366
chr8	8402020	8402130	reg1030160.p2	3.664	+	AK122582 NM_001080826	-162853	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-226187	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-315933	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	157623	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	348863	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	458290	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.0	
chr9	101402800	101402912	reg1037209.p2	3.664	+	TSC_hg19_v1_chr9_-_101018013 NM_018421	-384852	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	-385135	-	TSC_hg19_v1_chr9_-_100954922 AK292788 BC011690 AB209809 NM_052820	-447923	-	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	68329	-	CR749467 TSC_hg19_v1_chr9_-_101558801 NM_173551	155795	-	TSC_hg19_v1_chr9_+_101569953 AB527376 AB040673 AB078146 AJ132365 NM_024642	167134	+	NM_018421|TBC1D2|55357|TBC1 domain family, member 2##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##AK292788|CORO2A|7464|coronin, actin binding protein, 2A##BC011690|CORO2A|7464|coronin, actin binding protein, 2A##AB209809|CORO2A|7464|coronin, actin binding protein, 2A##NM_052820|CORO2A|7464|coronin, actin binding protein, 2A##DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##CR749467|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##NM_173551|ANKS6|203286|ankyrin repeat and sterile alpha motif domain containing 6##AB040673|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AB078146|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##AJ132365|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)##NM_024642|GALNT12|79695|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 (GalNAc-T12)	0.052817	
chr9	104211463	104211567	reg1027438.p1	3.664	+	X01098 TSC_hg19_v1_chr9_-_104198057 AK026411 AK290795 BC029399 NM_000035 X02747	-13441	-	TSC_hg19_v1_chr9_+_104161232 AK290163 AK313655 AK308935 NM_003452 NM_197977 BC065718 BC092425 AF025770 U75454 U95992 BC126120 BC143876 BC143877	-50271	+	TSC_hg19_v1_chr9_-_104160901 BC032008 AK295521 AK000500 AK025643 NM_019051	-50618	-	TSC_hg19_v1_chr9_-_104249468 AK313981 BC006115 NM_032342	37932	-	TSC_hg19_v1_chr9_+_104296134 AF265230 NM_019592 AK022532 BC110584 BC110585 BC152309	84615	+	TSC_hg19_v1_chr9_+_104296143 BC016691 BC063115	84632	+	X01098|ALDOB|229|aldolase B, fructose-bisphosphate##AK026411|ALDOB|229|aldolase B, fructose-bisphosphate##AK290795|ALDOB|229|aldolase B, fructose-bisphosphate##BC029399|ALDOB|229|aldolase B, fructose-bisphosphate##NM_000035|ALDOB|229|aldolase B, fructose-bisphosphate##X02747|ALDOB|229|aldolase B, fructose-bisphosphate##AK290163|ZNF189|7743|zinc finger protein 189##AK313655|ZNF189|7743|zinc finger protein 189##AK308935|ZNF189|7743|zinc finger protein 189##NM_003452|ZNF189|7743|zinc finger protein 189##NM_197977|ZNF189|7743|zinc finger protein 189##BC065718|ZNF189|7743|zinc finger protein 189##BC092425|ZNF189|7743|zinc finger protein 189##AF025770|ZNF189|7743|zinc finger protein 189##U75454|ZNF189|7743|zinc finger protein 189##U95992|ZNF189|7743|zinc finger protein 189##BC126120|ZNF189|7743|zinc finger protein 189##BC143876|ZNF189|7743|zinc finger protein 189##BC143877|ZNF189|7743|zinc finger protein 189##BC032008|MRPL50|54534|mitochondrial ribosomal protein L50##AK000500|MRPL50|54534|mitochondrial ribosomal protein L50##NM_019051|MRPL50|54534|mitochondrial ribosomal protein L50##AK313981|C9orf125|84302|chromosome 9 open reading frame 125##BC006115|C9orf125|84302|chromosome 9 open reading frame 125##NM_032342|C9orf125|84302|chromosome 9 open reading frame 125##AF265230|RNF20|56254|ring finger protein 20##NM_019592|RNF20|56254|ring finger protein 20##AK022532|RNF20|56254|ring finger protein 20##BC110584|RNF20|56254|ring finger protein 20##BC110585|RNF20|56254|ring finger protein 20##BC152309|RNF20|56254|ring finger protein 20##BC016691|RNF20|56254|ring finger protein 20##BC063115|RNF20|56254|ring finger protein 20	0.067704	
chr9	25772440	25772553	reg1039313.p1	3.664	+	NM_001004125	-93641	-	BC017510 TSC_hg19_v1_chr9_-_25678278 BC046919 AY168647 BC110824	-94163	-	AB209294 NM_004432	-1946434	-	AK131322 NM_001004352	294176	+	AB590748 CU687198 BC071953 TSC_hg19_v1_chr9_-_26892779 AK023719 BC014658 NM_001167575 NM_024828	1120273	-	EU176453 EU176795 AB385043 TSC_hg19_v1_chr9_-_26947158 BC032551 AK022761	1174608	-	NM_001004125|TUSC1|286319|tumor suppressor candidate 1##BC017510|TUSC1|286319|tumor suppressor candidate 1##BC046919|TUSC1|286319|tumor suppressor candidate 1##AY168647|TUSC1|286319|tumor suppressor candidate 1##BC110824|TUSC1|286319|tumor suppressor candidate 1##AB209294|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##NM_004432|ELAVL2|1993|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)##AK131322|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004352|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##BC071953|C9orf82|79886|chromosome 9 open reading frame 82##AK023719|C9orf82|79886|chromosome 9 open reading frame 82##BC014658|C9orf82|79886|chromosome 9 open reading frame 82##NM_001167575|C9orf82|79886|chromosome 9 open reading frame 82##NM_024828|C9orf82|79886|chromosome 9 open reading frame 82##EU176453|PLAA|9373|phospholipase A2-activating protein##EU176795|PLAA|9373|phospholipase A2-activating protein##BC032551|PLAA|9373|phospholipase A2-activating protein##AK022761|PLAA|9373|phospholipase A2-activating protein	0.0	
chr11	32127667	32127805	reg1030726.p2	3.663	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	-15037	+	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	-15259	+	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	-288258	-	AK093168 BC032861 NM_001198551 NM_001198552	324624	-	TSC_hg19_v1_chr11_-_32456950 BC046461	329203	-	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	329333	-	BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1##BC046461|WT1|7490|Wilms tumor 1##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1	0.024195	
chr1	25359000	25359108	reg1035162.p2	3.663	+	BC013362 AK310945 NM_001031680 AF022726	-67512	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-102268	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-102315	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	199933	-	BC065040 TSC_hg19_v1_chr1_-_25573922	214869	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	214919	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr13	23733481	23733579	reg1033784.p1	3.663	+	TSC_hg19_v1_chr13_+_22245083 AK290792 NM_002010	-1488382	+	TSC_hg19_v1_chr13_-_22178356 NM_152726	-1555170	-	TSC_hg19_v1_chr13_-_22178300 CU689110 CU690000 AK091907 AX747248 BC031089 BC034965	-1555221	-	NM_000231 U34976 BC109321 AK290620 AK316579 BC074777 BC074778	21585	+	TSC_hg19_v1_chr13_-_23949652 AK125458	216120	-	TSC_hg19_v1_chr13_-_24007842 NM_014363	274310	-	AK290792|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_002010|FGF9|2254|fibroblast growth factor 9 (glia-activating factor)##NM_152726|EFHA1|221154|EF-hand domain family, member A1##AK091907|EFHA1|221154|EF-hand domain family, member A1##BC031089|EFHA1|221154|EF-hand domain family, member A1##BC034965|EFHA1|221154|EF-hand domain family, member A1##NM_000231|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##U34976|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC109321|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK290620|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK316579|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074777|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##BC074778|SGCG|6445|sarcoglycan, gamma (35kDa dystrophin-associated glycoprotein)##AK125458|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)	0.635317	CTCF.p2:13:0.635
chr15	55572209	55572375	reg1034142.p2	3.663	+	BC132800 BC136423 BC107680 NM_183236	-9194	-	AF125393 NM_183234 U57094 U38654 NM_004580	-9755	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	-83113	-	TSC_hg19_v1_chr15_-_55582012 AK312836 NM_183235	9699	-	NM_004855 AK293666 AK314706 BC017711	38871	+	TSC_hg19_v1_chr15_-_55611322 AB593170	39048	-	BC132800|RAB27A|5873|RAB27A, member RAS oncogene family##BC136423|RAB27A|5873|RAB27A, member RAS oncogene family##BC107680|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183236|RAB27A|5873|RAB27A, member RAS oncogene family##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1##AK312836|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183235|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004855|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK293666|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##AK314706|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B##BC017711|PIGB|9488|phosphatidylinositol glycan anchor biosynthesis, class B	0.0	
chr15	74677649	74677716	reg1036881.p2	3.663	+	AB528448 DQ891578 DQ894771 CU689338 M14565 BC032329 TSC_hg19_v1_chr15_-_74659988 AK225715 AK292300 AK293204 AK293211 AK300178 AK310362 NM_000781	-17679	-	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	-19147	-	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	-66777	+	NM_001146030 TSC_hg19_v1_chr15_-_74726050	48347	-	AF071542 AM180445 AM180446 AM180447 AM180448 AM180449 AM180450 AM180451 TSC_hg19_v1_chr15_-_74726300 AF030698 AF069493 BC101643 BC101647 AK293280 AK312257 NM_001146029 NM_003612	48630	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	75765	-	DQ891578|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##DQ894771|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##M14565|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##BC032329|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK225715|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292300|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293204|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK293211|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK300178|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK310362|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_000781|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##NM_001146030|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF071542|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180445|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180446|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180447|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180448|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180449|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180450|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AM180451|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF030698|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AF069493|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101643|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##BC101647|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK293280|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AK312257|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_001146029|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##NM_003612|SEMA7A|8482|semaphorin 7A, GPI membrane anchor (John Milton Hagen blood group)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)	0.0	
chr17	37914429	37914557	reg1036313.p1	3.663	+	AK290115 NM_001242443	-18274	+	AK125544 NM_001242442	-19470	+	AK294620 NM_001030002 BC006535 TSC_hg19_v1_chr17_+_37894600	-19914	+	BC032707 AF129512 AY377973 AY377975 AY377976 AY377977 AY377978 AY377979 AY377980 AY377981 AY377982 NM_012481 NM_183228 NM_183229 NM_183230 NM_183231 NM_183232	105937	-	AK292383 NM_198844 NM_199321 BC043152 AY251603 AY251604	109950	+	AF119884 NM_018530	159299	-	AK290115|GRB7|2886|growth factor receptor-bound protein 7##NM_001242443|GRB7|2886|growth factor receptor-bound protein 7##AK125544|GRB7|2886|growth factor receptor-bound protein 7##NM_001242442|GRB7|2886|growth factor receptor-bound protein 7##AK294620|GRB7|2886|growth factor receptor-bound protein 7##NM_001030002|GRB7|2886|growth factor receptor-bound protein 7##BC006535|GRB7|2886|growth factor receptor-bound protein 7##BC032707|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AF129512|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377973|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377975|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377976|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377977|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377978|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377979|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377980|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377981|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AY377982|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_012481|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183228|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183229|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183230|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183231|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##NM_183232|IKZF3|22806|IKAROS family zinc finger 3 (Aiolos)##AK292383|ZPBP2|124626|zona pellucida binding protein 2##NM_198844|ZPBP2|124626|zona pellucida binding protein 2##NM_199321|ZPBP2|124626|zona pellucida binding protein 2##BC043152|ZPBP2|124626|zona pellucida binding protein 2##AY251603|ZPBP2|124626|zona pellucida binding protein 2##AY251604|ZPBP2|124626|zona pellucida binding protein 2##AF119884|GSDMB|55876|gasdermin B##NM_018530|GSDMB|55876|gasdermin B	0.0	
chr20	35456110	35456213	reg1035842.p1	3.663	+	TSC_hg19_v1_chr20_-_35444558 AK131491	-11541	-	AK057056 TSC_hg19_v1_chr20_-_35407842	-48385	-	TSC_hg19_v1_chr20_-_35402167 BC035821 AK093031 AX747868 AK290738 NM_001145316 NM_024918 AK301671 AK301840 BC058899 AK023408 BC026011 NM_001145315 NM_001145317 NM_001145318	-53976	-	AK126630 NM_199181	32114	-	TSC_hg19_v1_chr20_-_35492072 NM_080627	35973	-	TSC_hg19_v1_chr20_+_35504544 BC127688 BC130646 BC130648 AK123544 NM_080628 HQ258755	48388	+	AK131491|KIAA0889|140710|KIAA0889##AK057056|KIAA0889|140710|KIAA0889##BC035821|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK093031|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK290738|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145316|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_024918|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301671|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301840|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC058899|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK023408|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC026011|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145315|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145317|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145318|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK126630|KIAA0889|140710|KIAA0889##NM_199181|KIAA0889|140710|KIAA0889##NM_080627|KIAA0889|140710|KIAA0889##BC127688|C20orf118|140711|chromosome 20 open reading frame 118##BC130646|C20orf118|140711|chromosome 20 open reading frame 118##BC130648|C20orf118|140711|chromosome 20 open reading frame 118##AK123544|C20orf118|140711|chromosome 20 open reading frame 118##NM_080628|C20orf118|140711|chromosome 20 open reading frame 118##HQ258755|C20orf118|140711|chromosome 20 open reading frame 118	0.0	
chr20	46122268	46122373	reg1037513.p2	3.663	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-136832	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-145673	-	TSC_hg19_v1_chr20_-_45927496 BC030721	-194751	-	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	8302	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	8364	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	292432	-	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2	0.0	
chr2	203023597	203023724	reg1039531.p1	3.663	+	AB017365 NM_003507 AB010881 BC015915 CU677505	-124321	+	AB053308 AX772791 NM_139158 AK131512 BX647394 BC038807 EU831752 EU831828	-352368	+	NM_001135745 NM_020919	-377766	-	X99586 TSC_hg19_v1_chr2_-_203103288 U38784 U67122 BC053528 AK311840 BC005899 AB062294 BC066306 BC006462 U83117 U61397 NM_001005781 NM_001005782 NM_003352	79608	-	TSC_hg19_v1_chr2_+_203130458 AK300844 AK307396 AL117554 BC001707	106796	+	TSC_hg19_v1_chr2_+_203130493 BC018805 BC009306 BC032592 NM_015934 DQ890868 EU176490 AB528451 CU689436 AF123534 AF263608	106912	+	AB017365|FZD7|8324|frizzled family receptor 7##NM_003507|FZD7|8324|frizzled family receptor 7##AB010881|FZD7|8324|frizzled family receptor 7##BC015915|FZD7|8324|frizzled family receptor 7##AB053308|CDK15|65061|cyclin-dependent kinase 15##AX772791|CDK15|65061|cyclin-dependent kinase 15##NM_139158|CDK15|65061|cyclin-dependent kinase 15##AK131512|CDK15|65061|cyclin-dependent kinase 15##BX647394|CDK15|65061|cyclin-dependent kinase 15##BC038807|CDK15|65061|cyclin-dependent kinase 15##EU831752|CDK15|65061|cyclin-dependent kinase 15##EU831828|CDK15|65061|cyclin-dependent kinase 15##NM_001135745|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##NM_020919|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##X99586|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U38784|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U67122|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC053528|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK311840|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC005899|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AB062294|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC066306|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC006462|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U83117|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U61397|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005781|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005782|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_003352|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK300844|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK307396|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AL117554|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC001707|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC018805|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC009306|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC032592|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##NM_015934|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##DQ890868|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##EU176490|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AF123534|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AF263608|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)	0.0	
chr3	103129232	103129330	reg1035737.p1	3.663	+	AY090780 NM_175056 BC143817	-975414	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-1560907	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-1582321	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	1956299	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	1956541	+	CR749655 TSC_hg19_v1_chr3_-_105421064	2291773	-	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.719579	CTCF.p2:6:0.720
chr4	6875184	6875282	reg1003996.p1	3.663	+	TSC_hg19_v1_chr4_+_6784518 AK124715 EF553521	-90705	+	TSC_hg19_v1_chr4_+_6784467 BC150286 D86985	-90759	+	TSC_hg19_v1_chr4_+_6784458 NM_001100590 NM_014743	-90778	+	TSC_hg19_v1_chr4_+_6911192 NM_001113361	35919	+	TSC_hg19_v1_chr4_-_6911379 BC032036	36172	-	TSC_hg19_v1_chr4_+_6911497 NM_020773	36243	+	AK124715|KIAA0232|9778|KIAA0232##EF553521|KIAA0232|9778|KIAA0232##BC150286|KIAA0232|9778|KIAA0232##D86985|KIAA0232|9778|KIAA0232##NM_001100590|KIAA0232|9778|KIAA0232##NM_014743|KIAA0232|9778|KIAA0232##NM_001113361|TBC1D14|57533|TBC1 domain family, member 14##NM_020773|TBC1D14|57533|TBC1 domain family, member 14	0.965112	CTCF.p2:2:0.965
chr7	5632439	5632553	reg1040209.p1	3.663	+	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	-58	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-62287	-	TSC_hg19_v1_chr7_-_5569235 BC012854 CU680416 EF095209 BC008633 DQ471327 AB385102 DQ890960 DQ894128 K00790	-63250	-	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	14	+	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	188726	-	BC004947 TSC_hg19_v1_chr7_-_5821284 AK297231 BC063825 AK092767 AX747717 AK297416 BX537406 NM_207111 NM_207116 AK292396	188813	-	NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##BC012854|ACTB|60|actin, beta##EF095209|ACTB|60|actin, beta##BC008633|ACTB|60|actin, beta##DQ471327|ACTB|60|actin, beta##DQ890960|ACTB|60|actin, beta##DQ894128|ACTB|60|actin, beta##K00790|ACTB|60|actin, beta##BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216##BC004947|RNF216|54476|ring finger protein 216##AK297231|RNF216|54476|ring finger protein 216##BC063825|RNF216|54476|ring finger protein 216##AK092767|RNF216|54476|ring finger protein 216##AK297416|RNF216|54476|ring finger protein 216##BX537406|RNF216|54476|ring finger protein 216##NM_207111|RNF216|54476|ring finger protein 216##NM_207116|RNF216|54476|ring finger protein 216##AK292396|RNF216|54476|ring finger protein 216	0.0	
chr10	104405783	104405864	reg1030725.p1	3.662	+	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	-1539	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	-142004	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	-142104	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	68274	-	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	68522	+	TSC_hg19_v1_chr10_+_104503704 AK300871	97847	+	NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2##AK300871|C10orf26|54838|chromosome 10 open reading frame 26	0.034031	
chr10	7453355	7453448	reg1032777.p2	3.662	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	-2151	-	TSC_hg19_v1_chr10_+_6622460 AY007155	-830921	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	-831140	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	33	-	AK027849 TSC_hg19_v1_chr10_-_7659249	205816	-	BC004282 NM_032817	208223	-	AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##AY007155|LOC439949|439949|uncharacterized LOC439949##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC004282|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_032817|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.0	
chr10	96723726	96723836	reg1034575.p1	3.662	+	TSC_hg19_v1_chr10_+_96698414 AK289420 AK298458 BC020754 NM_000771 BC070317 M61855 M61857 BC125054 D00173 M21939 M15331 S46963	-25339	+	M61854 AB463557 NM_000769	-201322	+	NM_000772 NM_001128925 M61856 BC069666 BC096257 BC096258 BC096259 BC096260 M61853 TSC_hg19_v1_chr10_+_96443551 AK223510 AK313403 CU686960	-280368	+	M21942 M21941 DQ891400 DQ894579 M17397 M17398 AK303813 Y00498 AK292753 AK293327 AK293328 AK298401 AK315823 BC020596 NM_000770 NM_001198853 NM_001198854 NM_001198855	105382	-	AK126134 NM_207321	230175	+	AJ310549 CU674454 EU446864 AB464004 TSC_hg19_v1_chr10_-_97050757 BC018755 AK314792 BC000915 NM_020992	327001	-	AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61854|CYP2C19|1557|cytochrome P450, family 2, subfamily C, polypeptide 19##NM_000769|CYP2C19|1557|cytochrome P450, family 2, subfamily C, polypeptide 19##NM_000772|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##NM_001128925|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##M61856|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC069666|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096257|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096258|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096259|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096260|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##M61853|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##AK223510|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##AK313403|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##M21942|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M21941|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ891400|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##DQ894579|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17397|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##M17398|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK303813|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##Y00498|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK292753|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293327|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK293328|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK298401|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK315823|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##BC020596|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_000770|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198853|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198854|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##NM_001198855|CYP2C8|1558|cytochrome P450, family 2, subfamily C, polypeptide 8##AK126134|C10orf129|142827|chromosome 10 open reading frame 129##NM_207321|C10orf129|142827|chromosome 10 open reading frame 129##AJ310549|PDLIM1|9124|PDZ and LIM domain 1##EU446864|PDLIM1|9124|PDZ and LIM domain 1##BC018755|PDLIM1|9124|PDZ and LIM domain 1##AK314792|PDLIM1|9124|PDZ and LIM domain 1##BC000915|PDLIM1|9124|PDZ and LIM domain 1##NM_020992|PDLIM1|9124|PDZ and LIM domain 1	0.509242	CTCF.p2:-14:0.509
chr1	150194021	150194127	reg1040709.p1	3.662	+	TSC_hg19_v1_chr1_+_150122415 AB464030 AK222921 CU679641 DQ893381 DQ896780 AF073836	-71636	+	TSC_hg19_v1_chr1_+_150122268 AF217956 AF168676 BC010149	-71770	+	TSC_hg19_v1_chr1_+_150122120 AK302255 AF192912 AF291105 NM_016274	-71942	+	AK095228 NM_001136479	12951	-	AB528764 AM393076 AL833660 TSC_hg19_v1_chr1_-_150208332 AK303333 BC003380 AL832664 AK303392 AK223469	14193	-	AY057381 TSC_hg19_v1_chr1_-_150208461 AK092672 AX747663	14377	-	AK222921|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ893381|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ896780|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF073836|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF217956|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF168676|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##BC010149|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AK302255|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF192912|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF291105|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##NM_016274|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AK095228|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##NM_001136479|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AM393076|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL833660|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303333|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##BC003380|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AL832664|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK303392|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK223469|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AY057381|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E##AK092672|ANP32E|81611|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	0.057653	
chr1	153326200	153326301	reg1031782.p1	3.662	+	AY035377 NM_020393 AF242518	-5218	-	BC128114 BC128115 BC069741 BC069798 BC069801 AY035376 NM_052891	-43071	-	BC108290 NM_000427	-94072	+	AK311882 NM_002965 X06233 TSC_hg19_v1_chr1_+_153330329 BC047681 AF086362	4088	+	X97859 BC070294 D83664 NM_005621	21815	-	Y00278 AK291328 X06234 NM_002964	37353	-	AY035377|PGLYRP4|57115|peptidoglycan recognition protein 4##NM_020393|PGLYRP4|57115|peptidoglycan recognition protein 4##AF242518|PGLYRP4|57115|peptidoglycan recognition protein 4##BC128114|PGLYRP3|114771|peptidoglycan recognition protein 3##BC128115|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069741|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069798|PGLYRP3|114771|peptidoglycan recognition protein 3##BC069801|PGLYRP3|114771|peptidoglycan recognition protein 3##AY035376|PGLYRP3|114771|peptidoglycan recognition protein 3##NM_052891|PGLYRP3|114771|peptidoglycan recognition protein 3##BC108290|LOR|4014|loricrin##NM_000427|LOR|4014|loricrin##AK311882|S100A9|6280|S100 calcium binding protein A9##NM_002965|S100A9|6280|S100 calcium binding protein A9##X06233|S100A9|6280|S100 calcium binding protein A9##BC047681|S100A9|6280|S100 calcium binding protein A9##AF086362|S100A9|6280|S100 calcium binding protein A9##X97859|S100A12|6283|S100 calcium binding protein A12##BC070294|S100A12|6283|S100 calcium binding protein A12##D83664|S100A12|6283|S100 calcium binding protein A12##NM_005621|S100A12|6283|S100 calcium binding protein A12##Y00278|S100A8|6279|S100 calcium binding protein A8##AK291328|S100A8|6279|S100 calcium binding protein A8##X06234|S100A8|6279|S100 calcium binding protein A8##NM_002964|S100A8|6279|S100 calcium binding protein A8	0.833379	CTCF.p2:-1:0.833
chr1	19219911	19219978	reg1047043.p2	3.662	+	AK294552 NM_001161504	-2560	-	NM_152232 AB527225	-33789	-	NM_001135254 NM_002584 NM_013945 X96743	-262445	+	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	9210	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	62855	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	316802	-	AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001136265|IFFO2|126917|intermediate filament family orphan 2##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4	0.0	
chr12	68981311	68981422	reg1035650.p1	3.662	+	TSC_hg19_v1_chr12_-_68726142 BC010622 AK297311 BC034945 BC022042 AF267851 BC028355 AK314461 NM_001205028 NM_001205029 NM_017440 NM_020128	-255260	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	-334062	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	-361814	-	TSC_hg19_v1_chr12_+_69004678 NM_001010942 NM_001251917 NM_001251918 NM_001251921 NM_001251922 NM_015646	23280	+	TSC_hg19_v1_chr12_+_69004704 AK312371 BC078173 AK316447 AJ420497 AK298818 AK316543	23329	+	AK301401 AK301428 TSC_hg19_v1_chr12_+_69004708	23342	+	BC010622|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK297311|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC034945|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC022042|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AF267851|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC028355|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK314461|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205028|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205029|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_017440|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_020128|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##NM_001010942|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251917|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251918|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251921|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_001251922|RAP1B|5908|RAP1B, member of RAS oncogene family##NM_015646|RAP1B|5908|RAP1B, member of RAS oncogene family##AK312371|RAP1B|5908|RAP1B, member of RAS oncogene family##BC078173|RAP1B|5908|RAP1B, member of RAS oncogene family##AK316447|RAP1B|5908|RAP1B, member of RAS oncogene family##AJ420497|RAP1B|5908|RAP1B, member of RAS oncogene family##AK298818|RAP1B|5908|RAP1B, member of RAS oncogene family##AK316543|RAP1B|5908|RAP1B, member of RAS oncogene family##AK301401|RAP1B|5908|RAP1B, member of RAS oncogene family##AK301428|RAP1B|5908|RAP1B, member of RAS oncogene family	0.0	
chr14	76015692	76015794	reg1035235.p2	3.662	+	TSC_hg19_v1_chr14_+_75988840 D42106	-26891	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	-26953	+	BC051303 NM_001135049	-116907	+	NM_017791 AY260572 AY260577 BC019087 AK000378	29222	+	AK297002 NM_001195283	56061	+	AF134159 TSC_hg19_v1_chr14_-_76127220 AK311764 AL136658 AF136971 AF161406 BC002444	111453	-	D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AF134159|C14orf1|11161|chromosome 14 open reading frame 1##AK311764|C14orf1|11161|chromosome 14 open reading frame 1##AL136658|C14orf1|11161|chromosome 14 open reading frame 1##AF136971|C14orf1|11161|chromosome 14 open reading frame 1##AF161406|C14orf1|11161|chromosome 14 open reading frame 1##BC002444|C14orf1|11161|chromosome 14 open reading frame 1	0.032544	
chr16	12070409	12070516	reg1038111.p2	3.662	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-11378	+	NM_001130007	-59944	-	TSC_hg19_v1_chr16_-_12009919 AK315267	-60534	-	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	111	+	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	827189	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	827257	-	NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AK315267|GSPT1|2935|G1 to S phase transition 1##AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1	0.0	
chr17	8858369	8858491	reg1031008.p2	3.662	+	AY725853 AF128881 NM_014308	-42614	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-87446	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-155878	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	10551	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	66537	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	620701	-	AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8	0.0	
chr19	42774892	42774959	reg1044188.p2	3.662	+	AK300627 TSC_hg19_v1_chr19_-_42759281 AK314278 NM_006494	-15620	-	AB463618 CU692500 DQ893568 DQ896817 TSC_hg19_v1_chr19_-_42759278 BC022231 U15655	-15711	-	TSC_hg19_v1_chr19_-_42746755 BC027984	-28167	-	TSC_hg19_v1_chr19_+_42788616 AF363689 DQ388764 NM_015125 AB527445	13804	+	BC063021 AK291528 NM_199285	31341	+	AB528706 CR407626 TSC_hg19_v1_chr19_-_42806760 D63391 BC007863 BC003016 NM_002573	31735	-	AK300627|ERF|2077|Ets2 repressor factor##AK314278|ERF|2077|Ets2 repressor factor##NM_006494|ERF|2077|Ets2 repressor factor##DQ893568|ERF|2077|Ets2 repressor factor##DQ896817|ERF|2077|Ets2 repressor factor##BC022231|ERF|2077|Ets2 repressor factor##U15655|ERF|2077|Ets2 repressor factor##BC027984|GSK3A|2931|glycogen synthase kinase 3 alpha##AF363689|CIC|23152|capicua homolog (Drosophila)##NM_015125|CIC|23152|capicua homolog (Drosophila)##BC063021|PRR19|284338|proline rich 19##AK291528|PRR19|284338|proline rich 19##NM_199285|PRR19|284338|proline rich 19##CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	0.011584	
chr19	45257825	45257942	reg1038527.p1	3.662	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	-5902	+	BC144608 NM_001039213	-55463	+	BC083499 NM_001127893 NM_020219	-83160	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	23273	+	TSC_hg19_v1_chr19_+_45312359 BC014065 NM_001013257 NM_005581 X83425 BC036745 X80026 BC050450 AB463427 CU690688 HE572749	54473	+	NM_001042724 NM_002856 TSC_hg19_v1_chr19_+_45349482	91559	+	NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##BC083499|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_001127893|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_020219|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_001042724|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##NM_002856|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)	0.0	
chr1	9473246	9473387	reg1039945.p1	3.662	+	TSC_hg19_v1_chr1_+_9415945 CU677397	-57370	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	-120347	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	-120379	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	126216	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	126320	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	175640	+	AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201	0.0	
chr20	15246678	15246810	reg1037559.p1	3.662	+	BC018687 NM_001033087	-69241	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-928488	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-1270408	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	1307269	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	1463919	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	1482277	+	BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin	0.729997	CTCF.p2:14:0.730
chr20	17876395	17876575	reg1033737.p2	3.662	+	BC054871 NM_001014977 NM_178477 BC062735	-195887	+	NM_001159495	-202166	+	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	-213602	-	BT007191 AB464237 TSC_hg19_v1_chr20_-_17949155 AK223308 AK001793 AK129505 NM_014426 BC093623 BC093980 BC143274	72729	-	TSC_hg19_v1_chr20_-_17949438 BC002724 BC062638 BC064555 BC073171 AK123903 AK308017 AK296947 BC000100 AF121855 NM_152227	72955	-	TSC_hg19_v1_chr20_+_17949742 AF306686 AK315532 AF306684 AF306685 AK027503 BC016869 NM_052865	73177	+	BC054871|BANF2|140836|barrier to autointegration factor 2##NM_001014977|BANF2|140836|barrier to autointegration factor 2##NM_178477|BANF2|140836|barrier to autointegration factor 2##BC062735|BANF2|140836|barrier to autointegration factor 2##NM_001159495|BANF2|140836|barrier to autointegration factor 2##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BT007191|SNX5|27131|sorting nexin 5##AK223308|SNX5|27131|sorting nexin 5##AK001793|SNX5|27131|sorting nexin 5##AK129505|SNX5|27131|sorting nexin 5##NM_014426|SNX5|27131|sorting nexin 5##BC093623|SNX5|27131|sorting nexin 5##BC093980|SNX5|27131|sorting nexin 5##BC143274|SNX5|27131|sorting nexin 5##BC002724|SNX5|27131|sorting nexin 5##BC062638|SNX5|27131|sorting nexin 5##AK123903|SNX5|27131|sorting nexin 5##AK308017|SNX5|27131|sorting nexin 5##AK296947|SNX5|27131|sorting nexin 5##BC000100|SNX5|27131|sorting nexin 5##AF121855|SNX5|27131|sorting nexin 5##NM_152227|SNX5|27131|sorting nexin 5##AF306686|C20orf72|92667|chromosome 20 open reading frame 72##AK315532|C20orf72|92667|chromosome 20 open reading frame 72##AF306684|C20orf72|92667|chromosome 20 open reading frame 72##AF306685|C20orf72|92667|chromosome 20 open reading frame 72##AK027503|C20orf72|92667|chromosome 20 open reading frame 72##BC016869|C20orf72|92667|chromosome 20 open reading frame 72##NM_052865|C20orf72|92667|chromosome 20 open reading frame 72	0.0	
chr20	37501971	37502075	reg1027298.p2	3.662	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	-67669	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	-124911	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-148864	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	52966	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	53045	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	88966	+	AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35	0.0	
chr5	169098779	169098864	reg1030333.p3	3.662	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-34521	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-34577	+	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	-88100	+	AK055998 NM_001129891	308922	-	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	434150	+	BC030767 NM_001102609 BC092511	561175	+	D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58	0.0	
chr5	43484465	43484563	reg1037614.p2	3.662	+	BC013351 BC063832 AK094078 TSC_hg19_v1_chr5_-_43483947 AK025310 AK225220 NM_022483 AK315466	-550	-	AB590493 AF220210 CU686894 HM067700 BC062668 BC069532 AF266504 AF110384 AK312120 NM_148672	-72062	-	TSC_hg19_v1_chr5_-_43397231 AK307307	-87288	-	BC036867 AK303336 TSC_hg19_v1_chr5_-_43515205 AK056925 NM_198566	30692	-	TSC_hg19_v1_chr5_-_43556944 DQ891110 EU176558	72414	-	CU675095 TSC_hg19_v1_chr5_-_43556949	72435	-	BC013351|C5orf28|64417|chromosome 5 open reading frame 28##BC063832|C5orf28|64417|chromosome 5 open reading frame 28##AK025310|C5orf28|64417|chromosome 5 open reading frame 28##AK225220|C5orf28|64417|chromosome 5 open reading frame 28##NM_022483|C5orf28|64417|chromosome 5 open reading frame 28##AK315466|C5orf28|64417|chromosome 5 open reading frame 28##AF220210|CCL28|56477|chemokine (C-C motif) ligand 28##HM067700|CCL28|56477|chemokine (C-C motif) ligand 28##BC062668|CCL28|56477|chemokine (C-C motif) ligand 28##BC069532|CCL28|56477|chemokine (C-C motif) ligand 28##AF266504|CCL28|56477|chemokine (C-C motif) ligand 28##AF110384|CCL28|56477|chemokine (C-C motif) ligand 28##AK312120|CCL28|56477|chemokine (C-C motif) ligand 28##NM_148672|CCL28|56477|chemokine (C-C motif) ligand 28##AK307307|CCL28|56477|chemokine (C-C motif) ligand 28##BC036867|C5orf34|375444|chromosome 5 open reading frame 34##AK303336|C5orf34|375444|chromosome 5 open reading frame 34##AK056925|C5orf34|375444|chromosome 5 open reading frame 34##NM_198566|C5orf34|375444|chromosome 5 open reading frame 34##DQ891110|PAIP1|10605|poly(A) binding protein interacting protein 1##EU176558|PAIP1|10605|poly(A) binding protein interacting protein 1	0.181753	
chr5	58334591	58334772	reg1045478.p1	3.662	+	BC036319 NM_001197223	-38923	-	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	-455762	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	-547387	+	U50157 U50158 TSC_hg19_v1_chr5_-_58335364 AF012074 NM_001197221 NM_001197222 U79571	697	-	TSC_hg19_v1_chr5_-_58571918 AY245867 NM_001197220	237249	-	AB528028 AF536977 NM_001197219 TSC_hg19_v1_chr5_-_58652809	318062	-	BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##U50157|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U50158|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF012074|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197221|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197222|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##U79571|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AY245867|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197220|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF536977|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197219|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.011968	
chr7	83898266	83898382	reg1039303.p2	3.662	+	NM_006080 AK289954 TSC_hg19_v1_chr7_-_83824406	-74002	-	NM_012431	-619846	-	AK303925 NM_001178129	-627578	-	NM_152754	852922	-	AK309116 TSC_hg19_v1_chr7_-_84816296	917911	-	TSC_hg19_v1_chr7_+_86273224 BC041407 NM_000840	2374901	+	NM_006080|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##AK289954|SEMA3A|10371|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A##NM_012431|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##AK303925|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_001178129|SEMA3E|9723|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E##NM_152754|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##AK309116|SEMA3D|223117|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D##BC041407|GRM3|2913|glutamate receptor, metabotropic 3##NM_000840|GRM3|2913|glutamate receptor, metabotropic 3	0.0	
chr9	6632799	6632914	reg1032539.p2	3.662	+	TSC_hg19_v1_chr9_+_6413338 AF274049 AB071698 EU176286 EU176602 AB385208	-219451	+	TSC_hg19_v1_chr9_+_6413200 AK308433	-219659	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	-219712	+	BC111993 BC111995 M63635 D90239 M64590 AK314156 NM_000170	12771	-	AK310439 NM_001146696	88006	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	124811	+	AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK308433|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC111993|GLDC|2731|glycine dehydrogenase (decarboxylating)##BC111995|GLDC|2731|glycine dehydrogenase (decarboxylating)##M63635|GLDC|2731|glycine dehydrogenase (decarboxylating)##D90239|GLDC|2731|glycine dehydrogenase (decarboxylating)##M64590|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK314156|GLDC|2731|glycine dehydrogenase (decarboxylating)##NM_000170|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C	0.0	
chrX	55828363	55828461	reg1030241.p1	3.662	+	TSC_hg19_v1_chrX_+_55744181 NM_006064 NM_016656 AL831926 AK289407 BC034726 X90530	-84224	+	BC012934 NM_198451	-178580	+	NM_201286 BC035907	-312780	-	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	430498	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	761639	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	927279	+	NM_006064|RRAGB|10325|Ras-related GTP binding B##NM_016656|RRAGB|10325|Ras-related GTP binding B##AL831926|RRAGB|10325|Ras-related GTP binding B##AK289407|RRAGB|10325|Ras-related GTP binding B##BC034726|RRAGB|10325|Ras-related GTP binding B##X90530|RRAGB|10325|Ras-related GTP binding B##BC012934|FOXR2|139628|forkhead box R2##NM_198451|FOXR2|139628|forkhead box R2##NM_201286|USP51|158880|ubiquitin specific peptidase 51##BC035907|USP51|158880|ubiquitin specific peptidase 51##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643	0.01431	
chr11	6384234	6384414	reg1009445.p1	3.661	+	DQ892300 DQ895499 BC038387 TSC_hg19_v1_chr11_-_6341732 BC011585 NM_145040 AF339881	-42591	-	NM_176875 D13305 S70057 L07746 AK292064 AK226020 BC000740 AK314266 AB527993 AF239668 Y13464 DQ890577 DQ893737 AF441129 AY029770 AY322551 BT006789 L04473 L08112	-103294	+	NM_001037329 AK122736	-123999	+	TSC_hg19_v1_chr11_+_6411681 NM_000543 NM_001007593 AB209775 AK292388 X59960 BC041164 M59916 AY649987 HQ132745 HQ132746 HQ132747 HQ132748	27408	+	TSC_hg19_v1_chr11_-_6440299 AK293452 AF394214 L77864 NM_001164 AK293613 AK294495 AK311725	55999	-	AK297544 BC010854 NM_145689 TSC_hg19_v1_chr11_-_6440647	56316	-	DQ892300|PRKCDBP|112464|protein kinase C, delta binding protein##DQ895499|PRKCDBP|112464|protein kinase C, delta binding protein##BC038387|PRKCDBP|112464|protein kinase C, delta binding protein##BC011585|PRKCDBP|112464|protein kinase C, delta binding protein##NM_145040|PRKCDBP|112464|protein kinase C, delta binding protein##AF339881|PRKCDBP|112464|protein kinase C, delta binding protein##NM_176875|CCKBR|887|cholecystokinin B receptor##D13305|CCKBR|887|cholecystokinin B receptor##S70057|CCKBR|887|cholecystokinin B receptor##L07746|CCKBR|887|cholecystokinin B receptor##AK292064|CCKBR|887|cholecystokinin B receptor##AK226020|CCKBR|887|cholecystokinin B receptor##BC000740|CCKBR|887|cholecystokinin B receptor##AK314266|CCKBR|887|cholecystokinin B receptor##AF239668|CCKBR|887|cholecystokinin B receptor##DQ890577|CCKBR|887|cholecystokinin B receptor##DQ893737|CCKBR|887|cholecystokinin B receptor##AF441129|CCKBR|887|cholecystokinin B receptor##AY029770|CCKBR|887|cholecystokinin B receptor##AY322551|CCKBR|887|cholecystokinin B receptor##BT006789|CCKBR|887|cholecystokinin B receptor##L04473|CCKBR|887|cholecystokinin B receptor##L08112|CCKBR|887|cholecystokinin B receptor##NM_001037329|CNGA4|1262|cyclic nucleotide gated channel alpha 4##AK122736|CNGA4|1262|cyclic nucleotide gated channel alpha 4##NM_000543|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##NM_001007593|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AB209775|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK292388|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##X59960|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##BC041164|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##M59916|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AY649987|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132745|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132746|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132747|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##HQ132748|SMPD1|6609|sphingomyelin phosphodiesterase 1, acid lysosomal##AK293452|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AF394214|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##L77864|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_001164|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK293613|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK294495|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK311725|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##AK297544|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##BC010854|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)##NM_145689|APBB1|322|amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)	0.0	
chr11	81674204	81674301	reg1034786.p1	3.661	+	NM_001098816 TSC_hg19_v1_chr11_-_79151755	-2522528	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	-3388357	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	-3388460	-	BC150621 TSC_hg19_v1_chr11_-_82444907 BC039262 NM_175885	770646	-	TSC_hg19_v1_chr11_-_82611462 AB451270 AB451397 DQ893068 DQ896321 BC001500 AK312919 AK091786 AX747184 L13977 NM_005040 NM_199418	937265	-	NM_145018 AK058145 TSC_hg19_v1_chr11_+_82612768 BC039268 AK096157 AK297366 AK292399 AK299581	938522	+	NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##BC150621|FAM181B|220382|family with sequence similarity 181, member B##BC039262|FAM181B|220382|family with sequence similarity 181, member B##NM_175885|FAM181B|220382|family with sequence similarity 181, member B##AB451270|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AB451397|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ893068|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##DQ896321|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##BC001500|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK312919|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##AK091786|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##L13977|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_005040|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_199418|PRCP|5547|prolylcarboxypeptidase (angiotensinase C)##NM_145018|C11orf82|220042|chromosome 11 open reading frame 82##AK058145|C11orf82|220042|chromosome 11 open reading frame 82##BC039268|C11orf82|220042|chromosome 11 open reading frame 82##AK096157|C11orf82|220042|chromosome 11 open reading frame 82##AK297366|C11orf82|220042|chromosome 11 open reading frame 82##AK292399|C11orf82|220042|chromosome 11 open reading frame 82##AK299581|C11orf82|220042|chromosome 11 open reading frame 82	0.997662	CTCF.p2:9:0.998
chr16	20236700	20236772	reg1039708.p1	3.661	+	AB196529 AY635179 BC137237 BC137238 BC144547 NM_001002911 AK291384	-151649	-	AK295204 AF202640 TSC_hg19_v1_chr16_-_19896168 BC034467 AF181862 NM_016235 AK294680 AK075119 AK315989 AK296754	-340572	-	TSC_hg19_v1_chr16_-_19729532 BC117562 NM_001012991	-507249	-	U36221 AK312277 BX647831 BX648201 BX649067 BX648023 NM_001007240 NM_001007241 NM_001007242 NM_001502 CR749600	102117	-	AK127643 AK055722 AK091961 AK096043 AX747279 M15881 BC035975 AK127648 NM_001008389 NM_003361	127296	-	BC042607 BC044936 NM_174924 AK097476	179309	-	AB196529|GPR139|124274|G protein-coupled receptor 139##AY635179|GPR139|124274|G protein-coupled receptor 139##BC137237|GPR139|124274|G protein-coupled receptor 139##BC137238|GPR139|124274|G protein-coupled receptor 139##NM_001002911|GPR139|124274|G protein-coupled receptor 139##AK291384|GPR139|124274|G protein-coupled receptor 139##AK295204|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF202640|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC034467|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AF181862|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##NM_016235|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK294680|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK075119|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK315989|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##AK296754|GPRC5B|51704|G protein-coupled receptor, family C, group 5, member B##BC117562|C16orf88|400506|chromosome 16 open reading frame 88##NM_001012991|C16orf88|400506|chromosome 16 open reading frame 88##U36221|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK312277|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX647831|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648201|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX649067|GP2|2813|glycoprotein 2 (zymogen granule membrane)##BX648023|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007240|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007241|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001007242|GP2|2813|glycoprotein 2 (zymogen granule membrane)##NM_001502|GP2|2813|glycoprotein 2 (zymogen granule membrane)##CR749600|GP2|2813|glycoprotein 2 (zymogen granule membrane)##AK127643|UMOD|7369|uromodulin##AK055722|UMOD|7369|uromodulin##AK091961|UMOD|7369|uromodulin##AK096043|UMOD|7369|uromodulin##M15881|UMOD|7369|uromodulin##BC035975|UMOD|7369|uromodulin##AK127648|UMOD|7369|uromodulin##NM_001008389|UMOD|7369|uromodulin##NM_003361|UMOD|7369|uromodulin##BC042607|PDILT|204474|protein disulfide isomerase-like, testis expressed##BC044936|PDILT|204474|protein disulfide isomerase-like, testis expressed##NM_174924|PDILT|204474|protein disulfide isomerase-like, testis expressed##AK097476|PDILT|204474|protein disulfide isomerase-like, testis expressed	0.0	
chr3	43810844	43811025	reg1004529.p1	3.661	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-78513	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-147421	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-147496	-	AK093476 AX748152 NM_001145030	472443	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	568696	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	569013	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.0	
chr4	135827744	135827843	reg1033331.p2	3.661	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-704875	-	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	-1754510	+	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	-1757337	+	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	2625799	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	2625849	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	3335571	-	NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	0.09986	
chr5	49559392	49559500	reg1033739.p1	3.661	+	AF488549 NM_021072	-3863227	-	AF064876 TSC_hg19_v1_chr5_-_45695947	-3863555	-	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	-4750419	+	AK300860 TSC_hg19_v1_chr5_-_49737200 BC059398	177753	-	TSC_hg19_v1_chr5_-_49737229 NM_198449	177797	-	AK298680 AK314466 BC105789 NM_001178055	402286	+	AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AK300860|EMB|133418|embigin##BC059398|EMB|133418|embigin##NM_198449|EMB|133418|embigin##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	0.0	
chr5	55965895	55965992	reg1027165.p1	3.661	+	AK123389 NM_024669	-436758	-	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-675180	-	NM_001242636 NM_001242639	-816794	+	NM_005921	144956	+	TSC_hg19_v1_chr5_+_56111375 AK307828	145421	+	TSC_hg19_v1_chr5_+_56111395 AF042838	145475	+	AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr7	139360218	139360306	reg1039360.p2	3.661	+	NM_001080511	-151589	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-191830	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-315248	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	117643	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	117777	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	168830	+	NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.0	
chrX	119584142	119584247	reg1037380.p1	3.661	+	AK309999 NM_001142447 NM_012069 AF158383 AF158384 BC117227 BC143404 BC143406 BC143407 HQ258396	-88214	+	TSC_hg19_v1_chrX_-_119445320 AF450484 AK056403 NM_001104544 NM_001104545 NM_017938	-138841	-	TSC_hg19_v1_chrX_-_119445289 AK289684 BC047054	-138909	-	AK304405 TSC_hg19_v1_chrX_-_119602986	18730	-	TSC_hg19_v1_chrX_-_119603051 AY561849 AB528277 CU678318 DQ892095 DQ895288	18839	-	TSC_hg19_v1_chrX_-_119603122 J04183	18906	-	AK309999|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##NM_001142447|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##NM_012069|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF158383|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF158384|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC117227|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143404|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143406|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##BC143407|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##HQ258396|ATP1B4|23439|ATPase, Na+/K+ transporting, beta 4 polypeptide##AF450484|FAM70A|55026|family with sequence similarity 70, member A##AK056403|FAM70A|55026|family with sequence similarity 70, member A##NM_001104544|FAM70A|55026|family with sequence similarity 70, member A##NM_001104545|FAM70A|55026|family with sequence similarity 70, member A##NM_017938|FAM70A|55026|family with sequence similarity 70, member A##AK289684|FAM70A|55026|family with sequence similarity 70, member A##BC047054|FAM70A|55026|family with sequence similarity 70, member A##AK304405|LAMP2|3920|lysosomal-associated membrane protein 2##AY561849|LAMP2|3920|lysosomal-associated membrane protein 2##DQ892095|LAMP2|3920|lysosomal-associated membrane protein 2##DQ895288|LAMP2|3920|lysosomal-associated membrane protein 2##J04183|LAMP2|3920|lysosomal-associated membrane protein 2	0.828023	CTCF.p2:37:0.828
chrX	135755849	135755970	reg1033083.p1	3.661	+	AK129909 TSC_hg19_v1_chrX_-_135749484	-6443	-	BC071754 NM_000074 AK292637 X68550 X67878 L07414 BC074950 X96710 Z15017 FN298241 CU687160 AB590912 AF529195 AY197739	-25538	+	BC000045 NM_016267 AK309912 BC003362 AF137387	-141542	+	AK294929 TSC_hg19_v1_chrX_-_135849503 AK295709 AK299861	93598	-	D25304 TSC_hg19_v1_chrX_-_135863046 AK291742	107144	-	TSC_hg19_v1_chrX_-_135863105 BX537390	107200	-	AK129909|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##BC071754|CD40LG|959|CD40 ligand##NM_000074|CD40LG|959|CD40 ligand##AK292637|CD40LG|959|CD40 ligand##X68550|CD40LG|959|CD40 ligand##X67878|CD40LG|959|CD40 ligand##L07414|CD40LG|959|CD40 ligand##BC074950|CD40LG|959|CD40 ligand##Z15017|CD40LG|959|CD40 ligand##FN298241|CD40LG|959|CD40 ligand##AF529195|CD40LG|959|CD40 ligand##AY197739|CD40LG|959|CD40 ligand##BC000045|VGLL1|51442|vestigial like 1 (Drosophila)##NM_016267|VGLL1|51442|vestigial like 1 (Drosophila)##AK309912|VGLL1|51442|vestigial like 1 (Drosophila)##BC003362|VGLL1|51442|vestigial like 1 (Drosophila)##AF137387|VGLL1|51442|vestigial like 1 (Drosophila)##AK294929|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK295709|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK299861|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##D25304|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##AK291742|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6##BX537390|ARHGEF6|9459|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	0.0	
chr10	17659875	17660038	reg1029179.p2	3.660	+	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	-583	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	-163591	-	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	-163742	-	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	26274	+	NM_001098844 BC157856	134298	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	191447	+	BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1	0.0	
chr12	118619482	118619592	reg1012382.p1	3.660	+	TSC_hg19_v1_chr12_+_118573963 AB528565 X85033	-45559	+	TSC_hg19_v1_chr12_+_118573928 BC008714 AK311927 D16111 BC018799 AK308056 BC031102 AK299414 HM131449	-45614	+	TSC_hg19_v1_chr12_+_118573907 NM_002567 BC017396 X75252 AK226006	-45662	+	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	191091	-	TSC_hg19_v1_chr12_-_118810713 NM_016281	191193	-	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	194865	+	X85033|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC008714|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK311927|PEBP1|5037|phosphatidylethanolamine binding protein 1##D16111|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC018799|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK308056|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC031102|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK299414|PEBP1|5037|phosphatidylethanolamine binding protein 1##HM131449|PEBP1|5037|phosphatidylethanolamine binding protein 1##NM_002567|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC017396|PEBP1|5037|phosphatidylethanolamine binding protein 1##X75252|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK226006|PEBP1|5037|phosphatidylethanolamine binding protein 1##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##NM_016281|TAOK3|51347|TAO kinase 3##BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)	0.79633	CTCF.p2:19:0.796
chr13	45491907	45491974	reg1035340.p1	3.660	+	TSC_hg19_v1_chr13_-_45150604 AB082525 NM_001243799 NM_183422	-341290	-	AK091854 AX747223 TSC_hg19_v1_chr13_-_45150467 BC136475 BC136482	-341510	-	NM_001243798	-443504	-	TSC_hg19_v1_chr13_-_45563607 AB528019 AF159548 BC001436 AK314242 NM_012345	71655	-	TSC_hg19_v1_chr13_+_45563672 AK304669 BC017776 BC039586 NM_018559 AK292493 AF145122 BC032333 AB051491	71784	+	TSC_hg19_v1_chr13_+_45694638 NM_004128 AK291545	202674	+	AB082525|TSC22D1|8848|TSC22 domain family, member 1##NM_001243799|TSC22D1|8848|TSC22 domain family, member 1##NM_183422|TSC22D1|8848|TSC22 domain family, member 1##AK091854|TSC22D1|8848|TSC22 domain family, member 1##BC136475|TSC22D1|8848|TSC22 domain family, member 1##BC136482|TSC22D1|8848|TSC22 domain family, member 1##NM_001243798|TSC22D1|8848|TSC22 domain family, member 1##AF159548|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##BC001436|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AK314242|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##NM_012345|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AK304669|KIAA1704|55425|KIAA1704##BC017776|KIAA1704|55425|KIAA1704##BC039586|KIAA1704|55425|KIAA1704##NM_018559|KIAA1704|55425|KIAA1704##AK292493|KIAA1704|55425|KIAA1704##AF145122|KIAA1704|55425|KIAA1704##BC032333|KIAA1704|55425|KIAA1704##AB051491|KIAA1704|55425|KIAA1704##NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	0.0	
chr15	70393140	70393290	reg1033323.p4	3.660	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-2972	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-2988	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-51306	-	TSC_hg19_v1_chr15_-_70878946 BC040579	485729	-	BC016881 AL834243 NM_001008224 AK055435	601412	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	662627	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.0	
chr17	75141431	75141612	reg1030097.p1	3.660	+	TSC_hg19_v1_chr17_+_75137104 AK290913 BC142979 BC136523 BC136525	-4386	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	-4487	+	NM_001204410 FM995496 AF130050	-56253	+	AK293206 NM_001144001	39773	+	NM_001113491 AF189713 TSC_hg19_v1_chr17_+_75277583 AJ312323 AK300270 AK300268 BC054004	136021	+	AK290368 NM_001113492 TSC_hg19_v1_chr17_+_75283980	142458	+	AK290913|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC142979|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136523|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136525|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001204410|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995496|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AF130050|LINC00338|654434|long intergenic non-protein coding RNA 338##AK293206|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001144001|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001113491|SEPT9|10801|septin 9##AF189713|SEPT9|10801|septin 9##AJ312323|SEPT9|10801|septin 9##AK300270|SEPT9|10801|septin 9##AK300268|SEPT9|10801|septin 9##BC054004|SEPT9|10801|septin 9##AK290368|SEPT9|10801|septin 9##NM_001113492|SEPT9|10801|septin 9	0.013066	
chr19	44267650	44267722	reg1039539.p1	3.660	+	TSC_hg19_v1_chr19_-_44259117 NM_019108	-8558	-	TSC_hg19_v1_chr19_-_44259074 AK022948	-8593	-	TSC_hg19_v1_chr19_-_44259063 AK309830 BC008869 AL136606	-8666	-	AB128983 AB128984 AB128985 AF000972 AF022150 BT007426 CU677271 DQ891493 DQ894684 BC015337 AF395661 TSC_hg19_v1_chr19_-_44285137 AF033021	17389	-	TSC_hg19_v1_chr19_-_44285437 AF022797 NM_002250	17754	-	CU691254 AY358719 BC057816 AK301693 NM_001031749	38882	-	NM_019108|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK022948|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK309830|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC008869|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL136606|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AB128983|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128984|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128985|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF000972|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF022150|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##BT007426|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##DQ891493|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##DQ894684|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##BC015337|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF395661|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF033021|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF022797|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##NM_002250|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AY358719|LYPD5|284348|LY6/PLAUR domain containing 5##BC057816|LYPD5|284348|LY6/PLAUR domain containing 5##AK301693|LYPD5|284348|LY6/PLAUR domain containing 5##NM_001031749|LYPD5|284348|LY6/PLAUR domain containing 5	0.0	
chr20	56025387	56025477	reg1033584.p1	3.660	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-58975	+	NM_001190472	-90555	-	AK292247 AY349350 NM_001015885	-98831	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	74769	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	110725	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	170106	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.0	
chr3	135761589	135761710	reg1031319.p1	3.660	+	NM_181897 AK316258 L12146	-20031	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	-77029	+	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	-77118	+	AK302491 NM_001145417	151643	-	TSC_hg19_v1_chr3_-_135914658 AK091956 NM_018133	153032	-	X73424 NM_000532 NM_001178014 TSC_hg19_v1_chr3_+_135969181	207515	+	NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK302491|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_001145417|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##AK091956|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##NM_018133|MSL2|55167|male-specific lethal 2 homolog (Drosophila)##X73424|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_000532|PCCB|5096|propionyl CoA carboxylase, beta polypeptide##NM_001178014|PCCB|5096|propionyl CoA carboxylase, beta polypeptide	0.999298	CTCF.p2:8:0.999
chr3	178169737	178169867	reg1038242.p2	3.660	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1254743	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	-1254851	-	TSC_hg19_v1_chr3_-_176914267 BX648935	-1255552	-	BC017825 NM_181361	84421	+	AF209747 NM_005832	106750	+	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	619763	-	AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3	0.151536	
chr1	41131620	41131719	reg1036615.p1	3.659	+	D87074 NM_014747 TSC_hg19_v1_chr1_-_41131355	-326	-	TSC_hg19_v1_chr1_-_41131126 BC003103	-535	-	TSC_hg19_v1_chr1_+_40997324 BC091518	-134357	+	NM_001142587 NM_001142588 NM_001142589 NM_014223 TSC_hg19_v1_chr1_+_41157288	25603	+	TSC_hg19_v1_chr1_+_41157365 AK301215 AK301385 Z70024 Z74792	25688	+	BC005003 TSC_hg19_v1_chr1_+_41157398	25726	+	D87074|RIMS3|9783|regulating synaptic membrane exocytosis 3##NM_014747|RIMS3|9783|regulating synaptic membrane exocytosis 3##BC003103|RIMS3|9783|regulating synaptic membrane exocytosis 3##BC091518|ZNF684|127396|zinc finger protein 684##NM_001142587|NFYC|4802|nuclear transcription factor Y, gamma##NM_001142588|NFYC|4802|nuclear transcription factor Y, gamma##NM_001142589|NFYC|4802|nuclear transcription factor Y, gamma##NM_014223|NFYC|4802|nuclear transcription factor Y, gamma##AK301215|NFYC|4802|nuclear transcription factor Y, gamma##AK301385|NFYC|4802|nuclear transcription factor Y, gamma##Z70024|NFYC|4802|nuclear transcription factor Y, gamma##Z74792|NFYC|4802|nuclear transcription factor Y, gamma##BC005003|NFYC|4802|nuclear transcription factor Y, gamma	0.0	
chr16	57023235	57023416	reg1036759.p1	3.659	+	M30185 AK297699 NM_000078 TSC_hg19_v1_chr16_+_56995861 AK291586 BC025739 EU176529 CU693046 BT020064 M83573	-27488	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	-57184	+	NM_001010989 NM_001010990 NM_014685	-57578	+	TSC_hg19_v1_chr16_+_57023474 AK097030	135	+	AK074182 NM_032206	27660	+	AF389420 EF452236 TSC_hg19_v1_chr16_+_57054697	31335	+	M30185|CETP|1071|cholesteryl ester transfer protein, plasma##AK297699|CETP|1071|cholesteryl ester transfer protein, plasma##NM_000078|CETP|1071|cholesteryl ester transfer protein, plasma##AK291586|CETP|1071|cholesteryl ester transfer protein, plasma##BC025739|CETP|1071|cholesteryl ester transfer protein, plasma##EU176529|CETP|1071|cholesteryl ester transfer protein, plasma##BT020064|CETP|1071|cholesteryl ester transfer protein, plasma##M83573|CETP|1071|cholesteryl ester transfer protein, plasma##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK097030|NLRC5|84166|NLR family, CARD domain containing 5##AK074182|NLRC5|84166|NLR family, CARD domain containing 5##NM_032206|NLRC5|84166|NLR family, CARD domain containing 5##AF389420|NLRC5|84166|NLR family, CARD domain containing 5##EF452236|NLRC5|84166|NLR family, CARD domain containing 5	0.0	
chr18	9575623	9575730	reg1031089.p1	3.659	+	TSC_hg19_v1_chr18_+_9475545 NM_006788 BC013126	-100079	+	TSC_hg19_v1_chr18_+_9334831 BC020490 AK315751	-240819	+	TSC_hg19_v1_chr18_+_9334800 AK027629 AK075550 NM_020648 AF196834 AJ297391	-240886	+	TSC_hg19_v1_chr18_-_9614547 AF200478 AK293869 AK292538	38828	-	AK027064 TSC_hg19_v1_chr18_-_9614566 BC060829 AK315106 AF111106 NM_001042388 NM_005134	38901	-	TSC_hg19_v1_chr18_+_9708217 AF234995 NM_006868	132533	+	NM_006788|RALBP1|10928|ralA binding protein 1##BC013126|RALBP1|10928|ralA binding protein 1##BC020490|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK315751|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK027629|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AK075550|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##NM_020648|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AF196834|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AJ297391|TWSG1|57045|twisted gastrulation homolog 1 (Drosophila)##AF200478|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK293869|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK292538|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK027064|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##BC060829|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AK315106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF111106|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_001042388|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##NM_005134|PPP4R1|9989|protein phosphatase 4, regulatory subunit 1##AF234995|RAB31|11031|RAB31, member RAS oncogene family##NM_006868|RAB31|11031|RAB31, member RAS oncogene family	0.0	
chr22	44464851	44464936	reg1035054.p2	3.659	+	AK308443 NM_001243386	-42710	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	-44694	+	AF303887 NM_001003828	-69803	+	BC039811 NM_001243385	103	+	NM_001137605 AK309348 AK293360	103963	+	NM_022141 AK225929 AK307294 BC034406 AF237772	111919	+	AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##AF303887|PARVB|29780|parvin, beta##NM_001003828|PARVB|29780|parvin, beta##BC039811|PARVB|29780|parvin, beta##NM_001243385|PARVB|29780|parvin, beta##NM_001137605|PARVG|64098|parvin, gamma##AK309348|PARVG|64098|parvin, gamma##AK293360|PARVG|64098|parvin, gamma##NM_022141|PARVG|64098|parvin, gamma##AK225929|PARVG|64098|parvin, gamma##AK307294|PARVG|64098|parvin, gamma##BC034406|PARVG|64098|parvin, gamma##AF237772|PARVG|64098|parvin, gamma	0.0	
chr3	157299861	157299956	reg1044364.p1	3.659	+	NM_001099777 NM_001130001 NM_001130002 NM_001243729 BC126187 BC126189 BC144066 BC029129 BC010062	-38726	+	BC078142 BC057999 NM_001167915 NM_001167916	-78520	-	BC111017 AB051479 NM_001167911 NM_001167912	-78777	-	TSC_hg19_v1_chr3_-_157823531 AK309293	523631	-	HQ258019 AJ002367 TSC_hg19_v1_chr3_-_157823847 BC008829 NM_001163678 NM_003030 NM_006884	523975	-	TSC_hg19_v1_chr3_+_157827910 AK290334 BC006982 NM_016625 AF208853 BC010357	527983	+	NM_001099777|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130001|C3orf55|152078|chromosome 3 open reading frame 55##NM_001130002|C3orf55|152078|chromosome 3 open reading frame 55##NM_001243729|C3orf55|152078|chromosome 3 open reading frame 55##BC126187|C3orf55|152078|chromosome 3 open reading frame 55##BC126189|C3orf55|152078|chromosome 3 open reading frame 55##BC144066|C3orf55|152078|chromosome 3 open reading frame 55##BC029129|C3orf55|152078|chromosome 3 open reading frame 55##BC010062|C3orf55|152078|chromosome 3 open reading frame 55##BC078142|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC057999|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167915|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167916|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##BC111017|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##AB051479|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167911|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##NM_001167912|VEPH1|79674|ventricular zone expressed PH domain homolog 1 (zebrafish)##HQ258019|SHOX2|6474|short stature homeobox 2##AJ002367|SHOX2|6474|short stature homeobox 2##BC008829|SHOX2|6474|short stature homeobox 2##NM_001163678|SHOX2|6474|short stature homeobox 2##NM_003030|SHOX2|6474|short stature homeobox 2##NM_006884|SHOX2|6474|short stature homeobox 2##AK290334|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC006982|RSRC1|51319|arginine/serine-rich coiled-coil 1##NM_016625|RSRC1|51319|arginine/serine-rich coiled-coil 1##AF208853|RSRC1|51319|arginine/serine-rich coiled-coil 1##BC010357|RSRC1|51319|arginine/serine-rich coiled-coil 1	0.0	
chr3	182208545	182208646	reg1035470.p2	3.659	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-778457	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-778882	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-791203	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	302692	+	AK296750 TSC_hg19_v1_chr3_+_182511291	302700	+	TSC_hg19_v1_chr3_+_182511375 AF156548	302794	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.931852	CTCF.p2:-8:0.932
chr3	31734367	31734449	reg1017934.p2	3.659	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	-159926	+	TSC_hg19_v1_chr3_+_31574468 AK074587	-159959	+	TSC_hg19_v1_chr3_+_31574119 AK311488	-160278	+	TSC_hg19_v1_chr3_-_32022751 BC003168 AF346291 AK304067 AK097503	288361	-	AK294003 NM_001137674	288857	+	AF392451 NM_001174060 NM_017784	288881	-	AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##BC003168|OSBPL10|114884|oxysterol binding protein-like 10##AF346291|OSBPL10|114884|oxysterol binding protein-like 10##AK304067|OSBPL10|114884|oxysterol binding protein-like 10##AK294003|ZNF860|344787|zinc finger protein 860##NM_001137674|ZNF860|344787|zinc finger protein 860##AF392451|OSBPL10|114884|oxysterol binding protein-like 10##NM_001174060|OSBPL10|114884|oxysterol binding protein-like 10##NM_017784|OSBPL10|114884|oxysterol binding protein-like 10	0.060449	
chr4	38080453	38080577	reg1036314.p1	3.659	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-101498	+	AF095288 BC069114 BC069400 NM_006607	-118460	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-187726	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	585311	+	AF289565 TSC_hg19_v1_chr4_-_38666549	585974	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	704084	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr5	76924853	76924981	reg1040552.p1	3.659	+	TSC_hg19_v1_chr5_-_76788333 AK001766 BC001807 NM_018268	-136602	-	AK296423 AK300058 TSC_hg19_v1_chr5_-_76788142 AK021855	-136772	-	TSC_hg19_v1_chr5_-_76788048 AK293316 AK295249 CU691838 AK304329 AK023977 AF115511 BC040241	-136851	-	EU446696 AB527841 TSC_hg19_v1_chr5_-_76934486	9512	-	TSC_hg19_v1_chr5_-_76934509 BC001800 NM_032109	9597	-	BT007354 CR542170 CR542186 TSC_hg19_v1_chr5_-_77072105 AK300031 BC067837 BC105285 AF038952 AK312207 AK128395 BC018210 NM_004607	147215	-	AK001766|WDR41|55255|WD repeat domain 41##BC001807|WDR41|55255|WD repeat domain 41##NM_018268|WDR41|55255|WD repeat domain 41##AK296423|WDR41|55255|WD repeat domain 41##AK300058|WDR41|55255|WD repeat domain 41##AK021855|WDR41|55255|WD repeat domain 41##AK293316|WDR41|55255|WD repeat domain 41##AK295249|WDR41|55255|WD repeat domain 41##AK304329|WDR41|55255|WD repeat domain 41##AK023977|WDR41|55255|WD repeat domain 41##AF115511|WDR41|55255|WD repeat domain 41##BC040241|WDR41|55255|WD repeat domain 41##EU446696|OTP|23440|orthopedia homeobox##BC001800|OTP|23440|orthopedia homeobox##NM_032109|OTP|23440|orthopedia homeobox##BT007354|TBCA|6902|tubulin folding cofactor A##CR542170|TBCA|6902|tubulin folding cofactor A##CR542186|TBCA|6902|tubulin folding cofactor A##AK300031|TBCA|6902|tubulin folding cofactor A##BC067837|TBCA|6902|tubulin folding cofactor A##BC105285|TBCA|6902|tubulin folding cofactor A##AF038952|TBCA|6902|tubulin folding cofactor A##AK312207|TBCA|6902|tubulin folding cofactor A##BC018210|TBCA|6902|tubulin folding cofactor A##NM_004607|TBCA|6902|tubulin folding cofactor A	0.800468	CTCF.p2:-32:0.748
chr9	85945284	85945387	reg1033543.p1	3.659	+	GQ129452 BC023560 NM_001244962	-63188	-	BC023566 NM_152573 TSC_hg19_v1_chr9_-_85678058 AK056176	-267269	-	AK290986 TSC_hg19_v1_chr9_-_85677861	-267510	-	BC037253 NM_001244961	1540	-	NM_001244960 AY137774	137324	-	AK094281 EF560742 TSC_hg19_v1_chr9_-_86153270 AK297722 AK223597 NM_001244959 NM_174938 BC041376	207870	-	GQ129452|FRMD3|257019|FERM domain containing 3##BC023560|FRMD3|257019|FERM domain containing 3##NM_001244962|FRMD3|257019|FERM domain containing 3##BC023566|RASEF|158158|RAS and EF-hand domain containing##NM_152573|RASEF|158158|RAS and EF-hand domain containing##AK056176|RASEF|158158|RAS and EF-hand domain containing##AK290986|RASEF|158158|RAS and EF-hand domain containing##BC037253|FRMD3|257019|FERM domain containing 3##NM_001244961|FRMD3|257019|FERM domain containing 3##NM_001244960|FRMD3|257019|FERM domain containing 3##AY137774|FRMD3|257019|FERM domain containing 3##AK094281|FRMD3|257019|FERM domain containing 3##EF560742|FRMD3|257019|FERM domain containing 3##AK297722|FRMD3|257019|FERM domain containing 3##AK223597|FRMD3|257019|FERM domain containing 3##NM_001244959|FRMD3|257019|FERM domain containing 3##NM_174938|FRMD3|257019|FERM domain containing 3##BC041376|FRMD3|257019|FERM domain containing 3	0.761507	CTCF.p2:-20:0.762
chr10	12375928	12376057	reg1038091.p2	3.658	+	TSC_hg19_v1_chr10_+_12238212 BC001600 AK289362 CR456966	-137766	+	TSC_hg19_v1_chr10_+_12238194 BC009598	-137793	+	TSC_hg19_v1_chr10_+_12238186 U27112 AK308790	-137810	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	15583	+	TSC_hg19_v1_chr10_+_12391709 BC035745	15725	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	15785	+	BC001600|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289362|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##CR456966|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##BC009598|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##U27112|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK308790|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID	0.0	
chr1	148248021	148248202	reg1020767.p2	3.658	+	NM_001164261 NM_001164262	-45576	-	TSC_hg19_v1_chr1_-_148176396 BC110832	-71715	-	AL117237 NM_015383 BC094705	-222257	-	NM_001170755 AK097180	310116	+	NM_173638 BC023087	312806	+	NM_001102663 AK290302 AY894566	329305	+	NM_001164261|PPIAL4D|645142|peptidylprolyl isomerase A (cyclophilin A)-like 4D##NM_001164262|PPIAL4F|728945|peptidylprolyl isomerase A (cyclophilin A)-like 4F##AL117237|NBPF14|25832|neuroblastoma breakpoint family, member 14##NM_015383|NBPF14|25832|neuroblastoma breakpoint family, member 14##BC094705|NBPF1|55672|neuroblastoma breakpoint family, member 1##NM_001170755|NBPF15|284565|neuroblastoma breakpoint family, member 15##AK097180|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_173638|NBPF15|284565|neuroblastoma breakpoint family, member 15##BC023087|NBPF15|284565|neuroblastoma breakpoint family, member 15##NM_001102663|NBPF16|728936|neuroblastoma breakpoint family, member 16##AK290302|NBPF15|284565|neuroblastoma breakpoint family, member 15##AY894566|NBPF15|284565|neuroblastoma breakpoint family, member 15	0.0	
chr12	104283744	104283877	reg1036101.p2	3.658	+	TSC_hg19_v1_chr12_-_104234976 BC052293 NM_001031701	-48831	-	AB032773 TSC_hg19_v1_chr12_-_104234857	-48986	-	AY311388 AJ295695 NM_017564 AB052958	-302749	+	TSC_hg19_v1_chr12_+_104324159 AJ890084 AK025459	40348	+	TSC_hg19_v1_chr12_+_104324187 AK298996 AK300521 NM_003299 S74939 X15187	40377	+	TSC_hg19_v1_chr12_+_104324199 BC066656	40389	+	BC052293|NT5DC3|51559|5'-nucleotidase domain containing 3##NM_001031701|NT5DC3|51559|5'-nucleotidase domain containing 3##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AJ890084|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK025459|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK298996|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##AK300521|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##NM_003299|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##X15187|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1##BC066656|HSP90B1|7184|heat shock protein 90kDa beta (Grp94), member 1	0.0	
chr1	22108772	22108953	reg1033172.p1	3.658	+	AB007943 M64788 TSC_hg19_v1_chr1_-_21995851 NM_001145657 NM_002885	-113029	-	BC054490 TSC_hg19_v1_chr1_-_21978334 NM_001145658	-130515	-	AB003930 TSC_hg19_v1_chr1_-_21949064	-159825	-	CU679968 AB384973 AK315005 BC104896 BC143343 BC143349 BC143354 TSC_hg19_v1_chr1_-_22109586 AK074247 AF502942 BC011576	663	-	TSC_hg19_v1_chr1_-_22109643 BC103724 BC067261	772	-	TSC_hg19_v1_chr1_-_22109701 AK026930 NM_001032730 NM_032236	837	-	AB007943|RAP1GAP|5909|RAP1 GTPase activating protein##M64788|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145657|RAP1GAP|5909|RAP1 GTPase activating protein##NM_002885|RAP1GAP|5909|RAP1 GTPase activating protein##BC054490|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145658|RAP1GAP|5909|RAP1 GTPase activating protein##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein##AK315005|USP48|84196|ubiquitin specific peptidase 48##BC104896|USP48|84196|ubiquitin specific peptidase 48##BC143343|USP48|84196|ubiquitin specific peptidase 48##BC143349|USP48|84196|ubiquitin specific peptidase 48##BC143354|USP48|84196|ubiquitin specific peptidase 48##AK074247|USP48|84196|ubiquitin specific peptidase 48##AF502942|USP48|84196|ubiquitin specific peptidase 48##BC011576|USP48|84196|ubiquitin specific peptidase 48##BC103724|USP48|84196|ubiquitin specific peptidase 48##BC067261|USP48|84196|ubiquitin specific peptidase 48##NM_001032730|USP48|84196|ubiquitin specific peptidase 48##NM_032236|USP48|84196|ubiquitin specific peptidase 48	0.0	
chr18	7038518	7038654	reg1012412.p2	3.658	+	NM_001010000 BX648684 AK308259 AK302026	-204121	+	NM_001243517	-527172	+	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	-623671	-	BC144590 NM_005559 X58531	79198	-	NM_001105581	192550	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	528731	+	NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M	0.0	
chr22	25960118	25960191	reg1041219.p2	3.658	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	-116078	+	BC139736 NM_001135772	-182611	-	AL137651 NM_182492	-201631	-	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	645	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	792	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	177966	+	BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB	0.107481	
chr2	64880909	64881017	reg1033564.p2	3.658	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-114	-	TSC_hg19_v1_chr2_+_64751580 AL833962	-129361	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	-129479	+	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	84	-	TSC_hg19_v1_chr2_-_65090764 AK097952	209778	-	TSC_hg19_v1_chr2_-_65159574 BC037562	278614	-	BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##AL833962|AFTPH|54812|aftiphilin##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC037562|LOC400958|400958|uncharacterized LOC400958	0.0	
chr3	196730045	196730151	reg1018422.p2	3.658	+	BC032042 TSC_hg19_v1_chr3_+_196729798	-288	+	TSC_hg19_v1_chr3_-_196695705 BC018804 BC044640 AK022830 NM_025163	-34420	-	TSC_hg19_v1_chr3_+_196669559 AL832915 BC000257 BC007882	-60527	+	BT007377 AB527337 M12154 BC093920 BC111947 BC143257 BC002623 BC001875 BC007550 BC053510 BC071910 TSC_hg19_v1_chr3_-_196756658 BC032752	26525	-	TSC_hg19_v1_chr3_-_196756689 NM_033316 NM_005929	26604	-	AK294855 NM_001204387 NM_001204388	180903	-	BC032042|MFI2-AS1|100507057|MFI2 antisense RNA 1 (non-protein coding)##BC018804|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##BC044640|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##AK022830|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##NM_025163|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##AL832915|LOC152217|152217|uncharacterized LOC152217##BC000257|LOC152217|152217|uncharacterized LOC152217##BC007882|LOC152217|152217|uncharacterized LOC152217##BT007377|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##M12154|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC093920|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC111947|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC143257|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC002623|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC001875|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC007550|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC053510|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC071910|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##BC032752|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_033316|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##NM_005929|MFI2|4241|antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5##AK294855|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204387|DLG1|1739|discs, large homolog 1 (Drosophila)##NM_001204388|DLG1|1739|discs, large homolog 1 (Drosophila)	0.178902	
chr5	59880214	59880394	reg1042188.p1	3.658	+	TSC_hg19_v1_chr5_+_59784006 AL050198 AK094518	-96264	+	TSC_hg19_v1_chr5_-_59783893 AY245866 AK307363 NM_001165899	-96400	-	NM_001104631	-690684	-	TSC_hg19_v1_chr5_-_59995928 AF490257	115612	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	115661	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	259767	-	AL050198|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AK094518|PART1|25859|prostate androgen-regulated transcript 1 (non-protein coding)##AY245866|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AK307363|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001165899|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001104631|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##AF490257|DEPDC1B|55789|DEP domain containing 1B##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7	0.0	
chr6	74020120	74020193	reg1037868.p2	3.658	+	AK090984 BC035766 CR936715 NM_001251874	-270	-	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	-47183	+	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	-47290	-	BC137549 BC137558 NM_001025290	43842	-	AB211062 NM_001017361 BC132844 BC137160 HQ258760	52267	+	EU290647 NM_001080507	59358	-	AK090984|C6orf147|387097|chromosome 6 open reading frame 147##NM_001251874|KHDC1|80759|KH homology domain containing 1##BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1##BC137549|DPPA5|340168|developmental pluripotency associated 5##BC137558|DPPA5|340168|developmental pluripotency associated 5##NM_001025290|DPPA5|340168|developmental pluripotency associated 5##AB211062|C6orf221|154288|chromosome 6 open reading frame 221##NM_001017361|C6orf221|154288|chromosome 6 open reading frame 221##BC132844|C6orf221|154288|chromosome 6 open reading frame 221##BC137160|C6orf221|154288|chromosome 6 open reading frame 221##HQ258760|C6orf221|154288|chromosome 6 open reading frame 221##EU290647|OOEP|441161|oocyte expressed protein homolog (dog)##NM_001080507|OOEP|441161|oocyte expressed protein homolog (dog)	0.042547	
chr10	112172583	112172760	reg1033381.p1	3.657	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-107971	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-108078	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-186850	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	85080	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	154821	+	AF067163 TSC_hg19_v1_chr10_+_112344155	171444	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.0	
chr10	64415463	64415643	reg1029058.p2	3.657	+	AJ505150 NM_199452	-135347	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-281510	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-387014	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	148989	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	149104	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	160544	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.0	
chr13	99740113	99740179	reg1030913.p1	3.657	+	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	-1455	-	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	-109856	-	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	-335241	-	AK290342 NM_001144072	112532	+	TSC_hg19_v1_chr13_-_99852951 BC043515 AK097488	112821	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	112973	+	BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9##AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AK290342|UBAC2|337867|UBA domain containing 2##NM_001144072|UBAC2|337867|UBA domain containing 2##BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2	0.0	
chr14	75412027	75412208	reg1043415.p1	3.657	+	TSC_hg19_v1_chr14_-_75389964 BC036574 AK226137 AK054800	-22164	-	NM_031464	-22973	-	TSC_hg19_v1_chr14_+_75348624 NM_001244883 NM_001933 AK289414 BX248276 AK299505 AK316463 AK300396 BC000302 BC001922 BC002735 BX248764 D16373 CR456727 CU674146 L37418 BX248774	-63492	+	BX248289 NM_001207012 NM_002632	10349	-	NM_014239 TSC_hg19_v1_chr14_+_75469623 BX161473 BC000494 BC003165 AF035280 BC011750 CU680040 DQ891364 DQ894544 L40395	57544	+	AF195657 BC012544 TSC_hg19_v1_chr14_-_75518171 NM_001040108 NM_014381	106066	-	BC036574|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK226137|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK054800|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##NM_031464|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##NM_001244883|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##NM_001933|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK289414|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248276|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK299505|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK316463|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK300396|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC000302|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC001922|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC002735|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248764|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##D16373|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##CR456727|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##L37418|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248774|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248289|PGF|5228|placental growth factor##NM_001207012|PGF|5228|placental growth factor##NM_002632|PGF|5228|placental growth factor##NM_014239|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##BX161473|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##BC000494|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##BC003165|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##AF035280|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##BC011750|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##DQ891364|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##DQ894544|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##L40395|EIF2B2|8892|eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa##AF195657|MLH3|27030|mutL homolog 3 (E. coli)##BC012544|MLH3|27030|mutL homolog 3 (E. coli)##NM_001040108|MLH3|27030|mutL homolog 3 (E. coli)##NM_014381|MLH3|27030|mutL homolog 3 (E. coli)	0.203779	CTCF.p2:-4:0.204
chr15	67394734	67394915	reg1022805.p2	3.657	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	-36423	+	TSC_hg19_v1_chr15_+_67358179 AK290881	-36649	+	NM_001142861 U59914	-393895	+	NM_001145102 AK316017	23299	+	AK298139 NM_001145103	35534	+	NM_001145104 AK300614 AK301348	63672	+	NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##AK290881|SMAD3|4088|SMAD family member 3##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3##AK298139|SMAD3|4088|SMAD family member 3##NM_001145103|SMAD3|4088|SMAD family member 3##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3	0.0	
chr17	39653141	39653233	reg1031053.p2	3.657	+	NM_003771	-7072	-	AB463814 NM_002280 X90763	-15816	-	X81419 AB528846 NM_002278	-29631	-	AB528326 DQ890652 DQ893832 HQ258420 BC126184 BC136494 BC077718 X14640 BC002661 X52426 AK223051 AK223077 AK290244 AK296806 AK092276 AK309752 AX747448 NM_002274 NM_153490 TSC_hg19_v1_chr17_-_39661865	8647	-	BT007261 CU678086 DQ892990 DQ896238 AB527603 BC110649 BC002641 X07696 TSC_hg19_v1_chr17_-_39675141 AK304059 NM_002275	21986	-	CU679705 DQ892179 DQ895373 AB527586 Y00503 BC084574 BC002539 BC007628 BC010409 TSC_hg19_v1_chr17_-_39684561 AK313261 BC067744	31343	-	NM_003771|KRT36|8689|keratin 36##NM_002280|KRT35|3886|keratin 35##X90763|KRT35|3886|keratin 35##X81419|KRT32|3882|keratin 32##NM_002278|KRT32|3882|keratin 32##DQ890652|KRT13|3860|keratin 13##DQ893832|KRT13|3860|keratin 13##HQ258420|KRT13|3860|keratin 13##BC126184|KRT13|3860|keratin 13##BC136494|KRT13|3860|keratin 13##BC077718|KRT13|3860|keratin 13##X14640|KRT13|3860|keratin 13##BC002661|KRT13|3860|keratin 13##X52426|KRT13|3860|keratin 13##AK223051|KRT13|3860|keratin 13##AK223077|KRT13|3860|keratin 13##AK290244|KRT13|3860|keratin 13##AK296806|KRT13|3860|keratin 13##AK092276|KRT13|3860|keratin 13##AK309752|KRT13|3860|keratin 13##NM_002274|KRT13|3860|keratin 13##NM_153490|KRT13|3860|keratin 13##BT007261|KRT15|3866|keratin 15##DQ892990|KRT15|3866|keratin 15##DQ896238|KRT15|3866|keratin 15##BC110649|KRT15|3866|keratin 15##BC002641|KRT15|3866|keratin 15##X07696|KRT15|3866|keratin 15##AK304059|KRT15|3866|keratin 15##NM_002275|KRT15|3866|keratin 15##DQ892179|KRT19|3880|keratin 19##DQ895373|KRT19|3880|keratin 19##Y00503|KRT19|3880|keratin 19##BC084574|KRT19|3880|keratin 19##BC002539|KRT19|3880|keratin 19##BC007628|KRT19|3880|keratin 19##BC010409|KRT19|3880|keratin 19##AK313261|KRT19|3880|keratin 19##BC067744|KRT19|3880|keratin 19	0.821572	CTCF.p2:-27:0.822
chr17	47022347	47022528	reg1036751.p2	3.657	+	AB464229 CU679209 CU691602 TSC_hg19_v1_chr17_-_47022173 AF156102 BC008976 NM_007241 BC038830	-301	-	TSC_hg19_v1_chr17_+_46986002 BC015890 EF623992	-36465	+	AK130303 TSC_hg19_v1_chr17_+_46985840 AK024030 AK122770	-36603	+	BC096146 BC096147 BC096148 BC096149 BC069100 BC069663 BC069686 BC069746 M18185 NM_004123	23516	-	TSC_hg19_v1_chr17_+_47074830 NM_001160423 NM_006546 AF198254 AK313229	52393	+	AK302876 NM_001159388	187384	+	AF156102|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##BC008976|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##NM_007241|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##BC038830|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##BC015890|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##EF623992|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK130303|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK024030|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##AK122770|UBE2Z|65264|ubiquitin-conjugating enzyme E2Z##BC096146|GIP|2695|gastric inhibitory polypeptide##BC096147|GIP|2695|gastric inhibitory polypeptide##BC096148|GIP|2695|gastric inhibitory polypeptide##BC096149|GIP|2695|gastric inhibitory polypeptide##BC069100|GIP|2695|gastric inhibitory polypeptide##BC069663|GIP|2695|gastric inhibitory polypeptide##BC069686|GIP|2695|gastric inhibitory polypeptide##BC069746|GIP|2695|gastric inhibitory polypeptide##M18185|GIP|2695|gastric inhibitory polypeptide##NM_004123|GIP|2695|gastric inhibitory polypeptide##NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##AK302876|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159388|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2	0.0	
chr2	118293863	118293948	reg1031259.p2	3.657	+	NM_001178034 DQ857322 AK296490 NM_001004360 AY387785 AB040925 AB385475 DQ857323	-2374244	+	NM_001178037 DQ857321	-2471615	+	AK055256 BC038514 NM_001178036	-3074739	+	NM_006773 TSC_hg19_v1_chr2_+_118572276 BC024739	278363	+	AK001467 TSC_hg19_v1_chr2_+_118572283	278378	+	TSC_hg19_v1_chr2_+_118572298 BC003360 BC001238	278412	+	NM_001178034|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857322|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK296490|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001004360|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AY387785|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AB040925|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857323|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178037|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857321|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_006773|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC024739|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##AK001467|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC003360|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18##BC001238|DDX18|8886|DEAD (Asp-Glu-Ala-Asp) box polypeptide 18	0.874167	CTCF.p2:11:0.874
chr3	11278230	11278332	reg1001825.p1	3.657	+	TSC_hg19_v1_chr3_+_11267680 NM_001098211	-10608	+	NM_001098212 AK292157 AK312879	-82067	+	AK289412 NM_001098213	-99503	+	BC060802 NM_000861	16103	+	TSC_hg19_v1_chr3_+_11314033 NM_001136031 NM_001144912 NM_006395	35725	+	AK298833 TSC_hg19_v1_chr3_+_11314082 AK075221 AK303694	35796	+	NM_001098211|HRH1|3269|histamine receptor H1##NM_001098212|HRH1|3269|histamine receptor H1##AK292157|HRH1|3269|histamine receptor H1##AK312879|HRH1|3269|histamine receptor H1##AK289412|HRH1|3269|histamine receptor H1##NM_001098213|HRH1|3269|histamine receptor H1##BC060802|HRH1|3269|histamine receptor H1##NM_000861|HRH1|3269|histamine receptor H1##NM_001136031|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_001144912|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##NM_006395|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK298833|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK075221|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)##AK303694|ATG7|10533|ATG7 autophagy related 7 homolog (S. cerevisiae)	0.0	
chr6	3338090	3338247	reg1036677.p2	3.657	+	TSC_hg19_v1_chr6_-_3272352 BC090851 BC022217	-65738	-	TSC_hg19_v1_chr6_+_3259232 AK126623 AK095683	-78929	+	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	-79010	+	BC128580 BC128581 BC038748 NM_021945	107039	-	TSC_hg19_v1_chr6_-_3456513 AL110245	118346	-	BC040876 NM_015482	118595	-	BC090851|SLC22A23|63027|solute carrier family 22, member 23##BC022217|SLC22A23|63027|solute carrier family 22, member 23##AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##BC128580|SLC22A23|63027|solute carrier family 22, member 23##BC128581|SLC22A23|63027|solute carrier family 22, member 23##BC038748|SLC22A23|63027|solute carrier family 22, member 23##NM_021945|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23	0.0	
chr6	7107084	7107193	reg1037241.p1	3.657	+	BC039678 TSC_hg19_v1_chr6_+_6725205	-381977	+	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	-518188	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-786228	-	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	688	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	897	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	1085	+	NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1	0.01112	
chr7	23287802	23287919	reg1030397.p2	3.657	+	AF322909 TSC_hg19_v1_chr7_+_23286426 BC025297 BC011595 CU679974 CU689536 AB528457 DQ892084 DQ895277 BT007074	-1412	+	TSC_hg19_v1_chr7_+_23286407 AJ505015	-1455	+	TSC_hg19_v1_chr7_+_23286393 AK292078 AK296779 AK297031 AK297803 AY359124 BC032783	-1466	+	TSC_hg19_v1_chr7_+_23338957 BC012331 NM_138446 AK127742 AK316559	51105	+	TSC_hg19_v1_chr7_-_23509637 AB529064 CU688032	221819	-	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	222138	-	AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb##BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb##BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb##BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb##AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb##AK292078|GPNMB|10457|glycoprotein (transmembrane) nmb##AK296779|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297031|GPNMB|10457|glycoprotein (transmembrane) nmb##AK297803|GPNMB|10457|glycoprotein (transmembrane) nmb##AY359124|GPNMB|10457|glycoprotein (transmembrane) nmb##BC032783|GPNMB|10457|glycoprotein (transmembrane) nmb##BC012331|C7orf30|115416|chromosome 7 open reading frame 30##NM_138446|C7orf30|115416|chromosome 7 open reading frame 30##AK127742|C7orf30|115416|chromosome 7 open reading frame 30##AK316559|C7orf30|115416|chromosome 7 open reading frame 30##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3	0.0	
chr10	30818659	30818820	reg1026149.p2	3.656	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-95618	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-95800	+	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	-180506	-	AF139543 BC066294 NM_183058	99896	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	469713	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	502082	-	AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438	0.0	
chr11	48009551	48009620	reg1035622.p2	3.656	+	TSC_hg19_v1_chr11_+_48002270 AL359057 BC063417	-7226	+	D37781 TSC_hg19_v1_chr11_+_48002120	-7465	+	TSC_hg19_v1_chr11_+_48002110 NM_001098503 NM_002843 U10886	-7494	+	NM_001005470	228776	+	BC136935 BC136936 NM_001004727	257046	+	NM_001004726	275827	+	AL359057|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##BC063417|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##D37781|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_001098503|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_002843|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##U10886|PTPRJ|5795|protein tyrosine phosphatase, receptor type, J##NM_001005470|OR4B1|119765|olfactory receptor, family 4, subfamily B, member 1##BC136935|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##BC136936|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##NM_001004727|OR4X2|119764|olfactory receptor, family 4, subfamily X, member 2##NM_001004726|OR4X1|390113|olfactory receptor, family 4, subfamily X, member 1	0.0	
chr15	83775723	83775831	reg1031722.p1	3.656	+	NM_001011885 NM_025238 TSC_hg19_v1_chr15_-_83736124	-39662	-	TSC_hg19_v1_chr15_-_83736005 BC028097	-39773	-	TSC_hg19_v1_chr15_-_83735995 AB462966 AF529369 AM393763 AY364253 DQ891458 DQ894635 CU688394 BC017464 AK000731 AK225355 AK225362 AF355402 AF257241 AL136853	-39833	-	BC063487 NM_001144903 NM_023003 AF255922 TSC_hg19_v1_chr15_+_83776396 AK223246 AK292100 BC032007 CU687748 DQ021909 AK295568	601	+	AB529208 TSC_hg19_v1_chr15_-_83876576 BC015483 AB029156 AF110642 AF151900 AK001280 NM_016073	100637	-	BC040554 TSC_hg19_v1_chr15_-_83876823	101019	-	NM_001011885|BTBD1|53339|BTB (POZ) domain containing 1##NM_025238|BTBD1|53339|BTB (POZ) domain containing 1##BC028097|BTBD1|53339|BTB (POZ) domain containing 1##AF529369|BTBD1|53339|BTB (POZ) domain containing 1##AM393763|BTBD1|53339|BTB (POZ) domain containing 1##AY364253|BTBD1|53339|BTB (POZ) domain containing 1##DQ891458|BTBD1|53339|BTB (POZ) domain containing 1##DQ894635|BTBD1|53339|BTB (POZ) domain containing 1##BC017464|BTBD1|53339|BTB (POZ) domain containing 1##AK000731|BTBD1|53339|BTB (POZ) domain containing 1##AK225355|BTBD1|53339|BTB (POZ) domain containing 1##AK225362|BTBD1|53339|BTB (POZ) domain containing 1##AF355402|BTBD1|53339|BTB (POZ) domain containing 1##AF257241|BTBD1|53339|BTB (POZ) domain containing 1##AL136853|BTBD1|53339|BTB (POZ) domain containing 1##BC063487|TM6SF1|53346|transmembrane 6 superfamily member 1##NM_001144903|TM6SF1|53346|transmembrane 6 superfamily member 1##NM_023003|TM6SF1|53346|transmembrane 6 superfamily member 1##AF255922|TM6SF1|53346|transmembrane 6 superfamily member 1##AK223246|TM6SF1|53346|transmembrane 6 superfamily member 1##AK292100|TM6SF1|53346|transmembrane 6 superfamily member 1##BC032007|TM6SF1|53346|transmembrane 6 superfamily member 1##DQ021909|TM6SF1|53346|transmembrane 6 superfamily member 1##AK295568|TM6SF1|53346|transmembrane 6 superfamily member 1##BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	0.0	
chr19	16658666	16658846	reg1035837.p2	3.656	+	TSC_hg19_v1_chr19_-_16653256 NM_006387	-5493	-	BC021294 TSC_hg19_v1_chr19_-_16653249	-5508	-	TSC_hg19_v1_chr19_-_16653240 AK296883	-5517	-	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	24440	-	TSC_hg19_v1_chr19_+_16683381 AK094229	24641	+	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	80244	-	NM_006387|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##BC021294|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK296883|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26	0.0	
chr20	52376911	52377071	reg1027881.p2	3.656	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-166192	-	AF041259 NM_006526	-177356	-	AK302570 NM_001193421	-575170	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	310071	-	AK315220 NM_003657	310312	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	413529	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr2	20646832	20646923	reg1031328.p2	3.656	+	AK310813 AK312487 AK124398 AK297495 AK309991 BC066954 NM_004040	-45	+	TSC_hg19_v1_chr2_-_20550436 AK304198 AK093847 AX748335	-96458	-	D87078 AF315591 NM_015317 BC112046 BC112048 BC143550 BC143552	-119744	-	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	203971	-	AF522369 NM_182828	219546	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	375976	-	AK312487|RHOB|388|ras homolog gene family, member B##AK124398|RHOB|388|ras homolog gene family, member B##BC066954|RHOB|388|ras homolog gene family, member B##NM_004040|RHOB|388|ras homolog gene family, member B##AK304198|PUM2|23369|pumilio homolog 2 (Drosophila)##AK093847|PUM2|23369|pumilio homolog 2 (Drosophila)##D87078|PUM2|23369|pumilio homolog 2 (Drosophila)##AF315591|PUM2|23369|pumilio homolog 2 (Drosophila)##NM_015317|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112046|PUM2|23369|pumilio homolog 2 (Drosophila)##BC112048|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143550|PUM2|23369|pumilio homolog 2 (Drosophila)##BC143552|PUM2|23369|pumilio homolog 2 (Drosophila)##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43	0.0	
chr22	42095343	42095445	reg1036994.p1	3.656	+	BC035403 NM_001142964 AK131457	-8836	+	AK124020 TSC_hg19_v1_chr22_-_42084824 BC005358 AF155235 NM_001003796	-10529	-	TSC_hg19_v1_chr22_-_42078457 CR456531 BC095439 AK311800 D50420 NM_005008	-16924	-	BC025400 NM_152513 BC035720 BC144638	118	+	TSC_hg19_v1_chr22_+_42196682 NM_024821 AK026002 AK299311 BC017693 CR456484	101278	+	NM_004599 TSC_hg19_v1_chr22_+_42229105	133711	+	BC035403|C22orf46|79640|chromosome 22 open reading frame 46##NM_001142964|C22orf46|79640|chromosome 22 open reading frame 46##AK131457|C22orf46|79640|chromosome 22 open reading frame 46##BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##CR456531|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##BC095439|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##AK311800|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##D50420|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_005008|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##BC025400|MEI1|150365|meiosis inhibitor 1##NM_152513|MEI1|150365|meiosis inhibitor 1##BC035720|MEI1|150365|meiosis inhibitor 1##BC144638|MEI1|150365|meiosis inhibitor 1##NM_024821|CCDC134|79879|coiled-coil domain containing 134##AK026002|CCDC134|79879|coiled-coil domain containing 134##AK299311|CCDC134|79879|coiled-coil domain containing 134##BC017693|CCDC134|79879|coiled-coil domain containing 134##CR456484|CCDC134|79879|coiled-coil domain containing 134##NM_004599|SREBF2|6721|sterol regulatory element binding transcription factor 2	0.0	
chr2	43447231	43447337	reg1031309.p1	3.656	+	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-427533	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-455984	-	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-651387	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	6061	-	TSC_hg19_v1_chr2_-_43453736 BC020369	6446	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	6458	-	CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AK027304|MTA3|57504|metastasis associated 1 family, member 3##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.024383	
chr3	52016597	52016778	reg1037418.p2	3.656	+	TSC_hg19_v1_chr3_+_52009079 NM_015407 AK298086 AK294015 BC002571 AY358201 AK308592 AL050015 EU832336 EU832421	-7595	+	AK096073 NM_001146314 NM_032750	-8042	-	TSC_hg19_v1_chr3_-_52008038 AK296599 BC007234 AK075112 AK298813 BC050650 BC056411 AK298022 AK075034	-8641	-	NM_000666 NM_001198895 NM_001198896 NM_001198897 NM_001198898 TSC_hg19_v1_chr3_+_52017550 AK298274 BC000545 BC003023 D16307 L07548 D14524 BC014112	753	+	TSC_hg19_v1_chr3_-_52029890 BC071663 U49083 U10248 Z49148 BC071909 BC070481	13194	-	TSC_hg19_v1_chr3_-_52029912 BC070190 AK289538 AK311884 D28412	13226	-	NM_015407|ABHD14A|25864|abhydrolase domain containing 14A##AK298086|ABHD14A-ACY1|100526760|ABHD14A-ACY1 readthrough (non-protein coding)##AK294015|ABHD14A-ACY1|100526760|ABHD14A-ACY1 readthrough (non-protein coding)##BC002571|ABHD14A|25864|abhydrolase domain containing 14A##AY358201|ABHD14A|25864|abhydrolase domain containing 14A##AK308592|ABHD14A|25864|abhydrolase domain containing 14A##AL050015|ABHD14A|25864|abhydrolase domain containing 14A##EU832336|ABHD14A|25864|abhydrolase domain containing 14A##EU832421|ABHD14A|25864|abhydrolase domain containing 14A##AK096073|ABHD14B|84836|abhydrolase domain containing 14B##NM_001146314|ABHD14B|84836|abhydrolase domain containing 14B##NM_032750|ABHD14B|84836|abhydrolase domain containing 14B##AK296599|ABHD14B|84836|abhydrolase domain containing 14B##BC007234|ABHD14B|84836|abhydrolase domain containing 14B##AK075112|ABHD14B|84836|abhydrolase domain containing 14B##AK298813|ABHD14B|84836|abhydrolase domain containing 14B##BC050650|ABHD14B|84836|abhydrolase domain containing 14B##BC056411|ABHD14B|84836|abhydrolase domain containing 14B##AK298022|ABHD14B|84836|abhydrolase domain containing 14B##NM_000666|ACY1|95|aminoacylase 1##NM_001198895|ACY1|95|aminoacylase 1##NM_001198896|ACY1|95|aminoacylase 1##NM_001198897|ACY1|95|aminoacylase 1##NM_001198898|ACY1|95|aminoacylase 1##AK298274|ACY1|95|aminoacylase 1##BC000545|ACY1|95|aminoacylase 1##BC003023|ACY1|95|aminoacylase 1##D16307|ACY1|95|aminoacylase 1##L07548|ACY1|95|aminoacylase 1##D14524|ACY1|95|aminoacylase 1##BC014112|ACY1|95|aminoacylase 1##BC071663|RPL29|6159|ribosomal protein L29##U49083|RPL29|6159|ribosomal protein L29##U10248|RPL29|6159|ribosomal protein L29##Z49148|RPL29|6159|ribosomal protein L29##BC071909|RPL29|6159|ribosomal protein L29##BC070481|RPL29|6159|ribosomal protein L29##BC070190|RPL29|6159|ribosomal protein L29##AK289538|RPL29|6159|ribosomal protein L29##AK311884|RPL29|6159|ribosomal protein L29##D28412|RPL29|6159|ribosomal protein L29	0.301672	CTCF.p2:3:0.290
chr7	127144921	127145019	reg1034157.p1	3.656	+	TSC_hg19_v1_chr7_-_127032759 AF218032 NM_176814 AK309674 BC047641	-112212	-	TSC_hg19_v1_chr7_-_126893165 AK290197	-251818	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	-252605	-	AF525417 AK315472 BC078665 TSC_hg19_v1_chr7_-_127225651	80569	-	BC014100 NM_024523 TSC_hg19_v1_chr7_-_127225654	80702	-	NM_001662 TSC_hg19_v1_chr7_+_127228469 AK307297 AK308548 BC033104 M57567 AK297026 AK312107 BC003043 AB528679 AF493884 BT007087	83508	+	AF218032|ZNF800|168850|zinc finger protein 800##NM_176814|ZNF800|168850|zinc finger protein 800##AK309674|ZNF800|168850|zinc finger protein 800##BC047641|ZNF800|168850|zinc finger protein 800##AK290197|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##AF525417|GCC1|79571|GRIP and coiled-coil domain containing 1##AK315472|GCC1|79571|GRIP and coiled-coil domain containing 1##BC078665|GCC1|79571|GRIP and coiled-coil domain containing 1##BC014100|GCC1|79571|GRIP and coiled-coil domain containing 1##NM_024523|GCC1|79571|GRIP and coiled-coil domain containing 1##NM_001662|ARF5|381|ADP-ribosylation factor 5##AK307297|ARF5|381|ADP-ribosylation factor 5##AK308548|ARF5|381|ADP-ribosylation factor 5##BC033104|ARF5|381|ADP-ribosylation factor 5##M57567|ARF5|381|ADP-ribosylation factor 5##AK297026|ARF5|381|ADP-ribosylation factor 5##AK312107|ARF5|381|ADP-ribosylation factor 5##BC003043|ARF5|381|ADP-ribosylation factor 5##AF493884|ARF5|381|ADP-ribosylation factor 5##BT007087|ARF5|381|ADP-ribosylation factor 5	0.015957	
chr10	70865450	70865543	reg1026319.p2	3.655	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	-17612	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	-17660	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-116961	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	18395	+	TSC_hg19_v1_chr10_+_70883933 BX649092 AK315496	18437	+	AK297142 TSC_hg19_v1_chr10_+_70883939	18444	+	D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_002727|SRGN|5552|serglycin##NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BX649092|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK315496|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK297142|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.0	
chr11	64631967	64632147	reg1030190.p1	3.655	+	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	-19968	-	AJ297488 AJ297489 NM_130803 NM_130804	-53292	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	-53863	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	13925	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	14097	-	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	15104	-	AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I##AY007161|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1	0.0	
chr1	246764739	246764822	reg1037431.p2	3.655	+	TSC_hg19_v1_chr1_+_246729853 BX647629 AK074142	-34934	+	TSC_hg19_v1_chr1_+_246729803 AK056563 AL834246	-34975	+	TSC_hg19_v1_chr1_+_246729757 BC036200 BC010228	-35035	+	NM_016002	122597	+	TSC_hg19_v1_chr1_+_246887713 AK075178 BC026185 CU693152 AF151807	122877	+	TSC_hg19_v1_chr1_-_247054277 AL833491	289515	-	BX647629|CNST|163882|consortin, connexin sorting protein##AK074142|CNST|163882|consortin, connexin sorting protein##AK056563|CNST|163882|consortin, connexin sorting protein##AL834246|CNST|163882|consortin, connexin sorting protein##BC036200|CNST|163882|consortin, connexin sorting protein##BC010228|CNST|163882|consortin, connexin sorting protein##NM_016002|SCCPDH|51097|saccharopine dehydrogenase (putative)##AK075178|SCCPDH|51097|saccharopine dehydrogenase (putative)##BC026185|SCCPDH|51097|saccharopine dehydrogenase (putative)##AF151807|SCCPDH|51097|saccharopine dehydrogenase (putative)##AL833491|AHCTF1|25909|AT hook containing transcription factor 1	0.0	
chr16	12895511	12895691	reg1031052.p1	3.655	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-825028	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-836517	+	NM_001130007	-885083	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	2050	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	2118	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	99867	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr20	49145794	49145880	reg1035993.p2	3.655	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	-18832	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-18905	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-18918	+	AK056792 NM_080829	107588	-	TSC_hg19_v1_chr20_-_49308074 AK124347	162240	-	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	202232	+	BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	0.0	
chr2	135809512	135809693	reg1033738.p1	3.655	+	BC137276 BC137277 BC144555 AY574901 AY574902 AY574903 AY574904 AY574905 NM_001018046 NM_025052	-27356	-	TSC_hg19_v1_chr2_+_135676409 AF048732	-133183	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	-133205	+	NM_001172435 NM_012233 TSC_hg19_v1_chr2_+_135809861 AK022494 BC146809 BC071602 D31886 AB385272 AB449877 BC030992	314	+	AK095362 BC089429 NM_032143	479184	-	TSC_hg19_v1_chr2_+_136289050 BC001217 D21852 BC041093 NM_015361	479458	+	BC137276|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##BC137277|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##BC144555|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574901|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574902|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574903|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574904|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AY574905|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##NM_001018046|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##NM_025052|YSK4|80122|YSK4 Sps1/Ste20-related kinase homolog (S. cerevisiae)##AF048732|CCNT2|905|cyclin T2##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2##NM_001172435|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##NM_012233|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AK022494|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC146809|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC071602|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##D31886|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AB449877|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##BC030992|RAB3GAP1|22930|RAB3 GTPase activating protein subunit 1 (catalytic)##AK095362|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##BC089429|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##NM_032143|ZRANB3|84083|zinc finger, RAN-binding domain containing 3##BC001217|R3HDM1|23518|R3H domain containing 1##D21852|R3HDM1|23518|R3H domain containing 1##BC041093|R3HDM1|23518|R3H domain containing 1##NM_015361|R3HDM1|23518|R3H domain containing 1	0.0	
chr3	37493475	37493570	reg1031385.p2	3.655	+	NM_178339 NM_178342 AJ493604 AJ493603	-52508	+	TSC_hg19_v1_chr3_+_37284761 BC045543 NM_001172713 NM_002078 BC050444 AK290550 BC023648 AK300192 AK307429 AB209693 U41740 X82834	-208759	+	TSC_hg19_v1_chr3_-_37217813 BC017703 BC053668 AK291514 NM_001134369 NM_006309 NM_017724	-275735	-	TSC_hg19_v1_chr3_+_37493631 BC030198 D25303 NM_002207 L24158	232	+	TSC_hg19_v1_chr3_+_37903656 AJ575644 AJ575645 NM_001008392 NM_005808 AY279532 AY364238	410144	+	TSC_hg19_v1_chr3_+_38032276 BC004300	538754	+	NM_178339|C3orf35|339883|chromosome 3 open reading frame 35##NM_178342|C3orf35|339883|chromosome 3 open reading frame 35##AJ493604|C3orf35|339883|chromosome 3 open reading frame 35##AJ493603|C3orf35|339883|chromosome 3 open reading frame 35##BC045543|GOLGA4|2803|golgin A4##NM_001172713|GOLGA4|2803|golgin A4##NM_002078|GOLGA4|2803|golgin A4##BC050444|GOLGA4|2803|golgin A4##AK290550|GOLGA4|2803|golgin A4##BC023648|GOLGA4|2803|golgin A4##AK300192|GOLGA4|2803|golgin A4##AK307429|GOLGA4|2803|golgin A4##AB209693|GOLGA4|2803|golgin A4##U41740|GOLGA4|2803|golgin A4##X82834|GOLGA4|2803|golgin A4##BC053668|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##AK291514|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##NM_001134369|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##NM_006309|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##NM_017724|LRRFIP2|9209|leucine rich repeat (in FLII) interacting protein 2##BC030198|ITGA9|3680|integrin, alpha 9##D25303|ITGA9|3680|integrin, alpha 9##NM_002207|ITGA9|3680|integrin, alpha 9##L24158|ITGA9|3680|integrin, alpha 9##AJ575644|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AJ575645|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_001008392|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##NM_005808|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY279532|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##AY364238|CTDSPL|10217|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like##BC004300|VILL|50853|villin-like	0.955271	CTCF.p2:7:0.955
chr4	17616440	17616577	reg1028913.p2	3.655	+	TSC_hg19_v1_chr4_+_17616263 AF318059 AK313928 AF358829 NM_025205 BC011936 AF317680 DQ893391 DQ896713 AF317679 AF317678	-242	+	TSC_hg19_v1_chr4_+_17579121 AK298613 AK307723 AK225511 BC006199 AK298790	-37378	+	TSC_hg19_v1_chr4_+_17579057 BC065564 CR457128 AK022055	-37432	+	AK308144 NM_015688	166626	-	BC050697 TSC_hg19_v1_chr4_-_17806917	190360	-	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	195765	-	AF318059|MED28|80306|mediator complex subunit 28##AK313928|MED28|80306|mediator complex subunit 28##AF358829|MED28|80306|mediator complex subunit 28##NM_025205|MED28|80306|mediator complex subunit 28##BC011936|MED28|80306|mediator complex subunit 28##AF317680|MED28|80306|mediator complex subunit 28##DQ893391|MED28|80306|mediator complex subunit 28##DQ896713|MED28|80306|mediator complex subunit 28##AF317679|MED28|80306|mediator complex subunit 28##AF317678|MED28|80306|mediator complex subunit 28##AK298613|LAP3|51056|leucine aminopeptidase 3##AK307723|LAP3|51056|leucine aminopeptidase 3##AK225511|LAP3|51056|leucine aminopeptidase 3##BC006199|LAP3|51056|leucine aminopeptidase 3##AK298790|LAP3|51056|leucine aminopeptidase 3##BC065564|LAP3|51056|leucine aminopeptidase 3##CR457128|LAP3|51056|leucine aminopeptidase 3##AK022055|LAP3|51056|leucine aminopeptidase 3##AK308144|FAM184B|27146|family with sequence similarity 184, member B##NM_015688|FAM184B|27146|family with sequence similarity 184, member B##BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16	0.0	
chr7	148182740	148182838	reg1035961.p1	3.655	+	TSC_hg19_v1_chr7_+_148036552 CR933671	-146224	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	-2368905	+	NM_014141	-2369337	+	BC021251 NM_145304	104867	+	TSC_hg19_v1_chr7_+_148395994 NM_003592 AK096163 AK296909	213151	+	TSC_hg19_v1_chr7_+_148396012 BX537409	213215	+	CR933671|CNTNAP2|26047|contactin associated protein-like 2##AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##BC021251|C7orf33|202865|chromosome 7 open reading frame 33##NM_145304|C7orf33|202865|chromosome 7 open reading frame 33##NM_003592|CUL1|8454|cullin 1##AK096163|CUL1|8454|cullin 1##AK296909|CUL1|8454|cullin 1##BX537409|CUL1|8454|cullin 1	0.971348	CTCF.p2:33:0.971
chr7	154997280	154997448	reg1041197.p1	3.655	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	-134787	+	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	-202153	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	-202694	-	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	92158	+	AK291675 TSC_hg19_v1_chr7_+_155089667	92280	+	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	253400	+	BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##AK291675|INSIG1|3638|insulin induced gene 1##BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2	0.0	
chr8	88594278	88594401	reg1032470.p1	3.655	+	AK093121 AX747937 BC117326 BC117328 NM_173538	-715666	+	BC150601 AF272900 NM_019098 DQ426865	-838427	-	AK292912 BC007017 BC008385 TSC_hg19_v1_chr8_+_87526694 BC066597 BC036242 AB014536 AF077226	-1067628	+	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	291920	-	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	745407	-	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	2175691	+	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3##AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3##NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3##AK292912|CPNE3|8895|copine III##BC007017|CPNE3|8895|copine III##BC008385|CPNE3|8895|copine III##BC066597|CPNE3|8895|copine III##BC036242|CPNE3|8895|copine III##AB014536|CPNE3|8895|copine III##AF077226|CPNE3|8895|copine III##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2	0.999852	CTCF.p2:-18:1.000
chrX	70401369	70401523	reg1036706.p1	3.655	+	TSC_hg19_v1_chrX_+_70364730 BC051715	-36706	+	TSC_hg19_v1_chrX_+_70364710 AF217411 AX773948 AX773949	-36733	+	NM_001166660 NM_018977 NM_181303 BX641059 TSC_hg19_v1_chrX_+_70364698 BC028738 AK299669	-36757	+	TSC_hg19_v1_chrX_+_70435056 NM_001097642	33608	+	TSC_hg19_v1_chrX_+_70435092 BC039198 X04325	33649	+	NM_000166 BC022426 AK313474 BC002805	41654	+	BC051715|NLGN3|54413|neuroligin 3##AF217411|NLGN3|54413|neuroligin 3##NM_001166660|NLGN3|54413|neuroligin 3##NM_018977|NLGN3|54413|neuroligin 3##NM_181303|NLGN3|54413|neuroligin 3##BX641059|NLGN3|54413|neuroligin 3##BC028738|NLGN3|54413|neuroligin 3##AK299669|NLGN3|54413|neuroligin 3##NM_001097642|GJB1|2705|gap junction protein, beta 1, 32kDa##BC039198|GJB1|2705|gap junction protein, beta 1, 32kDa##X04325|GJB1|2705|gap junction protein, beta 1, 32kDa##NM_000166|GJB1|2705|gap junction protein, beta 1, 32kDa##BC022426|GJB1|2705|gap junction protein, beta 1, 32kDa##AK313474|GJB1|2705|gap junction protein, beta 1, 32kDa##BC002805|GJB1|2705|gap junction protein, beta 1, 32kDa	0.0	
chrX	78235613	78235720	reg1034711.p2	3.655	+	NM_014499 NM_198333 AK313218 AK292138 BC051875	-34794	+	NM_005296 AK314134	-232458	+	AK096184 NM_152694	-320842	-	AF345567 BC104922 BC104924 NM_032553	190802	+	CR456875 CU691874 EU446983 AY359051 AB209310 BC040437 BC010511 TSC_hg19_v1_chrX_-_78622829 AK223327 AK303238 AF038953 BC034485	387117	-	AK313154 NM_001171581 NM_004867	387361	-	NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##AK096184|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_152694|ZCCHC5|203430|zinc finger, CCHC domain containing 5##AF345567|GPR174|84636|G protein-coupled receptor 174##BC104922|GPR174|84636|G protein-coupled receptor 174##BC104924|GPR174|84636|G protein-coupled receptor 174##NM_032553|GPR174|84636|G protein-coupled receptor 174##CR456875|ITM2A|9452|integral membrane protein 2A##EU446983|ITM2A|9452|integral membrane protein 2A##AY359051|ITM2A|9452|integral membrane protein 2A##AB209310|ITM2A|9452|integral membrane protein 2A##BC040437|ITM2A|9452|integral membrane protein 2A##BC010511|ITM2A|9452|integral membrane protein 2A##AK223327|ITM2A|9452|integral membrane protein 2A##AK303238|ITM2A|9452|integral membrane protein 2A##AF038953|ITM2A|9452|integral membrane protein 2A##BC034485|ITM2A|9452|integral membrane protein 2A##AK313154|ITM2A|9452|integral membrane protein 2A##NM_001171581|ITM2A|9452|integral membrane protein 2A##NM_004867|ITM2A|9452|integral membrane protein 2A	0.0	
chr11	129201682	129201754	reg1000768.p1	3.654	+	EF127492 NM_001142685	-139626	-	AB018255 AY194287 TSC_hg19_v1_chr11_-_128894084 AB079856 NM_014715	-307657	-	NM_001195195 NM_001251964 NM_022112	-388425	-	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	44163	+	TSC_hg19_v1_chr11_+_129685744 AK098106 NM_138788 AK290283 AK292058	484026	+	NM_006165 X80878	561185	-	EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##AB018255|ARHGAP32|9743|Rho GTPase activating protein 32##AY194287|ARHGAP32|9743|Rho GTPase activating protein 32##AB079856|ARHGAP32|9743|Rho GTPase activating protein 32##NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001195195|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_001251964|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##NM_022112|TP53AIP1|63970|tumor protein p53 regulated apoptosis inducing protein 1##AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2##AK098106|TMEM45B|120224|transmembrane protein 45B##NM_138788|TMEM45B|120224|transmembrane protein 45B##AK290283|TMEM45B|120224|transmembrane protein 45B##AK292058|TMEM45B|120224|transmembrane protein 45B##NM_006165|NFRKB|4798|nuclear factor related to kappaB binding protein##X80878|NFRKB|4798|nuclear factor related to kappaB binding protein	0.0	
chr13	114004573	114004686	reg1037669.p1	3.654	+	TSC_hg19_v1_chr13_+_113951612 BC093044 BC021288 AK301584 AB463850 DQ892614 DQ895854	-52941	+	TSC_hg19_v1_chr13_+_113951553 AK092398 BC025335	-53083	+	TSC_hg19_v1_chr13_+_113951509 NM_005561	-53142	+	BC062461 TSC_hg19_v1_chr13_-_114018273	13608	-	AB449887 TSC_hg19_v1_chr13_-_114018427 AK300897 BC080640 AK309959 NM_024719	13791	-	TSC_hg19_v1_chr13_-_114103452 BC009755 NM_199162	98825	-	BC093044|LAMP1|3916|lysosomal-associated membrane protein 1##BC021288|LAMP1|3916|lysosomal-associated membrane protein 1##AK301584|LAMP1|3916|lysosomal-associated membrane protein 1##DQ892614|LAMP1|3916|lysosomal-associated membrane protein 1##DQ895854|LAMP1|3916|lysosomal-associated membrane protein 1##AK092398|LAMP1|3916|lysosomal-associated membrane protein 1##BC025335|LAMP1|3916|lysosomal-associated membrane protein 1##NM_005561|LAMP1|3916|lysosomal-associated membrane protein 1##BC062461|GRTP1|79774|growth hormone regulated TBC protein 1##AB449887|GRTP1|79774|growth hormone regulated TBC protein 1##AK300897|GRTP1|79774|growth hormone regulated TBC protein 1##BC080640|GRTP1|79774|growth hormone regulated TBC protein 1##AK309959|GRTP1|79774|growth hormone regulated TBC protein 1##NM_024719|GRTP1|79774|growth hormone regulated TBC protein 1##BC009755|ADPRHL1|113622|ADP-ribosylhydrolase like 1##NM_199162|ADPRHL1|113622|ADP-ribosylhydrolase like 1	0.143192	
chr13	44250766	44250833	reg1036072.p2	3.654	+	BC024178 NM_001127615	-47189	-	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	-653097	+	AF126743 AY248898 NM_013238	-653450	+	TSC_hg19_v1_chr13_-_44361107 BC068521 NM_001242863 NM_017993	110284	-	NM_001128303	202620	+	NM_144974 AK056408	203026	-	BC024178|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001127615|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AF126743|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY248898|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_013238|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC068521|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001242863|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_017993|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122	0.0	
chr17	62198266	62198439	reg1030377.p1	3.654	+	TSC_hg19_v1_chr17_-_62097985 AK295382 AK309953 NM_001099786 NM_001099787 NM_001099788 NM_001099789	-100370	-	NM_000873 TSC_hg19_v1_chr17_-_62084314	-114047	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	-122590	+	TSC_hg19_v1_chr17_-_62207401 AB385116 BC130405 BC130407	9046	-	AF059198 AB209869 TSC_hg19_v1_chr17_-_62207502 NM_001433 AK292403	9164	-	TSC_hg19_v1_chr17_-_62340591 AL832371 BC040521 AL834251 AK091214 AX746854	142234	-	AK295382|ICAM2|3384|intercellular adhesion molecule 2##NM_001099786|ICAM2|3384|intercellular adhesion molecule 2##NM_001099787|ICAM2|3384|intercellular adhesion molecule 2##NM_001099788|ICAM2|3384|intercellular adhesion molecule 2##NM_001099789|ICAM2|3384|intercellular adhesion molecule 2##NM_000873|ICAM2|3384|intercellular adhesion molecule 2##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##BC130405|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##BC130407|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AF059198|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AB209869|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##NM_001433|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AK292403|ERN1|2081|endoplasmic reticulum to nucleus signaling 1##AL832371|TEX2|55852|testis expressed 2##BC040521|TEX2|55852|testis expressed 2##AL834251|TEX2|55852|testis expressed 2##AK091214|TEX2|55852|testis expressed 2	0.464586	CTCF.p2:-39:0.465
chr18	49181657	49181723	reg1025896.p1	3.654	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-457650	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-457978	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-458464	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	684851	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	685423	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2509302	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	0.0	
chr20	17939761	17939849	reg1034394.p1	3.654	+	BC054871 NM_001014977 NM_178477 BC062735	-259207	+	NM_001159495	-265486	+	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	-276922	-	BT007191 AB464237 TSC_hg19_v1_chr20_-_17949155 AK223308 AK001793 AK129505 NM_014426 BC093623 BC093980 BC143274	9409	-	TSC_hg19_v1_chr20_-_17949438 BC002724 BC062638 BC064555 BC073171 AK123903 AK308017 AK296947 BC000100 AF121855 NM_152227	9635	-	TSC_hg19_v1_chr20_+_17949742 AF306686 AK315532 AF306684 AF306685 AK027503 BC016869 NM_052865	9857	+	BC054871|BANF2|140836|barrier to autointegration factor 2##NM_001014977|BANF2|140836|barrier to autointegration factor 2##NM_178477|BANF2|140836|barrier to autointegration factor 2##BC062735|BANF2|140836|barrier to autointegration factor 2##NM_001159495|BANF2|140836|barrier to autointegration factor 2##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BT007191|SNX5|27131|sorting nexin 5##AK223308|SNX5|27131|sorting nexin 5##AK001793|SNX5|27131|sorting nexin 5##AK129505|SNX5|27131|sorting nexin 5##NM_014426|SNX5|27131|sorting nexin 5##BC093623|SNX5|27131|sorting nexin 5##BC093980|SNX5|27131|sorting nexin 5##BC143274|SNX5|27131|sorting nexin 5##BC002724|SNX5|27131|sorting nexin 5##BC062638|SNX5|27131|sorting nexin 5##AK123903|SNX5|27131|sorting nexin 5##AK308017|SNX5|27131|sorting nexin 5##AK296947|SNX5|27131|sorting nexin 5##BC000100|SNX5|27131|sorting nexin 5##AF121855|SNX5|27131|sorting nexin 5##NM_152227|SNX5|27131|sorting nexin 5##AF306686|C20orf72|92667|chromosome 20 open reading frame 72##AK315532|C20orf72|92667|chromosome 20 open reading frame 72##AF306684|C20orf72|92667|chromosome 20 open reading frame 72##AF306685|C20orf72|92667|chromosome 20 open reading frame 72##AK027503|C20orf72|92667|chromosome 20 open reading frame 72##BC016869|C20orf72|92667|chromosome 20 open reading frame 72##NM_052865|C20orf72|92667|chromosome 20 open reading frame 72	0.0	
chr2	12256799	12256865	reg1033995.p2	3.654	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-370057	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-446541	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-573989	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	600421	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	601084	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	601565	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.0	
chr2	96802027	96802093	reg1037072.p1	3.654	+	NM_000682 AB527942 BC133021 BC136537	-20125	-	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	-101366	-	TSC_hg19_v1_chr2_+_96676311 BC015216	-125736	+	BC107126 AJ537600 BC107127 NM_001002036	2113	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	8894	-	TSC_hg19_v1_chr2_-_96811180 BC007771 L11329 NM_004418	9099	-	NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2##BC007771|DUSP2|1844|dual specificity phosphatase 2##L11329|DUSP2|1844|dual specificity phosphatase 2##NM_004418|DUSP2|1844|dual specificity phosphatase 2	0.0	
chr5	49736535	49736663	reg1034655.p2	3.654	+	AF488549 NM_021072	-4040380	-	AF064876 TSC_hg19_v1_chr5_-_45695947	-4040708	-	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	-4927572	+	AK300860 TSC_hg19_v1_chr5_-_49737200 BC059398	600	-	TSC_hg19_v1_chr5_-_49737229 NM_198449	644	-	AK298680 AK314466 BC105789 NM_001178055	225133	+	AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AK300860|EMB|133418|embigin##BC059398|EMB|133418|embigin##NM_198449|EMB|133418|embigin##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	0.0	
chr7	128595248	128595386	reg1034300.p2	3.654	+	EU258898 NM_001098627 DQ995494 AY504946 DQ277634	-14509	+	DQ995493 AY693669 BC004139 BC004201 DQ277633 NM_032643	-17059	+	AK293654 AY693665 AY693668 NM_001098629 NM_001098630 NM_001242452 DQ995492 U51127 AK297083 AY504947 AY693666 AY693667 EU258896	-17281	+	AJ133769 AF145029 TSC_hg19_v1_chr7_-_128694965 AK312580 BC068530	99578	-	TSC_hg19_v1_chr7_-_128695168 BC009923	99831	-	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	99888	-	EU258898|IRF5|3663|interferon regulatory factor 5##NM_001098627|IRF5|3663|interferon regulatory factor 5##DQ995494|IRF5|3663|interferon regulatory factor 5##AY504946|IRF5|3663|interferon regulatory factor 5##DQ277634|IRF5|3663|interferon regulatory factor 5##AY693669|IRF5|3663|interferon regulatory factor 5##BC004139|IRF5|3663|interferon regulatory factor 5##BC004201|IRF5|3663|interferon regulatory factor 5##DQ277633|IRF5|3663|interferon regulatory factor 5##NM_032643|IRF5|3663|interferon regulatory factor 5##AK293654|IRF5|3663|interferon regulatory factor 5##AY693665|IRF5|3663|interferon regulatory factor 5##AY693668|IRF5|3663|interferon regulatory factor 5##NM_001098629|IRF5|3663|interferon regulatory factor 5##NM_001098630|IRF5|3663|interferon regulatory factor 5##NM_001242452|IRF5|3663|interferon regulatory factor 5##DQ995492|IRF5|3663|interferon regulatory factor 5##U51127|IRF5|3663|interferon regulatory factor 5##AK297083|IRF5|3663|interferon regulatory factor 5##AY504947|IRF5|3663|interferon regulatory factor 5##AY693666|IRF5|3663|interferon regulatory factor 5##AY693667|IRF5|3663|interferon regulatory factor 5##EU258896|IRF5|3663|interferon regulatory factor 5##AJ133769|TNPO3|23534|transportin 3##AF145029|TNPO3|23534|transportin 3##AK312580|TNPO3|23534|transportin 3##BC068530|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3	0.0	
chrX	128906746	128906825	reg1021474.p1	3.654	+	AK300954 U90724 NM_003399 BC126174 BC143901	-33809	+	BC021104 NM_017413	-117863	-	TSC_hg19_v1_chrX_+_128674247 AK226116 BC094726 NM_000276 NM_001587 U57627 AK293107 BC130612 BC144106 BC025253 AB384825	-232487	+	TSC_hg19_v1_chrX_+_128913891 NM_018990 AK296665	7102	+	TSC_hg19_v1_chrX_+_128913898 AK314869 AK292023 BC051881 AL049683 AB528892	7199	+	AK001524 BC000035 AB209807 TSC_hg19_v1_chrX_-_128977481 NM_001008222	70640	-	AK300954|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##U90724|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##NM_003399|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC126174|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC143901|XPNPEP2|7512|X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound##BC021104|APLN|8862|apelin##NM_017413|APLN|8862|apelin##AK226116|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC094726|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_000276|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_001587|OCRL|4952|oculocerebrorenal syndrome of Lowe##U57627|OCRL|4952|oculocerebrorenal syndrome of Lowe##AK293107|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC130612|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC144106|OCRL|4952|oculocerebrorenal syndrome of Lowe##BC025253|OCRL|4952|oculocerebrorenal syndrome of Lowe##NM_018990|SASH3|54440|SAM and SH3 domain containing 3##AK296665|SASH3|54440|SAM and SH3 domain containing 3##AK314869|SASH3|54440|SAM and SH3 domain containing 3##AK292023|SASH3|54440|SAM and SH3 domain containing 3##BC051881|SASH3|54440|SAM and SH3 domain containing 3##AL049683|SASH3|54440|SAM and SH3 domain containing 3##AK001524|ZDHHC9|51114|zinc finger, DHHC-type containing 9##BC000035|ZDHHC9|51114|zinc finger, DHHC-type containing 9##AB209807|ZDHHC9|51114|zinc finger, DHHC-type containing 9##NM_001008222|ZDHHC9|51114|zinc finger, DHHC-type containing 9	0.0	
chrX	138796035	138796101	reg1042645.p1	3.654	+	AK302957 AK316416 NM_001099855 NM_001171876	-5714	-	X12556 AK313900 AK296488 NM_001171877 NM_001171878 NM_001171879 NM_005369	-71143	-	BC109214 BC109215 NM_000133 TSC_hg19_v1_chrX_+_138612919 J00137 AB186358 AK292749 FR846238 FR846239 FR846240 J00136 M11309	-183158	+	BC132728 BC132730 AJ580093 AJ580094 NM_001010986 NM_173694	118347	-	BC137148 BC137149 NM_001013403	251608	-	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	791184	-	AK302957|MCF2|4168|MCF.2 cell line derived transforming sequence##AK316416|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001099855|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171876|MCF2|4168|MCF.2 cell line derived transforming sequence##X12556|MCF2|4168|MCF.2 cell line derived transforming sequence##AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence##AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence##BC109214|F9|2158|coagulation factor IX##BC109215|F9|2158|coagulation factor IX##NM_000133|F9|2158|coagulation factor IX##J00137|F9|2158|coagulation factor IX##AB186358|F9|2158|coagulation factor IX##AK292749|F9|2158|coagulation factor IX##FR846238|F9|2158|coagulation factor IX##FR846239|F9|2158|coagulation factor IX##FR846240|F9|2158|coagulation factor IX##J00136|F9|2158|coagulation factor IX##M11309|F9|2158|coagulation factor IX##BC132728|ATP11C|286410|ATPase, class VI, type 11C##BC132730|ATP11C|286410|ATPase, class VI, type 11C##AJ580093|ATP11C|286410|ATPase, class VI, type 11C##AJ580094|ATP11C|286410|ATPase, class VI, type 11C##NM_001010986|ATP11C|286410|ATPase, class VI, type 11C##NM_173694|ATP11C|286410|ATPase, class VI, type 11C##BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3	0.0	
chr1	161038067	161038152	reg1046227.p1	3.653	+	TSC_hg19_v1_chr1_-_161015769 NM_007122 NM_207005	-22342	-	AK314876 BC035505 TSC_hg19_v1_chr1_-_161015745	-22392	-	AF111713 TSC_hg19_v1_chr1_-_161008767 NM_001113205 NM_001113206 NM_001113207 AK299487	-29351	-	TSC_hg19_v1_chr1_-_161039466 AB463226 BC053688 BC025732	1358	-	TSC_hg19_v1_chr1_-_161039608 BC043387	1490	-	TSC_hg19_v1_chr1_-_161039656 BX537846	1548	-	NM_007122|USF1|7391|upstream transcription factor 1##NM_207005|USF1|7391|upstream transcription factor 1##AK314876|USF1|7391|upstream transcription factor 1##BC035505|USF1|7391|upstream transcription factor 1##NM_001113205|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##NM_001113206|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##NM_001113207|TSTD1|100131187|thiosulfate sulfurtransferase (rhodanese)-like domain containing 1##AK299487|F11R|50848|F11 receptor##BC053688|ARHGAP30|257106|Rho GTPase activating protein 30##BC025732|ARHGAP30|257106|Rho GTPase activating protein 30##BC043387|ARHGAP30|257106|Rho GTPase activating protein 30##BX537846|ARHGAP30|257106|Rho GTPase activating protein 30	0.0	
chr11	95918435	95918615	reg1042366.p1	3.653	+	BC052990 BC012086 TSC_hg19_v1_chr11_-_95657272 BC034474 BX647997 NM_001243571 NM_016156 NM_201278 NM_201281 AB028996	-261169	-	AK293243 TSC_hg19_v1_chr11_-_95657092 AK302940 BC040432 AK291277	-261474	-	D42054 BC039711 BC029385 AB385276 AY225092 CU691748 TSC_hg19_v1_chr11_+_95523869	-394685	+	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	157878	-	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	204517	-	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	204649	+	BC052990|MTMR2|8898|myotubularin related protein 2##BC012086|MTMR2|8898|myotubularin related protein 2##BC034474|MTMR2|8898|myotubularin related protein 2##BX647997|MTMR2|8898|myotubularin related protein 2##NM_001243571|MTMR2|8898|myotubularin related protein 2##NM_016156|MTMR2|8898|myotubularin related protein 2##NM_201278|MTMR2|8898|myotubularin related protein 2##NM_201281|MTMR2|8898|myotubularin related protein 2##AB028996|MTMR2|8898|myotubularin related protein 2##AK293243|MTMR2|8898|myotubularin related protein 2##AK302940|MTMR2|8898|myotubularin related protein 2##BC040432|MTMR2|8898|myotubularin related protein 2##AK291277|MTMR2|8898|myotubularin related protein 2##D42054|CEP57|9702|centrosomal protein 57kDa##BC039711|CEP57|9702|centrosomal protein 57kDa##BC029385|CEP57|9702|centrosomal protein 57kDa##AY225092|CEP57|9702|centrosomal protein 57kDa##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)	0.0	
chr12	65996560	65996741	reg1004683.p2	3.653	+	TSC_hg19_v1_chr12_+_65672705 NM_001193461	-323926	+	NM_001031679 NM_001193460 NM_198080 TSC_hg19_v1_chr12_+_65672483 AK316365 AK293084 AK299065 AY358229 BX648776 AL833622 BC040053	-324125	+	TSC_hg19_v1_chr12_+_65563362 AK312473 NM_001167614 NM_014319 AK304317 AF112299	-433296	+	TSC_hg19_v1_chr12_+_66218262 AY601861 AY601862 AY601863 AY601864 AY601865 AY601866 AY601867 NM_003483 NM_003484 U28749 Z31595	221557	+	TSC_hg19_v1_chr12_+_66218605 AK311399	221957	+	TSC_hg19_v1_chr12_+_66218882 JF268496 S80262 GQ272323 AF533652 AF533653 AF533654	222363	+	NM_001193461|MSRB3|253827|methionine sulfoxide reductase B3##NM_001031679|MSRB3|253827|methionine sulfoxide reductase B3##NM_001193460|MSRB3|253827|methionine sulfoxide reductase B3##NM_198080|MSRB3|253827|methionine sulfoxide reductase B3##AK316365|MSRB3|253827|methionine sulfoxide reductase B3##AK293084|MSRB3|253827|methionine sulfoxide reductase B3##AK299065|MSRB3|253827|methionine sulfoxide reductase B3##AY358229|MSRB3|253827|methionine sulfoxide reductase B3##BX648776|MSRB3|253827|methionine sulfoxide reductase B3##AL833622|MSRB3|253827|methionine sulfoxide reductase B3##BC040053|MSRB3|253827|methionine sulfoxide reductase B3##AK312473|LEMD3|23592|LEM domain containing 3##NM_001167614|LEMD3|23592|LEM domain containing 3##NM_014319|LEMD3|23592|LEM domain containing 3##AK304317|LEMD3|23592|LEM domain containing 3##AF112299|LEMD3|23592|LEM domain containing 3##AY601861|HMGA2|8091|high mobility group AT-hook 2##AY601862|HMGA2|8091|high mobility group AT-hook 2##AY601863|HMGA2|8091|high mobility group AT-hook 2##AY601864|HMGA2|8091|high mobility group AT-hook 2##AY601865|HMGA2|8091|high mobility group AT-hook 2##AY601866|HMGA2|8091|high mobility group AT-hook 2##AY601867|HMGA2|8091|high mobility group AT-hook 2##NM_003483|HMGA2|8091|high mobility group AT-hook 2##NM_003484|HMGA2|8091|high mobility group AT-hook 2##U28749|HMGA2|8091|high mobility group AT-hook 2##Z31595|HMGA2|8091|high mobility group AT-hook 2##AK311399|HMGA2|8091|high mobility group AT-hook 2##AF533652|HMGA2|8091|high mobility group AT-hook 2##AF533653|HMGA2|8091|high mobility group AT-hook 2##AF533654|HMGA2|8091|high mobility group AT-hook 2	0.0	
chr14	62129332	62129508	reg1038381.p2	3.653	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-340893	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-380898	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-381226	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	32770	+	FJ790247 NM_001243084	34919	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	99699	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.0	
chr16	23335134	23335206	reg1036658.p2	3.653	+	NM_000336 BC036352 X87159 AK313192	-21543	+	U48936 BC059391 NM_001039 TSC_hg19_v1_chr16_+_23194066	-141118	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	-174621	-	TSC_hg19_v1_chr16_-_23464487 BC000549 BC037563 NM_153603	129325	-	TSC_hg19_v1_chr16_-_23521748 AB384559 CU674130 DQ892534 DQ895745 BC050620 AF165531	186565	-	AF190863 AF323754 AF233522 TSC_hg19_v1_chr16_-_23521769	186592	-	NM_000336|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC036352|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##X87159|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##AK313192|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##U48936|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##BC059391|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_001039|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31##BC000549|COG7|91949|component of oligomeric golgi complex 7##BC037563|COG7|91949|component of oligomeric golgi complex 7##NM_153603|COG7|91949|component of oligomeric golgi complex 7##DQ892534|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##DQ895745|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##BC050620|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF165531|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF190863|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF323754|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF233522|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	0.0	
chr17	62044318	62044473	reg1042500.p2	3.653	+	S52229 S79249 X83539 M80461 BC032651 BC002975 BC030210 AX775815 AX775817 AK222954 AK313583 AK223210 NM_000626 NM_001039933 NM_021602 M89957	-34729	-	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	-48229	-	BC119747 BC029365 NM_001318 NM_022579 NM_022580 NM_022581 AX772828	-55738	-	AY212253 M81758 NM_000334	5843	-	AK021786 AK294360 AK302960 AK304254 NM_001164257 NM_001191029 NM_001191030 NM_001191031 BC030709 BC045676	31367	+	NM_000873 TSC_hg19_v1_chr17_-_62084314	39910	-	S52229|CD79B|974|CD79b molecule, immunoglobulin-associated beta##S79249|CD79B|974|CD79b molecule, immunoglobulin-associated beta##X83539|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M80461|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC032651|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC002975|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC030210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775815|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775817|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK222954|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK313583|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK223210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_000626|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_001039933|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_021602|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M89957|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1##BC119747|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BC029365|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_001318|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022579|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022580|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022581|CSHL1|1444|chorionic somatomammotropin hormone-like 1##AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##AK021786|C17orf72|92340|chromosome 17 open reading frame 72##AK294360|C17orf72|92340|chromosome 17 open reading frame 72##AK302960|C17orf72|92340|chromosome 17 open reading frame 72##AK304254|C17orf72|92340|chromosome 17 open reading frame 72##NM_001164257|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191029|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191030|C17orf72|92340|chromosome 17 open reading frame 72##NM_001191031|C17orf72|92340|chromosome 17 open reading frame 72##BC030709|C17orf72|92340|chromosome 17 open reading frame 72##BC045676|C17orf72|92340|chromosome 17 open reading frame 72##NM_000873|ICAM2|3384|intercellular adhesion molecule 2	0.0	
chr3	171994071	171994170	reg1031461.p1	3.653	+	TSC_hg19_v1_chr3_+_171758320 AK314478 NM_001135095 BX648340 AB098597	-235783	+	TSC_hg19_v1_chr3_+_171757442 AY358367	-236662	+	TSC_hg19_v1_chr3_+_171757437 AK127826	-236686	+	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	172103	-	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	247058	-	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	434770	-	AK314478|FNDC3B|64778|fibronectin type III domain containing 3B##NM_001135095|FNDC3B|64778|fibronectin type III domain containing 3B##BX648340|FNDC3B|64778|fibronectin type III domain containing 3B##AB098597|FNDC3B|64778|fibronectin type III domain containing 3B##AY358367|FNDC3B|64778|fibronectin type III domain containing 3B##AK127826|FNDC3B|64778|fibronectin type III domain containing 3B##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1	0.07112	
chr3	44904464	44904549	reg1038744.p2	3.653	+	TSC_hg19_v1_chr3_+_44903403 AL834253 BC019851 NM_144638	-1115	+	TSC_hg19_v1_chr3_+_44803285 AB035898 AK307674 BC117174 BC143752	-101193	+	NM_020242 TSC_hg19_v1_chr3_+_44803265	-101269	+	NM_003241 AK125536 AK312936 AK300523 BC007003 L34840 U31905 U79008 Y09559 CU675487 DQ896505 EU176444	11627	+	BC015467 TSC_hg19_v1_chr3_-_45017670 AF247703 NM_001135179 NM_016598	113135	-	TSC_hg19_v1_chr3_+_45017742 AK315741 NM_015004 AK295779	113231	+	AL834253|TMEM42|131616|transmembrane protein 42##BC019851|TMEM42|131616|transmembrane protein 42##NM_144638|TMEM42|131616|transmembrane protein 42##AB035898|KIF15|56992|kinesin family member 15##AK307674|KIF15|56992|kinesin family member 15##BC117174|KIF15|56992|kinesin family member 15##BC143752|KIF15|56992|kinesin family member 15##NM_020242|KIF15|56992|kinesin family member 15##NM_003241|TGM4|7047|transglutaminase 4 (prostate)##AK125536|TGM4|7047|transglutaminase 4 (prostate)##AK312936|TGM4|7047|transglutaminase 4 (prostate)##AK300523|TGM4|7047|transglutaminase 4 (prostate)##BC007003|TGM4|7047|transglutaminase 4 (prostate)##L34840|TGM4|7047|transglutaminase 4 (prostate)##U31905|TGM4|7047|transglutaminase 4 (prostate)##U79008|TGM4|7047|transglutaminase 4 (prostate)##Y09559|TGM4|7047|transglutaminase 4 (prostate)##DQ896505|TGM4|7047|transglutaminase 4 (prostate)##EU176444|TGM4|7047|transglutaminase 4 (prostate)##BC015467|ZDHHC3|51304|zinc finger, DHHC-type containing 3##AF247703|ZDHHC3|51304|zinc finger, DHHC-type containing 3##NM_001135179|ZDHHC3|51304|zinc finger, DHHC-type containing 3##NM_016598|ZDHHC3|51304|zinc finger, DHHC-type containing 3##AK315741|EXOSC7|23016|exosome component 7##NM_015004|EXOSC7|23016|exosome component 7##AK295779|EXOSC7|23016|exosome component 7	0.0	
chr3	59437107	59437205	reg1029342.p1	3.653	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-401396	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-401415	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-401448	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	1799934	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	2110055	+	BC047734 TSC_hg19_v1_chr3_+_61547294	2110130	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.0	
chr4	106817416	106817495	reg1033723.p1	3.653	+	TSC_hg19_v1_chr4_+_106816634 AK290029 AK304721 AL832465 BC131587	-765	+	TSC_hg19_v1_chr4_+_106816593 AK295772 NM_001033047 NM_001184690 NM_001184691 NM_001184692 NM_001184693 AK302477 AK304279 AY358336	-854	+	AK292355 BC032942 NM_001031720	-185488	+	NM_001142415 AK297950 AK095951 NM_004757	419354	+	TSC_hg19_v1_chr4_-_107237383 BC068496 AK315571 BX647851 BC009208 NM_001163435 NM_001163437 NM_033115	419930	-	AK303965 NM_001142416 TSC_hg19_v1_chr4_+_107237695	420224	+	AK290029|NPNT|255743|nephronectin##AK304721|NPNT|255743|nephronectin##AL832465|NPNT|255743|nephronectin##BC131587|NPNT|255743|nephronectin##AK295772|NPNT|255743|nephronectin##NM_001033047|NPNT|255743|nephronectin##NM_001184690|NPNT|255743|nephronectin##NM_001184691|NPNT|255743|nephronectin##NM_001184692|NPNT|255743|nephronectin##NM_001184693|NPNT|255743|nephronectin##AK302477|NPNT|255743|nephronectin##AK304279|NPNT|255743|nephronectin##AY358336|NPNT|255743|nephronectin##AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001142415|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##AK297950|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##AK095951|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_004757|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##BC068496|TBCK|93627|TBC1 domain containing kinase##AK315571|TBCK|93627|TBC1 domain containing kinase##BX647851|TBCK|93627|TBC1 domain containing kinase##BC009208|TBCK|93627|TBC1 domain containing kinase##NM_001163435|TBCK|93627|TBC1 domain containing kinase##NM_001163437|TBCK|93627|TBC1 domain containing kinase##NM_033115|TBCK|93627|TBC1 domain containing kinase##AK303965|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_001142416|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	0.0	
chr6	43427414	43427506	reg1036532.p1	3.653	+	BC000230 BC006425 NM_206539	-3675	-	AY358126 NM_023932 BC110320	-4188	-	AY032599 NM_033450	-27972	+	TSC_hg19_v1_chr6_+_43445303 NM_001146016 NM_001146018 NM_001146019 NM_001146020 NM_080604	17819	+	TSC_hg19_v1_chr6_+_43445304 AK225787 AK309119	17846	+	TSC_hg19_v1_chr6_+_43445314 AK024269 AK123398	17853	+	BC000230|DLK2|65989|delta-like 2 homolog (Drosophila)##BC006425|DLK2|65989|delta-like 2 homolog (Drosophila)##NM_206539|DLK2|65989|delta-like 2 homolog (Drosophila)##AY358126|DLK2|65989|delta-like 2 homolog (Drosophila)##NM_023932|DLK2|65989|delta-like 2 homolog (Drosophila)##BC110320|DLK2|65989|delta-like 2 homolog (Drosophila)##AY032599|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_033450|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_001146016|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_001146018|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_001146019|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_001146020|TJAP1|93643|tight junction associated protein 1 (peripheral)##NM_080604|TJAP1|93643|tight junction associated protein 1 (peripheral)##AK225787|TJAP1|93643|tight junction associated protein 1 (peripheral)##AK309119|TJAP1|93643|tight junction associated protein 1 (peripheral)##AK024269|TJAP1|93643|tight junction associated protein 1 (peripheral)##AK123398|TJAP1|93643|tight junction associated protein 1 (peripheral)	0.473169	CTCF.p2:-4:0.473
chr6_mann_hap4	1799659	1799726	reg1036746.p1	3.653	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.076566	
chr7	6296745	6296926	reg1028420.p2	3.653	+	TSC_hg19_v1_chr7_+_6144605 AK022759 AY618868 BC060846 AK309375	-152237	+	TSC_hg19_v1_chr7_+_6144564 NM_032172 AK298164	-152292	+	TSC_hg19_v1_chr7_-_6098822 NM_001134335 NM_014413	-197988	-	AB528964 DQ891736 DQ894912 EU176610 AJ223957 TSC_hg19_v1_chr7_-_6312242 AJ005197 NM_004227 AK313728 BC028717	15396	-	TSC_hg19_v1_chr7_-_6388581 AK311878 AF533707 BC006110 NM_001037163 BC142977	91675	-	TSC_hg19_v1_chr7_+_6414179 NM_006908 NM_018890 AK054993 BC107748 AK291806 AB209410 BC050687 AK291815 AY279384 BC004247 AB451238 AB451363 AB464133 AF136373 AF498964 AJ132694 BT007121 CU690768 EU831965 EU832058 EU832640 EU832717 M29870 M31467	117392	+	AK022759|USP42|84132|ubiquitin specific peptidase 42##AY618868|USP42|84132|ubiquitin specific peptidase 42##BC060846|USP42|84132|ubiquitin specific peptidase 42##AK309375|USP42|84132|ubiquitin specific peptidase 42##NM_032172|USP42|84132|ubiquitin specific peptidase 42##AK298164|USP42|84132|ubiquitin specific peptidase 42##NM_001134335|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##NM_014413|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##DQ891736|CYTH3|9265|cytohesin 3##DQ894912|CYTH3|9265|cytohesin 3##EU176610|CYTH3|9265|cytohesin 3##AJ223957|CYTH3|9265|cytohesin 3##AJ005197|CYTH3|9265|cytohesin 3##NM_004227|CYTH3|9265|cytohesin 3##AK313728|CYTH3|9265|cytohesin 3##BC028717|CYTH3|9265|cytohesin 3##AK311878|C7orf70|84792|chromosome 7 open reading frame 70##AF533707|C7orf70|84792|chromosome 7 open reading frame 70##BC006110|C7orf70|84792|chromosome 7 open reading frame 70##NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70##BC142977|C7orf70|84792|chromosome 7 open reading frame 70##NM_006908|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##NM_018890|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK054993|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC107748|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291806|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB209410|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC050687|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291815|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AY279384|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC004247|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451238|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451363|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF136373|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF498964|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AJ132694|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BT007121|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU831965|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832058|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832640|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832717|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M29870|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M31467|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	0.0	
chr8	24245027	24245208	reg1007690.p1	3.653	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	-3210	+	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	-93510	+	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	-532806	-	BC058037 AK292492 NM_003817 AF215824 CU691292 AB527100	53414	+	TSC_hg19_v1_chr8_+_24771273 AK296226 BC071752 EF560736 NM_005382	526154	+	EF560737 TSC_hg19_v1_chr8_+_24771276 BC096757 GQ129242 GQ129243 AB527839	526174	+	NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1##BC058037|ADAM7|8756|ADAM metallopeptidase domain 7##AK292492|ADAM7|8756|ADAM metallopeptidase domain 7##NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7##AF215824|ADAM7|8756|ADAM metallopeptidase domain 7##AK296226|NEFM|4741|neurofilament, medium polypeptide##BC071752|NEFM|4741|neurofilament, medium polypeptide##EF560736|NEFM|4741|neurofilament, medium polypeptide##NM_005382|NEFM|4741|neurofilament, medium polypeptide##EF560737|NEFM|4741|neurofilament, medium polypeptide##BC096757|NEFM|4741|neurofilament, medium polypeptide##GQ129242|NEFM|4741|neurofilament, medium polypeptide##GQ129243|NEFM|4741|neurofilament, medium polypeptide	0.0	
chr9	116350122	116350233	reg1030927.p2	3.653	+	U27655 AK125094 TSC_hg19_v1_chr9_+_116343207	-6989	+	AF006609 NM_021106	-7238	+	TSC_hg19_v1_chr9_+_116327336 AK289666 AK301515 AK310705 NM_134427	-22845	+	AF490838 NM_144489 AK054584	6033	+	TSC_hg19_v1_chr9_+_116356408 BC018072 BC019039 CU676160	6304	+	TSC_hg19_v1_chr9_+_116638585 BC036039 NM_133374 BC136287 BC143826 AK126896 BC053892	288422	+	U27655|RGS3|5998|regulator of G-protein signaling 3##AK125094|RGS3|5998|regulator of G-protein signaling 3##AF006609|RGS3|5998|regulator of G-protein signaling 3##NM_021106|RGS3|5998|regulator of G-protein signaling 3##AK289666|RGS3|5998|regulator of G-protein signaling 3##AK301515|RGS3|5998|regulator of G-protein signaling 3##AK310705|RGS3|5998|regulator of G-protein signaling 3##NM_134427|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3##BC018072|RGS3|5998|regulator of G-protein signaling 3##BC019039|RGS3|5998|regulator of G-protein signaling 3##BC036039|ZNF618|114991|zinc finger protein 618##NM_133374|ZNF618|114991|zinc finger protein 618##BC136287|ZNF618|114991|zinc finger protein 618##BC143826|ZNF618|114991|zinc finger protein 618##AK126896|ZNF618|114991|zinc finger protein 618##BC053892|ZNF618|114991|zinc finger protein 618	1.016265	CTCF.p2:0:0.713	CTCF.p2:33:0.303
chrX	77851700	77851840	reg1018731.p2	3.653	+	BC035750 DQ131801 DQ131800 AK023929 DQ131802 NM_006639 AK313643 DQ131799	-268687	-	AB529179 DQ891928 DQ895115 BC071649 TSC_hg19_v1_chrX_-_77395133 AF220509 BC009566 AK312579 BC010350 BC146952 BC146960 NM_015975	-456627	-	AB062432 TSC_hg19_v1_chrX_+_77359778 BC104837 BC113568 BC023234 AY423725 AB385546 CR456716 HQ258236	-491968	+	AK096184 NM_152694	63054	-	NM_005296 AK314134	151438	+	NM_014499 NM_198333 AK313218 AK292138 BC051875	349102	+	BC035750|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131801|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131800|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK023929|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131802|CYSLTR1|10800|cysteinyl leukotriene receptor 1##NM_006639|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK313643|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131799|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ891928|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##DQ895115|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC071649|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AF220509|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC009566|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AK312579|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC010350|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146952|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146960|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##NM_015975|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AB062432|PGK1|5230|phosphoglycerate kinase 1##BC104837|PGK1|5230|phosphoglycerate kinase 1##BC113568|PGK1|5230|phosphoglycerate kinase 1##BC023234|PGK1|5230|phosphoglycerate kinase 1##AY423725|PGK1|5230|phosphoglycerate kinase 1##CR456716|PGK1|5230|phosphoglycerate kinase 1##HQ258236|PGK1|5230|phosphoglycerate kinase 1##AK096184|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_152694|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4##NM_014499|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##NM_198333|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK313218|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##AK292138|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10##BC051875|P2RY10|27334|purinergic receptor P2Y, G-protein coupled, 10	0.0	
chr10	21785705	21785790	reg1034995.p2	3.652	+	TSC_hg19_v1_chr10_-_21463021 BC126132 BC126134 BC144201 AJ580772 NM_001173484 NM_213569	-322680	-	AB209311 TSC_hg19_v1_chr10_-_21462987	-322760	-	BC140744 BC144447 NM_001010896 NM_001177483	-350260	-	BC130594 BC132974 TSC_hg19_v1_chr10_-_21785960	185	-	TSC_hg19_v1_chr10_-_21786190 BC040880	444	-	TSC_hg19_v1_chr10_-_21786207 NM_001010911	478	-	BC126132|NEBL|10529|nebulette##BC126134|NEBL|10529|nebulette##BC144201|NEBL|10529|nebulette##AJ580772|NEBL|10529|nebulette##NM_001173484|NEBL|10529|nebulette##NM_213569|NEBL|10529|nebulette##AB209311|NEBL|10529|nebulette##BC140744|C10orf113|387638|chromosome 10 open reading frame 113##BC144447|C10orf113|387638|chromosome 10 open reading frame 113##NM_001010896|C10orf113|387638|chromosome 10 open reading frame 113##NM_001177483|C10orf113|387638|chromosome 10 open reading frame 113##BC130594|C10orf114|399726|chromosome 10 open reading frame 114##BC132974|C10orf114|399726|chromosome 10 open reading frame 114##BC040880|C10orf114|399726|chromosome 10 open reading frame 114##NM_001010911|C10orf114|399726|chromosome 10 open reading frame 114	0.024799	
chr11	16010233	16010398	reg1035170.p1	3.652	+	AB236158 NM_001042536	-873832	+	AB236159 NM_001031853	-876346	+	BC008428 AK291188 BC092468 NM_000728	-915189	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	414086	-	BC037866 NM_001145811	420112	-	AF309034 NM_033326	487610	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	0.600951	CTCF.p2:9:0.601
chr1	156897713	156897827	reg1032276.p1	3.652	+	AK292342 NM_144702 BC033790	-7338	+	NM_001080471	-34248	+	M23102 TSC_hg19_v1_chr1_+_156830655 BC136554 BC144239 NM_001012331 NM_002529 AK290759 AK312704 BC062580	-67104	+	BC057394 NM_014784 NM_198236	117391	-	AK131392 NM_001004341	171829	-	TSC_hg19_v1_chr1_-_157108158 L16464	210380	-	AK292342|LRRC71|149499|leucine rich repeat containing 71##NM_144702|LRRC71|149499|leucine rich repeat containing 71##BC033790|LRRC71|149499|leucine rich repeat containing 71##NM_001080471|PEAR1|375033|platelet endothelial aggregation receptor 1##M23102|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC136554|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC144239|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_001012331|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##NM_002529|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK290759|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##AK312704|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC062580|NTRK1|4914|neurotrophic tyrosine kinase, receptor, type 1##BC057394|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_014784|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##NM_198236|ARHGEF11|9826|Rho guanine nucleotide exchange factor (GEF) 11##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##L16464|ETV3|2117|ets variant 3	0.560133	CTCF.p2:-7:0.530
chr1	230259517	230259626	reg1033566.p2	3.652	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	-56575	+	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	-56629	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-497557	+	BC150638 NM_024554	253819	-	TSC_hg19_v1_chr1_+_230778205 NM_001145036 NM_007357	518625	+	TSC_hg19_v1_chr1_+_230778250 AL832190 BC014960 AK302791	518662	+	AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5##NM_001145036|COG2|22796|component of oligomeric golgi complex 2##NM_007357|COG2|22796|component of oligomeric golgi complex 2##AL832190|COG2|22796|component of oligomeric golgi complex 2##BC014960|COG2|22796|component of oligomeric golgi complex 2##AK302791|COG2|22796|component of oligomeric golgi complex 2	0.0	
chr13	44871991	44872062	reg1033081.p2	3.652	+	AK096044 NM_153218 TSC_hg19_v1_chr13_+_44453986 BC035749	-418020	+	NM_144974 AK056408	-418201	-	NM_001128303	-418607	+	BC029067 NM_001010897 TSC_hg19_v1_chr13_+_44947983	75956	+	U35048 TSC_hg19_v1_chr13_-_45010962 AJ222700 BC105277 BC069207	138926	-	BC146664 BC146679 TSC_hg19_v1_chr13_-_45010983 BC000456 BC016867	138953	-	AK096044|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_153218|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC035749|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##NM_144974|CCDC122|160857|coiled-coil domain containing 122##AK056408|CCDC122|160857|coiled-coil domain containing 122##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1##BC029067|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##NM_001010897|SERP2|387923|stress-associated endoplasmic reticulum protein family member 2##U35048|TSC22D1|8848|TSC22 domain family, member 1##AJ222700|TSC22D1|8848|TSC22 domain family, member 1##BC105277|TSC22D1|8848|TSC22 domain family, member 1##BC069207|TSC22D1|8848|TSC22 domain family, member 1##BC146664|TSC22D1|8848|TSC22 domain family, member 1##BC146679|TSC22D1|8848|TSC22 domain family, member 1##BC000456|TSC22D1|8848|TSC22 domain family, member 1##BC016867|TSC22D1|8848|TSC22 domain family, member 1	0.0	
chr15	59590440	59590532	reg1023518.p1	3.652	+	AY642121 BC022034 AY009108 NM_033195 AK312777 AK058192	-91434	+	TSC_hg19_v1_chr15_+_59397344 NM_004701 AK001404 AL080146 BC105086 BC105112 AF087910 AK222611 AB020981 AF002822 AB587333 AM393577 BT019458 CR533527	-193115	+	TSC_hg19_v1_chr15_+_59359061 AK095327	-231408	+	AB290177 TSC_hg19_v1_chr15_-_59665055	74568	-	TSC_hg19_v1_chr15_-_59665065 AK291688	74580	-	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	74584	-	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B##BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_004701|CCNB2|9133|cyclin B2##AK001404|CCNB2|9133|cyclin B2##AL080146|CCNB2|9133|cyclin B2##BC105086|CCNB2|9133|cyclin B2##BC105112|CCNB2|9133|cyclin B2##AF087910|CCNB2|9133|cyclin B2##AK222611|CCNB2|9133|cyclin B2##AB020981|CCNB2|9133|cyclin B2##AF002822|CCNB2|9133|cyclin B2##AM393577|CCNB2|9133|cyclin B2##BT019458|CCNB2|9133|cyclin B2##CR533527|CCNB2|9133|cyclin B2##AK095327|RNF111|54778|ring finger protein 111##AB290177|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE	0.0	
chr16	70453237	70453340	reg1039644.p1	3.652	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-72460	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-120140	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-120212	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	19693	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	35211	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	49552	+	AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##AK096727|FUK|197258|fucokinase	0.0	
chr18	58475772	58475863	reg1036570.p1	3.652	+	AK314130 NM_005912	-435817	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-908588	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-1111167	-	AF217289 BC101047 BC101048 BC101049 NM_031891	681957	+	AK096495 NM_173557	1084486	-	AF109219 TSC_hg19_v1_chr18_-_59854208	1378377	-	AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.993445	CTCF.p2:2:0.993
chr2	224806621	224806705	reg1042101.p2	3.652	+	TSC_hg19_v1_chr2_-_224702300 BC009606 NM_001039569	-104353	-	AF393369 BC021898 TSC_hg19_v1_chr2_-_224702284 AK025338 AK299026	-104414	-	TSC_hg19_v1_chr2_-_224467145 NM_003469	-339484	-	TSC_hg19_v1_chr2_-_224810010 AF411977 AB527455 CU691898	3330	-	BC040525 AB037856 TSC_hg19_v1_chr2_-_224810016	3352	-	TSC_hg19_v1_chr2_-_224810020 AK023415 AK022888	3361	-	BC009606|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##NM_001039569|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AF393369|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##BC021898|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK025338|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##AK299026|AP1S3|130340|adaptor-related protein complex 1, sigma 3 subunit##NM_003469|SCG2|7857|secretogranin II##AF411977|WDFY1|57590|WD repeat and FYVE domain containing 1##BC040525|WDFY1|57590|WD repeat and FYVE domain containing 1##AB037856|WDFY1|57590|WD repeat and FYVE domain containing 1##AK023415|WDFY1|57590|WD repeat and FYVE domain containing 1##AK022888|WDFY1|57590|WD repeat and FYVE domain containing 1	0.0	
chr5	117842433	117842539	reg1040229.p2	3.652	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-1931972	-	TSC_hg19_v1_chr5_+_115898220 D28352	-1944262	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-2421765	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	481752	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	564325	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	564679	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.274386	CTCF.p2:64:0.274
chr6	43138684	43138798	reg1030036.p1	3.652	+	TSC_hg19_v1_chr6_+_43044048 NM_002821 NM_152880 NM_152881 NM_152882 U33635 BC071557 BC002377 BC014626 AK292589 AF531868 AF531869 AF531870 AF531871 AF531872 U40271 AB209350 AK291016	-94664	+	NM_201522 AK127894	-110503	+	AK094102 NM_201523 AK055293 BX640717	-111111	+	NM_003131 TSC_hg19_v1_chr6_+_43139027 BC052572 J03161	312	+	TSC_hg19_v1_chr6_+_43139192 BC048211	452	+	TSC_hg19_v1_chr6_+_43139204 AB209128 AB464198	552	+	NM_002821|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152880|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152881|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_152882|PTK7|5754|PTK7 protein tyrosine kinase 7##U33635|PTK7|5754|PTK7 protein tyrosine kinase 7##BC071557|PTK7|5754|PTK7 protein tyrosine kinase 7##BC002377|PTK7|5754|PTK7 protein tyrosine kinase 7##BC014626|PTK7|5754|PTK7 protein tyrosine kinase 7##AK292589|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531868|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531869|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531870|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531871|PTK7|5754|PTK7 protein tyrosine kinase 7##AF531872|PTK7|5754|PTK7 protein tyrosine kinase 7##U40271|PTK7|5754|PTK7 protein tyrosine kinase 7##AB209350|PTK7|5754|PTK7 protein tyrosine kinase 7##AK291016|PTK7|5754|PTK7 protein tyrosine kinase 7##NM_201522|KLC4|89953|kinesin light chain 4##AK127894|KLC4|89953|kinesin light chain 4##AK094102|KLC4|89953|kinesin light chain 4##NM_201523|KLC4|89953|kinesin light chain 4##AK055293|KLC4|89953|kinesin light chain 4##BX640717|KLC4|89953|kinesin light chain 4##NM_003131|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC052572|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##J03161|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##BC048211|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)##AB209128|SRF|6722|serum response factor (c-fos serum response element-binding transcription factor)	0.0	
chr9	124457847	124457946	reg1040753.p1	3.652	+	NM_032552	-128498	+	AF378121 AF378122 AF378123 TSC_hg19_v1_chr9_-_124262101 BC045756	-195807	-	BC010703 TSC_hg19_v1_chr9_-_124132529 AK307999 AK304449 AK304518 AK302977 NM_004099 NM_198194	-325354	-	TSC_hg19_v1_chr9_+_124461442 AF367051	3610	+	AY032952 NM_138709	47167	+	TSC_hg19_v1_chr9_-_124855560 AK125178	397692	-	NM_032552|DAB2IP|153090|DAB2 interacting protein##AF378121|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378122|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378123|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC045756|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC010703|STOM|2040|stomatin##AK307999|STOM|2040|stomatin##AK304449|STOM|2040|stomatin##AK304518|STOM|2040|stomatin##AK302977|STOM|2040|stomatin##NM_004099|STOM|2040|stomatin##NM_198194|STOM|2040|stomatin##AF367051|DAB2IP|153090|DAB2 interacting protein##AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11	0.989231	CTCF.p2:0:0.989
chr10	98504147	98504327	reg1015533.p2	3.651	+	BX648550 TSC_hg19_v1_chr10_-_98480272 AK125635 NM_152309	-23996	-	TSC_hg19_v1_chr10_-_98346798 AF269150 BC136788 BC136789 BC144412 NM_020123	-157414	-	TSC_hg19_v1_chr10_-_98346770 AK314348	-157459	-	TSC_hg19_v1_chr10_+_98592020 NM_001170765 NM_001170766 AL832106 AK308356 BC053359	87816	+	TSC_hg19_v1_chr10_-_98592186 AB593180	87963	-	TSC_hg19_v1_chr10_+_98592758 NM_032440 AL834245 AB058698	88491	+	BX648550|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AK125635|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##NM_152309|PIK3AP1|118788|phosphoinositide-3-kinase adaptor protein 1##AF269150|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136788|TM9SF3|56889|transmembrane 9 superfamily member 3##BC136789|TM9SF3|56889|transmembrane 9 superfamily member 3##BC144412|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_020123|TM9SF3|56889|transmembrane 9 superfamily member 3##AK314348|TM9SF3|56889|transmembrane 9 superfamily member 3##NM_001170765|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_001170766|LCOR|84458|ligand dependent nuclear receptor corepressor##AL832106|LCOR|84458|ligand dependent nuclear receptor corepressor##BC053359|LCOR|84458|ligand dependent nuclear receptor corepressor##NM_032440|LCOR|84458|ligand dependent nuclear receptor corepressor##AL834245|LCOR|84458|ligand dependent nuclear receptor corepressor##AB058698|LCOR|84458|ligand dependent nuclear receptor corepressor	0.0	
chr11	26673954	26674020	reg1037331.p2	3.651	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	-80247	-	NM_031418 AK302659	-320257	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-2155338	+	BC049207 NM_178498	69572	-	NM_203371 TSC_hg19_v1_chr11_+_27015658	341655	+	TSC_hg19_v1_chr11_+_27015673 AK310616	341683	+	AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_203371|FIBIN|387758|fin bud initiation factor homolog (zebrafish)	0.0	
chr12	104892220	104892400	reg1029977.p2	3.651	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-41223	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-41502	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-41539	+	TSC_hg19_v1_chr12_+_105153261 AF131762	260967	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	429953	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	487780	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.0	
chr1	234747138	234747275	reg1023673.p1	3.651	+	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-1960	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-3348	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-3375	-	TSC_hg19_v1_chr1_-_234895746 AF193050	148568	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	544883	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	545025	-	BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.0	
chr12	4245551	4245648	reg1024283.p2	3.651	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-263099	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-383217	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-383331	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	137445	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	184792	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	243201	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.0	
chr13	28638968	28639148	reg1036394.p1	3.651	+	NM_001105577	-76285	-	TSC_hg19_v1_chr13_-_28543453 Y13709	-95595	-	TSC_hg19_v1_chr13_-_28543325 BC014461 NM_001265	-95750	-	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	35629	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	73608	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	430186	-	NM_001105577|PRHOXNB|646625|parahox cluster neighbor##Y13709|CDX2|1045|caudal type homeobox 2##BC014461|CDX2|1045|caudal type homeobox 2##NM_001265|CDX2|1045|caudal type homeobox 2##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)	0.906968	CTCF.p2:58:0.907
chr14	100542460	100542528	reg1022865.p1	3.651	+	TSC_hg19_v1_chr14_+_100531768 AF087843 BC032358 AF052504	-10699	+	TSC_hg19_v1_chr14_+_100531758 NM_016337 AK301379	-10742	+	AK295919 TSC_hg19_v1_chr14_+_100485800	-56735	+	AF131766 TSC_hg19_v1_chr14_+_100563847	21339	+	AY541700 BC063598 TSC_hg19_v1_chr14_-_100626009 NM_206918	83477	-	NM_003403 TSC_hg19_v1_chr14_+_100705177	162648	+	AF087843|EVL|51466|Enah/Vasp-like##BC032358|EVL|51466|Enah/Vasp-like##AF052504|EVL|51466|Enah/Vasp-like##NM_016337|EVL|51466|Enah/Vasp-like##AK301379|EVL|51466|Enah/Vasp-like##AK295919|EVL|51466|Enah/Vasp-like##AF131766|EVL|51466|Enah/Vasp-like##AY541700|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##BC063598|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##NM_206918|DEGS2|123099|delta(4)-desaturase, sphingolipid 2##NM_003403|YY1|7528|YY1 transcription factor	0.0	
chr1	43686967	43687147	reg1041686.p1	3.651	+	TSC_hg19_v1_chr1_-_43637988 AK299476 AK295006 NM_006824 AB590504 NM_001159936	-48953	-	NM_001167965 NM_001195831 NM_152498 AK056562 TSC_hg19_v1_chr1_+_43638044 BC117280 BC117306 BC143804	-49011	+	TSC_hg19_v1_chr1_-_43637958 AK223455	-49095	-	NM_144626 BC072393	48622	+	TSC_hg19_v1_chr1_-_43736601 BC073924	49546	-	BC041633 NM_182517 NM_001164829	64205	-	AK299476|EBNA1BP2|10969|EBNA1 binding protein 2##AK295006|EBNA1BP2|10969|EBNA1 binding protein 2##NM_006824|EBNA1BP2|10969|EBNA1 binding protein 2##NM_001159936|EBNA1BP2|10969|EBNA1 binding protein 2##NM_001167965|WDR65|149465|WD repeat domain 65##NM_001195831|WDR65|149465|WD repeat domain 65##NM_152498|WDR65|149465|WD repeat domain 65##AK056562|WDR65|149465|WD repeat domain 65##BC117280|WDR65|149465|WD repeat domain 65##BC117306|WDR65|149465|WD repeat domain 65##BC143804|WDR65|149465|WD repeat domain 65##AK223455|EBNA1BP2|10969|EBNA1 binding protein 2##NM_144626|TMEM125|128218|transmembrane protein 125##BC072393|TMEM125|128218|transmembrane protein 125##BC073924|EBNA1BP2|10969|EBNA1 binding protein 2##BC041633|C1orf210|149466|chromosome 1 open reading frame 210##NM_182517|C1orf210|149466|chromosome 1 open reading frame 210##NM_001164829|C1orf210|149466|chromosome 1 open reading frame 210	0.0	
chr19	44263693	44263874	reg1035641.p1	3.651	+	TSC_hg19_v1_chr19_-_44259117 NM_019108	-4655	-	TSC_hg19_v1_chr19_-_44259074 AK022948	-4690	-	TSC_hg19_v1_chr19_-_44259063 AK309830 BC008869 AL136606	-4763	-	AB128983 AB128984 AB128985 AF000972 AF022150 BT007426 CU677271 DQ891493 DQ894684 BC015337 AF395661 TSC_hg19_v1_chr19_-_44285137 AF033021	21292	-	TSC_hg19_v1_chr19_-_44285437 AF022797 NM_002250	21657	-	CU691254 AY358719 BC057816 AK301693 NM_001031749	42785	-	NM_019108|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK022948|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK309830|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC008869|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL136606|SMG9|56006|smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)##AB128983|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128984|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AB128985|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF000972|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF022150|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##BT007426|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##DQ891493|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##DQ894684|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##BC015337|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF395661|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF033021|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AF022797|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##NM_002250|KCNN4|3783|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4##AY358719|LYPD5|284348|LY6/PLAUR domain containing 5##BC057816|LYPD5|284348|LY6/PLAUR domain containing 5##AK301693|LYPD5|284348|LY6/PLAUR domain containing 5##NM_001031749|LYPD5|284348|LY6/PLAUR domain containing 5	0.0	
chr20	50114177	50114290	reg1033552.p1	3.651	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	-474576	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-538865	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-539170	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	44906	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	45042	-	EU887574 EU887577 NM_001136021	64934	-	BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.0	
chr6	164088990	164089093	reg1032135.p2	3.651	+	AL050218 TSC_hg19_v1_chr6_+_163984651	-104428	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	-252809	+	TSC_hg19_v1_chr6_+_163835795 AF272349	-253251	+	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	1634051	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	1986655	-	AY203946 TSC_hg19_v1_chr6_-_166076051	1987011	-	AL050218|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##AY203946|LOC100132188|100132188|LP7097	0.081977	
chr6	3746228	3746307	reg1042191.p1	3.651	+	TSC_hg19_v1_chr6_-_3720312 BC031944	-25957	-	BC040876 NM_015482	-289504	-	TSC_hg19_v1_chr6_-_3456513 AL110245	-289753	-	NM_183373 TSC_hg19_v1_chr6_-_3752248	5979	-	BC001261 NM_012135 Y18503	103359	+	TSC_hg19_v1_chr6_+_4021647 BC034969 NM_003913 AK291244 AB011108 AF283465 AB385345 AY029347	275322	+	BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##NM_183373|PXDC1|221749|PX domain containing 1##BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B##BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	0.0	
chr1	199050913	199051022	reg1035467.p1	3.650	+	TSC_hg19_v1_chr1_-_198906559 EF413001	-144420	-	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-442637	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-442742	+	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	945902	+	AK316513 TSC_hg19_v1_chr1_+_200011716	960757	+	NM_001105517	1131688	+	EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_001105517|FAM58BP|339521|family with sequence similarity 58, member B, pseudogene	0.0	
chr14	58539574	58539684	reg1009593.p2	3.650	+	NM_001206920	-207038	-	HQ258368 BC117405 BC143565 BC143566 BC143567 BC143568 AK307238 AK223127 AK001512 BC028060 NM_018168	-579126	-	TSC_hg19_v1_chr14_+_57857318 BC118589 BC122557	-682297	+	BC146861 BX161411 NM_001001872 AK292605 BX161448 TSC_hg19_v1_chr14_-_58618906	79227	-	TSC_hg19_v1_chr14_-_58618916 AK292513	79295	-	TSC_hg19_v1_chr14_+_58666880 NM_018477 AK000544 AF220190 AK222624 AK222702 BC005208 AK022534 AK315537 BC011997 DQ891294 DQ894478 AB529154 CU680156 BX248282	127255	+	NM_001206920|SLC35F4|341880|solute carrier family 35, member F4##HQ258368|C14orf105|55195|chromosome 14 open reading frame 105##BC117405|C14orf105|55195|chromosome 14 open reading frame 105##BC143565|C14orf105|55195|chromosome 14 open reading frame 105##BC143566|C14orf105|55195|chromosome 14 open reading frame 105##BC143567|C14orf105|55195|chromosome 14 open reading frame 105##BC143568|C14orf105|55195|chromosome 14 open reading frame 105##AK307238|C14orf105|55195|chromosome 14 open reading frame 105##AK223127|C14orf105|55195|chromosome 14 open reading frame 105##AK001512|C14orf105|55195|chromosome 14 open reading frame 105##BC028060|C14orf105|55195|chromosome 14 open reading frame 105##NM_018168|C14orf105|55195|chromosome 14 open reading frame 105##BC118589|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC122557|NAA30|122830|N(alpha)-acetyltransferase 30, NatC catalytic subunit##BC146861|C14orf37|145407|chromosome 14 open reading frame 37##BX161411|C14orf37|145407|chromosome 14 open reading frame 37##NM_001001872|C14orf37|145407|chromosome 14 open reading frame 37##AK292605|C14orf37|145407|chromosome 14 open reading frame 37##BX161448|C14orf37|145407|chromosome 14 open reading frame 37##AK292513|C14orf37|145407|chromosome 14 open reading frame 37##NM_018477|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK000544|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AF220190|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK222624|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK222702|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BC005208|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK022534|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##AK315537|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BC011997|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##DQ891294|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##DQ894478|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)##BX248282|ACTR10|55860|actin-related protein 10 homolog (S. cerevisiae)	0.0	
chr14	90755818	90755904	reg1035441.p1	3.650	+	L02426 NM_002802 TSC_hg19_v1_chr14_+_90722920 AK313325 BC000512 BC016368 AK299121 BC067741 AK222668	-32952	+	NM_022054 BC012779	-227754	+	TSC_hg19_v1_chr14_+_90422278 AK001952 BC015474 AK315549 BX161451	-333582	+	BC008925 BC033136 BC098568 TSC_hg19_v1_chr14_-_90798286 AK000870 AK294958 BC021805 NM_017970	42505	-	TSC_hg19_v1_chr14_+_90863329 NM_006888	107462	+	TSC_hg19_v1_chr14_+_90863372 BC011834 BC047523 U16851 BC000454 BC008597 AK289937 M27319	107566	+	L02426|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##NM_002802|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##AK313325|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC000512|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC016368|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##AK299121|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC067741|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##AK222668|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##NM_022054|KCNK13|56659|potassium channel, subfamily K, member 13##BC012779|KCNK13|56659|potassium channel, subfamily K, member 13##AK001952|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC015474|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK315549|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BX161451|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC008925|C14orf102|55051|chromosome 14 open reading frame 102##BC033136|C14orf102|55051|chromosome 14 open reading frame 102##BC098568|C14orf102|55051|chromosome 14 open reading frame 102##AK000870|C14orf102|55051|chromosome 14 open reading frame 102##AK294958|C14orf102|55051|chromosome 14 open reading frame 102##BC021805|C14orf102|55051|chromosome 14 open reading frame 102##NM_017970|C14orf102|55051|chromosome 14 open reading frame 102##NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)	0.920591	CTCF.p2:5:0.921
chr21	36043018	36043197	reg1031193.p4	3.650	+	AF448438 AF448439 NM_053277	-1420	+	BT007363 CU678256 AF303449 U85266 TSC_hg19_v1_chr21_-_35987486 BC002864 AK092184 AX747397 NM_004414 AY325903	-55761	-	NM_203417 U85265	-56363	-	S76350 GU070939 TSC_hg19_v1_chr21_-_36231874	188729	-	S76345 S76346 GU070941 TSC_hg19_v1_chr21_-_36252995	209829	-	TSC_hg19_v1_chr21_-_36259250 EU093088	216165	-	AF448438|CLIC6|54102|chloride intracellular channel 6##AF448439|CLIC6|54102|chloride intracellular channel 6##NM_053277|CLIC6|54102|chloride intracellular channel 6##BT007363|RCAN1|1827|regulator of calcineurin 1##AF303449|RCAN1|1827|regulator of calcineurin 1##U85266|RCAN1|1827|regulator of calcineurin 1##BC002864|RCAN1|1827|regulator of calcineurin 1##AK092184|RCAN1|1827|regulator of calcineurin 1##NM_004414|RCAN1|1827|regulator of calcineurin 1##AY325903|RCAN1|1827|regulator of calcineurin 1##NM_203417|RCAN1|1827|regulator of calcineurin 1##U85265|RCAN1|1827|regulator of calcineurin 1##S76350|RUNX1|861|runt-related transcription factor 1##S76345|RUNX1|861|runt-related transcription factor 1##S76346|RUNX1|861|runt-related transcription factor 1	0.0	
chr21	45875889	45875981	reg1036089.p1	3.650	+	BC064321 AK127604 NM_030891 TSC_hg19_v1_chr21_+_45875413 AY358120	-533	+	NM_003307 TSC_hg19_v1_chr21_+_45773503 AJ878416 AJ417076 BC112342 AY603182	-102402	+	TSC_hg19_v1_chr21_+_45770074 AB166745	-105925	+	TSC_hg19_v1_chr21_+_45905450 AK057525	29515	+	BC016690 BC064517 TSC_hg19_v1_chr21_+_45937524 BC101650 BC101654	61605	+	BC120959 BC120960 AB076347 NM_198691	84139	-	BC064321|LRRC3|81543|leucine rich repeat containing 3##AK127604|LRRC3|81543|leucine rich repeat containing 3##NM_030891|LRRC3|81543|leucine rich repeat containing 3##AY358120|LRRC3|81543|leucine rich repeat containing 3##NM_003307|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##AJ878416|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##AJ417076|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##BC112342|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##AY603182|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##AB166745|TRPM2|7226|transient receptor potential cation channel, subfamily M, member 2##BC016690|C21orf90|114043|chromosome 21 open reading frame 90##BC064517|C21orf90|114043|chromosome 21 open reading frame 90##BC101650|C21orf90|114043|chromosome 21 open reading frame 90##BC101654|C21orf90|114043|chromosome 21 open reading frame 90##BC120959|KRTAP10-1|386677|keratin associated protein 10-1##BC120960|KRTAP10-1|386677|keratin associated protein 10-1##AB076347|KRTAP10-1|386677|keratin associated protein 10-1##NM_198691|KRTAP10-1|386677|keratin associated protein 10-1	0.044182	
chr2	152861271	152861358	reg1019179.p1	3.650	+	AY054985 AK290049 NM_001005747	-30848	-	TSC_hg19_v1_chr2_-_152684998 NM_001037174 NM_012097 NM_177985	-176318	-	TSC_hg19_v1_chr2_-_152684936 AF087889 AK298937	-176368	-	AK294398 AK316045 TSC_hg19_v1_chr2_-_152955250 NM_001005746	93916	-	AF038852 AB302276 BC075049 NM_000726 NM_001145798 U95020	94233	-	TSC_hg19_v1_chr2_-_152955813 AK291378	94497	-	AY054985|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK290049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005747|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001037174|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_012097|ARL5A|26225|ADP-ribosylation factor-like 5A##NM_177985|ARL5A|26225|ADP-ribosylation factor-like 5A##AF087889|ARL5A|26225|ADP-ribosylation factor-like 5A##AK298937|ARL5A|26225|ADP-ribosylation factor-like 5A##AK294398|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK316045|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001005746|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AF038852|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AB302276|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##BC075049|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_000726|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##NM_001145798|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##U95020|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit##AK291378|CACNB4|785|calcium channel, voltage-dependent, beta 4 subunit	0.0	
chr3	2208382	2208471	reg1044210.p1	3.650	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	-67865	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	-1073763	+	AK126307 TSC_hg19_v1_chr3_+_577916	-1630511	+	NM_001206955	72086	+	AK095729 TSC_hg19_v1_chr3_+_2553286	344854	+	NM_001206956 NM_175613 AK057278 AK314396 BC026119	725483	+	AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##NM_001206955|CNTN4|152330|contactin 4##AK095729|CNTN4|152330|contactin 4##NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4	0.297379	CTCF.p2:10:0.297
chr5	157002758	157002832	reg1032118.p3	3.650	+	AB462931 TSC_hg19_v1_chr5_-_157002728	-79	-	TSC_hg19_v1_chr5_+_156887210 AK026158 AK308830 AK309242	-115525	+	AK296972 NM_001099287 NM_001172292	-115769	+	AF311317 AF326918 TSC_hg19_v1_chr5_-_157002784 Y13786 AK091464 AK308182 AX747000 NM_033274	10	-	AB527685 TSC_hg19_v1_chr5_-_157079170	76333	-	AB022083 AB022441 AK308329 AK225861 BC033492 NM_007017 NM_178424	76604	-	AK026158|NIPAL4|348938|NIPA-like domain containing 4##AK308830|NIPAL4|348938|NIPA-like domain containing 4##AK309242|NIPAL4|348938|NIPA-like domain containing 4##AK296972|NIPAL4|348938|NIPA-like domain containing 4##NM_001099287|NIPAL4|348938|NIPA-like domain containing 4##NM_001172292|NIPAL4|348938|NIPA-like domain containing 4##AF311317|ADAM19|8728|ADAM metallopeptidase domain 19##AF326918|ADAM19|8728|ADAM metallopeptidase domain 19##Y13786|ADAM19|8728|ADAM metallopeptidase domain 19##AK091464|ADAM19|8728|ADAM metallopeptidase domain 19##AK308182|ADAM19|8728|ADAM metallopeptidase domain 19##NM_033274|ADAM19|8728|ADAM metallopeptidase domain 19##AB022083|SOX30|11063|SRY (sex determining region Y)-box 30##AB022441|SOX30|11063|SRY (sex determining region Y)-box 30##AK308329|SOX30|11063|SRY (sex determining region Y)-box 30##BC033492|SOX30|11063|SRY (sex determining region Y)-box 30##NM_007017|SOX30|11063|SRY (sex determining region Y)-box 30##NM_178424|SOX30|11063|SRY (sex determining region Y)-box 30	0.01802	
chr5	80479408	80479475	reg1031197.p2	3.650	+	AF023130 AF181250 TSC_hg19_v1_chr5_+_80256561	-222882	+	TSC_hg19_v1_chr5_+_80256463 BC126112 BC136296 BC143870 NM_006909	-222959	+	TSC_hg19_v1_chr5_-_79950786 BC003584 BC071996 NM_000791	-528646	-	NM_001099735 NM_001099736 NM_001825 TSC_hg19_v1_chr5_+_80529140 AK313293 BC029140 AK122769	49707	+	TSC_hg19_v1_chr5_-_80597338 AK096014	117884	-	AK092460 TSC_hg19_v1_chr5_-_80597373 AK096680	117931	-	AF023130|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF181250|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC126112|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC136296|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC143870|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_006909|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC003584|DHFR|1719|dihydrofolate reductase##BC071996|DHFR|1719|dihydrofolate reductase##NM_000791|DHFR|1719|dihydrofolate reductase##NM_001099735|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001099736|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001825|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK313293|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##BC029140|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK122769|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK096014|LOC100131067|100131067|uncharacterized LOC100131067##AK092460|LOC100131067|100131067|uncharacterized LOC100131067##AK096680|LOC100131067|100131067|uncharacterized LOC100131067	0.0	
chr5	81893409	81893510	reg1038813.p1	3.650	+	BC093982 BC112191 NM_001017971	-292294	+	TSC_hg19_v1_chr5_-_81574219 NM_001025	-319240	-	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	-319288	-	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	479738	-	TSC_hg19_v1_chr5_-_82373255 NM_174909	479803	-	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	479924	+	BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001025|RPS23|6228|ribosomal protein S23##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##NM_174909|TMEM167A|153339|transmembrane protein 167A##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4	0.0	
chr6	88877384	88877565	reg1039358.p2	3.650	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-1708	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-22438	-	BC029488 NM_030960 AF203447	-119944	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	795717	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	795834	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	795873	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.0	
chr7	100075014	100075154	reg1043383.p1	3.650	+	BC031966 NM_001004323	-13191	-	TSC_hg19_v1_chr7_-_100034098 BC026269 NM_145030	-41007	-	TSC_hg19_v1_chr7_+_100027484 AK291366 BC000556 BC018935	-47555	+	BC001966 BC031622 AK314824 TSC_hg19_v1_chr7_-_100076802 BC002972 BC010406 AK296580 AK297702 AK310800 BC001486 NM_030935	1743	-	AK124773 NM_173564	6465	+	TSC_hg19_v1_chr7_+_100136826 NM_006076 BC009393	61727	+	BC031966|C7orf61|402573|chromosome 7 open reading frame 61##NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61##BC026269|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##NM_145030|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##AK291366|MEPCE|56257|methylphosphate capping enzyme##BC000556|MEPCE|56257|methylphosphate capping enzyme##BC018935|MEPCE|56257|methylphosphate capping enzyme##BC001966|TSC22D4|81628|TSC22 domain family, member 4##BC031622|TSC22D4|81628|TSC22 domain family, member 4##AK314824|TSC22D4|81628|TSC22 domain family, member 4##BC002972|TSC22D4|81628|TSC22 domain family, member 4##BC010406|TSC22D4|81628|TSC22 domain family, member 4##AK296580|TSC22D4|81628|TSC22 domain family, member 4##AK297702|TSC22D4|81628|TSC22 domain family, member 4##BC001486|TSC22D4|81628|TSC22 domain family, member 4##NM_030935|TSC22D4|81628|TSC22 domain family, member 4##AK124773|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_173564|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_006076|AGFG2|3268|ArfGAP with FG repeats 2##BC009393|AGFG2|3268|ArfGAP with FG repeats 2	0.665061	CTCF.p2:60:0.653
chr1	203280996	203281072	reg1036327.p2	3.649	+	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	-6345	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-82219	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-125108	-	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	36350	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	39175	-	AK172740 TSC_hg19_v1_chr1_-_203320256	39227	-	NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.0	
chr14	93479719	93479891	reg1037339.p1	3.649	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-90208	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	-90361	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-219119	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	101786	-	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	102409	-	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	171395	-	AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1	0.0	
chr15	70414408	70414542	reg1036418.p1	3.649	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-24232	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-24248	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-72566	-	TSC_hg19_v1_chr15_-_70878946 BC040579	464469	-	BC016881 AL834243 NM_001008224 AK055435	580152	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	641367	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.935676	CTCF.p2:-18:0.936
chr16	5074732	5074871	reg1036782.p1	3.649	+	AB007880 NM_014692	-66484	+	AF013717 BC114620 AF001691 NM_002705 TSC_hg19_v1_chr16_-_4987144	-87697	-	NM_016936 AF108461	-172656	+	TSC_hg19_v1_chr16_+_5083673 AK055222	8885	+	TSC_hg19_v1_chr16_-_5083927 AF187072 AK026122 BC012194	9120	-	TSC_hg19_v1_chr16_-_5083937 AK127952 AK314320 AK302916 AK025570 NM_016256	9136	-	AB007880|SEC14L5|9717|SEC14-like 5 (S. cerevisiae)##NM_014692|SEC14L5|9717|SEC14-like 5 (S. cerevisiae)##AF013717|PPL|5493|periplakin##BC114620|PPL|5493|periplakin##AF001691|PPL|5493|periplakin##NM_002705|PPL|5493|periplakin##NM_016936|UBN1|29855|ubinuclein 1##AF108461|UBN1|29855|ubinuclein 1##AK055222|LOC100507589|100507589|uncharacterized LOC100507589##AF187072|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK026122|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##BC012194|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK127952|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK314320|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK302916|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##AK025570|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase##NM_016256|NAGPA|51172|N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	0.04492	
chr16	89431707	89431810	reg1042987.p1	3.649	+	AK293862 NM_001242885	-44218	+	BC041585 TSC_hg19_v1_chr16_-_89351073	-80802	-	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	-81684	-	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	125173	-	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	143056	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	195307	+	AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC041585|ANKRD11|29123|ankyrin repeat domain 11##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13	0.0	
chr19	45617325	45617423	reg1034075.p2	3.649	+	TSC_hg19_v1_chr19_+_45596436 NM_019121	-20952	+	TSC_hg19_v1_chr19_+_45596205 BC035704	-21159	+	TSC_hg19_v1_chr19_+_45582529 NM_001007270 NM_001007269 NM_024707 AK024018 BC007793	-34861	+	NM_198478	46033	-	TSC_hg19_v1_chr19_-_45681496 FJ418644 BC001907 NM_024108 BC004450 AF161407	64104	-	NM_212550 AK296695 TSC_hg19_v1_chr19_+_45682022	64639	+	NM_019121|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##BC035704|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##NM_001007270|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_001007269|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_024707|GEMIN7|79760|gem (nuclear organelle) associated protein 7##AK024018|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC007793|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_198478|NKPD1|284353|NTPase, KAP family P-loop domain containing 1##FJ418644|TRAPPC6A|79090|trafficking protein particle complex 6A##BC001907|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_024108|TRAPPC6A|79090|trafficking protein particle complex 6A##BC004450|TRAPPC6A|79090|trafficking protein particle complex 6A##AF161407|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_212550|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3##AK296695|BLOC1S3|388552|biogenesis of lysosomal organelles complex-1, subunit 3	0.0	
chr3	53194632	53194782	reg1033906.p1	3.649	+	TSC_hg19_v1_chr3_-_53164452 AJ318099 BC043595 NM_052859	-30256	-	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	-114644	-	TSC_hg19_v1_chr3_-_53080023 BC014614 AF168132	-114713	-	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	512	+	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	95304	-	TSC_hg19_v1_chr3_-_53290099 NM_001064 NM_001135055	95407	-	AJ318099|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043595|RFT1|91869|RFT1 homolog (S. cerevisiae)##NM_052859|RFT1|91869|RFT1 homolog (S. cerevisiae)##AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1##BC014614|SFMBT1|51460|Scm-like with four mbt domains 1##AF168132|SFMBT1|51460|Scm-like with four mbt domains 1##BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase##NM_001064|TKT|7086|transketolase##NM_001135055|TKT|7086|transketolase	0.0	
chr4	165805390	165805473	reg1034263.p1	3.649	+	AK289711 NM_001166373	-501025	-	NM_012403	-686569	-	AB463878 AK000675 AK301408 NM_017923	-1270716	-	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	72671	+	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	72720	+	BC089393 NM_001012414	93386	-	AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61	0.048204	
chr5	176809788	176809886	reg1035926.p2	3.649	+	TSC_hg19_v1_chr5_+_176794314 AK098150	-15524	+	TSC_hg19_v1_chr5_+_176784947 AB590533	-24852	+	AK123382 NM_006480 TSC_hg19_v1_chr5_+_176784882 BC014094	-24955	+	AK096088 NM_001167579 NM_003052 TSC_hg19_v1_chr5_+_176811434 AK298299 BC053349 BC035294 BC050385 L13258	1605	+	BC132952 BC132954 NM_001029886	17799	-	TSC_hg19_v1_chr5_-_176831183 BT007350	21388	-	AK098150|RGS14|10636|regulator of G-protein signaling 14##AK123382|RGS14|10636|regulator of G-protein signaling 14##NM_006480|RGS14|10636|regulator of G-protein signaling 14##BC014094|RGS14|10636|regulator of G-protein signaling 14##AK096088|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_001167579|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_003052|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK298299|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC053349|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC035294|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC050385|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##L13258|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC132952|PFN3|345456|profilin 3##BC132954|PFN3|345456|profilin 3##NM_001029886|PFN3|345456|profilin 3##BT007350|F12|2161|coagulation factor XII (Hageman factor)	0.064513	
chr6	286551	286731	reg1025411.p1	3.649	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	5444	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	5856	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	105123	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.0	
chr6	33059884	33059971	reg1037807.p1	3.649	+	NM_001242524 NM_001242525	-11373	-	NM_002121 AK291986 AK303153 TSC_hg19_v1_chr6_+_33043767 AK301322 J03041 X01426 M83664 AK313305 BC013184 AY831401 AY831402 AY831403 AY804132 AY804142 X03067 AY804140 AY804134 AY804135 AY804137 AY804138 AY804139 AY804143 BC007963 BC015000 AB208978 AY804141 M28200 DQ284441 AY804133 AY804136 AB529034 DQ891050 DQ894229 CU680546 AY656678 AY656679 AY656680 AY831404 BT019780 GQ891549 M28202 M21886	-16124	+	X00457 AB590198 CU679537 DQ893463 DQ896324 AB209058 AK292709 TSC_hg19_v1_chr6_-_33041427 BC009956 M27487 NM_033554	-18559	-	TSC_hg19_v1_chr6_-_33160241 BC053886 NM_001163771 NM_080679 NM_080680 NM_080681	100338	-	TSC_hg19_v1_chr6_-_33168171 BT007280 HQ692844 HQ709179 AB384890	108281	-	M84820 AB209244 X63522 TSC_hg19_v1_chr6_-_33168436 AK225842 BC001167 NM_021976 AK295759	108476	-	NM_001242524|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_001242525|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_002121|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK291986|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK303153|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK301322|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##J03041|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X01426|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M83664|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK313305|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC013184|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831401|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831402|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831403|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804132|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804142|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X03067|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804140|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804134|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804135|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804137|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804138|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804139|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804143|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC007963|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC015000|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AB208978|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804141|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M28200|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ284441|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804133|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804136|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ891050|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ894229|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656678|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656679|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656680|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831404|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BT019780|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##GQ891549|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M28202|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M21886|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X00457|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ893463|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ896324|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AB209058|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AK292709|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##BC009956|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##M27487|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_033554|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##BC053886|COL11A2|1302|collagen, type XI, alpha 2##NM_001163771|COL11A2|1302|collagen, type XI, alpha 2##NM_080679|COL11A2|1302|collagen, type XI, alpha 2##NM_080680|COL11A2|1302|collagen, type XI, alpha 2##NM_080681|COL11A2|1302|collagen, type XI, alpha 2##BT007280|RXRB|6257|retinoid X receptor, beta##M84820|RXRB|6257|retinoid X receptor, beta##AB209244|RXRB|6257|retinoid X receptor, beta##X63522|RXRB|6257|retinoid X receptor, beta##AK225842|RXRB|6257|retinoid X receptor, beta##BC001167|RXRB|6257|retinoid X receptor, beta##NM_021976|RXRB|6257|retinoid X receptor, beta##AK295759|RXRB|6257|retinoid X receptor, beta	0.913401	CTCF.p2:12:0.913
chr7	5597934	5598115	reg1004612.p1	3.649	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-27815	-	TSC_hg19_v1_chr7_-_5569235 BC012854 CU680416 EF095209 BC008633 DQ471327 AB385102 DQ890960 DQ894128 K00790	-28778	-	BC113036 TSC_hg19_v1_chr7_-_5568855	-29183	-	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	34414	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	34486	+	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	223198	-	X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##BC012854|ACTB|60|actin, beta##EF095209|ACTB|60|actin, beta##BC008633|ACTB|60|actin, beta##DQ471327|ACTB|60|actin, beta##DQ890960|ACTB|60|actin, beta##DQ894128|ACTB|60|actin, beta##K00790|ACTB|60|actin, beta##BC113036|ACTB|60|actin, beta##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216	0.0	
chr8	60031649	60031716	reg1046890.p2	3.649	+	AB385385 DQ891665 DQ894852 AK000971 BC016665 AK302331 AB018351 NM_014729 TSC_hg19_v1_chr8_-_60031796	-10	-	NM_003580 TSC_hg19_v1_chr8_-_59572413	-459271	-	BC041124 TSC_hg19_v1_chr8_-_59572386	-459296	-	BC015531 BC108929 BC082971 TSC_hg19_v1_chr8_-_61193958 BC069744 AK090655 AK289470 AK314538 AY075022 NM_004056	1162239	-	TSC_hg19_v1_chr8_+_61429488 NM_001242644 NM_002865	1397758	+	AK297576 TSC_hg19_v1_chr8_+_61429494	1397812	+	DQ891665|TOX|9760|thymocyte selection-associated high mobility group box##DQ894852|TOX|9760|thymocyte selection-associated high mobility group box##AK000971|TOX|9760|thymocyte selection-associated high mobility group box##BC016665|TOX|9760|thymocyte selection-associated high mobility group box##AK302331|TOX|9760|thymocyte selection-associated high mobility group box##AB018351|TOX|9760|thymocyte selection-associated high mobility group box##NM_014729|TOX|9760|thymocyte selection-associated high mobility group box##NM_003580|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC041124|NSMAF|8439|neutral sphingomyelinase (N-SMase) activation associated factor##BC015531|CA8|767|carbonic anhydrase VIII##BC108929|CA8|767|carbonic anhydrase VIII##BC069744|CA8|767|carbonic anhydrase VIII##AK090655|CA8|767|carbonic anhydrase VIII##AK289470|CA8|767|carbonic anhydrase VIII##AK314538|CA8|767|carbonic anhydrase VIII##AY075022|CA8|767|carbonic anhydrase VIII##NM_004056|CA8|767|carbonic anhydrase VIII##NM_001242644|RAB2A|5862|RAB2A, member RAS oncogene family##NM_002865|RAB2A|5862|RAB2A, member RAS oncogene family##AK297576|RAB2A|5862|RAB2A, member RAS oncogene family	0.0	
chr8	9686866	9687046	reg1007625.p1	3.649	+	TSC_hg19_v1_chr8_+_9413439 BC023578 AF082556 NM_003747 AK301798	-273475	+	TSC_hg19_v1_chr8_+_9413423 AK302031	-273533	+	TSC_hg19_v1_chr8_+_9413421 BC098394	-273551	+	TSC_hg19_v1_chr8_+_9911765 AY958429	224813	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	224923	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	266107	+	BC023578|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AF082556|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##NM_003747|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK301798|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AK302031|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##BC098394|TNKS|8658|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase##AY958429|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A	0.0	
chr9	102861194	102861361	reg1039929.p1	3.649	+	AB383909 AJ344330 TSC_hg19_v1_chr9_-_102861281 AB011145 AY359048 BX648519	-75	-	TSC_hg19_v1_chr9_+_102677458 BC101564 BC101566 BC143430 BC039048	-183817	+	TSC_hg19_v1_chr9_+_102668954 BC111009 AK000658 BC070269 AK095262 AL833620	-192276	+	TSC_hg19_v1_chr9_-_102861295 BC005374	16	-	TSC_hg19_v1_chr9_-_102861305 AK075024 NM_015051	44	-	TSC_hg19_v1_chr9_+_102861524 BC041665 NM_014425 NM_183245 AK312795	204	+	AJ344330|ERP44|23071|endoplasmic reticulum protein 44##AB011145|ERP44|23071|endoplasmic reticulum protein 44##AY359048|ERP44|23071|endoplasmic reticulum protein 44##BX648519|ERP44|23071|endoplasmic reticulum protein 44##BC101564|STX17|55014|syntaxin 17##BC101566|STX17|55014|syntaxin 17##BC143430|STX17|55014|syntaxin 17##BC111009|STX17|55014|syntaxin 17##AK000658|STX17|55014|syntaxin 17##BC070269|STX17|55014|syntaxin 17##AK095262|STX17|55014|syntaxin 17##AL833620|STX17|55014|syntaxin 17##BC005374|ERP44|23071|endoplasmic reticulum protein 44##AK075024|ERP44|23071|endoplasmic reticulum protein 44##NM_015051|ERP44|23071|endoplasmic reticulum protein 44##BC041665|INVS|27130|inversin##NM_014425|INVS|27130|inversin##NM_183245|INVS|27130|inversin##AK312795|INVS|27130|inversin	0.0	
chr9	131013376	131013442	reg1044583.p2	3.649	+	TSC_hg19_v1_chr9_-_130966499 AK023978 NM_001131015 NM_012127	-46835	-	TSC_hg19_v1_chr9_+_130965688 L07807 BC063850 AK225179	-47691	+	AK296326 TSC_hg19_v1_chr9_+_130965667	-47743	+	TSC_hg19_v1_chr9_-_131038221 BX647920 AF248953 CU686726 BC069268 NM_004486	24858	-	TSC_hg19_v1_chr9_+_131038421 DQ414820 NM_001040011	25013	+	BC029911 AK311408 TSC_hg19_v1_chr9_+_131038571	25126	+	AK023978|CIZ1|25792|CDKN1A interacting zinc finger protein 1##NM_001131015|CIZ1|25792|CDKN1A interacting zinc finger protein 1##NM_012127|CIZ1|25792|CDKN1A interacting zinc finger protein 1##L07807|DNM1|1759|dynamin 1##BC063850|DNM1|1759|dynamin 1##AK225179|DNM1|1759|dynamin 1##AK296326|DNM1|1759|dynamin 1##BX647920|GOLGA2|2801|golgin A2##AF248953|GOLGA2|2801|golgin A2##BC069268|GOLGA2|2801|golgin A2##NM_004486|GOLGA2|2801|golgin A2##DQ414820|SWI5|375757|SWI5 recombination repair homolog (yeast)##NM_001040011|SWI5|375757|SWI5 recombination repair homolog (yeast)##BC029911|SWI5|375757|SWI5 recombination repair homolog (yeast)##AK311408|SWI5|375757|SWI5 recombination repair homolog (yeast)	0.0	
chr11	12257879	12258039	reg1003085.p2	3.648	+	TSC_hg19_v1_chr11_+_12132122 BC044577 NM_014632 BC015755 AB018293	-125829	+	TSC_hg19_v1_chr11_-_12030884 AB057591 NM_013253	-227057	-	TSC_hg19_v1_chr11_-_12030877 AY358378	-227101	-	AK123671 NM_032867	50487	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	141150	+	TSC_hg19_v1_chr11_+_12695982 NM_021961	438004	+	BC044577|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_014632|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##BC015755|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB018293|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB057591|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_013253|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AY358378|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha##NM_021961|TEAD1|7003|TEA domain family member 1 (SV40 transcriptional enhancer factor)	0.0	
chr11	73706278	73706420	reg1038557.p2	3.648	+	TSC_hg19_v1_chr11_-_73694300 AK025742	-12006	-	TSC_hg19_v1_chr11_-_73693886 AK222540 AK222557 NM_003355	-12464	-	U94592 BC011737 TSC_hg19_v1_chr11_-_73693862	-12505	-	NM_003356 NM_022803	13932	-	TSC_hg19_v1_chr11_-_73881923 AB231764 AK092089 AX747350 BC037429 NM_015531	175719	-	TSC_hg19_v1_chr11_+_73882299 AK022725	175933	+	AK025742|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##BC011737|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003356|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##NM_022803|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3##AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3##NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3##AK022725|PPME1|51400|protein phosphatase methylesterase 1	0.0	
chr14	103274065	103274132	reg1036547.p2	3.648	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	-30198	+	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	-30279	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-214937	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	114900	+	TSC_hg19_v1_chr14_-_103430941 BX248752	156860	-	AB384568 TSC_hg19_v1_chr14_-_103523568	249443	-	AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AF155595|RCOR1|23186|REST corepressor 1##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)##BX248752|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)	0.0	
chr14	22392851	22392939	reg1040245.p1	3.648	+	AB463964 NM_001001912 AY726598	-259573	+	NM_001005466 AB529274 BC137371 BC137382	-289849	-	AB528817 NM_001005465	-354021	-	X58763 TSC_hg19_v1_chr14_+_22989364	596454	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	665191	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	665239	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.98062	CTCF.p2:-1:0.981
chr15	30465332	30465482	reg1023676.p1	3.648	+	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	-350784	-	AK304758 TSC_hg19_v1_chr15_-_30114336	-351065	-	NM_015307	-602481	-	BC101345 BC101346 BC101347 BC101348 AK292984 AF029838 AF029839 NM_139320 NM_148911	220305	-	TSC_hg19_v1_chr15_+_30918372 BC071990	452979	+	BC105788 NM_001039841	453471	+	BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##BC101345|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101346|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101347|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC101348|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AK292984|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029838|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##AF029839|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_139320|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##NM_148911|CHRFAM7A|89832|CHRNA7 (cholinergic receptor, nicotinic, alpha 7, exons 5-10) and FAM7A (family with sequence similarity 7A, exons A-E) fusion##BC071990|ARHGAP11B|89839|Rho GTPase activating protein 11B##BC105788|ARHGAP11B|89839|Rho GTPase activating protein 11B##NM_001039841|ARHGAP11B|89839|Rho GTPase activating protein 11B	0.0	
chr16	85513651	85513732	reg1015473.p1	3.648	+	BC093665 BC111944 AK126284 NM_198491	-367637	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-452321	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-468562	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	131330	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	133262	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	208851	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.0	
chr20	23342313	23342444	reg1034441.p1	3.648	+	BC003410 NM_013248 TSC_hg19_v1_chr20_+_23331435 AK026360 BC000759 BC003029 AF156957 BC002687	-10934	+	AB527124 AM393282 AM393752 DQ891055 DQ894234 TSC_hg19_v1_chr20_-_23066962 AJ295142 AB209895 BC028075 AK299957 NM_012072 U94333	-275445	-	TSC_hg19_v1_chr20_-_23062805 AK056764	-279566	-	AK295362 TSC_hg19_v1_chr20_+_23342818 AK056477 AK293942 AK314599	435	+	TSC_hg19_v1_chr20_+_23342853 AK289814	481	+	AB100265 AB463678 BC125188 BC154409 NM_022482	2642	+	BC003410|NXT1|29107|NTF2-like export factor 1##NM_013248|NXT1|29107|NTF2-like export factor 1##AK026360|NXT1|29107|NTF2-like export factor 1##BC000759|NXT1|29107|NTF2-like export factor 1##BC003029|NXT1|29107|NTF2-like export factor 1##AF156957|NXT1|29107|NTF2-like export factor 1##BC002687|NXT1|29107|NTF2-like export factor 1##AM393282|CD93|22918|CD93 molecule##AM393752|CD93|22918|CD93 molecule##DQ891055|CD93|22918|CD93 molecule##DQ894234|CD93|22918|CD93 molecule##AJ295142|CD93|22918|CD93 molecule##AB209895|CD93|22918|CD93 molecule##BC028075|CD93|22918|CD93 molecule##AK299957|CD93|22918|CD93 molecule##NM_012072|CD93|22918|CD93 molecule##U94333|CD93|22918|CD93 molecule##AK056764|CD93|22918|CD93 molecule##AK295362|GZF1|64412|GDNF-inducible zinc finger protein 1##AK056477|GZF1|64412|GDNF-inducible zinc finger protein 1##AK293942|GZF1|64412|GDNF-inducible zinc finger protein 1##AK314599|GZF1|64412|GDNF-inducible zinc finger protein 1##AK289814|GZF1|64412|GDNF-inducible zinc finger protein 1##AB100265|GZF1|64412|GDNF-inducible zinc finger protein 1##BC125188|GZF1|64412|GDNF-inducible zinc finger protein 1##BC154409|GZF1|64412|GDNF-inducible zinc finger protein 1##NM_022482|GZF1|64412|GDNF-inducible zinc finger protein 1	0.0	
chr21	29894424	29894528	reg1037827.p1	3.648	+	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	-1555037	-	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	-1676764	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	-1677005	-	TSC_hg19_v1_chr21_-_30257688 AB590951 BC011554 AK314100 AK225515 AF139682 NM_013240 NM_182749	363187	-	BC007525 AB384515 TSC_hg19_v1_chr21_-_30365185 AF161350 AB018257 BC150284 AB621822 BC029371 BC140790 AK001915 BC031633 NM_015565	470717	-	CU676110 TSC_hg19_v1_chr21_-_30391645 AF212232 BC012546 Y19009 BC017912 AK000056 AL355727 NM_016940 AK223357	497171	-	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##BC007525|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF161350|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AB018257|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC150284|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC029371|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC140790|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AK001915|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC031633|LTN1|26046|listerin E3 ubiquitin protein ligase 1##NM_015565|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF212232|RWDD2B|10069|RWD domain containing 2B##BC012546|RWDD2B|10069|RWD domain containing 2B##Y19009|RWDD2B|10069|RWD domain containing 2B##BC017912|RWDD2B|10069|RWD domain containing 2B##AK000056|RWDD2B|10069|RWD domain containing 2B##AL355727|RWDD2B|10069|RWD domain containing 2B##NM_016940|RWDD2B|10069|RWD domain containing 2B##AK223357|RWDD2B|10069|RWD domain containing 2B	0.91685	CTCF.p2:0:0.917
chr21	38372768	38372948	reg1035236.p1	3.648	+	TSC_hg19_v1_chr21_-_38362512 BC060787 D23672 NM_000411	-10178	-	TSC_hg19_v1_chr21_-_38353235 NM_001242785	-19618	-	AJ001864 TSC_hg19_v1_chr21_-_38352974	-19908	-	AB037158 NM_018962	6004	+	AB463579 TSC_hg19_v1_chr21_+_38379101	6227	+	AB039659 BT007053 AK316609 AK026311 AK314457 AB037163 AB035745 AF237812 AK304656 NM_153681 AB035744 TSC_hg19_v1_chr21_-_38445363 AB037164 AB035743 BC005180 BC011007 AF216305	72236	-	BC060787|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##D23672|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_000411|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##NM_001242785|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##AJ001864|HLCS|3141|holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)##AB037158|DSCR6|53820|Down syndrome critical region gene 6##NM_018962|DSCR6|53820|Down syndrome critical region gene 6##AB039659|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##BT007053|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AK316609|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AK026311|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AK314457|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB037163|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB035745|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AF237812|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AK304656|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##NM_153681|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB035744|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB037164|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AB035743|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##BC005180|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##BC011007|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P##AF216305|PIGP|51227|phosphatidylinositol glycan anchor biosynthesis, class P	0.978216	CTCF.p2:-24:0.978
chr22	40832827	40832934	reg1016302.p1	3.648	+	TSC_hg19_v1_chr22_+_40766652 AK301042	-66225	+	TSC_hg19_v1_chr22_+_40766636 AY308849 BC008078	-66239	+	TSC_hg19_v1_chr22_+_40766634 AK297599	-66248	+	TSC_hg19_v1_chr22_-_40859427 AJ297257	26550	-	TSC_hg19_v1_chr22_-_41032681 AF368061	199773	-	TSC_hg19_v1_chr22_-_41032716 BC115039 NM_020831 AF448806 AB037859 BC064620 AJ297258	199824	-	AK301042|SGSM3|27352|small G protein signaling modulator 3##AY308849|SGSM3|27352|small G protein signaling modulator 3##BC008078|SGSM3|27352|small G protein signaling modulator 3##AK297599|SGSM3|27352|small G protein signaling modulator 3##AJ297257|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF368061|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC115039|MKL1|57591|megakaryoblastic leukemia (translocation) 1##NM_020831|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF448806|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AB037859|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC064620|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AJ297258|MKL1|57591|megakaryoblastic leukemia (translocation) 1	0.01866	
chr3	141295426	141295547	reg1038285.p2	3.648	+	TSC_hg19_v1_chr3_+_141205882 AK292016 AK301015 AF115573 D78155 D82880 NM_006506	-89615	+	AK311479 TSC_hg19_v1_chr3_+_141105293	-190198	+	TSC_hg19_v1_chr3_+_141087345 AK311501	-208129	+	TSC_hg19_v1_chr3_+_141457045 NM_001201370 NM_014245 NM_183237	161583	+	TSC_hg19_v1_chr3_+_141457129 AK311982	161634	+	TSC_hg19_v1_chr3_+_141457160 BC008627 BC005966 DQ891759 DQ894943 AB590187 AF092878 AF142060 AF312226 AK289894 BT007348	161674	+	AK292016|RASA2|5922|RAS p21 protein activator 2##AK301015|RASA2|5922|RAS p21 protein activator 2##AF115573|RASA2|5922|RAS p21 protein activator 2##D78155|RASA2|5922|RAS p21 protein activator 2##D82880|RASA2|5922|RAS p21 protein activator 2##NM_006506|RASA2|5922|RAS p21 protein activator 2##AK311501|ZBTB38|253461|zinc finger and BTB domain containing 38##NM_001201370|RNF7|9616|ring finger protein 7##NM_014245|RNF7|9616|ring finger protein 7##NM_183237|RNF7|9616|ring finger protein 7##AK311982|RNF7|9616|ring finger protein 7##BC008627|RNF7|9616|ring finger protein 7##BC005966|RNF7|9616|ring finger protein 7##DQ891759|RNF7|9616|ring finger protein 7##DQ894943|RNF7|9616|ring finger protein 7##AF092878|RNF7|9616|ring finger protein 7##AF142060|RNF7|9616|ring finger protein 7##AF312226|RNF7|9616|ring finger protein 7##BT007348|RNF7|9616|ring finger protein 7	0.279309	CTCF.p2:24:0.279
chr3	165178492	165178585	reg1034418.p2	3.648	+	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	-264033	-	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	-382260	-	NM_001080440	-3963943	+	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	376655	-	NM_000055 TSC_hg19_v1_chr3_-_165555283	376729	-	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	1919539	-	BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001080440|OTOL1|131149|otolin 1##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##NM_000055|BCHE|590|butyrylcholinesterase##AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing	0.0	
chr5	128180155	128180286	reg1036301.p1	3.648	+	NM_001999 TSC_hg19_v1_chr5_-_127873939 AF193046	-306379	-	TSC_hg19_v1_chr5_-_127873553 AK300440	-306703	-	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	-760747	+	TSC_hg19_v1_chr5_+_128300789 BC041945	120583	+	TSC_hg19_v1_chr5_+_128301169 BX537383 NM_014031 NM_001017372 AK313456 AL833117	120977	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	250205	+	NM_001999|FBN2|2201|fibrillin 2##AF193046|FBN2|2201|fibrillin 2##AK300440|FBN2|2201|fibrillin 2##AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC041945|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##BX537383|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_014031|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##NM_001017372|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AK313456|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AL833117|SLC27A6|28965|solute carrier family 27 (fatty acid transporter), member 6##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1	0.806059	CTCF.p2:12:0.806
chr5	140904222	140904344	reg1001427.p1	3.648	+	AL050086 TSC_hg19_v1_chr5_-_140895550	-8801	-	TSC_hg19_v1_chr5_+_140868721 BC112081 BC112083 AF152339 AF152526 NM_018929 NM_032407	-35519	+	TSC_hg19_v1_chr5_+_140864626 BC042650 AF152338 AF152525 BC101035 BC101037 BC101038 NM_018928 NM_032406 BC101036	-39599	+	AF051782 AY363395 AB384958 DQ067453 TSC_hg19_v1_chr5_-_140998497 BC117257 BC143413 BC143414	94215	-	TSC_hg19_v1_chr5_-_140998562 AB209482	94278	-	TSC_hg19_v1_chr5_-_140998564 AK304291	94281	-	AL050086|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC112081|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC112083|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152339|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152526|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_018929|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_032407|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF051782|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AY363395|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##DQ067453|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC117257|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143413|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143414|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AB209482|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AK304291|DIAPH1|1729|diaphanous homolog 1 (Drosophila)	0.0	
chr6	110839576	110839693	reg1031060.p2	3.648	+	TSC_hg19_v1_chr6_-_110797837 BC047565 NM_033125	-41771	-	TSC_hg19_v1_chr6_-_110797817 AK304546	-41816	-	BC012014 AF268892 AY145502 BC037247 TSC_hg19_v1_chr6_-_110797794	-41846	-	AK304351 TSC_hg19_v1_chr6_+_111135843	296199	+	BC047513 TSC_hg19_v1_chr6_-_111136246	296584	-	AJ420571 TSC_hg19_v1_chr6_-_111136300	296665	-	BC047565|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##NM_033125|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304546|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC012014|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AF268892|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AY145502|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##BC037247|SLC22A16|85413|solute carrier family 22 (organic cation/carnitine transporter), member 16##AK304351|AMD1|262|adenosylmethionine decarboxylase 1##BC047513|CDK19|23097|cyclin-dependent kinase 19##AJ420571|CDK19|23097|cyclin-dependent kinase 19	0.0	
chr7	66120131	66120229	reg1026659.p4	3.648	+	BC042482 TSC_hg19_v1_chr7_+_66093944 AK056631 AK127790	-26238	+	TSC_hg19_v1_chr7_+_66093867 NM_001167961 NM_153033	-26306	+	TSC_hg19_v1_chr7_-_66057374 BC080520 BC057835 BC067867 AK310548 BC103766 AK310370 AK296922	-62819	-	TSC_hg19_v1_chr7_+_66147121 AK056864	26960	+	NM_014504 TSC_hg19_v1_chr7_+_66205645	85464	+	TSC_hg19_v1_chr7_+_66205692 BC015330	85514	+	BC042482|KCTD7|154881|potassium channel tetramerisation domain containing 7##AK056631|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_001167961|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_153033|KCTD7|154881|potassium channel tetramerisation domain containing 7##AK310548|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##BC103766|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK310370|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK296922|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK056864|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##NM_014504|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##BC015330|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1	0.121874	
chr8	98648515	98648620	reg1043133.p1	3.648	+	TSC_hg19_v1_chr8_-_98290193 AK091445 AX746987	-358348	-	TSC_hg19_v1_chr8_-_98290171 BC045630 NM_033512	-358394	-	CU692280 AB384285 AB051537 TSC_hg19_v1_chr8_-_98290135	-358459	-	TSC_hg19_v1_chr8_+_98656416 BC045642 NM_178812 BC001815	7810	+	TSC_hg19_v1_chr8_+_98656437 BC014977 AF501310	7892	+	BC022825 TSC_hg19_v1_chr8_+_98656510 BC009324 AF411226 AY082966 AY974040	8046	+	AK091445|TSPYL5|85453|TSPY-like 5##BC045630|TSPYL5|85453|TSPY-like 5##NM_033512|TSPYL5|85453|TSPY-like 5##AB051537|TSPYL5|85453|TSPY-like 5##BC045642|MTDH|92140|metadherin##NM_178812|MTDH|92140|metadherin##BC001815|MTDH|92140|metadherin##BC014977|MTDH|92140|metadherin##AF501310|MTDH|92140|metadherin##BC022825|MTDH|92140|metadherin##BC009324|MTDH|92140|metadherin##AF411226|MTDH|92140|metadherin##AY082966|MTDH|92140|metadherin##AY974040|MTDH|92140|metadherin	0.0	
chr9	129568060	129568137	reg1037426.p1	3.648	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	-788	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	-191337	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-478931	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	54846	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	109006	+	AF221098 NM_001190728 AB385313 CU689706	156437	+	NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AF221098|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190728|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	0.0	
chrX	152805288	152805425	reg1003450.p2	3.648	+	NM_001001344 NM_021949 U57971 U60414 BC130009	-3744	+	DQ891898 DQ895084 AB463441 AM392603 AM393683 CU678628 BT007323 AK298756 TSC_hg19_v1_chrX_+_152770289	-35170	+	TSC_hg19_v1_chrX_+_152760466 BC002416 BC004244 J04599 AK223302	-44895	+	BC071851 AB528134 TSC_hg19_v1_chrX_-_152864584 BC001909 BC007232 BC032121	59154	-	TSC_hg19_v1_chrX_-_152864639 NM_001130997 NM_152274	59279	-	TSC_hg19_v1_chrX_+_152907894 AK314250 NM_001395 Y08302	102583	+	NM_001001344|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##NM_021949|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##U57971|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##U60414|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##BC130009|ATP2B3|492|ATPase, Ca++ transporting, plasma membrane 3##DQ891898|BGN|633|biglycan##DQ895084|BGN|633|biglycan##AM392603|BGN|633|biglycan##AM393683|BGN|633|biglycan##BT007323|BGN|633|biglycan##AK298756|BGN|633|biglycan##BC002416|BGN|633|biglycan##BC004244|BGN|633|biglycan##J04599|BGN|633|biglycan##AK223302|BGN|633|biglycan##BC071851|FAM58A|92002|family with sequence similarity 58, member A##BC001909|FAM58A|92002|family with sequence similarity 58, member A##BC007232|FAM58A|92002|family with sequence similarity 58, member A##BC032121|FAM58A|92002|family with sequence similarity 58, member A##NM_001130997|FAM58A|92002|family with sequence similarity 58, member A##NM_152274|FAM58A|92002|family with sequence similarity 58, member A##AK314250|DUSP9|1852|dual specificity phosphatase 9##NM_001395|DUSP9|1852|dual specificity phosphatase 9##Y08302|DUSP9|1852|dual specificity phosphatase 9	0.0	
chr10	112264090	112264271	reg1026146.p2	3.647	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-6429	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-199480	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-199587	-	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	63312	+	AF067163 TSC_hg19_v1_chr10_+_112344155	79935	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	139949	+	NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20	0.0	
chr11	63597483	63597586	reg1043979.p1	3.647	+	TSC_hg19_v1_chr11_+_63581031 BC002782 BC007540 CU691150	-16440	+	BC056402 NM_138471 TSC_hg19_v1_chr11_+_63580927	-16589	+	NM_001144936 TSC_hg19_v1_chr11_-_63536248	-61338	-	TSC_hg19_v1_chr11_+_63606486 AB188493 NM_001039469 NM_001163296 NM_001163297 NM_004954	8892	+	TSC_hg19_v1_chr11_+_63606564 AK225766	9015	+	TSC_hg19_v1_chr11_+_63606599 AK307858	9070	+	BC002782|C11orf84|144097|chromosome 11 open reading frame 84##BC007540|C11orf84|144097|chromosome 11 open reading frame 84##BC056402|C11orf84|144097|chromosome 11 open reading frame 84##NM_138471|C11orf84|144097|chromosome 11 open reading frame 84##NM_001144936|C11orf95|65998|chromosome 11 open reading frame 95##AB188493|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_001039469|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_001163296|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_001163297|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##NM_004954|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK225766|MARK2|2011|MAP/microtubule affinity-regulating kinase 2##AK307858|MARK2|2011|MAP/microtubule affinity-regulating kinase 2	0.029299	
chr1	21815339	21815453	reg1039380.p1	3.647	+	TSC_hg19_v1_chr1_+_21766643 AK299840 AK095602 NM_032264 AK314597 BC024011 AK292580 AL136890	-48714	+	X98272 TSC_hg19_v1_chr1_-_21671998 NM_001113348	-143416	-	Z35307 D49471 HQ258359 TSC_hg19_v1_chr1_-_21616935 AK290656 AK309677 AK296486 BC117256 BC126257 NM_001397	-198462	-	TSC_hg19_v1_chr1_+_21835843 NM_000478 NM_001127501 NM_001177520 AB209814	20463	+	TSC_hg19_v1_chr1_+_21835918 AK295608 AK312667 AK298085 BC021289 BC066116 BC090861 AB011406 AH007388 X95994 AK293184 BC110909	20536	+	AB003930 TSC_hg19_v1_chr1_-_21949064	133641	-	AK299840|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK095602|NBPF3|84224|neuroblastoma breakpoint family, member 3##NM_032264|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK314597|NBPF3|84224|neuroblastoma breakpoint family, member 3##BC024011|NBPF3|84224|neuroblastoma breakpoint family, member 3##AK292580|NBPF3|84224|neuroblastoma breakpoint family, member 3##AL136890|NBPF3|84224|neuroblastoma breakpoint family, member 3##X98272|ECE1|1889|endothelin converting enzyme 1##NM_001113348|ECE1|1889|endothelin converting enzyme 1##Z35307|ECE1|1889|endothelin converting enzyme 1##D49471|ECE1|1889|endothelin converting enzyme 1##HQ258359|ECE1|1889|endothelin converting enzyme 1##AK290656|ECE1|1889|endothelin converting enzyme 1##AK309677|ECE1|1889|endothelin converting enzyme 1##AK296486|ECE1|1889|endothelin converting enzyme 1##BC117256|ECE1|1889|endothelin converting enzyme 1##BC126257|ECE1|1889|endothelin converting enzyme 1##NM_001397|ECE1|1889|endothelin converting enzyme 1##NM_000478|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001127501|ALPL|249|alkaline phosphatase, liver/bone/kidney##NM_001177520|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB209814|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK295608|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK312667|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK298085|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC021289|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC066116|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC090861|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB011406|ALPL|249|alkaline phosphatase, liver/bone/kidney##X95994|ALPL|249|alkaline phosphatase, liver/bone/kidney##AK293184|ALPL|249|alkaline phosphatase, liver/bone/kidney##BC110909|ALPL|249|alkaline phosphatase, liver/bone/kidney##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein	0.0	
chr14	103177791	103177898	reg1041102.p2	3.647	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	-118683	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	-118846	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-201730	-	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	65975	+	TSC_hg19_v1_chr14_+_103243854 AK303172 U15637 BX247977	66056	+	BC029948 NM_030943 TSC_hg19_v1_chr14_+_103388999 AF328788 AY358468	211154	+	AF155595|RCOR1|23186|REST corepressor 1##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3##AK303172|TRAF3|7187|TNF receptor-associated factor 3##U15637|TRAF3|7187|TNF receptor-associated factor 3##BX247977|TRAF3|7187|TNF receptor-associated factor 3##BC029948|AMN|81693|amnionless homolog (mouse)##NM_030943|AMN|81693|amnionless homolog (mouse)##AF328788|AMN|81693|amnionless homolog (mouse)##AY358468|AMN|81693|amnionless homolog (mouse)	0.61027	CTCF.p2:-30:0.610
chr14	68699241	68699328	reg1024541.p1	3.647	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-412764	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-415985	-	AK315462 NM_152443	-530682	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	560436	-	NM_001244698 NM_004926	561346	-	NM_001244701 AB528867	563700	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr16	30375811	30375893	reg1035832.p1	3.647	+	NM_006110 TSC_hg19_v1_chr16_-_30366682	-9170	-	AK315708 TSC_hg19_v1_chr16_-_30366603 BC000495 BC001947 AF104222	-9252	-	BC013854 NM_001243646	-9598	-	TSC_hg19_v1_chr16_-_30381505 AB527435 BC015680 NM_015527	5672	-	AK314082 M21812 X57543 BC012571 BX649054 NM_013292 TSC_hg19_v1_chr16_+_30386122 AF363061	10258	+	NM_001214906 NM_001214907	13781	+	NM_006110|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##AK315708|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##BC000495|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##BC001947|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##AF104222|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##BC013854|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##NM_001243646|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##NM_015527|TBC1D10B|26000|TBC1 domain family, member 10B##AK314082|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##M21812|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##X57543|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##BC012571|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##BX649054|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##NM_013292|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##AF363061|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##NM_001214906|ZNF48|197407|zinc finger protein 48##NM_001214907|ZNF48|197407|zinc finger protein 48	0.831782	CTCF.p2:-4:0.832
chr17	75456225	75456393	reg1031888.p1	3.647	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-8920	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-9527	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	-9664	+	AK056495 NM_001113495	15015	+	TSC_hg19_v1_chr17_+_75543021 AK096234	86711	+	BC039479 NM_001142640 NM_018996	543973	+	AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C	0.0	
chr19	38210713	38210795	reg1040499.p1	3.647	+	TSC_hg19_v1_chr19_-_38210632 AK131557 NM_032689	-97	-	AK131559 NM_001172677	-666	-	TSC_hg19_v1_chr19_-_38188355 BC005085	-22379	-	BC064962 AK074539 NM_001172689 NM_001172690 NM_001172691 NM_001172692 NM_152360	59460	-	TSC_hg19_v1_chr19_+_38307973 AK309685	97255	+	TSC_hg19_v1_chr19_+_38308124 AK092337	97385	+	AK131557|ZNF607|84775|zinc finger protein 607##NM_032689|ZNF607|84775|zinc finger protein 607##AK131559|ZNF607|84775|zinc finger protein 607##NM_001172677|ZNF607|84775|zinc finger protein 607##BC005085|ZNF607|84775|zinc finger protein 607##BC064962|ZNF573|126231|zinc finger protein 573##AK074539|ZNF573|126231|zinc finger protein 573##NM_001172689|ZNF573|126231|zinc finger protein 573##NM_001172690|ZNF573|126231|zinc finger protein 573##NM_001172691|ZNF573|126231|zinc finger protein 573##NM_001172692|ZNF573|126231|zinc finger protein 573##NM_152360|ZNF573|126231|zinc finger protein 573##AK309685|LOC644554|644554|uncharacterized LOC644554##AK092337|LOC644554|644554|uncharacterized LOC644554	0.021057	
chr5	177573376	177573556	reg1001461.p2	3.647	+	TSC_hg19_v1_chr5_+_177558026 BC009911 DQ494789 NM_022762	-15434	+	TSC_hg19_v1_chr5_+_177558014 AK093481 AK094065 AX748156 AX748436 AK125337	-15455	+	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	-32838	+	CR457238 AF401219 TSC_hg19_v1_chr5_-_177580868 AK000486 BC000009 AF161404 AJ293309 BC006387	7391	-	TSC_hg19_v1_chr5_-_177580916 NM_001034833 NM_017838	7470	-	TSC_hg19_v1_chr5_+_177631530 AK097657 NM_004499 NM_031266	58048	+	BC009911|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##DQ494789|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##NM_022762|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK093481|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK094065|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##AK125337|RMND5B|64777|required for meiotic nuclear division 5 homolog B (S. cerevisiae)##BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3##CR457238|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AF401219|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AK000486|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##BC000009|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AF161404|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AJ293309|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##BC006387|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##NM_001034833|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##NM_017838|NHP2|55651|NHP2 ribonucleoprotein homolog (yeast)##AK097657|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##NM_004499|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B##NM_031266|HNRNPAB|3182|heterogeneous nuclear ribonucleoprotein A/B	0.0	
chr5	88168821	88168903	reg1038059.p1	3.647	+	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	-49189	-	TSC_hg19_v1_chr5_-_87980643 AK125167	-188155	-	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	-199717	-	TSC_hg19_v1_chr5_-_88179002 AK312472 L08895 AK307883 BC026341	10144	-	TSC_hg19_v1_chr5_-_88179279 NM_001193350 NM_002397	10423	-	TSC_hg19_v1_chr5_+_88185094 AL050132	16258	+	EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C##AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##AK312472|MEF2C|4208|myocyte enhancer factor 2C##L08895|MEF2C|4208|myocyte enhancer factor 2C##AK307883|MEF2C|4208|myocyte enhancer factor 2C##BC026341|MEF2C|4208|myocyte enhancer factor 2C##NM_001193350|MEF2C|4208|myocyte enhancer factor 2C##NM_002397|MEF2C|4208|myocyte enhancer factor 2C	0.0	
chr8	98800295	98800416	reg1035627.p1	3.647	+	TSC_hg19_v1_chr8_+_98788065 BC031021 AK075326 BC014129 AL136942 AK311377 AX810698 AB528832 AF317417 AM392726 AM393691	-12230	+	AY057051 AY261384 NM_018407 AF527412 TSC_hg19_v1_chr8_+_98787993	-12454	+	AK308030 TSC_hg19_v1_chr8_+_98703378	-96977	+	TSC_hg19_v1_chr8_+_98881340 NM_002380 NM_030583 BC010444 AY358895 AK075489 AL833931 AL137638	80974	+	AB591031 X79238 BC032700 TSC_hg19_v1_chr8_-_99057620	257253	-	L05095 TSC_hg19_v1_chr8_-_99057755	257398	-	BC031021|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK075326|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##BC014129|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AL136942|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK311377|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF317417|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AM392726|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AM393691|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AY057051|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AY261384|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##NM_018407|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AF527412|LAPTM4B|55353|lysosomal protein transmembrane 4 beta##AK308030|MTDH|92140|metadherin##NM_002380|MATN2|4147|matrilin 2##NM_030583|MATN2|4147|matrilin 2##BC010444|MATN2|4147|matrilin 2##AY358895|MATN2|4147|matrilin 2##AK075489|MATN2|4147|matrilin 2##AL833931|MATN2|4147|matrilin 2##AL137638|MATN2|4147|matrilin 2##X79238|RPL30|6156|ribosomal protein L30##BC032700|RPL30|6156|ribosomal protein L30##L05095|RPL30|6156|ribosomal protein L30	0.92398	CTCF.p2:-3:0.924
chr9	124383464	124383551	reg1033125.p1	3.647	+	NM_032552	-54109	+	AF378121 AF378122 AF378123 TSC_hg19_v1_chr9_-_124262101 BC045756	-121418	-	BC010703 TSC_hg19_v1_chr9_-_124132529 AK307999 AK304449 AK304518 AK302977 NM_004099 NM_198194	-250965	-	TSC_hg19_v1_chr9_+_124461442 AF367051	77999	+	AY032952 NM_138709	121556	+	TSC_hg19_v1_chr9_-_124855560 AK125178	472081	-	NM_032552|DAB2IP|153090|DAB2 interacting protein##AF378121|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378122|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378123|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC045756|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC010703|STOM|2040|stomatin##AK307999|STOM|2040|stomatin##AK304449|STOM|2040|stomatin##AK304518|STOM|2040|stomatin##AK302977|STOM|2040|stomatin##NM_004099|STOM|2040|stomatin##NM_198194|STOM|2040|stomatin##AF367051|DAB2IP|153090|DAB2 interacting protein##AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11	0.545856	CTCF.p2:3:0.546
chr1	185489914	185489980	reg1037457.p2	3.646	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-203477	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-203628	-	TSC_hg19_v1_chr1_+_185126418 AK291443	-363551	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	213629	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	775460	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	854310	-	NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)	0.0	
chr1	228666698	228666837	reg1030237.p1	3.646	+	AK091220 NM_175055 BC100855 BC100856 BC100857 BC100858 BC137467 BC137468	-20960	+	AB590632 BC082269 BC001193 NM_033445 AK311930 TSC_hg19_v1_chr1_-_228645575	-21221	-	BC069079 CR542013 NM_003493 AK312217 BC101837 BC101839	-53718	-	TSC_hg19_v1_chr1_+_228675088 NM_001010858 BC012758	8308	+	AK055963 TSC_hg19_v1_chr1_+_228783500	116664	+	TSC_hg19_v1_chr1_+_228870806 NM_021205 AF211836	204077	+	AK091220|HIST3H2BB|128312|histone cluster 3, H2bb##NM_175055|HIST3H2BB|128312|histone cluster 3, H2bb##BC100855|HIST3H2BB|128312|histone cluster 3, H2bb##BC100856|HIST3H2BB|128312|histone cluster 3, H2bb##BC100857|HIST3H2BB|128312|histone cluster 3, H2bb##BC100858|HIST3H2BB|128312|histone cluster 3, H2bb##BC137467|HIST3H2BB|128312|histone cluster 3, H2bb##BC137468|HIST3H2BB|128312|histone cluster 3, H2bb##BC082269|HIST3H2A|92815|histone cluster 3, H2a##BC001193|HIST3H2A|92815|histone cluster 3, H2a##NM_033445|HIST3H2A|92815|histone cluster 3, H2a##AK311930|HIST3H2A|92815|histone cluster 3, H2a##BC069079|HIST3H3|8290|histone cluster 3, H3##CR542013|HIST3H3|8290|histone cluster 3, H3##NM_003493|HIST3H3|8290|histone cluster 3, H3##AK312217|HIST3H3|8290|histone cluster 3, H3##BC101837|HIST3H3|8290|histone cluster 3, H3##BC101839|HIST3H3|8290|histone cluster 3, H3##NM_001010858|RNF187|149603|ring finger protein 187##BC012758|RNF187|149603|ring finger protein 187##AK055963|DUSP5P|574029|dual specificity phosphatase 5 pseudogene##NM_021205|RHOU|58480|ras homolog gene family, member U##AF211836|RHOU|58480|ras homolog gene family, member U	0.0	
chr20	47805109	47805290	reg1037386.p2	3.646	+	AF061938 AF061939 AF061940 AF061941 AY546099 NM_001037328 NM_004602 NM_017452 NM_017453 NM_017454 TSC_hg19_v1_chr20_-_47804905	-286	-	TSC_hg19_v1_chr20_-_47804876 AK292859 BC001893 BC010169 AY529074 AK291487 BC007532 AK057739 AK025519 BC095397 AL136601	-413	-	TSC_hg19_v1_chr20_+_47662875 AF053640	-142311	+	NM_017895 BC126287 BC130275 BC144125 BC104480 HQ258508 AY044431 AL832131 EU718675 TSC_hg19_v1_chr20_+_47835952 AK300135	30693	+	TSC_hg19_v1_chr20_+_47835954 AK022979	30759	+	TSC_hg19_v1_chr20_+_47835964 BC009304 BC011927 BC016060 HQ258546	30775	+	AF061938|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061939|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061940|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF061941|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AY546099|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_001037328|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_004602|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017452|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017453|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##NM_017454|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK292859|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC001893|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC010169|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AY529074|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK291487|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC007532|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK057739|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AK025519|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##BC095397|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AL136601|STAU1|6780|staufen, RNA binding protein, homolog 1 (Drosophila)##AF053640|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##NM_017895|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC126287|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC130275|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC144125|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC104480|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##HQ258508|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AY044431|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AL832131|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##EU718675|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AK300135|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##AK022979|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC009304|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC011927|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##BC016060|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27##HQ258546|DDX27|55661|DEAD (Asp-Glu-Ala-Asp) box polypeptide 27	0.0	
chr20	57225894	57226074	reg1019128.p2	3.646	+	BC101758 BC101760 AK074647 NM_153360 AK293299	-136086	-	AK124571 TSC_hg19_v1_chr20_+_57022525	-203492	+	TSC_hg19_v1_chr20_+_56964291 BC001712 AF086628 AF086629 AK298036 AK127252 AB529043 CU674842 BT009811	-261530	+	TSC_hg19_v1_chr20_+_57226338 AK316547 NM_001001433 NM_001134772 NM_001134773 NM_001204868 NM_003763 AK304867 AB209296	404	+	TSC_hg19_v1_chr20_+_57226873 BC019042 AF008935 AF008936 AF008937 BC073876 AF038897 AF428146 AK026970	1007	+	NM_001204872 NM_001204873 AK297667 AK307771	38204	+	BC101758|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##BC101760|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK074647|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##NM_153360|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK293299|APCDD1L|164284|adenomatosis polyposis coli down-regulated 1-like##AK124571|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BC001712|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086628|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AF086629|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK298036|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK127252|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##BT009811|VAPB|9217|VAMP (vesicle-associated membrane protein)-associated protein B and C##AK316547|STX16|8675|syntaxin 16##NM_001001433|STX16|8675|syntaxin 16##NM_001134772|STX16|8675|syntaxin 16##NM_001134773|STX16|8675|syntaxin 16##NM_001204868|STX16|8675|syntaxin 16##NM_003763|STX16|8675|syntaxin 16##AK304867|STX16|8675|syntaxin 16##AB209296|STX16-NPEPL1|100534593|STX16-NPEPL1 readthrough (non-protein coding)##BC019042|STX16|8675|syntaxin 16##AF008935|STX16|8675|syntaxin 16##AF008936|STX16|8675|syntaxin 16##AF008937|STX16|8675|syntaxin 16##BC073876|STX16|8675|syntaxin 16##AF038897|STX16|8675|syntaxin 16##AF428146|STX16|8675|syntaxin 16##AK026970|STX16|8675|syntaxin 16##NM_001204872|NPEPL1|79716|aminopeptidase-like 1##NM_001204873|NPEPL1|79716|aminopeptidase-like 1##AK297667|NPEPL1|79716|aminopeptidase-like 1##AK307771|NPEPL1|79716|aminopeptidase-like 1	0.015426	
chr21	41515831	41515957	reg1029521.p1	3.646	+	NM_006198 U52969 AK289964 BC013791 X93349 AF416716 AM183336	-276517	+	AK092516 AX747579 NM_001080444 AB528819	-398510	+	AB020337 NM_006057 NM_033170 NM_033171 NM_033172 NM_033173	-486641	+	AB384859 AB209136 TSC_hg19_v1_chr21_-_42218650	702724	-	AF023450 NM_001389 AF217525	703157	-	AF178532 AF188276 AF188277 NM_012105 NM_138991 NM_138992	1023833	+	NM_006198|PCP4|5121|Purkinje cell protein 4##U52969|PCP4|5121|Purkinje cell protein 4##AK289964|PCP4|5121|Purkinje cell protein 4##BC013791|PCP4|5121|Purkinje cell protein 4##X93349|PCP4|5121|Purkinje cell protein 4##AF416716|PCP4|5121|Purkinje cell protein 4##AM183336|PCP4|5121|Purkinje cell protein 4##AK092516|IGSF5|150084|immunoglobulin superfamily, member 5##NM_001080444|IGSF5|150084|immunoglobulin superfamily, member 5##AB020337|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_006057|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033170|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033171|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033172|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##NM_033173|B3GALT5|10317|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5##AB209136|DSCAM|1826|Down syndrome cell adhesion molecule##AF023450|DSCAM|1826|Down syndrome cell adhesion molecule##NM_001389|DSCAM|1826|Down syndrome cell adhesion molecule##AF217525|DSCAM|1826|Down syndrome cell adhesion molecule##AF178532|BACE2|25825|beta-site APP-cleaving enzyme 2##AF188276|BACE2|25825|beta-site APP-cleaving enzyme 2##AF188277|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_012105|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_138991|BACE2|25825|beta-site APP-cleaving enzyme 2##NM_138992|BACE2|25825|beta-site APP-cleaving enzyme 2	0.977139	CTCF.p2:59:0.977
chr2	179808871	179808959	reg1035288.p2	3.646	+	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-136812	-	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	-149214	-	TSC_hg19_v1_chr2_+_179387947 AK093733	-420955	+	AL832777 NM_173648	105870	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	320490	-	AK057999 NM_001113398	618399	-	X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##X98114|TTN|7273|titin##X98115|TTN|7273|titin##AK093733|LOC100506866|100506866|uncharacterized LOC100506866##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B	0.0	
chr2	197296835	197296946	reg1043233.p1	3.646	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-260572	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-260611	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-363395	-	BC117194 BC117198 AB037722 NM_020760	160402	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	207467	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	367523	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.952259	CTCF.p2:-2:0.952
chr22	34315468	34315617	reg1033921.p2	3.646	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-861187	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-912816	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-1117790	+	AJ007583 AB011181 NM_004737 NM_133642	828	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1146607	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1337934	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr2	9563518	9563609	reg1037890.p1	3.646	+	TSC_hg19_v1_chr2_-_9563308 AK093179	-221	-	TSC_hg19_v1_chr2_+_9346940 BC063308	-216604	+	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	-216671	+	AK092115 AX747361 TSC_hg19_v1_chr2_-_9563586	22	-	TSC_hg19_v1_chr2_-_9563587 BC012264 AK299017 AK289817 BX647099 AF012023 AF012024 NM_004763 NM_022334	51	-	TSC_hg19_v1_chr2_+_9563779 BC030988	217	+	AK093179|ITGB1BP1|9270|integrin beta 1 binding protein 1##BC063308|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AK092115|ITGB1BP1|9270|integrin beta 1 binding protein 1##BC012264|ITGB1BP1|9270|integrin beta 1 binding protein 1##AK299017|ITGB1BP1|9270|integrin beta 1 binding protein 1##AK289817|ITGB1BP1|9270|integrin beta 1 binding protein 1##BX647099|ITGB1BP1|9270|integrin beta 1 binding protein 1##AF012023|ITGB1BP1|9270|integrin beta 1 binding protein 1##AF012024|ITGB1BP1|9270|integrin beta 1 binding protein 1##NM_004763|ITGB1BP1|9270|integrin beta 1 binding protein 1##NM_022334|ITGB1BP1|9270|integrin beta 1 binding protein 1##BC030988|CPSF3|51692|cleavage and polyadenylation specific factor 3, 73kDa	0.0	
chr4	38107140	38107289	reg1032903.p1	3.646	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-128197	+	AF095288 BC069114 BC069400 NM_006607	-145159	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-214425	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	558612	+	AF289565 TSC_hg19_v1_chr4_-_38666549	559275	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	677385	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr7	104950021	104950087	reg1047048.p1	3.646	+	BC035214 TSC_hg19_v1_chr7_-_104909496 U88666 NM_182691	-40571	-	TSC_hg19_v1_chr7_+_104752313 AY222296 AY438698	-197676	+	TSC_hg19_v1_chr7_+_104681423 AY157990	-268640	+	TSC_hg19_v1_chr7_-_105029265 AB489157	79211	-	TSC_hg19_v1_chr7_-_105029346 NM_182692	79288	-	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	212607	-	BC035214|SRPK2|6733|SRSF protein kinase 2##U88666|SRPK2|6733|SRSF protein kinase 2##NM_182691|SRPK2|6733|SRSF protein kinase 2##AY222296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY438698|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY157990|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##NM_182692|SRPK2|6733|SRSF protein kinase 2##BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	0.0	
chr7	145545941	145546048	reg1040500.p1	3.646	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-1012858	-	TSC_hg19_v1_chr7_-_144533086 AK091736	-1012905	-	NM_001080413 AB528776	-1438675	-	NM_014141	267458	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	267890	+	TSC_hg19_v1_chr7_+_148036552 CR933671	2490571	+	AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##AK091736|TPK1|27010|thiamin pyrophosphokinase 1##NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##CR933671|CNTNAP2|26047|contactin associated protein-like 2	0.997443	CTCF.p2:-2:0.997
chr8	129027129	129027204	reg1035175.p2	3.646	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-220383	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-278676	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-278841	+	AB042405 NM_031415	1771967	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1924749	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1924840	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr10	3800457	3800625	reg1027394.p2	3.645	+	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-585536	-	CU678866 TSC_hg19_v1_chr10_-_3214975 AB384562 BC005025 AK225084 AK293788 AK315117 AK294865 AK299464 AK303406 BC095422 BX649017 AF061243	-585571	-	BC045577 TSC_hg19_v1_chr10_-_3214936	-585616	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	26770	-	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	26968	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1067877	+	BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC005025|PITRM1|10531|pitrilysin metallopeptidase 1##AK225084|PITRM1|10531|pitrilysin metallopeptidase 1##AK293788|PITRM1|10531|pitrilysin metallopeptidase 1##AK315117|PITRM1|10531|pitrilysin metallopeptidase 1##AK294865|PITRM1|10531|pitrilysin metallopeptidase 1##AK299464|PITRM1|10531|pitrilysin metallopeptidase 1##AK303406|PITRM1|10531|pitrilysin metallopeptidase 1##BC095422|PITRM1|10531|pitrilysin metallopeptidase 1##BX649017|PITRM1|10531|pitrilysin metallopeptidase 1##AF061243|PITRM1|10531|pitrilysin metallopeptidase 1##BC045577|PITRM1|10531|pitrilysin metallopeptidase 1##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2	0.0	
chr1	234987505	234987599	reg1038488.p1	3.645	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-91778	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-242306	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-243694	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	304537	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	304679	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	337011	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr13	31318464	31318623	reg1029888.p1	3.645	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	-8828	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	-8879	+	AK314143 NM_001204406	-30929	+	NM_032849 AK055635 TSC_hg19_v1_chr13_+_31480407 AL832478 BC040165 BC101624 BC101626 CU691826	161937	+	TSC_hg19_v1_chr13_+_31506809 BC030277 NM_152325 CU688876	188287	+	CU691504 DQ891727 DQ894904 AF039695 TSC_hg19_v1_chr13_-_31735849	417251	-	BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_032849|C13orf33|84935|chromosome 13 open reading frame 33##AK055635|C13orf33|84935|chromosome 13 open reading frame 33##BC040165|C13orf33|84935|chromosome 13 open reading frame 33##BC101624|C13orf33|84935|chromosome 13 open reading frame 33##BC101626|C13orf33|84935|chromosome 13 open reading frame 33##BC030277|C13orf26|122046|chromosome 13 open reading frame 26##NM_152325|C13orf26|122046|chromosome 13 open reading frame 26##DQ891727|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ894904|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AF039695|HSPH1|10808|heat shock 105kDa/110kDa protein 1	0.0	
chr1	34885440	34885520	reg1033477.p1	3.645	+	NM_001134734	-242928	+	AK123355 NM_032884 BC007637	-252881	+	AY210418 NM_052896	-254038	-	AK129509 BC004379 NM_005268	335203	+	AK057628 NM_153212	339861	+	AK026139 NM_024009 TSC_hg19_v1_chr1_+_35246807	361326	+	NM_001134734|C1orf94|84970|chromosome 1 open reading frame 94##AK123355|C1orf94|84970|chromosome 1 open reading frame 94##NM_032884|C1orf94|84970|chromosome 1 open reading frame 94##BC007637|C1orf94|84970|chromosome 1 open reading frame 94##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2##AK129509|GJB5|2709|gap junction protein, beta 5, 31.1kDa##BC004379|GJB5|2709|gap junction protein, beta 5, 31.1kDa##NM_005268|GJB5|2709|gap junction protein, beta 5, 31.1kDa##AK057628|GJB4|127534|gap junction protein, beta 4, 30.3kDa##NM_153212|GJB4|127534|gap junction protein, beta 4, 30.3kDa##AK026139|GJB3|2707|gap junction protein, beta 3, 31kDa##NM_024009|GJB3|2707|gap junction protein, beta 3, 31kDa	0.164672	
chr1	58624842	58624959	reg1035710.p2	3.645	+	TSC_hg19_v1_chr1_-_57888785 AK313144	-736072	-	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	-1193184	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	-1304392	+	TSC_hg19_v1_chr1_-_58716179 CR933698 AB210012	91282	-	TSC_hg19_v1_chr1_-_58716210 AK095513 NM_021080	91309	-	TSC_hg19_v1_chr1_-_59012387 AF263547 NM_145243 AB048348 BC012915 AK308847	387523	-	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##CR933698|DAB1|1600|disabled homolog 1 (Drosophila)##AB210012|DAB1|1600|disabled homolog 1 (Drosophila)##AK095513|DAB1|1600|disabled homolog 1 (Drosophila)##NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)##NM_145243|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AB048348|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BC012915|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AK308847|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)	0.0	
chr16	16044397	16044529	reg1038637.p1	3.645	+	TSC_hg19_v1_chr16_+_16043442 L05628 NM_004996 NM_019862 NM_019898 NM_019899 NM_019900 X78338	-1099	+	AL832498 TSC_hg19_v1_chr16_-_15982471	-61978	-	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	-62010	-	TSC_hg19_v1_chr16_+_16146613 HQ917065	102155	+	AF168791 AM711638 AM774324 BC050733 AF076622 BC131732 U66689 NM_001079528 NM_001171 AY078405 AK298295	272857	-	TSC_hg19_v1_chr16_+_16326401 NM_001004067	281934	+	L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##AL832498|FOPNL|123811|FGFR1OP N-terminal like##AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##AF168791|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM711638|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM774324|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC050733|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AF076622|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC131732|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001079528|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001171|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AY078405|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AK298295|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001004067|NOMO3|408050|NODAL modulator 3	0.0	
chr17	20799604	20799752	reg1039370.p2	3.645	+	CU686685 BC068597 NM_001004306	-286	-	AK057473 TSC_hg19_v1_chr17_+_20771859 BC041488 EF565107	-27873	+	NM_001190790	-316642	+	TSC_hg19_v1_chr17_-_20946322 AB590105 AB028986 NM_015276	146594	-	TSC_hg19_v1_chr17_+_20978860 AB593144	179203	+	TSC_hg19_v1_chr17_+_21030251 NM_015510 AL117567 AF151851 BC004126 BC009679 AK124055 CR457124	230598	+	BC068597|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001004306|CCDC144NL|339184|coiled-coil domain containing 144 family, N-terminal like##NM_001190790|CDRT15L2|256223|CMT1A duplicated region transcript 15-like 2##AB028986|USP22|23326|ubiquitin specific peptidase 22##NM_015276|USP22|23326|ubiquitin specific peptidase 22##NM_015510|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AL117567|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AF151851|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC004126|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##BC009679|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##AK124055|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B##CR457124|DHRS7B|25979|dehydrogenase/reductase (SDR family) member 7B	0.691553	CTCF.p2:-65:0.692
chr20	52543063	52543208	reg1028961.p1	3.645	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-332336	-	AF041259 NM_006526	-343500	-	AK302570 NM_001193421	-741314	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	143927	-	AK315220 NM_003657	144168	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	247385	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr2	153599654	153599778	reg1037492.p2	3.645	+	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-24572	+	BC028741 TSC_hg19_v1_chr2_+_153575133	-24585	+	TSC_hg19_v1_chr2_+_153575123 AK315657	-24601	+	AK311958 BC002908 AK074808 AB043585 NM_019845	735535	-	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	1128728	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	1955473	+	BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##BC028741|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK315657|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	0.014092	
chr22	26145562	26145683	reg1034700.p2	3.645	+	TSC_hg19_v1_chr22_+_26138168 AY077700	-7438	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	-7502	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-184676	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	419815	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	419875	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	420041	+	AY077700|MYO18B|84700|myosin XVIIIB##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.078403	
chr22	26975348	26975506	reg1040800.p2	3.645	+	AK075139 NM_001008566	-14076	-	TSC_hg19_v1_chr22_+_26908507 AK057443	-66934	+	TSC_hg19_v1_chr22_-_26908440 AK025443 AK299964 BC011599 BC033080 AL080147 NM_001008697 NM_012143 AK298303 AL050258	-67034	-	TSC_hg19_v1_chr22_-_26986052 AF049891 BC017509	10624	-	TSC_hg19_v1_chr22_-_26986070 AK304545 BC001057 AL136623	10640	-	TSC_hg19_v1_chr22_-_26986083 AK074538 NM_003595	10653	-	AK075139|TPST2|8459|tyrosylprotein sulfotransferase 2##NM_001008566|TPST2|8459|tyrosylprotein sulfotransferase 2##AK025443|TFIP11|24144|tuftelin interacting protein 11##AK299964|TFIP11|24144|tuftelin interacting protein 11##BC011599|TFIP11|24144|tuftelin interacting protein 11##BC033080|TFIP11|24144|tuftelin interacting protein 11##AL080147|TFIP11|24144|tuftelin interacting protein 11##NM_001008697|TFIP11|24144|tuftelin interacting protein 11##NM_012143|TFIP11|24144|tuftelin interacting protein 11##AK298303|TFIP11|24144|tuftelin interacting protein 11##AL050258|TFIP11|24144|tuftelin interacting protein 11##AF049891|TPST2|8459|tyrosylprotein sulfotransferase 2##BC017509|TPST2|8459|tyrosylprotein sulfotransferase 2##AK304545|TPST2|8459|tyrosylprotein sulfotransferase 2##BC001057|TPST2|8459|tyrosylprotein sulfotransferase 2##AL136623|TPST2|8459|tyrosylprotein sulfotransferase 2##AK074538|TPST2|8459|tyrosylprotein sulfotransferase 2##NM_003595|TPST2|8459|tyrosylprotein sulfotransferase 2	0.0	
chr3	127400841	127400939	reg1046393.p2	3.645	+	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-9073	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-52858	+	TSC_hg19_v1_chr3_+_127317274 D21063 BC006165 BC007938 BC017490	-83606	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	140540	-	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	141252	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	233428	+	NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##D21063|MCM2|4171|minichromosome maintenance complex component 2##BC006165|MCM2|4171|minichromosome maintenance complex component 2##BC007938|MCM2|4171|minichromosome maintenance complex component 2##BC017490|MCM2|4171|minichromosome maintenance complex component 2##CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.0	
chr5	60495495	60495675	reg1040836.p1	3.645	+	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	-37318	-	BC146876 BC146881 BC014242 BC047489 TSC_hg19_v1_chr5_-_60458209	-37407	-	TSC_hg19_v1_chr5_+_60241003 AK026051 NM_174889 AF087990 AK291296 BC001753 BC070357 BC033965 AB183433	-254573	+	TSC_hg19_v1_chr5_+_60628085 NM_020928	132513	+	AK094862 NM_173667	438050	+	TSC_hg19_v1_chr5_+_61601970 NM_001098511 NM_001243952 NM_001243953 NM_004520	1106388	+	BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##BC146876|C5orf43|643155|chromosome 5 open reading frame 43##BC146881|C5orf43|643155|chromosome 5 open reading frame 43##BC014242|C5orf43|643155|chromosome 5 open reading frame 43##BC047489|C5orf43|643155|chromosome 5 open reading frame 43##AK026051|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_174889|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AF087990|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AK291296|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC001753|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC070357|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC033965|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AB183433|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6##AK094862|C5orf64|285668|chromosome 5 open reading frame 64##NM_173667|C5orf64|285668|chromosome 5 open reading frame 64##NM_001098511|KIF2A|3796|kinesin heavy chain member 2A##NM_001243952|KIF2A|3796|kinesin heavy chain member 2A##NM_001243953|KIF2A|3796|kinesin heavy chain member 2A##NM_004520|KIF2A|3796|kinesin heavy chain member 2A	0.0	
chr5	66712109	66712267	reg1040089.p1	3.645	+	BC109069 BC109070 D83597 NM_005582 AK313177	-219588	-	AY830839 BC018692 NM_015183	-587585	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-819980	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	799392	+	TSC_hg19_v1_chr5_+_67511602 BC094795	799419	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	872106	+	BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.0	
chr7	25989216	25989397	reg1035503.p1	3.645	+	AB040290 AF330057 AF440392 NM_022150	-721226	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-769435	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-824366	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	202627	+	TSC_hg19_v1_chr7_-_26232151 BX538099	242845	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	251035	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.0	
chr9	77555647	77555747	reg1035100.p2	3.645	+	AF350881 AK057748 NM_017662	-52688	-	AY333283 NM_001177310 AF448232 AY333282 AY333285 AY333286 AY333287 AY333288	-52963	-	AY333284 NM_001177311	-53435	-	BC039588 TSC_hg19_v1_chr9_-_77567803 AK225349 AK000972 NM_017998	12076	-	TSC_hg19_v1_chr9_-_77643032 BX647386	87373	-	CU689816 EU832520 EU832602 TSC_hg19_v1_chr9_-_77643174	87468	-	AF350881|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AK057748|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_017662|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333283|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177310|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AF448232|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333282|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333285|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333286|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333287|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333288|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##AY333284|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##NM_001177311|TRPM6|140803|transient receptor potential cation channel, subfamily M, member 6##BC039588|C9orf40|55071|chromosome 9 open reading frame 40##AK225349|C9orf40|55071|chromosome 9 open reading frame 40##AK000972|C9orf40|55071|chromosome 9 open reading frame 40##NM_017998|C9orf40|55071|chromosome 9 open reading frame 40##BX647386|C9orf41|138199|chromosome 9 open reading frame 41##EU832520|C9orf41|138199|chromosome 9 open reading frame 41##EU832602|C9orf41|138199|chromosome 9 open reading frame 41	0.169542	
chrX	49042878	49042996	reg1033164.p1	3.645	+	TSC_hg19_v1_chrX_-_49042854 AK299407	-83	-	TSC_hg19_v1_chrX_-_49042840 BT007423 CR457211 DQ891474 DQ894662 AB464065 AJ011654 NM_006150 AK300866 AK314788 BC002468 BC016856	-147	-	NM_002668 TSC_hg19_v1_chrX_+_49028254 L09604 BC109066 AB591027	-14674	+	TSC_hg19_v1_chrX_+_49047887 CU687901	4953	+	TSC_hg19_v1_chrX_-_49056653 AB464258 CU687900 AK313030 AK094376 AK295524 AK315953 BC064550 NM_003179	13745	-	AF067227 JF701915 AF201304 AJ224874 NM_005183	46864	-	AK299407|PRICKLE3|4007|prickle homolog 3 (Drosophila)##BT007423|PRICKLE3|4007|prickle homolog 3 (Drosophila)##CR457211|PRICKLE3|4007|prickle homolog 3 (Drosophila)##DQ891474|PRICKLE3|4007|prickle homolog 3 (Drosophila)##DQ894662|PRICKLE3|4007|prickle homolog 3 (Drosophila)##AJ011654|PRICKLE3|4007|prickle homolog 3 (Drosophila)##NM_006150|PRICKLE3|4007|prickle homolog 3 (Drosophila)##AK300866|PRICKLE3|4007|prickle homolog 3 (Drosophila)##AK314788|PRICKLE3|4007|prickle homolog 3 (Drosophila)##BC002468|PRICKLE3|4007|prickle homolog 3 (Drosophila)##BC016856|PRICKLE3|4007|prickle homolog 3 (Drosophila)##NM_002668|PLP2|5355|proteolipid protein 2 (colonic epithelium-enriched)##L09604|PLP2|5355|proteolipid protein 2 (colonic epithelium-enriched)##BC109066|PLP2|5355|proteolipid protein 2 (colonic epithelium-enriched)##AK313030|SYP|6855|synaptophysin##AK094376|SYP|6855|synaptophysin##AK295524|SYP|6855|synaptophysin##AK315953|SYP|6855|synaptophysin##BC064550|SYP|6855|synaptophysin##NM_003179|SYP|6855|synaptophysin##AF067227|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##JF701915|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##AF201304|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##AJ224874|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit##NM_005183|CACNA1F|778|calcium channel, voltage-dependent, L type, alpha 1F subunit	0.0	
chr10	3930399	3930505	reg1028498.p2	3.644	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-102943	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-103141	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-715447	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	937966	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1075062	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1075171	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.534333	CTCF.p2:35:0.534
chr12	129282056	129282236	reg1037249.p2	3.644	+	NM_001136103	-530199	+	NM_052907	-3470985	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-3732078	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	26297	-	BC043528 TSC_hg19_v1_chr12_+_129337985	55838	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	55941	+	NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.015901	
chr16	12750785	12750851	reg1028911.p1	3.644	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-680245	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-691734	+	NM_001130007	-740300	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	146833	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	146901	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	244650	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr16	28989165	28989285	reg1033220.p1	3.644	+	TSC_hg19_v1_chr16_+_28986106 BC038961 NM_001142448 NM_001142449 NM_001142450 NM_001142451 NM_032038 AK095677 AK289787 BC065235 AF370423 BC047741 AB209402 AL390215 AF212371 BC008325 AM392778 AM393748 AB528362 CU678917 BC006156	-2971	+	BC068007 BC101741 BC112182 TSC_hg19_v1_chr16_+_28962327 AF458593 NM_032815 AK074761 AK304172	-26987	+	NM_001178098 NM_001770 BC006338 AK301363 AK313577 BC052294 M21097 X13312 AK307295 M28170 DQ893016 DQ896261 AK130657 AK301167 AK304456	-45923	+	BC011563 NM_001014989	6921	+	AK307342 NM_001014987 NM_001014988 NM_014387 TSC_hg19_v1_chr16_+_28996403 AJ223280	7173	+	TSC_hg19_v1_chr16_+_29086310 BC042920 AK225670 AK298442 AK301253	97080	+	BC038961|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142448|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142449|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142450|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_001142451|SPNS1|83985|spinster homolog 1 (Drosophila)##NM_032038|SPNS1|83985|spinster homolog 1 (Drosophila)##AK095677|SPNS1|83985|spinster homolog 1 (Drosophila)##AK289787|SPNS1|83985|spinster homolog 1 (Drosophila)##BC065235|SPNS1|83985|spinster homolog 1 (Drosophila)##AF370423|SPNS1|83985|spinster homolog 1 (Drosophila)##BC047741|SPNS1|83985|spinster homolog 1 (Drosophila)##AL390215|SPNS1|83985|spinster homolog 1 (Drosophila)##AF212371|SPNS1|83985|spinster homolog 1 (Drosophila)##BC008325|SPNS1|83985|spinster homolog 1 (Drosophila)##AM392778|SPIN1|10927|spindlin 1##AM393748|SPIN1|10927|spindlin 1##BC006156|SPNS1|83985|spinster homolog 1 (Drosophila)##BC068007|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC101741|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC112182|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AF458593|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##NM_032815|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK074761|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK304172|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##NM_001178098|CD19|930|CD19 molecule##NM_001770|CD19|930|CD19 molecule##BC006338|CD19|930|CD19 molecule##AK301363|CD19|930|CD19 molecule##AK313577|CD19|930|CD19 molecule##BC052294|CD19|930|CD19 molecule##M21097|CD19|930|CD19 molecule##X13312|CD19|930|CD19 molecule##AK307295|CD19|930|CD19 molecule##DQ893016|CD19|930|CD19 molecule##DQ896261|CD19|930|CD19 molecule##AK130657|CD19|930|CD19 molecule##AK301167|CD19|930|CD19 molecule##AK304456|CD19|930|CD19 molecule##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells##AK307342|LAT|27040|linker for activation of T cells##NM_001014987|LAT|27040|linker for activation of T cells##NM_001014988|LAT|27040|linker for activation of T cells##NM_014387|LAT|27040|linker for activation of T cells##AJ223280|LAT|27040|linker for activation of T cells##AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2	0.96533	CTCF.p2:0:0.965
chr18	29091295	29091431	reg1039772.p1	3.644	+	NM_001943 TSC_hg19_v1_chr18_+_29078205 BC099655 BC099656 BC099657 Z26317 AK308408	-13220	+	AK290367 NM_001944 M76482	-63619	+	AY177664 NM_001134453 NM_177986 AY168788 AY228236 BC132907 BC132909 AY227350	-134557	+	NM_000371 TSC_hg19_v1_chr18_+_29171839 AK312051 BC005310 BC020791 D00096 GU727633 K02091 M10605 X59498 AF162690 BT007189 CR456908 DQ778081 DQ839490 U19780	80434	+	AB024742 BC074835 BC074884 BC069620 BC069642 AF069054 AK314860 AF097159 NM_004775	173176	-	BC103999 BC104000 BC104001 AK302337 NM_001034172	249407	-	NM_001943|DSG2|1829|desmoglein 2##BC099655|DSG2|1829|desmoglein 2##BC099656|DSG2|1829|desmoglein 2##BC099657|DSG2|1829|desmoglein 2##Z26317|DSG2|1829|desmoglein 2##AK308408|DSG2|1829|desmoglein 2##AK290367|DSG3|1830|desmoglein 3##NM_001944|DSG3|1830|desmoglein 3##M76482|DSG3|1830|desmoglein 3##AY177664|DSG4|147409|desmoglein 4##NM_001134453|DSG4|147409|desmoglein 4##NM_177986|DSG4|147409|desmoglein 4##AY168788|DSG4|147409|desmoglein 4##AY228236|DSG4|147409|desmoglein 4##BC132907|DSG4|147409|desmoglein 4##BC132909|DSG4|147409|desmoglein 4##AY227350|DSG4|147409|desmoglein 4##NM_000371|TTR|7276|transthyretin##AK312051|TTR|7276|transthyretin##BC005310|TTR|7276|transthyretin##BC020791|TTR|7276|transthyretin##D00096|TTR|7276|transthyretin##GU727633|TTR|7276|transthyretin##K02091|TTR|7276|transthyretin##M10605|TTR|7276|transthyretin##X59498|TTR|7276|transthyretin##AF162690|TTR|7276|transthyretin##BT007189|TTR|7276|transthyretin##CR456908|TTR|7276|transthyretin##DQ839490|TTR|7276|transthyretin##U19780|TTR|7276|transthyretin##AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC103999|MCART2|147407|mitochondrial carrier triple repeat 2##BC104000|MCART2|147407|mitochondrial carrier triple repeat 2##BC104001|MCART2|147407|mitochondrial carrier triple repeat 2##AK302337|MCART2|147407|mitochondrial carrier triple repeat 2##NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2	0.623605	CTCF.p2:-107:0.624
chr1	86078686	86078753	reg1020899.p1	3.644	+	TSC_hg19_v1_chr1_+_86046443 AK223385 AK295430 AK314571 NM_001554 BC016952 Y12084 Z98053 Y11307 BC009199 U62015 BC001271 AF003594 AF031385 DQ891262 DQ894449 AB587390 CR536519 CU677777	-32168	+	BX648145 NM_001134445 AK304876	-34729	-	TSC_hg19_v1_chr1_-_85930843 BC033680 AK312432 NM_012137	-147779	-	EU446811 AK000767 TSC_hg19_v1_chr1_-_86174035 BC110898 AK314566	95287	-	TSC_hg19_v1_chr1_-_86174088 AL442074 BC026236 AK298149 NM_001170670 NM_017953	95394	-	BC116180 BC113654 BC117170 BC143715 BC143717 BC143718 AY244357 NM_152890	543394	-	AK223385|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AK295430|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AK314571|CYR61|3491|cysteine-rich, angiogenic inducer, 61##NM_001554|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC016952|CYR61|3491|cysteine-rich, angiogenic inducer, 61##Y12084|CYR61|3491|cysteine-rich, angiogenic inducer, 61##Z98053|CYR61|3491|cysteine-rich, angiogenic inducer, 61##Y11307|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC009199|CYR61|3491|cysteine-rich, angiogenic inducer, 61##U62015|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BC001271|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AF003594|CYR61|3491|cysteine-rich, angiogenic inducer, 61##AF031385|CYR61|3491|cysteine-rich, angiogenic inducer, 61##DQ891262|CYR61|3491|cysteine-rich, angiogenic inducer, 61##DQ894449|CYR61|3491|cysteine-rich, angiogenic inducer, 61##CR536519|CYR61|3491|cysteine-rich, angiogenic inducer, 61##BX648145|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##NM_001134445|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##AK304876|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##BC033680|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##AK312432|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##NM_012137|DDAH1|23576|dimethylarginine dimethylaminohydrolase 1##EU446811|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK000767|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC110898|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK314566|ZNHIT6|54680|zinc finger, HIT-type containing 6##AL442074|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC026236|ZNHIT6|54680|zinc finger, HIT-type containing 6##AK298149|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_001170670|ZNHIT6|54680|zinc finger, HIT-type containing 6##NM_017953|ZNHIT6|54680|zinc finger, HIT-type containing 6##BC116180|COL24A1|255631|collagen, type XXIV, alpha 1##BC113654|COL24A1|255631|collagen, type XXIV, alpha 1##BC117170|COL24A1|255631|collagen, type XXIV, alpha 1##BC143715|COL24A1|255631|collagen, type XXIV, alpha 1##BC143717|COL24A1|255631|collagen, type XXIV, alpha 1##BC143718|COL24A1|255631|collagen, type XXIV, alpha 1##AY244357|COL24A1|255631|collagen, type XXIV, alpha 1##NM_152890|COL24A1|255631|collagen, type XXIV, alpha 1	0.0	
chr2	127842939	127843119	reg1039093.p1	3.644	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-429237	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-429322	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-3060165	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	21712	-	BC039307 NM_001001665	120313	-	AK131190 TSC_hg19_v1_chr2_-_127977781	134688	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.195277	
chr2	196269531	196269647	reg1041156.p2	3.644	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-3209960	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	-3210275	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-3557618	-	BC029413 NM_001127257 CR749813	251986	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	252319	+	AB463018 AF327442 AK094515 NM_018897 AB023161	663906	-	BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7	0.0	
chr3	122135138	122135233	reg1033752.p2	3.644	+	BC025762 NM_019069 TSC_hg19_v1_chr3_-_122134925	-268	-	NM_014367 AK026030 BC010896 BC015060 AF201944 AF107495 AF250321 TSC_hg19_v1_chr3_+_122103076 AK293994 AF191020	-32117	+	BC019231 BC109378 TSC_hg19_v1_chr3_-_122102079 BC054051 BC062725 NM_001017928	-33108	-	S75295 TSC_hg19_v1_chr3_-_122233757 BC090864	98515	-	TSC_hg19_v1_chr3_-_122233764 BC002374 BC003009 AK312713	98587	-	TSC_hg19_v1_chr3_-_122233782 NM_002264	98601	-	BC025762|WDR5B|54554|WD repeat domain 5B##NM_019069|WDR5B|54554|WD repeat domain 5B##NM_014367|FAM162A|26355|family with sequence similarity 162, member A##AK026030|FAM162A|26355|family with sequence similarity 162, member A##BC010896|FAM162A|26355|family with sequence similarity 162, member A##BC015060|FAM162A|26355|family with sequence similarity 162, member A##AF201944|FAM162A|26355|family with sequence similarity 162, member A##AF107495|FAM162A|26355|family with sequence similarity 162, member A##AF250321|FAM162A|26355|family with sequence similarity 162, member A##AK293994|FAM162A|26355|family with sequence similarity 162, member A##AF191020|FAM162A|26355|family with sequence similarity 162, member A##BC109378|CCDC58|131076|coiled-coil domain containing 58##BC054051|CCDC58|131076|coiled-coil domain containing 58##BC062725|CCDC58|131076|coiled-coil domain containing 58##NM_001017928|CCDC58|131076|coiled-coil domain containing 58##S75295|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC090864|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC002374|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##BC003009|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##AK312713|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)##NM_002264|KPNA1|3836|karyopherin alpha 1 (importin alpha 5)	0.0	
chr3	16100048	16100125	reg1035292.p1	3.644	+	AB002377 NM_015199 TSC_hg19_v1_chr3_-_15901096	-199074	-	TSC_hg19_v1_chr3_-_15839678 AK293770 NM_001195098	-260404	-	AY367056 NM_001195099 BC035170 BC048975	-302009	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	116108	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	206303	-	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	206622	+	AB002377|ANKRD28|23243|ankyrin repeat domain 28##NM_015199|ANKRD28|23243|ankyrin repeat domain 28##AK293770|ANKRD28|23243|ankyrin repeat domain 28##NM_001195098|ANKRD28|23243|ankyrin repeat domain 28##AY367056|ANKRD28|23243|ankyrin repeat domain 28##NM_001195099|ANKRD28|23243|ankyrin repeat domain 28##BC035170|ANKRD28|23243|ankyrin repeat domain 28##BC048975|ANKRD28|23243|ankyrin repeat domain 28##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1	0.0	
chr3	48693639	48693748	reg1038429.p1	3.644	+	AK056237 NM_022911 NM_134263 NM_134426 TSC_hg19_v1_chr3_-_48672944	-20746	-	TSC_hg19_v1_chr3_-_48672883 DQ891721 EU176609 EU832127 AF288410 AF416721 AK297695 BC017697 AB033288	-20846	-	AF279265 NM_001040454	-22415	-	TSC_hg19_v1_chr3_-_48700322 AF231023 NM_001407	6642	-	AB384897 CU677561 BC016052 BC006255 TSC_hg19_v1_chr3_-_48723349 AF303581 BC026280 AF178432 AJ242655 AY453794 NM_016453 NM_184231	29602	-	TSC_hg19_v1_chr3_-_48754622 BC019694 AK291501 AY007091 BC001864 BC065533 BC004469 AK304714 AK315204 AK024045 AK290526 AL137514 BX537544 NM_001005909 NM_001005910 NM_001005911 NM_001146178 NM_001146179 NM_001190316 NM_001190317 NM_016291	60956	-	AK056237|SLC26A6|65010|solute carrier family 26, member 6##NM_022911|SLC26A6|65010|solute carrier family 26, member 6##NM_134263|SLC26A6|65010|solute carrier family 26, member 6##NM_134426|SLC26A6|65010|solute carrier family 26, member 6##DQ891721|SLC26A6|65010|solute carrier family 26, member 6##EU176609|SLC26A6|65010|solute carrier family 26, member 6##EU832127|SLC26A6|65010|solute carrier family 26, member 6##AF288410|SLC26A6|65010|solute carrier family 26, member 6##AF416721|SLC26A6|65010|solute carrier family 26, member 6##AK297695|SLC26A6|65010|solute carrier family 26, member 6##BC017697|SLC26A6|65010|solute carrier family 26, member 6##AB033288|SLC26A6|65010|solute carrier family 26, member 6##AF279265|SLC26A6|65010|solute carrier family 26, member 6##NM_001040454|SLC26A6|65010|solute carrier family 26, member 6##AF231023|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)##NM_001407|CELSR3|1951|cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog, Drosophila)##BC016052|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC006255|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF303581|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC026280|NCKIPSD|51517|NCK interacting protein with SH3 domain##AF178432|NCKIPSD|51517|NCK interacting protein with SH3 domain##AJ242655|NCKIPSD|51517|NCK interacting protein with SH3 domain##AY453794|NCKIPSD|51517|NCK interacting protein with SH3 domain##NM_016453|NCKIPSD|51517|NCK interacting protein with SH3 domain##NM_184231|NCKIPSD|51517|NCK interacting protein with SH3 domain##BC019694|IP6K2|51447|inositol hexakisphosphate kinase 2##AK291501|IP6K2|51447|inositol hexakisphosphate kinase 2##AY007091|IP6K2|51447|inositol hexakisphosphate kinase 2##BC001864|IP6K2|51447|inositol hexakisphosphate kinase 2##BC065533|IP6K2|51447|inositol hexakisphosphate kinase 2##BC004469|IP6K2|51447|inositol hexakisphosphate kinase 2##AK304714|IP6K2|51447|inositol hexakisphosphate kinase 2##AK315204|IP6K2|51447|inositol hexakisphosphate kinase 2##AK024045|IP6K2|51447|inositol hexakisphosphate kinase 2##AK290526|IP6K2|51447|inositol hexakisphosphate kinase 2##AL137514|IP6K2|51447|inositol hexakisphosphate kinase 2##BX537544|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005909|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005910|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001005911|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001146178|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001146179|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001190316|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_001190317|IP6K2|51447|inositol hexakisphosphate kinase 2##NM_016291|IP6K2|51447|inositol hexakisphosphate kinase 2	0.034114	
chr4	36324664	36324800	reg1032091.p1	3.644	+	BC157885 NM_001170700	-39089	+	AK131492 NM_001136536 AK304357 AK316523	-41486	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	-78695	-	NM_001144990	921957	+	NM_001104629 BC037906	1130843	+	AK001879 NM_018302 AK225192	1261137	+	BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_001144990|KIAA1239|57495|KIAA1239##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19	0.0	
chr7	2272564	2272736	reg1030640.p1	3.644	+	TSC_hg19_v1_chr7_-_2272581 AK090959 AK310831 AK314227 AX746704 NM_001013836 NM_001013837 NM_003550	-70	-	TSC_hg19_v1_chr7_-_2272559 AF083811	-90	-	AK310481 TSC_hg19_v1_chr7_-_2272542	-115	-	TSC_hg19_v1_chr7_-_2281812 BC114514 BC114564	9157	-	TSC_hg19_v1_chr7_-_2281824 BC017181 AF093415 NM_013393 AK302060	9183	-	AB025233 NM_002452 NM_198948 NM_198949 BC051375 AB025234 AB025235 AB025240 BC014618 AK026631 AB025236 AB025237 AB025241 NM_198950 NM_198952	9225	+	AK090959|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310831|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK314227|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013836|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013837|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_003550|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AF083811|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##BC114514|FTSJ2|29960|FtsJ homolog 2 (E. coli)##BC114564|FTSJ2|29960|FtsJ homolog 2 (E. coli)##BC017181|FTSJ2|29960|FtsJ homolog 2 (E. coli)##AF093415|FTSJ2|29960|FtsJ homolog 2 (E. coli)##NM_013393|FTSJ2|29960|FtsJ homolog 2 (E. coli)##AK302060|FTSJ2|29960|FtsJ homolog 2 (E. coli)##AB025233|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_002452|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198948|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198949|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC051375|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025234|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025235|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025240|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##BC014618|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AK026631|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025236|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025237|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##AB025241|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198950|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1##NM_198952|NUDT1|4521|nudix (nucleoside diphosphate linked moiety X)-type motif 1	0.0	
chr10	125118855	125118922	reg1025962.p1	3.643	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-204532	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-204942	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-204990	+	AJ505757 NM_153442 BC112011 BC113462	306989	+	BC137492 BC146862 AY358565 NM_198148	532608	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	733011	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.0	
chr10	7562864	7562978	reg1026179.p2	3.643	+	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	-109487	-	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	-111671	-	TSC_hg19_v1_chr10_+_6622460 AY007155	-940441	+	AK027849 TSC_hg19_v1_chr10_-_7659249	96296	-	BC004282 NM_032817	98703	-	AK027831 AB075833 TSC_hg19_v1_chr10_-_7682819	119859	-	BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##AY007155|LOC439949|439949|uncharacterized LOC439949##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC004282|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_032817|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK027831|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AB075833|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.0	
chr1	243005527	243005632	reg1039690.p1	3.643	+	AK098092 NM_152666	-317582	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	-392809	-	BC132986 BC132988 AF276659 BC127722 NM_001004343	-843205	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	412777	-	TSC_hg19_v1_chr1_-_243418566 AK310003 BC050722	412993	-	TSC_hg19_v1_chr1_-_243418675 NM_001042404 NM_001042405 NM_014812	413112	-	AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa##AK310003|CEP170|9859|centrosomal protein 170kDa##BC050722|CEP170|9859|centrosomal protein 170kDa##NM_001042404|CEP170|9859|centrosomal protein 170kDa##NM_001042405|CEP170|9859|centrosomal protein 170kDa##NM_014812|CEP170|9859|centrosomal protein 170kDa	0.018187	
chr14	65672223	65672371	reg1030664.p2	3.643	+	TSC_hg19_v1_chr14_-_65569238 BC013669 NM_002382 NM_145112 NM_145113 NM_145114 NM_145116 NM_197957 AK290929 AL833643	-103059	-	AB463901 AY353088 CR542191 CU693010 X60287 M64240 AK292630 AK292189 BC003525 BC004516 AK290130 TSC_hg19_v1_chr14_-_65569205 BC036092 BC027924 BC025685	-103165	-	BC035148 BC052775 TSC_hg19_v1_chr14_+_65453967	-218331	+	AJ536056 NM_004480 NM_178155 NM_178156	205012	+	TSC_hg19_v1_chr14_+_65878582 BC142958 AK292413 AK294242 Y17976 Y17977	206323	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	207029	-	BC013669|MAX|4149|MYC associated factor X##NM_002382|MAX|4149|MYC associated factor X##NM_145112|MAX|4149|MYC associated factor X##NM_145113|MAX|4149|MYC associated factor X##NM_145114|MAX|4149|MYC associated factor X##NM_145116|MAX|4149|MYC associated factor X##NM_197957|MAX|4149|MYC associated factor X##AK290929|MAX|4149|MYC associated factor X##AL833643|MAX|4149|MYC associated factor X##AY353088|MAX|4149|MYC associated factor X##CR542191|MAX|4149|MYC associated factor X##X60287|MAX|4149|MYC associated factor X##M64240|MAX|4149|MYC associated factor X##AK292630|MAX|4149|MYC associated factor X##AK292189|MAX|4149|MYC associated factor X##BC003525|MAX|4149|MYC associated factor X##BC004516|MAX|4149|MYC associated factor X##AK290130|MAX|4149|MYC associated factor X##BC036092|MAX|4149|MYC associated factor X##BC027924|MAX|4149|MYC associated factor X##BC025685|MAX|4149|MYC associated factor X##AJ536056|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_004480|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178155|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178156|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431	0.0	
chr14	69282953	69283056	reg1002560.p2	3.643	+	NM_001244701 AB528867	-20020	-	NM_001244698 NM_004926	-22374	-	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	-23284	-	TSC_hg19_v1_chr14_-_69354901 BX641076	71935	-	BX248020 AK299362 TSC_hg19_v1_chr14_-_69444987	161982	-	BT007207 AB590251 DQ890778 DQ895768 EU716325 FJ410030 TSC_hg19_v1_chr14_-_69445830 M95178 BC015766	162826	-	NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BX641076|ACTN1|87|actinin, alpha 1##BX248020|ACTN1|87|actinin, alpha 1##AK299362|ACTN1|87|actinin, alpha 1##BT007207|ACTN1|87|actinin, alpha 1##DQ890778|ACTN1|87|actinin, alpha 1##DQ895768|ACTN1|87|actinin, alpha 1##EU716325|ACTN1|87|actinin, alpha 1##FJ410030|ACTN1|87|actinin, alpha 1##M95178|ACTN1|87|actinin, alpha 1##BC015766|ACTN1|87|actinin, alpha 1	0.0	
chr14	69283242	69283373	reg1002560.p3	3.643	+	NM_001244701 AB528867	-20323	-	NM_001244698 NM_004926	-22677	-	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	-23587	-	TSC_hg19_v1_chr14_-_69354901 BX641076	71632	-	BX248020 AK299362 TSC_hg19_v1_chr14_-_69444987	161679	-	BT007207 AB590251 DQ890778 DQ895768 EU716325 FJ410030 TSC_hg19_v1_chr14_-_69445830 M95178 BC015766	162523	-	NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BX641076|ACTN1|87|actinin, alpha 1##BX248020|ACTN1|87|actinin, alpha 1##AK299362|ACTN1|87|actinin, alpha 1##BT007207|ACTN1|87|actinin, alpha 1##DQ890778|ACTN1|87|actinin, alpha 1##DQ895768|ACTN1|87|actinin, alpha 1##EU716325|ACTN1|87|actinin, alpha 1##FJ410030|ACTN1|87|actinin, alpha 1##M95178|ACTN1|87|actinin, alpha 1##BC015766|ACTN1|87|actinin, alpha 1	0.0	
chr15	77280798	77280926	reg1032764.p1	3.643	+	TSC_hg19_v1_chr15_+_77224095 NM_002902 AK313833 X78669 BC004892 BT009790 CU678788	-56790	+	AB040887 TSC_hg19_v1_chr15_-_77197781 AK056095	-83091	-	TSC_hg19_v1_chr15_-_77197682 BC070197 BC107415 AK056515	-83198	-	TSC_hg19_v1_chr15_+_77287465 AK309856 NM_003978 AK310126 BC008602	6628	+	AK304052 U94778 AK316220 TSC_hg19_v1_chr15_+_77287720 AK298733	6844	+	TSC_hg19_v1_chr15_+_77287743 AK310072 AB451310 AB451440 AF038602 AF038603 DQ891779 DQ894963 AB528365	6965	+	NM_002902|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##AK313833|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##X78669|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##BC004892|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##BT009790|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##AB040887|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056095|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC070197|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC107415|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056515|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310072|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451310|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451440|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038603|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ891779|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ894963|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	0.0	
chr17	1510714	1510887	reg1031023.p1	3.643	+	BC082976 TSC_hg19_v1_chr17_-_1466077 BC027177 D30036 M73704 BC045108 BC068538 NM_006224	-44718	-	TSC_hg19_v1_chr17_-_1420177 AK312844 NM_001135642 NM_016532 NM_130766	-90621	-	TSC_hg19_v1_chr17_-_1419907 DQ892815 DQ896061 AB529166 AK297955 AK303907 AK307293 AB036829 AB036830 AK312585 BC004362	-90834	-	AF289592 TSC_hg19_v1_chr17_-_1531711 AB120364	20840	-	TSC_hg19_v1_chr17_-_1532115 BC027923 NM_152346 BC071859	21344	-	D63483 AK310174 AB052950 AB052949 AB052947 D86864 TSC_hg19_v1_chr17_-_1549050 AK291810 AB052948 BC039735 NM_003693 NM_145350 NM_145352 AK298737	38237	-	BC082976|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC027177|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D30036|PITPNA|5306|phosphatidylinositol transfer protein, alpha##M73704|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC045108|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC068538|PITPNA|5306|phosphatidylinositol transfer protein, alpha##NM_006224|PITPNA|5306|phosphatidylinositol transfer protein, alpha##AK312844|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_001135642|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_016532|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_130766|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ892815|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ896061|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK297955|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK303907|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK307293|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036829|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036830|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312585|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC004362|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AF289592|SLC43A2|124935|solute carrier family 43, member 2##AB120364|SLC43A2|124935|solute carrier family 43, member 2##BC027923|SLC43A2|124935|solute carrier family 43, member 2##NM_152346|SLC43A2|124935|solute carrier family 43, member 2##BC071859|SLC43A2|124935|solute carrier family 43, member 2##D63483|SCARF1|8578|scavenger receptor class F, member 1##AK310174|SCARF1|8578|scavenger receptor class F, member 1##AB052950|SCARF1|8578|scavenger receptor class F, member 1##AB052949|SCARF1|8578|scavenger receptor class F, member 1##AB052947|SCARF1|8578|scavenger receptor class F, member 1##D86864|SCARF1|8578|scavenger receptor class F, member 1##AK291810|SCARF1|8578|scavenger receptor class F, member 1##AB052948|SCARF1|8578|scavenger receptor class F, member 1##BC039735|SCARF1|8578|scavenger receptor class F, member 1##NM_003693|SCARF1|8578|scavenger receptor class F, member 1##NM_145350|SCARF1|8578|scavenger receptor class F, member 1##NM_145352|SCARF1|8578|scavenger receptor class F, member 1##AK298737|SCARF1|8578|scavenger receptor class F, member 1	0.0	
chr19	6531029	6531160	reg1034767.p2	3.643	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	-68	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-28777	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-49311	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	59938	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	60012	-	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	60064	-	NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule	0.0	
chr19	6543843	6543955	reg1027966.p1	3.643	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	-12873	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-41582	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-62116	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	47133	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	47207	-	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	47259	-	NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule	0.044495	
chr22	23112806	23112899	reg1032475.p1	3.643	+	TSC_hg19_v1_chr22_+_23063107 M18645 X53070 BC073786 X57805 X57813 AF026926 L35916 L35917 L35918 L35920 U43769 X64165 X64166 X54442	-49721	+	TSC_hg19_v1_chr22_+_23054863 BC054883 BC070352 BC070353 M97924 BC028090 BC073787 BC073794 X64132 BC007782 X57812 X57821 AY172962 AY190829 X52112	-57970	+	TSC_hg19_v1_chr22_+_23040397 AK129585 BC015833 M87790 BC064491 DQ896079 AF026923 AF026924 AF490949 L03626 AF490945 AF490951 HM996488 HM995992 AY686896 FJ385438 AY530325 AB063990 AB064017 AB064030 AF194613 AF194614 AF194615 AF194616 AF194617 AF194618 AF194619 AF194620 AF194621 AF194622 AF194623 AF194624 AF194625 AF194626 AF194627 AF194628 AF194629 AF194630 AF194631 AF194632 AF194633 AF194634 AF194635 AF194636 AF194637 AF194638 AF194639 AF194640 AF194641 AJ308461 AY942000 AY942037 AY942071 DQ098707 DQ098770 DQ098796 DQ098798 DQ322734 EF589529 EU599339 EU599357 EU599358 FJ385462 U76684 X91805 X99990 AY062362 AY955080 L38436 AJ132425 U09900 Y15770 AF044487 AF029338 AJ132856 AJ233735 AF103601 AF052820 AY062360 AF052819 AF052821 AF052822 AF052825 AF052826 S73510 FJ385555 AF103669 AF103612 AF103629 AF103639 AF103646 AF103689 U86669 AF103720	-72334	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	22254	+	TSC_hg19_v1_chr22_+_23154240 L29158 L29159 L29160 L29161 L29164 BC032452 BC089414 AY190827 X57810 L26902	41423	+	X62125 TSC_hg19_v1_chr22_+_23165276 AK129603 BC071804 BC033102 CU689610 L03633 HM996064 HM996172 AF124174 AF194540 AF194541 AF194542 AF194543 AF194544 AF194545 AF194546 AF194547 AF194548 AF194549 AF194550 AF194551 AF194552 AF194553 AF194554 AF194555 AF194556 AF194557 AF194558 AF194559 AF194560 AF194561 AF194562 AF194563 AF194564 AF194565 AF194566 AF194567 AF194568 AF194569 AF194570 AF194571 AF194572 AF194573 AF194574 AF194575 AF194576 AF194577 AJ388658 AJ697911 AM181371 AM183998 AM184000 AM184018 AY685383 AY942038 DQ098709 DQ098711 DQ098766 DQ098772 DQ098775 DQ098778 DQ098782 DQ322816 DQ322984 DQ322992 EF589387 EF589498 EF589544 GU086862 L26532 Y09387 AM184068 DQ098712 DQ098779 AJ399866 AY050712 DQ322899 DQ322900 DQ322979 L21956 S67988 AY950800 U09888 U09892 Y08149 AF103683 AF044486 AY962389 AF092503 AJ408283 DQ098753 Z46858 DQ098738 DQ098739 DQ098762 L38428 DQ098710 AF103704 AF103701 AF103718 AF490954 AF490947 AF103709 AF103640 AF103644 AF103645 AF103647 AF103697 AF103698 AF103700 U87151	52543	+	L35918|IGLJ3|28831|immunoglobulin lambda joining 3##BC070352|IGLV3-21|28796|immunoglobulin lambda variable 3-21##BC007782|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##X57812|IGLJ3|28831|immunoglobulin lambda joining 3##X57821|IGLJ3|28831|immunoglobulin lambda joining 3##DQ896079|IGL@|3535|immunoglobulin lambda locus	0.998422	CTCF.p2:7:0.998
chr4	38763270	38763354	reg1022624.p2	3.643	+	AF289565 TSC_hg19_v1_chr4_-_38666549	-96823	-	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	-97486	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-784295	+	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	21287	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	43107	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	95116	-	AF289565|FLJ13197|79667|uncharacterized FLJ13197##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6	0.0	
chr8	65607697	65607877	reg1021979.p1	3.643	+	TSC_hg19_v1_chr8_+_65493611 AK091333	-114123	+	NM_152414 AK293979	-114929	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-1526587	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	103492	-	TSC_hg19_v1_chr8_-_66546394 AK001373	938608	-	TSC_hg19_v1_chr8_-_66546404 AK304463	938619	-	AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AK001373|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1	0.0	
chr8	65658177	65658283	reg1037364.p1	3.643	+	TSC_hg19_v1_chr8_+_65493611 AK091333	-164566	+	NM_152414 AK293979	-165372	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-1577030	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	53049	-	TSC_hg19_v1_chr8_-_66546394 AK001373	888165	-	TSC_hg19_v1_chr8_-_66546404 AK304463	888176	-	AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AK001373|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1	0.05351	
chr1	100958208	100958346	reg1034055.p2	3.642	+	BC071578 TSC_hg19_v1_chr1_+_100818053 AF064103 AK310657 AF000367	-140174	+	TSC_hg19_v1_chr1_+_100818040 AF064102	-140237	+	TSC_hg19_v1_chr1_+_100818021 NM_003672 NM_033312 NM_033313	-140260	+	AB042410 BC036775 NM_022049	45432	+	AK225748 TSC_hg19_v1_chr1_+_101004594	46251	+	NM_001078 NM_001199834 NM_080682 TSC_hg19_v1_chr1_+_101185297 AK223266 AK291732 AK296692 BC068490 M30257 BC017276 BC085003 M60335 AB590609 EU831989 EU832082 X53051 CU686647	227029	+	BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF064102|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_003672|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_033312|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_033313|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AB042410|GPR88|54112|G protein-coupled receptor 88##BC036775|GPR88|54112|G protein-coupled receptor 88##NM_022049|GPR88|54112|G protein-coupled receptor 88##AK225748|GPR88|54112|G protein-coupled receptor 88##NM_001078|VCAM1|7412|vascular cell adhesion molecule 1##NM_001199834|VCAM1|7412|vascular cell adhesion molecule 1##NM_080682|VCAM1|7412|vascular cell adhesion molecule 1##AK223266|VCAM1|7412|vascular cell adhesion molecule 1##AK291732|VCAM1|7412|vascular cell adhesion molecule 1##AK296692|VCAM1|7412|vascular cell adhesion molecule 1##BC068490|VCAM1|7412|vascular cell adhesion molecule 1##M30257|VCAM1|7412|vascular cell adhesion molecule 1##BC017276|VCAM1|7412|vascular cell adhesion molecule 1##BC085003|VCAM1|7412|vascular cell adhesion molecule 1##M60335|VCAM1|7412|vascular cell adhesion molecule 1##EU831989|VCAM1|7412|vascular cell adhesion molecule 1##EU832082|VCAM1|7412|vascular cell adhesion molecule 1##X53051|VCAM1|7412|vascular cell adhesion molecule 1	0.0	
chr1	165098926	165099036	reg1042635.p1	3.642	+	TSC_hg19_v1_chr1_+_164818083 AK022520	-280858	+	AK291415 M86546 TSC_hg19_v1_chr1_+_164528957 AK299673 BC101578 BC143435 BC143451 AB384885 BT006705	-569995	+	TSC_hg19_v1_chr1_+_164528595 NM_001204961 NM_001204963 NM_002585	-570390	+	AK122800 NM_001174069	226494	-	AK127724 NM_177398	226970	-	AB593016 AK312922 NM_006917	315564	-	AK022520|PBX1|5087|pre-B-cell leukemia homeobox 1##AK291415|PBX1|5087|pre-B-cell leukemia homeobox 1##M86546|PBX1|5087|pre-B-cell leukemia homeobox 1##AK299673|PBX1|5087|pre-B-cell leukemia homeobox 1##BC101578|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143435|PBX1|5087|pre-B-cell leukemia homeobox 1##BC143451|PBX1|5087|pre-B-cell leukemia homeobox 1##BT006705|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204961|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_001204963|PBX1|5087|pre-B-cell leukemia homeobox 1##NM_002585|PBX1|5087|pre-B-cell leukemia homeobox 1##AK122800|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_001174069|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AK127724|LMX1A|4009|LIM homeobox transcription factor 1, alpha##NM_177398|LMX1A|4009|LIM homeobox transcription factor 1, alpha##AB593016|RXRG|6258|retinoid X receptor, gamma##AK312922|RXRG|6258|retinoid X receptor, gamma##NM_006917|RXRG|6258|retinoid X receptor, gamma	0.328062	CTCF.p2:-9:0.328
chr11	65680550	65680623	reg1036985.p2	3.642	+	TSC_hg19_v1_chr11_-_65667860 AK299050 AK313718 NM_005438	-12638	-	AK293297 TSC_hg19_v1_chr11_-_65667859	-12728	-	CR542257 CR542278 AB463654 DQ891054 DQ892703 DQ893332 DQ894233 DQ896648 EU176469 CU677659 TSC_hg19_v1_chr11_-_65667855 S68214 X16707 AK222902 BC016648	-12754	-	AF073483 TSC_hg19_v1_chr11_-_65686528 BC013185 NM_001135635 NM_031450	5912	-	NM_006442 TSC_hg19_v1_chr11_+_65686745	6153	+	TSC_hg19_v1_chr11_+_65686920 BC010025 AB463581 CU679579 EU446936 X96506	6373	+	AK299050|FOSL1|8061|FOS-like antigen 1##AK313718|FOSL1|8061|FOS-like antigen 1##NM_005438|FOSL1|8061|FOS-like antigen 1##AK293297|FOSL1|8061|FOS-like antigen 1##CR542257|FOSL1|8061|FOS-like antigen 1##CR542278|FOSL1|8061|FOS-like antigen 1##DQ891054|FOSL1|8061|FOS-like antigen 1##DQ892703|FOSL1|8061|FOS-like antigen 1##DQ893332|FOSL1|8061|FOS-like antigen 1##DQ894233|FOSL1|8061|FOS-like antigen 1##DQ896648|FOSL1|8061|FOS-like antigen 1##EU176469|FOSL1|8061|FOS-like antigen 1##X16707|FOSL1|8061|FOS-like antigen 1##AK222902|FOSL1|8061|FOS-like antigen 1##BC016648|FOSL1|8061|FOS-like antigen 1##AF073483|C11orf68|83638|chromosome 11 open reading frame 68##BC013185|C11orf68|83638|chromosome 11 open reading frame 68##NM_001135635|C11orf68|83638|chromosome 11 open reading frame 68##NM_031450|C11orf68|83638|chromosome 11 open reading frame 68##NM_006442|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##BC010025|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##EU446936|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##X96506|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)	0.0	
chr1	234504620	234504711	reg1036810.p2	3.642	+	TSC_hg19_v1_chr1_+_234350005 BC037878	-154659	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-464053	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-754746	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	4707	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	110195	-	TSC_hg19_v1_chr1_-_234743489 BC020516	238861	-	BC037878|SLC35F3|148641|solute carrier family 35, member F3##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2	0.204195	CTCF.p2:-41:0.204
chr12	93530653	93530783	reg1035591.p2	3.642	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-207620	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-207675	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	-207780	-	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	241174	+	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	304968	-	TSC_hg19_v1_chr12_-_93835718 D83004	305000	-	NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.0	
chr14	63112359	63112427	reg1045318.p2	3.642	+	TSC_hg19_v1_chr14_+_62584125 BX248751	-528235	+	AJ617628 NM_031914 BC117363 BC143598 HQ258344 AB102949	-649755	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	-883274	+	AF418206 AF472412 AF493798 NM_139318 NM_172375 BC073979	399536	-	AK074484 NM_172376	456190	-	NM_020663 AF087862 AK027351 AK027278 BC062575 AB209218 AF309563	558788	+	BX248751|FLJ43390|646113|uncharacterized LOC646113##AJ617628|SYT16|83851|synaptotagmin XVI##NM_031914|SYT16|83851|synaptotagmin XVI##BC117363|SYT16|83851|synaptotagmin XVI##BC143598|SYT16|83851|synaptotagmin XVI##HQ258344|SYT16|83851|synaptotagmin XVI##AB102949|SYT16|83851|synaptotagmin XVI##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##AF418206|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF472412|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AF493798|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_139318|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172375|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##BC073979|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##AK074484|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_172376|KCNH5|27133|potassium voltage-gated channel, subfamily H (eag-related), member 5##NM_020663|RHOJ|57381|ras homolog gene family, member J##AF087862|RHOJ|57381|ras homolog gene family, member J##AK027351|RHOJ|57381|ras homolog gene family, member J##AK027278|RHOJ|57381|ras homolog gene family, member J##BC062575|RHOJ|57381|ras homolog gene family, member J##AB209218|RHOJ|57381|ras homolog gene family, member J##AF309563|RHOJ|57381|ras homolog gene family, member J	0.0	
chr1	50737692	50737781	reg1012906.p1	3.642	+	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-162198	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-163052	+	TSC_hg19_v1_chr1_+_50574591 NM_001144774 NM_021952	-163145	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	151375	-	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	687841	-	TSC_hg19_v1_chr1_-_51425740 BC067100	688020	-	AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_001144774|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_021952|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##NM_032110|DMRTA2|63950|DMRT-like family A2##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.344851	
chr18	59279902	59279978	reg1036827.p1	3.642	+	AF217289 BC101047 BC101048 BC101049 NM_031891	-122166	+	AK314130 NM_005912	-1239940	-	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-1712711	+	AK096495 NM_173557	280363	-	AF109219 TSC_hg19_v1_chr18_-_59854208	574254	-	TSC_hg19_v1_chr18_-_59854227 BC028363	574281	-	AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152##AF109219|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N##BC028363|PIGN|23556|phosphatidylinositol glycan anchor biosynthesis, class N	0.0	
chr18	60952779	60952912	reg1036422.p1	3.642	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-156910	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-568537	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-568919	+	BC027258 NM_000633 NM_000657	33715	-	TSC_hg19_v1_chr18_-_60986977 X06487	34148	-	TSC_hg19_v1_chr18_-_60987309 M13994	34441	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr19	3065933	3066040	reg1040153.p1	3.642	+	TSC_hg19_v1_chr19_-_3062919 AB527754 HQ258149 BC113735 BC113737 NM_198969 AK094591	-2979	-	X73357 TSC_hg19_v1_chr19_-_3062347 U04241 AF072902 AK314713 NM_001130 NM_198970	-3704	-	X73358 TSC_hg19_v1_chr19_-_3061344	-4689	-	TSC_hg19_v1_chr19_+_3094359 BC089041 NM_002067	28372	+	TSC_hg19_v1_chr19_+_3094528 BC096225 BC096226 BC096227 AB463701 AF011497 AF493900 CR457004 AB209435	28605	+	TSC_hg19_v1_chr19_+_3122331 BC111027 BC001528	56407	+	HQ258149|AES|166|amino-terminal enhancer of split##BC113735|AES|166|amino-terminal enhancer of split##BC113737|AES|166|amino-terminal enhancer of split##NM_198969|AES|166|amino-terminal enhancer of split##AK094591|AES|166|amino-terminal enhancer of split##X73357|AES|166|amino-terminal enhancer of split##U04241|AES|166|amino-terminal enhancer of split##AF072902|AES|166|amino-terminal enhancer of split##AK314713|AES|166|amino-terminal enhancer of split##NM_001130|AES|166|amino-terminal enhancer of split##NM_198970|AES|166|amino-terminal enhancer of split##X73358|AES|166|amino-terminal enhancer of split##BC089041|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##NM_002067|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096225|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096226|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC096227|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF011497|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AF493900|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##CR457004|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##AB209435|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)##BC001528|GNA11|2767|guanine nucleotide binding protein (G protein), alpha 11 (Gq class)	0.0	
chr20	18731803	18731969	reg1042753.p2	3.642	+	TSC_hg19_v1_chr20_+_18568661 NM_080820 BC045167 AK074304 BC100923 BC100924 BC100925 BC100926 AK291440 AF332356 CU692252	-163236	+	BC092494 AK024594 BC015983 TSC_hg19_v1_chr20_+_18548094 BC039422 BC127753 BC127754 BC141963 BC141964 BC150559 BC150560 AF147354	-183786	+	TSC_hg19_v1_chr20_+_18488583 AK299171 BC001575 AK299513 NM_001172745 BC005404	-243260	+	AF418568 AF418570 AX721297 NM_178483 AK130970 AY248902 BC105121 BC112024	62512	+	NM_001242671	78952	-	TSC_hg19_v1_chr20_+_19193285 AF288087 NM_020689	461399	+	NM_080820|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC045167|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK074304|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100923|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100924|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100925|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC100926|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AK291440|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##AF332356|DTD1|92675|D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)##BC092494|LINC00493|388789|long intergenic non-protein coding RNA 493##AK024594|LINC00493|388789|long intergenic non-protein coding RNA 493##BC015983|LINC00493|388789|long intergenic non-protein coding RNA 493##BC039422|LINC00493|388789|long intergenic non-protein coding RNA 493##BC127753|LINC00493|388789|long intergenic non-protein coding RNA 493##BC127754|LINC00493|388789|long intergenic non-protein coding RNA 493##BC141963|LINC00493|388789|long intergenic non-protein coding RNA 493##BC141964|LINC00493|388789|long intergenic non-protein coding RNA 493##BC150559|LINC00493|388789|long intergenic non-protein coding RNA 493##BC150560|LINC00493|388789|long intergenic non-protein coding RNA 493##AF147354|LINC00493|388789|long intergenic non-protein coding RNA 493##AK299171|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC001575|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AK299513|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##NM_001172745|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##BC005404|SEC23B|10483|Sec23 homolog B (S. cerevisiae)##AF418568|C20orf79|140856|chromosome 20 open reading frame 79##AF418570|C20orf79|140856|chromosome 20 open reading frame 79##NM_178483|C20orf79|140856|chromosome 20 open reading frame 79##AK130970|C20orf79|140856|chromosome 20 open reading frame 79##AY248902|C20orf79|140856|chromosome 20 open reading frame 79##BC105121|C20orf79|140856|chromosome 20 open reading frame 79##BC112024|C20orf79|140856|chromosome 20 open reading frame 79##NM_001242671|LOC100128496|100128496|uncharacterized LOC100128496##AF288087|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3##NM_020689|SLC24A3|57419|solute carrier family 24 (sodium/potassium/calcium exchanger), member 3	0.0	
chr22	40221906	40222046	reg1030096.p2	3.642	+	AF129133 AF142567 AF211189 AF393329 NM_001003406 NM_021096	-255219	+	TSC_hg19_v1_chr22_-_39928773 CR456443 BC037573 NM_194326	-293162	-	BC047711 TSC_hg19_v1_chr22_-_39928752 AK025423	-293225	-	BC033895 NM_152512	67817	-	AY069959 NM_004810 TSC_hg19_v1_chr22_+_40297087 AK303332 AK303512 AF236119 AJ011736 BC025692 AF042380 AF102694	75148	+	TSC_hg19_v1_chr22_+_40297183 AF129476 AF090456 CR456498 Y18051	75271	+	AF129133|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF142567|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF211189|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##AF393329|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_001003406|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##NM_021096|CACNA1I|8911|calcium channel, voltage-dependent, T type, alpha 1I subunit##CR456443|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC037573|RPS19BP1|91582|ribosomal protein S19 binding protein 1##NM_194326|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC047711|RPS19BP1|91582|ribosomal protein S19 binding protein 1##AK025423|RPS19BP1|91582|ribosomal protein S19 binding protein 1##BC033895|ENTHD1|150350|ENTH domain containing 1##NM_152512|ENTHD1|150350|ENTH domain containing 1##AY069959|GRAP2|9402|GRB2-related adaptor protein 2##NM_004810|GRAP2|9402|GRB2-related adaptor protein 2##AK303332|GRAP2|9402|GRB2-related adaptor protein 2##AK303512|GRAP2|9402|GRB2-related adaptor protein 2##AF236119|GRAP2|9402|GRB2-related adaptor protein 2##AJ011736|GRAP2|9402|GRB2-related adaptor protein 2##BC025692|GRAP2|9402|GRB2-related adaptor protein 2##AF042380|GRAP2|9402|GRB2-related adaptor protein 2##AF102694|GRAP2|9402|GRB2-related adaptor protein 2##AF129476|GRAP2|9402|GRB2-related adaptor protein 2##AF090456|GRAP2|9402|GRB2-related adaptor protein 2##CR456498|GRAP2|9402|GRB2-related adaptor protein 2##Y18051|GRAP2|9402|GRB2-related adaptor protein 2	0.0	
chr3	172468275	172468374	reg1039332.p1	3.642	+	CU688560 TSC_hg19_v1_chr3_-_172428856 AB037784 AK294811 AK295641 BC047588 AK299422 AK304253 AK316431 BC028734 NM_001146276 NM_001146277 NM_001146278 NM_020792	-39434	-	AY312579 BT019564 CR456895 DQ848564 EU183231 AB590324 CU689506 DQ890873 DQ894029 BC009795 TSC_hg19_v1_chr3_-_172241221 BC032722 BC020220 AK309200 U37518 U57059 AK296085 AK312742 NM_001190943 NM_001190942 NM_003810	-227146	-	AY429112 BC069068 BC069374 U60179 U60181 AB587602 HQ258211 BC113547 NM_004122 NM_198407	-302101	-	TSC_hg19_v1_chr3_+_172468557 BC070038 AK314581 AY376439 AK308391	200	+	BC112086 AK023267 NM_018098 AB528037 DQ847274 TSC_hg19_v1_chr3_+_172472359	3978	+	BC034496 AF345909 AF404758 AK093041 AX747878 NM_031955	390684	-	AB037784|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK294811|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK295641|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC047588|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK299422|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK304253|NCEH1|57552|neutral cholesterol ester hydrolase 1##AK316431|NCEH1|57552|neutral cholesterol ester hydrolase 1##BC028734|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146276|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146277|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_001146278|NCEH1|57552|neutral cholesterol ester hydrolase 1##NM_020792|NCEH1|57552|neutral cholesterol ester hydrolase 1##AY312579|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BT019564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##CR456895|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ848564|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##EU183231|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ890873|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##DQ894029|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC009795|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC032722|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##BC020220|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U37518|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##U57059|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK296085|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AK312742|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190943|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_001190942|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##NM_003810|TNFSF10|8743|tumor necrosis factor (ligand) superfamily, member 10##AY429112|GHSR|2693|growth hormone secretagogue receptor##BC069068|GHSR|2693|growth hormone secretagogue receptor##BC069374|GHSR|2693|growth hormone secretagogue receptor##U60179|GHSR|2693|growth hormone secretagogue receptor##U60181|GHSR|2693|growth hormone secretagogue receptor##HQ258211|GHSR|2693|growth hormone secretagogue receptor##BC113547|GHSR|2693|growth hormone secretagogue receptor##NM_004122|GHSR|2693|growth hormone secretagogue receptor##NM_198407|GHSR|2693|growth hormone secretagogue receptor##BC070038|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK314581|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AY376439|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK308391|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC112086|ECT2|1894|epithelial cell transforming sequence 2 oncogene##AK023267|ECT2|1894|epithelial cell transforming sequence 2 oncogene##NM_018098|ECT2|1894|epithelial cell transforming sequence 2 oncogene##DQ847274|ECT2|1894|epithelial cell transforming sequence 2 oncogene##BC034496|SPATA16|83893|spermatogenesis associated 16##AF345909|SPATA16|83893|spermatogenesis associated 16##AF404758|SPATA16|83893|spermatogenesis associated 16##AK093041|SPATA16|83893|spermatogenesis associated 16##NM_031955|SPATA16|83893|spermatogenesis associated 16	0.9965	CTCF.p2:10:0.997
chr5	88023658	88023772	reg1038576.p1	3.642	+	TSC_hg19_v1_chr5_-_87980643 AK125167	-43008	-	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	-54570	-	BC047059 TSC_hg19_v1_chr5_+_87564842	-458866	+	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	95958	-	TSC_hg19_v1_chr5_-_88179002 AK312472 L08895 AK307883 BC026341	155291	-	TSC_hg19_v1_chr5_-_88179279 NM_001193350 NM_002397	155570	-	AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##BC047059|LOC100505894|100505894|uncharacterized LOC100505894##EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C##AK312472|MEF2C|4208|myocyte enhancer factor 2C##L08895|MEF2C|4208|myocyte enhancer factor 2C##AK307883|MEF2C|4208|myocyte enhancer factor 2C##BC026341|MEF2C|4208|myocyte enhancer factor 2C##NM_001193350|MEF2C|4208|myocyte enhancer factor 2C##NM_002397|MEF2C|4208|myocyte enhancer factor 2C	0.997223	CTCF.p2:5:0.997
chr6	126573486	126573600	reg1032455.p1	3.642	+	TSC_hg19_v1_chr6_+_126307685 AK308651	-265880	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	-265941	+	TSC_hg19_v1_chr6_+_126277915 NM_138571 BX647228 AK309857 BC015732 AK057688 AJ420577 AY035387 AY035388 AY486460 AY486461 DQ892201 DQ895396	-295558	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	87727	+	TSC_hg19_v1_chr6_+_127439818 BC022367	866268	+	NM_032784 AF251057	866508	+	AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_138571|HINT3|135114|histidine triad nucleotide binding protein 3##BX647228|HINT3|135114|histidine triad nucleotide binding protein 3##AK309857|HINT3|135114|histidine triad nucleotide binding protein 3##BC015732|HINT3|135114|histidine triad nucleotide binding protein 3##AK057688|HINT3|135114|histidine triad nucleotide binding protein 3##AJ420577|HINT3|135114|histidine triad nucleotide binding protein 3##AY035387|HINT3|135114|histidine triad nucleotide binding protein 3##AY035388|HINT3|135114|histidine triad nucleotide binding protein 3##AY486460|HINT3|135114|histidine triad nucleotide binding protein 3##AY486461|HINT3|135114|histidine triad nucleotide binding protein 3##DQ892201|HINT3|135114|histidine triad nucleotide binding protein 3##DQ895396|HINT3|135114|histidine triad nucleotide binding protein 3##BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##BC022367|RSPO3|84870|R-spondin 3##NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3	0.913252	CTCF.p2:-29:0.913
chr7	150148593	150148773	reg1035186.p2	3.642	+	TSC_hg19_v1_chr7_+_150148080 AL834361 BC107037	-577	+	TSC_hg19_v1_chr7_+_150147936 NM_175571	-735	+	TSC_hg19_v1_chr7_+_150147882 AK314426	-799	+	NM_153236 BC006010 BC027613	63270	+	NM_018326 TSC_hg19_v1_chr7_+_150264477 AK301441 BC020657 AK301606 BC020776 AF117333 AK001972	115793	+	BC074744 AK294989 BC069461 AK074044 AK308110 BC060760 AK026343 AJ580952 AK314667 AK300445 TSC_hg19_v1_chr7_-_150329475 CR749355	180697	-	AL834361|GIMAP8|155038|GTPase, IMAP family member 8##BC107037|GIMAP8|155038|GTPase, IMAP family member 8##NM_175571|GIMAP8|155038|GTPase, IMAP family member 8##AK314426|GIMAP8|155038|GTPase, IMAP family member 8##NM_153236|GIMAP7|168537|GTPase, IMAP family member 7##BC006010|GIMAP7|168537|GTPase, IMAP family member 7##BC027613|GIMAP7|168537|GTPase, IMAP family member 7##NM_018326|GIMAP4|55303|GTPase, IMAP family member 4##AK301441|GIMAP4|55303|GTPase, IMAP family member 4##BC020657|GIMAP4|55303|GTPase, IMAP family member 4##AK301606|GIMAP4|55303|GTPase, IMAP family member 4##BC020776|GIMAP4|55303|GTPase, IMAP family member 4##AF117333|GIMAP4|55303|GTPase, IMAP family member 4##AK001972|GIMAP4|55303|GTPase, IMAP family member 4##BC074744|GIMAP6|474344|GTPase, IMAP family member 6##AK294989|GIMAP6|474344|GTPase, IMAP family member 6##BC069461|GIMAP6|474344|GTPase, IMAP family member 6##AK074044|GIMAP6|474344|GTPase, IMAP family member 6##AK308110|GIMAP6|474344|GTPase, IMAP family member 6##BC060760|GIMAP6|474344|GTPase, IMAP family member 6##AK026343|GIMAP6|474344|GTPase, IMAP family member 6##AJ580952|GIMAP6|474344|GTPase, IMAP family member 6##AK314667|GIMAP6|474344|GTPase, IMAP family member 6##AK300445|GIMAP6|474344|GTPase, IMAP family member 6##CR749355|GIMAP6|474344|GTPase, IMAP family member 6	0.0	
chr8	42911192	42911369	reg1037008.p2	3.642	+	TSC_hg19_v1_chr8_+_42752142 BC056146	-159134	+	TSC_hg19_v1_chr8_+_42752090 AK309224	-159192	+	TSC_hg19_v1_chr8_+_42752068 BC048304 NM_032410	-159228	+	TSC_hg19_v1_chr8_+_42911465 NM_002027 BC037295 AK292121 L00634 BC084566 L10413 AB590505 BT009854 BC017029	188	+	TSC_hg19_v1_chr8_+_42948657 NM_032237	37373	+	AK027009 TSC_hg19_v1_chr8_+_42948660	37387	+	BC056146|HOOK3|84376|hook homolog 3 (Drosophila)##AK309224|HOOK3|84376|hook homolog 3 (Drosophila)##BC048304|HOOK3|84376|hook homolog 3 (Drosophila)##NM_032410|HOOK3|84376|hook homolog 3 (Drosophila)##NM_002027|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC037295|FNTA|2339|farnesyltransferase, CAAX box, alpha##AK292121|FNTA|2339|farnesyltransferase, CAAX box, alpha##L00634|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC084566|FNTA|2339|farnesyltransferase, CAAX box, alpha##L10413|FNTA|2339|farnesyltransferase, CAAX box, alpha##BT009854|FNTA|2339|farnesyltransferase, CAAX box, alpha##BC017029|FNTA|2339|farnesyltransferase, CAAX box, alpha##NM_032237|SGK196|84197|protein kinase-like protein SgK196	0.012926	
chrX	11647806	11647904	reg1035826.p1	3.642	+	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	-336313	+	AF177663 NM_013423 AK297713	-363747	-	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	-518386	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	35965	-	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	128488	+	NM_001193270 AK300814	128862	+	AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase##AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	0.115133	
chr1	200807233	200807364	reg1036403.p2	3.641	+	TSC_hg19_v1_chr1_+_200708732 AK095640 NM_203459	-98627	+	TSC_hg19_v1_chr1_-_200639091 BC041801 NM_001031725	-168190	-	AK299219 BC020201 TSC_hg19_v1_chr1_-_200639024 AL136611 BC014183 AK307569	-168269	-	BC126386 BC126388 AK315339 NM_005298	34825	+	TSC_hg19_v1_chr1_+_200860668 NM_018265 AK001583 AK001763 BC106877	53348	+	AK316510 NM_001142569 TSC_hg19_v1_chr1_+_200864027 AK303885	56699	+	AK095640|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##NM_203459|CAMSAP2|23271|calmodulin regulated spectrin-associated protein family, member 2##BC041801|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##NM_001031725|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK299219|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC020201|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AL136611|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC014183|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##AK307569|DDX59|83479|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59##BC126386|GPR25|2848|G protein-coupled receptor 25##BC126388|GPR25|2848|G protein-coupled receptor 25##AK315339|GPR25|2848|G protein-coupled receptor 25##NM_005298|GPR25|2848|G protein-coupled receptor 25##NM_018265|C1orf106|55765|chromosome 1 open reading frame 106##AK001583|C1orf106|55765|chromosome 1 open reading frame 106##AK001763|C1orf106|55765|chromosome 1 open reading frame 106##BC106877|C1orf106|55765|chromosome 1 open reading frame 106##AK316510|C1orf106|55765|chromosome 1 open reading frame 106##NM_001142569|C1orf106|55765|chromosome 1 open reading frame 106##AK303885|C1orf106|55765|chromosome 1 open reading frame 106	0.991775	CTCF.p2:-6:0.992
chr12	92890604	92890785	reg1033290.p2	3.641	+	AJ845168 NM_001025232	-68771	-	AJ845165 AJ845166 NM_001025233	-72960	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-351051	-	NM_001037671 NM_001178097	205924	+	NM_001004330 AK128530	239593	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	432244	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr14	24564683	24564756	reg1035342.p1	3.641	+	TSC_hg19_v1_chr14_+_24563519 NM_001018073 NM_004563 AK311710 AK316206 AK129934 AK307913 X92720 BC001454 BX248272 CU674712 CR456913	-1228	+	M95925 M81840 NM_006177 BC012395 AB593104 AB593106 AB593102	-10889	-	AK314182 BC018046 AB009288 NM_006032 TSC_hg19_v1_chr14_+_24540770 AK294460 AK222675 AL137688	-23950	+	NM_001163484 TSC_hg19_v1_chr14_+_24583976	19222	+	TSC_hg19_v1_chr14_+_24583985 NM_025230 AB209073	19273	+	TSC_hg19_v1_chr14_+_24584020 AK074296 AK307849 BC067132	19308	+	NM_001018073|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##NM_004563|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK311710|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK316206|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK129934|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##AK307913|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##X92720|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##BC001454|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##BX248272|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##CR456913|PCK2|5106|phosphoenolpyruvate carboxykinase 2 (mitochondrial)##M95925|NRL|4901|neural retina leucine zipper##M81840|NRL|4901|neural retina leucine zipper##NM_006177|NRL|4901|neural retina leucine zipper##BC012395|NRL|4901|neural retina leucine zipper##AB593104|NRL|4901|neural retina leucine zipper##AB593106|NRL|4901|neural retina leucine zipper##AB593102|NRL|4901|neural retina leucine zipper##AK314182|CPNE6|9362|copine VI (neuronal)##BC018046|CPNE6|9362|copine VI (neuronal)##AB009288|CPNE6|9362|copine VI (neuronal)##NM_006032|CPNE6|9362|copine VI (neuronal)##AK294460|CPNE6|9362|copine VI (neuronal)##AK222675|CPNE6|9362|copine VI (neuronal)##AL137688|CPNE6|9362|copine VI (neuronal)##NM_001163484|DCAF11|80344|DDB1 and CUL4 associated factor 11##NM_025230|DCAF11|80344|DDB1 and CUL4 associated factor 11##AB209073|DCAF11|80344|DDB1 and CUL4 associated factor 11##AK074296|DCAF11|80344|DDB1 and CUL4 associated factor 11##AK307849|DCAF11|80344|DDB1 and CUL4 associated factor 11##BC067132|DCAF11|80344|DDB1 and CUL4 associated factor 11	0.0	
chr17	38573552	38573658	reg1038232.p2	3.641	+	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	-52659	-	NM_001024809	-75335	+	TSC_hg19_v1_chr17_+_38474548 AK130192	-99058	+	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	519	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	26214	+	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	84241	-	AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_001024809|RARA|5914|retinoic acid receptor, alpha##AK130192|RARA|5914|retinoic acid receptor, alpha##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4	0.0	
chr19	42340189	42340285	reg1031572.p2	3.641	+	AK298694 NM_001815 D90277 D90278 L00692 L00693 BC106728	-39685	+	NM_002483 TSC_hg19_v1_chr19_+_42259437 AK312542 M29541 M18728 M18216 BC005008 BT009774	-80766	+	M16234 TSC_hg19_v1_chr19_+_42221424	-118819	+	AY358726 NM_173506	8270	-	AK057404 AK301822 NM_001040283 BC039266 BC029202	8834	+	BC018616 NM_001022	23750	+	NM_001815|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90277|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##D90278|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00692|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##L00693|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##BC106728|CEACAM3|1084|carcinoembryonic antigen-related cell adhesion molecule 3##NM_002483|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##AK312542|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M29541|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18728|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M18216|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BC005008|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##BT009774|CEACAM6|4680|carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen)##M16234|CEACAM5|1048|carcinoembryonic antigen-related cell adhesion molecule 5##AY358726|LYPD4|147719|LY6/PLAUR domain containing 4##NM_173506|LYPD4|147719|LY6/PLAUR domain containing 4##AK057404|DMRTC2|63946|DMRT-like family C2##AK301822|DMRTC2|63946|DMRT-like family C2##NM_001040283|DMRTC2|63946|DMRT-like family C2##BC039266|DMRTC2|63946|DMRT-like family C2##BC029202|DMRTC2|63946|DMRT-like family C2##BC018616|RPS19|6223|ribosomal protein S19##NM_001022|RPS19|6223|ribosomal protein S19	0.963838	CTCF.p2:-11:0.964
chr21	43889351	43889497	reg1029982.p1	3.641	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-65412	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-73263	-	M12075 BC032811 NM_003225 X00474 X52003	-102802	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	26956	-	AJ269529 NM_018964	30317	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	44579	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.03346	
chr3	161908757	161908849	reg1035871.p2	3.641	+	NM_001080440	-694208	+	AF458592 BC037817 NM_001040100	-818995	-	AK308865 BC013317 NM_015938 TSC_hg19_v1_chr3_+_160939098 AF132941 AK296710	-969682	+	BC132834 BC132860 BC115033 BC115034 BC116452 BC116453 X63597 NM_001041	2887475	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	3005702	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	3646390	-	NM_001080440|OTOL1|131149|otolin 1##AF458592|SPTSSB|165679|serine palmitoyltransferase, small subunit B##BC037817|SPTSSB|165679|serine palmitoyltransferase, small subunit B##NM_001040100|SPTSSB|165679|serine palmitoyltransferase, small subunit B##AK308865|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC013317|NMD3|51068|NMD3 homolog (S. cerevisiae)##NM_015938|NMD3|51068|NMD3 homolog (S. cerevisiae)##AF132941|NMD3|51068|NMD3 homolog (S. cerevisiae)##AK296710|NMD3|51068|NMD3 homolog (S. cerevisiae)##BC132834|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC132860|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115033|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC115034|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116452|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC116453|SI|6476|sucrase-isomaltase (alpha-glucosidase)##X63597|SI|6476|sucrase-isomaltase (alpha-glucosidase)##NM_001041|SI|6476|sucrase-isomaltase (alpha-glucosidase)##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase	0.899747	CTCF.p2:-8:0.900
chr3	2569066	2569246	reg1034745.p1	3.641	+	AK095729 TSC_hg19_v1_chr3_+_2553286	-15876	+	NM_001206955	-288644	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	-428595	+	NM_001206956 NM_175613 AK057278 AK314396 BC026119	364753	+	AK304256 NM_000564 NM_001243099 NM_175724 NM_175725 NM_175726 NM_175727 NM_175728	582901	-	NM_182916 TSC_hg19_v1_chr3_+_3168634 AK290411 BC005184 AL834397 BC012537 AB063105 AF151805 AK124137	599495	+	AK095729|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##NM_001206956|CNTN4|152330|contactin 4##NM_175613|CNTN4|152330|contactin 4##AK057278|CNTN4|152330|contactin 4##AK314396|CNTN4|152330|contactin 4##BC026119|CNTN4|152330|contactin 4##AK304256|IL5RA|3568|interleukin 5 receptor, alpha##NM_000564|IL5RA|3568|interleukin 5 receptor, alpha##NM_001243099|IL5RA|3568|interleukin 5 receptor, alpha##NM_175724|IL5RA|3568|interleukin 5 receptor, alpha##NM_175725|IL5RA|3568|interleukin 5 receptor, alpha##NM_175726|IL5RA|3568|interleukin 5 receptor, alpha##NM_175727|IL5RA|3568|interleukin 5 receptor, alpha##NM_175728|IL5RA|3568|interleukin 5 receptor, alpha##NM_182916|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AK290411|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC005184|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AL834397|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##BC012537|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AB063105|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1##AF151805|TRNT1|51095|tRNA nucleotidyl transferase, CCA-adding, 1	0.0	
chr5	173205448	173205515	reg1032385.p1	3.641	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-161808	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-161853	-	BC003114 TSC_hg19_v1_chr5_-_173043602	-161884	-	TSC_hg19_v1_chr5_+_173315343 NM_030627	109897	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	210709	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	267230	+	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein	0.0	
chr6	135323500	135323608	reg1036288.p1	3.641	+	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	-52322	-	TSC_hg19_v1_chr6_+_134758857 AK055166	-564706	+	AK055077 NM_001143676	-684359	-	CU674720 EU831981 EU832074 TSC_hg19_v1_chr6_-_135375948 BC040849 AJ420551 BC001465	52334	-	TSC_hg19_v1_chr6_-_135375958 AK024258 AK295545 AF161394 U87791 AJ459826 AJ459827 NM_001145158 NM_001145207 NM_006620	52440	-	TSC_hg19_v1_chr6_+_135502445 AJ606317 AJ606318 AJ606319 AJ606320 AJ606321 AJ606322 AJ606323 AJ606324 NM_001130172 NM_001130173 NM_001161656 NM_001161657 NM_001161658 NM_001161659 NM_001161660 NM_005375 X52125	178894	+	AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK055166|LOC154092|154092|uncharacterized LOC154092##AK055077|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_001143676|SGK1|6446|serum/glucocorticoid regulated kinase 1##EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)##EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)##BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)##BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)##AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)##AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)##AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)##U87791|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	0.990771	CTCF.p2:1:0.991
chr6	14241322	14241389	reg1041746.p1	3.641	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-123333	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-123450	+	NM_001251901	-123869	+	TSC_hg19_v1_chr6_+_15245702 AK302624	1004362	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	1005057	+	BC033996 TSC_hg19_v1_chr6_-_15248900	1007546	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.163505	
chr7	107844336	107844513	reg1026741.p2	3.641	+	BC142619 BC140804 BC144591 AF028816 AK300385 NM_007356	-73632	-	AB384752 TSC_hg19_v1_chr7_-_107643594 BC113455 M61916 BX648251 AK303501 AK309921 AK307611 BC044633 BC052598 NM_002291	-200819	-	AK300077 TSC_hg19_v1_chr7_+_107531630 AK225289 AK310220 AB209703 BC018648 BC018696 J03620 AB529125 CU676276	-312768	+	AJ001057 AB385311 NM_001037132	36128	-	TSC_hg19_v1_chr7_-_108096830 BC114570 BC115736 AB002341 BX538010 AK299870 BC098401 NM_001193582 NM_001193583 NM_001193584 NM_005010	252505	-	TSC_hg19_v1_chr7_-_108142934 BC005203 AK002115	298548	-	BC142619|LAMB4|22798|laminin, beta 4##BC140804|LAMB4|22798|laminin, beta 4##BC144591|LAMB4|22798|laminin, beta 4##AF028816|LAMB4|22798|laminin, beta 4##AK300385|LAMB4|22798|laminin, beta 4##NM_007356|LAMB4|22798|laminin, beta 4##BC113455|LAMB1|3912|laminin, beta 1##M61916|LAMB1|3912|laminin, beta 1##BX648251|LAMB1|3912|laminin, beta 1##AK303501|LAMB1|3912|laminin, beta 1##AK309921|LAMB1|3912|laminin, beta 1##AK307611|LAMB1|3912|laminin, beta 1##BC044633|LAMB1|3912|laminin, beta 1##BC052598|LAMB1|3912|laminin, beta 1##NM_002291|LAMB1|3912|laminin, beta 1##AK300077|DLD|1738|dihydrolipoamide dehydrogenase##AK225289|DLD|1738|dihydrolipoamide dehydrogenase##AK310220|DLD|1738|dihydrolipoamide dehydrogenase##AB209703|DLD|1738|dihydrolipoamide dehydrogenase##BC018648|DLD|1738|dihydrolipoamide dehydrogenase##BC018696|DLD|1738|dihydrolipoamide dehydrogenase##J03620|DLD|1738|dihydrolipoamide dehydrogenase##AJ001057|NRCAM|4897|neuronal cell adhesion molecule##NM_001037132|NRCAM|4897|neuronal cell adhesion molecule##BC114570|NRCAM|4897|neuronal cell adhesion molecule##BC115736|NRCAM|4897|neuronal cell adhesion molecule##AB002341|NRCAM|4897|neuronal cell adhesion molecule##BX538010|NRCAM|4897|neuronal cell adhesion molecule##AK299870|NRCAM|4897|neuronal cell adhesion molecule##BC098401|NRCAM|4897|neuronal cell adhesion molecule##NM_001193582|NRCAM|4897|neuronal cell adhesion molecule##NM_001193583|NRCAM|4897|neuronal cell adhesion molecule##NM_001193584|NRCAM|4897|neuronal cell adhesion molecule##NM_005010|NRCAM|4897|neuronal cell adhesion molecule##BC005203|PNPLA8|50640|patatin-like phospholipase domain containing 8##AK002115|PNPLA8|50640|patatin-like phospholipase domain containing 8	0.011335	
chr7	5581274	5581351	reg1038453.p2	3.641	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-11103	-	TSC_hg19_v1_chr7_-_5569235 BC012854 CU680416 EF095209 BC008633 DQ471327 AB385102 DQ890960 DQ894128 K00790	-12066	-	BC113036 TSC_hg19_v1_chr7_-_5568855	-12471	-	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	51126	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	51198	+	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	239910	-	X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##BC012854|ACTB|60|actin, beta##EF095209|ACTB|60|actin, beta##BC008633|ACTB|60|actin, beta##DQ471327|ACTB|60|actin, beta##DQ890960|ACTB|60|actin, beta##DQ894128|ACTB|60|actin, beta##K00790|ACTB|60|actin, beta##BC113036|ACTB|60|actin, beta##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216	0.0	
chr11	3888644	3888817	reg1040827.p2	3.640	+	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	-11801	+	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	-26531	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	-26575	-	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	227259	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	227336	+	TSC_hg19_v1_chr11_+_4116085 AK297988 BC006498 CU675435 DQ893028 DQ896272	227429	+	NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1##X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1##AK297988|RRM1|6240|ribonucleotide reductase M1##BC006498|RRM1|6240|ribonucleotide reductase M1##DQ893028|RRM1|6240|ribonucleotide reductase M1##DQ896272|RRM1|6240|ribonucleotide reductase M1	0.0	
chr11	629357	629459	reg1042306.p1	3.640	+	NM_021920	-2236	-	AF276242 AF301909 TSC_hg19_v1_chr11_-_624945 AY358368 BC038405 AK000226 AK300991 AK308040 AK309157 AK000384 NM_001171968 NM_021924 NM_031264 AF258678 AF258679	-4374	-	NM_001572 NM_004029 TSC_hg19_v1_chr11_-_616001	-13407	-	TSC_hg19_v1_chr11_+_637268 EU432112 L12398 NM_000797 S76942	7878	+	AB489172 AF068892 AF068893 AF068894 AF068895 AF068896 AF068897 AF007165 TSC_hg19_v1_chr11_-_694998	65512	-	TSC_hg19_v1_chr11_-_695046 AK289873 EU831436 EU831528	65620	-	NM_021920|SCT|6343|secretin##AF276242|CDHR5|53841|cadherin-related family member 5##AF301909|CDHR5|53841|cadherin-related family member 5##AY358368|CDHR5|53841|cadherin-related family member 5##BC038405|CDHR5|53841|cadherin-related family member 5##AK000226|CDHR5|53841|cadherin-related family member 5##AK300991|CDHR5|53841|cadherin-related family member 5##AK308040|CDHR5|53841|cadherin-related family member 5##AK309157|CDHR5|53841|cadherin-related family member 5##AK000384|CDHR5|53841|cadherin-related family member 5##NM_001171968|CDHR5|53841|cadherin-related family member 5##NM_021924|CDHR5|53841|cadherin-related family member 5##NM_031264|CDHR5|53841|cadherin-related family member 5##AF258678|CDHR5|53841|cadherin-related family member 5##AF258679|CDHR5|53841|cadherin-related family member 5##NM_001572|IRF7|3665|interferon regulatory factor 7##NM_004029|IRF7|3665|interferon regulatory factor 7##EU432112|DRD4|1815|dopamine receptor D4##L12398|DRD4|1815|dopamine receptor D4##NM_000797|DRD4|1815|dopamine receptor D4##S76942|DRD4|1815|dopamine receptor D4##AF068892|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068893|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068894|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068895|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068896|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF068897|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AF007165|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AK289873|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##EU831436|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##EU831528|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)	0.014767	
chr12	43895643	43895732	reg1037324.p1	3.640	+	BC114939 BC114940 AF399844 AF543759 AF543760 AK056499 TSC_hg19_v1_chr12_-_42983549 NM_153026	-912195	-	TSC_hg19_v1_chr12_-_42877811 NM_001144882 NM_001144883	-1017888	-	AK122881 TSC_hg19_v1_chr12_-_42877772	-1017929	-	AF488804 AJ515153 AJ515154 NM_025003	50036	-	AL136759 TSC_hg19_v1_chr12_-_44152566 BX647494 NM_001098615 AK097331 AK225903 NM_001098614 BC020781 CR627435 BC068502 AK092030 AX747323 NM_031292	256888	-	AK304583 NM_001114182 NM_001145256 NM_001145257 NM_001145258 NM_016123 AK299944 AK314288 TSC_hg19_v1_chr12_+_44152757	257064	+	BC114939|PRICKLE1|144165|prickle homolog 1 (Drosophila)##BC114940|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF399844|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543759|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF543760|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK056499|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_153026|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144882|PRICKLE1|144165|prickle homolog 1 (Drosophila)##NM_001144883|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AK122881|PRICKLE1|144165|prickle homolog 1 (Drosophila)##AF488804|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AJ515153|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AJ515154|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##NM_025003|ADAMTS20|80070|ADAM metallopeptidase with thrombospondin type 1 motif, 20##AL136759|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BX647494|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098615|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK097331|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK225903|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_001098614|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC020781|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##CR627435|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##BC068502|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK092030|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##NM_031292|PUS7L|83448|pseudouridylate synthase 7 homolog (S. cerevisiae)-like##AK304583|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001114182|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145256|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145257|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_001145258|IRAK4|51135|interleukin-1 receptor-associated kinase 4##NM_016123|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK299944|IRAK4|51135|interleukin-1 receptor-associated kinase 4##AK314288|IRAK4|51135|interleukin-1 receptor-associated kinase 4	0.972597	CTCF.p2:-14:0.973
chr14	93626835	93627015	reg1022285.p2	3.640	+	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	-44711	-	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	-45334	-	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-237328	+	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	24275	-	TSC_hg19_v1_chr14_-_93651243 NM_022151	24320	-	AK315522 TSC_hg19_v1_chr14_-_93651261	24343	-	BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1##NM_022151|MOAP1|64112|modulator of apoptosis 1##AK315522|MOAP1|64112|modulator of apoptosis 1	0.0	
chr15	44969738	44969812	reg1032608.p1	3.640	+	BC036924 NM_001145112	-690	-	TSC_hg19_v1_chr15_-_44955887 BC150640 NM_001160227 NM_025137	-13895	-	TSC_hg19_v1_chr15_-_44955849 AB385508 AB470308 AB470309 AB470310 AB058743 BC153879 BC047416	-13931	-	AK130783 TSC_hg19_v1_chr15_-_45003540	33771	-	TSC_hg19_v1_chr15_+_45003710 NM_004048 AK303560 AK315776 S82297 S82300 S54761 BC032589 BC064910 X07621 AY007153 AB021288 AB463439 AY187687 CR457066 DQ839493 DQ839494 DQ884406 DQ890551 DQ893711 V00567	33946	+	AK311550 TSC_hg19_v1_chr15_+_45021275 DQ232883	51478	+	BC036924|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##NM_001145112|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##BC150640|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_001160227|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_025137|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_004048|B2M|567|beta-2-microglobulin##AK303560|B2M|567|beta-2-microglobulin##AK315776|B2M|567|beta-2-microglobulin##S82297|B2M|567|beta-2-microglobulin##S82300|B2M|567|beta-2-microglobulin##S54761|B2M|567|beta-2-microglobulin##BC032589|B2M|567|beta-2-microglobulin##BC064910|B2M|567|beta-2-microglobulin##X07621|B2M|567|beta-2-microglobulin##AY007153|B2M|567|beta-2-microglobulin##AB021288|B2M|567|beta-2-microglobulin##AY187687|B2M|567|beta-2-microglobulin##CR457066|B2M|567|beta-2-microglobulin##DQ839493|B2M|567|beta-2-microglobulin##DQ839494|B2M|567|beta-2-microglobulin##DQ884406|B2M|567|beta-2-microglobulin##DQ890551|B2M|567|beta-2-microglobulin##DQ893711|B2M|567|beta-2-microglobulin##V00567|B2M|567|beta-2-microglobulin##DQ232883|TRIM69|140691|tripartite motif containing 69	0.0	
chr16	11170040	11170107	reg1036919.p1	3.640	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-131630	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-133838	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-133907	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	179977	-	X63758 BC096135 BC096136 BC096137 NM_005425	193065	-	NM_021247	197378	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr16	21658625	21658775	reg1034586.p2	3.640	+	AF151839 TSC_hg19_v1_chr16_+_21611174	-47546	+	TSC_hg19_v1_chr16_+_21610912 NM_001077180 NM_016025 AJ278577 AJ278578 AK074529 BC000195 AK313077 AK075022 AK075237	-47810	+	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	-126948	-	TSC_hg19_v1_chr16_-_21663930 DQ892013 DQ895202 EU176227 EU176324 AK313860 AK223286 AK290910 AK293703 BC017844	5220	-	AJ223183 TSC_hg19_v1_chr16_-_21663991 NM_005849	5276	-	BC129993 NM_144672 BC129992	31135	+	AF151839|METTL9|51108|methyltransferase like 9##NM_001077180|METTL9|51108|methyltransferase like 9##NM_016025|METTL9|51108|methyltransferase like 9##AJ278577|METTL9|51108|methyltransferase like 9##AJ278578|METTL9|51108|methyltransferase like 9##AK074529|METTL9|51108|methyltransferase like 9##BC000195|METTL9|51108|methyltransferase like 9##AK313077|METTL9|51108|methyltransferase like 9##AK075022|METTL9|51108|methyltransferase like 9##AK075237|METTL9|51108|methyltransferase like 9##BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2##DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6##DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6##EU176227|IGSF6|10261|immunoglobulin superfamily, member 6##EU176324|IGSF6|10261|immunoglobulin superfamily, member 6##AK313860|IGSF6|10261|immunoglobulin superfamily, member 6##AK223286|IGSF6|10261|immunoglobulin superfamily, member 6##AK290910|IGSF6|10261|immunoglobulin superfamily, member 6##AK293703|IGSF6|10261|immunoglobulin superfamily, member 6##BC017844|IGSF6|10261|immunoglobulin superfamily, member 6##AJ223183|IGSF6|10261|immunoglobulin superfamily, member 6##NM_005849|IGSF6|10261|immunoglobulin superfamily, member 6##BC129993|OTOA|146183|otoancorin##NM_144672|OTOA|146183|otoancorin##BC129992|OTOA|146183|otoancorin	0.0	
chr17	4718688	4718782	reg1037200.p1	3.640	+	NM_001243108 NM_002663 TSC_hg19_v1_chr17_+_4710443 BC015033 AK304246 AK314797 BC056871	-8289	+	TSC_hg19_v1_chr17_+_4699478 AK311768 D29012 AB464088 BT009809 CR457065 DQ891216 DQ894399	-19254	+	BC000835 TSC_hg19_v1_chr17_+_4699472	-19264	+	TSC_hg19_v1_chr17_+_4736660 NM_001024937 NM_015716 NM_153827 NM_170663 BC034673 AB209450 AB041926 BC094686 DQ891158 DQ894339 AB035698 AY775058	18010	+	AK309386 AK128415 NM_001145536	84171	+	NM_000080 X66403	87633	-	NM_001243108|PLD2|5338|phospholipase D2##NM_002663|PLD2|5338|phospholipase D2##BC015033|PLD2|5338|phospholipase D2##AK304246|PLD2|5338|phospholipase D2##AK314797|PLD2|5338|phospholipase D2##BC056871|PLD2|5338|phospholipase D2##AK311768|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##D29012|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##BT009809|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##CR457065|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##DQ891216|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##DQ894399|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##BC000835|PSMB6|5694|proteasome (prosome, macropain) subunit, beta type, 6##NM_001024937|MINK1|50488|misshapen-like kinase 1##NM_015716|MINK1|50488|misshapen-like kinase 1##NM_153827|MINK1|50488|misshapen-like kinase 1##NM_170663|MINK1|50488|misshapen-like kinase 1##BC034673|MINK1|50488|misshapen-like kinase 1##AB209450|MINK1|50488|misshapen-like kinase 1##AB041926|MINK1|50488|misshapen-like kinase 1##BC094686|MINK1|50488|misshapen-like kinase 1##DQ891158|MINK1|50488|misshapen-like kinase 1##DQ894339|MINK1|50488|misshapen-like kinase 1##AB035698|MINK1|50488|misshapen-like kinase 1##AY775058|MINK1|50488|misshapen-like kinase 1##AK309386|C17orf107|100130311|chromosome 17 open reading frame 107##AK128415|C17orf107|100130311|chromosome 17 open reading frame 107##NM_001145536|C17orf107|100130311|chromosome 17 open reading frame 107##NM_000080|CHRNE|1145|cholinergic receptor, nicotinic, epsilon##X66403|CHRNE|1145|cholinergic receptor, nicotinic, epsilon	0.022584	
chr2	143553864	143554010	reg1036885.p2	3.640	+	AF176832 NM_018557	-664668	-	TSC_hg19_v1_chr2_-_142888540 AK054663	-665381	-	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	-4016131	-	NM_001032998 NM_001199241 NM_003937 AK223426 TSC_hg19_v1_chr2_+_143635213 U57721	81269	+	BC000879 TSC_hg19_v1_chr2_+_143635232 AK292095 AK315343 AK290900	81303	+	NM_018460 BC029346 TSC_hg19_v1_chr2_+_143886947 AK308219 AF212222 AF217507 AF217522 AY219338 AK226014	332993	+	AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##NM_001032998|KYNU|8942|kynureninase##NM_001199241|KYNU|8942|kynureninase##NM_003937|KYNU|8942|kynureninase##AK223426|KYNU|8942|kynureninase##U57721|KYNU|8942|kynureninase##BC000879|KYNU|8942|kynureninase##AK292095|KYNU|8942|kynureninase##AK315343|KYNU|8942|kynureninase##AK290900|KYNU|8942|kynureninase##NM_018460|ARHGAP15|55843|Rho GTPase activating protein 15##AK308219|ARHGAP15|55843|Rho GTPase activating protein 15##AF212222|ARHGAP15|55843|Rho GTPase activating protein 15##AF217507|ARHGAP15|55843|Rho GTPase activating protein 15##AF217522|ARHGAP15|55843|Rho GTPase activating protein 15##AY219338|ARHGAP15|55843|Rho GTPase activating protein 15##AK226014|ARHGAP15|55843|Rho GTPase activating protein 15	0.990116	CTCF.p2:-15:0.990
chr4	39611285	39611406	reg1033892.p2	3.640	+	TSC_hg19_v1_chr4_+_39529635 AK056558	-81719	+	TSC_hg19_v1_chr4_-_39529187 NM_001184700 NM_001184701 NM_003359	-82170	-	TSC_hg19_v1_chr4_-_39529060 AF061016 AJ007702 BC022781 AK097930 AK297737	-82338	-	TSC_hg19_v1_chr4_-_39640486 AK023351 BC008502 NM_174921 AK307146	29211	-	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	88459	+	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	367993	-	NM_001184700|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001184701|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_003359|UGDH|7358|UDP-glucose 6-dehydrogenase##AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase##AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase##BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase##AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase##AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase##AK023351|C4orf34|201895|chromosome 4 open reading frame 34##BC008502|C4orf34|201895|chromosome 4 open reading frame 34##NM_174921|C4orf34|201895|chromosome 4 open reading frame 34##AK307146|C4orf34|201895|chromosome 4 open reading frame 34##NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	0.0	
chr5	32542898	32543078	reg1029427.p2	3.640	+	TSC_hg19_v1_chr5_-_32444845 AK292214 AK309638 BC017879 NM_016107	-98052	-	TSC_hg19_v1_chr5_-_32444820 BC107417 AJ314790 BC030540 BC137084 BC137085	-98210	-	TSC_hg19_v1_chr5_-_32403324 BC062986 BC051893	-139635	-	NM_006713 TSC_hg19_v1_chr5_+_32585676 AK294124 AK311754 BC022339 AK307268 BC009610 BC018189 BC071655 BC063402 BC010537 BC105972 AB209285	42668	+	NM_001204376 AK300094 AK308301	167762	+	AK290870 NM_000908 NM_001204375 M59305	168500	+	AK292214|ZFR|51663|zinc finger RNA binding protein##AK309638|ZFR|51663|zinc finger RNA binding protein##BC017879|ZFR|51663|zinc finger RNA binding protein##NM_016107|ZFR|51663|zinc finger RNA binding protein##BC107417|ZFR|51663|zinc finger RNA binding protein##AJ314790|ZFR|51663|zinc finger RNA binding protein##BC030540|ZFR|51663|zinc finger RNA binding protein##BC137084|ZFR|51663|zinc finger RNA binding protein##BC137085|ZFR|51663|zinc finger RNA binding protein##BC062986|ZFR|51663|zinc finger RNA binding protein##BC051893|ZFR|51663|zinc finger RNA binding protein##NM_006713|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK294124|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK311754|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC022339|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK307268|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC009610|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC018189|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC071655|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC063402|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC010537|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC105972|SUB1|10923|SUB1 homolog (S. cerevisiae)##AB209285|SUB1|10923|SUB1 homolog (S. cerevisiae)##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)	0.01464	
chr7	101634360	101634467	reg1031738.p1	3.640	+	M74099 NM_181552	-173532	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-175204	+	BC002778 NM_138403	-361838	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	293984	+	TSC_hg19_v1_chr7_+_101928431 AB000520	294030	+	NM_001146210	362475	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.079327	
chr9	139622670	139622769	reg1027156.p2	3.640	+	BC061888 TSC_hg19_v1_chr9_-_139622638 BC055011 BC059956 AK054908 AK090585 BC042369 BC042667	-96	-	TSC_hg19_v1_chr9_+_139607008 NM_152421 BC032097 CU689268	-15703	+	TSC_hg19_v1_chr9_-_139581926 NM_001012727 NM_006412	-40804	-	AY301271 BC133045 BC144440 BC144441 BC171741 NM_001001712	14663	-	TSC_hg19_v1_chr9_+_139640611 AK128864	17892	+	BC026910 AY301269 HQ257933 AY358598 AF303084 BC062746 NM_198946	20222	-	BC061888|SNHG7|84973|small nucleolar RNA host gene 7 (non-protein coding)##BC055011|SNHG7|84973|small nucleolar RNA host gene 7 (non-protein coding)##BC059956|SNHG7|84973|small nucleolar RNA host gene 7 (non-protein coding)##AK054908|SNORA43|677824|small nucleolar RNA, H/ACA box 43##AK090585|SNHG7|84973|small nucleolar RNA host gene 7 (non-protein coding)##BC042369|SNHG7|84973|small nucleolar RNA host gene 7 (non-protein coding)##BC042667|SNHG7|84973|small nucleolar RNA host gene 7 (non-protein coding)##NM_152421|FAM69B|138311|family with sequence similarity 69, member B##BC032097|FAM69B|138311|family with sequence similarity 69, member B##NM_001012727|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##NM_006412|AGPAT2|10555|1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)##AY301271|LCN10|414332|lipocalin 10##BC133045|LCN10|414332|lipocalin 10##BC144440|LCN10|414332|lipocalin 10##BC144441|LCN10|414332|lipocalin 10##BC171741|LCN10|414332|lipocalin 10##NM_001001712|LCN10|414332|lipocalin 10##AK128864|LOC100128593|100128593|uncharacterized LOC100128593##AY301269|LCN6|158062|lipocalin 6##HQ257933|LCN6|158062|lipocalin 6##AY358598|LCN6|158062|lipocalin 6##AF303084|LCN6|158062|lipocalin 6##BC062746|LCN6|158062|lipocalin 6##NM_198946|LCN6|158062|lipocalin 6	0.561263	CTCF.p2:0:0.561
chr9	44654904	44654984	reg1032493.p1	3.640	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-970101	+	NM_001145196	-1024215	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-1521457	-	TSC_hg19_v1_chr9_+_45441926 BC006438	786982	+	BC040528 NM_001113541 NM_015667	20854665	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	21802357	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.397076	CTCF.p2:1:0.397
chr10	73843817	73843940	reg1046740.p2	3.639	+	TSC_hg19_v1_chr10_+_73723993 AB017915 NM_004273 AB012192	-119821	+	TSC_hg19_v1_chr10_-_73611059 NM_001042465 NM_001042466 NM_002778	-232787	-	AK299184 TSC_hg19_v1_chr10_-_73611043	-232835	-	AK292328 TSC_hg19_v1_chr10_-_73848270 AK294008 AK307091	4390	-	TSC_hg19_v1_chr10_-_73848286 AY358921	4404	-	TSC_hg19_v1_chr10_-_73848310 AJ001453	4462	-	AB017915|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_004273|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##AB012192|CHST3|9469|carbohydrate (chondroitin 6) sulfotransferase 3##NM_001042465|PSAP|5660|prosaposin##NM_001042466|PSAP|5660|prosaposin##NM_002778|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin##AK292328|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK294008|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK307091|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AY358921|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AJ001453|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2	0.0	
chr14	76006691	76006800	reg1038974.p1	3.639	+	TSC_hg19_v1_chr14_+_75988840 D42106	-17893	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	-17955	+	BC051303 NM_001135049	-107909	+	NM_017791 AY260572 AY260577 BC019087 AK000378	38220	+	AK297002 NM_001195283	65059	+	AF134159 TSC_hg19_v1_chr14_-_76127220 AK311764 AL136658 AF136971 AF161406 BC002444	120451	-	D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK297002|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##NM_001195283|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AF134159|C14orf1|11161|chromosome 14 open reading frame 1##AK311764|C14orf1|11161|chromosome 14 open reading frame 1##AL136658|C14orf1|11161|chromosome 14 open reading frame 1##AF136971|C14orf1|11161|chromosome 14 open reading frame 1##AF161406|C14orf1|11161|chromosome 14 open reading frame 1##BC002444|C14orf1|11161|chromosome 14 open reading frame 1	0.0	
chr16	11449109	11449290	reg1023302.p2	3.639	+	TSC_hg19_v1_chr16_+_11439315 BC013040	-9881	+	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	-9905	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-74057	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	230988	-	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	231590	-	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	313099	+	BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin	0.514859	CTCF.p2:30:0.515
chr17	47815649	47815813	reg1041949.p2	3.639	+	BX641166 TSC_hg19_v1_chr17_-_47785555	-30181	-	TSC_hg19_v1_chr17_-_47785283 AK296073 D87989 NM_005827 BC011888 AK293563	-30433	-	AK098056 CU680094 DQ893425 EU176812 TSC_hg19_v1_chr17_-_47785254	-30538	-	AF123073 BC065199 TSC_hg19_v1_chr17_-_47841483	25748	-	NM_030802 BC037572 TSC_hg19_v1_chr17_-_47841551	25815	-	NM_001199155 NM_001199156 NM_001199157 NM_001199158 NM_007067 TSC_hg19_v1_chr17_+_47866042 AK293976 AK294014 AK023890 AK294052 AK294836 AF140360	50287	+	BX641166|SLC35B1|10237|solute carrier family 35, member B1##AK296073|SLC35B1|10237|solute carrier family 35, member B1##D87989|SLC35B1|10237|solute carrier family 35, member B1##NM_005827|SLC35B1|10237|solute carrier family 35, member B1##BC011888|SLC35B1|10237|solute carrier family 35, member B1##AK293563|SLC35B1|10237|solute carrier family 35, member B1##AK098056|SLC35B1|10237|solute carrier family 35, member B1##DQ893425|SLC35B1|10237|solute carrier family 35, member B1##EU176812|SLC35B1|10237|solute carrier family 35, member B1##AF123073|FAM117A|81558|family with sequence similarity 117, member A##BC065199|FAM117A|81558|family with sequence similarity 117, member A##NM_030802|FAM117A|81558|family with sequence similarity 117, member A##BC037572|FAM117A|81558|family with sequence similarity 117, member A##NM_001199155|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199156|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199157|KAT7|11143|K(lysine) acetyltransferase 7##NM_001199158|KAT7|11143|K(lysine) acetyltransferase 7##NM_007067|KAT7|11143|K(lysine) acetyltransferase 7##AK293976|KAT7|11143|K(lysine) acetyltransferase 7##AK294014|KAT7|11143|K(lysine) acetyltransferase 7##AK023890|KAT7|11143|K(lysine) acetyltransferase 7##AK294052|KAT7|11143|K(lysine) acetyltransferase 7##AK294836|KAT7|11143|K(lysine) acetyltransferase 7##AF140360|KAT7|11143|K(lysine) acetyltransferase 7	0.0	
chr19	1000211	1000312	reg1033644.p2	3.639	+	TSC_hg19_v1_chr19_+_984344 NM_024100 BC000040 BC001648 CU674808	-15927	+	TSC_hg19_v1_chr19_+_926038 AY845638 BC060828 NM_005224	-74250	+	TSC_hg19_v1_chr19_+_917306 BC141812 NM_032551 AY253982 BC140825 AB051065 AF343725 AJ309020 AY029541 AY253981 BC111094 EU883577	-82868	+	TSC_hg19_v1_chr19_+_1000312 AY507106 AY507107 NM_138690	104	+	DQ893224 DQ896554 CU679197 TSC_hg19_v1_chr19_-_1021121 BC008957 DQ005958	20797	-	TSC_hg19_v1_chr19_-_1021123 AK095756 NM_001033026 NM_033420	20907	-	NM_024100|WDR18|57418|WD repeat domain 18##BC000040|WDR18|57418|WD repeat domain 18##BC001648|WDR18|57418|WD repeat domain 18##AY845638|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC060828|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_005224|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC141812|KISS1R|84634|KISS1 receptor##NM_032551|KISS1R|84634|KISS1 receptor##AY253982|KISS1R|84634|KISS1 receptor##BC140825|KISS1R|84634|KISS1 receptor##AB051065|KISS1R|84634|KISS1 receptor##AF343725|KISS1R|84634|KISS1 receptor##AJ309020|KISS1R|84634|KISS1 receptor##AY029541|KISS1R|84634|KISS1 receptor##AY253981|KISS1R|84634|KISS1 receptor##EU883577|KISS1R|84634|KISS1 receptor##AY507106|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##AY507107|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_138690|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##DQ893224|C19orf6|91304|chromosome 19 open reading frame 6##DQ896554|C19orf6|91304|chromosome 19 open reading frame 6##BC008957|C19orf6|91304|chromosome 19 open reading frame 6##DQ005958|C19orf6|91304|chromosome 19 open reading frame 6##AK095756|C19orf6|91304|chromosome 19 open reading frame 6##NM_001033026|C19orf6|91304|chromosome 19 open reading frame 6##NM_033420|C19orf6|91304|chromosome 19 open reading frame 6	0.647518	CTCF.p2:-11:0.217	CTCF.p2:-44:0.431
chr2	153718018	153718125	reg1036270.p2	3.639	+	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-142927	+	BC028741 TSC_hg19_v1_chr2_+_153575133	-142940	+	TSC_hg19_v1_chr2_+_153575123 AK315657	-142956	+	AK311958 BC002908 AK074808 AB043585 NM_019845	617180	-	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	1010373	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	1837118	+	BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##BC028741|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK315657|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3	0.903856	CTCF.p2:-17:0.904
chr2	85788873	85788943	reg1035331.p2	3.639	+	TSC_hg19_v1_chr2_-_85788644 NM_000821 NM_001142269	-253	-	CU680718 DQ892948 DQ896196 EU847509 TSC_hg19_v1_chr2_-_85788597 BC013979 AK310483 AK297397 BC004422 AK222827 AK225663 AK298982 AK313126 M81592	-317	-	TSC_hg19_v1_chr2_+_85766291 AK291126 BC001686 BC001854 X68836 DQ083239 AB529143 CU674832	-22558	+	NM_003761 TSC_hg19_v1_chr2_+_85804673	15741	+	TSC_hg19_v1_chr2_+_85804705 BC001634	15795	+	TSC_hg19_v1_chr2_+_85804738 AF053233	15826	+	NM_000821|GGCX|2677|gamma-glutamyl carboxylase##NM_001142269|GGCX|2677|gamma-glutamyl carboxylase##DQ892948|GGCX|2677|gamma-glutamyl carboxylase##DQ896196|GGCX|2677|gamma-glutamyl carboxylase##EU847509|GGCX|2677|gamma-glutamyl carboxylase##BC013979|GGCX|2677|gamma-glutamyl carboxylase##AK310483|GGCX|2677|gamma-glutamyl carboxylase##AK297397|GGCX|2677|gamma-glutamyl carboxylase##BC004422|GGCX|2677|gamma-glutamyl carboxylase##AK222827|GGCX|2677|gamma-glutamyl carboxylase##AK225663|GGCX|2677|gamma-glutamyl carboxylase##AK298982|GGCX|2677|gamma-glutamyl carboxylase##AK313126|GGCX|2677|gamma-glutamyl carboxylase##M81592|GGCX|2677|gamma-glutamyl carboxylase##AK291126|MAT2A|4144|methionine adenosyltransferase II, alpha##BC001686|MAT2A|4144|methionine adenosyltransferase II, alpha##BC001854|MAT2A|4144|methionine adenosyltransferase II, alpha##X68836|MAT2A|4144|methionine adenosyltransferase II, alpha##DQ083239|MAT2A|4144|methionine adenosyltransferase II, alpha##NM_003761|VAMP8|8673|vesicle-associated membrane protein 8 (endobrevin)##BC001634|VAMP8|8673|vesicle-associated membrane protein 8 (endobrevin)##AF053233|VAMP8|8673|vesicle-associated membrane protein 8 (endobrevin)	0.047141	
chr4	164466741	164466853	reg1036245.p2	3.639	+	TSC_hg19_v1_chr4_+_164415868 BC011842	-50924	+	AK002046 BC005204 TSC_hg19_v1_chr4_+_164415841	-50955	+	TSC_hg19_v1_chr4_+_164415817 BC017418 AK298235	-50981	+	AB463878 AK000675 AK301408 NM_017923	67918	-	NM_012403	652065	-	AK289711 NM_001166373	837609	-	BC011842|C4orf43|55319|chromosome 4 open reading frame 43##AK002046|C4orf43|55319|chromosome 4 open reading frame 43##BC005204|C4orf43|55319|chromosome 4 open reading frame 43##BC017418|C4orf43|55319|chromosome 4 open reading frame 43##AK298235|C4orf43|55319|chromosome 4 open reading frame 43##AK000675|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##AK301408|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_017923|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_012403|ANP32C|23520|acidic (leucine-rich) nuclear phosphoprotein 32 family, member C##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1	0.0	
chr4	36589534	36589601	reg1034635.p1	3.639	+	BC157885 NM_001170700	-303924	+	AK131492 NM_001136536 AK304357 AK316523	-306321	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	-343530	-	NM_001144990	657122	+	NM_001104629 BC037906	866008	+	AK001879 NM_018302 AK225192	996302	+	BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_001144990|KIAA1239|57495|KIAA1239##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19	0.0	
chr7	151560591	151560771	reg1041851.p2	3.639	+	BC068598 TSC_hg19_v1_chr7_-_151511929 NM_001040633	-48741	-	TSC_hg19_v1_chr7_-_151329284 BT007127 BC020540 AB025580 AF087875 AK314646 AK001887 NM_024429	-231401	-	TSC_hg19_v1_chr7_-_151216982 BC107705 AK125446 BC016155 NM_005614	-343696	-	AK074675 NM_016203	13581	-	NM_145292 AF440404 AK315667 AK093091 AX747915 BC022021 AF440400 BC025391	92817	+	TSC_hg19_v1_chr7_+_151722782 NM_022087	162116	+	BC068598|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_001040633|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BT007127|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC020540|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AB025580|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AF087875|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK314646|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##AK001887|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_024429|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##BC107705|RHEB|6009|Ras homolog enriched in brain##AK125446|RHEB|6009|Ras homolog enriched in brain##BC016155|RHEB|6009|Ras homolog enriched in brain##NM_005614|RHEB|6009|Ras homolog enriched in brain##AK074675|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_016203|PRKAG2|51422|protein kinase, AMP-activated, gamma 2 non-catalytic subunit##NM_145292|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440404|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK315667|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AK093091|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC022021|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##AF440400|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##BC025391|GALNTL5|168391|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5##NM_022087|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)	0.856627	CTCF.p2:-3:0.857
chr8	128575924	128576095	reg1035409.p2	3.639	+	DQ486513 NM_001159542	-148153	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-1005285	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-1005454	-	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	172316	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	172481	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	230774	+	DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)	0.0	
chrX	70327911	70327978	reg1042313.p1	3.639	+	NM_001025265	-1307	-	TSC_hg19_v1_chrX_+_70316026 NM_001170931 NM_005938 AK300142 X93996 BC106761 AB463650 AF384029	-11937	+	BT007203 TSC_hg19_v1_chrX_-_70288224 BC080535 AF171229 BC103847 BC103848 BC020559 NM_013346 AK312977	-39744	-	AB102794 AB102797 AB102793 AB102795 CU677147 DQ895451 EU176337 TSC_hg19_v1_chrX_-_70331422 AB463801 BC014972 BC071710 D11086 AK314932 AK298656 NM_000206	3444	-	TSC_hg19_v1_chrX_+_70338445 AK302543 NM_005120 AF071309	10560	+	NM_001166660 NM_018977 NM_181303 BX641059 TSC_hg19_v1_chrX_+_70364698 BC028738 AK299669	36745	+	NM_001025265|CXorf65|158830|chromosome X open reading frame 65##NM_001170931|FOXO4|4303|forkhead box O4##NM_005938|FOXO4|4303|forkhead box O4##X93996|FOXO4|4303|forkhead box O4##BC106761|FOXO4|4303|forkhead box O4##AF384029|FOXO4|4303|forkhead box O4##BT007203|SNX12|29934|sorting nexin 12##BC080535|SNX12|29934|sorting nexin 12##AF171229|SNX12|29934|sorting nexin 12##BC103847|SNX12|29934|sorting nexin 12##BC103848|SNX12|29934|sorting nexin 12##BC020559|SNX12|29934|sorting nexin 12##NM_013346|SNX12|29934|sorting nexin 12##AK312977|SNX12|29934|sorting nexin 12##AB102794|IL2RG|3561|interleukin 2 receptor, gamma##AB102797|IL2RG|3561|interleukin 2 receptor, gamma##AB102793|IL2RG|3561|interleukin 2 receptor, gamma##AB102795|IL2RG|3561|interleukin 2 receptor, gamma##DQ895451|IL2RG|3561|interleukin 2 receptor, gamma##EU176337|IL2RG|3561|interleukin 2 receptor, gamma##BC014972|IL2RG|3561|interleukin 2 receptor, gamma##BC071710|IL2RG|3561|interleukin 2 receptor, gamma##D11086|IL2RG|3561|interleukin 2 receptor, gamma##AK314932|IL2RG|3561|interleukin 2 receptor, gamma##AK298656|IL2RG|3561|interleukin 2 receptor, gamma##NM_000206|IL2RG|3561|interleukin 2 receptor, gamma##AK302543|MED12|9968|mediator complex subunit 12##NM_005120|MED12|9968|mediator complex subunit 12##AF071309|MED12|9968|mediator complex subunit 12##NM_001166660|NLGN3|54413|neuroligin 3##NM_018977|NLGN3|54413|neuroligin 3##NM_181303|NLGN3|54413|neuroligin 3##BX641059|NLGN3|54413|neuroligin 3##BC028738|NLGN3|54413|neuroligin 3##AK299669|NLGN3|54413|neuroligin 3	0.0	
chr11	123942060	123942162	reg1015838.p1	3.638	+	AB529276 NM_001004463	-32404	-	BC136917 BC136920 NM_001004464	-41799	+	NM_001001953	-48392	+	TSC_hg19_v1_chr11_+_123986156 AY366503 AY366504 AY366505 AY366506 AY366507 AY366508 NM_001130142 NM_014622 NM_198315 BC001234 AK291698 AK295247	44023	+	BC136638 BC136639 NM_001007249	153259	+	AB463982 NM_001002905	178311	+	NM_001004463|OR10G7|390265|olfactory receptor, family 10, subfamily G, member 7##BC136917|OR10G8|219869|olfactory receptor, family 10, subfamily G, member 8##BC136920|OR10G8|219869|olfactory receptor, family 10, subfamily G, member 8##NM_001004464|OR10G8|219869|olfactory receptor, family 10, subfamily G, member 8##NM_001001953|OR10G9|219870|olfactory receptor, family 10, subfamily G, member 9##AY366503|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366504|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366505|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366506|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366507|VWA5A|4013|von Willebrand factor A domain containing 5A##AY366508|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_001130142|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_014622|VWA5A|4013|von Willebrand factor A domain containing 5A##NM_198315|VWA5A|4013|von Willebrand factor A domain containing 5A##BC001234|VWA5A|4013|von Willebrand factor A domain containing 5A##AK291698|VWA5A|4013|von Willebrand factor A domain containing 5A##AK295247|VWA5A|4013|von Willebrand factor A domain containing 5A##BC136638|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2##BC136639|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2##NM_001007249|OR8G2|26492|olfactory receptor, family 8, subfamily G, member 2##NM_001002905|OR8G1|26494|olfactory receptor, family 8, subfamily G, member 1	0.0	
chr11	18490665	18490774	reg1040872.p2	3.638	+	AY581313 BC014340 NM_001144071 NM_144972 AK131523	-13318	+	TSC_hg19_v1_chr11_+_18433884 NM_002301 NM_017448 AY286300 U13680 BC064388 J02938 BC019249 BC090043 AF401094 AF401095 AF401096 AF401097 AK058181	-56832	+	NM_001165414 TSC_hg19_v1_chr11_+_18417926 AK298834	-72833	+	AB464330 DQ892792 DQ896039 CU677988 AY207473 AY207474 TSC_hg19_v1_chr11_-_18548471 BC002487 U82130 AK130787 NM_006292	57713	-	TSC_hg19_v1_chr11_-_18610229 AK295501 BC011011 BC064566 AF503350 AK296835 AK316191 AK301537 NM_001040697 NM_018314 AK314521	119532	-	TSC_hg19_v1_chr11_-_18655915 BC056261 BX641102	165186	-	AY581313|LDHAL6A|160287|lactate dehydrogenase A-like 6A##BC014340|LDHAL6A|160287|lactate dehydrogenase A-like 6A##NM_001144071|LDHAL6A|160287|lactate dehydrogenase A-like 6A##NM_144972|LDHAL6A|160287|lactate dehydrogenase A-like 6A##AK131523|LDHAL6A|160287|lactate dehydrogenase A-like 6A##NM_002301|LDHC|3948|lactate dehydrogenase C##NM_017448|LDHC|3948|lactate dehydrogenase C##AY286300|LDHC|3948|lactate dehydrogenase C##U13680|LDHC|3948|lactate dehydrogenase C##BC064388|LDHC|3948|lactate dehydrogenase C##J02938|LDHC|3948|lactate dehydrogenase C##BC019249|LDHC|3948|lactate dehydrogenase C##BC090043|LDHC|3948|lactate dehydrogenase C##AF401094|LDHC|3948|lactate dehydrogenase C##AF401095|LDHC|3948|lactate dehydrogenase C##AF401096|LDHC|3948|lactate dehydrogenase C##AF401097|LDHC|3948|lactate dehydrogenase C##AK058181|LDHC|3948|lactate dehydrogenase C##NM_001165414|LDHA|3939|lactate dehydrogenase A##AK298834|LDHA|3939|lactate dehydrogenase A##DQ892792|TSG101|7251|tumor susceptibility gene 101##DQ896039|TSG101|7251|tumor susceptibility gene 101##AY207473|TSG101|7251|tumor susceptibility gene 101##AY207474|TSG101|7251|tumor susceptibility gene 101##BC002487|TSG101|7251|tumor susceptibility gene 101##U82130|TSG101|7251|tumor susceptibility gene 101##AK130787|TSG101|7251|tumor susceptibility gene 101##NM_006292|TSG101|7251|tumor susceptibility gene 101##AK295501|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##BC011011|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##BC064566|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##AF503350|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##AK296835|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##AK316191|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##AK301537|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##NM_001040697|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##NM_018314|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##AK314521|UEVLD|55293|UEV and lactate/malate dehyrogenase domains##BC056261|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)##BX641102|SPTY2D1|144108|SPT2, Suppressor of Ty, domain containing 1 (S. cerevisiae)	0.0	
chr13	47167771	47167843	reg1038799.p2	3.638	+	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-40300	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-40387	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	-40484	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	203508	-	AK314132 BX647777 AK302787 NM_000621 NM_001165947	303260	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1407644	-	HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.0	
chr19	16740042	16740108	reg1035846.p1	3.638	+	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	-1075	-	TSC_hg19_v1_chr19_+_16683381 AK094229	-56678	+	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	-56879	-	TSC_hg19_v1_chr19_-_16770944 AK025602 BC069279 BX648276	30854	-	TSC_hg19_v1_chr19_-_16770956 NM_024104	30887	-	TSC_hg19_v1_chr19_+_16771949 AK025981 NM_024074 AK292764 BC001195	31891	+	AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26##BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##AK025602|C19orf42|79086|chromosome 19 open reading frame 42##BC069279|C19orf42|79086|chromosome 19 open reading frame 42##BX648276|C19orf42|79086|chromosome 19 open reading frame 42##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42##AK025981|TMEM38A|79041|transmembrane protein 38A##NM_024074|TMEM38A|79041|transmembrane protein 38A##AK292764|TMEM38A|79041|transmembrane protein 38A##BC001195|TMEM38A|79041|transmembrane protein 38A	0.0	
chr2	36997999	36998123	reg1037668.p2	3.638	+	TSC_hg19_v1_chr2_+_36923944 BC061519 AK056772 AK292149 AY358338 AL832679 AF063833 BC128260	-74101	+	NM_001177969 NM_001177970 NM_001177971 NM_001177972 NM_053276 AK299426 TSC_hg19_v1_chr2_+_36923849	-74215	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	-172779	-	TSC_hg19_v1_chr2_-_37076016 BC015406	77969	-	AB590635 BC106879 AJ223814 BC106878 NM_003162 TSC_hg19_v1_chr2_-_37193662	195574	-	TSC_hg19_v1_chr2_-_37297372 BX538008	299383	-	BC061519|VIT|5212|vitrin##AK056772|VIT|5212|vitrin##AK292149|VIT|5212|vitrin##AY358338|VIT|5212|vitrin##AL832679|VIT|5212|vitrin##AF063833|VIT|5212|vitrin##BC128260|VIT|5212|vitrin##NM_001177969|VIT|5212|vitrin##NM_001177970|VIT|5212|vitrin##NM_001177971|VIT|5212|vitrin##NM_001177972|VIT|5212|vitrin##NM_053276|VIT|5212|vitrin##AK299426|VIT|5212|vitrin##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC015406|STRN|6801|striatin, calmodulin binding protein##BC106879|STRN|6801|striatin, calmodulin binding protein##AJ223814|STRN|6801|striatin, calmodulin binding protein##BC106878|STRN|6801|striatin, calmodulin binding protein##NM_003162|STRN|6801|striatin, calmodulin binding protein##BX538008|HEATR5B|54497|HEAT repeat containing 5B	1.621897	CTCF.p2:-24:0.868	CTCF.p2:32:0.753
chr3	16553364	16553485	reg1033186.p1	3.638	+	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-246716	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	-247035	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-337230	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	1594	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	1800	-	BX648638 AK303026 NM_001190811	92846	-	NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like	0.0	
chr7	102107658	102107740	reg1035994.p2	3.638	+	TSC_hg19_v1_chr7_+_102105459 AB209379 CU688900	-2207	+	TSC_hg19_v1_chr7_+_102105430 AL133057 BC030547 NM_152892 AK290967 AK313771	-2291	+	AK000020 TSC_hg19_v1_chr7_-_102105307 AK026097 AK222689 NM_017621	-2382	-	DQ893151 DQ896446 TSC_hg19_v1_chr7_-_102119367 X98433 BC040116 BC024165 BC141830 BC139902 BC065711 L37127 X82385 AK290515 NM_006234	11644	-	AK302217 NM_001031618 NM_001166339	83979	+	AJ277739 AJ277740 AJ277741 AB384935 BC056864 BC071870 TSC_hg19_v1_chr7_-_102212997 BC044209 BC050598	105288	-	AB209379|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AL133057|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##BC030547|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##NM_152892|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK290967|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK313771|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK000020|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK026097|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK222689|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##NM_017621|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##DQ893151|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##DQ896446|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X98433|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC040116|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC024165|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC141830|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC139902|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC065711|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##L37127|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X82385|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AK290515|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##NM_006234|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##AJ277739|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AJ277740|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277741|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2	0.995304	CTCF.p2:-2:0.995
chr7	27973877	27973981	reg1022420.p1	3.638	+	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-194110	+	BC001764 TSC_hg19_v1_chr7_+_27779809	-194120	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	-194154	+	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	246272	-	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	246477	-	L05913 NM_182899	365010	+	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5	0.051719	
chr1	156691568	156691691	reg1035562.p2	3.637	+	BT019827 CR450357 DQ892265 DQ896851 M68867 BC001109 AB593017 AK312007 TSC_hg19_v1_chr1_-_156675376 NM_001878 NM_001199723	-16207	-	TSC_hg19_v1_chr1_-_156647200 BC032580 BC142611 BC051373 NM_006617 AK025494	-44484	-	TSC_hg19_v1_chr1_+_156611908 AK289759 BC029348 AY007241 BC022938 BC027971 BC035457 BC009117 BC010571 AF228710 AF229053	-79675	+	AY391837 AK022733 NM_030980	6039	-	TSC_hg19_v1_chr1_-_156698238 BC000575 AK095697	6598	-	TSC_hg19_v1_chr1_+_156698260 NM_001142560 NM_015997	6627	+	BT019827|CRABP2|1382|cellular retinoic acid binding protein 2##CR450357|CRABP2|1382|cellular retinoic acid binding protein 2##DQ892265|CRABP2|1382|cellular retinoic acid binding protein 2##DQ896851|CRABP2|1382|cellular retinoic acid binding protein 2##M68867|CRABP2|1382|cellular retinoic acid binding protein 2##BC001109|CRABP2|1382|cellular retinoic acid binding protein 2##AB593017|CRABP2|1382|cellular retinoic acid binding protein 2##AK312007|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001878|CRABP2|1382|cellular retinoic acid binding protein 2##NM_001199723|CRABP2|1382|cellular retinoic acid binding protein 2##BC032580|NES|10763|nestin##BC142611|NES|10763|nestin##BC051373|NES|10763|nestin##NM_006617|NES|10763|nestin##AK025494|NES|10763|nestin##AK289759|BCAN|63827|brevican##BC029348|BCAN|63827|brevican##AY007241|BCAN|63827|brevican##BC022938|BCAN|63827|brevican##BC027971|BCAN|63827|brevican##BC035457|BCAN|63827|brevican##BC009117|BCAN|63827|brevican##BC010571|BCAN|63827|brevican##AF228710|BCAN|63827|brevican##AF229053|BCAN|63827|brevican##AY391837|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK022733|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_030980|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##BC000575|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##AK095697|ISG20L2|81875|interferon stimulated exonuclease gene 20kDa-like 2##NM_001142560|RRNAD1|51093|ribosomal RNA adenine dimethylase domain containing 1##NM_015997|RRNAD1|51093|ribosomal RNA adenine dimethylase domain containing 1	0.0	
chr1	182360340	182360429	reg1038211.p1	3.637	+	TSC_hg19_v1_chr1_-_182360200 BC031964	-163	-	TSC_hg19_v1_chr1_-_182359416 AK092874	-959	-	AY486122 S70290 AB528372 DQ893278 DQ896609 EU832658 EU832735 TSC_hg19_v1_chr1_-_182357935	-2481	-	TSC_hg19_v1_chr1_-_182360477 NM_001033056	154	-	TSC_hg19_v1_chr1_-_182360928 AY947343 BC018992 BC011700 X59834 BC010037 BC011852 Y00387 BC051726 BX537384	551	-	TSC_hg19_v1_chr1_-_182361366 AK122784 NM_001033044 NM_002065	956	-	BC031964|GLUL|2752|glutamate-ammonia ligase##AK092874|GLUL|2752|glutamate-ammonia ligase##AY486122|GLUL|2752|glutamate-ammonia ligase##S70290|GLUL|2752|glutamate-ammonia ligase##DQ893278|GLUL|2752|glutamate-ammonia ligase##DQ896609|GLUL|2752|glutamate-ammonia ligase##EU832658|GLUL|2752|glutamate-ammonia ligase##EU832735|GLUL|2752|glutamate-ammonia ligase##NM_001033056|GLUL|2752|glutamate-ammonia ligase##AY947343|GLUL|2752|glutamate-ammonia ligase##BC018992|GLUL|2752|glutamate-ammonia ligase##BC011700|GLUL|2752|glutamate-ammonia ligase##X59834|GLUL|2752|glutamate-ammonia ligase##BC010037|GLUL|2752|glutamate-ammonia ligase##BC011852|GLUL|2752|glutamate-ammonia ligase##Y00387|GLUL|2752|glutamate-ammonia ligase##BC051726|GLUL|2752|glutamate-ammonia ligase##BX537384|GLUL|2752|glutamate-ammonia ligase##AK122784|GLUL|2752|glutamate-ammonia ligase##NM_001033044|GLUL|2752|glutamate-ammonia ligase##NM_002065|GLUL|2752|glutamate-ammonia ligase	0.0	
chr12	131723955	131724136	reg1031072.p1	3.637	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-285592	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-367334	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-367420	+	TSC_hg19_v1_chr12_+_132195623 BC142980	471568	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	471611	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	588921	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.0	
chr16	70333017	70333101	reg1034045.p2	3.637	+	TSC_hg19_v1_chr16_-_70323413 AK222824 AK225116 AK307782 D32050 NM_001605	-9648	-	BC011451 TSC_hg19_v1_chr16_-_70323364 AK299098	-9692	-	TSC_hg19_v1_chr16_-_70285844 BC052252 NM_058219 BC039194	-47226	-	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	17	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	89	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	47769	+	AK222824|AARS|16|alanyl-tRNA synthetase##AK225116|AARS|16|alanyl-tRNA synthetase##AK307782|AARS|16|alanyl-tRNA synthetase##D32050|AARS|16|alanyl-tRNA synthetase##NM_001605|AARS|16|alanyl-tRNA synthetase##BC011451|AARS|16|alanyl-tRNA synthetase##AK299098|AARS|16|alanyl-tRNA synthetase##BC052252|EXOSC6|118460|exosome component 6##NM_058219|EXOSC6|118460|exosome component 6##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A	0.0	
chr17	591470	591598	reg1030877.p1	3.637	+	TSC_hg19_v1_chr17_+_260159 AK128660 NM_001013672 BC141806 BC057385 BC070116 CU687042	-331354	+	TSC_hg19_v1_chr17_-_202619 NM_001190411 NM_001190412 NM_001190413 NM_006987	-388910	-	TSC_hg19_v1_chr17_-_202589 AK000469 AK291950	-388954	-	CU675257 EU021218 EU434648 EU434649 EU434650 AF246287 AY444797 BC006116 TSC_hg19_v1_chr17_-_618080 BC040223 AF318335 AK290343 AK092532 AX747587 NM_001128159 NM_018289	26505	-	TSC_hg19_v1_chr17_+_635806 AF477201 BC026023 AK025935 AK292065 NM_024792 CU693104 AK125146	44252	+	TSC_hg19_v1_chr17_-_655412 AB463052 AF173856 BC036024 AK302722 BC032084 BC020062	63886	-	AK128660|C17orf97|400566|chromosome 17 open reading frame 97##NM_001013672|C17orf97|400566|chromosome 17 open reading frame 97##BC141806|C17orf97|400566|chromosome 17 open reading frame 97##BC057385|C17orf97|400566|chromosome 17 open reading frame 97##BC070116|C17orf97|400566|chromosome 17 open reading frame 97##NM_001190411|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190412|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190413|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_006987|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AK000469|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AK291950|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##EU021218|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434648|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434649|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434650|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF246287|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AY444797|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC006116|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC040223|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF318335|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK290343|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK092532|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_001128159|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_018289|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF477201|FAM57A|79850|family with sequence similarity 57, member A##BC026023|FAM57A|79850|family with sequence similarity 57, member A##AK025935|FAM57A|79850|family with sequence similarity 57, member A##AK292065|FAM57A|79850|family with sequence similarity 57, member A##NM_024792|FAM57A|79850|family with sequence similarity 57, member A##AK125146|FAM57A|79850|family with sequence similarity 57, member A##AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4##AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4	0.820549	CTCF.p2:35:0.821
chr22	21644567	21644705	reg1007861.p1	3.637	+	BC062565 AJ000730 BC008814 NM_004173 TSC_hg19_v1_chr22_-_21386851	-257785	-	BC064805 NM_001159554 AB002058 CR456535 BC109209 AB528202 CU013135 CU013423 AK309079 NM_005446 BC047287 BC063553 BC033488	-275176	+	TSC_hg19_v1_chr22_+_21356508 AK096901 BC065749	-288155	+	NM_001128633	93026	+	NM_001128635	93403	+	TSC_hg19_v1_chr22_+_21771661 AB028943 NM_015094	127040	+	BC062565|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##AJ000730|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC008814|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##NM_004173|SLC7A4|6545|solute carrier family 7 (orphan transporter), member 4##BC064805|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_001159554|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AB002058|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CR456535|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC109209|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013135|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##CU013423|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK309079|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##NM_005446|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC047287|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC063553|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##BC033488|P2RX6|9127|purinergic receptor P2X, ligand-gated ion channel, 6##AK096901|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##BC065749|THAP7-AS1|439931|THAP7 antisense RNA 1 (non-protein coding)##NM_001128633|RIMBP3C|150221|RIMS binding protein 3C##NM_001128635|RIMBP3B|440804|RIMS binding protein 3B##AB028943|HIC2|23119|hypermethylated in cancer 2##NM_015094|HIC2|23119|hypermethylated in cancer 2	0.0	
chr4	137558692	137558784	reg1038856.p1	3.637	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-2435820	-	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	-3485455	+	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	-3488282	+	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	894854	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	894904	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	1604626	-	NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	0.800036	CTCF.p2:-10:0.800
chr5	121412463	121412603	reg1038768.p1	3.637	+	AK058015 NM_152546 TSC_hg19_v1_chr5_+_121297676 BC031222 CU689120 AY611630	-114842	+	BC034419 NM_177478 HQ258558	-224880	+	TSC_hg19_v1_chr5_+_119800010 AF242769 NM_016644	-1612522	+	AK316309 AK307732 NM_001178102	328	-	S78694 AF039291 AK297709 TSC_hg19_v1_chr5_-_121413955 AK298781 AK311354	1400	-	BC089436 TSC_hg19_v1_chr5_-_121413971 AK312269	1440	-	AK058015|SRFBP1|153443|serum response factor binding protein 1##NM_152546|SRFBP1|153443|serum response factor binding protein 1##BC031222|SRFBP1|153443|serum response factor binding protein 1##AY611630|SRFBP1|153443|serum response factor binding protein 1##BC034419|FTMT|94033|ferritin mitochondrial##NM_177478|FTMT|94033|ferritin mitochondrial##HQ258558|FTMT|94033|ferritin mitochondrial##AF242769|PRR16|51334|proline rich 16##NM_016644|PRR16|51334|proline rich 16##AK316309|LOX|4015|lysyl oxidase##AK307732|LOX|4015|lysyl oxidase##NM_001178102|LOX|4015|lysyl oxidase##S78694|LOX|4015|lysyl oxidase##AF039291|LOX|4015|lysyl oxidase##AK297709|LOX|4015|lysyl oxidase##AK298781|LOX|4015|lysyl oxidase##BC089436|LOX|4015|lysyl oxidase##AK312269|LOX|4015|lysyl oxidase	0.545949	CTCF.p2:9:0.546
chr5	71779398	71779464	reg1039599.p2	3.637	+	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-163209	+	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	-163229	+	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	-163351	-	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	23752	-	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	333059	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	364510	+	BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1	0.0	
chr7	5709838	5709912	reg1030382.p1	3.637	+	BC006304 BC007948 U03057 TSC_hg19_v1_chr7_+_5632493 U09873 BC000521 BC007539 BC007988 DQ891402 DQ894580 CU674252 BT006636	-77365	+	NM_003088 AK095254 TSC_hg19_v1_chr7_+_5632441 AK316607	-77437	+	X00351 BC004251 BC001301 BC002409 BC023204 BC013835 X63432 BC014861 BC013380 BC016045 BC014401 TSC_hg19_v1_chr7_-_5570230 AK025375 AK058019 AK098751 AK130062 AK130157 AK222925 AK223032 AK223055 AK225414 AK301372 AK304552 AK308277 AK309997 AK316361 D28354 NM_001101	-139666	-	AF513717 AF513718 TSC_hg19_v1_chr7_-_5821246	111347	-	BC004947 TSC_hg19_v1_chr7_-_5821284 AK297231 BC063825 AK092767 AX747717 AK297416 BX537406 NM_207111 NM_207116 AK292396	111434	-	TSC_hg19_v1_chr7_+_5862791 AK291169 AK096288	152910	+	BC006304|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007948|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U03057|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##U09873|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC000521|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007539|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BC007988|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ891402|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##DQ894580|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##BT006636|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##NM_003088|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK095254|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##AK316607|FSCN1|6624|fascin homolog 1, actin-bundling protein (Strongylocentrotus purpuratus)##X00351|ACTB|60|actin, beta##BC004251|ACTB|60|actin, beta##BC001301|ACTB|60|actin, beta##BC002409|ACTB|60|actin, beta##BC023204|ACTB|60|actin, beta##BC013835|ACTB|60|actin, beta##X63432|ACTB|60|actin, beta##BC014861|ACTB|60|actin, beta##BC013380|ACTB|60|actin, beta##BC016045|ACTB|60|actin, beta##BC014401|ACTB|60|actin, beta##AK025375|ACTB|60|actin, beta##AK058019|ACTB|60|actin, beta##AK098751|ACTB|60|actin, beta##AK130062|ACTB|60|actin, beta##AK130157|ACTB|60|actin, beta##AK222925|ACTB|60|actin, beta##AK223032|ACTB|60|actin, beta##AK223055|ACTB|60|actin, beta##AK225414|ACTB|60|actin, beta##AK301372|ACTB|60|actin, beta##AK304552|ACTB|60|actin, beta##AK308277|ACTB|60|actin, beta##AK309997|ACTB|60|actin, beta##AK316361|ACTB|60|actin, beta##D28354|ACTB|60|actin, beta##NM_001101|ACTB|60|actin, beta##AF513717|RNF216|54476|ring finger protein 216##AF513718|RNF216|54476|ring finger protein 216##BC004947|RNF216|54476|ring finger protein 216##AK297231|RNF216|54476|ring finger protein 216##BC063825|RNF216|54476|ring finger protein 216##AK092767|RNF216|54476|ring finger protein 216##AK297416|RNF216|54476|ring finger protein 216##BX537406|RNF216|54476|ring finger protein 216##NM_207111|RNF216|54476|ring finger protein 216##NM_207116|RNF216|54476|ring finger protein 216##AK292396|RNF216|54476|ring finger protein 216##AK291169|ZNF815|401303|zinc finger protein 815##AK096288|ZNF815|401303|zinc finger protein 815	0.0	
chr8	76593739	76593875	reg1032663.p1	3.637	+	BX571750 NM_004133 EU832451 HQ692842	-141593	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	-273619	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-696898	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	999703	+	AB083343 TSC_hg19_v1_chr8_+_77593533	999721	+	AK131399 TSC_hg19_v1_chr8_+_77765961	1172082	+	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4##AB083343|ZFHX4|79776|zinc finger homeobox 4##AK131399|ZFHX4|79776|zinc finger homeobox 4	0.023161	
chr11	73722975	73723092	reg1033999.p2	3.636	+	NM_003356 NM_022803	-2752	-	TSC_hg19_v1_chr11_-_73694300 AK025742	-28690	-	TSC_hg19_v1_chr11_-_73693886 AK222540 AK222557 NM_003355	-29148	-	TSC_hg19_v1_chr11_-_73881923 AB231764 AK092089 AX747350 BC037429 NM_015531	159035	-	TSC_hg19_v1_chr11_+_73882299 AK022725	159249	+	TSC_hg19_v1_chr11_+_73882350 BC003046 BC050705 AK225647 AF157028 NM_016147 AK001381	159310	+	NM_003356|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##NM_022803|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##AK025742|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3##AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3##NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3##AK022725|PPME1|51400|protein phosphatase methylesterase 1##BC003046|PPME1|51400|protein phosphatase methylesterase 1##BC050705|PPME1|51400|protein phosphatase methylesterase 1##AK225647|PPME1|51400|protein phosphatase methylesterase 1##AF157028|PPME1|51400|protein phosphatase methylesterase 1##NM_016147|PPME1|51400|protein phosphatase methylesterase 1##AK001381|PPME1|51400|protein phosphatase methylesterase 1	0.0	
chr1	217604906	217604997	reg1032217.p1	3.636	+	CR749497 BX647076 NM_001134285	-293856	-	NM_001243505	-341756	-	AF058291 AK298851 AK291028 BX649009 NM_001243506 NM_206594 NM_206595	-341985	-	AB527654 CU687736 BC042193 TSC_hg19_v1_chr1_-_217804402 BC063474 AK001114 AK291238 NM_018040 BC027719	199431	-	AY963797 AK310291 AK098591 BC014608 NM_138796 TSC_hg19_v1_chr1_+_217804714 EU832110 EU832204	199742	+	NM_016052 TSC_hg19_v1_chr1_+_218458635	853681	+	CR749497|ESRRG|2104|estrogen-related receptor gamma##BX647076|ESRRG|2104|estrogen-related receptor gamma##NM_001134285|ESRRG|2104|estrogen-related receptor gamma##NM_001243505|ESRRG|2104|estrogen-related receptor gamma##AF058291|ESRRG|2104|estrogen-related receptor gamma##AK298851|ESRRG|2104|estrogen-related receptor gamma##AK291028|ESRRG|2104|estrogen-related receptor gamma##BX649009|ESRRG|2104|estrogen-related receptor gamma##NM_001243506|ESRRG|2104|estrogen-related receptor gamma##NM_206594|ESRRG|2104|estrogen-related receptor gamma##NM_206595|ESRRG|2104|estrogen-related receptor gamma##BC042193|GPATCH2|55105|G patch domain containing 2##BC063474|GPATCH2|55105|G patch domain containing 2##AK001114|GPATCH2|55105|G patch domain containing 2##AK291238|GPATCH2|55105|G patch domain containing 2##NM_018040|GPATCH2|55105|G patch domain containing 2##BC027719|GPATCH2|55105|G patch domain containing 2##AY963797|SPATA17|128153|spermatogenesis associated 17##AK310291|SPATA17|128153|spermatogenesis associated 17##AK098591|SPATA17|128153|spermatogenesis associated 17##BC014608|SPATA17|128153|spermatogenesis associated 17##NM_138796|SPATA17|128153|spermatogenesis associated 17##EU832110|SPATA17|128153|spermatogenesis associated 17##EU832204|SPATA17|128153|spermatogenesis associated 17##NM_016052|RRP15|51018|ribosomal RNA processing 15 homolog (S. cerevisiae)	0.0	
chr12	93129087	93129196	reg1037334.p1	3.636	+	NM_001037671 NM_001178097	-32523	+	AJ845168 NM_001025232	-307218	-	AJ845165 AJ845166 NM_001025233	-311407	+	NM_001004330 AK128530	1146	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	193797	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	193902	-	NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1	0.0	
chr18	13611294	13611474	reg1027838.p2	3.636	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-392599	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-620039	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-663320	+	NM_001003674 NM_001003675	280	+	AF009426 AF009427 NM_004338 NM_181483	9482	+	TSC_hg19_v1_chr18_-_13726549 AK055618	115122	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.0	
chr19	2148325	2148448	reg1035219.p1	3.636	+	TSC_hg19_v1_chr19_+_2096982 CU677067 DQ424900 AK294083	-51423	+	TSC_hg19_v1_chr19_+_2096913 AY358444 NM_001031735 NM_001039846 DQ196309 DQ196310 AK301957 AY753639 BC014609 BC040964 BC010443	-51526	+	TSC_hg19_v1_chr19_-_2096297 AL832474	-52092	-	CU679595 AB384738 BC005142 TSC_hg19_v1_chr19_-_2151519	3039	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	3156	-	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	3167	-	DQ424900|IZUMO4|113177|IZUMO family member 4##AK294083|IZUMO4|113177|IZUMO family member 4##AY358444|IZUMO4|113177|IZUMO family member 4##NM_001031735|IZUMO4|113177|IZUMO family member 4##NM_001039846|IZUMO4|113177|IZUMO family member 4##DQ196309|IZUMO4|113177|IZUMO family member 4##DQ196310|IZUMO4|113177|IZUMO family member 4##AK301957|IZUMO4|113177|IZUMO family member 4##AY753639|IZUMO4|113177|IZUMO family member 4##BC014609|IZUMO4|113177|IZUMO family member 4##BC040964|IZUMO4|113177|IZUMO family member 4##BC010443|IZUMO4|113177|IZUMO family member 4##AL832474|MOB3A|126308|MOB kinase activator 3A##BC005142|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit	0.0	
chr2	59981619	59981717	reg1036854.p1	3.636	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-1513186	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-1707680	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-1707914	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	798854	-	AF080216 TSC_hg19_v1_chr2_-_60780784	799110	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	1001816	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.0	
chr3	160389234	160389356	reg1031311.p2	3.636	+	TSC_hg19_v1_chr3_-_160283387 BC034493 NM_002268	-105907	-	TSC_hg19_v1_chr3_-_160283329 BC028691 AK291041	-105975	-	TSC_hg19_v1_chr3_-_160283202 U93240	-106103	-	AK026248 NM_025047 BC034354	5660	+	TSC_hg19_v1_chr3_+_160473386 BC110801	84045	+	AY337264 NM_139245	84700	+	BC034493|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##NM_002268|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##BC028691|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##AK291041|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##U93240|KPNA4|3840|karyopherin alpha 4 (importin alpha 3)##AK026248|ARL14|80117|ADP-ribosylation factor-like 14##NM_025047|ARL14|80117|ADP-ribosylation factor-like 14##BC034354|ARL14|80117|ADP-ribosylation factor-like 14##BC110801|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##AY337264|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L##NM_139245|PPM1L|151742|protein phosphatase, Mg2+/Mn2+ dependent, 1L	0.0	
chr4	25443147	25443222	reg1005091.p1	3.636	+	TSC_hg19_v1_chr4_+_25378893 AK292336 AF191338	-64222	+	TSC_hg19_v1_chr4_+_25378862 NM_013367 BC059383	-64339	+	TSC_hg19_v1_chr4_+_25314405 NM_024936 BC157834 BC171821 AK299211 AK309675 AY629351 BC016914 AF161537 CU677765	-128737	+	NM_001177998 NM_006424 AK292675 AF111856 AK075046 TSC_hg19_v1_chr4_+_25657473 AF146796 BC142704 BC146666	214276	+	NM_001177999 AK314514	214906	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	421370	-	AK292336|ANAPC4|29945|anaphase promoting complex subunit 4##AF191338|ANAPC4|29945|anaphase promoting complex subunit 4##NM_013367|ANAPC4|29945|anaphase promoting complex subunit 4##BC059383|ANAPC4|29945|anaphase promoting complex subunit 4##NM_024936|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC157834|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC171821|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK299211|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AK309675|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AY629351|ZCCHC4|29063|zinc finger, CCHC domain containing 4##BC016914|ZCCHC4|29063|zinc finger, CCHC domain containing 4##AF161537|ZCCHC4|29063|zinc finger, CCHC domain containing 4##NM_001177998|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_006424|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK292675|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF111856|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK075046|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF146796|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC142704|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC146666|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)	0.0	
chr5	174871521	174871588	reg1006725.p1	3.636	+	NM_000794	-392	-	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	-719942	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-1398802	+	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	34008	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	213484	+	TSC_hg19_v1_chr5_+_175085101 AB023487	213557	+	NM_000794|DRD1|1812|dopamine receptor D1##NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2##AB023487|HRH2|3274|histamine receptor H2	0.0	
chr5	41870663	41870794	reg1036631.p2	3.636	+	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	-145	-	AB528366 CR457049 CU679223 DQ891805 DQ894989 TSC_hg19_v1_chr5_-_41870488 AK312327	-254	-	AB464014 TSC_hg19_v1_chr5_-_41510701 AK127142 BX648329 NM_001005473	-360050	-	TSC_hg19_v1_chr5_-_41870706 NM_000436	18	-	TSC_hg19_v1_chr5_+_41904459 BC131721 NM_175921 BX648350	33749	+	AK024075 NM_012176 NM_033484 BC048098 AK001003 BC040011 AF129534 AF176703	54658	+	BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1##CR457049|OXCT1|5019|3-oxoacid CoA transferase 1##DQ891805|OXCT1|5019|3-oxoacid CoA transferase 1##DQ894989|OXCT1|5019|3-oxoacid CoA transferase 1##AK312327|OXCT1|5019|3-oxoacid CoA transferase 1##AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1##BC131721|C5orf51|285636|chromosome 5 open reading frame 51##NM_175921|C5orf51|285636|chromosome 5 open reading frame 51##BX648350|C5orf51|285636|chromosome 5 open reading frame 51##AK024075|FBXO4|26272|F-box protein 4##NM_012176|FBXO4|26272|F-box protein 4##NM_033484|FBXO4|26272|F-box protein 4##BC048098|FBXO4|26272|F-box protein 4##AK001003|FBXO4|26272|F-box protein 4##BC040011|FBXO4|26272|F-box protein 4##AF129534|FBXO4|26272|F-box protein 4##AF176703|FBXO4|26272|F-box protein 4	0.0	
chr9	139664510	139664608	reg1036672.p2	3.636	+	BC093893 BC093895 AY358618 NM_203347	-5598	-	BC130465 BC132714 AK126902 NM_178469 BC042109	-11847	-	BC026910 AY301269 HQ257933 AY358598 AF303084 BC062746 NM_198946	-21618	-	TSC_hg19_v1_chr9_+_139685795 NM_032928 BC007834	21228	+	TSC_hg19_v1_chr9_+_139685818 CU675821	21275	+	NM_001039374 BC064582 BC137317 BC137318	26242	+	BC093893|LCN15|389812|lipocalin 15##BC093895|LCN15|389812|lipocalin 15##AY358618|LCN15|389812|lipocalin 15##NM_203347|LCN15|389812|lipocalin 15##BC130465|LCN8|138307|lipocalin 8##BC132714|LCN8|138307|lipocalin 8##AK126902|LCN8|138307|lipocalin 8##NM_178469|LCN8|138307|lipocalin 8##BC042109|LCN8|138307|lipocalin 8##AY301269|LCN6|158062|lipocalin 6##HQ257933|LCN6|158062|lipocalin 6##AY358598|LCN6|158062|lipocalin 6##AF303084|LCN6|158062|lipocalin 6##BC062746|LCN6|158062|lipocalin 6##NM_198946|LCN6|158062|lipocalin 6##NM_032928|TMEM141|85014|transmembrane protein 141##BC007834|TMEM141|85014|transmembrane protein 141##NM_001039374|KIAA1984|84960|KIAA1984##BC064582|KIAA1984|84960|KIAA1984##BC137317|KIAA1984|84960|KIAA1984##BC137318|KIAA1984|84960|KIAA1984	1.157972	CTCF.p2:34:0.999
chr10	3944539	3944616	reg1025249.p1	3.635	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-117068	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-117266	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-729572	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	923841	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1060937	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1061046	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr11	131056595	131056734	reg1031220.p1	3.635	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-270276	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-270319	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-738002	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	183805	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	723960	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	724675	+	NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin	0.0	
chr1	116830954	116831082	reg1038635.p2	3.635	+	AK096035 NM_152367	-176643	+	TSC_hg19_v1_chr1_+_116519194 BC070033 AY358258 AY145501 CU693234 DQ892367 DQ895576	-311789	+	NM_018420 BC026358 TSC_hg19_v1_chr1_+_116519161	-311875	+	NM_000701 TSC_hg19_v1_chr1_+_116915824	84793	+	BC003077 TSC_hg19_v1_chr1_+_116915881 BC050359	84864	+	TSC_hg19_v1_chr1_+_116915952 AK314777	84930	+	AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)##BC070033|SLC22A15|55356|solute carrier family 22, member 15##AY358258|SLC22A15|55356|solute carrier family 22, member 15##AY145501|SLC22A15|55356|solute carrier family 22, member 15##DQ892367|SLC22A15|55356|solute carrier family 22, member 15##DQ895576|SLC22A15|55356|solute carrier family 22, member 15##NM_018420|SLC22A15|55356|solute carrier family 22, member 15##BC026358|SLC22A15|55356|solute carrier family 22, member 15##NM_000701|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC003077|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC050359|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK314777|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.0	
chr12	752318	752426	reg1038930.p3	3.635	+	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-194	+	AB089940 NM_173593	-182830	+	NM_001130146 NM_032358 AK293165 TSC_hg19_v1_chr12_+_510809 AK027638	-241591	+	TSC_hg19_v1_chr12_-_752800 AK298043	447	-	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	20343	-	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	109784	+	BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AB089940|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_173593|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_001130146|CCDC77|84318|coiled-coil domain containing 77##NM_032358|CCDC77|84318|coiled-coil domain containing 77##AK293165|CCDC77|84318|coiled-coil domain containing 77##AK027638|CCDC77|84318|coiled-coil domain containing 77##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1	1.16249	CTCF.p2:-24:0.838	CTCF.p2:69:0.324
chr1	30196379	30196526	reg1044439.p2	3.635	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-633404	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-639005	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-639072	-	TSC_hg19_v1_chr1_+_31191648 AK057725	995179	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	999980	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	1034180	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	0.0	
chr14	61030296	61030427	reg1037048.p2	3.635	+	BC065831 NM_007374 BC087852 BC069413 AJ011785 EU446644	-54335	+	BC125070 BC125071 AK098187 NM_174978 AL832219	-77588	-	TSC_hg19_v1_chr14_+_60716314 AY236965	-314043	+	BT007083 CU679159 TSC_hg19_v1_chr14_-_61116196 BC008874 NM_005982 X91868	85729	-	AF032107 TSC_hg19_v1_chr14_-_61190584 BC098135 BC098282 BC099722 BC101934 EU446619 EU446844 NM_017420	160293	-	TSC_hg19_v1_chr14_-_61191035 AK309358	160696	-	BC065831|SIX6|4990|SIX homeobox 6##NM_007374|SIX6|4990|SIX homeobox 6##BC087852|SIX6|4990|SIX homeobox 6##BC069413|SIX6|4990|SIX homeobox 6##AJ011785|SIX6|4990|SIX homeobox 6##EU446644|SIX6|4990|SIX homeobox 6##BC125070|C14orf39|317761|chromosome 14 open reading frame 39##BC125071|C14orf39|317761|chromosome 14 open reading frame 39##AK098187|C14orf39|317761|chromosome 14 open reading frame 39##NM_174978|C14orf39|317761|chromosome 14 open reading frame 39##AL832219|C14orf39|317761|chromosome 14 open reading frame 39##AY236965|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BT007083|SIX1|6495|SIX homeobox 1##BC008874|SIX1|6495|SIX homeobox 1##NM_005982|SIX1|6495|SIX homeobox 1##X91868|SIX1|6495|SIX homeobox 1##AF032107|SIX4|51804|SIX homeobox 4##BC098135|SIX4|51804|SIX homeobox 4##BC098282|SIX4|51804|SIX homeobox 4##BC099722|SIX4|51804|SIX homeobox 4##BC101934|SIX4|51804|SIX homeobox 4##EU446619|SIX4|51804|SIX homeobox 4##EU446844|SIX4|51804|SIX homeobox 4##NM_017420|SIX4|51804|SIX homeobox 4##AK309358|SIX4|51804|SIX homeobox 4	0.0	
chr15	22833306	22833487	reg1034687.p2	3.635	+	AK097517 NM_001001413	-97151	+	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	-360174	-	BC136597 BC136598 NM_001005241 DQ786223	-450951	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	74	+	TSC_hg19_v1_chr15_+_22892666 AY763577	59203	+	NM_014608 TSC_hg19_v1_chr15_+_22892685	59293	+	AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AY763577|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1##NM_014608|CYFIP1|23191|cytoplasmic FMR1 interacting protein 1	0.0	
chr16	15317396	15317507	reg1037302.p1	3.635	+	AB527833 AK300253 HQ258337 BC036182 AK314769 AK316520 BC132688 BC132690 BC104660 AJ272050 AF227156 NM_018427 AK225662	-129323	-	CU675948 AF092440 BC017336 NM_173474 AK300557 TSC_hg19_v1_chr16_-_15149897	-167574	-	AY203955 TSC_hg19_v1_chr16_+_15069016 DQ111782	-248419	+	TSC_hg19_v1_chr16_+_15489610 DQ004255 DQ004256 NM_001128423 NM_173803	172150	+	TSC_hg19_v1_chr16_+_15489637 AK096918 AK293380 BC061514	172199	+	AK057180 NM_033201 TSC_hg19_v1_chr16_+_15528363 AK293431 BC008967	210949	+	AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##HQ258337|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AF092440|NTAN1|123803|N-terminal asparagine amidase##BC017336|NTAN1|123803|N-terminal asparagine amidase##NM_173474|NTAN1|123803|N-terminal asparagine amidase##AK300557|NTAN1|123803|N-terminal asparagine amidase##AY203955|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##DQ111782|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##DQ004255|MPV17L|255027|MPV17 mitochondrial membrane protein-like##DQ004256|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_001128423|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_173803|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK096918|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK293380|MPV17L|255027|MPV17 mitochondrial membrane protein-like##BC061514|MPV17L|255027|MPV17 mitochondrial membrane protein-like##AK057180|C16orf45|89927|chromosome 16 open reading frame 45##NM_033201|C16orf45|89927|chromosome 16 open reading frame 45##AK293431|C16orf45|89927|chromosome 16 open reading frame 45##BC008967|C16orf45|89927|chromosome 16 open reading frame 45	0.997195	CTCF.p2:-3:0.997
chr1	6535589	6535700	reg1014582.p1	3.635	+	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	-9442	-	TSC_hg19_v1_chr1_+_6484835 AL136880 NM_031475	-50813	+	AB463714 BC132698 BC136963 BC142687 TSC_hg19_v1_chr1_-_6479976 AK091122 NM_019089	-55714	-	TSC_hg19_v1_chr1_-_6545530 AK299523	9881	-	AB097001 NM_001042665 TSC_hg19_v1_chr1_-_6546016	10370	-	BC015231 NM_001042664	14990	-	U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AL136880|ESPN|83715|espin##NM_031475|ESPN|83715|espin##BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)##NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK299523|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##AB097001|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_001042665|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##BC015231|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5##NM_001042664|PLEKHG5|57449|pleckstrin homology domain containing, family G (with RhoGef domain) member 5	0.999706	
chr16	5684001	5684114	reg1034749.p2	3.635	+	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	-536289	-	NM_019109 TSC_hg19_v1_chr16_+_5121825 AK075373 BC031095 AB019038 BC004402 AK311475 CU678708 DQ895010 EU176309	-562227	+	TSC_hg19_v1_chr16_-_5116030 BC033681 AY358483 NM_001098514 NM_152459	-567970	-	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	385168	+	TSC_hg19_v1_chr16_+_6533765 BC033885	849718	+	AK001027 NM_001142334	1139752	+	BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##NM_019109|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK075373|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC031095|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AB019038|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC004402|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK311475|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##DQ895010|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##EU176309|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC033681|C16orf89|146556|chromosome 16 open reading frame 89##AY358483|C16orf89|146556|chromosome 16 open reading frame 89##NM_001098514|C16orf89|146556|chromosome 16 open reading frame 89##NM_152459|C16orf89|146556|chromosome 16 open reading frame 89##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	0.99723	CTCF.p2:-20:0.997
chr19	11466625	11466805	reg1037751.p2	3.635	+	AK094869 TSC_hg19_v1_chr19_+_11466173 BC009378	-520	+	NM_001170635 NM_022737 TSC_hg19_v1_chr19_+_11466107 AK023117 AY304516 AK225482	-600	+	TSC_hg19_v1_chr19_+_11457247 AK293611 BC038439	-9429	+	BC068071 AK092438 AX747546 NM_175871 BC119677	18658	+	M34986 AB527807 BC112153 BC143697 BC143698 BC143700 AK315097 M60459 BC019092 NM_000121	28234	-	AK074082 TSC_hg19_v1_chr19_-_11529991 BC064475 AK057147 AK293404 AK298281 BC101756 BC111958 BC143530 BC014426 NM_001035223 NM_001161616	63273	-	AK094869|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##BC009378|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##NM_001170635|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##NM_022737|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##AK023117|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##AY304516|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##AK225482|LPPR2|64748|lipid phosphate phosphatase-related protein type 2##AK293611|CCDC159|126075|coiled-coil domain containing 159##BC038439|CCDC159|126075|coiled-coil domain containing 159##BC068071|SWSAP1|126074|SWIM-type zinc finger 7 associated protein 1##AK092438|SWSAP1|126074|SWIM-type zinc finger 7 associated protein 1##NM_175871|SWSAP1|126074|SWIM-type zinc finger 7 associated protein 1##BC119677|SWSAP1|126074|SWIM-type zinc finger 7 associated protein 1##M34986|EPOR|2057|erythropoietin receptor##BC112153|EPOR|2057|erythropoietin receptor##BC143697|EPOR|2057|erythropoietin receptor##BC143698|EPOR|2057|erythropoietin receptor##BC143700|EPOR|2057|erythropoietin receptor##AK315097|EPOR|2057|erythropoietin receptor##M60459|EPOR|2057|erythropoietin receptor##BC019092|EPOR|2057|erythropoietin receptor##NM_000121|EPOR|2057|erythropoietin receptor##BC064475|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK057147|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK293404|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##AK298281|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC101756|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC111958|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC143530|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##BC014426|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##NM_001035223|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3##NM_001161616|RGL3|57139|ral guanine nucleotide dissociation stimulator-like 3	0.0	
chr19	7816195	7816329	reg1039987.p1	3.635	+	AY042221 AY042222 AY042223 AY042224 AY042225 AY042226 AY042227 AY042228 AY042229 AY042230 AY042231 AY042232 AY042233 AB527563 BC110615 AF290886 AK293089 TSC_hg19_v1_chr19_-_7812421 M98457 AK304190 AK313585 NM_001144893 NM_001144894 NM_001144895 NM_001144896 NM_001144897 NM_001144899 NM_021155	-3833	-	AY203939 BC093691 BC093693 BC143309 AY423706 NM_001244856 NM_198492	-19246	-	BC064417 BC062591 AK223207 BC014108 M14766 TSC_hg19_v1_chr19_-_7767004 AK310707 AK310071 M15059 NM_001220500 NM_002002 X04772	-49258	-	NM_001144904 NM_001144905 NM_001144906 NM_001144907 NM_001144908 NM_001144909 NM_001144910 NM_001144911 NM_014257 AK292278 BC038851 AF290887 AK304499 AK314704 AB015629 AF245219 AK298084 AK023750 BC110614 AY343913 DQ893779 AY042234 AY042235 AY042236 AY042237 AY042238 AY042239 AY042240	11831	+	TSC_hg19_v1_chr19_+_7895113 NM_145245 BC014111	78914	+	NM_001159944 AB449874	95144	+	AY042221|CD209|30835|CD209 molecule##AY042222|CD209|30835|CD209 molecule##AY042223|CD209|30835|CD209 molecule##AY042224|CD209|30835|CD209 molecule##AY042225|CD209|30835|CD209 molecule##AY042226|CD209|30835|CD209 molecule##AY042227|CD209|30835|CD209 molecule##AY042228|CD209|30835|CD209 molecule##AY042229|CD209|30835|CD209 molecule##AY042230|CD209|30835|CD209 molecule##AY042231|CD209|30835|CD209 molecule##AY042232|CD209|30835|CD209 molecule##AY042233|CD209|30835|CD209 molecule##BC110615|CD209|30835|CD209 molecule##AF290886|CD209|30835|CD209 molecule##AK293089|CD209|30835|CD209 molecule##M98457|CD209|30835|CD209 molecule##AK304190|CD209|30835|CD209 molecule##AK313585|CD209|30835|CD209 molecule##NM_001144893|CD209|30835|CD209 molecule##NM_001144894|CD209|30835|CD209 molecule##NM_001144895|CD209|30835|CD209 molecule##NM_001144896|CD209|30835|CD209 molecule##NM_001144897|CD209|30835|CD209 molecule##NM_001144899|CD209|30835|CD209 molecule##NM_021155|CD209|30835|CD209 molecule##AY203939|CLEC4G|339390|C-type lectin domain family 4, member G##BC093691|CLEC4G|339390|C-type lectin domain family 4, member G##BC093693|CLEC4G|339390|C-type lectin domain family 4, member G##BC143309|CLEC4G|339390|C-type lectin domain family 4, member G##AY423706|CLEC4G|339390|C-type lectin domain family 4, member G##NM_001244856|CLEC4G|339390|C-type lectin domain family 4, member G##NM_198492|CLEC4G|339390|C-type lectin domain family 4, member G##BC064417|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC062591|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK223207|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##BC014108|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M14766|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310707|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##AK310071|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##M15059|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_001220500|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_002002|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##X04772|FCER2|2208|Fc fragment of IgE, low affinity II, receptor for (CD23)##NM_001144904|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144905|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144906|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144907|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144908|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144909|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144910|CLEC4M|10332|C-type lectin domain family 4, member M##NM_001144911|CLEC4M|10332|C-type lectin domain family 4, member M##NM_014257|CLEC4M|10332|C-type lectin domain family 4, member M##AK292278|CLEC4M|10332|C-type lectin domain family 4, member M##BC038851|CLEC4M|10332|C-type lectin domain family 4, member M##AF290887|CLEC4M|10332|C-type lectin domain family 4, member M##AK304499|CLEC4M|10332|C-type lectin domain family 4, member M##AK314704|CLEC4M|10332|C-type lectin domain family 4, member M##AB015629|CLEC4M|10332|C-type lectin domain family 4, member M##AF245219|CLEC4M|10332|C-type lectin domain family 4, member M##AK298084|CLEC4M|10332|C-type lectin domain family 4, member M##AK023750|CLEC4M|10332|C-type lectin domain family 4, member M##BC110614|CLEC4M|10332|C-type lectin domain family 4, member M##AY343913|CLEC4M|10332|C-type lectin domain family 4, member M##DQ893779|CLEC4M|10332|C-type lectin domain family 4, member M##AY042234|CLEC4M|10332|C-type lectin domain family 4, member M##AY042235|CLEC4M|10332|C-type lectin domain family 4, member M##AY042236|CLEC4M|10332|C-type lectin domain family 4, member M##AY042237|CLEC4M|10332|C-type lectin domain family 4, member M##AY042238|CLEC4M|10332|C-type lectin domain family 4, member M##AY042239|CLEC4M|10332|C-type lectin domain family 4, member M##AY042240|CLEC4M|10332|C-type lectin domain family 4, member M##NM_145245|EVI5L|115704|ecotropic viral integration site 5-like##BC014111|EVI5L|115704|ecotropic viral integration site 5-like##NM_001159944|EVI5L|115704|ecotropic viral integration site 5-like##AB449874|EVI5L|115704|ecotropic viral integration site 5-like	0.0	
chr2	109200713	109200813	reg1001609.p2	3.635	+	TSC_hg19_v1_chr2_+_109150925 AK314217	-49820	+	TSC_hg19_v1_chr2_+_109150916 NM_001193483 AK296992 AF527761	-49898	+	TSC_hg19_v1_chr2_-_109150636 BC004487 AK095987	-50118	-	TSC_hg19_v1_chr2_+_109204761 NM_004987 U09284	3993	+	TSC_hg19_v1_chr2_+_109204792 AF527763	4022	+	TSC_hg19_v1_chr2_+_109204921 BC005341 NM_001193488	4206	+	AK314217|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193483|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK296992|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527761|LIMS1|3987|LIM and senescent cell antigen-like domains 1##BC004487|FLJ38668|644903|uncharacterized LOC644903##AK095987|FLJ38668|644903|uncharacterized LOC644903##NM_004987|LIMS1|3987|LIM and senescent cell antigen-like domains 1##U09284|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527763|LIMS1|3987|LIM and senescent cell antigen-like domains 1##BC005341|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193488|LIMS1|3987|LIM and senescent cell antigen-like domains 1	0.0	
chr3	150353398	150353520	reg1042326.p2	3.635	+	NM_016275 TSC_hg19_v1_chr3_+_150321107 BC006012 AK300315 BC026350 AK075006 AY358095 AF195141 BC008411 BC009611 AY358096 AF131856 BC071699 BC036738 BC009556 CU679417 CU693228 CU691400	-32304	+	BC039424 AK125413 TSC_hg19_v1_chr3_-_150321004	-32483	-	TSC_hg19_v1_chr3_+_150264579 BX647951 AL833101 BC011885 AF497978 AB590213 DQ896788 EU176412 AF172818	-88873	+	AK093375 AX748085 BC036239 BC029577 NM_152394	68270	-	TSC_hg19_v1_chr3_-_150480902 AK223565	127440	-	TSC_hg19_v1_chr3_-_150480936 BC013082	127471	-	NM_016275|SELT|51714|selenoprotein T##BC006012|SELT|51714|selenoprotein T##AK300315|SELT|51714|selenoprotein T##BC026350|SELT|51714|selenoprotein T##AK075006|SELT|51714|selenoprotein T##AY358095|SELT|51714|selenoprotein T##AF195141|SELT|51714|selenoprotein T##BC008411|SELT|51714|selenoprotein T##BC009611|SELT|51714|selenoprotein T##AY358096|SELT|51714|selenoprotein T##AF131856|SELT|51714|selenoprotein T##BC071699|SELT|51714|selenoprotein T##BC036738|SELT|51714|selenoprotein T##BC009556|SELT|51714|selenoprotein T##AK125413|SERP1|27230|stress-associated endoplasmic reticulum protein 1##BX647951|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AL833101|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##BC011885|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AF497978|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##DQ896788|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##EU176412|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AF172818|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AK093375|FAM194A|131831|family with sequence similarity 194, member A##BC036239|FAM194A|131831|family with sequence similarity 194, member A##BC029577|FAM194A|131831|family with sequence similarity 194, member A##NM_152394|FAM194A|131831|family with sequence similarity 194, member A##AK223565|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##BC013082|SIAH2|6478|seven in absentia homolog 2 (Drosophila)	0.0	
chr6	116892417	116892547	reg1038852.p2	3.635	+	NM_001139444	-25710	-	AK300309 AY358252 NM_153036 BC057769 AK056801	-42274	+	BC032556 NM_153711 AK094140 AK315572	-59661	+	AK290727 TSC_hg19_v1_chr6_+_116892562	63	+	TSC_hg19_v1_chr6_+_116892580 NM_001007464 NM_015952 NM_016104	120	+	TSC_hg19_v1_chr6_+_116892666 AK301089 BC012534 AF132958 BC015802	185	+	NM_001139444|BET3L|100128327|BET3 like (S. cerevisiae)##AK300309|FAM26D|221301|family with sequence similarity 26, member D##AY358252|FAM26D|221301|family with sequence similarity 26, member D##NM_153036|FAM26D|221301|family with sequence similarity 26, member D##BC057769|FAM26D|221301|family with sequence similarity 26, member D##AK056801|FAM26D|221301|family with sequence similarity 26, member D##BC032556|FAM26E|254228|family with sequence similarity 26, member E##NM_153711|FAM26E|254228|family with sequence similarity 26, member E##AK094140|FAM26E|254228|family with sequence similarity 26, member E##AK315572|FAM26E|254228|family with sequence similarity 26, member E##AK290727|RWDD1|51389|RWD domain containing 1##NM_001007464|RWDD1|51389|RWD domain containing 1##NM_015952|RWDD1|51389|RWD domain containing 1##NM_016104|RWDD1|51389|RWD domain containing 1##AK301089|RWDD1|51389|RWD domain containing 1##BC012534|RWDD1|51389|RWD domain containing 1##AF132958|RWDD1|51389|RWD domain containing 1##BC015802|RWDD1|51389|RWD domain containing 1	0.0	
chr6	48229537	48229604	reg1036722.p1	3.635	+	TSC_hg19_v1_chr6_-_48078931 AK300335	-150645	-	BC136779 AK123835 AK299301 NM_001013732 NM_207499	-193166	-	BC126194 BC126198 NM_181744 AY377391 AY288419 HQ258199	-479782	+	M65131 BC016282 TSC_hg19_v1_chr6_-_49430938 BX647789 AK312611 AK292568 NM_000255	1201375	-	AK293016 NM_018132 BC016279 TSC_hg19_v1_chr6_+_49431119	1201534	+	AK126371 NM_001010904	1238100	+	AK300335|C6orf138|442213|chromosome 6 open reading frame 138##BC136779|C6orf138|442213|chromosome 6 open reading frame 138##AK123835|C6orf138|442213|chromosome 6 open reading frame 138##AK299301|C6orf138|442213|chromosome 6 open reading frame 138##NM_001013732|C6orf138|442213|chromosome 6 open reading frame 138##NM_207499|C6orf138|442213|chromosome 6 open reading frame 138##BC126194|OPN5|221391|opsin 5##BC126198|OPN5|221391|opsin 5##NM_181744|OPN5|221391|opsin 5##AY377391|OPN5|221391|opsin 5##AY288419|OPN5|221391|opsin 5##HQ258199|OPN5|221391|opsin 5##M65131|MUT|4594|methylmalonyl CoA mutase##BC016282|MUT|4594|methylmalonyl CoA mutase##BX647789|MUT|4594|methylmalonyl CoA mutase##AK312611|MUT|4594|methylmalonyl CoA mutase##AK292568|MUT|4594|methylmalonyl CoA mutase##NM_000255|MUT|4594|methylmalonyl CoA mutase##AK293016|CENPQ|55166|centromere protein Q##NM_018132|CENPQ|55166|centromere protein Q##BC016279|CENPQ|55166|centromere protein Q##NM_001010904|GLYATL3|389396|glycine-N-acyltransferase-like 3	0.0	
chr7	158553807	158553933	reg1029527.p1	3.635	+	BC028618 TSC_hg19_v1_chr7_-_158497496 AK092008 AX747307 BC043404 BX537845 NM_017760	-56393	-	DQ892399 EU176514 U66702 U65065 TSC_hg19_v1_chr7_-_158380485 U81561 AF007555 BC034040 BC071570 NM_002847 NM_130842 NM_130843	-173417	-	TSC_hg19_v1_chr7_+_157647233 BC034557	-906596	+	TSC_hg19_v1_chr7_-_158611303 AK126214	57500	-	TSC_hg19_v1_chr7_-_158622198 AB033054	68321	-	TSC_hg19_v1_chr7_-_158622236 AB527334 AY368150 NM_020728	68390	-	BC028618|NCAPG2|54892|non-SMC condensin II complex, subunit G2##AK092008|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BC043404|NCAPG2|54892|non-SMC condensin II complex, subunit G2##BX537845|NCAPG2|54892|non-SMC condensin II complex, subunit G2##NM_017760|NCAPG2|54892|non-SMC condensin II complex, subunit G2##DQ892399|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##EU176514|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U66702|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U65065|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##U81561|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##AF007555|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034040|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC071570|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_002847|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130842|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##NM_130843|PTPRN2|5799|protein tyrosine phosphatase, receptor type, N polypeptide 2##BC034557|LOC100506585|100506585|uncharacterized LOC100506585##AK126214|ESYT2|57488|extended synaptotagmin-like protein 2##AB033054|ESYT2|57488|extended synaptotagmin-like protein 2##AY368150|ESYT2|57488|extended synaptotagmin-like protein 2##NM_020728|ESYT2|57488|extended synaptotagmin-like protein 2	0.16822	
chr10	7235240	7235338	reg1037730.p1	3.634	+	TSC_hg19_v1_chr10_+_6622460 AY007155	-612809	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	-613028	-	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-990413	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	215961	-	BC144327 AK090887 AX746664 NM_001029880 TSC_hg19_v1_chr10_-_7453453	218145	-	AK027849 TSC_hg19_v1_chr10_-_7659249	423928	-	AY007155|LOC439949|439949|uncharacterized LOC439949##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2##BC144327|SFMBT2|57713|Scm-like with four mbt domains 2##AK090887|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001029880|SFMBT2|57713|Scm-like with four mbt domains 2##AK027849|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5	0.0	
chr11	11640441	11640564	reg1032595.p1	3.634	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-760716	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-760984	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-809705	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	3076	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	222514	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	222989	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.0	
chr1	119829698	119829879	reg1000451.p2	3.634	+	TSC_hg19_v1_chr1_-_119683274 BC021722 CU692202 BC039889 AK223197 AJ242739 AK296799 BC044575 AK313740 AK300295 NM_015836 NM_201263	-146519	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	-146762	+	AK127536 NM_152380	-297610	-	TSC_hg19_v1_chr1_+_119911431 AK298289 NM_001005783 NM_016527 BC020863 AF231917 AF203975 AY513277	81656	+	NM_001166120	127765	+	NM_000198 AK222997 BC038419 AK313413 CR627415 M67466	127973	+	BC021722|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC039889|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK223197|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AJ242739|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK296799|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC044575|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK313740|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK300295|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_015836|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_201263|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15##AK298289|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001005783|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_016527|HAO2|51179|hydroxyacid oxidase 2 (long chain)##BC020863|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF231917|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AF203975|HAO2|51179|hydroxyacid oxidase 2 (long chain)##AY513277|HAO2|51179|hydroxyacid oxidase 2 (long chain)##NM_001166120|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##NM_000198|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK222997|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##BC038419|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##AK313413|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2##M67466|HSD3B2|3284|hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2	0.0	
chr1	157369976	157370080	reg1037866.p1	3.634	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-261745	-	TSC_hg19_v1_chr1_-_157108158 L16464	-261878	-	AK131392 NM_001004341	-300429	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	152202	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	197773	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	300499	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.0	
chr1	38955623	38955710	reg1031332.p1	3.634	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-443217	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-477236	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-477281	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	369720	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	383350	-	AK312811 BC051675 AK123051 NM_030772	391611	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.0	
chr1	42276239	42276378	reg1036618.p2	3.634	+	BC034393 X55177 M65199 NM_001956	-325989	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	-568472	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	-568523	-	TSC_hg19_v1_chr1_-_42384357 BC040942	108034	-	TSC_hg19_v1_chr1_-_42384376 AB046775 BC152563 NM_001127714 NM_024503	108065	-	TSC_hg19_v1_chr1_-_42501606 BC046120	225321	-	BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC040942|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##AB046775|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC152563|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_001127714|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##NM_024503|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3##BC046120|HIVEP3|59269|human immunodeficiency virus type I enhancer binding protein 3	0.040423	
chr14	91224906	91225022	reg1028502.p1	3.634	+	TSC_hg19_v1_chr14_+_90863372 BC011834 BC047523 U16851 BC000454 BC008597 AK289937 M27319	-361537	+	TSC_hg19_v1_chr14_+_90863329 NM_006888	-361641	+	BC008925 BC033136 BC098568 TSC_hg19_v1_chr14_-_90798286 AK000870 AK294958 BC021805 NM_017970	-426598	-	AB527232 TSC_hg19_v1_chr14_-_91282750	57734	-	NM_001010854 TSC_hg19_v1_chr14_-_91282765	57801	-	TSC_hg19_v1_chr14_-_91526731 CU677851	301790	-	BC011834|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC047523|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##U16851|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC000454|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008597|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##AK289937|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##M27319|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##NM_006888|CALM1|801|calmodulin 1 (phosphorylase kinase, delta)##BC008925|C14orf102|55051|chromosome 14 open reading frame 102##BC033136|C14orf102|55051|chromosome 14 open reading frame 102##BC098568|C14orf102|55051|chromosome 14 open reading frame 102##AK000870|C14orf102|55051|chromosome 14 open reading frame 102##AK294958|C14orf102|55051|chromosome 14 open reading frame 102##BC021805|C14orf102|55051|chromosome 14 open reading frame 102##NM_017970|C14orf102|55051|chromosome 14 open reading frame 102##NM_001010854|TTC7B|145567|tetratricopeptide repeat domain 7B	0.451486	CTCF.p2:-36:0.451
chr16	53544352	53544450	reg1011972.p1	3.634	+	TSC_hg19_v1_chr16_-_53537122 AK303503 BC001134 BC095401 AK222743 AK023320 NM_001012398 NM_022476	-7261	-	TSC_hg19_v1_chr16_+_53479685 BX537767	-64713	+	TSC_hg19_v1_chr16_+_53469560 AK300047	-74855	+	TSC_hg19_v1_chr16_-_53737760 BC136433 AK096333 AK308390 BC017977 CR749645 AK307929 EF565106 NM_001127897 NM_015272 AK304790	193356	-	NM_001080432	193473	+	TSC_hg19_v1_chr16_+_53738067 AK096554 AB051539 AK295196	193667	+	AK303503|AKTIP|64400|AKT interacting protein##BC001134|AKTIP|64400|AKT interacting protein##BC095401|AKTIP|64400|AKT interacting protein##AK222743|AKTIP|64400|AKT interacting protein##AK023320|AKTIP|64400|AKT interacting protein##NM_001012398|AKTIP|64400|AKT interacting protein##NM_022476|AKTIP|64400|AKT interacting protein##BX537767|RBL2|5934|retinoblastoma-like 2 (p130)##AK300047|RBL2|5934|retinoblastoma-like 2 (p130)##BC136433|RPGRIP1L|23322|RPGRIP1-like##AK096333|RPGRIP1L|23322|RPGRIP1-like##AK308390|RPGRIP1L|23322|RPGRIP1-like##BC017977|RPGRIP1L|23322|RPGRIP1-like##CR749645|RPGRIP1L|23322|RPGRIP1-like##AK307929|RPGRIP1L|23322|RPGRIP1-like##EF565106|RPGRIP1L|23322|RPGRIP1-like##NM_001127897|RPGRIP1L|23322|RPGRIP1-like##NM_015272|RPGRIP1L|23322|RPGRIP1-like##AK304790|RPGRIP1L|23322|RPGRIP1-like##NM_001080432|FTO|79068|fat mass and obesity associated##AK096554|FTO|79068|fat mass and obesity associated##AB051539|FTO|79068|fat mass and obesity associated##AK295196|FTO|79068|fat mass and obesity associated	0.0	
chr19	10535985	10536128	reg1009045.p3	3.634	+	TSC_hg19_v1_chr19_+_10531189 L20965 NM_001111307	-4826	+	AY593872 NM_001243121 TSC_hg19_v1_chr19_+_10527555	-8553	+	TSC_hg19_v1_chr19_-_10514250 NM_007065	-21800	-	TSC_hg19_v1_chr19_+_10541488 AY618547 NM_001111308	5371	+	AF073745 NM_001111309	7054	+	TSC_hg19_v1_chr19_+_10563605 BC038234 NM_006202 BC019864	27612	+	L20965|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111307|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AY593872|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001243121|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_007065|CDC37|11140|cell division cycle 37 homolog (S. cerevisiae)##AY618547|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111308|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##AF073745|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_001111309|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC038234|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##NM_006202|PDE4A|5141|phosphodiesterase 4A, cAMP-specific##BC019864|PDE4A|5141|phosphodiesterase 4A, cAMP-specific	0.0	
chr21	37876870	37877050	reg1005702.p2	3.634	+	AF314090 AY355348 NM_001146079 NM_144492	-24573	-	BC012126 NM_012130 AY355349	-38229	-	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	-119270	+	AJ566765 NM_001146078	37937	-	AJ566766 NM_001146077	71906	-	BC052313 BC067104 TSC_hg19_v1_chr21_+_38071448	194480	+	AF314090|CLDN14|23562|claudin 14##AY355348|CLDN14|23562|claudin 14##NM_001146079|CLDN14|23562|claudin 14##NM_144492|CLDN14|23562|claudin 14##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AJ566765|CLDN14|23562|claudin 14##NM_001146078|CLDN14|23562|claudin 14##AJ566766|CLDN14|23562|claudin 14##NM_001146077|CLDN14|23562|claudin 14	0.0	
chr2	38079139	38079280	reg1032704.p1	3.634	+	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	-179820	-	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	-180430	-	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-507396	+	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	73223	+	BC024243 NM_001170792	76692	+	NM_001170793 NM_144713 AK057516 AF435956	98391	+	AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1##BC024243|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1	0.0	
chr3	45980547	45980647	reg1001695.p2	3.634	+	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	-52542	+	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	-97002	-	TSC_hg19_v1_chr3_-_45838112 AF125107	-142449	-	NM_006564 Y13248	4375	+	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	56724	-	AB189434 AB189435 NM_001024644 NM_005283	88381	-	NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1	0.0	
chr3	54864865	54864957	reg1035790.p1	3.634	+	TSC_hg19_v1_chr3_+_54156691 AF516696 NM_018398	-708220	+	BC137502 BC137505 TSC_hg19_v1_chr3_+_54156614	-708312	+	TSC_hg19_v1_chr3_-_53925897 AF537132 AK289594 BC013162 AK123406 AF085359 AF161415 NM_021237	-938982	-	BC074741 AF225421 NM_020678	97105	-	TSC_hg19_v1_chr3_-_55514935 CU687936 AB590996 BC074783	650033	-	TSC_hg19_v1_chr3_-_55515377 L20861	650464	-	AF516696|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##NM_018398|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137502|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##BC137505|CACNA2D3|55799|calcium channel, voltage-dependent, alpha 2/delta subunit 3##AF537132|SELK|58515|selenoprotein K##AK289594|SELK|58515|selenoprotein K##BC013162|SELK|58515|selenoprotein K##AK123406|SELK|58515|selenoprotein K##AF085359|SELK|58515|selenoprotein K##AF161415|SELK|58515|selenoprotein K##NM_021237|SELK|58515|selenoprotein K##BC074741|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##AF225421|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##NM_020678|LRTM1|57408|leucine-rich repeats and transmembrane domains 1##BC074783|WNT5A|7474|wingless-type MMTV integration site family, member 5A##L20861|WNT5A|7474|wingless-type MMTV integration site family, member 5A	0.998439	CTCF.p2:-14:0.998
chr5	130707675	130707753	reg1035735.p1	3.634	+	TSC_hg19_v1_chr5_+_130599794 BC058909	-107914	+	AK312406 TSC_hg19_v1_chr5_+_130599768	-107946	+	TSC_hg19_v1_chr5_+_130599764 BC023555 BC050430	-107958	+	AF478468 AF478469 AB527407 TSC_hg19_v1_chr5_-_130970764	263043	-	BC140820 BC144627 TSC_hg19_v1_chr5_-_130970834	263105	-	BC133703 TSC_hg19_v1_chr5_-_130970893 AF394782 AK302640	263164	-	BC058909|CDC42SE2|56990|CDC42 small effector 2##AK312406|CDC42SE2|56990|CDC42 small effector 2##BC023555|CDC42SE2|56990|CDC42 small effector 2##BC050430|CDC42SE2|56990|CDC42 small effector 2##AF478468|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF478469|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC140820|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC144627|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC133703|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF394782|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AK302640|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	0.0	
chr7	8008920	8009003	reg1026728.p4	3.634	+	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	-528	+	BC009868 NM_002947	-250724	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-328588	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	292755	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	292830	-	TSC_hg19_v1_chr7_-_8302174 U38260 L01100 BC008640 BC005922 NM_004968	293212	-	NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa##U38260|ICA1|3382|islet cell autoantigen 1, 69kDa##L01100|ICA1|3382|islet cell autoantigen 1, 69kDa##BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa##BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr8	145014050	145014150	reg1031780.p2	3.634	+	AF330791 TSC_hg19_v1_chr8_-_145013766 AY480051 NM_201384	-397	-	AB051895 NM_031308	-66667	-	TSC_hg19_v1_chr8_-_144923180 BC071605 AK293943 NM_178564	-90941	-	AY480050 NM_201383 TSC_hg19_v1_chr8_-_145016793	2661	-	AF330792 AY480049 TSC_hg19_v1_chr8_-_145018117 NM_201382	4004	-	AY480048 NM_201381	4804	-	AY480051|PLEC|5339|plectin##NM_201384|PLEC|5339|plectin##AB051895|EPPK1|83481|epiplakin 1##NM_031308|EPPK1|83481|epiplakin 1##BC071605|NRBP2|340371|nuclear receptor binding protein 2##AK293943|NRBP2|340371|nuclear receptor binding protein 2##NM_178564|NRBP2|340371|nuclear receptor binding protein 2##AY480050|PLEC|5339|plectin##NM_201383|PLEC|5339|plectin##AF330792|PLEC|5339|plectin##AY480049|PLEC|5339|plectin##NM_201382|PLEC|5339|plectin##AY480048|PLEC|5339|plectin##NM_201381|PLEC|5339|plectin	0.010355	
chr9	114482635	114482751	reg1034492.p2	3.634	+	BC107574 TSC_hg19_v1_chr9_+_114423894 BC010384 BC016319 U31383 BC072671 BC015206 AB463708 AF493877	-58792	+	TSC_hg19_v1_chr9_+_114423856 NM_001017998 NM_001198664	-58831	+	TSC_hg19_v1_chr9_+_114393648 NM_001015882 NM_004125 AK095452 BC048318 AF447177 BC015391 BT007068 DQ891510 DQ894701	-89078	+	BC041858 AK126055 NM_001080551	39109	-	AL833535 NM_173521	63082	-	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	176421	+	BC107574|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC010384|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC016319|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##U31383|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC072671|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##BC015206|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##AF493877|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##NM_001017998|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##NM_001198664|GNG10|2790|guanine nucleotide binding protein (G protein), gamma 10##NM_001015882|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##NM_004125|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##AK095452|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##BC048318|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##AF447177|DNAJC25|548645|DnaJ (Hsp40) homolog, subfamily C , member 25##BC015391|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##BT007068|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##DQ891510|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##DQ894701|DNAJC25-GNG10|552891|DNAJC25-GNG10 readthrough##BC041858|C9orf84|158401|chromosome 9 open reading frame 84##AK126055|C9orf84|158401|chromosome 9 open reading frame 84##NM_001080551|C9orf84|158401|chromosome 9 open reading frame 84##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase	0.0	
chrX	40399021	40399155	reg1022658.p2	3.634	+	BC114220 NM_001123383 NM_001123384	-362507	-	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	-442396	-	TSC_hg19_v1_chrX_+_38663536 AK001248	-1735548	+	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	41098	+	AF291814 TSC_hg19_v1_chrX_+_40440231 AK293510 BC084541 AK297007 AF109363	41154	+	TSC_hg19_v1_chrX_+_40440264 AK314633 AK315948	41184	+	BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF291814|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK293510|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##BC084541|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK297007|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF109363|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK314633|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK315948|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.0	
chr10	104180813	104180913	reg1036816.p2	3.633	+	NM_024326 BC036120	-1284	+	BC039259 TSC_hg19_v1_chr10_-_104179472 AF452641	-1392	-	AB095931 NM_002779 TSC_hg19_v1_chr10_-_104178917	-1955	-	TSC_hg19_v1_chr10_-_104192345 AK094695 BC000262	11477	-	TSC_hg19_v1_chr10_-_104192372 NM_024040	11524	-	BC126459 AK024342 NM_024886	30408	-	NM_024326|FBXL15|79176|F-box and leucine-rich repeat protein 15##BC036120|FBXL15|79176|F-box and leucine-rich repeat protein 15##BC039259|PSD|5662|pleckstrin and Sec7 domain containing##AF452641|PSD|5662|pleckstrin and Sec7 domain containing##AB095931|PSD|5662|pleckstrin and Sec7 domain containing##NM_002779|PSD|5662|pleckstrin and Sec7 domain containing##BC000262|CUEDC2|79004|CUE domain containing 2##NM_024040|CUEDC2|79004|CUE domain containing 2##BC126459|C10orf95|79946|chromosome 10 open reading frame 95##AK024342|C10orf95|79946|chromosome 10 open reading frame 95##NM_024886|C10orf95|79946|chromosome 10 open reading frame 95	0.014762	
chr10	27645244	27645375	reg1041573.p1	3.633	+	TSC_hg19_v1_chr10_-_27531041 AK057469 AF505653 NM_001042473	-114227	-	TSC_hg19_v1_chr10_-_27531030 AB082527	-114294	-	TSC_hg19_v1_chr10_-_27529416 CU688904 AK295031 AK304842 BC025309 BC030555 BC011364 AK294510 NM_145698	-115765	-	JF332167 BC107139 AK126025 NM_001034842	57928	-	TSC_hg19_v1_chr10_+_27793232 AY574034 AK295443 AK297629 AK299457 BC029350 AF087860 BC015014 NM_021252 AL136734 AK223153 AB464117 AF137372 AF498950 AK001555 AM393142 BT009840 CR533455 CU677165	147920	+	BC036207 TSC_hg19_v1_chr10_-_28034752 AK125339 NM_001242702 NM_173576	389452	-	AK057469|ACBD5|91452|acyl-CoA binding domain containing 5##AF505653|ACBD5|91452|acyl-CoA binding domain containing 5##NM_001042473|ACBD5|91452|acyl-CoA binding domain containing 5##AB082527|ACBD5|91452|acyl-CoA binding domain containing 5##AK295031|ACBD5|91452|acyl-CoA binding domain containing 5##AK304842|ACBD5|91452|acyl-CoA binding domain containing 5##BC025309|ACBD5|91452|acyl-CoA binding domain containing 5##BC030555|ACBD5|91452|acyl-CoA binding domain containing 5##BC011364|ACBD5|91452|acyl-CoA binding domain containing 5##AK294510|ACBD5|91452|acyl-CoA binding domain containing 5##NM_145698|ACBD5|91452|acyl-CoA binding domain containing 5##JF332167|PTCHD3|374308|patched domain containing 3##BC107139|PTCHD3|374308|patched domain containing 3##AK126025|PTCHD3|374308|patched domain containing 3##NM_001034842|PTCHD3|374308|patched domain containing 3##AY574034|RAB18|22931|RAB18, member RAS oncogene family##AK295443|RAB18|22931|RAB18, member RAS oncogene family##AK297629|RAB18|22931|RAB18, member RAS oncogene family##AK299457|RAB18|22931|RAB18, member RAS oncogene family##BC029350|RAB18|22931|RAB18, member RAS oncogene family##AF087860|RAB18|22931|RAB18, member RAS oncogene family##BC015014|RAB18|22931|RAB18, member RAS oncogene family##NM_021252|RAB18|22931|RAB18, member RAS oncogene family##AL136734|RAB18|22931|RAB18, member RAS oncogene family##AK223153|RAB18|22931|RAB18, member RAS oncogene family##AF137372|RAB18|22931|RAB18, member RAS oncogene family##AF498950|RAB18|22931|RAB18, member RAS oncogene family##AK001555|RAB18|22931|RAB18, member RAS oncogene family##AM393142|RAB18|22931|RAB18, member RAS oncogene family##BT009840|RAB18|22931|RAB18, member RAS oncogene family##CR533455|RAB18|22931|RAB18, member RAS oncogene family##BC036207|MKX|283078|mohawk homeobox##AK125339|MKX|283078|mohawk homeobox##NM_001242702|MKX|283078|mohawk homeobox##NM_173576|MKX|283078|mohawk homeobox	0.996252	CTCF.p2:-1:0.996
chr11	65208449	65208629	reg1037573.p1	3.633	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	-15016	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	-16139	+	TSC_hg19_v1_chr11_+_65190274 AK026198	-18261	+	TSC_hg19_v1_chr11_+_65265158 EF177381	56664	+	TSC_hg19_v1_chr11_+_65266515 BC025986 BX538238 FJ209305	57962	+	TSC_hg19_v1_chr11_+_65266869 BC104662	58260	+	AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##EF177381|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BC025986|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BX538238|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)	0.0	
chr12	103496300	103496481	reg1031673.p2	3.633	+	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-144298	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-144869	+	L47726 NM_000277 U49897	-185010	-	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	393356	-	AY311388 AJ295695 NM_017564 AB052958	484671	+	AB032773 TSC_hg19_v1_chr12_-_104234857	738434	-	DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3	0.0	
chr16	71392206	71392362	reg1008134.p1	3.633	+	BC034468 TSC_hg19_v1_chr16_-_71323306 AK226169 BX648660 AK315056 NM_001099642 AK123343 AF458590 NM_018348 BC035005	-68983	-	AK000289 TSC_hg19_v1_chr16_-_71318858	-73474	-	TSC_hg19_v1_chr16_-_71264605 BC028351 AK299016 AK299348 NM_001198542 NM_001198543	-127670	-	NM_001740 NM_007088 AK222495 AK222648 AK291096 TSC_hg19_v1_chr16_+_71392625	337	+	TSC_hg19_v1_chr16_+_71392648 BC015484 X56667	360	+	TSC_hg19_v1_chr16_-_71496127 AF507946 BC007256 NM_145911 BC048974 AK091039 AX746746 AK297130	103837	-	BC034468|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK226169|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BX648660|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK315056|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_001099642|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AF458590|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_018348|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BC035005|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK000289|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BC028351|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK299016|HYDIN|54768|hydrocephalus inducing homolog (mouse)##AK299348|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001198542|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001198543|HYDIN|54768|hydrocephalus inducing homolog (mouse)##NM_001740|CALB2|794|calbindin 2##NM_007088|CALB2|794|calbindin 2##AK222495|CALB2|794|calbindin 2##AK222648|CALB2|794|calbindin 2##AK291096|CALB2|794|calbindin 2##BC015484|CALB2|794|calbindin 2##X56667|CALB2|794|calbindin 2##AF507946|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC007256|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_145911|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC048974|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK091039|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK297130|ZNF23|7571|zinc finger protein 23 (KOX 16)	0.0	
chr2	60229782	60229888	reg1034440.p1	3.633	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-1761353	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-1955847	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-1956081	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	550687	-	AF080216 TSC_hg19_v1_chr2_-_60780784	550943	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	753649	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.840695	CTCF.p2:1:0.841
chr2	65034721	65034841	reg1029550.p2	3.633	+	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-153734	-	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-153932	-	TSC_hg19_v1_chr2_+_64751580 AL833962	-283179	+	TSC_hg19_v1_chr2_-_65090764 AK097952	55960	-	TSC_hg19_v1_chr2_-_65159574 BC037562	124796	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	180819	+	D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##AL833962|AFTPH|54812|aftiphilin##BC037562|LOC400958|400958|uncharacterized LOC400958##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.0	
chr3	189838705	189838814	reg1035831.p1	3.633	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	-64	-	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	-331241	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-489500	+	NM_018192	148	-	NM_001134418	1466	-	BC012471 AF114837 AY358652 AF101051 AF134160 AK312866 AK225963 AK296934 TSC_hg19_v1_chr3_-_190040231 NM_021101	201455	-	AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##NM_018192|LEPREL1|55214|leprecan-like 1##NM_001134418|LEPREL1|55214|leprecan-like 1##BC012471|CLDN1|9076|claudin 1##AF114837|CLDN1|9076|claudin 1##AY358652|CLDN1|9076|claudin 1##AF101051|CLDN1|9076|claudin 1##AF134160|CLDN1|9076|claudin 1##AK312866|CLDN1|9076|claudin 1##AK296934|CLDN1|9076|claudin 1##NM_021101|CLDN1|9076|claudin 1	0.0	
chr5	158527515	158527608	reg1039068.p1	3.633	+	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	-819	-	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	-1104	-	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1241471	-	AK304228 NM_001199382	107087	-	AK056513 NM_144726	107272	-	AK311433 AK304435 NM_001199381	107548	-	BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145##AK056513|RNF145|153830|ring finger protein 145##NM_144726|RNF145|153830|ring finger protein 145##AK311433|RNF145|153830|ring finger protein 145##AK304435|RNF145|153830|ring finger protein 145##NM_001199381|RNF145|153830|ring finger protein 145	0.0	
chr6	319448	319580	reg1035935.p1	3.633	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	-27017	+	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	-27429	+	None	None	None	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	72250	+	AF508547 BC101697 BC101699 NM_148959	337439	-	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	373576	-	AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4##AF508547|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101697|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##BC101699|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##NM_148959|HUS1B|135458|HUS1 checkpoint homolog b (S. pombe)##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2	0.0	
chrX	44221774	44221841	reg1044496.p1	3.633	+	CU689086 AK292967 AK026496 AK297714 BC031039 NM_025184 AK291187	-18859	-	NM_000266	-388887	-	AK294306 M69177 TSC_hg19_v1_chrX_-_43741666 BC022494 AK310458 AK312679 NM_000898	-480140	-	TSC_hg19_v1_chrX_-_44402101 BC035015 BC042813 NM_173794	180347	-	AF533018 NM_022076 AF143321 AY121807 AY156515 BC119755 BC119756 CR457159	481506	+	TSC_hg19_v1_chrX_+_44732433 NM_021140 AB208795	510629	+	AK292967|EFHC2|80258|EF-hand domain (C-terminal) containing 2##AK026496|EFHC2|80258|EF-hand domain (C-terminal) containing 2##AK297714|EFHC2|80258|EF-hand domain (C-terminal) containing 2##BC031039|EFHC2|80258|EF-hand domain (C-terminal) containing 2##NM_025184|EFHC2|80258|EF-hand domain (C-terminal) containing 2##AK291187|EFHC2|80258|EF-hand domain (C-terminal) containing 2##NM_000266|NDP|4693|Norrie disease (pseudoglioma)##AK294306|MAOB|4129|monoamine oxidase B##M69177|MAOB|4129|monoamine oxidase B##BC022494|MAOB|4129|monoamine oxidase B##AK310458|MAOB|4129|monoamine oxidase B##AK312679|MAOB|4129|monoamine oxidase B##NM_000898|MAOB|4129|monoamine oxidase B##BC035015|FUNDC1|139341|FUN14 domain containing 1##BC042813|FUNDC1|139341|FUN14 domain containing 1##NM_173794|FUNDC1|139341|FUN14 domain containing 1##AF533018|DUSP21|63904|dual specificity phosphatase 21##NM_022076|DUSP21|63904|dual specificity phosphatase 21##AF143321|DUSP21|63904|dual specificity phosphatase 21##AY121807|DUSP21|63904|dual specificity phosphatase 21##AY156515|DUSP21|63904|dual specificity phosphatase 21##BC119755|DUSP21|63904|dual specificity phosphatase 21##BC119756|DUSP21|63904|dual specificity phosphatase 21##CR457159|DUSP21|63904|dual specificity phosphatase 21##NM_021140|KDM6A|7403|lysine (K)-specific demethylase 6A##AB208795|KDM6A|7403|lysine (K)-specific demethylase 6A	0.66221	CTCF.p2:28:0.662
chr11	27520753	27520924	reg1038983.p1	3.632	+	TSC_hg19_v1_chr11_-_27494323 AB209743 AF257182 BC033039 NM_018490	-26534	-	AF382034 TSC_hg19_v1_chr11_-_27384763 AY598334 CU678989 AK313358 BC008496 AK308494 NM_030771 NM_080654	-136072	-	NM_003986	-458330	+	AB385247 BC053907 TSC_hg19_v1_chr11_-_27528315 BC009774 AK223156 AL833601 AK002077 NM_018362	7474	-	TSC_hg19_v1_chr11_+_27528395 AY054401 AY054402 AY054404 AY513486	7551	+	EF689009 EF689010 NM_001143816 NM_170735	160357	-	AB209743|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF257182|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC033039|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##NM_018490|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF382034|CCDC34|91057|coiled-coil domain containing 34##AY598334|CCDC34|91057|coiled-coil domain containing 34##AK313358|CCDC34|91057|coiled-coil domain containing 34##BC008496|CCDC34|91057|coiled-coil domain containing 34##AK308494|CCDC34|91057|coiled-coil domain containing 34##NM_030771|CCDC34|91057|coiled-coil domain containing 34##NM_080654|CCDC34|91057|coiled-coil domain containing 34##NM_003986|BBOX1|8424|butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1##BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)##BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)##AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)##AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)##AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)##NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)##AY054401|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY054402|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY054404|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY513486|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##EF689009|BDNF|627|brain-derived neurotrophic factor##EF689010|BDNF|627|brain-derived neurotrophic factor##NM_001143816|BDNF|627|brain-derived neurotrophic factor##NM_170735|BDNF|627|brain-derived neurotrophic factor	0.144141	
chr1	1624195	1624376	reg1017333.p1	3.632	+	AB007916 TSC_hg19_v1_chr1_-_1624212 NM_001110781	-68	-	BC092507 TSC_hg19_v1_chr1_-_1624149 AK125619	-127	-	TSC_hg19_v1_chr1_-_1623947 CR936618 BC062371	-320	-	TSC_hg19_v1_chr1_-_1655767 AK303446 AF067518 AF067519 AF067520 AF067521 AF067522 AF067523 AK301495 AK304679 BC009375 AF067512 AF067513 AF067514 AF067515 AF067516 AF067517 AK303451 NM_033486 NM_033487 NM_033488 NM_033489 NM_033492 NM_033493 U04816 U04817 U04818 U04824 U07704 U07705 NM_024011 NM_033529	31491	-	AL049665 NM_001199787 NM_182838 TSC_hg19_v1_chr1_-_1677454 BC110653	53176	-	AK296722 NM_001198995	65795	-	AB007916|SLC35E2B|728661|solute carrier family 35, member E2B##NM_001110781|SLC35E2B|728661|solute carrier family 35, member E2B##BC092507|SLC35E2B|728661|solute carrier family 35, member E2B##AK125619|SLC35E2B|728661|solute carrier family 35, member E2B##CR936618|SLC35E2B|728661|solute carrier family 35, member E2B##BC062371|SLC35E2|9906|solute carrier family 35, member E2##AK303446|CDK11B|984|cyclin-dependent kinase 11B##AF067518|CDK11A|728642|cyclin-dependent kinase 11A##AF067519|CDK11A|728642|cyclin-dependent kinase 11A##AF067520|CDK11A|728642|cyclin-dependent kinase 11A##AF067521|CDK11A|728642|cyclin-dependent kinase 11A##AF067522|CDK11A|728642|cyclin-dependent kinase 11A##AF067523|CDK11A|728642|cyclin-dependent kinase 11A##AK301495|CDK11B|984|cyclin-dependent kinase 11B##AK304679|CDK11B|984|cyclin-dependent kinase 11B##BC009375|CDK11B|984|cyclin-dependent kinase 11B##AF067512|CDK11B|984|cyclin-dependent kinase 11B##AF067513|CDK11B|984|cyclin-dependent kinase 11B##AF067514|CDK11B|984|cyclin-dependent kinase 11B##AF067515|CDK11B|984|cyclin-dependent kinase 11B##AF067516|CDK11B|984|cyclin-dependent kinase 11B##AF067517|CDK11B|984|cyclin-dependent kinase 11B##AK303451|CDK11B|984|cyclin-dependent kinase 11B##NM_033486|CDK11B|984|cyclin-dependent kinase 11B##NM_033487|CDK11B|984|cyclin-dependent kinase 11B##NM_033488|CDK11B|984|cyclin-dependent kinase 11B##NM_033489|CDK11B|984|cyclin-dependent kinase 11B##NM_033492|CDK11B|984|cyclin-dependent kinase 11B##NM_033493|CDK11B|984|cyclin-dependent kinase 11B##U04816|CDK11B|984|cyclin-dependent kinase 11B##U04817|CDK11B|984|cyclin-dependent kinase 11B##U04818|CDK11B|984|cyclin-dependent kinase 11B##U04824|CDK11B|984|cyclin-dependent kinase 11B##U07704|CDK11A|728642|cyclin-dependent kinase 11A##U07705|CDK11A|728642|cyclin-dependent kinase 11A##NM_024011|CDK11A|728642|cyclin-dependent kinase 11A##NM_033529|CDK11A|728642|cyclin-dependent kinase 11A##AL049665|SLC35E2|9906|solute carrier family 35, member E2##NM_001199787|SLC35E2|9906|solute carrier family 35, member E2##NM_182838|SLC35E2|9906|solute carrier family 35, member E2##BC110653|SLC35E2B|728661|solute carrier family 35, member E2B##AK296722|NADK|65220|NAD kinase##NM_001198995|NADK|65220|NAD kinase	0.0	
chr12	121018982	121019116	reg1036843.p2	3.632	+	AK094011 AK097807 TSC_hg19_v1_chr12_+_120972158 AK126274 AK301608 AB027196 BC016622 BC031596 BC101709 BC101715 BC143493 BT006974 CU677651 D87451 DQ890634 DQ893805	-46549	+	TSC_hg19_v1_chr12_+_120972153 NM_014868 AK315558	-46921	+	BC004916 AB590926 TSC_hg19_v1_chr12_-_120966955 BX647562 AK057777 AK222610 AK225242 BC107874 AK315681 EU700459 AK298214 NM_032314 AK293656	-52088	-	AK223206 TSC_hg19_v1_chr12_-_121019185 AK303144 AF070660 AF117232 AJ306296 BC012505 NM_015918 NM_198202	139	-	BC030201 NM_001033677	59372	+	AF169148 AF169149 NM_004276 NM_031205	69321	+	AK094011|RNF10|9921|ring finger protein 10##AK097807|RNF10|9921|ring finger protein 10##AK126274|RNF10|9921|ring finger protein 10##AK301608|RNF10|9921|ring finger protein 10##AB027196|RNF10|9921|ring finger protein 10##BC016622|RNF10|9921|ring finger protein 10##BC031596|RNF10|9921|ring finger protein 10##BC101709|RNF10|9921|ring finger protein 10##BC101715|RNF10|9921|ring finger protein 10##BC143493|RNF10|9921|ring finger protein 10##BT006974|RNF10|9921|ring finger protein 10##D87451|RNF10|9921|ring finger protein 10##DQ890634|RNF10|9921|ring finger protein 10##DQ893805|RNF10|9921|ring finger protein 10##NM_014868|RNF10|9921|ring finger protein 10##AK315558|RNF10|9921|ring finger protein 10##BC004916|COQ5|84274|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)##BX647562|COQ5|84274|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)##AK057777|COQ5|84274|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)##AK222610|COQ5|84274|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)##AK225242|COQ5|84274|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)##BC107874|COQ5|84274|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)##AK315681|COQ5|84274|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)##EU700459|COQ5|84274|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)##AK298214|COQ5|84274|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)##NM_032314|COQ5|84274|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)##AK293656|COQ5|84274|coenzyme Q5 homolog, methyltransferase (S. cerevisiae)##AK223206|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK303144|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF070660|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF117232|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AJ306296|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##BC012505|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015918|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_198202|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##BC030201|CABP1|9478|calcium binding protein 1##NM_001033677|CABP1|9478|calcium binding protein 1##AF169148|CABP1|9478|calcium binding protein 1##AF169149|CABP1|9478|calcium binding protein 1##NM_004276|CABP1|9478|calcium binding protein 1##NM_031205|CABP1|9478|calcium binding protein 1	0.0	
chr13	111124201	111124370	reg1031612.p1	3.632	+	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	-164664	+	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	-164776	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	-321550	-	BX648393 TSC_hg19_v1_chr13_+_111134980	10673	+	AK025912 TSC_hg19_v1_chr13_+_111137262	12979	+	TSC_hg19_v1_chr13_+_111138079 M24766	13803	+	AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BX648393|COL4A2|1284|collagen, type IV, alpha 2##AK025912|COL4A2|1284|collagen, type IV, alpha 2##M24766|COL4A2|1284|collagen, type IV, alpha 2	0.0	
chr13	77477687	77477807	reg1007526.p1	3.632	+	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	-17140	-	BC013764 TSC_hg19_v1_chr13_-_77460431	-17347	-	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-1142907	+	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	88422	+	TSC_hg19_v1_chr13_-_77601295 AL833187 BC063796 BC072448	123535	-	TSC_hg19_v1_chr13_-_77601303 AK314442 NM_012158	123584	-	AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AL833187|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC063796|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC072448|FBXL3|26224|F-box and leucine-rich repeat protein 3##AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3	0.0	
chr15	42264986	42265092	reg1035704.p1	3.632	+	AK074621 AK292634 TSC_hg19_v1_chr15_-_42264753 AK024902 NM_139265	-286	-	TSC_hg19_v1_chr15_-_42264741 CU690850 DQ892745 DQ895991 BC077716 AF454953 BC006287 AF307137 AF323924 BC051823	-323	-	AF233523 NM_016642	-78765	-	NM_001206670	77861	-	AB527201 AB090876 NM_178034	121665	-	BC111481 BC035335 AK122623 BC142682 BC146648 BC131531 AK304368 AK172836 NM_213600	183764	-	AK074621|EHD4|30844|EH-domain containing 4##AK292634|EHD4|30844|EH-domain containing 4##AK024902|EHD4|30844|EH-domain containing 4##NM_139265|EHD4|30844|EH-domain containing 4##DQ892745|EHD4|30844|EH-domain containing 4##DQ895991|EHD4|30844|EH-domain containing 4##BC077716|EHD4|30844|EH-domain containing 4##AF454953|EHD4|30844|EH-domain containing 4##BC006287|EHD4|30844|EH-domain containing 4##AF307137|EHD4|30844|EH-domain containing 4##AF323924|EHD4|30844|EH-domain containing 4##BC051823|EHD4|30844|EH-domain containing 4##AF233523|SPTBN5|51332|spectrin, beta, non-erythrocytic 5##NM_016642|SPTBN5|51332|spectrin, beta, non-erythrocytic 5##NM_001206670|PLA2G4E|123745|phospholipase A2, group IVE##AB090876|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##NM_178034|PLA2G4D|283748|phospholipase A2, group IVD (cytosolic)##BC111481|PLA2G4F|255189|phospholipase A2, group IVF##BC035335|PLA2G4F|255189|phospholipase A2, group IVF##AK122623|PLA2G4F|255189|phospholipase A2, group IVF##BC142682|PLA2G4F|255189|phospholipase A2, group IVF##BC146648|PLA2G4F|255189|phospholipase A2, group IVF##BC131531|PLA2G4F|255189|phospholipase A2, group IVF##AK304368|PLA2G4F|255189|phospholipase A2, group IVF##AK172836|PLA2G4F|255189|phospholipase A2, group IVF##NM_213600|PLA2G4F|255189|phospholipase A2, group IVF	0.719175	CTCF.p2:-5:0.616
chr1	71325065	71325131	reg1039188.p1	3.632	+	TSC_hg19_v1_chr1_+_70876950 NM_001190463 NM_001902 NM_153742 AK310269 AK303946 AK223376 BC015807 S52028 S52784 EU832313 EU832398 BT006882	-448118	+	TSC_hg19_v1_chr1_+_70820493 NM_001031693 NM_001036645 NM_001036646 AF126164 BC010922 AF126163	-504521	+	TSC_hg19_v1_chr1_-_70820406 BC016937 BC028840 AL136717 NM_030816	-504693	-	AB451481 AY387856 AY429108 CU692894 BC118578 BC118659 U13214 U13215 U13216 U13217 U13218 AK290634 L26976 AK315825 L27490 S69326 X83857 X83858 X83859 X83860 X83861 X83862 X83863 L27488 L27489 S69200 D38297 D38298 D38299 D38300 D38301 D86097 D86098 NM_001126044 NM_198714 NM_198715 NM_198716 NM_198717 NM_198718 NM_198719 TSC_hg19_v1_chr1_-_71513500 BC024229	188281	-	CU691764 EU446929 AB209568 TSC_hg19_v1_chr1_-_71546719 AL136945 AK222858 BC010962 AF065391 AF065392 BC033648 BC039814	221609	-	NM_005455 NM_203350	221873	-	NM_001190463|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001902|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_153742|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK310269|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK303946|CTH|1491|cystathionase (cystathionine gamma-lyase)##AK223376|CTH|1491|cystathionase (cystathionine gamma-lyase)##BC015807|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52028|CTH|1491|cystathionase (cystathionine gamma-lyase)##S52784|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832313|CTH|1491|cystathionase (cystathionine gamma-lyase)##EU832398|CTH|1491|cystathionase (cystathionine gamma-lyase)##BT006882|CTH|1491|cystathionase (cystathionine gamma-lyase)##NM_001031693|HHLA3|11147|HERV-H LTR-associating 3##NM_001036645|HHLA3|11147|HERV-H LTR-associating 3##NM_001036646|HHLA3|11147|HERV-H LTR-associating 3##AF126164|HHLA3|11147|HERV-H LTR-associating 3##BC010922|HHLA3|11147|HERV-H LTR-associating 3##AF126163|HHLA3|11147|HERV-H LTR-associating 3##BC016937|ANKRD13C|81573|ankyrin repeat domain 13C##BC028840|ANKRD13C|81573|ankyrin repeat domain 13C##AL136717|ANKRD13C|81573|ankyrin repeat domain 13C##NM_030816|ANKRD13C|81573|ankyrin repeat domain 13C##AB451481|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY387856|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AY429108|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118578|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC118659|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13214|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13215|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13216|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13217|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##U13218|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK290634|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L26976|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##AK315825|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27490|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69326|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83857|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83858|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83859|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83860|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83861|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83862|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##X83863|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27488|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##L27489|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##S69200|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38297|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38298|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38299|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38300|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D38301|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86097|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##D86098|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_001126044|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198714|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198715|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198716|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198717|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198718|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##NM_198719|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##BC024229|PTGER3|5733|prostaglandin E receptor 3 (subtype EP3)##EU446929|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AB209568|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AL136945|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AK222858|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC010962|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065391|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##AF065392|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC033648|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##BC039814|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_005455|ZRANB2|9406|zinc finger, RAN-binding domain containing 2##NM_203350|ZRANB2|9406|zinc finger, RAN-binding domain containing 2	0.0	
chr18	52903927	52903993	reg1029314.p2	3.632	+	AF273051 TSC_hg19_v1_chr18_-_52626693 BC029508 NM_025214	-277273	-	AK058097 NM_001143829	-278682	-	TSC_hg19_v1_chr18_+_52495674 AF329499 NM_004163 BC027474 U57093	-408222	+	FR748222 NM_001243236	65822	-	M74718 FR748220 FR748221 AK300038 NM_001243234 NM_001243235	85042	-	FR748209 M74720 AB209741 TSC_hg19_v1_chr18_-_53068920 AK300636	164878	-	AF273051|CCDC68|80323|coiled-coil domain containing 68##BC029508|CCDC68|80323|coiled-coil domain containing 68##NM_025214|CCDC68|80323|coiled-coil domain containing 68##AK058097|CCDC68|80323|coiled-coil domain containing 68##NM_001143829|CCDC68|80323|coiled-coil domain containing 68##AF329499|RAB27B|5874|RAB27B, member RAS oncogene family##NM_004163|RAB27B|5874|RAB27B, member RAS oncogene family##BC027474|RAB27B|5874|RAB27B, member RAS oncogene family##U57093|RAB27B|5874|RAB27B, member RAS oncogene family##FR748222|TCF4|6925|transcription factor 4##NM_001243236|TCF4|6925|transcription factor 4##M74718|TCF4|6925|transcription factor 4##FR748220|TCF4|6925|transcription factor 4##FR748221|TCF4|6925|transcription factor 4##AK300038|TCF4|6925|transcription factor 4##NM_001243234|TCF4|6925|transcription factor 4##NM_001243235|TCF4|6925|transcription factor 4##FR748209|TCF4|6925|transcription factor 4##AB209741|TCF4|6925|transcription factor 4##AK300636|TCF4|6925|transcription factor 4	0.0	
chr19	42784554	42784709	reg1013816.p2	3.632	+	AK300627 TSC_hg19_v1_chr19_-_42759281 AK314278 NM_006494	-25326	-	AB463618 CU692500 DQ893568 DQ896817 TSC_hg19_v1_chr19_-_42759278 BC022231 U15655	-25417	-	TSC_hg19_v1_chr19_-_42746755 BC027984	-37873	-	TSC_hg19_v1_chr19_+_42788616 AF363689 DQ388764 NM_015125 AB527445	4098	+	BC063021 AK291528 NM_199285	21635	+	AB528706 CR407626 TSC_hg19_v1_chr19_-_42806760 D63391 BC007863 BC003016 NM_002573	22029	-	AK300627|ERF|2077|Ets2 repressor factor##AK314278|ERF|2077|Ets2 repressor factor##NM_006494|ERF|2077|Ets2 repressor factor##DQ893568|ERF|2077|Ets2 repressor factor##DQ896817|ERF|2077|Ets2 repressor factor##BC022231|ERF|2077|Ets2 repressor factor##U15655|ERF|2077|Ets2 repressor factor##BC027984|GSK3A|2931|glycogen synthase kinase 3 alpha##AF363689|CIC|23152|capicua homolog (Drosophila)##NM_015125|CIC|23152|capicua homolog (Drosophila)##BC063021|PRR19|284338|proline rich 19##AK291528|PRR19|284338|proline rich 19##NM_199285|PRR19|284338|proline rich 19##CR407626|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##D63391|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC007863|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##BC003016|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)##NM_002573|PAFAH1B3|5050|platelet-activating factor acetylhydrolase 1b, catalytic subunit 3 (29kDa)	0.0	
chr2	231849675	231849856	reg1029132.p2	3.632	+	BC032694 NM_005683	-59825	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-120043	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-120087	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	11127	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	52472	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	71812	+	BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.012945	
chr3	183272434	183272508	reg1035550.p2	3.632	+	TSC_hg19_v1_chr3_+_183165436 AK057000	-107041	+	NM_015078 BC064632 AK124500 AK310962	-126532	-	TSC_hg19_v1_chr3_+_182971608 AK091474 AX747008	-300865	+	AF441792 CU689348 DQ894788 EU176275 TSC_hg19_v1_chr3_-_183273495 AK097125 AK314473 BX648370 BC032348 NM_130446	981	-	BC142993 TSC_hg19_v1_chr3_+_183353410 AK026326 AY422472 BX648466 BX648812 NM_017644	80929	+	TSC_hg19_v1_chr3_+_183415597 AB033023 BC150273 NM_018023	143151	+	AK057000|LOC100505687|100505687|uncharacterized LOC100505687##NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AF441792|KLHL6|89857|kelch-like 6 (Drosophila)##DQ894788|KLHL6|89857|kelch-like 6 (Drosophila)##EU176275|KLHL6|89857|kelch-like 6 (Drosophila)##AK097125|KLHL6|89857|kelch-like 6 (Drosophila)##AK314473|KLHL6|89857|kelch-like 6 (Drosophila)##BX648370|KLHL6|89857|kelch-like 6 (Drosophila)##BC032348|KLHL6|89857|kelch-like 6 (Drosophila)##NM_130446|KLHL6|89857|kelch-like 6 (Drosophila)##BC142993|KLHL24|54800|kelch-like 24 (Drosophila)##AK026326|KLHL24|54800|kelch-like 24 (Drosophila)##AY422472|KLHL24|54800|kelch-like 24 (Drosophila)##BX648466|KLHL24|54800|kelch-like 24 (Drosophila)##BX648812|KLHL24|54800|kelch-like 24 (Drosophila)##NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)##AB033023|YEATS2|55689|YEATS domain containing 2##BC150273|YEATS2|55689|YEATS domain containing 2##NM_018023|YEATS2|55689|YEATS domain containing 2	0.0	
chr5	82373142	82373268	reg1030979.p2	3.632	+	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	-8	-	BC093982 BC112191 NM_001017971	-772040	+	TSC_hg19_v1_chr5_-_81574219 NM_001025	-798986	-	TSC_hg19_v1_chr5_-_82373255 NM_174909	57	-	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	178	+	NM_001126336 NM_001164097 NM_001164098 NM_004385 TSC_hg19_v1_chr5_+_82767562 U16306 U26555 X15998 AK307642 AB209491 BC050524 D32039	394412	+	BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001025|RPS23|6228|ribosomal protein S23##NM_174909|TMEM167A|153339|transmembrane protein 167A##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_001126336|VCAN|1462|versican##NM_001164097|VCAN|1462|versican##NM_001164098|VCAN|1462|versican##NM_004385|VCAN|1462|versican##U16306|VCAN|1462|versican##U26555|VCAN|1462|versican##X15998|VCAN|1462|versican##AK307642|VCAN|1462|versican##AB209491|VCAN|1462|versican##BC050524|VCAN|1462|versican##D32039|VCAN|1462|versican	0.0	
chr6	139282002	139282080	reg1037101.p2	3.632	+	NM_001077706 NM_001195037	-164794	+	AK092592 AX747618 NM_001242740	-187240	-	AY167571 NM_015439 BC108717 TSC_hg19_v1_chr6_+_139094905 AK300672 AL050197 AJ420568 BC000758 BC004464 BC080566 BC013019	-187251	+	BC021211 TSC_hg19_v1_chr6_-_139309122 AB209143	27036	-	TSC_hg19_v1_chr6_-_139309357 BC035286 AK312938	27307	-	TSC_hg19_v1_chr6_-_139309391 BC012764 NM_001128617 NM_031922	27369	-	NM_001077706|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##NM_001195037|ECT2L|345930|epithelial cell transforming sequence 2 oncogene-like##AK092592|LOC100507462|100507462|uncharacterized LOC100507462##NM_001242740|LOC100507462|100507462|uncharacterized LOC100507462##AY167571|CCDC28A|25901|coiled-coil domain containing 28A##NM_015439|CCDC28A|25901|coiled-coil domain containing 28A##BC108717|CCDC28A|25901|coiled-coil domain containing 28A##AK300672|CCDC28A|25901|coiled-coil domain containing 28A##AL050197|CCDC28A|25901|coiled-coil domain containing 28A##AJ420568|CCDC28A|25901|coiled-coil domain containing 28A##BC000758|CCDC28A|25901|coiled-coil domain containing 28A##BC004464|CCDC28A|25901|coiled-coil domain containing 28A##BC080566|CCDC28A|25901|coiled-coil domain containing 28A##BC013019|CCDC28A|25901|coiled-coil domain containing 28A##BC021211|REPS1|85021|RALBP1 associated Eps domain containing 1##AB209143|REPS1|85021|RALBP1 associated Eps domain containing 1##BC035286|REPS1|85021|RALBP1 associated Eps domain containing 1##AK312938|REPS1|85021|RALBP1 associated Eps domain containing 1##BC012764|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_001128617|REPS1|85021|RALBP1 associated Eps domain containing 1##NM_031922|REPS1|85021|RALBP1 associated Eps domain containing 1	0.0	
chr7	8008052	8008136	reg1026728.p2	3.632	+	BC009868 NM_002947	-249857	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-327721	+	BT007320 AB464142 TSC_hg19_v1_chr7_-_7680067 L07493 BC005264 AK311842	-328007	-	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	339	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	293622	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	293697	-	BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##BT007320|RPA3|6119|replication protein A3, 14kDa##L07493|RPA3|6119|replication protein A3, 14kDa##BC005264|RPA3|6119|replication protein A3, 14kDa##AK311842|RPA3|6119|replication protein A3, 14kDa##NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr8	55996165	55996255	reg1036666.p1	3.632	+	AF141021 NM_006269 DQ980612 DQ980613 DQ980614 AF143222 AF146592 DQ980615	-467558	+	AK025905 NM_022454 TSC_hg19_v1_chr8_+_55370494 BC030209 BC111770 BC111365	-625694	+	BC000891 NM_014175 TSC_hg19_v1_chr8_+_55047820 AF161494 AL136665 AK312832 AB528184 AM392964 CR533531	-948399	+	BC106028 AY534241 NM_052898	18804	+	AF286340 NM_024831	689535	+	AK308247 AK056932 NM_152417 BC020835 BC071636	689687	-	AF141021|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##NM_006269|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980612|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980613|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980614|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF143222|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AF146592|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##DQ980615|RP1|6101|retinitis pigmentosa 1 (autosomal dominant)##AK025905|SOX17|64321|SRY (sex determining region Y)-box 17##NM_022454|SOX17|64321|SRY (sex determining region Y)-box 17##BC030209|SOX17|64321|SRY (sex determining region Y)-box 17##BC111770|SOX17|64321|SRY (sex determining region Y)-box 17##BC111365|SOX17|64321|SRY (sex determining region Y)-box 17##BC000891|MRPL15|29088|mitochondrial ribosomal protein L15##NM_014175|MRPL15|29088|mitochondrial ribosomal protein L15##AF161494|MRPL15|29088|mitochondrial ribosomal protein L15##AL136665|MRPL15|29088|mitochondrial ribosomal protein L15##AK312832|MRPL15|29088|mitochondrial ribosomal protein L15##AM392964|MRPL15|29088|mitochondrial ribosomal protein L15##CR533531|MRPL15|29088|mitochondrial ribosomal protein L15##AY534241|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##NM_052898|XKR4|114786|XK, Kell blood group complex subunit-related family, member 4##AF286340|TGS1|96764|trimethylguanosine synthase 1##NM_024831|TGS1|96764|trimethylguanosine synthase 1##AK308247|TMEM68|137695|transmembrane protein 68##AK056932|TMEM68|137695|transmembrane protein 68##NM_152417|TMEM68|137695|transmembrane protein 68##BC020835|TMEM68|137695|transmembrane protein 68##BC071636|TMEM68|137695|transmembrane protein 68	0.032546	
chr1	101920845	101920940	reg1035513.p1	3.631	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-218322	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-218511	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-429459	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	541595	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	541898	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1575891	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.060608	
chr11	103490351	103490445	reg1031525.p1	3.631	+	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	-510199	+	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	-527475	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	-527657	-	NM_001001711 AF429971 AK093336 AX748060 BC022018 BC022017 BC021710 BC021172	416940	+	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	544396	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	544642	-	AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_001001711|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AF429971|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK093336|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022018|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022017|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021710|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021172|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D	0.411395	CTCF.p2:2:0.411
chr1	198799308	198799399	reg1032369.p1	3.631	+	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-191023	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-191128	+	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	-191180	+	TSC_hg19_v1_chr1_-_198906559 EF413001	107194	-	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	1197516	+	AK316513 TSC_hg19_v1_chr1_+_200011716	1212371	+	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	0.045537	
chr14	105527746	105527869	reg1035233.p2	3.631	+	TSC_hg19_v1_chr14_-_105487428 NM_017955 NM_145701	-40383	-	TSC_hg19_v1_chr14_-_105487413 AK303947	-40391	-	TSC_hg19_v1_chr14_-_105487410 AF322239 BC011736 BC025263	-40420	-	TSC_hg19_v1_chr14_-_105531756 AF083955 AX775937 NM_013345 EU543705	3941	-	TSC_hg19_v1_chr14_-_105531768 AB465599 AB465600 AK292142 AK303654 AX775935 AX775841	3966	-	Y14330 AF003521 AF020201 TSC_hg19_v1_chr14_-_105634835 BC032053	106984	-	NM_017955|CDCA4|55038|cell division cycle associated 4##NM_145701|CDCA4|55038|cell division cycle associated 4##AK303947|CDCA4|55038|cell division cycle associated 4##AF322239|CDCA4|55038|cell division cycle associated 4##BC011736|CDCA4|55038|cell division cycle associated 4##BC025263|CDCA4|55038|cell division cycle associated 4##AF083955|GPR132|29933|G protein-coupled receptor 132##NM_013345|GPR132|29933|G protein-coupled receptor 132##EU543705|GPR132|29933|G protein-coupled receptor 132##AB465599|GPR132|29933|G protein-coupled receptor 132##AB465600|GPR132|29933|G protein-coupled receptor 132##AK292142|GPR132|29933|G protein-coupled receptor 132##AK303654|GPR132|29933|G protein-coupled receptor 132##AX775935|GPR132|29933|G protein-coupled receptor 132##AX775841|GPR132|29933|G protein-coupled receptor 132##Y14330|JAG2|3714|jagged 2##AF003521|JAG2|3714|jagged 2##AF020201|JAG2|3714|jagged 2##BC032053|JAG2|3714|jagged 2	0.0	
chr1	87170102	87170272	reg1042490.p2	3.631	+	NM_012128 AK000072 AK314430 BC113687 BC113689 AF127035 AY358470 HQ258531 AK307785 AK307898 AK293766	-157346	+	NM_001285 TSC_hg19_v1_chr1_+_86934607 AK314375 AK291999 AK097057 AF127036	-235600	+	NM_006536 AF043977 AK296719 AK290348 AK307937 BC041096 AB026833 AF127980	-280338	+	TSC_hg19_v1_chr1_+_87170254 NM_001206651 NM_001206652 NM_001206653 NM_016009	64	+	TSC_hg19_v1_chr1_+_87170289 AK303710 AB007960 AK225864 AK001954	191	+	TSC_hg19_v1_chr1_+_87170510 AF350371	312	+	NM_012128|CLCA4|22802|chloride channel accessory 4##AK000072|CLCA4|22802|chloride channel accessory 4##AK314430|CLCA4|22802|chloride channel accessory 4##BC113687|CLCA4|22802|chloride channel accessory 4##BC113689|CLCA4|22802|chloride channel accessory 4##AF127035|CLCA4|22802|chloride channel accessory 4##AY358470|CLCA4|22802|chloride channel accessory 4##HQ258531|CLCA4|22802|chloride channel accessory 4##AK307785|CLCA4|22802|chloride channel accessory 4##AK307898|CLCA4|22802|chloride channel accessory 4##AK293766|CLCA4|22802|chloride channel accessory 4##NM_001285|CLCA1|1179|chloride channel accessory 1##AK314375|CLCA1|1179|chloride channel accessory 1##AK291999|CLCA1|1179|chloride channel accessory 1##AK097057|CLCA1|1179|chloride channel accessory 1##AF127036|CLCA1|1179|chloride channel accessory 1##NM_006536|CLCA2|9635|chloride channel accessory 2##AF043977|CLCA2|9635|chloride channel accessory 2##AK290348|CLCA2|9635|chloride channel accessory 2##AK307937|CLCA2|9635|chloride channel accessory 2##BC041096|CLCA2|9635|chloride channel accessory 2##AB026833|CLCA2|9635|chloride channel accessory 2##AF127980|CLCA2|9635|chloride channel accessory 2##NM_001206651|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_001206652|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_001206653|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_016009|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK303710|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AB007960|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK225864|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AK001954|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF350371|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1	0.08706	
chr19	6737141	6737309	reg1005108.p3	3.631	+	TSC_hg19_v1_chr19_-_6720662 BC063852 BC150179 BC150200 K02765 AK304071 BC150299 NM_000064 AK299114	-16569	-	AF064090 NM_003807 NM_172014	-66627	-	TSC_hg19_v1_chr19_-_6670094 CR541854 CR541871 AB528780 AF036581 AY028261 AY358812 BC018058 AK292037	-67101	-	AL365404 TSC_hg19_v1_chr19_-_6737583	350	-	TSC_hg19_v1_chr19_-_6737592 AK291968	370	-	TSC_hg19_v1_chr19_-_6737615 BC146909 AX775899 NM_001080452	393	-	BC063852|C3|718|complement component 3##BC150179|C3|718|complement component 3##BC150200|C3|718|complement component 3##K02765|C3|718|complement component 3##AK304071|C3|718|complement component 3##BC150299|C3|718|complement component 3##NM_000064|C3|718|complement component 3##AF064090|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_003807|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_172014|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541854|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541871|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF036581|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY028261|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY358812|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC018058|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AK292037|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AL365404|GPR108|56927|G protein-coupled receptor 108##AK291968|GPR108|56927|G protein-coupled receptor 108##BC146909|GPR108|56927|G protein-coupled receptor 108##AX775899|GPR108|56927|G protein-coupled receptor 108##NM_001080452|GPR108|56927|G protein-coupled receptor 108	0.0	
chr2	30555686	30555780	reg1028397.p1	3.631	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-101231	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-185857	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	-185900	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	114415	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	474560	-	AK122747 NM_001253827	796764	-	AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.0	
chr2	62561784	62561898	reg1029258.p1	3.631	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-138575	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-429012	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-446055	-	BC047439 AK091902 AX747245 NM_198276	171698	-	AK292545 NM_001142615	339144	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	371125	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr4	76006228	76006341	reg1036141.p1	3.631	+	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	-147912	+	BC011618 S55606 AB109441 NM_001729	-286501	-	BC009799 M30704 NM_001657	-525656	+	TSC_hg19_v1_chr4_-_76439504 AK309555 AK308754 AB528599 AF247041 CU689096 CU690404 GQ129342 GQ129343 GQ250944 GQ250945 GQ250946 JF691538 JF691539 AB209072 AF255666 AY888047 GU937000 AF305424	433232	-	TSC_hg19_v1_chr4_-_76439614 AK091501 AX747022 BC031057 BC047393 NM_001008925 NM_001009922 NM_015436	433330	-	NM_144721 TSC_hg19_v1_chr4_+_76439670 AK310575 AK056959 AK303658 AK308914 AK309187 AL833350 BX647579 AK313765	433407	+	NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##AK309555|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK308754|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF247041|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129342|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129343|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250944|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250945|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250946|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AB209072|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF255666|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AY888047|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GU937000|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF305424|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK091501|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC031057|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC047393|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001008925|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001009922|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_015436|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_144721|THAP6|152815|THAP domain containing 6##AK310575|THAP6|152815|THAP domain containing 6##AK056959|THAP6|152815|THAP domain containing 6##AK303658|THAP6|152815|THAP domain containing 6##AK308914|THAP6|152815|THAP domain containing 6##AK309187|THAP6|152815|THAP domain containing 6##AL833350|THAP6|152815|THAP domain containing 6##BX647579|THAP6|152815|THAP domain containing 6##AK313765|THAP6|152815|THAP domain containing 6	0.0	
chr9	135077306	135077399	reg1036099.p2	3.631	+	AB058760 NM_032536 TSC_hg19_v1_chr9_+_135037469	-39949	+	TSC_hg19_v1_chr9_+_135037083 AY358165	-40261	+	TSC_hg19_v1_chr9_-_134955246 BC119722 BC119723 AK298436 AK316345 BC002878 NM_004269	-122102	-	TSC_hg19_v1_chr9_-_135230312 AK125448	152878	-	TSC_hg19_v1_chr9_-_135230352 AK307608 BX537849	152996	-	TSC_hg19_v1_chr9_-_135230374 BX538166 NM_015046	153055	-	AB058760|NTNG2|84628|netrin G2##NM_032536|NTNG2|84628|netrin G2##AY358165|NTNG2|84628|netrin G2##BC119722|CRSP8P|441089|mediator complex subunit 27 pseudogene##BC119723|CRSP8P|441089|mediator complex subunit 27 pseudogene##AK298436|MED27|9442|mediator complex subunit 27##AK316345|MED27|9442|mediator complex subunit 27##BC002878|MED27|9442|mediator complex subunit 27##NM_004269|MED27|9442|mediator complex subunit 27##AK125448|SETX|23064|senataxin##AK307608|SETX|23064|senataxin##BX537849|SETX|23064|senataxin##BX538166|SETX|23064|senataxin##NM_015046|SETX|23064|senataxin	0.103649	
chr12	91502579	91502760	reg1002847.p1	3.630	+	NM_007035	-50539	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	-103890	-	U59111 TSC_hg19_v1_chr12_-_91398750	-103922	-	BC035997 AK223177 U18728 U21128 AK312682 TSC_hg19_v1_chr12_-_91505272 BC007038	2585	-	NM_002345	2872	-	AF138300 AF138301 AF138302 AF138303 AF138304 BT019800 CR407676 CR541946 NM_133504 NM_133505 NM_133506 NM_133507 AB463564 CU675109 DQ892556 DQ895769 BC005322	69676	-	NM_007035|KERA|11081|keratocan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan##U59111|EPYC|1833|epiphycan##BC035997|LUM|4060|lumican##AK223177|LUM|4060|lumican##U18728|LUM|4060|lumican##U21128|LUM|4060|lumican##AK312682|LUM|4060|lumican##BC007038|LUM|4060|lumican##NM_002345|LUM|4060|lumican##AF138300|DCN|1634|decorin##AF138301|DCN|1634|decorin##AF138302|DCN|1634|decorin##AF138303|DCN|1634|decorin##AF138304|DCN|1634|decorin##BT019800|DCN|1634|decorin##CR407676|DCN|1634|decorin##CR541946|DCN|1634|decorin##NM_133504|DCN|1634|decorin##NM_133505|DCN|1634|decorin##NM_133506|DCN|1634|decorin##NM_133507|DCN|1634|decorin##DQ892556|DCN|1634|decorin##DQ895769|DCN|1634|decorin##BC005322|DCN|1634|decorin	0.0	
chr16	75143073	75143153	reg1038230.p2	3.630	+	TSC_hg19_v1_chr16_+_75033257 AK294434 BC007235 AF378524 AL136903	-109853	+	TSC_hg19_v1_chr16_+_75032911 NM_032268	-110219	+	TSC_hg19_v1_chr16_-_75019011 NM_030581	-124088	-	CU690528 TSC_hg19_v1_chr16_-_75150650 BC040279	7524	-	AY092767 BC047902 NM_153486 NM_194436 TSC_hg19_v1_chr16_-_75150679	7566	-	AK296560 TSC_hg19_v1_chr16_+_75182389 AK291372 NM_153688 AK094761 AK308134 BC064604	39321	+	AK294434|ZNRF1|84937|zinc and ring finger 1##BC007235|ZNRF1|84937|zinc and ring finger 1##AF378524|ZNRF1|84937|zinc and ring finger 1##AL136903|ZNRF1|84937|zinc and ring finger 1##NM_032268|ZNRF1|84937|zinc and ring finger 1##NM_030581|WDR59|79726|WD repeat domain 59##BC040279|LDHD|197257|lactate dehydrogenase D##AY092767|LDHD|197257|lactate dehydrogenase D##BC047902|LDHD|197257|lactate dehydrogenase D##NM_153486|LDHD|197257|lactate dehydrogenase D##NM_194436|LDHD|197257|lactate dehydrogenase D##AK296560|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK291372|ZFP1|162239|zinc finger protein 1 homolog (mouse)##NM_153688|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK094761|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK308134|ZFP1|162239|zinc finger protein 1 homolog (mouse)##BC064604|ZFP1|162239|zinc finger protein 1 homolog (mouse)	0.0	
chr17	8813507	8813585	reg1036990.p1	3.630	+	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-42562	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-110994	-	BC146949 BC146966 BC171861 NM_001128076	-151670	-	AY725853 AF128881 NM_014308	2270	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	55435	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	111421	+	BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##BC146949|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC146966|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC171861|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##NM_001128076|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1	0.0	
chr20	14315132	14315236	reg1030606.p2	3.630	+	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-338848	+	AK131348 TSC_hg19_v1_chr20_+_13976161 NM_080676	-339078	+	BC035741 AK302170 NM_025229	-343926	-	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	3072	-	BC018687 NM_001033087	862319	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	2238829	-	BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK131348|MACROD2|140733|MACRO domain containing 2##NM_080676|MACROD2|140733|MACRO domain containing 2##BC035741|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AK302170|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##NM_025229|SEL1L2|80343|sel-1 suppressor of lin-12-like 2 (C. elegans)##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B	0.76722	CTCF.p2:-18:0.767
chr21	42803772	42803952	reg1029069.p1	3.630	+	NM_002462 TSC_hg19_v1_chr21_+_42798165 AK225885 AK315465 NM_001178046 M33882 BC052255	-5768	+	AK096355 NM_001144925	-11382	+	TSC_hg19_v1_chr21_+_42742025 AK298780	-61843	+	AK291813 TSC_hg19_v1_chr21_-_42880030 AK296860 NM_001135099 BC051839 AF270487 BC035623	76125	-	TSC_hg19_v1_chr21_-_42880078 AF329454 EU090249 HM245389 HM245390	76215	-	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	76221	-	NM_002462|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK225885|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK315465|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001178046|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##M33882|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##BC052255|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK096355|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001144925|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK298780|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK291813|TMPRSS2|7113|transmembrane protease, serine 2##AK296860|TMPRSS2|7113|transmembrane protease, serine 2##NM_001135099|TMPRSS2|7113|transmembrane protease, serine 2##BC051839|TMPRSS2|7113|transmembrane protease, serine 2##AF270487|TMPRSS2|7113|transmembrane protease, serine 2##BC035623|TMPRSS2|7113|transmembrane protease, serine 2##AF329454|TMPRSS2|7113|transmembrane protease, serine 2##EU090249|TMPRSS2|7113|transmembrane protease, serine 2##HM245389|TMPRSS2|7113|transmembrane protease, serine 2##HM245390|TMPRSS2|7113|transmembrane protease, serine 2##BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2	0.0	
chr6	113917826	113917909	reg1038815.p1	3.630	+	AK122906 NM_001013734	-1249336	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1341972	-	TSC_hg19_v1_chr6_-_112575770 AB210027 X91171 NM_001105206 NM_001105207 NM_001105208 NM_001105209 NM_002290	-1342062	-	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	260867	+	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	374405	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	374469	-	AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##AB210027|LAMA4|3910|laminin, alpha 4##X91171|LAMA4|3910|laminin, alpha 4##NM_001105206|LAMA4|3910|laminin, alpha 4##NM_001105207|LAMA4|3910|laminin, alpha 4##NM_001105208|LAMA4|3910|laminin, alpha 4##NM_001105209|LAMA4|3910|laminin, alpha 4##NM_002290|LAMA4|3910|laminin, alpha 4##AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2	0.0	
chr6	148881154	148881278	reg1010787.p2	3.630	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-217025	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-217226	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	-217453	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	186993	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	757887	+	AK315038 NM_015093 AK307650	758225	+	AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##NM_005715|UST|10090|uronyl-2-sulfotransferase##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2	0.0	
chr6	157342750	157342826	reg1031519.p2	3.630	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-242913	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-243504	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-243563	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	401796	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	402429	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	459751	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	0.261454	CTCF.p2:56:0.247
chr9	29212295	29212388	reg1034623.p1	3.630	+	AK056372 NM_152570	-493039	-	AK057806 JN681271 NM_145005	-1638500	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-1638870	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	3172249	+	TSC_hg19_v1_chr9_+_32384622 AK057904	3172286	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	3172308	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	0.018018	
chr10	87863663	87863759	reg1032400.p1	3.629	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-1679016	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-1732093	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-1775317	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	262552	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	417783	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	417819	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.011194	
chr1	169092314	169092483	reg1040206.p1	3.629	+	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	-16429	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	-393969	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-546606	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	244694	-	NM_003666 AF288161 U79751 AK223533	244825	+	TSC_hg19_v1_chr1_+_169337450 AK307151 AK291725 BC020716	245051	+	AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_003666|BLZF1|8548|basic leucine zipper nuclear factor 1##AF288161|BLZF1|8548|basic leucine zipper nuclear factor 1##U79751|BLZF1|8548|basic leucine zipper nuclear factor 1##AK223533|BLZF1|8548|basic leucine zipper nuclear factor 1##AK307151|BLZF1|8548|basic leucine zipper nuclear factor 1##AK291725|BLZF1|8548|basic leucine zipper nuclear factor 1##BC020716|BLZF1|8548|basic leucine zipper nuclear factor 1	0.0	
chr12	1663875	1664049	reg1028443.p2	3.629	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-563510	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-605136	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-646880	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	39389	-	AY009399 NM_030775	62259	+	BC001749 NM_032642	74449	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.0	
chr13	43690549	43690628	reg1036151.p1	3.629	+	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	-92886	+	AF126743 AY248898 NM_013238	-93239	+	CU692822 DQ892268 DQ895469 TSC_hg19_v1_chr13_-_43566378 AL831953 AF396928 BC023660 AK313877 AK292461 NM_001002264 NM_033255	-124218	-	BC024178 NM_001127615	513022	-	TSC_hg19_v1_chr13_-_44361107 BC068521 NM_001242863 NM_017993	670495	-	NM_001128303	762831	+	BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AF126743|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY248898|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_013238|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##DQ892268|EPSTI1|94240|epithelial stromal interaction 1 (breast)##DQ895469|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AL831953|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AF396928|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC023660|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK313877|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK292461|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_001002264|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_033255|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC024178|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001127615|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC068521|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001242863|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_017993|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1	0.0	
chr14	105864861	105864945	reg1035721.p2	3.629	+	TSC_hg19_v1_chr14_+_105864874 NM_001195082	-18	+	AK295579 AK294899 NM_001242786 NM_001242787	-83034	-	TSC_hg19_v1_chr14_+_105781197 BC050351 AB385359	-83641	+	TSC_hg19_v1_chr14_+_105865463 AK124813	629	+	AK123017 TSC_hg19_v1_chr14_-_105886160	21232	-	TSC_hg19_v1_chr14_+_105886196 BC142941 NM_001203258 NM_004689	21279	+	NM_001195082|TEX22|647310|testis expressed 22##AK295579|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##AK294899|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_001242786|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_001242787|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##BC050351|PACS2|23241|phosphofurin acidic cluster sorting protein 2##AK123017|LOC100507437|100507437|uncharacterized LOC100507437##BC142941|MTA1|9112|metastasis associated 1##NM_001203258|MTA1|9112|metastasis associated 1##NM_004689|MTA1|9112|metastasis associated 1	0.063359	
chr15	74505065	74505245	reg1028324.p2	3.629	+	AK299191 NM_001199040	-3110	-	AF352729 AY358748 BC015881 AK056125 NM_001142617 NM_001142619 NM_001142620 TSC_hg19_v1_chr15_-_74501378	-3812	-	AK302932 NM_001199041	-4761	-	NM_025055 AK057417	23549	+	AK290709 AK310852 AK026821 NM_182791 BC025689 CU693014	105750	+	AK292301 AK056794 NM_001099773 TSC_hg19_v1_chr15_-_74658572	153380	-	AK299191|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001199040|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AF352729|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AY358748|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##BC015881|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AK056125|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142617|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142619|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001142620|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##AK302932|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_001199041|STRA6|64220|stimulated by retinoic acid gene 6 homolog (mouse)##NM_025055|CCDC33|80125|coiled-coil domain containing 33##AK057417|CCDC33|80125|coiled-coil domain containing 33##AK290709|CCDC33|80125|coiled-coil domain containing 33##AK310852|CCDC33|80125|coiled-coil domain containing 33##AK026821|CCDC33|80125|coiled-coil domain containing 33##NM_182791|CCDC33|80125|coiled-coil domain containing 33##BC025689|CCDC33|80125|coiled-coil domain containing 33##AK292301|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##AK056794|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1##NM_001099773|CYP11A1|1583|cytochrome P450, family 11, subfamily A, polypeptide 1	0.083503	
chr21	43481971	43482152	reg1022593.p2	3.629	+	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	-51590	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	-107978	-	BC062323 AL833323 NM_199050	-135272	-	AB051810 AB051811 NM_001199527 NM_001199528	1006	+	AB096965 AY771619 AY771620 NM_001004416 NM_173568	9364	+	AF323660 NM_207627 AF323661 NM_207628	137798	+	AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1##AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	0.279927	CTCF.p2:-94:0.280
chr5	140797610	140797729	reg1009760.p2	3.629	+	TSC_hg19_v1_chr5_+_140797279 AF152336 AF152523	-321	+	TSC_hg19_v1_chr5_+_140797246 NM_018927	-418	+	TSC_hg19_v1_chr5_+_140797217 NM_032101	-453	+	NM_018914 NM_032091 NM_032092 TSC_hg19_v1_chr5_+_140800602	2900	+	TSC_hg19_v1_chr5_+_140800620 BC136781 BC171774 AF152320 AF152504 AF152505	3034	+	AY358946 TSC_hg19_v1_chr5_+_140810073	12351	+	AF152336|PCDHGB7|56099|protocadherin gamma subfamily B, 7##AF152523|PCDHGB7|56099|protocadherin gamma subfamily B, 7##NM_018927|PCDHGB7|56099|protocadherin gamma subfamily B, 7##NM_032101|PCDHGB7|56099|protocadherin gamma subfamily B, 7##NM_018914|PCDHGA11|56105|protocadherin gamma subfamily A, 11##NM_032091|PCDHGA11|56105|protocadherin gamma subfamily A, 11##NM_032092|PCDHGA11|56105|protocadherin gamma subfamily A, 11##BC136781|PCDHGA11|56105|protocadherin gamma subfamily A, 11##BC171774|PCDHGA11|56105|protocadherin gamma subfamily A, 11##AF152320|PCDHGA11|56105|protocadherin gamma subfamily A, 11##AF152504|PCDHGA11|56105|protocadherin gamma subfamily A, 11##AF152505|PCDHGA11|56105|protocadherin gamma subfamily A, 11##AY358946|PCDHGA12|26025|protocadherin gamma subfamily A, 12	0.0	
chr5	55566051	55566165	reg1002311.p2	3.629	+	AK123389 NM_024669	-36923	-	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-275345	-	NM_001242636 NM_001242639	-416959	+	NM_005921	544791	+	TSC_hg19_v1_chr5_+_56111375 AK307828	545256	+	TSC_hg19_v1_chr5_+_56111395 AF042838	545310	+	AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr6	42427760	42427863	reg1032951.p1	3.629	+	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	-7988	-	TSC_hg19_v1_chr6_-_42185603 NM_018141	-242194	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-242211	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	103939	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	103966	+	TSC_hg19_v1_chr6_+_42531956 AY061884 CU687884	104193	+	AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##AY061884|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.054664	
chr6	90121990	90122131	reg1031232.p1	3.629	+	TSC_hg19_v1_chr6_-_90121945 AK289799	-132	-	BC003088 AF272036 AL137502 TSC_hg19_v1_chr6_-_90121800	-320	-	TSC_hg19_v1_chr6_-_90062622 NM_016021	-59273	-	TSC_hg19_v1_chr6_-_90121986 NM_021244	64	-	TSC_hg19_v1_chr6_+_90142897 NM_001242809 NM_001242813 NM_014942 AK307792 BC042173 AB023174	20875	+	NM_001242811 AK295731	150017	+	AK289799|RRAGD|58528|Ras-related GTP binding D##BC003088|RRAGD|58528|Ras-related GTP binding D##AF272036|RRAGD|58528|Ras-related GTP binding D##AL137502|RRAGD|58528|Ras-related GTP binding D##NM_016021|UBE2J1|51465|ubiquitin-conjugating enzyme E2, J1, U##NM_021244|RRAGD|58528|Ras-related GTP binding D##NM_001242809|ANKRD6|22881|ankyrin repeat domain 6##NM_001242813|ANKRD6|22881|ankyrin repeat domain 6##NM_014942|ANKRD6|22881|ankyrin repeat domain 6##AK307792|ANKRD6|22881|ankyrin repeat domain 6##BC042173|ANKRD6|22881|ankyrin repeat domain 6##AB023174|ANKRD6|22881|ankyrin repeat domain 6##NM_001242811|ANKRD6|22881|ankyrin repeat domain 6##AK295731|ANKRD6|22881|ankyrin repeat domain 6	0.0	
chr7	100034261	100034387	reg1038384.p2	3.629	+	TSC_hg19_v1_chr7_-_100034098 BC026269 NM_145030	-247	-	TSC_hg19_v1_chr7_+_100027484 AK291366 BC000556 BC018935	-6795	+	BC016396 NM_019606 TSC_hg19_v1_chr7_+_100027373	-6999	+	BC031966 NM_001004323	27569	-	BC001966 BC031622 AK314824 TSC_hg19_v1_chr7_-_100076802 BC002972 BC010406 AK296580 AK297702 AK310800 BC001486 NM_030935	42503	-	AK124773 NM_173564	47225	+	BC026269|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##NM_145030|PPP1R35|221908|protein phosphatase 1, regulatory subunit 35##AK291366|MEPCE|56257|methylphosphate capping enzyme##BC000556|MEPCE|56257|methylphosphate capping enzyme##BC018935|MEPCE|56257|methylphosphate capping enzyme##BC016396|MEPCE|56257|methylphosphate capping enzyme##NM_019606|MEPCE|56257|methylphosphate capping enzyme##BC031966|C7orf61|402573|chromosome 7 open reading frame 61##NM_001004323|C7orf61|402573|chromosome 7 open reading frame 61##BC001966|TSC22D4|81628|TSC22 domain family, member 4##BC031622|TSC22D4|81628|TSC22 domain family, member 4##AK314824|TSC22D4|81628|TSC22 domain family, member 4##BC002972|TSC22D4|81628|TSC22 domain family, member 4##BC010406|TSC22D4|81628|TSC22 domain family, member 4##AK296580|TSC22D4|81628|TSC22 domain family, member 4##AK297702|TSC22D4|81628|TSC22 domain family, member 4##BC001486|TSC22D4|81628|TSC22 domain family, member 4##NM_030935|TSC22D4|81628|TSC22 domain family, member 4##AK124773|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1##NM_173564|NYAP1|222950|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1	0.0	
chr7	105318613	105318694	reg1035732.p2	3.629	+	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	-96718	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	-146007	+	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	-155992	-	AK300338 NM_138495	955	-	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	198332	-	TSC_hg19_v1_chr7_+_105517250 AK125261	198611	+	BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK300338|ATXN7L1|222255|ataxin 7-like 1##NM_138495|ATXN7L1|222255|ataxin 7-like 1##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##AK125261|CDHR3|222256|cadherin-related family member 3	0.0	
chr7	125619429	125619549	reg1042523.p1	3.629	+	NM_001042594 NM_015450	-1049453	-	BC130600 BC130604 NM_001024603	-1188687	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	-1213693	-	NM_000845	1264079	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	1272876	-	TSC_hg19_v1_chr7_-_126893165 AK290197	1273663	-	NM_001042594|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_015450|POT1|25913|protection of telomeres 1 homolog (S. pombe)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##AK290197|GRM8|2918|glutamate receptor, metabotropic 8	0.041402	
chr7	140599747	140599857	reg1039023.p2	3.629	+	TSC_hg19_v1_chr7_+_140396507 AF067166 NM_004546 AF050639 BC063026 BC001168 CR542121	-203299	+	TSC_hg19_v1_chr7_+_140372910 AF131745 AY302592 NM_052853 BC014107	-226864	+	AB033103 TSC_hg19_v1_chr7_-_140340614	-259192	-	TSC_hg19_v1_chr7_-_140624512 AB529216 AK314346 BC101757 BC112079 M95712 NM_004333	24705	-	AF151897 AK024776 NM_016071	114665	-	TSC_hg19_v1_chr7_-_140714748 AF078858 BC105793	114948	-	AF067166|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##NM_004546|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF050639|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC063026|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC001168|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##CR542121|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF131745|ADCK2|90956|aarF domain containing kinase 2##AY302592|ADCK2|90956|aarF domain containing kinase 2##NM_052853|ADCK2|90956|aarF domain containing kinase 2##BC014107|ADCK2|90956|aarF domain containing kinase 2##AB033103|DENND2A|27147|DENN/MADD domain containing 2A##AK314346|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC101757|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC112079|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##M95712|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##NM_004333|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##AF151897|MRPS33|51650|mitochondrial ribosomal protein S33##AK024776|MRPS33|51650|mitochondrial ribosomal protein S33##NM_016071|MRPS33|51650|mitochondrial ribosomal protein S33##AF078858|MRPS33|51650|mitochondrial ribosomal protein S33##BC105793|MRPS33|51650|mitochondrial ribosomal protein S33	0.041903	
chr8	134520365	134520514	reg1039464.p2	3.629	+	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-210942	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-317109	+	NM_001045556 NM_001045557	-405130	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	63658	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1188355	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1204640	-	AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.969811	CTCF.p2:-3:0.970
chrX	48814141	48814222	reg1035312.p1	3.629	+	U77735 BC018111 AK312745 TSC_hg19_v1_chrX_-_48776302 AK290931 NM_006875	-37834	-	D84454 NM_001042498	-44947	-	CR450287 D88146 NM_005660 AK225508 AK290284 AK293415 AK293419 AK298484 AK299748 TSC_hg19_v1_chrX_-_48768926 BC035747 NM_001032289 AK292816	-45250	-	TSC_hg19_v1_chrX_-_48814831 BC028225	624	-	TSC_hg19_v1_chrX_-_48814870 BC009917 NM_001136157 NM_001136158 NM_017602	693	-	TSC_hg19_v1_chrX_-_48815168 BC098440	950	-	U77735|PIM2|11040|pim-2 oncogene##BC018111|PIM2|11040|pim-2 oncogene##AK312745|PIM2|11040|pim-2 oncogene##AK290931|PIM2|11040|pim-2 oncogene##NM_006875|PIM2|11040|pim-2 oncogene##D84454|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001042498|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##CR450287|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##D88146|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_005660|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK225508|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK290284|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293415|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293419|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK298484|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK299748|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC035747|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001032289|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK292816|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC028225|OTUD5|55593|OTU domain containing 5##BC009917|OTUD5|55593|OTU domain containing 5##NM_001136157|OTUD5|55593|OTU domain containing 5##NM_001136158|OTUD5|55593|OTU domain containing 5##NM_017602|OTUD5|55593|OTU domain containing 5##BC098440|OTUD5|55593|OTU domain containing 5	0.0	
chr14	69281413	69281540	reg1036960.p1	3.628	+	NM_001244701 AB528867	-18492	-	NM_001244698 NM_004926	-20846	-	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	-21756	-	TSC_hg19_v1_chr14_-_69354901 BX641076	73463	-	BX248020 AK299362 TSC_hg19_v1_chr14_-_69444987	163510	-	BT007207 AB590251 DQ890778 DQ895768 EU716325 FJ410030 TSC_hg19_v1_chr14_-_69445830 M95178 BC015766	164354	-	NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BX641076|ACTN1|87|actinin, alpha 1##BX248020|ACTN1|87|actinin, alpha 1##AK299362|ACTN1|87|actinin, alpha 1##BT007207|ACTN1|87|actinin, alpha 1##DQ890778|ACTN1|87|actinin, alpha 1##DQ895768|ACTN1|87|actinin, alpha 1##EU716325|ACTN1|87|actinin, alpha 1##FJ410030|ACTN1|87|actinin, alpha 1##M95178|ACTN1|87|actinin, alpha 1##BC015766|ACTN1|87|actinin, alpha 1	0.0	
chr14	73957466	73957629	reg1029650.p1	3.628	+	TSC_hg19_v1_chr14_-_73925284 BC068476 NM_001005743 NM_001005744 NM_001005745 NM_003744	-32256	-	TSC_hg19_v1_chr14_-_73925274 BX248781	-32280	-	BX248775 TSC_hg19_v1_chr14_-_73925232 BX647137 AF171938 AF171939 AF171940 AF171941 BX248073 AF015040 AK315130 BC020788	-32315	-	TSC_hg19_v1_chr14_+_73957638 NM_024644	78	+	TSC_hg19_v1_chr14_+_73957669 AK299994 AK025455 BC011350	116	+	TSC_hg19_v1_chr14_+_73957674 AY390535	126	+	BC068476|NUMB|8650|numb homolog (Drosophila)##NM_001005743|NUMB|8650|numb homolog (Drosophila)##NM_001005744|NUMB|8650|numb homolog (Drosophila)##NM_001005745|NUMB|8650|numb homolog (Drosophila)##NM_003744|NUMB|8650|numb homolog (Drosophila)##BX248781|NUMB|8650|numb homolog (Drosophila)##BX248775|NUMB|8650|numb homolog (Drosophila)##BX647137|NUMB|8650|numb homolog (Drosophila)##AF171938|NUMB|8650|numb homolog (Drosophila)##AF171939|NUMB|8650|numb homolog (Drosophila)##AF171940|NUMB|8650|numb homolog (Drosophila)##AF171941|NUMB|8650|numb homolog (Drosophila)##BX248073|NUMB|8650|numb homolog (Drosophila)##AF015040|NUMB|8650|numb homolog (Drosophila)##AK315130|NUMB|8650|numb homolog (Drosophila)##BC020788|NUMB|8650|numb homolog (Drosophila)##NM_024644|C14orf169|79697|chromosome 14 open reading frame 169##AK299994|C14orf169|79697|chromosome 14 open reading frame 169##AK025455|C14orf169|79697|chromosome 14 open reading frame 169##BC011350|C14orf169|79697|chromosome 14 open reading frame 169##AY390535|C14orf169|79697|chromosome 14 open reading frame 169	0.0	
chr16	11438983	11439161	reg1029991.p1	3.628	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-63930	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	-68752	-	NM_021247	-71621	-	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	222	+	TSC_hg19_v1_chr16_+_11439315 BC013040	246	+	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	241115	-	BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2##NM_021247|PRM3|58531|protamine 3##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor	0.0	
chr17	61959704	61959788	reg1038393.p1	3.628	+	AB451332 AB451477 AF006061 AF006060 M38451 BC020760 J03756 NM_002059 NM_022556 NM_022557 NM_022558 AK312194	-555	-	V00573 BC119748 BC022044 BC035965 NM_020991 NM_022644 NM_022645	-8704	-	TSC_hg19_v1_chr17_-_61920365 BC136322 NM_001098426 U66618	-39396	-	BT006926 J00118 BC002717 AK291587 BC005921 BC057768 BC062775 BC020756 NM_001317 M35419	14205	-	BC119747 BC029365 NM_001318 NM_022579 NM_022580 NM_022581 AX772828	28911	-	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	36420	-	AB451332|GH2|2689|growth hormone 2##AB451477|GH2|2689|growth hormone 2##AF006061|GH2|2689|growth hormone 2##AF006060|GH2|2689|growth hormone 2##M38451|GH2|2689|growth hormone 2##BC020760|GH2|2689|growth hormone 2##J03756|GH2|2689|growth hormone 2##NM_002059|GH2|2689|growth hormone 2##NM_022556|GH2|2689|growth hormone 2##NM_022557|GH2|2689|growth hormone 2##NM_022558|GH2|2689|growth hormone 2##AK312194|GH2|2689|growth hormone 2##V00573|CSH2|1443|chorionic somatomammotropin hormone 2##BC119748|CSH2|1443|chorionic somatomammotropin hormone 2##BC022044|CSH2|1443|chorionic somatomammotropin hormone 2##BC035965|CSH2|1443|chorionic somatomammotropin hormone 2##NM_020991|CSH2|1443|chorionic somatomammotropin hormone 2##NM_022644|CSH2|1443|chorionic somatomammotropin hormone 2##NM_022645|CSH2|1443|chorionic somatomammotropin hormone 2##BC136322|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##NM_001098426|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##U66618|SMARCD2|6603|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2##BT006926|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##J00118|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC002717|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##AK291587|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC005921|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC057768|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC062775|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC020756|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##NM_001317|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC119747|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BC029365|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_001318|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022579|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022580|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022581|CSHL1|1444|chorionic somatomammotropin hormone-like 1##M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1	0.990949	CTCF.p2:38:0.991
chr1	78291084	78291176	reg1030236.p1	3.628	+	TSC_hg19_v1_chr1_+_78245342 BX537792 NM_198549 BC130387 BC144167 AK296411 AK092412 AX747532	-45796	+	TSC_hg19_v1_chr1_-_78225538 BC016663 AK308402 AB029020 AF383172 AF383173 AK022864 NM_015017 NM_201624 NM_201626	-65678	-	TSC_hg19_v1_chr1_-_78149099 BC035079 BC035079	-141932	-	NM_001172309 NM_144573 AK298565 AK300728 AK307487 CR936630 BX648546 DQ464902 AF176780 AY211912 TSC_hg19_v1_chr1_+_78354351 BC055084	63182	+	DQ895919 EU176379 U05040 TSC_hg19_v1_chr1_-_78444757 BC010083 BC017247 AK300032 AK301581 AK303568	153596	-	TSC_hg19_v1_chr1_-_78444772 NM_003902	153645	-	BX537792|FAM73A|374986|family with sequence similarity 73, member A##NM_198549|FAM73A|374986|family with sequence similarity 73, member A##BC130387|FAM73A|374986|family with sequence similarity 73, member A##BC144167|FAM73A|374986|family with sequence similarity 73, member A##AK296411|FAM73A|374986|family with sequence similarity 73, member A##AK092412|FAM73A|374986|family with sequence similarity 73, member A##BC016663|USP33|23032|ubiquitin specific peptidase 33##AK308402|USP33|23032|ubiquitin specific peptidase 33##AB029020|USP33|23032|ubiquitin specific peptidase 33##AF383172|USP33|23032|ubiquitin specific peptidase 33##AF383173|USP33|23032|ubiquitin specific peptidase 33##AK022864|USP33|23032|ubiquitin specific peptidase 33##NM_015017|USP33|23032|ubiquitin specific peptidase 33##NM_201624|USP33|23032|ubiquitin specific peptidase 33##NM_201626|USP33|23032|ubiquitin specific peptidase 33##BC035079|ZZZ3|26009|zinc finger, ZZ-type containing 3##BC035079|ZZZ3|26009|zinc finger, ZZ-type containing 3##NM_001172309|NEXN|91624|nexilin (F actin binding protein)##NM_144573|NEXN|91624|nexilin (F actin binding protein)##AK298565|NEXN|91624|nexilin (F actin binding protein)##AK300728|NEXN|91624|nexilin (F actin binding protein)##AK307487|NEXN|91624|nexilin (F actin binding protein)##CR936630|NEXN|91624|nexilin (F actin binding protein)##BX648546|NEXN|91624|nexilin (F actin binding protein)##DQ464902|NEXN|91624|nexilin (F actin binding protein)##AF176780|NEXN|91624|nexilin (F actin binding protein)##AY211912|NEXN|91624|nexilin (F actin binding protein)##BC055084|NEXN|91624|nexilin (F actin binding protein)##DQ895919|FUBP1|8880|far upstream element (FUSE) binding protein 1##EU176379|FUBP1|8880|far upstream element (FUSE) binding protein 1##U05040|FUBP1|8880|far upstream element (FUSE) binding protein 1##BC010083|FUBP1|8880|far upstream element (FUSE) binding protein 1##BC017247|FUBP1|8880|far upstream element (FUSE) binding protein 1##AK300032|FUBP1|8880|far upstream element (FUSE) binding protein 1##AK301581|FUBP1|8880|far upstream element (FUSE) binding protein 1##AK303568|FUBP1|8880|far upstream element (FUSE) binding protein 1##NM_003902|FUBP1|8880|far upstream element (FUSE) binding protein 1	0.948155	CTCF.p2:8:0.948
chr18	12744405	12744586	reg1004520.p2	3.628	+	TSC_hg19_v1_chr18_+_12703040 NM_020232 AK225882 AF168712 AK057005 BC013356 CU680576	-41459	+	TSC_hg19_v1_chr18_-_12702776 AK298223	-41731	-	TSC_hg19_v1_chr18_-_12702689 AK022604 BC033026 AL833727 BC026307 NM_024899 AK303117	-41820	-	CU678897 AB590517 BC008244 TSC_hg19_v1_chr18_-_12884237 M25393 AK225706 AK290649 AK292570 BC016727 NM_001207013 NM_002828 NM_080422 NM_080423	139741	-	TSC_hg19_v1_chr18_+_12947986 NM_001013437 NM_031216	203490	+	TSC_hg19_v1_chr18_+_12948009 AK314403	203511	+	NM_020232|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK225882|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AF168712|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK057005|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##BC013356|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK298223|CEP76|79959|centrosomal protein 76kDa##AK022604|CEP76|79959|centrosomal protein 76kDa##BC033026|CEP76|79959|centrosomal protein 76kDa##AL833727|CEP76|79959|centrosomal protein 76kDa##BC026307|CEP76|79959|centrosomal protein 76kDa##NM_024899|CEP76|79959|centrosomal protein 76kDa##AK303117|CEP76|79959|centrosomal protein 76kDa##BC008244|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##M25393|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK225706|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK290649|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK292570|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##BC016727|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_001207013|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_002828|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_080422|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_080423|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_001013437|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_031216|SEH1L|81929|SEH1-like (S. cerevisiae)##AK314403|SEH1L|81929|SEH1-like (S. cerevisiae)	0.0	
chr18	63420905	63421031	reg1046157.p1	3.628	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-2766	+	TSC_hg19_v1_chr18_+_63417845 BC036786	-3102	+	AJ007611 NM_033646	-3481	+	AJ007607 NM_021153 AK304000 AK315257 BC015877	850343	-	AK021849 TSC_hg19_v1_chr18_-_65182656	1761615	-	TSC_hg19_v1_chr18_-_65183956 NM_032160	1762978	-	AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AK021849|DSEL|92126|dermatan sulfate epimerase-like##NM_032160|DSEL|92126|dermatan sulfate epimerase-like	0.0	
chr20	56008078	56008178	reg1032681.p2	3.628	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-41671	+	NM_001190472	-73251	-	AK292247 AY349350 NM_001015885	-81527	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	92073	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	128029	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	187410	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.0	
chr2	172204187	172204329	reg1018083.p2	3.628	+	AK090779 NM_001136554	-116435	-	TSC_hg19_v1_chr2_-_172017431 AK091975 NM_012290	-186759	-	TSC_hg19_v1_chr2_-_172017240 DQ890904 DQ894057 BC032657 D50927 AK292508 AF162666 AB004885	-187162	-	TSC_hg19_v1_chr2_-_172290501 AK124092 BC025250 AK024046	86268	-	TSC_hg19_v1_chr2_+_172290743 AK307877 NM_001164821 NM_025000	86504	+	TSC_hg19_v1_chr2_+_172290824 CR933646	86553	+	AK090779|TLK1|9874|tousled-like kinase 1##NM_001136554|TLK1|9874|tousled-like kinase 1##AK091975|TLK1|9874|tousled-like kinase 1##NM_012290|TLK1|9874|tousled-like kinase 1##DQ890904|TLK1|9874|tousled-like kinase 1##DQ894057|TLK1|9874|tousled-like kinase 1##BC032657|TLK1|9874|tousled-like kinase 1##D50927|TLK1|9874|tousled-like kinase 1##AK292508|TLK1|9874|tousled-like kinase 1##AF162666|TLK1|9874|tousled-like kinase 1##AB004885|TLK1|9874|tousled-like kinase 1##AK124092|METTL8|79828|methyltransferase like 8##BC025250|METTL8|79828|methyltransferase like 8##AK024046|METTL8|79828|methyltransferase like 8##AK307877|DCAF17|80067|DDB1 and CUL4 associated factor 17##NM_001164821|DCAF17|80067|DDB1 and CUL4 associated factor 17##NM_025000|DCAF17|80067|DDB1 and CUL4 associated factor 17##CR933646|DCAF17|80067|DDB1 and CUL4 associated factor 17	0.0	
chr5	137468813	137468919	reg1011233.p1	3.628	+	BC144497 AY009402 BC144001 AB057725 NM_058244 AB590697	-49187	+	TSC_hg19_v1_chr5_-_137368794 NM_001101800 NM_001101801 NM_016603	-100076	-	TSC_hg19_v1_chr5_-_137368776 AK314224	-100090	-	U90450 AK312181 AF067724 BC026182 NM_003551	6237	-	BC008039 BC008076 AB384833 AB209079 TSC_hg19_v1_chr5_-_137514319 AK310380 AK289951 AK293621 AK297756 AK299694 AK312333 AK225928 AL136823 NM_001164326 NM_006696 NM_139199	45467	-	NM_005733	45550	+	BC144497|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AY009402|WNT8A|7478|wingless-type MMTV integration site family, member 8A##BC144001|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AB057725|WNT8A|7478|wingless-type MMTV integration site family, member 8A##NM_058244|WNT8A|7478|wingless-type MMTV integration site family, member 8A##NM_001101800|FAM13B|51306|family with sequence similarity 13, member B##NM_001101801|FAM13B|51306|family with sequence similarity 13, member B##NM_016603|FAM13B|51306|family with sequence similarity 13, member B##AK314224|FAM13B|51306|family with sequence similarity 13, member B##U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC008039|BRD8|10902|bromodomain containing 8##BC008076|BRD8|10902|bromodomain containing 8##AB209079|BRD8|10902|bromodomain containing 8##AK310380|BRD8|10902|bromodomain containing 8##AK289951|BRD8|10902|bromodomain containing 8##AK293621|BRD8|10902|bromodomain containing 8##AK297756|BRD8|10902|bromodomain containing 8##AK312333|BRD8|10902|bromodomain containing 8##AK225928|BRD8|10902|bromodomain containing 8##AL136823|BRD8|10902|bromodomain containing 8##NM_001164326|BRD8|10902|bromodomain containing 8##NM_006696|BRD8|10902|bromodomain containing 8##NM_139199|BRD8|10902|bromodomain containing 8##NM_005733|KIF20A|10112|kinesin family member 20A	0.0	
chr7_gl000195_random	131772	131858	reg1036494.p2	3.628	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr8	21867721	21867877	reg1041461.p1	3.628	+	TSC_hg19_v1_chr8_+_21777257 AK291472 AB018288 AF064729 CU689010	-90551	+	TSC_hg19_v1_chr8_+_21777194 NM_015024 BC030785	-90610	+	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	-96634	-	TSC_hg19_v1_chr8_+_21881644 AK094267	13836	+	AY262114 NM_182795 BC068078	14558	+	BC105131 BC113489 BC143789 AY358869 AB009249 BC069475 NM_003867 HQ258756	32615	+	AK291472|XPO7|23039|exportin 7##AB018288|XPO7|23039|exportin 7##AF064729|XPO7|23039|exportin 7##NM_015024|XPO7|23039|exportin 7##BC030785|XPO7|23039|exportin 7##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa##AK094267|NPM2|10361|nucleophosmin/nucleoplasmin 2##AY262114|NPM2|10361|nucleophosmin/nucleoplasmin 2##NM_182795|NPM2|10361|nucleophosmin/nucleoplasmin 2##BC068078|NPM2|10361|nucleophosmin/nucleoplasmin 2##BC105131|FGF17|8822|fibroblast growth factor 17##BC113489|FGF17|8822|fibroblast growth factor 17##BC143789|FGF17|8822|fibroblast growth factor 17##AY358869|FGF17|8822|fibroblast growth factor 17##AB009249|FGF17|8822|fibroblast growth factor 17##BC069475|FGF17|8822|fibroblast growth factor 17##NM_003867|FGF17|8822|fibroblast growth factor 17##HQ258756|FGF17|8822|fibroblast growth factor 17	0.705221	CTCF.p2:-15:0.705
chr8	71453654	71453720	reg1042847.p2	3.628	+	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	-137661	-	BC092442 TSC_hg19_v1_chr8_-_71315599	-138140	-	TSC_hg19_v1_chr8_-_70983549 AF319458 AK022595 NM_024504	-470132	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	66835	-	TSC_hg19_v1_chr8_-_71520654 AK303411 NM_014294	66969	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	127697	-	NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##BC092442|NCOA2|10499|nuclear receptor coactivator 2##AF319458|PRDM14|63978|PR domain containing 14##AK022595|PRDM14|63978|PR domain containing 14##NM_024504|PRDM14|63978|PR domain containing 14##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1##AK303411|TRAM1|23471|translocation associated membrane protein 1##NM_014294|TRAM1|23471|translocation associated membrane protein 1##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2	0.0	
chr9	130627361	130627457	reg1034989.p1	3.628	+	TSC_hg19_v1_chr9_-_130617036 NM_000118 NM_001114753	-10382	-	TSC_hg19_v1_chr9_-_130616968 AK222669 AK302455	-10434	-	TSC_hg19_v1_chr9_-_130616938 BC014271 BC020391 X72012 AK290389 AK300156	-10553	-	BC001116 BC036803 AK313758 TSC_hg19_v1_chr9_-_130639955 BC100022 NM_000476	12571	-	AK300534 TSC_hg19_v1_chr9_-_130659688 AK057100	32219	-	TSC_hg19_v1_chr9_-_130661803 AK226174	34390	-	NM_000118|ENG|2022|endoglin##NM_001114753|ENG|2022|endoglin##AK222669|ENG|2022|endoglin##AK302455|ENG|2022|endoglin##BC014271|ENG|2022|endoglin##BC020391|ENG|2022|endoglin##X72012|ENG|2022|endoglin##AK290389|ENG|2022|endoglin##AK300156|ENG|2022|endoglin##BC001116|AK1|203|adenylate kinase 1##BC036803|AK1|203|adenylate kinase 1##AK313758|AK1|203|adenylate kinase 1##BC100022|AK1|203|adenylate kinase 1##NM_000476|AK1|203|adenylate kinase 1##AK300534|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK057100|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK226174|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	0.0	
chr1	113261297	113261401	reg1007502.p1	3.627	+	BC011803 BC064628 AL133644 AB527803 EU832164 EU832258 AK093270 AX748024 BC073828 NM_005167	-3438	-	TSC_hg19_v1_chr1_-_113250031 NM_001042678 NM_175744	-11323	-	TSC_hg19_v1_chr1_-_113249750 AK094474	-11601	-	NM_001004440 NM_182759 BC112268 BC117479 BC143949 BC144042 BC144043 AY325116 AY325119	1844	+	BC045664 AK094064 NM_001166496 AF239919 AL162079 TSC_hg19_v1_chr1_-_113498818 AK296688 AK312500 BC026317	237368	-	TSC_hg19_v1_chr1_-_113498861 AK303603 AJ438943 NM_003051	237552	-	BC011803|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC064628|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AL133644|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832164|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##EU832258|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##AK093270|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##BC073828|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_005167|PPM1J|333926|protein phosphatase, Mg2+/Mn2+ dependent, 1J##NM_001042678|RHOC|389|ras homolog gene family, member C##NM_175744|RHOC|389|ras homolog gene family, member C##AK094474|RHOC|389|ras homolog gene family, member C##NM_001004440|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##NM_182759|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC112268|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC117479|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC143949|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144042|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC144043|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325116|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##AY325119|FAM19A3|284467|family with sequence similarity 19 (chemokine (C-C motif)-like), member A3##BC045664|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK094064|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_001166496|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AF239919|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AL162079|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK296688|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK312500|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##BC026317|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AK303603|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##AJ438943|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)##NM_003051|SLC16A1|6566|solute carrier family 16, member 1 (monocarboxylic acid transporter 1)	0.0	
chr12	122326968	122327085	reg1034161.p3	3.627	+	TSC_hg19_v1_chr12_+_122326731 AB003177 NM_002813 AK315389 BC002383 BC004184 BC004213 DQ893594 EU831432 EU831524 AB528684	-331	+	AK057510 NM_001171993	-510	-	CU692906 DQ892664 DQ896049 BC024287 BC014790 X72389 TSC_hg19_v1_chr12_-_122296766 AK290826 NM_002150	-30333	-	TSC_hg19_v1_chr12_+_122356497 NM_001178003 NM_144668 BC028421 BC036233	29455	+	AK296159 TSC_hg19_v1_chr12_+_122459903 NM_001024808 NM_020993 AK316486 BC113627 BC094723 HQ258124 AB590498	132867	+	TSC_hg19_v1_chr12_+_122516655 BC151841 NM_014938	189581	+	NM_002813|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK315389|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC002383|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004184|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004213|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##DQ893594|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831432|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831524|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK057510|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_001171993|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_001178003|WDR66|144406|WD repeat domain 66##NM_144668|WDR66|144406|WD repeat domain 66##BC028421|WDR66|144406|WD repeat domain 66##BC036233|WDR66|144406|WD repeat domain 66##AK296159|BCL7A|605|B-cell CLL/lymphoma 7A##NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A##NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A##AK316486|BCL7A|605|B-cell CLL/lymphoma 7A##BC113627|BCL7A|605|B-cell CLL/lymphoma 7A##BC094723|BCL7A|605|B-cell CLL/lymphoma 7A##HQ258124|BCL7A|605|B-cell CLL/lymphoma 7A##BC151841|MLXIP|22877|MLX interacting protein##NM_014938|MLXIP|22877|MLX interacting protein	0.0	
chr12	57852725	57852858	reg1008495.p1	3.627	+	TSC_hg19_v1_chr12_+_57849089 NM_031479 AK075285 BC005161 AF412024	-3693	+	TSC_hg19_v1_chr12_+_57828511 AK314849 BC020693 NM_005538 X82540 BC130324 BC130326 AB590801	-24228	+	AB023219 AX775761 AX775763 TSC_hg19_v1_chr12_-_57824797	-27979	-	AK297899 NM_001160045 NM_001167609 NM_005269 X07384 AB239135 AB239136	1151	+	AK301095 AK057573 AB030239 NM_001080156	18888	-	TSC_hg19_v1_chr12_-_57873391 AK092763 AX747713 NM_001080157	20603	-	NM_031479|INHBE|83729|inhibin, beta E##AK075285|INHBE|83729|inhibin, beta E##BC005161|INHBE|83729|inhibin, beta E##AF412024|INHBE|83729|inhibin, beta E##AK314849|INHBC|3626|inhibin, beta C##BC020693|INHBC|3626|inhibin, beta C##NM_005538|INHBC|3626|inhibin, beta C##BC130324|INHBC|3626|inhibin, beta C##BC130326|INHBC|3626|inhibin, beta C##AB023219|R3HDM2|22864|R3H domain containing 2##AX775761|R3HDM2|22864|R3H domain containing 2##AX775763|R3HDM2|22864|R3H domain containing 2##AK297899|GLI1|2735|GLI family zinc finger 1##NM_001160045|GLI1|2735|GLI family zinc finger 1##NM_001167609|GLI1|2735|GLI family zinc finger 1##NM_005269|GLI1|2735|GLI family zinc finger 1##X07384|GLI1|2735|GLI family zinc finger 1##AB239135|GLI1|2735|GLI family zinc finger 1##AB239136|GLI1|2735|GLI family zinc finger 1##AK301095|ARHGAP9|64333|Rho GTPase activating protein 9##AK057573|ARHGAP9|64333|Rho GTPase activating protein 9##AB030239|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080156|ARHGAP9|64333|Rho GTPase activating protein 9##AK092763|ARHGAP9|64333|Rho GTPase activating protein 9##NM_001080157|ARHGAP9|64333|Rho GTPase activating protein 9	0.0	
chr15	69071357	69071467	reg1040433.p1	3.627	+	AK289678 NM_001190457	-147086	+	NM_001190456	-162534	+	TSC_hg19_v1_chr15_+_68871402 NM_006091	-200069	+	AB463390 AY349171 BC106719 BC125143 BT007436 DQ893294 DQ896729 U60823 TSC_hg19_v1_chr15_-_69113208 U73477 X75090 AK223280	41737	-	TSC_hg19_v1_chr15_-_69113235 BC007200 BC000608 AF025684 AK312703	41815	-	TSC_hg19_v1_chr15_-_69113264 NM_006305	41848	-	AK289678|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190457|CORO2B|10391|coronin, actin binding protein, 2B##NM_001190456|CORO2B|10391|coronin, actin binding protein, 2B##NM_006091|CORO2B|10391|coronin, actin binding protein, 2B##AY349171|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC106719|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC125143|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BT007436|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ893294|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##DQ896729|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U60823|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##U73477|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##X75090|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK223280|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC007200|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##BC000608|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AF025684|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##AK312703|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A##NM_006305|ANP32A|8125|acidic (leucine-rich) nuclear phosphoprotein 32 family, member A	0.01108	
chr19	49837282	49837390	reg1036822.p2	3.627	+	BC034948 BC039336 NM_014037	-8883	-	AK000048 TSC_hg19_v1_chr19_+_49669495	-167886	+	TSC_hg19_v1_chr19_+_49661048 AK074664 AF497623 AK292862 AY297044 AY297045 AY297046 AY046396 AJ575813 BC132727 BC144122 BC144123 AK295820	-176270	+	TSC_hg19_v1_chr19_+_49838662 AK301016	1322	+	TSC_hg19_v1_chr19_+_49838683 NM_001040031 NM_001774 AK301328	1342	+	TSC_hg19_v1_chr19_+_49838702 AL833693 BC110379	1376	+	BC034948|SLC6A16|28968|solute carrier family 6, member 16##NM_014037|SLC6A16|28968|solute carrier family 6, member 16##AK000048|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AF497623|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK292862|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297044|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297045|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY297046|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AY046396|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AJ575813|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC132727|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144122|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##BC144123|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK295820|TRPM4|54795|transient receptor potential cation channel, subfamily M, member 4##AK301016|CD37|951|CD37 molecule##NM_001040031|CD37|951|CD37 molecule##NM_001774|CD37|951|CD37 molecule##AK301328|CD37|951|CD37 molecule##AL833693|CD37|951|CD37 molecule##BC110379|CD37|951|CD37 molecule	0.0	
chr2	232422415	232422596	reg1000278.p1	3.627	+	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	-27351	-	BC033054 TSC_hg19_v1_chr2_-_232379076	-43423	-	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	-93270	-	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	35112	+	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	150729	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	150827	+	AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin##NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha	0.0	
chr2	99197272	99197359	reg1039718.p2	3.627	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-135957	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-234410	+	DQ426863 NM_001079878 NM_001298 DQ067460	-234682	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	27627	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	27735	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	27755	+	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)	0.06562	
chr4	183840318	183840498	reg1037629.p2	3.627	+	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	-1774	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	-1878	-	NM_001080477 HE578284 HE578285	-595254	+	TSC_hg19_v1_chr4_+_184020431 NM_024949	180070	+	NM_001111319	401518	-	NM_001185149	403170	-	NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_024949|WWC2|80014|WW and C2 domain containing 2##NM_001111319|CLDN22|53842|claudin 22##NM_001185149|CLDN24|100132463|claudin 24	0.0	
chr5	176815502	176815570	reg1034527.p1	3.627	+	AK096088 NM_001167579 NM_003052 TSC_hg19_v1_chr5_+_176811434 AK298299 BC053349 BC035294 BC050385 L13258	-4094	+	TSC_hg19_v1_chr5_+_176794314 AK098150	-21223	+	TSC_hg19_v1_chr5_+_176784947 AB590533	-30551	+	BC132952 BC132954 NM_001029886	12100	-	TSC_hg19_v1_chr5_-_176831183 BT007350	15689	-	BC012390 TSC_hg19_v1_chr5_-_176831506	15924	-	AK096088|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_001167579|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##NM_003052|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK298299|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC053349|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC035294|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##BC050385|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##L13258|SLC34A1|6569|solute carrier family 34 (sodium phosphate), member 1##AK098150|RGS14|10636|regulator of G-protein signaling 14##BC132952|PFN3|345456|profilin 3##BC132954|PFN3|345456|profilin 3##NM_001029886|PFN3|345456|profilin 3##BT007350|F12|2161|coagulation factor XII (Hageman factor)##BC012390|F12|2161|coagulation factor XII (Hageman factor)	0.366956	CTCF.p2:-54:0.367
chr6	104729408	104729512	reg1033307.p1	3.627	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	-2882555	+	BC037954 TSC_hg19_v1_chr6_+_101846686	-2882783	+	HM149340 TSC_hg19_v1_chr6_+_101841583	-2887954	+	TSC_hg19_v1_chr6_-_105307736 AK291760	578265	-	TSC_hg19_v1_chr6_-_105307774 BC038119 BC034982	578302	-	TSC_hg19_v1_chr6_-_105307783 AK131207 NM_020771	578328	-	NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291760|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC038119|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##BC034982|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##AK131207|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1##NM_020771|HACE1|57531|HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1	1.775613	CTCF.p2:-12:0.983	CTCF.p2:79:0.770
chr6	166913313	166913493	reg1030075.p2	3.627	+	TSC_hg19_v1_chr6_-_166796469 AF125101 AF151887 NM_016098	-116893	-	CU674406 TSC_hg19_v1_chr6_-_166796429 BC000810 AK312201 AK310934	-116994	-	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	-157369	-	DQ891864 DQ895053 L07598 TSC_hg19_v1_chr6_-_167040629	127174	-	TSC_hg19_v1_chr6_-_167040662 X85106	127266	-	TSC_hg19_v1_chr6_-_167040713 BC002363 NM_021135	127315	-	AF125101|BRP44L|51660|brain protein 44-like##AF151887|BRP44L|51660|brain protein 44-like##NM_016098|BRP44L|51660|brain protein 44-like##BC000810|BRP44L|51660|brain protein 44-like##AK312201|BRP44L|51660|brain protein 44-like##AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1##DQ891864|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##DQ895053|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##L07598|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##X85106|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##BC002363|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2##NM_021135|RPS6KA2|6196|ribosomal protein S6 kinase, 90kDa, polypeptide 2	0.0	
chr7	2738795	2738976	reg1025140.p2	3.627	+	AK289723 AB075830 BC146753 NM_133463	-19727	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-67182	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	-67282	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	144923	-	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	344577	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	602114	+	AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1	0.0	
chr8	51627691	51627800	reg1035701.p1	3.627	+	AJ003030 NM_018967	-803149	+	NM_001007176 BC017981 AJ276240	-1642836	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-1793835	-	EU170240 AY877349 NM_144651	1094208	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	1183857	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	1183982	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.0	
chr9	114792544	114792673	reg1032532.p2	3.627	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-133141	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-133494	+	AL833535 NM_173521	-246833	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	144912	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	302679	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	303241	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chr9	136890462	136890586	reg1029141.p1	3.627	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	-33078	-	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-285538	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-287046	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	42669	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	43102	-	NM_017588 TSC_hg19_v1_chr9_+_137001212	110686	+	BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3##NM_017588|WDR5|11091|WD repeat domain 5	0.0	
chr12	39305542	39305639	reg1037480.p1	3.626	+	AB527319 AM392913 AY177785 BC048260 BC068040 AK307908 TSC_hg19_v1_chr12_-_39299394 BC110577 BC110578 NM_153634 BX538055	-6207	-	NM_001013620 TSC_hg19_v1_chr12_+_38710583 AK307955 BC137413 BC137414 BC144617 AY845858	-594965	+	TSC_hg19_v1_chr12_+_34175430 BC070347 BC033730 BC090948 AK292488 BC075807 DQ892056 DQ895250	-5130117	+	AB051495 AM177179 AB384627 AY368076 BC136414 BC041430 AF155117 AF450487 TSC_hg19_v1_chr12_-_39836923 AK000059 AB290166 NM_001173463 NM_001173464 NM_001173465 NM_017641	531409	-	AK314254 NM_005164	708252	-	BC038754 NM_001031748 BC048120 AK097445	714405	+	AM392913|CPNE8|144402|copine VIII##AY177785|CPNE8|144402|copine VIII##BC048260|CPNE8|144402|copine VIII##BC068040|CPNE8|144402|copine VIII##AK307908|CPNE8|144402|copine VIII##BC110577|CPNE8|144402|copine VIII##BC110578|CPNE8|144402|copine VIII##NM_153634|CPNE8|144402|copine VIII##BX538055|CPNE8|144402|copine VIII##NM_001013620|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AK307955|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137413|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC137414|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##AY845858|ALG10B|144245|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog B (yeast)##BC070347|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC033730|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC090948|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AK292488|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##BC075807|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ892056|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##DQ895250|ALG10|84920|asparagine-linked glycosylation 10, alpha-1,2-glucosyltransferase homolog (S. pombe)##AB051495|KIF21A|55605|kinesin family member 21A##AM177179|KIF21A|55605|kinesin family member 21A##AY368076|KIF21A|55605|kinesin family member 21A##BC136414|KIF21A|55605|kinesin family member 21A##BC041430|KIF21A|55605|kinesin family member 21A##AF155117|KIF21A|55605|kinesin family member 21A##AF450487|KIF21A|55605|kinesin family member 21A##AK000059|KIF21A|55605|kinesin family member 21A##AB290166|KIF21A|55605|kinesin family member 21A##NM_001173463|KIF21A|55605|kinesin family member 21A##NM_001173464|KIF21A|55605|kinesin family member 21A##NM_001173465|KIF21A|55605|kinesin family member 21A##NM_017641|KIF21A|55605|kinesin family member 21A##AK314254|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##NM_005164|ABCD2|225|ATP-binding cassette, sub-family D (ALD), member 2##BC038754|C12orf40|283461|chromosome 12 open reading frame 40##NM_001031748|C12orf40|283461|chromosome 12 open reading frame 40##BC048120|C12orf40|283461|chromosome 12 open reading frame 40##AK097445|C12orf40|283461|chromosome 12 open reading frame 40	0.737375	CTCF.p2:15:0.737
chr12	52399702	52399788	reg1041810.p1	3.626	+	AK299496 NM_020327	-52582	+	TSC_hg19_v1_chr12_+_52345493 AK299120 L10125 BC000254 AB384957 BT007072 CU674106 EU831986 EU832079 L10126 U14722 Z22536	-54248	+	TSC_hg19_v1_chr12_+_52345437 BC040531 NM_004302 NM_020328	-54300	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	996	+	AK297526 NM_001202233	16870	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	45471	+	AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB##AK299120|ACVR1B|91|activin A receptor, type IB##L10125|ACVR1B|91|activin A receptor, type IB##BC000254|ACVR1B|91|activin A receptor, type IB##BT007072|ACVR1B|91|activin A receptor, type IB##EU831986|ACVR1B|91|activin A receptor, type IB##EU832079|ACVR1B|91|activin A receptor, type IB##L10126|ACVR1B|91|activin A receptor, type IB##U14722|ACVR1B|91|activin A receptor, type IB##Z22536|ACVR1B|91|activin A receptor, type IB##BC040531|ACVR1B|91|activin A receptor, type IB##NM_004302|ACVR1B|91|activin A receptor, type IB##NM_020328|ACVR1B|91|activin A receptor, type IB##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1	0.277497	CTCF.p2:-25:0.277
chr15	80150954	80151082	reg1039824.p2	3.626	+	AB028947 NM_015206 BC152466	-426159	+	TSC_hg19_v1_chr15_+_79603557 AJ132270 CR457384	-547451	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	-547515	+	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	38362	-	NM_001199758	38608	-	AL109714 NM_001100879	56579	-	AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##AJ132270|TMED3|23423|transmembrane emp24 protein transport domain containing 3##CR457384|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL109714|ST20|400410|suppressor of tumorigenicity 20##NM_001100879|ST20|400410|suppressor of tumorigenicity 20	0.968611	CTCF.p2:3:0.969
chr17	18467169	18467350	reg1009611.p1	3.626	+	AK296659 NM_001040078 AK315818 BC073889 BC105943 TSC_hg19_v1_chr17_+_18380141 CU687266	-87127	+	BC036791 NM_001145127 AK298286 BC026998	-186172	+	TSC_hg19_v1_chr17_-_18266810 BC007979 BC022874 BC038598 AK223552 AK298415 AK302834 AF017065 NM_004169 NM_148918	-200475	-	BC101585 BC104815 BC143561 TSC_hg19_v1_chr17_-_18528914 BC062767 BX647826 AK093811 AX748319	61648	-	NM_001039397	80480	-	NM_001145045	118312	-	AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001040078|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##AK315818|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC073889|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##BC036791|EVPLL|645027|envoplakin-like##NM_001145127|EVPLL|645027|envoplakin-like##AK298286|EVPLL|645027|envoplakin-like##BC026998|EVPLL|645027|envoplakin-like##BC007979|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC022874|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC038598|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK223552|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK298415|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK302834|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AF017065|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_004169|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_148918|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC101585|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC104815|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC143561|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC062767|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BX647826|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##AK093811|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##NM_001039397|TBC1D28|254272|TBC1 domain family, member 28##NM_001145045|ZNF286B|729288|zinc finger protein 286B	0.052345	
chr1	75804838	75804972	reg1041384.p1	3.626	+	NM_001001933 BC040321	-210786	+	NM_001130042 NM_001130043 NM_001134759 NM_001889	-605814	-	NM_001162916 AK098237 BC071765 NM_138467 AK294264 AK299849 BC009514 AK311272 AB590606	-606025	+	AK128063 BC028743 BC034580 BC051740 NM_001130058 NM_152697 AK093170 AX747970	271876	-	AK299573 TSC_hg19_v1_chr1_-_76081791	276841	-	NM_000016 NM_001127328 TSC_hg19_v1_chr1_+_76190106	385169	+	NM_001001933|LHX8|431707|LIM homeobox 8##BC040321|LHX8|431707|LIM homeobox 8##NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001162916|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK098237|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC071765|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##NM_138467|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK294264|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK299849|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC009514|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK311272|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK128063|SLC44A5|204962|solute carrier family 44, member 5##BC028743|SLC44A5|204962|solute carrier family 44, member 5##BC034580|SLC44A5|204962|solute carrier family 44, member 5##BC051740|SLC44A5|204962|solute carrier family 44, member 5##NM_001130058|SLC44A5|204962|solute carrier family 44, member 5##NM_152697|SLC44A5|204962|solute carrier family 44, member 5##AK093170|SLC44A5|204962|solute carrier family 44, member 5##AK299573|SLC44A5|204962|solute carrier family 44, member 5##NM_000016|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##NM_001127328|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain	0.0	
chr18	46695480	46695602	reg1038422.p1	3.626	+	AF010193 NM_001190821 NM_005904	-218461	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	-218774	-	AK301535 NM_001190822	-219839	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	291510	-	TSC_hg19_v1_chr18_-_47013575 AB097012	318024	-	TSC_hg19_v1_chr18_-_47013599 BC093004	318058	-	AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin##AB097012|C18orf32|497661|chromosome 18 open reading frame 32##BC093004|C18orf32|497661|chromosome 18 open reading frame 32	0.0	
chr19	47799207	47799388	reg1001140.p1	3.626	+	TSC_hg19_v1_chr19_+_47778141 BC022076 BC045749 NM_178511 BC064510	-21161	+	TSC_hg19_v1_chr19_+_47759811 BC002787 BC009743	-39479	+	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	-39536	+	BC008982 NM_001736 TSC_hg19_v1_chr19_+_47813117 M62505	13805	+	AB038237 NM_018485	41073	+	NM_014681 TSC_hg19_v1_chr19_+_47852571 AK304710	53272	+	BC022076|PRR24|255783|proline rich 24##BC045749|PRR24|255783|proline rich 24##NM_178511|PRR24|255783|proline rich 24##BC064510|PRR24|255783|proline rich 24##BC002787|CCDC9|26093|coiled-coil domain containing 9##BC009743|CCDC9|26093|coiled-coil domain containing 9##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9##BC008982|C5AR1|728|complement component 5a receptor 1##NM_001736|C5AR1|728|complement component 5a receptor 1##M62505|C5AR1|728|complement component 5a receptor 1##AB038237|GPR77|27202|G protein-coupled receptor 77##NM_018485|GPR77|27202|G protein-coupled receptor 77##NM_014681|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34##AK304710|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34	0.0	
chr19	50432365	50432546	reg1036306.p2	3.626	+	NM_001193646 AK091985 AB021663 AK024402 TSC_hg19_v1_chr19_+_50432461 AB073613 BC005174	-21	+	NM_012068 AK290592	-467	+	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	-19353	-	AJ880387 TSC_hg19_v1_chr19_-_50432664 AJ880386	202	-	AJ880389 TSC_hg19_v1_chr19_-_50432676	219	-	X58521 TSC_hg19_v1_chr19_-_50432678	223	-	NM_001193646|ATF5|22809|activating transcription factor 5##AK091985|ATF5|22809|activating transcription factor 5##AB021663|ATF5|22809|activating transcription factor 5##AK024402|ATF5|22809|activating transcription factor 5##AB073613|ATF5|22809|activating transcription factor 5##BC005174|ATF5|22809|activating transcription factor 5##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5##CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##AJ880387|IL4I1|259307|interleukin 4 induced 1##AJ880386|IL4I1|259307|interleukin 4 induced 1##AJ880389|IL4I1|259307|interleukin 4 induced 1##X58521|NUP62|23636|nucleoporin 62kDa	0.0	
chr20	43271177	43271295	reg1037392.p1	3.626	+	AK309209 TSC_hg19_v1_chr20_+_43211227	-60013	+	NM_007066 NM_181804 NM_181805 BC104256 BC104257 TSC_hg19_v1_chr20_+_43160482 AK312048 AF182032	-110720	+	AK295120 AK309993 TSC_hg19_v1_chr20_-_43150704 NM_006811 NM_198941	-120529	-	AB528992 DQ892681 DQ895924 TSC_hg19_v1_chr20_-_43280341 X02994 AK223397	9062	-	BC007678 TSC_hg19_v1_chr20_-_43280372 BC040226 NM_000022	9139	-	BC058074 TSC_hg19_v1_chr20_+_43343549 AK074695	72306	+	AK309209|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_007066|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_181804|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##NM_181805|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##BC104256|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##BC104257|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AK312048|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AF182032|PKIG|11142|protein kinase (cAMP-dependent, catalytic) inhibitor gamma##AK295120|SERINC3|10955|serine incorporator 3##AK309993|SERINC3|10955|serine incorporator 3##NM_006811|SERINC3|10955|serine incorporator 3##NM_198941|SERINC3|10955|serine incorporator 3##DQ892681|ADA|100|adenosine deaminase##DQ895924|ADA|100|adenosine deaminase##X02994|ADA|100|adenosine deaminase##AK223397|ADA|100|adenosine deaminase##BC007678|ADA|100|adenosine deaminase##BC040226|ADA|100|adenosine deaminase##NM_000022|ADA|100|adenosine deaminase##BC058074|WISP2|8839|WNT1 inducible signaling pathway protein 2	0.0	
chr3	57812147	57812261	reg1033193.p2	3.626	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-69002	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-133465	-	TSC_hg19_v1_chr3_-_57583171 NM_001660	-229014	-	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	181943	+	NM_004944	388193	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	411079	+	AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_001660|ARF4|378|ADP-ribosylation factor 4##AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6	0.159381	
chr4	10666140	10666321	reg1032389.p2	3.626	+	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-207220	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-547694	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-547752	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	20171	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	764302	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2819721	-	BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr5	142150447	142150627	reg1034879.p2	3.626	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-229	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-565	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-72966	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	632286	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	632569	-	BC015610 TSC_hg19_v1_chr5_-_142783214	632674	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr5	1800161	1800296	reg1037892.p1	3.626	+	TSC_hg19_v1_chr5_-_1799952 AK312001 BC104652 EF036487 NM_032479	-256	-	TSC_hg19_v1_chr5_-_1799926 AB049654 AF151109 AF155653 BC020642	-305	-	TSC_hg19_v1_chr5_-_1634100 BC019918 BC045555 AK311210 AK311251	-166110	-	TSC_hg19_v1_chr5_+_1801520 NM_004553 AK022503 BC038664 AF044959 BC046155 CR456880 HQ257915	1284	+	AB527533 BC110912 BC144204 BC136505 BC136506 AF124733 NM_016358	82593	-	AB188492 NM_001134222 NM_033267 BC065189	951543	-	AK312001|MRPL36|64979|mitochondrial ribosomal protein L36##BC104652|MRPL36|64979|mitochondrial ribosomal protein L36##EF036487|MRPL36|64979|mitochondrial ribosomal protein L36##NM_032479|MRPL36|64979|mitochondrial ribosomal protein L36##AB049654|MRPL36|64979|mitochondrial ribosomal protein L36##AF151109|MRPL36|64979|mitochondrial ribosomal protein L36##AF155653|MRPL36|64979|mitochondrial ribosomal protein L36##BC020642|MRPL36|64979|mitochondrial ribosomal protein L36##BC019918|LOC728613|728613|programmed cell death 6 pseudogene##BC045555|LOC728613|728613|programmed cell death 6 pseudogene##AK311210|LOC728613|728613|programmed cell death 6 pseudogene##NM_004553|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AK022503|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC038664|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##AF044959|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC046155|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##CR456880|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##HQ257915|NDUFS6|4726|NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase)##BC110912|IRX4|50805|iroquois homeobox 4##BC144204|IRX4|50805|iroquois homeobox 4##BC136505|IRX4|50805|iroquois homeobox 4##BC136506|IRX4|50805|iroquois homeobox 4##AF124733|IRX4|50805|iroquois homeobox 4##NM_016358|IRX4|50805|iroquois homeobox 4##AB188492|IRX2|153572|iroquois homeobox 2##NM_001134222|IRX2|153572|iroquois homeobox 2##NM_033267|IRX2|153572|iroquois homeobox 2##BC065189|IRX2|153572|iroquois homeobox 2	0.0	
chr5	55199371	55199448	reg1038701.p2	3.626	+	NM_001242636 NM_001242639	-50260	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-52140	+	NM_001166534 AK093439 AX748127	-136684	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	91354	-	AK123389 NM_024669	329776	-	NM_005921	911490	+	NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##NM_001166534|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##AK093439|DDX4|54514|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.021343	
chr6	12010933	12011113	reg1024251.p1	3.626	+	NM_001143948 NM_032744	-231744	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-472525	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-628483	-	NM_002114	1700	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	279570	+	TSC_hg19_v1_chr6_+_12514301 D28417	503279	+	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr8	126265540	126265680	reg1034994.p1	3.626	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-161513	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-161553	-	TSC_hg19_v1_chr8_-_126104024 AK296970	-161588	-	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	176969	+	TSC_hg19_v1_chr8_-_126963395 BX648371	697803	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	1304945	-	NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##AK296970|KIAA0196|9897|KIAA0196##BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B	0.0	
chr8	43392009	43392113	reg1034471.p2	3.626	+	AY462869 AY462870 NM_001002920 NM_001005365 AB464430	-244456	+	TSC_hg19_v1_chr8_+_42995654 BC042037	-396414	+	TSC_hg19_v1_chr8_+_42995639 AK304441	-396428	+	TSC_hg19_v1_chr8_+_48173495 NM_001080394	4781434	+	TSC_hg19_v1_chr8_+_48173521 AK303579	4781458	+	TSC_hg19_v1_chr8_+_48173532 AK294248 AK309842	4781471	+	AY462869|POTEA|340441|POTE ankyrin domain family, member A##AY462870|POTEA|340441|POTE ankyrin domain family, member A##NM_001002920|POTEA|340441|POTE ankyrin domain family, member A##NM_001005365|POTEA|340441|POTE ankyrin domain family, member A##BC042037|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##AK304441|HGSNAT|138050|heparan-alpha-glucosaminide N-acetyltransferase##NM_001080394|KIAA0146|23514|KIAA0146##AK303579|KIAA0146|23514|KIAA0146##AK294248|KIAA0146|23514|KIAA0146##AK309842|KIAA0146|23514|KIAA0146	0.026945	
chr11	117480812	117480909	reg1035802.p1	3.625	+	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-282029	+	TSC_hg19_v1_chr11_+_117198594 BX648682 NM_014956 BC054015	-282276	+	TSC_hg19_v1_chr11_-_117186973 AF324837 AB032975 AF201468 AF190725 BC036084 AK075049 BC065492 NM_012104 NM_138971 NM_138972 NM_138973	-293880	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	186993	-	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	187099	-	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	214574	-	AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##BX648682|CEP164|22897|centrosomal protein 164kDa##NM_014956|CEP164|22897|centrosomal protein 164kDa##BC054015|CEP164|22897|centrosomal protein 164kDa##AF324837|BACE1|23621|beta-site APP-cleaving enzyme 1##AB032975|BACE1|23621|beta-site APP-cleaving enzyme 1##AF201468|BACE1|23621|beta-site APP-cleaving enzyme 1##AF190725|BACE1|23621|beta-site APP-cleaving enzyme 1##BC036084|BACE1|23621|beta-site APP-cleaving enzyme 1##AK075049|BACE1|23621|beta-site APP-cleaving enzyme 1##BC065492|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_012104|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138971|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138972|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138973|BACE1|23621|beta-site APP-cleaving enzyme 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2	0.109474	
chr11	119598245	119598330	reg1039207.p2	3.625	+	BC037832 NM_006288	-304044	-	BC005175 S59749 AL161958 BC065559 BC062593 AF261093 TSC_hg19_v1_chr11_-_119293883 AK057865 AK094374	-304378	-	AK057225 TSC_hg19_v1_chr11_-_119252366 BC041366 NM_001243759 NM_004205	-345888	-	X76400 AB527890 AF110314 AY029539 HQ258297 BC113471 BC104948 AF060231 NM_002855 NM_203285 NM_203286 TSC_hg19_v1_chr11_-_119599507	1095	-	TSC_hg19_v1_chr11_-_119999562 AK299459 AK303969	401259	-	AK299472 TSC_hg19_v1_chr11_-_120008323	409985	-	BC037832|THY1|7070|Thy-1 cell surface antigen##NM_006288|THY1|7070|Thy-1 cell surface antigen##BC005175|THY1|7070|Thy-1 cell surface antigen##S59749|THY1|7070|Thy-1 cell surface antigen##AL161958|THY1|7070|Thy-1 cell surface antigen##BC065559|THY1|7070|Thy-1 cell surface antigen##AF261093|THY1|7070|Thy-1 cell surface antigen##AK057865|THY1|7070|Thy-1 cell surface antigen##AK094374|THY1|7070|Thy-1 cell surface antigen##AK057225|USP2|9099|ubiquitin specific peptidase 2##BC041366|USP2|9099|ubiquitin specific peptidase 2##NM_001243759|USP2|9099|ubiquitin specific peptidase 2##NM_004205|USP2|9099|ubiquitin specific peptidase 2##X76400|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF110314|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AY029539|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##HQ258297|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC113471|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##BC104948|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AF060231|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_002855|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203285|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##NM_203286|PVRL1|5818|poliovirus receptor-related 1 (herpesvirus entry mediator C)##AK299459|TRIM29|23650|tripartite motif containing 29##AK303969|TRIM29|23650|tripartite motif containing 29##AK299472|TRIM29|23650|tripartite motif containing 29	0.0	
chr12	79814086	79814203	reg1035231.p1	3.625	+	CR627387 NM_001135806 AK308743	-374693	+	TSC_hg19_v1_chr12_+_79258794 BC058917	-555327	+	TSC_hg19_v1_chr12_+_79258597 BC041373	-555552	+	AB590922 CR536549 BC007018 TSC_hg19_v1_chr12_-_80084318	270071	-	U63809 TSC_hg19_v1_chr12_-_80084784 NM_002583	270621	-	AK302692 NM_001143886	493546	-	CR627387|SYT1|6857|synaptotagmin I##NM_001135806|SYT1|6857|synaptotagmin I##AK308743|SYT1|6857|synaptotagmin I##BC058917|SYT1|6857|synaptotagmin I##BC041373|SYT1|6857|synaptotagmin I##CR536549|PAWR|5074|PRKC, apoptosis, WT1, regulator##BC007018|PAWR|5074|PRKC, apoptosis, WT1, regulator##U63809|PAWR|5074|PRKC, apoptosis, WT1, regulator##NM_002583|PAWR|5074|PRKC, apoptosis, WT1, regulator##AK302692|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A##NM_001143886|PPP1R12A|4659|protein phosphatase 1, regulatory subunit 12A	0.78334	CTCF.p2:-11:0.783
chr17	17897852	17897994	reg1020253.p2	3.625	+	NM_001130090 NM_001130091 NM_001130092 NM_031294 TSC_hg19_v1_chr17_+_17876186 BC047873 AL136926 AK293011 BC040276 BC050419 BC050665 AK093317 AX748051	-21723	+	TSC_hg19_v1_chr17_-_17875715 AK124331 AK295111 AK301944 AK303305 AK299872 AF467441 BC051650 AK294846 NM_001033551 NM_001082968	-22182	-	TSC_hg19_v1_chr17_-_17740317 BC057388 NM_001005291 NM_004176	-157599	-	AM393241 CU678578 CU689282 AB528073 AF070584 BC032126 AF052185 AY203943 TSC_hg19_v1_chr17_-_17942481 BC004114 NM_145691 AK290257 AK294487 AK296382	44480	-	TSC_hg19_v1_chr17_+_17942750 BC041829 NM_024052 AK315083 AK074284 AK127580 BC000636	44884	+	TSC_hg19_v1_chr17_+_17991289 AK313362 BC062572 BC000493 NM_001388 AK297569 X80754 AK295575 DQ890768 DQ893929 BT006976	93345	+	NM_001130090|LRRC48|83450|leucine rich repeat containing 48##NM_001130091|LRRC48|83450|leucine rich repeat containing 48##NM_001130092|LRRC48|83450|leucine rich repeat containing 48##NM_031294|LRRC48|83450|leucine rich repeat containing 48##BC047873|LRRC48|83450|leucine rich repeat containing 48##AL136926|LRRC48|83450|leucine rich repeat containing 48##AK293011|LRRC48|83450|leucine rich repeat containing 48##BC040276|LRRC48|83450|leucine rich repeat containing 48##BC050419|LRRC48|83450|leucine rich repeat containing 48##BC050665|LRRC48|83450|leucine rich repeat containing 48##AK093317|LRRC48|83450|leucine rich repeat containing 48##AK124331|TOM1L2|146691|target of myb1-like 2 (chicken)##AK295111|TOM1L2|146691|target of myb1-like 2 (chicken)##AK301944|TOM1L2|146691|target of myb1-like 2 (chicken)##AK303305|TOM1L2|146691|target of myb1-like 2 (chicken)##AK299872|TOM1L2|146691|target of myb1-like 2 (chicken)##AF467441|TOM1L2|146691|target of myb1-like 2 (chicken)##BC051650|TOM1L2|146691|target of myb1-like 2 (chicken)##AK294846|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001033551|TOM1L2|146691|target of myb1-like 2 (chicken)##NM_001082968|TOM1L2|146691|target of myb1-like 2 (chicken)##BC057388|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_001005291|SREBF1|6720|sterol regulatory element binding transcription factor 1##NM_004176|SREBF1|6720|sterol regulatory element binding transcription factor 1##AM393241|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF070584|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC032126|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AF052185|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AY203943|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC004114|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##NM_145691|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK290257|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##AK294487|ATPAF2|91647|ATP synthase mitochondrial F1 complex assembly factor 2##BC041829|C17orf39|79018|chromosome 17 open reading frame 39##NM_024052|C17orf39|79018|chromosome 17 open reading frame 39##AK315083|C17orf39|79018|chromosome 17 open reading frame 39##AK074284|C17orf39|79018|chromosome 17 open reading frame 39##AK127580|C17orf39|79018|chromosome 17 open reading frame 39##BC000636|C17orf39|79018|chromosome 17 open reading frame 39##AK313362|DRG2|1819|developmentally regulated GTP binding protein 2##BC062572|DRG2|1819|developmentally regulated GTP binding protein 2##BC000493|DRG2|1819|developmentally regulated GTP binding protein 2##NM_001388|DRG2|1819|developmentally regulated GTP binding protein 2##AK297569|DRG2|1819|developmentally regulated GTP binding protein 2##X80754|DRG2|1819|developmentally regulated GTP binding protein 2##AK295575|DRG2|1819|developmentally regulated GTP binding protein 2##DQ890768|DRG2|1819|developmentally regulated GTP binding protein 2##DQ893929|DRG2|1819|developmentally regulated GTP binding protein 2##BT006976|DRG2|1819|developmentally regulated GTP binding protein 2	0.125666	
chr17	72810858	72811022	reg1029272.p2	3.625	+	NM_017728 AK291159 TSC_hg19_v1_chr17_+_72772637 AK296621 AK000262 AK074029 BC011552 BC037278	-38284	+	AL050269 AK225602 AK312958 BC004225 AK308569 BC004195 NM_015654 TSC_hg19_v1_chr17_-_72772477 AK123115	-38469	-	TSC_hg19_v1_chr17_+_72744928 AB528945	-65986	+	AL137521 BC037584 TSC_hg19_v1_chr17_+_72832152	21168	+	BC140801 BC144586 AB208799 NM_000835	45005	-	BT006684 CU678312 AB463633 AK223530 J03826 AK098648 AK293210 AK301779 BC063493 BC002960 AK298908 AK094120 AK293208 BC018911 BC034763 BC011521 AK295307 NM_004110 NM_024417	58171	-	NM_017728|TMEM104|54868|transmembrane protein 104##AK291159|TMEM104|54868|transmembrane protein 104##AK296621|TMEM104|54868|transmembrane protein 104##AK000262|TMEM104|54868|transmembrane protein 104##AK074029|TMEM104|54868|transmembrane protein 104##BC011552|TMEM104|54868|transmembrane protein 104##BC037278|TMEM104|54868|transmembrane protein 104##AL050269|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK225602|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK312958|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##BC004225|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK308569|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##BC004195|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##NM_015654|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AK123115|NAT9|26151|N-acetyltransferase 9 (GCN5-related, putative)##AL137521|TMEM104|54868|transmembrane protein 104##BC140801|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##BC144586|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##AB208799|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##NM_000835|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##BT006684|FDXR|2232|ferredoxin reductase##AK223530|FDXR|2232|ferredoxin reductase##J03826|FDXR|2232|ferredoxin reductase##AK098648|FDXR|2232|ferredoxin reductase##AK293210|FDXR|2232|ferredoxin reductase##AK301779|FDXR|2232|ferredoxin reductase##BC063493|FDXR|2232|ferredoxin reductase##BC002960|FDXR|2232|ferredoxin reductase##AK298908|FDXR|2232|ferredoxin reductase##AK094120|FDXR|2232|ferredoxin reductase##AK293208|FDXR|2232|ferredoxin reductase##BC018911|FDXR|2232|ferredoxin reductase##BC034763|FDXR|2232|ferredoxin reductase##BC011521|FDXR|2232|ferredoxin reductase##AK295307|FDXR|2232|ferredoxin reductase##NM_004110|FDXR|2232|ferredoxin reductase##NM_024417|FDXR|2232|ferredoxin reductase	0.019423	
chr17	73852086	73852198	reg1032230.p2	3.625	+	AB464357 CU679759 DQ891052 DQ894231 TSC_hg19_v1_chr17_-_73851417 AK293214 AF087866 BC007452 AK057881 BC010616 AK294082 AK294155 AK300875 NM_012478	-704	-	TSC_hg19_v1_chr17_-_73840622 BC067084 NM_199242 AK300316	-11358	-	TSC_hg19_v1_chr17_-_73840495 AK024474	-11631	-	TSC_hg19_v1_chr17_-_73874063 BC017299	21921	-	TSC_hg19_v1_chr17_-_73874663 AY026763 NM_033452	22509	-	TSC_hg19_v1_chr17_-_73893051 BC021259 NM_173547	40921	-	DQ891052|WBP2|23558|WW domain binding protein 2##DQ894231|WBP2|23558|WW domain binding protein 2##AK293214|WBP2|23558|WW domain binding protein 2##AF087866|WBP2|23558|WW domain binding protein 2##BC007452|WBP2|23558|WW domain binding protein 2##AK057881|WBP2|23558|WW domain binding protein 2##BC010616|WBP2|23558|WW domain binding protein 2##AK294082|WBP2|23558|WW domain binding protein 2##AK294155|WBP2|23558|WW domain binding protein 2##AK300875|WBP2|23558|WW domain binding protein 2##NM_012478|WBP2|23558|WW domain binding protein 2##BC067084|UNC13D|201294|unc-13 homolog D (C. elegans)##NM_199242|UNC13D|201294|unc-13 homolog D (C. elegans)##AK300316|UNC13D|201294|unc-13 homolog D (C. elegans)##AK024474|UNC13D|201294|unc-13 homolog D (C. elegans)##BC017299|TRIM47|91107|tripartite motif containing 47##AY026763|TRIM47|91107|tripartite motif containing 47##NM_033452|TRIM47|91107|tripartite motif containing 47##BC021259|TRIM65|201292|tripartite motif containing 65##NM_173547|TRIM65|201292|tripartite motif containing 65	0.019628	
chr19	10230450	10230555	reg1019237.p1	3.625	+	NM_002566 BC073827	-8298	+	BC171852 NM_001040664 NM_001198690 NM_020230 BC033202 TSC_hg19_v1_chr19_+_10217035 BC009833 AJ292529 CU679511 AJ300588	-13513	+	AY358276 BC142632 AB054064 NM_031917 AF230330	-17102	-	AB528489 BT006889 CR457134 CU678971 DQ890616 DQ896801 AF020833 U96074 TSC_hg19_v1_chr19_-_10230579 AK293374 AF094850 AK309944 AK316040 AK291320 BC000733 BC008469 AK316335 AK315896 AK296377 AK311624 NM_003755	64	-	AF290894 TSC_hg19_v1_chr19_-_10291113 AB384943	60582	-	AB209413 TSC_hg19_v1_chr19_-_10305579	75055	-	NM_002566|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BC073827|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BC171852|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001040664|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001198690|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_020230|PPAN|56342|peter pan homolog (Drosophila)##BC033202|PPAN|56342|peter pan homolog (Drosophila)##BC009833|PPAN|56342|peter pan homolog (Drosophila)##AJ292529|PPAN|56342|peter pan homolog (Drosophila)##AJ300588|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##AY358276|ANGPTL6|83854|angiopoietin-like 6##BC142632|ANGPTL6|83854|angiopoietin-like 6##AB054064|ANGPTL6|83854|angiopoietin-like 6##NM_031917|ANGPTL6|83854|angiopoietin-like 6##AF230330|ANGPTL6|83854|angiopoietin-like 6##BT006889|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##CR457134|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##DQ890616|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##DQ896801|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AF020833|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##U96074|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK293374|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AF094850|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK309944|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK316040|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK291320|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##BC000733|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##BC008469|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK316335|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK315896|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AK296377|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##NM_003755|EIF3G|8666|eukaryotic translation initiation factor 3, subunit G##AB209413|DNMT1|1786|DNA (cytosine-5-)-methyltransferase 1	0.0	
chr22	38864142	38864239	reg1037761.p1	3.625	+	TSC_hg19_v1_chr22_+_38864047 AK292102 AL035082 NM_006855 NM_016657 AK222930 BC001277 AK129888 AK223238 AL035081 BC096722 BC098131 BC098156 BC098336 CR456509 CU013108 CU013396 DQ891740 DQ894917 AB528157 CU674644	-64	+	CR456507 BC039618 U24056 NM_152868 BC032562	-13082	-	NM_004981 S72503 U07364	-24158	-	TSC_hg19_v1_chr22_-_38881534 BC045747	17345	-	TSC_hg19_v1_chr22_-_38902283 BC000595 AL713763	38099	-	AB209595 TSC_hg19_v1_chr22_-_38902309 AK024985 AK074224	38116	-	AK292102|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AL035082|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##NM_006855|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##NM_016657|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AK222930|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC001277|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AK129888|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AK223238|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##AL035081|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC096722|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC098131|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC098156|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##BC098336|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##CR456509|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##CU013108|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##CU013396|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##DQ891740|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##DQ894917|KDELR3|11015|KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3##CR456507|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##BC039618|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##U24056|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##NM_152868|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##BC032562|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##NM_004981|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##S72503|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##U07364|KCNJ4|3761|potassium inwardly-rectifying channel, subfamily J, member 4##BC045747|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##BC000595|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AL713763|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AB209595|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AK024985|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17##AK074224|DDX17|10521|DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	0.602844	CTCF.p2:85:0.603
chr3	181630199	181630265	reg1037489.p1	3.625	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-200094	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-200519	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-212840	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	881055	+	AK296750 TSC_hg19_v1_chr3_+_182511291	881063	+	TSC_hg19_v1_chr3_+_182511375 AF156548	881157	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.0	
chr4	14167211	14167391	reg1035089.p1	3.625	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-537984	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-617887	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-621226	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	836408	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	836694	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	836996	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.105233	
chr4	181124609	181124760	reg1034757.p2	3.625	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-2761041	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-2761091	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-2761143	-	TSC_hg19_v1_chr4_+_183065111 AK308489	1940441	+	NM_001080477 HE578284 HE578285	2120470	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	2713846	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.0	
chr4	24477992	24478081	reg1036516.p1	3.625	+	AF159714 AF186379 AB061325 AK296591 AK309261 BC029800 AF106698 NM_013261	-586383	-	BC029362 NM_001128432 NM_020973 BC070188 BC109377 AK313189 AB017913 AF323990 AK222963 AK292746 BC101829 BC136264 CU688634 AF317840 AJ278964	-1783444	+	AF064846 TSC_hg19_v1_chr4_-_22517635 AY358306 NM_145290 BC035645	-1960482	-	AF279891 TSC_hg19_v1_chr4_-_24586127	108040	-	TSC_hg19_v1_chr4_-_24586154 AK303506 BC035974	108124	-	AB001636 TSC_hg19_v1_chr4_-_24586176	108140	-	AF159714|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF186379|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AB061325|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK296591|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AK309261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029800|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##AF106698|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##NM_013261|PPARGC1A|10891|peroxisome proliferator-activated receptor gamma, coactivator 1 alpha##BC029362|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_001128432|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##NM_020973|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC070188|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC109377|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK313189|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AB017913|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF323990|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK222963|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AK292746|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC101829|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##BC136264|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AF317840|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AJ278964|GBA3|57733|glucosidase, beta, acid 3 (cytosolic)##AY358306|GPR125|166647|G protein-coupled receptor 125##NM_145290|GPR125|166647|G protein-coupled receptor 125##BC035645|GPR125|166647|G protein-coupled receptor 125##AF279891|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AK303506|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##BC035974|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15##AB001636|DHX15|1665|DEAH (Asp-Glu-Ala-His) box polypeptide 15	0.0	
chr5	87979547	87979623	reg1041528.p2	3.625	+	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	-10440	-	BC047059 TSC_hg19_v1_chr5_+_87564842	-414736	+	TSC_hg19_v1_chr5_+_87564773 BC030122	-414829	+	TSC_hg19_v1_chr5_-_87980643 AK125167	1122	-	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	140088	-	TSC_hg19_v1_chr5_-_88179002 AK312472 L08895 AK307883 BC026341	199421	-	AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##BC047059|LOC100505894|100505894|uncharacterized LOC100505894##BC030122|LOC100505894|100505894|uncharacterized LOC100505894##EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C##AK312472|MEF2C|4208|myocyte enhancer factor 2C##L08895|MEF2C|4208|myocyte enhancer factor 2C##AK307883|MEF2C|4208|myocyte enhancer factor 2C##BC026341|MEF2C|4208|myocyte enhancer factor 2C	0.0	
chr5	92221833	92221926	reg1032019.p1	3.625	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-1542747	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-1545717	+	AK091866 TSC_hg19_v1_chr5_-_90610220	-1611634	-	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	695084	-	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	697104	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	698789	+	BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	0.993244	CTCF.p2:-39:0.993
chr6	11382341	11382473	reg1032900.p1	3.625	+	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-149497	-	L43821 TSC_hg19_v1_chr6_-_11232900	-149507	-	U64317 BC020686 TSC_hg19_v1_chr6_-_11232894 BC050740 BC040207	-149516	-	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	133	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	156091	+	NM_001143948 NM_032744	396872	-	NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##L43821|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##U64317|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC020686|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC050740|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BC040207|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105	0.0	
chr7	26190885	26190994	reg1027840.p1	3.625	+	AB040290 AF330057 AF440392 NM_022150	-922859	-	TSC_hg19_v1_chr7_-_25219932 BC060879 NM_138811 BC043269 AK097248	-971068	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	-1025999	-	TSC_hg19_v1_chr7_+_26191817 NM_004289 BC068455 AF133059 AF134891	994	+	TSC_hg19_v1_chr7_-_26232151 BX538099	41212	-	TSC_hg19_v1_chr7_-_26240358 BC000506 M29064 M29065	49402	-	AB040290|NPVF|64111|neuropeptide VF precursor##AF330057|NPVF|64111|neuropeptide VF precursor##AF440392|NPVF|64111|neuropeptide VF precursor##NM_022150|NPVF|64111|neuropeptide VF precursor##BC060879|C7orf31|136895|chromosome 7 open reading frame 31##NM_138811|C7orf31|136895|chromosome 7 open reading frame 31##BC043269|C7orf31|136895|chromosome 7 open reading frame 31##AK097248|C7orf31|136895|chromosome 7 open reading frame 31##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic##NM_004289|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BC068455|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF133059|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##AF134891|NFE2L3|9603|nuclear factor (erythroid-derived 2)-like 3##BX538099|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##BC000506|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29064|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1##M29065|HNRNPA2B1|3181|heterogeneous nuclear ribonucleoprotein A2/B1	0.020395	
chr1	2587030	2587124	reg1037971.p4	3.624	+	AK093058 AX747891 NM_033467 TSC_hg19_v1_chr1_-_2564497	-22612	-	TSC_hg19_v1_chr1_+_2518534 AK094901	-68563	+	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	-68889	+	NM_001242672	119152	-	NM_080431 AK058153 AK314500 BC029499	350978	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	398699	+	AK093058|MMEL1|79258|membrane metallo-endopeptidase-like 1##NM_033467|MMEL1|79258|membrane metallo-endopeptidase-like 1##AK094901|FAM213B|127281|family with sequence similarity 213, member B##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B##NM_001242672|TTC34|100287898|tetratricopeptide repeat domain 34##NM_080431|ACTRT2|140625|actin-related protein T2##AK058153|ACTRT2|140625|actin-related protein T2##AK314500|ACTRT2|140625|actin-related protein T2##BC029499|ACTRT2|140625|actin-related protein T2##NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16	0.041063	
chr13	81626139	81626249	reg1044726.p1	3.624	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-711130	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-713152	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-1570639	+	TSC_hg19_v1_chr13_-_84456424 BC051738	2830231	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	2830306	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	4747245	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.262663	CTCF.p2:20:0.263
chr14	30823349	30823483	reg1038706.p2	3.624	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	-426562	-	TSC_hg19_v1_chr14_+_29241992 BX248251	-1581421	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-1586503	+	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	204944	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	268108	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	268128	+	AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1	0.0	
chr14	87864048	87864167	reg1039702.p1	3.624	+	TSC_hg19_v1_chr14_+_85999692 AK297248	-1864522	+	TSC_hg19_v1_chr14_+_85996515 BC126249 BC130290 BC143936	-1867566	+	TSC_hg19_v1_chr14_+_85996487 AK056649 NM_013231	-1867634	+	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	595356	-	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	595452	-	NM_001201402	595901	-	BC126249|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC130290|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##BC143936|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##AK056649|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##NM_013231|FLRT2|23768|fibronectin leucine rich transmembrane protein 2##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase	0.0	
chr15	31635177	31635299	reg1039225.p1	3.624	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-15900	+	NM_001243538	-112189	-	GQ502181 HM135791 NM_001252020	-181810	-	AJ430383 NM_130901	312303	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	527591	-	TSC_hg19_v1_chr15_-_32162898 AK126002	527705	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.890655	CTCF.p2:18:0.891
chr1	6454003	6454070	reg1028206.p1	3.624	+	BC017365 AK057168 NM_007274	-237	-	BT006888 TSC_hg19_v1_chr1_-_6453439 AB074415 AB074416 D88894 AK289572 AK300831	-625	-	AK290097 AB074417 NM_181864	-8227	-	AB463714 BC132698 BC136963 BC142687 TSC_hg19_v1_chr1_-_6479976 AK091122 NM_019089	25894	-	TSC_hg19_v1_chr1_+_6484835 AL136880 NM_031475	30795	+	U83597 U83598 U75380 U75381 U94512 AB308321 AB590587 HQ258574 U72763 U78029 U94501 U94502 U94503 U94504 U94505 U94506 U94507 U94508 U94509 U94510 TSC_hg19_v1_chr1_-_6526206 AF026070 AF026071 BC117189 BC143886 Y09392 AY358309 NM_001039664 NM_003790 NM_148965 NM_148966 NM_148967 NM_148970 U74611	72166	-	BC017365|ACOT7|11332|acyl-CoA thioesterase 7##AK057168|ACOT7|11332|acyl-CoA thioesterase 7##NM_007274|ACOT7|11332|acyl-CoA thioesterase 7##BT006888|ACOT7|11332|acyl-CoA thioesterase 7##AB074415|ACOT7|11332|acyl-CoA thioesterase 7##AB074416|ACOT7|11332|acyl-CoA thioesterase 7##D88894|ACOT7|11332|acyl-CoA thioesterase 7##AK289572|ACOT7|11332|acyl-CoA thioesterase 7##AK300831|ACOT7|11332|acyl-CoA thioesterase 7##AK290097|ACOT7|11332|acyl-CoA thioesterase 7##AB074417|ACOT7|11332|acyl-CoA thioesterase 7##NM_181864|ACOT7|11332|acyl-CoA thioesterase 7##BC132698|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC136963|HES2|54626|hairy and enhancer of split 2 (Drosophila)##BC142687|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AK091122|HES2|54626|hairy and enhancer of split 2 (Drosophila)##NM_019089|HES2|54626|hairy and enhancer of split 2 (Drosophila)##AL136880|ESPN|83715|espin##NM_031475|ESPN|83715|espin##U83597|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U83598|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75380|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U75381|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94512|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AB308321|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##HQ258574|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U72763|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U78029|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94501|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94502|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94503|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94504|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94505|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94506|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94507|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94508|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94509|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U94510|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026070|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AF026071|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC117189|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##BC143886|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##Y09392|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##AY358309|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_001039664|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_003790|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148965|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148966|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148967|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##NM_148970|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25##U74611|TNFRSF25|8718|tumor necrosis factor receptor superfamily, member 25	0.0	
chr17	14262636	14262758	reg1030127.p1	3.624	+	TSC_hg19_v1_chr17_+_14204397 AK023723 BC063301 AF105377 NM_006041 BC069664 BC069725	-58252	+	NM_001007530 BC146859 BC071823	-122534	-	TSC_hg19_v1_chr17_+_13972841 BC000060 BC006394 U09466 AK294213 AK295925 BT006985 CU674016 DQ893604 DQ895073	-289816	+	CR541931 CR541953 M94048 NM_153322 S61788 TSC_hg19_v1_chr17_-_15164113	901383	-	AK300690 L03203 TSC_hg19_v1_chr17_-_15165834	903122	-	AK290640 TSC_hg19_v1_chr17_-_15165870 BC019040	903168	-	AK023723|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC063301|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##AF105377|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##NM_006041|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC069664|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##BC069725|HS3ST3B1|9953|heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1##NM_001007530|CDRT15|146822|CMT1A duplicated region transcript 15##BC146859|CDRT15|146822|CMT1A duplicated region transcript 15##BC071823|CDRT15|146822|CMT1A duplicated region transcript 15##BC000060|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##BC006394|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##U09466|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK294213|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##AK295925|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##BT006985|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##DQ893604|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##DQ895073|COX10|1352|COX10 homolog, cytochrome c oxidase assembly protein, heme A: farnesyltransferase (yeast)##CR541931|PMP22|5376|peripheral myelin protein 22##CR541953|PMP22|5376|peripheral myelin protein 22##M94048|PMP22|5376|peripheral myelin protein 22##NM_153322|PMP22|5376|peripheral myelin protein 22##S61788|PMP22|5376|peripheral myelin protein 22##AK300690|PMP22|5376|peripheral myelin protein 22##L03203|PMP22|5376|peripheral myelin protein 22##AK290640|PMP22|5376|peripheral myelin protein 22##BC019040|PMP22|5376|peripheral myelin protein 22	0.837329	CTCF.p2:-29:0.837
chr17	55628990	55629078	reg1041850.p1	3.624	+	AK093888 AX748353 NM_170721	-294661	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-295061	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-465891	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	298370	-	AK000746 NM_017949	351715	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	403642	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.0	
chr19	12251301	12251431	reg1002628.p1	3.624	+	AL080125 AK023094 BC036714 TSC_hg19_v1_chr19_-_12251166 NM_001203250 NM_021143	-210	-	AK128700 TSC_hg19_v1_chr19_+_12203111 AK124155	-48253	+	AK299732 AL832297 AK098117 NM_001136501 BC125185 BC125186 TSC_hg19_v1_chr19_+_12175767	-75726	+	BC007868 AK096560 AK292455 NM_145233 TSC_hg19_v1_chr19_-_12267555	16180	-	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	22543	+	AK023304 TSC_hg19_v1_chr19_+_12305836	54467	+	AL080125|ZNF20|7568|zinc finger protein 20##AK023094|ZNF20|7568|zinc finger protein 20##BC036714|ZNF20|7568|zinc finger protein 20##NM_001203250|ZNF20|7568|zinc finger protein 20##NM_021143|ZNF20|7568|zinc finger protein 20##AK128700|ZNF788|388507|zinc finger family member 788##AK299732|ZNF844|284391|zinc finger protein 844##AL832297|ZNF844|284391|zinc finger protein 844##AK098117|ZNF844|284391|zinc finger protein 844##NM_001136501|ZNF844|284391|zinc finger protein 844##BC125185|ZNF844|284391|zinc finger protein 844##BC125186|ZNF844|284391|zinc finger protein 844##BC007868|ZNF625|90589|zinc finger protein 625##AK096560|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##AK292455|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##NM_145233|ZNF625|90589|zinc finger protein 625##NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136##AK023304|LOC100289333|100289333|uncharacterized LOC100289333	0.0	
chr19	39889309	39889489	reg1000506.p4	3.624	+	TSC_hg19_v1_chr19_+_39882046 AL137304 AK000411 AK298014 BC019015 AK092909 AX747802 AK124629 AK316010 AK090877 AK297772 AX746660 AK294667	-7361	+	AK300563 TSC_hg19_v1_chr19_+_39882017 AY729650 NM_017592 AB528726	-7416	+	AK098423 AJ401156 BC000017 NM_019088 TSC_hg19_v1_chr19_-_39881747 AK001985 BC013402 AK294625	-7705	-	TSC_hg19_v1_chr19_+_39897486 AK314042 M92843 NM_003407 BC009693 M63625 EU446714 EU832179 EU832272 CU679443	8375	+	TSC_hg19_v1_chr19_+_39899749 AJ227917	10394	+	AK024429 NM_022835	14350	+	AL137304|MED29|55588|mediator complex subunit 29##AK000411|MED29|55588|mediator complex subunit 29##AK298014|MED29|55588|mediator complex subunit 29##BC019015|MED29|55588|mediator complex subunit 29##AK092909|MED29|55588|mediator complex subunit 29##AK124629|MED29|55588|mediator complex subunit 29##AK316010|MED29|55588|mediator complex subunit 29##AK090877|MED29|55588|mediator complex subunit 29##AK297772|MED29|55588|mediator complex subunit 29##AK294667|MED29|55588|mediator complex subunit 29##AK300563|MED29|55588|mediator complex subunit 29##AY729650|MED29|55588|mediator complex subunit 29##NM_017592|MED29|55588|mediator complex subunit 29##AK098423|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AJ401156|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##BC000017|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##NM_019088|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK001985|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##BC013402|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK294625|PAF1|54623|Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)##AK314042|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##M92843|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##NM_003407|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##BC009693|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##M63625|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU446714|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU832179|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##EU832272|ZFP36|7538|zinc finger protein 36, C3H type, homolog (mouse)##AK024429|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2##NM_022835|PLEKHG2|64857|pleckstrin homology domain containing, family G (with RhoGef domain) member 2	0.0	
chr2	176944688	176944831	reg1031190.p2	3.624	+	TSC_hg19_v1_chr2_-_176866988 AB051502 AK056532 BC110329 BC105132 BC105134 BC143681 BC143683 AK302833 BC064661 NM_030650 CR936742	-77784	-	CR407601 EU832770 GQ129314 BC106881 U09813 NM_001002258 TSC_hg19_v1_chr2_-_176046438 AK311999 NM_001190329 NM_001689	-898455	-	TSC_hg19_v1_chr2_-_176032932 BC026175 BC107698 DQ003036 DQ003037 DQ003038 DQ003039 DQ003040 DQ003041 DQ003042 DQ003043 DQ003044 DQ003045 DQ003046 DQ003047 DQ003048 DQ003049 NM_001880 AK128731 BX648469	-911864	-	NM_001080458	3930	-	TSC_hg19_v1_chr2_+_176957451 NM_000523 AB463753	12785	+	BC069088 BC121103 BC121104 NM_021193	19770	+	AB051502|KIAA1715|80856|KIAA1715##AK056532|KIAA1715|80856|KIAA1715##BC110329|KIAA1715|80856|KIAA1715##BC105132|KIAA1715|80856|KIAA1715##BC105134|KIAA1715|80856|KIAA1715##BC143681|KIAA1715|80856|KIAA1715##BC143683|KIAA1715|80856|KIAA1715##AK302833|KIAA1715|80856|KIAA1715##BC064661|KIAA1715|80856|KIAA1715##NM_030650|KIAA1715|80856|KIAA1715##CR936742|KIAA1715|80856|KIAA1715##CR407601|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##EU832770|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##GQ129314|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC106881|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##U09813|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001002258|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##AK311999|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001190329|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##NM_001689|ATP5G3|518|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)##BC026175|ATF2|1386|activating transcription factor 2##BC107698|ATF2|1386|activating transcription factor 2##DQ003036|ATF2|1386|activating transcription factor 2##DQ003037|ATF2|1386|activating transcription factor 2##DQ003038|ATF2|1386|activating transcription factor 2##DQ003039|ATF2|1386|activating transcription factor 2##DQ003040|ATF2|1386|activating transcription factor 2##DQ003041|ATF2|1386|activating transcription factor 2##DQ003042|ATF2|1386|activating transcription factor 2##DQ003043|ATF2|1386|activating transcription factor 2##DQ003044|ATF2|1386|activating transcription factor 2##DQ003045|ATF2|1386|activating transcription factor 2##DQ003046|ATF2|1386|activating transcription factor 2##DQ003047|ATF2|1386|activating transcription factor 2##DQ003048|ATF2|1386|activating transcription factor 2##DQ003049|ATF2|1386|activating transcription factor 2##NM_001880|ATF2|1386|activating transcription factor 2##AK128731|ATF2|1386|activating transcription factor 2##BX648469|ATF2|1386|activating transcription factor 2##NM_001080458|EVX2|344191|even-skipped homeobox 2##NM_000523|HOXD13|3239|homeobox D13##BC069088|HOXD12|3238|homeobox D12##BC121103|HOXD12|3238|homeobox D12##BC121104|HOXD12|3238|homeobox D12##NM_021193|HOXD12|3238|homeobox D12	1.446822	CTCF.p2:-33:0.997	CTCF.p2:58:0.450
chr2	197107051	197107195	reg1031428.p1	3.624	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-70805	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-70844	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-173628	-	BC117194 BC117198 AB037722 NM_020760	350169	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	397234	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	557290	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.0	
chr2	231658718	231658883	reg1035590.p1	3.624	+	AK292382 NM_001130849 NM_001130850 AK315692	-80522	+	TSC_hg19_v1_chr2_+_231577633 BC020570	-81156	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	-81254	+	TSC_hg19_v1_chr2_+_231729608 NM_001012514 NM_001012516 NM_030926	70760	+	TSC_hg19_v1_chr2_+_231729626 AF271781 AF272043	70829	+	TSC_hg19_v1_chr2_+_231729653 AK075361 AK090975 AK303199 AX746713	70845	+	AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##NM_016289|CAB39|51719|calcium binding protein 39##NM_001012514|ITM2C|81618|integral membrane protein 2C##NM_001012516|ITM2C|81618|integral membrane protein 2C##NM_030926|ITM2C|81618|integral membrane protein 2C##AF271781|ITM2C|81618|integral membrane protein 2C##AF272043|ITM2C|81618|integral membrane protein 2C##AK075361|ITM2C|81618|integral membrane protein 2C##AK090975|ITM2C|81618|integral membrane protein 2C##AK303199|ITM2C|81618|integral membrane protein 2C	0.0	
chr2	42124713	42124786	reg1033713.p2	3.624	+	Y12878 Y12885 AK291696 BX537482 NM_001112802	-1385177	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	-1445527	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-1467318	-	AK124893 NM_001242815	56193	-	TSC_hg19_v1_chr2_+_42275160 NM_138370	150383	+	AB528999 TSC_hg19_v1_chr2_+_42275979	151212	+	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)	0.0	
chr3	78968358	78968445	reg1033924.p1	3.624	+	TSC_hg19_v1_chr3_-_78666943 AK025535	-301416	-	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-1879121	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-3133699	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	100186	-	NM_002941	848657	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	2842296	-	AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK123776|ZNF717|100131827|zinc finger protein 717##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.0	
chr4	9002168	9002270	reg1014621.p1	3.624	+	NM_001040071	-50743	+	AB593128 M99587 NM_018942	-128722	-	U83411 TSC_hg19_v1_chr4_+_8594521	-407696	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	214910	+	BC100993 AF544011 AF544012 AY509884 BC100991 NM_001105662	243384	+	BC100993 AF544011 AF544012 AY188990 AY509884 BC100991 BC100992 NM_001105662	257629	+	NM_001040071|LOC650293|650293|seven transmembrane helix receptor##M99587|HMX1|3166|H6 family homeobox 1##NM_018942|HMX1|3166|H6 family homeobox 1##U83411|CPZ|8532|carboxypeptidase Z##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17##BC100993|USP17|391627|ubiquitin specific peptidase 17##AF544011|USP17|391627|ubiquitin specific peptidase 17##AF544012|USP17|391627|ubiquitin specific peptidase 17##AY188990|USP17|391627|ubiquitin specific peptidase 17##AY509884|USP17L2|377630|ubiquitin specific peptidase 17-like 2##BC100991|USP17|391627|ubiquitin specific peptidase 17##BC100992|USP17|391627|ubiquitin specific peptidase 17##NM_001105662|USP17|391627|ubiquitin specific peptidase 17	0.0	
chr5	176784736	176784874	reg1037485.p1	3.624	+	TSC_hg19_v1_chr5_-_176778684 AK308027 NM_006816	-6022	-	TSC_hg19_v1_chr5_-_176778666 AK292099 BC017263	-6140	-	TSC_hg19_v1_chr5_-_176778656 AK301607	-6149	-	AK123382 NM_006480 TSC_hg19_v1_chr5_+_176784882 BC014094	77	+	TSC_hg19_v1_chr5_+_176784947 AB590533	180	+	TSC_hg19_v1_chr5_+_176794314 AK098150	9508	+	AK308027|LMAN2|10960|lectin, mannose-binding 2##NM_006816|LMAN2|10960|lectin, mannose-binding 2##AK292099|LMAN2|10960|lectin, mannose-binding 2##BC017263|LMAN2|10960|lectin, mannose-binding 2##AK301607|LMAN2|10960|lectin, mannose-binding 2##AK123382|RGS14|10636|regulator of G-protein signaling 14##NM_006480|RGS14|10636|regulator of G-protein signaling 14##BC014094|RGS14|10636|regulator of G-protein signaling 14##AK098150|RGS14|10636|regulator of G-protein signaling 14	0.0	
chr6	139592330	139592450	reg1041198.p1	3.624	+	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	-136134	+	TSC_hg19_v1_chr6_+_139349935 AK309402 AF116682 BC014953	-242472	+	NM_021243 AF161398 TSC_hg19_v1_chr6_+_139349850	-242553	+	TSC_hg19_v1_chr6_-_139613136 BX647633 AL834248 AL831988 AK314725 BX647477 BC115383 BC115384 AB085905 NM_153235	20770	-	NM_001168389 NM_001168388	103033	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	103371	-	BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)##AF116682|C6orf115|58527|chromosome 6 open reading frame 115##BC014953|C6orf115|58527|chromosome 6 open reading frame 115##NM_021243|C6orf115|58527|chromosome 6 open reading frame 115##AF161398|C6orf115|58527|chromosome 6 open reading frame 115##BX647633|TXLNB|167838|taxilin beta##AL834248|TXLNB|167838|taxilin beta##AL831988|TXLNB|167838|taxilin beta##AK314725|TXLNB|167838|taxilin beta##BX647477|TXLNB|167838|taxilin beta##BC115383|TXLNB|167838|taxilin beta##BC115384|TXLNB|167838|taxilin beta##AB085905|TXLNB|167838|taxilin beta##NM_153235|TXLNB|167838|taxilin beta##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	0.0	
chr6	157247532	157247608	reg1036792.p2	3.624	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-147695	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-148286	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-148345	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	497014	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	497647	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	554969	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	0.0	
chr6	35592313	35592395	reg1037592.p2	3.624	+	CU689498 EU446712 BC065261 NM_003322 BC032714 BC001761 BC021268 AB593124 AB593123 DQ426893	-111680	-	BC010053 BC027877 BC091488 AF142482 TSC_hg19_v1_chr6_-_35464854 NM_003214	-127542	-	AB082926 BC006791 U12404 TSC_hg19_v1_chr6_+_35436204 BC011366	-156151	+	TSC_hg19_v1_chr6_-_35656616 HM245391 AB209893	64266	-	TSC_hg19_v1_chr6_-_35656693 BC111050 AK222807 AK302704 AK303356 AK312422 BX647390 NM_001145776 AF194172 U71321 NM_001145777 NM_004117	64352	-	BC042605 NM_001145775	104005	-	EU446712|TULP1|7287|tubby like protein 1##BC065261|TULP1|7287|tubby like protein 1##NM_003322|TULP1|7287|tubby like protein 1##BC032714|TULP1|7287|tubby like protein 1##AB593124|TULP1|7287|tubby like protein 1##AB593123|TULP1|7287|tubby like protein 1##DQ426893|TULP1|7287|tubby like protein 1##BC010053|TEAD3|7005|TEA domain family member 3##BC027877|TEAD3|7005|TEA domain family member 3##BC091488|TEAD3|7005|TEA domain family member 3##AF142482|TEAD3|7005|TEA domain family member 3##NM_003214|TEAD3|7005|TEA domain family member 3##AB082926|RPL10A|4736|ribosomal protein L10a##BC006791|RPL10A|4736|ribosomal protein L10a##U12404|RPL10A|4736|ribosomal protein L10a##BC011366|RPL10A|4736|ribosomal protein L10a##HM245391|FKBP5|2289|FK506 binding protein 5##AB209893|FKBP5|2289|FK506 binding protein 5##BC111050|FKBP5|2289|FK506 binding protein 5##AK222807|FKBP5|2289|FK506 binding protein 5##AK302704|FKBP5|2289|FK506 binding protein 5##AK303356|FKBP5|2289|FK506 binding protein 5##AK312422|FKBP5|2289|FK506 binding protein 5##BX647390|FKBP5|2289|FK506 binding protein 5##NM_001145776|FKBP5|2289|FK506 binding protein 5##AF194172|FKBP5|2289|FK506 binding protein 5##U71321|FKBP5|2289|FK506 binding protein 5##NM_001145777|FKBP5|2289|FK506 binding protein 5##NM_004117|FKBP5|2289|FK506 binding protein 5##BC042605|FKBP5|2289|FK506 binding protein 5##NM_001145775|FKBP5|2289|FK506 binding protein 5	0.113079	
chr8	30046119	30046221	reg1034110.p2	3.624	+	D84145 NM_006571 TSC_hg19_v1_chr8_+_30013882 AK314128 BC013175 CR456851	-32315	+	NM_001100916 EU518495	-43970	-	TSC_hg19_v1_chr8_+_29952989 AK075363 AF161461 DQ891897 DQ895083 CR541735 CR541760	-93171	+	Z36874 TSC_hg19_v1_chr8_+_30209759	163567	+	NM_001008710 NM_001008711 NM_001008712 NM_006867 AK304858 D84107 D84108 D84109 D84110 TSC_hg19_v1_chr8_+_30242056 BC003608	195839	+	NM_001206847	449946	+	D84145|DCTN6|10671|dynactin 6##NM_006571|DCTN6|10671|dynactin 6##AK314128|DCTN6|10671|dynactin 6##BC013175|DCTN6|10671|dynactin 6##CR456851|DCTN6|10671|dynactin 6##NM_001100916|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##EU518495|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing##NM_006867|RBPMS|11030|RNA binding protein with multiple splicing##AK304858|RBPMS|11030|RNA binding protein with multiple splicing##D84107|RBPMS|11030|RNA binding protein with multiple splicing##D84108|RBPMS|11030|RNA binding protein with multiple splicing##D84109|RBPMS|11030|RNA binding protein with multiple splicing##D84110|RBPMS|11030|RNA binding protein with multiple splicing##BC003608|RBPMS|11030|RNA binding protein with multiple splicing##NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341	0.992363	CTCF.p2:-7:0.992
chr10	45470333	45470423	reg1004759.p1	3.623	+	TSC_hg19_v1_chr10_+_45455249 AY216713 AY216714 AY216715 AY216716 NM_032023 BC032593 AF260335 AK311531	-15146	+	AK056518 TSC_hg19_v1_chr10_-_45455156	-15231	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	-63660	+	BC011402 AB025244 TSC_hg19_v1_chr10_-_45474258 AK002191 AK098476 AL136653 AB022718 AK300839 AK312496 NM_007021	3891	-	NM_006963 AK291508 AK312278 BC053687 BC010642	25949	+	TSC_hg19_v1_chr10_-_45496265 AK311351 HQ258049 BC062568 BC130369 BC130395 AK055129 NM_001039380	25986	-	AY216713|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216714|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216715|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AY216716|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##NM_032023|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##BC032593|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AF260335|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AK311531|RASSF4|83937|Ras association (RalGDS/AF-6) domain family member 4##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##BC011402|C10orf10|11067|chromosome 10 open reading frame 10##AB025244|C10orf10|11067|chromosome 10 open reading frame 10##AK002191|C10orf10|11067|chromosome 10 open reading frame 10##AK098476|C10orf10|11067|chromosome 10 open reading frame 10##AL136653|C10orf10|11067|chromosome 10 open reading frame 10##AB022718|C10orf10|11067|chromosome 10 open reading frame 10##AK300839|C10orf10|11067|chromosome 10 open reading frame 10##AK312496|C10orf10|11067|chromosome 10 open reading frame 10##NM_007021|C10orf10|11067|chromosome 10 open reading frame 10##NM_006963|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK291508|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK312278|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC053687|ZNF22|7570|zinc finger protein 22 (KOX 15)##BC010642|ZNF22|7570|zinc finger protein 22 (KOX 15)##AK311351|C10orf25|220979|chromosome 10 open reading frame 25##HQ258049|C10orf25|220979|chromosome 10 open reading frame 25##BC062568|C10orf25|220979|chromosome 10 open reading frame 25##BC130369|C10orf25|220979|chromosome 10 open reading frame 25##BC130395|C10orf25|220979|chromosome 10 open reading frame 25##AK055129|C10orf25|220979|chromosome 10 open reading frame 25##NM_001039380|C10orf25|220979|chromosome 10 open reading frame 25	0.0	
chr1	109289074	109289171	reg1034279.p1	3.623	+	NM_001144937	-33567	+	TSC_hg19_v1_chr1_+_109242188 AY211915	-46927	+	TSC_hg19_v1_chr1_+_109234948 NM_018061 BC040127 BC053838 BC034581 BC007757 BC024275 BC009453 BC016296 AL833950 AK001192 BC130346 BC132963 BC144243 BC107801 CU691032	-54062	+	TSC_hg19_v1_chr1_+_109289278 NM_007269	153	+	TSC_hg19_v1_chr1_+_109289295 AK290134 AK223170 AK291322 AK312910 D63506 BC047764 BC028028	185	+	BC038099 TSC_hg19_v1_chr1_+_109289347	225	+	NM_001144937|FNDC7|163479|fibronectin type III domain containing 7##AY211915|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##NM_018061|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC040127|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC053838|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC034581|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC007757|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC024275|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC009453|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC016296|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##AL833950|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##AK001192|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC130346|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC132963|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC144243|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##BC107801|PRPF38B|55119|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B##NM_007269|STXBP3|6814|syntaxin binding protein 3##AK290134|STXBP3|6814|syntaxin binding protein 3##AK223170|STXBP3|6814|syntaxin binding protein 3##AK291322|STXBP3|6814|syntaxin binding protein 3##AK312910|STXBP3|6814|syntaxin binding protein 3##D63506|STXBP3|6814|syntaxin binding protein 3##BC047764|STXBP3|6814|syntaxin binding protein 3##BC028028|STXBP3|6814|syntaxin binding protein 3##BC038099|STXBP3|6814|syntaxin binding protein 3	0.343566	CTCF.p2:9:0.244
chr11	47370545	47370636	reg1028201.p1	3.623	+	TSC_hg19_v1_chr11_+_47291683 NM_001135943 NM_130475 NM_130476 BC040484 AB002356 U44953	-78872	+	TSC_hg19_v1_chr11_+_47291234 NM_001135944 NM_003682 NM_130471 NM_130472 NM_130473 NM_130474 AF440100 AF440101 AF440102 AF440103 AF440434 AK292442	-79377	+	TSC_hg19_v1_chr11_+_47290926 NM_130470 U77352	-79650	+	BC136543 BC136546 X84075 BC142685 BC151211 AK291569 AK297843 EF560722 EU747718 EU747719 NM_000256 TSC_hg19_v1_chr11_-_47374254	3647	-	AB464244 TSC_hg19_v1_chr11_-_47399956	29352	-	TSC_hg19_v1_chr11_-_47400039 AK310065	29425	-	NM_001135943|MADD|8567|MAP-kinase activating death domain##NM_130475|MADD|8567|MAP-kinase activating death domain##NM_130476|MADD|8567|MAP-kinase activating death domain##BC040484|MADD|8567|MAP-kinase activating death domain##AB002356|MADD|8567|MAP-kinase activating death domain##U44953|MADD|8567|MAP-kinase activating death domain##NM_001135944|MADD|8567|MAP-kinase activating death domain##NM_003682|MADD|8567|MAP-kinase activating death domain##NM_130471|MADD|8567|MAP-kinase activating death domain##NM_130472|MADD|8567|MAP-kinase activating death domain##NM_130473|MADD|8567|MAP-kinase activating death domain##NM_130474|MADD|8567|MAP-kinase activating death domain##AF440100|MADD|8567|MAP-kinase activating death domain##AF440101|MADD|8567|MAP-kinase activating death domain##AF440102|MADD|8567|MAP-kinase activating death domain##AF440103|MADD|8567|MAP-kinase activating death domain##AF440434|MADD|8567|MAP-kinase activating death domain##AK292442|MADD|8567|MAP-kinase activating death domain##NM_130470|MADD|8567|MAP-kinase activating death domain##U77352|MADD|8567|MAP-kinase activating death domain##BC136543|MYBPC3|4607|myosin binding protein C, cardiac##BC136546|MYBPC3|4607|myosin binding protein C, cardiac##X84075|MYBPC3|4607|myosin binding protein C, cardiac##BC142685|MYBPC3|4607|myosin binding protein C, cardiac##BC151211|MYBPC3|4607|myosin binding protein C, cardiac##AK291569|MYBPC3|4607|myosin binding protein C, cardiac##AK297843|MYBPC3|4607|myosin binding protein C, cardiac##EF560722|MYBPC3|4607|myosin binding protein C, cardiac##EU747718|MYBPC3|4607|myosin binding protein C, cardiac##EU747719|MYBPC3|4607|myosin binding protein C, cardiac##NM_000256|MYBPC3|4607|myosin binding protein C, cardiac##AK310065|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1	0.993448	CTCF.p2:6:0.993
chr1	168291271	168291395	reg1038496.p1	3.623	+	AJ010277 NM_005149 BC093664 BC093666 EU446671	-41031	+	TSC_hg19_v1_chr1_+_168195262 BC068098 CU686619	-96040	+	TSC_hg19_v1_chr1_+_168195254 AK290325 NM_199344	-96082	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	221884	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	254459	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	407096	-	AJ010277|TBX19|9095|T-box 19##NM_005149|TBX19|9095|T-box 19##BC093664|TBX19|9095|T-box 19##BC093666|TBX19|9095|T-box 19##EU446671|TBX19|9095|T-box 19##BC068098|SFT2D2|375035|SFT2 domain containing 2##AK290325|SFT2D2|375035|SFT2 domain containing 2##NM_199344|SFT2D2|375035|SFT2 domain containing 2##BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin	0.910054	CTCF.p2:3:0.910
chr11	85925885	85926010	reg1035554.p1	3.623	+	AK300275 NM_001206947	-145037	-	TSC_hg19_v1_chr11_-_85780127 AB210017 NM_001008660 NM_001206946 NM_007166 AK291414	-145823	-	TSC_hg19_v1_chr11_-_85780088 BC064357	-145852	-	TSC_hg19_v1_chr11_+_85955830 NM_003797 NM_152991 AK292120 AF080227	29912	+	AF070418 TSC_hg19_v1_chr11_+_85956058	30102	+	AF099032 U90651 TSC_hg19_v1_chr11_+_85956254	30270	+	AK300275|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206947|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AB210017|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001008660|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_001206946|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_007166|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##AK291414|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##BC064357|PICALM|8301|phosphatidylinositol binding clathrin assembly protein##NM_003797|EED|8726|embryonic ectoderm development##NM_152991|EED|8726|embryonic ectoderm development##AK292120|EED|8726|embryonic ectoderm development##AF080227|EED|8726|embryonic ectoderm development##AF070418|EED|8726|embryonic ectoderm development##AF099032|EED|8726|embryonic ectoderm development##U90651|EED|8726|embryonic ectoderm development	0.0	
chr12	49297820	49297927	reg1037911.p2	3.623	+	AF498967 Y07923 AB464152 AB040147 AK292762 BC026356 NM_014470	-38273	-	AF026402 BC002366 TSC_hg19_v1_chr12_-_49245925 AK294877 AK312379 AK128428 AK292921 NM_004818	-51941	-	NM_000725 NM_001206915 TSC_hg19_v1_chr12_+_49212307	-85590	+	NM_033124 AK302082 AK093051 AX747886 AF382188 AK314623 BC039317	49	+	NM_001143781	20790	-	DQ892057 DQ895251 AF238079 BC027973 AY358998 BC048292 AK301455 TSC_hg19_v1_chr12_-_49319304 NM_001143782 NM_016594	21397	-	AF498967|RND1|27289|Rho family GTPase 1##Y07923|RND1|27289|Rho family GTPase 1##AB040147|RND1|27289|Rho family GTPase 1##AK292762|RND1|27289|Rho family GTPase 1##BC026356|RND1|27289|Rho family GTPase 1##NM_014470|RND1|27289|Rho family GTPase 1##AF026402|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##BC002366|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK294877|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK312379|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK128428|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK292921|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##NM_004818|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_001206915|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_033124|CCDC65|85478|coiled-coil domain containing 65##AK302082|CCDC65|85478|coiled-coil domain containing 65##AK093051|CCDC65|85478|coiled-coil domain containing 65##AF382188|CCDC65|85478|coiled-coil domain containing 65##AK314623|CCDC65|85478|coiled-coil domain containing 65##BC039317|CCDC65|85478|coiled-coil domain containing 65##NM_001143781|FKBP11|51303|FK506 binding protein 11, 19 kDa##DQ892057|FKBP11|51303|FK506 binding protein 11, 19 kDa##DQ895251|FKBP11|51303|FK506 binding protein 11, 19 kDa##AF238079|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC027973|FKBP11|51303|FK506 binding protein 11, 19 kDa##AY358998|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC048292|FKBP11|51303|FK506 binding protein 11, 19 kDa##AK301455|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_001143782|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_016594|FKBP11|51303|FK506 binding protein 11, 19 kDa	0.0	
chr13	33724841	33724930	reg1035132.p1	3.623	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-134362	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-564202	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-564246	+	AY082590 BC046563 NM_001243466 NM_178007	35330	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	55279	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	134982	-	AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr1	3774086	3774267	reg1014959.p2	3.623	+	BC048797 NM_004402	-332	+	TSC_hg19_v1_chr1_-_3773776 BC001640 BC047450 BC026020 BC050721 NM_014704	-392	-	TSC_hg19_v1_chr1_-_3773757 AB011134 AK308191	-488	-	TSC_hg19_v1_chr1_-_3816816 CU688284 BC035643 BC047611	42587	-	TSC_hg19_v1_chr1_-_3816823 BC067302 AK125092 AK289493 NM_207356	42669	-	TSC_hg19_v1_chr1_+_4714668 AF175409	940553	+	BC048797|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)##NM_004402|DFFB|1677|DNA fragmentation factor, 40kDa, beta polypeptide (caspase-activated DNase)##BC001640|CEP104|9731|centrosomal protein 104kDa##BC047450|CEP104|9731|centrosomal protein 104kDa##BC026020|CEP104|9731|centrosomal protein 104kDa##BC050721|CEP104|9731|centrosomal protein 104kDa##NM_014704|CEP104|9731|centrosomal protein 104kDa##AB011134|CEP104|9731|centrosomal protein 104kDa##AK308191|CEP104|9731|centrosomal protein 104kDa##BC035643|C1orf174|339448|chromosome 1 open reading frame 174##BC047611|C1orf174|339448|chromosome 1 open reading frame 174##BC067302|C1orf174|339448|chromosome 1 open reading frame 174##AK125092|C1orf174|339448|chromosome 1 open reading frame 174##AK289493|C1orf174|339448|chromosome 1 open reading frame 174##NM_207356|C1orf174|339448|chromosome 1 open reading frame 174##AF175409|AJAP1|55966|adherens junctions associated protein 1	0.139438	
chr13	91384481	91384567	reg1040767.p1	3.623	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-3059655	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-5011085	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-6928024	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	666380	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	2494903	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	3747302	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.167646	
chr18	8450038	8450146	reg1039771.p1	3.623	+	TSC_hg19_v1_chr18_+_7946885 AK294492	-503186	+	NM_001105244 NM_002845 TSC_hg19_v1_chr18_+_7567321	-882775	+	NM_001105581	-1218956	+	TSC_hg19_v1_chr18_+_8609434 BC071600 BC098407 BC050338 NM_001025300	159344	+	TSC_hg19_v1_chr18_+_8609684 AB590062 AX721075	159654	+	AK131528 NM_015210	267276	+	AK294492|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_001105244|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_002845|PTPRM|5797|protein tyrosine phosphatase, receptor type, M##NM_001105581|LRRC30|339291|leucine rich repeat containing 30##BC071600|RAB12|201475|RAB12, member RAS oncogene family##BC098407|RAB12|201475|RAB12, member RAS oncogene family##BC050338|RAB12|201475|RAB12, member RAS oncogene family##NM_001025300|RAB12|201475|RAB12, member RAS oncogene family##AK131528|CCDC165|23255|coiled-coil domain containing 165##NM_015210|CCDC165|23255|coiled-coil domain containing 165	0.0	
chr20	49609682	49609798	reg1038092.p1	3.623	+	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-34372	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-34677	-	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	-62017	-	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	29917	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	549399	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	549535	-	BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.965122	CTCF.p2:-21:0.965
chr2	228443542	228443666	reg1038646.p2	3.623	+	TSC_hg19_v1_chr2_+_228356287 AK295030	-87313	+	TSC_hg19_v1_chr2_+_228336877 NM_001135187 NM_001135188 NM_001135189 NM_004504 BC030592 X89478 BC096272 BC096273 BC096274 BC096275 AB527534 CU688928	-106598	+	TSC_hg19_v1_chr2_+_228336861 AK097451	-106762	+	AM393148 AM393273 BC131618 AL359944 CR749679 AK055355 NM_001162483 NM_020161	54314	-	AF271633 BC032014 AK301490 AF283317 AK312464 NM_025243	139117	-	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	234987	+	AK295030|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135187|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135188|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135189|AGFG1|3267|ArfGAP with FG repeats 1##NM_004504|AGFG1|3267|ArfGAP with FG repeats 1##BC030592|AGFG1|3267|ArfGAP with FG repeats 1##X89478|AGFG1|3267|ArfGAP with FG repeats 1##BC096272|AGFG1|3267|ArfGAP with FG repeats 1##BC096273|AGFG1|3267|ArfGAP with FG repeats 1##BC096274|AGFG1|3267|ArfGAP with FG repeats 1##BC096275|AGFG1|3267|ArfGAP with FG repeats 1##AK097451|AGFG1|3267|ArfGAP with FG repeats 1##AM393148|C2orf83|56918|chromosome 2 open reading frame 83##AM393273|C2orf83|56918|chromosome 2 open reading frame 83##BC131618|C2orf83|56918|chromosome 2 open reading frame 83##AL359944|C2orf83|56918|chromosome 2 open reading frame 83##CR749679|C2orf83|56918|chromosome 2 open reading frame 83##AK055355|C2orf83|56918|chromosome 2 open reading frame 83##NM_001162483|C2orf83|56918|chromosome 2 open reading frame 83##NM_020161|C2orf83|56918|chromosome 2 open reading frame 83##AF271633|SLC19A3|80704|solute carrier family 19, member 3##BC032014|SLC19A3|80704|solute carrier family 19, member 3##AK301490|SLC19A3|80704|solute carrier family 19, member 3##AF283317|SLC19A3|80704|solute carrier family 19, member 3##AK312464|SLC19A3|80704|solute carrier family 19, member 3##NM_025243|SLC19A3|80704|solute carrier family 19, member 3##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20	0.990785	CTCF.p2:-1:0.991
chr2	33701390	33701551	reg1023907.p2	3.623	+	NM_001139488	-150	+	AK125551 TSC_hg19_v1_chr2_+_33661417 BC027849 NM_170672 AK292983	-40022	+	TSC_hg19_v1_chr2_+_33359657 NM_000627 NM_001166264 NM_001166265 NM_001166266 AB208801 BC130289 BC144127 BC144128 M34057 AB384737 AF489528	-341765	+	TSC_hg19_v1_chr2_+_33701715 BX647990	226	+	AB020653 NM_015376	37471	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	122875	-	NM_001139488|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK125551|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC027849|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_170672|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK292983|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_000627|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166264|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166265|LTBP1|4052|latent transforming growth factor beta binding protein 1##NM_001166266|LTBP1|4052|latent transforming growth factor beta binding protein 1##AB208801|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC130289|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144127|LTBP1|4052|latent transforming growth factor beta binding protein 1##BC144128|LTBP1|4052|latent transforming growth factor beta binding protein 1##M34057|LTBP1|4052|latent transforming growth factor beta binding protein 1##AF489528|LTBP1|4052|latent transforming growth factor beta binding protein 1##BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A	0.0	
chr3	139239047	139239133	reg1030469.p1	3.623	+	BC069296 BC069361 BC069396 BC069424 BC069447 BC069469 BC069513 BC069522 U13831 CU686882 AB527682 NM_004164 AK291978	-43762	-	TSC_hg19_v1_chr3_-_139108523 AK302943 NM_004766	-130571	-	TSC_hg19_v1_chr3_-_139108486 AK128561	-130593	-	AB464149 CR541979 CR542005 EU831403 EU831495 BC121052 M36809 TSC_hg19_v1_chr3_-_139258472	19332	-	AK290315 AK307378 TSC_hg19_v1_chr3_-_139258479 M11433	19393	-	TSC_hg19_v1_chr3_-_139258531 AK301684 AK309492 NM_001130992 NM_001130993 NM_002899	19510	-	BC069296|RBP2|5948|retinol binding protein 2, cellular##BC069361|RBP2|5948|retinol binding protein 2, cellular##BC069396|RBP2|5948|retinol binding protein 2, cellular##BC069424|RBP2|5948|retinol binding protein 2, cellular##BC069447|RBP2|5948|retinol binding protein 2, cellular##BC069469|RBP2|5948|retinol binding protein 2, cellular##BC069513|RBP2|5948|retinol binding protein 2, cellular##BC069522|RBP2|5948|retinol binding protein 2, cellular##U13831|RBP2|5948|retinol binding protein 2, cellular##NM_004164|RBP2|5948|retinol binding protein 2, cellular##AK291978|RBP2|5948|retinol binding protein 2, cellular##AK302943|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##NM_004766|COPB2|9276|coatomer protein complex, subunit beta 2 (beta prime)##CR541979|RBP1|5947|retinol binding protein 1, cellular##CR542005|RBP1|5947|retinol binding protein 1, cellular##EU831403|RBP1|5947|retinol binding protein 1, cellular##EU831495|RBP1|5947|retinol binding protein 1, cellular##BC121052|RBP1|5947|retinol binding protein 1, cellular##M36809|RBP1|5947|retinol binding protein 1, cellular##AK290315|RBP1|5947|retinol binding protein 1, cellular##M11433|RBP1|5947|retinol binding protein 1, cellular##AK309492|RBP1|5947|retinol binding protein 1, cellular##NM_001130992|RBP1|5947|retinol binding protein 1, cellular##NM_001130993|RBP1|5947|retinol binding protein 1, cellular##NM_002899|RBP1|5947|retinol binding protein 1, cellular	0.991579	CTCF.p2:12:0.992
chr3	15546646	15546759	reg1036948.p2	3.623	+	AK128401 NM_080538	-6324	-	TSC_hg19_v1_chr3_+_15469073 NM_033083 AK312330 AK304697 BC041329 AF272973 CU691982	-77534	+	TSC_hg19_v1_chr3_-_15469037 BC022400 AK057791 NM_152396 AK293370	-77684	-	BC126363 BC144004 BC074828 BC074829 TSC_hg19_v1_chr3_-_15563197 AY150334 AY150335 AY150336 AY150337 AY150338 AY150339 AJ225895 AF057036 NM_005677 NM_080539 AK289688	16516	-	DQ895558 EU176367 AF161397 TSC_hg19_v1_chr3_-_15643040	96302	-	BC007440 TSC_hg19_v1_chr3_-_15643077 AJ131753 AK056977 AK299287 AK301546 AK302086 BC001627 AK301990 NM_012260	96394	-	AK128401|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080538|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_033083|EAF1|85403|ELL associated factor 1##AK312330|EAF1|85403|ELL associated factor 1##AK304697|EAF1|85403|ELL associated factor 1##BC041329|EAF1|85403|ELL associated factor 1##AF272973|EAF1|85403|ELL associated factor 1##BC022400|METTL6|131965|methyltransferase like 6##AK057791|METTL6|131965|methyltransferase like 6##NM_152396|METTL6|131965|methyltransferase like 6##AK293370|METTL6|131965|methyltransferase like 6##BC126363|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC144004|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC074828|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##BC074829|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150334|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150335|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150336|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150337|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150338|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AY150339|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AJ225895|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AF057036|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_005677|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##NM_080539|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##AK289688|COLQ|8292|collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase##DQ895558|HACL1|26061|2-hydroxyacyl-CoA lyase 1##EU176367|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AF161397|HACL1|26061|2-hydroxyacyl-CoA lyase 1##BC007440|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AJ131753|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK056977|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK301546|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK302086|HACL1|26061|2-hydroxyacyl-CoA lyase 1##BC001627|HACL1|26061|2-hydroxyacyl-CoA lyase 1##AK301990|HACL1|26061|2-hydroxyacyl-CoA lyase 1##NM_012260|HACL1|26061|2-hydroxyacyl-CoA lyase 1	0.983551	CTCF.p2:0:0.984
chr7	105899274	105899435	reg1037509.p1	3.623	+	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	-146339	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	-146610	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	-146673	-	AB590725 CU687232 U02020 BC020691 TSC_hg19_v1_chr7_-_105925367 AK292851 AK304085	26008	-	BC072439 TSC_hg19_v1_chr7_-_105925430 BC106046 NM_005746	26169	-	AK093350 AX748070 BC013906 TSC_hg19_v1_chr7_-_106301480 NM_175884	402149	-	EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##X61382|SYPL1|6856|synaptophysin-like 1##U02020|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC020691|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK292851|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK304085|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC072439|NAMPT|10135|nicotinamide phosphoribosyltransferase##BC106046|NAMPT|10135|nicotinamide phosphoribosyltransferase##NM_005746|NAMPT|10135|nicotinamide phosphoribosyltransferase##AK093350|C7orf74|168455|chromosome 7 open reading frame 74##BC013906|C7orf74|168455|chromosome 7 open reading frame 74##NM_175884|C7orf74|168455|chromosome 7 open reading frame 74	0.0	
chr7	116229001	116229181	reg1011200.p1	3.623	+	NM_001172896 TSC_hg19_v1_chr7_+_116166415 AF172085 NM_001172897 AK307501 EF649773 EF649774 AB209926	-62687	+	TSC_hg19_v1_chr7_+_116165089 Z18951 BC082246 DQ890647 DQ893827 EU176473 AB489179 AM393679 AB451284 AB451416 BT007143	-63989	+	BC009685 TSC_hg19_v1_chr7_+_116165054 BC006432 NM_001172895 AY762103	-64033	+	TSC_hg19_v1_chr7_+_116312490 EU176015 J02958 NM_000245 NM_001127500 X54559 DQ656040 BC130420 AK309532	83381	+	AK296974 TSC_hg19_v1_chr7_+_116364175	135084	+	TSC_hg19_v1_chr7_+_116395441 BC127890	166360	+	NM_001172896|CAV1|857|caveolin 1, caveolae protein, 22kDa##AF172085|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172897|CAV1|857|caveolin 1, caveolae protein, 22kDa##AK307501|CAV1|857|caveolin 1, caveolae protein, 22kDa##EF649773|CAV1|857|caveolin 1, caveolae protein, 22kDa##EF649774|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB209926|CAV1|857|caveolin 1, caveolae protein, 22kDa##Z18951|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC082246|CAV1|857|caveolin 1, caveolae protein, 22kDa##DQ890647|CAV1|857|caveolin 1, caveolae protein, 22kDa##DQ893827|CAV1|857|caveolin 1, caveolae protein, 22kDa##EU176473|CAV1|857|caveolin 1, caveolae protein, 22kDa##AM393679|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB451284|CAV1|857|caveolin 1, caveolae protein, 22kDa##AB451416|CAV1|857|caveolin 1, caveolae protein, 22kDa##BT007143|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC009685|CAV1|857|caveolin 1, caveolae protein, 22kDa##BC006432|CAV1|857|caveolin 1, caveolae protein, 22kDa##NM_001172895|CAV1|857|caveolin 1, caveolae protein, 22kDa##AY762103|CAV1|857|caveolin 1, caveolae protein, 22kDa##EU176015|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##J02958|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_000245|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##NM_001127500|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##X54559|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##BC130420|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK309532|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)##AK296974|MET|4233|met proto-oncogene (hepatocyte growth factor receptor)	0.0	
chr7	71648975	71649108	reg1044535.p1	3.623	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	-1051253	+	TSC_hg19_v1_chr7_+_70231164 AK296981	-1417836	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-2584453	+	AK123862 TSC_hg19_v1_chr7_-_71801809	152737	-	NM_001017440 TSC_hg19_v1_chr7_-_71802376	153263	-	NM_031468	228318	-	AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK296981|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2##AK123862|CALN1|83698|calneuron 1##NM_001017440|CALN1|83698|calneuron 1##NM_031468|CALN1|83698|calneuron 1	0.985644	CTCF.p2:-29:0.986
chr11	13300082	13300216	reg1041208.p1	3.622	+	TSC_hg19_v1_chr11_+_13299403 BC031214 BC034314	-694	+	TSC_hg19_v1_chr11_+_13299376 AF044288 AK095749	-767	+	TSC_hg19_v1_chr11_+_13299375 U60415	-776	+	AK298226 TSC_hg19_v1_chr11_-_13484770 AK310935 AK292392 AK095946 BC005071 AL832981 NM_032320 AF329102	184642	-	V00597 BC096142 BC096143 BC096144 BC096145 NM_000315	217396	-	TSC_hg19_v1_chr11_+_13690212 NM_032228 AY358784	390041	+	BC031214|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AF044288|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK095749|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##U60415|ARNTL|406|aryl hydrocarbon receptor nuclear translocator-like##AK298226|BTBD10|84280|BTB (POZ) domain containing 10##AK310935|BTBD10|84280|BTB (POZ) domain containing 10##AK292392|BTBD10|84280|BTB (POZ) domain containing 10##AK095946|BTBD10|84280|BTB (POZ) domain containing 10##BC005071|BTBD10|84280|BTB (POZ) domain containing 10##AL832981|BTBD10|84280|BTB (POZ) domain containing 10##NM_032320|BTBD10|84280|BTB (POZ) domain containing 10##AF329102|BTBD10|84280|BTB (POZ) domain containing 10##V00597|PTH|5741|parathyroid hormone##BC096142|PTH|5741|parathyroid hormone##BC096143|PTH|5741|parathyroid hormone##BC096144|PTH|5741|parathyroid hormone##BC096145|PTH|5741|parathyroid hormone##NM_000315|PTH|5741|parathyroid hormone##NM_032228|FAR1|84188|fatty acyl CoA reductase 1##AY358784|FAR1|84188|fatty acyl CoA reductase 1	0.0	
chr11	59686620	59686727	reg1038024.p1	3.622	+	DQ892807 DQ896054 AK292990 BC018632 J05068 NM_001062	-52682	-	CU691524 DQ892469 DQ895682 AK301290 AK301295 X76562 BC037958 NM_005142 AK314275	-73715	-	CR457117 CU674518 TSC_hg19_v1_chr11_-_59578247 BC001040 BC019269 AB049642 AK000491 AF183428 NM_017840	-108436	-	BC048121 NM_173801 AK093517 AX748179 BC036256	121141	+	TSC_hg19_v1_chr11_+_59824100 NM_001031666 NM_001031809 NM_006138	137413	+	TSC_hg19_v1_chr11_+_59824137 L35848 BC008487	137476	+	DQ892807|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##DQ896054|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##AK292990|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##BC018632|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##J05068|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##NM_001062|TCN1|6947|transcobalamin I (vitamin B12 binding protein, R binder family)##DQ892469|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##DQ895682|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##AK301290|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##AK301295|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##X76562|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##BC037958|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##NM_005142|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##AK314275|GIF|2694|gastric intrinsic factor (vitamin B synthesis)##CR457117|MRPL16|54948|mitochondrial ribosomal protein L16##BC001040|MRPL16|54948|mitochondrial ribosomal protein L16##BC019269|MRPL16|54948|mitochondrial ribosomal protein L16##AB049642|MRPL16|54948|mitochondrial ribosomal protein L16##AK000491|MRPL16|54948|mitochondrial ribosomal protein L16##AF183428|MRPL16|54948|mitochondrial ribosomal protein L16##NM_017840|MRPL16|54948|mitochondrial ribosomal protein L16##BC048121|PLAC1L|219990|placenta-specific 1-like##NM_173801|PLAC1L|219990|placenta-specific 1-like##AK093517|PLAC1L|219990|placenta-specific 1-like##BC036256|PLAC1L|219990|placenta-specific 1-like##NM_001031666|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##NM_001031809|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##NM_006138|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##L35848|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)##BC008487|MS4A3|932|membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)	0.983212	CTCF.p2:-1:0.983
chr13	24269995	24270103	reg1040535.p1	3.622	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	-116517	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-125594	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-262209	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	192967	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	193465	-	NM_001135816 BC142999	193543	+	BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.340789	CTCF.p2:-106:0.341
chr20	43864875	43864980	reg1035528.p1	3.622	+	BC005262 M81652 NM_003008 AK312932 AX772816 BC056675 BC070306 AB464703	-14908	+	NM_003007 AK291811 BC005229 BC007096 BC011442 BC055416 J04440 AB591040 BT007177 CU691118	-29262	+	NM_002638 BC010952 DQ892710 DQ895962 AB590207 Z18538 CR542234	-61376	+	AF114471 X04503 AB464192 DQ891365 DQ894545 AK312192 X04470 TSC_hg19_v1_chr20_-_43883206 AX772818 BC020708 NM_003064	18268	-	NM_014276 AB024964 AB026048 AB027710	70599	+	BC151219 AK074595 BC141811 AK074597 NM_003833 NM_030590 NM_030592	72015	-	BC005262|SEMG2|6407|semenogelin II##M81652|SEMG2|6407|semenogelin II##NM_003008|SEMG2|6407|semenogelin II##AK312932|SEMG2|6407|semenogelin II##BC056675|SEMG2|6407|semenogelin II##BC070306|SEMG2|6407|semenogelin II##NM_003007|SEMG1|6406|semenogelin I##BC005229|SEMG1|6406|semenogelin I##BC007096|SEMG1|6406|semenogelin I##BC011442|SEMG1|6406|semenogelin I##BC055416|SEMG1|6406|semenogelin I##J04440|SEMG1|6406|semenogelin I##BT007177|SEMG1|6406|semenogelin I##NM_002638|PI3|5266|peptidase inhibitor 3, skin-derived##BC010952|PI3|5266|peptidase inhibitor 3, skin-derived##DQ892710|PI3|5266|peptidase inhibitor 3, skin-derived##DQ895962|PI3|5266|peptidase inhibitor 3, skin-derived##Z18538|PI3|5266|peptidase inhibitor 3, skin-derived##CR542234|PI3|5266|peptidase inhibitor 3, skin-derived##AF114471|SLPI|6590|secretory leukocyte peptidase inhibitor##X04503|SLPI|6590|secretory leukocyte peptidase inhibitor##DQ891365|SLPI|6590|secretory leukocyte peptidase inhibitor##DQ894545|SLPI|6590|secretory leukocyte peptidase inhibitor##AK312192|SLPI|6590|secretory leukocyte peptidase inhibitor##X04470|SLPI|6590|secretory leukocyte peptidase inhibitor##AX772818|SLPI|6590|secretory leukocyte peptidase inhibitor##BC020708|SLPI|6590|secretory leukocyte peptidase inhibitor##NM_003064|SLPI|6590|secretory leukocyte peptidase inhibitor##NM_014276|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB024964|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB026048|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##AB027710|RBPJL|11317|recombination signal binding protein for immunoglobulin kappa J region-like##BC151219|MATN4|8785|matrilin 4##AK074595|MATN4|8785|matrilin 4##BC141811|MATN4|8785|matrilin 4##AK074597|MATN4|8785|matrilin 4##NM_003833|MATN4|8785|matrilin 4##NM_030590|MATN4|8785|matrilin 4##NM_030592|MATN4|8785|matrilin 4	0.6352	CTCF.p2:0:0.245	CTCF.p2:32:0.390
chr2	112677087	112677200	reg1038352.p1	3.622	+	TSC_hg19_v1_chr2_+_112656224 BC114917 BC114918	-20923	+	TSC_hg19_v1_chr2_+_112656183 AK316584 U08023 NM_006343	-20958	+	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	-35382	-	NM_032824 AK027587 TSC_hg19_v1_chr2_+_112812871	135698	+	TSC_hg19_v1_chr2_+_112812903 BC115373	135804	+	TSC_hg19_v1_chr2_+_112813153 AK290294 AY429534 AY429535	136044	+	BC114917|MERTK|10461|c-mer proto-oncogene tyrosine kinase##BC114918|MERTK|10461|c-mer proto-oncogene tyrosine kinase##AK316584|MERTK|10461|c-mer proto-oncogene tyrosine kinase##U08023|MERTK|10461|c-mer proto-oncogene tyrosine kinase##NM_006343|MERTK|10461|c-mer proto-oncogene tyrosine kinase##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1##NM_032824|TMEM87B|84910|transmembrane protein 87B##AK027587|TMEM87B|84910|transmembrane protein 87B##BC115373|TMEM87B|84910|transmembrane protein 87B##AK290294|TMEM87B|84910|transmembrane protein 87B##AY429534|TMEM87B|84910|transmembrane protein 87B##AY429535|TMEM87B|84910|transmembrane protein 87B	0.0	
chr2	165998268	165998367	reg1033443.p1	3.622	+	AK293998 AK097141 NM_001199148 NM_173512	-186303	-	AK225849 BC006264 TSC_hg19_v1_chr2_-_165698685 AK294937	-299695	-	TSC_hg19_v1_chr2_-_165698334 AK002054	-299990	-	AF225986 AF225987 AK299757 TSC_hg19_v1_chr2_-_166060561 NM_001081676 NM_001081677 NM_006922 DQ993536	62260	-	AK289656 NM_001040142 DQ993531 BC029489 BC047398 BC048417	97615	+	NM_021007	152023	+	AK293998|SLC38A11|151258|solute carrier family 38, member 11##AK097141|SLC38A11|151258|solute carrier family 38, member 11##NM_001199148|SLC38A11|151258|solute carrier family 38, member 11##NM_173512|SLC38A11|151258|solute carrier family 38, member 11##AK225849|COBLL1|22837|COBL-like 1##BC006264|COBLL1|22837|COBL-like 1##AK294937|COBLL1|22837|COBL-like 1##AK002054|COBLL1|22837|COBL-like 1##AF225986|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AF225987|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AK299757|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001081676|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_001081677|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##NM_006922|SCN3A|6328|sodium channel, voltage-gated, type III, alpha subunit##AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_021007|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit	0.678963	CTCF.p2:5:0.679
chr2	169312585	169312714	reg1036391.p2	3.622	+	TSC_hg19_v1_chr2_-_169104075 BC146813 AY629298 AF099989 NM_013233 AF030403	-208576	-	NM_020981	-637468	+	EF119711 EF119717 NM_001199144 NM_001199145	-1268857	+	TSC_hg19_v1_chr2_+_169312764 AK172775	110	+	TSC_hg19_v1_chr2_+_169312801 NM_203463 BC109284 BC109285 AB527953	226	+	AK093444 AX748130 NM_001171631	330399	+	BC146813|STK39|27347|serine threonine kinase 39##AF099989|STK39|27347|serine threonine kinase 39##NM_013233|STK39|27347|serine threonine kinase 39##AF030403|STK39|27347|serine threonine kinase 39##NM_020981|B3GALT1|8708|UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1##EF119711|XIRP2|129446|xin actin-binding repeat containing 2##EF119717|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199144|XIRP2|129446|xin actin-binding repeat containing 2##NM_001199145|XIRP2|129446|xin actin-binding repeat containing 2##AK172775|CERS6|253782|ceramide synthase 6##NM_203463|CERS6|253782|ceramide synthase 6##BC109284|CERS6|253782|ceramide synthase 6##BC109285|CERS6|253782|ceramide synthase 6##AK093444|NOSTRIN|115677|nitric oxide synthase trafficker##NM_001171631|NOSTRIN|115677|nitric oxide synthase trafficker	0.0	
chr2	20423365	20423503	reg1035388.p1	3.622	+	NM_014713	-171646	-	TSC_hg19_v1_chr2_-_20251415 AY359028 D14696 BC003158 AK129875	-172007	-	CR456758 TSC_hg19_v1_chr2_-_20251382 BC000421 AK304433 BC093075	-172096	-	X60306 AB464260 CU679093 DQ893265 DQ896595 TSC_hg19_v1_chr2_-_20424892 AK299385 J05392 AK313974 AK222739 BC008765 AJ551176 AK311409 NM_002997	1353	-	TSC_hg19_v1_chr2_-_20425168 NM_001006946	1745	-	AF272350 TSC_hg19_v1_chr2_-_20512079	88615	-	NM_014713|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AY359028|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##D14696|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC003158|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK129875|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##CR456758|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC000421|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK304433|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC093075|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##X60306|SDC1|6382|syndecan 1##DQ893265|SDC1|6382|syndecan 1##DQ896595|SDC1|6382|syndecan 1##AK299385|SDC1|6382|syndecan 1##J05392|SDC1|6382|syndecan 1##AK313974|SDC1|6382|syndecan 1##AK222739|SDC1|6382|syndecan 1##BC008765|SDC1|6382|syndecan 1##AJ551176|SDC1|6382|syndecan 1##NM_002997|SDC1|6382|syndecan 1##NM_001006946|SDC1|6382|syndecan 1##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)	0.0	
chr2	38265099	38265166	reg1016617.p1	3.622	+	NM_001170793 NM_144713 AK057516 AF435956	-87532	+	BC024243 NM_001170792	-109231	+	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	-112700	+	U03688 BC012049 TSC_hg19_v1_chr2_-_38303294 AK297039 AK303862	38150	-	TSC_hg19_v1_chr2_-_38303315 AK312686 NM_000104	38188	-	AK316179 TSC_hg19_v1_chr2_-_38525609	260437	-	NM_001170793|FAM82A1|151393|family with sequence similarity 82, member A1##NM_144713|FAM82A1|151393|family with sequence similarity 82, member A1##AK057516|FAM82A1|151393|family with sequence similarity 82, member A1##AF435956|FAM82A1|151393|family with sequence similarity 82, member A1##BC024243|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170792|FAM82A1|151393|family with sequence similarity 82, member A1##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1##U03688|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##BC012049|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK303862|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK312686|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##NM_000104|CYP1B1|1545|cytochrome P450, family 1, subfamily B, polypeptide 1##AK316179|ATL2|64225|atlastin GTPase 2	0.0	
chr2	96441029	96441184	reg1040772.p2	3.622	+	BC015353 NM_138800	-183341	+	NM_001164464	-290628	-	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	-372627	+	TSC_hg19_v1_chr2_-_96482383 BC117383 BC126153 AK057596	41339	-	TSC_hg19_v1_chr2_-_96657677 AK302433	216516	-	TSC_hg19_v1_chr2_+_96676311 BC015216	235218	+	BC015353|TRIM43|129868|tripartite motif containing 43##NM_138800|TRIM43|129868|tripartite motif containing 43##NM_001164464|TRIM43B|653192|tripartite motif containing 43B##AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##AK057596|LINC00342|150759|long intergenic non-protein coding RNA 342##AK302433|ANKRD36C|400986|ankyrin repeat domain 36C	0.553626	CTCF.p2:-8:0.554
chr3	154476212	154476290	reg1043995.p1	3.622	+	DQ318360 NM_001038705	-328748	-	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	-433991	-	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	-637049	+	AK310664 NM_000902 BX647134	321198	+	TSC_hg19_v1_chr3_+_154797644 NM_007287	321423	+	TSC_hg19_v1_chr3_+_154797803 BC106070	321555	+	DQ318360|GPR149|344758|G protein-coupled receptor 149##NM_001038705|GPR149|344758|G protein-coupled receptor 149##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK310664|MME|4311|membrane metallo-endopeptidase##NM_000902|MME|4311|membrane metallo-endopeptidase##BX647134|MME|4311|membrane metallo-endopeptidase##NM_007287|MME|4311|membrane metallo-endopeptidase##BC106070|MME|4311|membrane metallo-endopeptidase	0.82643	CTCF.p2:10:0.826
chr6	14161222	14161306	reg1039800.p1	3.622	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-43242	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-43359	+	NM_001251901	-43778	+	TSC_hg19_v1_chr6_+_15245702 AK302624	1084453	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	1085148	+	BC033996 TSC_hg19_v1_chr6_-_15248900	1087637	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.0	
chr9	132663090	132663241	reg1036139.p1	3.622	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-65400	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-65443	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-65481	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	142189	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	142323	-	BC039728 NM_001136557 NM_001136558 NM_020960	152819	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.058939	
chr11	36840060	36840175	reg1036291.p1	3.621	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-220315	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-224013	+	NM_000448 M29474	-250549	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	3474477	-	AB046800 NM_020929	3475546	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	6493401	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.99917	CTCF.p2:29:0.999
chr11	9285470	9285649	reg1034985.p1	3.621	+	TSC_hg19_v1_chr11_-_9225783 AK302478	-59738	-	BC111690 AK131552 AK123039 NM_001170690 NM_020974 TSC_hg19_v1_chr11_-_9113185	-172421	-	BC008835 TSC_hg19_v1_chr11_-_9025549 AK024750 AK098694 AK296484 NM_020645	-259996	-	AB029014 TSC_hg19_v1_chr11_-_9286891 BC071596 NM_001243254 NM_015213	1303	-	AK303339 TSC_hg19_v1_chr11_-_9336043 BC064366 BC091524	50500	-	TSC_hg19_v1_chr11_-_9336141 D26067	50579	-	AK302478|DENND5A|23258|DENN/MADD domain containing 5A##BC111690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK131552|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK123039|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_001170690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_020974|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##BC008835|NRIP3|56675|nuclear receptor interacting protein 3##AK024750|NRIP3|56675|nuclear receptor interacting protein 3##AK098694|NRIP3|56675|nuclear receptor interacting protein 3##AK296484|NRIP3|56675|nuclear receptor interacting protein 3##NM_020645|NRIP3|56675|nuclear receptor interacting protein 3##AB029014|DENND5A|23258|DENN/MADD domain containing 5A##BC071596|DENND5A|23258|DENN/MADD domain containing 5A##NM_001243254|DENND5A|23258|DENN/MADD domain containing 5A##NM_015213|DENND5A|23258|DENN/MADD domain containing 5A##AK303339|TMEM41B|440026|transmembrane protein 41B##BC064366|TMEM41B|440026|transmembrane protein 41B##BC091524|TMEM41B|440026|transmembrane protein 41B##D26067|TMEM41B|440026|transmembrane protein 41B	0.0	
chr12	118643260	118643404	reg1037193.p2	3.621	+	TSC_hg19_v1_chr12_+_118573963 AB528565 X85033	-69354	+	TSC_hg19_v1_chr12_+_118573928 BC008714 AK311927 D16111 BC018799 AK308056 BC031102 AK299414 HM131449	-69409	+	TSC_hg19_v1_chr12_+_118573907 NM_002567 BC017396 X75252 AK226006	-69457	+	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	167296	-	TSC_hg19_v1_chr12_-_118810713 NM_016281	167398	-	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	171070	+	X85033|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC008714|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK311927|PEBP1|5037|phosphatidylethanolamine binding protein 1##D16111|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC018799|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK308056|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC031102|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK299414|PEBP1|5037|phosphatidylethanolamine binding protein 1##HM131449|PEBP1|5037|phosphatidylethanolamine binding protein 1##NM_002567|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC017396|PEBP1|5037|phosphatidylethanolamine binding protein 1##X75252|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK226006|PEBP1|5037|phosphatidylethanolamine binding protein 1##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##NM_016281|TAOK3|51347|TAO kinase 3##BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)	0.0	
chr12	122227929	122228109	reg1040934.p1	3.621	+	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	-77275	+	BC057760 NM_173855	-120460	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	-163376	+	TSC_hg19_v1_chr12_-_122231563 AK000254 AF239923 BC018208 NM_019034	3555	-	TSC_hg19_v1_chr12_-_122240852 AK311480	12838	-	TSC_hg19_v1_chr12_+_122242580 NM_015048 JF813787	14592	+	AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK000254|RHOF|54509|ras homolog gene family, member F (in filopodia)##AF239923|RHOF|54509|ras homolog gene family, member F (in filopodia)##BC018208|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_019034|RHOF|54509|ras homolog gene family, member F (in filopodia)##NM_015048|SETD1B|23067|SET domain containing 1B##JF813787|SETD1B|23067|SET domain containing 1B	0.0	
chr16	15149608	15149776	reg1041019.p1	3.621	+	AY203955 TSC_hg19_v1_chr16_+_15069016 DQ111782	-80660	+	AK299111 BC060871 TSC_hg19_v1_chr16_+_15068985	-80707	+	BX648066 TSC_hg19_v1_chr16_+_15068982	-80709	+	CU675948 AF092440 BC017336 NM_173474 AK300557 TSC_hg19_v1_chr16_-_15149897	185	-	AB527833 AK300253 HQ258337 BC036182 AK314769 AK316520 BC132688 BC132690 BC104660 AJ272050 AF227156 NM_018427 AK225662	38436	-	TSC_hg19_v1_chr16_+_15489610 DQ004255 DQ004256 NM_001128423 NM_173803	339909	+	AY203955|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##DQ111782|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##AK299111|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BC060871|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##BX648066|PDXDC1|23042|pyridoxal-dependent decarboxylase domain containing 1##AF092440|NTAN1|123803|N-terminal asparagine amidase##BC017336|NTAN1|123803|N-terminal asparagine amidase##NM_173474|NTAN1|123803|N-terminal asparagine amidase##AK300557|NTAN1|123803|N-terminal asparagine amidase##AK300253|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##HQ258337|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC036182|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK314769|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK316520|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132688|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC132690|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##BC104660|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AJ272050|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AF227156|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##NM_018427|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##AK225662|RRN3|54700|RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)##DQ004255|MPV17L|255027|MPV17 mitochondrial membrane protein-like##DQ004256|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_001128423|MPV17L|255027|MPV17 mitochondrial membrane protein-like##NM_173803|MPV17L|255027|MPV17 mitochondrial membrane protein-like	0.0	
chr16	84662227	84662407	reg1026867.p2	3.621	+	TSC_hg19_v1_chr16_-_84651682 L54057 BC053682 BC010039 NM_021149 AK315675 BC016702 BC042970	-10657	-	AB590839 BT006968 EU832743 TSC_hg19_v1_chr16_-_84651627 BC010884	-10741	-	BC023251 TSC_hg19_v1_chr16_-_84538263 AB046829 BC060844 AK291237 NM_020947 AK300132 AK310887	-124026	-	TSC_hg19_v1_chr16_+_84682127 BC033821 NM_024731 BC032400	19817	+	NM_005153 TSC_hg19_v1_chr16_+_84733587 BC000263	71257	+	TSC_hg19_v1_chr16_+_84733603 AK315570 CR749515	71283	+	L54057|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC053682|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010039|COTL1|23406|coactosin-like 1 (Dictyostelium)##NM_021149|COTL1|23406|coactosin-like 1 (Dictyostelium)##AK315675|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC016702|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC042970|COTL1|23406|coactosin-like 1 (Dictyostelium)##BT006968|COTL1|23406|coactosin-like 1 (Dictyostelium)##EU832743|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC010884|COTL1|23406|coactosin-like 1 (Dictyostelium)##BC023251|KIAA1609|57707|KIAA1609##AB046829|KIAA1609|57707|KIAA1609##BC060844|KIAA1609|57707|KIAA1609##AK291237|KIAA1609|57707|KIAA1609##NM_020947|KIAA1609|57707|KIAA1609##AK300132|KIAA1609|57707|KIAA1609##AK310887|KIAA1609|57707|KIAA1609##BC033821|KLHL36|79786|kelch-like 36 (Drosophila)##NM_024731|KLHL36|79786|kelch-like 36 (Drosophila)##BC032400|KLHL36|79786|kelch-like 36 (Drosophila)##NM_005153|USP10|9100|ubiquitin specific peptidase 10##BC000263|USP10|9100|ubiquitin specific peptidase 10##AK315570|USP10|9100|ubiquitin specific peptidase 10##CR749515|USP10|9100|ubiquitin specific peptidase 10	0.0	
chr4	106738041	106738154	reg1039275.p1	3.621	+	AK292355 BC032942 NM_001031720	-106130	+	TSC_hg19_v1_chr4_+_106629965 AK303547 BX648355 NM_024751 AK023335 AK225563	-108124	+	TSC_hg19_v1_chr4_-_106629819 BC014442 AK314939 NM_001142471 NM_020395	-108256	-	TSC_hg19_v1_chr4_+_106816593 AK295772 NM_001033047 NM_001184690 NM_001184691 NM_001184692 NM_001184693 AK302477 AK304279 AY358336	78504	+	TSC_hg19_v1_chr4_+_106816634 AK290029 AK304721 AL832465 BC131587	78593	+	NM_001142415 AK297950 AK095951 NM_004757	498712	+	AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BC014442|INTS12|57117|integrator complex subunit 12##AK314939|INTS12|57117|integrator complex subunit 12##NM_001142471|INTS12|57117|integrator complex subunit 12##NM_020395|INTS12|57117|integrator complex subunit 12##AK295772|NPNT|255743|nephronectin##NM_001033047|NPNT|255743|nephronectin##NM_001184690|NPNT|255743|nephronectin##NM_001184691|NPNT|255743|nephronectin##NM_001184692|NPNT|255743|nephronectin##NM_001184693|NPNT|255743|nephronectin##AK302477|NPNT|255743|nephronectin##AK304279|NPNT|255743|nephronectin##AY358336|NPNT|255743|nephronectin##AK290029|NPNT|255743|nephronectin##AK304721|NPNT|255743|nephronectin##AL832465|NPNT|255743|nephronectin##BC131587|NPNT|255743|nephronectin##NM_001142415|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##AK297950|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##AK095951|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1##NM_004757|AIMP1|9255|aminoacyl tRNA synthetase complex-interacting multifunctional protein 1	0.0	
chr5	71748618	71748689	reg1028826.p2	3.621	+	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-132431	+	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	-132451	+	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	-132573	-	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	54530	-	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	363837	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	395288	+	BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1	0.0	
chr10	1020078	1020169	reg1041659.p1	3.620	+	BC131630 BC152443 D86971 NM_015155	-88426	-	TSC_hg19_v1_chr10_-_735609 AB023151 BC063313 NM_014974	-284432	-	AK096000 BC144473 AK296168 TSC_hg19_v1_chr10_+_696010 AK096013	-324172	+	TSC_hg19_v1_chr10_-_1034270 AK126769	14146	-	AK130873 TSC_hg19_v1_chr10_-_1034282	14176	-	TSC_hg19_v1_chr10_+_1034348 AK001552 NM_012341	14218	+	BC131630|LARP4B|23185|La ribonucleoprotein domain family, member 4B##BC152443|LARP4B|23185|La ribonucleoprotein domain family, member 4B##D86971|LARP4B|23185|La ribonucleoprotein domain family, member 4B##NM_015155|LARP4B|23185|La ribonucleoprotein domain family, member 4B##AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##AK096000|C10orf108|414235|chromosome 10 open reading frame 108##AK296168|C10orf108|414235|chromosome 10 open reading frame 108##AK096013|C10orf108|414235|chromosome 10 open reading frame 108##AK130873|LOC100288619|100288619|uncharacterized LOC100288619##AK001552|GTPBP4|23560|GTP binding protein 4##NM_012341|GTPBP4|23560|GTP binding protein 4	0.0	
chr10	114009631	114009714	reg1044936.p1	3.620	+	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	-66167	-	AB046780 TSC_hg19_v1_chr10_-_113933602	-76111	-	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	-1172820	+	BC113497 BC113499 AF312827 HQ258194 NM_058222	33780	+	AK000339 TSC_hg19_v1_chr10_+_114133781	124106	+	TSC_hg19_v1_chr10_+_114133873 NM_203379	124231	+	AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta##AK000339|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##NM_203379|ACSL5|51703|acyl-CoA synthetase long-chain family member 5	0.0	
chr10	25241761	25241860	reg1039120.p1	3.620	+	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	-278	-	AF480466 NM_020824 TSC_hg19_v1_chr10_-_25012632	-229204	-	AK307604 TSC_hg19_v1_chr10_-_25012174	-229637	-	CU693144 DQ892076 DQ895269 BC064597 AK095021 NM_145010 AY454125 AK292495 BC026165	63164	-	NM_024838 TSC_hg19_v1_chr10_+_25305540 AK125249 BC035132 BX647989	63740	+	AY528411 NM_020752	222479	+	AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AF480466|ARHGAP21|57584|Rho GTPase activating protein 21##NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21##DQ892076|ENKUR|219670|enkurin, TRPC channel interacting protein##DQ895269|ENKUR|219670|enkurin, TRPC channel interacting protein##AK095021|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_145010|ENKUR|219670|enkurin, TRPC channel interacting protein##AY454125|ENKUR|219670|enkurin, TRPC channel interacting protein##AK292495|ENKUR|219670|enkurin, TRPC channel interacting protein##BC026165|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_024838|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AK125249|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BC035132|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BX647989|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AY528411|GPR158|57512|G protein-coupled receptor 158##NM_020752|GPR158|57512|G protein-coupled receptor 158	0.969386	CTCF.p2:4:0.969
chr10	35484755	35484935	reg1017185.p1	3.620	+	AK289379 NM_182721 NM_182722 NM_182723 NM_182724 NM_182725 AK291566	-15	+	D14826 NM_182717 NM_182718 NM_182719 NM_182720 AK290612 AF069065 U44836	-760	+	NM_182769 NM_182770 AF417233 AY292864 BC090051 AK301906	-20314	+	AF429969 AK057280 NM_181698	51107	+	TSC_hg19_v1_chr10_+_35625400 AK314666	140611	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	140949	+	AK289379|CREM|1390|cAMP responsive element modulator##NM_182721|CREM|1390|cAMP responsive element modulator##NM_182722|CREM|1390|cAMP responsive element modulator##NM_182723|CREM|1390|cAMP responsive element modulator##NM_182724|CREM|1390|cAMP responsive element modulator##NM_182725|CREM|1390|cAMP responsive element modulator##AK291566|CREM|1390|cAMP responsive element modulator##D14826|CREM|1390|cAMP responsive element modulator##NM_182717|CREM|1390|cAMP responsive element modulator##NM_182718|CREM|1390|cAMP responsive element modulator##NM_182719|CREM|1390|cAMP responsive element modulator##NM_182720|CREM|1390|cAMP responsive element modulator##AK290612|CREM|1390|cAMP responsive element modulator##AF069065|CREM|1390|cAMP responsive element modulator##U44836|CREM|1390|cAMP responsive element modulator##NM_182769|CREM|1390|cAMP responsive element modulator##NM_182770|CREM|1390|cAMP responsive element modulator##AF417233|CREM|1390|cAMP responsive element modulator##AY292864|CREM|1390|cAMP responsive element modulator##BC090051|CREM|1390|cAMP responsive element modulator##AK301906|CREM|1390|cAMP responsive element modulator##AF429969|CCNY|219771|cyclin Y##AK057280|CCNY|219771|cyclin Y##NM_181698|CCNY|219771|cyclin Y##AK314666|CCNY|219771|cyclin Y##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y	0.0	
chr15	25684086	25684153	reg1026958.p2	3.620	+	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	-18	-	L07557 NM_130838	-33470	-	AB061718 TSC_hg19_v1_chr15_+_25281192	-402970	+	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	59	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	424234	-	AB051358 TSC_hg19_v1_chr15_-_26108932	424781	-	BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##AB061718|SNRPN|6638|small nuclear ribonucleoprotein polypeptide N##NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##AB051358|ATP10A|57194|ATPase, class V, type 10A	0.0	
chr17	19140807	19140920	reg1029125.p2	3.620	+	TSC_hg19_v1_chr17_+_19140720 NM_001102664 NM_014964 NM_148921 AK092366 AK024115 AB028988 BC070036 AK295652 AK298006 AK307455 BC015488	-155	+	BC157869 NM_001129778	-110082	+	BT019981 CR541941 CR541966 AB528891 CU687638 BC035856 U52518 BC063035 NM_006613	-190577	-	CU678304 TSC_hg19_v1_chr17_-_19265911 BC002944 AK293815 AB030506 AK297782 NM_001243473 NM_015681	125106	-	TSC_hg19_v1_chr17_+_19281077 NM_139032 NM_139033 BC007404 BC007992 U29725 AK295376	140327	+	AK309320 NM_001243475	140631	-	NM_001102664|EPN2|22905|epsin 2##NM_014964|EPN2|22905|epsin 2##NM_148921|EPN2|22905|epsin 2##AK092366|EPN2|22905|epsin 2##AK024115|EPN2|22905|epsin 2##AB028988|EPN2|22905|epsin 2##BC070036|EPN2|22905|epsin 2##AK295652|EPN2|22905|epsin 2##AK298006|EPN2|22905|epsin 2##AK307455|EPN2|22905|epsin 2##BC015488|EPN2|22905|epsin 2##BC157869|GRAPL|400581|GRB2-related adaptor protein-like##NM_001129778|GRAPL|400581|GRB2-related adaptor protein-like##BT019981|GRAP|10750|GRB2-related adaptor protein##CR541941|GRAP|10750|GRB2-related adaptor protein##CR541966|GRAP|10750|GRB2-related adaptor protein##BC035856|GRAP|10750|GRB2-related adaptor protein##U52518|GRAP|10750|GRB2-related adaptor protein##BC063035|GRAP|10750|GRB2-related adaptor protein##NM_006613|GRAP|10750|GRB2-related adaptor protein##BC002944|B9D1|27077|B9 protein domain 1##AK293815|B9D1|27077|B9 protein domain 1##AB030506|B9D1|27077|B9 protein domain 1##AK297782|B9D1|27077|B9 protein domain 1##NM_001243473|B9D1|27077|B9 protein domain 1##NM_015681|B9D1|27077|B9 protein domain 1##NM_139032|MAPK7|5598|mitogen-activated protein kinase 7##NM_139033|MAPK7|5598|mitogen-activated protein kinase 7##BC007404|MAPK7|5598|mitogen-activated protein kinase 7##BC007992|MAPK7|5598|mitogen-activated protein kinase 7##U29725|MAPK7|5598|mitogen-activated protein kinase 7##AK295376|MAPK7|5598|mitogen-activated protein kinase 7##AK309320|B9D1|27077|B9 protein domain 1##NM_001243475|B9D1|27077|B9 protein domain 1	0.0	
chr17	79766896	79766968	reg1033988.p1	3.620	+	AK307234 NM_000160 AK314247 L20316	-4916	+	TSC_hg19_v1_chr17_+_79679402 AJ131613 DQ893263 DQ896592 CU675633	-87505	+	BC007355 NM_012140 TSC_hg19_v1_chr17_+_79679381 AK075249	-87551	+	TSC_hg19_v1_chr17_-_79791143 BC017108 BC063557 BC019318 BC094876	24155	-	AK000852 TSC_hg19_v1_chr17_-_79791171 BX649156 NM_001093767 NM_207368	24229	-	TSC_hg19_v1_chr17_-_79792867 BC093707 BC112094 AF434846	25953	-	AK307234|GCGR|2642|glucagon receptor##NM_000160|GCGR|2642|glucagon receptor##AK314247|GCGR|2642|glucagon receptor##L20316|GCGR|2642|glucagon receptor##AJ131613|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##DQ893263|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##DQ896592|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##BC007355|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##NM_012140|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##AK075249|SLC25A10|1468|solute carrier family 25 (mitochondrial carrier; dicarboxylate transporter), member 10##BC017108|FAM195B|348262|family with sequence similarity 195, member B##BC063557|FAM195B|348262|family with sequence similarity 195, member B##BC019318|FAM195B|348262|family with sequence similarity 195, member B##BC094876|FAM195B|348262|family with sequence similarity 195, member B##AK000852|FAM195B|348262|family with sequence similarity 195, member B##BX649156|FAM195B|348262|family with sequence similarity 195, member B##NM_001093767|FAM195B|348262|family with sequence similarity 195, member B##NM_207368|FAM195B|348262|family with sequence similarity 195, member B##BC093707|PPP1R27|116729|protein phosphatase 1, regulatory subunit 27##BC112094|PPP1R27|116729|protein phosphatase 1, regulatory subunit 27##AF434846|PPP1R27|116729|protein phosphatase 1, regulatory subunit 27	0.028584	
chr2	136996721	136996843	reg1029599.p2	3.620	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-121106	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-122984	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-253566	-	TSC_hg19_v1_chr2_+_137523114 AK299929	526334	+	NM_001080427	751679	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1725152	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.039532	
chr21	43348769	43348918	reg1039066.p1	3.620	+	BC062323 AL833323 NM_199050	-2054	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	-49345	-	AK027424 TSC_hg19_v1_chr21_-_43187270	-161576	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	25240	-	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	81628	-	AB051810 AB051811 NM_001199527 NM_001199528	134224	+	BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15##AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1	0.0	
chr22	20905833	20905924	reg1045427.p2	3.620	+	AB463109 CU013137 CU013425 AF328769 TSC_hg19_v1_chr22_+_20861965	-43914	+	TSC_hg19_v1_chr22_+_20861902 AK297789 BC003078 BC013985 CR456537	-43960	+	TSC_hg19_v1_chr22_+_20861896 AF056191 AK297284 AK090465	-43987	+	BC017110 TSC_hg19_v1_chr22_+_20909388	3429	+	TSC_hg19_v1_chr22_+_20918811 U80745	12946	+	L36151 NM_002650	183076	-	CU013137|MED15|51586|mediator complex subunit 15##CU013425|MED15|51586|mediator complex subunit 15##AF328769|MED15|51586|mediator complex subunit 15##AK297789|MED15|51586|mediator complex subunit 15##BC003078|MED15|51586|mediator complex subunit 15##BC013985|MED15|51586|mediator complex subunit 15##CR456537|MED15|51586|mediator complex subunit 15##AF056191|MED15|51586|mediator complex subunit 15##AK297284|MED15|51586|mediator complex subunit 15##AK090465|MED15|51586|mediator complex subunit 15##BC017110|MED15|51586|mediator complex subunit 15##U80745|MED15|51586|mediator complex subunit 15##L36151|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_002650|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha	0.0	
chr2	231616042	231616134	reg1037754.p2	3.620	+	AK292382 NM_001130849 NM_001130850 AK315692	-37810	+	TSC_hg19_v1_chr2_+_231577633 BC020570	-38444	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	-38542	+	TSC_hg19_v1_chr2_+_231729608 NM_001012514 NM_001012516 NM_030926	113472	+	TSC_hg19_v1_chr2_+_231729626 AF271781 AF272043	113541	+	TSC_hg19_v1_chr2_+_231729653 AK075361 AK090975 AK303199 AX746713	113557	+	AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##NM_016289|CAB39|51719|calcium binding protein 39##NM_001012514|ITM2C|81618|integral membrane protein 2C##NM_001012516|ITM2C|81618|integral membrane protein 2C##NM_030926|ITM2C|81618|integral membrane protein 2C##AF271781|ITM2C|81618|integral membrane protein 2C##AF272043|ITM2C|81618|integral membrane protein 2C##AK075361|ITM2C|81618|integral membrane protein 2C##AK090975|ITM2C|81618|integral membrane protein 2C##AK303199|ITM2C|81618|integral membrane protein 2C	0.0	
chr2	86262947	86263088	reg1010265.p1	3.620	+	AY359105 TSC_hg19_v1_chr2_-_86116102 AK295252 AK315955 AF119415 AF344831 BC065936 AK001340 AB018356 NM_003896	-146931	-	AY152815 NM_001042437	-168225	-	TSC_hg19_v1_chr2_+_85981113 NM_032827 AK074681 BC021207 AK027614 BC094832 AB463420 AF529205	-282012	+	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	69966	-	NM_015425	70260	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	70324	+	AY359105|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF119415|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AF344831|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##BC065936|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AK001340|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AB018356|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_003896|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##AY152815|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_001042437|ST3GAL5|8869|ST3 beta-galactoside alpha-2,3-sialyltransferase 5##NM_032827|ATOH8|84913|atonal homolog 8 (Drosophila)##AK074681|ATOH8|84913|atonal homolog 8 (Drosophila)##BC021207|ATOH8|84913|atonal homolog 8 (Drosophila)##AK027614|ATOH8|84913|atonal homolog 8 (Drosophila)##BC094832|ATOH8|84913|atonal homolog 8 (Drosophila)##AF529205|ATOH8|84913|atonal homolog 8 (Drosophila)##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3	0.0	
chr5	56110775	56110903	reg1035859.p2	3.620	+	AK123389 NM_024669	-581654	-	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-820076	-	NM_001242636 NM_001242639	-961690	+	NM_005921	60	+	TSC_hg19_v1_chr5_+_56111375 AK307828	525	+	TSC_hg19_v1_chr5_+_56111395 AF042838	579	+	AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chrX	129278705	129278780	reg1035207.p2	3.620	+	DQ016496 NM_001130846	-6728	-	BC017194 AK314972 NM_001127197 TSC_hg19_v1_chrX_-_129244713	-34055	-	TSC_hg19_v1_chrX_-_129244474 NM_001421	-34264	-	CR457379 DQ016498 DQ016500 AL049704 AK314446 TSC_hg19_v1_chrX_-_129299669 AF100928	20910	-	TSC_hg19_v1_chrX_-_129299743 AK000775 AL049703 BC139738	20980	-	BC111065 TSC_hg19_v1_chrX_-_129299819 NM_001130847 NM_004208 NM_145812 NM_145813	21089	-	DQ016496|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_001130846|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##BC017194|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##AK314972|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001127197|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##NM_001421|ELF4|2000|E74-like factor 4 (ets domain transcription factor)##CR457379|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##DQ016498|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##DQ016500|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AL049704|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AK314446|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AF100928|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AK000775|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##AL049703|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##BC139738|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##BC111065|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_001130847|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_004208|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_145812|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1##NM_145813|AIFM1|9131|apoptosis-inducing factor, mitochondrion-associated, 1	0.648173	CTCF.p2:-4:0.648
chr10	35617122	35617282	reg1034491.p1	3.619	+	AF429969 AK057280 NM_181698	-81250	+	AK289379 NM_182721 NM_182722 NM_182723 NM_182724 NM_182725 AK291566	-132372	+	D14826 NM_182717 NM_182718 NM_182719 NM_182720 AK290612 AF069065 U44836	-133117	+	TSC_hg19_v1_chr10_+_35625400 AK314666	8254	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	8592	+	AK074504 NM_153368	277135	+	AF429969|CCNY|219771|cyclin Y##AK057280|CCNY|219771|cyclin Y##NM_181698|CCNY|219771|cyclin Y##AK289379|CREM|1390|cAMP responsive element modulator##NM_182721|CREM|1390|cAMP responsive element modulator##NM_182722|CREM|1390|cAMP responsive element modulator##NM_182723|CREM|1390|cAMP responsive element modulator##NM_182724|CREM|1390|cAMP responsive element modulator##NM_182725|CREM|1390|cAMP responsive element modulator##AK291566|CREM|1390|cAMP responsive element modulator##D14826|CREM|1390|cAMP responsive element modulator##NM_182717|CREM|1390|cAMP responsive element modulator##NM_182718|CREM|1390|cAMP responsive element modulator##NM_182719|CREM|1390|cAMP responsive element modulator##NM_182720|CREM|1390|cAMP responsive element modulator##AK290612|CREM|1390|cAMP responsive element modulator##AF069065|CREM|1390|cAMP responsive element modulator##U44836|CREM|1390|cAMP responsive element modulator##AK314666|CCNY|219771|cyclin Y##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa	0.0	
chr10	49554417	49554542	reg1042571.p2	3.619	+	TSC_hg19_v1_chr10_+_49514722 AK292523	-39693	+	CR749241 NM_001018071	-71553	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	-346658	-	BC130570 BC130572 BC144063 L26318 NM_002750 NM_139046 NM_139047 NM_139049 U35004 U35005 U34822 HQ258413 AB527605 AB451231 AB451271 AB451354 AB451398 DQ234352	55193	+	BC126444 BC136319 TSC_hg19_v1_chr10_-_49813119 AY324801 NM_021226 EF560749 BC037890 BC047096	258608	-	TSC_hg19_v1_chr10_-_49864302 AK055937	309826	-	AK292523|MAPK8|5599|mitogen-activated protein kinase 8##CR749241|FRMPD2|143162|FERM and PDZ domain containing 2##NM_001018071|FRMPD2|143162|FERM and PDZ domain containing 2##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B##BC130570|MAPK8|5599|mitogen-activated protein kinase 8##BC130572|MAPK8|5599|mitogen-activated protein kinase 8##BC144063|MAPK8|5599|mitogen-activated protein kinase 8##L26318|MAPK8|5599|mitogen-activated protein kinase 8##NM_002750|MAPK8|5599|mitogen-activated protein kinase 8##NM_139046|MAPK8|5599|mitogen-activated protein kinase 8##NM_139047|MAPK8|5599|mitogen-activated protein kinase 8##NM_139049|MAPK8|5599|mitogen-activated protein kinase 8##U35004|MAPK8|5599|mitogen-activated protein kinase 8##U35005|MAPK8|5599|mitogen-activated protein kinase 8##U34822|MAPK8|5599|mitogen-activated protein kinase 8##HQ258413|MAPK8|5599|mitogen-activated protein kinase 8##AB451231|MAPK8|5599|mitogen-activated protein kinase 8##AB451271|MAPK8|5599|mitogen-activated protein kinase 8##AB451354|MAPK8|5599|mitogen-activated protein kinase 8##AB451398|MAPK8|5599|mitogen-activated protein kinase 8##DQ234352|MAPK8|5599|mitogen-activated protein kinase 8##BC126444|ARHGAP22|58504|Rho GTPase activating protein 22##BC136319|ARHGAP22|58504|Rho GTPase activating protein 22##AY324801|ARHGAP22|58504|Rho GTPase activating protein 22##NM_021226|ARHGAP22|58504|Rho GTPase activating protein 22##EF560749|ARHGAP22|58504|Rho GTPase activating protein 22##BC047096|ARHGAP22|58504|Rho GTPase activating protein 22##AK055937|ARHGAP22|58504|Rho GTPase activating protein 22	0.830069	CTCF.p2:-11:0.830
chr14	89831418	89831591	reg1038568.p1	3.619	+	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-540511	+	BC150639 NM_183387 BC032685 TSC_hg19_v1_chr14_-_89259288	-572294	-	NM_207662 BC027607 AF474376	-770751	+	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	47272	-	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	51906	-	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	254091	-	AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##BC150639|EML5|161436|echinoderm microtubule associated protein like 5##NM_183387|EML5|161436|echinoderm microtubule associated protein like 5##BC032685|EML5|161436|echinoderm microtubule associated protein like 5##NM_207662|ZC3H14|79882|zinc finger CCCH-type containing 14##BC027607|ZC3H14|79882|zinc finger CCCH-type containing 14##AF474376|ZC3H14|79882|zinc finger CCCH-type containing 14##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3	0.0	
chr15	34876294	34876474	reg1037192.p2	3.619	+	BX647673 TSC_hg19_v1_chr15_-_34875067	-1315	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_001023567	-48218	-	BC032774 BC093673 BC104800 BC143254 AK097551 NM_181077	-194439	-	BC069131 BC069339 NM_020660 BC112110 BC112114 BC143788	170350	-	AK129892 AK056592 AK129902 AK290616 TSC_hg19_v1_chr15_-_35087751 BC009978 NM_005159	211453	-	AB384497 AK291615 BC127111 BC127112 TSC_hg19_v1_chr15_-_35261899 AB011132 AK315815 BX647820 EF553519 NM_014691	385543	-	BX647673|GOLGA8B|440270|golgin A8 family, member B##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_001023567|GOLGA8B|440270|golgin A8 family, member B##BC032774|GOLGA8A|23015|golgin A8 family, member A##BC093673|GOLGA8A|23015|golgin A8 family, member A##BC104800|GOLGA8A|23015|golgin A8 family, member A##BC143254|GOLGA8B|440270|golgin A8 family, member B##AK097551|GOLGA8B|440270|golgin A8 family, member B##NM_181077|GOLGA8A|23015|golgin A8 family, member A##BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa##BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa##NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa##BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa##AK129892|ACTC1|70|actin, alpha, cardiac muscle 1##AK056592|ACTC1|70|actin, alpha, cardiac muscle 1##AK129902|ACTC1|70|actin, alpha, cardiac muscle 1##AK290616|ACTC1|70|actin, alpha, cardiac muscle 1##BC009978|ACTC1|70|actin, alpha, cardiac muscle 1##NM_005159|ACTC1|70|actin, alpha, cardiac muscle 1##AK291615|AQR|9716|aquarius homolog (mouse)##BC127111|AQR|9716|aquarius homolog (mouse)##BC127112|AQR|9716|aquarius homolog (mouse)##AB011132|AQR|9716|aquarius homolog (mouse)##AK315815|AQR|9716|aquarius homolog (mouse)##BX647820|AQR|9716|aquarius homolog (mouse)##EF553519|AQR|9716|aquarius homolog (mouse)##NM_014691|AQR|9716|aquarius homolog (mouse)	0.0	
chr17	74478168	74478310	reg1032265.p2	3.619	+	NM_001088 U40347 AB593119 BC069434	-14582	+	BC092430 NM_001166579	-28807	+	TSC_hg19_v1_chr17_-_74449273 AB051521 NM_022066	-28951	-	AK303434 AY500247 AK292166 NM_001005498	5659	-	TSC_hg19_v1_chr17_-_74497506 BC016034 AK292135 NM_024599	19220	-	AJ315162 AK098057 BC029798 AB057769 BC018822 NM_134268	55463	-	NM_001088|AANAT|15|aralkylamine N-acetyltransferase##U40347|AANAT|15|aralkylamine N-acetyltransferase##AB593119|AANAT|15|aralkylamine N-acetyltransferase##BC069434|AANAT|15|aralkylamine N-acetyltransferase##BC092430|AANAT|15|aralkylamine N-acetyltransferase##NM_001166579|AANAT|15|aralkylamine N-acetyltransferase##AB051521|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_022066|UBE2O|63893|ubiquitin-conjugating enzyme E2O##AK303434|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AY500247|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292166|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001005498|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##BC016034|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292135|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_024599|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AJ315162|CYGB|114757|cytoglobin##AK098057|CYGB|114757|cytoglobin##BC029798|CYGB|114757|cytoglobin##AB057769|CYGB|114757|cytoglobin##NM_134268|CYGB|114757|cytoglobin	0.0	
chr18	21757034	21757215	reg1014048.p2	3.619	+	NM_138644 AF295037	-37676	+	AK225858 AK301889 TSC_hg19_v1_chr18_+_21719025 AF088868 AF295039 AF329634 AF295038 HQ659768	-38082	+	TSC_hg19_v1_chr18_+_21718937 BC011996 NM_012189 NM_138643 NM_153768 NM_153769 NM_153770 AK313243	-38169	+	AK314552 TSC_hg19_v1_chr18_-_21851656	94527	-	AF392449 BC098384 TSC_hg19_v1_chr18_-_21851882 BC063420	94725	-	TSC_hg19_v1_chr18_-_21851919 AK001079	94787	-	NM_138644|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF295037|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK225858|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK301889|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF088868|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF295039|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF329634|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF295038|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##BC011996|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_012189|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_138643|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_153768|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_153769|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_153770|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK313243|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK314552|OSBPL1A|114876|oxysterol binding protein-like 1A##AF392449|OSBPL1A|114876|oxysterol binding protein-like 1A##BC098384|OSBPL1A|114876|oxysterol binding protein-like 1A##BC063420|OSBPL1A|114876|oxysterol binding protein-like 1A##AK001079|OSBPL1A|114876|oxysterol binding protein-like 1A	0.0	
chr19	15408289	15408385	reg1036012.p1	3.619	+	AF386649 NM_014299 NM_058243 Y12059	-17076	-	BC115002 NM_001142886	-64525	-	BC132958 BC132960 AK026061 NM_024794	-65125	-	TSC_hg19_v1_chr19_-_15442714 BC030158 AK307664	34365	-	BC000156 TSC_hg19_v1_chr19_-_15443139	34801	-	TSC_hg19_v1_chr19_-_15443306 BC038988	34968	-	AF386649|BRD4|23476|bromodomain containing 4##NM_014299|BRD4|23476|bromodomain containing 4##NM_058243|BRD4|23476|bromodomain containing 4##Y12059|BRD4|23476|bromodomain containing 4##BC115002|EPHX3|79852|epoxide hydrolase 3##NM_001142886|EPHX3|79852|epoxide hydrolase 3##BC132958|EPHX3|79852|epoxide hydrolase 3##BC132960|EPHX3|79852|epoxide hydrolase 3##AK026061|EPHX3|79852|epoxide hydrolase 3##NM_024794|EPHX3|79852|epoxide hydrolase 3##BC030158|BRD4|23476|bromodomain containing 4##AK307664|BRD4|23476|bromodomain containing 4##BC000156|BRD4|23476|bromodomain containing 4##BC038988|BRD4|23476|bromodomain containing 4	0.0	
chr19	38997630	38997701	reg1045376.p2	3.619	+	TSC_hg19_v1_chr19_+_38924330 NM_000540 NM_001042723 J05200	-73321	+	AF448437 BC146669 BC150202 BC142721 BC151216 TSC_hg19_v1_chr19_-_38916860 AX721071 AY048119 AY048120 AY048121 FJ768677 FJ768678 FJ768679 FJ768680 FJ768681 FJ768682 NM_001146202 NM_001146203 NM_001146204 NM_001146205 NM_001146206 NM_001146207 NM_170604	-80793	-	TSC_hg19_v1_chr19_+_38893839 BC080606 AK128745	-103764	+	AB527182 TSC_hg19_v1_chr19_-_39108593 NM_001042600 NM_007181	110923	-	TSC_hg19_v1_chr19_+_39109725 NM_013234 AF077051 AF085358 AB019392 AY245432	112048	+	TSC_hg19_v1_chr19_+_39109825 BC007559 AK298635	112151	+	NM_000540|RYR1|6261|ryanodine receptor 1 (skeletal)##NM_001042723|RYR1|6261|ryanodine receptor 1 (skeletal)##J05200|RYR1|6261|ryanodine receptor 1 (skeletal)##AF448437|RASGRP4|115727|RAS guanyl releasing protein 4##BC146669|RASGRP4|115727|RAS guanyl releasing protein 4##BC150202|RASGRP4|115727|RAS guanyl releasing protein 4##BC142721|RASGRP4|115727|RAS guanyl releasing protein 4##BC151216|RASGRP4|115727|RAS guanyl releasing protein 4##AY048119|RASGRP4|115727|RAS guanyl releasing protein 4##AY048120|RASGRP4|115727|RAS guanyl releasing protein 4##AY048121|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768677|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768678|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768679|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768680|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768681|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768682|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146202|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146203|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146204|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146205|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146206|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146207|RASGRP4|115727|RAS guanyl releasing protein 4##NM_170604|RASGRP4|115727|RAS guanyl releasing protein 4##BC080606|FAM98C|147965|family with sequence similarity 98, member C##AK128745|FAM98C|147965|family with sequence similarity 98, member C##NM_001042600|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_007181|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_013234|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF077051|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF085358|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AB019392|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AY245432|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##BC007559|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK298635|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K	0.0	
chr21	32586247	32586398	reg1043521.p1	3.619	+	AB096964 NM_001099219	-175528	-	HQ258726 AB096963 BC130555 BC130557 AJ457065 NM_175858	-332464	-	AJ457063 AB096962 NM_181606	-384334	-	NM_003253 U16296 TSC_hg19_v1_chr21_-_32931371	345036	-	TSC_hg19_v1_chr21_+_33032005 NM_000454 AK312116 BC001034 X02317 EF151142 AB464254 AY049787 AY450286 BT006676 CR450355 CR541742 CU674512 EF143990	445685	+	AB032998 AK025748 AL117417 TSC_hg19_v1_chr21_-_33074136	487796	-	AB096964|KRTAP19-8|728299|keratin associated protein 19-8##NM_001099219|KRTAP19-8|728299|keratin associated protein 19-8##AB096963|KRTAP11-1|337880|keratin associated protein 11-1##BC130555|KRTAP11-1|337880|keratin associated protein 11-1##BC130557|KRTAP11-1|337880|keratin associated protein 11-1##AJ457065|KRTAP11-1|337880|keratin associated protein 11-1##NM_175858|KRTAP11-1|337880|keratin associated protein 11-1##AJ457063|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##AB096962|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_181606|KRTAP7-1|337878|keratin associated protein 7-1 (gene/pseudogene)##NM_003253|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##U16296|TIAM1|7074|T-cell lymphoma invasion and metastasis 1##NM_000454|SOD1|6647|superoxide dismutase 1, soluble##AK312116|SOD1|6647|superoxide dismutase 1, soluble##BC001034|SOD1|6647|superoxide dismutase 1, soluble##X02317|SOD1|6647|superoxide dismutase 1, soluble##EF151142|SOD1|6647|superoxide dismutase 1, soluble##AY049787|SOD1|6647|superoxide dismutase 1, soluble##AY450286|SOD1|6647|superoxide dismutase 1, soluble##BT006676|SOD1|6647|superoxide dismutase 1, soluble##CR450355|SOD1|6647|superoxide dismutase 1, soluble##CR541742|SOD1|6647|superoxide dismutase 1, soluble##EF143990|SOD1|6647|superoxide dismutase 1, soluble##AB032998|SCAF4|57466|SR-related CTD-associated factor 4##AK025748|SCAF4|57466|SR-related CTD-associated factor 4##AL117417|SCAF4|57466|SR-related CTD-associated factor 4	0.0	
chr2	139234659	139234752	reg1035847.p1	3.619	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	-512771	+	NM_001080427	-1486244	+	TSC_hg19_v1_chr2_+_137523114 AK299929	-1711589	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	24688	+	TSC_hg19_v1_chr2_+_139259500 AK021919	24785	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	303101	-	NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2	0.011953	
chr2	207307916	207308072	reg1034876.p2	3.619	+	TSC_hg19_v1_chr2_+_207139414 AK127271 NM_020923	-168527	+	AK312917 BC067833 AK290976 NM_001098199 NM_005279	-225296	-	TSC_hg19_v1_chr2_+_207024617 AK291910 AK310096 D28350 BC067787 BC029316 BC004931 AB529032 CU688340 BT007079 CR456825	-283336	+	TSC_hg19_v1_chr2_+_207308286 AB009672 NM_003812 BC132763 BC132765	339	+	AK129906 TSC_hg19_v1_chr2_+_207406857	98842	+	NM_001102659	199147	+	AK127271|ZDBF2|57683|zinc finger, DBF-type containing 2##NM_020923|ZDBF2|57683|zinc finger, DBF-type containing 2##AK312917|GPR1|2825|G protein-coupled receptor 1##BC067833|GPR1|2825|G protein-coupled receptor 1##AK290976|GPR1|2825|G protein-coupled receptor 1##NM_001098199|GPR1|2825|G protein-coupled receptor 1##NM_005279|GPR1|2825|G protein-coupled receptor 1##AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##D28350|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##AB009672|ADAM23|8745|ADAM metallopeptidase domain 23##NM_003812|ADAM23|8745|ADAM metallopeptidase domain 23##BC132763|ADAM23|8745|ADAM metallopeptidase domain 23##BC132765|ADAM23|8745|ADAM metallopeptidase domain 23##AK129906|ADAM23|8745|ADAM metallopeptidase domain 23##NM_001102659|LOC200726|200726|hCG1657980	0.0	
chr5	113754508	113754653	reg1035626.p1	3.619	+	BC117454 BC117456 AF397175 AY258141 TSC_hg19_v1_chr5_+_113698618	-56119	+	AF239613 NM_021614 TSC_hg19_v1_chr5_+_113698062 AK289948	-56531	+	TSC_hg19_v1_chr5_+_112849405 AK096486 NM_022828 AK310855 BC019100 BC137285	-905184	+	BC015371 NM_170775 BC040722	14669	+	TSC_hg19_v1_chr5_-_114505606 AK316422 AK296389	751024	-	AB196558 AJ272269 BC130334 AK125426 BC045164 BC046096 NM_001017397 NM_001017398 NM_018700	761407	-	BC117454|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC117456|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF397175|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AY258141|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AF239613|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_021614|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK289948|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK096486|YTHDC2|64848|YTH domain containing 2##NM_022828|YTHDC2|64848|YTH domain containing 2##AK310855|YTHDC2|64848|YTH domain containing 2##BC019100|YTHDC2|64848|YTH domain containing 2##BC137285|YTHDC2|64848|YTH domain containing 2##BC015371|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##NM_170775|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##BC040722|KCNN2|3781|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2##AK316422|TRIM36|55521|tripartite motif containing 36##AK296389|TRIM36|55521|tripartite motif containing 36##AB196558|TRIM36|55521|tripartite motif containing 36##AJ272269|TRIM36|55521|tripartite motif containing 36##BC130334|TRIM36|55521|tripartite motif containing 36##AK125426|TRIM36|55521|tripartite motif containing 36##BC045164|TRIM36|55521|tripartite motif containing 36##BC046096|TRIM36|55521|tripartite motif containing 36##NM_001017397|TRIM36|55521|tripartite motif containing 36##NM_001017398|TRIM36|55521|tripartite motif containing 36##NM_018700|TRIM36|55521|tripartite motif containing 36	0.0	
chr10	115802617	115802798	reg1031224.p1	3.618	+	TSC_hg19_v1_chr10_+_115614419 NM_198514 AK090631 AX746547	-188288	+	D42045 NM_014881 AK307187	-188791	-	BC037870 FJ236306 NM_182601	-278130	+	NM_000684 J03019	1102	+	TSC_hg19_v1_chr10_-_115933963 BC100670 BC103499 BC103504 BC105632 BC152306 BC107430 BC070368 BX537964 AK307517 AK092620 AX747632 BC020842 BC030557	131225	-	NM_018017	131656	-	NM_198514|NHLRC2|374354|NHL repeat containing 2##AK090631|NHLRC2|374354|NHL repeat containing 2##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A##BC037870|C10orf81|79949|chromosome 10 open reading frame 81##FJ236306|C10orf81|79949|chromosome 10 open reading frame 81##NM_182601|C10orf81|79949|chromosome 10 open reading frame 81##NM_000684|ADRB1|153|adrenergic, beta-1-, receptor##J03019|ADRB1|153|adrenergic, beta-1-, receptor##BC100670|C10orf118|55088|chromosome 10 open reading frame 118##BC103499|C10orf118|55088|chromosome 10 open reading frame 118##BC103504|C10orf118|55088|chromosome 10 open reading frame 118##BC105632|C10orf118|55088|chromosome 10 open reading frame 118##BC152306|C10orf118|55088|chromosome 10 open reading frame 118##BC107430|C10orf118|55088|chromosome 10 open reading frame 118##BC070368|C10orf118|55088|chromosome 10 open reading frame 118##BX537964|C10orf118|55088|chromosome 10 open reading frame 118##AK307517|C10orf118|55088|chromosome 10 open reading frame 118##AK092620|C10orf118|55088|chromosome 10 open reading frame 118##BC020842|C10orf118|55088|chromosome 10 open reading frame 118##BC030557|C10orf118|55088|chromosome 10 open reading frame 118##NM_018017|C10orf118|55088|chromosome 10 open reading frame 118	0.0	
chr10	46895557	46895667	reg1040976.p1	3.618	+	BC036539 AL050040 NM_001042363 NM_001042364 NM_001042365 NM_001042387 NM_001042395 NM_001042396 NM_001042397 NM_015605 CR933668 BX648913	-254591	-	AY704141 AY704142 AY704143 AY704144 AY704145 AY704147 AY704148 AY704150 AY704152 AY704153 AY704154 AY704156 AY704157 AY704158 NM_001042358 NM_001042359 NM_001042360 NM_001042361 NM_001042362 NM_001042390 NM_001042391 NM_001042392 NM_001042393 NM_001042394 AY753191	-254924	-	AB464105 AY704146 AY704149 AY704151 AY704155 BC093750 BC113473 BC143394 BC171725 NM_001042357 NM_001042389	-275616	-	BC139914 AK290186 TSC_hg19_v1_chr10_-_46970538	74898	-	TSC_hg19_v1_chr10_-_46970597 AK131036 AK293632 NM_031912 NM_181519	74988	-	BC011672 NM_014696	97933	+	BC036539|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AL050040|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042363|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042364|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042365|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042387|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042395|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042396|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042397|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_015605|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##CR933668|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BX648913|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704141|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704142|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704143|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704144|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704145|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704147|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704148|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704150|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704152|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704153|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704154|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704156|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704157|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704158|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042358|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042359|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042360|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042361|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042362|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042390|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042391|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042392|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042393|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##NM_001042394|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##AY753191|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704146|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704149|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704151|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##AY704155|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC093750|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC113473|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC143394|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##BC171725|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042357|PTPN20B|26095|protein tyrosine phosphatase, non-receptor type 20B##NM_001042389|PTPN20A|653129|protein tyrosine phosphatase, non-receptor type 20A##BC139914|SYT15|83849|synaptotagmin XV##AK290186|SYT15|83849|synaptotagmin XV##AK131036|SYT15|83849|synaptotagmin XV##AK293632|SYT15|83849|synaptotagmin XV##NM_031912|SYT15|83849|synaptotagmin XV##NM_181519|SYT15|83849|synaptotagmin XV##BC011672|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##NM_014696|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2	0.043077	
chr12	75882462	75882555	reg1035137.p1	3.618	+	NM_006851 TSC_hg19_v1_chr12_+_75874534 AK304847 X91911 BC005227 U16307 BC012510 AF400440 AK313449 CU680346 AB529136 EF667354	-7922	+	TSC_hg19_v1_chr12_+_75784878 BX640916 BC029557 NM_152436 DQ891533 DQ894722	-97623	+	BC016749 AK093175 AX747973 TSC_hg19_v1_chr12_+_75784869	-97649	+	CU689792 DQ893552 DQ893553 DQ893554 DQ896515 EF010919 TSC_hg19_v1_chr12_-_75905381 AK297602 AK313687	22870	-	AK022133 TSC_hg19_v1_chr12_-_75905382 BC016778 U55766	22877	-	BC033887 TSC_hg19_v1_chr12_-_75905393 BC014034 BC026107	22887	-	NM_006851|GLIPR1|11010|GLI pathogenesis-related 1##AK304847|GLIPR1|11010|GLI pathogenesis-related 1##X91911|GLIPR1|11010|GLI pathogenesis-related 1##BC005227|GLIPR1|11010|GLI pathogenesis-related 1##U16307|GLIPR1|11010|GLI pathogenesis-related 1##BC012510|GLIPR1|11010|GLI pathogenesis-related 1##AF400440|GLIPR1|11010|GLI pathogenesis-related 1##AK313449|GLIPR1|11010|GLI pathogenesis-related 1##EF667354|GLIPR1|11010|GLI pathogenesis-related 1##BX640916|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##BC029557|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##NM_152436|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ891533|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ894722|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##DQ893552|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ893553|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ893554|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##DQ896515|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##EF010919|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK297602|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK313687|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##AK022133|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC016778|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##U55766|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC033887|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC014034|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)##BC026107|KRR1|11103|KRR1, small subunit (SSU) processome component, homolog (yeast)	0.997174	CTCF.p2:13:0.997
chr14	74761104	74761211	reg1037818.p1	3.618	+	AY336059 NM_182894 BC128153	-54961	+	NM_001024674 AK307062 TSC_hg19_v1_chr14_+_74551662 AK055422 AK023979 BC009539	-209489	+	TSC_hg19_v1_chr14_-_74551167 BC032371 NM_005589	-209968	-	BT007412 CR457104 DQ892847 DQ896094 BC012815 TSC_hg19_v1_chr14_-_74769638 AK291332 AK308382 AF009746 AK297934 BX247984 BX248053 NM_005050	8533	-	NM_018228 TSC_hg19_v1_chr14_+_74815173	54012	+	BC053325 AK023213 TSC_hg19_v1_chr14_+_74815209 AK001673	54045	+	AY336059|VSX2|338917|visual system homeobox 2##NM_182894|VSX2|338917|visual system homeobox 2##BC128153|VSX2|338917|visual system homeobox 2##NM_001024674|LIN52|91750|lin-52 homolog (C. elegans)##AK307062|LIN52|91750|lin-52 homolog (C. elegans)##AK055422|LIN52|91750|lin-52 homolog (C. elegans)##AK023979|LIN52|91750|lin-52 homolog (C. elegans)##BC009539|LIN52|91750|lin-52 homolog (C. elegans)##BC032371|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##NM_005589|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##BT007412|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##CR457104|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ892847|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ896094|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BC012815|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK291332|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK308382|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AF009746|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK297934|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX247984|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX248053|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_005050|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_018228|VRTN|55237|vertebrae development homolog (pig)##BC053325|VRTN|55237|vertebrae development homolog (pig)##AK023213|VRTN|55237|vertebrae development homolog (pig)##AK001673|VRTN|55237|vertebrae development homolog (pig)	0.975364	CTCF.p2:-14:0.975
chr15	75082548	75082626	reg1030686.p2	3.618	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	-7731	+	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	-8162	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-41395	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	22585	+	AK024055 NM_001030005 AB072900 BC018026 AY286501	36403	+	TSC_hg19_v1_chr15_-_75135477 AB528889 CU691158 AK075047 BC056423 AK299380	52866	-	X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like##AK024055|CPLX3|594855|complexin 3##NM_001030005|CPLX3|594855|complexin 3##AB072900|CPLX3|594855|complexin 3##BC018026|CPLX3|594855|complexin 3##AY286501|CPLX3|594855|complexin 3##AK075047|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC056423|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK299380|ULK3|25989|unc-51-like kinase 3 (C. elegans)	0.0	
chr16	30366793	30366971	reg1038149.p2	3.618	+	NM_006110 TSC_hg19_v1_chr16_-_30366682	-200	-	AK315708 TSC_hg19_v1_chr16_-_30366603 BC000495 BC001947 AF104222	-282	-	BC013854 NM_001243646	-628	-	TSC_hg19_v1_chr16_-_30381505 AB527435 BC015680 NM_015527	14642	-	AK314082 M21812 X57543 BC012571 BX649054 NM_013292 TSC_hg19_v1_chr16_+_30386122 AF363061	19228	+	NM_001214906 NM_001214907	22751	+	NM_006110|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##AK315708|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##BC000495|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##BC001947|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##AF104222|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##BC013854|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##NM_001243646|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##NM_015527|TBC1D10B|26000|TBC1 domain family, member 10B##AK314082|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##M21812|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##X57543|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##BC012571|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##BX649054|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##NM_013292|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##AF363061|MYLPF|29895|myosin light chain, phosphorylatable, fast skeletal muscle##NM_001214906|ZNF48|197407|zinc finger protein 48##NM_001214907|ZNF48|197407|zinc finger protein 48	0.0	
chr1	90941327	90941447	reg1041057.p1	3.618	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	-480671	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-653823	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-653929	+	BC126439 BC126441 AY338397 NM_020063	241398	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	545651	-	TSC_hg19_v1_chr1_-_91487583 BC041138 AK291520	546176	-	NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644##BC041138|ZNF644|84146|zinc finger protein 644##AK291520|ZNF644|84146|zinc finger protein 644	0.0	
chr20	50077468	50077648	reg1035984.p1	3.618	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	-437901	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-502190	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-502495	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	81581	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	81717	-	EU887574 EU887577 NM_001136021	101609	-	BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.013391	
chr2	12003528	12003708	reg1002033.p1	3.618	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-116843	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-193327	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-320775	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	853635	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	854298	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	854779	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.0	
chr2	46456754	46456922	reg1025991.p1	3.618	+	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	-577764	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-618431	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-661710	-	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	67753	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	68137	+	NM_001145051	249865	+	AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1##NM_001145051|LOC388946|388946|transmembrane protein ENSP00000343375	0.0	
chr3	17236624	17236743	reg1037635.p1	3.618	+	BC036392 NM_015184	-262102	+	AB029015 NM_001144382	-310232	+	U65918 U66726 U66078 BC027595 NM_001351	-589717	-	AK310539 NM_001134381	504828	-	D86965 NM_014744	545715	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	547484	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.010176	
chr6	121640290	121640388	reg1026175.p1	3.618	+	TSC_hg19_v1_chr6_-_119670927 BC065827 AK025599 AK307383 NM_005907	-1969418	-	BX538186 AK091682 AX747126 NM_001100411	-2169993	-	TSC_hg19_v1_chr6_-_119399821 BC060769 NM_024581 AK308316	-2240431	-	TSC_hg19_v1_chr6_-_121655627 AK131446 AK091554 AX747057 NM_152730	15304	-	NM_000165 AK312324 AK297764 AK223289 AK294670 AK297402 TSC_hg19_v1_chr6_+_121756792 AK309377 AK316159 AK295460 AK297761 AK309490 M65188 X52947 BC026329	116486	+	TSC_hg19_v1_chr6_+_122720699 NM_001135564 NM_001243094 NM_004506	1080356	+	BC065827|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK025599|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##AK307383|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##NM_005907|MAN1A1|4121|mannosidase, alpha, class 1A, member 1##BX538186|FAM184A|79632|family with sequence similarity 184, member A##AK091682|FAM184A|79632|family with sequence similarity 184, member A##NM_001100411|FAM184A|79632|family with sequence similarity 184, member A##BC060769|FAM184A|79632|family with sequence similarity 184, member A##NM_024581|FAM184A|79632|family with sequence similarity 184, member A##AK308316|FAM184A|79632|family with sequence similarity 184, member A##AK131446|C6orf170|221322|chromosome 6 open reading frame 170##AK091554|C6orf170|221322|chromosome 6 open reading frame 170##NM_152730|C6orf170|221322|chromosome 6 open reading frame 170##NM_000165|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK312324|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297764|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK223289|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK294670|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309377|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK295460|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK297761|GJA1|2697|gap junction protein, alpha 1, 43kDa##AK309490|GJA1|2697|gap junction protein, alpha 1, 43kDa##M65188|GJA1|2697|gap junction protein, alpha 1, 43kDa##X52947|GJA1|2697|gap junction protein, alpha 1, 43kDa##BC026329|GJA1|2697|gap junction protein, alpha 1, 43kDa##NM_001135564|HSF2|3298|heat shock transcription factor 2##NM_001243094|HSF2|3298|heat shock transcription factor 2##NM_004506|HSF2|3298|heat shock transcription factor 2	0.08488	
chr7	100751955	100752086	reg1032501.p2	3.618	+	BC005847 TSC_hg19_v1_chr7_+_100728767 AK092927 AX747810 BC048194 NM_030961 BC011882	-23260	+	TSC_hg19_v1_chr7_+_100663360 AJ606307 AJ606308 NM_001040105	-88655	+	NM_001164462	-139117	+	NM_000602 NM_001165413 TSC_hg19_v1_chr7_+_100770384 AK293248 AK297728 AK298048 AK316225 BC020765 X04729 BC010860 X04429 X12701 BC005927 M16006	18394	+	NM_001283 TSC_hg19_v1_chr7_+_100797756 AK312151 BC003561 AB015319	45708	+	BC063835 BC044212 TSC_hg19_v1_chr7_-_100808851 AK225839 NM_003378 BC036537	56832	-	BC005847|TRIM56|81844|tripartite motif containing 56##BC048194|TRIM56|81844|tripartite motif containing 56##NM_030961|TRIM56|81844|tripartite motif containing 56##BC011882|TRIM56|81844|tripartite motif containing 56##AJ606307|MUC17|140453|mucin 17, cell surface associated##AJ606308|MUC17|140453|mucin 17, cell surface associated##NM_001040105|MUC17|140453|mucin 17, cell surface associated##NM_001164462|MUC12|10071|mucin 12, cell surface associated##NM_000602|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001165413|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK293248|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK297728|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK298048|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##AK316225|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC020765|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04729|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC010860|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X04429|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##X12701|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##BC005927|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##M16006|SERPINE1|5054|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1##NM_001283|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AK312151|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC003561|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##AB015319|AP1S1|1174|adaptor-related protein complex 1, sigma 1 subunit##BC063835|VGF|7425|VGF nerve growth factor inducible##BC044212|VGF|7425|VGF nerve growth factor inducible##AK225839|VGF|7425|VGF nerve growth factor inducible##NM_003378|VGF|7425|VGF nerve growth factor inducible##BC036537|VGF|7425|VGF nerve growth factor inducible	0.0	
chr7	127229052	127229169	reg1040321.p2	3.618	+	NM_001662 TSC_hg19_v1_chr7_+_127228469 AK307297 AK308548 BC033104 M57567 AK297026 AK312107 BC003043 AB528679 AF493884 BT007087	-632	+	BC014100 NM_024523 TSC_hg19_v1_chr7_-_127225654	-3438	-	AF525417 AK315472 BC078665 TSC_hg19_v1_chr7_-_127225651	-3571	-	AF281049 NM_020369 AK225867 AK300518 AK301765 AK314050 BC035606 DQ892069 DQ895262 CU690130	4687	+	AB528989 EU446646 BC074761 BC107149 BC107150 AF043978 NM_006193	26566	-	TSC_hg19_v1_chr7_+_127292198 NM_014390	63072	+	NM_001662|ARF5|381|ADP-ribosylation factor 5##AK307297|ARF5|381|ADP-ribosylation factor 5##AK308548|ARF5|381|ADP-ribosylation factor 5##BC033104|ARF5|381|ADP-ribosylation factor 5##M57567|ARF5|381|ADP-ribosylation factor 5##AK297026|ARF5|381|ADP-ribosylation factor 5##AK312107|ARF5|381|ADP-ribosylation factor 5##BC003043|ARF5|381|ADP-ribosylation factor 5##AF493884|ARF5|381|ADP-ribosylation factor 5##BT007087|ARF5|381|ADP-ribosylation factor 5##BC014100|GCC1|79571|GRIP and coiled-coil domain containing 1##NM_024523|GCC1|79571|GRIP and coiled-coil domain containing 1##AF525417|GCC1|79571|GRIP and coiled-coil domain containing 1##AK315472|GCC1|79571|GRIP and coiled-coil domain containing 1##BC078665|GCC1|79571|GRIP and coiled-coil domain containing 1##AF281049|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##NM_020369|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##AK225867|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##AK300518|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##AK314050|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##BC035606|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##DQ892069|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##DQ895262|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##EU446646|PAX4|5078|paired box 4##BC074761|PAX4|5078|paired box 4##BC107149|PAX4|5078|paired box 4##BC107150|PAX4|5078|paired box 4##AF043978|PAX4|5078|paired box 4##NM_006193|PAX4|5078|paired box 4##NM_014390|SND1|27044|staphylococcal nuclease and tudor domain containing 1	0.233153	CTCF.p2:-22:0.233
chr10	105138053	105138233	reg1037649.p1	3.617	+	AK291229 TSC_hg19_v1_chr10_+_105127732 NM_006951 X95525 BC136340 BC136348 BC052268 U80191 AK223615 U75309 AB464281	-10416	+	TSC_hg19_v1_chr10_-_105110898 AK309105	-27241	-	BC010235 NM_001011663 NM_032154 TSC_hg19_v1_chr10_-_105110895	-27250	-	TSC_hg19_v1_chr10_-_105156222 AL110185 AK311888 BC091507 BC072683 BC007087 AJ272056 NM_001206426 NM_001206427 NM_032747	18084	-	AK293772 AK294971 TSC_hg19_v1_chr10_+_105156399 AK307418 BC049838 NM_014976	18254	+	TSC_hg19_v1_chr10_+_105156421 BC064486 BC080560	18275	+	AK291229|TAF5|6877|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa##NM_006951|TAF5|6877|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa##X95525|TAF5|6877|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa##BC136340|TAF5|6877|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa##BC136348|TAF5|6877|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa##BC052268|TAF5|6877|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa##U80191|TAF5|6877|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa##AK223615|TAF5|6877|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa##U75309|TAF5|6877|TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa##AK309105|PCGF6|84108|polycomb group ring finger 6##BC010235|PCGF6|84108|polycomb group ring finger 6##NM_001011663|PCGF6|84108|polycomb group ring finger 6##NM_032154|PCGF6|84108|polycomb group ring finger 6##AL110185|USMG5|84833|up-regulated during skeletal muscle growth 5 homolog (mouse)##AK311888|USMG5|84833|up-regulated during skeletal muscle growth 5 homolog (mouse)##BC091507|USMG5|84833|up-regulated during skeletal muscle growth 5 homolog (mouse)##BC072683|USMG5|84833|up-regulated during skeletal muscle growth 5 homolog (mouse)##BC007087|USMG5|84833|up-regulated during skeletal muscle growth 5 homolog (mouse)##AJ272056|USMG5|84833|up-regulated during skeletal muscle growth 5 homolog (mouse)##NM_001206426|USMG5|84833|up-regulated during skeletal muscle growth 5 homolog (mouse)##NM_001206427|USMG5|84833|up-regulated during skeletal muscle growth 5 homolog (mouse)##NM_032747|USMG5|84833|up-regulated during skeletal muscle growth 5 homolog (mouse)##AK294971|PDCD11|22984|programmed cell death 11##AK307418|PDCD11|22984|programmed cell death 11##BC049838|PDCD11|22984|programmed cell death 11##NM_014976|PDCD11|22984|programmed cell death 11##BC064486|PDCD11|22984|programmed cell death 11##BC080560|PDCD11|22984|programmed cell death 11	0.0	
chr11	121108174	121108249	reg1035465.p2	3.617	+	NM_005422	-134837	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	-213401	+	AB384776 NM_014619 S67803	-577184	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	55194	+	TSC_hg19_v1_chr11_+_121163484 AK096847 AK223141 AK222686	55271	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	55343	+	NM_005422|TECTA|7007|tectorin alpha##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK096847|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK223141|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK222686|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like	0.270855	CTCF.p2:-3:0.271
chr1	204593278	204593389	reg1032240.p1	3.617	+	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	-107723	+	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	-107831	+	TSC_hg19_v1_chr1_-_204463934 BC094741	-129568	-	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	61258	-	TSC_hg19_v1_chr1_+_204797779 BC040674 NM_001005388 NM_001005389 NM_001160332 NM_001160333 NM_015090 AK295291 AK299262 AK090639 AX746553	204479	+	TSC_hg19_v1_chr1_+_204839989 AK308686	246650	+	AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2##BC040674|NFASC|23114|neurofascin##NM_001005388|NFASC|23114|neurofascin##NM_001005389|NFASC|23114|neurofascin##NM_001160332|NFASC|23114|neurofascin##NM_001160333|NFASC|23114|neurofascin##NM_015090|NFASC|23114|neurofascin##AK295291|NFASC|23114|neurofascin##AK299262|NFASC|23114|neurofascin##AK090639|NFASC|23114|neurofascin##AK308686|NFASC|23114|neurofascin	0.834391	CTCF.p2:-33:0.834
chr1	226896756	226896851	reg1036036.p1	3.617	+	AM393750 BC141659 TSC_hg19_v1_chr1_+_226736630	-160186	+	AL137507 NM_001003665 TSC_hg19_v1_chr1_+_226736500	-160302	+	TSC_hg19_v1_chr1_-_226595798 NM_001618	-301000	-	BC015009 NM_002221 TSC_hg19_v1_chr1_-_226926982	30135	-	TSC_hg19_v1_chr1_+_227058316 NM_000447 NM_012486 AK292299 AK301143	161477	+	NM_020247 TSC_hg19_v1_chr1_+_227127955	231143	+	AM393750|C1orf95|375057|chromosome 1 open reading frame 95##BC141659|C1orf95|375057|chromosome 1 open reading frame 95##AL137507|C1orf95|375057|chromosome 1 open reading frame 95##NM_001003665|C1orf95|375057|chromosome 1 open reading frame 95##NM_001618|PARP1|142|poly (ADP-ribose) polymerase 1##BC015009|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_002221|ITPKB|3707|inositol-trisphosphate 3-kinase B##NM_000447|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_012486|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK292299|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##AK301143|PSEN2|5664|presenilin 2 (Alzheimer disease 4)##NM_020247|ADCK3|56997|aarF domain containing kinase 3	0.804929	CTCF.p2:-70:0.777
chr1	25232965	25233108	reg1037024.p1	3.617	+	TSC_hg19_v1_chr1_+_25071976 AF109196 AB463494 AM393644 CU680328 CR533501	-161031	+	TSC_hg19_v1_chr1_+_25071937 AK315051 AK301466 AK307142	-161103	+	NM_013943 TSC_hg19_v1_chr1_+_25071875 AL117424 AK001624 AK095959 BC012444 AF097330	-161205	+	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	23389	-	TSC_hg19_v1_chr1_-_25256761 AK301044	23703	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	23750	-	AF109196|CLIC4|25932|chloride intracellular channel 4##AM393644|CLIC4|25932|chloride intracellular channel 4##CR533501|CLIC4|25932|chloride intracellular channel 4##AK315051|CLIC4|25932|chloride intracellular channel 4##AK301466|CLIC4|25932|chloride intracellular channel 4##AK307142|CLIC4|25932|chloride intracellular channel 4##NM_013943|CLIC4|25932|chloride intracellular channel 4##AL117424|CLIC4|25932|chloride intracellular channel 4##AK001624|CLIC4|25932|chloride intracellular channel 4##AK095959|CLIC4|25932|chloride intracellular channel 4##BC012444|CLIC4|25932|chloride intracellular channel 4##AF097330|CLIC4|25932|chloride intracellular channel 4##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3	0.0	
chr12	55378516	55378688	reg1032339.p2	3.617	+	AK303223 NM_001136030 TSC_hg19_v1_chr12_-_55378533	-100	-	BC132732 BC132734 NM_001098815	-2981	-	NM_058173 AF414087 AY359062 BC111421 AY651259	-130270	+	NM_021191 AK314136	35168	+	BC136988 NM_001005243	144906	+	AB529271 NM_001005280	236206	+	AK303223|KIAA0748|9840|KIAA0748##NM_001136030|KIAA0748|9840|KIAA0748##BC132732|KIAA0748|9840|KIAA0748##BC132734|KIAA0748|9840|KIAA0748##NM_001098815|KIAA0748|9840|KIAA0748##NM_058173|MUCL1|118430|mucin-like 1##AF414087|MUCL1|118430|mucin-like 1##AY359062|MUCL1|118430|mucin-like 1##BC111421|MUCL1|118430|mucin-like 1##AY651259|MUCL1|118430|mucin-like 1##NM_021191|NEUROD4|58158|neurogenic differentiation 4##AK314136|NEUROD4|58158|neurogenic differentiation 4##BC136988|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005243|OR9K2|441639|olfactory receptor, family 9, subfamily K, member 2##NM_001005280|OR10A7|121364|olfactory receptor, family 10, subfamily A, member 7	0.0	
chr12	63013727	63013803	reg1041909.p1	3.617	+	BC136288 AK098456 NM_175895	-16555	-	AK022671 TSC_hg19_v1_chr12_+_62954346	-59454	+	BC042679 AB017814 AB384555 TSC_hg19_v1_chr12_+_62861012	-152850	+	TSC_hg19_v1_chr12_-_63328666 NM_020700 BC157843	314940	-	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	315160	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	530906	-	BC136288|C12orf61|283416|chromosome 12 open reading frame 61##AK098456|C12orf61|283416|chromosome 12 open reading frame 61##NM_175895|C12orf61|283416|chromosome 12 open reading frame 61##AK022671|MON2|23041|MON2 homolog (S. cerevisiae)##AB017814|MON2|23041|MON2 homolog (S. cerevisiae)##NM_020700|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC157843|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A	0.0	
chr14	95962025	95962191	reg1035937.p2	3.617	+	AK131436 BC146604 BX248076 NM_152592	-20004	-	AL117526 TSC_hg19_v1_chr14_-_95786246 AK025226 BC068482 AB047979 AK314315 NM_024734	-175925	-	TSC_hg19_v1_chr14_+_95624023 BC040596	-338087	+	TSC_hg19_v1_chr14_-_96000962 BC036576 AK097876	38907	-	TSC_hg19_v1_chr14_+_96001352 NM_016417	39218	+	TSC_hg19_v1_chr14_+_96001362 BX248075 BC023528 BC047680	39260	+	AK131436|C14orf49|161176|chromosome 14 open reading frame 49##BC146604|C14orf49|161176|chromosome 14 open reading frame 49##BX248076|C14orf49|161176|chromosome 14 open reading frame 49##NM_152592|C14orf49|161176|chromosome 14 open reading frame 49##AL117526|CLMN|79789|calmin (calponin-like, transmembrane)##AK025226|CLMN|79789|calmin (calponin-like, transmembrane)##BC068482|CLMN|79789|calmin (calponin-like, transmembrane)##AB047979|CLMN|79789|calmin (calponin-like, transmembrane)##AK314315|CLMN|79789|calmin (calponin-like, transmembrane)##NM_024734|CLMN|79789|calmin (calponin-like, transmembrane)##BC040596|DICER1-AS|400242|DICER1 antisense RNA (non-protein coding)##BC036576|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##AK097876|SNHG10|283596|small nucleolar RNA host gene 10 (non-protein coding)##NM_016417|GLRX5|51218|glutaredoxin 5##BX248075|GLRX5|51218|glutaredoxin 5##BC023528|GLRX5|51218|glutaredoxin 5##BC047680|GLRX5|51218|glutaredoxin 5	0.0	
chr18	63928119	63928299	reg1041288.p2	3.617	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-510007	+	TSC_hg19_v1_chr18_+_63417845 BC036786	-510343	+	AJ007611 NM_033646	-510722	+	AJ007607 NM_021153 AK304000 AK315257 BC015877	343102	-	AK021849 TSC_hg19_v1_chr18_-_65182656	1254374	-	TSC_hg19_v1_chr18_-_65183956 NM_032160	1255737	-	AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AK021849|DSEL|92126|dermatan sulfate epimerase-like##NM_032160|DSEL|92126|dermatan sulfate epimerase-like	0.0	
chr2	192096806	192096898	reg1044515.p1	3.617	+	BC031212 EU304789 EU304792 EU304793 NM_001243835	-80545	-	TSC_hg19_v1_chr2_-_192015965 NM_003151	-80893	-	L78440 TSC_hg19_v1_chr2_-_192015772 AK301172	-81083	-	TSC_hg19_v1_chr2_+_192110129 NM_001130158 NM_012223 BC060849 BC053558 NM_001161819	13246	+	NM_001031716 AK026486 AL832659 BC107723 TSC_hg19_v1_chr2_+_192542861	446010	+	CU677635 DQ891440 DQ894617 AB590258 TSC_hg19_v1_chr2_-_192711811 BC016475 AF085481 AK311055 AK026943	614886	-	BC031212|STAT4|6775|signal transducer and activator of transcription 4##EU304789|STAT4|6775|signal transducer and activator of transcription 4##EU304792|STAT4|6775|signal transducer and activator of transcription 4##EU304793|STAT4|6775|signal transducer and activator of transcription 4##NM_001243835|STAT4|6775|signal transducer and activator of transcription 4##NM_003151|STAT4|6775|signal transducer and activator of transcription 4##L78440|STAT4|6775|signal transducer and activator of transcription 4##AK301172|STAT4|6775|signal transducer and activator of transcription 4##NM_001130158|MYO1B|4430|myosin IB##NM_012223|MYO1B|4430|myosin IB##BC060849|MYO1B|4430|myosin IB##BC053558|MYO1B|4430|myosin IB##NM_001161819|MYO1B|4430|myosin IB##NM_001031716|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AK026486|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##AL832659|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##BC107723|OBFC2A|64859|oligonucleotide/oligosaccharide-binding fold containing 2A##DQ891440|SDPR|8436|serum deprivation response##DQ894617|SDPR|8436|serum deprivation response##BC016475|SDPR|8436|serum deprivation response##AF085481|SDPR|8436|serum deprivation response##AK026943|SDPR|8436|serum deprivation response	0.0	
chr2	42949757	42949937	reg1038293.p1	3.617	+	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	-153950	+	TSC_hg19_v1_chr2_+_42795781 BC053631 NM_020744 BC004227	-154126	+	TSC_hg19_v1_chr2_+_42721701 AK127245	-228145	+	AY158687 AB528920 AB083055 BC063549 NM_148962	41453	-	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	69904	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	503498	-	AK027304|MTA3|57504|metastasis associated 1 family, member 3##BC053631|MTA3|57504|metastasis associated 1 family, member 3##NM_020744|MTA3|57504|metastasis associated 1 family, member 3##BC004227|MTA3|57504|metastasis associated 1 family, member 3##AK127245|MTA3|57504|metastasis associated 1 family, member 3##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2	0.0	
chr6	107397201	107397305	reg1034272.p2	3.617	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	-47781	+	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	-319756	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	-319973	-	BC131628 NM_001080450	38382	-	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	383477	-	TSC_hg19_v1_chr6_+_107811320 NM_018013 BC014859	414175	+	NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203##NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_018013|SOBP|55084|sine oculis binding protein homolog (Drosophila)##BC014859|SOBP|55084|sine oculis binding protein homolog (Drosophila)	0.968504	CTCF.p2:-10:0.969
chr10	64564503	64564684	reg1024822.p3	3.616	+	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	-51	+	AJ505150 NM_199452	-284387	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-430550	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	64	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	11504	-	TSC_hg19_v1_chr10_-_64576127 NM_000399 NM_001136177 NM_001136179	11554	-	AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2##NM_000399|EGR2|1959|early growth response 2##NM_001136177|EGR2|1959|early growth response 2##NM_001136179|EGR2|1959|early growth response 2	0.0	
chr11	90433988	90434154	reg1030344.p1	3.616	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-449661	+	AK290231 NM_001144073 NM_012124	-477540	-	CU687242 BC002339 BC072461 TSC_hg19_v1_chr11_-_89956218 AF192466 AK226099 AK225565 AK312663 AF123249 AK225365	-477869	-	NM_001008781	1651190	+	BC069163 NM_005959 U25341 AY521019	2268768	+	TSC_hg19_v1_chr11_-_92930978 CU690400	2496916	-	AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC002339|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC072461|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF192466|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK226099|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225565|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK312663|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AF123249|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##AK225365|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B	0.0	
chr12	9620867	9620961	reg1031445.p1	3.616	+	TSC_hg19_v1_chr12_-_9600810 BC035635 BC128040 BC111733	-20116	-	TSC_hg19_v1_chr12_+_9436619 AK123583 AK309820	-184289	+	BC111756 AK313639 NM_002864 X54380	-259952	-	BC027885 BC113997 BC114516 U11276 NM_002258 AK292022	139582	-	TSC_hg19_v1_chr12_+_9800760 AK096274	179982	+	BC063128 NM_001197318 NM_013269 AK310150 NM_001004419 AK310554 AK313554 BC019883 AF133299 AF285087 CU676474 FN813349 FN813350 FN813351 NM_001197317 NM_001197319	201353	+	BC035635|DDX12P|440081|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12, pseudogene##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK309820|LOC642846|642846|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like##BC111756|PZP|5858|pregnancy-zone protein##AK313639|PZP|5858|pregnancy-zone protein##NM_002864|PZP|5858|pregnancy-zone protein##X54380|PZP|5858|pregnancy-zone protein##BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK096274|LOC374443|374443|CLR pseudogene##BC063128|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D##NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D##AK310150|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D##AK310554|CLEC2D|29121|C-type lectin domain family 2, member D##AK313554|CLEC2D|29121|C-type lectin domain family 2, member D##BC019883|CLEC2D|29121|C-type lectin domain family 2, member D##AF133299|CLEC2D|29121|C-type lectin domain family 2, member D##AF285087|CLEC2D|29121|C-type lectin domain family 2, member D##FN813349|CLEC2D|29121|C-type lectin domain family 2, member D##FN813350|CLEC2D|29121|C-type lectin domain family 2, member D##FN813351|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D	0.996681	CTCF.p2:-5:0.997
chr14	54348351	54348489	reg1038801.p1	3.616	+	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-728370	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-728452	-	TSC_hg19_v1_chr14_-_53619887 AK125372	-728547	-	NM_130851	72849	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	75113	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	515301	+	NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##AK125372|DDHD1|80821|DDHD domain containing 1##NM_130851|BMP4|652|bone morphogenetic protein 4##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3	0.0	
chr2	111812911	111813073	reg1027580.p2	3.616	+	AK300513 NM_001142807 BC022268	-322813	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-377170	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-377349	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	65495	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	828634	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	828769	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.026138	
chr2	139339879	139339946	reg1045931.p2	3.616	+	TSC_hg19_v1_chr2_+_139259500 AK021919	-80422	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-80519	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	-617978	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	197894	-	TSC_hg19_v1_chr2_-_142888540 AK054663	3548644	-	AF176832 NM_018557	3549357	-	NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B	0.0	
chr3	52029918	52030026	reg1036290.p1	3.616	+	BC008926 NM_000992 TSC_hg19_v1_chr3_-_52029968	-9	-	TSC_hg19_v1_chr3_-_52029912 BC070190 AK289538 AK311884 D28412	-59	-	TSC_hg19_v1_chr3_-_52029890 BC071663 U49083 U10248 Z49148 BC071909 BC070481	-91	-	X93921 TSC_hg19_v1_chr3_-_52090192 BC019107 AF508727 BC104880 BC104882 NM_001947	60303	-	TSC_hg19_v1_chr3_-_52188413 BC119692 AK075289 BC119693 AK315688	158458	-	BC110877 NM_001161580 NM_001161581 NM_015426	158733	-	BC008926|RPL29|6159|ribosomal protein L29##NM_000992|RPL29|6159|ribosomal protein L29##BC070190|RPL29|6159|ribosomal protein L29##AK289538|RPL29|6159|ribosomal protein L29##AK311884|RPL29|6159|ribosomal protein L29##D28412|RPL29|6159|ribosomal protein L29##BC071663|RPL29|6159|ribosomal protein L29##U49083|RPL29|6159|ribosomal protein L29##U10248|RPL29|6159|ribosomal protein L29##Z49148|RPL29|6159|ribosomal protein L29##BC071909|RPL29|6159|ribosomal protein L29##BC070481|RPL29|6159|ribosomal protein L29##X93921|DUSP7|1849|dual specificity phosphatase 7##BC019107|DUSP7|1849|dual specificity phosphatase 7##AF508727|DUSP7|1849|dual specificity phosphatase 7##BC104880|DUSP7|1849|dual specificity phosphatase 7##BC104882|DUSP7|1849|dual specificity phosphatase 7##NM_001947|DUSP7|1849|dual specificity phosphatase 7##BC119692|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK075289|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC119693|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK315688|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC110877|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161580|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161581|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_015426|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)	0.904374	CTCF.p2:92:0.904
chr5	131814460	131814541	reg1031199.p3	3.616	+	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-67872	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-108992	+	BX538252 TSC_hg19_v1_chr5_-_131705330	-109201	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	11981	-	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	64692	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	78140	+	AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BX538252|LOC553103|553103|uncharacterized LOC553103##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)	0.0	
chr6	168227351	168227441	reg1037126.p2	3.616	+	AB016901 BC027853 TSC_hg19_v1_chr6_-_168197551	-29856	-	BC068592 U03399 BC063451 BC033909 BC034995 NM_004610	-429439	-	AK093039 AK225984 AX747876 NM_031949 BC030650 AK301755 BC047411 AK314450 AY026506 CU688966 CU690408	-488779	+	TSC_hg19_v1_chr6_+_168227559 NM_001040000 NM_001207008 U02478 AB209420	270	+	AB016902 NM_001129895	150222	-	AB012722 NM_005355 NM_030615 BC130489	191170	+	AB016901|C6orf123|26238|chromosome 6 open reading frame 123##BC027853|C6orf123|26238|chromosome 6 open reading frame 123##BC068592|TCP10|6953|t-complex 10 homolog (mouse)##U03399|TCP10|6953|t-complex 10 homolog (mouse)##BC063451|TCP10|6953|t-complex 10 homolog (mouse)##NM_004610|TCP10|6953|t-complex 10 homolog (mouse)##AK093039|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK225984|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##NM_031949|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC030650|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK301755|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC047411|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK314450|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AY026506|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##NM_001040000|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##NM_001207008|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##U02478|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##AB209420|MLLT4|4301|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4##AB016902|HGC6.3|100128124|uncharacterized LOC100128124##NM_001129895|HGC6.3|100128124|uncharacterized LOC100128124##AB012722|KIF25|3834|kinesin family member 25##NM_005355|KIF25|3834|kinesin family member 25##NM_030615|KIF25|3834|kinesin family member 25##BC130489|KIF25|3834|kinesin family member 25	0.047801	
chr7	74988602	74988747	reg1039931.p2	3.616	+	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	-104	+	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	-121154	-	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	-480300	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	36291	+	AK126486 TSC_hg19_v1_chr7_+_75039644 BC044928 BC103750	50980	+	AB354586 TSC_hg19_v1_chr7_-_75072021	83337	-	AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC044928|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC103750|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AB354586|POM121C|100101267|POM121 membrane glycoprotein C	0.0	
chr10	43278110	43278234	reg1037843.p1	3.615	+	NM_014753	-219	+	TSC_hg19_v1_chr10_-_43187188 AK123067	-90982	-	TSC_hg19_v1_chr10_-_43134018 BC109232 BC160932 BC065181 BC107726 BC048313 AJ491697 NM_006955 AK096683 AK309564 AK304306 BC036398	-144174	-	TSC_hg19_v1_chr10_+_43278248 AK308420 BC043345	78	+	TSC_hg19_v1_chr10_+_43572516 NM_020630 NM_020975 BC003072 BC004257 X15262 AK291807 AB384817 CU678360 CU678648 Y12528	294431	+	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	355770	+	NM_014753|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC109232|ZNF33B|7582|zinc finger protein 33B##BC160932|ZNF33B|7582|zinc finger protein 33B##BC065181|ZNF33B|7582|zinc finger protein 33B##BC107726|ZNF33B|7582|zinc finger protein 33B##BC048313|ZNF33B|7582|zinc finger protein 33B##AJ491697|ZNF33B|7582|zinc finger protein 33B##NM_006955|ZNF33B|7582|zinc finger protein 33B##AK096683|ZNF33B|7582|zinc finger protein 33B##AK309564|ZNF33B|7582|zinc finger protein 33B##AK304306|ZNF33B|7582|zinc finger protein 33B##BC036398|ZNF33B|7582|zinc finger protein 33B##AK308420|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC043345|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##NM_020630|RET|5979|ret proto-oncogene##NM_020975|RET|5979|ret proto-oncogene##BC003072|RET|5979|ret proto-oncogene##BC004257|RET|5979|ret proto-oncogene##X15262|RET|5979|ret proto-oncogene##AK291807|RET|5979|ret proto-oncogene##Y12528|RET|5979|ret proto-oncogene##AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2	0.0	
chr1	177882972	177883058	reg1036891.p2	3.615	+	AB051534 AB161694 BC028036 NM_021165	-742434	+	AK296524 TSC_hg19_v1_chr1_+_177140093	-742937	+	TSC_hg19_v1_chr1_-_177134042 AK309094	-748940	-	AB063357 NM_033127 TSC_hg19_v1_chr1_-_177939202	56111	-	BC009106 TSC_hg19_v1_chr1_-_177939393	56355	-	TSC_hg19_v1_chr1_-_178007060 AK092831 BX538051 AB067515	124084	-	AB051534|FAM5B|57795|family with sequence similarity 5, member B##AB161694|FAM5B|57795|family with sequence similarity 5, member B##BC028036|FAM5B|57795|family with sequence similarity 5, member B##NM_021165|FAM5B|57795|family with sequence similarity 5, member B##AK296524|FAM5B|57795|family with sequence similarity 5, member B##AK309094|ASTN1|460|astrotactin 1##AB063357|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##NM_033127|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##BC009106|SEC16B|89866|SEC16 homolog B (S. cerevisiae)##AK092831|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene##BX538051|LOC730102|730102|quinone oxidoreductase-like protein 2 pseudogene	0.994268	CTCF.p2:0:0.994
chr12	92205804	92205887	reg1004454.p2	3.615	+	NM_001920	-629040	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-629265	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-632534	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	333798	-	AJ845165 AJ845166 NM_001025233	611889	+	AJ845168 NM_001025232	616078	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.0	
chr13	45492100	45492169	reg1035340.p2	3.615	+	TSC_hg19_v1_chr13_-_45150604 AB082525 NM_001243799 NM_183422	-341484	-	AK091854 AX747223 TSC_hg19_v1_chr13_-_45150467 BC136475 BC136482	-341704	-	NM_001243798	-443698	-	TSC_hg19_v1_chr13_-_45563607 AB528019 AF159548 BC001436 AK314242 NM_012345	71461	-	TSC_hg19_v1_chr13_+_45563672 AK304669 BC017776 BC039586 NM_018559 AK292493 AF145122 BC032333 AB051491	71590	+	TSC_hg19_v1_chr13_+_45694638 NM_004128 AK291545	202480	+	AB082525|TSC22D1|8848|TSC22 domain family, member 1##NM_001243799|TSC22D1|8848|TSC22 domain family, member 1##NM_183422|TSC22D1|8848|TSC22 domain family, member 1##AK091854|TSC22D1|8848|TSC22 domain family, member 1##BC136475|TSC22D1|8848|TSC22 domain family, member 1##BC136482|TSC22D1|8848|TSC22 domain family, member 1##NM_001243798|TSC22D1|8848|TSC22 domain family, member 1##AF159548|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##BC001436|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AK314242|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##NM_012345|NUFIP1|26747|nuclear fragile X mental retardation protein interacting protein 1##AK304669|KIAA1704|55425|KIAA1704##BC017776|KIAA1704|55425|KIAA1704##BC039586|KIAA1704|55425|KIAA1704##NM_018559|KIAA1704|55425|KIAA1704##AK292493|KIAA1704|55425|KIAA1704##AF145122|KIAA1704|55425|KIAA1704##BC032333|KIAA1704|55425|KIAA1704##AB051491|KIAA1704|55425|KIAA1704##NM_004128|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa##AK291545|GTF2F2|2963|general transcription factor IIF, polypeptide 2, 30kDa	0.0	
chr14	19642776	19642894	reg1032950.p1	3.615	+	AY462874 AY465171 AY465172 NM_001005356 BC127623	-89461	+	BC136730 BC136731 NM_001013354	-265278	+	None	None	None	AY462874 AY465172 NM_001145442	377436	-	NM_001197287	539655	-	AB463966 NM_172194	572751	+	AY462874|POTEG|404785|POTE ankyrin domain family, member G##AY465171|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##NM_001005356|POTEG|404785|POTE ankyrin domain family, member G##BC127623|POTEG|404785|POTE ankyrin domain family, member G##BC136730|OR11H12|440153|olfactory receptor, family 11, subfamily H, member 12##BC136731|OR11H12|440153|olfactory receptor, family 11, subfamily H, member 12##NM_001013354|OR11H12|440153|olfactory receptor, family 11, subfamily H, member 12##AY462874|POTEG|404785|POTE ankyrin domain family, member G##AY465172|POTEG|404785|POTE ankyrin domain family, member G##NM_001145442|POTEM|641455|POTE ankyrin domain family, member M##NM_001197287|OR11H2|79334|olfactory receptor, family 11, subfamily H, member 2##NM_172194|OR4Q3|441669|olfactory receptor, family 4, subfamily Q, member 3	0.141898	
chr1	54029990	54030081	reg1037025.p1	3.615	+	AK302085 TSC_hg19_v1_chr1_+_53925533 BC029566	-104505	+	AK057273 NM_033067 AJ291671	-104928	+	TSC_hg19_v1_chr1_-_53793743 NM_001018054 NM_004631 NM_017522 NM_033300	-236254	-	AK090634 AX746550 NM_147193	169841	-	DQ141696 AK302910 BX648031 TSC_hg19_v1_chr1_-_54304004 AK298909 AK295000	273939	-	AK001269 AL354612 AL354613 TSC_hg19_v1_chr1_-_54304168 BC003082 NM_001168551 NM_018087	274130	-	AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1##DQ141696|TMEM48|55706|transmembrane protein 48##AK302910|TMEM48|55706|transmembrane protein 48##BX648031|TMEM48|55706|transmembrane protein 48##AK298909|TMEM48|55706|transmembrane protein 48##AK295000|TMEM48|55706|transmembrane protein 48##AK001269|TMEM48|55706|transmembrane protein 48##AL354612|TMEM48|55706|transmembrane protein 48##AL354613|TMEM48|55706|transmembrane protein 48##BC003082|TMEM48|55706|transmembrane protein 48##NM_001168551|TMEM48|55706|transmembrane protein 48##NM_018087|TMEM48|55706|transmembrane protein 48	0.0	
chr1	54985518	54985636	reg1030698.p1	3.615	+	TSC_hg19_v1_chr1_-_54872087 NM_001009955	-113493	-	NM_018070 NM_145716 TSC_hg19_v1_chr1_-_54872066	-113555	-	CU688156 AK289474 BC003605 BC127866 BC066365 TSC_hg19_v1_chr1_-_54871828 AF500116	-113789	-	TSC_hg19_v1_chr1_+_55007956 AK091112	22384	+	NM_015547 NM_147161 TSC_hg19_v1_chr1_+_55013900 BC001517 AK023937 AK223570 AB014607 BC093844 BC093846 AF416921 AF416922	28317	+	CU676764 AY358629 BC015993 BC020874 NM_176782 AK091901 AX747244	103571	-	NM_001009955|SSBP3|23648|single stranded DNA binding protein 3##NM_018070|SSBP3|23648|single stranded DNA binding protein 3##NM_145716|SSBP3|23648|single stranded DNA binding protein 3##AK289474|SSBP3|23648|single stranded DNA binding protein 3##BC003605|SSBP3|23648|single stranded DNA binding protein 3##BC066365|SSBP3|23648|single stranded DNA binding protein 3##AF500116|SSBP3|23648|single stranded DNA binding protein 3##AK091112|ACOT11|26027|acyl-CoA thioesterase 11##NM_015547|ACOT11|26027|acyl-CoA thioesterase 11##NM_147161|ACOT11|26027|acyl-CoA thioesterase 11##BC001517|ACOT11|26027|acyl-CoA thioesterase 11##AK023937|ACOT11|26027|acyl-CoA thioesterase 11##AK223570|ACOT11|26027|acyl-CoA thioesterase 11##AB014607|ACOT11|26027|acyl-CoA thioesterase 11##BC093844|ACOT11|26027|acyl-CoA thioesterase 11##BC093846|ACOT11|26027|acyl-CoA thioesterase 11##AF416921|ACOT11|26027|acyl-CoA thioesterase 11##AF416922|ACOT11|26027|acyl-CoA thioesterase 11##AY358629|FAM151A|338094|family with sequence similarity 151, member A##BC015993|FAM151A|338094|family with sequence similarity 151, member A##BC020874|FAM151A|338094|family with sequence similarity 151, member A##NM_176782|FAM151A|338094|family with sequence similarity 151, member A##AK091901|FAM151A|338094|family with sequence similarity 151, member A	0.036032	
chr15	78077383	78077515	reg1040780.p1	3.615	+	TSC_hg19_v1_chr15_-_77924732 AK291363	-152669	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-152750	-	AK001601 TSC_hg19_v1_chr15_+_77713229 AK096546 AK223100 BC021959 NM_018200 AF146222 AL355736	-364187	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	292504	-	NM_001101404	307477	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	346313	-	AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AK001601|HMG20A|10363|high mobility group 20A##AK096546|HMG20A|10363|high mobility group 20A##AK223100|HMG20A|10363|high mobility group 20A##BC021959|HMG20A|10363|high mobility group 20A##NM_018200|HMG20A|10363|high mobility group 20A##AF146222|HMG20A|10363|high mobility group 20A##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2	0.866255	CTCF.p2:13:0.866
chr20	62580582	62580674	reg1032945.p1	3.615	+	TSC_hg19_v1_chr20_+_62526520 BC053642	-54104	+	AK289585 TSC_hg19_v1_chr20_+_62526490	-54138	+	TSC_hg19_v1_chr20_+_62526454 NM_025219	-54165	+	AK303688 NM_001193379	1874	-	TSC_hg19_v1_chr20_-_62587770 BC033078 AJ605558 AK000524 AK223220 AK301602 AK222559 NM_017859	7147	-	TSC_hg19_v1_chr20_-_62601275 BC125129 BC125128 NM_020713	20645	-	BC053642|DNAJC5|80331|DnaJ (Hsp40) homolog, subfamily C, member 5##AK289585|DNAJC5|80331|DnaJ (Hsp40) homolog, subfamily C, member 5##NM_025219|DNAJC5|80331|DnaJ (Hsp40) homolog, subfamily C, member 5##AK303688|UCKL1|54963|uridine-cytidine kinase 1-like 1##NM_001193379|UCKL1|54963|uridine-cytidine kinase 1-like 1##BC033078|UCKL1|54963|uridine-cytidine kinase 1-like 1##AJ605558|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK000524|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK223220|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK301602|UCKL1|54963|uridine-cytidine kinase 1-like 1##AK222559|UCKL1|54963|uridine-cytidine kinase 1-like 1##NM_017859|UCKL1|54963|uridine-cytidine kinase 1-like 1##BC125129|ZNF512B|57473|zinc finger protein 512B##BC125128|ZNF512B|57473|zinc finger protein 512B##NM_020713|ZNF512B|57473|zinc finger protein 512B	0.386506	CTCF.p2:51:0.307
chr2	109335790	109335970	reg1031532.p2	3.615	+	TSC_hg19_v1_chr2_+_109271492 AK302411 AK312178	-64392	+	AF527759 NM_001193485	-64613	+	TSC_hg19_v1_chr2_+_109237706 AK304260 NM_001193484 AF527760 AK310547	-98177	+	TSC_hg19_v1_chr2_+_109335970 D42063 NM_006267	58	+	TSC_hg19_v1_chr2_+_109384621 AY170822	48803	+	TSC_hg19_v1_chr2_+_109403228 BC050579 AK125199 AK057307 NM_144978 BC015847 BC038421	67322	+	AK302411|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK312178|LIMS3|96626|LIM and senescent cell antigen-like domains 3##AF527759|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193485|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK304260|LIMS1|3987|LIM and senescent cell antigen-like domains 1##NM_001193484|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AF527760|LIMS1|3987|LIM and senescent cell antigen-like domains 1##AK310547|LIMS1|3987|LIM and senescent cell antigen-like domains 1##D42063|RANBP2|5903|RAN binding protein 2##NM_006267|RANBP2|5903|RAN binding protein 2##AY170822|RANBP2|5903|RAN binding protein 2##BC050579|CCDC138|165055|coiled-coil domain containing 138##AK125199|CCDC138|165055|coiled-coil domain containing 138##AK057307|CCDC138|165055|coiled-coil domain containing 138##NM_144978|CCDC138|165055|coiled-coil domain containing 138##BC015847|CCDC138|165055|coiled-coil domain containing 138##BC038421|CCDC138|165055|coiled-coil domain containing 138	0.0	
chr22	21051701	21051881	reg1004930.p1	3.615	+	TSC_hg19_v1_chr22_+_20918811 U80745	-132967	+	BC017110 TSC_hg19_v1_chr22_+_20909388	-142484	+	AB463109 CU013137 CU013425 AF328769 TSC_hg19_v1_chr22_+_20861965	-189827	+	L36151 NM_002650	37163	-	TSC_hg19_v1_chr22_+_21128411 NM_000185 AK314200 AK225292 BC035028	76605	+	AB384703 TSC_hg19_v1_chr22_-_21213029 AK302424	161239	-	U80745|MED15|51586|mediator complex subunit 15##BC017110|MED15|51586|mediator complex subunit 15##CU013137|MED15|51586|mediator complex subunit 15##CU013425|MED15|51586|mediator complex subunit 15##AF328769|MED15|51586|mediator complex subunit 15##L36151|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_002650|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_000185|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK314200|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK225292|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##BC035028|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK302424|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha	0.0	
chr3	132445331	132445440	reg1037654.p1	3.615	+	AB082531 NM_153240 TSC_hg19_v1_chr3_-_132441315	-4077	-	TSC_hg19_v1_chr3_-_132441226 AY257864 BC131729 BC068082 AK055893	-4140	-	TSC_hg19_v1_chr3_+_132441069 BC039375 BC048124	-4258	+	NM_001136469 NM_023943 TSC_hg19_v1_chr3_+_132757202	311802	+	TSC_hg19_v1_chr3_+_132757234 AY358381 BC000568	311849	+	NM_003571 BC113518 BC113520 HQ258421 U48224	673473	+	AB082531|NPHP3-ACAD11|100532724|NPHP3-ACAD11 readthrough##NM_153240|NPHP3|27031|nephronophthisis 3 (adolescent)##AY257864|NPHP3|27031|nephronophthisis 3 (adolescent)##BC131729|NPHP3|27031|nephronophthisis 3 (adolescent)##BC068082|NPHP3|27031|nephronophthisis 3 (adolescent)##AK055893|NPHP3|27031|nephronophthisis 3 (adolescent)##BC039375|NPHP3-AS1|348808|NPHP3 antisense RNA 1 (non-protein coding)##BC048124|NPHP3-AS1|348808|NPHP3 antisense RNA 1 (non-protein coding)##NM_001136469|TMEM108|66000|transmembrane protein 108##NM_023943|TMEM108|66000|transmembrane protein 108##AY358381|TMEM108|66000|transmembrane protein 108##BC000568|TMEM108|66000|transmembrane protein 108##NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin##HQ258421|BFSP2|8419|beaded filament structural protein 2, phakinin##U48224|BFSP2|8419|beaded filament structural protein 2, phakinin	0.146605	
chr4	170578778	170578845	reg1039425.p1	3.615	+	TSC_hg19_v1_chr4_+_170541735 BC070318 AK304362 BC054877 BC026256 BC136510	-36954	+	TSC_hg19_v1_chr4_+_170541724 BX647119	-37103	+	TSC_hg19_v1_chr4_+_170541683 NM_001243372 NM_001829 NM_173872	-37140	+	AK127483 NM_001243374 TSC_hg19_v1_chr4_+_170581295	2444	+	AB528091 AM392880 TSC_hg19_v1_chr4_-_170679066 AK000541 AL136673 BC010367 NM_017867	100261	-	BC066912 AF327560 AK308263 NM_001009554	346111	-	AK304362|CLCN3|1182|chloride channel 3##BC054877|CLCN3|1182|chloride channel 3##BC026256|CLCN3|1182|chloride channel 3##BC136510|CLCN3|1182|chloride channel 3##BX647119|CLCN3|1182|chloride channel 3##NM_001243372|CLCN3|1182|chloride channel 3##NM_001829|CLCN3|1182|chloride channel 3##NM_173872|CLCN3|1182|chloride channel 3##AK127483|CLCN3|1182|chloride channel 3##NM_001243374|CLCN3|1182|chloride channel 3##AM392880|C4orf27|54969|chromosome 4 open reading frame 27##AK000541|C4orf27|54969|chromosome 4 open reading frame 27##AL136673|C4orf27|54969|chromosome 4 open reading frame 27##BC010367|C4orf27|54969|chromosome 4 open reading frame 27##NM_017867|C4orf27|54969|chromosome 4 open reading frame 27##BC066912|MFAP3L|9848|microfibrillar-associated protein 3-like##AF327560|MFAP3L|9848|microfibrillar-associated protein 3-like##AK308263|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001009554|MFAP3L|9848|microfibrillar-associated protein 3-like	0.0	
chr5	57756230	57756410	reg1009002.p1	3.615	+	AB385029 DQ893653 DQ895830 TSC_hg19_v1_chr5_-_57755914 AF223574 BC013879 AK027851 AK297298 AK098163 AK312505 NM_001252226 NM_006622 AF059617	-384	-	BC137470 BC137473 BX648504 NM_001017992	-977726	-	NM_001127236 AL136844 AB463051 AM392551 AM393442	-1246392	+	TSC_hg19_v1_chr5_+_57787262 AK090960 AX746705 NM_152687	30974	+	TSC_hg19_v1_chr5_+_57878923 AY026936 BC013033 NM_138453	122599	+	BC036319 NM_001197223	539438	-	DQ893653|PLK2|10769|polo-like kinase 2##DQ895830|PLK2|10769|polo-like kinase 2##AF223574|PLK2|10769|polo-like kinase 2##BC013879|PLK2|10769|polo-like kinase 2##AK027851|PLK2|10769|polo-like kinase 2##AK297298|PLK2|10769|polo-like kinase 2##AK098163|PLK2|10769|polo-like kinase 2##AK312505|PLK2|10769|polo-like kinase 2##NM_001252226|PLK2|10769|polo-like kinase 2##NM_006622|PLK2|10769|polo-like kinase 2##AF059617|PLK2|10769|polo-like kinase 2##BC137470|ACTBL2|345651|actin, beta-like 2##BC137473|ACTBL2|345651|actin, beta-like 2##BX648504|ACTBL2|345651|actin, beta-like 2##NM_001017992|ACTBL2|345651|actin, beta-like 2##NM_001127236|GPBP1|65056|GC-rich promoter binding protein 1##AL136844|GPBP1|65056|GC-rich promoter binding protein 1##AM392551|GPBP1|65056|GC-rich promoter binding protein 1##AM393442|GPBP1|65056|GC-rich promoter binding protein 1##AK090960|GAPT|202309|GRB2-binding adaptor protein, transmembrane##NM_152687|GAPT|202309|GRB2-binding adaptor protein, transmembrane##AY026936|RAB3C|115827|RAB3C, member RAS oncogene family##BC013033|RAB3C|115827|RAB3C, member RAS oncogene family##NM_138453|RAB3C|115827|RAB3C, member RAS oncogene family##BC036319|PDE4D|5144|phosphodiesterase 4D, cAMP-specific##NM_001197223|PDE4D|5144|phosphodiesterase 4D, cAMP-specific	0.34549	CTCF.p2:-75:0.315
chr5	6574891	6574985	reg1034377.p2	3.615	+	TSC_hg19_v1_chr5_+_6449114 AK057805	-125749	+	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	-126085	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	-196288	-	TSC_hg19_v1_chr5_-_6633158 AK291144 BC137083 AK298980	58216	-	TSC_hg19_v1_chr5_-_6633411 AK055456 AB255451 NM_001193455 NM_017755	58471	-	NM_001047 TSC_hg19_v1_chr5_+_6633508	58572	+	AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##AK291144|NSUN2|54888|NOP2/Sun domain family, member 2##BC137083|NSUN2|54888|NOP2/Sun domain family, member 2##AK298980|NSUN2|54888|NOP2/Sun domain family, member 2##AK055456|NSUN2|54888|NOP2/Sun domain family, member 2##AB255451|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001193455|NSUN2|54888|NOP2/Sun domain family, member 2##NM_017755|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001047|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)	0.0	
chr7	150382670	150382794	reg1035049.p1	3.615	+	NM_001244071 NM_001244072 NM_024711	-52997	-	BC074744 AK294989 BC069461 AK074044 AK308110 BC060760 AK026343 AJ580952 AK314667 AK300445 TSC_hg19_v1_chr7_-_150329475 CR749355	-53352	-	NM_018326 TSC_hg19_v1_chr7_+_150264477 AK301441 BC020657 AK301606 BC020776 AF117333 AK001972	-118256	+	TSC_hg19_v1_chr7_+_150382797 NM_015660 AK074199 BC013934 AL110151 BC032345	68	+	TSC_hg19_v1_chr7_+_150413697 NM_001199577 NM_130759 BC029442 AK091818 AX747200 AK315127 AJ306287 BC040736	30940	+	NM_018384 TSC_hg19_v1_chr7_+_150434485 AK002158 AK297881	51743	+	NM_001244071|GIMAP6|474344|GTPase, IMAP family member 6##NM_001244072|GIMAP6|474344|GTPase, IMAP family member 6##NM_024711|GIMAP6|474344|GTPase, IMAP family member 6##BC074744|GIMAP6|474344|GTPase, IMAP family member 6##AK294989|GIMAP6|474344|GTPase, IMAP family member 6##BC069461|GIMAP6|474344|GTPase, IMAP family member 6##AK074044|GIMAP6|474344|GTPase, IMAP family member 6##AK308110|GIMAP6|474344|GTPase, IMAP family member 6##BC060760|GIMAP6|474344|GTPase, IMAP family member 6##AK026343|GIMAP6|474344|GTPase, IMAP family member 6##AJ580952|GIMAP6|474344|GTPase, IMAP family member 6##AK314667|GIMAP6|474344|GTPase, IMAP family member 6##AK300445|GIMAP6|474344|GTPase, IMAP family member 6##CR749355|GIMAP6|474344|GTPase, IMAP family member 6##NM_018326|GIMAP4|55303|GTPase, IMAP family member 4##AK301441|GIMAP4|55303|GTPase, IMAP family member 4##BC020657|GIMAP4|55303|GTPase, IMAP family member 4##AK301606|GIMAP4|55303|GTPase, IMAP family member 4##BC020776|GIMAP4|55303|GTPase, IMAP family member 4##AF117333|GIMAP4|55303|GTPase, IMAP family member 4##AK001972|GIMAP4|55303|GTPase, IMAP family member 4##NM_015660|GIMAP2|26157|GTPase, IMAP family member 2##AK074199|GIMAP2|26157|GTPase, IMAP family member 2##BC013934|GIMAP2|26157|GTPase, IMAP family member 2##AL110151|GIMAP2|26157|GTPase, IMAP family member 2##BC032345|GIMAP2|26157|GTPase, IMAP family member 2##NM_001199577|GIMAP1-GIMAP5|100527949|GIMAP1-GIMAP5 readthrough##NM_130759|GIMAP1|170575|GTPase, IMAP family member 1##AK091818|GIMAP1|170575|GTPase, IMAP family member 1##AK315127|GIMAP1|170575|GTPase, IMAP family member 1##AJ306287|GIMAP1|170575|GTPase, IMAP family member 1##BC040736|GIMAP1|170575|GTPase, IMAP family member 1##NM_018384|GIMAP5|55340|GTPase, IMAP family member 5##AK002158|GIMAP5|55340|GTPase, IMAP family member 5##AK297881|GIMAP5|55340|GTPase, IMAP family member 5	0.0	
chr7	90226271	90226337	reg1036908.p1	3.615	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	-495	+	TSC_hg19_v1_chr7_+_90032774 AL136770 BC016061	-193500	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	-193600	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	112479	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	112856	+	BC017719 TSC_hg19_v1_chr7_+_90893724	667397	+	AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##AL136770|CLDN12|9069|claudin 12##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14##BC017719|FZD1|8321|frizzled family receptor 1	0.0	
chr11	47292595	47292719	reg1038064.p1	3.614	+	TSC_hg19_v1_chr11_+_47291683 NM_001135943 NM_130475 NM_130476 BC040484 AB002356 U44953	-939	+	TSC_hg19_v1_chr11_+_47291234 NM_001135944 NM_003682 NM_130471 NM_130472 NM_130473 NM_130474 AF440100 AF440101 AF440102 AF440103 AF440434 AK292442	-1444	+	TSC_hg19_v1_chr11_+_47290926 NM_130470 U77352	-1717	+	BC136543 BC136546 X84075 BC142685 BC151211 AK291569 AK297843 EF560722 EU747718 EU747719 NM_000256 TSC_hg19_v1_chr11_-_47374254	81580	-	AB464244 TSC_hg19_v1_chr11_-_47399956	107285	-	TSC_hg19_v1_chr11_-_47400039 AK310065	107358	-	NM_001135943|MADD|8567|MAP-kinase activating death domain##NM_130475|MADD|8567|MAP-kinase activating death domain##NM_130476|MADD|8567|MAP-kinase activating death domain##BC040484|MADD|8567|MAP-kinase activating death domain##AB002356|MADD|8567|MAP-kinase activating death domain##U44953|MADD|8567|MAP-kinase activating death domain##NM_001135944|MADD|8567|MAP-kinase activating death domain##NM_003682|MADD|8567|MAP-kinase activating death domain##NM_130471|MADD|8567|MAP-kinase activating death domain##NM_130472|MADD|8567|MAP-kinase activating death domain##NM_130473|MADD|8567|MAP-kinase activating death domain##NM_130474|MADD|8567|MAP-kinase activating death domain##AF440100|MADD|8567|MAP-kinase activating death domain##AF440101|MADD|8567|MAP-kinase activating death domain##AF440102|MADD|8567|MAP-kinase activating death domain##AF440103|MADD|8567|MAP-kinase activating death domain##AF440434|MADD|8567|MAP-kinase activating death domain##AK292442|MADD|8567|MAP-kinase activating death domain##NM_130470|MADD|8567|MAP-kinase activating death domain##U77352|MADD|8567|MAP-kinase activating death domain##BC136543|MYBPC3|4607|myosin binding protein C, cardiac##BC136546|MYBPC3|4607|myosin binding protein C, cardiac##X84075|MYBPC3|4607|myosin binding protein C, cardiac##BC142685|MYBPC3|4607|myosin binding protein C, cardiac##BC151211|MYBPC3|4607|myosin binding protein C, cardiac##AK291569|MYBPC3|4607|myosin binding protein C, cardiac##AK297843|MYBPC3|4607|myosin binding protein C, cardiac##EF560722|MYBPC3|4607|myosin binding protein C, cardiac##EU747718|MYBPC3|4607|myosin binding protein C, cardiac##EU747719|MYBPC3|4607|myosin binding protein C, cardiac##NM_000256|MYBPC3|4607|myosin binding protein C, cardiac##AK310065|SPI1|6688|spleen focus forming virus (SFFV) proviral integration oncogene spi1	0.115744	
chr12	114451872	114452000	reg1035572.p1	3.614	+	CU678656 EU831458 EU831545 AB385372 AB014582 BC004289 BC006137 AL117547 TSC_hg19_v1_chr12_-_114404131 AK291444 AK314606 NM_001146698 NM_001146699 NM_016196	-47832	-	AF291181 NM_022363	-542060	-	TSC_hg19_v1_chr12_+_113860217 BC009849 NM_138432 BC091479 AF134473	-591739	+	NM_080718 U80987 U89353 AB527531 EU446658	389768	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	391988	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	394282	-	EU831458|RBM19|9904|RNA binding motif protein 19##EU831545|RBM19|9904|RNA binding motif protein 19##AB014582|RBM19|9904|RNA binding motif protein 19##BC004289|RBM19|9904|RNA binding motif protein 19##BC006137|RBM19|9904|RNA binding motif protein 19##AL117547|RBM19|9904|RNA binding motif protein 19##AK291444|RBM19|9904|RNA binding motif protein 19##AK314606|RBM19|9904|RNA binding motif protein 19##NM_001146698|RBM19|9904|RNA binding motif protein 19##NM_001146699|RBM19|9904|RNA binding motif protein 19##NM_016196|RBM19|9904|RNA binding motif protein 19##AF291181|LHX5|64211|LIM homeobox 5##NM_022363|LHX5|64211|LIM homeobox 5##BC009849|SDSL|113675|serine dehydratase-like##NM_138432|SDSL|113675|serine dehydratase-like##BC091479|SDSL|113675|serine dehydratase-like##AF134473|SDSL|113675|serine dehydratase-like##NM_080718|TBX5|6910|T-box 5##U80987|TBX5|6910|T-box 5##U89353|TBX5|6910|T-box 5##EU446658|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5	0.01066	
chr12	95043692	95043853	reg1030191.p1	3.614	+	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-190040	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-190130	-	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	-190241	-	EU831778 EU831856 BC040535 NM_020698	492	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	353698	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	353744	-	BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	0.056333	
chr15	80445481	80445593	reg1035348.p1	3.614	+	M55150 TSC_hg19_v1_chr15_+_80445353 BC002527 CU678020 BT007160	-161	+	TSC_hg19_v1_chr15_+_80445268 D28440 NM_000137 AK313951	-285	+	TSC_hg19_v1_chr15_+_80445130 AK297965	-405	+	TSC_hg19_v1_chr15_+_80696739 BC051335 NM_014862 BC036099 BX647212 BX538026 AM392973 DQ890610 DQ894176	251197	+	AK295763 TSC_hg19_v1_chr15_+_80733623	288068	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	542125	+	M55150|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC002527|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BT007160|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##D28440|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##NM_000137|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK313951|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##AK297965|FAH|2184|fumarylacetoacetate hydrolase (fumarylacetoacetase)##BC051335|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##NM_014862|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC036099|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX647212|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BX538026|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AM392973|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ890610|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##DQ894176|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##AK295763|ARNT2|9915|aryl-hydrocarbon receptor nuclear translocator 2##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1	0.0	
chr18	21166409	21166590	reg1014714.p1	3.614	+	TSC_hg19_v1_chr18_-_21166428 BC063302 AF002020	-91	-	TSC_hg19_v1_chr18_+_21083474 NM_013326 AK057192 AK295246 AK296230 AK294169 BC008305 BC002950	-83025	+	TSC_hg19_v1_chr18_+_21033285 AF013591	-133195	+	TSC_hg19_v1_chr18_-_21166458 AK295715 NM_000271	11	-	TSC_hg19_v1_chr18_-_21242592 CU688952 AK313667 AK057782 BC030622 NM_173505	76221	-	TSC_hg19_v1_chr18_+_21269416 AK096422	102915	+	BC063302|NPC1|4864|Niemann-Pick disease, type C1##AF002020|NPC1|4864|Niemann-Pick disease, type C1##NM_013326|C18orf8|29919|chromosome 18 open reading frame 8##AK057192|C18orf8|29919|chromosome 18 open reading frame 8##AK295246|C18orf8|29919|chromosome 18 open reading frame 8##AK296230|C18orf8|29919|chromosome 18 open reading frame 8##AK294169|C18orf8|29919|chromosome 18 open reading frame 8##BC008305|C18orf8|29919|chromosome 18 open reading frame 8##BC002950|C18orf8|29919|chromosome 18 open reading frame 8##AF013591|RIOK3|8780|RIO kinase 3 (yeast)##AK295715|NPC1|4864|Niemann-Pick disease, type C1##NM_000271|NPC1|4864|Niemann-Pick disease, type C1##AK313667|ANKRD29|147463|ankyrin repeat domain 29##AK057782|ANKRD29|147463|ankyrin repeat domain 29##BC030622|ANKRD29|147463|ankyrin repeat domain 29##NM_173505|ANKRD29|147463|ankyrin repeat domain 29##AK096422|LAMA3|3909|laminin, alpha 3	0.0	
chr18	69065949	69066053	reg1037749.p1	3.614	+	TSC_hg19_v1_chr18_+_67956280 BC020082	-1109740	+	NM_004232 TSC_hg19_v1_chr18_+_67956194	-1109834	+	TSC_hg19_v1_chr18_-_67872911 BC143723 AK096404 NM_173630	-1193063	-	BC110843 BC035789 TSC_hg19_v1_chr18_-_70210781 AK291364	1144774	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	1145729	-	AF448839 NM_138999	1466932	-	BC020082|SOCS6|9306|suppressor of cytokine signaling 6##NM_004232|SOCS6|9306|suppressor of cytokine signaling 6##BC143723|RTTN|25914|rotatin##AK096404|RTTN|25914|rotatin##NM_173630|RTTN|25914|rotatin##BC110843|CBLN2|147381|cerebellin 2 precursor##BC035789|CBLN2|147381|cerebellin 2 precursor##AK291364|CBLN2|147381|cerebellin 2 precursor##NM_182511|CBLN2|147381|cerebellin 2 precursor##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1	0.0	
chr19	17518698	17518790	reg1034348.p1	3.614	+	AK311380 AK055623 TSC_hg19_v1_chr19_+_17516630	-2178	+	CU689786 D28137 NM_004335 AK223124 AK291099 AK303593 TSC_hg19_v1_chr19_-_17516428 BC033873	-2325	-	CU691156 TSC_hg19_v1_chr19_-_17488155 AF348827 BC050365 BC056414 NM_031310 AF326591 AL834363 AK096030 AK313837	-30612	-	TSC_hg19_v1_chr19_+_17530855 AK057057 AK289487	12104	+	TSC_hg19_v1_chr19_+_17530872 BC011840 NM_138401 BC007883	12155	+	NM_001190844	40631	-	AK311380|LOC100507535|100507535|uncharacterized LOC100507535##AK055623|LOC100507535|100507535|uncharacterized LOC100507535##D28137|BST2|684|bone marrow stromal cell antigen 2##NM_004335|BST2|684|bone marrow stromal cell antigen 2##AK223124|BST2|684|bone marrow stromal cell antigen 2##AK291099|BST2|684|bone marrow stromal cell antigen 2##AK303593|BST2|684|bone marrow stromal cell antigen 2##BC033873|BST2|684|bone marrow stromal cell antigen 2##AF348827|PLVAP|83483|plasmalemma vesicle associated protein##BC050365|PLVAP|83483|plasmalemma vesicle associated protein##BC056414|PLVAP|83483|plasmalemma vesicle associated protein##NM_031310|PLVAP|83483|plasmalemma vesicle associated protein##AF326591|PLVAP|83483|plasmalemma vesicle associated protein##AL834363|PLVAP|83483|plasmalemma vesicle associated protein##AK096030|PLVAP|83483|plasmalemma vesicle associated protein##AK313837|PLVAP|83483|plasmalemma vesicle associated protein##AK057057|FAM125A|93343|family with sequence similarity 125, member A##AK289487|FAM125A|93343|family with sequence similarity 125, member A##BC011840|FAM125A|93343|family with sequence similarity 125, member A##NM_138401|FAM125A|93343|family with sequence similarity 125, member A##BC007883|FAM125A|93343|family with sequence similarity 125, member A##NM_001190844|TMEM221|100130519|transmembrane protein 221	0.0	
chr1	9188809	9188933	reg1038891.p2	3.614	+	TSC_hg19_v1_chr1_-_9129695 M55531 AK290398 AK294368 NM_001135585 NM_003039	-59095	-	TSC_hg19_v1_chr1_-_9129644 AK289849 BC001692 BC001820 AK295785 BC035878	-59230	-	TSC_hg19_v1_chr1_-_9129605 DQ892291 DQ895491 CU674838 AK300091	-59272	-	DQ892804 DQ896051 TSC_hg19_v1_chr1_-_9189169 AK022194 AK292888 AK304154 AY768808 NM_024980 BC094733 BC018691	350	-	TSC_hg19_v1_chr1_+_9294832 BC081559	105944	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	106046	+	M55531|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK290398|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK294368|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_001135585|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_003039|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK289849|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001692|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001820|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK295785|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC035878|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892291|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ895491|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK300091|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892804|GPR157|80045|G protein-coupled receptor 157##DQ896051|GPR157|80045|G protein-coupled receptor 157##AK022194|GPR157|80045|G protein-coupled receptor 157##AK292888|GPR157|80045|G protein-coupled receptor 157##AK304154|GPR157|80045|G protein-coupled receptor 157##AY768808|GPR157|80045|G protein-coupled receptor 157##NM_024980|GPR157|80045|G protein-coupled receptor 157##BC018691|GPR157|80045|G protein-coupled receptor 157##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	0.0642	
chr19	39050562	39050665	reg1030218.p2	3.614	+	TSC_hg19_v1_chr19_+_38924330 NM_000540 NM_001042723 J05200	-126269	+	AF448437 BC146669 BC150202 BC142721 BC151216 TSC_hg19_v1_chr19_-_38916860 AX721071 AY048119 AY048120 AY048121 FJ768677 FJ768678 FJ768679 FJ768680 FJ768681 FJ768682 NM_001146202 NM_001146203 NM_001146204 NM_001146205 NM_001146206 NM_001146207 NM_170604	-133741	-	TSC_hg19_v1_chr19_+_38893839 BC080606 AK128745	-156712	+	AB527182 TSC_hg19_v1_chr19_-_39108593 NM_001042600 NM_007181	57975	-	TSC_hg19_v1_chr19_+_39109725 NM_013234 AF077051 AF085358 AB019392 AY245432	59100	+	TSC_hg19_v1_chr19_+_39109825 BC007559 AK298635	59203	+	NM_000540|RYR1|6261|ryanodine receptor 1 (skeletal)##NM_001042723|RYR1|6261|ryanodine receptor 1 (skeletal)##J05200|RYR1|6261|ryanodine receptor 1 (skeletal)##AF448437|RASGRP4|115727|RAS guanyl releasing protein 4##BC146669|RASGRP4|115727|RAS guanyl releasing protein 4##BC150202|RASGRP4|115727|RAS guanyl releasing protein 4##BC142721|RASGRP4|115727|RAS guanyl releasing protein 4##BC151216|RASGRP4|115727|RAS guanyl releasing protein 4##AY048119|RASGRP4|115727|RAS guanyl releasing protein 4##AY048120|RASGRP4|115727|RAS guanyl releasing protein 4##AY048121|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768677|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768678|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768679|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768680|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768681|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768682|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146202|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146203|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146204|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146205|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146206|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146207|RASGRP4|115727|RAS guanyl releasing protein 4##NM_170604|RASGRP4|115727|RAS guanyl releasing protein 4##BC080606|FAM98C|147965|family with sequence similarity 98, member C##AK128745|FAM98C|147965|family with sequence similarity 98, member C##NM_001042600|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_007181|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_013234|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF077051|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF085358|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AB019392|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AY245432|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##BC007559|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK298635|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K	0.0	
chr21	44819896	44819963	reg1043419.p2	3.614	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-230755	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-292245	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-292304	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	26060	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	27066	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	259433	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr3	72540033	72540120	reg1028659.p2	3.614	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-705805	-	AK313656 NM_173359	-736153	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-736554	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	357472	-	BC017274 TSC_hg19_v1_chr3_-_72897575	357499	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	357516	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr3	77397512	77397622	reg1040899.p1	3.614	+	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-308287	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-1562865	-	NM_001128223	-1563313	-	TSC_hg19_v1_chr3_-_78666943 AK025535	1269418	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	1671020	-	NM_002941	2419491	-	DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK123776|ZNF717|100131827|zinc finger protein 717##NM_001128223|ZNF717|100131827|zinc finger protein 717##AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)	0.931797	CTCF.p2:-5:0.932
chr4	89378283	89378464	reg1021766.p2	3.614	+	TSC_hg19_v1_chr4_+_89378269 AY337518 NM_016323 AB027289 BC140716	-51	+	TSC_hg19_v1_chr4_+_89300147 AK092403 AX747525 BX647121	-78207	+	AK295832 TSC_hg19_v1_chr4_+_89300006 BC042047	-78376	+	TSC_hg19_v1_chr4_-_89444916 AB206972 BC007876 AK312082	66548	-	TSC_hg19_v1_chr4_-_89444931 NM_001042616 NM_032906	66579	-	AK296379 TSC_hg19_v1_chr4_+_89513611 AK289990 BC038960 D25215 NM_014606	135248	+	AY337518|HERC5|51191|hect domain and RLD 5##NM_016323|HERC5|51191|hect domain and RLD 5##AB027289|HERC5|51191|hect domain and RLD 5##BC140716|HERC5|51191|hect domain and RLD 5##AK092403|HERC6|55008|hect domain and RLD 6##BX647121|HERC6|55008|hect domain and RLD 6##AK295832|HERC6|55008|hect domain and RLD 6##BC042047|HERC6|55008|hect domain and RLD 6##AB206972|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##BC007876|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AK312082|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_001042616|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##NM_032906|PIGY|84992|phosphatidylinositol glycan anchor biosynthesis, class Y##AK296379|HERC3|8916|hect domain and RLD 3##AK289990|HERC3|8916|hect domain and RLD 3##BC038960|HERC3|8916|hect domain and RLD 3##D25215|HERC3|8916|hect domain and RLD 3##NM_014606|HERC3|8916|hect domain and RLD 3	0.0	
chr7	111202032	111202185	reg1034522.p1	3.614	+	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	-470985	+	NM_001024607	-2677472	-	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-2991734	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	376	-	TSC_hg19_v1_chr7_-_111428948 AK294820	226903	-	AY233380 BC117688 BC117689 BC117694 TSC_hg19_v1_chr7_-_111846334	644157	-	NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK294820|DOCK4|9732|dedicator of cytokinesis 4##AY233380|DOCK4|9732|dedicator of cytokinesis 4##BC117688|DOCK4|9732|dedicator of cytokinesis 4##BC117689|DOCK4|9732|dedicator of cytokinesis 4##BC117694|DOCK4|9732|dedicator of cytokinesis 4	0.0	
chr7	2790814	2790978	reg1041863.p2	3.614	+	AK289723 AB075830 BC146753 NM_133463	-71738	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-119193	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	-119293	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	92912	-	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	292566	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	550103	+	AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1	0.480862	CTCF.p2:21:0.481
chr8	58652047	58652134	reg1037706.p1	3.614	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-745664	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-745688	-	TSC_hg19_v1_chr8_-_57906381 BC017797	-745712	-	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	255067	+	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	671795	+	X56088 M93133 BC101777 BC112184 NM_000780	760617	-	AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC017797|IMPAD1|54928|inositol monophosphatase domain containing 1##AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1	0.840202	CTCF.p2:-2:0.840
chr10	120354006	120354117	reg1037330.p1	3.613	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	-252237	-	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	-547631	+	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	-548017	-	AK313269 AK290461 NM_004248	1097	-	CU691560 TSC_hg19_v1_chr10_-_120514298	160226	-	TSC_hg19_v1_chr10_-_120514483 AJ544771 AK097728	160450	-	AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A##BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AK313269|PRLHR|2834|prolactin releasing hormone receptor##AK290461|PRLHR|2834|prolactin releasing hormone receptor##NM_004248|PRLHR|2834|prolactin releasing hormone receptor##AJ544771|C10orf46|143384|chromosome 10 open reading frame 46##AK097728|C10orf46|143384|chromosome 10 open reading frame 46	0.987017	CTCF.p2:-16:0.987
chr1	110526919	110527088	reg1001119.p1	3.613	+	BC021117 TSC_hg19_v1_chr1_+_110453470 AK291660 M37435 M27087 U22386 AB527768 M64592	-73453	+	NM_000757 NM_172210 NM_172212	-73771	+	AY074930 TSC_hg19_v1_chr1_-_110306546 AK307932 AK310979 AK308196 AK025175 AK225235 BC012926 AK292198 AK290261 NM_024526 NM_133181 NM_139053	-220419	-	AF315687 TSC_hg19_v1_chr1_+_110527316	308	+	TSC_hg19_v1_chr1_+_110527386 BC111563 NM_001242673 NM_006621 BC065254	358	+	BC010681 TSC_hg19_v1_chr1_+_110527405	399	+	BC021117|CSF1|1435|colony stimulating factor 1 (macrophage)##AK291660|CSF1|1435|colony stimulating factor 1 (macrophage)##M37435|CSF1|1435|colony stimulating factor 1 (macrophage)##M27087|CSF1|1435|colony stimulating factor 1 (macrophage)##U22386|CSF1|1435|colony stimulating factor 1 (macrophage)##M64592|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_000757|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172210|CSF1|1435|colony stimulating factor 1 (macrophage)##NM_172212|CSF1|1435|colony stimulating factor 1 (macrophage)##AY074930|EPS8L3|79574|EPS8-like 3##AK307932|EPS8L3|79574|EPS8-like 3##AK310979|EPS8L3|79574|EPS8-like 3##AK308196|EPS8L3|79574|EPS8-like 3##AK025175|EPS8L3|79574|EPS8-like 3##AK225235|EPS8L3|79574|EPS8-like 3##BC012926|EPS8L3|79574|EPS8-like 3##AK292198|EPS8L3|79574|EPS8-like 3##AK290261|EPS8L3|79574|EPS8-like 3##NM_024526|EPS8L3|79574|EPS8-like 3##NM_133181|EPS8L3|79574|EPS8-like 3##NM_139053|EPS8L3|79574|EPS8-like 3##AF315687|AHCYL1|10768|adenosylhomocysteinase-like 1##BC111563|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_001242673|AHCYL1|10768|adenosylhomocysteinase-like 1##NM_006621|AHCYL1|10768|adenosylhomocysteinase-like 1##BC065254|AHCYL1|10768|adenosylhomocysteinase-like 1##BC010681|AHCYL1|10768|adenosylhomocysteinase-like 1	0.0	
chr11	31839023	31839089	reg1041900.p1	3.613	+	AB209177 TSC_hg19_v1_chr11_-_31832871 BX640762 NM_000280 NM_001604	-6187	-	BC011953 TSC_hg19_v1_chr11_-_31832790	-6269	-	TSC_hg19_v1_chr11_-_31832761 M93650	-6294	-	AB593092 AK314470 NM_001127612 TSC_hg19_v1_chr11_-_31839510	422	-	TSC_hg19_v1_chr11_+_32112495 AK129791 NM_002901	273421	+	BC010120 TSC_hg19_v1_chr11_+_32112676 D42073 CU679627 DQ892928 DQ896177	273643	+	AB209177|PAX6|5080|paired box 6##BX640762|PAX6|5080|paired box 6##NM_000280|PAX6|5080|paired box 6##NM_001604|PAX6|5080|paired box 6##BC011953|PAX6|5080|paired box 6##M93650|PAX6|5080|paired box 6##AB593092|PAX6|5080|paired box 6##AK314470|PAX6|5080|paired box 6##NM_001127612|PAX6|5080|paired box 6##AK129791|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##NM_002901|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##BC010120|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##D42073|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ892928|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain##DQ896177|RCN1|5954|reticulocalbin 1, EF-hand calcium binding domain	0.0	
chr12	122028213	122028280	reg1022101.p1	3.613	+	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	-9332	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	-9987	-	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	-123172	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	36397	+	BC057760 NM_173855	79313	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	122498	+	BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B	0.0	
chr12	131486851	131486996	reg1032804.p1	3.613	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-48470	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-130212	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-130298	+	TSC_hg19_v1_chr12_+_132195623 BC142980	708690	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	708733	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	826043	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.0	
chr16	18229004	18229114	reg1037174.p1	3.613	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	-664254	-	TSC_hg19_v1_chr16_+_16326508 AB463143	-1902529	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1902571	+	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	344332	-	TSC_hg19_v1_chr16_-_18798077 AK127316	569037	-	BC001697 TSC_hg19_v1_chr16_-_18801657 BC030569 BC032115 AK023088 AK130967 AK291988 AK311976 D28347 NM_001019 NM_001030009 BC105273 BC105292	572596	-	AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2##BC001697|RPS15A|6210|ribosomal protein S15a##BC030569|RPS15A|6210|ribosomal protein S15a##BC032115|RPS15A|6210|ribosomal protein S15a##AK023088|RPS15A|6210|ribosomal protein S15a##AK130967|RPS15A|6210|ribosomal protein S15a##AK291988|RPS15A|6210|ribosomal protein S15a##AK311976|RPS15A|6210|ribosomal protein S15a##NM_001019|RPS15A|6210|ribosomal protein S15a##NM_001030009|RPS15A|6210|ribosomal protein S15a##BC105273|RPS15A|6210|ribosomal protein S15a##BC105292|RPS15A|6210|ribosomal protein S15a	0.997195	CTCF.p2:16:0.997
chr20	35944916	35945091	reg1040914.p3	3.613	+	TSC_hg19_v1_chr20_+_35918065 BC016822 BC014672	-26918	+	TSC_hg19_v1_chr20_+_35918057 AK292971 NM_001003897 NM_022077	-26968	+	X00094 BC098109 BC098161 BC099727 NM_001184731 NM_021081	-59716	-	TSC_hg19_v1_chr20_+_35973086 AF272982 NM_005417	28090	+	TSC_hg19_v1_chr20_+_35974513 NM_198291 Z18364	29504	+	TSC_hg19_v1_chr20_+_36011960 BC011566	67000	+	BC016822|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC014672|MANBAL|63905|mannosidase, beta A, lysosomal-like##AK292971|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_001003897|MANBAL|63905|mannosidase, beta A, lysosomal-like##NM_022077|MANBAL|63905|mannosidase, beta A, lysosomal-like##X00094|GHRH|2691|growth hormone releasing hormone##BC098109|GHRH|2691|growth hormone releasing hormone##BC098161|GHRH|2691|growth hormone releasing hormone##BC099727|GHRH|2691|growth hormone releasing hormone##NM_001184731|GHRH|2691|growth hormone releasing hormone##NM_021081|GHRH|2691|growth hormone releasing hormone##AF272982|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005417|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##BC011566|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)	0.0	
chr20	49156379	49156530	reg1039678.p2	3.613	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	-29449	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-29522	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-29535	+	AK056792 NM_080829	96971	-	TSC_hg19_v1_chr20_-_49308074 AK124347	151623	-	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	191615	+	BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	0.0	
chr6	79959870	79960008	reg1017521.p1	3.613	+	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	-15514	-	L40357 TSC_hg19_v1_chr6_-_79944391 AF401520 AF274949 BC009529	-15581	-	TSC_hg19_v1_chr6_-_79787972 AK057039 NM_017934	-171882	-	TSC_hg19_v1_chr6_-_80247114 AK299314 BX648161 BC050327 NM_001122769 NM_181714	287190	-	TSC_hg19_v1_chr6_+_80341019 AF340151 NM_031469 BC109043 BC109044 AK311757 BC040489 AK074506 BC052987 BC060799 BC070059 AJ297972	381135	+	NM_001243308	620197	-	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3##L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3##BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3##AK057039|PHIP|55023|pleckstrin homology domain interacting protein##NM_017934|PHIP|55023|pleckstrin homology domain interacting protein##AK299314|LCA5|167691|Leber congenital amaurosis 5##BX648161|LCA5|167691|Leber congenital amaurosis 5##BC050327|LCA5|167691|Leber congenital amaurosis 5##NM_001122769|LCA5|167691|Leber congenital amaurosis 5##NM_181714|LCA5|167691|Leber congenital amaurosis 5##AF340151|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_031469|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109043|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109044|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK311757|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC040489|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK074506|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC052987|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC060799|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC070059|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AJ297972|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7	0.0	
chr10	82864287	82864467	reg1032347.p1	3.612	+	AK123978 NM_001145719	-563803	+	AK123885 NM_207372	-566720	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-650273	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	770705	+	DQ857894 NM_001165973	773065	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3034880	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.0	
chr11	99610469	99610544	reg1016051.p2	3.612	+	AB013802 AB013803 NM_175566	-183633	+	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	-718757	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-3487332	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	947622	+	AK314174 AF247167 NM_032021	1252258	+	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	1389293	-	AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42##AK314174|TMEM133|83935|transmembrane protein 133##AF247167|TMEM133|83935|transmembrane protein 133##NM_032021|TMEM133|83935|transmembrane protein 133##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor	0.872316	
chr15	75423376	75423504	reg1032891.p1	3.612	+	TSC_hg19_v1_chr15_+_75315949 AK027491 AY358848	-107459	+	NM_021823 TSC_hg19_v1_chr15_+_75315930	-107512	+	TSC_hg19_v1_chr15_+_75287924 AK126940 NM_001178111 NM_001178112 NM_138967 AK056438 AL834226 AK301505 AF495715 AK127480 CR936761	-135533	+	AK128205 TSC_hg19_v1_chr15_+_75491259	67806	+	TSC_hg19_v1_chr15_+_75494220 NM_015492 AK125111	70772	+	BC110367 TSC_hg19_v1_chr15_+_75494233	70793	+	AK027491|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AY358848|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##NM_021823|PPCDC|60490|phosphopantothenoylcysteine decarboxylase##AK126940|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178111|SCAMP5|192683|secretory carrier membrane protein 5##NM_001178112|SCAMP5|192683|secretory carrier membrane protein 5##NM_138967|SCAMP5|192683|secretory carrier membrane protein 5##AK056438|SCAMP5|192683|secretory carrier membrane protein 5##AL834226|SCAMP5|192683|secretory carrier membrane protein 5##AK301505|SCAMP5|192683|secretory carrier membrane protein 5##AF495715|SCAMP5|192683|secretory carrier membrane protein 5##AK127480|SCAMP5|192683|secretory carrier membrane protein 5##CR936761|SCAMP5|192683|secretory carrier membrane protein 5##AK128205|C15orf39|56905|chromosome 15 open reading frame 39##NM_015492|C15orf39|56905|chromosome 15 open reading frame 39##AK125111|C15orf39|56905|chromosome 15 open reading frame 39##BC110367|C15orf39|56905|chromosome 15 open reading frame 39	0.0	
chr16	146868	146967	reg1000861.p1	3.612	+	TSC_hg19_v1_chr16_+_128241 AK308654 AY258284 L10752 AB463933 CU677157 DQ895912	-18647	+	TSC_hg19_v1_chr16_+_128229 BC014991	-18690	+	NM_001015052 NM_002434 TSC_hg19_v1_chr16_+_128206	-18730	+	AK298795 BC004185 BC012825 AK300736 BC020392 TSC_hg19_v1_chr16_-_188638	41537	-	TSC_hg19_v1_chr16_-_188673 AK090717 AK294228 NM_001039476 NM_001077350 NM_001243247 NM_001243248 NM_001243249	41762	-	NM_005332 BC027892 M24173 AB590422 DQ894080 EU176221 CR456848	55963	+	AK308654|MPG|4350|N-methylpurine-DNA glycosylase##AY258284|MPG|4350|N-methylpurine-DNA glycosylase##L10752|MPG|4350|N-methylpurine-DNA glycosylase##DQ895912|MPG|4350|N-methylpurine-DNA glycosylase##BC014991|MPG|4350|N-methylpurine-DNA glycosylase##NM_001015052|MPG|4350|N-methylpurine-DNA glycosylase##NM_002434|MPG|4350|N-methylpurine-DNA glycosylase##AK298795|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##BC004185|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##BC012825|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##AK300736|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##BC020392|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##AK090717|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##AK294228|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001039476|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001077350|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001243247|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001243248|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_001243249|NPRL3|8131|nitrogen permease regulator-like 3 (S. cerevisiae)##NM_005332|HBZ|3050|hemoglobin, zeta##BC027892|HBZ|3050|hemoglobin, zeta##M24173|HBZ|3050|hemoglobin, zeta##DQ894080|HBZ|3050|hemoglobin, zeta##EU176221|HBZ|3050|hemoglobin, zeta##CR456848|HBZ|3050|hemoglobin, zeta	0.0	
chr16	3355629	3355706	reg1046337.p2	3.612	+	NM_153028 BC150306 AK056091 TSC_hg19_v1_chr16_+_3355496 CR749782	-193	+	TSC_hg19_v1_chr16_-_3355422 AK309406 NM_033208	-240	-	TSC_hg19_v1_chr16_+_3333522 D88827	-22143	+	BC126269 BC130328 NM_012368 BC069158 BC069456 CU686822 HQ258169	50247	+	NM_001190476	66615	-	BC002859 TSC_hg19_v1_chr16_-_3450980 AK301586 AK056463 AK291213 AK299070 AK303338 AY261676 NM_017810	95326	-	NM_153028|ZNF75A|7627|zinc finger protein 75a##BC150306|ZNF75A|7627|zinc finger protein 75a##AK056091|ZNF75A|7627|zinc finger protein 75a##CR749782|ZNF75A|7627|zinc finger protein 75a##NM_033208|TIGD7|91151|tigger transposable element derived 7##D88827|ZNF263|10127|zinc finger protein 263##BC126269|OR2C1|4993|olfactory receptor, family 2, subfamily C, member 1##BC130328|OR2C1|4993|olfactory receptor, family 2, subfamily C, member 1##NM_012368|OR2C1|4993|olfactory receptor, family 2, subfamily C, member 1##BC069158|OR2C1|4993|olfactory receptor, family 2, subfamily C, member 1##BC069456|OR2C1|4993|olfactory receptor, family 2, subfamily C, member 1##HQ258169|OR2C1|4993|olfactory receptor, family 2, subfamily C, member 1##NM_001190476|MTRNR2L4|100463285|MT-RNR2-like 4##BC002859|ZNF434|54925|zinc finger protein 434##AK301586|ZNF434|54925|zinc finger protein 434##AK056463|ZNF434|54925|zinc finger protein 434##AK291213|ZNF434|54925|zinc finger protein 434##AK299070|ZNF434|54925|zinc finger protein 434##AY261676|ZNF434|54925|zinc finger protein 434##NM_017810|ZNF434|54925|zinc finger protein 434	0.030896	
chr16	57014882	57014993	reg1032784.p1	3.612	+	M30185 AK297699 NM_000078 TSC_hg19_v1_chr16_+_56995861 AK291586 BC025739 EU176529 CU693046 BT020064 M83573	-19100	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	-48796	+	NM_001010989 NM_001010990 NM_014685	-49190	+	TSC_hg19_v1_chr16_+_57023474 AK097030	8523	+	AK074182 NM_032206	36048	+	AF389420 EF452236 TSC_hg19_v1_chr16_+_57054697	39723	+	M30185|CETP|1071|cholesteryl ester transfer protein, plasma##AK297699|CETP|1071|cholesteryl ester transfer protein, plasma##NM_000078|CETP|1071|cholesteryl ester transfer protein, plasma##AK291586|CETP|1071|cholesteryl ester transfer protein, plasma##BC025739|CETP|1071|cholesteryl ester transfer protein, plasma##EU176529|CETP|1071|cholesteryl ester transfer protein, plasma##BT020064|CETP|1071|cholesteryl ester transfer protein, plasma##M83573|CETP|1071|cholesteryl ester transfer protein, plasma##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK097030|NLRC5|84166|NLR family, CARD domain containing 5##AK074182|NLRC5|84166|NLR family, CARD domain containing 5##NM_032206|NLRC5|84166|NLR family, CARD domain containing 5##AF389420|NLRC5|84166|NLR family, CARD domain containing 5##EF452236|NLRC5|84166|NLR family, CARD domain containing 5	0.0	
chr17	46340502	46340610	reg1041865.p1	3.612	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-155404	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-155571	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-161735	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	166982	-	TSC_hg19_v1_chr17_-_46507604 BC039040	167061	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	267715	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.994763	CTCF.p2:1:0.995
chr18	22815781	22815883	reg1033279.p1	3.612	+	AF312230 BC069136 NM_001143828 NM_001160166 NM_021624 AB045370 BC112348 AB044934 AF307973 AF325356 AF329449 AJ298292 AY008280 AY136745 DQ835186 DQ835187	-775190	+	TSC_hg19_v1_chr18_+_22006671 AK312727 BC034016 AB026264 AB587563 CU689806 DQ893141 EU176771 AF208694	-809167	+	TSC_hg19_v1_chr18_+_22006608 AK292533 NM_018439 BC036074	-809225	+	TSC_hg19_v1_chr18_-_22931121 AB385259	115316	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	116205	-	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	116331	-	AF312230|HRH4|59340|histamine receptor H4##BC069136|HRH4|59340|histamine receptor H4##NM_001143828|HRH4|59340|histamine receptor H4##NM_001160166|HRH4|59340|histamine receptor H4##NM_021624|HRH4|59340|histamine receptor H4##AB045370|HRH4|59340|histamine receptor H4##BC112348|HRH4|59340|histamine receptor H4##AB044934|HRH4|59340|histamine receptor H4##AF307973|HRH4|59340|histamine receptor H4##AF325356|HRH4|59340|histamine receptor H4##AF329449|HRH4|59340|histamine receptor H4##AJ298292|HRH4|59340|histamine receptor H4##AY008280|HRH4|59340|histamine receptor H4##AY136745|HRH4|59340|histamine receptor H4##DQ835186|HRH4|59340|histamine receptor H4##DQ835187|HRH4|59340|histamine receptor H4##AK312727|IMPACT|55364|Impact homolog (mouse)##BC034016|IMPACT|55364|Impact homolog (mouse)##AB026264|IMPACT|55364|Impact homolog (mouse)##DQ893141|IMPACT|55364|Impact homolog (mouse)##EU176771|IMPACT|55364|Impact homolog (mouse)##AF208694|IMPACT|55364|Impact homolog (mouse)##AK292533|IMPACT|55364|Impact homolog (mouse)##NM_018439|IMPACT|55364|Impact homolog (mouse)##BC036074|IMPACT|55364|Impact homolog (mouse)##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521	0.0	
chr18	525734	525871	reg1044087.p2	3.612	+	AB005145 TSC_hg19_v1_chr18_-_500702 BC060789 AB038518 NM_130386	-25118	-	AK097544 TSC_hg19_v1_chr18_+_268153	-257649	+	TSC_hg19_v1_chr18_-_268046 AY573302 AY573303 CU679685 DQ892768 EU176747 AK225709 L36529 AK314755 AK225067 BC010381 NM_005131	-257769	-	BC029515 NM_004066 U03270 AK312047 CU688680 DQ890970 DQ894144	54580	+	BC025381 NM_014410 AK299319	71207	+	DQ980621 NM_199167 AF395889 D63813	90893	+	AB005145|COLEC12|81035|collectin sub-family member 12##BC060789|COLEC12|81035|collectin sub-family member 12##AB038518|COLEC12|81035|collectin sub-family member 12##NM_130386|COLEC12|81035|collectin sub-family member 12##AY573302|THOC1|9984|THO complex 1##AY573303|THOC1|9984|THO complex 1##DQ892768|THOC1|9984|THO complex 1##EU176747|THOC1|9984|THO complex 1##AK225709|THOC1|9984|THO complex 1##L36529|THOC1|9984|THO complex 1##AK314755|THOC1|9984|THO complex 1##AK225067|THOC1|9984|THO complex 1##BC010381|THOC1|9984|THO complex 1##NM_005131|THOC1|9984|THO complex 1##BC029515|CETN1|1068|centrin, EF-hand protein, 1##NM_004066|CETN1|1068|centrin, EF-hand protein, 1##U03270|CETN1|1068|centrin, EF-hand protein, 1##AK312047|CETN1|1068|centrin, EF-hand protein, 1##DQ890970|CETN1|1068|centrin, EF-hand protein, 1##DQ894144|CETN1|1068|centrin, EF-hand protein, 1##BC025381|CLUL1|27098|clusterin-like 1 (retinal)##NM_014410|CLUL1|27098|clusterin-like 1 (retinal)##AK299319|CLUL1|27098|clusterin-like 1 (retinal)##DQ980621|CLUL1|27098|clusterin-like 1 (retinal)##NM_199167|CLUL1|27098|clusterin-like 1 (retinal)##AF395889|CLUL1|27098|clusterin-like 1 (retinal)##D63813|CLUL1|27098|clusterin-like 1 (retinal)	0.0	
chr22	50640119	50640185	reg1030156.p1	3.612	+	CR456464 BC001099 CU013014 CU013302 TSC_hg19_v1_chr22_+_50640050	-182	+	TSC_hg19_v1_chr22_+_50639439 AY324823 NM_031454 BC110866 BC051758	-714	+	TSC_hg19_v1_chr22_+_50624353 BC012445 AL449244 NM_025204 AK292050 AY203945	-15771	+	AB051456 TSC_hg19_v1_chr22_-_50682891	42694	-	TSC_hg19_v1_chr22_-_50682948 BC144488 BC144489 BC150613 AF272887	42820	-	TSC_hg19_v1_chr22_-_50683439 BC151209 NM_020461 AL832617 AK310419	43278	-	CR456464|SELO|83642|selenoprotein O##BC001099|SELO|83642|selenoprotein O##AY324823|SELO|83642|selenoprotein O##NM_031454|SELO|83642|selenoprotein O##BC110866|SELO|83642|selenoprotein O##BC051758|SELO|83642|selenoprotein O##BC012445|TRABD|80305|TraB domain containing##AL449244|TRABD|80305|TraB domain containing##NM_025204|TRABD|80305|TraB domain containing##AK292050|TRABD|80305|TraB domain containing##AY203945|TRABD|80305|TraB domain containing##AB051456|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC144488|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC144489|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC150613|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AF272887|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC151209|TUBGCP6|85378|tubulin, gamma complex associated protein 6##NM_020461|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AL832617|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AK310419|TUBGCP6|85378|tubulin, gamma complex associated protein 6	0.0	
chr3	53208671	53208737	reg1023604.p2	3.612	+	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	-13485	+	TSC_hg19_v1_chr3_-_53164452 AJ318099 BC043595 NM_052859	-44253	-	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	-128641	-	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	81307	-	TSC_hg19_v1_chr3_-_53290099 NM_001064 NM_001135055	81410	-	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	172889	-	BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##AJ318099|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043595|RFT1|91869|RFT1 homolog (S. cerevisiae)##NM_052859|RFT1|91869|RFT1 homolog (S. cerevisiae)##AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase##NM_001064|TKT|7086|transketolase##NM_001135055|TKT|7086|transketolase##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	0.0	
chr5	131813126	131813194	reg1031199.p1	3.612	+	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-66532	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-107652	+	BX538252 TSC_hg19_v1_chr5_-_131705330	-107861	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	13321	-	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	66032	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	79480	+	AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BX538252|LOC553103|553103|uncharacterized LOC553103##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)	0.014137	
chr11	19541016	19541126	reg1038350.p2	3.611	+	AB063115 NM_001111018 AJ488205	-168756	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-277870	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-278596	-	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	193795	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	503317	+	TSC_hg19_v1_chr11_+_20049136 AK307574	508061	+	AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2	0.0	
chr11	94254975	94255117	reg1033456.p1	3.611	+	NM_001190462	-9352	+	TSC_hg19_v1_chr11_+_94227168 NM_017704 AF025354 AK000196 BC017798 AK000448 AL833977	-27888	+	U37359 TSC_hg19_v1_chr11_-_94227011 BC017823 BC005241 AK095388 AF022778 AK308318 NM_005590 NM_005591	-28073	-	AK293616 NM_002033 TSC_hg19_v1_chr11_+_94277086 M58597 BC136373 BC136374	22033	+	TSC_hg19_v1_chr11_+_94277605 M58596	22553	+	NM_152431 AB079366 AK093475 AX748151 BC031060 DQ891240 DQ894425 AB590313 CU689100	45532	+	NM_001190462|LOC643037|643037|uncharacterized LOC643037##NM_017704|ANKRD49|54851|ankyrin repeat domain 49##AF025354|ANKRD49|54851|ankyrin repeat domain 49##AK000196|ANKRD49|54851|ankyrin repeat domain 49##BC017798|ANKRD49|54851|ankyrin repeat domain 49##AK000448|ANKRD49|54851|ankyrin repeat domain 49##AL833977|ANKRD49|54851|ankyrin repeat domain 49##U37359|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC017823|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##BC005241|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK095388|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AF022778|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK308318|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005590|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##NM_005591|MRE11A|4361|MRE11 meiotic recombination 11 homolog A (S. cerevisiae)##AK293616|PIWIL4|143689|piwi-like 4 (Drosophila)##NM_002033|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58597|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136373|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##BC136374|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##M58596|FUT4|2526|fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)##NM_152431|PIWIL4|143689|piwi-like 4 (Drosophila)##AB079366|PIWIL4|143689|piwi-like 4 (Drosophila)##AK093475|PIWIL4|143689|piwi-like 4 (Drosophila)##BC031060|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ891240|PIWIL4|143689|piwi-like 4 (Drosophila)##DQ894425|PIWIL4|143689|piwi-like 4 (Drosophila)	0.054537	
chr15	58407959	58408057	reg1038081.p2	3.611	+	NM_001206897 NM_003888 NM_170696	-49888	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	-50130	-	AB015228 AB015227 NM_170697	-101769	-	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	22478	+	NM_000236 X07228 AK293324 AK309448 TSC_hg19_v1_chr15_+_58724189 D83548 BC132825 BC136495 J03895 J03540 AB528021 HQ258274	316194	+	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	633781	-	NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9##NM_000236|LIPC|3990|lipase, hepatic##X07228|LIPC|3990|lipase, hepatic##AK293324|LIPC|3990|lipase, hepatic##AK309448|LIPC|3990|lipase, hepatic##D83548|LIPC|3990|lipase, hepatic##BC132825|LIPC|3990|lipase, hepatic##BC136495|LIPC|3990|lipase, hepatic##J03895|LIPC|3990|lipase, hepatic##J03540|LIPC|3990|lipase, hepatic##HQ258274|LIPC|3990|lipase, hepatic##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10	0.820598	CTCF.p2:-2:0.821
chr15	58810722	58810803	reg1031529.p2	3.611	+	NM_000236 X07228 AK293324 AK309448 TSC_hg19_v1_chr15_+_58724189 D83548 BC132825 BC136495 J03895 J03540 AB528021 HQ258274	-86560	+	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	-380276	+	NM_001206897 NM_003888 NM_170696	-452642	-	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	231027	-	TSC_hg19_v1_chr15_-_59041833 AK300472	231060	-	TSC_hg19_v1_chr15_-_59041988 BC126253 BC143935 NM_001110	231292	-	NM_000236|LIPC|3990|lipase, hepatic##X07228|LIPC|3990|lipase, hepatic##AK293324|LIPC|3990|lipase, hepatic##AK309448|LIPC|3990|lipase, hepatic##D83548|LIPC|3990|lipase, hepatic##BC132825|LIPC|3990|lipase, hepatic##BC136495|LIPC|3990|lipase, hepatic##J03895|LIPC|3990|lipase, hepatic##J03540|LIPC|3990|lipase, hepatic##HQ258274|LIPC|3990|lipase, hepatic##AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10##AK300472|ADAM10|102|ADAM metallopeptidase domain 10##BC126253|ADAM10|102|ADAM metallopeptidase domain 10##BC143935|ADAM10|102|ADAM metallopeptidase domain 10##NM_001110|ADAM10|102|ADAM metallopeptidase domain 10	0.0	
chr17	16884320	16884444	reg1028932.p2	3.611	+	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	-8978	-	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-290778	+	AK131401 NM_020787	-327221	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	61582	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	225231	-	TSC_hg19_v1_chr17_-_17109636 BC031263 AK295282 NM_178836	225275	-	AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6##BC031263|PLD6|201164|phospholipase D family, member 6##AK295282|PLD6|201164|phospholipase D family, member 6##NM_178836|PLD6|201164|phospholipase D family, member 6	0.0	
chr18	74204753	74204933	reg1039483.p2	3.611	+	BC108287 TSC_hg19_v1_chr18_-_74092260	-112593	-	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-1065221	-	TSC_hg19_v1_chr18_+_72998258 AK223545 BC024152	-1206501	+	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	2312	-	TSC_hg19_v1_chr18_-_74534239 BC032908	329396	-	TSC_hg19_v1_chr18_+_74534512 BX648028	329667	+	BC108287|ZNF516|9658|zinc finger protein 516##BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1##BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1##D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC032908|LOC100131655|100131655|uncharacterized LOC100131655##BX648028|ZNF236|7776|zinc finger protein 236	0.0	
chr19	16740148	16740214	reg1035846.p2	3.611	+	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	-1181	-	TSC_hg19_v1_chr19_+_16683381 AK094229	-56784	+	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	-56985	-	TSC_hg19_v1_chr19_-_16770944 AK025602 BC069279 BX648276	30748	-	TSC_hg19_v1_chr19_-_16770956 NM_024104	30781	-	TSC_hg19_v1_chr19_+_16771949 AK025981 NM_024074 AK292764 BC001195	31785	+	AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26##BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##AK025602|C19orf42|79086|chromosome 19 open reading frame 42##BC069279|C19orf42|79086|chromosome 19 open reading frame 42##BX648276|C19orf42|79086|chromosome 19 open reading frame 42##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42##AK025981|TMEM38A|79041|transmembrane protein 38A##NM_024074|TMEM38A|79041|transmembrane protein 38A##AK292764|TMEM38A|79041|transmembrane protein 38A##BC001195|TMEM38A|79041|transmembrane protein 38A	0.0	
chr2	157287598	157287686	reg1034541.p1	3.611	+	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	-98479	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	-100952	-	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-1732453	+	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	4316	+	TSC_hg19_v1_chr2_+_157291981 AK290057	4363	+	TSC_hg19_v1_chr2_+_157292178 AB209399 U36310 AK299645	4592	+	S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK290057|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AB209399|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U36310|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK299645|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	0.0	
chr2	201677180	201677360	reg1036321.p1	3.611	+	TSC_hg19_v1_chr2_+_201676774 AK301511 NM_001207069 NM_001207068 AK297227 AB590046	-318	+	AK223245 BC026303 TSC_hg19_v1_chr2_+_201676659	-610	+	D13630 TSC_hg19_v1_chr2_+_201676645 BC001804	-624	+	TSC_hg19_v1_chr2_-_201729241 AK294295 NM_001162407	51992	-	TSC_hg19_v1_chr2_-_201729351 BC028149 BC031549	52086	-	TSC_hg19_v1_chr2_-_201729384 AK307301 BC028573 AK289365 NM_004071	52151	-	AK301511|BZW1|9689|basic leucine zipper and W2 domains 1##NM_001207069|BZW1|9689|basic leucine zipper and W2 domains 1##NM_001207068|BZW1|9689|basic leucine zipper and W2 domains 1##AK297227|BZW1|9689|basic leucine zipper and W2 domains 1##AK223245|BZW1|9689|basic leucine zipper and W2 domains 1##BC026303|BZW1|9689|basic leucine zipper and W2 domains 1##D13630|BZW1|9689|basic leucine zipper and W2 domains 1##BC001804|BZW1|9689|basic leucine zipper and W2 domains 1##AK294295|CLK1|1195|CDC-like kinase 1##NM_001162407|CLK1|1195|CDC-like kinase 1##BC028149|CLK1|1195|CDC-like kinase 1##BC031549|CLK1|1195|CDC-like kinase 1##AK307301|CLK1|1195|CDC-like kinase 1##BC028573|CLK1|1195|CDC-like kinase 1##AK289365|CLK1|1195|CDC-like kinase 1##NM_004071|CLK1|1195|CDC-like kinase 1	0.040331	
chr3	10183869	10183945	reg1040285.p2	3.611	+	TSC_hg19_v1_chr3_+_10183517 AB528056	-369	+	AK304002 TSC_hg19_v1_chr3_+_10183487	-409	+	L15409 NM_000551 NM_198156 TSC_hg19_v1_chr3_+_10183474 AK315799 BC058831 BC027957	-505	+	NM_001570 BC125184 AK299033 AK312841 TSC_hg19_v1_chr3_+_10206602 AF026273 AB587544 AJ496794	22693	+	TSC_hg19_v1_chr3_+_10290182 NM_014760	106268	+	TSC_hg19_v1_chr3_+_10290210 D86972	106355	+	AK304002|VHL|7428|von Hippel-Lindau tumor suppressor##L15409|VHL|7428|von Hippel-Lindau tumor suppressor##NM_000551|VHL|7428|von Hippel-Lindau tumor suppressor##NM_198156|VHL|7428|von Hippel-Lindau tumor suppressor##AK315799|VHL|7428|von Hippel-Lindau tumor suppressor##BC058831|VHL|7428|von Hippel-Lindau tumor suppressor##BC027957|VHL|7428|von Hippel-Lindau tumor suppressor##NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2##BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2##NM_014760|TATDN2|9797|TatD DNase domain containing 2##D86972|TATDN2|9797|TatD DNase domain containing 2	0.0	
chr3	119396466	119396591	reg1035985.p1	3.611	+	TSC_hg19_v1_chr3_-_119396232 AK312143 BC105280 BC010933 L77701 NM_005694 BC108317	-282	-	CU692240 AF204173 NM_022135 AK314819 BC044929	-17176	-	NM_001206960 NM_001206961 NM_015900 AK301880 AK222705 AK313519 BC035347 BC047703 U37591 AF035268 AF035269 AB527604 CU690470	-79801	+	TSC_hg19_v1_chr3_+_119421876 AF440403 BC035248 CR749242 NM_033364 AF497717 AK055558 BC126394 AK302699 AK309317 AK294413 AK303997 AK289914 HQ258654	25374	+	AJ009936 AJ009937 NM_003889 NM_033013	102802	+	AF061056 AK310789 AK223456 TSC_hg19_v1_chr3_+_119500896	104354	+	AK312143|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC105280|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC010933|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##L77701|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_005694|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC108317|COX17|10063|COX17 cytochrome c oxidase assembly homolog (S. cerevisiae)##AF204173|POPDC2|64091|popeye domain containing 2##NM_022135|POPDC2|64091|popeye domain containing 2##AK314819|POPDC2|64091|popeye domain containing 2##BC044929|POPDC2|64091|popeye domain containing 2##NM_001206960|PLA1A|51365|phospholipase A1 member A##NM_001206961|PLA1A|51365|phospholipase A1 member A##NM_015900|PLA1A|51365|phospholipase A1 member A##AK301880|PLA1A|51365|phospholipase A1 member A##AK222705|PLA1A|51365|phospholipase A1 member A##AK313519|PLA1A|51365|phospholipase A1 member A##BC035347|PLA1A|51365|phospholipase A1 member A##BC047703|PLA1A|51365|phospholipase A1 member A##U37591|PLA1A|51365|phospholipase A1 member A##AF035268|PLA1A|51365|phospholipase A1 member A##AF035269|PLA1A|51365|phospholipase A1 member A##AF440403|C3orf15|89876|chromosome 3 open reading frame 15##BC035248|C3orf15|89876|chromosome 3 open reading frame 15##CR749242|C3orf15|89876|chromosome 3 open reading frame 15##NM_033364|C3orf15|89876|chromosome 3 open reading frame 15##AF497717|C3orf15|89876|chromosome 3 open reading frame 15##AK055558|C3orf15|89876|chromosome 3 open reading frame 15##BC126394|C3orf15|89876|chromosome 3 open reading frame 15##AK302699|C3orf15|89876|chromosome 3 open reading frame 15##AK309317|C3orf15|89876|chromosome 3 open reading frame 15##AK294413|C3orf15|89876|chromosome 3 open reading frame 15##AK303997|C3orf15|89876|chromosome 3 open reading frame 15##AK289914|C3orf15|89876|chromosome 3 open reading frame 15##HQ258654|C3orf15|89876|chromosome 3 open reading frame 15##AJ009936|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AJ009937|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##NM_003889|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##NM_033013|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AF061056|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AK310789|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2##AK223456|NR1I2|8856|nuclear receptor subfamily 1, group I, member 2	0.0	
chr4	150835798	150835894	reg1037999.p1	3.611	+	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	-1472262	-	TSC_hg19_v1_chr4_-_149363305 BC111758	-1472507	-	TSC_hg19_v1_chr4_-_149357955 AB587357	-1477864	-	TSC_hg19_v1_chr4_+_150999584 AB209181 NM_001040260 NM_001040261	163679	+	NM_006439	667230	+	TSC_hg19_v1_chr4_-_151770612 AB208838	934803	-	AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AB209181|DCLK2|166614|doublecortin-like kinase 2##NM_001040260|DCLK2|166614|doublecortin-like kinase 2##NM_001040261|DCLK2|166614|doublecortin-like kinase 2##NM_006439|MAB21L2|10586|mab-21-like 2 (C. elegans)##AB208838|LRBA|987|LPS-responsive vesicle trafficking, beach and anchor containing	0.805311	CTCF.p2:6:0.596	CTCF.p2:-36:0.210
chr6	96916934	96917052	reg1037564.p1	3.611	+	NM_006581 AK314966 TSC_hg19_v1_chr6_+_96463867 BC001879 BC036101 AB023021	-453126	+	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	-891592	+	TSC_hg19_v1_chr6_-_96025325 BC047582	-891704	-	TSC_hg19_v1_chr6_+_96969716 NM_015323 BC015377 AK307651 BC036379 BC028608	52706	+	TSC_hg19_v1_chr6_+_96969734 AB018319 CU690338	52746	+	NM_001170807 NM_020482 AK058175 BC029490 BC021723 AK223539	93476	+	NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha##NM_015323|UFL1|23376|UFM1-specific ligase 1##BC015377|UFL1|23376|UFM1-specific ligase 1##AK307651|UFL1|23376|UFM1-specific ligase 1##BC036379|UFL1|23376|UFM1-specific ligase 1##BC028608|UFL1|23376|UFM1-specific ligase 1##AB018319|UFL1|23376|UFM1-specific ligase 1##NM_001170807|FHL5|9457|four and a half LIM domains 5##NM_020482|FHL5|9457|four and a half LIM domains 5##AK058175|FHL5|9457|four and a half LIM domains 5##BC029490|FHL5|9457|four and a half LIM domains 5##BC021723|FHL5|9457|four and a half LIM domains 5##AK223539|FHL5|9457|four and a half LIM domains 5	0.938852	CTCF.p2:18:0.939
chr7	92239367	92239440	reg1034316.p1	3.611	+	TSC_hg19_v1_chr7_-_92219705 BC079834 BC090868 BC057771 AK125498 AL833918 BC017874 NM_001040057 NM_152789 BC062706	-19705	-	TSC_hg19_v1_chr7_-_92219660 BC032461 BC157872	-19761	-	BC104865 BC104867 BC143576 NM_032120 CR933641 BC044570 AL136619 BC020919 BC033561 CR936726 AK294626 AK294812 AF161422 BC065716 CR533549	-81297	+	AB528631 CU690894 X66365 TSC_hg19_v1_chr7_-_92462894	223364	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	223817	-	AK313491 TSC_hg19_v1_chr7_-_92465884	226495	-	BC090868|FAM133B|257415|family with sequence similarity 133, member B##BC057771|FAM133B|257415|family with sequence similarity 133, member B##AK125498|FAM133B|257415|family with sequence similarity 133, member B##AL833918|FAM133B|257415|family with sequence similarity 133, member B##BC017874|FAM133B|257415|family with sequence similarity 133, member B##NM_001040057|FAM133B|257415|family with sequence similarity 133, member B##NM_152789|FAM133B|257415|family with sequence similarity 133, member B##BC062706|FAM133B|257415|family with sequence similarity 133, member B##BC032461|FAM133B|257415|family with sequence similarity 133, member B##BC157872|FAM133B|257415|family with sequence similarity 133, member B##BC104865|RBM48|84060|RNA binding motif protein 48##BC104867|RBM48|84060|RNA binding motif protein 48##BC143576|RBM48|84060|RNA binding motif protein 48##NM_032120|RBM48|84060|RNA binding motif protein 48##CR933641|RBM48|84060|RNA binding motif protein 48##BC044570|RBM48|84060|RNA binding motif protein 48##AL136619|RBM48|84060|RNA binding motif protein 48##BC020919|RBM48|84060|RNA binding motif protein 48##BC033561|RBM48|84060|RNA binding motif protein 48##CR936726|RBM48|84060|RNA binding motif protein 48##AK294626|RBM48|84060|RNA binding motif protein 48##AK294812|RBM48|84060|RNA binding motif protein 48##AF161422|RBM48|84060|RNA binding motif protein 48##BC065716|RBM48|84060|RNA binding motif protein 48##CR533549|RBM48|84060|RNA binding motif protein 48##X66365|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6	0.913248	CTCF.p2:4:0.913
chr8	38835364	38835458	reg1029320.p2	3.611	+	NM_153692 AK075205 BC057765 AK300197	-3702	+	AK098787 NM_021623 TSC_hg19_v1_chr8_+_38758793 AK296068 AK291842 AF286164	-76600	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	-190643	+	AL834224 BC004878 BC109050 BC109049 AF353991 AK075027 TSC_hg19_v1_chr8_-_38854016 AK225093	18601	-	TSC_hg19_v1_chr8_-_38854029 AK314703 AK075155 NM_001024380 NM_001024381 NM_031940 NM_078473	18621	-	TSC_hg19_v1_chr8_+_38854491 BC027996 NM_003816 U41766	19065	+	NM_153692|HTRA4|203100|HtrA serine peptidase 4##AK075205|HTRA4|203100|HtrA serine peptidase 4##BC057765|HTRA4|203100|HtrA serine peptidase 4##AK300197|HTRA4|203100|HtrA serine peptidase 4##AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AL834224|TM2D2|83877|TM2 domain containing 2##BC004878|TM2D2|83877|TM2 domain containing 2##BC109050|TM2D2|83877|TM2 domain containing 2##BC109049|TM2D2|83877|TM2 domain containing 2##AF353991|TM2D2|83877|TM2 domain containing 2##AK075027|TM2D2|83877|TM2 domain containing 2##AK225093|TM2D2|83877|TM2 domain containing 2##AK314703|TM2D2|83877|TM2 domain containing 2##AK075155|TM2D2|83877|TM2 domain containing 2##NM_001024380|TM2D2|83877|TM2 domain containing 2##NM_001024381|TM2D2|83877|TM2 domain containing 2##NM_031940|TM2D2|83877|TM2 domain containing 2##NM_078473|TM2D2|83877|TM2 domain containing 2##BC027996|ADAM9|8754|ADAM metallopeptidase domain 9##NM_003816|ADAM9|8754|ADAM metallopeptidase domain 9##U41766|ADAM9|8754|ADAM metallopeptidase domain 9	0.0	
chrX	9612428	9612579	reg1031588.p1	3.611	+	TSC_hg19_v1_chrX_+_9433108 Y12781 BC052304 NM_005647	-179269	+	TSC_hg19_v1_chrX_+_9431357 AK289409 NM_001139466 NM_001139467 NM_001139468 AK290962 BC032708	-181156	+	BC120955 BC120956 NM_205849	-611401	-	Z48804 BC015657 BC068977 NM_000273	121457	-	TSC_hg19_v1_chrX_+_9754468 NM_001649 X83543	141977	+	BC140866 TSC_hg19_v1_chrX_+_9754543	142040	+	Y12781|TBL1X|6907|transducin (beta)-like 1X-linked##BC052304|TBL1X|6907|transducin (beta)-like 1X-linked##NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked##AK289409|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139466|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139467|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139468|TBL1X|6907|transducin (beta)-like 1X-linked##AK290962|TBL1X|6907|transducin (beta)-like 1X-linked##BC032708|TBL1X|6907|transducin (beta)-like 1X-linked##BC120955|FAM9B|171483|family with sequence similarity 9, member B##BC120956|FAM9B|171483|family with sequence similarity 9, member B##NM_205849|FAM9B|171483|family with sequence similarity 9, member B##Z48804|GPR143|4935|G protein-coupled receptor 143##BC015657|GPR143|4935|G protein-coupled receptor 143##BC068977|GPR143|4935|G protein-coupled receptor 143##NM_000273|GPR143|4935|G protein-coupled receptor 143##NM_001649|SHROOM2|357|shroom family member 2##X83543|SHROOM2|357|shroom family member 2##BC140866|SHROOM2|357|shroom family member 2	0.0	
chr1	110198772	110198866	reg1031653.p2	3.610	+	TSC_hg19_v1_chr1_+_110198727 DQ062813 AK311000 BC015513 M99422 M96234 BC108729	-67	+	AK291880 NM_000850 NM_147148 TSC_hg19_v1_chr1_+_110198723	-109	+	NM_203404 S47833	-30771	+	M99421 TSC_hg19_v1_chr1_+_110198960 AB590400 DQ890658 DQ890659 DQ893839 BT019947 CR541869 CU677329	124	+	NM_000848 NM_001142368 BC017836 BC110380 TSC_hg19_v1_chr1_+_110210704 AK309796 BC105038 BC105066 M63509	11864	+	NM_000561 NM_146421 TSC_hg19_v1_chr1_+_110230438 BC024005 BC095463 X08020 BC036805 J03817 GQ129273 GQ129274 AB590610 CU692840 AY510272 AY532926 AY532927 CR541868	31637	+	DQ062813|GSTM4|2948|glutathione S-transferase mu 4##BC015513|GSTM4|2948|glutathione S-transferase mu 4##M99422|GSTM4|2948|glutathione S-transferase mu 4##M96234|GSTM4|2948|glutathione S-transferase mu 4##BC108729|GSTM4|2948|glutathione S-transferase mu 4##AK291880|GSTM4|2948|glutathione S-transferase mu 4##NM_000850|GSTM4|2948|glutathione S-transferase mu 4##NM_147148|GSTM4|2948|glutathione S-transferase mu 4##NM_203404|AMPD2|271|adenosine monophosphate deaminase 2##S47833|AMPD2|271|adenosine monophosphate deaminase 2##M99421|GSTM4|2948|glutathione S-transferase mu 4##DQ890658|GSTM4|2948|glutathione S-transferase mu 4##DQ890659|GSTM4|2948|glutathione S-transferase mu 4##DQ893839|GSTM4|2948|glutathione S-transferase mu 4##BT019947|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##CR541869|GSTM4|2948|glutathione S-transferase mu 4##NM_000848|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##NM_001142368|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##BC017836|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##BC110380|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##AK309796|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##BC105038|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##BC105066|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##M63509|GSTM2|2946|glutathione S-transferase mu 2 (muscle)##NM_000561|GSTM1|2944|glutathione S-transferase mu 1##NM_146421|GSTM1|2944|glutathione S-transferase mu 1##BC024005|GSTM1|2944|glutathione S-transferase mu 1##BC095463|GSTM1|2944|glutathione S-transferase mu 1##X08020|GSTM1|2944|glutathione S-transferase mu 1##BC036805|GSTM1|2944|glutathione S-transferase mu 1##J03817|GSTM1|2944|glutathione S-transferase mu 1##GQ129273|GSTM1|2944|glutathione S-transferase mu 1##GQ129274|GSTM1|2944|glutathione S-transferase mu 1##AY510272|GSTM1|2944|glutathione S-transferase mu 1##AY532926|GSTM1|2944|glutathione S-transferase mu 1##AY532927|GSTM1|2944|glutathione S-transferase mu 1##CR541868|GSTM1|2944|glutathione S-transferase mu 1	0.0	
chr11	118922603	118922706	reg1036895.p1	3.610	+	BC014663 AB209026 TSC_hg19_v1_chr11_-_118901588 AK294993 AK298395 AK300646 AK289642 AK312628 NM_001164277 NM_001164278 NM_001164279 NM_001467	-21060	-	AF110819 AF110820 AF110821 AF110822 CR456733 CU677381 AY423732 TSC_hg19_v1_chr11_-_118900155 Y15409 BC064563 BC002400 BC003589 NM_001164280	-22477	-	TSC_hg19_v1_chr11_+_118889482 AF161520 AK025623 AK290520 AK293914 AK293977 AK297422 BC010866	-33200	+	TSC_hg19_v1_chr11_-_118927762 BC017726 AK297260	5115	-	TSC_hg19_v1_chr11_-_118927824 BC072436 U65785	5169	-	TSC_hg19_v1_chr11_-_118927846 AK222756 AK294905 DQ350134 DQ372932 AK301514 AK314178 AK304264	5187	-	BC014663|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AB209026|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AK294993|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AK298395|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AK300646|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AK289642|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AK312628|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##NM_001164277|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##NM_001164278|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##NM_001164279|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##NM_001467|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AF110819|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AF110820|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AF110821|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AF110822|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##CR456733|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AY423732|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##Y15409|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##BC064563|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##BC002400|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##BC003589|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##NM_001164280|SLC37A4|2542|solute carrier family 37 (glucose-6-phosphate transporter), member 4##AF161520|TRAPPC4|51399|trafficking protein particle complex 4##AK025623|TRAPPC4|51399|trafficking protein particle complex 4##AK290520|TRAPPC4|51399|trafficking protein particle complex 4##AK293914|TRAPPC4|51399|trafficking protein particle complex 4##AK293977|TRAPPC4|51399|trafficking protein particle complex 4##AK297422|TRAPPC4|51399|trafficking protein particle complex 4##BC010866|TRAPPC4|51399|trafficking protein particle complex 4##BC017726|HYOU1|10525|hypoxia up-regulated 1##AK297260|HYOU1|10525|hypoxia up-regulated 1##BC072436|HYOU1|10525|hypoxia up-regulated 1##U65785|HYOU1|10525|hypoxia up-regulated 1##AK222756|HYOU1|10525|hypoxia up-regulated 1##AK294905|HYOU1|10525|hypoxia up-regulated 1##DQ350134|HYOU1|10525|hypoxia up-regulated 1##DQ372932|HYOU1|10525|hypoxia up-regulated 1##AK301514|HYOU1|10525|hypoxia up-regulated 1##AK314178|HYOU1|10525|hypoxia up-regulated 1##AK304264|HYOU1|10525|hypoxia up-regulated 1	0.0	
chr11	128480755	128480857	reg1031892.p1	3.610	+	BX640634 NM_001143820	-23354	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	-88672	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	-88843	-	TSC_hg19_v1_chr11_+_128563793 NM_001167681 NM_002017	82992	+	TSC_hg19_v1_chr11_+_128563966 AK313370	83155	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	83174	+	BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001167681|FLI1|2313|Friend leukemia virus integration 1##NM_002017|FLI1|2313|Friend leukemia virus integration 1##AK313370|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1	0.0	
chr1	2585492	2585672	reg1037971.p1	3.610	+	AK093058 AX747891 NM_033467 TSC_hg19_v1_chr1_-_2564497	-21117	-	TSC_hg19_v1_chr1_+_2518534 AK094901	-67068	+	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	-67394	+	NM_001242672	120647	-	NM_080431 AK058153 AK314500 BC029499	352473	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	400194	+	AK093058|MMEL1|79258|membrane metallo-endopeptidase-like 1##NM_033467|MMEL1|79258|membrane metallo-endopeptidase-like 1##AK094901|FAM213B|127281|family with sequence similarity 213, member B##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B##NM_001242672|TTC34|100287898|tetratricopeptide repeat domain 34##NM_080431|ACTRT2|140625|actin-related protein T2##AK058153|ACTRT2|140625|actin-related protein T2##AK314500|ACTRT2|140625|actin-related protein T2##BC029499|ACTRT2|140625|actin-related protein T2##NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16	0.0	
chr14	100763705	100763830	reg1040169.p1	3.610	+	TSC_hg19_v1_chr14_+_100705474 BC037308 M76541 BC020324 BC065366 AB464361 DQ891638 EU176600 CU691478	-58261	+	TSC_hg19_v1_chr14_+_100705309 M77698	-58455	+	NM_003403 TSC_hg19_v1_chr14_+_100705177	-58625	+	TSC_hg19_v1_chr14_-_100772779 AK096294 AK123821 AK310069 BC142945 AK172788 BX247983 NM_001039355	9072	-	AK092001 AX747302 TSC_hg19_v1_chr14_+_100789675 AB073385 AY569438 AY570298 NM_207117 BX248260 BC137253 BC137254 BC144549	25919	+	X59892 TSC_hg19_v1_chr14_-_100841685 BC095453 M61715	77924	-	BC037308|YY1|7528|YY1 transcription factor##M76541|YY1|7528|YY1 transcription factor##BC020324|YY1|7528|YY1 transcription factor##BC065366|YY1|7528|YY1 transcription factor##DQ891638|YY1|7528|YY1 transcription factor##EU176600|YY1|7528|YY1 transcription factor##M77698|YY1|7528|YY1 transcription factor##NM_003403|YY1|7528|YY1 transcription factor##AK096294|SLC25A29|123096|solute carrier family 25, member 29##AK123821|SLC25A29|123096|solute carrier family 25, member 29##AK310069|SLC25A29|123096|solute carrier family 25, member 29##AK172788|SLC25A29|123096|solute carrier family 25, member 29##BX247983|SLC25A29|123096|solute carrier family 25, member 29##NM_001039355|SLC25A29|123096|solute carrier family 25, member 29##AK092001|SLC25A47|283600|solute carrier family 25, member 47##AB073385|SLC25A47|283600|solute carrier family 25, member 47##AY569438|SLC25A47|283600|solute carrier family 25, member 47##AY570298|SLC25A47|283600|solute carrier family 25, member 47##NM_207117|SLC25A47|283600|solute carrier family 25, member 47##BX248260|SLC25A47|283600|solute carrier family 25, member 47##BC137253|SLC25A47|283600|solute carrier family 25, member 47##BC137254|SLC25A47|283600|solute carrier family 25, member 47##BC144549|SLC25A47|283600|solute carrier family 25, member 47##X59892|WARS|7453|tryptophanyl-tRNA synthetase##BC095453|WARS|7453|tryptophanyl-tRNA synthetase##M61715|WARS|7453|tryptophanyl-tRNA synthetase	0.0	
chr2	173991746	173991869	reg1034948.p2	3.610	+	AB030034 TSC_hg19_v1_chr2_+_173940603 AF465843 AK298634 BC001401 AK291825 AF251441	-51159	+	TSC_hg19_v1_chr2_+_173940576 AK056310 NM_016653 NM_133646 AF480461 AF480462	-51261	+	AB208974 TSC_hg19_v1_chr2_+_173940455	-51359	+	TSC_hg19_v1_chr2_+_174219599 AY029179 NM_031942 NM_145810 AK027642 AK027628 BC027966 AK075134 AK297097 AK300949 AK297245 AL834186 CU693352 AB527763	227806	+	AK023489 TSC_hg19_v1_chr2_-_174767427	775547	-	X68560 TSC_hg19_v1_chr2_-_174828559 M97191	836740	-	AB030034|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF465843|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK298634|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##BC001401|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK291825|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF251441|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AK056310|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_016653|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##NM_133646|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480461|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AF480462|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AB208974|ZAK|51776|sterile alpha motif and leucine zipper containing kinase AZK##AY029179|CDCA7|83879|cell division cycle associated 7##NM_031942|CDCA7|83879|cell division cycle associated 7##NM_145810|CDCA7|83879|cell division cycle associated 7##AK027642|CDCA7|83879|cell division cycle associated 7##AK027628|CDCA7|83879|cell division cycle associated 7##BC027966|CDCA7|83879|cell division cycle associated 7##AK075134|CDCA7|83879|cell division cycle associated 7##AK297097|CDCA7|83879|cell division cycle associated 7##AK300949|CDCA7|83879|cell division cycle associated 7##AK297245|CDCA7|83879|cell division cycle associated 7##AL834186|CDCA7|83879|cell division cycle associated 7##X68560|SP3|6670|Sp3 transcription factor##M97191|SP3|6670|Sp3 transcription factor	0.0	
chr22	31501001	31501127	reg1039885.p1	3.610	+	AK092684 AX747671 TSC_hg19_v1_chr22_+_31489351 AK095930 AK300064 AK309502 AK095916	-11710	+	TSC_hg19_v1_chr22_+_31487319 AK301289 AK307627 AK225648 Z49989	-13740	+	AK128627 AK295418 NM_001207018 TSC_hg19_v1_chr22_+_31481009	-20063	+	TSC_hg19_v1_chr22_-_31503490 CU680602 BC013421 BC030236 BC042299 BC068004 NM_080430 AK308582	2468	-	TSC_hg19_v1_chr22_+_31518979 AK092859 AK293992 AX747773 BC041652 NM_001002837 AK309548 AK095944 AK126610 BC109288	17895	+	DQ892832 DQ896078 BC025316 NM_015715 AF220490	35401	-	AK092684|SMTN|6525|smoothelin##AK095930|SMTN|6525|smoothelin##AK300064|SMTN|6525|smoothelin##AK309502|SMTN|6525|smoothelin##AK095916|SMTN|6525|smoothelin##AK301289|SMTN|6525|smoothelin##AK307627|SMTN|6525|smoothelin##AK225648|SMTN|6525|smoothelin##Z49989|SMTN|6525|smoothelin##AK128627|SMTN|6525|smoothelin##AK295418|SMTN|6525|smoothelin##NM_001207018|SMTN|6525|smoothelin##BC013421|SELM|140606|selenoprotein M##BC030236|SELM|140606|selenoprotein M##BC042299|SELM|140606|selenoprotein M##BC068004|SELM|140606|selenoprotein M##NM_080430|SELM|140606|selenoprotein M##AK092859|INPP5J|27124|inositol polyphosphate-5-phosphatase J##AK293992|INPP5J|27124|inositol polyphosphate-5-phosphatase J##BC041652|INPP5J|27124|inositol polyphosphate-5-phosphatase J##NM_001002837|INPP5J|27124|inositol polyphosphate-5-phosphatase J##AK309548|INPP5J|27124|inositol polyphosphate-5-phosphatase J##AK095944|INPP5J|27124|inositol polyphosphate-5-phosphatase J##AK126610|INPP5J|27124|inositol polyphosphate-5-phosphatase J##BC109288|INPP5J|27124|inositol polyphosphate-5-phosphatase J##DQ892832|PLA2G3|50487|phospholipase A2, group III##DQ896078|PLA2G3|50487|phospholipase A2, group III##BC025316|PLA2G3|50487|phospholipase A2, group III##NM_015715|PLA2G3|50487|phospholipase A2, group III##AF220490|PLA2G3|50487|phospholipase A2, group III	0.135339	
chr4	186391969	186392146	reg1014314.p1	3.610	+	BC127739 BC141968 BC150574 NM_001114357	-41514	+	TSC_hg19_v1_chr4_-_186347130 AK002062 AK091635 NM_018359	-44968	-	AK303243 TSC_hg19_v1_chr4_+_186317996	-74077	+	BC038515 AK302815 AL833337 TSC_hg19_v1_chr4_-_186392907 AB080722 BC028419 BX641119 AK097605 NM_001145411 NM_152775	827	-	AK129863 BT007341 AB528880 CU674500 TSC_hg19_v1_chr4_-_186456662 AK222966 AF002280 AF002282 BC027870 AF039018 BC001017 AK313253 NM_001114107 NM_014476	64588	-	AK304653 TSC_hg19_v1_chr4_-_186577879 AK296461	185821	-	BC127739|C4orf47|441054|chromosome 4 open reading frame 47##BC141968|C4orf47|441054|chromosome 4 open reading frame 47##BC150574|C4orf47|441054|chromosome 4 open reading frame 47##NM_001114357|C4orf47|441054|chromosome 4 open reading frame 47##AK002062|UFSP2|55325|UFM1-specific peptidase 2##AK091635|UFSP2|55325|UFM1-specific peptidase 2##NM_018359|UFSP2|55325|UFM1-specific peptidase 2##AK303243|ANKRD37|353322|ankyrin repeat domain 37##BC038515|CCDC110|256309|coiled-coil domain containing 110##AK302815|CCDC110|256309|coiled-coil domain containing 110##AL833337|CCDC110|256309|coiled-coil domain containing 110##AB080722|CCDC110|256309|coiled-coil domain containing 110##BC028419|CCDC110|256309|coiled-coil domain containing 110##BX641119|CCDC110|256309|coiled-coil domain containing 110##AK097605|CCDC110|256309|coiled-coil domain containing 110##NM_001145411|CCDC110|256309|coiled-coil domain containing 110##NM_152775|CCDC110|256309|coiled-coil domain containing 110##AK129863|PDLIM3|27295|PDZ and LIM domain 3##BT007341|PDLIM3|27295|PDZ and LIM domain 3##AK222966|PDLIM3|27295|PDZ and LIM domain 3##AF002280|PDLIM3|27295|PDZ and LIM domain 3##AF002282|PDLIM3|27295|PDZ and LIM domain 3##BC027870|PDLIM3|27295|PDZ and LIM domain 3##AF039018|PDLIM3|27295|PDZ and LIM domain 3##BC001017|PDLIM3|27295|PDZ and LIM domain 3##AK313253|PDLIM3|27295|PDZ and LIM domain 3##NM_001114107|PDLIM3|27295|PDZ and LIM domain 3##NM_014476|PDLIM3|27295|PDZ and LIM domain 3##AK304653|SORBS2|8470|sorbin and SH3 domain containing 2##AK296461|SORBS2|8470|sorbin and SH3 domain containing 2	0.012808	
chr5	140940593	140940692	reg1036122.p1	3.610	+	AL050086 TSC_hg19_v1_chr5_-_140895550	-45160	-	TSC_hg19_v1_chr5_+_140868721 BC112081 BC112083 AF152339 AF152526 NM_018929 NM_032407	-71878	+	TSC_hg19_v1_chr5_+_140864626 BC042650 AF152338 AF152525 BC101035 BC101037 BC101038 NM_018928 NM_032406 BC101036	-75958	+	AF051782 AY363395 AB384958 DQ067453 TSC_hg19_v1_chr5_-_140998497 BC117257 BC143413 BC143414	57856	-	TSC_hg19_v1_chr5_-_140998562 AB209482	57919	-	TSC_hg19_v1_chr5_-_140998564 AK304291	57922	-	AL050086|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC112081|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC112083|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152339|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152526|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_018929|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_032407|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF051782|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AY363395|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##DQ067453|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC117257|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143413|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##BC143414|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AB209482|DIAPH1|1729|diaphanous homolog 1 (Drosophila)##AK304291|DIAPH1|1729|diaphanous homolog 1 (Drosophila)	0.0	
chr6	137093881	137094005	reg1039651.p1	3.610	+	NM_001198616 NM_001198617 NM_003980	-221987	-	TSC_hg19_v1_chr6_-_136871561 AJ242501 AJ242502 CU693064 AB384694 DQ890946 DQ896812 BC025777 AK312789 X73882	-222322	-	AK296483 AK311270 NM_001198614 NM_001198618 TSC_hg19_v1_chr6_-_136847745 AK311114 AK311236 AK316062 NM_001198619 AK311234	-246146	-	TSC_hg19_v1_chr6_-_137113169 AB384845	19287	-	TSC_hg19_v1_chr6_-_137113545 AK310942 D84476	19605	-	BC054503 TSC_hg19_v1_chr6_-_137113611	19667	-	NM_001198616|MAP7|9053|microtubule-associated protein 7##NM_001198617|MAP7|9053|microtubule-associated protein 7##NM_003980|MAP7|9053|microtubule-associated protein 7##AJ242501|MAP7|9053|microtubule-associated protein 7##AJ242502|MAP7|9053|microtubule-associated protein 7##DQ890946|MAP7|9053|microtubule-associated protein 7##DQ896812|MAP7|9053|microtubule-associated protein 7##BC025777|MAP7|9053|microtubule-associated protein 7##AK312789|MAP7|9053|microtubule-associated protein 7##X73882|MAP7|9053|microtubule-associated protein 7##AK296483|MAP7|9053|microtubule-associated protein 7##AK311270|MAP7|9053|microtubule-associated protein 7##NM_001198614|MAP7|9053|microtubule-associated protein 7##NM_001198618|MAP7|9053|microtubule-associated protein 7##AK311114|MAP7|9053|microtubule-associated protein 7##AK311236|MAP7|9053|microtubule-associated protein 7##AK316062|MAP7|9053|microtubule-associated protein 7##NM_001198619|MAP7|9053|microtubule-associated protein 7##AK311234|MAP7|9053|microtubule-associated protein 7##AK310942|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##D84476|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5##BC054503|MAP3K5|4217|mitogen-activated protein kinase kinase kinase 5	0.0	
chr6	35316288	35316468	reg1030694.p2	3.610	+	TSC_hg19_v1_chr6_+_35310402 AK304482 L07592	-5969	+	TSC_hg19_v1_chr6_+_35310375 AK304878 AB099507 AK296425 AK291661 BC002715 BC007578	-6002	+	TSC_hg19_v1_chr6_+_35310339 AK122614	-6039	+	TSC_hg19_v1_chr6_+_35420129 AK292522 BC046359 AF265210 NM_021922	103750	+	AK312617 TSC_hg19_v1_chr6_+_35420152	103777	+	NM_007104 TSC_hg19_v1_chr6_+_35436179 AK313181 AB055764 BC070216	119805	+	AK304482|PPARD|5467|peroxisome proliferator-activated receptor delta##L07592|PPARD|5467|peroxisome proliferator-activated receptor delta##AK304878|PPARD|5467|peroxisome proliferator-activated receptor delta##AB099507|PPARD|5467|peroxisome proliferator-activated receptor delta##AK296425|PPARD|5467|peroxisome proliferator-activated receptor delta##AK291661|PPARD|5467|peroxisome proliferator-activated receptor delta##BC002715|PPARD|5467|peroxisome proliferator-activated receptor delta##BC007578|PPARD|5467|peroxisome proliferator-activated receptor delta##AK122614|PPARD|5467|peroxisome proliferator-activated receptor delta##AK292522|FANCE|2178|Fanconi anemia, complementation group E##BC046359|FANCE|2178|Fanconi anemia, complementation group E##AF265210|FANCE|2178|Fanconi anemia, complementation group E##NM_021922|FANCE|2178|Fanconi anemia, complementation group E##AK312617|FANCE|2178|Fanconi anemia, complementation group E##NM_007104|RPL10A|4736|ribosomal protein L10a##AK313181|RPL10A|4736|ribosomal protein L10a##BC070216|RPL10A|4736|ribosomal protein L10a	0.0	
chr8	59222538	59222718	reg1035209.p2	3.610	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-315471	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1316202	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1316226	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	101257	+	X56088 M93133 BC101777 BC112184 NM_000780	190079	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	243124	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.0	
chrX	113952453	113952592	reg1034099.p2	3.610	+	NM_000868 U49516 BC028688 AK295753 TSC_hg19_v1_chrX_+_113818558 M81778	-133950	+	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	-1868460	-	AB384557 AY987378 NM_001113490	-1886169	-	X95302 AK308523 GQ494004 U70981 AK291957 NM_000640 Y08768 AK309444	299652	-	NM_001145346 AK301904	471453	+	AB587552 TSC_hg19_v1_chrX_-_114468623 BC125223 BC125224 BX647193 NM_001243963 NM_020871	516097	-	NM_000868|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##U49516|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##BC028688|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AK295753|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##M81778|HTR2C|3358|5-hydroxytryptamine (serotonin) receptor 2C##AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##X95302|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK308523|IL13RA2|3598|interleukin 13 receptor, alpha 2##GQ494004|IL13RA2|3598|interleukin 13 receptor, alpha 2##U70981|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK291957|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_000640|IL13RA2|3598|interleukin 13 receptor, alpha 2##Y08768|IL13RA2|3598|interleukin 13 receptor, alpha 2##AK309444|IL13RA2|3598|interleukin 13 receptor, alpha 2##NM_001145346|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##AK301904|RBMXL3|139804|RNA binding motif protein, X-linked-like 3##BC125223|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##BC125224|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##BX647193|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_001243963|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2##NM_020871|LRCH2|57631|leucine-rich repeats and calponin homology (CH) domain containing 2	0.999664	CTCF.p2:1:1.000
chr12	49295180	49295284	reg1035742.p2	3.609	+	AF498967 Y07923 AB464152 AB040147 AK292762 BC026356 NM_014470	-35632	-	AF026402 BC002366 TSC_hg19_v1_chr12_-_49245925 AK294877 AK312379 AK128428 AK292921 NM_004818	-49300	-	NM_000725 NM_001206915 TSC_hg19_v1_chr12_+_49212307	-82949	+	NM_033124 AK302082 AK093051 AX747886 AF382188 AK314623 BC039317	2690	+	NM_001143781	23431	-	DQ892057 DQ895251 AF238079 BC027973 AY358998 BC048292 AK301455 TSC_hg19_v1_chr12_-_49319304 NM_001143782 NM_016594	24038	-	AF498967|RND1|27289|Rho family GTPase 1##Y07923|RND1|27289|Rho family GTPase 1##AB040147|RND1|27289|Rho family GTPase 1##AK292762|RND1|27289|Rho family GTPase 1##BC026356|RND1|27289|Rho family GTPase 1##NM_014470|RND1|27289|Rho family GTPase 1##AF026402|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##BC002366|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK294877|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK312379|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK128428|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##AK292921|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##NM_004818|DDX23|9416|DEAD (Asp-Glu-Ala-Asp) box polypeptide 23##NM_000725|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_001206915|CACNB3|784|calcium channel, voltage-dependent, beta 3 subunit##NM_033124|CCDC65|85478|coiled-coil domain containing 65##AK302082|CCDC65|85478|coiled-coil domain containing 65##AK093051|CCDC65|85478|coiled-coil domain containing 65##AF382188|CCDC65|85478|coiled-coil domain containing 65##AK314623|CCDC65|85478|coiled-coil domain containing 65##BC039317|CCDC65|85478|coiled-coil domain containing 65##NM_001143781|FKBP11|51303|FK506 binding protein 11, 19 kDa##DQ892057|FKBP11|51303|FK506 binding protein 11, 19 kDa##DQ895251|FKBP11|51303|FK506 binding protein 11, 19 kDa##AF238079|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC027973|FKBP11|51303|FK506 binding protein 11, 19 kDa##AY358998|FKBP11|51303|FK506 binding protein 11, 19 kDa##BC048292|FKBP11|51303|FK506 binding protein 11, 19 kDa##AK301455|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_001143782|FKBP11|51303|FK506 binding protein 11, 19 kDa##NM_016594|FKBP11|51303|FK506 binding protein 11, 19 kDa	0.0	
chr13	30948663	30948813	reg1035815.p1	3.609	+	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-67169	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	-67587	-	TSC_hg19_v1_chr13_-_30424811 NM_007106	-523897	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	91255	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	91320	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	242889	-	AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##NM_007106|UBL3|5412|ubiquitin-like 3##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1	0.0	
chr19	3324427	3324504	reg1010054.p1	3.609	+	BC047522 DQ891648 DQ894837 TSC_hg19_v1_chr19_+_3224751 CU690430 AF329266	-99722	+	BC028101 NM_021938 AB209067 NM_001172673 TSC_hg19_v1_chr19_+_3224705	-99761	+	TSC_hg19_v1_chr19_+_3198814 BC008920	-125640	+	TSC_hg19_v1_chr19_+_3359531 NM_001245005 NM_205843 X12492 AK304816 AK289885	34991	+	TSC_hg19_v1_chr19_+_3366562 NM_001245002 NM_001245004 NM_005597 BC012120	42090	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	42115	+	BC047522|CELF5|60680|CUGBP, Elav-like family member 5##DQ891648|CELF5|60680|CUGBP, Elav-like family member 5##DQ894837|CELF5|60680|CUGBP, Elav-like family member 5##AF329266|CELF5|60680|CUGBP, Elav-like family member 5##BC028101|CELF5|60680|CUGBP, Elav-like family member 5##NM_021938|CELF5|60680|CUGBP, Elav-like family member 5##AB209067|CELF5|60680|CUGBP, Elav-like family member 5##NM_001172673|CELF5|60680|CUGBP, Elav-like family member 5##BC008920|NCLN|56926|nicalin##NM_001245005|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_205843|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X12492|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK304816|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK289885|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245002|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245004|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_005597|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC012120|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)	0.0	
chr20	35456388	35456454	reg1035842.p2	3.609	+	TSC_hg19_v1_chr20_-_35444558 AK131491	-11801	-	AK057056 TSC_hg19_v1_chr20_-_35407842	-48645	-	TSC_hg19_v1_chr20_-_35402167 BC035821 AK093031 AX747868 AK290738 NM_001145316 NM_024918 AK301671 AK301840 BC058899 AK023408 BC026011 NM_001145315 NM_001145317 NM_001145318	-54236	-	AK126630 NM_199181	31854	-	TSC_hg19_v1_chr20_-_35492072 NM_080627	35713	-	TSC_hg19_v1_chr20_+_35504544 BC127688 BC130646 BC130648 AK123544 NM_080628 HQ258755	48128	+	AK131491|KIAA0889|140710|KIAA0889##AK057056|KIAA0889|140710|KIAA0889##BC035821|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK093031|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK290738|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145316|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_024918|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301671|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301840|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC058899|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK023408|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC026011|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145315|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145317|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145318|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK126630|KIAA0889|140710|KIAA0889##NM_199181|KIAA0889|140710|KIAA0889##NM_080627|KIAA0889|140710|KIAA0889##BC127688|C20orf118|140711|chromosome 20 open reading frame 118##BC130646|C20orf118|140711|chromosome 20 open reading frame 118##BC130648|C20orf118|140711|chromosome 20 open reading frame 118##AK123544|C20orf118|140711|chromosome 20 open reading frame 118##NM_080628|C20orf118|140711|chromosome 20 open reading frame 118##HQ258755|C20orf118|140711|chromosome 20 open reading frame 118	0.0	
chr2	145276989	145277096	reg1031189.p4	3.609	+	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-1839	-	AB193095 AB193096 AB463360 TSC_hg19_v1_chr2_-_145274968	-2100	-	BX647773 TSC_hg19_v1_chr2_-_145090075 BX647436 NM_001164629	-186978	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	589	-	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	879	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	3325075	+	AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AB193095|ZEB2|9839|zinc finger E-box binding homeobox 2##AB193096|ZEB2|9839|zinc finger E-box binding homeobox 2##BX647773|GTDC1|79712|glycosyltransferase-like domain containing 1##BX647436|GTDC1|79712|glycosyltransferase-like domain containing 1##NM_001164629|GTDC1|79712|glycosyltransferase-like domain containing 1##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA	0.0	
chr2	148777728	148777815	reg1023487.p1	3.609	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	-175126	+	TSC_hg19_v1_chr2_+_148602300 AK314124	-175436	+	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	-175654	+	TSC_hg19_v1_chr2_-_148778310 AK225092 BC005388 AF022108 AF047598 AF132596 BC014847 AK295721 AK291989 AK294878 AK298862 NM_001190882 NM_001190879 AK299749 NM_002552 NM_001190881 NM_181741	591	-	TSC_hg19_v1_chr2_+_148778636 NM_018328 EF542797	838	+	NM_181742	1401	-	BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK225092|ORC4|5000|origin recognition complex, subunit 4##BC005388|ORC4|5000|origin recognition complex, subunit 4##AF022108|ORC4|5000|origin recognition complex, subunit 4##AF047598|ORC4|5000|origin recognition complex, subunit 4##AF132596|ORC4|5000|origin recognition complex, subunit 4##BC014847|ORC4|5000|origin recognition complex, subunit 4##AK295721|ORC4|5000|origin recognition complex, subunit 4##AK291989|ORC4|5000|origin recognition complex, subunit 4##AK294878|ORC4|5000|origin recognition complex, subunit 4##AK298862|ORC4|5000|origin recognition complex, subunit 4##NM_001190882|ORC4|5000|origin recognition complex, subunit 4##NM_001190879|ORC4|5000|origin recognition complex, subunit 4##AK299749|ORC4|5000|origin recognition complex, subunit 4##NM_002552|ORC4|5000|origin recognition complex, subunit 4##NM_001190881|ORC4|5000|origin recognition complex, subunit 4##NM_181741|ORC4|5000|origin recognition complex, subunit 4##NM_018328|MBD5|55777|methyl-CpG binding domain protein 5##EF542797|MBD5|55777|methyl-CpG binding domain protein 5##NM_181742|ORC4|5000|origin recognition complex, subunit 4	0.0	
chr3	133285979	133286079	reg1036970.p2	3.609	+	NM_003571 BC113518 BC113520 HQ258421 U48224	-167171	+	TSC_hg19_v1_chr3_+_132757234 AY358381 BC000568	-528795	+	NM_001136469 NM_023943 TSC_hg19_v1_chr3_+_132757202	-528842	+	TSC_hg19_v1_chr3_+_133292443 NM_001134422 NM_017548	6447	+	TSC_hg19_v1_chr3_+_133292588 AF103803	6543	+	TSC_hg19_v1_chr3_+_133292835 BC007338	6765	+	NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin##HQ258421|BFSP2|8419|beaded filament structural protein 2, phakinin##U48224|BFSP2|8419|beaded filament structural protein 2, phakinin##AY358381|TMEM108|66000|transmembrane protein 108##BC000568|TMEM108|66000|transmembrane protein 108##NM_001136469|TMEM108|66000|transmembrane protein 108##NM_023943|TMEM108|66000|transmembrane protein 108##NM_001134422|CDV3|55573|CDV3 homolog (mouse)##NM_017548|CDV3|55573|CDV3 homolog (mouse)##AF103803|CDV3|55573|CDV3 homolog (mouse)##BC007338|CDV3|55573|CDV3 homolog (mouse)	0.0	
chr4	191044192	191044258	reg1026667.p2	3.609	+	NM_033178 NM_001127386 NM_001127388 NM_001127389 NM_001164467 NM_001177376 NM_012147	-32328	+	NM_001127386 NM_001127388 NM_001127389 NM_001164467 NM_012147	-35625	+	NM_033178 NM_001127386 NM_001127388 NM_001127389 NM_001164467 NM_001177376 NM_012147	-38921	+	None	None	None	None	None	None	None	None	None	NM_033178|DUX4|22947|double homeobox 4##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_001177376|DUX4L4|441056|double homeobox 4 like 4##NM_012147|DUX2|26583|double homeobox 2##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_012147|DUX2|26583|double homeobox 2##NM_033178|DUX4|22947|double homeobox 4##NM_001127386|DUX4L2|728410|double homeobox 4 like 2##NM_001127388|DUX4L6|653544|double homeobox 4 like 6##NM_001127389|DUX4L5|653545|double homeobox 4 like 5##NM_001164467|DUX4L3|653548|double homeobox 4 like 3##NM_001177376|DUX4L4|441056|double homeobox 4 like 4##NM_012147|DUX2|26583|double homeobox 2	0.0	
chr6	73346245	73346379	reg1032661.p2	3.609	+	TSC_hg19_v1_chr6_+_73331998 AF202977 AF263835	-14251	+	AF249278 BC050689 BC117359 BC143554 BC143555 TSC_hg19_v1_chr6_+_73331968 AK299550	-14423	+	NM_001160130 NM_001160132 NM_001160133 NM_001160134 NM_019842	-14742	+	BC004267 NM_001126063	588862	-	TSC_hg19_v1_chr6_-_73972815 BC022080 NM_030568 AK054891	626554	-	TSC_hg19_v1_chr6_+_73972992 BC031876 AK094485	626661	+	AF202977|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF263835|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AF249278|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC050689|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC117359|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143554|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC143555|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##AK299550|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160130|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160132|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160133|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_001160134|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##NM_019842|KCNQ5|56479|potassium voltage-gated channel, KQT-like subfamily, member 5##BC004267|KHDC1L|100129128|KH homology domain containing 1-like##NM_001126063|KHDC1L|100129128|KH homology domain containing 1-like##BC022080|KHDC1|80759|KH homology domain containing 1##NM_030568|KHDC1|80759|KH homology domain containing 1	0.0	
chr8	76638537	76638630	reg1036322.p1	3.609	+	BX571750 NM_004133 EU832451 HQ692842	-186369	+	TSC_hg19_v1_chr8_+_76320132 BC054009 Z49826	-318395	+	NM_031461 TSC_hg19_v1_chr8_+_75896739 AY358564 BC020514 AK314048 AL834301 AF142573	-741674	+	TSC_hg19_v1_chr8_+_77593510 AK131408 NM_024721	954927	+	AB083343 TSC_hg19_v1_chr8_+_77593533	954945	+	AK131399 TSC_hg19_v1_chr8_+_77765961	1127306	+	BX571750|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_004133|HNF4G|3174|hepatocyte nuclear factor 4, gamma##EU832451|HNF4G|3174|hepatocyte nuclear factor 4, gamma##HQ692842|HNF4G|3174|hepatocyte nuclear factor 4, gamma##BC054009|HNF4G|3174|hepatocyte nuclear factor 4, gamma##Z49826|HNF4G|3174|hepatocyte nuclear factor 4, gamma##NM_031461|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AY358564|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##BC020514|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK314048|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AL834301|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AF142573|CRISPLD1|83690|cysteine-rich secretory protein LCCL domain containing 1##AK131408|ZFHX4|79776|zinc finger homeobox 4##NM_024721|ZFHX4|79776|zinc finger homeobox 4##AB083343|ZFHX4|79776|zinc finger homeobox 4##AK131399|ZFHX4|79776|zinc finger homeobox 4	0.93151	CTCF.p2:12:0.932
chr1	154909003	154909184	reg1039134.p1	3.608	+	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	-66347	-	BX649146 TSC_hg19_v1_chr1_-_154840541	-68592	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	-76831	-	BT019976 CR541998 TSC_hg19_v1_chr1_-_154909187 L77213	81	-	TSC_hg19_v1_chr1_-_154909401 BC007694 BC000237 AK130234 AK312803 BC006089 NM_006556	340	-	TSC_hg19_v1_chr1_-_154928571 BC016852 NM_020524 AF221521 AK023219 AK303413 AK303863 AK300987	19486	-	AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BT019976|PMVK|10654|phosphomevalonate kinase##CR541998|PMVK|10654|phosphomevalonate kinase##L77213|PMVK|10654|phosphomevalonate kinase##BC007694|PMVK|10654|phosphomevalonate kinase##AK130234|PMVK|10654|phosphomevalonate kinase##AK312803|PMVK|10654|phosphomevalonate kinase##BC006089|PMVK|10654|phosphomevalonate kinase##NM_006556|PMVK|10654|phosphomevalonate kinase##BC016852|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##NM_020524|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AF221521|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK023219|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303413|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK303863|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1##AK300987|PBXIP1|57326|pre-B-cell leukemia homeobox interacting protein 1	0.0	
chr1	25357225	25357399	reg1029006.p1	3.608	+	BC013362 AK310945 NM_001031680 AF022726	-65770	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-100526	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-100573	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	201675	-	BC065040 TSC_hg19_v1_chr1_-_25573922	216611	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	216661	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr15	74265586	74265699	reg1002114.p2	3.608	+	TSC_hg19_v1_chr15_+_74218979 DQ893331	-46601	+	TSC_hg19_v1_chr15_+_74218813 BC015090 L21186	-46827	+	TSC_hg19_v1_chr15_+_74218802 BC068542 AK303982 AK314222	-46841	+	AL109664 AF074953 AL109665 CR542089 DQ064605 AB587381 AK300799 AK222665 AK075244 Y16522 BC034379 BC065249 NM_004809 AF111800 AK302051 TSC_hg19_v1_chr15_-_74284672 AF156557	18961	-	TSC_hg19_v1_chr15_-_74286928 AK091531	21292	-	TSC_hg19_v1_chr15_+_74287096 NM_002675 NM_033238 NM_033239 NM_033240 NM_033244 NM_033246 NM_033247 NM_033249 NM_033250 X63131 AB209411 S50913 M73778 AF230401 AF230402 AF230403 AF230404 AF230405 AF230406 AF230407 AF230408 AF230409 AF230410 AF230411 BC000080 BC020994	21408	+	DQ893331|LOXL1|4016|lysyl oxidase-like 1##BC015090|LOXL1|4016|lysyl oxidase-like 1##L21186|LOXL1|4016|lysyl oxidase-like 1##BC068542|LOXL1|4016|lysyl oxidase-like 1##AK303982|LOXL1|4016|lysyl oxidase-like 1##AK314222|LOXL1|4016|lysyl oxidase-like 1##AL109664|STOML1|9399|stomatin (EPB72)-like 1##AF074953|STOML1|9399|stomatin (EPB72)-like 1##AL109665|STOML1|9399|stomatin (EPB72)-like 1##CR542089|STOML1|9399|stomatin (EPB72)-like 1##DQ064605|STOML1|9399|stomatin (EPB72)-like 1##AK300799|STOML1|9399|stomatin (EPB72)-like 1##AK222665|STOML1|9399|stomatin (EPB72)-like 1##AK075244|STOML1|9399|stomatin (EPB72)-like 1##Y16522|STOML1|9399|stomatin (EPB72)-like 1##BC034379|STOML1|9399|stomatin (EPB72)-like 1##BC065249|STOML1|9399|stomatin (EPB72)-like 1##NM_004809|STOML1|9399|stomatin (EPB72)-like 1##AF111800|STOML1|9399|stomatin (EPB72)-like 1##AK302051|STOML1|9399|stomatin (EPB72)-like 1##AF156557|STOML1|9399|stomatin (EPB72)-like 1##AK091531|STOML1|9399|stomatin (EPB72)-like 1##NM_002675|PML|5371|promyelocytic leukemia##NM_033238|PML|5371|promyelocytic leukemia##NM_033239|PML|5371|promyelocytic leukemia##NM_033240|PML|5371|promyelocytic leukemia##NM_033244|PML|5371|promyelocytic leukemia##NM_033246|PML|5371|promyelocytic leukemia##NM_033247|PML|5371|promyelocytic leukemia##NM_033249|PML|5371|promyelocytic leukemia##NM_033250|PML|5371|promyelocytic leukemia##X63131|PML|5371|promyelocytic leukemia##AB209411|PML|5371|promyelocytic leukemia##S50913|PML|5371|promyelocytic leukemia##M73778|PML|5371|promyelocytic leukemia##AF230401|PML|5371|promyelocytic leukemia##AF230402|PML|5371|promyelocytic leukemia##AF230403|PML|5371|promyelocytic leukemia##AF230404|PML|5371|promyelocytic leukemia##AF230405|PML|5371|promyelocytic leukemia##AF230406|PML|5371|promyelocytic leukemia##AF230407|PML|5371|promyelocytic leukemia##AF230408|PML|5371|promyelocytic leukemia##AF230409|PML|5371|promyelocytic leukemia##AF230410|PML|5371|promyelocytic leukemia##AF230411|PML|5371|promyelocytic leukemia##BC000080|PML|5371|promyelocytic leukemia##BC020994|PML|5371|promyelocytic leukemia	0.0	
chr16	10350968	10351135	reg1003798.p2	3.608	+	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	-74374	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	-74863	-	BC143273 U09002 NM_001134408	-75218	-	AK093414 AX748112 TSC_hg19_v1_chr16_+_10479917 AK296565 AK299040 BC033891 BC041882	128866	+	NM_024997 BC137079 BC144468	171689	+	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	323439	-	NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2	0.0	
chr19	40042313	40042494	reg1006464.p2	3.608	+	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	-11583	-	TSC_hg19_v1_chr19_-_40023460 BC040157 BC051333 AK096263 NM_152361 BC009725	-18916	-	AY324825 NM_182704 BC117331	-36634	+	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	50782	+	FJ613352 NM_001190441	104142	+	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	152640	+	AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC040157|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##BC051333|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##AK096263|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##NM_152361|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##BC009725|EID2B|126272|EP300 interacting inhibitor of differentiation 2B##AY324825|SELV|348303|selenoprotein V##NM_182704|SELV|348303|selenoprotein V##BC117331|SELV|348303|selenoprotein V##BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14	0.0	
chr19	41767966	41768147	reg1005376.p1	3.608	+	TSC_hg19_v1_chr19_+_41725293 AK310881 AB385214 DQ894117	-42768	+	TSC_hg19_v1_chr19_+_41725261 S65125 X57019	-42795	+	TSC_hg19_v1_chr19_+_41725146 M76125	-42910	+	TSC_hg19_v1_chr19_+_41768461 NM_144732 AK225850 AK023006 AK308078	411	+	TSC_hg19_v1_chr19_+_41770226 NM_007040 AJ007509	2093	+	TSC_hg19_v1_chr19_+_41770281 AK022863 AK127057 AK291762 AK308156	2221	+	AK310881|AXL|558|AXL receptor tyrosine kinase##DQ894117|AXL|558|AXL receptor tyrosine kinase##S65125|AXL|558|AXL receptor tyrosine kinase##X57019|AXL|558|AXL receptor tyrosine kinase##M76125|AXL|558|AXL receptor tyrosine kinase##NM_144732|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK225850|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK023006|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK308078|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##NM_007040|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AJ007509|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK022863|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK127057|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK291762|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##AK308156|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1	0.0	
chr22	42318368	42318549	reg1041365.p2	3.608	+	NM_001207020	-7788	-	TSC_hg19_v1_chr22_+_42229269 CU013184 CU013472 AB463291	-89187	+	TSC_hg19_v1_chr22_+_42229253 BC056158 U02031 BC051385 CT841522 AK299914	-89257	+	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	4341	-	EU035297 NM_001110215	17764	-	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	24665	-	NM_001207020|SHISA8|440829|shisa homolog 8 (Xenopus laevis)##CU013184|SREBF2|6721|sterol regulatory element binding transcription factor 2##CU013472|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC056158|SREBF2|6721|sterol regulatory element binding transcription factor 2##U02031|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051385|SREBF2|6721|sterol regulatory element binding transcription factor 2##CT841522|SREBF2|6721|sterol regulatory element binding transcription factor 2##AK299914|SREBF2|6721|sterol regulatory element binding transcription factor 2##AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M	0.0	
chr3	150784957	150785109	reg1031899.p1	3.608	+	AF482697 NM_001195794 NM_174878	-94248	-	AF388366 AF388368 NM_052995	-123011	-	TSC_hg19_v1_chr3_-_150481278 U76248 NM_005067	-303911	-	TSC_hg19_v1_chr3_+_150803504 AK128165	18472	+	AF399708 NM_053002 BC144559	19644	+	AF002986 BC036815 NM_013308	135933	-	AF482697|CLRN1|7401|clarin 1##NM_001195794|CLRN1|7401|clarin 1##NM_174878|CLRN1|7401|clarin 1##AF388366|CLRN1|7401|clarin 1##AF388368|CLRN1|7401|clarin 1##NM_052995|CLRN1|7401|clarin 1##U76248|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##NM_005067|SIAH2|6478|seven in absentia homolog 2 (Drosophila)##AK128165|MED12L|116931|mediator complex subunit 12-like##AF399708|MED12L|116931|mediator complex subunit 12-like##NM_053002|MED12L|116931|mediator complex subunit 12-like##BC144559|MED12L|116931|mediator complex subunit 12-like##AF002986|GPR171|29909|G protein-coupled receptor 171##BC036815|GPR171|29909|G protein-coupled receptor 171##NM_013308|GPR171|29909|G protein-coupled receptor 171	0.992616	CTCF.p2:0:0.993
chr3	153503862	153503956	reg1038851.p1	3.608	+	AF086445 NM_001101337	-301626	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-623861	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-623883	+	AK127282 NM_001251962	334882	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	335293	+	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	538351	-	AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36	0.0	
chr5	133404371	133404551	reg1036120.p2	3.608	+	AK095989 NM_003374	-63638	-	TSC_hg19_v1_chr5_-_133340431 L06132	-64031	-	TSC_hg19_v1_chr5_-_133340397 BC071168 AK293639	-64060	-	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	46058	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	46900	+	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	108162	-	AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##L06132|VDAC1|7416|voltage-dependent anion channel 1##BC071168|VDAC1|7416|voltage-dependent anion channel 1##AK293639|VDAC1|7416|voltage-dependent anion channel 1##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1	0.0	
chr5	159889312	159889383	reg1046564.p1	3.608	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-40444	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-40493	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-43242	-	AK025130 TSC_hg19_v1_chr5_-_160112393	222992	-	AB018258 AK295081 AK090832 AX746642 NM_025153	389784	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	1085779	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.0	
chr6	139961760	139961858	reg1041471.p1	3.608	+	NM_006079 TSC_hg19_v1_chr6_-_139695784	-266025	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	-266048	-	NM_001168389 NM_001168388	-266386	-	BC095542 GU727635 M73482 NM_002511	2448055	-	TSC_hg19_v1_chr6_+_142468399 AF151062 AK301376 BC006989 BC022536	2506581	+	TSC_hg19_v1_chr6_+_142468406 AL136684 AK130738 AF060225 AF271994 AK000051 NM_016485	2506597	+	NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC095542|NMBR|4829|neuromedin B receptor##GU727635|NMBR|4829|neuromedin B receptor##M73482|NMBR|4829|neuromedin B receptor##NM_002511|NMBR|4829|neuromedin B receptor##AF151062|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK301376|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC006989|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##BC022536|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AL136684|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK130738|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF060225|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AF271994|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##AK000051|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)##NM_016485|VTA1|51534|Vps20-associated 1 homolog (S. cerevisiae)	0.0	
chrX	47479394	47479574	reg1026517.p2	3.608	+	TSC_hg19_v1_chrX_-_47479257 BC048799 NM_006950 NM_133499	-214	-	TSC_hg19_v1_chrX_-_47479098 AB591026	-372	-	TSC_hg19_v1_chrX_+_47441834 X03124 M12670 AK310206 AK311937 AK307222 M59906 X02598	-37661	+	AB590250 CU677429 DQ893460 DQ896310 TSC_hg19_v1_chrX_-_47489295 AK122955 BC015756 X57748 M83652 AK310695 NM_001145252	9821	-	NM_002621	10219	-	BC048296 AB016193 TSC_hg19_v1_chrX_-_47509984 AK312984 AF000672 M25269	30443	-	BC048799|SYN1|6853|synapsin I##NM_006950|SYN1|6853|synapsin I##NM_133499|SYN1|6853|synapsin I##X03124|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M12670|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK310206|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK311937|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M59906|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X02598|TIMP1|7076|TIMP metallopeptidase inhibitor 1##DQ893460|CFP|5199|complement factor properdin##DQ896310|CFP|5199|complement factor properdin##AK122955|CFP|5199|complement factor properdin##BC015756|CFP|5199|complement factor properdin##X57748|CFP|5199|complement factor properdin##M83652|CFP|5199|complement factor properdin##AK310695|CFP|5199|complement factor properdin##NM_001145252|CFP|5199|complement factor properdin##NM_002621|CFP|5199|complement factor properdin##BC048296|ELK1|2002|ELK1, member of ETS oncogene family##AB016193|ELK1|2002|ELK1, member of ETS oncogene family##AK312984|ELK1|2002|ELK1, member of ETS oncogene family##AF000672|ELK1|2002|ELK1, member of ETS oncogene family##M25269|ELK1|2002|ELK1, member of ETS oncogene family	0.0	
chr10	64539190	64539292	reg1030671.p1	3.607	+	AJ505150 NM_199452	-259035	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-405198	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-510702	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	25301	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	25416	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	36856	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.0	
chr12	105682525	105682622	reg1034947.p1	3.607	+	CU689714 AB527678 DQ892107 DQ895301 TSC_hg19_v1_chr12_-_105629989 AK001521 AK290562 AK297100 BC033731 BC028008 AY113704 NM_001251904 NM_018171	-52663	-	NM_001251905	-55391	-	TSC_hg19_v1_chr12_+_105501556 AB385420	-181006	+	TSC_hg19_v1_chr12_+_105724468 BC013920 NM_001145199 BC067897 BC045812 BC061920 AK056999 AJ311377	41898	+	AJ311378 TSC_hg19_v1_chr12_+_105724640	42066	+	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	850109	-	DQ892107|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##DQ895301|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK001521|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK290562|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AK297100|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC033731|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC028008|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##AY113704|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251904|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_018171|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##NM_001251905|APPL2|55198|adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2##BC013920|C12orf75|387882|chromosome 12 open reading frame 75##NM_001145199|C12orf75|387882|chromosome 12 open reading frame 75##BC067897|C12orf75|387882|chromosome 12 open reading frame 75##BC045812|C12orf75|387882|chromosome 12 open reading frame 75##BC061920|C12orf75|387882|chromosome 12 open reading frame 75##AK056999|C12orf75|387882|chromosome 12 open reading frame 75##AJ311377|C12orf75|387882|chromosome 12 open reading frame 75##AJ311378|C12orf75|387882|chromosome 12 open reading frame 75##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1	0.678965	CTCF.p2:-1:0.679
chr13	33927385	33927453	reg1034597.p1	3.607	+	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	-2651	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	-67552	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-147255	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	323516	-	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	464808	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	464865	+	AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa	0.0	
chr14	77467138	77467309	reg1035593.p2	3.607	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-174428	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-187961	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-188013	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	27461	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	27837	-	AK124327 TSC_hg19_v1_chr14_-_77542533	75310	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.0	
chr15	101665049	101665115	reg1039079.p1	3.607	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-205570	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-205608	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-245011	+	AB071402 TSC_hg19_v1_chr15_-_101791795	126654	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	127053	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	152581	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.0	
chr16	11763677	11763761	reg1035424.p2	3.607	+	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	-1421	+	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	-82930	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	-83532	-	TSC_hg19_v1_chr16_-_11836686 AK297094 BX648407 AK027646 NM_015914 BC002856 BC018635	72937	-	BC046363 BC036857 TSC_hg19_v1_chr16_-_11891096 AK091803 AX747194	127332	-	TSC_hg19_v1_chr16_-_11891103 NM_014153	127396	-	NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##AK297094|TXNDC11|51061|thioredoxin domain containing 11##BX648407|TXNDC11|51061|thioredoxin domain containing 11##AK027646|TXNDC11|51061|thioredoxin domain containing 11##NM_015914|TXNDC11|51061|thioredoxin domain containing 11##BC002856|TXNDC11|51061|thioredoxin domain containing 11##BC018635|TXNDC11|51061|thioredoxin domain containing 11##BC046363|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC036857|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK091803|ZC3H7A|29066|zinc finger CCCH-type containing 7A##NM_014153|ZC3H7A|29066|zinc finger CCCH-type containing 7A	0.0	
chr16	11945187	11945314	reg1031654.p1	3.607	+	TSC_hg19_v1_chr16_-_11891103 NM_014153	-54135	-	BC046363 BC036857 TSC_hg19_v1_chr16_-_11891096 AK091803 AX747194	-54199	-	TSC_hg19_v1_chr16_-_11836686 AK297094 BX648407 AK027646 NM_015914 BC002856 BC018635	-108594	-	AY598331 HQ258262 HQ258426 AJ007398 BC019069 TSC_hg19_v1_chr16_-_11945392 AK000822 BC009802 BC017899 BC107782 BC070325 AY154473 BC112228 BC113699 BC016362 AL049999 AK295935 NM_015659	154	-	TSC_hg19_v1_chr16_-_12009569 AB590486	64353	-	BC009503 TSC_hg19_v1_chr16_-_12009763 AK095483	64498	-	NM_014153|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC046363|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC036857|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK091803|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK297094|TXNDC11|51061|thioredoxin domain containing 11##BX648407|TXNDC11|51061|thioredoxin domain containing 11##AK027646|TXNDC11|51061|thioredoxin domain containing 11##NM_015914|TXNDC11|51061|thioredoxin domain containing 11##BC002856|TXNDC11|51061|thioredoxin domain containing 11##BC018635|TXNDC11|51061|thioredoxin domain containing 11##AY598331|RSL1D1|26156|ribosomal L1 domain containing 1##HQ258262|RSL1D1|26156|ribosomal L1 domain containing 1##HQ258426|RSL1D1|26156|ribosomal L1 domain containing 1##AJ007398|RSL1D1|26156|ribosomal L1 domain containing 1##BC019069|RSL1D1|26156|ribosomal L1 domain containing 1##AK000822|RSL1D1|26156|ribosomal L1 domain containing 1##BC009802|RSL1D1|26156|ribosomal L1 domain containing 1##BC017899|RSL1D1|26156|ribosomal L1 domain containing 1##BC107782|RSL1D1|26156|ribosomal L1 domain containing 1##BC070325|RSL1D1|26156|ribosomal L1 domain containing 1##AY154473|RSL1D1|26156|ribosomal L1 domain containing 1##BC112228|RSL1D1|26156|ribosomal L1 domain containing 1##BC113699|RSL1D1|26156|ribosomal L1 domain containing 1##BC016362|RSL1D1|26156|ribosomal L1 domain containing 1##AL049999|RSL1D1|26156|ribosomal L1 domain containing 1##AK295935|RSL1D1|26156|ribosomal L1 domain containing 1##NM_015659|RSL1D1|26156|ribosomal L1 domain containing 1##BC009503|GSPT1|2935|G1 to S phase transition 1##AK095483|GSPT1|2935|G1 to S phase transition 1	0.0	
chr16	17471740	17471852	reg1033437.p1	3.607	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-1145266	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1145308	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-1145314	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	93009	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1101595	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1326300	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr16	67595831	67595903	reg1023635.p1	3.607	+	BC041086 AK023787 TSC_hg19_v1_chr16_+_67573861 BC098587	-22003	+	AK097087 TSC_hg19_v1_chr16_+_67572105	-23823	+	TSC_hg19_v1_chr16_+_67571364 NM_001193524 BC021284 AK295677	-24480	+	AK314804 NM_001191022 NM_006565 TSC_hg19_v1_chr16_+_67596455 U25435 AB209793 BC014267	527	+	TSC_hg19_v1_chr16_+_67679038 AB113647 NM_001013838	83159	+	TSC_hg19_v1_chr16_+_67679059 FJ026014 AL832446	83250	+	BC041086|FAM65A|79567|family with sequence similarity 65, member A##AK023787|FAM65A|79567|family with sequence similarity 65, member A##BC098587|FAM65A|79567|family with sequence similarity 65, member A##AK097087|FAM65A|79567|family with sequence similarity 65, member A##NM_001193524|FAM65A|79567|family with sequence similarity 65, member A##AK295677|FAM65A|79567|family with sequence similarity 65, member A##AK314804|CTCF|10664|CCCTC-binding factor (zinc finger protein)##NM_001191022|CTCF|10664|CCCTC-binding factor (zinc finger protein)##NM_006565|CTCF|10664|CCCTC-binding factor (zinc finger protein)##U25435|CTCF|10664|CCCTC-binding factor (zinc finger protein)##AB209793|CTCF|10664|CCCTC-binding factor (zinc finger protein)##BC014267|CTCF|10664|CCCTC-binding factor (zinc finger protein)##AB113647|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##NM_001013838|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##FJ026014|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing##AL832446|RLTPR|146206|RGD motif, leucine rich repeats, tropomodulin domain and proline-rich containing	0.0	
chr17	76408597	76408669	reg1037811.p2	3.607	+	TSC_hg19_v1_chr17_+_76374729 AK316147 AK307874 AK296882 AK024529 AK225030 AK316405 BC108732 NM_024419 BC035662 AK297156 BC008903 BC015570 BC025951	-33903	+	TSC_hg19_v1_chr17_-_76356159 AK309756 AK314212 BC060858 NM_003955	-52476	-	BC042066 NM_001204210 NM_001204211 NM_001204212 BC148207	-181170	+	NM_173628	164842	-	AK316277 TSC_hg19_v1_chr17_-_76719649	311014	-	TSC_hg19_v1_chr17_-_76719676 AK293894	311118	-	AK316147|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK307874|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK296882|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK024529|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK225030|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK316405|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC108732|PGS1|9489|phosphatidylglycerophosphate synthase 1##NM_024419|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC035662|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK297156|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC008903|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC015570|PGS1|9489|phosphatidylglycerophosphate synthase 1##BC025951|PGS1|9489|phosphatidylglycerophosphate synthase 1##AK309756|SOCS3|9021|suppressor of cytokine signaling 3##AK314212|SOCS3|9021|suppressor of cytokine signaling 3##BC060858|SOCS3|9021|suppressor of cytokine signaling 3##NM_003955|SOCS3|9021|suppressor of cytokine signaling 3##BC042066|TMEM235|283999|transmembrane protein 235##NM_001204210|TMEM235|283999|transmembrane protein 235##NM_001204211|TMEM235|283999|transmembrane protein 235##NM_001204212|TMEM235|283999|transmembrane protein 235##BC148207|TMEM235|283999|transmembrane protein 235##NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17##AK316277|CYTH1|9267|cytohesin 1##AK293894|CYTH1|9267|cytohesin 1	0.191749	
chr1	92864726	92864849	reg1040069.p2	3.607	+	BC039014 NM_024813 TSC_hg19_v1_chr1_+_92764615 AK023212 BC031070 AK225054 CU691638	-100212	+	TSC_hg19_v1_chr1_-_92764545 AJ302735 AJ347709 BC001257 AK295971 U73704 NM_053274	-100254	-	NM_001012425 BC130499 BC171742	-181212	+	AB463058 DQ891273 DQ894461 AB209606 BC074866 BC074867 TSC_hg19_v1_chr1_-_92949213	84342	-	AK313876 NM_001127215 TSC_hg19_v1_chr1_-_92949370	84592	-	TSC_hg19_v1_chr1_-_92949508 AK123009	84745	-	BC039014|RPAP2|79871|RNA polymerase II associated protein 2##NM_024813|RPAP2|79871|RNA polymerase II associated protein 2##AK023212|RPAP2|79871|RNA polymerase II associated protein 2##BC031070|RPAP2|79871|RNA polymerase II associated protein 2##AK225054|RPAP2|79871|RNA polymerase II associated protein 2##AJ302735|GLMN|11146|glomulin, FKBP associated protein##AJ347709|GLMN|11146|glomulin, FKBP associated protein##BC001257|GLMN|11146|glomulin, FKBP associated protein##AK295971|GLMN|11146|glomulin, FKBP associated protein##U73704|GLMN|11146|glomulin, FKBP associated protein##NM_053274|GLMN|11146|glomulin, FKBP associated protein##NM_001012425|C1orf146|388649|chromosome 1 open reading frame 146##BC130499|C1orf146|388649|chromosome 1 open reading frame 146##BC171742|C1orf146|388649|chromosome 1 open reading frame 146##DQ891273|GFI1|2672|growth factor independent 1 transcription repressor##DQ894461|GFI1|2672|growth factor independent 1 transcription repressor##AB209606|GFI1|2672|growth factor independent 1 transcription repressor##BC074866|GFI1|2672|growth factor independent 1 transcription repressor##BC074867|GFI1|2672|growth factor independent 1 transcription repressor##AK313876|GFI1|2672|growth factor independent 1 transcription repressor##NM_001127215|GFI1|2672|growth factor independent 1 transcription repressor##AK123009|GFI1|2672|growth factor independent 1 transcription repressor	0.0	
chr1_gl000192_random	544963	545074	reg1041124.p1	3.607	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr21	47879838	47879941	reg1045425.p2	3.607	+	AK056738 TSC_hg19_v1_chr21_+_47878972 AB273729	-893	+	TSC_hg19_v1_chr21_+_47878854 AK303351 NM_001146114 NM_001146115 NM_001146116 NM_015151 NM_206889 NM_206890 NM_206891 BC038443 BC033718 AF490768	-1027	+	TSC_hg19_v1_chr21_-_47878602 AK127572	-1288	-	BC001766 TSC_hg19_v1_chr21_-_48024996 BC041935 CS301701 CS301702 NM_006272	145120	-	TSC_hg19_v1_chr21_+_48055078 AK123650	175188	+	NM_001242864 NM_001242865 NM_001242866 NM_001535 NM_206962 TSC_hg19_v1_chr21_+_48055572 AK123352 AY786414 FJ436410 FJ436411 FJ436412 U79286 X99209 U80213 AK312573 AL833586	175654	+	AK056738|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AB273729|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AK303351|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146114|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146115|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146116|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_015151|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206889|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206890|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206891|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##BC038443|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##BC033718|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AF490768|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##BC001766|S100B|6285|S100 calcium binding protein B##BC041935|S100B|6285|S100 calcium binding protein B##NM_006272|S100B|6285|S100 calcium binding protein B##AK123650|PRMT2|3275|protein arginine methyltransferase 2##NM_001242864|PRMT2|3275|protein arginine methyltransferase 2##NM_001242865|PRMT2|3275|protein arginine methyltransferase 2##NM_001242866|PRMT2|3275|protein arginine methyltransferase 2##NM_001535|PRMT2|3275|protein arginine methyltransferase 2##NM_206962|PRMT2|3275|protein arginine methyltransferase 2##AK123352|PRMT2|3275|protein arginine methyltransferase 2##AY786414|PRMT2|3275|protein arginine methyltransferase 2##FJ436410|PRMT2|3275|protein arginine methyltransferase 2##FJ436411|PRMT2|3275|protein arginine methyltransferase 2##FJ436412|PRMT2|3275|protein arginine methyltransferase 2##U79286|PRMT2|3275|protein arginine methyltransferase 2##X99209|PRMT2|3275|protein arginine methyltransferase 2##U80213|PRMT2|3275|protein arginine methyltransferase 2##AK312573|PRMT2|3275|protein arginine methyltransferase 2##AL833586|PRMT2|3275|protein arginine methyltransferase 2	0.0	
chr2	89459927	89460032	reg1036507.p1	3.607	+	EU202447 EU202449 L32748 AY957511 U43771 X72469 Z68927 Z11891 S72730 X72437 M74022 X72435 X72470 AF381166 AJ009733 AJ131061 AJ224084 L38430 M27025 M63438 M88499 S46248 U44794 U79586 U79587 X06763 X06764 Z11903 Z46345 Z68950 Z68988 Z68941 Z68931 Z68933 Z68937 Z68947 Z69020 BC073793 X58081 BC032451 Z11895 Z27170 Z11890 BC092453 TSC_hg19_v1_chr2_-_89442626 AK129807 BC016380 BC062704 AK128524 Z11894	-17390	-	AY894991 CU691142 Z69026 TSC_hg19_v1_chr2_-_89292427 BC056256	-167566	-	TSC_hg19_v1_chr2_+_89185057 BC017870 X02990 M38267 AJ004955 S50732 L33854 AJ004956 BC018761 AY204756 M29467 Z46347 Z27174 X72457 AY621626 EU202450 X72474 Z68966 X72492 AF490937	-274889	+	DQ101062 HM996121 HM996465 HM996476 HM996026 HM996187 HM996131 EF624161 HM996555 JN111256 JN111879 Y17950 AF103476 JN111218 JN111230 JN111231 JN111245 JN111249 JN111250 JN111252 JN111281 JN111301 JN111303 JN111306 JN111309 JN111331 JN111338 JN111340 JN111342 JN111344 JN111350 JN111351 JN111353 JN111360 JN111365 JN111371 JN111388 JN111402 JN111427 JN111431 JN111464 JN111508 JN111546 JN111553 JN111572 JN111585 JN111586 JN111598 JN111615 JN111630 JN111631 JN111723 JN111731 JN111737 JN111739 JN111742 JN111753 JN111762 JN111767 JN111772 JN111778 JN111781 JN111801 JN111814 JN111819 JN111836 JN111844 JN111845 JN111856 JN111862 JN111865 JN111872 JN111878 JN111881 JN111883 JN111941 AF103416 AF032361 AF103536 AY867120 AF044463 AM259150 JF894279 L03152 L03156 L08900 L09083 L09085 X98976 AF103489 AB363246 AY866984 AY867018 AY867100 AY867106 AF103486 AY866999 AY867013 AY867050 AY867070 AY867075 AY867119 AY867122 AY867160 AY867174 AY867199 DQ100653 DQ101018 DQ101106 AF103771 AF103772 AY180390 U86793 AB063945 AB063955 AF035044 AF193852 AM040570 AM181149 AM181298 AM184032 AM184035 AM184055 AY043092 AY043139 AY043160 AY554182 AY866997 AY867020 AY867024 AY867033 AY867069 AY867072 AY867081 AY867109 AY867111 AY867129 AY867134 AY867143 AY867209 AY867239 AY942101 DQ101015 DQ101172 DQ187725 DQ205157 DQ322878 DQ840959 EF589385 EU599328 FJ039796 FJ385447 HQ378440 HQ689760 HQ689785 L37307 U86803 Z18827 Y14869 X72440 AF490917 X72476 L26890 X72462 AY510106 TSC_hg19_v1_chr2_-_89513410 BC070336	53254	-	Z27171 L06158 AF490907 X72480 AF490924 X72424 X72441 X72477 U44792 X72427 AJ548508 L01279 L38434 M74019 M87478 S67637 U43765 U43766 U43770 U43773 U66190 X85996 X85997 Y14736 AJ010446 BC073775 AF417853 TSC_hg19_v1_chr2_-_89619885 BC070334	159874	-	TSC_hg19_v1_chr2_+_90077732 AJ131061	617775	+	BC073793|IGKC|3514|immunoglobulin kappa constant##BC032451|IGK@|50802|immunoglobulin kappa locus##BC092453|IGKC|3514|immunoglobulin kappa constant##AK129807|IGK@|50802|immunoglobulin kappa locus##BC016380|IGK@|50802|immunoglobulin kappa locus##BC062704|IGK@|50802|immunoglobulin kappa locus##AY894991|IGKC|3514|immunoglobulin kappa constant##BC056256|IGKC|3514|immunoglobulin kappa constant##BC070336|IGKC|3514|immunoglobulin kappa constant##BC070334|IGKC|3514|immunoglobulin kappa constant	0.988725	CTCF.p2:14:0.989
chr4	7009764	7009830	reg1035736.p1	3.607	+	NM_001113363 TSC_hg19_v1_chr4_+_6988958	-20844	+	BC042376 TSC_hg19_v1_chr4_-_6988764 BC035129	-21031	-	TSC_hg19_v1_chr4_+_6911552 BC041167	-98231	+	HQ258308 AK075056 TSC_hg19_v1_chr4_-_7044729 BC105055 BC112274 NM_153376	34906	-	TSC_hg19_v1_chr4_+_7045111 BC101334 BC101335 BC101336 BC101337	35319	+	TSC_hg19_v1_chr4_+_7045213 BC047794 NM_152293	35383	+	NM_001113363|TBC1D14|57533|TBC1 domain family, member 14##BC042376|LOC100134937|100134937|uncharacterized LOC100134937##BC035129|LOC100134937|100134937|uncharacterized LOC100134937##BC041167|TBC1D14|57533|TBC1 domain family, member 14##HQ258308|CCDC96|257236|coiled-coil domain containing 96##AK075056|CCDC96|257236|coiled-coil domain containing 96##BC105055|CCDC96|257236|coiled-coil domain containing 96##BC112274|CCDC96|257236|coiled-coil domain containing 96##NM_153376|CCDC96|257236|coiled-coil domain containing 96##BC101334|TADA2B|93624|transcriptional adaptor 2B##BC101335|TADA2B|93624|transcriptional adaptor 2B##BC101336|TADA2B|93624|transcriptional adaptor 2B##BC101337|TADA2B|93624|transcriptional adaptor 2B##BC047794|TADA2B|93624|transcriptional adaptor 2B##NM_152293|TADA2B|93624|transcriptional adaptor 2B	0.0	
chrX	61913538	61913640	reg1044474.p1	3.607	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-3976630	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-4295129	+	NM_007157	-4295321	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	657610	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	734678	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	867278	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.0	
chr10	6056486	6056667	reg1003127.p2	3.606	+	AF035279 BC107777 BC065506 NM_001243539	-36562	-	CR542023 HQ401283 AB590464 BC121140 AK304211 BC074726 BC121141 U31628 NM_002189 NM_172200	-37063	-	AF380349 NM_032807	-120228	+	AB528862 AK223313 K03122 X01057 AK313847 NM_000417	47646	-	TSC_hg19_v1_chr10_+_6130954 NM_032905	74373	+	TSC_hg19_v1_chr10_+_6131024 AF542550 AK314952	74423	+	AF035279|IL15RA|3601|interleukin 15 receptor, alpha##BC107777|IL15RA|3601|interleukin 15 receptor, alpha##BC065506|IL15RA|3601|interleukin 15 receptor, alpha##NM_001243539|IL15RA|3601|interleukin 15 receptor, alpha##CR542023|IL15RA|3601|interleukin 15 receptor, alpha##HQ401283|IL15RA|3601|interleukin 15 receptor, alpha##BC121140|IL15RA|3601|interleukin 15 receptor, alpha##AK304211|IL15RA|3601|interleukin 15 receptor, alpha##BC074726|IL15RA|3601|interleukin 15 receptor, alpha##BC121141|IL15RA|3601|interleukin 15 receptor, alpha##U31628|IL15RA|3601|interleukin 15 receptor, alpha##NM_002189|IL15RA|3601|interleukin 15 receptor, alpha##NM_172200|IL15RA|3601|interleukin 15 receptor, alpha##AF380349|FBXO18|84893|F-box protein, helicase, 18##NM_032807|FBXO18|84893|F-box protein, helicase, 18##AK223313|IL2RA|3559|interleukin 2 receptor, alpha##K03122|IL2RA|3559|interleukin 2 receptor, alpha##X01057|IL2RA|3559|interleukin 2 receptor, alpha##AK313847|IL2RA|3559|interleukin 2 receptor, alpha##NM_000417|IL2RA|3559|interleukin 2 receptor, alpha##NM_032905|RBM17|84991|RNA binding motif protein 17##AF542550|RBM17|84991|RNA binding motif protein 17##AK314952|RBM17|84991|RNA binding motif protein 17	0.0	
chr1	110786339	110786520	reg1043204.p2	3.606	+	AK310193 M64676 TSC_hg19_v1_chr1_+_110754079 BC101769	-32432	+	TSC_hg19_v1_chr1_+_110753347 NM_001039574 NM_004978	-33085	+	NM_001010898 AK289982 TSC_hg19_v1_chr1_+_110693135	-93295	+	AF368062 AF368063 AF368064 NM_001201545 NM_022768 BC098140 BC103493 BC103507 BC103660 TSC_hg19_v1_chr1_+_110882045	95565	+	BC047479 TSC_hg19_v1_chr1_+_110882057	95628	+	TSC_hg19_v1_chr1_+_110882092 AK022541 BC006397 BC062316	95652	+	AK310193|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##M64676|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##BC101769|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_001039574|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_004978|KCNC4|3749|potassium voltage-gated channel, Shaw-related subfamily, member 4##NM_001010898|SLC6A17|388662|solute carrier family 6, member 17##AK289982|SLC6A17|388662|solute carrier family 6, member 17##AF368062|RBM15|64783|RNA binding motif protein 15##AF368063|RBM15|64783|RNA binding motif protein 15##AF368064|RBM15|64783|RNA binding motif protein 15##NM_001201545|RBM15|64783|RNA binding motif protein 15##NM_022768|RBM15|64783|RNA binding motif protein 15##BC098140|RBM15|64783|RNA binding motif protein 15##BC103493|RBM15|64783|RNA binding motif protein 15##BC103507|RBM15|64783|RNA binding motif protein 15##BC103660|RBM15|64783|RNA binding motif protein 15##BC047479|RBM15|64783|RNA binding motif protein 15##AK022541|RBM15|64783|RNA binding motif protein 15##BC006397|RBM15|64783|RNA binding motif protein 15##BC062316|RBM15|64783|RNA binding motif protein 15	0.0	
chr11	21536001	21536097	reg1041080.p1	3.606	+	AK127805 AK299558 NM_006157 NM_201551 AK313445 AK303736 D83017 BC069674 BC096100 BC096101 BC096102 BC096103 CU686968	-844857	+	NM_004211 AF085412	-915102	+	BC047226 TSC_hg19_v1_chr11_+_20409261 AK301449 AK298185 AK300591 BC037544 AB590779 EU831425 EU831518	-1126789	+	TSC_hg19_v1_chr11_+_22214577 AB125267 AL832374 AL833271 NM_001142649 NM_213599	678598	+	AB032435 NM_020346	823617	+	TSC_hg19_v1_chr11_-_22647372 AF181995 AB464520 BC047028 AF181994 AK223277 AK001716 AK023153 BX640996 BC093867 BC101807 BC035346 BC063038 NM_022725	1111312	-	AK127805|NELL1|4745|NEL-like 1 (chicken)##AK299558|NELL1|4745|NEL-like 1 (chicken)##NM_006157|NELL1|4745|NEL-like 1 (chicken)##NM_201551|NELL1|4745|NEL-like 1 (chicken)##AK313445|NELL1|4745|NEL-like 1 (chicken)##AK303736|NELL1|4745|NEL-like 1 (chicken)##D83017|NELL1|4745|NEL-like 1 (chicken)##BC069674|NELL1|4745|NEL-like 1 (chicken)##BC096100|NELL1|4745|NEL-like 1 (chicken)##BC096101|NELL1|4745|NEL-like 1 (chicken)##BC096102|NELL1|4745|NEL-like 1 (chicken)##BC096103|NELL1|4745|NEL-like 1 (chicken)##NM_004211|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##AF085412|SLC6A5|9152|solute carrier family 6 (neurotransmitter transporter, glycine), member 5##BC047226|PRMT3|10196|protein arginine methyltransferase 3##AK301449|PRMT3|10196|protein arginine methyltransferase 3##AK298185|PRMT3|10196|protein arginine methyltransferase 3##AK300591|PRMT3|10196|protein arginine methyltransferase 3##BC037544|PRMT3|10196|protein arginine methyltransferase 3##EU831425|PRMT3|10196|protein arginine methyltransferase 3##EU831518|PRMT3|10196|protein arginine methyltransferase 3##AB125267|ANO5|203859|anoctamin 5##AL832374|ANO5|203859|anoctamin 5##AL833271|ANO5|203859|anoctamin 5##NM_001142649|ANO5|203859|anoctamin 5##NM_213599|ANO5|203859|anoctamin 5##AB032435|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##NM_020346|SLC17A6|57084|solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6##AF181995|FANCF|2188|Fanconi anemia, complementation group F##BC047028|FANCF|2188|Fanconi anemia, complementation group F##AF181994|FANCF|2188|Fanconi anemia, complementation group F##AK223277|FANCF|2188|Fanconi anemia, complementation group F##AK001716|FANCF|2188|Fanconi anemia, complementation group F##AK023153|FANCF|2188|Fanconi anemia, complementation group F##BX640996|FANCF|2188|Fanconi anemia, complementation group F##BC093867|FANCF|2188|Fanconi anemia, complementation group F##BC101807|FANCF|2188|Fanconi anemia, complementation group F##BC063038|FANCF|2188|Fanconi anemia, complementation group F##NM_022725|FANCF|2188|Fanconi anemia, complementation group F	0.017156	
chr12	133337268	133337391	reg1039169.p1	3.606	+	AK025933 TSC_hg19_v1_chr12_-_133306584	-30771	-	TSC_hg19_v1_chr12_+_133287427 NM_001170543 NM_001170544 NM_138575 EU249757 BC008196	-49893	+	TSC_hg19_v1_chr12_+_133264236 AF250136 NM_018663 BC073997 AY044439	-73125	+	TSC_hg19_v1_chr12_-_133338419 BC043157 NM_015114	1091	-	BC048203 TSC_hg19_v1_chr12_-_133372555	35228	-	TSC_hg19_v1_chr12_-_133404955 D63997 AB027133	67650	-	AK025933|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##NM_001170543|PGAM5|192111|phosphoglycerate mutase family member 5##NM_001170544|PGAM5|192111|phosphoglycerate mutase family member 5##NM_138575|PGAM5|192111|phosphoglycerate mutase family member 5##EU249757|PGAM5|192111|phosphoglycerate mutase family member 5##BC008196|PGAM5|192111|phosphoglycerate mutase family member 5##AF250136|PXMP2|5827|peroxisomal membrane protein 2, 22kDa##NM_018663|PXMP2|5827|peroxisomal membrane protein 2, 22kDa##BC073997|PXMP2|5827|peroxisomal membrane protein 2, 22kDa##AY044439|PXMP2|5827|peroxisomal membrane protein 2, 22kDa##BC043157|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##NM_015114|ANKLE2|23141|ankyrin repeat and LEM domain containing 2##D63997|GOLGA3|2802|golgin A3##AB027133|GOLGA3|2802|golgin A3	0.0	
chr12	92637929	92638075	reg1037910.p1	3.606	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-98359	-	NM_001920	-1061197	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-1061422	-	AJ845165 AJ845166 NM_001025233	179732	+	AJ845168 NM_001025232	183921	-	NM_001037671 NM_001178097	458616	+	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74	0.011179	
chr1	67680626	67680788	reg1010694.p2	3.606	+	AF461422 NM_144701	-48539	+	NM_001013674	-86488	-	TSC_hg19_v1_chr1_-_67520070 AK289800 NM_015139	-160654	-	NM_001559 U64198 TSC_hg19_v1_chr1_+_67773087	92374	+	AK294494 TSC_hg19_v1_chr1_+_67773565 AK316525	92856	+	CR457383 AB527591 CU675982 CU676556 CU677990 CU693242 EU831446 EU831638 EU831722 EU832650 EU832728 TSC_hg19_v1_chr1_-_67896065 BC003049 AK130606 BC002488 BC008045 BC017449 BC020555 BC026916 BC019273 AL080119 AF151813	215316	-	AF461422|IL23R|149233|interleukin 23 receptor##NM_144701|IL23R|149233|interleukin 23 receptor##NM_001013674|C1orf141|400757|chromosome 1 open reading frame 141##AK289800|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_015139|SLC35D1|23169|solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1##NM_001559|IL12RB2|3595|interleukin 12 receptor, beta 2##U64198|IL12RB2|3595|interleukin 12 receptor, beta 2##AK294494|IL12RB2|3595|interleukin 12 receptor, beta 2##AK316525|IL12RB2|3595|interleukin 12 receptor, beta 2##CR457383|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831446|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831638|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU831722|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832650|SERBP1|26135|SERPINE1 mRNA binding protein 1##EU832728|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC003049|SERBP1|26135|SERPINE1 mRNA binding protein 1##AK130606|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC002488|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC008045|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC017449|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC020555|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC026916|SERBP1|26135|SERPINE1 mRNA binding protein 1##BC019273|SERBP1|26135|SERPINE1 mRNA binding protein 1##AL080119|SERBP1|26135|SERPINE1 mRNA binding protein 1##AF151813|SERBP1|26135|SERPINE1 mRNA binding protein 1	0.0	
chr18	77793520	77793639	reg1041155.p2	3.606	+	AF146373 AB528659 AK309098 TSC_hg19_v1_chr18_-_77748548 AF023611 AF023612 BC001046 BC019272 NM_006701 AK314901	-45109	-	TSC_hg19_v1_chr18_+_77724644 NM_001136180 BC040056 BC017654 BC157848	-68956	+	AK301881 NM_001146343 NM_001146345 NM_025078 TSC_hg19_v1_chr18_-_77711653	-81927	-	AK308703 TSC_hg19_v1_chr18_-_77793959	357	-	AK307212 NM_001171967 NM_024805 AK024825 TSC_hg19_v1_chr18_+_77794477 AK311463 AK311239 AF261073 AF439745 BC057772 BC014195 CU680826	887	+	BC071589 NM_014913	73335	+	AF146373|TXNL4A|10907|thioredoxin-like 4A##AK309098|TXNL4A|10907|thioredoxin-like 4A##AF023611|TXNL4A|10907|thioredoxin-like 4A##AF023612|TXNL4A|10907|thioredoxin-like 4A##BC001046|TXNL4A|10907|thioredoxin-like 4A##BC019272|TXNL4A|10907|thioredoxin-like 4A##NM_006701|TXNL4A|10907|thioredoxin-like 4A##AK314901|TXNL4A|10907|thioredoxin-like 4A##NM_001136180|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC040056|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC017654|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC157848|HSBP1L1|440498|heat shock factor binding protein 1-like 1##AK301881|PQLC1|80148|PQ loop repeat containing 1##NM_001146343|PQLC1|80148|PQ loop repeat containing 1##NM_001146345|PQLC1|80148|PQ loop repeat containing 1##NM_025078|PQLC1|80148|PQ loop repeat containing 1##AK307212|RBFA|79863|ribosome binding factor A (putative)##NM_001171967|RBFA|79863|ribosome binding factor A (putative)##NM_024805|RBFA|79863|ribosome binding factor A (putative)##AK024825|RBFA|79863|ribosome binding factor A (putative)##AK311463|RBFA|79863|ribosome binding factor A (putative)##AK311239|RBFA|79863|ribosome binding factor A (putative)##AF261073|RBFA|79863|ribosome binding factor A (putative)##AF439745|RBFA|79863|ribosome binding factor A (putative)##BC057772|RBFA|79863|ribosome binding factor A (putative)##BC014195|RBFA|79863|ribosome binding factor A (putative)##BC071589|ADNP2|22850|ADNP homeobox 2##NM_014913|ADNP2|22850|ADNP homeobox 2	0.0	
chr19	42069695	42069865	reg1004832.p1	3.606	+	NM_001130514	-120718	+	TSC_hg19_v1_chr19_-_41945831 AK298197 NM_001167869 NM_001167870 NM_001167871 NM_018035	-123947	-	TSC_hg19_v1_chr19_-_41945814 BC013323 AK316313	-123966	-	BC012001 NM_001098506 NM_033543 TSC_hg19_v1_chr19_+_42082583 AY358084 BC106727 CU680160	12797	+	D90276 AK298701 NM_001817	63654	-	AF006622 AF006623 L31792 NM_006890 X98311 BC121132 TSC_hg19_v1_chr19_-_42192198 AK292213 AK296634 AK311285 AK313108	122372	-	NM_001130514|C19orf69|100170765|chromosome 19 open reading frame 69##AK298197|ATP5SL|55101|ATP5S-like##NM_001167869|ATP5SL|55101|ATP5S-like##NM_001167870|ATP5SL|55101|ATP5S-like##NM_001167871|ATP5SL|55101|ATP5S-like##NM_018035|ATP5SL|55101|ATP5S-like##BC013323|ATP5SL|55101|ATP5S-like##AK316313|ATP5SL|55101|ATP5S-like##BC012001|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_001098506|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##NM_033543|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##AY358084|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##BC106727|CEACAM21|90273|carcinoembryonic antigen-related cell adhesion molecule 21##D90276|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AK298701|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##NM_001817|CEACAM4|1089|carcinoembryonic antigen-related cell adhesion molecule 4##AF006622|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AF006623|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##L31792|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##NM_006890|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##X98311|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##BC121132|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK292213|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK296634|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK311285|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7##AK313108|CEACAM7|1087|carcinoembryonic antigen-related cell adhesion molecule 7	0.0	
chr19	48707104	48707259	reg1035568.p2	3.606	+	TSC_hg19_v1_chr19_+_48673949 BC043386	-33228	+	M36067 NM_000234 TSC_hg19_v1_chr19_-_48673602 AK314210 AK297296 AK303644 AB208791 AK225863 AK300370	-33600	-	AF058921 BC017956 AK022440 TSC_hg19_v1_chr19_-_48614075 AF065214 BC063416 AK314524 AK295400 NM_001159322 NM_001159323 NM_003706	-93121	-	CU691176 EU118120 EU118121 NM_001184900	37116	-	AB023172 AF322184 AF511652 TSC_hg19_v1_chr19_-_48753084 BC041697 BC045539 AK302327 AK311079 AK297045 BX648568 AK297069 NM_001184901 NM_001184903 NM_014959	45843	-	AK125548 TSC_hg19_v1_chr19_+_48758936 BC060888 BC008448 BC033836	51768	+	BC043386|C19orf68|374920|chromosome 19 open reading frame 68##M36067|LIG1|3978|ligase I, DNA, ATP-dependent##NM_000234|LIG1|3978|ligase I, DNA, ATP-dependent##AK314210|LIG1|3978|ligase I, DNA, ATP-dependent##AK297296|LIG1|3978|ligase I, DNA, ATP-dependent##AK303644|LIG1|3978|ligase I, DNA, ATP-dependent##AB208791|LIG1|3978|ligase I, DNA, ATP-dependent##AK225863|LIG1|3978|ligase I, DNA, ATP-dependent##AK300370|LIG1|3978|ligase I, DNA, ATP-dependent##AF058921|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC017956|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK022440|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AF065214|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##BC063416|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK314524|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##AK295400|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159322|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_001159323|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##NM_003706|PLA2G4C|8605|phospholipase A2, group IVC (cytosolic, calcium-independent)##EU118120|CARD8|22900|caspase recruitment domain family, member 8##EU118121|CARD8|22900|caspase recruitment domain family, member 8##NM_001184900|CARD8|22900|caspase recruitment domain family, member 8##AB023172|CARD8|22900|caspase recruitment domain family, member 8##AF322184|CARD8|22900|caspase recruitment domain family, member 8##AF511652|CARD8|22900|caspase recruitment domain family, member 8##BC041697|CARD8|22900|caspase recruitment domain family, member 8##BC045539|CARD8|22900|caspase recruitment domain family, member 8##AK302327|CARD8|22900|caspase recruitment domain family, member 8##AK311079|CARD8|22900|caspase recruitment domain family, member 8##AK297045|CARD8|22900|caspase recruitment domain family, member 8##BX648568|CARD8|22900|caspase recruitment domain family, member 8##AK297069|CARD8|22900|caspase recruitment domain family, member 8##NM_001184901|CARD8|22900|caspase recruitment domain family, member 8##NM_001184903|CARD8|22900|caspase recruitment domain family, member 8##NM_014959|CARD8|22900|caspase recruitment domain family, member 8##AK125548|LOC100505812|100505812|uncharacterized LOC100505812##BC060888|LOC100505812|100505812|uncharacterized LOC100505812	0.0	
chr2	111436984	111437092	reg1040086.p2	3.606	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-1216	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-1395	-	AL136868 NM_001037866 NM_001123363 NM_032260	-100730	-	AK300513 NM_001142807 BC022268	53141	+	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	441449	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	1204588	-	AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AL136868|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001037866|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_001123363|RGPD6|729540|RANBP2-like and GRIP domain containing 6##NM_032260|RGPD5|84220|RANBP2-like and GRIP domain containing 5##AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1	0.106669	
chr22	26019358	26019461	reg1037255.p1	3.606	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-58463	+	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	-58610	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	-175333	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	118711	+	TSC_hg19_v1_chr22_+_26138168 AY077700	118775	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	546028	+	BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##AY077700|MYO18B|84700|myosin XVIIIB##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.0	
chr2	233944342	233944439	reg1040126.p2	3.606	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-19274	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-19331	+	BC069151 BC107053 NM_005383	-47009	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	215876	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	215933	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	215967	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.0	
chr3	156781879	156781946	reg1031229.p1	3.606	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-237801	+	BC034397 NM_001184718	-387460	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-388497	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	95997	-	NM_020307 AK122738	96602	-	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	372738	+	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long	0.887783	CTCF.p2:52:0.888
chr4	153561246	153561427	reg1007729.p1	3.606	+	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	-103903	+	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	-105042	-	NM_001013415 AY008274	-257672	-	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	39864	-	BC037869 NM_145720	139567	-	TSC_hg19_v1_chr4_+_153701018 AK304141 AK299600 NM_001025593 NM_001025595 NM_014447	139685	+	AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154##BC037869|TIGD4|201798|tigger transposable element derived 4##NM_145720|TIGD4|201798|tigger transposable element derived 4##AK304141|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##AK299600|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025593|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_001025595|ARFIP1|27236|ADP-ribosylation factor interacting protein 1##NM_014447|ARFIP1|27236|ADP-ribosylation factor interacting protein 1	0.0	
chr7	21392650	21392822	reg1035629.p2	3.606	+	TSC_hg19_v1_chr7_-_20826527 AK056857 AK307969 AY167047 BC038669 AK290465 NM_182700 NM_198956	-566202	-	TSC_hg19_v1_chr7_-_20826429 AK299947	-566308	-	TSC_hg19_v1_chr7_-_20825382 AB464710	-567354	-	TSC_hg19_v1_chr7_+_21467717 AK289728 AK296749 NM_003112 X68561 BC109300 BC109301	75083	+	AB591008 TSC_hg19_v1_chr7_+_21468356	75588	+	AJ320497 NM_003777	190096	+	AK056857|SP8|221833|Sp8 transcription factor##AK307969|SP8|221833|Sp8 transcription factor##AY167047|SP8|221833|Sp8 transcription factor##BC038669|SP8|221833|Sp8 transcription factor##AK290465|SP8|221833|Sp8 transcription factor##NM_182700|SP8|221833|Sp8 transcription factor##NM_198956|SP8|221833|Sp8 transcription factor##AK299947|SP8|221833|Sp8 transcription factor##AK289728|SP4|6671|Sp4 transcription factor##AK296749|SP4|6671|Sp4 transcription factor##NM_003112|SP4|6671|Sp4 transcription factor##X68561|SP4|6671|Sp4 transcription factor##BC109300|SP4|6671|Sp4 transcription factor##BC109301|SP4|6671|Sp4 transcription factor##AJ320497|DNAH11|8701|dynein, axonemal, heavy chain 11##NM_003777|DNAH11|8701|dynein, axonemal, heavy chain 11	0.0	
chr11	111230142	111230245	reg1039537.p2	3.605	+	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	-60160	+	BC039669 NM_198498	-103487	+	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	-646908	-	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	19759	-	NM_006235	19963	-	BC031045 NM_017589	152877	-	AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##BC039669|C11orf53|341032|chromosome 11 open reading frame 53##NM_198498|C11orf53|341032|chromosome 11 open reading frame 53##AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##NM_006235|POU2AF1|5450|POU class 2 associating factor 1##BC031045|BTG4|54766|B-cell translocation gene 4##NM_017589|BTG4|54766|B-cell translocation gene 4	0.0	
chr11	126732736	126732890	reg1013744.p1	3.605	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	-456815	+	NM_006278 X74570	-506718	+	TSC_hg19_v1_chr11_-_126225452 AK096370	-507350	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	137847	-	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	137912	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	140492	+	AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK096370|FLJ39051|399972|uncharacterized LOC399972##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)	0.0	
chr11	93358046	93358173	reg1034626.p2	3.605	+	AF197137 TSC_hg19_v1_chr11_-_93276558 BC031564 NM_020179	-81574	-	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	-294266	+	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	-427024	-	TSC_hg19_v1_chr11_+_93394847 NM_033395 BC015989 BC017394	36725	+	AB051518 TSC_hg19_v1_chr11_+_93394877	36780	+	AF275800 TSC_hg19_v1_chr11_-_93474661 BC001972 AF086435 AK027016 NM_024116	116497	-	AF197137|C11orf75|56935|chromosome 11 open reading frame 75##BC031564|C11orf75|56935|chromosome 11 open reading frame 75##NM_020179|C11orf75|56935|chromosome 11 open reading frame 75##NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_033395|KIAA1731|85459|KIAA1731##BC015989|KIAA1731|85459|KIAA1731##BC017394|KIAA1731|85459|KIAA1731##AB051518|KIAA1731|85459|KIAA1731##AF275800|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##BC001972|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AF086435|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##AK027016|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa##NM_024116|TAF1D|79101|TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa	0.0	
chr12	90150503	90150676	reg1040751.p1	3.605	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-47044	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-47902	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-100738	-	BC026075 BC024183 BC027600 BC034491 NM_152638	1198362	-	U59111 TSC_hg19_v1_chr12_-_91398750	1248158	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	1248190	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.0	
chr14	68840970	68841106	reg1039882.p2	3.605	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-554518	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-557739	-	AK315462 NM_152443	-672436	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	418682	-	NM_001244698 NM_004926	419592	-	NM_001244701 AB528867	421946	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.045566	
chr18	6482464	6482645	reg1004874.p1	3.605	+	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	-67639	-	NM_001080209	-590452	-	TSC_hg19_v1_chr18_-_5630663 BC008377	-851907	-	NM_001243517	28860	+	NM_001010000 BX648684 AK308259 AK302026	351911	+	BC144590 NM_005559 X58531	635230	-	BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001080209|TMEM200C|645369|transmembrane protein 200C##BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28##BC144590|LAMA1|284217|laminin, alpha 1##NM_005559|LAMA1|284217|laminin, alpha 1##X58531|LAMA1|284217|laminin, alpha 1	0.0	
chr4	36246194	36246281	reg1035574.p1	3.605	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	-200	-	TSC_hg19_v1_chr4_+_30722465 AB006756	-5523778	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-5524043	+	AK131492 NM_001136536 AK304357 AK316523	37009	+	BC157885 NM_001170700	39406	+	NM_001144990	1000452	+	AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##NM_001144990|KIAA1239|57495|KIAA1239	0.0	
chr6	106550063	106550241	reg1042512.p2	3.605	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	-3348	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	-15917	+	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	-15956	+	BC002699 TSC_hg19_v1_chr6_-_106773313	223156	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	223380	-	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	223511	-	AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	0.0	
chr6	33575448	33575574	reg1008060.p1	3.605	+	TSC_hg19_v1_chr6_-_33548037 AK303422 AK293547 NM_001188	-27468	-	U23765 U16811 TSC_hg19_v1_chr6_-_33547998 X84213 BC004431 BC032789 BC110337 AK091807 AK292093	-27596	-	TSC_hg19_v1_chr6_+_33422352 AK313571 AK122644 NM_152735 BC014978	-153139	+	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	13683	+	EF139858 AF086234 TSC_hg19_v1_chr6_-_33679476 AK311835	103952	-	TSC_hg19_v1_chr6_-_33679505 AY568085 BC006007 NM_032340	104002	-	AK303422|BAK1|578|BCL2-antagonist/killer 1##AK293547|BAK1|578|BCL2-antagonist/killer 1##NM_001188|BAK1|578|BCL2-antagonist/killer 1##U23765|BAK1|578|BCL2-antagonist/killer 1##U16811|BAK1|578|BCL2-antagonist/killer 1##X84213|BAK1|578|BCL2-antagonist/killer 1##BC004431|BAK1|578|BCL2-antagonist/killer 1##BC032789|BAK1|578|BCL2-antagonist/killer 1##BC110337|BAK1|578|BCL2-antagonist/killer 1##AK091807|BAK1|578|BCL2-antagonist/killer 1##AK292093|BAK1|578|BCL2-antagonist/killer 1##AK313571|ZBTB9|221504|zinc finger and BTB domain containing 9##AK122644|ZBTB9|221504|zinc finger and BTB domain containing 9##NM_152735|ZBTB9|221504|zinc finger and BTB domain containing 9##BC014978|ZBTB9|221504|zinc finger and BTB domain containing 9##D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##AF086234|C6orf125|84300|chromosome 6 open reading frame 125##AK311835|C6orf125|84300|chromosome 6 open reading frame 125##AY568085|C6orf125|84300|chromosome 6 open reading frame 125##BC006007|C6orf125|84300|chromosome 6 open reading frame 125##NM_032340|C6orf125|84300|chromosome 6 open reading frame 125	0.0	
chr6_mcf_hap5	3778785	3778966	reg1020889.p2	3.605	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr7	90225343	90225429	reg1028806.p1	3.605	+	TSC_hg19_v1_chr7_+_90032774 AL136770 BC016061	-192582	+	NM_001185072 NM_001185073 NM_012129 TSC_hg19_v1_chr7_+_90032761 BC068532 AK312480	-192682	+	TSC_hg19_v1_chr7_+_89976015 AF351613 NM_001042717 NM_033107 AK095561 BC107714 CR933597 AK294325 BC144162	-249382	+	TSC_hg19_v1_chr7_+_90225634 AK297974 AF119833	423	+	AB020641 BC152436 BC167152 BC167156 NM_012395 BC136477 AK289782 AB384534 BC152388	113397	+	AK295086 AK296406 AK307484 AK316026 TSC_hg19_v1_chr7_+_90339175	113774	+	AL136770|CLDN12|9069|claudin 12##NM_001185072|CLDN12|9069|claudin 12##NM_001185073|CLDN12|9069|claudin 12##NM_012129|CLDN12|9069|claudin 12##BC068532|CLDN12|9069|claudin 12##AK312480|CLDN12|9069|claudin 12##AF351613|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_001042717|GTPBP10|85865|GTP-binding protein 10 (putative)##NM_033107|GTPBP10|85865|GTP-binding protein 10 (putative)##AK095561|GTPBP10|85865|GTP-binding protein 10 (putative)##BC107714|GTPBP10|85865|GTP-binding protein 10 (putative)##CR933597|GTPBP10|85865|GTP-binding protein 10 (putative)##AK294325|GTPBP10|85865|GTP-binding protein 10 (putative)##BC144162|GTPBP10|85865|GTP-binding protein 10 (putative)##AK297974|CDK14|5218|cyclin-dependent kinase 14##AF119833|CDK14|5218|cyclin-dependent kinase 14##AB020641|CDK14|5218|cyclin-dependent kinase 14##BC152436|CDK14|5218|cyclin-dependent kinase 14##BC167152|CDK14|5218|cyclin-dependent kinase 14##BC167156|CDK14|5218|cyclin-dependent kinase 14##NM_012395|CDK14|5218|cyclin-dependent kinase 14##BC136477|CDK14|5218|cyclin-dependent kinase 14##AK289782|CDK14|5218|cyclin-dependent kinase 14##BC152388|CDK14|5218|cyclin-dependent kinase 14##AK295086|CDK14|5218|cyclin-dependent kinase 14##AK296406|CDK14|5218|cyclin-dependent kinase 14##AK307484|CDK14|5218|cyclin-dependent kinase 14##AK316026|CDK14|5218|cyclin-dependent kinase 14	0.939864	CTCF.p2:-93:0.940
chrX	64815622	64815802	reg1001897.p2	3.605	+	TSC_hg19_v1_chrX_-_64754668 AK074087 BC014545 NM_001170649 NM_001170650 NM_031206	-61048	-	CU677041 TSC_hg19_v1_chrX_-_64754635 AK225059 AF116730 BC019302 BC018610 AK022587 AK097383 AK295591	-61097	-	BC140767 BC171781 NM_001010888 BX647241	-107053	+	NM_002444 TSC_hg19_v1_chrX_+_64887520	71805	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	71835	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	71936	+	AK074087|LAS1L|81887|LAS1-like (S. cerevisiae)##BC014545|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_001170649|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_001170650|LAS1L|81887|LAS1-like (S. cerevisiae)##NM_031206|LAS1L|81887|LAS1-like (S. cerevisiae)##AK225059|LAS1L|81887|LAS1-like (S. cerevisiae)##AF116730|LAS1L|81887|LAS1-like (S. cerevisiae)##BC019302|LAS1L|81887|LAS1-like (S. cerevisiae)##BC018610|LAS1L|81887|LAS1-like (S. cerevisiae)##AK022587|LAS1L|81887|LAS1-like (S. cerevisiae)##AK097383|LAS1L|81887|LAS1-like (S. cerevisiae)##AK295591|LAS1L|81887|LAS1-like (S. cerevisiae)##BC140767|ZC3H12B|340554|zinc finger CCCH-type containing 12B##BC171781|ZC3H12B|340554|zinc finger CCCH-type containing 12B##NM_001010888|ZC3H12B|340554|zinc finger CCCH-type containing 12B##BX647241|ZC3H12B|340554|zinc finger CCCH-type containing 12B##NM_002444|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin	0.0	
chr1	192508250	192508379	reg1030805.p2	3.604	+	AY643711 NM_001039152	-222193	+	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	-380711	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	-2061579	-	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	36594	+	NM_002927 NM_144766 AF030107 BC016667	96970	+	BC042755 BC044742 NM_002923 TSC_hg19_v1_chr1_+_192778168 AK313668 BC007049 L13463 AY971351 AB528517 AF493926 BT007065 CR457410 CU675517 DQ893178 DQ896478	269870	+	AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1##NM_002927|RGS13|6003|regulator of G-protein signaling 13##NM_144766|RGS13|6003|regulator of G-protein signaling 13##AF030107|RGS13|6003|regulator of G-protein signaling 13##BC016667|RGS13|6003|regulator of G-protein signaling 13##BC042755|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC044742|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002923|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AK313668|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC007049|RGS2|5997|regulator of G-protein signaling 2, 24kDa##L13463|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AY971351|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AF493926|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT007065|RGS2|5997|regulator of G-protein signaling 2, 24kDa##CR457410|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ893178|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ896478|RGS2|5997|regulator of G-protein signaling 2, 24kDa	0.0	
chr12	45610144	45610276	reg1028053.p4	3.604	+	TSC_hg19_v1_chr12_+_45609916 BC098410	-303	+	TSC_hg19_v1_chr12_+_45609867 AK302819 NM_001142680	-339	+	TSC_hg19_v1_chr12_+_45609845 AK303996	-361	+	AL832340 NM_001142678	76255	+	TSC_hg19_v1_chr12_-_46121280 BC037237 BC008245	511063	-	TSC_hg19_v1_chr12_-_46121531 BC047417	511320	-	BC098410|ANO6|196527|anoctamin 6##AK302819|ANO6|196527|anoctamin 6##NM_001142680|ANO6|196527|anoctamin 6##AK303996|ANO6|196527|anoctamin 6##AL832340|ANO6|196527|anoctamin 6##NM_001142678|ANO6|196527|anoctamin 6##BC037237|LOC400027|400027|uncharacterized LOC400027##BC008245|LOC400027|400027|uncharacterized LOC400027##BC047417|LOC400027|400027|uncharacterized LOC400027	0.0	
chr13	107173080	107173180	reg1031393.p1	3.604	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	-1054539	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	-1054826	+	NM_000452 U10417	-3453935	-	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	14219	-	TSC_hg19_v1_chr13_-_107220486 BC050434 BC071587 AK304751 AK001016 AK303575 NM_018011	47355	-	NM_001080396	1346329	-	NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2##BC050434|ARGLU1|55082|arginine and glutamate rich 1##BC071587|ARGLU1|55082|arginine and glutamate rich 1##AK001016|ARGLU1|55082|arginine and glutamate rich 1##NM_018011|ARGLU1|55082|arginine and glutamate rich 1##NM_001080396|FAM155A|728215|family with sequence similarity 155, member A	0.021101	
chr1	32804101	32804167	reg1040292.p2	3.604	+	TSC_hg19_v1_chr1_-_32801835 AB528178 CU688192 AM393505 DQ893237 DQ896567 X70326 AL713653 AY007131 BC007904 BC066915 NM_023009	-2403	-	TSC_hg19_v1_chr1_+_32757740 BC000301 AK299792 AY627042 AB451297 AB451430 AB463736 CR541717 CU674144 DQ891398 DQ894577	-46394	+	D50405 NM_004964 TSC_hg19_v1_chr1_+_32757707	-46426	+	BC035354 NM_052841	23695	+	NM_001167676	23709	-	CR457252 TSC_hg19_v1_chr1_-_32860030 BC010573 CR749228 BX641056 AK300231 BC026322 AK297604 AK300306 AK001138 AK225717 AK293454 BC028381 AK021440 AK297352 AK225026 AK304477 AK316172 NM_001143888 NM_001143889 NM_001143890 NM_018045	55903	-	AM393505|MARCKSL1|65108|MARCKS-like 1##DQ893237|MARCKSL1|65108|MARCKS-like 1##DQ896567|MARCKSL1|65108|MARCKS-like 1##X70326|MARCKSL1|65108|MARCKS-like 1##AL713653|MARCKSL1|65108|MARCKS-like 1##AY007131|MARCKSL1|65108|MARCKS-like 1##BC007904|MARCKSL1|65108|MARCKS-like 1##BC066915|MARCKSL1|65108|MARCKS-like 1##NM_023009|MARCKSL1|65108|MARCKS-like 1##BC000301|HDAC1|3065|histone deacetylase 1##AK299792|HDAC1|3065|histone deacetylase 1##AY627042|HDAC1|3065|histone deacetylase 1##AB451297|HDAC1|3065|histone deacetylase 1##AB451430|HDAC1|3065|histone deacetylase 1##CR541717|HDAC1|3065|histone deacetylase 1##DQ891398|HDAC1|3065|histone deacetylase 1##DQ894577|HDAC1|3065|histone deacetylase 1##D50405|HDAC1|3065|histone deacetylase 1##NM_004964|HDAC1|3065|histone deacetylase 1##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071##CR457252|BSDC1|55108|BSD domain containing 1##BC010573|BSDC1|55108|BSD domain containing 1##CR749228|BSDC1|55108|BSD domain containing 1##BX641056|BSDC1|55108|BSD domain containing 1##AK300231|BSDC1|55108|BSD domain containing 1##BC026322|BSDC1|55108|BSD domain containing 1##AK297604|BSDC1|55108|BSD domain containing 1##AK300306|BSDC1|55108|BSD domain containing 1##AK001138|BSDC1|55108|BSD domain containing 1##AK225717|BSDC1|55108|BSD domain containing 1##AK293454|BSDC1|55108|BSD domain containing 1##BC028381|BSDC1|55108|BSD domain containing 1##AK021440|BSDC1|55108|BSD domain containing 1##AK297352|BSDC1|55108|BSD domain containing 1##AK225026|BSDC1|55108|BSD domain containing 1##AK304477|BSDC1|55108|BSD domain containing 1##AK316172|BSDC1|55108|BSD domain containing 1##NM_001143888|BSDC1|55108|BSD domain containing 1##NM_001143889|BSDC1|55108|BSD domain containing 1##NM_001143890|BSDC1|55108|BSD domain containing 1##NM_018045|BSDC1|55108|BSD domain containing 1	0.0	
chr13	30969718	30969899	reg1032364.p2	3.604	+	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-88239	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	-88657	-	TSC_hg19_v1_chr13_-_30424811 NM_007106	-544967	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	70185	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	70250	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	221819	-	AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##NM_007106|UBL3|5412|ubiquitin-like 3##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1	0.0	
chr13	43597632	43597809	reg1041670.p1	3.604	+	BC010910 AY512565 TSC_hg19_v1_chr13_+_43597741 AK311866 BC095400	-18	+	AF126743 AY248898 NM_013238	-371	+	CU692822 DQ892268 DQ895469 TSC_hg19_v1_chr13_-_43566378 AL831953 AF396928 BC023660 AK313877 AK292461 NM_001002264 NM_033255	-31350	-	BC024178 NM_001127615	605890	-	TSC_hg19_v1_chr13_-_44361107 BC068521 NM_001242863 NM_017993	763363	-	NM_001128303	855699	+	BC010910|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY512565|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AK311866|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##BC095400|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AF126743|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##AY248898|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##NM_013238|DNAJC15|29103|DnaJ (Hsp40) homolog, subfamily C, member 15##DQ892268|EPSTI1|94240|epithelial stromal interaction 1 (breast)##DQ895469|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AL831953|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AF396928|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC023660|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK313877|EPSTI1|94240|epithelial stromal interaction 1 (breast)##AK292461|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_001002264|EPSTI1|94240|epithelial stromal interaction 1 (breast)##NM_033255|EPSTI1|94240|epithelial stromal interaction 1 (breast)##BC024178|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001127615|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##BC068521|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001242863|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_017993|ENOX1|55068|ecto-NOX disulfide-thiol exchanger 1##NM_001128303|LACC1|144811|laccase (multicopper oxidoreductase) domain containing 1	0.0	
chr13	76374817	76374938	reg1041857.p2	3.604	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-40037	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-164407	+	AF330045 NM_005358	-180308	+	BC013764 TSC_hg19_v1_chr13_-_77460431	1085523	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	1085730	-	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	1191292	+	NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5	0.648855	CTCF.p2:2:0.649
chr14	105864676	105864767	reg1035721.p1	3.604	+	AK295579 AK294899 NM_001242786 NM_001242787	-82852	-	TSC_hg19_v1_chr14_+_105781197 BC050351 AB385359	-83459	+	TSC_hg19_v1_chr14_+_105781053 AB011174 BC065220	-83681	+	TSC_hg19_v1_chr14_+_105864874 NM_001195082	164	+	TSC_hg19_v1_chr14_+_105865463 AK124813	811	+	AK123017 TSC_hg19_v1_chr14_-_105886160	21414	-	AK295579|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##AK294899|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_001242786|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##NM_001242787|BRF1|2972|BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)##BC050351|PACS2|23241|phosphofurin acidic cluster sorting protein 2##AB011174|PACS2|23241|phosphofurin acidic cluster sorting protein 2##BC065220|PACS2|23241|phosphofurin acidic cluster sorting protein 2##NM_001195082|TEX22|647310|testis expressed 22##AK123017|LOC100507437|100507437|uncharacterized LOC100507437	0.0	
chr15	84841474	84841580	reg1036130.p1	3.604	+	NM_001243531	-286	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-518700	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-725299	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	302754	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	355945	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	355979	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	0.024936	
chr16	11345804	11345888	reg1029495.p1	3.604	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-307403	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-309611	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-309680	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	4204	-	X63758 BC096135 BC096136 BC096137 NM_005425	17292	-	NM_021247	21605	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr19	43523699	43523839	reg1037393.p1	3.604	+	BC136401 U18467 BC030979 AK309898 NM_001206650 NM_002783	-82480	-	CU676604 DQ893114 DQ896388 M31125 M33666 NM_002782 X17098 BC020652 NM_001031850	-101776	-	BT007413 CR450329 M33664 AB528216 AM393198 AM393602 AM393645 M25385 BC058285 J04539 M33663 M17908 M21822 M20879 M37397 AK300152 BC008405 AK311491 M20881 AK300206 BC022338 NM_001184825 NM_001184826 NM_006905 M34715 M17909	-139944	-	CU676656 M69245 U25988 BC020711 NM_001113410 NM_002785 NM_203287	6817	-	DQ891359 EU832659 EU832736 M20882 AK002132 BC022316 NM_031246	63038	-	AB527988 EU831982 EU832075 M73713 M25384 BC012607 NM_001130014 NM_002781	166853	-	BC136401|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##U18467|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##BC030979|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_001206650|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##NM_002783|PSG7|5676|pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)##DQ893114|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##DQ896388|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M31125|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##M33666|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_002782|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##X17098|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##BC020652|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##NM_001031850|PSG6|5675|pregnancy specific beta-1-glycoprotein 6##CR450329|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33664|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393198|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393602|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AM393645|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M25385|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC058285|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##J04539|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M33663|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17908|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M21822|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20879|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M37397|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300152|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC008405|PSG4|5672|pregnancy specific beta-1-glycoprotein 4##AK311491|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M20881|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##AK300206|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##BC022338|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184825|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_001184826|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##NM_006905|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M34715|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M17909|PSG1|5669|pregnancy specific beta-1-glycoprotein 1##M69245|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##U25988|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##BC020711|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_001113410|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_002785|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##NM_203287|PSG11|5680|pregnancy specific beta-1-glycoprotein 11##DQ891359|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832659|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU832736|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##M20882|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##BC022316|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##NM_031246|PSG2|5670|pregnancy specific beta-1-glycoprotein 2##EU831982|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##EU832075|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M73713|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##M25384|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##BC012607|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_001130014|PSG5|5673|pregnancy specific beta-1-glycoprotein 5##NM_002781|PSG5|5673|pregnancy specific beta-1-glycoprotein 5	0.454547	CTCF.p2:12:0.455
chr19	55737101	55737190	reg1033955.p2	3.604	+	TSC_hg19_v1_chr19_-_55720815 BC111715 BC111716 D15049 AK097257 NM_001161440 NM_002842	-16281	-	AK125182 TSC_hg19_v1_chr19_-_55691510 AK313067 BC033683 BC046157 BC029962 NM_003180	-45552	-	TSC_hg19_v1_chr19_-_55690722 AK295337	-46408	-	BC023000 NM_173804	3486	-	TSC_hg19_v1_chr19_-_55767132 AK297152	29981	-	TSC_hg19_v1_chr19_-_55769905 BC094753	32729	-	BC111715|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##BC111716|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##D15049|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##AK097257|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##NM_001161440|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##NM_002842|PTPRH|5794|protein tyrosine phosphatase, receptor type, H##AK125182|SYT5|6861|synaptotagmin V##AK313067|SYT5|6861|synaptotagmin V##BC033683|SYT5|6861|synaptotagmin V##BC046157|SYT5|6861|synaptotagmin V##BC029962|SYT5|6861|synaptotagmin V##NM_003180|SYT5|6861|synaptotagmin V##AK295337|SYT5|6861|synaptotagmin V##BC023000|TMEM86B|255043|transmembrane protein 86B##NM_173804|TMEM86B|255043|transmembrane protein 86B##AK297152|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1##BC094753|PPP6R1|22870|protein phosphatase 6, regulatory subunit 1	0.0	
chr3	159754243	159754323	reg1040815.p1	3.604	+	NM_000882 BC035571 BC104982 BC104984 M65291 M65271 AF180562 AB528728 AF101062	-47551	+	TSC_hg19_v1_chr3_+_159557745 BC005947 CU675205	-196424	+	NM_001197109 AK091871 TSC_hg19_v1_chr3_+_159557738	-196590	+	TSC_hg19_v1_chr3_+_159943306 NM_001168214	189054	+	BC031660 TSC_hg19_v1_chr3_+_159943777	189420	+	AB037795 NM_001190242	347215	-	NM_000882|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC035571|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104982|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC104984|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65291|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##M65271|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF180562|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##AF101062|IL12A|3592|interleukin 12A (natural killer cell stimulatory factor 1, cytotoxic lymphocyte maturation factor 1, p35)##BC005947|SCHIP1|29970|schwannomin interacting protein 1##NM_001197109|SCHIP1|29970|schwannomin interacting protein 1##AK091871|SCHIP1|29970|schwannomin interacting protein 1##NM_001168214|C3orf80|401097|chromosome 3 open reading frame 80##BC031660|C3orf80|401097|chromosome 3 open reading frame 80##AB037795|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)##NM_001190242|IFT80|57560|intraflagellar transport 80 homolog (Chlamydomonas)	0.043781	
chr3	165572477	165572645	reg1041228.p1	3.604	+	NM_000055 TSC_hg19_v1_chr3_-_165555283	-17294	-	M16474 BC018141 BC008396 TSC_hg19_v1_chr3_-_165555212 AK292063 M16541	-17368	-	BC114621 AB020655 NM_014926 TSC_hg19_v1_chr3_-_164914563	-658056	-	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	1525516	-	AK226025 AB006423 NM_006217 AK293391	1619259	-	BC035512 NM_178824	1798727	-	NM_000055|BCHE|590|butyrylcholinesterase##M16474|BCHE|590|butyrylcholinesterase##BC018141|BCHE|590|butyrylcholinesterase##BC008396|BCHE|590|butyrylcholinesterase##AK292063|BCHE|590|butyrylcholinesterase##M16541|BCHE|590|butyrylcholinesterase##BC114621|SLITRK3|22865|SLIT and NTRK-like family, member 3##AB020655|SLITRK3|22865|SLIT and NTRK-like family, member 3##NM_014926|SLITRK3|22865|SLIT and NTRK-like family, member 3##AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing##AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##BC035512|WDR49|151790|WD repeat domain 49##NM_178824|WDR49|151790|WD repeat domain 49	0.997988	CTCF.p2:8:0.998
chr3	179066453	179066539	reg1033679.p2	3.604	+	BC040557 NM_033540 TSC_hg19_v1_chr3_+_179065522 BC020661 AB043589 AK000700 AK314306	-982	+	AB097862 AF003924 NM_016331	-24946	+	TSC_hg19_v1_chr3_+_179040818 BC026181	-25630	+	BC000873 TSC_hg19_v1_chr3_-_179169227 AK297174	102748	-	TSC_hg19_v1_chr3_-_179169361 AK001890 NM_021629	102869	-	TSC_hg19_v1_chr3_+_179280713 AB060168 NM_004301 NM_177989 NM_178042 AK098691 BC000949 AL136608 BC036371	214213	+	BC040557|MFN1|55669|mitofusin 1##NM_033540|MFN1|55669|mitofusin 1##BC020661|MFN1|55669|mitofusin 1##AB043589|MFN1|55669|mitofusin 1##AK000700|MFN1|55669|mitofusin 1##AK314306|MFN1|55669|mitofusin 1##AB097862|ZNF639|51193|zinc finger protein 639##AF003924|ZNF639|51193|zinc finger protein 639##NM_016331|ZNF639|51193|zinc finger protein 639##BC026181|ZNF639|51193|zinc finger protein 639##BC000873|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AK297174|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AK001890|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##NM_021629|GNB4|59345|guanine nucleotide binding protein (G protein), beta polypeptide 4##AB060168|ACTL6A|86|actin-like 6A##NM_004301|ACTL6A|86|actin-like 6A##NM_177989|ACTL6A|86|actin-like 6A##NM_178042|ACTL6A|86|actin-like 6A##AK098691|ACTL6A|86|actin-like 6A##BC000949|ACTL6A|86|actin-like 6A##AL136608|ACTL6A|86|actin-like 6A##BC036371|ACTL6A|86|actin-like 6A	0.0	
chr3	39447892	39448005	reg1042100.p1	3.604	+	TSC_hg19_v1_chr3_+_39424860 NM_017875 AK000558 AK225388 BC013194 CR457242	-22958	+	AK314957 NM_005201 AF005210 BC107152 BC107159 D49919 BC074743	-76703	+	TSC_hg19_v1_chr3_-_39323217 AB464486 NM_001171174	-124741	-	BC070263 NM_002295 TSC_hg19_v1_chr3_+_39448210 BC066941 BC107567 BC005391 BC062714 D28372 AF503367 BC013827 BC050688 X15005 BC034537 BC053370 BC071968 BC010418 BC071693 BC018867 BC071969 BC073863	262	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	1194	+	NM_182935 BC075796 AK127034 AK290187 BC022471	61171	+	NM_017875|SLC25A38|54977|solute carrier family 25, member 38##AK000558|SLC25A38|54977|solute carrier family 25, member 38##AK225388|SLC25A38|54977|solute carrier family 25, member 38##BC013194|SLC25A38|54977|solute carrier family 25, member 38##CR457242|SLC25A38|54977|solute carrier family 25, member 38##AK314957|CCR8|1237|chemokine (C-C motif) receptor 8##NM_005201|CCR8|1237|chemokine (C-C motif) receptor 8##AF005210|CCR8|1237|chemokine (C-C motif) receptor 8##BC107152|CCR8|1237|chemokine (C-C motif) receptor 8##BC107159|CCR8|1237|chemokine (C-C motif) receptor 8##D49919|CCR8|1237|chemokine (C-C motif) receptor 8##BC074743|CCR8|1237|chemokine (C-C motif) receptor 8##NM_001171174|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC070263|RPSA|3921|ribosomal protein SA##NM_002295|RPSA|3921|ribosomal protein SA##BC066941|RPSA|3921|ribosomal protein SA##BC107567|RPSA|3921|ribosomal protein SA##BC005391|RPSA|3921|ribosomal protein SA##BC062714|RPSA|3921|ribosomal protein SA##AF503367|RPSA|3921|ribosomal protein SA##BC013827|RPSA|3921|ribosomal protein SA##BC050688|RPSA|3921|ribosomal protein SA##X15005|RPSA|3921|ribosomal protein SA##BC034537|RPSA|3921|ribosomal protein SA##BC053370|RPSA|3921|ribosomal protein SA##BC071968|RPSA|3921|ribosomal protein SA##BC010418|RPSA|3921|ribosomal protein SA##BC071693|RPSA|3921|ribosomal protein SA##BC018867|RPSA|3921|ribosomal protein SA##BC071969|RPSA|3921|ribosomal protein SA##BC073863|RPSA|3921|ribosomal protein SA##BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA##NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein	0.0	
chr3	57838789	57838870	reg1029970.p2	3.604	+	AY358410 NM_007159 AK124200 BC114627 BC115701 AB587554	-95627	+	TSC_hg19_v1_chr3_-_57678799 AB385262 AK074156 BC040291 NM_152678	-160090	-	TSC_hg19_v1_chr3_-_57583171 NM_001660	-255639	-	TSC_hg19_v1_chr3_+_57994148 AF043045 NM_001164317 NM_001164318 NM_001164319 NM_001457 AB371580 AB191258 AB371581 AB371582 AF042166	155318	+	NM_004944	361568	-	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	384454	+	AY358410|SLMAP|7871|sarcolemma associated protein##NM_007159|SLMAP|7871|sarcolemma associated protein##AK124200|SLMAP|7871|sarcolemma associated protein##BC114627|SLMAP|7871|sarcolemma associated protein##BC115701|SLMAP|7871|sarcolemma associated protein##AK074156|FAM116A|201627|family with sequence similarity 116, member A##BC040291|FAM116A|201627|family with sequence similarity 116, member A##NM_152678|FAM116A|201627|family with sequence similarity 116, member A##NM_001660|ARF4|378|ADP-ribosylation factor 4##AF043045|FLNB|2317|filamin B, beta##NM_001164317|FLNB|2317|filamin B, beta##NM_001164318|FLNB|2317|filamin B, beta##NM_001164319|FLNB|2317|filamin B, beta##NM_001457|FLNB|2317|filamin B, beta##AB371580|FLNB|2317|filamin B, beta##AB191258|FLNB|2317|filamin B, beta##AB371581|FLNB|2317|filamin B, beta##AB371582|FLNB|2317|filamin B, beta##AF042166|FLNB|2317|filamin B, beta##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6	0.490994	CTCF.p2:-4:0.491
chr4	168143237	168143314	reg1033935.p1	3.604	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-1348821	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-1843118	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-1894420	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	12336	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	12429	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	12465	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.0	
chr10	113962778	113962923	reg1036038.p1	3.603	+	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	-19345	-	AB046780 TSC_hg19_v1_chr10_-_113933602	-29289	-	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	-1125998	+	BC113497 BC113499 AF312827 HQ258194 NM_058222	80602	+	AK000339 TSC_hg19_v1_chr10_+_114133781	170928	+	TSC_hg19_v1_chr10_+_114133873 NM_203379	171053	+	AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta##AK000339|ACSL5|51703|acyl-CoA synthetase long-chain family member 5##NM_203379|ACSL5|51703|acyl-CoA synthetase long-chain family member 5	0.0	
chr10	116298541	116298671	reg1034455.p2	3.603	+	TSC_hg19_v1_chr10_-_116286673 CR749819 NM_006720 AK098277	-11927	-	TSC_hg19_v1_chr10_-_116286631 AK298709 BC002448	-12004	-	CU677968 TSC_hg19_v1_chr10_-_116251632	-46999	-	AK297344 TSC_hg19_v1_chr10_-_116392101	93494	-	AF005654 NM_002313	119450	-	AB462929 TSC_hg19_v1_chr10_-_116444183 D31883	145557	-	CR749819|ABLIM1|3983|actin binding LIM protein 1##NM_006720|ABLIM1|3983|actin binding LIM protein 1##AK098277|ABLIM1|3983|actin binding LIM protein 1##AK298709|ABLIM1|3983|actin binding LIM protein 1##BC002448|ABLIM1|3983|actin binding LIM protein 1##AK297344|ABLIM1|3983|actin binding LIM protein 1##AF005654|ABLIM1|3983|actin binding LIM protein 1##NM_002313|ABLIM1|3983|actin binding LIM protein 1##D31883|ABLIM1|3983|actin binding LIM protein 1	0.0	
chr10	35250085	35250191	reg1038876.p2	3.603	+	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	-145987	-	TSC_hg19_v1_chr10_-_33623996 BX648025	-1626140	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1626324	-	AK310225 AK300491 NM_001198778 NM_001198779	113074	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	129134	-	TSC_hg19_v1_chr10_-_35379513 BC095405 BC110901 AL832733 AK095217 NM_001198777	129386	-	AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2##BC095405|CUL2|8453|cullin 2##BC110901|CUL2|8453|cullin 2##AL832733|CUL2|8453|cullin 2##AK095217|CUL2|8453|cullin 2##NM_001198777|CUL2|8453|cullin 2	0.011407	
chr10	91403874	91403987	reg1037625.p1	3.603	+	AF355198 AY027662 AY027663 NM_138316 NM_148978	-292	-	CR936657 AK127303 NM_213606	-108619	-	U34605 TSC_hg19_v1_chr10_+_91174502 AK312358 AK293346	-229442	+	TSC_hg19_v1_chr10_-_91404973 AK125428	1013	-	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	1394	-	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	57445	+	AF355198|PANK1|53354|pantothenate kinase 1##AY027662|PANK1|53354|pantothenate kinase 1##AY027663|PANK1|53354|pantothenate kinase 1##NM_138316|PANK1|53354|pantothenate kinase 1##NM_148978|PANK1|53354|pantothenate kinase 1##CR936657|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##AK127303|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##NM_213606|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##U34605|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK312358|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK293346|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK125428|PANK1|53354|pantothenate kinase 1##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B	0.0	
chr1	20484988	20485096	reg1040466.p1	3.603	+	TSC_hg19_v1_chr1_+_20480706 BC041651	-4279	+	AK093645 AX748240 BX647458 NM_022819 AB528809	-19174	+	AB590095 AM392918 AM392954 AM392977 AM393597 AM393824 BC025706 NM_012400 AF112982 AY358606 AK290406 AF188625 AK310156 AK311903 AK301396	-39018	-	NM_001105572	16644	-	BC047428 NM_152376 BX648631 AK058158 TSC_hg19_v1_chr1_+_20512591	27542	+	NM_001039500 AK125833	132378	+	AK093645|PLA2G2F|64600|phospholipase A2, group IIF##BX647458|PLA2G2F|64600|phospholipase A2, group IIF##NM_022819|PLA2G2F|64600|phospholipase A2, group IIF##AM392918|PLA2G2D|26279|phospholipase A2, group IID##AM392954|PLA2G2D|26279|phospholipase A2, group IID##AM392977|PLA2G2D|26279|phospholipase A2, group IID##AM393597|PLA2G2D|26279|phospholipase A2, group IID##AM393824|PLA2G2D|26279|phospholipase A2, group IID##BC025706|PLA2G2D|26279|phospholipase A2, group IID##NM_012400|PLA2G2D|26279|phospholipase A2, group IID##AF112982|PLA2G2D|26279|phospholipase A2, group IID##AY358606|PLA2G2D|26279|phospholipase A2, group IID##AK290406|PLA2G2D|26279|phospholipase A2, group IID##AF188625|PLA2G2D|26279|phospholipase A2, group IID##AK310156|PLA2G2D|26279|phospholipase A2, group IID##AK311903|PLA2G2D|26279|phospholipase A2, group IID##AK301396|PLA2G2D|26279|phospholipase A2, group IID##NM_001105572|PLA2G2C|391013|phospholipase A2, group IIC##BC047428|UBXN10|127733|UBX domain protein 10##NM_152376|UBXN10|127733|UBX domain protein 10##BX648631|UBXN10|127733|UBX domain protein 10##AK058158|UBXN10|127733|UBX domain protein 10##NM_001039500|VWA5B1|127731|von Willebrand factor A domain containing 5B1##AK125833|VWA5B1|127731|von Willebrand factor A domain containing 5B1	0.620004	CTCF.p2:-8:0.302	CTCF.p2:94:0.318
chr12	118808777	118808844	reg1039119.p2	3.603	+	TSC_hg19_v1_chr12_+_118573963 AB528565 X85033	-234832	+	TSC_hg19_v1_chr12_+_118573928 BC008714 AK311927 D16111 BC018799 AK308056 BC031102 AK299414 HM131449	-234887	+	TSC_hg19_v1_chr12_+_118573907 NM_002567 BC017396 X75252 AK226006	-234935	+	AF181985 BC002756 TSC_hg19_v1_chr12_-_118810699 AK289558	1818	-	TSC_hg19_v1_chr12_-_118810713 NM_016281	1920	-	TSC_hg19_v1_chr12_+_118814359 BC098404 NM_022491 BX647687 AK024460 AB464255	5592	+	X85033|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC008714|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK311927|PEBP1|5037|phosphatidylethanolamine binding protein 1##D16111|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC018799|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK308056|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC031102|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK299414|PEBP1|5037|phosphatidylethanolamine binding protein 1##HM131449|PEBP1|5037|phosphatidylethanolamine binding protein 1##NM_002567|PEBP1|5037|phosphatidylethanolamine binding protein 1##BC017396|PEBP1|5037|phosphatidylethanolamine binding protein 1##X75252|PEBP1|5037|phosphatidylethanolamine binding protein 1##AK226006|PEBP1|5037|phosphatidylethanolamine binding protein 1##AF181985|TAOK3|51347|TAO kinase 3##BC002756|TAOK3|51347|TAO kinase 3##AK289558|TAOK3|51347|TAO kinase 3##NM_016281|TAOK3|51347|TAO kinase 3##BC098404|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##NM_022491|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##BX647687|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)##AK024460|SUDS3|64426|suppressor of defective silencing 3 homolog (S. cerevisiae)	0.0	
chr13	30768066	30768177	reg1033048.p2	3.603	+	TSC_hg19_v1_chr13_-_30424811 NM_007106	-343280	-	TSC_hg19_v1_chr13_-_30424719 AK056580	-343419	-	BC059385 BC044582 TSC_hg19_v1_chr13_-_30424481	-343715	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	113030	-	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	113448	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	271872	-	NM_007106|UBL3|5412|ubiquitin-like 3##AK056580|UBL3|5412|ubiquitin-like 3##BC059385|UBL3|5412|ubiquitin-like 3##BC044582|UBL3|5412|ubiquitin-like 3##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1	0.0	
chr14	94987806	94987958	reg1039442.p1	3.603	+	BC040857 NM_173850	-3702	-	AY358700 AY220120 AY220119 AK301082 BC111498 AY220121 AY220118 AY185496 AY185497 NM_001042518 NM_175739	-45291	-	BC146962 BX248259 NM_001080451	-68779	-	TSC_hg19_v1_chr14_+_95027778 AK309586 AK313196 BC014992 NM_006215 BX248760 BX248009	39918	+	NM_000624 TSC_hg19_v1_chr14_+_95047736 AK310869	59851	+	TSC_hg19_v1_chr14_+_95047766 AK298279	59881	+	BC040857|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12##NM_173850|SERPINA12|145264|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12##AY358700|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220120|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220119|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AK301082|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC111498|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220121|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY220118|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185496|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##AY185497|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_001042518|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##NM_175739|SERPINA9|327657|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9##BC146962|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##BX248259|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##NM_001080451|SERPINA11|256394|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 11##AK309586|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##AK313196|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##BC014992|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##NM_006215|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##BX248760|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##BX248009|SERPINA4|5267|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4##NM_000624|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##AK310869|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##AK298279|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5	0.92329	CTCF.p2:0:0.923
chr15	70391690	70391870	reg1033323.p1	3.603	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-1537	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-1553	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-49871	-	TSC_hg19_v1_chr15_-_70878946 BC040579	487164	-	BC016881 AL834243 NM_001008224 AK055435	602847	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	664062	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.0	
chr22	18876840	18876942	reg1039138.p1	3.603	+	TSC_hg19_v1_chr22_+_18632936 AK313385 AL136690 BC014896	-243989	+	TSC_hg19_v1_chr22_+_18632731 NM_017414	-244157	+	TSC_hg19_v1_chr22_+_18593574 AJ245922 CR456600 BC104845 BC074827 AK315316	-283308	+	NM_005675 AF228707 TSC_hg19_v1_chr22_+_18893832 AK315115 BC047039 CR456434 AK098780 AB528122 CU012994 CU013282	16919	+	AB209472 TSC_hg19_v1_chr22_-_18923807 BC068260 BC094736 BC036534	46840	-	BC118597 BC121809 NM_001195226 NM_016335 U79754	47123	-	AK313385|USP18|11274|ubiquitin specific peptidase 18##AL136690|USP18|11274|ubiquitin specific peptidase 18##BC014896|USP18|11274|ubiquitin specific peptidase 18##NM_017414|USP18|11274|ubiquitin specific peptidase 18##AJ245922|TUBA8|51807|tubulin, alpha 8##CR456600|TUBA8|51807|tubulin, alpha 8##BC104845|TUBA8|51807|tubulin, alpha 8##BC074827|TUBA8|51807|tubulin, alpha 8##AK315316|TUBA8|51807|tubulin, alpha 8##NM_005675|DGCR6|8214|DiGeorge syndrome critical region gene 6##AF228707|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK315115|DGCR6|8214|DiGeorge syndrome critical region gene 6##BC047039|DGCR6|8214|DiGeorge syndrome critical region gene 6##CR456434|DGCR6|8214|DiGeorge syndrome critical region gene 6##AK098780|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU012994|DGCR6|8214|DiGeorge syndrome critical region gene 6##CU013282|DGCR6|8214|DiGeorge syndrome critical region gene 6##AB209472|PRODH|5625|proline dehydrogenase (oxidase) 1##BC068260|PRODH|5625|proline dehydrogenase (oxidase) 1##BC094736|PRODH|5625|proline dehydrogenase (oxidase) 1##BC036534|PRODH|5625|proline dehydrogenase (oxidase) 1##BC118597|PRODH|5625|proline dehydrogenase (oxidase) 1##BC121809|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_001195226|PRODH|5625|proline dehydrogenase (oxidase) 1##NM_016335|PRODH|5625|proline dehydrogenase (oxidase) 1##U79754|PRODH|5625|proline dehydrogenase (oxidase) 1	0.0	
chr2	229781161	229781227	reg1041970.p2	3.603	+	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-734832	-	AK097409 NM_178821 BC036377 AK098821 AK301861	-1044842	+	TSC_hg19_v1_chr2_+_228678557 BC020698 NM_001130046 NM_004591 D86955 U64197 DQ891973 DQ896841 AB590447 U77035	-1102603	+	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	354811	-	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	798054	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	1005467	-	HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK097409|WDR69|164781|WD repeat domain 69##NM_178821|WDR69|164781|WD repeat domain 69##BC036377|WDR69|164781|WD repeat domain 69##AK098821|WDR69|164781|WD repeat domain 69##AK301861|WDR69|164781|WD repeat domain 69##BC020698|CCL20|6364|chemokine (C-C motif) ligand 20##NM_001130046|CCL20|6364|chemokine (C-C motif) ligand 20##NM_004591|CCL20|6364|chemokine (C-C motif) ligand 20##D86955|CCL20|6364|chemokine (C-C motif) ligand 20##U64197|CCL20|6364|chemokine (C-C motif) ligand 20##DQ891973|CCL20|6364|chemokine (C-C motif) ligand 20##DQ896841|CCL20|6364|chemokine (C-C motif) ligand 20##U77035|CCL20|6364|chemokine (C-C motif) ligand 20##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12	0.0	
chr2	240197101	240197187	reg1031383.p2	3.603	+	BC033168 NM_057179 BC103755 BC017907 AB528459 CU689614	-440381	+	TSC_hg19_v1_chr2_+_239335693 AF156777	-861455	+	TSC_hg19_v1_chr2_+_239335644 BC014528 NM_001040445	-861538	+	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	125504	-	TSC_hg19_v1_chr2_-_240322695 BC039904	125554	-	TSC_hg19_v1_chr2_-_240323341 AK308791	126204	-	BC033168|TWIST2|117581|twist homolog 2 (Drosophila)##NM_057179|TWIST2|117581|twist homolog 2 (Drosophila)##BC103755|TWIST2|117581|twist homolog 2 (Drosophila)##BC017907|TWIST2|117581|twist homolog 2 (Drosophila)##AF156777|ASB1|51665|ankyrin repeat and SOCS box containing 1##BC014528|ASB1|51665|ankyrin repeat and SOCS box containing 1##NM_001040445|ASB1|51665|ankyrin repeat and SOCS box containing 1##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AK308791|HDAC4|9759|histone deacetylase 4	0.0	
chr3	124066348	124066492	reg1042724.p2	3.603	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-252815	+	AF303889 NM_017578	-356222	-	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	-386165	-	TSC_hg19_v1_chr3_+_124103674 AK131379	37203	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	237108	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	382819	+	AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14##AK131379|KALRN|8997|kalirin, RhoGEF kinase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase	0.928727	CTCF.p2:41:0.929
chr4	78520688	78520795	reg1042501.p1	3.603	+	AF044197 NM_006419	-87836	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-441248	+	TSC_hg19_v1_chr4_+_78078398 U47414	-442281	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	219803	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	263173	+	NM_001166133 NM_025074 TSC_hg19_v1_chr4_+_78978757 AK096838	457999	+	AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1##NM_001166133|FRAS1|80144|Fraser syndrome 1##NM_025074|FRAS1|80144|Fraser syndrome 1##AK096838|FRAS1|80144|Fraser syndrome 1	0.043888	
chr5	32523938	32524069	reg1044207.p1	3.603	+	TSC_hg19_v1_chr5_-_32444845 AK292214 AK309638 BC017879 NM_016107	-79067	-	TSC_hg19_v1_chr5_-_32444820 BC107417 AJ314790 BC030540 BC137084 BC137085	-79225	-	TSC_hg19_v1_chr5_-_32403324 BC062986 BC051893	-120650	-	NM_006713 TSC_hg19_v1_chr5_+_32585676 AK294124 AK311754 BC022339 AK307268 BC009610 BC018189 BC071655 BC063402 BC010537 BC105972 AB209285	61653	+	NM_001204376 AK300094 AK308301	186747	+	AK290870 NM_000908 NM_001204375 M59305	187485	+	AK292214|ZFR|51663|zinc finger RNA binding protein##AK309638|ZFR|51663|zinc finger RNA binding protein##BC017879|ZFR|51663|zinc finger RNA binding protein##NM_016107|ZFR|51663|zinc finger RNA binding protein##BC107417|ZFR|51663|zinc finger RNA binding protein##AJ314790|ZFR|51663|zinc finger RNA binding protein##BC030540|ZFR|51663|zinc finger RNA binding protein##BC137084|ZFR|51663|zinc finger RNA binding protein##BC137085|ZFR|51663|zinc finger RNA binding protein##BC062986|ZFR|51663|zinc finger RNA binding protein##BC051893|ZFR|51663|zinc finger RNA binding protein##NM_006713|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK294124|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK311754|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC022339|SUB1|10923|SUB1 homolog (S. cerevisiae)##AK307268|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC009610|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC018189|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC071655|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC063402|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC010537|SUB1|10923|SUB1 homolog (S. cerevisiae)##BC105972|SUB1|10923|SUB1 homolog (S. cerevisiae)##AB209285|SUB1|10923|SUB1 homolog (S. cerevisiae)##NM_001204376|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK300094|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK308301|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AK290870|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_000908|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##NM_001204375|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##M59305|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)	0.0	
chr6	3389044	3389207	reg1035526.p2	3.603	+	TSC_hg19_v1_chr6_-_3272352 BC090851 BC022217	-116695	-	TSC_hg19_v1_chr6_+_3259232 AK126623 AK095683	-129886	+	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	-129967	+	BC128580 BC128581 BC038748 NM_021945	56082	-	TSC_hg19_v1_chr6_-_3456513 AL110245	67389	-	BC040876 NM_015482	67638	-	BC090851|SLC22A23|63027|solute carrier family 22, member 23##BC022217|SLC22A23|63027|solute carrier family 22, member 23##AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##BC128580|SLC22A23|63027|solute carrier family 22, member 23##BC128581|SLC22A23|63027|solute carrier family 22, member 23##BC038748|SLC22A23|63027|solute carrier family 22, member 23##NM_021945|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23	0.0	
chr8	103899310	103899449	reg1041736.p2	3.603	+	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	-22984	-	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	-23020	-	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	-231447	-	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	133888	+	TSC_hg19_v1_chr8_+_104033310 AK308632 BC010960 X69151 AK000064	133941	+	TSC_hg19_v1_chr8_+_104152984 NM_001024372 NM_024812 BC035038 AK022077 BC011517 AK093819 AF371319 AF371323 DQ893318 DQ896633	253621	+	BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1##AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK308632|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BC010960|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##X69151|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK000064|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##NM_001024372|BAALC|79870|brain and acute leukemia, cytoplasmic##NM_024812|BAALC|79870|brain and acute leukemia, cytoplasmic##BC035038|BAALC|79870|brain and acute leukemia, cytoplasmic##AK022077|BAALC|79870|brain and acute leukemia, cytoplasmic##BC011517|BAALC|79870|brain and acute leukemia, cytoplasmic##AK093819|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371319|BAALC|79870|brain and acute leukemia, cytoplasmic##AF371323|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ893318|BAALC|79870|brain and acute leukemia, cytoplasmic##DQ896633|BAALC|79870|brain and acute leukemia, cytoplasmic	0.0	
chr8	64162818	64162904	reg1029706.p2	3.603	+	TSC_hg19_v1_chr8_+_64081201 AL831816 AK056219 BC037492 AL832335	-81661	+	TSC_hg19_v1_chr8_+_64081179 NM_152758 BC052970 AK127574 AL832005 BX537996	-81717	+	CU691280 U21938 TSC_hg19_v1_chr8_-_63998613 BC041784 D49488 BC058000 NM_000370	-164234	-	NM_152414 AK293979	1329997	+	TSC_hg19_v1_chr8_+_65493611 AK091333	1330803	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	1548418	-	AL831816|YTHDF3|253943|YTH domain family, member 3##AK056219|YTHDF3|253943|YTH domain family, member 3##BC037492|YTHDF3|253943|YTH domain family, member 3##AL832335|YTHDF3|253943|YTH domain family, member 3##NM_152758|YTHDF3|253943|YTH domain family, member 3##BC052970|YTHDF3|253943|YTH domain family, member 3##AK127574|YTHDF3|253943|YTH domain family, member 3##AL832005|YTHDF3|253943|YTH domain family, member 3##BX537996|YTHDF3|253943|YTH domain family, member 3##U21938|TTPA|7274|tocopherol (alpha) transfer protein##BC041784|TTPA|7274|tocopherol (alpha) transfer protein##D49488|TTPA|7274|tocopherol (alpha) transfer protein##BC058000|TTPA|7274|tocopherol (alpha) transfer protein##NM_000370|TTPA|7274|tocopherol (alpha) transfer protein##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1	0.875269	CTCF.p2:-21:0.875
chrX	148738086	148738195	reg1025527.p1	3.603	+	AK097391 AK096308 AK297335 TSC_hg19_v1_chrX_-_148713449 NM_001174092 NM_032508 AF530473	-24657	-	TSC_hg19_v1_chrX_-_148713302 BC103820 BC103821 BC103822	-24841	-	NM_001164415 NM_016153	-61167	-	AK127849 NM_001011544	31762	+	NM_005366 AY747607 BC004479	55629	+	NM_001164415 NM_016153	117585	+	AK097391|TMEM185A|84548|transmembrane protein 185A##AK096308|TMEM185A|84548|transmembrane protein 185A##AK297335|TMEM185A|84548|transmembrane protein 185A##NM_001174092|TMEM185A|84548|transmembrane protein 185A##NM_032508|TMEM185A|84548|transmembrane protein 185A##AF530473|TMEM185A|84548|transmembrane protein 185A##BC103820|TMEM185A|84548|transmembrane protein 185A##BC103821|TMEM185A|84548|transmembrane protein 185A##BC103822|TMEM185A|84548|transmembrane protein 185A##NM_001164415|HSFX2|100130086|heat shock transcription factor family, X linked 2##NM_016153|HSFX1|100506164|heat shock transcription factor family, X linked 1##AK127849|MAGEA11|4110|melanoma antigen family A, 11##NM_001011544|MAGEA11|4110|melanoma antigen family A, 11##NM_005366|MAGEA11|4110|melanoma antigen family A, 11##AY747607|MAGEA11|4110|melanoma antigen family A, 11##BC004479|MAGEA11|4110|melanoma antigen family A, 11##NM_001164415|HSFX2|100130086|heat shock transcription factor family, X linked 2##NM_016153|HSFX1|100506164|heat shock transcription factor family, X linked 1	0.038694	
chr10	12175728	12175876	reg1046675.p2	3.602	+	TSC_hg19_v1_chr10_+_12171686 NM_001142627 NM_001142628 NM_018144 AK301841 AK292295 BC026179 AF346603 AK057532 AK022640	-4149	+	TSC_hg19_v1_chr10_+_12110968 BC002477 BC007955 AB046850 AK309810 CU675875	-64795	+	TSC_hg19_v1_chr10_+_12110952 NM_018706	-64866	+	TSC_hg19_v1_chr10_-_12237861 AF218818 AK291131 AF155832 AF161464	62064	-	TSC_hg19_v1_chr10_+_12237965 NM_006023 D14878 AK225634	62159	+	BC000025 TSC_hg19_v1_chr10_-_12238092 AK314144 NM_014142	62306	-	NM_001142627|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##NM_001142628|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##NM_018144|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AK301841|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AK292295|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##BC026179|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AF346603|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AK057532|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##AK022640|SEC61A2|55176|Sec61 alpha 2 subunit (S. cerevisiae)##BC002477|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1##BC007955|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1##AK309810|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1##NM_018706|DHTKD1|55526|dehydrogenase E1 and transketolase domain containing 1##AF218818|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5##AK291131|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5##AF155832|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5##AF161464|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5##NM_006023|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##D14878|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK225634|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##BC000025|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5##AK314144|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5##NM_014142|NUDT5|11164|nudix (nucleoside diphosphate linked moiety X)-type motif 5	0.0	
chr12	122651313	122651434	reg1035976.p2	3.602	+	BC069272 TSC_hg19_v1_chr12_+_122614551	-36853	+	TSC_hg19_v1_chr12_+_122516682 AF312918	-134656	+	TSC_hg19_v1_chr12_+_122516655 BC151841 NM_014938	-134766	+	AK124107 NM_152759	892	+	AB590927 BC132998 BC133000 AY499343 NM_001014336	7361	-	TSC_hg19_v1_chr12_+_122667676 NM_001098519	16301	+	BC069272|MLXIP|22877|MLX interacting protein##AF312918|MLXIP|22877|MLX interacting protein##BC151841|MLXIP|22877|MLX interacting protein##NM_014938|MLXIP|22877|MLX interacting protein##AK124107|LRRC43|254050|leucine rich repeat containing 43##NM_152759|LRRC43|254050|leucine rich repeat containing 43##BC132998|IL31|386653|interleukin 31##BC133000|IL31|386653|interleukin 31##AY499343|IL31|386653|interleukin 31##NM_001014336|IL31|386653|interleukin 31##NM_001098519|LRRC43|254050|leucine rich repeat containing 43	0.0	
chr13	40176773	40176894	reg1033875.p2	3.602	+	TSC_hg19_v1_chr13_+_39612534 AL833329 NM_001012754 NM_001017370 BX648122 BC052492 BC140877 BC140878 CR749318 AK300260 AK299198 BX647872	-564298	+	TSC_hg19_v1_chr13_-_39612251 NM_025138 NM_170719	-564580	-	TSC_hg19_v1_chr13_-_39612201 AK074360 AB107354	-564632	-	AF098807 BC017824 TSC_hg19_v1_chr13_-_40177268	411	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	494	-	NM_005780 TSC_hg19_v1_chr13_-_40177356	529	-	AL833329|NHLRC3|387921|NHL repeat containing 3##NM_001012754|NHLRC3|387921|NHL repeat containing 3##NM_001017370|NHLRC3|387921|NHL repeat containing 3##BX648122|NHLRC3|387921|NHL repeat containing 3##BC052492|NHLRC3|387921|NHL repeat containing 3##BC140877|NHLRC3|387921|NHL repeat containing 3##BC140878|NHLRC3|387921|NHL repeat containing 3##CR749318|NHLRC3|387921|NHL repeat containing 3##AK300260|NHLRC3|387921|NHL repeat containing 3##AK299198|NHLRC3|387921|NHL repeat containing 3##BX647872|NHLRC3|387921|NHL repeat containing 3##NM_025138|PROSER1|80209|proline and serine rich 1##NM_170719|PROSER1|80209|proline and serine rich 1##AK074360|PROSER1|80209|proline and serine rich 1##AB107354|PROSER1|80209|proline and serine rich 1##AF098807|LHFP|10186|lipoma HMGIC fusion partner##BC017824|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##NM_005780|LHFP|10186|lipoma HMGIC fusion partner	0.461362	CTCF.p2:16:0.461
chr15	66161843	66161954	reg1035461.p2	3.602	+	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	-51	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-77305	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	-77425	-	TSC_hg19_v1_chr15_-_66321664 AK054827	159795	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	384179	-	NM_133375 AK295392 BC022089	423747	+	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	0.0	
chr19	35685067	35685155	reg1031390.p1	3.602	+	BC009642 TSC_hg19_v1_chr19_+_35646116	-39028	+	TSC_hg19_v1_chr19_+_35645641 AB072911 BC013834 NM_144779 AY358991 BC018798 AF161462 NM_001164605	-39369	+	TSC_hg19_v1_chr19_+_35645637 NM_014164 AK304012	-39485	+	BC039080 HQ258231 AK098526 NM_152481 BC117457 BC117459	34493	-	TSC_hg19_v1_chr19_+_35739294 AK126834	54180	+	TSC_hg19_v1_chr19_+_35739638 NM_015925 NM_205834 NM_205835 BC047376	54503	+	BC009642|FXYD5|53827|FXYD domain containing ion transport regulator 5##AB072911|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC013834|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_144779|FXYD5|53827|FXYD domain containing ion transport regulator 5##AY358991|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC018798|FXYD5|53827|FXYD domain containing ion transport regulator 5##AF161462|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_001164605|FXYD5|53827|FXYD domain containing ion transport regulator 5##NM_014164|FXYD5|53827|FXYD domain containing ion transport regulator 5##AK304012|FXYD5|53827|FXYD domain containing ion transport regulator 5##BC039080|FAM187B|148109|family with sequence similarity 187, member B##HQ258231|FAM187B|148109|family with sequence similarity 187, member B##AK098526|FAM187B|148109|family with sequence similarity 187, member B##NM_152481|FAM187B|148109|family with sequence similarity 187, member B##BC117457|FAM187B|148109|family with sequence similarity 187, member B##BC117459|FAM187B|148109|family with sequence similarity 187, member B##AK126834|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_015925|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_205834|LSR|51599|lipolysis stimulated lipoprotein receptor##NM_205835|LSR|51599|lipolysis stimulated lipoprotein receptor##BC047376|LSR|51599|lipolysis stimulated lipoprotein receptor	0.32147	CTCF.p2:-6:0.321
chr2	146805856	146805967	reg1041728.p1	3.602	+	AB011141 BC025696 AB056507 BC025730 TSC_hg19_v1_chr2_-_145277942 NM_001171653 NM_014795	-1527990	-	BC127102 BC127101 TSC_hg19_v1_chr2_-_145277687 BC037975 AK294928 BC060819	-1528280	-	TSC_hg19_v1_chr2_-_145275089 BC070275 AK308445 BC035706	-1530708	-	TSC_hg19_v1_chr2_+_148602085 AK301629 M93415	1796206	+	TSC_hg19_v1_chr2_+_148602300 AK314124	1796424	+	BC069707 NM_001616 D31770 X62381 BC067416 BC067417 BC067418 X63128 AB529011 CU686984 CU688290	1796734	+	AB011141|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025696|ZEB2|9839|zinc finger E-box binding homeobox 2##AB056507|ZEB2|9839|zinc finger E-box binding homeobox 2##BC025730|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_001171653|ZEB2|9839|zinc finger E-box binding homeobox 2##NM_014795|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127102|ZEB2|9839|zinc finger E-box binding homeobox 2##BC127101|ZEB2|9839|zinc finger E-box binding homeobox 2##BC037975|ZEB2|9839|zinc finger E-box binding homeobox 2##AK294928|ZEB2|9839|zinc finger E-box binding homeobox 2##BC060819|ZEB2|9839|zinc finger E-box binding homeobox 2##AK308445|ZEB2|9839|zinc finger E-box binding homeobox 2##BC035706|ZEB2|9839|zinc finger E-box binding homeobox 2##AK301629|ACVR2A|92|activin A receptor, type IIA##M93415|ACVR2A|92|activin A receptor, type IIA##AK314124|ACVR2A|92|activin A receptor, type IIA##BC069707|ACVR2A|92|activin A receptor, type IIA##NM_001616|ACVR2A|92|activin A receptor, type IIA##D31770|ACVR2A|92|activin A receptor, type IIA##X62381|ACVR2A|92|activin A receptor, type IIA##BC067416|ACVR2A|92|activin A receptor, type IIA##BC067417|ACVR2A|92|activin A receptor, type IIA##BC067418|ACVR2A|92|activin A receptor, type IIA##X63128|ACVR2A|92|activin A receptor, type IIA	0.067606	
chr3	107471594	107471725	reg1040918.p1	3.602	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-229810	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-375349	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-512067	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	338214	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	469633	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	543742	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.03255	
chr3	27526200	27526348	reg1046210.p1	3.602	+	TSC_hg19_v1_chr3_-_27525893 AK309734	-344	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	-449	-	AF047033 AF089726 NM_003615	-28030	-	AB031038 BC131712 NM_005442 AB463608 BC037568	237519	-	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	237927	-	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	756824	+	AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)	0.0	
chr4	88769898	88770011	reg1021094.p1	3.602	+	AK307774 NM_001184695 NM_001184696 NM_001184697 NM_020203 AJ276396 BC128158 AF325916	-15825	+	AK075076 NM_001184694	-27399	+	NM_004967 TSC_hg19_v1_chr4_+_88720705 J05213	-49233	+	NM_000582 NM_001040058 NM_001040060 NM_001251829 NM_001251830 TSC_hg19_v1_chr4_+_88896809 JF412667 BC093033	126856	+	TSC_hg19_v1_chr4_+_88896865 BX648003 J04765 AK057738 AK075463 AK290090 AK296035 BC007016 BC017387 BC022844 AK295491	126898	+	TSC_hg19_v1_chr4_+_88896868 AK290104 M83248 AK315461 AF052124	126925	+	AK307774|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184695|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184696|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184697|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_020203|MEPE|56955|matrix extracellular phosphoglycoprotein##AJ276396|MEPE|56955|matrix extracellular phosphoglycoprotein##BC128158|MEPE|56955|matrix extracellular phosphoglycoprotein##AF325916|MEPE|56955|matrix extracellular phosphoglycoprotein##AK075076|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_001184694|MEPE|56955|matrix extracellular phosphoglycoprotein##NM_004967|IBSP|3381|integrin-binding sialoprotein##J05213|IBSP|3381|integrin-binding sialoprotein##NM_000582|SPP1|6696|secreted phosphoprotein 1##NM_001040058|SPP1|6696|secreted phosphoprotein 1##NM_001040060|SPP1|6696|secreted phosphoprotein 1##NM_001251829|SPP1|6696|secreted phosphoprotein 1##NM_001251830|SPP1|6696|secreted phosphoprotein 1##JF412667|SPP1|6696|secreted phosphoprotein 1##BC093033|SPP1|6696|secreted phosphoprotein 1##BX648003|SPP1|6696|secreted phosphoprotein 1##J04765|SPP1|6696|secreted phosphoprotein 1##AK057738|SPP1|6696|secreted phosphoprotein 1##AK075463|SPP1|6696|secreted phosphoprotein 1##AK290090|SPP1|6696|secreted phosphoprotein 1##AK296035|SPP1|6696|secreted phosphoprotein 1##BC007016|SPP1|6696|secreted phosphoprotein 1##BC017387|SPP1|6696|secreted phosphoprotein 1##BC022844|SPP1|6696|secreted phosphoprotein 1##AK295491|SPP1|6696|secreted phosphoprotein 1##AK290104|SPP1|6696|secreted phosphoprotein 1##M83248|SPP1|6696|secreted phosphoprotein 1##AK315461|SPP1|6696|secreted phosphoprotein 1##AF052124|SPP1|6696|secreted phosphoprotein 1	0.206379	CTCF.p2:-11:0.206
chr5	118406414	118406518	reg1035206.p2	3.602	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	-82228	-	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-2495952	-	TSC_hg19_v1_chr5_+_115898220 D28352	-2508242	+	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	345	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	699	+	NM_001077654 TSC_hg19_v1_chr5_+_118604492 AK097884 AK001931	197992	+	BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1##NM_001077654|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK097884|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001931|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8	0.0	
chr7	2111885	2111978	reg1026426.p2	3.602	+	TSC_hg19_v1_chr7_-_1980177 BC018870	-131768	-	NM_001128636	-363134	+	TSC_hg19_v1_chr7_+_1609777 BX538028 BC036405 BC047649	-502110	+	AK310481 TSC_hg19_v1_chr7_-_2272542	160604	-	TSC_hg19_v1_chr7_-_2272559 AF083811	160629	-	TSC_hg19_v1_chr7_-_2272581 AK090959 AK310831 AK314227 AX746704 NM_001013836 NM_001013837 NM_003550	160649	-	BC018870|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001128636|ELFN1|392617|extracellular leucine-rich repeat and fibronectin type III domain containing 1##BX538028|KIAA1908|114796|uncharacterized LOC114796##BC036405|KIAA1908|114796|uncharacterized LOC114796##BC047649|KIAA1908|114796|uncharacterized LOC114796##AK310481|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AF083811|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK090959|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK310831|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##AK314227|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013836|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_001013837|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)##NM_003550|MAD1L1|8379|MAD1 mitotic arrest deficient-like 1 (yeast)	0.0	
chr7	66459828	66459914	reg1044897.p1	3.602	+	TSC_hg19_v1_chr7_+_66386238 BC010519	-73600	+	TSC_hg19_v1_chr7_+_66386228 BC041764	-73640	+	TSC_hg19_v1_chr7_+_66386215 AK222774 NM_017994 BC012562 AK000961 BC008675	-73695	+	CU688080 TSC_hg19_v1_chr7_-_66460574 BC065700 AF151855 AK001779 AY169963 NM_016038 AK289609	629	-	TSC_hg19_v1_chr7_+_66461858 BC042156 NM_018264 AK001762 BC015591 BC051888	1987	+	TSC_hg19_v1_chr7_-_66767458 BC029419 D38438 D38500 BC029368 BC038841 BC056507	307557	-	BC010519|C7orf42|55069|chromosome 7 open reading frame 42##BC041764|C7orf42|55069|chromosome 7 open reading frame 42##AK222774|C7orf42|55069|chromosome 7 open reading frame 42##NM_017994|C7orf42|55069|chromosome 7 open reading frame 42##BC012562|C7orf42|55069|chromosome 7 open reading frame 42##AK000961|C7orf42|55069|chromosome 7 open reading frame 42##BC008675|C7orf42|55069|chromosome 7 open reading frame 42##BC065700|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AF151855|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AK001779|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AY169963|SBDS|51119|Shwachman-Bodian-Diamond syndrome##NM_016038|SBDS|51119|Shwachman-Bodian-Diamond syndrome##AK289609|SBDS|51119|Shwachman-Bodian-Diamond syndrome##BC042156|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##NM_018264|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##AK001762|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##BC015591|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##BC051888|TYW1|55253|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)##BC029419|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##D38438|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##D38500|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##BC029368|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4##BC038841|PMS2P4|5382|postmeiotic segregation increased 2 pseudogene 4	0.184967	
chr8	82693029	82693210	reg1007977.p2	3.602	+	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-48360	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-59593	-	AY825924 NM_001010893 BC136625 BC136631	-85873	-	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	61354	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	2402340	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	2402424	+	BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##AY825924|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##NM_001010893|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136625|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##BC136631|SLC10A5|347051|solute carrier family 10 (sodium/bile acid cotransporter family), member 5##AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like	0.187729	
chr8	96249516	96249627	reg1044159.p1	3.602	+	TSC_hg19_v1_chr8_+_96146116 AK023249	-103435	+	TSC_hg19_v1_chr8_+_96146012 AL834473 BC011806	-103563	+	TSC_hg19_v1_chr8_+_96145948 NM_024613	-103626	+	TSC_hg19_v1_chr8_+_96281043 GU295153 GU295154 GU295155 GU295156 GU295157 GU295158 GU295159 GU295160 GU295161 GU295162 GU295163	31480	+	TSC_hg19_v1_chr8_-_96281430 BC036855 BC150301 AK055162 GQ240139 NM_177965	31894	-	BC127948 BC127947 AJ537424 NM_001001557	923410	-	AK023249|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##AL834473|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC011806|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##GU295153|LOC100616530|100616530|tospeak##GU295154|LOC100616530|100616530|tospeak##GU295155|LOC100616530|100616530|tospeak##GU295156|LOC100616530|100616530|tospeak##GU295157|LOC100616530|100616530|tospeak##GU295158|LOC100616530|100616530|tospeak##GU295159|LOC100616530|100616530|tospeak##GU295160|LOC100616530|100616530|tospeak##GU295161|LOC100616530|100616530|tospeak##GU295162|LOC100616530|100616530|tospeak##GU295163|LOC100616530|100616530|tospeak##BC036855|C8orf37|157657|chromosome 8 open reading frame 37##BC150301|C8orf37|157657|chromosome 8 open reading frame 37##AK055162|C8orf37|157657|chromosome 8 open reading frame 37##GQ240139|C8orf37|157657|chromosome 8 open reading frame 37##NM_177965|C8orf37|157657|chromosome 8 open reading frame 37##BC127948|GDF6|392255|growth differentiation factor 6##BC127947|GDF6|392255|growth differentiation factor 6##AJ537424|GDF6|392255|growth differentiation factor 6##NM_001001557|GDF6|392255|growth differentiation factor 6	0.0	
chrX	19868017	19868142	reg1040805.p2	3.602	+	TSC_hg19_v1_chrX_-_19817907 NM_001024666	-50167	-	AK293234 AF542051 TSC_hg19_v1_chrX_-_19817892	-50204	-	TSC_hg19_v1_chrX_-_19689029 AK293237 NM_001184960	-179023	-	TSC_hg19_v1_chrX_-_19905450 AY542305	37384	-	TSC_hg19_v1_chrX_-_19905646 BC050663 BC015806	37553	-	TSC_hg19_v1_chrX_-_19905675 AK313308 AF230904 AY423734 NM_031892	37625	-	NM_001024666|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK293234|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF542051|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK293237|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_001184960|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY542305|SH3KBP1|30011|SH3-domain kinase binding protein 1##BC050663|SH3KBP1|30011|SH3-domain kinase binding protein 1##BC015806|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK313308|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF230904|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY423734|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_031892|SH3KBP1|30011|SH3-domain kinase binding protein 1	0.0	
chr11	18749301	18749425	reg1032508.p1	3.601	+	BC115396 BC115397 AK095113 NM_173588	-1616	-	TSC_hg19_v1_chr11_+_18720347 BC035692 NM_153347	-29015	+	TSC_hg19_v1_chr11_+_18720321 AK074600	-29060	+	AK294374 BC064807 AK316270 AK294673 BC039897 AK295604 AK090923 AX746685 AL832541 NM_001039970 NM_006906 NM_032781 TSC_hg19_v1_chr11_-_18813404	63902	-	BC096835 NM_147199	207183	-	BC063450 NM_054030	332864	-	BC115396|IGSF22|283284|immunoglobulin superfamily, member 22##BC115397|IGSF22|283284|immunoglobulin superfamily, member 22##AK095113|IGSF22|283284|immunoglobulin superfamily, member 22##NM_173588|IGSF22|283284|immunoglobulin superfamily, member 22##BC035692|TMEM86A|144110|transmembrane protein 86A##NM_153347|TMEM86A|144110|transmembrane protein 86A##AK074600|TMEM86A|144110|transmembrane protein 86A##AK294374|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC064807|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK316270|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK294673|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC039897|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK295604|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AK090923|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##AL832541|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_001039970|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_006906|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##NM_032781|PTPN5|84867|protein tyrosine phosphatase, non-receptor type 5 (striatum-enriched)##BC096835|MRGPRX1|259249|MAS-related GPR, member X1##NM_147199|MRGPRX1|259249|MAS-related GPR, member X1##BC063450|MRGPRX2|117194|MAS-related GPR, member X2##NM_054030|MRGPRX2|117194|MAS-related GPR, member X2	0.0	
chr12	122506048	122506166	reg1042096.p2	3.601	+	AK296159 TSC_hg19_v1_chr12_+_122459903 NM_001024808 NM_020993 AK316486 BC113627 BC094723 HQ258124 AB590498	-46214	+	TSC_hg19_v1_chr12_+_122356497 NM_001178003 NM_144668 BC028421 BC036233	-149626	+	TSC_hg19_v1_chr12_+_122326731 AB003177 NM_002813 AK315389 BC002383 BC004184 BC004213 DQ893594 EU831432 EU831524 AB528684	-179412	+	TSC_hg19_v1_chr12_+_122516655 BC151841 NM_014938	10500	+	TSC_hg19_v1_chr12_+_122516682 AF312918	10610	+	BC069272 TSC_hg19_v1_chr12_+_122614551	108413	+	AK296159|BCL7A|605|B-cell CLL/lymphoma 7A##NM_001024808|BCL7A|605|B-cell CLL/lymphoma 7A##NM_020993|BCL7A|605|B-cell CLL/lymphoma 7A##AK316486|BCL7A|605|B-cell CLL/lymphoma 7A##BC113627|BCL7A|605|B-cell CLL/lymphoma 7A##BC094723|BCL7A|605|B-cell CLL/lymphoma 7A##HQ258124|BCL7A|605|B-cell CLL/lymphoma 7A##NM_001178003|WDR66|144406|WD repeat domain 66##NM_144668|WDR66|144406|WD repeat domain 66##BC028421|WDR66|144406|WD repeat domain 66##BC036233|WDR66|144406|WD repeat domain 66##NM_002813|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK315389|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC002383|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004184|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004213|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##DQ893594|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831432|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831524|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC151841|MLXIP|22877|MLX interacting protein##NM_014938|MLXIP|22877|MLX interacting protein##AF312918|MLXIP|22877|MLX interacting protein##BC069272|MLXIP|22877|MLX interacting protein	0.0	
chr12	78396776	78396871	reg1036341.p1	3.601	+	NM_014903 AJ488201	-171691	+	BC136366 BC136367 TSC_hg19_v1_chr12_-_77459334 BC017481 NM_203394	-937534	-	BC000992 AY349166 U57646 TSC_hg19_v1_chr12_-_77272800 NM_001321	-1124040	-	AK094616 NM_001135805	860949	+	AK126908 NM_005639 TSC_hg19_v1_chr12_+_79258498	861652	+	TSC_hg19_v1_chr12_+_79258517 BX647240	861713	+	NM_014903|NAV3|89795|neuron navigator 3##AJ488201|NAV3|89795|neuron navigator 3##BC136366|E2F7|144455|E2F transcription factor 7##BC136367|E2F7|144455|E2F transcription factor 7##BC017481|E2F7|144455|E2F transcription factor 7##NM_203394|E2F7|144455|E2F transcription factor 7##BC000992|CSRP2|1466|cysteine and glycine-rich protein 2##AY349166|CSRP2|1466|cysteine and glycine-rich protein 2##U57646|CSRP2|1466|cysteine and glycine-rich protein 2##NM_001321|CSRP2|1466|cysteine and glycine-rich protein 2##AK094616|SYT1|6857|synaptotagmin I##NM_001135805|SYT1|6857|synaptotagmin I##AK126908|SYT1|6857|synaptotagmin I##NM_005639|SYT1|6857|synaptotagmin I##BX647240|SYT1|6857|synaptotagmin I	0.0	
chr14	21125893	21125990	reg1029180.p2	3.601	+	NM_001001968	-16092	-	HQ258082 AY665807 BC130347 BC130349 NM_001024822	-67011	-	BX161458 NM_145250	-67539	-	FJ236304 NM_001145 AK092422 NM_002937	26412	+	TSC_hg19_v1_chr14_+_21152776 AK313989 BC015520 BC054880 BX248010	26835	+	TSC_hg19_v1_chr14_+_21156940 NM_001097577 NM_194431 BC062698 BC020704	30991	+	NM_001001968|OR6S1|341799|olfactory receptor, family 6, subfamily S, member 1##HQ258082|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##AY665807|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BC130347|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BC130349|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##NM_001024822|RNASE12|493901|ribonuclease, RNase A family, 12 (non-active)##BX161458|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##NM_145250|RNASE11|122651|ribonuclease, RNase A family, 11 (non-active)##FJ236304|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_001145|ANG|283|angiogenin, ribonuclease, RNase A family, 5##AK092422|RNASE4|6038|ribonuclease, RNase A family, 4##NM_002937|RNASE4|6038|ribonuclease, RNase A family, 4##AK313989|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC015520|RNASE4|6038|ribonuclease, RNase A family, 4##BC054880|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BX248010|RNASE4|6038|ribonuclease, RNase A family, 4##NM_001097577|ANG|283|angiogenin, ribonuclease, RNase A family, 5##NM_194431|RNASE4|6038|ribonuclease, RNase A family, 4##BC062698|ANG|283|angiogenin, ribonuclease, RNase A family, 5##BC020704|ANG|283|angiogenin, ribonuclease, RNase A family, 5	0.0186	
chr19	36394746	36394881	reg1036117.p2	3.601	+	AL050163 BC046348 NM_001007469 NM_014266 TSC_hg19_v1_chr19_+_36393430 BC065224 BC035931 AF072844 AF122904 AY359058 AF285447 AB590940	-1376	+	TSC_hg19_v1_chr19_-_36391448 AF385434 NM_139239	-3314	-	TSC_hg19_v1_chr19_+_36359436 NM_001024807 NM_005166 BC013850 AK092376 BC012889 AK312292 BC032983 U48437 AB527091 CU680434 DQ891341 DQ894523	-35349	+	TSC_hg19_v1_chr19_-_36399181 BT009851 CR450342 CR542202 AB590208 AY074782 CU679890 DQ891092 DQ894274 AJ010098	4337	-	TSC_hg19_v1_chr19_-_36399198 AF019562 BC011175 AK290385	4379	-	TSC_hg19_v1_chr19_-_36399212 NM_001173514 NM_001173515 NM_003332 NM_198125	4400	-	AL050163|HCST|10870|hematopoietic cell signal transducer##BC046348|HCST|10870|hematopoietic cell signal transducer##NM_001007469|HCST|10870|hematopoietic cell signal transducer##NM_014266|HCST|10870|hematopoietic cell signal transducer##BC065224|HCST|10870|hematopoietic cell signal transducer##BC035931|HCST|10870|hematopoietic cell signal transducer##AF072844|HCST|10870|hematopoietic cell signal transducer##AF122904|HCST|10870|hematopoietic cell signal transducer##AY359058|HCST|10870|hematopoietic cell signal transducer##AF285447|HCST|10870|hematopoietic cell signal transducer##AF385434|NFKBID|84807|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta##NM_139239|NFKBID|84807|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta##NM_001024807|APLP1|333|amyloid beta (A4) precursor-like protein 1##NM_005166|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC013850|APLP1|333|amyloid beta (A4) precursor-like protein 1##AK092376|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC012889|APLP1|333|amyloid beta (A4) precursor-like protein 1##AK312292|APLP1|333|amyloid beta (A4) precursor-like protein 1##BC032983|APLP1|333|amyloid beta (A4) precursor-like protein 1##U48437|APLP1|333|amyloid beta (A4) precursor-like protein 1##DQ891341|APLP1|333|amyloid beta (A4) precursor-like protein 1##DQ894523|APLP1|333|amyloid beta (A4) precursor-like protein 1##BT009851|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR450342|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR542202|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AY074782|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ891092|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ894274|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AJ010098|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AF019562|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BC011175|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AK290385|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_001173514|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_001173515|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_003332|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_198125|TYROBP|7305|TYRO protein tyrosine kinase binding protein	0.0	
chr20	35978639	35978785	reg1035392.p1	3.601	+	TSC_hg19_v1_chr20_+_35974513 NM_198291 Z18364	-4205	+	TSC_hg19_v1_chr20_+_35973086 AF272982 NM_005417	-5619	+	TSC_hg19_v1_chr20_+_35918065 BC016822 BC014672	-60627	+	TSC_hg19_v1_chr20_+_36011960 BC011566	33291	+	TSC_hg19_v1_chr20_-_36073959 D28405	95243	-	NM_005386 NM_181689 TSC_hg19_v1_chr20_+_36149651 AK312069 U25034 BC001768 U25033 AB002392 BT019426	170957	+	NM_198291|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##Z18364|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##AF272982|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005417|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##BC016822|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC014672|MANBAL|63905|mannosidase, beta A, lysosomal-like##BC011566|SRC|6714|v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian)##NM_005386|NNAT|4826|neuronatin##NM_181689|NNAT|4826|neuronatin##AK312069|NNAT|4826|neuronatin##U25034|NNAT|4826|neuronatin##BC001768|NNAT|4826|neuronatin##U25033|NNAT|4826|neuronatin##AB002392|NNAT|4826|neuronatin##BT019426|NNAT|4826|neuronatin	0.0	
chr2	171069252	171069323	reg1035927.p1	3.601	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	-34602	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-385329	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-387902	-	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	502571	+	TSC_hg19_v1_chr2_+_171571942 AB464708	502690	+	TSC_hg19_v1_chr2_+_171572707 BC069026	503423	+	AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##BC069026|SP5|389058|Sp5 transcription factor	0.0	
chr2	178483587	178483767	reg1031593.p2	3.601	+	TSC_hg19_v1_chr2_-_178483463 CU692122 AK057530 AK125104 BC048006	-249	-	TSC_hg19_v1_chr2_-_178417525 AK296828 AK055552 BC033795 NM_152517	-66192	-	TSC_hg19_v1_chr2_+_178257497 AK225439 AK314259 Y09443 BC141820 AY544121 AK296239 AK316240	-226048	+	AK292395 BC042848 NM_152275	8	-	AJ251509 NM_001077196	269787	-	AF281865 NM_001077358	303865	-	AK057530|TTC30A|92104|tetratricopeptide repeat domain 30A##AK125104|TTC30A|92104|tetratricopeptide repeat domain 30A##BC048006|TTC30A|92104|tetratricopeptide repeat domain 30A##AK296828|TTC30B|150737|tetratricopeptide repeat domain 30B##AK055552|TTC30B|150737|tetratricopeptide repeat domain 30B##BC033795|TTC30B|150737|tetratricopeptide repeat domain 30B##NM_152517|TTC30B|150737|tetratricopeptide repeat domain 30B##AK314259|AGPS|8540|alkylglycerone phosphate synthase##Y09443|AGPS|8540|alkylglycerone phosphate synthase##BC141820|AGPS|8540|alkylglycerone phosphate synthase##AY544121|AGPS|8540|alkylglycerone phosphate synthase##AK296239|AGPS|8540|alkylglycerone phosphate synthase##AK316240|AGPS|8540|alkylglycerone phosphate synthase##AK292395|TTC30A|92104|tetratricopeptide repeat domain 30A##BC042848|TTC30A|92104|tetratricopeptide repeat domain 30A##NM_152275|TTC30A|92104|tetratricopeptide repeat domain 30A##AJ251509|PDE11A|50940|phosphodiesterase 11A##NM_001077196|PDE11A|50940|phosphodiesterase 11A##AF281865|PDE11A|50940|phosphodiesterase 11A##NM_001077358|PDE11A|50940|phosphodiesterase 11A	0.0	
chr4	186562256	186562410	reg1009183.p2	3.601	+	AK129863 BT007341 AB528880 CU674500 TSC_hg19_v1_chr4_-_186456662 AK222966 AF002280 AF002282 BC027870 AF039018 BC001017 AK313253 NM_001114107 NM_014476	-105688	-	BC038515 AK302815 AL833337 TSC_hg19_v1_chr4_-_186392907 AB080722 BC028419 BX641119 AK097605 NM_001145411 NM_152775	-169449	-	BC127739 BC141968 BC150574 NM_001114357	-211790	+	AK304653 TSC_hg19_v1_chr4_-_186577879 AK296461	15545	-	AK056758 NM_001145674 NM_001145675	15789	-	AK225812 NM_001145673	134732	-	AK129863|PDLIM3|27295|PDZ and LIM domain 3##BT007341|PDLIM3|27295|PDZ and LIM domain 3##AK222966|PDLIM3|27295|PDZ and LIM domain 3##AF002280|PDLIM3|27295|PDZ and LIM domain 3##AF002282|PDLIM3|27295|PDZ and LIM domain 3##BC027870|PDLIM3|27295|PDZ and LIM domain 3##AF039018|PDLIM3|27295|PDZ and LIM domain 3##BC001017|PDLIM3|27295|PDZ and LIM domain 3##AK313253|PDLIM3|27295|PDZ and LIM domain 3##NM_001114107|PDLIM3|27295|PDZ and LIM domain 3##NM_014476|PDLIM3|27295|PDZ and LIM domain 3##BC038515|CCDC110|256309|coiled-coil domain containing 110##AK302815|CCDC110|256309|coiled-coil domain containing 110##AL833337|CCDC110|256309|coiled-coil domain containing 110##AB080722|CCDC110|256309|coiled-coil domain containing 110##BC028419|CCDC110|256309|coiled-coil domain containing 110##BX641119|CCDC110|256309|coiled-coil domain containing 110##AK097605|CCDC110|256309|coiled-coil domain containing 110##NM_001145411|CCDC110|256309|coiled-coil domain containing 110##NM_152775|CCDC110|256309|coiled-coil domain containing 110##BC127739|C4orf47|441054|chromosome 4 open reading frame 47##BC141968|C4orf47|441054|chromosome 4 open reading frame 47##BC150574|C4orf47|441054|chromosome 4 open reading frame 47##NM_001114357|C4orf47|441054|chromosome 4 open reading frame 47##AK304653|SORBS2|8470|sorbin and SH3 domain containing 2##AK296461|SORBS2|8470|sorbin and SH3 domain containing 2##AK056758|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145674|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145675|SORBS2|8470|sorbin and SH3 domain containing 2##AK225812|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145673|SORBS2|8470|sorbin and SH3 domain containing 2	0.0	
chr7	101629137	101629297	reg1029776.p3	3.601	+	M74099 NM_181552	-168336	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-170008	+	BC002778 NM_138403	-356642	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	299180	+	TSC_hg19_v1_chr7_+_101928431 AB000520	299226	+	NM_001146210	367671	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.0	
chr7	73668884	73669027	reg1038136.p2	3.601	+	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	-219	-	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	-244	-	TSC_hg19_v1_chr7_+_73624361 AF252613	-44601	+	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	34832	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	199209	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	199353	+	NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AF252613|LAT2|7462|linker for activation of T cells family, member 2##AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1	0.0	
chr8	62278328	62278509	reg1036734.p1	3.601	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	-77868	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-687016	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-687130	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	323928	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	348600	-	TSC_hg19_v1_chr8_-_62627152 BC015518 BC025236 AK298577	348720	-	NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase##BC015518|ASPH|444|aspartate beta-hydroxylase##BC025236|ASPH|444|aspartate beta-hydroxylase##AK298577|ASPH|444|aspartate beta-hydroxylase	0.0	
chr11	33704038	33704191	reg1036969.p1	3.600	+	TSC_hg19_v1_chr11_+_33563772 AK124395 NM_012194	-140290	+	TSC_hg19_v1_chr11_+_33363104 AK304063	-340970	+	TSC_hg19_v1_chr11_+_33350077 AY425958	-354004	+	NM_001166692	18171	-	AK309894 NM_001127223 NM_001127225 NM_001127226	40158	-	NM_001127227	40383	-	AK124395|C11orf41|25758|chromosome 11 open reading frame 41##NM_012194|C11orf41|25758|chromosome 11 open reading frame 41##AK304063|HIPK3|10114|homeodomain interacting protein kinase 3##AY425958|HIPK3|10114|homeodomain interacting protein kinase 3##NM_001166692|C11orf91|100131378|chromosome 11 open reading frame 91##AK309894|CD59|966|CD59 molecule, complement regulatory protein##NM_001127223|CD59|966|CD59 molecule, complement regulatory protein##NM_001127225|CD59|966|CD59 molecule, complement regulatory protein##NM_001127226|CD59|966|CD59 molecule, complement regulatory protein##NM_001127227|CD59|966|CD59 molecule, complement regulatory protein	0.378513	CTCF.p2:8:0.379
chr14	74250016	74250083	reg1037682.p1	3.600	+	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	-23084	-	BC015668 TSC_hg19_v1_chr14_-_74226640	-23411	-	CR457112 BC039577 AK290980 TSC_hg19_v1_chr14_-_74181085 AF320308 BC007712 NM_006029	-69288	-	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	3870	-	TSC_hg19_v1_chr14_+_74318554 NM_001146154 NM_001146155 AY346133 AY424308 AK311280 NM_152444 BX641118 BC059364 AK309188 AK096410 BC034973	68540	+	NM_001242924 NM_001242926 NM_001242927 NM_001242928 NM_021188 AK299138	103269	+	AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##BC015668|C14orf43|91748|chromosome 14 open reading frame 43##CR457112|PNMA1|9240|paraneoplastic antigen MA1##BC039577|PNMA1|9240|paraneoplastic antigen MA1##AK290980|PNMA1|9240|paraneoplastic antigen MA1##AF320308|PNMA1|9240|paraneoplastic antigen MA1##BC007712|PNMA1|9240|paraneoplastic antigen MA1##NM_006029|PNMA1|9240|paraneoplastic antigen MA1##NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43##NM_001146154|PTGR2|145482|prostaglandin reductase 2##NM_001146155|PTGR2|145482|prostaglandin reductase 2##AY346133|PTGR2|145482|prostaglandin reductase 2##AY424308|PTGR2|145482|prostaglandin reductase 2##AK311280|PTGR2|145482|prostaglandin reductase 2##NM_152444|PTGR2|145482|prostaglandin reductase 2##BX641118|PTGR2|145482|prostaglandin reductase 2##BC059364|PTGR2|145482|prostaglandin reductase 2##AK309188|PTGR2|145482|prostaglandin reductase 2##AK096410|PTGR2|145482|prostaglandin reductase 2##NM_001242924|ZNF410|57862|zinc finger protein 410##NM_001242926|ZNF410|57862|zinc finger protein 410##NM_001242927|ZNF410|57862|zinc finger protein 410##NM_001242928|ZNF410|57862|zinc finger protein 410##NM_021188|ZNF410|57862|zinc finger protein 410##AK299138|ZNF410|57862|zinc finger protein 410	0.0	
chr16	3628735	3628912	reg1040346.p2	3.600	+	TSC_hg19_v1_chr16_-_3627397 AY601811 NM_178844 AK090431 AK090476	-1424	-	AK023359 NM_024793	-68930	+	TSC_hg19_v1_chr16_+_3551003 AB089691 NM_015041 BC017070 AB014543 AB527560	-77832	+	TSC_hg19_v1_chr16_-_3661587 NM_032444 AK122775	32760	-	NM_005223	74116	+	TSC_hg19_v1_chr16_-_3767521 U12595 BC001455 AF043254 AB528744 CU676340 DQ893476 DQ896346 BC000406 BC002994 AF154108 AK299127 BC018950 AK223049 AK223076 AK223205 BC023585 AK093344 NM_016292	138712	-	AY601811|NLRC3|197358|NLR family, CARD domain containing 3##NM_178844|NLRC3|197358|NLR family, CARD domain containing 3##AK090431|NLRC3|197358|NLR family, CARD domain containing 3##AK090476|NLRC3|197358|NLR family, CARD domain containing 3##AK023359|CLUAP1|23059|clusterin associated protein 1##NM_024793|CLUAP1|23059|clusterin associated protein 1##AB089691|CLUAP1|23059|clusterin associated protein 1##NM_015041|CLUAP1|23059|clusterin associated protein 1##BC017070|CLUAP1|23059|clusterin associated protein 1##AB014543|CLUAP1|23059|clusterin associated protein 1##NM_032444|SLX4|84464|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)##AK122775|SLX4|84464|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)##NM_005223|DNASE1|1773|deoxyribonuclease I##U12595|TRAP1|10131|TNF receptor-associated protein 1##BC001455|TRAP1|10131|TNF receptor-associated protein 1##AF043254|TRAP1|10131|TNF receptor-associated protein 1##DQ893476|TRAP1|10131|TNF receptor-associated protein 1##DQ896346|TRAP1|10131|TNF receptor-associated protein 1##BC000406|TRAP1|10131|TNF receptor-associated protein 1##BC002994|TRAP1|10131|TNF receptor-associated protein 1##AF154108|TRAP1|10131|TNF receptor-associated protein 1##AK299127|TRAP1|10131|TNF receptor-associated protein 1##BC018950|TRAP1|10131|TNF receptor-associated protein 1##AK223049|TRAP1|10131|TNF receptor-associated protein 1##AK223076|TRAP1|10131|TNF receptor-associated protein 1##AK223205|TRAP1|10131|TNF receptor-associated protein 1##BC023585|TRAP1|10131|TNF receptor-associated protein 1##AK093344|TRAP1|10131|TNF receptor-associated protein 1##NM_016292|TRAP1|10131|TNF receptor-associated protein 1	0.0	
chr1	7463439	7463552	reg1045111.p1	3.600	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-618004	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-701564	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-701613	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	367881	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	380914	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	381330	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.0	
chr17	56414906	56415076	reg1032490.p1	3.600	+	TSC_hg19_v1_chr17_+_56414668 AK000271 BC050403 BC032475	-302	+	AK311306 TSC_hg19_v1_chr17_+_56414566 BC064565	-422	+	AX721088 TSC_hg19_v1_chr17_-_56409882	-5114	-	AB527904 CR407663 EU446710 TSC_hg19_v1_chr17_-_56429531 AK311986 U38817 BC002802 U38818 NM_003168 U43923 AK129758	14545	-	AB527734 TSC_hg19_v1_chr17_-_56492959 AK296769 AK000322 BC109028	78045	-	TSC_hg19_v1_chr17_-_56494896 CR749257	79902	-	AK000271|LOC100506779|100506779|uncharacterized LOC100506779##BC050403|LOC100506779|100506779|uncharacterized LOC100506779##BC032475|LOC100506779|100506779|uncharacterized LOC100506779##AK311306|LOC100506779|100506779|uncharacterized LOC100506779##BC064565|LOC100506779|100506779|uncharacterized LOC100506779##CR407663|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##EU446710|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK311986|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38817|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##BC002802|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U38818|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##NM_003168|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##U43923|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK129758|SUPT4H1|6827|suppressor of Ty 4 homolog 1 (S. cerevisiae)##AK296769|RNF43|54894|ring finger protein 43##AK000322|RNF43|54894|ring finger protein 43##BC109028|RNF43|54894|ring finger protein 43##CR749257|RNF43|54894|ring finger protein 43	0.0	
chr17	8813891	8814026	reg1036990.p2	3.600	+	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-42974	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-111406	-	BC146949 BC146966 BC171861 NM_001128076	-152082	-	AY725853 AF128881 NM_014308	1858	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	55023	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	111009	+	BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##BC146949|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC146966|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC171861|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##NM_001128076|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1	0.0	
chr19	50400177	50400357	reg1030722.p1	3.600	+	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	-114	-	TSC_hg19_v1_chr19_+_50381392 AK090606 AX746531	-18809	+	NM_001168222 NM_024682 TSC_hg19_v1_chr19_+_50380945 BC003516 AK022230 AK300007 AK309412 AB449903 AB590884 CU678472	-19418	+	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	12835	-	NM_012068 AK290592	31721	+	NM_001193646 AK091985 AB021663 AK024402 TSC_hg19_v1_chr19_+_50432461 AB073613 BC005174	32167	+	BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##AK090606|TBC1D17|79735|TBC1 domain family, member 17##NM_001168222|TBC1D17|79735|TBC1 domain family, member 17##NM_024682|TBC1D17|79735|TBC1 domain family, member 17##BC003516|TBC1D17|79735|TBC1 domain family, member 17##AK022230|TBC1D17|79735|TBC1 domain family, member 17##AK300007|TBC1D17|79735|TBC1 domain family, member 17##AK309412|TBC1D17|79735|TBC1 domain family, member 17##AB449903|TBC1D17|79735|TBC1 domain family, member 17##CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5##NM_001193646|ATF5|22809|activating transcription factor 5##AK091985|ATF5|22809|activating transcription factor 5##AB021663|ATF5|22809|activating transcription factor 5##AK024402|ATF5|22809|activating transcription factor 5##AB073613|ATF5|22809|activating transcription factor 5##BC005174|ATF5|22809|activating transcription factor 5	0.0	
chr2	135366367	135366542	reg1035410.p2	3.600	+	NM_002410 D17716 AF113921	-354569	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-1040416	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-1187100	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	110102	-	AK125008 NM_138326 BC016018 BC107420 AB071418	229764	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	309943	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.0	
chr2	13791969	13792036	reg1039045.p2	3.600	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-933605	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	-934086	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-934749	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	980819	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	980849	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	1909427	-	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence	0.0	
chr3	15030554	15030687	reg1032705.p1	3.600	+	TSC_hg19_v1_chr3_-_14989860 AK096279 BC033386	-40727	-	BC008609 TSC_hg19_v1_chr3_-_14989656	-40983	-	BC056913 TSC_hg19_v1_chr3_-_14989505	-41158	-	CU678518 AK024433 AK024702 AK294123 BC003590 TSC_hg19_v1_chr3_-_15106800	76131	-	TSC_hg19_v1_chr3_-_15106823 NM_022497 AK298791	76194	-	AB209673 TSC_hg19_v1_chr3_-_15140645	110014	-	AK096279|LOC100505641|100505641|uncharacterized LOC100505641##BC033386|LOC100505641|100505641|uncharacterized LOC100505641##BC008609|LOC100505641|100505641|uncharacterized LOC100505641##BC056913|LOC100505641|100505641|uncharacterized LOC100505641##AK024433|MRPS25|64432|mitochondrial ribosomal protein S25##AK024702|MRPS25|64432|mitochondrial ribosomal protein S25##AK294123|MRPS25|64432|mitochondrial ribosomal protein S25##BC003590|MRPS25|64432|mitochondrial ribosomal protein S25##NM_022497|MRPS25|64432|mitochondrial ribosomal protein S25##AK298791|MRPS25|64432|mitochondrial ribosomal protein S25##AB209673|ZFYVE20|64145|zinc finger, FYVE domain containing 20	0.106499	
chr5	92917072	92917207	reg1006872.p1	3.600	+	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	-176	-	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-2238007	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-2240977	+	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	1844	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	3529	+	AK309742 TSC_hg19_v1_chr5_-_92957232	40072	-	AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	0.0	
chr7	115890154	115890267	reg1036348.p1	3.600	+	AK310995 NM_152829 AK291802 AF245357	-27191	+	NM_015641 AK299104 TSC_hg19_v1_chr7_+_115850592 BC001451 AK021575 AK300546 AK309324 AK222840 AF245356 AJ250865 AK315644 AB529039 EU176352 EU176694	-39557	+	TSC_hg19_v1_chr7_-_115670864 CR933605 NM_001018058 NM_012252	-219358	-	TSC_hg19_v1_chr7_+_116139705 AY353255 BC005256 NM_001206747 NM_001233 NM_198212 AK310786 AK311964 AF035752 AB451285 AB451417 AB489180 AM393815 BT007051 CR407685	249517	+	NM_001206748	249887	+	NM_001753 AK290871	274630	+	AK310995|TES|26136|testis derived transcript (3 LIM domains)##NM_152829|TES|26136|testis derived transcript (3 LIM domains)##AK291802|TES|26136|testis derived transcript (3 LIM domains)##AF245357|TES|26136|testis derived transcript (3 LIM domains)##NM_015641|TES|26136|testis derived transcript (3 LIM domains)##AK299104|TES|26136|testis derived transcript (3 LIM domains)##BC001451|TES|26136|testis derived transcript (3 LIM domains)##AK021575|TES|26136|testis derived transcript (3 LIM domains)##AK300546|TES|26136|testis derived transcript (3 LIM domains)##AK309324|TES|26136|testis derived transcript (3 LIM domains)##AK222840|TES|26136|testis derived transcript (3 LIM domains)##AF245356|TES|26136|testis derived transcript (3 LIM domains)##AJ250865|TES|26136|testis derived transcript (3 LIM domains)##AK315644|TES|26136|testis derived transcript (3 LIM domains)##EU176352|TES|26136|testis derived transcript (3 LIM domains)##EU176694|TES|26136|testis derived transcript (3 LIM domains)##CR933605|TFEC|22797|transcription factor EC##NM_001018058|TFEC|22797|transcription factor EC##NM_012252|TFEC|22797|transcription factor EC##AY353255|CAV2|858|caveolin 2##BC005256|CAV2|858|caveolin 2##NM_001206747|CAV2|858|caveolin 2##NM_001233|CAV2|858|caveolin 2##NM_198212|CAV2|858|caveolin 2##AK310786|CAV2|858|caveolin 2##AK311964|CAV2|858|caveolin 2##AF035752|CAV2|858|caveolin 2##AB451285|CAV2|858|caveolin 2##AB451417|CAV2|858|caveolin 2##AM393815|CAV2|858|caveolin 2##BT007051|CAV2|858|caveolin 2##CR407685|CAV2|858|caveolin 2##NM_001206748|CAV2|858|caveolin 2##NM_001753|CAV1|857|caveolin 1, caveolae protein, 22kDa##AK290871|CAV1|857|caveolin 1, caveolae protein, 22kDa	0.0	
chr10	99350044	99350157	reg1037510.p2	3.599	+	AM393165 AM393183 AM393504 AM393792 NM_001009997 BC037252	-682	+	TSC_hg19_v1_chr10_+_99344421 AK289440 CU691258 CU692268 EU831607 EU831618 EU831694 EU831704	-5660	+	AK094791 TSC_hg19_v1_chr10_+_99344126 BC011916 NM_001134670 NM_138413 BC045550 BC057821 AK293733	-5995	+	AK289406 DQ338435 DQ338436 AL834132 BC022054 BC093023 TSC_hg19_v1_chr10_-_99393255 AK098791 AJ312050 NM_178832	43159	-	BC010230 BC040015 AJ431726 NM_001098831	43781	-	TSC_hg19_v1_chr10_+_99400444 AJ303098 NM_018425	50342	+	AM393165|C10orf62|414157|chromosome 10 open reading frame 62##AM393183|C10orf62|414157|chromosome 10 open reading frame 62##AM393504|C10orf62|414157|chromosome 10 open reading frame 62##AM393792|C10orf62|414157|chromosome 10 open reading frame 62##NM_001009997|C10orf62|414157|chromosome 10 open reading frame 62##BC037252|C10orf62|414157|chromosome 10 open reading frame 62##AK289440|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831607|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831618|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831694|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##EU831704|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##AK094791|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC011916|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##NM_001134670|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##NM_138413|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC045550|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##BC057821|HOGA1|112817|4-hydroxy-2-oxoglutarate aldolase 1##AK289406|MORN4|118812|MORN repeat containing 4##DQ338435|MORN4|118812|MORN repeat containing 4##DQ338436|MORN4|118812|MORN repeat containing 4##AL834132|MORN4|118812|MORN repeat containing 4##BC022054|MORN4|118812|MORN repeat containing 4##BC093023|MORN4|118812|MORN repeat containing 4##AK098791|MORN4|118812|MORN repeat containing 4##AJ312050|MORN4|118812|MORN repeat containing 4##NM_178832|MORN4|118812|MORN repeat containing 4##BC010230|MORN4|118812|MORN repeat containing 4##BC040015|MORN4|118812|MORN repeat containing 4##AJ431726|MORN4|118812|MORN repeat containing 4##NM_001098831|MORN4|118812|MORN repeat containing 4##AJ303098|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##NM_018425|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha	0.0	
chr12	116436089	116436222	reg1017548.p2	3.599	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-1314015	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-1589937	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-1592231	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	278795	-	TSC_hg19_v1_chr12_-_116715263 AY338463	279005	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	535074	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.99784	
chr1	22141132	22141277	reg1040776.p2	3.599	+	AK127275 NM_001013693 BC146860	-2398	+	TSC_hg19_v1_chr1_-_22109701 AK026930 NM_001032730 NM_032236	-31505	-	TSC_hg19_v1_chr1_-_22109643 BC103724 BC067261	-31570	-	TSC_hg19_v1_chr1_-_22263804 X62515 NM_005529 M85289	122562	-	NM_007352 AK092382 AK308518 AX747509 BC005216 M18692 AK315798 AK308510 M16630	162275	+	BC005918 BC015103 D00306 NM_005747 BC007028 AK225620 AK308514 BC008383 CU675183 CU678941 DQ893182 DQ896490	186953	+	AK127275|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001013693|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##BC146860|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001032730|USP48|84196|ubiquitin specific peptidase 48##NM_032236|USP48|84196|ubiquitin specific peptidase 48##BC103724|USP48|84196|ubiquitin specific peptidase 48##BC067261|USP48|84196|ubiquitin specific peptidase 48##X62515|HSPG2|3339|heparan sulfate proteoglycan 2##NM_005529|HSPG2|3339|heparan sulfate proteoglycan 2##M85289|HSPG2|3339|heparan sulfate proteoglycan 2##NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B##M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A##M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B##BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A##D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A	0.134094	
chr19	36095463	36095577	reg1036808.p1	3.599	+	AK058032 AK223259 NM_000704	-40961	-	TSC_hg19_v1_chr19_-_36036923 CR627053	-58612	-	TSC_hg19_v1_chr19_+_36036553 NM_001242597 NM_001242598 NM_032635 Y18007 BC001118 CU674562	-58976	+	TSC_hg19_v1_chr19_+_36103655 BC064390 NM_015302 BC171905 BC157882 AK307703 AB020648 BC013947	8151	+	TSC_hg19_v1_chr19_+_36119937 BC031682	24422	+	TSC_hg19_v1_chr19_+_36119959 BC002868 BC004204 NM_024321 AK301669 AB384666 CU678262	24486	+	AK058032|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##AK223259|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##NM_000704|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##CR627053|LOC100506469|100506469|uncharacterized LOC100506469##NM_001242597|TMEM147|10430|transmembrane protein 147##NM_001242598|TMEM147|10430|transmembrane protein 147##NM_032635|TMEM147|10430|transmembrane protein 147##Y18007|TMEM147|10430|transmembrane protein 147##BC001118|TMEM147|10430|transmembrane protein 147##BC064390|HAUS5|23354|HAUS augmin-like complex, subunit 5##NM_015302|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC171905|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC157882|HAUS5|23354|HAUS augmin-like complex, subunit 5##AK307703|HAUS5|23354|HAUS augmin-like complex, subunit 5##AB020648|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC013947|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC031682|RBM42|79171|RNA binding motif protein 42##BC002868|RBM42|79171|RNA binding motif protein 42##BC004204|RBM42|79171|RNA binding motif protein 42##NM_024321|RBM42|79171|RNA binding motif protein 42##AK301669|RBM42|79171|RNA binding motif protein 42	0.0	
chr2	179886225	179886346	reg1034993.p2	3.599	+	X90568 BC013396 TSC_hg19_v1_chr2_-_179672150 AK056602 BC029400 BC058824 BC070170 NM_003319 NM_133378 NM_133379 NM_133432 NM_133437	-214182	-	X98114 X98115 TSC_hg19_v1_chr2_-_179659718	-226584	-	TSC_hg19_v1_chr2_+_179387947 AK093733	-498325	+	AL832777 NM_173648	28500	-	AY209190 TSC_hg19_v1_chr2_-_180129277 AK096232 NM_178123 BC047578	243120	-	AK057999 NM_001113398	541029	-	X90568|TTN|7273|titin##BC013396|TTN|7273|titin##AK056602|TTN|7273|titin##BC029400|TTN|7273|titin##BC058824|TTN|7273|titin##BC070170|TTN|7273|titin##NM_003319|TTN|7273|titin##NM_133378|TTN|7273|titin##NM_133379|TTN|7273|titin##NM_133432|TTN|7273|titin##NM_133437|TTN|7273|titin##X98114|TTN|7273|titin##X98115|TTN|7273|titin##AK093733|LOC100506866|100506866|uncharacterized LOC100506866##AL832777|CCDC141|285025|coiled-coil domain containing 141##NM_173648|CCDC141|285025|coiled-coil domain containing 141##AY209190|SESTD1|91404|SEC14 and spectrin domains 1##AK096232|SESTD1|91404|SEC14 and spectrin domains 1##NM_178123|SESTD1|91404|SEC14 and spectrin domains 1##BC047578|SESTD1|91404|SEC14 and spectrin domains 1##AK057999|ZNF385B|151126|zinc finger protein 385B##NM_001113398|ZNF385B|151126|zinc finger protein 385B	0.0	
chr22	25005119	25005216	reg1038987.p2	3.599	+	TSC_hg19_v1_chr22_+_25003637 NM_001032365	-1544	+	AL832738 TSC_hg19_v1_chr22_+_24999158 NM_001032364 BC035341 NM_005265 L20494 J04131	-5974	+	TSC_hg19_v1_chr22_-_24989036 BC032388 BC108684 NM_207644 AK097054	-16155	-	AB079368 NM_001008496 AK302409 AK315806	165517	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	197043	+	BC130647 BC130649 CR456388 NM_001001663	330145	-	NM_001032365|GGT1|2678|gamma-glutamyltransferase 1##AL832738|GGT1|2678|gamma-glutamyltransferase 1##NM_001032364|GGT1|2678|gamma-glutamyltransferase 1##BC035341|GGT1|2678|gamma-glutamyltransferase 1##NM_005265|GGT1|2678|gamma-glutamyltransferase 1##L20494|GGT1|2678|gamma-glutamyltransferase 1##J04131|GGT1|2678|gamma-glutamyltransferase 1##BC032388|FAM211B|388886|family with sequence similarity 211, member B##BC108684|FAM211B|388886|family with sequence similarity 211, member B##NM_207644|FAM211B|388886|family with sequence similarity 211, member B##AK097054|FAM211B|388886|family with sequence similarity 211, member B##AB079368|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001008496|PIWIL3|440822|piwi-like 3 (Drosophila)##AK302409|PIWIL3|440822|piwi-like 3 (Drosophila)##AK315806|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211	0.0	
chr4	99584709	99584802	reg1041090.p1	3.599	+	TSC_hg19_v1_chr4_-_99579781 BC009704 AF065389 AK315723 NM_005723	-4996	-	TSC_hg19_v1_chr4_+_99182534 NM_001100426 NM_001100427 NM_001100428 NM_001100429 NM_001100430 NM_021159 AK295156 AK055032 BC001816 BC001851 BC098269 BC098334 BC099708 BC099845	-402161	+	CU691442 BC036870 NM_174952	-520410	-	AK300982 NM_001130678 AB528981 DQ890728 DQ893903 TSC_hg19_v1_chr4_-_99850278 BC012611 BC107715 AK295083	265505	-	M15353 TSC_hg19_v1_chr4_-_99850288	265536	-	NM_001130679 NM_001968 BC035166	267031	-	BC009704|TSPAN5|10098|tetraspanin 5##AF065389|TSPAN5|10098|tetraspanin 5##AK315723|TSPAN5|10098|tetraspanin 5##NM_005723|TSPAN5|10098|tetraspanin 5##NM_001100426|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100427|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100428|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100429|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_001100430|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##NM_021159|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK295156|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##AK055032|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001816|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC001851|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098269|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC098334|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099708|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC099845|RAP1GDS1|5910|RAP1, GTP-GDP dissociation stimulator 1##BC036870|C4orf37|285555|chromosome 4 open reading frame 37##NM_174952|C4orf37|285555|chromosome 4 open reading frame 37##AK300982|EIF4E|1977|eukaryotic translation initiation factor 4E##NM_001130678|EIF4E|1977|eukaryotic translation initiation factor 4E##DQ890728|EIF4E|1977|eukaryotic translation initiation factor 4E##DQ893903|EIF4E|1977|eukaryotic translation initiation factor 4E##BC012611|EIF4E|1977|eukaryotic translation initiation factor 4E##BC107715|EIF4E|1977|eukaryotic translation initiation factor 4E##M15353|EIF4E|1977|eukaryotic translation initiation factor 4E##NM_001130679|EIF4E|1977|eukaryotic translation initiation factor 4E##NM_001968|EIF4E|1977|eukaryotic translation initiation factor 4E##BC035166|EIF4E|1977|eukaryotic translation initiation factor 4E	0.0	
chr5	102223453	102223519	reg1042015.p2	3.599	+	M37721 TSC_hg19_v1_chr5_+_102201730 AK296521 AK290158 S75037 S75038 AB527419 AB095007 BT007419	-21680	+	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	-21956	+	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	-388853	-	BC151135 BC157835 BC015325 CR627424 AK295796 AK225572 AK000132 NM_017676 TSC_hg19_v1_chr5_-_102455843	232327	-	AK310544 AB007893 TSC_hg19_v1_chr5_+_102456004	232495	+	TSC_hg19_v1_chr5_+_102456089 AK294787	232572	+	M37721|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK296521|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK290158|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75037|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75038|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AB095007|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BT007419|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC151135|GIN1|54826|gypsy retrotransposon integrase 1##BC157835|GIN1|54826|gypsy retrotransposon integrase 1##BC015325|GIN1|54826|gypsy retrotransposon integrase 1##CR627424|GIN1|54826|gypsy retrotransposon integrase 1##AK295796|GIN1|54826|gypsy retrotransposon integrase 1##AK225572|GIN1|54826|gypsy retrotransposon integrase 1##AK000132|GIN1|54826|gypsy retrotransposon integrase 1##NM_017676|GIN1|54826|gypsy retrotransposon integrase 1##AB007893|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK294787|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2	0.0	
chr6	74362412	74362534	reg1031851.p1	3.599	+	BC012891 BC010735 BC071619 BC082268 BC071741 BC008587 BC018150 BC018641 BC019669 BC029997 BC038339 BC072385 BC014224 BC018850 BC009875 BC035877 BC111051 X03558 AK315827 TSC_hg19_v1_chr6_-_74230757 AK223030 AK024888 AK222551 AK223046 AK297878 AK300922 BC021686 BC070131 AK026650 AK055058 AK058051 AK058082 AK098510 AK098518 AK098623 AK127384 AK222515 AK222523 AK222982 AK289374 AK289442 AK290691 AK304214 BC028674 BC066893 BC066894 BC070500 D28375 NM_001402	-131727	-	TSC_hg19_v1_chr6_-_74230163 AY043301	-132303	-	AK222519 BC020477 DQ867534 AF328730 AF397403 TSC_hg19_v1_chr6_-_74229235	-133304	-	DQ891462 EU176585 TSC_hg19_v1_chr6_-_74363649	1157	-	BC020961 AK075320 TSC_hg19_v1_chr6_-_74363692 AK315789 AK294068 NM_012434 AJ387747	1307	-	TSC_hg19_v1_chr6_+_74405513 NM_001159587 NM_001159588 NM_133493	43092	+	BC012891|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC010735|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC071619|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC082268|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC071741|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC008587|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018150|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018641|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC019669|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC029997|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC038339|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC072385|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC014224|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018850|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC009875|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC035877|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC111051|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##X03558|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK315827|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK223030|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK024888|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222551|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK223046|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK297878|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK300922|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC021686|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC070131|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK026650|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK055058|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK058051|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK058082|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098510|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098518|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098623|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK127384|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222515|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222523|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222982|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK289374|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK289442|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK290691|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK304214|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC028674|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC066893|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC066894|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##NM_001402|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AY043301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222519|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC020477|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##DQ867534|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AF328730|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AF397403|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##DQ891462|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##EU176585|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##BC020961|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AK075320|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AK315789|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AK294068|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##NM_012434|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AJ387747|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##NM_001159587|CD109|135228|CD109 molecule##NM_001159588|CD109|135228|CD109 molecule##NM_133493|CD109|135228|CD109 molecule	1.053299	CTCF.p2:34:0.955
chr7	72838589	72838656	reg1041665.p2	3.599	+	NM_001135211 AK302121 NM_003602 AK310255 BC036817 AF038847 CU691432 EU176233 EU176537 GQ129339 GQ129340	-96330	+	AK057366 AY081948 AY081949 NM_178125	-96538	-	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	-115798	-	NM_003508 BC026333	9488	+	BC136520 BC065029 TSC_hg19_v1_chr7_-_72936492	97861	-	TSC_hg19_v1_chr7_-_72936538 AF084479	97927	-	NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa##AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa##NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa##AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa##BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa##AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##NM_003508|FZD9|8326|frizzled family receptor 9##BC026333|FZD9|8326|frizzled family receptor 9##BC136520|BAZ1B|9031|bromodomain adjacent to zinc finger domain, 1B##BC065029|BAZ1B|9031|bromodomain adjacent to zinc finger domain, 1B##AF084479|BAZ1B|9031|bromodomain adjacent to zinc finger domain, 1B	0.0	
chr8	135575541	135575722	reg1030534.p2	3.599	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-991534	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-1266134	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1372301	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	133163	-	TSC_hg19_v1_chr8_-_135725053 AB463359	149448	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	149643	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr10	121059207	121059298	reg1036803.p1	3.598	+	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-91991	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-120905	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-120949	-	NM_002925	236792	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	242938	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	296856	-	BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.136322	
chr10	132139706	132139823	reg1036541.p2	3.598	+	TSC_hg19_v1_chr10_+_131934681 AJ010841 AB463691	-205049	+	TSC_hg19_v1_chr10_+_131934675 AF118649 AK225609	-205089	+	TSC_hg19_v1_chr10_+_131934662 NM_001199868 NM_006541 BC005289 AK022131 AF118652	-205109	+	TSC_hg19_v1_chr10_-_133109808 BC093639 BC101535	970056	-	BC042951 NM_174937 TSC_hg19_v1_chr10_-_133110013	970237	-	CU692440 AB528671 U15174 BC009342 BC080643 TSC_hg19_v1_chr10_-_133795428 AK222626 AK295136 BC021989 AF002697 NM_004052	1655612	-	AJ010841|GLRX3|10539|glutaredoxin 3##AF118649|GLRX3|10539|glutaredoxin 3##AK225609|GLRX3|10539|glutaredoxin 3##NM_001199868|GLRX3|10539|glutaredoxin 3##NM_006541|GLRX3|10539|glutaredoxin 3##BC005289|GLRX3|10539|glutaredoxin 3##AK022131|GLRX3|10539|glutaredoxin 3##AF118652|GLRX3|10539|glutaredoxin 3##BC093639|TCERG1L|256536|transcription elongation regulator 1-like##BC101535|TCERG1L|256536|transcription elongation regulator 1-like##BC042951|TCERG1L|256536|transcription elongation regulator 1-like##NM_174937|TCERG1L|256536|transcription elongation regulator 1-like##U15174|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC009342|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC080643|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK222626|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AK295136|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##BC021989|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##AF002697|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3##NM_004052|BNIP3|664|BCL2/adenovirus E1B 19kDa interacting protein 3	0.0	
chr10	14064339	14064503	reg1041098.p2	3.598	+	TSC_hg19_v1_chr10_-_14050453 AK001072	-13929	-	TSC_hg19_v1_chr10_-_13749648 AK057828	-314732	-	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-435434	+	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	308429	-	TSC_hg19_v1_chr10_-_14646259 BC064407	581896	-	TSC_hg19_v1_chr10_-_14646423 BC072452	582008	-	AK001072|FRMD4A|55691|FERM domain containing 4A##AK057828|FRMD4A|55691|FERM domain containing 4A##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B	0.0	
chr10	1582282	1582416	reg1035486.p1	3.598	+	TSC_hg19_v1_chr10_+_1102822 AK292591	-479523	+	TSC_hg19_v1_chr10_+_1102750 NM_014023 AK307259 AL136827	-479580	+	BC057827 TSC_hg19_v1_chr10_-_1102645	-479697	-	AF034837 NM_018702	197320	-	TSC_hg19_v1_chr10_+_3109739 BC029138 NM_002627 AK291841 BC002536 D25328 AB385041 DQ895147 EU176319 CU678026	1527398	+	AK092597 AX747622 NM_001242339	1528469	+	AK292591|WDR37|22884|WD repeat domain 37##NM_014023|WDR37|22884|WD repeat domain 37##AK307259|WDR37|22884|WD repeat domain 37##AL136827|WDR37|22884|WD repeat domain 37##BC057827|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AF034837|ADARB2|105|adenosine deaminase, RNA-specific, B2##NM_018702|ADARB2|105|adenosine deaminase, RNA-specific, B2##BC029138|PFKP|5214|phosphofructokinase, platelet##NM_002627|PFKP|5214|phosphofructokinase, platelet##AK291841|PFKP|5214|phosphofructokinase, platelet##BC002536|PFKP|5214|phosphofructokinase, platelet##D25328|PFKP|5214|phosphofructokinase, platelet##DQ895147|PFKP|5214|phosphofructokinase, platelet##EU176319|PFKP|5214|phosphofructokinase, platelet##AK092597|PFKP|5214|phosphofructokinase, platelet##NM_001242339|PFKP|5214|phosphofructokinase, platelet	0.0	
chr11	133347004	133347106	reg1043764.p1	3.598	+	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-533450	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-534041	-	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-1565716	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	55259	-	AF521713 AK098717 NM_174927 BC058039	368326	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	479827	-	AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B	0.036205	
chr13	111832312	111832379	reg1036998.p2	3.598	+	TSC_hg19_v1_chr13_+_111806070 D63476	-26267	+	TSC_hg19_v1_chr13_+_111806041 AB177849 NM_003899	-26294	+	AK300157 TSC_hg19_v1_chr13_+_111806035	-26309	+	NM_001113513 BC050521	6841	+	AK300272 TSC_hg19_v1_chr13_+_111855425	23077	+	BC029889 NM_152324	140669	+	D63476|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AB177849|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_003899|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK300157|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113513|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC050521|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC029889|C13orf16|121793|chromosome 13 open reading frame 16##NM_152324|C13orf16|121793|chromosome 13 open reading frame 16	0.0	
chr16	11170275	11170400	reg1036919.p2	3.598	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-131894	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-134102	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-134171	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	179713	-	X63758 BC096135 BC096136 BC096137 NM_005425	192801	-	NM_021247	197114	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr16	88700811	88700991	reg1014885.p3	3.598	+	TSC_hg19_v1_chr16_+_88636880 BC050463	-64032	+	AK056632 AK225807 TSC_hg19_v1_chr16_+_88636823	-64073	+	AK300254 AK302716 TSC_hg19_v1_chr16_+_88636810	-64091	+	AF152099 AY358471 BC069410 NM_013278 BC101835 BC112196 AF142410	4102	+	AK097127 AK125578 AK300049 AK309030 TSC_hg19_v1_chr16_-_88717462 BT006861 DQ893235 DQ896565 AB590173 BC048338 BC033739 BC006465 BC011565 BC028224 M21186 NM_000101	16548	-	BT006930 AB527587 DQ890562 DQ893724 TSC_hg19_v1_chr16_-_88729519 NM_002461 U49260 AB209229 BC000011	28616	-	BC050463|ZC3H18|124245|zinc finger CCCH-type containing 18##AK225807|ZC3H18|124245|zinc finger CCCH-type containing 18##AK300254|ZC3H18|124245|zinc finger CCCH-type containing 18##AK302716|ZC3H18|124245|zinc finger CCCH-type containing 18##AF152099|IL17C|27189|interleukin 17C##AY358471|IL17C|27189|interleukin 17C##BC069410|IL17C|27189|interleukin 17C##NM_013278|IL17C|27189|interleukin 17C##BC101835|IL17C|27189|interleukin 17C##BC112196|IL17C|27189|interleukin 17C##AK097127|CYBA|1535|cytochrome b-245, alpha polypeptide##AK300049|CYBA|1535|cytochrome b-245, alpha polypeptide##BT006861|CYBA|1535|cytochrome b-245, alpha polypeptide##DQ893235|CYBA|1535|cytochrome b-245, alpha polypeptide##DQ896565|CYBA|1535|cytochrome b-245, alpha polypeptide##BC033739|CYBA|1535|cytochrome b-245, alpha polypeptide##BC006465|CYBA|1535|cytochrome b-245, alpha polypeptide##BC011565|CYBA|1535|cytochrome b-245, alpha polypeptide##BC028224|CYBA|1535|cytochrome b-245, alpha polypeptide##M21186|CYBA|1535|cytochrome b-245, alpha polypeptide##NM_000101|CYBA|1535|cytochrome b-245, alpha polypeptide##BT006930|MVD|4597|mevalonate (diphospho) decarboxylase##DQ890562|MVD|4597|mevalonate (diphospho) decarboxylase##DQ893724|MVD|4597|mevalonate (diphospho) decarboxylase##NM_002461|MVD|4597|mevalonate (diphospho) decarboxylase##U49260|MVD|4597|mevalonate (diphospho) decarboxylase##AB209229|MVD|4597|mevalonate (diphospho) decarboxylase##BC000011|MVD|4597|mevalonate (diphospho) decarboxylase	0.065443	
chr21	15853209	15853372	reg1032203.p2	3.598	+	CU690336 TSC_hg19_v1_chr21_-_15755457 AK299004 AK312396 AK128540 AK223282 BC036370 U04735 NM_006948	-97817	-	NM_144770 AK091331 AX746917 AF519623 BC030196 CU688832 AY077695	-264793	+	AB463838 AY197607 NM_198996	-274042	-	BC020638 TSC_hg19_v1_chr21_-_15918637 BC029112 AF519621 AF222927 AK125144 NM_022136	65359	-	AK289786 NM_003489 TSC_hg19_v1_chr21_-_16437302	583927	-	TSC_hg19_v1_chr21_+_17102300 AF170562 BC075792	1249035	+	AK299004|HSPA13|6782|heat shock protein 70kDa family, member 13##AK312396|HSPA13|6782|heat shock protein 70kDa family, member 13##AK128540|HSPA13|6782|heat shock protein 70kDa family, member 13##AK223282|HSPA13|6782|heat shock protein 70kDa family, member 13##BC036370|HSPA13|6782|heat shock protein 70kDa family, member 13##U04735|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_006948|HSPA13|6782|heat shock protein 70kDa family, member 13##NM_144770|RBM11|54033|RNA binding motif protein 11##AK091331|RBM11|54033|RNA binding motif protein 11##AF519623|RBM11|54033|RNA binding motif protein 11##BC030196|RBM11|54033|RNA binding motif protein 11##AY077695|RBM11|54033|RNA binding motif protein 11##AY197607|LIPI|149998|lipase, member I##NM_198996|LIPI|149998|lipase, member I##BC029112|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF519621|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AF222927|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK125144|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##NM_022136|SAMSN1|64092|SAM domain, SH3 domain and nuclear localization signals 1##AK289786|NRIP1|8204|nuclear receptor interacting protein 1##NM_003489|NRIP1|8204|nuclear receptor interacting protein 1##AF170562|USP25|29761|ubiquitin specific peptidase 25##BC075792|USP25|29761|ubiquitin specific peptidase 25	0.0	
chr22	40915706	40915830	reg1035585.p1	3.598	+	TSC_hg19_v1_chr22_-_40859427 AJ297257	-56338	-	TSC_hg19_v1_chr22_+_40766652 AK301042	-149113	+	TSC_hg19_v1_chr22_+_40766636 AY308849 BC008078	-149127	+	TSC_hg19_v1_chr22_-_41032681 AF368061	116885	-	TSC_hg19_v1_chr22_-_41032716 BC115039 NM_020831 AF448806 AB037859 BC064620 AJ297258	116936	-	AK314857 AF490537 NM_005297 BC001736 BC021146 AY745811 AY747629 CR456497 AB063174 CU013094 CU013382 AB463112 AY562945 BT006725 DQ893603 DQ895065	159453	+	AJ297257|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AK301042|SGSM3|27352|small G protein signaling modulator 3##AY308849|SGSM3|27352|small G protein signaling modulator 3##BC008078|SGSM3|27352|small G protein signaling modulator 3##AF368061|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC115039|MKL1|57591|megakaryoblastic leukemia (translocation) 1##NM_020831|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AF448806|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AB037859|MKL1|57591|megakaryoblastic leukemia (translocation) 1##BC064620|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AJ297258|MKL1|57591|megakaryoblastic leukemia (translocation) 1##AK314857|MCHR1|2847|melanin-concentrating hormone receptor 1##AF490537|MCHR1|2847|melanin-concentrating hormone receptor 1##NM_005297|MCHR1|2847|melanin-concentrating hormone receptor 1##BC001736|MCHR1|2847|melanin-concentrating hormone receptor 1##BC021146|MCHR1|2847|melanin-concentrating hormone receptor 1##AY745811|MCHR1|2847|melanin-concentrating hormone receptor 1##AY747629|MCHR1|2847|melanin-concentrating hormone receptor 1##CR456497|MCHR1|2847|melanin-concentrating hormone receptor 1##AB063174|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013094|MCHR1|2847|melanin-concentrating hormone receptor 1##CU013382|MCHR1|2847|melanin-concentrating hormone receptor 1##AY562945|MCHR1|2847|melanin-concentrating hormone receptor 1##BT006725|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ893603|MCHR1|2847|melanin-concentrating hormone receptor 1##DQ895065|MCHR1|2847|melanin-concentrating hormone receptor 1	0.0	
chr22	41993258	41993408	reg1012934.p1	3.598	+	CU013144 CU013432 AB528210 AK316580 U62526 U86070 CR456544 BC010855 D87810 TSC_hg19_v1_chr22_-_41985841 AK289368 BC016818 NM_002676	-7493	-	TSC_hg19_v1_chr22_+_41957014 NM_014460 AK313407 BC067113 AL834417	-36264	+	TSC_hg19_v1_chr22_-_41940495 AY092087 AK026524 AK129663 NM_138338 NM_001018050 NM_001018052 CR456459	-52833	-	AB528118 CU013008 CU013296 CR456458 BC093956 BC112179 BC171724 TSC_hg19_v1_chr22_-_42017031 AF038183	23603	-	TSC_hg19_v1_chr22_-_42017032 NM_015704	23734	-	TSC_hg19_v1_chr22_+_42017271 AK315618 NM_001469	23943	+	CU013144|PMM1|5372|phosphomannomutase 1##CU013432|PMM1|5372|phosphomannomutase 1##AK316580|PMM1|5372|phosphomannomutase 1##U62526|PMM1|5372|phosphomannomutase 1##U86070|PMM1|5372|phosphomannomutase 1##CR456544|PMM1|5372|phosphomannomutase 1##BC010855|PMM1|5372|phosphomannomutase 1##D87810|PMM1|5372|phosphomannomutase 1##AK289368|PMM1|5372|phosphomannomutase 1##BC016818|PMM1|5372|phosphomannomutase 1##NM_002676|PMM1|5372|phosphomannomutase 1##NM_014460|CSDC2|27254|cold shock domain containing C2, RNA binding##AK313407|CSDC2|27254|cold shock domain containing C2, RNA binding##BC067113|CSDC2|27254|cold shock domain containing C2, RNA binding##AL834417|CSDC2|27254|cold shock domain containing C2, RNA binding##AY092087|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK026524|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##AK129663|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_138338|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018050|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##NM_001018052|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##CR456459|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##CR456458|PPPDE2|27351|PPPDE peptidase domain containing 2##BC093956|PPPDE2|27351|PPPDE peptidase domain containing 2##BC112179|PPPDE2|27351|PPPDE peptidase domain containing 2##BC171724|PPPDE2|27351|PPPDE peptidase domain containing 2##AF038183|PPPDE2|27351|PPPDE peptidase domain containing 2##NM_015704|PPPDE2|27351|PPPDE peptidase domain containing 2##AK315618|XRCC6|2547|X-ray repair complementing defective repair in Chinese hamster cells 6##NM_001469|XRCC6|2547|X-ray repair complementing defective repair in Chinese hamster cells 6	0.0	
chr4	165893232	165893341	reg1042361.p1	3.598	+	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	-15135	+	TSC_hg19_v1_chr4_+_165878104 AK056221 NM_153027	-15184	+	AK289711 NM_001166373	-588880	-	BC089393 NM_001012414	5531	-	AK093201 AX747987 NM_152620	59864	+	CU690322 BC036301 BX648915 BX538029 TSC_hg19_v1_chr4_-_166033990	140675	-	BC022381|C4orf39|152756|chromosome 4 open reading frame 39##AK056221|C4orf39|152756|chromosome 4 open reading frame 39##NM_153027|C4orf39|152756|chromosome 4 open reading frame 39##AK289711|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##NM_001166373|MARCH1|55016|membrane-associated ring finger (C3HC4) 1##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61##AK093201|TRIM60|166655|tripartite motif containing 60##NM_152620|TRIM60|166655|tripartite motif containing 60##BC036301|TMEM192|201931|transmembrane protein 192##BX648915|TMEM192|201931|transmembrane protein 192##BX538029|TMEM192|201931|transmembrane protein 192	0.0	
chr4	66731343	66731448	reg1039633.p1	3.598	+	TSC_hg19_v1_chr4_-_66536182 AB209375	-195198	-	AK307826 NM_004439 NM_182472	-195743	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	-1456299	-	CU688992 TSC_hg19_v1_chr4_-_68411171	1679728	-	TSC_hg19_v1_chr4_-_68411224 BC030695 BX648166 BC041117 AK307928 AK308170 M95724	1679813	-	TSC_hg19_v1_chr4_-_68411282 NM_001812	1679883	-	AB209375|EPHA5|2044|EPH receptor A5##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC030695|CENPC1|1060|centromere protein C 1##BX648166|CENPC1|1060|centromere protein C 1##BC041117|CENPC1|1060|centromere protein C 1##AK307928|CENPC1|1060|centromere protein C 1##AK308170|CENPC1|1060|centromere protein C 1##M95724|CENPC1|1060|centromere protein C 1##NM_001812|CENPC1|1060|centromere protein C 1	0.861553	CTCF.p2:19:0.862
chr6	90502750	90502846	reg1030767.p1	3.598	+	EU831412 EU831505 TSC_hg19_v1_chr6_-_90348462 AL122090 BC104668 AK311948 BC009782 AK024783 NM_020466	-154335	-	NM_001242814 AK096867	-226173	+	NM_001242811 AK295731	-230721	+	TSC_hg19_v1_chr6_-_90529463 AF503925 NM_014611	26647	-	TSC_hg19_v1_chr6_-_90529484 AK124025	26708	-	TSC_hg19_v1_chr6_+_90539598 BC056685 NM_001137667 NM_001137668 NM_012115	36796	+	EU831412|LYRM2|57226|LYR motif containing 2##EU831505|LYRM2|57226|LYR motif containing 2##AL122090|LYRM2|57226|LYR motif containing 2##BC104668|LYRM2|57226|LYR motif containing 2##AK311948|LYRM2|57226|LYR motif containing 2##BC009782|LYRM2|57226|LYR motif containing 2##AK024783|LYRM2|57226|LYR motif containing 2##NM_020466|LYRM2|57226|LYR motif containing 2##NM_001242814|ANKRD6|22881|ankyrin repeat domain 6##AK096867|ANKRD6|22881|ankyrin repeat domain 6##NM_001242811|ANKRD6|22881|ankyrin repeat domain 6##AK295731|ANKRD6|22881|ankyrin repeat domain 6##AF503925|MDN1|23195|MDN1, midasin homolog (yeast)##NM_014611|MDN1|23195|MDN1, midasin homolog (yeast)##AK124025|MDN1|23195|MDN1, midasin homolog (yeast)##BC056685|CASP8AP2|9994|caspase 8 associated protein 2##NM_001137667|CASP8AP2|9994|caspase 8 associated protein 2##NM_001137668|CASP8AP2|9994|caspase 8 associated protein 2##NM_012115|CASP8AP2|9994|caspase 8 associated protein 2	0.0	
chr10	121463844	121463920	reg1035949.p1	3.597	+	TSC_hg19_v1_chr10_+_121411086 BC001445 AK291333 BC014656 DQ893416 DQ896772 CU675397 AB385565	-52746	+	TSC_hg19_v1_chr10_+_121411079 BC107786	-52807	+	TSC_hg19_v1_chr10_+_121411053 AL137582	-52829	+	TSC_hg19_v1_chr10_+_121485568 NM_001243195 NM_014937 AK307758	21656	+	TSC_hg19_v1_chr10_+_121485596 BC067820 AB023183	21732	+	TSC_hg19_v1_chr10_+_121485653 BC111493 BC052367 BC082755 AB385409	21823	+	AK291333|BAG3|9531|BCL2-associated athanogene 3##BC014656|BAG3|9531|BCL2-associated athanogene 3##DQ893416|BAG3|9531|BCL2-associated athanogene 3##DQ896772|BAG3|9531|BCL2-associated athanogene 3##BC107786|BAG3|9531|BCL2-associated athanogene 3##AL137582|BAG3|9531|BCL2-associated athanogene 3##NM_001243195|INPP5F|22876|inositol polyphosphate-5-phosphatase F##NM_014937|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK307758|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC067820|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AB023183|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC111493|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC052367|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC082755|INPP5F|22876|inositol polyphosphate-5-phosphatase F	0.0	
chr10	30876456	30876636	reg1033650.p1	3.597	+	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-153425	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-153607	+	TSC_hg19_v1_chr10_-_30638209 AB194709 AY364242 AK001348 AK225159 AK022188 NM_018109	-238313	-	AF139543 BC066294 NM_183058	42089	-	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	411906	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	444275	-	AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AB194709|MTPAP|55149|mitochondrial poly(A) polymerase##AY364242|MTPAP|55149|mitochondrial poly(A) polymerase##AK001348|MTPAP|55149|mitochondrial poly(A) polymerase##AK022188|MTPAP|55149|mitochondrial poly(A) polymerase##NM_018109|MTPAP|55149|mitochondrial poly(A) polymerase##AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438	0.0	
chr11	64808191	64808371	reg1031555.p1	3.597	+	NM_013306 NM_147777 TSC_hg19_v1_chr11_+_64794948 BC012767 BC014520 AK315642 AK315034 AF001435 BC009897 AF175267 AB527759 CU679523 AF175268 BT006631 AB209439	-13336	+	NM_001199745 NM_001667 AK223502 TSC_hg19_v1_chr11_+_64781642 BC002530 AK096447 L13687 EU832671 EU832750 AB527923 AK294580 AF493888 BT006674	-26650	+	AB463431 AK096702 HM134154 NM_138456	-43829	-	NM_013299 TSC_hg19_v1_chr11_+_64808377	100	+	TSC_hg19_v1_chr11_+_64808404 BC007448 U79266	137	+	AB527189 TSC_hg19_v1_chr11_-_64826007 AJ012371 NM_005468 BC143643 BC143644	17721	-	NM_013306|SNX15|29907|sorting nexin 15##NM_147777|SNX15|29907|sorting nexin 15##BC012767|SNX15|29907|sorting nexin 15##BC014520|SNX15|29907|sorting nexin 15##AK315642|SNX15|29907|sorting nexin 15##AK315034|SNX15|29907|sorting nexin 15##AF001435|SNX15|29907|sorting nexin 15##BC009897|SNX15|29907|sorting nexin 15##AF175267|SNX15|29907|sorting nexin 15##AF175268|SNX15|29907|sorting nexin 15##BT006631|SNX15|29907|sorting nexin 15##AB209439|SNX15|29907|sorting nexin 15##NM_001199745|ARL2|402|ADP-ribosylation factor-like 2##NM_001667|ARL2|402|ADP-ribosylation factor-like 2##AK223502|ARL2|402|ADP-ribosylation factor-like 2##BC002530|ARL2|402|ADP-ribosylation factor-like 2##AK096447|ARL2-SNX15|100528018|ARL2-SNX15 readthrough##L13687|ARL2|402|ADP-ribosylation factor-like 2##EU832671|ARL2|402|ADP-ribosylation factor-like 2##EU832750|ARL2|402|ADP-ribosylation factor-like 2##AK294580|ARL2|402|ADP-ribosylation factor-like 2##AF493888|ARL2|402|ADP-ribosylation factor-like 2##BT006674|ARL2|402|ADP-ribosylation factor-like 2##AK096702|BATF2|116071|basic leucine zipper transcription factor, ATF-like 2##HM134154|BATF2|116071|basic leucine zipper transcription factor, ATF-like 2##NM_138456|BATF2|116071|basic leucine zipper transcription factor, ATF-like 2##NM_013299|SAC3D1|29901|SAC3 domain containing 1##BC007448|SAC3D1|29901|SAC3 domain containing 1##U79266|SAC3D1|29901|SAC3 domain containing 1##AJ012371|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##NM_005468|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC143643|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC143644|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1	0.0	
chr1	34579095	34579172	reg1007332.p1	3.597	+	AK097707 NM_145205	-253058	+	NM_145238 AK131405 TSC_hg19_v1_chr1_+_33938251 AK290195 BC008827 BC011404	-640882	+	TSC_hg19_v1_chr1_-_33896604 AJ242730	-682525	-	TSC_hg19_v1_chr1_-_34630856 AB212622	51732	-	AY210418 NM_052896	52309	-	AK123355 NM_032884 BC007637	53466	+	AK097707|HMGB4|127540|high mobility group box 4##NM_145205|HMGB4|127540|high mobility group box 4##NM_145238|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK131405|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK290195|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC008827|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC011404|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AJ242730|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AB212622|CSMD2|114784|CUB and Sushi multiple domains 2##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2##AK123355|C1orf94|84970|chromosome 1 open reading frame 94##NM_032884|C1orf94|84970|chromosome 1 open reading frame 94##BC007637|C1orf94|84970|chromosome 1 open reading frame 94	0.520905	CTCF.p2:22:0.521
chr18	4182340	4182460	reg1038338.p2	3.597	+	AK294777 AK294717 NM_001242762 NM_001242763	-307673	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	-308116	-	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	-337070	-	AK304101 TSC_hg19_v1_chr18_-_4455255	272853	-	AK316099 NM_001242761 NM_004746 TSC_hg19_v1_chr18_-_4455271	272870	-	TSC_hg19_v1_chr18_-_5197257 NM_001145194	1014852	-	AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK304101|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK316099|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242761|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_004746|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42	1.563429	CTCF.p2:-15:0.976	CTCF.p2:60:0.587
chr19	16245616	16245796	reg1035569.p2	3.597	+	AY319652 NM_032855	-869	+	TSC_hg19_v1_chr19_-_16243033 AY927516	-2644	-	AK293676 TSC_hg19_v1_chr19_+_16222706 X56741 AF498943 BT007184 CR536583 CR542274 DQ892523 DQ895735 AB209767	-22984	+	TSC_hg19_v1_chr19_-_16250705 AK095221	4998	-	TSC_hg19_v1_chr19_+_16254533 AK027792 AK131222 AK300027 AK298682 AK307563 BC016826	8796	+	AB050868 BC069320 BC069428 BC069524 NM_054113 HQ258101 BC112200 BC113591	38604	-	AY319652|HSH2D|84941|hematopoietic SH2 domain containing##NM_032855|HSH2D|84941|hematopoietic SH2 domain containing##AK293676|RAB8A|4218|RAB8A, member RAS oncogene family##X56741|RAB8A|4218|RAB8A, member RAS oncogene family##AF498943|RAB8A|4218|RAB8A, member RAS oncogene family##BT007184|RAB8A|4218|RAB8A, member RAS oncogene family##CR536583|RAB8A|4218|RAB8A, member RAS oncogene family##CR542274|RAB8A|4218|RAB8A, member RAS oncogene family##DQ892523|RAB8A|4218|RAB8A, member RAS oncogene family##DQ895735|RAB8A|4218|RAB8A, member RAS oncogene family##AB209767|RAB8A|4218|RAB8A, member RAS oncogene family##AK027792|HSH2D|84941|hematopoietic SH2 domain containing##AK131222|HSH2D|84941|hematopoietic SH2 domain containing##AK300027|HSH2D|84941|hematopoietic SH2 domain containing##AK298682|HSH2D|84941|hematopoietic SH2 domain containing##AK307563|HSH2D|84941|hematopoietic SH2 domain containing##BC016826|HSH2D|84941|hematopoietic SH2 domain containing##AB050868|CIB3|117286|calcium and integrin binding family member 3##BC069320|CIB3|117286|calcium and integrin binding family member 3##BC069428|CIB3|117286|calcium and integrin binding family member 3##BC069524|CIB3|117286|calcium and integrin binding family member 3##NM_054113|CIB3|117286|calcium and integrin binding family member 3##HQ258101|CIB3|117286|calcium and integrin binding family member 3##BC112200|CIB3|117286|calcium and integrin binding family member 3##BC113591|CIB3|117286|calcium and integrin binding family member 3	0.0	
chr2	236711423	236711523	reg1027697.p1	3.597	+	TSC_hg19_v1_chr2_+_236403297 AB384114 AF413078	-308163	+	TSC_hg19_v1_chr2_+_236402950 BC140856	-308496	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	-308670	+	AK311262 TSC_hg19_v1_chr2_-_237076045	364541	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	365159	-	NM_212556 BX647589	461521	-	AF413078|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC140856|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18	0.0	
chr2	86464405	86464509	reg1029883.p1	3.597	+	NM_016622 NM_145644 TSC_hg19_v1_chr2_+_86426604 BC020651 AK074352 AK314555 AK314577 AF208849 AL832982 CU676602	-37873	+	NM_001100169 NM_001100170 NM_006839	-41565	-	TSC_hg19_v1_chr2_-_86422614 BX537369 L42572	-41802	-	AY562239 CR457301 CU687956 AK297201 TSC_hg19_v1_chr2_-_86564750 BC064846 AK294300 AK297359 AK297373 AK299334 AK023172 NM_001164731 NM_001164732 NM_022912	100276	-	AK297287 NM_001164730	100748	-	NM_018433	203813	+	NM_016622|MRPL35|51318|mitochondrial ribosomal protein L35##NM_145644|MRPL35|51318|mitochondrial ribosomal protein L35##BC020651|MRPL35|51318|mitochondrial ribosomal protein L35##AK074352|MRPL35|51318|mitochondrial ribosomal protein L35##AK314555|MRPL35|51318|mitochondrial ribosomal protein L35##AK314577|MRPL35|51318|mitochondrial ribosomal protein L35##AF208849|MRPL35|51318|mitochondrial ribosomal protein L35##AL832982|MRPL35|51318|mitochondrial ribosomal protein L35##NM_001100169|IMMT|10989|inner membrane protein, mitochondrial##NM_001100170|IMMT|10989|inner membrane protein, mitochondrial##NM_006839|IMMT|10989|inner membrane protein, mitochondrial##BX537369|IMMT|10989|inner membrane protein, mitochondrial##L42572|IMMT|10989|inner membrane protein, mitochondrial##AY562239|REEP1|65055|receptor accessory protein 1##CR457301|REEP1|65055|receptor accessory protein 1##AK297201|REEP1|65055|receptor accessory protein 1##BC064846|REEP1|65055|receptor accessory protein 1##AK294300|REEP1|65055|receptor accessory protein 1##AK297359|REEP1|65055|receptor accessory protein 1##AK297373|REEP1|65055|receptor accessory protein 1##AK299334|REEP1|65055|receptor accessory protein 1##AK023172|REEP1|65055|receptor accessory protein 1##NM_001164731|REEP1|65055|receptor accessory protein 1##NM_001164732|REEP1|65055|receptor accessory protein 1##NM_022912|REEP1|65055|receptor accessory protein 1##AK297287|REEP1|65055|receptor accessory protein 1##NM_001164730|REEP1|65055|receptor accessory protein 1##NM_018433|KDM3A|55818|lysine (K)-specific demethylase 3A	0.0	
chr3	5053257	5053406	reg1040730.p1	3.597	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-31977	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	-32150	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	-32215	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	110624	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	110760	+	TSC_hg19_v1_chr3_+_5229344 AK298511	175996	+	AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	0.0	
chr5	53675568	53675678	reg1032547.p1	3.597	+	TSC_hg19_v1_chr5_-_53606389 AK000058 AK290886 BC026093 NM_019087 AX772814 AK311482	-69221	-	TSC_hg19_v1_chr5_-_53606337 CR457225 CU693132	-69298	-	TSC_hg19_v1_chr5_+_52856474 AF020351 AK307973 CU675075	-819137	+	AK314215 NM_006308 U15590 Y17782 BC126272 BC132869 HQ258075 CR450314	75901	+	TSC_hg19_v1_chr5_+_53813588 AK304195 NM_001145427 BC060791 BC067860 NM_001102575 NM_052870	137922	+	TSC_hg19_v1_chr5_+_53813656 BC117218 BC117220	138050	+	AK000058|ARL15|54622|ADP-ribosylation factor-like 15##AK290886|ARL15|54622|ADP-ribosylation factor-like 15##BC026093|ARL15|54622|ADP-ribosylation factor-like 15##NM_019087|ARL15|54622|ADP-ribosylation factor-like 15##AK311482|ARL15|54622|ADP-ribosylation factor-like 15##CR457225|ARL15|54622|ADP-ribosylation factor-like 15##AF020351|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK307973|NDUFS4|4724|NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)##AK314215|HSPB3|8988|heat shock 27kDa protein 3##NM_006308|HSPB3|8988|heat shock 27kDa protein 3##U15590|HSPB3|8988|heat shock 27kDa protein 3##Y17782|HSPB3|8988|heat shock 27kDa protein 3##BC126272|HSPB3|8988|heat shock 27kDa protein 3##BC132869|HSPB3|8988|heat shock 27kDa protein 3##HQ258075|HSPB3|8988|heat shock 27kDa protein 3##CR450314|HSPB3|8988|heat shock 27kDa protein 3##AK304195|SNX18|112574|sorting nexin 18##NM_001145427|SNX18|112574|sorting nexin 18##BC060791|SNX18|112574|sorting nexin 18##BC067860|SNX18|112574|sorting nexin 18##NM_001102575|SNX18|112574|sorting nexin 18##NM_052870|SNX18|112574|sorting nexin 18##BC117218|SNX18|112574|sorting nexin 18##BC117220|SNX18|112574|sorting nexin 18	0.893155	CTCF.p2:14:0.893
chr5	86491035	86491152	reg1039634.p2	3.597	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	-577276	+	TSC_hg19_v1_chr5_+_85913757 AK026505	-577335	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-2810429	-	TSC_hg19_v1_chr5_+_86563706 CR749722	72592	+	TSC_hg19_v1_chr5_+_86563831 BC131816	72733	+	TSC_hg19_v1_chr5_+_86564085 AB209106 NM_002890 BC033015	72973	+	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.0	
chr7	128070491	128070643	reg1021819.p2	3.597	+	TSC_hg19_v1_chr7_-_128050037 AK092452 BC033622 AK054667 AK122994 NM_000883 NM_001102605 NM_001142576 NM_183243	-20530	-	AK131294 TSC_hg19_v1_chr7_-_128049984 CR933672	-20587	-	AK054640 AK293413 AK297943 TSC_hg19_v1_chr7_-_128046013 NM_001142573 NM_001142574 NM_001142575	-24550	-	TSC_hg19_v1_chr7_+_128095931 NM_001098786 NM_013332 AF144755 AK024729 AK222583 BC008573 BC001863 BC093742 BC112183	25399	+	NM_018396 TSC_hg19_v1_chr7_+_128116813 AK302775 BC107586 AK002212 BC064929 BC121115 BC121116 AK299960	46270	+	BC066973 NM_001012454 NM_001128926 BC105729 BC105730 BC105731 BC047310	241779	+	AK092452|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##BC033622|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054667|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK122994|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_000883|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001102605|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142576|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_183243|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK131294|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##CR933672|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK054640|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK293413|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##AK297943|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142573|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142574|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001142575|IMPDH1|3614|IMP (inosine 5'-monophosphate) dehydrogenase 1##NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated##AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_018396|METTL2B|55798|methyltransferase like 2B##AK302775|METTL2B|55798|methyltransferase like 2B##BC107586|METTL2B|55798|methyltransferase like 2B##AK002212|METTL2B|55798|methyltransferase like 2B##BC064929|METTL2B|55798|methyltransferase like 2B##BC121115|METTL2B|55798|methyltransferase like 2B##BC121116|METTL2B|55798|methyltransferase like 2B##AK299960|METTL2B|55798|methyltransferase like 2B##BC066973|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001012454|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001128926|FAM71F2|346653|family with sequence similarity 71, member F2##BC105729|FAM71F2|346653|family with sequence similarity 71, member F2##BC105730|FAM71F2|346653|family with sequence similarity 71, member F2##BC105731|FAM71F2|346653|family with sequence similarity 71, member F2##BC047310|FAM71F2|346653|family with sequence similarity 71, member F2	0.0	
chr7	148790352	148790511	reg1026079.p1	3.597	+	TSC_hg19_v1_chr7_-_148787872 NM_152411	-2531	-	TSC_hg19_v1_chr7_-_148787844 BX647929 AK095701	-2598	-	AB463377 AM392873 AM392921 TSC_hg19_v1_chr7_-_148787811 BC109245 BC128392 AL834510 AK297472	-2659	-	TSC_hg19_v1_chr7_-_148823339 AK125575 BC125189 AK056498 AY621067	32906	-	TSC_hg19_v1_chr7_-_148823395 NM_001001661	32982	-	TSC_hg19_v1_chr7_+_148823499 AY049743 NM_020781	33071	+	NM_152411|ZNF786|136051|zinc finger protein 786##BX647929|ZNF786|136051|zinc finger protein 786##AK095701|ZNF786|136051|zinc finger protein 786##AM392873|ZNF786|136051|zinc finger protein 786##AM392921|ZNF786|136051|zinc finger protein 786##BC109245|ZNF786|136051|zinc finger protein 786##BC128392|ZNF786|136051|zinc finger protein 786##AL834510|ZNF786|136051|zinc finger protein 786##AK297472|ZNF786|136051|zinc finger protein 786##BC125189|ZNF425|155054|zinc finger protein 425##AK056498|ZNF425|155054|zinc finger protein 425##AY621067|ZNF425|155054|zinc finger protein 425##NM_001001661|ZNF425|155054|zinc finger protein 425##AY049743|ZNF398|57541|zinc finger protein 398##NM_020781|ZNF398|57541|zinc finger protein 398	0.0	
chr7	154201188	154201310	reg1030539.p1	3.597	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	-198864	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	-451491	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	-616849	+	TSC_hg19_v1_chr7_+_154720213 BC033053 AK311721 AK056609 BC050402	518948	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	593421	-	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	593962	+	AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##BC033053|LOC100132707|100132707|uncharacterized LOC100132707##AK311721|LOC100132707|100132707|uncharacterized LOC100132707##AK056609|LOC100132707|100132707|uncharacterized LOC100132707##BC050402|LOC100132707|100132707|uncharacterized LOC100132707##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781	0.999738	CTCF.p2:-5:1.000
chr8	38628041	38628143	reg1022704.p2	3.597	+	AY072874 AY072875 TSC_hg19_v1_chr8_+_38614814 AK308849	-13306	+	BX647696 NM_001146216	-42389	+	BC137511 BC137512 BC139744 AK125570 NM_207412	-241916	-	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	16630	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	16676	+	AK098787 NM_021623 TSC_hg19_v1_chr8_+_38758793 AK296068 AK291842 AF286164	130719	+	AY072874|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072875|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK308849|TACC1|6867|transforming, acidic coiled-coil containing protein 1##BX647696|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001146216|TACC1|6867|transforming, acidic coiled-coil containing protein 1##BC137511|C8orf86|389649|chromosome 8 open reading frame 86##BC137512|C8orf86|389649|chromosome 8 open reading frame 86##BC139744|C8orf86|389649|chromosome 8 open reading frame 86##AK125570|C8orf86|389649|chromosome 8 open reading frame 86##NM_207412|C8orf86|389649|chromosome 8 open reading frame 86##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2	0.0	
chr9	129861816	129861972	reg1033732.p1	3.597	+	AF221098 NM_001190728 AB385313 CU689706	-137359	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	-184790	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	-238950	+	AK075026 TSC_hg19_v1_chr9_-_129870392	8458	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	23014	-	TSC_hg19_v1_chr9_-_129884962 AK312876	23068	-	AF221098|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190728|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AK075026|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2	0.0	
chr10	77054725	77054904	reg1043759.p1	3.596	+	TSC_hg19_v1_chr10_-_76995794 CU690500 BC023663 AK302283 AK074421 AY358476 BC047774 NM_144589 AK290452	-59043	-	BC012883 L08666 TSC_hg19_v1_chr10_+_76970608	-84204	+	TSC_hg19_v1_chr10_+_76970563 BC000165 BC072407 AK315919 AK296635	-84260	+	TSC_hg19_v1_chr10_-_77159861 AK092897 AX747796	105131	-	AK127647 TSC_hg19_v1_chr10_-_77160688	105856	-	TSC_hg19_v1_chr10_-_77161142 CU680472 EU446545 BC013011 BC021165	106396	-	BC023663|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK302283|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK074421|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AY358476|COMTD1|118881|catechol-O-methyltransferase domain containing 1##BC047774|COMTD1|118881|catechol-O-methyltransferase domain containing 1##NM_144589|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK290452|COMTD1|118881|catechol-O-methyltransferase domain containing 1##BC012883|VDAC2|7417|voltage-dependent anion channel 2##L08666|VDAC2|7417|voltage-dependent anion channel 2##BC000165|VDAC2|7417|voltage-dependent anion channel 2##BC072407|VDAC2|7417|voltage-dependent anion channel 2##AK315919|VDAC2|7417|voltage-dependent anion channel 2##AK296635|VDAC2|7417|voltage-dependent anion channel 2##AK092897|ZNF503|84858|zinc finger protein 503##AK127647|ZNF503|84858|zinc finger protein 503##EU446545|ZNF503|84858|zinc finger protein 503##BC013011|ZNF503|84858|zinc finger protein 503##BC021165|ZNF503|84858|zinc finger protein 503	0.0	
chr11	17994724	17994834	reg1043332.p1	3.596	+	NM_001112741 NM_004976 AB529092	-237260	+	NM_002478 AK314968 TSC_hg19_v1_chr11_+_17741117 BC000353 X56677 BC064493 AB463907 BT007157	-253560	+	CU677569 TSC_hg19_v1_chr11_-_17565964 AK290788 AK300936 AB018687 BC016057 AF039699 AF039700 AK225614 NM_005709 NM_153676	-428862	-	TSC_hg19_v1_chr11_-_18034463 AK294022	39671	-	TSC_hg19_v1_chr11_-_18034595 AJ243950 AJ243951 BC000707 NM_012139	39784	-	BC065375 AK292286 TSC_hg19_v1_chr11_-_18034745	39937	-	NM_001112741|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_004976|KCNC1|3746|potassium voltage-gated channel, Shaw-related subfamily, member 1##NM_002478|MYOD1|4654|myogenic differentiation 1##AK314968|MYOD1|4654|myogenic differentiation 1##X56677|MYOD1|4654|myogenic differentiation 1##BC064493|MYOD1|4654|myogenic differentiation 1##BT007157|MYOD1|4654|myogenic differentiation 1##AK290788|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK300936|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AB018687|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##BC016057|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039699|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AF039700|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK225614|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_005709|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##NM_153676|USH1C|10083|Usher syndrome 1C (autosomal recessive, severe)##AK294022|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243950|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AJ243951|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC000707|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##NM_012139|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##BC065375|SERGEF|26297|secretion regulating guanine nucleotide exchange factor##AK292286|SERGEF|26297|secretion regulating guanine nucleotide exchange factor	0.678825	CTCF.p2:12:0.679
chr1	150437084	150437191	reg1007009.p2	3.596	+	TSC_hg19_v1_chr1_+_150337184 AK291703 AK304380 AK056707 AK308148 AF161362 BC045623 AB007929 EU832460 EU832492 EU832542 EU832573 AB527168	-99915	+	NM_015203 TSC_hg19_v1_chr1_+_150337109	-100081	+	TSC_hg19_v1_chr1_+_150336622 BX641025	-100492	+	TSC_hg19_v1_chr1_+_150459910 AK298773 AK022590 BC000541 AK315507 AK222814 AY450558	22755	+	TSC_hg19_v1_chr1_+_150459916 AK225368 BC009997 NM_025150 AB384782 BC007824	22795	+	NM_001202858 NM_004425 NM_022664 TSC_hg19_v1_chr1_+_150480582 AK097205 AK097046 BC023505 DQ010946 DQ112074 U68186 U68187	43397	+	AK291703|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AK304380|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AK056707|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AK308148|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AF161362|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##BC045623|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AB007929|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##EU832460|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##EU832492|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##EU832542|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##EU832573|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##NM_015203|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##BX641025|RPRD2|23248|regulation of nuclear pre-mRNA domain containing 2##AK298773|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AK022590|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##BC000541|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AK315507|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AK222814|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AY450558|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##AK225368|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##BC009997|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##NM_025150|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##BC007824|TARS2|80222|threonyl-tRNA synthetase 2, mitochondrial (putative)##NM_001202858|ECM1|1893|extracellular matrix protein 1##NM_004425|ECM1|1893|extracellular matrix protein 1##NM_022664|ECM1|1893|extracellular matrix protein 1##AK097205|ECM1|1893|extracellular matrix protein 1##AK097046|ECM1|1893|extracellular matrix protein 1##BC023505|ECM1|1893|extracellular matrix protein 1##U68186|ECM1|1893|extracellular matrix protein 1##U68187|ECM1|1893|extracellular matrix protein 1	0.0	
chr1	234744255	234744348	reg1031104.p2	3.596	+	TSC_hg19_v1_chr1_-_234743861 AK309579	-443	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-470	-	TSC_hg19_v1_chr1_-_234743489 BC020516	-775	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	945	-	TSC_hg19_v1_chr1_-_234895746 AF193050	151473	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	547788	-	BC020516|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.0	
chr1	28415399	28415466	reg1042655.p2	3.596	+	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-308	-	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-128914	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-153871	+	NM_000952 NM_001164723	88022	-	S52624 AK292053 NM_001164721 NM_001164722	104980	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	144099	-	BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8	0.0	
chr13	78081107	78081202	reg1026749.p1	3.596	+	NM_015057 TSC_hg19_v1_chr13_-_77901230	-179951	-	TSC_hg19_v1_chr13_-_77601303 AK314442 NM_012158	-479823	-	TSC_hg19_v1_chr13_-_77601295 AL833187 BC063796 BC072448	-479872	-	NM_001160706 NM_003843 NM_144777 BC020726 AF045941 AK025320 AK222720 AK301659	28697	+	TSC_hg19_v1_chr13_+_78271822 NM_001242868	190750	+	AK294201 NM_001040153	191861	+	NM_015057|MYCBP2|23077|MYC binding protein 2##AK314442|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_012158|FBXL3|26224|F-box and leucine-rich repeat protein 3##AL833187|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC063796|FBXL3|26224|F-box and leucine-rich repeat protein 3##BC072448|FBXL3|26224|F-box and leucine-rich repeat protein 3##NM_001160706|SCEL|8796|sciellin##NM_003843|SCEL|8796|sciellin##NM_144777|SCEL|8796|sciellin##BC020726|SCEL|8796|sciellin##AF045941|SCEL|8796|sciellin##AK025320|SCEL|8796|sciellin##AK222720|SCEL|8796|sciellin##AK301659|SCEL|8796|sciellin##NM_001242868|SLAIN1|122060|SLAIN motif family, member 1##AK294201|SLAIN1|122060|SLAIN motif family, member 1##NM_001040153|SLAIN1|122060|SLAIN motif family, member 1	0.10839	
chr16	46722448	46722624	reg1040034.p2	3.596	+	TSC_hg19_v1_chr16_-_46655304 NM_024745	-67230	-	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	-67264	-	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-13460403	+	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	526	-	TSC_hg19_v1_chr16_-_46723112 NM_018206	591	-	BC050725 NM_014321 AK024019 TSC_hg19_v1_chr16_+_46723570 AK024077	1029	+	NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##NM_018206|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC050725|ORC6|23594|origin recognition complex, subunit 6##NM_014321|ORC6|23594|origin recognition complex, subunit 6##AK024019|ORC6|23594|origin recognition complex, subunit 6##AK024077|ORC6|23594|origin recognition complex, subunit 6	0.0	
chr17_ctg5_hap1	841019	841120	reg1042253.p1	3.596	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.390513	CTCF.p2:-13:0.391
chr18	60805244	60805351	reg1038423.p1	3.596	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-9362	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-420989	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-421371	+	BC027258 NM_000633 NM_000657	181263	-	TSC_hg19_v1_chr18_-_60986977 X06487	181696	-	TSC_hg19_v1_chr18_-_60987309 M13994	181989	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr3	142899381	142899504	reg1041663.p1	3.596	+	BC067737 TSC_hg19_v1_chr3_+_142895211	-4271	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-60791	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-179012	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	667825	-	NM_173552 AK315082	791210	+	TSC_hg19_v1_chr3_+_143690915 BC037293	791548	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58	0.0	
chr3	178417643	178417767	reg1037855.p1	3.596	+	AF209747 NM_005832	-141153	+	BC017825 NM_181361	-163482	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1502646	-	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	371860	-	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	371921	-	TSC_hg19_v1_chr3_+_178866144 NM_006218 AK292940	448533	+	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3##NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	0.0	
chr3	189272818	189272884	reg1033002.p2	3.596	+	AK125682 NM_198485 BC101550 BC101552	-383040	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-607881	+	NM_001167671 BC130584 BC144076	-1329617	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	76408	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	234667	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	565844	-	AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1	0.0	
chr5	149156599	149156754	reg1031413.p1	3.596	+	AK123614 NM_001172699	-5174	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	-46800	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	-46849	+	BC144044 BC035909 AB593141 M26061 NM_000440	167642	-	TSC_hg19_v1_chr5_+_149340320 NM_000112	183632	+	TSC_hg19_v1_chr5_+_149340352 AK312596	183675	+	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144044|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##BC035909|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##AB593141|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##M26061|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000440|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2	0.0	
chr8	11416174	11416263	reg1032686.p1	3.596	+	S76617 NM_001715 BC018703 BC004473 BC038555	-64625	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-91989	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-211214	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	145502	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	211050	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	243966	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.0	
chr9	102574036	102574163	reg1028831.p1	3.596	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-589512	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-589856	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-589882	-	TSC_hg19_v1_chr9_-_102582187 AK057451	8066	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	10058	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	94828	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.0	
chr9	75105318	75105425	reg1034025.p2	3.596	+	TSC_hg19_v1_chr9_-_74980125 AF062346 BC011018 BC027707 NM_001102420 NM_001102421 NM_006007	-125271	-	AK025782 BC073131 TSC_hg19_v1_chr9_-_74979791	-125646	-	TSC_hg19_v1_chr9_+_74920350 AK095210	-185020	+	AF417578 NM_138691	31345	+	AB587538 AF003341 AY390731 BT006921 DQ890669 DQ893850 BC001505 TSC_hg19_v1_chr9_-_75567970 AB209821 AK000118 AK026641 AK302168	462574	-	NM_000689	462861	-	AF062346|ZFAND5|7763|zinc finger, AN1-type domain 5##BC011018|ZFAND5|7763|zinc finger, AN1-type domain 5##BC027707|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102420|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_001102421|ZFAND5|7763|zinc finger, AN1-type domain 5##NM_006007|ZFAND5|7763|zinc finger, AN1-type domain 5##AK025782|ZFAND5|7763|zinc finger, AN1-type domain 5##BC073131|ZFAND5|7763|zinc finger, AN1-type domain 5##AF417578|TMC1|117531|transmembrane channel-like 1##NM_138691|TMC1|117531|transmembrane channel-like 1##AF003341|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AY390731|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BT006921|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ890669|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##DQ893850|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##BC001505|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AB209821|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK000118|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK026641|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##AK302168|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1##NM_000689|ALDH1A1|216|aldehyde dehydrogenase 1 family, member A1	0.0	
chr10	17496561	17496652	reg1037532.p1	3.595	+	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	-241	-	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	-392	-	TSC_hg19_v1_chr10_-_17271978 BC078172	-224620	-	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	162767	-	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	189624	+	NM_001098844 BC157856	297648	+	BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236	0.0	
chr10	44459757	44459823	reg1033695.p2	3.595	+	TSC_hg19_v1_chr10_-_44144330 U69645 AK312132 NM_006973 AK309483	-315484	-	NM_001005368 TSC_hg19_v1_chr10_-_44144248	-315585	-	TSC_hg19_v1_chr10_+_44101888 BX648149	-357893	+	CR450283 AB385200 AB463489 DQ345518 DQ345517 DQ345519 DQ345520 AY644456 BC039893 U16752 AY874118 L36033 L36034 TSC_hg19_v1_chr10_-_44880546 BC031072 AK311814 AK292628 NM_000609 NM_001033886 NM_001178134 NM_199168	420709	-	BX538120 BC127789 BC127790 NM_001123376 AB235418	946928	+	AK056518 TSC_hg19_v1_chr10_-_45455156	995357	-	U69645|ZNF32|7580|zinc finger protein 32##AK312132|ZNF32|7580|zinc finger protein 32##NM_006973|ZNF32|7580|zinc finger protein 32##NM_001005368|ZNF32|7580|zinc finger protein 32##BX648149|ZNF485|220992|zinc finger protein 485##CR450283|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345518|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345517|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345519|CXCL12|6387|chemokine (C-X-C motif) ligand 12##DQ345520|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY644456|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC039893|CXCL12|6387|chemokine (C-X-C motif) ligand 12##U16752|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AY874118|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36033|CXCL12|6387|chemokine (C-X-C motif) ligand 12##L36034|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BC031072|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK311814|CXCL12|6387|chemokine (C-X-C motif) ligand 12##AK292628|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_000609|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001033886|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_001178134|CXCL12|6387|chemokine (C-X-C motif) ligand 12##NM_199168|CXCL12|6387|chemokine (C-X-C motif) ligand 12##BX538120|TMEM72|643236|transmembrane protein 72##BC127789|TMEM72|643236|transmembrane protein 72##BC127790|TMEM72|643236|transmembrane protein 72##NM_001123376|TMEM72|643236|transmembrane protein 72##AB235418|TMEM72|643236|transmembrane protein 72##AK056518|TMEM72-AS1|220980|TMEM72 antisense RNA 1 (non-protein coding)	0.0	
chr13	31439770	31439837	reg1006006.p2	3.595	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	-130088	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	-130139	+	AK314143 NM_001204406	-152189	+	NM_032849 AK055635 TSC_hg19_v1_chr13_+_31480407 AL832478 BC040165 BC101624 BC101626 CU691826	40677	+	TSC_hg19_v1_chr13_+_31506809 BC030277 NM_152325 CU688876	67027	+	CU691504 DQ891727 DQ894904 AF039695 TSC_hg19_v1_chr13_-_31735849	295991	-	BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_032849|C13orf33|84935|chromosome 13 open reading frame 33##AK055635|C13orf33|84935|chromosome 13 open reading frame 33##BC040165|C13orf33|84935|chromosome 13 open reading frame 33##BC101624|C13orf33|84935|chromosome 13 open reading frame 33##BC101626|C13orf33|84935|chromosome 13 open reading frame 33##BC030277|C13orf26|122046|chromosome 13 open reading frame 26##NM_152325|C13orf26|122046|chromosome 13 open reading frame 26##DQ891727|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ894904|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AF039695|HSPH1|10808|heat shock 105kDa/110kDa protein 1	0.0	
chr15	66764559	66764656	reg1041380.p1	3.595	+	TSC_hg19_v1_chr15_+_66694219 AK294322	-70390	+	TSC_hg19_v1_chr15_+_66679272 AK291500 AK312356	-85334	+	TSC_hg19_v1_chr15_+_66679214 NM_002755	-85445	+	AF093593 AB464224 AK292051 TSC_hg19_v1_chr15_-_66790104 BC014315 AK024763 AK312018 NM_006049	25499	-	L20868 BC005817 BC009888 BC014653 BC010151 BC007996 BC040610 AB208977 BC001365 BC018840 BC095427 TSC_hg19_v1_chr15_-_66797186 AK297490 AK291117 AK297484 AK130784 AK223057 AK291859 AK294113 AK298224 BC066925 D23660 NM_000968	32565	-	AK023175 NM_017975 BX640701	32835	+	AK294322|MAP2K1|5604|mitogen-activated protein kinase kinase 1##AK291500|MAP2K1|5604|mitogen-activated protein kinase kinase 1##AK312356|MAP2K1|5604|mitogen-activated protein kinase kinase 1##NM_002755|MAP2K1|5604|mitogen-activated protein kinase kinase 1##AF093593|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##AK292051|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##BC014315|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##AK024763|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##AK312018|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##NM_006049|SNAPC5|10302|small nuclear RNA activating complex, polypeptide 5, 19kDa##L20868|RPL4|6124|ribosomal protein L4##BC005817|RPL4|6124|ribosomal protein L4##BC009888|RPL4|6124|ribosomal protein L4##BC014653|RPL4|6124|ribosomal protein L4##BC010151|RPL4|6124|ribosomal protein L4##BC007996|RPL4|6124|ribosomal protein L4##BC040610|RPL4|6124|ribosomal protein L4##AB208977|RPL4|6124|ribosomal protein L4##BC001365|RPL4|6124|ribosomal protein L4##BC018840|RPL4|6124|ribosomal protein L4##BC095427|RPL4|6124|ribosomal protein L4##AK291117|RPL4|6124|ribosomal protein L4##AK297484|RPL4|6124|ribosomal protein L4##AK130784|RPL4|6124|ribosomal protein L4##AK223057|RPL4|6124|ribosomal protein L4##AK291859|RPL4|6124|ribosomal protein L4##AK294113|RPL4|6124|ribosomal protein L4##BC066925|RPL4|6124|ribosomal protein L4##D23660|RPL4|6124|ribosomal protein L4##NM_000968|RPL4|6124|ribosomal protein L4##AK023175|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##NM_017975|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BX640701|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)	0.0	
chr16	30406998	30407092	reg1036900.p1	3.595	+	TSC_hg19_v1_chr16_+_30406725 NM_152652	-304	+	NM_001214909	-613	+	AK303390 NM_052838	-12894	-	TSC_hg19_v1_chr16_+_30418616 AK313930 NM_001142305 NM_016643	11610	+	TSC_hg19_v1_chr16_+_30418926 BC026192 AK311157 AK001405 BC011870	11996	+	TSC_hg19_v1_chr16_+_30419371 AF242768	12374	+	NM_152652|ZNF48|197407|zinc finger protein 48##NM_001214909|ZNF48|197407|zinc finger protein 48##AK303390|SEPT1|1731|septin 1##NM_052838|SEPT1|1731|septin 1##AK313930|ZNF771|51333|zinc finger protein 771##NM_001142305|ZNF771|51333|zinc finger protein 771##NM_016643|ZNF771|51333|zinc finger protein 771##BC026192|ZNF771|51333|zinc finger protein 771##BC011870|ZNF771|51333|zinc finger protein 771##AF242768|ZNF771|51333|zinc finger protein 771	1.074706	CTCF.p2:-16:0.998
chr16	67118346	67118463	reg1038529.p1	3.595	+	TSC_hg19_v1_chr16_+_67063217 AK290462 AK291834 AB463544 AF294326 BT006862 CU676254 DQ890558 DQ893719 L20298 AK311724	-55116	+	TSC_hg19_v1_chr16_+_67063051 BC018509 NM_001755 NM_022845	-55357	+	NM_001190201 NM_001190202 TSC_hg19_v1_chr16_+_67034441 AK094783 AK300792 AK295483 BC041823 BC064573	-83856	+	TSC_hg19_v1_chr16_+_67143864 AF176088 BC004556 NM_025187	25450	+	TSC_hg19_v1_chr16_+_67143927 CU678768	25598	+	AY358485 TSC_hg19_v1_chr16_-_67184866 BC012191 NM_033309	66462	-	AK290462|CBFB|865|core-binding factor, beta subunit##AK291834|CBFB|865|core-binding factor, beta subunit##AF294326|CBFB|865|core-binding factor, beta subunit##BT006862|CBFB|865|core-binding factor, beta subunit##DQ890558|CBFB|865|core-binding factor, beta subunit##DQ893719|CBFB|865|core-binding factor, beta subunit##L20298|CBFB|865|core-binding factor, beta subunit##AK311724|CBFB|865|core-binding factor, beta subunit##BC018509|CBFB|865|core-binding factor, beta subunit##NM_001755|CBFB|865|core-binding factor, beta subunit##NM_022845|CBFB|865|core-binding factor, beta subunit##NM_001190201|CES4A|283848|carboxylesterase 4A##NM_001190202|CES4A|283848|carboxylesterase 4A##AK094783|CES4A|283848|carboxylesterase 4A##AK300792|CES4A|283848|carboxylesterase 4A##AK295483|CES4A|283848|carboxylesterase 4A##BC041823|CES4A|283848|carboxylesterase 4A##BC064573|CES4A|283848|carboxylesterase 4A##AF176088|C16orf70|80262|chromosome 16 open reading frame 70##BC004556|C16orf70|80262|chromosome 16 open reading frame 70##NM_025187|C16orf70|80262|chromosome 16 open reading frame 70##AY358485|B3GNT9|84752|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9##BC012191|B3GNT9|84752|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9##NM_033309|B3GNT9|84752|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9	0.0	
chr16	71456026	71456137	reg1033554.p1	3.595	+	TSC_hg19_v1_chr16_+_71392648 BC015484 X56667	-63437	+	NM_001740 NM_007088 AK222495 AK222648 AK291096 TSC_hg19_v1_chr16_+_71392625	-63460	+	BC034468 TSC_hg19_v1_chr16_-_71323306 AK226169 BX648660 AK315056 NM_001099642 AK123343 AF458590 NM_018348 BC035005	-132780	-	TSC_hg19_v1_chr16_-_71496127 AF507946 BC007256 NM_145911 BC048974 AK091039 AX746746 AK297130	40040	-	AK123826 TSC_hg19_v1_chr16_+_71496196	40107	+	AK292260 BC030658 AK057330 BC047091 NM_006961	67134	-	BC015484|CALB2|794|calbindin 2##X56667|CALB2|794|calbindin 2##NM_001740|CALB2|794|calbindin 2##NM_007088|CALB2|794|calbindin 2##AK222495|CALB2|794|calbindin 2##AK222648|CALB2|794|calbindin 2##AK291096|CALB2|794|calbindin 2##BC034468|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK226169|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BX648660|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AK315056|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_001099642|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AF458590|FTSJD1|55783|FtsJ methyltransferase domain containing 1##NM_018348|FTSJD1|55783|FtsJ methyltransferase domain containing 1##BC035005|FTSJD1|55783|FtsJ methyltransferase domain containing 1##AF507946|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC007256|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_145911|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC048974|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK091039|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK297130|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19	0.874105	CTCF.p2:35:0.874
chr18	2656484	2656594	reg1034897.p2	3.595	+	BC006008 NM_015295 TSC_hg19_v1_chr18_+_2655885	-625	+	TSC_hg19_v1_chr18_+_2571589 AF017790	-84944	+	NM_006101 BC005239 TSC_hg19_v1_chr18_+_2571579 AK289396 AK313184 BC035617 BC010171	-84994	+	TSC_hg19_v1_chr18_+_2847006 AF270513 NM_032048 BC032231 BC136541	190492	+	AB026706 TSC_hg19_v1_chr18_+_2907037	250462	+	BC152448 D87436 NM_014646	355405	-	BC006008|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##NM_015295|SMCHD1|23347|structural maintenance of chromosomes flexible hinge domain containing 1##AF017790|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##NM_006101|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC005239|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK289396|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK313184|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC035617|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC010171|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AF270513|EMILIN2|84034|elastin microfibril interfacer 2##NM_032048|EMILIN2|84034|elastin microfibril interfacer 2##BC032231|EMILIN2|84034|elastin microfibril interfacer 2##BC136541|EMILIN2|84034|elastin microfibril interfacer 2##AB026706|EMILIN2|84034|elastin microfibril interfacer 2##BC152448|LPIN2|9663|lipin 2##D87436|LPIN2|9663|lipin 2##NM_014646|LPIN2|9663|lipin 2	0.0	
chr19	6517239	6517408	reg1006516.p2	3.595	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-15006	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-35540	-	NM_139161 NM_174881 AK292956 AF503290 AY358684 BC018409 AK000653	-53039	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	13703	+	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	73709	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	73783	-	EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##NM_139161|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_174881|CRB3|92359|crumbs homolog 3 (Drosophila)##AK292956|CRB3|92359|crumbs homolog 3 (Drosophila)##AF503290|CRB3|92359|crumbs homolog 3 (Drosophila)##AY358684|CRB3|92359|crumbs homolog 3 (Drosophila)##BC018409|CRB3|92359|crumbs homolog 3 (Drosophila)##AK000653|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule	0.0	
chr20	57278461	57278559	reg1042170.p1	3.595	+	TSC_hg19_v1_chr20_+_57267908 NM_024663 BC020507 AK223094 AK021645 AK315684	-10625	+	NM_001204872 NM_001204873 AK297667 AK307771	-14322	+	TSC_hg19_v1_chr20_+_57226873 BC019042 AF008935 AF008936 AF008937 BC073876 AF038897 AF428146 AK026970	-51519	+	TSC_hg19_v1_chr20_+_57288781 AX721181	10333	+	TSC_hg19_v1_chr20_+_57414737 AK314549	136230	+	TSC_hg19_v1_chr20_+_57414770 BC036081	136264	+	NM_024663|NPEPL1|79716|aminopeptidase-like 1##BC020507|NPEPL1|79716|aminopeptidase-like 1##AK223094|NPEPL1|79716|aminopeptidase-like 1##AK021645|NPEPL1|79716|aminopeptidase-like 1##AK315684|NPEPL1|79716|aminopeptidase-like 1##NM_001204872|NPEPL1|79716|aminopeptidase-like 1##NM_001204873|NPEPL1|79716|aminopeptidase-like 1##AK297667|NPEPL1|79716|aminopeptidase-like 1##AK307771|NPEPL1|79716|aminopeptidase-like 1##BC019042|STX16|8675|syntaxin 16##AF008935|STX16|8675|syntaxin 16##AF008936|STX16|8675|syntaxin 16##AF008937|STX16|8675|syntaxin 16##BC073876|STX16|8675|syntaxin 16##AF038897|STX16|8675|syntaxin 16##AF428146|STX16|8675|syntaxin 16##AK026970|STX16|8675|syntaxin 16##AK314549|GNAS|2778|GNAS complex locus##BC036081|GNAS|2778|GNAS complex locus	0.056503	
chr2	108786608	108786695	reg1040819.p1	3.595	+	AK315280 AB084377 AK300801 AB043997 NM_021815 BC111525 BC111524	-183649	+	NM_182588 TSC_hg19_v1_chr2_+_108443399	-343257	+	TSC_hg19_v1_chr2_-_107503517 AX795200 AB059555 BC008680 AK307784 NM_001142352 NM_032528 FJ433883	-1283105	-	AB528243 NM_001008743	76999	+	AF186252 AF186255 NM_001056 NM_176825 AF186251 AF186254 AK297086 AK313193 AK298306 U66036 AF186253 AF186256 AB008164 AF026303 BC005353	118634	+	BC058861 NM_006588 AK298755 AF055584 AK297851 BC125043	207852	+	AK315280|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB084377|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AK300801|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##AB043997|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_021815|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111525|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##BC111524|SLC5A7|60482|solute carrier family 5 (choline transporter), member 7##NM_182588|RGPD4|285190|RANBP2-like and GRIP domain containing 4##AB059555|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##BC008680|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##AK307784|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142352|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_032528|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001008743|SULT1C3|442038|sulfotransferase family, cytosolic, 1C, member 3##AF186252|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186255|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_001056|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##NM_176825|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186251|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186254|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK297086|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK313193|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AK298306|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##U66036|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186253|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF186256|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AB008164|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##AF026303|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC005353|SULT1C2|6819|sulfotransferase family, cytosolic, 1C, member 2##BC058861|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##NM_006588|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK298755|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##AK297851|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4##BC125043|SULT1C4|27233|sulfotransferase family, cytosolic, 1C, member 4	0.89531	CTCF.p2:1:0.895
chr2	191448050	191448126	reg1044213.p1	3.595	+	TSC_hg19_v1_chr2_-_191399454 NM_001142645	-48622	-	AK296987 TSC_hg19_v1_chr2_-_191399436	-48661	-	AK098085 TSC_hg19_v1_chr2_+_191301120	-147018	+	TSC_hg19_v1_chr2_+_191513840 NM_005966 BC035724 AK292446	65878	+	AK289747 NM_014905 TSC_hg19_v1_chr2_+_191745546	297458	+	TSC_hg19_v1_chr2_+_191745547 BC038507 AB020645 AF158555	297469	+	NM_001142645|TMEM194B|100131211|transmembrane protein 194B##AK296987|TMEM194B|100131211|transmembrane protein 194B##AK098085|MFSD6|54842|major facilitator superfamily domain containing 6##NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK289747|GLS|2744|glutaminase##NM_014905|GLS|2744|glutaminase##BC038507|GLS|2744|glutaminase##AB020645|GLS|2744|glutaminase##AF158555|GLS|2744|glutaminase	0.0	
chr22	31943110	31943199	reg1034007.p2	3.595	+	TSC_hg19_v1_chr22_+_31892521 BC110814 AK292408 BC041101	-50608	+	BC129926 BC129945 TSC_hg19_v1_chr22_+_31892499 AK303362 AK293987	-50713	+	TSC_hg19_v1_chr22_+_31892148 AB011114 NM_001007467 NM_014775	-50982	+	BC033613 TSC_hg19_v1_chr22_+_32010180	67012	+	TSC_hg19_v1_chr22_-_32026821 BC001482 NM_014338	83678	-	TSC_hg19_v1_chr22_-_32058202 AB528208 CU013140 CU013428 CR456540 DQ656048	115054	-	BC110814|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK292408|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC041101|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC129926|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC129945|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK303362|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK293987|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AB011114|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##NM_001007467|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##NM_014775|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC033613|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC001482|PISD|23761|phosphatidylserine decarboxylase##NM_014338|PISD|23761|phosphatidylserine decarboxylase##CU013140|PISD|23761|phosphatidylserine decarboxylase##CU013428|PISD|23761|phosphatidylserine decarboxylase##CR456540|PISD|23761|phosphatidylserine decarboxylase	0.0	
chr3	181630345	181630411	reg1037489.p2	3.595	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-200240	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-200665	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-212986	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	880909	+	AK296750 TSC_hg19_v1_chr3_+_182511291	880917	+	TSC_hg19_v1_chr3_+_182511375 AF156548	881011	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.0	
chr6	159515608	159515738	reg1033587.p1	3.595	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-49572	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-94452	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	-94854	-	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	74757	+	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	598577	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	598689	-	BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial	0.0	
chr6	3356668	3356790	reg1036302.p1	3.595	+	TSC_hg19_v1_chr6_-_3272352 BC090851 BC022217	-84299	-	TSC_hg19_v1_chr6_+_3259232 AK126623 AK095683	-97490	+	TSC_hg19_v1_chr6_+_3259180 NM_001128591 NM_001128592 NM_001135750	-97571	+	BC128580 BC128581 BC038748 NM_021945	88478	-	TSC_hg19_v1_chr6_-_3456513 AL110245	99785	-	BC040876 NM_015482	100034	-	BC090851|SLC22A23|63027|solute carrier family 22, member 23##BC022217|SLC22A23|63027|solute carrier family 22, member 23##AK126623|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##AK095683|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128591|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001128592|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##NM_001135750|PSMG4|389362|proteasome (prosome, macropain) assembly chaperone 4##BC128580|SLC22A23|63027|solute carrier family 22, member 23##BC128581|SLC22A23|63027|solute carrier family 22, member 23##BC038748|SLC22A23|63027|solute carrier family 22, member 23##NM_021945|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23	0.0	
chr8	29387333	29387474	reg1028411.p1	3.595	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-179333	-	AL137704 NM_057158	-181082	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-266789	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	553071	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	553169	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	565540	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chr9	130186145	130186326	reg1041584.p1	3.595	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	-26789	+	NM_032293 AK293732 AK095679	-159428	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-301205	-	TSC_hg19_v1_chr9_-_130186602 AK124330	331	-	NM_007135 TSC_hg19_v1_chr9_+_130186700 AK054606 BC062309 AK302284	446	+	TSC_hg19_v1_chr9_+_130186718 AK316233	486	+	BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##NM_007135|ZNF79|7633|zinc finger protein 79##AK054606|ZNF79|7633|zinc finger protein 79##BC062309|ZNF79|7633|zinc finger protein 79##AK302284|ZNF79|7633|zinc finger protein 79##AK316233|ZNF79|7633|zinc finger protein 79	0.0	
chr11	3872840	3872923	reg1037012.p2	3.594	+	X61587 TSC_hg19_v1_chr11_-_3862185 NM_001665	-10682	-	BC104177 BC104178 TSC_hg19_v1_chr11_-_3862161	-10726	-	NM_014489 AF159615	-43107	+	TSC_hg19_v1_chr11_+_3876919 NM_003156 U52426 HQ317451 BC021300	4048	+	NM_001033 TSC_hg19_v1_chr11_+_4116034 AK222786 AK299629 AK307950 X59543	243108	+	TSC_hg19_v1_chr11_+_4116069 X59617 AK303394	243185	+	X61587|RHOG|391|ras homolog gene family, member G (rho G)##NM_001665|RHOG|391|ras homolog gene family, member G (rho G)##BC104177|RHOG|391|ras homolog gene family, member G (rho G)##BC104178|RHOG|391|ras homolog gene family, member G (rho G)##NM_014489|PGAP2|27315|post-GPI attachment to proteins 2##AF159615|PGAP2|27315|post-GPI attachment to proteins 2##NM_003156|STIM1|6786|stromal interaction molecule 1##U52426|STIM1|6786|stromal interaction molecule 1##HQ317451|STIM1|6786|stromal interaction molecule 1##BC021300|STIM1|6786|stromal interaction molecule 1##NM_001033|RRM1|6240|ribonucleotide reductase M1##AK222786|RRM1|6240|ribonucleotide reductase M1##AK299629|RRM1|6240|ribonucleotide reductase M1##AK307950|RRM1|6240|ribonucleotide reductase M1##X59543|RRM1|6240|ribonucleotide reductase M1##X59617|RRM1|6240|ribonucleotide reductase M1##AK303394|RRM1|6240|ribonucleotide reductase M1	0.0	
chr1	32014818	32014910	reg1008395.p2	3.594	+	AK093784 AK316357 AX748305 NM_001199039 NM_018565 AK296118	-128177	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	-128798	+	NM_001199037 AK298512	-131831	+	NM_001204414 NM_022164 TSC_hg19_v1_chr1_+_32042115 AK292770 AK075398 AK296322 AK298382	27239	+	TSC_hg19_v1_chr1_+_32042122 AY358421	27258	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	27278	+	AK093784|SERINC2|347735|serine incorporator 2##AK316357|SERINC2|347735|serine incorporator 2##NM_001199039|SERINC2|347735|serine incorporator 2##NM_018565|SERINC2|347735|serine incorporator 2##AK296118|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##NM_001204414|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_022164|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK292770|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK075398|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK296322|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298382|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AY358421|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1	0.053434	
chr14	61448141	61448207	reg1035677.p2	3.594	+	TSC_hg19_v1_chr14_+_61447962 BX648332 BC110378 BC064429 BX248072 AF070578 AK303839	-119	+	TSC_hg19_v1_chr14_+_61447932 BC050349	-238	+	NM_001172702 NM_153811 AF543422 TSC_hg19_v1_chr14_+_61447920	-297	+	AB464738 TSC_hg19_v1_chr14_-_61747887	299703	-	BC101726 BC113559 TSC_hg19_v1_chr14_-_61747937	299751	-	TSC_hg19_v1_chr14_-_61747957 AK091169 AX746825	299791	-	BX648332|SLC38A6|145389|solute carrier family 38, member 6##BC110378|SLC38A6|145389|solute carrier family 38, member 6##BC064429|SLC38A6|145389|solute carrier family 38, member 6##BX248072|SLC38A6|145389|solute carrier family 38, member 6##AF070578|SLC38A6|145389|solute carrier family 38, member 6##AK303839|SLC38A6|145389|solute carrier family 38, member 6##BC050349|SLC38A6|145389|solute carrier family 38, member 6##NM_001172702|SLC38A6|145389|solute carrier family 38, member 6##NM_153811|SLC38A6|145389|solute carrier family 38, member 6##AF543422|SLC38A6|145389|solute carrier family 38, member 6##BC101726|TMEM30B|161291|transmembrane protein 30B##BC113559|TMEM30B|161291|transmembrane protein 30B##AK091169|TMEM30B|161291|transmembrane protein 30B	0.0	
chr16	88077845	88077992	reg1035417.p1	3.594	+	AK094158 NM_001173543	-74295	+	AK315535 NM_001173542	-84442	+	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	-92750	+	NM_001127464	415960	+	TSC_hg19_v1_chr16_+_88519687 AF488691	441787	+	TSC_hg19_v1_chr16_+_88519921 NM_153813	442047	+	AK094158|BANP|54971|BTG3 associated nuclear protein##NM_001173543|BANP|54971|BTG3 associated nuclear protein##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein##NM_001127464|ZNF469|84627|zinc finger protein 469##AF488691|ZFPM1|161882|zinc finger protein, multitype 1##NM_153813|ZFPM1|161882|zinc finger protein, multitype 1	0.0	
chr19	1882581	1882676	reg1036228.p1	3.594	+	TSC_hg19_v1_chr19_-_1876169 BC067908	-6462	-	TSC_hg19_v1_chr19_-_1863556 NM_031918	-19072	-	TSC_hg19_v1_chr19_-_1863441 AF327440	-19168	-	BC011667 TSC_hg19_v1_chr19_-_1885409	2764	-	BC020512 TSC_hg19_v1_chr19_-_1885459 BC094816 BC071876 BC071644	2817	-	TSC_hg19_v1_chr19_-_1885477 BC009256 BC033749	2843	-	NM_031918|KLF16|83855|Kruppel-like factor 16##AF327440|KLF16|83855|Kruppel-like factor 16##BC011667|FAM108A1|81926|family with sequence similarity 108, member A1##BC020512|FAM108A1|81926|family with sequence similarity 108, member A1##BC094816|FAM108A1|81926|family with sequence similarity 108, member A1##BC071876|FAM108A1|81926|family with sequence similarity 108, member A1##BC071644|FAM108A1|81926|family with sequence similarity 108, member A1##BC009256|FAM108A1|81926|family with sequence similarity 108, member A1##BC033749|FAM108A1|81926|family with sequence similarity 108, member A1	0.027942	
chr2	136893852	136894033	reg1038155.p2	3.594	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-18266	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-20144	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-150726	-	TSC_hg19_v1_chr2_+_137523114 AK299929	629174	+	NM_001080427	854519	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1827992	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.0	
chr3	53197253	53197433	reg1031667.p2	3.594	+	BC043350 TSC_hg19_v1_chr3_+_53195224 NM_006254 NM_212539	-2124	+	TSC_hg19_v1_chr3_-_53164452 AJ318099 BC043595 NM_052859	-32892	-	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	-117280	-	U55017 CU679545 DQ893078 EU176764 TSC_hg19_v1_chr3_-_53290039 AK309482 AK289454 X67688 BX647248 BC009970 BC002433 AK093667 AK223614 AK293438 AK301231 AK303191 AX748252 L12711	92668	-	TSC_hg19_v1_chr3_-_53290099 NM_001064 NM_001135055	92771	-	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	184250	-	BC043350|PRKCD|5580|protein kinase C, delta##NM_006254|PRKCD|5580|protein kinase C, delta##NM_212539|PRKCD|5580|protein kinase C, delta##AJ318099|RFT1|91869|RFT1 homolog (S. cerevisiae)##BC043595|RFT1|91869|RFT1 homolog (S. cerevisiae)##NM_052859|RFT1|91869|RFT1 homolog (S. cerevisiae)##AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1##U55017|TKT|7086|transketolase##DQ893078|TKT|7086|transketolase##EU176764|TKT|7086|transketolase##AK309482|TKT|7086|transketolase##AK289454|TKT|7086|transketolase##X67688|TKT|7086|transketolase##BX647248|TKT|7086|transketolase##BC009970|TKT|7086|transketolase##BC002433|TKT|7086|transketolase##AK093667|TKT|7086|transketolase##AK223614|TKT|7086|transketolase##AK293438|TKT|7086|transketolase##AK301231|TKT|7086|transketolase##AK303191|TKT|7086|transketolase##L12711|TKT|7086|transketolase##NM_001064|TKT|7086|transketolase##NM_001135055|TKT|7086|transketolase##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)	0.0	
chr6	17884831	17884960	reg1033677.p1	3.594	+	Z25535 AB384675 AK295644 BC052965 NM_005124 TSC_hg19_v1_chr6_-_17707139 AB210024	-177993	-	TSC_hg19_v1_chr6_+_17600620 NM_016255 AK296393 AK312814 AF097027 BC047881	-284296	+	AK312362 NM_006366 TSC_hg19_v1_chr6_+_17393918 AL832154 AK295600 AK294215 AK293134 AK297538 AK308461 BC008481	-491113	+	AJ291578 AJ291579 BC127115 BC127116 AY014403 AY014404 TSC_hg19_v1_chr6_-_17987786	102865	-	TSC_hg19_v1_chr6_-_17987867 BC062673 NM_001105566 NM_001105567 NM_001105568 NM_001243423 NM_022113	102971	-	AY324850 BC103888 BC103889 BC103890 NM_198586	237955	-	Z25535|NUP153|9972|nucleoporin 153kDa##AK295644|NUP153|9972|nucleoporin 153kDa##BC052965|NUP153|9972|nucleoporin 153kDa##NM_005124|NUP153|9972|nucleoporin 153kDa##AB210024|NUP153|9972|nucleoporin 153kDa##NM_016255|FAM8A1|51439|family with sequence similarity 8, member A1##AK296393|FAM8A1|51439|family with sequence similarity 8, member A1##AK312814|FAM8A1|51439|family with sequence similarity 8, member A1##AF097027|FAM8A1|51439|family with sequence similarity 8, member A1##BC047881|FAM8A1|51439|family with sequence similarity 8, member A1##AK312362|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##NM_006366|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AL832154|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK295600|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK294215|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK293134|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK297538|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AK308461|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##BC008481|CAP2|10486|CAP, adenylate cyclase-associated protein, 2 (yeast)##AJ291578|KIF13A|63971|kinesin family member 13A##AJ291579|KIF13A|63971|kinesin family member 13A##BC127115|KIF13A|63971|kinesin family member 13A##BC127116|KIF13A|63971|kinesin family member 13A##AY014403|KIF13A|63971|kinesin family member 13A##AY014404|KIF13A|63971|kinesin family member 13A##BC062673|KIF13A|63971|kinesin family member 13A##NM_001105566|KIF13A|63971|kinesin family member 13A##NM_001105567|KIF13A|63971|kinesin family member 13A##NM_001105568|KIF13A|63971|kinesin family member 13A##NM_001243423|KIF13A|63971|kinesin family member 13A##NM_022113|KIF13A|63971|kinesin family member 13A##AY324850|NHLRC1|378884|NHL repeat containing 1##BC103888|NHLRC1|378884|NHL repeat containing 1##BC103889|NHLRC1|378884|NHL repeat containing 1##BC103890|NHLRC1|378884|NHL repeat containing 1##NM_198586|NHLRC1|378884|NHL repeat containing 1	0.0	
chr6	39197406	39197509	reg1036505.p2	3.594	+	AF084830 BC060793 NM_003740 TSC_hg19_v1_chr6_-_39197252	-217	-	TSC_hg19_v1_chr6_-_39082938 CR627244 AK001963 NM_018322 EU832483 EU832563 BC022007	-114611	-	AF086405 TSC_hg19_v1_chr6_-_39072506	-124998	-	AF358910 CU693040 DQ891712 DQ894889 EU978944 BC025726 AY358853 AF339912 AK310582 AK315273 NM_031460 NM_001135111	84708	-	AF358909 AY253145 AY253146 AY253147 BC111860 NM_001135105 NM_001135106 NM_001135107 NM_032115 EU978943	92882	-	BC117307 BC143444 BC143445 AK131471 NM_145027	495688	-	AF084830|KCNK5|8645|potassium channel, subfamily K, member 5##BC060793|KCNK5|8645|potassium channel, subfamily K, member 5##NM_003740|KCNK5|8645|potassium channel, subfamily K, member 5##CR627244|C6orf64|55776|chromosome 6 open reading frame 64##AK001963|C6orf64|55776|chromosome 6 open reading frame 64##NM_018322|C6orf64|55776|chromosome 6 open reading frame 64##EU832483|C6orf64|55776|chromosome 6 open reading frame 64##EU832563|C6orf64|55776|chromosome 6 open reading frame 64##BC022007|C6orf64|55776|chromosome 6 open reading frame 64##AF086405|C6orf64|55776|chromosome 6 open reading frame 64##AF358910|KCNK17|89822|potassium channel, subfamily K, member 17##DQ891712|KCNK17|89822|potassium channel, subfamily K, member 17##DQ894889|KCNK17|89822|potassium channel, subfamily K, member 17##EU978944|KCNK17|89822|potassium channel, subfamily K, member 17##BC025726|KCNK17|89822|potassium channel, subfamily K, member 17##AY358853|KCNK17|89822|potassium channel, subfamily K, member 17##AF339912|KCNK17|89822|potassium channel, subfamily K, member 17##AK310582|KCNK17|89822|potassium channel, subfamily K, member 17##AK315273|KCNK17|89822|potassium channel, subfamily K, member 17##NM_031460|KCNK17|89822|potassium channel, subfamily K, member 17##NM_001135111|KCNK17|89822|potassium channel, subfamily K, member 17##AF358909|KCNK16|83795|potassium channel, subfamily K, member 16##AY253145|KCNK16|83795|potassium channel, subfamily K, member 16##AY253146|KCNK16|83795|potassium channel, subfamily K, member 16##AY253147|KCNK16|83795|potassium channel, subfamily K, member 16##BC111860|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135105|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135106|KCNK16|83795|potassium channel, subfamily K, member 16##NM_001135107|KCNK16|83795|potassium channel, subfamily K, member 16##NM_032115|KCNK16|83795|potassium channel, subfamily K, member 16##EU978943|KCNK16|83795|potassium channel, subfamily K, member 16##BC117307|KIF6|221458|kinesin family member 6##BC143444|KIF6|221458|kinesin family member 6##BC143445|KIF6|221458|kinesin family member 6##AK131471|KIF6|221458|kinesin family member 6##NM_145027|KIF6|221458|kinesin family member 6	0.0	
chr8	38823928	38824033	reg1003564.p1	3.594	+	AK098787 NM_021623 TSC_hg19_v1_chr8_+_38758793 AK296068 AK291842 AF286164	-65169	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	-179212	+	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	-179258	+	NM_153692 AK075205 BC057765 AK300197	7729	+	AL834224 BC004878 BC109050 BC109049 AF353991 AK075027 TSC_hg19_v1_chr8_-_38854016 AK225093	30032	-	TSC_hg19_v1_chr8_-_38854029 AK314703 AK075155 NM_001024380 NM_001024381 NM_031940 NM_078473	30052	-	AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_153692|HTRA4|203100|HtrA serine peptidase 4##AK075205|HTRA4|203100|HtrA serine peptidase 4##BC057765|HTRA4|203100|HtrA serine peptidase 4##AK300197|HTRA4|203100|HtrA serine peptidase 4##AL834224|TM2D2|83877|TM2 domain containing 2##BC004878|TM2D2|83877|TM2 domain containing 2##BC109050|TM2D2|83877|TM2 domain containing 2##BC109049|TM2D2|83877|TM2 domain containing 2##AF353991|TM2D2|83877|TM2 domain containing 2##AK075027|TM2D2|83877|TM2 domain containing 2##AK225093|TM2D2|83877|TM2 domain containing 2##AK314703|TM2D2|83877|TM2 domain containing 2##AK075155|TM2D2|83877|TM2 domain containing 2##NM_001024380|TM2D2|83877|TM2 domain containing 2##NM_001024381|TM2D2|83877|TM2 domain containing 2##NM_031940|TM2D2|83877|TM2 domain containing 2##NM_078473|TM2D2|83877|TM2 domain containing 2	0.0	
chr1	157333875	157333991	reg1025834.p2	3.593	+	TSC_hg19_v1_chr1_-_157108169 BC022868 NM_005240 AK304789 AK316274 NM_001145312	-225650	-	TSC_hg19_v1_chr1_-_157108158 L16464	-225783	-	AK131392 NM_001004341	-264334	-	AF397453 BC101066 BC101067 BC101068 BC101069 AF343662 AF343663 AF343664 AF343665 AK301356 AL834187 AY358085 AK311561 AK300010 AF369794 NM_001195388 NM_031281	188297	-	AF329490 AF397452 BC143628 BC125173 BC125174 AF343659 AF343660 AF343661 NM_031282	233868	-	DQ892459 DQ895672 AY043466 AF416901 AF416902 AF416903 AF416904 AF416905 BC028933 BC013698 AK301257 AF459027 NM_052939 AK098122	336594	-	BC022868|ETV3|2117|ets variant 3##NM_005240|ETV3|2117|ets variant 3##AK304789|ETV3|2117|ets variant 3##AK316274|ETV3|2117|ets variant 3##NM_001145312|ETV3|2117|ets variant 3##L16464|ETV3|2117|ets variant 3##AK131392|ETV3L|440695|ets variant 3-like##NM_001004341|ETV3L|440695|ets variant 3-like##AF397453|FCRL5|83416|Fc receptor-like 5##BC101066|FCRL5|83416|Fc receptor-like 5##BC101067|FCRL5|83416|Fc receptor-like 5##BC101068|FCRL5|83416|Fc receptor-like 5##BC101069|FCRL5|83416|Fc receptor-like 5##AF343662|FCRL5|83416|Fc receptor-like 5##AF343663|FCRL5|83416|Fc receptor-like 5##AF343664|FCRL5|83416|Fc receptor-like 5##AF343665|FCRL5|83416|Fc receptor-like 5##AK301356|FCRL5|83416|Fc receptor-like 5##AL834187|FCRL5|83416|Fc receptor-like 5##AY358085|FCRL5|83416|Fc receptor-like 5##AK300010|FCRL5|83416|Fc receptor-like 5##AF369794|FCRL5|83416|Fc receptor-like 5##NM_001195388|FCRL5|83416|Fc receptor-like 5##NM_031281|FCRL5|83416|Fc receptor-like 5##AF329490|FCRL4|83417|Fc receptor-like 4##AF397452|FCRL4|83417|Fc receptor-like 4##BC143628|FCRL4|83417|Fc receptor-like 4##BC125173|FCRL4|83417|Fc receptor-like 4##BC125174|FCRL4|83417|Fc receptor-like 4##AF343659|FCRL4|83417|Fc receptor-like 4##AF343660|FCRL4|83417|Fc receptor-like 4##AF343661|FCRL4|83417|Fc receptor-like 4##NM_031282|FCRL4|83417|Fc receptor-like 4##DQ892459|FCRL3|115352|Fc receptor-like 3##DQ895672|FCRL3|115352|Fc receptor-like 3##AY043466|FCRL3|115352|Fc receptor-like 3##AF416901|FCRL3|115352|Fc receptor-like 3##AF416902|FCRL3|115352|Fc receptor-like 3##AF416903|FCRL3|115352|Fc receptor-like 3##AF416904|FCRL3|115352|Fc receptor-like 3##AF416905|FCRL3|115352|Fc receptor-like 3##BC028933|FCRL3|115352|Fc receptor-like 3##BC013698|FCRL3|115352|Fc receptor-like 3##AK301257|FCRL3|115352|Fc receptor-like 3##AF459027|FCRL3|115352|Fc receptor-like 3##NM_052939|FCRL3|115352|Fc receptor-like 3##AK098122|FCRL3|115352|Fc receptor-like 3	0.0	
chr1	206780387	206780482	reg1033949.p1	3.593	+	TSC_hg19_v1_chr1_+_206730897 CU692112 EU831661	-49537	+	AL832784 AY261332 AK292039 TSC_hg19_v1_chr1_+_206730613	-49826	+	TSC_hg19_v1_chr1_+_206730542 BC042651 AY216268	-49914	+	DQ891590 DQ894784 TSC_hg19_v1_chr1_-_206785812 BC039134 BC058905 AK225259 BC001585 AF220417 AF262403 AK294536 AK001852	5321	-	TSC_hg19_v1_chr1_-_206785905 NM_001201478 NM_006893	5449	-	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	28410	+	EU831661|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AL832784|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY261332|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AK292039|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC042651|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY216268|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##DQ891590|EIF2D|1939|eukaryotic translation initiation factor 2D##DQ894784|EIF2D|1939|eukaryotic translation initiation factor 2D##BC039134|EIF2D|1939|eukaryotic translation initiation factor 2D##BC058905|EIF2D|1939|eukaryotic translation initiation factor 2D##AK225259|EIF2D|1939|eukaryotic translation initiation factor 2D##BC001585|EIF2D|1939|eukaryotic translation initiation factor 2D##AF220417|EIF2D|1939|eukaryotic translation initiation factor 2D##AF262403|EIF2D|1939|eukaryotic translation initiation factor 2D##AK294536|EIF2D|1939|eukaryotic translation initiation factor 2D##AK001852|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_001201478|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_006893|EIF2D|1939|eukaryotic translation initiation factor 2D##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3	0.0	
chr15	33534986	33535080	reg1029602.p1	3.593	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-174798	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-523867	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-524776	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	68136	+	TSC_hg19_v1_chr15_-_34212524 BC037796	677525	-	AK095198 NM_012125	726055	+	NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5	0.929391	CTCF.p2:14:0.929
chr15	66219619	66219686	reg1036847.p2	3.593	+	TSC_hg19_v1_chr15_+_66161828 AK297549 AK298961 NM_001206836 NM_004663 AK311770 BC013348 AF000231 X56740 AK300008 AF498946 BT020151 BT020154 CR407669 CR536493 DQ893054 DQ896303 X53143	-57805	+	AK299570 TSC_hg19_v1_chr15_-_66084632 AF534403 AK091368 AX746940 AK307411 NM_001144823 NM_005848	-135059	-	AK290292 TSC_hg19_v1_chr15_-_66084442 AL833317 BC041706 BC028057	-135179	-	TSC_hg19_v1_chr15_-_66321664 AK054827	102041	-	BC117419 BC126313 AB058677 NM_032445 BC029999 TSC_hg19_v1_chr15_-_66546155	326425	-	NM_133375 AK295392 BC022089	365993	+	AK297549|RAB11A|8766|RAB11A, member RAS oncogene family##AK298961|RAB11A|8766|RAB11A, member RAS oncogene family##NM_001206836|RAB11A|8766|RAB11A, member RAS oncogene family##NM_004663|RAB11A|8766|RAB11A, member RAS oncogene family##AK311770|RAB11A|8766|RAB11A, member RAS oncogene family##BC013348|RAB11A|8766|RAB11A, member RAS oncogene family##AF000231|RAB11A|8766|RAB11A, member RAS oncogene family##X56740|RAB11A|8766|RAB11A, member RAS oncogene family##AK300008|RAB11A|8766|RAB11A, member RAS oncogene family##AF498946|RAB11A|8766|RAB11A, member RAS oncogene family##BT020151|RAB11A|8766|RAB11A, member RAS oncogene family##BT020154|RAB11A|8766|RAB11A, member RAS oncogene family##CR407669|RAB11A|8766|RAB11A, member RAS oncogene family##CR536493|RAB11A|8766|RAB11A, member RAS oncogene family##DQ893054|RAB11A|8766|RAB11A, member RAS oncogene family##DQ896303|RAB11A|8766|RAB11A, member RAS oncogene family##X53143|RAB11A|8766|RAB11A, member RAS oncogene family##AK299570|DENND4A|10260|DENN/MADD domain containing 4A##AF534403|DENND4A|10260|DENN/MADD domain containing 4A##AK091368|DENND4A|10260|DENN/MADD domain containing 4A##AK307411|DENND4A|10260|DENN/MADD domain containing 4A##NM_001144823|DENND4A|10260|DENN/MADD domain containing 4A##NM_005848|DENND4A|10260|DENN/MADD domain containing 4A##AK290292|DENND4A|10260|DENN/MADD domain containing 4A##AL833317|DENND4A|10260|DENN/MADD domain containing 4A##BC041706|DENND4A|10260|DENN/MADD domain containing 4A##BC028057|DENND4A|10260|DENN/MADD domain containing 4A##BC117419|MEGF11|84465|multiple EGF-like-domains 11##BC126313|MEGF11|84465|multiple EGF-like-domains 11##AB058677|MEGF11|84465|multiple EGF-like-domains 11##NM_032445|MEGF11|84465|multiple EGF-like-domains 11##BC029999|MEGF11|84465|multiple EGF-like-domains 11##NM_133375|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##AK295392|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like##BC022089|DIS3L|115752|DIS3 mitotic control homolog (S. cerevisiae)-like	0.0	
chr16	55577519	55577615	reg1029271.p1	3.593	+	TSC_hg19_v1_chr16_+_55543044 EU831434 EU831526 AB244718 CU677978	-34499	+	TSC_hg19_v1_chr16_+_55542983 AK308386 AK000488	-34559	+	TSC_hg19_v1_chr16_+_55542966 NM_017839 BC002472	-34623	+	BC006000 NM_032330 BC005397 AY052551 CU675157 EU832656	23058	+	NM_001172501	111974	+	TSC_hg19_v1_chr16_+_55689899 AK312793 M65105	112418	+	EU831434|LPCAT2|54947|lysophosphatidylcholine acyltransferase 2##EU831526|LPCAT2|54947|lysophosphatidylcholine acyltransferase 2##AB244718|LPCAT2|54947|lysophosphatidylcholine acyltransferase 2##AK308386|LPCAT2|54947|lysophosphatidylcholine acyltransferase 2##AK000488|LPCAT2|54947|lysophosphatidylcholine acyltransferase 2##NM_017839|LPCAT2|54947|lysophosphatidylcholine acyltransferase 2##BC002472|LPCAT2|54947|lysophosphatidylcholine acyltransferase 2##BC006000|CAPNS2|84290|calpain, small subunit 2##NM_032330|CAPNS2|84290|calpain, small subunit 2##BC005397|CAPNS2|84290|calpain, small subunit 2##AY052551|CAPNS2|84290|calpain, small subunit 2##EU832656|CAPNS2|84290|calpain, small subunit 2##NM_001172501|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##AK312793|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2##M65105|SLC6A2|6530|solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	0.184516	
chr16	67850087	67850228	reg1000088.p1	3.593	+	AF132730 AK303841 BC050693 AK302300 AK301920 NM_018430 BC111018 BC035320 AK027245	-9138	+	TSC_hg19_v1_chr16_-_67840464 BC121176 BC121177 AY337313 NM_020850	-9648	-	TSC_hg19_v1_chr16_-_67840456 AB384605 AB040897 AK055727 AK298806 AK304030 BC099917 AK295171 AK295530	-9753	-	TSC_hg19_v1_chr16_-_67867789 BC007642 BC015202 AK301621 AK125366 AK297570	17608	-	AK225399 TSC_hg19_v1_chr16_-_67867798	17641	-	AK023173 AK300887 TSC_hg19_v1_chr16_-_67867801	17646	-	AF132730|TSNAXIP1|55815|translin-associated factor X interacting protein 1##AK303841|TSNAXIP1|55815|translin-associated factor X interacting protein 1##BC050693|TSNAXIP1|55815|translin-associated factor X interacting protein 1##AK302300|TSNAXIP1|55815|translin-associated factor X interacting protein 1##AK301920|TSNAXIP1|55815|translin-associated factor X interacting protein 1##NM_018430|TSNAXIP1|55815|translin-associated factor X interacting protein 1##BC111018|TSNAXIP1|55815|translin-associated factor X interacting protein 1##BC035320|TSNAXIP1|55815|translin-associated factor X interacting protein 1##AK027245|TSNAXIP1|55815|translin-associated factor X interacting protein 1##BC121176|RANBP10|57610|RAN binding protein 10##BC121177|RANBP10|57610|RAN binding protein 10##AY337313|RANBP10|57610|RAN binding protein 10##NM_020850|RANBP10|57610|RAN binding protein 10##AB040897|RANBP10|57610|RAN binding protein 10##AK055727|RANBP10|57610|RAN binding protein 10##AK298806|RANBP10|57610|RAN binding protein 10##AK304030|RANBP10|57610|RAN binding protein 10##BC099917|RANBP10|57610|RAN binding protein 10##AK295171|RANBP10|57610|RAN binding protein 10##AK295530|RANBP10|57610|RAN binding protein 10##BC007642|CENPT|80152|centromere protein T##BC015202|CENPT|80152|centromere protein T##AK301621|CENPT|80152|centromere protein T##AK125366|CENPT|80152|centromere protein T##AK297570|CENPT|80152|centromere protein T##AK225399|CENPT|80152|centromere protein T##AK023173|CENPT|80152|centromere protein T##AK300887|CENPT|80152|centromere protein T	0.0	
chr17	75461853	75461959	reg1036152.p1	3.593	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-14517	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-15124	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	-15261	+	AK056495 NM_001113495	9418	+	TSC_hg19_v1_chr17_+_75543021 AK096234	81114	+	BC039479 NM_001142640 NM_018996	538376	+	AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C	0.0	
chr19	36100642	36100813	reg1026602.p1	3.593	+	AK058032 AK223259 NM_000704	-46168	-	TSC_hg19_v1_chr19_-_36036923 CR627053	-63819	-	TSC_hg19_v1_chr19_+_36036553 NM_001242597 NM_001242598 NM_032635 Y18007 BC001118 CU674562	-64183	+	TSC_hg19_v1_chr19_+_36103655 BC064390 NM_015302 BC171905 BC157882 AK307703 AB020648 BC013947	2944	+	TSC_hg19_v1_chr19_+_36119937 BC031682	19215	+	TSC_hg19_v1_chr19_+_36119959 BC002868 BC004204 NM_024321 AK301669 AB384666 CU678262	19279	+	AK058032|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##AK223259|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##NM_000704|ATP4A|495|ATPase, H+/K+ exchanging, alpha polypeptide##CR627053|LOC100506469|100506469|uncharacterized LOC100506469##NM_001242597|TMEM147|10430|transmembrane protein 147##NM_001242598|TMEM147|10430|transmembrane protein 147##NM_032635|TMEM147|10430|transmembrane protein 147##Y18007|TMEM147|10430|transmembrane protein 147##BC001118|TMEM147|10430|transmembrane protein 147##BC064390|HAUS5|23354|HAUS augmin-like complex, subunit 5##NM_015302|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC171905|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC157882|HAUS5|23354|HAUS augmin-like complex, subunit 5##AK307703|HAUS5|23354|HAUS augmin-like complex, subunit 5##AB020648|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC013947|HAUS5|23354|HAUS augmin-like complex, subunit 5##BC031682|RBM42|79171|RNA binding motif protein 42##BC002868|RBM42|79171|RNA binding motif protein 42##BC004204|RBM42|79171|RNA binding motif protein 42##NM_024321|RBM42|79171|RNA binding motif protein 42##AK301669|RBM42|79171|RNA binding motif protein 42	0.0	
chr3	99270586	99270690	reg1038942.p1	3.593	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-650146	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-819051	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-819393	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	86812	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	266107	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	324353	-	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like	0.505791	CTCF.p2:-38:0.506
chr5	149381410	149381539	reg1038121.p1	3.593	+	AK096325 NM_030953 TSC_hg19_v1_chr5_-_149380752	-733	-	TSC_hg19_v1_chr5_+_149380311 D83778	-1163	+	TSC_hg19_v1_chr5_+_149380306 BC051025	-1169	+	EU826593 AB527286 TSC_hg19_v1_chr5_-_149466061	84553	-	TSC_hg19_v1_chr5_-_149466096 BC129939 BX648599	84627	-	TSC_hg19_v1_chr5_-_149466123 AK294467	84642	-	AK096325|TIGD6|81789|tigger transposable element derived 6##NM_030953|TIGD6|81789|tigger transposable element derived 6##D83778|HMGXB3|22993|HMG box domain containing 3##BC051025|HMGXB3|22993|HMG box domain containing 3##EU826593|CSF1R|1436|colony stimulating factor 1 receptor##BC129939|CSF1R|1436|colony stimulating factor 1 receptor##BX648599|CSF1R|1436|colony stimulating factor 1 receptor##AK294467|CSF1R|1436|colony stimulating factor 1 receptor	0.0	
chr6	35655683	35655863	reg1024832.p2	3.593	+	CU689498 EU446712 BC065261 NM_003322 BC032714 BC001761 BC021268 AB593124 AB593123 DQ426893	-175099	-	BC010053 BC027877 BC091488 AF142482 TSC_hg19_v1_chr6_-_35464854 NM_003214	-190961	-	AB082926 BC006791 U12404 TSC_hg19_v1_chr6_+_35436204 BC011366	-219570	+	TSC_hg19_v1_chr6_-_35656616 HM245391 AB209893	847	-	TSC_hg19_v1_chr6_-_35656693 BC111050 AK222807 AK302704 AK303356 AK312422 BX647390 NM_001145776 AF194172 U71321 NM_001145777 NM_004117	933	-	BC042605 NM_001145775	40586	-	EU446712|TULP1|7287|tubby like protein 1##BC065261|TULP1|7287|tubby like protein 1##NM_003322|TULP1|7287|tubby like protein 1##BC032714|TULP1|7287|tubby like protein 1##AB593124|TULP1|7287|tubby like protein 1##AB593123|TULP1|7287|tubby like protein 1##DQ426893|TULP1|7287|tubby like protein 1##BC010053|TEAD3|7005|TEA domain family member 3##BC027877|TEAD3|7005|TEA domain family member 3##BC091488|TEAD3|7005|TEA domain family member 3##AF142482|TEAD3|7005|TEA domain family member 3##NM_003214|TEAD3|7005|TEA domain family member 3##AB082926|RPL10A|4736|ribosomal protein L10a##BC006791|RPL10A|4736|ribosomal protein L10a##U12404|RPL10A|4736|ribosomal protein L10a##BC011366|RPL10A|4736|ribosomal protein L10a##HM245391|FKBP5|2289|FK506 binding protein 5##AB209893|FKBP5|2289|FK506 binding protein 5##BC111050|FKBP5|2289|FK506 binding protein 5##AK222807|FKBP5|2289|FK506 binding protein 5##AK302704|FKBP5|2289|FK506 binding protein 5##AK303356|FKBP5|2289|FK506 binding protein 5##AK312422|FKBP5|2289|FK506 binding protein 5##BX647390|FKBP5|2289|FK506 binding protein 5##NM_001145776|FKBP5|2289|FK506 binding protein 5##AF194172|FKBP5|2289|FK506 binding protein 5##U71321|FKBP5|2289|FK506 binding protein 5##NM_001145777|FKBP5|2289|FK506 binding protein 5##NM_004117|FKBP5|2289|FK506 binding protein 5##BC042605|FKBP5|2289|FK506 binding protein 5##NM_001145775|FKBP5|2289|FK506 binding protein 5	0.0	
chr8	124253518	124253647	reg1032452.p1	3.593	+	CU690903 TSC_hg19_v1_chr8_-_124220025	-33607	-	TSC_hg19_v1_chr8_+_124194906 BC007828 CU690902	-58599	+	NM_032899 NM_207006 BC052300 TSC_hg19_v1_chr8_+_124194829	-58792	+	TSC_hg19_v1_chr8_-_124253618 AK222660 GQ129275 GQ129276 BC067796 AK027731 NM_032847	28	-	AF195766 TSC_hg19_v1_chr8_-_124286514 AK094451 BC040481	32941	-	TSC_hg19_v1_chr8_-_124286697 NM_001017926 NM_001204180 NM_007222	33109	-	BC007828|FAM83A|84985|family with sequence similarity 83, member A##NM_032899|FAM83A|84985|family with sequence similarity 83, member A##NM_207006|FAM83A|84985|family with sequence similarity 83, member A##BC052300|FAM83A|84985|family with sequence similarity 83, member A##AK222660|C8orf76|84933|chromosome 8 open reading frame 76##GQ129275|C8orf76|84933|chromosome 8 open reading frame 76##GQ129276|C8orf76|84933|chromosome 8 open reading frame 76##BC067796|C8orf76|84933|chromosome 8 open reading frame 76##AK027731|C8orf76|84933|chromosome 8 open reading frame 76##NM_032847|C8orf76|84933|chromosome 8 open reading frame 76##AF195766|ZHX1|11244|zinc fingers and homeoboxes 1##AK094451|ZHX1|11244|zinc fingers and homeoboxes 1##BC040481|ZHX1|11244|zinc fingers and homeoboxes 1##NM_001017926|ZHX1|11244|zinc fingers and homeoboxes 1##NM_001204180|ZHX1-C8ORF76|100533106|ZHX1-C8ORF76 readthrough##NM_007222|ZHX1|11244|zinc fingers and homeoboxes 1	0.0	
chrX	74001521	74001665	reg1023294.p1	3.593	+	NM_016120 NM_183353 TSC_hg19_v1_chrX_-_73834460	-167129	-	TSC_hg19_v1_chrX_-_73834444 AK001334	-167154	-	BC002451 TSC_hg19_v1_chrX_-_73834428	-167165	-	AK307471 NM_001008537 AB095942 BC152557	143706	-	TSC_hg19_v1_chrX_-_74376076 AF078777 AK307414 AF133659 BT009918 CU675349 DQ890692 EU176476 BC006323 AF038950 BX537833 AK294657 AK001418 NM_004299	374510	-	NM_145052 TSC_hg19_v1_chrX_+_74493908 AY643714 AK309951 AK056354 BC015116 CR749336 AK293024	492365	+	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting##NM_183353|RLIM|51132|ring finger protein, LIM domain interacting##AK001334|RLIM|51132|ring finger protein, LIM domain interacting##AK307471|KIAA2022|340533|KIAA2022##NM_001008537|KIAA2022|340533|KIAA2022##AB095942|KIAA2022|340533|KIAA2022##BC152557|KIAA2022|340533|KIAA2022##AF078777|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK307414|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AF133659|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BT009918|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##DQ890692|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##EU176476|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BC006323|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AF038950|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BX537833|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK294657|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK001418|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##NM_004299|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##NM_145052|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AY643714|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK309951|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK056354|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##BC015116|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##CR749336|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK293024|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)	0.0	
chr13	28843167	28843310	reg1031672.p2	3.592	+	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	-130572	+	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	-168551	-	NM_001105577	-280465	-	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	226006	-	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	389970	+	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	390056	+	AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##NM_001105577|PRHOXNB|646625|parahox cluster neighbor##BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein	0.187223	
chr17	6918762	6918942	reg1033787.p3	3.592	+	TSC_hg19_v1_chr17_+_6918100 AK295795 BC040036	-745	+	NM_001142798 NM_001142799 NM_174893 TSC_hg19_v1_chr17_+_6918071 AK055800	-784	+	TSC_hg19_v1_chr17_+_6915973 BC040148	-2877	+	TSC_hg19_v1_chr17_+_6926368 BC059404 NM_181844 AK293102 AK292878 AB076580	7525	+	TSC_hg19_v1_chr17_+_6926416 AK122893	7565	+	TSC_hg19_v1_chr17_+_6939347 BC142618 NM_201566	20533	+	AK295795|C17orf49|124944|chromosome 17 open reading frame 49##BC040036|C17orf49|124944|chromosome 17 open reading frame 49##NM_001142798|C17orf49|124944|chromosome 17 open reading frame 49##NM_001142799|C17orf49|124944|chromosome 17 open reading frame 49##NM_174893|C17orf49|124944|chromosome 17 open reading frame 49##AK055800|C17orf49|124944|chromosome 17 open reading frame 49##BC040148|RNASEK-C17ORF49|100529209|RNASEK-C17orf49 readthrough##BC059404|BCL6B|255877|B-cell CLL/lymphoma 6, member B##NM_181844|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AK293102|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AK292878|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AB076580|BCL6B|255877|B-cell CLL/lymphoma 6, member B##AK122893|BCL6B|255877|B-cell CLL/lymphoma 6, member B##BC142618|SLC16A13|201232|solute carrier family 16, member 13 (monocarboxylic acid transporter 13)##NM_201566|SLC16A13|201232|solute carrier family 16, member 13 (monocarboxylic acid transporter 13)	0.0	
chr19	11592868	11592972	reg1006493.p1	3.592	+	AY036909 L26405 D26158 BC014144 NM_001420 NM_032281 TSC_hg19_v1_chr19_-_11591862	-1267	-	TSC_hg19_v1_chr19_-_11565617 BC068222	-27292	-	BC080533 BC011875 TSC_hg19_v1_chr19_-_11564576	-28348	-	TSC_hg19_v1_chr19_-_11616637 HQ258023 AY072704 BC014187 AK314986 BC016816	23607	-	TSC_hg19_v1_chr19_-_11616689 AK131037 NM_138783	23801	-	AK314905 NM_001243204	46759	-	AY036909|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##L26405|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##D26158|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC014144|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_001420|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_032281|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC080533|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC011875|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##HQ258023|ZNF653|115950|zinc finger protein 653##AY072704|ZNF653|115950|zinc finger protein 653##BC014187|ZNF653|115950|zinc finger protein 653##AK314986|ZNF653|115950|zinc finger protein 653##BC016816|ZNF653|115950|zinc finger protein 653##AK131037|ZNF653|115950|zinc finger protein 653##NM_138783|ZNF653|115950|zinc finger protein 653##AK314905|ECSIT|51295|ECSIT homolog (Drosophila)##NM_001243204|ECSIT|51295|ECSIT homolog (Drosophila)	0.014024	
chr2	233846822	233846903	reg1041578.p2	3.592	+	TSC_hg19_v1_chr2_-_233792866 AK297390 NM_001114090 BC073962	-54003	-	TSC_hg19_v1_chr2_+_233740495 BC049848 BC035093	-106350	+	AY358535 NM_206895 BC130307 BC130309	-111868	+	TSC_hg19_v1_chr2_-_233877913 AK298315	31045	-	TSC_hg19_v1_chr2_-_233877933 BC031573 NM_019850 AK025225 AK300953	31088	-	BC069151 BC107053 NM_005383	50519	+	AK297390|NGEF|25791|neuronal guanine nucleotide exchange factor##NM_001114090|NGEF|25791|neuronal guanine nucleotide exchange factor##BC073962|NGEF|25791|neuronal guanine nucleotide exchange factor##BC049848|C2orf82|389084|chromosome 2 open reading frame 82##BC035093|C2orf82|389084|chromosome 2 open reading frame 82##AY358535|C2orf82|389084|chromosome 2 open reading frame 82##NM_206895|C2orf82|389084|chromosome 2 open reading frame 82##BC130307|C2orf82|389084|chromosome 2 open reading frame 82##BC130309|C2orf82|389084|chromosome 2 open reading frame 82##AK298315|NGEF|25791|neuronal guanine nucleotide exchange factor##BC031573|NGEF|25791|neuronal guanine nucleotide exchange factor##NM_019850|NGEF|25791|neuronal guanine nucleotide exchange factor##AK300953|NGEF|25791|neuronal guanine nucleotide exchange factor##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)	0.74911	CTCF.p2:32:0.725
chr22	45464415	45464481	reg1041446.p2	3.592	+	TSC_hg19_v1_chr22_-_45405781 AK092243 AX747427 NM_001135862	-58654	-	AB489146 CU012999 CU013287 CU680262 CR456448 BC012187 NM_138415	-58944	-	TSC_hg19_v1_chr22_-_45404785 AK299836 AK297317 AK091480 AX747013 NM_001242450	-59619	-	NM_007172 TSC_hg19_v1_chr22_+_45559808	95323	+	TSC_hg19_v1_chr22_+_45559866 AK314454 BC070133	95418	+	AK304223 TSC_hg19_v1_chr22_+_45559883 BC016055 AF107840 AL389949 AL389950	95572	+	AK092243|PHF21B|112885|PHD finger protein 21B##NM_001135862|PHF21B|112885|PHD finger protein 21B##CU012999|PHF21B|112885|PHD finger protein 21B##CU013287|PHF21B|112885|PHD finger protein 21B##CR456448|PHF21B|112885|PHD finger protein 21B##BC012187|PHF21B|112885|PHD finger protein 21B##NM_138415|PHF21B|112885|PHD finger protein 21B##AK299836|PHF21B|112885|PHD finger protein 21B##AK297317|PHF21B|112885|PHD finger protein 21B##AK091480|PHF21B|112885|PHD finger protein 21B##NM_001242450|PHF21B|112885|PHD finger protein 21B##NM_007172|NUP50|10762|nucleoporin 50kDa##AK314454|NUP50|10762|nucleoporin 50kDa##BC070133|NUP50|10762|nucleoporin 50kDa##AK304223|NUP50|10762|nucleoporin 50kDa##BC016055|NUP50|10762|nucleoporin 50kDa##AF107840|NUP50|10762|nucleoporin 50kDa##AL389949|NUP50|10762|nucleoporin 50kDa##AL389950|NUP50|10762|nucleoporin 50kDa	0.0	
chr3	124503436	124503525	reg1036246.p1	3.592	+	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	-54164	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	-54241	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	-199952	+	TSC_hg19_v1_chr3_-_124605863 AB587397 DQ892778 DQ896025 M35011 AK315429 J05633	102386	-	TSC_hg19_v1_chr3_-_124606213 BC006541 NM_002213 X53002	102731	-	AF286113 AB035807 AY358831 TSC_hg19_v1_chr3_-_124653596 NM_033049	150103	-	AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##DQ892778|ITGB5|3693|integrin, beta 5##DQ896025|ITGB5|3693|integrin, beta 5##M35011|ITGB5|3693|integrin, beta 5##AK315429|ITGB5|3693|integrin, beta 5##J05633|ITGB5|3693|integrin, beta 5##BC006541|ITGB5|3693|integrin, beta 5##NM_002213|ITGB5|3693|integrin, beta 5##X53002|ITGB5|3693|integrin, beta 5##AF286113|MUC13|56667|mucin 13, cell surface associated##AB035807|MUC13|56667|mucin 13, cell surface associated##AY358831|MUC13|56667|mucin 13, cell surface associated##NM_033049|MUC13|56667|mucin 13, cell surface associated	0.0	
chr6	149867131	149867231	reg1010684.p1	3.592	+	TSC_hg19_v1_chr6_-_149867172 AF357880 AK092069 AX747342 BX537536 BC107684	-14	-	TSC_hg19_v1_chr6_-_149867153 CU676802 GQ129364 GQ129365 BC064134	-37	-	TSC_hg19_v1_chr6_-_149806151 AB458221 AB458222 BC157832 NM_207360	-61038	-	BC020986 TSC_hg19_v1_chr6_-_149867195 AK315388 NM_139126	24	-	TSC_hg19_v1_chr6_+_149887361 AY358952	20194	+	TSC_hg19_v1_chr6_+_149887540 AK295690 BC014320 NM_138785 AK315729 AK289402 AK308844	20330	+	AF357880|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AK092069|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BX537536|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC107684|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##GQ129364|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##GQ129365|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##BC064134|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AB458221|ZC3H12D|340152|zinc finger CCCH-type containing 12D##AB458222|ZC3H12D|340152|zinc finger CCCH-type containing 12D##BC157832|ZC3H12D|340152|zinc finger CCCH-type containing 12D##NM_207360|ZC3H12D|340152|zinc finger CCCH-type containing 12D##BC020986|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AK315388|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##NM_139126|PPIL4|85313|peptidylprolyl isomerase (cyclophilin)-like 4##AY358952|C6orf72|116254|chromosome 6 open reading frame 72##AK295690|C6orf72|116254|chromosome 6 open reading frame 72##BC014320|C6orf72|116254|chromosome 6 open reading frame 72##NM_138785|C6orf72|116254|chromosome 6 open reading frame 72##AK315729|C6orf72|116254|chromosome 6 open reading frame 72##AK289402|C6orf72|116254|chromosome 6 open reading frame 72##AK308844|C6orf72|116254|chromosome 6 open reading frame 72	0.0	
chr6	152623222	152623344	reg1041195.p1	3.592	+	TSC_hg19_v1_chr6_-_152623240 AK310977	-32	-	X03635 AK304833 M69297 AF258449 AF258450 AF258451 NM_000125 TSC_hg19_v1_chr6_+_152128813 BC128573 BC128574 EU930361 AB587448 AB307713 AY750962 JF810888 U47678	-494417	+	NM_001122740 U68067	-494830	+	TSC_hg19_v1_chr6_-_152702331 BX537517	79058	-	AK056122 TSC_hg19_v1_chr6_-_152702456 BC039121	79191	-	AF535142 NM_033071 TSC_hg19_v1_chr6_-_152958011	334759	-	AK310977|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##X03635|ESR1|2099|estrogen receptor 1##AK304833|ESR1|2099|estrogen receptor 1##M69297|ESR1|2099|estrogen receptor 1##AF258449|ESR1|2099|estrogen receptor 1##AF258450|ESR1|2099|estrogen receptor 1##AF258451|ESR1|2099|estrogen receptor 1##NM_000125|ESR1|2099|estrogen receptor 1##BC128573|ESR1|2099|estrogen receptor 1##BC128574|ESR1|2099|estrogen receptor 1##AB307713|ESR1|2099|estrogen receptor 1##AY750962|ESR1|2099|estrogen receptor 1##JF810888|ESR1|2099|estrogen receptor 1##U47678|ESR1|2099|estrogen receptor 1##NM_001122740|ESR1|2099|estrogen receptor 1##U68067|ESR1|2099|estrogen receptor 1##BX537517|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AK056122|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##BC039121|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1	0.011944	
chr6	26097376	26097498	reg1003102.p1	3.592	+	U60319 AJ249335 AJ249336 AJ249337 AJ249338 AJ250635 NM_000410 NM_139003 NM_139004 NM_139006 NM_139007 NM_139008 NM_139009 NM_139010 NM_139011 AF144242 AF144243 AF144244 AF144245 BC074721 AF149804 AF150664 TSC_hg19_v1_chr6_+_26087639 AF079407 AF079408 AF079409 BC117201 BC117203 BC143887 AK293393 AK316502 AF115265 AF115264 AK300933 HQ258197 JN375754	-9860	+	TSC_hg19_v1_chr6_-_26056699 AB451259 AB451385 EU446960 EU832089 EU832181 AB590706 CU678090 BC002649 AK290947 D28457 NM_005319	-40761	-	BC058834 TSC_hg19_v1_chr6_+_26045611 BC127610 NM_003531	-51809	+	BC130558 BC130560 TSC_hg19_v1_chr6_+_26104160 AB590707 EU446977 HQ258693 NM_003542	6702	+	EU446962 HQ258096 BC130350 BC069517 CU686878 NM_005323 TSC_hg19_v1_chr6_-_26108364	10905	-	BC106899 EU446968 NM_003526 TSC_hg19_v1_chr6_-_26124155 BC009612 BC105595 AK312096	26712	-	U60319|HFE|3077|hemochromatosis##AJ249335|HFE|3077|hemochromatosis##AJ249336|HFE|3077|hemochromatosis##AJ249337|HFE|3077|hemochromatosis##AJ249338|HFE|3077|hemochromatosis##AJ250635|HFE|3077|hemochromatosis##NM_000410|HFE|3077|hemochromatosis##NM_139003|HFE|3077|hemochromatosis##NM_139004|HFE|3077|hemochromatosis##NM_139006|HFE|3077|hemochromatosis##NM_139007|HFE|3077|hemochromatosis##NM_139008|HFE|3077|hemochromatosis##NM_139009|HFE|3077|hemochromatosis##NM_139010|HFE|3077|hemochromatosis##NM_139011|HFE|3077|hemochromatosis##AF144242|HFE|3077|hemochromatosis##AF144243|HFE|3077|hemochromatosis##AF144244|HFE|3077|hemochromatosis##AF144245|HFE|3077|hemochromatosis##BC074721|HFE|3077|hemochromatosis##AF149804|HFE|3077|hemochromatosis##AF150664|HFE|3077|hemochromatosis##AF079407|HFE|3077|hemochromatosis##AF079408|HFE|3077|hemochromatosis##AF079409|HFE|3077|hemochromatosis##BC117201|HFE|3077|hemochromatosis##BC117203|HFE|3077|hemochromatosis##BC143887|HFE|3077|hemochromatosis##AK293393|HFE|3077|hemochromatosis##AK316502|HFE|3077|hemochromatosis##AF115265|HFE|3077|hemochromatosis##AF115264|HFE|3077|hemochromatosis##AK300933|HFE|3077|hemochromatosis##HQ258197|HFE|3077|hemochromatosis##JN375754|HFE|3077|hemochromatosis##AB451259|HIST1H1C|3006|histone cluster 1, H1c##AB451385|HIST1H1C|3006|histone cluster 1, H1c##EU446960|HIST1H1C|3006|histone cluster 1, H1c##EU832089|HIST1H1C|3006|histone cluster 1, H1c##EU832181|HIST1H1C|3006|histone cluster 1, H1c##BC002649|HIST1H1C|3006|histone cluster 1, H1c##AK290947|HIST1H1C|3006|histone cluster 1, H1c##NM_005319|HIST1H1C|3006|histone cluster 1, H1c##BC058834|HIST1H3C|8352|histone cluster 1, H3c##BC127610|HIST1H3C|8352|histone cluster 1, H3c##NM_003531|HIST1H3C|8352|histone cluster 1, H3c##BC130558|HIST1H4C|8364|histone cluster 1, H4c##BC130560|HIST1H4C|8364|histone cluster 1, H4c##EU446977|HIST1H4C|8364|histone cluster 1, H4c##HQ258693|HIST2H4B|554313|histone cluster 2, H4b##NM_003542|HIST1H4C|8364|histone cluster 1, H4c##EU446962|HIST1H1T|3010|histone cluster 1, H1t##HQ258096|HIST1H1T|3010|histone cluster 1, H1t##BC130350|HIST1H1T|3010|histone cluster 1, H1t##BC069517|HIST1H1T|3010|histone cluster 1, H1t##NM_005323|HIST1H1T|3010|histone cluster 1, H1t##BC106899|HIST1H2BC|8347|histone cluster 1, H2bc##EU446968|HIST1H2BG|8339|histone cluster 1, H2bg##NM_003526|HIST1H2BC|8347|histone cluster 1, H2bc##BC009612|HIST1H2BC|8347|histone cluster 1, H2bc##BC105595|HIST1H2BC|8347|histone cluster 1, H2bc	0.0	
chr9	130150641	130150822	reg1029508.p1	3.592	+	NM_032293 AK293732 AK095679	-123924	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-265701	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-265769	-	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	8715	+	TSC_hg19_v1_chr9_-_130186602 AK124330	35835	-	NM_007135 TSC_hg19_v1_chr9_+_130186700 AK054606 BC062309 AK302284	35950	+	NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_007135|ZNF79|7633|zinc finger protein 79##AK054606|ZNF79|7633|zinc finger protein 79##BC062309|ZNF79|7633|zinc finger protein 79##AK302284|ZNF79|7633|zinc finger protein 79	0.0	
chrX	1324991	1325097	reg1039475.p2	3.592	+	NM_000451 NM_006883 U89331	-739966	+	AK293506 NM_013239	-977355	-	NM_018390 BC064136 BC005028 BC000888 BC032072	-1126937	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	6540	-	NM_001161529 NM_001161531 NM_001161532 NM_006140 NM_172245 NM_172246 NM_172249 AK293086 AK301395 BC071835 M64445 BC002635 AL833597 AK309630 L29348 L29349 U93096 X17648	62670	+	NM_001161530 NM_172247 M73832 DQ893104 DQ896376 AB590144 CU687176 DQ841258 X54935	76539	+	NM_000451|SHOX|6473|short stature homeobox##NM_006883|SHOX|6473|short stature homeobox##U89331|SHOX|6473|short stature homeobox##AK293506|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_013239|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_018390|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC064136|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC005028|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC000888|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC032072|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2##NM_001161529|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161531|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161532|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_006140|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172245|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172246|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172249|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK293086|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK301395|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC071835|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M64445|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC002635|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AL833597|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK309630|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29348|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29349|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##U93096|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X17648|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161530|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172247|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M73832|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ893104|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ896376|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ841258|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X54935|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)	0.0	
chrX	8787362	8787455	reg1035814.p1	3.592	+	BC113449 BC143805 NM_001171186 BC112022 AF494343 NM_174951	-18008	-	TSC_hg19_v1_chrX_-_8700193 BC137426 BC137427 M97252 NM_000216 S60085	-87201	-	X60299 TSC_hg19_v1_chrX_-_8700155	-87265	-	BC120955 BC120956 NM_205849	213694	-	TSC_hg19_v1_chrX_+_9431357 AK289409 NM_001139466 NM_001139467 NM_001139468 AK290962 BC032708	643939	+	TSC_hg19_v1_chrX_+_9433108 Y12781 BC052304 NM_005647	645826	+	BC113449|FAM9A|171482|family with sequence similarity 9, member A##BC143805|FAM9A|171482|family with sequence similarity 9, member A##NM_001171186|FAM9A|171482|family with sequence similarity 9, member A##BC112022|FAM9A|171482|family with sequence similarity 9, member A##AF494343|FAM9A|171482|family with sequence similarity 9, member A##NM_174951|FAM9A|171482|family with sequence similarity 9, member A##BC137426|KAL1|3730|Kallmann syndrome 1 sequence##BC137427|KAL1|3730|Kallmann syndrome 1 sequence##M97252|KAL1|3730|Kallmann syndrome 1 sequence##NM_000216|KAL1|3730|Kallmann syndrome 1 sequence##S60085|KAL1|3730|Kallmann syndrome 1 sequence##X60299|KAL1|3730|Kallmann syndrome 1 sequence##BC120955|FAM9B|171483|family with sequence similarity 9, member B##BC120956|FAM9B|171483|family with sequence similarity 9, member B##NM_205849|FAM9B|171483|family with sequence similarity 9, member B##AK289409|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139466|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139467|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139468|TBL1X|6907|transducin (beta)-like 1X-linked##AK290962|TBL1X|6907|transducin (beta)-like 1X-linked##BC032708|TBL1X|6907|transducin (beta)-like 1X-linked##Y12781|TBL1X|6907|transducin (beta)-like 1X-linked##BC052304|TBL1X|6907|transducin (beta)-like 1X-linked##NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked	0.987822	CTCF.p2:11:0.988
chr11	33401649	33401717	reg1036644.p2	3.591	+	TSC_hg19_v1_chr11_+_33363104 AK304063	-38539	+	TSC_hg19_v1_chr11_+_33350077 AY425958	-51573	+	TSC_hg19_v1_chr11_+_33279873 AK293009	-121814	+	TSC_hg19_v1_chr11_+_33563772 AK124395 NM_012194	162141	+	NM_001166692	320602	-	AK309894 NM_001127223 NM_001127225 NM_001127226	342589	-	AK304063|HIPK3|10114|homeodomain interacting protein kinase 3##AY425958|HIPK3|10114|homeodomain interacting protein kinase 3##AK293009|HIPK3|10114|homeodomain interacting protein kinase 3##AK124395|C11orf41|25758|chromosome 11 open reading frame 41##NM_012194|C11orf41|25758|chromosome 11 open reading frame 41##NM_001166692|C11orf91|100131378|chromosome 11 open reading frame 91##AK309894|CD59|966|CD59 molecule, complement regulatory protein##NM_001127223|CD59|966|CD59 molecule, complement regulatory protein##NM_001127225|CD59|966|CD59 molecule, complement regulatory protein##NM_001127226|CD59|966|CD59 molecule, complement regulatory protein	0.0	
chr11	75479185	75479279	reg1029412.p2	3.591	+	AK026297 AK291998 AY157608 BC103876 BC103877 BC103878 NM_025098	-50334	+	AK123340 TSC_hg19_v1_chr11_-_75379695	-99558	-	AB527183 BC139780 AB058781 BC150254 NM_033063 NM_207577	-99786	-	TSC_hg19_v1_chr11_+_75479774 NM_032564 BC015234	545	+	TSC_hg19_v1_chr11_+_75479822 AB048286 AY780646 AY358532 AL834287 AF384161 CU677247 AY780647	691	+	NM_003369 TSC_hg19_v1_chr11_+_75526233 AK291011	46990	+	AK026297|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##AK291998|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##AY157608|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103876|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103877|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##BC103878|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##NM_025098|MOGAT2|80168|monoacylglycerol O-acyltransferase 2##AK123340|MAP6|4135|microtubule-associated protein 6##BC139780|MAP6|4135|microtubule-associated protein 6##AB058781|MAP6|4135|microtubule-associated protein 6##BC150254|MAP6|4135|microtubule-associated protein 6##NM_033063|MAP6|4135|microtubule-associated protein 6##NM_207577|MAP6|4135|microtubule-associated protein 6##NM_032564|DGAT2|84649|diacylglycerol O-acyltransferase 2##BC015234|DGAT2|84649|diacylglycerol O-acyltransferase 2##AB048286|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY358532|DGAT2|84649|diacylglycerol O-acyltransferase 2##AL834287|DGAT2|84649|diacylglycerol O-acyltransferase 2##AF384161|DGAT2|84649|diacylglycerol O-acyltransferase 2##AY780647|DGAT2|84649|diacylglycerol O-acyltransferase 2##NM_003369|UVRAG|7405|UV radiation resistance associated gene##AK291011|UVRAG|7405|UV radiation resistance associated gene	0.055253	
chr1	243220040	243220144	reg1020994.p2	3.591	+	AK098092 NM_152666	-532095	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	-607322	-	BC132986 BC132988 AF276659 BC127722 NM_001004343	-1057718	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	198264	-	TSC_hg19_v1_chr1_-_243418566 AK310003 BC050722	198480	-	TSC_hg19_v1_chr1_-_243418675 NM_001042404 NM_001042405 NM_014812	198599	-	AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa##AK310003|CEP170|9859|centrosomal protein 170kDa##BC050722|CEP170|9859|centrosomal protein 170kDa##NM_001042404|CEP170|9859|centrosomal protein 170kDa##NM_001042405|CEP170|9859|centrosomal protein 170kDa##NM_014812|CEP170|9859|centrosomal protein 170kDa	0.72125	CTCF.p2:23:0.721
chr15	56210150	56210253	reg1043729.p1	3.591	+	BC136605 BC144284 BC144285 AL832063 NM_198400	-885	-	AY630258 NM_173814 TSC_hg19_v1_chr15_-_56035276	-174975	-	AF457207 NM_015617	-329152	-	TSC_hg19_v1_chr15_-_56285776 BC035707 AK304394 AY550969 BC152452 BC152562 D42055 NM_006154	75594	-	TSC_hg19_v1_chr15_-_56388663 AL832584	178496	-	TSC_hg19_v1_chr15_-_56535479 NM_022841	325281	-	BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY630258|PRTG|283659|protogenin##NM_173814|PRTG|283659|protogenin##AF457207|PYGO1|26108|pygopus homolog 1 (Drosophila)##NM_015617|PYGO1|26108|pygopus homolog 1 (Drosophila)##BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832584|RFX7|64864|regulatory factor X, 7##NM_022841|RFX7|64864|regulatory factor X, 7	0.891706	CTCF.p2:18:0.892
chr15	64915177	64915357	reg1033414.p2	3.591	+	AB056456 TSC_hg19_v1_chr15_+_64885153	-30114	+	NM_015042	-123649	+	TSC_hg19_v1_chr15_+_64752786 BC142647	-162408	+	BC119629 BC119630 BC148316 BC127630 TSC_hg19_v1_chr15_-_64995360 BC127631 AF242520 AF242521	80093	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	80135	-	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	80202	-	NM_015042|ZNF609|23060|zinc finger protein 609##BC142647|ZNF609|23060|zinc finger protein 609##BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2##BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2	0.0	
chr17	266786	266871	reg1038996.p1	3.591	+	TSC_hg19_v1_chr17_+_260159 AK128660 NM_001013672 BC141806 BC057385 BC070116 CU687042	-6648	+	TSC_hg19_v1_chr17_-_202619 NM_001190411 NM_001190412 NM_001190413 NM_006987	-64204	-	TSC_hg19_v1_chr17_-_202589 AK000469 AK291950	-64248	-	CU675257 EU021218 EU434648 EU434649 EU434650 AF246287 AY444797 BC006116 TSC_hg19_v1_chr17_-_618080 BC040223 AF318335 AK290343 AK092532 AX747587 NM_001128159 NM_018289	351211	-	TSC_hg19_v1_chr17_+_635806 AF477201 BC026023 AK025935 AK292065 NM_024792 CU693104 AK125146	368958	+	TSC_hg19_v1_chr17_-_655412 AB463052 AF173856 BC036024 AK302722 BC032084 BC020062	388592	-	AK128660|C17orf97|400566|chromosome 17 open reading frame 97##NM_001013672|C17orf97|400566|chromosome 17 open reading frame 97##BC141806|C17orf97|400566|chromosome 17 open reading frame 97##BC057385|C17orf97|400566|chromosome 17 open reading frame 97##BC070116|C17orf97|400566|chromosome 17 open reading frame 97##NM_001190411|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190412|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190413|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_006987|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AK000469|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AK291950|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##EU021218|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434648|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434649|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434650|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF246287|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AY444797|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC006116|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC040223|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF318335|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK290343|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK092532|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_001128159|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_018289|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF477201|FAM57A|79850|family with sequence similarity 57, member A##BC026023|FAM57A|79850|family with sequence similarity 57, member A##AK025935|FAM57A|79850|family with sequence similarity 57, member A##AK292065|FAM57A|79850|family with sequence similarity 57, member A##NM_024792|FAM57A|79850|family with sequence similarity 57, member A##AK125146|FAM57A|79850|family with sequence similarity 57, member A##AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4##AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4	0.0	
chr22	23274207	23274387	reg1034020.p2	3.591	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	-44214	+	TSC_hg19_v1_chr22_+_23222900 AK127411 S77601 X57802 X57803 X57816 X57818 AB369252 AF026919 AF026925 AY190825 L26400 AF490955 AF490961	-51368	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	-60604	+	TSC_hg19_v1_chr22_+_23412527 BC037333 BC026342 NM_002073	138219	+	AK312519 TSC_hg19_v1_chr22_+_23412728 AK293653	138432	+	BC008986 AF133587 NM_014433 AK299530 AK310327	209946	-	AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AB369252|CYAT1|100290481|immunoglobulin lambda light chain-like##BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3##BC037333|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC026342|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##NM_002073|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK312519|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##AK293653|GNAZ|2781|guanine nucleotide binding protein (G protein), alpha z polypeptide##BC008986|RTDR1|27156|rhabdoid tumor deletion region gene 1##AF133587|RTDR1|27156|rhabdoid tumor deletion region gene 1##NM_014433|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK299530|RTDR1|27156|rhabdoid tumor deletion region gene 1##AK310327|RTDR1|27156|rhabdoid tumor deletion region gene 1	0.0	
chr22	33964272	33964367	reg1029784.p2	3.591	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-509964	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-561593	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-766567	+	AJ007583 AB011181 NM_004737 NM_133642	352051	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1497830	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1689157	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr2	69001877	69002018	reg1037347.p1	3.591	+	NM_001007231 NM_001166277 AK297056 TSC_hg19_v1_chr2_+_68962066 AK310742 AK290396	-39874	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	-128994	+	TSC_hg19_v1_chr2_+_68694716 AK290841 NM_173545 AK308186 BC041144 CU691972	-307183	+	BC032222 NM_001166276 NM_014882 AK311669 TSC_hg19_v1_chr2_+_69002068 BC039591 AK297157 AK298669 D29642	78	+	BC069080 BC101734 BC105063 AF101441 NM_014482	96628	-	BC110809 AJ966788 AY943908 AF494509 AY358664 NM_182536	178109	-	NM_001007231|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166277|ARHGAP25|9938|Rho GTPase activating protein 25##AK297056|ARHGAP25|9938|Rho GTPase activating protein 25##AK310742|ARHGAP25|9938|Rho GTPase activating protein 25##AK290396|ARHGAP25|9938|Rho GTPase activating protein 25##AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1##AK290841|APLF|200558|aprataxin and PNKP like factor##NM_173545|APLF|200558|aprataxin and PNKP like factor##AK308186|APLF|200558|aprataxin and PNKP like factor##BC041144|APLF|200558|aprataxin and PNKP like factor##BC032222|ARHGAP25|9938|Rho GTPase activating protein 25##NM_001166276|ARHGAP25|9938|Rho GTPase activating protein 25##NM_014882|ARHGAP25|9938|Rho GTPase activating protein 25##AK311669|ARHGAP25|9938|Rho GTPase activating protein 25##BC039591|ARHGAP25|9938|Rho GTPase activating protein 25##AK297157|ARHGAP25|9938|Rho GTPase activating protein 25##AK298669|ARHGAP25|9938|Rho GTPase activating protein 25##D29642|ARHGAP25|9938|Rho GTPase activating protein 25##BC069080|BMP10|27302|bone morphogenetic protein 10##BC101734|BMP10|27302|bone morphogenetic protein 10##BC105063|BMP10|27302|bone morphogenetic protein 10##AF101441|BMP10|27302|bone morphogenetic protein 10##NM_014482|BMP10|27302|bone morphogenetic protein 10##BC110809|GKN2|200504|gastrokine 2##AJ966788|GKN2|200504|gastrokine 2##AY943908|GKN2|200504|gastrokine 2##AF494509|GKN2|200504|gastrokine 2##AY358664|GKN2|200504|gastrokine 2##NM_182536|GKN2|200504|gastrokine 2	0.0	
chr3	152292596	152292776	reg1006368.p2	3.591	+	AY358260 NM_001123228	-233908	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-275493	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	-305341	-	NM_002563 Z49205	260049	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	587340	+	TSC_hg19_v1_chr3_+_152880058 BC012362	587362	+	AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family	0.0	
chr4	153225304	153225390	reg1026808.p1	3.591	+	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	-543206	-	TSC_hg19_v1_chr4_+_152330327 NM_001109977	-894986	+	BC121109 BC121110 NM_183375	-1027023	+	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	48549	-	NM_001013415 AY008274	78317	-	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	230947	-	AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##NM_001109977|FAM160A1|729830|family with sequence similarity 160, member A1##BC121109|PRSS48|345062|protease, serine, 48##BC121110|PRSS48|345062|protease, serine, 48##NM_183375|PRSS48|345062|protease, serine, 48##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7	0.067882	
chr5	131861273	131861362	reg1029046.p2	3.591	+	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	-34836	-	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-114689	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-155809	+	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	17875	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	31323	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	132573	+	X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13	0.0	
chr6	159883177	159883263	reg1046179.p1	3.591	+	DQ009660 NM_032532 TSC_hg19_v1_chr6_+_159590431	-292790	+	TSC_hg19_v1_chr6_-_159466024 BC111731 AK097090 BC015859 AL832662 AF385429 AF385430 NM_054114 NM_138810 NM_152133	-417119	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	-461999	-	AY280720 AY280721 AY280719 BT006967 AB528757 DQ890587 DQ893752 AM392836 X07834 AK313082 BC012423 BC035422 X15132 X59445 BC016934 TSC_hg19_v1_chr6_-_160114277 Y00472 AK296809 AK304766 AL050388 X14322 M36693 Y00985	231030	-	TSC_hg19_v1_chr6_-_160114357 NM_000636 NM_001024465 NM_001024466	231142	-	TSC_hg19_v1_chr6_+_160148149 AK290854 AF374416 NM_004906 NM_152858 BC000383 BC004432 BC069192	264952	+	DQ009660|FNDC1|84624|fibronectin type III domain containing 1##NM_032532|FNDC1|84624|fibronectin type III domain containing 1##BC111731|TAGAP|117289|T-cell activation RhoGTPase activating protein##AK097090|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC015859|TAGAP|117289|T-cell activation RhoGTPase activating protein##AL832662|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385429|TAGAP|117289|T-cell activation RhoGTPase activating protein##AF385430|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_054114|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_138810|TAGAP|117289|T-cell activation RhoGTPase activating protein##NM_152133|TAGAP|117289|T-cell activation RhoGTPase activating protein##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AY280720|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280721|SOD2|6648|superoxide dismutase 2, mitochondrial##AY280719|SOD2|6648|superoxide dismutase 2, mitochondrial##BT006967|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ890587|SOD2|6648|superoxide dismutase 2, mitochondrial##DQ893752|SOD2|6648|superoxide dismutase 2, mitochondrial##AM392836|SOD2|6648|superoxide dismutase 2, mitochondrial##X07834|SOD2|6648|superoxide dismutase 2, mitochondrial##AK313082|SOD2|6648|superoxide dismutase 2, mitochondrial##BC012423|SOD2|6648|superoxide dismutase 2, mitochondrial##BC035422|SOD2|6648|superoxide dismutase 2, mitochondrial##X15132|SOD2|6648|superoxide dismutase 2, mitochondrial##X59445|SOD2|6648|superoxide dismutase 2, mitochondrial##BC016934|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00472|SOD2|6648|superoxide dismutase 2, mitochondrial##AK296809|SOD2|6648|superoxide dismutase 2, mitochondrial##AK304766|SOD2|6648|superoxide dismutase 2, mitochondrial##AL050388|SOD2|6648|superoxide dismutase 2, mitochondrial##X14322|SOD2|6648|superoxide dismutase 2, mitochondrial##M36693|SOD2|6648|superoxide dismutase 2, mitochondrial##Y00985|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_000636|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024465|SOD2|6648|superoxide dismutase 2, mitochondrial##NM_001024466|SOD2|6648|superoxide dismutase 2, mitochondrial##AK290854|WTAP|9589|Wilms tumor 1 associated protein##AF374416|WTAP|9589|Wilms tumor 1 associated protein##NM_004906|WTAP|9589|Wilms tumor 1 associated protein##NM_152858|WTAP|9589|Wilms tumor 1 associated protein##BC000383|WTAP|9589|Wilms tumor 1 associated protein##BC004432|WTAP|9589|Wilms tumor 1 associated protein##BC069192|WTAP|9589|Wilms tumor 1 associated protein	0.417642	CTCF.p2:33:0.418
chr6	22194302	22194416	reg1026183.p1	3.591	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	-527700	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	-599987	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1659636	+	BC015850 NM_000948	103370	-	X54394 X54393 GQ305133 M58594 NM_001163558	108688	-	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	375366	+	AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1	0.0	
chr6	52254665	52254845	reg1036003.p2	3.591	+	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	-27798	+	TSC_hg19_v1_chr6_-_52149551 D38073 AK299566 NM_002388 AK301704	-105176	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	-105235	-	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	30323	+	AK297632 NM_001172420	31049	+	DQ891068 DQ894250 D31762 TSC_hg19_v1_chr6_-_52441798	187003	-	NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##D38073|MCM3|4172|minichromosome maintenance complex component 3##AK299566|MCM3|4172|minichromosome maintenance complex component 3##NM_002388|MCM3|4172|minichromosome maintenance complex component 3##AK301704|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3##NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ891068|TRAM2|9697|translocation associated membrane protein 2##DQ894250|TRAM2|9697|translocation associated membrane protein 2##D31762|TRAM2|9697|translocation associated membrane protein 2	0.0	
chr6	7425337	7425450	reg1042536.p1	3.591	+	AF258661 NM_153005	-22514	+	TSC_hg19_v1_chr6_+_7390042 AY094356 AK314467 BC006104 NM_031480 AK054568	-35295	+	AF414185 NM_001170692 NM_001170693 NM_205864 TSC_hg19_v1_chr6_-_7389974	-35426	-	TSC_hg19_v1_chr6_+_7541838 AB209992 AK301676 AK296756	116455	+	TSC_hg19_v1_chr6_+_7541865 HM151899 M77830 NM_001008844 NM_004415 BC140802 BC144587	116475	+	TSC_hg19_v1_chr6_+_7541904 AB621818 AK304182	116537	+	AF258661|RIOK1|83732|RIO kinase 1 (yeast)##NM_153005|RIOK1|83732|RIO kinase 1 (yeast)##AY094356|RIOK1|83732|RIO kinase 1 (yeast)##AK314467|RIOK1|83732|RIO kinase 1 (yeast)##BC006104|RIOK1|83732|RIO kinase 1 (yeast)##NM_031480|RIOK1|83732|RIO kinase 1 (yeast)##AK054568|RIOK1|83732|RIO kinase 1 (yeast)##AF414185|CAGE1|285782|cancer antigen 1##NM_001170692|CAGE1|285782|cancer antigen 1##NM_001170693|CAGE1|285782|cancer antigen 1##NM_205864|CAGE1|285782|cancer antigen 1##AB209992|DSP|1832|desmoplakin##AK301676|DSP|1832|desmoplakin##AK296756|DSP|1832|desmoplakin##HM151899|DSP|1832|desmoplakin##M77830|DSP|1832|desmoplakin##NM_001008844|DSP|1832|desmoplakin##NM_004415|DSP|1832|desmoplakin##BC140802|DSP|1832|desmoplakin##BC144587|DSP|1832|desmoplakin##AK304182|DSP|1832|desmoplakin	0.504298	CTCF.p2:-15:0.504
chr8	144102502	144102596	reg1036512.p1	3.591	+	TSC_hg19_v1_chr8_+_144102304 BC119708 BC119709 AB529045 U56145	-222	+	TSC_hg19_v1_chr8_+_144099945 NM_001127213 NM_002346 AK223074 AK129615 AK311983 BC003392 U42376 Z68179	-2607	+	AB463555 NM_000498 X54741	-103293	-	TSC_hg19_v1_chr8_+_144120683 BC073830 AK094450 NM_173687 BC120993 BC063497	18126	+	NM_002347	138907	-	BC030192 AB012293 TSC_hg19_v1_chr8_-_144241700	139140	-	BC119708|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119709|LY6E|4061|lymphocyte antigen 6 complex, locus E##U56145|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_001127213|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002346|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK223074|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK129615|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK311983|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC003392|LY6E|4061|lymphocyte antigen 6 complex, locus E##U42376|LY6E|4061|lymphocyte antigen 6 complex, locus E##Z68179|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_000498|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##X54741|CYP11B2|1585|cytochrome P450, family 11, subfamily B, polypeptide 2##BC073830|C8orf31|286122|chromosome 8 open reading frame 31##AK094450|C8orf31|286122|chromosome 8 open reading frame 31##NM_173687|C8orf31|286122|chromosome 8 open reading frame 31##BC120993|C8orf31|286122|chromosome 8 open reading frame 31##BC063497|C8orf31|286122|chromosome 8 open reading frame 31##NM_002347|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H##AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H	0.649918	CTCF.p2:-25:0.650
chr8	29499682	29499863	reg1033762.p1	3.591	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-291702	-	AL137704 NM_057158	-293451	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-379158	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	440702	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	440800	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	453171	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chr8	66045128	66045221	reg1037720.p1	3.591	+	TSC_hg19_v1_chr8_-_65711295 BC029155 AF029403 AF127090 BC136574 NM_004820	-333895	-	TSC_hg19_v1_chr8_+_65493611 AK091333	-551510	+	NM_152414 AK293979	-552316	+	TSC_hg19_v1_chr8_-_66546394 AK001373	501221	-	TSC_hg19_v1_chr8_-_66546404 AK304463	501232	-	TSC_hg19_v1_chr8_-_66546413 BC011607 BC018846 NM_018120	501258	-	BC029155|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF029403|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AF127090|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##BC136574|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##NM_004820|CYP7B1|9420|cytochrome P450, family 7, subfamily B, polypeptide 1##AK091333|BHLHE22|27319|basic helix-loop-helix family, member e22##NM_152414|BHLHE22|27319|basic helix-loop-helix family, member e22##AK293979|BHLHE22|27319|basic helix-loop-helix family, member e22##AK001373|ARMC1|55156|armadillo repeat containing 1##AK304463|ARMC1|55156|armadillo repeat containing 1##BC011607|ARMC1|55156|armadillo repeat containing 1##BC018846|ARMC1|55156|armadillo repeat containing 1##NM_018120|ARMC1|55156|armadillo repeat containing 1	0.99103	CTCF.p2:-3:0.991
chr9	115514032	115514102	reg1046623.p1	3.591	+	TSC_hg19_v1_chr9_+_115513056 NM_001012994	-976	+	TSC_hg19_v1_chr9_-_115480398 BC065210 AK310007 BC014881 NM_021218 AK000637	-33679	-	AF161411 TSC_hg19_v1_chr9_-_115480339 AF161409	-33729	-	TSC_hg19_v1_chr9_+_115631819 AK129991	117798	+	CU690566 BC048285 AK314414 AK055571 AF242557 NM_033051	139009	-	AK095843 NM_001101338	260404	-	NM_001012994|SNX30|401548|sorting nexin family member 30##BC065210|C9orf80|58493|chromosome 9 open reading frame 80##AK310007|C9orf80|58493|chromosome 9 open reading frame 80##BC014881|C9orf80|58493|chromosome 9 open reading frame 80##NM_021218|C9orf80|58493|chromosome 9 open reading frame 80##AK000637|C9orf80|58493|chromosome 9 open reading frame 80##AF161411|C9orf80|58493|chromosome 9 open reading frame 80##AF161409|C9orf80|58493|chromosome 9 open reading frame 80##AK129991|SNX30|401548|sorting nexin family member 30##BC048285|SLC46A2|57864|solute carrier family 46, member 2##AK314414|SLC46A2|57864|solute carrier family 46, member 2##AK055571|SLC46A2|57864|solute carrier family 46, member 2##AF242557|SLC46A2|57864|solute carrier family 46, member 2##NM_033051|SLC46A2|57864|solute carrier family 46, member 2##AK095843|ZNF883|169834|zinc finger protein 883##NM_001101338|ZNF883|169834|zinc finger protein 883	0.0	
chr12	110562289	110562462	reg1030025.p2	3.590	+	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	-154	+	AK097461 NM_207435	-56876	-	TSC_hg19_v1_chr12_-_110486328 AK021447 BC041968	-76046	-	TSC_hg19_v1_chr12_+_110719041 NM_001681 NM_170665	156660	+	TSC_hg19_v1_chr12_+_110719528 M23114 BC035588 M23115 CU690124	156993	+	TSC_hg19_v1_chr12_-_110841470 BC098264 BC098295 BC098362 BC099732 BC111798 AF191340 BC148236 BC040130	279064	-	NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK097461|C12orf76|400073|chromosome 12 open reading frame 76##NM_207435|C12orf76|400073|chromosome 12 open reading frame 76##AK021447|C12orf76|400073|chromosome 12 open reading frame 76##BC041968|C12orf76|400073|chromosome 12 open reading frame 76##NM_001681|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_170665|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23114|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC035588|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23115|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC098264|ANAPC7|51434|anaphase promoting complex subunit 7##BC098295|ANAPC7|51434|anaphase promoting complex subunit 7##BC098362|ANAPC7|51434|anaphase promoting complex subunit 7##BC099732|ANAPC7|51434|anaphase promoting complex subunit 7##BC111798|ANAPC7|51434|anaphase promoting complex subunit 7##AF191340|ANAPC7|51434|anaphase promoting complex subunit 7##BC148236|ANAPC7|51434|anaphase promoting complex subunit 7##BC040130|ANAPC7|51434|anaphase promoting complex subunit 7	0.01711	
chr13	100006657	100006761	reg1037481.p1	3.590	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-47011	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-96095	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-153590	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	146991	+	TSC_hg19_v1_chr13_+_100153777 BC130293	147073	+	BC041830 TSC_hg19_v1_chr13_+_100229390	222668	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.0	
chr16	17096540	17096665	reg1034251.p2	3.590	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-770072	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-770114	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-770120	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	468203	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1476789	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1701494	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr17	1991008	1991126	reg1038391.p2	3.590	+	DQ187313 NM_001098202	-31510	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-32669	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-45759	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	215745	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	215973	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	216185	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.0	
chr18	51857651	51857777	reg1038949.p1	3.590	+	NM_007195 TSC_hg19_v1_chr18_+_51795943 AK301578 AF140501 BC032617 BC032662 AL136670 AF245438 AK093688 AB463184 AM392978 DQ890893 DQ896811 CU689468	-61774	+	TSC_hg19_v1_chr18_-_51751035 AF072242 NM_003927 NM_015832	-106637	-	TSC_hg19_v1_chr18_-_51750997 BC032638	-106749	-	AB528241 AF480305 NM_139171	23228	-	BX640877 NM_173529	27456	+	AK096425 NM_173629	400675	+	NM_007195|POLI|11201|polymerase (DNA directed) iota##AK301578|POLI|11201|polymerase (DNA directed) iota##AF140501|POLI|11201|polymerase (DNA directed) iota##BC032617|POLI|11201|polymerase (DNA directed) iota##BC032662|POLI|11201|polymerase (DNA directed) iota##AL136670|POLI|11201|polymerase (DNA directed) iota##AF245438|POLI|11201|polymerase (DNA directed) iota##AK093688|POLI|11201|polymerase (DNA directed) iota##AM392978|POLI|11201|polymerase (DNA directed) iota##DQ890893|POLI|11201|polymerase (DNA directed) iota##DQ896811|POLI|11201|polymerase (DNA directed) iota##AF072242|MBD2|8932|methyl-CpG binding domain protein 2##NM_003927|MBD2|8932|methyl-CpG binding domain protein 2##NM_015832|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2##AF480305|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##NM_139171|STARD6|147323|StAR-related lipid transfer (START) domain containing 6##BX640877|C18orf54|162681|chromosome 18 open reading frame 54##NM_173529|C18orf54|162681|chromosome 18 open reading frame 54##AK096425|C18orf26|284254|chromosome 18 open reading frame 26##NM_173629|C18orf26|284254|chromosome 18 open reading frame 26	0.619736	CTCF.p2:5:0.620
chr21	33153293	33153425	reg1036922.p1	3.590	+	TSC_hg19_v1_chr21_-_33104407 BC014921 NM_001145444 NM_001145445 NM_020706	-48923	-	BC043353 TSC_hg19_v1_chr21_-_33104396	-48966	-	AL834304 BC052286 BC064990 TSC_hg19_v1_chr21_-_33104271 AK057840 AK308406	-49087	-	TSC_hg19_v1_chr21_+_33245863 AJ271722 NM_014586	92361	+	CU692128 TSC_hg19_v1_chr21_-_33651338 AF387845 AF231921 AK075281 BC042917 NM_018944 AK312073	498036	-	AF454915 AF454916 NM_178817 NM_206898	510764	+	BC014921|SCAF4|57466|SR-related CTD-associated factor 4##NM_001145444|SCAF4|57466|SR-related CTD-associated factor 4##NM_001145445|SCAF4|57466|SR-related CTD-associated factor 4##NM_020706|SCAF4|57466|SR-related CTD-associated factor 4##BC043353|SCAF4|57466|SR-related CTD-associated factor 4##AL834304|SCAF4|57466|SR-related CTD-associated factor 4##BC052286|SCAF4|57466|SR-related CTD-associated factor 4##BC064990|SCAF4|57466|SR-related CTD-associated factor 4##AK057840|SCAF4|57466|SR-related CTD-associated factor 4##AK308406|SCAF4|57466|SR-related CTD-associated factor 4##AJ271722|HUNK|30811|hormonally up-regulated Neu-associated kinase##NM_014586|HUNK|30811|hormonally up-regulated Neu-associated kinase##AF387845|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AF231921|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AK075281|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##BC042917|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##NM_018944|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AK312073|MIS18A|54069|MIS18 kinetochore protein homolog A (S. pombe)##AF454915|MRAP|56246|melanocortin 2 receptor accessory protein##AF454916|MRAP|56246|melanocortin 2 receptor accessory protein##NM_178817|MRAP|56246|melanocortin 2 receptor accessory protein##NM_206898|MRAP|56246|melanocortin 2 receptor accessory protein	0.252769	CTCF.p2:-15:0.253
chr21	38936689	38936811	reg1031807.p1	3.590	+	NM_130438 NM_001396 U52373 D85759 U58496	-144130	+	D86550 NM_130436	-145544	+	AF108830 NM_101395 AB015283 AB015284	-196880	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	351961	-	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	556651	-	BC013327 NM_002243	691913	+	NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.198083	
chr2	238383552	238383699	reg1010307.p1	3.590	+	TSC_hg19_v1_chr2_-_238322840 NM_004369 NM_057164 NM_057165 NM_057166 NM_057167	-60781	-	TSC_hg19_v1_chr2_-_238322815 X52022	-60804	-	AK303290 TSC_hg19_v1_chr2_-_238322814	-60811	-	TSC_hg19_v1_chr2_+_238395893 NM_001042467 NM_024101 AK296745 AK022207 AK292929 AK310821 AK225381 BC001653 BC051269	12271	+	AB015419 BC069081 BC069284 NM_015893	91591	+	TSC_hg19_v1_chr2_-_238499327 BC009827 BC050426 AL136645	115721	-	NM_004369|COL6A3|1293|collagen, type VI, alpha 3##NM_057164|COL6A3|1293|collagen, type VI, alpha 3##NM_057165|COL6A3|1293|collagen, type VI, alpha 3##NM_057166|COL6A3|1293|collagen, type VI, alpha 3##NM_057167|COL6A3|1293|collagen, type VI, alpha 3##X52022|COL6A3|1293|collagen, type VI, alpha 3##AK303290|COL6A3|1293|collagen, type VI, alpha 3##NM_001042467|MLPH|79083|melanophilin##NM_024101|MLPH|79083|melanophilin##AK296745|MLPH|79083|melanophilin##AK022207|MLPH|79083|melanophilin##AK292929|MLPH|79083|melanophilin##AK310821|MLPH|79083|melanophilin##AK225381|MLPH|79083|melanophilin##BC001653|MLPH|79083|melanophilin##BC051269|MLPH|79083|melanophilin##AB015419|PRLH|51052|prolactin releasing hormone##BC069081|PRLH|51052|prolactin releasing hormone##BC069284|PRLH|51052|prolactin releasing hormone##NM_015893|PRLH|51052|prolactin releasing hormone##BC009827|RAB17|64284|RAB17, member RAS oncogene family##BC050426|RAB17|64284|RAB17, member RAS oncogene family##AL136645|RAB17|64284|RAB17, member RAS oncogene family	0.0	
chr6	41495966	41496143	reg1042192.p1	3.590	+	NM_001199509 NM_001199510 NM_004828 AJ010099 AJ010100 BC166647	-192488	+	CU676054 DQ892009 DQ895198 AY074783 TSC_hg19_v1_chr6_-_41254418 AK223264 AK292162 AK301519 AK313104 BC017773 AF287008 NM_001242589 NM_001242590 NM_018643	-241630	-	AY358271 NM_198153 BC101780 BC105101 BC143652	-299986	+	TSC_hg19_v1_chr6_+_41514135 BC040962 NM_001012426 NM_001012427 NM_138457	18105	+	TSC_hg19_v1_chr6_+_41514342 BC052803	18283	+	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	110168	+	NM_001199509|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_001199510|NCR2|9436|natural cytotoxicity triggering receptor 2##NM_004828|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010099|NCR2|9436|natural cytotoxicity triggering receptor 2##AJ010100|NCR2|9436|natural cytotoxicity triggering receptor 2##BC166647|NCR2|9436|natural cytotoxicity triggering receptor 2##DQ892009|TREM1|54210|triggering receptor expressed on myeloid cells 1##DQ895198|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY074783|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK223264|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK292162|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK301519|TREM1|54210|triggering receptor expressed on myeloid cells 1##AK313104|TREM1|54210|triggering receptor expressed on myeloid cells 1##BC017773|TREM1|54210|triggering receptor expressed on myeloid cells 1##AF287008|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242589|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_001242590|TREM1|54210|triggering receptor expressed on myeloid cells 1##NM_018643|TREM1|54210|triggering receptor expressed on myeloid cells 1##AY358271|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##NM_198153|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC101780|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC105101|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC143652|TREML4|285852|triggering receptor expressed on myeloid cells-like 4##BC040962|FOXP4|116113|forkhead box P4##NM_001012426|FOXP4|116113|forkhead box P4##NM_001012427|FOXP4|116113|forkhead box P4##NM_138457|FOXP4|116113|forkhead box P4##BC052803|FOXP4|116113|forkhead box P4##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor	0.0	
chr8	119674769	119674855	reg1042108.p1	3.590	+	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	-40605	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	-40687	-	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	-550851	-	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	289408	-	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	404657	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	545827	+	NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)	0.099693	
chrX	117761464	117761584	reg1034685.p1	3.590	+	AY692226 NM_144658 TSC_hg19_v1_chrX_+_117629874	-131652	+	TSC_hg19_v1_chrX_+_117526665 AL834210	-234837	+	TSC_hg19_v1_chrX_+_117480490 AM393332 AM393787 EU831942 EU832037 AK304432	-281062	+	TSC_hg19_v1_chrX_+_117861562 BC015768 NM_001560 Y10659 U81379 U81380 AK313467 Y09328 BC009960 AB528371 DQ893454 DQ896296 AB209849	100043	+	TSC_hg19_v1_chrX_+_117957786 AK122676 BC036572 BC031241 BC057841 NM_173798 BC018066	196298	+	TSC_hg19_v1_chrX_+_118108580 AK091777 AK290198 AX747177	347056	+	AY692226|DOCK11|139818|dedicator of cytokinesis 11##NM_144658|DOCK11|139818|dedicator of cytokinesis 11##AL834210|WDR44|54521|WD repeat domain 44##AM393332|WDR44|54521|WD repeat domain 44##AM393787|WDR44|54521|WD repeat domain 44##EU831942|WDR44|54521|WD repeat domain 44##EU832037|WDR44|54521|WD repeat domain 44##AK304432|WDR44|54521|WD repeat domain 44##BC015768|IL13RA1|3597|interleukin 13 receptor, alpha 1##NM_001560|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y10659|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81379|IL13RA1|3597|interleukin 13 receptor, alpha 1##U81380|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK313467|IL13RA1|3597|interleukin 13 receptor, alpha 1##Y09328|IL13RA1|3597|interleukin 13 receptor, alpha 1##BC009960|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ893454|IL13RA1|3597|interleukin 13 receptor, alpha 1##DQ896296|IL13RA1|3597|interleukin 13 receptor, alpha 1##AB209849|IL13RA1|3597|interleukin 13 receptor, alpha 1##AK122676|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC036572|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC031241|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC057841|ZCCHC12|170261|zinc finger, CCHC domain containing 12##NM_173798|ZCCHC12|170261|zinc finger, CCHC domain containing 12##BC018066|ZCCHC12|170261|zinc finger, CCHC domain containing 12##AK091777|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3##AK290198|LONRF3|79836|LON peptidase N-terminal domain and ring finger 3	0.0	
chrX	130902448	130902572	reg1019859.p2	3.590	+	BC137050 AB529233 NM_001004486	-224512	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-479098	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-479248	-	TSC_hg19_v1_chrX_-_130964633 AK097911	62141	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	254811	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	255130	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.0	
chr11	75119049	75119139	reg1037664.p1	3.589	+	TSC_hg19_v1_chr11_+_75110562 D28344 AK130960 BC034149 NM_001005 AK129794 AK313051 BC013231 BC100284 X55715 BC071917 AK223048 BC003137 BC071669 S42658 AB464166 CU678394 DQ892888 DQ896136 U14990 U14991 U14992 BC003577 BC013196 AB062288	-8519	+	AF084040 AF084940 FJ348262 CU678548 AB462955 TSC_hg19_v1_chr11_-_75062708 AK289718 BC003636 NM_004041 NM_020251	-56278	-	NM_001195528	-167145	+	HQ258227 BC132708 BC132710 TSC_hg19_v1_chr11_-_75141083 AK091109 AX746783	21966	-	TSC_hg19_v1_chr11_-_75141247 BC042952 BC057763	22137	-	TSC_hg19_v1_chr11_-_75141540 NM_001039548	22501	-	D28344|RPS3|6188|ribosomal protein S3##AK130960|RPS3|6188|ribosomal protein S3##BC034149|RPS3|6188|ribosomal protein S3##NM_001005|RPS3|6188|ribosomal protein S3##AK129794|RPS3|6188|ribosomal protein S3##AK313051|RPS3|6188|ribosomal protein S3##BC013231|RPS3|6188|ribosomal protein S3##BC100284|RPS3|6188|ribosomal protein S3##X55715|RPS3|6188|ribosomal protein S3##BC071917|RPS3|6188|ribosomal protein S3##AK223048|RPS3|6188|ribosomal protein S3##BC003137|RPS3|6188|ribosomal protein S3##BC071669|RPS3|6188|ribosomal protein S3##S42658|RPS3|6188|ribosomal protein S3##DQ892888|RPS3|6188|ribosomal protein S3##DQ896136|RPS3|6188|ribosomal protein S3##U14990|RPS3|6188|ribosomal protein S3##U14991|RPS3|6188|ribosomal protein S3##U14992|RPS3|6188|ribosomal protein S3##BC003577|RPS3|6188|ribosomal protein S3##BC013196|RPS3|6188|ribosomal protein S3##AB062288|RPS3|6188|ribosomal protein S3##AF084040|ARRB1|408|arrestin, beta 1##AF084940|ARRB1|408|arrestin, beta 1##FJ348262|ARRB1|408|arrestin, beta 1##AK289718|ARRB1|408|arrestin, beta 1##BC003636|ARRB1|408|arrestin, beta 1##NM_004041|ARRB1|408|arrestin, beta 1##NM_020251|ARRB1|408|arrestin, beta 1##NM_001195528|LOC100507050|100507050|uncharacterized LOC100507050##HQ258227|KLHL35|283212|kelch-like 35 (Drosophila)##BC132708|KLHL35|283212|kelch-like 35 (Drosophila)##BC132710|KLHL35|283212|kelch-like 35 (Drosophila)##AK091109|KLHL35|283212|kelch-like 35 (Drosophila)##BC042952|KLHL35|283212|kelch-like 35 (Drosophila)##BC057763|KLHL35|283212|kelch-like 35 (Drosophila)##NM_001039548|KLHL35|283212|kelch-like 35 (Drosophila)	0.993109	CTCF.p2:14:0.993
chr1	181483604	181483784	reg1038148.p2	3.589	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-30994	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-425829	+	NM_016545	-426057	+	BC137223 BC137224 AK128654 NM_001009992	547103	-	TSC_hg19_v1_chr1_-_182354649 AK301600	870988	-	TSC_hg19_v1_chr1_-_182357758 BC127883	874069	-	NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase	0.014273	
chr1	36698345	36698421	reg1043127.p2	3.589	+	TSC_hg19_v1_chr1_+_36690047 BC065519 BC010997 AF117756 BC002501 BC019076 BC112330 BC112350	-8321	+	TSC_hg19_v1_chr1_+_36690029 NM_005119	-8369	+	TSC_hg19_v1_chr1_+_36636693 AF218002 BC111428	-61607	+	EU446755 TSC_hg19_v1_chr1_+_36748231	49817	+	TSC_hg19_v1_chr1_+_36771968 NM_001162530	73594	+	TSC_hg19_v1_chr1_+_36772696 NM_024676 AK297015 AK056459	74323	+	BC065519|THRAP3|9967|thyroid hormone receptor associated protein 3##BC010997|THRAP3|9967|thyroid hormone receptor associated protein 3##AF117756|THRAP3|9967|thyroid hormone receptor associated protein 3##BC002501|THRAP3|9967|thyroid hormone receptor associated protein 3##BC019076|THRAP3|9967|thyroid hormone receptor associated protein 3##BC112330|THRAP3|9967|thyroid hormone receptor associated protein 3##BC112350|THRAP3|9967|thyroid hormone receptor associated protein 3##NM_005119|THRAP3|9967|thyroid hormone receptor associated protein 3##AF218002|MAP7D1|55700|MAP7 domain containing 1##BC111428|MAP7D1|55700|MAP7 domain containing 1##EU446755|THRAP3|9967|thyroid hormone receptor associated protein 3##NM_001162530|SH3D21|79729|SH3 domain containing 21##NM_024676|SH3D21|79729|SH3 domain containing 21##AK297015|SH3D21|79729|SH3 domain containing 21##AK056459|SH3D21|79729|SH3 domain containing 21	0.0	
chr20	1825463	1825553	reg1034368.p1	3.589	+	AY748247 AY748248 CU687894 BC064532 BC020629 AK292745 NM_001039508 NM_018556 NM_080816	-187117	-	AB590891 CU692960 BC131747 Y10376 BC025286 BC075835 TSC_hg19_v1_chr20_-_1600656 AK289866 AK313517 BX537992 NM_001083910 NM_001135844 NM_006065	-224870	-	DQ891297 EU176577 BC033502 NM_178460	-287186	-	TSC_hg19_v1_chr20_+_1874780 NM_001040022	49288	+	TSC_hg19_v1_chr20_+_1874954 BC075849 AK290776	49481	+	TSC_hg19_v1_chr20_+_1875136 AK298243	49626	+	AY748247|SIRPG|55423|signal-regulatory protein gamma##AY748248|SIRPG|55423|signal-regulatory protein gamma##BC064532|SIRPG|55423|signal-regulatory protein gamma##BC020629|SIRPG|55423|signal-regulatory protein gamma##AK292745|SIRPG|55423|signal-regulatory protein gamma##NM_001039508|SIRPG|55423|signal-regulatory protein gamma##NM_018556|SIRPG|55423|signal-regulatory protein gamma##NM_080816|SIRPG|55423|signal-regulatory protein gamma##BC131747|SIRPB1|10326|signal-regulatory protein beta 1##Y10376|SIRPB1|10326|signal-regulatory protein beta 1##BC025286|SIRPB1|10326|signal-regulatory protein beta 1##BC075835|SIRPB1|10326|signal-regulatory protein beta 1##AK289866|SIRPB1|10326|signal-regulatory protein beta 1##BX537992|SIRPB1|10326|signal-regulatory protein beta 1##NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1##NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1##NM_006065|SIRPB1|10326|signal-regulatory protein beta 1##DQ891297|SIRPD|128646|signal-regulatory protein delta##EU176577|SIRPD|128646|signal-regulatory protein delta##BC033502|SIRPD|128646|signal-regulatory protein delta##NM_178460|SIRPD|128646|signal-regulatory protein delta##NM_001040022|SIRPA|140885|signal-regulatory protein alpha##BC075849|SIRPA|140885|signal-regulatory protein alpha##AK290776|SIRPA|140885|signal-regulatory protein alpha##AK298243|SIRPA|140885|signal-regulatory protein alpha	0.0	
chr20	52489541	52489653	reg1028037.p2	3.589	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-278798	-	AF041259 NM_006526	-289962	-	AK302570 NM_001193421	-687776	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	197465	-	AK315220 NM_003657	197706	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	300923	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.852583	CTCF.p2:28:0.853
chr20	56228332	56228412	reg1024837.p1	3.589	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	-32834	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	-92215	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	-128171	-	TSC_hg19_v1_chr20_-_56285017 AF305616 AX775889 NM_020182	56617	-	TSC_hg19_v1_chr20_+_56285236 AK056098	56853	+	TSC_hg19_v1_chr20_-_56285634 BC080635 AF224278 AY128643 NM_199169 NM_199170 AX775887 AK296199	57250	-	BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF305616|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_020182|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##BC080635|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AF224278|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AY128643|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199169|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##NM_199170|PMEPA1|56937|prostate transmembrane protein, androgen induced 1##AK296199|PMEPA1|56937|prostate transmembrane protein, androgen induced 1	0.912191	CTCF.p2:-14:0.912
chr2	15172035	15172186	reg1032919.p1	3.589	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	-399259	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	-399289	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-2313713	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	529319	-	TSC_hg19_v1_chr2_-_15701451 BC108693 AF388385 BC131735 NM_015909 AB621813	529348	-	NM_004939 X70649	559659	+	AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence##BC108693|NBAS|51594|neuroblastoma amplified sequence##AF388385|NBAS|51594|neuroblastoma amplified sequence##BC131735|NBAS|51594|neuroblastoma amplified sequence##NM_015909|NBAS|51594|neuroblastoma amplified sequence##AB621813|NBAS|51594|neuroblastoma amplified sequence##NM_004939|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1##X70649|DDX1|1653|DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	0.018465	
chr2	207307579	207307681	reg1034876.p1	3.589	+	TSC_hg19_v1_chr2_+_207139414 AK127271 NM_020923	-168163	+	AK312917 BC067833 AK290976 NM_001098199 NM_005279	-224932	-	TSC_hg19_v1_chr2_+_207024617 AK291910 AK310096 D28350 BC067787 BC029316 BC004931 AB529032 CU688340 BT007079 CR456825	-282972	+	TSC_hg19_v1_chr2_+_207308286 AB009672 NM_003812 BC132763 BC132765	703	+	AK129906 TSC_hg19_v1_chr2_+_207406857	99206	+	NM_001102659	199511	+	AK127271|ZDBF2|57683|zinc finger, DBF-type containing 2##NM_020923|ZDBF2|57683|zinc finger, DBF-type containing 2##AK312917|GPR1|2825|G protein-coupled receptor 1##BC067833|GPR1|2825|G protein-coupled receptor 1##AK290976|GPR1|2825|G protein-coupled receptor 1##NM_001098199|GPR1|2825|G protein-coupled receptor 1##NM_005279|GPR1|2825|G protein-coupled receptor 1##AK291910|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##AK310096|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##D28350|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC067787|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC029316|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BC004931|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##BT007079|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##CR456825|EEF1B2|1933|eukaryotic translation elongation factor 1 beta 2##AB009672|ADAM23|8745|ADAM metallopeptidase domain 23##NM_003812|ADAM23|8745|ADAM metallopeptidase domain 23##BC132763|ADAM23|8745|ADAM metallopeptidase domain 23##BC132765|ADAM23|8745|ADAM metallopeptidase domain 23##AK129906|ADAM23|8745|ADAM metallopeptidase domain 23##NM_001102659|LOC200726|200726|hCG1657980	0.192323	
chr3	196159526	196159652	reg1039034.p1	3.589	+	TSC_hg19_v1_chr3_-_196159304 NM_015562	-256	-	TSC_hg19_v1_chr3_-_196159299 AK026451 AK129880 AK303630 AK308699 AK307899	-290	-	AB018337 TSC_hg19_v1_chr3_-_196159295 BC047420	-306	-	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	70989	-	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	82624	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	135801	-	NM_015562|UBXN7|26043|UBX domain protein 7##AK026451|UBXN7|26043|UBX domain protein 7##AK129880|UBXN7|26043|UBX domain protein 7##AK303630|UBXN7|26043|UBX domain protein 7##AK308699|UBXN7|26043|UBX domain protein 7##AK307899|UBXN7|26043|UBX domain protein 7##AB018337|UBXN7|26043|UBX domain protein 7##BC047420|UBXN7|26043|UBX domain protein 7##BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53	0.0	
chr4	8430141	8430256	reg1036693.p1	3.589	+	TSC_hg19_v1_chr4_+_8271480 NM_053044 AY040094 BC034390 BC035717 AY280665 AY280666 AB528940 DQ891188 DQ894371	-158623	+	TSC_hg19_v1_chr4_+_8201038 BC030283 AK074093 NM_018986 BC068094 AK074402 AK126165 BC131785	-229166	+	DQ413176 AJ748600 AJ748601 TSC_hg19_v1_chr4_-_8160541 BC122567 AK130044 AK094754 BC067214 NM_001130083 NM_001130084 NM_001130085 NM_001130086 NM_001130087 NM_001130088 NM_032432	-269664	-	TSC_hg19_v1_chr4_-_8430196 AK313242	3	-	Y11411 BC017053 TSC_hg19_v1_chr4_-_8442447 AK225080 NM_001101667 NM_003501	12258	-	TSC_hg19_v1_chr4_+_8442503 NM_152544	12316	+	NM_053044|HTRA3|94031|HtrA serine peptidase 3##AY040094|HTRA3|94031|HtrA serine peptidase 3##BC034390|HTRA3|94031|HtrA serine peptidase 3##BC035717|HTRA3|94031|HtrA serine peptidase 3##AY280665|HTRA3|94031|HtrA serine peptidase 3##AY280666|HTRA3|94031|HtrA serine peptidase 3##DQ891188|HTRA3|94031|HtrA serine peptidase 3##DQ894371|HTRA3|94031|HtrA serine peptidase 3##BC030283|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074093|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##NM_018986|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC068094|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074402|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK126165|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC131785|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##DQ413176|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748600|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748601|ABLIM2|84448|actin binding LIM protein family, member 2##BC122567|ABLIM2|84448|actin binding LIM protein family, member 2##AK130044|ABLIM2|84448|actin binding LIM protein family, member 2##AK094754|ABLIM2|84448|actin binding LIM protein family, member 2##BC067214|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130083|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130084|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130085|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130086|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130087|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130088|ABLIM2|84448|actin binding LIM protein family, member 2##NM_032432|ABLIM2|84448|actin binding LIM protein family, member 2##AK313242|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##Y11411|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##BC017053|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK225080|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_001101667|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_003501|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_152544|METTL19|152992|methyltransferase like 19	0.0	
chr6	13473653	13473743	reg1041095.p1	3.589	+	AK027010 NM_001242630	-65330	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	-144998	-	AK091836 AX747210 NM_001242698	-177881	-	AK055131 AF264036 NM_001242628	12700	-	TSC_hg19_v1_chr6_-_13487051 BC148295 BC119005 BC124557	13399	-	TSC_hg19_v1_chr6_-_13487810 AK000337 NM_001242629 NM_018988	14160	-	AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AK055131|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF264036|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242628|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC148295|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC119005|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC124557|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AK000337|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242629|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_018988|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr7	91677848	91677929	reg1037839.p2	3.589	+	TSC_hg19_v1_chr7_+_91570181 NM_005751 NM_147185 AJ131693 AF026245 BC015533 AB019691 AY803272 CU677341	-107607	+	TSC_hg19_v1_chr7_-_91509979 BC108648 AL832861 AK298469 AK313641 NM_006980 Y09615 AK222730 AK311568	-167873	-	TSC_hg19_v1_chr7_+_90893747 AB017363 NM_003505 AF072872 BC051271 AK314996	-784012	+	AB590319 CU689330 DQ891311 DQ894495 TSC_hg19_v1_chr7_-_91763765 D55653 BC018429	85834	-	TSC_hg19_v1_chr7_-_91763792 AK314205 BC032322 U23942	85913	-	TSC_hg19_v1_chr7_-_91763829 NM_000786	85959	-	NM_005751|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##NM_147185|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AJ131693|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AF026245|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##BC015533|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##AB019691|AKAP9|10142|A kinase (PRKA) anchor protein (yotiao) 9##BC108648|MTERF|7978|mitochondrial transcription termination factor##AL832861|MTERF|7978|mitochondrial transcription termination factor##AK298469|MTERF|7978|mitochondrial transcription termination factor##AK313641|MTERF|7978|mitochondrial transcription termination factor##NM_006980|MTERF|7978|mitochondrial transcription termination factor##Y09615|MTERF|7978|mitochondrial transcription termination factor##AK222730|MTERF|7978|mitochondrial transcription termination factor##AB017363|FZD1|8321|frizzled family receptor 1##NM_003505|FZD1|8321|frizzled family receptor 1##AF072872|FZD1|8321|frizzled family receptor 1##BC051271|FZD1|8321|frizzled family receptor 1##AK314996|FZD1|8321|frizzled family receptor 1##DQ891311|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##DQ894495|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##D55653|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##BC018429|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##AK314205|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##BC032322|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##U23942|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1##NM_000786|CYP51A1|1595|cytochrome P450, family 51, subfamily A, polypeptide 1	0.134641	
chr10	112262507	112262573	reg1018600.p1	3.588	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-4789	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-197840	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-197947	-	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	64952	+	AF067163 TSC_hg19_v1_chr10_+_112344155	81575	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	141589	+	NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20	0.0	
chr11	123252567	123252658	reg1034992.p1	3.588	+	AK026068 NM_024769 TSC_hg19_v1_chr11_-_123066023	-186607	-	AY326422 AY358340 TSC_hg19_v1_chr11_-_123065957 AK304843	-186710	-	TSC_hg19_v1_chr11_-_122932848 NM_006597 NM_153201 AK310467	-319733	-	TSC_hg19_v1_chr11_+_123396366 AK127457	143743	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	143892	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	178361	+	AK026068|CLMP|79827|CXADR-like membrane protein##NM_024769|CLMP|79827|CXADR-like membrane protein##AY326422|CLMP|79827|CXADR-like membrane protein##AY358340|CLMP|79827|CXADR-like membrane protein##AK304843|CLMP|79827|CXADR-like membrane protein##NM_006597|HSPA8|3312|heat shock 70kDa protein 8##NM_153201|HSPA8|3312|heat shock 70kDa protein 8##AK310467|HSPA8|3312|heat shock 70kDa protein 8##AK127457|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B	0.0	
chr12	109490300	109490399	reg1033960.p2	3.588	+	BC033587 NM_018711 TSC_hg19_v1_chr12_-_109458878	-31488	-	NM_001917 AX741655 AX741656 AX741658 AX776478 AX776479 AX786386 AK312995 BX538210 BC029057 BC074770	-216429	+	TSC_hg19_v1_chr12_-_109251360 BC062341 NM_001161330 NM_018984	-238927	-	TSC_hg19_v1_chr12_+_109490413 NM_032663 BC004868 AJ586136 CU678780 DQ893401 DQ896783	75	+	BC070489 TSC_hg19_v1_chr12_-_109531278 AY754389 AK309062 NM_001001655 NM_001145374 NM_001145375 NM_001205179 NM_001205180	40932	-	TSC_hg19_v1_chr12_+_109535398 NM_080911 AK313552 Y09008	45060	+	BC033587|SVOP|55530|SV2 related protein homolog (rat)##NM_018711|SVOP|55530|SV2 related protein homolog (rat)##NM_001917|DAO|1610|D-amino-acid oxidase##AX741655|DAO|1610|D-amino-acid oxidase##AX741656|DAO|1610|D-amino-acid oxidase##AX741658|DAO|1610|D-amino-acid oxidase##AX776478|DAO|1610|D-amino-acid oxidase##AX776479|DAO|1610|D-amino-acid oxidase##AX786386|DAO|1610|D-amino-acid oxidase##AK312995|DAO|1610|D-amino-acid oxidase##BX538210|DAO|1610|D-amino-acid oxidase##BC029057|DAO|1610|D-amino-acid oxidase##BC074770|DAO|1610|D-amino-acid oxidase##BC062341|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161330|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_018984|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_032663|USP30|84749|ubiquitin specific peptidase 30##BC004868|USP30|84749|ubiquitin specific peptidase 30##AJ586136|USP30|84749|ubiquitin specific peptidase 30##DQ893401|USP30|84749|ubiquitin specific peptidase 30##DQ896783|USP30|84749|ubiquitin specific peptidase 30##BC070489|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##AY754389|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##AK309062|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001001655|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001145374|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001145375|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001205179|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_001205180|ALKBH2|121642|alkB, alkylation repair homolog 2 (E. coli)##NM_080911|UNG|7374|uracil-DNA glycosylase##AK313552|UNG|7374|uracil-DNA glycosylase##Y09008|UNG|7374|uracil-DNA glycosylase	0.0	
chr1	45987489	45987599	reg1035598.p2	3.588	+	AK098537 NM_015506 TSC_hg19_v1_chr1_+_45965990 AL080062 BC006122	-21605	+	TSC_hg19_v1_chr1_-_45956836 BX648441 AK027573 AK294172 BC022194 AB057597 AJ132545 AK299269 NM_007170 AK302494	-30711	-	TSC_hg19_v1_chr1_+_45805883 AK298162 AK093320 BC009364 CU679325 CR457320	-181644	+	X67951 L19184 TSC_hg19_v1_chr1_-_45987557 AK311898 BC007063 AK131049 BC021683 NM_002574 NM_181696 NM_181697	34	-	NM_001202431	1017	-	NM_001202413 NM_001202414 NM_006066 NM_153326 TSC_hg19_v1_chr1_+_46016497 AK311175 AK307068	28944	+	AK098537|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##NM_015506|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##AL080062|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BC006122|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BX648441|TESK2|10420|testis-specific kinase 2##AK027573|TESK2|10420|testis-specific kinase 2##AK294172|TESK2|10420|testis-specific kinase 2##BC022194|TESK2|10420|testis-specific kinase 2##AB057597|TESK2|10420|testis-specific kinase 2##AJ132545|TESK2|10420|testis-specific kinase 2##AK299269|TESK2|10420|testis-specific kinase 2##NM_007170|TESK2|10420|testis-specific kinase 2##AK302494|TESK2|10420|testis-specific kinase 2##AK298162|TOE1|114034|target of EGR1, member 1 (nuclear)##AK093320|TOE1|114034|target of EGR1, member 1 (nuclear)##BC009364|TOE1|114034|target of EGR1, member 1 (nuclear)##CR457320|TOE1|114034|target of EGR1, member 1 (nuclear)##X67951|PRDX1|5052|peroxiredoxin 1##L19184|PRDX1|5052|peroxiredoxin 1##AK311898|PRDX1|5052|peroxiredoxin 1##BC007063|PRDX1|5052|peroxiredoxin 1##AK131049|PRDX1|5052|peroxiredoxin 1##BC021683|PRDX1|5052|peroxiredoxin 1##NM_002574|PRDX1|5052|peroxiredoxin 1##NM_181696|PRDX1|5052|peroxiredoxin 1##NM_181697|PRDX1|5052|peroxiredoxin 1##NM_001202431|PRDX1|5052|peroxiredoxin 1##NM_001202413|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_001202414|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_006066|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_153326|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307068|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	0.0	
chr15	34029878	34030031	reg1019452.p1	3.588	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	-426785	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-669719	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-1018788	-	TSC_hg19_v1_chr15_-_34212524 BC037796	182604	-	AK095198 NM_012125	231134	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	301358	-	AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor	0.0	
chr15	79297066	79297240	reg1025941.p2	3.588	+	TSC_hg19_v1_chr15_-_79237389 AL110099 BC002479 BC018821 AK309491 AK314698 D28436 AK130158 NM_004390	-59754	-	TSC_hg19_v1_chr15_-_79237350 AF426247 AF426248 CR456881 CU677980 DQ890683 DQ893772 AK295583 X16832	-59818	-	TSC_hg19_v1_chr15_+_79165343 AK300789 BC067826 AB385578 CU692730 DQ892602 DQ895837 AK310181	-131790	+	NM_153815 S62035	848	-	L26584 CU691844 AB385192 TSC_hg19_v1_chr15_-_79382954	85746	-	AK290135 TSC_hg19_v1_chr15_-_79383114 BC040275 NM_001145648 NM_002891	85995	-	AL110099|CTSH|1512|cathepsin H##BC002479|CTSH|1512|cathepsin H##BC018821|CTSH|1512|cathepsin H##AK309491|CTSH|1512|cathepsin H##AK314698|CTSH|1512|cathepsin H##D28436|CTSH|1512|cathepsin H##AK130158|CTSH|1512|cathepsin H##NM_004390|CTSH|1512|cathepsin H##AF426247|CTSH|1512|cathepsin H##AF426248|CTSH|1512|cathepsin H##CR456881|CTSH|1512|cathepsin H##DQ890683|CTSH|1512|cathepsin H##DQ893772|CTSH|1512|cathepsin H##X16832|CTSH|1512|cathepsin H##AK300789|MORF4L1|10933|mortality factor 4 like 1##BC067826|MORF4L1|10933|mortality factor 4 like 1##DQ892602|MORF4L1|10933|mortality factor 4 like 1##DQ895837|MORF4L1|10933|mortality factor 4 like 1##AK310181|MORF4L1|10933|mortality factor 4 like 1##NM_153815|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##S62035|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##L26584|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##AK290135|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##BC040275|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_001145648|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1##NM_002891|RASGRF1|5923|Ras protein-specific guanine nucleotide-releasing factor 1	0.0	
chr17	73514429	73514496	reg1035724.p2	3.588	+	TSC_hg19_v1_chr17_+_73512608 NM_207346 AK094466 BC045551 BC053643 BC047793 CU690512	-1848	+	BC066643 NM_020753 TSC_hg19_v1_chr17_-_73511632	-2823	-	TSC_hg19_v1_chr17_-_73511556 AF451976 BC032359	-2927	-	TSC_hg19_v1_chr17_+_73521798 NM_001015002 NM_001031803 NM_004524 BC010879 BC006503 X87342 BC067840 BC064994 BC080595	7334	+	TSC_hg19_v1_chr17_+_73553885 AK126687	39423	+	AF418286 AF418287 AF418288 AF418289 AF418290 AF418291 TSC_hg19_v1_chr17_+_73584199	69713	+	NM_207346|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##AK094466|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC045551|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC053643|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC047793|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC066643|CASKIN2|57513|CASK interacting protein 2##NM_020753|CASKIN2|57513|CASK interacting protein 2##AF451976|CASKIN2|57513|CASK interacting protein 2##BC032359|CASKIN2|57513|CASK interacting protein 2##NM_001015002|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_001031803|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_004524|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC010879|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC006503|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##X87342|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC067840|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC064994|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##AK126687|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##AF418286|MYO15B|80022|myosin XVB pseudogene##AF418287|MYO15B|80022|myosin XVB pseudogene##AF418288|MYO15B|80022|myosin XVB pseudogene##AF418289|MYO15B|80022|myosin XVB pseudogene##AF418290|MYO15B|80022|myosin XVB pseudogene##AF418291|MYO15B|80022|myosin XVB pseudogene	0.0	
chr2	191543345	191543474	reg1033031.p1	3.588	+	TSC_hg19_v1_chr2_+_191513840 NM_005966 BC035724 AK292446	-29443	+	TSC_hg19_v1_chr2_-_191399454 NM_001142645	-143943	-	AK296987 TSC_hg19_v1_chr2_-_191399436	-143982	-	AK289747 NM_014905 TSC_hg19_v1_chr2_+_191745546	202137	+	TSC_hg19_v1_chr2_+_191745547 BC038507 AB020645 AF158555	202148	+	TSC_hg19_v1_chr2_+_191745568 AF097495 Y08264 AF327434	202175	+	NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##NM_001142645|TMEM194B|100131211|transmembrane protein 194B##AK296987|TMEM194B|100131211|transmembrane protein 194B##AK289747|GLS|2744|glutaminase##NM_014905|GLS|2744|glutaminase##BC038507|GLS|2744|glutaminase##AB020645|GLS|2744|glutaminase##AF158555|GLS|2744|glutaminase##AF097495|GLS|2744|glutaminase##Y08264|GLS|2744|glutaminase##AF327434|GLS|2744|glutaminase	0.0	
chr3	14466442	14466570	reg1036090.p2	3.588	+	TSC_hg19_v1_chr3_+_14444105 NM_001134367 NM_001134368 NM_003043 AK308417 BC111489 AK307284 AK309534 BC137128 BC137129 BC144490 BC006252 AB209172	-22390	+	TSC_hg19_v1_chr3_+_14444072 AK303649	-22437	+	TSC_hg19_v1_chr3_+_14220355 AJ238095 AB463841 CR457185	-246155	+	NM_001080423	117081	-	TSC_hg19_v1_chr3_+_14693268 NM_016474 AK091158 AX746816 BC005199 BC033897 BC013999	226752	+	AK309525 TSC_hg19_v1_chr3_+_14693279 AF151046	226777	+	NM_001134367|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_001134368|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##NM_003043|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK308417|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC111489|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK307284|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK309534|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137128|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC137129|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC144490|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##BC006252|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AB209172|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AK303649|SLC6A6|6533|solute carrier family 6 (neurotransmitter transporter, taurine), member 6##AJ238095|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##CR457185|LSM3|27258|LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001080423|GRIP2|80852|glutamate receptor interacting protein 2##NM_016474|C3orf19|51244|chromosome 3 open reading frame 19##AK091158|C3orf19|51244|chromosome 3 open reading frame 19##BC005199|C3orf19|51244|chromosome 3 open reading frame 19##BC033897|C3orf19|51244|chromosome 3 open reading frame 19##BC013999|C3orf19|51244|chromosome 3 open reading frame 19##AK309525|C3orf19|51244|chromosome 3 open reading frame 19##AF151046|C3orf19|51244|chromosome 3 open reading frame 19	0.0	
chr4	143906523	143906597	reg1029911.p1	3.588	+	NM_001101669 NM_003866	-138957	-	AK290619 NM_000585 NM_172175 BC018149 U14407	-1348794	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-1764474	+	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	199504	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	199565	+	NM_002039 NM_207123 AK289767 BC064848	351455	+	NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38##NM_002039|GAB1|2549|GRB2-associated binding protein 1##NM_207123|GAB1|2549|GRB2-associated binding protein 1##AK289767|GAB1|2549|GRB2-associated binding protein 1##BC064848|GAB1|2549|GRB2-associated binding protein 1	0.666768	CTCF.p2:-9:0.667
chr5	10522522	10522669	reg1036653.p2	3.588	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	-80443	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	-80592	+	TSC_hg19_v1_chr5_+_10354003 AB385356	-168587	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	41847	+	CR542184 AB590487 AK311783 TSC_hg19_v1_chr5_-_10761335 X76105 AK298670	238664	-	TSC_hg19_v1_chr5_-_10761341 BC002726	238747	-	AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B##CR542184|DAP|1611|death-associated protein##AK311783|DAP|1611|death-associated protein##X76105|DAP|1611|death-associated protein##AK298670|DAP|1611|death-associated protein##BC002726|DAP|1611|death-associated protein	0.0	
chr5	153882581	153882722	reg1034587.p2	3.588	+	TSC_hg19_v1_chr5_-_153857823 AF061756 NM_004821	-24829	-	TSC_hg19_v1_chr5_-_153857790 BC021190	-24863	-	TSC_hg19_v1_chr5_+_153825568 AY341060 BC009829	-57041	+	BC001460 NM_015315 CU674716	209822	+	TSC_hg19_v1_chr5_+_154134891 AB018274	252244	+	TSC_hg19_v1_chr5_+_154135038 AK091465 AX747001	252430	+	AF061756|HAND1|9421|heart and neural crest derivatives expressed 1##NM_004821|HAND1|9421|heart and neural crest derivatives expressed 1##BC021190|HAND1|9421|heart and neural crest derivatives expressed 1##AY341060|SAP30L|79685|SAP30-like##BC009829|SAP30L|79685|SAP30-like##BC001460|LARP1|23367|La ribonucleoprotein domain family, member 1##NM_015315|LARP1|23367|La ribonucleoprotein domain family, member 1##AB018274|LARP1|23367|La ribonucleoprotein domain family, member 1##AK091465|LARP1|23367|La ribonucleoprotein domain family, member 1	0.265978	
chr5	180700503	180700625	reg1037474.p2	3.588	+	TSC_hg19_v1_chr5_+_180688213 BC016291	-12337	+	AK054802 TSC_hg19_v1_chr5_-_180688115 BC007372 NM_032765 AB209243	-12439	-	BC014256 TSC_hg19_v1_chr5_-_180670905 BC010119 BC019093 BC032006 BC035460 BC019362 BC014788 BC000366 M24194 BC021993 AK095666 AK301468 D28398 AK310916 AK222488 NM_006098 AK303316 BC000214	-29661	-	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	93713	+	None	None	None	None	None	None	AK054802|TRIM52|84851|tripartite motif containing 52##BC007372|TRIM52|84851|tripartite motif containing 52##NM_032765|TRIM52|84851|tripartite motif containing 52##AB209243|TRIM52|84851|tripartite motif containing 52##BC014256|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC010119|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC019093|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC032006|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC035460|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC019362|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC014788|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC000366|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##M24194|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC021993|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK095666|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK301468|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##D28398|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK310916|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK222488|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##NM_006098|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK303316|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC000214|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16	0.185308	
chr6_cox_hap2	1963652	1963719	reg1033852.p1	3.588	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.076566	
chr9	36765894	36766052	reg1032714.p2	3.588	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-193049	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-364798	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-365076	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	268443	-	TSC_hg19_v1_chr9_+_37079908 AK091718	313933	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	314035	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.0	
chr9	98224625	98224806	reg1022044.p1	3.588	+	AK312548 AK222871 TSC_hg19_v1_chr9_-_98079974 BC015748 X66893 AK304887 NM_000136 NM_001243744	-144784	-	X66894 NM_001243743	-145195	-	AK298959 TSC_hg19_v1_chr9_+_97766501 AK300486	-458240	+	TSC_hg19_v1_chr9_-_98268874 AB209495 AB233423 AB233424 CU692174	44158	-	AB189440 NM_001083607	44765	-	TSC_hg19_v1_chr9_-_98269686 NM_001083606 U43148	44985	-	AK312548|FANCC|2176|Fanconi anemia, complementation group C##AK222871|FANCC|2176|Fanconi anemia, complementation group C##BC015748|FANCC|2176|Fanconi anemia, complementation group C##X66893|FANCC|2176|Fanconi anemia, complementation group C##AK304887|FANCC|2176|Fanconi anemia, complementation group C##NM_000136|FANCC|2176|Fanconi anemia, complementation group C##NM_001243744|FANCC|2176|Fanconi anemia, complementation group C##X66894|FANCC|2176|Fanconi anemia, complementation group C##NM_001243743|FANCC|2176|Fanconi anemia, complementation group C##AK298959|C9orf3|84909|chromosome 9 open reading frame 3##AK300486|C9orf3|84909|chromosome 9 open reading frame 3##AB209495|PTCH1|5727|patched 1##AB233423|PTCH1|5727|patched 1##AB233424|PTCH1|5727|patched 1##AB189440|PTCH1|5727|patched 1##NM_001083607|PTCH1|5727|patched 1##NM_001083606|PTCH1|5727|patched 1##U43148|PTCH1|5727|patched 1	0.0	
chr1	28559528	28559643	reg1030359.p2	3.587	+	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	-54	-	S52624 AK292053 NM_001164721 NM_001164722	-39173	-	NM_000952 NM_001164723	-56131	-	TSC_hg19_v1_chr1_+_28562634 NM_016311 NM_178190 NM_178191 AK316600 BC009677 AK000934 AB029042 BT009849 CR457097 EU832478 EU832558 BC017562 BC004955	3064	+	TSC_hg19_v1_chr1_+_28586034 NM_031459 BC013304 AY123223 BC033719 AL136551 AK315710 DQ892827 DQ896073 EU831582 EU831667 AB529110 CU680558	26573	+	NM_001127350 NM_017638 AK296130 AK000052 AB107222 BC002694 TSC_hg19_v1_chr1_+_28655576	95962	+	BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##NM_016311|ATPIF1|93974|ATPase inhibitory factor 1##NM_178190|ATPIF1|93974|ATPase inhibitory factor 1##NM_178191|ATPIF1|93974|ATPase inhibitory factor 1##AK316600|ATPIF1|93974|ATPase inhibitory factor 1##BC009677|ATPIF1|93974|ATPase inhibitory factor 1##AK000934|ATPIF1|93974|ATPase inhibitory factor 1##AB029042|ATPIF1|93974|ATPase inhibitory factor 1##BT009849|ATPIF1|93974|ATPase inhibitory factor 1##CR457097|ATPIF1|93974|ATPase inhibitory factor 1##EU832478|ATPIF1|93974|ATPase inhibitory factor 1##EU832558|ATPIF1|93974|ATPase inhibitory factor 1##BC017562|ATPIF1|93974|ATPase inhibitory factor 1##BC004955|ATPIF1|93974|ATPase inhibitory factor 1##NM_031459|SESN2|83667|sestrin 2##BC013304|SESN2|83667|sestrin 2##AY123223|SESN2|83667|sestrin 2##BC033719|SESN2|83667|sestrin 2##AL136551|SESN2|83667|sestrin 2##AK315710|SESN2|83667|sestrin 2##DQ892827|SESN2|83667|sestrin 2##DQ896073|SESN2|83667|sestrin 2##EU831582|SESN2|83667|sestrin 2##EU831667|SESN2|83667|sestrin 2##NM_001127350|MED18|54797|mediator complex subunit 18##NM_017638|MED18|54797|mediator complex subunit 18##AK296130|MED18|54797|mediator complex subunit 18##AK000052|MED18|54797|mediator complex subunit 18##AB107222|MED18|54797|mediator complex subunit 18##BC002694|MED18|54797|mediator complex subunit 18	0.0	
chr13	71793276	71793373	reg1039028.p2	3.587	+	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	-1110783	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-3988820	-	AK289924 NM_022843	-9803670	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	646935	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	647439	-	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	648110	-	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)	0.088385	
chr15	22423336	22423475	reg1040633.p2	3.587	+	BC136597 BC136598 NM_001005241 DQ786223	-40960	+	BC136985 NM_001004719	-54928	+	NM_207355 BC066981	-340267	-	DQ524033 DQ454451 TSC_hg19_v1_chr15_-_22473107 DQ454627 AF343362 EU433867 DQ454583 DQ454461 DQ454478 DQ454710 GQ232839 DQ454494 DQ454810 DQ454920 DQ454517 DQ454648 DQ454831 DQ454837 DQ454839 DQ454830 EF091921 EU350427 GQ232820 GQ232886 DQ454775 EU099074 EU099080 EU099197 DQ454762 AM279532 S79246 FJ385352 FJ385386 FJ385412 U86668 S73132 DQ454486 DQ454484 DQ523962 DQ523967 DQ524021 DQ524117 DQ524132 DQ524138 HM996399 DQ926110 HM995525 AB363221 AJ132847 AJ300792 AY686939 AY941876 AY941978 HM995325 HM995448 HM995452 HM995524 HM995543 HM995544 HM995546 HM995547 HM995794 HM995826 AB063656 AB063670 AB363087 AF062233 AJ244946 AJ245002 AJ245015 AJ245026 AJ245030 AJ279514 AJ279520 AJ279522 AJ579204 AY670752 AY670765 AY670783 AY671055 AY671074 AY671080 AY671081 AY671306 AY671333 AY671362 AY671391 AY671498 AY671678 AY671740 AY671743 AY671757 AY941972 AY941973 AY941975 AY941977 AY941979 DQ431529 DQ431542 HQ689717 U00532 U96389 Z46285 AY686870 AY686907 AY686931 AY944698 AY944714 AY944717 DQ535422 EF178066 EF178072 AY671309 X54445 AY671174 AY671312 AF062120 AF062232 X65905 X65906 X65908 X65909 X65910 Z75399	49817	-	AK097517 NM_001001413	312840	+	NM_001102610 NM_052903 TSC_hg19_v1_chr15_+_22833498 BC039271 AF272884 AB067486 AK056416 AK289859 AK310897 BC071560	410065	+	BC136597|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136598|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##NM_001005241|OR4N4|283694|olfactory receptor, family 4, subfamily N, member 4##BC136985|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_001004719|OR4M2|390538|olfactory receptor, family 4, subfamily M, member 2##NM_207355|POTEB|339010|POTE ankyrin domain family, member B##BC066981|POTEB|339010|POTE ankyrin domain family, member B##AK097517|GOLGA6L1|283767|golgin A6 family-like 1##NM_001001413|GOLGA6L1|283767|golgin A6 family-like 1##NM_001102610|TUBGCP5|114791|tubulin, gamma complex associated protein 5##NM_052903|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC039271|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AF272884|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AB067486|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK056416|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK289859|TUBGCP5|114791|tubulin, gamma complex associated protein 5##AK310897|TUBGCP5|114791|tubulin, gamma complex associated protein 5##BC071560|TUBGCP5|114791|tubulin, gamma complex associated protein 5	0.177489	
chr17	27065291	27065390	reg1039010.p1	3.587	+	BC112240 BC113705 AK301429 AY242354 AY267371 HQ258347 NM_178170	-9526	+	NM_001160407	-11392	-	EU831756 EU831834 TSC_hg19_v1_chr17_-_27053250 BC014072 NM_138463	-12152	-	TSC_hg19_v1_chr17_+_27071025 NM_004295 BC001769 X80200 AK300804 AY937222 AY937223 AY937224 AY937225 AB529167 DQ892825 DQ896071 CU674876 AF082185	5729	+	TSC_hg19_v1_chr17_-_27139467 AK095569	74107	-	BC021228 TSC_hg19_v1_chr17_-_27169811 BX647766 AK299477 AK001562 AK057665 NM_001077498 NM_018182	104450	-	BC112240|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##BC113705|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AK301429|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY242354|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY267371|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##HQ258347|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_178170|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_001160407|TLCD1|116238|TLC domain containing 1##EU831756|TLCD1|116238|TLC domain containing 1##EU831834|TLCD1|116238|TLC domain containing 1##BC014072|TLCD1|116238|TLC domain containing 1##NM_138463|TLCD1|116238|TLC domain containing 1##NM_004295|TRAF4|9618|TNF receptor-associated factor 4##BC001769|TRAF4|9618|TNF receptor-associated factor 4##X80200|TRAF4|9618|TNF receptor-associated factor 4##AK300804|TRAF4|9618|TNF receptor-associated factor 4##AY937222|TRAF4|9618|TNF receptor-associated factor 4##AY937223|TRAF4|9618|TNF receptor-associated factor 4##AY937224|TRAF4|9618|TNF receptor-associated factor 4##DQ892825|TRAF4|9618|TNF receptor-associated factor 4##DQ896071|TRAF4|9618|TNF receptor-associated factor 4##AF082185|TRAF4|9618|TNF receptor-associated factor 4##AK095569|C17orf63|55731|chromosome 17 open reading frame 63##BC021228|C17orf63|55731|chromosome 17 open reading frame 63##BX647766|C17orf63|55731|chromosome 17 open reading frame 63##AK299477|C17orf63|55731|chromosome 17 open reading frame 63##AK001562|C17orf63|55731|chromosome 17 open reading frame 63##AK057665|C17orf63|55731|chromosome 17 open reading frame 63##NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63##NM_018182|C17orf63|55731|chromosome 17 open reading frame 63	0.0	
chr19	12893292	12893359	reg1044143.p1	3.587	+	TSC_hg19_v1_chr19_-_12886422 NM_001100176 NM_013312	-6898	-	CU680326 DQ891339 DQ893360 DQ894521 DQ896679 AB527820 TSC_hg19_v1_chr19_-_12886342 AF044924 BC012443	-6998	-	AF440756 AY515705 NM_017682 AK000139 AK225232	-29887	+	TSC_hg19_v1_chr19_+_12902286 DQ650707	8965	+	AK222532 TSC_hg19_v1_chr19_+_12902299 AK313737 BC110372 BC004250 BC009465 BC009466 NM_002229 X51345	8988	+	BC000452 BC003022 BC064138 TSC_hg19_v1_chr19_-_12912615 Z22548 AK289485 AK293957 BC039428 AK022395 NM_005809 NM_181738	19339	-	NM_001100176|HOOK2|29911|hook homolog 2 (Drosophila)##NM_013312|HOOK2|29911|hook homolog 2 (Drosophila)##DQ891339|HOOK2|29911|hook homolog 2 (Drosophila)##DQ893360|HOOK2|29911|hook homolog 2 (Drosophila)##DQ894521|HOOK2|29911|hook homolog 2 (Drosophila)##DQ896679|HOOK2|29911|hook homolog 2 (Drosophila)##AF044924|HOOK2|29911|hook homolog 2 (Drosophila)##BC012443|HOOK2|29911|hook homolog 2 (Drosophila)##AF440756|BEST2|54831|bestrophin 2##AY515705|BEST2|54831|bestrophin 2##NM_017682|BEST2|54831|bestrophin 2##AK000139|BEST2|54831|bestrophin 2##AK225232|BEST2|54831|bestrophin 2##AK222532|JUNB|3726|jun B proto-oncogene##AK313737|JUNB|3726|jun B proto-oncogene##BC004250|JUNB|3726|jun B proto-oncogene##BC009465|JUNB|3726|jun B proto-oncogene##BC009466|JUNB|3726|jun B proto-oncogene##NM_002229|JUNB|3726|jun B proto-oncogene##X51345|JUNB|3726|jun B proto-oncogene##BC000452|PRDX2|7001|peroxiredoxin 2##BC003022|PRDX2|7001|peroxiredoxin 2##BC064138|PRDX2|7001|peroxiredoxin 2##Z22548|PRDX2|7001|peroxiredoxin 2##AK289485|PRDX2|7001|peroxiredoxin 2##AK293957|PRDX2|7001|peroxiredoxin 2##BC039428|PRDX2|7001|peroxiredoxin 2##AK022395|PRDX2|7001|peroxiredoxin 2##NM_005809|PRDX2|7001|peroxiredoxin 2##NM_181738|PRDX2|7001|peroxiredoxin 2	0.01764	
chr21	43846004	43846120	reg1029989.p2	3.587	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-22050	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-29901	-	M12075 BC032811 NM_003225 X00474 X52003	-59440	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	70318	-	AJ269529 NM_018964	73679	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	87941	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.0	
chr2	171003430	171003554	reg1041733.p1	3.587	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-319534	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-322107	-	TSC_hg19_v1_chr2_+_170662051 M20328 M35261	-341348	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	31193	+	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	568366	+	TSC_hg19_v1_chr2_+_171571942 AB464708	568485	+	NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##M20328|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##M35261|SSB|6741|Sjogren syndrome antigen B (autoantigen La)##AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor	0.016302	
chr2	219536830	219537011	reg1040794.p2	3.587	+	TSC_hg19_v1_chr2_+_219536837 NM_001243313 NM_015690 AB033104 BC026158	-129	+	AB527514 CU677361 TSC_hg19_v1_chr2_-_219536703 BC015612 AK023968 BC028167 AK222525 AK289501 NM_022453	-184	-	TSC_hg19_v1_chr2_+_219524452 BC000416 BC007500 AF026849 AK096210	-12445	+	TSC_hg19_v1_chr2_+_219575602 AK302728 NM_014640 AK291770 BC021707 AL833511	38673	+	TSC_hg19_v1_chr2_+_219575684 D79995	38787	+	TSC_hg19_v1_chr2_+_219646471 AK226039 NM_000784 BC017044	109554	+	NM_001243313|STK36|27148|serine/threonine kinase 36##NM_015690|STK36|27148|serine/threonine kinase 36##AB033104|STK36|27148|serine/threonine kinase 36##BC026158|STK36|27148|serine/threonine kinase 36##BC015612|RNF25|64320|ring finger protein 25##AK023968|RNF25|64320|ring finger protein 25##BC028167|RNF25|64320|ring finger protein 25##AK222525|RNF25|64320|ring finger protein 25##AK289501|RNF25|64320|ring finger protein 25##NM_022453|RNF25|64320|ring finger protein 25##BC000416|BCS1L|617|BCS1-like (S. cerevisiae)##BC007500|BCS1L|617|BCS1-like (S. cerevisiae)##AF026849|BCS1L|617|BCS1-like (S. cerevisiae)##AK096210|BCS1L|617|BCS1-like (S. cerevisiae)##AK302728|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##NM_014640|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##AK291770|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##BC021707|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##AL833511|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##D79995|TTLL4|9654|tubulin tyrosine ligase-like family, member 4##AK226039|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##NM_000784|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1##BC017044|CYP27A1|1593|cytochrome P450, family 27, subfamily A, polypeptide 1	0.0	
chr3	38178943	38179073	reg1033922.p1	3.587	+	TSC_hg19_v1_chr3_-_38178584 AK316551 AK301056 BC039837 BC000635 NM_001130410 NM_001607	-352	-	TSC_hg19_v1_chr3_-_38178570 BC025780	-436	-	AF035295 TSC_hg19_v1_chr3_-_38178569 CU677013 CU680144 DQ891298 DQ893346 DQ894482 AK303251 AB529164 BC014474 X12966 X14813 AK025138 AK293716 BC011977	-492	-	NM_001172566 NM_001172567 NM_001172568 NM_001172569 NM_002468 TSC_hg19_v1_chr3_+_38180156 AK296716 U84408 BX537602 AK298650 AK300448 AK296570 AK298666 AB463903 AK300051 BC013589 AL832906 AB446470 AK304676 BT007376	1076	+	TSC_hg19_v1_chr3_+_38206993 AB017642 NM_005109 BC008726	28033	+	TSC_hg19_v1_chr3_+_38207137 AK309634	28137	+	AK316551|ACAA1|30|acetyl-CoA acyltransferase 1##AK301056|ACAA1|30|acetyl-CoA acyltransferase 1##BC039837|ACAA1|30|acetyl-CoA acyltransferase 1##BC000635|ACAA1|30|acetyl-CoA acyltransferase 1##NM_001130410|ACAA1|30|acetyl-CoA acyltransferase 1##NM_001607|ACAA1|30|acetyl-CoA acyltransferase 1##BC025780|ACAA1|30|acetyl-CoA acyltransferase 1##AF035295|ACAA1|30|acetyl-CoA acyltransferase 1##DQ891298|ACAA1|30|acetyl-CoA acyltransferase 1##DQ893346|ACAA1|30|acetyl-CoA acyltransferase 1##DQ894482|ACAA1|30|acetyl-CoA acyltransferase 1##AK303251|ACAA1|30|acetyl-CoA acyltransferase 1##BC014474|ACAA1|30|acetyl-CoA acyltransferase 1##X12966|ACAA1|30|acetyl-CoA acyltransferase 1##X14813|ACAA1|30|acetyl-CoA acyltransferase 1##AK025138|ACAA1|30|acetyl-CoA acyltransferase 1##AK293716|ACAA1|30|acetyl-CoA acyltransferase 1##BC011977|ACAA1|30|acetyl-CoA acyltransferase 1##NM_001172566|MYD88|4615|myeloid differentiation primary response gene (88)##NM_001172567|MYD88|4615|myeloid differentiation primary response gene (88)##NM_001172568|MYD88|4615|myeloid differentiation primary response gene (88)##NM_001172569|MYD88|4615|myeloid differentiation primary response gene (88)##NM_002468|MYD88|4615|myeloid differentiation primary response gene (88)##AK296716|MYD88|4615|myeloid differentiation primary response gene (88)##U84408|MYD88|4615|myeloid differentiation primary response gene (88)##BX537602|MYD88|4615|myeloid differentiation primary response gene (88)##AK298650|MYD88|4615|myeloid differentiation primary response gene (88)##AK300448|MYD88|4615|myeloid differentiation primary response gene (88)##AK296570|MYD88|4615|myeloid differentiation primary response gene (88)##AK298666|MYD88|4615|myeloid differentiation primary response gene (88)##AK300051|MYD88|4615|myeloid differentiation primary response gene (88)##BC013589|MYD88|4615|myeloid differentiation primary response gene (88)##AL832906|MYD88|4615|myeloid differentiation primary response gene (88)##AB446470|MYD88|4615|myeloid differentiation primary response gene (88)##AK304676|MYD88|4615|myeloid differentiation primary response gene (88)##BT007376|MYD88|4615|myeloid differentiation primary response gene (88)##AB017642|OXSR1|9943|oxidative-stress responsive 1##NM_005109|OXSR1|9943|oxidative-stress responsive 1##BC008726|OXSR1|9943|oxidative-stress responsive 1##AK309634|OXSR1|9943|oxidative-stress responsive 1	0.0	
chr4	120330554	120330649	reg1033444.p1	3.587	+	CU686944 AK025079 BC069617 BC069466 BC069625 BC069637 BC111791 NM_000134	-87315	-	AY605045 NM_001170330	-105002	-	TSC_hg19_v1_chr4_-_120221773 AK025703 AF075061 BC017399 NM_001001701	-108767	-	TSC_hg19_v1_chr4_-_120375778 BC070391	45177	-	AM392687 AM392735 AM392945 AM393171 AM393311 AM393426 AM393432 AM393814 AY264918 AB015656 NM_033430 AF155193 TSC_hg19_v1_chr4_-_120548474	217804	-	TSC_hg19_v1_chr4_-_120549121 AF155194 NM_033437	218575	-	AK025079|FABP2|2169|fatty acid binding protein 2, intestinal##BC069617|FABP2|2169|fatty acid binding protein 2, intestinal##BC069466|FABP2|2169|fatty acid binding protein 2, intestinal##BC069625|FABP2|2169|fatty acid binding protein 2, intestinal##BC069637|FABP2|2169|fatty acid binding protein 2, intestinal##BC111791|FABP2|2169|fatty acid binding protein 2, intestinal##NM_000134|FABP2|2169|fatty acid binding protein 2, intestinal##AY605045|C4orf3|401152|chromosome 4 open reading frame 3##NM_001170330|C4orf3|401152|chromosome 4 open reading frame 3##AK025703|C4orf3|401152|chromosome 4 open reading frame 3##AF075061|C4orf3|401152|chromosome 4 open reading frame 3##BC017399|C4orf3|401152|chromosome 4 open reading frame 3##NM_001001701|C4orf3|401152|chromosome 4 open reading frame 3##AM392687|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM392735|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM392945|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393171|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393311|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393426|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393432|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AM393814|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AY264918|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AB015656|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033430|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155193|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##AF155194|PDE5A|8654|phosphodiesterase 5A, cGMP-specific##NM_033437|PDE5A|8654|phosphodiesterase 5A, cGMP-specific	1.092952	CTCF.p2:-23:0.988
chr4	38910712	38910806	reg1040634.p2	3.587	+	TSC_hg19_v1_chr4_+_38869390 NM_138389 AK304050 AK296859 AK292831 BC040452	-41368	+	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	-52331	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	-104340	-	BC030803 BC060512 AK026888 NM_024943	123251	-	TSC_hg19_v1_chr4_+_39046535 NM_001007075 NM_001171654 BC053860 AB208820	135679	+	AK289785 NM_015990 NM_199039	153092	+	NM_138389|FAM114A1|92689|family with sequence similarity 114, member A1##AK304050|FAM114A1|92689|family with sequence similarity 114, member A1##AK296859|FAM114A1|92689|family with sequence similarity 114, member A1##AK292831|FAM114A1|92689|family with sequence similarity 114, member A1##BC040452|FAM114A1|92689|family with sequence similarity 114, member A1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##BC030803|TMEM156|80008|transmembrane protein 156##BC060512|TMEM156|80008|transmembrane protein 156##AK026888|TMEM156|80008|transmembrane protein 156##NM_024943|TMEM156|80008|transmembrane protein 156##NM_001007075|KLHL5|51088|kelch-like 5 (Drosophila)##NM_001171654|KLHL5|51088|kelch-like 5 (Drosophila)##BC053860|KLHL5|51088|kelch-like 5 (Drosophila)##AB208820|KLHL5|51088|kelch-like 5 (Drosophila)##AK289785|KLHL5|51088|kelch-like 5 (Drosophila)##NM_015990|KLHL5|51088|kelch-like 5 (Drosophila)##NM_199039|KLHL5|51088|kelch-like 5 (Drosophila)	0.0	
chr4	71891972	71892153	reg1039273.p2	3.587	+	M60527 TSC_hg19_v1_chr4_+_71859434 BC114617 JF806429 BT019941 BT019942 CR536527 CR541876	-32591	+	TSC_hg19_v1_chr4_+_71859320 NM_000788 AK303292 AK313523 BC103764	-32755	+	NM_001244766 NM_001244767 NM_173468 AK093545 AX748194 TSC_hg19_v1_chr4_+_71768085 AK299481 BC038112 AK313513	-123949	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	160661	+	AF069510 AB470072 AF053753 AF053754 AF310248 EF531618 TSC_hg19_v1_chr4_+_72102322	210224	+	BC030977 NM_003759 AF007216 AK308038 CU689062	312805	+	M60527|DCK|1633|deoxycytidine kinase##BC114617|DCK|1633|deoxycytidine kinase##JF806429|DCK|1633|deoxycytidine kinase##BT019941|DCK|1633|deoxycytidine kinase##BT019942|DCK|1633|deoxycytidine kinase##CR536527|DCK|1633|deoxycytidine kinase##CR541876|DCK|1633|deoxycytidine kinase##NM_000788|DCK|1633|deoxycytidine kinase##AK303292|DCK|1633|deoxycytidine kinase##AK313523|DCK|1633|deoxycytidine kinase##BC103764|DCK|1633|deoxycytidine kinase##NM_001244766|MOB1B|92597|MOB kinase activator 1B##NM_001244767|MOB1B|92597|MOB kinase activator 1B##NM_173468|MOB1B|92597|MOB kinase activator 1B##AK093545|MOB1B|92597|MOB kinase activator 1B##AK299481|MOB1B|92597|MOB kinase activator 1B##BC038112|MOB1B|92597|MOB kinase activator 1B##AK313513|MOB1B|92597|MOB kinase activator 1B##AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	0.0	
chr5	80502983	80503076	reg1042727.p1	3.587	+	AF023130 AF181250 TSC_hg19_v1_chr5_+_80256561	-246470	+	TSC_hg19_v1_chr5_+_80256463 BC126112 BC136296 BC143870 NM_006909	-246547	+	TSC_hg19_v1_chr5_-_79950786 BC003584 BC071996 NM_000791	-552234	-	NM_001099735 NM_001099736 NM_001825 TSC_hg19_v1_chr5_+_80529140 AK313293 BC029140 AK122769	26119	+	TSC_hg19_v1_chr5_-_80597338 AK096014	94296	-	AK092460 TSC_hg19_v1_chr5_-_80597373 AK096680	94343	-	AF023130|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##AF181250|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC126112|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC136296|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC143870|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##NM_006909|RASGRF2|5924|Ras protein-specific guanine nucleotide-releasing factor 2##BC003584|DHFR|1719|dihydrofolate reductase##BC071996|DHFR|1719|dihydrofolate reductase##NM_000791|DHFR|1719|dihydrofolate reductase##NM_001099735|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001099736|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##NM_001825|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK313293|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##BC029140|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK122769|CKMT2|1160|creatine kinase, mitochondrial 2 (sarcomeric)##AK096014|LOC100131067|100131067|uncharacterized LOC100131067##AK092460|LOC100131067|100131067|uncharacterized LOC100131067##AK096680|LOC100131067|100131067|uncharacterized LOC100131067	0.464528	CTCF.p2:-1:0.465
chr8	26295270	26295390	reg1041480.p2	3.587	+	NM_004331 TSC_hg19_v1_chr8_+_26240583 AF452712 AK300286 AL132665 BC009603 AF067396 AF079221 AF060922 AK307195 AK300727 AF536326 AB004788 AK290213 BC001559 AB527613 BT019500 BT019501 CR456701 EU831983 EU832076	-54746	+	AK303981 NM_001177591	-144599	+	TSC_hg19_v1_chr8_+_26149092 M64929 AY189686	-146136	+	BC047515 TSC_hg19_v1_chr8_-_26371389 BC036489 AK055325 NM_007257	76104	-	TSC_hg19_v1_chr8_+_26371546 AK092377 NM_001197293 AB370195	76298	+	NM_001386 TSC_hg19_v1_chr8_+_26435441 BX647115 BC067109	140071	+	NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK303981|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##NM_001177591|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##M64929|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AY189686|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##BC047515|PNMA2|10687|paraneoplastic antigen MA2##BC036489|PNMA2|10687|paraneoplastic antigen MA2##AK055325|PNMA2|10687|paraneoplastic antigen MA2##NM_007257|PNMA2|10687|paraneoplastic antigen MA2##AK092377|DPYSL2|1808|dihydropyrimidinase-like 2##NM_001197293|DPYSL2|1808|dihydropyrimidinase-like 2##AB370195|DPYSL2|1808|dihydropyrimidinase-like 2##NM_001386|DPYSL2|1808|dihydropyrimidinase-like 2##BX647115|DPYSL2|1808|dihydropyrimidinase-like 2##BC067109|DPYSL2|1808|dihydropyrimidinase-like 2	0.971154	CTCF.p2:-21:0.971
chr1	155248325	155248423	reg1036870.p1	3.586	+	AK291995 TSC_hg19_v1_chr1_-_155247591	-829	-	TSC_hg19_v1_chr1_+_155247250 AK299333 BC111364 AF488550 NM_020897 AK055840 AB040968	-997	+	TSC_hg19_v1_chr1_-_155243282 BC014067 L29216 L29218 BC002346 BC053603 AK303696 NM_003993	-5305	-	AK298399 M15465 AK225947 NM_181871	22390	-	AB590420 EU176228 CU693044 BC025737 AB015983 NM_000298	22831	-	NM_001135822 NM_001242824 NM_001242825 NM_002004 TSC_hg19_v1_chr1_+_155278642	30221	+	AK291995|CLK2|1196|CDC-like kinase 2##AK299333|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3##BC111364|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3##AF488550|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3##NM_020897|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3##AK055840|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3##AB040968|HCN3|57657|hyperpolarization activated cyclic nucleotide-gated potassium channel 3##BC014067|CLK2|1196|CDC-like kinase 2##L29216|CLK2|1196|CDC-like kinase 2##L29218|CLK2|1196|CDC-like kinase 2##BC053603|CLK2|1196|CDC-like kinase 2##AK303696|CLK2|1196|CDC-like kinase 2##NM_003993|CLK2|1196|CDC-like kinase 2##AK298399|PKLR|5313|pyruvate kinase, liver and RBC##M15465|PKLR|5313|pyruvate kinase, liver and RBC##AK225947|PKLR|5313|pyruvate kinase, liver and RBC##NM_181871|PKLR|5313|pyruvate kinase, liver and RBC##EU176228|PKLR|5313|pyruvate kinase, liver and RBC##BC025737|PKLR|5313|pyruvate kinase, liver and RBC##AB015983|PKLR|5313|pyruvate kinase, liver and RBC##NM_000298|PKLR|5313|pyruvate kinase, liver and RBC##NM_001135822|FDPS|2224|farnesyl diphosphate synthase##NM_001242824|FDPS|2224|farnesyl diphosphate synthase##NM_001242825|FDPS|2224|farnesyl diphosphate synthase##NM_002004|FDPS|2224|farnesyl diphosphate synthase	0.0	
chr11	77706131	77706248	reg1038353.p1	3.586	+	BC009995 TSC_hg19_v1_chr11_-_77705714 AK290866 BC015664 NM_033547	-474	-	AL834171 EU446555 TSC_hg19_v1_chr11_-_77705710 CU679559 AK000455 BC018672	-505	-	TSC_hg19_v1_chr11_+_77532238 AF092136 AK024688 BC002752 NM_024684	-173986	+	BC001062 BC001929 NM_023930	28113	-	TSC_hg19_v1_chr11_+_77774906 AK311975 NM_003251 BC031989 EU447014	68724	+	CR533448 AB528753 AM392713 TSC_hg19_v1_chr11_-_77790909 AK022785 AF087659 AF369951 AK098173 AL050278 AF369952 AK023013 AF070652 BC007323	84685	-	BC009995|INTS4|92105|integrator complex subunit 4##AK290866|INTS4|92105|integrator complex subunit 4##BC015664|INTS4|92105|integrator complex subunit 4##NM_033547|INTS4|92105|integrator complex subunit 4##AL834171|INTS4|92105|integrator complex subunit 4##EU446555|INTS4|92105|integrator complex subunit 4##AK000455|INTS4|92105|integrator complex subunit 4##BC018672|INTS4|92105|integrator complex subunit 4##AF092136|C11orf67|28971|chromosome 11 open reading frame 67##AK024688|C11orf67|28971|chromosome 11 open reading frame 67##BC002752|C11orf67|28971|chromosome 11 open reading frame 67##NM_024684|C11orf67|28971|chromosome 11 open reading frame 67##BC001062|KCTD14|65987|potassium channel tetramerisation domain containing 14##BC001929|KCTD14|65987|potassium channel tetramerisation domain containing 14##NM_023930|KCTD14|65987|potassium channel tetramerisation domain containing 14##AK311975|THRSP|7069|thyroid hormone responsive##NM_003251|THRSP|7069|thyroid hormone responsive##BC031989|THRSP|7069|thyroid hormone responsive##EU447014|THRSP|7069|thyroid hormone responsive##CR533448|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AM392713|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AK022785|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF087659|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF369951|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AK098173|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AL050278|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF369952|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AK023013|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##AF070652|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa##BC007323|NDUFC2|4718|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2, 14.5kDa	0.0	
chr12	109248331	109248441	reg1023732.p2	3.586	+	AK095421 NM_001161331	-27060	-	TSC_hg19_v1_chr12_-_109125295 AK023205 AK223073 AK304839 AK311315 AK316065 AB030656 NM_014325	-123094	-	TSC_hg19_v1_chr12_-_109125284 BC002342 AB209909	-123106	-	AB072355 AB072356 TSC_hg19_v1_chr12_-_109251307	2904	-	TSC_hg19_v1_chr12_-_109251360 BC062341 NM_001161330 NM_018984	3036	-	NM_001917 AX741655 AX741656 AX741658 AX776478 AX776479 AX786386 AK312995 BX538210 BC029057 BC074770	25534	+	AK095421|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161331|SSH1|54434|slingshot homolog 1 (Drosophila)##AK023205|CORO1C|23603|coronin, actin binding protein, 1C##AK223073|CORO1C|23603|coronin, actin binding protein, 1C##AK304839|CORO1C|23603|coronin, actin binding protein, 1C##AK311315|CORO1C|23603|coronin, actin binding protein, 1C##AK316065|CORO1C|23603|coronin, actin binding protein, 1C##AB030656|CORO1C|23603|coronin, actin binding protein, 1C##NM_014325|CORO1C|23603|coronin, actin binding protein, 1C##BC002342|CORO1C|23603|coronin, actin binding protein, 1C##AB209909|CORO1C|23603|coronin, actin binding protein, 1C##AB072355|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072356|SSH1|54434|slingshot homolog 1 (Drosophila)##BC062341|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161330|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_018984|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001917|DAO|1610|D-amino-acid oxidase##AX741655|DAO|1610|D-amino-acid oxidase##AX741656|DAO|1610|D-amino-acid oxidase##AX741658|DAO|1610|D-amino-acid oxidase##AX776478|DAO|1610|D-amino-acid oxidase##AX776479|DAO|1610|D-amino-acid oxidase##AX786386|DAO|1610|D-amino-acid oxidase##AK312995|DAO|1610|D-amino-acid oxidase##BX538210|DAO|1610|D-amino-acid oxidase##BC029057|DAO|1610|D-amino-acid oxidase##BC074770|DAO|1610|D-amino-acid oxidase	0.0	
chr1	26147120	26147236	reg1041571.p1	3.586	+	TSC_hg19_v1_chr1_+_26146696 AL512766 NM_019557	-513	+	TSC_hg19_v1_chr1_+_26146468 AB075880 AK314297 AK299221 AF173891	-707	+	TSC_hg19_v1_chr1_+_26146429 NM_001099625 NM_001099627 BX647921	-768	+	TSC_hg19_v1_chr1_-_26147289 AK054768	129	-	BC017175 NM_001099626 AY007100	177	+	AK024326 NM_024037 AK223419 BC000209 GQ844687	38696	-	AL512766|FAM54B|56181|family with sequence similarity 54, member B##NM_019557|FAM54B|56181|family with sequence similarity 54, member B##AB075880|FAM54B|56181|family with sequence similarity 54, member B##AK314297|FAM54B|56181|family with sequence similarity 54, member B##AK299221|FAM54B|56181|family with sequence similarity 54, member B##AF173891|FAM54B|56181|family with sequence similarity 54, member B##NM_001099625|FAM54B|56181|family with sequence similarity 54, member B##NM_001099627|FAM54B|56181|family with sequence similarity 54, member B##BX647921|FAM54B|56181|family with sequence similarity 54, member B##AK054768|LOC646471|646471|uncharacterized LOC646471##BC017175|FAM54B|56181|family with sequence similarity 54, member B##NM_001099626|FAM54B|56181|family with sequence similarity 54, member B##AY007100|FAM54B|56181|family with sequence similarity 54, member B##AK024326|C1orf135|79000|chromosome 1 open reading frame 135##NM_024037|C1orf135|79000|chromosome 1 open reading frame 135##AK223419|C1orf135|79000|chromosome 1 open reading frame 135##BC000209|C1orf135|79000|chromosome 1 open reading frame 135##GQ844687|C1orf135|79000|chromosome 1 open reading frame 135	0.18942	
chr13	103451584	103451660	reg1040536.p2	3.586	+	BC051860 TSC_hg19_v1_chr13_-_103451388 AY358959 AK074974 AK222567 AK225103 AK309238 BC001297 NM_024089	-285	-	NM_138779 TSC_hg19_v1_chr13_-_103426169	-25464	-	TSC_hg19_v1_chr13_-_103426133 BC048011 BC015148	-25485	-	AF411385 NM_001159596 NM_017693 TSC_hg19_v1_chr13_+_103451468 AK290658 AK304391 BC112339	19	+	NM_001204425 BC075084 BC075085 AB209312 AK000166 AK225229 BC020663 BC051813	8038	+	TSC_hg19_v1_chr13_+_103498240 NM_000123 BC031522 AF462447	46587	+	BC051860|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AY358959|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AK074974|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AK222567|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AK225103|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##AK309238|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##BC001297|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##NM_024089|KDELC1|79070|KDEL (Lys-Asp-Glu-Leu) containing 1##NM_138779|C13orf27|93081|chromosome 13 open reading frame 27##BC048011|C13orf27|93081|chromosome 13 open reading frame 27##BC015148|C13orf27|93081|chromosome 13 open reading frame 27##AF411385|BIVM|54841|basic, immunoglobulin-like variable motif containing##NM_001159596|BIVM|54841|basic, immunoglobulin-like variable motif containing##NM_017693|BIVM|54841|basic, immunoglobulin-like variable motif containing##AK290658|BIVM|54841|basic, immunoglobulin-like variable motif containing##AK304391|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC112339|BIVM|54841|basic, immunoglobulin-like variable motif containing##NM_001204425|BIVM-ERCC5|100533467|BIVM-ERCC5 readthrough##BC075084|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC075085|BIVM|54841|basic, immunoglobulin-like variable motif containing##AB209312|BIVM-ERCC5|100533467|BIVM-ERCC5 readthrough##AK000166|BIVM|54841|basic, immunoglobulin-like variable motif containing##AK225229|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC020663|BIVM|54841|basic, immunoglobulin-like variable motif containing##BC051813|BIVM|54841|basic, immunoglobulin-like variable motif containing##NM_000123|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##BC031522|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AF462447|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5	0.0	
chr15	45011576	45011660	reg1029766.p1	3.586	+	TSC_hg19_v1_chr15_+_45003710 NM_004048 AK303560 AK315776 S82297 S82300 S54761 BC032589 BC064910 X07621 AY007153 AB021288 AB463439 AY187687 CR457066 DQ839493 DQ839494 DQ884406 DQ890551 DQ893711 V00567	-7897	+	AK130783 TSC_hg19_v1_chr15_-_45003540	-8072	-	BC036924 NM_001145112	-42533	-	AK311550 TSC_hg19_v1_chr15_+_45021275 DQ232883	9635	+	BC031266 TSC_hg19_v1_chr15_+_45021331	9713	+	NM_080745 NM_182985	16941	+	NM_004048|B2M|567|beta-2-microglobulin##AK303560|B2M|567|beta-2-microglobulin##AK315776|B2M|567|beta-2-microglobulin##S82297|B2M|567|beta-2-microglobulin##S82300|B2M|567|beta-2-microglobulin##S54761|B2M|567|beta-2-microglobulin##BC032589|B2M|567|beta-2-microglobulin##BC064910|B2M|567|beta-2-microglobulin##X07621|B2M|567|beta-2-microglobulin##AY007153|B2M|567|beta-2-microglobulin##AB021288|B2M|567|beta-2-microglobulin##AY187687|B2M|567|beta-2-microglobulin##CR457066|B2M|567|beta-2-microglobulin##DQ839493|B2M|567|beta-2-microglobulin##DQ839494|B2M|567|beta-2-microglobulin##DQ884406|B2M|567|beta-2-microglobulin##DQ890551|B2M|567|beta-2-microglobulin##DQ893711|B2M|567|beta-2-microglobulin##V00567|B2M|567|beta-2-microglobulin##BC036924|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##NM_001145112|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##DQ232883|TRIM69|140691|tripartite motif containing 69##BC031266|TRIM69|140691|tripartite motif containing 69##NM_080745|TRIM69|140691|tripartite motif containing 69##NM_182985|TRIM69|140691|tripartite motif containing 69	0.0	
chr20	44519845	44520026	reg1042836.p2	3.586	+	AB587593 AJ295985 TSC_hg19_v1_chr20_-_44519848 BC074737 BC105935 BC107485 NM_080749 AK054821	-129	-	NM_000308 NM_001127695 NM_001167594	-345	+	AK172808 TSC_hg19_v1_chr20_+_44518912	-1088	+	TSC_hg19_v1_chr20_+_44519953 AK304536 AB209705	8	+	TSC_hg19_v1_chr20_+_44519973 AK312898 BC093009 AK307701	55	+	TSC_hg19_v1_chr20_+_44520051 BC000597	127	+	AJ295985|NEURL2|140825|neuralized homolog 2 (Drosophila)##BC074737|NEURL2|140825|neuralized homolog 2 (Drosophila)##BC105935|NEURL2|140825|neuralized homolog 2 (Drosophila)##BC107485|NEURL2|140825|neuralized homolog 2 (Drosophila)##NM_080749|NEURL2|140825|neuralized homolog 2 (Drosophila)##AK054821|NEURL2|140825|neuralized homolog 2 (Drosophila)##NM_000308|CTSA|5476|cathepsin A##NM_001127695|CTSA|5476|cathepsin A##NM_001167594|CTSA|5476|cathepsin A##AK172808|CTSA|5476|cathepsin A##AK304536|CTSA|5476|cathepsin A##AB209705|CTSA|5476|cathepsin A##AK312898|CTSA|5476|cathepsin A##BC093009|CTSA|5476|cathepsin A##AK307701|CTSA|5476|cathepsin A##BC000597|CTSA|5476|cathepsin A	0.075069	
chr3	111837283	111837412	reg1030317.p2	3.586	+	TSC_hg19_v1_chr3_+_111805267 AK303588 NM_001171747 NM_024616 AY830714 AK026839 BC017064 AK298076	-32119	+	AK131211 NM_001042575 BC117322	-78839	+	NM_001008273 BC004477 TSC_hg19_v1_chr3_+_111718179 AF112201 BT007408 CU677265	-119210	+	CU688884 BC030506 AY212246 AK313368 AK128276 AF521911 NM_001190259 NM_001190260 NM_152785	14712	-	BC044801 NM_183061 AK128084	175741	-	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	214611	+	AK303588|C3orf52|79669|chromosome 3 open reading frame 52##NM_001171747|C3orf52|79669|chromosome 3 open reading frame 52##NM_024616|C3orf52|79669|chromosome 3 open reading frame 52##AY830714|C3orf52|79669|chromosome 3 open reading frame 52##AK026839|C3orf52|79669|chromosome 3 open reading frame 52##BC017064|C3orf52|79669|chromosome 3 open reading frame 52##AK298076|C3orf52|79669|chromosome 3 open reading frame 52##AK131211|TMPRSS7|344805|transmembrane protease, serine 7##NM_001042575|TMPRSS7|344805|transmembrane protease, serine 7##BC117322|TMPRSS7|344805|transmembrane protease, serine 7##NM_001008273|TAGLN3|29114|transgelin 3##AF112201|TAGLN3|29114|transgelin 3##BT007408|TAGLN3|29114|transgelin 3##BC030506|GCET2|257144|germinal center expressed transcript 2##AY212246|GCET2|257144|germinal center expressed transcript 2##AK313368|GCET2|257144|germinal center expressed transcript 2##AF521911|GCET2|257144|germinal center expressed transcript 2##NM_001190259|GCET2|257144|germinal center expressed transcript 2##NM_001190260|GCET2|257144|germinal center expressed transcript 2##NM_152785|GCET2|257144|germinal center expressed transcript 2##BC044801|SLC9A10|285335|solute carrier family 9, member 10##NM_183061|SLC9A10|285335|solute carrier family 9, member 10##AK128084|SLC9A10|285335|solute carrier family 9, member 10##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule	0.0	
chr4	166018259	166018326	reg1010154.p2	3.586	+	AK093201 AX747987 NM_152620	-65142	+	BC089393 NM_001012414	-119475	-	TSC_hg19_v1_chr4_+_165878133 BC022381 CU692592	-140141	+	CU690322 BC036301 BX648915 BX538029 TSC_hg19_v1_chr4_-_166033990	15669	-	TSC_hg19_v1_chr4_-_166034013 NM_001100389	15733	-	NM_007246 TSC_hg19_v1_chr4_+_166128778 BC022503	110491	+	AK093201|TRIM60|166655|tripartite motif containing 60##NM_152620|TRIM60|166655|tripartite motif containing 60##BC089393|TRIM61|391712|tripartite motif containing 61##NM_001012414|TRIM61|391712|tripartite motif containing 61##BC022381|C4orf39|152756|chromosome 4 open reading frame 39##BC036301|TMEM192|201931|transmembrane protein 192##BX648915|TMEM192|201931|transmembrane protein 192##BX538029|TMEM192|201931|transmembrane protein 192##NM_001100389|TMEM192|201931|transmembrane protein 192##NM_007246|KLHL2|11275|kelch-like 2, Mayven (Drosophila)##BC022503|KLHL2|11275|kelch-like 2, Mayven (Drosophila)	0.0	
chr7	72600760	72600872	reg1037277.p1	3.586	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	-31785	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-175574	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-203942	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	122008	-	AK057366 AY081948 AY081949 NM_178125	141268	-	NM_001135211 AK302121 NM_003602 AK310255 BC036817 AF038847 CU691432 EU176233 EU176537 GQ129339 GQ129340	141476	+	BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50##NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa##AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa##NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa##AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa##BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa##AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa	0.324006	CTCF.p2:9:0.324
chrX	7919075	7919198	reg1034708.p2	3.586	+	AK304586 TSC_hg19_v1_chrX_-_7895766 NM_001142389 NM_001172672	-23365	-	AK289888 U03886 NM_004650 BC020746	-23686	-	AF167081 NM_013452	-108834	+	AF167079 NM_016378	220171	-	AF167078 AF167080 NM_001001888	513734	+	X60299 TSC_hg19_v1_chrX_-_8700155	781007	-	AK304586|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001142389|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001172672|PNPLA4|8228|patatin-like phospholipase domain containing 4##AK289888|PNPLA4|8228|patatin-like phospholipase domain containing 4##U03886|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_004650|PNPLA4|8228|patatin-like phospholipase domain containing 4##BC020746|PNPLA4|8228|patatin-like phospholipase domain containing 4##AF167081|VCX|26609|variable charge, X-linked##NM_013452|VCX|26609|variable charge, X-linked##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016378|VCX2|51480|variable charge, X-linked 2##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167080|VCX3B|425054|variable charge, X-linked 3B##NM_001001888|VCX3B|425054|variable charge, X-linked 3B##X60299|KAL1|3730|Kallmann syndrome 1 sequence	0.0	
chr10	112506708	112506888	reg1002655.p2	3.585	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-102669	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-162683	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-179306	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	124814	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	124916	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	171898	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.0	
chr10	88731537	88731718	reg1035051.p2	3.585	+	TSC_hg19_v1_chr10_-_88730968 AK128041	-630	-	AK097165 NM_133447	-1130	+	NM_006829 TSC_hg19_v1_chr10_+_88728238 AK304688 AK312031 BC004471 D45370	-3399	+	NM_001146157 BC171878 BC171915	48423	+	AK122685 TSC_hg19_v1_chr10_-_88853845 AK294685	122208	-	TSC_hg19_v1_chr10_-_88854537 GU727646 AB590770 M37154 X07674 X07769	122898	-	AK128041|LOC100133190|100133190|uncharacterized LOC100133190##AK097165|AGAP11|119385|ankyrin repeat and GTPase domain Arf GTPase activating protein 11##NM_133447|AGAP11|119385|ankyrin repeat and GTPase domain Arf GTPase activating protein 11##NM_006829|C10orf116|10974|chromosome 10 open reading frame 116##AK312031|C10orf116|10974|chromosome 10 open reading frame 116##BC004471|C10orf116|10974|chromosome 10 open reading frame 116##D45370|C10orf116|10974|chromosome 10 open reading frame 116##NM_001146157|FAM25A|643161|family with sequence similarity 25, member A##BC171878|FAM25A|643161|family with sequence similarity 25, member A##BC171915|FAM25A|643161|family with sequence similarity 25, member A##AK122685|GLUD1|2746|glutamate dehydrogenase 1##AK294685|GLUD1|2746|glutamate dehydrogenase 1##GU727646|GLUD1|2746|glutamate dehydrogenase 1##M37154|GLUD1|2746|glutamate dehydrogenase 1##X07674|GLUD1|2746|glutamate dehydrogenase 1##X07769|GLUD1|2746|glutamate dehydrogenase 1	0.028205	
chr1	10571385	10571455	reg1029424.p2	3.585	+	TSC_hg19_v1_chr1_+_10535017 AK293684 AK307416 NM_004565 AK298136 AK002194 BC006327 AK310726 BC017848 BC054017 AB017546 AF045186 AK313046 AB527589 CR450321 CR542083 CU675355 DQ892775 DQ895905	-36409	+	TSC_hg19_v1_chr1_-_10532605 NM_004401 NM_213566	-38798	-	TSC_hg19_v1_chr1_-_10532555 AB590590 BT006980 CU675773 BC000037 AF103799 AF087573 BC007721 AK313317 AK222546 U91985 BC007112	-38865	-	TSC_hg19_v1_chr1_-_10754567 AK311700 AK293839	183131	-	DQ217660 AK092289 AX747454 NM_001079843 NM_017766	285285	-	NM_001170754	470673	-	AK293684|PEX14|5195|peroxisomal biogenesis factor 14##AK307416|PEX14|5195|peroxisomal biogenesis factor 14##NM_004565|PEX14|5195|peroxisomal biogenesis factor 14##AK298136|PEX14|5195|peroxisomal biogenesis factor 14##AK002194|PEX14|5195|peroxisomal biogenesis factor 14##BC006327|PEX14|5195|peroxisomal biogenesis factor 14##AK310726|PEX14|5195|peroxisomal biogenesis factor 14##BC017848|PEX14|5195|peroxisomal biogenesis factor 14##BC054017|PEX14|5195|peroxisomal biogenesis factor 14##AB017546|PEX14|5195|peroxisomal biogenesis factor 14##AF045186|PEX14|5195|peroxisomal biogenesis factor 14##AK313046|PEX14|5195|peroxisomal biogenesis factor 14##CR450321|PEX14|5195|peroxisomal biogenesis factor 14##CR542083|PEX14|5195|peroxisomal biogenesis factor 14##DQ892775|PEX14|5195|peroxisomal biogenesis factor 14##DQ895905|PEX14|5195|peroxisomal biogenesis factor 14##NM_004401|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##NM_213566|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BT006980|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC000037|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF103799|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AF087573|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007721|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK313317|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK222546|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##U91985|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##BC007112|DFFA|1676|DNA fragmentation factor, 45kDa, alpha polypeptide##AK311700|CASZ1|54897|castor zinc finger 1##AK293839|CASZ1|54897|castor zinc finger 1##DQ217660|CASZ1|54897|castor zinc finger 1##AK092289|CASZ1|54897|castor zinc finger 1##NM_001079843|CASZ1|54897|castor zinc finger 1##NM_017766|CASZ1|54897|castor zinc finger 1##NM_001170754|C1orf127|148345|chromosome 1 open reading frame 127	0.0	
chr11	19464129	19464197	reg1030785.p2	3.585	+	AB063115 NM_001111018 AJ488205	-91848	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-200962	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-201688	-	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	270703	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	580225	+	TSC_hg19_v1_chr11_+_20049136 AK307574	584969	+	AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2	0.0	
chr17	16867988	16868162	reg1031578.p1	3.585	+	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-274471	+	AK131401 NM_020787	-310914	-	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-395579	-	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	7329	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	77889	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	241538	-	EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6	0.0	
chr17	40684006	40684108	reg1034627.p1	3.585	+	TSC_hg19_v1_chr17_+_40610941 AK295682	-73106	+	TSC_hg19_v1_chr17_+_40610920 CR627443 BC032398	-73131	+	AK294512 TSC_hg19_v1_chr17_+_40610908	-73149	+	NM_000263	3893	+	U40846 TSC_hg19_v1_chr17_+_40688258	4167	+	TSC_hg19_v1_chr17_+_40688278 BC053991 L78464 U43573	4220	+	AK295682|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##CR627443|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##BC032398|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##AK294512|ATP6V0A1|535|ATPase, H+ transporting, lysosomal V0 subunit a1##NM_000263|NAGLU|4669|N-acetylglucosaminidase, alpha##U40846|NAGLU|4669|N-acetylglucosaminidase, alpha##BC053991|NAGLU|4669|N-acetylglucosaminidase, alpha##L78464|NAGLU|4669|N-acetylglucosaminidase, alpha##U43573|NAGLU|4669|N-acetylglucosaminidase, alpha	0.0	
chr21	42783414	42783553	reg1030432.p1	3.585	+	TSC_hg19_v1_chr21_+_42742025 AK298780	-41464	+	TSC_hg19_v1_chr21_+_42733956 M30818 NM_002463 AK308060 AK126107	-49545	+	AK125528 NM_058186 NM_206964 TSC_hg19_v1_chr21_+_42688738 BC057829 AF375989 AJ409094 AY040086 AY358459 HQ257913 AF494379	-94750	+	AK096355 NM_001144925	8997	+	NM_002462 TSC_hg19_v1_chr21_+_42798165 AK225885 AK315465 NM_001178046 M33882 BC052255	14611	+	AK291813 TSC_hg19_v1_chr21_-_42880030 AK296860 NM_001135099 BC051839 AF270487 BC035623	96504	-	AK298780|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##M30818|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##NM_002463|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK308060|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK126107|LOC100131190|100131190|uncharacterized LOC100131190##AK125528|FAM3B|54097|family with sequence similarity 3, member B##NM_058186|FAM3B|54097|family with sequence similarity 3, member B##NM_206964|FAM3B|54097|family with sequence similarity 3, member B##BC057829|FAM3B|54097|family with sequence similarity 3, member B##AF375989|FAM3B|54097|family with sequence similarity 3, member B##AJ409094|FAM3B|54097|family with sequence similarity 3, member B##AY040086|FAM3B|54097|family with sequence similarity 3, member B##AY358459|FAM3B|54097|family with sequence similarity 3, member B##HQ257913|FAM3B|54097|family with sequence similarity 3, member B##AF494379|FAM3B|54097|family with sequence similarity 3, member B##AK096355|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001144925|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_002462|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK225885|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK315465|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001178046|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##M33882|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##BC052255|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK291813|TMPRSS2|7113|transmembrane protease, serine 2##AK296860|TMPRSS2|7113|transmembrane protease, serine 2##NM_001135099|TMPRSS2|7113|transmembrane protease, serine 2##BC051839|TMPRSS2|7113|transmembrane protease, serine 2##AF270487|TMPRSS2|7113|transmembrane protease, serine 2##BC035623|TMPRSS2|7113|transmembrane protease, serine 2	0.658672	CTCF.p2:16:0.659
chr2	75357454	75357561	reg1039492.p1	3.585	+	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-171722	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-295256	-	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	-296247	+	AK289765 NM_001058 NM_015727	69121	-	BC016157 TSC_hg19_v1_chr2_-_75788066	430540	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	430583	-	NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2##AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A	0.099695	
chr3	47324346	47324526	reg1020845.p4	3.585	+	NM_025010 TSC_hg19_v1_chr3_+_47324433 AK023765 AK291477 AK295292 BX537953 BC015962 AB527175 AM393269 AM393767 BC032620	-8	+	BC015311 NM_001134878 NM_022342 NM_182902	-141	-	AB384629 TSC_hg19_v1_chr3_-_47205422 AK131371 NM_014159	-118997	-	AB040904 NM_015466 TSC_hg19_v1_chr3_+_47422510 AK055157 AK299906 AK295888 AK289502 AB025194 AF290614 AK295877 BC089042	98096	+	TSC_hg19_v1_chr3_-_47517349 AK300311	192901	-	TSC_hg19_v1_chr3_-_47517417 AK291484 D83782 NM_012235	192996	-	NM_025010|KLHL18|23276|kelch-like 18 (Drosophila)##AK023765|KLHL18|23276|kelch-like 18 (Drosophila)##AK291477|KLHL18|23276|kelch-like 18 (Drosophila)##AK295292|KLHL18|23276|kelch-like 18 (Drosophila)##BX537953|KLHL18|23276|kelch-like 18 (Drosophila)##BC015962|KLHL18|23276|kelch-like 18 (Drosophila)##AM393269|KLHL18|23276|kelch-like 18 (Drosophila)##AM393767|KLHL18|23276|kelch-like 18 (Drosophila)##BC032620|KLHL18|23276|kelch-like 18 (Drosophila)##BC015311|KIF9|64147|kinesin family member 9##NM_001134878|KIF9|64147|kinesin family member 9##NM_022342|KIF9|64147|kinesin family member 9##NM_182902|KIF9|64147|kinesin family member 9##AK131371|SETD2|29072|SET domain containing 2##NM_014159|SETD2|29072|SET domain containing 2##AB040904|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##NM_015466|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK055157|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK299906|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295888|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK289502|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AB025194|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AF290614|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK295877|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##BC089042|PTPN23|25930|protein tyrosine phosphatase, non-receptor type 23##AK300311|SCAP|22937|SREBF chaperone##AK291484|SCAP|22937|SREBF chaperone##D83782|SCAP|22937|SREBF chaperone##NM_012235|SCAP|22937|SREBF chaperone	0.0	
chr7	976334	976420	reg1027064.p2	3.585	+	AK300644 AK300859 TSC_hg19_v1_chr7_-_960513	-15863	-	TSC_hg19_v1_chr7_+_916249 BC003550 AK023560 AF132954	-60107	+	TSC_hg19_v1_chr7_+_916188 NM_015949	-60174	+	TSC_hg19_v1_chr7_-_994129 AB587419 BC033747	17738	-	TSC_hg19_v1_chr7_-_994317 NM_006869	17936	-	TSC_hg19_v1_chr7_-_994377 AJ006422	18086	-	AK300644|ADAP1|11033|ArfGAP with dual PH domains 1##AK300859|ADAP1|11033|ArfGAP with dual PH domains 1##BC003550|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AK023560|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##AF132954|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##NM_015949|GET4|51608|golgi to ER traffic protein 4 homolog (S. cerevisiae)##BC033747|ADAP1|11033|ArfGAP with dual PH domains 1##NM_006869|ADAP1|11033|ArfGAP with dual PH domains 1##AJ006422|ADAP1|11033|ArfGAP with dual PH domains 1	0.0	
chr8	8426513	8426694	reg1030591.p1	3.585	+	AK122582 NM_001080826	-187381	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-250715	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-340461	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	133095	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	324335	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	433762	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.0	
chrX	130988731	130988847	reg1040199.p1	3.585	+	TSC_hg19_v1_chrX_-_130964633 AK097911	-24138	-	BC137050 AB529233 NM_001004486	-310791	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-565377	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	168532	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	168851	+	FJ717411 BC114371 AK125336 NM_194277	273171	-	AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4##FJ717411|FRMD7|90167|FERM domain containing 7##BC114371|FRMD7|90167|FERM domain containing 7##AK125336|FRMD7|90167|FERM domain containing 7##NM_194277|FRMD7|90167|FERM domain containing 7	0.33499	CTCF.p2:4:0.335
chr10	64288378	64288529	reg1035512.p1	3.584	+	AJ505150 NM_199452	-8247	+	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	-154410	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	-259914	-	TSC_hg19_v1_chr10_+_64564497 AK127694 NM_032804	276089	+	TSC_hg19_v1_chr10_+_64564619 BC018660 BC028589 BC067740	276204	+	AK091399 TSC_hg19_v1_chr10_-_64576114 BC035625 CR749641	287644	-	AJ505150|ZNF365|22891|zinc finger protein 365##NM_199452|ZNF365|22891|zinc finger protein 365##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##AK127694|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##NM_032804|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC018660|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC028589|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##BC067740|ADO|84890|2-aminoethanethiol (cysteamine) dioxygenase##AK091399|EGR2|1959|early growth response 2##BC035625|EGR2|1959|early growth response 2##CR749641|EGR2|1959|early growth response 2	0.0	
chr11	108463431	108463595	reg1031759.p1	3.584	+	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	-94318	-	BC059411 BC029536 AK303096 NM_152587	-125271	-	TSC_hg19_v1_chr11_+_108093793 AB209133 U33841	-369716	+	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	891	-	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	72301	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	829330	+	AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC029536|C11orf65|160140|chromosome 11 open reading frame 65##AK303096|C11orf65|160140|chromosome 11 open reading frame 65##NM_152587|C11orf65|160140|chromosome 11 open reading frame 65##AB209133|ATM|472|ataxia telangiectasia mutated##U33841|ATM|472|ataxia telangiectasia mutated##BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87	0.0	
chr11	63399036	63399145	reg1034040.p1	3.584	+	NM_001128203 TSC_hg19_v1_chr11_-_63381941	-17149	-	AK313075 NM_007069 TSC_hg19_v1_chr11_-_63381909	-17181	-	BC001387 TSC_hg19_v1_chr11_-_63381880 X92814	-17222	-	TSC_hg19_v1_chr11_-_63438892 AK023383 CU687312 AL117600 BC005096	39763	-	TSC_hg19_v1_chr11_-_63439066 NM_015459 CR936784 BC077727	39980	-	TSC_hg19_v1_chr11_+_63448971 NM_006054 NM_201428 NM_201429 NM_201430 AY427821 AY750848 AK309766 AK075412 AK297533 AK304100 AK307811 BC011394 AK295534 AK308083 BC022993 AB209771 AF059524 AK222898 AF119297 BC100822 BC100823 BC118550 BC118628 AK295758 BC010556 BC105982 BC000634 AK295361 BC105981 AK297529 AB591013 CU679745 AK127079	49956	+	NM_001128203|PLA2G16|11145|phospholipase A2, group XVI##AK313075|PLA2G16|11145|phospholipase A2, group XVI##NM_007069|PLA2G16|11145|phospholipase A2, group XVI##BC001387|PLA2G16|11145|phospholipase A2, group XVI##X92814|PLA2G16|11145|phospholipase A2, group XVI##AK023383|ATL3|25923|atlastin GTPase 3##AL117600|ATL3|25923|atlastin GTPase 3##NM_015459|ATL3|25923|atlastin GTPase 3##CR936784|ATL3|25923|atlastin GTPase 3##BC077727|ATL3|25923|atlastin GTPase 3##NM_006054|RTN3|10313|reticulon 3##NM_201428|RTN3|10313|reticulon 3##NM_201429|RTN3|10313|reticulon 3##NM_201430|RTN3|10313|reticulon 3##AY427821|RTN3|10313|reticulon 3##AY750848|RTN3|10313|reticulon 3##AK309766|RTN3|10313|reticulon 3##AK075412|RTN3|10313|reticulon 3##AK297533|RTN3|10313|reticulon 3##AK304100|RTN3|10313|reticulon 3##AK307811|RTN3|10313|reticulon 3##BC011394|RTN3|10313|reticulon 3##AK295534|RTN3|10313|reticulon 3##AK308083|RTN3|10313|reticulon 3##BC022993|RTN3|10313|reticulon 3##AB209771|RTN3|10313|reticulon 3##AF059524|RTN3|10313|reticulon 3##AK222898|RTN3|10313|reticulon 3##AF119297|RTN3|10313|reticulon 3##BC100822|RTN3|10313|reticulon 3##BC100823|RTN3|10313|reticulon 3##BC118550|RTN3|10313|reticulon 3##BC118628|RTN3|10313|reticulon 3##AK295758|RTN3|10313|reticulon 3##BC010556|RTN3|10313|reticulon 3##BC105982|RTN3|10313|reticulon 3##BC000634|RTN3|10313|reticulon 3##AK295361|RTN3|10313|reticulon 3##BC105981|RTN3|10313|reticulon 3##AK297529|RTN3|10313|reticulon 3##AK127079|RTN3|10313|reticulon 3	0.0	
chr15	91208865	91208958	reg1036777.p1	3.584	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-135715	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-277372	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-277405	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	51703	+	NM_002569 X17094	202973	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	218790	+	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene	0.0	
chr16	22018792	22018860	reg1040456.p1	3.584	+	BC039562 BC021724 BC028605 NM_173806	-6398	-	TSC_hg19_v1_chr16_+_21964701 AB587386 DQ891390 DQ894565	-54105	+	TSC_hg19_v1_chr16_+_21964679 J04973 BC003136	-54141	+	TSC_hg19_v1_chr16_+_22019464 NM_001164579 BC027604 BC053950	662	+	AK098260 AK128606 AK307544 NM_173615	85035	+	TSC_hg19_v1_chr16_+_22217630 NM_013302 AK308757 BC032665	198847	+	BC039562|PDZD9|255762|PDZ domain containing 9##BC021724|PDZD9|255762|PDZ domain containing 9##BC028605|PDZD9|255762|PDZ domain containing 9##NM_173806|PDZD9|255762|PDZ domain containing 9##DQ891390|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##DQ894565|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##J04973|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##BC003136|UQCRC2|7385|ubiquinol-cytochrome c reductase core protein II##NM_001164579|C16orf52|730094|chromosome 16 open reading frame 52##BC027604|C16orf52|730094|chromosome 16 open reading frame 52##BC053950|C16orf52|730094|chromosome 16 open reading frame 52##AK098260|VWA3A|146177|von Willebrand factor A domain containing 3A##AK128606|VWA3A|146177|von Willebrand factor A domain containing 3A##AK307544|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_173615|VWA3A|146177|von Willebrand factor A domain containing 3A##NM_013302|EEF2K|29904|eukaryotic elongation factor-2 kinase##AK308757|EEF2K|29904|eukaryotic elongation factor-2 kinase##BC032665|EEF2K|29904|eukaryotic elongation factor-2 kinase	0.0	
chr19	39368841	39368952	reg1037555.p1	3.584	+	TSC_hg19_v1_chr19_-_39342988 AK292115 NM_001005335 AK301062	-25920	-	AB587509 TSC_hg19_v1_chr19_-_39340622 AB044547 NM_001533	-28271	-	AK298384 TSC_hg19_v1_chr19_-_39340578	-28320	-	TSC_hg19_v1_chr19_-_39368901 AK127808 AK126119 AK298327 NM_001195833 NM_198445	14	-	TSC_hg19_v1_chr19_+_39390332 NM_001243116 AB362577	21405	+	TSC_hg19_v1_chr19_-_39390229 AK314492 AB009274 AF160214 AY030277 AF095714 AK025876 AK225824 AK054642 AK094810 BC003012 BC003547 AF083107 NM_012237 NM_001193286 NM_030593	21438	-	AK292115|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##NM_001005335|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AK301062|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AB044547|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##NM_001533|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AK298384|HNRNPL|3191|heterogeneous nuclear ribonucleoprotein L##AK127808|RINL|126432|Ras and Rab interactor-like##AK126119|RINL|126432|Ras and Rab interactor-like##AK298327|RINL|126432|Ras and Rab interactor-like##NM_001195833|RINL|126432|Ras and Rab interactor-like##NM_198445|RINL|126432|Ras and Rab interactor-like##NM_001243116|NFKBIB|4793|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta##AK314492|SIRT2|22933|sirtuin 2##AB009274|SIRT2|22933|sirtuin 2##AF160214|SIRT2|22933|sirtuin 2##AY030277|SIRT2|22933|sirtuin 2##AF095714|SIRT2|22933|sirtuin 2##AK025876|SIRT2|22933|sirtuin 2##AK225824|SIRT2|22933|sirtuin 2##AK054642|SIRT2|22933|sirtuin 2##AK094810|SIRT2|22933|sirtuin 2##BC003012|SIRT2|22933|sirtuin 2##BC003547|SIRT2|22933|sirtuin 2##AF083107|SIRT2|22933|sirtuin 2##NM_012237|SIRT2|22933|sirtuin 2##NM_001193286|SIRT2|22933|sirtuin 2##NM_030593|SIRT2|22933|sirtuin 2	0.0	
chr2	153298619	153298728	reg1040400.p2	3.584	+	BC113878 BC114438 TSC_hg19_v1_chr2_+_153191857 AB067489 BC167159 AB385514	-106700	+	TSC_hg19_v1_chr2_+_153191687 NM_052905	-107003	+	TSC_hg19_v1_chr2_-_153032266 AB463258 AM393419 CU688564 DQ892427 DQ895641 AK292265 AK292847 AK310863 AF042273 AF042274 AL133600 BC022277 BC028740 NM_005843	-266323	-	TSC_hg19_v1_chr2_-_153573924 U70667 AF049524 AF049528 BC000273 BC073138 BC011788 AF049523 AK298547 AK024810 BC029414 NM_017892	275247	-	TSC_hg19_v1_chr2_+_153574392 NM_152522 AK023109	275775	+	TSC_hg19_v1_chr2_+_153575123 AK315657	276442	+	BC113878|FMNL2|114793|formin-like 2##BC114438|FMNL2|114793|formin-like 2##AB067489|FMNL2|114793|formin-like 2##BC167159|FMNL2|114793|formin-like 2##NM_052905|FMNL2|114793|formin-like 2##AM393419|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ892427|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##DQ895641|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292265|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK292847|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AK310863|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042273|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AF042274|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##AL133600|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC022277|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##BC028740|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##NM_005843|STAM2|10254|signal transducing adaptor molecule (SH3 domain and ITAM motif) 2##U70667|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049524|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049528|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC000273|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC073138|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC011788|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AF049523|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK298547|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##AK024810|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##BC029414|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_017892|PRPF40A|55660|PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae)##NM_152522|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK023109|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AK315657|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6	0.478194	CTCF.p2:10:0.478
chr2	57776810	57776908	reg1041171.p1	3.584	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-1363950	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-1365093	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-1365654	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	496895	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	497129	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	691623	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.98567	CTCF.p2:-12:0.986
chr3	101655583	101655690	reg1034528.p1	3.584	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-87262	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-108676	+	AK289689 NM_001134456	-157351	+	AY090780 NM_175056 BC143817	498231	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	3429944	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	3430186	+	AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule	0.0	
chr4	154128855	154129007	reg1039870.p2	3.584	+	TSC_hg19_v1_chr4_+_154125594 AK308731 NM_015271 AB011089 AF220018	-3326	+	BC011052 NM_001130067	-54662	+	NM_033393 AB051514	-264741	+	TSC_hg19_v1_chr4_+_154178530 BC025417	49608	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	136856	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	136944	+	AK308731|TRIM2|23321|tripartite motif containing 2##NM_015271|TRIM2|23321|tripartite motif containing 2##AB011089|TRIM2|23321|tripartite motif containing 2##AF220018|TRIM2|23321|tripartite motif containing 2##BC011052|TRIM2|23321|tripartite motif containing 2##NM_001130067|TRIM2|23321|tripartite motif containing 2##NM_033393|FHDC1|85462|FH2 domain containing 1##AB051514|FHDC1|85462|FH2 domain containing 1##BC025417|TRIM2|23321|tripartite motif containing 2##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)	0.991963	CTCF.p2:-16:0.992
chr4	157215891	157216017	reg1043376.p2	3.584	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	-340906	-	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	-391077	+	AB528059 AJ252011 NM_017419	-428554	-	AB590688 BC051876 BC094746 AF260738 AK300480 AF244813 AK313817 BC041783 BC065490 TSC_hg19_v1_chr4_-_157892334 AM922296 AB033831	676263	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	676524	-	AF091434 NM_016205 TSC_hg19_v1_chr4_-_157892573	676605	-	BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O##NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##BC051876|PDGFC|56034|platelet derived growth factor C##BC094746|PDGFC|56034|platelet derived growth factor C##AF260738|PDGFC|56034|platelet derived growth factor C##AK300480|PDGFC|56034|platelet derived growth factor C##AF244813|PDGFC|56034|platelet derived growth factor C##AK313817|PDGFC|56034|platelet derived growth factor C##BC041783|PDGFC|56034|platelet derived growth factor C##AM922296|PDGFC|56034|platelet derived growth factor C##AB033831|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C##AF091434|PDGFC|56034|platelet derived growth factor C##NM_016205|PDGFC|56034|platelet derived growth factor C	0.999291	CTCF.p2:1:0.999
chr4	42406311	42406384	reg1029039.p2	3.584	+	NM_001080505	-6492	+	AB126828 AB126829 NM_001159547 NM_207406	-251453	-	TSC_hg19_v1_chr4_-_42154719 AK125953 AB463533	-251691	-	BC109317 AB013452 AF067820 BC109318 AB587324 TSC_hg19_v1_chr4_-_42659111 AB209687 BC020943 AK295616 NM_001105529 NM_006095	252741	-	AB528853 NM_001080476	488934	+	AK298831 HQ258617 TSC_hg19_v1_chr4_-_44450559 BC132743 BC136793	2044206	-	NM_001080505|SHISA3|152573|shisa homolog 3 (Xenopus laevis)##AB126828|BEND4|389206|BEN domain containing 4##AB126829|BEND4|389206|BEN domain containing 4##NM_001159547|BEND4|389206|BEN domain containing 4##NM_207406|BEND4|389206|BEN domain containing 4##AK125953|BEND4|389206|BEN domain containing 4##BC109317|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB013452|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AF067820|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC109318|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##AB209687|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##BC020943|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001105529|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_006095|ATP8A1|10396|ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1##NM_001080476|GRXCR1|389207|glutaredoxin, cysteine rich 1##AK298831|KCTD8|386617|potassium channel tetramerisation domain containing 8##HQ258617|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC132743|KCTD8|386617|potassium channel tetramerisation domain containing 8##BC136793|KCTD8|386617|potassium channel tetramerisation domain containing 8	0.018202	
chrX	40033655	40033736	reg1032818.p2	3.584	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	-77003	-	TSC_hg19_v1_chrX_+_38663536 AK001248	-1370155	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-1370235	+	BC114220 NM_001123383 NM_001123384	2886	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	406491	+	AF291814 TSC_hg19_v1_chrX_+_40440231 AK293510 BC084541 AK297007 AF109363	406547	+	AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF291814|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK293510|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##BC084541|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK297007|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF109363|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.0	
chrX	9320023	9320143	reg1038040.p2	3.584	+	BC120955 BC120956 NM_205849	-318981	-	BC113449 BC143805 NM_001171186 BC112022 AF494343 NM_174951	-550683	-	TSC_hg19_v1_chrX_-_8700193 BC137426 BC137427 M97252 NM_000216 S60085	-619876	-	TSC_hg19_v1_chrX_+_9431357 AK289409 NM_001139466 NM_001139467 NM_001139468 AK290962 BC032708	111264	+	TSC_hg19_v1_chrX_+_9433108 Y12781 BC052304 NM_005647	113151	+	Z48804 BC015657 BC068977 NM_000273	413877	-	BC120955|FAM9B|171483|family with sequence similarity 9, member B##BC120956|FAM9B|171483|family with sequence similarity 9, member B##NM_205849|FAM9B|171483|family with sequence similarity 9, member B##BC113449|FAM9A|171482|family with sequence similarity 9, member A##BC143805|FAM9A|171482|family with sequence similarity 9, member A##NM_001171186|FAM9A|171482|family with sequence similarity 9, member A##BC112022|FAM9A|171482|family with sequence similarity 9, member A##AF494343|FAM9A|171482|family with sequence similarity 9, member A##NM_174951|FAM9A|171482|family with sequence similarity 9, member A##BC137426|KAL1|3730|Kallmann syndrome 1 sequence##BC137427|KAL1|3730|Kallmann syndrome 1 sequence##M97252|KAL1|3730|Kallmann syndrome 1 sequence##NM_000216|KAL1|3730|Kallmann syndrome 1 sequence##S60085|KAL1|3730|Kallmann syndrome 1 sequence##AK289409|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139466|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139467|TBL1X|6907|transducin (beta)-like 1X-linked##NM_001139468|TBL1X|6907|transducin (beta)-like 1X-linked##AK290962|TBL1X|6907|transducin (beta)-like 1X-linked##BC032708|TBL1X|6907|transducin (beta)-like 1X-linked##Y12781|TBL1X|6907|transducin (beta)-like 1X-linked##BC052304|TBL1X|6907|transducin (beta)-like 1X-linked##NM_005647|TBL1X|6907|transducin (beta)-like 1X-linked##Z48804|GPR143|4935|G protein-coupled receptor 143##BC015657|GPR143|4935|G protein-coupled receptor 143##BC068977|GPR143|4935|G protein-coupled receptor 143##NM_000273|GPR143|4935|G protein-coupled receptor 143	0.629587	CTCF.p2:3:0.630
chr11	106990742	106990827	reg1033698.p2	3.583	+	BC085622 TSC_hg19_v1_chr11_-_106889260 BC130484 BC130488 BC144033 NM_000855 X63282 Z50053	-101696	-	NM_152433 NM_198439	-1042320	-	AF136978 AF151057 AF151838 AF302110 NM_015423 TSC_hg19_v1_chr11_+_105948388 BC016728 AK312529 BC015470 AK293362 AB463408 CU677695 DQ891342 DQ894524	-1042419	+	AK293001 TSC_hg19_v1_chr11_-_107328552 BX649022 BX647832 BC107418 BC070142 BX648704 AK126881 NM_152434	337755	-	AK293603 TSC_hg19_v1_chr11_-_107436464 BC015183 AK304413 AB218768 AK095523 NM_138775	445660	-	TSC_hg19_v1_chr11_+_107461813 AK297351 NM_001130037 NM_018712	471027	+	BC130484|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC130488|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC144033|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_000855|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##X63282|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##Z50053|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_152433|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##NM_198439|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##AF136978|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151057|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151838|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF302110|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##NM_015423|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC016728|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK312529|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC015470|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK293362|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ891342|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ894524|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK293001|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX649022|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX647832|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC107418|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC070142|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX648704|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK126881|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##NM_152434|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK293603|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##BC015183|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK304413|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AB218768|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK095523|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##NM_138775|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1	0.0	
chr11	132010072	132010198	reg1036216.p2	3.583	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	-228796	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	-229511	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	-769666	+	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	802879	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	803470	-	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	1392179	-	EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like	0.0	
chr1	198629969	198630102	reg1037624.p1	3.583	+	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-21705	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-21810	+	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	-21862	+	TSC_hg19_v1_chr1_-_198906559 EF413001	276512	-	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	1366834	+	AK316513 TSC_hg19_v1_chr1_+_200011716	1381689	+	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	0.0	
chr12	26425061	26425139	reg1033811.p2	3.583	+	AK304667 NM_005086 AK314353 AL136756 BC062299 AB528239 AM392675 AM392714 AF016028 DQ897666 EU433933 X89105	-76515	+	NM_001135823 AK092925 TSC_hg19_v1_chr12_+_26348312	-76809	+	TSC_hg19_v1_chr12_-_26277832 AY665467 AK303677 AB044088 BC025968 NM_030762	-147179	-	TSC_hg19_v1_chr12_-_26986127 AK307712 D26350 NM_002223	560980	-	TSC_hg19_v1_chr12_-_27090914 AK001492 BC008368 AK225336 AK297948 AK001499 BC003081	665809	-	TSC_hg19_v1_chr12_-_27091213 NM_018164	666130	-	AK304667|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_005086|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK314353|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AL136756|SSPN|8082|sarcospan (Kras oncogene-associated gene)##BC062299|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392675|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AM392714|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AF016028|SSPN|8082|sarcospan (Kras oncogene-associated gene)##DQ897666|SSPN|8082|sarcospan (Kras oncogene-associated gene)##EU433933|SSPN|8082|sarcospan (Kras oncogene-associated gene)##X89105|SSPN|8082|sarcospan (Kras oncogene-associated gene)##NM_001135823|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AK092925|SSPN|8082|sarcospan (Kras oncogene-associated gene)##AY665467|BHLHE41|79365|basic helix-loop-helix family, member e41##AK303677|BHLHE41|79365|basic helix-loop-helix family, member e41##AB044088|BHLHE41|79365|basic helix-loop-helix family, member e41##BC025968|BHLHE41|79365|basic helix-loop-helix family, member e41##NM_030762|BHLHE41|79365|basic helix-loop-helix family, member e41##AK307712|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##D26350|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##NM_002223|ITPR2|3709|inositol 1,4,5-trisphosphate receptor, type 2##AK001492|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC008368|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK225336|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK297948|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##AK001499|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##BC003081|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)##NM_018164|ASUN|55726|asunder, spermatogenesis regulator homolog (Drosphila)	0.0	
chr17	46188608	46188730	reg1038929.p2	3.583	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	-3517	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	-3684	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-9848	-	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	318869	-	TSC_hg19_v1_chr17_-_46507604 BC039040	318948	-	BC096191 BC096192 BC096193 BC099633 NM_002144 X16666	419602	-	BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1##BC039040|SKAP1|8631|src kinase associated phosphoprotein 1##BC096191|HOXB1|3211|homeobox B1##BC096192|HOXB1|3211|homeobox B1##BC096193|HOXB1|3211|homeobox B1##BC099633|HOXB1|3211|homeobox B1##NM_002144|HOXB1|3211|homeobox B1##X16666|HOXB1|3211|homeobox B1	0.320717	CTCF.p2:21:0.321
chr17	71653765	71653861	reg1043141.p1	3.583	+	NM_001144952	-13587	-	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-345673	-	BC157870 NM_001129885	-395795	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	546002	+	TSC_hg19_v1_chr17_+_72199849 BC000603	546040	+	TSC_hg19_v1_chr17_+_72209709 NM_032646 BC107492 BC107602 AK315163 AF319952 BC005168	555856	+	NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38##NM_032646|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107492|TTYH2|94015|tweety homolog 2 (Drosophila)##BC107602|TTYH2|94015|tweety homolog 2 (Drosophila)##AK315163|TTYH2|94015|tweety homolog 2 (Drosophila)##AF319952|TTYH2|94015|tweety homolog 2 (Drosophila)##BC005168|TTYH2|94015|tweety homolog 2 (Drosophila)	0.052593	
chr17	73514300	73514366	reg1035724.p1	3.583	+	TSC_hg19_v1_chr17_+_73512608 NM_207346 AK094466 BC045551 BC053643 BC047793 CU690512	-1719	+	BC066643 NM_020753 TSC_hg19_v1_chr17_-_73511632	-2694	-	TSC_hg19_v1_chr17_-_73511556 AF451976 BC032359	-2798	-	TSC_hg19_v1_chr17_+_73521798 NM_001015002 NM_001031803 NM_004524 BC010879 BC006503 X87342 BC067840 BC064994 BC080595	7463	+	TSC_hg19_v1_chr17_+_73553885 AK126687	39552	+	AF418286 AF418287 AF418288 AF418289 AF418290 AF418291 TSC_hg19_v1_chr17_+_73584199	69842	+	NM_207346|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##AK094466|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC045551|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC053643|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC047793|TSEN54|283989|tRNA splicing endonuclease 54 homolog (S. cerevisiae)##BC066643|CASKIN2|57513|CASK interacting protein 2##NM_020753|CASKIN2|57513|CASK interacting protein 2##AF451976|CASKIN2|57513|CASK interacting protein 2##BC032359|CASKIN2|57513|CASK interacting protein 2##NM_001015002|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_001031803|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##NM_004524|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC010879|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC006503|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##X87342|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC067840|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##BC064994|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##AK126687|LLGL2|3993|lethal giant larvae homolog 2 (Drosophila)##AF418286|MYO15B|80022|myosin XVB pseudogene##AF418287|MYO15B|80022|myosin XVB pseudogene##AF418288|MYO15B|80022|myosin XVB pseudogene##AF418289|MYO15B|80022|myosin XVB pseudogene##AF418290|MYO15B|80022|myosin XVB pseudogene##AF418291|MYO15B|80022|myosin XVB pseudogene	0.0	
chr18	24543420	24543508	reg1028757.p2	3.583	+	AB128929 AB528067 CU692534 BC022286 D63412 AB209156 AK295069 U63622 TSC_hg19_v1_chr18_-_24445707 NM_001650 AK222684 HQ901095	-97748	-	U63623 NM_004028	-100910	-	AF542549 NM_198991	-323157	-	CU693056 AF332472 AK093349 AX748069 NM_001243848	179415	-	AF239821 BC025764 TSC_hg19_v1_chr18_-_24765254 AY358488 NM_031422	221769	-	TSC_hg19_v1_chr18_-_25757095 AB384981 EU832318 EU832403 X54315 BC036470	1213573	-	AB128929|AQP4|361|aquaporin 4##BC022286|AQP4|361|aquaporin 4##D63412|AQP4|361|aquaporin 4##AB209156|AQP4|361|aquaporin 4##AK295069|AQP4|361|aquaporin 4##U63622|AQP4|361|aquaporin 4##NM_001650|AQP4|361|aquaporin 4##AK222684|AQP4|361|aquaporin 4##HQ901095|AQP4|361|aquaporin 4##U63623|AQP4|361|aquaporin 4##NM_004028|AQP4|361|aquaporin 4##AF542549|KCTD1|284252|potassium channel tetramerisation domain containing 1##NM_198991|KCTD1|284252|potassium channel tetramerisation domain containing 1##AF332472|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AK093349|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_001243848|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AF239821|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##BC025764|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##AY358488|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##NM_031422|CHST9|83539|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9##EU832318|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##EU832403|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##X54315|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)##BC036470|CDH2|1000|cadherin 2, type 1, N-cadherin (neuronal)	0.0	
chr19	11959636	11959702	reg1044292.p2	3.583	+	TSC_hg19_v1_chr19_+_11925098 AK095252 NM_152357 BC035760	-34563	+	AK297479 NM_152356 AK096593	-50290	+	NM_152355 TSC_hg19_v1_chr19_+_11877884 AK095956	-81809	+	AL833935 NM_152262	17174	+	TSC_hg19_v1_chr19_+_11998643 BC051309 NM_021915 EU446913	39004	+	TSC_hg19_v1_chr19_+_12035889 AK299182 AK308305 AL136732 NM_144566 BC144406 BC136777	76249	+	AK095252|ZNF440|126070|zinc finger protein 440##NM_152357|ZNF440|126070|zinc finger protein 440##BC035760|ZNF440|126070|zinc finger protein 440##AK297479|ZNF491|126069|zinc finger protein 491##NM_152356|ZNF491|126069|zinc finger protein 491##AK096593|ZNF491|126069|zinc finger protein 491##NM_152355|ZNF441|126068|zinc finger protein 441##AK095956|ZNF441|126068|zinc finger protein 441##AL833935|ZNF439|90594|zinc finger protein 439##NM_152262|ZNF439|90594|zinc finger protein 439##BC051309|ZNF69|7620|zinc finger protein 69##NM_021915|ZNF69|7620|zinc finger protein 69##EU446913|ZNF69|7620|zinc finger protein 69##AK299182|ZNF763|284390|zinc finger protein 763##AK308305|ZNF700|90592|zinc finger protein 700##AL136732|ZNF700|90592|zinc finger protein 700##NM_144566|ZNF700|90592|zinc finger protein 700##BC144406|ZNF700|90592|zinc finger protein 700##BC136777|ZNF700|90592|zinc finger protein 700	0.0	
chr22	38303183	38303249	reg1039266.p1	3.583	+	TSC_hg19_v1_chr22_+_38302345 AJ496196 CR456437 AB463117 BC142605 BC143050 CU013036 CU013324 AL834373	-818	+	TSC_hg19_v1_chr22_+_38302165 NM_033386	-1087	+	AL357455 CU674548 CU688616 TSC_hg19_v1_chr22_+_38245452 DQ891842 DQ893595 DQ895030 EU176311 AK093540 AX748192	-57748	+	CR456440 BC031998 AK057349 NM_032561 NM_001207062	46388	-	TSC_hg19_v1_chr22_+_38349705 NM_021974 BC003582 AK094034 AK311128 AK311831 AX748424 CR456546 CU013146 CU013434 AB463187 CR457021	46516	+	BT020029 CR536571 AB489148 CU013183 CU013471 CU678224 DQ893172 DQ896471 TSC_hg19_v1_chr22_-_38379842	76606	-	AJ496196|MICALL1|85377|MICAL-like 1##CR456437|MICALL1|85377|MICAL-like 1##BC142605|MICALL1|85377|MICAL-like 1##BC143050|MICALL1|85377|MICAL-like 1##AL834373|MICALL1|85377|MICAL-like 1##NM_033386|MICALL1|85377|MICAL-like 1##AL357455|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ891842|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ893595|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ895030|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##EU176311|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##AK093540|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##CR456440|C22orf23|84645|chromosome 22 open reading frame 23##BC031998|C22orf23|84645|chromosome 22 open reading frame 23##AK057349|C22orf23|84645|chromosome 22 open reading frame 23##NM_032561|C22orf23|84645|chromosome 22 open reading frame 23##NM_001207062|C22orf23|84645|chromosome 22 open reading frame 23##NM_021974|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##BC003582|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK094034|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK311128|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK311831|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CR456546|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CU013146|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CU013434|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CR457021|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##BT020029|SOX10|6663|SRY (sex determining region Y)-box 10##CR536571|SOX10|6663|SRY (sex determining region Y)-box 10##CU013183|SOX10|6663|SRY (sex determining region Y)-box 10##CU013471|SOX10|6663|SRY (sex determining region Y)-box 10##DQ893172|SOX10|6663|SRY (sex determining region Y)-box 10##DQ896471|SOX10|6663|SRY (sex determining region Y)-box 10	0.0	
chr3	183100507	183100687	reg1000409.p2	3.583	+	TSC_hg19_v1_chr3_+_182971608 AK091474 AX747008	-128991	+	AB209517 TSC_hg19_v1_chr3_+_182971343	-129319	+	TSC_hg19_v1_chr3_+_182970969 NM_032047 AK074424	-129649	+	NM_015078 BC064632 AK124500 AK310962	45342	-	TSC_hg19_v1_chr3_+_183165436 AK057000	64833	+	AF441792 CU689348 DQ894788 EU176275 TSC_hg19_v1_chr3_-_183273495 AK097125 AK314473 BX648370 BC032348 NM_130446	172855	-	AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AB209517|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##NM_032047|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AK074424|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK057000|LOC100505687|100505687|uncharacterized LOC100505687##AF441792|KLHL6|89857|kelch-like 6 (Drosophila)##DQ894788|KLHL6|89857|kelch-like 6 (Drosophila)##EU176275|KLHL6|89857|kelch-like 6 (Drosophila)##AK097125|KLHL6|89857|kelch-like 6 (Drosophila)##AK314473|KLHL6|89857|kelch-like 6 (Drosophila)##BX648370|KLHL6|89857|kelch-like 6 (Drosophila)##BC032348|KLHL6|89857|kelch-like 6 (Drosophila)##NM_130446|KLHL6|89857|kelch-like 6 (Drosophila)	0.0	
chr4	1026391	1026483	reg1039272.p1	3.583	+	AJ277437 NM_021923 AB385230 DQ892417 DQ895631 AK225486	-20172	+	AF312678 AY358303 NM_001004356 AF279689 NM_001004358	-20753	+	TSC_hg19_v1_chr4_+_1005410 AK172829	-21034	+	BC101258 BC101259 BC101260 BC101261 BC036250 AK310043 BC050356 AK096160 NM_001131034 NM_001193318 NM_194439	80895	-	TSC_hg19_v1_chr4_-_1166372 AK130164	139932	-	TSC_hg19_v1_chr4_-_1166378 BC002707	139951	-	AJ277437|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_021923|FGFRL1|53834|fibroblast growth factor receptor-like 1##DQ892417|FGFRL1|53834|fibroblast growth factor receptor-like 1##DQ895631|FGFRL1|53834|fibroblast growth factor receptor-like 1##AK225486|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF312678|FGFRL1|53834|fibroblast growth factor receptor-like 1##AY358303|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004356|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF279689|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004358|FGFRL1|53834|fibroblast growth factor receptor-like 1##AK172829|FGFRL1|53834|fibroblast growth factor receptor-like 1##BC101258|RNF212|285498|ring finger protein 212##BC101259|RNF212|285498|ring finger protein 212##BC101260|RNF212|285498|ring finger protein 212##BC101261|RNF212|285498|ring finger protein 212##BC036250|RNF212|285498|ring finger protein 212##AK310043|RNF212|285498|ring finger protein 212##BC050356|RNF212|285498|ring finger protein 212##AK096160|RNF212|285498|ring finger protein 212##NM_001131034|RNF212|285498|ring finger protein 212##NM_001193318|RNF212|285498|ring finger protein 212##NM_194439|RNF212|285498|ring finger protein 212##AK130164|SPON2|10417|spondin 2, extracellular matrix protein##BC002707|SPON2|10417|spondin 2, extracellular matrix protein	0.64859	CTCF.p2:16:0.634
chr5	35436692	35436796	reg1031809.p2	3.583	+	NM_000949	-205922	-	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	-206167	-	NM_001204314 NM_001204315 NM_001204316 NM_001204317 NM_001204318	-318521	-	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	181265	+	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	420289	+	NM_001042625 BC017586 NM_144647	502064	-	NM_000949|PRLR|5618|prolactin receptor##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##NM_001204314|PRLR|5618|prolactin receptor##NM_001204315|PRLR|5618|prolactin receptor##NM_001204316|PRLR|5618|prolactin receptor##NM_001204317|PRLR|5618|prolactin receptor##NM_001204318|PRLR|5618|prolactin receptor##BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like	0.189282	
chr6	36349760	36349921	reg1035549.p1	3.583	+	BC140873 BX648558 NM_001010903 TSC_hg19_v1_chr6_-_36304663	-45215	-	AM182887 FJ457781 NM_001145717	-111604	+	AK096074 NM_173676 BC103905 BC103906 BC103907 NM_001145716	-138879	+	AF175387 AF218365 AF116508 AF116509 AF116510 AF218235 AF218366 BC035853 AK301011 AF147782 AK223424 AJ276205 AK026144 NM_001207038 AK303829 NM_001207035 NM_001207036 NM_001207037 NM_001207039 NM_001207040 NM_001207041 NM_016135	5619	-	BC031105 NM_152990	60825	-	AY305862 NM_173562 TSC_hg19_v1_chr6_+_36410797 AK295717 AK316456	60830	+	BC140873|C6orf222|389384|chromosome 6 open reading frame 222##BX648558|C6orf222|389384|chromosome 6 open reading frame 222##NM_001010903|C6orf222|389384|chromosome 6 open reading frame 222##AM182887|PNPLA1|285848|patatin-like phospholipase domain containing 1##FJ457781|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145717|PNPLA1|285848|patatin-like phospholipase domain containing 1##AK096074|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_173676|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103905|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103906|PNPLA1|285848|patatin-like phospholipase domain containing 1##BC103907|PNPLA1|285848|patatin-like phospholipase domain containing 1##NM_001145716|PNPLA1|285848|patatin-like phospholipase domain containing 1##AF175387|ETV7|51513|ets variant 7##AF218365|ETV7|51513|ets variant 7##AF116508|ETV7|51513|ets variant 7##AF116509|ETV7|51513|ets variant 7##AF116510|ETV7|51513|ets variant 7##AF218235|ETV7|51513|ets variant 7##AF218366|ETV7|51513|ets variant 7##BC035853|ETV7|51513|ets variant 7##AK301011|ETV7|51513|ets variant 7##AF147782|ETV7|51513|ets variant 7##AK223424|ETV7|51513|ets variant 7##AJ276205|ETV7|51513|ets variant 7##AK026144|ETV7|51513|ets variant 7##NM_001207038|ETV7|51513|ets variant 7##AK303829|ETV7|51513|ets variant 7##NM_001207035|ETV7|51513|ets variant 7##NM_001207036|ETV7|51513|ets variant 7##NM_001207037|ETV7|51513|ets variant 7##NM_001207039|ETV7|51513|ets variant 7##NM_001207040|ETV7|51513|ets variant 7##NM_001207041|ETV7|51513|ets variant 7##NM_016135|ETV7|51513|ets variant 7##BC031105|PXT1|222659|peroxisomal, testis specific 1##NM_152990|PXT1|222659|peroxisomal, testis specific 1##AY305862|KCTD20|222658|potassium channel tetramerisation domain containing 20##NM_173562|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK295717|KCTD20|222658|potassium channel tetramerisation domain containing 20##AK316456|KCTD20|222658|potassium channel tetramerisation domain containing 20	0.068912	
chr6	89175642	89175749	reg1038132.p2	3.583	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-299929	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-320659	-	BC029488 NM_030960 AF203447	-418165	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	497496	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	497613	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	497652	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.411776	CTCF.p2:0:0.259
chr7	104585779	104585878	reg1040362.p2	3.583	+	TSC_hg19_v1_chr7_-_104567089 BC050337	-18738	-	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-616610	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-737397	-	TSC_hg19_v1_chr7_-_104653491 AK124046	67654	-	TSC_hg19_v1_chr7_-_104654062 AK094372	68246	-	TSC_hg19_v1_chr7_-_104654534 BC017007 AK123476	68674	-	BC050337|LOC723809|723809|uncharacterized LOC723809##AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545##BC017007|LOC100216545|100216545|uncharacterized LOC100216545##AK123476|LOC100216545|100216545|uncharacterized LOC100216545	0.0	
chr8	129076338	129076455	reg1036579.p1	3.583	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-269613	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-327906	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-328071	+	AB042405 NM_031415	1722737	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1875519	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1875610	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr8	67379231	67379354	reg1034031.p1	3.583	+	NM_144650 AY033237 AK056992 AK300881 BC047492 BC064634 AK293530 AK300243 AK294114 BC110290	-34560	+	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	-37986	+	BC002599 BC011031 AK075431 NM_000756	-288525	-	NM_152765	26198	+	BC032233 NM_001080416 NM_001144755 TSC_hg19_v1_chr8_-_67525502	146182	-	AM392649 AM393766 TSC_hg19_v1_chr8_-_67579266	199939	-	NM_144650|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AY033237|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK056992|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300881|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC047492|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC064634|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK293530|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300243|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK294114|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC110290|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone##NM_152765|C8orf46|254778|chromosome 8 open reading frame 46##BC032233|LOC645895|645895|uncharacterized LOC645895##NM_001080416|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1##NM_001144755|MYBL1|4603|v-myb myeloblastosis viral oncogene homolog (avian)-like 1##AM392649|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1##AM393766|VCPIP1|80124|valosin containing protein (p97)/p47 complex interacting protein 1	0.297127	CTCF.p2:10:0.297
chr1	174768787	174768903	reg1043402.p1	3.582	+	BC095532 NM_005684 CU688296 CU688298 BC067456 BC067457 BC067458 BC067459 BC067460 BC069460 HQ995526	-351615	+	AK095838 TSC_hg19_v1_chr1_+_174128676 AL157958	-640153	+	BC041888 NM_014857 TSC_hg19_v1_chr1_+_174128608	-640245	+	AB007940 NM_001243765	189	+	NM_001243763 AL049701	74714	+	NM_001035230 BC012094	75824	+	BC095532|GPR52|9293|G protein-coupled receptor 52##NM_005684|GPR52|9293|G protein-coupled receptor 52##BC067456|GPR52|9293|G protein-coupled receptor 52##BC067457|GPR52|9293|G protein-coupled receptor 52##BC067458|GPR52|9293|G protein-coupled receptor 52##BC067459|GPR52|9293|G protein-coupled receptor 52##BC067460|GPR52|9293|G protein-coupled receptor 52##BC069460|GPR52|9293|G protein-coupled receptor 52##HQ995526|GPR52|9293|G protein-coupled receptor 52##AK095838|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL157958|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC041888|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_014857|RABGAP1L|9910|RAB GTPase activating protein 1-like##AB007940|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243765|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001243763|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL049701|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_001035230|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC012094|RABGAP1L|9910|RAB GTPase activating protein 1-like	0.0	
chr1	213151035	213151167	reg1034239.p1	3.582	+	AK302675 TSC_hg19_v1_chr1_+_213124038	-27078	+	TSC_hg19_v1_chr1_+_213123945 AK290973 NM_001136474 NM_001136475 NM_024749 AK022567 AK096605 BC053836 BC051856 BC028194	-27184	+	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	-119421	+	TSC_hg19_v1_chr1_-_213188830 AK299208	37710	-	TSC_hg19_v1_chr1_-_213189125 AK294479 AK311276 AK299365 BC047469 AK295116 AF510741 AL079275 NM_144567	38026	-	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	73486	+	AK302675|VASH2|79805|vasohibin 2##AK290973|VASH2|79805|vasohibin 2##NM_001136474|VASH2|79805|vasohibin 2##NM_001136475|VASH2|79805|vasohibin 2##NM_024749|VASH2|79805|vasohibin 2##AK022567|VASH2|79805|vasohibin 2##AK096605|VASH2|79805|vasohibin 2##BC053836|VASH2|79805|vasohibin 2##BC051856|VASH2|79805|vasohibin 2##BC028194|VASH2|79805|vasohibin 2##AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK299208|ANGEL2|90806|angel homolog 2 (Drosophila)##AK294479|ANGEL2|90806|angel homolog 2 (Drosophila)##AK311276|ANGEL2|90806|angel homolog 2 (Drosophila)##AK299365|ANGEL2|90806|angel homolog 2 (Drosophila)##BC047469|ANGEL2|90806|angel homolog 2 (Drosophila)##AK295116|ANGEL2|90806|angel homolog 2 (Drosophila)##AF510741|ANGEL2|90806|angel homolog 2 (Drosophila)##AL079275|ANGEL2|90806|angel homolog 2 (Drosophila)##NM_144567|ANGEL2|90806|angel homolog 2 (Drosophila)##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1	0.0	
chr1	224087978	224088086	reg1036331.p1	3.582	+	NM_001031685 NM_005426 TSC_hg19_v1_chr1_-_224033682	-54338	-	TSC_hg19_v1_chr1_-_224033620 BC046150 AJ318888 U58334 BC058918	-54409	-	AB384887 TSC_hg19_v1_chr1_-_224033497 AK294432	-54569	-	NM_001136115 NM_015176 TSC_hg19_v1_chr1_+_224301812 AK001628 AK307892 BC031576 AK303381 CU689186	213778	+	TSC_hg19_v1_chr1_+_224370925 BC000961 NM_003676	282890	+	TSC_hg19_v1_chr1_+_224370941 AK308232 AF466375 AY423730 AF002668 CU674476	282955	+	NM_001031685|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_005426|TP53BP2|7159|tumor protein p53 binding protein, 2##BC046150|TP53BP2|7159|tumor protein p53 binding protein, 2##AJ318888|TP53BP2|7159|tumor protein p53 binding protein, 2##U58334|TP53BP2|7159|tumor protein p53 binding protein, 2##BC058918|TP53BP2|7159|tumor protein p53 binding protein, 2##AK294432|TP53BP2|7159|tumor protein p53 binding protein, 2##NM_001136115|FBXO28|23219|F-box protein 28##NM_015176|FBXO28|23219|F-box protein 28##AK001628|FBXO28|23219|F-box protein 28##AK307892|FBXO28|23219|F-box protein 28##BC031576|FBXO28|23219|F-box protein 28##AK303381|FBXO28|23219|F-box protein 28##BC000961|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##NM_003676|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AK308232|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF466375|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AY423730|DEGS1|8560|delta(4)-desaturase, sphingolipid 1##AF002668|DEGS1|8560|delta(4)-desaturase, sphingolipid 1	0.912856	CTCF.p2:11:0.913
chr15	25773303	25773483	reg1036733.p2	3.582	+	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	-89215	-	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	-89292	-	L07557 NM_130838	-122744	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	334960	-	AB051358 TSC_hg19_v1_chr15_-_26108932	335507	-	AK295167 NM_001191321 TSC_hg19_v1_chr15_-_26874238 BC038837	1100887	-	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##AB051358|ATP10A|57194|ATPase, class V, type 10A##AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	0.0	
chr16	49609463	49609564	reg1042706.p1	3.582	+	BC021181 BC021718 NM_144602 CU676858	-201685	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-293779	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	-294013	-	NM_015069	251404	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	449627	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	490380	+	BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##NM_015069|ZNF423|23090|zinc finger protein 423##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3	0.0	
chr18	11293800	11293980	reg1033254.p1	3.582	+	NM_022068	-145130	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-767793	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-767834	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	395322	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	457625	+	L10665 TSC_hg19_v1_chr18_+_11752245	458325	+	NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.0	
chr18	12737419	12737532	reg1039054.p2	3.582	+	TSC_hg19_v1_chr18_+_12703040 NM_020232 AK225882 AF168712 AK057005 BC013356 CU680576	-34439	+	TSC_hg19_v1_chr18_-_12702776 AK298223	-34711	-	TSC_hg19_v1_chr18_-_12702689 AK022604 BC033026 AL833727 BC026307 NM_024899 AK303117	-34800	-	CU678897 AB590517 BC008244 TSC_hg19_v1_chr18_-_12884237 M25393 AK225706 AK290649 AK292570 BC016727 NM_001207013 NM_002828 NM_080422 NM_080423	146761	-	TSC_hg19_v1_chr18_+_12947986 NM_001013437 NM_031216	210510	+	TSC_hg19_v1_chr18_+_12948009 AK314403	210531	+	NM_020232|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK225882|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AF168712|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK057005|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##BC013356|PSMG2|56984|proteasome (prosome, macropain) assembly chaperone 2##AK298223|CEP76|79959|centrosomal protein 76kDa##AK022604|CEP76|79959|centrosomal protein 76kDa##BC033026|CEP76|79959|centrosomal protein 76kDa##AL833727|CEP76|79959|centrosomal protein 76kDa##BC026307|CEP76|79959|centrosomal protein 76kDa##NM_024899|CEP76|79959|centrosomal protein 76kDa##AK303117|CEP76|79959|centrosomal protein 76kDa##BC008244|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##M25393|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK225706|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK290649|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##AK292570|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##BC016727|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_001207013|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_002828|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_080422|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_080423|PTPN2|5771|protein tyrosine phosphatase, non-receptor type 2##NM_001013437|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_031216|SEH1L|81929|SEH1-like (S. cerevisiae)##AK314403|SEH1L|81929|SEH1-like (S. cerevisiae)	0.728215	CTCF.p2:-22:0.728
chr18	29671637	29671760	reg1040630.p1	3.582	+	TSC_hg19_v1_chr18_+_29598794 BC012021 CU680164	-72892	+	AK000463 AK225518 NM_017831	-73254	+	TSC_hg19_v1_chr18_-_29523092 NM_014939 AL136749	-148590	-	NM_016271 TSC_hg19_v1_chr18_+_29671843	138	+	TSC_hg19_v1_chr18_+_29671959 AK315761 AF162680 BC018107	352	+	NM_001191324 NM_198128 TSC_hg19_v1_chr18_+_29672650 AK023579 AB528421 DQ890744 DQ893914 CU676180 BT006878 CR457150	955	+	BC012021|RNF125|54941|ring finger protein 125##AK000463|RNF125|54941|ring finger protein 125##AK225518|RNF125|54941|ring finger protein 125##NM_017831|RNF125|54941|ring finger protein 125##NM_014939|TRAPPC8|22878|trafficking protein particle complex 8##AL136749|TRAPPC8|22878|trafficking protein particle complex 8##NM_016271|RNF138|51444|ring finger protein 138##AK315761|RNF138|51444|ring finger protein 138##AF162680|RNF138|51444|ring finger protein 138##BC018107|RNF138|51444|ring finger protein 138##NM_001191324|RNF138|51444|ring finger protein 138##NM_198128|RNF138|51444|ring finger protein 138##AK023579|RNF138|51444|ring finger protein 138##DQ890744|RNF138|51444|ring finger protein 138##DQ893914|RNF138|51444|ring finger protein 138##BT006878|RNF138|51444|ring finger protein 138##CR457150|RNF138|51444|ring finger protein 138	0.018253	
chr19	6590598	6590747	reg1026270.p1	3.582	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	-59646	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-88355	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-108889	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	360	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	434	-	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	486	-	NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule	0.0	
chr21	45640502	45640569	reg1039573.p2	3.582	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-86974	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-87030	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-113236	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	20231	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	20322	-	AF194032 NM_013369 NM_175867	41563	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr3	183272294	183272362	reg1035550.p1	3.582	+	TSC_hg19_v1_chr3_+_183165436 AK057000	-106898	+	NM_015078 BC064632 AK124500 AK310962	-126389	-	TSC_hg19_v1_chr3_+_182971608 AK091474 AX747008	-300722	+	AF441792 CU689348 DQ894788 EU176275 TSC_hg19_v1_chr3_-_183273495 AK097125 AK314473 BX648370 BC032348 NM_130446	1124	-	BC142993 TSC_hg19_v1_chr3_+_183353410 AK026326 AY422472 BX648466 BX648812 NM_017644	81072	+	TSC_hg19_v1_chr3_+_183415597 AB033023 BC150273 NM_018023	143294	+	AK057000|LOC100505687|100505687|uncharacterized LOC100505687##NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK091474|B3GNT5|84002|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5##AF441792|KLHL6|89857|kelch-like 6 (Drosophila)##DQ894788|KLHL6|89857|kelch-like 6 (Drosophila)##EU176275|KLHL6|89857|kelch-like 6 (Drosophila)##AK097125|KLHL6|89857|kelch-like 6 (Drosophila)##AK314473|KLHL6|89857|kelch-like 6 (Drosophila)##BX648370|KLHL6|89857|kelch-like 6 (Drosophila)##BC032348|KLHL6|89857|kelch-like 6 (Drosophila)##NM_130446|KLHL6|89857|kelch-like 6 (Drosophila)##BC142993|KLHL24|54800|kelch-like 24 (Drosophila)##AK026326|KLHL24|54800|kelch-like 24 (Drosophila)##AY422472|KLHL24|54800|kelch-like 24 (Drosophila)##BX648466|KLHL24|54800|kelch-like 24 (Drosophila)##BX648812|KLHL24|54800|kelch-like 24 (Drosophila)##NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)##AB033023|YEATS2|55689|YEATS domain containing 2##BC150273|YEATS2|55689|YEATS domain containing 2##NM_018023|YEATS2|55689|YEATS domain containing 2	0.0	
chr3	41244641	41244750	reg1035858.p1	3.582	+	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	-3671	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	-3746	+	TSC_hg19_v1_chr3_+_40566471 BC101619 BC113415 CR749268	-678195	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	758864	-	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	888138	+	TSC_hg19_v1_chr3_+_42190749 AK294221	946053	+	AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC101619|ZNF621|285268|zinc finger protein 621##BC113415|ZNF621|285268|zinc finger protein 621##CR749268|ZNF621|285268|zinc finger protein 621##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1	0.946364	CTCF.p2:-20:0.946
chr7	81314545	81314654	reg1032499.p2	3.582	+	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-765925	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-766165	-	HM217020 HM217021 HM217022 HM217023 HM217024 HM217025 HM217026 AB590184 CU678951 DQ893062 DQ896314 TSC_hg19_v1_chr7_+_80276126	-1038552	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	84775	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	758247	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	758481	-	AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##HM217020|CD36|948|CD36 molecule (thrombospondin receptor)##HM217021|CD36|948|CD36 molecule (thrombospondin receptor)##HM217022|CD36|948|CD36 molecule (thrombospondin receptor)##HM217023|CD36|948|CD36 molecule (thrombospondin receptor)##HM217024|CD36|948|CD36 molecule (thrombospondin receptor)##HM217025|CD36|948|CD36 molecule (thrombospondin receptor)##HM217026|CD36|948|CD36 molecule (thrombospondin receptor)##DQ893062|CD36|948|CD36 molecule (thrombospondin receptor)##DQ896314|CD36|948|CD36 molecule (thrombospondin receptor)##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1	0.0	
chr8	33412548	33412656	reg1035929.p2	3.582	+	AK026916 TSC_hg19_v1_chr8_-_33370644 BX648410 BC007387 BC066935 NM_025115 NM_001102401	-41975	-	NM_032509 TSC_hg19_v1_chr8_+_33342703 AK314491 AK225476 AK027469 BC015965 AF251062 BC039740 BC028230 BC050528 CU690708	-69898	+	AK098505 AK297132 TSC_hg19_v1_chr8_-_33330636 AK303231 AJ512465 AJ535838 AJ535839 AK292993 AJ582015 NM_032664	-81956	-	AK022588 NM_024787 TSC_hg19_v1_chr8_-_33424647	12061	-	TSC_hg19_v1_chr8_-_33457295 BC067804	44685	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	44857	-	AK026916|TTI2|80185|TELO2 interacting protein 2##BX648410|TTI2|80185|TELO2 interacting protein 2##BC007387|TTI2|80185|TELO2 interacting protein 2##BC066935|TTI2|80185|TELO2 interacting protein 2##NM_025115|TTI2|80185|TELO2 interacting protein 2##NM_001102401|TTI2|80185|TELO2 interacting protein 2##NM_032509|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK314491|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK225476|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK027469|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC015965|MAK16|84549|MAK16 homolog (S. cerevisiae)##AF251062|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC039740|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC028230|MAK16|84549|MAK16 homolog (S. cerevisiae)##BC050528|MAK16|84549|MAK16 homolog (S. cerevisiae)##AK098505|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK297132|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK303231|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ512465|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535838|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ535839|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK292993|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AJ582015|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##NM_032664|FUT10|84750|fucosyltransferase 10 (alpha (1,3) fucosyltransferase)##AK022588|RNF122|79845|ring finger protein 122##NM_024787|RNF122|79845|ring finger protein 122##BC067804|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)	0.0	
chrX	12133652	12133750	reg1040335.p1	3.582	+	NM_006800 AK025642	-355954	+	NM_001193270 AK300814	-356984	+	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	-357358	+	AB002314 NM_014728 AK289694	22889	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	675796	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	675867	+	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2	0.021447	
chr11	68923403	68923583	reg1043024.p2	3.581	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-65967	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-107067	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-107143	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	138129	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	532363	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	532417	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.0	
chr11	78176834	78176941	reg1028555.p2	3.581	+	TSC_hg19_v1_chr11_-_78128866 NM_080491	-48011	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	-48081	-	AB011143 BC152459 NM_012296	-123962	-	BC007800 TSC_hg19_v1_chr11_-_78285839 AK056980	108905	-	TSC_hg19_v1_chr11_-_78285888 AK315425 NM_001243251 NM_024678	109008	-	NM_001098816 TSC_hg19_v1_chr11_-_79151755	974837	-	NM_080491|GAB2|9846|GRB2-associated binding protein 2##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##BC007800|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK056980|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##AK315425|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001243251|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_024678|NARS2|79731|asparaginyl-tRNA synthetase 2, mitochondrial (putative)##NM_001098816|ODZ4|26011|odz, odd Oz/ten-m homolog 4 (Drosophila)	0.0	
chr16	15850131	15850225	reg1017763.p1	3.581	+	TSC_hg19_v1_chr16_-_15835382 D10667	-14731	-	BX641087 TSC_hg19_v1_chr16_-_15833973	-16223	-	NM_017668 BC001421 TSC_hg19_v1_chr16_+_15744101 AK000108 AK025815	-106071	+	BC101677 BC104906 BC143364 AB020673 AY520816 AY520817 TSC_hg19_v1_chr16_-_15950886 AK308389 BC031040 EU489063 NM_001040113 NM_001040114 NM_002474 NM_022844	100691	-	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	132275	-	AL832498 TSC_hg19_v1_chr16_-_15982471	132307	-	D10667|MYH11|4629|myosin, heavy chain 11, smooth muscle##BX641087|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_017668|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC001421|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK000108|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##AK025815|NDE1|54820|nudE nuclear distribution gene E homolog 1 (A. nidulans)##BC101677|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC104906|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC143364|MYH11|4629|myosin, heavy chain 11, smooth muscle##AB020673|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520816|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520817|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK308389|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC031040|MYH11|4629|myosin, heavy chain 11, smooth muscle##EU489063|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040113|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040114|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_002474|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_022844|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##AL832498|FOPNL|123811|FGFR1OP N-terminal like	0.0	
chr17	80309986	80310165	reg1001107.p2	3.581	+	TSC_hg19_v1_chr17_-_80291903 NM_003004	-18164	-	TSC_hg19_v1_chr17_-_80291859 AK290708	-18229	-	AK312980 U77643 TSC_hg19_v1_chr17_-_80291643 AK223104	-18429	-	BC036191 NM_207459 AK093086 AX747912 BC057820 BC050391	7058	+	BC136490 NM_018949 TSC_hg19_v1_chr17_+_80332304	22155	+	TSC_hg19_v1_chr17_+_80376228 NM_173620	66167	+	NM_003004|SECTM1|6398|secreted and transmembrane 1##AK290708|SECTM1|6398|secreted and transmembrane 1##AK312980|SECTM1|6398|secreted and transmembrane 1##U77643|SECTM1|6398|secreted and transmembrane 1##AK223104|SECTM1|6398|secreted and transmembrane 1##BC036191|TEX19|400629|testis expressed 19##NM_207459|TEX19|400629|testis expressed 19##AK093086|TEX19|400629|testis expressed 19##BC057820|TEX19|400629|testis expressed 19##BC050391|TEX19|400629|testis expressed 19##BC136490|UTS2R|2837|urotensin 2 receptor##NM_018949|UTS2R|2837|urotensin 2 receptor##NM_173620|HEXDC|284004|hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing	0.0	
chr22	28443624	28443754	reg1037079.p1	3.581	+	TSC_hg19_v1_chr22_-_28315245 BC018704 D30037 AK313064 CR456541 NM_012399	-128425	-	TSC_hg19_v1_chr22_-_28315203 BC031427	-128482	-	TSC_hg19_v1_chr22_-_28315184 AB528209 CU013141 CU013429 CU689164 AK302367	-128515	-	TSC_hg19_v1_chr22_-_29075801 NM_001145418	632104	-	BC004207 AK289360 CR456418 NM_001005735 NM_007194 NM_145862 AK290754 AB164374	694128	-	BC000004 TSC_hg19_v1_chr22_+_29138056 NM_172002 BC065569 CR456462 AY191719 AB528150 CU013013 CU013301	694372	+	BC018704|PITPNB|23760|phosphatidylinositol transfer protein, beta##D30037|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK313064|PITPNB|23760|phosphatidylinositol transfer protein, beta##CR456541|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_012399|PITPNB|23760|phosphatidylinositol transfer protein, beta##BC031427|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013141|PITPNB|23760|phosphatidylinositol transfer protein, beta##CU013429|PITPNB|23760|phosphatidylinositol transfer protein, beta##AK302367|PITPNB|23760|phosphatidylinositol transfer protein, beta##NM_001145418|TTC28|23331|tetratricopeptide repeat domain 28##BC004207|CHEK2|11200|checkpoint kinase 2##AK289360|CHEK2|11200|checkpoint kinase 2##CR456418|CHEK2|11200|checkpoint kinase 2##NM_001005735|CHEK2|11200|checkpoint kinase 2##NM_007194|CHEK2|11200|checkpoint kinase 2##NM_145862|CHEK2|11200|checkpoint kinase 2##AK290754|CHEK2|11200|checkpoint kinase 2##NM_172002|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##BC065569|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##CR456462|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)##AY191719|HSCB|150274|HscB iron-sulfur cluster co-chaperone homolog (E. coli)	0.0	
chr22	40395613	40395743	reg1043369.p2	3.581	+	TSC_hg19_v1_chr22_+_40390935 BC031099 NM_138435	-4734	+	AK303280 AK303657 AK312830 TSC_hg19_v1_chr22_+_40322634 AK303470	-73054	+	TSC_hg19_v1_chr22_+_40297183 AF129476 AF090456 CR456498 Y18051	-98431	+	TSC_hg19_v1_chr22_+_40440774 NM_001024843	45231	+	TSC_hg19_v1_chr22_+_40441403 BC028626	45754	+	TSC_hg19_v1_chr22_+_40573938 NM_001162501 NM_015088 AK296590 AK294519 AB029016	178321	+	BC031099|FAM83F|113828|family with sequence similarity 83, member F##NM_138435|FAM83F|113828|family with sequence similarity 83, member F##AK303280|GRAP2|9402|GRB2-related adaptor protein 2##AK303657|GRAP2|9402|GRB2-related adaptor protein 2##AK312830|GRAP2|9402|GRB2-related adaptor protein 2##AK303470|GRAP2|9402|GRB2-related adaptor protein 2##AF129476|GRAP2|9402|GRB2-related adaptor protein 2##AF090456|GRAP2|9402|GRB2-related adaptor protein 2##CR456498|GRAP2|9402|GRB2-related adaptor protein 2##Y18051|GRAP2|9402|GRB2-related adaptor protein 2##NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B##BC028626|TNRC6B|23112|trinucleotide repeat containing 6B##NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B##NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B##AK296590|TNRC6B|23112|trinucleotide repeat containing 6B##AK294519|TNRC6B|23112|trinucleotide repeat containing 6B##AB029016|TNRC6B|23112|trinucleotide repeat containing 6B	0.023656	
chr3	38067260	38067405	reg1033146.p2	3.581	+	NM_001130964	-1055	-	TSC_hg19_v1_chr3_-_38066000 AK090774 AX746610	-1302	-	TSC_hg19_v1_chr3_+_38035642 AK309304	-31670	+	AB385114 BC056157 AB209862 U09117 BC050382 AK098690 AK127813 AK292324 NM_006225 TSC_hg19_v1_chr3_-_38071155	3760	-	AB020522 BC129824 BC129825 BC171799 NM_007335 NM_007337 AK302803 AB425198	13377	+	AF035295 TSC_hg19_v1_chr3_-_38178569 CU677013 CU680144 DQ891298 DQ893346 DQ894482 AK303251 AB529164 BC014474 X12966 X14813 AK025138 AK293716 BC011977	111184	-	NM_001130964|PLCD1|5333|phospholipase C, delta 1##AK090774|PLCD1|5333|phospholipase C, delta 1##AK309304|VILL|50853|villin-like##AB209862|PLCD1|5333|phospholipase C, delta 1##U09117|PLCD1|5333|phospholipase C, delta 1##BC050382|PLCD1|5333|phospholipase C, delta 1##AK098690|PLCD1|5333|phospholipase C, delta 1##AK127813|PLCD1|5333|phospholipase C, delta 1##AK292324|PLCD1|5333|phospholipase C, delta 1##NM_006225|PLCD1|5333|phospholipase C, delta 1##AB020522|DLEC1|9940|deleted in lung and esophageal cancer 1##BC129824|DLEC1|9940|deleted in lung and esophageal cancer 1##BC129825|DLEC1|9940|deleted in lung and esophageal cancer 1##BC171799|DLEC1|9940|deleted in lung and esophageal cancer 1##NM_007335|DLEC1|9940|deleted in lung and esophageal cancer 1##NM_007337|DLEC1|9940|deleted in lung and esophageal cancer 1##AK302803|DLEC1|9940|deleted in lung and esophageal cancer 1##AB425198|DLEC1|9940|deleted in lung and esophageal cancer 1##AF035295|ACAA1|30|acetyl-CoA acyltransferase 1##DQ891298|ACAA1|30|acetyl-CoA acyltransferase 1##DQ893346|ACAA1|30|acetyl-CoA acyltransferase 1##DQ894482|ACAA1|30|acetyl-CoA acyltransferase 1##AK303251|ACAA1|30|acetyl-CoA acyltransferase 1##BC014474|ACAA1|30|acetyl-CoA acyltransferase 1##X12966|ACAA1|30|acetyl-CoA acyltransferase 1##X14813|ACAA1|30|acetyl-CoA acyltransferase 1##AK025138|ACAA1|30|acetyl-CoA acyltransferase 1##AK293716|ACAA1|30|acetyl-CoA acyltransferase 1##BC011977|ACAA1|30|acetyl-CoA acyltransferase 1	0.0	
chr4	190802507	190802626	reg1038123.p1	3.581	+	AK093499 AX748169 NM_178556 BC113860 BC114469	-1741946	+	BC111959 BC111961 BC143709 AK098667 NM_173553	-1776162	-	AK056719 AY429593 NM_174900	-1885642	+	L76159 NM_004477 AK291890 BC053997 TSC_hg19_v1_chr4_+_190862026	59441	+	TSC_hg19_v1_chr4_+_190862048 CU691066	59539	+	BC144572 AY714545 NM_001005217 NM_001199232	145837	-	AK093499|TRIML1|339976|tripartite motif family-like 1##NM_178556|TRIML1|339976|tripartite motif family-like 1##BC113860|TRIML1|339976|tripartite motif family-like 1##BC114469|TRIML1|339976|tripartite motif family-like 1##BC111959|TRIML2|205860|tripartite motif family-like 2##BC111961|TRIML2|205860|tripartite motif family-like 2##BC143709|TRIML2|205860|tripartite motif family-like 2##AK098667|TRIML2|205860|tripartite motif family-like 2##NM_173553|TRIML2|205860|tripartite motif family-like 2##AK056719|ZFP42|132625|zinc finger protein 42 homolog (mouse)##AY429593|ZFP42|132625|zinc finger protein 42 homolog (mouse)##NM_174900|ZFP42|132625|zinc finger protein 42 homolog (mouse)##L76159|FRG1|2483|FSHD region gene 1##NM_004477|FRG1|2483|FSHD region gene 1##AK291890|FRG1|2483|FSHD region gene 1##BC053997|FRG1|2483|FSHD region gene 1##BC144572|FRG2|448831|FSHD region gene 2##AY714545|FRG2|448831|FSHD region gene 2##NM_001005217|FRG2|448831|FSHD region gene 2##NM_001199232|LOC100288255|100288255|FSHD region gene 2-like	0.0	
chr9	5586702	5586839	reg1031601.p2	3.581	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	-76107	+	TSC_hg19_v1_chr9_+_5450455 NM_014143 DQ836393 AK300470 AK314567 AF233516 BC069381	-136263	+	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	-148890	-	TSC_hg19_v1_chr9_+_5629121 NM_001135920 NM_001206557 NM_020829	42357	+	BC036853 TSC_hg19_v1_chr9_-_5630098	43320	-	AL834191 AB058718 TSC_hg19_v1_chr9_-_5833045 BC136771 BC136773 BC144404	246181	-	AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_014143|CD274|29126|CD274 molecule##DQ836393|CD274|29126|CD274 molecule##AK300470|CD274|29126|CD274 molecule##AK314567|CD274|29126|CD274 molecule##AF233516|CD274|29126|CD274 molecule##BC069381|CD274|29126|CD274 molecule##BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46##NM_001135920|KIAA1432|57589|KIAA1432##NM_001206557|KIAA1432|57589|KIAA1432##NM_020829|KIAA1432|57589|KIAA1432##BC036853|C9orf46|55848|chromosome 9 open reading frame 46##AL834191|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##AB058718|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136771|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC136773|ERMP1|79956|endoplasmic reticulum metallopeptidase 1##BC144404|ERMP1|79956|endoplasmic reticulum metallopeptidase 1	0.0	
chr10	104429716	104429810	reg1040660.p1	3.580	+	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	-25479	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	-165944	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	-166044	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	44334	-	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	44582	+	TSC_hg19_v1_chr10_+_104503704 AK300871	73907	+	NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2##AK300871|C10orf26|54838|chromosome 10 open reading frame 26	0.449068	CTCF.p2:-20:0.449
chr10	22946870	22946993	reg1039198.p1	3.580	+	TSC_hg19_v1_chr10_+_22726003 AK295718	-220932	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-312475	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-336766	+	AK294817 TSC_hg19_v1_chr10_-_23003038	56106	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	56559	-	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	270050	+	AK295718|LOC100289455|100289455|uncharacterized LOC100289455##NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3	0.0	
chr11	10339545	10339635	reg1027555.p2	3.580	+	TSC_hg19_v1_chr11_+_10326623 AK312893 BC015961 D14874 NM_001124	-12961	+	TSC_hg19_v1_chr11_-_10315755 BC101466 AY234241 NM_030962	-23824	-	AK098060 TSC_hg19_v1_chr11_+_9779882	-559728	+	AK295046 NM_001172431	132277	+	NM_000480 BC126118 TSC_hg19_v1_chr11_+_10472246 AK311436 M84720 AK289998 AK294444 AK313039 HQ258646	132805	+	NM_001025389 D12775 AK308181 M84721 AK299113 TSC_hg19_v1_chr11_+_10476953	137229	+	AK312893|ADM|133|adrenomedullin##BC015961|ADM|133|adrenomedullin##D14874|ADM|133|adrenomedullin##NM_001124|ADM|133|adrenomedullin##BC101466|SBF2|81846|SET binding factor 2##AY234241|SBF2|81846|SET binding factor 2##NM_030962|SBF2|81846|SET binding factor 2##AK098060|LOC283104|283104|uncharacterized LOC283104##AK295046|AMPD3|272|adenosine monophosphate deaminase 3##NM_001172431|AMPD3|272|adenosine monophosphate deaminase 3##NM_000480|AMPD3|272|adenosine monophosphate deaminase 3##BC126118|AMPD3|272|adenosine monophosphate deaminase 3##AK311436|AMPD3|272|adenosine monophosphate deaminase 3##M84720|AMPD3|272|adenosine monophosphate deaminase 3##AK289998|AMPD3|272|adenosine monophosphate deaminase 3##AK294444|AMPD3|272|adenosine monophosphate deaminase 3##AK313039|AMPD3|272|adenosine monophosphate deaminase 3##HQ258646|AMPD3|272|adenosine monophosphate deaminase 3##NM_001025389|AMPD3|272|adenosine monophosphate deaminase 3##D12775|AMPD3|272|adenosine monophosphate deaminase 3##AK308181|AMPD3|272|adenosine monophosphate deaminase 3##M84721|AMPD3|272|adenosine monophosphate deaminase 3##AK299113|AMPD3|272|adenosine monophosphate deaminase 3	0.0	
chr1	12984332	12984447	reg1034258.p2	3.580	+	BC144565 NM_001012277	-6911	+	NM_001012276 BC140755	-7932	+	BC112208 BC112210 NM_001039361 AL049682	-26296	-	BC101342 NM_001010889	23016	-	NM_001100631 AB464060	51156	+	BC130274 BC130276 BC101344 NM_001013407	133353	-	BC144565|PRAMEF7|441871|PRAME family member 7##NM_001012277|PRAMEF7|441871|PRAME family member 7##NM_001012276|PRAMEF8|391002|PRAME family member 8##BC140755|PRAMEF7|441871|PRAME family member 7##BC112208|PRAMEF10|343071|PRAME family member 10##BC112210|PRAMEF10|343071|PRAME family member 10##NM_001039361|PRAMEF10|343071|PRAME family member 10##AL049682|PRAMEF10|343071|PRAME family member 10##BC101342|PRAMEF6|440561|PRAME family member 6##NM_001010889|PRAMEF6|440561|PRAME family member 6##NM_001100631|PRAMEF22|653606|PRAME family member 22##BC130274|PRAMEF5|343068|PRAME family member 5##BC130276|PRAMEF5|343068|PRAME family member 5##BC101344|PRAMEF5|343068|PRAME family member 5##NM_001013407|PRAMEF5|343068|PRAME family member 5	0.84966	CTCF.p2:17:0.850
chr12	10876308	10876388	reg1039439.p2	3.580	+	TSC_hg19_v1_chr12_-_10875923 X95325 BC015913 BC015564 BC021926 BC009744 M24069 BC008801 X72712 AK314846 NM_001145426 NM_003651	-447	-	TSC_hg19_v1_chr12_-_10875782 AB463536 DQ892686 DQ895930	-606	-	AF251059 NM_018423	-49458	-	BC069091 AB529261 BC093992 BC113561 NM_023919	78848	-	BC069084 BC069551 BC096701 BC096735 BC098167 BC098353 NM_023918 AB529262 CU686904	83230	-	BC069066 AB529263 BC095519 NM_023917	86371	-	X95325|CSDA|8531|cold shock domain protein A##BC015913|CSDA|8531|cold shock domain protein A##BC015564|CSDA|8531|cold shock domain protein A##BC021926|CSDA|8531|cold shock domain protein A##BC009744|CSDA|8531|cold shock domain protein A##M24069|CSDA|8531|cold shock domain protein A##BC008801|CSDA|8531|cold shock domain protein A##X72712|CSDA|8531|cold shock domain protein A##AK314846|CSDA|8531|cold shock domain protein A##NM_001145426|CSDA|8531|cold shock domain protein A##NM_003651|CSDA|8531|cold shock domain protein A##DQ892686|CSDA|8531|cold shock domain protein A##DQ895930|CSDA|8531|cold shock domain protein A##AF251059|STYK1|55359|serine/threonine/tyrosine kinase 1##NM_018423|STYK1|55359|serine/threonine/tyrosine kinase 1##BC069091|TAS2R7|50837|taste receptor, type 2, member 7##BC093992|TAS2R7|50837|taste receptor, type 2, member 7##BC113561|TAS2R7|50837|taste receptor, type 2, member 7##NM_023919|TAS2R7|50837|taste receptor, type 2, member 7##BC069084|TAS2R8|50836|taste receptor, type 2, member 8##BC069551|TAS2R8|50836|taste receptor, type 2, member 8##BC096701|TAS2R8|50836|taste receptor, type 2, member 8##BC096735|TAS2R8|50836|taste receptor, type 2, member 8##BC098167|TAS2R8|50836|taste receptor, type 2, member 8##BC098353|TAS2R8|50836|taste receptor, type 2, member 8##NM_023918|TAS2R8|50836|taste receptor, type 2, member 8##BC069066|TAS2R9|50835|taste receptor, type 2, member 9##BC095519|TAS2R9|50835|taste receptor, type 2, member 9##NM_023917|TAS2R9|50835|taste receptor, type 2, member 9	0.0	
chr14	23294345	23294435	reg1033246.p2	3.580	+	Y18474 BX248291 AF092032 AJ130718 NM_001126106	-5425	-	AB020532 BX161519 NM_001126105	-9332	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	-9758	-	TSC_hg19_v1_chr14_+_23299095 AK096946 NM_178336 NM_180982 NM_181304 NM_181305 NM_181306 NM_181307	4701	+	TSC_hg19_v1_chr14_+_23299104 AK292011 AK000450 BX248749 BC055381 BC068070	4720	+	NM_004995 AK312657 TSC_hg19_v1_chr14_+_23305800 AK291325 BC064803	11410	+	Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AB020532|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX161519|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126105|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK096946|MRPL52|122704|mitochondrial ribosomal protein L52##NM_178336|MRPL52|122704|mitochondrial ribosomal protein L52##NM_180982|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181304|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181305|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181306|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181307|MRPL52|122704|mitochondrial ribosomal protein L52##AK292011|MRPL52|122704|mitochondrial ribosomal protein L52##AK000450|MRPL52|122704|mitochondrial ribosomal protein L52##BX248749|MRPL52|122704|mitochondrial ribosomal protein L52##BC055381|MRPL52|122704|mitochondrial ribosomal protein L52##BC068070|MRPL52|122704|mitochondrial ribosomal protein L52##NM_004995|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##AK312657|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##AK291325|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##BC064803|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	0.0	
chr17	3626807	3626880	reg1036760.p1	3.580	+	AB209623 BC016917 AK307959 TSC_hg19_v1_chr17_-_3599535 BC008319 AK290889 NM_001204519 NM_001204520 NM_002561 NM_175080	-27251	-	BC006220 BC028084 TSC_hg19_v1_chr17_-_3599406 BC039015	-27439	-	DQ234349 CU691640 AB528606 TSC_hg19_v1_chr17_-_3599311 AF070573 AF016709 U49395 U49396	-27531	-	TSC_hg19_v1_chr17_-_3627077 AF289864	259	-	TSC_hg19_v1_chr17_+_3627210 AK310546 AK315247 BC036181 NM_031965 AK056691 AB039834 AF289865 BC050662 AK292715 BC016626 BC047457	373	+	HQ258689 TSC_hg19_v1_chr17_-_3704463	77610	-	AB209623|P2RX5-TAX1BP3|100533970|P2RX5-TAX1BP3 readthrough##BC016917|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK307959|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC008319|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK290889|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204519|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204520|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_002561|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_175080|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC006220|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC028084|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC039015|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##DQ234349|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AF070573|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AF016709|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##U49395|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##U49396|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AF289864|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC036181|GSG2|83903|germ cell associated 2 (haspin)##NM_031965|GSG2|83903|germ cell associated 2 (haspin)##AK056691|GSG2|83903|germ cell associated 2 (haspin)##AB039834|GSG2|83903|germ cell associated 2 (haspin)##AF289865|GSG2|83903|germ cell associated 2 (haspin)##BC050662|GSG2|83903|germ cell associated 2 (haspin)##AK292715|GSG2|83903|germ cell associated 2 (haspin)##BC016626|GSG2|83903|germ cell associated 2 (haspin)##BC047457|GSG2|83903|germ cell associated 2 (haspin)##HQ258689|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)	0.416912	CTCF.p2:47:0.417
chr22	35748239	35748387	reg1030989.p1	3.580	+	TSC_hg19_v1_chr22_+_35695886 AK097066 AK297827 AK295918 AK296670 AK314522 AK097926 CR456595 BC005144 BC040006 BC046151 AB463301 CU013195 CU013483 CU692314	-52417	+	TSC_hg19_v1_chr22_+_35695855 NM_001135730 NM_001135732 NM_005488 AK026576 AJ006973 AY358980	-52482	+	AK293694 NM_001135729	-53046	+	CR456505 NM_002133 TSC_hg19_v1_chr22_+_35777085 X06985	28755	+	TSC_hg19_v1_chr22_+_35777088 AK313120 BC001491 M23041 AB528477 BT019785 CR541945 CR541968 CU013103 CU013391 DQ892310 DQ895510 JF323038	28813	+	AF051791 TSC_hg19_v1_chr22_+_35779219	30849	+	AK097066|TOM1|10043|target of myb1 (chicken)##AK297827|TOM1|10043|target of myb1 (chicken)##AK295918|TOM1|10043|target of myb1 (chicken)##AK296670|TOM1|10043|target of myb1 (chicken)##AK314522|TOM1|10043|target of myb1 (chicken)##AK097926|TOM1|10043|target of myb1 (chicken)##CR456595|TOM1|10043|target of myb1 (chicken)##BC040006|TOM1|10043|target of myb1 (chicken)##BC046151|TOM1|10043|target of myb1 (chicken)##CU013195|TOM1|10043|target of myb1 (chicken)##CU013483|TOM1|10043|target of myb1 (chicken)##NM_001135730|TOM1|10043|target of myb1 (chicken)##NM_001135732|TOM1|10043|target of myb1 (chicken)##NM_005488|TOM1|10043|target of myb1 (chicken)##AK026576|TOM1|10043|target of myb1 (chicken)##AJ006973|TOM1|10043|target of myb1 (chicken)##AY358980|TOM1|10043|target of myb1 (chicken)##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)##CR456505|HMOX1|3162|heme oxygenase (decycling) 1##NM_002133|HMOX1|3162|heme oxygenase (decycling) 1##X06985|HMOX1|3162|heme oxygenase (decycling) 1##AK313120|HMOX1|3162|heme oxygenase (decycling) 1##BC001491|HMOX1|3162|heme oxygenase (decycling) 1##M23041|HMOX1|3162|heme oxygenase (decycling) 1##BT019785|HMOX1|3162|heme oxygenase (decycling) 1##CR541945|HMOX1|3162|heme oxygenase (decycling) 1##CR541968|HMOX1|3162|heme oxygenase (decycling) 1##CU013103|HMOX1|3162|heme oxygenase (decycling) 1##CU013391|HMOX1|3162|heme oxygenase (decycling) 1##DQ892310|HMOX1|3162|heme oxygenase (decycling) 1##DQ895510|HMOX1|3162|heme oxygenase (decycling) 1##JF323038|HMOX1|3162|heme oxygenase (decycling) 1##AF051791|HMOX1|3162|heme oxygenase (decycling) 1	0.691821	CTCF.p2:8:0.692
chr2	237218467	237218544	reg1019119.p2	3.580	+	NM_212556 BX647589	-45511	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-141873	-	AK311262 TSC_hg19_v1_chr2_-_237076045	-142491	-	BC043504 NM_024726 AK294105 BC028699	197627	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	259923	+	BC036499 NM_006710 NM_198189	775513	+	NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	0.0	
chr22	37256861	37256971	reg1034764.p1	3.580	+	BC069300 NM_002854 BC096112 BC096113 BC096114 BC096115 X63070	-41397	-	AL022729 TSC_hg19_v1_chr22_-_37172162 AK307105 AK307382 BC000566 AB209424 NM_001177701 NM_006860	-84761	-	NM_001177702	-92843	-	TSC_hg19_v1_chr22_+_37257047 BC002798 NM_000631 NM_013416 AK223324 AK290924 CR456528 AB025219 AB025220 AB463139 CU013128 CU013416 BT007346 CR542078	192	+	TSC_hg19_v1_chr22_+_37309687 BC070085 NM_000395	52742	+	BC042635 CR456416 NM_001163857 NM_178552	146941	-	BC069300|PVALB|5816|parvalbumin##NM_002854|PVALB|5816|parvalbumin##BC096112|PVALB|5816|parvalbumin##BC096113|PVALB|5816|parvalbumin##BC096114|PVALB|5816|parvalbumin##BC096115|PVALB|5816|parvalbumin##X63070|PVALB|5816|parvalbumin##AL022729|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307105|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AK307382|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC000566|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##AB209424|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177701|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_006860|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##NM_001177702|IFT27|11020|intraflagellar transport 27 homolog (Chlamydomonas)##BC002798|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_000631|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##NM_013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK223324|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AK290924|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR456528|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025219|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##AB025220|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013128|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CU013416|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BT007346|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##CR542078|NCF4|4689|neutrophil cytosolic factor 4, 40kDa##BC070085|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##NM_000395|CSF2RB|1439|colony stimulating factor 2 receptor, beta, low-affinity (granulocyte-macrophage)##BC042635|C22orf33|339669|chromosome 22 open reading frame 33##CR456416|C22orf33|339669|chromosome 22 open reading frame 33##NM_001163857|C22orf33|339669|chromosome 22 open reading frame 33##NM_178552|C22orf33|339669|chromosome 22 open reading frame 33	0.0	
chr2	25438542	25438608	reg1027093.p1	3.580	+	NM_000939 NM_001035256	-47017	-	TSC_hg19_v1_chr2_+_25264954 NM_014971 AB023170	-173598	+	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	-243708	-	TSC_hg19_v1_chr2_-_25466801 BC018214	28233	-	TSC_hg19_v1_chr2_-_25467080 BC023612	28560	-	TSC_hg19_v1_chr2_-_25468920 AK025230	30403	-	NM_000939|POMC|5443|proopiomelanocortin##NM_001035256|POMC|5443|proopiomelanocortin##NM_014971|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AB023170|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC018214|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.0	
chr2	25457599	25457670	reg1035536.p1	3.580	+	NM_000939 NM_001035256	-66076	-	TSC_hg19_v1_chr2_+_25264954 NM_014971 AB023170	-192657	+	AF178983 AY094594 TSC_hg19_v1_chr2_-_25194828 BC034049 AL137731 NM_001198559 NM_016544	-262767	-	TSC_hg19_v1_chr2_-_25466801 BC018214	9174	-	TSC_hg19_v1_chr2_-_25467080 BC023612	9501	-	TSC_hg19_v1_chr2_-_25468920 AK025230	11344	-	NM_000939|POMC|5443|proopiomelanocortin##NM_001035256|POMC|5443|proopiomelanocortin##NM_014971|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AB023170|EFR3B|22979|EFR3 homolog B (S. cerevisiae)##AF178983|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AY094594|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC034049|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##AL137731|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_001198559|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##NM_016544|DNAJC27|51277|DnaJ (Hsp40) homolog, subfamily C, member 27##BC018214|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.0	
chr2	30660192	30660359	reg1041401.p2	3.580	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-205773	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-290399	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	-290442	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	9873	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	370018	-	AK122747 NM_001253827	692222	-	AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.0	
chr7	101459210	101459321	reg1045816.p1	3.580	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-56	+	BC002778 NM_138403	-186690	-	NM_133457 TSC_hg19_v1_chr7_+_101006130 BC085006 BC110393 AJ416091 BC109254	-453048	+	M74099 NM_181552	1616	+	TSC_hg19_v1_chr7_+_101928390 NM_020979	469132	+	TSC_hg19_v1_chr7_+_101928431 AB000520	469178	+	NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_133457|EMID2|136227|EMI domain containing 2##BC110393|EMID2|136227|EMI domain containing 2##AJ416091|EMID2|136227|EMI domain containing 2##BC109254|EMID2|136227|EMI domain containing 2##M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2	1.077713	CTCF.p2:-18:0.699	CTCF.p2:44:0.379
chr7	102558193	102558309	reg1041160.p1	3.580	+	NM_001031692 NM_005824 TSC_hg19_v1_chr7_+_102553446 AK226021 AK225701 U32907 AK290305 BC027903 AY358889	-4819	+	TSC_hg19_v1_chr7_+_102389473 NM_001145268 NM_001145269 BC029175 AK297455 AK298753 AK054745 DQ893359 DQ896678	-168761	+	BC056864 BC071870 TSC_hg19_v1_chr7_-_102312111 BC044209 BC050598 BC110985 BC086857 NM_032959	-246131	-	AK097537 NM_145032	156763	-	AY359238 AY359239 AK095387 BC031285 BC026121 NM_001111038	156978	-	TSC_hg19_v1_chr7_+_102715335 AY150851 AY150852 AY150853 AY150854 NM_001161009 NM_001161010 NM_001161011 NM_001161012 NM_001161013 NM_031905	157065	+	NM_001031692|LRRC17|10234|leucine rich repeat containing 17##NM_005824|LRRC17|10234|leucine rich repeat containing 17##AK226021|LRRC17|10234|leucine rich repeat containing 17##AK225701|LRRC17|10234|leucine rich repeat containing 17##U32907|LRRC17|10234|leucine rich repeat containing 17##AK290305|LRRC17|10234|leucine rich repeat containing 17##BC027903|LRRC17|10234|leucine rich repeat containing 17##AY358889|LRRC17|10234|leucine rich repeat containing 17##NM_001145268|FAM185A|222234|family with sequence similarity 185, member A##NM_001145269|FAM185A|222234|family with sequence similarity 185, member A##BC029175|FAM185A|222234|family with sequence similarity 185, member A##AK297455|FAM185A|222234|family with sequence similarity 185, member A##AK298753|FAM185A|222234|family with sequence similarity 185, member A##AK054745|FAM185A|222234|family with sequence similarity 185, member A##DQ893359|FAM185A|222234|family with sequence similarity 185, member A##DQ896678|FAM185A|222234|family with sequence similarity 185, member A##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC086857|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_032959|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AK097537|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_145032|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY359238|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY359239|FBXL13|222235|F-box and leucine-rich repeat protein 13##AK095387|FBXL13|222235|F-box and leucine-rich repeat protein 13##BC031285|FBXL13|222235|F-box and leucine-rich repeat protein 13##BC026121|FBXL13|222235|F-box and leucine-rich repeat protein 13##NM_001111038|FBXL13|222235|F-box and leucine-rich repeat protein 13##AY150851|ARMC10|83787|armadillo repeat containing 10##AY150852|ARMC10|83787|armadillo repeat containing 10##AY150853|ARMC10|83787|armadillo repeat containing 10##AY150854|ARMC10|83787|armadillo repeat containing 10##NM_001161009|ARMC10|83787|armadillo repeat containing 10##NM_001161010|ARMC10|83787|armadillo repeat containing 10##NM_001161011|ARMC10|83787|armadillo repeat containing 10##NM_001161012|ARMC10|83787|armadillo repeat containing 10##NM_001161013|ARMC10|83787|armadillo repeat containing 10##NM_031905|ARMC10|83787|armadillo repeat containing 10	0.0	
chr9	36458699	36458880	reg1028479.p2	3.580	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-57614	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-57892	-	AL136817 BC033786 NM_022781 NM_194329	-58536	-	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	114135	+	TSC_hg19_v1_chr9_-_37034361 NM_016734	575627	-	TSC_hg19_v1_chr9_+_37079908 AK091718	621117	+	NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##AL136817|RNF38|152006|ring finger protein 38##BC033786|RNF38|152006|ring finger protein 38##NM_022781|RNF38|152006|ring finger protein 38##NM_194329|RNF38|152006|ring finger protein 38##AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.0	
chr9	95449400	95449481	reg1044042.p1	3.580	+	TSC_hg19_v1_chr9_-_95432542 BC026154 NM_022755	-16883	-	AF520811 TSC_hg19_v1_chr9_-_95432355 AK023225 AF351202	-17127	-	AB011792 AK303922 AK312820 AK296458 BX537976 NM_001197295 NM_001197296 NM_001393	-151128	-	AB014599 TSC_hg19_v1_chr9_-_95527124 AY052562 NM_001003800 NM_015250 BC073970	77643	-	AK299274 TSC_hg19_v1_chr9_-_95640325 AK091203 AX746846 NM_001007101 AL833202 NM_031486 AK292997 AK309617	190837	-	NM_001083536	260160	+	BC026154|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##NM_022755|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF520811|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AK023225|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AF351202|IPPK|64768|inositol 1,3,4,5,6-pentakisphosphate 2-kinase##AB011792|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK303922|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK312820|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AK296458|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##BX537976|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197295|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001197296|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##NM_001393|ECM2|1842|extracellular matrix protein 2, female organ and adipocyte specific##AB014599|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AY052562|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_001003800|BICD2|23299|bicaudal D homolog 2 (Drosophila)##NM_015250|BICD2|23299|bicaudal D homolog 2 (Drosophila)##BC073970|BICD2|23299|bicaudal D homolog 2 (Drosophila)##AK299274|ZNF484|83744|zinc finger protein 484##AK091203|ZNF484|83744|zinc finger protein 484##NM_001007101|ZNF484|83744|zinc finger protein 484##AL833202|ZNF484|83744|zinc finger protein 484##NM_031486|ZNF484|83744|zinc finger protein 484##AK292997|ZNF484|83744|zinc finger protein 484##AK309617|ZNF484|83744|zinc finger protein 484##NM_001083536|FGD3|89846|FYVE, RhoGEF and PH domain containing 3	0.052137	
chr1	203338740	203338881	reg1017295.p2	3.579	+	TSC_hg19_v1_chr1_-_203320290 NM_002023	-18522	-	AK172740 TSC_hg19_v1_chr1_-_203320256	-18549	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	-18601	-	NM_002725 NM_201348 TSC_hg19_v1_chr1_+_203444937	106099	+	U29089 BC032498 TSC_hg19_v1_chr1_+_203444965	106150	+	AJ133790 AY077681 NM_014359 AF161702	124471	+	NM_002023|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin##NM_002725|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##NM_201348|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##U29089|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##BC032498|PRELP|5549|proline/arginine-rich end leucine-rich repeat protein##AJ133790|OPTC|26254|opticin##AY077681|OPTC|26254|opticin##NM_014359|OPTC|26254|opticin##AF161702|OPTC|26254|opticin	0.0	
chr12	3632403	3632498	reg1034140.p2	3.579	+	AK125333 TSC_hg19_v1_chr12_-_3601984	-30465	-	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	-32009	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-445888	+	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	229818	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	229932	-	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	350050	-	AK125333|LOC100129223|100129223|uncharacterized LOC100129223##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11	0.0	
chr13	100258378	100258511	reg1028987.p1	3.579	+	BC041830 TSC_hg19_v1_chr13_+_100229390	-29067	+	TSC_hg19_v1_chr13_+_100153777 BC130293	-104662	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	-104744	+	TSC_hg19_v1_chr13_+_100258943 NM_206808 AK300510 BC034360 AK095506 AF428253 CU689862	476	+	AF378304 NM_033132	365725	-	TSC_hg19_v1_chr13_+_100633453 AK298232	375011	+	BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_206808|CLYBL|171425|citrate lyase beta like##AK300510|CLYBL|171425|citrate lyase beta like##BC034360|CLYBL|171425|citrate lyase beta like##AK095506|CLYBL|171425|citrate lyase beta like##AF428253|CLYBL|171425|citrate lyase beta like##AF378304|ZIC5|85416|Zic family member 5##NM_033132|ZIC5|85416|Zic family member 5	0.071361	
chr14	68772623	68772743	reg1034930.p1	3.579	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-486163	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-489384	-	AK315462 NM_152443	-604081	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	487037	-	NM_001244698 NM_004926	487947	-	NM_001244701 AB528867	490301	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr16	68299129	68299283	reg1035925.p2	3.579	+	TSC_hg19_v1_chr16_+_68298430 NM_001076785 NM_003983 CR749291 CR749475 AK310866 BC028216	-756	+	AB017494 TSC_hg19_v1_chr16_+_68279299 AY358425 EU832326	-19895	+	AK300596 AK074828 NM_012320 TSC_hg19_v1_chr16_+_68279275 AK296263 AK298494 AL110209 BC062605 AK001705 AK222790	-19956	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	45620	-	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	45753	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	183275	-	NM_001076785|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##NM_003983|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749291|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749475|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK310866|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC028216|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AB017494|PLA2G15|23659|phospholipase A2, group XV##AY358425|PLA2G15|23659|phospholipase A2, group XV##EU832326|PLA2G15|23659|phospholipase A2, group XV##AK300596|PLA2G15|23659|phospholipase A2, group XV##AK074828|PLA2G15|23659|phospholipase A2, group XV##NM_012320|PLA2G15|23659|phospholipase A2, group XV##AK296263|PLA2G15|23659|phospholipase A2, group XV##AK298494|PLA2G15|23659|phospholipase A2, group XV##AL110209|PLA2G15|23659|phospholipase A2, group XV##BC062605|PLA2G15|23659|phospholipase A2, group XV##AK001705|PLA2G15|23659|phospholipase A2, group XV##AK222790|PLA2G15|23659|phospholipase A2, group XV##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	0.0	
chr17	61819529	61819667	reg1034059.p2	3.579	+	TSC_hg19_v1_chr17_-_61819199 AF308302 AK074771 AK293160 AY290821 NM_001003786 NM_001003787 NM_001003788 NM_001165969 NM_001165970 NM_153335	-351	-	BC043641 TSC_hg19_v1_chr17_-_61819160 AL832407 AK301331 AK075005	-457	-	TSC_hg19_v1_chr17_-_61777486 AK092301 AX747464 BC004400 NM_030576 AY037154	-42080	-	TSC_hg19_v1_chr17_-_61850935 BC008905 AK027844 AK027786 AK075387 AF226054 AK314328	31319	-	TSC_hg19_v1_chr17_-_61850958 AK225813 NM_020198	31422	-	TSC_hg19_v1_chr17_+_61851529 AK125169	31924	+	AF308302|STRADA|92335|STE20-related kinase adaptor alpha##AK074771|STRADA|92335|STE20-related kinase adaptor alpha##AK293160|STRADA|92335|STE20-related kinase adaptor alpha##AY290821|STRADA|92335|STE20-related kinase adaptor alpha##NM_001003786|STRADA|92335|STE20-related kinase adaptor alpha##NM_001003787|STRADA|92335|STE20-related kinase adaptor alpha##NM_001003788|STRADA|92335|STE20-related kinase adaptor alpha##NM_001165969|STRADA|92335|STE20-related kinase adaptor alpha##NM_001165970|STRADA|92335|STE20-related kinase adaptor alpha##NM_153335|STRADA|92335|STE20-related kinase adaptor alpha##BC043641|STRADA|92335|STE20-related kinase adaptor alpha##AL832407|STRADA|92335|STE20-related kinase adaptor alpha##AK301331|STRADA|92335|STE20-related kinase adaptor alpha##AK075005|STRADA|92335|STE20-related kinase adaptor alpha##AK092301|LIMD2|80774|LIM domain containing 2##BC004400|LIMD2|80774|LIM domain containing 2##NM_030576|LIMD2|80774|LIM domain containing 2##AY037154|LIMD2|80774|LIM domain containing 2##BC008905|CCDC47|57003|coiled-coil domain containing 47##AK027844|CCDC47|57003|coiled-coil domain containing 47##AK027786|CCDC47|57003|coiled-coil domain containing 47##AK075387|CCDC47|57003|coiled-coil domain containing 47##AF226054|CCDC47|57003|coiled-coil domain containing 47##AK314328|CCDC47|57003|coiled-coil domain containing 47##AK225813|CCDC47|57003|coiled-coil domain containing 47##NM_020198|CCDC47|57003|coiled-coil domain containing 47	0.0	
chr17	71253307	71253410	reg1025802.p1	3.579	+	BC005005 TSC_hg19_v1_chr17_+_71229423	-23968	+	TSC_hg19_v1_chr17_+_71228800 AY163812 NM_001100621 NM_001100622 NM_017941 AL136740 AK000728	-24552	+	TSC_hg19_v1_chr17_+_71228596 AK292838	-24764	+	BC157870 NM_001129885	4660	-	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	54782	-	NM_001144952	386868	-	BC005005|C17orf80|55028|chromosome 17 open reading frame 80##AY163812|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100621|C17orf80|55028|chromosome 17 open reading frame 80##NM_001100622|C17orf80|55028|chromosome 17 open reading frame 80##NM_017941|C17orf80|55028|chromosome 17 open reading frame 80##AL136740|C17orf80|55028|chromosome 17 open reading frame 80##AK000728|C17orf80|55028|chromosome 17 open reading frame 80##AK292838|C17orf80|55028|chromosome 17 open reading frame 80##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2	0.0	
chr18	48804552	48804660	reg1037497.p2	3.579	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-80566	-	AY950679 TSC_hg19_v1_chr18_-_48723734	-80894	-	AB463885 BC032952 BC153820 TSC_hg19_v1_chr18_-_48723317 AK096190	-81380	-	NM_005215 TSC_hg19_v1_chr18_+_49866541	1061935	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	1062507	+	TSC_hg19_v1_chr18_-_51690988 AL110266	2886386	-	NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AY950679|MEX3C|51320|mex-3 homolog C (C. elegans)##BC032952|MEX3C|51320|mex-3 homolog C (C. elegans)##BC153820|MEX3C|51320|mex-3 homolog C (C. elegans)##AK096190|MEX3C|51320|mex-3 homolog C (C. elegans)##NM_005215|DCC|1630|deleted in colorectal carcinoma##M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##AL110266|MBD2|8932|methyl-CpG binding domain protein 2	1.817841	CTCF.p2:-4:0.966	CTCF.p2:33:0.852
chr1	9747186	9747281	reg1029815.p1	3.579	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	-35429	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-98277	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-147597	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	136662	-	TSC_hg19_v1_chr1_-_9884023 AK304813	136788	-	TSC_hg19_v1_chr1_-_9884024 BC033902	136811	-	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1	0.0	
chr2	61225900	61226035	reg1004808.p1	3.579	+	TSC_hg19_v1_chr2_+_61108776 BC143885 BC117191 X75042	-117180	+	TSC_hg19_v1_chr2_+_61108741 BC051005 NM_002908	-117230	+	TSC_hg19_v1_chr2_+_61108702 AK303926	-117262	+	TSC_hg19_v1_chr2_-_61244326 AK291729 BC065197	18350	-	AK311426 NM_002618 TSC_hg19_v1_chr2_+_61244828	18802	+	TSC_hg19_v1_chr2_+_61244858 AK315244 AB022192 AF048755 BC067090 BC020547 BC040953 BC048804 BC035584 AB528913 CU688242 U71374	18907	+	BC143885|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC117191|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##X75042|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##BC051005|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##NM_002908|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##AK303926|REL|5966|v-rel reticuloendotheliosis viral oncogene homolog (avian)##AK291729|PUS10|150962|pseudouridylate synthase 10##NM_002618|PEX13|5194|peroxisomal biogenesis factor 13##AK315244|PEX13|5194|peroxisomal biogenesis factor 13##AB022192|PEX13|5194|peroxisomal biogenesis factor 13##AF048755|PEX13|5194|peroxisomal biogenesis factor 13##BC067090|PEX13|5194|peroxisomal biogenesis factor 13##U71374|PEX13|5194|peroxisomal biogenesis factor 13	0.0	
chr5	20555282	20555408	reg1046591.p1	3.579	+	AK295087 BC031051 NM_001167667 NM_004934	-567023	-	TSC_hg19_v1_chr5_+_17217804 AF039656	-3337505	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-3337733	+	TSC_hg19_v1_chr5_+_21459621 AK290693	904264	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	904303	+	TSC_hg19_v1_chr5_-_22212879 AK314800	1657536	-	AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK314800|CDH12|1010|cadherin 12, type 2 (N-cadherin 2)	0.739819	CTCF.p2:-4:0.740
chr5	55711387	55711537	reg1037915.p2	3.579	+	AK123389 NM_024669	-182277	-	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-420699	-	NM_001242636 NM_001242639	-562313	+	NM_005921	399437	+	TSC_hg19_v1_chr5_+_56111375 AK307828	399902	+	TSC_hg19_v1_chr5_+_56111395 AF042838	399956	+	AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AF042838|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr7	128948102	128948282	reg1042551.p2	3.579	+	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	-83363	+	BC009989 NM_005631	-119480	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-252987	-	TSC_hg19_v1_chr7_+_129007981 NM_001130723	59794	+	TSC_hg19_v1_chr7_+_129008062 AK025372	59896	+	AK316073 NM_001130722	67291	+	NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2##AK316073|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130722|AHCYL2|23382|adenosylhomocysteinase-like 2	0.0	
chr8	141678645	141678763	reg1008416.p2	3.579	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-33080	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-157141	+	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	-157312	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	332552	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	460033	+	AK128212 NM_001080431	559968	-	BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4	0.0	
chr9	129811506	129811637	reg1031669.p2	3.579	+	AF221098 NM_001190728 AB385313 CU689706	-87036	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	-134467	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	-188627	+	AK075026 TSC_hg19_v1_chr9_-_129870392	58781	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	73337	-	TSC_hg19_v1_chr9_-_129884962 AK312876	73391	-	AF221098|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190728|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AK075026|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2	0.0	
chr11	65709240	65709307	reg1040612.p2	3.578	+	TSC_hg19_v1_chr11_+_65686920 BC010025 AB463581 CU679579 EU446936 X96506	-22314	+	NM_006442 TSC_hg19_v1_chr11_+_65686745	-22534	+	AF073483 TSC_hg19_v1_chr11_-_65686528 BC013185 NM_001135635 NM_031450	-22775	-	AK057442 BC104021 BC104022 BC104023 NM_152762	3841	+	NM_005146 TSC_hg19_v1_chr11_+_65729203 AK223016 AK293200 AK297589 AK309104 AK298184 BC001058 AB006198 AF353625 DQ891694 EU176645 BT006637 Y14314	19996	+	TSC_hg19_v1_chr11_+_65769409 AF068235 NM_001143985 NM_003860	60206	+	BC010025|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##EU446936|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##X96506|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##NM_006442|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##AF073483|C11orf68|83638|chromosome 11 open reading frame 68##BC013185|C11orf68|83638|chromosome 11 open reading frame 68##NM_001135635|C11orf68|83638|chromosome 11 open reading frame 68##NM_031450|C11orf68|83638|chromosome 11 open reading frame 68##AK057442|TSGA10IP|254187|testis specific, 10 interacting protein##BC104021|TSGA10IP|254187|testis specific, 10 interacting protein##BC104022|TSGA10IP|254187|testis specific, 10 interacting protein##BC104023|TSGA10IP|254187|testis specific, 10 interacting protein##NM_152762|TSGA10IP|254187|testis specific, 10 interacting protein##NM_005146|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK223016|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK293200|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK297589|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK298184|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BC001058|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AB006198|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AF353625|SART1|9092|squamous cell carcinoma antigen recognized by T cells##DQ891694|SART1|9092|squamous cell carcinoma antigen recognized by T cells##EU176645|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BT006637|SART1|9092|squamous cell carcinoma antigen recognized by T cells##Y14314|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AF068235|BANF1|8815|barrier to autointegration factor 1##NM_001143985|BANF1|8815|barrier to autointegration factor 1##NM_003860|BANF1|8815|barrier to autointegration factor 1	0.0	
chr1	207258351	207258466	reg1000943.p2	3.578	+	AK292883 TSC_hg19_v1_chr1_+_207226619 NM_001018053 NM_006212 AJ005578 AF470623 AB044805 BC112103 BC112105 BC069350 BC069385 BC069583 BC069586 BC069600 BC075075 BC075076	-31771	+	TSC_hg19_v1_chr1_-_207224335 AL833081 BC137166 BC137167 NM_018566	-34049	-	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	-52360	-	NM_001017365 NM_001017366	3803	+	BC005378 NM_000716 NM_001017364 L11245 NM_001017367 AK315137	4213	+	TSC_hg19_v1_chr1_+_207277658 BC022312 NM_000715 AK303798 AK313164 M31452 AK303793	19241	+	AK292883|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_001018053|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##NM_006212|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AJ005578|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AF470623|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AB044805|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112103|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC112105|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069350|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069385|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069583|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069586|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC069600|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075075|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##BC075076|PFKFB2|5208|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2##AL833081|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137166|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC137167|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##NM_018566|YOD1|55432|YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)##BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116##NM_001017365|C4BPB|725|complement component 4 binding protein, beta##NM_001017366|C4BPB|725|complement component 4 binding protein, beta##BC005378|C4BPB|725|complement component 4 binding protein, beta##NM_000716|C4BPB|725|complement component 4 binding protein, beta##NM_001017364|C4BPB|725|complement component 4 binding protein, beta##L11245|C4BPB|725|complement component 4 binding protein, beta##NM_001017367|C4BPB|725|complement component 4 binding protein, beta##AK315137|C4BPB|725|complement component 4 binding protein, beta##BC022312|C4BPA|722|complement component 4 binding protein, alpha##NM_000715|C4BPA|722|complement component 4 binding protein, alpha##AK303798|C4BPA|722|complement component 4 binding protein, alpha##AK313164|C4BPA|722|complement component 4 binding protein, alpha##M31452|C4BPA|722|complement component 4 binding protein, alpha##AK303793|C4BPA|722|complement component 4 binding protein, alpha	0.0	
chr16	12667511	12667692	reg1012566.p1	3.578	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-597028	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-608517	+	NM_001130007	-657083	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	230050	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	230118	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	327867	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr19	1668838	1668943	reg1033871.p2	3.578	+	M31222 NM_003200 TSC_hg19_v1_chr19_-_1652346	-16551	-	AB385055 BC110579 BC110580 M31523 NM_001136139	-18625	-	TSC_hg19_v1_chr19_-_1605464 NM_006830	-63417	-	NM_001080488 TSC_hg19_v1_chr19_+_1753823	84862	+	TSC_hg19_v1_chr19_+_1776120 AK074606	107297	+	AY302538 NM_001178002 TSC_hg19_v1_chr19_-_1812276 BC035162 NM_138813 AK125225 AK125969	143347	-	M31222|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_003200|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##BC110580|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##M31523|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_001136139|TCF3|6929|transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)##NM_006830|UQCR11|10975|ubiquinol-cytochrome c reductase, complex III subunit XI##NM_001080488|ONECUT3|390874|one cut homeobox 3##AY302538|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_001178002|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##BC035162|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##NM_138813|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125225|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3##AK125969|ATP8B3|148229|ATPase, aminophospholipid transporter, class I, type 8B, member 3	0.0	
chr19	51307764	51307850	reg1019944.p1	3.578	+	AB463389 NM_033068	-14136	+	BC095544 BC067453 BC067454 NM_001506	-34019	+	TSC_hg19_v1_chr19_+_51226662 AY870345 AB009244 AB528595 BT019673 CU675163	-81085	+	TSC_hg19_v1_chr19_-_51307892 NM_199250 NM_199249	112	-	BT007253 S77952 DQ893072 DQ896328 AY703451 BC005313 M25629 X13561 AK293363 AY429508 NM_002257	19215	-	AY373373 AY373374 CU686842 CU686864 HQ258133 BC126137 BC144045 BC144046 BC144047 AF303046 BC069480 BC069507 BC069518 NM_017509 NM_138563 NM_138564	26955	-	NM_033068|ACPT|93650|acid phosphatase, testicular##BC095544|GPR32|2854|G protein-coupled receptor 32##BC067453|GPR32|2854|G protein-coupled receptor 32##BC067454|GPR32|2854|G protein-coupled receptor 32##NM_001506|GPR32|2854|G protein-coupled receptor 32##AY870345|CLEC11A|6320|C-type lectin domain family 11, member A##AB009244|CLEC11A|6320|C-type lectin domain family 11, member A##BT019673|CLEC11A|6320|C-type lectin domain family 11, member A##NM_199250|C19orf48|84798|chromosome 19 open reading frame 48##NM_199249|C19orf48|84798|chromosome 19 open reading frame 48##BT007253|KLK1|3816|kallikrein 1##S77952|KLK1|3816|kallikrein 1##DQ893072|KLK1|3816|kallikrein 1##DQ896328|KLK1|3816|kallikrein 1##AY703451|KLK1|3816|kallikrein 1##BC005313|KLK1|3816|kallikrein 1##M25629|KLK1|3816|kallikrein 1##X13561|KLK1|3816|kallikrein 1##AY429508|KLK1|3816|kallikrein 1##NM_002257|KLK1|3816|kallikrein 1##AY373373|KLK15|55554|kallikrein-related peptidase 15##AY373374|KLK15|55554|kallikrein-related peptidase 15##HQ258133|KLK15|55554|kallikrein-related peptidase 15##BC126137|KLK15|55554|kallikrein-related peptidase 15##BC144045|KLK15|55554|kallikrein-related peptidase 15##BC144046|KLK15|55554|kallikrein-related peptidase 15##BC144047|KLK15|55554|kallikrein-related peptidase 15##AF303046|KLK15|55554|kallikrein-related peptidase 15##BC069480|KLK15|55554|kallikrein-related peptidase 15##BC069507|KLK15|55554|kallikrein-related peptidase 15##BC069518|KLK15|55554|kallikrein-related peptidase 15##NM_017509|KLK15|55554|kallikrein-related peptidase 15##NM_138563|KLK15|55554|kallikrein-related peptidase 15##NM_138564|KLK15|55554|kallikrein-related peptidase 15	0.0	
chr19	7982832	7982922	reg1041478.p2	3.578	+	NM_001195259	-1846	+	TSC_hg19_v1_chr19_+_7968825 AB528941 AF014401 DQ445915 DQ891274 DQ894462	-14053	+	TSC_hg19_v1_chr19_+_7968788 AF022805 BC005365	-14091	+	NM_003083 AK314878 U44755 AK222926 U44898 BC011868 CU680088 AB527480 EU446617 EU446902	2344	+	TSC_hg19_v1_chr19_+_7985899 BX647416	3032	+	TSC_hg19_v1_chr19_-_7991004 BC062702 AK098834 NM_206833	8139	-	NM_001195259|LOC100507588|100507588|uncharacterized LOC100507588##AF014401|MAP2K7|5609|mitogen-activated protein kinase kinase 7##DQ445915|MAP2K7|5609|mitogen-activated protein kinase kinase 7##DQ891274|MAP2K7|5609|mitogen-activated protein kinase kinase 7##DQ894462|MAP2K7|5609|mitogen-activated protein kinase kinase 7##AF022805|MAP2K7|5609|mitogen-activated protein kinase kinase 7##BC005365|MAP2K7|5609|mitogen-activated protein kinase kinase 7##NM_003083|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##AK314878|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##U44755|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##AK222926|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##U44898|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##BC011868|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##EU446617|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##EU446902|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##BX647416|SNAPC2|6618|small nuclear RNA activating complex, polypeptide 2, 45kDa##BC062702|CTXN1|404217|cortexin 1##AK098834|CTXN1|404217|cortexin 1##NM_206833|CTXN1|404217|cortexin 1	0.050596	
chr21	39073234	39073307	reg1013016.p2	3.578	+	NM_130438 NM_001396 U52373 D85759 U58496	-280650	+	D86550 NM_130436	-282064	+	AF108830 NM_101395 AB015283 AB015284	-333400	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	215441	-	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	420131	-	BC013327 NM_002243	555393	+	NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AF108830|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_101395|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015283|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##AB015284|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.0	
chr22	21996185	21996318	reg1032874.p2	3.578	+	TSC_hg19_v1_chr22_+_21987057 AK302030 AK093365 AX748079 BC033499 NM_152612	-9225	+	TSC_hg19_v1_chr22_-_21984367 BC133043 BC133047	-11851	-	TSC_hg19_v1_chr22_-_21984304 BC064568 BC053663 BC017281 BC110075 BC110799 BC057814 NM_001017964 BC096754	-11936	-	NM_022044 BC132849 BC132851 TSC_hg19_v1_chr22_+_21996560	302	+	TSC_hg19_v1_chr22_+_21996575 AY359118	323	+	TSC_hg19_v1_chr22_+_21996608 BC006248 AB043007	350	+	AK302030|CCDC116|164592|coiled-coil domain containing 116##AK093365|CCDC116|164592|coiled-coil domain containing 116##BC033499|CCDC116|164592|coiled-coil domain containing 116##NM_152612|CCDC116|164592|coiled-coil domain containing 116##BC133043|YDJC|150223|YdjC homolog (bacterial)##BC133047|YDJC|150223|YdjC homolog (bacterial)##BC064568|YDJC|150223|YdjC homolog (bacterial)##BC053663|YDJC|150223|YdjC homolog (bacterial)##BC017281|YDJC|150223|YdjC homolog (bacterial)##BC110075|YDJC|150223|YdjC homolog (bacterial)##BC110799|YDJC|150223|YdjC homolog (bacterial)##BC057814|YDJC|150223|YdjC homolog (bacterial)##NM_001017964|YDJC|150223|YdjC homolog (bacterial)##BC096754|YDJC|150223|YdjC homolog (bacterial)##NM_022044|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC132849|SDF2L1|23753|stromal cell-derived factor 2-like 1##BC132851|SDF2L1|23753|stromal cell-derived factor 2-like 1##AY359118|SDF2L1|23753|stromal cell-derived factor 2-like 1##AB043007|SDF2L1|23753|stromal cell-derived factor 2-like 1	0.0	
chr5	116002934	116003050	reg1040282.p2	3.578	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-92478	-	TSC_hg19_v1_chr5_+_115898220 D28352	-104768	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-582271	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2321246	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2403819	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2404173	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr9	37403148	37403214	reg1037434.p2	3.578	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-282598	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-282673	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-282695	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	19525	+	BC010007 TSC_hg19_v1_chr9_-_37465267	62079	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	62214	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.0	
chr11	64839428	64839592	reg1032579.p1	3.577	+	AB527189 TSC_hg19_v1_chr11_-_64826007 AJ012371 NM_005468 BC143643 BC143644	-13508	-	TSC_hg19_v1_chr11_+_64808404 BC007448 U79266	-31092	+	NM_013299 TSC_hg19_v1_chr11_+_64808377	-31129	+	DQ893251 DQ896580 TSC_hg19_v1_chr11_-_64851515 BC011000 AK291490	11990	-	TSC_hg19_v1_chr11_-_64851564 NM_080668	12075	-	TSC_hg19_v1_chr11_+_64851693 NM_006782 AF030291 AF001891 AK295279 AK316044 AK291964 AK308740	12196	+	AJ012371|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##NM_005468|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC143643|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC143644|NAALADL1|10004|N-acetylated alpha-linked acidic dipeptidase-like 1##BC007448|SAC3D1|29901|SAC3 domain containing 1##U79266|SAC3D1|29901|SAC3 domain containing 1##NM_013299|SAC3D1|29901|SAC3 domain containing 1##DQ893251|CDCA5|113130|cell division cycle associated 5##DQ896580|CDCA5|113130|cell division cycle associated 5##BC011000|CDCA5|113130|cell division cycle associated 5##AK291490|CDCA5|113130|cell division cycle associated 5##NM_080668|CDCA5|113130|cell division cycle associated 5##NM_006782|ZFPL1|7542|zinc finger protein-like 1##AF030291|ZFPL1|7542|zinc finger protein-like 1##AF001891|ZFPL1|7542|zinc finger protein-like 1##AK295279|ZFPL1|7542|zinc finger protein-like 1##AK316044|ZFPL1|7542|zinc finger protein-like 1##AK291964|ZFPL1|7542|zinc finger protein-like 1##AK308740|ZFPL1|7542|zinc finger protein-like 1	0.0	
chr1	182396199	182396379	reg1038914.p1	3.577	+	AJ515384 NM_172000	-26539	-	TSC_hg19_v1_chr1_-_182361366 AK122784 NM_001033044 NM_002065	-34949	-	TSC_hg19_v1_chr1_-_182360928 AY947343 BC018992 BC011700 X59834 BC010037 BC011852 Y00387 BC051726 BX537384	-35354	-	NM_001137669 AK302768 BC142944 AL136902	22984	+	AK315231 BC090934 TSC_hg19_v1_chr1_-_182558392 CR627369 NM_021133	162094	-	CU675308 TSC_hg19_v1_chr1_+_182569465	173157	+	AJ515384|TEDDM1|127670|transmembrane epididymal protein 1##NM_172000|TEDDM1|127670|transmembrane epididymal protein 1##AK122784|GLUL|2752|glutamate-ammonia ligase##NM_001033044|GLUL|2752|glutamate-ammonia ligase##NM_002065|GLUL|2752|glutamate-ammonia ligase##AY947343|GLUL|2752|glutamate-ammonia ligase##BC018992|GLUL|2752|glutamate-ammonia ligase##BC011700|GLUL|2752|glutamate-ammonia ligase##X59834|GLUL|2752|glutamate-ammonia ligase##BC010037|GLUL|2752|glutamate-ammonia ligase##BC011852|GLUL|2752|glutamate-ammonia ligase##Y00387|GLUL|2752|glutamate-ammonia ligase##BC051726|GLUL|2752|glutamate-ammonia ligase##BX537384|GLUL|2752|glutamate-ammonia ligase##NM_001137669|RGSL1|353299|regulator of G-protein signaling like 1##AK302768|RGSL1|353299|regulator of G-protein signaling like 1##BC142944|RGSL1|353299|regulator of G-protein signaling like 1##AL136902|RGSL1|353299|regulator of G-protein signaling like 1##AK315231|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##BC090934|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##CR627369|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)##NM_021133|RNASEL|6041|ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)	0.0	
chr12	129283430	129283568	reg1028431.p2	3.577	+	NM_001136103	-531552	+	NM_052907	-3472338	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-3733431	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	24944	-	BC043528 TSC_hg19_v1_chr12_+_129337985	54485	+	TSC_hg19_v1_chr12_+_129338057 AK056540 NM_144669 CU692172	54588	+	NM_001136103|TMEM132C|92293|transmembrane protein 132C##NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1##AK056540|GLT1D1|144423|glycosyltransferase 1 domain containing 1##NM_144669|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.0	
chr12	57024140	57024252	reg1033371.p1	3.577	+	AK023842 TSC_hg19_v1_chr12_-_57024088	-154	-	AK023830 TSC_hg19_v1_chr12_-_57009380	-14820	-	AF000422 TSC_hg19_v1_chr12_-_57006969	-17280	-	TSC_hg19_v1_chr12_-_57030136 AK303327 CR749379 NM_013449	5930	-	TSC_hg19_v1_chr12_-_57039769 CU677643 DQ891585 DQ894779 BC010111 AB489161 BC016512 AK291085	15559	-	TSC_hg19_v1_chr12_-_57039785 NM_001686	15630	-	AK023842|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK023830|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AF000422|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##AK303327|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##CR749379|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##NM_013449|BAZ2A|11176|bromodomain adjacent to zinc finger domain, 2A##DQ891585|ATP5B|506|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide##DQ894779|ATP5B|506|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide##BC016512|ATP5B|506|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide##AK291085|ATP5B|506|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide##NM_001686|ATP5B|506|ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide	0.0	
chr12	58087877	58088000	reg1021227.p2	3.577	+	NM_001017956 NM_001017957 NM_001017958 NM_006812 AK303291 AK291374 TSC_hg19_v1_chr12_+_58087929 AB002806 AK129781 AK293435 AK294870 AK130733 AK296770 AK298532 AK303858 AK304533 BC000532 BC007254 BC023513 AB590116 CR456791 CU674262 CU675585 DQ892759 DQ896004	-98	+	TSC_hg19_v1_chr12_-_58026955 AB209460 AK289690 BC029828 NM_001478 AK299845	-60994	-	M83651 TSC_hg19_v1_chr12_-_58026719	-61273	-	TSC_hg19_v1_chr12_+_58120054 AK301303 BC069024 BC098453 BC039697 BC019026	32130	+	AY128689 NM_001122772	44090	-	AF413077 BC028020 AK292672 AF384128 D79989 NM_014770	47960	-	NM_001017956|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##NM_001017957|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##NM_001017958|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##NM_006812|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK303291|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK291374|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AB002806|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK129781|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK293435|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK294870|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK130733|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK296770|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK298532|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK303858|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AK304533|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##BC000532|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##BC007254|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##BC023513|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##CR456791|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##DQ892759|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##DQ896004|OS9|10956|osteosarcoma amplified 9, endoplasmic reticulum lectin##AB209460|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK289690|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##BC029828|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##NM_001478|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK299845|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##M83651|B4GALNT1|2583|beta-1,4-N-acetyl-galactosaminyl transferase 1##AK301303|LOC100130776|100130776|uncharacterized LOC100130776##BC069024|LOC100130776|100130776|uncharacterized LOC100130776##BC039697|LOC100130776|100130776|uncharacterized LOC100130776##BC019026|LOC100130776|100130776|uncharacterized LOC100130776##AY128689|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##NM_001122772|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##AF413077|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##BC028020|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##AK292672|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##AF384128|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##D79989|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2##NM_014770|AGAP2|116986|ArfGAP with GTPase domain, ankyrin repeat and PH domain 2	0.01069	
chr12	7341911	7342092	reg1019676.p3	3.577	+	AK292256 NM_001131026	-243	+	TSC_hg19_v1_chr12_+_7282990 AK316059 NM_014718 AJ277460 BC111491 AK299177 BC104767 BC112283 AB527393 BC148258	-58877	+	DQ892613 DQ895853 AY007436 AF212239 NM_031491 AK311977 AK096947 AK223378 BC029355	-60571	-	TSC_hg19_v1_chr12_+_7342306 Z48054 AK299105 NM_001131023 NM_001131024 NM_001131025 AK302742 AK225126 AK312317 AK316250 AK303515	353	+	BC010621 X84899 NM_000319 U19721 AB527550 DQ891142 DQ894321 CU679763	963	+	NM_001080454	114926	+	AK292256|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131026|PEX5|5830|peroxisomal biogenesis factor 5##AK316059|CLSTN3|9746|calsyntenin 3##NM_014718|CLSTN3|9746|calsyntenin 3##AJ277460|CLSTN3|9746|calsyntenin 3##BC111491|CLSTN3|9746|calsyntenin 3##AK299177|CLSTN3|9746|calsyntenin 3##BC104767|CLSTN3|9746|calsyntenin 3##BC112283|CLSTN3|9746|calsyntenin 3##BC148258|CLSTN3|9746|calsyntenin 3##DQ892613|RBP5|83758|retinol binding protein 5, cellular##DQ895853|RBP5|83758|retinol binding protein 5, cellular##AY007436|RBP5|83758|retinol binding protein 5, cellular##AF212239|RBP5|83758|retinol binding protein 5, cellular##NM_031491|RBP5|83758|retinol binding protein 5, cellular##AK311977|RBP5|83758|retinol binding protein 5, cellular##AK096947|RBP5|83758|retinol binding protein 5, cellular##AK223378|RBP5|83758|retinol binding protein 5, cellular##BC029355|RBP5|83758|retinol binding protein 5, cellular##Z48054|PEX5|5830|peroxisomal biogenesis factor 5##AK299105|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131023|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131024|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131025|PEX5|5830|peroxisomal biogenesis factor 5##AK302742|PEX5|5830|peroxisomal biogenesis factor 5##AK225126|PEX5|5830|peroxisomal biogenesis factor 5##AK312317|PEX5|5830|peroxisomal biogenesis factor 5##AK316250|PEX5|5830|peroxisomal biogenesis factor 5##AK303515|PEX5|5830|peroxisomal biogenesis factor 5##BC010621|PEX5|5830|peroxisomal biogenesis factor 5##X84899|PEX5|5830|peroxisomal biogenesis factor 5##NM_000319|PEX5|5830|peroxisomal biogenesis factor 5##U19721|PEX5|5830|peroxisomal biogenesis factor 5##DQ891142|PEX5|5830|peroxisomal biogenesis factor 5##DQ894321|PEX5|5830|peroxisomal biogenesis factor 5##NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4	0.0	
chr13	75257694	75257821	reg1039789.p1	3.577	+	TSC_hg19_v1_chr13_-_74708425 AK291397	-549361	-	AF161471 AF113122 NM_007249	-549768	-	TSC_hg19_v1_chr13_+_73633142 AK296900 NM_001730 AK304284 BC007695 AF287272 BC014302 AB030824 BC042131	-1624553	+	CR749622 TSC_hg19_v1_chr13_-_75901948	644165	-	TSC_hg19_v1_chr13_-_76056306 AB449885 AB463305 FM207106 FM207107 BC151239 AB011175 NM_014832 AK307493	798581	-	AY542161 HQ258699 BC110837 TSC_hg19_v1_chr13_-_76111978 BX538116 AF169971 AK000009 BC117391 BC143912 BC171758 NM_203495 NM_203497	854221	-	AK291397|KLF12|11278|Kruppel-like factor 12##AF161471|KLF12|11278|Kruppel-like factor 12##AF113122|KLF12|11278|Kruppel-like factor 12##NM_007249|KLF12|11278|Kruppel-like factor 12##AK296900|KLF5|688|Kruppel-like factor 5 (intestinal)##NM_001730|KLF5|688|Kruppel-like factor 5 (intestinal)##AK304284|KLF5|688|Kruppel-like factor 5 (intestinal)##BC007695|KLF5|688|Kruppel-like factor 5 (intestinal)##AF287272|KLF5|688|Kruppel-like factor 5 (intestinal)##BC014302|KLF5|688|Kruppel-like factor 5 (intestinal)##AB030824|KLF5|688|Kruppel-like factor 5 (intestinal)##BC042131|KLF5|688|Kruppel-like factor 5 (intestinal)##CR749622|TBC1D4|9882|TBC1 domain family, member 4##AB449885|TBC1D4|9882|TBC1 domain family, member 4##FM207106|TBC1D4|9882|TBC1 domain family, member 4##FM207107|TBC1D4|9882|TBC1 domain family, member 4##BC151239|TBC1D4|9882|TBC1 domain family, member 4##AB011175|TBC1D4|9882|TBC1 domain family, member 4##NM_014832|TBC1D4|9882|TBC1 domain family, member 4##AK307493|TBC1D4|9882|TBC1 domain family, member 4##AY542161|COMMD6|170622|COMM domain containing 6##HQ258699|COMMD6|170622|COMM domain containing 6##BC110837|COMMD6|170622|COMM domain containing 6##BX538116|COMMD6|170622|COMM domain containing 6##AF169971|COMMD6|170622|COMM domain containing 6##AK000009|COMMD6|170622|COMM domain containing 6##BC117391|COMMD6|170622|COMM domain containing 6##BC143912|COMMD6|170622|COMM domain containing 6##BC171758|COMMD6|170622|COMM domain containing 6##NM_203495|COMMD6|170622|COMM domain containing 6##NM_203497|COMMD6|170622|COMM domain containing 6	0.649912	CTCF.p2:-5:0.650
chr15	56066703	56066821	reg1032301.p2	3.577	+	AY630258 NM_173814 TSC_hg19_v1_chr15_-_56035276	-31536	-	AF457207 NM_015617	-185713	-	EF625686 TSC_hg19_v1_chr15_-_55880544	-186230	-	BC136605 BC144284 BC144285 AL832063 NM_198400	142554	-	TSC_hg19_v1_chr15_-_56285776 BC035707 AK304394 AY550969 BC152452 BC152562 D42055 NM_006154	219033	-	TSC_hg19_v1_chr15_-_56388663 AL832584	321935	-	AY630258|PRTG|283659|protogenin##NM_173814|PRTG|283659|protogenin##AF457207|PYGO1|26108|pygopus homolog 1 (Drosophila)##NM_015617|PYGO1|26108|pygopus homolog 1 (Drosophila)##EF625686|PYGO1|26108|pygopus homolog 1 (Drosophila)##BC136605|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144284|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC144285|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832063|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_198400|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC035707|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AK304394|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AY550969|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152452|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##BC152562|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##D42055|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##NM_006154|NEDD4|4734|neural precursor cell expressed, developmentally down-regulated 4##AL832584|RFX7|64864|regulatory factor X, 7	0.0	
chr15	70307338	70307475	reg1022726.p1	3.577	+	TSC_hg19_v1_chr15_+_69745157 NM_001003 NM_213725 AK130958 AK311456 AK026579 D28366 M17886 AY303789 BC003369 BC007590 AB529036 CU678440 CR450339 CR542209	-562185	+	TSC_hg19_v1_chr15_-_69707358 AK056793	-600044	-	TSC_hg19_v1_chr15_+_69706687 AK310402 EU176620	-600660	+	BC015421 TSC_hg19_v1_chr15_-_70341948	34503	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	82821	-	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	82837	-	NM_001003|RPLP1|6176|ribosomal protein, large, P1##NM_213725|RPLP1|6176|ribosomal protein, large, P1##AK130958|RPLP1|6176|ribosomal protein, large, P1##AK026579|RPLP1|6176|ribosomal protein, large, P1##D28366|RPLP1|6176|ribosomal protein, large, P1##M17886|RPLP1|6176|ribosomal protein, large, P1##AY303789|RPLP1|6176|ribosomal protein, large, P1##BC003369|RPLP1|6176|ribosomal protein, large, P1##BC007590|RPLP1|6176|ribosomal protein, large, P1##CR450339|RPLP1|6176|ribosomal protein, large, P1##CR542209|RPLP1|6176|ribosomal protein, large, P1##AK056793|LOC145694|145694|uncharacterized LOC145694##AK310402|KIF23|9493|kinesin family member 23##EU176620|KIF23|9493|kinesin family member 23##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)	0.0	
chr18	44203125	44203233	reg1040306.p1	3.577	+	BC041860 AK302484 NM_001145472	-63919	-	AK057232 BC047720 NM_001145473 NM_001173129	-104139	-	AK091537 AK122819 AK127467 AX747044 NM_152470	-288993	+	NM_144612	33816	-	TSC_hg19_v1_chr18_-_44337014 AK094273 NM_013305 AK056270	133882	-	AB527541 AF077953 AF077954 DQ896421 EU176432 TSC_hg19_v1_chr18_-_44497471 AK308143 BC111060 BC015190 AK294801 NM_004671 NM_173206	294234	-	BC041860|LOXHD1|125336|lipoxygenase homology domains 1##AK302484|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145472|LOXHD1|125336|lipoxygenase homology domains 1##AK057232|LOXHD1|125336|lipoxygenase homology domains 1##BC047720|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145473|LOXHD1|125336|lipoxygenase homology domains 1##NM_001173129|LOXHD1|125336|lipoxygenase homology domains 1##AK091537|RNF165-IT1|147341|RNF165 intronic transcript 1 (non-protein coding)##AK122819|RNF165|494470|ring finger protein 165##AK127467|RNF165|494470|ring finger protein 165##NM_152470|RNF165|494470|ring finger protein 165##NM_144612|LOXHD1|125336|lipoxygenase homology domains 1##AK094273|ST8SIA5|29906|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5##NM_013305|ST8SIA5|29906|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5##AK056270|ST8SIA5|29906|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5##AF077953|PIAS2|9063|protein inhibitor of activated STAT, 2##AF077954|PIAS2|9063|protein inhibitor of activated STAT, 2##DQ896421|PIAS2|9063|protein inhibitor of activated STAT, 2##EU176432|PIAS2|9063|protein inhibitor of activated STAT, 2##AK308143|PIAS2|9063|protein inhibitor of activated STAT, 2##BC111060|PIAS2|9063|protein inhibitor of activated STAT, 2##BC015190|PIAS2|9063|protein inhibitor of activated STAT, 2##AK294801|PIAS2|9063|protein inhibitor of activated STAT, 2##NM_004671|PIAS2|9063|protein inhibitor of activated STAT, 2##NM_173206|PIAS2|9063|protein inhibitor of activated STAT, 2	0.977327	CTCF.p2:-17:0.977
chr20	17806965	17807071	reg1036954.p1	3.577	+	BC054871 NM_001014977 NM_178477 BC062735	-126420	+	NM_001159495	-132699	+	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	-144135	-	BT007191 AB464237 TSC_hg19_v1_chr20_-_17949155 AK223308 AK001793 AK129505 NM_014426 BC093623 BC093980 BC143274	142196	-	TSC_hg19_v1_chr20_-_17949438 BC002724 BC062638 BC064555 BC073171 AK123903 AK308017 AK296947 BC000100 AF121855 NM_152227	142422	-	TSC_hg19_v1_chr20_+_17949742 AF306686 AK315532 AF306684 AF306685 AK027503 BC016869 NM_052865	142644	+	BC054871|BANF2|140836|barrier to autointegration factor 2##NM_001014977|BANF2|140836|barrier to autointegration factor 2##NM_178477|BANF2|140836|barrier to autointegration factor 2##BC062735|BANF2|140836|barrier to autointegration factor 2##NM_001159495|BANF2|140836|barrier to autointegration factor 2##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BT007191|SNX5|27131|sorting nexin 5##AK223308|SNX5|27131|sorting nexin 5##AK001793|SNX5|27131|sorting nexin 5##AK129505|SNX5|27131|sorting nexin 5##NM_014426|SNX5|27131|sorting nexin 5##BC093623|SNX5|27131|sorting nexin 5##BC093980|SNX5|27131|sorting nexin 5##BC143274|SNX5|27131|sorting nexin 5##BC002724|SNX5|27131|sorting nexin 5##BC062638|SNX5|27131|sorting nexin 5##AK123903|SNX5|27131|sorting nexin 5##AK308017|SNX5|27131|sorting nexin 5##AK296947|SNX5|27131|sorting nexin 5##BC000100|SNX5|27131|sorting nexin 5##AF121855|SNX5|27131|sorting nexin 5##NM_152227|SNX5|27131|sorting nexin 5##AF306686|C20orf72|92667|chromosome 20 open reading frame 72##AK315532|C20orf72|92667|chromosome 20 open reading frame 72##AF306684|C20orf72|92667|chromosome 20 open reading frame 72##AF306685|C20orf72|92667|chromosome 20 open reading frame 72##AK027503|C20orf72|92667|chromosome 20 open reading frame 72##BC016869|C20orf72|92667|chromosome 20 open reading frame 72##NM_052865|C20orf72|92667|chromosome 20 open reading frame 72	0.0	
chr2	202725556	202725737	reg1002299.p2	3.577	+	AB053308 AX772791 NM_139158 AK131512 BX647394 BC038807 EU831752 EU831828	-54354	+	NM_001135745 NM_020919	-79752	-	TSC_hg19_v1_chr2_-_202645657 BC071576 AB053305 AB053306 AF391100 AK023024 BC029174 AK291029	-79981	-	AB017365 NM_003507 AB010881 BC015915 CU677505	173693	+	X99586 TSC_hg19_v1_chr2_-_203103288 U38784 U67122 BC053528 AK311840 BC005899 AB062294 BC066306 BC006462 U83117 U61397 NM_001005781 NM_001005782 NM_003352	377622	-	TSC_hg19_v1_chr2_+_203130458 AK300844 AK307396 AL117554 BC001707	404810	+	AB053308|CDK15|65061|cyclin-dependent kinase 15##AX772791|CDK15|65061|cyclin-dependent kinase 15##NM_139158|CDK15|65061|cyclin-dependent kinase 15##AK131512|CDK15|65061|cyclin-dependent kinase 15##BX647394|CDK15|65061|cyclin-dependent kinase 15##BC038807|CDK15|65061|cyclin-dependent kinase 15##EU831752|CDK15|65061|cyclin-dependent kinase 15##EU831828|CDK15|65061|cyclin-dependent kinase 15##NM_001135745|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##NM_020919|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##BC071576|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053305|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB053306|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AF391100|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AK023024|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##BC029174|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AK291029|ALS2|57679|amyotrophic lateral sclerosis 2 (juvenile)##AB017365|FZD7|8324|frizzled family receptor 7##NM_003507|FZD7|8324|frizzled family receptor 7##AB010881|FZD7|8324|frizzled family receptor 7##BC015915|FZD7|8324|frizzled family receptor 7##X99586|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U38784|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U67122|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC053528|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK311840|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC005899|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AB062294|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC066306|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##BC006462|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U83117|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##U61397|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005781|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_001005782|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##NM_003352|SUMO1|7341|SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)##AK300844|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AK307396|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##AL117554|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)##BC001707|NOP58|51602|NOP58 ribonucleoprotein homolog (yeast)	0.0	
chr4	147045408	147045576	reg1032993.p2	3.577	+	BC033879 TSC_hg19_v1_chr4_-_146859976	-185524	-	TSC_hg19_v1_chr4_-_146859580 AK091130 AX746796 NM_178835 BC117407 BC143577 AF450485 AK225805	-185815	-	NM_001080531	-444137	+	NM_007080 TSC_hg19_v1_chr4_+_147096887 BC016026 BC019894 AJ238098 AF182292 AK312126	51375	+	AM392861 BC146684 CU687734 DQ122860 DQ122861 DQ871036 EU831657 EU831663 EU831740 EU831744 CR936751 BC120970 BC120971 BC127626 BC127627 BC148252 AK291046 BC063471 AL136728 TSC_hg19_v1_chr4_-_147443093 BC023288 AY346324 BC150308 CR933647 NM_001029998 NM_032128	397504	-	TSC_hg19_v1_chr4_+_147560044 AK314982 NM_004575 U06233 BC136344 BC136345	514599	+	AK091130|ZNF827|152485|zinc finger protein 827##NM_178835|ZNF827|152485|zinc finger protein 827##BC117407|ZNF827|152485|zinc finger protein 827##BC143577|ZNF827|152485|zinc finger protein 827##AF450485|ZNF827|152485|zinc finger protein 827##AK225805|ZNF827|152485|zinc finger protein 827##NM_001080531|C4orf51|646603|chromosome 4 open reading frame 51##NM_007080|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC016026|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC019894|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AJ238098|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182292|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK312126|LSM6|11157|LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AM392861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC146684|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122860|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ122861|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##DQ871036|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831657|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831663|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831740|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##EU831744|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR936751|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120970|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC120971|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127626|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC127627|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC148252|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK291046|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC063471|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AL136728|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC023288|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AY346324|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##BC150308|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##CR933647|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_001029998|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##NM_032128|SLC10A7|84068|solute carrier family 10 (sodium/bile acid cotransporter family), member 7##AK314982|POU4F2|5458|POU class 4 homeobox 2##NM_004575|POU4F2|5458|POU class 4 homeobox 2##U06233|POU4F2|5458|POU class 4 homeobox 2##BC136344|POU4F2|5458|POU class 4 homeobox 2##BC136345|POU4F2|5458|POU class 4 homeobox 2	0.022537	
chr4	153457370	153457437	reg1035575.p2	3.577	+	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	-1109	-	NM_001013415 AY008274	-153739	-	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	-183507	-	TSC_hg19_v1_chr4_+_153457435 AL137273 BC034819	30	+	CU687412 BC060775 TSC_hg19_v1_chr4_-_153601114 AK296694 AK309319 AK056590 NM_152680	143797	-	BC037869 NM_145720	243500	-	BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##AL137273|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC034819|DKFZP434I0714|54553|uncharacterized protein DKFZP434I0714##BC060775|TMEM154|201799|transmembrane protein 154##AK296694|TMEM154|201799|transmembrane protein 154##AK309319|TMEM154|201799|transmembrane protein 154##AK056590|TMEM154|201799|transmembrane protein 154##NM_152680|TMEM154|201799|transmembrane protein 154##BC037869|TIGD4|201798|tigger transposable element derived 4##NM_145720|TIGD4|201798|tigger transposable element derived 4	0.0	
chr5	142597716	142597787	reg1031213.p2	3.577	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-447443	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-447779	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-520180	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	185072	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	185355	-	BC015610 TSC_hg19_v1_chr5_-_142783214	185460	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr7	20237603	20237705	reg1033487.p1	3.577	+	BX648384 NM_152774	-425251	-	TSC_hg19_v1_chr7_-_19748650 HQ258381 BC070358 BC013179 BC130300 BC014574 BC130298 NM_001002926 BC056267 AK301329	-489008	-	AB528954 BC069147 BC101135 BC101136 BC101137 BC101138 AF517122 NM_152898	-1052641	-	BC137090 BC144470 TSC_hg19_v1_chr7_-_20257008 AK131400 NM_182762	19326	-	AK295044 TSC_hg19_v1_chr7_+_20370337	132683	+	BC002630 NM_002214 M73780	133080	+	BX648384|TMEM196|256130|transmembrane protein 196##NM_152774|TMEM196|256130|transmembrane protein 196##HQ258381|TWISTNB|221830|TWIST neighbor##BC070358|TWISTNB|221830|TWIST neighbor##BC013179|TWISTNB|221830|TWIST neighbor##BC130300|TWISTNB|221830|TWIST neighbor##BC014574|TWISTNB|221830|TWIST neighbor##BC130298|TWISTNB|221830|TWIST neighbor##NM_001002926|TWISTNB|221830|TWIST neighbor##BC056267|TWISTNB|221830|TWIST neighbor##AK301329|TWISTNB|221830|TWIST neighbor##BC069147|FERD3L|222894|Fer3-like (Drosophila)##BC101135|FERD3L|222894|Fer3-like (Drosophila)##BC101136|FERD3L|222894|Fer3-like (Drosophila)##BC101137|FERD3L|222894|Fer3-like (Drosophila)##BC101138|FERD3L|222894|Fer3-like (Drosophila)##AF517122|FERD3L|222894|Fer3-like (Drosophila)##NM_152898|FERD3L|222894|Fer3-like (Drosophila)##BC137090|MACC1|346389|metastasis associated in colon cancer 1##BC144470|MACC1|346389|metastasis associated in colon cancer 1##AK131400|MACC1|346389|metastasis associated in colon cancer 1##NM_182762|MACC1|346389|metastasis associated in colon cancer 1##AK295044|ITGB8|3696|integrin, beta 8##BC002630|ITGB8|3696|integrin, beta 8##NM_002214|ITGB8|3696|integrin, beta 8##M73780|ITGB8|3696|integrin, beta 8	0.997915	CTCF.p2:-19:0.998
chr9	90175497	90175572	reg1028322.p2	3.577	+	TSC_hg19_v1_chr9_+_90112781 NM_004938 X76104 BC003614 AK295119	-62666	+	TSC_hg19_v1_chr9_+_90112648 AK296839 AB208871	-62948	+	AK127445 NM_001001709 BC132741 BC136791 HQ258059	-411933	+	NM_001912 NM_145918 TSC_hg19_v1_chr9_+_90341001	165459	+	AK075100 TSC_hg19_v1_chr9_+_90341022 BX648848	165488	+	AL832167 BX647102 BX647434 TSC_hg19_v1_chr9_+_90341033 BX537395 BX647101 BX647413 BX647435 BX648849 BX649140 X12451 AF304301 BC142983 AF217997	165506	+	NM_004938|DAPK1|1612|death-associated protein kinase 1##X76104|DAPK1|1612|death-associated protein kinase 1##AK295119|DAPK1|1612|death-associated protein kinase 1##AK296839|DAPK1|1612|death-associated protein kinase 1##AB208871|DAPK1|1612|death-associated protein kinase 1##AK127445|C9orf170|401535|chromosome 9 open reading frame 170##NM_001001709|C9orf170|401535|chromosome 9 open reading frame 170##BC132741|C9orf170|401535|chromosome 9 open reading frame 170##BC136791|C9orf170|401535|chromosome 9 open reading frame 170##HQ258059|C9orf170|401535|chromosome 9 open reading frame 170##NM_001912|CTSL1|1514|cathepsin L1##NM_145918|CTSL1|1514|cathepsin L1##AK075100|CTSL1|1514|cathepsin L1##BX648848|CTSL1|1514|cathepsin L1##AL832167|CTSL1|1514|cathepsin L1##BX647102|CTSL1|1514|cathepsin L1##BX647434|CTSL1|1514|cathepsin L1##BX537395|CTSL1|1514|cathepsin L1##BX647101|CTSL1|1514|cathepsin L1##BX647413|CTSL1|1514|cathepsin L1##BX647435|CTSL1|1514|cathepsin L1##BX648849|CTSL1|1514|cathepsin L1##BX649140|CTSL1|1514|cathepsin L1##X12451|CTSL1|1514|cathepsin L1##AF304301|CTSL1|1514|cathepsin L1##BC142983|CTSL1|1514|cathepsin L1##AF217997|CTSL1|1514|cathepsin L1	0.0	
chr10	104108555	104108621	reg1039610.p2	3.576	+	TSC_hg19_v1_chr10_+_104005308 AF068755 D87435 BC117681 BC117682	-103221	+	NM_001199378 NM_001199379 NM_004193 BC057804 BC068543 TSC_hg19_v1_chr10_+_104005288 BC094763 AK025330 BC032543	-103309	+	BC011642 NM_005029	-107359	-	NM_001077493 TSC_hg19_v1_chr10_+_104154290 BC002844 NM_001077494 S76638	45702	+	NM_002502 X61498 X61499 TSC_hg19_v1_chr10_+_104155501 AK292654	46883	+	TSC_hg19_v1_chr10_-_104178575 BC037332	69984	-	AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199378|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_001199379|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##NM_004193|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC094763|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##AK025330|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC032543|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC011642|PITX3|5309|paired-like homeodomain 3##NM_005029|PITX3|5309|paired-like homeodomain 3##NM_001077493|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC002844|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_001077494|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##S76638|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_002502|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61498|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61499|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##AK292654|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC037332|PSD|5662|pleckstrin and Sec7 domain containing	0.0	
chr12	122326320	122326476	reg1034161.p1	3.576	+	CU692906 DQ892664 DQ896049 BC024287 BC014790 X72389 TSC_hg19_v1_chr12_-_122296766 AK290826 NM_002150	-29705	-	TSC_hg19_v1_chr12_+_122242580 NM_015048 JF813787	-83787	+	TSC_hg19_v1_chr12_-_122240852 AK311480	-85541	-	AK057510 NM_001171993	118	-	TSC_hg19_v1_chr12_+_122326731 AB003177 NM_002813 AK315389 BC002383 BC004184 BC004213 DQ893594 EU831432 EU831524 AB528684	297	+	TSC_hg19_v1_chr12_+_122356497 NM_001178003 NM_144668 BC028421 BC036233	30083	+	DQ892664|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##DQ896049|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC024287|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##BC014790|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##X72389|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##AK290826|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_002150|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_015048|SETD1B|23067|SET domain containing 1B##JF813787|SETD1B|23067|SET domain containing 1B##AK057510|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_001171993|HPD|3242|4-hydroxyphenylpyruvate dioxygenase##NM_002813|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##AK315389|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC002383|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004184|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##BC004213|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##DQ893594|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831432|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##EU831524|PSMD9|5715|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9##NM_001178003|WDR66|144406|WD repeat domain 66##NM_144668|WDR66|144406|WD repeat domain 66##BC028421|WDR66|144406|WD repeat domain 66##BC036233|WDR66|144406|WD repeat domain 66	0.0	
chr14	23294045	23294124	reg1033246.p1	3.576	+	Y18474 BX248291 AF092032 AJ130718 NM_001126106	-5119	-	AB020532 BX161519 NM_001126105	-9026	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	-9452	-	TSC_hg19_v1_chr14_+_23299095 AK096946 NM_178336 NM_180982 NM_181304 NM_181305 NM_181306 NM_181307	5007	+	TSC_hg19_v1_chr14_+_23299104 AK292011 AK000450 BX248749 BC055381 BC068070	5026	+	NM_004995 AK312657 TSC_hg19_v1_chr14_+_23305800 AK291325 BC064803	11716	+	Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AB020532|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX161519|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126105|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK096946|MRPL52|122704|mitochondrial ribosomal protein L52##NM_178336|MRPL52|122704|mitochondrial ribosomal protein L52##NM_180982|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181304|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181305|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181306|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181307|MRPL52|122704|mitochondrial ribosomal protein L52##AK292011|MRPL52|122704|mitochondrial ribosomal protein L52##AK000450|MRPL52|122704|mitochondrial ribosomal protein L52##BX248749|MRPL52|122704|mitochondrial ribosomal protein L52##BC055381|MRPL52|122704|mitochondrial ribosomal protein L52##BC068070|MRPL52|122704|mitochondrial ribosomal protein L52##NM_004995|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##AK312657|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##AK291325|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##BC064803|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	0.0	
chr17	38515043	38515224	reg1004642.p2	3.576	+	NM_001024809	-16863	+	TSC_hg19_v1_chr17_+_38474548 AK130192	-40586	+	TSC_hg19_v1_chr17_+_38474521 AK292205 FJ487576	-40609	+	TSC_hg19_v1_chr17_-_38520951 AK125254 NM_152219	5813	-	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	58991	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	84686	+	NM_001024809|RARA|5914|retinoic acid receptor, alpha##AK130192|RARA|5914|retinoic acid receptor, alpha##AK292205|RARA|5914|retinoic acid receptor, alpha##FJ487576|RARA|5914|retinoic acid receptor, alpha##AK125254|GJD3|125111|gap junction protein, delta 3, 31.9kDa##NM_152219|GJD3|125111|gap junction protein, delta 3, 31.9kDa##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4	0.0	
chr17	76126750	76126831	reg1031382.p1	3.576	+	TSC_hg19_v1_chr17_-_76124837 AK096076 AY099356 AY099357 AK303584 AK310734 NM_001127198 AK021738	-1952	-	TSC_hg19_v1_chr17_-_76124768 AK074065	-2018	-	BC039479 NM_001142640 NM_018996	-126508	+	TSC_hg19_v1_chr17_+_76126871 AK310623 NM_152468 AK303499 BC110296 AY099358 AY099359 BC028076 AK090478	76	+	BC023597 NM_007267 TSC_hg19_v1_chr17_-_76128499	1710	-	AY358510 NM_001163075	15643	+	AK096076|TMC6|11322|transmembrane channel-like 6##AY099356|TMC6|11322|transmembrane channel-like 6##AY099357|TMC6|11322|transmembrane channel-like 6##AK303584|TMC6|11322|transmembrane channel-like 6##AK310734|TMC6|11322|transmembrane channel-like 6##NM_001127198|TMC6|11322|transmembrane channel-like 6##AK021738|TMC6|11322|transmembrane channel-like 6##AK074065|TMC6|11322|transmembrane channel-like 6##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK310623|TMC8|147138|transmembrane channel-like 8##NM_152468|TMC8|147138|transmembrane channel-like 8##AK303499|TMC8|147138|transmembrane channel-like 8##BC110296|TMC8|147138|transmembrane channel-like 8##AY099358|TMC8|147138|transmembrane channel-like 8##AY099359|TMC8|147138|transmembrane channel-like 8##BC028076|TMC8|147138|transmembrane channel-like 8##AK090478|TMC8|147138|transmembrane channel-like 8##BC023597|TMC6|11322|transmembrane channel-like 6##NM_007267|TMC6|11322|transmembrane channel-like 6##AY358510|C17orf99|100141515|chromosome 17 open reading frame 99##NM_001163075|C17orf99|100141515|chromosome 17 open reading frame 99	0.0	
chr3	13081853	13081975	reg1033239.p1	3.576	+	TSC_hg19_v1_chr3_-_13057189 BC071805	-24696	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	-72806	-	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	-140306	-	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	32684	-	AB020713 TSC_hg19_v1_chr3_-_13384784	302851	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	379818	-	AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1##AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##AB020713|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa	0.0	
chr4	16028154	16028279	reg1002594.p2	3.576	+	AF361936 CU693032 DQ892062 DQ895256 AB529223 BC025720 AB021123 AY358978 NM_031950	-63412	-	NM_005130	-87854	-	BC003628 M60047 BC008910 BC018852 AK291307 TSC_hg19_v1_chr4_-_15939972	-88256	-	NM_001145849 NM_001145850 NM_001145851 NM_001145852 NM_006017	49524	-	TSC_hg19_v1_chr4_-_16085325 AF117225	57115	-	NM_001145847 AK075411 BC012089 NM_001145848 TSC_hg19_v1_chr4_-_16085647 AK027420 AK226033	57408	-	AF361936|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ892062|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ895256|FGFBP2|83888|fibroblast growth factor binding protein 2##BC025720|FGFBP2|83888|fibroblast growth factor binding protein 2##AB021123|FGFBP2|83888|fibroblast growth factor binding protein 2##AY358978|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_031950|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_005130|FGFBP1|9982|fibroblast growth factor binding protein 1##BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1##M60047|FGFBP1|9982|fibroblast growth factor binding protein 1##BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1##BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1##AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1##NM_001145849|PROM1|8842|prominin 1##NM_001145850|PROM1|8842|prominin 1##NM_001145851|PROM1|8842|prominin 1##NM_001145852|PROM1|8842|prominin 1##NM_006017|PROM1|8842|prominin 1##AF117225|PROM1|8842|prominin 1##NM_001145847|PROM1|8842|prominin 1##AK075411|PROM1|8842|prominin 1##BC012089|PROM1|8842|prominin 1##NM_001145848|PROM1|8842|prominin 1##AK027420|PROM1|8842|prominin 1##AK226033|PROM1|8842|prominin 1	0.0	
chr4	40209049	40209185	reg1030379.p1	3.576	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-10476	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-150585	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-229524	-	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	128328	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	307467	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	308841	-	NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47	0.0	
chr5	1524398	1524489	reg1033585.p1	3.576	+	TSC_hg19_v1_chr5_-_1524086 NM_024830	-381	-	TSC_hg19_v1_chr5_-_1523908 AB244719 AB463849	-509	-	CU676500 BC020166 AK090444 TSC_hg19_v1_chr5_-_1494996	-29509	-	TSC_hg19_v1_chr5_-_1594617 BC150558	70188	-	TSC_hg19_v1_chr5_-_1634097 BC020552 BC053586 BC044220 AK308990 AK315872 BC067863 BC014604 AK307076	109626	-	TSC_hg19_v1_chr5_-_1634100 BC019918 BC045555 AK311210 AK311251	109675	-	NM_024830|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AB244719|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##BC020166|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AK090444|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##BC150558|SDHAP3|728609|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3##BC020552|LOC728613|728613|programmed cell death 6 pseudogene##BC053586|LOC728613|728613|programmed cell death 6 pseudogene##BC044220|LOC728613|728613|programmed cell death 6 pseudogene##AK308990|LOC728613|728613|programmed cell death 6 pseudogene##BC067863|LOC728613|728613|programmed cell death 6 pseudogene##BC014604|LOC728613|728613|programmed cell death 6 pseudogene##AK307076|LOC728613|728613|programmed cell death 6 pseudogene##BC019918|LOC728613|728613|programmed cell death 6 pseudogene##BC045555|LOC728613|728613|programmed cell death 6 pseudogene##AK311210|LOC728613|728613|programmed cell death 6 pseudogene	0.0	
chr5	180751698	180751824	reg1031834.p2	3.576	+	TSC_hg19_v1_chr5_+_180688213 BC016291	-63534	+	AK054802 TSC_hg19_v1_chr5_-_180688115 BC007372 NM_032765 AB209243	-63636	-	BC014256 TSC_hg19_v1_chr5_-_180670905 BC010119 BC019093 BC032006 BC035460 BC019362 BC014788 BC000366 M24194 BC021993 AK095666 AK301468 D28398 AK310916 AK222488 NM_006098 AK303316 BC000214	-80858	-	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	42516	+	None	None	None	None	None	None	AK054802|TRIM52|84851|tripartite motif containing 52##BC007372|TRIM52|84851|tripartite motif containing 52##NM_032765|TRIM52|84851|tripartite motif containing 52##AB209243|TRIM52|84851|tripartite motif containing 52##BC014256|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC010119|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC019093|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC032006|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC035460|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC019362|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC014788|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC000366|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##M24194|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC021993|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK095666|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK301468|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##D28398|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK310916|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK222488|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##NM_006098|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##AK303316|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC000214|GNB2L1|10399|guanine nucleotide binding protein (G protein), beta polypeptide 2-like 1##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16	1.038857	CTCF.p2:10:0.988
chr5	88168988	88169058	reg1038059.p2	3.576	+	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	-49350	-	TSC_hg19_v1_chr5_-_87980643 AK125167	-188316	-	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	-199878	-	TSC_hg19_v1_chr5_-_88179002 AK312472 L08895 AK307883 BC026341	9983	-	TSC_hg19_v1_chr5_-_88179279 NM_001193350 NM_002397	10262	-	TSC_hg19_v1_chr5_+_88185094 AL050132	16097	+	EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C##AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##AK312472|MEF2C|4208|myocyte enhancer factor 2C##L08895|MEF2C|4208|myocyte enhancer factor 2C##AK307883|MEF2C|4208|myocyte enhancer factor 2C##BC026341|MEF2C|4208|myocyte enhancer factor 2C##NM_001193350|MEF2C|4208|myocyte enhancer factor 2C##NM_002397|MEF2C|4208|myocyte enhancer factor 2C	0.0	
chr8	51066329	51066419	reg1032854.p1	3.576	+	AJ003030 NM_018967	-241778	+	NM_001007176 BC017981 AJ276240	-1081465	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-1232464	-	EU170240 AY877349 NM_144651	1655579	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	1745228	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	1745353	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.969052	CTCF.p2:0:0.969
chr9	981346	981501	reg1045544.p1	3.576	+	AF193873 TSC_hg19_v1_chr9_+_977425	-4018	+	NM_021240 BC113584 BC117245	-4458	+	AF130728 AY442914 AY442915 NM_021951 AK313594 AJ276801 AL162131 BC040847 EU446468 AB463577 CU691924	-139660	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	68921	+	TSC_hg19_v1_chr9_+_1050370 Y19052	68947	+	AF130729 NM_181872	69186	+	AF193873|DMRT3|58524|doublesex and mab-3 related transcription factor 3##NM_021240|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC113584|DMRT3|58524|doublesex and mab-3 related transcription factor 3##BC117245|DMRT3|58524|doublesex and mab-3 related transcription factor 3##AF130728|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442914|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AY442915|DMRT1|1761|doublesex and mab-3 related transcription factor 1##NM_021951|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AK313594|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AJ276801|DMRT1|1761|doublesex and mab-3 related transcription factor 1##AL162131|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BC040847|DMRT1|1761|doublesex and mab-3 related transcription factor 1##EU446468|DMRT1|1761|doublesex and mab-3 related transcription factor 1##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2	0.0	
chrX	94602014	94602092	reg1037775.p1	3.576	+	NM_001171109 NM_001171110 NM_001171111 NM_173698	-1673042	+	AK090772 D50370 TSC_hg19_v1_chrX_-_92928576 BC034954 AK315176 AK223621 BC094729 AK095682 NM_004538	-1673430	-	AJ564931 NM_001168360 NM_001168361 NM_001168362 NM_001168363 AF206516 AF217288 AY861432 AY861433 AY861434 AY861435	-3511572	+	NM_006729 NM_007309 Y15908 Y15909 TSC_hg19_v1_chrX_+_95939840 AK291272	1337698	+	TSC_hg19_v1_chrX_+_95939855 BC117414 BC143838 AB384711	1337901	+	NM_013347 U24186 BC069791 BC069808 BC069824 BC104013 BC104014	1536917	+	NM_001171109|FAM133A|286499|family with sequence similarity 133, member A##NM_001171110|FAM133A|286499|family with sequence similarity 133, member A##NM_001171111|FAM133A|286499|family with sequence similarity 133, member A##NM_173698|FAM133A|286499|family with sequence similarity 133, member A##AK090772|NAP1L3|4675|nucleosome assembly protein 1-like 3##D50370|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC034954|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK315176|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK223621|NAP1L3|4675|nucleosome assembly protein 1-like 3##BC094729|NAP1L3|4675|nucleosome assembly protein 1-like 3##AK095682|NAP1L3|4675|nucleosome assembly protein 1-like 3##NM_004538|NAP1L3|4675|nucleosome assembly protein 1-like 3##AJ564931|PCDH11X|27328|protocadherin 11 X-linked##NM_001168360|PCDH11X|27328|protocadherin 11 X-linked##NM_001168361|PCDH11X|27328|protocadherin 11 X-linked##NM_001168362|PCDH11X|27328|protocadherin 11 X-linked##NM_001168363|PCDH11X|27328|protocadherin 11 X-linked##AF206516|PCDH11X|27328|protocadherin 11 X-linked##AF217288|PCDH11X|27328|protocadherin 11 X-linked##AY861432|PCDH11X|27328|protocadherin 11 X-linked##AY861433|PCDH11X|27328|protocadherin 11 X-linked##AY861434|PCDH11X|27328|protocadherin 11 X-linked##AY861435|PCDH11X|27328|protocadherin 11 X-linked##NM_006729|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_007309|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15908|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##Y15909|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##AK291272|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC117414|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##BC143838|DIAPH2|1730|diaphanous homolog 2 (Drosophila)##NM_013347|RPA4|29935|replication protein A4, 30kDa##U24186|RPA4|29935|replication protein A4, 30kDa##BC069791|RPA4|29935|replication protein A4, 30kDa##BC069808|RPA4|29935|replication protein A4, 30kDa##BC069824|RPA4|29935|replication protein A4, 30kDa##BC104013|RPA4|29935|replication protein A4, 30kDa##BC104014|RPA4|29935|replication protein A4, 30kDa	0.946312	CTCF.p2:-6:0.946
chr10	22292735	22292877	reg1037471.p2	3.575	+	TSC_hg19_v1_chr10_-_22292660 BC110894 NM_022365 AK308369	-141	-	AY225122 AK027263 TSC_hg19_v1_chr10_-_22292522 BC014436	-357	-	AY598745 CU687346 NM_001195626 AF060929 AF060934 AF060935 AF060936 AF060937 AF060938	-469181	+	NM_001199938	206105	-	TSC_hg19_v1_chr10_+_22540999 AK094582	248207	+	TSC_hg19_v1_chr10_+_22605316 NM_001204062 NM_012071 BX647275 AF201948 BC022898 AF078848 AK128789 AK313235 AK295109 AY542159	312519	+	BC110894|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##NM_022365|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK308369|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AY225122|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AK027263|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##BC014436|DNAJC1|64215|DnaJ (Hsp40) homolog, subfamily C, member 1##AY598745|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##NM_001195626|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060929|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060934|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060935|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060936|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060937|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##AF060938|MLLT10|8028|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10##NM_001199938|EBLN1|340900|endogenous Bornavirus-like nucleoprotein 1##AK094582|LOC100130992|100130992|uncharacterized LOC100130992##NM_001204062|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough##NM_012071|COMMD3|23412|COMM domain containing 3##BX647275|COMMD3|23412|COMM domain containing 3##AF201948|COMMD3|23412|COMM domain containing 3##BC022898|COMMD3|23412|COMM domain containing 3##AF078848|COMMD3|23412|COMM domain containing 3##AK128789|COMMD3|23412|COMM domain containing 3##AK313235|COMMD3-BMI1|100532731|COMMD3-BMI1 readthrough##AY542159|COMMD3|23412|COMM domain containing 3	0.0	
chr18	20811376	20811455	reg1033940.p1	3.575	+	BC037218 NM_138375	-75627	+	EF028204 NM_001100619	-95689	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-297600	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	206456	-	AK057292 NM_003831	221371	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	221831	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.0	
chr19	17232904	17232970	reg1036675.p2	3.575	+	TSC_hg19_v1_chr19_+_17186586 NM_001130065 NM_004145 AB209997 AB290184	-46344	+	BC004398 AY211919 TSC_hg19_v1_chr19_-_17186246 NM_001011699 NM_033417 AK295994	-46616	-	AB033109 AY101765 TSC_hg19_v1_chr19_-_17137621 BC067854 NM_015692	-95397	-	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	93235	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	93268	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	104097	+	NM_001130065|MYO9B|4650|myosin IXB##NM_004145|MYO9B|4650|myosin IXB##AB209997|MYO9B|4650|myosin IXB##AB290184|MYO9B|4650|myosin IXB##BC004398|HAUS8|93323|HAUS augmin-like complex, subunit 8##AY211919|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_001011699|HAUS8|93323|HAUS augmin-like complex, subunit 8##NM_033417|HAUS8|93323|HAUS augmin-like complex, subunit 8##AK295994|HAUS8|93323|HAUS augmin-like complex, subunit 8##AB033109|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##AY101765|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##BC067854|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_015692|CPAMD8|27151|C3 and PZP-like, alpha-2-macroglobulin domain containing 8##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1	0.0	
chr2	234108905	234109085	reg1025241.p2	3.575	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-183879	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-183936	+	BC069151 BC107053 NM_005383	-211614	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	51271	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	51328	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	51362	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.0	
chr3	119281698	119281852	reg1027903.p2	3.575	+	M27533 BC042665 AK292129 NM_005191	-3334	-	NM_016589 TSC_hg19_v1_chr3_+_119217393 AF139077 AL136622 AK026250 AK225954 AF210057 AL390077 AY358633 AL390090 BC012341 AB528090 AM393632 CU680290 CR457158 CR533524	-64302	+	TSC_hg19_v1_chr3_+_119187809 NM_152305 AY298903 BC030614 AK295984 AK301002 AK315367 AK222937 AF168711 BC048810 AY358581 AK075444 BC011871 CU688946 CU690580	-93950	+	TSC_hg19_v1_chr3_+_119298355 AK304560 AK291787	16620	+	BC063883 NM_001125 TSC_hg19_v1_chr3_+_119298606	16790	+	NM_001206960 NM_001206961 NM_015900 AK301880 AK222705 AK313519 BC035347 BC047703 U37591 AF035268 AF035269 AB527604 CU690470	34952	+	M27533|CD80|941|CD80 molecule##BC042665|CD80|941|CD80 molecule##AK292129|CD80|941|CD80 molecule##NM_005191|CD80|941|CD80 molecule##NM_016589|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF139077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL136622|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK026250|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AK225954|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AF210057|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390077|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AY358633|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AL390090|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##BC012341|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##AM393632|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR457158|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##CR533524|TIMMDC1|51300|translocase of inner mitochondrial membrane domain containing 1##NM_152305|POGLUT1|56983|protein O-glucosyltransferase 1##AY298903|POGLUT1|56983|protein O-glucosyltransferase 1##BC030614|POGLUT1|56983|protein O-glucosyltransferase 1##AK295984|POGLUT1|56983|protein O-glucosyltransferase 1##AK301002|POGLUT1|56983|protein O-glucosyltransferase 1##AK315367|POGLUT1|56983|protein O-glucosyltransferase 1##AK222937|POGLUT1|56983|protein O-glucosyltransferase 1##AF168711|POGLUT1|56983|protein O-glucosyltransferase 1##BC048810|POGLUT1|56983|protein O-glucosyltransferase 1##AY358581|POGLUT1|56983|protein O-glucosyltransferase 1##AK075444|POGLUT1|56983|protein O-glucosyltransferase 1##AK304560|ADPRH|141|ADP-ribosylarginine hydrolase##AK291787|ADPRH|141|ADP-ribosylarginine hydrolase##BC063883|ADPRH|141|ADP-ribosylarginine hydrolase##NM_001125|ADPRH|141|ADP-ribosylarginine hydrolase##NM_001206960|PLA1A|51365|phospholipase A1 member A##NM_001206961|PLA1A|51365|phospholipase A1 member A##NM_015900|PLA1A|51365|phospholipase A1 member A##AK301880|PLA1A|51365|phospholipase A1 member A##AK222705|PLA1A|51365|phospholipase A1 member A##AK313519|PLA1A|51365|phospholipase A1 member A##BC035347|PLA1A|51365|phospholipase A1 member A##BC047703|PLA1A|51365|phospholipase A1 member A##U37591|PLA1A|51365|phospholipase A1 member A##AF035268|PLA1A|51365|phospholipase A1 member A##AF035269|PLA1A|51365|phospholipase A1 member A	0.0	
chr3	57021383	57021462	reg1023842.p1	3.575	+	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	-185511	-	AK293864 AB209661 NM_001128616	-211753	-	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-304215	-	AY221117 NM_181727 BC126274 BC136498	73081	+	AF433662 AK302493 NM_001128615	91891	-	AF458067 TSC_hg19_v1_chr3_-_57199347	177911	-	AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12##AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF458067|IL17RD|54756|interleukin 17 receptor D	0.0	
chr4	71870092	71870172	reg1036330.p1	3.575	+	M60527 TSC_hg19_v1_chr4_+_71859434 BC114617 JF806429 BT019941 BT019942 CR536527 CR541876	-10661	+	TSC_hg19_v1_chr4_+_71859320 NM_000788 AK303292 AK313523 BC103764	-10825	+	NM_001244766 NM_001244767 NM_173468 AK093545 AX748194 TSC_hg19_v1_chr4_+_71768085 AK299481 BC038112 AK313513	-102019	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	182591	+	AF069510 AB470072 AF053753 AF053754 AF310248 EF531618 TSC_hg19_v1_chr4_+_72102322	232154	+	BC030977 NM_003759 AF007216 AK308038 CU689062	334735	+	M60527|DCK|1633|deoxycytidine kinase##BC114617|DCK|1633|deoxycytidine kinase##JF806429|DCK|1633|deoxycytidine kinase##BT019941|DCK|1633|deoxycytidine kinase##BT019942|DCK|1633|deoxycytidine kinase##CR536527|DCK|1633|deoxycytidine kinase##CR541876|DCK|1633|deoxycytidine kinase##NM_000788|DCK|1633|deoxycytidine kinase##AK303292|DCK|1633|deoxycytidine kinase##AK313523|DCK|1633|deoxycytidine kinase##BC103764|DCK|1633|deoxycytidine kinase##NM_001244766|MOB1B|92597|MOB kinase activator 1B##NM_001244767|MOB1B|92597|MOB kinase activator 1B##NM_173468|MOB1B|92597|MOB kinase activator 1B##AK093545|MOB1B|92597|MOB kinase activator 1B##AK299481|MOB1B|92597|MOB kinase activator 1B##BC038112|MOB1B|92597|MOB kinase activator 1B##AK313513|MOB1B|92597|MOB kinase activator 1B##AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF069510|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AB470072|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053753|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF053754|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF310248|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##EF531618|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##BC030977|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_003759|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF007216|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK308038|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	0.940104	CTCF.p2:-14:0.940
chr6	9482542	9482612	reg1036236.p1	3.575	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-1046689	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-1046869	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-1379787	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	930039	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	932698	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	932891	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.0	
chr7	36406836	36406976	reg1040082.p2	3.575	+	TSC_hg19_v1_chr7_-_36406811 BC056191 AB384038 BC136362 BC144032 AB020702 BC110422 NM_001199707 AK293912 AK294686 AK302559 NM_001199706 NM_015314 NM_001199708	-234	-	TSC_hg19_v1_chr7_+_36193025 AB051493	-213851	+	TSC_hg19_v1_chr7_+_36192862 AK027386 BC065518	-214023	+	TSC_hg19_v1_chr7_+_36429470 BC070066 NM_018685 AK299803 AK291254 AF273437	22534	+	BC028678 NM_001100425	22808	-	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	357170	-	BC056191|KIAA0895|23366|KIAA0895##BC136362|KIAA0895|23366|KIAA0895##BC144032|KIAA0895|23366|KIAA0895##AB020702|KIAA0895|23366|KIAA0895##BC110422|KIAA0895|23366|KIAA0895##NM_001199707|KIAA0895|23366|KIAA0895##AK293912|KIAA0895|23366|KIAA0895##AK294686|KIAA0895|23366|KIAA0895##AK302559|KIAA0895|23366|KIAA0895##NM_001199706|KIAA0895|23366|KIAA0895##NM_015314|KIAA0895|23366|KIAA0895##NM_001199708|KIAA0895|23366|KIAA0895##AB051493|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##AK027386|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC065518|EEPD1|80820|endonuclease/exonuclease/phosphatase family domain containing 1##BC070066|ANLN|54443|anillin, actin binding protein##NM_018685|ANLN|54443|anillin, actin binding protein##AK299803|ANLN|54443|anillin, actin binding protein##AK291254|ANLN|54443|anillin, actin binding protein##AF273437|ANLN|54443|anillin, actin binding protein##BC028678|KIAA0895|23366|KIAA0895##NM_001100425|KIAA0895|23366|KIAA0895##M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)	0.0	
chr1	209925411	209925552	reg1042668.p2	3.574	+	NM_005525 TSC_hg19_v1_chr1_+_209878192 BC012593 AK313973 AB590223 DQ892912 EU176721	-47270	+	NM_001206741 NM_181755	-65957	+	TSC_hg19_v1_chr1_+_209848994 BT007101 CR542179 CR542193 DQ894610 EU176279	-76470	+	TSC_hg19_v1_chr1_+_209929480 AK122792 NM_025228 BX648450 BC110302 AK300555 AK312755 AK225762 AL049667	3969	+	TSC_hg19_v1_chr1_+_209941909 AK126139	16435	+	TSC_hg19_v1_chr1_-_209957872 BC039719 NM_152485 AK057807	32406	-	NM_005525|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##BC012593|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##AK313973|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##DQ892912|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##EU176721|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##NM_001206741|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##NM_181755|HSD11B1|3290|hydroxysteroid (11-beta) dehydrogenase 1##BT007101|G0S2|50486|G0/G1switch 2##CR542179|G0S2|50486|G0/G1switch 2##CR542193|G0S2|50486|G0/G1switch 2##DQ894610|G0S2|50486|G0/G1switch 2##EU176279|G0S2|50486|G0/G1switch 2##AK122792|TRAF3IP3|80342|TRAF3 interacting protein 3##NM_025228|TRAF3IP3|80342|TRAF3 interacting protein 3##BX648450|TRAF3IP3|80342|TRAF3 interacting protein 3##BC110302|TRAF3IP3|80342|TRAF3 interacting protein 3##AK300555|TRAF3IP3|80342|TRAF3 interacting protein 3##AK312755|TRAF3IP3|80342|TRAF3 interacting protein 3##AK225762|TRAF3IP3|80342|TRAF3 interacting protein 3##AL049667|TRAF3IP3|80342|TRAF3 interacting protein 3##AK126139|TRAF3IP3|80342|TRAF3 interacting protein 3##BC039719|C1orf74|148304|chromosome 1 open reading frame 74##NM_152485|C1orf74|148304|chromosome 1 open reading frame 74##AK057807|C1orf74|148304|chromosome 1 open reading frame 74	0.0	
chr12	6435599	6435712	reg1035463.p1	3.574	+	AK095373 NM_001144857	-13839	+	AK023741 NM_001144856	-15557	+	TSC_hg19_v1_chr12_+_6419886 BC040273	-15770	+	TSC_hg19_v1_chr12_-_6442970 AY182755	7339	-	AB590201 EU176385 EU176726 CU679633 EU927389 M60275 TSC_hg19_v1_chr12_-_6451145	15407	-	M58286 TSC_hg19_v1_chr12_-_6451171 M33294 AK056611 AK298729 AK304517 M63121 AK308061 AK291088 BC010140 AK315509 NM_001065	15565	-	AK095373|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144857|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AK023741|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##NM_001144856|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##BC040273|PLEKHG6|55200|pleckstrin homology domain containing, family G (with RhoGef domain) member 6##AY182755|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU176385|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU176726|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##EU927389|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M60275|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M58286|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M33294|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK056611|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK298729|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK304517|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##M63121|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK308061|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK291088|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##BC010140|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##AK315509|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A##NM_001065|TNFRSF1A|7132|tumor necrosis factor receptor superfamily, member 1A	0.547884	CTCF.p2:-17:0.548
chr14	34512938	34513118	reg1029229.p1	3.574	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	-92879	-	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1104538	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1714492	+	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	418459	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	495857	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	586327	-	BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6	0.0	
chr14	77493016	77493133	reg1043771.p1	3.574	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-200279	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-213812	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-213864	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	1610	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	1986	-	AK124327 TSC_hg19_v1_chr14_-_77542533	49459	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.0	
chr15	41061326	41061423	reg1023657.p1	3.574	+	TSC_hg19_v1_chr15_+_41056274 AK223430 AK311872 NM_005258 BC112262 BC112264 BC143904 HQ258032	-5066	+	TSC_hg19_v1_chr15_-_41047453 AK001441 NM_018145 AK123192	-13910	-	BC063844 TSC_hg19_v1_chr15_-_41047430 AK097286 AK092058	-13941	-	NM_001130448 BC027487 AK291344	843	+	TSC_hg19_v1_chr15_+_41099254 NM_001077268 AK122779 BC015738 AF445414	37968	+	AB528922 AK001496 AK308659 TSC_hg19_v1_chr15_-_41099659 BC000048	38279	-	AK223430|GCHFR|2644|GTP cyclohydrolase I feedback regulator##AK311872|GCHFR|2644|GTP cyclohydrolase I feedback regulator##NM_005258|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112262|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC112264|GCHFR|2644|GTP cyclohydrolase I feedback regulator##BC143904|GCHFR|2644|GTP cyclohydrolase I feedback regulator##HQ258032|GCHFR|2644|GTP cyclohydrolase I feedback regulator##AK001441|FAM82A2|55177|family with sequence similarity 82, member A2##NM_018145|FAM82A2|55177|family with sequence similarity 82, member A2##AK123192|FAM82A2|55177|family with sequence similarity 82, member A2##BC063844|FAM82A2|55177|family with sequence similarity 82, member A2##AK097286|FAM82A2|55177|family with sequence similarity 82, member A2##AK092058|FAM82A2|55177|family with sequence similarity 82, member A2##NM_001130448|C15orf62|643338|chromosome 15 open reading frame 62##BC027487|C15orf62|643338|chromosome 15 open reading frame 62##AK291344|C15orf62|643338|chromosome 15 open reading frame 62##NM_001077268|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AK122779|ZFYVE19|84936|zinc finger, FYVE domain containing 19##BC015738|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AF445414|ZFYVE19|84936|zinc finger, FYVE domain containing 19##AK001496|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##AK308659|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17##BC000048|DNAJC17|55192|DnaJ (Hsp40) homolog, subfamily C, member 17	0.0	
chr17	77682337	77682450	reg1004348.p1	3.574	+	NM_001082575	-203831	-	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-611363	+	AF329840 NM_198593 BC021553	-651871	+	AY230663 BC041453 NM_178543 AY358622	22496	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	69588	+	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	88514	-	NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8	0.0	
chr17	78335441	78335533	reg1033948.p2	3.574	+	TSC_hg19_v1_chr17_+_78237445 CU691854	-98053	+	TSC_hg19_v1_chr17_+_78234657 AB537889 BC036891 NM_020914 NM_020954 AL832920 BC040341 AF397204 AF397205	-100802	+	TSC_hg19_v1_chr17_+_78194101 NM_001166347 NM_001166348 NM_001166349 NM_173626 AJ544073 AK027293 AK075248 AK315132 AL833468 BC035900 AF345195	-141309	+	TSC_hg19_v1_chr17_+_78356710 AK023871	21283	+	TSC_hg19_v1_chr17_-_78388896 AK125341	53390	-	TSC_hg19_v1_chr17_+_78388966 AK092539 AK096344 AX747589 NM_001164637 NM_001164638 NM_173627 BC059781	53473	+	AB537889|RNF213|57674|ring finger protein 213##BC036891|RNF213|57674|ring finger protein 213##NM_020914|RNF213|57674|ring finger protein 213##NM_020954|RNF213|57674|ring finger protein 213##AL832920|RNF213|57674|ring finger protein 213##BC040341|RNF213|57674|ring finger protein 213##AF397204|RNF213|57674|ring finger protein 213##AF397205|RNF213|57674|ring finger protein 213##NM_001166347|SLC26A11|284129|solute carrier family 26, member 11##NM_001166348|SLC26A11|284129|solute carrier family 26, member 11##NM_001166349|SLC26A11|284129|solute carrier family 26, member 11##NM_173626|SLC26A11|284129|solute carrier family 26, member 11##AJ544073|SLC26A11|284129|solute carrier family 26, member 11##AK027293|SLC26A11|284129|solute carrier family 26, member 11##AK075248|SLC26A11|284129|solute carrier family 26, member 11##AK315132|SLC26A11|284129|solute carrier family 26, member 11##AL833468|SLC26A11|284129|solute carrier family 26, member 11##BC035900|SLC26A11|284129|solute carrier family 26, member 11##AF345195|SLC26A11|284129|solute carrier family 26, member 11##AK023871|RNF213|57674|ring finger protein 213##AK125341|LOC100294362|100294362|uncharacterized LOC100294362##AK092539|ENDOV|284131|endonuclease V##AK096344|ENDOV|284131|endonuclease V##NM_001164637|ENDOV|284131|endonuclease V##NM_001164638|ENDOV|284131|endonuclease V##NM_173627|ENDOV|284131|endonuclease V##BC059781|ENDOV|284131|endonuclease V	0.878689	CTCF.p2:-17:0.879
chr18	730188	730289	reg1036364.p1	3.574	+	TSC_hg19_v1_chr18_-_712601 NM_202758 X67098 X89602 AK127818 BX648215 AK295850 AK292780 AK309035 BC001285 NM_001126123 NM_017512	-17656	-	AB464497 AK289986 BC028301 NM_001012716	-71946	-	BC002567 TSC_hg19_v1_chr18_+_657708 BC018858 AK292620 AB590362 DQ892149 AB077207 AB077208 BT006811	-72527	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	82065	-	AK313050 NM_001099733	174705	+	NM_001117 BC093837 BC101803 S83513	175103	+	NM_202758|ENOSF1|55556|enolase superfamily member 1##X67098|ENOSF1|55556|enolase superfamily member 1##X89602|ENOSF1|55556|enolase superfamily member 1##AK127818|ENOSF1|55556|enolase superfamily member 1##BX648215|ENOSF1|55556|enolase superfamily member 1##AK295850|ENOSF1|55556|enolase superfamily member 1##AK292780|ENOSF1|55556|enolase superfamily member 1##AK309035|ENOSF1|55556|enolase superfamily member 1##BC001285|ENOSF1|55556|enolase superfamily member 1##NM_001126123|ENOSF1|55556|enolase superfamily member 1##NM_017512|ENOSF1|55556|enolase superfamily member 1##AK289986|C18orf56|494514|chromosome 18 open reading frame 56##BC028301|C18orf56|494514|chromosome 18 open reading frame 56##NM_001012716|C18orf56|494514|chromosome 18 open reading frame 56##BC002567|TYMS|7298|thymidylate synthetase##BC018858|TYMS|7298|thymidylate synthetase##AK292620|TYMS|7298|thymidylate synthetase##DQ892149|TYMS|7298|thymidylate synthetase##AB077207|TYMS|7298|thymidylate synthetase##AB077208|TYMS|7298|thymidylate synthetase##BT006811|TYMS|7298|thymidylate synthetase##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)	0.083939	
chr21	35403147	35403214	reg1025056.p2	3.574	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-115088	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-212510	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-388325	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	42661	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	42749	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	333166	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.0	
chr21	40205197	40205279	reg1038628.p1	3.574	+	TSC_hg19_v1_chr21_+_40177852 NM_005239 BC042954 AK315563 BC017040	-27361	+	J04102 TSC_hg19_v1_chr21_+_40177830	-27441	+	AY204740 AY204741 AY204742 AY204743 NM_001243432 TSC_hg19_v1_chr21_-_40033677 AK297807 NM_001136154 NM_004449	-171578	-	CU678538 AB451468 AF417108 AY463963 CR541821 CR541852 DQ892311 DQ895511 TSC_hg19_v1_chr21_-_40555337	350084	-	TSC_hg19_v1_chr21_-_40555341 AK315406	350102	-	TSC_hg19_v1_chr21_-_40555343 BC010424 BC003619 BC011755 BC012809 AJ006291 AK001455 AK308614 NM_003720 NM_203433	350163	-	NM_005239|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC042954|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AK315563|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##BC017040|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##J04102|ETS2|2114|v-ets erythroblastosis virus E26 oncogene homolog 2 (avian)##AY204740|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204741|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204742|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AY204743|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001243432|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AK297807|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_001136154|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##NM_004449|ERG|2078|v-ets erythroblastosis virus E26 oncogene homolog (avian)##AB451468|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AF417108|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AY463963|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541821|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##CR541852|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ892311|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##DQ895511|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AK315406|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC010424|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC003619|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC011755|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##BC012809|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AJ006291|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AK001455|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##AK308614|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##NM_003720|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1##NM_203433|PSMG1|8624|proteasome (prosome, macropain) assembly chaperone 1	0.613781	CTCF.p2:3:0.614
chr3	193682280	193682375	reg1034878.p2	3.574	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-371162	+	TSC_hg19_v1_chr3_+_193311006 BC043443 BC075805 AB011139	-371260	+	TSC_hg19_v1_chr3_+_193310928 NM_015560 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837	-371372	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	171606	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	171628	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	389747	-	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)##BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)##AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2	0.0	
chr4	76597700	76597781	reg1037184.p2	3.574	+	U35146 BC017417 AK294866 AK312490 NM_003948	-42095	-	AK074237 AK172776 BC117342 BC144003 BC144005 NM_001206981 NM_178497 AK300227 BC061701 HQ258050	-116467	+	NM_144721 TSC_hg19_v1_chr4_+_76439670 AK310575 AK056959 AK303658 AK308914 AK309187 AL833350 BX647579 AK313765	-158049	+	TSC_hg19_v1_chr4_-_76598333 AB014560 AK291786 NM_012297	576	-	AF053535 AF145284 TSC_hg19_v1_chr4_-_76598560	820	-	TSC_hg19_v1_chr4_-_76598595 BC011731 AK291772	839	-	U35146|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##BC017417|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##AK294866|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##AK312490|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##NM_003948|CDKL2|8999|cyclin-dependent kinase-like 2 (CDC2-related kinase)##AK074237|C4orf26|152816|chromosome 4 open reading frame 26##AK172776|C4orf26|152816|chromosome 4 open reading frame 26##BC117342|C4orf26|152816|chromosome 4 open reading frame 26##BC144003|C4orf26|152816|chromosome 4 open reading frame 26##BC144005|C4orf26|152816|chromosome 4 open reading frame 26##NM_001206981|C4orf26|152816|chromosome 4 open reading frame 26##NM_178497|C4orf26|152816|chromosome 4 open reading frame 26##AK300227|C4orf26|152816|chromosome 4 open reading frame 26##BC061701|C4orf26|152816|chromosome 4 open reading frame 26##HQ258050|C4orf26|152816|chromosome 4 open reading frame 26##NM_144721|THAP6|152815|THAP domain containing 6##AK310575|THAP6|152815|THAP domain containing 6##AK056959|THAP6|152815|THAP domain containing 6##AK303658|THAP6|152815|THAP domain containing 6##AK308914|THAP6|152815|THAP domain containing 6##AK309187|THAP6|152815|THAP domain containing 6##AL833350|THAP6|152815|THAP domain containing 6##BX647579|THAP6|152815|THAP domain containing 6##AK313765|THAP6|152815|THAP domain containing 6##AB014560|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AK291786|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##NM_012297|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2	0.0	
chr5	110093100	110093182	reg1018986.p2	3.574	+	TSC_hg19_v1_chr5_+_110074741 AK300123 BC017169 NM_138773 M74089 AK290217 AB529063	-18361	+	TSC_hg19_v1_chr5_+_110074720 AK091427	-18418	+	AK296542 BC042563 BX648527 NM_001039763	-30734	-	AY037115 NM_033035	314248	+	AF385437 NM_139281 BC133025 BC136517 AK095312 TSC_hg19_v1_chr5_+_110428045 AL832494	334818	+	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	466808	+	AK300123|SLC25A46|91137|solute carrier family 25, member 46##BC017169|SLC25A46|91137|solute carrier family 25, member 46##NM_138773|SLC25A46|91137|solute carrier family 25, member 46##M74089|SLC25A46|91137|solute carrier family 25, member 46##AK290217|SLC25A46|91137|solute carrier family 25, member 46##AK091427|SLC25A46|91137|solute carrier family 25, member 46##AK296542|TMEM232|642987|transmembrane protein 232##BC042563|TMEM232|642987|transmembrane protein 232##BX648527|TMEM232|642987|transmembrane protein 232##NM_001039763|TMEM232|642987|transmembrane protein 232##AY037115|TSLP|85480|thymic stromal lymphopoietin##NM_033035|TSLP|85480|thymic stromal lymphopoietin##AF385437|WDR36|134430|WD repeat domain 36##NM_139281|WDR36|134430|WD repeat domain 36##BC133025|WDR36|134430|WD repeat domain 36##BC136517|WDR36|134430|WD repeat domain 36##AK095312|WDR36|134430|WD repeat domain 36##AL832494|WDR36|134430|WD repeat domain 36##L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV	0.0	
chr5	1594722	1594845	reg1034950.p2	3.574	+	TSC_hg19_v1_chr5_-_1594617 BC150558	-152	-	TSC_hg19_v1_chr5_-_1524086 NM_024830	-70721	-	TSC_hg19_v1_chr5_-_1523908 AB244719 AB463849	-70849	-	TSC_hg19_v1_chr5_-_1634097 BC020552 BC053586 BC044220 AK308990 AK315872 BC067863 BC014604 AK307076	39286	-	TSC_hg19_v1_chr5_-_1634100 BC019918 BC045555 AK311210 AK311251	39335	-	TSC_hg19_v1_chr5_-_1799926 AB049654 AF151109 AF155653 BC020642	205140	-	BC150558|SDHAP3|728609|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 3##NM_024830|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AB244719|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##BC020552|LOC728613|728613|programmed cell death 6 pseudogene##BC053586|LOC728613|728613|programmed cell death 6 pseudogene##BC044220|LOC728613|728613|programmed cell death 6 pseudogene##AK308990|LOC728613|728613|programmed cell death 6 pseudogene##BC067863|LOC728613|728613|programmed cell death 6 pseudogene##BC014604|LOC728613|728613|programmed cell death 6 pseudogene##AK307076|LOC728613|728613|programmed cell death 6 pseudogene##BC019918|LOC728613|728613|programmed cell death 6 pseudogene##BC045555|LOC728613|728613|programmed cell death 6 pseudogene##AK311210|LOC728613|728613|programmed cell death 6 pseudogene##AB049654|MRPL36|64979|mitochondrial ribosomal protein L36##AF151109|MRPL36|64979|mitochondrial ribosomal protein L36##AF155653|MRPL36|64979|mitochondrial ribosomal protein L36##BC020642|MRPL36|64979|mitochondrial ribosomal protein L36	0.0	
chr5	88637919	88638015	reg1032176.p1	3.574	+	AL833268 AL833274 NM_001131005 NM_001193347	-438073	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-452703	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-452847	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	1067572	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1132215	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1132611	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr7	139333880	139334061	reg1034193.p2	3.574	+	NM_001080511	-125297	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-165538	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-288956	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	143935	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	144069	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	195122	+	NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.0	
chr7	7392665	7392774	reg1038860.p1	3.574	+	TSC_hg19_v1_chr7_+_7222291 NM_020156 AK309328	-170472	+	TSC_hg19_v1_chr7_-_6865896 BC010130 AK292326 BC132749 BC132751 BC067810 NM_198097	-526821	-	AK296026 CU679629 AK000993 TSC_hg19_v1_chr7_-_6865849	-526881	-	BC136892 BC144431 AJ890451 NM_001037763	182735	-	TSC_hg19_v1_chr7_+_7606553 NM_019005 BC068512	213869	+	TSC_hg19_v1_chr7_+_7606667 AK294561	213967	+	NM_020156|C1GALT1|56913|core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1##BC010130|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK292326|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC132749|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC132751|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##BC067810|CCZ1|51622|CCZ1 vacuolar protein trafficking and biogenesis associated homolog (S. cerevisiae)##NM_198097|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK296026|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK000993|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##BC136892|COL28A1|340267|collagen, type XXVIII, alpha 1##BC144431|COL28A1|340267|collagen, type XXVIII, alpha 1##AJ890451|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_001037763|COL28A1|340267|collagen, type XXVIII, alpha 1##NM_019005|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##BC068512|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)##AK294561|MIOS|54468|missing oocyte, meiosis regulator, homolog (Drosophila)	0.160275	
chr7	81469348	81469489	reg1041485.p2	3.574	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	-70044	-	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-920744	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-920984	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	603428	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	603662	-	Y19188 BC122565 BC125271 AB587523 TSC_hg19_v1_chr7_-_82791940	1322451	-	FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##Y19188|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC122565|PCLO|27445|piccolo (presynaptic cytomatrix protein)##BC125271|PCLO|27445|piccolo (presynaptic cytomatrix protein)	0.0	
chr9	34256247	34256368	reg1041337.p1	3.574	+	TSC_hg19_v1_chr9_+_34179058 AF222043 BC098141 BC098316 BC099726 BC100668	-77225	+	AK223235 AK309329 TSC_hg19_v1_chr9_+_34179047	-77260	+	TSC_hg19_v1_chr9_+_34179039 AK074995 BC020950 AK074745 AK295482	-77267	+	TSC_hg19_v1_chr9_-_34329214 NM_194313 AK310014	72904	-	NM_001161 NM_001244390 NM_147172 NM_147173 TSC_hg19_v1_chr9_+_34329566 AK310574 U30313	73231	+	TSC_hg19_v1_chr9_-_34376864 BC070098 NM_020702	120626	-	AF222043|UBAP1|51271|ubiquitin associated protein 1##BC098141|UBAP1|51271|ubiquitin associated protein 1##BC098316|UBAP1|51271|ubiquitin associated protein 1##BC099726|UBAP1|51271|ubiquitin associated protein 1##BC100668|UBAP1|51271|ubiquitin associated protein 1##AK223235|UBAP1|51271|ubiquitin associated protein 1##AK309329|UBAP1|51271|ubiquitin associated protein 1##AK074995|UBAP1|51271|ubiquitin associated protein 1##BC020950|UBAP1|51271|ubiquitin associated protein 1##AK074745|UBAP1|51271|ubiquitin associated protein 1##AK295482|UBAP1|51271|ubiquitin associated protein 1##NM_194313|KIF24|347240|kinesin family member 24##AK310014|KIF24|347240|kinesin family member 24##NM_001161|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_001244390|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_147172|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##NM_147173|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##U30313|NUDT2|318|nudix (nucleoside diphosphate linked moiety X)-type motif 2##BC070098|KIAA1161|57462|KIAA1161##NM_020702|KIAA1161|57462|KIAA1161	0.997013	CTCF.p2:10:0.997
chr10	5888188	5888278	reg1027517.p1	3.573	+	TSC_hg19_v1_chr10_-_5855394 Y13286 AK297177 AK297554 AK312485 NM_001115156 NM_001494	-32798	-	BX648038 AB451295 AB451429 BT006868 CR457073 D13988 DQ890573 DQ893733 BC005145 TSC_hg19_v1_chr10_-_5855330 AK309360	-32967	-	TSC_hg19_v1_chr10_+_5772610 AB095927	-115561	+	TSC_hg19_v1_chr10_-_5931834 BC067892 NM_001009941 NM_001009943 NM_019046	43623	-	TSC_hg19_v1_chr10_+_5932205 AK095343	43966	+	TSC_hg19_v1_chr10_+_5932214 NM_178150	43978	+	Y13286|GDI2|2665|GDP dissociation inhibitor 2##AK297177|GDI2|2665|GDP dissociation inhibitor 2##AK297554|GDI2|2665|GDP dissociation inhibitor 2##AK312485|GDI2|2665|GDP dissociation inhibitor 2##NM_001115156|GDI2|2665|GDP dissociation inhibitor 2##NM_001494|GDI2|2665|GDP dissociation inhibitor 2##BX648038|GDI2|2665|GDP dissociation inhibitor 2##AB451295|GDI2|2665|GDP dissociation inhibitor 2##AB451429|GDI2|2665|GDP dissociation inhibitor 2##BT006868|GDI2|2665|GDP dissociation inhibitor 2##CR457073|GDI2|2665|GDP dissociation inhibitor 2##D13988|GDI2|2665|GDP dissociation inhibitor 2##DQ890573|GDI2|2665|GDP dissociation inhibitor 2##DQ893733|GDI2|2665|GDP dissociation inhibitor 2##BC005145|GDI2|2665|GDP dissociation inhibitor 2##AK309360|GDI2|2665|GDP dissociation inhibitor 2##AB095927|FAM208B|54906|family with sequence similarity 208, member B##BC067892|ANKRD16|54522|ankyrin repeat domain 16##NM_001009941|ANKRD16|54522|ankyrin repeat domain 16##NM_001009943|ANKRD16|54522|ankyrin repeat domain 16##NM_019046|ANKRD16|54522|ankyrin repeat domain 16##AK095343|FBXO18|84893|F-box protein, helicase, 18##NM_178150|FBXO18|84893|F-box protein, helicase, 18	0.0	
chr10	65389374	65389529	reg1020916.p2	3.573	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-108210	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-108289	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-108336	+	NM_178011 BX640611 AY358315 BC111492	3296364	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	4035945	-	AF091606 AK313882 NM_013266	4066486	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.0	
chr1	105680172	105680296	reg1035804.p1	3.573	+	NM_004038 NM_001008219 NM_001008218 BC063129 BC070302 AK313275 BC092444 BC132985 BC132987 BC132997 BC144452 BC132995	-1387732	+	NM_001008221 AK292341	-1387956	+	AK292341 NM_001008221	-1441163	-	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	1919131	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	2002508	+	AB023193 TSC_hg19_v1_chr1_+_107683657	2003370	+	NM_004038|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008219|AMY1C|278|amylase, alpha 1C (salivary)##NM_001008218|AMY1B|277|amylase, alpha 1B (salivary)##BC063129|AMY1A|276|amylase, alpha 1A (salivary)##BC070302|AMY1A|276|amylase, alpha 1A (salivary)##AK313275|AMY1A|276|amylase, alpha 1A (salivary)##BC092444|AMY1A|276|amylase, alpha 1A (salivary)##BC132985|AMY1A|276|amylase, alpha 1A (salivary)##BC132987|AMY1A|276|amylase, alpha 1A (salivary)##BC132997|AMY1A|276|amylase, alpha 1A (salivary)##BC144452|AMY1A|276|amylase, alpha 1A (salivary)##BC132995|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##AK292341|AMY1A|276|amylase, alpha 1A (salivary)##NM_001008221|AMY1A|276|amylase, alpha 1A (salivary)##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##AB023193|NTNG1|22854|netrin G1	0.0	
chr1	154389660	154389770	reg1043184.p1	3.573	+	TSC_hg19_v1_chr1_+_154378074 AK293013 X58298 AK312730 BC035327 AB527867 HQ258435 HQ258616	-11641	+	AK223582 BC132684 BC132686 TSC_hg19_v1_chr1_+_154377856	-11863	+	NM_000565 NM_001206866 NM_181359 X12830 BC089410 TSC_hg19_v1_chr1_+_154377822	-11965	+	BC143765 BC117210 NM_001010846	84809	-	BC044864 NM_001098475 NM_182499	84979	+	BC107057 AY112698 TSC_hg19_v1_chr1_-_154531132 AY948200 NM_017582	141394	-	AK293013|IL6R|3570|interleukin 6 receptor##X58298|IL6R|3570|interleukin 6 receptor##AK312730|IL6R|3570|interleukin 6 receptor##BC035327|IL6R|3570|interleukin 6 receptor##HQ258435|IL6R|3570|interleukin 6 receptor##HQ258616|IL6R|3570|interleukin 6 receptor##AK223582|IL6R|3570|interleukin 6 receptor##BC132684|IL6R|3570|interleukin 6 receptor##BC132686|IL6R|3570|interleukin 6 receptor##NM_000565|IL6R|3570|interleukin 6 receptor##NM_001206866|IL6R|3570|interleukin 6 receptor##NM_181359|IL6R|3570|interleukin 6 receptor##X12830|IL6R|3570|interleukin 6 receptor##BC089410|IL6R|3570|interleukin 6 receptor##BC143765|SHE|126669|Src homology 2 domain containing E##BC117210|SHE|126669|Src homology 2 domain containing E##NM_001010846|SHE|126669|Src homology 2 domain containing E##BC044864|TDRD10|126668|tudor domain containing 10##NM_001098475|TDRD10|126668|tudor domain containing 10##NM_182499|TDRD10|126668|tudor domain containing 10##BC107057|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY112698|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##AY948200|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1##NM_017582|UBE2Q1|55585|ubiquitin-conjugating enzyme E2Q family member 1	0.0	
chr1	156475010	156475112	reg1039018.p2	3.573	+	AK310187 TSC_hg19_v1_chr1_-_156470568	-4493	-	TSC_hg19_v1_chr1_-_156470563 BC018985 BC032479 AB210005 BC064988	-4511	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	-4543	-	AY253300 TSC_hg19_v1_chr1_-_156542352 AB105103 BC131536 BC033549 NM_178229	67301	-	NM_001105669	74457	+	TSC_hg19_v1_chr1_+_156561567 AK294835 AK298222 BC056917 NM_144772 AJ315849 BC100931 BC100932 BC100933 BC100934	86494	+	AK310187|MEF2D|4209|myocyte enhancer factor 2D##BC018985|MEF2D|4209|myocyte enhancer factor 2D##BC032479|MEF2D|4209|myocyte enhancer factor 2D##AB210005|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D##AY253300|IQGAP3|128239|IQ motif containing GTPase activating protein 3##AB105103|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC131536|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC033549|IQGAP3|128239|IQ motif containing GTPase activating protein 3##NM_178229|IQGAP3|128239|IQ motif containing GTPase activating protein 3##NM_001105669|TTC24|164118|tetratricopeptide repeat domain 24##AK294835|APOA1BP|128240|apolipoprotein A-I binding protein##AK298222|APOA1BP|128240|apolipoprotein A-I binding protein##BC056917|APOA1BP|128240|apolipoprotein A-I binding protein##NM_144772|APOA1BP|128240|apolipoprotein A-I binding protein##AJ315849|APOA1BP|128240|apolipoprotein A-I binding protein##BC100931|APOA1BP|128240|apolipoprotein A-I binding protein##BC100932|APOA1BP|128240|apolipoprotein A-I binding protein##BC100933|APOA1BP|128240|apolipoprotein A-I binding protein##BC100934|APOA1BP|128240|apolipoprotein A-I binding protein	0.0	
chr14	33980744	33980852	reg1037740.p2	3.573	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-572308	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-1182262	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-1434292	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	439351	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	950689	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	1028087	-	AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein	0.0	
chr14	93570207	93570300	reg1035204.p2	3.573	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-180656	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	-180809	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-309567	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	11338	-	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	11961	-	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	80947	-	AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1	0.025423	
chr16	33673793	33673915	reg1027596.p2	3.573	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-411721	+	AL133588 NM_016212	-412340	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-468256	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	12981418	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	12981452	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	13049208	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	3.563758	CTCF.p2:-5:0.969	CTCF.p2:-44:0.971	CTCF.p2:52:0.977	CTCF.p2:-64:0.496
chr17	27224284	27224426	reg1032111.p2	3.573	+	TSC_hg19_v1_chr17_+_27182033 AB049388 AK023342 AY007435 BX537542 BC019094 NM_005702 CU676380 DQ892626 DQ895866 AF082657 AF082658	-42332	+	BC021228 TSC_hg19_v1_chr17_-_27169811 BX647766 AK299477 AK001562 AK057665 NM_001077498 NM_018182	-54565	-	TSC_hg19_v1_chr17_-_27139467 AK095569	-84908	-	M60922 CU678570 AB528533 BC003683 TSC_hg19_v1_chr17_-_27224641	253	-	TSC_hg19_v1_chr17_-_27224717 NM_004475	357	-	AX795344 TSC_hg19_v1_chr17_-_27229986 AX795345 AX795340 AX795338 AX795342 BC015582 AX795337 AX795341 AX795339 AX795335 AX795336 AK296017 AX795346 AX795343 AY358566 NM_144683	5650	-	AB049388|ERAL1|26284|Era G-protein-like 1 (E. coli)##AK023342|ERAL1|26284|Era G-protein-like 1 (E. coli)##AY007435|ERAL1|26284|Era G-protein-like 1 (E. coli)##BX537542|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC019094|ERAL1|26284|Era G-protein-like 1 (E. coli)##NM_005702|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ892626|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ895866|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082657|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082658|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC021228|C17orf63|55731|chromosome 17 open reading frame 63##BX647766|C17orf63|55731|chromosome 17 open reading frame 63##AK299477|C17orf63|55731|chromosome 17 open reading frame 63##AK001562|C17orf63|55731|chromosome 17 open reading frame 63##AK057665|C17orf63|55731|chromosome 17 open reading frame 63##NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63##NM_018182|C17orf63|55731|chromosome 17 open reading frame 63##AK095569|C17orf63|55731|chromosome 17 open reading frame 63##M60922|FLOT2|2319|flotillin 2##BC003683|FLOT2|2319|flotillin 2##NM_004475|FLOT2|2319|flotillin 2##BC015582|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AK296017|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##AY358566|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13##NM_144683|DHRS13|147015|dehydrogenase/reductase (SDR family) member 13	0.0	
chr17	71581919	71582066	reg1024102.p2	3.573	+	BC010451 TSC_hg19_v1_chr17_-_71308141 AK097835 AK027385 AK312536 BC002774 NM_012121	-273852	-	BC157870 NM_001129885	-323974	-	BC005005 TSC_hg19_v1_chr17_+_71229423	-352602	+	NM_001144952	58234	-	NM_000999 NM_001035258 AK097905 TSC_hg19_v1_chr17_+_72199816 AB055771 AK312119	617823	+	TSC_hg19_v1_chr17_+_72199849 BC000603	617861	+	BC010451|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK097835|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK027385|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##AK312536|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC002774|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##NM_012121|CDC42EP4|23580|CDC42 effector protein (Rho GTPase binding) 4##BC157870|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##NM_001129885|CPSF4L|642843|cleavage and polyadenylation specific factor 4-like##BC005005|C17orf80|55028|chromosome 17 open reading frame 80##NM_001144952|SDK2|54549|sidekick cell adhesion molecule 2##NM_000999|RPL38|6169|ribosomal protein L38##NM_001035258|RPL38|6169|ribosomal protein L38##AB055771|RPL38|6169|ribosomal protein L38##AK312119|RPL38|6169|ribosomal protein L38##BC000603|RPL38|6169|ribosomal protein L38	0.676644	
chr2	242072080	242072160	reg1033061.p1	3.573	+	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	-30394	-	NM_001080437	-133866	+	AK056601 NM_001085437	-236548	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	16751	-	AK308015 BC051689 TSC_hg19_v1_chr2_+_242089094	16938	+	CR749231 NM_001252120	17273	-	BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase##AK308015|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC051689|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##CR749231|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252120|PASK|23178|PAS domain containing serine/threonine kinase	0.0	
chr22	42177397	42177464	reg1038966.p2	3.573	+	BC025400 NM_152513 BC035720 BC144638	-81918	+	BC035403 NM_001142964 AK131457	-90872	+	AK124020 TSC_hg19_v1_chr22_-_42084824 BC005358 AF155235 NM_001003796	-92565	-	TSC_hg19_v1_chr22_+_42196682 NM_024821 AK026002 AK299311 BC017693 CR456484	19242	+	NM_004599 TSC_hg19_v1_chr22_+_42229105	51675	+	TSC_hg19_v1_chr22_+_42229114 BC051799	51682	+	BC025400|MEI1|150365|meiosis inhibitor 1##NM_152513|MEI1|150365|meiosis inhibitor 1##BC035720|MEI1|150365|meiosis inhibitor 1##BC144638|MEI1|150365|meiosis inhibitor 1##BC035403|C22orf46|79640|chromosome 22 open reading frame 46##NM_001142964|C22orf46|79640|chromosome 22 open reading frame 46##AK131457|C22orf46|79640|chromosome 22 open reading frame 46##BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_024821|CCDC134|79879|coiled-coil domain containing 134##AK026002|CCDC134|79879|coiled-coil domain containing 134##AK299311|CCDC134|79879|coiled-coil domain containing 134##BC017693|CCDC134|79879|coiled-coil domain containing 134##CR456484|CCDC134|79879|coiled-coil domain containing 134##NM_004599|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051799|SREBF2|6721|sterol regulatory element binding transcription factor 2	0.0	
chr3	10386114	10386187	reg1007085.p2	3.573	+	TSC_hg19_v1_chr3_-_10362861 NM_183352	-23297	-	AK294662 TSC_hg19_v1_chr3_-_10362797 BC091506 AK301999	-23352	-	AF052155 NM_001136232 TSC_hg19_v1_chr3_-_10362765 L09260 BC002634 AK223019 EF036494	-23403	-	TSC_hg19_v1_chr3_-_10547221 M97260	161083	-	AK308898 NM_001001331 NM_001683 TSC_hg19_v1_chr3_-_10547271	161119	-	AB210008 TSC_hg19_v1_chr3_-_10547352	161196	-	NM_183352|SEC13|6396|SEC13 homolog (S. cerevisiae)##AK294662|SEC13|6396|SEC13 homolog (S. cerevisiae)##BC091506|SEC13|6396|SEC13 homolog (S. cerevisiae)##AK301999|SEC13|6396|SEC13 homolog (S. cerevisiae)##AF052155|SEC13|6396|SEC13 homolog (S. cerevisiae)##NM_001136232|SEC13|6396|SEC13 homolog (S. cerevisiae)##L09260|SEC13|6396|SEC13 homolog (S. cerevisiae)##BC002634|SEC13|6396|SEC13 homolog (S. cerevisiae)##AK223019|SEC13|6396|SEC13 homolog (S. cerevisiae)##EF036494|SEC13|6396|SEC13 homolog (S. cerevisiae)##M97260|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2	0.0	
chr3	171358310	171358376	reg1042359.p1	3.573	+	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-180272	-	NM_000340	-613576	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-613810	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	169912	-	NM_001164436 AK026825	202805	+	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	399072	+	AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B	0.0	
chr3	39709918	39710053	reg1012414.p1	3.573	+	NM_182935 BC075796 AK127034 AK290187 BC022471	-200866	+	BC071970 J03799 NM_001012321 BC068062 BC008867 S37431 DQ891146 DQ894326 AB464170 BT007219 CU679157 CU688210 X61156	-260843	+	BC070263 NM_002295 TSC_hg19_v1_chr3_+_39448210 BC066941 BC107567 BC005391 BC062714 D28372 AF503367 BC013827 BC050688 X15005 BC034537 BC053370 BC071968 BC010418 BC071693 BC018867 BC071969 BC073863	-261775	+	TSC_hg19_v1_chr3_+_39851138 BC092512 AK126013 AF396687 NM_015460 BC109311 BC109312	141190	+	BC031275 AK057627 AK309874 AK309698 TSC_hg19_v1_chr3_-_40351022 BC045736 BC118565 BC106900	641083	-	NM_005875 TSC_hg19_v1_chr3_+_40351187 AK223448 BC006996 AF077052	641195	+	NM_182935|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC075796|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK127034|MOBP|4336|myelin-associated oligodendrocyte basic protein##AK290187|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC022471|MOBP|4336|myelin-associated oligodendrocyte basic protein##BC071970|RPSA|3921|ribosomal protein SA##J03799|RPSA|3921|ribosomal protein SA##NM_001012321|RPSA|3921|ribosomal protein SA##BC068062|RPSA|3921|ribosomal protein SA##BC008867|RPSA|3921|ribosomal protein SA##S37431|RPSA|3921|ribosomal protein SA##DQ891146|RPSA|3921|ribosomal protein SA##DQ894326|RPSA|3921|ribosomal protein SA##BT007219|RPSA|3921|ribosomal protein SA##X61156|RPSA|3921|ribosomal protein SA##BC070263|RPSA|3921|ribosomal protein SA##NM_002295|RPSA|3921|ribosomal protein SA##BC066941|RPSA|3921|ribosomal protein SA##BC107567|RPSA|3921|ribosomal protein SA##BC005391|RPSA|3921|ribosomal protein SA##BC062714|RPSA|3921|ribosomal protein SA##AF503367|RPSA|3921|ribosomal protein SA##BC013827|RPSA|3921|ribosomal protein SA##BC050688|RPSA|3921|ribosomal protein SA##X15005|RPSA|3921|ribosomal protein SA##BC034537|RPSA|3921|ribosomal protein SA##BC053370|RPSA|3921|ribosomal protein SA##BC071968|RPSA|3921|ribosomal protein SA##BC010418|RPSA|3921|ribosomal protein SA##BC071693|RPSA|3921|ribosomal protein SA##BC018867|RPSA|3921|ribosomal protein SA##BC071969|RPSA|3921|ribosomal protein SA##BC073863|RPSA|3921|ribosomal protein SA##BC092512|MYRIP|25924|myosin VIIA and Rab interacting protein##AK126013|MYRIP|25924|myosin VIIA and Rab interacting protein##AF396687|MYRIP|25924|myosin VIIA and Rab interacting protein##NM_015460|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109311|MYRIP|25924|myosin VIIA and Rab interacting protein##BC109312|MYRIP|25924|myosin VIIA and Rab interacting protein##BC031275|FLJ33065|440952|uncharacterized LOC440952##AK057627|FLJ33065|440952|uncharacterized LOC440952##AK309874|FLJ33065|440952|uncharacterized LOC440952##BC045736|FLJ33065|440952|uncharacterized LOC440952##BC118565|FLJ33065|440952|uncharacterized LOC440952##BC106900|FLJ33065|440952|uncharacterized LOC440952##NM_005875|EIF1B|10289|eukaryotic translation initiation factor 1B##AK223448|EIF1B|10289|eukaryotic translation initiation factor 1B##BC006996|EIF1B|10289|eukaryotic translation initiation factor 1B##AF077052|EIF1B|10289|eukaryotic translation initiation factor 1B	0.0	
chr3	42234491	42234563	reg1036396.p2	3.573	+	TSC_hg19_v1_chr3_+_42201684 BX647199 NM_014965 BC015922 AK000754 AM392573 AM393596 CU677507 EU446989	-32772	+	AL713787 TSC_hg19_v1_chr3_+_42190865	-43680	+	TSC_hg19_v1_chr3_+_42190749 AK294221	-43779	+	BC008283 NM_001174138	70911	-	BC111026 NM_000729	73134	-	AF326749 BC016747 NM_144634	217516	-	BX647199|TRAK1|22906|trafficking protein, kinesin binding 1##NM_014965|TRAK1|22906|trafficking protein, kinesin binding 1##BC015922|TRAK1|22906|trafficking protein, kinesin binding 1##AK000754|TRAK1|22906|trafficking protein, kinesin binding 1##AM392573|TRAK1|22906|trafficking protein, kinesin binding 1##AM393596|TRAK1|22906|trafficking protein, kinesin binding 1##EU446989|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##BC008283|CCK|885|cholecystokinin##NM_001174138|CCK|885|cholecystokinin##BC111026|CCK|885|cholecystokinin##NM_000729|CCK|885|cholecystokinin##AF326749|LYZL4|131375|lysozyme-like 4##BC016747|LYZL4|131375|lysozyme-like 4##NM_144634|LYZL4|131375|lysozyme-like 4	0.0	
chr5	149156841	149157011	reg1031413.p2	3.573	+	AK123614 NM_001172699	-5424	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	-47050	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	-47099	+	BC144044 BC035909 AB593141 M26061 NM_000440	167392	-	TSC_hg19_v1_chr5_+_149340320 NM_000112	183382	+	TSC_hg19_v1_chr5_+_149340352 AK312596	183425	+	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144044|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##BC035909|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##AB593141|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##M26061|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000440|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2	0.0	
chr5	88109369	88109467	reg1045735.p1	3.573	+	TSC_hg19_v1_chr5_-_87980643 AK125167	-128711	-	AK311230 TSC_hg19_v1_chr5_-_87969144 AK309800 AK308694 BC036480	-140273	-	BC047059 TSC_hg19_v1_chr5_+_87564842	-544569	+	AB384888 EU446634 EU832832 FM163484 FM180475 GQ129219 GQ129221 GQ129392 GQ129393 NM_001193348 NM_001193349	10255	-	TSC_hg19_v1_chr5_-_88179002 AK312472 L08895 AK307883 BC026341	69588	-	TSC_hg19_v1_chr5_-_88179279 NM_001193350 NM_002397	69867	-	AK311230|LINC00461|645323|long intergenic non-protein coding RNA 461##AK309800|LINC00461|645323|long intergenic non-protein coding RNA 461##AK308694|LINC00461|645323|long intergenic non-protein coding RNA 461##BC036480|LINC00461|645323|long intergenic non-protein coding RNA 461##BC047059|LOC100505894|100505894|uncharacterized LOC100505894##EU446634|MEF2C|4208|myocyte enhancer factor 2C##EU832832|MEF2C|4208|myocyte enhancer factor 2C##FM163484|MEF2C|4208|myocyte enhancer factor 2C##FM180475|MEF2C|4208|myocyte enhancer factor 2C##GQ129219|MEF2C|4208|myocyte enhancer factor 2C##GQ129221|MEF2C|4208|myocyte enhancer factor 2C##GQ129392|MEF2C|4208|myocyte enhancer factor 2C##GQ129393|MEF2C|4208|myocyte enhancer factor 2C##NM_001193348|MEF2C|4208|myocyte enhancer factor 2C##NM_001193349|MEF2C|4208|myocyte enhancer factor 2C##AK312472|MEF2C|4208|myocyte enhancer factor 2C##L08895|MEF2C|4208|myocyte enhancer factor 2C##AK307883|MEF2C|4208|myocyte enhancer factor 2C##BC026341|MEF2C|4208|myocyte enhancer factor 2C##NM_001193350|MEF2C|4208|myocyte enhancer factor 2C##NM_002397|MEF2C|4208|myocyte enhancer factor 2C	0.0	
chr6	156891128	156891194	reg1039301.p1	3.573	+	AF190122 NM_015718	-1114125	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1255538	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1255576	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	207902	+	TSC_hg19_v1_chr6_+_157099206 AB587572	208064	+	TSC_hg19_v1_chr6_+_157099283 AF521671	208123	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.0	
chr6	37123162	37123325	reg1037896.p1	3.573	+	TSC_hg19_v1_chr6_+_36973430 BC062363 BC023645 NM_173558 AK290419 AK301156 AK092732 AK300964 AX747694 AK024456 BC053655 BX648164 DQ893612 DQ894928	-149742	+	TSC_hg19_v1_chr6_-_36954224 AK315067	-168973	-	AK022783 TSC_hg19_v1_chr6_-_36953950 AF176006 AF192559 BC125055 BC153873 NM_014341 BC110914	-169266	-	TSC_hg19_v1_chr6_+_37137953 NM_001243186 NM_002648 M54915 BC020224 M24779 M16750 CU676514 AB528988 AK301158	14879	+	TSC_hg19_v1_chr6_-_37225372 BC026012 AK098666 BC029657 NM_145316	102143	-	TSC_hg19_v1_chr6_+_37225547 AY313781 BC047658 NM_017772 AK096340 BC109026 BC109027 BX648317 AK292893 AB449909	102356	+	BC062363|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC023645|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##NM_173558|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK290419|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK301156|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK092732|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK300964|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK024456|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BC053655|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##BX648164|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ893612|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##DQ894928|FGD2|221472|FYVE, RhoGEF and PH domain containing 2##AK315067|MTCH1|23787|mitochondrial carrier 1##AK022783|MTCH1|23787|mitochondrial carrier 1##AF176006|MTCH1|23787|mitochondrial carrier 1##AF192559|MTCH1|23787|mitochondrial carrier 1##BC125055|MTCH1|23787|mitochondrial carrier 1##BC153873|MTCH1|23787|mitochondrial carrier 1##NM_014341|MTCH1|23787|mitochondrial carrier 1##BC110914|MTCH1|23787|mitochondrial carrier 1##NM_001243186|PIM1|5292|pim-1 oncogene##NM_002648|PIM1|5292|pim-1 oncogene##M54915|PIM1|5292|pim-1 oncogene##BC020224|PIM1|5292|pim-1 oncogene##M24779|PIM1|5292|pim-1 oncogene##M16750|PIM1|5292|pim-1 oncogene##AK301158|PIM1|5292|pim-1 oncogene##BC026012|TMEM217|221468|transmembrane protein 217##AK098666|TMEM217|221468|transmembrane protein 217##BC029657|TMEM217|221468|transmembrane protein 217##NM_145316|TMEM217|221468|transmembrane protein 217##AY313781|TBC1D22B|55633|TBC1 domain family, member 22B##BC047658|TBC1D22B|55633|TBC1 domain family, member 22B##NM_017772|TBC1D22B|55633|TBC1 domain family, member 22B##AK096340|TBC1D22B|55633|TBC1 domain family, member 22B##BC109026|TBC1D22B|55633|TBC1 domain family, member 22B##BC109027|TBC1D22B|55633|TBC1 domain family, member 22B##BX648317|TBC1D22B|55633|TBC1 domain family, member 22B##AK292893|TBC1D22B|55633|TBC1 domain family, member 22B##AB449909|TBC1D22B|55633|TBC1 domain family, member 22B	0.0	
chr7	129991147	129991328	reg1027048.p4	3.573	+	NM_001127441 NM_001127442 NM_080385 AK093288 AK315256 AX748034 BC039362 AY155230 BC053681 BC042996 AK131191 AY155229	-6573	+	AK290993 NM_001163446 NM_016352 BC052289 AK310933 AK298553 AK298550 AK299023 AY358699 AF095719 AB590729 CU690898 HQ448429	-58241	+	BC007009 NM_001869 BC014571 BC015140 AK293378 U19977 DQ893811 CU675491 BT007403	-84523	+	NM_001868 AK131054 AK291493 AK293366 BC005279 X67318 CU675077 DQ890565 DQ893728 BT007313	29088	+	BC056162 AK314676 TSC_hg19_v1_chr7_-_130080886 BC018789 AK026098 AJ278890 NM_018718 AK298618 AK311382 AF429308 AF429309	89640	-	TSC_hg19_v1_chr7_+_130126173 AK098397 NM_177524 CR627364 BC090049	134879	+	NM_001127441|CPA5|93979|carboxypeptidase A5##NM_001127442|CPA5|93979|carboxypeptidase A5##NM_080385|CPA5|93979|carboxypeptidase A5##AK093288|CPA5|93979|carboxypeptidase A5##AK315256|CPA5|93979|carboxypeptidase A5##BC039362|CPA5|93979|carboxypeptidase A5##AY155230|CPA5|93979|carboxypeptidase A5##BC053681|CPA5|93979|carboxypeptidase A5##BC042996|CPA5|93979|carboxypeptidase A5##AK131191|CPA5|93979|carboxypeptidase A5##AY155229|CPA5|93979|carboxypeptidase A5##AK290993|CPA4|51200|carboxypeptidase A4##NM_001163446|CPA4|51200|carboxypeptidase A4##NM_016352|CPA4|51200|carboxypeptidase A4##BC052289|CPA4|51200|carboxypeptidase A4##AK310933|CPA4|51200|carboxypeptidase A4##AK298553|CPA4|51200|carboxypeptidase A4##AK298550|CPA4|51200|carboxypeptidase A4##AK299023|CPA4|51200|carboxypeptidase A4##AY358699|CPA4|51200|carboxypeptidase A4##AF095719|CPA4|51200|carboxypeptidase A4##HQ448429|CPA4|51200|carboxypeptidase A4##BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)##AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)##U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)##DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)##BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001868|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK131054|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK291493|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK293366|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC005279|CPA1|1357|carboxypeptidase A1 (pancreatic)##X67318|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ890565|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ893728|CPA1|1357|carboxypeptidase A1 (pancreatic)##BT007313|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC056162|CEP41|95681|centrosomal protein 41kDa##AK314676|CEP41|95681|centrosomal protein 41kDa##BC018789|CEP41|95681|centrosomal protein 41kDa##AK026098|CEP41|95681|centrosomal protein 41kDa##AJ278890|CEP41|95681|centrosomal protein 41kDa##NM_018718|CEP41|95681|centrosomal protein 41kDa##AK298618|CEP41|95681|centrosomal protein 41kDa##AK311382|CEP41|95681|centrosomal protein 41kDa##AF429308|CEP41|95681|centrosomal protein 41kDa##AF429309|CEP41|95681|centrosomal protein 41kDa##AK098397|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_177524|MEST|4232|mesoderm specific transcript homolog (mouse)##CR627364|MEST|4232|mesoderm specific transcript homolog (mouse)##BC090049|MEST|4232|mesoderm specific transcript homolog (mouse)	0.0	
chr7	139190457	139190569	reg1039940.p1	3.573	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-22081	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-145499	+	TSC_hg19_v1_chr7_+_139044701 AK022895 BC056886	-145787	+	NM_001080511	18160	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	287392	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	287526	+	BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AK022895|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##BC056886|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.440327	CTCF.p2:23:0.440
chr7	28182396	28182535	reg1039359.p1	3.573	+	TSC_hg19_v1_chr7_+_27779811 U33821 BC050358	-402646	+	BC001764 TSC_hg19_v1_chr7_+_27779809	-402656	+	AK314292 TSC_hg19_v1_chr7_+_27779787 AK296720 BC024600 AK301064 AF090891 AK000098 AL136586	-402690	+	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	37736	-	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	37941	-	L05913 NM_182899	156474	+	U33821|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC050358|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK314292|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK296720|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##BC024600|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK301064|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AF090891|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AK000098|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##AL136586|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5	0.675044	CTCF.p2:-42:0.675
chr15	31556280	31556347	reg1031605.p1	3.572	+	NM_001243538	-33264	-	GQ502181 HM135791 NM_001252020	-102885	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-162396	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	63025	+	AJ430383 NM_130901	391228	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	606516	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.0	
chr21	44817003	44817123	reg1041980.p1	3.572	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-227889	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-289379	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-289438	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	28926	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	29932	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	262299	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr2	25524486	25524585	reg1040764.p1	3.572	+	TSC_hg19_v1_chr2_-_25475127 AF480163 NM_153759	-49329	-	TSC_hg19_v1_chr2_-_25468920 AK025230	-55557	-	TSC_hg19_v1_chr2_-_25467080 BC023612	-57400	-	TSC_hg19_v1_chr2_-_25536762 AB527956 EU446951	12272	-	AF067972 TSC_hg19_v1_chr2_-_25564801 BC043617 NM_022552	40264	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	40793	-	AF480163|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_153759|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##EU446951|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF067972|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC043617|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_022552|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.0	
chr5	139029107	139029173	reg1022061.p1	3.572	+	TSC_hg19_v1_chr5_+_139028524 AK001782	-632	+	TSC_hg19_v1_chr5_+_139028290 AB097005 AB097032 NM_016463	-973	+	BC024040 BC041013 TSC_hg19_v1_chr5_+_139027968 BC050046 BC017439	-1156	+	BC002490 TSC_hg19_v1_chr5_+_139060088 AB463548 GQ379202 AK314420	30944	+	AF151029 TSC_hg19_v1_chr5_+_139060229	31072	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	31252	+	AK001782|CXXC5|51523|CXXC finger protein 5##AB097005|CXXC5|51523|CXXC finger protein 5##AB097032|CXXC5|51523|CXXC finger protein 5##NM_016463|CXXC5|51523|CXXC finger protein 5##BC024040|CXXC5|51523|CXXC finger protein 5##BC041013|CXXC5|51523|CXXC finger protein 5##BC050046|CXXC5|51523|CXXC finger protein 5##BC017439|CXXC5|51523|CXXC finger protein 5##BC002490|CXXC5|51523|CXXC finger protein 5##GQ379202|CXXC5|51523|CXXC finger protein 5##AK314420|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5	0.0	
chr5	78321145	78321234	reg1006701.p2	3.572	+	NM_000046	-38833	-	TSC_hg19_v1_chr5_-_78281699 BC029051 NM_198709	-39463	-	TSC_hg19_v1_chr5_-_78281630 M32373	-39593	-	TSC_hg19_v1_chr5_-_78365450 AF111858 AK057641 NM_013391 AK300894 AK303873 AK314736	44260	-	NM_001178005 NM_017614 TSC_hg19_v1_chr5_+_78365558	44365	+	AF257473 TSC_hg19_v1_chr5_+_78365591 AK298298 AK315520 BC020665 DQ891370 DQ894550 AB590411 CU676622	44404	+	NM_000046|ARSB|411|arylsulfatase B##BC029051|ARSB|411|arylsulfatase B##NM_198709|ARSB|411|arylsulfatase B##M32373|ARSB|411|arylsulfatase B##AF111858|DMGDH|29958|dimethylglycine dehydrogenase##AK057641|DMGDH|29958|dimethylglycine dehydrogenase##NM_013391|DMGDH|29958|dimethylglycine dehydrogenase##AK300894|DMGDH|29958|dimethylglycine dehydrogenase##AK303873|DMGDH|29958|dimethylglycine dehydrogenase##AK314736|DMGDH|29958|dimethylglycine dehydrogenase##NM_001178005|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##NM_017614|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AF257473|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK298298|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##AK315520|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##BC020665|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ891370|BHMT2|23743|betaine--homocysteine S-methyltransferase 2##DQ894550|BHMT2|23743|betaine--homocysteine S-methyltransferase 2	0.0	
chr6	106440345	106440474	reg1035014.p1	3.572	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-589414	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-589451	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-589563	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	93787	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	93826	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	106395	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.0	
chr9	132172583	132172699	reg1036753.p1	3.572	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-89346	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-232101	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-232134	-	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	78713	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	78800	+	BC112353 AK093122 AX747938 NM_199350	210396	-	AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50	0.0	
chr9	136063785	136063874	reg1030707.p1	3.572	+	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	-24532	-	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	-39143	-	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	-67330	-	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	20791	-	AF134412 AF134413 AF134414 AF134415 AF134416 BC069595 BC069605 BC069814 BC111575 DQ139865 FR691751 FR691752 J05175 JN791441 CU686922 AK302203 TSC_hg19_v1_chr9_-_136150618	86785	-	NM_020469 TSC_hg19_v1_chr9_-_136150638	86808	-	AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B##AF134412|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134413|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134414|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134415|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134416|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069595|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069605|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069814|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC111575|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##DQ139865|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691751|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691752|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##J05175|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##JN791441|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AK302203|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##NM_020469|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)	0.240361	CTCF.p2:-26:0.240
chr9	26892339	26892449	reg1036304.p1	3.572	+	AK131322 NM_001004352	-825722	+	NM_001004125	-1213539	-	BC017510 TSC_hg19_v1_chr9_-_25678278 BC046919 AY168647 BC110824	-1214061	-	AB590748 CU687198 BC071953 TSC_hg19_v1_chr9_-_26892779 AK023719 BC014658 NM_001167575 NM_024828	375	-	EU176453 EU176795 AB385043 TSC_hg19_v1_chr9_-_26947158 BC032551 AK022761	54710	-	TSC_hg19_v1_chr9_-_26947165 AK001642	54774	-	AK131322|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004352|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004125|TUSC1|286319|tumor suppressor candidate 1##BC017510|TUSC1|286319|tumor suppressor candidate 1##BC046919|TUSC1|286319|tumor suppressor candidate 1##AY168647|TUSC1|286319|tumor suppressor candidate 1##BC110824|TUSC1|286319|tumor suppressor candidate 1##BC071953|C9orf82|79886|chromosome 9 open reading frame 82##AK023719|C9orf82|79886|chromosome 9 open reading frame 82##BC014658|C9orf82|79886|chromosome 9 open reading frame 82##NM_001167575|C9orf82|79886|chromosome 9 open reading frame 82##NM_024828|C9orf82|79886|chromosome 9 open reading frame 82##EU176453|PLAA|9373|phospholipase A2-activating protein##EU176795|PLAA|9373|phospholipase A2-activating protein##BC032551|PLAA|9373|phospholipase A2-activating protein##AK022761|PLAA|9373|phospholipase A2-activating protein##AK001642|PLAA|9373|phospholipase A2-activating protein	0.0	
chr10	112440798	112440930	reg1009219.p1	3.571	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	-36735	+	AF067163 TSC_hg19_v1_chr10_+_112344155	-96749	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	-113372	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	190748	+	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	190850	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	237832	-	EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20##AF067163|SMC3|9126|structural maintenance of chromosomes 3##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1	0.0	
chr10	125859216	125859362	reg1031178.p2	3.571	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	-6136	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-7390	-	BC137492 BC146862 AY358565 NM_198148	-207793	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	248184	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	248229	-	NM_001146340 TSC_hg19_v1_chr10_-_126138606	279288	-	BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##NM_001146340|NKX1-2|390010|NK1 homeobox 2	0.0	
chr11	4514397	4514566	reg1009069.p1	3.571	+	BC137056 BC137059 NM_001005171	-4373	+	BC137247 BC137248 NM_001005172	-43957	+	TSC_hg19_v1_chr11_-_4414904 BC010861 M62800 AK225564 NM_003141	-99575	-	AB463978 NM_001004137	51937	+	AF439154 NM_144663 AB528787	84568	-	BC136921 BC151144 NM_001005170	93539	+	BC137056|OR52K1|390036|olfactory receptor, family 52, subfamily K, member 1##BC137059|OR52K1|390036|olfactory receptor, family 52, subfamily K, member 1##NM_001005171|OR52K1|390036|olfactory receptor, family 52, subfamily K, member 1##BC137247|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##BC137248|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##NM_001005172|OR52K2|119774|olfactory receptor, family 52, subfamily K, member 2##BC010861|TRIM21|6737|tripartite motif containing 21##M62800|TRIM21|6737|tripartite motif containing 21##AK225564|TRIM21|6737|tripartite motif containing 21##NM_003141|TRIM21|6737|tripartite motif containing 21##NM_001004137|OR52M1|119772|olfactory receptor, family 52, subfamily M, member 1##AF439154|C11orf40|143501|chromosome 11 open reading frame 40##NM_144663|C11orf40|143501|chromosome 11 open reading frame 40##BC136921|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##BC151144|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2##NM_001005170|OR52I2|143502|olfactory receptor, family 52, subfamily I, member 2	0.951406	CTCF.p2:-27:0.951
chr11	67381757	67381862	reg1028096.p2	3.571	+	BC007619 TSC_hg19_v1_chr11_+_67377037	-4828	+	NM_001166102 NM_007103 TSC_hg19_v1_chr11_+_67374428 AF092131 AF053070 BC008146 AK310537 AK223061 AK293522 AK300726 BC015645 AB590249 CR456739 CU677379 CU678877 DQ893236 DQ896566 AK316122	-7408	+	TSC_hg19_v1_chr11_+_67351285 AY887902 BC010915 BC044846 X15480 U62589 U30897	-30520	+	TSC_hg19_v1_chr11_-_67397423 AK123561 BC018644 NM_001243750 NM_181843	15594	-	BC113485 BC113487 AY229977 NM_005995	25218	-	AY032593 AY040761 AY169233 BC008689 NM_080658	36309	-	BC007619|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_001166102|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##NM_007103|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF092131|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AF053070|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC008146|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK310537|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK223061|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK293522|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK300726|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC015645|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##CR456739|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ893236|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##DQ896566|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##AK316122|NDUFV1|4723|NADH dehydrogenase (ubiquinone) flavoprotein 1, 51kDa##BC010915|GSTP1|2950|glutathione S-transferase pi 1##BC044846|GSTP1|2950|glutathione S-transferase pi 1##X15480|GSTP1|2950|glutathione S-transferase pi 1##U62589|GSTP1|2950|glutathione S-transferase pi 1##U30897|GSTP1|2950|glutathione S-transferase pi 1##AK123561|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC018644|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_001243750|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##NM_181843|NUDT8|254552|nudix (nucleoside diphosphate linked moiety X)-type motif 8##BC113485|TBX10|347853|T-box 10##BC113487|TBX10|347853|T-box 10##AY229977|TBX10|347853|T-box 10##NM_005995|TBX10|347853|T-box 10##AY032593|ACY3|91703|aspartoacylase (aminocyclase) 3##AY040761|ACY3|91703|aspartoacylase (aminocyclase) 3##AY169233|ACY3|91703|aspartoacylase (aminocyclase) 3##BC008689|ACY3|91703|aspartoacylase (aminocyclase) 3##NM_080658|ACY3|91703|aspartoacylase (aminocyclase) 3	0.983233	CTCF.p2:4:0.983
chr12	7691334	7691409	reg1036989.p2	3.571	+	DQ058615 TSC_hg19_v1_chr12_-_7656374 BC051281 AK226017 Z22968 Z22969 Z22970 Z22971 NM_004244 NM_203416	-35021	-	GQ397482 AY358856 AK303372 AF264014 NM_174941 BC104962 BC104964	-94634	-	NM_001080454	-234444	+	U72890 L25877 U72891 BC101405 BC101404 BC101972 BC096158 BC096159 BC096160 BC096161 BC101973 BC144708 NM_001644	127113	-	CU689052 DQ892661 DQ895901 AF110641 AF263538 NM_020634 BC030959 AY358875	156985	-	AY317075 NM_199286 BC125145	172702	+	DQ058615|CD163|9332|CD163 molecule##BC051281|CD163|9332|CD163 molecule##AK226017|CD163|9332|CD163 molecule##Z22968|CD163|9332|CD163 molecule##Z22969|CD163|9332|CD163 molecule##Z22970|CD163|9332|CD163 molecule##Z22971|CD163|9332|CD163 molecule##NM_004244|CD163|9332|CD163 molecule##NM_203416|CD163|9332|CD163 molecule##GQ397482|CD163L1|283316|CD163 molecule-like 1##AK303372|CD163L1|283316|CD163 molecule-like 1##AF264014|CD163L1|283316|CD163 molecule-like 1##NM_174941|CD163L1|283316|CD163 molecule-like 1##BC104962|CD163L1|283316|CD163 molecule-like 1##BC104964|CD163L1|283316|CD163 molecule-like 1##NM_001080454|ACSM4|341392|acyl-CoA synthetase medium-chain family member 4##U72890|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##L25877|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##U72891|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101405|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101404|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101972|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096158|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096159|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096160|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC096161|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC101973|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##BC144708|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##NM_001644|APOBEC1|339|apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1##DQ892661|GDF3|9573|growth differentiation factor 3##DQ895901|GDF3|9573|growth differentiation factor 3##AF110641|GDF3|9573|growth differentiation factor 3##AF263538|GDF3|9573|growth differentiation factor 3##NM_020634|GDF3|9573|growth differentiation factor 3##BC030959|GDF3|9573|growth differentiation factor 3##AY358875|GDF3|9573|growth differentiation factor 3##AY317075|DPPA3|359787|developmental pluripotency associated 3##NM_199286|DPPA3|359787|developmental pluripotency associated 3##BC125145|STELLAR|400206|developmental pluripotency associated 3 pseudogene	0.0	
chr12	8148138	8148292	reg1000479.p2	3.571	+	CR457413 CU691674 DQ891118 DQ894297 DQ894299 AB209607 BC039196 AK304509 AK298673 AK312386 M20681 TSC_hg19_v1_chr12_-_8088888 NM_006931	-59449	-	AK299037 AK316238 TSC_hg19_v1_chr12_-_8043786	-104447	-	AK126026 AK122783 TSC_hg19_v1_chr12_-_8025469 AK302881 AF481878 BC060766 AF481879 NM_153449	-122749	-	TSC_hg19_v1_chr12_+_8185313 BC032608 NM_018416	37275	+	TSC_hg19_v1_chr12_-_8218956 U28488 AK290242 AK312458 BC020742 NM_004054 AK223388	70738	-	TSC_hg19_v1_chr12_-_8219032 U62027	70801	-	CR457413|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ891118|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894297|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##DQ894299|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AB209607|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##BC039196|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK304509|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK298673|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK312386|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##M20681|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##NM_006931|SLC2A3|6515|solute carrier family 2 (facilitated glucose transporter), member 3##AK299037|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK316238|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK126026|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK122783|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AK302881|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AF481878|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##BC060766|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##AF481879|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##NM_153449|SLC2A14|144195|solute carrier family 2 (facilitated glucose transporter), member 14##NM_018416|FOXJ2|55810|forkhead box J2##U28488|C3AR1|719|complement component 3a receptor 1##AK290242|C3AR1|719|complement component 3a receptor 1##AK312458|C3AR1|719|complement component 3a receptor 1##BC020742|C3AR1|719|complement component 3a receptor 1##NM_004054|C3AR1|719|complement component 3a receptor 1##AK223388|C3AR1|719|complement component 3a receptor 1##U62027|C3AR1|719|complement component 3a receptor 1	0.0	
chr1	51426094	51426186	reg1030094.p2	3.571	+	TSC_hg19_v1_chr1_-_51425930 BC004970 NM_007051	-207	-	TSC_hg19_v1_chr1_-_51425834 AK292840	-302	-	TSC_hg19_v1_chr1_-_51425796 AJ271408	-341	-	TSC_hg19_v1_chr1_+_51434315 AF041248 NM_001262	8162	+	TSC_hg19_v1_chr1_+_51434375 BC000598 BC005041	8252	+	TSC_hg19_v1_chr1_+_51434477 AK021794 BC017036	8338	+	BC004970|FAF1|11124|Fas (TNFRSF6) associated factor 1##NM_007051|FAF1|11124|Fas (TNFRSF6) associated factor 1##AK292840|FAF1|11124|Fas (TNFRSF6) associated factor 1##AJ271408|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF041248|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##NM_001262|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##BC000598|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##BC005041|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##AK021794|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##BC017036|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	0.0	
chr15	68502242	68502379	reg1009565.p1	3.571	+	TSC_hg19_v1_chr15_-_68498423 BX640817 NM_001031733 NM_033429	-3894	-	TSC_hg19_v1_chr15_-_68497633 BX640702 BC009516 AK092628 AK296804 AX747637	-4673	-	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	-155649	+	CR457244 DQ891480 EU176598 BC013130 BC010849 TSC_hg19_v1_chr15_-_68522011 AK291175 AK293155 AK000568 AK027604 NM_017882	19696	-	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	67783	+	TSC_hg19_v1_chr15_+_68570434 AK290167	68114	+	BX640817|CALML4|91860|calmodulin-like 4##NM_001031733|CALML4|91860|calmodulin-like 4##NM_033429|CALML4|91860|calmodulin-like 4##BX640702|CALML4|91860|calmodulin-like 4##BC009516|CALML4|91860|calmodulin-like 4##AK092628|CALML4|91860|calmodulin-like 4##AK296804|CALML4|91860|calmodulin-like 4##BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1##CR457244|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##DQ891480|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##EU176598|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC013130|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC010849|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK291175|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK293155|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK000568|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK027604|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##NM_017882|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)	0.0	
chr16	56945911	56946013	reg1033595.p2	3.571	+	AK315298 NM_000339 NM_001126107 NM_001126108 AK223133 X91220 U44128 AB463268	-46830	+	AK294176 NM_001242796	-128573	+	NM_001242795 AK056637 TSC_hg19_v1_chr16_+_56815740	-130227	+	NM_001010989 NM_001010990 NM_014685	19785	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	20179	+	M30185 AK297699 NM_000078 TSC_hg19_v1_chr16_+_56995861 AK291586 BC025739 EU176529 CU693046 BT020064 M83573	49875	+	AK315298|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_000339|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126107|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126108|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK223133|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##X91220|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##U44128|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK294176|NUP93|9688|nucleoporin 93kDa##NM_001242796|NUP93|9688|nucleoporin 93kDa##NM_001242795|NUP93|9688|nucleoporin 93kDa##AK056637|NUP93|9688|nucleoporin 93kDa##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##M30185|CETP|1071|cholesteryl ester transfer protein, plasma##AK297699|CETP|1071|cholesteryl ester transfer protein, plasma##NM_000078|CETP|1071|cholesteryl ester transfer protein, plasma##AK291586|CETP|1071|cholesteryl ester transfer protein, plasma##BC025739|CETP|1071|cholesteryl ester transfer protein, plasma##EU176529|CETP|1071|cholesteryl ester transfer protein, plasma##BT020064|CETP|1071|cholesteryl ester transfer protein, plasma##M83573|CETP|1071|cholesteryl ester transfer protein, plasma	0.0	
chr16	85853129	85853309	reg1002067.p2	3.571	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-19884	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-19914	+	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	-19986	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	79567	+	TSC_hg19_v1_chr16_-_86542463 AK091834	689245	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	690937	+	BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1	0.0	
chr2	123126251	123126382	reg1040218.p1	3.571	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-613079	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-631851	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-718671	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	1656548	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	4287391	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	4287476	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.990434	CTCF.p2:24:0.990
chr4	84101624	84101804	reg1035524.p1	3.571	+	TSC_hg19_v1_chr4_-_84035912 AK000140 NM_001130715 NM_016619	-65787	-	AF208846 EU570985 EU570986 TSC_hg19_v1_chr4_-_84035890 AJ422147	-65823	-	BC012205 NM_001130716	-70711	-	TSC_hg19_v1_chr4_-_84205924 DQ895928 EU176380 BC008804 AK023076	104201	-	TSC_hg19_v1_chr4_-_84205952 AK129583 AK300972 BC020728 AJ621061 NM_015697	104289	-	AJ627581 TSC_hg19_v1_chr4_-_84255962 AF084467 AM419200 AY948074 CU690802 AF152376 NM_001199830 AF165154 AK075400	154232	-	AK000140|PLAC8|51316|placenta-specific 8##NM_001130715|PLAC8|51316|placenta-specific 8##NM_016619|PLAC8|51316|placenta-specific 8##AF208846|PLAC8|51316|placenta-specific 8##EU570985|PLAC8|51316|placenta-specific 8##EU570986|PLAC8|51316|placenta-specific 8##AJ422147|PLAC8|51316|placenta-specific 8##BC012205|PLAC8|51316|placenta-specific 8##NM_001130716|PLAC8|51316|placenta-specific 8##DQ895928|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##EU176380|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC008804|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK023076|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK129583|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK300972|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC020728|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AJ621061|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##NM_015697|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AF084467|HPSE|10855|heparanase##AM419200|HPSE|10855|heparanase##AY948074|HPSE|10855|heparanase##AF152376|HPSE|10855|heparanase##NM_001199830|HPSE|10855|heparanase##AF165154|HPSE|10855|heparanase##AK075400|HPSE|10855|heparanase	0.060864	
chr5	169261212	169261344	reg1043664.p1	3.571	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-196978	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-197034	+	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	-250557	+	AK055998 NM_001129891	146465	-	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	271693	+	BC030767 NM_001102609 BC092511	398718	+	D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58	0.0	
chr6	45345836	45345982	reg1032850.p1	3.571	+	AF073930 NM_003599 TSC_hg19_v1_chr6_-_45345614 AK303838 BC035816 BC050384 NM_181356 AK313874	-234	-	NM_001015051 NM_001024630 AF053952	-49853	+	TSC_hg19_v1_chr6_+_44355461 AK128737 AK299738 BC001568 AB007892 AB590067 CU674768 DQ891623 DQ894814 U86753	-990409	+	TSC_hg19_v1_chr6_+_45389825 NM_004348	43956	+	TSC_hg19_v1_chr6_+_45390325 BC108919 BC108920	44396	+	TSC_hg19_v1_chr6_+_45390379 L40992	44503	+	AF073930|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_003599|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK303838|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC035816|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##BC050384|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_181356|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##AK313874|SUPT3H|8464|suppressor of Ty 3 homolog (S. cerevisiae)##NM_001015051|RUNX2|860|runt-related transcription factor 2##NM_001024630|RUNX2|860|runt-related transcription factor 2##AF053952|RUNX2|860|runt-related transcription factor 2##AK128737|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AK299738|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##BC001568|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##AB007892|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ891623|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##DQ894814|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##U86753|CDC5L|988|CDC5 cell division cycle 5-like (S. pombe)##NM_004348|RUNX2|860|runt-related transcription factor 2##BC108919|RUNX2|860|runt-related transcription factor 2##BC108920|RUNX2|860|runt-related transcription factor 2##L40992|RUNX2|860|runt-related transcription factor 2	0.0	
chr7	27701913	27702026	reg1039100.p1	3.571	+	AK299188 NM_001989	-419806	+	BC075791 NM_000522 TSC_hg19_v1_chr7_-_27239748	-462225	-	TSC_hg19_v1_chr7_+_27225046 BC025338	-476936	+	TSC_hg19_v1_chr7_-_27702469 AF529362 DQ894677 AK316605 BC020167 AB050000 BC032324	459	-	TSC_hg19_v1_chr7_-_27702556 AK311650 NM_152740	608	-	AK299729 NM_001206901	77022	+	AK299188|EVX1|2128|even-skipped homeobox 1##NM_001989|EVX1|2128|even-skipped homeobox 1##BC075791|HOXA13|3209|homeobox A13##NM_000522|HOXA13|3209|homeobox A13##BC025338|HOXA11-AS1|221883|HOXA11 antisense RNA 1 (non-protein coding)##AF529362|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##DQ894677|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AK316605|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##BC020167|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AB050000|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##BC032324|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##NM_152740|HIBADH|11112|3-hydroxyisobutyrate dehydrogenase##AK299729|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1##NM_001206901|TAX1BP1|8887|Tax1 (human T-cell leukemia virus type I) binding protein 1	0.0	
chr7	65263514	65263634	reg1027900.p1	3.571	+	TSC_hg19_v1_chr7_-_65235746 BC066990	-27829	-	TSC_hg19_v1_chr7_+_65216060 BC052238 BC073761 BC122874 BC119782	-47491	+	TSC_hg19_v1_chr7_-_65215912 BX647963	-47656	-	TSC_hg19_v1_chr7_+_65338277 BC027734 NM_173517 BX647631 AY423045	74675	+	AK289522 TSC_hg19_v1_chr7_+_65338347	74771	+	TSC_hg19_v1_chr7_+_65338352 AK304077	74802	+	BC066990|LOC441242|441242|uncharacterized LOC441242##BC052238|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC073761|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC122874|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC119782|CCT6P1|643253|chaperonin containing TCP1, subunit 6 (zeta) pseudogene 1##BC027734|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##NM_173517|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##BX647631|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##AY423045|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##AK289522|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1##AK304077|VKORC1L1|154807|vitamin K epoxide reductase complex, subunit 1-like 1	0.0	
chr8	102778218	102778331	reg1041616.p1	3.571	+	TSC_hg19_v1_chr8_+_102504840 AK023844 AK292853 BC069618 BC069633 BC069638 BC129822 BC129823	-273364	+	TSC_hg19_v1_chr8_+_102504667 NM_024915 AK296817 AK310221	-273609	+	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	-560320	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	24909	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	24926	-	NM_032041	25164	-	AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##NM_032041|NCALD|83988|neurocalcin delta	0.0	
chrX	66775589	66775679	reg1033255.p2	3.571	+	TSC_hg19_v1_chrX_+_66766350 M20260	-9263	+	TSC_hg19_v1_chrX_+_66763874 NM_000044	-11759	+	AK314881 NM_001199687	-916511	-	NM_001011645	13048	+	TSC_hg19_v1_chrX_-_67653677 BC059393 NM_002547 AK309665 BC140763 AK295769 AJ001189 AK309696	877928	-	NM_001195214 NM_173834	942989	+	M20260|AR|367|androgen receptor##NM_000044|AR|367|androgen receptor##AK314881|EDA2R|60401|ectodysplasin A2 receptor##NM_001199687|EDA2R|60401|ectodysplasin A2 receptor##NM_001011645|AR|367|androgen receptor##BC059393|OPHN1|4983|oligophrenin 1##NM_002547|OPHN1|4983|oligophrenin 1##AK309665|OPHN1|4983|oligophrenin 1##BC140763|OPHN1|4983|oligophrenin 1##AK295769|OPHN1|4983|oligophrenin 1##AJ001189|OPHN1|4983|oligophrenin 1##AK309696|OPHN1|4983|oligophrenin 1##NM_001195214|YIPF6|286451|Yip1 domain family, member 6##NM_173834|YIPF6|286451|Yip1 domain family, member 6	0.0	
chrY	1274994	1275097	reg1039476.p2	3.571	+	NM_000451 NM_006883 U89331	-739967	+	AK293506 NM_013239	-977356	-	NM_018390 BC064136 BC005028 BC000888 BC032072	-1126938	+	AB052639 AF338733 AY775789 NM_001012288 AF142570 NM_022148 AK026800 AK225583 AK223303	6539	-	NM_001161529 NM_001161531 NM_001161532 NM_006140 NM_172245 NM_172246 NM_172249 AK293086 AK301395 BC071835 M64445 BC002635 AL833597 AK309630 L29348 L29349 U93096 X17648	62669	+	NM_001161530 NM_172247 M73832 DQ893104 DQ896376 AB590144 CU687176 DQ841258 X54935	76538	+	NM_000451|SHOX|6473|short stature homeobox##NM_006883|SHOX|6473|short stature homeobox##U89331|SHOX|6473|short stature homeobox##AK293506|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_013239|PPP2R3B|28227|protein phosphatase 2, regulatory subunit B'', beta##NM_018390|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC064136|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC005028|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC000888|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##BC032072|PLCXD1|55344|phosphatidylinositol-specific phospholipase C, X domain containing 1##AB052639|CRLF2|64109|cytokine receptor-like factor 2##AF338733|CRLF2|64109|cytokine receptor-like factor 2##AY775789|CRLF2|64109|cytokine receptor-like factor 2##NM_001012288|CRLF2|64109|cytokine receptor-like factor 2##AF142570|CRLF2|64109|cytokine receptor-like factor 2##NM_022148|CRLF2|64109|cytokine receptor-like factor 2##AK026800|CRLF2|64109|cytokine receptor-like factor 2##AK223303|CRLF2|64109|cytokine receptor-like factor 2##NM_001161529|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161531|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161532|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_006140|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172245|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172246|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172249|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK293086|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK301395|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC071835|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M64445|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##BC002635|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AL833597|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##AK309630|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29348|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##L29349|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##U93096|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X17648|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_001161530|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##NM_172247|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##M73832|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ893104|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ896376|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##DQ841258|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)##X54935|CSF2RA|1438|colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage)	0.0	
chr10	86373306	86373418	reg1036829.p1	3.570	+	TSC_hg19_v1_chr10_+_86184685 AK294321	-188667	+	AB032954 TSC_hg19_v1_chr10_+_86131668	-241744	+	TSC_hg19_v1_chr10_+_86088344 NM_018999 AK298966 BC030528	-284968	+	TSC_hg19_v1_chr10_-_88126251 AK293104 AK127168 BC039263 NM_017551	1752901	-	AB463350 TSC_hg19_v1_chr10_-_88281503 AB426821 AB426822 AB426823 AB426824 AB426825 AB426826 AB426827 AB426828 AB426829 AB426830 AB426831 AB426832 AB426833 AB426834 AB426835 AB426837 AB426838 AF479418 AB426836 AK290138	1908132	-	TSC_hg19_v1_chr10_-_88281532 BC150269 D87450 AB065003 NM_015045	1908168	-	AK294321|FAM190B|54462|family with sequence similarity 190, member B##AB032954|FAM190B|54462|family with sequence similarity 190, member B##NM_018999|FAM190B|54462|family with sequence similarity 190, member B##AK298966|FAM190B|54462|family with sequence similarity 190, member B##BC030528|FAM190B|54462|family with sequence similarity 190, member B##AK293104|GRID1|2894|glutamate receptor, ionotropic, delta 1##AK127168|GRID1|2894|glutamate receptor, ionotropic, delta 1##BC039263|GRID1|2894|glutamate receptor, ionotropic, delta 1##NM_017551|GRID1|2894|glutamate receptor, ionotropic, delta 1##AB426821|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426822|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426823|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426824|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426825|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426826|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426827|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426828|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426829|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426830|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426831|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426832|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426833|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426834|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426835|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426837|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426838|WAPAL|23063|wings apart-like homolog (Drosophila)##AF479418|WAPAL|23063|wings apart-like homolog (Drosophila)##AB426836|WAPAL|23063|wings apart-like homolog (Drosophila)##AK290138|WAPAL|23063|wings apart-like homolog (Drosophila)##BC150269|WAPAL|23063|wings apart-like homolog (Drosophila)##D87450|WAPAL|23063|wings apart-like homolog (Drosophila)##AB065003|WAPAL|23063|wings apart-like homolog (Drosophila)##NM_015045|WAPAL|23063|wings apart-like homolog (Drosophila)	0.844765	CTCF.p2:-14:0.845
chr18	23598043	23598151	reg1035048.p2	3.570	+	AJ518106 BC032869 TSC_hg19_v1_chr18_-_22932114 AK027354 AK293067 NM_015461	-665934	-	TSC_hg19_v1_chr18_-_22932105 BC113622 BC113648 BC143727	-666060	-	TSC_hg19_v1_chr18_-_22931121 AB385259	-666949	-	AB527567 EU832762 GQ129305 AB300354 AB300355 AB300356 AB300357 AF230662 AF244972 AF257500 AF343880 BC096221 BC096222 BC096223 BC096224 CR542088 CR542103 X79201 TSC_hg19_v1_chr18_-_23670574 AK304305 AK316302 AK316338 AK299082 AK307923 AK289510 NM_001007559 NM_005637 AK301504	72483	-	BC042820 NM_001025096 NM_001025097 NM_144662 BC025393 BC028371 BC028686 BC025389 BC047355 BC021713	115751	+	TSC_hg19_v1_chr18_+_23806444 NM_005640 AB234096	208320	+	AJ518106|ZNF521|25925|zinc finger protein 521##BC032869|ZNF521|25925|zinc finger protein 521##AK027354|ZNF521|25925|zinc finger protein 521##AK293067|ZNF521|25925|zinc finger protein 521##NM_015461|ZNF521|25925|zinc finger protein 521##BC113622|ZNF521|25925|zinc finger protein 521##BC113648|ZNF521|25925|zinc finger protein 521##BC143727|ZNF521|25925|zinc finger protein 521##EU832762|SS18|6760|synovial sarcoma translocation, chromosome 18##GQ129305|SS18|6760|synovial sarcoma translocation, chromosome 18##AF244972|SS18|6760|synovial sarcoma translocation, chromosome 18##AF343880|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096221|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096222|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096223|SS18|6760|synovial sarcoma translocation, chromosome 18##BC096224|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542088|SS18|6760|synovial sarcoma translocation, chromosome 18##CR542103|SS18|6760|synovial sarcoma translocation, chromosome 18##X79201|SS18|6760|synovial sarcoma translocation, chromosome 18##AK304305|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316302|SS18|6760|synovial sarcoma translocation, chromosome 18##AK316338|SS18|6760|synovial sarcoma translocation, chromosome 18##AK299082|SS18|6760|synovial sarcoma translocation, chromosome 18##AK307923|SS18|6760|synovial sarcoma translocation, chromosome 18##AK289510|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_001007559|SS18|6760|synovial sarcoma translocation, chromosome 18##NM_005637|SS18|6760|synovial sarcoma translocation, chromosome 18##AK301504|SS18|6760|synovial sarcoma translocation, chromosome 18##BC042820|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025096|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_001025097|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_144662|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025393|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028371|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC028686|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC025389|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC047355|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##BC021713|PSMA8|143471|proteasome (prosome, macropain) subunit, alpha type, 8##NM_005640|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa##AB234096|TAF4B|6875|TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa	0.532289	CTCF.p2:5:0.532
chr4	185209994	185210093	reg1034502.p2	3.570	+	BC035035 AY358676 AK057370 NM_153343	-70978	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-382132	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-382223	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	185638	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	360558	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	360790	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr9	9897143	9897247	reg1036595.p1	3.570	+	TSC_hg19_v1_chr9_+_8858136 AK094342	-1039062	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-1163276	-	TSC_hg19_v1_chr9_+_8713275 AY779046	-1183903	+	BC028038 NM_002839	715527	-	NM_000550 X51420 BC052608	2796230	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	2877821	+	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##AY779046|RPL18A|6142|ribosomal protein L18a##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150	0.0	
chr10	50385205	50385385	reg1028409.p1	3.569	+	BC029839 BC047597 NM_001164484	-43237	-	TSC_hg19_v1_chr10_-_50323537 BC041414 AK297931 AK056299 NM_001031746 NM_144984	-61772	-	NM_001006939 BC036722	-263015	-	DQ884399 TSC_hg19_v1_chr10_-_50396437 BC047724 BC104438 BC104439 NM_001010863 BC037922 BC042857 AK303891	11131	-	AK127811 NM_001135196 NM_199459 TSC_hg19_v1_chr10_+_50507214 AL833265	121916	+	NM_001080520	214611	-	BC029839|FAM170B|170370|family with sequence similarity 170, member B##BC047597|FAM170B|170370|family with sequence similarity 170, member B##NM_001164484|FAM170B|170370|family with sequence similarity 170, member B##BC041414|VSTM4|196740|V-set and transmembrane domain containing 4##AK297931|VSTM4|196740|V-set and transmembrane domain containing 4##AK056299|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001031746|VSTM4|196740|V-set and transmembrane domain containing 4##NM_144984|VSTM4|196740|V-set and transmembrane domain containing 4##NM_001006939|LRRC18|474354|leucine rich repeat containing 18##BC036722|LRRC18|474354|leucine rich repeat containing 18##DQ884399|C10orf128|170371|chromosome 10 open reading frame 128##BC047724|C10orf128|170371|chromosome 10 open reading frame 128##BC104438|C10orf128|170371|chromosome 10 open reading frame 128##BC104439|C10orf128|170371|chromosome 10 open reading frame 128##NM_001010863|C10orf128|170371|chromosome 10 open reading frame 128##BC037922|C10orf128|170371|chromosome 10 open reading frame 128##BC042857|C10orf128|170371|chromosome 10 open reading frame 128##AK127811|C10orf71|118461|chromosome 10 open reading frame 71##NM_001135196|C10orf71|118461|chromosome 10 open reading frame 71##NM_199459|C10orf71|118461|chromosome 10 open reading frame 71##AL833265|C10orf71|118461|chromosome 10 open reading frame 71##NM_001080520|DRGX|644168|dorsal root ganglia homeobox	0.873485	CTCF.p2:-16:0.873
chr10	69835419	69835510	reg1029305.p2	3.569	+	TSC_hg19_v1_chr10_-_69835055 NM_015601 NM_022079	-357	-	BC039600 TSC_hg19_v1_chr10_-_69835041 AK026808 AY221963 AY650032 AY650033 AY650034	-438	-	TSC_hg19_v1_chr10_-_69834956 AK292809 BC015043	-484	-	NM_032578 TSC_hg19_v1_chr10_+_69869249 AK027343 BX647637 AL832002 AL834247 BC142609 BC144333 BC144334	33874	+	BC032621 NM_145178 AB593108 AB593109	156397	-	AK312275 AB528615 TSC_hg19_v1_chr10_-_70066624 AK092826 AX747753	231150	-	NM_015601|HERC4|26091|hect domain and RLD 4##NM_022079|HERC4|26091|hect domain and RLD 4##BC039600|HERC4|26091|hect domain and RLD 4##AK026808|HERC4|26091|hect domain and RLD 4##AY221963|HERC4|26091|hect domain and RLD 4##AY650032|HERC4|26091|hect domain and RLD 4##AY650033|HERC4|26091|hect domain and RLD 4##AY650034|HERC4|26091|hect domain and RLD 4##AK292809|HERC4|26091|hect domain and RLD 4##BC015043|HERC4|26091|hect domain and RLD 4##NM_032578|MYPN|84665|myopalladin##AK027343|MYPN|84665|myopalladin##BX647637|MYPN|84665|myopalladin##AL832002|MYPN|84665|myopalladin##AL834247|MYPN|84665|myopalladin##BC142609|MYPN|84665|myopalladin##BC144333|MYPN|84665|myopalladin##BC144334|MYPN|84665|myopalladin##BC032621|ATOH7|220202|atonal homolog 7 (Drosophila)##NM_145178|ATOH7|220202|atonal homolog 7 (Drosophila)##AB593108|ATOH7|220202|atonal homolog 7 (Drosophila)##AB593109|ATOH7|220202|atonal homolog 7 (Drosophila)##AK312275|PBLD|64081|phenazine biosynthesis-like protein domain containing##AK092826|PBLD|64081|phenazine biosynthesis-like protein domain containing	0.0	
chr11	109383652	109383719	reg1039430.p2	3.569	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-90786	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-90842	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-847871	+	AK095101 TSC_hg19_v1_chr11_+_109963524	579843	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	580445	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	783628	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.0	
chr11	27528414	27528518	reg1030130.p2	3.569	+	TSC_hg19_v1_chr11_+_27528395 AY054401 AY054402 AY054404 AY513486	-77	+	AB385247 BC053907 TSC_hg19_v1_chr11_-_27528315 BC009774 AK223156 AL833601 AK002077 NM_018362	-154	-	TSC_hg19_v1_chr11_-_27494323 AB209743 AF257182 BC033039 NM_018490	-34162	-	EF689009 EF689010 NM_001143816 NM_170735	152729	-	AB038674 AY054399 AY054400 EF689017 EF689018 NM_170734	192730	-	AY054398 X60201 X91251 TSC_hg19_v1_chr11_-_27722003 EF689014 EF689015 EF689016 NM_001143813 NM_001143814 NM_001709	193538	-	AY054401|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY054402|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY054404|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##AY513486|BDNF-AS1|497258|BDNF antisense RNA 1 (non-protein coding)##BC053907|LIN7C|55327|lin-7 homolog C (C. elegans)##BC009774|LIN7C|55327|lin-7 homolog C (C. elegans)##AK223156|LIN7C|55327|lin-7 homolog C (C. elegans)##AL833601|LIN7C|55327|lin-7 homolog C (C. elegans)##AK002077|LIN7C|55327|lin-7 homolog C (C. elegans)##NM_018362|LIN7C|55327|lin-7 homolog C (C. elegans)##AB209743|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##AF257182|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##BC033039|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##NM_018490|LGR4|55366|leucine-rich repeat containing G protein-coupled receptor 4##EF689009|BDNF|627|brain-derived neurotrophic factor##EF689010|BDNF|627|brain-derived neurotrophic factor##NM_001143816|BDNF|627|brain-derived neurotrophic factor##NM_170735|BDNF|627|brain-derived neurotrophic factor##AB038674|BDNF|627|brain-derived neurotrophic factor##AY054399|BDNF|627|brain-derived neurotrophic factor##AY054400|BDNF|627|brain-derived neurotrophic factor##EF689017|BDNF|627|brain-derived neurotrophic factor##EF689018|BDNF|627|brain-derived neurotrophic factor##NM_170734|BDNF|627|brain-derived neurotrophic factor##AY054398|BDNF|627|brain-derived neurotrophic factor##X60201|BDNF|627|brain-derived neurotrophic factor##X91251|BDNF|627|brain-derived neurotrophic factor##EF689014|BDNF|627|brain-derived neurotrophic factor##EF689015|BDNF|627|brain-derived neurotrophic factor##EF689016|BDNF|627|brain-derived neurotrophic factor##NM_001143813|BDNF|627|brain-derived neurotrophic factor##NM_001143814|BDNF|627|brain-derived neurotrophic factor##NM_001709|BDNF|627|brain-derived neurotrophic factor	0.0	
chr1	185126188	185126254	reg1038419.p1	3.569	+	AK302166 TSC_hg19_v1_chr1_-_185126203 NM_001202423	-30	-	TSC_hg19_v1_chr1_-_185126086 AK226103 CU692260 AF288399 AK074936 BC045535 BC053961 BC026883 BC035430 BC039738 AK098359 AK312801 AK074993 NM_030934	-254	-	TSC_hg19_v1_chr1_+_185014679 AK091574 AX747069 BC012583 AK314793	-111547	+	NM_001105518 AK127980 TSC_hg19_v1_chr1_+_185126298 BC030781 NM_017673 AK315802	49	+	TSC_hg19_v1_chr1_+_185126418 AK291443	175	+	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	160098	-	AK302166|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##NM_001202423|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK226103|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AF288399|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK074936|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##BC045535|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##BC053961|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##BC026883|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##BC035430|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##BC039738|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK098359|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK312801|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK074993|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##NM_030934|TRMT1L|81627|TRM1 tRNA methyltransferase 1-like##AK091574|RNF2|6045|ring finger protein 2##BC012583|RNF2|6045|ring finger protein 2##AK314793|RNF2|6045|ring finger protein 2##NM_001105518|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK127980|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##BC030781|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##NM_017673|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK315802|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein	0.0	
chr12	111706726	111706833	reg1038880.p1	3.569	+	BC151245 NM_015267 AB006631 AF271236	-234907	+	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	-348401	-	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-421976	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	100067	-	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	100131	-	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	136970	+	BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3	0.727493	CTCF.p2:-27:0.727
chr12	96915806	96915925	reg1042975.p1	3.569	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-121548	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	-121882	-	TSC_hg19_v1_chr12_+_96588254 BC017371	-327598	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	385166	+	BC027605 NM_001135175	385378	+	TSC_hg19_v1_chr12_-_98897622 AK126817	1981762	-	AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK126817|LOC643770|643770|uncharacterized LOC643770	0.0	
chr15	31631213	31631337	reg1033748.p2	3.569	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-11937	+	NM_001243538	-108226	-	GQ502181 HM135791 NM_001252020	-177847	-	AJ430383 NM_130901	316266	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	531554	-	TSC_hg19_v1_chr15_-_32162898 AK126002	531668	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.034721	
chr15	44969897	44969963	reg1032608.p2	3.569	+	BC036924 NM_001145112	-845	-	TSC_hg19_v1_chr15_-_44955887 BC150640 NM_001160227 NM_025137	-14050	-	TSC_hg19_v1_chr15_-_44955849 AB385508 AB470308 AB470309 AB470310 AB058743 BC153879 BC047416	-14086	-	AK130783 TSC_hg19_v1_chr15_-_45003540	33616	-	TSC_hg19_v1_chr15_+_45003710 NM_004048 AK303560 AK315776 S82297 S82300 S54761 BC032589 BC064910 X07621 AY007153 AB021288 AB463439 AY187687 CR457066 DQ839493 DQ839494 DQ884406 DQ890551 DQ893711 V00567	33791	+	AK311550 TSC_hg19_v1_chr15_+_45021275 DQ232883	51323	+	BC036924|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##NM_001145112|PATL2|197135|protein associated with topoisomerase II homolog 2 (yeast)##BC150640|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_001160227|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_025137|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470308|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470309|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB470310|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##AB058743|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC153879|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##BC047416|SPG11|80208|spastic paraplegia 11 (autosomal recessive)##NM_004048|B2M|567|beta-2-microglobulin##AK303560|B2M|567|beta-2-microglobulin##AK315776|B2M|567|beta-2-microglobulin##S82297|B2M|567|beta-2-microglobulin##S82300|B2M|567|beta-2-microglobulin##S54761|B2M|567|beta-2-microglobulin##BC032589|B2M|567|beta-2-microglobulin##BC064910|B2M|567|beta-2-microglobulin##X07621|B2M|567|beta-2-microglobulin##AY007153|B2M|567|beta-2-microglobulin##AB021288|B2M|567|beta-2-microglobulin##AY187687|B2M|567|beta-2-microglobulin##CR457066|B2M|567|beta-2-microglobulin##DQ839493|B2M|567|beta-2-microglobulin##DQ839494|B2M|567|beta-2-microglobulin##DQ884406|B2M|567|beta-2-microglobulin##DQ890551|B2M|567|beta-2-microglobulin##DQ893711|B2M|567|beta-2-microglobulin##V00567|B2M|567|beta-2-microglobulin##DQ232883|TRIM69|140691|tripartite motif containing 69	0.0	
chr16	1660848	1660937	reg1038561.p2	3.569	+	TSC_hg19_v1_chr16_-_1660720 AB011162 AK299035 AK299115	-200	-	BC105785 AY358178 NM_024600	-76697	+	TSC_hg19_v1_chr16_+_1583666 BC020425	-77196	+	TSC_hg19_v1_chr16_-_1662054 NM_014714	1146	-	NM_020825	3748	+	AK309909 AK296998 NM_144570 TSC_hg19_v1_chr16_+_1728279 AK023154	67376	+	AB011162|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##AK299035|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##AK299115|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##BC105785|TMEM204|79652|transmembrane protein 204##AY358178|TMEM204|79652|transmembrane protein 204##NM_024600|TMEM204|79652|transmembrane protein 204##BC020425|TMEM204|79652|transmembrane protein 204##NM_014714|IFT140|9742|intraflagellar transport 140 homolog (Chlamydomonas)##NM_020825|CRAMP1L|57585|Crm, cramped-like (Drosophila)##AK309909|HN1L|90861|hematological and neurological expressed 1-like##AK296998|HN1L|90861|hematological and neurological expressed 1-like##NM_144570|HN1L|90861|hematological and neurological expressed 1-like##AK023154|HN1L|90861|hematological and neurological expressed 1-like	0.0	
chr20	8291128	8291219	reg1042281.p1	3.569	+	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	-178143	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-290701	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-290766	-	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	758510	+	AK307482 TSC_hg19_v1_chr20_+_9049806	758625	+	NM_182797 BC117458 BC143868	906885	+	AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4##NM_182797|PLCB4|5332|phospholipase C, beta 4##BC117458|PLCB4|5332|phospholipase C, beta 4##BC143868|PLCB4|5332|phospholipase C, beta 4	0.0	
chr2	198126537	198126717	reg1039863.p1	3.569	+	AB128038 AB527353 TSC_hg19_v1_chr2_-_197791382 BX648642 AK022439 NM_024989 BC040517	-335183	-	BC137150 BC137151 AY358249 NM_213608	-451690	-	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	-462214	-	TSC_hg19_v1_chr2_-_198175411 CU677791 CU687782 AK124039	48755	-	TSC_hg19_v1_chr2_-_198175459 BC063622	48846	-	BC016985 TSC_hg19_v1_chr2_-_198175505 AK301209 NM_001195144 NM_153697	48892	-	AB128038|PGAP1|80055|post-GPI attachment to proteins 1##BX648642|PGAP1|80055|post-GPI attachment to proteins 1##AK022439|PGAP1|80055|post-GPI attachment to proteins 1##NM_024989|PGAP1|80055|post-GPI attachment to proteins 1##BC040517|PGAP1|80055|post-GPI attachment to proteins 1##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK124039|ANKRD44|91526|ankyrin repeat domain 44##BC063622|ANKRD44|91526|ankyrin repeat domain 44##BC016985|ANKRD44|91526|ankyrin repeat domain 44##AK301209|ANKRD44|91526|ankyrin repeat domain 44##NM_001195144|ANKRD44|91526|ankyrin repeat domain 44##NM_153697|ANKRD44|91526|ankyrin repeat domain 44	0.0	
chr22	24442634	24442733	reg1027670.p2	3.569	+	TSC_hg19_v1_chr22_+_24407870 AB002328 BC041659	-34788	+	TSC_hg19_v1_chr22_+_24407863 NM_001199281 BC013099 BC028969	-34843	+	TSC_hg19_v1_chr22_+_24407753 AF072441 NM_001201429 NM_012295 AK307522 BC054497	-34908	+	TSC_hg19_v1_chr22_+_24551954 AL390166	109274	+	TSC_hg19_v1_chr22_+_24577424 AK026431	134744	+	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	134761	+	AB002328|CABIN1|23523|calcineurin binding protein 1##BC041659|CABIN1|23523|calcineurin binding protein 1##NM_001199281|CABIN1|23523|calcineurin binding protein 1##BC013099|CABIN1|23523|calcineurin binding protein 1##BC028969|CABIN1|23523|calcineurin binding protein 1##AF072441|CABIN1|23523|calcineurin binding protein 1##NM_001201429|CABIN1|23523|calcineurin binding protein 1##NM_012295|CABIN1|23523|calcineurin binding protein 1##AK307522|CABIN1|23523|calcineurin binding protein 1##BC054497|CABIN1|23523|calcineurin binding protein 1##AL390166|CABIN1|23523|calcineurin binding protein 1##AK026431|SUSD2|56241|sushi domain containing 2##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2	0.0	
chr22	44439820	44439989	reg1024941.p1	3.569	+	AK308443 NM_001243386	-17721	+	TSC_hg19_v1_chr22_+_44420185 NM_013327 BC017461 AK309987 AK313957 BC046103 AB048276 AF151814 AF237769 AL159142	-19705	+	AF303887 NM_001003828	-44814	+	BC039811 NM_001243385	25092	+	NM_001137605 AK309348 AK293360	128952	+	NM_022141 AK225929 AK307294 BC034406 AF237772	136908	+	AK308443|PARVB|29780|parvin, beta##NM_001243386|PARVB|29780|parvin, beta##NM_013327|PARVB|29780|parvin, beta##BC017461|PARVB|29780|parvin, beta##AK309987|PARVB|29780|parvin, beta##AK313957|PARVB|29780|parvin, beta##BC046103|PARVB|29780|parvin, beta##AB048276|PARVB|29780|parvin, beta##AF151814|PARVB|29780|parvin, beta##AF237769|PARVB|29780|parvin, beta##AL159142|PARVB|29780|parvin, beta##AF303887|PARVB|29780|parvin, beta##NM_001003828|PARVB|29780|parvin, beta##BC039811|PARVB|29780|parvin, beta##NM_001243385|PARVB|29780|parvin, beta##NM_001137605|PARVG|64098|parvin, gamma##AK309348|PARVG|64098|parvin, gamma##AK293360|PARVG|64098|parvin, gamma##NM_022141|PARVG|64098|parvin, gamma##AK225929|PARVG|64098|parvin, gamma##AK307294|PARVG|64098|parvin, gamma##BC034406|PARVG|64098|parvin, gamma##AF237772|PARVG|64098|parvin, gamma	0.0	
chr2	27524409	27524504	reg1042479.p1	3.569	+	AK300699 NM_032546 NM_187841 AK311516	-19158	+	AK097736 NM_173650 AK311597 BC035194 AK302239	-26142	+	CU688460 DQ892115 DQ895310 U76010 TSC_hg19_v1_chr2_-_27485916 AK313600 BC028358 NM_003459	-38570	-	BC104470 BC104471 NM_003353	6665	-	TSC_hg19_v1_chr2_-_27545948 AF088036 AK311549 X76538 NM_002437	21486	-	TSC_hg19_v1_chr2_-_27579344 BX647092	54875	-	AK300699|TRIM54|57159|tripartite motif containing 54##NM_032546|TRIM54|57159|tripartite motif containing 54##NM_187841|TRIM54|57159|tripartite motif containing 54##AK097736|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##NM_173650|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##BC035194|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##AK302239|DNAJC5G|285126|DnaJ (Hsp40) homolog, subfamily C, member 5 gamma##DQ892115|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##DQ895310|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##U76010|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##AK313600|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##BC028358|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##NM_003459|SLC30A3|7781|solute carrier family 30 (zinc transporter), member 3##BC104470|UCN|7349|urocortin##BC104471|UCN|7349|urocortin##NM_003353|UCN|7349|urocortin##AF088036|MPV17|4358|MpV17 mitochondrial inner membrane protein##X76538|MPV17|4358|MpV17 mitochondrial inner membrane protein##NM_002437|MPV17|4358|MpV17 mitochondrial inner membrane protein##BX647092|GTF3C2|2976|general transcription factor IIIC, polypeptide 2, beta 110kDa	0.965364	CTCF.p2:11:0.965
chr2	9795875	9795943	reg1033147.p2	3.569	+	TSC_hg19_v1_chr2_-_9771102 NM_006826 X56468 BC056867 AK297624 BC001197 AK302208 BC093019 AK309462	-24784	-	TSC_hg19_v1_chr2_-_9771100 X57347 AK316158	-24860	-	AF070556 TSC_hg19_v1_chr2_-_9770668 BT020014 CU691168 AM393330 AM393338 AM393358 AM393674 AB464331 BC050601	-25296	-	NM_005680 BC018137 TSC_hg19_v1_chr2_+_9983599 AK309751 AK308070 AK315098 AK295402 AK026521 AB527836 DQ894659	187711	+	NM_198182 TSC_hg19_v1_chr2_+_10091799 AK293855 AK296982 AK312950 BC063299 BC098456 AF198489 BC067519 BC067520 BC067521	295941	+	TSC_hg19_v1_chr2_+_10183698 BC063286 NM_003597 AK315345 AF272830 AK289816 BC069383 BC074922 AF028008 AJ275989 AK316439 NM_001177716	387883	+	NM_006826|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X56468|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC056867|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK297624|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC001197|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK302208|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC093019|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK309462|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##X57347|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AK316158|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AF070556|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BT020014|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393330|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393338|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393358|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##AM393674|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##BC050601|YWHAQ|10971|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide##NM_005680|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##BC018137|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK309751|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK308070|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK315098|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK295402|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##AK026521|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##DQ894659|TAF1B|9014|TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa##NM_198182|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK293855|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK296982|GRHL1|29841|grainyhead-like 1 (Drosophila)##AK312950|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063299|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC098456|GRHL1|29841|grainyhead-like 1 (Drosophila)##AF198489|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067519|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067520|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC067521|GRHL1|29841|grainyhead-like 1 (Drosophila)##BC063286|KLF11|8462|Kruppel-like factor 11##NM_003597|KLF11|8462|Kruppel-like factor 11##AK315345|KLF11|8462|Kruppel-like factor 11##AF272830|KLF11|8462|Kruppel-like factor 11##AK289816|KLF11|8462|Kruppel-like factor 11##BC069383|KLF11|8462|Kruppel-like factor 11##BC074922|KLF11|8462|Kruppel-like factor 11##AF028008|KLF11|8462|Kruppel-like factor 11##AJ275989|KLF11|8462|Kruppel-like factor 11##AK316439|KLF11|8462|Kruppel-like factor 11##NM_001177716|KLF11|8462|Kruppel-like factor 11	0.0	
chr3	16412849	16412987	reg1037467.p1	3.569	+	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-106210	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	-106529	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-196724	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	142100	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	142306	-	BX648638 AK303026 NM_001190811	233352	-	NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like	0.0	
chr4	168143475	168143543	reg1033935.p2	3.569	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-1349055	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-1843352	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-1894654	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	12102	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	12195	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	12231	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.0	
chr8	29387513	29387646	reg1028411.p2	3.569	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-179509	-	AL137704 NM_057158	-181258	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-266965	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	552895	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	552993	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	565364	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.0	
chr12	41761932	41762042	reg1036217.p1	3.568	+	TSC_hg19_v1_chr12_+_41582170 NM_001164595	-179779	+	TSC_hg19_v1_chr12_+_41086262 DQ442054 AK289698 Z21488 NM_001843 NM_175038	-675705	+	TSC_hg19_v1_chr12_+_40618798 NM_198578 BC117180 AY792511	-1143128	+	AK294431 AK131554 NM_013377 AK091096 AX746777 BC093744 BC093746	69600	+	TSC_hg19_v1_chr12_-_42538503 AK125141 NM_001099650 NM_173601 BC030023	776592	-	CU691510 EU446625 EU446756 AB527838 TSC_hg19_v1_chr12_-_42632024 BC037777 AK127531 AK291355 AK296191 AK294260 NM_001190977	870048	-	NM_001164595|PDZRN4|29951|PDZ domain containing ring finger 4##AK289698|CNTN1|1272|contactin 1##Z21488|CNTN1|1272|contactin 1##NM_001843|CNTN1|1272|contactin 1##NM_175038|CNTN1|1272|contactin 1##NM_198578|LRRK2|120892|leucine-rich repeat kinase 2##BC117180|LRRK2|120892|leucine-rich repeat kinase 2##AY792511|LRRK2|120892|leucine-rich repeat kinase 2##AK294431|PDZRN4|29951|PDZ domain containing ring finger 4##AK131554|PDZRN4|29951|PDZ domain containing ring finger 4##NM_013377|PDZRN4|29951|PDZ domain containing ring finger 4##AK091096|PDZRN4|29951|PDZ domain containing ring finger 4##BC093744|PDZRN4|29951|PDZ domain containing ring finger 4##BC093746|PDZRN4|29951|PDZ domain containing ring finger 4##AK125141|GXYLT1|283464|glucoside xylosyltransferase 1##NM_001099650|GXYLT1|283464|glucoside xylosyltransferase 1##NM_173601|GXYLT1|283464|glucoside xylosyltransferase 1##BC030023|GXYLT1|283464|glucoside xylosyltransferase 1##EU446625|YAF2|10138|YY1 associated factor 2##EU446756|YAF2|10138|YY1 associated factor 2##BC037777|YAF2|10138|YY1 associated factor 2##AK127531|YAF2|10138|YY1 associated factor 2##AK291355|YAF2|10138|YY1 associated factor 2##AK296191|YAF2|10138|YY1 associated factor 2##AK294260|YAF2|10138|YY1 associated factor 2##NM_001190977|YAF2|10138|YY1 associated factor 2	0.127088	
chr14	74238559	74238650	reg1039935.p1	3.568	+	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	-11639	-	BC015668 TSC_hg19_v1_chr14_-_74226640	-11966	-	CR457112 BC039577 AK290980 TSC_hg19_v1_chr14_-_74181085 AF320308 BC007712 NM_006029	-57843	-	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	15315	-	TSC_hg19_v1_chr14_+_74318554 NM_001146154 NM_001146155 AY346133 AY424308 AK311280 NM_152444 BX641118 BC059364 AK309188 AK096410 BC034973	79985	+	NM_001242924 NM_001242926 NM_001242927 NM_001242928 NM_021188 AK299138	114714	+	AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##BC015668|C14orf43|91748|chromosome 14 open reading frame 43##CR457112|PNMA1|9240|paraneoplastic antigen MA1##BC039577|PNMA1|9240|paraneoplastic antigen MA1##AK290980|PNMA1|9240|paraneoplastic antigen MA1##AF320308|PNMA1|9240|paraneoplastic antigen MA1##BC007712|PNMA1|9240|paraneoplastic antigen MA1##NM_006029|PNMA1|9240|paraneoplastic antigen MA1##NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43##NM_001146154|PTGR2|145482|prostaglandin reductase 2##NM_001146155|PTGR2|145482|prostaglandin reductase 2##AY346133|PTGR2|145482|prostaglandin reductase 2##AY424308|PTGR2|145482|prostaglandin reductase 2##AK311280|PTGR2|145482|prostaglandin reductase 2##NM_152444|PTGR2|145482|prostaglandin reductase 2##BX641118|PTGR2|145482|prostaglandin reductase 2##BC059364|PTGR2|145482|prostaglandin reductase 2##AK309188|PTGR2|145482|prostaglandin reductase 2##AK096410|PTGR2|145482|prostaglandin reductase 2##NM_001242924|ZNF410|57862|zinc finger protein 410##NM_001242926|ZNF410|57862|zinc finger protein 410##NM_001242927|ZNF410|57862|zinc finger protein 410##NM_001242928|ZNF410|57862|zinc finger protein 410##NM_021188|ZNF410|57862|zinc finger protein 410##AK299138|ZNF410|57862|zinc finger protein 410	0.0	
chr15	77267162	77267269	reg1038421.p1	3.568	+	TSC_hg19_v1_chr15_+_77224095 NM_002902 AK313833 X78669 BC004892 BT009790 CU678788	-43143	+	AB040887 TSC_hg19_v1_chr15_-_77197781 AK056095	-69444	-	TSC_hg19_v1_chr15_-_77197682 BC070197 BC107415 AK056515	-69551	-	TSC_hg19_v1_chr15_+_77287465 AK309856 NM_003978 AK310126 BC008602	20275	+	AK304052 U94778 AK316220 TSC_hg19_v1_chr15_+_77287720 AK298733	20491	+	TSC_hg19_v1_chr15_+_77287743 AK310072 AB451310 AB451440 AF038602 AF038603 DQ891779 DQ894963 AB528365	20612	+	NM_002902|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##AK313833|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##X78669|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##BC004892|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##BT009790|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##AB040887|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056095|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC070197|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC107415|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056515|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310072|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451310|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451440|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038603|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ891779|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ894963|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	0.428369	CTCF.p2:8:0.428
chr16	58848417	58848597	reg1006250.p2	3.568	+	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-80310	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-129851	-	TSC_hg19_v1_chr16_-_58663742 BC040523 AL833549 NM_016284 NM_206999	-184762	-	AK124734 NM_001796	3222231	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	6307395	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	6307461	-	DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.0	
chr16	67062545	67062726	reg1029662.p1	3.568	+	NM_001190201 NM_001190202 TSC_hg19_v1_chr16_+_67034441 AK094783 AK300792 AK295483 BC041823 BC064573	-28087	+	AK293061 NM_173815 AK296064	-40106	+	AK025389 NM_001185176	-61258	+	TSC_hg19_v1_chr16_+_67063051 BC018509 NM_001755 NM_022845	412	+	TSC_hg19_v1_chr16_+_67063217 AK290462 AK291834 AB463544 AF294326 BT006862 CU676254 DQ890558 DQ893719 L20298 AK311724	653	+	TSC_hg19_v1_chr16_+_67143864 AF176088 BC004556 NM_025187	81219	+	NM_001190201|CES4A|283848|carboxylesterase 4A##NM_001190202|CES4A|283848|carboxylesterase 4A##AK094783|CES4A|283848|carboxylesterase 4A##AK300792|CES4A|283848|carboxylesterase 4A##AK295483|CES4A|283848|carboxylesterase 4A##BC041823|CES4A|283848|carboxylesterase 4A##BC064573|CES4A|283848|carboxylesterase 4A##AK293061|CES4A|283848|carboxylesterase 4A##NM_173815|CES4A|283848|carboxylesterase 4A##AK296064|CES4A|283848|carboxylesterase 4A##AK025389|CES3|23491|carboxylesterase 3##NM_001185176|CES3|23491|carboxylesterase 3##BC018509|CBFB|865|core-binding factor, beta subunit##NM_001755|CBFB|865|core-binding factor, beta subunit##NM_022845|CBFB|865|core-binding factor, beta subunit##AK290462|CBFB|865|core-binding factor, beta subunit##AK291834|CBFB|865|core-binding factor, beta subunit##AF294326|CBFB|865|core-binding factor, beta subunit##BT006862|CBFB|865|core-binding factor, beta subunit##DQ890558|CBFB|865|core-binding factor, beta subunit##DQ893719|CBFB|865|core-binding factor, beta subunit##L20298|CBFB|865|core-binding factor, beta subunit##AK311724|CBFB|865|core-binding factor, beta subunit##AF176088|C16orf70|80262|chromosome 16 open reading frame 70##BC004556|C16orf70|80262|chromosome 16 open reading frame 70##NM_025187|C16orf70|80262|chromosome 16 open reading frame 70	0.0	
chr17	7738045	7738131	reg1011225.p1	3.568	+	NM_020877 AB385476 AB463017	-115043	+	AK314841 TSC_hg19_v1_chr17_+_7608520 BC042944 NM_001406 U57001 AK027329	-129609	+	AY766323 DQ431240 NM_001143992 NM_018081 AK001247 AK225273 AK225411 AK303246 BC002336	-146353	+	TSC_hg19_v1_chr17_+_7741696 BC067879	3585	+	AB002344 NM_001080424	5145	+	TSC_hg19_v1_chr17_+_7758383 AK000032 BC057812 NM_203411	20294	+	NM_020877|DNAH2|146754|dynein, axonemal, heavy chain 2##AK314841|EFNB3|1949|ephrin-B3##BC042944|EFNB3|1949|ephrin-B3##NM_001406|EFNB3|1949|ephrin-B3##U57001|EFNB3|1949|ephrin-B3##AK027329|EFNB3|1949|ephrin-B3##AY766323|WRAP53|55135|WD repeat containing, antisense to TP53##DQ431240|WRAP53|55135|WD repeat containing, antisense to TP53##NM_001143992|WRAP53|55135|WD repeat containing, antisense to TP53##NM_018081|WRAP53|55135|WD repeat containing, antisense to TP53##AK001247|WRAP53|55135|WD repeat containing, antisense to TP53##AK225273|WRAP53|55135|WD repeat containing, antisense to TP53##AK225411|WRAP53|55135|WD repeat containing, antisense to TP53##AK303246|WRAP53|55135|WD repeat containing, antisense to TP53##BC002336|WRAP53|55135|WD repeat containing, antisense to TP53##AB002344|KDM6B|23135|lysine (K)-specific demethylase 6B##NM_001080424|KDM6B|23135|lysine (K)-specific demethylase 6B##AK000032|TMEM88|92162|transmembrane protein 88##BC057812|TMEM88|92162|transmembrane protein 88##NM_203411|TMEM88|92162|transmembrane protein 88	0.0	
chr18	47155670	47155786	reg1040542.p1	3.568	+	AK315252 TSC_hg19_v1_chr18_+_47088426 AF118767 AK291799 NM_006033 AK300333 BC060825 AY358928	-67300	+	TSC_hg19_v1_chr18_+_47087059 AK125344	-68666	+	TSC_hg19_v1_chr18_-_47018852 AK304659 AK311828 BC066323 BC017831 BC066324 NM_000985 NM_001035006 NM_001199340 NM_001199345 NM_001199356	-136840	-	CU674934 DQ893376 DQ896697 AB529169 BC001918 TSC_hg19_v1_chr18_-_47339904 AK225457 D16294	184186	-	TSC_hg19_v1_chr18_-_47340253 AK054673 NM_006111 AK314462	184542	-	TSC_hg19_v1_chr18_+_47340396 AK123464	184663	+	AK315252|LIPG|9388|lipase, endothelial##AF118767|LIPG|9388|lipase, endothelial##AK291799|LIPG|9388|lipase, endothelial##NM_006033|LIPG|9388|lipase, endothelial##AK300333|LIPG|9388|lipase, endothelial##BC060825|LIPG|9388|lipase, endothelial##AY358928|LIPG|9388|lipase, endothelial##AK125344|LIPG|9388|lipase, endothelial##AK304659|RPL17|6139|ribosomal protein L17##AK311828|RPL17|6139|ribosomal protein L17##BC066323|RPL17|6139|ribosomal protein L17##BC017831|RPL17|6139|ribosomal protein L17##BC066324|RPL17|6139|ribosomal protein L17##NM_000985|RPL17|6139|ribosomal protein L17##NM_001035006|RPL17|6139|ribosomal protein L17##NM_001199340|RPL17|6139|ribosomal protein L17##NM_001199345|RPL17|6139|ribosomal protein L17##NM_001199356|RPL17-C18ORF32|100526842|RPL17-C18orf32 readthrough##DQ893376|ACAA2|10449|acetyl-CoA acyltransferase 2##DQ896697|ACAA2|10449|acetyl-CoA acyltransferase 2##BC001918|ACAA2|10449|acetyl-CoA acyltransferase 2##AK225457|ACAA2|10449|acetyl-CoA acyltransferase 2##D16294|ACAA2|10449|acetyl-CoA acyltransferase 2##AK054673|ACAA2|10449|acetyl-CoA acyltransferase 2##NM_006111|ACAA2|10449|acetyl-CoA acyltransferase 2##AK314462|ACAA2|10449|acetyl-CoA acyltransferase 2	0.988711	CTCF.p2:23:0.989
chr20	14929205	14929301	reg1042412.p1	3.568	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-610997	-	TSC_hg19_v1_chr20_+_13976263 BC101216 BC101217 BC101218 BC101219 BC126936 BC128036 EF159161	-952917	+	AK131348 TSC_hg19_v1_chr20_+_13976161 NM_080676	-953147	+	BC018687 NM_001033087	248250	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	1624760	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	1781410	+	AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC101216|MACROD2|140733|MACRO domain containing 2##BC101217|MACROD2|140733|MACRO domain containing 2##BC101218|MACROD2|140733|MACRO domain containing 2##BC101219|MACROD2|140733|MACRO domain containing 2##BC126936|MACROD2|140733|MACRO domain containing 2##BC128036|MACROD2|140733|MACRO domain containing 2##EF159161|MACROD2|140733|MACRO domain containing 2##AK131348|MACROD2|140733|MACRO domain containing 2##NM_080676|MACROD2|140733|MACRO domain containing 2##BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B	0.0	
chr20	24514221	24514326	reg1037349.p1	3.568	+	TSC_hg19_v1_chr20_+_24450295 BC030637	-63971	+	AK024282 NM_024893	-64439	+	BC040904 NM_178311	-544858	-	TSC_hg19_v1_chr20_+_24929865 NM_003650	415590	+	TSC_hg19_v1_chr20_+_24929907 AF031824 BC015507 AB015225 CU677327 BT009825 AF036342 CR541860 CR541878	415749	+	TSC_hg19_v1_chr20_-_24973355 CU678464 BC003501	459057	-	BC030637|SYNDIG1|79953|synapse differentiation inducing 1##AK024282|SYNDIG1|79953|synapse differentiation inducing 1##NM_024893|SYNDIG1|79953|synapse differentiation inducing 1##BC040904|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_178311|GGTLC1|92086|gamma-glutamyltransferase light chain 1##NM_003650|CST7|8530|cystatin F (leukocystatin)##AF031824|CST7|8530|cystatin F (leukocystatin)##BC015507|CST7|8530|cystatin F (leukocystatin)##AB015225|CST7|8530|cystatin F (leukocystatin)##BT009825|CST7|8530|cystatin F (leukocystatin)##AF036342|CST7|8530|cystatin F (leukocystatin)##CR541860|CST7|8530|cystatin F (leukocystatin)##CR541878|CST7|8530|cystatin F (leukocystatin)##BC003501|C20orf3|57136|chromosome 20 open reading frame 3	0.23574	CTCF.p2:-6:0.236
chr3	156807632	156807812	reg1029106.p4	3.568	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-263611	+	BC034397 NM_001184718	-413270	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-414307	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	70187	-	NM_020307 AK122738	70792	-	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	346928	+	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long	0.0	
chr4	76623507	76623585	reg1025110.p1	3.568	+	TSC_hg19_v1_chr4_-_76598625 NM_203504 NM_203505	-24894	-	TSC_hg19_v1_chr4_-_76598595 BC011731 AK291772	-24967	-	AF053535 AF145284 TSC_hg19_v1_chr4_-_76598560	-24986	-	TSC_hg19_v1_chr4_-_76649558 AK311578	26129	-	TSC_hg19_v1_chr4_+_76649761 BC016672 AL832010 BC006398	26218	+	TSC_hg19_v1_chr4_+_76649814 AK314289	26269	+	NM_203504|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##NM_203505|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC011731|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AK291772|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF053535|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##AF145284|G3BP2|9908|GTPase activating protein (SH3 domain) binding protein 2##BC016672|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AL832010|USO1|8615|USO1 vesicle docking protein homolog (yeast)##BC006398|USO1|8615|USO1 vesicle docking protein homolog (yeast)##AK314289|USO1|8615|USO1 vesicle docking protein homolog (yeast)	0.777848	CTCF.p2:57:0.778
chr5	106701262	106701441	reg1038157.p1	3.568	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-3802870	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4106894	+	BC024591 NM_015216 AB463068	-4236077	+	AK308672 NM_001962 U26403	305239	-	TSC_hg19_v1_chr5_-_107717106 AK126722	1015779	-	BC063316 NM_001163315	1016447	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.0	
chr6	117853186	117853279	reg1039299.p2	3.568	+	TSC_hg19_v1_chr6_+_117803805 BC035671 NM_173674 AK095973	-49395	+	M34353 NM_002944 TSC_hg19_v1_chr6_-_117747031	-106201	-	AY056583 NM_153453 TSC_hg19_v1_chr6_+_117586720 AJ578053 NM_182645 BC100798 BC100799 BC118545 BC118622 BC069316 AK096878	-266421	+	CU679397 TSC_hg19_v1_chr6_-_117923611 AF287894	70299	-	TSC_hg19_v1_chr6_-_117923643 BC009553 AY033606 AB209385	70401	-	TSC_hg19_v1_chr6_-_117923675 AK314486	70441	-	BC035671|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##NM_173674|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AK095973|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##AY056583|VGLL2|245806|vestigial like 2 (Drosophila)##NM_153453|VGLL2|245806|vestigial like 2 (Drosophila)##AJ578053|VGLL2|245806|vestigial like 2 (Drosophila)##NM_182645|VGLL2|245806|vestigial like 2 (Drosophila)##BC100798|VGLL2|245806|vestigial like 2 (Drosophila)##BC100799|VGLL2|245806|vestigial like 2 (Drosophila)##BC118545|VGLL2|245806|vestigial like 2 (Drosophila)##BC118622|VGLL2|245806|vestigial like 2 (Drosophila)##BC069316|VGLL2|245806|vestigial like 2 (Drosophila)##AK096878|VGLL2|245806|vestigial like 2 (Drosophila)##AF287894|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##BC009553|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AY033606|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AB209385|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AK314486|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing	0.044033	
chr7	151168928	151169060	reg1039479.p1	3.568	+	BC100878 BC100879 BC100880 BC100881 AF445455 NM_144727	-31899	-	TSC_hg19_v1_chr7_-_151107122 NM_198285	-61873	-	AK056624 TSC_hg19_v1_chr7_-_151071775	-97258	-	AB528681 AF493921 BT006958 CU688134 D78132 Z29677 TSC_hg19_v1_chr7_-_151216661	47635	-	TSC_hg19_v1_chr7_-_151216740 AK289370 AF148645	47724	-	TSC_hg19_v1_chr7_-_151216769 BC066307	47775	-	BC100878|CRYGN|155051|crystallin, gamma N##BC100879|CRYGN|155051|crystallin, gamma N##BC100880|CRYGN|155051|crystallin, gamma N##BC100881|CRYGN|155051|crystallin, gamma N##AF445455|CRYGN|155051|crystallin, gamma N##NM_144727|CRYGN|155051|crystallin, gamma N##NM_198285|WDR86|349136|WD repeat domain 86##AF493921|RHEB|6009|Ras homolog enriched in brain##BT006958|RHEB|6009|Ras homolog enriched in brain##D78132|RHEB|6009|Ras homolog enriched in brain##Z29677|RHEB|6009|Ras homolog enriched in brain##AK289370|RHEB|6009|Ras homolog enriched in brain##AF148645|RHEB|6009|Ras homolog enriched in brain##BC066307|RHEB|6009|Ras homolog enriched in brain	0.0	
chr10	14037096	14037195	reg1027761.p2	3.567	+	TSC_hg19_v1_chr10_-_13749648 AK057828	-287456	-	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-408158	+	NM_003675 TSC_hg19_v1_chr10_+_13628948	-408202	+	TSC_hg19_v1_chr10_-_14050453 AK001072	13347	-	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	335705	-	TSC_hg19_v1_chr10_-_14646259 BC064407	609172	-	AK057828|FRMD4A|55691|FERM domain containing 4A##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK001072|FRMD4A|55691|FERM domain containing 4A##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B	0.034924	
chr1	108007539	108007677	reg1040185.p1	3.567	+	AB023193 TSC_hg19_v1_chr1_+_107683657	-324004	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-324866	+	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	-408243	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	223516	-	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	499992	-	AJ619961 NM_213651 AK292567	727788	-	AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.044536	
chr1	207103842	207104022	reg1043592.p2	3.567	+	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	-8645	-	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	-33132	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	-64757	+	BC110494 BC110495 CR749533 TSC_hg19_v1_chr1_-_207119812 AK309273 S62403 AF272149 X73079 AK225471 NM_002644	15829	-	AK298394 NM_001122979 NM_001170631 NM_032029	40024	-	BC000765 AK093826 AX748327 AY352640 NM_001083924 NM_023938	102116	-	BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##BC110494|PIGR|5284|polymeric immunoglobulin receptor##BC110495|PIGR|5284|polymeric immunoglobulin receptor##CR749533|PIGR|5284|polymeric immunoglobulin receptor##S62403|PIGR|5284|polymeric immunoglobulin receptor##AF272149|PIGR|5284|polymeric immunoglobulin receptor##X73079|PIGR|5284|polymeric immunoglobulin receptor##AK225471|PIGR|5284|polymeric immunoglobulin receptor##NM_002644|PIGR|5284|polymeric immunoglobulin receptor##AK298394|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001122979|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_001170631|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##NM_032029|FCAMR|83953|Fc receptor, IgA, IgM, high affinity##BC000765|C1orf116|79098|chromosome 1 open reading frame 116##AK093826|C1orf116|79098|chromosome 1 open reading frame 116##AY352640|C1orf116|79098|chromosome 1 open reading frame 116##NM_001083924|C1orf116|79098|chromosome 1 open reading frame 116##NM_023938|C1orf116|79098|chromosome 1 open reading frame 116	0.011202	
chr12	49951711	49951807	reg1037735.p2	3.567	+	TSC_hg19_v1_chr12_+_49932842 AB033108 NM_012284 BC144254 BC150602 AB022696 AB384589	-18739	+	TSC_hg19_v1_chr12_+_49761253 BC017767 AL833614 BC048299 AK292334 AK023202 BX648916 BC032441	-190365	+	TSC_hg19_v1_chr12_+_49760679 AK095582 NM_023071	-191070	+	AY336730 NM_001012300	8462	-	TSC_hg19_v1_chr12_-_49961916 AK123187 BC011794 NM_006337 BX538079 AK308581	10159	-	AM393365 AL136748 BC035621 AK302702 AK093242 AX748009 NM_032130	47586	-	AB033108|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##NM_012284|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC144254|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC150602|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##AB022696|KCNH3|23416|potassium voltage-gated channel, subfamily H (eag-related), member 3##BC017767|SPATS2|65244|spermatogenesis associated, serine-rich 2##AL833614|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC048299|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK292334|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK023202|SPATS2|65244|spermatogenesis associated, serine-rich 2##BX648916|SPATS2|65244|spermatogenesis associated, serine-rich 2##BC032441|SPATS2|65244|spermatogenesis associated, serine-rich 2##AK095582|SPATS2|65244|spermatogenesis associated, serine-rich 2##NM_023071|SPATS2|65244|spermatogenesis associated, serine-rich 2##AY336730|MCRS1|10445|microspherule protein 1##NM_001012300|MCRS1|10445|microspherule protein 1##BC011794|MCRS1|10445|microspherule protein 1##NM_006337|MCRS1|10445|microspherule protein 1##BX538079|MCRS1|10445|microspherule protein 1##AM393365|FAM186B|84070|family with sequence similarity 186, member B##AL136748|FAM186B|84070|family with sequence similarity 186, member B##BC035621|FAM186B|84070|family with sequence similarity 186, member B##AK302702|FAM186B|84070|family with sequence similarity 186, member B##AK093242|FAM186B|84070|family with sequence similarity 186, member B##NM_032130|FAM186B|84070|family with sequence similarity 186, member B	1.028213	CTCF.p2:20:0.995
chr12	53587511	53587586	reg1039212.p2	3.567	+	TSC_hg19_v1_chr12_-_53575136 AK296885	-12417	-	AK289659 BC052249 NM_001244705	-12857	-	TSC_hg19_v1_chr12_+_53574527 BC053557 NM_001004304	-12996	+	M68892 NM_000889 S80335 TSC_hg19_v1_chr12_-_53601036 AK298239 AK301523 AK311703	13474	-	TSC_hg19_v1_chr12_-_53601066 AK300960	13524	-	HQ692829 TSC_hg19_v1_chr12_-_53613945 AK316259 M32074 AK297801	26414	-	AK296885|CSAD|51380|cysteine sulfinic acid decarboxylase##AK289659|CSAD|51380|cysteine sulfinic acid decarboxylase##BC052249|CSAD|51380|cysteine sulfinic acid decarboxylase##NM_001244705|CSAD|51380|cysteine sulfinic acid decarboxylase##BC053557|ZNF740|283337|zinc finger protein 740##NM_001004304|ZNF740|283337|zinc finger protein 740##M68892|ITGB7|3695|integrin, beta 7##NM_000889|ITGB7|3695|integrin, beta 7##S80335|ITGB7|3695|integrin, beta 7##AK298239|ITGB7|3695|integrin, beta 7##AK301523|ITGB7|3695|integrin, beta 7##AK311703|ITGB7|3695|integrin, beta 7##AK300960|ITGB7|3695|integrin, beta 7##HQ692829|RARG|5916|retinoic acid receptor, gamma##AK316259|RARG|5916|retinoic acid receptor, gamma##M32074|RARG|5916|retinoic acid receptor, gamma##AK297801|RARG|5916|retinoic acid receptor, gamma	0.0	
chr14	54421741	54421828	reg1041927.p2	3.567	+	NM_130851	-515	-	TSC_hg19_v1_chr14_-_53620035 NM_001160147 NM_001160148 NM_030637	-801734	-	TSC_hg19_v1_chr14_-_53619974 DQ315474 GU376468 BC030703	-801816	-	TSC_hg19_v1_chr14_-_54423561 BC020546 M22490 BX161438 NM_001202 NM_130850	1749	-	AK098653 NM_001130851 NM_005192 TSC_hg19_v1_chr14_+_54863687 BC064965 L25876 L27711 BC103633 AK293265 EF560750 U02681	441937	+	TSC_hg19_v1_chr14_-_54908095 BX248284 AY358635 AK074781 AK307074 AK311897 AF070654 AF104398 NM_005776 BC103741	486332	-	NM_130851|BMP4|652|bone morphogenetic protein 4##NM_001160147|DDHD1|80821|DDHD domain containing 1##NM_001160148|DDHD1|80821|DDHD domain containing 1##NM_030637|DDHD1|80821|DDHD domain containing 1##DQ315474|DDHD1|80821|DDHD domain containing 1##GU376468|DDHD1|80821|DDHD domain containing 1##BC030703|DDHD1|80821|DDHD domain containing 1##BC020546|BMP4|652|bone morphogenetic protein 4##M22490|BMP4|652|bone morphogenetic protein 4##BX161438|BMP4|652|bone morphogenetic protein 4##NM_001202|BMP4|652|bone morphogenetic protein 4##NM_130850|BMP4|652|bone morphogenetic protein 4##AK098653|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_001130851|CDKN3|1033|cyclin-dependent kinase inhibitor 3##NM_005192|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC064965|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L25876|CDKN3|1033|cyclin-dependent kinase inhibitor 3##L27711|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BC103633|CDKN3|1033|cyclin-dependent kinase inhibitor 3##AK293265|CDKN3|1033|cyclin-dependent kinase inhibitor 3##EF560750|CDKN3|1033|cyclin-dependent kinase inhibitor 3##U02681|CDKN3|1033|cyclin-dependent kinase inhibitor 3##BX248284|CNIH|10175|cornichon homolog (Drosophila)##AY358635|CNIH|10175|cornichon homolog (Drosophila)##AK074781|CNIH|10175|cornichon homolog (Drosophila)##AK307074|CNIH|10175|cornichon homolog (Drosophila)##AK311897|CNIH|10175|cornichon homolog (Drosophila)##AF070654|CNIH|10175|cornichon homolog (Drosophila)##AF104398|CNIH|10175|cornichon homolog (Drosophila)##NM_005776|CNIH|10175|cornichon homolog (Drosophila)##BC103741|CNIH|10175|cornichon homolog (Drosophila)	0.0	
chr16	20912015	20912108	reg1035890.p1	3.567	+	BX648998 NM_173475 TSC_hg19_v1_chr16_-_20911681 BC040442 BX648185	-411	-	AK308690 NM_020424	-505	+	TSC_hg19_v1_chr16_+_20818060 AK314458 BC068503	-94017	+	AK311415 NM_001128301 NM_001128302 TSC_hg19_v1_chr16_+_20912121 AK311881	60	+	TSC_hg19_v1_chr16_+_20912407 BC017039	347	+	NM_020422 TSC_hg19_v1_chr16_+_21169994 AK074667 AK293557 BC015812	257921	+	BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##AK308690|LYRM1|57149|LYR motif containing 1##NM_020424|LYRM1|57149|LYR motif containing 1##AK314458|LOC81691|81691|exonuclease NEF-sp##BC068503|LOC81691|81691|exonuclease NEF-sp##AK311415|LYRM1|57149|LYR motif containing 1##NM_001128301|LYRM1|57149|LYR motif containing 1##NM_001128302|LYRM1|57149|LYR motif containing 1##AK311881|LYRM1|57149|LYR motif containing 1##BC017039|LYRM1|57149|LYR motif containing 1##NM_020422|TMEM159|57146|transmembrane protein 159##AK074667|TMEM159|57146|transmembrane protein 159##AK293557|TMEM159|57146|transmembrane protein 159##BC015812|TMEM159|57146|transmembrane protein 159	0.0	
chr16	73231176	73231244	reg1005282.p2	3.567	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-138624	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-148989	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-239505	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	1099483	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	1099561	+	TSC_hg19_v1_chr16_-_74401811 AK124154	1170602	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.0	
chr17	5114244	5114350	reg1034117.p2	3.567	+	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-18917	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-19124	-	AY143550 NM_004505 X63546 X63547	-82611	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	23804	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	71369	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	208628	-	AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##AY143550|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##NM_004505|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63546|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63547|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa	0.0	
chr19	14801112	14801280	reg1040364.p2	3.567	+	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	-432	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	-15519	-	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	-107282	+	BC082991 AF114491 AK301458 AK222891 AK298700 TSC_hg19_v1_chr19_-_14887654	86442	-	TSC_hg19_v1_chr19_-_14887656 AK291776	86516	-	BC053933 BC127004 BC127005 BC034949 NM_013447 NM_152916 NM_152917 NM_152918 NM_152919 NM_152920 NM_152921	88153	-	AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##BC082991|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AF114491|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK301458|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK222891|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK298700|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK291776|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##BC053933|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##BC127004|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##BC127005|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##BC034949|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_013447|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152916|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152917|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152918|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152919|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152920|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##NM_152921|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2	0.0	
chr2	208087819	208087987	reg1035898.p1	3.567	+	BC012919 TSC_hg19_v1_chr2_-_208031680	-56278	-	AB015132 NM_003709 TSC_hg19_v1_chr2_-_208030685 AK314439	-57247	-	BC112076 BC112078 NM_173077 AJ422118	-283603	+	NM_004379 NM_134442 TSC_hg19_v1_chr2_+_208394671 BC095407	306740	+	TSC_hg19_v1_chr2_+_208394709 X55545 M27691	306818	+	TSC_hg19_v1_chr2_+_208394772 BC010636 AK298740	306878	+	BC012919|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AB015132|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##NM_003709|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##AK314439|KLF7|8609|Kruppel-like factor 7 (ubiquitous)##BC112076|CPO|130749|carboxypeptidase O##BC112078|CPO|130749|carboxypeptidase O##NM_173077|CPO|130749|carboxypeptidase O##AJ422118|CPO|130749|carboxypeptidase O##NM_004379|CREB1|1385|cAMP responsive element binding protein 1##NM_134442|CREB1|1385|cAMP responsive element binding protein 1##BC095407|CREB1|1385|cAMP responsive element binding protein 1##X55545|CREB1|1385|cAMP responsive element binding protein 1##M27691|CREB1|1385|cAMP responsive element binding protein 1##BC010636|CREB1|1385|cAMP responsive element binding protein 1##AK298740|CREB1|1385|cAMP responsive element binding protein 1	0.038486	
chr4	87861091	87861177	reg1029138.p2	3.567	+	TSC_hg19_v1_chr4_+_87857481 L13743	-3651	+	TSC_hg19_v1_chr4_+_87856199 AK296149 NM_001166693 AK300364 BC017432 AK302199	-4919	+	BC016746 BC063410 NM_144645	-47574	-	TSC_hg19_v1_chr4_+_87928422 L13773 BC114930 NM_005935 AK296243 L25050 AB385236	67187	+	TSC_hg19_v1_chr4_+_87968211 AF177238 AF177239	107117	+	BC041901 TSC_hg19_v1_chr4_-_88141661 BX640727 BX538173 NM_020803 CR749265 BX640744 BX647454 BC041384	280528	-	AK296149|AFF1|4299|AF4/FMR2 family, member 1##NM_001166693|AFF1|4299|AF4/FMR2 family, member 1##AK300364|AFF1|4299|AF4/FMR2 family, member 1##BC017432|AFF1|4299|AF4/FMR2 family, member 1##BC016746|C4orf36|132989|chromosome 4 open reading frame 36##BC063410|C4orf36|132989|chromosome 4 open reading frame 36##NM_144645|C4orf36|132989|chromosome 4 open reading frame 36##L13773|AFF1|4299|AF4/FMR2 family, member 1##BC114930|AFF1|4299|AF4/FMR2 family, member 1##NM_005935|AFF1|4299|AF4/FMR2 family, member 1##AK296243|AFF1|4299|AF4/FMR2 family, member 1##L25050|AFF1|4299|AF4/FMR2 family, member 1##AF177238|AFF1|4299|AF4/FMR2 family, member 1##AF177239|AFF1|4299|AF4/FMR2 family, member 1##BC041901|KLHL8|57563|kelch-like 8 (Drosophila)##BX640727|KLHL8|57563|kelch-like 8 (Drosophila)##BX538173|KLHL8|57563|kelch-like 8 (Drosophila)##NM_020803|KLHL8|57563|kelch-like 8 (Drosophila)##CR749265|KLHL8|57563|kelch-like 8 (Drosophila)##BX640744|KLHL8|57563|kelch-like 8 (Drosophila)##BX647454|KLHL8|57563|kelch-like 8 (Drosophila)##BC041384|KLHL8|57563|kelch-like 8 (Drosophila)	0.0	
chr6	157197593	157197699	reg1044446.p1	3.567	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-97771	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-98362	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-98421	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	546938	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	547571	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	604893	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	0.877614	CTCF.p2:-28:0.878
chr9	6605369	6605507	reg1037273.p2	3.567	+	TSC_hg19_v1_chr9_+_6413338 AF274049 AB071698 EU176286 EU176602 AB385208	-192033	+	TSC_hg19_v1_chr9_+_6413200 AK308433	-192241	+	TSC_hg19_v1_chr9_+_6413139 BC028397 NM_152896	-192294	+	BC111993 BC111995 M63635 D90239 M64590 AK314156 NM_000170	40189	-	AK310439 NM_001146696	115424	+	TSC_hg19_v1_chr9_+_6757640 BC060771 NM_001146694 NM_001146695 NM_015061 BC053678	152229	+	AF274049|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AB071698|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176286|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##EU176602|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##AK308433|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC028397|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##NM_152896|UHRF2|115426|ubiquitin-like with PHD and ring finger domains 2##BC111993|GLDC|2731|glycine dehydrogenase (decarboxylating)##BC111995|GLDC|2731|glycine dehydrogenase (decarboxylating)##M63635|GLDC|2731|glycine dehydrogenase (decarboxylating)##D90239|GLDC|2731|glycine dehydrogenase (decarboxylating)##M64590|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK314156|GLDC|2731|glycine dehydrogenase (decarboxylating)##NM_000170|GLDC|2731|glycine dehydrogenase (decarboxylating)##AK310439|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146696|KDM4C|23081|lysine (K)-specific demethylase 4C##BC060771|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146694|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_001146695|KDM4C|23081|lysine (K)-specific demethylase 4C##NM_015061|KDM4C|23081|lysine (K)-specific demethylase 4C##BC053678|KDM4C|23081|lysine (K)-specific demethylase 4C	0.0	
chr9	82560009	82560117	reg1032744.p1	3.567	+	TSC_hg19_v1_chr9_+_82187610 AB033087 AK302709 AK296342 AB463316	-372378	+	TSC_hg19_v1_chr9_+_82187539 BC036369 BC059405 AK057236	-372539	+	TSC_hg19_v1_chr9_+_82186879 NM_007005	-373177	+	BC010100 NM_005077	1743532	-	TSC_hg19_v1_chr9_-_84304463 AB209854	1744364	-	NM_001145197 AK125847 AK308327	1983308	+	AB033087|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK302709|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK296342|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC036369|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC059405|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##AK057236|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##NM_007005|TLE4|7091|transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)##BC010100|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_005077|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##AB209854|TLE1|7088|transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)##NM_001145197|FAM75D4|389761|family with sequence similarity 75, member D4##AK125847|FAM75D4|389761|family with sequence similarity 75, member D4##AK308327|FAM75D4|389761|family with sequence similarity 75, member D4	0.225421	CTCF.p2:19:0.225
chr11	113458250	113458430	reg1021176.p2	3.566	+	S69899 BC021195 NM_000795 NM_016574 M30625	-112365	-	AJ541797 NM_178510 AF487542	-199781	+	NM_017868 AK023921 TSC_hg19_v1_chr11_+_113185315 AK292331 AK091887 BC011546 BC019086 BC032355	-273050	+	AK295366 BC047222 AK294313 BC028065 BC121802 BC121803 NM_030770 TSC_hg19_v1_chr11_-_113577091 AB028140	118718	-	TSC_hg19_v1_chr11_-_113644415 U54996 BC128264	186071	-	TSC_hg19_v1_chr11_-_113644447 AK300746 AK312925	186110	-	S69899|DRD2|1813|dopamine receptor D2##BC021195|DRD2|1813|dopamine receptor D2##NM_000795|DRD2|1813|dopamine receptor D2##NM_016574|DRD2|1813|dopamine receptor D2##M30625|DRD2|1813|dopamine receptor D2##AJ541797|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_178510|ANKK1|255239|ankyrin repeat and kinase domain containing 1##AF487542|ANKK1|255239|ankyrin repeat and kinase domain containing 1##NM_017868|TTC12|54970|tetratricopeptide repeat domain 12##AK023921|TTC12|54970|tetratricopeptide repeat domain 12##AK292331|TTC12|54970|tetratricopeptide repeat domain 12##AK091887|TTC12|54970|tetratricopeptide repeat domain 12##BC011546|TTC12|54970|tetratricopeptide repeat domain 12##BC019086|TTC12|54970|tetratricopeptide repeat domain 12##BC032355|TTC12|54970|tetratricopeptide repeat domain 12##AK295366|TMPRSS5|80975|transmembrane protease, serine 5##BC047222|TMPRSS5|80975|transmembrane protease, serine 5##AK294313|TMPRSS5|80975|transmembrane protease, serine 5##BC028065|TMPRSS5|80975|transmembrane protease, serine 5##BC121802|TMPRSS5|80975|transmembrane protease, serine 5##BC121803|TMPRSS5|80975|transmembrane protease, serine 5##NM_030770|TMPRSS5|80975|transmembrane protease, serine 5##AB028140|TMPRSS5|80975|transmembrane protease, serine 5##U54996|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##BC128264|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AK300746|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)##AK312925|ZW10|9183|ZW10, kinetochore associated, homolog (Drosophila)	0.0	
chr11	128342222	128342307	reg1035862.p2	3.566	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1468959	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1471539	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1471604	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	49699	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	49870	-	BX640634 NM_001143820	115188	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.0	
chr11	129565561	129565664	reg1015894.p1	3.566	+	AF031924 BC069378 NM_003658 BC111432 BC111572 AJ243512 AB527829	-319731	+	EF127492 NM_001142685	-503520	-	AB018255 AY194287 TSC_hg19_v1_chr11_-_128894084 AB079856 NM_014715	-671551	-	TSC_hg19_v1_chr11_+_129685744 AK098106 NM_138788 AK290283 AK292058	120132	+	NM_006165 X80878	197291	-	TSC_hg19_v1_chr11_-_129765453 BC063280	199830	-	AF031924|BARX2|8538|BARX homeobox 2##BC069378|BARX2|8538|BARX homeobox 2##NM_003658|BARX2|8538|BARX homeobox 2##BC111432|BARX2|8538|BARX homeobox 2##BC111572|BARX2|8538|BARX homeobox 2##AJ243512|BARX2|8538|BARX homeobox 2##EF127492|ARHGAP32|9743|Rho GTPase activating protein 32##NM_001142685|ARHGAP32|9743|Rho GTPase activating protein 32##AB018255|ARHGAP32|9743|Rho GTPase activating protein 32##AY194287|ARHGAP32|9743|Rho GTPase activating protein 32##AB079856|ARHGAP32|9743|Rho GTPase activating protein 32##NM_014715|ARHGAP32|9743|Rho GTPase activating protein 32##AK098106|TMEM45B|120224|transmembrane protein 45B##NM_138788|TMEM45B|120224|transmembrane protein 45B##AK290283|TMEM45B|120224|transmembrane protein 45B##AK292058|TMEM45B|120224|transmembrane protein 45B##NM_006165|NFRKB|4798|nuclear factor related to kappaB binding protein##X80878|NFRKB|4798|nuclear factor related to kappaB binding protein##BC063280|NFRKB|4798|nuclear factor related to kappaB binding protein	0.024646	
chr1	115259412	115259592	reg1036736.p2	3.566	+	TSC_hg19_v1_chr1_-_115259433 NM_002524	-29	-	BC005219 TSC_hg19_v1_chr1_-_115259387	-118	-	AB527106 AK291349 AK314252 BC056678 TSC_hg19_v1_chr1_-_115238168 BC022290 M60092 AK097077 NM_000036 NM_001172626	-21338	-	BC021692 TSC_hg19_v1_chr1_-_115268941	9413	-	TSC_hg19_v1_chr1_-_115269672 AK130392	10177	-	TSC_hg19_v1_chr1_-_115300582 AK022516 AK022528 AF077054	41069	-	NM_002524|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog##BC005219|NRAS|4893|neuroblastoma RAS viral (v-ras) oncogene homolog##AK291349|AMPD1|270|adenosine monophosphate deaminase 1##AK314252|AMPD1|270|adenosine monophosphate deaminase 1##BC056678|AMPD1|270|adenosine monophosphate deaminase 1##M60092|AMPD1|270|adenosine monophosphate deaminase 1##AK097077|AMPD1|270|adenosine monophosphate deaminase 1##NM_000036|AMPD1|270|adenosine monophosphate deaminase 1##NM_001172626|AMPD1|270|adenosine monophosphate deaminase 1##BC021692|CSDE1|7812|cold shock domain containing E1, RNA-binding##AK130392|CSDE1|7812|cold shock domain containing E1, RNA-binding##AK022516|CSDE1|7812|cold shock domain containing E1, RNA-binding##AK022528|CSDE1|7812|cold shock domain containing E1, RNA-binding##AF077054|CSDE1|7812|cold shock domain containing E1, RNA-binding	0.0	
chr12	121124446	121124617	reg1008392.p1	3.566	+	AF169148 AF169149 NM_004276 NM_031205	-36161	+	BC030201 NM_001033677	-46110	+	AK223206 TSC_hg19_v1_chr12_-_121019185 AK303144 AF070660 AF117232 AJ306296 BC012505 NM_015918 NM_198202	-105343	-	TSC_hg19_v1_chr12_+_121124951 NM_014730	407	+	TSC_hg19_v1_chr12_+_121124973 D63486 BC016297 BC000371	508	+	CR936818 TSC_hg19_v1_chr12_+_121132759	8187	+	AF169148|CABP1|9478|calcium binding protein 1##AF169149|CABP1|9478|calcium binding protein 1##NM_004276|CABP1|9478|calcium binding protein 1##NM_031205|CABP1|9478|calcium binding protein 1##BC030201|CABP1|9478|calcium binding protein 1##NM_001033677|CABP1|9478|calcium binding protein 1##AK223206|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AK303144|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF070660|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AF117232|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##AJ306296|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##BC012505|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_015918|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_198202|POP5|51367|processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)##NM_014730|MLEC|9761|malectin##D63486|MLEC|9761|malectin##BC016297|MLEC|9761|malectin##BC000371|MLEC|9761|malectin	0.0	
chr13	111868504	111868607	reg1004177.p1	3.566	+	AK300272 TSC_hg19_v1_chr13_+_111855425	-13133	+	NM_001113513 BC050521	-29369	+	TSC_hg19_v1_chr13_+_111806070 D63476	-62477	+	BC029889 NM_152324	104459	+	NM_005986	853357	+	AK130866 NM_145248 BC016750	1162104	+	AK300272|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##NM_001113513|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC050521|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##D63476|ARHGEF7|8874|Rho guanine nucleotide exchange factor (GEF) 7##BC029889|C13orf16|121793|chromosome 13 open reading frame 16##NM_152324|C13orf16|121793|chromosome 13 open reading frame 16##NM_005986|SOX1|6656|SRY (sex determining region Y)-box 1##AK130866|SPACA7|122258|sperm acrosome associated 7##NM_145248|SPACA7|122258|sperm acrosome associated 7##BC016750|SPACA7|122258|sperm acrosome associated 7	0.0	
chr17	30830530	30830653	reg1021746.p1	3.566	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-15831	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-15994	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-16520	+	CU688936 AB385376 AB018270 BC146763 NM_015194	373304	-	TSC_hg19_v1_chr17_-_31204141 AK127942	373532	-	TSC_hg19_v1_chr17_-_31204196 BC030602	373622	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.0	
chr18	13562604	13562742	reg1032898.p1	3.566	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-343888	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-571328	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-614609	+	NM_001003674 NM_001003675	48991	+	AF009426 AF009427 NM_004338 NM_181483	58193	+	TSC_hg19_v1_chr18_-_13726549 AK055618	163833	-	NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A	0.0	
chr19	11563421	11563487	reg1036916.p2	3.566	+	AB385574 AF144075 TSC_hg19_v1_chr19_+_11546995 BC013586	-16485	+	TSC_hg19_v1_chr19_+_11546486 AK290433	-16912	+	J03075 TSC_hg19_v1_chr19_+_11546469 Z36798 AK225390	-16986	+	BC080533 BC011875 TSC_hg19_v1_chr19_-_11564576	1118	-	TSC_hg19_v1_chr19_-_11565617 BC068222	2174	-	AY036909 L26405 D26158 BC014144 NM_001420 NM_032281 TSC_hg19_v1_chr19_-_11591862	28199	-	AF144075|PRKCSH|5589|protein kinase C substrate 80K-H##BC013586|PRKCSH|5589|protein kinase C substrate 80K-H##AK290433|PRKCSH|5589|protein kinase C substrate 80K-H##J03075|PRKCSH|5589|protein kinase C substrate 80K-H##Z36798|PRKCSH|5589|protein kinase C substrate 80K-H##AK225390|PRKCSH|5589|protein kinase C substrate 80K-H##BC080533|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC011875|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##AY036909|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##L26405|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##D26158|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##BC014144|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_001420|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)##NM_032281|ELAVL3|1995|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 3 (Hu antigen C)	0.33139	CTCF.p2:31:0.331
chr2	232261373	232261448	reg1037755.p2	3.566	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	-988	+	TSC_hg19_v1_chr2_+_232120778 AB055779	-140632	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-198016	+	AK001314 TSC_hg19_v1_chr2_-_232326464	65019	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	67725	-	BC002343 BC006494 BC006516 TSC_hg19_v1_chr2_-_232329226	67825	-	AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AY929062|ARMC9|80210|armadillo repeat containing 9##AK001314|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin##BC002343|NCL|4691|nucleolin##BC006494|NCL|4691|nucleolin##BC006516|NCL|4691|nucleolin	0.0	
chr2	96779264	96779358	reg1032249.p2	3.566	+	BC042847 AK302887 BC068596 BC064574 AK298131 AK302918 NM_207328	-78617	-	TSC_hg19_v1_chr2_+_96676311 BC015216	-102987	+	TSC_hg19_v1_chr2_-_96657677 AK302433	-121689	-	NM_000682 AB527942 BC133021 BC136537	2624	-	BC107126 AJ537600 BC107127 NM_001002036	24862	-	TSC_hg19_v1_chr2_-_96810943 EU832639 EU832716	31643	-	BC042847|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302887|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC068596|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##BC064574|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK298131|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302918|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##NM_207328|GPAT2|150763|glycerol-3-phosphate acyltransferase 2, mitochondrial##AK302433|ANKRD36C|400986|ankyrin repeat domain 36C##NM_000682|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC133021|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC136537|ADRA2B|151|adrenergic, alpha-2B-, receptor##BC107126|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##AJ537600|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##BC107127|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##NM_001002036|ASTL|431705|astacin-like metallo-endopeptidase (M12 family)##EU832639|DUSP2|1844|dual specificity phosphatase 2##EU832716|DUSP2|1844|dual specificity phosphatase 2	0.768416	CTCF.p2:-13:0.768
chr6	42204573	42204737	reg1044032.p2	3.566	+	TSC_hg19_v1_chr6_-_42185603 NM_018141	-19038	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-19055	-	TSC_hg19_v1_chr6_-_42185597 AK316599 BC012560	-19058	-	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	215168	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	327095	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	327122	+	NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##AK316599|MRPS10|55173|mitochondrial ribosomal protein S10##BC012560|MRPS10|55173|mitochondrial ribosomal protein S10##AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.0	
chr8	104511588	104511671	reg1037898.p2	3.566	+	TSC_hg19_v1_chr8_+_104427659 AK001874	-83964	+	TSC_hg19_v1_chr8_+_104427646 AK001693	-83983	+	AL117609 TSC_hg19_v1_chr8_+_104427613 BC026067 BC107790	-84010	+	AK126939 NM_001100117	1346	+	NM_014677 AK307790 AB018294 BC043144 AK308831 BC018057 AB384521 CU692140	319946	+	TSC_hg19_v1_chr8_+_105352053 AF277290 AF305068 AK095417 BC069349 NM_030788	840423	+	AK001874|DCAF13|25879|DDB1 and CUL4 associated factor 13##AK001693|DCAF13|25879|DDB1 and CUL4 associated factor 13##AL117609|DCAF13|25879|DDB1 and CUL4 associated factor 13##BC026067|DCAF13|25879|DDB1 and CUL4 associated factor 13##BC107790|DCAF13|25879|DDB1 and CUL4 associated factor 13##AK126939|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_001100117|RIMS2|9699|regulating synaptic membrane exocytosis 2##NM_014677|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK307790|RIMS2|9699|regulating synaptic membrane exocytosis 2##AB018294|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC043144|RIMS2|9699|regulating synaptic membrane exocytosis 2##AK308831|RIMS2|9699|regulating synaptic membrane exocytosis 2##BC018057|RIMS2|9699|regulating synaptic membrane exocytosis 2##AF277290|TM7SF4|81501|transmembrane 7 superfamily member 4##AF305068|TM7SF4|81501|transmembrane 7 superfamily member 4##AK095417|TM7SF4|81501|transmembrane 7 superfamily member 4##BC069349|TM7SF4|81501|transmembrane 7 superfamily member 4##NM_030788|TM7SF4|81501|transmembrane 7 superfamily member 4	0.012909	
chr8	137084883	137085044	reg1038526.p1	3.566	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-614762	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-615305	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1359689	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2424143	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2841281	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3630319	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.0	
chr9	112730012	112730179	reg1033397.p1	3.566	+	TSC_hg19_v1_chr9_+_112542500 AB023137 NM_007203 NM_053016 NM_147150 AJ303079 AJ312216 AJ312217 BC140818	-187480	+	BC039306 NM_001037293 AK095003	-327026	+	TSC_hg19_v1_chr9_-_112260588 BC063287 AK295875 AK304434 AK316066 NM_001145368 NM_002829	-469506	-	BC146863 BC171800 NM_001004065 NM_001198656 TSC_hg19_v1_chr9_+_112810942	80814	+	TSC_hg19_v1_chr9_+_112810975 AK057098 AK304311	80868	+	NM_001136562 AK300427	157697	+	AB023137|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_007203|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##NM_053016|PALM2|114299|paralemmin 2##NM_147150|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ303079|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##AJ312216|PALM2|114299|paralemmin 2##AJ312217|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC140818|PALM2-AKAP2|445815|PALM2-AKAP2 readthrough##BC039306|PALM2|114299|paralemmin 2##NM_001037293|PALM2|114299|paralemmin 2##AK095003|PALM2|114299|paralemmin 2##BC063287|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK295875|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK304434|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##AK316066|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_001145368|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##NM_002829|PTPN3|5774|protein tyrosine phosphatase, non-receptor type 3##BC146863|AKAP2|11217|A kinase (PRKA) anchor protein 2##BC171800|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001004065|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001198656|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK057098|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK304311|AKAP2|11217|A kinase (PRKA) anchor protein 2##NM_001136562|AKAP2|11217|A kinase (PRKA) anchor protein 2##AK300427|AKAP2|11217|A kinase (PRKA) anchor protein 2	0.0	
chr10	109774568	109774693	reg1030489.p1	3.565	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-850254	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-1315571	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-3373585	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	1908579	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	1908647	-	NM_019903 AB209810 BC057285	1991151	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.0	
chr11	10830388	10830455	reg1033481.p2	3.565	+	TSC_hg19_v1_chr11_-_10830388 BC018975	-47	-	TSC_hg19_v1_chr11_-_10830044 AK302886 AK310738	-365	-	TSC_hg19_v1_chr11_+_10829631 AK055888	-820	+	TSC_hg19_v1_chr11_-_10830474 AB209267 BC018746 AY513274 BC039851 U76111 U73824 BC043149 AK223548	56	-	NM_001042559 NM_001418 TSC_hg19_v1_chr11_-_10830664	205	-	TSC_hg19_v1_chr11_+_10830752 AK056207	376	+	BC018975|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK302886|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK310738|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK055888|LOC144017|144017|uncharacterized LOC144017##AB209267|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##BC018746|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AY513274|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##BC039851|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##U76111|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##U73824|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##BC043149|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##AK223548|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##NM_001042559|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2##NM_001418|EIF4G2|1982|eukaryotic translation initiation factor 4 gamma, 2	0.0	
chr12	102455607	102455716	reg1038075.p2	3.565	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	-184203	+	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	-184543	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	-231075	-	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	89	-	TSC_hg19_v1_chr12_-_102455791 BC010889	116	-	TSC_hg19_v1_chr12_-_102455912 AK314970 AK223339 AF151874 AF155655 NM_016053	200	-	AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##CR457171|CCDC53|51019|coiled-coil domain containing 53##BC010889|CCDC53|51019|coiled-coil domain containing 53##AK314970|CCDC53|51019|coiled-coil domain containing 53##AK223339|CCDC53|51019|coiled-coil domain containing 53##AF151874|CCDC53|51019|coiled-coil domain containing 53##AF155655|CCDC53|51019|coiled-coil domain containing 53##NM_016053|CCDC53|51019|coiled-coil domain containing 53	0.0	
chr12	111751562	111751636	reg1006959.p1	3.565	+	BC151245 NM_015267 AB006631 AF271236	-279727	+	M22815 X57542 X66141 BX538165 AK312013 BC031006 BC015821 BC031008 TSC_hg19_v1_chr12_-_111358384 NM_000432	-393221	-	AK302207 AK093162 AX747965 NM_152591 BC064580 BC044815	-466796	+	BC034809 AK056918 TSC_hg19_v1_chr12_-_111806865	55247	-	TSC_hg19_v1_chr12_-_111806900 BC014091 BC018996 AK299344 NM_001177996 NM_001177997 NM_144671	55311	-	TSC_hg19_v1_chr12_+_111843754 AF055581 NM_005475	92150	+	BC151245|CUX2|23316|cut-like homeobox 2##NM_015267|CUX2|23316|cut-like homeobox 2##AB006631|CUX2|23316|cut-like homeobox 2##AF271236|CUX2|23316|cut-like homeobox 2##M22815|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X57542|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##X66141|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BX538165|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK312013|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031006|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC015821|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##BC031008|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##NM_000432|MYL2|4633|myosin, light chain 2, regulatory, cardiac, slow##AK302207|CCDC63|160762|coiled-coil domain containing 63##AK093162|CCDC63|160762|coiled-coil domain containing 63##NM_152591|CCDC63|160762|coiled-coil domain containing 63##BC064580|CCDC63|160762|coiled-coil domain containing 63##BC044815|CCDC63|160762|coiled-coil domain containing 63##BC034809|FAM109A|144717|family with sequence similarity 109, member A##AK056918|FAM109A|144717|family with sequence similarity 109, member A##BC014091|FAM109A|144717|family with sequence similarity 109, member A##BC018996|FAM109A|144717|family with sequence similarity 109, member A##AK299344|FAM109A|144717|family with sequence similarity 109, member A##NM_001177996|FAM109A|144717|family with sequence similarity 109, member A##NM_001177997|FAM109A|144717|family with sequence similarity 109, member A##NM_144671|FAM109A|144717|family with sequence similarity 109, member A##AF055581|SH2B3|10019|SH2B adaptor protein 3##NM_005475|SH2B3|10019|SH2B adaptor protein 3	0.0	
chr14	38178765	38178838	reg1037046.p1	3.565	+	TSC_hg19_v1_chr14_-_38064444 NM_004496	-114337	-	TSC_hg19_v1_chr14_-_38064316 AK313785	-114485	-	AB463645 CU689794 AM392863 AM393239 AM393310 AM393369 TSC_hg19_v1_chr14_-_38064234 BC033890	-114595	-	TSC_hg19_v1_chr14_+_38677186 BX248780 NM_001049	498393	+	AK290868 TSC_hg19_v1_chr14_+_38678303 BC035618	499499	+	AB384936 DQ893328 DQ896644 TSC_hg19_v1_chr14_+_38678642	499818	+	NM_004496|FOXA1|3169|forkhead box A1##AK313785|FOXA1|3169|forkhead box A1##AM392863|FOXA1|3169|forkhead box A1##AM393239|FOXA1|3169|forkhead box A1##AM393310|FOXA1|3169|forkhead box A1##AM393369|FOXA1|3169|forkhead box A1##BC033890|FOXA1|3169|forkhead box A1##BX248780|SSTR1|6751|somatostatin receptor 1##NM_001049|SSTR1|6751|somatostatin receptor 1##AK290868|SSTR1|6751|somatostatin receptor 1##BC035618|SSTR1|6751|somatostatin receptor 1##DQ893328|SSTR1|6751|somatostatin receptor 1##DQ896644|SSTR1|6751|somatostatin receptor 1	0.877308	CTCF.p2:20:0.877
chr18	70774463	70774537	reg1043446.p1	3.565	+	AF448838 BC050329 NM_001201465 NM_138966	-239691	-	AF448839 NM_138999	-241567	-	NM_182511 TSC_hg19_v1_chr18_-_70211738	-562770	-	BC029579 NM_152676 TSC_hg19_v1_chr18_-_71815087 AK094215 NM_001142958	1040527	-	NM_014177 TSC_hg19_v1_chr18_+_71815757 AK289923 AK313936 BC000892 AF161503	1041294	+	CR456990 CU677229 DQ891283 DQ894343 M60174 TSC_hg19_v1_chr18_-_71959202 M22865 AK026310 BC015182 AB209617 NM_001190807 NM_001914 NM_148923	1184679	-	AF448838|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##BC050329|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_001201465|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138966|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##AF448839|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_138999|NETO1|81832|neuropilin (NRP) and tolloid (TLL)-like 1##NM_182511|CBLN2|147381|cerebellin 2 precursor##BC029579|FBXO15|201456|F-box protein 15##NM_152676|FBXO15|201456|F-box protein 15##AK094215|FBXO15|201456|F-box protein 15##NM_001142958|FBXO15|201456|F-box protein 15##NM_014177|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK289923|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AK313936|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##BC000892|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##AF161503|TIMM21|29090|translocase of inner mitochondrial membrane 21 homolog (yeast)##CR456990|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ891283|CYB5A|1528|cytochrome b5 type A (microsomal)##DQ894343|CYB5A|1528|cytochrome b5 type A (microsomal)##M60174|CYB5A|1528|cytochrome b5 type A (microsomal)##M22865|CYB5A|1528|cytochrome b5 type A (microsomal)##AK026310|CYB5A|1528|cytochrome b5 type A (microsomal)##BC015182|CYB5A|1528|cytochrome b5 type A (microsomal)##AB209617|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001190807|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_001914|CYB5A|1528|cytochrome b5 type A (microsomal)##NM_148923|CYB5A|1528|cytochrome b5 type A (microsomal)	0.0	
chr19	6736867	6737001	reg1005108.p2	3.565	+	TSC_hg19_v1_chr19_-_6720662 BC063852 BC150179 BC150200 K02765 AK304071 BC150299 NM_000064 AK299114	-16278	-	AF064090 NM_003807 NM_172014	-66336	-	TSC_hg19_v1_chr19_-_6670094 CR541854 CR541871 AB528780 AF036581 AY028261 AY358812 BC018058 AK292037	-66810	-	AL365404 TSC_hg19_v1_chr19_-_6737583	641	-	TSC_hg19_v1_chr19_-_6737592 AK291968	661	-	TSC_hg19_v1_chr19_-_6737615 BC146909 AX775899 NM_001080452	684	-	BC063852|C3|718|complement component 3##BC150179|C3|718|complement component 3##BC150200|C3|718|complement component 3##K02765|C3|718|complement component 3##AK304071|C3|718|complement component 3##BC150299|C3|718|complement component 3##NM_000064|C3|718|complement component 3##AF064090|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_003807|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##NM_172014|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541854|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##CR541871|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AF036581|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY028261|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AY358812|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##BC018058|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AK292037|TNFSF14|8740|tumor necrosis factor (ligand) superfamily, member 14##AL365404|GPR108|56927|G protein-coupled receptor 108##AK291968|GPR108|56927|G protein-coupled receptor 108##BC146909|GPR108|56927|G protein-coupled receptor 108##AX775899|GPR108|56927|G protein-coupled receptor 108##NM_001080452|GPR108|56927|G protein-coupled receptor 108	0.0	
chr20	16615416	16615522	reg1039648.p1	3.565	+	TSC_hg19_v1_chr20_-_16553995 AB385485 CU690726 AK307399 AB046810 BC150261 BX647572 AK095322 AY166853 BC050577 NM_001199865 NM_001199866 NM_024704	-61456	-	BC018687 NM_001033087	-1437966	+	AB040902 AF169677 TSC_hg19_v1_chr20_-_14318278 BC020870 AK027297 AK074883 NM_013281 NM_198391	-2297213	-	NM_003092 NM_198220 TSC_hg19_v1_chr20_+_16710679 BC018022 BC036737 AK313004 BC022311 BC008311 M15841	95194	+	BC101688 BC101690 AF233261 NM_020157 AY359082 AF243505 AJ242552	113552	+	BC040546 NM_001201528	591282	+	AK307399|KIF16B|55614|kinesin family member 16B##AB046810|KIF16B|55614|kinesin family member 16B##BC150261|KIF16B|55614|kinesin family member 16B##BX647572|KIF16B|55614|kinesin family member 16B##AK095322|KIF16B|55614|kinesin family member 16B##AY166853|KIF16B|55614|kinesin family member 16B##BC050577|KIF16B|55614|kinesin family member 16B##NM_001199865|KIF16B|55614|kinesin family member 16B##NM_001199866|KIF16B|55614|kinesin family member 16B##NM_024704|KIF16B|55614|kinesin family member 16B##BC018687|MACROD2|140733|MACRO domain containing 2##NM_001033087|MACROD2|140733|MACRO domain containing 2##AB040902|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AF169677|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##BC020870|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK027297|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##AK074883|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_013281|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_198391|FLRT3|23767|fibronectin leucine rich transmembrane protein 3##NM_003092|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##NM_198220|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC018022|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC036737|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##AK313004|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC022311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC008311|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##M15841|SNRPB2|6629|small nuclear ribonucleoprotein polypeptide B##BC101688|OTOR|56914|otoraplin##BC101690|OTOR|56914|otoraplin##AF233261|OTOR|56914|otoraplin##NM_020157|OTOR|56914|otoraplin##AY359082|OTOR|56914|otoraplin##AF243505|OTOR|56914|otoraplin##AJ242552|OTOR|56914|otoraplin##BC040546|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201528|PCSK2|5126|proprotein convertase subtilisin/kexin type 2	0.784725	CTCF.p2:11:0.785
chr20	5750969	5751149	reg1038972.p1	3.565	+	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	-19993	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	-159472	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-456023	-	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	141067	+	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	180064	-	AJ439063 NM_032485 NM_182802 AK297806 BC101054 BC101055 BC101056 BC101057 BC080656 AY158211 BC005170 AK314654	180424	+	AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AJ439063|MCM8|84515|minichromosome maintenance complex component 8##NM_032485|MCM8|84515|minichromosome maintenance complex component 8##NM_182802|MCM8|84515|minichromosome maintenance complex component 8##AK297806|MCM8|84515|minichromosome maintenance complex component 8##BC101054|MCM8|84515|minichromosome maintenance complex component 8##BC101055|MCM8|84515|minichromosome maintenance complex component 8##BC101056|MCM8|84515|minichromosome maintenance complex component 8##BC101057|MCM8|84515|minichromosome maintenance complex component 8##BC080656|MCM8|84515|minichromosome maintenance complex component 8##AY158211|MCM8|84515|minichromosome maintenance complex component 8##BC005170|MCM8|84515|minichromosome maintenance complex component 8##AK314654|MCM8|84515|minichromosome maintenance complex component 8	0.0	
chr20	61641111	61641292	reg1000073.p3	3.565	+	BC137288 BC137308 NM_080606	-2815	-	TSC_hg19_v1_chr20_+_61584095 AK095473 BC038593	-57076	+	NM_022082 TSC_hg19_v1_chr20_+_61584053 AK125597 BC025312 AK074107	-57171	+	TSC_hg19_v1_chr20_-_61847469 BC050284 NM_017798	206322	-	AY358835 AY358836 AF311388 NM_022161 NM_139317 BC014475 DQ893077 DQ896338 AF301009 AY517497	226140	+	TSC_hg19_v1_chr20_-_61884664 AK308958	243532	-	BC137288|BHLHE23|128408|basic helix-loop-helix family, member e23##BC137308|BHLHE23|128408|basic helix-loop-helix family, member e23##NM_080606|BHLHE23|128408|basic helix-loop-helix family, member e23##AK095473|SLC17A9|63910|solute carrier family 17, member 9##BC038593|SLC17A9|63910|solute carrier family 17, member 9##NM_022082|SLC17A9|63910|solute carrier family 17, member 9##AK125597|SLC17A9|63910|solute carrier family 17, member 9##BC025312|SLC17A9|63910|solute carrier family 17, member 9##AK074107|SLC17A9|63910|solute carrier family 17, member 9##BC050284|YTHDF1|54915|YTH domain family, member 1##NM_017798|YTHDF1|54915|YTH domain family, member 1##AY358835|BIRC7|79444|baculoviral IAP repeat containing 7##AY358836|BIRC7|79444|baculoviral IAP repeat containing 7##AF311388|BIRC7|79444|baculoviral IAP repeat containing 7##NM_022161|BIRC7|79444|baculoviral IAP repeat containing 7##NM_139317|BIRC7|79444|baculoviral IAP repeat containing 7##BC014475|BIRC7|79444|baculoviral IAP repeat containing 7##DQ893077|BIRC7|79444|baculoviral IAP repeat containing 7##DQ896338|BIRC7|79444|baculoviral IAP repeat containing 7##AF301009|BIRC7|79444|baculoviral IAP repeat containing 7##AY517497|BIRC7|79444|baculoviral IAP repeat containing 7##AK308958|NKAIN4|128414|Na+/K+ transporting ATPase interacting 4	0.0	
chr2	131462118	131462227	reg1042623.p2	3.565	+	CU686866 AF312769 BC074825 BC074826 BC069508 BC110080 BC146897 NM_032545 AK290094 AK315326 NM_001079530	-105118	-	NM_001079530 AK315326 AK290094 NM_032545 BC146897 BC110080 BC069508 BC074825 BC074826 AF312769	-183334	+	NM_001142370 NM_014369 TSC_hg19_v1_chr2_+_131113598 BC031076 BC024280 BC041562 BC052800 X79568 AK303804 CU690934	-348522	+	BC105013 BC105041 NM_207364 AY569570 AY280965	24511	+	AK289525 NM_152698 AK095696 AK291424 BC113445 BC113447 BC143806 NM_001105193	50943	+	TSC_hg19_v1_chr2_+_131513793 NM_001105194 NM_001105195	51650	+	AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_001142370|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##NM_014369|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC031076|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC024280|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC041562|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC052800|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##X79568|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##AK303804|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC105013|GPR148|344561|G protein-coupled receptor 148##BC105041|GPR148|344561|G protein-coupled receptor 148##NM_207364|GPR148|344561|G protein-coupled receptor 148##AY569570|GPR148|344561|G protein-coupled receptor 148##AY280965|GPR148|344561|G protein-coupled receptor 148##AK289525|FAM123C|205147|family with sequence similarity 123C##NM_152698|FAM123C|205147|family with sequence similarity 123C##AK095696|FAM123C|205147|family with sequence similarity 123C##AK291424|FAM123C|205147|family with sequence similarity 123C##BC113445|FAM123C|205147|family with sequence similarity 123C##BC113447|FAM123C|205147|family with sequence similarity 123C##BC143806|FAM123C|205147|family with sequence similarity 123C##NM_001105193|FAM123C|205147|family with sequence similarity 123C##NM_001105194|FAM123C|205147|family with sequence similarity 123C##NM_001105195|FAM123C|205147|family with sequence similarity 123C	0.788404	CTCF.p2:13:0.788
chr22	43361088	43361268	reg1043055.p2	3.565	+	AL136845 NM_001184971	-5292	-	BC008037 NM_007229	-18132	-	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-107823	-	TSC_hg19_v1_chr22_-_43411136 AF128536	49961	-	TSC_hg19_v1_chr22_-_43411156 NM_001184970	49999	-	TSC_hg19_v1_chr22_-_43485410 AF104927 AF173935 AK315658 BC009058 AK095996 BC014968 AL136687 NM_012263	124209	-	AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184970|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF104927|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AF173935|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK315658|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC009058|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AK095996|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##BC014968|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##AL136687|TTLL1|25809|tubulin tyrosine ligase-like family, member 1##NM_012263|TTLL1|25809|tubulin tyrosine ligase-like family, member 1	0.0	
chr2	97429526	97429632	reg1042901.p1	3.565	+	TSC_hg19_v1_chr2_+_97426638 BC063295 NM_020184 AF202777 AB046812	-2830	+	AK304515 AK075347 AK295463 AK299740 AK301077 AK308085 AK316331 AL136617 TSC_hg19_v1_chr2_-_97405802 AK312249 NM_001142292 NM_030805 AK310100	-23766	-	BC000347 BC005822 BC005862 AB528167 AJ549957 AM392707 EU831637 EU831721 TSC_hg19_v1_chr2_-_97405791 BC067265 AY358929 AK222828 BX648002	-23796	-	AK293915 TSC_hg19_v1_chr2_+_97454352	24758	+	TSC_hg19_v1_chr2_+_97482006 BC037272 AK126847 NM_017623 NM_199078 BC007199 AF216965 AK000025 CU675553	52903	+	AF492401 AY196212 BC107056 AK057011 AK092564 AX747600 NM_144994	80166	-	BC063295|CNNM4|26504|cyclin M4##NM_020184|CNNM4|26504|cyclin M4##AF202777|CNNM4|26504|cyclin M4##AB046812|CNNM4|26504|cyclin M4##AK304515|LMAN2L|81562|lectin, mannose-binding 2-like##AK075347|LMAN2L|81562|lectin, mannose-binding 2-like##AK295463|LMAN2L|81562|lectin, mannose-binding 2-like##AK299740|LMAN2L|81562|lectin, mannose-binding 2-like##AK301077|LMAN2L|81562|lectin, mannose-binding 2-like##AK308085|LMAN2L|81562|lectin, mannose-binding 2-like##AK316331|LMAN2L|81562|lectin, mannose-binding 2-like##AL136617|LMAN2L|81562|lectin, mannose-binding 2-like##AK312249|LMAN2L|81562|lectin, mannose-binding 2-like##NM_001142292|LMAN2L|81562|lectin, mannose-binding 2-like##NM_030805|LMAN2L|81562|lectin, mannose-binding 2-like##AK310100|LMAN2L|81562|lectin, mannose-binding 2-like##BC000347|LMAN2L|81562|lectin, mannose-binding 2-like##BC005822|LMAN2L|81562|lectin, mannose-binding 2-like##BC005862|LMAN2L|81562|lectin, mannose-binding 2-like##AJ549957|LMAN2L|81562|lectin, mannose-binding 2-like##AM392707|LMAN2L|81562|lectin, mannose-binding 2-like##EU831637|LMAN2L|81562|lectin, mannose-binding 2-like##EU831721|LMAN2L|81562|lectin, mannose-binding 2-like##BC067265|LMAN2L|81562|lectin, mannose-binding 2-like##AY358929|LMAN2L|81562|lectin, mannose-binding 2-like##AK222828|LMAN2L|81562|lectin, mannose-binding 2-like##BX648002|LMAN2L|81562|lectin, mannose-binding 2-like##AK293915|CNNM4|26504|cyclin M4##BC037272|CNNM3|26505|cyclin M3##AK126847|CNNM3|26505|cyclin M3##NM_017623|CNNM3|26505|cyclin M3##NM_199078|CNNM3|26505|cyclin M3##BC007199|CNNM3|26505|cyclin M3##AF216965|CNNM3|26505|cyclin M3##AK000025|CNNM3|26505|cyclin M3##AF492401|ANKRD23|200539|ankyrin repeat domain 23##AY196212|ANKRD23|200539|ankyrin repeat domain 23##BC107056|ANKRD23|200539|ankyrin repeat domain 23##AK057011|ANKRD23|200539|ankyrin repeat domain 23##AK092564|ANKRD23|200539|ankyrin repeat domain 23##NM_144994|ANKRD23|200539|ankyrin repeat domain 23	0.359021	CTCF.p2:15:0.359
chr8	108544599	108544722	reg1036864.p1	3.565	+	U83508 BC152411 BC152419 D13628 AY055342 NM_001146 NM_001199859 BX648814	-34472	-	AF503617 AB463396 AM393063 BC105103 BC105105 AL833422 AL832152 NM_139166 AK092694 AX747674	-762216	-	AK303695 NM_001198534 NM_001198535 AB075503 AK302844 AK316153 FN650109	-806305	+	TSC_hg19_v1_chr8_-_109095846 AK123023 NM_178565	551214	-	AB527268 CR457029 CR542275 CU674376 CU677689 CU678957 DQ892278 DQ895478 BC000734 TSC_hg19_v1_chr8_-_109260938 U54562 U85947	716274	-	TSC_hg19_v1_chr8_-_109260947 BC017887 AK313186 BC005944 BC016706 BC021679 U94175 U62962 BC008419 NM_001568 AK310902	716325	-	U83508|ANGPT1|284|angiopoietin 1##BC152411|ANGPT1|284|angiopoietin 1##BC152419|ANGPT1|284|angiopoietin 1##D13628|ANGPT1|284|angiopoietin 1##AY055342|ANGPT1|284|angiopoietin 1##NM_001146|ANGPT1|284|angiopoietin 1##NM_001199859|ANGPT1|284|angiopoietin 1##BX648814|ANGPT1|284|angiopoietin 1##AF503617|ABRA|137735|actin-binding Rho activating protein##AM393063|ABRA|137735|actin-binding Rho activating protein##BC105103|ABRA|137735|actin-binding Rho activating protein##BC105105|ABRA|137735|actin-binding Rho activating protein##AL833422|ABRA|137735|actin-binding Rho activating protein##AL832152|ABRA|137735|actin-binding Rho activating protein##NM_139166|ABRA|137735|actin-binding Rho activating protein##AK092694|ABRA|137735|actin-binding Rho activating protein##AK303695|OXR1|55074|oxidation resistance 1##NM_001198534|OXR1|55074|oxidation resistance 1##NM_001198535|OXR1|55074|oxidation resistance 1##AB075503|OXR1|55074|oxidation resistance 1##AK302844|OXR1|55074|oxidation resistance 1##AK316153|OXR1|55074|oxidation resistance 1##FN650109|OXR1|55074|oxidation resistance 1##AK123023|RSPO2|340419|R-spondin 2##NM_178565|RSPO2|340419|R-spondin 2##CR457029|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##CR542275|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ892278|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##DQ895478|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC000734|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U54562|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U85947|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC017887|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK313186|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC005944|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC016706|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC021679|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U94175|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##U62962|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##BC008419|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##NM_001568|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E##AK310902|EIF3E|3646|eukaryotic translation initiation factor 3, subunit E	0.910885	CTCF.p2:6:0.911
chr1	111173845	111174025	reg1002247.p2	3.564	+	AK290061 NM_004974 TSC_hg19_v1_chr1_-_111148981	-24953	-	NM_005549	-112139	-	AY358683 AF333024 NM_032414 AY029225 BC025399 DQ891570 DQ894763	-180144	+	BC043564 NM_001204269	160	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	43417	-	TSC_hg19_v1_chr1_-_111217553 AK314009	43609	-	AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_005549|KCNA10|3744|potassium voltage-gated channel, shaker-related subfamily, member 10##AY358683|PROK1|84432|prokineticin 1##AF333024|PROK1|84432|prokineticin 1##NM_032414|PROK1|84432|prokineticin 1##AY029225|PROK1|84432|prokineticin 1##BC025399|PROK1|84432|prokineticin 1##DQ891570|PROK1|84432|prokineticin 1##DQ894763|PROK1|84432|prokineticin 1##BC043564|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_001204269|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3	0.0	
chr14	69259652	69259741	reg1040728.p1	3.564	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-973176	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-976397	-	AK315462 NM_152443	-1091094	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	24	-	NM_001244698 NM_004926	934	-	NM_001244701 AB528867	3288	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr15	78376322	78376432	reg1024684.p1	3.564	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	-6424	-	TSC_hg19_v1_chr15_-_77924732 AK291363	-451597	-	AY358284 TSC_hg19_v1_chr15_-_77924705 AY324320 BC011057 NM_032808	-451678	-	NM_001101404	8549	+	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	47385	-	TSC_hg19_v1_chr15_+_78441718 AK299970 AK096721 AK296002 BC036227 NM_005530 AK315963 CR749548 BC021967 AK316051	65328	+	AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY358284|LINGO1|84894|leucine rich repeat and Ig domain containing 1##AY324320|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BC011057|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_032808|LINGO1|84894|leucine rich repeat and Ig domain containing 1##NM_001101404|SH2D7|646892|SH2 domain containing 7##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2##AK299970|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK296002|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC036227|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##NM_005530|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK315963|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##CR749548|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC021967|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK316051|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha	0.0	
chr16	89161616	89161797	reg1037746.p1	3.564	+	TSC_hg19_v1_chr16_+_89160285 BC028399 AK290963 BC064609 BC072391 AK075499	-1399	+	NM_001127214 NM_001243279 NM_174917 TSC_hg19_v1_chr16_+_89160259	-1469	+	TSC_hg19_v1_chr16_-_89119364 AK055272	-42337	-	TSC_hg19_v1_chr16_+_89213949 AK090408	52240	+	TSC_hg19_v1_chr16_+_89238171 D83542 NM_004933 AK308596 AK308631 BC008951 DQ893277 DQ896608	76493	+	NM_001242757	104822	-	BC028399|ACSF3|197322|acyl-CoA synthetase family member 3##AK290963|ACSF3|197322|acyl-CoA synthetase family member 3##BC064609|ACSF3|197322|acyl-CoA synthetase family member 3##BC072391|ACSF3|197322|acyl-CoA synthetase family member 3##AK075499|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001127214|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001243279|ACSF3|197322|acyl-CoA synthetase family member 3##NM_174917|ACSF3|197322|acyl-CoA synthetase family member 3##D83542|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##NM_004933|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##AK308631|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##BC008951|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##DQ893277|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##DQ896608|CDH15|1013|cadherin 15, type 1, M-cadherin (myotubule)##NM_001242757|SLC22A31|146429|solute carrier family 22, member 31	0.0	
chr17	42357132	42357312	reg1030939.p2	3.564	+	BC101574 BC101570 M27819 NM_000342 X12609 TSC_hg19_v1_chr17_-_42345504	-11753	-	BC050302 TSC_hg19_v1_chr17_+_42299409	-57877	+	AK292577 TSC_hg19_v1_chr17_-_42298971 AK292518	-58285	-	AL133657 NM_001144825 NM_001144826 NM_006695 TSC_hg19_v1_chr17_+_42385950 AB209802 AK226045 BC006194 AK313669 BX537443 AF055026 CR456748 CU675291 U93871	28768	+	TSC_hg19_v1_chr17_-_42402172 BC096819 BC009330 AK026060 AL133584 BC001398 AK289357 AK295478 AK301139	44944	-	TSC_hg19_v1_chr17_-_42402202 NM_001143780 NM_016016	44985	-	BC101574|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##BC101570|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##M27819|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##NM_000342|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##X12609|SLC4A1|6521|solute carrier family 4, anion exchanger, member 1 (erythrocyte membrane protein band 3, Diego blood group)##AK292577|UBTF|7343|upstream binding transcription factor, RNA polymerase I##AK292518|UBTF|7343|upstream binding transcription factor, RNA polymerase I##AL133657|RUNDC3A|10900|RUN domain containing 3A##NM_001144825|RUNDC3A|10900|RUN domain containing 3A##NM_001144826|RUNDC3A|10900|RUN domain containing 3A##NM_006695|RUNDC3A|10900|RUN domain containing 3A##AB209802|RUNDC3A|10900|RUN domain containing 3A##AK226045|RUNDC3A|10900|RUN domain containing 3A##BC006194|RUNDC3A|10900|RUN domain containing 3A##AK313669|RUNDC3A|10900|RUN domain containing 3A##BX537443|RUNDC3A|10900|RUN domain containing 3A##AF055026|RUNDC3A|10900|RUN domain containing 3A##CR456748|RUNDC3A|10900|RUN domain containing 3A##U93871|RUNDC3A|10900|RUN domain containing 3A##BC096819|SLC25A39|51629|solute carrier family 25, member 39##BC009330|SLC25A39|51629|solute carrier family 25, member 39##AK026060|SLC25A39|51629|solute carrier family 25, member 39##AL133584|SLC25A39|51629|solute carrier family 25, member 39##BC001398|SLC25A39|51629|solute carrier family 25, member 39##AK289357|SLC25A39|51629|solute carrier family 25, member 39##AK295478|SLC25A39|51629|solute carrier family 25, member 39##AK301139|SLC25A39|51629|solute carrier family 25, member 39##NM_001143780|SLC25A39|51629|solute carrier family 25, member 39##NM_016016|SLC25A39|51629|solute carrier family 25, member 39	0.0	
chr1	90598831	90598999	reg1018270.p2	3.564	+	TSC_hg19_v1_chr1_+_90460726 NM_182975 NM_182976 BC052645 BC061521 BC038454 BC090866 AK000410 BC053888 BC014899 BC070341 BC013102 AK303707 AK297073	-138199	+	BC009486 TSC_hg19_v1_chr1_+_90287584	-311351	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	-311457	+	BC126439 BC126441 AY338397 NM_020063	583870	-	BC050656 TSC_hg19_v1_chr1_-_91487020 AK024026 NM_016620	888123	-	TSC_hg19_v1_chr1_-_91487583 BC041138 AK291520	888648	-	NM_182975|ZNF326|284695|zinc finger protein 326##NM_182976|ZNF326|284695|zinc finger protein 326##BC052645|ZNF326|284695|zinc finger protein 326##BC061521|ZNF326|284695|zinc finger protein 326##BC038454|ZNF326|284695|zinc finger protein 326##BC090866|ZNF326|284695|zinc finger protein 326##AK000410|ZNF326|284695|zinc finger protein 326##BC053888|ZNF326|284695|zinc finger protein 326##BC014899|ZNF326|284695|zinc finger protein 326##BC070341|ZNF326|284695|zinc finger protein 326##BC013102|ZNF326|284695|zinc finger protein 326##AK303707|ZNF326|284695|zinc finger protein 326##AK297073|ZNF326|284695|zinc finger protein 326##BC009486|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC126439|BARHL2|343472|BarH-like homeobox 2##BC126441|BARHL2|343472|BarH-like homeobox 2##AY338397|BARHL2|343472|BarH-like homeobox 2##NM_020063|BARHL2|343472|BarH-like homeobox 2##BC050656|ZNF644|84146|zinc finger protein 644##AK024026|ZNF644|84146|zinc finger protein 644##NM_016620|ZNF644|84146|zinc finger protein 644##BC041138|ZNF644|84146|zinc finger protein 644##AK291520|ZNF644|84146|zinc finger protein 644	0.0	
chr2	189843126	189843248	reg1039912.p2	3.564	+	TSC_hg19_v1_chr2_+_189839133 AB384877 X07240	-4014	+	X14420 BX649097 TSC_hg19_v1_chr2_+_189839117	-4069	+	TSC_hg19_v1_chr2_+_189839098 AK308010 NM_000090 BC028178	-4093	+	AB384824 J04478 Y14690 AB209045 BC086874 AK297936 TSC_hg19_v1_chr2_-_190044488 AK300146 M31365 NM_000393	201280	-	BC040567 NM_032168 TSC_hg19_v1_chr2_+_190306177	462983	+	TSC_hg19_v1_chr2_+_190306204 AK022607 AK290445 CR749440 AK022581 AK091546 AX747050	463022	+	X07240|COL3A1|1281|collagen, type III, alpha 1##X14420|COL3A1|1281|collagen, type III, alpha 1##AK308010|COL3A1|1281|collagen, type III, alpha 1##NM_000090|COL3A1|1281|collagen, type III, alpha 1##BC028178|COL3A1|1281|collagen, type III, alpha 1##J04478|COL5A2|1290|collagen, type V, alpha 2##Y14690|COL5A2|1290|collagen, type V, alpha 2##AB209045|COL5A2|1290|collagen, type V, alpha 2##BC086874|COL5A2|1290|collagen, type V, alpha 2##AK297936|COL5A2|1290|collagen, type V, alpha 2##AK300146|COL5A2|1290|collagen, type V, alpha 2##M31365|COL5A2|1290|collagen, type V, alpha 2##NM_000393|COL5A2|1290|collagen, type V, alpha 2##BC040567|WDR75|84128|WD repeat domain 75##NM_032168|WDR75|84128|WD repeat domain 75##AK022607|WDR75|84128|WD repeat domain 75##AK290445|WDR75|84128|WD repeat domain 75##CR749440|WDR75|84128|WD repeat domain 75##AK022581|WDR75|84128|WD repeat domain 75##AK091546|WDR75|84128|WD repeat domain 75	0.265928	CTCF.p2:0:0.266
chr3	178684592	178684773	reg1010788.p2	3.564	+	AF209747 NM_005832	-408130	+	BC017825 NM_181361	-430459	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1769623	-	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	104883	-	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	104944	-	TSC_hg19_v1_chr3_+_178866144 NM_006218 AK292940	181556	+	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3##NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	0.0	
chr5	172957707	172957814	reg1040556.p1	3.564	+	AK095891 NM_003714	-201255	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	-202317	-	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	-202498	-	BC003114 TSC_hg19_v1_chr5_-_173043602	85837	-	TSC_hg19_v1_chr5_-_173043624 AK301982	85868	-	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	85913	-	AK095891|STC2|8614|stanniocalcin 2##NM_003714|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1	0.01707	
chr6	133833904	133833986	reg1010550.p2	3.564	+	BC030588 Y17114 TSC_hg19_v1_chr6_+_133562518 BC041063	-271413	+	AK295798 NM_004100 NM_172103 NM_172105 TSC_hg19_v1_chr6_+_133562494	-271454	+	TSC_hg19_v1_chr6_+_133135710 AK311826 BC095424 BC017321 BC071930	-698226	+	TSC_hg19_v1_chr6_+_134210250 NM_198392 NM_003206	376309	+	TSC_hg19_v1_chr6_+_134210277 AF035718 AF047419 BC025697	376325	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	439419	+	BC030588|EYA4|2070|eyes absent homolog 4 (Drosophila)##Y17114|EYA4|2070|eyes absent homolog 4 (Drosophila)##BC041063|EYA4|2070|eyes absent homolog 4 (Drosophila)##AK295798|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_004100|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172103|EYA4|2070|eyes absent homolog 4 (Drosophila)##NM_172105|EYA4|2070|eyes absent homolog 4 (Drosophila)##AK311826|RPS12|6206|ribosomal protein S12##BC095424|RPS12|6206|ribosomal protein S12##BC017321|RPS12|6206|ribosomal protein S12##BC071930|RPS12|6206|ribosomal protein S12##NM_198392|TCF21|6943|transcription factor 21##NM_003206|TCF21|6943|transcription factor 21##AF035718|TCF21|6943|transcription factor 21##AF047419|TCF21|6943|transcription factor 21##BC025697|TCF21|6943|transcription factor 21##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1	0.0	
chr6_cox_hap2	3247342	3247409	reg1020138.p2	3.564	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.994584	
chr8	88844456	88844580	reg1036025.p1	3.564	+	AK093121 AX747937 BC117326 BC117328 NM_173538	-965845	+	BC150601 AF272900 NM_019098 DQ426865	-1088606	-	AK292912 BC007017 BC008385 TSC_hg19_v1_chr8_+_87526694 BC066597 BC036242 AB014536 AF077226	-1317807	+	BC035011 AL833507 BC111778 AK093094 AX747918 NM_152418	41741	-	AK314274 NM_005941 TSC_hg19_v1_chr8_-_89339773 AL832595	495228	-	NM_003821 TSC_hg19_v1_chr8_+_90769995 AY358814 AK301448 AF027706 AF064824 AK075213 AY358813 BC004553	1925512	+	AK093121|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117326|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC117328|CNBD1|168975|cyclic nucleotide binding domain containing 1##NM_173538|CNBD1|168975|cyclic nucleotide binding domain containing 1##BC150601|CNGB3|54714|cyclic nucleotide gated channel beta 3##AF272900|CNGB3|54714|cyclic nucleotide gated channel beta 3##NM_019098|CNGB3|54714|cyclic nucleotide gated channel beta 3##AK292912|CPNE3|8895|copine III##BC007017|CPNE3|8895|copine III##BC008385|CPNE3|8895|copine III##BC066597|CPNE3|8895|copine III##BC036242|CPNE3|8895|copine III##AB014536|CPNE3|8895|copine III##AF077226|CPNE3|8895|copine III##BC035011|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AL833507|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##BC111778|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK093094|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##NM_152418|DCAF4L2|138009|DDB1 and CUL4 associated factor 4-like 2##AK314274|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_005941|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##AL832595|MMP16|4325|matrix metallopeptidase 16 (membrane-inserted)##NM_003821|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358814|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK301448|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF027706|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AF064824|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AK075213|RIPK2|8767|receptor-interacting serine-threonine kinase 2##AY358813|RIPK2|8767|receptor-interacting serine-threonine kinase 2##BC004553|RIPK2|8767|receptor-interacting serine-threonine kinase 2	0.012897	
chr9	12640145	12640244	reg1038254.p1	3.564	+	BC028038 NM_002839	-2027472	-	TSC_hg19_v1_chr9_+_8858136 AK094342	-3782061	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-3906275	-	NM_000550 X51420 BC052608	53231	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	134822	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	135587	+	BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##HQ257895|C9orf150|286343|chromosome 9 open reading frame 150	0.95055	CTCF.p2:22:0.951
chrX	1610772	1610888	reg1039094.p1	3.564	+	AK301844 NM_001173473	-38179	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-39029	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-99861	-	BC043610 GQ280263 NM_178129 AK126147	45208	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	99699	+	NM_004043 U11090	103517	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.07611	
chr10	11220738	11220897	reg1024911.p2	3.563	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-13325	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-13371	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-13392	+	NM_001080491	353456	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	432819	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	563581	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.0	
chr12	52444176	52444298	reg1025999.p1	3.563	+	AK297526 NM_001202233	-27622	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	-43496	+	AK299496 NM_020327	-97074	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	979	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	19517	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	19561	+	AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##AK299496|ACVR1B|91|activin A receptor, type IB##NM_020327|ACVR1B|91|activin A receptor, type IB##NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44	0.236097	CTCF.p2:-32:0.236
chr14	59642219	59642326	reg1029431.p1	3.563	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-537526	+	AK302579 NM_001244193 AK310356 AK302718	-735846	+	NM_014749 BC066647	-747541	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	13132	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	289650	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	289784	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.0	
chr15	33915416	33915520	reg1031183.p2	3.563	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	-312299	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-555233	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-904302	-	TSC_hg19_v1_chr15_-_34212524 BC037796	297090	-	AK095198 NM_012125	345620	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	415844	-	AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor	0.0	
chr15	52821382	52821466	reg1031237.p2	3.563	+	TSC_hg19_v1_chr15_-_52821078 AB290180 AK303660 AK307600 NM_000259 NM_001142495 U90942 Y07759	-168	-	AF272390 BC144611 BC064841 TSC_hg19_v1_chr15_-_52587968 AK301079 AK304136 NM_018728	-233490	-	AF161352 TSC_hg19_v1_chr15_-_52529707	-291718	-	AK123616 TSC_hg19_v1_chr15_-_52861045 AJ223091 CR457132 AK311751	39635	-	TSC_hg19_v1_chr15_-_52861228 AF084555 BC003418 NM_006628	39808	-	TSC_hg19_v1_chr15_-_52861344 BC100015 AL833077	39953	-	AB290180|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK303660|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AK307600|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_000259|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##NM_001142495|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##U90942|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##Y07759|MYO5A|4644|myosin VA (heavy chain 12, myoxin)##AF272390|MYO5C|55930|myosin VC##BC144611|MYO5C|55930|myosin VC##BC064841|MYO5C|55930|myosin VC##AK301079|MYO5C|55930|myosin VC##AK304136|MYO5C|55930|myosin VC##NM_018728|MYO5C|55930|myosin VC##AF161352|MYO5C|55930|myosin VC##AK123616|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AJ223091|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##CR457132|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK311751|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AF084555|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC003418|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##NM_006628|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC100015|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AL833077|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa	0.0	
chr18	4017621	4017724	reg1032050.p2	3.563	+	AK294777 AK294717 NM_001242762 NM_001242763	-142945	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	-143388	-	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	-172342	-	AK304101 TSC_hg19_v1_chr18_-_4455255	437581	-	AK316099 NM_001242761 NM_004746 TSC_hg19_v1_chr18_-_4455271	437598	-	TSC_hg19_v1_chr18_-_5197257 NM_001145194	1179580	-	AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK304101|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK316099|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242761|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_004746|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42	0.550502	CTCF.p2:0:0.551
chr22	36782528	36782706	reg1038388.p1	3.563	+	D11393 TSC_hg19_v1_chr22_-_36697021	-85603	-	BC011915 TSC_hg19_v1_chr22_-_36681760	-100854	-	TSC_hg19_v1_chr22_+_36649178 AF305224 AK303919 AK313752 AK298053 BC113867 BC114475 BC127186 BC143038 BC143039 BC017331 AK296099	-133428	+	TSC_hg19_v1_chr22_-_36783906 AB290175 CR456526	1269	-	TSC_hg19_v1_chr22_-_36783943 M81105	1335	-	AK131080 TSC_hg19_v1_chr22_-_36783982 BC049849	1362	-	D11393|MYH9|4627|myosin, heavy chain 9, non-muscle##BC011915|MYH9|4627|myosin, heavy chain 9, non-muscle##AF305224|APOL1|8542|apolipoprotein L, 1##AK303919|APOL1|8542|apolipoprotein L, 1##AK313752|APOL1|8542|apolipoprotein L, 1##AK298053|APOL1|8542|apolipoprotein L, 1##BC113867|APOL1|8542|apolipoprotein L, 1##BC114475|APOL1|8542|apolipoprotein L, 1##BC127186|APOL1|8542|apolipoprotein L, 1##BC143038|APOL1|8542|apolipoprotein L, 1##BC143039|APOL1|8542|apolipoprotein L, 1##BC017331|APOL1|8542|apolipoprotein L, 1##AK296099|APOL1|8542|apolipoprotein L, 1##AB290175|MYH9|4627|myosin, heavy chain 9, non-muscle##CR456526|MYH9|4627|myosin, heavy chain 9, non-muscle##M81105|MYH9|4627|myosin, heavy chain 9, non-muscle##AK131080|MYH9|4627|myosin, heavy chain 9, non-muscle##BC049849|MYH9|4627|myosin, heavy chain 9, non-muscle	0.0	
chr6	37484490	37484625	reg1034264.p2	3.563	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-16861	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-16905	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-81120	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	181149	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	302733	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	303133	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.0	
chr8	141519382	141519538	reg1038314.p2	3.563	+	AK128755 NM_031466	-50783	-	AK026394 TSC_hg19_v1_chr8_-_141467862 NM_001160372	-51602	-	AB067469 TSC_hg19_v1_chr8_-_141467841	-51635	-	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	1932	+	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	2103	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	126164	-	AK128755|TRAPPC9|83696|trafficking protein particle complex 9##NM_031466|TRAPPC9|83696|trafficking protein particle complex 9##AK026394|TRAPPC9|83696|trafficking protein particle complex 9##NM_001160372|TRAPPC9|83696|trafficking protein particle complex 9##AB067469|TRAPPC9|83696|trafficking protein particle complex 9##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2	0.0	
chr9	129959436	129959525	reg1036098.p1	3.563	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-74450	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-74518	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-74572	-	NM_032293 AK293732 AK095679	67327	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	199966	+	TSC_hg19_v1_chr9_-_130186602 AK124330	227086	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.0	
chrX	20075092	20075159	reg1037947.p2	3.563	+	AY092822 TSC_hg19_v1_chrX_-_20009180	-66017	-	NM_198279	-86744	-	TSC_hg19_v1_chrX_-_19905675 AK313308 AF230904 AY423734 NM_031892	-169421	-	AK294788 NM_001168467	59627	-	AK027409 TSC_hg19_v1_chrX_-_20135017 AK303019 AK316117 AK296319 BC136379 BC089400 NM_001168465 NM_001168466 NM_152780	59939	-	BT007064 EU831819 EU831896 TSC_hg19_v1_chrX_-_20159957 BC000793 BC110421 AK312320 BC067851 L18960 NM_001412	84751	-	AY092822|LOC729609|729609|uncharacterized LOC729609##NM_198279|CXorf23|256643|chromosome X open reading frame 23##AK313308|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF230904|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY423734|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_031892|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK294788|MAP7D2|256714|MAP7 domain containing 2##NM_001168467|MAP7D2|256714|MAP7 domain containing 2##AK027409|MAP7D2|256714|MAP7 domain containing 2##AK303019|MAP7D2|256714|MAP7 domain containing 2##AK316117|MAP7D2|256714|MAP7 domain containing 2##AK296319|MAP7D2|256714|MAP7 domain containing 2##BC136379|MAP7D2|256714|MAP7 domain containing 2##BC089400|MAP7D2|256714|MAP7 domain containing 2##NM_001168465|MAP7D2|256714|MAP7 domain containing 2##NM_001168466|MAP7D2|256714|MAP7 domain containing 2##NM_152780|MAP7D2|256714|MAP7 domain containing 2##BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	0.0	
chr12	67010397	67010543	reg1032626.p1	3.562	+	TSC_hg19_v1_chr12_+_66696305 NM_033647 BC143409 BC143411 AK290894 AK024464 AB527324 AF319995	-314141	+	BC069388 AK298645 TSC_hg19_v1_chr12_+_66583064 AB590803 CU691242	-427417	+	TSC_hg19_v1_chr12_+_66583004 AF113136	-427460	+	BC115393 BC115394 TSC_hg19_v1_chr12_-_67072757 AK307576	62286	-	TSC_hg19_v1_chr12_-_67072881 AK095519 NM_001178074 NM_021150	62432	-	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	652632	+	NM_033647|HELB|92797|helicase (DNA) B##BC143409|HELB|92797|helicase (DNA) B##BC143411|HELB|92797|helicase (DNA) B##AK290894|HELB|92797|helicase (DNA) B##AF319995|HELB|92797|helicase (DNA) B##BC069388|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AK298645|IRAK3|11213|interleukin-1 receptor-associated kinase 3##AF113136|IRAK3|11213|interleukin-1 receptor-associated kinase 3##BC115393|GRIP1|23426|glutamate receptor interacting protein 1##BC115394|GRIP1|23426|glutamate receptor interacting protein 1##AK307576|GRIP1|23426|glutamate receptor interacting protein 1##AK095519|GRIP1|23426|glutamate receptor interacting protein 1##NM_001178074|GRIP1|23426|glutamate receptor interacting protein 1##NM_021150|GRIP1|23426|glutamate receptor interacting protein 1##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1	0.0	
chr14	103021035	103021102	reg1041342.p1	3.562	+	TSC_hg19_v1_chr14_-_102976110 BX161460 NM_152326	-44954	-	AK291868 TSC_hg19_v1_chr14_-_102976070	-45035	-	TSC_hg19_v1_chr14_+_102829428 BC030791 AK296395 AK299690 BC142667 BC142715 AK127721	-191643	+	TSC_hg19_v1_chr14_+_103058991 NM_015156 BC051003 BC064495	37930	+	TSC_hg19_v1_chr14_+_103059100 AB464145 AF155595	38093	+	TSC_hg19_v1_chr14_+_103243821 NM_001199427 NM_003300 NM_145725 NM_145726 U21092	222751	+	BX161460|ANKRD9|122416|ankyrin repeat domain 9##NM_152326|ANKRD9|122416|ankyrin repeat domain 9##AK291868|ANKRD9|122416|ankyrin repeat domain 9##BC030791|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK296395|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK299690|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142667|TECPR2|9895|tectonin beta-propeller repeat containing 2##BC142715|TECPR2|9895|tectonin beta-propeller repeat containing 2##AK127721|TECPR2|9895|tectonin beta-propeller repeat containing 2##NM_015156|RCOR1|23186|REST corepressor 1##BC051003|RCOR1|23186|REST corepressor 1##BC064495|RCOR1|23186|REST corepressor 1##AF155595|RCOR1|23186|REST corepressor 1##NM_001199427|TRAF3|7187|TNF receptor-associated factor 3##NM_003300|TRAF3|7187|TNF receptor-associated factor 3##NM_145725|TRAF3|7187|TNF receptor-associated factor 3##NM_145726|TRAF3|7187|TNF receptor-associated factor 3##U21092|TRAF3|7187|TNF receptor-associated factor 3	0.0	
chr16	31359036	31359164	reg1040278.p1	3.562	+	TSC_hg19_v1_chr16_+_31271330 AK127637 AB384734	-87746	+	TSC_hg19_v1_chr16_+_31271311 J03925 BC096346 BC096347 BC096348 BC099660	-87783	+	TSC_hg19_v1_chr16_+_31271295 AK057856 NM_000632 NM_001145808 M18044	-87807	+	TSC_hg19_v1_chr16_+_31366508 AK296666 AK309642 NM_000887	7392	+	TSC_hg19_v1_chr16_+_31366521 M81695	7422	+	TSC_hg19_v1_chr16_+_31366549 BC037577 BC038237 DQ892486 DQ895697	7451	+	AK127637|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##J03925|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096346|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096347|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC096348|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##BC099660|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##AK057856|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##NM_000632|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##NM_001145808|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##M18044|ITGAM|3684|integrin, alpha M (complement component 3 receptor 3 subunit)##AK296666|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##AK309642|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##NM_000887|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##M81695|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##BC037577|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##BC038237|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ892486|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)##DQ895697|ITGAX|3687|integrin, alpha X (complement component 3 receptor 4 subunit)	0.631374	CTCF.p2:-61:0.631
chr17	19666129	19666208	reg1014796.p2	3.562	+	BC021194 BC008892 BC004370 AK314584 AK225513 M74542 AK093877 AX748347 AK225505 BC004102 NM_000691	-14503	-	NM_001135167	-17244	-	AK292193 NM_001135168	-17397	-	TSC_hg19_v1_chr17_-_19771250 BC034988 AB014523 NM_001142610 NM_014683 BC039310	104975	-	AB590263 CU677815 DQ270159 DQ891477 DQ894666 TSC_hg19_v1_chr17_-_19881134 AK312438 BC017055 AF037439 NM_007202	214894	-	TSC_hg19_v1_chr17_-_19881144 AK295180	214990	-	BC021194|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##BC008892|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##BC004370|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK314584|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK225513|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##M74542|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK093877|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK225505|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##BC004102|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##NM_000691|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##NM_001135167|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##AK292193|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##NM_001135168|ALDH3A1|218|aldehyde dehydrogenase 3 family, member A1##BC034988|ULK2|9706|unc-51-like kinase 2 (C. elegans)##AB014523|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_001142610|ULK2|9706|unc-51-like kinase 2 (C. elegans)##NM_014683|ULK2|9706|unc-51-like kinase 2 (C. elegans)##BC039310|ULK2|9706|unc-51-like kinase 2 (C. elegans)##DQ270159|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ891477|AKAP10|11216|A kinase (PRKA) anchor protein 10##DQ894666|AKAP10|11216|A kinase (PRKA) anchor protein 10##AK312438|AKAP10|11216|A kinase (PRKA) anchor protein 10##BC017055|AKAP10|11216|A kinase (PRKA) anchor protein 10##AF037439|AKAP10|11216|A kinase (PRKA) anchor protein 10##NM_007202|AKAP10|11216|A kinase (PRKA) anchor protein 10##AK295180|AKAP10|11216|A kinase (PRKA) anchor protein 10	0.012012	
chr18	39608328	39608441	reg1037713.p1	3.562	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-73151	+	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	-73185	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-2228116	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	1087185	-	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	1249045	-	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	2651730	+	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK090603|LOC647946|647946|uncharacterized LOC647946##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1	0.992568	CTCF.p2:5:0.993
chr1	9352663	9352735	reg1032540.p1	3.562	+	CR749282 TSC_hg19_v1_chr1_+_9299950	-52761	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	-57782	+	TSC_hg19_v1_chr1_+_9294832 BC081559	-57884	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	238	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	270	+	TSC_hg19_v1_chr1_+_9415945 CU677397	63247	+	CR749282|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1	0.0	
chr20	35710260	35710356	reg1038965.p2	3.562	+	TSC_hg19_v1_chr20_-_35580196 AK027811 NM_015474	-130093	-	AF228421 AK315169 TSC_hg19_v1_chr20_-_35580179	-130131	-	TSC_hg19_v1_chr20_-_35580112 AK304795 AL050267	-130195	-	AB384850 DQ890612 DQ893783 CU689312 TSC_hg19_v1_chr20_-_35724395 AK308096 BC032247 AK290380 L14812	14057	-	TSC_hg19_v1_chr20_-_35724401 AK310870 NM_002895 NM_183404	14099	-	TSC_hg19_v1_chr20_+_35807496 NM_001135771 NM_002951 Y00282	97166	+	AK027811|SAMHD1|25939|SAM domain and HD domain 1##NM_015474|SAMHD1|25939|SAM domain and HD domain 1##AF228421|SAMHD1|25939|SAM domain and HD domain 1##AK315169|SAMHD1|25939|SAM domain and HD domain 1##AK304795|SAMHD1|25939|SAM domain and HD domain 1##AL050267|SAMHD1|25939|SAM domain and HD domain 1##DQ890612|RBL1|5933|retinoblastoma-like 1 (p107)##DQ893783|RBL1|5933|retinoblastoma-like 1 (p107)##AK308096|RBL1|5933|retinoblastoma-like 1 (p107)##BC032247|RBL1|5933|retinoblastoma-like 1 (p107)##AK290380|RBL1|5933|retinoblastoma-like 1 (p107)##L14812|RBL1|5933|retinoblastoma-like 1 (p107)##AK310870|RBL1|5933|retinoblastoma-like 1 (p107)##NM_002895|RBL1|5933|retinoblastoma-like 1 (p107)##NM_183404|RBL1|5933|retinoblastoma-like 1 (p107)##NM_001135771|RPN2|6185|ribophorin II##NM_002951|RPN2|6185|ribophorin II##Y00282|RPN2|6185|ribophorin II	0.273053	CTCF.p2:-7:0.255
chr21	34697903	34697969	reg1044497.p2	3.562	+	AK222770 AK222812 AK312631 TSC_hg19_v1_chr21_+_34697277 BC021825 J03171 BC002590 AB528746 CU692410 DQ891323 DQ894507	-618	+	TSC_hg19_v1_chr21_+_34697236 NM_000629	-718	+	TSC_hg19_v1_chr21_+_34638753 AK299961 AB590138 DQ892552 DQ895763 BT009777	-59182	+	TSC_hg19_v1_chr21_+_34775192 NM_005534 U05875	77260	+	TSC_hg19_v1_chr21_+_34775735 BC003624 U05877	77796	+	AK314005 TSC_hg19_v1_chr21_+_34775746 AK292246	77812	+	AK222770|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK222812|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK312631|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC021825|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##J03171|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##BC002590|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ891323|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##DQ894507|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##NM_000629|IFNAR1|3454|interferon (alpha, beta and omega) receptor 1##AK299961|IL10RB|3588|interleukin 10 receptor, beta##DQ892552|IL10RB|3588|interleukin 10 receptor, beta##DQ895763|IL10RB|3588|interleukin 10 receptor, beta##BT009777|IL10RB|3588|interleukin 10 receptor, beta##NM_005534|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05875|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##BC003624|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05877|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK314005|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK292246|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)	0.0	
chr21	43484312	43484493	reg1040012.p2	3.562	+	AB051810 AB051811 NM_001199527 NM_001199528	-1335	+	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	-53931	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	-110319	-	AB096965 AY771619 AY771620 NM_001004416 NM_173568	7023	+	AF323660 NM_207627 AF323661 NM_207628	135457	+	AF323662 NM_207629	151784	+	AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2##AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1##AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323662|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207629|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	0.0	
chr5	130632100	130632177	reg1038443.p2	3.562	+	TSC_hg19_v1_chr5_+_130599794 BC058909	-32338	+	AK312406 TSC_hg19_v1_chr5_+_130599768	-32370	+	TSC_hg19_v1_chr5_+_130599764 BC023555 BC050430	-32382	+	AF478468 AF478469 AB527407 TSC_hg19_v1_chr5_-_130970764	338619	-	BC140820 BC144627 TSC_hg19_v1_chr5_-_130970834	338681	-	BC133703 TSC_hg19_v1_chr5_-_130970893 AF394782 AK302640	338740	-	BC058909|CDC42SE2|56990|CDC42 small effector 2##AK312406|CDC42SE2|56990|CDC42 small effector 2##BC023555|CDC42SE2|56990|CDC42 small effector 2##BC050430|CDC42SE2|56990|CDC42 small effector 2##AF478468|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF478469|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC140820|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC144627|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC133703|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF394782|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AK302640|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	0.0	
chr5	1489001	1489133	reg1035104.p2	3.562	+	S46955 EF174603 M95167 NM_001044	-43541	-	AB045223 DQ892147 DQ895343 AK027306 BC025305 NM_030782 TSC_hg19_v1_chr5_-_1345095	-144045	-	JF896283 JF896284 AB085628 AB086379 AB086950 JF896280 JF896286 AF015950 AX810036 AX810378 AF018167 NM_001193376 NM_198253	-193976	-	CU676500 BC020166 AK090444 TSC_hg19_v1_chr5_-_1494996	5867	-	TSC_hg19_v1_chr5_-_1523908 AB244719 AB463849	34867	-	TSC_hg19_v1_chr5_-_1524086 NM_024830	34995	-	S46955|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##EF174603|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##M95167|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##NM_001044|SLC6A3|6531|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3##AB045223|CLPTM1L|81037|CLPTM1-like##DQ892147|CLPTM1L|81037|CLPTM1-like##DQ895343|CLPTM1L|81037|CLPTM1-like##AK027306|CLPTM1L|81037|CLPTM1-like##BC025305|CLPTM1L|81037|CLPTM1-like##NM_030782|CLPTM1L|81037|CLPTM1-like##JF896283|TERT|7015|telomerase reverse transcriptase##JF896284|TERT|7015|telomerase reverse transcriptase##AB085628|TERT|7015|telomerase reverse transcriptase##AB086379|TERT|7015|telomerase reverse transcriptase##AB086950|TERT|7015|telomerase reverse transcriptase##JF896280|TERT|7015|telomerase reverse transcriptase##AF015950|TERT|7015|telomerase reverse transcriptase##AX810036|TERT|7015|telomerase reverse transcriptase##AX810378|TERT|7015|telomerase reverse transcriptase##AF018167|TERT|7015|telomerase reverse transcriptase##NM_001193376|TERT|7015|telomerase reverse transcriptase##NM_198253|TERT|7015|telomerase reverse transcriptase##BC020166|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AK090444|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##AB244719|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1##NM_024830|LPCAT1|79888|lysophosphatidylcholine acyltransferase 1	0.0	
chr5	318852	318996	reg1029856.p2	3.562	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-14634	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-47119	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-47156	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	124306	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	124426	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	154188	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.797395	CTCF.p2:27:0.741
chr1	117057775	117057842	reg1039497.p1	3.561	+	TSC_hg19_v1_chr1_-_116961216 AK309389	-96570	-	TSC_hg19_v1_chr1_-_116961205 BC007373 BC018892 BC028281 BC069003 AK309872 BC098428	-96618	-	AK296362 NM_001160234	-131817	+	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	55807	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	55869	-	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	152575	-	AK309389|ATP1A1OS|84852|ATP1A1 opposite strand##BC007373|ATP1A1OS|84852|ATP1A1 opposite strand##BC018892|ATP1A1OS|84852|ATP1A1 opposite strand##BC028281|ATP1A1OS|84852|ATP1A1 opposite strand##BC069003|ATP1A1OS|84852|ATP1A1 opposite strand##AK309872|ATP1A1OS|84852|ATP1A1 opposite strand##BC098428|ATP1A1OS|84852|ATP1A1 opposite strand##AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3	0.0	
chr11	47021272	47021339	reg1035841.p1	3.561	+	TSC_hg19_v1_chr11_+_46958328 AK316318 NM_001003676 NM_001003677 NM_001003678 NM_024113 AK315639 BC001860 BC009455 AL136575 BC052291 BC013988 AK300813 AK025863 AK293609 AB528079 AM393584 AM393807 CR457351 CU679361 CU680726	-63013	+	TSC_hg19_v1_chr11_-_46940102 AB384531 AB231861 BC136667 BC136668 AB084910 NM_002334 BC110808	-81243	-	TSC_hg19_v1_chr11_-_46867841 NM_001008938 NM_014756	-153452	-	AK301785 AL834337 EU832352 EU832437 AK300347 BC036823 AK027482 TSC_hg19_v1_chr11_-_47198413 AK304541 BC030148	177094	-	TSC_hg19_v1_chr11_-_47198431 AK315992 AK098324	177128	-	NM_001242832 NM_032389	177370	-	AK316318|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003676|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003677|C11orf49|79096|chromosome 11 open reading frame 49##NM_001003678|C11orf49|79096|chromosome 11 open reading frame 49##NM_024113|C11orf49|79096|chromosome 11 open reading frame 49##AK315639|C11orf49|79096|chromosome 11 open reading frame 49##BC001860|C11orf49|79096|chromosome 11 open reading frame 49##BC009455|C11orf49|79096|chromosome 11 open reading frame 49##AL136575|C11orf49|79096|chromosome 11 open reading frame 49##BC052291|C11orf49|79096|chromosome 11 open reading frame 49##BC013988|C11orf49|79096|chromosome 11 open reading frame 49##AK300813|C11orf49|79096|chromosome 11 open reading frame 49##AK025863|C11orf49|79096|chromosome 11 open reading frame 49##AK293609|C11orf49|79096|chromosome 11 open reading frame 49##AM393584|C11orf49|79096|chromosome 11 open reading frame 49##AM393807|C11orf49|79096|chromosome 11 open reading frame 49##CR457351|C11orf49|79096|chromosome 11 open reading frame 49##AB231861|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136667|LRP4|4038|low density lipoprotein receptor-related protein 4##BC136668|LRP4|4038|low density lipoprotein receptor-related protein 4##AB084910|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_002334|LRP4|4038|low density lipoprotein receptor-related protein 4##NM_001008938|CKAP5|9793|cytoskeleton associated protein 5##NM_014756|CKAP5|9793|cytoskeleton associated protein 5##AK301785|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AL834337|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832352|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##EU832437|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK300347|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC036823|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK027482|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK304541|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##BC030148|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK315992|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##AK098324|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_001242832|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2##NM_032389|ARFGAP2|84364|ADP-ribosylation factor GTPase activating protein 2	0.0	
chr1	19786206	19786318	reg1038893.p1	3.561	+	NM_001040125 NM_001040126 NM_017765 TSC_hg19_v1_chr1_+_19638819 AK000327 AK130175 AK125580 AK130171 AK172745 BC015324	-147467	+	BC007352 BC012171 TSC_hg19_v1_chr1_-_19638614 BC010852 NM_003689	-147628	-	TSC_hg19_v1_chr1_-_19638598 Y16675 AF026947 AK225267	-147657	-	TSC_hg19_v1_chr1_-_19811972 AK313113 BC107752	25705	-	TSC_hg19_v1_chr1_-_19812006 AK125085	25744	-	NM_001206540 NM_004930 TSC_hg19_v1_chr1_-_19812073	25827	-	NM_001040125|PQLC2|54896|PQ loop repeat containing 2##NM_001040126|PQLC2|54896|PQ loop repeat containing 2##NM_017765|PQLC2|54896|PQ loop repeat containing 2##AK000327|PQLC2|54896|PQ loop repeat containing 2##AK130175|PQLC2|54896|PQ loop repeat containing 2##AK125580|PQLC2|54896|PQ loop repeat containing 2##AK130171|PQLC2|54896|PQ loop repeat containing 2##AK172745|PQLC2|54896|PQ loop repeat containing 2##BC015324|PQLC2|54896|PQ loop repeat containing 2##BC007352|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC012171|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##BC010852|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##NM_003689|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##Y16675|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AF026947|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AK225267|AKR7A2|8574|aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)##AK313113|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##BC107752|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##AK125085|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_001206540|CAPZB|832|capping protein (actin filament) muscle Z-line, beta##NM_004930|CAPZB|832|capping protein (actin filament) muscle Z-line, beta	0.0	
chr1	249099021	249099087	reg1026779.p1	3.561	+	NM_001004734 BC137188 BC137189	-253438	-	NM_001001824	-284870	-	NM_001001827 AB528813	-296495	-	AY358453 TSC_hg19_v1_chr1_-_249120082 AK056382 NM_030645	21054	-	TSC_hg19_v1_chr1_+_249132449 BC029310	33403	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	33491	+	NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##NM_001001824|OR2T27|403239|olfactory receptor, family 2, subfamily T, member 27##NM_001001827|OR2T35|403244|olfactory receptor, family 2, subfamily T, member 35##AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like##AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like##BC029310|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672	0.0	
chr18	45550317	45550432	reg1043360.p1	3.561	+	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	-92885	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	-93159	-	BC014840 NM_005901	-93449	-	AM988836 AK296709 NM_001039360 EF120357	113325	-	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	385335	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	515399	+	NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor	0.86886	CTCF.p2:-24:0.869
chr18	61409127	61409196	reg1033289.p1	3.561	+	AK292775 AK296705 AK309537 AK309970 NM_080475	-38968	+	S66896 AB046399 AK222746 AK222753 AK308383 AK310948 AK314805 BC005224 BC008483 AK307261 NM_006919	-80007	-	U19557 BC008399 BC017401 NM_002974 AK292212	-97653	-	NM_001040147 D88575	11130	+	NM_003784 AF027866 AK300828 BC069417 BC069442 BC069547 AK290876 BC106743 BC106744	33518	+	AK313159 BC012609 NM_001143818 NM_002575 Y00630 J02685 J03603 M18082	145802	+	AK292775|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK296705|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK309537|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##AK309970|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##NM_080475|SERPINB11|89778|serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)##S66896|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AB046399|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK222746|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK222753|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK308383|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK310948|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##AK314805|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##BC005224|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##BC008483|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##NM_006919|SERPINB3|6317|serpin peptidase inhibitor, clade B (ovalbumin), member 3##U19557|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##BC008399|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##BC017401|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##NM_002974|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##AK292212|SERPINB4|6318|serpin peptidase inhibitor, clade B (ovalbumin), member 4##NM_001040147|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##D88575|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##NM_003784|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AF027866|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK300828|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069417|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069442|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC069547|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK290876|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106743|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##BC106744|SERPINB7|8710|serpin peptidase inhibitor, clade B (ovalbumin), member 7##AK313159|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##BC012609|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_001143818|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##NM_002575|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##Y00630|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J02685|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##J03603|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2##M18082|SERPINB2|5055|serpin peptidase inhibitor, clade B (ovalbumin), member 2	0.128984	
chr19	12902313	12902419	reg1037640.p2	3.561	+	AK222532 TSC_hg19_v1_chr19_+_12902299 AK313737 BC110372 BC004250 BC009465 BC009466 NM_002229 X51345	-53	+	TSC_hg19_v1_chr19_+_12902286 DQ650707	-76	+	TSC_hg19_v1_chr19_-_12886422 NM_001100176 NM_013312	-15939	-	BC000452 BC003022 BC064138 TSC_hg19_v1_chr19_-_12912615 Z22548 AK289485 AK293957 BC039428 AK022395 NM_005809 NM_181738	10298	-	TSC_hg19_v1_chr19_+_12917397 AK315327	15031	+	TSC_hg19_v1_chr19_+_12917432 NM_006397 BC011748 AY363912 Z97029 CR456841	15082	+	AK222532|JUNB|3726|jun B proto-oncogene##AK313737|JUNB|3726|jun B proto-oncogene##BC004250|JUNB|3726|jun B proto-oncogene##BC009465|JUNB|3726|jun B proto-oncogene##BC009466|JUNB|3726|jun B proto-oncogene##NM_002229|JUNB|3726|jun B proto-oncogene##X51345|JUNB|3726|jun B proto-oncogene##NM_001100176|HOOK2|29911|hook homolog 2 (Drosophila)##NM_013312|HOOK2|29911|hook homolog 2 (Drosophila)##BC000452|PRDX2|7001|peroxiredoxin 2##BC003022|PRDX2|7001|peroxiredoxin 2##BC064138|PRDX2|7001|peroxiredoxin 2##Z22548|PRDX2|7001|peroxiredoxin 2##AK289485|PRDX2|7001|peroxiredoxin 2##AK293957|PRDX2|7001|peroxiredoxin 2##BC039428|PRDX2|7001|peroxiredoxin 2##AK022395|PRDX2|7001|peroxiredoxin 2##NM_005809|PRDX2|7001|peroxiredoxin 2##NM_181738|PRDX2|7001|peroxiredoxin 2##AK315327|RNASEH2A|10535|ribonuclease H2, subunit A##NM_006397|RNASEH2A|10535|ribonuclease H2, subunit A##BC011748|RNASEH2A|10535|ribonuclease H2, subunit A##AY363912|RNASEH2A|10535|ribonuclease H2, subunit A##Z97029|RNASEH2A|10535|ribonuclease H2, subunit A##CR456841|RNASEH2A|10535|ribonuclease H2, subunit A	0.0	
chr19	55118660	55118746	reg1030509.p2	3.561	+	BC047007 AK290919 AK311226 AF025530 NM_006863 BC032238 BC063009 AF025529	-13618	+	TSC_hg19_v1_chr19_+_55085279 U70665 BC017412 AK222651 AF025531 U82276 BC027916 EU915609 EU915610 CU675976 AF041034 U82277 U82278	-33394	+	TSC_hg19_v1_chr19_+_55085256 NM_001130917 NM_006866 U82275 AK130170	-33451	+	AK311555 BC015731 NM_006669 AK292028	9934	+	NM_001081638 NM_001081639 TSC_hg19_v1_chr19_+_55141934 AK223310 AF283984 AF004230 NM_001081637 AF283985	23264	+	NM_001081438 NM_006847	55420	+	BC047007|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AK290919|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AK311226|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AF025530|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##NM_006863|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##BC032238|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##BC063009|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##AF025529|LILRA1|11024|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1##U70665|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC017412|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AK222651|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AF025531|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82276|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC027916|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##EU915609|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##EU915610|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82277|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82278|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_001130917|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##NM_006866|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##U82275|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##AK130170|LILRA2|11027|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2##BC015731|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_006669|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AK292028|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081638|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081639|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AK223310|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AF283984|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081637|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##AF283985|LILRB1|10859|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 1##NM_001081438|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4##NM_006847|LILRB4|11006|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 4	0.0	
chr1	9633896	9634040	reg1036159.p2	3.561	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-34332	+	TSC_hg19_v1_chr1_+_9599545 NM_032315 AJ880283 BC073135	-34436	+	TSC_hg19_v1_chr1_+_9415945 CU677397	-218022	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	14988	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	77836	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	249927	-	BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##NM_032315|SLC25A33|84275|solute carrier family 25, member 33##AJ880283|SLC25A33|84275|solute carrier family 25, member 33##BC073135|SLC25A33|84275|solute carrier family 25, member 33##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1	0.875961	CTCF.p2:17:0.876
chr2	14020486	14020666	reg1041634.p1	3.561	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-1162179	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	-1162660	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-1163323	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	752245	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	752275	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	1680853	-	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence	0.0	
chr2	97193503	97193582	reg1024333.p2	3.561	+	TSC_hg19_v1_chr2_+_97001519 BC024211 AK303725 AK291053 AK308050 AK310649 AK299248 D38553 CU692884 DQ893432 EU176758	-192006	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	-192066	+	NM_178495 NM_001163524 BC034503	-201594	+	NM_212481 AK307768 TSC_hg19_v1_chr2_+_97202485 AK300173 AK304566 BX648918 M62324 BC032488 BC067301	8943	+	TSC_hg19_v1_chr2_-_97304050 AF311326 BC063792 AK311617 AK314367 AK302646	110477	-	TSC_hg19_v1_chr2_-_97304062 AB037731 BC015469	110525	-	BC024211|NCAPH|23397|non-SMC condensin I complex, subunit H##AK303725|NCAPH|23397|non-SMC condensin I complex, subunit H##AK291053|NCAPH|23397|non-SMC condensin I complex, subunit H##AK308050|NCAPH|23397|non-SMC condensin I complex, subunit H##AK310649|NCAPH|23397|non-SMC condensin I complex, subunit H##AK299248|NCAPH|23397|non-SMC condensin I complex, subunit H##D38553|NCAPH|23397|non-SMC condensin I complex, subunit H##DQ893432|NCAPH|23397|non-SMC condensin I complex, subunit H##EU176758|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H##NM_178495|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163524|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC034503|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_212481|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK307768|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK300173|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AK304566|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BX648918|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##M62324|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC032488|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##BC067301|ARID5A|10865|AT rich interactive domain 5A (MRF1-like)##AF311326|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC063792|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK311617|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK314367|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AK302646|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##AB037731|KANSL3|55683|KAT8 regulatory NSL complex subunit 3##BC015469|KANSL3|55683|KAT8 regulatory NSL complex subunit 3	0.126898	
chr3	196249665	196249765	reg1039962.p1	3.561	+	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	-7502	-	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	-19137	-	TSC_hg19_v1_chr3_-_196159304 NM_015562	-90382	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	45675	-	AK025697 TSC_hg19_v1_chr3_+_196295533	45792	+	TSC_hg19_v1_chr3_+_196295733 NM_001105573	46017	+	AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##NM_015562|UBXN7|26043|UBX domain protein 7##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53##AK025697|FBXO45|200933|F-box protein 45##NM_001105573|FBXO45|200933|F-box protein 45	0.962372	CTCF.p2:-3:0.962
chr5	173213606	173213748	reg1019590.p1	3.561	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-170004	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-170049	-	BC003114 TSC_hg19_v1_chr5_-_173043602	-170080	-	TSC_hg19_v1_chr5_+_173315343 NM_030627	101701	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	202513	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	259034	+	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein	0.0	
chr10	121028332	121028512	reg1022399.p1	3.560	+	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-61161	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-90075	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-90119	-	NM_002925	267622	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	273768	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	327686	-	BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.0	
chr11	76309554	76309635	reg1002808.p1	3.560	+	TSC_hg19_v1_chr11_+_76156061 AK304043 BC033404 NM_020193 AK309621 BC021688 AK125114	-153491	+	TSC_hg19_v1_chr11_-_76155721 AK054718	-153869	-	TSC_hg19_v1_chr11_+_76092383 AK125821 BC040665 AK095089	-217171	+	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	71374	-	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	72215	-	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	184683	+	AK304043|C11orf30|56946|chromosome 11 open reading frame 30##BC033404|C11orf30|56946|chromosome 11 open reading frame 30##NM_020193|C11orf30|56946|chromosome 11 open reading frame 30##AK309621|C11orf30|56946|chromosome 11 open reading frame 30##BC021688|C11orf30|56946|chromosome 11 open reading frame 30##AK125114|C11orf30|56946|chromosome 11 open reading frame 30##AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)	0.0	
chr12	12224063	12224170	reg1033473.p2	3.560	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	-233	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-421130	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-421342	+	AF281254 AF281255 NM_030766 NM_138722	285	+	AK074543 TSC_hg19_v1_chr12_-_12291395	67268	-	BC117136 BC126405 BC143725 AF074264 NM_002336 TSC_hg19_v1_chr12_-_12419947	195726	-	AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6##BC117136|LRP6|4040|low density lipoprotein receptor-related protein 6##BC126405|LRP6|4040|low density lipoprotein receptor-related protein 6##BC143725|LRP6|4040|low density lipoprotein receptor-related protein 6##AF074264|LRP6|4040|low density lipoprotein receptor-related protein 6##NM_002336|LRP6|4040|low density lipoprotein receptor-related protein 6	0.603587	CTCF.p2:-35:0.604
chr15	70392864	70393000	reg1033323.p3	3.560	+	TSC_hg19_v1_chr15_-_70390231 BC012004 AB046767 AK315058 BC043247 NM_001105192 NM_005078 NM_020908	-2689	-	BC015729 TSC_hg19_v1_chr15_-_70390227 AK304459	-2705	-	BC015421 TSC_hg19_v1_chr15_-_70341948	-51023	-	TSC_hg19_v1_chr15_-_70878946 BC040579	486012	-	BC016881 AL834243 NM_001008224 AK055435	601695	-	AB046781 BC113407 BC113409 BC143266 BC143267 TSC_hg19_v1_chr15_-_71055898 AF322916 NM_018003	662910	-	BC012004|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AB046767|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK315058|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC043247|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_001105192|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_005078|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##NM_020908|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015729|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##AK304459|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC015421|TLE3|7090|transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila)##BC016881|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AL834243|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_001008224|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AK055435|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AB046781|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113407|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC113409|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143266|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##BC143267|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##AF322916|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats##NM_018003|UACA|55075|uveal autoantigen with coiled-coil domains and ankyrin repeats	0.092542	
chr16	56945813	56945901	reg1033595.p1	3.560	+	AK315298 NM_000339 NM_001126107 NM_001126108 AK223133 X91220 U44128 AB463268	-46725	+	AK294176 NM_001242796	-128468	+	NM_001242795 AK056637 TSC_hg19_v1_chr16_+_56815740	-130122	+	NM_001010989 NM_001010990 NM_014685	19890	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	20284	+	M30185 AK297699 NM_000078 TSC_hg19_v1_chr16_+_56995861 AK291586 BC025739 EU176529 CU693046 BT020064 M83573	49980	+	AK315298|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_000339|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126107|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126108|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK223133|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##X91220|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##U44128|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK294176|NUP93|9688|nucleoporin 93kDa##NM_001242796|NUP93|9688|nucleoporin 93kDa##NM_001242795|NUP93|9688|nucleoporin 93kDa##AK056637|NUP93|9688|nucleoporin 93kDa##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##M30185|CETP|1071|cholesteryl ester transfer protein, plasma##AK297699|CETP|1071|cholesteryl ester transfer protein, plasma##NM_000078|CETP|1071|cholesteryl ester transfer protein, plasma##AK291586|CETP|1071|cholesteryl ester transfer protein, plasma##BC025739|CETP|1071|cholesteryl ester transfer protein, plasma##EU176529|CETP|1071|cholesteryl ester transfer protein, plasma##BT020064|CETP|1071|cholesteryl ester transfer protein, plasma##M83573|CETP|1071|cholesteryl ester transfer protein, plasma	0.0	
chr21	36002787	36002957	reg1004400.p1	3.560	+	BT007363 CU678256 AF303449 U85266 TSC_hg19_v1_chr21_-_35987486 BC002864 AK092184 AX747397 NM_004414 AY325903	-15526	-	NM_203417 U85265	-16128	-	CR542065 AK299444 TSC_hg19_v1_chr21_-_35899121 AK293293 U85267 NM_203418	-103719	-	AF448438 AF448439 NM_053277	38815	+	S76350 GU070939 TSC_hg19_v1_chr21_-_36231874	228964	-	S76345 S76346 GU070941 TSC_hg19_v1_chr21_-_36252995	250064	-	BT007363|RCAN1|1827|regulator of calcineurin 1##AF303449|RCAN1|1827|regulator of calcineurin 1##U85266|RCAN1|1827|regulator of calcineurin 1##BC002864|RCAN1|1827|regulator of calcineurin 1##AK092184|RCAN1|1827|regulator of calcineurin 1##NM_004414|RCAN1|1827|regulator of calcineurin 1##AY325903|RCAN1|1827|regulator of calcineurin 1##NM_203417|RCAN1|1827|regulator of calcineurin 1##U85265|RCAN1|1827|regulator of calcineurin 1##CR542065|RCAN1|1827|regulator of calcineurin 1##AK299444|RCAN1|1827|regulator of calcineurin 1##AK293293|RCAN1|1827|regulator of calcineurin 1##U85267|RCAN1|1827|regulator of calcineurin 1##NM_203418|RCAN1|1827|regulator of calcineurin 1##AF448438|CLIC6|54102|chloride intracellular channel 6##AF448439|CLIC6|54102|chloride intracellular channel 6##NM_053277|CLIC6|54102|chloride intracellular channel 6##S76350|RUNX1|861|runt-related transcription factor 1##S76345|RUNX1|861|runt-related transcription factor 1##S76346|RUNX1|861|runt-related transcription factor 1	0.0	
chr4	177138774	177138913	reg1027533.p1	3.560	+	CU692400 TSC_hg19_v1_chr4_-_177116722 BC021731 BC029428 AY040204 NM_144644	-22076	-	TSC_hg19_v1_chr4_+_176987148 BC118549 BC118627 AK098748 DQ426895 DQ426896	-151674	+	BC146812 NM_170710 NM_181265 AF492460 TSC_hg19_v1_chr4_+_176987137	-151782	+	AY057053 CU688084 AK096441 BC065710 BX647857 NM_080874	51472	-	TSC_hg19_v1_chr4_+_177241098 NM_021928	102210	+	TSC_hg19_v1_chr4_+_177241122 AK026302 AL136660 AY359044 BC043490 BC053883 BC047290 CU690386 EU831652 EU831735	102325	+	BC021731|SPATA4|132851|spermatogenesis associated 4##BC029428|SPATA4|132851|spermatogenesis associated 4##AY040204|SPATA4|132851|spermatogenesis associated 4##NM_144644|SPATA4|132851|spermatogenesis associated 4##BC118549|WDR17|116966|WD repeat domain 17##BC118627|WDR17|116966|WD repeat domain 17##AK098748|WDR17|116966|WD repeat domain 17##DQ426895|WDR17|116966|WD repeat domain 17##DQ426896|WDR17|116966|WD repeat domain 17##BC146812|WDR17|116966|WD repeat domain 17##NM_170710|WDR17|116966|WD repeat domain 17##NM_181265|WDR17|116966|WD repeat domain 17##AF492460|WDR17|116966|WD repeat domain 17##AY057053|ASB5|140458|ankyrin repeat and SOCS box containing 5##AK096441|ASB5|140458|ankyrin repeat and SOCS box containing 5##BC065710|ASB5|140458|ankyrin repeat and SOCS box containing 5##BX647857|ASB5|140458|ankyrin repeat and SOCS box containing 5##NM_080874|ASB5|140458|ankyrin repeat and SOCS box containing 5##NM_021928|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AK026302|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AL136660|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##AY359044|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC043490|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC053883|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##BC047290|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831652|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)##EU831735|SPCS3|60559|signal peptidase complex subunit 3 homolog (S. cerevisiae)	0.0	
chr5	162781787	162781968	reg1036826.p1	3.560	+	NM_000816 NM_198903 NM_198904 BC052926 BC036030 X15376 BC059389 BC069348 BC074795 AK315200 AK299640	-1287032	+	NM_001127648 AB590312 DQ890915	-1504118	+	NM_001127647	-1504486	+	TSC_hg19_v1_chr5_+_162864606 AK316234 NM_004060 NM_199246 AK297190 AK312913 BC007093 BX538035 D78341 L49504 BC000196	82744	+	AB528197 AM392736 AM393438 FJ215684 AK094647 TSC_hg19_v1_chr5_-_162887097	105201	-	AK311957 TSC_hg19_v1_chr5_-_162887119 BC017934 BX538290 NM_145266	105256	-	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127647|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK316234|CCNG1|900|cyclin G1##NM_004060|CCNG1|900|cyclin G1##NM_199246|CCNG1|900|cyclin G1##AK297190|CCNG1|900|cyclin G1##AK312913|CCNG1|900|cyclin G1##BC007093|CCNG1|900|cyclin G1##BX538035|CCNG1|900|cyclin G1##D78341|CCNG1|900|cyclin G1##L49504|CCNG1|900|cyclin G1##BC000196|CCNG1|900|cyclin G1##AM392736|NUDCD2|134492|NudC domain containing 2##AM393438|NUDCD2|134492|NudC domain containing 2##FJ215684|NUDCD2|134492|NudC domain containing 2##AK311957|NUDCD2|134492|NudC domain containing 2##BC017934|NUDCD2|134492|NudC domain containing 2##BX538290|NUDCD2|134492|NudC domain containing 2##NM_145266|NUDCD2|134492|NudC domain containing 2	0.0	
chr6	21697216	21697324	reg1041792.p1	3.560	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	-30611	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	-102898	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1162547	+	BC015850 NM_000948	600459	-	X54394 X54393 GQ305133 M58594 NM_001163558	605777	-	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	872455	+	AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1	0.0	
chr7	102082307	102082488	reg1027215.p2	3.560	+	TSC_hg19_v1_chr7_+_102074021 AK056497 AK027639 AK300574	-8356	+	TSC_hg19_v1_chr7_+_102073995 NM_001126340 NM_032831	-8420	+	NM_024653 TSC_hg19_v1_chr7_+_102036839 AK023964 BC014298 DQ893168 DQ896466 AK294664	-45555	+	TSC_hg19_v1_chr7_-_102105305 CU678220 BC002820 BC017096	22836	-	AK000020 TSC_hg19_v1_chr7_-_102105307 AK026097 AK222689 NM_017621	22920	-	TSC_hg19_v1_chr7_+_102105430 AL133057 BC030547 NM_152892 AK290967 AK313771	23011	+	AK056497|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK027639|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##AK300574|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_001126340|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_032831|ORAI2|80228|ORAI calcium release-activated calcium modulator 2##NM_024653|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK023964|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##BC014298|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ893168|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##DQ896466|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##AK294664|PRKRIP1|79706|PRKR interacting protein 1 (IL11 inducible)##BC002820|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##BC017096|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK000020|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK026097|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AK222689|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##NM_017621|ALKBH4|54784|alkB, alkylation repair homolog 4 (E. coli)##AL133057|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##BC030547|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##NM_152892|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK290967|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK313771|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1	0.0	
chr7	116891927	116892002	reg1036729.p2	3.560	+	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	-231599	+	TSC_hg19_v1_chr7_+_116660271 AK093212	-231697	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	-298391	+	BC078170 AK056742 NM_003391 X07876	71371	-	HQ258436 AK093445 AX748131 BC126186 BC126188 BC144207 BC144212 AF461259 BC028695 BC034963 BC098399 BC068488 NM_130768	175581	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	228074	+	AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##AK093212|ST7|7982|suppression of tumorigenicity 7##AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2##HQ258436|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AK093445|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126186|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC126188|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144207|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC144212|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##AF461259|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC028695|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC034963|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC098399|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##BC068488|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##NM_130768|ASZ1|136991|ankyrin repeat, SAM and basic leucine zipper domain containing 1##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)	0.0	
chr7	151007727	151007840	reg1043086.p1	3.560	+	BX648385 TSC_hg19_v1_chr7_-_150974229 NM_003078 U66619	-33554	-	AY450431 BC002628 NM_001003802	-33964	-	TSC_hg19_v1_chr7_-_150946031 AY450430	-61742	-	TSC_hg19_v1_chr7_+_151038874 NM_001243351 NM_016118 AF300717	31059	+	TSC_hg19_v1_chr7_+_151038909 AF459743 AY129295 AK293159 AF155099	31131	+	AK056624 TSC_hg19_v1_chr7_-_151071775	63953	-	BX648385|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_003078|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##U66619|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##AY450431|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##BC002628|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_001003802|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##AY450430|SMARCD3|6604|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3##NM_001243351|NUB1|51667|negative regulator of ubiquitin-like proteins 1##NM_016118|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF300717|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF459743|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AY129295|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AK293159|NUB1|51667|negative regulator of ubiquitin-like proteins 1##AF155099|NUB1|51667|negative regulator of ubiquitin-like proteins 1	0.995991	CTCF.p2:4:0.996
chr10	76996038	76996218	reg1000260.p2	3.559	+	TSC_hg19_v1_chr10_-_76995794 CU690500 BC023663 AK302283 AK074421 AY358476 BC047774 NM_144589 AK290452	-357	-	BC012883 L08666 TSC_hg19_v1_chr10_+_76970608	-25518	+	TSC_hg19_v1_chr10_+_76970563 BC000165 BC072407 AK315919 AK296635	-25574	+	TSC_hg19_v1_chr10_-_77159861 AK092897 AX747796	163817	-	AK127647 TSC_hg19_v1_chr10_-_77160688	164542	-	TSC_hg19_v1_chr10_-_77161142 CU680472 EU446545 BC013011 BC021165	165082	-	BC023663|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK302283|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK074421|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AY358476|COMTD1|118881|catechol-O-methyltransferase domain containing 1##BC047774|COMTD1|118881|catechol-O-methyltransferase domain containing 1##NM_144589|COMTD1|118881|catechol-O-methyltransferase domain containing 1##AK290452|COMTD1|118881|catechol-O-methyltransferase domain containing 1##BC012883|VDAC2|7417|voltage-dependent anion channel 2##L08666|VDAC2|7417|voltage-dependent anion channel 2##BC000165|VDAC2|7417|voltage-dependent anion channel 2##BC072407|VDAC2|7417|voltage-dependent anion channel 2##AK315919|VDAC2|7417|voltage-dependent anion channel 2##AK296635|VDAC2|7417|voltage-dependent anion channel 2##AK092897|ZNF503|84858|zinc finger protein 503##AK127647|ZNF503|84858|zinc finger protein 503##EU446545|ZNF503|84858|zinc finger protein 503##BC013011|ZNF503|84858|zinc finger protein 503##BC021165|ZNF503|84858|zinc finger protein 503	0.0	
chr1	110036745	110036910	reg1006153.p2	3.559	+	NM_001134402 AK126707 NM_001134400 NM_001134403 NM_001134404 NM_182580 TSC_hg19_v1_chr1_+_110036712 AK299086 BX647509 AK096354 AK303546 BC093683 BC111999 BC143308 AK294992 AK128798	-131	+	TSC_hg19_v1_chr1_+_110026580 BC036849 NM_153340	-10281	+	TSC_hg19_v1_chr1_+_110009222 AK293082	-27606	+	TSC_hg19_v1_chr1_-_110052350 BC040879 AK295678 NM_020703	15507	-	AK290027 NM_031936 AF258342	45673	+	NM_006496 TSC_hg19_v1_chr1_+_110091203	54373	+	NM_001134402|CYB561D1|284613|cytochrome b-561 domain containing 1##AK126707|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134400|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134403|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_001134404|CYB561D1|284613|cytochrome b-561 domain containing 1##NM_182580|CYB561D1|284613|cytochrome b-561 domain containing 1##AK299086|CYB561D1|284613|cytochrome b-561 domain containing 1##BX647509|CYB561D1|284613|cytochrome b-561 domain containing 1##AK096354|CYB561D1|284613|cytochrome b-561 domain containing 1##AK303546|CYB561D1|284613|cytochrome b-561 domain containing 1##BC093683|CYB561D1|284613|cytochrome b-561 domain containing 1##BC111999|CYB561D1|284613|cytochrome b-561 domain containing 1##BC143308|CYB561D1|284613|cytochrome b-561 domain containing 1##AK294992|CYB561D1|284613|cytochrome b-561 domain containing 1##AK128798|CYB561D1|284613|cytochrome b-561 domain containing 1##BC036849|ATXN7L2|127002|ataxin 7-like 2##NM_153340|ATXN7L2|127002|ataxin 7-like 2##AK293082|SYPL2|284612|synaptophysin-like 2##BC040879|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK295678|AMIGO1|57463|adhesion molecule with Ig-like domain 1##NM_020703|AMIGO1|57463|adhesion molecule with Ig-like domain 1##AK290027|GPR61|83873|G protein-coupled receptor 61##NM_031936|GPR61|83873|G protein-coupled receptor 61##AF258342|GPR61|83873|G protein-coupled receptor 61##NM_006496|GNAI3|2773|guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 3	0.0	
chr11	32608245	32608344	reg1040005.p2	3.559	+	TSC_hg19_v1_chr11_+_32605376 AK131064 AK292139 AK304378 AK001768 AK300002 AF064603 BC051292 BC011937 BC019103 NM_006360 AK222564 AK307121 CU676384 AY769947 CR450300 DQ185042	-2896	+	TSC_hg19_v1_chr11_+_32605343 AK312512	-2954	+	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	-151225	-	BC146800 AK131470 NM_001008391 BC062749	207883	-	TSC_hg19_v1_chr11_+_32851476 BC010052 NM_024081 BC063393 AF326351	243256	+	TSC_hg19_v1_chr11_+_32914677 BC112935 NM_001076786	306281	+	AK131064|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK292139|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK304378|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK001768|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK300002|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AF064603|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC051292|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC011937|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC019103|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##NM_006360|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK222564|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK307121|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AY769947|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##CR450300|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##DQ185042|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK312512|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1##BC146800|CCDC73|493860|coiled-coil domain containing 73##AK131470|CCDC73|493860|coiled-coil domain containing 73##NM_001008391|CCDC73|493860|coiled-coil domain containing 73##BC062749|CCDC73|493860|coiled-coil domain containing 73##BC010052|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##NM_024081|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC063393|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##AF326351|PRRG4|79056|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)##BC112935|QSER1|79832|glutamine and serine rich 1##NM_001076786|QSER1|79832|glutamine and serine rich 1	0.128778	
chr1	152432879	152432995	reg1043872.p1	3.559	+	AF077831 AK291301 AK298640 AK316568 BC030807 NM_016190	-46199	-	AY827490 NM_001014342	-100456	-	L01090 NM_002016	-135259	-	NM_178438	50382	+	AJ243662 NM_019060	54040	+	BC131716 NM_178435	106300	-	AF077831|CRNN|49860|cornulin##AK291301|CRNN|49860|cornulin##AK298640|CRNN|49860|cornulin##AK316568|CRNN|49860|cornulin##BC030807|CRNN|49860|cornulin##NM_016190|CRNN|49860|cornulin##AY827490|FLG2|388698|filaggrin family member 2##NM_001014342|FLG2|388698|filaggrin family member 2##L01090|FLG|2312|filaggrin##NM_002016|FLG|2312|filaggrin##NM_178438|LCE5A|254910|late cornified envelope 5A##AJ243662|CRCT1|54544|cysteine-rich C-terminal 1##NM_019060|CRCT1|54544|cysteine-rich C-terminal 1##BC131716|LCE3E|353145|late cornified envelope 3E##NM_178435|LCE3E|353145|late cornified envelope 3E	0.998572	CTCF.p2:4:0.999
chr1	233733200	233733314	reg1033632.p1	3.559	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	-269674	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	-301774	-	TSC_hg19_v1_chr1_+_233086381 AF416713	-646868	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	16566	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	16662	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	307355	+	AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3	0.0	
chr1	25293402	25293468	reg1037256.p2	3.559	+	BC013362 AK310945 NM_001031680 AF022726	-1893	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-36649	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-36696	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	265552	-	BC065040 TSC_hg19_v1_chr1_-_25573922	280488	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	280538	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr1	32805273	32805421	reg1038841.p1	3.559	+	TSC_hg19_v1_chr1_-_32801835 AB528178 CU688192 AM393505 DQ893237 DQ896567 X70326 AL713653 AY007131 BC007904 BC066915 NM_023009	-3616	-	TSC_hg19_v1_chr1_+_32757740 BC000301 AK299792 AY627042 AB451297 AB451430 AB463736 CR541717 CU674144 DQ891398 DQ894577	-47607	+	D50405 NM_004964 TSC_hg19_v1_chr1_+_32757707	-47639	+	BC035354 NM_052841	22482	+	NM_001167676	22496	-	CR457252 TSC_hg19_v1_chr1_-_32860030 BC010573 CR749228 BX641056 AK300231 BC026322 AK297604 AK300306 AK001138 AK225717 AK293454 BC028381 AK021440 AK297352 AK225026 AK304477 AK316172 NM_001143888 NM_001143889 NM_001143890 NM_018045	54690	-	AM393505|MARCKSL1|65108|MARCKS-like 1##DQ893237|MARCKSL1|65108|MARCKS-like 1##DQ896567|MARCKSL1|65108|MARCKS-like 1##X70326|MARCKSL1|65108|MARCKS-like 1##AL713653|MARCKSL1|65108|MARCKS-like 1##AY007131|MARCKSL1|65108|MARCKS-like 1##BC007904|MARCKSL1|65108|MARCKS-like 1##BC066915|MARCKSL1|65108|MARCKS-like 1##NM_023009|MARCKSL1|65108|MARCKS-like 1##BC000301|HDAC1|3065|histone deacetylase 1##AK299792|HDAC1|3065|histone deacetylase 1##AY627042|HDAC1|3065|histone deacetylase 1##AB451297|HDAC1|3065|histone deacetylase 1##AB451430|HDAC1|3065|histone deacetylase 1##CR541717|HDAC1|3065|histone deacetylase 1##DQ891398|HDAC1|3065|histone deacetylase 1##DQ894577|HDAC1|3065|histone deacetylase 1##D50405|HDAC1|3065|histone deacetylase 1##NM_004964|HDAC1|3065|histone deacetylase 1##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071##CR457252|BSDC1|55108|BSD domain containing 1##BC010573|BSDC1|55108|BSD domain containing 1##CR749228|BSDC1|55108|BSD domain containing 1##BX641056|BSDC1|55108|BSD domain containing 1##AK300231|BSDC1|55108|BSD domain containing 1##BC026322|BSDC1|55108|BSD domain containing 1##AK297604|BSDC1|55108|BSD domain containing 1##AK300306|BSDC1|55108|BSD domain containing 1##AK001138|BSDC1|55108|BSD domain containing 1##AK225717|BSDC1|55108|BSD domain containing 1##AK293454|BSDC1|55108|BSD domain containing 1##BC028381|BSDC1|55108|BSD domain containing 1##AK021440|BSDC1|55108|BSD domain containing 1##AK297352|BSDC1|55108|BSD domain containing 1##AK225026|BSDC1|55108|BSD domain containing 1##AK304477|BSDC1|55108|BSD domain containing 1##AK316172|BSDC1|55108|BSD domain containing 1##NM_001143888|BSDC1|55108|BSD domain containing 1##NM_001143889|BSDC1|55108|BSD domain containing 1##NM_001143890|BSDC1|55108|BSD domain containing 1##NM_018045|BSDC1|55108|BSD domain containing 1	0.0	
chr14	22590322	22590400	reg1039665.p2	3.559	+	AB463964 NM_001001912 AY726598	-457039	+	NM_001005466 AB529274 BC137371 BC137382	-487315	-	AB528817 NM_001005465	-551487	-	X58763 TSC_hg19_v1_chr14_+_22989364	398988	+	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	467725	-	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	467773	-	NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1	0.136216	
chr14	52481012	52481078	reg1041926.p1	3.559	+	TSC_hg19_v1_chr14_+_52456323 EU446806 AB463506 AY817175	-24706	+	AF087877 AF100755 AF151857 DQ525179 NM_016039 TSC_hg19_v1_chr14_+_52456231 AK312004 BC001722	-24791	+	TSC_hg19_v1_chr14_+_52327416 BC020774	-153609	+	AJ223500 D86425 AB385187 CU690132 TSC_hg19_v1_chr14_-_52535721	54677	-	TSC_hg19_v1_chr14_-_52535737 AK300462	54705	-	BC035608 TSC_hg19_v1_chr14_-_52535777 AK291652	54729	-	EU446806|C14orf166|51637|chromosome 14 open reading frame 166##AY817175|C14orf166|51637|chromosome 14 open reading frame 166##AF087877|C14orf166|51637|chromosome 14 open reading frame 166##AF100755|C14orf166|51637|chromosome 14 open reading frame 166##AF151857|C14orf166|51637|chromosome 14 open reading frame 166##DQ525179|C14orf166|51637|chromosome 14 open reading frame 166##NM_016039|C14orf166|51637|chromosome 14 open reading frame 166##AK312004|C14orf166|51637|chromosome 14 open reading frame 166##BC001722|C14orf166|51637|chromosome 14 open reading frame 166##BC020774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AJ223500|NID2|22795|nidogen 2 (osteonidogen)##D86425|NID2|22795|nidogen 2 (osteonidogen)##AK300462|NID2|22795|nidogen 2 (osteonidogen)##BC035608|NID2|22795|nidogen 2 (osteonidogen)##AK291652|NID2|22795|nidogen 2 (osteonidogen)	0.0	
chr15	29561858	29561943	reg1032597.p1	3.559	+	NM_001130414 NM_005503 AF047348 BC082986	-348051	+	TSC_hg19_v1_chr15_+_29077475 BC018626	-484418	+	TSC_hg19_v1_chr15_+_29033278 AK302529	-528577	+	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	70	-	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	129	-	NM_015307	301026	-	NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1	0.0	
chr16	83986876	83986967	reg1037744.p2	3.559	+	NM_182981 TSC_hg19_v1_chr16_+_83986844 AK290383 AY258068 AY037158 BC020434 BC032476 BC093687 BC113417	-37	+	BC052592 NM_012213 TSC_hg19_v1_chr16_+_83932732 AF090834 AF153679 BC000286 AF097832	-54152	+	TSC_hg19_v1_chr16_+_83841642 BC007515 AY320409 AK172732 AB463720 EU831680	-145265	+	TSC_hg19_v1_chr16_+_84002230 AY299331 NM_019065 BC131615 AK127376	15291	+	NM_001080442	88840	-	TSC_hg19_v1_chr16_-_84150441 AK291773 BC114555 BC114961 AK299067	163491	-	NM_182981|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AK290383|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY258068|OSGIN1|29948|oxidative stress induced growth inhibitor 1##AY037158|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC020434|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC032476|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC093687|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC113417|OSGIN1|29948|oxidative stress induced growth inhibitor 1##BC052592|MLYCD|23417|malonyl-CoA decarboxylase##NM_012213|MLYCD|23417|malonyl-CoA decarboxylase##AF090834|MLYCD|23417|malonyl-CoA decarboxylase##AF153679|MLYCD|23417|malonyl-CoA decarboxylase##BC000286|MLYCD|23417|malonyl-CoA decarboxylase##AF097832|MLYCD|23417|malonyl-CoA decarboxylase##BC007515|HSBP1|3281|heat shock factor binding protein 1##AY320409|HSBP1|3281|heat shock factor binding protein 1##AK172732|HSBP1|3281|heat shock factor binding protein 1##EU831680|HSBP1|3281|heat shock factor binding protein 1##AY299331|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_019065|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##BC131615|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##AK127376|NECAB2|54550|N-terminal EF-hand calcium binding protein 2##NM_001080442|SLC38A8|146167|solute carrier family 38, member 8##AK291773|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114555|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##BC114961|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1##AK299067|MBTPS1|8720|membrane-bound transcription factor peptidase, site 1	0.0	
chr17	7186000	7186132	reg1034910.p1	3.559	+	TSC_hg19_v1_chr17_+_7185036 AK313372 BC034387 NM_001042 M20747 BC069615 BC069621 BC113592 BC126164 AB527885 CU686940 HQ258267	-951	+	TSC_hg19_v1_chr17_-_7166506 AJ011497 NM_001185022	-19542	-	NM_001185023 NM_001307	-19803	-	TSC_hg19_v1_chr17_-_7197854 BC033800 BC047760 AK315035	11769	-	TSC_hg19_v1_chr17_-_7197866 AF096834 NM_015982	11813	-	TSC_hg19_v1_chr17_-_7197897 AB208818	11861	-	AK313372|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##BC034387|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##NM_001042|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##M20747|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##BC069615|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##BC069621|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##BC113592|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##BC126164|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##HQ258267|SLC2A4|6517|solute carrier family 2 (facilitated glucose transporter), member 4##AJ011497|CLDN7|1366|claudin 7##NM_001185022|CLDN7|1366|claudin 7##NM_001185023|CLDN7|1366|claudin 7##NM_001307|CLDN7|1366|claudin 7##BC033800|YBX2|51087|Y box binding protein 2##BC047760|YBX2|51087|Y box binding protein 2##AK315035|YBX2|51087|Y box binding protein 2##AF096834|YBX2|51087|Y box binding protein 2##NM_015982|YBX2|51087|Y box binding protein 2##AB208818|YBX2|51087|Y box binding protein 2	0.0	
chr19	45257981	45258048	reg1038527.p2	3.559	+	TSC_hg19_v1_chr19_+_45251964 NM_005178 BC064993 M31732	-6033	+	BC144608 NM_001039213	-55594	+	BC083499 NM_001127893 NM_020219	-83291	+	AF117646 AF117647 NM_001130852 NM_012116 AB028645 BC028915 AB527766 DQ891243 DQ894493 CU688574	23142	+	TSC_hg19_v1_chr19_+_45312359 BC014065 NM_001013257 NM_005581 X83425 BC036745 X80026 BC050450 AB463427 CU690688 HE572749	54342	+	NM_001042724 NM_002856 TSC_hg19_v1_chr19_+_45349482	91428	+	NM_005178|BCL3|602|B-cell CLL/lymphoma 3##BC064993|BCL3|602|B-cell CLL/lymphoma 3##M31732|BCL3|602|B-cell CLL/lymphoma 3##BC144608|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##NM_001039213|CEACAM16|388551|carcinoembryonic antigen-related cell adhesion molecule 16##BC083499|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_001127893|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##NM_020219|CEACAM19|56971|carcinoembryonic antigen-related cell adhesion molecule 19##AF117646|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AF117647|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001130852|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_012116|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##AB028645|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##BC028915|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ891243|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##DQ894493|CBLC|23624|Cas-Br-M (murine) ecotropic retroviral transforming sequence c##NM_001013257|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_005581|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X83425|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC036745|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##X80026|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##BC050450|BCAM|4059|basal cell adhesion molecule (Lutheran blood group)##NM_001042724|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)##NM_002856|PVRL2|5819|poliovirus receptor-related 2 (herpesvirus entry mediator B)	0.0	
chr2	27308501	27308656	reg1020621.p1	3.559	+	TSC_hg19_v1_chr2_+_27301693 BC007530 BC017284 BC136279 AF088916 AL050138	-6727	+	NM_007046 BC142638 AK075517 AK307539 BC090957 BC142688 TSC_hg19_v1_chr2_+_27301565	-7077	+	TSC_hg19_v1_chr2_-_27294519 AL049447 BC105283 NM_001134693	-14045	-	NM_000221 NM_006488 TSC_hg19_v1_chr2_+_27309615 BC006233	1078	+	TSC_hg19_v1_chr2_+_27310090 BX648873 AK130033 AK223075 X78678 AB528158 AM393286 CR456801	1525	+	AK302185 NM_001166241	25388	-	BC007530|EMILIN1|11117|elastin microfibril interfacer 1##BC017284|EMILIN1|11117|elastin microfibril interfacer 1##BC136279|EMILIN1|11117|elastin microfibril interfacer 1##AF088916|EMILIN1|11117|elastin microfibril interfacer 1##AL050138|EMILIN1|11117|elastin microfibril interfacer 1##NM_007046|EMILIN1|11117|elastin microfibril interfacer 1##BC142638|EMILIN1|11117|elastin microfibril interfacer 1##AK075517|EMILIN1|11117|elastin microfibril interfacer 1##AK307539|EMILIN1|11117|elastin microfibril interfacer 1##BC090957|EMILIN1|11117|elastin microfibril interfacer 1##BC142688|EMILIN1|11117|elastin microfibril interfacer 1##AL049447|OST4|100128731|oligosaccharyltransferase 4 homolog (S. cerevisiae)##BC105283|OST4|100128731|oligosaccharyltransferase 4 homolog (S. cerevisiae)##NM_001134693|OST4|100128731|oligosaccharyltransferase 4 homolog (S. cerevisiae)##NM_000221|KHK|3795|ketohexokinase (fructokinase)##NM_006488|KHK|3795|ketohexokinase (fructokinase)##BC006233|KHK|3795|ketohexokinase (fructokinase)##BX648873|KHK|3795|ketohexokinase (fructokinase)##AK130033|KHK|3795|ketohexokinase (fructokinase)##AK223075|KHK|3795|ketohexokinase (fructokinase)##X78678|KHK|3795|ketohexokinase (fructokinase)##AM393286|KHK|3795|ketohexokinase (fructokinase)##CR456801|KHK|3795|ketohexokinase (fructokinase)##AK302185|CGREF1|10669|cell growth regulator with EF-hand domain 1##NM_001166241|CGREF1|10669|cell growth regulator with EF-hand domain 1	0.0	
chr2	43709413	43709493	reg1030593.p1	3.559	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-255711	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-255723	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-256108	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	113695	-	TSC_hg19_v1_chr2_+_43864411 BC063310	154960	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	154986	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.0	
chr3	140473182	140473290	reg1035249.p1	3.559	+	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	-76277	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-818984	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-819218	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	187531	+	TSC_hg19_v1_chr3_+_140770412 BC051354	297242	+	AF403029 BC008324 NM_080862 AK056367	297521	+	NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AF403029|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##BC008324|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##NM_080862|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4##AK056367|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.0	
chr3	176656708	176656889	reg1013175.p1	3.559	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	-2079708	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	-2498078	+	BC032555 NM_014932	-3540555	+	TSC_hg19_v1_chr3_-_176914267 BX648935	257452	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	258153	-	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	258261	-	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.0	
chr3	181666239	181666318	reg1034653.p1	3.559	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-236140	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-236565	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-248886	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	845009	+	AK296750 TSC_hg19_v1_chr3_+_182511291	845017	+	TSC_hg19_v1_chr3_+_182511375 AF156548	845111	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.0	
chr3	38180294	38180406	reg1036174.p2	3.559	+	NM_001172566 NM_001172567 NM_001172568 NM_001172569 NM_002468 TSC_hg19_v1_chr3_+_38180156 AK296716 U84408 BX537602 AK298650 AK300448 AK296570 AK298666 AB463903 AK300051 BC013589 AL832906 AB446470 AK304676 BT007376	-266	+	TSC_hg19_v1_chr3_-_38178584 AK316551 AK301056 BC039837 BC000635 NM_001130410 NM_001607	-1694	-	TSC_hg19_v1_chr3_-_38178570 BC025780	-1778	-	TSC_hg19_v1_chr3_+_38206993 AB017642 NM_005109 BC008726	26691	+	TSC_hg19_v1_chr3_+_38207137 AK309634	26795	+	TSC_hg19_v1_chr3_+_38207257 AB029024 AB384561 CU679061 DQ893255 DQ896584	26956	+	NM_001172566|MYD88|4615|myeloid differentiation primary response gene (88)##NM_001172567|MYD88|4615|myeloid differentiation primary response gene (88)##NM_001172568|MYD88|4615|myeloid differentiation primary response gene (88)##NM_001172569|MYD88|4615|myeloid differentiation primary response gene (88)##NM_002468|MYD88|4615|myeloid differentiation primary response gene (88)##AK296716|MYD88|4615|myeloid differentiation primary response gene (88)##U84408|MYD88|4615|myeloid differentiation primary response gene (88)##BX537602|MYD88|4615|myeloid differentiation primary response gene (88)##AK298650|MYD88|4615|myeloid differentiation primary response gene (88)##AK300448|MYD88|4615|myeloid differentiation primary response gene (88)##AK296570|MYD88|4615|myeloid differentiation primary response gene (88)##AK298666|MYD88|4615|myeloid differentiation primary response gene (88)##AK300051|MYD88|4615|myeloid differentiation primary response gene (88)##BC013589|MYD88|4615|myeloid differentiation primary response gene (88)##AL832906|MYD88|4615|myeloid differentiation primary response gene (88)##AB446470|MYD88|4615|myeloid differentiation primary response gene (88)##AK304676|MYD88|4615|myeloid differentiation primary response gene (88)##BT007376|MYD88|4615|myeloid differentiation primary response gene (88)##AK316551|ACAA1|30|acetyl-CoA acyltransferase 1##AK301056|ACAA1|30|acetyl-CoA acyltransferase 1##BC039837|ACAA1|30|acetyl-CoA acyltransferase 1##BC000635|ACAA1|30|acetyl-CoA acyltransferase 1##NM_001130410|ACAA1|30|acetyl-CoA acyltransferase 1##NM_001607|ACAA1|30|acetyl-CoA acyltransferase 1##BC025780|ACAA1|30|acetyl-CoA acyltransferase 1##AB017642|OXSR1|9943|oxidative-stress responsive 1##NM_005109|OXSR1|9943|oxidative-stress responsive 1##BC008726|OXSR1|9943|oxidative-stress responsive 1##AK309634|OXSR1|9943|oxidative-stress responsive 1##AB029024|OXSR1|9943|oxidative-stress responsive 1##DQ893255|OXSR1|9943|oxidative-stress responsive 1##DQ896584|OXSR1|9943|oxidative-stress responsive 1	0.0	
chr5	66500075	66500142	reg1035063.p2	3.559	+	BC109069 BC109070 D83597 NM_005582 AK313177	-7508	-	AY830839 BC018692 NM_015183	-375505	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-607900	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	1011472	+	TSC_hg19_v1_chr5_+_67511602 BC094795	1011499	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	1084186	+	BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.023381	
chr7	152890291	152890370	reg1039170.p2	3.559	+	TSC_hg19_v1_chr7_+_152456872 NM_001040135 NM_020445 AK315534 BC008682 AK294292 AK316078 AF086920 BC015207 AF023453 CU677239 CU679037 DQ894754 EU176295	-433437	+	AB590731 CU692064 TSC_hg19_v1_chr7_-_152373227 BC042137 AK313607 Y08837 AF035587 NM_005431	-517122	-	TSC_hg19_v1_chr7_+_152161285 BC036622	-729091	+	TSC_hg19_v1_chr7_+_153584383 BX647966 NM_001039350	694070	+	TSC_hg19_v1_chr7_+_153749746 M96859 NM_130797	859428	+	AK309760 AK308993 AK293582 NM_001936 TSC_hg19_v1_chr7_+_154002377 M96860 AK294483 AB384749	1112055	+	NM_001040135|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##NM_020445|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK315534|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC008682|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK294292|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK316078|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF086920|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC015207|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF023453|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##DQ894754|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##EU176295|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC042137|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AK313607|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##Y08837|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AF035587|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##NM_005431|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##BC036622|LOC100128822|100128822|uncharacterized LOC100128822##BX647966|DPP6|1804|dipeptidyl-peptidase 6##NM_001039350|DPP6|1804|dipeptidyl-peptidase 6##M96859|DPP6|1804|dipeptidyl-peptidase 6##NM_130797|DPP6|1804|dipeptidyl-peptidase 6##AK309760|DPP6|1804|dipeptidyl-peptidase 6##AK308993|DPP6|1804|dipeptidyl-peptidase 6##AK293582|DPP6|1804|dipeptidyl-peptidase 6##NM_001936|DPP6|1804|dipeptidyl-peptidase 6##M96860|DPP6|1804|dipeptidyl-peptidase 6##AK294483|DPP6|1804|dipeptidyl-peptidase 6	0.511351	CTCF.p2:-5:0.511
chr10	113083469	113083558	reg1032842.p2	3.558	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	-246661	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-404133	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-404153	+	AB046780 TSC_hg19_v1_chr10_-_113933602	850048	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	859992	-	BC113497 BC113499 AF312827 HQ258194 NM_058222	959939	+	NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC113497|TECTB|6975|tectorin beta##BC113499|TECTB|6975|tectorin beta##AF312827|TECTB|6975|tectorin beta##HQ258194|TECTB|6975|tectorin beta##NM_058222|TECTB|6975|tectorin beta	0.133222	
chr10	120195	120298	reg1022931.p2	3.558	+	BC101270 BC101271 NM_177987	-25073	-	None	None	None	None	None	None	NM_006624 NM_001202465 NM_001202466 NM_212479 TSC_hg19_v1_chr10_+_180423	60167	+	TSC_hg19_v1_chr10_+_181412 BC091489 NM_001202464	61174	+	BC012586 X86098 NM_001202467 NM_001202468 AB385196 DQ335452 DQ335453 DQ335454 DQ335455 AK296427	105700	+	BC101270|TUBB8|347688|tubulin, beta 8 class VIII##BC101271|TUBB8|347688|tubulin, beta 8 class VIII##NM_177987|TUBB8|347688|tubulin, beta 8 class VIII##NM_006624|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202465|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202466|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_212479|ZMYND11|10771|zinc finger, MYND-type containing 11##BC091489|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202464|ZMYND11|10771|zinc finger, MYND-type containing 11##BC012586|ZMYND11|10771|zinc finger, MYND-type containing 11##X86098|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202467|ZMYND11|10771|zinc finger, MYND-type containing 11##NM_001202468|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335452|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335453|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335454|ZMYND11|10771|zinc finger, MYND-type containing 11##DQ335455|ZMYND11|10771|zinc finger, MYND-type containing 11##AK296427|ZMYND11|10771|zinc finger, MYND-type containing 11	0.299382	
chr10	47004368	47004469	reg1037303.p1	3.558	+	BC011672 NM_014696	-10873	+	TSC_hg19_v1_chr10_-_46970597 AK131036 AK293632 NM_031912 NM_181519	-33818	-	BC139914 AK290186 TSC_hg19_v1_chr10_-_46970538	-33908	-	AY649985 AY649986 NM_005972	79115	+	AB590156 CU687256 DQ893430 DQ896775 M81844 AK296573 AK300139 AK300158 BC021910 BC004376 NM_001098845 AK296976 Z36830 BC073755 NM_001040084 AK298761	169601	-	BC146955 BC146968 BC146972 BC146989 BC146990 BC146991 BC147022 BC147026 BC171871 NM_001137548 NM_001137549 NM_001137556	177266	-	BC011672|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##NM_014696|GPRIN2|9721|G protein regulated inducer of neurite outgrowth 2##AK131036|SYT15|83849|synaptotagmin XV##AK293632|SYT15|83849|synaptotagmin XV##NM_031912|SYT15|83849|synaptotagmin XV##NM_181519|SYT15|83849|synaptotagmin XV##BC139914|SYT15|83849|synaptotagmin XV##AK290186|SYT15|83849|synaptotagmin XV##AY649985|PPYR1|5540|pancreatic polypeptide receptor 1##AY649986|PPYR1|5540|pancreatic polypeptide receptor 1##NM_005972|PPYR1|5540|pancreatic polypeptide receptor 1##DQ893430|ANXA8L2|244|annexin A8-like 2##DQ896775|ANXA8|653145|annexin A8##M81844|ANXA8|653145|annexin A8##AK296573|ANXA8|653145|annexin A8##AK300139|ANXA8|653145|annexin A8##AK300158|ANXA8|653145|annexin A8##BC004376|ANXA8|653145|annexin A8##NM_001098845|ANXA8L1|728113|annexin A8-like 1##Z36830|ANXA8|653145|annexin A8##BC073755|ANXA8|653145|annexin A8##NM_001040084|ANXA8|653145|annexin A8##AK298761|ANXA8|653145|annexin A8##BC146955|FAM25C|644054|family with sequence similarity 25, member C##BC146968|FAM25C|644054|family with sequence similarity 25, member C##BC146972|FAM25C|644054|family with sequence similarity 25, member C##BC146989|FAM25C|644054|family with sequence similarity 25, member C##BC146990|FAM25C|644054|family with sequence similarity 25, member C##BC146991|FAM25C|644054|family with sequence similarity 25, member C##BC147022|FAM25C|644054|family with sequence similarity 25, member C##BC147026|FAM25C|644054|family with sequence similarity 25, member C##BC171871|FAM25C|644054|family with sequence similarity 25, member C##NM_001137548|FAM25C|644054|family with sequence similarity 25, member C##NM_001137549|FAM25G|100133093|family with sequence similarity 25, member G##NM_001137556|FAM25B|100132929|family with sequence similarity 25, member B	0.732394	CTCF.p2:-14:0.732
chr13	100568587	100568754	reg1001214.p1	3.558	+	TSC_hg19_v1_chr13_+_100258943 NM_206808 AK300510 BC034360 AK095506 AF428253 CU689862	-309750	+	BC041830 TSC_hg19_v1_chr13_+_100229390	-339293	+	TSC_hg19_v1_chr13_+_100153777 BC130293	-414888	+	AF378304 NM_033132	55499	-	TSC_hg19_v1_chr13_+_100633453 AK298232	64785	+	TSC_hg19_v1_chr13_+_100634037 NM_007129	65350	+	NM_206808|CLYBL|171425|citrate lyase beta like##AK300510|CLYBL|171425|citrate lyase beta like##BC034360|CLYBL|171425|citrate lyase beta like##AK095506|CLYBL|171425|citrate lyase beta like##AF428253|CLYBL|171425|citrate lyase beta like##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2##AF378304|ZIC5|85416|Zic family member 5##NM_033132|ZIC5|85416|Zic family member 5##NM_007129|ZIC2|7546|Zic family member 2	0.0	
chr14	106775107	106775227	reg1030050.p2	3.558	+	AJ305231 DQ118259 HM774835 DQ926094 AY866678 EU794438 Z80845 BC087841 TSC_hg19_v1_chr14_-_106774560	-732	-	AY393053 S85238 TSC_hg19_v1_chr14_-_106746153	-29062	-	AM279487 AF308557 Y17783 Y17784 HM774660 JN111012 AF103142 AY515002 HQ704054 JN110499 JN110977 JN111085 HM774129 HM774274 HM774585 HM774849 HQ704055 U21254 Y17140 AY050689 AY050700 AY392847 AY392855 AY393130 AY393134 AY393349 AY393375 AY393380 AY393622 AY393638 AY393642 AY393655 AY393684 AY393690 AY866668 DQ100948 AY393127 AF533986 AY866766 DQ926392 GU570247 AY866814 DQ100974 DQ926235 DQ926301 FJ039787 JN158459 AY944709 DQ535390 BC090939 AF062249 AF062286 AJ224083 GU179345 BC089421 BC066642 TSC_hg19_v1_chr14_-_106733637	-41651	-	U32154 AF460767 DQ524080 DQ454738 Y08403 HM774396 AF103161 AJ245070 AY866645 AM233757 AY670731 DQ005273 AB063909 AB363132 AJ556745 AY670715 AY670719 AY670726 AY670727 AY670745 AY670770 AY670773 AY670784 AY670819 AY670831 AY670837 AY670857 AY671081 AY671102 AY671324 AY671379 AY671400 AY671500 AY671586 AY671639 AY671641 AY671703 AY671775 AY671785 AY781815 AY781827 AY866636 DQ065711 DQ926028 DQ926188 DQ926206 FJ492934 AJ430733 EF178114 FJ385294 HM152518 AY392953 L28053 AY671012 AY671034 AY671045 AY671152 AY671174 AY671714 AY671721 L03677 Z75396 Z75404 L23570 BC073765 AK130813 AK301332 AK130585 AK128579 AK128568 AK129620 TSC_hg19_v1_chr14_-_106781004	5603	-	U64504 Z14180 DQ454781 M18509 AF460668 AF460673 AF460675 AF460688 AF460707 AF460760 AF460782 AF460788 DQ454502 DQ100920 EF566906 DQ454582 DQ523854 DQ100716 DQ454403 DQ454402 DQ454906 DQ523890 AY003793 BX640623 DQ454507 DQ454695 DQ454742 DQ523911 EU099159 GQ232763 GQ232780 GQ232864 GQ232888 GU552761 GU552780 DQ454405 DQ454406 DQ454589 AY003801 AY003839 DQ454419 DQ454490 DQ454706 DQ454907 GQ232854 GQ232856 GQ232911 GQ232924 GU552697 AY003712 AY003723 DQ454398 DQ454639 DQ454719 DQ454820 DQ454904 DQ454921 DQ454987 DQ523878 DQ523898 GU552703 AY003789 DQ454393 DQ454414 DQ454460 DQ454473 DQ454496 DQ454497 DQ454503 DQ454590 DQ454624 DQ454678 DQ454694 DQ454845 DQ454864 DQ454869 DQ454974 DQ523914 DQ523916 GU552705 GU552738 GU552768 GU552776 AY003776 AY003811 AY998717 AY003831 DQ454394 DQ454395 DQ454400 DQ454407 DQ454412 DQ454474 DQ454499 DQ454506 DQ454604 DQ454666 DQ454734 DQ454823 DQ454835 DQ454934 DQ454976 DQ455003 DQ455006 DQ523851 DQ523859 DQ523899 AY003735 DQ454597 DQ454844 FJ874077 EF175416 AF004938 DQ454716 DQ523876 FJ840036 FJ840067 FJ840079 FJ840129 FJ840148 FJ840231 FJ840268 FJ873887 FJ873897 FJ873904 FJ873915 FJ873930 FJ873932 FJ873948 FJ873956 FJ873969 FJ873988 FJ873989 FJ874009 FJ874019 FJ874024 FJ874052 FJ874057 FJ874073 AJ008230 AY003803 DQ454836 EF407824 AF103200 AJ487485 EU433876 EU814968 FJ694879 AF103305 FJ694880 DQ524171 EF091915 EF091916 EF175387 EF175401 EF175415 EU350419 EU667605 EU814961 JF810266 JF810269 EF407832 AF103085 AY003859 AY003864 DQ100848 EU090243 EU099132 EU099242 EU099251 EU099260 EU099118 EU099097 EU099122 HQ392876 DQ524166 DQ524169 EU099073 EU099134 EU099139 EU099217 EU099229 EU099240 EU099265 EU099284 AF343360 EU099291 EU099226 AJ002393 AF103298 AF103364 AF103074 AF103080 HM214899 AF103059 TSC_hg19_v1_chr14_-_106791270 AF103084 AF103157 AF103220 AF103317 AF103318 AF103365 U00579 AF103357 HM774788 AF103068 AY062326 AY180387 JN110656 JN110735 JN110757 JN110843 JN110854 L03815 L03823 L03826 L03827 L03828 L03829 L04339 L04346 S49240 FJ385359 FJ385425 GQ504925 HM774036 HM774067 HM774092 HM774095 HM774162 HM774174 HM774347 HM774351 HM774398 HM774443 HM774457 HM774465 HM774539 HM774563 HM774565 HM774593 HM774616 HM774641 HM774647 HM774679 HM774792 HM774794 HM774813 HM774842 HM774881 HM774913 HM774944 HM774955 HM775040 HQ703997 HQ704043 HQ704044 FJ385327 HM774124 AF103044 AF103063 AF103097 AF103138 AF103296 AF103368 HM774710 AF082197 AF103267 EF624221 EU146340 EU146376 DQ100926 AB608263 AF029330 AF485477 AJ233695 AJ233700 AJ233703 AJ233708 AJ300790 AJ300797 AM259131 AM259137 AY960863 DQ100942 L03139 U50344 AF485445 AY062325 AY960870 AF092502 AF485421 AJ132851 AJ300795 AY847516 FJ492935 HM995018 L03163 L38560 HM996250 HM996014 AY423179 AY423181 AY423182 AY423200 X75021 AF035795 AJ245225 AJ245227 AJ245263 AJ245272 DQ431474 DQ431477 DQ431481 DQ431496 DQ431498 DQ431500 DQ431502 DQ431503 DQ431504 DQ431581 DQ431599 DQ431629 DQ431635 DQ431649 DQ431652 HM995402 HM995022 HM996475 DQ109964 DQ109966 AF035021 AF062287 AF062288 AF062302 AJ308462 AJ389191 AY640480 AY941849 AY941855 AY941909 AY941928 AY941961 AY941971 AY941981 AY941984 DQ100679 DQ100699 DQ100757 DQ100938 DQ187599 DQ187600 DQ187608 DQ187648 DQ187710 DQ431659 DQ454487 DQ454488 DQ490738 DQ490740 DQ523943 DQ524050 DQ524136 DQ524162 HM994893 HM994896 HM994917 HM994919 HM994947 HM994954 HM994984 HM994985 HM994986 HM995021 HM995023 HM995024 HM995029 HM995030 HM995032 HM995051 HM995074 HM995075 HM995077 HM995078 HM995079 HM995080 HM995116 HM995119 HM995166 HM995250 HM995337 HM995342 HM995343 HM995344 HM995362 HM995364 HM995394 HM995399 HM995400 HM995404 HM995410 HM995426 HM995432 HM995464 HM995465 HM995469 HM995493 HM995494 HM995497 HM995537 HM995540 HM995567 HM995572 HM995574 HM995576 HM995702 HM995745 HM995951 HM995965 HM995979 HM996084 HM996100 HM996110 HM996139 HM996205 HM996210 HM996212 HM996221 HM996240 HM996242 HM996249 HM996252 HM996260 HM996262 HM996271 HM996418 HM996551 AJ245221 AY640576 DQ187667 DQ187669 DQ187670 DQ187671 DQ187674 DQ187676 DQ187705 DQ187732 DQ187733 DQ322735 DQ322736 DQ322737 DQ322749 DQ322750 DQ322753 DQ322754 DQ322765 DQ322766 DQ322767 DQ322778 DQ322779 DQ322780 DQ322781 DQ322782 DQ322796 DQ322798 DQ322824 DQ322826 DQ322827 DQ322870 DQ322871 DQ322872 DQ322873 DQ322875 DQ322876 DQ322882 DQ322883 DQ322884 DQ322891 DQ322893 DQ322942 DQ322943 DQ322944 DQ322945 DQ322946 DQ322947 DQ322951 DQ322954 DQ322981 DQ323006 DQ323028 DQ840661 DQ840662 DQ840664 DQ840665 DQ840666 DQ840667 DQ840669 DQ840670 DQ840672 DQ840673 DQ840684 DQ840685 DQ840686 DQ840688 DQ840689 DQ840694 DQ840695 DQ840697 DQ840699 DQ840700 DQ840701 DQ840717 DQ840719 DQ840726 DQ840728 DQ840730 DQ840732 DQ840735 DQ840740 DQ840741 DQ840742 DQ840772 DQ840776 DQ840777 DQ840778 DQ840780 DQ840804 DQ840807 DQ840810 DQ840818 DQ840819 DQ840821 DQ840826 DQ840829 DQ840831 DQ840833 DQ840838 DQ840843 DQ840865 DQ840866 DQ840868 DQ840870 DQ840871 DQ840873 DQ840874 DQ840878 DQ840879 DQ840882 DQ840883 DQ840886 DQ840889 DQ840891 DQ840892 DQ840893 DQ840899 DQ840900 DQ840906 DQ840907 DQ840909 DQ840911 DQ840912 DQ840913 DQ840914 DQ840915 DQ840916 DQ840919 DQ840920 AB012909 AB063658 AB063660 AB063698 AB063713 AB063792 AB063798 AB063805 AB063808 AB063830 AB063833 AB063839 AB063842 AB063888 AB063889 AB063893 AB063894 AB063913 AB063915 AB066889 AB066895 AB066988 AB067003 AB067023 AB067071 AB067097 AB067108 AB067236 AB067238 AB067239 AB095272 AB355876 AB363091 AB363100 AB363105 AB363110 AB363112 AB363118 AB363123 AB363124 AB363144 AB363147 AB363157 AB373609 AB373615 AB373618 AB373631 AB373635 AB374184 AB374186 AF035024 AF035030 AF044419 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EF178010 EF178073 EF178090 EF178124 EU169674 EU549731 EU794421 FJ195515 FJ385278 FJ385287 FJ385289 FJ385366 FJ481088 FJ492912 GU570325 GU570328 HM047071 Z46771 Z80839 AB021507 AB021508 AB021511 AB021512 AB021513 AB021516 AB021524 AB021531 AB021532 AB021535 AB027433 AB027441 AB030639 AB063789 AB063790 AB063793 AB063802 AB063813 AB063815 AB063900 AB063901 AB084083 AF021942 AF021960 AF021971 AF062116 AF107235 AF115111 AF115121 AF115125 AF115126 AF115127 AF123353 AF123362 AF174093 AF174116 AF174121 AF212993 AF471391 AF471392 AF471394 AF471403 AF471420 AF471424 AF471425 AF471427 AF471428 AF471432 AF471433 AF471435 AF471436 AF471437 AF471438 AF471441 AF471445 AF471446 AF471448 AF471450 AF471457 AJ233701 AJ233705 AJ233707 AJ239331 AJ239332 AJ239336 AJ239349 AJ239361 AJ245258 AJ245265 AJ245268 AJ245270 AJ245273 AJ245274 AJ245275 AJ245276 AJ245280 AJ245282 AJ245286 AJ245287 AJ245288 AJ245289 AJ245290 AJ245291 AJ245292 AJ245293 AJ245301 AJ245302 AJ245303 AJ245304 AJ245306 AJ245307 AJ245308 AJ245309 AJ245315 AJ245316 AJ245342 AJ245347 AJ245350 AJ245351 AJ245357 AJ245358 AJ249376 AJ389171 AJ413996 AJ413997 AJ414012 AJ491904 AJ491905 AJ508768 AJ555253 AJ556715 AJ579099 AJ579110 AJ579114 AJ579139 AJ579144 AJ579145 AJ579146 AJ579147 AJ579148 AJ579151 AJ579152 AJ579154 AJ579158 AJ579193 AJ579194 AJ579199 AJ579220 AJ579230 AJ579276 AJ579279 AJ579284 AJ617572 AJ617575 AJ627229 AJ627230 AJ627232 AJ627235 AJ627239 AJ627243 AJ627244 AJ627245 AM279604 AY033241 AY345918 AY345922 AY543586 AY640536 AY781813 AY781816 AY781879 AY781880 AY781883 AY866854 AY882579 AY927661 AY941847 AY941848 AY941861 AY941864 AY941867 AY941869 AY941871 AY941872 AY941874 AY941875 AY941893 AY941894 AY941895 AY941897 AY941904 AY941908 AY941922 AY941932 AY941933 AY941934 AY941944 AY941946 AY941951 AY941954 AY941956 AY941963 AY941964 AY941966 AY941967 AY941969 AY944690 AY971127 D83678 D83681 D83684 D83685 D83694 DQ005284 DQ065696 DQ100659 DQ100685 DQ100775 DQ100819 DQ100846 DQ100857 DQ100907 DQ100930 DQ212508 DQ212509 DQ431475 DQ431476 DQ431501 DQ431573 DQ431575 DQ431576 DQ431580 DQ431582 DQ431606 DQ431607 DQ431622 DQ431628 DQ431633 DQ431634 DQ431637 DQ431642 DQ431643 DQ431646 DQ431653 DQ431658 DQ535263 DQ535266 DQ535268 DQ535293 DQ535308 DQ535373 DQ535382 DQ535397 DQ535424 DQ535426 DQ535429 DQ535437 DQ535439 DQ535440 DQ535461 DQ535466 DQ840703 DQ840706 DQ840712 DQ840713 DQ840745 DQ840782 DQ840813 DQ923052 DQ926032 DQ926064 DQ926133 DQ926340 DQ926374 DQ926384 DQ926552 EF177969 EF177975 EF177991 EF178015 EF178075 EF178091 EF178098 EF178099 EF221755 EF633749 EF633750 EF633753 EF633754 EF633779 EF633780 EU794440 EU835548 FJ195507 FJ195508 FJ195513 FJ195514 FJ208792 FJ385280 FJ385302 FJ385307 FJ385312 FJ385365 HQ378334 HQ393907 JN234430 JN234435 M85255 S64471 S73507 S80860 U70238 U96391 U96392 X61646 X62961 X62966 X62970 X64238 X72744 X72745 X79169 X79171 X87444 X87459 X87891 X99357 X99358 X99359 Y12720 Y13056 Y15772 Y17139 Z14172 Z18826 Z98730 Z98731 Z98732 Z98733 Z98734 Z98735 Z98736 L03636 AB021514 S73961 HM995878 HM995746 HM995875 HM995879 HQ420175 X69865 M28074 AY392931 AY393061 Z14168 Z14192 L23566 L23568 Z14174 DQ322776 AB159728 AF027159 AF062099 AF062277 AF062281 AY190820 AY190824 AY894992 L03681 L26399 L38427 L38429 M62726 M62728 M62729 M62737 U43757 U43763 X65901 X80305 X81696 X81738 X81745 Z14177 Z80846 CU676522 M81848 Z14204 Z14203 M81847 M34030 M18508 M34026 M34031 M31607 AJ010443 BC019046 CR749861 M18517 BC020240 AK098153 AK093721 AX748278 AK057614 AK097350 AK125633 AK128477 AK128614 AK128658 AK130577 BX538118	16127	-	AF460708 AF460709 AF460785 AY003807 AY003817 DQ454548 M33859 M33860 DQ454427 DQ454852 DQ454425 DQ454627 DQ454856 GU552743 DQ454416 DQ454458 GQ232904 GU552731 GU552736 AY003787 AF017463 GU552721 GU552724 GU552725 GU552726 GU552727 GU552728 GU552729 GU552730 AY003850 DQ454418 DQ454671 GQ232774 DQ454432 DQ454433 DQ454901 DQ454979 DQ454980 GQ232865 HM995239 JF810276 AY003855 DQ454422 DQ454434 DQ454622 DQ454870 DQ523887 HM116153 HM116169 HM116182 Z30552 Z30557 Z30561 Z30562 Z30573 Z30576 Z30578 Z30580 Z30581 Z30591 Z30599 Z30674 Z30675 Z30677 DQ454531 DQ454860 DQ454903 EU099089 AF004937 AY003796 AY003804 DQ454392 DQ454610 DQ454833 EU620002 FJ840008 FJ840011 FJ840012 FJ840020 FJ840055 FJ874002 FJ874054 FJ874065 FJ874072 FJ874075 FJ874095 HM116113 HM116114 HM116155 HM116159 HM116160 HM116168 HM116177 HM116195 HM116199 HM116226 AF017459 AF017460 EU619988 AJ487490 AY003825 AJ253061 EU350428 DQ454982 X75022 EF091922 EF175396 EF175402 EF407849 EF441754 GU358660 JF810277 GQ232847 GQ232867 GQ232891 GQ232893 GQ232895 GQ232896 GQ232900 GQ232901 GQ232902 DQ454645 EU099068 EU099071 AF103299 EU090244 EU099076 EU099098 HQ392881 HQ392885 HQ392917 AJ253080 EU099079 EU099096 EU099156 EU099191 EU099252 AJ253066 AM183974 AM183975 AM183976 AM183977 AM183978 AM183995 AF484411 AF103180 AJ253083 AF103278 EF624236 AJ240558 AJ253067 S79918 AJ253059 AJ253072 AJ253074 AJ253079 AJ253081 AJ253082 AJ253084 AJ253087 AJ253088 AJ253089 AJ253090 AJ253091 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AY671634 AY671637 AY671640 AY671642 AY671644 AY671648 AY671650 AY671651 AY671653 AY671658 AY671659 AY671660 AY671663 AY671668 AY671671 AY671676 AY671682 AY671684 AY671685 AY671688 AY671690 AY671691 AY671694 AY671697 AY671698 AY671699 AY671700 AY671702 AY671704 AY671706 AY671707 AY671708 AY671712 AY671716 AY671718 AY671724 AY671732 AY671733 AY671734 AY671735 AY671737 AY671739 AY671741 AY671746 AY671749 AY671750 AY671751 AY671753 AY671756 AY671763 AY671764 AY671765 AY671766 AY671767 AY671769 AY671771 AY671776 AY671781 AY671784 AY885181 AY941889 AY941914 AY941957 DQ005274 DQ005285 DQ100660 DQ100674 DQ100703 DQ100725 DQ100792 DQ100829 DQ100832 DQ100964 DQ926158 DQ926198 DQ926208 DQ926421 DQ926458 DQ926468 DQ926470 DQ926478 DQ926497 DQ926599 DQ926603 EF544907 EF544958 EF544959 EF544973 FJ208782 FJ492903 FJ492909 FJ492910 GU570373 HM152498 HM152511 HM152516 HQ392880 HQ689741 L12192 L23518 L23934 L25293 M26998 M74468 S64473 S66098 S67110 U00497 U00556 U22391 U71103 U89766 U97246 X56592 X87440 Z35492 Z46269 Z46271 Z46272 Z46273 Z46275 Z46277 Z46279 Z46282 Z46304 Z46305 Z46306 Z46307 Z46308 Z46340 Z46341 Z46342 Z49135 Z49140 Z49141 Z49143 Z70604 Z70605 Z70610 Z70616 Z70617 Z70625 Z70626 Z70627 Z70637 Z70638 Z70639 Z70640 Z70641 Z70642 Z70643 Z70644 Z70650 Z74665 Z74695 AY670806 AY670808 AY957532 AY686937 AY957534 DQ535279 DQ535294 DQ535296 DQ535314 DQ535320 DQ535326 DQ535459 EF178028 EF178136 HM996258 M84508 FJ039792 M84512 X54441 AY671298 AY670999 AY671028 AF283780 AF283781 M74018 M74021 AY670983 AY670985 AY670987 AY670989 AY670992 AY670993 AY670995 AY670997 AY670998 AY671018 AY671025 AY671033 AY671043 AY671307 AY671310 AY671046 AY671049 AY671205 AF283784 AY671151 AY671233 AJ579207 AY670982 AY671003 AY671029 AY671050 AY671156 AY671160 AY671171 AY671177 AY671190 AY671199 AY671201 AY671212 AY671226 AY671232 AY671235 AY671236 AY671250 AY671251 AY671261 AY671262 AY671270 AY671272 AY671278 AY671281 AY671287 AY671308 Z47229 AF062101 AF062146 AF062152 AF062158 AF062173 AF062181 AF062183 AF062187 AF062192 AF062196 AF062217 AF062218 AF062250 AJ579203 AY204755 AY204757 AY204759 AY204761 AY671006 AY671008 AY671061 AY671064 AY671168 AY671175 AY671183 AY671200 AY671207 AY671220 AY671238 AY671258 AY671268 AY671275 AY671289 AY671290 AY671303 AY671305 AY671696 AY671705 AY671713 AY671722 AY671727 AY671728 S59161 X64152 X64153 X65904 Z47228 Z47234 Z47241 Z75362 Z75374 Z75376 Z75379 Z75386 Z75389 Z75392 Z75394 Z75398 CU674902 CU678316 BC002963 BC073767 CU675962 BC017356 BC019235 BC001872 BC006180 BX538126 AK301454 TSC_hg19_v1_chr14_-_106830060 AK126280 AK128649 AK127921 CR933690	54739	-	BC087841|IGHA1|3493|immunoglobulin heavy constant alpha 1##BC090939|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC089421|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##BC066642|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073765|IGHA2|3494|immunoglobulin heavy constant alpha 2 (A2m marker)##AK130813|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK130585|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128568|IGHD|3495|immunoglobulin heavy constant delta##AK129620|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640623|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AF035024|IGHV3-30|28439|immunoglobulin heavy variable 3-30##Y13056|SCFV|652070|single-chain Fv fragment##AY894992|IGHV4-31|28396|immunoglobulin heavy variable 4-31##BC019046|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##CR749861|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##BC020240|IGHM|3507|immunoglobulin heavy constant mu##AK098153|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK093721|IGHA1|3493|immunoglobulin heavy constant alpha 1##AK125633|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AK128614|IGHD|3495|immunoglobulin heavy constant delta##AK128658|IGHD|3495|immunoglobulin heavy constant delta##AK130577|IGHM|3507|immunoglobulin heavy constant mu##BX538118|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##AF174049|SKAP2|8935|src kinase associated phosphoprotein 2##BC002963|IGHM|3507|immunoglobulin heavy constant mu##BC073767|IGHM|3507|immunoglobulin heavy constant mu##BC017356|IGHM|3507|immunoglobulin heavy constant mu##BC019235|IGHM|3507|immunoglobulin heavy constant mu##BC001872|IGHM|3507|immunoglobulin heavy constant mu##BC006180|IGHM|3507|immunoglobulin heavy constant mu##BX538126|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##AK126280|IGHD|3495|immunoglobulin heavy constant delta##AK128649|IGHD|3495|immunoglobulin heavy constant delta##AK127921|IGHA1|3493|immunoglobulin heavy constant alpha 1	0.704539	CTCF.p2:24:0.705
chr16	68298868	68299006	reg1035925.p1	3.558	+	TSC_hg19_v1_chr16_+_68298430 NM_001076785 NM_003983 CR749291 CR749475 AK310866 BC028216	-487	+	AB017494 TSC_hg19_v1_chr16_+_68279299 AY358425 EU832326	-19626	+	AK300596 AK074828 NM_012320 TSC_hg19_v1_chr16_+_68279275 AK296263 AK298494 AL110209 BC062605 AK001705 AK222790	-19687	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	45889	-	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	46022	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	183544	-	NM_001076785|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##NM_003983|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749291|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749475|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK310866|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC028216|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AB017494|PLA2G15|23659|phospholipase A2, group XV##AY358425|PLA2G15|23659|phospholipase A2, group XV##EU832326|PLA2G15|23659|phospholipase A2, group XV##AK300596|PLA2G15|23659|phospholipase A2, group XV##AK074828|PLA2G15|23659|phospholipase A2, group XV##NM_012320|PLA2G15|23659|phospholipase A2, group XV##AK296263|PLA2G15|23659|phospholipase A2, group XV##AK298494|PLA2G15|23659|phospholipase A2, group XV##AL110209|PLA2G15|23659|phospholipase A2, group XV##BC062605|PLA2G15|23659|phospholipase A2, group XV##AK001705|PLA2G15|23659|phospholipase A2, group XV##AK222790|PLA2G15|23659|phospholipase A2, group XV##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)	0.0	
chr18	11689100	11689196	reg1046229.p2	3.558	+	NM_022068	-540388	-	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-1163051	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-1163092	+	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	64	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	62367	+	L10665 TSC_hg19_v1_chr18_+_11752245	63067	+	NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##L10665|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.0	
chr18	56203935	56204053	reg1037970.p1	3.558	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-315144	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-315191	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-315232	+	BX647796 NM_052947	92194	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	134647	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	134734	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.0	
chr19	36632350	36632455	reg1038296.p1	3.558	+	TSC_hg19_v1_chr19_+_36631899 CU680106 BT009775	-217	+	TSC_hg19_v1_chr19_+_36631021 BC000592 BC011903 BC064998 BC017308 AY007141 BC023643 BC021933	-1369	+	BC007779 TSC_hg19_v1_chr19_+_36630999	-1403	+	BC002757 NM_001864	11368	-	BC068453 NM_152477 AK308212	73159	-	NM_001099638 NM_001099639 NM_007145 TSC_hg19_v1_chr19_+_36705624	73172	+	BT009775|CAPNS1|826|calpain, small subunit 1##BC000592|CAPNS1|826|calpain, small subunit 1##BC011903|CAPNS1|826|calpain, small subunit 1##BC064998|CAPNS1|826|calpain, small subunit 1##BC017308|CAPNS1|826|calpain, small subunit 1##AY007141|CAPNS1|826|calpain, small subunit 1##BC023643|CAPNS1|826|calpain, small subunit 1##BC021933|CAPNS1|826|calpain, small subunit 1##BC007779|CAPNS1|826|calpain, small subunit 1##BC002757|COX7A1|1346|cytochrome c oxidase subunit VIIa polypeptide 1 (muscle)##NM_001864|COX7A1|1346|cytochrome c oxidase subunit VIIa polypeptide 1 (muscle)##BC068453|ZNF565|147929|zinc finger protein 565##NM_152477|ZNF565|147929|zinc finger protein 565##AK308212|ZNF565|147929|zinc finger protein 565##NM_001099638|ZNF146|7705|zinc finger protein 146##NM_001099639|ZNF146|7705|zinc finger protein 146##NM_007145|ZNF146|7705|zinc finger protein 146	0.0	
chr2	210660776	210660842	reg1038407.p1	3.558	+	TSC_hg19_v1_chr2_+_210636732 BC136690 BC136693	-24073	+	TSC_hg19_v1_chr2_+_210636707 AK090815 AX746629 NM_032504 NM_182587	-24101	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	-216415	+	TSC_hg19_v1_chr2_+_210867347 BC063135 AK056028 NM_006916	206527	+	BC016764 TSC_hg19_v1_chr2_+_210867366 AK093658 AX748246 AK291035 AK303184 AL833120 AK096199 AK308741 BC072401 BC005148 NM_199229 AB528699 EU831915 EU832009	206561	+	TSC_hg19_v1_chr2_-_211018294 AK074441 BC070141	357532	-	BC136690|UNC80|285175|unc-80 homolog (C. elegans)##BC136693|UNC80|285175|unc-80 homolog (C. elegans)##AK090815|UNC80|285175|unc-80 homolog (C. elegans)##NM_032504|UNC80|285175|unc-80 homolog (C. elegans)##NM_182587|UNC80|285175|unc-80 homolog (C. elegans)##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2##BC063135|RPE|6120|ribulose-5-phosphate-3-epimerase##AK056028|RPE|6120|ribulose-5-phosphate-3-epimerase##NM_006916|RPE|6120|ribulose-5-phosphate-3-epimerase##BC016764|RPE|6120|ribulose-5-phosphate-3-epimerase##AK093658|RPE|6120|ribulose-5-phosphate-3-epimerase##AK291035|RPE|6120|ribulose-5-phosphate-3-epimerase##AK303184|RPE|6120|ribulose-5-phosphate-3-epimerase##AL833120|RPE|6120|ribulose-5-phosphate-3-epimerase##AK096199|RPE|6120|ribulose-5-phosphate-3-epimerase##AK308741|RPE|6120|ribulose-5-phosphate-3-epimerase##BC072401|RPE|6120|ribulose-5-phosphate-3-epimerase##BC005148|RPE|6120|ribulose-5-phosphate-3-epimerase##NM_199229|RPE|6120|ribulose-5-phosphate-3-epimerase##EU831915|RPE|6120|ribulose-5-phosphate-3-epimerase##EU832009|RPE|6120|ribulose-5-phosphate-3-epimerase##AK074441|C2orf67|151050|chromosome 2 open reading frame 67##BC070141|C2orf67|151050|chromosome 2 open reading frame 67	0.167646	
chr3	101532996	101533176	reg1007885.p2	3.558	+	AK289689 NM_001134456	-34801	+	TSC_hg19_v1_chr3_+_101498080 BC009431	-34998	+	NM_145037 TSC_hg19_v1_chr3_+_101498054	-35038	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	13874	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	35288	+	AY090780 NM_175056 BC143817	620781	+	AK289689|FAM55C|91775|family with sequence similarity 55, member C##NM_001134456|FAM55C|91775|family with sequence similarity 55, member C##BC009431|FAM55C|91775|family with sequence similarity 55, member C##NM_145037|FAM55C|91775|family with sequence similarity 55, member C##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1	0.0	
chr3	197386196	197386284	reg1035237.p1	3.558	+	TSC_hg19_v1_chr3_-_197354756 BC067856 AK309924 BC094848 AK299863 BC080518 AK311713	-31487	-	NM_203315 TSC_hg19_v1_chr3_-_197300209	-86039	-	TSC_hg19_v1_chr3_-_197282840 BC011964 BC005844 BC019317 NM_004051 NM_203314	-103398	-	TSC_hg19_v1_chr3_-_197463770 BC033615 NM_014687	77546	-	AK303462 NM_001011537	90183	+	NM_001145642	90327	-	BC067856|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK309924|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC094848|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK299863|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##BC080518|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##AK311713|LOC220729|220729|succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene##NM_203315|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC011964|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC005844|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC019317|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_004051|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##NM_203314|BDH1|622|3-hydroxybutyrate dehydrogenase, type 1##BC033615|KIAA0226|9711|KIAA0226##NM_014687|KIAA0226|9711|KIAA0226##AK303462|FYTTD1|84248|forty-two-three domain containing 1##NM_001011537|FYTTD1|84248|forty-two-three domain containing 1##NM_001145642|KIAA0226|9711|KIAA0226	0.355712	CTCF.p2:11:0.356
chr5	176853066	176853226	reg1029930.p2	3.558	+	TSC_hg19_v1_chr5_-_176836552 AB095845 NM_000505	-16591	-	M11723 M31315 TSC_hg19_v1_chr5_-_176836522	-16641	-	BC012390 TSC_hg19_v1_chr5_-_176831506	-21686	-	TSC_hg19_v1_chr5_+_176853676 NM_001004105 NM_001004106 NM_002082 BC009277 L16862 BC017272 AF040751 AF040752 CU677893 CU679285 AB527614	612	+	BC024233 NM_001174101 NM_030567 TSC_hg19_v1_chr5_+_176873814 BC004261	20673	+	NM_001174102 BC021240	22183	+	AB095845|F12|2161|coagulation factor XII (Hageman factor)##NM_000505|F12|2161|coagulation factor XII (Hageman factor)##M11723|F12|2161|coagulation factor XII (Hageman factor)##M31315|F12|2161|coagulation factor XII (Hageman factor)##BC012390|F12|2161|coagulation factor XII (Hageman factor)##NM_001004105|GRK6|2870|G protein-coupled receptor kinase 6##NM_001004106|GRK6|2870|G protein-coupled receptor kinase 6##NM_002082|GRK6|2870|G protein-coupled receptor kinase 6##BC009277|GRK6|2870|G protein-coupled receptor kinase 6##L16862|GRK6|2870|G protein-coupled receptor kinase 6##BC017272|GRK6|2870|G protein-coupled receptor kinase 6##AF040751|GRK6|2870|G protein-coupled receptor kinase 6##AF040752|GRK6|2870|G protein-coupled receptor kinase 6##BC024233|PRR7|80758|proline rich 7 (synaptic)##NM_001174101|PRR7|80758|proline rich 7 (synaptic)##NM_030567|PRR7|80758|proline rich 7 (synaptic)##BC004261|PRR7|80758|proline rich 7 (synaptic)##NM_001174102|PRR7|80758|proline rich 7 (synaptic)##BC021240|PRR7|80758|proline rich 7 (synaptic)	0.0	
chr6	137592583	137592757	reg1004890.p1	3.558	+	TSC_hg19_v1_chr6_-_137540556 NM_000416	-52112	-	TSC_hg19_v1_chr6_-_137540544 BC005333	-52125	-	TSC_hg19_v1_chr6_-_137540520 EF535103 J03143 AK312674 AK222803	-52158	-	BC051352 AK096362 NM_175747	222855	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	595867	+	TSC_hg19_v1_chr6_-_138189314 AK124173	596680	-	NM_000416|IFNGR1|3459|interferon gamma receptor 1##BC005333|IFNGR1|3459|interferon gamma receptor 1##EF535103|IFNGR1|3459|interferon gamma receptor 1##J03143|IFNGR1|3459|interferon gamma receptor 1##AK312674|IFNGR1|3459|interferon gamma receptor 1##AK222803|IFNGR1|3459|interferon gamma receptor 1##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3	0.0	
chr1	41706022	41706156	reg1039071.p1	3.557	+	BC021252 NM_001172221	-77401	-	BC009752 NM_001031694	-79015	-	AK301497 AK299383 NM_001172222	-80518	-	AK023124 TSC_hg19_v1_chr1_-_41707790 AF149045 AF149046	1696	-	TSC_hg19_v1_chr1_-_41707792 BX640721 NM_001172218 NM_001172219 NM_001172220 NM_012236	1747	-	BC034393 X55177 M65199 NM_001956	244230	-	BC021252|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172221|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK301497|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK299383|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172222|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK023124|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149045|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AF149046|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BX640721|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172218|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172219|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172220|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_012236|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC034393|EDN2|1907|endothelin 2##X55177|EDN2|1907|endothelin 2##M65199|EDN2|1907|endothelin 2##NM_001956|EDN2|1907|endothelin 2	0.106685	
chr14	71757881	71758025	reg1033270.p1	3.557	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-383502	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-383820	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-482144	-	AF090989 AF090990 NM_015556	238088	+	AK294895 NM_001204423	640863	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	641200	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.0	
chr15	49284818	49284926	reg1025783.p1	3.557	+	BC033907 NM_203349	-29232	-	TSC_hg19_v1_chr15_+_49170330 NM_014335 BC114944 BC114946 AK315365 AF092135 AF109873 AF349444 AK098383 AL109701 BC024151 AL357456 BC007944 AB527924 AF274951	-114500	+	BC117182 TSC_hg19_v1_chr15_-_49103277 AB020719 BC069186 AK303805 BX648822 BC107721 NM_001194998 NM_014985	-181610	-	CU689588 AB385300 TSC_hg19_v1_chr15_-_49338644 D87445 AK307480 AK308183 BC008635 BC033001 NM_001193489 NM_014701	53764	-	AF120268 L40388 TSC_hg19_v1_chr15_-_49447811 AB462991 CR542063 CU680378 EU446744 EU831466 EU831553 AK222590 AB209799 AF100762 AF212227 AF084260 BC012629 AK312643 AK295598 NM_001143887 NM_004236	162937	-	TSC_hg19_v1_chr15_+_49447990 AF461816 AL832745 NM_001001556	163119	+	BC033907|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_203349|SHC4|399694|SHC (Src homology 2 domain containing) family, member 4##NM_014335|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC114946|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK315365|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF092135|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF109873|EID1|23741|EP300 interacting inhibitor of differentiation 1##AF349444|EID1|23741|EP300 interacting inhibitor of differentiation 1##AK098383|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL109701|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC024151|EID1|23741|EP300 interacting inhibitor of differentiation 1##AL357456|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC007944|EID1|23741|EP300 interacting inhibitor of differentiation 1##BC117182|CEP152|22995|centrosomal protein 152kDa##AB020719|CEP152|22995|centrosomal protein 152kDa##BC069186|CEP152|22995|centrosomal protein 152kDa##AK303805|CEP152|22995|centrosomal protein 152kDa##BX648822|CEP152|22995|centrosomal protein 152kDa##BC107721|CEP152|22995|centrosomal protein 152kDa##NM_001194998|CEP152|22995|centrosomal protein 152kDa##NM_014985|CEP152|22995|centrosomal protein 152kDa##D87445|SECISBP2L|9728|SECIS binding protein 2-like##AK307480|SECISBP2L|9728|SECIS binding protein 2-like##AK308183|SECISBP2L|9728|SECIS binding protein 2-like##BC008635|SECISBP2L|9728|SECIS binding protein 2-like##BC033001|SECISBP2L|9728|SECIS binding protein 2-like##NM_001193489|SECISBP2L|9728|SECIS binding protein 2-like##NM_014701|SECISBP2L|9728|SECIS binding protein 2-like##AF120268|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##L40388|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##CR542063|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU446744|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831466|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##EU831553|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK222590|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AB209799|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF100762|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF212227|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF084260|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##BC012629|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK312643|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AK295598|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_001143887|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##NM_004236|COPS2|9318|COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis)##AF461816|GALK2|2585|galactokinase 2##AL832745|GALK2|2585|galactokinase 2##NM_001001556|GALK2|2585|galactokinase 2	0.0	
chr16	85603557	85603737	reg1032465.p2	3.557	+	BC093665 BC111944 AK126284 NM_198491	-457593	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-542277	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-558518	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	41374	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	43306	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	118895	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.0	
chr16	88764606	88764745	reg1038804.p1	3.557	+	TSC_hg19_v1_chr16_-_88752882 BC107058 NM_178310	-11784	-	BC041461 AB464228 TSC_hg19_v1_chr16_-_88752874	-11844	-	TSC_hg19_v1_chr16_+_88729781 BC015583 BC050404	-34880	+	AK057106 NM_001171816	5349	-	CU680704 HQ258016 TSC_hg19_v1_chr16_-_88772797 BC013948 AK290920 BC017226 NM_001171815	8093	-	TSC_hg19_v1_chr16_-_88772809 NM_178841	8147	-	BC107058|SNAI3|333929|snail homolog 3 (Drosophila)##NM_178310|SNAI3|333929|snail homolog 3 (Drosophila)##BC041461|SNAI3|333929|snail homolog 3 (Drosophila)##BC015583|MGC23284|197187|uncharacterized LOC197187##BC050404|MGC23284|197187|uncharacterized LOC197187##AK057106|RNF166|115992|ring finger protein 166##NM_001171816|RNF166|115992|ring finger protein 166##HQ258016|RNF166|115992|ring finger protein 166##BC013948|RNF166|115992|ring finger protein 166##AK290920|RNF166|115992|ring finger protein 166##BC017226|RNF166|115992|ring finger protein 166##NM_001171815|RNF166|115992|ring finger protein 166##NM_178841|RNF166|115992|ring finger protein 166	0.997579	CTCF.p2:31:0.998
chr16	89492026	89492179	reg1043773.p1	3.557	+	AK293862 NM_001242885	-104562	+	BC041585 TSC_hg19_v1_chr16_-_89351073	-141146	-	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	-142028	-	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	64829	-	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	82712	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	134963	+	AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC041585|ANKRD11|29123|ankyrin repeat domain 11##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13	0.0	
chr17	75447417	75447545	reg1039348.p1	3.557	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-92	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-699	+	NM_001113496 TSC_hg19_v1_chr17_+_75446637	-836	+	AK056495 NM_001113495	23843	+	TSC_hg19_v1_chr17_+_75543021 AK096234	95539	+	BC039479 NM_001142640 NM_018996	552801	+	AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##NM_001113496|SEPT9|10801|septin 9##AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C	0.0	
chr17_ctg5_hap1	22053	22209	reg1033272.p1	3.557	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr3	109251263	109251353	reg1029674.p1	3.557	+	AK058092 NM_001145553	-122472	+	TSC_hg19_v1_chr3_-_109056388 BC032846 AK290992 NM_018189	-194905	-	DQ891225 DQ894410 AK001575 AK299290 AB528636 AK298623 TSC_hg19_v1_chr3_-_109056370 AK022698	-194955	-	TSC_hg19_v1_chr3_+_110790623 NM_001243286 NM_015480	1539239	+	TSC_hg19_v1_chr3_+_110790671 BC067808	1539393	+	TSC_hg19_v1_chr3_+_110790825 AF282874 AK075105 NM_001243288	1539586	+	AK058092|FLJ25363|401082|uncharacterized LOC401082##NM_001145553|FLJ25363|401082|uncharacterized LOC401082##BC032846|DPPA4|55211|developmental pluripotency associated 4##AK290992|DPPA4|55211|developmental pluripotency associated 4##NM_018189|DPPA4|55211|developmental pluripotency associated 4##DQ891225|DPPA4|55211|developmental pluripotency associated 4##DQ894410|DPPA4|55211|developmental pluripotency associated 4##AK001575|DPPA4|55211|developmental pluripotency associated 4##AK299290|DPPA4|55211|developmental pluripotency associated 4##AK298623|DPPA4|55211|developmental pluripotency associated 4##AK022698|DPPA4|55211|developmental pluripotency associated 4##NM_001243286|PVRL3|25945|poliovirus receptor-related 3##NM_015480|PVRL3|25945|poliovirus receptor-related 3##BC067808|PVRL3|25945|poliovirus receptor-related 3##AF282874|PVRL3|25945|poliovirus receptor-related 3##AK075105|PVRL3|25945|poliovirus receptor-related 3##NM_001243288|PVRL3|25945|poliovirus receptor-related 3	0.357125	CTCF.p2:-21:0.357
chr3	186182378	186182470	reg1040920.p1	3.557	+	BC089411 AB209033 AK314192 D26135 TSC_hg19_v1_chr3_-_186080024 AK304440 NM_001080744 NM_001080745 NM_001346	-102490	-	TSC_hg19_v1_chr3_-_185826879 BC007333 NM_004454	-355568	-	AK301878 TSC_hg19_v1_chr3_-_185826345 X76184	-356078	-	CU686840 AF161703 BC069478 AK314172 NM_017541	79716	-	TSC_hg19_v1_chr3_-_186285118 AK001422 BC025748	102684	-	NM_018138 TSC_hg19_v1_chr3_-_186285140	102717	-	BC089411|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AB209033|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK314192|DGKG|1608|diacylglycerol kinase, gamma 90kDa##D26135|DGKG|1608|diacylglycerol kinase, gamma 90kDa##AK304440|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080744|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001080745|DGKG|1608|diacylglycerol kinase, gamma 90kDa##NM_001346|DGKG|1608|diacylglycerol kinase, gamma 90kDa##BC007333|ETV5|2119|ets variant 5##NM_004454|ETV5|2119|ets variant 5##AK301878|ETV5|2119|ets variant 5##X76184|ETV5|2119|ets variant 5##AF161703|CRYGS|1427|crystallin, gamma S##BC069478|CRYGS|1427|crystallin, gamma S##AK314172|CRYGS|1427|crystallin, gamma S##NM_017541|CRYGS|1427|crystallin, gamma S##AK001422|TBCCD1|55171|TBCC domain containing 1##BC025748|TBCCD1|55171|TBCC domain containing 1##NM_018138|TBCCD1|55171|TBCC domain containing 1	0.147112	
chr7	24882488	24882580	reg1036114.p1	3.557	+	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-84937	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-85195	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	-85467	-	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	137210	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	282343	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	282406	-	NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic	0.0	
chrX	109099002	109099089	reg1029741.p2	3.557	+	TSC_hg19_v1_chrX_-_108976528 AB061713 AK292070 AF030555 NM_004458 NM_022977	-122481	-	TSC_hg19_v1_chrX_-_108976464 Y12777 Y13058 AB061714 BC034959 AK307566 AK294915	-122566	-	DQ891287 DQ894471 DQ896649 DQ896656 DQ896659 DQ896664 EF535525 BC035330 AJ012743 NM_012282 AK223306 AK314923 DQ192294 TSC_hg19_v1_chrX_-_108868398	-230721	-	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	146825	+	TSC_hg19_v1_chrX_+_109246341 NM_032227 AK026332	147295	+	TSC_hg19_v1_chrX_+_109246360 BC085605	147310	+	AB061713|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK292070|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AF030555|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_004458|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_022977|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y12777|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y13058|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061714|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##BC034959|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK307566|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK294915|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##DQ891287|KCNE1L|23630|KCNE1-like##DQ894471|KCNE1L|23630|KCNE1-like##DQ896649|KCNE1L|23630|KCNE1-like##DQ896656|KCNE1L|23630|KCNE1-like##DQ896659|KCNE1L|23630|KCNE1-like##DQ896664|KCNE1L|23630|KCNE1-like##EF535525|KCNE1L|23630|KCNE1-like##BC035330|KCNE1L|23630|KCNE1-like##AJ012743|KCNE1L|23630|KCNE1-like##NM_012282|KCNE1L|23630|KCNE1-like##AK223306|KCNE1L|23630|KCNE1-like##AK314923|KCNE1L|23630|KCNE1-like##DQ192294|KCNE1L|23630|KCNE1-like##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164##NM_032227|TMEM164|84187|transmembrane protein 164##AK026332|TMEM164|84187|transmembrane protein 164##BC085605|TMEM164|84187|transmembrane protein 164	0.0	
chr10	12351034	12351109	reg1037647.p1	3.556	+	TSC_hg19_v1_chr10_+_12238212 BC001600 AK289362 CR456966	-112845	+	TSC_hg19_v1_chr10_+_12238194 BC009598	-112872	+	TSC_hg19_v1_chr10_+_12238186 U27112 AK308790	-112889	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	40504	+	TSC_hg19_v1_chr10_+_12391709 BC035745	40646	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	40706	+	BC001600|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289362|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##CR456966|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##BC009598|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##U27112|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK308790|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID	0.0	
chr14	24716145	24716265	reg1039157.p1	3.556	+	AK315084 AF195512 AK294119 BX161478 TSC_hg19_v1_chr14_-_24711819 AK023166 AK225379 BC019343 BC000710 NM_001099274 NM_012461	-4382	-	CU678872 DQ893390 DQ896711 TSC_hg19_v1_chr14_-_24711567 BC005030	-4606	-	NM_001002002 NM_016576 BC003053 BC008021 BX247993 BC009832	-14075	+	M55183 BC034699 D90287 AK315828 M62925 AK291350 AK299436 AK315843 AK301652 AK315819 NM_000359	16174	-	TSC_hg19_v1_chr14_-_24740390 AK303247	24183	-	TSC_hg19_v1_chr14_+_24740427 AB593166	24232	+	AK315084|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##AF195512|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##AK294119|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##BX161478|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##AK023166|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##AK225379|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##BC019343|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##NM_001099274|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##NM_012461|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##DQ893390|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##DQ896711|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##BC005030|TINF2|26277|TERF1 (TRF1)-interacting nuclear factor 2##NM_001002002|GMPR2|51292|guanosine monophosphate reductase 2##NM_016576|GMPR2|51292|guanosine monophosphate reductase 2##BC003053|GMPR2|51292|guanosine monophosphate reductase 2##BC008021|GMPR2|51292|guanosine monophosphate reductase 2##BX247993|GMPR2|51292|guanosine monophosphate reductase 2##BC009832|GMPR2|51292|guanosine monophosphate reductase 2##M55183|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##BC034699|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##D90287|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK315828|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##M62925|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK291350|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK299436|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK315843|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK301652|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK315819|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##NM_000359|TGM1|7051|transglutaminase 1 (K polypeptide epidermal type I, protein-glutamine-gamma-glutamyltransferase)##AK303247|RABGGTA|5875|Rab geranylgeranyltransferase, alpha subunit	0.0	
chr14	75946797	75946977	reg1037997.p1	3.556	+	BC051303 NM_001135049	-48051	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	-51874	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	-52246	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	41903	+	TSC_hg19_v1_chr14_+_75988840 D42106	41965	+	NM_017791 AY260572 AY260577 BC019087 AK000378	98078	+	BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like##NM_017791|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260572|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AY260577|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##BC019087|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2##AK000378|FLVCR2|55640|feline leukemia virus subgroup C cellular receptor family, member 2	0.0	
chr17	1964568	1964642	reg1030151.p2	3.556	+	DQ187313 NM_001098202	-5048	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-6207	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-19297	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	242207	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	242435	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	242647	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.0	
chr19	36208288	36208468	reg1001380.p3	3.556	+	AF130255 NM_014383	-4549	+	BC107097 BC107098 NM_007000 AF085807	-50662	+	TSC_hg19_v1_chr19_+_36139253 D28426 BC002478 X54473 X13923	-69126	+	TSC_hg19_v1_chr19_+_36208923 AJ007041 NM_014727	552	+	TSC_hg19_v1_chr19_+_36209125 AF186605	808	+	BC126481 BC126483 BC144205 AX775837 AK026226 NM_024660	24952	-	AF130255|ZBTB32|27033|zinc finger and BTB domain containing 32##NM_014383|ZBTB32|27033|zinc finger and BTB domain containing 32##BC107097|UPK1A|11045|uroplakin 1A##BC107098|UPK1A|11045|uroplakin 1A##NM_007000|UPK1A|11045|uroplakin 1A##AF085807|UPK1A|11045|uroplakin 1A##D28426|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##BC002478|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X54473|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##X13923|COX6B1|1340|cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous)##AJ007041|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##NM_014727|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##AF186605|MLL4|9757|myeloid/lymphoid or mixed-lineage leukemia 4##BC126481|IGFLR1|79713|IGF-like family receptor 1##BC126483|IGFLR1|79713|IGF-like family receptor 1##BC144205|IGFLR1|79713|IGF-like family receptor 1##AX775837|IGFLR1|79713|IGF-like family receptor 1##AK026226|IGFLR1|79713|IGF-like family receptor 1##NM_024660|IGFLR1|79713|IGF-like family receptor 1	0.017144	
chr20	343283	343401	reg1036380.p2	3.556	+	TSC_hg19_v1_chr20_+_327754 AK026982	-15593	+	TSC_hg19_v1_chr20_+_327371 NM_024958 AK290527	-15937	+	TSC_hg19_v1_chr20_+_306226 BC067361 NM_006943 U35612 BC028103	-37106	+	AY247738 NM_021158 TSC_hg19_v1_chr20_+_361483 AJ697936 AK026945 AK222837 BC027484	18071	+	TSC_hg19_v1_chr20_+_361708 BC019363	18366	+	AJ697940 TSC_hg19_v1_chr20_+_361938 AK297546 AJ697937 AJ697938 AJ697939	18620	+	AK026982|NRSN2|80023|neurensin 2##NM_024958|NRSN2|80023|neurensin 2##AK290527|NRSN2|80023|neurensin 2##BC067361|SOX12|6666|SRY (sex determining region Y)-box 12##NM_006943|SOX12|6666|SRY (sex determining region Y)-box 12##U35612|SOX12|6666|SRY (sex determining region Y)-box 12##BC028103|SOX12|6666|SRY (sex determining region Y)-box 12##AY247738|TRIB3|57761|tribbles homolog 3 (Drosophila)##NM_021158|TRIB3|57761|tribbles homolog 3 (Drosophila)##AJ697936|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK026945|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK222837|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC027484|TRIB3|57761|tribbles homolog 3 (Drosophila)##BC019363|TRIB3|57761|tribbles homolog 3 (Drosophila)##AK297546|TRIB3|57761|tribbles homolog 3 (Drosophila)	0.078426	
chr22	42177039	42177108	reg1038966.p1	3.556	+	BC025400 NM_152513 BC035720 BC144638	-81561	+	BC035403 NM_001142964 AK131457	-90515	+	AK124020 TSC_hg19_v1_chr22_-_42084824 BC005358 AF155235 NM_001003796	-92208	-	TSC_hg19_v1_chr22_+_42196682 NM_024821 AK026002 AK299311 BC017693 CR456484	19599	+	NM_004599 TSC_hg19_v1_chr22_+_42229105	52032	+	TSC_hg19_v1_chr22_+_42229114 BC051799	52039	+	BC025400|MEI1|150365|meiosis inhibitor 1##NM_152513|MEI1|150365|meiosis inhibitor 1##BC035720|MEI1|150365|meiosis inhibitor 1##BC144638|MEI1|150365|meiosis inhibitor 1##BC035403|C22orf46|79640|chromosome 22 open reading frame 46##NM_001142964|C22orf46|79640|chromosome 22 open reading frame 46##AK131457|C22orf46|79640|chromosome 22 open reading frame 46##BC005358|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##AF155235|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_001003796|NHP2L1|4809|NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)##NM_024821|CCDC134|79879|coiled-coil domain containing 134##AK026002|CCDC134|79879|coiled-coil domain containing 134##AK299311|CCDC134|79879|coiled-coil domain containing 134##BC017693|CCDC134|79879|coiled-coil domain containing 134##CR456484|CCDC134|79879|coiled-coil domain containing 134##NM_004599|SREBF2|6721|sterol regulatory element binding transcription factor 2##BC051799|SREBF2|6721|sterol regulatory element binding transcription factor 2	0.0	
chr22	50977943	50978048	reg1041588.p1	3.556	+	NM_001014440	-6988	-	BC127934 BC127935 TSC_hg19_v1_chr22_-_50970579	-7430	-	TSC_hg19_v1_chr22_-_50968479 NM_001113755 NM_001953	-9499	-	BC009980 NM_138433	8466	+	NM_001123225	23332	-	BC143071 BC150318 D87812 U62733 BC142954 NM_001145137	38429	-	NM_001014440|ODF3B|440836|outer dense fiber of sperm tails 3B##BC127934|ODF3B|440836|outer dense fiber of sperm tails 3B##BC127935|ODF3B|440836|outer dense fiber of sperm tails 3B##NM_001113755|TYMP|1890|thymidine phosphorylase##NM_001953|TYMP|1890|thymidine phosphorylase##BC009980|KLHDC7B|113730|kelch domain containing 7B##NM_138433|KLHDC7B|113730|kelch domain containing 7B##NM_001123225|SYCE3|644186|synaptonemal complex central element protein 3##BC143071|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##BC150318|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##D87812|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##U62733|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##BC142954|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)##NM_001145137|CPT1B|1375|carnitine palmitoyltransferase 1B (muscle)	0.0	
chr3	182110130	182110234	reg1040312.p1	3.556	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	-680044	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	-680469	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	-692790	+	TSC_hg19_v1_chr3_+_182511288 BC042180 NM_014616	401105	+	AK296750 TSC_hg19_v1_chr3_+_182511291	401113	+	TSC_hg19_v1_chr3_+_182511375 AF156548	401207	+	BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##BC042180|ATP11B|23200|ATPase, class VI, type 11B##NM_014616|ATP11B|23200|ATPase, class VI, type 11B##AK296750|ATP11B|23200|ATPase, class VI, type 11B##AF156548|ATP11B|23200|ATPase, class VI, type 11B	0.0	
chr5	108260347	108260430	reg1028652.p2	3.556	+	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	-175716	+	AK293376 J03358 NM_005246 AK296874	-176826	+	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	-196408	-	BC030826 AB007898 TSC_hg19_v1_chr5_-_108745619 AK291759 NM_014819	485233	-	TSC_hg19_v1_chr5_+_109025072 BC031659	764676	+	TSC_hg19_v1_chr5_+_109025096 BC111062	764709	+	AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##AB593118|HP07349|100652853|uncharacterized protein HP07349##BC030826|PJA2|9867|praja ring finger 2##AB007898|PJA2|9867|praja ring finger 2##AK291759|PJA2|9867|praja ring finger 2##NM_014819|PJA2|9867|praja ring finger 2##BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1	0.0	
chr6	148929855	148929970	reg1040519.p1	3.556	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-265721	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-265922	+	AK025495 NM_015278 TSC_hg19_v1_chr6_+_148663793	-266149	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	138297	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	709191	+	AK315038 NM_015093 AK307650	709529	+	AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AK025495|SASH1|23328|SAM and SH3 domain containing 1##NM_015278|SASH1|23328|SAM and SH3 domain containing 1##NM_005715|UST|10090|uronyl-2-sulfotransferase##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2	0.988223	CTCF.p2:-16:0.988
chr6	52861573	52861682	reg1040652.p2	3.556	+	AK315369 TSC_hg19_v1_chr6_-_52860078 AF020918 AF025887 BC096817 NM_001512	-1500	-	AF020919 BC020619 NM_000847	-87150	-	NM_153699	-150735	-	AB023153 BC152464 TSC_hg19_v1_chr6_-_52926579 AF152469 AK074892	64905	-	TSC_hg19_v1_chr6_-_52926623 NM_014920 NM_016513	65008	-	BC000650 NM_033481	68168	+	AK315369|GSTA4|2941|glutathione S-transferase alpha 4##AF020918|GSTA4|2941|glutathione S-transferase alpha 4##AF025887|GSTA4|2941|glutathione S-transferase alpha 4##BC096817|GSTA4|2941|glutathione S-transferase alpha 4##NM_001512|GSTA4|2941|glutathione S-transferase alpha 4##AF020919|GSTA3|2940|glutathione S-transferase alpha 3##BC020619|GSTA3|2940|glutathione S-transferase alpha 3##NM_000847|GSTA3|2940|glutathione S-transferase alpha 3##NM_153699|GSTA5|221357|glutathione S-transferase alpha 5##AB023153|ICK|22858|intestinal cell (MAK-like) kinase##BC152464|ICK|22858|intestinal cell (MAK-like) kinase##AF152469|ICK|22858|intestinal cell (MAK-like) kinase##AK074892|ICK|22858|intestinal cell (MAK-like) kinase##NM_014920|ICK|22858|intestinal cell (MAK-like) kinase##NM_016513|ICK|22858|intestinal cell (MAK-like) kinase##BC000650|FBXO9|26268|F-box protein 9##NM_033481|FBXO9|26268|F-box protein 9	0.0	
chr7	129989990	129990056	reg1027048.p1	3.556	+	NM_001127441 NM_001127442 NM_080385 AK093288 AK315256 AX748034 BC039362 AY155230 BC053681 BC042996 AK131191 AY155229	-5359	+	AK290993 NM_001163446 NM_016352 BC052289 AK310933 AK298553 AK298550 AK299023 AY358699 AF095719 AB590729 CU690898 HQ448429	-57027	+	BC007009 NM_001869 BC014571 BC015140 AK293378 U19977 DQ893811 CU675491 BT007403	-83309	+	NM_001868 AK131054 AK291493 AK293366 BC005279 X67318 CU675077 DQ890565 DQ893728 BT007313	30302	+	BC056162 AK314676 TSC_hg19_v1_chr7_-_130080886 BC018789 AK026098 AJ278890 NM_018718 AK298618 AK311382 AF429308 AF429309	90854	-	TSC_hg19_v1_chr7_+_130126173 AK098397 NM_177524 CR627364 BC090049	136093	+	NM_001127441|CPA5|93979|carboxypeptidase A5##NM_001127442|CPA5|93979|carboxypeptidase A5##NM_080385|CPA5|93979|carboxypeptidase A5##AK093288|CPA5|93979|carboxypeptidase A5##AK315256|CPA5|93979|carboxypeptidase A5##BC039362|CPA5|93979|carboxypeptidase A5##AY155230|CPA5|93979|carboxypeptidase A5##BC053681|CPA5|93979|carboxypeptidase A5##BC042996|CPA5|93979|carboxypeptidase A5##AK131191|CPA5|93979|carboxypeptidase A5##AY155229|CPA5|93979|carboxypeptidase A5##AK290993|CPA4|51200|carboxypeptidase A4##NM_001163446|CPA4|51200|carboxypeptidase A4##NM_016352|CPA4|51200|carboxypeptidase A4##BC052289|CPA4|51200|carboxypeptidase A4##AK310933|CPA4|51200|carboxypeptidase A4##AK298553|CPA4|51200|carboxypeptidase A4##AK298550|CPA4|51200|carboxypeptidase A4##AK299023|CPA4|51200|carboxypeptidase A4##AY358699|CPA4|51200|carboxypeptidase A4##AF095719|CPA4|51200|carboxypeptidase A4##HQ448429|CPA4|51200|carboxypeptidase A4##BC007009|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001869|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC014571|CPA2|1358|carboxypeptidase A2 (pancreatic)##BC015140|CPA2|1358|carboxypeptidase A2 (pancreatic)##AK293378|CPA2|1358|carboxypeptidase A2 (pancreatic)##U19977|CPA2|1358|carboxypeptidase A2 (pancreatic)##DQ893811|CPA2|1358|carboxypeptidase A2 (pancreatic)##BT007403|CPA2|1358|carboxypeptidase A2 (pancreatic)##NM_001868|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK131054|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK291493|CPA1|1357|carboxypeptidase A1 (pancreatic)##AK293366|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC005279|CPA1|1357|carboxypeptidase A1 (pancreatic)##X67318|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ890565|CPA1|1357|carboxypeptidase A1 (pancreatic)##DQ893728|CPA1|1357|carboxypeptidase A1 (pancreatic)##BT007313|CPA1|1357|carboxypeptidase A1 (pancreatic)##BC056162|CEP41|95681|centrosomal protein 41kDa##AK314676|CEP41|95681|centrosomal protein 41kDa##BC018789|CEP41|95681|centrosomal protein 41kDa##AK026098|CEP41|95681|centrosomal protein 41kDa##AJ278890|CEP41|95681|centrosomal protein 41kDa##NM_018718|CEP41|95681|centrosomal protein 41kDa##AK298618|CEP41|95681|centrosomal protein 41kDa##AK311382|CEP41|95681|centrosomal protein 41kDa##AF429308|CEP41|95681|centrosomal protein 41kDa##AF429309|CEP41|95681|centrosomal protein 41kDa##AK098397|MEST|4232|mesoderm specific transcript homolog (mouse)##NM_177524|MEST|4232|mesoderm specific transcript homolog (mouse)##CR627364|MEST|4232|mesoderm specific transcript homolog (mouse)##BC090049|MEST|4232|mesoderm specific transcript homolog (mouse)	0.0	
chr7	75369046	75369166	reg1039135.p1	3.556	+	TSC_hg19_v1_chr7_-_75368305 AF486833 NM_001243198 NM_005338	-796	-	AF365404 AB385224 TSC_hg19_v1_chr7_-_75368255 AK094866 AK304738 BC110545	-866	-	BC101598 BC143635 BC087844 BC022886 BC007683 BC014421 BC029646 TSC_hg19_v1_chr7_-_75157432 BC046153	-211921	-	NM_006072 AY358893	50032	-	AJ223461 BC069072 BC069391 NM_002991 U85768 AB590965 CU686790	73923	-	AF226732 TSC_hg19_v1_chr7_+_75508369 NM_001040456 NM_001040457 BC069017 AK026590	139228	+	AF486833|HIP1|3092|huntingtin interacting protein 1##NM_001243198|HIP1|3092|huntingtin interacting protein 1##NM_005338|HIP1|3092|huntingtin interacting protein 1##AF365404|HIP1|3092|huntingtin interacting protein 1##AK094866|HIP1|3092|huntingtin interacting protein 1##AK304738|HIP1|3092|huntingtin interacting protein 1##BC110545|HIP1|3092|huntingtin interacting protein 1##BC101598|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC143635|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC087844|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC007683|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC014421|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##BC046153|PMS2P3|5387|postmeiotic segregation increased 2 pseudogene 3##NM_006072|CCL26|10344|chemokine (C-C motif) ligand 26##AY358893|CCL26|10344|chemokine (C-C motif) ligand 26##AJ223461|CCL24|6369|chemokine (C-C motif) ligand 24##BC069072|CCL24|6369|chemokine (C-C motif) ligand 24##BC069391|CCL24|6369|chemokine (C-C motif) ligand 24##NM_002991|CCL24|6369|chemokine (C-C motif) ligand 24##U85768|CCL24|6369|chemokine (C-C motif) ligand 24##AF226732|RHBDD2|57414|rhomboid domain containing 2##NM_001040456|RHBDD2|57414|rhomboid domain containing 2##NM_001040457|RHBDD2|57414|rhomboid domain containing 2##BC069017|RHBDD2|57414|rhomboid domain containing 2##AK026590|RHBDD2|57414|rhomboid domain containing 2	0.0	
chrX	122866966	122867048	reg1040025.p1	3.556	+	TSC_hg19_v1_chrX_-_122866897 NM_001081550	-110	-	TSC_hg19_v1_chrX_-_122866885 AK001758	-124	-	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	-548767	+	TSC_hg19_v1_chrX_+_122993844 AK313883 NM_001204401 NM_001167 AK309704 U32974 BC032729	126935	+	TSC_hg19_v1_chrX_+_123094397 NM_001042749 AK098737 BX640970 AK298633 AK313559	227517	+	NM_001042750 NM_001042751 NM_006603 TSC_hg19_v1_chrX_+_123095573 AL831939 BX641002 CR749433 BX641003	228566	+	NM_001081550|THOC2|57187|THO complex 2##AK001758|THOC2|57187|THO complex 2##NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##AK313883|XIAP|331|X-linked inhibitor of apoptosis##NM_001204401|XIAP|331|X-linked inhibitor of apoptosis##NM_001167|XIAP|331|X-linked inhibitor of apoptosis##AK309704|XIAP|331|X-linked inhibitor of apoptosis##U32974|XIAP|331|X-linked inhibitor of apoptosis##BC032729|XIAP|331|X-linked inhibitor of apoptosis##NM_001042749|STAG2|10735|stromal antigen 2##AK098737|STAG2|10735|stromal antigen 2##BX640970|STAG2|10735|stromal antigen 2##AK298633|STAG2|10735|stromal antigen 2##AK313559|STAG2|10735|stromal antigen 2##NM_001042750|STAG2|10735|stromal antigen 2##NM_001042751|STAG2|10735|stromal antigen 2##NM_006603|STAG2|10735|stromal antigen 2##AL831939|STAG2|10735|stromal antigen 2##BX641002|STAG2|10735|stromal antigen 2##CR749433|STAG2|10735|stromal antigen 2##BX641003|STAG2|10735|stromal antigen 2	0.0	
chr1	171050512	171050630	reg1032102.p1	3.555	+	NM_001163629 NM_025063 AK027203 BC113390 BC113392	-145924	+	BC074993 NM_006902 NM_022716 EU446648 AB527492 AB451463 TSC_hg19_v1_chr1_+_170633380 M95929	-417209	+	TSC_hg19_v1_chr1_+_170632302 AK225968	-418281	+	NM_001002294 NM_006894 AK223166 TSC_hg19_v1_chr1_+_171060044 AK298406 Z47552 AK298456 AK296105 AK310785 AK313197 BC032016	9470	+	NM_001460 AK304385 AK312877 BC005894 Y09267 AL833218	103851	+	AK290113 AK315100 M64082 NM_002021 AK296198	167090	+	NM_001163629|C1orf129|80133|chromosome 1 open reading frame 129##NM_025063|C1orf129|80133|chromosome 1 open reading frame 129##AK027203|C1orf129|80133|chromosome 1 open reading frame 129##BC113390|C1orf129|80133|chromosome 1 open reading frame 129##BC113392|C1orf129|80133|chromosome 1 open reading frame 129##BC074993|PRRX1|5396|paired related homeobox 1##NM_006902|PRRX1|5396|paired related homeobox 1##NM_022716|PRRX1|5396|paired related homeobox 1##EU446648|PRRX1|5396|paired related homeobox 1##AB451463|PRRX1|5396|paired related homeobox 1##AK225968|PRRX1|5396|paired related homeobox 1##NM_001002294|FMO3|2328|flavin containing monooxygenase 3##NM_006894|FMO3|2328|flavin containing monooxygenase 3##AK223166|FMO3|2328|flavin containing monooxygenase 3##AK298406|FMO3|2328|flavin containing monooxygenase 3##Z47552|FMO3|2328|flavin containing monooxygenase 3##AK296105|FMO3|2328|flavin containing monooxygenase 3##AK310785|FMO3|2328|flavin containing monooxygenase 3##AK313197|FMO3|2328|flavin containing monooxygenase 3##BC032016|FMO3|2328|flavin containing monooxygenase 3##NM_001460|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK304385|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK312877|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##BC005894|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##Y09267|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AL833218|FMO2|2327|flavin containing monooxygenase 2 (non-functional)##AK290113|FMO1|2326|flavin containing monooxygenase 1##AK315100|FMO1|2326|flavin containing monooxygenase 1##M64082|FMO1|2326|flavin containing monooxygenase 1##NM_002021|FMO1|2326|flavin containing monooxygenase 1##AK296198|FMO1|2326|flavin containing monooxygenase 1	0.992708	CTCF.p2:-12:0.993
chr1	182290851	182290956	reg1033090.p1	3.555	+	BC137223 BC137224 AK128654 NM_001009992	-260106	-	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-838203	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-1233038	+	TSC_hg19_v1_chr1_-_182354649 AK301600	63779	-	TSC_hg19_v1_chr1_-_182357758 BC127883	66860	-	AY486122 S70290 AB528372 DQ893278 DQ896609 EU832658 EU832735 TSC_hg19_v1_chr1_-_182357935	67000	-	BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase##AY486122|GLUL|2752|glutamate-ammonia ligase##S70290|GLUL|2752|glutamate-ammonia ligase##DQ893278|GLUL|2752|glutamate-ammonia ligase##DQ896609|GLUL|2752|glutamate-ammonia ligase##EU832658|GLUL|2752|glutamate-ammonia ligase##EU832735|GLUL|2752|glutamate-ammonia ligase	0.0	
chr12	108323393	108323484	reg1034636.p2	3.555	+	AY238895 NM_203436	-155277	+	TSC_hg19_v1_chr12_-_108154938 BC068562	-168437	-	TSC_hg19_v1_chr12_-_108154913 NM_012406	-168528	-	BC110330 AB018332 NM_014653	200049	+	NM_001142345	391000	-	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	409646	-	AY238895|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##NM_203436|ASCL4|121549|achaete-scute complex homolog 4 (Drosophila)##BC068562|PRDM4|11108|PR domain containing 4##NM_012406|PRDM4|11108|PR domain containing 4##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1	0.0	
chr13	115046732	115046912	reg1020533.p2	3.555	+	TSC_hg19_v1_chr13_+_115000402 AK296424 BC017244 BC010875 AK315302 U18291 AB590520 AF164598 CU677877	-46360	+	TSC_hg19_v1_chr13_+_115000360 NM_001078645 NM_003903	-46463	+	TSC_hg19_v1_chr13_-_114898084 BC047242 BC038456 NM_007368	-148719	-	TSC_hg19_v1_chr13_+_115047085 AY013250 NM_023011 NM_080687 BC023569 BC047735 AK294545 AK302003 AF318575	292	+	TSC_hg19_v1_chr13_+_115080005 NM_001164144 NM_001164145 NM_032436 AK096346 BC065237	33164	+	None	None	None	AK296424|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC017244|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC010875|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AK315302|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##U18291|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##AF164598|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##NM_001078645|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##NM_003903|CDC16|8881|cell division cycle 16 homolog (S. cerevisiae)##BC047242|RASA3|22821|RAS p21 protein activator 3##BC038456|RASA3|22821|RAS p21 protein activator 3##NM_007368|RASA3|22821|RAS p21 protein activator 3##AY013250|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_023011|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_080687|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC023569|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##BC047735|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK294545|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AK302003|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##AF318575|UPF3A|65110|UPF3 regulator of nonsense transcripts homolog A (yeast)##NM_001164144|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##NM_001164145|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##NM_032436|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##AK096346|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1##BC065237|CHAMP1|283489|chromosome alignment maintaining phosphoprotein 1	0.0	
chr16	17498299	17498393	reg1030073.p2	3.555	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-1171816	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1171858	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-1171864	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	66459	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1075045	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1299750	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr20	10459641	10459821	reg1046295.p2	3.555	+	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-43755	+	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	-44892	-	AF221993 NM_018848	-47162	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	194473	-	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	194838	-	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1411718	+	BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3	0.36323	CTCF.p2:49:0.363
chr20	11360316	11360439	reg1031503.p1	3.555	+	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	-705808	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	-706173	-	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-944401	+	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	511072	+	AK316256 TSC_hg19_v1_chr20_+_11898540 NM_014962 AB023169 BC109315 BC109316	538180	+	TSC_hg19_v1_chr20_+_12989619 BC005205 NM_018327 BC150644	1629264	+	BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3##AK316256|BTBD3|22903|BTB (POZ) domain containing 3##NM_014962|BTBD3|22903|BTB (POZ) domain containing 3##AB023169|BTBD3|22903|BTB (POZ) domain containing 3##BC109315|BTBD3|22903|BTB (POZ) domain containing 3##BC109316|BTBD3|22903|BTB (POZ) domain containing 3##BC005205|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##NM_018327|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3##BC150644|SPTLC3|55304|serine palmitoyltransferase, long chain base subunit 3	0.0	
chr2	4810827	4810932	reg1041315.p2	3.555	+	AK302299 NM_018436 BC029652	-1105082	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-1168310	+	X74803 TSC_hg19_v1_chr2_+_3627765	-1183134	+	U23752 AB028641 NM_003108 BC025789 AB464713	1021936	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	2195021	-	TSC_hg19_v1_chr2_-_7006650 AK308509	2195824	-	AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##X74803|RPS7|6201|ribosomal protein S7##U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	0.311325	CTCF.p2:8:0.311
chr6	40742822	40742922	reg1038770.p2	3.555	+	BC142616 AB033072 NM_020737 AK291474	-187728	-	TSC_hg19_v1_chr6_-_39902202 AK300300 AF034374 AK091306 AK056740 NM_001075098	-840658	-	AB527188 AJ224328 NM_005943	-847487	-	BC035284 NM_173561 TSC_hg19_v1_chr6_-_41006954	264077	-	NM_001010873 BC104440 BC104441 BC137560 BC137565 BC144710 NM_001159726	267474	+	AK223461 AK308197 AK310006 AK313288 NM_006789 BC047767 AF161698 BC069688 BC069764 AK300689	278127	+	BC142616|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AB033072|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##NM_020737|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK291474|LRFN2|57497|leucine rich repeat and fibronectin type III domain containing 2##AK300300|MOCS1|4337|molybdenum cofactor synthesis 1##AF034374|MOCS1|4337|molybdenum cofactor synthesis 1##AK091306|MOCS1|4337|molybdenum cofactor synthesis 1##AK056740|MOCS1|4337|molybdenum cofactor synthesis 1##NM_001075098|MOCS1|4337|molybdenum cofactor synthesis 1##AJ224328|MOCS1|4337|molybdenum cofactor synthesis 1##NM_005943|MOCS1|4337|molybdenum cofactor synthesis 1##BC035284|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_173561|UNC5CL|222643|unc-5 homolog C (C. elegans)-like##NM_001010873|TSPO2|222642|translocator protein 2##BC104440|TSPO2|222642|translocator protein 2##BC104441|TSPO2|222642|translocator protein 2##BC137560|TSPO2|222642|translocator protein 2##BC137565|TSPO2|222642|translocator protein 2##BC144710|TSPO2|222642|translocator protein 2##NM_001159726|TSPO2|222642|translocator protein 2##AK223461|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK308197|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK310006|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK313288|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##NM_006789|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC047767|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AF161698|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069688|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##BC069764|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2##AK300689|APOBEC2|10930|apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2	0.140479	
chr8	95218406	95218540	reg1035061.p1	3.555	+	NM_001161778 AB590483 TSC_hg19_v1_chr8_+_94930074 AK302651	-288438	+	NM_018444 TSC_hg19_v1_chr8_+_94929171 BC047619 NM_001161780 AK057079 NM_001161779 BC064978 AF155661 NM_001161781	-289293	+	AK308071 NM_001142301 NM_153704 AK092244 AX747428 TSC_hg19_v1_chr8_+_94767121 AK308735 BX648768 BC031220 BC017974 BC054338 AK094935 BC032835	-451359	+	U07969 BC112013 BC113464 TSC_hg19_v1_chr8_-_95220784 X83228 AK301001 NM_004063	2321	-	AK312873 NM_001144663	11057	-	U10550 TSC_hg19_v1_chr8_-_95274525	56049	-	NM_001161778|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK302651|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_018444|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC047619|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161780|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK057079|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161779|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##BC064978|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AF155661|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##NM_001161781|PDP1|54704|pyruvate dehyrogenase phosphatase catalytic subunit 1##AK308071|TMEM67|91147|transmembrane protein 67##NM_001142301|TMEM67|91147|transmembrane protein 67##NM_153704|TMEM67|91147|transmembrane protein 67##AK092244|TMEM67|91147|transmembrane protein 67##AK308735|TMEM67|91147|transmembrane protein 67##BX648768|TMEM67|91147|transmembrane protein 67##BC031220|TMEM67|91147|transmembrane protein 67##BC017974|TMEM67|91147|transmembrane protein 67##BC054338|TMEM67|91147|transmembrane protein 67##AK094935|TMEM67|91147|transmembrane protein 67##BC032835|TMEM67|91147|transmembrane protein 67##U07969|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC112013|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##BC113464|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##X83228|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK301001|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_004063|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##AK312873|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##NM_001144663|CDH17|1015|cadherin 17, LI cadherin (liver-intestine)##U10550|GEM|2669|GTP binding protein overexpressed in skeletal muscle	0.0	
chr9	114783042	114783223	reg1039900.p2	3.555	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-123665	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-124018	+	AL833535 NM_173521	-237357	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	154388	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	312155	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	312717	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chr10	89621763	89621862	reg1023556.p2	3.554	+	TSC_hg19_v1_chr10_-_89577921 AK075223 NM_032810	-43910	-	TSC_hg19_v1_chr10_+_89419623 NM_001015880 NM_004670 BC009894 AK312556 AF091242 AF150754 AF074331 AF173365 DQ893625 DQ895430 AF313907	-202267	+	AK309176 NM_001178118	-354223	+	EU552092 NM_001126049	1381	-	TSC_hg19_v1_chr10_+_89623357 NM_000314 U92436	1414	+	TSC_hg19_v1_chr10_+_89623380 BC005821	1577	+	AK075223|ATAD1|84896|ATPase family, AAA domain containing 1##NM_032810|ATAD1|84896|ATPase family, AAA domain containing 1##NM_001015880|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##NM_004670|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##BC009894|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK312556|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF091242|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF150754|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF074331|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF173365|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ893625|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##DQ895430|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AF313907|PAPSS2|9060|3'-phosphoadenosine 5'-phosphosulfate synthase 2##AK309176|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##NM_001178118|MINPP1|9562|multiple inositol-polyphosphate phosphatase 1##EU552092|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_001126049|KLLN|100144748|killin, p53-regulated DNA replication inhibitor##NM_000314|PTEN|5728|phosphatase and tensin homolog##U92436|PTEN|5728|phosphatase and tensin homolog##BC005821|PTEN|5728|phosphatase and tensin homolog	0.0	
chr11	66384163	66384235	reg1030987.p2	3.554	+	NM_001198836 NM_001198837 NM_001198845 NM_001198846 NM_006328 TSC_hg19_v1_chr11_+_66384100 AF315632 AF315633 EU287938 AK222830 AK297907 AK307254 AK021768 AK292805 AF080561 BC000488 BC023619 DQ294957 EU287939 EU446504	-78	+	TSC_hg19_v1_chr11_+_66360672 AY113179 AF002210 NM_005125 BC105016 BC112055 CR541928	-23501	+	CU689898 TSC_hg19_v1_chr11_-_66360516 AK001648 BC034469 NM_018219	-23678	-	AB464693 TSC_hg19_v1_chr11_+_66395849	11592	+	NM_001198843 NM_001198844 NM_002896 TSC_hg19_v1_chr11_+_66406176 AK303984 BC021120 AK225071 BC032735	21934	+	BC000307 BC064960 TSC_hg19_v1_chr11_+_66406199 U89505	21996	+	NM_001198836|RBM14|10432|RNA binding motif protein 14##NM_001198837|RBM14|10432|RNA binding motif protein 14##NM_001198845|RBM14-RBM4|100526737|RBM14-RBM4 readthrough##NM_001198846|RBM14-RBM4|100526737|RBM14-RBM4 readthrough##NM_006328|RBM14|10432|RNA binding motif protein 14##AF315632|RBM14|10432|RNA binding motif protein 14##AF315633|RBM14|10432|RNA binding motif protein 14##AK222830|RBM14|10432|RNA binding motif protein 14##AK021768|RBM14|10432|RNA binding motif protein 14##AF080561|RBM14|10432|RNA binding motif protein 14##BC000488|RBM14|10432|RNA binding motif protein 14##BC023619|RBM14|10432|RNA binding motif protein 14##DQ294957|RBM14|10432|RNA binding motif protein 14##EU446504|RBM14|10432|RNA binding motif protein 14##AY113179|CCS|9973|copper chaperone for superoxide dismutase##AF002210|CCS|9973|copper chaperone for superoxide dismutase##NM_005125|CCS|9973|copper chaperone for superoxide dismutase##BC105016|CCS|9973|copper chaperone for superoxide dismutase##BC112055|CCS|9973|copper chaperone for superoxide dismutase##CR541928|CCS|9973|copper chaperone for superoxide dismutase##AK001648|CCDC87|55231|coiled-coil domain containing 87##BC034469|CCDC87|55231|coiled-coil domain containing 87##NM_018219|CCDC87|55231|coiled-coil domain containing 87##NM_001198843|RBM4|5936|RNA binding motif protein 4##NM_001198844|RBM4|5936|RNA binding motif protein 4##NM_002896|RBM4|5936|RNA binding motif protein 4##AK303984|RBM4|5936|RNA binding motif protein 4##BC021120|RBM4|5936|RNA binding motif protein 4##AK225071|RBM4|5936|RNA binding motif protein 4##BC032735|RBM4|5936|RNA binding motif protein 4##BC000307|RBM4|5936|RNA binding motif protein 4##BC064960|RBM4|5936|RNA binding motif protein 4##U89505|RBM4|5936|RNA binding motif protein 4	0.0	
chr12	11802054	11802171	reg1035468.p2	3.554	+	BC044827 NM_006248	-253621	-	BC044827 K03205 K03206 BC141917 K03204 NM_005039 NM_199353 NM_199354 AX772842	-293596	-	BC130386 BC035362 K03207 NM_002723 BC128191	-338752	-	TSC_hg19_v1_chr12_+_11802659 AK289441	561	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	662	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	874	+	BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_006248|PRB2|653247|proline-rich protein BstNI subfamily 2##BC044827|PRB1|5542|proline-rich protein BstNI subfamily 1##K03205|PRB1|5542|proline-rich protein BstNI subfamily 1##K03206|PRB1|5542|proline-rich protein BstNI subfamily 1##BC141917|PRB1|5542|proline-rich protein BstNI subfamily 1##K03204|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_005039|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199353|PRB1|5542|proline-rich protein BstNI subfamily 1##NM_199354|PRB1|5542|proline-rich protein BstNI subfamily 1##BC130386|PRB4|5545|proline-rich protein BstNI subfamily 4##BC035362|PRB4|5545|proline-rich protein BstNI subfamily 4##K03207|PRB4|5545|proline-rich protein BstNI subfamily 4##NM_002723|PRB4|5545|proline-rich protein BstNI subfamily 4##BC128191|PRB4|5545|proline-rich protein BstNI subfamily 4##AK289441|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6	0.0	
chr12	132111368	132111523	reg1034823.p1	3.554	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-672992	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-754734	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-754820	+	TSC_hg19_v1_chr12_+_132195623 BC142980	84168	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	84211	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	201521	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.0	
chr14	77875695	77875794	reg1039618.p2	3.554	+	BC104834 BC104836 AK093282 NM_001010860	-31993	+	AY598329 NM_213601 TSC_hg19_v1_chr14_-_77843438 AK095650 BC101510	-32318	-	NM_001513	-88039	+	CU688228 BC066965 AK057371 NM_001113475	13570	-	TSC_hg19_v1_chr14_-_77923916 BC015054 AK297388 AK022925 AK022769 AK222706 AK298354 AK098254 NM_001193314 NM_001193315 NM_001193316 NM_001193317 NM_022067	48191	-	TSC_hg19_v1_chr14_+_77924412 NM_012111 AK300766 AJ243310	48646	+	BC104834|SAMD15|161394|sterile alpha motif domain containing 15##BC104836|SAMD15|161394|sterile alpha motif domain containing 15##AK093282|SAMD15|161394|sterile alpha motif domain containing 15##NM_001010860|SAMD15|161394|sterile alpha motif domain containing 15##AY598329|TMED8|283578|transmembrane emp24 protein transport domain containing 8##NM_213601|TMED8|283578|transmembrane emp24 protein transport domain containing 8##AK095650|TMED8|283578|transmembrane emp24 protein transport domain containing 8##BC101510|TMED8|283578|transmembrane emp24 protein transport domain containing 8##NM_001513|GSTZ1|2954|glutathione transferase zeta 1##BC066965|NOXRED1|122945|NADP-dependent oxidoreductase domain containing 1##AK057371|NOXRED1|122945|NADP-dependent oxidoreductase domain containing 1##NM_001113475|NOXRED1|122945|NADP-dependent oxidoreductase domain containing 1##BC015054|C14orf133|63894|chromosome 14 open reading frame 133##AK297388|C14orf133|63894|chromosome 14 open reading frame 133##AK022925|C14orf133|63894|chromosome 14 open reading frame 133##AK022769|C14orf133|63894|chromosome 14 open reading frame 133##AK222706|C14orf133|63894|chromosome 14 open reading frame 133##AK298354|C14orf133|63894|chromosome 14 open reading frame 133##AK098254|C14orf133|63894|chromosome 14 open reading frame 133##NM_001193314|C14orf133|63894|chromosome 14 open reading frame 133##NM_001193315|C14orf133|63894|chromosome 14 open reading frame 133##NM_001193316|C14orf133|63894|chromosome 14 open reading frame 133##NM_001193317|C14orf133|63894|chromosome 14 open reading frame 133##NM_022067|C14orf133|63894|chromosome 14 open reading frame 133##NM_012111|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##AK300766|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)##AJ243310|AHSA1|10598|AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)	0.820539	CTCF.p2:2:0.821
chr15	31296495	31296617	reg1029549.p1	3.554	+	AK000320 AB528758 AM392869 TSC_hg19_v1_chr15_-_31283808 BC094750 BC063296 NM_017762	-12789	-	CR936734 CR936727 TSC_hg19_v1_chr15_+_31196114 AB023235	-100439	+	BC047882 NM_001146095 NM_001146094 NM_001146096 NM_014967 TSC_hg19_v1_chr15_+_31196088 BX647391 AK290987	-100482	+	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	97361	-	GQ502181 HM135791 NM_001252020	156872	-	NM_001243538	226493	-	AK000320|MTMR10|54893|myotubularin related protein 10##AM392869|MTMR10|54893|myotubularin related protein 10##BC094750|MTMR10|54893|myotubularin related protein 10##BC063296|MTMR10|54893|myotubularin related protein 10##NM_017762|MTMR10|54893|myotubularin related protein 10##CR936734|FAN1|22909|FANCD2/FANCI-associated nuclease 1##CR936727|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AB023235|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BC047882|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146095|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146094|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_001146096|FAN1|22909|FANCD2/FANCI-associated nuclease 1##NM_014967|FAN1|22909|FANCD2/FANCI-associated nuclease 1##BX647391|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AK290987|FAN1|22909|FANCD2/FANCI-associated nuclease 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001243538|LOC283710|283710|uncharacterized LOC283710	0.0	
chr16	10390924	10391031	reg1044359.p1	3.554	+	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	-114300	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	-114789	-	BC143273 U09002 NM_001134408	-115144	-	AK093414 AX748112 TSC_hg19_v1_chr16_+_10479917 AK296565 AK299040 BC033891 BC041882	88940	+	NM_024997 BC137079 BC144468	131763	+	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	283513	-	NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK093414|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK296565|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK299040|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC033891|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##NM_024997|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC137079|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##BC144468|ATF7IP2|80063|activating transcription factor 7 interacting protein 2##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2	0.0	
chr16	13530929	13531080	reg1028638.p2	3.554	+	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	-535536	+	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	-633285	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	-633353	-	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	483027	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	634082	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	749514	+	AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##AK093577|MKL2|57496|MKL/myocardin-like 2	0.0	
chr19	39108566	39108746	reg1035886.p1	3.554	+	AB527182 TSC_hg19_v1_chr19_-_39108593 NM_001042600 NM_007181	-68	-	TSC_hg19_v1_chr19_+_38924330 NM_000540 NM_001042723 J05200	-184312	+	AF448437 BC146669 BC150202 BC142721 BC151216 TSC_hg19_v1_chr19_-_38916860 AX721071 AY048119 AY048120 AY048121 FJ768677 FJ768678 FJ768679 FJ768680 FJ768681 FJ768682 NM_001146202 NM_001146203 NM_001146204 NM_001146205 NM_001146206 NM_001146207 NM_170604	-191784	-	TSC_hg19_v1_chr19_+_39109725 NM_013234 AF077051 AF085358 AB019392 AY245432	1057	+	TSC_hg19_v1_chr19_+_39109825 BC007559 AK298635	1160	+	TSC_hg19_v1_chr19_+_39109833 AK316344 AK301035 AK289554	1182	+	NM_001042600|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_007181|MAP4K1|11184|mitogen-activated protein kinase kinase kinase kinase 1##NM_000540|RYR1|6261|ryanodine receptor 1 (skeletal)##NM_001042723|RYR1|6261|ryanodine receptor 1 (skeletal)##J05200|RYR1|6261|ryanodine receptor 1 (skeletal)##AF448437|RASGRP4|115727|RAS guanyl releasing protein 4##BC146669|RASGRP4|115727|RAS guanyl releasing protein 4##BC150202|RASGRP4|115727|RAS guanyl releasing protein 4##BC142721|RASGRP4|115727|RAS guanyl releasing protein 4##BC151216|RASGRP4|115727|RAS guanyl releasing protein 4##AY048119|RASGRP4|115727|RAS guanyl releasing protein 4##AY048120|RASGRP4|115727|RAS guanyl releasing protein 4##AY048121|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768677|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768678|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768679|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768680|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768681|RASGRP4|115727|RAS guanyl releasing protein 4##FJ768682|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146202|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146203|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146204|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146205|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146206|RASGRP4|115727|RAS guanyl releasing protein 4##NM_001146207|RASGRP4|115727|RAS guanyl releasing protein 4##NM_170604|RASGRP4|115727|RAS guanyl releasing protein 4##NM_013234|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF077051|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AF085358|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AB019392|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AY245432|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##BC007559|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK298635|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK316344|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK301035|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K##AK289554|EIF3K|27335|eukaryotic translation initiation factor 3, subunit K	0.0	
chr19	49005780	49005932	reg1036668.p2	3.554	+	TSC_hg19_v1_chr19_+_48972625 AB209573 BC038713 AK292405 U70728 AK299590 BC004361 AB528907 DQ892565 DQ896856 X99753	-33187	+	NM_004228 NM_017457 TSC_hg19_v1_chr19_+_48972572	-33338	+	BC035918 NM_170720	-41351	+	AB384647 TSC_hg19_v1_chr19_-_49014849	8984	-	AB067470 NM_001080434	10575	-	TSC_hg19_v1_chr19_+_49055432 NM_177973 U92315 BC034694 CU689942	49608	+	AB209573|CYTH2|9266|cytohesin 2##BC038713|CYTH2|9266|cytohesin 2##AK292405|CYTH2|9266|cytohesin 2##U70728|CYTH2|9266|cytohesin 2##AK299590|CYTH2|9266|cytohesin 2##BC004361|CYTH2|9266|cytohesin 2##DQ892565|CYTH2|9266|cytohesin 2##DQ896856|CYTH2|9266|cytohesin 2##X99753|CYTH2|9266|cytohesin 2##NM_004228|CYTH2|9266|cytohesin 2##NM_017457|CYTH2|9266|cytohesin 2##BC035918|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##NM_170720|KCNJ14|3770|potassium inwardly-rectifying channel, subfamily J, member 14##AB067470|LMTK3|114783|lemur tyrosine kinase 3##NM_001080434|LMTK3|114783|lemur tyrosine kinase 3##NM_177973|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##U92315|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1##BC034694|SULT2B1|6820|sulfotransferase family, cytosolic, 2B, member 1	0.0	
chr20	17632559	17632671	reg1028774.p1	3.554	+	NM_001011546 NM_006870 TSC_hg19_v1_chr20_+_17550756 AK315994 BC009477 AK312645 BX647319 S65738 AK302338	-81876	+	AK316247 BC041483 NM_001161705	-93073	-	AF039655 Y16717 TSC_hg19_v1_chr20_-_17512006 NM_001195	-120623	-	TSC_hg19_v1_chr20_-_17641123 AB287347 AB384598	8521	-	BC128578 BC128577 TSC_hg19_v1_chr20_-_17662793 AF006751	30150	-	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	30268	-	NM_001011546|DSTN|11034|destrin (actin depolymerizing factor)##NM_006870|DSTN|11034|destrin (actin depolymerizing factor)##AK315994|DSTN|11034|destrin (actin depolymerizing factor)##BC009477|DSTN|11034|destrin (actin depolymerizing factor)##AK312645|DSTN|11034|destrin (actin depolymerizing factor)##BX647319|DSTN|11034|destrin (actin depolymerizing factor)##S65738|DSTN|11034|destrin (actin depolymerizing factor)##AK302338|DSTN|11034|destrin (actin depolymerizing factor)##AK316247|BFSP1|631|beaded filament structural protein 1, filensin##BC041483|BFSP1|631|beaded filament structural protein 1, filensin##NM_001161705|BFSP1|631|beaded filament structural protein 1, filensin##AF039655|BFSP1|631|beaded filament structural protein 1, filensin##Y16717|BFSP1|631|beaded filament structural protein 1, filensin##NM_001195|BFSP1|631|beaded filament structural protein 1, filensin##AB287347|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128578|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128577|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AF006751|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)	0.376115	CTCF.p2:7:0.376
chr21	26980934	26981093	reg1009972.p2	3.554	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	-1198	-	TSC_hg19_v1_chr21_+_26934442 AF402776	-46541	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	-1179945	+	NM_021219 TSC_hg19_v1_chr21_+_27011719	30640	+	TSC_hg19_v1_chr21_+_27011769 AK312708 AY077698 AY016009 AX772824 AK294769	30824	+	AY358361 BC017779 TSC_hg19_v1_chr21_+_27012056	31038	+	BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##AK124194|FLJ42200|400860|FLJ42200 protein##NM_021219|JAM2|58494|junctional adhesion molecule 2##AK312708|JAM2|58494|junctional adhesion molecule 2##AY077698|JAM2|58494|junctional adhesion molecule 2##AY016009|JAM2|58494|junctional adhesion molecule 2##AX772824|JAM2|58494|junctional adhesion molecule 2##AK294769|JAM2|58494|junctional adhesion molecule 2##AY358361|JAM2|58494|junctional adhesion molecule 2##BC017779|JAM2|58494|junctional adhesion molecule 2	0.0	
chr22	40329162	40329328	reg1014671.p2	3.554	+	AK303280 AK303657 AK312830 TSC_hg19_v1_chr22_+_40322634 AK303470	-6621	+	TSC_hg19_v1_chr22_+_40297183 AF129476 AF090456 CR456498 Y18051	-31998	+	AY069959 NM_004810 TSC_hg19_v1_chr22_+_40297087 AK303332 AK303512 AF236119 AJ011736 BC025692 AF042380 AF102694	-32121	+	TSC_hg19_v1_chr22_+_40390935 BC031099 NM_138435	61699	+	TSC_hg19_v1_chr22_+_40440774 NM_001024843	111664	+	TSC_hg19_v1_chr22_+_40441403 BC028626	112187	+	AK303280|GRAP2|9402|GRB2-related adaptor protein 2##AK303657|GRAP2|9402|GRB2-related adaptor protein 2##AK312830|GRAP2|9402|GRB2-related adaptor protein 2##AK303470|GRAP2|9402|GRB2-related adaptor protein 2##AF129476|GRAP2|9402|GRB2-related adaptor protein 2##AF090456|GRAP2|9402|GRB2-related adaptor protein 2##CR456498|GRAP2|9402|GRB2-related adaptor protein 2##Y18051|GRAP2|9402|GRB2-related adaptor protein 2##AY069959|GRAP2|9402|GRB2-related adaptor protein 2##NM_004810|GRAP2|9402|GRB2-related adaptor protein 2##AK303332|GRAP2|9402|GRB2-related adaptor protein 2##AK303512|GRAP2|9402|GRB2-related adaptor protein 2##AF236119|GRAP2|9402|GRB2-related adaptor protein 2##AJ011736|GRAP2|9402|GRB2-related adaptor protein 2##BC025692|GRAP2|9402|GRB2-related adaptor protein 2##AF042380|GRAP2|9402|GRB2-related adaptor protein 2##AF102694|GRAP2|9402|GRB2-related adaptor protein 2##BC031099|FAM83F|113828|family with sequence similarity 83, member F##NM_138435|FAM83F|113828|family with sequence similarity 83, member F##NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B##BC028626|TNRC6B|23112|trinucleotide repeat containing 6B	0.0	
chr2	242038801	242038947	reg1034506.p1	3.554	+	NM_001080437	-100620	+	AK056601 NM_001085437	-203302	-	BC125154 BC125155 AK026324 NM_024861 AK096434	-207455	-	TSC_hg19_v1_chr2_-_242041703 BC053533 AK093695 AK291665 AK294192 BX648184 AK131298 AF161359 AK296515 NM_182501	2852	-	TSC_hg19_v1_chr2_-_242088865 D50925 AF387103 BC063585 AK056516 AK302417 BC050565 AK302561 NM_001252119 NM_001252122 NM_001252124 NM_015148	49997	-	AK308015 BC051689 TSC_hg19_v1_chr2_+_242089094	50184	+	NM_001080437|SNED1|25992|sushi, nidogen and EGF-like domains 1##AK056601|C2orf54|79919|chromosome 2 open reading frame 54##NM_001085437|C2orf54|79919|chromosome 2 open reading frame 54##BC125154|C2orf54|79919|chromosome 2 open reading frame 54##BC125155|C2orf54|79919|chromosome 2 open reading frame 54##AK026324|C2orf54|79919|chromosome 2 open reading frame 54##NM_024861|C2orf54|79919|chromosome 2 open reading frame 54##AK096434|C2orf54|79919|chromosome 2 open reading frame 54##BC053533|MTERFD2|130916|MTERF domain containing 2##AK093695|MTERFD2|130916|MTERF domain containing 2##AK291665|MTERFD2|130916|MTERF domain containing 2##AK294192|MTERFD2|130916|MTERF domain containing 2##BX648184|MTERFD2|130916|MTERF domain containing 2##AK131298|MTERFD2|130916|MTERF domain containing 2##AF161359|MTERFD2|130916|MTERF domain containing 2##AK296515|MTERFD2|130916|MTERF domain containing 2##NM_182501|MTERFD2|130916|MTERF domain containing 2##D50925|PASK|23178|PAS domain containing serine/threonine kinase##AF387103|PASK|23178|PAS domain containing serine/threonine kinase##BC063585|PASK|23178|PAS domain containing serine/threonine kinase##AK056516|PASK|23178|PAS domain containing serine/threonine kinase##AK302417|PASK|23178|PAS domain containing serine/threonine kinase##BC050565|PASK|23178|PAS domain containing serine/threonine kinase##AK302561|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252119|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252122|PASK|23178|PAS domain containing serine/threonine kinase##NM_001252124|PASK|23178|PAS domain containing serine/threonine kinase##NM_015148|PASK|23178|PAS domain containing serine/threonine kinase##AK308015|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7##BC051689|PPP1R7|5510|protein phosphatase 1, regulatory subunit 7	0.0	
chr4	71728552	71728619	reg1030890.p1	3.554	+	TSC_hg19_v1_chr4_-_71705615 NM_002092 AK296287	-22948	-	TSC_hg19_v1_chr4_-_71705608 U07231 AK127161 AK090755 AK055499 AK056891 AK095799 AK097055 AK124124 BC040485	-23008	-	AK094806 NM_001098477	-23382	-	NM_001244766 NM_001244767 NM_173468 AK093545 AX748194 TSC_hg19_v1_chr4_+_71768085 AK299481 BC038112 AK313513	39528	+	TSC_hg19_v1_chr4_+_71859320 NM_000788 AK303292 AK313523 BC103764	130722	+	M60527 TSC_hg19_v1_chr4_+_71859434 BC114617 JF806429 BT019941 BT019942 CR536527 CR541876	130886	+	NM_002092|GRSF1|2926|G-rich RNA sequence binding factor 1##AK296287|GRSF1|2926|G-rich RNA sequence binding factor 1##U07231|GRSF1|2926|G-rich RNA sequence binding factor 1##AK127161|GRSF1|2926|G-rich RNA sequence binding factor 1##AK090755|GRSF1|2926|G-rich RNA sequence binding factor 1##AK055499|GRSF1|2926|G-rich RNA sequence binding factor 1##AK056891|GRSF1|2926|G-rich RNA sequence binding factor 1##AK095799|GRSF1|2926|G-rich RNA sequence binding factor 1##AK097055|GRSF1|2926|G-rich RNA sequence binding factor 1##AK124124|GRSF1|2926|G-rich RNA sequence binding factor 1##BC040485|GRSF1|2926|G-rich RNA sequence binding factor 1##AK094806|GRSF1|2926|G-rich RNA sequence binding factor 1##NM_001098477|GRSF1|2926|G-rich RNA sequence binding factor 1##NM_001244766|MOB1B|92597|MOB kinase activator 1B##NM_001244767|MOB1B|92597|MOB kinase activator 1B##NM_173468|MOB1B|92597|MOB kinase activator 1B##AK093545|MOB1B|92597|MOB kinase activator 1B##AK299481|MOB1B|92597|MOB kinase activator 1B##BC038112|MOB1B|92597|MOB kinase activator 1B##AK313513|MOB1B|92597|MOB kinase activator 1B##NM_000788|DCK|1633|deoxycytidine kinase##AK303292|DCK|1633|deoxycytidine kinase##AK313523|DCK|1633|deoxycytidine kinase##BC103764|DCK|1633|deoxycytidine kinase##M60527|DCK|1633|deoxycytidine kinase##BC114617|DCK|1633|deoxycytidine kinase##JF806429|DCK|1633|deoxycytidine kinase##BT019941|DCK|1633|deoxycytidine kinase##BT019942|DCK|1633|deoxycytidine kinase##CR536527|DCK|1633|deoxycytidine kinase##CR541876|DCK|1633|deoxycytidine kinase	0.0	
chr6	42237317	42237434	reg1034536.p1	3.554	+	TSC_hg19_v1_chr6_-_42185603 NM_018141	-51758	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-51775	-	TSC_hg19_v1_chr6_-_42185597 AK316599 BC012560	-51778	-	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	182448	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	294375	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	294402	+	NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##AK316599|MRPS10|55173|mitochondrial ribosomal protein S10##BC012560|MRPS10|55173|mitochondrial ribosomal protein S10##AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.0	
chr9	115181268	115181334	reg1043497.p1	3.554	+	TSC_hg19_v1_chr9_+_115142411 BC095451 CU678670	-38883	+	NM_001195822 NM_032303 AK098721 TSC_hg19_v1_chr9_+_115142387 AY093428 BC004331 AK289929 AK292486 AK313605 AK225946 AK303645 AK301469	-39011	+	TSC_hg19_v1_chr9_-_115095957 NM_001163788 NM_001163790 NM_001244896 NM_001244897 NM_005156	-85328	-	TSC_hg19_v1_chr9_+_115249149 AK096613 NM_133465	67861	+	BC105048 BC113515 BC143372 BC143424 TSC_hg19_v1_chr9_+_115249466	68111	+	TSC_hg19_v1_chr9_+_115336888 AK056181	155629	+	BC095451|HSDL2|84263|hydroxysteroid dehydrogenase like 2##NM_001195822|HSDL2|84263|hydroxysteroid dehydrogenase like 2##NM_032303|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK098721|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AY093428|HSDL2|84263|hydroxysteroid dehydrogenase like 2##BC004331|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK289929|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK292486|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK313605|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK225946|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK303645|HSDL2|84263|hydroxysteroid dehydrogenase like 2##AK301469|HSDL2|84263|hydroxysteroid dehydrogenase like 2##NM_001163788|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001163790|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244896|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244897|PTBP3|9991|polypyrimidine tract binding protein 3##NM_005156|PTBP3|9991|polypyrimidine tract binding protein 3##AK096613|KIAA1958|158405|KIAA1958##NM_133465|KIAA1958|158405|KIAA1958##BC105048|KIAA1958|158405|KIAA1958##BC113515|KIAA1958|158405|KIAA1958##BC143372|KIAA1958|158405|KIAA1958##BC143424|KIAA1958|158405|KIAA1958##AK056181|KIAA1958|158405|KIAA1958	0.0	
chr9	19451783	19451889	reg1037005.p1	3.554	+	AK123581 NM_001010887 TSC_hg19_v1_chr9_+_19409009 BC092487 AY312516	-42833	+	BC013296 BC094826 AB062123 BC071907 BC071908 AK311861 AK291517 BC027620 D28348 TSC_hg19_v1_chr9_-_19380235 NM_001010	-71609	-	TSC_hg19_v1_chr9_-_19378815 BC035447	-72970	-	BC143889 BC069622 AF097366 AF177987 NM_001193288 NM_020344	335115	-	AK312914 BC030550 L13744 TSC_hg19_v1_chr9_-_20622460	1170612	-	AK225957 TSC_hg19_v1_chr9_-_20622494 BC036089 NM_004529 BX649194	1170660	-	AK123581|ACER2|340485|alkaline ceramidase 2##NM_001010887|ACER2|340485|alkaline ceramidase 2##BC092487|ACER2|340485|alkaline ceramidase 2##AY312516|ACER2|340485|alkaline ceramidase 2##BC013296|RPS6|6194|ribosomal protein S6##BC094826|RPS6|6194|ribosomal protein S6##AB062123|RPS6|6194|ribosomal protein S6##BC071907|RPS6|6194|ribosomal protein S6##BC071908|RPS6|6194|ribosomal protein S6##AK311861|RPS6|6194|ribosomal protein S6##AK291517|RPS6|6194|ribosomal protein S6##BC027620|RPS6|6194|ribosomal protein S6##D28348|RPS6|6194|ribosomal protein S6##NM_001010|RPS6|6194|ribosomal protein S6##BC035447|RPS6|6194|ribosomal protein S6##BC143889|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##BC069622|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF097366|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AF177987|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_001193288|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##NM_020344|SLC24A2|25769|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2##AK312914|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC030550|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##L13744|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##AK225957|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BC036089|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##NM_004529|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3##BX649194|MLLT3|4300|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	0.0	
chr11	65133966	65134147	reg1003445.p2	3.553	+	NM_145719	-11775	+	TSC_hg19_v1_chr11_+_65101347 BC014889 AK291944 U94585 AB463002 BT006718 DQ892397 DQ895612	-32705	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	-32772	+	BC036869 BX648573 NM_001077241 NM_182556	16068	-	NM_031904 TSC_hg19_v1_chr11_+_65154083 BC021094	20008	+	TSC_hg19_v1_chr11_+_65154127 AK074850 BC033851 AK056778 BC044658 AK291678 AK304363 BC051695	20055	+	NM_145719|TIGD3|220359|tigger transposable element derived 3##BC014889|DPF2|5977|D4, zinc and double PHD fingers family 2##AK291944|DPF2|5977|D4, zinc and double PHD fingers family 2##U94585|DPF2|5977|D4, zinc and double PHD fingers family 2##BT006718|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ892397|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ895612|DPF2|5977|D4, zinc and double PHD fingers family 2##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2##BC036869|SLC25A45|283130|solute carrier family 25, member 45##BX648573|SLC25A45|283130|solute carrier family 25, member 45##NM_001077241|SLC25A45|283130|solute carrier family 25, member 45##NM_182556|SLC25A45|283130|solute carrier family 25, member 45##NM_031904|FRMD8|83786|FERM domain containing 8##AK074850|FRMD8|83786|FERM domain containing 8##BC033851|FRMD8|83786|FERM domain containing 8##AK056778|FRMD8|83786|FERM domain containing 8##BC044658|FRMD8|83786|FERM domain containing 8##AK291678|FRMD8|83786|FERM domain containing 8##AK304363|FRMD8|83786|FERM domain containing 8##BC051695|FRMD8|83786|FERM domain containing 8	0.0	
chr11	73472428	73472494	reg1041657.p1	3.553	+	BC034996 TSC_hg19_v1_chr11_-_73472120 BC003617 AK309311 AK223551 AK289748 BC096818 AK057157 BC068486 NM_001243718 NM_002869 NM_198896	-314	-	AK301534 NM_001243719	-1325	-	AK290109 NM_001130036	-112727	+	AF161408 TSC_hg19_v1_chr11_+_73498935 AK297746 NM_016055 BC009764 AK309219 AK310005	26465	+	TSC_hg19_v1_chr11_-_73587892 AL359618 AK000434 NM_016565 BC106036	115435	-	BC028677 TSC_hg19_v1_chr11_+_73588043 AK021910 AK222501 NM_025155 AK316394 AK225520 BC045774 BC021541 BC028628 BC006142 CU675271 AF087895	115584	+	BC034996|RAB6A|5870|RAB6A, member RAS oncogene family##BC003617|RAB6A|5870|RAB6A, member RAS oncogene family##AK309311|RAB6A|5870|RAB6A, member RAS oncogene family##AK223551|RAB6A|5870|RAB6A, member RAS oncogene family##AK289748|RAB6A|5870|RAB6A, member RAS oncogene family##BC096818|RAB6A|5870|RAB6A, member RAS oncogene family##AK057157|RAB6A|5870|RAB6A, member RAS oncogene family##BC068486|RAB6A|5870|RAB6A, member RAS oncogene family##NM_001243718|RAB6A|5870|RAB6A, member RAS oncogene family##NM_002869|RAB6A|5870|RAB6A, member RAS oncogene family##NM_198896|RAB6A|5870|RAB6A, member RAS oncogene family##AK301534|RAB6A|5870|RAB6A, member RAS oncogene family##NM_001243719|RAB6A|5870|RAB6A, member RAS oncogene family##AK290109|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##NM_001130036|PLEKHB1|58473|pleckstrin homology domain containing, family B (evectins) member 1##AF161408|MRPL48|51642|mitochondrial ribosomal protein L48##AK297746|MRPL48|51642|mitochondrial ribosomal protein L48##NM_016055|MRPL48|51642|mitochondrial ribosomal protein L48##BC009764|MRPL48|51642|mitochondrial ribosomal protein L48##AK309219|MRPL48|51642|mitochondrial ribosomal protein L48##AK310005|MRPL48|51642|mitochondrial ribosomal protein L48##AL359618|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##AK000434|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##NM_016565|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##BC106036|CHCHD8|51287|coiled-coil-helix-coiled-coil-helix domain containing 8##BC028677|PAAF1|80227|proteasomal ATPase-associated factor 1##AK021910|PAAF1|80227|proteasomal ATPase-associated factor 1##AK222501|PAAF1|80227|proteasomal ATPase-associated factor 1##NM_025155|PAAF1|80227|proteasomal ATPase-associated factor 1##AK316394|PAAF1|80227|proteasomal ATPase-associated factor 1##AK225520|PAAF1|80227|proteasomal ATPase-associated factor 1##BC045774|PAAF1|80227|proteasomal ATPase-associated factor 1##BC021541|PAAF1|80227|proteasomal ATPase-associated factor 1##BC028628|PAAF1|80227|proteasomal ATPase-associated factor 1##BC006142|PAAF1|80227|proteasomal ATPase-associated factor 1##AF087895|PAAF1|80227|proteasomal ATPase-associated factor 1	0.0	
chr1	213133319	213133499	reg1043195.p2	3.553	+	AK302675 TSC_hg19_v1_chr1_+_213124038	-9386	+	TSC_hg19_v1_chr1_+_213123945 AK290973 NM_001136474 NM_001136475 NM_024749 AK022567 AK096605 BC053836 BC051856 BC028194	-9492	+	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	-101729	+	TSC_hg19_v1_chr1_-_213188830 AK299208	55402	-	TSC_hg19_v1_chr1_-_213189125 AK294479 AK311276 AK299365 BC047469 AK295116 AF510741 AL079275 NM_144567	55718	-	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	91178	+	AK302675|VASH2|79805|vasohibin 2##AK290973|VASH2|79805|vasohibin 2##NM_001136474|VASH2|79805|vasohibin 2##NM_001136475|VASH2|79805|vasohibin 2##NM_024749|VASH2|79805|vasohibin 2##AK022567|VASH2|79805|vasohibin 2##AK096605|VASH2|79805|vasohibin 2##BC053836|VASH2|79805|vasohibin 2##BC051856|VASH2|79805|vasohibin 2##BC028194|VASH2|79805|vasohibin 2##AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK299208|ANGEL2|90806|angel homolog 2 (Drosophila)##AK294479|ANGEL2|90806|angel homolog 2 (Drosophila)##AK311276|ANGEL2|90806|angel homolog 2 (Drosophila)##AK299365|ANGEL2|90806|angel homolog 2 (Drosophila)##BC047469|ANGEL2|90806|angel homolog 2 (Drosophila)##AK295116|ANGEL2|90806|angel homolog 2 (Drosophila)##AF510741|ANGEL2|90806|angel homolog 2 (Drosophila)##AL079275|ANGEL2|90806|angel homolog 2 (Drosophila)##NM_144567|ANGEL2|90806|angel homolog 2 (Drosophila)##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1	0.0	
chr12	21466560	21466683	reg1032584.p2	3.553	+	BC020696 NM_006446 BC070172 AB026257 BC114376 BC054878 BC105596 AK312970	-182485	+	AF401642 NM_001009562	-297992	+	BC058006 BC105597 NM_019844 BC022843 AK055874 BC070264	-502973	+	NM_021094 AK296044	21211	-	NM_000415 J04422 X14904	59207	+	AF279784 NM_134431	81749	-	BC020696|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##NM_006446|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC070172|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AB026257|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC114376|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC054878|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##BC105596|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AK312970|SLCO1B1|10599|solute carrier organic anion transporter family, member 1B1##AF401642|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)##NM_001009562|SLCO1B7|338821|solute carrier organic anion transporter family, member 1B7 (non-functional)##BC058006|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC105597|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_019844|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC022843|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##AK055874|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##BC070264|SLCO1B3|28234|solute carrier organic anion transporter family, member 1B3##NM_021094|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2##AK296044|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2##NM_000415|IAPP|3375|islet amyloid polypeptide##J04422|IAPP|3375|islet amyloid polypeptide##X14904|IAPP|3375|islet amyloid polypeptide##AF279784|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2##NM_134431|SLCO1A2|6579|solute carrier organic anion transporter family, member 1A2	0.615499	CTCF.p2:-23:0.615
chr1	23991769	23991881	reg1029392.p1	3.553	+	NM_002167 X69111	-105541	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	-105841	-	L22846 NM_004091	-134114	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	26455	+	TSC_hg19_v1_chr1_+_24018295 BC018970	26474	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	78079	+	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11##BC018970|RPL11|6135|ribosomal protein L11##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)	0.0	
chr12	59825471	59825563	reg1034596.p2	3.553	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-511215	-	AY505340 BC126169 BC126171 BC143960 AY358288 NM_153377 TSC_hg19_v1_chr12_-_59314272	-511340	-	AK301162 AY358295 NM_001136051	-512202	-	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	164400	+	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	257622	+	BC050347 NM_178539	2761066	-	AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2	0.0	
chr13	27750779	27750851	reg1039150.p1	3.553	+	TSC_hg19_v1_chr13_-_27746003 BC026072 NM_182488	-4729	-	DQ894074 AF022789 TSC_hg19_v1_chr13_-_27745948 AK289685	-4954	-	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	-415962	-	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	74927	+	AY439004 NM_206827	93648	+	TSC_hg19_v1_chr13_+_27844966 HQ258126	94192	+	BC026072|USP12|219333|ubiquitin specific peptidase 12##NM_182488|USP12|219333|ubiquitin specific peptidase 12##DQ894074|USP12|219333|ubiquitin specific peptidase 12##AF022789|USP12|219333|ubiquitin specific peptidase 12##AK289685|USP12|219333|ubiquitin specific peptidase 12##AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21##AY439004|RASL11A|387496|RAS-like, family 11, member A##NM_206827|RASL11A|387496|RAS-like, family 11, member A##HQ258126|RASL11A|387496|RAS-like, family 11, member A	0.0	
chr14	93043833	93044002	reg1036955.p1	3.553	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-63958	+	NM_153646 AF520704 AF520705 BC069653	-253741	+	AK295059 NM_153647	-254381	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	74719	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	74906	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	171042	-	AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain	0.0	
chr17	29422978	29423103	reg1034810.p1	3.553	+	TSC_hg19_v1_chr17_+_29421994 AK289936 M82814 M89914 BC144643 D42072	-931	+	TSC_hg19_v1_chr17_+_29421944 D12625 NM_000267 NM_001042492 NM_001128147	-1096	+	TSC_hg19_v1_chr17_+_29298062 AK226030 BC082262 AK312979 AK122646 AK122709 AB470605 AY598332	-124900	+	X51694 BC018050 AK222663 AK312445 NM_002544	201274	-	AK312822 TSC_hg19_v1_chr17_-_29641073	218031	-	TSC_hg19_v1_chr17_-_29641092 BC005926	218049	-	AK289936|NF1|4763|neurofibromin 1##M82814|NF1|4763|neurofibromin 1##M89914|NF1|4763|neurofibromin 1##BC144643|NF1|4763|neurofibromin 1##D42072|NF1|4763|neurofibromin 1##D12625|NF1|4763|neurofibromin 1##NM_000267|NF1|4763|neurofibromin 1##NM_001042492|NF1|4763|neurofibromin 1##NM_001128147|NF1|4763|neurofibromin 1##AK226030|RNF135|84282|ring finger protein 135##BC082262|RNF135|84282|ring finger protein 135##AK312979|RNF135|84282|ring finger protein 135##AK122646|RNF135|84282|ring finger protein 135##AK122709|RNF135|84282|ring finger protein 135##AB470605|RNF135|84282|ring finger protein 135##AY598332|RNF135|84282|ring finger protein 135##X51694|OMG|4974|oligodendrocyte myelin glycoprotein##BC018050|OMG|4974|oligodendrocyte myelin glycoprotein##AK222663|OMG|4974|oligodendrocyte myelin glycoprotein##AK312445|OMG|4974|oligodendrocyte myelin glycoprotein##NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein##AK312822|EVI2B|2124|ecotropic viral integration site 2B##BC005926|EVI2B|2124|ecotropic viral integration site 2B	0.0	
chr17	70236712	70236861	reg1037506.p2	3.553	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-119546	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-119616	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-119627	+	AK000477 TSC_hg19_v1_chr17_-_70588944	352157	-	AF331643 TSC_hg19_v1_chr17_-_71088816	852030	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	852037	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.078243	
chr19	11990807	11990914	reg1039326.p2	3.553	+	AL833935 NM_152262	-14017	+	TSC_hg19_v1_chr19_+_11925098 AK095252 NM_152357 BC035760	-65754	+	AK297479 NM_152356 AK096593	-81481	+	TSC_hg19_v1_chr19_+_11998643 BC051309 NM_021915 EU446913	7813	+	TSC_hg19_v1_chr19_+_12035889 AK299182 AK308305 AL136732 NM_144566 BC144406 BC136777	45058	+	AK092240 AK299224 AX747424 NM_001012753 BC105711 BC105712 BC105713	85022	+	AL833935|ZNF439|90594|zinc finger protein 439##NM_152262|ZNF439|90594|zinc finger protein 439##AK095252|ZNF440|126070|zinc finger protein 440##NM_152357|ZNF440|126070|zinc finger protein 440##BC035760|ZNF440|126070|zinc finger protein 440##AK297479|ZNF491|126069|zinc finger protein 491##NM_152356|ZNF491|126069|zinc finger protein 491##AK096593|ZNF491|126069|zinc finger protein 491##BC051309|ZNF69|7620|zinc finger protein 69##NM_021915|ZNF69|7620|zinc finger protein 69##EU446913|ZNF69|7620|zinc finger protein 69##AK299182|ZNF763|284390|zinc finger protein 763##AK308305|ZNF700|90592|zinc finger protein 700##AL136732|ZNF700|90592|zinc finger protein 700##NM_144566|ZNF700|90592|zinc finger protein 700##BC144406|ZNF700|90592|zinc finger protein 700##BC136777|ZNF700|90592|zinc finger protein 700##AK092240|ZNF763|284390|zinc finger protein 763##AK299224|ZNF763|284390|zinc finger protein 763##NM_001012753|ZNF763|284390|zinc finger protein 763##BC105711|ZNF763|284390|zinc finger protein 763##BC105712|ZNF763|284390|zinc finger protein 763##BC105713|ZNF763|284390|zinc finger protein 763	0.997605	CTCF.p2:6:0.998
chr19	49378808	49378889	reg1031485.p2	3.553	+	DQ891855 EU176641 TSC_hg19_v1_chr19_+_49376488 AB464097 CR457259	-2359	+	TSC_hg19_v1_chr19_+_49375698 BC003067 U83981	-3151	+	AK001361 AK225632 AK296668 AK297615 AK298765 AK311366 TSC_hg19_v1_chr19_+_49375677	-3171	+	U82469 BC026070 NM_003323	23118	-	AK292066 NM_006184	24458	+	TSC_hg19_v1_chr19_+_49403601 AK315422 BX647718 AK303126 AK222805 M96824	24736	+	DQ891855|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##EU176641|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##CR457259|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##BC003067|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##U83981|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK001361|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK225632|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK296668|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK297615|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##AK298765|PPP1R15A|23645|protein phosphatase 1, regulatory subunit 15A##U82469|TULP2|7288|tubby like protein 2##BC026070|TULP2|7288|tubby like protein 2##NM_003323|TULP2|7288|tubby like protein 2##AK292066|NUCB1|4924|nucleobindin 1##NM_006184|NUCB1|4924|nucleobindin 1##AK315422|NUCB1|4924|nucleobindin 1##BX647718|NUCB1|4924|nucleobindin 1##AK303126|NUCB1|4924|nucleobindin 1##AK222805|NUCB1|4924|nucleobindin 1##M96824|NUCB1|4924|nucleobindin 1	0.0	
chr2	37509140	37509273	reg1039810.p1	3.553	+	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-50360	+	NM_001083946 NM_144736 TSC_hg19_v1_chr2_+_37458800 AK303555 AK299015 BC065206 BC004548	-50416	+	TSC_hg19_v1_chr2_-_37458740 M37197 AK312322 NM_005760 BC034475	-50478	-	BC030706 BC012820 AB015982 NM_005813	34987	-	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	62607	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	389573	-	BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##NM_001083946|C2orf56|55471|chromosome 2 open reading frame 56##NM_144736|C2orf56|55471|chromosome 2 open reading frame 56##AK303555|C2orf56|55471|chromosome 2 open reading frame 56##AK299015|C2orf56|55471|chromosome 2 open reading frame 56##BC065206|C2orf56|55471|chromosome 2 open reading frame 56##BC004548|C2orf56|55471|chromosome 2 open reading frame 56##M37197|CEBPZ|10153|CCAAT/enhancer binding protein (C/EBP), zeta##AK312322|CEBPZ|10153|CCAAT/enhancer binding protein (C/EBP), zeta##NM_005760|CEBPZ|10153|CCAAT/enhancer binding protein (C/EBP), zeta##BC034475|CEBPZ|10153|CCAAT/enhancer binding protein (C/EBP), zeta##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3	0.997553	CTCF.p2:6:0.998
chr3	111614095	111614188	reg1037502.p1	3.553	+	AL832476 AK092996 AX747845 TSC_hg19_v1_chr3_+_111578690 AB209903	-35467	+	AL832205 TSC_hg19_v1_chr3_+_111578609	-35532	+	TSC_hg19_v1_chr3_+_111578598 NM_001134439 BC038806	-35576	+	NM_018394 TSC_hg19_v1_chr3_+_111697885 AK300018 BC014516 AK093591 AK002204 AB528058 AM392560	83726	+	NM_001008272 NM_013259 AF303058 AF087855 AK315289 TSC_hg19_v1_chr3_+_111717781 BC015329	103566	+	NM_001008273 BC004477 TSC_hg19_v1_chr3_+_111718179 AF112201 BT007408 CU677265	103996	+	AL832476|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AK092996|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AB209903|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##AL832205|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_001134439|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##BC038806|PHLDB2|90102|pleckstrin homology-like domain, family B, member 2##NM_018394|ABHD10|55347|abhydrolase domain containing 10##AK300018|ABHD10|55347|abhydrolase domain containing 10##BC014516|ABHD10|55347|abhydrolase domain containing 10##AK002204|ABHD10|55347|abhydrolase domain containing 10##AM392560|ABHD10|55347|abhydrolase domain containing 10##NM_001008272|TAGLN3|29114|transgelin 3##NM_013259|TAGLN3|29114|transgelin 3##AF303058|TAGLN3|29114|transgelin 3##AF087855|TAGLN3|29114|transgelin 3##AK315289|TAGLN3|29114|transgelin 3##BC015329|TAGLN3|29114|transgelin 3##NM_001008273|TAGLN3|29114|transgelin 3##AF112201|TAGLN3|29114|transgelin 3##BT007408|TAGLN3|29114|transgelin 3	0.39992	CTCF.p2:-20:0.400
chr3	189230101	189230282	reg1022307.p2	3.553	+	AK125682 NM_198485 BC101550 BC101552	-340380	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-565221	+	NM_001167671 BC130584 BC144076	-1286957	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	119068	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	277327	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	608504	-	AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##NM_001167671|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC130584|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC144076|LPP|4026|LIM domain containing preferred translocation partner in lipoma##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1	0.0	
chr4	140822219	140822285	reg1037092.p2	3.553	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	-235118	+	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	-235262	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-344819	-	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	252086	-	NM_018717 TSC_hg19_v1_chr4_-_141075339	253080	-	AK027797 NM_032547	356187	+	AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)##NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)##AK027797|SCOC|60592|short coiled-coil protein##NM_032547|SCOC|60592|short coiled-coil protein	0.0	
chr4	167761253	167761349	reg1034107.p2	3.553	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-966847	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-1461144	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-1512446	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	394310	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	394403	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	394439	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.867389	CTCF.p2:68:0.867
chr5	98363062	98363142	reg1036982.p1	3.553	+	BC054860 BC117134 NM_001270 AF006513	-100874	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-258061	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-1844115	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	1507971	+	AF529367 TSC_hg19_v1_chr5_+_99871306	1508168	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	1875826	-	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.0	
chr6	35700065	35700162	reg1035350.p2	3.553	+	BC042605 NM_001145775	-3754	-	TSC_hg19_v1_chr6_-_35656693 BC111050 AK222807 AK302704 AK303356 AK312422 BX647390 NM_001145776 AF194172 U71321 NM_001145777 NM_004117	-43407	-	TSC_hg19_v1_chr6_-_35656616 HM245391 AB209893	-43493	-	AK058119 BC033033 NM_145028	4745	+	AY358823 NM_207409	44278	+	DQ823638 BC150543 BC150544 BC133046 BC137392 NM_001010886	48712	+	BC042605|FKBP5|2289|FK506 binding protein 5##NM_001145775|FKBP5|2289|FK506 binding protein 5##BC111050|FKBP5|2289|FK506 binding protein 5##AK222807|FKBP5|2289|FK506 binding protein 5##AK302704|FKBP5|2289|FK506 binding protein 5##AK303356|FKBP5|2289|FK506 binding protein 5##AK312422|FKBP5|2289|FK506 binding protein 5##BX647390|FKBP5|2289|FK506 binding protein 5##NM_001145776|FKBP5|2289|FK506 binding protein 5##AF194172|FKBP5|2289|FK506 binding protein 5##U71321|FKBP5|2289|FK506 binding protein 5##NM_001145777|FKBP5|2289|FK506 binding protein 5##NM_004117|FKBP5|2289|FK506 binding protein 5##HM245391|FKBP5|2289|FK506 binding protein 5##AB209893|FKBP5|2289|FK506 binding protein 5##AK058119|C6orf81|221481|chromosome 6 open reading frame 81##BC033033|C6orf81|221481|chromosome 6 open reading frame 81##NM_145028|C6orf81|221481|chromosome 6 open reading frame 81##AY358823|C6orf126|389383|chromosome 6 open reading frame 126##NM_207409|C6orf126|389383|chromosome 6 open reading frame 126##DQ823638|C6orf127|340204|chromosome 6 open reading frame 127##BC150543|C6orf127|340204|chromosome 6 open reading frame 127##BC150544|C6orf127|340204|chromosome 6 open reading frame 127##BC133046|C6orf127|340204|chromosome 6 open reading frame 127##BC137392|C6orf127|340204|chromosome 6 open reading frame 127##NM_001010886|C6orf127|340204|chromosome 6 open reading frame 127	0.0	
chr7	127753021	127753087	reg1046712.p1	3.553	+	BC111561 BC111745 AF196976 AJ297858 NM_022143 AK172751 TSC_hg19_v1_chr7_-_127671066 AK314047	-82018	-	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	-460718	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	-460818	+	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	128279	+	CU680694 TSC_hg19_v1_chr7_-_127983862	230800	-	TSC_hg19_v1_chr7_-_127983944 BC013889 AK222716 AK300500 AK295976 AK001239 NM_001166135 NM_018077	230882	-	BC111561|LRRC4|64101|leucine rich repeat containing 4##BC111745|LRRC4|64101|leucine rich repeat containing 4##AF196976|LRRC4|64101|leucine rich repeat containing 4##AJ297858|LRRC4|64101|leucine rich repeat containing 4##NM_022143|LRRC4|64101|leucine rich repeat containing 4##AK172751|LRRC4|64101|leucine rich repeat containing 4##AK314047|LRRC4|64101|leucine rich repeat containing 4##BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin##BC013889|RBM28|55131|RNA binding motif protein 28##AK222716|RBM28|55131|RNA binding motif protein 28##AK300500|RBM28|55131|RNA binding motif protein 28##AK001239|RBM28|55131|RNA binding motif protein 28##NM_001166135|RBM28|55131|RNA binding motif protein 28##NM_018077|RBM28|55131|RNA binding motif protein 28	0.0	
chr7	74898161	74898243	reg1026863.p1	3.553	+	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	-30682	-	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	-389828	+	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	-408510	-	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	90368	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	126763	+	AK126486 TSC_hg19_v1_chr7_+_75039644 BC044928 BC103750	141452	+	NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC044928|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC103750|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1	0.525986	CTCF.p2:31:0.526
chr9	67794186	67794271	reg1040997.p1	3.553	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-1240953	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-1300032	-	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	-1335732	-	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	132588	+	TSC_hg19_v1_chr9_+_68726468 AK311167	932274	+	TSC_hg19_v1_chr9_+_69065493 AK311167	1271310	+	BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene	0.0	
chrX	133618201	133618345	reg1045597.p1	3.553	+	TSC_hg19_v1_chrX_+_133594303 BC000578 BT019350 CR407645 DQ895107 DQ895109 EU176316 EU176655 L29382 L29383	-23954	+	TSC_hg19_v1_chrX_+_133594225 M31642	-24017	+	TSC_hg19_v1_chrX_+_133594194 NM_000194 AK313435	-24076	+	BC022335 AF234654 BC066327 AK075086 NM_021796	174231	-	AB541014 AB541015 AB528130 AM393279 CU676388 AK125991 TSC_hg19_v1_chrX_-_133930299 AK292517 AL832218 NM_001170756 NM_145284	312036	-	AK307219 NM_001170780	312169	+	BC000578|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##BT019350|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##CR407645|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895107|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895109|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176316|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176655|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29382|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29383|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##M31642|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##NM_000194|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##AK313435|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##BC022335|PLAC1|10761|placenta-specific 1##AF234654|PLAC1|10761|placenta-specific 1##BC066327|PLAC1|10761|placenta-specific 1##AK075086|PLAC1|10761|placenta-specific 1##NM_021796|PLAC1|10761|placenta-specific 1##AB541015|FAM122B|159090|family with sequence similarity 122B##AM393279|FAM122B|159090|family with sequence similarity 122B##AK125991|FAM122B|159090|family with sequence similarity 122B##AK292517|FAM122B|159090|family with sequence similarity 122B##AL832218|FAM122B|159090|family with sequence similarity 122B##NM_001170756|FAM122B|159090|family with sequence similarity 122B##NM_145284|FAM122B|159090|family with sequence similarity 122B##AK307219|FAM122C|159091|family with sequence similarity 122C##NM_001170780|FAM122C|159091|family with sequence similarity 122C	0.997913	CTCF.p2:-2:0.998
chr10	112115379	112115446	reg1039613.p2	3.552	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-50712	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-50819	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-129591	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	142339	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	212080	+	AF067163 TSC_hg19_v1_chr10_+_112344155	228703	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.0	
chr1	151313655	151313753	reg1005449.p2	3.552	+	TSC_hg19_v1_chr1_-_151300176 BC040300 NM_001198774	-13522	-	AK311292 NM_001198773 NM_001198775 NM_002651 TSC_hg19_v1_chr1_-_151300134	-13555	-	TSC_hg19_v1_chr1_-_151299858 BC000029 AK294606	-13854	-	TSC_hg19_v1_chr1_-_151319685 X85786 BC017471	5984	-	TSC_hg19_v1_chr1_-_151319726 AK312289 AK302891 NM_000449 NM_001025603 AK311525	6039	-	AK310044 BC009084 NM_003944 TSC_hg19_v1_chr1_-_151345182 AK303815 AK296661 AK309264 AK315643 AK023875 AK298355 BC032997	31465	-	BC040300|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##NM_001198774|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##AK311292|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##NM_001198773|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##NM_001198775|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##NM_002651|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##BC000029|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##AK294606|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##X85786|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##BC017471|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##AK312289|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##AK302891|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##NM_000449|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##NM_001025603|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##AK311525|RFX5|5993|regulatory factor X, 5 (influences HLA class II expression)##AK310044|SELENBP1|8991|selenium binding protein 1##BC009084|SELENBP1|8991|selenium binding protein 1##NM_003944|SELENBP1|8991|selenium binding protein 1##AK303815|SELENBP1|8991|selenium binding protein 1##AK296661|SELENBP1|8991|selenium binding protein 1##AK309264|SELENBP1|8991|selenium binding protein 1##AK315643|SELENBP1|8991|selenium binding protein 1##AK023875|SELENBP1|8991|selenium binding protein 1##AK298355|SELENBP1|8991|selenium binding protein 1##BC032997|SELENBP1|8991|selenium binding protein 1	0.0	
chr1	160721444	160721563	reg1037905.p2	3.552	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-12439	+	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	-39917	-	AK314244 NM_003037 BC012602	-104440	-	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	44495	+	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	111075	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	133455	-	AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)	0.0	
chr11	65145788	65145968	reg1026471.p1	3.552	+	NM_145719	-23597	+	TSC_hg19_v1_chr11_+_65101347 BC014889 AK291944 U94585 AB463002 BT006718 DQ892397 DQ895612	-44527	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	-44594	+	BC036869 BX648573 NM_001077241 NM_182556	4246	-	NM_031904 TSC_hg19_v1_chr11_+_65154083 BC021094	8186	+	TSC_hg19_v1_chr11_+_65154127 AK074850 BC033851 AK056778 BC044658 AK291678 AK304363 BC051695	8233	+	NM_145719|TIGD3|220359|tigger transposable element derived 3##BC014889|DPF2|5977|D4, zinc and double PHD fingers family 2##AK291944|DPF2|5977|D4, zinc and double PHD fingers family 2##U94585|DPF2|5977|D4, zinc and double PHD fingers family 2##BT006718|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ892397|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ895612|DPF2|5977|D4, zinc and double PHD fingers family 2##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2##BC036869|SLC25A45|283130|solute carrier family 25, member 45##BX648573|SLC25A45|283130|solute carrier family 25, member 45##NM_001077241|SLC25A45|283130|solute carrier family 25, member 45##NM_182556|SLC25A45|283130|solute carrier family 25, member 45##NM_031904|FRMD8|83786|FERM domain containing 8##AK074850|FRMD8|83786|FERM domain containing 8##BC033851|FRMD8|83786|FERM domain containing 8##AK056778|FRMD8|83786|FERM domain containing 8##BC044658|FRMD8|83786|FERM domain containing 8##AK291678|FRMD8|83786|FERM domain containing 8##AK304363|FRMD8|83786|FERM domain containing 8##BC051695|FRMD8|83786|FERM domain containing 8	0.0	
chr1	25262366	25262546	reg1034561.p2	3.552	+	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-5670	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-5717	-	X79550 Z35278 TSC_hg19_v1_chr1_-_25256459	-6031	-	BC013362 AK310945 NM_001031680 AF022726	29086	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	296531	-	BC065040 TSC_hg19_v1_chr1_-_25573922	311467	-	AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##X79550|RUNX3|864|runt-related transcription factor 3##Z35278|RUNX3|864|runt-related transcription factor 3##BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr12	95100132	95100248	reg1036438.p2	3.552	+	EU831778 EU831856 BC040535 NM_020698	-55926	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-246458	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-246548	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	297280	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	297326	-	TSC_hg19_v1_chr12_-_95467392 M29960 M21985 M29959 BC026074 BC040141 AK291319 NM_001032287 NM_001127362 NM_003297	367108	-	EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##M29960|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M21985|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##M29959|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC026074|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##BC040141|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##AK291319|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001032287|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_001127362|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1##NM_003297|NR2C1|7181|nuclear receptor subfamily 2, group C, member 1	0.0	
chr14	105458048	105458131	reg1040390.p1	3.552	+	AK057249 NM_174891 BC137495 BC144671	-5446	+	NM_138420 TSC_hg19_v1_chr14_-_105444718	-13381	-	TSC_hg19_v1_chr14_-_105436817 BC004283 AK094143	-21269	-	TSC_hg19_v1_chr14_-_105487410 AF322239 BC011736 BC025263	29298	-	TSC_hg19_v1_chr14_-_105487413 AK303947	29327	-	TSC_hg19_v1_chr14_-_105487428 NM_017955 NM_145701	29335	-	AK057249|C14orf79|122616|chromosome 14 open reading frame 79##NM_174891|C14orf79|122616|chromosome 14 open reading frame 79##BC137495|C14orf79|122616|chromosome 14 open reading frame 79##BC144671|C14orf79|122616|chromosome 14 open reading frame 79##NM_138420|AHNAK2|113146|AHNAK nucleoprotein 2##BC004283|AHNAK2|113146|AHNAK nucleoprotein 2##AK094143|AHNAK2|113146|AHNAK nucleoprotein 2##AF322239|CDCA4|55038|cell division cycle associated 4##BC011736|CDCA4|55038|cell division cycle associated 4##BC025263|CDCA4|55038|cell division cycle associated 4##AK303947|CDCA4|55038|cell division cycle associated 4##NM_017955|CDCA4|55038|cell division cycle associated 4##NM_145701|CDCA4|55038|cell division cycle associated 4	0.806659	CTCF.p2:-3:0.807
chr14	77466972	77467072	reg1035593.p1	3.552	+	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-174227	+	TSC_hg19_v1_chr14_-_77279257 NM_015305	-187760	-	AB018302 AL137268 TSC_hg19_v1_chr14_-_77279205 AK301069 BC028714	-187812	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	27662	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	28038	-	AK124327 TSC_hg19_v1_chr14_-_77542533	75511	-	AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_015305|ANGEL1|23357|angel homolog 1 (Drosophila)##AB018302|ANGEL1|23357|angel homolog 1 (Drosophila)##AL137268|ANGEL1|23357|angel homolog 1 (Drosophila)##AK301069|ANGEL1|23357|angel homolog 1 (Drosophila)##BC028714|ANGEL1|23357|angel homolog 1 (Drosophila)##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like	0.0	
chr16	12638185	12638251	reg1036849.p2	3.552	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-567645	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-579134	+	NM_001130007	-627700	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	259433	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	259501	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	357250	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr19	56189578	56189740	reg1033157.p1	3.552	+	AF073727 NM_001130071	-1669	+	BC044651 TSC_hg19_v1_chr19_+_56186632	-2986	+	TSC_hg19_v1_chr19_+_56186593 AK022454 AK314690	-3066	+	AY154464 BC136583 NM_176820	60094	-	NM_001145014	80847	+	AK315003 NM_134444	158284	+	AF073727|EPN1|29924|epsin 1##NM_001130071|EPN1|29924|epsin 1##BC044651|EPN1|29924|epsin 1##AK022454|EPN1|29924|epsin 1##AK314690|EPN1|29924|epsin 1##AY154464|NLRP9|338321|NLR family, pyrin domain containing 9##BC136583|NLRP9|338321|NLR family, pyrin domain containing 9##NM_176820|NLRP9|338321|NLR family, pyrin domain containing 9##NM_001145014|RFPL4A|342931|ret finger protein-like 4A##AK315003|NLRP4|147945|NLR family, pyrin domain containing 4##NM_134444|NLRP4|147945|NLR family, pyrin domain containing 4	0.0	
chr3	2029780	2029911	reg1046225.p1	3.552	+	AK314220 BC036338 AB003592 NM_014461 BC113118 AK307814	-895182	+	AK126307 TSC_hg19_v1_chr3_+_577916	-1451930	+	NM_001253388 BC104918 BC143496 BC143498 AB384920	-1668433	+	TSC_hg19_v1_chr3_+_2140549 AK125460 NM_175607	110716	+	NM_001206955	250667	+	AK095729 TSC_hg19_v1_chr3_+_2553286	523435	+	AK314220|CNTN6|27255|contactin 6##BC036338|CNTN6|27255|contactin 6##AB003592|CNTN6|27255|contactin 6##NM_014461|CNTN6|27255|contactin 6##BC113118|CNTN6|27255|contactin 6##AK307814|CNTN6|27255|contactin 6##NM_001253388|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC104918|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143496|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##BC143498|CHL1|10752|cell adhesion molecule with homology to L1CAM (close homolog of L1)##AK125460|CNTN4|152330|contactin 4##NM_175607|CNTN4|152330|contactin 4##NM_001206955|CNTN4|152330|contactin 4##AK095729|CNTN4|152330|contactin 4	0.954318	CTCF.p2:17:0.954
chr5	39106545	39106654	reg1030923.p1	3.552	+	TSC_hg19_v1_chr5_-_39074499 AY515854 BC029608 BC137163 BC137164 BC144509 NM_152756	-32102	-	CU688716 DQ891672 DQ894858 TSC_hg19_v1_chr5_-_39074493 AK128358 CR749280	-32114	-	TSC_hg19_v1_chr5_+_38846260 BC125209 BC125210	-260304	+	AF198052 U93049 AF001862 TSC_hg19_v1_chr5_-_39203164	96518	-	BC117449 BC143645 BC015933 BX647195 BX647196 TSC_hg19_v1_chr5_-_39219666 AK130159 AK290403 NM_001465 NM_199335	113030	-	TSC_hg19_v1_chr5_-_39270745 AK297077 NM_001243093	164140	-	AY515854|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC029608|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137163|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC137164|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC144509|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##NM_152756|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##DQ891672|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##DQ894858|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##AK128358|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##CR749280|RICTOR|253260|RPTOR independent companion of MTOR, complex 2##BC125209|OSMR|9180|oncostatin M receptor##BC125210|OSMR|9180|oncostatin M receptor##AF198052|FYB|2533|FYN binding protein##U93049|FYB|2533|FYN binding protein##AF001862|FYB|2533|FYN binding protein##BC117449|FYB|2533|FYN binding protein##BC143645|FYB|2533|FYN binding protein##BC015933|FYB|2533|FYN binding protein##BX647195|FYB|2533|FYN binding protein##BX647196|FYB|2533|FYN binding protein##AK130159|FYB|2533|FYN binding protein##AK290403|FYB|2533|FYN binding protein##NM_001465|FYB|2533|FYN binding protein##NM_199335|FYB|2533|FYN binding protein##AK297077|FYB|2533|FYN binding protein##NM_001243093|FYB|2533|FYN binding protein	0.885391	CTCF.p2:5:0.885
chr5	78091754	78091859	reg1035168.p1	3.552	+	TSC_hg19_v1_chr5_-_77944584 NM_005779	-147240	-	CR936660 TSC_hg19_v1_chr5_-_77845052	-246783	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-285610	-	J05225 TSC_hg19_v1_chr5_-_78281101	189282	-	AK290865 TSC_hg19_v1_chr5_-_78281134	189327	-	TSC_hg19_v1_chr5_-_78281142 AK314903	189340	-	NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B##AK314903|ARSB|411|arylsulfatase B	0.0	
chr7	74683904	74683997	reg1027343.p1	3.552	+	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	-175576	+	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	-194258	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	-194312	-	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	183570	-	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	304620	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	341015	+	NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73	0.525986	CTCF.p2:30:0.526
chr9	33180063	33180135	reg1039611.p2	3.552	+	NM_001497 TSC_hg19_v1_chr9_-_33167361	-12738	-	TSC_hg19_v1_chr9_-_33167335 BC045773	-12773	-	D29805 X13223 X14085 M22921 U10474 TSC_hg19_v1_chr9_-_33167262	-12852	-	TSC_hg19_v1_chr9_+_33240166 AF048700 BC110068 NM_014471	60081	+	AM392568 BC014774 TSC_hg19_v1_chr9_-_33264707 AK096038 AK316577 AF116273 BC002407 AK222749 AF022224 U46917 BC001936 Z35491 NM_001172415 NM_004323	84509	-	NM_001195536 NM_016410 TSC_hg19_v1_chr9_+_33265035 BC016698 BC007457 AK315455 AK024753 BC018603 BC021168 AK295744	84857	+	NM_001497|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##BC045773|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##D29805|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X13223|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X14085|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##M22921|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##U10474|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AF048700|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##BC110068|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##NM_014471|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##AM392568|BAG1|573|BCL2-associated athanogene##BC014774|BAG1|573|BCL2-associated athanogene##AK096038|BAG1|573|BCL2-associated athanogene##AK316577|BAG1|573|BCL2-associated athanogene##AF116273|BAG1|573|BCL2-associated athanogene##AK222749|BAG1|573|BCL2-associated athanogene##AF022224|BAG1|573|BCL2-associated athanogene##U46917|BAG1|573|BCL2-associated athanogene##BC001936|BAG1|573|BCL2-associated athanogene##Z35491|BAG1|573|BCL2-associated athanogene##NM_001172415|BAG1|573|BCL2-associated athanogene##NM_004323|BAG1|573|BCL2-associated athanogene##NM_001195536|CHMP5|51510|charged multivesicular body protein 5##NM_016410|CHMP5|51510|charged multivesicular body protein 5##BC016698|CHMP5|51510|charged multivesicular body protein 5##BC007457|CHMP5|51510|charged multivesicular body protein 5##AK315455|CHMP5|51510|charged multivesicular body protein 5##AK024753|CHMP5|51510|charged multivesicular body protein 5##BC018603|CHMP5|51510|charged multivesicular body protein 5##BC021168|CHMP5|51510|charged multivesicular body protein 5##AK295744|CHMP5|51510|charged multivesicular body protein 5	0.0	
chr10	135202615	135202777	reg1033676.p1	3.551	+	AF312698 BC032778 NM_152911 NM_207127 NM_207128 TSC_hg19_v1_chr10_+_135192774 AY541516 AY541513 AY541514 AY541515 AY541517 AY541518 AY541519 AY541520 AY541521 AY541523 AY541524 AY358418 DQ891313 DQ893351 DQ894497 DQ896670	-9939	+	BT007123 BC013264 TSC_hg19_v1_chr10_-_135186855 BC008906 D13900 NM_004092	-15810	-	TSC_hg19_v1_chr10_-_135171524 AK310070 AK129527 BC129818 BC129819 NM_001098483 NM_198472	-31170	-	TSC_hg19_v1_chr10_+_135207660 NM_138384 BC026039 AK308997 BC004409 AK074976 AK293988 BC035721 EU831415 EU831508 BC026725 AK292515 AK125012	5036	+	BC040198 TSC_hg19_v1_chr10_-_135238130 NM_001012508	35406	-	TSC_hg19_v1_chr10_+_135340866 AK290822 NM_000773 J02625 AF182276 DQ149222 BC067435 BC067433 CU688292 AF084225 AJ853939 AJ853940 AJ877238	138236	+	AF312698|PAOX|196743|polyamine oxidase (exo-N4-amino)##BC032778|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_152911|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207127|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207128|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541516|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541513|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541514|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541515|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541517|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541518|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541519|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541520|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541521|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541523|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541524|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY358418|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ891313|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ893351|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ894497|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ896670|PAOX|196743|polyamine oxidase (exo-N4-amino)##BT007123|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##BC013264|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##BC008906|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##D13900|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##NM_004092|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##AK310070|C10orf125|282969|chromosome 10 open reading frame 125##AK129527|C10orf125|282969|chromosome 10 open reading frame 125##BC129818|C10orf125|282969|chromosome 10 open reading frame 125##BC129819|C10orf125|282969|chromosome 10 open reading frame 125##NM_001098483|C10orf125|282969|chromosome 10 open reading frame 125##NM_198472|C10orf125|282969|chromosome 10 open reading frame 125##NM_138384|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026039|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK308997|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC004409|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK074976|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK293988|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC035721|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831415|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831508|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026725|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK292515|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK125012|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC040198|SPRN|503542|shadow of prion protein homolog (zebrafish)##NM_001012508|SPRN|503542|shadow of prion protein homolog (zebrafish)##AK290822|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##NM_000773|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##J02625|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF182276|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##DQ149222|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067435|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067433|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF084225|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853939|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853940|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ877238|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	0.0	
chr10	62784609	62784719	reg1036837.p1	3.551	+	AK075129 BC093035 TSC_hg19_v1_chr10_-_62761269	-23424	-	BC041791 AB018283 BC032848 TSC_hg19_v1_chr10_-_62704033 NM_001242359 NM_014836 AK307630	-80712	-	TSC_hg19_v1_chr10_+_62538253 BC107750 AK291939	-246393	+	BC042872 TSC_hg19_v1_chr10_-_63212971 AK125611	428295	-	CR749606 NM_178505	428543	-	BC041932 NM_173554	638054	+	AK075129|RHOBTB1|9886|Rho-related BTB domain containing 1##BC093035|RHOBTB1|9886|Rho-related BTB domain containing 1##BC041791|RHOBTB1|9886|Rho-related BTB domain containing 1##AB018283|RHOBTB1|9886|Rho-related BTB domain containing 1##BC032848|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_001242359|RHOBTB1|9886|Rho-related BTB domain containing 1##NM_014836|RHOBTB1|9886|Rho-related BTB domain containing 1##AK307630|RHOBTB1|9886|Rho-related BTB domain containing 1##BC107750|CDK1|983|cyclin-dependent kinase 1##AK291939|CDK1|983|cyclin-dependent kinase 1##BC042872|TMEM26|219623|transmembrane protein 26##AK125611|TMEM26|219623|transmembrane protein 26##CR749606|TMEM26|219623|transmembrane protein 26##NM_178505|TMEM26|219623|transmembrane protein 26##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107	0.133667	
chr11	67045194	67045318	reg1026012.p4	3.551	+	TSC_hg19_v1_chr11_+_67034167 CU691526 DQ891148 DQ894328	-11083	+	TSC_hg19_v1_chr11_+_67034155 M80776	-11103	+	TSC_hg19_v1_chr11_+_67033929 BC037963 BC090863	-11322	+	NM_207354 TSC_hg19_v1_chr11_+_67056786 BC110419	11518	+	TSC_hg19_v1_chr11_+_67056815 AK124721 AK096277 AK126438	11587	+	NM_017857 TSC_hg19_v1_chr11_+_67070955 AK000522	25685	+	DQ891148|ADRBK1|156|adrenergic, beta, receptor kinase 1##DQ894328|ADRBK1|156|adrenergic, beta, receptor kinase 1##M80776|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC037963|ADRBK1|156|adrenergic, beta, receptor kinase 1##BC090863|ADRBK1|156|adrenergic, beta, receptor kinase 1##NM_207354|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##BC110419|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK124721|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK096277|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##AK126438|ANKRD13D|338692|ankyrin repeat domain 13 family, member D##NM_017857|SSH3|54961|slingshot homolog 3 (Drosophila)##AK000522|SSH3|54961|slingshot homolog 3 (Drosophila)	0.0	
chr11	69044715	69044843	reg1033613.p1	3.551	+	BC064339 TSC_hg19_v1_chr11_+_68857563	-187253	+	TSC_hg19_v1_chr11_+_68816414 AK123089 BC063008 AK298919	-228353	+	TSC_hg19_v1_chr11_+_68816317 NM_139075 AK023366 AY029200	-228429	+	TSC_hg19_v1_chr11_+_69061621 AK000473 AK290121 NM_138768 AK026148 AJ223366 BC011815	16843	+	TSC_hg19_v1_chr11_+_69455867 NM_053056	411077	+	TSC_hg19_v1_chr11_+_69455923 AK299044 AK313136 X59798 Z23022 BC025302 M74092 M64349	411131	+	AK123089|TPCN2|219931|two pore segment channel 2##BC063008|TPCN2|219931|two pore segment channel 2##AK298919|TPCN2|219931|two pore segment channel 2##NM_139075|TPCN2|219931|two pore segment channel 2##AK023366|TPCN2|219931|two pore segment channel 2##AY029200|TPCN2|219931|two pore segment channel 2##AK290121|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_138768|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AK026148|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##AJ223366|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##BC011815|MYEOV|26579|myeloma overexpressed (in a subset of t(11;14) positive multiple myelomas)##NM_053056|CCND1|595|cyclin D1##AK299044|CCND1|595|cyclin D1##AK313136|CCND1|595|cyclin D1##X59798|CCND1|595|cyclin D1##BC025302|CCND1|595|cyclin D1##M74092|CCND1|595|cyclin D1##M64349|CCND1|595|cyclin D1	0.062744	
chr1	204684036	204684188	reg1035978.p1	3.551	+	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	-29521	-	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	-198502	+	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	-198610	+	TSC_hg19_v1_chr1_+_204797779 BC040674 NM_001005388 NM_001005389 NM_001160332 NM_001160333 NM_015090 AK295291 AK299262 AK090639 AX746553	113700	+	TSC_hg19_v1_chr1_+_204839989 AK308686	155871	+	NM_001160331 BC137013 BC144454 BC144455 AB384522	229286	+	AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2##AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC040674|NFASC|23114|neurofascin##NM_001005388|NFASC|23114|neurofascin##NM_001005389|NFASC|23114|neurofascin##NM_001160332|NFASC|23114|neurofascin##NM_001160333|NFASC|23114|neurofascin##NM_015090|NFASC|23114|neurofascin##AK295291|NFASC|23114|neurofascin##AK299262|NFASC|23114|neurofascin##AK090639|NFASC|23114|neurofascin##AK308686|NFASC|23114|neurofascin##NM_001160331|NFASC|23114|neurofascin##BC137013|NFASC|23114|neurofascin##BC144454|NFASC|23114|neurofascin##BC144455|NFASC|23114|neurofascin	0.65071	CTCF.p2:-37:0.651
chr1	36359745	36359914	reg1035381.p1	3.551	+	TSC_hg19_v1_chr1_+_36348834 AK314148 AB385028	-10910	+	TSC_hg19_v1_chr1_+_36348815 BC063275	-11015	+	TSC_hg19_v1_chr1_+_36348795 AF093097 NM_012199	-11026	+	TSC_hg19_v1_chr1_+_36387789 AK000326	28030	+	TSC_hg19_v1_chr1_+_36396318 AK027796	36495	+	TSC_hg19_v1_chr1_+_36396730 BC066888 NM_024852 NM_177422 AK292870 BC025769 AK022827	36971	+	AK314148|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1##BC063275|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1##AF093097|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1##NM_012199|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1##AK000326|EIF2C1|26523|eukaryotic translation initiation factor 2C, 1##AK027796|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3##BC066888|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3##NM_024852|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3##NM_177422|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3##AK292870|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3##BC025769|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3##AK022827|EIF2C3|192669|eukaryotic translation initiation factor 2C, 3	0.561211	CTCF.p2:93:0.561
chr15	54834092	54834215	reg1038525.p1	3.551	+	NM_001080534	-529053	+	AK096055 BX537884 NM_182758	-782306	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	-1751959	-	TSC_hg19_v1_chr15_-_55489117 CR457179 AB463507 CU688538 AF060926 BC012913 BC026267 BC093067 BC016777 BC028672 AK055713 BC008422	654939	-	BC008449 BC014576 AK315431 TSC_hg19_v1_chr15_-_55489135 BC005344 BC009593 BC009604 BC016312 BC016331 BC026266 BC016725 BC008499 BC035995 BC008409 AF165521 AF201949 AF212226 NM_016304	655026	-	AF125393 NM_183234 U57094 U38654 NM_004580	728384	-	NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##CR457179|RSL24D1|51187|ribosomal L24 domain containing 1##AF060926|RSL24D1|51187|ribosomal L24 domain containing 1##BC012913|RSL24D1|51187|ribosomal L24 domain containing 1##BC026267|RSL24D1|51187|ribosomal L24 domain containing 1##BC093067|RSL24D1|51187|ribosomal L24 domain containing 1##BC016777|RSL24D1|51187|ribosomal L24 domain containing 1##BC028672|RSL24D1|51187|ribosomal L24 domain containing 1##AK055713|RSL24D1|51187|ribosomal L24 domain containing 1##BC008422|RSL24D1|51187|ribosomal L24 domain containing 1##BC008449|RSL24D1|51187|ribosomal L24 domain containing 1##BC014576|RSL24D1|51187|ribosomal L24 domain containing 1##AK315431|RSL24D1|51187|ribosomal L24 domain containing 1##BC005344|RSL24D1|51187|ribosomal L24 domain containing 1##BC009593|RSL24D1|51187|ribosomal L24 domain containing 1##BC009604|RSL24D1|51187|ribosomal L24 domain containing 1##BC016312|RSL24D1|51187|ribosomal L24 domain containing 1##BC016331|RSL24D1|51187|ribosomal L24 domain containing 1##BC026266|RSL24D1|51187|ribosomal L24 domain containing 1##BC016725|RSL24D1|51187|ribosomal L24 domain containing 1##BC008499|RSL24D1|51187|ribosomal L24 domain containing 1##BC035995|RSL24D1|51187|ribosomal L24 domain containing 1##BC008409|RSL24D1|51187|ribosomal L24 domain containing 1##AF165521|RSL24D1|51187|ribosomal L24 domain containing 1##AF201949|RSL24D1|51187|ribosomal L24 domain containing 1##AF212226|RSL24D1|51187|ribosomal L24 domain containing 1##NM_016304|RSL24D1|51187|ribosomal L24 domain containing 1##AF125393|RAB27A|5873|RAB27A, member RAS oncogene family##NM_183234|RAB27A|5873|RAB27A, member RAS oncogene family##U57094|RAB27A|5873|RAB27A, member RAS oncogene family##U38654|RAB27A|5873|RAB27A, member RAS oncogene family##NM_004580|RAB27A|5873|RAB27A, member RAS oncogene family	0.0	
chr15	64118860	64118938	reg1039385.p1	3.551	+	BC017581 BC036918 AK093077 TSC_hg19_v1_chr15_-_63893135	-225857	-	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	-229320	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	-322022	+	TSC_hg19_v1_chr15_-_64126081 U50078	7185	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	7221	-	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	7241	-	BC017581|LOC100130855|100130855|uncharacterized LOC100130855##BC036918|LOC100130855|100130855|uncharacterized LOC100130855##AK093077|LOC100130855|100130855|uncharacterized LOC100130855##NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	0.834586	CTCF.p2:38:0.835
chr17	60143167	60143261	reg1012285.p1	3.551	+	TSC_hg19_v1_chr17_-_60142600 BC140891 AF117754 NM_005121	-587	-	TSC_hg19_v1_chr17_-_60005339 AB033113 AK308307 AK299032 AL136800 NM_020748	-137872	-	BC101472 BC101474 AF360549 TSC_hg19_v1_chr17_-_59940873 NM_032043	-202420	-	NM_001144933	304364	+	AK098684 NM_173503 BC101752 BC101778	314712	+	TSC_hg19_v1_chr17_+_60501257 NM_181725 BC006985 AB590991 AF161384 AK022822 AF161385	358049	+	BC140891|MED13|9969|mediator complex subunit 13##AF117754|MED13|9969|mediator complex subunit 13##NM_005121|MED13|9969|mediator complex subunit 13##AB033113|INTS2|57508|integrator complex subunit 2##AK308307|INTS2|57508|integrator complex subunit 2##AK299032|INTS2|57508|integrator complex subunit 2##AL136800|INTS2|57508|integrator complex subunit 2##NM_020748|INTS2|57508|integrator complex subunit 2##BC101472|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##BC101474|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AF360549|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_032043|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_001144933|EFCAB3|146779|EF-hand calcium binding domain 3##AK098684|EFCAB3|146779|EF-hand calcium binding domain 3##NM_173503|EFCAB3|146779|EF-hand calcium binding domain 3##BC101752|EFCAB3|146779|EF-hand calcium binding domain 3##BC101778|EFCAB3|146779|EF-hand calcium binding domain 3##NM_181725|METTL2A|339175|methyltransferase like 2A##BC006985|METTL2A|339175|methyltransferase like 2A##AF161384|METTL2A|339175|methyltransferase like 2A##AK022822|METTL2A|339175|methyltransferase like 2A##AF161385|METTL2A|339175|methyltransferase like 2A	0.294945	CTCF.p2:-20:0.295
chr18	63605945	63606054	reg1039629.p1	3.551	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	-187797	+	TSC_hg19_v1_chr18_+_63417845 BC036786	-188133	+	AJ007611 NM_033646	-188512	+	AJ007607 NM_021153 AK304000 AK315257 BC015877	665312	-	AK021849 TSC_hg19_v1_chr18_-_65182656	1576584	-	TSC_hg19_v1_chr18_-_65183956 NM_032160	1577947	-	AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AK021849|DSEL|92126|dermatan sulfate epimerase-like##NM_032160|DSEL|92126|dermatan sulfate epimerase-like	0.972307	CTCF.p2:-3:0.972
chr19	53039307	53039373	reg1036149.p1	3.551	+	CR749856 TSC_hg19_v1_chr19_+_53030941 NM_001039886	-8411	+	AB091373 AB091374 AK299106 NM_001099694 TSC_hg19_v1_chr19_+_52956836 AL833487 AB091376 AB091375	-82513	+	AB086839 AB086840 AB091368 AB091369 NM_001143938 NM_001143939	-104674	+	TSC_hg19_v1_chr19_+_53073539 NM_018260 AK001753 BC131719 BC136425 BC136426 BC054884 BC080612	34202	+	BC067346 NM_001172655	34576	+	TSC_hg19_v1_chr19_-_53141603 BC032867 AK027518 NM_001105549 NM_001105550 NM_001105551 NM_001105552 NM_001105553 NM_001105554 NM_018300	102284	-	CR749856|ZNF808|388558|zinc finger protein 808##NM_001039886|ZNF808|388558|zinc finger protein 808##AB091373|ZNF578|147660|zinc finger protein 578##AB091374|ZNF578|147660|zinc finger protein 578##AK299106|ZNF578|147660|zinc finger protein 578##NM_001099694|ZNF578|147660|zinc finger protein 578##AB091376|ZNF578|147660|zinc finger protein 578##AB091375|ZNF578|147660|zinc finger protein 578##AB086839|ZNF534|147658|zinc finger protein 534##AB086840|ZNF534|147658|zinc finger protein 534##NM_001143938|ZNF534|147658|zinc finger protein 534##NM_001143939|ZNF534|147658|zinc finger protein 534##NM_018260|ZNF701|55762|zinc finger protein 701##AK001753|ZNF701|55762|zinc finger protein 701##BC131719|ZNF701|55762|zinc finger protein 701##BC136425|ZNF701|55762|zinc finger protein 701##BC136426|ZNF701|55762|zinc finger protein 701##BC054884|ZNF701|55762|zinc finger protein 701##BC080612|ZNF701|55762|zinc finger protein 701##BC067346|ZNF701|55762|zinc finger protein 701##NM_001172655|ZNF701|55762|zinc finger protein 701##BC032867|ZNF83|55769|zinc finger protein 83##AK027518|ZNF83|55769|zinc finger protein 83##NM_001105549|ZNF83|55769|zinc finger protein 83##NM_001105550|ZNF83|55769|zinc finger protein 83##NM_001105551|ZNF83|55769|zinc finger protein 83##NM_001105552|ZNF83|55769|zinc finger protein 83##NM_001105553|ZNF83|55769|zinc finger protein 83##NM_001105554|ZNF83|55769|zinc finger protein 83##NM_018300|ZNF83|55769|zinc finger protein 83	0.0	
chr2	127421937	127422088	reg1043514.p1	3.551	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-8220	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-8305	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2639148	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	442729	-	BC039307 NM_001001665	541330	-	AK131190 TSC_hg19_v1_chr2_-_127977781	555705	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.0	
chr22	30193520	30193651	reg1027262.p2	3.551	+	AF161536 TSC_hg19_v1_chr22_+_30163357 AB028598 BC005402 NM_001003684 NM_013387 AF161500 BC015971 AK225973 AF112217 AF161468	-30216	+	TSC_hg19_v1_chr22_-_30162997 AK123261	-30590	-	BC009717 TSC_hg19_v1_chr22_-_30162985 AK292671 NM_001003692 NM_019103	-30625	-	AK126172 TSC_hg19_v1_chr22_-_30234220 AK022886	40602	-	BC025368 TSC_hg19_v1_chr22_-_30234264 AK303257 NM_001242906 NM_032204	40687	-	TSC_hg19_v1_chr22_+_30279167 BC151217 AK289581 NM_021090 NM_153050 NM_153051	85544	+	AF161536|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AB028598|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##BC005402|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##NM_001003684|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##NM_013387|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AF161500|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##BC015971|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AK225973|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AF112217|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##AF161468|UQCR10|29796|ubiquinol-cytochrome c reductase, complex III subunit X##BC009717|ZMAT5|55954|zinc finger, matrin-type 5##AK292671|ZMAT5|55954|zinc finger, matrin-type 5##NM_001003692|ZMAT5|55954|zinc finger, matrin-type 5##NM_019103|ZMAT5|55954|zinc finger, matrin-type 5##AK022886|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##BC025368|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##AK303257|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##NM_001242906|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##NM_032204|ASCC2|84164|activating signal cointegrator 1 complex subunit 2##BC151217|MTMR3|8897|myotubularin related protein 3##AK289581|MTMR3|8897|myotubularin related protein 3##NM_021090|MTMR3|8897|myotubularin related protein 3##NM_153050|MTMR3|8897|myotubularin related protein 3##NM_153051|MTMR3|8897|myotubularin related protein 3	0.0	
chr3	149299152	149299245	reg1043861.p1	3.551	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-106709	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-106796	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-203656	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	76537	-	AK022036 NM_001168278	121861	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	171041	-	AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2	0.0	
chr5	132010439	132010541	reg1033151.p1	3.551	+	NM_000589 NM_172348	-1118	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	-16600	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-117850	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	62727	-	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	72654	+	TSC_hg19_v1_chr5_-_132112954 BC140759 BC171779 AK057797 AF179995 AF440761 AF440762 D86957 NM_001098811 NM_001098812 NM_015146	102514	-	NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A##AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2##BC140759|SEPT8|23176|septin 8##BC171779|SEPT8|23176|septin 8##AK057797|SEPT8|23176|septin 8##AF179995|SEPT8|23176|septin 8##AF440761|SEPT8|23176|septin 8##AF440762|SEPT8|23176|septin 8##D86957|SEPT8|23176|septin 8##NM_001098811|SEPT8|23176|septin 8##NM_001098812|SEPT8|23176|septin 8##NM_015146|SEPT8|23176|septin 8	0.0	
chr5	88597388	88597523	reg1034308.p1	3.551	+	AL833268 AL833274 NM_001131005 NM_001193347	-397561	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-412191	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-412335	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	1108084	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1172727	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1173123	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr6	52226701	52226822	reg1030525.p1	3.551	+	TSC_hg19_v1_chr6_-_52149551 D38073 AK299566 NM_002388 AK301704	-77182	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	-77241	-	AB528319 DQ893654 DQ895840 TSC_hg19_v1_chr6_-_52149506 AK312928 AK300754 X62153 AY032603	-77270	-	TSC_hg19_v1_chr6_+_52226960 NM_133367 AF347029 AK315088 BC030664	196	+	TSC_hg19_v1_chr6_+_52285086 NM_018100 AK225543 AL122084 AK001328 EU520261 BC020210 AK295064 BC012921 DQ892170 DQ895364 CU676508	58317	+	AK297632 NM_001172420	59043	+	D38073|MCM3|4172|minichromosome maintenance complex component 3##AK299566|MCM3|4172|minichromosome maintenance complex component 3##NM_002388|MCM3|4172|minichromosome maintenance complex component 3##AK301704|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3##DQ893654|MCM3|4172|minichromosome maintenance complex component 3##DQ895840|MCM3|4172|minichromosome maintenance complex component 3##AK312928|MCM3|4172|minichromosome maintenance complex component 3##AK300754|MCM3|4172|minichromosome maintenance complex component 3##X62153|MCM3|4172|minichromosome maintenance complex component 3##AY032603|MCM3|4172|minichromosome maintenance complex component 3##NM_133367|PAQR8|85315|progestin and adipoQ receptor family member VIII##AF347029|PAQR8|85315|progestin and adipoQ receptor family member VIII##AK315088|PAQR8|85315|progestin and adipoQ receptor family member VIII##BC030664|PAQR8|85315|progestin and adipoQ receptor family member VIII##NM_018100|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK225543|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AL122084|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK001328|EFHC1|114327|EF-hand domain (C-terminal) containing 1##EU520261|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC020210|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK295064|EFHC1|114327|EF-hand domain (C-terminal) containing 1##BC012921|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ892170|EFHC1|114327|EF-hand domain (C-terminal) containing 1##DQ895364|EFHC1|114327|EF-hand domain (C-terminal) containing 1##AK297632|EFHC1|114327|EF-hand domain (C-terminal) containing 1##NM_001172420|EFHC1|114327|EF-hand domain (C-terminal) containing 1	0.0	
chr7	128554705	128554854	reg1028707.p1	3.551	+	TSC_hg19_v1_chr7_-_128550763 AK122706 NM_001135914 NM_199349	-4013	-	TSC_hg19_v1_chr7_-_128543406 AK095464	-11378	-	NM_001195150	-48316	+	AK293654 AY693665 AY693668 NM_001098629 NM_001098630 NM_001242452 DQ995492 U51127 AK297083 AY504947 AY693666 AY693667 EU258896	23257	+	DQ995493 AY693669 BC004139 BC004201 DQ277633 NM_032643	23479	+	EU258898 NM_001098627 DQ995494 AY504946 DQ277634	26029	+	AK122706|KCP|375616|kielin/chordin-like protein##NM_001135914|KCP|375616|kielin/chordin-like protein##NM_199349|KCP|375616|kielin/chordin-like protein##AK095464|KCP|375616|kielin/chordin-like protein##NM_001195150|LOC100130705|100130705|uncharacterized LOC100130705##AK293654|IRF5|3663|interferon regulatory factor 5##AY693665|IRF5|3663|interferon regulatory factor 5##AY693668|IRF5|3663|interferon regulatory factor 5##NM_001098629|IRF5|3663|interferon regulatory factor 5##NM_001098630|IRF5|3663|interferon regulatory factor 5##NM_001242452|IRF5|3663|interferon regulatory factor 5##DQ995492|IRF5|3663|interferon regulatory factor 5##U51127|IRF5|3663|interferon regulatory factor 5##AK297083|IRF5|3663|interferon regulatory factor 5##AY504947|IRF5|3663|interferon regulatory factor 5##AY693666|IRF5|3663|interferon regulatory factor 5##AY693667|IRF5|3663|interferon regulatory factor 5##EU258896|IRF5|3663|interferon regulatory factor 5##AY693669|IRF5|3663|interferon regulatory factor 5##BC004139|IRF5|3663|interferon regulatory factor 5##BC004201|IRF5|3663|interferon regulatory factor 5##DQ277633|IRF5|3663|interferon regulatory factor 5##NM_032643|IRF5|3663|interferon regulatory factor 5##EU258898|IRF5|3663|interferon regulatory factor 5##NM_001098627|IRF5|3663|interferon regulatory factor 5##DQ995494|IRF5|3663|interferon regulatory factor 5##AY504946|IRF5|3663|interferon regulatory factor 5##DQ277634|IRF5|3663|interferon regulatory factor 5	0.0	
chr8	123248549	123248730	reg1038819.p1	3.551	+	AF221548 BC109071 BC109072 NM_005328 U54804 TSC_hg19_v1_chr8_-_122653681 AK297724 AJ604570	-595013	-	TSC_hg19_v1_chr8_-_121824287 NM_021021 AK292655	-1424133	-	BC098573 TSC_hg19_v1_chr8_-_121824269	-1424369	-	TSC_hg19_v1_chr8_+_123793897 NM_014943	545272	+	BC042145 TSC_hg19_v1_chr8_+_123794000	545355	+	TSC_hg19_v1_chr8_+_123794108 AB020661	545464	+	BC109071|HAS2|3037|hyaluronan synthase 2##BC109072|HAS2|3037|hyaluronan synthase 2##NM_005328|HAS2|3037|hyaluronan synthase 2##U54804|HAS2|3037|hyaluronan synthase 2##AK297724|HAS2|3037|hyaluronan synthase 2##NM_021021|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##AK292655|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##BC098573|SNTB1|6641|syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1)##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2	0.998141	CTCF.p2:7:0.998
chrX	62365180	62365286	reg1031102.p1	3.551	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	-4428274	-	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-4746773	+	NM_007157	-4746965	+	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	205966	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	283034	-	TSC_hg19_v1_chrX_-_62780938 AK001756 AL080202	415634	-	EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249##AK001756|LOC92249|92249|uncharacterized LOC92249##AL080202|LOC92249|92249|uncharacterized LOC92249	0.92083	CTCF.p2:9:0.921
chr10	17258398	17258578	reg1033756.p2	3.550	+	NM_004412	-14419	-	TSC_hg19_v1_chr10_-_17243660 CR450316 AF045888 AK291417 AF012128 BC047733 AK303428 BX537961 AJ223333 AK299027	-14755	-	AF034611 NM_001081 TSC_hg19_v1_chr10_-_17171878	-86655	-	NM_003380	11769	+	BC066956 TSC_hg19_v1_chr10_+_17270601	12048	+	AK056766 AK091813 AK097336 AK098444 AK222507 AK222602 TSC_hg19_v1_chr10_+_17271276	12788	+	NM_004412|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##CR450316|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF045888|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK291417|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF012128|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##BC047733|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK303428|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##BX537961|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AJ223333|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK299027|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)##NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)##NM_003380|VIM|7431|vimentin##BC066956|VIM|7431|vimentin##AK056766|VIM|7431|vimentin##AK091813|VIM|7431|vimentin##AK097336|VIM|7431|vimentin##AK098444|VIM|7431|vimentin##AK222507|VIM|7431|vimentin##AK222602|VIM|7431|vimentin	0.0	
chr12	46940639	46940706	reg1031301.p1	3.550	+	TSC_hg19_v1_chr12_-_46766619 NM_018976	-174069	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-174383	-	NM_001077484 NM_030674	-277465	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	279084	-	TSC_hg19_v1_chr12_+_47473404 BC072670	532725	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	532911	-	NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2	0.018858	
chr15	43662805	43662925	reg1039704.p1	3.550	+	AF525399 BC109270 BC109271 AB527871 AK122788 NM_152455 BC043612	-682	-	AK298870 NM_001012969 NM_001159280 BC075857	-39968	+	CU677535 TSC_hg19_v1_chr15_-_43622812 AB011119 AK292587 AK300820 BC015949 NM_014793	-40112	-	TSC_hg19_v1_chr15_+_43663298 AK027703 BC012801 NM_014444 BC009870	438	+	TSC_hg19_v1_chr15_+_43663381 AJ249677 CU680398 DQ896017 EU176400	586	+	TSC_hg19_v1_chr15_-_43785355 AK292915 BC017846 AB210025 BX537418 AK295764 AK307405 NM_001141979 NM_001141980	122445	-	AF525399|ZSCAN29|146050|zinc finger and SCAN domain containing 29##BC109270|ZSCAN29|146050|zinc finger and SCAN domain containing 29##BC109271|ZSCAN29|146050|zinc finger and SCAN domain containing 29##AK122788|ZSCAN29|146050|zinc finger and SCAN domain containing 29##NM_152455|ZSCAN29|146050|zinc finger and SCAN domain containing 29##BC043612|ZSCAN29|146050|zinc finger and SCAN domain containing 29##AK298870|ADAL|161823|adenosine deaminase-like##NM_001012969|ADAL|161823|adenosine deaminase-like##NM_001159280|ADAL|161823|adenosine deaminase-like##BC075857|ADAL|161823|adenosine deaminase-like##AK292587|LCMT2|9836|leucine carboxyl methyltransferase 2##AK300820|LCMT2|9836|leucine carboxyl methyltransferase 2##BC015949|LCMT2|9836|leucine carboxyl methyltransferase 2##NM_014793|LCMT2|9836|leucine carboxyl methyltransferase 2##AK027703|TUBGCP4|27229|tubulin, gamma complex associated protein 4##BC012801|TUBGCP4|27229|tubulin, gamma complex associated protein 4##NM_014444|TUBGCP4|27229|tubulin, gamma complex associated protein 4##BC009870|TUBGCP4|27229|tubulin, gamma complex associated protein 4##AJ249677|TUBGCP4|27229|tubulin, gamma complex associated protein 4##DQ896017|TUBGCP4|27229|tubulin, gamma complex associated protein 4##EU176400|TUBGCP4|27229|tubulin, gamma complex associated protein 4##AK292915|TP53BP1|7158|tumor protein p53 binding protein 1##BC017846|TP53BP1|7158|tumor protein p53 binding protein 1##AB210025|TP53BP1|7158|tumor protein p53 binding protein 1##BX537418|TP53BP1|7158|tumor protein p53 binding protein 1##AK295764|TP53BP1|7158|tumor protein p53 binding protein 1##AK307405|TP53BP1|7158|tumor protein p53 binding protein 1##NM_001141979|TP53BP1|7158|tumor protein p53 binding protein 1##NM_001141980|TP53BP1|7158|tumor protein p53 binding protein 1	0.0	
chr15	52394537	52394631	reg1032794.p2	3.550	+	TSC_hg19_v1_chr15_+_52311442 BC035492	-83123	+	TSC_hg19_v1_chr15_+_52311432 CR749401	-83150	+	TSC_hg19_v1_chr15_+_52311425 NM_002748	-83165	+	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	10362	-	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	77557	-	TSC_hg19_v1_chr15_+_52472257 AF007131	77751	+	BC035492|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##NM_002748|MAPK6|5597|mitogen-activated protein kinase 6##AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973	0.0	
chr16	27248773	27248898	reg1030482.p1	3.550	+	AK297166 NM_001145348	-33540	+	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	-34008	+	NM_001145545 BC031257 AK311574	-170588	+	TSC_hg19_v1_chr16_-_27280055 AK315674	31217	-	TSC_hg19_v1_chr16_-_27280058 AF161451 AF161455 AK056795 NM_145080	31250	-	TSC_hg19_v1_chr16_+_27325254 AK314863 NM_000418 NM_001008699 AK303255	76419	+	AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##AK315674|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AF161451|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AF161455|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AK056795|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##NM_145080|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AK314863|IL4R|3566|interleukin 4 receptor##NM_000418|IL4R|3566|interleukin 4 receptor##NM_001008699|IL4R|3566|interleukin 4 receptor##AK303255|IL4R|3566|interleukin 4 receptor	0.0	
chr17	73106112	73106241	reg1025182.p2	3.550	+	TSC_hg19_v1_chr17_+_73106069 AK300997 AK310697 BC011728 NM_024585	-122	+	TSC_hg19_v1_chr17_+_73084056 BC009684 NM_004695	-22121	+	TSC_hg19_v1_chr17_+_73043325 D79998	-62843	+	TSC_hg19_v1_chr17_-_73127869 CU692564 BC002516 BC022334 BC008183 BC047763 BC017454 AF154829 AK000419 NM_001252377 NM_014595	21681	-	DQ891909 DQ895094 DQ896835 EU176653 CU674698 AF177862 BC001420 TSC_hg19_v1_chr17_-_73150608 AF266846 AK223321 AK312613	44376	-	AY322169 AY322170 NM_001002032 NM_001002033 NM_016185 AF086910	44597	-	AK300997|ARMC7|79637|armadillo repeat containing 7##BC011728|ARMC7|79637|armadillo repeat containing 7##NM_024585|ARMC7|79637|armadillo repeat containing 7##BC009684|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##NM_004695|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##D79998|KCTD2|23510|potassium channel tetramerisation domain containing 2##BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic##AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic##DQ891909|HN1|51155|hematological and neurological expressed 1##DQ895094|HN1|51155|hematological and neurological expressed 1##DQ896835|HN1|51155|hematological and neurological expressed 1##EU176653|HN1|51155|hematological and neurological expressed 1##AF177862|HN1|51155|hematological and neurological expressed 1##BC001420|HN1|51155|hematological and neurological expressed 1##AF266846|HN1|51155|hematological and neurological expressed 1##AK223321|HN1|51155|hematological and neurological expressed 1##AK312613|HN1|51155|hematological and neurological expressed 1##AY322169|HN1|51155|hematological and neurological expressed 1##AY322170|HN1|51155|hematological and neurological expressed 1##NM_001002032|HN1|51155|hematological and neurological expressed 1##NM_001002033|HN1|51155|hematological and neurological expressed 1##NM_016185|HN1|51155|hematological and neurological expressed 1##AF086910|HN1|51155|hematological and neurological expressed 1	0.0	
chr22	17645664	17645758	reg1042288.p1	3.550	+	TSC_hg19_v1_chr22_+_17640246 AF307448	-5447	+	NM_033070 TSC_hg19_v1_chr22_-_17640168	-5532	-	AF273271 TSC_hg19_v1_chr22_-_17640158 AK315156 AK000461	-5551	-	AF273270 NM_017829	465	-	TSC_hg19_v1_chr22_-_17680487 AK027682 AK074702 NM_177405	34803	-	AF190746 NM_017424	45067	-	AF307448|CECR5-AS1|100130717|CECR5 antisense RNA 1 (non-protein coding)##NM_033070|CECR5|27440|cat eye syndrome chromosome region, candidate 5##AF273271|CECR5|27440|cat eye syndrome chromosome region, candidate 5##AK315156|CECR5|27440|cat eye syndrome chromosome region, candidate 5##AK000461|CECR5|27440|cat eye syndrome chromosome region, candidate 5##AF273270|CECR5|27440|cat eye syndrome chromosome region, candidate 5##NM_017829|CECR5|27440|cat eye syndrome chromosome region, candidate 5##AK027682|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK074702|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_177405|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF190746|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_017424|CECR1|51816|cat eye syndrome chromosome region, candidate 1	0.292132	CTCF.p2:22:0.292
chr22	18484330	18484432	reg1039491.p2	3.550	+	TSC_hg19_v1_chr22_-_18484268 AK127487	-153	-	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-227047	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-227158	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	22880	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	76307	+	TSC_hg19_v1_chr22_+_18560755 NM_001127649 BC016280 BC047320	76386	+	AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26##NM_001127649|PEX26|55670|peroxisomal biogenesis factor 26##BC016280|PEX26|55670|peroxisomal biogenesis factor 26##BC047320|PEX26|55670|peroxisomal biogenesis factor 26	0.0	
chr3	156382580	156382669	reg1038032.p1	3.550	+	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	-109681	-	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	-109743	-	NM_172159 BC043166 AK127240	-373814	+	NM_015508	9580	+	AK291261 TSC_hg19_v1_chr3_+_156392402 BX537965 BC050350	9778	+	CR749647 NM_001184717	10090	+	AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##CR749647|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184717|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	0.0	
chr3	178276121	178276302	reg1041993.p2	3.550	+	BC017825 NM_181361	-21988	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1361152	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	-1361260	-	AF209747 NM_005832	341	+	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	513354	-	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	513415	-	BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3	0.0	
chr6	28092307	28092461	reg1041093.p2	3.550	+	NM_003447	-43903	+	BC109251 BC110457 NM_012367	-167366	+	BC136881 BC136901 NM_033057	-212211	-	AK025844 AK294017 AK309837 NM_025231 TSC_hg19_v1_chr6_+_28092406 BC004255	15	+	TSC_hg19_v1_chr6_-_28104623 AK309286 BC043177	12214	-	TSC_hg19_v1_chr6_+_28109660 AB208793 BC096282 BC096283 BC096284 BC130032 NM_006298 U57796	17307	+	NM_003447|ZNF165|7718|zinc finger protein 165##BC109251|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##BC110457|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##NM_012367|OR2B6|26212|olfactory receptor, family 2, subfamily B, member 6##BC136881|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2##BC136901|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2##NM_033057|OR2B2|81697|olfactory receptor, family 2, subfamily B, member 2##AK025844|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK294017|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK309837|ZSCAN16|80345|zinc finger and SCAN domain containing 16##NM_025231|ZSCAN16|80345|zinc finger and SCAN domain containing 16##BC004255|ZSCAN16|80345|zinc finger and SCAN domain containing 16##AK309286|LOC100129195|100129195|uncharacterized LOC100129195##BC043177|LOC100129195|100129195|uncharacterized LOC100129195##AB208793|ZNF192|7745|zinc finger protein 192##BC096282|ZNF192|7745|zinc finger protein 192##BC096283|ZNF192|7745|zinc finger protein 192##BC096284|ZNF192|7745|zinc finger protein 192##BC130032|ZNF192|7745|zinc finger protein 192##NM_006298|ZNF192|7745|zinc finger protein 192##U57796|ZNF192|7745|zinc finger protein 192	0.0	
chr7	123556629	123556736	reg1039927.p1	3.550	+	AF009010 NM_012269	-71460	+	TSC_hg19_v1_chr7_-_123389069 AM295156 CU690940 AB587496 BC013776 AK289795 D88460 CR749438 BC028602 BC052955 NM_003941	-167708	-	NM_207163 AK299434 AK299389 AK300698 AK309449 BC017911 BC062765 AK309496 AB591033	-260745	+	NM_001174044 NM_003117 NM_153189 AY920278 AY920279 S67798 BC026163	8644	+	AK292229 NM_001174045 NM_001174046 AY920280 AY920281	9238	+	TSC_hg19_v1_chr7_-_123673486 NM_001136002	116822	-	AF009010|HYAL4|23553|hyaluronoglucosaminidase 4##NM_012269|HYAL4|23553|hyaluronoglucosaminidase 4##AM295156|WASL|8976|Wiskott-Aldrich syndrome-like##BC013776|WASL|8976|Wiskott-Aldrich syndrome-like##AK289795|WASL|8976|Wiskott-Aldrich syndrome-like##D88460|WASL|8976|Wiskott-Aldrich syndrome-like##CR749438|WASL|8976|Wiskott-Aldrich syndrome-like##BC028602|WASL|8976|Wiskott-Aldrich syndrome-like##BC052955|WASL|8976|Wiskott-Aldrich syndrome-like##NM_003941|WASL|8976|Wiskott-Aldrich syndrome-like##NM_207163|LMOD2|442721|leiomodin 2 (cardiac)##AK299434|LMOD2|442721|leiomodin 2 (cardiac)##AK299389|LMOD2|442721|leiomodin 2 (cardiac)##AK300698|LMOD2|442721|leiomodin 2 (cardiac)##BC017911|LMOD2|442721|leiomodin 2 (cardiac)##BC062765|LMOD2|442721|leiomodin 2 (cardiac)##NM_001174044|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_003117|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_153189|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920278|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920279|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##S67798|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##BC026163|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AK292229|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174045|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001174046|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920280|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##AY920281|SPAM1|6677|sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)##NM_001136002|TMEM229A|730130|transmembrane protein 229A	0.047523	
chr7	139360081	139360189	reg1039360.p1	3.550	+	NM_001080511	-151462	+	BC110858 BC104963 BC104965 AK126174 NM_198508	-191703	-	TSC_hg19_v1_chr7_+_139044997 AB528652 EU832106 EU832200 CU677843 AF151832 AF151817	-315121	+	TSC_hg19_v1_chr7_-_139477798 AF208291 AF326592 NM_001113239 NM_022740	117770	-	TSC_hg19_v1_chr7_+_139478042 BC014117 NM_001130966 NM_001166254	117904	+	NM_001061 NM_001166253 NM_030984 TSC_hg19_v1_chr7_+_139529052 BC041157 AK296069 AK301164 AK303440 AK301049 AB590730 M74055 S60133	168957	+	NM_001080511|CLEC2L|154790|C-type lectin domain family 2, member L##BC110858|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104963|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##BC104965|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##AK126174|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##NM_198508|KLRG2|346689|killer cell lectin-like receptor subfamily G, member 2##EU832106|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##EU832200|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151832|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF151817|LUC7L2|51631|LUC7-like 2 (S. cerevisiae)##AF208291|HIPK2|28996|homeodomain interacting protein kinase 2##AF326592|HIPK2|28996|homeodomain interacting protein kinase 2##NM_001113239|HIPK2|28996|homeodomain interacting protein kinase 2##NM_022740|HIPK2|28996|homeodomain interacting protein kinase 2##BC014117|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001130966|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166254|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001061|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_001166253|TBXAS1|6916|thromboxane A synthase 1 (platelet)##NM_030984|TBXAS1|6916|thromboxane A synthase 1 (platelet)##BC041157|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK296069|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301164|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK303440|TBXAS1|6916|thromboxane A synthase 1 (platelet)##AK301049|TBXAS1|6916|thromboxane A synthase 1 (platelet)##M74055|TBXAS1|6916|thromboxane A synthase 1 (platelet)##S60133|TBXAS1|6916|thromboxane A synthase 1 (platelet)	0.0	
chr8	129063111	129063290	reg1036865.p1	3.550	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-256417	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-314710	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-314875	+	AB042405 NM_031415	1735933	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1888715	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1888806	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr1	157832046	157832152	reg1037813.p2	3.549	+	CU689660 DQ893615 DQ895298 BC033586 U82812 AF011429 AK292040 AY358494 NM_005894	-20537	-	CU689698 AF329488 BC021274 AK315748 AK096690 BC033690 AF459634 AY043464 NM_001159397 NM_001159398 NM_052938	-42214	-	CU686705 AK301113 AY043465 AF459633 AY358130 AK303549 BC069185 NM_030764	-85207	-	AY302131 NM_018240	130963	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	131289	+	BC027926 NM_001766	317637	+	DQ893615|CD5L|922|CD5 molecule-like##DQ895298|CD5L|922|CD5 molecule-like##BC033586|CD5L|922|CD5 molecule-like##U82812|CD5L|922|CD5 molecule-like##AF011429|CD5L|922|CD5 molecule-like##AK292040|CD5L|922|CD5 molecule-like##AY358494|CD5L|922|CD5 molecule-like##NM_005894|CD5L|922|CD5 molecule-like##AF329488|FCRL1|115350|Fc receptor-like 1##BC021274|FCRL1|115350|Fc receptor-like 1##AK315748|FCRL1|115350|Fc receptor-like 1##AK096690|FCRL1|115350|Fc receptor-like 1##BC033690|FCRL1|115350|Fc receptor-like 1##AF459634|FCRL1|115350|Fc receptor-like 1##AY043464|FCRL1|115350|Fc receptor-like 1##NM_001159397|FCRL1|115350|Fc receptor-like 1##NM_001159398|FCRL1|115350|Fc receptor-like 1##NM_052938|FCRL1|115350|Fc receptor-like 1##AK301113|FCRL2|79368|Fc receptor-like 2##AY043465|FCRL2|79368|Fc receptor-like 2##AF459633|FCRL2|79368|Fc receptor-like 2##AY358130|FCRL2|79368|Fc receptor-like 2##AK303549|FCRL2|79368|Fc receptor-like 2##BC069185|FCRL2|79368|Fc receptor-like 2##NM_030764|FCRL2|79368|Fc receptor-like 2##AY302131|KIRREL|55243|kin of IRRE like (Drosophila)##NM_018240|KIRREL|55243|kin of IRRE like (Drosophila)##BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule	0.660452	CTCF.p2:18:0.660
chr14	107249364	107249458	reg1039670.p1	3.549	+	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	-30413	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	-38110	-	JF810265 DQ454799 FJ840007 FJ840015 DQ454561 DQ454955 DQ454612 DQ454663 DQ454685 FJ840092 FJ840295 FJ873837 AJ008218 JF810272 JF810273 AY003862 AJ132562 Y08732 AF103327 EU099062 EU620029 GQ504979 HQ392897 AF103116 AF103087 AF103100 HM774925 JN110942 HM774229 FJ385350 GQ504960 HM774112 HM774402 HM774448 HM774462 HM774524 HM774766 HM775010 AF103135 HM774927 HM774932 HM774189 U00529 Y14940 AF103057 AF103351 EU146338 L03141 L03153 AF029328 AF485459 DQ431489 L03143 L03173 L03177 AF035801 AY423195 AY423198 AY423206 DQ431488 DQ431492 HM995020 DQ431490 GU570297 HM152513 HM994969 HM994972 HM994977 HM994978 HM994981 HM994982 HM994989 HM995522 HM995532 HM996141 HM996526 DQ187603 DQ187629 DQ322887 DQ322888 DQ322889 DQ322890 DQ322960 DQ840663 DQ840674 DQ840675 DQ840677 DQ840678 DQ840680 DQ840681 DQ840682 DQ840683 DQ840687 DQ840758 DQ840769 DQ840770 DQ840771 DQ840773 DQ840781 DQ840844 DQ840857 DQ840859 DQ840860 DQ840863 DQ840910 DQ840917 DQ840918 AF021973 AF048774 AF115122 AF151702 AF174111 AJ238039 AJ579199 AJ579279 AY866726 AY866767 DQ100754 DQ100773 DQ100787 DQ100849 DQ100977 DQ840729 DQ926055 DQ926218 DQ926255 DQ926308 EF177956 EF178021 GQ267831 U96395 X99352 Y17142 AB063699 AB063849 AB063916 AB067258 AB363156 AF021945 AF129753 AF471200 AF471528 AF471540 AF471541 AF471542 AF471546 AJ300788 AJ389185 AJ556647 AJ556667 AJ579161 AY554174 AY554177 AY554178 AY573190 AY640527 AY640562 AY846273 AY971106 D83679 DQ065693 DQ535269 DQ535318 DQ535335 DQ535453 DQ535464 DQ535482 DQ926153 DQ926492 EF178117 EF178127 EF178131 EU835555 FJ195515 FJ492899 FN563769 GU570345 GU570350 HQ378386 JF806284 U97244 X99353 L33033 Z11950 BC033178 TSC_hg19_v1_chr14_-_107199472	-50111	-	DQ205161 AY392971 AF085654 X58399 X58398 BC002792 TSC_hg19_v1_chr14_-_107259820	10309	-	None	None	None	None	None	None	Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC033178|IGHG3|3502|immunoglobulin heavy constant gamma 3 (G3m marker)##X58399|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##X58398|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##BC002792|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)	0.786559	CTCF.p2:-2:0.787
chr14	35342996	35343177	reg1033046.p2	3.549	+	TSC_hg19_v1_chr14_-_35183800 NM_001243645 AF134803 BC022364 BC022876 BC025683 NM_138638	-159211	-	BC011444 AK314157 NM_021914 AF134802	-160098	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	-243731	-	AB593178 TSC_hg19_v1_chr14_+_35343416 BC039097	390	+	TSC_hg19_v1_chr14_-_35344080 BC020636	1022	-	AF086397 AF213467 TSC_hg19_v1_chr14_-_35344486	1383	-	NM_001243645|CFL2|1073|cofilin 2 (muscle)##AF134803|CFL2|1073|cofilin 2 (muscle)##BC022364|CFL2|1073|cofilin 2 (muscle)##BC022876|CFL2|1073|cofilin 2 (muscle)##BC025683|CFL2|1073|cofilin 2 (muscle)##NM_138638|CFL2|1073|cofilin 2 (muscle)##BC011444|CFL2|1073|cofilin 2 (muscle)##AK314157|CFL2|1073|cofilin 2 (muscle)##NM_021914|CFL2|1073|cofilin 2 (muscle)##AF134802|CFL2|1073|cofilin 2 (muscle)##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6##BC020636|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##AF086397|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A##AF213467|BAZ1A|11177|bromodomain adjacent to zinc finger domain, 1A	0.0	
chr18	20910529	20910595	reg1033253.p1	3.549	+	BC037218 NM_138375	-174774	+	EF028204 NM_001100619	-194836	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-396747	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	107309	-	AK057292 NM_003831	122224	+	TSC_hg19_v1_chr18_+_21033250 AK303938 BC028360	122684	+	BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241##AK057292|RIOK3|8780|RIO kinase 3 (yeast)##NM_003831|RIOK3|8780|RIO kinase 3 (yeast)##AK303938|RIOK3|8780|RIO kinase 3 (yeast)##BC028360|RIOK3|8780|RIO kinase 3 (yeast)	0.0	
chr2	135040692	135040804	reg1036567.p2	3.549	+	NM_002410 D17716 AF113921	-28863	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-714710	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-861394	-	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	435808	-	AK125008 NM_138326 BC016018 BC107420 AB071418	555470	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	635649	+	NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2	0.0	
chr21	43845756	43845936	reg1029989.p1	3.549	+	NM_001001895 NM_001243467 NM_018961 AK313367 AK301279 BC028138 AJ277750 BC069357 BC069483 BC069577 BC069511 TSC_hg19_v1_chr21_+_43824026 AK308151 AF520809 AF521702 CU686870	-21834	+	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	-29685	-	M12075 BC032811 NM_003225 X00474 X52003	-59224	-	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	70534	-	AJ269529 NM_018964	73895	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	88157	+	NM_001001895|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_001243467|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##NM_018961|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK313367|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK301279|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC028138|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AJ277750|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069357|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069483|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069577|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##BC069511|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AK308151|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF520809|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AF521702|UBASH3A|53347|ubiquitin associated and SH3 domain containing A##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1	0.0	
chr2	71146808	71146874	reg1002514.p1	3.549	+	TSC_hg19_v1_chr2_+_71127738 BC006336 AB527952 BT007035	-19103	+	TSC_hg19_v1_chr2_+_71127724 NM_012476 Y17791	-19122	+	TSC_hg19_v1_chr2_+_71127705 AB593145	-19138	+	AK291121 NM_001692 BC063411 AK313194 AK301542 BC035978 M25809 AK223151 CU687698 CU690248	16201	+	BC035234 NM_001115116 NM_024933	58733	+	BC010656 AK074840 TSC_hg19_v1_chr2_-_71219046	72190	-	BC006336|VAX2|25806|ventral anterior homeobox 2##BT007035|VAX2|25806|ventral anterior homeobox 2##NM_012476|VAX2|25806|ventral anterior homeobox 2##Y17791|VAX2|25806|ventral anterior homeobox 2##AB593145|VAX2|25806|ventral anterior homeobox 2##AK291121|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##NM_001692|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC063411|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK313194|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK301542|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC035978|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##M25809|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##AK223151|ATP6V1B1|525|ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1##BC035234|ANKRD53|79998|ankyrin repeat domain 53##NM_001115116|ANKRD53|79998|ankyrin repeat domain 53##NM_024933|ANKRD53|79998|ankyrin repeat domain 53##BC010656|TEX261|113419|testis expressed 261##AK074840|TEX261|113419|testis expressed 261	0.0	
chr5	60435090	60435196	reg1037930.p1	3.549	+	TSC_hg19_v1_chr5_+_60241003 AK026051 NM_174889 AF087990 AK291296 BC001753 BC070357 BC033965 AB183433	-194131	+	AB527753 BT020021 CR536563 TSC_hg19_v1_chr5_-_60240898 U28413 AK056931 AK304610 AK314511 BC009793 AK290726 AK294856 NM_000082	-194273	-	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	-295072	-	BC146876 BC146881 BC014242 BC047489 TSC_hg19_v1_chr5_-_60458209	23035	-	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	23124	-	TSC_hg19_v1_chr5_+_60628085 NM_020928	192955	+	AK026051|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_174889|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AF087990|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AK291296|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC001753|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC070357|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC033965|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AB183433|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BT020021|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##CR536563|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##U28413|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK056931|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK304610|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK314511|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##BC009793|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK290726|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK294856|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##NM_000082|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7##BC146876|C5orf43|643155|chromosome 5 open reading frame 43##BC146881|C5orf43|643155|chromosome 5 open reading frame 43##BC014242|C5orf43|643155|chromosome 5 open reading frame 43##BC047489|C5orf43|643155|chromosome 5 open reading frame 43##BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6	0.0	
chr6	149400847	149400948	reg1023786.p2	3.549	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-332688	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-736706	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-736907	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	238206	+	AK315038 NM_015093 AK307650	238544	+	AY340238 NM_001002255 BC130305 HQ258040	320611	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr12	104976641	104976769	reg1038750.p1	3.548	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-125618	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-125897	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-125934	+	TSC_hg19_v1_chr12_+_105153261 AF131762	176572	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	345558	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	403385	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.0	
chr1	237977746	237977871	reg1038593.p1	3.548	+	NM_001035 X98330 Y08218	-772035	+	TSC_hg19_v1_chr1_+_236958699 U75743 U71285 BC130616 BC136440 BC144095 BC144097 BC144098	-1018973	+	TSC_hg19_v1_chr1_+_236958611 AK299904 NM_000254 AK307390 U73338 AK294270	-1019231	+	AK314151 NM_021186	76413	-	TSC_hg19_v1_chr1_+_239550016 AK056349	1572134	+	AF279779 NM_000740	1814564	+	NM_001035|RYR2|6262|ryanodine receptor 2 (cardiac)##X98330|RYR2|6262|ryanodine receptor 2 (cardiac)##Y08218|RYR2|6262|ryanodine receptor 2 (cardiac)##U75743|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U71285|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC130616|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC136440|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144095|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144097|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##BC144098|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK299904|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##NM_000254|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK307390|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##U73338|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK294270|MTR|4548|5-methyltetrahydrofolate-homocysteine methyltransferase##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3	0.987185	CTCF.p2:3:0.987
chr14	23182492	23182597	reg1042941.p2	3.548	+	TSC_hg19_v1_chr14_+_23067208 AK022878 NM_022060 AX721056 BC024779 AK298127 AK301315 AK293198	-115355	+	BC007403 TSC_hg19_v1_chr14_-_23058122 D15057 AK223129 NM_001344	-124410	-	CR407682 CR542204 DQ892868 DQ896117 TSC_hg19_v1_chr14_-_23058102 BC009798	-124458	-	BC112331 NM_005015 TSC_hg19_v1_chr14_+_23235896 AK294849 AK298249 BC001669 X80695 BX248295 BX248001	53301	+	TSC_hg19_v1_chr14_-_23284568 AK025377	102035	-	BC003062 BC010107 TSC_hg19_v1_chr14_-_23284645 AK314351 AK301219	102088	-	AK022878|ABHD4|63874|abhydrolase domain containing 4##NM_022060|ABHD4|63874|abhydrolase domain containing 4##BC024779|ABHD4|63874|abhydrolase domain containing 4##AK298127|ABHD4|63874|abhydrolase domain containing 4##AK301315|ABHD4|63874|abhydrolase domain containing 4##AK293198|ABHD4|63874|abhydrolase domain containing 4##BC007403|DAD1|1603|defender against cell death 1##D15057|DAD1|1603|defender against cell death 1##AK223129|DAD1|1603|defender against cell death 1##NM_001344|DAD1|1603|defender against cell death 1##CR407682|DAD1|1603|defender against cell death 1##CR542204|DAD1|1603|defender against cell death 1##DQ892868|DAD1|1603|defender against cell death 1##DQ896117|DAD1|1603|defender against cell death 1##BC009798|DAD1|1603|defender against cell death 1##BC112331|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##NM_005015|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK294849|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK298249|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BC001669|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##X80695|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248295|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##BX248001|OXA1L|5018|oxidase (cytochrome c) assembly 1-like##AK025377|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC003062|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BC010107|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK314351|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AK301219|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7	0.0	
chr2	100794650	100794739	reg1038901.p1	3.548	+	BC036895 TSC_hg19_v1_chr2_-_100759026 NM_002285	-35691	-	TSC_hg19_v1_chr2_-_100722359 AK297407 AK092327 AX747484	-72236	-	TSC_hg19_v1_chr2_-_100722267 AK308645	-72426	-	DQ020495 NM_198461	144500	-	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	239403	-	AB164464 NM_001011717	292249	+	BC036895|AFF3|3899|AF4/FMR2 family, member 3##NM_002285|AFF3|3899|AF4/FMR2 family, member 3##AK297407|AFF3|3899|AF4/FMR2 family, member 3##AK092327|AFF3|3899|AF4/FMR2 family, member 3##AK308645|AFF3|3899|AF4/FMR2 family, member 3##DQ020495|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##NM_198461|LONRF2|164832|LON peptidase N-terminal domain and ring finger 2##BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S	0.975143	CTCF.p2:0:0.975
chr22	38326808	38326906	reg1032440.p1	3.548	+	TSC_hg19_v1_chr22_+_38302345 AJ496196 CR456437 AB463117 BC142605 BC143050 CU013036 CU013324 AL834373	-24459	+	TSC_hg19_v1_chr22_+_38302165 NM_033386	-24728	+	AL357455 CU674548 CU688616 TSC_hg19_v1_chr22_+_38245452 DQ891842 DQ893595 DQ895030 EU176311 AK093540 AX748192	-81389	+	CR456440 BC031998 AK057349 NM_032561 NM_001207062	22747	-	TSC_hg19_v1_chr22_+_38349705 NM_021974 BC003582 AK094034 AK311128 AK311831 AX748424 CR456546 CU013146 CU013434 AB463187 CR457021	22875	+	BT020029 CR536571 AB489148 CU013183 CU013471 CU678224 DQ893172 DQ896471 TSC_hg19_v1_chr22_-_38379842	52965	-	AJ496196|MICALL1|85377|MICAL-like 1##CR456437|MICALL1|85377|MICAL-like 1##BC142605|MICALL1|85377|MICAL-like 1##BC143050|MICALL1|85377|MICAL-like 1##AL834373|MICALL1|85377|MICAL-like 1##NM_033386|MICALL1|85377|MICAL-like 1##AL357455|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ891842|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ893595|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##DQ895030|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##EU176311|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##AK093540|EIF3L|51386|eukaryotic translation initiation factor 3, subunit L##CR456440|C22orf23|84645|chromosome 22 open reading frame 23##BC031998|C22orf23|84645|chromosome 22 open reading frame 23##AK057349|C22orf23|84645|chromosome 22 open reading frame 23##NM_032561|C22orf23|84645|chromosome 22 open reading frame 23##NM_001207062|C22orf23|84645|chromosome 22 open reading frame 23##NM_021974|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##BC003582|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK094034|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK311128|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##AK311831|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CR456546|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CU013146|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CU013434|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##CR457021|POLR2F|5435|polymerase (RNA) II (DNA directed) polypeptide F##BT020029|SOX10|6663|SRY (sex determining region Y)-box 10##CR536571|SOX10|6663|SRY (sex determining region Y)-box 10##CU013183|SOX10|6663|SRY (sex determining region Y)-box 10##CU013471|SOX10|6663|SRY (sex determining region Y)-box 10##DQ893172|SOX10|6663|SRY (sex determining region Y)-box 10##DQ896471|SOX10|6663|SRY (sex determining region Y)-box 10	0.958155	CTCF.p2:-22:0.958
chr3	108994711	108994803	reg1037657.p1	3.548	+	AK026416 TSC_hg19_v1_chr3_+_108855566	-139194	+	CU690636 BC050307 AK302642 AF084946 BC028680 NM_014429	-157807	-	AF110003 EU832759 GQ129299 AF110002 BC103993 BC103994 AB593147 NM_005459	-322146	-	BC018070 AY283672 NM_138815	40544	-	DQ891225 DQ894410 AK001575 AK299290 AB528636 AK298623 TSC_hg19_v1_chr3_-_109056370 AK022698	61596	-	TSC_hg19_v1_chr3_-_109056388 BC032846 AK290992 NM_018189	61646	-	AK026416|FLJ22763|401081|uncharacterized LOC401081##BC050307|MORC1|27136|MORC family CW-type zinc finger 1##AK302642|MORC1|27136|MORC family CW-type zinc finger 1##AF084946|MORC1|27136|MORC family CW-type zinc finger 1##BC028680|MORC1|27136|MORC family CW-type zinc finger 1##NM_014429|MORC1|27136|MORC family CW-type zinc finger 1##AF110003|GUCA1C|9626|guanylate cyclase activator 1C##EU832759|GUCA1C|9626|guanylate cyclase activator 1C##GQ129299|GUCA1C|9626|guanylate cyclase activator 1C##AF110002|GUCA1C|9626|guanylate cyclase activator 1C##BC103993|GUCA1C|9626|guanylate cyclase activator 1C##BC103994|GUCA1C|9626|guanylate cyclase activator 1C##AB593147|GUCA1C|9626|guanylate cyclase activator 1C##NM_005459|GUCA1C|9626|guanylate cyclase activator 1C##BC018070|DPPA2|151871|developmental pluripotency associated 2##AY283672|DPPA2|151871|developmental pluripotency associated 2##NM_138815|DPPA2|151871|developmental pluripotency associated 2##DQ891225|DPPA4|55211|developmental pluripotency associated 4##DQ894410|DPPA4|55211|developmental pluripotency associated 4##AK001575|DPPA4|55211|developmental pluripotency associated 4##AK299290|DPPA4|55211|developmental pluripotency associated 4##AK298623|DPPA4|55211|developmental pluripotency associated 4##AK022698|DPPA4|55211|developmental pluripotency associated 4##BC032846|DPPA4|55211|developmental pluripotency associated 4##AK290992|DPPA4|55211|developmental pluripotency associated 4##NM_018189|DPPA4|55211|developmental pluripotency associated 4	0.548218	CTCF.p2:-41:0.548
chr3	124449350	124449424	reg1040028.p2	3.548	+	TSC_hg19_v1_chr3_+_124449303 AL080099 AB062285 BC000364 BC007511 EU832341 EU832426 EU921886 EU921887 EU921888 EU921889 EU921890 EU921891 EU921892 EU921893 EU921894 EU921895 AK291306 D86227 D86228 D86230 CR456787 M36661	-71	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	-148	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	-145859	+	TSC_hg19_v1_chr3_-_124605863 AB587397 DQ892778 DQ896025 M35011 AK315429 J05633	156479	-	TSC_hg19_v1_chr3_-_124606213 BC006541 NM_002213 X53002	156824	-	AF286113 AB035807 AY358831 TSC_hg19_v1_chr3_-_124653596 NM_033049	204196	-	AL080099|UMPS|7372|uridine monophosphate synthetase##AB062285|UMPS|7372|uridine monophosphate synthetase##BC000364|UMPS|7372|uridine monophosphate synthetase##BC007511|UMPS|7372|uridine monophosphate synthetase##EU832341|UMPS|7372|uridine monophosphate synthetase##EU832426|UMPS|7372|uridine monophosphate synthetase##EU921886|UMPS|7372|uridine monophosphate synthetase##EU921887|UMPS|7372|uridine monophosphate synthetase##EU921888|UMPS|7372|uridine monophosphate synthetase##EU921889|UMPS|7372|uridine monophosphate synthetase##EU921890|UMPS|7372|uridine monophosphate synthetase##EU921891|UMPS|7372|uridine monophosphate synthetase##EU921892|UMPS|7372|uridine monophosphate synthetase##EU921893|UMPS|7372|uridine monophosphate synthetase##EU921894|UMPS|7372|uridine monophosphate synthetase##EU921895|UMPS|7372|uridine monophosphate synthetase##AK291306|UMPS|7372|uridine monophosphate synthetase##D86227|UMPS|7372|uridine monophosphate synthetase##D86228|UMPS|7372|uridine monophosphate synthetase##D86230|UMPS|7372|uridine monophosphate synthetase##CR456787|UMPS|7372|uridine monophosphate synthetase##M36661|UMPS|7372|uridine monophosphate synthetase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##DQ892778|ITGB5|3693|integrin, beta 5##DQ896025|ITGB5|3693|integrin, beta 5##M35011|ITGB5|3693|integrin, beta 5##AK315429|ITGB5|3693|integrin, beta 5##J05633|ITGB5|3693|integrin, beta 5##BC006541|ITGB5|3693|integrin, beta 5##NM_002213|ITGB5|3693|integrin, beta 5##X53002|ITGB5|3693|integrin, beta 5##AF286113|MUC13|56667|mucin 13, cell surface associated##AB035807|MUC13|56667|mucin 13, cell surface associated##AY358831|MUC13|56667|mucin 13, cell surface associated##NM_033049|MUC13|56667|mucin 13, cell surface associated	0.0	
chr4	11568289	11568408	reg1038610.p1	3.548	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-137816	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-881947	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-1109338	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	1917603	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	1917627	-	AB463932 AF009801 EU446467 BC111966 NM_001189	1977727	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.0	
chr4	95328081	95328256	reg1004297.p2	3.548	+	TSC_hg19_v1_chr4_-_95263988 BC020734 AK290075 NM_014485	-64162	-	TSC_hg19_v1_chr4_+_95129015 NM_001128429 NM_020159 BC045534 AY008271 BC041800	-199054	+	TSC_hg19_v1_chr4_+_95128758 NM_001128430 AK027490 BC017953 AB032948	-199357	+	TSC_hg19_v1_chr4_+_95373030 AY345240 NM_001011513 NM_001011515 NM_001011516 NM_006457	44854	+	TSC_hg19_v1_chr4_+_95373092 BC017902 BC008741 AK291898 AK291624 AK304125 AK296980 AL832157 AL832686 AF061258 AL833151 AL833438	44928	+	BC026029 AM393306 AM393394 AM393485 AM393621 AM393813 DQ890686 DQ893868 AB587372 CU676108 CU679071 AY598328 BT007328 TSC_hg19_v1_chr4_+_95376500	48282	+	BC020734|HPGDS|27306|hematopoietic prostaglandin D synthase##AK290075|HPGDS|27306|hematopoietic prostaglandin D synthase##NM_014485|HPGDS|27306|hematopoietic prostaglandin D synthase##NM_001128429|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_020159|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC045534|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY008271|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC041800|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##NM_001128430|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AK027490|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##BC017953|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AB032948|SMARCAD1|56916|SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1##AY345240|PDLIM5|10611|PDZ and LIM domain 5##NM_001011513|PDLIM5|10611|PDZ and LIM domain 5##NM_001011515|PDLIM5|10611|PDZ and LIM domain 5##NM_001011516|PDLIM5|10611|PDZ and LIM domain 5##NM_006457|PDLIM5|10611|PDZ and LIM domain 5##BC017902|PDLIM5|10611|PDZ and LIM domain 5##BC008741|PDLIM5|10611|PDZ and LIM domain 5##AK291898|PDLIM5|10611|PDZ and LIM domain 5##AK291624|PDLIM5|10611|PDZ and LIM domain 5##AK304125|PDLIM5|10611|PDZ and LIM domain 5##AK296980|PDLIM5|10611|PDZ and LIM domain 5##AL832157|PDLIM5|10611|PDZ and LIM domain 5##AL832686|PDLIM5|10611|PDZ and LIM domain 5##AF061258|PDLIM5|10611|PDZ and LIM domain 5##AL833151|PDLIM5|10611|PDZ and LIM domain 5##AL833438|PDLIM5|10611|PDZ and LIM domain 5##BC026029|PDLIM5|10611|PDZ and LIM domain 5##AM393306|PDLIM5|10611|PDZ and LIM domain 5##AM393394|PDLIM5|10611|PDZ and LIM domain 5##AM393485|PDLIM5|10611|PDZ and LIM domain 5##AM393621|PDLIM5|10611|PDZ and LIM domain 5##AM393813|PDLIM5|10611|PDZ and LIM domain 5##DQ890686|PDLIM5|10611|PDZ and LIM domain 5##DQ893868|PDLIM5|10611|PDZ and LIM domain 5##AY598328|PDLIM5|10611|PDZ and LIM domain 5##BT007328|PDLIM5|10611|PDZ and LIM domain 5	0.0	
chr11	110244040	110244220	reg1030859.p2	3.547	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	-76817	-	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	-280000	+	AK095101 TSC_hg19_v1_chr11_+_109963524	-280602	+	TSC_hg19_v1_chr11_+_110300641 NM_004109 BC010284 BC017063 J03548 AB096243 M18003 M34788 AB463632 BT006681	56586	+	AY496266 TSC_hg19_v1_chr11_-_110582834	338673	-	TSC_hg19_v1_chr11_-_110582887 AB037812	338795	-	BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_004109|FDX1|2230|ferredoxin 1##BC010284|FDX1|2230|ferredoxin 1##BC017063|FDX1|2230|ferredoxin 1##J03548|FDX1|2230|ferredoxin 1##AB096243|FDX1|2230|ferredoxin 1##M18003|FDX1|2230|ferredoxin 1##M34788|FDX1|2230|ferredoxin 1##BT006681|FDX1|2230|ferredoxin 1##AY496266|ARHGAP20|57569|Rho GTPase activating protein 20##AB037812|ARHGAP20|57569|Rho GTPase activating protein 20	0.0	
chr11	71786281	71786445	reg1044375.p1	3.547	+	TSC_hg19_v1_chr11_-_71781122 BC036808	-5249	-	TSC_hg19_v1_chr11_-_71752156 AK290509 AK309041	-34220	-	TSC_hg19_v1_chr11_-_71746967 AB463147	-39386	-	NM_001145307 NM_001145308 NM_001205138 NM_145309	5013	+	BC004165 TSC_hg19_v1_chr11_-_71791566 BC103765 AB210007 BC027493 BC043499 AK307577 Z11583 Z11584 NM_006185 AB621824	5153	-	TSC_hg19_v1_chr11_-_71791740 BC068539	5386	-	BC036808|NUMA1|4926|nuclear mitotic apparatus protein 1##AK290509|NUMA1|4926|nuclear mitotic apparatus protein 1##AK309041|NUMA1|4926|nuclear mitotic apparatus protein 1##NM_001145307|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing##NM_001145308|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing##NM_001205138|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing##NM_145309|LRTOMT|220074|leucine rich transmembrane and 0-methyltransferase domain containing##BC004165|NUMA1|4926|nuclear mitotic apparatus protein 1##BC103765|NUMA1|4926|nuclear mitotic apparatus protein 1##AB210007|NUMA1|4926|nuclear mitotic apparatus protein 1##BC027493|NUMA1|4926|nuclear mitotic apparatus protein 1##BC043499|NUMA1|4926|nuclear mitotic apparatus protein 1##AK307577|NUMA1|4926|nuclear mitotic apparatus protein 1##Z11583|NUMA1|4926|nuclear mitotic apparatus protein 1##Z11584|NUMA1|4926|nuclear mitotic apparatus protein 1##NM_006185|NUMA1|4926|nuclear mitotic apparatus protein 1##BC068539|NUMA1|4926|nuclear mitotic apparatus protein 1	0.219385	CTCF.p2:-20:0.219
chr11	93275149	93275323	reg1037425.p1	3.547	+	TSC_hg19_v1_chr11_+_93063782 NM_181645 BC017929	-211393	+	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	-344151	-	TSC_hg19_v1_chr11_-_92930978 CU690400	-344249	-	AF197137 TSC_hg19_v1_chr11_-_93276558 BC031564 NM_020179	1299	-	TSC_hg19_v1_chr11_+_93394847 NM_033395 BC015989 BC017394	119598	+	AB051518 TSC_hg19_v1_chr11_+_93394877	119653	+	NM_181645|CCDC67|159989|coiled-coil domain containing 67##BC017929|CCDC67|159989|coiled-coil domain containing 67##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##AF197137|C11orf75|56935|chromosome 11 open reading frame 75##BC031564|C11orf75|56935|chromosome 11 open reading frame 75##NM_020179|C11orf75|56935|chromosome 11 open reading frame 75##NM_033395|KIAA1731|85459|KIAA1731##BC015989|KIAA1731|85459|KIAA1731##BC017394|KIAA1731|85459|KIAA1731##AB051518|KIAA1731|85459|KIAA1731	0.0	
chr12	123548240	123548320	reg1035462.p2	3.547	+	AB040953 TSC_hg19_v1_chr12_-_123466210	-82048	-	TSC_hg19_v1_chr12_+_123465384 AK027285	-82864	+	EU624491 AF267748 TSC_hg19_v1_chr12_+_123465249 AB035384 AK315759 BC001958 BC015569	-83115	+	BC141813 TSC_hg19_v1_chr12_-_123590060	41775	-	NM_020845	46694	-	AB040890 TSC_hg19_v1_chr12_-_123635595	87218	-	AB040953|ABCB9|23457|ATP-binding cassette, sub-family B (MDR/TAP), member 9##AK027285|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##EU624491|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##AF267748|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##AB035384|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##AK315759|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##BC001958|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##BC015569|ARL6IP4|51329|ADP-ribosylation-like factor 6 interacting protein 4##BC141813|PITPNM2|57605|phosphatidylinositol transfer protein, membrane-associated 2##NM_020845|PITPNM2|57605|phosphatidylinositol transfer protein, membrane-associated 2##AB040890|PITPNM2|57605|phosphatidylinositol transfer protein, membrane-associated 2	0.010431	
chr1	212780474	212780541	reg1029844.p1	3.547	+	NM_001030287	-41832	+	TSC_hg19_v1_chr1_+_212606264 AF173937 NM_013349 AK074431 AK223135 AY762102 BC008823 AB126219 AF049672	-174195	+	TSC_hg19_v1_chr1_-_212588248 AK297200 NM_001198862 AK024066 NM_018252	-192255	-	NM_001040619 NM_001206484 NM_001206488 NM_001674 TSC_hg19_v1_chr1_+_212782102 AK294296	1528	+	AK312998 TSC_hg19_v1_chr1_+_212782105 BC006322 L19871	1600	+	NM_001206486 AB066566 AB078026 AB078027 AB528347 AY313926 AY313927 BT006996 CR450334 DQ892723 DQ895972 AB209032	7900	+	NM_001030287|ATF3|467|activating transcription factor 3##AF173937|NENF|29937|neudesin neurotrophic factor##NM_013349|NENF|29937|neudesin neurotrophic factor##AK074431|NENF|29937|neudesin neurotrophic factor##AK223135|NENF|29937|neudesin neurotrophic factor##AY762102|NENF|29937|neudesin neurotrophic factor##BC008823|NENF|29937|neudesin neurotrophic factor##AB126219|NENF|29937|neudesin neurotrophic factor##AF049672|NENF|29937|neudesin neurotrophic factor##AK297200|TMEM206|55248|transmembrane protein 206##NM_001198862|TMEM206|55248|transmembrane protein 206##AK024066|TMEM206|55248|transmembrane protein 206##NM_018252|TMEM206|55248|transmembrane protein 206##NM_001040619|ATF3|467|activating transcription factor 3##NM_001206484|ATF3|467|activating transcription factor 3##NM_001206488|ATF3|467|activating transcription factor 3##NM_001674|ATF3|467|activating transcription factor 3##AK294296|ATF3|467|activating transcription factor 3##AK312998|ATF3|467|activating transcription factor 3##BC006322|ATF3|467|activating transcription factor 3##L19871|ATF3|467|activating transcription factor 3##NM_001206486|ATF3|467|activating transcription factor 3##AB066566|ATF3|467|activating transcription factor 3##AB078026|ATF3|467|activating transcription factor 3##AB078027|ATF3|467|activating transcription factor 3##AY313926|ATF3|467|activating transcription factor 3##AY313927|ATF3|467|activating transcription factor 3##BT006996|ATF3|467|activating transcription factor 3##CR450334|ATF3|467|activating transcription factor 3##DQ892723|ATF3|467|activating transcription factor 3##DQ895972|ATF3|467|activating transcription factor 3##AB209032|ATF3|467|activating transcription factor 3	0.0	
chr1	58392443	58392611	reg1036172.p1	3.547	+	TSC_hg19_v1_chr1_-_57888785 AK313144	-503699	-	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	-960811	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	-1072019	+	TSC_hg19_v1_chr1_-_58716179 CR933698 AB210012	323655	-	TSC_hg19_v1_chr1_-_58716210 AK095513 NM_021080	323682	-	TSC_hg19_v1_chr1_-_59012387 AF263547 NM_145243 AB048348 BC012915 AK308847	619896	-	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##CR933698|DAB1|1600|disabled homolog 1 (Drosophila)##AB210012|DAB1|1600|disabled homolog 1 (Drosophila)##AK095513|DAB1|1600|disabled homolog 1 (Drosophila)##NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)##NM_145243|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AB048348|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BC012915|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AK308847|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)	0.0	
chr1	90099207	90099304	reg1016289.p3	3.547	+	TSC_hg19_v1_chr1_+_90098707 AK127881 AB081509 BC103929 BC113973	-491	+	NM_032270 TSC_hg19_v1_chr1_+_90098643	-610	+	TSC_hg19_v1_chr1_+_90098630 BC036122	-622	+	TSC_hg19_v1_chr1_+_90286586 NM_001134479	187272	+	TSC_hg19_v1_chr1_+_90286603 AK092238 AX747423	187344	+	TSC_hg19_v1_chr1_+_90287497 NM_018103 BC024159	188203	+	AK127881|LRRC8C|84230|leucine rich repeat containing 8 family, member C##AB081509|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC103929|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC113973|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_032270|LRRC8C|84230|leucine rich repeat containing 8 family, member C##BC036122|LRRC8C|84230|leucine rich repeat containing 8 family, member C##NM_001134479|LRRC8D|55144|leucine rich repeat containing 8 family, member D##AK092238|LRRC8D|55144|leucine rich repeat containing 8 family, member D##NM_018103|LRRC8D|55144|leucine rich repeat containing 8 family, member D##BC024159|LRRC8D|55144|leucine rich repeat containing 8 family, member D	0.0	
chr20	37521880	37522038	reg1002353.p3	3.547	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	-87605	+	BC038402 NM_024855 TSC_hg19_v1_chr20_+_37377109 AK022847	-144847	+	TSC_hg19_v1_chr20_+_37353128 AK055051 BC053582	-168800	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	33030	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	33109	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	69030	+	AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC038402|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##NM_024855|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK022847|ACTR5|79913|ARP5 actin-related protein 5 homolog (yeast)##AK055051|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##BC053582|SLC32A1|140679|solute carrier family 32 (GABA vesicular transporter), member 1##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35	0.0	
chr21	43285428	43285609	reg1025264.p1	3.547	+	AK027424 TSC_hg19_v1_chr21_-_43187270	-98251	-	TSC_hg19_v1_chr21_-_43187213 EU832165 EU832259 BC035755 BC110617 BC110618 AB047783 AJ278016 NM_020639	-98296	-	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	-405435	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	13980	-	BC062323 AL833323 NM_199050	61271	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	88565	-	AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4##NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2	0.0	
chr3	44099948	44100036	reg1041241.p1	3.547	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-367571	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-436479	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-436554	-	AK093476 AX748152 NM_001145030	183385	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	279638	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	279955	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.0	
chr4	154386838	154387014	reg1026692.p1	3.547	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-121051	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-121139	+	TSC_hg19_v1_chr4_+_154178530 BC025417	-208387	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	566	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	218472	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	218504	+	AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC025417|TRIM2|23321|tripartite motif containing 2##NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2	0.0	
chr6	159393292	159393472	reg1007852.p1	3.547	+	NM_001195032	-83764	+	TSC_hg19_v1_chr6_-_159240446 NM_001111077	-152926	-	TSC_hg19_v1_chr6_-_159240401 AK296738	-152969	-	TSC_hg19_v1_chr6_-_159420766 BC035675	27387	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	27437	-	TSC_hg19_v1_chr6_-_159421220 BC050604 NM_031924 AK057931 BC011590	27839	-	NM_001195032|C6orf99|100130967|chromosome 6 open reading frame 99##NM_001111077|EZR|7430|ezrin##AK296738|EZR|7430|ezrin##BC035675|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC050604|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##NM_031924|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057931|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##BC011590|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)	0.0	
chr7	134105377	134105492	reg1034277.p1	3.547	+	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	-103647	-	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	-103811	-	BC104897 BC104899 AK057348 NM_144648	-293357	+	TSC_hg19_v1_chr7_-_134143853 AB209796 BT019859 CR450351 CR542203 CU675153 J04795 DQ890758 DQ892546 DQ893921 DQ895757 M34720 AF328729 J05474 J05017 BC010391 BC005387 X15414	38399	-	TSC_hg19_v1_chr7_-_134143878 AK313439 BC000260 NM_001628 AK311339	38530	-	AF524864 NM_020299 BC008837	106936	+	AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AB209796|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BT019859|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR450351|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR542203|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J04795|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ890758|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ892546|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ893921|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ895757|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##M34720|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF328729|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05474|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05017|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC010391|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC005387|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##X15414|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK313439|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC000260|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001628|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK311339|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)	0.020441	
chr8	102218532	102218632	reg1041041.p2	3.547	+	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	-628	-	TSC_hg19_v1_chr8_-_102217877 NM_001042511	-706	-	BC035233 TSC_hg19_v1_chr8_-_102217845 BC015925 AF125099 AF275802 AF275809 AK290477 BC068524	-889	-	TSC_hg19_v1_chr8_+_102504667 NM_024915 AK296817 AK310221	286083	+	TSC_hg19_v1_chr8_+_102504840 AK023844 AK292853 BC069618 BC069633 BC069638 BC129822 BC129823	286328	+	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	584601	-	NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706##NM_001042511|ZNF706|51123|zinc finger protein 706##BC035233|ZNF706|51123|zinc finger protein 706##BC015925|ZNF706|51123|zinc finger protein 706##AF125099|ZNF706|51123|zinc finger protein 706##AF275802|ZNF706|51123|zinc finger protein 706##AF275809|ZNF706|51123|zinc finger protein 706##AK290477|ZNF706|51123|zinc finger protein 706##BC068524|ZNF706|51123|zinc finger protein 706##NM_024915|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK296817|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK310221|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK023844|GRHL2|79977|grainyhead-like 2 (Drosophila)##AK292853|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069618|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069633|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC069638|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129822|GRHL2|79977|grainyhead-like 2 (Drosophila)##BC129823|GRHL2|79977|grainyhead-like 2 (Drosophila)##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta	0.0	
chr9	127054107	127054215	reg1029635.p1	3.547	+	TSC_hg19_v1_chr9_+_127020588 AL832574	-33571	+	TSC_hg19_v1_chr9_+_127020519 NM_001166168 AK313071	-33638	+	TSC_hg19_v1_chr9_+_127020255 AB026289	-33897	+	TSC_hg19_v1_chr9_+_127054267 NM_001166170 NM_001166171	98	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	471	+	TSC_hg19_v1_chr9_+_127119114 BC042968	65008	+	NM_001166168|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AK313071|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166170|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166171|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr10	11328667	11328785	reg1035712.p2	3.546	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-121234	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-121280	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-121301	+	NM_001080491	245547	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	324910	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	455672	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.0	
chr10	3894747	3894914	reg1029864.p2	3.546	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-67321	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-67519	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-679825	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	973588	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1110684	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1110793	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr10	94000304	94000423	reg1035198.p1	3.546	+	TSC_hg19_v1_chr10_+_93683569 AF038362 NM_003972 BC112201 AJ001017	-316671	+	TSC_hg19_v1_chr10_+_93683526 AK308399	-316847	+	AK315427 BC025966 AK075410 NM_152429	-331143	-	AB023157 NM_001178137 TSC_hg19_v1_chr10_-_94003035	2656	-	TSC_hg19_v1_chr10_-_94050827 BC036444 AK302576 NM_014912	50473	-	TSC_hg19_v1_chr10_+_94050959 AK000452 AK309175 NM_017824 AK294799 BC015480 AB191202 AB529108	50691	+	AF038362|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##NM_003972|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##BC112201|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AJ001017|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AK308399|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AK315427|FGFBP3|143282|fibroblast growth factor binding protein 3##BC025966|FGFBP3|143282|fibroblast growth factor binding protein 3##AK075410|FGFBP3|143282|fibroblast growth factor binding protein 3##NM_152429|FGFBP3|143282|fibroblast growth factor binding protein 3##AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##BC036444|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK302576|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_014912|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK000452|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK309175|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##NM_017824|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK294799|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##BC015480|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AB191202|MARCH5|54708|membrane-associated ring finger (C3HC4) 5	0.0	
chr1	1377091	1377182	reg1004284.p2	3.546	+	NM_022834 NM_199121 TSC_hg19_v1_chr1_+_1371095 AK075366 AK096773 AK291557 BC059409	-6099	+	NM_001146685 TSC_hg19_v1_chr1_+_1361524	-15620	+	BC094869 NM_001145210 NM_001243535 NM_001243536	-20313	-	AK091918 AX747252 NM_001039211	7932	+	TSC_hg19_v1_chr1_+_1407144 AK290586	29998	+	AK097309 TSC_hg19_v1_chr1_+_1407157	30021	+	NM_022834|VWA1|64856|von Willebrand factor A domain containing 1##NM_199121|VWA1|64856|von Willebrand factor A domain containing 1##AK075366|VWA1|64856|von Willebrand factor A domain containing 1##AK096773|VWA1|64856|von Willebrand factor A domain containing 1##AK291557|VWA1|64856|von Willebrand factor A domain containing 1##BC059409|VWA1|64856|von Willebrand factor A domain containing 1##NM_001146685|TMEM88B|643965|transmembrane protein 88B##BC094869|ANKRD65|441869|ankyrin repeat domain 65##NM_001145210|ANKRD65|441869|ankyrin repeat domain 65##NM_001243535|ANKRD65|441869|ankyrin repeat domain 65##NM_001243536|ANKRD65|441869|ankyrin repeat domain 65##AK091918|ATAD3C|219293|ATPase family, AAA domain containing 3C##NM_001039211|ATAD3C|219293|ATPase family, AAA domain containing 3C##AK290586|ATAD3B|83858|ATPase family, AAA domain containing 3B	0.962439	CTCF.p2:4:0.962
chr11	4847865	4847989	reg1032803.p1	3.546	+	BC136877 NM_001004753	-5345	+	NM_001005177	-22318	-	NM_001004752	-56781	-	NM_001004758 BC136932 BC136934	22548	-	NM_001004759	55121	+	BC137062 BC137063 NM_001004749	80653	+	BC136877|OR51F2|119694|olfactory receptor, family 51, subfamily F, member 2##NM_001004753|OR51F2|119694|olfactory receptor, family 51, subfamily F, member 2##NM_001005177|OR52R1|119695|olfactory receptor, family 52, subfamily R, member 1##NM_001004752|OR51F1|256892|olfactory receptor, family 51, subfamily F, member 1##NM_001004758|OR51S1|119692|olfactory receptor, family 51, subfamily S, member 1##BC136932|OR51S1|119692|olfactory receptor, family 51, subfamily S, member 1##BC136934|OR51S1|119692|olfactory receptor, family 51, subfamily S, member 1##NM_001004759|OR51T1|401665|olfactory receptor, family 51, subfamily T, member 1##BC137062|OR51A7|119687|olfactory receptor, family 51, subfamily A, member 7##BC137063|OR51A7|119687|olfactory receptor, family 51, subfamily A, member 7##NM_001004749|OR51A7|119687|olfactory receptor, family 51, subfamily A, member 7	0.90308	CTCF.p2:-12:0.903
chr1	229539512	229539580	reg1031494.p1	3.546	+	NM_145257 BC071609 TSC_hg19_v1_chr1_-_229478768	-60814	-	BC015419 TSC_hg19_v1_chr1_-_229478279 BC039241	-61247	-	AB590449 TSC_hg19_v1_chr1_-_229478238 AK291437	-61315	-	TSC_hg19_v1_chr1_-_229569842 AK096902 AK300697 BC012597 BX648545 J00068 NM_001100	30296	-	AB384686 DQ894268 EU176236 AK092339 AK314431 AX747487 TSC_hg19_v1_chr1_-_229644075 BC020107 AK304861	104489	-	TSC_hg19_v1_chr1_-_229644079 AK001676 NM_018230 AK304061	104554	-	NM_145257|C1orf96|126731|chromosome 1 open reading frame 96##BC071609|C1orf96|126731|chromosome 1 open reading frame 96##BC015419|C1orf96|126731|chromosome 1 open reading frame 96##BC039241|C1orf96|126731|chromosome 1 open reading frame 96##AK291437|C1orf96|126731|chromosome 1 open reading frame 96##AK096902|ACTA1|58|actin, alpha 1, skeletal muscle##AK300697|ACTA1|58|actin, alpha 1, skeletal muscle##BC012597|ACTA1|58|actin, alpha 1, skeletal muscle##BX648545|ACTA1|58|actin, alpha 1, skeletal muscle##J00068|ACTA1|58|actin, alpha 1, skeletal muscle##NM_001100|ACTA1|58|actin, alpha 1, skeletal muscle##DQ894268|NUP133|55746|nucleoporin 133kDa##EU176236|NUP133|55746|nucleoporin 133kDa##AK092339|NUP133|55746|nucleoporin 133kDa##AK314431|NUP133|55746|nucleoporin 133kDa##BC020107|NUP133|55746|nucleoporin 133kDa##AK304861|NUP133|55746|nucleoporin 133kDa##AK001676|NUP133|55746|nucleoporin 133kDa##NM_018230|NUP133|55746|nucleoporin 133kDa##AK304061|NUP133|55746|nucleoporin 133kDa	0.044535	
chr12	794662	794777	reg1038858.p1	3.546	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-22004	-	TSC_hg19_v1_chr12_-_752800 AK298043	-41900	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-42541	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	67437	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	68037	+	BC013629 TSC_hg19_v1_chr12_+_1017145	222363	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr17	28431778	28431915	reg1005292.p2	3.546	+	NM_198529 BX648689 BC137519	-163142	+	AB072358 AB099290 NM_033389 AK296413 AK308887 TSC_hg19_v1_chr17_-_28257199 BC008941 BC068223	-174713	-	AK302745 AK303060 NM_001145053 AK299608	-174950	+	TSC_hg19_v1_chr17_+_28443846 AK297102 AL136806 NM_032141 AK094552 BC062425 AK313963 BC105044 BC105046 BC143417 BC143539 BC046116 BC040118 AF161358 BC016313 AB462988 AM392705 AM392719 CR533555	11995	+	NM_001045	131107	-	BT007018 CU678536 AB463443 AK301948 X92106 TSC_hg19_v1_chr17_-_28619013 BC003616 AK223403 AK312896	187113	-	NM_198529|EFCAB5|374786|EF-hand calcium binding domain 5##BX648689|EFCAB5|374786|EF-hand calcium binding domain 5##BC137519|EFCAB5|374786|EF-hand calcium binding domain 5##AB072358|SSH2|85464|slingshot homolog 2 (Drosophila)##AB099290|SSH2|85464|slingshot homolog 2 (Drosophila)##NM_033389|SSH2|85464|slingshot homolog 2 (Drosophila)##AK296413|SSH2|85464|slingshot homolog 2 (Drosophila)##AK308887|SSH2|85464|slingshot homolog 2 (Drosophila)##BC008941|SSH2|85464|slingshot homolog 2 (Drosophila)##BC068223|SSH2|85464|slingshot homolog 2 (Drosophila)##AK302745|EFCAB5|374786|EF-hand calcium binding domain 5##AK303060|EFCAB5|374786|EF-hand calcium binding domain 5##NM_001145053|EFCAB5|374786|EF-hand calcium binding domain 5##AK299608|EFCAB5|374786|EF-hand calcium binding domain 5##AK297102|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AL136806|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_032141|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK094552|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC062425|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AK313963|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105044|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC105046|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143417|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC143539|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC046116|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC040118|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AF161358|NSRP1|84081|nuclear speckle splicing regulatory protein 1##BC016313|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392705|NSRP1|84081|nuclear speckle splicing regulatory protein 1##AM392719|NSRP1|84081|nuclear speckle splicing regulatory protein 1##CR533555|NSRP1|84081|nuclear speckle splicing regulatory protein 1##NM_001045|SLC6A4|6532|solute carrier family 6 (neurotransmitter transporter, serotonin), member 4##BT007018|BLMH|642|bleomycin hydrolase##AK301948|BLMH|642|bleomycin hydrolase##X92106|BLMH|642|bleomycin hydrolase##BC003616|BLMH|642|bleomycin hydrolase##AK223403|BLMH|642|bleomycin hydrolase##AK312896|BLMH|642|bleomycin hydrolase	0.0	
chr18	43973168	43973259	reg1020265.p1	3.546	+	AK091537 AK122819 AK127467 AX747044 NM_152470	-59027	+	TSC_hg19_v1_chr18_+_43913942 AK055997	-59281	+	TSC_hg19_v1_chr18_+_43754065 AK289738	-219131	+	AK057232 BC047720 NM_001145473 NM_001173129	125827	-	BC041860 AK302484 NM_001145472	166047	-	NM_144612	263782	-	AK091537|RNF165-IT1|147341|RNF165 intronic transcript 1 (non-protein coding)##AK122819|RNF165|494470|ring finger protein 165##AK127467|RNF165|494470|ring finger protein 165##NM_152470|RNF165|494470|ring finger protein 165##AK055997|RNF165|494470|ring finger protein 165##AK289738|C18orf25|147339|chromosome 18 open reading frame 25##AK057232|LOXHD1|125336|lipoxygenase homology domains 1##BC047720|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145473|LOXHD1|125336|lipoxygenase homology domains 1##NM_001173129|LOXHD1|125336|lipoxygenase homology domains 1##BC041860|LOXHD1|125336|lipoxygenase homology domains 1##AK302484|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145472|LOXHD1|125336|lipoxygenase homology domains 1##NM_144612|LOXHD1|125336|lipoxygenase homology domains 1	0.0	
chr18	77748071	77748163	reg1021662.p1	3.546	+	TSC_hg19_v1_chr18_+_77724644 NM_001136180 BC040056 BC017654 BC157848	-23494	+	AK301881 NM_001146343 NM_001146345 NM_025078 TSC_hg19_v1_chr18_-_77711653	-36465	-	TSC_hg19_v1_chr18_-_77711643 BC030140	-36491	-	AF146373 AB528659 AK309098 TSC_hg19_v1_chr18_-_77748548 AF023611 AF023612 BC001046 BC019272 NM_006701 AK314901	353	-	AK308703 TSC_hg19_v1_chr18_-_77793959	45819	-	AK307212 NM_001171967 NM_024805 AK024825 TSC_hg19_v1_chr18_+_77794477 AK311463 AK311239 AF261073 AF439745 BC057772 BC014195 CU680826	46349	+	NM_001136180|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC040056|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC017654|HSBP1L1|440498|heat shock factor binding protein 1-like 1##BC157848|HSBP1L1|440498|heat shock factor binding protein 1-like 1##AK301881|PQLC1|80148|PQ loop repeat containing 1##NM_001146343|PQLC1|80148|PQ loop repeat containing 1##NM_001146345|PQLC1|80148|PQ loop repeat containing 1##NM_025078|PQLC1|80148|PQ loop repeat containing 1##BC030140|PQLC1|80148|PQ loop repeat containing 1##AF146373|TXNL4A|10907|thioredoxin-like 4A##AK309098|TXNL4A|10907|thioredoxin-like 4A##AF023611|TXNL4A|10907|thioredoxin-like 4A##AF023612|TXNL4A|10907|thioredoxin-like 4A##BC001046|TXNL4A|10907|thioredoxin-like 4A##BC019272|TXNL4A|10907|thioredoxin-like 4A##NM_006701|TXNL4A|10907|thioredoxin-like 4A##AK314901|TXNL4A|10907|thioredoxin-like 4A##AK307212|RBFA|79863|ribosome binding factor A (putative)##NM_001171967|RBFA|79863|ribosome binding factor A (putative)##NM_024805|RBFA|79863|ribosome binding factor A (putative)##AK024825|RBFA|79863|ribosome binding factor A (putative)##AK311463|RBFA|79863|ribosome binding factor A (putative)##AK311239|RBFA|79863|ribosome binding factor A (putative)##AF261073|RBFA|79863|ribosome binding factor A (putative)##AF439745|RBFA|79863|ribosome binding factor A (putative)##BC057772|RBFA|79863|ribosome binding factor A (putative)##BC014195|RBFA|79863|ribosome binding factor A (putative)	0.017761	
chr19	44617271	44617357	reg1037859.p1	3.546	+	TSC_hg19_v1_chr19_+_44598513 NM_013398 AF187990 AK025777 AK292500 BC002889 BC051902	-18782	+	TSC_hg19_v1_chr19_+_44576316 AY458845 NM_001037813 CR936662	-41004	+	BC022466 NM_013361 TSC_hg19_v1_chr19_+_44556193 AK292327	-61132	+	TSC_hg19_v1_chr19_-_44617331 BC044807 BC047357	17	-	AK292437 AF187991 TSC_hg19_v1_chr19_+_44617581 NM_013362 AK302106 AK223477	242	+	TSC_hg19_v1_chr19_+_44645709 AK314064 NM_001144824 NM_006630	28397	+	NM_013398|ZNF224|7767|zinc finger protein 224##AF187990|ZNF224|7767|zinc finger protein 224##AK292500|ZNF224|7767|zinc finger protein 224##BC002889|ZNF224|7767|zinc finger protein 224##BC051902|ZNF224|7767|zinc finger protein 224##AY458845|ZNF284|342909|zinc finger protein 284##NM_001037813|ZNF284|342909|zinc finger protein 284##CR936662|ZNF284|342909|zinc finger protein 284##BC022466|ZNF223|7766|zinc finger protein 223##NM_013361|ZNF223|7766|zinc finger protein 223##AK292327|ZNF223|7766|zinc finger protein 223##BC044807|LOC100379224|100379224|uncharacterized LOC100379224##BC047357|LOC100379224|100379224|uncharacterized LOC100379224##AK292437|ZNF225|7768|zinc finger protein 225##AF187991|ZNF225|7768|zinc finger protein 225##NM_013362|ZNF225|7768|zinc finger protein 225##AK302106|ZNF225|7768|zinc finger protein 225##AK223477|ZNF225|7768|zinc finger protein 225##AK314064|ZNF234|10780|zinc finger protein 234##NM_001144824|ZNF234|10780|zinc finger protein 234##NM_006630|ZNF234|10780|zinc finger protein 234	0.0	
chr20	47226263	47226414	reg1036508.p2	3.546	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-811020	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-811586	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1095654	+	AB037836 TSC_hg19_v1_chr20_-_47444291	217948	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	218101	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	311980	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr6	159291031	159291097	reg1034840.p1	3.546	+	TSC_hg19_v1_chr6_-_159240446 NM_001111077	-50608	-	TSC_hg19_v1_chr6_-_159240401 AK296738	-50651	-	AK312597 TSC_hg19_v1_chr6_-_159240398	-50666	-	NM_001195032	18554	+	TSC_hg19_v1_chr6_-_159420766 BC035675	129705	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	129755	-	NM_001111077|EZR|7430|ezrin##AK296738|EZR|7430|ezrin##AK312597|EZR|7430|ezrin##NM_001195032|C6orf99|100130967|chromosome 6 open reading frame 99##BC035675|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)	0.0	
chr9	37211021	37211088	reg1037272.p1	3.546	+	BC005990 TSC_hg19_v1_chr9_+_37120604 AK303193 AK026264 BC022434 AK315128 BC036940	-90471	+	TSC_hg19_v1_chr9_+_37120506 BC034022	-90546	+	NM_032226 TSC_hg19_v1_chr9_+_37120504	-90568	+	TSC_hg19_v1_chr9_+_37422720 AK025978 BC088360 AF113251 AK307325 AK315690 AF113215 AF134895 BC003131 NM_012203 AF146018 AK307902 BC000605 AB528142 AM393403 AM393629	211652	+	BC010007 TSC_hg19_v1_chr9_-_37465267	254206	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	254341	-	BC005990|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK303193|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK026264|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC022434|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK315128|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC036940|ZCCHC7|84186|zinc finger, CCHC domain containing 7##BC034022|ZCCHC7|84186|zinc finger, CCHC domain containing 7##NM_032226|ZCCHC7|84186|zinc finger, CCHC domain containing 7##AK025978|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC088360|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113251|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307325|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK315690|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF113215|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF134895|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC003131|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##NM_012203|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AF146018|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AK307902|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC000605|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393403|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##AM393629|GRHPR|9380|glyoxylate reductase/hydroxypyruvate reductase##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5	0.0	
chr9	41124778	41124856	reg1033012.p1	3.546	+	AK057375 AK292150 NM_033160	-332731	-	NM_001083124	-424527	+	AK302569 NM_001040065 NM_001085452 BC146855	-1239856	+	BC040528 NM_001113541 NM_015667 NM_001242613	202562	-	BC040528 NM_001113541 NM_015667	375861	+	BC019880 TSC_hg19_v1_chr9_-_41955050 BC040170 BC000869 BC015151 AK092305 AX747468 AK095690 BC027338	830097	-	AK057375|ZNF658|26149|zinc finger protein 658##AK292150|ZNF658|26149|zinc finger protein 658##NM_033160|ZNF658|26149|zinc finger protein 658##NM_001083124|FAM75A3|727830|family with sequence similarity 75, member A3##AK302569|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001040065|FAM75A2|642265|family with sequence similarity 75, member A2##NM_001085452|FAM75A1|647060|family with sequence similarity 75, member A1##BC146855|FAM75A2|642265|family with sequence similarity 75, member A2##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001242613|FAM75A4|642629|family with sequence similarity 75, member A4##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7##BC019880|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC015151|MGC21881|389741|uncharacterized locus MGC21881##AK092305|MGC21881|389741|uncharacterized locus MGC21881##AK095690|MGC21881|389741|uncharacterized locus MGC21881##BC027338|MGC21881|389741|uncharacterized locus MGC21881	0.397076	CTCF.p2:1:0.397
chrX	119619989	119620101	reg1035027.p1	3.546	+	TSC_hg19_v1_chrX_-_119603160 BC002965 S79873 U36336 X77196 AK295038 NM_001122606 NM_002294 NM_013995	-16851	-	TSC_hg19_v1_chrX_-_119603152 AK291090 AK293931	-16900	-	TSC_hg19_v1_chrX_-_119603122 J04183	-16945	-	AY365125 AF212995 TSC_hg19_v1_chrX_-_119694635 AK123688	74537	-	TSC_hg19_v1_chrX_-_119694758 BX537787 BX647096 CR936722 NM_001079872	74722	-	TSC_hg19_v1_chrX_-_119694954 BX537641	74873	-	BC002965|LAMP2|3920|lysosomal-associated membrane protein 2##S79873|LAMP2|3920|lysosomal-associated membrane protein 2##U36336|LAMP2|3920|lysosomal-associated membrane protein 2##X77196|LAMP2|3920|lysosomal-associated membrane protein 2##AK295038|LAMP2|3920|lysosomal-associated membrane protein 2##NM_001122606|LAMP2|3920|lysosomal-associated membrane protein 2##NM_002294|LAMP2|3920|lysosomal-associated membrane protein 2##NM_013995|LAMP2|3920|lysosomal-associated membrane protein 2##AK291090|LAMP2|3920|lysosomal-associated membrane protein 2##AK293931|LAMP2|3920|lysosomal-associated membrane protein 2##J04183|LAMP2|3920|lysosomal-associated membrane protein 2##AY365125|CUL4B|8450|cullin 4B##AF212995|CUL4B|8450|cullin 4B##AK123688|CUL4B|8450|cullin 4B##BX537787|CUL4B|8450|cullin 4B##BX647096|CUL4B|8450|cullin 4B##CR936722|CUL4B|8450|cullin 4B##NM_001079872|CUL4B|8450|cullin 4B##BX537641|CUL4B|8450|cullin 4B	0.516817	CTCF.p2:-2:0.517
chr10	52383988	52384169	reg1033900.p1	3.545	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	-375	-	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-375738	-	NM_018232	-546193	+	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	115632	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	261315	-	TSC_hg19_v1_chr10_-_52645440 BC054873 AK000324 NM_001198818 NM_001198819 NM_001198820 NM_014576 NM_138932 NM_138933	261357	-	AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor##BC054873|A1CF|29974|APOBEC1 complementation factor##AK000324|A1CF|29974|APOBEC1 complementation factor##NM_001198818|A1CF|29974|APOBEC1 complementation factor##NM_001198819|A1CF|29974|APOBEC1 complementation factor##NM_001198820|A1CF|29974|APOBEC1 complementation factor##NM_014576|A1CF|29974|APOBEC1 complementation factor##NM_138932|A1CF|29974|APOBEC1 complementation factor##NM_138933|A1CF|29974|APOBEC1 complementation factor	0.0	
chr1	114970865	114970978	reg1034266.p1	3.545	+	BC044948 NM_001253772	-274450	-	AK056448 NM_205848	-275860	-	AY358954 NM_020190 AY464015 AK092766 AX747716 AK075369 TSC_hg19_v1_chr1_+_114522099 AK297902 AF201945 AK223221 BC009920 AK222471 AK075479 AK075353 AK075544 AB590196 DQ892781 DQ896028 CU679529	-448838	+	TSC_hg19_v1_chr1_-_115053724 AB384564 AB029036	82789	-	TSC_hg19_v1_chr1_-_115053767 AF119043 AF220136 AF220137 NM_015906 NM_033020	82857	-	AB451245 AB451369 AB528339 AF081788 BT019390 CR542037 CU675083 DQ892529 EU176700 EU832613 EU832684 TSC_hg19_v1_chr1_-_115124237 BC005285 BC012623 BC039238 AK222637 AK313141 BC022880 AB020623 NM_005872	153322	-	BC044948|SYT6|148281|synaptotagmin VI##NM_001253772|SYT6|148281|synaptotagmin VI##AK056448|SYT6|148281|synaptotagmin VI##NM_205848|SYT6|148281|synaptotagmin VI##AY358954|OLFML3|56944|olfactomedin-like 3##NM_020190|OLFML3|56944|olfactomedin-like 3##AY464015|OLFML3|56944|olfactomedin-like 3##AK092766|OLFML3|56944|olfactomedin-like 3##AK075369|OLFML3|56944|olfactomedin-like 3##AK297902|OLFML3|56944|olfactomedin-like 3##AF201945|OLFML3|56944|olfactomedin-like 3##AK223221|OLFML3|56944|olfactomedin-like 3##BC009920|OLFML3|56944|olfactomedin-like 3##AK222471|OLFML3|56944|olfactomedin-like 3##AK075479|OLFML3|56944|olfactomedin-like 3##AK075353|OLFML3|56944|olfactomedin-like 3##AK075544|OLFML3|56944|olfactomedin-like 3##DQ892781|OLFML3|56944|olfactomedin-like 3##DQ896028|OLFML3|56944|olfactomedin-like 3##AB029036|TRIM33|51592|tripartite motif containing 33##AF119043|TRIM33|51592|tripartite motif containing 33##AF220136|TRIM33|51592|tripartite motif containing 33##AF220137|TRIM33|51592|tripartite motif containing 33##NM_015906|TRIM33|51592|tripartite motif containing 33##NM_033020|TRIM33|51592|tripartite motif containing 33##AB451245|BCAS2|10286|breast carcinoma amplified sequence 2##AB451369|BCAS2|10286|breast carcinoma amplified sequence 2##AF081788|BCAS2|10286|breast carcinoma amplified sequence 2##BT019390|BCAS2|10286|breast carcinoma amplified sequence 2##CR542037|BCAS2|10286|breast carcinoma amplified sequence 2##DQ892529|BCAS2|10286|breast carcinoma amplified sequence 2##EU176700|BCAS2|10286|breast carcinoma amplified sequence 2##EU832613|BCAS2|10286|breast carcinoma amplified sequence 2##EU832684|BCAS2|10286|breast carcinoma amplified sequence 2##BC005285|BCAS2|10286|breast carcinoma amplified sequence 2##BC012623|BCAS2|10286|breast carcinoma amplified sequence 2##BC039238|BCAS2|10286|breast carcinoma amplified sequence 2##AK222637|BCAS2|10286|breast carcinoma amplified sequence 2##AK313141|BCAS2|10286|breast carcinoma amplified sequence 2##BC022880|BCAS2|10286|breast carcinoma amplified sequence 2##AB020623|BCAS2|10286|breast carcinoma amplified sequence 2##NM_005872|BCAS2|10286|breast carcinoma amplified sequence 2	0.945862	CTCF.p2:-9:0.946
chr14	79766367	79766514	reg1037053.p1	3.545	+	NM_001105250 NM_138970 AK056530 BC059368 BC068469	-20736	+	AB018286 BC152457 NM_004796	-896348	+	TSC_hg19_v1_chr14_+_78266441 NM_001142545 NM_020421 AK299430 BX248292 BC017459 BC058906 AK096919	-1499990	+	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	911464	-	AK292210 NM_000793	930956	-	NM_152446	1639443	-	NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##AB018286|NRXN3|9369|neurexin 3##BC152457|NRXN3|9369|neurexin 3##NM_004796|NRXN3|9369|neurexin 3##NM_001142545|ADCK1|57143|aarF domain containing kinase 1##NM_020421|ADCK1|57143|aarF domain containing kinase 1##AK299430|ADCK1|57143|aarF domain containing kinase 1##BX248292|ADCK1|57143|aarF domain containing kinase 1##BC017459|ADCK1|57143|aarF domain containing kinase 1##BC058906|ADCK1|57143|aarF domain containing kinase 1##AK096919|ADCK1|57143|aarF domain containing kinase 1##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II##NM_152446|CEP128|145508|centrosomal protein 128kDa	0.0	
chr14	97207648	97207828	reg1003999.p1	3.545	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-238954	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-238992	+	TSC_hg19_v1_chr14_+_96968718 NM_001252006 NM_001252007 NM_032632 AK302406 BC036014	-239029	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	55977	+	AK098639 NM_182560	1970211	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	2529879	-	BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##NM_001252006|PAPOLA|10914|poly(A) polymerase alpha##NM_001252007|PAPOLA|10914|poly(A) polymerase alpha##NM_032632|PAPOLA|10914|poly(A) polymerase alpha##AK302406|PAPOLA|10914|poly(A) polymerase alpha##BC036014|PAPOLA|10914|poly(A) polymerase alpha##NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.0	
chr16	50300204	50300383	reg1033370.p1	3.545	+	TSC_hg19_v1_chr16_+_50186838 AK300918 NM_001040284 NM_001040285	-113458	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	-200333	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	-200400	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	183	+	TSC_hg19_v1_chr16_+_50308041 BC039891	7760	+	NM_001114 D25538	21530	+	AK300918|PAPD5|64282|PAP associated domain containing 5##NM_001040284|PAPD5|64282|PAP associated domain containing 5##NM_001040285|PAPD5|64282|PAP associated domain containing 5##AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK093706|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7	0.0	
chr17	58678647	58678782	reg1039829.p1	3.545	+	TSC_hg19_v1_chr17_+_58677710 BC016480 BC042418 BC032826 BC033893 DQ891047 EU176552 BT009780	-1025	+	TSC_hg19_v1_chr17_+_58677553 BC060877 NM_003620 AK312902 AK299773 U78305	-1170	+	AK307666 TSC_hg19_v1_chr17_-_58603582 BC018121 AF017782 D86981 NM_006380	-75177	-	TSC_hg19_v1_chr17_+_58755255 NM_001099432 NM_017679 AK304791 AK225757 BC017390 AK314744 AF361219 BC117275 BC143386 BC143387 AK025510	76499	+	TSC_hg19_v1_chr17_+_59477203 BC052566 NM_005994 AK127429 BC070054	798522	+	TSC_hg19_v1_chr17_+_59477477 U28049	798782	+	BC016480|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC042418|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC032826|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC033893|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##DQ891047|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##EU176552|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BT009780|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##BC060877|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##NM_003620|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK312902|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK299773|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##U78305|PPM1D|8493|protein phosphatase, Mg2+/Mn2+ dependent, 1D##AK307666|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##BC018121|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##AF017782|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##D86981|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##NM_006380|APPBP2|10513|amyloid beta precursor protein (cytoplasmic tail) binding protein 2##NM_001099432|BCAS3|54828|breast carcinoma amplified sequence 3##NM_017679|BCAS3|54828|breast carcinoma amplified sequence 3##AK304791|BCAS3|54828|breast carcinoma amplified sequence 3##AK225757|BCAS3|54828|breast carcinoma amplified sequence 3##BC017390|BCAS3|54828|breast carcinoma amplified sequence 3##AK314744|BCAS3|54828|breast carcinoma amplified sequence 3##AF361219|BCAS3|54828|breast carcinoma amplified sequence 3##BC117275|BCAS3|54828|breast carcinoma amplified sequence 3##BC143386|BCAS3|54828|breast carcinoma amplified sequence 3##BC143387|BCAS3|54828|breast carcinoma amplified sequence 3##AK025510|BCAS3|54828|breast carcinoma amplified sequence 3##BC052566|TBX2|6909|T-box 2##NM_005994|TBX2|6909|T-box 2##BC070054|TBX2|6909|T-box 2##U28049|TBX2|6909|T-box 2	0.070829	
chr17	61513367	61513469	reg1038233.p1	3.545	+	BC144357 TSC_hg19_v1_chr17_+_61271368	-242057	+	NM_025185	-426521	+	AK122947 AK093076 AX747906 BX648705 NM_152598	-627741	-	BC091485 NM_001017917	4772	-	AK095244 NM_001017916 TSC_hg19_v1_chr17_-_61523715 AK301541 AK294403 BC002976 AK303177 AK316606 NM_001915	10218	-	TSC_hg19_v1_chr17_+_61554421 AK296566 AK309514 NM_000789 AK300516 AB208971 J04144	41010	+	BC144357|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##NM_025185|TANC2|26115|tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2##AK122947|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##AK093076|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BX648705|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##NM_152598|MARCH10|162333|membrane-associated ring finger (C3HC4) 10##BC091485|CYB561|1534|cytochrome b-561##NM_001017917|CYB561|1534|cytochrome b-561##AK095244|CYB561|1534|cytochrome b-561##NM_001017916|CYB561|1534|cytochrome b-561##AK301541|CYB561|1534|cytochrome b-561##AK294403|CYB561|1534|cytochrome b-561##BC002976|CYB561|1534|cytochrome b-561##AK303177|CYB561|1534|cytochrome b-561##AK316606|CYB561|1534|cytochrome b-561##NM_001915|CYB561|1534|cytochrome b-561##AK296566|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK309514|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##NM_000789|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AK300516|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##AB208971|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1##J04144|ACE|1636|angiotensin I converting enzyme (peptidyl-dipeptidase A) 1	0.014288	
chr19	3761738	3761827	reg1039831.p1	3.545	+	TSC_hg19_v1_chr19_-_3761636 AB021638 NM_004886	-134	-	BC108906 BC108907 NM_014428	-33409	+	TSC_hg19_v1_chr19_+_3708368 AK091118 AK304462	-53353	+	TSC_hg19_v1_chr19_+_3762669 NM_172251	878	+	BC065273 TSC_hg19_v1_chr19_+_3762671	892	+	AY211277 BC007284 BC018709 BC032512 NM_032753	10431	-	AB021638|APBA3|9546|amyloid beta (A4) precursor protein-binding, family A, member 3##NM_004886|APBA3|9546|amyloid beta (A4) precursor protein-binding, family A, member 3##BC108906|TJP3|27134|tight junction protein 3 (zona occludens 3)##BC108907|TJP3|27134|tight junction protein 3 (zona occludens 3)##NM_014428|TJP3|27134|tight junction protein 3 (zona occludens 3)##AK091118|TJP3|27134|tight junction protein 3 (zona occludens 3)##AK304462|TJP3|27134|tight junction protein 3 (zona occludens 3)##NM_172251|MRPL54|116541|mitochondrial ribosomal protein L54##BC065273|MRPL54|116541|mitochondrial ribosomal protein L54##AY211277|RAX2|84839|retina and anterior neural fold homeobox 2##BC007284|RAX2|84839|retina and anterior neural fold homeobox 2##BC018709|RAX2|84839|retina and anterior neural fold homeobox 2##BC032512|RAX2|84839|retina and anterior neural fold homeobox 2##NM_032753|RAX2|84839|retina and anterior neural fold homeobox 2	0.178022	
chr22	22454799	22454902	reg1031408.p2	3.545	+	TSC_hg19_v1_chr22_+_22385369 AF026922	-69485	+	TSC_hg19_v1_chr22_-_22337185 AK304681 AL833505 AK290997	-117664	-	TSC_hg19_v1_chr22_-_22337164 AF017146 AF053082 BC002432 NM_003935 AK304709	-117703	-	X02422 TSC_hg19_v1_chr22_+_22550141	95279	+	TSC_hg19_v1_chr22_+_22550162 BC023973 AY190823 FJ200244	95328	+	TSC_hg19_v1_chr22_+_22569158 AX810722 AX810705 L29113 AM181372 AY043127 AY043141 AJ408284 AY487924 DQ098689	114414	+	AL833505|TOP3B|8940|topoisomerase (DNA) III beta##AK290997|TOP3B|8940|topoisomerase (DNA) III beta##AF017146|TOP3B|8940|topoisomerase (DNA) III beta##AF053082|TOP3B|8940|topoisomerase (DNA) III beta##BC002432|TOP3B|8940|topoisomerase (DNA) III beta##NM_003935|TOP3B|8940|topoisomerase (DNA) III beta##AK304709|TOP3B|8940|topoisomerase (DNA) III beta##BC023973|IGLV6-57|28778|immunoglobulin lambda variable 6-57	0.997706	CTCF.p2:-5:0.998
chr4	18059364	18059432	reg1036284.p2	3.545	+	AK096181 TSC_hg19_v1_chr4_-_18023379 CU691482 BC037322 AK299939 NM_001166139 NM_153686	-35932	-	AF331796 NM_022346 TSC_hg19_v1_chr4_+_17812610 AB013299 AK022512 BC068467 AF235023 BC143383 BC101476 CU686641	-246787	+	TSC_hg19_v1_chr4_-_17812353 AK056116 NM_017741	-247125	-	AB017168 NM_004787 BC117190 BC143978 AF133270	2195938	+	TSC_hg19_v1_chr4_+_20702080 AK307786 NM_001130727 NM_145048 AK294077 AK297556 AK307355 AK315482 AK291544 AK307092	2642669	+	DQ148492 AK294188 TSC_hg19_v1_chr4_-_20985711	2926231	-	AK096181|LCORL|254251|ligand dependent nuclear receptor corepressor-like##BC037322|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AK299939|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_001166139|LCORL|254251|ligand dependent nuclear receptor corepressor-like##NM_153686|LCORL|254251|ligand dependent nuclear receptor corepressor-like##AF331796|NCAPG|64151|non-SMC condensin I complex, subunit G##NM_022346|NCAPG|64151|non-SMC condensin I complex, subunit G##AB013299|NCAPG|64151|non-SMC condensin I complex, subunit G##AK022512|NCAPG|64151|non-SMC condensin I complex, subunit G##BC068467|NCAPG|64151|non-SMC condensin I complex, subunit G##AF235023|NCAPG|64151|non-SMC condensin I complex, subunit G##BC143383|NCAPG|64151|non-SMC condensin I complex, subunit G##BC101476|NCAPG|64151|non-SMC condensin I complex, subunit G##AK056116|DCAF16|54876|DDB1 and CUL4 associated factor 16##NM_017741|DCAF16|54876|DDB1 and CUL4 associated factor 16##AB017168|SLIT2|9353|slit homolog 2 (Drosophila)##NM_004787|SLIT2|9353|slit homolog 2 (Drosophila)##BC117190|SLIT2|9353|slit homolog 2 (Drosophila)##BC143978|SLIT2|9353|slit homolog 2 (Drosophila)##AF133270|SLIT2|9353|slit homolog 2 (Drosophila)##AK307786|PACRGL|133015|PARK2 co-regulated-like##NM_001130727|PACRGL|133015|PARK2 co-regulated-like##NM_145048|PACRGL|133015|PARK2 co-regulated-like##AK294077|PACRGL|133015|PARK2 co-regulated-like##AK297556|PACRGL|133015|PARK2 co-regulated-like##AK307355|PACRGL|133015|PARK2 co-regulated-like##AK315482|PACRGL|133015|PARK2 co-regulated-like##AK291544|PACRGL|133015|PARK2 co-regulated-like##AK307092|PACRGL|133015|PARK2 co-regulated-like##DQ148492|KCNIP4|80333|Kv channel interacting protein 4##AK294188|KCNIP4|80333|Kv channel interacting protein 4	0.0	
chr4	69041266	69041395	reg1010057.p1	3.545	+	AK122625 NM_207407	-45744	-	AY498712 BC111796 AK292950 AF071882 AK131518 NM_001114387 NM_182606	-212143	-	AK296853 BC125195 BC125196 AB002134 NM_004262 AK290289	-291623	-	AK123556 NM_001129907	42467	-	BC126195 AK310210 AL833167 BX537945 AK290904 NM_182502	70042	-	TSC_hg19_v1_chr4_-_69215804 BC041119 AK056430 NM_001031732 NM_133370	174432	-	AK122625|TMPRSS11F|389208|transmembrane protease, serine 11F##NM_207407|TMPRSS11F|389208|transmembrane protease, serine 11F##AY498712|TMPRSS11A|339967|transmembrane protease, serine 11A##BC111796|TMPRSS11A|339967|transmembrane protease, serine 11A##AK292950|TMPRSS11A|339967|transmembrane protease, serine 11A##AF071882|TMPRSS11A|339967|transmembrane protease, serine 11A##AK131518|TMPRSS11A|339967|transmembrane protease, serine 11A##NM_001114387|TMPRSS11A|339967|transmembrane protease, serine 11A##NM_182606|TMPRSS11A|339967|transmembrane protease, serine 11A##AK296853|TMPRSS11D|9407|transmembrane protease, serine 11D##BC125195|TMPRSS11D|9407|transmembrane protease, serine 11D##BC125196|TMPRSS11D|9407|transmembrane protease, serine 11D##AB002134|TMPRSS11D|9407|transmembrane protease, serine 11D##NM_004262|TMPRSS11D|9407|transmembrane protease, serine 11D##AK290289|TMPRSS11D|9407|transmembrane protease, serine 11D##AK123556|TMPRSS11BNL|401136|TMPRSS11B N terminal-like##NM_001129907|TMPRSS11BNL|401136|TMPRSS11B N terminal-like##BC126195|TMPRSS11B|132724|transmembrane protease, serine 11B##AK310210|TMPRSS11B|132724|transmembrane protease, serine 11B##AL833167|TMPRSS11B|132724|transmembrane protease, serine 11B##BX537945|TMPRSS11B|132724|transmembrane protease, serine 11B##AK290904|TMPRSS11B|132724|transmembrane protease, serine 11B##NM_182502|TMPRSS11B|132724|transmembrane protease, serine 11B##BC041119|YTHDC1|91746|YTH domain containing 1##AK056430|YTHDC1|91746|YTH domain containing 1##NM_001031732|YTHDC1|91746|YTH domain containing 1##NM_133370|YTHDC1|91746|YTH domain containing 1	0.0	
chr5	123982783	123982850	reg1036266.p1	3.545	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1134934	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1223672	-	NM_001136239 AK297992 AF272898 AF272899	-1557972	+	BC131507 AB033107 BC151226 NM_020747	97972	-	NM_001146319 AK316288 AK300154	1712998	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1776027	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.0	
chr5	176127344	176127473	reg1038099.p1	3.545	+	TSC_hg19_v1_chr5_+_176074497 AK024427 BC067105 BC010405 AF174603 CU679699 CU688248	-52856	+	NM_001006616 NM_012171 NM_130465 TSC_hg19_v1_chr5_+_176074470 AY037146	-52978	+	NM_001099408	-69726	+	TSC_hg19_v1_chr5_+_176237521 AK131380 NM_133369 BC157824	110147	+	U51333 BC028129 NM_002115	198915	-	AK304794 BX537376 NM_016290 AK023044 BC032561 BC006078 BC014069 AF349313 NM_001199297 NM_001199298 TSC_hg19_v1_chr5_-_176433806	306180	-	AK024427|TSPAN17|26262|tetraspanin 17##BC067105|TSPAN17|26262|tetraspanin 17##BC010405|TSPAN17|26262|tetraspanin 17##AF174603|TSPAN17|26262|tetraspanin 17##NM_001006616|TSPAN17|26262|tetraspanin 17##NM_012171|TSPAN17|26262|tetraspanin 17##NM_130465|TSPAN17|26262|tetraspanin 17##AY037146|TSPAN17|26262|tetraspanin 17##NM_001099408|EIF4E1B|253314|eukaryotic translation initiation factor 4E family member 1B##AK131380|UNC5A|90249|unc-5 homolog A (C. elegans)##NM_133369|UNC5A|90249|unc-5 homolog A (C. elegans)##BC157824|UNC5A|90249|unc-5 homolog A (C. elegans)##U51333|HK3|3101|hexokinase 3 (white cell)##BC028129|HK3|3101|hexokinase 3 (white cell)##NM_002115|HK3|3101|hexokinase 3 (white cell)##AK304794|UIMC1|51720|ubiquitin interaction motif containing 1##BX537376|UIMC1|51720|ubiquitin interaction motif containing 1##NM_016290|UIMC1|51720|ubiquitin interaction motif containing 1##AK023044|UIMC1|51720|ubiquitin interaction motif containing 1##BC032561|UIMC1|51720|ubiquitin interaction motif containing 1##BC006078|UIMC1|51720|ubiquitin interaction motif containing 1##AF349313|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199297|UIMC1|51720|ubiquitin interaction motif containing 1##NM_001199298|UIMC1|51720|ubiquitin interaction motif containing 1	0.82976	CTCF.p2:25:0.830
chr6	34216344	34216416	reg1005559.p1	3.545	+	AK311680 TSC_hg19_v1_chr6_+_34216344	-30	+	BC015789 NM_145905	-9813	+	TSC_hg19_v1_chr6_+_34205395 M23619	-10985	+	BC047919 TSC_hg19_v1_chr6_-_34216784 BC023627 AK290164	413	-	TSC_hg19_v1_chr6_-_34216832 BC009526 NM_001008703 NM_001008704 NM_178508	483	-	TSC_hg19_v1_chr6_-_34360182 AB463951 BT019984 BT019985 DQ893118 DQ896391 AF062529 AF062530	143821	-	BC015789|HMGA1|3159|high mobility group AT-hook 1##NM_145905|HMGA1|3159|high mobility group AT-hook 1##M23619|HMGA1|3159|high mobility group AT-hook 1##BC047919|C6orf1|221491|chromosome 6 open reading frame 1##BC023627|C6orf1|221491|chromosome 6 open reading frame 1##AK290164|C6orf1|221491|chromosome 6 open reading frame 1##BC009526|C6orf1|221491|chromosome 6 open reading frame 1##NM_001008703|C6orf1|221491|chromosome 6 open reading frame 1##NM_001008704|C6orf1|221491|chromosome 6 open reading frame 1##NM_178508|C6orf1|221491|chromosome 6 open reading frame 1##BT019984|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##BT019985|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##DQ893118|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##DQ896391|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AF062529|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AF062530|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3	0.0	
chr8	12899695	12899875	reg1001948.p1	3.545	+	AB040889 NM_001099677	-30013	+	AK296010 NM_020844	-96619	+	TSC_hg19_v1_chr8_-_12612974 NM_152271	-286781	-	AK299049 NM_001164271	73967	-	DQ092384 DQ092383 TSC_hg19_v1_chr8_-_12990637	90784	-	AK289734 TSC_hg19_v1_chr8_-_12990794 DQ092382 AF026219 BC095415 NM_006094	90991	-	AB040889|KIAA1456|57604|KIAA1456##NM_001099677|KIAA1456|57604|KIAA1456##AK296010|KIAA1456|57604|KIAA1456##NM_020844|KIAA1456|57604|KIAA1456##NM_152271|LONRF1|91694|LON peptidase N-terminal domain and ring finger 1##AK299049|DLC1|10395|deleted in liver cancer 1##NM_001164271|DLC1|10395|deleted in liver cancer 1##DQ092384|DLC1|10395|deleted in liver cancer 1##DQ092383|DLC1|10395|deleted in liver cancer 1##AK289734|DLC1|10395|deleted in liver cancer 1##DQ092382|DLC1|10395|deleted in liver cancer 1##AF026219|DLC1|10395|deleted in liver cancer 1##BC095415|DLC1|10395|deleted in liver cancer 1##NM_006094|DLC1|10395|deleted in liver cancer 1	0.0	
chrX	18701350	18701491	reg1029871.p2	3.545	+	AB464151 AF014459 DQ426892 NM_000330	-11216	-	BC036091 NM_001037343	-241077	+	BC010966 TSC_hg19_v1_chrX_+_18443727 NM_003159 AK307444 AY217744 Y15057	-257691	+	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	7624	+	TSC_hg19_v1_chrX_-_19002476 NM_000292	301042	-	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	439247	-	AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1##BC036091|CDKL5|6792|cyclin-dependent kinase-like 5##NM_001037343|CDKL5|6792|cyclin-dependent kinase-like 5##BC010966|CDKL5|6792|cyclin-dependent kinase-like 5##NM_003159|CDKL5|6792|cyclin-dependent kinase-like 5##AK307444|CDKL5|6792|cyclin-dependent kinase-like 5##AY217744|CDKL5|6792|cyclin-dependent kinase-like 5##Y15057|CDKL5|6792|cyclin-dependent kinase-like 5##NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64	0.0	
chr10	72335921	72336102	reg1035582.p2	3.544	+	TSC_hg19_v1_chr10_+_72238575 NM_014431 AB033100 BC136375 BC136376	-97396	+	TSC_hg19_v1_chr10_-_72201438 BC104976 NM_018055 BC112025	-134560	-	BC033585 TSC_hg19_v1_chr10_-_72201372	-134645	-	BC047695 TSC_hg19_v1_chr10_-_72362497 AK312754	26458	-	BC063043 TSC_hg19_v1_chr10_-_72362518 FJ555237 NM_001083116 NM_005041	26515	-	AB462932 AF358666 AJ345098 NM_080722 NM_139155	96546	+	NM_014431|KIAA1274|27143|KIAA1274##AB033100|KIAA1274|27143|KIAA1274##BC136375|KIAA1274|27143|KIAA1274##BC136376|KIAA1274|27143|KIAA1274##BC104976|NODAL|4838|nodal homolog (mouse)##NM_018055|NODAL|4838|nodal homolog (mouse)##BC112025|NODAL|4838|nodal homolog (mouse)##BC033585|NODAL|4838|nodal homolog (mouse)##BC047695|PRF1|5551|perforin 1 (pore forming protein)##AK312754|PRF1|5551|perforin 1 (pore forming protein)##BC063043|PRF1|5551|perforin 1 (pore forming protein)##FJ555237|PRF1|5551|perforin 1 (pore forming protein)##NM_001083116|PRF1|5551|perforin 1 (pore forming protein)##NM_005041|PRF1|5551|perforin 1 (pore forming protein)##AF358666|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##AJ345098|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_080722|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14##NM_139155|ADAMTS14|140766|ADAM metallopeptidase with thrombospondin type 1 motif, 14	0.0	
chr12	123131464	123131587	reg1034364.p1	3.544	+	TSC_hg19_v1_chr12_+_123011806 BC055410 AK303337 BC150278 D79988 NM_014708	-119721	+	TSC_hg19_v1_chr12_-_123011521 BC008684 AK056114 BX640711 AK056256 BC067773 AB212664 AK094465 NM_023012	-120017	-	TSC_hg19_v1_chr12_-_122985537 AK027702 AK074638 NM_017612	-146007	-	AK290915 BC056419 AY148884 BC063461 BC027965 NM_177551	56347	-	AK290930 BC038955 AK313212 BC047891 D10923 NM_006018	69853	-	BC095506 AY507143 EU809458 GQ129267 GQ129268 AK313955 BC066881 BC066882 BC066883 BC067484 AF345568 AF385431 AF385432 NM_032554	83480	-	AK303337|KNTC1|9735|kinetochore associated 1##BC150278|KNTC1|9735|kinetochore associated 1##D79988|KNTC1|9735|kinetochore associated 1##NM_014708|KNTC1|9735|kinetochore associated 1##BC008684|RSRC2|65117|arginine/serine-rich coiled-coil 2##AK056114|RSRC2|65117|arginine/serine-rich coiled-coil 2##BX640711|RSRC2|65117|arginine/serine-rich coiled-coil 2##AK056256|RSRC2|65117|arginine/serine-rich coiled-coil 2##BC067773|RSRC2|65117|arginine/serine-rich coiled-coil 2##AB212664|RSRC2|65117|arginine/serine-rich coiled-coil 2##AK094465|RSRC2|65117|arginine/serine-rich coiled-coil 2##NM_023012|RSRC2|65117|arginine/serine-rich coiled-coil 2##AK027702|ZCCHC8|55596|zinc finger, CCHC domain containing 8##AK074638|ZCCHC8|55596|zinc finger, CCHC domain containing 8##NM_017612|ZCCHC8|55596|zinc finger, CCHC domain containing 8##AK290915|HCAR2|338442|hydroxycarboxylic acid receptor 2##BC056419|HCAR2|338442|hydroxycarboxylic acid receptor 2##AY148884|HCAR2|338442|hydroxycarboxylic acid receptor 2##BC063461|HCAR2|338442|hydroxycarboxylic acid receptor 2##BC027965|HCAR2|338442|hydroxycarboxylic acid receptor 2##NM_177551|HCAR2|338442|hydroxycarboxylic acid receptor 2##AK290930|HCAR3|8843|hydroxycarboxylic acid receptor 3##BC038955|HCAR3|8843|hydroxycarboxylic acid receptor 3##AK313212|HCAR3|8843|hydroxycarboxylic acid receptor 3##BC047891|HCAR3|8843|hydroxycarboxylic acid receptor 3##D10923|HCAR3|8843|hydroxycarboxylic acid receptor 3##NM_006018|HCAR3|8843|hydroxycarboxylic acid receptor 3##BC095506|HCAR1|27198|hydroxycarboxylic acid receptor 1##AY507143|HCAR1|27198|hydroxycarboxylic acid receptor 1##EU809458|HCAR1|27198|hydroxycarboxylic acid receptor 1##GQ129267|HCAR1|27198|hydroxycarboxylic acid receptor 1##GQ129268|HCAR1|27198|hydroxycarboxylic acid receptor 1##AK313955|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066881|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066882|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC066883|HCAR1|27198|hydroxycarboxylic acid receptor 1##BC067484|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF345568|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF385431|HCAR1|27198|hydroxycarboxylic acid receptor 1##AF385432|HCAR1|27198|hydroxycarboxylic acid receptor 1##NM_032554|HCAR1|27198|hydroxycarboxylic acid receptor 1	0.0	
chr14	50336775	50336921	reg1036367.p1	3.544	+	TSC_hg19_v1_chr14_-_50329567 X02067	-7252	-	TSC_hg19_v1_chr14_-_50319530 AK295010 AK293236 BC006001 BC056687 NM_004713	-17315	-	TSC_hg19_v1_chr14_-_50319497 AK304695 AK308537	-17352	-	TSC_hg19_v1_chr14_+_50359731 NM_001663	22882	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	22970	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	22985	+	X02067|RN7SL2|378706|RNA, 7SL, cytoplasmic 2##AK295010|NEMF|9147|nuclear export mediator factor##AK293236|NEMF|9147|nuclear export mediator factor##BC006001|NEMF|9147|nuclear export mediator factor##BC056687|NEMF|9147|nuclear export mediator factor##NM_004713|NEMF|9147|nuclear export mediator factor##AK304695|NEMF|9147|nuclear export mediator factor##AK308537|NEMF|9147|nuclear export mediator factor##NM_001663|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6	0.0	
chr17	70421487	70421569	reg1043050.p1	3.544	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-304288	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-304358	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-304369	+	AK000477 TSC_hg19_v1_chr17_-_70588944	167415	-	AF331643 TSC_hg19_v1_chr17_-_71088816	667288	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	667295	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr21	36095138	36095242	reg1038837.p2	3.544	+	AF448438 AF448439 NM_053277	-53503	+	BT007363 CU678256 AF303449 U85266 TSC_hg19_v1_chr21_-_35987486 BC002864 AK092184 AX747397 NM_004414 AY325903	-107844	-	NM_203417 U85265	-108446	-	S76350 GU070939 TSC_hg19_v1_chr21_-_36231874	136646	-	S76345 S76346 GU070941 TSC_hg19_v1_chr21_-_36252995	157746	-	TSC_hg19_v1_chr21_-_36259250 EU093088	164082	-	AF448438|CLIC6|54102|chloride intracellular channel 6##AF448439|CLIC6|54102|chloride intracellular channel 6##NM_053277|CLIC6|54102|chloride intracellular channel 6##BT007363|RCAN1|1827|regulator of calcineurin 1##AF303449|RCAN1|1827|regulator of calcineurin 1##U85266|RCAN1|1827|regulator of calcineurin 1##BC002864|RCAN1|1827|regulator of calcineurin 1##AK092184|RCAN1|1827|regulator of calcineurin 1##NM_004414|RCAN1|1827|regulator of calcineurin 1##AY325903|RCAN1|1827|regulator of calcineurin 1##NM_203417|RCAN1|1827|regulator of calcineurin 1##U85265|RCAN1|1827|regulator of calcineurin 1##S76350|RUNX1|861|runt-related transcription factor 1##S76345|RUNX1|861|runt-related transcription factor 1##S76346|RUNX1|861|runt-related transcription factor 1	0.988363	CTCF.p2:-7:0.988
chr3	32434113	32434239	reg1040477.p1	3.544	+	TSC_hg19_v1_chr3_+_32433370 BC010116 AY174113 DQ132881 AK308878	-773	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	-1007	+	TSC_hg19_v1_chr3_+_32280215 BC041390	-153957	+	CR457231 TSC_hg19_v1_chr3_-_32544290	110096	-	TSC_hg19_v1_chr3_-_32544335 AK000403	110157	-	BC002797 TSC_hg19_v1_chr3_-_32544365 NM_017801	110204	-	BC010116|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AY174113|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##DQ132881|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AK308878|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##CR457231|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##AK000403|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##BC002797|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##NM_017801|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6	0.0	
chr3	50649515	50649637	reg1032812.p2	3.544	+	NM_001243926 BC068497	-261	+	TSC_hg19_v1_chr3_-_50649206 AF035947 D83532 BC031590 AF132297 AK313850 NM_013324 NM_145071	-359	-	CU689192 AB528903 BC064354 TSC_hg19_v1_chr3_-_50649104	-484	-	TSC_hg19_v1_chr3_+_50654561 NM_001243925 NM_004635	4985	+	TSC_hg19_v1_chr3_+_50654595 AK290969	5016	+	BC001662 BC010407 TSC_hg19_v1_chr3_+_50654611 BC007591 U09578	5051	+	NM_001243926|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC068497|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AF035947|CISH|1154|cytokine inducible SH2-containing protein##D83532|CISH|1154|cytokine inducible SH2-containing protein##BC031590|CISH|1154|cytokine inducible SH2-containing protein##AF132297|CISH|1154|cytokine inducible SH2-containing protein##AK313850|CISH|1154|cytokine inducible SH2-containing protein##NM_013324|CISH|1154|cytokine inducible SH2-containing protein##NM_145071|CISH|1154|cytokine inducible SH2-containing protein##BC064354|CISH|1154|cytokine inducible SH2-containing protein##NM_001243925|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##NM_004635|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AK290969|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC001662|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC010407|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC007591|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U09578|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3	0.0	
chr4	142418941	142419091	reg1034336.p1	3.544	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-276930	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-276961	+	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	-364485	-	AK290619 NM_000585 NM_172175 BC018149 U14407	138750	+	NM_001101669 NM_003866	1348587	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	1687048	+	AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38	0.0	
chr4	154462711	154462814	reg1036112.p2	3.544	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-75270	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-196887	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-196975	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	142636	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	142668	+	TSC_hg19_v1_chr4_+_154605441 BC033756	142702	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.0	
chr5	43557190	43557278	reg1044289.p1	3.544	+	TSC_hg19_v1_chr5_-_43557180 AF013758 BC005295 AL136920 BC015937 AK308270 NM_006451 NM_182789	-69	-	CU675095 TSC_hg19_v1_chr5_-_43556949	-285	-	TSC_hg19_v1_chr5_-_43556944 DQ891110 EU176558	-306	-	NM_183323	286	-	TSC_hg19_v1_chr5_+_43602824 AK297558 NM_012343 AL831822 BC064402	45605	+	TSC_hg19_v1_chr5_-_43603207 AK096668	45960	-	AF013758|PAIP1|10605|poly(A) binding protein interacting protein 1##BC005295|PAIP1|10605|poly(A) binding protein interacting protein 1##AL136920|PAIP1|10605|poly(A) binding protein interacting protein 1##BC015937|PAIP1|10605|poly(A) binding protein interacting protein 1##AK308270|PAIP1|10605|poly(A) binding protein interacting protein 1##NM_006451|PAIP1|10605|poly(A) binding protein interacting protein 1##NM_182789|PAIP1|10605|poly(A) binding protein interacting protein 1##DQ891110|PAIP1|10605|poly(A) binding protein interacting protein 1##EU176558|PAIP1|10605|poly(A) binding protein interacting protein 1##NM_183323|PAIP1|10605|poly(A) binding protein interacting protein 1##AK297558|NNT|23530|nicotinamide nucleotide transhydrogenase##NM_012343|NNT|23530|nicotinamide nucleotide transhydrogenase##AL831822|NNT|23530|nicotinamide nucleotide transhydrogenase##BC064402|NNT|23530|nicotinamide nucleotide transhydrogenase	0.0	
chr5	6484187	6484296	reg1024622.p2	3.544	+	TSC_hg19_v1_chr5_+_6449114 AK057805	-35052	+	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	-35388	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	-105591	-	TSC_hg19_v1_chr5_-_6633158 AK291144 BC137083 AK298980	148913	-	TSC_hg19_v1_chr5_-_6633411 AK055456 AB255451 NM_001193455 NM_017755	149168	-	NM_001047 TSC_hg19_v1_chr5_+_6633508	149269	+	AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##AK291144|NSUN2|54888|NOP2/Sun domain family, member 2##BC137083|NSUN2|54888|NOP2/Sun domain family, member 2##AK298980|NSUN2|54888|NOP2/Sun domain family, member 2##AK055456|NSUN2|54888|NOP2/Sun domain family, member 2##AB255451|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001193455|NSUN2|54888|NOP2/Sun domain family, member 2##NM_017755|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001047|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)	0.0	
chr7	36938111	36938232	reg1035303.p2	3.544	+	TSC_hg19_v1_chr7_-_36764092 M62840 AK297016 AK308215 BC025698 AK223476 NM_001177506 NM_001177507 NM_001637	-174095	-	BC028678 NM_001100425	-508457	-	TSC_hg19_v1_chr7_+_36429470 BC070066 NM_018685 AK299803 AK291254 AF273437	-508731	+	BC064635 NM_001039459	86519	-	D87457 BC003051 BC077074 TSC_hg19_v1_chr7_-_37025739 AK301151	87549	-	AK291784 NM_001206482	455100	-	M62840|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK297016|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK308215|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC025698|AOAH|313|acyloxyacyl hydrolase (neutrophil)##AK223476|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177506|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001177507|AOAH|313|acyloxyacyl hydrolase (neutrophil)##NM_001637|AOAH|313|acyloxyacyl hydrolase (neutrophil)##BC028678|KIAA0895|23366|KIAA0895##NM_001100425|KIAA0895|23366|KIAA0895##BC070066|ANLN|54443|anillin, actin binding protein##NM_018685|ANLN|54443|anillin, actin binding protein##AK299803|ANLN|54443|anillin, actin binding protein##AK291254|ANLN|54443|anillin, actin binding protein##AF273437|ANLN|54443|anillin, actin binding protein##BC064635|ELMO1|9844|engulfment and cell motility 1##NM_001039459|ELMO1|9844|engulfment and cell motility 1##D87457|ELMO1|9844|engulfment and cell motility 1##BC003051|ELMO1|9844|engulfment and cell motility 1##BC077074|ELMO1|9844|engulfment and cell motility 1##AK301151|ELMO1|9844|engulfment and cell motility 1##AK291784|ELMO1|9844|engulfment and cell motility 1##NM_001206482|ELMO1|9844|engulfment and cell motility 1	0.0	
chr9	140356549	140356730	reg1030162.p2	3.544	+	AY255128 AY255129 AY255130 AY255131 AY255132 NM_001130969 NM_001130970 NM_001130971 NM_001178064 NM_015537 TSC_hg19_v1_chr9_-_140353787	-2837	-	TSC_hg19_v1_chr9_-_140353758 AK074602 BC072412	-2879	-	TSC_hg19_v1_chr9_-_140353612 BC110498	-3007	-	AK125060 AK126267 TSC_hg19_v1_chr9_-_140444881 NM_001098537 NM_152286	88271	-	NM_032477 TSC_hg19_v1_chr9_+_140446353 BC040035 AY232291	89720	+	CU675946 TSC_hg19_v1_chr9_-_140473350 AK307180 BC003123 BC016349 BC017335	116651	-	AY255128|NELF|26012|nasal embryonic LHRH factor##AY255129|NELF|26012|nasal embryonic LHRH factor##AY255130|NELF|26012|nasal embryonic LHRH factor##AY255131|NELF|26012|nasal embryonic LHRH factor##AY255132|NELF|26012|nasal embryonic LHRH factor##NM_001130969|NELF|26012|nasal embryonic LHRH factor##NM_001130970|NELF|26012|nasal embryonic LHRH factor##NM_001130971|NELF|26012|nasal embryonic LHRH factor##NM_001178064|NELF|26012|nasal embryonic LHRH factor##NM_015537|NELF|26012|nasal embryonic LHRH factor##AK074602|NELF|26012|nasal embryonic LHRH factor##BC072412|NELF|26012|nasal embryonic LHRH factor##BC110498|NELF|26012|nasal embryonic LHRH factor##AK125060|PNPLA7|375775|patatin-like phospholipase domain containing 7##AK126267|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_001098537|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_152286|PNPLA7|375775|patatin-like phospholipase domain containing 7##NM_032477|MRPL41|64975|mitochondrial ribosomal protein L41##BC040035|MRPL41|64975|mitochondrial ribosomal protein L41##AY232291|MRPL41|64975|mitochondrial ribosomal protein L41##AK307180|WDR85|92715|WD repeat domain 85##BC003123|WDR85|92715|WD repeat domain 85##BC016349|WDR85|92715|WD repeat domain 85##BC017335|WDR85|92715|WD repeat domain 85	0.0	
chr10	79561330	79561415	reg1033808.p1	3.543	+	BC009695 AK098326 TSC_hg19_v1_chr10_-_79397567 BC062659 BC024965 NM_001014797 NM_001161352 NM_001161353 NM_002247	-163809	-	U13913 BC137115 BC137137 BC144496 CR627384 TSC_hg19_v1_chr10_-_79397499	-163886	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	-163966	-	TSC_hg19_v1_chr10_-_79628871 BC117695	67537	-	AB384502 NM_004747 AB011155 BC146794 TSC_hg19_v1_chr10_-_79686514	125030	-	AF021351 AY091459 AB384941 TSC_hg19_v1_chr10_-_79789272 BC041089 AK300329	227849	-	BC009695|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC062659|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC024965|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001014797|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161352|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_001161353|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##NM_002247|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U13913|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137115|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC137137|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC144496|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##BC117695|DLG5|9231|discs, large homolog 5 (Drosophila)##NM_004747|DLG5|9231|discs, large homolog 5 (Drosophila)##AB011155|DLG5|9231|discs, large homolog 5 (Drosophila)##BC146794|DLG5|9231|discs, large homolog 5 (Drosophila)##AF021351|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AY091459|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC041089|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##AK300329|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa	0.016583	
chr11	108338376	108338452	reg1033152.p2	3.543	+	BC059411 BC029536 AK303096 NM_152587	-172	-	TSC_hg19_v1_chr11_+_108093793 AB209133 U33841	-244617	+	NM_000051	-244856	+	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	30781	-	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	125990	-	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	197400	+	BC029536|C11orf65|160140|chromosome 11 open reading frame 65##AK303096|C11orf65|160140|chromosome 11 open reading frame 65##NM_152587|C11orf65|160140|chromosome 11 open reading frame 65##AB209133|ATM|472|ataxia telangiectasia mutated##U33841|ATM|472|ataxia telangiectasia mutated##NM_000051|ATM|472|ataxia telangiectasia mutated##AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10	0.0	
chr12	113377859	113377978	reg1040162.p2	3.543	+	AF063613 TSC_hg19_v1_chr12_+_113376306	-1578	+	TSC_hg19_v1_chr12_+_113376245 AK000608 NM_006187 BC113746 BC012015 AK292949	-1668	+	TSC_hg19_v1_chr12_+_113376159 AB044545	-1821	+	TSC_hg19_v1_chr12_+_113416323 NM_001032731 NM_002535 NM_016817 BC010625 BC053870 BC023637 AK292906 BC069052 BC049215 AK292796 M87284 M87434 AB590925 CU690608	38422	+	NM_004416 BC048216	117772	+	CU676985 DQ892315 EU176685 EU832646 EU832723 AB384786 BC093724 BC143258 BC143261 BC143262 BC014420 TSC_hg19_v1_chr12_-_113573548 AK309562 NM_001193521	195494	-	AF063613|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##AK000608|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##NM_006187|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##BC113746|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##BC012015|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##AK292949|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##AB044545|OAS3|4940|2'-5'-oligoadenylate synthetase 3, 100kDa##NM_001032731|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_002535|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_016817|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC010625|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC053870|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC023637|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292906|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC069052|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##BC049215|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##AK292796|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87284|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##M87434|OAS2|4939|2'-5'-oligoadenylate synthetase 2, 69/71kDa##NM_004416|DTX1|1840|deltex homolog 1 (Drosophila)##BC048216|DTX1|1840|deltex homolog 1 (Drosophila)##DQ892315|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU176685|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832646|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##EU832723|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC093724|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143258|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143261|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC143262|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##BC014420|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##AK309562|RASAL1|8437|RAS protein activator like 1 (GAP1 like)##NM_001193521|RASAL1|8437|RAS protein activator like 1 (GAP1 like)	0.0	
chr12	131596760	131596883	reg1038220.p1	3.543	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-158368	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-240110	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-240196	+	TSC_hg19_v1_chr12_+_132195623 BC142980	598792	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	598835	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	716145	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.061424	
chr18	3586733	3586913	reg1010352.p4	3.543	+	NM_173211	-133052	+	TSC_hg19_v1_chr18_+_3451599 NM_170695 NM_173210 AK307230 BC031268	-135192	+	NM_173209 NM_173208 TSC_hg19_v1_chr18_+_3450174 NM_003244 AK309471 X89750	-136743	+	TSC_hg19_v1_chr18_+_3594077 AK093095 AX747919 BC137437	7319	+	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	258507	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	287461	-	NM_173211|TGIF1|7050|TGFB-induced factor homeobox 1##NM_170695|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173210|TGIF1|7050|TGFB-induced factor homeobox 1##BC031268|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173209|TGIF1|7050|TGFB-induced factor homeobox 1##NM_173208|TGIF1|7050|TGFB-induced factor homeobox 1##NM_003244|TGIF1|7050|TGFB-induced factor homeobox 1##AK309471|TGIF1|7050|TGFB-induced factor homeobox 1##X89750|TGIF1|7050|TGFB-induced factor homeobox 1##AK093095|FLJ35776|649446|uncharacterized LOC649446##BC137437|FLJ35776|649446|uncharacterized LOC649446##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1	0.0	
chr20	48808363	48808540	reg1028056.p1	3.543	+	TSC_hg19_v1_chr20_+_48807463 AB464474 EU832661 EU832739	-821	+	TSC_hg19_v1_chr20_+_48807366 AK291536 BC021931 AF289608 BC007538	-1070	+	NM_005194 TSC_hg19_v1_chr20_+_48807197	-1258	+	TSC_hg19_v1_chr20_+_49126895 AK290638 NM_002827	318425	+	TSC_hg19_v1_chr20_+_49126916 AK316563	318462	+	AK299830 TSC_hg19_v1_chr20_+_49126919	318468	+	EU832661|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##EU832739|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK291536|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC021931|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AF289608|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##BC007538|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##NM_005194|CEBPB|1051|CCAAT/enhancer binding protein (C/EBP), beta##AK290638|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##NM_002827|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK316563|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1	0.0	
chr2	120771582	120771762	reg1028772.p2	3.543	+	TSC_hg19_v1_chr2_+_120770652 AK023019 BC054508 AK290895 BC032822 NM_001184938	-939	+	TSC_hg19_v1_chr2_+_120770604 NM_001184937 NM_001184939 NM_020909	-1069	+	M68941 NM_002830 TSC_hg19_v1_chr2_+_120517497 AK314836 BC010674	-254272	+	TSC_hg19_v1_chr2_-_120980957 BC016849 AK289880 BC080607 AK024632	209265	-	TSC_hg19_v1_chr2_-_120980977 AF530474 NM_024121	209326	-	NM_002881 TSC_hg19_v1_chr2_+_121010418	238748	+	AK023019|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC054508|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##AK290895|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##BC032822|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184938|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184937|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_001184939|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##NM_020909|EPB41L5|57669|erythrocyte membrane protein band 4.1 like 5##M68941|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##NM_002830|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##AK314836|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC010674|PTPN4|5775|protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte)##BC016849|TMEM185B|79134|transmembrane protein 185B##BC080607|TMEM185B|79134|transmembrane protein 185B##AK024632|TMEM185B|79134|transmembrane protein 185B##AF530474|TMEM185B|79134|transmembrane protein 185B##NM_024121|TMEM185B|79134|transmembrane protein 185B##NM_002881|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)	0.0	
chr3	38385411	38385550	reg1034863.p1	3.543	+	AB011082 BC126482 BC130543 BC144079 NM_004803 BC075070 BC075071 HQ258465	-38009	+	NM_004256 AK315301 BC035973 AB010438 CU690244 AK298375	-78134	+	TSC_hg19_v1_chr3_+_38263077 AF087893	-122397	+	TSC_hg19_v1_chr3_+_38388285 AB015046 BC039712 NM_005108	2773	+	TSC_hg19_v1_chr3_+_38388288 BC052984	2810	+	TSC_hg19_v1_chr3_+_38388298 AK025728 AK314386 BC030231 BC137076 BC137080 AK293325	2861	+	AB011082|SLC22A14|9389|solute carrier family 22, member 14##BC126482|SLC22A14|9389|solute carrier family 22, member 14##BC130543|SLC22A14|9389|solute carrier family 22, member 14##BC144079|SLC22A14|9389|solute carrier family 22, member 14##NM_004803|SLC22A14|9389|solute carrier family 22, member 14##BC075070|SLC22A14|9389|solute carrier family 22, member 14##BC075071|SLC22A14|9389|solute carrier family 22, member 14##HQ258465|SLC22A14|9389|solute carrier family 22, member 14##NM_004256|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AK315301|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##BC035973|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AB010438|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AK298375|SLC22A13|9390|solute carrier family 22 (organic anion transporter), member 13##AF087893|OXSR1|9943|oxidative-stress responsive 1##AB015046|XYLB|9942|xylulokinase homolog (H. influenzae)##BC039712|XYLB|9942|xylulokinase homolog (H. influenzae)##NM_005108|XYLB|9942|xylulokinase homolog (H. influenzae)##BC052984|XYLB|9942|xylulokinase homolog (H. influenzae)##AK025728|XYLB|9942|xylulokinase homolog (H. influenzae)##AK314386|XYLB|9942|xylulokinase homolog (H. influenzae)##BC030231|XYLB|9942|xylulokinase homolog (H. influenzae)##BC137076|XYLB|9942|xylulokinase homolog (H. influenzae)##BC137080|XYLB|9942|xylulokinase homolog (H. influenzae)##AK293325|XYLB|9942|xylulokinase homolog (H. influenzae)	0.300692	CTCF.p2:23:0.301
chr4	148721194	148721330	reg1034361.p1	3.543	+	AB050785 BC128055 NM_024605 BC126899 BC109029 BC109030	-67805	+	TSC_hg19_v1_chr4_+_148653238 AK123785	-68011	+	BC021250 TSC_hg19_v1_chr4_-_148605287 AK096703 BC064403 NM_138364 AK292904	-115998	-	TSC_hg19_v1_chr4_-_149357955 AB587357	636720	-	TSC_hg19_v1_chr4_-_149363305 BC111758	642077	-	TSC_hg19_v1_chr4_-_149363539 AJ315514 M16801 AK304318 NM_000901 NM_001166104	642322	-	AB050785|ARHGAP10|79658|Rho GTPase activating protein 10##BC128055|ARHGAP10|79658|Rho GTPase activating protein 10##NM_024605|ARHGAP10|79658|Rho GTPase activating protein 10##BC126899|ARHGAP10|79658|Rho GTPase activating protein 10##BC109029|ARHGAP10|79658|Rho GTPase activating protein 10##BC109030|ARHGAP10|79658|Rho GTPase activating protein 10##AK123785|ARHGAP10|79658|Rho GTPase activating protein 10##BC021250|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK096703|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC064403|PRMT10|90826|protein arginine methyltransferase 10 (putative)##NM_138364|PRMT10|90826|protein arginine methyltransferase 10 (putative)##AK292904|PRMT10|90826|protein arginine methyltransferase 10 (putative)##BC111758|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AJ315514|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##M16801|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##AK304318|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_000901|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2##NM_001166104|NR3C2|4306|nuclear receptor subfamily 3, group C, member 2	0.250434	CTCF.p2:3:0.250
chr5	156251926	156252048	reg1041092.p2	3.543	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	-497814	+	BX537948 NM_000337 NM_001128209 NM_172244	-498227	+	NM_001099293 AK302388	-1858701	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	138248	-	BC013325 TSC_hg19_v1_chr5_-_156485247	233196	-	TSC_hg19_v1_chr5_-_156485459 NM_001099414 NM_012206	233478	-	BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC013325|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_001099414|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_012206|HAVCR1|26762|hepatitis A virus cellular receptor 1	0.399237	CTCF.p2:-9:0.399
chr5	158560052	158560165	reg1002765.p1	3.543	+	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	-33366	-	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	-33651	-	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1274018	-	AK304228 NM_001199382	74540	-	AK056513 NM_144726	74725	-	AK311433 AK304435 NM_001199381	75001	-	BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145##AK056513|RNF145|153830|ring finger protein 145##NM_144726|RNF145|153830|ring finger protein 145##AK311433|RNF145|153830|ring finger protein 145##AK304435|RNF145|153830|ring finger protein 145##NM_001199381|RNF145|153830|ring finger protein 145	0.0	
chr5	172197903	172198083	reg1023056.p2	3.543	+	AF275799 TSC_hg19_v1_chr5_-_172083715	-114350	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-129740	+	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	-316490	-	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	218	-	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	63325	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	188455	+	GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1	0.0	
chr6	18990682	18990793	reg1039408.p1	3.543	+	AK096832 NM_182757 AB076367 BC063311 AL832329	-603070	+	X64229 TSC_hg19_v1_chr6_-_18264759 BC012442 AK312616 AK298089 AK294079 BC035259 AK297749 NM_001134709 NM_003472	-726016	-	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	-835082	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	846898	+	TSC_hg19_v1_chr6_+_19838612 AF085889	847946	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	1221935	-	AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##X64229|DEK|7913|DEK oncogene##BC012442|DEK|7913|DEK oncogene##AK312616|DEK|7913|DEK oncogene##AK298089|DEK|7913|DEK oncogene##AK294079|DEK|7913|DEK oncogene##BC035259|DEK|7913|DEK oncogene##AK297749|DEK|7913|DEK oncogene##NM_001134709|DEK|7913|DEK oncogene##NM_003472|DEK|7913|DEK oncogene##BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1	0.513277	CTCF.p2:46:0.513
chr10	22993558	22993649	reg1035947.p1	3.542	+	TSC_hg19_v1_chr10_+_22726003 AK295718	-267604	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-359147	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-383438	+	AK294817 TSC_hg19_v1_chr10_-_23003038	9434	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	9887	-	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	223378	+	AK295718|LOC100289455|100289455|uncharacterized LOC100289455##NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3	0.0	
chr10	25013176	25013281	reg1037182.p2	3.542	+	AF480466 NM_020824 TSC_hg19_v1_chr10_-_25012632	-622	-	AK307604 TSC_hg19_v1_chr10_-_25012174	-1055	-	BX640796 BX648451 TSC_hg19_v1_chr10_+_24755461 BC098577	-257759	+	AB464023 CU679021 TSC_hg19_v1_chr10_-_25241536 AF226056 AB209792 AK222674 AK294130 AK304055 AK021950 NM_020200 BC008662 AK309614	228304	-	CU693144 DQ892076 DQ895269 BC064597 AK095021 NM_145010 AY454125 AK292495 BC026165	291746	-	NM_024838 TSC_hg19_v1_chr10_+_25305540 AK125249 BC035132 BX647989	292322	+	AF480466|ARHGAP21|57584|Rho GTPase activating protein 21##NM_020824|ARHGAP21|57584|Rho GTPase activating protein 21##AK307604|ARHGAP21|57584|Rho GTPase activating protein 21##BX640796|KIAA1217|56243|KIAA1217##BX648451|KIAA1217|56243|KIAA1217##BC098577|KIAA1217|56243|KIAA1217##AF226056|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AB209792|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK222674|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK294130|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK021950|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##NM_020200|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##BC008662|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##AK309614|PRTFDC1|56952|phosphoribosyl transferase domain containing 1##DQ892076|ENKUR|219670|enkurin, TRPC channel interacting protein##DQ895269|ENKUR|219670|enkurin, TRPC channel interacting protein##AK095021|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_145010|ENKUR|219670|enkurin, TRPC channel interacting protein##AY454125|ENKUR|219670|enkurin, TRPC channel interacting protein##AK292495|ENKUR|219670|enkurin, TRPC channel interacting protein##BC026165|ENKUR|219670|enkurin, TRPC channel interacting protein##NM_024838|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##AK125249|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BC035132|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)##BX647989|THNSL1|79896|threonine synthase-like 1 (S. cerevisiae)	0.033757	
chr10	61833816	61833917	reg1029219.p1	3.542	+	D90075 BC064391 TSC_hg19_v1_chr10_-_61666249 BC036757 BC022284 AK292593 NM_005436	-167542	-	AB590767 TSC_hg19_v1_chr10_-_61666205 S72869	-167665	-	AK126643 TSC_hg19_v1_chr10_-_61469461 NM_194298	-364142	-	AK292927 AK092527 NM_001149	66850	-	U13616 NM_020987	315694	-	AB209308 TSC_hg19_v1_chr10_-_62332715 AK126851 NM_001204404	498824	-	BC064391|CCDC6|8030|coiled-coil domain containing 6##BC036757|CCDC6|8030|coiled-coil domain containing 6##BC022284|CCDC6|8030|coiled-coil domain containing 6##AK292593|CCDC6|8030|coiled-coil domain containing 6##NM_005436|CCDC6|8030|coiled-coil domain containing 6##S72869|CCDC6|8030|coiled-coil domain containing 6##AK126643|LOC100129721|100129721|uncharacterized LOC100129721##NM_194298|SLC16A9|220963|solute carrier family 16, member 9 (monocarboxylic acid transporter 9)##AK292927|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK092527|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001149|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##U13616|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_020987|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AB209308|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##AK126851|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)##NM_001204404|ANK3|288|ankyrin 3, node of Ranvier (ankyrin G)	0.02371	
chr12	46777810	46777899	reg1025239.p3	3.542	+	TSC_hg19_v1_chr12_-_46766619 NM_018976	-11251	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-11565	-	NM_001077484 NM_030674	-114647	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	441902	-	TSC_hg19_v1_chr12_+_47473404 BC072670	695543	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	695729	-	NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2	0.0	
chr12	5758056	5758126	reg1040098.p1	3.542	+	BC069773 NM_002527 BC107075 AB464638 CR541906 CU687004	-154753	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	-216815	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	-604972	+	FJ384095 AB593159 TSC_hg19_v1_chr12_-_6054549	296383	-	AJ272204 NM_020373	297306	-	X04385 AK301216 TSC_hg19_v1_chr12_-_6233752 AK292122 M17588 X04146 AK298097 BC022258 NM_000552	475668	-	BC069773|NTF3|4908|neurotrophin 3##NM_002527|NTF3|4908|neurotrophin 3##BC107075|NTF3|4908|neurotrophin 3##CR541906|NTF3|4908|neurotrophin 3##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##FJ384095|ANO2|57101|anoctamin 2##AB593159|ANO2|57101|anoctamin 2##AJ272204|ANO2|57101|anoctamin 2##NM_020373|ANO2|57101|anoctamin 2##X04385|VWF|7450|von Willebrand factor##AK301216|VWF|7450|von Willebrand factor##AK292122|VWF|7450|von Willebrand factor##M17588|VWF|7450|von Willebrand factor##X04146|VWF|7450|von Willebrand factor##AK298097|VWF|7450|von Willebrand factor##BC022258|VWF|7450|von Willebrand factor##NM_000552|VWF|7450|von Willebrand factor	0.0	
chr15	59042266	59042364	reg1037269.p1	3.542	+	TSC_hg19_v1_chr15_-_59041988 BC126253 BC143935 NM_001110	-261	-	TSC_hg19_v1_chr15_-_59041833 AK300472	-493	-	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	-526	-	TSC_hg19_v1_chr15_+_59063396 AL833610 NM_001040450 NM_001040453	21092	+	BC060514 TSC_hg19_v1_chr15_+_59063500 AK297291 AK075319 AB075509 BC140811 BC144616	21207	+	AK000867 TSC_hg19_v1_chr15_-_59225776 AK055195 BC108656 AK291423 AK131242	183467	-	BC126253|ADAM10|102|ADAM metallopeptidase domain 10##BC143935|ADAM10|102|ADAM metallopeptidase domain 10##NM_001110|ADAM10|102|ADAM metallopeptidase domain 10##AK300472|ADAM10|102|ADAM metallopeptidase domain 10##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10##AL833610|FAM63B|54629|family with sequence similarity 63, member B##NM_001040450|FAM63B|54629|family with sequence similarity 63, member B##NM_001040453|FAM63B|54629|family with sequence similarity 63, member B##BC060514|FAM63B|54629|family with sequence similarity 63, member B##AK297291|FAM63B|54629|family with sequence similarity 63, member B##AK075319|FAM63B|54629|family with sequence similarity 63, member B##AB075509|FAM63B|54629|family with sequence similarity 63, member B##BC140811|FAM63B|54629|family with sequence similarity 63, member B##BC144616|FAM63B|54629|family with sequence similarity 63, member B##AK000867|SLTM|79811|SAFB-like, transcription modulator##AK055195|SLTM|79811|SAFB-like, transcription modulator##BC108656|SLTM|79811|SAFB-like, transcription modulator##AK291423|SLTM|79811|SAFB-like, transcription modulator##AK131242|SLTM|79811|SAFB-like, transcription modulator	0.0	
chr16	52895642	52895740	reg1042573.p1	3.542	+	AK299202 NM_001146188	-313978	-	NM_001080430	-314886	-	NM_001242473	-787845	-	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	193190	+	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	237408	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	269369	+	AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##NM_001242473|LOC388276|388276|hCG2045437##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9	0.991829	CTCF.p2:-2:0.992
chr16	67360749	67360864	reg1040707.p2	3.542	+	TSC_hg19_v1_chr16_+_67360728 AY963267 BC026156 NM_018296 BC018031	-54	+	BC070103 BC094790 AK302748 AK302567 BC117335 NM_001100915 AK097481	-162	-	TSC_hg19_v1_chr16_+_67313455 BC063501 NM_001129729 NM_001129731 BC054486	-47364	+	AK311487 NM_001161575 AK297329 AK309897 AK001866 AK292311 AY313780 AK301766	20472	+	TSC_hg19_v1_chr16_-_67427402 AF132972 AF078846 BC000691 NM_015964 NM_016140	66573	-	TSC_hg19_v1_chr16_-_67450360 NM_013304 U90653 BC021908	89491	-	AY963267|LRRC36|55282|leucine rich repeat containing 36##BC026156|LRRC36|55282|leucine rich repeat containing 36##NM_018296|LRRC36|55282|leucine rich repeat containing 36##BC018031|LRRC36|55282|leucine rich repeat containing 36##BC070103|KCTD19|146212|potassium channel tetramerisation domain containing 19##BC094790|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK302748|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK302567|KCTD19|146212|potassium channel tetramerisation domain containing 19##BC117335|KCTD19|146212|potassium channel tetramerisation domain containing 19##NM_001100915|KCTD19|146212|potassium channel tetramerisation domain containing 19##AK097481|KCTD19|146212|potassium channel tetramerisation domain containing 19##BC063501|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129729|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##NM_001129731|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##BC054486|PLEKHG4|25894|pleckstrin homology domain containing, family G (with RhoGef domain) member 4##AK311487|LRRC36|55282|leucine rich repeat containing 36##NM_001161575|LRRC36|55282|leucine rich repeat containing 36##AK297329|LRRC36|55282|leucine rich repeat containing 36##AK309897|LRRC36|55282|leucine rich repeat containing 36##AK001866|LRRC36|55282|leucine rich repeat containing 36##AK292311|LRRC36|55282|leucine rich repeat containing 36##AY313780|LRRC36|55282|leucine rich repeat containing 36##AK301766|LRRC36|55282|leucine rich repeat containing 36##AF132972|TPPP3|51673|tubulin polymerization-promoting protein family member 3##AF078846|TPPP3|51673|tubulin polymerization-promoting protein family member 3##BC000691|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_015964|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_016140|TPPP3|51673|tubulin polymerization-promoting protein family member 3##NM_013304|ZDHHC1|29800|zinc finger, DHHC-type containing 1##U90653|ZDHHC1|29800|zinc finger, DHHC-type containing 1##BC021908|ZDHHC1|29800|zinc finger, DHHC-type containing 1	0.905296	CTCF.p2:3:0.905
chr17	43539420	43539522	reg1031121.p1	3.542	+	TSC_hg19_v1_chr17_-_43510292 BC067345 NM_174919	-29184	-	TSC_hg19_v1_chr17_-_43510237 AK290650	-29244	-	TSC_hg19_v1_chr17_-_43503000 AK125535 NM_199282	-36470	-	TSC_hg19_v1_chr17_-_43568118 AK299116 BC053848 AB002354 BC064361	28631	-	TSC_hg19_v1_chr17_-_43568133 NM_014798	28683	-	TSC_hg19_v1_chr17_+_43861628 NM_001145146 NM_001145147 NM_001145148 NM_004382	322165	+	BC067345|ARHGAP27|201176|Rho GTPase activating protein 27##NM_174919|ARHGAP27|201176|Rho GTPase activating protein 27##AK290650|ARHGAP27|201176|Rho GTPase activating protein 27##AK125535|ARHGAP27|201176|Rho GTPase activating protein 27##NM_199282|ARHGAP27|201176|Rho GTPase activating protein 27##AK299116|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC053848|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##AB002354|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##BC064361|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##NM_014798|PLEKHM1|9842|pleckstrin homology domain containing, family M (with RUN domain) member 1##NM_001145146|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145147|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_001145148|CRHR1|1394|corticotropin releasing hormone receptor 1##NM_004382|CRHR1|1394|corticotropin releasing hormone receptor 1	0.0	
chr17	77813800	77813933	reg1021027.p2	3.542	+	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	-724	-	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	-42959	-	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	-61885	+	BC044939 TSC_hg19_v1_chr17_+_77893233	79333	+	TSC_hg19_v1_chr17_-_78009672 BC028290 NM_019020	195736	-	NM_001243342 NM_017950 TSC_hg19_v1_chr17_+_78010456 BC035251 AK000760 BC058288	196582	+	AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##BC028290|TBC1D16|125058|TBC1 domain family, member 16##NM_019020|TBC1D16|125058|TBC1 domain family, member 16##NM_001243342|CCDC40|55036|coiled-coil domain containing 40##NM_017950|CCDC40|55036|coiled-coil domain containing 40##BC035251|CCDC40|55036|coiled-coil domain containing 40##AK000760|CCDC40|55036|coiled-coil domain containing 40##BC058288|CCDC40|55036|coiled-coil domain containing 40	0.0	
chr19	14153546	14153665	reg1009143.p1	3.542	+	TSC_hg19_v1_chr19_+_14142622 BC028003 DQ891051 DQ894230 CU688366	-10958	+	AF265242 AY358876 TSC_hg19_v1_chr19_+_14142572	-11020	+	TSC_hg19_v1_chr19_+_14142542 AF053004 AF106912	-11091	+	NM_001145028	16365	-	TSC_hg19_v1_chr19_-_14201272 AY453840 NM_138352	47671	-	TSC_hg19_v1_chr19_-_14224999 AF208004 AF224718 NM_207518 AK292284 AF239744	71449	-	BC028003|IL27RA|9466|interleukin 27 receptor, alpha##DQ891051|IL27RA|9466|interleukin 27 receptor, alpha##DQ894230|IL27RA|9466|interleukin 27 receptor, alpha##AF265242|IL27RA|9466|interleukin 27 receptor, alpha##AY358876|IL27RA|9466|interleukin 27 receptor, alpha##AF053004|IL27RA|9466|interleukin 27 receptor, alpha##AF106912|IL27RA|9466|interleukin 27 receptor, alpha##NM_001145028|PALM3|342979|paralemmin 3##AY453840|SAMD1|90378|sterile alpha motif domain containing 1##NM_138352|SAMD1|90378|sterile alpha motif domain containing 1##AF208004|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF224718|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##NM_207518|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AK292284|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##AF239744|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha	0.0	
chr2	37033049	37033160	reg1039389.p2	3.542	+	TSC_hg19_v1_chr2_+_36923944 BC061519 AK056772 AK292149 AY358338 AL832679 AF063833 BC128260	-109144	+	NM_001177969 NM_001177970 NM_001177971 NM_001177972 NM_053276 AK299426 TSC_hg19_v1_chr2_+_36923849	-109258	+	AF113124 BC064484 BC054043 BC089390 BC047020 BC110386 TSC_hg19_v1_chr2_-_36825294 BC037566 BC018032 AB076184 NM_001042548 NM_005102	-207822	-	TSC_hg19_v1_chr2_-_37076016 BC015406	42926	-	AB590635 BC106879 AJ223814 BC106878 NM_003162 TSC_hg19_v1_chr2_-_37193662	160531	-	TSC_hg19_v1_chr2_-_37297372 BX538008	264340	-	BC061519|VIT|5212|vitrin##AK056772|VIT|5212|vitrin##AK292149|VIT|5212|vitrin##AY358338|VIT|5212|vitrin##AL832679|VIT|5212|vitrin##AF063833|VIT|5212|vitrin##BC128260|VIT|5212|vitrin##NM_001177969|VIT|5212|vitrin##NM_001177970|VIT|5212|vitrin##NM_001177971|VIT|5212|vitrin##NM_001177972|VIT|5212|vitrin##NM_053276|VIT|5212|vitrin##AK299426|VIT|5212|vitrin##AF113124|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC064484|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC054043|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC089390|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC047020|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC110386|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC037566|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC018032|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##AB076184|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_001042548|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##NM_005102|FEZ2|9637|fasciculation and elongation protein zeta 2 (zygin II)##BC015406|STRN|6801|striatin, calmodulin binding protein##BC106879|STRN|6801|striatin, calmodulin binding protein##AJ223814|STRN|6801|striatin, calmodulin binding protein##BC106878|STRN|6801|striatin, calmodulin binding protein##NM_003162|STRN|6801|striatin, calmodulin binding protein##BX538008|HEATR5B|54497|HEAT repeat containing 5B	0.0	
chr2	43629329	43629417	reg1031042.p2	3.542	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-175631	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-175643	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-176028	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	193775	-	TSC_hg19_v1_chr2_+_43864411 BC063310	235040	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	235066	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.0	
chr5	14287275	14287423	reg1034729.p1	3.542	+	TSC_hg19_v1_chr5_+_14143450 NM_007118 AB587567 AF091395 U42390	-143677	+	AY050643 TSC_hg19_v1_chr5_-_14011873	-275479	-	AX800026 AY045575 NM_001369	-342761	-	TSC_hg19_v1_chr5_+_14488527 AK131423	201190	+	NM_019018 TSC_hg19_v1_chr5_+_14581905 AK222731	294551	+	TSC_hg19_v1_chr5_+_14581949 AK001989 BC011524 CU679940	294615	+	NM_007118|TRIO|7204|triple functional domain (PTPRF interacting)##AF091395|TRIO|7204|triple functional domain (PTPRF interacting)##U42390|TRIO|7204|triple functional domain (PTPRF interacting)##AY050643|DNAH5|1767|dynein, axonemal, heavy chain 5##AY045575|DNAH5|1767|dynein, axonemal, heavy chain 5##NM_001369|DNAH5|1767|dynein, axonemal, heavy chain 5##AK131423|TRIO|7204|triple functional domain (PTPRF interacting)##NM_019018|FAM105A|54491|family with sequence similarity 105, member A##AK222731|FAM105A|54491|family with sequence similarity 105, member A##AK001989|FAM105A|54491|family with sequence similarity 105, member A##BC011524|FAM105A|54491|family with sequence similarity 105, member A	0.0	
chr5	151100642	151100713	reg1032495.p1	3.542	+	TSC_hg19_v1_chr5_-_151066495 AK096969 AK299441 AK315591 D28381 BC072457 NM_003118	-34169	-	Y00755 BC004974 J03040 TSC_hg19_v1_chr5_-_151066477	-34216	-	AF231022 NM_001447	-152173	-	TSC_hg19_v1_chr5_-_151138170 AK091843 AX747215 NM_004045 AK293063 BC112248 BC112250	37538	-	TSC_hg19_v1_chr5_-_151150991 AB593120	50296	-	TSC_hg19_v1_chr5_+_151151479 BX648012 NM_005754 NM_198395	50795	+	AK096969|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK299441|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AK315591|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##D28381|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC072457|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##NM_003118|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##Y00755|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##BC004974|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##J03040|SPARC|6678|secreted protein, acidic, cysteine-rich (osteonectin)##AF231022|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##NM_001447|FAT2|2196|FAT tumor suppressor homolog 2 (Drosophila)##AK091843|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##NM_004045|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AK293063|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112248|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##BC112250|ATOX1|475|ATX1 antioxidant protein 1 homolog (yeast)##AB593120|LOC100652758|100652758|uncharacterized LOC100652758##BX648012|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_005754|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1##NM_198395|G3BP1|10146|GTPase activating protein (SH3 domain) binding protein 1	0.0	
chr7	104537887	104538039	reg1038897.p2	3.542	+	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-568745	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-689532	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-907967	-	TSC_hg19_v1_chr7_-_104567089 BC050337	29127	-	TSC_hg19_v1_chr7_-_104653491 AK124046	115519	-	TSC_hg19_v1_chr7_-_104654062 AK094372	116111	-	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##BC050337|LOC723809|723809|uncharacterized LOC723809##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545	0.0	
chr7	99815452	99815632	reg1008151.p3	3.542	+	TSC_hg19_v1_chr7_+_99775540 NM_012447 AK292394 BC146806 AK302693 BC047490 BC028684 AL833816 BC140932	-39979	+	AJ007798 TSC_hg19_v1_chr7_+_99775380	-40178	+	AB587513 AM392909 CU693354 DQ893325 DQ896641 AL834418 TSC_hg19_v1_chr7_-_99774981 AB209144 AK096281 BC027972 NM_152742 AY093588	-40615	-	NM_024070	1328	+	BC065200 AK290510 TSC_hg19_v1_chr7_-_99869856 BC044886 BC090867 BC033723 BC053367 NM_178831	54288	-	BC056606 NM_001004351	89782	+	NM_012447|STAG3|10734|stromal antigen 3##AK292394|STAG3|10734|stromal antigen 3##BC146806|STAG3|10734|stromal antigen 3##AK302693|STAG3|10734|stromal antigen 3##BC047490|STAG3|10734|stromal antigen 3##BC028684|STAG3|10734|stromal antigen 3##AL833816|STAG3|10734|stromal antigen 3##BC140932|STAG3|10734|stromal antigen 3##AJ007798|STAG3|10734|stromal antigen 3##AM392909|GPC2|221914|glypican 2##DQ893325|GPC2|221914|glypican 2##DQ896641|GPC2|221914|glypican 2##AL834418|GPC2|221914|glypican 2##AK096281|GPC2|221914|glypican 2##BC027972|GPC2|221914|glypican 2##NM_152742|GPC2|221914|glypican 2##AY093588|GPC2|221914|glypican 2##NM_024070|PVRIG|79037|poliovirus receptor related immunoglobulin domain containing##BC065200|GATS|352954|GATS, stromal antigen 3 opposite strand##AK290510|GATS|352954|GATS, stromal antigen 3 opposite strand##BC044886|GATS|352954|GATS, stromal antigen 3 opposite strand##BC090867|GATS|352954|GATS, stromal antigen 3 opposite strand##BC033723|GATS|352954|GATS, stromal antigen 3 opposite strand##BC053367|GATS|352954|GATS, stromal antigen 3 opposite strand##NM_178831|GATS|352954|GATS, stromal antigen 3 opposite strand##BC056606|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)##NM_001004351|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)	0.152777	
chr8	141601551	141601662	reg1029835.p1	3.542	+	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-80043	+	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	-80214	+	AK128755 NM_031466	-132929	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	44018	-	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	409650	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	537131	+	AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK128755|TRAPPC9|83696|trafficking protein particle complex 9##NM_031466|TRAPPC9|83696|trafficking protein particle complex 9##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3	0.019739	
chr9	19013346	19013437	reg1032300.p1	3.542	+	AK291956 TSC_hg19_v1_chr9_+_18474150 BC030262 AF176313 CU688870	-539208	+	NM_001040272 NM_052866 TSC_hg19_v1_chr9_+_18474091 AK290667 AY358327	-539303	+	AK293546 NM_003026 TSC_hg19_v1_chr9_+_17579120 BC032825 AK057744 AK312400 AK293592 AF036268 X99657 AB464202 CU689554 AB206840 AB206841 BT019682 CR542086 CR542102	-1434295	+	BC033489 AK292245 AK057474 NM_153707	19828	-	TSC_hg19_v1_chr9_+_19049372 NM_006570	35972	+	TSC_hg19_v1_chr9_+_19049391 BC009990	36000	+	AK291956|ADAMTSL1|92949|ADAMTS-like 1##BC030262|ADAMTSL1|92949|ADAMTS-like 1##AF176313|ADAMTSL1|92949|ADAMTS-like 1##NM_001040272|ADAMTSL1|92949|ADAMTS-like 1##NM_052866|ADAMTSL1|92949|ADAMTS-like 1##AK290667|ADAMTSL1|92949|ADAMTS-like 1##AY358327|ADAMTSL1|92949|ADAMTS-like 1##AK293546|SH3GL2|6456|SH3-domain GRB2-like 2##NM_003026|SH3GL2|6456|SH3-domain GRB2-like 2##BC032825|SH3GL2|6456|SH3-domain GRB2-like 2##AK057744|SH3GL2|6456|SH3-domain GRB2-like 2##AK312400|SH3GL2|6456|SH3-domain GRB2-like 2##AK293592|SH3GL2|6456|SH3-domain GRB2-like 2##AF036268|SH3GL2|6456|SH3-domain GRB2-like 2##X99657|SH3GL2|6456|SH3-domain GRB2-like 2##AB206840|SH3GL2|6456|SH3-domain GRB2-like 2##BT019682|SH3GL2|6456|SH3-domain GRB2-like 2##CR542086|SH3GL2|6456|SH3-domain GRB2-like 2##CR542102|SH3GL2|6456|SH3-domain GRB2-like 2##BC033489|FAM154A|158297|family with sequence similarity 154, member A##AK292245|FAM154A|158297|family with sequence similarity 154, member A##AK057474|FAM154A|158297|family with sequence similarity 154, member A##NM_153707|FAM154A|158297|family with sequence similarity 154, member A##NM_006570|RRAGA|10670|Ras-related GTP binding A##BC009990|RRAGA|10670|Ras-related GTP binding A	0.979277	CTCF.p2:-23:0.979
chr1	112082801	112082930	reg1036681.p2	3.541	+	NM_000677 NM_020683	-36123	-	TSC_hg19_v1_chr1_+_112016601 BC017973 NM_174896	-66267	+	TSC_hg19_v1_chr1_+_111992132 X60221	-90711	+	BC041707 BC064411 NM_001081976	23714	-	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	79602	+	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	199090	-	NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##BC017973|C1orf162|128346|chromosome 1 open reading frame 162##NM_174896|C1orf162|128346|chromosome 1 open reading frame 162##X60221|ATP5F1|515|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit B1##BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B	0.0	
chr11	95070705	95070885	reg1037547.p2	3.541	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	-106491	-	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-247783	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-270387	+	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	451856	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	451938	-	AK021591 TSC_hg19_v1_chr11_-_95522975 BC026013 NM_144664	452171	-	BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B##AK021591|FAM76B|143684|family with sequence similarity 76, member B##BC026013|FAM76B|143684|family with sequence similarity 76, member B##NM_144664|FAM76B|143684|family with sequence similarity 76, member B	0.0	
chr12	52463361	52463479	reg1032563.p1	3.541	+	NM_002135 NM_173157 TSC_hg19_v1_chr12_+_52445225 AK075491 AK075054 AK314437 BC016147 L13740 D49728	-18204	+	AK297526 NM_001202233	-46805	+	TSC_hg19_v1_chr12_+_52400728 BC053666 NM_181711	-62679	+	TSC_hg19_v1_chr12_+_52463754 NM_001098673 NM_021934 AK021835	334	+	TSC_hg19_v1_chr12_+_52463790 BC064533 BC005151 AF218031 BC009937	378	+	CU688016 AJ717743 BC033114 BC065180 NM_001081492 NM_182507 TSC_hg19_v1_chr12_-_52585799	122324	-	NM_002135|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_173157|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075491|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK075054|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK314437|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC016147|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##L13740|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##D49728|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##AK297526|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##NM_001202233|NR4A1|3164|nuclear receptor subfamily 4, group A, member 1##BC053666|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_181711|GRASP|160622|GRP1 (general receptor for phosphoinositides 1)-associated scaffold protein##NM_001098673|C12orf44|60673|chromosome 12 open reading frame 44##NM_021934|C12orf44|60673|chromosome 12 open reading frame 44##AK021835|C12orf44|60673|chromosome 12 open reading frame 44##BC005151|C12orf44|60673|chromosome 12 open reading frame 44##AF218031|C12orf44|60673|chromosome 12 open reading frame 44##BC009937|C12orf44|60673|chromosome 12 open reading frame 44##AJ717743|KRT80|144501|keratin 80##BC033114|KRT80|144501|keratin 80##BC065180|KRT80|144501|keratin 80##NM_001081492|KRT80|144501|keratin 80##NM_182507|KRT80|144501|keratin 80	0.0	
chr15	40397414	40397525	reg1019750.p2	3.541	+	TSC_hg19_v1_chr15_+_40331506 AK127696	-65991	+	AB451391 CU690086 TSC_hg19_v1_chr15_-_40331370 X73459 BC071716 U07857 BC100031 BC035495 BC051006 AB061546 NM_003134	-66117	-	TSC_hg19_v1_chr15_+_40294764 AK074361	-102673	+	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	817	-	BC104983 BC104985 BC069328 BC069505 NM_033503 AK024472	1141	-	TSC_hg19_v1_chr15_-_40401076 BC060783 BC070043 NM_001003940	3626	-	AK127696|LOC100131089|100131089|uncharacterized LOC100131089##AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AK074361|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor##BC104983|BMF|90427|Bcl2 modifying factor##BC104985|BMF|90427|Bcl2 modifying factor##BC069328|BMF|90427|Bcl2 modifying factor##BC069505|BMF|90427|Bcl2 modifying factor##NM_033503|BMF|90427|Bcl2 modifying factor##AK024472|BMF|90427|Bcl2 modifying factor##BC060783|BMF|90427|Bcl2 modifying factor##BC070043|BMF|90427|Bcl2 modifying factor##NM_001003940|BMF|90427|Bcl2 modifying factor	0.033575	
chr15	91473257	91473437	reg1034889.p2	3.541	+	BC136448 BC144111 NM_006122	-25928	+	AK289863 TSC_hg19_v1_chr15_+_91446685	-26722	+	TSC_hg19_v1_chr15_+_91445984 D55649 L28821	-27371	+	AK125721 BC045635 NM_001039675	62	+	TSC_hg19_v1_chr15_-_91475772 CU689746 NM_198527 BC033794 AK057584	2389	-	NM_018671	4867	+	BC136448|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##BC144111|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##NM_006122|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##AK289863|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##D55649|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##L28821|MAN2A2|4122|mannosidase, alpha, class 2A, member 2##AK125721|UNC45A|55898|unc-45 homolog A (C. elegans)##BC045635|UNC45A|55898|unc-45 homolog A (C. elegans)##NM_001039675|UNC45A|55898|unc-45 homolog A (C. elegans)##NM_198527|HDDC3|374659|HD domain containing 3##BC033794|HDDC3|374659|HD domain containing 3##AK057584|HDDC3|374659|HD domain containing 3##NM_018671|UNC45A|55898|unc-45 homolog A (C. elegans)	0.0	
chr16	51588791	51588894	reg1045344.p1	3.541	+	BC113881 BC113906 BC131548 Y18265 TSC_hg19_v1_chr16_-_51185251 AK295103 NM_002968	-403430	-	AK307835 NM_001127892	-404335	-	TSC_hg19_v1_chr16_+_50776066 AF161542 NM_001042412 BC012342	-812784	+	NM_001242473	519004	-	NM_001080430	991963	-	AK299202 NM_001146188	992871	-	BC113881|SALL1|6299|sal-like 1 (Drosophila)##BC113906|SALL1|6299|sal-like 1 (Drosophila)##BC131548|SALL1|6299|sal-like 1 (Drosophila)##Y18265|SALL1|6299|sal-like 1 (Drosophila)##AK295103|SALL1|6299|sal-like 1 (Drosophila)##NM_002968|SALL1|6299|sal-like 1 (Drosophila)##AK307835|SALL1|6299|sal-like 1 (Drosophila)##NM_001127892|SALL1|6299|sal-like 1 (Drosophila)##AF161542|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001042412|CYLD|1540|cylindromatosis (turban tumor syndrome)##BC012342|CYLD|1540|cylindromatosis (turban tumor syndrome)##NM_001242473|LOC388276|388276|hCG2045437##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3	0.0	
chr4	190861856	190862010	reg1043270.p2	3.541	+	AK093499 AX748169 NM_178556 BC113860 BC114469	-1801313	+	BC111959 BC111961 BC143709 AK098667 NM_173553	-1835529	-	AK056719 AY429593 NM_174900	-1945009	+	L76159 NM_004477 AK291890 BC053997 TSC_hg19_v1_chr4_+_190862026	74	+	TSC_hg19_v1_chr4_+_190862048 CU691066	172	+	BC144572 AY714545 NM_001005217 NM_001199232	86470	-	AK093499|TRIML1|339976|tripartite motif family-like 1##NM_178556|TRIML1|339976|tripartite motif family-like 1##BC113860|TRIML1|339976|tripartite motif family-like 1##BC114469|TRIML1|339976|tripartite motif family-like 1##BC111959|TRIML2|205860|tripartite motif family-like 2##BC111961|TRIML2|205860|tripartite motif family-like 2##BC143709|TRIML2|205860|tripartite motif family-like 2##AK098667|TRIML2|205860|tripartite motif family-like 2##NM_173553|TRIML2|205860|tripartite motif family-like 2##AK056719|ZFP42|132625|zinc finger protein 42 homolog (mouse)##AY429593|ZFP42|132625|zinc finger protein 42 homolog (mouse)##NM_174900|ZFP42|132625|zinc finger protein 42 homolog (mouse)##L76159|FRG1|2483|FSHD region gene 1##NM_004477|FRG1|2483|FSHD region gene 1##AK291890|FRG1|2483|FSHD region gene 1##BC053997|FRG1|2483|FSHD region gene 1##BC144572|FRG2|448831|FSHD region gene 2##AY714545|FRG2|448831|FSHD region gene 2##NM_001005217|FRG2|448831|FSHD region gene 2##NM_001199232|LOC100288255|100288255|FSHD region gene 2-like	0.011073	
chr5	180261649	180261780	reg1033687.p1	3.541	+	TSC_hg19_v1_chr5_+_180258018 BC047586	-3709	+	TSC_hg19_v1_chr5_+_180257959 AK308536	-3762	+	AK057194 AK124428 TSC_hg19_v1_chr5_-_180242542	-19172	-	AK295714 TSC_hg19_v1_chr5_-_180288277 AK303450 BC029573 AK091376 AX746945 NM_001172638 NM_152283	26577	-	NM_001040462 NM_001159707 NM_001159708 NM_001159709 NM_024850 AK296597 AY358523 AK025111 AK225213 BC119696 BC119697	64460	+	AK298687 NM_001159710 AK309639 AK308012	74856	+	BC047586|LOC729678|729678|uncharacterized LOC729678##AK057194|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK295714|ZFP62|643836|zinc finger protein 62 homolog (mouse)##AK303450|ZFP62|643836|zinc finger protein 62 homolog (mouse)##BC029573|ZFP62|643836|zinc finger protein 62 homolog (mouse)##AK091376|ZFP62|643836|zinc finger protein 62 homolog (mouse)##NM_001172638|ZFP62|643836|zinc finger protein 62 homolog (mouse)##NM_152283|ZFP62|643836|zinc finger protein 62 homolog (mouse)##NM_001040462|BTNL8|79908|butyrophilin-like 8##NM_001159707|BTNL8|79908|butyrophilin-like 8##NM_001159708|BTNL8|79908|butyrophilin-like 8##NM_001159709|BTNL8|79908|butyrophilin-like 8##NM_024850|BTNL8|79908|butyrophilin-like 8##AK296597|BTNL8|79908|butyrophilin-like 8##AY358523|BTNL8|79908|butyrophilin-like 8##AK025111|BTNL8|79908|butyrophilin-like 8##AK225213|BTNL8|79908|butyrophilin-like 8##BC119696|BTNL8|79908|butyrophilin-like 8##BC119697|BTNL8|79908|butyrophilin-like 8##AK298687|BTNL8|79908|butyrophilin-like 8##NM_001159710|BTNL8|79908|butyrophilin-like 8##AK309639|BTNL8|79908|butyrophilin-like 8##AK308012|BTNL8|79908|butyrophilin-like 8	0.0	
chr9	109918151	109918218	reg1020655.p2	3.541	+	TSC_hg19_v1_chr9_+_109686439 CR749850	-231715	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	-292820	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-1461266	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	127348	+	TSC_hg19_v1_chr9_+_110045559 AK125226 AK223479	127373	+	TSC_hg19_v1_chr9_+_110045567 D21090	127418	+	CR749850|ZNF462|58499|zinc finger protein 462##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK125226|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK223479|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##D21090|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.0	
chrX	153601997	153602102	reg1019880.p2	3.541	+	TSC_hg19_v1_chrX_-_153599726 AB593010	-2327	-	TSC_hg19_v1_chrX_-_153599586 AB191259 AB371575 AB371577 AB371578 AB371579 AB191260 AB371574 AB371576 AB463042 AK090427	-2434	-	NM_001145934	-68641	+	X53416 TSC_hg19_v1_chrX_-_153602972	901	-	TSC_hg19_v1_chrX_-_153603003 AK125630 GU727643 NM_001110556 NM_001456	952	-	NM_000117 TSC_hg19_v1_chrX_+_153607623	5564	+	AB593010|FLNA|2316|filamin A, alpha##AB191259|FLNA|2316|filamin A, alpha##AB371575|FLNA|2316|filamin A, alpha##AB371577|FLNA|2316|filamin A, alpha##AB371578|FLNA|2316|filamin A, alpha##AB371579|FLNA|2316|filamin A, alpha##AB191260|FLNA|2316|filamin A, alpha##AB371574|FLNA|2316|filamin A, alpha##AB371576|FLNA|2316|filamin A, alpha##AK090427|FLNA|2316|filamin A, alpha##NM_001145934|TKTL1|8277|transketolase-like 1##X53416|FLNA|2316|filamin A, alpha##AK125630|FLNA|2316|filamin A, alpha##GU727643|FLNA|2316|filamin A, alpha##NM_001110556|FLNA|2316|filamin A, alpha##NM_001456|FLNA|2316|filamin A, alpha##NM_000117|EMD|2010|emerin	0.0	
chr11	103748114	103748222	reg1041051.p2	3.540	+	TSC_hg19_v1_chr11_+_102980188 AK125524 NM_001080463 NM_001377 AB231766 AB463019	-767969	+	TSC_hg19_v1_chr11_-_102962907 AK298227 NM_032299	-785245	-	AY364246 BC021074 TSC_hg19_v1_chr11_-_102962883 AK056993 BC004169	-785427	-	NM_001001711 AF429971 AK093336 AX748060 BC022018 BC022017 BC021710 BC021172	159170	+	AY359116 AY027517 AY027518 TSC_hg19_v1_chr11_-_104034843 AF113216 AB033832 AF336376 AK292801	286626	-	TSC_hg19_v1_chr11_-_104035039 NM_025208 NM_033135	286872	-	AK125524|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001080463|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##NM_001377|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AB231766|DYNC2H1|79659|dynein, cytoplasmic 2, heavy chain 1##AK298227|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_032299|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AY364246|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC021074|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##AK056993|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##BC004169|DCUN1D5|84259|DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)##NM_001001711|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AF429971|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AK093336|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022018|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC022017|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021710|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##BC021172|DDI1|414301|DNA-damage inducible 1 homolog 1 (S. cerevisiae)##AY359116|PDGFD|80310|platelet derived growth factor D##AY027517|PDGFD|80310|platelet derived growth factor D##AY027518|PDGFD|80310|platelet derived growth factor D##AF113216|PDGFD|80310|platelet derived growth factor D##AB033832|PDGFD|80310|platelet derived growth factor D##AF336376|PDGFD|80310|platelet derived growth factor D##AK292801|PDGFD|80310|platelet derived growth factor D##NM_025208|PDGFD|80310|platelet derived growth factor D##NM_033135|PDGFD|80310|platelet derived growth factor D	0.0	
chr1	162723225	162723372	reg1044706.p1	3.540	+	AK225063 TSC_hg19_v1_chr1_+_162602308	-120987	+	TSC_hg19_v1_chr1_+_162602235 NM_001014796 NM_006182 AK095975 AK225196 X74764 BX640899 BC052998 AK314388	-121052	+	TSC_hg19_v1_chr1_+_162531349 AK312685 S73498	-191925	+	AK022929 AF145023 NM_016371 BC065246 AK290741 BC007068 AJ249179 AF098786 AY358962 BT007075 CU675533 CU688024 GQ129366 GQ129367	37242	+	BC040018 AK123573 NM_178550	115279	-	NM_001102445	315097	+	AK225063|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_001014796|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_006182|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK095975|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK225196|DDR2|4921|discoidin domain receptor tyrosine kinase 2##X74764|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BX640899|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BC052998|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK314388|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK312685|UAP1|6675|UDP-N-acteylglucosamine pyrophosphorylase 1##S73498|UAP1|6675|UDP-N-acteylglucosamine pyrophosphorylase 1##AK022929|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF145023|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##NM_016371|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC065246|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AK290741|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC007068|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AJ249179|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF098786|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AY358962|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BT007075|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129366|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129367|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC040018|C1orf110|339512|chromosome 1 open reading frame 110##AK123573|C1orf110|339512|chromosome 1 open reading frame 110##NM_178550|C1orf110|339512|chromosome 1 open reading frame 110##NM_001102445|RGS4|5999|regulator of G-protein signaling 4	0.0	
chr12	131532155	131532305	reg1036638.p2	3.540	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-93777	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-175519	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-175605	+	TSC_hg19_v1_chr12_+_132195623 BC142980	663383	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	663426	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	780736	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.0	
chr1	236319922	236320087	reg1031143.p1	3.540	+	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	-14128	+	TSC_hg19_v1_chr1_-_236228670 BC012501	-91264	-	TSC_hg19_v1_chr1_-_236228496 AK297234	-91506	-	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	125184	-	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	125312	-	AK290862 AY028913 NM_145861 BC106873 BC106874 BC114557 BC114560 BC128082	237679	+	BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##BC012501|NID1|4811|nidogen 1##AK297234|NID1|4811|nidogen 1##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK290862|EDARADD|128178|EDAR-associated death domain##AY028913|EDARADD|128178|EDAR-associated death domain##NM_145861|EDARADD|128178|EDAR-associated death domain##BC114557|EDARADD|128178|EDAR-associated death domain##BC114560|EDARADD|128178|EDAR-associated death domain##BC128082|EDARADD|128178|EDAR-associated death domain	0.0	
chr12	46765018	46765185	reg1031603.p1	3.540	+	NM_001077484 NM_030674	-101894	-	BX647547 TSC_hg19_v1_chr12_-_46662796 AK225639 AF271070 BX648495 AK225778 AK308129	-102283	-	TSC_hg19_v1_chr12_-_46662776 BC010620 BX648676	-102358	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	1188	-	TSC_hg19_v1_chr12_-_46766619 NM_018976	1502	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	454655	-	NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##BX647547|SLC38A1|81539|solute carrier family 38, member 1##AK225639|SLC38A1|81539|solute carrier family 38, member 1##AF271070|SLC38A1|81539|solute carrier family 38, member 1##BX648495|SLC38A1|81539|solute carrier family 38, member 1##AK225778|SLC38A1|81539|solute carrier family 38, member 1##AK308129|SLC38A1|81539|solute carrier family 38, member 1##BC010620|SLC38A1|81539|solute carrier family 38, member 1##BX648676|SLC38A1|81539|solute carrier family 38, member 1##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4	0.0	
chr12	88347166	88347257	reg1034079.p1	3.540	+	BC035851 NM_013244	-1114554	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	-2079085	+	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	-2116974	-	AL833338 BC062424 AK093140 AX747948 NM_152589	75949	-	TSC_hg19_v1_chr12_+_88429312 AK095477 NM_001009894 CR936776 AK311222 BC058014 BX640968 BX537868 BX648026 AK311153 BC035136 BC092422 AB590923 AM392924 AL137488	82175	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	188658	-	BC035851|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##NM_013244|MGAT4C|25834|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AL833338|C12orf50|160419|chromosome 12 open reading frame 50##BC062424|C12orf50|160419|chromosome 12 open reading frame 50##AK093140|C12orf50|160419|chromosome 12 open reading frame 50##NM_152589|C12orf50|160419|chromosome 12 open reading frame 50##AK095477|C12orf29|91298|chromosome 12 open reading frame 29##NM_001009894|C12orf29|91298|chromosome 12 open reading frame 29##CR936776|C12orf29|91298|chromosome 12 open reading frame 29##AK311222|C12orf29|91298|chromosome 12 open reading frame 29##BC058014|C12orf29|91298|chromosome 12 open reading frame 29##BX640968|C12orf29|91298|chromosome 12 open reading frame 29##BX537868|C12orf29|91298|chromosome 12 open reading frame 29##BX648026|C12orf29|91298|chromosome 12 open reading frame 29##AK311153|C12orf29|91298|chromosome 12 open reading frame 29##BC035136|C12orf29|91298|chromosome 12 open reading frame 29##BC092422|C12orf29|91298|chromosome 12 open reading frame 29##AM392924|C12orf29|91298|chromosome 12 open reading frame 29##AL137488|C12orf29|91298|chromosome 12 open reading frame 29##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa	0.981033	CTCF.p2:18:0.981
chr16	85853782	85853848	reg1039323.p1	3.540	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-20480	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-20510	+	NM_001861 TSC_hg19_v1_chr16_+_85833279 BC047869 U90915	-20582	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	78971	+	TSC_hg19_v1_chr16_-_86542463 AK091834	688649	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	690341	+	BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_001861|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC047869|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##U90915|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1	0.0	
chr17	44919330	44919428	reg1025460.p1	3.540	+	AB464356 AB067628 BC114219 BC112116 BC112118 AY009397 NM_030753	-23358	-	NM_006178 AF135168 AF102846 AK294001 AK294727 AK294886 AK299786 BC030613 AK226078 AK290204 AK316057 U03985	-251302	+	BC020869 AB209344 AF208864 BX647266 NM_001113738 NM_016632	-262332	-	AY358217 AK127615 AB063483 NM_003396 BC064534 AB590853	9595	+	TSC_hg19_v1_chr17_+_45000492 NM_001012511 NM_004287 NM_054022	81108	+	TSC_hg19_v1_chr17_+_45000525 AK303650 AK290890 BC009710 AF229796 BC034762 CU679451 AF007548 DQ891461 DQ894638	81166	+	AB067628|WNT3|7473|wingless-type MMTV integration site family, member 3##BC114219|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112116|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112118|WNT3|7473|wingless-type MMTV integration site family, member 3##AY009397|WNT3|7473|wingless-type MMTV integration site family, member 3##NM_030753|WNT3|7473|wingless-type MMTV integration site family, member 3##NM_006178|NSF|4905|N-ethylmaleimide-sensitive factor##AF135168|NSF|4905|N-ethylmaleimide-sensitive factor##AF102846|NSF|4905|N-ethylmaleimide-sensitive factor##AK294001|NSF|4905|N-ethylmaleimide-sensitive factor##AK294727|NSF|4905|N-ethylmaleimide-sensitive factor##AK294886|NSF|4905|N-ethylmaleimide-sensitive factor##AK299786|NSF|4905|N-ethylmaleimide-sensitive factor##BC030613|NSF|4905|N-ethylmaleimide-sensitive factor##AK226078|NSF|4905|N-ethylmaleimide-sensitive factor##AK290204|NSF|4905|N-ethylmaleimide-sensitive factor##AK316057|NSF|4905|N-ethylmaleimide-sensitive factor##U03985|NSF|4905|N-ethylmaleimide-sensitive factor##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AB209344|ARL17A|51326|ADP-ribosylation factor-like 17A##AF208864|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A##AY358217|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AK127615|WNT9B|7484|wingless-type MMTV integration site family, member 9B##AB063483|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_003396|WNT9B|7484|wingless-type MMTV integration site family, member 9B##BC064534|WNT9B|7484|wingless-type MMTV integration site family, member 9B##NM_001012511|GOSR2|9570|golgi SNAP receptor complex member 2##NM_004287|GOSR2|9570|golgi SNAP receptor complex member 2##NM_054022|GOSR2|9570|golgi SNAP receptor complex member 2##AK290890|GOSR2|9570|golgi SNAP receptor complex member 2##BC009710|GOSR2|9570|golgi SNAP receptor complex member 2##AF229796|GOSR2|9570|golgi SNAP receptor complex member 2##BC034762|GOSR2|9570|golgi SNAP receptor complex member 2##AF007548|GOSR2|9570|golgi SNAP receptor complex member 2##DQ891461|GOSR2|9570|golgi SNAP receptor complex member 2##DQ894638|GOSR2|9570|golgi SNAP receptor complex member 2	0.996302	CTCF.p2:-24:0.996
chr18	36191023	36191204	reg1032363.p1	3.540	+	NM_001025087 NM_001025088 NM_001025089 NM_020180	-1045114	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	-1045417	-	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-1781993	-	TSC_hg19_v1_chr18_-_36915657 D28405	724543	-	TSC_hg19_v1_chr18_-_37380279 AK090603	1189155	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	3344086	+	NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK090603|LOC647946|647946|uncharacterized LOC647946##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3	0.0	
chr2	137132892	137132958	reg1039910.p1	3.540	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-257249	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-259127	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-389709	-	TSC_hg19_v1_chr2_+_137523114 AK299929	390191	+	NM_001080427	615536	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1589009	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.0	
chr3	27147629	27147720	reg1037762.p1	3.540	+	BC067784 TSC_hg19_v1_chr3_+_26664296 AF396933 NM_052953	-483374	+	TSC_hg19_v1_chr3_+_25831590 NM_001145391 NM_017897 AK000611 AK304821 AK225260 BC008202	-1316094	+	AK296047 NM_001145294	-1316162	-	TSC_hg19_v1_chr3_-_27410884 AK123061 NM_199347	263239	-	AF047033 AF089726 NM_003615	350570	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	378151	-	BC067784|LRRC3B|116135|leucine rich repeat containing 3B##AF396933|LRRC3B|116135|leucine rich repeat containing 3B##NM_052953|LRRC3B|116135|leucine rich repeat containing 3B##NM_001145391|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##NM_017897|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK000611|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK304821|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK225260|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##BC008202|OXSM|54995|3-oxoacyl-ACP synthase, mitochondrial##AK296047|NGLY1|55768|N-glycanase 1##NM_001145294|NGLY1|55768|N-glycanase 1##AK123061|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##NM_199347|NEK10|152110|NIMA (never in mitosis gene a)- related kinase 10##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7	0.544127	CTCF.p2:9:0.544
chr4	106113110	106113202	reg1041109.p2	3.540	+	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	-45112	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	-45345	+	BX640738 NM_017628	-46125	+	AM393754 AM393796 TSC_hg19_v1_chr4_-_106395220 AK294097 AL136655 AF161473 BC039462 BC008246 BC035569 BC012903 BC022803 AK289607 CU691190 AM393483 EU831414 EU831507 BC001065 BC021071 AB528841 AK297096 AK299125 AK299501 BC057219 AK000466 AB026722 AF217187 NM_006903 NM_176866 NM_176867 NM_176869	282034	-	AK000191 NM_001242729 NM_017700 BC105695	360626	+	TSC_hg19_v1_chr4_-_106629819 BC014442 AK314939 NM_001142471 NM_020395	516685	-	AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2##AM393754|PPA2|27068|pyrophosphatase (inorganic) 2##AM393796|PPA2|27068|pyrophosphatase (inorganic) 2##AK294097|PPA2|27068|pyrophosphatase (inorganic) 2##AL136655|PPA2|27068|pyrophosphatase (inorganic) 2##AF161473|PPA2|27068|pyrophosphatase (inorganic) 2##BC039462|PPA2|27068|pyrophosphatase (inorganic) 2##BC008246|PPA2|27068|pyrophosphatase (inorganic) 2##BC035569|PPA2|27068|pyrophosphatase (inorganic) 2##BC012903|PPA2|27068|pyrophosphatase (inorganic) 2##BC022803|PPA2|27068|pyrophosphatase (inorganic) 2##AK289607|PPA2|27068|pyrophosphatase (inorganic) 2##AM393483|PPA2|27068|pyrophosphatase (inorganic) 2##EU831414|PPA2|27068|pyrophosphatase (inorganic) 2##EU831507|PPA2|27068|pyrophosphatase (inorganic) 2##AK299125|PPA2|27068|pyrophosphatase (inorganic) 2##BC057219|PPA2|27068|pyrophosphatase (inorganic) 2##AK000466|PPA2|27068|pyrophosphatase (inorganic) 2##AB026722|PPA2|27068|pyrophosphatase (inorganic) 2##AF217187|PPA2|27068|pyrophosphatase (inorganic) 2##NM_006903|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176866|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176867|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176869|PPA2|27068|pyrophosphatase (inorganic) 2##AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_001242729|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC014442|INTS12|57117|integrator complex subunit 12##AK314939|INTS12|57117|integrator complex subunit 12##NM_001142471|INTS12|57117|integrator complex subunit 12##NM_020395|INTS12|57117|integrator complex subunit 12	0.0	
chr5	131439475	131439579	reg1038883.p1	3.540	+	M11220 NM_000758 BC113924 BC113999 BC108724 M11734 M10663 AY720441 AB591004 AF510855	-30002	+	M20137 NM_000588 BC069472 BC066272 BC066273 BC066274 BC066275 BC066276 M17115 M14743 CU686832 HQ448457	-43155	+	AK314452 BC047453 NM_001205248 NM_001205251 BC026161 NM_001205250 DQ655980	-91834	-	NM_001017973 NM_004199 BC017062	123416	-	TSC_hg19_v1_chr5_-_131563545 AY358970 BC025960 BC035813 BX647924 NM_001017974 NM_001142598 NM_001142599	123991	-	TSC_hg19_v1_chr5_+_131593340 BC016765 NM_001131027 NM_003687 AF154335	153826	+	M11220|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##NM_000758|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113924|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC113999|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##BC108724|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M11734|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M10663|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AY720441|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##AF510855|CSF2|1437|colony stimulating factor 2 (granulocyte-macrophage)##M20137|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##NM_000588|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC069472|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066272|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066273|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066274|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066275|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##BC066276|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M17115|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##M14743|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##HQ448457|IL3|3562|interleukin 3 (colony-stimulating factor, multiple)##AK314452|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC047453|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205248|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205251|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##BC026161|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001205250|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##DQ655980|ACSL6|23305|acyl-CoA synthetase long-chain family member 6##NM_001017973|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_004199|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC017062|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##AY358970|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC025960|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC035813|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BX647924|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001017974|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142598|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##NM_001142599|P4HA2|8974|prolyl 4-hydroxylase, alpha polypeptide II##BC016765|PDLIM4|8572|PDZ and LIM domain 4##NM_001131027|PDLIM4|8572|PDZ and LIM domain 4##NM_003687|PDLIM4|8572|PDZ and LIM domain 4##AF154335|PDLIM4|8572|PDZ and LIM domain 4	0.0	
chr6	11731017	11731135	reg1042496.p1	3.540	+	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-192578	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-348536	-	TSC_hg19_v1_chr6_-_11232902 NM_006403 NM_182966	-498166	-	NM_001143948 NM_032744	48203	-	NM_002114	281647	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	559517	+	NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_006403|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_182966|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr9	44211541	44211654	reg1039792.p1	3.540	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-526754	+	NM_001145196	-580868	-	AB462947 AM393131 BC146681 BC140809 BC171793 AL136793 NM_001012419 NM_001012421	-1078110	-	TSC_hg19_v1_chr9_+_45441926 BC006438	1230329	+	BC040528 NM_001113541 NM_015667	21298012	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	22245704	+	NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_001012421|ANKRD20A2|441430|ankyrin repeat domain 20 family, member A2##BC006438|LOC100132167|100132167|uncharacterized LOC100132167##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.019782	
chrX	139900239	139900388	reg1033970.p1	3.540	+	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	-33661	-	TSC_hg19_v1_chrX_+_139791923 AK054978	-108386	+	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	-313061	-	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	184493	+	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	196498	+	CR457088 EU446786 AB464610 TSC_hg19_v1_chrX_-_140271262	370921	-	M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1##CR457088|LDOC1|23641|leucine zipper, down-regulated in cancer 1##EU446786|LDOC1|23641|leucine zipper, down-regulated in cancer 1	0.584818	CTCF.p2:0:0.585
chr10	134385810	134385899	reg1023666.p2	3.539	+	TSC_hg19_v1_chr10_+_134351305 BC096280 BC096281 BC117515 AF273055 NM_005539	-34542	+	TSC_hg19_v1_chr10_+_134258657 BC030794 NM_173541	-127171	+	TSC_hg19_v1_chr10_+_134210703 NM_001098637 NM_138499 BC068574	-175145	+	TSC_hg19_v1_chr10_-_134599477 BC101635 BC104823 NM_177400	213652	-	CU692234 BC044661 AK098820 TSC_hg19_v1_chr10_-_134756065 NM_001200049 NM_173572	370184	-	NM_001083909 TSC_hg19_v1_chr10_+_134901429 AK124728	515603	+	BC096280|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC096281|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC117515|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##AF273055|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##NM_005539|INPP5A|3632|inositol polyphosphate-5-phosphatase, 40kDa##BC030794|C10orf91|170393|chromosome 10 open reading frame 91##NM_173541|C10orf91|170393|chromosome 10 open reading frame 91##NM_001098637|PWWP2B|170394|PWWP domain containing 2B##NM_138499|PWWP2B|170394|PWWP domain containing 2B##BC068574|PWWP2B|170394|PWWP domain containing 2B##BC101635|NKX6-2|84504|NK6 homeobox 2##BC104823|NKX6-2|84504|NK6 homeobox 2##NM_177400|NKX6-2|84504|NK6 homeobox 2##BC044661|TTC40|54777|tetratricopeptide repeat domain 40##AK098820|TTC40|54777|tetratricopeptide repeat domain 40##NM_001200049|TTC40|54777|tetratricopeptide repeat domain 40##NM_173572|TTC40|54777|tetratricopeptide repeat domain 40##NM_001083909|GPR123|84435|G protein-coupled receptor 123##AK124728|GPR123|84435|G protein-coupled receptor 123	0.0	
chr11	26003987	26004120	reg1001882.p2	3.539	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-1485404	+	NM_001195637	-3122082	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-3152708	-	NM_031418 AK302659	349677	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	589687	-	BC049207 NM_178498	739506	-	AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	0.0	
chr13	114896911	114896978	reg1042405.p2	3.539	+	TSC_hg19_v1_chr13_-_114567041 NM_000820	-329901	-	TSC_hg19_v1_chr13_-_114567037 BC030708	-329908	-	TSC_hg19_v1_chr13_-_114567011 BC038984 L13720	-329923	-	AB385165 TSC_hg19_v1_chr13_-_114898005 AK289746 X89399	1042	-	TSC_hg19_v1_chr13_-_114898028 AK295861 AK313795	1081	-	TSC_hg19_v1_chr13_-_114898058 AK128094	1122	-	NM_000820|GAS6|2621|growth arrest-specific 6##BC030708|GAS6|2621|growth arrest-specific 6##BC038984|GAS6|2621|growth arrest-specific 6##L13720|GAS6|2621|growth arrest-specific 6##AK289746|RASA3|22821|RAS p21 protein activator 3##X89399|RASA3|22821|RAS p21 protein activator 3##AK295861|RASA3|22821|RAS p21 protein activator 3##AK313795|RASA3|22821|RAS p21 protein activator 3##AK128094|RASA3|22821|RAS p21 protein activator 3	0.0	
chr13	38176947	38177047	reg1025206.p1	3.539	+	EU262883 EU262884 EU262885 EU262886 AY140646 AY918092 BC106709 BC106710 D13666 GU354210 D13665 TSC_hg19_v1_chr13_-_38172906 NM_001135934 NM_001135935 NM_001135936 NM_006475	-4076	-	BC028723 NM_145203	-497197	-	AK292376 TSC_hg19_v1_chr13_-_37633791 AF445026 AF093250 AK225376 AJ130894 BC001145 AK304227 BC030686 NM_001014286 NM_017569	-543284	-	BC104725 BC105306 BC105641 BC105917 AK312524 AF175406 AF063822 AF063823 AF063824 AF063825 NM_001135955 NM_001135956 NM_001135957 NM_001135958 NM_003306 NM_016179	266901	-	NM_016617 TSC_hg19_v1_chr13_+_38923946	746954	+	TSC_hg19_v1_chr13_+_38923995 AK095490 AK307111 BC005193 Z70222 AF208844 AK309914 AB154404 CR457189	747052	+	EU262883|POSTN|10631|periostin, osteoblast specific factor##EU262884|POSTN|10631|periostin, osteoblast specific factor##EU262885|POSTN|10631|periostin, osteoblast specific factor##EU262886|POSTN|10631|periostin, osteoblast specific factor##AY140646|POSTN|10631|periostin, osteoblast specific factor##AY918092|POSTN|10631|periostin, osteoblast specific factor##BC106709|POSTN|10631|periostin, osteoblast specific factor##BC106710|POSTN|10631|periostin, osteoblast specific factor##D13666|POSTN|10631|periostin, osteoblast specific factor##GU354210|POSTN|10631|periostin, osteoblast specific factor##D13665|POSTN|10631|periostin, osteoblast specific factor##NM_001135934|POSTN|10631|periostin, osteoblast specific factor##NM_001135935|POSTN|10631|periostin, osteoblast specific factor##NM_001135936|POSTN|10631|periostin, osteoblast specific factor##NM_006475|POSTN|10631|periostin, osteoblast specific factor##BC028723|CSNK1A1L|122011|casein kinase 1, alpha 1-like##NM_145203|CSNK1A1L|122011|casein kinase 1, alpha 1-like##AK292376|FAM48A|55578|family with sequence similarity 48, member A##AF445026|FAM48A|55578|family with sequence similarity 48, member A##AF093250|FAM48A|55578|family with sequence similarity 48, member A##AK225376|FAM48A|55578|family with sequence similarity 48, member A##AJ130894|FAM48A|55578|family with sequence similarity 48, member A##BC001145|FAM48A|55578|family with sequence similarity 48, member A##AK304227|FAM48A|55578|family with sequence similarity 48, member A##BC030686|FAM48A|55578|family with sequence similarity 48, member A##NM_001014286|FAM48A|55578|family with sequence similarity 48, member A##NM_017569|FAM48A|55578|family with sequence similarity 48, member A##BC104725|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105641|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##BC105917|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AK312524|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF175406|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063822|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063823|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063824|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##AF063825|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135955|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135956|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135957|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_001135958|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_003306|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016179|TRPC4|7223|transient receptor potential cation channel, subfamily C, member 4##NM_016617|UFM1|51569|ubiquitin-fold modifier 1##AK095490|UFM1|51569|ubiquitin-fold modifier 1##AK307111|UFM1|51569|ubiquitin-fold modifier 1##BC005193|UFM1|51569|ubiquitin-fold modifier 1##Z70222|UFM1|51569|ubiquitin-fold modifier 1##AF208844|UFM1|51569|ubiquitin-fold modifier 1##AK309914|UFM1|51569|ubiquitin-fold modifier 1##AB154404|UFM1|51569|ubiquitin-fold modifier 1##CR457189|UFM1|51569|ubiquitin-fold modifier 1	0.0	
chr16	86019130	86019201	reg1032680.p2	3.539	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-86379	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-185830	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-185860	+	TSC_hg19_v1_chr16_-_86542463 AK091834	523299	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	524991	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	525075	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.0	
chr2	199795059	199795181	reg1038807.p2	3.539	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	-1125750	+	NM_197970 AK302817	-1144134	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-1145080	-	TSC_hg19_v1_chr2_-_200213802 AK025127	418730	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	525682	-	TSC_hg19_v1_chr2_-_200322238 AJ438951	527130	-	AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2##AJ438951|SATB2|23314|SATB homeobox 2	0.109235	
chr22	45125689	45125789	reg1037082.p1	3.539	+	AK291564 TSC_hg19_v1_chr22_+_45098246 AF177331 AL355192 NM_181334	-27486	+	TSC_hg19_v1_chr22_+_45098090 NM_181333	-27671	+	AK091884 TSC_hg19_v1_chr22_+_45072964 AK055848	-52769	+	AK001306 NM_001017526 NM_001198726 NM_181335 BC059382 BC067824 BC048280	22722	+	TSC_hg19_v1_chr22_-_45404785 AK299836 AK297317 AK091480 AX747013 NM_001242450	279090	-	AB489146 CU012999 CU013287 CU680262 CR456448 BC012187 NM_138415	279765	-	AK291564|PRR5|55615|proline rich 5 (renal)##AF177331|PRR5|55615|proline rich 5 (renal)##AL355192|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181334|PRR5-ARHGAP8|553158|PRR5-ARHGAP8 readthrough##NM_181333|PRR5|55615|proline rich 5 (renal)##AK091884|PRR5|55615|proline rich 5 (renal)##AK055848|PRR5|55615|proline rich 5 (renal)##AK001306|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001017526|ARHGAP8|23779|Rho GTPase activating protein 8##NM_001198726|ARHGAP8|23779|Rho GTPase activating protein 8##NM_181335|ARHGAP8|23779|Rho GTPase activating protein 8##BC059382|ARHGAP8|23779|Rho GTPase activating protein 8##BC067824|ARHGAP8|23779|Rho GTPase activating protein 8##BC048280|ARHGAP8|23779|Rho GTPase activating protein 8##AK299836|PHF21B|112885|PHD finger protein 21B##AK297317|PHF21B|112885|PHD finger protein 21B##AK091480|PHF21B|112885|PHD finger protein 21B##NM_001242450|PHF21B|112885|PHD finger protein 21B##CU012999|PHF21B|112885|PHD finger protein 21B##CU013287|PHF21B|112885|PHD finger protein 21B##CR456448|PHF21B|112885|PHD finger protein 21B##BC012187|PHF21B|112885|PHD finger protein 21B##NM_138415|PHF21B|112885|PHD finger protein 21B	0.0	
chr5	158369475	158369648	reg1034880.p2	3.539	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1083471	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-1185181	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-1198821	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	156896	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	157181	-	AK304228 NM_001199382	265087	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.0	
chr7	129592077	129592200	reg1035697.p1	3.539	+	L22454 NM_001040110	-322221	+	AK293351 TSC_hg19_v1_chr7_+_129251621 BC016925 AK290891	-340526	+	TSC_hg19_v1_chr7_+_129251531 NM_005011	-340597	+	BC006277 TSC_hg19_v1_chr7_-_129592785 NM_001202498	613	-	TSC_hg19_v1_chr7_-_129592801 NM_003344 NM_182697	671	-	TSC_hg19_v1_chr7_-_129691215 BC000190 AB463378 AJ537494 AM393415 CU679956 BC011551 AF151050 AK001317 AK022373 NM_016478	99083	-	L22454|NRF1|4899|nuclear respiratory factor 1##NM_001040110|NRF1|4899|nuclear respiratory factor 1##AK293351|NRF1|4899|nuclear respiratory factor 1##BC016925|NRF1|4899|nuclear respiratory factor 1##AK290891|NRF1|4899|nuclear respiratory factor 1##NM_005011|NRF1|4899|nuclear respiratory factor 1##BC006277|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_001202498|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_003344|UBE2H|7328|ubiquitin-conjugating enzyme E2H##NM_182697|UBE2H|7328|ubiquitin-conjugating enzyme E2H##BC000190|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AJ537494|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AM393415|ZC3HC1|51530|zinc finger, C3HC-type containing 1##BC011551|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AF151050|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK001317|ZC3HC1|51530|zinc finger, C3HC-type containing 1##AK022373|ZC3HC1|51530|zinc finger, C3HC-type containing 1##NM_016478|ZC3HC1|51530|zinc finger, C3HC-type containing 1	0.0	
chr7	45847698	45847858	reg1028229.p2	3.539	+	TSC_hg19_v1_chr7_-_45808577 AL832059 BC092503	-39188	-	AB209496 TSC_hg19_v1_chr7_+_45614187	-233579	+	TSC_hg19_v1_chr7_+_45614105 AF497515 NM_021116	-233676	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	80327	+	AF042356 TSC_hg19_v1_chr7_+_45933167	85356	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	113028	-	AL832059|SEPT7P2|641977|septin 7 pseudogene 2##BC092503|SEPT7P2|641977|septin 7 pseudogene 2##AB209496|ADCY1|107|adenylate cyclase 1 (brain)##AF497515|ADCY1|107|adenylate cyclase 1 (brain)##NM_021116|ADCY1|107|adenylate cyclase 1 (brain)##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3	1.038856	CTCF.p2:27:0.988
chr7	72476667	72476798	reg1040700.p2	3.539	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-51490	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-79858	+	TSC_hg19_v1_chr7_+_72395623 AK123814 AB289621	-81107	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	92299	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	246092	-	AK057366 AY081948 AY081949 NM_178125	265352	-	BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##AK123814|POM121|9883|POM121 membrane glycoprotein##AB289621|POM121|9883|POM121 membrane glycoprotein##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50	0.0	
chrX	20074773	20074839	reg1037947.p1	3.539	+	AY092822 TSC_hg19_v1_chrX_-_20009180	-65698	-	NM_198279	-86425	-	TSC_hg19_v1_chrX_-_19905675 AK313308 AF230904 AY423734 NM_031892	-169102	-	AK294788 NM_001168467	59946	-	AK027409 TSC_hg19_v1_chrX_-_20135017 AK303019 AK316117 AK296319 BC136379 BC089400 NM_001168465 NM_001168466 NM_152780	60258	-	BT007064 EU831819 EU831896 TSC_hg19_v1_chrX_-_20159957 BC000793 BC110421 AK312320 BC067851 L18960 NM_001412	85070	-	AY092822|LOC729609|729609|uncharacterized LOC729609##NM_198279|CXorf23|256643|chromosome X open reading frame 23##AK313308|SH3KBP1|30011|SH3-domain kinase binding protein 1##AF230904|SH3KBP1|30011|SH3-domain kinase binding protein 1##AY423734|SH3KBP1|30011|SH3-domain kinase binding protein 1##NM_031892|SH3KBP1|30011|SH3-domain kinase binding protein 1##AK294788|MAP7D2|256714|MAP7 domain containing 2##NM_001168467|MAP7D2|256714|MAP7 domain containing 2##AK027409|MAP7D2|256714|MAP7 domain containing 2##AK303019|MAP7D2|256714|MAP7 domain containing 2##AK316117|MAP7D2|256714|MAP7 domain containing 2##AK296319|MAP7D2|256714|MAP7 domain containing 2##BC136379|MAP7D2|256714|MAP7 domain containing 2##BC089400|MAP7D2|256714|MAP7 domain containing 2##NM_001168465|MAP7D2|256714|MAP7 domain containing 2##NM_001168466|MAP7D2|256714|MAP7 domain containing 2##NM_152780|MAP7D2|256714|MAP7 domain containing 2##BT007064|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##EU831819|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##EU831896|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC000793|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC110421|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##AK312320|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##BC067851|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##L18960|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked##NM_001412|EIF1AX|1964|eukaryotic translation initiation factor 1A, X-linked	0.0	
chrX	87390839	87390950	reg1038773.p1	3.539	+	NM_019117 NM_057162 AK056457 AB051474 BC161675 AL832514 AF284765 AF284766 BC140839 BC140840 BC142652 BC146677 AB385497	-618089	+	AK055953 AK298787 NM_001139515	-1872924	+	AK091842 AX747214 TSC_hg19_v1_chrX_+_85403461	-1987429	+	NM_001184771 NM_033048 AK098646 AK313768 BC027614	611346	+	BC117398 BC117400 NM_138960 BC101144 BC101145 AF497480 BC029920 AB464725 HQ258115	1786117	+	NM_080832	3298702	+	NM_019117|KLHL4|56062|kelch-like 4 (Drosophila)##NM_057162|KLHL4|56062|kelch-like 4 (Drosophila)##AK056457|KLHL4|56062|kelch-like 4 (Drosophila)##AB051474|KLHL4|56062|kelch-like 4 (Drosophila)##BC161675|KLHL4|56062|kelch-like 4 (Drosophila)##AL832514|KLHL4|56062|kelch-like 4 (Drosophila)##AF284765|KLHL4|56062|kelch-like 4 (Drosophila)##AF284766|KLHL4|56062|kelch-like 4 (Drosophila)##BC140839|KLHL4|56062|kelch-like 4 (Drosophila)##BC140840|KLHL4|56062|kelch-like 4 (Drosophila)##BC142652|KLHL4|56062|kelch-like 4 (Drosophila)##BC146677|KLHL4|56062|kelch-like 4 (Drosophila)##AK055953|DACH2|117154|dachshund homolog 2 (Drosophila)##AK298787|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001139515|DACH2|117154|dachshund homolog 2 (Drosophila)##AK091842|DACH2|117154|dachshund homolog 2 (Drosophila)##NM_001184771|CPXCR1|53336|CPX chromosome region, candidate 1##NM_033048|CPXCR1|53336|CPX chromosome region, candidate 1##AK098646|CPXCR1|53336|CPX chromosome region, candidate 1##AK313768|CPXCR1|53336|CPX chromosome region, candidate 1##BC027614|CPXCR1|53336|CPX chromosome region, candidate 1##BC117398|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC117400|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_138960|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101144|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC101145|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##AF497480|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##BC029920|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##HQ258115|TGIF2LX|90316|TGFB-induced factor homeobox 2-like, X-linked##NM_080832|PABPC5|140886|poly(A) binding protein, cytoplasmic 5	0.992889	CTCF.p2:10:0.993
chr1	159915526	159915634	reg1037327.p2	3.538	+	TSC_hg19_v1_chr1_-_159915401 AB037776 BC030141 NM_001135050 NM_020789 AY358128	-186	-	TSC_hg19_v1_chr1_-_159895294 BC002616 D21261 GU727636 NM_003564 AK291562 AK298654	-20293	-	BC009357 TSC_hg19_v1_chr1_-_159895269	-20315	-	BC074754 BC070213 AY358801 AF275725 AY034613 NM_001146172 NM_001146173 NM_033438	8422	-	CU676470 TSC_hg19_v1_chr1_-_160001654 BC001803	86016	-	AB028127 TSC_hg19_v1_chr1_-_160001781 BC019865 AK074655 BC011395 NM_145167	86174	-	AB037776|IGSF9|57549|immunoglobulin superfamily, member 9##BC030141|IGSF9|57549|immunoglobulin superfamily, member 9##NM_001135050|IGSF9|57549|immunoglobulin superfamily, member 9##NM_020789|IGSF9|57549|immunoglobulin superfamily, member 9##AY358128|IGSF9|57549|immunoglobulin superfamily, member 9##BC002616|TAGLN2|8407|transgelin 2##D21261|TAGLN2|8407|transgelin 2##GU727636|TAGLN2|8407|transgelin 2##NM_003564|TAGLN2|8407|transgelin 2##AK291562|TAGLN2|8407|transgelin 2##AK298654|TAGLN2|8407|transgelin 2##BC009357|TAGLN2|8407|transgelin 2##BC074754|SLAMF9|89886|SLAM family member 9##BC070213|SLAMF9|89886|SLAM family member 9##AY358801|SLAMF9|89886|SLAM family member 9##AF275725|SLAMF9|89886|SLAM family member 9##AY034613|SLAMF9|89886|SLAM family member 9##NM_001146172|SLAMF9|89886|SLAM family member 9##NM_001146173|SLAMF9|89886|SLAM family member 9##NM_033438|SLAMF9|89886|SLAM family member 9##BC001803|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AB028127|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC019865|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##AK074655|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##BC011395|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M##NM_145167|PIGM|93183|phosphatidylinositol glycan anchor biosynthesis, class M	0.820154	CTCF.p2:16:0.820
chr12	111115246	111115330	reg1032976.p2	3.538	+	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	-63363	+	AK124744 TSC_hg19_v1_chr12_-_111021124	-94162	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	-94218	-	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	11670	-	AK293543 NM_001040107	12311	-	L07395 AK297882 AB590512 EU831993 EU832086 TSC_hg19_v1_chr12_-_111180593	65258	-	AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1##L07395|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK297882|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU831993|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU832086|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme	0.0	
chr12	133066317	133066399	reg1039217.p1	3.538	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-160501	-	AF458594 NM_021808	-375786	-	TSC_hg19_v1_chr12_+_132629014 BC071958 CU687200 DQ892518 DQ895730 BC007893	-437302	+	NM_001142641	798	+	NM_001195520	120678	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	129046	+	BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC071958|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ892518|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ895730|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC007893|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##NM_001142641|FBRSL1|57666|fibrosin-like 1##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2	0.0	
chr1	235492601	235492668	reg1043266.p2	3.538	+	AK309831 TSC_hg19_v1_chr1_+_235492306	-339	+	NM_001037277 TSC_hg19_v1_chr1_+_235491884 AF057698 AK025139 BC005252 AK293278 AB019036 AB016043 AF125394	-773	+	TSC_hg19_v1_chr1_-_235491495 AF214114 AK057552 NM_016374 NM_031371	-1122	-	NM_001079515 NM_003193 TSC_hg19_v1_chr1_+_235530744 AK296185 AK298050	38109	+	TSC_hg19_v1_chr1_+_235530768 AK093397 AK292287 BC008654	38138	+	TSC_hg19_v1_chr1_-_235667473 AK091497	174875	-	NM_001037277|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AF057698|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AK025139|GGPS1|9453|geranylgeranyl diphosphate synthase 1##BC005252|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AK293278|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AB019036|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AB016043|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AF125394|GGPS1|9453|geranylgeranyl diphosphate synthase 1##AF214114|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##AK057552|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##NM_016374|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##NM_031371|ARID4B|51742|AT rich interactive domain 4B (RBP1-like)##NM_001079515|TBCE|6905|tubulin folding cofactor E##NM_003193|TBCE|6905|tubulin folding cofactor E##AK296185|TBCE|6905|tubulin folding cofactor E##AK298050|TBCE|6905|tubulin folding cofactor E##AK093397|TBCE|6905|tubulin folding cofactor E##AK292287|TBCE|6905|tubulin folding cofactor E##BC008654|TBCE|6905|tubulin folding cofactor E##AK091497|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2	0.0	
chr13	50700608	50700688	reg1044724.p1	3.538	+	TSC_hg19_v1_chr13_-_50699781 AF380424	-833	-	AJ412023 AJ412024 AJ412025 AJ412026 AJ412038 AJ412039 AJ412054 AJ412055 AJ412056 AJ412057 AJ412058 AJ412059 AJ412060 AJ412061 AJ412062 Y15227 TSC_hg19_v1_chr13_+_50656364 BC004131 AK312167 BC020692 AK095311	-44303	+	TSC_hg19_v1_chr13_-_50656128 BC038090 AF264787 Y15228 BC022349 BC006995 BC026275 BC030971 BC070292 BC055417 BC017819 BC022282	-44499	-	AJ412041 AJ412042 AJ412043 TSC_hg19_v1_chr13_+_50760088	59405	+	AY357595 BC104892 BC112009 NM_198989 AK303567 AK126830	717304	-	NM_001142279 NM_024570 TSC_hg19_v1_chr13_+_51483898	783208	+	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AJ412023|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412024|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412061|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412062|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##Y15227|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC020692|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AK095311|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC038090|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AF264787|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##Y15228|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##BC070292|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##BC055417|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7##AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_001142279|RNASEH2B|79621|ribonuclease H2, subunit B##NM_024570|RNASEH2B|79621|ribonuclease H2, subunit B	0.01361	
chr16	8908484	8908641	reg1037234.p2	3.538	+	NM_000303 TSC_hg19_v1_chr16_+_8891675 AK296123 U85773 AK300785 AK291537 AK299979 AK311035 AK312532 AK304320 AK296630 BC008310	-16864	+	TSC_hg19_v1_chr16_-_8891497 BC015912 AK225638 AL080088 AK314404 NM_015421 AK093383	-17017	-	TSC_hg19_v1_chr16_+_8814575 AK290501 NM_001127448 AK310771	-93982	+	NM_001042476 BC001333	53690	-	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	54298	-	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	148733	-	NM_000303|PMM2|5373|phosphomannomutase 2##U85773|PMM2|5373|phosphomannomutase 2##AK300785|PMM2|5373|phosphomannomutase 2##AK291537|PMM2|5373|phosphomannomutase 2##AK299979|PMM2|5373|phosphomannomutase 2##AK311035|PMM2|5373|phosphomannomutase 2##AK312532|PMM2|5373|phosphomannomutase 2##AK304320|PMM2|5373|phosphomannomutase 2##AK296630|PMM2|5373|phosphomannomutase 2##BC008310|PMM2|5373|phosphomannomutase 2##BC015912|TMEM186|25880|transmembrane protein 186##AK225638|TMEM186|25880|transmembrane protein 186##AL080088|TMEM186|25880|transmembrane protein 186##AK314404|TMEM186|25880|transmembrane protein 186##NM_015421|TMEM186|25880|transmembrane protein 186##AK093383|TMEM186|25880|transmembrane protein 186##AK290501|ABAT|18|4-aminobutyrate aminotransferase##NM_001127448|ABAT|18|4-aminobutyrate aminotransferase##AK310771|ABAT|18|4-aminobutyrate aminotransferase##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)	0.0	
chr17	3875562	3875680	reg1034758.p1	3.538	+	AB462957 DQ893317 EU176809 Z69881 TSC_hg19_v1_chr17_-_3867744 AF068220 BC035729 AK292716 NM_005173 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958	-7920	-	NM_002558	-55662	-	X83688 U45448 BC044657 BC027949 TSC_hg19_v1_chr17_-_3819762 AK310981 AK313264 AF020498	-55873	-	AB384472 TSC_hg19_v1_chr17_-_4046240	170594	-	TSC_hg19_v1_chr17_-_4046246 AB007859 BC151836 NM_015113	170631	-	TSC_hg19_v1_chr17_-_4046308 AK127482	170689	-	DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_002558|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##X83688|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##U45448|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC044657|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC027949|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AK313264|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AF020498|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	0.0	
chr19	10664964	10665039	reg1041112.p2	3.538	+	TSC_hg19_v1_chr19_+_10654592 AK056210 AK314712 AK316454 BC068992 AK223383 BC007639 NM_032885 AJ312332 CU686689	-10323	+	AK294676 TSC_hg19_v1_chr19_+_10654589	-10421	+	AK074661 NM_001166215	-36365	-	BC009303 TSC_hg19_v1_chr19_-_10676685 AL833189 AK300780	11665	-	TSC_hg19_v1_chr19_-_10676697 AK093879 AX748348 NM_023008 AK300850	11696	-	CR542158 CU674892 U20498 DQ892872 DQ892951 DQ896120 AB464505 U49399 U40343 TSC_hg19_v1_chr19_-_10679530	14428	-	AK056210|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK314712|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK316454|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##BC068992|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK223383|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##BC007639|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##NM_032885|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AJ312332|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK294676|ATG4D|84971|ATG4 autophagy related 4 homolog D (S. cerevisiae)##AK074661|S1PR5|53637|sphingosine-1-phosphate receptor 5##NM_001166215|S1PR5|53637|sphingosine-1-phosphate receptor 5##BC009303|KRI1|65095|KRI1 homolog (S. cerevisiae)##AL833189|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK300780|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK093879|KRI1|65095|KRI1 homolog (S. cerevisiae)##NM_023008|KRI1|65095|KRI1 homolog (S. cerevisiae)##AK300850|KRI1|65095|KRI1 homolog (S. cerevisiae)##CR542158|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U20498|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892872|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ892951|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##DQ896120|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U49399|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)##U40343|CDKN2D|1032|cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	0.0	
chr22	38610559	38610635	reg1035009.p1	3.538	+	NM_001161573	-11571	+	BC015037 TSC_hg19_v1_chr22_+_38598094 AB025247	-12511	+	NM_001161572 NM_001161574 NM_012323 TSC_hg19_v1_chr22_+_38597996 AK002001 BC067751 AK300932 AJ010857	-12620	+	NM_001195071	58072	-	TSC_hg19_v1_chr22_-_38668943 CR749859	58348	-	TSC_hg19_v1_chr22_-_38669012 BC015489 AB097053 AK309071 AK292652 NM_001195072 NM_012264	58411	-	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001195071|TMEM184B|25829|transmembrane protein 184B##CR749859|TMEM184B|25829|transmembrane protein 184B##BC015489|TMEM184B|25829|transmembrane protein 184B##AB097053|TMEM184B|25829|transmembrane protein 184B##AK309071|TMEM184B|25829|transmembrane protein 184B##AK292652|TMEM184B|25829|transmembrane protein 184B##NM_001195072|TMEM184B|25829|transmembrane protein 184B##NM_012264|TMEM184B|25829|transmembrane protein 184B	0.170683	
chr2	75062898	75063078	reg1022092.p1	3.538	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-737	-	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	-1728	+	AF086198 NM_000189	-3207	+	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	122797	+	AK289765 NM_001058 NM_015727	363640	-	BC016157 TSC_hg19_v1_chr2_-_75788066	725059	-	AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2##AF086198|HK2|3099|hexokinase 2##NM_000189|HK2|3099|hexokinase 2##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##BC016157|FAM176A|84141|family with sequence similarity 176, member A	0.0	
chr3	31290052	31290151	reg1035694.p2	3.538	+	AL832766 NM_207359	-353949	-	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-641698	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-642079	+	TSC_hg19_v1_chr3_+_31574119 AK311488	284029	+	TSC_hg19_v1_chr3_+_31574468 AK074587	284348	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	284381	+	AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.0	
chr4	2763350	2763438	reg1039978.p2	3.538	+	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	-5331	-	AK026176 NM_001161527	-5644	-	AB000459 AB000460 AB000461 NM_003704 BC136646 BC144337 BC144339 BC144340	-136221	+	TSC_hg19_v1_chr4_+_2794755 AK225497 NM_001122681 BC022996	31341	+	AK312286 TSC_hg19_v1_chr4_+_2794811 AK307106	31428	+	NM_001145855 TSC_hg19_v1_chr4_+_2813962	50560	+	AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2##AK026176|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001161527|TNIP2|79155|TNFAIP3 interacting protein 2##AB000459|FAM193A|8603|family with sequence similarity 193, member A##AB000460|FAM193A|8603|family with sequence similarity 193, member A##AB000461|FAM193A|8603|family with sequence similarity 193, member A##NM_003704|FAM193A|8603|family with sequence similarity 193, member A##BC136646|FAM193A|8603|family with sequence similarity 193, member A##BC144337|FAM193A|8603|family with sequence similarity 193, member A##BC144339|FAM193A|8603|family with sequence similarity 193, member A##BC144340|FAM193A|8603|family with sequence similarity 193, member A##AK225497|SH3BP2|6452|SH3-domain binding protein 2##NM_001122681|SH3BP2|6452|SH3-domain binding protein 2##BC022996|SH3BP2|6452|SH3-domain binding protein 2##AK312286|SH3BP2|6452|SH3-domain binding protein 2##AK307106|SH3BP2|6452|SH3-domain binding protein 2##NM_001145855|SH3BP2|6452|SH3-domain binding protein 2	0.365965	CTCF.p2:4:0.366
chr6_mann_hap4	2137933	2138069	reg1035113.p1	3.538	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.997496	CTCF.p2:-6:0.997
chr7	10676833	10676966	reg1038184.p1	3.538	+	AK315141 TSC_hg19_v1_chr7_+_8474016 AK091655 BC047505 AK296248	-2202779	+	AB047362 AB073665 NM_152745 TSC_hg19_v1_chr7_+_8473633	-2203289	+	TSC_hg19_v1_chr7_+_8473238 AK095624	-2203661	+	CR407618 CR541716 TSC_hg19_v1_chr7_-_10979730 AF201077 BC101794 BC101796	302810	-	AK130950 TSC_hg19_v1_chr7_-_10979760 AK024837 U94586 BC105295 NM_002489	302885	-	TSC_hg19_v1_chr7_+_11013534 AK294419 NM_014660 AK295461 AB018326 BC152414	336611	+	AK315141|NXPH1|30010|neurexophilin 1##AK091655|NXPH1|30010|neurexophilin 1##BC047505|NXPH1|30010|neurexophilin 1##AK296248|NXPH1|30010|neurexophilin 1##AB047362|NXPH1|30010|neurexophilin 1##AB073665|NXPH1|30010|neurexophilin 1##NM_152745|NXPH1|30010|neurexophilin 1##AK095624|NXPH1|30010|neurexophilin 1##CR407618|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##CR541716|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AF201077|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101794|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC101796|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK130950|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK024837|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##U94586|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##BC105295|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##NM_002489|NDUFA4|4697|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4, 9kDa##AK294419|PHF14|9678|PHD finger protein 14##NM_014660|PHF14|9678|PHD finger protein 14##AK295461|PHF14|9678|PHD finger protein 14##AB018326|PHF14|9678|PHD finger protein 14##BC152414|PHF14|9678|PHD finger protein 14	0.659137	CTCF.p2:-1:0.659
chr8	41910053	41910124	reg1031520.p2	3.538	+	U47742 BC142659 BC142959 NM_001099412 NM_001099413 NM_006766 TSC_hg19_v1_chr8_-_41909506	-589	-	TSC_hg19_v1_chr8_-_41754260 AB209418 NM_001142446	-155778	-	AK026601 TSC_hg19_v1_chr8_+_41685847	-224263	+	NM_001134296 NM_006803 AK315228 BX648354 BC056398 BX648390 D38293	100445	+	X07393 M15518 BC007231 BC002795 BC013968 BC018636 TSC_hg19_v1_chr8_-_42065084 AK297738 AK297937 AK299205 AK300984 AK313342 BC095403 X13097 X02901	155000	-	AK289387 AK290575 NM_000930 NM_033011 TSC_hg19_v1_chr8_-_42065195	155106	-	U47742|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142659|KAT6A|7994|K(lysine) acetyltransferase 6A##BC142959|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099412|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_001099413|KAT6A|7994|K(lysine) acetyltransferase 6A##NM_006766|KAT6A|7994|K(lysine) acetyltransferase 6A##AB209418|ANK1|286|ankyrin 1, erythrocytic##NM_001142446|ANK1|286|ankyrin 1, erythrocytic##NM_001134296|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##NM_006803|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##AK315228|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648354|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BC056398|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##BX648390|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##D38293|AP3M2|10947|adaptor-related protein complex 3, mu 2 subunit##X07393|PLAT|5327|plasminogen activator, tissue##M15518|PLAT|5327|plasminogen activator, tissue##BC007231|PLAT|5327|plasminogen activator, tissue##BC002795|PLAT|5327|plasminogen activator, tissue##BC013968|PLAT|5327|plasminogen activator, tissue##BC018636|PLAT|5327|plasminogen activator, tissue##AK297738|PLAT|5327|plasminogen activator, tissue##AK297937|PLAT|5327|plasminogen activator, tissue##AK299205|PLAT|5327|plasminogen activator, tissue##AK300984|PLAT|5327|plasminogen activator, tissue##AK313342|PLAT|5327|plasminogen activator, tissue##BC095403|PLAT|5327|plasminogen activator, tissue##X13097|PLAT|5327|plasminogen activator, tissue##X02901|PLAT|5327|plasminogen activator, tissue##AK289387|PLAT|5327|plasminogen activator, tissue##AK290575|PLAT|5327|plasminogen activator, tissue##NM_000930|PLAT|5327|plasminogen activator, tissue##NM_033011|PLAT|5327|plasminogen activator, tissue	0.0	
chr9	134186336	134186501	reg1040010.p2	3.538	+	TSC_hg19_v1_chr9_+_134165108 AK075207 NM_032728 BC006362 AK027568 AK315502 AB385550	-21190	+	BC049388 NM_033387 AK095423	-34499	-	TSC_hg19_v1_chr9_+_134001016 D14689 AB159230	-185368	+	TSC_hg19_v1_chr9_+_134269515 BC002872	83148	+	NM_013318 TSC_hg19_v1_chr9_+_134305488	119064	+	CU678266 TSC_hg19_v1_chr9_+_134305548	119122	+	AK075207|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##NM_032728|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC006362|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK027568|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##AK315502|PPAPDC3|84814|phosphatidic acid phosphatase type 2 domain containing 3##BC049388|FAM78A|286336|family with sequence similarity 78, member A##NM_033387|FAM78A|286336|family with sequence similarity 78, member A##AK095423|FAM78A|286336|family with sequence similarity 78, member A##D14689|NUP214|8021|nucleoporin 214kDa##AB159230|NUP214|8021|nucleoporin 214kDa##BC002872|PRRC2B|84726|proline-rich coiled-coil 2B##NM_013318|PRRC2B|84726|proline-rich coiled-coil 2B	0.610387	CTCF.p2:82:0.610
chr10	92639766	92639947	reg1018753.p1	3.537	+	TSC_hg19_v1_chr10_+_92631730 NM_001104546 NM_006413 AL833628 AK296196 U77665 AK312900 AK225532 DQ893181 DQ896488	-8134	+	TSC_hg19_v1_chr10_+_92631241 BC006991	-8599	+	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	-22123	-	AB528537 DQ892852 DQ896099 AY903446 BC005191 AK290960 BC018667 TSC_hg19_v1_chr10_-_92680845	40960	-	X83703 NM_014391	41172	-	TSC_hg19_v1_chr10_+_92922749 BC007377 BC051845	282906	+	NM_001104546|RPP30|10556|ribonuclease P/MRP 30kDa subunit##NM_006413|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AL833628|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK296196|RPP30|10556|ribonuclease P/MRP 30kDa subunit##U77665|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK312900|RPP30|10556|ribonuclease P/MRP 30kDa subunit##AK225532|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ893181|RPP30|10556|ribonuclease P/MRP 30kDa subunit##DQ896488|RPP30|10556|ribonuclease P/MRP 30kDa subunit##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##DQ892852|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##DQ896099|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AY903446|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC005191|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##AK290960|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC018667|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##X83703|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##NM_014391|ANKRD1|27063|ankyrin repeat domain 1 (cardiac muscle)##BC007377|PCGF5|84333|polycomb group ring finger 5##BC051845|PCGF5|84333|polycomb group ring finger 5	0.0	
chr13	71197528	71197640	reg1039347.p1	3.537	+	AF252283 TSC_hg19_v1_chr13_-_70682585 AB040923 AK291435 NM_020866	-515043	-	TSC_hg19_v1_chr13_-_67804469 BX537422 AK054661 NM_020403 NM_203487 BC150296	-3393080	-	AK289924 NM_022843	-9207930	-	TSC_hg19_v1_chr13_-_72440143 AK001000 BC021219 AF069509	1242675	-	TSC_hg19_v1_chr13_-_72440621 AJ005670 AL079278	1243179	-	TSC_hg19_v1_chr13_-_72441343 AF102546 AF356492 NM_004392 NM_080759 NM_080760	1243850	-	AF252283|KLHL1|57626|kelch-like 1 (Drosophila)##AB040923|KLHL1|57626|kelch-like 1 (Drosophila)##AK291435|KLHL1|57626|kelch-like 1 (Drosophila)##NM_020866|KLHL1|57626|kelch-like 1 (Drosophila)##BX537422|PCDH9|5101|protocadherin 9##AK054661|PCDH9|5101|protocadherin 9##NM_020403|PCDH9|5101|protocadherin 9##NM_203487|PCDH9|5101|protocadherin 9##BC150296|PCDH9|5101|protocadherin 9##AK289924|PCDH20|64881|protocadherin 20##NM_022843|PCDH20|64881|protocadherin 20##AK001000|DACH1|1602|dachshund homolog 1 (Drosophila)##BC021219|DACH1|1602|dachshund homolog 1 (Drosophila)##AF069509|DACH1|1602|dachshund homolog 1 (Drosophila)##AJ005670|DACH1|1602|dachshund homolog 1 (Drosophila)##AL079278|DACH1|1602|dachshund homolog 1 (Drosophila)##AF102546|DACH1|1602|dachshund homolog 1 (Drosophila)##AF356492|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_004392|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080759|DACH1|1602|dachshund homolog 1 (Drosophila)##NM_080760|DACH1|1602|dachshund homolog 1 (Drosophila)	0.0	
chr14	73101785	73101851	reg1046279.p1	3.537	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-701952	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-702665	+	AK294895 NM_001204423	-703002	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	258990	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	291317	+	AK098542 AF311602 NM_178441	351839	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.119864	
chr19	50073373	50073536	reg1005084.p1	3.537	+	TSC_hg19_v1_chr19_+_50031259 AY358423 BC013436	-42193	+	AY195859 NM_020650	-42580	+	TSC_hg19_v1_chr19_+_50016643 AK075510 BC020421 AK299124 AB463631 DQ893544 DQ893808 BT006828	-56822	+	BC047314 TSC_hg19_v1_chr19_-_50083811 BC009299 BC010077 NM_015953 AK092444 AX747549 AK291535 AK300720	10347	-	AF132959 TSC_hg19_v1_chr19_-_50083814	10360	-	NM_000951 BC026032	11153	+	AY358423|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##BC013436|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##AY195859|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##NM_020650|RCN3|57333|reticulocalbin 3, EF-hand calcium binding domain##AK075510|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BC020421|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##AK299124|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##DQ893544|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##DQ893808|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BT006828|FCGRT|2217|Fc fragment of IgG, receptor, transporter, alpha##BC047314|NOSIP|51070|nitric oxide synthase interacting protein##BC009299|NOSIP|51070|nitric oxide synthase interacting protein##BC010077|NOSIP|51070|nitric oxide synthase interacting protein##NM_015953|NOSIP|51070|nitric oxide synthase interacting protein##AK092444|NOSIP|51070|nitric oxide synthase interacting protein##AK291535|NOSIP|51070|nitric oxide synthase interacting protein##AK300720|NOSIP|51070|nitric oxide synthase interacting protein##AF132959|NOSIP|51070|nitric oxide synthase interacting protein##NM_000951|PRRG2|5639|proline rich Gla (G-carboxyglutamic acid) 2##BC026032|PRRG2|5639|proline rich Gla (G-carboxyglutamic acid) 2	0.985344	
chr2	225224468	225224562	reg1038371.p1	3.537	+	TSC_hg19_v1_chr2_-_224904004 BC015663 AK225823 AK297588 AK312499 NM_001136528 NM_006216	-320345	-	AK295564 NM_001136530	-321175	-	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	-357887	-	BC025754 NM_001122779 NM_024785 AK026399	42215	-	AF052147 BC031844 TSC_hg19_v1_chr2_-_225370764	146213	-	U58089 TSC_hg19_v1_chr2_-_225378353	153821	-	BC015663|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK225823|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK297588|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK312499|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136528|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_006216|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##BC025754|FAM124B|79843|family with sequence similarity 124B##NM_001122779|FAM124B|79843|family with sequence similarity 124B##NM_024785|FAM124B|79843|family with sequence similarity 124B##AK026399|FAM124B|79843|family with sequence similarity 124B##AF052147|CUL3|8452|cullin 3##BC031844|CUL3|8452|cullin 3##U58089|CUL3|8452|cullin 3	0.0	
chr22	40593040	40593116	reg1022980.p2	3.537	+	TSC_hg19_v1_chr22_+_40573938 NM_001162501 NM_015088 AK296590 AK294519 AB029016	-19079	+	TSC_hg19_v1_chr22_+_40441403 BC028626	-151646	+	TSC_hg19_v1_chr22_+_40440774 NM_001024843	-152169	+	TSC_hg19_v1_chr22_+_40742532 NM_000026 NM_001123378 AF067853 AF067854 AK293722 CR456368 AK298187 AK291091 AK300705 BC000253 BC018881 AK225042 CU674104 AB462938 CU012935 CU013223 DQ893326 DQ896642 X65867 S60710	149454	+	TSC_hg19_v1_chr22_+_40766609 NM_015705 AK309400	173511	+	TSC_hg19_v1_chr22_+_40766619 AK295469	173541	+	NM_001162501|TNRC6B|23112|trinucleotide repeat containing 6B##NM_015088|TNRC6B|23112|trinucleotide repeat containing 6B##AK296590|TNRC6B|23112|trinucleotide repeat containing 6B##AK294519|TNRC6B|23112|trinucleotide repeat containing 6B##AB029016|TNRC6B|23112|trinucleotide repeat containing 6B##BC028626|TNRC6B|23112|trinucleotide repeat containing 6B##NM_001024843|TNRC6B|23112|trinucleotide repeat containing 6B##NM_000026|ADSL|158|adenylosuccinate lyase##NM_001123378|ADSL|158|adenylosuccinate lyase##AF067853|ADSL|158|adenylosuccinate lyase##AF067854|ADSL|158|adenylosuccinate lyase##CR456368|ADSL|158|adenylosuccinate lyase##AK298187|ADSL|158|adenylosuccinate lyase##AK291091|ADSL|158|adenylosuccinate lyase##AK300705|ADSL|158|adenylosuccinate lyase##BC000253|ADSL|158|adenylosuccinate lyase##BC018881|ADSL|158|adenylosuccinate lyase##AK225042|ADSL|158|adenylosuccinate lyase##CU012935|ADSL|158|adenylosuccinate lyase##CU013223|ADSL|158|adenylosuccinate lyase##DQ893326|ADSL|158|adenylosuccinate lyase##DQ896642|ADSL|158|adenylosuccinate lyase##X65867|ADSL|158|adenylosuccinate lyase##S60710|ADSL|158|adenylosuccinate lyase##NM_015705|SGSM3|27352|small G protein signaling modulator 3##AK309400|SGSM3|27352|small G protein signaling modulator 3##AK295469|SGSM3|27352|small G protein signaling modulator 3	0.0	
chr2	47615403	47615488	reg1003342.p1	3.537	+	TSC_hg19_v1_chr2_+_47596449 AK026585 BC014785 M26481 M32325 X14758 M33011 M32306 DQ891338 DQ894520 CR542259 CR542283	-18900	+	NM_002354 TSC_hg19_v1_chr2_+_47596376	-19103	+	TSC_hg19_v1_chr2_-_47403685 NM_001743	-211736	-	TSC_hg19_v1_chr2_+_47630218 AK304496	14759	+	TSC_hg19_v1_chr2_+_47630289 BC012599 NM_000251 U04045 AK222860 L47574 L47575 L47576 L47577 L47578 L47579 L47580 L47581 L47582 L47583	14823	+	TSC_hg19_v1_chr2_+_47630294 AK223284 AK296831 AK297763 BX649122 BC021566 AK311330 DQ892558 DQ895772 AB489153 BC001122 U03911 CU692370 DQ648894	14872	+	AK026585|EPCAM|4072|epithelial cell adhesion molecule##BC014785|EPCAM|4072|epithelial cell adhesion molecule##M26481|EPCAM|4072|epithelial cell adhesion molecule##M32325|EPCAM|4072|epithelial cell adhesion molecule##X14758|EPCAM|4072|epithelial cell adhesion molecule##M33011|EPCAM|4072|epithelial cell adhesion molecule##M32306|EPCAM|4072|epithelial cell adhesion molecule##DQ891338|EPCAM|4072|epithelial cell adhesion molecule##DQ894520|EPCAM|4072|epithelial cell adhesion molecule##CR542259|EPCAM|4072|epithelial cell adhesion molecule##CR542283|EPCAM|4072|epithelial cell adhesion molecule##NM_002354|EPCAM|4072|epithelial cell adhesion molecule##NM_001743|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK304496|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC012599|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##NM_000251|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U04045|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK222860|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47574|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47575|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47576|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47577|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47578|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47579|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47580|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47581|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47582|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47583|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK223284|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK296831|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK297763|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BX649122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC021566|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK311330|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ892558|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ895772|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC001122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U03911|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ648894|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)	0.0	
chr2	64627078	64627172	reg1037071.p1	3.537	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-255601	-	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	-380620	-	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	-380863	-	TSC_hg19_v1_chr2_+_64681295 NM_014181	54175	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	54523	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	124359	+	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin	0.0	
chr5	124341828	124341956	reg1036113.p1	3.537	+	BC131507 AB033107 BC151226 NM_020747	-261104	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1494010	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1582748	-	NM_001146319 AK316288 AK300154	1353922	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1416951	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	1417295	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.0	
chr5	137931214	137931322	reg1042420.p1	3.537	+	NM_004134	-19951	-	AK222758 TSC_hg19_v1_chr5_-_137911101 BC000478 BC024034 AK297897 AK293990 L11066 AK315177	-20180	-	BC030634 CU674234 TSC_hg19_v1_chr5_-_137911029 AB463063 EU446981 AK297795 L15189	-20249	-	TSC_hg19_v1_chr5_+_138089107 NM_001903 AK296708 AK300439 D14705	157826	+	TSC_hg19_v1_chr5_+_138089137 AK094151 D13866 BC000385 AK304267	157863	+	AK309790 TSC_hg19_v1_chr5_-_138211025 AB007876 BC028172 AK291064 AK297332	279745	-	NM_004134|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK222758|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC000478|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC024034|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK297897|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK293990|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##L11066|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK315177|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##BC030634|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##EU446981|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##AK297795|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##L15189|HSPA9|3313|heat shock 70kDa protein 9 (mortalin)##NM_001903|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK296708|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK300439|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##D14705|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK094151|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##D13866|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##BC000385|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK304267|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa	0.645776	CTCF.p2:4:0.646
chr6	157756066	157756172	reg1043199.p1	3.537	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-10902	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-11535	-	TSC_hg19_v1_chr6_+_157099876 AF253515	-656244	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	46420	+	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	488170	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	488255	+	NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9	0.0	
chr7	142219135	142219247	reg1036386.p2	3.537	+	AY358487 BC035384 AK122940 NM_001001317	-261330	-	TSC_hg19_v1_chr7_+_141811548 AK000645 BC111973 BC111975	-407652	+	AF016833 NM_004668 BC120872	-523499	+	NM_001190487	154939	+	NM_002769 AK293375 BC128225 BC128226 CR627200 AK312199 BC103998 M22612 AB528723 DQ778083 DQ846873	238135	+	M12426 TSC_hg19_v1_chr7_+_142495248	276004	+	AY358487|PRSS58|136541|protease, serine, 58##BC035384|PRSS58|136541|protease, serine, 58##AK122940|PRSS58|136541|protease, serine, 58##NM_001001317|PRSS58|136541|protease, serine, 58##AK000645|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111973|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##BC111975|LOC93432|93432|maltase-glucoamylase (alpha-glucosidase) pseudogene##AF016833|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_004668|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##BC120872|MGAM|8972|maltase-glucoamylase (alpha-glucosidase)##NM_001190487|MTRNR2L6|100463482|MT-RNR2-like 6##NM_002769|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK293375|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC128226|PRSS1|5644|protease, serine, 1 (trypsin 1)##CR627200|PRSS1|5644|protease, serine, 1 (trypsin 1)##AK312199|PRSS1|5644|protease, serine, 1 (trypsin 1)##BC103998|PRSS2|5645|protease, serine, 2 (trypsin 2)##M22612|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ778083|PRSS1|5644|protease, serine, 1 (trypsin 1)##DQ846873|PRSS2|5645|protease, serine, 2 (trypsin 2)	0.977154	CTCF.p2:2:0.977
chr8	37134119	37134258	reg1039797.p2	3.537	+	NM_001031836 AK302391 BC028701	-492318	+	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	-2041201	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-3676693	-	TSC_hg19_v1_chr8_-_37457377 AK025743	323180	-	TSC_hg19_v1_chr8_+_37553300 AK024361 NM_025069 BC032534	419129	+	TSC_hg19_v1_chr8_+_37594112 NM_001003791 NM_007175 AL442077	459918	+	NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK025743|LOC157860|157860|uncharacterized LOC157860##AK024361|ZNF703|80139|zinc finger protein 703##NM_025069|ZNF703|80139|zinc finger protein 703##BC032534|ZNF703|80139|zinc finger protein 703##NM_001003791|ERLIN2|11160|ER lipid raft associated 2##NM_007175|ERLIN2|11160|ER lipid raft associated 2##AL442077|ERLIN2|11160|ER lipid raft associated 2	0.0	
chr10	125151794	125151907	reg1030223.p1	3.536	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-237494	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-237904	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-237952	+	AJ505757 NM_153442 BC112011 BC113462	274027	+	BC137492 BC146862 AY358565 NM_198148	499646	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	700049	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.0	
chr10	4055877	4056055	reg1034646.p1	3.536	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-228457	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-228655	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-840961	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	812452	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	949548	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	949657	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr1	10458798	10458878	reg1039070.p2	3.536	+	TSC_hg19_v1_chr1_+_10270680 AK308121 NM_015074 NM_183416 AF257176 AY139835	-188067	+	AB014584 TSC_hg19_v1_chr1_+_10093218	-365625	+	TSC_hg19_v1_chr1_+_10093015 AB028839 NM_001105562 NM_006048	-365823	+	NM_002631 TSC_hg19_v1_chr1_+_10459125 AK300952 AK290404 AK296889 AK303898 AK304423 BC000368 U30255 AB463169 AK298830	291	+	AF521016 NM_198544 NM_199006 NM_199294	31320	+	TSC_hg19_v1_chr1_+_10490434 AF516753 BC029430	31655	+	AK308121|KIF1B|23095|kinesin family member 1B##NM_015074|KIF1B|23095|kinesin family member 1B##NM_183416|KIF1B|23095|kinesin family member 1B##AF257176|KIF1B|23095|kinesin family member 1B##AY139835|KIF1B|23095|kinesin family member 1B##AB014584|UBE4B|10277|ubiquitination factor E4B##AB028839|UBE4B|10277|ubiquitination factor E4B##NM_001105562|UBE4B|10277|ubiquitination factor E4B##NM_006048|UBE4B|10277|ubiquitination factor E4B##NM_002631|PGD|5226|phosphogluconate dehydrogenase##AK300952|PGD|5226|phosphogluconate dehydrogenase##AK290404|PGD|5226|phosphogluconate dehydrogenase##AK296889|PGD|5226|phosphogluconate dehydrogenase##AK303898|PGD|5226|phosphogluconate dehydrogenase##AK304423|PGD|5226|phosphogluconate dehydrogenase##BC000368|PGD|5226|phosphogluconate dehydrogenase##U30255|PGD|5226|phosphogluconate dehydrogenase##AK298830|PGD|5226|phosphogluconate dehydrogenase##AF521016|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_198544|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199006|APITD1-CORT|100526739|APITD1-CORT readthrough##NM_199294|APITD1|378708|apoptosis-inducing, TAF9-like domain 1##AF516753|APITD1-CORT|100526739|APITD1-CORT readthrough##BC029430|APITD1|378708|apoptosis-inducing, TAF9-like domain 1	0.0	
chr14	65230559	65230711	reg1043727.p2	3.536	+	TSC_hg19_v1_chr14_+_65171243 BC129952 BC129953	-59357	+	TSC_hg19_v1_chr14_+_65171178 BX248779 NM_015549	-59463	+	TSC_hg19_v1_chr14_+_65016678 AK058044 NM_172365 BC068989	-213990	+	AB384944 BC136284 BC136285 NM_000347 NM_001024858	59203	-	J05500 AB209415 TSC_hg19_v1_chr14_-_65346722	116008	-	NM_001202558 NM_001202559 NM_001204063 NM_001204064 NM_145165 BC020550 TSC_hg19_v1_chr14_+_65381175 AK315905 AF060510 AK057626	150492	+	BC129952|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BC129953|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##BX248779|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##NM_015549|PLEKHG3|26030|pleckstrin homology domain containing, family G (with RhoGef domain) member 3##AK058044|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##NM_172365|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##BC068989|PPP1R36|145376|protein phosphatase 1, regulatory subunit 36##BC136284|SPTB|6710|spectrin, beta, erythrocytic##BC136285|SPTB|6710|spectrin, beta, erythrocytic##NM_000347|SPTB|6710|spectrin, beta, erythrocytic##NM_001024858|SPTB|6710|spectrin, beta, erythrocytic##J05500|SPTB|6710|spectrin, beta, erythrocytic##AB209415|SPTB|6710|spectrin, beta, erythrocytic##NM_001202558|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##NM_001202559|CHURC1-FNTB|100529261|CHURC1-FNTB readthrough##NM_001204063|CHURC1|91612|churchill domain containing 1##NM_001204064|CHURC1|91612|churchill domain containing 1##NM_145165|CHURC1|91612|churchill domain containing 1##BC020550|CHURC1|91612|churchill domain containing 1##AK315905|CHURC1|91612|churchill domain containing 1##AF060510|CHURC1|91612|churchill domain containing 1##AK057626|CHURC1|91612|churchill domain containing 1	0.609465	CTCF.p2:21:0.609
chr17	62774131	62774197	reg1041683.p1	3.536	+	TSC_hg19_v1_chr17_-_62658414 CR936721 NM_022739	-115799	-	TSC_hg19_v1_chr17_-_62658187 AY014180	-115982	-	AF310676 AB385561 AF301463 BC051283 BC093876 BC111945 TSC_hg19_v1_chr17_-_62658136	-116097	-	BC032382 TSC_hg19_v1_chr17_-_62777683 AK055342 BC120976 BC120977	3558	-	TSC_hg19_v1_chr17_-_62833238 AK301174 AK304173	59069	-	TSC_hg19_v1_chr17_-_62833261 BC034693 BC041324	59090	-	CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC032382|LOC146880|146880|Rho GTPase activating protein 27 pseudogene##AK055342|LOC146880|146880|Rho GTPase activating protein 27 pseudogene##BC120976|LOC146880|146880|Rho GTPase activating protein 27 pseudogene##BC120977|LOC146880|146880|Rho GTPase activating protein 27 pseudogene##AK301174|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene##AK304173|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene##BC034693|PLEKHM1P|440456|pleckstrin homology domain containing, family M (with RUN domain) member 1 pseudogene	0.0	
chr18	5962971	5963069	reg1039909.p1	3.536	+	NM_001080209	-70918	-	TSC_hg19_v1_chr18_-_5630663 BC008377	-332373	-	AF069072 AB023204 NM_012307 TSC_hg19_v1_chr18_-_5543997 AK128531	-419032	-	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	451895	-	NM_001243517	548394	+	NM_001010000 BX648684 AK308259 AK302026	871445	+	NM_001080209|TMEM200C|645369|transmembrane protein 200C##BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AF069072|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AB023204|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_012307|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AK128531|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28	0.118618	
chr19	2096065	2096198	reg1026907.p1	3.536	+	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	-10888	-	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-44898	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-49890	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	134	-	TSC_hg19_v1_chr19_-_2096297 AL832474	163	-	TSC_hg19_v1_chr19_+_2096913 AY358444 NM_001031735 NM_001039846 DQ196309 DQ196310 AK301957 AY753639 BC014609 BC040964 BC010443	729	+	AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A##AY358444|IZUMO4|113177|IZUMO family member 4##NM_001031735|IZUMO4|113177|IZUMO family member 4##NM_001039846|IZUMO4|113177|IZUMO family member 4##DQ196309|IZUMO4|113177|IZUMO family member 4##DQ196310|IZUMO4|113177|IZUMO family member 4##AK301957|IZUMO4|113177|IZUMO family member 4##AY753639|IZUMO4|113177|IZUMO family member 4##BC014609|IZUMO4|113177|IZUMO family member 4##BC040964|IZUMO4|113177|IZUMO family member 4##BC010443|IZUMO4|113177|IZUMO family member 4	0.0	
chr3	112237978	112238158	reg1002951.p1	3.536	+	AK292692 NM_001085357 NM_181780	-19673	-	AL832529 AK129797 AK293399 BC031103 TSC_hg19_v1_chr3_+_112052024 AK074972	-186044	+	AK312563 NM_001004196 NM_005944 AK297194 BC022522 TSC_hg19_v1_chr3_+_112052002 AF063591	-186110	+	AK307432 AB079384 CU692886 DQ893424 DQ896774 AF202092 TSC_hg19_v1_chr3_-_112280499 BC024221 NM_022488 AL137515	42374	-	TSC_hg19_v1_chr3_-_112280761 BC002830	42693	-	TSC_hg19_v1_chr3_-_112280783 AK308919	42714	-	AK292692|BTLA|151888|B and T lymphocyte associated##NM_001085357|BTLA|151888|B and T lymphocyte associated##NM_181780|BTLA|151888|B and T lymphocyte associated##AL832529|CD200|4345|CD200 molecule##AK129797|CD200|4345|CD200 molecule##AK293399|CD200|4345|CD200 molecule##BC031103|CD200|4345|CD200 molecule##AK074972|CD200|4345|CD200 molecule##AK312563|CD200|4345|CD200 molecule##NM_001004196|CD200|4345|CD200 molecule##NM_005944|CD200|4345|CD200 molecule##AK297194|CD200|4345|CD200 molecule##BC022522|CD200|4345|CD200 molecule##AF063591|CD200|4345|CD200 molecule##AK307432|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AB079384|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##DQ893424|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##DQ896774|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AF202092|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##BC024221|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##NM_022488|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AL137515|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##BC002830|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)##AK308919|ATG3|64422|ATG3 autophagy related 3 homolog (S. cerevisiae)	0.0	
chr7	66206257	66206366	reg1033846.p1	3.536	+	TSC_hg19_v1_chr7_+_66205719 AJ250042 AK223329 AK290678	-581	+	TSC_hg19_v1_chr7_+_66205692 BC015330	-617	+	NM_014504 TSC_hg19_v1_chr7_+_66205645	-667	+	TSC_hg19_v1_chr7_+_66386215 AK222774 NM_017994 BC012562 AK000961 BC008675	179865	+	TSC_hg19_v1_chr7_+_66386228 BC041764	179920	+	TSC_hg19_v1_chr7_+_66386238 BC010519	179960	+	AJ250042|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK223329|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK290678|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##BC015330|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##NM_014504|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK222774|C7orf42|55069|chromosome 7 open reading frame 42##NM_017994|C7orf42|55069|chromosome 7 open reading frame 42##BC012562|C7orf42|55069|chromosome 7 open reading frame 42##AK000961|C7orf42|55069|chromosome 7 open reading frame 42##BC008675|C7orf42|55069|chromosome 7 open reading frame 42##BC041764|C7orf42|55069|chromosome 7 open reading frame 42##BC010519|C7orf42|55069|chromosome 7 open reading frame 42	0.132347	
chr8	75121451	75121526	reg1042919.p1	3.536	+	NM_001195797 NM_015364 BC020690 AF168121 AB590737 AB446498	-217868	+	NM_001040613 NM_017866 TSC_hg19_v1_chr8_+_74888429 BC002748	-233071	+	TSC_hg19_v1_chr8_-_74884503 BC093065 AL832244 NM_001204857 NM_001204858 NM_001204859 NM_001204860 NM_001204863 NM_001204864 NM_005648	-236977	-	BX537756 BC139832 BC098299 BC098314 BC099736 BC113856 BC114464 NM_020647 BC140875 BC140876	112040	-	TSC_hg19_v1_chr8_+_75262637 AB551556 AB551557 AB551558 NM_018972 BC024939 BC035450 NM_001040875 AK292572 AK295594 Y17849	141202	+	CR749657 NM_015886	615283	+	NM_001195797|LY96|23643|lymphocyte antigen 96##NM_015364|LY96|23643|lymphocyte antigen 96##BC020690|LY96|23643|lymphocyte antigen 96##AF168121|LY96|23643|lymphocyte antigen 96##AB446498|LY96|23643|lymphocyte antigen 96##NM_001040613|TMEM70|54968|transmembrane protein 70##NM_017866|TMEM70|54968|transmembrane protein 70##BC002748|TMEM70|54968|transmembrane protein 70##BC093065|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##AL832244|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204857|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204858|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204859|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204860|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204863|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_001204864|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##NM_005648|TCEB1|6921|transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)##BX537756|JPH1|56704|junctophilin 1##BC139832|JPH1|56704|junctophilin 1##BC098299|JPH1|56704|junctophilin 1##BC098314|JPH1|56704|junctophilin 1##BC099736|JPH1|56704|junctophilin 1##BC113856|JPH1|56704|junctophilin 1##BC114464|JPH1|56704|junctophilin 1##NM_020647|JPH1|56704|junctophilin 1##BC140875|JPH1|56704|junctophilin 1##BC140876|JPH1|56704|junctophilin 1##AB551556|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551557|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AB551558|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_018972|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC024939|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##BC035450|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##NM_001040875|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK292572|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##AK295594|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##Y17849|GDAP1|54332|ganglioside-induced differentiation-associated protein 1##CR749657|PI15|51050|peptidase inhibitor 15##NM_015886|PI15|51050|peptidase inhibitor 15	0.0	
chr10	75558556	75558622	reg1041105.p1	3.535	+	BC151206 TSC_hg19_v1_chr10_+_75545421	-13169	+	TSC_hg19_v1_chr10_+_75545371 AB020720 NM_001242487 NM_001242488 NM_015037 BC137249 BC137250	-13200	+	TSC_hg19_v1_chr10_+_75545339 AK091621 AX747098	-13269	+	BC035711 TSC_hg19_v1_chr10_-_75571357 BC052780	12785	-	TSC_hg19_v1_chr10_-_75571579 BC018681 AK303648 NM_003635	12976	-	AB590440 L07044 DQ892365 DQ895574 DQ896692 TSC_hg19_v1_chr10_-_75634275 U66064 AK131199 AK095576 BC034044 AK225771 AK291704 AK301180 NM_001204492 NM_001222 NM_172169 NM_172170 NM_172171 NM_172173	75730	-	BC151206|KIAA0913|23053|KIAA0913##AB020720|KIAA0913|23053|KIAA0913##NM_001242487|KIAA0913|23053|KIAA0913##NM_001242488|KIAA0913|23053|KIAA0913##NM_015037|KIAA0913|23053|KIAA0913##BC137249|KIAA0913|23053|KIAA0913##BC137250|KIAA0913|23053|KIAA0913##AK091621|KIAA0913|23053|KIAA0913##BC035711|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##BC018681|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##AK303648|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##NM_003635|NDST2|8509|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2##L07044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ892365|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ895574|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##DQ896692|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##U66064|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK131199|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK095576|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##BC034044|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK225771|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK291704|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##AK301180|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001204492|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_001222|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172169|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172170|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172171|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma##NM_172173|CAMK2G|818|calcium/calmodulin-dependent protein kinase II gamma	0.0	
chr11	16010669	16010788	reg1035170.p2	3.535	+	AB236158 NM_001042536	-874245	+	AB236159 NM_001031853	-876759	+	BC008428 AK291188 BC092468 NM_000728	-915602	+	AL136780 AK310506 BC047064 NM_001145819 NM_017508	413673	-	BC037866 NM_001145811	419699	-	AF309034 NM_033326	487197	-	AB236158|INSC|387755|inscuteable homolog (Drosophila)##NM_001042536|INSC|387755|inscuteable homolog (Drosophila)##AB236159|INSC|387755|inscuteable homolog (Drosophila)##NM_001031853|INSC|387755|inscuteable homolog (Drosophila)##BC008428|CALCB|797|calcitonin-related polypeptide beta##AK291188|CALCB|797|calcitonin-related polypeptide beta##BC092468|CALCB|797|calcitonin-related polypeptide beta##NM_000728|CALCB|797|calcitonin-related polypeptide beta##AL136780|SOX6|55553|SRY (sex determining region Y)-box 6##AK310506|SOX6|55553|SRY (sex determining region Y)-box 6##BC047064|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145819|SOX6|55553|SRY (sex determining region Y)-box 6##NM_017508|SOX6|55553|SRY (sex determining region Y)-box 6##BC037866|SOX6|55553|SRY (sex determining region Y)-box 6##NM_001145811|SOX6|55553|SRY (sex determining region Y)-box 6##AF309034|SOX6|55553|SRY (sex determining region Y)-box 6##NM_033326|SOX6|55553|SRY (sex determining region Y)-box 6	0.27951	CTCF.p2:-10:0.269
chr11	63044960	63045055	reg1042346.p1	3.535	+	AK127610 BC101315 BC101314 AY437532 BC101316 BC101317 NM_199352	-47947	-	BC034394 NM_001136506	-133315	-	AK307850 AK298341 AB042505 AK298351 AK313187 BC022387 NM_001184732 NM_001184733 NM_001184736 NM_004254	-261709	-	AK298430 AB075876 NM_001039752	12393	+	AK074246 BC022379 NM_080866 AB074812 AF440402 BC126288 AB062418 AJ295270 CU692590 HQ258285	92387	+	AK055392 AB298804 BC034222 AK302312 AJ416558 NM_001146728 NM_001146729 NM_054108	213537	-	AK127610|SLC22A25|387601|solute carrier family 22, member 25##BC101315|SLC22A25|387601|solute carrier family 22, member 25##BC101314|SLC22A25|387601|solute carrier family 22, member 25##AY437532|SLC22A25|387601|solute carrier family 22, member 25##BC101316|SLC22A25|387601|solute carrier family 22, member 25##BC101317|SLC22A25|387601|solute carrier family 22, member 25##NM_199352|SLC22A25|387601|solute carrier family 22, member 25##BC034394|SLC22A24|283238|solute carrier family 22, member 24##NM_001136506|SLC22A24|283238|solute carrier family 22, member 24##AK307850|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298341|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AB042505|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298351|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK313187|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##BC022387|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184732|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184733|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_001184736|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##NM_004254|SLC22A8|9376|solute carrier family 22 (organic anion transporter), member 8##AK298430|SLC22A10|387775|solute carrier family 22, member 10##AB075876|SLC22A10|387775|solute carrier family 22, member 10##NM_001039752|SLC22A10|387775|solute carrier family 22, member 10##AK074246|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##BC022379|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##NM_080866|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AB074812|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AF440402|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##BC126288|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AB062418|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AJ295270|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##HQ258285|SLC22A9|114571|solute carrier family 22 (organic anion transporter), member 9##AK055392|HRASLS5|117245|HRAS-like suppressor family, member 5##AB298804|HRASLS5|117245|HRAS-like suppressor family, member 5##BC034222|HRASLS5|117245|HRAS-like suppressor family, member 5##AK302312|HRASLS5|117245|HRAS-like suppressor family, member 5##AJ416558|HRASLS5|117245|HRAS-like suppressor family, member 5##NM_001146728|HRASLS5|117245|HRAS-like suppressor family, member 5##NM_001146729|HRASLS5|117245|HRAS-like suppressor family, member 5##NM_054108|HRASLS5|117245|HRAS-like suppressor family, member 5	0.125918	
chr1	212995735	212995824	reg1037176.p1	3.535	+	AK293129 NM_001042552 NM_001042553 NM_001146169 NM_001146170 NM_001146171 AK304557 TSC_hg19_v1_chr1_+_212965255 BC113638 BC117485 BC143956 BC143957 AL832248 BC048115 HQ258161	-30561	+	AB528354 CU675531 DQ892899 DQ896149 AK222996 AF201941 TSC_hg19_v1_chr1_-_212965111 BC007067 AK223260 AK303250 BC036048 AF255793 AK313730 NM_001042549 NM_015471	-30658	-	TSC_hg19_v1_chr1_-_212873317 AF255346 NM_018664	-122459	-	AY640234 BC035742 NM_001024601	25189	-	TSC_hg19_v1_chr1_-_213031441 AY030238 AY030239 AK092887	35685	-	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	35901	+	AK293129|TATDN3|128387|TatD DNase domain containing 3##NM_001042552|TATDN3|128387|TatD DNase domain containing 3##NM_001042553|TATDN3|128387|TatD DNase domain containing 3##NM_001146169|TATDN3|128387|TatD DNase domain containing 3##NM_001146170|TATDN3|128387|TatD DNase domain containing 3##NM_001146171|TATDN3|128387|TatD DNase domain containing 3##AK304557|TATDN3|128387|TatD DNase domain containing 3##BC113638|TATDN3|128387|TatD DNase domain containing 3##BC117485|TATDN3|128387|TatD DNase domain containing 3##BC143956|TATDN3|128387|TatD DNase domain containing 3##BC143957|TATDN3|128387|TatD DNase domain containing 3##AL832248|TATDN3|128387|TatD DNase domain containing 3##BC048115|TATDN3|128387|TatD DNase domain containing 3##HQ258161|TATDN3|128387|TatD DNase domain containing 3##DQ892899|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##DQ896149|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK222996|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF201941|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC007067|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK223260|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK303250|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC036048|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF255793|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK313730|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001042549|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_015471|NSL1|25936|NSL1, MIND kinetochore complex component, homolog (S. cerevisiae)##AF255346|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##NM_018664|BATF3|55509|basic leucine zipper transcription factor, ATF-like 3##AY640234|C1orf227|149643|chromosome 1 open reading frame 227##BC035742|C1orf227|149643|chromosome 1 open reading frame 227##NM_001024601|C1orf227|149643|chromosome 1 open reading frame 227##AY030238|FLVCR1-AS1|642946|FLVCR1 antisense RNA 1 (non-protein coding)##AY030239|FLVCR1-AS1|642946|FLVCR1 antisense RNA 1 (non-protein coding)##AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1	0.0	
chr1	242991753	242991819	reg1035264.p1	3.535	+	AK098092 NM_152666	-303789	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	-379016	-	BC132986 BC132988 AF276659 BC127722 NM_001004343	-829412	-	TSC_hg19_v1_chr1_-_243418369 AK296812 AK299552	426570	-	TSC_hg19_v1_chr1_-_243418566 AK310003 BC050722	426786	-	TSC_hg19_v1_chr1_-_243418675 NM_001042404 NM_001042405 NM_014812	426905	-	AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK296812|CEP170|9859|centrosomal protein 170kDa##AK299552|CEP170|9859|centrosomal protein 170kDa##AK310003|CEP170|9859|centrosomal protein 170kDa##BC050722|CEP170|9859|centrosomal protein 170kDa##NM_001042404|CEP170|9859|centrosomal protein 170kDa##NM_001042405|CEP170|9859|centrosomal protein 170kDa##NM_014812|CEP170|9859|centrosomal protein 170kDa	0.129622	
chr12	63034839	63034925	reg1039754.p1	3.535	+	BC136288 AK098456 NM_175895	-37672	-	AK022671 TSC_hg19_v1_chr12_+_62954346	-80571	+	BC042679 AB017814 AB384555 TSC_hg19_v1_chr12_+_62861012	-173967	+	TSC_hg19_v1_chr12_-_63328666 NM_020700 BC157843	293823	-	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	294043	-	AY322550 AB464459 AF030625 AF101725 BC074803 BC074804 L25615 S73899 TSC_hg19_v1_chr12_-_63544728	509789	-	BC136288|C12orf61|283416|chromosome 12 open reading frame 61##AK098456|C12orf61|283416|chromosome 12 open reading frame 61##NM_175895|C12orf61|283416|chromosome 12 open reading frame 61##AK022671|MON2|23041|MON2 homolog (S. cerevisiae)##AB017814|MON2|23041|MON2 homolog (S. cerevisiae)##NM_020700|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC157843|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AY322550|AVPR1A|552|arginine vasopressin receptor 1A##AF030625|AVPR1A|552|arginine vasopressin receptor 1A##AF101725|AVPR1A|552|arginine vasopressin receptor 1A##BC074803|AVPR1A|552|arginine vasopressin receptor 1A##BC074804|AVPR1A|552|arginine vasopressin receptor 1A##L25615|AVPR1A|552|arginine vasopressin receptor 1A##S73899|AVPR1A|552|arginine vasopressin receptor 1A	0.0	
chr19	2479376	2479454	reg1039578.p1	3.535	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-3177	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-22455	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-22479	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	223280	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	223327	-	AK124445 TSC_hg19_v1_chr19_-_2717420	237934	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr2	20408566	20408680	reg1035284.p2	3.535	+	NM_014713	-156835	-	TSC_hg19_v1_chr2_-_20251415 AY359028 D14696 BC003158 AK129875	-157196	-	CR456758 TSC_hg19_v1_chr2_-_20251382 BC000421 AK304433 BC093075	-157285	-	X60306 AB464260 CU679093 DQ893265 DQ896595 TSC_hg19_v1_chr2_-_20424892 AK299385 J05392 AK313974 AK222739 BC008765 AJ551176 AK311409 NM_002997	16164	-	TSC_hg19_v1_chr2_-_20425168 NM_001006946	16556	-	AF272350 TSC_hg19_v1_chr2_-_20512079	103426	-	NM_014713|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AY359028|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##D14696|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC003158|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK129875|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##CR456758|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC000421|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK304433|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC093075|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##X60306|SDC1|6382|syndecan 1##DQ893265|SDC1|6382|syndecan 1##DQ896595|SDC1|6382|syndecan 1##AK299385|SDC1|6382|syndecan 1##J05392|SDC1|6382|syndecan 1##AK313974|SDC1|6382|syndecan 1##AK222739|SDC1|6382|syndecan 1##BC008765|SDC1|6382|syndecan 1##AJ551176|SDC1|6382|syndecan 1##NM_002997|SDC1|6382|syndecan 1##NM_001006946|SDC1|6382|syndecan 1##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)	0.0	
chr2	219432753	219432891	reg1035390.p2	3.535	+	TSC_hg19_v1_chr2_+_219283845 NM_007127 AK223398 AK300965 AK313709	-148982	+	TSC_hg19_v1_chr2_+_219264739 BC012977 AB463546 EU446878 CU680458 AY279529	-168041	+	AF229162 NM_021198 NM_182642 TSC_hg19_v1_chr2_+_219264577	-168282	+	TSC_hg19_v1_chr2_-_219433075 BC133007 BC133009 BC144249 BC144252 AK095577 AK128583 BX538024 BC050461 BC112901 AL832645 NM_020935	231	-	AK293281 TSC_hg19_v1_chr2_+_219433334 AB500892	544	+	TSC_hg19_v1_chr2_+_219433559 BC137455 BC137456 AK316567 BC007102 NM_005444	775	+	NM_007127|VIL1|7429|villin 1##AK223398|VIL1|7429|villin 1##AK300965|VIL1|7429|villin 1##AK313709|VIL1|7429|villin 1##BC012977|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##EU446878|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##AY279529|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##AF229162|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##NM_021198|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##NM_182642|CTDSP1|58190|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1##BC133007|USP37|57695|ubiquitin specific peptidase 37##BC133009|USP37|57695|ubiquitin specific peptidase 37##BC144249|USP37|57695|ubiquitin specific peptidase 37##BC144252|USP37|57695|ubiquitin specific peptidase 37##AK095577|USP37|57695|ubiquitin specific peptidase 37##AK128583|USP37|57695|ubiquitin specific peptidase 37##BX538024|USP37|57695|ubiquitin specific peptidase 37##BC050461|USP37|57695|ubiquitin specific peptidase 37##BC112901|USP37|57695|ubiquitin specific peptidase 37##AL832645|USP37|57695|ubiquitin specific peptidase 37##NM_020935|USP37|57695|ubiquitin specific peptidase 37##AK293281|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##AB500892|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##BC137455|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##BC137456|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##AK316567|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##BC007102|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)##NM_005444|RQCD1|9125|RCD1 required for cell differentiation1 homolog (S. pombe)	0.0	
chr2	43710003	43710183	reg1030593.p2	3.535	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-256351	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-256363	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-256748	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	113055	-	TSC_hg19_v1_chr2_+_43864411 BC063310	154320	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	154346	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.012108	
chr2	73459800	73459980	reg1039603.p1	3.535	+	TSC_hg19_v1_chr2_+_73441372 NM_006062 AK300779 AK301809 BC073806 AB527925 U50383	-18485	+	AK295936 NM_001134462 AK316410	-30483	+	TSC_hg19_v1_chr2_-_73340101 AF334812 AB020664 NM_015470	-119781	-	TSC_hg19_v1_chr2_-_73460365 AY358605 BC005069 NM_032319 AK312077	474	-	NM_001009570 NM_001166284 NM_001166285 NM_006429 BC088351 TSC_hg19_v1_chr2_+_73461435 AK291961 AK293597 AK297846 AK298153 AK302078	1509	+	TSC_hg19_v1_chr2_+_73461445 AK098549 AK293175	1553	+	NM_006062|SMYD5|10322|SMYD family member 5##AK300779|SMYD5|10322|SMYD family member 5##AK301809|SMYD5|10322|SMYD family member 5##BC073806|SMYD5|10322|SMYD family member 5##U50383|SMYD5|10322|SMYD family member 5##AK295936|NOTO|344022|notochord homeobox##NM_001134462|NOTO|344022|notochord homeobox##AK316410|NOTO|344022|notochord homeobox##AF334812|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##AB020664|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##NM_015470|RAB11FIP5|26056|RAB11 family interacting protein 5 (class I)##AY358605|PRADC1|84279|protease-associated domain containing 1##BC005069|PRADC1|84279|protease-associated domain containing 1##NM_032319|PRADC1|84279|protease-associated domain containing 1##AK312077|PRADC1|84279|protease-associated domain containing 1##NM_001009570|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##NM_001166284|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##NM_001166285|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##NM_006429|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##BC088351|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK291961|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK293597|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK297846|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK298153|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK302078|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK098549|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##AK293175|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)	0.0	
chr5	119391696	119391806	reg1031778.p2	3.535	+	AF427126 AY692447 NM_001163991 NM_182761 BC040622 BC128242 BC128243	-426435	+	TSC_hg19_v1_chr5_+_118788215 NM_000414 NM_001199292 AK301212 AK312449 NM_001199291 BC003098 AK293254 AB208932 X87176 AK299685 AK298075 CU678374 DQ891866 DQ895055	-603555	+	TSC_hg19_v1_chr5_+_118691713 AF099935 AK001850 AF099936 CU675493	-700013	+	BC011941 TSC_hg19_v1_chr5_-_119740564	348799	-	TSC_hg19_v1_chr5_+_119799994 BC092474	408197	+	TSC_hg19_v1_chr5_+_119800010 AF242769 NM_016644	408260	+	AF427126|FAM170A|340069|family with sequence similarity 170, member A##AY692447|FAM170A|340069|family with sequence similarity 170, member A##NM_001163991|FAM170A|340069|family with sequence similarity 170, member A##NM_182761|FAM170A|340069|family with sequence similarity 170, member A##BC040622|FAM170A|340069|family with sequence similarity 170, member A##BC128242|FAM170A|340069|family with sequence similarity 170, member A##BC128243|FAM170A|340069|family with sequence similarity 170, member A##NM_000414|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199292|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK301212|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK312449|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199291|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC003098|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK293254|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##X87176|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK299685|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK298075|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ891866|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ895055|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AF099935|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001850|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099936|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC092474|PRR16|51334|proline rich 16##AF242769|PRR16|51334|proline rich 16##NM_016644|PRR16|51334|proline rich 16	0.041065	
chr5	64399222	64399308	reg1036300.p2	3.535	+	BX647971 TSC_hg19_v1_chr5_+_64064766 NM_005869 AK225161 AK225105 AK308223 AK312954 AY358569 AF039692 BC012117	-334481	+	TSC_hg19_v1_chr5_-_64064491 AK094073 AX748442 NM_173829	-334761	-	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	-334819	-	AY692424 NM_197941 AY692422	378459	-	TSC_hg19_v1_chr5_-_64858996 AF315941 BC005400 BC008504 NM_022145	459699	-	TSC_hg19_v1_chr5_+_64859122 AK025679 AK093675 AK300022 AK298175 AK301654 NM_015342 BC015385 AB384434 CU677289 GQ129262 GQ129263 D38552	459853	+	BX647971|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##NM_005869|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225161|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225105|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK308223|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK312954|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AY358569|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AF039692|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##BC012117|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK094073|SREK1IP1|285672|SREK1-interacting protein 1##NM_173829|SREK1IP1|285672|SREK1-interacting protein 1##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1##AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AF315941|CENPK|64105|centromere protein K##BC005400|CENPK|64105|centromere protein K##BC008504|CENPK|64105|centromere protein K##NM_022145|CENPK|64105|centromere protein K##AK025679|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK300022|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK298175|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK301654|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##NM_015342|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##BC015385|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129262|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129263|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##D38552|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1	0.773346	CTCF.p2:-56:0.773
chr6	41059875	41060055	reg1014455.p1	3.535	+	TSC_hg19_v1_chr6_+_41040930 BC039244	-19040	+	TSC_hg19_v1_chr6_+_41040723 X59711	-19243	+	TSC_hg19_v1_chr6_+_41040712 NM_002505 NM_021705	-19266	+	AF508193 AF534822 AF534823 BC100944 BC100945 BC100946 NM_178174 AY358357	62084	-	DQ891310 DQ894494 BC032362 BC018284 TSC_hg19_v1_chr6_-_41130855	70873	-	TSC_hg19_v1_chr6_-_41130901 AK312215 AF213457	70923	-	BC039244|NFYA|4800|nuclear transcription factor Y, alpha##X59711|NFYA|4800|nuclear transcription factor Y, alpha##NM_002505|NFYA|4800|nuclear transcription factor Y, alpha##NM_021705|NFYA|4800|nuclear transcription factor Y, alpha##AF508193|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##AF534822|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##AF534823|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##BC100944|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##BC100945|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##BC100946|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##NM_178174|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##AY358357|TREML1|340205|triggering receptor expressed on myeloid cells-like 1##DQ891310|TREM2|54209|triggering receptor expressed on myeloid cells 2##DQ894494|TREM2|54209|triggering receptor expressed on myeloid cells 2##BC032362|TREM2|54209|triggering receptor expressed on myeloid cells 2##BC018284|TREM2|54209|triggering receptor expressed on myeloid cells 2##AK312215|TREM2|54209|triggering receptor expressed on myeloid cells 2##AF213457|TREM2|54209|triggering receptor expressed on myeloid cells 2	0.0	
chr6	88441610	88441790	reg1035520.p1	3.535	+	AK001204 NM_018064 TSC_hg19_v1_chr6_-_88411988	-29712	-	TSC_hg19_v1_chr6_-_88411949 AK222701	-29752	-	TSC_hg19_v1_chr6_-_88411885 BC000764 BC003042	-29791	-	BC029488 NM_030960 AF203447	315830	+	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	413336	-	NM_001160226 NM_001160258 NM_001160259 NM_016083	434066	-	AK001204|AKIRIN2|55122|akirin 2##NM_018064|AKIRIN2|55122|akirin 2##AK222701|AKIRIN2|55122|akirin 2##BC000764|AKIRIN2|55122|akirin 2##BC003042|AKIRIN2|55122|akirin 2##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)	0.0	
chr6	89298838	89298951	reg1041422.p1	3.535	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-423128	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-443858	-	BC029488 NM_030960 AF203447	-541364	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	374297	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	374414	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	374453	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.0	
chr7	62333384	62333480	reg1041550.p1	3.535	+	AK131575 NM_001159279	-4823550	+	AF277624 NM_033273	-5125862	-	Y10275 TSC_hg19_v1_chr7_-_56184079 BC043523 NM_001145712	-6149389	-	NM_001159522	1172388	+	NM_001159524	1334148	+	BC033523 NM_153363	1355419	+	AK131575|ZNF716|441234|zinc finger protein 716##NM_001159279|ZNF716|441234|zinc finger protein 716##AF277624|ZNF479|90827|zinc finger protein 479##NM_033273|ZNF479|90827|zinc finger protein 479##BC043523|LOC389493|389493|uncharacterized protein LOC389493##NM_001145712|LOC389493|389493|uncharacterized protein LOC389493##NM_001159522|ZNF727|442319|zinc finger protein 727##NM_001159524|ZNF735|730291|zinc finger protein 735##BC033523|ZNF679|168417|zinc finger protein 679##NM_153363|ZNF679|168417|zinc finger protein 679	0.0	
chr7	66119422	66119568	reg1026659.p2	3.535	+	BC042482 TSC_hg19_v1_chr7_+_66093944 AK056631 AK127790	-25553	+	TSC_hg19_v1_chr7_+_66093867 NM_001167961 NM_153033	-25621	+	TSC_hg19_v1_chr7_-_66057374 BC080520 BC057835 BC067867 AK310548 BC103766 AK310370 AK296922	-62134	-	TSC_hg19_v1_chr7_+_66147121 AK056864	27645	+	NM_014504 TSC_hg19_v1_chr7_+_66205645	86149	+	TSC_hg19_v1_chr7_+_66205692 BC015330	86199	+	BC042482|KCTD7|154881|potassium channel tetramerisation domain containing 7##AK056631|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_001167961|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_153033|KCTD7|154881|potassium channel tetramerisation domain containing 7##AK310548|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##BC103766|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK310370|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK296922|LOC493754|493754|RAB guanine nucleotide exchange factor (GEF) 1 pseudogene##AK056864|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##NM_014504|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##BC015330|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1	0.0	
chr11	121335423	121335538	reg1033268.p1	3.534	+	TSC_hg19_v1_chr11_+_121323112 AK309523	-12305	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	-12531	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	-171926	+	TSC_hg19_v1_chr11_+_121461071 AK294404	125618	+	BC130361 BC130363 AF303179 NM_001001786	651381	-	TSC_hg19_v1_chr11_+_122526429 NM_032873 AK075203 BC007541 AK222843 AK222846 AB075839 CU675695	1191067	+	AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC130361|BLID|414899|BH3-like motif containing, cell death inducer##BC130363|BLID|414899|BH3-like motif containing, cell death inducer##AF303179|BLID|414899|BH3-like motif containing, cell death inducer##NM_001001786|BLID|414899|BH3-like motif containing, cell death inducer##NM_032873|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK075203|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##BC007541|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222843|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AK222846|UBASH3B|84959|ubiquitin associated and SH3 domain containing B##AB075839|UBASH3B|84959|ubiquitin associated and SH3 domain containing B	0.010002	
chr14	55031999	55032081	reg1008680.p5	3.534	+	AK315318 AK289478 TSC_hg19_v1_chr14_+_54976623 NM_006568 BC015063 U66469 CU677207 EU832831 GQ129438	-55429	+	TSC_hg19_v1_chr14_-_54955728 AB001106 BX647679 NM_004124	-76285	-	TSC_hg19_v1_chr14_-_54955693 M86492 AB209240 AK311753 BC005359	-76355	-	NM_001161576 NM_015589 BC057838 TSC_hg19_v1_chr14_+_55034359	2304	+	CU691270 TSC_hg19_v1_chr14_+_55034639 AK024652 BC121173 BC121174	2596	+	TSC_hg19_v1_chr14_+_55168831 AB028976	136849	+	AK315318|CGRRF1|10668|cell growth regulator with ring finger domain 1##AK289478|CGRRF1|10668|cell growth regulator with ring finger domain 1##NM_006568|CGRRF1|10668|cell growth regulator with ring finger domain 1##BC015063|CGRRF1|10668|cell growth regulator with ring finger domain 1##U66469|CGRRF1|10668|cell growth regulator with ring finger domain 1##EU832831|CGRRF1|10668|cell growth regulator with ring finger domain 1##GQ129438|CGRRF1|10668|cell growth regulator with ring finger domain 1##AB001106|GMFB|2764|glia maturation factor, beta##BX647679|GMFB|2764|glia maturation factor, beta##NM_004124|GMFB|2764|glia maturation factor, beta##M86492|GMFB|2764|glia maturation factor, beta##AB209240|GMFB|2764|glia maturation factor, beta##AK311753|GMFB|2764|glia maturation factor, beta##BC005359|GMFB|2764|glia maturation factor, beta##NM_001161576|SAMD4A|23034|sterile alpha motif domain containing 4A##NM_015589|SAMD4A|23034|sterile alpha motif domain containing 4A##BC057838|SAMD4A|23034|sterile alpha motif domain containing 4A##AK024652|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121173|SAMD4A|23034|sterile alpha motif domain containing 4A##BC121174|SAMD4A|23034|sterile alpha motif domain containing 4A##AB028976|SAMD4A|23034|sterile alpha motif domain containing 4A	0.0	
chr1	55233904	55234005	reg1040294.p1	3.534	+	BC007956 AK289679 TSC_hg19_v1_chr1_-_55230197 BC011758 NM_152268	-3762	-	AK025524 NM_004623 TSC_hg19_v1_chr1_+_55181537 AF063602 AK292426 AK090964 AX746706 AK222562 AF073887 BC001276 BT006817 CU674642	-52417	+	NM_001039464 BC028620 CR749830 AK302446 AK302703 BX648088 AK093272 AX748025 BC144516 AK301894	-126501	+	AK000626 NM_001114108 NM_017904	32951	-	AK097520 NM_001110533 NM_152607 BC039109 BC064142	37800	+	TSC_hg19_v1_chr1_-_55331351 AK298414	97397	-	BC007956|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##AK289679|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##BC011758|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##NM_152268|PARS2|25973|prolyl-tRNA synthetase 2, mitochondrial (putative)##AK025524|TTC4|7268|tetratricopeptide repeat domain 4##NM_004623|TTC4|7268|tetratricopeptide repeat domain 4##AF063602|TTC4|7268|tetratricopeptide repeat domain 4##AK292426|TTC4|7268|tetratricopeptide repeat domain 4##AK090964|TTC4|7268|tetratricopeptide repeat domain 4##AK222562|TTC4|7268|tetratricopeptide repeat domain 4##AF073887|TTC4|7268|tetratricopeptide repeat domain 4##BC001276|TTC4|7268|tetratricopeptide repeat domain 4##BT006817|TTC4|7268|tetratricopeptide repeat domain 4##NM_001039464|HEATR8|374977|HEAT repeat containing 8##BC028620|HEATR8-TTC4|100527960|HEATR8-TTC4 readthrough##CR749830|HEATR8-TTC4|100527960|HEATR8-TTC4 readthrough##AK302446|HEATR8|374977|HEAT repeat containing 8##AK302703|HEATR8|374977|HEAT repeat containing 8##BX648088|HEATR8-TTC4|100527960|HEATR8-TTC4 readthrough##AK093272|HEATR8|374977|HEAT repeat containing 8##BC144516|HEATR8|374977|HEAT repeat containing 8##AK301894|HEATR8|374977|HEAT repeat containing 8##AK000626|TTC22|55001|tetratricopeptide repeat domain 22##NM_001114108|TTC22|55001|tetratricopeptide repeat domain 22##NM_017904|TTC22|55001|tetratricopeptide repeat domain 22##AK097520|C1orf177|163747|chromosome 1 open reading frame 177##NM_001110533|C1orf177|163747|chromosome 1 open reading frame 177##NM_152607|C1orf177|163747|chromosome 1 open reading frame 177##BC039109|C1orf177|163747|chromosome 1 open reading frame 177##BC064142|C1orf177|163747|chromosome 1 open reading frame 177##AK298414|DHCR24|1718|24-dehydrocholesterol reductase	0.033339	
chr16	11348365	11348483	reg1011294.p3	3.534	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-309981	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-312189	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-312258	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	1626	-	X63758 BC096135 BC096136 BC096137 NM_005425	14714	-	NM_021247	19027	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.170634	
chr17	55683003	55683103	reg1032860.p2	3.534	+	AK093888 AX748353 NM_170721	-348680	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-349080	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-519910	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	244351	-	AK000746 NM_017949	297696	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	349623	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.0	
chr2	197201612	197201792	reg1020613.p1	3.534	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-165384	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-165423	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-268207	-	BC117194 BC117198 AB037722 NM_020760	255590	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	302655	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	462711	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.0	
chr4	59642120	59642273	reg1030079.p1	3.534	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-1665628	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-1665664	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-1665797	-	TSC_hg19_v1_chr4_+_62066948 AK309793	2424779	+	NM_015236	2720642	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	5632900	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.0	
chr5	37758410	37758519	reg1040861.p1	3.534	+	TSC_hg19_v1_chr5_+_37379419 AL512685 BC009648 NM_018034 BC025315 AK001095	-379034	+	TSC_hg19_v1_chr5_+_37379386 AK310901 AK291179 BX537655	-379079	+	TSC_hg19_v1_chr5_-_37371206 AK297143	-387250	-	AJ001899 NM_199231	77128	-	AJ001897 AJ001898 NM_001190468 NM_001190469	77464	-	AF053748 NM_000514	81317	-	AL512685|WDR70|55100|WD repeat domain 70##BC009648|WDR70|55100|WD repeat domain 70##NM_018034|WDR70|55100|WD repeat domain 70##BC025315|WDR70|55100|WD repeat domain 70##AK001095|WDR70|55100|WD repeat domain 70##AK310901|WDR70|55100|WD repeat domain 70##AK291179|WDR70|55100|WD repeat domain 70##BX537655|WDR70|55100|WD repeat domain 70##AK297143|NUP155|9631|nucleoporin 155kDa##AJ001899|GDNF|2668|glial cell derived neurotrophic factor##NM_199231|GDNF|2668|glial cell derived neurotrophic factor##AJ001897|GDNF|2668|glial cell derived neurotrophic factor##AJ001898|GDNF|2668|glial cell derived neurotrophic factor##NM_001190468|GDNF|2668|glial cell derived neurotrophic factor##NM_001190469|GDNF|2668|glial cell derived neurotrophic factor##AF053748|GDNF|2668|glial cell derived neurotrophic factor##NM_000514|GDNF|2668|glial cell derived neurotrophic factor	0.0	
chr7	122172822	122172955	reg1032072.p1	3.534	+	AY726588 BC127714 BC127715 NM_001024613 NM_001160264 BC136684 BC144367 AK300742	-228299	-	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	-388599	-	TSC_hg19_v1_chr7_+_121513214 U88967	-659667	+	BC022038 AF447589 NM_139175 AK098524	166309	-	AK058116 AK098654 BC029264 NM_198085	170104	-	AY264289 TSC_hg19_v1_chr7_-_122526515 AF401638 BC054339 BC136601 BC144278 BC144279 AK098170 AK126518	353610	-	AY726588|FEZF1|389549|FEZ family zinc finger 1##BC127714|FEZF1|389549|FEZ family zinc finger 1##BC127715|FEZF1|389549|FEZ family zinc finger 1##NM_001024613|FEZF1|389549|FEZ family zinc finger 1##NM_001160264|FEZF1|389549|FEZ family zinc finger 1##BC136684|FEZF1|389549|FEZ family zinc finger 1##BC144367|FEZF1|389549|FEZ family zinc finger 1##AK300742|FEZF1|389549|FEZ family zinc finger 1##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase##U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##BC022038|RNF133|168433|ring finger protein 133##AF447589|RNF133|168433|ring finger protein 133##NM_139175|RNF133|168433|ring finger protein 133##AK098524|RNF133|168433|ring finger protein 133##AK058116|RNF148|378925|ring finger protein 148##AK098654|RNF148|378925|ring finger protein 148##BC029264|RNF148|378925|ring finger protein 148##NM_198085|RNF148|378925|ring finger protein 148##AY264289|CADPS2|93664|Ca++-dependent secretion activator 2##AF401638|CADPS2|93664|Ca++-dependent secretion activator 2##BC054339|CADPS2|93664|Ca++-dependent secretion activator 2##BC136601|CADPS2|93664|Ca++-dependent secretion activator 2##BC144278|CADPS2|93664|Ca++-dependent secretion activator 2##BC144279|CADPS2|93664|Ca++-dependent secretion activator 2##AK126518|CADPS2|93664|Ca++-dependent secretion activator 2	0.977703	CTCF.p2:35:0.978
chr8	71005686	71005802	reg1037165.p1	3.534	+	TSC_hg19_v1_chr8_-_70983549 AF319458 AK022595 NM_024504	-22189	-	TSC_hg19_v1_chr8_-_70983468 BC052311	-22273	-	AK308488 AF205075 AK096879 NM_030958	-258495	-	BC092442 TSC_hg19_v1_chr8_-_71315599	309803	-	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	310282	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	514778	-	AF319458|PRDM14|63978|PR domain containing 14##AK022595|PRDM14|63978|PR domain containing 14##NM_024504|PRDM14|63978|PR domain containing 14##BC052311|PRDM14|63978|PR domain containing 14##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC092442|NCOA2|10499|nuclear receptor coactivator 2##NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1	0.08358	
chrX	35399353	35399533	reg1008191.p2	3.534	+	BC035026 NM_152631 AK093101 AX747923 CU690032	-438514	+	TSC_hg19_v1_chrX_-_34675406 BC039242 NM_031442	-724035	-	BC026171 AK292354 NM_203408	-1249007	-	NM_001099921	417015	+	NM_152632 AK126295 BC027936 CU693328	538439	+	AK093920 AX748365 NM_173695	665609	+	BC035026|FAM47B|170062|family with sequence similarity 47, member B##NM_152631|FAM47B|170062|family with sequence similarity 47, member B##AK093101|FAM47B|170062|family with sequence similarity 47, member B##BC039242|TMEM47|83604|transmembrane protein 47##NM_031442|TMEM47|83604|transmembrane protein 47##BC026171|FAM47A|158724|family with sequence similarity 47, member A##AK292354|FAM47A|158724|family with sequence similarity 47, member A##NM_203408|FAM47A|158724|family with sequence similarity 47, member A##NM_001099921|MAGEB16|139604|melanoma antigen family B, 16##NM_152632|CXorf22|170063|chromosome X open reading frame 22##AK126295|CXorf22|170063|chromosome X open reading frame 22##BC027936|CXorf22|170063|chromosome X open reading frame 22##AK093920|CXorf59|286464|chromosome X open reading frame 59##NM_173695|CXorf59|286464|chromosome X open reading frame 59	0.0	
chr10	6443188	6443368	reg1000466.p1	3.533	+	NM_004566 TSC_hg19_v1_chr10_+_6244894 L77662 AK291263 BC040482 AF056320	-198402	+	TSC_hg19_v1_chr10_+_6186913 AK303039 BC037258	-256366	+	TSC_hg19_v1_chr10_+_6186890 AK131307	-256394	+	AK293935 AK312411 AK308099 NM_001242413 NM_006257 L01087 TSC_hg19_v1_chr10_-_6622303	178983	-	TSC_hg19_v1_chr10_+_6622460 AY007155	179202	+	TSC_hg19_v1_chr10_-_7451209 AB046837 BC152430 NM_001018039	1007972	-	NM_004566|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##L77662|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK291263|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC040482|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AF056320|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK303039|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##BC037258|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK131307|PFKFB3|5209|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3##AK293935|PRKCQ|5588|protein kinase C, theta##AK312411|PRKCQ|5588|protein kinase C, theta##AK308099|PRKCQ|5588|protein kinase C, theta##NM_001242413|PRKCQ|5588|protein kinase C, theta##NM_006257|PRKCQ|5588|protein kinase C, theta##L01087|PRKCQ|5588|protein kinase C, theta##AY007155|LOC439949|439949|uncharacterized LOC439949##AB046837|SFMBT2|57713|Scm-like with four mbt domains 2##BC152430|SFMBT2|57713|Scm-like with four mbt domains 2##NM_001018039|SFMBT2|57713|Scm-like with four mbt domains 2	0.0	
chr11	32583529	32583639	reg1035345.p1	3.533	+	TSC_hg19_v1_chr11_-_32457072 X51630 AK291736 NM_000378 NM_024424 NM_024426	-126515	-	TSC_hg19_v1_chr11_-_32456950 BC046461	-126645	-	AK093168 BC032861 NM_001198551 NM_001198552	-131224	-	TSC_hg19_v1_chr11_+_32605343 AK312512	21756	+	TSC_hg19_v1_chr11_+_32605376 AK131064 AK292139 AK304378 AK001768 AK300002 AF064603 BC051292 BC011937 BC019103 NM_006360 AK222564 AK307121 CU676384 AY769947 CR450300 DQ185042	21814	+	BC146800 AK131470 NM_001008391 BC062749	232593	-	X51630|WT1|7490|Wilms tumor 1##AK291736|WT1|7490|Wilms tumor 1##NM_000378|WT1|7490|Wilms tumor 1##NM_024424|WT1|7490|Wilms tumor 1##NM_024426|WT1|7490|Wilms tumor 1##BC046461|WT1|7490|Wilms tumor 1##AK093168|WT1|7490|Wilms tumor 1##BC032861|WT1|7490|Wilms tumor 1##NM_001198551|WT1|7490|Wilms tumor 1##NM_001198552|WT1|7490|Wilms tumor 1##AK312512|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK131064|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK292139|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK304378|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK001768|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK300002|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AF064603|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC051292|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC011937|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC019103|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##NM_006360|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK222564|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AK307121|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##AY769947|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##CR450300|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##DQ185042|EIF3M|10480|eukaryotic translation initiation factor 3, subunit M##BC146800|CCDC73|493860|coiled-coil domain containing 73##AK131470|CCDC73|493860|coiled-coil domain containing 73##NM_001008391|CCDC73|493860|coiled-coil domain containing 73##BC062749|CCDC73|493860|coiled-coil domain containing 73	0.357475	CTCF.p2:22:0.357
chr12	70132434	70132527	reg1033318.p2	3.533	+	BC151138 TSC_hg19_v1_chr12_-_70093084 BC006440 AF440758 AK096459 NM_032735	-39351	-	NM_152439 BC028087	-49425	-	BC090881 NM_201550	-127539	-	TSC_hg19_v1_chr12_+_70132676 AK314547 NM_022456 NM_175624 AJ312896 AJ312898 AJ312900 AK026201 AK225441 BC014553 BC059358	159	+	NM_175623 NM_175625 AJ312897 AJ312899 AJ312901	703	+	AK027671 BC015548 NM_001024647 AK027566	40304	+	BC151138|BEST3|144453|bestrophin 3##BC006440|BEST3|144453|bestrophin 3##AF440758|BEST3|144453|bestrophin 3##AK096459|BEST3|144453|bestrophin 3##NM_032735|BEST3|144453|bestrophin 3##NM_152439|BEST3|144453|bestrophin 3##BC028087|BEST3|144453|bestrophin 3##BC090881|LRRC10|376132|leucine rich repeat containing 10##NM_201550|LRRC10|376132|leucine rich repeat containing 10##AK314547|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_022456|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_175624|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312896|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312898|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312900|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK026201|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK225441|RAB3IP|117177|RAB3A interacting protein (rabin3)##BC014553|RAB3IP|117177|RAB3A interacting protein (rabin3)##BC059358|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_175623|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_175625|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312897|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312899|RAB3IP|117177|RAB3A interacting protein (rabin3)##AJ312901|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK027671|RAB3IP|117177|RAB3A interacting protein (rabin3)##BC015548|RAB3IP|117177|RAB3A interacting protein (rabin3)##NM_001024647|RAB3IP|117177|RAB3A interacting protein (rabin3)##AK027566|RAB3IP|117177|RAB3A interacting protein (rabin3)	0.150167	
chr13	27744915	27744981	reg1044916.p2	3.533	+	AK312602 AK294378 AK311107 AK307756 AK290220 NM_005288 TSC_hg19_v1_chr13_-_27334929	-410095	-	TSC_hg19_v1_chr13_+_27131892 AF454702	-613046	+	TSC_hg19_v1_chr13_+_27131854 AK289845 BC050283 NM_006646	-613114	+	DQ894074 AF022789 TSC_hg19_v1_chr13_-_27745948 AK289685	913	-	TSC_hg19_v1_chr13_-_27746003 BC026072 NM_182488	1138	-	TSC_hg19_v1_chr13_+_27825693 D28406 NM_000982 AK130968 AK311795 BC070185 BC070323 BC070330 BC104667 BX647669 AY320407 U25789 BC104478 L25348 U14967 BC070184 BC001603	80794	+	AK312602|GPR12|2835|G protein-coupled receptor 12##AK294378|GPR12|2835|G protein-coupled receptor 12##AK311107|GPR12|2835|G protein-coupled receptor 12##AK307756|GPR12|2835|G protein-coupled receptor 12##AK290220|GPR12|2835|G protein-coupled receptor 12##NM_005288|GPR12|2835|G protein-coupled receptor 12##AF454702|WASF3|10810|WAS protein family, member 3##AK289845|WASF3|10810|WAS protein family, member 3##BC050283|WASF3|10810|WAS protein family, member 3##NM_006646|WASF3|10810|WAS protein family, member 3##DQ894074|USP12|219333|ubiquitin specific peptidase 12##AF022789|USP12|219333|ubiquitin specific peptidase 12##AK289685|USP12|219333|ubiquitin specific peptidase 12##BC026072|USP12|219333|ubiquitin specific peptidase 12##NM_182488|USP12|219333|ubiquitin specific peptidase 12##D28406|RPL21|6144|ribosomal protein L21##NM_000982|RPL21|6144|ribosomal protein L21##AK130968|RPL21|6144|ribosomal protein L21##AK311795|RPL21|6144|ribosomal protein L21##BC070185|RPL21|6144|ribosomal protein L21##BC070323|RPL21|6144|ribosomal protein L21##BC070330|RPL21|6144|ribosomal protein L21##BC104667|RPL21|6144|ribosomal protein L21##BX647669|RPL21|6144|ribosomal protein L21##U25789|RPL21|6144|ribosomal protein L21##BC104478|RPL21|6144|ribosomal protein L21##U14967|RPL21|6144|ribosomal protein L21##BC070184|RPL21|6144|ribosomal protein L21##BC001603|RPL21|6144|ribosomal protein L21	0.0	
chr16	22673514	22673594	reg1040017.p1	3.533	+	NM_001135865 BC036263 AK296338 CU690320	-148572	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	-287759	-	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	-364806	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	151948	+	AB209794 AF105374 AF105375 NM_006043 BC093734 BC093736	152297	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	486995	-	NM_001135865|LOC100132247|100132247|nuclear pore complex interacting protein related gene##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296338|LOC100132247|100132247|nuclear pore complex interacting protein related gene##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AB209794|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105374|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105375|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_006043|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093734|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093736|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31	0.0	
chr18	74204466	74204559	reg1039483.p1	3.533	+	BC108287 TSC_hg19_v1_chr18_-_74092260	-112262	-	BC105945 BC107486 NM_001037331 BC037871 AK093452 AX748136	-1064890	-	TSC_hg19_v1_chr18_+_72998258 AK223545 BC024152	-1206170	+	D86975 NM_014643 TSC_hg19_v1_chr18_-_74207166	2643	-	TSC_hg19_v1_chr18_-_74534239 BC032908	329727	-	TSC_hg19_v1_chr18_+_74534512 BX648028	329998	+	BC108287|ZNF516|9658|zinc finger protein 516##BC105945|C18orf62|284274|chromosome 18 open reading frame 62##BC107486|C18orf62|284274|chromosome 18 open reading frame 62##NM_001037331|C18orf62|284274|chromosome 18 open reading frame 62##BC037871|C18orf62|284274|chromosome 18 open reading frame 62##AK093452|C18orf62|284274|chromosome 18 open reading frame 62##AK223545|TSHZ1|10194|teashirt zinc finger homeobox 1##BC024152|TSHZ1|10194|teashirt zinc finger homeobox 1##D86975|ZNF516|9658|zinc finger protein 516##NM_014643|ZNF516|9658|zinc finger protein 516##BC032908|LOC100131655|100131655|uncharacterized LOC100131655##BX648028|ZNF236|7776|zinc finger protein 236	0.0	
chr20	46356353	46356481	reg1040916.p2	3.533	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-225733	+	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	-225795	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-370929	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	58335	-	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	58901	-	AB037836 TSC_hg19_v1_chr20_-_47444291	1087869	-	AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1	0.0	
chr2	227664630	227664713	reg1030586.p2	3.533	+	TSC_hg19_v1_chr2_-_227664534 S62539	-172	-	EU831611 EU831698 TSC_hg19_v1_chr2_-_227663490 BC053895 NM_005544	-1192	-	NM_020864 BC131727 AB040919	-1399026	+	NM_001167608 NM_032276 TSC_hg19_v1_chr2_+_227700769 BC030293 AX775823 BC111056 AK074258 AX775825	36059	+	TSC_hg19_v1_chr2_-_228028922 X81053	364231	-	NM_000092	364603	-	S62539|IRS1|3667|insulin receptor substrate 1##EU831611|IRS1|3667|insulin receptor substrate 1##EU831698|IRS1|3667|insulin receptor substrate 1##BC053895|IRS1|3667|insulin receptor substrate 1##NM_005544|IRS1|3667|insulin receptor substrate 1##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##NM_001167608|RHBDD1|84236|rhomboid domain containing 1##NM_032276|RHBDD1|84236|rhomboid domain containing 1##BC111056|RHBDD1|84236|rhomboid domain containing 1##AK074258|RHBDD1|84236|rhomboid domain containing 1##X81053|COL4A4|1286|collagen, type IV, alpha 4##NM_000092|COL4A4|1286|collagen, type IV, alpha 4	0.0	
chr2	98475040	98475219	reg1043364.p2	3.533	+	AK025852 TSC_hg19_v1_chr2_-_98408976	-66207	-	AB083211 NM_207519	-124261	+	L05148 NM_001079 AK303341 AK310637 AK310628 BC053878	-145087	+	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	137057	-	TSC_hg19_v1_chr2_-_98612395 AK098792	137274	-	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	228517	+	AK025852|TMEM131|23505|transmembrane protein 131##AB083211|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_207519|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##L05148|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_001079|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK303341|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310637|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310628|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##BC053878|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##AK098792|TMEM131|23505|transmembrane protein 131##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B	0.0	
chr3	10206925	10207105	reg1019857.p4	3.533	+	NM_001570 BC125184 AK299033 AK312841 TSC_hg19_v1_chr3_+_10206602 AF026273 AB587544 AJ496794	-415	+	TSC_hg19_v1_chr3_+_10183517 AB528056	-23477	+	AK304002 TSC_hg19_v1_chr3_+_10183487	-23517	+	TSC_hg19_v1_chr3_+_10290182 NM_014760	83160	+	TSC_hg19_v1_chr3_+_10290210 D86972	83247	+	TSC_hg19_v1_chr3_+_10290370 AK289794 BC090935 BC101776 BC101770	83507	+	NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2##BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK304002|VHL|7428|von Hippel-Lindau tumor suppressor##NM_014760|TATDN2|9797|TatD DNase domain containing 2##D86972|TATDN2|9797|TatD DNase domain containing 2##AK289794|TATDN2|9797|TatD DNase domain containing 2##BC090935|TATDN2|9797|TatD DNase domain containing 2##BC101776|TATDN2|9797|TatD DNase domain containing 2##BC101770|TATDN2|9797|TatD DNase domain containing 2	0.019176	
chr3	180707767	180707898	reg1040845.p2	3.533	+	NM_001190233 TSC_hg19_v1_chr3_-_180707525 AK311765 BC073989 BC009702 AK309019 AK307097 NM_145261	-399	-	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	-77354	+	TSC_hg19_v1_chr3_+_180630246 NM_001013438 NM_001013439 NM_005087	-77649	+	BC016393 TSC_hg19_v1_chr3_+_181417398 AL157425	709560	+	NM_003106 TSC_hg19_v1_chr3_+_181429713 AK312595	721881	+	BC013923 L07335 Z31560 AB464715 EU446654 TSC_hg19_v1_chr3_+_181430202	722306	+	NM_001190233|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK311765|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC073989|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC009702|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK307097|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##NM_145261|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013438|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013439|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_005087|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC016393|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##AL157425|SOX2-OT|347689|SOX2 overlapping transcript (non-protein coding)##NM_003106|SOX2|6657|SRY (sex determining region Y)-box 2##BC013923|SOX2|6657|SRY (sex determining region Y)-box 2##L07335|SOX2|6657|SRY (sex determining region Y)-box 2##Z31560|SOX2|6657|SRY (sex determining region Y)-box 2##EU446654|SOX2|6657|SRY (sex determining region Y)-box 2	0.0	
chr4	129980622	129980689	reg1037091.p2	3.533	+	TSC_hg19_v1_chr4_+_129732427 BC032376	-248202	+	TSC_hg19_v1_chr4_+_129730875 NM_024900 NM_199320 AK027620 AF520952 AK304815 AK127326	-249785	+	AK131272 NM_006320	-770672	-	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	33935	-	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	34212	+	NM_001099783	36626	+	BC032376|PHF17|79960|PHD finger protein 17##NM_024900|PHF17|79960|PHD finger protein 17##NM_199320|PHF17|79960|PHD finger protein 17##AK027620|PHF17|79960|PHD finger protein 17##AF520952|PHF17|79960|PHD finger protein 17##AK304815|PHF17|79960|PHD finger protein 17##AK127326|PHF17|79960|PHD finger protein 17##AK131272|PGRMC2|10424|progesterone receptor membrane component 2##NM_006320|PGRMC2|10424|progesterone receptor membrane component 2##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33	0.0	
chr5	99870884	99870974	reg1032564.p1	3.533	+	BC054860 BC117134 NM_001270 AF006513	-1608701	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-1765888	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-3351942	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	144	+	AF529367 TSC_hg19_v1_chr5_+_99871306	341	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	367999	-	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.0	
chr7	128579283	128579437	reg1043881.p1	3.533	+	DQ995493 AY693669 BC004139 BC004201 DQ277633 NM_032643	-1102	+	AK293654 AY693665 AY693668 NM_001098629 NM_001098630 NM_001242452 DQ995492 U51127 AK297083 AY504947 AY693666 AY693667 EU258896	-1324	+	TSC_hg19_v1_chr7_-_128550763 AK122706 NM_001135914 NM_199349	-28594	-	EU258898 NM_001098627 DQ995494 AY504946 DQ277634	1448	+	AJ133769 AF145029 TSC_hg19_v1_chr7_-_128694965 AK312580 BC068530	115535	-	TSC_hg19_v1_chr7_-_128695168 BC009923	115788	-	AY693669|IRF5|3663|interferon regulatory factor 5##BC004139|IRF5|3663|interferon regulatory factor 5##BC004201|IRF5|3663|interferon regulatory factor 5##DQ277633|IRF5|3663|interferon regulatory factor 5##NM_032643|IRF5|3663|interferon regulatory factor 5##AK293654|IRF5|3663|interferon regulatory factor 5##AY693665|IRF5|3663|interferon regulatory factor 5##AY693668|IRF5|3663|interferon regulatory factor 5##NM_001098629|IRF5|3663|interferon regulatory factor 5##NM_001098630|IRF5|3663|interferon regulatory factor 5##NM_001242452|IRF5|3663|interferon regulatory factor 5##DQ995492|IRF5|3663|interferon regulatory factor 5##U51127|IRF5|3663|interferon regulatory factor 5##AK297083|IRF5|3663|interferon regulatory factor 5##AY504947|IRF5|3663|interferon regulatory factor 5##AY693666|IRF5|3663|interferon regulatory factor 5##AY693667|IRF5|3663|interferon regulatory factor 5##EU258896|IRF5|3663|interferon regulatory factor 5##AK122706|KCP|375616|kielin/chordin-like protein##NM_001135914|KCP|375616|kielin/chordin-like protein##NM_199349|KCP|375616|kielin/chordin-like protein##EU258898|IRF5|3663|interferon regulatory factor 5##NM_001098627|IRF5|3663|interferon regulatory factor 5##DQ995494|IRF5|3663|interferon regulatory factor 5##AY504946|IRF5|3663|interferon regulatory factor 5##DQ277634|IRF5|3663|interferon regulatory factor 5##AJ133769|TNPO3|23534|transportin 3##AF145029|TNPO3|23534|transportin 3##AK312580|TNPO3|23534|transportin 3##BC068530|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3	0.0	
chr9	126783117	126783225	reg1041786.p2	3.533	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-9100	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-9288	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-90860	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	236839	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	237074	+	TSC_hg19_v1_chr9_+_127020255 AB026289	237093	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr1	155292976	155293157	reg1015866.p1	3.532	+	NM_001105203 NM_001105204 TSC_hg19_v1_chr1_+_155290711 AK125378 BC025680	-2366	+	TSC_hg19_v1_chr1_+_155279520 BC010004 DQ893471 DQ895943	-13519	+	AK022841 TSC_hg19_v1_chr1_+_155278730 AK291084 D14697	-14326	+	BC052277 NM_001105205	661	+	TSC_hg19_v1_chr1_-_155293939 BC080538 NM_001039517 BC062571	876	-	AK298730 NM_014328 AK093777 AX748300 BC001045 AK307736 TSC_hg19_v1_chr1_+_155294297 AK074485 AB026894 AK074982 BC028055 BC004293 BX640612	1226	+	NM_001105203|RUSC1|23623|RUN and SH3 domain containing 1##NM_001105204|RUSC1|23623|RUN and SH3 domain containing 1##AK125378|RUSC1|23623|RUN and SH3 domain containing 1##BC025680|RUSC1|23623|RUN and SH3 domain containing 1##BC010004|FDPS|2224|farnesyl diphosphate synthase##DQ893471|FDPS|2224|farnesyl diphosphate synthase##DQ895943|FDPS|2224|farnesyl diphosphate synthase##AK022841|FDPS|2224|farnesyl diphosphate synthase##AK291084|FDPS|2224|farnesyl diphosphate synthase##D14697|FDPS|2224|farnesyl diphosphate synthase##BC052277|RUSC1|23623|RUN and SH3 domain containing 1##NM_001105205|RUSC1|23623|RUN and SH3 domain containing 1##BC080538|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)##NM_001039517|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)##BC062571|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)##AK298730|RUSC1|23623|RUN and SH3 domain containing 1##NM_014328|RUSC1|23623|RUN and SH3 domain containing 1##AK093777|RUSC1|23623|RUN and SH3 domain containing 1##BC001045|RUSC1|23623|RUN and SH3 domain containing 1##AK307736|RUSC1|23623|RUN and SH3 domain containing 1##AK074485|RUSC1|23623|RUN and SH3 domain containing 1##AB026894|RUSC1|23623|RUN and SH3 domain containing 1##AK074982|RUSC1|23623|RUN and SH3 domain containing 1##BC028055|RUSC1|23623|RUN and SH3 domain containing 1##BC004293|RUSC1|23623|RUN and SH3 domain containing 1##BX640612|RUSC1|23623|RUN and SH3 domain containing 1	0.0	
chr17	42441205	42441271	reg1036773.p1	3.532	+	TSC_hg19_v1_chr17_-_42441222 BC030200 NM_198475	-16	-	TSC_hg19_v1_chr17_+_42422669 AK000607 AK222522 AK296090 X62320 AK303830	-18562	+	TSC_hg19_v1_chr17_+_42422640 AF055008	-18601	+	AB528003 J02764 BC117443 BC126442 AK297155 AK315335 M34480 NM_000419	25618	-	TSC_hg19_v1_chr17_-_42580760 BC136629 BC144323 AK025600 BC140010	139526	-	TSC_hg19_v1_chr17_-_42580958 NM_001002909	139734	-	BC030200|FAM171A2|284069|family with sequence similarity 171, member A2##NM_198475|FAM171A2|284069|family with sequence similarity 171, member A2##AK000607|GRN|2896|granulin##AK222522|GRN|2896|granulin##AK296090|GRN|2896|granulin##X62320|GRN|2896|granulin##AK303830|GRN|2896|granulin##AF055008|GRN|2896|granulin##J02764|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC117443|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC126442|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK297155|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##AK315335|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##M34480|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##NM_000419|ITGA2B|3674|integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)##BC136629|GPATCH8|23131|G patch domain containing 8##BC144323|GPATCH8|23131|G patch domain containing 8##AK025600|GPATCH8|23131|G patch domain containing 8##BC140010|GPATCH8|23131|G patch domain containing 8##NM_001002909|GPATCH8|23131|G patch domain containing 8	1.798689	CTCF.p2:11:0.949	CTCF.p2:54:0.849
chr18	55780559	55780627	reg1044618.p1	3.532	+	AF385931 NM_001144964	-66136	+	TSC_hg19_v1_chr18_+_55712924 AY243322	-67686	+	DQ890913 DQ893350 AY312514 TSC_hg19_v1_chr18_+_55711911	-68687	+	TSC_hg19_v1_chr18_+_55816551 AY112983 AY112984 DQ181796 NM_001144965 NM_001144968 NM_001144969 NM_001144971 AY112985	35964	+	TSC_hg19_v1_chr18_+_55862636 NM_001144970 AK294963 AY243318 AB007899	82137	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	108169	+	AF385931|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144964|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243322|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ890913|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ893350|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY312514|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112983|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112984|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##DQ181796|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144965|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144968|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144969|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144971|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY112985|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144970|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK294963|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243318|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AB007899|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like	0.0	
chr20	56045210	56045391	reg1033789.p1	3.532	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-78843	+	NM_001190472	-110423	-	AK292247 AY349350 NM_001015885	-118699	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	54901	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	90857	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	150238	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.0	
chr2	7139386	7139498	reg1035283.p2	3.532	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-81855	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-121579	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-132739	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1682761	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1838277	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	2004379	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr4	39699281	39699348	reg1029008.p1	3.532	+	TSC_hg19_v1_chr4_-_39640486 AK023351 BC008502 NM_174921 AK307146	-58758	-	TSC_hg19_v1_chr4_+_39529635 AK056558	-169688	+	TSC_hg19_v1_chr4_-_39529187 NM_001184700 NM_001184701 NM_003359	-170139	-	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	490	+	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	280024	-	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	280279	-	AK023351|C4orf34|201895|chromosome 4 open reading frame 34##BC008502|C4orf34|201895|chromosome 4 open reading frame 34##NM_174921|C4orf34|201895|chromosome 4 open reading frame 34##AK307146|C4orf34|201895|chromosome 4 open reading frame 34##NM_001184700|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001184701|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_003359|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	0.0	
chr7	107508166	107508248	reg1040325.p1	3.532	+	L02785 BC025671 TSC_hg19_v1_chr7_-_107443671 BX640837 NM_000111	-64553	-	TSC_hg19_v1_chr7_+_107384589 AK026762 AK307992 BC130529 BC130531 BC144176	-123626	+	AK293352 NM_024814	-123929	+	AK294146 NM_000108 TSC_hg19_v1_chr7_+_107531614 AK312346 AK295080 AK225301	23393	+	J03490 TSC_hg19_v1_chr7_+_107531617 AK297508	23409	+	AK300077 TSC_hg19_v1_chr7_+_107531630 AK225289 AK310220 AB209703 BC018648 BC018696 J03620 AB529125 CU676276	23449	+	L02785|SLC26A3|1811|solute carrier family 26, member 3##BC025671|SLC26A3|1811|solute carrier family 26, member 3##BX640837|SLC26A3|1811|solute carrier family 26, member 3##NM_000111|SLC26A3|1811|solute carrier family 26, member 3##AK026762|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK307992|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC130529|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC130531|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##BC144176|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK293352|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##NM_024814|CBLL1|79872|Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1##AK294146|DLD|1738|dihydrolipoamide dehydrogenase##NM_000108|DLD|1738|dihydrolipoamide dehydrogenase##AK312346|DLD|1738|dihydrolipoamide dehydrogenase##AK295080|DLD|1738|dihydrolipoamide dehydrogenase##AK225301|DLD|1738|dihydrolipoamide dehydrogenase##J03490|DLD|1738|dihydrolipoamide dehydrogenase##AK297508|DLD|1738|dihydrolipoamide dehydrogenase##AK300077|DLD|1738|dihydrolipoamide dehydrogenase##AK225289|DLD|1738|dihydrolipoamide dehydrogenase##AK310220|DLD|1738|dihydrolipoamide dehydrogenase##AB209703|DLD|1738|dihydrolipoamide dehydrogenase##BC018648|DLD|1738|dihydrolipoamide dehydrogenase##BC018696|DLD|1738|dihydrolipoamide dehydrogenase##J03620|DLD|1738|dihydrolipoamide dehydrogenase	0.0	
chr7	74348089	74348183	reg1020713.p2	3.532	+	BC052588 TSC_hg19_v1_chr7_+_74306933 BC027480 D38436 D38502 AK309660	-41216	+	TSC_hg19_v1_chr7_-_74306725 BC095487	-41415	-	TSC_hg19_v1_chr7_-_74306685 AK303473 AK307228 AK309007	-41453	-	BC147030 BC147031 NM_001145063	30944	+	AB463349 AF410455 AM392683 DQ893169 TSC_hg19_v1_chr7_-_74489627 AL136804 AK309117 BC007823 BC019008	141466	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	141502	-	BC052588|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##BC027480|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##D38436|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##D38502|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##AK309660|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##AK303473|STAG3L2|442582|stromal antigen 3-like 2##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##NM_001145063|GATSL1|389523|GATS protein-like 1##AF410455|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AM392683|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##DQ893169|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AL136804|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK309117|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC007823|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC019008|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16	0.525986	CTCF.p2:-29:0.526
chr8	116440118	116440199	reg1038735.p2	3.532	+	BX648252 AY210419 TSC_hg19_v1_chr8_-_114449169 BC140003 AB114604 NM_052900 NM_198123	-1991029	-	AB114605 NM_198124	-2050777	-	BC028739 AK313469 AF167082 NM_014379 AK297393	-5453192	-	TSC_hg19_v1_chr8_-_116680208 AK304046	240062	-	BC125020 AK309357 TSC_hg19_v1_chr8_-_116681203 NM_014112	241007	-	TSC_hg19_v1_chr8_-_116681365 AF183810	241177	-	BX648252|CSMD3|114788|CUB and Sushi multiple domains 3##AY210419|CSMD3|114788|CUB and Sushi multiple domains 3##BC140003|CSMD3|114788|CUB and Sushi multiple domains 3##AB114604|CSMD3|114788|CUB and Sushi multiple domains 3##NM_052900|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198123|CSMD3|114788|CUB and Sushi multiple domains 3##AB114605|CSMD3|114788|CUB and Sushi multiple domains 3##NM_198124|CSMD3|114788|CUB and Sushi multiple domains 3##BC028739|KCNV1|27012|potassium channel, subfamily V, member 1##AK313469|KCNV1|27012|potassium channel, subfamily V, member 1##AF167082|KCNV1|27012|potassium channel, subfamily V, member 1##NM_014379|KCNV1|27012|potassium channel, subfamily V, member 1##AK297393|KCNV1|27012|potassium channel, subfamily V, member 1##AK304046|TRPS1|7227|trichorhinophalangeal syndrome I##BC125020|TRPS1|7227|trichorhinophalangeal syndrome I##AK309357|TRPS1|7227|trichorhinophalangeal syndrome I##NM_014112|TRPS1|7227|trichorhinophalangeal syndrome I##AF183810|TRPS1|7227|trichorhinophalangeal syndrome I	0.0	
chr8	128999843	128999953	reg1030500.p1	3.532	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-193115	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-251408	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-251573	+	AB042405 NM_031415	1799235	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1952017	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1952108	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr9	114782604	114782760	reg1039900.p1	3.532	+	TSC_hg19_v1_chr9_+_114659446 AK314847 AB384716	-123215	+	TSC_hg19_v1_chr9_+_114659093 BC038711 D50840 NM_003358	-123568	+	AL833535 NM_173521	-236907	-	AK056704 TSC_hg19_v1_chr9_-_114937551 AY358746 BC060770 NM_022486 AK292868	154838	-	TSC_hg19_v1_chr9_-_115095273 CU692212 BC044585 NM_001244898	312605	-	TSC_hg19_v1_chr9_-_115095900 AK001685 AK302558 CR749471 BC039896	313167	-	AK314847|UGCG|7357|UDP-glucose ceramide glucosyltransferase##BC038711|UGCG|7357|UDP-glucose ceramide glucosyltransferase##D50840|UGCG|7357|UDP-glucose ceramide glucosyltransferase##NM_003358|UGCG|7357|UDP-glucose ceramide glucosyltransferase##AL833535|C9orf84|158401|chromosome 9 open reading frame 84##NM_173521|C9orf84|158401|chromosome 9 open reading frame 84##AK056704|SUSD1|64420|sushi domain containing 1##AY358746|SUSD1|64420|sushi domain containing 1##BC060770|SUSD1|64420|sushi domain containing 1##NM_022486|SUSD1|64420|sushi domain containing 1##AK292868|SUSD1|64420|sushi domain containing 1##BC044585|PTBP3|9991|polypyrimidine tract binding protein 3##NM_001244898|PTBP3|9991|polypyrimidine tract binding protein 3##AK001685|PTBP3|9991|polypyrimidine tract binding protein 3##AK302558|PTBP3|9991|polypyrimidine tract binding protein 3##CR749471|PTBP3|9991|polypyrimidine tract binding protein 3##BC039896|PTBP3|9991|polypyrimidine tract binding protein 3	0.0	
chr9	132647025	132647206	reg1017615.p2	3.532	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-49350	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-49393	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-49431	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	158239	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	158373	-	BC039728 NM_001136557 NM_001136558 NM_020960	168869	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr10	103825004	103825097	reg1029153.p2	3.531	+	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	-9138	-	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	-221443	-	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	-225438	-	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	92	+	AK300588 TSC_hg19_v1_chr10_-_103874641	49569	-	TSC_hg19_v1_chr10_-_103874760 BC000482 BC009246 NM_003893	49678	-	BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6##AK300588|LDB1|8861|LIM domain binding 1##BC000482|LDB1|8861|LIM domain binding 1##BC009246|LDB1|8861|LIM domain binding 1##NM_003893|LDB1|8861|LIM domain binding 1	0.0	
chr12	102233852	102234033	reg1011557.p2	3.531	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	-9356	-	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	-100723	-	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	-142320	+	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	37176	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	37516	+	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	221808	-	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1##CR457171|CCDC53|51019|coiled-coil domain containing 53	0.0	
chr13	31191947	31192038	reg1026111.p2	3.531	+	NM_005800 BC038103 TSC_hg19_v1_chr13_+_31192056 BC036027 AK289826 CR627370 X59131 BC012594 AL832776	-29	+	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	-365	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	-151934	-	AK314143 NM_001204406	95622	+	NM_001629 TSC_hg19_v1_chr13_+_31309681	117672	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	117723	+	NM_005800|USPL1|10208|ubiquitin specific peptidase like 1##BC038103|USPL1|10208|ubiquitin specific peptidase like 1##BC036027|USPL1|10208|ubiquitin specific peptidase like 1##AK289826|USPL1|10208|ubiquitin specific peptidase like 1##CR627370|USPL1|10208|ubiquitin specific peptidase like 1##X59131|USPL1|10208|ubiquitin specific peptidase like 1##BC012594|USPL1|10208|ubiquitin specific peptidase like 1##AL832776|USPL1|10208|ubiquitin specific peptidase like 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001629|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein	0.0	
chr13	31648305	31648413	reg1036813.p1	3.531	+	TSC_hg19_v1_chr13_+_31506809 BC030277 NM_152325 CU688876	-141529	+	NM_032849 AK055635 TSC_hg19_v1_chr13_+_31480407 AL832478 BC040165 BC101624 BC101626 CU691826	-167879	+	TSC_hg19_v1_chr13_+_31309712 BC018538 DQ891647 DQ894836 AB590814 CU676260	-338644	+	CU691504 DQ891727 DQ894904 AF039695 TSC_hg19_v1_chr13_-_31735849	87435	-	AB003333 TSC_hg19_v1_chr13_-_31736042 BC037553 AB003334 D86956 BC018124 AK314576 AK293955 NM_006644 AK302294 AK303029 AK311464 AK307597	87744	-	TSC_hg19_v1_chr13_+_31774111 NM_194318	125744	+	BC030277|C13orf26|122046|chromosome 13 open reading frame 26##NM_152325|C13orf26|122046|chromosome 13 open reading frame 26##NM_032849|C13orf33|84935|chromosome 13 open reading frame 33##AK055635|C13orf33|84935|chromosome 13 open reading frame 33##BC040165|C13orf33|84935|chromosome 13 open reading frame 33##BC101624|C13orf33|84935|chromosome 13 open reading frame 33##BC101626|C13orf33|84935|chromosome 13 open reading frame 33##BC018538|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891647|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ894836|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##DQ891727|HSPH1|10808|heat shock 105kDa/110kDa protein 1##DQ894904|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AF039695|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AB003333|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC037553|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AB003334|HSPH1|10808|heat shock 105kDa/110kDa protein 1##D86956|HSPH1|10808|heat shock 105kDa/110kDa protein 1##BC018124|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK314576|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK293955|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_006644|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK302294|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK303029|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK311464|HSPH1|10808|heat shock 105kDa/110kDa protein 1##AK307597|HSPH1|10808|heat shock 105kDa/110kDa protein 1##NM_194318|B3GALTL|145173|beta 1,3-galactosyltransferase-like	0.0	
chr16	3928778	3928850	reg1035843.p2	3.531	+	TSC_hg19_v1_chr16_-_3843474 AK304771	-85288	-	TSC_hg19_v1_chr16_-_3767521 U12595 BC001455 AF043254 AB528744 CU676340 DQ893476 DQ896346 BC000406 BC002994 AF154108 AK299127 BC018950 AK223049 AK223076 AK223205 BC023585 AK093344 NM_016292	-161279	-	NM_005223	-225875	+	AB210043 NM_001079846 NM_004380	1306	-	TSC_hg19_v1_chr16_-_3930711 U47741	1884	-	TSC_hg19_v1_chr16_-_3930715 U85962	1903	-	AK304771|CREBBP|1387|CREB binding protein##U12595|TRAP1|10131|TNF receptor-associated protein 1##BC001455|TRAP1|10131|TNF receptor-associated protein 1##AF043254|TRAP1|10131|TNF receptor-associated protein 1##DQ893476|TRAP1|10131|TNF receptor-associated protein 1##DQ896346|TRAP1|10131|TNF receptor-associated protein 1##BC000406|TRAP1|10131|TNF receptor-associated protein 1##BC002994|TRAP1|10131|TNF receptor-associated protein 1##AF154108|TRAP1|10131|TNF receptor-associated protein 1##AK299127|TRAP1|10131|TNF receptor-associated protein 1##BC018950|TRAP1|10131|TNF receptor-associated protein 1##AK223049|TRAP1|10131|TNF receptor-associated protein 1##AK223076|TRAP1|10131|TNF receptor-associated protein 1##AK223205|TRAP1|10131|TNF receptor-associated protein 1##BC023585|TRAP1|10131|TNF receptor-associated protein 1##AK093344|TRAP1|10131|TNF receptor-associated protein 1##NM_016292|TRAP1|10131|TNF receptor-associated protein 1##NM_005223|DNASE1|1773|deoxyribonuclease I##AB210043|CREBBP|1387|CREB binding protein##NM_001079846|CREBBP|1387|CREB binding protein##NM_004380|CREBBP|1387|CREB binding protein##U47741|CREBBP|1387|CREB binding protein##U85962|CREBBP|1387|CREB binding protein	0.0	
chr17	45308512	45308591	reg1036523.p1	3.531	+	NM_002476 TSC_hg19_v1_chr17_+_45286713 BC030228 M24121 M36172 X13955 AB528188 AM392523 AM392536 AM392902 AM393643 AM393677	-21801	+	NM_001002841 X52005	-22101	+	NM_001114091 NM_001256 TSC_hg19_v1_chr17_-_45266669	-41867	-	TSC_hg19_v1_chr17_+_45331192 BC127666 BC127667 J02703 NM_000212 M35999 M20311	22633	+	AY826979 TSC_hg19_v1_chr17_+_45331224 AB587392 U95204	22673	+	TSC_hg19_v1_chr17_+_45331260 AK300424	22707	+	NM_002476|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##BC030228|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##M24121|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##M36172|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##X13955|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##AM392523|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##AM392536|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##AM392902|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##AM393643|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##AM393677|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##NM_001002841|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##X52005|MYL4|4635|myosin, light chain 4, alkali; atrial, embryonic##NM_001114091|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##NM_001256|CDC27|996|cell division cycle 27 homolog (S. cerevisiae)##BC127666|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##BC127667|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##J02703|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##NM_000212|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M35999|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##M20311|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##AY826979|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)##U95204|ITGB3|3690|integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)	0.0	
chr19	40256245	40256369	reg1042965.p1	3.531	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	-27668	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	-61264	+	FJ613352 NM_001190441	-109762	+	NM_001143832	10926	+	TSC_hg19_v1_chr19_-_40324779 AF205861 BC025291 AK074971 BC009688 AK302127 BC018751 NM_004714 NM_006483 NM_006484 Y17999	68491	-	BC019609 BC015218 TSC_hg19_v1_chr19_-_40331308 AB451384 BT006830 BT020144 CR457069	74984	-	FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001143832|LEUTX|342900|leucine twenty homeobox##AF205861|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC025291|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK074971|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC009688|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##AK302127|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC018751|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_004714|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006483|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##NM_006484|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##Y17999|DYRK1B|9149|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B##BC019609|FBL|2091|fibrillarin##BC015218|FBL|2091|fibrillarin##AB451384|FBL|2091|fibrillarin##BT006830|FBL|2091|fibrillarin##BT020144|FBL|2091|fibrillarin##CR457069|FBL|2091|fibrillarin	0.990467	CTCF.p2:-6:0.990
chr20	35437314	35437464	reg1005650.p2	3.531	+	AK057056 TSC_hg19_v1_chr20_-_35407842	-29613	-	TSC_hg19_v1_chr20_-_35402167 BC035821 AK093031 AX747868 AK290738 NM_001145316 NM_024918 AK301671 AK301840 BC058899 AK023408 BC026011 NM_001145315 NM_001145317 NM_001145318	-35204	-	TSC_hg19_v1_chr20_-_35374542 NM_022477 NM_032013	-62837	-	TSC_hg19_v1_chr20_-_35444558 AK131491	7231	-	AK126630 NM_199181	50886	-	TSC_hg19_v1_chr20_-_35492072 NM_080627	54745	-	AK057056|KIAA0889|140710|KIAA0889##BC035821|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK093031|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK290738|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145316|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_024918|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301671|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK301840|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC058899|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##AK023408|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##BC026011|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145315|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145317|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_001145318|DSN1|79980|DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)##NM_022477|NDRG3|57446|NDRG family member 3##NM_032013|NDRG3|57446|NDRG family member 3##AK131491|KIAA0889|140710|KIAA0889##AK126630|KIAA0889|140710|KIAA0889##NM_199181|KIAA0889|140710|KIAA0889##NM_080627|KIAA0889|140710|KIAA0889	0.0	
chr20	5628159	5628225	reg1034094.p2	3.531	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	-36605	-	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-333156	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-520497	+	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	102874	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	263934	+	TSC_hg19_v1_chr20_-_5931136 AK300812 AB385432 AB032979 BC001262 AK000613 AK308648 AF132943 NM_015939 AK309205	302931	-	AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)##AK300812|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AB032979|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##BC001262|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK000613|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK308648|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AF132943|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##NM_015939|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)##AK309205|TRMT6|51605|tRNA methyltransferase 6 homolog (S. cerevisiae)	0.0	
chr21	47840502	47840600	reg1041411.p1	3.531	+	TSC_hg19_v1_chr21_+_47744613 AB007862	-95893	+	TSC_hg19_v1_chr21_+_47744054 NM_006031 AK024009 BC035913 U52962 AF515282	-96464	+	BC067876 TSC_hg19_v1_chr21_-_47743788 BC098408 BC044223 BC121007 BC121008 AK056387 NM_058180 BC026042	-96781	-	TSC_hg19_v1_chr21_-_47878602 AK127572	38050	-	TSC_hg19_v1_chr21_+_47878854 AK303351 NM_001146114 NM_001146115 NM_001146116 NM_015151 NM_206889 NM_206890 NM_206891 BC038443 BC033718 AF490768	38311	+	AK056738 TSC_hg19_v1_chr21_+_47878972 AB273729	38445	+	AB007862|PCNT|5116|pericentrin##NM_006031|PCNT|5116|pericentrin##AK024009|PCNT|5116|pericentrin##BC035913|PCNT|5116|pericentrin##U52962|PCNT|5116|pericentrin##AF515282|PCNT|5116|pericentrin##BC098408|C21orf58|54058|chromosome 21 open reading frame 58##BC044223|C21orf58|54058|chromosome 21 open reading frame 58##BC121007|C21orf58|54058|chromosome 21 open reading frame 58##BC121008|C21orf58|54058|chromosome 21 open reading frame 58##AK056387|C21orf58|54058|chromosome 21 open reading frame 58##NM_058180|C21orf58|54058|chromosome 21 open reading frame 58##BC026042|C21orf58|54058|chromosome 21 open reading frame 58##AK303351|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146114|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146115|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_001146116|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_015151|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206889|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206890|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##NM_206891|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##BC038443|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##BC033718|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AF490768|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AK056738|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)##AB273729|DIP2A|23181|DIP2 disco-interacting protein 2 homolog A (Drosophila)	0.940152	CTCF.p2:30:0.940
chr3	177069836	177069937	reg1030953.p2	3.531	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-154827	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	-154935	-	TSC_hg19_v1_chr3_-_176914267 BX648935	-155636	-	BC017825 NM_181361	1184337	+	AF209747 NM_005832	1206666	+	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	1719679	-	AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3	0.0	
chr6	149526561	149526657	reg1043527.p1	3.531	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-458400	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-862418	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-862619	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	112494	+	AK315038 NM_015093 AK307650	112832	+	AY340238 NM_001002255 BC130305 HQ258040	194899	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr7	128337510	128337602	reg1026139.p1	3.531	+	BC066973 NM_001012454 NM_001128926 BC105729 BC105730 BC105731 BC047310	-25210	+	NM_018396 TSC_hg19_v1_chr7_+_128116813 AK302775 BC107586 AK002212 BC064929 BC121115 BC121116 AK299960	-220719	+	TSC_hg19_v1_chr7_+_128095931 NM_001098786 NM_013332 AF144755 AK024729 AK222583 BC008573 BC001863 BC093742 BC112183	-241590	+	TSC_hg19_v1_chr7_+_128349114 AK093161 AK302221 AX747964 BC040906 AK310426	11571	+	BC032842 AF367470 NM_032599 AK313608 AK310308 BC037248	17885	+	HM002604 HM002605 HM002606 HM002607 HM002608 HM002609 HM002610 HM002611 HM002612 HM002613 HM002614 HM002615 HM002616 NM_001130674 NM_001199671 NM_001199672 NM_001199673 NM_001199674 NM_001219 TSC_hg19_v1_chr7_+_128379382	41813	+	BC066973|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001012454|FAM71F2|346653|family with sequence similarity 71, member F2##NM_001128926|FAM71F2|346653|family with sequence similarity 71, member F2##BC105729|FAM71F2|346653|family with sequence similarity 71, member F2##BC105730|FAM71F2|346653|family with sequence similarity 71, member F2##BC105731|FAM71F2|346653|family with sequence similarity 71, member F2##BC047310|FAM71F2|346653|family with sequence similarity 71, member F2##NM_018396|METTL2B|55798|methyltransferase like 2B##AK302775|METTL2B|55798|methyltransferase like 2B##BC107586|METTL2B|55798|methyltransferase like 2B##AK002212|METTL2B|55798|methyltransferase like 2B##BC064929|METTL2B|55798|methyltransferase like 2B##BC121115|METTL2B|55798|methyltransferase like 2B##BC121116|METTL2B|55798|methyltransferase like 2B##AK299960|METTL2B|55798|methyltransferase like 2B##NM_001098786|HILPDA|29923|hypoxia inducible lipid droplet-associated##NM_013332|HILPDA|29923|hypoxia inducible lipid droplet-associated##AF144755|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK024729|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK222583|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC008573|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC001863|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC093742|HILPDA|29923|hypoxia inducible lipid droplet-associated##BC112183|HILPDA|29923|hypoxia inducible lipid droplet-associated##AK093161|FAM71F1|84691|family with sequence similarity 71, member F1##AK302221|FAM71F1|84691|family with sequence similarity 71, member F1##BC040906|FAM71F1|84691|family with sequence similarity 71, member F1##AK310426|FAM71F1|84691|family with sequence similarity 71, member F1##BC032842|FAM71F1|84691|family with sequence similarity 71, member F1##AF367470|FAM71F1|84691|family with sequence similarity 71, member F1##NM_032599|FAM71F1|84691|family with sequence similarity 71, member F1##AK313608|FAM71F1|84691|family with sequence similarity 71, member F1##AK310308|FAM71F1|84691|family with sequence similarity 71, member F1##BC037248|FAM71F1|84691|family with sequence similarity 71, member F1##HM002604|CALU|813|calumenin##HM002605|CALU|813|calumenin##HM002606|CALU|813|calumenin##HM002607|CALU|813|calumenin##HM002609|CALU|813|calumenin##HM002610|CALU|813|calumenin##HM002611|CALU|813|calumenin##HM002613|CALU|813|calumenin##HM002615|CALU|813|calumenin##HM002616|CALU|813|calumenin##NM_001130674|CALU|813|calumenin##NM_001199671|CALU|813|calumenin##NM_001199672|CALU|813|calumenin##NM_001199673|CALU|813|calumenin##NM_001199674|CALU|813|calumenin##NM_001219|CALU|813|calumenin	0.0	
chr7	152133989	152134113	reg1028670.p2	3.531	+	TSC_hg19_v1_chr7_-_152133074 NM_170606	-970	-	TSC_hg19_v1_chr7_-_152133040 AY024361	-1059	-	TSC_hg19_v1_chr7_+_151722852 AK025287	-411199	+	TSC_hg19_v1_chr7_+_152161285 BC036622	27188	+	AB590731 CU692064 TSC_hg19_v1_chr7_-_152373227 BC042137 AK313607 Y08837 AF035587 NM_005431	239157	-	TSC_hg19_v1_chr7_+_152456872 NM_001040135 NM_020445 AK315534 BC008682 AK294292 AK316078 AF086920 BC015207 AF023453 CU677239 CU679037 DQ894754 EU176295	322842	+	NM_170606|MLL3|58508|myeloid/lymphoid or mixed-lineage leukemia 3##AY024361|MLL3|58508|myeloid/lymphoid or mixed-lineage leukemia 3##AK025287|GALNT11|63917|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11)##BC036622|LOC100128822|100128822|uncharacterized LOC100128822##BC042137|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AK313607|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##Y08837|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##AF035587|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##NM_005431|XRCC2|7516|X-ray repair complementing defective repair in Chinese hamster cells 2##NM_001040135|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##NM_020445|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK315534|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC008682|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK294292|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AK316078|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF086920|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##BC015207|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##AF023453|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##DQ894754|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)##EU176295|ACTR3B|57180|ARP3 actin-related protein 3 homolog B (yeast)	0.0	
chr9	129568225	129568305	reg1037426.p2	3.531	+	TSC_hg19_v1_chr9_+_129567318 NM_001135776 NM_014007 AF049907 AK026123 BC008828	-955	+	NM_001174146 NM_001174147 NM_002316 AB587444 BC112120 BC113491 BC143801 AF057135 BC069601 CU686928 HQ258228 BC069588	-191504	+	TSC_hg19_v1_chr9_+_129089122 NM_001011703 NM_033446 AK024432 BC028675 BC000122 CU688540	-479098	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	54679	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	108839	+	AF221098 NM_001190728 AB385313 CU689706	156270	+	NM_001135776|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_014007|ZBTB43|23099|zinc finger and BTB domain containing 43##AF049907|ZBTB43|23099|zinc finger and BTB domain containing 43##AK026123|ZBTB43|23099|zinc finger and BTB domain containing 43##BC008828|ZBTB43|23099|zinc finger and BTB domain containing 43##NM_001174146|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001174147|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_002316|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC112120|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC113491|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC143801|LMX1B|4010|LIM homeobox transcription factor 1, beta##AF057135|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069601|LMX1B|4010|LIM homeobox transcription factor 1, beta##HQ258228|LMX1B|4010|LIM homeobox transcription factor 1, beta##BC069588|LMX1B|4010|LIM homeobox transcription factor 1, beta##NM_001011703|FAM125B|89853|family with sequence similarity 125, member B##NM_033446|FAM125B|89853|family with sequence similarity 125, member B##AK024432|FAM125B|89853|family with sequence similarity 125, member B##BC028675|FAM125B|89853|family with sequence similarity 125, member B##BC000122|FAM125B|89853|family with sequence similarity 125, member B##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AF221098|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190728|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1	0.0	
chrX	23801298	23801403	reg1014101.p2	3.531	+	NM_002970 TSC_hg19_v1_chrX_+_23801289 AK310078 BC008424 AK312162 AK310094 M77693 AL050290 BC002503 AK315888	-38	+	TSC_hg19_v1_chrX_-_23761415 NM_001033583 NM_001037171	-39940	-	BX648512 AK000659 TSC_hg19_v1_chrX_-_23761394	-39959	-	TSC_hg19_v1_chrX_+_23801432 M55580 AY841998 AB464243 AM392717 BT006825 CR450294	99	+	TSC_hg19_v1_chrX_-_23855464 AK303908 D28399	54110	-	TSC_hg19_v1_chrX_-_23926052 AY359114 AK311865 AF061264 BC016814 BC002333 BC010102 NM_024122	124660	-	NM_002970|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK310078|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BC008424|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK312162|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##M77693|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AL050290|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BC002503|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK315888|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##NM_001033583|ACOT9|23597|acyl-CoA thioesterase 9##NM_001037171|ACOT9|23597|acyl-CoA thioesterase 9##BX648512|ACOT9|23597|acyl-CoA thioesterase 9##AK000659|ACOT9|23597|acyl-CoA thioesterase 9##M55580|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AY841998|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##BT006825|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##CR450294|SAT1|6303|spermidine/spermine N1-acetyltransferase 1##AK303908|RPL9|6133|ribosomal protein L9##AY359114|APOO|79135|apolipoprotein O##AK311865|APOO|79135|apolipoprotein O##AF061264|APOO|79135|apolipoprotein O##BC016814|APOO|79135|apolipoprotein O##BC002333|APOO|79135|apolipoprotein O##BC010102|APOO|79135|apolipoprotein O##NM_024122|APOO|79135|apolipoprotein O	0.087607	
chr10	104264859	104265000	reg1030247.p2	3.530	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	-1110	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	-1210	+	CU674342 AM393135 DQ892689 DQ895934 AB462953 BC026016 TSC_hg19_v1_chr10_-_104262470 BC000693 Z14978 X82206 AK302072 AK312506 AK297362 AK297620 NM_005736	-2472	-	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	139355	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	209168	-	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	209416	+	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2	0.0	
chr10	99447188	99447257	reg1028768.p3	3.530	+	TSC_hg19_v1_chr10_-_99446983 AK223099 AF218019 AK024533 AK222493 AF131791 NM_021732 AF241786 AY505173	-193	-	TSC_hg19_v1_chr10_+_99400490 BC003167 DQ893537 DQ893758 BT007330	-46738	+	TSC_hg19_v1_chr10_+_99400444 AJ303098 NM_018425	-46780	+	TSC_hg19_v1_chr10_+_99473461 NM_031484	26242	+	BC062544 BC004995 TSC_hg19_v1_chr10_+_99473485 AF325259	26259	+	TSC_hg19_v1_chr10_+_99496884 AK296295 NM_001002262 NM_001174119 NM_001174120 NM_001174121 NM_001174122 NM_144588 AK057481 AK097945 AK299735 AK300438 BC030621	49646	+	AK223099|AVPI1|60370|arginine vasopressin-induced 1##AF218019|AVPI1|60370|arginine vasopressin-induced 1##AK024533|AVPI1|60370|arginine vasopressin-induced 1##AK222493|AVPI1|60370|arginine vasopressin-induced 1##AF131791|AVPI1|60370|arginine vasopressin-induced 1##NM_021732|AVPI1|60370|arginine vasopressin-induced 1##AF241786|AVPI1|60370|arginine vasopressin-induced 1##BC003167|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##DQ893537|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##DQ893758|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##BT007330|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##AJ303098|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##NM_018425|PI4K2A|55361|phosphatidylinositol 4-kinase type 2 alpha##NM_031484|MARVELD1|83742|MARVEL domain containing 1##BC062544|MARVELD1|83742|MARVEL domain containing 1##BC004995|MARVELD1|83742|MARVEL domain containing 1##AF325259|MARVELD1|83742|MARVEL domain containing 1##AK296295|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001002262|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174119|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174120|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174121|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_001174122|ZFYVE27|118813|zinc finger, FYVE domain containing 27##NM_144588|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK057481|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK097945|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK299735|ZFYVE27|118813|zinc finger, FYVE domain containing 27##AK300438|ZFYVE27|118813|zinc finger, FYVE domain containing 27##BC030621|ZFYVE27|118813|zinc finger, FYVE domain containing 27	0.0	
chr16	11139920	11140059	reg1036529.p2	3.530	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-101546	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-103754	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-103823	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	210061	-	X63758 BC096135 BC096136 BC096137 NM_005425	223149	-	NM_021247	227462	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr17	30814685	30814840	reg1030282.p1	3.530	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-2	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-165	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-691	+	CU688936 AB385376 AB018270 BC146763 NM_015194	389133	-	TSC_hg19_v1_chr17_-_31204141 AK127942	389361	-	TSC_hg19_v1_chr17_-_31204196 BC030602	389451	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.0	
chr17	70417545	70417726	reg1026198.p2	3.530	+	TSC_hg19_v1_chr17_+_70117187 BC007951	-300395	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-300465	+	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	-300476	+	AK000477 TSC_hg19_v1_chr17_-_70588944	171308	-	AF331643 TSC_hg19_v1_chr17_-_71088816	671181	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	671188	-	BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##AK000477|LOC100499467|100499467|uncharacterized LOC100499467##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr2	177682171	177682258	reg1037984.p1	3.530	+	BC013438 TSC_hg19_v1_chr2_-_177502718	-179526	-	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-547975	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-628798	+	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	395260	+	AK311688 NM_001145412 NM_001145413	446357	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	447162	-	BC013438|LOC375295|375295|uncharacterized LOC375295##NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.0	
chr3	196669410	196669560	reg1021464.p2	3.530	+	AB528874 BT006842 CU674628 TSC_hg19_v1_chr3_-_196669398 DQ890703 DQ893887 AY644767 BX647994 D59253 BC001255 X84157 AK296144 AK316601 BX537372 NM_001042540 NM_007362 AK308192	-65	-	AK093216 AK297506 TSC_hg19_v1_chr3_-_196669320	-194	-	TSC_hg19_v1_chr3_+_196594770 BC030705	-74715	+	TSC_hg19_v1_chr3_+_196669529 BC062368 AK123020	25	+	TSC_hg19_v1_chr3_+_196669559 AL832915 BC000257 BC007882	86	+	TSC_hg19_v1_chr3_-_196695705 BC018804 BC044640 AK022830 NM_025163	26193	-	BT006842|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##DQ890703|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##DQ893887|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AY644767|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##BX647994|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##D59253|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##BC001255|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##X84157|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AK296144|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AK316601|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##BX537372|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##NM_001042540|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##NM_007362|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AK308192|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AK093216|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##AK297506|NCBP2|22916|nuclear cap binding protein subunit 2, 20kDa##BC030705|SENP5|205564|SUMO1/sentrin specific peptidase 5##BC062368|LOC152217|152217|uncharacterized LOC152217##AK123020|LOC152217|152217|uncharacterized LOC152217##AL832915|LOC152217|152217|uncharacterized LOC152217##BC000257|LOC152217|152217|uncharacterized LOC152217##BC007882|LOC152217|152217|uncharacterized LOC152217##BC018804|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##BC044640|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##AK022830|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z##NM_025163|PIGZ|80235|phosphatidylinositol glycan anchor biosynthesis, class Z	0.0	
chr3	31608636	31608740	reg1037609.p1	3.530	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	-34206	+	TSC_hg19_v1_chr3_+_31574468 AK074587	-34239	+	TSC_hg19_v1_chr3_+_31574119 AK311488	-34558	+	TSC_hg19_v1_chr3_-_32022751 BC003168 AF346291 AK304067 AK097503	414081	-	AK294003 NM_001137674	414577	+	AF392451 NM_001174060 NM_017784	414601	-	AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##BC003168|OSBPL10|114884|oxysterol binding protein-like 10##AF346291|OSBPL10|114884|oxysterol binding protein-like 10##AK304067|OSBPL10|114884|oxysterol binding protein-like 10##AK294003|ZNF860|344787|zinc finger protein 860##NM_001137674|ZNF860|344787|zinc finger protein 860##AF392451|OSBPL10|114884|oxysterol binding protein-like 10##NM_001174060|OSBPL10|114884|oxysterol binding protein-like 10##NM_017784|OSBPL10|114884|oxysterol binding protein-like 10	0.61084	CTCF.p2:9:0.611
chr3	46134159	46134244	reg1031691.p1	3.530	+	AB189434 AB189435 NM_001024644 NM_005283	-65223	-	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	-96880	-	NM_006564 Y13248	-149229	+	BC064991 TSC_hg19_v1_chr3_-_46249804 L10918 BC051306 NM_001295	115608	-	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	149715	+	AK292685 NM_001123041 NM_001123396	261028	+	AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##BC064991|CCR1|1230|chemokine (C-C motif) receptor 1##L10918|CCR1|1230|chemokine (C-C motif) receptor 1##BC051306|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001295|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2	0.0	
chr4	114460688	114460817	reg1041414.p1	3.530	+	TSC_hg19_v1_chr4_+_114214102 AK294720	-246633	+	NM_001148 NM_020977 TSC_hg19_v1_chr4_+_113970812 AK299767 AK307601 X56958 AB385222 Z26634	-489918	+	TSC_hg19_v1_chr4_+_113739259 AK095596 NM_001127493 AK299815 BX537758	-721451	+	AB384909 AF071569 AY987011 DQ895255 EU176241 BC032784 TSC_hg19_v1_chr4_-_114682321	221529	-	TSC_hg19_v1_chr4_-_114682341 AK294517	221604	-	BC022558 TSC_hg19_v1_chr4_-_114682567	221814	-	AK294720|ANK2|287|ankyrin 2, neuronal##NM_001148|ANK2|287|ankyrin 2, neuronal##NM_020977|ANK2|287|ankyrin 2, neuronal##AK299767|ANK2|287|ankyrin 2, neuronal##AK307601|ANK2|287|ankyrin 2, neuronal##X56958|ANK2|287|ankyrin 2, neuronal##Z26634|ANK2|287|ankyrin 2, neuronal##AK095596|ANK2|287|ankyrin 2, neuronal##NM_001127493|ANK2|287|ankyrin 2, neuronal##AK299815|ANK2|287|ankyrin 2, neuronal##BX537758|ANK2|287|ankyrin 2, neuronal##AF071569|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AY987011|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##DQ895255|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##EU176241|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC032784|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK294517|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##BC022558|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta	0.0	
chr7	2812671	2812796	reg1035399.p1	3.530	+	AK289723 AB075830 BC146753 NM_133463	-93575	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-141030	+	TSC_hg19_v1_chr7_+_2671621 NM_025250 AB051478 BC152447	-141130	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	71075	-	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	270729	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	528266	+	AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##NM_025250|TTYH3|80727|tweety homolog 3 (Drosophila)##AB051478|TTYH3|80727|tweety homolog 3 (Drosophila)##BC152447|TTYH3|80727|tweety homolog 3 (Drosophila)##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1	0.0	
chrX	11577231	11577347	reg1040981.p1	3.530	+	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	-265747	+	AF177663 NM_013423 AK297713	-293181	-	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	-447820	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	106531	-	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	199054	+	NM_001193270 AK300814	199428	+	AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase##AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	0.707677	CTCF.p2:-19:0.708
chrX	12014680	12014781	reg1037116.p1	3.530	+	NM_006800 AK025642	-236983	+	NM_001193270 AK300814	-238013	+	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	-238387	+	AB002314 NM_014728 AK289694	141860	+	NM_001039091 NM_002765 AK313246 TSC_hg19_v1_chrX_+_12809516	794767	+	TSC_hg19_v1_chrX_+_12809530 BC040483 BC030019 BC110875 BC119662 BC119663 Y00971 CU691884	794838	+	NM_006800|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK025642|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AB002314|FRMPD4|9758|FERM and PDZ domain containing 4##NM_014728|FRMPD4|9758|FERM and PDZ domain containing 4##AK289694|FRMPD4|9758|FERM and PDZ domain containing 4##NM_001039091|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##NM_002765|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##AK313246|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC040483|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC030019|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC110875|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119662|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##BC119663|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2##Y00971|PRPS2|5634|phosphoribosyl pyrophosphate synthetase 2	0.0	
chrX	39336816	39336936	reg1043813.p1	3.530	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-673336	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-673416	+	BC008908 NM_021242	-673804	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	619816	-	BC114220 NM_001123383 NM_001123384	699705	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	1103310	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.204123	CTCF.p2:-78:0.204
chr11	126873540	126873629	reg1037333.p1	3.529	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-279	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-2859	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-2924	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	1518379	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	1518550	-	BX640634 NM_001143820	1583868	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.976558	CTCF.p2:20:0.977
chr1	117421592	117421659	reg1035853.p1	3.529	+	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	-124518	+	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	-211242	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	-307948	-	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	31017	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	122780	+	AK291017 TSC_hg19_v1_chr1_+_117602939	181299	+	AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule##AK291017|TTF2|8458|transcription termination factor, RNA polymerase II	0.0	
chr11	61732973	61733091	reg1038673.p2	3.529	+	CU677245 AK293701 TSC_hg19_v1_chr11_+_61722706 AK301392	-10370	+	BC015220 NM_001139443 NM_004183	-15677	+	TSC_hg19_v1_chr11_-_61684983 BC022239 NM_013401	-48044	-	CU688148 DQ891113 DQ894293 AB463634 AF088851 M12937 BC015156 M11146 X00318 M97164 TSC_hg19_v1_chr11_-_61735040 BC016857 BC001399	1945	-	BC020300 BC015946 BC063514 TSC_hg19_v1_chr11_-_61735103 BC011359 BC070494 AB062402 BC013724 BC073750 BC000857 BC035441 AK307190 AK311818 BC016009 BC066341 BC066961 BC104643 BC105802 L20941 D28463	2055	-	TSC_hg19_v1_chr11_-_61735173 NM_002032	2115	-	AK293701|BEST1|7439|bestrophin 1##AK301392|BEST1|7439|bestrophin 1##BC015220|BEST1|7439|bestrophin 1##NM_001139443|BEST1|7439|bestrophin 1##NM_004183|BEST1|7439|bestrophin 1##BC022239|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##NM_013401|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##DQ891113|FTH1|2495|ferritin, heavy polypeptide 1##DQ894293|FTH1|2495|ferritin, heavy polypeptide 1##AF088851|FTH1|2495|ferritin, heavy polypeptide 1##M12937|FTH1|2495|ferritin, heavy polypeptide 1##BC015156|FTH1|2495|ferritin, heavy polypeptide 1##M11146|FTH1|2495|ferritin, heavy polypeptide 1##X00318|FTH1|2495|ferritin, heavy polypeptide 1##M97164|FTH1|2495|ferritin, heavy polypeptide 1##BC016857|FTH1|2495|ferritin, heavy polypeptide 1##BC001399|FTH1|2495|ferritin, heavy polypeptide 1##BC020300|FTH1|2495|ferritin, heavy polypeptide 1##BC015946|FTH1|2495|ferritin, heavy polypeptide 1##BC063514|FTH1|2495|ferritin, heavy polypeptide 1##BC011359|FTH1|2495|ferritin, heavy polypeptide 1##BC070494|FTH1|2495|ferritin, heavy polypeptide 1##AB062402|FTH1|2495|ferritin, heavy polypeptide 1##BC013724|FTH1|2495|ferritin, heavy polypeptide 1##BC073750|FTH1|2495|ferritin, heavy polypeptide 1##BC000857|FTH1|2495|ferritin, heavy polypeptide 1##BC035441|FTH1|2495|ferritin, heavy polypeptide 1##AK307190|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK311818|FTH1|2495|ferritin, heavy polypeptide 1##BC016009|FTH1|2495|ferritin, heavy polypeptide 1##BC066341|FTH1|2495|ferritin, heavy polypeptide 1##BC066961|FTH1|2495|ferritin, heavy polypeptide 1##BC104643|FTH1|2495|ferritin, heavy polypeptide 1##BC105802|FTH1|2495|ferritin, heavy polypeptide 1##L20941|FTH1|2495|ferritin, heavy polypeptide 1##D28463|FTH1|2495|ferritin, heavy polypeptide 1##NM_002032|FTH1|2495|ferritin, heavy polypeptide 1	0.0	
chr1	240150575	240150700	reg1037147.p1	3.529	+	AF279779 NM_000740	-358265	+	TSC_hg19_v1_chr1_+_239550016 AK056349	-600695	+	AK314151 NM_021186	-2096416	-	TSC_hg19_v1_chr1_+_240255182 NM_020066	104540	+	BC046632 TSC_hg19_v1_chr1_-_240775431	624772	-	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	624817	-	AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##NM_020066|FMN2|56776|formin 2##BC046632|GREM2|64388|gremlin 2##AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2	0.99969	CTCF.p2:4:1.000
chr1	32706182	32706283	reg1034965.p2	3.529	+	TSC_hg19_v1_chr1_+_32688054 AB590351 BC003140 BT019597 CU678398 DQ891249 DQ894600	-18137	+	U36764 TSC_hg19_v1_chr1_+_32688016 AK225024 U39067 BC000413 BC018815	-18202	+	TSC_hg19_v1_chr1_+_32688011 AK130633	-18222	+	TSC_hg19_v1_chr1_-_32707234 AL833686 AK055560	1023	-	NM_032648 BC004269	6593	+	NM_005356 TSC_hg19_v1_chr1_+_32716847 AK098027 X05027 U23852 M36881 X13529	10653	+	BC003140|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##BT019597|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##DQ891249|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##DQ894600|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##U36764|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##AK225024|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##U39067|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##BC000413|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##BC018815|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##AK130633|EIF3I|8668|eukaryotic translation initiation factor 3, subunit I##AL833686|MTMR9LP|339483|myotubularin related protein 9-like, pseudogene##AK055560|MTMR9LP|339483|myotubularin related protein 9-like, pseudogene##NM_032648|FAM167B|84734|family with sequence similarity 167, member B##BC004269|FAM167B|84734|family with sequence similarity 167, member B##NM_005356|LCK|3932|lymphocyte-specific protein tyrosine kinase##AK098027|LCK|3932|lymphocyte-specific protein tyrosine kinase##X05027|LCK|3932|lymphocyte-specific protein tyrosine kinase##U23852|LCK|3932|lymphocyte-specific protein tyrosine kinase##M36881|LCK|3932|lymphocyte-specific protein tyrosine kinase##X13529|LCK|3932|lymphocyte-specific protein tyrosine kinase	0.0	
chr15	81586893	81587023	reg1043254.p1	3.529	+	NM_172217 AY324389	-69269	+	AK124725 NM_001172128 AK124565 AK131530	-97740	+	AK302120 BC062471 NM_173528 AK307565	-160331	+	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	2346	+	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	29536	-	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	79527	-	NM_172217|IL16|3603|interleukin 16##AY324389|IL16|3603|interleukin 16##AK124725|IL16|3603|interleukin 16##NM_001172128|IL16|3603|interleukin 16##AK124565|IL16|3603|interleukin 16##AK131530|IL16|3603|interleukin 16##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3	0.034459	
chr17	77389682	77389827	reg1003992.p2	3.529	+	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-318724	+	AF329840 NM_198593 BC021553	-359232	+	TSC_hg19_v1_chr17_+_77020308 AK055541	-369444	+	NM_001082575	88808	-	AY230663 BC041453 NM_178543 AY358622	315135	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	362227	+	AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF329840|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_198593|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##BC021553|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##AK055541|C1QTNF1|114897|C1q and tumor necrosis factor related protein 1##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2	0.0	
chr2	132580124	132580211	reg1034313.p1	3.529	+	BC043584 NM_214461	-20934	-	AF038169 NM_013310	-100104	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-294661	+	AK122643 NM_001508	593979	+	AY358628 BC017318 AK309849 AK075487 TSC_hg19_v1_chr2_-_133427783 AK130005 AK094501 AK123029	847536	-	NM_144586	848313	-	BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39##AY358628|LYPD1|116372|LY6/PLAUR domain containing 1##BC017318|LYPD1|116372|LY6/PLAUR domain containing 1##AK309849|LYPD1|116372|LY6/PLAUR domain containing 1##AK075487|LYPD1|116372|LY6/PLAUR domain containing 1##AK130005|LYPD1|116372|LY6/PLAUR domain containing 1##AK094501|LYPD1|116372|LY6/PLAUR domain containing 1##AK123029|LYPD1|116372|LY6/PLAUR domain containing 1##NM_144586|LYPD1|116372|LY6/PLAUR domain containing 1	0.98388	CTCF.p2:-5:0.984
chr22	50051268	50051337	reg1033535.p2	3.529	+	AK124962 TSC_hg19_v1_chr22_-_50051168 BC033837 BC048207	-169	-	AK125256 NM_015381 AK123443 AY358847	-1079141	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	-1166022	+	AF005067 NM_014577	167149	-	AK292428 TSC_hg19_v1_chr22_-_50221332 BC030007 BC047508	169964	-	TSC_hg19_v1_chr22_-_50221517 AK304776	170179	-	AK124962|C22orf34|348645|chromosome 22 open reading frame 34##BC048207|C22orf34|348645|chromosome 22 open reading frame 34##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF005067|BRD1|23774|bromodomain containing 1##NM_014577|BRD1|23774|bromodomain containing 1##AK292428|BRD1|23774|bromodomain containing 1##BC030007|BRD1|23774|bromodomain containing 1##BC047508|BRD1|23774|bromodomain containing 1##AK304776|BRD1|23774|bromodomain containing 1	0.0	
chr2	86790525	86790692	reg1038848.p1	3.529	+	TSC_hg19_v1_chr2_-_86790564 AK312353 AK315835 NM_001005753 NM_001193517 NM_016079	-32	-	AK290725 TSC_hg19_v1_chr2_-_86790532 AK025260 BC004419	-87	-	AF219226 AY364249 EU446807 AB464340 TSC_hg19_v1_chr2_-_86790480 AF151907 AK129502	-123	-	D76444 TSC_hg19_v1_chr2_-_86850957 BC035053	60338	-	TSC_hg19_v1_chr2_-_86850960 NM_001198951 NM_001198952 NM_005667	60375	-	TSC_hg19_v1_chr2_+_86947421 AK023972 NM_022780	156796	+	AK312353|CHMP3|51652|charged multivesicular body protein 3##AK315835|CHMP3|51652|charged multivesicular body protein 3##NM_001005753|CHMP3|51652|charged multivesicular body protein 3##NM_001193517|CHMP3|51652|charged multivesicular body protein 3##NM_016079|CHMP3|51652|charged multivesicular body protein 3##AK290725|CHMP3|51652|charged multivesicular body protein 3##AK025260|CHMP3|51652|charged multivesicular body protein 3##BC004419|CHMP3|51652|charged multivesicular body protein 3##AF219226|CHMP3|51652|charged multivesicular body protein 3##AY364249|CHMP3|51652|charged multivesicular body protein 3##EU446807|CHMP3|51652|charged multivesicular body protein 3##AF151907|CHMP3|51652|charged multivesicular body protein 3##AK129502|CHMP3|51652|charged multivesicular body protein 3##D76444|RNF103|7844|ring finger protein 103##BC035053|RNF103|7844|ring finger protein 103##NM_001198951|RNF103|7844|ring finger protein 103##NM_001198952|RNF103|7844|ring finger protein 103##NM_005667|RNF103|7844|ring finger protein 103##NM_022780|RMND5A|64795|required for meiotic nuclear division 5 homolog A (S. cerevisiae)	0.0	
chr4	65955585	65955652	reg1027701.p2	3.529	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	-680522	-	NM_015236	-3592780	+	TSC_hg19_v1_chr4_+_62066948 AK309793	-3888643	+	AK307826 NM_004439 NM_182472	580034	-	TSC_hg19_v1_chr4_-_66536182 AB209375	580579	-	CU688992 TSC_hg19_v1_chr4_-_68411171	2455505	-	BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_015236|LPHN3|23284|latrophilin 3##AK309793|LPHN3|23284|latrophilin 3##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##AB209375|EPHA5|2044|EPH receptor A5	0.0	
chr8	101225183	101225255	reg1035173.p1	3.529	+	TSC_hg19_v1_chr8_+_101170522 NM_003114 AF311312	-54637	+	TSC_hg19_v1_chr8_+_101170231 AK057482 NM_172218 BC055091	-54956	+	BC018157 NM_005034 TSC_hg19_v1_chr8_+_101162863 BC000806 Z47727	-62342	+	AB271913 AB271914 AB029316 NM_015435	90252	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	96962	-	TSC_hg19_v1_chr8_-_101322306 NM_183419	97066	-	NM_003114|SPAG1|6674|sperm associated antigen 1##AF311312|SPAG1|6674|sperm associated antigen 1##AK057482|SPAG1|6674|sperm associated antigen 1##NM_172218|SPAG1|6674|sperm associated antigen 1##BC055091|SPAG1|6674|sperm associated antigen 1##BC018157|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##NM_005034|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##BC000806|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##Z47727|POLR2K|5440|polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##NM_183419|RNF19A|25897|ring finger protein 19A	0.0	
chr9	127086945	127087108	reg1029797.p1	3.529	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	-32394	+	TSC_hg19_v1_chr9_+_127054267 NM_001166170 NM_001166171	-32767	+	TSC_hg19_v1_chr9_+_127020588 AL832574	-66436	+	TSC_hg19_v1_chr9_+_127119114 BC042968	32143	+	U44425 AB464089 BT007218 CR456721 AK223007 TSC_hg19_v1_chr9_-_127177719 BC000509 AK223356 BC008414 D38048 AK098757 AK303460 AK314302 GU727627 NM_002799 AK308756	90694	-	AY278562 NM_001161808	126396	+	AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166170|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166171|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BT007218|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##CR456721|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223007|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC000509|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK223356|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##BC008414|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##D38048|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK098757|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK303460|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK314302|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##GU727627|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##NM_002799|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AK308756|PSMB7|5695|proteasome (prosome, macropain) subunit, beta type, 7##AY278562|GPR144|347088|G protein-coupled receptor 144##NM_001161808|GPR144|347088|G protein-coupled receptor 144	0.0	
chr9	129767616	129767744	reg1035938.p1	3.529	+	AF221098 NM_001190728 AB385313 CU689706	-43145	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	-90576	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	-144736	+	AK075026 TSC_hg19_v1_chr9_-_129870392	102672	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	117228	-	TSC_hg19_v1_chr9_-_129884962 AK312876	117282	-	AF221098|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190728|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AK075026|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2	0.0	
chr10	101769373	101769443	reg1016795.p1	3.528	+	BC020878 TSC_hg19_v1_chr10_-_101690657 AK128576	-78705	-	TSC_hg19_v1_chr10_+_101542570 X96395 BC136419 U63970	-226845	+	TSC_hg19_v1_chr10_+_101542477 NM_000392 U49248 U66683	-226913	+	TSC_hg19_v1_chr10_-_101769671 AL833283 NM_015221	253	-	X14329 BC027897 NM_001308 AK313972	72217	-	TSC_hg19_v1_chr10_-_101945727 NM_006459 AK222480 AK298427 AK315580	176328	-	AK128576|DNMBP|23268|dynamin binding protein##X96395|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##BC136419|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U63970|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##NM_000392|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U49248|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U66683|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##AL833283|DNMBP|23268|dynamin binding protein##NM_015221|DNMBP|23268|dynamin binding protein##X14329|CPN1|1369|carboxypeptidase N, polypeptide 1##BC027897|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_001308|CPN1|1369|carboxypeptidase N, polypeptide 1##AK313972|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_006459|ERLIN1|10613|ER lipid raft associated 1##AK222480|ERLIN1|10613|ER lipid raft associated 1##AK298427|ERLIN1|10613|ER lipid raft associated 1##AK315580|ERLIN1|10613|ER lipid raft associated 1	0.0	
chr10	124895390	124895456	reg1044352.p2	3.528	+	TSC_hg19_v1_chr10_+_124768521 BC013756 U12778 AK314241 AB527625 CU680672 AL831821	-126895	+	TSC_hg19_v1_chr10_+_124768471 NM_001609 AK298638	-126975	+	CR749800 TSC_hg19_v1_chr10_-_124768312 AK226143 AK026626 NM_022466 BX647958 BC022564	-127152	-	NM_001105574 TSC_hg19_v1_chr10_+_124895620	170	+	NM_005519	12214	+	NM_001007793 NM_004725 TSC_hg19_v1_chr10_+_124913846	18382	+	BC013756|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##U12778|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK314241|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AL831821|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##NM_001609|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##AK298638|ACADSB|36|acyl-CoA dehydrogenase, short/branched chain##CR749800|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##AK226143|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##AK026626|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##NM_022466|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##BX647958|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##BC022564|IKZF5|64376|IKAROS family zinc finger 5 (Pegasus)##NM_001105574|HMX3|340784|H6 family homeobox 3##NM_005519|HMX2|3167|H6 family homeobox 2##NM_001007793|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##NM_004725|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)	0.0	
chr1	100541574	100541658	reg1035039.p2	3.528	+	TSC_hg19_v1_chr1_+_100503661 AF427492 NM_033055	-37895	+	TSC_hg19_v1_chr1_+_100503650 AK057172	-37965	+	BC005136 TSC_hg19_v1_chr1_+_100435576 AK290573	-106018	+	BX648406 BC101026 BX641109 AK302513 AY359522 BC054889 NM_194292 AK307824	56845	-	NM_019083 AK295828 BC075811 BC057226 AK002081 AK289404 AK001149 AK294738 AK298941 AB527509	57098	+	BC009613 NM_144620 AK096892 AL833417 BC022420 AY358131	102169	-	AF427492|HIAT1|64645|hippocampus abundant transcript 1##NM_033055|HIAT1|64645|hippocampus abundant transcript 1##AK057172|HIAT1|64645|hippocampus abundant transcript 1##BC005136|SLC35A3|23443|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3##AK290573|SLC35A3|23443|solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3##BX648406|SASS6|163786|spindle assembly 6 homolog (C. elegans)##BC101026|SASS6|163786|spindle assembly 6 homolog (C. elegans)##BX641109|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AK302513|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AY359522|SASS6|163786|spindle assembly 6 homolog (C. elegans)##BC054889|SASS6|163786|spindle assembly 6 homolog (C. elegans)##NM_194292|SASS6|163786|spindle assembly 6 homolog (C. elegans)##AK307824|SASS6|163786|spindle assembly 6 homolog (C. elegans)##NM_019083|CCDC76|54482|coiled-coil domain containing 76##AK295828|CCDC76|54482|coiled-coil domain containing 76##BC075811|CCDC76|54482|coiled-coil domain containing 76##BC057226|CCDC76|54482|coiled-coil domain containing 76##AK002081|CCDC76|54482|coiled-coil domain containing 76##AK289404|CCDC76|54482|coiled-coil domain containing 76##AK001149|CCDC76|54482|coiled-coil domain containing 76##AK294738|CCDC76|54482|coiled-coil domain containing 76##AK298941|CCDC76|54482|coiled-coil domain containing 76##BC009613|LRRC39|127495|leucine rich repeat containing 39##NM_144620|LRRC39|127495|leucine rich repeat containing 39##AK096892|LRRC39|127495|leucine rich repeat containing 39##AL833417|LRRC39|127495|leucine rich repeat containing 39##BC022420|LRRC39|127495|leucine rich repeat containing 39##AY358131|LRRC39|127495|leucine rich repeat containing 39	0.0	
chr11	60371452	60371624	reg1040965.p1	3.528	+	AY324188 AY324189 AY324190 NM_001012417 NM_001100909 BC140799 BC171746	-88590	+	AK000224 AK309275 NM_001164470 NM_017716 BC029793	-111282	+	NM_021950 NM_152866 AK225630 AK292168 AK300025 AK310118 BC002807 X07203 X12530	-148225	+	AF237905 NM_031457 AK310969 AK310884 AK315901 BC022895 AK308413 AF350504 AK310872	95594	+	NM_001098835 NM_152717 AK300233 BC031610 AK091846 AX747218 AY584608 AY584609	152871	+	AK122633 NM_206893 BC137259 BC137263	181307	+	AY324188|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324189|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AY324190|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001012417|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##NM_001100909|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC140799|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##BC171746|MS4A13|503497|membrane-spanning 4-domains, subfamily A, member 13##AK000224|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_001164470|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_017716|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##BC029793|MS4A12|54860|membrane-spanning 4-domains, subfamily A, member 12##NM_021950|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##NM_152866|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK225630|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK292168|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK300025|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AK310118|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##BC002807|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##X07203|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##X12530|MS4A1|931|membrane-spanning 4-domains, subfamily A, member 1##AF237905|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_031457|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310969|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310884|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK315901|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##BC022895|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK308413|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AF350504|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##AK310872|MS4A8B|83661|membrane-spanning 4-domains, subfamily A, member 8B##NM_001098835|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##NM_152717|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK300233|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##BC031610|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK091846|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584608|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AY584609|MS4A15|219995|membrane-spanning 4-domains, subfamily A, member 15##AK122633|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##NM_206893|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137259|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10##BC137263|MS4A10|341116|membrane-spanning 4-domains, subfamily A, member 10	0.0	
chr1	206736599	206736684	reg1034318.p2	3.528	+	TSC_hg19_v1_chr1_+_206730897 CU692112 EU831661	-5744	+	AL832784 AY261332 AK292039 TSC_hg19_v1_chr1_+_206730613	-6033	+	TSC_hg19_v1_chr1_+_206730542 BC042651 AY216268	-6121	+	DQ891590 DQ894784 TSC_hg19_v1_chr1_-_206785812 BC039134 BC058905 AK225259 BC001585 AF220417 AF262403 AK294536 AK001852	49114	-	TSC_hg19_v1_chr1_-_206785905 NM_001201478 NM_006893	49242	-	TSC_hg19_v1_chr1_+_206808880 AK291189 AK308082 AK313245 NM_001004023 NM_003582 BC048258 AY590695 Y12735 AF186773 BC015501	72203	+	EU831661|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AL832784|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY261332|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AK292039|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##BC042651|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##AY216268|RASSF5|83593|Ras association (RalGDS/AF-6) domain family member 5##DQ891590|EIF2D|1939|eukaryotic translation initiation factor 2D##DQ894784|EIF2D|1939|eukaryotic translation initiation factor 2D##BC039134|EIF2D|1939|eukaryotic translation initiation factor 2D##BC058905|EIF2D|1939|eukaryotic translation initiation factor 2D##AK225259|EIF2D|1939|eukaryotic translation initiation factor 2D##BC001585|EIF2D|1939|eukaryotic translation initiation factor 2D##AF220417|EIF2D|1939|eukaryotic translation initiation factor 2D##AF262403|EIF2D|1939|eukaryotic translation initiation factor 2D##AK294536|EIF2D|1939|eukaryotic translation initiation factor 2D##AK001852|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_001201478|EIF2D|1939|eukaryotic translation initiation factor 2D##NM_006893|EIF2D|1939|eukaryotic translation initiation factor 2D##AK291189|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK308082|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AK313245|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_001004023|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##NM_003582|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY590695|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##Y12735|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186773|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##BC015501|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3	0.0	
chr12	91083968	91084099	reg1039697.p1	3.528	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-980488	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-981346	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-1034182	-	BC026075 BC024183 BC027600 BC034491 NM_152638	264918	-	U59111 TSC_hg19_v1_chr12_-_91398750	314714	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	314746	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.0	
chr15	85660087	85660268	reg1039707.p2	3.528	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-134851	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-134940	+	TSC_hg19_v1_chr15_+_85523735 BC060762 AK074280 NM_001243137	-136475	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	6141	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	263714	+	AF127481 NM_144767	560090	+	BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##BC060762|PDE8A|5151|phosphodiesterase 8A##AK074280|PDE8A|5151|phosphodiesterase 8A##NM_001243137|PDE8A|5151|phosphodiesterase 8A##AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13	0.0	
chr1	67073325	67073424	reg1043718.p2	3.528	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	-73490	+	TSC_hg19_v1_chr1_+_66798096 AK294441	-275279	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	-275521	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	144750	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	144791	+	BC101646 BC101648 AF133816 AY359030 NM_005478	193561	-	AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1##BC101646|INSL5|10022|insulin-like 5##BC101648|INSL5|10022|insulin-like 5##AF133816|INSL5|10022|insulin-like 5##AY359030|INSL5|10022|insulin-like 5##NM_005478|INSL5|10022|insulin-like 5	0.891935	CTCF.p2:-12:0.892
chr17	29543173	29543255	reg1016707.p1	3.528	+	TSC_hg19_v1_chr17_+_29421994 AK289936 M82814 M89914 BC144643 D42072	-121105	+	TSC_hg19_v1_chr17_+_29421944 D12625 NM_000267 NM_001042492 NM_001128147	-121270	+	TSC_hg19_v1_chr17_+_29298062 AK226030 BC082262 AK312979 AK122646 AK122709 AB470605 AY598332	-245074	+	X51694 BC018050 AK222663 AK312445 NM_002544	81100	-	AK312822 TSC_hg19_v1_chr17_-_29641073	97857	-	TSC_hg19_v1_chr17_-_29641092 BC005926	97875	-	AK289936|NF1|4763|neurofibromin 1##M82814|NF1|4763|neurofibromin 1##M89914|NF1|4763|neurofibromin 1##BC144643|NF1|4763|neurofibromin 1##D42072|NF1|4763|neurofibromin 1##D12625|NF1|4763|neurofibromin 1##NM_000267|NF1|4763|neurofibromin 1##NM_001042492|NF1|4763|neurofibromin 1##NM_001128147|NF1|4763|neurofibromin 1##AK226030|RNF135|84282|ring finger protein 135##BC082262|RNF135|84282|ring finger protein 135##AK312979|RNF135|84282|ring finger protein 135##AK122646|RNF135|84282|ring finger protein 135##AK122709|RNF135|84282|ring finger protein 135##AB470605|RNF135|84282|ring finger protein 135##AY598332|RNF135|84282|ring finger protein 135##X51694|OMG|4974|oligodendrocyte myelin glycoprotein##BC018050|OMG|4974|oligodendrocyte myelin glycoprotein##AK222663|OMG|4974|oligodendrocyte myelin glycoprotein##AK312445|OMG|4974|oligodendrocyte myelin glycoprotein##NM_002544|OMG|4974|oligodendrocyte myelin glycoprotein##AK312822|EVI2B|2124|ecotropic viral integration site 2B##BC005926|EVI2B|2124|ecotropic viral integration site 2B	0.0	
chr17	47109930	47110110	reg1006161.p2	3.528	+	TSC_hg19_v1_chr17_+_47074830 NM_001160423 NM_006546 AF198254 AK313229	-35190	+	BC096146 BC096147 BC096148 BC096149 BC069100 BC069663 BC069686 BC069746 M18185 NM_004123	-64067	-	AB464229 CU679209 CU691602 TSC_hg19_v1_chr17_-_47022173 AF156102 BC008976 NM_007241 BC038830	-87884	-	AK302876 NM_001159388	99801	+	TSC_hg19_v1_chr17_+_47210130 NM_001159387 AJ517771	100080	+	AF510036 AJ517770 NM_153446 BC113675 BC113677 HQ258321 HQ258467	100337	+	NM_001160423|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##NM_006546|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##AF198254|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##AK313229|IGF2BP1|10642|insulin-like growth factor 2 mRNA binding protein 1##BC096146|GIP|2695|gastric inhibitory polypeptide##BC096147|GIP|2695|gastric inhibitory polypeptide##BC096148|GIP|2695|gastric inhibitory polypeptide##BC096149|GIP|2695|gastric inhibitory polypeptide##BC069100|GIP|2695|gastric inhibitory polypeptide##BC069663|GIP|2695|gastric inhibitory polypeptide##BC069686|GIP|2695|gastric inhibitory polypeptide##BC069746|GIP|2695|gastric inhibitory polypeptide##M18185|GIP|2695|gastric inhibitory polypeptide##NM_004123|GIP|2695|gastric inhibitory polypeptide##AF156102|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##BC008976|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##NM_007241|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##BC038830|SNF8|11267|SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae)##AK302876|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159388|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_001159387|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517771|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AF510036|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##AJ517770|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##NM_153446|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113675|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##BC113677|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258321|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2##HQ258467|B4GALNT2|124872|beta-1,4-N-acetyl-galactosaminyl transferase 2	0.014456	
chr19	14545098	14545195	reg1036229.p1	3.528	+	TSC_hg19_v1_chr19_+_14544325 S75546 U33053 AK313886 DQ892477	-838	+	TSC_hg19_v1_chr19_+_14544161 BC094766 NM_002741 BC040061	-991	+	TSC_hg19_v1_chr19_-_14530193 U90426 NM_005804	-14972	-	TSC_hg19_v1_chr19_+_14551079 AK123007	5919	+	TSC_hg19_v1_chr19_+_14551082 NM_213560	5936	+	TSC_hg19_v1_chr19_+_14551088 AK292130 AB527818	6011	+	S75546|PKN1|5585|protein kinase N1##U33053|PKN1|5585|protein kinase N1##AK313886|PKN1|5585|protein kinase N1##DQ892477|PKN1|5585|protein kinase N1##BC094766|PKN1|5585|protein kinase N1##NM_002741|PKN1|5585|protein kinase N1##BC040061|PKN1|5585|protein kinase N1##U90426|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##NM_005804|DDX39A|10212|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39A##AK123007|PKN1|5585|protein kinase N1##NM_213560|PKN1|5585|protein kinase N1##AK292130|PKN1|5585|protein kinase N1	0.997832	CTCF.p2:6:0.998
chr1	95699297	95699363	reg1016702.p1	3.528	+	BC063464 NM_001199691	-115852	+	TSC_hg19_v1_chr1_+_95582939 NM_152487 AK056404 BC137457 BC137458 BC139737	-116370	+	BC108263 NM_001199679	-141258	+	TSC_hg19_v1_chr1_-_95699509 AK090700	192	-	AK292699 NM_001128142 NM_001199682 NM_015485 TSC_hg19_v1_chr1_+_95699765 AK292665 AK296476 AL050062 BC125142 BC065813 BC010936 BC016307 AB528227 AM392773 AM393257 CR533493	418	+	AB055763 TSC_hg19_v1_chr1_-_97145197	1445866	-	BC063464|TMEM56-RWDD3|100527978|TMEM56-RWDD3 readthrough##NM_001199691|TMEM56-RWDD3|100527978|TMEM56-RWDD3 readthrough##NM_152487|TMEM56|148534|transmembrane protein 56##AK056404|TMEM56|148534|transmembrane protein 56##BC137457|TMEM56|148534|transmembrane protein 56##BC137458|TMEM56|148534|transmembrane protein 56##BC139737|TMEM56|148534|transmembrane protein 56##BC108263|TMEM56|148534|transmembrane protein 56##NM_001199679|TMEM56|148534|transmembrane protein 56##AK292699|RWDD3|25950|RWD domain containing 3##NM_001128142|RWDD3|25950|RWD domain containing 3##NM_001199682|RWDD3|25950|RWD domain containing 3##NM_015485|RWDD3|25950|RWD domain containing 3##AK292665|RWDD3|25950|RWD domain containing 3##AK296476|RWDD3|25950|RWD domain containing 3##AL050062|RWDD3|25950|RWD domain containing 3##BC125142|RWDD3|25950|RWD domain containing 3##BC065813|RWDD3|25950|RWD domain containing 3##BC010936|RWDD3|25950|RWD domain containing 3##BC016307|RWDD3|25950|RWD domain containing 3##AM392773|RWDD3|25950|RWD domain containing 3##AM393257|RWDD3|25950|RWD domain containing 3##CR533493|RWDD3|25950|RWD domain containing 3	0.0	
chr22	29709263	29709342	reg1031773.p1	3.528	+	TSC_hg19_v1_chr22_+_29703012 NM_006478 NM_152236 NM_152237 AK223602 AK225484 Y07846 BC011047 BC001782 BC007624 AK093386 AK122829 AX748091	-6287	+	TSC_hg19_v1_chr22_+_29664281 X66899 BC000527 AK127624 CR456490 AK225102 AK056309 BC004817 AK056681 AK225096 BC072442 AF254086 BC011048 AB463036 AF327066 CU013087 CU013375 CU679880 CU687234 EU487217	-45025	+	NM_001163285 NM_001163286 NM_001163287 NM_005243 NM_013986 TSC_hg19_v1_chr22_+_29664088	-45255	+	BC040434 TSC_hg19_v1_chr22_-_29711492 Y07847	2212	-	TSC_hg19_v1_chr22_-_29711687 BC058077 BC050739 BC022473 NM_001007279 NM_006477	2396	-	L13939 TSC_hg19_v1_chr22_-_29784436	75135	-	NM_006478|GAS2L1|10634|growth arrest-specific 2 like 1##NM_152236|GAS2L1|10634|growth arrest-specific 2 like 1##NM_152237|GAS2L1|10634|growth arrest-specific 2 like 1##AK223602|GAS2L1|10634|growth arrest-specific 2 like 1##AK225484|GAS2L1|10634|growth arrest-specific 2 like 1##Y07846|GAS2L1|10634|growth arrest-specific 2 like 1##BC011047|GAS2L1|10634|growth arrest-specific 2 like 1##BC001782|GAS2L1|10634|growth arrest-specific 2 like 1##BC007624|GAS2L1|10634|growth arrest-specific 2 like 1##AK093386|GAS2L1|10634|growth arrest-specific 2 like 1##AK122829|GAS2L1|10634|growth arrest-specific 2 like 1##X66899|EWSR1|2130|Ewing sarcoma breakpoint region 1##BC000527|EWSR1|2130|Ewing sarcoma breakpoint region 1##AK127624|EWSR1|2130|Ewing sarcoma breakpoint region 1##CR456490|EWSR1|2130|Ewing sarcoma breakpoint region 1##AK225102|EWSR1|2130|Ewing sarcoma breakpoint region 1##AK056309|EWSR1|2130|Ewing sarcoma breakpoint region 1##BC004817|EWSR1|2130|Ewing sarcoma breakpoint region 1##AK056681|EWSR1|2130|Ewing sarcoma breakpoint region 1##AK225096|EWSR1|2130|Ewing sarcoma breakpoint region 1##BC072442|EWSR1|2130|Ewing sarcoma breakpoint region 1##BC011048|EWSR1|2130|Ewing sarcoma breakpoint region 1##AF327066|EWSR1|2130|Ewing sarcoma breakpoint region 1##CU013087|EWSR1|2130|Ewing sarcoma breakpoint region 1##CU013375|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163285|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163286|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_001163287|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_005243|EWSR1|2130|Ewing sarcoma breakpoint region 1##NM_013986|EWSR1|2130|Ewing sarcoma breakpoint region 1##BC040434|RASL10A|10633|RAS-like, family 10, member A##Y07847|RASL10A|10633|RAS-like, family 10, member A##BC058077|RASL10A|10633|RAS-like, family 10, member A##BC050739|RASL10A|10633|RAS-like, family 10, member A##BC022473|RASL10A|10633|RAS-like, family 10, member A##NM_001007279|RASL10A|10633|RAS-like, family 10, member A##NM_006477|RASL10A|10633|RAS-like, family 10, member A##L13939|AP1B1|162|adaptor-related protein complex 1, beta 1 subunit	1.055289	CTCF.p2:24:0.989
chr3	149373340	149373406	reg1036737.p1	3.528	+	TSC_hg19_v1_chr3_+_149192480 AK315464 BC001386 U31449	-180884	+	NM_004617 TSC_hg19_v1_chr3_+_149192430	-180971	+	TSC_hg19_v1_chr3_-_149095520 BC034145 AK130271 NM_014220	-277831	-	AJ299431 TSC_hg19_v1_chr3_-_149375816 BC014052 NM_001168280 NM_015472	2362	-	AK022036 NM_001168278	47686	-	AY542158 CU692308 TSC_hg19_v1_chr3_-_149470246 BC046131	96866	-	AK315464|TM4SF4|7104|transmembrane 4 L six family member 4##BC001386|TM4SF4|7104|transmembrane 4 L six family member 4##U31449|TM4SF4|7104|transmembrane 4 L six family member 4##NM_004617|TM4SF4|7104|transmembrane 4 L six family member 4##BC034145|TM4SF1|4071|transmembrane 4 L six family member 1##AK130271|TM4SF1|4071|transmembrane 4 L six family member 1##NM_014220|TM4SF1|4071|transmembrane 4 L six family member 1##AJ299431|WWTR1|25937|WW domain containing transcription regulator 1##BC014052|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168280|WWTR1|25937|WW domain containing transcription regulator 1##NM_015472|WWTR1|25937|WW domain containing transcription regulator 1##AK022036|WWTR1|25937|WW domain containing transcription regulator 1##NM_001168278|WWTR1|25937|WW domain containing transcription regulator 1##AY542158|COMMD2|51122|COMM domain containing 2##BC046131|COMMD2|51122|COMM domain containing 2	0.0	
chr1	23991909	23992023	reg1029392.p2	3.527	+	NM_002167 X69111	-105682	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	-105982	-	L22846 NM_004091	-134255	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	26314	+	TSC_hg19_v1_chr1_+_24018295 BC018970	26333	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	77938	+	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11##BC018970|RPL11|6135|ribosomal protein L11##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)	0.097021	
chr15	60840429	60840610	reg1033274.p2	3.527	+	TSC_hg19_v1_chr15_-_60771277 BC020918 BC151844 BC140894 AF502591 AK055752 CR749852 AY358546 AL832046 AK095389 BX647873 NM_001018089 NM_024611	-69245	-	AB587463 BC068065 BC009564 BC021114 BC052567 BC001388 BC013843 D00017 TSC_hg19_v1_chr15_-_60690186 AK222542 BX640598 AK297923 BC015834 BC023990 BC066955 BC093056 D28364 NM_001002857 NM_001002858 NM_001136015 NM_004039 AK309956 BC016774	-150358	-	TSC_hg19_v1_chr15_+_60296509 AK314075	-543970	+	HQ692818 HQ709174 L14611 BC100987 BC100988 BC100989 BC100990 NM_134262 TSC_hg19_v1_chr15_-_60884713 AB209916	44160	-	U04899 U04898 NM_002943 NM_134260	79166	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	680905	-	BC020918|NARG2|79664|NMDA receptor regulated 2##BC151844|NARG2|79664|NMDA receptor regulated 2##BC140894|NARG2|79664|NMDA receptor regulated 2##AF502591|NARG2|79664|NMDA receptor regulated 2##AK055752|NARG2|79664|NMDA receptor regulated 2##CR749852|NARG2|79664|NMDA receptor regulated 2##AY358546|NARG2|79664|NMDA receptor regulated 2##AL832046|NARG2|79664|NMDA receptor regulated 2##AK095389|NARG2|79664|NMDA receptor regulated 2##BX647873|NARG2|79664|NMDA receptor regulated 2##NM_001018089|NARG2|79664|NMDA receptor regulated 2##NM_024611|NARG2|79664|NMDA receptor regulated 2##BC068065|ANXA2|302|annexin A2##BC009564|ANXA2|302|annexin A2##BC021114|ANXA2|302|annexin A2##BC052567|ANXA2|302|annexin A2##BC001388|ANXA2|302|annexin A2##BC013843|ANXA2|302|annexin A2##D00017|ANXA2|302|annexin A2##AK222542|ANXA2|302|annexin A2##BX640598|ANXA2|302|annexin A2##AK297923|ANXA2|302|annexin A2##BC015834|ANXA2|302|annexin A2##BC023990|ANXA2|302|annexin A2##BC066955|ANXA2|302|annexin A2##BC093056|ANXA2|302|annexin A2##D28364|ANXA2|302|annexin A2##NM_001002857|ANXA2|302|annexin A2##NM_001002858|ANXA2|302|annexin A2##NM_001136015|ANXA2|302|annexin A2##NM_004039|ANXA2|302|annexin A2##BC016774|ANXA2|302|annexin A2##AK314075|FOXB1|27023|forkhead box B1##HQ692818|RORA|6095|RAR-related orphan receptor A##HQ709174|RORA|6095|RAR-related orphan receptor A##L14611|RORA|6095|RAR-related orphan receptor A##BC100987|RORA|6095|RAR-related orphan receptor A##BC100988|RORA|6095|RAR-related orphan receptor A##BC100989|RORA|6095|RAR-related orphan receptor A##BC100990|RORA|6095|RAR-related orphan receptor A##NM_134262|RORA|6095|RAR-related orphan receptor A##U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A	0.0	
chr16	11809477	11809632	reg1042476.p1	3.527	+	TSC_hg19_v1_chr16_+_11762310 NM_003498 BC036100 BC036443 AL161976 AF030196	-47256	+	BC039840 TSC_hg19_v1_chr16_-_11680776 BC016491 BC008309 BC065293 BC107713 BC000053 AK095955 AK130788 AK314519 NM_001136472 NM_001136473	-128765	-	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	-129367	-	TSC_hg19_v1_chr16_-_11836686 AK297094 BX648407 AK027646 NM_015914 BC002856 BC018635	27102	-	BC046363 BC036857 TSC_hg19_v1_chr16_-_11891096 AK091803 AX747194	81497	-	TSC_hg19_v1_chr16_-_11891103 NM_014153	81561	-	NM_003498|SNN|8303|stannin##BC036100|SNN|8303|stannin##BC036443|SNN|8303|stannin##AL161976|SNN|8303|stannin##AF030196|SNN|8303|stannin##BC039840|LITAF|9516|lipopolysaccharide-induced TNF factor##BC016491|LITAF|9516|lipopolysaccharide-induced TNF factor##BC008309|LITAF|9516|lipopolysaccharide-induced TNF factor##BC065293|LITAF|9516|lipopolysaccharide-induced TNF factor##BC000053|LITAF|9516|lipopolysaccharide-induced TNF factor##AK095955|LITAF|9516|lipopolysaccharide-induced TNF factor##AK130788|LITAF|9516|lipopolysaccharide-induced TNF factor##AK314519|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136472|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_001136473|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor##AK297094|TXNDC11|51061|thioredoxin domain containing 11##BX648407|TXNDC11|51061|thioredoxin domain containing 11##AK027646|TXNDC11|51061|thioredoxin domain containing 11##NM_015914|TXNDC11|51061|thioredoxin domain containing 11##BC002856|TXNDC11|51061|thioredoxin domain containing 11##BC018635|TXNDC11|51061|thioredoxin domain containing 11##BC046363|ZC3H7A|29066|zinc finger CCCH-type containing 7A##BC036857|ZC3H7A|29066|zinc finger CCCH-type containing 7A##AK091803|ZC3H7A|29066|zinc finger CCCH-type containing 7A##NM_014153|ZC3H7A|29066|zinc finger CCCH-type containing 7A	0.0	
chr20	35203296	35203374	reg1034833.p1	3.527	+	NM_001199515 NM_001199535	-379	+	TSC_hg19_v1_chr20_+_35202041 AK313919 NM_021809 AB042646 BC006549 BC012816 AK074802	-1334	+	TSC_hg19_v1_chr20_+_35201854 NM_001199513 NM_001199514	-1443	+	TSC_hg19_v1_chr20_+_35234142 NM_001199534 NM_018840 NM_199483	30775	+	TSC_hg19_v1_chr20_+_35234167 AF112213	30828	+	TSC_hg19_v1_chr20_+_35234211 BC004446 BC001871 AF274936 S83364	30969	+	NM_001199515|TGIF2|60436|TGFB-induced factor homeobox 2##NM_001199535|TGIF2-C20ORF24|100527943|TGIF2-C20orf24 readthrough##AK313919|TGIF2|60436|TGFB-induced factor homeobox 2##NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2##AB042646|TGIF2|60436|TGFB-induced factor homeobox 2##BC006549|TGIF2|60436|TGFB-induced factor homeobox 2##BC012816|TGIF2|60436|TGFB-induced factor homeobox 2##AK074802|TGIF2|60436|TGFB-induced factor homeobox 2##NM_001199513|TGIF2|60436|TGFB-induced factor homeobox 2##NM_001199514|TGIF2|60436|TGFB-induced factor homeobox 2##NM_001199534|C20orf24|55969|chromosome 20 open reading frame 24##NM_018840|C20orf24|55969|chromosome 20 open reading frame 24##NM_199483|C20orf24|55969|chromosome 20 open reading frame 24##AF112213|C20orf24|55969|chromosome 20 open reading frame 24##BC004446|C20orf24|55969|chromosome 20 open reading frame 24##BC001871|C20orf24|55969|chromosome 20 open reading frame 24##AF274936|C20orf24|55969|chromosome 20 open reading frame 24##S83364|C20orf24|55969|chromosome 20 open reading frame 24	0.015398	
chr4	154409323	154409435	reg1041531.p1	3.527	+	TSC_hg19_v1_chr4_+_154387511 NM_001131007 NM_015196 AK092270 AX747443 AK308448	-21887	+	AK312172 BC032142 TSC_hg19_v1_chr4_+_154265868 AY028916	-143504	+	TSC_hg19_v1_chr4_+_154265799 NM_001253861 NM_032117	-143592	+	TSC_hg19_v1_chr4_+_154605403 AF424049 AF424050 AF424051 AF424052 AF424053	196019	+	TSC_hg19_v1_chr4_+_154605431 NM_003264	196051	+	TSC_hg19_v1_chr4_+_154605441 BC033756	196085	+	NM_001131007|KIAA0922|23240|KIAA0922##NM_015196|KIAA0922|23240|KIAA0922##AK092270|KIAA0922|23240|KIAA0922##AK308448|KIAA0922|23240|KIAA0922##AK312172|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##BC032142|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AY028916|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_001253861|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##NM_032117|MND1|84057|meiotic nuclear divisions 1 homolog (S. cerevisiae)##AF424049|TLR2|7097|toll-like receptor 2##NM_003264|TLR2|7097|toll-like receptor 2##BC033756|TLR2|7097|toll-like receptor 2	0.0	
chr4	185747619	185747744	reg1027003.p2	3.527	+	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	-447	-	TSC_hg19_v1_chr4_-_185747123 L09229 AK292798	-580	-	TSC_hg19_v1_chr4_-_185726866 AK296826	-20778	-	BC140795 BC144567 BC144568 BC144569 NM_001029887	192357	+	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	316789	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	377463	-	AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##L09229|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK292798|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##BC140795|HELT|391723|helt bHLH transcription factor##BC144567|HELT|391723|helt bHLH transcription factor##BC144569|HELT|391723|helt bHLH transcription factor##NM_001029887|HELT|391723|helt bHLH transcription factor##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430	0.10353	
chr4	26725111	26725184	reg1043743.p2	3.527	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-139467	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-233162	-	TSC_hg19_v1_chr4_+_26322667 BC053568 BC064976	-402465	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	137393	+	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3996852	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3997047	+	NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##BC053568|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC064976|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7	0.0	
chrX	111390413	111390502	reg1013475.p1	3.527	+	AK128465 NM_001004308	-64205	+	AF054568 NM_012471	-64454	-	BC034811 NM_001195577	-265333	+	BC100785 BC100786 BC100787 AY217350 NM_178175 AK289946	532882	-	AB384557 AY987378 NM_001113490	675896	-	TSC_hg19_v1_chrX_-_112084116 AF286598 NM_133265 AK301573	693605	-	AK128465|ZCCHC16|340595|zinc finger, CCHC domain containing 16##NM_001004308|ZCCHC16|340595|zinc finger, CCHC domain containing 16##AF054568|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##NM_012471|TRPC5|7224|transient receptor potential cation channel, subfamily C, member 5##BC034811|LOC100329135|100329135|uncharacterized LOC100329135##NM_001195577|LOC100329135|100329135|uncharacterized LOC100329135##BC100785|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100786|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##BC100787|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY217350|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##NM_178175|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AK289946|LHFPL1|340596|lipoma HMGIC fusion partner-like 1##AY987378|AMOT|154796|angiomotin##NM_001113490|AMOT|154796|angiomotin##AF286598|AMOT|154796|angiomotin##NM_133265|AMOT|154796|angiomotin##AK301573|AMOT|154796|angiomotin	0.0	
chrX	6657213	6657393	reg1030062.p2	3.527	+	AF167078 AF167079 NM_016379	-204145	-	AK055471 BC034018 NM_181332	-510623	-	AB033086 AF376803 AX773938 NM_020742	-511416	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	408648	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	408889	-	NM_000351 M16505 J04964 AK314034	480198	+	AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S	0.0	
chrX	74144432	74144552	reg1023981.p1	3.527	+	NM_016120 NM_183353 TSC_hg19_v1_chrX_-_73834460	-310028	-	TSC_hg19_v1_chrX_-_73834444 AK001334	-310053	-	BC002451 TSC_hg19_v1_chrX_-_73834428	-310064	-	AK307471 NM_001008537 AB095942 BC152557	807	-	TSC_hg19_v1_chrX_-_74376076 AF078777 AK307414 AF133659 BT009918 CU675349 DQ890692 EU176476 BC006323 AF038950 BX537833 AK294657 AK001418 NM_004299	231611	-	NM_145052 TSC_hg19_v1_chrX_+_74493908 AY643714 AK309951 AK056354 BC015116 CR749336 AK293024	349466	+	NM_016120|RLIM|51132|ring finger protein, LIM domain interacting##NM_183353|RLIM|51132|ring finger protein, LIM domain interacting##AK001334|RLIM|51132|ring finger protein, LIM domain interacting##AK307471|KIAA2022|340533|KIAA2022##NM_001008537|KIAA2022|340533|KIAA2022##AB095942|KIAA2022|340533|KIAA2022##BC152557|KIAA2022|340533|KIAA2022##AF078777|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK307414|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AF133659|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BT009918|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##DQ890692|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##EU176476|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BC006323|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AF038950|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##BX537833|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK294657|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##AK001418|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##NM_004299|ABCB7|22|ATP-binding cassette, sub-family B (MDR/TAP), member 7##NM_145052|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AY643714|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK309951|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK056354|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##BC015116|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##CR749336|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)##AK293024|UPRT|139596|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)	0.0	
chr10	35931577	35931676	reg1032720.p2	3.526	+	AB587328 AB043703 NM_031866	-1267	-	AK074504 NM_153368	-37289	+	TSC_hg19_v1_chr10_+_35625609 AF413522 AY504868 NM_145012 AK303283 AL834355 BC094815 BC069224 BC050310 AF465728 AF465729 AB462996 AM392857	-305832	+	AF269087 NM_052997	1483158	+	NM_001190489	1960232	-	BC132915 BC132917 BC110869 BC021819 AJ491695 AJ492196 NM_021045 TSC_hg19_v1_chr10_-_38146539	2214792	-	AB043703|FZD8|8325|frizzled family receptor 8##NM_031866|FZD8|8325|frizzled family receptor 8##AK074504|GJD4|219770|gap junction protein, delta 4, 40.1kDa##NM_153368|GJD4|219770|gap junction protein, delta 4, 40.1kDa##AF413522|CCNY|219771|cyclin Y##AY504868|CCNY|219771|cyclin Y##NM_145012|CCNY|219771|cyclin Y##AK303283|CCNY|219771|cyclin Y##AL834355|CCNY|219771|cyclin Y##BC094815|CCNY|219771|cyclin Y##BC069224|CCNY|219771|cyclin Y##BC050310|CCNY|219771|cyclin Y##AF465728|CCNY|219771|cyclin Y##AF465729|CCNY|219771|cyclin Y##AF269087|ANKRD30A|91074|ankyrin repeat domain 30A##NM_052997|ANKRD30A|91074|ankyrin repeat domain 30A##NM_001190489|MTRNR2L7|100288485|MT-RNR2-like 7##BC132915|ZNF248|57209|zinc finger protein 248##BC132917|ZNF248|57209|zinc finger protein 248##BC110869|ZNF248|57209|zinc finger protein 248##BC021819|ZNF248|57209|zinc finger protein 248##AJ491695|ZNF248|57209|zinc finger protein 248##AJ492196|ZNF248|57209|zinc finger protein 248##NM_021045|ZNF248|57209|zinc finger protein 248	0.0	
chr1	32671278	32671411	reg1031934.p2	3.526	+	NM_001160042 NM_018134 TSC_hg19_v1_chr1_+_32671269 AK223272 AK001409 AK299235 AK307853 BC098250 BC098260 BC098317 BC098366	-77	+	AK092702 NM_024296 AK225113 BC002462 BC022848	-5118	+	BC065263 TSC_hg19_v1_chr1_+_32661024	-10323	+	BC128073 NM_001099434 BC041458	3351	+	TSC_hg19_v1_chr1_-_32687936 CU691608 BC004885 NM_019118 BC001256	16539	-	TSC_hg19_v1_chr1_-_32687939 AY358586	16597	-	NM_001160042|IQCC|55721|IQ motif containing C##NM_018134|IQCC|55721|IQ motif containing C##AK223272|IQCC|55721|IQ motif containing C##AK001409|IQCC|55721|IQ motif containing C##AK299235|IQCC|55721|IQ motif containing C##AK307853|IQCC|55721|IQ motif containing C##BC098250|IQCC|55721|IQ motif containing C##BC098260|IQCC|55721|IQ motif containing C##BC098317|IQCC|55721|IQ motif containing C##BC098366|IQCC|55721|IQ motif containing C##AK092702|CCDC28B|79140|coiled-coil domain containing 28B##NM_024296|CCDC28B|79140|coiled-coil domain containing 28B##AK225113|CCDC28B|79140|coiled-coil domain containing 28B##BC002462|CCDC28B|79140|coiled-coil domain containing 28B##BC022848|CCDC28B|79140|coiled-coil domain containing 28B##BC065263|TXLNA|200081|taxilin alpha##BC128073|DCDC2B|149069|doublecortin domain containing 2B##NM_001099434|DCDC2B|149069|doublecortin domain containing 2B##BC041458|DCDC2B|149069|doublecortin domain containing 2B##BC004885|TMEM234|56063|transmembrane protein 234##NM_019118|TMEM234|56063|transmembrane protein 234##BC001256|TMEM234|56063|transmembrane protein 234##AY358586|TMEM234|56063|transmembrane protein 234	0.0	
chr13	98797406	98797472	reg1040014.p2	3.526	+	TSC_hg19_v1_chr13_+_98795717 AB008430 BC065020	-1721	+	TSC_hg19_v1_chr13_+_98795470 BC041595	-1953	+	TSC_hg19_v1_chr13_+_98795412 NM_001001715 NM_005766	-2018	+	AB464689 EU446571 AF539427 BC025388 BC017585 NM_178861	32066	-	TSC_hg19_v1_chr13_+_99058147 AF339817	260767	+	AF083420 NM_003576	376856	-	AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC041595|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##EU446571|RNF113B|140432|ring finger protein 113B##AF539427|RNF113B|140432|ring finger protein 113B##BC025388|RNF113B|140432|ring finger protein 113B##BC017585|RNF113B|140432|ring finger protein 113B##NM_178861|RNF113B|140432|ring finger protein 113B##AF083420|STK24|8428|serine/threonine kinase 24##NM_003576|STK24|8428|serine/threonine kinase 24	0.0	
chr15	53076284	53076404	reg1026827.p2	3.526	+	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	-105463	-	TSC_hg19_v1_chr15_-_52861344 BC100015 AL833077	-214967	-	TSC_hg19_v1_chr15_-_52861228 AF084555 BC003418 NM_006628	-215112	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	5850	-	AK096055 BX537884 NM_182758	975503	-	NM_001080534	1228756	+	AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##BC100015|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AL833077|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AF084555|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC003418|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##NM_006628|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72##NM_001080534|UNC13C|440279|unc-13 homolog C (C. elegans)	0.728023	CTCF.p2:-57:0.728
chr16	69373407	69373525	reg1037133.p1	3.526	+	TSC_hg19_v1_chr16_-_69373468 BC063831	-29	-	TSC_hg19_v1_chr16_-_69364492 AF322879 BC019912 AF239156 NM_022341	-8974	-	TSC_hg19_v1_chr16_+_69345258 AK315026 AF132747 AF159063 AF255952 NM_013245 BC047932 AF112215 CU690536 EU831747	-28134	+	NM_001199434 NM_016101 TSC_hg19_v1_chr16_+_69373547 AB112439	36	+	TSC_hg19_v1_chr16_-_69373478 BC121022 BC121023 AK056344 NM_032382 AK302605	39	-	TSC_hg19_v1_chr16_+_69373681 AK315355 BC015941 AF085360 AF132971 AF161528 AB062398 AB062479 AK001158 CU677525 DQ891111 DQ894291	238	+	BC063831|COG8|84342|component of oligomeric golgi complex 8##AF322879|PDF|64146|peptide deformylase (mitochondrial)##BC019912|PDF|64146|peptide deformylase (mitochondrial)##AF239156|PDF|64146|peptide deformylase (mitochondrial)##NM_022341|PDF|64146|peptide deformylase (mitochondrial)##AK315026|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF132747|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF159063|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF255952|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##NM_013245|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##BC047932|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##AF112215|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##EU831747|VPS4A|27183|vacuolar protein sorting 4 homolog A (S. cerevisiae)##NM_001199434|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)##NM_016101|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)##AB112439|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)##BC121022|COG8|84342|component of oligomeric golgi complex 8##BC121023|COG8|84342|component of oligomeric golgi complex 8##AK056344|COG8|84342|component of oligomeric golgi complex 8##NM_032382|COG8|84342|component of oligomeric golgi complex 8##AK302605|COG8|84342|component of oligomeric golgi complex 8##AK315355|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)##BC015941|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)##AF085360|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)##AF132971|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)##AF161528|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)##AB062398|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)##AB062479|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)##AK001158|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)##DQ891111|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)##DQ894291|NIP7|51388|nuclear import 7 homolog (S. cerevisiae)	0.0	
chr17	70723085	70723265	reg1005103.p1	3.526	+	AK000477 TSC_hg19_v1_chr17_-_70588944	-134232	-	TSC_hg19_v1_chr17_+_70117187 BC007951	-605935	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-606005	+	AF331643 TSC_hg19_v1_chr17_-_71088816	365641	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	365648	-	BC035631 TSC_hg19_v1_chr17_-_71088831	365656	-	AK000477|LOC100499467|100499467|uncharacterized LOC100499467##BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.0	
chr19	3360690	3360800	reg1027528.p1	3.526	+	TSC_hg19_v1_chr19_+_3359531 NM_001245005 NM_205843 X12492 AK304816 AK289885	-1289	+	BC047522 DQ891648 DQ894837 TSC_hg19_v1_chr19_+_3224751 CU690430 AF329266	-136002	+	BC028101 NM_021938 AB209067 NM_001172673 TSC_hg19_v1_chr19_+_3224705	-136041	+	TSC_hg19_v1_chr19_+_3366562 NM_001245002 NM_001245004 NM_005597 BC012120	5810	+	TSC_hg19_v1_chr19_+_3366580 AK297867 AK297825	5835	+	TSC_hg19_v1_chr19_+_3366607 X92857 AB590220 CU680224 DQ893655 DQ895795	5870	+	NM_001245005|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_205843|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X12492|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK304816|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK289885|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC047522|CELF5|60680|CUGBP, Elav-like family member 5##DQ891648|CELF5|60680|CUGBP, Elav-like family member 5##DQ894837|CELF5|60680|CUGBP, Elav-like family member 5##AF329266|CELF5|60680|CUGBP, Elav-like family member 5##BC028101|CELF5|60680|CUGBP, Elav-like family member 5##NM_021938|CELF5|60680|CUGBP, Elav-like family member 5##AB209067|CELF5|60680|CUGBP, Elav-like family member 5##NM_001172673|CELF5|60680|CUGBP, Elav-like family member 5##NM_001245002|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_001245004|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##NM_005597|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##BC012120|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297867|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##AK297825|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##X92857|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ893655|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)##DQ895795|NFIC|4782|nuclear factor I/C (CCAAT-binding transcription factor)	0.0	
chr2	111878398	111878502	reg1038806.p2	3.526	+	AK300513 NM_001142807 BC022268	-388271	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-442628	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-442807	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	37	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	763176	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	763311	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.0	
chr2	178013512	178013692	reg1015645.p1	3.526	+	BC013438 TSC_hg19_v1_chr2_-_177502718	-510914	-	NM_006554 TSC_hg19_v1_chr2_+_177134169 BC067831 AF053551 AK001287 AK289359 AK315918 BC088359 BC017271 AK303564 CU688356	-879363	+	AF241528 NM_024501 TSC_hg19_v1_chr2_+_177053395 AK314120 BC014477 BC028190 DQ892237 DQ895437 AB464583	-960186	+	NM_194247 TSC_hg19_v1_chr2_+_178077481 AK293125 AK316434 AK304687 AK303208 BX647217 BC112027 BC113470 BC064494 BC012090 AY363225	63872	+	AK311688 NM_001145412 NM_001145413	114969	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	115774	-	BC013438|LOC375295|375295|uncharacterized LOC375295##NM_006554|MTX2|10651|metaxin 2##BC067831|MTX2|10651|metaxin 2##AF053551|MTX2|10651|metaxin 2##AK001287|MTX2|10651|metaxin 2##AK289359|MTX2|10651|metaxin 2##AK315918|MTX2|10651|metaxin 2##BC088359|MTX2|10651|metaxin 2##BC017271|MTX2|10651|metaxin 2##AK303564|MTX2|10651|metaxin 2##AF241528|HOXD1|3231|homeobox D1##NM_024501|HOXD1|3231|homeobox D1##AK314120|HOXD1|3231|homeobox D1##BC014477|HOXD1|3231|homeobox D1##BC028190|HOXD1|3231|homeobox D1##DQ892237|HOXD1|3231|homeobox D1##DQ895437|HOXD1|3231|homeobox D1##NM_194247|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK293125|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK316434|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK304687|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK303208|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BX647217|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC112027|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC113470|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##BC064494|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AY363225|HNRNPA3|220988|heterogeneous nuclear ribonucleoprotein A3##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2	0.0	
chr2	233928047	233928184	reg1043673.p1	3.526	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-2999	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-3056	+	BC069151 BC107053 NM_005383	-30734	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	232151	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	232208	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	232242	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.539112	CTCF.p2:-39:0.539
chr3	129543712	129543893	reg1004785.p2	3.526	+	TSC_hg19_v1_chr3_-_129325518 NM_015103 AB014520 AY116661 BC150280	-218363	-	AY158091 NM_153833	-281746	+	NM_000539 BX537381 BC112104 BC112106 AB464154 AM392780	-296275	+	AK291448 BC039859 NM_001017395	55508	-	TSC_hg19_v1_chr3_-_129612445 NM_001128224	68616	-	TSC_hg19_v1_chr3_+_129612705 AK127796	68916	+	NM_015103|PLXND1|23129|plexin D1##AB014520|PLXND1|23129|plexin D1##AY116661|PLXND1|23129|plexin D1##BC150280|PLXND1|23129|plexin D1##AY158091|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_153833|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_000539|RHO|6010|rhodopsin##BX537381|RHO|6010|rhodopsin##BC112104|RHO|6010|rhodopsin##BC112106|RHO|6010|rhodopsin##AM392780|RHO|6010|rhodopsin##AK291448|TMCC1|23023|transmembrane and coiled-coil domain family 1##BC039859|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001017395|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001128224|TMCC1|23023|transmembrane and coiled-coil domain family 1##AK127796|LOC100507032|100507032|uncharacterized LOC100507032	0.0	
chr4	38859710	38859855	reg1036361.p2	3.526	+	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	-1354	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	-53363	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	-75183	-	TSC_hg19_v1_chr4_+_38869390 NM_138389 AK304050 AK296859 AK292831 BC040452	9609	+	BC030803 BC060512 AK026888 NM_024943	174228	-	TSC_hg19_v1_chr4_+_39046535 NM_001007075 NM_001171654 BC053860 AB208820	186656	+	AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##NM_138389|FAM114A1|92689|family with sequence similarity 114, member A1##AK304050|FAM114A1|92689|family with sequence similarity 114, member A1##AK296859|FAM114A1|92689|family with sequence similarity 114, member A1##AK292831|FAM114A1|92689|family with sequence similarity 114, member A1##BC040452|FAM114A1|92689|family with sequence similarity 114, member A1##BC030803|TMEM156|80008|transmembrane protein 156##BC060512|TMEM156|80008|transmembrane protein 156##AK026888|TMEM156|80008|transmembrane protein 156##NM_024943|TMEM156|80008|transmembrane protein 156##NM_001007075|KLHL5|51088|kelch-like 5 (Drosophila)##NM_001171654|KLHL5|51088|kelch-like 5 (Drosophila)##BC053860|KLHL5|51088|kelch-like 5 (Drosophila)##AB208820|KLHL5|51088|kelch-like 5 (Drosophila)	0.0	
chr4	73109004	73109112	reg1038589.p1	3.526	+	AK290937 NM_001144756 NM_053036 AF236083	-204188	+	AF119815 NM_004885 AK308069 AJ311393	-211489	+	AK223458 NM_001204306	-437822	-	AB002364 AB385317 BC130287 BC132735 AF247668 NM_014243	325433	-	BC101684 BC143642 TSC_hg19_v1_chr4_-_73935431 AK096310 AY957564 AY957565 BC071812 NM_173827	826385	-	TSC_hg19_v1_chr4_-_74088775 BX648035 AK300302	979721	-	AK290937|NPFFR2|10886|neuropeptide FF receptor 2##NM_001144756|NPFFR2|10886|neuropeptide FF receptor 2##NM_053036|NPFFR2|10886|neuropeptide FF receptor 2##AF236083|NPFFR2|10886|neuropeptide FF receptor 2##AF119815|NPFFR2|10886|neuropeptide FF receptor 2##NM_004885|NPFFR2|10886|neuropeptide FF receptor 2##AK308069|NPFFR2|10886|neuropeptide FF receptor 2##AJ311393|NPFFR2|10886|neuropeptide FF receptor 2##AK223458|GC|2638|group-specific component (vitamin D binding protein)##NM_001204306|GC|2638|group-specific component (vitamin D binding protein)##AB002364|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC130287|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC132735|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##AF247668|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##NM_014243|ADAMTS3|9508|ADAM metallopeptidase with thrombospondin type 1 motif, 3##BC101684|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC143642|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AK096310|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957564|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##AY957565|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BC071812|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##NM_173827|COX18|285521|COX18 cytochrome c oxidase assembly homolog (S. cerevisiae)##BX648035|ANKRD17|26057|ankyrin repeat domain 17##AK300302|ANKRD17|26057|ankyrin repeat domain 17	0.483327	CTCF.p2:29:0.483
chr5	160738482	160738633	reg1035213.p2	3.526	+	AB018258 AK295081 AK090832 AX746642 NM_025153	-459426	-	AK025130 TSC_hg19_v1_chr5_-_160112393	-626218	-	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-889654	+	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	236569	-	NM_000811	374100	+	AK289792 NM_000806 AK295160	535684	+	AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##AK025130|ATP10B|23120|ATPase, class V, type 10B##BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000811|GABRA6|2559|gamma-aminobutyric acid (GABA) A receptor, alpha 6##AK289792|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_000806|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK295160|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1	0.0	
chr5	176871331	176871397	reg1034707.p1	3.526	+	TSC_hg19_v1_chr5_+_176853676 NM_001004105 NM_001004106 NM_002082 BC009277 L16862 BC017272 AF040751 AF040752 CU677893 CU679285 AB527614	-17606	+	TSC_hg19_v1_chr5_-_176836552 AB095845 NM_000505	-34809	-	M11723 M31315 TSC_hg19_v1_chr5_-_176836522	-34859	-	BC024233 NM_001174101 NM_030567 TSC_hg19_v1_chr5_+_176873814 BC004261	2455	+	NM_001174102 BC021240	3965	+	NM_080881	28506	-	NM_001004105|GRK6|2870|G protein-coupled receptor kinase 6##NM_001004106|GRK6|2870|G protein-coupled receptor kinase 6##NM_002082|GRK6|2870|G protein-coupled receptor kinase 6##BC009277|GRK6|2870|G protein-coupled receptor kinase 6##L16862|GRK6|2870|G protein-coupled receptor kinase 6##BC017272|GRK6|2870|G protein-coupled receptor kinase 6##AF040751|GRK6|2870|G protein-coupled receptor kinase 6##AF040752|GRK6|2870|G protein-coupled receptor kinase 6##AB095845|F12|2161|coagulation factor XII (Hageman factor)##NM_000505|F12|2161|coagulation factor XII (Hageman factor)##M11723|F12|2161|coagulation factor XII (Hageman factor)##M31315|F12|2161|coagulation factor XII (Hageman factor)##BC024233|PRR7|80758|proline rich 7 (synaptic)##NM_001174101|PRR7|80758|proline rich 7 (synaptic)##NM_030567|PRR7|80758|proline rich 7 (synaptic)##BC004261|PRR7|80758|proline rich 7 (synaptic)##NM_001174102|PRR7|80758|proline rich 7 (synaptic)##BC021240|PRR7|80758|proline rich 7 (synaptic)##NM_080881|DBN1|1627|drebrin 1	0.0	
chr6	32982800	32982908	reg1013391.p2	3.526	+	AK301404 TSC_hg19_v1_chr6_-_32977369 M38056 AK290714 M31525 NM_002119	-5485	-	CU680544 DQ891048 DQ894226 AY947479 AY947480 AY947481 AY947482 BC013183 M26039 TSC_hg19_v1_chr6_-_32977339 AK310153 AK313551	-5528	-	BX647233 NM_001199456	-41994	+	X00457 AB590198 CU679537 DQ893463 DQ896324 AB209058 AK292709 TSC_hg19_v1_chr6_-_33041427 BC009956 M27487 NM_033554	58514	-	NM_002121 AK291986 AK303153 TSC_hg19_v1_chr6_+_33043767 AK301322 J03041 X01426 M83664 AK313305 BC013184 AY831401 AY831402 AY831403 AY804132 AY804142 X03067 AY804140 AY804134 AY804135 AY804137 AY804138 AY804139 AY804143 BC007963 BC015000 AB208978 AY804141 M28200 DQ284441 AY804133 AY804136 AB529034 DQ891050 DQ894229 CU680546 AY656678 AY656679 AY656680 AY831404 BT019780 GQ891549 M28202 M21886	60949	+	NM_001242524 NM_001242525	65700	-	AK301404|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##M38056|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AK290714|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##M31525|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##NM_002119|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##DQ891048|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##DQ894226|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AY947479|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AY947480|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AY947481|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AY947482|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##BC013183|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##M26039|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AK310153|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##AK313551|HLA-DOA|3111|major histocompatibility complex, class II, DO alpha##BX647233|BRD2|6046|bromodomain containing 2##NM_001199456|BRD2|6046|bromodomain containing 2##X00457|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ893463|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##DQ896324|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AB209058|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##AK292709|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##BC009956|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##M27487|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_033554|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_002121|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK291986|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK303153|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK301322|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##J03041|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X01426|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M83664|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AK313305|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC013184|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831401|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831402|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831403|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804132|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804142|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##X03067|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804140|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804134|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804135|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804137|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804138|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804139|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804143|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC007963|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BC015000|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AB208978|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804141|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M28200|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ284441|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804133|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY804136|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ891050|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##DQ894229|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656678|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656679|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY656680|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##AY831404|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##BT019780|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##GQ891549|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M28202|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##M21886|HLA-DPB1|3115|major histocompatibility complex, class II, DP beta 1##NM_001242524|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1##NM_001242525|HLA-DPA1|3113|major histocompatibility complex, class II, DP alpha 1	0.0	
chr7	128573330	128573510	reg1033023.p2	3.526	+	TSC_hg19_v1_chr7_-_128550763 AK122706 NM_001135914 NM_199349	-22654	-	TSC_hg19_v1_chr7_-_128543406 AK095464	-30019	-	NM_001195150	-66957	+	AK293654 AY693665 AY693668 NM_001098629 NM_001098630 NM_001242452 DQ995492 U51127 AK297083 AY504947 AY693666 AY693667 EU258896	4616	+	DQ995493 AY693669 BC004139 BC004201 DQ277633 NM_032643	4838	+	EU258898 NM_001098627 DQ995494 AY504946 DQ277634	7388	+	AK122706|KCP|375616|kielin/chordin-like protein##NM_001135914|KCP|375616|kielin/chordin-like protein##NM_199349|KCP|375616|kielin/chordin-like protein##AK095464|KCP|375616|kielin/chordin-like protein##NM_001195150|LOC100130705|100130705|uncharacterized LOC100130705##AK293654|IRF5|3663|interferon regulatory factor 5##AY693665|IRF5|3663|interferon regulatory factor 5##AY693668|IRF5|3663|interferon regulatory factor 5##NM_001098629|IRF5|3663|interferon regulatory factor 5##NM_001098630|IRF5|3663|interferon regulatory factor 5##NM_001242452|IRF5|3663|interferon regulatory factor 5##DQ995492|IRF5|3663|interferon regulatory factor 5##U51127|IRF5|3663|interferon regulatory factor 5##AK297083|IRF5|3663|interferon regulatory factor 5##AY504947|IRF5|3663|interferon regulatory factor 5##AY693666|IRF5|3663|interferon regulatory factor 5##AY693667|IRF5|3663|interferon regulatory factor 5##EU258896|IRF5|3663|interferon regulatory factor 5##AY693669|IRF5|3663|interferon regulatory factor 5##BC004139|IRF5|3663|interferon regulatory factor 5##BC004201|IRF5|3663|interferon regulatory factor 5##DQ277633|IRF5|3663|interferon regulatory factor 5##NM_032643|IRF5|3663|interferon regulatory factor 5##EU258898|IRF5|3663|interferon regulatory factor 5##NM_001098627|IRF5|3663|interferon regulatory factor 5##DQ995494|IRF5|3663|interferon regulatory factor 5##AY504946|IRF5|3663|interferon regulatory factor 5##DQ277634|IRF5|3663|interferon regulatory factor 5	0.0	
chr7	41174016	41174119	reg1036371.p2	3.526	+	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-999458	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-999536	+	TSC_hg19_v1_chr7_-_40174219 BC026265 NM_138701	-999936	-	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	568618	-	NM_000168	1102550	-	TSC_hg19_v1_chr7_-_42276797 AK308429	1102728	-	AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##BC026265|C7orf11|136647|chromosome 7 open reading frame 11##NM_138701|C7orf11|136647|chromosome 7 open reading frame 11##AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3	0.0	
chr7	92260723	92260803	reg1034248.p1	3.526	+	TSC_hg19_v1_chr7_-_92219705 BC079834 BC090868 BC057771 AK125498 AL833918 BC017874 NM_001040057 NM_152789 BC062706	-41065	-	TSC_hg19_v1_chr7_-_92219660 BC032461 BC157872	-41121	-	BC104865 BC104867 BC143576 NM_032120 CR933641 BC044570 AL136619 BC020919 BC033561 CR936726 AK294626 AK294812 AF161422 BC065716 CR533549	-102657	+	AB528631 CU690894 X66365 TSC_hg19_v1_chr7_-_92462894	202004	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	202457	-	AK313491 TSC_hg19_v1_chr7_-_92465884	205135	-	BC090868|FAM133B|257415|family with sequence similarity 133, member B##BC057771|FAM133B|257415|family with sequence similarity 133, member B##AK125498|FAM133B|257415|family with sequence similarity 133, member B##AL833918|FAM133B|257415|family with sequence similarity 133, member B##BC017874|FAM133B|257415|family with sequence similarity 133, member B##NM_001040057|FAM133B|257415|family with sequence similarity 133, member B##NM_152789|FAM133B|257415|family with sequence similarity 133, member B##BC062706|FAM133B|257415|family with sequence similarity 133, member B##BC032461|FAM133B|257415|family with sequence similarity 133, member B##BC157872|FAM133B|257415|family with sequence similarity 133, member B##BC104865|RBM48|84060|RNA binding motif protein 48##BC104867|RBM48|84060|RNA binding motif protein 48##BC143576|RBM48|84060|RNA binding motif protein 48##NM_032120|RBM48|84060|RNA binding motif protein 48##CR933641|RBM48|84060|RNA binding motif protein 48##BC044570|RBM48|84060|RNA binding motif protein 48##AL136619|RBM48|84060|RNA binding motif protein 48##BC020919|RBM48|84060|RNA binding motif protein 48##BC033561|RBM48|84060|RNA binding motif protein 48##CR936726|RBM48|84060|RNA binding motif protein 48##AK294626|RBM48|84060|RNA binding motif protein 48##AK294812|RBM48|84060|RNA binding motif protein 48##AF161422|RBM48|84060|RNA binding motif protein 48##BC065716|RBM48|84060|RNA binding motif protein 48##CR533549|RBM48|84060|RNA binding motif protein 48##X66365|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6	0.0	
chr7	98393790	98393902	reg1031290.p1	3.526	+	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	-147110	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-363413	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-363552	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	73684	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	73781	-	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	73830	-	NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130	0.0	
chr9	124497506	124497687	reg1021454.p2	3.526	+	TSC_hg19_v1_chr9_+_124461442 AF367051	-36090	+	NM_032552	-168198	+	AF378121 AF378122 AF378123 TSC_hg19_v1_chr9_-_124262101 BC045756	-235507	-	AY032952 NM_138709	7467	+	TSC_hg19_v1_chr9_-_124855560 AK125178	357992	-	AF521886 NM_001139442 NM_194252	358288	-	AF367051|DAB2IP|153090|DAB2 interacting protein##NM_032552|DAB2IP|153090|DAB2 interacting protein##AF378121|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378122|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AF378123|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##BC045756|GGTA1P|2681|glycoprotein, alpha-galactosyltransferase 1 pseudogene##AY032952|DAB2IP|153090|DAB2 interacting protein##NM_138709|DAB2IP|153090|DAB2 interacting protein##AK125178|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##AF521886|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_001139442|TTLL11|158135|tubulin tyrosine ligase-like family, member 11##NM_194252|TTLL11|158135|tubulin tyrosine ligase-like family, member 11	0.02172	
chr9	34139824	34139916	reg1041574.p2	3.526	+	TSC_hg19_v1_chr9_-_34126703 NM_015397	-13134	-	BC063823 TSC_hg19_v1_chr9_-_34126702 AB067479 DQ518909	-13175	-	AK000354 AK292935 TSC_hg19_v1_chr9_-_34126623	-13284	-	AK074812 AK303711 NM_001171201 NM_001171202 NM_001171203 NM_001171204 NM_016525 AK074426 TSC_hg19_v1_chr9_+_34179021	39141	+	AK074969 TSC_hg19_v1_chr9_+_34179031	39158	+	TSC_hg19_v1_chr9_+_34179039 AK074995 BC020950 AK074745 AK295482	39170	+	NM_015397|DCAF12|25853|DDB1 and CUL4 associated factor 12##BC063823|DCAF12|25853|DDB1 and CUL4 associated factor 12##AB067479|DCAF12|25853|DDB1 and CUL4 associated factor 12##DQ518909|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK000354|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK292935|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK074812|UBAP1|51271|ubiquitin associated protein 1##AK303711|UBAP1|51271|ubiquitin associated protein 1##NM_001171201|UBAP1|51271|ubiquitin associated protein 1##NM_001171202|UBAP1|51271|ubiquitin associated protein 1##NM_001171203|UBAP1|51271|ubiquitin associated protein 1##NM_001171204|UBAP1|51271|ubiquitin associated protein 1##NM_016525|UBAP1|51271|ubiquitin associated protein 1##AK074426|UBAP1|51271|ubiquitin associated protein 1##AK074969|UBAP1|51271|ubiquitin associated protein 1##AK074995|UBAP1|51271|ubiquitin associated protein 1##BC020950|UBAP1|51271|ubiquitin associated protein 1##AK074745|UBAP1|51271|ubiquitin associated protein 1##AK295482|UBAP1|51271|ubiquitin associated protein 1	0.923753	CTCF.p2:-15:0.924
chr9	66520438	66520541	reg1040253.p1	3.526	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-26293	-	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	-61993	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	-63188	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	32786	+	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	1406327	+	TSC_hg19_v1_chr9_+_68726468 AK311167	2206013	+	AB593083|LOC100132249|100132249|uncharacterized LOC100132249##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene	0.0	
chr1	203276794	203276860	reg1039322.p2	3.525	+	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	-2138	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-78012	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-120901	-	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	40557	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	43382	-	AK172740 TSC_hg19_v1_chr1_-_203320256	43434	-	NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.0	
chr12	113645993	113646174	reg1021225.p1	3.525	+	AK075358 AK123762 AK027741 TSC_hg19_v1_chr12_+_113623525 AY007158 AK027733 NM_032848 AK222908	-22610	+	BC005848 BC001132 BC001848 AY148094 TSC_hg19_v1_chr12_-_113623279 AF478457 NM_001111322 NM_024072	-22836	-	AK308987 NM_001144872	-58479	+	TSC_hg19_v1_chr12_-_113658844 BC013151 NM_138451 AK127152	12779	-	TSC_hg19_v1_chr12_+_113659268 AK093490 AX748162 NM_001143819 NM_017901 AY083666	13160	+	AB032995 BC152423 TSC_hg19_v1_chr12_+_113659278 BC136795 BC136796	13197	+	AK075358|C12orf52|84934|chromosome 12 open reading frame 52##AK123762|C12orf52|84934|chromosome 12 open reading frame 52##AK027741|C12orf52|84934|chromosome 12 open reading frame 52##AY007158|C12orf52|84934|chromosome 12 open reading frame 52##AK027733|C12orf52|84934|chromosome 12 open reading frame 52##NM_032848|C12orf52|84934|chromosome 12 open reading frame 52##AK222908|C12orf52|84934|chromosome 12 open reading frame 52##BC005848|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##BC001132|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##BC001848|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AY148094|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##AF478457|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_001111322|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_024072|DDX54|79039|DEAD (Asp-Glu-Ala-Asp) box polypeptide 54##NM_001144872|CCDC42B|387885|coiled-coil domain containing 42B##BC013151|IQCD|115811|IQ motif containing D##NM_138451|IQCD|115811|IQ motif containing D##AK127152|IQCD|115811|IQ motif containing D##AK093490|TPCN1|53373|two pore segment channel 1##NM_001143819|TPCN1|53373|two pore segment channel 1##NM_017901|TPCN1|53373|two pore segment channel 1##AY083666|TPCN1|53373|two pore segment channel 1##AB032995|TPCN1|53373|two pore segment channel 1##BC152423|TPCN1|53373|two pore segment channel 1##BC136795|TPCN1|53373|two pore segment channel 1##BC136796|TPCN1|53373|two pore segment channel 1	0.0	
chr1	25293133	25293225	reg1037256.p1	3.525	+	BC013362 AK310945 NM_001031680 AF022726	-1637	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-36393	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-36440	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	265808	-	BC065040 TSC_hg19_v1_chr1_-_25573922	280744	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	280794	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr15	83378539	83378605	reg1036188.p2	3.525	+	AK097827 TSC_hg19_v1_chr15_-_83349166	-29418	-	CU690752 BC050629 NM_030594	-61898	-	BC035348 AK023265 AK301728 AF329403 NM_001079533 NM_001079534 NM_001079535	-138037	-	AF022152 U37673 TSC_hg19_v1_chr15_-_83378628 BC093739 BC143342 BC143346 BC035640 BC008350 BC026700 AK294331 NM_004644	40	-	TSC_hg19_v1_chr15_-_83419208 BC041394	40627	-	TSC_hg19_v1_chr15_+_83419326 BX538250	40745	+	AK097827|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC050629|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_030594|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##BC035348|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK023265|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AK301728|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF329403|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079533|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079534|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##NM_001079535|CPEB1|64506|cytoplasmic polyadenylation element binding protein 1##AF022152|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##U37673|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC093739|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC143342|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC143346|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC035640|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC008350|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##BC026700|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##AK294331|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit##NM_004644|AP3B2|8120|adaptor-related protein complex 3, beta 2 subunit	0.0	
chr17	33355746	33355851	reg1029732.p1	3.525	+	TSC_hg19_v1_chr17_+_33307530 NM_002311 NM_013975 BC068005 AK300363 AK308407 U40671 X84740 BC009026	-48210	+	TSC_hg19_v1_chr17_+_33288558 AK315671 NM_052857 AK055707 AB590460 BC002913 BC011584 DQ892326 DQ895528	-67209	+	TSC_hg19_v1_chr17_-_33288480 AK302344 BC027591 NM_001193529 NM_001193530 NM_006584	-67296	-	TSC_hg19_v1_chr17_-_33390690 CR933651 NM_001017368	34919	-	TSC_hg19_v1_chr17_-_33416298 AK093112 AX747930 BC028424	60513	-	AB464124 DQ892318 DQ895520 BC002723 AB013341 AB016223 AB016224 AB016225 Y15572 AF034956 BC014422 TSC_hg19_v1_chr17_-_33446836 AK296241 BX647297 AK301249	90947	-	NM_002311|LIG3|3980|ligase III, DNA, ATP-dependent##NM_013975|LIG3|3980|ligase III, DNA, ATP-dependent##BC068005|LIG3|3980|ligase III, DNA, ATP-dependent##AK300363|LIG3|3980|ligase III, DNA, ATP-dependent##AK308407|LIG3|3980|ligase III, DNA, ATP-dependent##U40671|LIG3|3980|ligase III, DNA, ATP-dependent##X84740|LIG3|3980|ligase III, DNA, ATP-dependent##BC009026|LIG3|3980|ligase III, DNA, ATP-dependent##AK315671|ZNF830|91603|zinc finger protein 830##NM_052857|ZNF830|91603|zinc finger protein 830##AK055707|ZNF830|91603|zinc finger protein 830##BC002913|ZNF830|91603|zinc finger protein 830##BC011584|ZNF830|91603|zinc finger protein 830##DQ892326|ZNF830|91603|zinc finger protein 830##DQ895528|ZNF830|91603|zinc finger protein 830##AK302344|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##BC027591|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193529|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_001193530|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##NM_006584|CCT6B|10693|chaperonin containing TCP1, subunit 6B (zeta 2)##CR933651|RFFL|117584|ring finger and FYVE-like domain containing 1##NM_001017368|RFFL|117584|ring finger and FYVE-like domain containing 1##AK093112|RFFL|117584|ring finger and FYVE-like domain containing 1##BC028424|RFFL|117584|ring finger and FYVE-like domain containing 1##DQ892318|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##DQ895520|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC002723|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB013341|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016223|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016224|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AB016225|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##Y15572|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AF034956|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BC014422|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK296241|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##BX647297|RAD51D|5892|RAD51 homolog D (S. cerevisiae)##AK301249|RAD51D|5892|RAD51 homolog D (S. cerevisiae)	0.068808	
chr2	170254332	170254428	reg1034926.p1	3.525	+	U33837 TSC_hg19_v1_chr2_-_170219045 AK295005 NM_004525	-35301	-	AY265358 AY265357 TSC_hg19_v1_chr2_-_170218991	-35399	-	AY359046 NM_001142271	-316764	+	TSC_hg19_v1_chr2_+_170335996 AK302851 AY604003 AY604004 NM_152384 BC044593 AL834305 AK312680 AM393220 AB528077 CU692220	81625	+	AF333387 NM_006063 TSC_hg19_v1_chr2_+_170366211 AK316571 BC006534 AF056929 DQ896002 EU176397	111869	+	AL832058 AK074302 BC017950 AK055892 AK130797 BC035241 NM_024622	175987	-	U33837|LRP2|4036|low density lipoprotein receptor-related protein 2##AK295005|LRP2|4036|low density lipoprotein receptor-related protein 2##NM_004525|LRP2|4036|low density lipoprotein receptor-related protein 2##AY265358|LRP2|4036|low density lipoprotein receptor-related protein 2##AY265357|LRP2|4036|low density lipoprotein receptor-related protein 2##AY359046|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##NM_001142271|DHRS9|10170|dehydrogenase/reductase (SDR family) member 9##AY604003|BBS5|129880|Bardet-Biedl syndrome 5##AY604004|BBS5|129880|Bardet-Biedl syndrome 5##NM_152384|BBS5|129880|Bardet-Biedl syndrome 5##BC044593|BBS5|129880|Bardet-Biedl syndrome 5##AL834305|BBS5|129880|Bardet-Biedl syndrome 5##AK312680|BBS5|129880|Bardet-Biedl syndrome 5##AM393220|BBS5|129880|Bardet-Biedl syndrome 5##AF333387|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##NM_006063|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##AK316571|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##BC006534|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##AF056929|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##DQ896002|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##EU176397|KBTBD10|10324|kelch repeat and BTB (POZ) domain containing 10##AL832058|FASTKD1|79675|FAST kinase domains 1##AK074302|FASTKD1|79675|FAST kinase domains 1##BC017950|FASTKD1|79675|FAST kinase domains 1##AK055892|FASTKD1|79675|FAST kinase domains 1##AK130797|FASTKD1|79675|FAST kinase domains 1##BC035241|FASTKD1|79675|FAST kinase domains 1##NM_024622|FASTKD1|79675|FAST kinase domains 1	0.218671	CTCF.p2:22:0.219
chr22	37558556	37558648	reg1029501.p1	3.525	+	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	-12650	-	CR456446 TSC_hg19_v1_chr22_-_37505748	-52924	-	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	-59027	-	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	25689	-	BC042068 NM_001051 AK291165	49781	-	AB463213 AF498965 BT006919 CU674734 M29871 CU013155 CU013443 DQ893288 DQ896620 EU176461 TSC_hg19_v1_chr22_-_37640247 CR456555	81619	-	BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##CR456446|TMPRSS6|164656|transmembrane protease, serine 6##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3##AF498965|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##BT006919|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##M29871|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013155|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CU013443|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ893288|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##DQ896620|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##EU176461|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)##CR456555|RAC2|5880|ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2)	0.026292	
chr4	26205984	26206131	reg1035654.p1	3.525	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-290193	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-341503	-	NM_001177999 AK314514	-547967	+	L07875 BC020780 NM_005349 NM_203283	115262	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	116252	+	TSC_hg19_v1_chr4_+_26322635 AK302230	116579	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.0	
chr7	102119381	102119457	reg1033834.p2	3.525	+	DQ893151 DQ896446 TSC_hg19_v1_chr7_-_102119367 X98433 BC040116 BC024165 BC141830 BC139902 BC065711 L37127 X82385 AK290515 NM_006234	-76	-	TSC_hg19_v1_chr7_+_102105459 AB209379 CU688900	-13927	+	TSC_hg19_v1_chr7_+_102105430 AL133057 BC030547 NM_152892 AK290967 AK313771	-14011	+	AK302217 NM_001031618 NM_001166339	72259	+	AJ277739 AJ277740 AJ277741 AB384935 BC056864 BC071870 TSC_hg19_v1_chr7_-_102212997 BC044209 BC050598	93568	-	AF468111 BC110985 TSC_hg19_v1_chr7_-_102213031 AB209398 BC141857 AK309487 NM_001097615	93621	-	DQ893151|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##DQ896446|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X98433|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC040116|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC024165|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC141830|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC139902|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##BC065711|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##L37127|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##X82385|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AK290515|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##NM_006234|POLR2J|5439|polymerase (RNA) II (DNA directed) polypeptide J, 13.3kDa##AB209379|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AL133057|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##BC030547|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##NM_152892|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK290967|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK313771|LRWD1|222229|leucine-rich repeats and WD repeat domain containing 1##AK302217|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001031618|SPDYE2|441273|speedy homolog E2 (Xenopus laevis)##NM_001166339|SPDYE2L|100310812|WBSCR19-like protein 3##AJ277739|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AJ277740|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##AJ277741|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC056864|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC071870|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##BC044209|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC050598|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AF468111|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3##BC110985|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##AB209398|POLR2J2|246721|polymerase (RNA) II (DNA directed) polypeptide J2##NM_001097615|POLR2J3|548644|polymerase (RNA) II (DNA directed) polypeptide J3	0.374863	CTCF.p2:14:0.375
chr9	129916957	129917040	reg1032092.p2	3.525	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-31968	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-32036	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-32090	-	NM_032293 AK293732 AK095679	109809	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	242448	+	TSC_hg19_v1_chr9_-_130186602 AK124330	269568	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.0	
chrX	47428424	47428535	reg1039746.p1	3.525	+	NM_001654 X04790 TSC_hg19_v1_chrX_+_47420605 AB208831 AK300975 AK130043 AK297453 AK307747 BC002466 BC007514	-7912	+	BC015023 NM_007130 NM_153380	-86135	-	U28687 NM_003446 BC075003 AB528013 EU446919	-198456	+	TSC_hg19_v1_chrX_+_47441773 NM_003254 AK074854 AK296116 BC000866 BC007097	13244	+	TSC_hg19_v1_chrX_+_47441834 X03124 M12670 AK310206 AK311937 AK307222 M59906 X02598	13344	+	TSC_hg19_v1_chrX_-_47479098 AB591026	50633	-	NM_001654|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##X04790|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AB208831|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK300975|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK130043|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK297453|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##AK307747|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC002466|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC007514|ARAF|369|v-raf murine sarcoma 3611 viral oncogene homolog##BC015023|ZNF41|7592|zinc finger protein 41##NM_007130|ZNF41|7592|zinc finger protein 41##NM_153380|ZNF41|7592|zinc finger protein 41##U28687|ZNF157|7712|zinc finger protein 157##NM_003446|ZNF157|7712|zinc finger protein 157##BC075003|ZNF157|7712|zinc finger protein 157##EU446919|ZNF157|7712|zinc finger protein 157##NM_003254|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK074854|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK296116|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC000866|TIMP1|7076|TIMP metallopeptidase inhibitor 1##BC007097|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X03124|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M12670|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK310206|TIMP1|7076|TIMP metallopeptidase inhibitor 1##AK311937|TIMP1|7076|TIMP metallopeptidase inhibitor 1##M59906|TIMP1|7076|TIMP metallopeptidase inhibitor 1##X02598|TIMP1|7076|TIMP metallopeptidase inhibitor 1	0.0	
chr10	70884670	70884784	reg1034996.p1	3.524	+	BX647725 TSC_hg19_v1_chr10_+_70883987 AK290536	-727	+	TSC_hg19_v1_chr10_+_70883982 AK022992	-746	+	TSC_hg19_v1_chr10_+_70883957 AK309021	-769	+	TSC_hg19_v1_chr10_+_70940005 BC036112 NM_003171 AK290416 AK299670 AF042169 CU690300 DQ891004 DQ894183	55288	+	AK095086 NM_025130 BC110505 BC110504 TSC_hg19_v1_chr10_+_70980087 AK291024 BC069201	95354	+	NM_033497 NM_033498 NM_033500 U38226 U38227 U38228 AK128226	145030	+	BX647725|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK290536|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK022992|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK309021|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC036112|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##NM_003171|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##AK290416|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##AK299670|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##AF042169|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##DQ891004|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##DQ894183|SUPV3L1|6832|suppressor of var1, 3-like 1 (S. cerevisiae)##AK095086|HKDC1|80201|hexokinase domain containing 1##NM_025130|HKDC1|80201|hexokinase domain containing 1##BC110505|HKDC1|80201|hexokinase domain containing 1##BC110504|HKDC1|80201|hexokinase domain containing 1##AK291024|HKDC1|80201|hexokinase domain containing 1##BC069201|HKDC1|80201|hexokinase domain containing 1##NM_033497|HK1|3098|hexokinase 1##NM_033498|HK1|3098|hexokinase 1##NM_033500|HK1|3098|hexokinase 1##U38226|HK1|3098|hexokinase 1##U38227|HK1|3098|hexokinase 1##U38228|HK1|3098|hexokinase 1##AK128226|HK1|3098|hexokinase 1	0.0	
chr11	65120447	65120536	reg1042450.p1	3.524	+	TSC_hg19_v1_chr11_+_65101347 BC014889 AK291944 U94585 AB463002 BT006718 DQ892397 DQ895612	-19140	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	-19207	+	NM_006779 TSC_hg19_v1_chr11_+_65082336 AF001436 AF163840 AK315444 BC075834	-38154	+	NM_145719	1790	+	BC036869 BX648573 NM_001077241 NM_182556	29633	-	NM_031904 TSC_hg19_v1_chr11_+_65154083 BC021094	33573	+	BC014889|DPF2|5977|D4, zinc and double PHD fingers family 2##AK291944|DPF2|5977|D4, zinc and double PHD fingers family 2##U94585|DPF2|5977|D4, zinc and double PHD fingers family 2##BT006718|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ892397|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ895612|DPF2|5977|D4, zinc and double PHD fingers family 2##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2##NM_006779|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF001436|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF163840|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AK315444|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##BC075834|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##NM_145719|TIGD3|220359|tigger transposable element derived 3##BC036869|SLC25A45|283130|solute carrier family 25, member 45##BX648573|SLC25A45|283130|solute carrier family 25, member 45##NM_001077241|SLC25A45|283130|solute carrier family 25, member 45##NM_182556|SLC25A45|283130|solute carrier family 25, member 45##NM_031904|FRMD8|83786|FERM domain containing 8	0.902996	CTCF.p2:-33:0.903
chr1	246444003	246444138	reg1039615.p2	3.524	+	TSC_hg19_v1_chr1_+_245318286 AK125187 AY923834 NM_018012 AK297303 AK293964	-1125762	+	TSC_hg19_v1_chr1_+_245133706 AK302883 AK001393 BC005357	-1310387	+	TSC_hg19_v1_chr1_+_245133633 NM_001143943	-1310440	+	AK024733 NM_022743	136641	-	AB527580 CU689074 DQ892580 DQ895797 TSC_hg19_v1_chr1_-_246670577 BC031010	226484	-	TSC_hg19_v1_chr1_-_246670600 AB057595 BC107725 AK289605	226538	-	AK125187|KIF26B|55083|kinesin family member 26B##AY923834|KIF26B|55083|kinesin family member 26B##NM_018012|KIF26B|55083|kinesin family member 26B##AK297303|KIF26B|55083|kinesin family member 26B##AK293964|KIF26B|55083|kinesin family member 26B##AK302883|EFCAB2|84288|EF-hand calcium binding domain 2##AK001393|EFCAB2|84288|EF-hand calcium binding domain 2##BC005357|EFCAB2|84288|EF-hand calcium binding domain 2##NM_001143943|EFCAB2|84288|EF-hand calcium binding domain 2##AK024733|SMYD3|64754|SET and MYND domain containing 3##NM_022743|SMYD3|64754|SET and MYND domain containing 3##DQ892580|SMYD3|64754|SET and MYND domain containing 3##DQ895797|SMYD3|64754|SET and MYND domain containing 3##BC031010|SMYD3|64754|SET and MYND domain containing 3##AB057595|SMYD3|64754|SET and MYND domain containing 3##BC107725|SMYD3|64754|SET and MYND domain containing 3##AK289605|SMYD3|64754|SET and MYND domain containing 3	0.787742	CTCF.p2:0:0.788
chr12	92458984	92459128	reg1037248.p1	3.524	+	NM_001920	-882251	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-882476	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-885745	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	80587	-	AJ845165 AJ845166 NM_001025233	358678	+	AJ845168 NM_001025232	362867	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.0	
chr12	94853715	94853785	reg1036876.p1	3.524	+	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	-18	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	-108	-	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	-219	-	EU831778 EU831856 BC040535 NM_020698	190514	-	BT007220 CU675197 TSC_hg19_v1_chr12_-_95397471 AF217092 AK222619 BC005936	543720	-	TSC_hg19_v1_chr12_-_95397487 NM_018838	543766	-	BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##EU831778|TMCC3|57458|transmembrane and coiled-coil domain family 3##EU831856|TMCC3|57458|transmembrane and coiled-coil domain family 3##BC040535|TMCC3|57458|transmembrane and coiled-coil domain family 3##NM_020698|TMCC3|57458|transmembrane and coiled-coil domain family 3##BT007220|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AF217092|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##AK222619|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##BC005936|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12##NM_018838|NDUFA12|55967|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	0.0	
chr15	45480583	45480741	reg1037305.p2	3.524	+	TSC_hg19_v1_chr15_-_45480165 AK094391 AK303749	-498	-	AK290372 AF213465 NM_017434 NM_175940 AK075268 AF230495 BC114628 BC114938	-58496	+	BC029819 NM_144565 AK292771 BC020841 TSC_hg19_v1_chr15_-_45422078 AK056896	-58594	-	AK096267 NM_138356	12710	-	AK222709 NM_004212 U84392 AK291974	63779	+	TSC_hg19_v1_chr15_-_45670743 CU678590 S68805 BC004141 AK098055 AK223585 AK294995 AK298350	190077	-	AK094391|SHF|90525|Src homology 2 domain containing F##AK303749|SHF|90525|Src homology 2 domain containing F##AK290372|DUOX1|53905|dual oxidase 1##AF213465|DUOX1|53905|dual oxidase 1##NM_017434|DUOX1|53905|dual oxidase 1##NM_175940|DUOX1|53905|dual oxidase 1##AK075268|DUOX1|53905|dual oxidase 1##AF230495|DUOX1|53905|dual oxidase 1##BC114628|DUOX1|53905|dual oxidase 1##BC114938|DUOX1|53905|dual oxidase 1##BC029819|DUOXA1|90527|dual oxidase maturation factor 1##NM_144565|DUOXA1|90527|dual oxidase maturation factor 1##AK292771|DUOXA1|90527|dual oxidase maturation factor 1##BC020841|DUOXA1|90527|dual oxidase maturation factor 1##AK056896|DUOXA1|90527|dual oxidase maturation factor 1##AK096267|SHF|90525|Src homology 2 domain containing F##NM_138356|SHF|90525|Src homology 2 domain containing F##AK222709|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##NM_004212|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##U84392|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##AK291974|SLC28A2|9153|solute carrier family 28 (sodium-coupled nucleoside transporter), member 2##S68805|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##BC004141|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK098055|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK223585|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK294995|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)##AK298350|GATM|2628|glycine amidinotransferase (L-arginine:glycine amidinotransferase)	0.0	
chr15	90778358	90778424	reg1043875.p2	3.524	+	TSC_hg19_v1_chr15_+_90777469 BC127821 NM_001013657	-917	+	TSC_hg19_v1_chr15_-_90777199 NM_006384	-1157	-	TSC_hg19_v1_chr15_-_90777174 BC000846 U85611 U82226	-1226	-	TSC_hg19_v1_chr15_+_90792763 BC036668 NM_001029964 AK127965 BC052201	14384	+	TSC_hg19_v1_chr15_+_90808921 AB029315 NM_001033088 AL834503 BC007222 AL360142 AK312641 BC017192 BC019023 AF242770 AL355700 BC009389 BC096824 AF225423	30529	+	AK289385 NM_001004309 BC067279 CR749343	117132	+	BC127821|C15orf58|390637|chromosome 15 open reading frame 58##NM_001013657|C15orf58|390637|chromosome 15 open reading frame 58##NM_006384|CIB1|10519|calcium and integrin binding 1 (calmyrin)##BC000846|CIB1|10519|calcium and integrin binding 1 (calmyrin)##U85611|CIB1|10519|calcium and integrin binding 1 (calmyrin)##U82226|CIB1|10519|calcium and integrin binding 1 (calmyrin)##BC036668|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##NM_001029964|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##AK127965|TTLL13|440307|tubulin tyrosine ligase-like family, member 13##AB029315|NGRN|51335|neugrin, neurite outgrowth associated##NM_001033088|NGRN|51335|neugrin, neurite outgrowth associated##AL834503|NGRN|51335|neugrin, neurite outgrowth associated##BC007222|NGRN|51335|neugrin, neurite outgrowth associated##AL360142|NGRN|51335|neugrin, neurite outgrowth associated##AK312641|NGRN|51335|neugrin, neurite outgrowth associated##BC017192|NGRN|51335|neugrin, neurite outgrowth associated##BC019023|NGRN|51335|neugrin, neurite outgrowth associated##AF242770|NGRN|51335|neugrin, neurite outgrowth associated##AL355700|NGRN|51335|neugrin, neurite outgrowth associated##BC009389|NGRN|51335|neugrin, neurite outgrowth associated##BC096824|NGRN|51335|neugrin, neurite outgrowth associated##AF225423|NGRN|51335|neugrin, neurite outgrowth associated##AK289385|ZNF774|342132|zinc finger protein 774##NM_001004309|ZNF774|342132|zinc finger protein 774##BC067279|ZNF774|342132|zinc finger protein 774##CR749343|ZNF774|342132|zinc finger protein 774	0.0	
chr18	46304344	46304502	reg1003596.p3	3.524	+	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-238650	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-368714	-	AM988836 AK296709 NM_001039360 EF120357	-640724	-	AK131394 NM_001190823	164724	-	AK301535 NM_001190822	171279	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	172344	-	AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7	0.811266	CTCF.p2:-78:0.811
chr19	12248257	12248393	reg1012643.p1	3.524	+	AK128700 TSC_hg19_v1_chr19_+_12203111 AK124155	-45212	+	AK299732 AL832297 AK098117 NM_001136501 BC125185 BC125186 TSC_hg19_v1_chr19_+_12175767	-72685	+	NM_001080404	-84544	-	AL080125 AK023094 BC036714 TSC_hg19_v1_chr19_-_12251166 NM_001203250 NM_021143	2831	-	BC007868 AK096560 AK292455 NM_145233 TSC_hg19_v1_chr19_-_12267555	19221	-	TSC_hg19_v1_chr19_+_12273910 NM_003437 AK291242 BC006421 AK299601 U09367	25584	+	AK128700|ZNF788|388507|zinc finger family member 788##AK299732|ZNF844|284391|zinc finger protein 844##AL832297|ZNF844|284391|zinc finger protein 844##AK098117|ZNF844|284391|zinc finger protein 844##NM_001136501|ZNF844|284391|zinc finger protein 844##BC125185|ZNF844|284391|zinc finger protein 844##BC125186|ZNF844|284391|zinc finger protein 844##NM_001080404|ZNF878|729747|zinc finger protein 878##AL080125|ZNF20|7568|zinc finger protein 20##AK023094|ZNF20|7568|zinc finger protein 20##BC036714|ZNF20|7568|zinc finger protein 20##NM_001203250|ZNF20|7568|zinc finger protein 20##NM_021143|ZNF20|7568|zinc finger protein 20##BC007868|ZNF625|90589|zinc finger protein 625##AK096560|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##AK292455|ZNF625-ZNF20|100529855|ZNF625-ZNF20 readthrough##NM_145233|ZNF625|90589|zinc finger protein 625##NM_003437|ZNF136|7695|zinc finger protein 136##AK291242|ZNF136|7695|zinc finger protein 136##BC006421|ZNF136|7695|zinc finger protein 136##AK299601|ZNF136|7695|zinc finger protein 136##U09367|ZNF136|7695|zinc finger protein 136	0.211672	CTCF.p2:-86:0.212
chr22	47170113	47170192	reg1037650.p2	3.524	+	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	-11552	+	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	-35997	-	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	-36073	-	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	857351	+	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	1715128	+	AK125256 NM_015381 AK123443 AY358847	1802009	+	NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##AK093107|LOC284930|284930|uncharacterized LOC284930##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5	0.049161	
chr3	195277163	195277269	reg1045859.p1	3.524	+	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	-7103	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	-113514	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	-285366	-	TSC_hg19_v1_chr3_-_195306274 BT019860 BT019861 CR456838 CR541773 CU675645 DQ892668 DQ896124	29086	-	J02611 BC007402 TSC_hg19_v1_chr3_-_195310812 AK312090 AK294523	33614	-	TSC_hg19_v1_chr3_-_195310989 NM_001647	33814	-	BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##BT019860|APOD|347|apolipoprotein D##BT019861|APOD|347|apolipoprotein D##CR456838|APOD|347|apolipoprotein D##CR541773|APOD|347|apolipoprotein D##DQ892668|APOD|347|apolipoprotein D##DQ896124|APOD|347|apolipoprotein D##J02611|APOD|347|apolipoprotein D##BC007402|APOD|347|apolipoprotein D##AK312090|APOD|347|apolipoprotein D##AK294523|APOD|347|apolipoprotein D##NM_001647|APOD|347|apolipoprotein D	0.0	
chr7	32246758	32246847	reg1037770.p1	3.524	+	AK094180 NM_001191059 U40371 NM_005020	-135791	-	AK056170 NM_001191056 NM_001191057 BC022479 BC022525 TSC_hg19_v1_chr7_-_32110551	-136297	-	NM_001145123 NM_006658	-520172	+	NM_001191058	91580	-	TSC_hg19_v1_chr7_-_32529998 AJ238097 AF182291 CU675199 AB463843 BC005938 AK022772 AK024217 NM_012322	283195	-	NM_001130710 NM_001139499	288067	-	AK094180|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191059|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##U40371|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_005020|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AK056170|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191056|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001191057|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022479|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##BC022525|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##NM_001145123|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_006658|PPP1R17|10842|protein phosphatase 1, regulatory subunit 17##NM_001191058|PDE1C|5137|phosphodiesterase 1C, calmodulin-dependent 70kDa##AJ238097|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AF182291|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##BC005938|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK022772|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##AK024217|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_012322|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001130710|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)##NM_001139499|LSM5|23658|LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)	0.24926	CTCF.p2:13:0.225
chr9	16179698	16179828	reg1039838.p1	3.524	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-626742	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-668803	-	AF098483 AF098482 NM_021144	-669516	-	TSC_hg19_v1_chr9_-_16727889 AY438376	548134	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	690904	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	691003	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.0	
chr10	15287717	15287792	reg1037833.p1	3.523	+	BT007024 CU675371 DQ890667 DQ893848 BC006376 AK315085 AK094904 AF043325 TSC_hg19_v1_chr10_-_15210693 NM_004808	-77093	-	BC157831 BC171823 TSC_hg19_v1_chr10_-_15197364	-90399	-	TSC_hg19_v1_chr10_+_15139363 AK057006 U77664 BC029494	-148391	+	AL050367 BC109302 BC109303 NM_001010924 AY683003 TSC_hg19_v1_chr10_-_15413235	125395	-	L36531 AB587331 NM_003638 AK297740 AK308240 TSC_hg19_v1_chr10_-_15761922	474039	-	BC061585 TSC_hg19_v1_chr10_-_15902498 AF176916 AL833873 BC020605 BC067799 AK023459 NM_024948	614737	-	BT007024|NMT2|9397|N-myristoyltransferase 2##DQ890667|NMT2|9397|N-myristoyltransferase 2##DQ893848|NMT2|9397|N-myristoyltransferase 2##BC006376|NMT2|9397|N-myristoyltransferase 2##AK315085|NMT2|9397|N-myristoyltransferase 2##AK094904|NMT2|9397|N-myristoyltransferase 2##AF043325|NMT2|9397|N-myristoyltransferase 2##NM_004808|NMT2|9397|N-myristoyltransferase 2##BC157831|LOC100192204|100192204|peptidylprolyl isomerase A (cyclophilin A) pseudogene##AK057006|RPP38|10557|ribonuclease P/MRP 38kDa subunit##U77664|RPP38|10557|ribonuclease P/MRP 38kDa subunit##BC029494|RPP38|10557|ribonuclease P/MRP 38kDa subunit##AL050367|FAM171A1|221061|family with sequence similarity 171, member A1##BC109302|FAM171A1|221061|family with sequence similarity 171, member A1##BC109303|FAM171A1|221061|family with sequence similarity 171, member A1##NM_001010924|FAM171A1|221061|family with sequence similarity 171, member A1##AY683003|FAM171A1|221061|family with sequence similarity 171, member A1##L36531|ITGA8|8516|integrin, alpha 8##NM_003638|ITGA8|8516|integrin, alpha 8##AK297740|ITGA8|8516|integrin, alpha 8##AK308240|ITGA8|8516|integrin, alpha 8##BC061585|FAM188A|80013|family with sequence similarity 188, member A##AF176916|FAM188A|80013|family with sequence similarity 188, member A##AL833873|FAM188A|80013|family with sequence similarity 188, member A##BC020605|FAM188A|80013|family with sequence similarity 188, member A##BC067799|FAM188A|80013|family with sequence similarity 188, member A##AK023459|FAM188A|80013|family with sequence similarity 188, member A##NM_024948|FAM188A|80013|family with sequence similarity 188, member A	0.82034	CTCF.p2:-102:0.820
chr11	126570873	126570963	reg1030993.p2	3.523	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	-294920	+	NM_006278 X74570	-344823	+	TSC_hg19_v1_chr11_-_126225452 AK096370	-345455	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	299742	-	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	299807	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	302387	+	AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK096370|FLJ39051|399972|uncharacterized LOC399972##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)	0.0	
chr12	48357365	48357545	reg1015975.p2	3.523	+	TSC_hg19_v1_chr12_+_48357387 AK310035 AK313698 AK299154 BC107792	-35	+	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	-117	+	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	-58654	-	NM_001844 NM_033150 TSC_hg19_v1_chr12_-_48398292	40833	-	TSC_hg19_v1_chr12_-_48499809 BC045639 BX640784 NM_014554 BX537920	142171	-	NM_001166686 AK126229	142225	+	AK310035|TMEM106C|79022|transmembrane protein 106C##AK313698|TMEM106C|79022|transmembrane protein 106C##AK299154|TMEM106C|79022|transmembrane protein 106C##BC107792|TMEM106C|79022|transmembrane protein 106C##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001844|COL2A1|1280|collagen, type II, alpha 1##NM_033150|COL2A1|1280|collagen, type II, alpha 1##BC045639|SENP1|29843|SUMO1/sentrin specific peptidase 1##BX640784|SENP1|29843|SUMO1/sentrin specific peptidase 1##NM_014554|SENP1|29843|SUMO1/sentrin specific peptidase 1##BX537920|SENP1|29843|SUMO1/sentrin specific peptidase 1##NM_001166686|PFKM|5213|phosphofructokinase, muscle##AK126229|PFKM|5213|phosphofructokinase, muscle	0.0	
chr12	96850502	96850683	reg1046540.p1	3.523	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-56275	-	X66360 TSC_hg19_v1_chr12_-_96794129 BC033005 AK294698	-56609	-	TSC_hg19_v1_chr12_+_96588254 BC017371	-262325	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	450439	+	BC027605 NM_001135175	450651	+	TSC_hg19_v1_chr12_-_98897622 AK126817	2047035	-	AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##X66360|CDK17|5128|cyclin-dependent kinase 17##BC033005|CDK17|5128|cyclin-dependent kinase 17##AK294698|CDK17|5128|cyclin-dependent kinase 17##BC017371|ELK3|2004|ELK3, ETS-domain protein (SRF accessory protein 2)##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK126817|LOC643770|643770|uncharacterized LOC643770	0.0	
chr14	68085622	68085801	reg1006805.p2	3.523	+	BT006804 CU678574 BC071849 BC004100 L19783 AK314108 AK293584 NM_004569	-18744	-	AK307428 NM_020715 TSC_hg19_v1_chr14_+_68000028 AB033026 BC146787	-85738	+	NM_182526 TSC_hg19_v1_chr14_-_67982162 AK090706 AX746582	-103601	-	TSC_hg19_v1_chr14_+_68086582 BC029050 NM_001172	878	+	AY074489 BC008464 TSC_hg19_v1_chr14_+_68086636	925	+	U75667 AK312484 TSC_hg19_v1_chr14_+_68086666 D86724 BC001350 U82256 AB587380 CR536550	963	+	BT006804|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC071849|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##BC004100|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##L19783|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##AK314108|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##NM_004569|PIGH|5283|phosphatidylinositol glycan anchor biosynthesis, class H##AK307428|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##NM_020715|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##AB033026|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##BC146787|PLEKHH1|57475|pleckstrin homology domain containing, family H (with MyTH4 domain) member 1##NM_182526|TMEM229B|161145|transmembrane protein 229B##AK090706|TMEM229B|161145|transmembrane protein 229B##BC029050|ARG2|384|arginase, type II##NM_001172|ARG2|384|arginase, type II##AY074489|ARG2|384|arginase, type II##BC008464|ARG2|384|arginase, type II##U75667|ARG2|384|arginase, type II##AK312484|ARG2|384|arginase, type II##D86724|ARG2|384|arginase, type II##BC001350|ARG2|384|arginase, type II##U82256|ARG2|384|arginase, type II##CR536550|ARG2|384|arginase, type II	0.0	
chr16	17120894	17120983	reg1026075.p2	3.523	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-794408	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-794450	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-794456	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	443867	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1452453	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1677158	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr16	21552096	21552194	reg1039601.p1	3.523	+	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	-20393	-	BC036263 NM_130464	-115488	-	BX648477 NM_001014444 NM_001888	-237758	-	TSC_hg19_v1_chr16_+_21610912 NM_001077180 NM_016025 AJ278577 AJ278578 AK074529 BC000195 AK313077 AK075022 AK075237	58745	+	AF151839 TSC_hg19_v1_chr16_+_21611174	59009	+	TSC_hg19_v1_chr16_-_21663930 DQ892013 DQ895202 EU176227 EU176324 AK313860 AK223286 AK290910 AK293703 BC017844	111775	-	BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BX648477|CRYM|1428|crystallin, mu##NM_001014444|CRYM|1428|crystallin, mu##NM_001888|CRYM|1428|crystallin, mu##NM_001077180|METTL9|51108|methyltransferase like 9##NM_016025|METTL9|51108|methyltransferase like 9##AJ278577|METTL9|51108|methyltransferase like 9##AJ278578|METTL9|51108|methyltransferase like 9##AK074529|METTL9|51108|methyltransferase like 9##BC000195|METTL9|51108|methyltransferase like 9##AK313077|METTL9|51108|methyltransferase like 9##AK075022|METTL9|51108|methyltransferase like 9##AK075237|METTL9|51108|methyltransferase like 9##AF151839|METTL9|51108|methyltransferase like 9##DQ892013|IGSF6|10261|immunoglobulin superfamily, member 6##DQ895202|IGSF6|10261|immunoglobulin superfamily, member 6##EU176227|IGSF6|10261|immunoglobulin superfamily, member 6##EU176324|IGSF6|10261|immunoglobulin superfamily, member 6##AK313860|IGSF6|10261|immunoglobulin superfamily, member 6##AK223286|IGSF6|10261|immunoglobulin superfamily, member 6##AK290910|IGSF6|10261|immunoglobulin superfamily, member 6##AK293703|IGSF6|10261|immunoglobulin superfamily, member 6##BC017844|IGSF6|10261|immunoglobulin superfamily, member 6	0.0	
chr16	64781510	64781593	reg1035155.p2	3.523	+	AK124734 NM_001796	-2710813	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-6013354	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-6062895	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	374351	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	374417	-	TSC_hg19_v1_chr16_-_65155987 AK297377	374443	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.0	
chr16	69554841	69554983	reg1045999.p1	3.523	+	BC004373 AK291576 TSC_hg19_v1_chr16_+_69458565	-96348	+	TSC_hg19_v1_chr16_+_69458522 AB009282 NM_030579 BX647922 BC014431	-96396	+	TSC_hg19_v1_chr16_-_69419884 AF002999 BC024890 NM_005652	-135052	-	NM_001113178 NM_006599 NM_138713 NM_138714 NM_173214 NM_173215 TSC_hg19_v1_chr16_+_69599868	44956	+	TSC_hg19_v1_chr16_+_69599907 AB020634 BC146765 AF089824 BC089395 BC131509	45004	+	AJ243298 AJ243299 TSC_hg19_v1_chr16_+_69600112 AJ005683 AJ005684	45269	+	BC004373|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##AK291576|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##AB009282|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##NM_030579|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##BX647922|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##BC014431|CYB5B|80777|cytochrome b5 type B (outer mitochondrial membrane)##AF002999|TERF2|7014|telomeric repeat binding factor 2##BC024890|TERF2|7014|telomeric repeat binding factor 2##NM_005652|TERF2|7014|telomeric repeat binding factor 2##NM_001113178|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_006599|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_138713|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_138714|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_173214|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##NM_173215|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AB020634|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##BC146765|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AF089824|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##BC089395|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##BC131509|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ243298|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ243299|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ005683|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive##AJ005684|NFAT5|10725|nuclear factor of activated T-cells 5, tonicity-responsive	0.0	
chr19	13950067	13950134	reg1039133.p1	3.523	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	-2998	-	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-43855	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-64816	+	BC101209 BC101210 NM_001098622	37962	+	AK097431 NM_024323	66808	-	NM_017721 TSC_hg19_v1_chr19_+_14017006	66880	+	AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57##NM_017721|CC2D1A|54862|coiled-coil and C2 domain containing 1A	0.0	
chr1	91968568	91968661	reg1040184.p1	3.523	+	TSC_hg19_v1_chr1_+_91966668 NM_001134420 AK312726	-1933	+	TSC_hg19_v1_chr1_+_91966424 NM_001134419 NM_003503 AK298963 BC111044 AB209337 AF015592 BC110526 BC110527 AB003698	-2195	+	TSC_hg19_v1_chr1_-_91870367 AB058637 AK294754 AK302582 AB058636 AB204867 NM_001017975	-98242	-	AK291345 BC126116 BC136295 BC143869 TSC_hg19_v1_chr1_-_92351559	382903	-	AK225799 TSC_hg19_v1_chr1_-_92351709 NM_001195683 NM_003243	383133	-	L07594 NM_001195684	402944	-	NM_001134420|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK312726|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_001134419|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##NM_003503|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AK298963|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC111044|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB209337|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AF015592|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110526|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##BC110527|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB003698|CDC7|8317|cell division cycle 7 homolog (S. cerevisiae)##AB058637|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK294754|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK302582|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB058636|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AB204867|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##NM_001017975|HFM1|164045|HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)##AK291345|TGFBR3|7049|transforming growth factor, beta receptor III##BC126116|TGFBR3|7049|transforming growth factor, beta receptor III##BC136295|TGFBR3|7049|transforming growth factor, beta receptor III##BC143869|TGFBR3|7049|transforming growth factor, beta receptor III##AK225799|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195683|TGFBR3|7049|transforming growth factor, beta receptor III##NM_003243|TGFBR3|7049|transforming growth factor, beta receptor III##L07594|TGFBR3|7049|transforming growth factor, beta receptor III##NM_001195684|TGFBR3|7049|transforming growth factor, beta receptor III	0.0	
chr19	40192014	40192146	reg1032852.p1	3.523	+	FJ613352 NM_001190441	-45535	+	BC066304 AY055826 BC069312 NM_013268 FJ613336 FJ613337 FJ613338 AF117383 CU686743	-98895	+	TSC_hg19_v1_chr19_-_40030800 AY251272 BC030137 AK128468 NM_153232	-161260	-	AF267852 AF367430 AF367431 AF367432 NM_020129 NM_203471 BC022257 AK312040 FJ613341 FJ613342	2963	+	FJ613334 BC119711 BC119712 FJ613335 L01664 NM_001828	36559	-	NM_001143832	75153	+	FJ613352|LGALS16|148003|lectin, galactoside-binding, soluble, 16##NM_001190441|LGALS16|148003|lectin, galactoside-binding, soluble, 16##BC066304|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY055826|LGALS13|29124|lectin, galactoside-binding, soluble, 13##BC069312|LGALS13|29124|lectin, galactoside-binding, soluble, 13##NM_013268|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613336|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613337|LGALS13|29124|lectin, galactoside-binding, soluble, 13##FJ613338|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AF117383|LGALS13|29124|lectin, galactoside-binding, soluble, 13##AY251272|EID2|163126|EP300 interacting inhibitor of differentiation 2##BC030137|EID2|163126|EP300 interacting inhibitor of differentiation 2##AK128468|EID2|163126|EP300 interacting inhibitor of differentiation 2##NM_153232|EID2|163126|EP300 interacting inhibitor of differentiation 2##AF267852|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367430|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367431|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AF367432|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_020129|LGALS14|56891|lectin, galactoside-binding, soluble, 14##NM_203471|LGALS14|56891|lectin, galactoside-binding, soluble, 14##BC022257|LGALS14|56891|lectin, galactoside-binding, soluble, 14##AK312040|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613341|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613342|LGALS14|56891|lectin, galactoside-binding, soluble, 14##FJ613334|CLC|1178|Charcot-Leyden crystal protein##BC119711|CLC|1178|Charcot-Leyden crystal protein##BC119712|CLC|1178|Charcot-Leyden crystal protein##FJ613335|CLC|1178|Charcot-Leyden crystal protein##L01664|CLC|1178|Charcot-Leyden crystal protein##NM_001828|CLC|1178|Charcot-Leyden crystal protein##NM_001143832|LEUTX|342900|leucine twenty homeobox	0.0	
chr2	191544849	191545029	reg1006763.p1	3.523	+	TSC_hg19_v1_chr2_+_191513840 NM_005966 BC035724 AK292446	-30973	+	TSC_hg19_v1_chr2_-_191399454 NM_001142645	-145473	-	AK296987 TSC_hg19_v1_chr2_-_191399436	-145512	-	AK289747 NM_014905 TSC_hg19_v1_chr2_+_191745546	200607	+	TSC_hg19_v1_chr2_+_191745547 BC038507 AB020645 AF158555	200618	+	TSC_hg19_v1_chr2_+_191745568 AF097495 Y08264 AF327434	200645	+	NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##NM_001142645|TMEM194B|100131211|transmembrane protein 194B##AK296987|TMEM194B|100131211|transmembrane protein 194B##AK289747|GLS|2744|glutaminase##NM_014905|GLS|2744|glutaminase##BC038507|GLS|2744|glutaminase##AB020645|GLS|2744|glutaminase##AF158555|GLS|2744|glutaminase##AF097495|GLS|2744|glutaminase##Y08264|GLS|2744|glutaminase##AF327434|GLS|2744|glutaminase	0.0	
chr6	15299876	15300027	reg1032766.p1	3.523	+	TSC_hg19_v1_chr6_+_15249113 AK303610	-50838	+	BC033996 TSC_hg19_v1_chr6_-_15248900	-51050	-	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	-53539	+	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	363226	-	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	363339	-	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	829351	+	AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein	0.0	
chr6	157009675	157009742	reg1034521.p2	3.523	+	AF190122 NM_015718	-1232672	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1374085	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1374123	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	89355	+	TSC_hg19_v1_chr6_+_157099206 AB587572	89517	+	TSC_hg19_v1_chr6_+_157099283 AF521671	89576	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.0	
chr6	3746444	3746532	reg1042191.p2	3.523	+	TSC_hg19_v1_chr6_-_3720312 BC031944	-26178	-	BC040876 NM_015482	-289725	-	TSC_hg19_v1_chr6_-_3456513 AL110245	-289974	-	NM_183373 TSC_hg19_v1_chr6_-_3752248	5758	-	BC001261 NM_012135 Y18503	103138	+	TSC_hg19_v1_chr6_+_4021647 BC034969 NM_003913 AK291244 AB011108 AF283465 AB385345 AY029347	275101	+	BC040876|SLC22A23|63027|solute carrier family 22, member 23##NM_015482|SLC22A23|63027|solute carrier family 22, member 23##AL110245|SLC22A23|63027|solute carrier family 22, member 23##NM_183373|PXDC1|221749|PX domain containing 1##BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B##BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)	0.0	
chr7	55661194	55661359	reg1007422.p1	3.523	+	TSC_hg19_v1_chr7_-_55640198 NM_030796	-21066	-	TSC_hg19_v1_chr7_-_55640196 AK075391 AK225755	-21113	-	BC016650 AK314338 TSC_hg19_v1_chr7_-_55640107	-21171	-	AK301928 NM_207366	269186	-	TSC_hg19_v1_chr7_+_55955148 BC094796 BC048108	293893	+	AK097282 NM_182633 AB464411	319072	+	NM_030796|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK075391|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK225755|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##BC016650|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK314338|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AK301928|SEPT14|346288|septin 14##NM_207366|SEPT14|346288|septin 14##BC094796|ZNF713|349075|zinc finger protein 713##AK097282|ZNF713|349075|zinc finger protein 713##NM_182633|ZNF713|349075|zinc finger protein 713	0.016131	
chr8	119677876	119678007	reg1041276.p1	3.523	+	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	-43734	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	-43816	-	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	-553980	-	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	286279	-	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	401528	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	542698	+	NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)	0.0	
chr8	136722884	136723065	reg1041032.p2	3.523	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-252773	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-253316	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-997700	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2786132	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	3203270	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3992308	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.0	
chr10	112038994	112039175	reg1003290.p1	3.522	+	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-53263	+	BC012907 NM_001008541	-69096	+	TSC_hg19_v1_chr10_+_111967381 BC035128 NM_130439	-71725	+	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	25509	-	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	25616	-	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	218667	+	AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##BC012907|MXI1|4601|MAX interactor 1##NM_001008541|MXI1|4601|MAX interactor 1##BC035128|MXI1|4601|MAX interactor 1##NM_130439|MXI1|4601|MAX interactor 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5	0.0	
chr10	7729535	7729655	reg1004113.p2	3.522	+	AL833203 AY238437 AB384652 TSC_hg19_v1_chr10_-_7708928 AK027375 BC142961 AY358426 AK075381 BC136439 NM_001001851 NM_030569	-20696	-	AK027831 AB075833 TSC_hg19_v1_chr10_-_7682819	-46815	-	BC004282 NM_032817	-67971	-	TSC_hg19_v1_chr10_+_7745278 NM_002216	15660	+	TSC_hg19_v1_chr10_+_7745319 AK291379	15707	+	TSC_hg19_v1_chr10_+_7745330 AK225329 AK297334 X07173	15737	+	AL833203|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AY238437|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK027375|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC142961|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AY358426|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK075381|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC136439|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_001001851|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_030569|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AK027831|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##AB075833|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##BC004282|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_032817|ITIH5|80760|inter-alpha-trypsin inhibitor heavy chain family, member 5##NM_002216|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##AK291379|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##AK225329|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##AK297334|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2##X07173|ITIH2|3698|inter-alpha-trypsin inhibitor heavy chain 2	0.0	
chr1	192514229	192514382	reg1030226.p1	3.522	+	AY643711 NM_001039152	-228184	+	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	-386702	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	-2067570	-	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	30603	+	NM_002927 NM_144766 AF030107 BC016667	90979	+	BC042755 BC044742 NM_002923 TSC_hg19_v1_chr1_+_192778168 AK313668 BC007049 L13463 AY971351 AB528517 AF493926 BT007065 CR457410 CU675517 DQ893178 DQ896478	263879	+	AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1##NM_002927|RGS13|6003|regulator of G-protein signaling 13##NM_144766|RGS13|6003|regulator of G-protein signaling 13##AF030107|RGS13|6003|regulator of G-protein signaling 13##BC016667|RGS13|6003|regulator of G-protein signaling 13##BC042755|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC044742|RGS2|5997|regulator of G-protein signaling 2, 24kDa##NM_002923|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AK313668|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BC007049|RGS2|5997|regulator of G-protein signaling 2, 24kDa##L13463|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AY971351|RGS2|5997|regulator of G-protein signaling 2, 24kDa##AF493926|RGS2|5997|regulator of G-protein signaling 2, 24kDa##BT007065|RGS2|5997|regulator of G-protein signaling 2, 24kDa##CR457410|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ893178|RGS2|5997|regulator of G-protein signaling 2, 24kDa##DQ896478|RGS2|5997|regulator of G-protein signaling 2, 24kDa	0.0	
chr14	96531323	96531409	reg1031045.p2	3.522	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	-25720	+	AK023027 TSC_hg19_v1_chr14_+_96342762	-188621	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-350899	-	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	139711	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	139830	+	AK291970 AK309528 NM_000710 TSC_hg19_v1_chr14_+_96722546 U30271 AJ238044	191188	+	NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##AK023027|LOC100507043|100507043|uncharacterized LOC100507043##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2##AK291970|BDKRB1|623|bradykinin receptor B1##AK309528|BDKRB1|623|bradykinin receptor B1##NM_000710|BDKRB1|623|bradykinin receptor B1##U30271|BDKRB1|623|bradykinin receptor B1##AJ238044|BDKRB1|623|bradykinin receptor B1	0.0	
chr15	42787595	42787724	reg1034651.p1	3.522	+	AK290152 AK315279 NM_003825 NM_130798	-179	+	TSC_hg19_v1_chr15_-_42783322 AK226132 BX649141 AK302735	-4335	-	AL831983 BC029366 BC070244 AF205632 BC058023 BC111396 NM_022473 TSC_hg19_v1_chr15_-_42749731 AK294529 AK091929 AX747260	-37922	-	U55936 TSC_hg19_v1_chr15_+_42787875 BC022890 BC003686 AK313161 BC000148 AJ011915	208	+	BX538324 TSC_hg19_v1_chr15_-_42840973 BC051262 BC058935 AK094131 CR749223 AK309861	53291	-	TSC_hg19_v1_chr15_-_42840992 AK094891 NM_153260	53345	-	AK290152|SNAP23|8773|synaptosomal-associated protein, 23kDa##AK315279|SNAP23|8773|synaptosomal-associated protein, 23kDa##NM_003825|SNAP23|8773|synaptosomal-associated protein, 23kDa##NM_130798|SNAP23|8773|synaptosomal-associated protein, 23kDa##AK226132|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AK302735|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AL831983|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC029366|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC070244|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AF205632|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC058023|ZFP106|64397|zinc finger protein 106 homolog (mouse)##BC111396|ZFP106|64397|zinc finger protein 106 homolog (mouse)##NM_022473|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AK294529|ZFP106|64397|zinc finger protein 106 homolog (mouse)##AK091929|ZFP106|64397|zinc finger protein 106 homolog (mouse)##U55936|SNAP23|8773|synaptosomal-associated protein, 23kDa##BC022890|SNAP23|8773|synaptosomal-associated protein, 23kDa##BC003686|SNAP23|8773|synaptosomal-associated protein, 23kDa##AK313161|SNAP23|8773|synaptosomal-associated protein, 23kDa##BC000148|SNAP23|8773|synaptosomal-associated protein, 23kDa##AJ011915|SNAP23|8773|synaptosomal-associated protein, 23kDa##BX538324|LRRC57|255252|leucine rich repeat containing 57##BC051262|LRRC57|255252|leucine rich repeat containing 57##BC058935|LRRC57|255252|leucine rich repeat containing 57##AK094131|LRRC57|255252|leucine rich repeat containing 57##CR749223|LRRC57|255252|leucine rich repeat containing 57##AK309861|LRRC57|255252|leucine rich repeat containing 57##AK094891|LRRC57|255252|leucine rich repeat containing 57##NM_153260|LRRC57|255252|leucine rich repeat containing 57	0.0	
chr16	71879700	71879855	reg1038831.p2	3.522	+	TSC_hg19_v1_chr16_-_71842963 BC036283 AK128078 NM_001030007 NM_001128 AK314484	-36799	-	TSC_hg19_v1_chr16_-_71842738 AK293233 AK225906 AK294546 AK299630	-37024	-	TSC_hg19_v1_chr16_-_71842690 AB015317 Y12226	-37143	-	TSC_hg19_v1_chr16_+_71879878 AB621810	98	+	TSC_hg19_v1_chr16_+_71879908 NM_001137675	144	+	AF070588 AK296603 NM_001201553 NM_017530	37650	-	BC036283|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK128078|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##NM_001030007|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##NM_001128|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK314484|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK293233|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK225906|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK294546|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK299630|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AB015317|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##Y12226|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##NM_001137675|ATXN1L|342371|ataxin 1-like##AF070588|ZNF821|55565|zinc finger protein 821##AK296603|ZNF821|55565|zinc finger protein 821##NM_001201553|ZNF821|55565|zinc finger protein 821##NM_017530|ZNF821|55565|zinc finger protein 821	0.838492	CTCF.p2:-20:0.838
chr19	13950281	13950415	reg1039133.p2	3.522	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	-3246	-	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-44103	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-65064	+	BC101209 BC101210 NM_001098622	37714	+	AK097431 NM_024323	66560	-	NM_017721 TSC_hg19_v1_chr19_+_14017006	66632	+	AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57##NM_017721|CC2D1A|54862|coiled-coil and C2 domain containing 1A	0.0	
chr19	2052266	2052350	reg1027284.p3	3.522	+	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-1075	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-6067	-	TSC_hg19_v1_chr19_-_2042036 AK001730	-10258	-	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	32935	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	43957	-	TSC_hg19_v1_chr19_-_2096297 AL832474	43986	-	BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK001730|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A	0.0	
chr2	110341092	110341195	reg1041614.p1	3.522	+	NM_001099289 DQ307286	-595080	+	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	-735396	-	TSC_hg19_v1_chr2_-_109605623 AK296936	-735524	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	30338	-	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	30582	-	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	30802	+	NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##AK296936|EDAR|10913|ectodysplasin A receptor##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57	0.0	
chr2	182170521	182170634	reg1032038.p2	3.522	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-324750	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-324934	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-325207	+	NM_000885	151041	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	151473	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	151745	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.0	
chr2	37773637	37773726	reg1038890.p1	3.522	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-201868	+	BC030706 BC012820 AB015982 NM_005813	-229488	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-314835	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	125098	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	125708	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	378751	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.899685	CTCF.p2:-7:0.900
chr3	55641908	55642077	reg1035887.p1	3.522	+	TSC_hg19_v1_chr3_-_55521567 AK090582	-120374	-	BC064694 NM_003392 AK290375 TSC_hg19_v1_chr3_-_55521332	-120660	-	AK290869 TSC_hg19_v1_chr3_-_55515412	-126584	-	BC111550 BC112391 AB002376 NM_015576	860385	-	TSC_hg19_v1_chr3_+_56591202 NM_001012506 NM_001141947 BC047509 BC132827	949210	+	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	949254	+	AK090582|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC064694|WNT5A|7474|wingless-type MMTV integration site family, member 5A##NM_003392|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290375|WNT5A|7474|wingless-type MMTV integration site family, member 5A##AK290869|WNT5A|7474|wingless-type MMTV integration site family, member 5A##BC111550|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##BC112391|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##AB002376|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_015576|ERC2|26059|ELKS/RAB6-interacting/CAST family member 2##NM_001012506|CCDC66|285331|coiled-coil domain containing 66##NM_001141947|CCDC66|285331|coiled-coil domain containing 66##BC047509|CCDC66|285331|coiled-coil domain containing 66##BC132827|CCDC66|285331|coiled-coil domain containing 66##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66	0.0	
chr5	145425889	145426016	reg1039061.p1	3.522	+	TSC_hg19_v1_chr5_+_145317317 AL833297	-108584	+	TSC_hg19_v1_chr5_+_145316146 NM_152550 AK074234 AK292576 BC125106 BC125107	-109781	+	NM_001080516	-173422	-	HQ258084 BC130586 BC130588 BC144387 BC144388 BC144389 BC144392 NM_001029869	57959	-	U56252 TSC_hg19_v1_chr5_-_145523016	97057	-	TSC_hg19_v1_chr5_-_145562187 BC131798 BC110084 D84223 BC151214 AK304134 BC068041 AK293750 AK025441 AK295874 AF151026 BC105581 AK315178 BC150213	136187	-	AL833297|SH3RF2|153769|SH3 domain containing ring finger 2##NM_152550|SH3RF2|153769|SH3 domain containing ring finger 2##AK074234|SH3RF2|153769|SH3 domain containing ring finger 2##AK292576|SH3RF2|153769|SH3 domain containing ring finger 2##BC125106|SH3RF2|153769|SH3 domain containing ring finger 2##BC125107|SH3RF2|153769|SH3 domain containing ring finger 2##NM_001080516|GRXCR2|643226|glutaredoxin, cysteine rich 2##HQ258084|PLAC8L1|153770|PLAC8-like 1##BC130586|PLAC8L1|153770|PLAC8-like 1##BC130588|PLAC8L1|153770|PLAC8-like 1##BC144387|PLAC8L1|153770|PLAC8-like 1##BC144388|PLAC8L1|153770|PLAC8-like 1##BC144389|PLAC8L1|153770|PLAC8-like 1##BC144392|PLAC8L1|153770|PLAC8-like 1##NM_001029869|PLAC8L1|153770|PLAC8-like 1##U56252|LARS|51520|leucyl-tRNA synthetase##BC131798|LARS|51520|leucyl-tRNA synthetase##BC110084|LARS|51520|leucyl-tRNA synthetase##D84223|LARS|51520|leucyl-tRNA synthetase##BC151214|LARS|51520|leucyl-tRNA synthetase##AK304134|LARS|51520|leucyl-tRNA synthetase##BC068041|LARS|51520|leucyl-tRNA synthetase##AK293750|LARS|51520|leucyl-tRNA synthetase##AK025441|LARS|51520|leucyl-tRNA synthetase##AK295874|LARS|51520|leucyl-tRNA synthetase##AF151026|LARS|51520|leucyl-tRNA synthetase##BC105581|LARS|51520|leucyl-tRNA synthetase##AK315178|LARS|51520|leucyl-tRNA synthetase##BC150213|LARS|51520|leucyl-tRNA synthetase	0.0	
chr7	117560117	117560262	reg1036768.p1	3.522	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-46646	-	AB051545 AK308081 TSC_hg19_v1_chr7_-_117513496 AK091548 AX747051	-46708	-	M28668 NM_000492 TSC_hg19_v1_chr7_+_117120057 BC143713	-440151	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	263982	+	NM_019644 AK302407	304545	+	AK307139 AB028967 NM_012281	2353515	+	BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB051545|CTTNBP2|83992|cortactin binding protein 2##AK308081|CTTNBP2|83992|cortactin binding protein 2##AK091548|CTTNBP2|83992|cortactin binding protein 2##M28668|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_000492|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##BC143713|CFTR|1080|cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7)##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2	0.0	
chr7	30204386	30204546	reg1008979.p2	3.522	+	TSC_hg19_v1_chr7_+_30174621 NM_152793 AK096533 AL834391 AK098769 AB528783 AK294982	-29884	+	TSC_hg19_v1_chr7_+_30068250 BC002838 AF308300 AF380162 DQ893498 DQ896458 CU678236	-136175	+	TSC_hg19_v1_chr7_+_30068010 NM_001197026 NM_001197027 NM_032639 AK294857 BC053990 AK023180	-136465	+	AF513707 NM_147128	119456	+	TSC_hg19_v1_chr7_+_30324515 AF527533	120083	+	TSC_hg19_v1_chr7_+_30324634 AY054122	120190	+	NM_152793|C7orf41|222166|chromosome 7 open reading frame 41##AK096533|C7orf41|222166|chromosome 7 open reading frame 41##AL834391|C7orf41|222166|chromosome 7 open reading frame 41##AK098769|C7orf41|222166|chromosome 7 open reading frame 41##AK294982|C7orf41|222166|chromosome 7 open reading frame 41##BC002838|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF308300|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF380162|PLEKHA8P1|51054|pleckstrin homology domain containing, family A member 8 pseudogene 1##DQ893498|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##DQ896458|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197026|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_001197027|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##NM_032639|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK294857|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##BC053990|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AK023180|PLEKHA8|84725|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 8##AF513707|ZNRF2|223082|zinc and ring finger 2##NM_147128|ZNRF2|223082|zinc and ring finger 2##AF527533|ZNRF2|223082|zinc and ring finger 2##AY054122|ZNRF2|223082|zinc and ring finger 2	0.0	
chr9	109515574	109515664	reg1041141.p1	3.522	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-1058701	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	-1058766	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	-1090862	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	109745	+	TSC_hg19_v1_chr9_+_109686439 CR749850	170850	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	529913	+	AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##CR749850|ZNF462|58499|zinc finger protein 462##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.0	
chrX	17831023	17831148	reg1038772.p1	3.522	+	TSC_hg19_v1_chrX_+_17755572 BC026159 NM_001037535 NM_001037536 NM_001037540 NM_006746 AK313993 BC009193 AF160728	-75490	+	AY456992 NM_001136024	-177673	+	TSC_hg19_v1_chrX_+_17393877 GQ988776	-437205	+	AK056214 AK298873 AK314631 NM_001172732 NM_001172739 NM_001172743 NM_021785	48320	-	DQ892470 DQ895683 BC096745 BC037301 AK128155 NM_001184767 NM_153346	407863	-	Y18004 BC051913 TSC_hg19_v1_chrX_-_18372809 BC064617 AK303064 AK315116 BC040497 NM_006089	541725	-	BC026159|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037535|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037536|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_001037540|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##NM_006746|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AK313993|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##BC009193|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AF160728|SCML1|6322|sex comb on midleg-like 1 (Drosophila)##AY456992|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##NM_001136024|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##GQ988776|NHS|4810|Nance-Horan syndrome (congenital cataracts and dental anomalies)##AK056214|RAI2|10742|retinoic acid induced 2##AK298873|RAI2|10742|retinoic acid induced 2##AK314631|RAI2|10742|retinoic acid induced 2##NM_001172732|RAI2|10742|retinoic acid induced 2##NM_001172739|RAI2|10742|retinoic acid induced 2##NM_001172743|RAI2|10742|retinoic acid induced 2##NM_021785|RAI2|10742|retinoic acid induced 2##DQ892470|BEND2|139105|BEN domain containing 2##DQ895683|BEND2|139105|BEN domain containing 2##BC096745|BEND2|139105|BEN domain containing 2##BC037301|BEND2|139105|BEN domain containing 2##AK128155|BEND2|139105|BEN domain containing 2##NM_001184767|BEND2|139105|BEN domain containing 2##NM_153346|BEND2|139105|BEN domain containing 2##Y18004|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC051913|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC064617|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK303064|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##AK315116|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##BC040497|SCML2|10389|sex comb on midleg-like 2 (Drosophila)##NM_006089|SCML2|10389|sex comb on midleg-like 2 (Drosophila)	0.30875	CTCF.p2:-9:0.309
chr10	70847833	70847924	reg1036930.p2	3.521	+	TSC_hg19_v1_chr10_+_70847855 NM_002727	-42	+	NM_015634 TSC_hg19_v1_chr10_+_70748561 AB033105 BC006427 AK291343 BC012180	-99343	+	BC104671 NM_004728 TSC_hg19_v1_chr10_+_70715925 BC009432 U41387 AK315585 BC008071 BC004182 BC017228 AB527408 CU675917	-131946	+	TSC_hg19_v1_chr10_+_70847860 D28395 BC022313 AK311873 BC015516 J03223 X17042 CU677333 AB528400	6	+	TSC_hg19_v1_chr10_+_70883915 NM_001035260 NM_004896 BC022505	36013	+	TSC_hg19_v1_chr10_+_70883933 BX649092 AK315496	36055	+	NM_002727|SRGN|5552|serglycin##NM_015634|KIAA1279|26128|KIAA1279##AB033105|KIAA1279|26128|KIAA1279##BC006427|KIAA1279|26128|KIAA1279##AK291343|KIAA1279|26128|KIAA1279##BC012180|KIAA1279|26128|KIAA1279##BC104671|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##NM_004728|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC009432|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##U41387|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##AK315585|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC008071|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC004182|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##BC017228|DDX21|9188|DEAD (Asp-Glu-Ala-Asp) box polypeptide 21##D28395|SRGN|5552|serglycin##BC022313|SRGN|5552|serglycin##AK311873|SRGN|5552|serglycin##BC015516|SRGN|5552|serglycin##J03223|SRGN|5552|serglycin##X17042|SRGN|5552|serglycin##NM_001035260|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##NM_004896|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BC022505|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##BX649092|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)##AK315496|VPS26A|9559|vacuolar protein sorting 26 homolog A (S. pombe)	0.0	
chr10	91890826	91890938	reg1039846.p2	3.521	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-392115	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-429507	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-485558	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	726564	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	726851	-	TSC_hg19_v1_chr10_+_92631241 BC006991	740375	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.0	
chr1	167189930	167190027	reg1033035.p2	3.521	+	NM_001080426	-125892	+	CU687006 BC074830 BC074876 TSC_hg19_v1_chr1_-_167059615 BC107164 BC107165 AK312833 BC069705 BC069723 BC069745 BC069761 BC069789 NM_005814 U79725	-130283	-	TSC_hg19_v1_chr1_+_166958503 AK302253 AK131066 DQ076156 GU383113 AK027810 NM_032858 BC028595 AB590622 CU688524	-231436	+	TSC_hg19_v1_chr1_+_167190127 NM_001198786 NM_002697 AK302525 AK303201 AK308004 AK091438 S66901 BC052274 X13403	79	+	NM_001198783 TSC_hg19_v1_chr1_+_167298306	108320	+	TSC_hg19_v1_chr1_+_167298389 AY113189 BC001664 BC003571	108461	+	NM_001080426|DUSP27|92235|dual specificity phosphatase 27 (putative)##BC074830|GPA33|10223|glycoprotein A33 (transmembrane)##BC074876|GPA33|10223|glycoprotein A33 (transmembrane)##BC107164|GPA33|10223|glycoprotein A33 (transmembrane)##BC107165|GPA33|10223|glycoprotein A33 (transmembrane)##AK312833|GPA33|10223|glycoprotein A33 (transmembrane)##BC069705|GPA33|10223|glycoprotein A33 (transmembrane)##BC069723|GPA33|10223|glycoprotein A33 (transmembrane)##BC069745|GPA33|10223|glycoprotein A33 (transmembrane)##BC069761|GPA33|10223|glycoprotein A33 (transmembrane)##BC069789|GPA33|10223|glycoprotein A33 (transmembrane)##NM_005814|GPA33|10223|glycoprotein A33 (transmembrane)##U79725|GPA33|10223|glycoprotein A33 (transmembrane)##AK302253|MAEL|84944|maelstrom homolog (Drosophila)##AK131066|MAEL|84944|maelstrom homolog (Drosophila)##DQ076156|MAEL|84944|maelstrom homolog (Drosophila)##GU383113|MAEL|84944|maelstrom homolog (Drosophila)##AK027810|MAEL|84944|maelstrom homolog (Drosophila)##NM_032858|MAEL|84944|maelstrom homolog (Drosophila)##BC028595|MAEL|84944|maelstrom homolog (Drosophila)##NM_001198786|POU2F1|5451|POU class 2 homeobox 1##NM_002697|POU2F1|5451|POU class 2 homeobox 1##AK302525|POU2F1|5451|POU class 2 homeobox 1##AK303201|POU2F1|5451|POU class 2 homeobox 1##AK308004|POU2F1|5451|POU class 2 homeobox 1##AK091438|POU2F1|5451|POU class 2 homeobox 1##BC052274|POU2F1|5451|POU class 2 homeobox 1##X13403|POU2F1|5451|POU class 2 homeobox 1##NM_001198783|POU2F1|5451|POU class 2 homeobox 1##AY113189|POU2F1|5451|POU class 2 homeobox 1##BC001664|POU2F1|5451|POU class 2 homeobox 1##BC003571|POU2F1|5451|POU class 2 homeobox 1	0.046894	
chr1	185308274	185308451	reg1041058.p1	3.521	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-21892	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-22043	-	TSC_hg19_v1_chr1_+_185126418 AK291443	-181966	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	395214	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	957045	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	1035895	-	NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)	0.0	
chr12	108905623	108905788	reg1014163.p1	3.521	+	U79526 U79527 AK291800 NM_001142343 NM_001142344 NM_004072	-172621	-	NM_001142345	-191267	-	BC110330 AB018332 NM_014653	-382218	+	TSC_hg19_v1_chr12_+_108909056 AK026074 NM_007076 AK000014 AY358992 BC001342 BC064629	3377	+	AB385287 D63879 TSC_hg19_v1_chr12_-_108954936 BC103706 BC093784 BC111983 BC143253 BC004547 BC024279 AB020880 AF387506 BC032601	49229	-	TSC_hg19_v1_chr12_-_108954945 AK225174 AK304834	49241	-	U79526|CMKLR1|1240|chemokine-like receptor 1##U79527|CMKLR1|1240|chemokine-like receptor 1##AK291800|CMKLR1|1240|chemokine-like receptor 1##NM_001142343|CMKLR1|1240|chemokine-like receptor 1##NM_001142344|CMKLR1|1240|chemokine-like receptor 1##NM_004072|CMKLR1|1240|chemokine-like receptor 1##NM_001142345|CMKLR1|1240|chemokine-like receptor 1##BC110330|WSCD2|9671|WSC domain containing 2##AB018332|WSCD2|9671|WSC domain containing 2##NM_014653|WSCD2|9671|WSC domain containing 2##AK026074|FICD|11153|FIC domain containing##NM_007076|FICD|11153|FIC domain containing##AK000014|FICD|11153|FIC domain containing##AY358992|FICD|11153|FIC domain containing##BC001342|FICD|11153|FIC domain containing##BC064629|FICD|11153|FIC domain containing##D63879|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC103706|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC093784|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC111983|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC143253|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC004547|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC024279|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AB020880|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AF387506|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##BC032601|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK225174|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3##AK304834|SART3|9733|squamous cell carcinoma antigen recognized by T cells 3	0.0	
chr12	50038954	50039060	reg1000024.p3	3.521	+	BC067364 NM_001031698	-14681	+	TSC_hg19_v1_chr12_+_50017344 AK123353 BC050398 AL834216 NM_012272	-21636	+	AM393365 AL136748 BC035621 AK302702 AK093242 AX748009 NM_032130	-39662	-	AB384661 TSC_hg19_v1_chr12_-_50101046	62003	-	TSC_hg19_v1_chr12_-_50101189 AK128195	62151	-	TSC_hg19_v1_chr12_-_50101206 AB095934 BC159100 NM_175736 NM_198900	62205	-	BC067364|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_001031698|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AK123353|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##BC050398|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AL834216|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##NM_012272|PRPF40B|25766|PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)##AM393365|FAM186B|84070|family with sequence similarity 186, member B##AL136748|FAM186B|84070|family with sequence similarity 186, member B##BC035621|FAM186B|84070|family with sequence similarity 186, member B##AK302702|FAM186B|84070|family with sequence similarity 186, member B##AK093242|FAM186B|84070|family with sequence similarity 186, member B##NM_032130|FAM186B|84070|family with sequence similarity 186, member B##AK128195|FMNL3|91010|formin-like 3##AB095934|FMNL3|91010|formin-like 3##BC159100|FMNL3|91010|formin-like 3##NM_175736|FMNL3|91010|formin-like 3##NM_198900|FMNL3|91010|formin-like 3	0.0	
chr1	6966873	6967013	reg1039183.p1	3.521	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-121452	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-205012	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-205061	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	864433	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	877466	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	877882	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.0	
chr17	47645548	47645661	reg1003339.p2	3.521	+	TSC_hg19_v1_chr17_+_47572654 AK313654 NM_002507 BC050309 M14764	-72916	+	TSC_hg19_v1_chr17_-_47492243 S85655 BC013401 AK307767 AK223181 AK290766 AK302258 AK312649 NM_002634	-153356	-	BC095460 TSC_hg19_v1_chr17_-_47492215	-153389	-	TSC_hg19_v1_chr17_+_47653192 AL834282 NM_007225	7632	+	TSC_hg19_v1_chr17_+_47653475 BC022541 AK308928 AY358526 AB385434	7923	+	TSC_hg19_v1_chr17_-_47755471 BC003385 AK222589 AK312691 AJ000644 AK303268 AK316366 BC001269 AK293587 AK300616 NM_001007226 NM_001007227 NM_001007228 NM_001007229 NM_001007230 NM_003563	109828	-	AK313654|NGFR|4804|nerve growth factor receptor##NM_002507|NGFR|4804|nerve growth factor receptor##BC050309|NGFR|4804|nerve growth factor receptor##M14764|NGFR|4804|nerve growth factor receptor##S85655|PHB|5245|prohibitin##BC013401|PHB|5245|prohibitin##AK307767|PHB|5245|prohibitin##AK223181|PHB|5245|prohibitin##AK290766|PHB|5245|prohibitin##AK302258|PHB|5245|prohibitin##AK312649|PHB|5245|prohibitin##NM_002634|PHB|5245|prohibitin##BC095460|PHB|5245|prohibitin##AL834282|NXPH3|11248|neurexophilin 3##NM_007225|NXPH3|11248|neurexophilin 3##BC022541|NXPH3|11248|neurexophilin 3##AK308928|NXPH3|11248|neurexophilin 3##AY358526|NXPH3|11248|neurexophilin 3##BC003385|SPOP|8405|speckle-type POZ protein##AK222589|SPOP|8405|speckle-type POZ protein##AK312691|SPOP|8405|speckle-type POZ protein##AJ000644|SPOP|8405|speckle-type POZ protein##AK303268|SPOP|8405|speckle-type POZ protein##AK316366|SPOP|8405|speckle-type POZ protein##BC001269|SPOP|8405|speckle-type POZ protein##AK293587|SPOP|8405|speckle-type POZ protein##AK300616|SPOP|8405|speckle-type POZ protein##NM_001007226|SPOP|8405|speckle-type POZ protein##NM_001007227|SPOP|8405|speckle-type POZ protein##NM_001007228|SPOP|8405|speckle-type POZ protein##NM_001007229|SPOP|8405|speckle-type POZ protein##NM_001007230|SPOP|8405|speckle-type POZ protein##NM_003563|SPOP|8405|speckle-type POZ protein	0.0	
chr18	6393900	6393997	reg1027164.p2	3.521	+	NM_001080209	-501846	-	TSC_hg19_v1_chr18_-_5630663 BC008377	-763301	-	AF069072 AB023204 NM_012307 TSC_hg19_v1_chr18_-_5543997 AK128531	-849960	-	BC039316 NM_173464 TSC_hg19_v1_chr18_-_6414931	20967	-	NM_001243517	117466	+	NM_001010000 BX648684 AK308259 AK302026	440517	+	NM_001080209|TMEM200C|645369|transmembrane protein 200C##BC008377|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AF069072|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AB023204|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##NM_012307|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##AK128531|EPB41L3|23136|erythrocyte membrane protein band 4.1-like 3##BC039316|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_173464|L3MBTL4|91133|l(3)mbt-like 4 (Drosophila)##NM_001243517|LOC100130480|100130480|uncharacterized LOC100130480##NM_001010000|ARHGAP28|79822|Rho GTPase activating protein 28##BX648684|ARHGAP28|79822|Rho GTPase activating protein 28##AK308259|ARHGAP28|79822|Rho GTPase activating protein 28##AK302026|ARHGAP28|79822|Rho GTPase activating protein 28	0.412317	
chr2	160944519	160944680	reg1038307.p1	3.521	+	U17033 U17034 NM_001007267 NM_001195641 NM_007366 TSC_hg19_v1_chr2_-_160919148	-25464	-	BC140823 BC144631 TSC_hg19_v1_chr2_-_160919021	-25620	-	NM_001198759 NM_001198760 NM_002349 TSC_hg19_v1_chr2_-_160761270	-183309	-	AB463075 AM393800 M35198 NM_000888 BC121178 BC143656	111988	-	AK304203 AL831998 TSC_hg19_v1_chr2_-_161056784 AK290300 AK313944	112196	-	BC069687 BC069706 BC069763 BC080620 BC065192 TSC_hg19_v1_chr2_-_161130216	185590	-	U17033|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##U17034|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001007267|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001195641|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_007366|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC140823|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC144631|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##NM_001198759|LY75-CD302|100526664|LY75-CD302 readthrough##NM_001198760|LY75-CD302|100526664|LY75-CD302 readthrough##NM_002349|LY75|4065|lymphocyte antigen 75##AM393800|ITGB6|3694|integrin, beta 6##M35198|ITGB6|3694|integrin, beta 6##NM_000888|ITGB6|3694|integrin, beta 6##BC121178|ITGB6|3694|integrin, beta 6##BC143656|ITGB6|3694|integrin, beta 6##AK304203|ITGB6|3694|integrin, beta 6##AL831998|ITGB6|3694|integrin, beta 6##AK290300|ITGB6|3694|integrin, beta 6##AK313944|ITGB6|3694|integrin, beta 6##BC069687|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069706|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC069763|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC080620|RBMS1|5937|RNA binding motif, single stranded interacting protein 1##BC065192|RBMS1|5937|RNA binding motif, single stranded interacting protein 1	0.0	
chr22	42362649	42362728	reg1008642.p1	3.521	+	AB528101 CR457392 CU012957 CU013245 BC000705 AL160131 TSC_hg19_v1_chr22_-_42343157 BC007495 CR456399 NM_001002876 NM_024053 AK123479	-19565	-	EU035297 NM_001110215	-26466	-	AB590047 AF373846 AX772914 AX800072 BC105123 NM_052945 BC112030	-39889	-	TSC_hg19_v1_chr22_+_42372810 NM_019106 NM_145733 AK290037 AK299919 AL833942 BC111779 CR456572 AF285107 AF285108 AF285109	10220	+	AK128138 NM_152613 TSC_hg19_v1_chr22_+_42394808 AK129656 AK296138 BC022546 BC022549 BC038789 AK310980 CR456400 AB463345 CU012958 CU013246	32087	+	AB528190 CU013127 CU013415 DQ891874 DQ895062 CR456527 M38083 BC000095 TSC_hg19_v1_chr22_-_42466570	103747	-	CR457392|CENPM|79019|centromere protein M##BC000705|CENPM|79019|centromere protein M##AL160131|CENPM|79019|centromere protein M##BC007495|CENPM|79019|centromere protein M##CR456399|CENPM|79019|centromere protein M##NM_001002876|CENPM|79019|centromere protein M##NM_024053|CENPM|79019|centromere protein M##AK123479|CENPM|79019|centromere protein M##EU035297|CENPM|79019|centromere protein M##NM_001110215|CENPM|79019|centromere protein M##AF373846|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX772914|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##AX800072|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC105123|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_052945|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##BC112030|TNFRSF13C|115650|tumor necrosis factor receptor superfamily, member 13C##NM_019106|SEPT3|55964|septin 3##NM_145733|SEPT3|55964|septin 3##AK290037|SEPT3|55964|septin 3##AK299919|SEPT3|55964|septin 3##AL833942|SEPT3|55964|septin 3##BC111779|SEPT3|55964|septin 3##CR456572|SEPT3|55964|septin 3##AF285107|SEPT3|55964|septin 3##AF285108|SEPT3|55964|septin 3##AF285109|SEPT3|55964|septin 3##AK128138|WBP2NL|164684|WBP2 N-terminal like##NM_152613|WBP2NL|164684|WBP2 N-terminal like##AK129656|WBP2NL|164684|WBP2 N-terminal like##AK296138|WBP2NL|164684|WBP2 N-terminal like##BC022546|WBP2NL|164684|WBP2 N-terminal like##BC022549|WBP2NL|164684|WBP2 N-terminal like##CR456400|WBP2NL|164684|WBP2 N-terminal like##CU013127|NAGA|4668|N-acetylgalactosaminidase, alpha-##CU013415|NAGA|4668|N-acetylgalactosaminidase, alpha-##DQ891874|NAGA|4668|N-acetylgalactosaminidase, alpha-##DQ895062|NAGA|4668|N-acetylgalactosaminidase, alpha-##CR456527|NAGA|4668|N-acetylgalactosaminidase, alpha-##M38083|NAGA|4668|N-acetylgalactosaminidase, alpha-##BC000095|NAGA|4668|N-acetylgalactosaminidase, alpha-	0.351796	CTCF.p2:-3:0.352
chr5	46093405	46093524	reg1042343.p1	3.521	+	AF488549 NM_021072	-397245	-	AF064876 TSC_hg19_v1_chr5_-_45695947	-397573	-	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	-1284437	+	AK300860 TSC_hg19_v1_chr5_-_49737200 BC059398	3643735	-	TSC_hg19_v1_chr5_-_49737229 NM_198449	3643779	-	AK298680 AK314466 BC105789 NM_001178055	3868268	+	AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AK300860|EMB|133418|embigin##BC059398|EMB|133418|embigin##NM_198449|EMB|133418|embigin##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	0.0	
chrX	15800609	15800698	reg1046306.p2	3.521	+	AB021660 AK291050 NM_007220	-44252	+	BC014317 NM_020665	-117500	-	AK315144 NM_021804 AB193259	-180419	-	BC113454 BC113480 NM_005089 TSC_hg19_v1_chrX_+_15808594 D49677 BC050451 BC065719 AK309673 HQ258575	7946	+	TSC_hg19_v1_chrX_-_15872876 AF251295	72223	-	TSC_hg19_v1_chrX_-_15872883 BC001117 BC071867	72233	-	AB021660|CA5B|11238|carbonic anhydrase VB, mitochondrial##AK291050|CA5B|11238|carbonic anhydrase VB, mitochondrial##NM_007220|CA5B|11238|carbonic anhydrase VB, mitochondrial##BC014317|TMEM27|57393|transmembrane protein 27##NM_020665|TMEM27|57393|transmembrane protein 27##AK315144|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##NM_021804|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##AB193259|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##BC113454|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC113480|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##NM_005089|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##D49677|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC050451|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC065719|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AK309673|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##HQ258575|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##BC001117|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit##BC071867|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	0.037533	
chr10	5904320	5904440	reg1027315.p1	3.520	+	TSC_hg19_v1_chr10_-_5855394 Y13286 AK297177 AK297554 AK312485 NM_001115156 NM_001494	-48945	-	BX648038 AB451295 AB451429 BT006868 CR457073 D13988 DQ890573 DQ893733 BC005145 TSC_hg19_v1_chr10_-_5855330 AK309360	-49114	-	TSC_hg19_v1_chr10_+_5772610 AB095927	-131708	+	TSC_hg19_v1_chr10_-_5931834 BC067892 NM_001009941 NM_001009943 NM_019046	27476	-	TSC_hg19_v1_chr10_+_5932205 AK095343	27819	+	TSC_hg19_v1_chr10_+_5932214 NM_178150	27831	+	Y13286|GDI2|2665|GDP dissociation inhibitor 2##AK297177|GDI2|2665|GDP dissociation inhibitor 2##AK297554|GDI2|2665|GDP dissociation inhibitor 2##AK312485|GDI2|2665|GDP dissociation inhibitor 2##NM_001115156|GDI2|2665|GDP dissociation inhibitor 2##NM_001494|GDI2|2665|GDP dissociation inhibitor 2##BX648038|GDI2|2665|GDP dissociation inhibitor 2##AB451295|GDI2|2665|GDP dissociation inhibitor 2##AB451429|GDI2|2665|GDP dissociation inhibitor 2##BT006868|GDI2|2665|GDP dissociation inhibitor 2##CR457073|GDI2|2665|GDP dissociation inhibitor 2##D13988|GDI2|2665|GDP dissociation inhibitor 2##DQ890573|GDI2|2665|GDP dissociation inhibitor 2##DQ893733|GDI2|2665|GDP dissociation inhibitor 2##BC005145|GDI2|2665|GDP dissociation inhibitor 2##AK309360|GDI2|2665|GDP dissociation inhibitor 2##AB095927|FAM208B|54906|family with sequence similarity 208, member B##BC067892|ANKRD16|54522|ankyrin repeat domain 16##NM_001009941|ANKRD16|54522|ankyrin repeat domain 16##NM_001009943|ANKRD16|54522|ankyrin repeat domain 16##NM_019046|ANKRD16|54522|ankyrin repeat domain 16##AK095343|FBXO18|84893|F-box protein, helicase, 18##NM_178150|FBXO18|84893|F-box protein, helicase, 18	0.0	
chr1	113051254	113051402	reg1037326.p2	3.520	+	AB045116 NM_004185	-41289	+	TSC_hg19_v1_chr1_+_112938871 BC016029 AK022544 AK092791 AX747733	-112460	+	NM_018704 TSC_hg19_v1_chr1_+_112938844 AK023340	-112502	+	BC141825 NM_024494	41	+	TSC_hg19_v1_chr1_+_113161808 BX648738	110465	+	BC027898 TSC_hg19_v1_chr1_-_113161750 AK021719 CU688054 EU831659 EU831742 AK295507 AK295955 AK291042 AK308727 AK304004 BC047392 BX640667 AB081317 AB081318 AB081319 AB081320 BC065501 NM_017744 NM_138727 NM_138728 NM_138729	110553	-	AB045116|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_004185|WNT2B|7482|wingless-type MMTV integration site family, member 2B##BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK092791|LOC100129406|100129406|uncharacterized LOC100129406##NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like##BC141825|WNT2B|7482|wingless-type MMTV integration site family, member 2B##NM_024494|WNT2B|7482|wingless-type MMTV integration site family, member 2B##BX648738|CAPZA1|829|capping protein (actin filament) muscle Z-line, alpha 1##BC027898|ST7L|54879|suppression of tumorigenicity 7 like##AK021719|ST7L|54879|suppression of tumorigenicity 7 like##EU831659|ST7L|54879|suppression of tumorigenicity 7 like##EU831742|ST7L|54879|suppression of tumorigenicity 7 like##AK295507|ST7L|54879|suppression of tumorigenicity 7 like##AK295955|ST7L|54879|suppression of tumorigenicity 7 like##AK291042|ST7L|54879|suppression of tumorigenicity 7 like##AK308727|ST7L|54879|suppression of tumorigenicity 7 like##AK304004|ST7L|54879|suppression of tumorigenicity 7 like##BC047392|ST7L|54879|suppression of tumorigenicity 7 like##BX640667|ST7L|54879|suppression of tumorigenicity 7 like##AB081317|ST7L|54879|suppression of tumorigenicity 7 like##AB081318|ST7L|54879|suppression of tumorigenicity 7 like##AB081319|ST7L|54879|suppression of tumorigenicity 7 like##AB081320|ST7L|54879|suppression of tumorigenicity 7 like##BC065501|ST7L|54879|suppression of tumorigenicity 7 like##NM_017744|ST7L|54879|suppression of tumorigenicity 7 like##NM_138727|ST7L|54879|suppression of tumorigenicity 7 like##NM_138728|ST7L|54879|suppression of tumorigenicity 7 like##NM_138729|ST7L|54879|suppression of tumorigenicity 7 like	0.0	
chr1	145129793	145129929	reg1029566.p1	3.520	+	TSC_hg19_v1_chr1_+_145096519 CU674670 DQ892584 DQ895801	-33329	+	TSC_hg19_v1_chr1_+_145096446 NM_004892 AK289875 BC001364 AF047442	-33425	+	TSC_hg19_v1_chr1_-_145076026 CU692996 AF086451 BC110294 BC152553 BC025406 NM_022359	-53951	-	TSC_hg19_v1_chr1_+_145209107 NM_203458 BC010154 AK075065 BC090943 BC019835 AK092351 AK098372 AX747492 BC065219 AK293876 BC084572	79260	+	AY894562 AY894570 NM_001039703	163440	+	NM_145277 NM_202004 NM_213652 NM_213653 AK223575 AK092682 AK315852 AX747669 BC017926 AK096905 AK290831 AK292742 AK092692 AK124273 AX747673 BC085604	283402	+	DQ892584|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##DQ895801|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##NM_004892|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AK289875|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##BC001364|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AF047442|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##AF086451|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC152553|PDE4DIP|9659|phosphodiesterase 4D interacting protein##BC025406|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_022359|PDE4DIP|9659|phosphodiesterase 4D interacting protein##NM_203458|NOTCH2NL|388677|notch 2 N-terminal like##BC010154|NOTCH2NL|388677|notch 2 N-terminal like##AK075065|NOTCH2NL|388677|notch 2 N-terminal like##BC090943|NOTCH2NL|388677|notch 2 N-terminal like##BC019835|NOTCH2NL|388677|notch 2 N-terminal like##BC065219|NOTCH2NL|388677|notch 2 N-terminal like##BC084572|NOTCH2NL|388677|notch 2 N-terminal like##AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8##NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10##NM_145277|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_202004|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213652|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213653|HFE2|148738|hemochromatosis type 2 (juvenile)##AK223575|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092682|HFE2|148738|hemochromatosis type 2 (juvenile)##AK315852|HFE2|148738|hemochromatosis type 2 (juvenile)##BC017926|HFE2|148738|hemochromatosis type 2 (juvenile)##AK096905|HFE2|148738|hemochromatosis type 2 (juvenile)##AK290831|HFE2|148738|hemochromatosis type 2 (juvenile)##AK292742|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092692|HFE2|148738|hemochromatosis type 2 (juvenile)##AK124273|HFE2|148738|hemochromatosis type 2 (juvenile)##BC085604|HFE2|148738|hemochromatosis type 2 (juvenile)	0.017156	
chr1	221881544	221881724	reg1031159.p2	3.520	+	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	-828535	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	-828720	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	-828873	+	NM_144728	29167	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	33774	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	33796	-	DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##NM_144728|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10	0.0	
chr16	33239763	33239850	reg1036793.p1	3.520	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-34208	+	AL133588 NM_016212	-34827	+	AK300387 TSC_hg19_v1_chr16_+_32752635	-487170	+	AL133588 NM_016212	21708	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	22327	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	13415466	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1	0.0	
chr16	74138040	74138153	reg1036271.p2	3.520	+	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	-1045510	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	-1055875	-	TSC_hg19_v1_chr16_-_72991733 BC029653	-1146391	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	192597	+	TSC_hg19_v1_chr16_+_74330732 D50063 AB528643 CU680372	192675	+	TSC_hg19_v1_chr16_-_74401811 AK124154	263716	-	D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##BC029653|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##D50063|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.011546	
chr16	88078049	88078149	reg1035417.p2	3.520	+	AK094158 NM_001173543	-74476	+	AK315535 NM_001173542	-84623	+	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	-92931	+	NM_001127464	415779	+	TSC_hg19_v1_chr16_+_88519687 AF488691	441606	+	TSC_hg19_v1_chr16_+_88519921 NM_153813	441866	+	AK094158|BANP|54971|BTG3 associated nuclear protein##NM_001173543|BANP|54971|BTG3 associated nuclear protein##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein##NM_001127464|ZNF469|84627|zinc finger protein 469##AF488691|ZFPM1|161882|zinc finger protein, multitype 1##NM_153813|ZFPM1|161882|zinc finger protein, multitype 1	0.0	
chr17	27072219	27072375	reg1036852.p2	3.520	+	TSC_hg19_v1_chr17_+_27071025 NM_004295 BC001769 X80200 AK300804 AY937222 AY937223 AY937224 AY937225 AB529167 DQ892825 DQ896071 CU674876 AF082185	-1228	+	BC112240 BC113705 AK301429 AY242354 AY267371 HQ258347 NM_178170	-16483	+	NM_001160407	-18349	-	TSC_hg19_v1_chr17_-_27139467 AK095569	67150	-	BC021228 TSC_hg19_v1_chr17_-_27169811 BX647766 AK299477 AK001562 AK057665 NM_001077498 NM_018182	97493	-	TSC_hg19_v1_chr17_+_27182033 AB049388 AK023342 AY007435 BX537542 BC019094 NM_005702 CU676380 DQ892626 DQ895866 AF082657 AF082658	109726	+	NM_004295|TRAF4|9618|TNF receptor-associated factor 4##BC001769|TRAF4|9618|TNF receptor-associated factor 4##X80200|TRAF4|9618|TNF receptor-associated factor 4##AK300804|TRAF4|9618|TNF receptor-associated factor 4##AY937222|TRAF4|9618|TNF receptor-associated factor 4##AY937223|TRAF4|9618|TNF receptor-associated factor 4##AY937224|TRAF4|9618|TNF receptor-associated factor 4##DQ892825|TRAF4|9618|TNF receptor-associated factor 4##DQ896071|TRAF4|9618|TNF receptor-associated factor 4##AF082185|TRAF4|9618|TNF receptor-associated factor 4##BC112240|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##BC113705|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AK301429|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY242354|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY267371|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##HQ258347|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_178170|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_001160407|TLCD1|116238|TLC domain containing 1##AK095569|C17orf63|55731|chromosome 17 open reading frame 63##BC021228|C17orf63|55731|chromosome 17 open reading frame 63##BX647766|C17orf63|55731|chromosome 17 open reading frame 63##AK299477|C17orf63|55731|chromosome 17 open reading frame 63##AK001562|C17orf63|55731|chromosome 17 open reading frame 63##AK057665|C17orf63|55731|chromosome 17 open reading frame 63##NM_001077498|C17orf63|55731|chromosome 17 open reading frame 63##NM_018182|C17orf63|55731|chromosome 17 open reading frame 63##AB049388|ERAL1|26284|Era G-protein-like 1 (E. coli)##AK023342|ERAL1|26284|Era G-protein-like 1 (E. coli)##AY007435|ERAL1|26284|Era G-protein-like 1 (E. coli)##BX537542|ERAL1|26284|Era G-protein-like 1 (E. coli)##BC019094|ERAL1|26284|Era G-protein-like 1 (E. coli)##NM_005702|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ892626|ERAL1|26284|Era G-protein-like 1 (E. coli)##DQ895866|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082657|ERAL1|26284|Era G-protein-like 1 (E. coli)##AF082658|ERAL1|26284|Era G-protein-like 1 (E. coli)	0.0	
chr22	24038561	24038675	reg1043368.p1	3.520	+	AY101396 NM_153615	-5571	+	BC056888 AL080197 BC063390 AK310349 NM_016449	-64122	-	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	-116183	-	TSC_hg19_v1_chr22_-_24059494 BC033757	20847	-	TSC_hg19_v1_chr22_-_24059515 BC063045 BC050388 AK300413	20892	-	TSC_hg19_v1_chr22_-_24059525 BX538181 AK056875 AK091837 AX747211	20927	-	AY101396|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4##NM_153615|RGL4|266747|ral guanine nucleotide dissociation stimulator-like 4##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43##DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC063045|GUSBP11|91316|glucuronidase, beta pseudogene 11##BC050388|GUSBP11|91316|glucuronidase, beta pseudogene 11##AK300413|GUSBP11|91316|glucuronidase, beta pseudogene 11##BX538181|GUSBP11|91316|glucuronidase, beta pseudogene 11##AK056875|GUSBP11|91316|glucuronidase, beta pseudogene 11##AK091837|GUSBP11|91316|glucuronidase, beta pseudogene 11	0.0	
chr2	224822067	224822248	reg1032323.p2	3.520	+	TSC_hg19_v1_chr2_+_224822174 NM_022915 AK022763 BC012058 AK024052 CR457293 CU680184	-4	+	TSC_hg19_v1_chr2_-_224810053 BC065934 NM_020830 AJ310568	-12092	-	TSC_hg19_v1_chr2_-_224810031 BC021065	-12125	-	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	44471	-	AK295564 NM_001136530	81183	-	TSC_hg19_v1_chr2_-_224904004 BC015663 AK225823 AK297588 AK312499 NM_001136528 NM_006216	82013	-	NM_022915|MRPL44|65080|mitochondrial ribosomal protein L44##AK022763|MRPL44|65080|mitochondrial ribosomal protein L44##BC012058|MRPL44|65080|mitochondrial ribosomal protein L44##AK024052|MRPL44|65080|mitochondrial ribosomal protein L44##CR457293|MRPL44|65080|mitochondrial ribosomal protein L44##BC065934|WDFY1|57590|WD repeat and FYVE domain containing 1##NM_020830|WDFY1|57590|WD repeat and FYVE domain containing 1##AJ310568|WDFY1|57590|WD repeat and FYVE domain containing 1##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##BC015663|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK225823|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK297588|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK312499|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136528|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_006216|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2	0.0	
chr3	183273452	183273576	reg1037679.p2	3.520	+	AF441792 CU689348 DQ894788 EU176275 TSC_hg19_v1_chr3_-_183273495 AK097125 AK314473 BX648370 BC032348 NM_130446	-62	-	TSC_hg19_v1_chr3_+_183165436 AK057000	-108084	+	NM_015078 BC064632 AK124500 AK310962	-127575	-	BC142993 TSC_hg19_v1_chr3_+_183353410 AK026326 AY422472 BX648466 BX648812 NM_017644	79886	+	TSC_hg19_v1_chr3_+_183415597 AB033023 BC150273 NM_018023	142108	+	TSC_hg19_v1_chr3_-_183543366 BC006434 AK022810 NM_024871	269855	-	AF441792|KLHL6|89857|kelch-like 6 (Drosophila)##DQ894788|KLHL6|89857|kelch-like 6 (Drosophila)##EU176275|KLHL6|89857|kelch-like 6 (Drosophila)##AK097125|KLHL6|89857|kelch-like 6 (Drosophila)##AK314473|KLHL6|89857|kelch-like 6 (Drosophila)##BX648370|KLHL6|89857|kelch-like 6 (Drosophila)##BC032348|KLHL6|89857|kelch-like 6 (Drosophila)##NM_130446|KLHL6|89857|kelch-like 6 (Drosophila)##AK057000|LOC100505687|100505687|uncharacterized LOC100505687##NM_015078|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC064632|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK124500|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##AK310962|MCF2L2|23101|MCF.2 cell line derived transforming sequence-like 2##BC142993|KLHL24|54800|kelch-like 24 (Drosophila)##AK026326|KLHL24|54800|kelch-like 24 (Drosophila)##AY422472|KLHL24|54800|kelch-like 24 (Drosophila)##BX648466|KLHL24|54800|kelch-like 24 (Drosophila)##BX648812|KLHL24|54800|kelch-like 24 (Drosophila)##NM_017644|KLHL24|54800|kelch-like 24 (Drosophila)##AB033023|YEATS2|55689|YEATS domain containing 2##BC150273|YEATS2|55689|YEATS domain containing 2##NM_018023|YEATS2|55689|YEATS domain containing 2##BC006434|MAP6D1|79929|MAP6 domain containing 1##AK022810|MAP6D1|79929|MAP6 domain containing 1##NM_024871|MAP6D1|79929|MAP6 domain containing 1	0.0	
chr4	113239902	113239972	reg1037167.p1	3.520	+	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	-21410	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	-32936	-	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	-86853	+	BC036847 NM_024019 TSC_hg19_v1_chr4_-_113437337	197395	-	TSC_hg19_v1_chr4_-_113558057 BC044799 BC028584 AK002193	318109	-	NM_016648	318182	+	NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC036847|NEUROG2|63973|neurogenin 2##NM_024019|NEUROG2|63973|neurogenin 2##BC044799|C4orf21|55345|chromosome 4 open reading frame 21##BC028584|C4orf21|55345|chromosome 4 open reading frame 21##AK002193|C4orf21|55345|chromosome 4 open reading frame 21##NM_016648|LARP7|51574|La ribonucleoprotein domain family, member 7	0.0	
chr5	149145617	149145731	reg1031556.p1	3.520	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	-35798	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	-35847	+	AK300559 AK316002 BC041325 NM_001001669	-184590	+	AK123614 NM_001172699	5828	+	BC144044 BC035909 AB593141 M26061 NM_000440	178644	-	TSC_hg19_v1_chr5_+_149340320 NM_000112	194634	+	AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144044|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##BC035909|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##AB593141|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##M26061|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000440|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2	0.996178	CTCF.p2:19:0.996
chr6	108439090	108439178	reg1034618.p2	3.520	+	TSC_hg19_v1_chr6_-_108395940 BC016376 NM_014028	-43195	-	TSC_hg19_v1_chr6_-_108395924 AF533891 AY358795 BC059412 AK129854	-43204	-	TSC_hg19_v1_chr6_-_108395920 BC068581	-43214	-	NM_003269 AF220532	48103	+	BT007114 CR456898 CU677753 EU831975 EU832068 TSC_hg19_v1_chr6_-_108582163 AF062483 AB047360 AF034546	143009	-	TSC_hg19_v1_chr6_-_108582217 BC008444	143060	-	BC016376|OSTM1|28962|osteopetrosis associated transmembrane protein 1##NM_014028|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AF533891|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AY358795|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC059412|OSTM1|28962|osteopetrosis associated transmembrane protein 1##AK129854|OSTM1|28962|osteopetrosis associated transmembrane protein 1##BC068581|OSTM1|28962|osteopetrosis associated transmembrane protein 1##NM_003269|NR2E1|7101|nuclear receptor subfamily 2, group E, member 1##AF220532|NR2E1|7101|nuclear receptor subfamily 2, group E, member 1##BT007114|SNX3|8724|sorting nexin 3##CR456898|SNX3|8724|sorting nexin 3##EU831975|SNX3|8724|sorting nexin 3##EU832068|SNX3|8724|sorting nexin 3##AF062483|SNX3|8724|sorting nexin 3##AB047360|SNX3|8724|sorting nexin 3##AF034546|SNX3|8724|sorting nexin 3##BC008444|SNX3|8724|sorting nexin 3	0.039294	
chr6	21360638	21360776	reg1034781.p2	3.520	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-825984	+	CR749285 NM_001243076	-956674	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-958604	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	233665	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	305952	+	BC015850 NM_000948	937022	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.030432	
chr7	5526837	5527017	reg1000527.p3	3.520	+	NM_001080495	-63751	-	AY129022 TSC_hg19_v1_chr7_-_5461555	-65386	-	TSC_hg19_v1_chr7_-_5460842 BC140723	-66021	-	CU692902 TSC_hg19_v1_chr7_-_5553380 AK057042 BC006426 BC024256 NM_024963	26424	-	TSC_hg19_v1_chr7_-_5553435 AK130444 AK294949	26500	-	M28424 V00478 TSC_hg19_v1_chr7_-_5567980 HQ154074 DQ407611 EF036500	41085	-	NM_001080495|TNRC18|84629|trinucleotide repeat containing 18##AY129022|TNRC18|84629|trinucleotide repeat containing 18##AK057042|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC006426|FBXL18|80028|F-box and leucine-rich repeat protein 18##BC024256|FBXL18|80028|F-box and leucine-rich repeat protein 18##NM_024963|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK130444|FBXL18|80028|F-box and leucine-rich repeat protein 18##AK294949|FBXL18|80028|F-box and leucine-rich repeat protein 18##M28424|ACTB|60|actin, beta##V00478|ACTB|60|actin, beta##DQ407611|ACTB|60|actin, beta##EF036500|ACTB|60|actin, beta	0.0	
chr9	136792290	136792427	reg1037569.p2	3.520	+	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-187372	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-188880	-	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-290850	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	65088	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	140835	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	141268	-	BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3	0.0	
chr9	14769304	14769404	reg1013315.p2	3.520	+	AF400435 BC069371 BC069405 BC069491 BC069503 BC103976 BC103977 CU686794 CU686860 NM_005454	-46663	-	TSC_hg19_v1_chr9_-_14693475 BC042558 NM_178566	-75885	-	AF161360 TSC_hg19_v1_chr9_-_14693311 AK292960	-76034	-	BC031064 NM_001177704	10176	-	AB160987 TSC_hg19_v1_chr9_-_14869016	99645	-	BX537574 NM_144966	141638	-	AF400435|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069371|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069405|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069491|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC069503|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC103976|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC103977|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##NM_005454|CER1|9350|cerberus 1, cysteine knot superfamily, homolog (Xenopus laevis)##BC042558|ZDHHC21|340481|zinc finger, DHHC-type containing 21##NM_178566|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AF161360|ZDHHC21|340481|zinc finger, DHHC-type containing 21##AK292960|ZDHHC21|340481|zinc finger, DHHC-type containing 21##BC031064|FREM1|158326|FRAS1 related extracellular matrix 1##NM_001177704|FREM1|158326|FRAS1 related extracellular matrix 1##AB160987|FREM1|158326|FRAS1 related extracellular matrix 1##BX537574|FREM1|158326|FRAS1 related extracellular matrix 1##NM_144966|FREM1|158326|FRAS1 related extracellular matrix 1	0.0	
chrX	13003255	13003408	reg1037372.p1	3.520	+	TSC_hg19_v1_chrX_+_12994293 BC104464 BC104465 BT007090 X02493	-8988	+	BC107789 NM_021109 M17733 AK055976 AK057827 AK311747 BC016732 BC022857 BC062436 BC070248 BC070249 BC083509 BC092437 BC104666 BC061586 BC151215 BC139925 BC101790 BC101792 BC001631 BC064954 BC128103 BC141975 BC141976 BC128102	-10091	+	AK314240 NM_138636 AF246971 AY358296 BC101074 BC101075 BC101076 BC101077 AF245703	-78574	+	BX647580 AK313776 AF494345 BX648111 BX648919 NM_174901	59487	-	AB050195 TSC_hg19_v1_chrX_-_13338140 BC137186 BC137187	334807	-	AK302365 NM_001135995	335186	-	BC104464|TMSB4X|7114|thymosin beta 4, X-linked##BC104465|TMSB4X|7114|thymosin beta 4, X-linked##BT007090|TMSB4X|7114|thymosin beta 4, X-linked##X02493|TMSB4X|7114|thymosin beta 4, X-linked##BC107789|TMSB4X|7114|thymosin beta 4, X-linked##NM_021109|TMSB4X|7114|thymosin beta 4, X-linked##M17733|TMSB4X|7114|thymosin beta 4, X-linked##AK055976|TMSB4X|7114|thymosin beta 4, X-linked##AK057827|TMSB4X|7114|thymosin beta 4, X-linked##AK311747|TMSB4X|7114|thymosin beta 4, X-linked##BC016732|TMSB4X|7114|thymosin beta 4, X-linked##BC022857|TMSB4X|7114|thymosin beta 4, X-linked##BC062436|TMSB4X|7114|thymosin beta 4, X-linked##BC070248|TMSB4X|7114|thymosin beta 4, X-linked##BC070249|TMSB4X|7114|thymosin beta 4, X-linked##BC083509|TMSB4X|7114|thymosin beta 4, X-linked##BC092437|TMSB4X|7114|thymosin beta 4, X-linked##BC104666|TMSB4X|7114|thymosin beta 4, X-linked##BC061586|TMSB4X|7114|thymosin beta 4, X-linked##BC151215|TMSB4X|7114|thymosin beta 4, X-linked##BC139925|TMSB4X|7114|thymosin beta 4, X-linked##BC101790|TMSB4X|7114|thymosin beta 4, X-linked##BC101792|TMSB4X|7114|thymosin beta 4, X-linked##BC001631|TMSB4X|7114|thymosin beta 4, X-linked##BC064954|TMSB4X|7114|thymosin beta 4, X-linked##BC128103|TMSB4X|7114|thymosin beta 4, X-linked##BC141975|TMSB4X|7114|thymosin beta 4, X-linked##BC141976|TMSB4X|7114|thymosin beta 4, X-linked##BC128102|TMSB4X|7114|thymosin beta 4, X-linked##AK314240|TLR8|51311|toll-like receptor 8##NM_138636|TLR8|51311|toll-like receptor 8##AF246971|TLR8|51311|toll-like receptor 8##AY358296|TLR8|51311|toll-like receptor 8##BC101074|TLR8|51311|toll-like receptor 8##BC101075|TLR8|51311|toll-like receptor 8##BC101076|TLR8|51311|toll-like receptor 8##BC101077|TLR8|51311|toll-like receptor 8##AF245703|TLR8|51311|toll-like receptor 8##BX647580|FAM9C|171484|family with sequence similarity 9, member C##AK313776|FAM9C|171484|family with sequence similarity 9, member C##AF494345|FAM9C|171484|family with sequence similarity 9, member C##BX648111|FAM9C|171484|family with sequence similarity 9, member C##BX648919|FAM9C|171484|family with sequence similarity 9, member C##NM_174901|FAM9C|171484|family with sequence similarity 9, member C##AB050195|ATXN3L|92552|ataxin 3-like##BC137186|ATXN3L|92552|ataxin 3-like##BC137187|ATXN3L|92552|ataxin 3-like##AK302365|ATXN3L|92552|ataxin 3-like##NM_001135995|ATXN3L|92552|ataxin 3-like	0.0	
chrX	153639674	153639772	reg1041352.p2	3.520	+	AY927624 BC001561 U06846 NM_006730 BC028092	-2165	-	NM_006013 TSC_hg19_v1_chrX_+_153626717 AK026568 AK130582 D28410 M64241 AK307511 BC026276 BX647954 AK027197 BC095425 AF218023 BC003358 BC071918 S35960 M73791 AF486812 BC063422 AB528224 AM393337 CR456797 CR542069 DQ369703 DQ369704 DQ369705 DQ369706 DQ369707 DQ369708 DQ369709 DQ369710 DQ369711 DQ369712 DQ369713 DQ369714 DQ369715 DQ369716	-13008	+	BC000738 TSC_hg19_v1_chrX_+_153607746 X82434 AB463603 CU674378 AM393723 BT007401 CR536536	-31940	+	TSC_hg19_v1_chrX_+_153639881 NM_000116 NM_181311 NM_181312 NM_181313 X92762 BC005062 AK291848 BC011515 AY231461 AY231462 AY231463 AY231464 AY258036 AY258037 AY258038 AY258039 AM392997 AM393205 DQ884408	301	+	X90393 L40823 NM_001009932 NM_001009933 NM_001009934 TSC_hg19_v1_chrX_-_153640439	682	-	NM_001183 TSC_hg19_v1_chrX_+_153657022 AK289452 AK075284 AK301603 BC000724 AK130616	17277	+	BC001561|DNASE1L1|1774|deoxyribonuclease I-like 1##U06846|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_006730|DNASE1L1|1774|deoxyribonuclease I-like 1##BC028092|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_006013|RPL10|6134|ribosomal protein L10##AK026568|RPL10|6134|ribosomal protein L10##AK130582|RPL10|6134|ribosomal protein L10##D28410|RPL10|6134|ribosomal protein L10##M64241|RPL10|6134|ribosomal protein L10##AK307511|RPL10|6134|ribosomal protein L10##BC026276|RPL10|6134|ribosomal protein L10##BX647954|RPL10|6134|ribosomal protein L10##AK027197|RPL10|6134|ribosomal protein L10##BC095425|RPL10|6134|ribosomal protein L10##AF218023|RPL10|6134|ribosomal protein L10##BC003358|RPL10|6134|ribosomal protein L10##BC071918|RPL10|6134|ribosomal protein L10##S35960|RPL10|6134|ribosomal protein L10##M73791|RPL10|6134|ribosomal protein L10##AF486812|RPL10|6134|ribosomal protein L10##AM393337|RPL10|6134|ribosomal protein L10##CR456797|RPL10|6134|ribosomal protein L10##CR542069|RPL10|6134|ribosomal protein L10##DQ369703|RPL10|6134|ribosomal protein L10##DQ369704|RPL10|6134|ribosomal protein L10##DQ369705|RPL10|6134|ribosomal protein L10##DQ369706|RPL10|6134|ribosomal protein L10##DQ369707|RPL10|6134|ribosomal protein L10##DQ369708|RPL10|6134|ribosomal protein L10##DQ369709|RPL10|6134|ribosomal protein L10##DQ369710|RPL10|6134|ribosomal protein L10##DQ369711|RPL10|6134|ribosomal protein L10##DQ369712|RPL10|6134|ribosomal protein L10##DQ369713|RPL10|6134|ribosomal protein L10##DQ369714|RPL10|6134|ribosomal protein L10##DQ369715|RPL10|6134|ribosomal protein L10##DQ369716|RPL10|6134|ribosomal protein L10##BC000738|EMD|2010|emerin##X82434|EMD|2010|emerin##AM393723|EMD|2010|emerin##BT007401|EMD|2010|emerin##CR536536|EMD|2010|emerin##NM_000116|TAZ|6901|tafazzin##NM_181311|TAZ|6901|tafazzin##NM_181312|TAZ|6901|tafazzin##NM_181313|TAZ|6901|tafazzin##X92762|TAZ|6901|tafazzin##BC005062|TAZ|6901|tafazzin##AK291848|TAZ|6901|tafazzin##BC011515|TAZ|6901|tafazzin##AY231461|TAZ|6901|tafazzin##AY231462|TAZ|6901|tafazzin##AY231463|TAZ|6901|tafazzin##AY231464|TAZ|6901|tafazzin##AY258036|TAZ|6901|tafazzin##AY258037|TAZ|6901|tafazzin##AY258038|TAZ|6901|tafazzin##AY258039|TAZ|6901|tafazzin##AM392997|TAZ|6901|tafazzin##AM393205|TAZ|6901|tafazzin##DQ884408|TAZ|6901|tafazzin##X90393|DNASE1L1|1774|deoxyribonuclease I-like 1##L40823|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_001009932|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_001009933|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_001009934|DNASE1L1|1774|deoxyribonuclease I-like 1##NM_001183|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1##AK289452|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1##AK075284|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1##AK301603|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1##BC000724|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1##AK130616|ATP6AP1|537|ATPase, H+ transporting, lysosomal accessory protein 1	0.0	
chr13	52377727	52377908	reg1036878.p1	3.519	+	TSC_hg19_v1_chr13_+_52158648 AF411978 CU680736	-219082	+	TSC_hg19_v1_chr13_+_52158639 BC014004	-219176	+	AK309815 TSC_hg19_v1_chr13_+_52158630	-219184	+	BC026024 BC009825 NM_001031719 TSC_hg19_v1_chr13_-_52378300 AK023701 NM_024705	458	-	AK098719 NM_031290 AK225745 AL136887 BC069691 BC069748 BC069770 BC069806	58377	+	DQ015922 U03464 BC143974 BC143973 BC117200 BC143975 BC143976 NM_000053 NM_001005918 NM_001243182 U11700	207733	-	AF411978|WDFY2|115825|WD repeat and FYVE domain containing 2##BC014004|WDFY2|115825|WD repeat and FYVE domain containing 2##AK309815|WDFY2|115825|WD repeat and FYVE domain containing 2##BC026024|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##BC009825|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_001031719|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK023701|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##NM_024705|DHRS12|79758|dehydrogenase/reductase (SDR family) member 12##AK098719|CCDC70|83446|coiled-coil domain containing 70##NM_031290|CCDC70|83446|coiled-coil domain containing 70##AK225745|CCDC70|83446|coiled-coil domain containing 70##AL136887|CCDC70|83446|coiled-coil domain containing 70##BC069691|CCDC70|83446|coiled-coil domain containing 70##BC069748|CCDC70|83446|coiled-coil domain containing 70##BC069770|CCDC70|83446|coiled-coil domain containing 70##BC069806|CCDC70|83446|coiled-coil domain containing 70##DQ015922|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U03464|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143974|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143973|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC117200|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143975|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##BC143976|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_000053|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001005918|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##NM_001243182|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide##U11700|ATP7B|540|ATPase, Cu++ transporting, beta polypeptide	0.0	
chr15	57933287	57933362	reg1038225.p1	3.519	+	BC101645 NM_001018090 NM_001018091 NM_001018100 NM_152451 BC112148 AK055535 FJ970029 AY207007 AY207459 AY208913 AY237639 AY331564 AY333779 AY334560 AY334561 AY334562 AY341345 AY353057 AY353058 AY353060	-49159	+	AK056673 AK307410 NM_001252335 NM_032866 TSC_hg19_v1_chr15_+_57668732 AY274808 BC030995 AY610514	-264607	+	TSC_hg19_v1_chr15_+_57511630 AK294991 AK304007 AK311359 AK308101 NM_207040 BX537967 AM393573	-421657	+	TSC_hg19_v1_chr15_+_57998911 AY339380 AY341344 NM_001018102 NM_015532 AK074767 AK074955	65562	+	AK223571 TSC_hg19_v1_chr15_+_57998921 AK128618 AK308873 BC001510 AY353061 AF326773 AB587477 AM392721 DQ893035 DQ896276	65656	+	AB015228 AB015227 NM_170697	372915	-	BC101645|MYZAP|100820829|myocardial zonula adherens protein##NM_001018090|GCOM1|145781|GRINL1A complex locus 1##NM_001018091|GCOM1|145781|GRINL1A complex locus 1##NM_001018100|MYZAP|100820829|myocardial zonula adherens protein##NM_152451|MYZAP|100820829|myocardial zonula adherens protein##BC112148|MYZAP|100820829|myocardial zonula adherens protein##AK055535|MYZAP|100820829|myocardial zonula adherens protein##FJ970029|MYZAP|100820829|myocardial zonula adherens protein##AY207007|GCOM1|145781|GRINL1A complex locus 1##AY207459|MYZAP|100820829|myocardial zonula adherens protein##AY208913|GCOM1|145781|GRINL1A complex locus 1##AY237639|MYZAP|100820829|myocardial zonula adherens protein##AY331564|GCOM1|145781|GRINL1A complex locus 1##AY333779|GCOM1|145781|GRINL1A complex locus 1##AY334560|GCOM1|145781|GRINL1A complex locus 1##AY334561|GCOM1|145781|GRINL1A complex locus 1##AY334562|GCOM1|145781|GRINL1A complex locus 1##AY341345|GCOM1|145781|GRINL1A complex locus 1##AY353057|GCOM1|145781|GRINL1A complex locus 1##AY353058|GCOM1|145781|GRINL1A complex locus 1##AY353060|GCOM1|145781|GRINL1A complex locus 1##AK056673|CGNL1|84952|cingulin-like 1##AK307410|CGNL1|84952|cingulin-like 1##NM_001252335|CGNL1|84952|cingulin-like 1##NM_032866|CGNL1|84952|cingulin-like 1##AY274808|CGNL1|84952|cingulin-like 1##BC030995|CGNL1|84952|cingulin-like 1##AY610514|CGNL1|84952|cingulin-like 1##AK294991|TCF12|6938|transcription factor 12##AK304007|TCF12|6938|transcription factor 12##AK311359|TCF12|6938|transcription factor 12##AK308101|TCF12|6938|transcription factor 12##NM_207040|TCF12|6938|transcription factor 12##BX537967|TCF12|6938|transcription factor 12##AM393573|TCF12|6938|transcription factor 12##AY339380|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY341344|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_001018102|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##NM_015532|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074767|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK074955|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK223571|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK128618|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AK308873|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##BC001510|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AY353061|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AF326773|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AM392721|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ893035|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##DQ896276|POLR2M|81488|polymerase (RNA) II (DNA directed) polypeptide M##AB015228|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015227|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170697|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2	0.0	
chr1	59249638	59249743	reg1036656.p2	3.519	+	TSC_hg19_v1_chr1_-_59248287 BC009874	-1325	-	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-83938	-	TSC_hg19_v1_chr1_-_59147727 BC017579	-101944	-	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	45	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	512922	+	NM_001244714 AK054842	526063	+	BC009874|JUN|3725|jun proto-oncogene##BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing	0.0	
chr17	70116786	70116859	reg1027503.p2	3.519	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-1951126	+	BC033038 NM_170742	-2015828	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-2045392	+	TSC_hg19_v1_chr17_-_70116937 AL833139	116	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	337	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	348	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.0	
chr19	41304413	41304583	reg1023420.p2	3.519	+	TSC_hg19_v1_chr19_+_41284175 BC046927 AK291385 AF165522 BC033081 CU692346 EU832633 EU832708 AF498935	-20278	+	TSC_hg19_v1_chr19_+_41284141 NM_016154	-20394	+	NM_006533 X75450 BC005910 BT007044 CR541648	-23134	+	TSC_hg19_v1_chr19_+_41305091 NM_080732 AL832506	568	+	TSC_hg19_v1_chr19_+_41305105 AK074408 BC001723	625	+	NM_053046 BC036051 AK098182	893	+	BC046927|RAB4B|53916|RAB4B, member RAS oncogene family##AK291385|RAB4B-EGLN2|100529264|RAB4B-EGLN2 readthrough##AF165522|RAB4B|53916|RAB4B, member RAS oncogene family##BC033081|RAB4B|53916|RAB4B, member RAS oncogene family##EU832633|RAB4B|53916|RAB4B, member RAS oncogene family##EU832708|RAB4B|53916|RAB4B, member RAS oncogene family##AF498935|RAB4B|53916|RAB4B, member RAS oncogene family##NM_016154|RAB4B|53916|RAB4B, member RAS oncogene family##NM_006533|MIA|8190|melanoma inhibitory activity##X75450|MIA|8190|melanoma inhibitory activity##BC005910|MIA|8190|melanoma inhibitory activity##BT007044|MIA|8190|melanoma inhibitory activity##CR541648|MIA|8190|melanoma inhibitory activity##NM_080732|EGLN2|112398|egl nine homolog 2 (C. elegans)##AL832506|EGLN2|112398|egl nine homolog 2 (C. elegans)##AK074408|EGLN2|112398|egl nine homolog 2 (C. elegans)##BC001723|EGLN2|112398|egl nine homolog 2 (C. elegans)##NM_053046|EGLN2|112398|egl nine homolog 2 (C. elegans)##BC036051|EGLN2|112398|egl nine homolog 2 (C. elegans)##AK098182|EGLN2|112398|egl nine homolog 2 (C. elegans)	0.0	
chr20	5591065	5591182	reg1024257.p2	3.519	+	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-296087	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-483428	+	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	-483601	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	464	-	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	139943	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	301003	+	AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)	0.0	
chr2	114723358	114723446	reg1028865.p1	3.519	+	AB209353 TSC_hg19_v1_chr2_+_114674521	-48889	+	TSC_hg19_v1_chr2_+_114647862 AB527566 CU692216	-75552	+	TSC_hg19_v1_chr2_+_114647707 AK312659	-75694	+	BC030832 NM_020868	476496	+	AK055256 BC038514 NM_001178036	495764	+	NM_001178037 DQ857321	1098888	+	AB209353|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##AK312659|ACTR3|10096|ARP3 actin-related protein 3 homolog (yeast)##BC030832|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_020868|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##AK055256|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##BC038514|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178036|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##NM_001178037|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)##DQ857321|DPP10|57628|dipeptidyl-peptidase 10 (non-functional)	0.382284	CTCF.p2:15:0.382
chr2	128210782	128210848	reg1016601.p1	3.519	+	TSC_hg19_v1_chr2_+_128176019 BC034377	-34789	+	TSC_hg19_v1_chr2_+_128176007 NM_000312 AK298449 AK303773 AK298280 AK298454 X02750	-34813	+	AF234262 AF239798 BC136293 AF111105 NM_006609	-110077	-	BC065279 BC110536 BC110537 TSC_hg19_v1_chr2_-_128284054 AK000868 AL834178 AK296848 AK027561 AK295970 AK309006 AK056881 AK294669 NM_017969	73150	-	TSC_hg19_v1_chr2_+_128293312 NM_001080527	82529	+	NM_001161415 NM_001161416 NM_001161417 NM_005291 AK292725 BX538082 BC013202 Z94154 Y12546 BC031653	192783	+	BC034377|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##NM_000312|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298449|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK303773|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298280|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AK298454|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##X02750|PROC|5624|protein C (inactivator of coagulation factors Va and VIIIa)##AF239798|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##BC136293|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##AF111105|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##NM_006609|MAP3K2|10746|mitogen-activated protein kinase kinase kinase 2##BC065279|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110536|IWS1|55677|IWS1 homolog (S. cerevisiae)##BC110537|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK000868|IWS1|55677|IWS1 homolog (S. cerevisiae)##AL834178|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK296848|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK027561|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK295970|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK309006|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK056881|IWS1|55677|IWS1 homolog (S. cerevisiae)##AK294669|IWS1|55677|IWS1 homolog (S. cerevisiae)##NM_017969|IWS1|55677|IWS1 homolog (S. cerevisiae)##NM_001080527|MYO7B|4648|myosin VIIB##NM_001161415|GPR17|2840|G protein-coupled receptor 17##NM_001161416|GPR17|2840|G protein-coupled receptor 17##NM_001161417|GPR17|2840|G protein-coupled receptor 17##NM_005291|GPR17|2840|G protein-coupled receptor 17##AK292725|GPR17|2840|G protein-coupled receptor 17##BX538082|GPR17|2840|G protein-coupled receptor 17##BC013202|GPR17|2840|G protein-coupled receptor 17##Z94154|GPR17|2840|G protein-coupled receptor 17##Y12546|GPR17|2840|G protein-coupled receptor 17##BC031653|GPR17|2840|G protein-coupled receptor 17	0.0	
chr2	216005062	216005178	reg1043207.p1	3.519	+	BC144073 AY219711 NM_173076	-2011	-	AY033486 NM_015657	-108311	-	AB590656 JF790283 JF790285 JF790287 TSC_hg19_v1_chr2_-_215674408 BC126426 BC126428 AX794378 JF790280 JF790281 JF790282 JF790284 U76638 AK314260 AK301843 JF790286 AK223409 NM_000465	-330761	-	NM_004044 TSC_hg19_v1_chr2_+_216176781 AK313066 D82348 AK298142	171618	+	D89976 TSC_hg19_v1_chr2_+_216176813	171692	+	TSC_hg19_v1_chr2_+_216176824 AB062403 BC008879 AB590190 DQ893262 DQ896591 CU679167	171721	+	BC144073|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##AY219711|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_173076|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##AY033486|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##NM_015657|ABCA12|26154|ATP-binding cassette, sub-family A (ABC1), member 12##JF790283|BARD1|580|BRCA1 associated RING domain 1##JF790285|BARD1|580|BRCA1 associated RING domain 1##JF790287|BARD1|580|BRCA1 associated RING domain 1##BC126426|BARD1|580|BRCA1 associated RING domain 1##BC126428|BARD1|580|BRCA1 associated RING domain 1##AX794378|BARD1|580|BRCA1 associated RING domain 1##JF790280|BARD1|580|BRCA1 associated RING domain 1##JF790281|BARD1|580|BRCA1 associated RING domain 1##JF790282|BARD1|580|BRCA1 associated RING domain 1##JF790284|BARD1|580|BRCA1 associated RING domain 1##U76638|BARD1|580|BRCA1 associated RING domain 1##AK314260|BARD1|580|BRCA1 associated RING domain 1##AK301843|BARD1|580|BRCA1 associated RING domain 1##JF790286|BARD1|580|BRCA1 associated RING domain 1##AK223409|BARD1|580|BRCA1 associated RING domain 1##NM_000465|BARD1|580|BRCA1 associated RING domain 1##NM_004044|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK313066|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##D82348|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK298142|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##D89976|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AB062403|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##BC008879|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##DQ893262|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##DQ896591|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase	0.182011	
chr3	195357516	195357609	reg1037183.p2	3.519	+	TSC_hg19_v1_chr3_-_195310989 NM_001647	-46532	-	J02611 BC007402 TSC_hg19_v1_chr3_-_195310812 AK312090 AK294523	-46732	-	TSC_hg19_v1_chr3_-_195306274 BT019860 BT019861 CR456838 CR541773 CU675645 DQ892668 DQ896124	-51260	-	BC053551 TSC_hg19_v1_chr3_+_195384934 BC062438 AK299148 AK057553 AK316025	27367	+	TSC_hg19_v1_chr3_+_195384941 BC073879 AK300421 BC064564 AK074764	27392	+	TSC_hg19_v1_chr3_+_195447752 NM_152673 AK311504	90193	+	NM_001647|APOD|347|apolipoprotein D##J02611|APOD|347|apolipoprotein D##BC007402|APOD|347|apolipoprotein D##AK312090|APOD|347|apolipoprotein D##AK294523|APOD|347|apolipoprotein D##BT019860|APOD|347|apolipoprotein D##BT019861|APOD|347|apolipoprotein D##CR456838|APOD|347|apolipoprotein D##CR541773|APOD|347|apolipoprotein D##DQ892668|APOD|347|apolipoprotein D##DQ896124|APOD|347|apolipoprotein D##BC053551|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##BC062438|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK299148|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AK057553|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK316025|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##BC073879|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##BC064564|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK074764|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##NM_152673|MUC20|200958|mucin 20, cell surface associated##AK311504|MUC20|200958|mucin 20, cell surface associated	0.355712	CTCF.p2:-4:0.356
chr4	84283793	84283915	reg1039939.p2	3.519	+	AF155510 BC051321 FJ517659 FJ517660 GQ337901 GQ337902 HM187643 NM_001166498 NM_006665	-27550	-	TSC_hg19_v1_chr4_-_84256033 AF144325 NM_001098540	-27798	-	AK222986 TSC_hg19_v1_chr4_-_84255999	-27855	-	BC095473 BC011863 BC065814 BC111502 TSC_hg19_v1_chr4_-_84376999 AK308395 AF436845 AK312725 AK128665 BC015428 NM_133636	93129	-	AK026620 NM_016067 AF151892 BC005186 TSC_hg19_v1_chr4_+_84377213 AK002008 CU675033	93319	+	BC016905 TSC_hg19_v1_chr4_-_84406254 EF531340 BC039573 AY358576 AK022704 AK023676 NM_139076	122420	-	AF155510|HPSE|10855|heparanase##BC051321|HPSE|10855|heparanase##FJ517659|HPSE|10855|heparanase##FJ517660|HPSE|10855|heparanase##GQ337901|HPSE|10855|heparanase##GQ337902|HPSE|10855|heparanase##HM187643|HPSE|10855|heparanase##NM_001166498|HPSE|10855|heparanase##NM_006665|HPSE|10855|heparanase##AF144325|HPSE|10855|heparanase##NM_001098540|HPSE|10855|heparanase##AK222986|HPSE|10855|heparanase##BC095473|HELQ|113510|helicase, POLQ-like##BC011863|HELQ|113510|helicase, POLQ-like##BC065814|HELQ|113510|helicase, POLQ-like##BC111502|HELQ|113510|helicase, POLQ-like##AK308395|HELQ|113510|helicase, POLQ-like##AF436845|HELQ|113510|helicase, POLQ-like##AK312725|HELQ|113510|helicase, POLQ-like##AK128665|HELQ|113510|helicase, POLQ-like##BC015428|HELQ|113510|helicase, POLQ-like##NM_133636|HELQ|113510|helicase, POLQ-like##AK026620|MRPS18C|51023|mitochondrial ribosomal protein S18C##NM_016067|MRPS18C|51023|mitochondrial ribosomal protein S18C##AF151892|MRPS18C|51023|mitochondrial ribosomal protein S18C##BC005186|MRPS18C|51023|mitochondrial ribosomal protein S18C##AK002008|MRPS18C|51023|mitochondrial ribosomal protein S18C##BC016905|FAM175A|84142|family with sequence similarity 175, member A##EF531340|FAM175A|84142|family with sequence similarity 175, member A##BC039573|FAM175A|84142|family with sequence similarity 175, member A##AY358576|FAM175A|84142|family with sequence similarity 175, member A##AK022704|FAM175A|84142|family with sequence similarity 175, member A##AK023676|FAM175A|84142|family with sequence similarity 175, member A##NM_139076|FAM175A|84142|family with sequence similarity 175, member A	0.067333	
chr5	156679921	156680102	reg1008482.p1	3.519	+	BC094701 AB209622 D13720 NM_005546 BC109077 BC109078 AK312846 AK303609 AB590549	-72094	+	AY973323 CU692472 AF465821 BC025397 AK057543 BC022035 BC025409 BC025998 NM_130899	-86783	-	NM_001100816 TSC_hg19_v1_chr5_-_156569881 AK123613 AF031383 BC005250 BC006968 AK308393 NM_004270	-110159	-	TSC_hg19_v1_chr5_+_156693105 AL136549 NM_001037333 AK294220 AK295865 AK297401 AK303702 AB032994 AF160973 NM_001037332	13241	+	BC011762 BC021008 NM_014376	16345	+	AK289701 BC022570 NM_001001343	92689	-	AB209622|ITK|3702|IL2-inducible T-cell kinase##D13720|ITK|3702|IL2-inducible T-cell kinase##NM_005546|ITK|3702|IL2-inducible T-cell kinase##BC109077|ITK|3702|IL2-inducible T-cell kinase##BC109078|ITK|3702|IL2-inducible T-cell kinase##AK312846|ITK|3702|IL2-inducible T-cell kinase##AK303609|ITK|3702|IL2-inducible T-cell kinase##AY973323|FAM71B|153745|family with sequence similarity 71, member B##AF465821|FAM71B|153745|family with sequence similarity 71, member B##BC025397|FAM71B|153745|family with sequence similarity 71, member B##AK057543|FAM71B|153745|family with sequence similarity 71, member B##BC022035|FAM71B|153745|family with sequence similarity 71, member B##BC025409|FAM71B|153745|family with sequence similarity 71, member B##BC025998|FAM71B|153745|family with sequence similarity 71, member B##NM_130899|FAM71B|153745|family with sequence similarity 71, member B##NM_001100816|MED7|9443|mediator complex subunit 7##AF031383|MED7|9443|mediator complex subunit 7##BC005250|MED7|9443|mediator complex subunit 7##BC006968|MED7|9443|mediator complex subunit 7##AK308393|MED7|9443|mediator complex subunit 7##NM_004270|MED7|9443|mediator complex subunit 7##AL136549|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037333|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK294220|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK295865|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK297401|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK303702|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AB032994|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AF160973|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_001037332|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC011762|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##BC021008|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##NM_014376|CYFIP2|26999|cytoplasmic FMR1 interacting protein 2##AK289701|FNDC9|408263|fibronectin type III domain containing 9##BC022570|FNDC9|408263|fibronectin type III domain containing 9##NM_001001343|FNDC9|408263|fibronectin type III domain containing 9	0.0	
chr5	64468565	64468745	reg1026524.p2	3.519	+	BX647971 TSC_hg19_v1_chr5_+_64064766 NM_005869 AK225161 AK225105 AK308223 AK312954 AY358569 AF039692 BC012117	-403871	+	TSC_hg19_v1_chr5_-_64064491 AK094073 AX748442 NM_173829	-404151	-	TSC_hg19_v1_chr5_-_64064453 BC047006 BC108716 BC127085 BC127086 HM370403 AL832348	-404209	-	AY692424 NM_197941 AY692422	309069	-	TSC_hg19_v1_chr5_-_64858996 AF315941 BC005400 BC008504 NM_022145	390309	-	TSC_hg19_v1_chr5_+_64859122 AK025679 AK093675 AK300022 AK298175 AK301654 NM_015342 BC015385 AB384434 CU677289 GQ129262 GQ129263 D38552	390463	+	BX647971|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##NM_005869|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225161|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK225105|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK308223|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK312954|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AY358569|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AF039692|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##BC012117|CWC27|10283|CWC27 spliceosome-associated protein homolog (S. cerevisiae)##AK094073|SREK1IP1|285672|SREK1-interacting protein 1##NM_173829|SREK1IP1|285672|SREK1-interacting protein 1##BC047006|SREK1IP1|285672|SREK1-interacting protein 1##BC108716|SREK1IP1|285672|SREK1-interacting protein 1##BC127085|SREK1IP1|285672|SREK1-interacting protein 1##BC127086|SREK1IP1|285672|SREK1-interacting protein 1##AL832348|SREK1IP1|285672|SREK1-interacting protein 1##AY692424|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##NM_197941|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AY692422|ADAMTS6|11174|ADAM metallopeptidase with thrombospondin type 1 motif, 6##AF315941|CENPK|64105|centromere protein K##BC005400|CENPK|64105|centromere protein K##BC008504|CENPK|64105|centromere protein K##NM_022145|CENPK|64105|centromere protein K##AK025679|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK300022|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK298175|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##AK301654|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##NM_015342|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##BC015385|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129262|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##GQ129263|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1##D38552|PPWD1|23398|peptidylprolyl isomerase domain and WD repeat containing 1	0.0	
chr5	88593173	88593316	reg1033841.p2	3.519	+	AL833268 AL833274 NM_001131005 NM_001193347	-393350	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-407980	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-408124	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	1112295	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1176938	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1177334	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr7	46024374	46024485	reg1037362.p1	3.519	+	DQ884396 DQ884397 DQ884398 AB590345 DQ895344 BC018962 BC000013 M31159 BC064987 TSC_hg19_v1_chr7_-_45960872 AK075483 AK095991 AK123735 AK055632 AK056274 AK091706 AK091745 AK092447 AK095408 AK095864 AK095869 AK095900 AK095907 AK095974 AK097201 AK122873 AK125224 AK127537 AK129951 AK130884 AK297767 AK298143 AK315668 AX747551 NM_000598 NM_001013398 X64875	-63623	-	AF042356 TSC_hg19_v1_chr7_+_45933167	-91295	+	NM_000596 TSC_hg19_v1_chr7_+_45928086 AK314925 BC057806 M31145 BC035263 X12385 M20841 X13405 Y00856 BT019685 FJ795026	-96324	+	TSC_hg19_v1_chr7_-_47579207 BC071791	1554780	-	TSC_hg19_v1_chr7_-_47621681 CR749644	1597234	-	AK092864 AX747776 NM_022748 TSC_hg19_v1_chr7_-_47621743	1597354	-	DQ884396|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884397|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ884398|IGFBP3|3486|insulin-like growth factor binding protein 3##DQ895344|IGFBP3|3486|insulin-like growth factor binding protein 3##BC018962|IGFBP3|3486|insulin-like growth factor binding protein 3##BC000013|IGFBP3|3486|insulin-like growth factor binding protein 3##M31159|IGFBP3|3486|insulin-like growth factor binding protein 3##BC064987|IGFBP3|3486|insulin-like growth factor binding protein 3##AK075483|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095991|IGFBP3|3486|insulin-like growth factor binding protein 3##AK123735|IGFBP3|3486|insulin-like growth factor binding protein 3##AK055632|IGFBP3|3486|insulin-like growth factor binding protein 3##AK056274|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091706|IGFBP3|3486|insulin-like growth factor binding protein 3##AK091745|IGFBP3|3486|insulin-like growth factor binding protein 3##AK092447|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095408|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095864|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095869|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095900|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095907|IGFBP3|3486|insulin-like growth factor binding protein 3##AK095974|IGFBP3|3486|insulin-like growth factor binding protein 3##AK097201|IGFBP3|3486|insulin-like growth factor binding protein 3##AK122873|IGFBP3|3486|insulin-like growth factor binding protein 3##AK125224|IGFBP3|3486|insulin-like growth factor binding protein 3##AK127537|IGFBP3|3486|insulin-like growth factor binding protein 3##AK129951|IGFBP3|3486|insulin-like growth factor binding protein 3##AK130884|IGFBP3|3486|insulin-like growth factor binding protein 3##AK297767|IGFBP3|3486|insulin-like growth factor binding protein 3##AK298143|IGFBP3|3486|insulin-like growth factor binding protein 3##AK315668|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000598|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_001013398|IGFBP3|3486|insulin-like growth factor binding protein 3##X64875|IGFBP3|3486|insulin-like growth factor binding protein 3##NM_000596|IGFBP1|3484|insulin-like growth factor binding protein 1##AK314925|IGFBP1|3484|insulin-like growth factor binding protein 1##BC057806|IGFBP1|3484|insulin-like growth factor binding protein 1##M31145|IGFBP1|3484|insulin-like growth factor binding protein 1##BC035263|IGFBP1|3484|insulin-like growth factor binding protein 1##X12385|IGFBP1|3484|insulin-like growth factor binding protein 1##M20841|IGFBP1|3484|insulin-like growth factor binding protein 1##X13405|IGFBP1|3484|insulin-like growth factor binding protein 1##Y00856|IGFBP1|3484|insulin-like growth factor binding protein 1##BT019685|IGFBP1|3484|insulin-like growth factor binding protein 1##FJ795026|IGFBP1|3484|insulin-like growth factor binding protein 1##BC071791|TNS3|64759|tensin 3##CR749644|TNS3|64759|tensin 3##AK092864|TNS3|64759|tensin 3##NM_022748|TNS3|64759|tensin 3	0.86175	CTCF.p2:11:0.862
chr7	62092494	62092592	reg1042427.p1	3.519	+	AK131575 NM_001159279	-4582661	+	AF277624 NM_033273	-4884973	-	Y10275 TSC_hg19_v1_chr7_-_56184079 BC043523 NM_001145712	-5908500	-	NM_001159522	1413277	+	NM_001159524	1575037	+	BC033523 NM_153363	1596308	+	AK131575|ZNF716|441234|zinc finger protein 716##NM_001159279|ZNF716|441234|zinc finger protein 716##AF277624|ZNF479|90827|zinc finger protein 479##NM_033273|ZNF479|90827|zinc finger protein 479##BC043523|LOC389493|389493|uncharacterized protein LOC389493##NM_001145712|LOC389493|389493|uncharacterized protein LOC389493##NM_001159522|ZNF727|442319|zinc finger protein 727##NM_001159524|ZNF735|730291|zinc finger protein 735##BC033523|ZNF679|168417|zinc finger protein 679##NM_153363|ZNF679|168417|zinc finger protein 679	0.104605	
chr9	16482846	16482952	reg1033931.p1	3.519	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-929878	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-971939	-	AF098483 AF098482 NM_021144	-972652	-	TSC_hg19_v1_chr9_-_16727889 AY438376	244998	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	387768	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	387867	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.0	
chr1	111177518	111177642	reg1036575.p1	3.518	+	BC043564 NM_001204269	-3485	-	AK290061 NM_004974 TSC_hg19_v1_chr1_-_111148981	-28598	-	NM_005549	-115784	-	CU690040 DQ891663 DQ894850 M85217 BC064595 TSC_hg19_v1_chr1_-_111217406 L23499	39772	-	TSC_hg19_v1_chr1_-_111217553 AK314009	39964	-	TSC_hg19_v1_chr1_-_111217626 BC035059 NM_002232	40060	-	BC043564|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_001204269|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##AK290061|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_004974|KCNA2|3737|potassium voltage-gated channel, shaker-related subfamily, member 2##NM_005549|KCNA10|3744|potassium voltage-gated channel, shaker-related subfamily, member 10##DQ891663|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##DQ894850|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##M85217|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC064595|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##L23499|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##BC035059|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3##NM_002232|KCNA3|3738|potassium voltage-gated channel, shaker-related subfamily, member 3	0.0	
chr11	62446375	62446527	reg1028235.p1	3.518	+	TSC_hg19_v1_chr11_-_62439241 AK055736 BC001434 NM_024099	-7215	-	TSC_hg19_v1_chr11_+_62439144 BC090057	-7289	+	TSC_hg19_v1_chr11_+_62439122 AY358935 NM_001085372	-7329	+	CU674676 GQ129328 TSC_hg19_v1_chr11_-_62446540 M68864 BC001372 NM_015853 BC000902 BC032689 AK316012	16	-	AK054832 AK300542 AK303471 TSC_hg19_v1_chr11_-_62446546 BC040129 AK297856	109	-	AK291334 TSC_hg19_v1_chr11_-_62457003 AY358354 BC053902 AL834319	10649	-	AK055736|C11orf48|79081|chromosome 11 open reading frame 48##BC001434|C11orf48|79081|chromosome 11 open reading frame 48##NM_024099|C11orf48|79081|chromosome 11 open reading frame 48##BC090057|C11orf83|790955|chromosome 11 open reading frame 83##AY358935|C11orf83|790955|chromosome 11 open reading frame 83##NM_001085372|C11orf83|790955|chromosome 11 open reading frame 83##GQ129328|UBXN1|51035|UBX domain protein 1##M68864|UBXN1|51035|UBX domain protein 1##BC001372|UBXN1|51035|UBX domain protein 1##NM_015853|UBXN1|51035|UBX domain protein 1##BC000902|UBXN1|51035|UBX domain protein 1##BC032689|UBXN1|51035|UBX domain protein 1##AK316012|UBXN1|51035|UBX domain protein 1##AK054832|UBXN1|51035|UBX domain protein 1##AK300542|UBXN1|51035|UBX domain protein 1##AK303471|UBXN1|51035|UBX domain protein 1##BC040129|UBXN1|51035|UBX domain protein 1##AK297856|UBXN1|51035|UBX domain protein 1##AK291334|LRRN4CL|221091|LRRN4 C-terminal like##AY358354|LRRN4CL|221091|LRRN4 C-terminal like##BC053902|LRRN4CL|221091|LRRN4 C-terminal like##AL834319|LRRN4CL|221091|LRRN4 C-terminal like	0.0	
chr1	18325472	18325597	reg1043235.p1	3.518	+	AK057339 NM_030812 BC028909 U20582	-243688	+	AK092020 AX747316 AK300264 TSC_hg19_v1_chr1_+_17944871	-380669	+	TSC_hg19_v1_chr1_+_17906948 NM_001011722 BC117171 BC143347 DQ139833 HQ258640	-418519	+	TSC_hg19_v1_chr1_+_18434291 AK075316 NM_032880 BC007618	108743	+	NM_152375	481889	+	NM_001135254 NM_002584 NM_013945 X96743	631965	+	AK057339|ACTL8|81569|actin-like 8##NM_030812|ACTL8|81569|actin-like 8##BC028909|ACTL8|81569|actin-like 8##U20582|ACTL8|81569|actin-like 8##AK092020|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK300264|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##NM_001011722|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC117171|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##BC143347|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##DQ139833|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##HQ258640|ARHGEF10L|55160|Rho guanine nucleotide exchange factor (GEF) 10-like##AK075316|IGSF21|84966|immunoglobin superfamily, member 21##NM_032880|IGSF21|84966|immunoglobin superfamily, member 21##BC007618|IGSF21|84966|immunoglobin superfamily, member 21##NM_152375|KLHDC7A|127707|kelch domain containing 7A##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7	0.936461	CTCF.p2:20:0.936
chr1	185308526	185308646	reg1041058.p2	3.518	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-22116	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-22267	-	TSC_hg19_v1_chr1_+_185126418 AK291443	-182190	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	394990	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	956821	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	1035671	-	NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)	0.0	
chr12	76741928	76742015	reg1038611.p1	3.518	+	NM_004537 NM_139207	-263234	-	TSC_hg19_v1_chr12_-_76478466 BC002387 AL162068 AK122670 AK298936 D28430 AK297500 AK304787	-263483	-	TSC_hg19_v1_chr12_-_76478393 AK295147 M86667	-263593	-	TSC_hg19_v1_chr12_-_76742196 AK304178 BC026355 NM_024685	223	-	AB040884 TSC_hg19_v1_chr12_-_76953317 AK289997 CR749542	211320	-	BC111728 TSC_hg19_v1_chr12_-_76953484	211512	-	NM_004537|NAP1L1|4673|nucleosome assembly protein 1-like 1##NM_139207|NAP1L1|4673|nucleosome assembly protein 1-like 1##BC002387|NAP1L1|4673|nucleosome assembly protein 1-like 1##AL162068|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK122670|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK298936|NAP1L1|4673|nucleosome assembly protein 1-like 1##D28430|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK297500|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK304787|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK295147|NAP1L1|4673|nucleosome assembly protein 1-like 1##M86667|NAP1L1|4673|nucleosome assembly protein 1-like 1##AK304178|BBS10|79738|Bardet-Biedl syndrome 10##BC026355|BBS10|79738|Bardet-Biedl syndrome 10##NM_024685|BBS10|79738|Bardet-Biedl syndrome 10##AB040884|OSBPL8|114882|oxysterol binding protein-like 8##AK289997|OSBPL8|114882|oxysterol binding protein-like 8##CR749542|OSBPL8|114882|oxysterol binding protein-like 8##BC111728|OSBPL8|114882|oxysterol binding protein-like 8	0.545679	CTCF.p2:4:0.482
chr13	30946145	30946305	reg1027159.p2	3.518	+	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-64656	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	-65074	-	TSC_hg19_v1_chr13_-_30424811 NM_007106	-521384	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	93768	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	93833	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	245402	-	AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##NM_007106|UBL3|5412|ubiquitin-like 3##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1	0.0	
chr15	73345466	73345575	reg1037741.p1	3.518	+	NM_001172623 NM_001172624 NM_002499 U61262 U72391 BC117161 BC143270 BC143271 BC143279 AB528479	-600	+	TSC_hg19_v1_chr15_-_73076118 AK055526 NM_031284	-269397	-	BC044589 TSC_hg19_v1_chr15_-_73076072	-269449	-	TSC_hg19_v1_chr15_-_73661207 AJ132429 DQ854814	315687	-	AJ238850 NM_005477	316084	-	NM_001042367 AK131030 BC055412	389989	+	NM_001172623|NEO1|4756|neogenin 1##NM_001172624|NEO1|4756|neogenin 1##NM_002499|NEO1|4756|neogenin 1##U61262|NEO1|4756|neogenin 1##U72391|NEO1|4756|neogenin 1##BC117161|NEO1|4756|neogenin 1##BC143270|NEO1|4756|neogenin 1##BC143271|NEO1|4756|neogenin 1##BC143279|NEO1|4756|neogenin 1##AK055526|ADPGK|83440|ADP-dependent glucokinase##NM_031284|ADPGK|83440|ADP-dependent glucokinase##BC044589|ADPGK|83440|ADP-dependent glucokinase##AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_001042367|C15orf60|283677|chromosome 15 open reading frame 60##AK131030|C15orf60|283677|chromosome 15 open reading frame 60##BC055412|C15orf60|283677|chromosome 15 open reading frame 60	0.73994	CTCF.p2:-30:0.740
chr2	17981595	17981743	reg1033049.p1	3.518	+	TSC_hg19_v1_chr2_+_17935407 CR936783 NM_001130009 AK093631 AX748233	-46258	+	TSC_hg19_v1_chr2_+_17935163 BC038243 NM_182625 AK131387	-46500	+	BC039828 TSC_hg19_v1_chr2_-_17935086 NM_001142286 NM_024624	-46574	-	NM_001105569	16116	+	AK314451 TSC_hg19_v1_chr2_+_18059931 BC015947 NM_002252 BC004148 BC004987	78285	+	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	760247	-	CR936783|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##NM_001130009|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK093631|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##BC038243|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##NM_182625|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##AK131387|GEN1|348654|Gen endonuclease homolog 1 (Drosophila)##BC039828|SMC6|79677|structural maintenance of chromosomes 6##NM_001142286|SMC6|79677|structural maintenance of chromosomes 6##NM_024624|SMC6|79677|structural maintenance of chromosomes 6##NM_001105569|MSGN1|343930|mesogenin 1##AK314451|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC015947|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##NM_002252|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004148|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##BC004987|KCNS3|3790|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 3##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)	0.0	
chr3	11696802	11696926	reg1031409.p1	3.518	+	TSC_hg19_v1_chr3_-_11685397 NM_001128219	-11468	-	AK307708 TSC_hg19_v1_chr3_-_11623831 NM_001128220	-73031	-	TSC_hg19_v1_chr3_-_11610264 AK308761 NM_001128221	-86534	-	TSC_hg19_v1_chr3_-_11762012 D50911 BC001514 AK130542 BC000763 BC003038 NM_014667	65251	-	EU832515 EU832596 AK295839 TSC_hg19_v1_chr3_-_11888358 AK310993 BC015088 NM_138807 AK092776 AX747723 AK309733 AK303598	191395	-	TSC_hg19_v1_chr3_+_12045861 NM_003178 NM_133625 AK094464 BC051307 AB209088 U40215 AF077671 AF077737	349039	+	NM_001128219|VGLL4|9686|vestigial like 4 (Drosophila)##AK307708|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128220|VGLL4|9686|vestigial like 4 (Drosophila)##AK308761|VGLL4|9686|vestigial like 4 (Drosophila)##NM_001128221|VGLL4|9686|vestigial like 4 (Drosophila)##D50911|VGLL4|9686|vestigial like 4 (Drosophila)##BC001514|VGLL4|9686|vestigial like 4 (Drosophila)##AK130542|VGLL4|9686|vestigial like 4 (Drosophila)##BC000763|VGLL4|9686|vestigial like 4 (Drosophila)##BC003038|VGLL4|9686|vestigial like 4 (Drosophila)##NM_014667|VGLL4|9686|vestigial like 4 (Drosophila)##EU832515|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##EU832596|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK295839|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK310993|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##BC015088|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_138807|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK092776|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK309733|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##AK303598|TAMM41|132001|TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)##NM_003178|SYN2|6854|synapsin II##NM_133625|SYN2|6854|synapsin II##AK094464|SYN2|6854|synapsin II##BC051307|SYN2|6854|synapsin II##AB209088|SYN2|6854|synapsin II##U40215|SYN2|6854|synapsin II##AF077671|SYN2|6854|synapsin II##AF077737|SYN2|6854|synapsin II	0.0	
chr3	43801127	43801261	reg1035010.p2	3.518	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-68773	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-137681	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-137756	-	AK093476 AX748152 NM_001145030	482183	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	578436	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	578753	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.162461	
chr3	63897619	63897713	reg1039354.p2	3.518	+	NM_001177387	-13592	+	TSC_hg19_v1_chr3_+_63850212 AF032104 AF032105 NM_000333 AJ000517	-47458	+	TSC_hg19_v1_chr3_-_63849703 AK027098 AF104914 NM_025075	-48010	-	NM_001128149 AK310745 AK304062	55791	+	AF530062 AB463196 TSC_hg19_v1_chr3_-_64009149 BC000630 AK095059 AY568086 D14663 NM_014814 BC012369 BC000904 AK290205 BX647742 AF215935	111484	-	BC119002 AL833539 NM_198859	313454	-	NM_001177387|ATXN7|6314|ataxin 7##AF032104|ATXN7|6314|ataxin 7##AF032105|ATXN7|6314|ataxin 7##NM_000333|ATXN7|6314|ataxin 7##AJ000517|ATXN7|6314|ataxin 7##AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)##AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)##NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)##NM_001128149|ATXN7|6314|ataxin 7##AK310745|ATXN7|6314|ataxin 7##AK304062|ATXN7|6314|ataxin 7##AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)##NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)	0.0	
chr4	102269092	102269199	reg1042778.p1	3.518	+	BC098424 EU192652 NM_000944 NM_001130691 NM_001130692 TSC_hg19_v1_chr4_-_102268635 EU192653	-515	-	AK290532 TSC_hg19_v1_chr4_-_102268547	-630	-	TSC_hg19_v1_chr4_-_102268343 AL353950	-773	-	NM_001127507 NM_017935 TSC_hg19_v1_chr4_+_102711808	442651	+	TSC_hg19_v1_chr4_+_102711886 BC032241 AK292133 AL834291 EU051376 AB587395	442790	+	NM_001083907 TSC_hg19_v1_chr4_+_102734998 AK000713	465863	+	BC098424|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##EU192652|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_000944|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001130691|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001130692|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##EU192653|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AK290532|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AL353950|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001127507|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_017935|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##BC032241|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK292133|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AL834291|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##EU051376|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	0.852231	CTCF.p2:71:0.852
chr4	170696033	170696140	reg1041559.p1	3.518	+	AB528091 AM392880 TSC_hg19_v1_chr4_-_170679066 AK000541 AL136673 BC010367 NM_017867	-17014	-	AK127483 NM_001243374 TSC_hg19_v1_chr4_+_170581295	-114831	+	TSC_hg19_v1_chr4_+_170541735 BC070318 AK304362 BC054877 BC026256 BC136510	-154229	+	BC066912 AF327560 AK308263 NM_001009554	228836	-	AB014526 NM_021647 AK290041 TSC_hg19_v1_chr4_-_170947582	251419	-	AF481738 NM_016228 TSC_hg19_v1_chr4_-_171011213	315112	-	AM392880|C4orf27|54969|chromosome 4 open reading frame 27##AK000541|C4orf27|54969|chromosome 4 open reading frame 27##AL136673|C4orf27|54969|chromosome 4 open reading frame 27##BC010367|C4orf27|54969|chromosome 4 open reading frame 27##NM_017867|C4orf27|54969|chromosome 4 open reading frame 27##AK127483|CLCN3|1182|chloride channel 3##NM_001243374|CLCN3|1182|chloride channel 3##AK304362|CLCN3|1182|chloride channel 3##BC054877|CLCN3|1182|chloride channel 3##BC026256|CLCN3|1182|chloride channel 3##BC136510|CLCN3|1182|chloride channel 3##BC066912|MFAP3L|9848|microfibrillar-associated protein 3-like##AF327560|MFAP3L|9848|microfibrillar-associated protein 3-like##AK308263|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_001009554|MFAP3L|9848|microfibrillar-associated protein 3-like##AB014526|MFAP3L|9848|microfibrillar-associated protein 3-like##NM_021647|MFAP3L|9848|microfibrillar-associated protein 3-like##AK290041|MFAP3L|9848|microfibrillar-associated protein 3-like##AF481738|AADAT|51166|aminoadipate aminotransferase##NM_016228|AADAT|51166|aminoadipate aminotransferase	0.02843	
chr4	38807496	38807665	reg1032512.p2	3.518	+	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	-1161	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	-22981	-	AF289565 TSC_hg19_v1_chr4_-_38666549	-141091	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	50848	-	TSC_hg19_v1_chr4_+_38869390 NM_138389 AK304050 AK296859 AK292831 BC040452	61811	+	BC030803 BC060512 AK026888 NM_024943	226430	-	AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6##NM_138389|FAM114A1|92689|family with sequence similarity 114, member A1##AK304050|FAM114A1|92689|family with sequence similarity 114, member A1##AK296859|FAM114A1|92689|family with sequence similarity 114, member A1##AK292831|FAM114A1|92689|family with sequence similarity 114, member A1##BC040452|FAM114A1|92689|family with sequence similarity 114, member A1##BC030803|TMEM156|80008|transmembrane protein 156##BC060512|TMEM156|80008|transmembrane protein 156##AK026888|TMEM156|80008|transmembrane protein 156##NM_024943|TMEM156|80008|transmembrane protein 156	0.072716	
chr5	142784650	142784830	reg1010376.p4	3.518	+	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-574	-	TSC_hg19_v1_chr5_-_142784036 AK302050 NM_001018076	-708	-	TSC_hg19_v1_chr5_-_142783310 AJ888004	-1373	-	NM_001018074 NM_001018075 NM_001018077	30336	-	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	407018	+	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	765395	-	BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ888004|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5	0.0	
chr5	180214771	180214838	reg1045227.p1	3.518	+	NM_001001657 BC140756	-47727	-	TSC_hg19_v1_chr5_-_180076616 NM_002020 NM_182925	-138180	-	AK291679 AK309910 TSC_hg19_v1_chr5_-_180076601	-138202	-	M55621 TSC_hg19_v1_chr5_-_180229805 AK075429 AK090523	14960	-	NM_002406	15243	-	TSC_hg19_v1_chr5_-_180230897 NM_001114619 NM_001114620 AK290769	16108	-	NM_001001657|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1##BC140756|OR2Y1|134083|olfactory receptor, family 2, subfamily Y, member 1##NM_002020|FLT4|2324|fms-related tyrosine kinase 4##NM_182925|FLT4|2324|fms-related tyrosine kinase 4##AK291679|FLT4|2324|fms-related tyrosine kinase 4##AK309910|FLT4|2324|fms-related tyrosine kinase 4##M55621|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK075429|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK090523|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_002406|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_001114619|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##NM_001114620|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase##AK290769|MGAT1|4245|mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase	0.0	
chr8	50826415	50826557	reg1030940.p1	3.518	+	AJ003030 NM_018967	-1890	+	NM_001007176 BC017981 AJ276240	-841577	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-992576	-	EU170240 AY877349 NM_144651	1895467	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	1985116	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	1985241	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.0	
chr8	99902787	99902881	reg1036064.p1	3.518	+	CU679773 AB528979 U60206 AK291837 TSC_hg19_v1_chr8_-_99837906 AK075229 BC010640 AK307787 AK312660 NM_006281 U26424	-64987	-	BC034778 NM_020697 BC027932 TSC_hg19_v1_chr8_+_99439361 AB032970	-463488	+	BC132687 BC144055 TSC_hg19_v1_chr8_-_99306600 AK024017 NM_024759	-596235	-	NM_001142462 NM_053001 TSC_hg19_v1_chr8_+_99956669 AK074518 AK291491 AK310994 BC016936 AY038073	53823	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	122661	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	122678	+	U60206|STK3|6788|serine/threonine kinase 3##AK291837|STK3|6788|serine/threonine kinase 3##AK075229|STK3|6788|serine/threonine kinase 3##BC010640|STK3|6788|serine/threonine kinase 3##AK307787|STK3|6788|serine/threonine kinase 3##AK312660|STK3|6788|serine/threonine kinase 3##NM_006281|STK3|6788|serine/threonine kinase 3##U26424|STK3|6788|serine/threonine kinase 3##BC034778|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##NM_020697|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC027932|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##AB032970|KCNS2|3788|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 2##BC132687|NIPAL2|79815|NIPA-like domain containing 2##BC144055|NIPAL2|79815|NIPA-like domain containing 2##AK024017|NIPAL2|79815|NIPA-like domain containing 2##NM_024759|NIPAL2|79815|NIPA-like domain containing 2##NM_001142462|OSR2|116039|odd-skipped related 2 (Drosophila)##NM_053001|OSR2|116039|odd-skipped related 2 (Drosophila)##AK074518|OSR2|116039|odd-skipped related 2 (Drosophila)##AK291491|OSR2|116039|odd-skipped related 2 (Drosophila)##AK310994|OSR2|116039|odd-skipped related 2 (Drosophila)##BC016936|OSR2|116039|odd-skipped related 2 (Drosophila)##AY038073|OSR2|116039|odd-skipped related 2 (Drosophila)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)	0.592276	CTCF.p2:1:0.592
chr9	33179431	33179540	reg1039611.p1	3.518	+	NM_001497 TSC_hg19_v1_chr9_-_33167361	-12124	-	TSC_hg19_v1_chr9_-_33167335 BC045773	-12159	-	D29805 X13223 X14085 M22921 U10474 TSC_hg19_v1_chr9_-_33167262	-12238	-	TSC_hg19_v1_chr9_+_33240166 AF048700 BC110068 NM_014471	60695	+	AM392568 BC014774 TSC_hg19_v1_chr9_-_33264707 AK096038 AK316577 AF116273 BC002407 AK222749 AF022224 U46917 BC001936 Z35491 NM_001172415 NM_004323	85123	-	NM_001195536 NM_016410 TSC_hg19_v1_chr9_+_33265035 BC016698 BC007457 AK315455 AK024753 BC018603 BC021168 AK295744	85471	+	NM_001497|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##BC045773|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##D29805|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X13223|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##X14085|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##M22921|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##U10474|B4GALT1|2683|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1##AF048700|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##BC110068|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##NM_014471|SPINK4|27290|serine peptidase inhibitor, Kazal type 4##AM392568|BAG1|573|BCL2-associated athanogene##BC014774|BAG1|573|BCL2-associated athanogene##AK096038|BAG1|573|BCL2-associated athanogene##AK316577|BAG1|573|BCL2-associated athanogene##AF116273|BAG1|573|BCL2-associated athanogene##AK222749|BAG1|573|BCL2-associated athanogene##AF022224|BAG1|573|BCL2-associated athanogene##U46917|BAG1|573|BCL2-associated athanogene##BC001936|BAG1|573|BCL2-associated athanogene##Z35491|BAG1|573|BCL2-associated athanogene##NM_001172415|BAG1|573|BCL2-associated athanogene##NM_004323|BAG1|573|BCL2-associated athanogene##NM_001195536|CHMP5|51510|charged multivesicular body protein 5##NM_016410|CHMP5|51510|charged multivesicular body protein 5##BC016698|CHMP5|51510|charged multivesicular body protein 5##BC007457|CHMP5|51510|charged multivesicular body protein 5##AK315455|CHMP5|51510|charged multivesicular body protein 5##AK024753|CHMP5|51510|charged multivesicular body protein 5##BC018603|CHMP5|51510|charged multivesicular body protein 5##BC021168|CHMP5|51510|charged multivesicular body protein 5##AK295744|CHMP5|51510|charged multivesicular body protein 5	0.220201	CTCF.p2:29:0.220
chr9	34984393	34984492	reg1031316.p2	3.518	+	AB028968 TSC_hg19_v1_chr9_+_34958324	-26119	+	TSC_hg19_v1_chr9_+_34958175 BC041169 NM_015297	-26261	+	AK301951 AK302320 NM_001141917	-254944	-	NM_001135004 NM_012266 TSC_hg19_v1_chr9_+_34989739 AK023253 BC012115 AK314671 AF087870	5275	+	AK299647 NM_001135005 TSC_hg19_v1_chr9_+_34990289	5836	+	AF088982 TSC_hg19_v1_chr9_+_34990719	6276	+	AB028968|KIAA1045|23349|KIAA1045##BC041169|KIAA1045|23349|KIAA1045##NM_015297|KIAA1045|23349|KIAA1045##AK302320|FAM205A|259308|family with sequence similarity 205, member A##NM_001141917|FAM205A|259308|family with sequence similarity 205, member A##NM_001135004|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##NM_012266|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK023253|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK314671|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AF087870|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AK299647|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##NM_001135005|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5##AF088982|DNAJB5|25822|DnaJ (Hsp40) homolog, subfamily B, member 5	0.0	
chr10	125979125	125979204	reg1038385.p2	3.517	+	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	-126011	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	-127265	-	BC137492 BC146862 AY358565 NM_198148	-327668	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	128309	-	TSC_hg19_v1_chr10_-_126107493 CR749808 NM_000274 NM_001171814	128354	-	NM_001146340 TSC_hg19_v1_chr10_-_126138606	159413	-	BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase##CR749808|OAT|4942|ornithine aminotransferase##NM_000274|OAT|4942|ornithine aminotransferase##NM_001171814|OAT|4942|ornithine aminotransferase##NM_001146340|NKX1-2|390010|NK1 homeobox 2	0.0	
chr10	75534642	75534763	reg1042526.p2	3.517	+	TSC_hg19_v1_chr10_+_75532277 AK095482	-2416	+	TSC_hg19_v1_chr10_+_75532065 AK314944 DQ894378 EU176260	-2625	+	TSC_hg19_v1_chr10_+_75532064 BC036037 NM_173540 BC100994 BC100995 BC100996 BC100997	-2649	+	AK098720 TSC_hg19_v1_chr10_+_75541817 NM_203298 BC020852 BC015387 EU832829 GQ129436	7119	+	TSC_hg19_v1_chr10_+_75545339 AK091621 AX747098	10618	+	TSC_hg19_v1_chr10_+_75545371 AB020720 NM_001242487 NM_001242488 NM_015037 BC137249 BC137250	10687	+	AK095482|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)##AK314944|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)##DQ894378|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)##EU176260|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)##BC036037|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)##NM_173540|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)##BC100994|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)##BC100995|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)##BC100996|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)##BC100997|FUT11|170384|fucosyltransferase 11 (alpha (1,3) fucosyltransferase)##AK098720|CHCHD1|118487|coiled-coil-helix-coiled-coil-helix domain containing 1##NM_203298|CHCHD1|118487|coiled-coil-helix-coiled-coil-helix domain containing 1##BC020852|CHCHD1|118487|coiled-coil-helix-coiled-coil-helix domain containing 1##BC015387|CHCHD1|118487|coiled-coil-helix-coiled-coil-helix domain containing 1##EU832829|CHCHD1|118487|coiled-coil-helix-coiled-coil-helix domain containing 1##GQ129436|CHCHD1|118487|coiled-coil-helix-coiled-coil-helix domain containing 1##AK091621|KIAA0913|23053|KIAA0913##AB020720|KIAA0913|23053|KIAA0913##NM_001242487|KIAA0913|23053|KIAA0913##NM_001242488|KIAA0913|23053|KIAA0913##NM_015037|KIAA0913|23053|KIAA0913##BC137249|KIAA0913|23053|KIAA0913##BC137250|KIAA0913|23053|KIAA0913	0.88665	CTCF.p2:-13:0.887
chr12	120559837	120560018	reg1039576.p2	3.517	+	TSC_hg19_v1_chr12_+_120554697 BC041995 AK130486	-5218	+	TSC_hg19_v1_chr12_-_120554632 NM_001167606 NM_006861	-5288	-	TSC_hg19_v1_chr12_-_120554558 AK300127	-5362	-	TSC_hg19_v1_chr12_-_120632504 AB587307 AK297271 BC153881 D86973 NM_006836	72561	-	BC019014 BC000087 TSC_hg19_v1_chr12_-_120638906 BC070194	78974	-	AK129754 AK222571 AK304674 BC107717 D28418 TSC_hg19_v1_chr12_-_120638911 AK222468 AK291109	78983	-	NM_001167606|RAB35|11021|RAB35, member RAS oncogene family##NM_006861|RAB35|11021|RAB35, member RAS oncogene family##AK300127|RAB35|11021|RAB35, member RAS oncogene family##AK297271|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##BC153881|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##D86973|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##NM_006836|GCN1L1|10985|GCN1 general control of amino-acid synthesis 1-like 1 (yeast)##BC019014|RPLP0|6175|ribosomal protein, large, P0##BC000087|RPLP0|6175|ribosomal protein, large, P0##BC070194|RPLP0|6175|ribosomal protein, large, P0##AK129754|RPLP0|6175|ribosomal protein, large, P0##AK222571|RPLP0|6175|ribosomal protein, large, P0##AK304674|RPLP0|6175|ribosomal protein, large, P0##BC107717|RPLP0|6175|ribosomal protein, large, P0##D28418|RPLP0|6175|ribosomal protein, large, P0##AK222468|RPLP0|6175|ribosomal protein, large, P0##AK291109|RPLP0|6175|ribosomal protein, large, P0	0.0	
chr1	216480340	216480429	reg1041585.p2	3.517	+	TSC_hg19_v1_chr1_+_215740717 BC013868 NM_016121 BC094879 BC117188 BC126173 BC143963 HQ258497	-739521	+	NM_001017425 NM_014217 AK294780 AK291483 BC143586 BC101693 BC101695 AF004711 EF165334 AF171068 BC069462 EF165335	-1223774	+	NM_001017424	-1301500	+	AF055580 AY481573 NM_007123 NM_206933	116353	-	HQ692853 AF117255 BC008218 AY388456 AK291647 TSC_hg19_v1_chr1_-_216896791 AB020639 AK290945 BC064700 NM_001243515 NM_001243518 NM_001243519 NM_001438	416342	-	AY388461 NM_001243514	498324	-	BC013868|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_016121|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC094879|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC117188|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC126173|KCTD3|51133|potassium channel tetramerisation domain containing 3##BC143963|KCTD3|51133|potassium channel tetramerisation domain containing 3##HQ258497|KCTD3|51133|potassium channel tetramerisation domain containing 3##NM_001017425|KCNK2|3776|potassium channel, subfamily K, member 2##NM_014217|KCNK2|3776|potassium channel, subfamily K, member 2##AK294780|KCNK2|3776|potassium channel, subfamily K, member 2##AK291483|KCNK2|3776|potassium channel, subfamily K, member 2##BC143586|KCNK2|3776|potassium channel, subfamily K, member 2##BC101693|KCNK2|3776|potassium channel, subfamily K, member 2##BC101695|KCNK2|3776|potassium channel, subfamily K, member 2##AF004711|KCNK2|3776|potassium channel, subfamily K, member 2##EF165334|KCNK2|3776|potassium channel, subfamily K, member 2##AF171068|KCNK2|3776|potassium channel, subfamily K, member 2##BC069462|KCNK2|3776|potassium channel, subfamily K, member 2##EF165335|KCNK2|3776|potassium channel, subfamily K, member 2##NM_001017424|KCNK2|3776|potassium channel, subfamily K, member 2##AF055580|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##AY481573|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_007123|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##NM_206933|USH2A|7399|Usher syndrome 2A (autosomal recessive, mild)##HQ692853|ESRRG|2104|estrogen-related receptor gamma##AF117255|ESRRG|2104|estrogen-related receptor gamma##BC008218|ESRRG|2104|estrogen-related receptor gamma##AY388456|ESRRG|2104|estrogen-related receptor gamma##AK291647|ESRRG|2104|estrogen-related receptor gamma##AB020639|ESRRG|2104|estrogen-related receptor gamma##AK290945|ESRRG|2104|estrogen-related receptor gamma##BC064700|ESRRG|2104|estrogen-related receptor gamma##NM_001243515|ESRRG|2104|estrogen-related receptor gamma##NM_001243518|ESRRG|2104|estrogen-related receptor gamma##NM_001243519|ESRRG|2104|estrogen-related receptor gamma##NM_001438|ESRRG|2104|estrogen-related receptor gamma##AY388461|ESRRG|2104|estrogen-related receptor gamma##NM_001243514|ESRRG|2104|estrogen-related receptor gamma	0.233843	CTCF.p2:-20:0.234
chr13	32540018	32540155	reg1037317.p2	3.517	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-119184	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-226373	+	AK291273 TSC_hg19_v1_chr13_+_31774136 BC068595 AB101481 AY190526	-765876	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	65355	+	BC146956 BC146965 NM_001136571	346003	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	349531	+	BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AK291273|B3GALTL|145173|beta 1,3-galactosyltransferase-like##BC068595|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AB101481|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AY190526|B3GALTL|145173|beta 1,3-galactosyltransferase-like##AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset	0.0	
chr14	93147737	93147875	reg1005716.p2	3.517	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	-28983	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	-29170	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	-167847	+	Y09862 BC003061 AK225822 TSC_hg19_v1_chr14_-_93214973 BX161422 BX161380 BX161434 AK291534 AK291560 AK297074 AK297780 NM_001008530 NM_005606	67153	-	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	112880	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	241638	+	AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##Y09862|LGMN|5641|legumain##BC003061|LGMN|5641|legumain##AK225822|LGMN|5641|legumain##BX161422|LGMN|5641|legumain##BX161380|LGMN|5641|legumain##BX161434|LGMN|5641|legumain##AK291534|LGMN|5641|legumain##AK291560|LGMN|5641|legumain##AK297074|LGMN|5641|legumain##AK297780|LGMN|5641|legumain##NM_001008530|LGMN|5641|legumain##NM_005606|LGMN|5641|legumain##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)	0.0	
chr17	63653107	63653205	reg1046775.p2	3.517	+	CR933657 TSC_hg19_v1_chr17_-_63557767	-95388	-	TSC_hg19_v1_chr17_-_63557659 AK315303 NM_004655	-95477	-	BC006295 TSC_hg19_v1_chr17_-_63556453	-96681	-	BC029524 NM_001037325	169504	-	BC131805 TSC_hg19_v1_chr17_-_64188195 BC037991 NM_145036 AK299075 AK096929 NM_001199165	535025	-	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	572369	-	CR933657|AXIN2|8313|axin 2##AK315303|AXIN2|8313|axin 2##NM_004655|AXIN2|8313|axin 2##BC006295|AXIN2|8313|axin 2##BC029524|CEP112|201134|centrosomal protein 112kDa##NM_001037325|CEP112|201134|centrosomal protein 112kDa##BC131805|CEP112|201134|centrosomal protein 112kDa##BC037991|CEP112|201134|centrosomal protein 112kDa##NM_145036|CEP112|201134|centrosomal protein 112kDa##AK299075|CEP112|201134|centrosomal protein 112kDa##AK096929|CEP112|201134|centrosomal protein 112kDa##NM_001199165|CEP112|201134|centrosomal protein 112kDa##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)	0.0	
chr18	46689000	46689110	reg1039862.p1	3.517	+	AF010193 NM_001190821 NM_005904	-211975	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	-212288	-	AK301535 NM_001190822	-213353	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	297996	-	TSC_hg19_v1_chr18_-_47013575 AB097012	324510	-	TSC_hg19_v1_chr18_-_47013599 BC093004	324544	-	AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin##AB097012|C18orf32|497661|chromosome 18 open reading frame 32##BC093004|C18orf32|497661|chromosome 18 open reading frame 32	0.17579	
chr20	55967863	55967987	reg1028057.p1	3.517	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-1468	+	NM_001190472	-33048	-	AK292247 AY349350 NM_001015885	-41324	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	132276	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	168232	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	227613	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.048567	
chr22	27038992	27039104	reg1033957.p2	3.517	+	BC069404 CR456424 NM_001886 U59057 AB528112 CU012985 CU013273 BC096171 BC096172 BC096173 BC096174	-21117	+	BC036790 TSC_hg19_v1_chr22_-_27014064	-24986	-	CR456425 NM_001887 U35340 TSC_hg19_v1_chr22_-_27013992	-25065	-	TSC_hg19_v1_chr22_+_27053392 AB263414 AB263415 AB263416 AB263417 AK098833	14424	+	TSC_hg19_v1_chr22_+_27068725 AK026502	29692	+	TSC_hg19_v1_chr22_-_28197481 NM_002430 X82209	1158429	-	BC069404|CRYBA4|1413|crystallin, beta A4##CR456424|CRYBA4|1413|crystallin, beta A4##NM_001886|CRYBA4|1413|crystallin, beta A4##U59057|CRYBA4|1413|crystallin, beta A4##CU012985|CRYBA4|1413|crystallin, beta A4##CU013273|CRYBA4|1413|crystallin, beta A4##BC096171|CRYBA4|1413|crystallin, beta A4##BC096172|CRYBA4|1413|crystallin, beta A4##BC096173|CRYBA4|1413|crystallin, beta A4##BC096174|CRYBA4|1413|crystallin, beta A4##BC036790|CRYBB1|1414|crystallin, beta B1##CR456425|CRYBB1|1414|crystallin, beta B1##NM_001887|CRYBB1|1414|crystallin, beta B1##U35340|CRYBB1|1414|crystallin, beta B1##AB263414|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263415|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263416|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AB263417|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AK098833|MIAT|440823|myocardial infarction associated transcript (non-protein coding)##AK026502|LOC100507637|100507637|uncharacterized LOC100507637##NM_002430|MN1|4330|meningioma (disrupted in balanced translocation) 1##X82209|MN1|4330|meningioma (disrupted in balanced translocation) 1	0.889163	CTCF.p2:-46:0.889
chr4	17597384	17597496	reg1042981.p1	3.517	+	TSC_hg19_v1_chr4_+_17579121 AK298613 AK307723 AK225511 BC006199 AK298790	-18310	+	TSC_hg19_v1_chr4_+_17579057 BC065564 CR457128 AK022055	-18364	+	TSC_hg19_v1_chr4_+_17578852 NM_015907	-18558	+	TSC_hg19_v1_chr4_+_17616263 AF318059 AK313928 AF358829 NM_025205 BC011936 AF317680 DQ893391 DQ896713 AF317679 AF317678	18826	+	AK308144 NM_015688	185694	-	BC050697 TSC_hg19_v1_chr4_-_17806917	209428	-	AK298613|LAP3|51056|leucine aminopeptidase 3##AK307723|LAP3|51056|leucine aminopeptidase 3##AK225511|LAP3|51056|leucine aminopeptidase 3##BC006199|LAP3|51056|leucine aminopeptidase 3##AK298790|LAP3|51056|leucine aminopeptidase 3##BC065564|LAP3|51056|leucine aminopeptidase 3##CR457128|LAP3|51056|leucine aminopeptidase 3##AK022055|LAP3|51056|leucine aminopeptidase 3##NM_015907|LAP3|51056|leucine aminopeptidase 3##AF318059|MED28|80306|mediator complex subunit 28##AK313928|MED28|80306|mediator complex subunit 28##AF358829|MED28|80306|mediator complex subunit 28##NM_025205|MED28|80306|mediator complex subunit 28##BC011936|MED28|80306|mediator complex subunit 28##AF317680|MED28|80306|mediator complex subunit 28##DQ893391|MED28|80306|mediator complex subunit 28##DQ896713|MED28|80306|mediator complex subunit 28##AF317679|MED28|80306|mediator complex subunit 28##AF317678|MED28|80306|mediator complex subunit 28##AK308144|FAM184B|27146|family with sequence similarity 184, member B##NM_015688|FAM184B|27146|family with sequence similarity 184, member B##BC050697|DCAF16|54876|DDB1 and CUL4 associated factor 16	0.0	
chr7	65537347	65537458	reg1042449.p1	3.517	+	TSC_hg19_v1_chr7_-_65447233 NM_000181	-90136	-	TSC_hg19_v1_chr7_-_65447209 AK312752	-90184	-	TSC_hg19_v1_chr7_-_65447200 M15182 AK303819 AK223406 AK300223 AK311273	-90207	-	TSC_hg19_v1_chr7_+_65540820 NM_000048 BC008195 J03058 AK300519	3389	+	TSC_hg19_v1_chr7_+_65540823 AK310912 NM_001024943 NM_001024944 NM_001024946	3472	+	AK316334 TSC_hg19_v1_chr7_+_65540940 M14218 M57638 Y00753 BC033146	3578	+	NM_000181|GUSB|2990|glucuronidase, beta##AK312752|GUSB|2990|glucuronidase, beta##M15182|GUSB|2990|glucuronidase, beta##AK303819|GUSB|2990|glucuronidase, beta##AK223406|GUSB|2990|glucuronidase, beta##AK300223|GUSB|2990|glucuronidase, beta##AK311273|GUSB|2990|glucuronidase, beta##NM_000048|ASL|435|argininosuccinate lyase##BC008195|ASL|435|argininosuccinate lyase##J03058|ASL|435|argininosuccinate lyase##AK300519|ASL|435|argininosuccinate lyase##AK310912|ASL|435|argininosuccinate lyase##NM_001024943|ASL|435|argininosuccinate lyase##NM_001024944|ASL|435|argininosuccinate lyase##NM_001024946|ASL|435|argininosuccinate lyase##AK316334|ASL|435|argininosuccinate lyase##M14218|ASL|435|argininosuccinate lyase##M57638|ASL|435|argininosuccinate lyase##Y00753|ASL|435|argininosuccinate lyase##BC033146|ASL|435|argininosuccinate lyase	0.830271	CTCF.p2:-1:0.830
chrX	148620677	148620857	reg1031575.p1	3.517	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	-33993	-	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-820155	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-1038579	+	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	1663	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	1827	+	AK300334 NM_001171909	5298	+	AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A##AK300334|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171909|CXorf40A|91966|chromosome X open reading frame 40A	0.0	
chr10	6114600	6114780	reg1043393.p2	3.516	+	AB528862 AK223313 K03122 X01057 AK313847 NM_000417	-10468	-	AF035279 BC107777 BC065506 NM_001243539	-94676	-	CR542023 HQ401283 AB590464 BC121140 AK304211 BC074726 BC121141 U31628 NM_002189 NM_172200	-95177	-	TSC_hg19_v1_chr10_+_6130954 NM_032905	16259	+	TSC_hg19_v1_chr10_+_6131024 AF542550 AK314952	16309	+	TSC_hg19_v1_chr10_+_6131035 BC007871 BC039322 NM_001145547	16481	+	AK223313|IL2RA|3559|interleukin 2 receptor, alpha##K03122|IL2RA|3559|interleukin 2 receptor, alpha##X01057|IL2RA|3559|interleukin 2 receptor, alpha##AK313847|IL2RA|3559|interleukin 2 receptor, alpha##NM_000417|IL2RA|3559|interleukin 2 receptor, alpha##AF035279|IL15RA|3601|interleukin 15 receptor, alpha##BC107777|IL15RA|3601|interleukin 15 receptor, alpha##BC065506|IL15RA|3601|interleukin 15 receptor, alpha##NM_001243539|IL15RA|3601|interleukin 15 receptor, alpha##CR542023|IL15RA|3601|interleukin 15 receptor, alpha##HQ401283|IL15RA|3601|interleukin 15 receptor, alpha##BC121140|IL15RA|3601|interleukin 15 receptor, alpha##AK304211|IL15RA|3601|interleukin 15 receptor, alpha##BC074726|IL15RA|3601|interleukin 15 receptor, alpha##BC121141|IL15RA|3601|interleukin 15 receptor, alpha##U31628|IL15RA|3601|interleukin 15 receptor, alpha##NM_002189|IL15RA|3601|interleukin 15 receptor, alpha##NM_172200|IL15RA|3601|interleukin 15 receptor, alpha##NM_032905|RBM17|84991|RNA binding motif protein 17##AF542550|RBM17|84991|RNA binding motif protein 17##AK314952|RBM17|84991|RNA binding motif protein 17##BC007871|RBM17|84991|RNA binding motif protein 17##BC039322|RBM17|84991|RNA binding motif protein 17##NM_001145547|RBM17|84991|RNA binding motif protein 17	0.0	
chr1	170183624	170183785	reg1037542.p2	3.516	+	BC157860 BC171858 NM_001136107	-68517	+	CU688542 DQ890952 DQ894114 AK026471 TSC_hg19_v1_chr1_-_170043807 AK315586 U59919 AK297368 AK303052 BC028679 NM_001204514 NM_001204516 NM_014970	-139961	-	AK122897 NM_001204517	-145649	-	TSC_hg19_v1_chr1_+_170501309 AK308339 NM_001146039 NM_152281 AK021814 BC064945 CU687974 BC047476 AK057661	317599	+	TSC_hg19_v1_chr1_+_170632302 AK225968	448586	+	BC074993 NM_006902 NM_022716 EU446648 AB527492 AB451463 TSC_hg19_v1_chr1_+_170633380 M95929	449658	+	BC157860|METTL11B|149281|methyltransferase like 11B##BC171858|METTL11B|149281|methyltransferase like 11B##NM_001136107|METTL11B|149281|methyltransferase like 11B##DQ890952|KIFAP3|22920|kinesin-associated protein 3##DQ894114|KIFAP3|22920|kinesin-associated protein 3##AK026471|KIFAP3|22920|kinesin-associated protein 3##AK315586|KIFAP3|22920|kinesin-associated protein 3##U59919|KIFAP3|22920|kinesin-associated protein 3##AK297368|KIFAP3|22920|kinesin-associated protein 3##AK303052|KIFAP3|22920|kinesin-associated protein 3##BC028679|KIFAP3|22920|kinesin-associated protein 3##NM_001204514|KIFAP3|22920|kinesin-associated protein 3##NM_001204516|KIFAP3|22920|kinesin-associated protein 3##NM_014970|KIFAP3|22920|kinesin-associated protein 3##AK122897|KIFAP3|22920|kinesin-associated protein 3##NM_001204517|KIFAP3|22920|kinesin-associated protein 3##AK308339|GORAB|92344|golgin, RAB6-interacting##NM_001146039|GORAB|92344|golgin, RAB6-interacting##NM_152281|GORAB|92344|golgin, RAB6-interacting##AK021814|GORAB|92344|golgin, RAB6-interacting##BC064945|GORAB|92344|golgin, RAB6-interacting##BC047476|GORAB|92344|golgin, RAB6-interacting##AK057661|GORAB|92344|golgin, RAB6-interacting##AK225968|PRRX1|5396|paired related homeobox 1##BC074993|PRRX1|5396|paired related homeobox 1##NM_006902|PRRX1|5396|paired related homeobox 1##NM_022716|PRRX1|5396|paired related homeobox 1##EU446648|PRRX1|5396|paired related homeobox 1##AB451463|PRRX1|5396|paired related homeobox 1	0.0	
chr12	109083807	109083901	reg1043549.p1	3.516	+	TSC_hg19_v1_chr12_-_109027671 AK127638 AK298738 AK098315 NM_003006	-56192	-	TSC_hg19_v1_chr12_-_109027639 AK300057 AK290395 BC029782	-56221	-	AK225644 U02297 AK295238 TSC_hg19_v1_chr12_-_109027584	-56280	-	TSC_hg19_v1_chr12_-_109125268 AL162070 AK297463	41409	-	TSC_hg19_v1_chr12_-_109125284 BC002342 AB209909	41426	-	TSC_hg19_v1_chr12_-_109125295 AK023205 AK223073 AK304839 AK311315 AK316065 AB030656 NM_014325	41438	-	AK127638|SELPLG|6404|selectin P ligand##AK098315|SELPLG|6404|selectin P ligand##NM_003006|SELPLG|6404|selectin P ligand##AK290395|SELPLG|6404|selectin P ligand##BC029782|SELPLG|6404|selectin P ligand##AK225644|SELPLG|6404|selectin P ligand##U02297|SELPLG|6404|selectin P ligand##AK295238|SELPLG|6404|selectin P ligand##AL162070|CORO1C|23603|coronin, actin binding protein, 1C##AK297463|CORO1C|23603|coronin, actin binding protein, 1C##BC002342|CORO1C|23603|coronin, actin binding protein, 1C##AB209909|CORO1C|23603|coronin, actin binding protein, 1C##AK023205|CORO1C|23603|coronin, actin binding protein, 1C##AK223073|CORO1C|23603|coronin, actin binding protein, 1C##AK304839|CORO1C|23603|coronin, actin binding protein, 1C##AK311315|CORO1C|23603|coronin, actin binding protein, 1C##AK316065|CORO1C|23603|coronin, actin binding protein, 1C##AB030656|CORO1C|23603|coronin, actin binding protein, 1C##NM_014325|CORO1C|23603|coronin, actin binding protein, 1C	0.0	
chr14	105527138	105527263	reg1035233.p1	3.516	+	TSC_hg19_v1_chr14_-_105487428 NM_017955 NM_145701	-39776	-	TSC_hg19_v1_chr14_-_105487413 AK303947	-39784	-	TSC_hg19_v1_chr14_-_105487410 AF322239 BC011736 BC025263	-39813	-	TSC_hg19_v1_chr14_-_105531756 AF083955 AX775937 NM_013345 EU543705	4548	-	TSC_hg19_v1_chr14_-_105531768 AB465599 AB465600 AK292142 AK303654 AX775935 AX775841	4573	-	Y14330 AF003521 AF020201 TSC_hg19_v1_chr14_-_105634835 BC032053	107591	-	NM_017955|CDCA4|55038|cell division cycle associated 4##NM_145701|CDCA4|55038|cell division cycle associated 4##AK303947|CDCA4|55038|cell division cycle associated 4##AF322239|CDCA4|55038|cell division cycle associated 4##BC011736|CDCA4|55038|cell division cycle associated 4##BC025263|CDCA4|55038|cell division cycle associated 4##AF083955|GPR132|29933|G protein-coupled receptor 132##NM_013345|GPR132|29933|G protein-coupled receptor 132##EU543705|GPR132|29933|G protein-coupled receptor 132##AB465599|GPR132|29933|G protein-coupled receptor 132##AB465600|GPR132|29933|G protein-coupled receptor 132##AK292142|GPR132|29933|G protein-coupled receptor 132##AK303654|GPR132|29933|G protein-coupled receptor 132##AX775935|GPR132|29933|G protein-coupled receptor 132##AX775841|GPR132|29933|G protein-coupled receptor 132##Y14330|JAG2|3714|jagged 2##AF003521|JAG2|3714|jagged 2##AF020201|JAG2|3714|jagged 2##BC032053|JAG2|3714|jagged 2	0.0	
chr14	96645412	96645519	reg1044680.p1	3.516	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	-139819	+	AK023027 TSC_hg19_v1_chr14_+_96342762	-302720	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-464998	-	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	25612	+	TSC_hg19_v1_chr14_+_96671180 AK299316 AK311049 M88714	25731	+	AK291970 AK309528 NM_000710 TSC_hg19_v1_chr14_+_96722546 U30271 AJ238044	77089	+	NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##AK023027|LOC100507043|100507043|uncharacterized LOC100507043##CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2##AK299316|BDKRB2|624|bradykinin receptor B2##AK311049|BDKRB2|624|bradykinin receptor B2##M88714|BDKRB2|624|bradykinin receptor B2##AK291970|BDKRB1|623|bradykinin receptor B1##AK309528|BDKRB1|623|bradykinin receptor B1##NM_000710|BDKRB1|623|bradykinin receptor B1##U30271|BDKRB1|623|bradykinin receptor B1##AJ238044|BDKRB1|623|bradykinin receptor B1	0.198252	
chr17	27052595	27052668	reg1036421.p2	3.516	+	TSC_hg19_v1_chr17_+_27047009 NM_000984 U43701 AK130965 AK312123 BC058041 U37230 BC014459 U02032	-5623	+	AF327350 AK297850 AK027312 AJ277106 AK304633 BC066904 NM_001142624 NM_001142625 NM_001144943	-7403	-	TSC_hg19_v1_chr17_-_27044728 BC016841 AK074689 NM_001144942 NM_031934	-7814	-	EU831756 EU831834 TSC_hg19_v1_chr17_-_27053250 BC014072 NM_138463	557	-	NM_001160407	1317	-	BC112240 BC113705 AK301429 AY242354 AY267371 HQ258347 NM_178170	3183	+	NM_000984|RPL23A|6147|ribosomal protein L23a##U43701|RPL23A|6147|ribosomal protein L23a##AK130965|RPL23A|6147|ribosomal protein L23a##AK312123|RPL23A|6147|ribosomal protein L23a##BC058041|RPL23A|6147|ribosomal protein L23a##U37230|RPL23A|6147|ribosomal protein L23a##BC014459|RPL23A|6147|ribosomal protein L23a##U02032|RPL23A|6147|ribosomal protein L23a##AF327350|RAB34|83871|RAB34, member RAS oncogene family##AK297850|RAB34|83871|RAB34, member RAS oncogene family##AK027312|RAB34|83871|RAB34, member RAS oncogene family##AJ277106|RAB34|83871|RAB34, member RAS oncogene family##AK304633|RAB34|83871|RAB34, member RAS oncogene family##BC066904|RAB34|83871|RAB34, member RAS oncogene family##NM_001142624|RAB34|83871|RAB34, member RAS oncogene family##NM_001142625|RAB34|83871|RAB34, member RAS oncogene family##NM_001144943|RAB34|83871|RAB34, member RAS oncogene family##BC016841|RAB34|83871|RAB34, member RAS oncogene family##AK074689|RAB34|83871|RAB34, member RAS oncogene family##NM_001144942|RAB34|83871|RAB34, member RAS oncogene family##NM_031934|RAB34|83871|RAB34, member RAS oncogene family##EU831756|TLCD1|116238|TLC domain containing 1##EU831834|TLCD1|116238|TLC domain containing 1##BC014072|TLCD1|116238|TLC domain containing 1##NM_138463|TLCD1|116238|TLC domain containing 1##NM_001160407|TLCD1|116238|TLC domain containing 1##BC112240|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##BC113705|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AK301429|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY242354|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##AY267371|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##HQ258347|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8##NM_178170|NEK8|284086|NIMA (never in mitosis gene a)- related kinase 8	0.0	
chr6	139694391	139694477	reg1033293.p1	3.516	+	TSC_hg19_v1_chr6_-_139613136 BX647633 AL834248 AL831988 AK314725 BX647477 BC115383 BC115384 AB085905 NM_153235	-81274	-	BC070068 AB033492 NM_016217 TSC_hg19_v1_chr6_+_139456250	-238178	+	TSC_hg19_v1_chr6_+_139349935 AK309402 AF116682 BC014953	-344516	+	NM_001168389 NM_001168388	989	-	BC004377 U65093 AF109161 TSC_hg19_v1_chr6_-_139695783	1327	-	NM_006079 TSC_hg19_v1_chr6_-_139695784	1350	-	BX647633|TXLNB|167838|taxilin beta##AL834248|TXLNB|167838|taxilin beta##AL831988|TXLNB|167838|taxilin beta##AK314725|TXLNB|167838|taxilin beta##BX647477|TXLNB|167838|taxilin beta##BC115383|TXLNB|167838|taxilin beta##BC115384|TXLNB|167838|taxilin beta##AB085905|TXLNB|167838|taxilin beta##NM_153235|TXLNB|167838|taxilin beta##BC070068|HECA|51696|headcase homolog (Drosophila)##AB033492|HECA|51696|headcase homolog (Drosophila)##NM_016217|HECA|51696|headcase homolog (Drosophila)##AF116682|C6orf115|58527|chromosome 6 open reading frame 115##BC014953|C6orf115|58527|chromosome 6 open reading frame 115##NM_001168389|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_001168388|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##BC004377|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##U65093|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##AF109161|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2##NM_006079|CITED2|10370|Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2	0.0	
chr7	106788203	106788383	reg1004206.p2	3.516	+	TSC_hg19_v1_chr7_+_106685154 BC075800 M31158 NM_002736 AK128639 AK291441 AB384742 AM392728 AM392771 AM393258 AM393700 CU687290	-103090	+	TSC_hg19_v1_chr7_+_106505893 NM_002649 X83368	-282364	+	TSC_hg19_v1_chr7_+_106505782 AK313753 BX648341 BC035683	-282519	+	AK295910 NM_001244262 TSC_hg19_v1_chr7_+_106809447 AK298504 BC017069 NM_012257	21146	+	NM_005295 AK122621 AK307393	322209	+	TSC_hg19_v1_chr7_-_107204366 HQ258000 AF058718	416117	-	BC075800|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##M31158|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##NM_002736|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK128639|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AK291441|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392728|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM392771|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393258|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##AM393700|PRKAR2B|5577|protein kinase, cAMP-dependent, regulatory, type II, beta##NM_002649|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##X83368|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK313753|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BX648341|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##BC035683|PIK3CG|5294|phosphoinositide-3-kinase, catalytic, gamma polypeptide##AK295910|HBP1|26959|HMG-box transcription factor 1##NM_001244262|HBP1|26959|HMG-box transcription factor 1##AK298504|HBP1|26959|HMG-box transcription factor 1##BC017069|HBP1|26959|HMG-box transcription factor 1##NM_012257|HBP1|26959|HMG-box transcription factor 1##NM_005295|GPR22|2845|G protein-coupled receptor 22##AK122621|GPR22|2845|G protein-coupled receptor 22##AK307393|GPR22|2845|G protein-coupled receptor 22##HQ258000|COG5|10466|component of oligomeric golgi complex 5##AF058718|COG5|10466|component of oligomeric golgi complex 5	0.0	
chr7	49283281	49283347	reg1037105.p1	3.516	+	AK126220 AY204751 BX647273 NM_152701	-1072259	+	TSC_hg19_v1_chr7_+_48128951 BC053592 BC047030	-1154359	+	TSC_hg19_v1_chr7_+_48128821 NM_003364 AK297863 BC001405 X90858	-1154514	+	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	529956	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	849510	-	NM_001161834	852367	+	AK126220|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##AY204751|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##NM_152701|ABCA13|154664|ATP-binding cassette, sub-family A (ABC1), member 13##BC053592|UPP1|7378|uridine phosphorylase 1##BC047030|UPP1|7378|uridine phosphorylase 1##NM_003364|UPP1|7378|uridine phosphorylase 1##AK297863|UPP1|7378|uridine phosphorylase 1##BC001405|UPP1|7378|uridine phosphorylase 1##X90858|UPP1|7378|uridine phosphorylase 1##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72	0.520756	CTCF.p2:0:0.521
chr7	69507552	69507691	reg1034667.p1	3.516	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-443033	+	TSC_hg19_v1_chr7_+_69064316 AF326917 AB007902	-443292	+	TSC_hg19_v1_chr7_+_69063768 NM_001127231 BC064693 NM_001127232 NM_015570	-443785	+	TSC_hg19_v1_chr7_+_70231164 AK296981	723584	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	1090167	+	AK123862 TSC_hg19_v1_chr7_-_71801809	2294157	-	BC011643|AUTS2|26053|autism susceptibility candidate 2##AF326917|AUTS2|26053|autism susceptibility candidate 2##AB007902|AUTS2|26053|autism susceptibility candidate 2##NM_001127231|AUTS2|26053|autism susceptibility candidate 2##BC064693|AUTS2|26053|autism susceptibility candidate 2##NM_001127232|AUTS2|26053|autism susceptibility candidate 2##NM_015570|AUTS2|26053|autism susceptibility candidate 2##AK296981|AUTS2|26053|autism susceptibility candidate 2##AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK123862|CALN1|83698|calneuron 1	0.869131	CTCF.p2:0:0.869
chr9	100231189	100231369	reg1006412.p2	3.516	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	-56900	+	TSC_hg19_v1_chr9_+_100174364 NM_014290 BC028694	-57006	+	NM_020893 CR749320	-161341	+	NM_001166116 AK314533	32183	+	TSC_hg19_v1_chr9_+_100263947 BC002660 NM_003275	32659	+	TSC_hg19_v1_chr9_-_100395642 AK094043 AK291199 AX748426 BC035604 BX648493 BX538308 AK128615	164350	-	AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7##NM_014290|TDRD7|23424|tudor domain containing 7##BC028694|TDRD7|23424|tudor domain containing 7##NM_020893|C9orf174|100499483|chromosome 9 open reading frame 174##CR749320|C9orf174|100499483|chromosome 9 open reading frame 174##NM_001166116|TMOD1|7111|tropomodulin 1##AK314533|TMOD1|7111|tropomodulin 1##BC002660|TMOD1|7111|tropomodulin 1##NM_003275|TMOD1|7111|tropomodulin 1##AK094043|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK291199|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BC035604|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX648493|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##BX538308|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2##AK128615|TSTD2|158427|thiosulfate sulfurtransferase (rhodanese)-like domain containing 2	0.0	
chr12	3409282	3409463	reg1010721.p2	3.515	+	NM_001168320 NM_006675 TSC_hg19_v1_chr12_+_3186544 AK223179 AK027366 AF089749 BC071881	-222810	+	TSC_hg19_v1_chr12_+_3069109 BX640921	-340311	+	TSC_hg19_v1_chr12_+_3068645 NM_003213 NM_201441 AY101179 BC015497 AK222947 U63824 NM_201443	-340778	+	AB209027 NM_019854 TSC_hg19_v1_chr12_+_3600458	191069	+	AK125333 TSC_hg19_v1_chr12_-_3601984	192613	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	452896	-	NM_001168320|TSPAN9|10867|tetraspanin 9##NM_006675|TSPAN9|10867|tetraspanin 9##AK223179|TSPAN9|10867|tetraspanin 9##AK027366|TSPAN9|10867|tetraspanin 9##AF089749|TSPAN9|10867|tetraspanin 9##BC071881|TSPAN9|10867|tetraspanin 9##BX640921|TEAD4|7004|TEA domain family member 4##NM_003213|TEAD4|7004|TEA domain family member 4##NM_201441|TEAD4|7004|TEA domain family member 4##AY101179|TEAD4|7004|TEA domain family member 4##BC015497|TEAD4|7004|TEA domain family member 4##AK222947|TEAD4|7004|TEA domain family member 4##U63824|TEAD4|7004|TEA domain family member 4##NM_201443|TEAD4|7004|TEA domain family member 4##AB209027|PRMT8|56341|protein arginine methyltransferase 8##NM_019854|PRMT8|56341|protein arginine methyltransferase 8##AK125333|LOC100129223|100129223|uncharacterized LOC100129223##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B	0.073058	
chr1	37116225	37116331	reg1042762.p1	3.515	+	NM_000760 NM_156039 NM_172313	-167364	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-167794	-	TSC_hg19_v1_chr1_-_36929984 AB049946 AB209905 AK021626 BC031336 AF265439 AK315441 AK302633 NM_031280	-186319	-	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	383497	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	823819	+	TSC_hg19_v1_chr1_+_37940140 AK026884	823872	+	NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AB049946|MRPS15|64960|mitochondrial ribosomal protein S15##AB209905|MRPS15|64960|mitochondrial ribosomal protein S15##AK021626|MRPS15|64960|mitochondrial ribosomal protein S15##BC031336|MRPS15|64960|mitochondrial ribosomal protein S15##AF265439|MRPS15|64960|mitochondrial ribosomal protein S15##AK315441|MRPS15|64960|mitochondrial ribosomal protein S15##AK302633|MRPS15|64960|mitochondrial ribosomal protein S15##NM_031280|MRPS15|64960|mitochondrial ribosomal protein S15##AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.0	
chr14	90526819	90526934	reg1038782.p2	3.515	+	TSC_hg19_v1_chr14_+_90422278 AK001952 BC015474 AK315549 BX161451	-104597	+	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	-104630	+	BC001787 BX247991 AK298930 AK094740 NM_145231	-105816	-	NM_022054 BC012779	1231	+	L02426 NM_002802 TSC_hg19_v1_chr14_+_90722920 AK313325 BC000512 BC016368 AK299121 BC067741 AK222668	196033	+	BC008925 BC033136 BC098568 TSC_hg19_v1_chr14_-_90798286 AK000870 AK294958 BC021805 NM_017970	271490	-	AK001952|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC015474|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##AK315549|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BX161451|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##NM_022054|KCNK13|56659|potassium channel, subfamily K, member 13##BC012779|KCNK13|56659|potassium channel, subfamily K, member 13##L02426|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##NM_002802|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##AK313325|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC000512|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC016368|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##AK299121|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC067741|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##AK222668|PSMC1|5700|proteasome (prosome, macropain) 26S subunit, ATPase, 1##BC008925|C14orf102|55051|chromosome 14 open reading frame 102##BC033136|C14orf102|55051|chromosome 14 open reading frame 102##BC098568|C14orf102|55051|chromosome 14 open reading frame 102##AK000870|C14orf102|55051|chromosome 14 open reading frame 102##AK294958|C14orf102|55051|chromosome 14 open reading frame 102##BC021805|C14orf102|55051|chromosome 14 open reading frame 102##NM_017970|C14orf102|55051|chromosome 14 open reading frame 102	0.986803	CTCF.p2:8:0.815
chr15	40337628	40337808	reg1005819.p2	3.515	+	TSC_hg19_v1_chr15_+_40331506 AK127696	-6240	+	AB451391 CU690086 TSC_hg19_v1_chr15_-_40331370 X73459 BC071716 U07857 BC100031 BC035495 BC051006 AB061546 NM_003134	-6366	-	TSC_hg19_v1_chr15_+_40294764 AK074361	-42922	+	AB590060 AY029254 AY222040 AY222041 CU686755 CU686862 NM_001003942 NM_001003943	60568	-	BC104983 BC104985 BC069328 BC069505 NM_033503 AK024472	60892	-	TSC_hg19_v1_chr15_-_40401076 BC060783 BC070043 NM_001003940	63377	-	AK127696|LOC100131089|100131089|uncharacterized LOC100131089##AB451391|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##X73459|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC071716|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##U07857|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC100031|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC035495|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##BC051006|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AB061546|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##NM_003134|SRP14|6727|signal recognition particle 14kDa (homologous Alu RNA binding protein)##AK074361|EIF2AK4|440275|eukaryotic translation initiation factor 2 alpha kinase 4##AY029254|BMF|90427|Bcl2 modifying factor##AY222040|BMF|90427|Bcl2 modifying factor##AY222041|BMF|90427|Bcl2 modifying factor##NM_001003942|BMF|90427|Bcl2 modifying factor##NM_001003943|BMF|90427|Bcl2 modifying factor##BC104983|BMF|90427|Bcl2 modifying factor##BC104985|BMF|90427|Bcl2 modifying factor##BC069328|BMF|90427|Bcl2 modifying factor##BC069505|BMF|90427|Bcl2 modifying factor##NM_033503|BMF|90427|Bcl2 modifying factor##AK024472|BMF|90427|Bcl2 modifying factor##BC060783|BMF|90427|Bcl2 modifying factor##BC070043|BMF|90427|Bcl2 modifying factor##NM_001003940|BMF|90427|Bcl2 modifying factor	0.0	
chr15	85740886	85740997	reg1043691.p1	3.515	+	AL109778 TSC_hg19_v1_chr15_+_85666316 AL109687	-74623	+	BC075822 TSC_hg19_v1_chr15_+_85525333	-215615	+	NM_002605 NM_173454 AF388183 AF388184 AF388185 AF388186 AF388187 AF332653 TSC_hg19_v1_chr15_+_85525261 BC036190	-215704	+	TSC_hg19_v1_chr15_+_85923835 AK125331 BC050312 NM_006738 NM_007200 AF406992	182950	+	AF127481 NM_144767	479326	+	TSC_hg19_v1_chr15_-_86338156 AL136796 BC028100 AK056663 AK315541 AK092231 AX747419 AY764034	597156	-	AL109778|PDE8A|5151|phosphodiesterase 8A##AL109687|PDE8A|5151|phosphodiesterase 8A##BC075822|PDE8A|5151|phosphodiesterase 8A##NM_002605|PDE8A|5151|phosphodiesterase 8A##NM_173454|PDE8A|5151|phosphodiesterase 8A##AF388183|PDE8A|5151|phosphodiesterase 8A##AF388184|PDE8A|5151|phosphodiesterase 8A##AF388185|PDE8A|5151|phosphodiesterase 8A##AF388186|PDE8A|5151|phosphodiesterase 8A##AF388187|PDE8A|5151|phosphodiesterase 8A##AF332653|PDE8A|5151|phosphodiesterase 8A##BC036190|PDE8A|5151|phosphodiesterase 8A##AK125331|AKAP13|11214|A kinase (PRKA) anchor protein 13##BC050312|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_006738|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_007200|AKAP13|11214|A kinase (PRKA) anchor protein 13##AF406992|AKAP13|11214|A kinase (PRKA) anchor protein 13##NM_144767|AKAP13|11214|A kinase (PRKA) anchor protein 13##AL136796|KLHL25|64410|kelch-like 25 (Drosophila)##BC028100|KLHL25|64410|kelch-like 25 (Drosophila)##AK056663|KLHL25|64410|kelch-like 25 (Drosophila)##AK315541|KLHL25|64410|kelch-like 25 (Drosophila)##AK092231|KLHL25|64410|kelch-like 25 (Drosophila)##AY764034|KLHL25|64410|kelch-like 25 (Drosophila)	0.315969	CTCF.p2:-17:0.316
chr16	4852114	4852266	reg1040170.p1	3.515	+	BC128383 NM_001253793 NM_001253794	-6869	+	BC035868 NM_001253790 BC048326 NM_001253791	-13764	+	BC024017 AX721308 AX721313 BC035619 AK058139 DQ456996 AK098718 DQ517531 EF620906 NM_001154458 NM_144605	-13772	-	CR457355 CR533547 CU680440 AM393155 AB528292 TSC_hg19_v1_chr16_-_4852635 BC012901 AK098348 AL136675 AK026039 NM_024589	444	-	AK296334 TSC_hg19_v1_chr16_-_4852886	708	-	BC048291 AF217521 BC071698 BC073868 TSC_hg19_v1_chr16_-_4855051	2713	-	NM_001253793|LOC440335|440335|uncharacterized LOC440335##NM_001253794|LOC440335|440335|uncharacterized LOC440335##BC035868|LOC440335|440335|uncharacterized LOC440335##NM_001253790|LOC440335|440335|uncharacterized LOC440335##BC048326|LOC440335|440335|uncharacterized LOC440335##NM_001253791|LOC440335|440335|uncharacterized LOC440335##BC024017|SEPT12|124404|septin 12##BC035619|SEPT12|124404|septin 12##AK058139|SEPT12|124404|septin 12##DQ456996|SEPT12|124404|septin 12##AK098718|SEPT12|124404|septin 12##DQ517531|SEPT12|124404|septin 12##EF620906|SEPT12|124404|septin 12##NM_001154458|SEPT12|124404|septin 12##NM_144605|SEPT12|124404|septin 12##CR457355|ROGDI|79641|rogdi homolog (Drosophila)##CR533547|ROGDI|79641|rogdi homolog (Drosophila)##AM393155|ROGDI|79641|rogdi homolog (Drosophila)##BC012901|ROGDI|79641|rogdi homolog (Drosophila)##AK098348|ROGDI|79641|rogdi homolog (Drosophila)##AL136675|ROGDI|79641|rogdi homolog (Drosophila)##AK026039|ROGDI|79641|rogdi homolog (Drosophila)##NM_024589|ROGDI|79641|rogdi homolog (Drosophila)##BC048291|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)##AF217521|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)##BC073868|GLYR1|84656|glyoxylate reductase 1 homolog (Arabidopsis)	0.0	
chr19	43032541	43032721	reg1000348.p1	3.515	+	M76742 S71326 CU677011 AY766113 TSC_hg19_v1_chr19_-_43032631 D90311 X14831 X16354 D90313 J03858 BC024164 BC014473 D12502 D90312 M69176 M72238 AL833584 AK314211 NM_001024912 NM_001184813 NM_001184815 NM_001184816 NM_001205344 NM_001712	-39	-	X16356 TSC_hg19_v1_chr19_-_43031473	-1222	-	BC093946 BC112095 AK292985 AY358433 NM_198477 AY598464	-85507	-	CU693190 DQ891971 DQ895161 X52378 AK297012 BC026263 D90064 M33326 AK312652 NM_001816	66399	-	CU675189 M93061 S59493 DQ896462 EU176443 M34420 M37399 BC005924 NM_021016	211970	-	BC142628 AK300230 CR749812 BC137500 NM_001130167 NM_001130168 NM_182707	237193	-	M76742|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##S71326|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AY766113|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90311|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X14831|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16354|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90313|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##J03858|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC024164|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC014473|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D12502|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##D90312|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M69176|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##M72238|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AL833584|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##AK314211|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001024912|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184813|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184815|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001184816|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001205344|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##NM_001712|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##X16356|CEACAM1|634|carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein)##BC093946|CXCL17|284340|chemokine (C-X-C motif) ligand 17##BC112095|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AK292985|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY358433|CXCL17|284340|chemokine (C-X-C motif) ligand 17##NM_198477|CXCL17|284340|chemokine (C-X-C motif) ligand 17##AY598464|CXCL17|284340|chemokine (C-X-C motif) ligand 17##DQ891971|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##DQ895161|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##X52378|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK297012|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##BC026263|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##D90064|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M33326|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##AK312652|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##NM_001816|CEACAM8|1088|carcinoembryonic antigen-related cell adhesion molecule 8##M93061|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##S59493|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##DQ896462|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##EU176443|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M34420|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##M37399|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC005924|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##NM_021016|PSG3|5671|pregnancy specific beta-1-glycoprotein 3##BC142628|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##AK300230|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##CR749812|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##BC137500|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130167|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_001130168|PSG8|440533|pregnancy specific beta-1-glycoprotein 8##NM_182707|PSG8|440533|pregnancy specific beta-1-glycoprotein 8	0.114074	
chr3	178689433	178689522	reg1041994.p1	3.515	+	AF209747 NM_005832	-412925	+	BC017825 NM_181361	-435254	+	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	-1774418	-	TSC_hg19_v1_chr3_-_178789594 AK122768 AF355465 AK022358 BC002896	100088	-	TSC_hg19_v1_chr3_-_178789598 NM_022470 NM_152240	100149	-	TSC_hg19_v1_chr3_+_178866144 NM_006218 AK292940	176761	+	AF209747|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_005832|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##BC017825|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##NM_181361|KCNMB2|10242|potassium large conductance calcium-activated channel, subfamily M, beta member 2##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK122768|ZMAT3|64393|zinc finger, matrin-type 3##AF355465|ZMAT3|64393|zinc finger, matrin-type 3##AK022358|ZMAT3|64393|zinc finger, matrin-type 3##BC002896|ZMAT3|64393|zinc finger, matrin-type 3##NM_022470|ZMAT3|64393|zinc finger, matrin-type 3##NM_152240|ZMAT3|64393|zinc finger, matrin-type 3##NM_006218|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide##AK292940|PIK3CA|5290|phosphoinositide-3-kinase, catalytic, alpha polypeptide	0.0	
chr4	14145663	14145796	reg1036057.p1	3.515	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-516412	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-596315	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-599654	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	857980	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	858266	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	858568	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.017951	
chr5	127418517	127418610	reg1035663.p1	3.515	+	NM_001127385 AB219832 BC071790	-429838	+	NM_001048252 AB219764	-433840	+	AK090486 EU831910 EU832004 CU677817 TSC_hg19_v1_chr5_+_126859232	-559369	+	TSC_hg19_v1_chr5_-_127418765 AF088062 BX648677 BC036629	200	-	AK090949 AX746698 TSC_hg19_v1_chr5_-_127419417	796	-	TSC_hg19_v1_chr5_+_127419457 AY280459 NM_001046 U30246 BC033003 BC144221 BC146839	910	+	NM_001127385|CTXN3|613212|cortexin 3##AB219832|CTXN3|613212|cortexin 3##BC071790|CTXN3|613212|cortexin 3##NM_001048252|CTXN3|613212|cortexin 3##AB219764|CTXN3|613212|cortexin 3##AK090486|PRRC1|133619|proline-rich coiled-coil 1##EU831910|PRRC1|133619|proline-rich coiled-coil 1##EU832004|PRRC1|133619|proline-rich coiled-coil 1##AF088062|FLJ33630|644873|uncharacterized LOC644873##BX648677|FLJ33630|644873|uncharacterized LOC644873##BC036629|FLJ33630|644873|uncharacterized LOC644873##AK090949|FLJ33630|644873|uncharacterized LOC644873##AY280459|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##NM_001046|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##U30246|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC033003|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC144221|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2##BC146839|SLC12A2|6558|solute carrier family 12 (sodium/potassium/chloride transporters), member 2	0.0	
chr8	102964725	102964884	reg1042784.p1	3.515	+	NM_032041	-161366	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-161604	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-161621	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	171719	-	NM_001040630	172330	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	286369	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.0	
chr9	129946514	129946614	reg1019030.p1	3.515	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-61534	-	TSC_hg19_v1_chr9_-_129884962 AK312876	-61602	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	-61656	-	NM_032293 AK293732 AK095679	80243	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	212882	+	TSC_hg19_v1_chr9_-_130186602 AK124330	240002	-	NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8	0.024919	
chr11	46287560	46287710	reg1033951.p2	3.514	+	TSC_hg19_v1_chr11_-_46142986 AK023258 NM_001101802 NM_016621	-144638	-	TSC_hg19_v1_chr11_+_45944226 BC037291	-343419	+	AK055829 AK096021 NM_152312	-344452	+	TSC_hg19_v1_chr11_+_46299212 AK314072 NM_052854	11570	+	BC014097 TSC_hg19_v1_chr11_+_46299557 BC015781 AB063321	11925	+	TSC_hg19_v1_chr11_+_46299596 AB463458 CU680776 DQ895809 EU176365	11988	+	AK023258|PHF21A|51317|PHD finger protein 21A##NM_001101802|PHF21A|51317|PHD finger protein 21A##NM_016621|PHF21A|51317|PHD finger protein 21A##BC037291|GYLTL1B|120071|glycosyltransferase-like 1B##AK055829|GYLTL1B|120071|glycosyltransferase-like 1B##AK096021|GYLTL1B|120071|glycosyltransferase-like 1B##NM_152312|GYLTL1B|120071|glycosyltransferase-like 1B##AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	0.010656	
chr11	51263988	51264095	reg1041692.p1	3.514	+	BC136850 BC136851 NM_001005270	-1259971	-	BC137005 NM_001001955	-1290099	+	TSC_hg19_v1_chr11_-_49230053 DQ088979 AF176574 BC025672 AK312366 AK295368 AK295470 AK300532 M99487 NM_001014986 NM_001193471 NM_001193472 NM_001193473 NM_004476 S76978	-2033934	-	BC140750 NM_001005272	148406	-	NM_001004703	251240	+	AF521869 BC001862 NM_024114	3765616	+	BC136850|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC136851|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##NM_001005270|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC137005|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13##NM_001001955|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13##DQ088979|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AF176574|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##BC025672|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK312366|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK295368|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK295470|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK300532|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##M99487|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001014986|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193471|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193472|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193473|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_004476|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##S76978|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##BC140750|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##NM_001005272|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##NM_001004703|OR4C46|119749|olfactory receptor, family 4, subfamily C, member 46##AF521869|TRIM48|79097|tripartite motif containing 48##BC001862|TRIM48|79097|tripartite motif containing 48##NM_024114|TRIM48|79097|tripartite motif containing 48	0.830068	CTCF.p2:-3:0.830
chr1	242161988	242162091	reg1014217.p2	3.514	+	NM_003686 NM_006027 AF042282 AF091740 AF060479 AF084974	-149954	+	BC007491 TSC_hg19_v1_chr1_+_242011556	-150489	+	TSC_hg19_v1_chr1_+_242011520 NM_130398 AK291291	-150535	+	BC132986 BC132988 AF276659 BC127722 NM_001004343	335	-	AK091691 AX747130 AK307857 AK295421 AY461578 NM_001195811 NM_001195812	450731	-	AK098092 NM_152666	525958	-	NM_003686|EXO1|9156|exonuclease 1##NM_006027|EXO1|9156|exonuclease 1##AF042282|EXO1|9156|exonuclease 1##AF091740|EXO1|9156|exonuclease 1##AF060479|EXO1|9156|exonuclease 1##AF084974|EXO1|9156|exonuclease 1##BC007491|EXO1|9156|exonuclease 1##NM_130398|EXO1|9156|exonuclease 1##AK291291|EXO1|9156|exonuclease 1##BC132986|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC132988|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AF276659|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##BC127722|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##NM_001004343|MAP1LC3C|440738|microtubule-associated protein 1 light chain 3 gamma##AK091691|PLD5|200150|phospholipase D family, member 5##AK307857|PLD5|200150|phospholipase D family, member 5##AK295421|PLD5|200150|phospholipase D family, member 5##AY461578|PLD5|200150|phospholipase D family, member 5##NM_001195811|PLD5|200150|phospholipase D family, member 5##NM_001195812|PLD5|200150|phospholipase D family, member 5##AK098092|PLD5|200150|phospholipase D family, member 5##NM_152666|PLD5|200150|phospholipase D family, member 5	0.0	
chr15	101488472	101488652	reg1032204.p2	3.514	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-29050	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-29088	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-68491	+	AB071402 TSC_hg19_v1_chr15_-_101791795	303174	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	303573	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	329101	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.0	
chr17	16828101	16828181	reg1045357.p1	3.514	+	TSC_hg19_v1_chr17_+_16593572 EF553518 BC133019 BC144224 BC144225 NM_014695	-234537	+	AK131401 NM_020787	-270980	-	AF217227 TSC_hg19_v1_chr17_-_16472519 BC041159 BC057791 NM_020653	-355645	-	AY302137 AK301032 AX772740 AK303298 BC109392 AF023614 AK223453 AX766384 NM_012452 AK313302	47263	-	TSC_hg19_v1_chr17_+_16945770 NM_015134 NM_201274 BC136479 AB098507 AB384537 AB189741 AY296247	117823	+	TSC_hg19_v1_chr17_-_17109624 AK090899 AX746668	281472	-	EF553518|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC133019|CCDC144A|9720|coiled-coil domain containing 144A##BC144224|CCDC144A|9720|coiled-coil domain containing 144A##BC144225|CCDC144A|9720|coiled-coil domain containing 144A##NM_014695|CCDC144A|9720|coiled-coil domain containing 144A##AK131401|ZNF624|57547|zinc finger protein 624##NM_020787|ZNF624|57547|zinc finger protein 624##AF217227|ZNF287|57336|zinc finger protein 287##BC041159|ZNF287|57336|zinc finger protein 287##BC057791|ZNF287|57336|zinc finger protein 287##NM_020653|ZNF287|57336|zinc finger protein 287##AY302137|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##BC109392|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AF023614|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK223453|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AX766384|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_012452|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##AK313302|TNFRSF13B|23495|tumor necrosis factor receptor superfamily, member 13B##NM_015134|MPRIP|23164|myosin phosphatase Rho interacting protein##NM_201274|MPRIP|23164|myosin phosphatase Rho interacting protein##BC136479|MPRIP|23164|myosin phosphatase Rho interacting protein##AB098507|MPRIP|23164|myosin phosphatase Rho interacting protein##AB189741|MPRIP|23164|myosin phosphatase Rho interacting protein##AY296247|MPRIP|23164|myosin phosphatase Rho interacting protein##AK090899|PLD6|201164|phospholipase D family, member 6	0.0	
chr20	47033459	47033594	reg1040791.p1	3.514	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-618208	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-618774	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-902842	+	AB037836 TSC_hg19_v1_chr20_-_47444291	410760	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	410913	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	504792	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr20	52532203	52532287	reg1003157.p3	3.514	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-321446	-	AF041259 NM_006526	-332610	-	AK302570 NM_001193421	-730424	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	154817	-	AK315220 NM_003657	155058	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	258275	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr2	185720107	185720198	reg1045398.p2	3.514	+	BC136602 TSC_hg19_v1_chr2_+_185463544	-256660	+	BC142612 TSC_hg19_v1_chr2_+_185463319	-256847	+	BC150198 TSC_hg19_v1_chr2_+_185463252 AK131402	-256909	+	NM_173651	883202	+	TSC_hg19_v1_chr2_+_187350986 AF220184 NM_018471 AK298615 AK001901 AK297658 AF289586	1630778	+	TSC_hg19_v1_chr2_+_187351010 BC012336 AF161421 AF109366	1630858	+	BC136602|ZNF804A|91752|zinc finger protein 804A##BC142612|ZNF804A|91752|zinc finger protein 804A##BC150198|ZNF804A|91752|zinc finger protein 804A##AK131402|ZNF804A|91752|zinc finger protein 804A##NM_173651|FSIP2|401024|fibrous sheath interacting protein 2##AF220184|ZC3H15|55854|zinc finger CCCH-type containing 15##NM_018471|ZC3H15|55854|zinc finger CCCH-type containing 15##AK298615|ZC3H15|55854|zinc finger CCCH-type containing 15##AK001901|ZC3H15|55854|zinc finger CCCH-type containing 15##AK297658|ZC3H15|55854|zinc finger CCCH-type containing 15##AF289586|ZC3H15|55854|zinc finger CCCH-type containing 15##BC012336|ZC3H15|55854|zinc finger CCCH-type containing 15##AF161421|ZC3H15|55854|zinc finger CCCH-type containing 15##AF109366|ZC3H15|55854|zinc finger CCCH-type containing 15	0.0	
chr2	65140522	65140620	reg1034130.p1	3.514	+	TSC_hg19_v1_chr2_-_65090764 AK097952	-49830	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-259524	-	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-259722	-	TSC_hg19_v1_chr2_-_65159574 BC037562	19006	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	75029	+	TSC_hg19_v1_chr2_+_65216485 AK298472 AK315986 NM_003038	75920	+	D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##BC037562|LOC400958|400958|uncharacterized LOC400958##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK298472|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK315986|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##NM_003038|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.988341	CTCF.p2:0:0.988
chr3	49044761	49044935	reg1042775.p1	3.514	+	AK295145 NM_018031 TSC_hg19_v1_chr3_+_49044739	-232	+	BC060321 TSC_hg19_v1_chr3_+_49027877 CU680020 AK000269	-16988	+	TSC_hg19_v1_chr3_+_49027682 BC047566 NM_177938 NM_177939 AL713728 BC011710 AY198406 BC018731	-17347	+	TSC_hg19_v1_chr3_+_49044855 AK296387 AF099100 AK001080 AK092079 AX747346 AK297090 AK309913 AK225653 BC113467 BC143486 BC143488 BC101707 BC002826 AK304117	43	+	TSC_hg19_v1_chr3_-_49056011 BC054493 CU691092 BC014099 GQ129423 GQ129424 BC047683 BC032440 AK093054 AK301352 AX747889 AK001358 NM_001009996	11123	-	NM_199074	13059	+	AK295145|WDR6|11180|WD repeat domain 6##NM_018031|WDR6|11180|WD repeat domain 6##BC060321|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AK000269|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC047566|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##NM_177938|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##NM_177939|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AL713728|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC011710|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AY198406|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##BC018731|P4HTM|54681|prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)##AK296387|WDR6|11180|WD repeat domain 6##AF099100|WDR6|11180|WD repeat domain 6##AK001080|WDR6|11180|WD repeat domain 6##AK092079|WDR6|11180|WD repeat domain 6##AK297090|WDR6|11180|WD repeat domain 6##AK309913|WDR6|11180|WD repeat domain 6##AK225653|WDR6|11180|WD repeat domain 6##BC113467|WDR6|11180|WD repeat domain 6##BC143486|WDR6|11180|WD repeat domain 6##BC143488|WDR6|11180|WD repeat domain 6##BC101707|WDR6|11180|WD repeat domain 6##BC002826|WDR6|11180|WD repeat domain 6##AK304117|WDR6|11180|WD repeat domain 6##BC054493|DALRD3|55152|DALR anticodon binding domain containing 3##BC014099|DALRD3|55152|DALR anticodon binding domain containing 3##GQ129423|DALRD3|55152|DALR anticodon binding domain containing 3##GQ129424|DALRD3|55152|DALR anticodon binding domain containing 3##BC047683|DALRD3|55152|DALR anticodon binding domain containing 3##BC032440|DALRD3|55152|DALR anticodon binding domain containing 3##AK093054|DALRD3|55152|DALR anticodon binding domain containing 3##AK301352|DALRD3|55152|DALR anticodon binding domain containing 3##AK001358|DALRD3|55152|DALR anticodon binding domain containing 3##NM_001009996|DALRD3|55152|DALR anticodon binding domain containing 3##NM_199074|NDUFAF3|25915|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 3	0.0	
chr3	72772490	72772662	reg1035882.p1	3.514	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-938305	-	AK313656 NM_173359	-968653	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-969054	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	124972	-	BC017274 TSC_hg19_v1_chr3_-_72897575	124999	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	125016	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr4	178801161	178801254	reg1029283.p1	3.514	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-437564	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-437614	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-437666	-	TSC_hg19_v1_chr4_+_183065111 AK308489	4263918	+	NM_001080477 HE578284 HE578285	4443947	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	5037323	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.089352	
chr7	143260636	143260740	reg1035408.p2	3.514	+	BC101157 BC101158 NM_176883	-85723	+	AB529260 BC100938 BC100939 BC100940 BC100941 NM_177437	-120143	+	EU826604 EU826605 TSC_hg19_v1_chr7_-_143105950 AK290351 AK313263 BC130291 BC144156 M18391 NM_005232	-154748	-	BC043153 BC110410 NM_001008747 BC146818 BC150314	8203	+	BC041464 AK315909 NM_001130025 AK098041 AK297123 AL832734 BC033189	57374	+	BC113530 BC117233 NM_173678 AY167570 BC010225	57854	+	BC101157|TAS2R41|259287|taste receptor, type 2, member 41##BC101158|TAS2R41|259287|taste receptor, type 2, member 41##NM_176883|TAS2R41|259287|taste receptor, type 2, member 41##BC100938|TAS2R60|338398|taste receptor, type 2, member 60##BC100939|TAS2R60|338398|taste receptor, type 2, member 60##BC100940|TAS2R60|338398|taste receptor, type 2, member 60##BC100941|TAS2R60|338398|taste receptor, type 2, member 60##NM_177437|TAS2R60|338398|taste receptor, type 2, member 60##EU826604|EPHA1|2041|EPH receptor A1##EU826605|EPHA1|2041|EPH receptor A1##AK290351|EPHA1|2041|EPH receptor A1##AK313263|EPHA1|2041|EPH receptor A1##BC130291|EPHA1|2041|EPH receptor A1##BC144156|EPHA1|2041|EPH receptor A1##M18391|EPHA1|2041|EPH receptor A1##NM_005232|EPHA1|2041|EPH receptor A1##BC043153|CTAGE6P|340307|CTAGE family, member 6, pseudogene##BC110410|CTAGE6P|340307|CTAGE family, member 6, pseudogene##NM_001008747|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC146818|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC150314|CTAGE15P|441294|CTAGE family, member 15, pseudogene##BC041464|LOC154761|154761|uncharacterized LOC154761##NM_001130025|FAM115C|285966|family with sequence similarity 115, member C##AK098041|FAM115C|285966|family with sequence similarity 115, member C##AK297123|LOC154761|154761|uncharacterized LOC154761##AL832734|FAM115C|285966|family with sequence similarity 115, member C##BC033189|LOC154761|154761|uncharacterized LOC154761##BC113530|FAM115C|285966|family with sequence similarity 115, member C##BC117233|FAM115C|285966|family with sequence similarity 115, member C##NM_173678|FAM115C|285966|family with sequence similarity 115, member C##AY167570|FAM115C|285966|family with sequence similarity 115, member C##BC010225|LOC154761|154761|uncharacterized LOC154761	0.956428	CTCF.p2:18:0.956
chrX	56805443	56805594	reg1013440.p3	3.514	+	TSC_hg19_v1_chrX_+_56755698 BX537532 BC048131 BC053960 BC053962 BC062451	-49827	+	TSC_hg19_v1_chrX_+_56590029 NM_013444 BC069237 AK297252 AK302885 AF189009	-215467	+	TSC_hg19_v1_chrX_+_56258818 NM_007250 BC063276 AK296156 NM_001159296 BX641066	-546608	+	TSC_hg19_v1_chrX_-_57021949 BC032490 AK304047 BC018073 AL832091 NM_001010862 AK123122	216453	-	AF356353 TSC_hg19_v1_chrX_-_57147913 BC071974 BC000044 AK311172 NM_001006681 NM_001006682 NM_001006683	342410	-	BC071694 NM_019003	358539	-	BX537532|LOC550643|550643|uncharacterized LOC550643##BC048131|LOC550643|550643|uncharacterized LOC550643##BC053960|LOC550643|550643|uncharacterized LOC550643##BC053962|LOC550643|550643|uncharacterized LOC550643##BC062451|LOC550643|550643|uncharacterized LOC550643##NM_013444|UBQLN2|29978|ubiquilin 2##BC069237|UBQLN2|29978|ubiquilin 2##AK297252|UBQLN2|29978|ubiquilin 2##AK302885|UBQLN2|29978|ubiquilin 2##AF189009|UBQLN2|29978|ubiquilin 2##NM_007250|KLF8|11279|Kruppel-like factor 8##BC063276|KLF8|11279|Kruppel-like factor 8##AK296156|KLF8|11279|Kruppel-like factor 8##NM_001159296|KLF8|11279|Kruppel-like factor 8##BX641066|KLF8|11279|Kruppel-like factor 8##BC032490|SPIN3|169981|spindlin family, member 3##AK304047|SPIN3|169981|spindlin family, member 3##BC018073|SPIN3|169981|spindlin family, member 3##AL832091|SPIN3|169981|spindlin family, member 3##NM_001010862|SPIN3|169981|spindlin family, member 3##AK123122|SPIN3|169981|spindlin family, member 3##AF356353|SPIN2B|474343|spindlin family, member 2B##BC071974|SPIN2B|474343|spindlin family, member 2B##BC000044|SPIN2B|474343|spindlin family, member 2B##NM_001006681|SPIN2B|474343|spindlin family, member 2B##NM_001006682|SPIN2B|474343|spindlin family, member 2B##NM_001006683|SPIN2B|474343|spindlin family, member 2B##BC071694|SPIN2A|54466|spindlin family, member 2A##NM_019003|SPIN2A|54466|spindlin family, member 2A	0.0	
chr10	14029552	14029733	reg1041106.p2	3.513	+	TSC_hg19_v1_chr10_-_13749648 AK057828	-279953	-	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-400655	+	NM_003675 TSC_hg19_v1_chr10_+_13628948	-400699	+	TSC_hg19_v1_chr10_-_14050453 AK001072	20850	-	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	343208	-	TSC_hg19_v1_chr10_-_14646259 BC064407	616675	-	AK057828|FRMD4A|55691|FERM domain containing 4A##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK001072|FRMD4A|55691|FERM domain containing 4A##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B	0.0	
chr1	201140360	201140452	reg1046400.p2	3.513	+	AK075335 AY138587 AK296307 TSC_hg19_v1_chr1_-_201123603 BC001106 AL136600 AK054883 AK303843 NM_016456	-16794	-	TSC_hg19_v1_chr1_-_201123569 AK091726	-16835	-	L33798 NM_000069	-58713	-	BC033185 NM_001164586	19546	+	NM_000299 NM_001005337 Z34974 AK315291 X79293 BC114571 BC115702	112231	+	TSC_hg19_v1_chr1_-_201342319 X79855 X79856 X79858 CU678094 S64668 X74819 X79859	201974	-	AK075335|TMEM9|252839|transmembrane protein 9##AY138587|TMEM9|252839|transmembrane protein 9##AK296307|TMEM9|252839|transmembrane protein 9##BC001106|TMEM9|252839|transmembrane protein 9##AL136600|TMEM9|252839|transmembrane protein 9##AK054883|TMEM9|252839|transmembrane protein 9##AK303843|TMEM9|252839|transmembrane protein 9##NM_016456|TMEM9|252839|transmembrane protein 9##AK091726|TMEM9|252839|transmembrane protein 9##L33798|CACNA1S|779|calcium channel, voltage-dependent, L type, alpha 1S subunit##NM_000069|CACNA1S|779|calcium channel, voltage-dependent, L type, alpha 1S subunit##BC033185|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##NM_001164586|IGFN1|91156|immunoglobulin-like and fibronectin type III domain containing 1##NM_000299|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##NM_001005337|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##Z34974|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##AK315291|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##X79293|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC114571|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##BC115702|PKP1|5317|plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)##X79855|TNNT2|7139|troponin T type 2 (cardiac)##X79856|TNNT2|7139|troponin T type 2 (cardiac)##X79858|TNNT2|7139|troponin T type 2 (cardiac)##S64668|TNNT2|7139|troponin T type 2 (cardiac)##X74819|TNNT2|7139|troponin T type 2 (cardiac)##X79859|TNNT2|7139|troponin T type 2 (cardiac)	0.0	
chr1	243871826	243871916	reg1008448.p2	3.513	+	TSC_hg19_v1_chr1_+_243419405 AK297105 AF250731	-452436	+	BC032454 TSC_hg19_v1_chr1_+_243419371 AK299249	-452500	+	TSC_hg19_v1_chr1_+_243419357 AK299212	-452516	+	AF135794 AB463341 AM392791 AM392849 AJ245709 AF124141 AK308052 BC020479 AF085234 AY005799 BC121154 NM_005465 NM_181690	134656	-	AL117525 NM_001206729	135014	-	TSC_hg19_v1_chr1_+_244214553 NM_205768	342685	+	AK297105|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF250731|SDCCAG8|10806|serologically defined colon cancer antigen 8##BC032454|SDCCAG8|10806|serologically defined colon cancer antigen 8##AK299249|SDCCAG8|10806|serologically defined colon cancer antigen 8##AK299212|SDCCAG8|10806|serologically defined colon cancer antigen 8##AF135794|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392791|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AM392849|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AJ245709|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF124141|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AK308052|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC020479|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AF085234|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AY005799|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##BC121154|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_005465|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_181690|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##AL117525|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_001206729|AKT3|10000|v-akt murine thymoma viral oncogene homolog 3 (protein kinase B, gamma)##NM_205768|ZNF238|10472|zinc finger protein 238	0.0	
chr13	99182793	99182903	reg1039700.p2	3.513	+	AF083420 NM_003576	-8553	-	TSC_hg19_v1_chr13_+_99058147 AF339817	-124642	+	AB464689 EU446571 AF539427 BC025388 BC017585 NM_178861	-353343	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	46206	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	46274	-	TSC_hg19_v1_chr13_-_99229363 BC035578 BC065378 NM_001032296	46463	-	AF083420|STK24|8428|serine/threonine kinase 24##NM_003576|STK24|8428|serine/threonine kinase 24##EU446571|RNF113B|140432|ring finger protein 113B##AF539427|RNF113B|140432|ring finger protein 113B##BC025388|RNF113B|140432|ring finger protein 113B##BC017585|RNF113B|140432|ring finger protein 113B##NM_178861|RNF113B|140432|ring finger protein 113B##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24##BC035578|STK24|8428|serine/threonine kinase 24##BC065378|STK24|8428|serine/threonine kinase 24##NM_001032296|STK24|8428|serine/threonine kinase 24	0.0	
chr15	101665568	101665669	reg1039079.p2	3.513	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-206106	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-206144	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-245547	+	AB071402 TSC_hg19_v1_chr15_-_101791795	126118	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	126517	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	152045	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.0	
chr16	30569629	30569728	reg1033241.p1	3.513	+	EU446557 BC008821 AK093992 AX748400 NM_001172679 NM_033410 TSC_hg19_v1_chr16_-_30569709	-70	-	TSC_hg19_v1_chr16_-_30546234 AB209546 AK299308 AK054567 BC001361 NM_023931 AK316254	-23488	-	TSC_hg19_v1_chr16_-_30546003 AK292192	-23678	-	EU446577 TSC_hg19_v1_chr16_-_30583034 BC018997	13344	-	NM_001024683 NM_145271	14049	-	TSC_hg19_v1_chr16_-_30597103 AK309511 EU446576 AK292465 BC040642 AK298848 AK056692 NM_152458	27297	-	EU446557|ZNF764|92595|zinc finger protein 764##BC008821|ZNF764|92595|zinc finger protein 764##AK093992|ZNF764|92595|zinc finger protein 764##NM_001172679|ZNF764|92595|zinc finger protein 764##NM_033410|ZNF764|92595|zinc finger protein 764##AB209546|ZNF747|65988|zinc finger protein 747##AK054567|ZNF747|65988|zinc finger protein 747##BC001361|ZNF747|65988|zinc finger protein 747##NM_023931|ZNF747|65988|zinc finger protein 747##AK292192|ZNF747|65988|zinc finger protein 747##EU446577|ZNF688|146542|zinc finger protein 688##BC018997|ZNF688|146542|zinc finger protein 688##NM_001024683|ZNF688|146542|zinc finger protein 688##NM_145271|ZNF688|146542|zinc finger protein 688##AK309511|ZNF785|146540|zinc finger protein 785##EU446576|ZNF785|146540|zinc finger protein 785##AK292465|ZNF785|146540|zinc finger protein 785##BC040642|ZNF785|146540|zinc finger protein 785##AK298848|ZNF785|146540|zinc finger protein 785##AK056692|ZNF785|146540|zinc finger protein 785##NM_152458|ZNF785|146540|zinc finger protein 785	0.0	
chr16	31191426	31191546	reg1040586.p1	3.513	+	TSC_hg19_v1_chr16_+_31191463 BC000402	-22	+	AK299129 TSC_hg19_v1_chr16_+_31191461	-25	+	AK130774 S62138 S62140 TSC_hg19_v1_chr16_+_31191459 AK098774 AK290936 AK301110	-28	+	AB208902 TSC_hg19_v1_chr16_+_31191471 X71428 X71427 BC026062 BC002459 U00942 AB527797 BT007131 CR456747 DQ891705 DQ894882 U36561	16	+	BC013569 AF310103 AB464112 TSC_hg19_v1_chr16_-_31214046 AK000211	22540	-	TSC_hg19_v1_chr16_-_31214064 AF384665 AF184073 AF255794 AK314422 AB023416 NM_013258 NM_145182 BC004470	22664	-	BC000402|FUS|2521|fused in sarcoma##AK299129|FUS|2521|fused in sarcoma##AK130774|FUS|2521|fused in sarcoma##S62140|FUS|2521|fused in sarcoma##AK098774|FUS|2521|fused in sarcoma##AK290936|FUS|2521|fused in sarcoma##AK301110|FUS|2521|fused in sarcoma##AB208902|FUS|2521|fused in sarcoma##X71428|FUS|2521|fused in sarcoma##BC026062|FUS|2521|fused in sarcoma##BC002459|FUS|2521|fused in sarcoma##U00942|FUS|2521|fused in sarcoma##BT007131|FUS|2521|fused in sarcoma##CR456747|FUS|2521|fused in sarcoma##DQ891705|FUS|2521|fused in sarcoma##DQ894882|FUS|2521|fused in sarcoma##U36561|FUS|2521|fused in sarcoma##BC013569|PYCARD|29108|PYD and CARD domain containing##AF310103|PYCARD|29108|PYD and CARD domain containing##AK000211|PYCARD|29108|PYD and CARD domain containing##AF384665|PYCARD|29108|PYD and CARD domain containing##AF184073|PYCARD|29108|PYD and CARD domain containing##AF255794|PYCARD|29108|PYD and CARD domain containing##AK314422|PYCARD|29108|PYD and CARD domain containing##AB023416|PYCARD|29108|PYD and CARD domain containing##NM_013258|PYCARD|29108|PYD and CARD domain containing##NM_145182|PYCARD|29108|PYD and CARD domain containing##BC004470|PYCARD|29108|PYD and CARD domain containing	0.0	
chr19	45017130	45017229	reg1038104.p2	3.513	+	BC113015 BC051903 TSC_hg19_v1_chr19_-_45004551 BC033642 AF192913 AK024047 AK122688 AK315193 NM_013256	-12637	-	TSC_hg19_v1_chr19_-_44952641 AB209357 AF192979 NM_014518 CR936724	-64482	-	AL833447 TSC_hg19_v1_chr19_-_44905779 AK302594 NM_152354	-111411	-	EU008600 EU008601 EU008602 EU008603 NM_001102597 NM_001102598 NM_001102599 NM_001102600	16368	-	TSC_hg19_v1_chr19_+_45116925 NM_001205280	99751	+	TSC_hg19_v1_chr19_+_45147159 NM_001135768 NM_001135769 NM_001135770 NM_006505	129952	+	BC113015|ZNF180|7733|zinc finger protein 180##BC051903|ZNF180|7733|zinc finger protein 180##BC033642|ZNF180|7733|zinc finger protein 180##AF192913|ZNF180|7733|zinc finger protein 180##AK024047|ZNF180|7733|zinc finger protein 180##AK122688|ZNF180|7733|zinc finger protein 180##AK315193|ZNF180|7733|zinc finger protein 180##NM_013256|ZNF180|7733|zinc finger protein 180##AB209357|ZNF229|7772|zinc finger protein 229##AF192979|ZNF229|7772|zinc finger protein 229##NM_014518|ZNF229|7772|zinc finger protein 229##CR936724|ZNF229|7772|zinc finger protein 229##AL833447|ZNF285|26974|zinc finger protein 285##AK302594|ZFP112|7771|zinc finger protein 112 homolog (mouse)##NM_152354|ZNF285|26974|zinc finger protein 285##EU008600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##EU008601|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##EU008602|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##EU008603|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001102597|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001102598|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001102599|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001102600|CEACAM20|125931|carcinoembryonic antigen-related cell adhesion molecule 20##NM_001205280|IGSF23|147710|immunoglobulin superfamily, member 23##NM_001135768|PVR|5817|poliovirus receptor##NM_001135769|PVR|5817|poliovirus receptor##NM_001135770|PVR|5817|poliovirus receptor##NM_006505|PVR|5817|poliovirus receptor	0.998892	CTCF.p2:2:0.999
chr2	101223634	101223740	reg1007980.p2	3.513	+	TSC_hg19_v1_chr2_+_101179454 NM_024065 BC001021 AK300827 AF110511 AF267853	-44251	+	AB164464 NM_001011717	-136744	+	TSC_hg19_v1_chr2_-_101034114 BC010441 AF033827 NM_004854	-189590	-	TSC_hg19_v1_chr2_+_101436610 NM_002518 U77970 BC072383 BC051351	213079	+	NM_000993 NM_001098577 NM_001099693 TSC_hg19_v1_chr2_+_101618754 AK297247 AK297483 BC070210 BC070373 AK297167 AK311775	395035	+	AB449889 TSC_hg19_v1_chr2_-_101767845 AK300533 NM_001102426	544096	-	NM_024065|PDCL3|79031|phosducin-like 3##BC001021|PDCL3|79031|phosducin-like 3##AK300827|PDCL3|79031|phosducin-like 3##AF110511|PDCL3|79031|phosducin-like 3##AF267853|PDCL3|79031|phosducin-like 3##AB164464|NMS|129521|neuromedin S##NM_001011717|NMS|129521|neuromedin S##BC010441|CHST10|9486|carbohydrate sulfotransferase 10##AF033827|CHST10|9486|carbohydrate sulfotransferase 10##NM_004854|CHST10|9486|carbohydrate sulfotransferase 10##NM_002518|NPAS2|4862|neuronal PAS domain protein 2##U77970|NPAS2|4862|neuronal PAS domain protein 2##BC072383|NPAS2|4862|neuronal PAS domain protein 2##BC051351|NPAS2|4862|neuronal PAS domain protein 2##NM_000993|RPL31|6160|ribosomal protein L31##NM_001098577|RPL31|6160|ribosomal protein L31##NM_001099693|RPL31|6160|ribosomal protein L31##AK297483|RPL31|6160|ribosomal protein L31##BC070210|RPL31|6160|ribosomal protein L31##BC070373|RPL31|6160|ribosomal protein L31##AK311775|RPL31|6160|ribosomal protein L31##AB449889|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##AK300533|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)##NM_001102426|TBC1D8|11138|TBC1 domain family, member 8 (with GRAM domain)	0.0	
chr2	102691007	102691129	reg1040912.p2	3.513	+	BC027733 BC012346 NM_173343	-75611	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	-82705	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	-182536	+	TSC_hg19_v1_chr2_+_102759205 X16896	68164	+	M27492 NM_000877 BC067507 BC067508 BC067506 BC075062 BC075063	79352	+	AF284434 NM_003854 U49065 BC107064	112380	+	BC027733|IL1R2|7850|interleukin 1 receptor, type II##BC012346|IL1R2|7850|interleukin 1 receptor, type II##NM_173343|IL1R2|7850|interleukin 1 receptor, type II##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##X16896|IL1R1|3554|interleukin 1 receptor, type I##M27492|IL1R1|3554|interleukin 1 receptor, type I##NM_000877|IL1R1|3554|interleukin 1 receptor, type I##BC067507|IL1R1|3554|interleukin 1 receptor, type I##BC067508|IL1R1|3554|interleukin 1 receptor, type I##BC067506|IL1R1|3554|interleukin 1 receptor, type I##BC075062|IL1R1|3554|interleukin 1 receptor, type I##BC075063|IL1R1|3554|interleukin 1 receptor, type I##AF284434|IL1RL2|8808|interleukin 1 receptor-like 2##NM_003854|IL1RL2|8808|interleukin 1 receptor-like 2##U49065|IL1RL2|8808|interleukin 1 receptor-like 2##BC107064|IL1RL2|8808|interleukin 1 receptor-like 2	0.032207	
chr2	119981500	119981566	reg1034817.p1	3.513	+	TSC_hg19_v1_chr2_+_119981409 AF423424 AK001691 AY029585 AY214461 BX538047 AK291608 AF238864 AF262322 AY082673 BC095421 BC042150	-106	+	AL833624 NM_001008410 NM_018234 NM_182915 TSC_hg19_v1_chr2_+_119981388	-148	+	TSC_hg19_v1_chr2_-_119916341 AF525315 BC043189 BC067896 BC142965 NM_182528	-65129	-	BC126395 BC126397 BC144012 BC144014 BC171737 NM_001017927 TSC_hg19_v1_chr2_-_120124372 BC047365 BC105805	142805	-	NM_001079862 TSC_hg19_v1_chr2_+_120124552 FM213122 FM213123 FM213124 FM213125 FM213126 FM213128 NM_001178041 NM_001178042 NM_001178043 NM_020548	142996	+	TSC_hg19_v1_chr2_+_120124566 M15887 BC006466	143051	+	AF423424|STEAP3|55240|STEAP family member 3, metalloreductase##AK001691|STEAP3|55240|STEAP family member 3, metalloreductase##AY029585|STEAP3|55240|STEAP family member 3, metalloreductase##AY214461|STEAP3|55240|STEAP family member 3, metalloreductase##BX538047|STEAP3|55240|STEAP family member 3, metalloreductase##AK291608|STEAP3|55240|STEAP family member 3, metalloreductase##AF238864|STEAP3|55240|STEAP family member 3, metalloreductase##AF262322|STEAP3|55240|STEAP family member 3, metalloreductase##AY082673|STEAP3|55240|STEAP family member 3, metalloreductase##BC095421|STEAP3|55240|STEAP family member 3, metalloreductase##BC042150|STEAP3|55240|STEAP family member 3, metalloreductase##AL833624|STEAP3|55240|STEAP family member 3, metalloreductase##NM_001008410|STEAP3|55240|STEAP family member 3, metalloreductase##NM_018234|STEAP3|55240|STEAP family member 3, metalloreductase##NM_182915|STEAP3|55240|STEAP family member 3, metalloreductase##AF525315|C1QL2|165257|complement component 1, q subcomponent-like 2##BC043189|C1QL2|165257|complement component 1, q subcomponent-like 2##BC067896|C1QL2|165257|complement component 1, q subcomponent-like 2##BC142965|C1QL2|165257|complement component 1, q subcomponent-like 2##NM_182528|C1QL2|165257|complement component 1, q subcomponent-like 2##BC126395|C2orf76|130355|chromosome 2 open reading frame 76##BC126397|C2orf76|130355|chromosome 2 open reading frame 76##BC144012|C2orf76|130355|chromosome 2 open reading frame 76##BC144014|C2orf76|130355|chromosome 2 open reading frame 76##BC171737|C2orf76|130355|chromosome 2 open reading frame 76##NM_001017927|C2orf76|130355|chromosome 2 open reading frame 76##BC047365|C2orf76|130355|chromosome 2 open reading frame 76##BC105805|C2orf76|130355|chromosome 2 open reading frame 76##NM_001079862|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213122|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213123|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213124|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213125|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213126|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##FM213128|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178041|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178042|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_001178043|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##NM_020548|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##M15887|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)##BC006466|DBI|1622|diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)	0.0	
chr2	225448986	225449086	reg1037169.p2	3.513	+	U58089 TSC_hg19_v1_chr2_-_225378353	-70700	-	AF052147 BC031844 TSC_hg19_v1_chr2_-_225370764	-78308	-	BC025754 NM_001122779 NM_024785 AK026399	-182306	-	AK299644 AK291151 AF064087 AF062537 TSC_hg19_v1_chr2_-_225449842	747	-	TSC_hg19_v1_chr2_-_225450043 AB014517 BC092409	1005	-	TSC_hg19_v1_chr2_-_225450056 BC039598	1039	-	U58089|CUL3|8452|cullin 3##AF052147|CUL3|8452|cullin 3##BC031844|CUL3|8452|cullin 3##BC025754|FAM124B|79843|family with sequence similarity 124B##NM_001122779|FAM124B|79843|family with sequence similarity 124B##NM_024785|FAM124B|79843|family with sequence similarity 124B##AK026399|FAM124B|79843|family with sequence similarity 124B##AK299644|CUL3|8452|cullin 3##AK291151|CUL3|8452|cullin 3##AF064087|CUL3|8452|cullin 3##AF062537|CUL3|8452|cullin 3##AB014517|CUL3|8452|cullin 3##BC092409|CUL3|8452|cullin 3##BC039598|CUL3|8452|cullin 3	0.0	
chr22	46934626	46934782	reg1037354.p1	3.513	+	AF231024 NM_014246 TSC_hg19_v1_chr22_-_46933142	-1590	-	TSC_hg19_v1_chr22_+_46731810 AK303020	-202894	+	TSC_hg19_v1_chr22_+_46731615 AB178028 AK001002 AK295173 AK290712 BC066593 BC080631 CR456445 BC027991 BC012076 AB463324 CU013043 CU013331	-203075	+	CR456470 NM_015124 BC129837 AB463563 CU013020 CU013308	87972	+	AB462977 CU012949 CU013237 CR456404 BC126940 BC067255 TSC_hg19_v1_chr22_-_47134112 AK291476 AJ457828	199375	-	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	199451	-	AF231024|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##NM_014246|CELSR1|9620|cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)##AK303020|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AB178028|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK001002|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK295173|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##AK290712|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC066593|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC080631|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456445|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC027991|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##BC012076|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013043|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CU013331|TRMU|55687|tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase##CR456470|GRAMD4|23151|GRAM domain containing 4##NM_015124|GRAMD4|23151|GRAM domain containing 4##BC129837|GRAMD4|23151|GRAM domain containing 4##CU012949|CERK|64781|ceramide kinase##CU013237|CERK|64781|ceramide kinase##CR456404|CERK|64781|ceramide kinase##BC126940|CERK|64781|ceramide kinase##BC067255|CERK|64781|ceramide kinase##AK291476|CERK|64781|ceramide kinase##AJ457828|CERK|64781|ceramide kinase##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase	0.013102	
chr3	56807494	56807617	reg1038198.p2	3.513	+	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-90348	-	BC029354 NM_015224	-109482	-	AK125303 TSC_hg19_v1_chr3_+_56591241 AL833326 AL832692 AK095688	-216309	+	AK293864 AB209661 NM_001128616	2114	-	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	28356	-	AY221117 NM_181727 BC126274 BC136498	286948	+	BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##BC029354|FAM208A|23272|family with sequence similarity 208, member A##NM_015224|FAM208A|23272|family with sequence similarity 208, member A##AK125303|CCDC66|285331|coiled-coil domain containing 66##AL833326|CCDC66|285331|coiled-coil domain containing 66##AL832692|CCDC66|285331|coiled-coil domain containing 66##AK095688|CCDC66|285331|coiled-coil domain containing 66##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12	0.0	
chr5	170031373	170031553	reg1014221.p2	3.513	+	TSC_hg19_v1_chr5_+_169931023 BC035032 NM_001034837 NM_014592	-100428	+	BC025707 NM_004137 AK313979	-214816	-	TSC_hg19_v1_chr5_+_169816493 AK311026	-214967	+	AK055205 AK296805 NM_014211 AK292901 AK300303 U95367 BC109105 BC109106	179291	+	TSC_hg19_v1_chr5_+_170288885 AK298785 NM_022897 AK315159	257468	+	TSC_hg19_v1_chr5_+_170289029 AJ271459 AJ288952 AJ288953 AJ288954 AJ288955 BC030953 AF222747 AB527205 AL832980	257559	+	BC035032|KCNIP1|30820|Kv channel interacting protein 1##NM_001034837|KCNIP1|30820|Kv channel interacting protein 1##NM_014592|KCNIP1|30820|Kv channel interacting protein 1##BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK055205|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK296805|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##NM_014211|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK292901|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK300303|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##U95367|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109105|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##BC109106|GABRP|2568|gamma-aminobutyric acid (GABA) A receptor, pi##AK298785|RANBP17|64901|RAN binding protein 17##NM_022897|RANBP17|64901|RAN binding protein 17##AK315159|RANBP17|64901|RAN binding protein 17##AJ271459|RANBP17|64901|RAN binding protein 17##AJ288952|RANBP17|64901|RAN binding protein 17##AJ288953|RANBP17|64901|RAN binding protein 17##AJ288954|RANBP17|64901|RAN binding protein 17##AJ288955|RANBP17|64901|RAN binding protein 17##BC030953|RANBP17|64901|RAN binding protein 17##AF222747|RANBP17|64901|RAN binding protein 17##AL832980|RANBP17|64901|RAN binding protein 17	0.0	
chr6	138725216	138725333	reg1031559.p1	3.513	+	BC069109 NM_021635 AF189269 AF189270	-185648	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	-242138	+	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	-296706	-	TSC_hg19_v1_chr6_+_138725355 NM_014320 AF117616 BC016806 BC016807 AK057928 AY427823	111	+	BC010290 TSC_hg19_v1_chr6_+_138725477 BC008205 BC093037 AF411610	271	+	AK307584 NM_001144060 TSC_hg19_v1_chr6_-_138820579	95304	-	BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##NM_014320|HEBP2|23593|heme binding protein 2##AF117616|HEBP2|23593|heme binding protein 2##BC016806|HEBP2|23593|heme binding protein 2##BC016807|HEBP2|23593|heme binding protein 2##AK057928|HEBP2|23593|heme binding protein 2##AY427823|HEBP2|23593|heme binding protein 2##BC010290|HEBP2|23593|heme binding protein 2##BC008205|HEBP2|23593|heme binding protein 2##BC093037|HEBP2|23593|heme binding protein 2##AF411610|HEBP2|23593|heme binding protein 2##AK307584|NHSL1|57224|NHS-like 1##NM_001144060|NHSL1|57224|NHS-like 1	0.403637	CTCF.p2:-16:0.404
chr7	45001862	45001939	reg1042199.p2	3.513	+	AB464680 TSC_hg19_v1_chr7_-_44924953 AY039216 NM_033224 BC101735 BC101737	-76931	-	TSC_hg19_v1_chr7_-_44887698 NM_012412 NM_138635 NM_201436 NM_201516 NM_201517	-114174	-	TSC_hg19_v1_chr7_-_44887667 AK023973	-114231	-	AB463131 TSC_hg19_v1_chr7_-_45018615 AK074050	16687	-	BC113544 BC117241 TSC_hg19_v1_chr7_-_45018675 AB290179 AL832302	16762	-	BC063854 TSC_hg19_v1_chr7_-_45018705 AK097912 NM_033054	16797	-	AY039216|PURB|5814|purine-rich element binding protein B##NM_033224|PURB|5814|purine-rich element binding protein B##BC101735|PURB|5814|purine-rich element binding protein B##BC101737|PURB|5814|purine-rich element binding protein B##NM_012412|H2AFV|94239|H2A histone family, member V##NM_138635|H2AFV|94239|H2A histone family, member V##NM_201436|H2AFV|94239|H2A histone family, member V##NM_201516|H2AFV|94239|H2A histone family, member V##NM_201517|H2AFV|94239|H2A histone family, member V##AK023973|H2AFV|94239|H2A histone family, member V##AK074050|MYO1G|64005|myosin IG##BC113544|MYO1G|64005|myosin IG##BC117241|MYO1G|64005|myosin IG##AB290179|MYO1G|64005|myosin IG##AL832302|MYO1G|64005|myosin IG##BC063854|MYO1G|64005|myosin IG##AK097912|MYO1G|64005|myosin IG##NM_033054|MYO1G|64005|myosin IG	0.021496	
chr8	11388463	11388560	reg1041677.p1	3.513	+	S76617 NM_001715 BC018703 BC004473 BC038555	-36918	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-64282	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-183507	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	173209	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	238757	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	271673	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.0	
chr8	123860048	123860114	reg1035537.p2	3.513	+	TSC_hg19_v1_chr8_+_123794108 AB020661	-65978	+	BC042145 TSC_hg19_v1_chr8_+_123794000	-66087	+	TSC_hg19_v1_chr8_+_123793897 NM_014943	-66170	+	TSC_hg19_v1_chr8_+_123963651 EU446694 AB083653	103618	+	BC002457 TSC_hg19_v1_chr8_-_124054522	194426	-	AY358818 TSC_hg19_v1_chr8_-_124054540 AK303826	194459	-	AB020661|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##NM_014943|ZHX2|22882|zinc fingers and homeoboxes 2##EU446694|ZHX2|22882|zinc fingers and homeoboxes 2##AB083653|ZHX2|22882|zinc fingers and homeoboxes 2##BC002457|DERL1|79139|Der1-like domain family, member 1##AY358818|DERL1|79139|Der1-like domain family, member 1##AK303826|DERL1|79139|Der1-like domain family, member 1	0.151235	
chr10	80304283	80304463	reg1032438.p1	3.512	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-510742	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-510817	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-515059	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	524415	+	TSC_hg19_v1_chr10_+_80899458 AK025812	595111	+	TSC_hg19_v1_chr10_+_81003207 AB033050	698757	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.0	
chr15	31528439	31528619	reg1034931.p2	3.512	+	NM_001243538	-5480	-	GQ502181 HM135791 NM_001252020	-75101	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-134612	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	90809	+	AJ430383 NM_130901	419012	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	634300	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.0	
chr17	3875911	3875978	reg1034758.p2	3.512	+	AB462957 DQ893317 EU176809 Z69881 TSC_hg19_v1_chr17_-_3867744 AF068220 BC035729 AK292716 NM_005173 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958	-8243	-	NM_002558	-55985	-	X83688 U45448 BC044657 BC027949 TSC_hg19_v1_chr17_-_3819762 AK310981 AK313264 AF020498	-56196	-	AB384472 TSC_hg19_v1_chr17_-_4046240	170271	-	TSC_hg19_v1_chr17_-_4046246 AB007859 BC151836 NM_015113	170308	-	TSC_hg19_v1_chr17_-_4046308 AK127482	170366	-	DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_002558|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##X83688|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##U45448|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC044657|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC027949|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AK313264|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AF020498|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	0.0	
chr20	48402491	48402603	reg1038447.p2	3.512	+	TSC_hg19_v1_chr20_-_48330471 NM_004776	-72081	-	AB004550 TSC_hg19_v1_chr20_-_48330359	-72191	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	-72317	-	NM_015266 TSC_hg19_v1_chr20_+_48429364 AK300318	26761	+	CR749638 TSC_hg19_v1_chr20_+_48429436 AB023156 BC112213 AK295803 AK308328 AK131001 AK295665 AK310530 AK295822	26871	+	AK289644 NM_001135773	127728	-	NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_015266|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK300318|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##CR749638|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AB023156|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##BC112213|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295803|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK308328|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK131001|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295665|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK310530|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295822|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK289644|SPATA2|9825|spermatogenesis associated 2##NM_001135773|SPATA2|9825|spermatogenesis associated 2	0.0	
chr2	136983821	136983971	reg1033660.p2	3.512	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-108220	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-110098	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-240680	-	TSC_hg19_v1_chr2_+_137523114 AK299929	539220	+	NM_001080427	764565	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1738038	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.0	
chr21	44086292	44086367	reg1039263.p2	3.512	+	TSC_hg19_v1_chr21_+_44073730 NM_001001567 NM_001001568 NM_001001569 NM_001001570 NM_001001571 NM_001001572 NM_001001573 NM_001001574 NM_001001575 NM_001001576 NM_001001577 NM_001001578 NM_001001579 NM_001001580 NM_001001581 NM_001001582 NM_001001583 NM_001001584 NM_001001585 NM_002606 AF048837 AY701187 BC009047 AK314679 AY196299 AY196300 AY196301 AY196302 AY196303 AY196304 AY196305 AY196306 AY196307 AY196308 AY196309 AY196310 AY196311 AY196312 AY196313 AY196314 AK001307 AK294112 AF067223 AF067224 AF067225 AF067226 AB527758 AY242121 BT007016 GQ129331 GQ129332	-12542	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	-152326	+	AJ269529 NM_018964	-166588	+	AB590172 CU675357 DQ892967 DQ896215 TSC_hg19_v1_chr21_-_44299643 AK292923 AK315008 AJ243912 AJ243913 BC006341	213295	-	TSC_hg19_v1_chr21_-_44299690 BC001074 NM_018669 NM_033661 AK298015	213355	-	TSC_hg19_v1_chr21_+_44313422 NM_001001503 NM_021075 BC054016 BC021217 AK308228 AK289586 BC033766 CU676876 CU689730 CR542174 CR542190	227072	+	NM_001001567|PDE9A|5152|phosphodiesterase 9A##NM_001001568|PDE9A|5152|phosphodiesterase 9A##NM_001001569|PDE9A|5152|phosphodiesterase 9A##NM_001001570|PDE9A|5152|phosphodiesterase 9A##NM_001001571|PDE9A|5152|phosphodiesterase 9A##NM_001001572|PDE9A|5152|phosphodiesterase 9A##NM_001001573|PDE9A|5152|phosphodiesterase 9A##NM_001001574|PDE9A|5152|phosphodiesterase 9A##NM_001001575|PDE9A|5152|phosphodiesterase 9A##NM_001001576|PDE9A|5152|phosphodiesterase 9A##NM_001001577|PDE9A|5152|phosphodiesterase 9A##NM_001001578|PDE9A|5152|phosphodiesterase 9A##NM_001001579|PDE9A|5152|phosphodiesterase 9A##NM_001001580|PDE9A|5152|phosphodiesterase 9A##NM_001001581|PDE9A|5152|phosphodiesterase 9A##NM_001001582|PDE9A|5152|phosphodiesterase 9A##NM_001001583|PDE9A|5152|phosphodiesterase 9A##NM_001001584|PDE9A|5152|phosphodiesterase 9A##NM_001001585|PDE9A|5152|phosphodiesterase 9A##NM_002606|PDE9A|5152|phosphodiesterase 9A##AF048837|PDE9A|5152|phosphodiesterase 9A##AY701187|PDE9A|5152|phosphodiesterase 9A##BC009047|PDE9A|5152|phosphodiesterase 9A##AK314679|PDE9A|5152|phosphodiesterase 9A##AY196299|PDE9A|5152|phosphodiesterase 9A##AY196300|PDE9A|5152|phosphodiesterase 9A##AY196301|PDE9A|5152|phosphodiesterase 9A##AY196302|PDE9A|5152|phosphodiesterase 9A##AY196303|PDE9A|5152|phosphodiesterase 9A##AY196304|PDE9A|5152|phosphodiesterase 9A##AY196305|PDE9A|5152|phosphodiesterase 9A##AY196306|PDE9A|5152|phosphodiesterase 9A##AY196307|PDE9A|5152|phosphodiesterase 9A##AY196308|PDE9A|5152|phosphodiesterase 9A##AY196309|PDE9A|5152|phosphodiesterase 9A##AY196310|PDE9A|5152|phosphodiesterase 9A##AY196311|PDE9A|5152|phosphodiesterase 9A##AY196312|PDE9A|5152|phosphodiesterase 9A##AY196313|PDE9A|5152|phosphodiesterase 9A##AY196314|PDE9A|5152|phosphodiesterase 9A##AK001307|PDE9A|5152|phosphodiesterase 9A##AK294112|PDE9A|5152|phosphodiesterase 9A##AF067223|PDE9A|5152|phosphodiesterase 9A##AF067224|PDE9A|5152|phosphodiesterase 9A##AF067225|PDE9A|5152|phosphodiesterase 9A##AF067226|PDE9A|5152|phosphodiesterase 9A##AY242121|PDE9A|5152|phosphodiesterase 9A##BT007016|PDE9A|5152|phosphodiesterase 9A##GQ129331|PDE9A|5152|phosphodiesterase 9A##GQ129332|PDE9A|5152|phosphodiesterase 9A##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##DQ892967|WDR4|10785|WD repeat domain 4##DQ896215|WDR4|10785|WD repeat domain 4##AK292923|WDR4|10785|WD repeat domain 4##AK315008|WDR4|10785|WD repeat domain 4##AJ243912|WDR4|10785|WD repeat domain 4##AJ243913|WDR4|10785|WD repeat domain 4##BC006341|WDR4|10785|WD repeat domain 4##BC001074|WDR4|10785|WD repeat domain 4##NM_018669|WDR4|10785|WD repeat domain 4##NM_033661|WDR4|10785|WD repeat domain 4##AK298015|WDR4|10785|WD repeat domain 4##NM_001001503|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##NM_021075|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC054016|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC021217|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK308228|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK289586|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC033766|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542174|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542190|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa	0.0	
chr22	32516152	32516219	reg1042447.p2	3.512	+	TSC_hg19_v1_chr22_+_32439250 M24847 BC139838 BC139839 CU013176 CU013464 AB463272	-76927	+	TSC_hg19_v1_chr22_+_32439229 CR456579	-76962	+	TSC_hg19_v1_chr22_+_32439103 AK312948	-77072	+	BC139845 CU012997 CU013285 AB527618 CR456485 NM_001010859 BC040263	39069	-	BC069827 BC069737 AJ010231 NM_006605	73240	-	CR456563 NM_001159546	82331	-	M24847|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139838|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139839|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CU013176|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CU013464|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CR456579|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##AK312948|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139845|C22orf42|150297|chromosome 22 open reading frame 42##CR456485|C22orf42|150297|chromosome 22 open reading frame 42##NM_001010859|C22orf42|150297|chromosome 22 open reading frame 42##BC040263|C22orf42|150297|chromosome 22 open reading frame 42##BC069827|RFPL2|10739|ret finger protein-like 2##BC069737|RFPL2|10739|ret finger protein-like 2##AJ010231|RFPL2|10739|ret finger protein-like 2##NM_006605|RFPL2|10739|ret finger protein-like 2##CR456563|RFPL2|10739|ret finger protein-like 2##NM_001159546|RFPL2|10739|ret finger protein-like 2	0.0	
chr2	37898652	37898719	reg1044961.p2	3.512	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-326872	+	BC030706 BC012820 AB015982 NM_005813	-354492	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-439839	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	94	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	704	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	253747	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.0	
chr2	56516476	56516578	reg1046721.p1	3.512	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-103618	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-104761	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-105322	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	1757227	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	1757461	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	1951955	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.0	
chr3	134697690	134697800	reg1041227.p1	3.512	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-183444	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-183594	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-327900	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	986786	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	986875	+	NM_181897 AK316258 L12146	1043873	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.036059	
chr4	59642323	59642399	reg1030079.p2	3.512	+	AK303915 AK316082 BC066339 NM_001253835 NM_001553 TSC_hg19_v1_chr4_-_57976552	-1665793	-	BT006654 L19182 BC017201 S75725 TSC_hg19_v1_chr4_-_57976548	-1665829	-	TSC_hg19_v1_chr4_-_57976376 AF540057	-1665962	-	TSC_hg19_v1_chr4_+_62066948 AK309793	2424614	+	NM_015236	2720477	+	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	5632735	-	AK303915|IGFBP7|3490|insulin-like growth factor binding protein 7##AK316082|IGFBP7|3490|insulin-like growth factor binding protein 7##BC066339|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001253835|IGFBP7|3490|insulin-like growth factor binding protein 7##NM_001553|IGFBP7|3490|insulin-like growth factor binding protein 7##BT006654|IGFBP7|3490|insulin-like growth factor binding protein 7##L19182|IGFBP7|3490|insulin-like growth factor binding protein 7##BC017201|IGFBP7|3490|insulin-like growth factor binding protein 7##S75725|IGFBP7|3490|insulin-like growth factor binding protein 7##AF540057|IGFBP7|3490|insulin-like growth factor binding protein 7##AK309793|LPHN3|23284|latrophilin 3##NM_015236|LPHN3|23284|latrophilin 3##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like	0.0	
chr5	133407144	133407270	reg1038360.p1	3.512	+	AK095989 NM_003374	-66384	-	TSC_hg19_v1_chr5_-_133340431 L06132	-66777	-	TSC_hg19_v1_chr5_-_133340397 BC071168 AK293639	-66806	-	TSC_hg19_v1_chr5_+_133450435 BC048769 NM_003202 BC072023 EU446661 AL832816	43312	+	NM_001134851 NM_201632 NM_201634 NM_213648 X59869 X59870 X59871 AK057580 AK093530	44154	+	BC009839 U33760 BC025673 TSC_hg19_v1_chr5_-_133512639 BC065730	105416	-	AK095989|VDAC1|7416|voltage-dependent anion channel 1##NM_003374|VDAC1|7416|voltage-dependent anion channel 1##L06132|VDAC1|7416|voltage-dependent anion channel 1##BC071168|VDAC1|7416|voltage-dependent anion channel 1##AK293639|VDAC1|7416|voltage-dependent anion channel 1##BC048769|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_003202|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC072023|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##EU446661|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AL832816|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_001134851|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201632|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_201634|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##NM_213648|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59869|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59870|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##X59871|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK057580|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##AK093530|TCF7|6932|transcription factor 7 (T-cell specific, HMG-box)##BC009839|SKP1|6500|S-phase kinase-associated protein 1##U33760|SKP1|6500|S-phase kinase-associated protein 1##BC025673|SKP1|6500|S-phase kinase-associated protein 1##BC065730|SKP1|6500|S-phase kinase-associated protein 1	0.0	
chr5	61064675	61064775	reg1042589.p1	3.512	+	AK094862 NM_173667	-131090	+	TSC_hg19_v1_chr5_+_60628085 NM_020928	-436627	+	TSC_hg19_v1_chr5_-_60458296 BC103711 BX648459 BC066550 BX538015 AK291180 NM_001048249	-606458	-	TSC_hg19_v1_chr5_+_61601970 NM_001098511 NM_001243952 NM_001243953 NM_004520	537248	+	TSC_hg19_v1_chr5_+_61602066 BC047544	537357	+	TSC_hg19_v1_chr5_+_61602278 AK297347 AK307880 EF560716 EF560728 EU832810 GQ129246 AK315866	537545	+	AK094862|C5orf64|285668|chromosome 5 open reading frame 64##NM_173667|C5orf64|285668|chromosome 5 open reading frame 64##NM_020928|ZSWIM6|57688|zinc finger, SWIM-type containing 6##BC103711|C5orf43|643155|chromosome 5 open reading frame 43##BX648459|C5orf43|643155|chromosome 5 open reading frame 43##BC066550|C5orf43|643155|chromosome 5 open reading frame 43##BX538015|C5orf43|643155|chromosome 5 open reading frame 43##AK291180|C5orf43|643155|chromosome 5 open reading frame 43##NM_001048249|C5orf43|643155|chromosome 5 open reading frame 43##NM_001098511|KIF2A|3796|kinesin heavy chain member 2A##NM_001243952|KIF2A|3796|kinesin heavy chain member 2A##NM_001243953|KIF2A|3796|kinesin heavy chain member 2A##NM_004520|KIF2A|3796|kinesin heavy chain member 2A##BC047544|KIF2A|3796|kinesin heavy chain member 2A##AK297347|KIF2A|3796|kinesin heavy chain member 2A##AK307880|KIF2A|3796|kinesin heavy chain member 2A##EF560716|KIF2A|3796|kinesin heavy chain member 2A##EF560728|KIF2A|3796|kinesin heavy chain member 2A##EU832810|KIF2A|3796|kinesin heavy chain member 2A##GQ129246|KIF2A|3796|kinesin heavy chain member 2A##AK315866|KIF2A|3796|kinesin heavy chain member 2A	0.0	
chr6	2875656	2875732	reg1039523.p2	3.512	+	TSC_hg19_v1_chr6_-_2842202 AK304641 AK309765	-33497	-	TSC_hg19_v1_chr6_-_2842095 BC009015 NM_030666 M93056 AK298044 AK312973 AK223370 AK291327	-33612	-	TSC_hg19_v1_chr6_-_2840686 BT006928 AB590702	-34942	-	TSC_hg19_v1_chr6_-_2903544 BC002538 AB060690 L40378 AK314842 NM_004155	27814	-	AK098566 TSC_hg19_v1_chr6_-_2971511	95720	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	96117	-	AK304641|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK309765|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BT006928|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC002538|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AB060690|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##L40378|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK314842|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##NM_004155|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK098566|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6	0.0	
chr7	50306596	50306671	reg1039087.p1	3.512	+	NM_001161834	-170952	+	BT006822 DQ890629 DQ893797 TSC_hg19_v1_chr7_-_50132817 BC005223 D17570 AK312799 NM_001159878 NM_007009	-173809	-	TSC_hg19_v1_chr7_+_49813233 AY358393 NM_198570 BC110857	-493363	+	TSC_hg19_v1_chr7_+_50344311 BC064594 AY377974 NM_001220765 NM_001220766 NM_001220767 NM_001220768 NM_001220769 NM_001220770 NM_001220771 NM_001220772 NM_001220773 NM_001220774 NM_001220775 NM_001220776 NM_006060 U40462	37720	+	TSC_hg19_v1_chr7_+_50348343 AK303586 AK308411 BC018349 AF180297	41686	+	BC051867 TSC_hg19_v1_chr7_-_50518046 AK308136 AK023142 AK027537 NM_001042762 NM_022116	211421	-	NM_001161834|C7orf72|100130988|chromosome 7 open reading frame 72##BT006822|ZPBP|11055|zona pellucida binding protein##DQ890629|ZPBP|11055|zona pellucida binding protein##DQ893797|ZPBP|11055|zona pellucida binding protein##BC005223|ZPBP|11055|zona pellucida binding protein##D17570|ZPBP|11055|zona pellucida binding protein##AK312799|ZPBP|11055|zona pellucida binding protein##NM_001159878|ZPBP|11055|zona pellucida binding protein##NM_007009|ZPBP|11055|zona pellucida binding protein##AY358393|VWC2|375567|von Willebrand factor C domain containing 2##NM_198570|VWC2|375567|von Willebrand factor C domain containing 2##BC110857|VWC2|375567|von Willebrand factor C domain containing 2##BC064594|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AY377974|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220765|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220766|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220767|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220768|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220769|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220770|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220771|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220772|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220773|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220774|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220775|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_001220776|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##NM_006060|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##U40462|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK303586|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##AK308411|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC018349|IKZF1|10320|IKAROS family zinc finger 1 (Ikaros)##BC051867|FIGNL1|63979|fidgetin-like 1##AK308136|FIGNL1|63979|fidgetin-like 1##AK023142|FIGNL1|63979|fidgetin-like 1##AK027537|FIGNL1|63979|fidgetin-like 1##NM_001042762|FIGNL1|63979|fidgetin-like 1##NM_022116|FIGNL1|63979|fidgetin-like 1	0.0	
chr8	100289558	100289647	reg1045540.p1	3.512	+	TSC_hg19_v1_chr8_+_100025537 BC094749	-264012	+	AJ608772 AJ608773 TSC_hg19_v1_chr8_+_100025501	-264090	+	AY223814 AY223815 AY223816 AY223817 AY223818 NM_015243 NM_017890 NM_152564 NM_181661 TSC_hg19_v1_chr8_+_100025498	-264107	+	TSC_hg19_v1_chr8_-_100905892 X13238	616277	-	TSC_hg19_v1_chr8_-_100905910 AK311791	616319	-	NM_004374	616639	-	BC094749|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608772|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AJ608773|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223814|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223815|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223816|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223817|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##AY223818|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_015243|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_017890|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_152564|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##NM_181661|VPS13B|157680|vacuolar protein sorting 13 homolog B (yeast)##X13238|COX6C|1345|cytochrome c oxidase subunit VIc##AK311791|COX6C|1345|cytochrome c oxidase subunit VIc##NM_004374|COX6C|1345|cytochrome c oxidase subunit VIc	0.0	
chr10	13394350	13394422	reg1021446.p1	3.511	+	TSC_hg19_v1_chr10_-_13390214 U34044 BC063816 GU954545 GU954546 GU954547 GU954548 GU954549 NM_001195602 NM_001195604 NM_012247	-4119	-	TSC_hg19_v1_chr10_-_13390036 AK301568 AK309829	-4347	-	TSC_hg19_v1_chr10_-_13342064 AF023462 BC029512 AF112977 BC021011 NM_006214	-52290	-	BC031618 AK097602 NM_001100912 NM_152751	150573	-	NM_003675 TSC_hg19_v1_chr10_+_13628948	234557	+	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	234601	+	U34044|SEPHS1|22929|selenophosphate synthetase 1##BC063816|SEPHS1|22929|selenophosphate synthetase 1##GU954545|SEPHS1|22929|selenophosphate synthetase 1##GU954546|SEPHS1|22929|selenophosphate synthetase 1##GU954547|SEPHS1|22929|selenophosphate synthetase 1##GU954548|SEPHS1|22929|selenophosphate synthetase 1##GU954549|SEPHS1|22929|selenophosphate synthetase 1##NM_001195602|SEPHS1|22929|selenophosphate synthetase 1##NM_001195604|SEPHS1|22929|selenophosphate synthetase 1##NM_012247|SEPHS1|22929|selenophosphate synthetase 1##AK301568|SEPHS1|22929|selenophosphate synthetase 1##AK309829|SEPHS1|22929|selenophosphate synthetase 1##AF023462|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC029512|PHYH|5264|phytanoyl-CoA 2-hydroxylase##AF112977|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC021011|PHYH|5264|phytanoyl-CoA 2-hydroxylase##NM_006214|PHYH|5264|phytanoyl-CoA 2-hydroxylase##BC031618|BEND7|222389|BEN domain containing 7##AK097602|BEND7|222389|BEN domain containing 7##NM_001100912|BEND7|222389|BEN domain containing 7##NM_152751|BEND7|222389|BEN domain containing 7##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)	0.0	
chr10	60808254	60808361	reg1046788.p1	3.511	+	TSC_hg19_v1_chr10_+_60272869 NM_001080512 AY726586	-535395	+	BC029815 TSC_hg19_v1_chr10_+_60145169 AK312558 M62810 NM_003201 BC018628 BC104482 BC126366 EU279428 HQ258758 AB451241 AB451366 AB464302 BT019658 BT019659 CR407653	-663102	+	TSC_hg19_v1_chr10_+_60094765 NM_001204880 NM_003338 AK291901 BC005980 BC015997 AF257220 AJ272367 X78140 AB590170 DQ893111 DQ896385 BT007041	-713471	+	TSC_hg19_v1_chr10_-_60936189 AK055418	127899	-	AL834339 NM_032439 TSC_hg19_v1_chr10_+_60936408 CR749429	128081	+	BC011268 AK054956 TSC_hg19_v1_chr10_+_60936573 AB384640 AM392743	128253	+	NM_001080512|BICC1|80114|bicaudal C homolog 1 (Drosophila)##AY726586|BICC1|80114|bicaudal C homolog 1 (Drosophila)##BC029815|TFAM|7019|transcription factor A, mitochondrial##AK312558|TFAM|7019|transcription factor A, mitochondrial##M62810|TFAM|7019|transcription factor A, mitochondrial##NM_003201|TFAM|7019|transcription factor A, mitochondrial##BC018628|TFAM|7019|transcription factor A, mitochondrial##BC104482|TFAM|7019|transcription factor A, mitochondrial##BC126366|TFAM|7019|transcription factor A, mitochondrial##EU279428|TFAM|7019|transcription factor A, mitochondrial##HQ258758|TFAM|7019|transcription factor A, mitochondrial##AB451241|TFAM|7019|transcription factor A, mitochondrial##AB451366|TFAM|7019|transcription factor A, mitochondrial##BT019658|TFAM|7019|transcription factor A, mitochondrial##BT019659|TFAM|7019|transcription factor A, mitochondrial##CR407653|TFAM|7019|transcription factor A, mitochondrial##NM_001204880|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##NM_003338|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AK291901|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC005980|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BC015997|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AF257220|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AJ272367|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##X78140|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ893111|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##DQ896385|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##BT007041|UBE2D1|7321|ubiquitin-conjugating enzyme E2D 1##AL834339|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##NM_032439|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##CR749429|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##BC011268|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AK054956|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like##AM392743|PHYHIPL|84457|phytanoyl-CoA 2-hydroxylase interacting protein-like	0.0	
chr11	37123260	37123353	reg1028734.p2	3.511	+	AK292664 BC022397 NM_000536 NM_001243785 NM_001243786	-503504	-	TSC_hg19_v1_chr11_+_36616072 AK290833 DQ121386 AK095997 AK299642 BC009561 BC051031 NM_138787 AK302634	-507202	+	NM_000448 M29474	-533738	+	AY358293 TSC_hg19_v1_chr11_-_40314659 BC041374	3191288	-	AB046800 NM_020929	3192357	-	TSC_hg19_v1_chr11_+_43333523 NM_001142930 NM_001142931 NM_001243747 NM_006595	6210212	+	AK292664|RAG2|5897|recombination activating gene 2##BC022397|RAG2|5897|recombination activating gene 2##NM_000536|RAG2|5897|recombination activating gene 2##NM_001243785|RAG2|5897|recombination activating gene 2##NM_001243786|RAG2|5897|recombination activating gene 2##AK290833|C11orf74|119710|chromosome 11 open reading frame 74##DQ121386|C11orf74|119710|chromosome 11 open reading frame 74##AK095997|C11orf74|119710|chromosome 11 open reading frame 74##AK299642|C11orf74|119710|chromosome 11 open reading frame 74##BC009561|C11orf74|119710|chromosome 11 open reading frame 74##BC051031|C11orf74|119710|chromosome 11 open reading frame 74##NM_138787|C11orf74|119710|chromosome 11 open reading frame 74##AK302634|C11orf74|119710|chromosome 11 open reading frame 74##NM_000448|RAG1|5896|recombination activating gene 1##M29474|RAG1|5896|recombination activating gene 1##AY358293|LRRC4C|57689|leucine rich repeat containing 4C##BC041374|LRRC4C|57689|leucine rich repeat containing 4C##AB046800|LRRC4C|57689|leucine rich repeat containing 4C##NM_020929|LRRC4C|57689|leucine rich repeat containing 4C##NM_001142930|API5|8539|apoptosis inhibitor 5##NM_001142931|API5|8539|apoptosis inhibitor 5##NM_001243747|API5|8539|apoptosis inhibitor 5##NM_006595|API5|8539|apoptosis inhibitor 5	0.0	
chr1	198787170	198787237	reg1043960.p1	3.511	+	TSC_hg19_v1_chr1_+_198608244 BC121086 BC121087 BC127656 BC127657 BC148257 AY567999 AB527417 AY429565 AY429566	-178873	+	TSC_hg19_v1_chr1_+_198608224 AK307635 AK130573 AK292131 AK299986 AK303539 BC017863 Y00638 BC014239 BC031525	-178978	+	NM_002838 NM_080921 NM_080923 AK308217 TSC_hg19_v1_chr1_+_198608169 AK310898	-179030	+	TSC_hg19_v1_chr1_-_198906559 EF413001	119344	-	U93553 AF146343 NM_003822 NM_205860 BC027893 AB019246 BC118571 BC118652 U80251 AB590580 AF124247 HQ692857 AF124248	1209666	+	AK316513 TSC_hg19_v1_chr1_+_200011716	1224521	+	BC121086|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC121087|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127656|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC127657|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC148257|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY567999|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AY429565|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK307635|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK130573|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK292131|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK299986|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK303539|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC017863|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##Y00638|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC014239|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##BC031525|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_002838|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080921|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##NM_080923|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK308217|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##AK310898|PTPRC|5788|protein tyrosine phosphatase, receptor type, C##EF413001|LOC100131234|100131234|familial acute myelogenous leukemia related factor##U93553|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF146343|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_003822|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##NM_205860|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC027893|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AB019246|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118571|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##BC118652|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##U80251|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AF124247|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##HQ692857|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2##AK316513|NR5A2|2494|nuclear receptor subfamily 5, group A, member 2	0.0	
chr13	78271862	78272042	reg1038288.p2	3.511	+	TSC_hg19_v1_chr13_+_78271822 NM_001242868	-48	+	NM_001160706 NM_003843 NM_144777 BC020726 AF045941 AK025320 AK222720 AK301659	-162101	+	NM_015057 TSC_hg19_v1_chr13_-_77901230	-370749	-	AK294201 NM_001040153	1063	+	NM_001242869 NM_001242870 NM_001242871 NM_144595 AL834203 AK289600 BC045177 AK289714 AK295423	43454	+	TSC_hg19_v1_chr13_-_78492936 L06623 X99250 S44866 BC014472 AB209198 AK290699 NM_001122659 NM_003991	221000	-	NM_001242868|SLAIN1|122060|SLAIN motif family, member 1##NM_001160706|SCEL|8796|sciellin##NM_003843|SCEL|8796|sciellin##NM_144777|SCEL|8796|sciellin##BC020726|SCEL|8796|sciellin##AF045941|SCEL|8796|sciellin##AK025320|SCEL|8796|sciellin##AK222720|SCEL|8796|sciellin##AK301659|SCEL|8796|sciellin##NM_015057|MYCBP2|23077|MYC binding protein 2##AK294201|SLAIN1|122060|SLAIN motif family, member 1##NM_001040153|SLAIN1|122060|SLAIN motif family, member 1##NM_001242869|SLAIN1|122060|SLAIN motif family, member 1##NM_001242870|SLAIN1|122060|SLAIN motif family, member 1##NM_001242871|SLAIN1|122060|SLAIN motif family, member 1##NM_144595|SLAIN1|122060|SLAIN motif family, member 1##AL834203|SLAIN1|122060|SLAIN motif family, member 1##AK289600|SLAIN1|122060|SLAIN motif family, member 1##BC045177|SLAIN1|122060|SLAIN motif family, member 1##AK289714|SLAIN1|122060|SLAIN motif family, member 1##AK295423|SLAIN1|122060|SLAIN motif family, member 1##L06623|EDNRB|1910|endothelin receptor type B##X99250|EDNRB|1910|endothelin receptor type B##S44866|EDNRB|1910|endothelin receptor type B##BC014472|EDNRB|1910|endothelin receptor type B##AB209198|EDNRB|1910|endothelin receptor type B##AK290699|EDNRB|1910|endothelin receptor type B##NM_001122659|EDNRB|1910|endothelin receptor type B##NM_003991|EDNRB|1910|endothelin receptor type B	0.0	
chr20	1455661	1455755	reg1034067.p1	3.511	+	AK093845 NM_001206736 NM_016143 NM_018839	-7372	-	TSC_hg19_v1_chr20_-_1447590 BC002801	-8101	-	TSC_hg19_v1_chr20_-_1447490 AB590363 CU678204 DQ893189 DQ896513 AK001511 AF078856 AF086909 AF112211 AK223334 AK297403 AK315433 AF283774 AK223341	-8231	-	AY424277 AK095499 AK294440 TSC_hg19_v1_chr20_-_1472067	16327	-	AK297072 TSC_hg19_v1_chr20_-_1472142	16426	-	AK097113 TSC_hg19_v1_chr20_-_1472172 NM_001122962 NM_001134836	16492	-	AK093845|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_001206736|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_016143|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##NM_018839|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##BC002801|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##DQ893189|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##DQ896513|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK001511|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF078856|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF086909|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF112211|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223334|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK297403|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK315433|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AF283774|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AK223341|NSFL1C|55968|NSFL1 (p97) cofactor (p47)##AY424277|SIRPB2|284759|signal-regulatory protein beta 2##AK095499|SIRPB2|284759|signal-regulatory protein beta 2##AK294440|SIRPB2|284759|signal-regulatory protein beta 2##AK297072|SIRPB2|284759|signal-regulatory protein beta 2##NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2##NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2	0.966438	CTCF.p2:-2:0.966
chr22	21983652	21983780	reg1025225.p1	3.511	+	TSC_hg19_v1_chr22_+_21922030 AB528270 CU013202 CU013490 X92962	-61673	+	TSC_hg19_v1_chr22_+_21922021 AK311761 AK291083 AK293179	-61694	+	TSC_hg19_v1_chr22_+_21922018 AJ000519 AK125396 S81003	-61700	+	TSC_hg19_v1_chr22_-_21984304 BC064568 BC053663 BC017281 BC110075 BC110799 BC057814 NM_001017964 BC096754	599	-	TSC_hg19_v1_chr22_-_21984367 BC133043 BC133047	684	-	TSC_hg19_v1_chr22_+_21987057 AK302030 AK093365 AX748079 BC033499 NM_152612	3310	+	CU013202|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##CU013490|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##X92962|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK311761|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK291083|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK293179|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AJ000519|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##AK125396|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##S81003|UBE2L3|7332|ubiquitin-conjugating enzyme E2L 3##BC064568|YDJC|150223|YdjC homolog (bacterial)##BC053663|YDJC|150223|YdjC homolog (bacterial)##BC017281|YDJC|150223|YdjC homolog (bacterial)##BC110075|YDJC|150223|YdjC homolog (bacterial)##BC110799|YDJC|150223|YdjC homolog (bacterial)##BC057814|YDJC|150223|YdjC homolog (bacterial)##NM_001017964|YDJC|150223|YdjC homolog (bacterial)##BC096754|YDJC|150223|YdjC homolog (bacterial)##BC133043|YDJC|150223|YdjC homolog (bacterial)##BC133047|YDJC|150223|YdjC homolog (bacterial)##AK302030|CCDC116|164592|coiled-coil domain containing 116##AK093365|CCDC116|164592|coiled-coil domain containing 116##BC033499|CCDC116|164592|coiled-coil domain containing 116##NM_152612|CCDC116|164592|coiled-coil domain containing 116	0.0	
chr2	44075348	44075469	reg1034228.p1	3.511	+	AF324494 NM_022437 BC113657 BC143564 HQ258492 AF320294	-9261	+	BC111541 BC111542 AF320293 AF312715 NM_022436 AK091997 AX747300	-9463	-	AK223432 NM_001193464 NM_015522 NM_016008 AK074206 AK301489 BC016324 TSC_hg19_v1_chr2_+_44001199 BC040558 BC058823 AF151818 AY083346 BC006969	-74210	+	TSC_hg19_v1_chr2_-_44223096 BC050311	147659	-	AK299869 TSC_hg19_v1_chr2_-_44223114 AK125781 AK290016 AK308348	147705	-	BC026034 TSC_hg19_v1_chr2_-_44223116	147710	-	AF324494|ABCG8|64241|ATP-binding cassette, sub-family G (WHITE), member 8##NM_022437|ABCG8|64241|ATP-binding cassette, sub-family G (WHITE), member 8##BC113657|ABCG8|64241|ATP-binding cassette, sub-family G (WHITE), member 8##BC143564|ABCG8|64241|ATP-binding cassette, sub-family G (WHITE), member 8##HQ258492|ABCG8|64241|ATP-binding cassette, sub-family G (WHITE), member 8##AF320294|ABCG8|64241|ATP-binding cassette, sub-family G (WHITE), member 8##BC111541|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5##BC111542|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5##AF320293|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5##AF312715|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5##NM_022436|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5##AK091997|ABCG5|64240|ATP-binding cassette, sub-family G (WHITE), member 5##AK223432|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##NM_001193464|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##NM_015522|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##NM_016008|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##AK074206|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##AK301489|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##BC016324|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##BC040558|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##BC058823|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##AF151818|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##AY083346|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##BC006969|DYNC2LI1|51626|dynein, cytoplasmic 2, light intermediate chain 1##BC050311|LRPPRC|10128|leucine-rich PPR-motif containing##AK299869|LRPPRC|10128|leucine-rich PPR-motif containing##AK125781|LRPPRC|10128|leucine-rich PPR-motif containing##AK290016|LRPPRC|10128|leucine-rich PPR-motif containing##AK308348|LRPPRC|10128|leucine-rich PPR-motif containing##BC026034|LRPPRC|10128|leucine-rich PPR-motif containing	0.0	
chr2	75652418	75652580	reg1036797.p1	3.511	+	AK289765 NM_001058 NM_015727	-225871	-	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	-466714	+	TSC_hg19_v1_chr2_-_75062285 BC013295	-590248	-	BC016157 TSC_hg19_v1_chr2_-_75788066	135548	-	TSC_hg19_v1_chr2_-_75788091 NM_001135032	135591	-	AK023453 NM_032181	144348	-	AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC016157|FAM176A|84141|family with sequence similarity 176, member A##NM_001135032|FAM176A|84141|family with sequence similarity 176, member A##AK023453|FAM176A|84141|family with sequence similarity 176, member A##NM_032181|FAM176A|84141|family with sequence similarity 176, member A	0.678484	CTCF.p2:42:0.678
chr2	8822174	8822291	reg1032693.p1	3.511	+	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-29	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1764645	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1804369	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	155487	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	321589	-	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	524660	+	NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	0.045174	
chr3	126150092	126150194	reg1032007.p1	3.511	+	AK097402 NM_182628 TSC_hg19_v1_chr3_+_126113866	-36320	+	TSC_hg19_v1_chr3_-_126076252 NM_014079 BC036733	-73928	-	AF052732 BC027241 AK222535 AK222694 TSC_hg19_v1_chr3_-_125899430 AK294392 AK294530 AB209299 NM_012190	-250700	-	TSC_hg19_v1_chr3_-_126194735 AY936556	44582	-	DQ079590 NM_001040653 NM_025112 TSC_hg19_v1_chr3_-_126194793	44646	-	AK055862 BC115405 BC115406 TSC_hg19_v1_chr3_-_126236597 AB075869 NM_001165974 NM_144639	86462	-	AK097402|CCDC37|348807|coiled-coil domain containing 37##NM_182628|CCDC37|348807|coiled-coil domain containing 37##NM_014079|KLF15|28999|Kruppel-like factor 15##BC036733|KLF15|28999|Kruppel-like factor 15##AF052732|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##BC027241|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222535|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK222694|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294392|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AK294530|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AB209299|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##NM_012190|ALDH1L1|10840|aldehyde dehydrogenase 1 family, member L1##AY936556|ZXDC|79364|ZXD family zinc finger C##DQ079590|ZXDC|79364|ZXD family zinc finger C##NM_001040653|ZXDC|79364|ZXD family zinc finger C##NM_025112|ZXDC|79364|ZXD family zinc finger C##AK055862|UROC1|131669|urocanase domain containing 1##BC115405|UROC1|131669|urocanase domain containing 1##BC115406|UROC1|131669|urocanase domain containing 1##AB075869|UROC1|131669|urocanase domain containing 1##NM_001165974|UROC1|131669|urocanase domain containing 1##NM_144639|UROC1|131669|urocanase domain containing 1	0.022504	
chr4	38398280	38398348	reg1040118.p2	3.511	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-419297	+	AF095288 BC069114 BC069400 NM_006607	-436259	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-505525	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	267512	+	AF289565 TSC_hg19_v1_chr4_-_38666549	268175	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	386285	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr5	129370656	129370722	reg1039288.p2	3.511	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	-130202	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-574636	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-940264	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	1130242	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	1130301	-	TSC_hg19_v1_chr5_-_130501019 NM_005340	1130354	-	BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1##NM_005340|HINT1|3094|histidine triad nucleotide binding protein 1	0.0	
chr6_ssto_hap7	4540386	4540475	reg1037446.p1	3.511	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.913401	CTCF.p2:13:0.913
chr7	118558767	118558873	reg1041335.p1	3.511	+	NM_019644 AK302407	-694086	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-734649	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-1045277	-	AK307139 AB028967 NM_012281	1354884	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	1939200	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	1939340	-	NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12	0.977264	CTCF.p2:-9:0.977
chr7	99817592	99817699	reg1043804.p2	3.511	+	NM_024070	-775	+	TSC_hg19_v1_chr7_+_99775540 NM_012447 AK292394 BC146806 AK302693 BC047490 BC028684 AL833816 BC140932	-42082	+	AJ007798 TSC_hg19_v1_chr7_+_99775380	-42281	+	BC065200 AK290510 TSC_hg19_v1_chr7_-_99869856 BC044886 BC090867 BC033723 BC053367 NM_178831	52185	-	BC056606 NM_001004351	87679	+	AB103084 TSC_hg19_v1_chr7_-_99933502 BC038996 D38435 D38499 BC110395 BC044214 BC067809	115896	-	NM_024070|PVRIG|79037|poliovirus receptor related immunoglobulin domain containing##NM_012447|STAG3|10734|stromal antigen 3##AK292394|STAG3|10734|stromal antigen 3##BC146806|STAG3|10734|stromal antigen 3##AK302693|STAG3|10734|stromal antigen 3##BC047490|STAG3|10734|stromal antigen 3##BC028684|STAG3|10734|stromal antigen 3##AL833816|STAG3|10734|stromal antigen 3##BC140932|STAG3|10734|stromal antigen 3##AJ007798|STAG3|10734|stromal antigen 3##BC065200|GATS|352954|GATS, stromal antigen 3 opposite strand##AK290510|GATS|352954|GATS, stromal antigen 3 opposite strand##BC044886|GATS|352954|GATS, stromal antigen 3 opposite strand##BC090867|GATS|352954|GATS, stromal antigen 3 opposite strand##BC033723|GATS|352954|GATS, stromal antigen 3 opposite strand##BC053367|GATS|352954|GATS, stromal antigen 3 opposite strand##NM_178831|GATS|352954|GATS, stromal antigen 3 opposite strand##BC056606|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)##NM_001004351|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)##BC038996|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38435|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38499|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC110395|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC044214|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC067809|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1	0.0	
chr8	144466296	144466397	reg1009554.p2	3.511	+	TSC_hg19_v1_chr8_+_144451016 NM_052924 BC012135 BC025767 AB528055 AY082588 CU693058 AB067516	-15256	+	AF349017 NM_052963 TSC_hg19_v1_chr8_-_144417051	-49291	-	TSC_hg19_v1_chr8_-_144417034 AK303237 AK315913 AK308475 AK311647 BC071914 BC044646 BC052285	-49331	-	NM_201589	46255	-	D63484 TSC_hg19_v1_chr8_-_144623602 BC038670	157245	-	TSC_hg19_v1_chr8_-_144623640 NM_015117	157286	-	NM_052924|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC012135|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##BC025767|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AY082588|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AB067516|RHPN1|114822|rhophilin, Rho GTPase binding protein 1##AF349017|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_052963|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK303237|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK315913|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK308475|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##AK311647|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC071914|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC044646|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##BC052285|TOP1MT|116447|topoisomerase (DNA) I, mitochondrial##NM_201589|MAFA|389692|v-maf musculoaponeurotic fibrosarcoma oncogene homolog A (avian)##D63484|ZC3H3|23144|zinc finger CCCH-type containing 3##BC038670|ZC3H3|23144|zinc finger CCCH-type containing 3##NM_015117|ZC3H3|23144|zinc finger CCCH-type containing 3	0.0	
chr10	14051783	14051853	reg1042210.p1	3.510	+	TSC_hg19_v1_chr10_-_14050453 AK001072	-1326	-	TSC_hg19_v1_chr10_-_13749648 AK057828	-302129	-	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-422831	+	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	321032	-	TSC_hg19_v1_chr10_-_14646259 BC064407	594499	-	TSC_hg19_v1_chr10_-_14646423 BC072452	594611	-	AK001072|FRMD4A|55691|FERM domain containing 4A##AK057828|FRMD4A|55691|FERM domain containing 4A##AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B	0.0	
chr12	122019107	122019207	reg1032108.p2	3.510	+	BC115379 BC115380 TSC_hg19_v1_chr12_-_122018879 AJ459424 BX648928 NM_032590	-243	-	TSC_hg19_v1_chr12_-_122018152 AK127328 NM_001005366	-898	-	TSC_hg19_v1_chr12_-_121905104 BC028612 AK299827 AK316470	-114083	-	TSC_hg19_v1_chr12_+_122064448 BC075831 NM_032790 BC013386 BC015369 BC104633 AK027372 CU677285	45486	+	BC057760 NM_173855	88402	-	TSC_hg19_v1_chr12_+_122150657 AK126568 NM_001080825 BC127768 BC127769 BC035884	131587	+	BC115379|KDM2B|84678|lysine (K)-specific demethylase 2B##BC115380|KDM2B|84678|lysine (K)-specific demethylase 2B##AJ459424|KDM2B|84678|lysine (K)-specific demethylase 2B##BX648928|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_032590|KDM2B|84678|lysine (K)-specific demethylase 2B##AK127328|KDM2B|84678|lysine (K)-specific demethylase 2B##NM_001005366|KDM2B|84678|lysine (K)-specific demethylase 2B##BC028612|KDM2B|84678|lysine (K)-specific demethylase 2B##AK299827|KDM2B|84678|lysine (K)-specific demethylase 2B##AK316470|KDM2B|84678|lysine (K)-specific demethylase 2B##BC075831|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##NM_032790|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC013386|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC015369|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC104633|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##AK027372|ORAI1|84876|ORAI calcium release-activated calcium modulator 1##BC057760|MORN3|283385|MORN repeat containing 3##NM_173855|MORN3|283385|MORN repeat containing 3##AK126568|TMEM120B|144404|transmembrane protein 120B##NM_001080825|TMEM120B|144404|transmembrane protein 120B##BC127768|TMEM120B|144404|transmembrane protein 120B##BC127769|TMEM120B|144404|transmembrane protein 120B##BC035884|TMEM120B|144404|transmembrane protein 120B	0.0	
chr12	131812386	131812473	reg1041021.p2	3.510	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-373976	+	TSC_hg19_v1_chr12_+_131356640 BC072000 BC014901 BC004272 BC016654	-455718	+	AK300934 TSC_hg19_v1_chr12_+_131356617 BC014518 AL357616 BC051908	-455804	+	TSC_hg19_v1_chr12_+_132195623 BC142980	383184	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	383227	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	500537	+	BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC072000|RAN|5901|RAN, member RAS oncogene family##BC014901|RAN|5901|RAN, member RAS oncogene family##BC004272|RAN|5901|RAN, member RAS oncogene family##BC016654|RAN|5901|RAN, member RAS oncogene family##AK300934|RAN|5901|RAN, member RAS oncogene family##BC014518|RAN|5901|RAN, member RAS oncogene family##AL357616|RAN|5901|RAN, member RAS oncogene family##BC051908|RAN|5901|RAN, member RAS oncogene family##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)	0.129167	
chr17	7212252	7212389	reg1039854.p2	3.510	+	NM_001143762 AF376057 AY129322	-613	+	TSC_hg19_v1_chr17_+_7211302 NM_001143761 AY129321	-1016	+	TSC_hg19_v1_chr17_+_7210946 BC000751 BC001832 BC107779 BC030160 BC080196 AK292615 AK222585 BC085015	-1326	+	BT006998 CR541723 CR541750 TSC_hg19_v1_chr17_-_7218639 BC014192 BC013652 NM_004489	6197	-	TSC_hg19_v1_chr17_-_7218697 AK301877 U28963 BC107738 BC103901 BC103902 BC103903	6453	-	TSC_hg19_v1_chr17_-_7232655 AL136870 AB058690 NM_001005408 NM_032442 AL833570	20367	-	NM_001143762|EIF5A|1984|eukaryotic translation initiation factor 5A##AF376057|EIF5A|1984|eukaryotic translation initiation factor 5A##AY129322|EIF5A|1984|eukaryotic translation initiation factor 5A##NM_001143761|EIF5A|1984|eukaryotic translation initiation factor 5A##AY129321|EIF5A|1984|eukaryotic translation initiation factor 5A##BC000751|EIF5A|1984|eukaryotic translation initiation factor 5A##BC001832|EIF5A|1984|eukaryotic translation initiation factor 5A##BC107779|EIF5A|1984|eukaryotic translation initiation factor 5A##BC030160|EIF5A|1984|eukaryotic translation initiation factor 5A##BC080196|EIF5A|1984|eukaryotic translation initiation factor 5A##AK292615|EIF5A|1984|eukaryotic translation initiation factor 5A##AK222585|EIF5A|1984|eukaryotic translation initiation factor 5A##BC085015|EIF5A|1984|eukaryotic translation initiation factor 5A##BT006998|GPS2|2874|G protein pathway suppressor 2##CR541723|GPS2|2874|G protein pathway suppressor 2##CR541750|GPS2|2874|G protein pathway suppressor 2##BC014192|GPS2|2874|G protein pathway suppressor 2##BC013652|GPS2|2874|G protein pathway suppressor 2##NM_004489|GPS2|2874|G protein pathway suppressor 2##AK301877|GPS2|2874|G protein pathway suppressor 2##U28963|GPS2|2874|G protein pathway suppressor 2##BC107738|GPS2|2874|G protein pathway suppressor 2##BC103901|GPS2|2874|G protein pathway suppressor 2##BC103902|GPS2|2874|G protein pathway suppressor 2##BC103903|GPS2|2874|G protein pathway suppressor 2##AL136870|NEURL4|84461|neuralized homolog 4 (Drosophila)##AB058690|NEURL4|84461|neuralized homolog 4 (Drosophila)##NM_001005408|NEURL4|84461|neuralized homolog 4 (Drosophila)##NM_032442|NEURL4|84461|neuralized homolog 4 (Drosophila)##AL833570|NEURL4|84461|neuralized homolog 4 (Drosophila)	0.0	
chr19	59056827	59056953	reg1033711.p1	3.510	+	U78773 TSC_hg19_v1_chr19_+_59056118 AK313478 AB385179	-820	+	TSC_hg19_v1_chr19_+_59055881 U95040	-1002	+	TSC_hg19_v1_chr19_+_59055826 AK225760 BC004978 NM_005762 BC052986	-1058	+	TSC_hg19_v1_chr19_-_59066342 BC002502	9435	-	TSC_hg19_v1_chr19_-_59066353 NM_198426	9463	-	TSC_hg19_v1_chr19_-_59066373 AK092868 AK311974 AX747778	9524	-	U78773|TRIM28|10155|tripartite motif containing 28##AK313478|TRIM28|10155|tripartite motif containing 28##U95040|TRIM28|10155|tripartite motif containing 28##AK225760|TRIM28|10155|tripartite motif containing 28##BC004978|TRIM28|10155|tripartite motif containing 28##NM_005762|TRIM28|10155|tripartite motif containing 28##BC052986|TRIM28|10155|tripartite motif containing 28##BC002502|CHMP2A|27243|charged multivesicular body protein 2A##NM_198426|CHMP2A|27243|charged multivesicular body protein 2A##AK092868|CHMP2A|27243|charged multivesicular body protein 2A##AK311974|CHMP2A|27243|charged multivesicular body protein 2A	0.0	
chr22	41843110	41843290	reg1018355.p2	3.510	+	TSC_hg19_v1_chr22_-_41842881 NM_016272	-261	-	TSC_hg19_v1_chr22_-_41842785 BC028919 AB051450 BC038957	-418	-	TSC_hg19_v1_chr22_-_41842432 CR456594	-745	-	AB489147 CU012956 CU013244 EU446678 TSC_hg19_v1_chr22_-_41864681 BC075808 CR456398 BC007321 NM_032758	21484	-	TSC_hg19_v1_chr22_+_41865120 AK293562 AK297213 AK301321 AK314845 AK302691 AK296260 BC026196 BC014092 NM_001098 U80040 CR456365 AB385022 CR536568 CU012932 CU013220 DQ893674 DQ895836	21931	+	TSC_hg19_v1_chr22_-_41940381 AB051452 BC088367 BC017248	97153	-	NM_016272|TOB2|10766|transducer of ERBB2, 2##BC028919|TOB2|10766|transducer of ERBB2, 2##AB051450|TOB2|10766|transducer of ERBB2, 2##BC038957|TOB2|10766|transducer of ERBB2, 2##CR456594|TOB2|10766|transducer of ERBB2, 2##CU012956|PHF5A|84844|PHD finger protein 5A##CU013244|PHF5A|84844|PHD finger protein 5A##EU446678|PHF5A|84844|PHD finger protein 5A##BC075808|PHF5A|84844|PHD finger protein 5A##CR456398|PHF5A|84844|PHD finger protein 5A##BC007321|PHF5A|84844|PHD finger protein 5A##NM_032758|PHF5A|84844|PHD finger protein 5A##AK293562|ACO2|50|aconitase 2, mitochondrial##AK297213|ACO2|50|aconitase 2, mitochondrial##AK301321|ACO2|50|aconitase 2, mitochondrial##AK314845|ACO2|50|aconitase 2, mitochondrial##AK302691|ACO2|50|aconitase 2, mitochondrial##AK296260|ACO2|50|aconitase 2, mitochondrial##BC026196|ACO2|50|aconitase 2, mitochondrial##BC014092|ACO2|50|aconitase 2, mitochondrial##NM_001098|ACO2|50|aconitase 2, mitochondrial##U80040|ACO2|50|aconitase 2, mitochondrial##CR456365|ACO2|50|aconitase 2, mitochondrial##CR536568|ACO2|50|aconitase 2, mitochondrial##CU012932|ACO2|50|aconitase 2, mitochondrial##CU013220|ACO2|50|aconitase 2, mitochondrial##DQ893674|ACO2|50|aconitase 2, mitochondrial##DQ895836|ACO2|50|aconitase 2, mitochondrial##AB051452|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC088367|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)##BC017248|POLR3H|171568|polymerase (RNA) III (DNA directed) polypeptide H (22.9kD)	0.0	
chr3	126701033	126701099	reg1015415.p1	3.510	+	TSC_hg19_v1_chr3_+_126423084 AK311056 AK310910 BC006123 NM_032343	-277989	+	TSC_hg19_v1_chr3_-_126373968 NM_001173513 NM_052883	-327090	-	TSC_hg19_v1_chr3_-_126373947 AK299502 BC030028 BC050032	-327152	-	AB385178 NM_032242 X87832	6374	+	AK097460 BC137154 BC137155 TSC_hg19_v1_chr3_+_126912016	210928	+	AB037108 NM_016372	598213	-	AK311056|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##AK310910|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##BC006123|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_032343|CHCHD6|84303|coiled-coil-helix-coiled-coil-helix domain containing 6##NM_001173513|TXNRD3|114112|thioredoxin reductase 3##NM_052883|TXNRD3|114112|thioredoxin reductase 3##AK299502|TXNRD3|114112|thioredoxin reductase 3##BC030028|TXNRD3|114112|thioredoxin reductase 3##BC050032|TXNRD3|114112|thioredoxin reductase 3##NM_032242|PLXNA1|5361|plexin A1##X87832|PLXNA1|5361|plexin A1##AK097460|C3orf56|285311|chromosome 3 open reading frame 56##BC137154|C3orf56|285311|chromosome 3 open reading frame 56##BC137155|C3orf56|285311|chromosome 3 open reading frame 56##AB037108|TPRA1|131601|transmembrane protein, adipocyte asscociated 1##NM_016372|TPRA1|131601|transmembrane protein, adipocyte asscociated 1	0.0	
chr3	5848020	5848161	reg1044598.p1	3.510	+	TSC_hg19_v1_chr3_+_5229490 AB383802 DQ892678 DQ895921 AK292643	-618599	+	TSC_hg19_v1_chr3_+_5229430 D86967	-618657	+	BC019088 NM_014674 TSC_hg19_v1_chr3_+_5229369	-618727	+	TSC_hg19_v1_chr3_+_6902801 AK312488 NM_000844 NM_181874	1054709	+	TSC_hg19_v1_chr3_+_6902816 X94552 BC136458 BC136459	1054808	+	TSC_hg19_v1_chr3_-_8543333 AK124088 BC020876	2695240	-	DQ892678|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##DQ895921|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK292643|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##D86967|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##BC019088|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##NM_014674|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1##AK312488|GRM7|2917|glutamate receptor, metabotropic 7##NM_000844|GRM7|2917|glutamate receptor, metabotropic 7##NM_181874|GRM7|2917|glutamate receptor, metabotropic 7##X94552|GRM7|2917|glutamate receptor, metabotropic 7##BC136458|GRM7|2917|glutamate receptor, metabotropic 7##BC136459|GRM7|2917|glutamate receptor, metabotropic 7##AK124088|LOC100288428|100288428|uncharacterized LOC100288428	0.948775	CTCF.p2:-12:0.949
chr4	7773326	7773426	reg1038289.p1	3.510	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	-336720	-	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-578981	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-703575	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	168012	-	TSC_hg19_v1_chr4_-_8073714 AK094798	300340	-	TSC_hg19_v1_chr4_-_8129388 AK301060	356009	-	BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2	0.0	
chr9	134548753	134548933	reg1042734.p1	3.510	+	AK057848 TSC_hg19_v1_chr9_-_134406625 BC091495 BC015547 AK022317 NM_001135954 NM_031432	-142193	-	TSC_hg19_v1_chr9_-_134406578 AF254133 CR457281 CU677347 AF237290 AF125106 AK295471 AK307475	-142296	-	AK315218 TSC_hg19_v1_chr9_+_134378402 AK293529 BC022877	-170408	+	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	36359	-	D21239 NM_005312	64081	-	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	66447	-	AK057848|UCK1|83549|uridine-cytidine kinase 1##BC091495|UCK1|83549|uridine-cytidine kinase 1##BC015547|UCK1|83549|uridine-cytidine kinase 1##AK022317|UCK1|83549|uridine-cytidine kinase 1##NM_001135954|UCK1|83549|uridine-cytidine kinase 1##NM_031432|UCK1|83549|uridine-cytidine kinase 1##AF254133|UCK1|83549|uridine-cytidine kinase 1##CR457281|UCK1|83549|uridine-cytidine kinase 1##AF237290|UCK1|83549|uridine-cytidine kinase 1##AF125106|UCK1|83549|uridine-cytidine kinase 1##AK295471|UCK1|83549|uridine-cytidine kinase 1##AK307475|UCK1|83549|uridine-cytidine kinase 1##AK315218|POMT1|10585|protein-O-mannosyltransferase 1##AK293529|POMT1|10585|protein-O-mannosyltransferase 1##BC022877|POMT1|10585|protein-O-mannosyltransferase 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1	0.0	
chr12	10766221	10766401	reg1033062.p1	3.509	+	AB528590 TSC_hg19_v1_chr12_-_10766200 BC010905 AK022720 AK001154 BC000928 AK096106 AF165518 NM_018048	-142	-	BC012550 NM_213657 NM_213658 AK310992	-159063	-	X54867 X54868 AF461812 NM_002259 NM_007328	-160358	-	AF251059 NM_018423	60579	-	TSC_hg19_v1_chr12_-_10875782 AB463536 DQ892686 DQ895930	109431	-	TSC_hg19_v1_chr12_-_10875923 X95325 BC015913 BC015564 BC021926 BC009744 M24069 BC008801 X72712 AK314846 NM_001145426 NM_003651	109590	-	BC010905|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK022720|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK001154|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AK096106|MAGOHB|55110|mago-nashi homolog B (Drosophila)##AF165518|MAGOHB|55110|mago-nashi homolog B (Drosophila)##NM_018048|MAGOHB|55110|mago-nashi homolog B (Drosophila)##BC012550|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_213657|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_213658|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##AK310992|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##X54867|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##X54868|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##AF461812|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_002259|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##NM_007328|KLRC1|3821|killer cell lectin-like receptor subfamily C, member 1##AF251059|STYK1|55359|serine/threonine/tyrosine kinase 1##NM_018423|STYK1|55359|serine/threonine/tyrosine kinase 1##DQ892686|CSDA|8531|cold shock domain protein A##DQ895930|CSDA|8531|cold shock domain protein A##X95325|CSDA|8531|cold shock domain protein A##BC015913|CSDA|8531|cold shock domain protein A##BC015564|CSDA|8531|cold shock domain protein A##BC021926|CSDA|8531|cold shock domain protein A##BC009744|CSDA|8531|cold shock domain protein A##M24069|CSDA|8531|cold shock domain protein A##BC008801|CSDA|8531|cold shock domain protein A##X72712|CSDA|8531|cold shock domain protein A##AK314846|CSDA|8531|cold shock domain protein A##NM_001145426|CSDA|8531|cold shock domain protein A##NM_003651|CSDA|8531|cold shock domain protein A	0.0	
chr1	233530918	233531098	reg1006841.p2	3.509	+	AJ311797 AJ311798 NM_032435 BC136648 BC136649	-67425	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	-99525	-	TSC_hg19_v1_chr1_+_233086381 AF416713	-444619	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	218815	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	218911	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	509604	+	AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3	0.0	
chr13	95217466	95217646	reg1039220.p1	3.509	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	-85730	-	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	-1338129	+	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	-3166652	+	TSC_hg19_v1_chr13_-_95248407 AY544125 AF048686 AK313251 BC033675	30873	-	AJ006068 TSC_hg19_v1_chr13_-_95248497 AK303439 BC005284 NM_014305	30940	-	TSC_hg19_v1_chr13_+_95254110 NM_180989 BC033906 BC052243 AK126794	36546	+	AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##AY544125|TGDS|23483|TDP-glucose 4,6-dehydratase##AF048686|TGDS|23483|TDP-glucose 4,6-dehydratase##AK313251|TGDS|23483|TDP-glucose 4,6-dehydratase##BC033675|TGDS|23483|TDP-glucose 4,6-dehydratase##AJ006068|TGDS|23483|TDP-glucose 4,6-dehydratase##AK303439|TGDS|23483|TDP-glucose 4,6-dehydratase##BC005284|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_014305|TGDS|23483|TDP-glucose 4,6-dehydratase##NM_180989|GPR180|160897|G protein-coupled receptor 180##BC033906|GPR180|160897|G protein-coupled receptor 180##BC052243|GPR180|160897|G protein-coupled receptor 180##AK126794|GPR180|160897|G protein-coupled receptor 180	0.0	
chr14	93582275	93582367	reg1034177.p1	3.509	+	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	-107	-	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	-730	-	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-192724	+	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	68879	-	TSC_hg19_v1_chr14_-_93651243 NM_022151	68924	-	AK315522 TSC_hg19_v1_chr14_-_93651261	68947	-	BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1##NM_022151|MOAP1|64112|modulator of apoptosis 1##AK315522|MOAP1|64112|modulator of apoptosis 1	1.036913	CTCF.p2:-34:0.999
chr16	30093983	30094122	reg1040143.p2	3.509	+	TSC_hg19_v1_chr16_+_30087347 X70218 BC001416 AF097996 NM_002720	-6684	+	TSC_hg19_v1_chr16_+_30077158 BC012880 BC015888 AK301993	-16889	+	TSC_hg19_v1_chr16_+_30077141 X05236 AK026577	-16920	+	BC026031 NM_004608 AK022330 TSC_hg19_v1_chr16_-_30103243	9195	-	BC005009 TSC_hg19_v1_chr16_-_30107535 BC050664 NM_031477 AB098737 NM_001145524 AF305622 AK022409	13493	-	TSC_hg19_v1_chr16_+_30107748 AK095480 BC048809	13716	+	X70218|PPP4C|5531|protein phosphatase 4, catalytic subunit##BC001416|PPP4C|5531|protein phosphatase 4, catalytic subunit##AF097996|PPP4C|5531|protein phosphatase 4, catalytic subunit##NM_002720|PPP4C|5531|protein phosphatase 4, catalytic subunit##BC012880|ALDOA|226|aldolase A, fructose-bisphosphate##BC015888|ALDOA|226|aldolase A, fructose-bisphosphate##AK301993|ALDOA|226|aldolase A, fructose-bisphosphate##X05236|ALDOA|226|aldolase A, fructose-bisphosphate##AK026577|ALDOA|226|aldolase A, fructose-bisphosphate##BC026031|TBX6|6911|T-box 6##NM_004608|TBX6|6911|T-box 6##AK022330|TBX6|6911|T-box 6##BC005009|YPEL3|83719|yippee-like 3 (Drosophila)##BC050664|YPEL3|83719|yippee-like 3 (Drosophila)##NM_031477|YPEL3|83719|yippee-like 3 (Drosophila)##AB098737|YPEL3|83719|yippee-like 3 (Drosophila)##NM_001145524|YPEL3|83719|yippee-like 3 (Drosophila)##AF305622|YPEL3|83719|yippee-like 3 (Drosophila)##AK022409|YPEL3|83719|yippee-like 3 (Drosophila)	0.0	
chr17	18217405	18217537	reg1038231.p1	3.509	+	TSC_hg19_v1_chr17_-_18177717 AF086042	-39725	-	AF467443 BC014973 NM_148886	-53048	+	TSC_hg19_v1_chr17_+_18163948 NM_001144900 NM_139162 AK056165 AK128310	-53566	+	TSC_hg19_v1_chr17_-_18218287 AK292926 AK296437 U43431 BC051748 AK311668 NM_004618	801	-	TSC_hg19_v1_chr17_+_18218603 NM_144775	1115	+	TSC_hg19_v1_chr17_+_18218606 AK296847	1135	+	AF086042|TOP3A|7156|topoisomerase (DNA) III alpha##AF467443|SMCR7|125170|Smith-Magenis syndrome chromosome region, candidate 7##BC014973|SMCR7|125170|Smith-Magenis syndrome chromosome region, candidate 7##NM_148886|SMCR7|125170|Smith-Magenis syndrome chromosome region, candidate 7##NM_001144900|SMCR7|125170|Smith-Magenis syndrome chromosome region, candidate 7##NM_139162|SMCR7|125170|Smith-Magenis syndrome chromosome region, candidate 7##AK056165|SMCR7|125170|Smith-Magenis syndrome chromosome region, candidate 7##AK128310|SMCR7|125170|Smith-Magenis syndrome chromosome region, candidate 7##AK292926|TOP3A|7156|topoisomerase (DNA) III alpha##AK296437|TOP3A|7156|topoisomerase (DNA) III alpha##U43431|TOP3A|7156|topoisomerase (DNA) III alpha##BC051748|TOP3A|7156|topoisomerase (DNA) III alpha##AK311668|TOP3A|7156|topoisomerase (DNA) III alpha##NM_004618|TOP3A|7156|topoisomerase (DNA) III alpha##NM_144775|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##AK296847|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8	0.0	
chr18	34092098	34092165	reg1043776.p2	3.509	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	-214417	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-324655	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-382243	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	316632	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	316763	-	AB073382 TSC_hg19_v1_chr18_-_34408948	316821	-	AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.0	
chr2	111612082	111612171	reg1026643.p1	3.509	+	AK300513 NM_001142807 BC022268	-121947	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-176304	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-176483	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	266361	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	1029500	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	1029635	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.10221	
chr2	202123248	202123385	reg1031373.p2	3.509	+	NM_001080125 AF422926 BC068050 AF422925 AF422929 X98172 AY429525	-519	+	NM_001080124 NM_001228 NM_033355 NM_033358 AF422927 AF422928 BC010390 AK310630 BC017031 U60520 X98176	-25091	+	TSC_hg19_v1_chr2_+_202047863 AK310746 U86214 AK304859 AK225475 AY690601 BC042844 U60519 AJ487678 AJ487679	-75456	+	NM_033356 X98173	1940	+	AK124115 BC031603 NM_001127391 NM_139163 AK292283	98777	-	TSC_hg19_v1_chr2_-_202316179 AK314384 AK054763	192831	-	NM_001080125|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422926|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC068050|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422929|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98172|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001080124|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_001228|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033355|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##NM_033358|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422927|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AF422928|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC010390|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310630|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##BC017031|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##U60520|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98176|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK310746|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U86214|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK304859|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AK225475|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AY690601|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##BC042844|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##U60519|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487678|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##AJ487679|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_033356|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##X98173|CASP8|841|caspase 8, apoptosis-related cysteine peptidase##AK124115|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##BC031603|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_001127391|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##NM_139163|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##AK292283|ALS2CR12|130540|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12##AK314384|TRAK2|66008|trafficking protein, kinesin binding 2##AK054763|TRAK2|66008|trafficking protein, kinesin binding 2	0.025529	
chr4	48447930	48448008	reg1013294.p2	3.509	+	TSC_hg19_v1_chr4_+_48343571 BC006139 BC007701 BC012067 NM_020846 AB040891	-104356	+	BC040993 TSC_hg19_v1_chr4_+_48343485 AK291006	-104558	+	BC101711 BC101713 BC143487 NM_003215 TSC_hg19_v1_chr4_-_48271858	-176134	-	TSC_hg19_v1_chr4_+_48485353 AK126542 NM_152679 BC019066 BC012048 DQ892628 EU176704 AY704414	37458	+	TSC_hg19_v1_chr4_+_48492278 BC136265 AY191416 NM_175619	44312	+	TSC_hg19_v1_chr4_-_48782266 AL833444	334300	-	BC006139|SLAIN2|57606|SLAIN motif family, member 2##BC007701|SLAIN2|57606|SLAIN motif family, member 2##BC012067|SLAIN2|57606|SLAIN motif family, member 2##NM_020846|SLAIN2|57606|SLAIN motif family, member 2##AB040891|SLAIN2|57606|SLAIN motif family, member 2##BC040993|SLAIN2|57606|SLAIN motif family, member 2##AK291006|SLAIN2|57606|SLAIN motif family, member 2##BC101711|TEC|7006|tec protein tyrosine kinase##BC101713|TEC|7006|tec protein tyrosine kinase##BC143487|TEC|7006|tec protein tyrosine kinase##NM_003215|TEC|7006|tec protein tyrosine kinase##AK126542|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##NM_152679|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC019066|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC012048|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##DQ892628|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##EU176704|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##AY704414|SLC10A4|201780|solute carrier family 10 (sodium/bile acid cotransporter family), member 4##BC136265|ZAR1|326340|zygote arrest 1##AY191416|ZAR1|326340|zygote arrest 1##NM_175619|ZAR1|326340|zygote arrest 1##AL833444|FRYL|285527|FRY-like	0.0	
chr6	7189079	7189259	reg1027354.p2	3.509	+	BX647723 TSC_hg19_v1_chr6_+_7108910	-80266	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	-80946	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	-81134	+	BT007387 CR456961 AB464204 DQ892751 EU176743 TSC_hg19_v1_chr6_-_7313433 Z12830 AK075562 AK222762 AK222809 AK291550 AK312653 CR936719 BC007710 NM_003144	124277	-	AF414185 NM_001170692 NM_001170693 NM_205864 TSC_hg19_v1_chr6_-_7389974	200798	-	TSC_hg19_v1_chr6_+_7390042 AY094356 AK314467 BC006104 NM_031480 AK054568	200929	+	BX647723|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##BT007387|SSR1|6745|signal sequence receptor, alpha##CR456961|SSR1|6745|signal sequence receptor, alpha##DQ892751|SSR1|6745|signal sequence receptor, alpha##EU176743|SSR1|6745|signal sequence receptor, alpha##Z12830|SSR1|6745|signal sequence receptor, alpha##AK075562|SSR1|6745|signal sequence receptor, alpha##AK222762|SSR1|6745|signal sequence receptor, alpha##AK222809|SSR1|6745|signal sequence receptor, alpha##AK291550|SSR1|6745|signal sequence receptor, alpha##AK312653|SSR1|6745|signal sequence receptor, alpha##CR936719|SSR1|6745|signal sequence receptor, alpha##BC007710|SSR1|6745|signal sequence receptor, alpha##NM_003144|SSR1|6745|signal sequence receptor, alpha##AF414185|CAGE1|285782|cancer antigen 1##NM_001170692|CAGE1|285782|cancer antigen 1##NM_001170693|CAGE1|285782|cancer antigen 1##NM_205864|CAGE1|285782|cancer antigen 1##AY094356|RIOK1|83732|RIO kinase 1 (yeast)##AK314467|RIOK1|83732|RIO kinase 1 (yeast)##BC006104|RIOK1|83732|RIO kinase 1 (yeast)##NM_031480|RIOK1|83732|RIO kinase 1 (yeast)##AK054568|RIOK1|83732|RIO kinase 1 (yeast)	0.0	
chr7	158649118	158649299	reg1030549.p2	3.509	+	TSC_hg19_v1_chr7_-_158622236 AB527334 AY368150 NM_020728	-26948	-	TSC_hg19_v1_chr7_-_158622198 AB033054	-27017	-	TSC_hg19_v1_chr7_-_158611303 AK126214	-37838	-	TSC_hg19_v1_chr7_+_158649248 BC014491 NM_018051 CU677023	105	+	BT007118 DQ890571 DQ893732 BC010569 AK310386 L36566 U18810 AK308955 NM_003382 X95097	288347	-	None	None	None	AY368150|ESYT2|57488|extended synaptotagmin-like protein 2##NM_020728|ESYT2|57488|extended synaptotagmin-like protein 2##AB033054|ESYT2|57488|extended synaptotagmin-like protein 2##AK126214|ESYT2|57488|extended synaptotagmin-like protein 2##BC014491|WDR60|55112|WD repeat domain 60##NM_018051|WDR60|55112|WD repeat domain 60##BT007118|VIPR2|7434|vasoactive intestinal peptide receptor 2##DQ890571|VIPR2|7434|vasoactive intestinal peptide receptor 2##DQ893732|VIPR2|7434|vasoactive intestinal peptide receptor 2##BC010569|VIPR2|7434|vasoactive intestinal peptide receptor 2##AK310386|VIPR2|7434|vasoactive intestinal peptide receptor 2##L36566|VIPR2|7434|vasoactive intestinal peptide receptor 2##U18810|VIPR2|7434|vasoactive intestinal peptide receptor 2##AK308955|VIPR2|7434|vasoactive intestinal peptide receptor 2##NM_003382|VIPR2|7434|vasoactive intestinal peptide receptor 2##X95097|VIPR2|7434|vasoactive intestinal peptide receptor 2	0.0	
chr7	41921194	41921366	reg1025342.p1	3.509	+	AF218018 AK290584 BC007858 D49743 TSC_hg19_v1_chr7_-_41742684 NM_002192	-178595	-	AK299133 TSC_hg19_v1_chr7_+_40174603 AK296048 AK308764 AK307935 AK298516	-1746671	+	AF397013 TSC_hg19_v1_chr7_+_40174572 AK021870 NM_001193311 NM_001193312 NM_001193313 NM_024728 BC098117 BC098261 BC098310 BC098318	-1746749	+	NM_000168	355337	-	TSC_hg19_v1_chr7_-_42276797 AK308429	355515	-	TSC_hg19_v1_chr7_-_42951670 BC000769 BC001845 AK024820 AK225194 AK298865 NM_001099858 NM_024054	1030309	-	AF218018|INHBA|3624|inhibin, beta A##AK290584|INHBA|3624|inhibin, beta A##BC007858|INHBA|3624|inhibin, beta A##D49743|INHBA|3624|inhibin, beta A##NM_002192|INHBA|3624|inhibin, beta A##AK299133|C7orf10|79783|chromosome 7 open reading frame 10##AK296048|C7orf10|79783|chromosome 7 open reading frame 10##AK308764|C7orf10|79783|chromosome 7 open reading frame 10##AK307935|C7orf10|79783|chromosome 7 open reading frame 10##AK298516|C7orf10|79783|chromosome 7 open reading frame 10##AF397013|C7orf10|79783|chromosome 7 open reading frame 10##AK021870|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193311|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193312|C7orf10|79783|chromosome 7 open reading frame 10##NM_001193313|C7orf10|79783|chromosome 7 open reading frame 10##NM_024728|C7orf10|79783|chromosome 7 open reading frame 10##BC098117|C7orf10|79783|chromosome 7 open reading frame 10##BC098261|C7orf10|79783|chromosome 7 open reading frame 10##BC098310|C7orf10|79783|chromosome 7 open reading frame 10##BC098318|C7orf10|79783|chromosome 7 open reading frame 10##NM_000168|GLI3|2737|GLI family zinc finger 3##AK308429|GLI3|2737|GLI family zinc finger 3##BC000769|C7orf25|79020|chromosome 7 open reading frame 25##BC001845|C7orf25|79020|chromosome 7 open reading frame 25##AK024820|C7orf25|79020|chromosome 7 open reading frame 25##AK225194|C7orf25|79020|chromosome 7 open reading frame 25##AK298865|C7orf25|79020|chromosome 7 open reading frame 25##NM_001099858|C7orf25|79020|chromosome 7 open reading frame 25##NM_024054|C7orf25|79020|chromosome 7 open reading frame 25	0.0	
chr9	133814726	133814801	reg1030357.p2	3.509	+	AK300287 NM_001145106 TSC_hg19_v1_chr9_-_133814549	-272	-	BC032953 NM_032843 TSC_hg19_v1_chr9_-_133814253	-519	-	BC112892 AY358311 AK292489 TSC_hg19_v1_chr9_-_133814106	-712	-	AF041835 NM_006059 TSC_hg19_v1_chr9_+_133884573 AK075536	69787	+	NM_001185095 NM_001185096 NM_031426 TSC_hg19_v1_chr9_+_133971890	157115	+	TSC_hg19_v1_chr9_+_133971917 AY359067 AK057789 AK314600 AK022845 AK128526 AK091912 AL136566 AL833896 BC009826 BC021253 AM392853 AM393301 AM393860	157195	+	AK300287|FIBCD1|84929|fibrinogen C domain containing 1##NM_001145106|FIBCD1|84929|fibrinogen C domain containing 1##BC032953|FIBCD1|84929|fibrinogen C domain containing 1##NM_032843|FIBCD1|84929|fibrinogen C domain containing 1##BC112892|FIBCD1|84929|fibrinogen C domain containing 1##AY358311|FIBCD1|84929|fibrinogen C domain containing 1##AK292489|FIBCD1|84929|fibrinogen C domain containing 1##AF041835|LAMC3|10319|laminin, gamma 3##NM_006059|LAMC3|10319|laminin, gamma 3##AK075536|LAMC3|10319|laminin, gamma 3##NM_001185095|AIF1L|83543|allograft inflammatory factor 1-like##NM_001185096|AIF1L|83543|allograft inflammatory factor 1-like##NM_031426|AIF1L|83543|allograft inflammatory factor 1-like##AY359067|AIF1L|83543|allograft inflammatory factor 1-like##AK057789|AIF1L|83543|allograft inflammatory factor 1-like##AK314600|AIF1L|83543|allograft inflammatory factor 1-like##AK022845|AIF1L|83543|allograft inflammatory factor 1-like##AK128526|AIF1L|83543|allograft inflammatory factor 1-like##AK091912|AIF1L|83543|allograft inflammatory factor 1-like##AL136566|AIF1L|83543|allograft inflammatory factor 1-like##AL833896|AIF1L|83543|allograft inflammatory factor 1-like##BC009826|AIF1L|83543|allograft inflammatory factor 1-like##BC021253|AIF1L|83543|allograft inflammatory factor 1-like##AM392853|AIF1L|83543|allograft inflammatory factor 1-like##AM393301|AIF1L|83543|allograft inflammatory factor 1-like##AM393860|AIF1L|83543|allograft inflammatory factor 1-like	0.61163	CTCF.p2:2:0.612
chr9	99329403	99329481	reg1021773.p2	3.509	+	TSC_hg19_v1_chr9_-_99329110 AK126388 NM_001077181	-295	-	TSC_hg19_v1_chr9_+_99212450 NM_014282 BC018788 AF241831 AB463760	-116973	+	TSC_hg19_v1_chr9_-_99180672 AY554164 AY554165 NM_153695	-148758	-	TSC_hg19_v1_chr9_-_99382126 AF064104 AF064105 NM_003671 NM_033331	52678	-	TSC_hg19_v1_chr9_-_99417600 BC136501 BC136503 NM_153698	88168	-	AB023189 NM_014930 TSC_hg19_v1_chr9_-_99540352 BC036676 BC068587 BC058022 AK292600	210911	-	AK126388|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_001077181|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_014282|HABP4|22927|hyaluronan binding protein 4##BC018788|HABP4|22927|hyaluronan binding protein 4##AF241831|HABP4|22927|hyaluronan binding protein 4##AY554164|ZNF367|195828|zinc finger protein 367##AY554165|ZNF367|195828|zinc finger protein 367##NM_153695|ZNF367|195828|zinc finger protein 367##AF064104|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##AF064105|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_003671|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##NM_033331|CDC14B|8555|CDC14 cell division cycle 14 homolog B (S. cerevisiae)##BC136501|C9orf21|195827|chromosome 9 open reading frame 21##BC136503|C9orf21|195827|chromosome 9 open reading frame 21##NM_153698|C9orf21|195827|chromosome 9 open reading frame 21##AB023189|ZNF510|22869|zinc finger protein 510##NM_014930|ZNF510|22869|zinc finger protein 510##BC036676|ZNF510|22869|zinc finger protein 510##BC068587|ZNF510|22869|zinc finger protein 510##BC058022|ZNF510|22869|zinc finger protein 510##AK292600|ZNF510|22869|zinc finger protein 510	0.714918	CTCF.p2:41:0.715
chr1	191398076	191398149	reg1045252.p1	3.508	+	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	-951377	-	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-4600024	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-4748622	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	729491	+	AY643711 NM_001039152	888009	+	NM_002922 AK303138 AK315607 TSC_hg19_v1_chr1_+_192544902 AK093544 BC015510 X73427 DQ890651 DQ893831 AB590399 AF493925 BT006668	1146796	+	AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21##NM_002922|RGS1|5996|regulator of G-protein signaling 1##AK303138|RGS1|5996|regulator of G-protein signaling 1##AK315607|RGS1|5996|regulator of G-protein signaling 1##AK093544|RGS1|5996|regulator of G-protein signaling 1##BC015510|RGS1|5996|regulator of G-protein signaling 1##X73427|RGS1|5996|regulator of G-protein signaling 1##DQ890651|RGS1|5996|regulator of G-protein signaling 1##DQ893831|RGS1|5996|regulator of G-protein signaling 1##AF493925|RGS1|5996|regulator of G-protein signaling 1##BT006668|RGS1|5996|regulator of G-protein signaling 1	0.0	
chr1	25664532	25664599	reg1040291.p1	3.508	+	AK297151 NM_001127691 NM_016124 X63094 BC139922 AF510069 AF510070 AF312679 Z97026 DQ451878 X63097 AB018966 AB018967 AB018968 AB018969 AB037270 AB046420 AB049754 AF037626 AF177938 AF187846 AJ704215 AM183924 AY449381 AY449382 AY449383 AY449384 AY449385 AY751491 AY751492 AY751493 AY751494 AY751495 AY751496 FR745438 FR745439 FR745440 FR745441 JF436967 L08429 S57971 S70174 S73913 S78509 S82449 EU557240 EU557241 EU661905 EU661906	-65573	+	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	-90592	-	BC065040 TSC_hg19_v1_chr1_-_25573922	-90642	-	TSC_hg19_v1_chr1_+_25664821 NM_014313 AK311092 AF087880 AL136627 AK299180 AK311355 AK312588 AY358650 AY071927 BC007341 BC066908 AF081282	269	+	AB018644 AB018645 AB030388 AB049753 AF056965 AF177938 AM295498 AM295506 DQ178642 DQ266353 DQ266400 DQ322275 FR691748 FR691750 GU474431 GU563377 GU810838 HE572747 JF436968 S57967 X63096 X63095 AY603478 X63098 Z97026 BC075081 M34015 AF510065 AF510066 AF510067 AF510068 X54534 NM_020485 NM_138616 NM_138617 NM_138618 BC139905	82775	-	TSC_hg19_v1_chr1_+_25757387 AK311472 NM_018202 AY845015 BC007687 AK001609 AY845035 AY845036 BC032427 BC020801	92920	+	AK297151|RHD|6007|Rh blood group, D antigen##NM_001127691|RHD|6007|Rh blood group, D antigen##NM_016124|RHD|6007|Rh blood group, D antigen##X63094|RHD|6007|Rh blood group, D antigen##BC139922|RHD|6007|Rh blood group, D antigen##AF510069|RHD|6007|Rh blood group, D antigen##AF510070|RHD|6007|Rh blood group, D antigen##AF312679|RHD|6007|Rh blood group, D antigen##Z97026|RHD|6007|Rh blood group, D antigen##DQ451878|RHD|6007|Rh blood group, D antigen##X63097|RHD|6007|Rh blood group, D antigen##AB018966|RHD|6007|Rh blood group, D antigen##AB018967|RHD|6007|Rh blood group, D antigen##AB018968|RHD|6007|Rh blood group, D antigen##AB018969|RHD|6007|Rh blood group, D antigen##AB037270|RHD|6007|Rh blood group, D antigen##AB046420|RHD|6007|Rh blood group, D antigen##AB049754|RHD|6007|Rh blood group, D antigen##AF037626|RHD|6007|Rh blood group, D antigen##AF177938|RHD|6007|Rh blood group, D antigen##AF187846|RHD|6007|Rh blood group, D antigen##AJ704215|RHD|6007|Rh blood group, D antigen##AM183924|RHD|6007|Rh blood group, D antigen##AY449381|RHD|6007|Rh blood group, D antigen##AY449382|RHD|6007|Rh blood group, D antigen##AY449383|RHD|6007|Rh blood group, D antigen##AY449384|RHD|6007|Rh blood group, D antigen##AY449385|RHD|6007|Rh blood group, D antigen##AY751491|RHD|6007|Rh blood group, D antigen##AY751492|RHD|6007|Rh blood group, D antigen##AY751493|RHD|6007|Rh blood group, D antigen##AY751494|RHD|6007|Rh blood group, D antigen##AY751495|RHD|6007|Rh blood group, D antigen##AY751496|RHD|6007|Rh blood group, D antigen##FR745438|RHD|6007|Rh blood group, D antigen##FR745439|RHD|6007|Rh blood group, D antigen##FR745440|RHD|6007|Rh blood group, D antigen##FR745441|RHD|6007|Rh blood group, D antigen##L08429|RHD|6007|Rh blood group, D antigen##S57971|RHD|6007|Rh blood group, D antigen##S70174|RHD|6007|Rh blood group, D antigen##S73913|RHD|6007|Rh blood group, D antigen##S78509|RHD|6007|Rh blood group, D antigen##S82449|RHD|6007|Rh blood group, D antigen##EU557240|RHD|6007|Rh blood group, D antigen##EU557241|RHD|6007|Rh blood group, D antigen##EU661905|RHD|6007|Rh blood group, D antigen##EU661906|RHD|6007|Rh blood group, D antigen##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##NM_014313|TMEM50A|23585|transmembrane protein 50A##AK311092|TMEM50A|23585|transmembrane protein 50A##AF087880|TMEM50A|23585|transmembrane protein 50A##AL136627|TMEM50A|23585|transmembrane protein 50A##AK299180|TMEM50A|23585|transmembrane protein 50A##AK311355|TMEM50A|23585|transmembrane protein 50A##AK312588|TMEM50A|23585|transmembrane protein 50A##AY358650|TMEM50A|23585|transmembrane protein 50A##AY071927|TMEM50A|23585|transmembrane protein 50A##BC007341|TMEM50A|23585|transmembrane protein 50A##BC066908|TMEM50A|23585|transmembrane protein 50A##AF081282|TMEM50A|23585|transmembrane protein 50A##AB018644|RHCE|6006|Rh blood group, CcEe antigens##AB018645|RHCE|6006|Rh blood group, CcEe antigens##AB030388|RHCE|6006|Rh blood group, CcEe antigens##AB049753|RHCE|6006|Rh blood group, CcEe antigens##AF056965|RHCE|6006|Rh blood group, CcEe antigens##AF177938|RHD|6007|Rh blood group, D antigen##AM295498|RHCE|6006|Rh blood group, CcEe antigens##AM295506|RHCE|6006|Rh blood group, CcEe antigens##DQ178642|RHCE|6006|Rh blood group, CcEe antigens##DQ266353|RHCE|6006|Rh blood group, CcEe antigens##DQ266400|RHCE|6006|Rh blood group, CcEe antigens##DQ322275|RHCE|6006|Rh blood group, CcEe antigens##FR691748|RHCE|6006|Rh blood group, CcEe antigens##FR691750|RHCE|6006|Rh blood group, CcEe antigens##GU474431|RHCE|6006|Rh blood group, CcEe antigens##GU563377|RHCE|6006|Rh blood group, CcEe antigens##GU810838|RHCE|6006|Rh blood group, CcEe antigens##S57967|RHCE|6006|Rh blood group, CcEe antigens##X63096|RHCE|6006|Rh blood group, CcEe antigens##X63095|RHCE|6006|Rh blood group, CcEe antigens##AY603478|RHCE|6006|Rh blood group, CcEe antigens##X63098|RHCE|6006|Rh blood group, CcEe antigens##Z97026|RHD|6007|Rh blood group, D antigen##BC075081|RHCE|6006|Rh blood group, CcEe antigens##M34015|RHCE|6006|Rh blood group, CcEe antigens##AF510065|RHCE|6006|Rh blood group, CcEe antigens##AF510066|RHCE|6006|Rh blood group, CcEe antigens##AF510067|RHCE|6006|Rh blood group, CcEe antigens##AF510068|RHCE|6006|Rh blood group, CcEe antigens##X54534|RHCE|6006|Rh blood group, CcEe antigens##NM_020485|RHCE|6006|Rh blood group, CcEe antigens##NM_138616|RHCE|6006|Rh blood group, CcEe antigens##NM_138617|RHCE|6006|Rh blood group, CcEe antigens##NM_138618|RHCE|6006|Rh blood group, CcEe antigens##BC139905|RHCE|6006|Rh blood group, CcEe antigens##AK311472|TMEM57|55219|transmembrane protein 57##NM_018202|TMEM57|55219|transmembrane protein 57##AY845015|TMEM57|55219|transmembrane protein 57##BC007687|TMEM57|55219|transmembrane protein 57##AK001609|TMEM57|55219|transmembrane protein 57##AY845035|TMEM57|55219|transmembrane protein 57##AY845036|TMEM57|55219|transmembrane protein 57##BC032427|TMEM57|55219|transmembrane protein 57##BC020801|TMEM57|55219|transmembrane protein 57	0.0	
chr13	47213808	47213875	reg1032683.p2	3.508	+	TSC_hg19_v1_chr13_+_47127518 AB385418 HQ258591	-86334	+	BC112937 BC117472 BC143883 TSC_hg19_v1_chr13_+_47127418	-86421	+	TSC_hg19_v1_chr13_+_47127313 AK292898 AB023233	-86518	+	TSC_hg19_v1_chr13_-_47371297 BC001169 D28416 AK098540 AF112219 NM_001984	157474	-	AK314132 BX647777 AK302787 NM_000621 NM_001165947	257226	-	TSC_hg19_v1_chr13_-_48575410 AB529139 BC027587 AK302311 AK315513 AK001458 AK316041 BX640602 AF087890 AK001847 AK225452 AB035863 NM_003850	1361610	-	HQ258591|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC112937|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC117472|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC143883|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AK292898|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##AB023233|LRCH1|23143|leucine-rich repeats and calponin homology (CH) domain containing 1##BC001169|ESD|2098|esterase D##D28416|ESD|2098|esterase D##AK098540|ESD|2098|esterase D##AF112219|ESD|2098|esterase D##NM_001984|ESD|2098|esterase D##AK314132|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BX647777|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##AK302787|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_000621|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##NM_001165947|HTR2A|3356|5-hydroxytryptamine (serotonin) receptor 2A##BC027587|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK302311|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK315513|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001458|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK316041|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##BX640602|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AF087890|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK001847|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AK225452|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##AB035863|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit##NM_003850|SUCLA2|8803|succinate-CoA ligase, ADP-forming, beta subunit	0.0	
chr17_ctg5_hap1	937256	937372	reg1037441.p2	3.508	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.999836	CTCF.p2:-17:1.000
chr18	60960475	60960656	reg1035279.p2	3.508	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-164630	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-576257	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-576639	+	BC027258 NM_000633 NM_000657	25995	-	TSC_hg19_v1_chr18_-_60986977 X06487	26428	-	TSC_hg19_v1_chr18_-_60987309 M13994	26721	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr2	127865476	127865553	reg1037779.p1	3.508	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	-773	-	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-451722	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-451807	+	BC039307 NM_001001665	97828	-	AK131190 TSC_hg19_v1_chr2_-_127977781	112203	-	AK091500 CU679129 DQ893802 EU176179 AB384812 AK095557 AK290474 AK309405 TSC_hg19_v1_chr2_-_128051698	186163	-	AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK091500|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##DQ893802|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##EU176179|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK095557|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK290474|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)##AK309405|ERCC3|2071|excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)	0.034405	
chr2	25520853	25520954	reg1039638.p1	3.508	+	TSC_hg19_v1_chr2_-_25475127 AF480163 NM_153759	-45697	-	TSC_hg19_v1_chr2_-_25468920 AK025230	-51925	-	TSC_hg19_v1_chr2_-_25467080 BC023612	-53768	-	TSC_hg19_v1_chr2_-_25536762 AB527956 EU446951	15904	-	AF067972 TSC_hg19_v1_chr2_-_25564801 BC043617 NM_022552	43896	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	44425	-	AF480163|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_153759|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##EU446951|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF067972|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC043617|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_022552|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.06999	
chr3	137758616	137758734	reg1036424.p1	3.508	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	-29672	+	AK098474 NM_001002026 AF349452	-40996	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	-275528	+	AK057406 NM_001170538	73646	-	BC033308 NM_173543 TSC_hg19_v1_chr3_-_137834481	75800	-	BC119639 BC119640 AF141315 AK225668 NM_016161	92500	-	AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK057406|DZIP1L|199221|DAZ interacting protein 1-like##NM_001170538|DZIP1L|199221|DAZ interacting protein 1-like##BC033308|DZIP1L|199221|DAZ interacting protein 1-like##NM_173543|DZIP1L|199221|DAZ interacting protein 1-like##BC119639|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##BC119640|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##AF141315|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##AK225668|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase##NM_016161|A4GNT|51146|alpha-1,4-N-acetylglucosaminyltransferase	0.492618	CTCF.p2:-3:0.493
chr3	71908432	71908551	reg1036323.p1	3.508	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-74220	-	AK313656 NM_173359	-104568	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-104969	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	989057	-	BC017274 TSC_hg19_v1_chr3_-_72897575	989084	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	989101	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr3	72532179	72532290	reg1039847.p1	3.508	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-697963	-	AK313656 NM_173359	-728311	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-728712	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	365314	-	BC017274 TSC_hg19_v1_chr3_-_72897575	365341	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	365358	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr5	130707790	130707862	reg1035735.p2	3.508	+	TSC_hg19_v1_chr5_+_130599794 BC058909	-108026	+	AK312406 TSC_hg19_v1_chr5_+_130599768	-108058	+	TSC_hg19_v1_chr5_+_130599764 BC023555 BC050430	-108070	+	AF478468 AF478469 AB527407 TSC_hg19_v1_chr5_-_130970764	262931	-	BC140820 BC144627 TSC_hg19_v1_chr5_-_130970834	262993	-	BC133703 TSC_hg19_v1_chr5_-_130970893 AF394782 AK302640	263052	-	BC058909|CDC42SE2|56990|CDC42 small effector 2##AK312406|CDC42SE2|56990|CDC42 small effector 2##BC023555|CDC42SE2|56990|CDC42 small effector 2##BC050430|CDC42SE2|56990|CDC42 small effector 2##AF478468|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF478469|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC140820|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC144627|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##BC133703|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AF394782|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6##AK302640|RAPGEF6|51735|Rap guanine nucleotide exchange factor (GEF) 6	0.0	
chr10	112115138	112115296	reg1039613.p1	3.507	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-50517	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-50624	-	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	-129396	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	142534	+	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	212275	+	AF067163 TSC_hg19_v1_chr10_+_112344155	228898	+	BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3	0.0	
chr1	101775532	101775644	reg1010277.p3	3.507	+	TSC_hg19_v1_chr1_+_101702575 AK312493 BC018650 M31210	-73018	+	NM_001400 TSC_hg19_v1_chr1_+_101702451 AK297005	-73207	+	TSC_hg19_v1_chr1_+_101491413 BX538249	-284155	+	CU692678 EU176509 AF397394 AF397395 AF397396 AF397397 TSC_hg19_v1_chr1_-_102462600 BC022531 AK095724	686899	-	NM_058170 TSC_hg19_v1_chr1_-_102462791	687202	-	AB208844 TSC_hg19_v1_chr1_-_103496798	1721195	-	AK312493|S1PR1|1901|sphingosine-1-phosphate receptor 1##BC018650|S1PR1|1901|sphingosine-1-phosphate receptor 1##M31210|S1PR1|1901|sphingosine-1-phosphate receptor 1##NM_001400|S1PR1|1901|sphingosine-1-phosphate receptor 1##AK297005|S1PR1|1901|sphingosine-1-phosphate receptor 1##EU176509|OLFM3|118427|olfactomedin 3##AF397394|OLFM3|118427|olfactomedin 3##AF397395|OLFM3|118427|olfactomedin 3##AF397396|OLFM3|118427|olfactomedin 3##AF397397|OLFM3|118427|olfactomedin 3##BC022531|OLFM3|118427|olfactomedin 3##AK095724|OLFM3|118427|olfactomedin 3##NM_058170|OLFM3|118427|olfactomedin 3##AB208844|COL11A1|1301|collagen, type XI, alpha 1	0.0	
chr11	124736309	124736407	reg1030643.p1	3.507	+	AY509035 TSC_hg19_v1_chr11_+_124735327 AK056544 NM_022370 AK291045	-1033	+	TSC_hg19_v1_chr11_-_124670286 BC064919 AK026995 NM_024631	-66039	-	TSC_hg19_v1_chr11_-_124670282 AK303902	-66089	-	TSC_hg19_v1_chr11_+_124746737 AK024697 AK225076 AK298792 AK295475	10372	+	AY358083 AK074163 AK302628 BC064643 BC039602 BC111562 BC111748 AK027852 AK289769 AF361473 NM_019055	31397	-	AY275431 NM_001037558	52787	+	AY509035|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##NM_022370|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK291045|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##BC064919|C11orf61|79684|chromosome 11 open reading frame 61##AK026995|C11orf61|79684|chromosome 11 open reading frame 61##NM_024631|C11orf61|79684|chromosome 11 open reading frame 61##AK303902|C11orf61|79684|chromosome 11 open reading frame 61##AK024697|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK225076|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK298792|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AK295475|ROBO3|64221|roundabout, axon guidance receptor, homolog 3 (Drosophila)##AY358083|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK074163|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK302628|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC064643|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC039602|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC111562|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##BC111748|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK027852|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AK289769|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AF361473|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##NM_019055|ROBO4|54538|roundabout, axon guidance receptor, homolog 4 (Drosophila)##AY275431|HEPN1|641654|hepatocellular carcinoma, down-regulated 1##NM_001037558|HEPN1|641654|hepatocellular carcinoma, down-regulated 1	0.054693	
chr12	106696325	106696454	reg1026735.p3	3.507	+	BC067357 BC082972 TSC_hg19_v1_chr12_-_106641928 NM_006825 X69910 BC094824 BC037578 AK223563 AK123693 BC025341	-54542	-	AB011109 BC152462 NM_014840	-162579	-	TSC_hg19_v1_chr12_-_106532646 AK289992 AK027302	-163707	-	TSC_hg19_v1_chr12_+_106696595 BC033617 NM_152772 BC017872 AF306671 AF306858 AK314055	183	+	NM_018082 TSC_hg19_v1_chr12_+_106751498 BX537447	55081	+	TSC_hg19_v1_chr12_+_106751589 BC046238 AK291635 AY092084	55188	+	BC067357|CKAP4|10970|cytoskeleton-associated protein 4##BC082972|CKAP4|10970|cytoskeleton-associated protein 4##NM_006825|CKAP4|10970|cytoskeleton-associated protein 4##X69910|CKAP4|10970|cytoskeleton-associated protein 4##BC094824|CKAP4|10970|cytoskeleton-associated protein 4##BC037578|CKAP4|10970|cytoskeleton-associated protein 4##AK223563|CKAP4|10970|cytoskeleton-associated protein 4##AK123693|CKAP4|10970|cytoskeleton-associated protein 4##BC025341|CKAP4|10970|cytoskeleton-associated protein 4##AB011109|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC152462|NUAK1|9891|NUAK family, SNF1-like kinase, 1##NM_014840|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK289992|NUAK1|9891|NUAK family, SNF1-like kinase, 1##AK027302|NUAK1|9891|NUAK family, SNF1-like kinase, 1##BC033617|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_152772|TCP11L2|255394|t-complex 11 (mouse)-like 2##BC017872|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306671|TCP11L2|255394|t-complex 11 (mouse)-like 2##AF306858|TCP11L2|255394|t-complex 11 (mouse)-like 2##AK314055|TCP11L2|255394|t-complex 11 (mouse)-like 2##NM_018082|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BX537447|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##BC046238|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AK291635|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B##AY092084|POLR3B|55703|polymerase (RNA) III (DNA directed) polypeptide B	0.0	
chr1	219649793	219649927	reg1035026.p2	3.507	+	TSC_hg19_v1_chr1_+_219347219 AK123628 AK309689 AK291542 BC016711 AK129913 AY341430	-302618	+	TSC_hg19_v1_chr1_+_219347170 NM_138794	-302702	+	M19154 TSC_hg19_v1_chr1_+_218519634	-1130255	+	BC036078 TSC_hg19_v1_chr1_-_220101540	451669	-	AB464233 TSC_hg19_v1_chr1_-_220101784	451931	-	TSC_hg19_v1_chr1_-_220101974 AY212919 AK090806 AX746624 NM_018713	452105	-	AK123628|LYPLAL1|127018|lysophospholipase-like 1##AK309689|LYPLAL1|127018|lysophospholipase-like 1##AK291542|LYPLAL1|127018|lysophospholipase-like 1##BC016711|LYPLAL1|127018|lysophospholipase-like 1##AK129913|LYPLAL1|127018|lysophospholipase-like 1##AY341430|LYPLAL1|127018|lysophospholipase-like 1##NM_138794|LYPLAL1|127018|lysophospholipase-like 1##M19154|TGFB2|7042|transforming growth factor, beta 2##BC036078|SLC30A10|55532|solute carrier family 30, member 10##AY212919|SLC30A10|55532|solute carrier family 30, member 10##AK090806|SLC30A10|55532|solute carrier family 30, member 10##NM_018713|SLC30A10|55532|solute carrier family 30, member 10	0.0	
chr14	97477264	97477386	reg1036221.p1	3.507	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-213610	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-508541	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-508579	+	AK098639 NM_182560	1700624	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	2260292	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	2260565	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.0	
chr15	51579039	51579122	reg1013745.p1	3.507	+	AY517501 NM_207381	-181608	-	BC127701 BC127702 TSC_hg19_v1_chr15_-_51386865 AK123281	-192230	-	TSC_hg19_v1_chr15_+_51200903 AK297290 NM_001252127 NM_007347 BC126308 BC130466 BC144025 BC144030 AF155156 AB030653 HQ258532 CR749604	-378153	+	DQ118405 M22246 X13589 BC035959 AK291778 BC020767 S52793 BC022896 BC056258 BC107785 NM_000103 NM_031226	51684	-	NM_181789 TSC_hg19_v1_chr15_+_51633764 AK172756	54714	+	TSC_hg19_v1_chr15_-_51914953 BC140781 BC144539 AF389880 AK000156 NM_001174116 NM_001174117 NM_015263	335893	-	AY517501|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##NM_207381|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127701|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##BC127702|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK123281|TNFAIP8L3|388121|tumor necrosis factor, alpha-induced protein 8-like 3##AK297290|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_001252127|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##NM_007347|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC126308|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC130466|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144025|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##BC144030|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AF155156|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##AB030653|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##HQ258532|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##CR749604|AP4E1|23431|adaptor-related protein complex 4, epsilon 1 subunit##DQ118405|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##M22246|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##X13589|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC035959|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##AK291778|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC020767|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC022896|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC056258|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##BC107785|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_000103|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_031226|CYP19A1|1588|cytochrome P450, family 19, subfamily A, polypeptide 1##NM_181789|GLDN|342035|gliomedin##AK172756|GLDN|342035|gliomedin##BC140781|DMXL2|23312|Dmx-like 2##BC144539|DMXL2|23312|Dmx-like 2##AF389880|DMXL2|23312|Dmx-like 2##AK000156|DMXL2|23312|Dmx-like 2##NM_001174116|DMXL2|23312|Dmx-like 2##NM_001174117|DMXL2|23312|Dmx-like 2##NM_015263|DMXL2|23312|Dmx-like 2	0.567701	CTCF.p2:40:0.568
chr17	46184633	46184752	reg1033688.p1	3.507	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-5871	-	NM_006807 TSC_hg19_v1_chr17_-_46178605	-6109	-	BX647976 TSC_hg19_v1_chr17_+_46126143	-58551	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	293	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	460	+	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	322846	-	U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##NM_006807|CBX1|10951|chromobox homolog 1##BX647976|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1	0.0	
chr22	33868364	33868506	reg1038939.p1	3.507	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-414080	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-465709	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-670683	+	AJ007583 AB011181 NM_004737 NM_133642	447935	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1593714	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1785041	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr2	42722396	42722469	reg1009881.p2	3.507	+	TSC_hg19_v1_chr2_+_42721701 AK127245	-730	+	TSC_hg19_v1_chr2_-_42721118 AF454547 AF454548 BC071558 AF348982 NM_133329 NM_172344	-1229	-	TSC_hg19_v1_chr2_-_42720476 AB070604 CU687106	-1874	-	TSC_hg19_v1_chr2_+_42795781 BC053631 NM_020744 BC004227	73289	+	TSC_hg19_v1_chr2_+_42795855 AK027304 CU678620	73465	+	AY158687 AB528920 AB083055 BC063549 NM_148962	268868	-	AK127245|MTA3|57504|metastasis associated 1 family, member 3##AF454547|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF454548|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##BC071558|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AF348982|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##NM_133329|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##NM_172344|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##AB070604|KCNG3|170850|potassium voltage-gated channel, subfamily G, member 3##BC053631|MTA3|57504|metastasis associated 1 family, member 3##NM_020744|MTA3|57504|metastasis associated 1 family, member 3##BC004227|MTA3|57504|metastasis associated 1 family, member 3##AK027304|MTA3|57504|metastasis associated 1 family, member 3##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1	0.0	
chr2	71382398	71382521	reg1005593.p2	3.507	+	TSC_hg19_v1_chr2_+_71357768 AK310931 BC041084 X98494	-24674	+	TSC_hg19_v1_chr2_+_71357454 AK056862 NM_005791 BC126389	-24970	+	DQ891375 DQ894553 TSC_hg19_v1_chr2_-_71357360 BC020825 AF364547 NM_032601	-25080	-	TSC_hg19_v1_chr2_-_71454205 AB032981 NM_020459	71771	-	TSC_hg19_v1_chr2_+_71503722 AK303723 AK309221 AK293938	121267	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	176438	+	AK310931|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC041084|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##X98494|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##AK056862|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##NM_005791|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC126389|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##DQ891375|MCEE|84693|methylmalonyl CoA epimerase##DQ894553|MCEE|84693|methylmalonyl CoA epimerase##BC020825|MCEE|84693|methylmalonyl CoA epimerase##AF364547|MCEE|84693|methylmalonyl CoA epimerase##NM_032601|MCEE|84693|methylmalonyl CoA epimerase##AB032981|PAIP2B|400961|poly(A) binding protein interacting protein 2B##NM_020459|PAIP2B|400961|poly(A) binding protein interacting protein 2B##AK303723|ZNF638|27332|zinc finger protein 638##AK309221|ZNF638|27332|zinc finger protein 638##AK293938|ZNF638|27332|zinc finger protein 638##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638	0.0	
chr3	125502130	125502228	reg1042856.p1	3.507	+	TSC_hg19_v1_chr3_-_125314371 NM_022776	-187806	-	TSC_hg19_v1_chr3_-_125239050 NM_003794	-263126	-	AF065485 TSC_hg19_v1_chr3_-_125239047 CU676320 DQ892131 DQ895325 AB528425 AK001835 AK298972 BC018762 BC021002	-263148	-	TSC_hg19_v1_chr3_+_125635451 BC032772 BC041080	133277	+	BC073816 NM_001015050 NM_001195223	153704	-	AF231410 NM_001012337 BC141849 AK302014	185875	+	NM_022776|OSBPL11|114885|oxysterol binding protein-like 11##NM_003794|SNX4|8723|sorting nexin 4##AF065485|SNX4|8723|sorting nexin 4##DQ892131|SNX4|8723|sorting nexin 4##DQ895325|SNX4|8723|sorting nexin 4##AK001835|SNX4|8723|sorting nexin 4##AK298972|SNX4|8723|sorting nexin 4##BC018762|SNX4|8723|sorting nexin 4##BC032772|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC041080|LOC100125556|100125556|family with sequence similarity 86, member A pseudogene##BC073816|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001015050|ALG1L|200810|asparagine-linked glycosylation 1-like##NM_001195223|ALG1L|200810|asparagine-linked glycosylation 1-like##AF231410|ROPN1B|152015|rhophilin associated tail protein 1B##NM_001012337|ROPN1B|152015|rhophilin associated tail protein 1B##BC141849|ROPN1B|152015|rhophilin associated tail protein 1B	0.0	
chr3	156747466	156747550	reg1032496.p2	3.507	+	AK094480 AK131473 NM_001004316 BC041967 NM_001193283	-203397	+	BC034397 NM_001184718	-353056	+	AK097785 TSC_hg19_v1_chr3_+_156393472	-354093	+	AF367476 AF367477 TSC_hg19_v1_chr3_-_156877937 BC038394 BC067812 AF180920 AK022974 BC007081	130401	-	NM_020307 AK122738	131006	-	AK312705 NM_002852 BC039733 TSC_hg19_v1_chr3_+_157154638 X63613 BC027887 M31166 X63053 AB590531	407142	+	AK094480|LEKR1|389170|leucine, glutamate and lysine rich 1##AK131473|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001004316|LEKR1|389170|leucine, glutamate and lysine rich 1##BC041967|LEKR1|389170|leucine, glutamate and lysine rich 1##NM_001193283|LEKR1|389170|leucine, glutamate and lysine rich 1##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AF367476|CCNL1|57018|cyclin L1##AF367477|CCNL1|57018|cyclin L1##BC038394|CCNL1|57018|cyclin L1##BC067812|CCNL1|57018|cyclin L1##AF180920|CCNL1|57018|cyclin L1##AK022974|CCNL1|57018|cyclin L1##BC007081|CCNL1|57018|cyclin L1##NM_020307|CCNL1|57018|cyclin L1##AK122738|CCNL1|57018|cyclin L1##AK312705|PTX3|5806|pentraxin 3, long##NM_002852|PTX3|5806|pentraxin 3, long##BC039733|PTX3|5806|pentraxin 3, long##X63613|PTX3|5806|pentraxin 3, long##BC027887|PTX3|5806|pentraxin 3, long##M31166|PTX3|5806|pentraxin 3, long##X63053|PTX3|5806|pentraxin 3, long	0.0	
chr3	8705441	8705570	reg1011503.p2	3.507	+	TSC_hg19_v1_chr3_-_8693765 AB024705 NM_015931 BC052614	-11751	-	TSC_hg19_v1_chr3_+_8543540 AK294455 AK293849 AF216709 DQ891747 DQ894926	-161924	+	AK300803 TSC_hg19_v1_chr3_+_8543509 AK022176 NM_014583 AF169284 BC000646	-161990	+	AK291892 NM_001234 NM_033337 BC069368 AF036365 BC102033 BC102036 BC102037 Y14747 CU686780 AF043101	70020	+	X64878 TSC_hg19_v1_chr3_-_8811121 AK313830	105581	-	TSC_hg19_v1_chr3_-_8811300 NM_000916	105779	-	AB024705|C3orf32|51066|chromosome 3 open reading frame 32##NM_015931|C3orf32|51066|chromosome 3 open reading frame 32##BC052614|C3orf32|51066|chromosome 3 open reading frame 32##AK294455|LMCD1|29995|LIM and cysteine-rich domains 1##AK293849|LMCD1|29995|LIM and cysteine-rich domains 1##AF216709|LMCD1|29995|LIM and cysteine-rich domains 1##DQ891747|LMCD1|29995|LIM and cysteine-rich domains 1##DQ894926|LMCD1|29995|LIM and cysteine-rich domains 1##AK300803|LMCD1|29995|LIM and cysteine-rich domains 1##AK022176|LMCD1|29995|LIM and cysteine-rich domains 1##NM_014583|LMCD1|29995|LIM and cysteine-rich domains 1##AF169284|LMCD1|29995|LIM and cysteine-rich domains 1##BC000646|LMCD1|29995|LIM and cysteine-rich domains 1##AK291892|CAV3|859|caveolin 3##NM_001234|CAV3|859|caveolin 3##NM_033337|CAV3|859|caveolin 3##BC069368|CAV3|859|caveolin 3##AF036365|CAV3|859|caveolin 3##BC102033|CAV3|859|caveolin 3##BC102036|CAV3|859|caveolin 3##BC102037|CAV3|859|caveolin 3##Y14747|CAV3|859|caveolin 3##AF043101|CAV3|859|caveolin 3##X64878|OXTR|5021|oxytocin receptor##AK313830|OXTR|5021|oxytocin receptor##NM_000916|OXTR|5021|oxytocin receptor	0.0	
chr4	170322382	170322451	reg1038246.p2	3.507	+	TSC_hg19_v1_chr4_-_170192202 NM_020870	-130196	-	AK021429 TSC_hg19_v1_chr4_-_170192108	-130309	-	TSC_hg19_v1_chr4_-_170192099 BC053671	-130369	-	BC015147 BC114491 AB067488 CR933642 AL050385 TSC_hg19_v1_chr4_-_170533735 BC068201 CR936672	211220	-	TSC_hg19_v1_chr4_-_170533762 NM_001199397 NM_001199398 NM_001199399 NM_001199400 NM_012224	211353	-	TSC_hg19_v1_chr4_+_170541683 NM_001243372 NM_001829 NM_173872	219255	+	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1##AK021429|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1##BC015147|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC114491|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AB067488|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR933642|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AL050385|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC068201|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR936672|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199397|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199398|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199399|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199400|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_012224|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001243372|CLCN3|1182|chloride channel 3##NM_001829|CLCN3|1182|chloride channel 3##NM_173872|CLCN3|1182|chloride channel 3	0.0	
chr4	38107349	38107438	reg1032903.p2	3.507	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-128376	+	AF095288 BC069114 BC069400 NM_006607	-145338	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-214604	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	558433	+	AF289565 TSC_hg19_v1_chr4_-_38666549	559096	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	677206	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr5	138624017	138624142	reg1033675.p1	3.507	+	TSC_hg19_v1_chr5_+_138609789 BC036498 CR749625 AK293952 AJ224166 AJ224167 AJ224168 AJ224169 AJ224170	-14275	+	AK307872 NM_001194954 NM_199189 TSC_hg19_v1_chr5_+_138609537	-14591	+	TSC_hg19_v1_chr5_-_138534058 AJ299442 AK074624 NM_001037633 NM_022464	-90033	-	TSC_hg19_v1_chr5_+_138629336 NM_018834	5260	+	TSC_hg19_v1_chr5_+_138629428 BX537365 AK316420 CR749210 NM_001194955 NM_001194956 AK299399	5380	+	TSC_hg19_v1_chr5_+_138629669 AK057645 AB018266	5596	+	BC036498|MATR3|9782|matrin 3##CR749625|MATR3|9782|matrin 3##AK293952|MATR3|9782|matrin 3##AJ224166|MATR3|9782|matrin 3##AJ224167|SNHG4|724102|small nucleolar RNA host gene 4 (non-protein coding)##AJ224168|SNHG4|724102|small nucleolar RNA host gene 4 (non-protein coding)##AJ224169|MATR3|9782|matrin 3##AJ224170|SNHG4|724102|small nucleolar RNA host gene 4 (non-protein coding)##AK307872|MATR3|9782|matrin 3##NM_001194954|MATR3|9782|matrin 3##NM_199189|MATR3|9782|matrin 3##AJ299442|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK074624|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_001037633|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_022464|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_018834|MATR3|9782|matrin 3##BX537365|MATR3|9782|matrin 3##AK316420|MATR3|9782|matrin 3##CR749210|MATR3|9782|matrin 3##NM_001194955|MATR3|9782|matrin 3##NM_001194956|MATR3|9782|matrin 3##AK299399|MATR3|9782|matrin 3##AK057645|MATR3|9782|matrin 3##AB018266|MATR3|9782|matrin 3	0.942512	CTCF.p2:-7:0.943
chr6	163683220	163683312	reg1039841.p1	3.507	+	AF546872 NM_001080379 BC030642	-534250	+	TSC_hg19_v1_chr6_-_163148808 NM_004562 NM_013987 NM_013988	-534450	-	TSC_hg19_v1_chr6_-_163148799 AB009973	-534468	-	TSC_hg19_v1_chr6_+_163835675 AB067798 AB067799 AB067800 AB067801 NM_006775 NM_206853 NM_206854 NM_206855	152406	+	TSC_hg19_v1_chr6_+_163835795 AF272349	152524	+	BC019917 TSC_hg19_v1_chr6_+_163836201 AB590716 DQ323998 EU832828 GQ129383 AY780788 AK027309	152966	+	AF546872|PACRG|135138|PARK2 co-regulated##NM_001080379|PACRG|135138|PARK2 co-regulated##BC030642|PACRG|135138|PARK2 co-regulated##NM_004562|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##NM_013987|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##NM_013988|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB009973|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##AB067798|QKI|9444|QKI, KH domain containing, RNA binding##AB067799|QKI|9444|QKI, KH domain containing, RNA binding##AB067800|QKI|9444|QKI, KH domain containing, RNA binding##AB067801|QKI|9444|QKI, KH domain containing, RNA binding##NM_006775|QKI|9444|QKI, KH domain containing, RNA binding##NM_206853|QKI|9444|QKI, KH domain containing, RNA binding##NM_206854|QKI|9444|QKI, KH domain containing, RNA binding##NM_206855|QKI|9444|QKI, KH domain containing, RNA binding##AF272349|QKI|9444|QKI, KH domain containing, RNA binding##BC019917|QKI|9444|QKI, KH domain containing, RNA binding##DQ323998|QKI|9444|QKI, KH domain containing, RNA binding##EU832828|QKI|9444|QKI, KH domain containing, RNA binding##GQ129383|QKI|9444|QKI, KH domain containing, RNA binding##AY780788|QKI|9444|QKI, KH domain containing, RNA binding##AK027309|QKI|9444|QKI, KH domain containing, RNA binding	0.0	
chr11	60849280	60849411	reg1038000.p1	3.506	+	NM_006725 TSC_hg19_v1_chr11_+_60739236 AK128419 AK312749 BC078669 BC033755 X60992 AK292704 DQ786329 DQ786330 U66142 U66145 U66146	-110120	+	BC037974 BC025710 AF135600 AB020598 NM_016582	-130159	-	TSC_hg19_v1_chr11_+_60691945 NM_017870 NM_178031 AK000546 BC114569 BC032059	-157410	+	NM_014207 AY541703 TSC_hg19_v1_chr11_+_60869960 AK292698 X04391 BC027901 DQ892077 DQ895270	20634	+	BC141827 BC142702 AK097326 TSC_hg19_v1_chr11_-_60928910 NM_017966 AL834261 AK302384	79585	-	NM_001079807 AK301286 AK301293 AK301305 AK312941 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	121663	+	NM_006725|CD6|923|CD6 molecule##AK128419|CD6|923|CD6 molecule##AK312749|CD6|923|CD6 molecule##BC078669|CD6|923|CD6 molecule##BC033755|CD6|923|CD6 molecule##X60992|CD6|923|CD6 molecule##AK292704|CD6|923|CD6 molecule##DQ786329|CD6|923|CD6 molecule##DQ786330|CD6|923|CD6 molecule##U66142|CD6|923|CD6 molecule##U66145|CD6|923|CD6 molecule##U66146|CD6|923|CD6 molecule##BC037974|SLC15A3|51296|solute carrier family 15, member 3##BC025710|SLC15A3|51296|solute carrier family 15, member 3##AF135600|SLC15A3|51296|solute carrier family 15, member 3##AB020598|SLC15A3|51296|solute carrier family 15, member 3##NM_016582|SLC15A3|51296|solute carrier family 15, member 3##NM_017870|TMEM132A|54972|transmembrane protein 132A##NM_178031|TMEM132A|54972|transmembrane protein 132A##AK000546|TMEM132A|54972|transmembrane protein 132A##BC114569|TMEM132A|54972|transmembrane protein 132A##BC032059|TMEM132A|54972|transmembrane protein 132A##NM_014207|CD5|921|CD5 molecule##AY541703|CD5|921|CD5 molecule##AK292698|CD5|921|CD5 molecule##X04391|CD5|921|CD5 molecule##BC027901|CD5|921|CD5 molecule##DQ892077|CD5|921|CD5 molecule##DQ895270|CD5|921|CD5 molecule##BC141827|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##BC142702|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK097326|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_017966|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AL834261|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK302384|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_001079807|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301286|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301293|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)	0.0	
chr12	51487911	51488068	reg1042795.p1	3.506	+	TSC_hg19_v1_chr12_-_51477380 AJ298133 NM_030809	-10613	-	BC017221 TSC_hg19_v1_chr12_-_51477184 AK313080	-10803	-	NM_001243689 NM_015416 AF329277 AK301955 TSC_hg19_v1_chr12_+_51442109 AF195651 AK000639 AK304707 AK315119 AK127540 AK301898 AK225836 BC064943 AK057866 AF315598 AY259835 AY259836 CU687972	-45878	+	TSC_hg19_v1_chr12_-_51566577 M84810 AK291264 AK308087	78578	-	TSC_hg19_v1_chr12_-_51566607 BC003634	78642	-	TSC_hg19_v1_chr12_-_51566921 U03494 NM_001173452 NM_001173453 NM_005653	78917	-	AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##BC017221|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##AK313080|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##NM_001243689|LETMD1|25875|LETM1 domain containing 1##NM_015416|LETMD1|25875|LETM1 domain containing 1##AF329277|LETMD1|25875|LETM1 domain containing 1##AK301955|LETMD1|25875|LETM1 domain containing 1##AF195651|LETMD1|25875|LETM1 domain containing 1##AK000639|LETMD1|25875|LETM1 domain containing 1##AK304707|LETMD1|25875|LETM1 domain containing 1##AK315119|LETMD1|25875|LETM1 domain containing 1##AK127540|LETMD1|25875|LETM1 domain containing 1##AK301898|LETMD1|25875|LETM1 domain containing 1##AK225836|LETMD1|25875|LETM1 domain containing 1##BC064943|LETMD1|25875|LETM1 domain containing 1##AK057866|LETMD1|25875|LETM1 domain containing 1##AF315598|LETMD1|25875|LETM1 domain containing 1##AY259835|LETMD1|25875|LETM1 domain containing 1##AY259836|LETMD1|25875|LETM1 domain containing 1##M84810|TFCP2|7024|transcription factor CP2##AK291264|TFCP2|7024|transcription factor CP2##AK308087|TFCP2|7024|transcription factor CP2##BC003634|TFCP2|7024|transcription factor CP2##U03494|TFCP2|7024|transcription factor CP2##NM_001173452|TFCP2|7024|transcription factor CP2##NM_001173453|TFCP2|7024|transcription factor CP2##NM_005653|TFCP2|7024|transcription factor CP2	0.0	
chr12	72033448	72033554	reg1041002.p1	3.506	+	TSC_hg19_v1_chr12_+_71833761 AK075399 AF062006 FN820440 NM_003667 BC096324 BC096325 BC096326 BC099650 AF061444	-199691	+	TSC_hg19_v1_chr12_+_71833577 AK294985 AK315133	-199951	+	BC005246 NM_004616	-481723	-	AB385347 CU677389 TSC_hg19_v1_chr12_-_72057432	23909	-	TSC_hg19_v1_chr12_-_72057617 AB011118 BC073843 BC064336 BX647709 BC015679	24097	-	TSC_hg19_v1_chr12_-_72057679 NM_144982	24211	-	AK075399|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AF062006|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##FN820440|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##NM_003667|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096324|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096325|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC096326|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC099650|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AF061444|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AK294985|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##AK315133|LGR5|8549|leucine-rich repeat containing G protein-coupled receptor 5##BC005246|TSPAN8|7103|tetraspanin 8##NM_004616|TSPAN8|7103|tetraspanin 8##AB011118|ZFC3H1|196441|zinc finger, C3H1-type containing##BC073843|ZFC3H1|196441|zinc finger, C3H1-type containing##BC064336|ZFC3H1|196441|zinc finger, C3H1-type containing##BX647709|ZFC3H1|196441|zinc finger, C3H1-type containing##BC015679|ZFC3H1|196441|zinc finger, C3H1-type containing##NM_144982|ZFC3H1|196441|zinc finger, C3H1-type containing	0.012356	
chr13	30800368	30800549	reg1041640.p2	3.506	+	TSC_hg19_v1_chr13_-_30424811 NM_007106	-375617	-	TSC_hg19_v1_chr13_-_30424719 AK056580	-375756	-	BC059385 BC044582 TSC_hg19_v1_chr13_-_30424481	-376052	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	80693	-	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	81111	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	239535	-	NM_007106|UBL3|5412|ubiquitin-like 3##AK056580|UBL3|5412|ubiquitin-like 3##BC059385|UBL3|5412|ubiquitin-like 3##BC044582|UBL3|5412|ubiquitin-like 3##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1	0.0	
chr14	106025859	106025935	reg1007485.p2	3.506	+	TSC_hg19_v1_chr14_+_105992939 BC004221 NM_025268	-32956	+	TSC_hg19_v1_chr14_+_105957582 NM_001134875 NM_001134876 BX248283 BX248074 BC016028	-68261	+	BX248038 NM_001134877	-69378	+	TSC_hg19_v1_chr14_-_106092257 AJ294733 L13487	66439	-	BC040042 TSC_hg19_v1_chr14_-_106110945	85026	-	TSC_hg19_v1_chr14_-_106111114 AJ294731	85219	-	BC004221|TMEM121|80757|transmembrane protein 121##NM_025268|TMEM121|80757|transmembrane protein 121##NM_001134875|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134876|C14orf80|283643|chromosome 14 open reading frame 80##BX248283|C14orf80|283643|chromosome 14 open reading frame 80##BX248074|C14orf80|283643|chromosome 14 open reading frame 80##BC016028|C14orf80|283643|chromosome 14 open reading frame 80##BX248038|C14orf80|283643|chromosome 14 open reading frame 80##NM_001134877|C14orf80|283643|chromosome 14 open reading frame 80##AJ294733|IGHG4|3503|immunoglobulin heavy constant gamma 4 (G4m marker)##BC040042|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)##AJ294731|IGHG2|3501|immunoglobulin heavy constant gamma 2 (G2m marker)	0.0	
chr15	64799770	64799904	reg1037672.p2	3.506	+	NM_015042	-8219	+	TSC_hg19_v1_chr15_+_64752786 BC142647	-46978	+	NM_016213 TSC_hg19_v1_chr15_+_64680041 BC012448 AK314319 AB464298 EU446746	-119801	+	AB056456 TSC_hg19_v1_chr15_+_64885153	85316	+	BC119629 BC119630 BC148316 BC127630 TSC_hg19_v1_chr15_-_64995360 BC127631 AF242520 AF242521	195523	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	195565	-	NM_015042|ZNF609|23060|zinc finger protein 609##BC142647|ZNF609|23060|zinc finger protein 609##NM_016213|TRIP4|9325|thyroid hormone receptor interactor 4##BC012448|TRIP4|9325|thyroid hormone receptor interactor 4##AK314319|TRIP4|9325|thyroid hormone receptor interactor 4##EU446746|TRIP4|9325|thyroid hormone receptor interactor 4##BC119629|OAZ2|4947|ornithine decarboxylase antizyme 2##BC119630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC148316|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127630|OAZ2|4947|ornithine decarboxylase antizyme 2##BC127631|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242520|OAZ2|4947|ornithine decarboxylase antizyme 2##AF242521|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2	0.0	
chr17	1640061	1640219	reg1028430.p2	3.506	+	AK300986 TSC_hg19_v1_chr17_+_1633784	-6371	+	TSC_hg19_v1_chr17_+_1631333 AL834379 BC092513	-8775	+	TSC_hg19_v1_chr17_+_1628049 NM_001163809	-12062	+	NM_000934 NM_001165921 TSC_hg19_v1_chr17_+_1646130	5989	+	TSC_hg19_v1_chr17_+_1646164 AK303763	6018	+	TSC_hg19_v1_chr17_+_1646309 BC031592 NM_001165920	6164	+	AK300986|WDR81|124997|WD repeat domain 81##AL834379|WDR81|124997|WD repeat domain 81##BC092513|WDR81|124997|WD repeat domain 81##NM_001163809|WDR81|124997|WD repeat domain 81##NM_000934|SERPINF2|5345|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2##NM_001165921|SERPINF2|5345|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2##AK303763|SERPINF2|5345|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2##BC031592|SERPINF2|5345|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2##NM_001165920|SERPINF2|5345|serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2	0.0	
chr17	2295596	2295737	reg1038051.p1	3.506	+	TSC_hg19_v1_chr17_+_2240796 NM_014853 AB007857 NM_001098509 BC039204 AK294955 AB275762 AB385325 AB449878 AK304263	-54764	+	NM_018128 AB037822	-54928	-	AB463326 TSC_hg19_v1_chr17_-_2239749 AK026565	-55922	-	X96401 NM_020310 TSC_hg19_v1_chr17_-_2304355 AK291596	8650	-	TSC_hg19_v1_chr17_-_2415189 BX647255 AK294547 BC050603 BC001213 AL832612 AK027410 AK296464 NM_024086	119479	-	TSC_hg19_v1_chr17_+_2496944 NM_000430 L13386	201304	+	NM_014853|SGSM2|9905|small G protein signaling modulator 2##AB007857|SGSM2|9905|small G protein signaling modulator 2##NM_001098509|SGSM2|9905|small G protein signaling modulator 2##BC039204|SGSM2|9905|small G protein signaling modulator 2##AK294955|SGSM2|9905|small G protein signaling modulator 2##AB275762|SGSM2|9905|small G protein signaling modulator 2##AB449878|SGSM2|9905|small G protein signaling modulator 2##AK304263|SGSM2|9905|small G protein signaling modulator 2##NM_018128|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AB037822|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##AK026565|TSR1|55720|TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)##X96401|MNT|4335|MAX binding protein##NM_020310|MNT|4335|MAX binding protein##AK291596|MNT|4335|MAX binding protein##BX647255|METTL16|79066|methyltransferase like 16##AK294547|METTL16|79066|methyltransferase like 16##BC050603|METTL16|79066|methyltransferase like 16##BC001213|METTL16|79066|methyltransferase like 16##AL832612|METTL16|79066|methyltransferase like 16##AK027410|METTL16|79066|methyltransferase like 16##AK296464|METTL16|79066|methyltransferase like 16##NM_024086|METTL16|79066|methyltransferase like 16##NM_000430|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)##L13386|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	0.030909	
chr17	46184759	46184840	reg1033688.p2	3.506	+	TSC_hg19_v1_chr17_-_46178825 U35451 BC002609 AK312615 NM_001127228	-5978	-	NM_006807 TSC_hg19_v1_chr17_-_46178605	-6216	-	BX647976 TSC_hg19_v1_chr17_+_46126143	-58658	+	AK091852 AK296095 AK316374 AK023932 NM_152244 AK296569 AF121861 NM_013323 TSC_hg19_v1_chr17_+_46185061	186	+	TSC_hg19_v1_chr17_+_46185128 BC103721 AK298551	353	+	AB590503 CU690516 Y11215 BC047870 TSC_hg19_v1_chr17_-_46507592 AK290818 NM_001075099 NM_003726	322739	-	U35451|CBX1|10951|chromobox homolog 1##BC002609|CBX1|10951|chromobox homolog 1##AK312615|CBX1|10951|chromobox homolog 1##NM_001127228|CBX1|10951|chromobox homolog 1##NM_006807|CBX1|10951|chromobox homolog 1##BX647976|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AK091852|SNX11|29916|sorting nexin 11##AK296095|SNX11|29916|sorting nexin 11##AK316374|SNX11|29916|sorting nexin 11##AK023932|SNX11|29916|sorting nexin 11##NM_152244|SNX11|29916|sorting nexin 11##AK296569|SNX11|29916|sorting nexin 11##AF121861|SNX11|29916|sorting nexin 11##NM_013323|SNX11|29916|sorting nexin 11##BC103721|SNX11|29916|sorting nexin 11##AK298551|SNX11|29916|sorting nexin 11##Y11215|SKAP1|8631|src kinase associated phosphoprotein 1##BC047870|SKAP1|8631|src kinase associated phosphoprotein 1##AK290818|SKAP1|8631|src kinase associated phosphoprotein 1##NM_001075099|SKAP1|8631|src kinase associated phosphoprotein 1##NM_003726|SKAP1|8631|src kinase associated phosphoprotein 1	0.025145	
chr19	53324727	53324812	reg1040435.p1	3.506	+	BX640933 AK131231 NM_198457	-34745	-	BC028590 AK091389 AX746954 NM_001161501 NM_001161499 NM_001161500	-86471	-	AK097434 NM_030972	-91635	-	CR933598 AK304704 BC070146 AK293074 NM_006969	133	-	TSC_hg19_v1_chr19_-_53360854 AX721127 CR936599 AK292449 CR936695 AK289841 AY442330 AY442331 NM_001008801 NM_199132	36107	-	NM_207333	69829	-	BX640933|ZNF600|162966|zinc finger protein 600##AK131231|ZNF600|162966|zinc finger protein 600##NM_198457|ZNF600|162966|zinc finger protein 600##BC028590|ZNF611|81856|zinc finger protein 611##AK091389|ZNF611|81856|zinc finger protein 611##NM_001161501|ZNF611|81856|zinc finger protein 611##NM_001161499|ZNF611|81856|zinc finger protein 611##NM_001161500|ZNF611|81856|zinc finger protein 611##AK097434|ZNF611|81856|zinc finger protein 611##NM_030972|ZNF611|81856|zinc finger protein 611##CR933598|ZNF28|7576|zinc finger protein 28##AK304704|ZNF28|7576|zinc finger protein 28##BC070146|ZNF28|7576|zinc finger protein 28##AK293074|ZNF28|7576|zinc finger protein 28##NM_006969|ZNF28|7576|zinc finger protein 28##CR936599|ZNF468|90333|zinc finger protein 468##AK292449|ZNF468|90333|zinc finger protein 468##CR936695|ZNF468|90333|zinc finger protein 468##AK289841|ZNF468|90333|zinc finger protein 468##AY442330|ZNF468|90333|zinc finger protein 468##AY442331|ZNF468|90333|zinc finger protein 468##NM_001008801|ZNF468|90333|zinc finger protein 468##NM_199132|ZNF468|90333|zinc finger protein 468##NM_207333|ZNF320|162967|zinc finger protein 320	0.0	
chr2	106531739	106531870	reg1033406.p1	3.506	+	NM_001004720 BC000103	-63543	+	TSC_hg19_v1_chr2_+_106432941 AF047487 BC007195	-98829	+	TSC_hg19_v1_chr2_+_106361534 NM_001004722 NM_003581	-170261	+	BC021742 AF325503 NM_032411 TSC_hg19_v1_chr2_+_106682146 AY358601 DQ892412 DQ895626	150360	+	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	278941	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	278954	-	NM_001004720|NCK2|8440|NCK adaptor protein 2##BC000103|NCK2|8440|NCK adaptor protein 2##AF047487|NCK2|8440|NCK adaptor protein 2##BC007195|NCK2|8440|NCK adaptor protein 2##NM_001004722|NCK2|8440|NCK adaptor protein 2##NM_003581|NCK2|8440|NCK adaptor protein 2##BC021742|C2orf40|84417|chromosome 2 open reading frame 40##AF325503|C2orf40|84417|chromosome 2 open reading frame 40##NM_032411|C2orf40|84417|chromosome 2 open reading frame 40##AY358601|C2orf40|84417|chromosome 2 open reading frame 40##DQ892412|C2orf40|84417|chromosome 2 open reading frame 40##DQ895626|C2orf40|84417|chromosome 2 open reading frame 40##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1	0.0	
chr2	131174424	131174507	reg1032838.p1	3.506	+	NM_001142370 NM_014369 TSC_hg19_v1_chr2_+_131113598 BC031076 BC024280 BC041562 BC052800 X79568 AK303804 CU690934	-60815	+	TSC_hg19_v1_chr2_+_131100487 BC010042 NM_033416	-73979	+	TSC_hg19_v1_chr2_+_131100469 AK289878 AK292345 AK312808	-73997	+	NM_001079530 AK315326 AK290094 NM_032545 BC146897 BC110080 BC069508 BC074825 BC074826 AF312769	104373	+	CU686866 AF312769 BC074825 BC074826 BC069508 BC110080 BC146897 NM_032545 AK290094 AK315326 NM_001079530	182589	-	BC105013 BC105041 NM_207364 AY569570 AY280965	312218	+	NM_001142370|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##NM_014369|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC031076|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC024280|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC041562|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC052800|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##X79568|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##AK303804|PTPN18|26469|protein tyrosine phosphatase, non-receptor type 18 (brain-derived)##BC010042|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_033416|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK289878|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK292345|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##AK312808|IMP4|92856|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)##NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##AF312769|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074825|CFC1|55997|cripto, FRL-1, cryptic family 1##BC074826|CFC1|55997|cripto, FRL-1, cryptic family 1##BC069508|CFC1|55997|cripto, FRL-1, cryptic family 1##BC110080|CFC1|55997|cripto, FRL-1, cryptic family 1##BC146897|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_032545|CFC1|55997|cripto, FRL-1, cryptic family 1##AK290094|CFC1|55997|cripto, FRL-1, cryptic family 1##AK315326|CFC1|55997|cripto, FRL-1, cryptic family 1##NM_001079530|CFC1B|653275|cripto, FRL-1, cryptic family 1B##BC105013|GPR148|344561|G protein-coupled receptor 148##BC105041|GPR148|344561|G protein-coupled receptor 148##NM_207364|GPR148|344561|G protein-coupled receptor 148##AY569570|GPR148|344561|G protein-coupled receptor 148##AY280965|GPR148|344561|G protein-coupled receptor 148	0.788167	CTCF.p2:-5:0.788
chr2	191031527	191031594	reg1045635.p1	3.506	+	NM_001042520	-16589	+	NM_001042521	-29075	+	AF019627 AB527883 EU446953 BC074757 AK291524 AF104922 NM_005259	-104173	-	NM_001042519 BC005083 NM_032321 AK313395	14080	+	TSC_hg19_v1_chr2_-_191184553 AK222979 AK223023 AK308042 BC067822 AK313651 U66669 BC005190	152979	-	NM_014362 NM_198047	153210	-	NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042521|C2orf88|84281|chromosome 2 open reading frame 88##AF019627|MSTN|2660|myostatin##EU446953|MSTN|2660|myostatin##BC074757|MSTN|2660|myostatin##AK291524|MSTN|2660|myostatin##AF104922|MSTN|2660|myostatin##NM_005259|MSTN|2660|myostatin##NM_001042519|C2orf88|84281|chromosome 2 open reading frame 88##BC005083|C2orf88|84281|chromosome 2 open reading frame 88##NM_032321|C2orf88|84281|chromosome 2 open reading frame 88##AK313395|C2orf88|84281|chromosome 2 open reading frame 88##AK222979|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK223023|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK308042|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##BC067822|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK313651|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##U66669|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##BC005190|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_014362|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_198047|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase	0.0	
chr2	96192116	96192237	reg1038830.p1	3.506	+	NM_001164464	-41698	-	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	-123697	+	DQ148486 NM_001034914	-179409	+	BC015353 NM_138800	65589	+	TSC_hg19_v1_chr2_-_96482383 BC117383 BC126153 AK057596	290269	-	TSC_hg19_v1_chr2_-_96657677 AK302433	465446	-	NM_001164464|TRIM43B|653192|tripartite motif containing 43B##AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##DQ148486|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_001034914|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC015353|TRIM43|129868|tripartite motif containing 43##NM_138800|TRIM43|129868|tripartite motif containing 43##AK057596|LINC00342|150759|long intergenic non-protein coding RNA 342##AK302433|ANKRD36C|400986|ankyrin repeat domain 36C	0.0	
chr3	99364307	99364411	reg1024382.p2	3.506	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	-6909	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-743867	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-912772	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	172386	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	230632	-	BC017987 NM_001042459 NM_182909 AF329092 AX776292	468993	-	AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like##BC017987|FILIP1L|11259|filamin A interacting protein 1-like##NM_001042459|FILIP1L|11259|filamin A interacting protein 1-like##NM_182909|FILIP1L|11259|filamin A interacting protein 1-like##AF329092|FILIP1L|11259|filamin A interacting protein 1-like##AX776292|FILIP1L|11259|filamin A interacting protein 1-like	0.991068	CTCF.p2:21:0.991
chr4	25971995	25972163	reg1035295.p2	3.506	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-56215	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-107525	-	NM_001177999 AK314514	-313989	+	L07875 BC020780 NM_005349 NM_203283	349240	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	350230	+	TSC_hg19_v1_chr4_+_26322635 AK302230	350557	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.0	
chr6	34393693	34393778	reg1028752.p1	3.506	+	TSC_hg19_v1_chr6_-_34360442 NM_006703	-33284	-	TSC_hg19_v1_chr6_-_34360425 BC007727	-33315	-	TSC_hg19_v1_chr6_-_34360360 AK313440	-33400	-	TSC_hg19_v1_chr6_-_34393847 NM_001203245 U14972 BC070235 BC001032 BC071946 AK311797 NM_001014 NM_001202470 NM_001204091	114	-	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	40169	+	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	88919	+	NM_006703|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##BC007727|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##AK313440|NUDT3|11165|nudix (nucleoside diphosphate linked moiety X)-type motif 3##NM_001203245|RPS10|6204|ribosomal protein S10##U14972|RPS10|6204|ribosomal protein S10##BC070235|RPS10|6204|ribosomal protein S10##BC001032|RPS10|6204|ribosomal protein S10##BC071946|RPS10|6204|ribosomal protein S10##AK311797|RPS10|6204|ribosomal protein S10##NM_001014|RPS10|6204|ribosomal protein S10##NM_001202470|RPS10-NUDT3|100529239|RPS10-NUDT3 readthrough##NM_001204091|RPS10|6204|ribosomal protein S10##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1	0.0	
chr8	73422393	73422490	reg1039362.p1	3.506	+	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	-434607	-	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-665733	-	AF060154 TSC_hg19_v1_chr8_-_72756646	-665813	-	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	27202	+	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	498671	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	583001	-	NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##AF060154|MSC|9242|musculin##AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84	0.99585	CTCF.p2:-18:0.996
chr10	104163396	104163509	reg1016488.p1	3.505	+	NM_002502 X61498 X61499 TSC_hg19_v1_chr10_+_104155501 AK292654	-7981	+	NM_001077493 TSC_hg19_v1_chr10_+_104154290 BC002844 NM_001077494 S76638	-9162	+	TSC_hg19_v1_chr10_+_104005308 AF068755 D87435 BC117681 BC117682	-158085	+	TSC_hg19_v1_chr10_-_104178575 BC037332	15120	-	AB095931 NM_002779 TSC_hg19_v1_chr10_-_104178917	15456	-	BC039259 TSC_hg19_v1_chr10_-_104179472 AF452641	16019	-	NM_002502|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61498|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##X61499|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##AK292654|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_001077493|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##BC002844|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##NM_001077494|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##S76638|NFKB2|4791|nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)##AF068755|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##D87435|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117681|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC117682|GBF1|8729|golgi brefeldin A resistant guanine nucleotide exchange factor 1##BC037332|PSD|5662|pleckstrin and Sec7 domain containing##AB095931|PSD|5662|pleckstrin and Sec7 domain containing##NM_002779|PSD|5662|pleckstrin and Sec7 domain containing##BC039259|PSD|5662|pleckstrin and Sec7 domain containing##AF452641|PSD|5662|pleckstrin and Sec7 domain containing	0.0	
chr11	130895946	130896033	reg1036842.p2	3.505	+	TSC_hg19_v1_chr11_-_130786375 NM_014758 AK292457	-109601	-	TSC_hg19_v1_chr11_-_130786371 AK316505 AK304809 AK309202 BC031620 AK316414 D87443	-109644	-	TSC_hg19_v1_chr11_+_130318539 AJ315733 BC109114 NM_139055	-577327	+	NM_001048209 AK315964 TSC_hg19_v1_chr11_+_131240520 AK293487 AY358331	344480	+	TSC_hg19_v1_chr11_+_131780556 NM_001144058 NM_001144059 NM_016522	884635	+	TSC_hg19_v1_chr11_+_131781303 EF043567 BC050716 CU690778	885350	+	NM_014758|SNX19|399979|sorting nexin 19##AK292457|SNX19|399979|sorting nexin 19##AK316505|SNX19|399979|sorting nexin 19##AK304809|SNX19|399979|sorting nexin 19##AK309202|SNX19|399979|sorting nexin 19##BC031620|SNX19|399979|sorting nexin 19##AK316414|SNX19|399979|sorting nexin 19##D87443|SNX19|399979|sorting nexin 19##AJ315733|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##BC109114|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_139055|ADAMTS15|170689|ADAM metallopeptidase with thrombospondin type 1 motif, 15##NM_001048209|NTM|50863|neurotrimin##AK315964|NTM|50863|neurotrimin##AK293487|NTM|50863|neurotrimin##AY358331|NTM|50863|neurotrimin##NM_001144058|NTM|50863|neurotrimin##NM_001144059|NTM|50863|neurotrimin##NM_016522|NTM|50863|neurotrimin##EF043567|NTM|50863|neurotrimin##BC050716|NTM|50863|neurotrimin	0.0	
chr11	45105185	45105263	reg1040013.p1	3.505	+	TSC_hg19_v1_chr11_-_44972435 AK292837 AK096176 AK056379 AK026607 AK054815 NM_001076787 NM_006034	-132807	-	TSC_hg19_v1_chr11_-_44956087 AF010315	-149117	-	NM_130783	-319249	+	AF275818 NM_020229	10339	+	AK308841 AB384203 AM393283 BC093830 AK291009 BC093832 AL512743 AB037848 NM_001247987 NM_020826	202526	-	TSC_hg19_v1_chr11_-_45687157 AK311168 BC022567 NM_003654	581960	-	AK292837|TP53I11|9537|tumor protein p53 inducible protein 11##AK096176|TP53I11|9537|tumor protein p53 inducible protein 11##AK056379|TP53I11|9537|tumor protein p53 inducible protein 11##AK026607|TP53I11|9537|tumor protein p53 inducible protein 11##AK054815|TP53I11|9537|tumor protein p53 inducible protein 11##NM_001076787|TP53I11|9537|tumor protein p53 inducible protein 11##NM_006034|TP53I11|9537|tumor protein p53 inducible protein 11##AF010315|TP53I11|9537|tumor protein p53 inducible protein 11##NM_130783|TSPAN18|90139|tetraspanin 18##AF275818|PRDM11|56981|PR domain containing 11##NM_020229|PRDM11|56981|PR domain containing 11##AK308841|SYT13|57586|synaptotagmin XIII##AM393283|SYT13|57586|synaptotagmin XIII##BC093830|SYT13|57586|synaptotagmin XIII##AK291009|SYT13|57586|synaptotagmin XIII##BC093832|SYT13|57586|synaptotagmin XIII##AL512743|SYT13|57586|synaptotagmin XIII##AB037848|SYT13|57586|synaptotagmin XIII##NM_001247987|SYT13|57586|synaptotagmin XIII##NM_020826|SYT13|57586|synaptotagmin XIII##AK311168|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##BC022567|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1##NM_003654|CHST1|8534|carbohydrate (keratan sulfate Gal-6) sulfotransferase 1	0.144732	
chr12	104852307	104852477	reg1034787.p1	3.505	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-1305	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-1584	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-1621	+	TSC_hg19_v1_chr12_+_105153261 AF131762	300885	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	469871	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	527698	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.035324	
chr14	59642352	59642512	reg1029431.p2	3.505	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-537686	+	AK302579 NM_001244193 AK310356 AK302718	-736006	+	NM_014749 BC066647	-747701	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	12972	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	289490	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	289624	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.021314	
chr15	96407844	96407966	reg1032472.p2	3.505	+	TSC_hg19_v1_chr15_-_95870310 BC040875	-537586	-	NM_001159644 BC025708 BC111024 AK002037	-1508596	+	NM_001159643 NM_018349 AY656717 BC131527	-1566444	+	BC106083 NM_001145155 FM208183	461256	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	466072	+	AK316086 NM_001145156	467888	+	BC040875|LOC400456|400456|uncharacterized LOC400456##NM_001159644|MCTP2|55784|multiple C2 domains, transmembrane 2##BC025708|MCTP2|55784|multiple C2 domains, transmembrane 2##BC111024|MCTP2|55784|multiple C2 domains, transmembrane 2##AK002037|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_001159643|MCTP2|55784|multiple C2 domains, transmembrane 2##NM_018349|MCTP2|55784|multiple C2 domains, transmembrane 2##AY656717|MCTP2|55784|multiple C2 domains, transmembrane 2##BC131527|MCTP2|55784|multiple C2 domains, transmembrane 2##BC106083|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145155|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##FM208183|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2	0.0	
chr1	6269391	6269549	reg1041797.p1	3.505	+	AK056658 TSC_hg19_v1_chr1_+_6268938 AK294223 BC128237	-473	+	BC119780 TSC_hg19_v1_chr1_+_6266175 NM_207396	-3306	+	TSC_hg19_v1_chr1_-_6259655 CR456873 BC046108 BC058887 AK097075 AK311749 D17652 BC066314 BC035566 NM_000983	-9817	-	TSC_hg19_v1_chr1_-_6295985 CR541671 CR541711 AB590586	26507	-	TSC_hg19_v1_chr1_-_6295993 BC028168 AF064084 AK092890 BC017037	26540	-	TSC_hg19_v1_chr1_-_6296121 NM_012405	26638	-	AK056658|RNF207|388591|ring finger protein 207##AK294223|RNF207|388591|ring finger protein 207##BC128237|RNF207|388591|ring finger protein 207##BC119780|RNF207|388591|ring finger protein 207##NM_207396|RNF207|388591|ring finger protein 207##CR456873|RPL22|6146|ribosomal protein L22##BC058887|RPL22|6146|ribosomal protein L22##AK097075|RPL22|6146|ribosomal protein L22##AK311749|RPL22|6146|ribosomal protein L22##D17652|RPL22|6146|ribosomal protein L22##BC066314|RPL22|6146|ribosomal protein L22##BC035566|RPL22|6146|ribosomal protein L22##NM_000983|RPL22|6146|ribosomal protein L22##CR541671|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##CR541711|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##BC028168|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##AF064084|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##AK092890|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##BC017037|ICMT|23463|isoprenylcysteine carboxyl methyltransferase##NM_012405|ICMT|23463|isoprenylcysteine carboxyl methyltransferase	0.0	
chr16	56827617	56827743	reg1041517.p1	3.505	+	AK294176 NM_001242796	-10291	+	NM_001242795 AK056637 TSC_hg19_v1_chr16_+_56815740	-11945	+	TSC_hg19_v1_chr16_+_56764089 D42085 AF086282 BC034346 AK292262	-63595	+	AK315298 NM_000339 NM_001126107 NM_001126108 AK223133 X91220 U44128 AB463268	71452	+	NM_001010989 NM_001010990 NM_014685	138067	+	AK302167 TSC_hg19_v1_chr16_+_56966053 AB034989 AK223233 AK291565 AK292088 AK304800 BC009739 DQ837586 AF055001 D14695 BC000086 BC008320 BC032673 DQ891867 EU176642 CR457116 AF055003	138461	+	AK294176|NUP93|9688|nucleoporin 93kDa##NM_001242796|NUP93|9688|nucleoporin 93kDa##NM_001242795|NUP93|9688|nucleoporin 93kDa##AK056637|NUP93|9688|nucleoporin 93kDa##D42085|NUP93|9688|nucleoporin 93kDa##AF086282|NUP93|9688|nucleoporin 93kDa##BC034346|NUP93|9688|nucleoporin 93kDa##AK292262|NUP93|9688|nucleoporin 93kDa##AK315298|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_000339|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126107|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001126108|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##AK223133|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##X91220|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##U44128|SLC12A3|6559|solute carrier family 12 (sodium/chloride transporters), member 3##NM_001010989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_001010990|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##NM_014685|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK302167|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AB034989|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK223233|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK291565|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK292088|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AK304800|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC009739|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ837586|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055001|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##D14695|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC000086|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC008320|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##BC032673|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##DQ891867|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##EU176642|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##CR457116|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1##AF055003|HERPUD1|9709|homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	0.997935	CTCF.p2:-10:0.998
chr19	50860648	50860829	reg1006502.p2	3.505	+	BC085008 BC006149 BC111705 BC040958 BC053864 BC065203 BC032360 AF090387 AF098485 AF200344 AK300884 BC019048 AK310134 TSC_hg19_v1_chr19_-_50848025	-12746	-	AF055989 NM_004977	-28105	-	BC007877 TSC_hg19_v1_chr19_+_50796867	-63894	+	AF090386 DQ891993 DQ895183 CU676086 AF200345 BC029397 AK308013 AK314364 BC017842 AF098484 NM_004851	8165	-	TSC_hg19_v1_chr19_+_50879744 NM_007121 AK297978 BC047750 CR749648 U07132 BC074500 AK290855 BC033500	18989	+	AB209560 TSC_hg19_v1_chr19_+_50887563	26787	+	BC085008|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC006149|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC111705|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC040958|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC053864|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC065203|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC032360|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF090387|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF098485|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF200344|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK300884|NAPSB|256236|napsin B aspartic peptidase pseudogene##BC019048|NAPSB|256236|napsin B aspartic peptidase pseudogene##AK310134|NAPSB|256236|napsin B aspartic peptidase pseudogene##AF055989|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##NM_004977|KCNC3|3748|potassium voltage-gated channel, Shaw-related subfamily, member 3##BC007877|MYH14|79784|myosin, heavy chain 14, non-muscle##AF090386|NAPSA|9476|napsin A aspartic peptidase##DQ891993|NAPSA|9476|napsin A aspartic peptidase##DQ895183|NAPSA|9476|napsin A aspartic peptidase##AF200345|NAPSA|9476|napsin A aspartic peptidase##BC029397|NAPSA|9476|napsin A aspartic peptidase##AK308013|NAPSA|9476|napsin A aspartic peptidase##AK314364|NAPSA|9476|napsin A aspartic peptidase##BC017842|NAPSA|9476|napsin A aspartic peptidase##AF098484|NAPSA|9476|napsin A aspartic peptidase##NM_004851|NAPSA|9476|napsin A aspartic peptidase##NM_007121|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##AK297978|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##BC047750|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##CR749648|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##U07132|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##BC074500|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##AK290855|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##BC033500|NR1H2|7376|nuclear receptor subfamily 1, group H, member 2##AB209560|POLD1|5424|polymerase (DNA directed), delta 1, catalytic subunit 125kDa	0.0	
chr19	7272966	7273072	reg1033363.p1	3.505	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-173468	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-203304	+	AK315405 NM_001044387 NM_001044388 NM_024341	-203557	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	20941	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	186988	+	TSC_hg19_v1_chr19_+_7460061 AB011093	187058	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr20	10539459	10539627	reg1034293.p1	3.505	+	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-123567	+	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	-124704	-	AF221993 NM_018848	-126974	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	114661	-	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	115026	-	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1331906	+	BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3	0.0	
chr3	51976348	51976528	reg1010781.p2	3.505	+	TSC_hg19_v1_chr3_-_51975920 DQ895802 EU176364 BC023662 AJ001340 BC009879 NM_004704 BC001113 BC010048 BC021032 AK313696	-497	-	AK131018 BC029595 BC034228 NM_152397	-39078	-	NM_001145059	-66839	-	TSC_hg19_v1_chr3_+_51976389 NM_001003931 NM_005485 Y16836 AB208803 AY126341 AF083068 AB529017	50	+	TSC_hg19_v1_chr3_+_51977304 BC014260 CU676947	890	+	NM_080865 AB032600 BC026357	12924	+	DQ895802|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##EU176364|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC023662|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##AJ001340|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC009879|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##NM_004704|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC001113|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC010048|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##BC021032|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##AK313696|RRP9|9136|ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast)##AK131018|IQCF1|132141|IQ motif containing F1##BC029595|IQCF1|132141|IQ motif containing F1##BC034228|IQCF1|132141|IQ motif containing F1##NM_152397|IQCF1|132141|IQ motif containing F1##NM_001145059|IQCF5|389124|IQ motif containing F5##NM_001003931|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##NM_005485|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##Y16836|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##AB208803|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##AY126341|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##AF083068|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##BC014260|PARP3|10039|poly (ADP-ribose) polymerase family, member 3##NM_080865|GPR62|118442|G protein-coupled receptor 62##AB032600|GPR62|118442|G protein-coupled receptor 62##BC026357|GPR62|118442|G protein-coupled receptor 62	0.0	
chr9	86932642	86932727	reg1034537.p2	3.505	+	NM_024945 TSC_hg19_v1_chr9_+_86595689 BC039999 BC020606 AK022950 BC044571 BC053549 BC032494	-336975	+	TSC_hg19_v1_chr9_-_86595531 BC014980 AK291336 X72727 NM_002140 NM_031262	-337145	-	TSC_hg19_v1_chr9_-_86595168 NM_031263	-337509	-	BC093821 BC093823 AK310861 AK304406 AK314039 AK292849 NM_001199633	22950	-	AF305210 NM_022127	50728	-	TSC_hg19_v1_chr9_+_87283453 BC075804 NM_001018064 NM_006180 AB209118	350777	+	NM_024945|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC039999|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC020606|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##AK022950|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC044571|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC053549|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC032494|RMI1|80010|RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae)##BC014980|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##AK291336|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##X72727|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_002140|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_031262|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##NM_031263|HNRNPK|3190|heterogeneous nuclear ribonucleoprotein K##BC093821|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC093823|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK310861|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK304406|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK314039|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AK292849|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_001199633|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##AF305210|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##NM_022127|SLC28A3|64078|solute carrier family 28 (sodium-coupled nucleoside transporter), member 3##BC075804|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_001018064|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##NM_006180|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2##AB209118|NTRK2|4915|neurotrophic tyrosine kinase, receptor, type 2	0.59262	CTCF.p2:-3:0.593
chr10	114596098	114596194	reg1042794.p1	3.504	+	TSC_hg19_v1_chr10_-_114207307 AK308026	-388841	-	TSC_hg19_v1_chr10_+_114206991 BC017052 AK303646	-389135	+	TSC_hg19_v1_chr10_+_114206756 AK095476 NM_145206 BC064614	-389382	+	TSC_hg19_v1_chr10_+_114710005 AK225809 NM_001146274 NM_001146283 NM_001146284 NM_001146285 NM_001146286 NM_001198525 NM_001198526 NM_001198527 NM_001198528 NM_001198529 NM_001198530 NM_001198531 NM_030756 FJ010174 Y11306 AK315243 FJ010168 FJ010169 FJ010172 FJ010166 FJ010167 FJ010170 BC032656 FJ010171 AK299295 AB440195 AB451266 CR536574 HM352838 HM352839 HM352840 HM352841 HM352842 HM352843 HM352844 HM352845 HM352846 HM352847 HM352848 HM352849 HM352850 HM352851 BX648364	114156	+	TSC_hg19_v1_chr10_+_114710785 FJ010164 FJ010165 FJ010173	114687	+	AK303948 NM_001177660	714443	+	AK308026|ZDHHC6|64429|zinc finger, DHHC-type containing 6##BC017052|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##AK303646|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##NM_145206|VTI1A|143187|vesicle transport through interaction with t-SNAREs homolog 1A (yeast)##AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010164|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010165|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010173|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK303948|HABP2|3026|hyaluronan binding protein 2##NM_001177660|HABP2|3026|hyaluronan binding protein 2	0.0	
chr11	123442651	123442758	reg1041906.p2	3.504	+	AB033027 TSC_hg19_v1_chr11_+_123431038	-11667	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	-11731	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	-46200	+	AJ243396 AB032984 TSC_hg19_v1_chr11_-_123525042	82257	-	TSC_hg19_v1_chr11_-_123525303 AK314513 AL136589 NM_001040151 NM_018400	82603	-	AK023751 TSC_hg19_v1_chr11_-_123612326 BC013382 NM_003455	169641	-	AB033027|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AK314513|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AL136589|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_001040151|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_018400|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AK023751|ZNF202|7753|zinc finger protein 202##BC013382|ZNF202|7753|zinc finger protein 202##NM_003455|ZNF202|7753|zinc finger protein 202	0.0	
chr1	224921077	224921251	reg1040058.p2	3.504	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-116985	+	AB209887 NM_001115113 NM_025160	-299164	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-299404	-	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	196201	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	694565	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	694637	-	AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor	0.0	
chr1	235067304	235067374	reg1038474.p2	3.504	+	TSC_hg19_v1_chr1_-_234895746 AF193050	-171565	-	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-322093	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-323481	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	224750	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	224892	-	TSC_hg19_v1_chr1_-_235324557 CU688656 AB587533 D38491 AK292362 BC029451 NM_001161533 NM_015014	257224	-	AF193050|PP2672|100130249|uncharacterized LOC100130249##BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D38491|RBM34|23029|RNA binding motif protein 34##AK292362|RBM34|23029|RNA binding motif protein 34##BC029451|RBM34|23029|RNA binding motif protein 34##NM_001161533|RBM34|23029|RNA binding motif protein 34##NM_015014|RBM34|23029|RNA binding motif protein 34	0.0	
chr1	249136045	249136160	reg1038489.p1	3.504	+	TSC_hg19_v1_chr1_+_249132593 BC068506 BC008872	-3456	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	-3557	+	TSC_hg19_v1_chr1_+_249132449 BC029310	-3645	+	AK309421 AL133100 TSC_hg19_v1_chr1_-_249153150 AK302187 NM_001136036 AK001070 AK298899 BC002948 AK000538 AK225535	16986	-	TSC_hg19_v1_chr1_-_249153285 NM_001193328 NM_017865	17200	-	TSC_hg19_v1_chr1_+_249200433 AK123219 BC063785 NM_001017434 NM_170725 BX647065 AK298248	64321	+	BC068506|ZNF672|79894|zinc finger protein 672##BC008872|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672##BC029310|ZNF672|79894|zinc finger protein 672##AK309421|ZNF692|55657|zinc finger protein 692##AL133100|ZNF692|55657|zinc finger protein 692##AK302187|ZNF692|55657|zinc finger protein 692##NM_001136036|ZNF692|55657|zinc finger protein 692##AK001070|ZNF692|55657|zinc finger protein 692##AK298899|ZNF692|55657|zinc finger protein 692##BC002948|ZNF692|55657|zinc finger protein 692##AK000538|ZNF692|55657|zinc finger protein 692##AK225535|ZNF692|55657|zinc finger protein 692##NM_001193328|ZNF692|55657|zinc finger protein 692##NM_017865|ZNF692|55657|zinc finger protein 692##AK123219|PGBD2|267002|piggyBac transposable element derived 2##BC063785|PGBD2|267002|piggyBac transposable element derived 2##NM_001017434|PGBD2|267002|piggyBac transposable element derived 2##NM_170725|PGBD2|267002|piggyBac transposable element derived 2##BX647065|PGBD2|267002|piggyBac transposable element derived 2##AK298248|PGBD2|267002|piggyBac transposable element derived 2	0.0	
chr1	51215819	51215907	reg1034468.p1	3.504	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	-326752	-	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-640325	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-641179	+	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	209714	-	TSC_hg19_v1_chr1_-_51425740 BC067100	209893	-	TSC_hg19_v1_chr1_-_51425796 AJ271408	209936	-	NM_032110|DMRTA2|63950|DMRT-like family A2##AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1##AJ271408|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.998727	CTCF.p2:-24:0.999
chr15	75081251	75081419	reg1033640.p2	3.504	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	-6479	+	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	-6910	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-40143	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	23837	+	AK024055 NM_001030005 AB072900 BC018026 AY286501	37655	+	TSC_hg19_v1_chr15_-_75135477 AB528889 CU691158 AK075047 BC056423 AK299380	54118	-	X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like##AK024055|CPLX3|594855|complexin 3##NM_001030005|CPLX3|594855|complexin 3##AB072900|CPLX3|594855|complexin 3##BC018026|CPLX3|594855|complexin 3##AY286501|CPLX3|594855|complexin 3##AK075047|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC056423|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK299380|ULK3|25989|unc-51-like kinase 3 (C. elegans)	0.0	
chr16	11217902	11217968	reg1045921.p2	3.504	+	TSC_hg19_v1_chr16_+_11038420 NM_001243403 NM_015226 BC112897 AB002348 AB385312	-179492	+	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	-181700	-	BC071683 TSC_hg19_v1_chr16_-_11036171	-181769	-	AB000734 NM_003745 AK127621 TSC_hg19_v1_chr16_-_11350062	132115	-	X63758 BC096135 BC096136 BC096137 NM_005425	145203	-	NM_021247	149516	-	NM_001243403|CLEC16A|23274|C-type lectin domain family 16, member A##NM_015226|CLEC16A|23274|C-type lectin domain family 16, member A##BC112897|CLEC16A|23274|C-type lectin domain family 16, member A##AB002348|CLEC16A|23274|C-type lectin domain family 16, member A##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)##BC071683|DEXI|28955|Dexi homolog (mouse)##AB000734|SOCS1|8651|suppressor of cytokine signaling 1##NM_003745|SOCS1|8651|suppressor of cytokine signaling 1##AK127621|SOCS1|8651|suppressor of cytokine signaling 1##X63758|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096135|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096136|TNP2|7142|transition protein 2 (during histone to protamine replacement)##BC096137|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_005425|TNP2|7142|transition protein 2 (during histone to protamine replacement)##NM_021247|PRM3|58531|protamine 3	0.0	
chr17	25871697	25871830	reg1032066.p2	3.504	+	BC035488 BC042106 NM_014238	-72734	+	TSC_hg19_v1_chr17_+_25621147 AF069313 AF240696 BC021110 AF112205 AF106683 AF072880 AB463346 AM393409 AM393665 CU676828	-250482	+	AL110243 NM_015626 NM_134265 AK307114 TSC_hg19_v1_chr17_+_25621139 AL110269 AK074917 AK294516 AK300262 BC048007 AK222576	-250641	+	TSC_hg19_v1_chr17_+_25958181 NM_002308 NM_009587	86405	+	TSC_hg19_v1_chr17_+_25958213 AB006782 AK223232	86440	+	TSC_hg19_v1_chr17_+_25958238 AB005894 AK301624 BC110340 AK296031	86465	+	BC035488|KSR1|8844|kinase suppressor of ras 1##BC042106|KSR1|8844|kinase suppressor of ras 1##NM_014238|KSR1|8844|kinase suppressor of ras 1##AF069313|WSB1|26118|WD repeat and SOCS box containing 1##AF240696|WSB1|26118|WD repeat and SOCS box containing 1##BC021110|WSB1|26118|WD repeat and SOCS box containing 1##AF112205|WSB1|26118|WD repeat and SOCS box containing 1##AF106683|WSB1|26118|WD repeat and SOCS box containing 1##AF072880|WSB1|26118|WD repeat and SOCS box containing 1##AM393409|WSB1|26118|WD repeat and SOCS box containing 1##AM393665|WSB1|26118|WD repeat and SOCS box containing 1##AL110243|WSB1|26118|WD repeat and SOCS box containing 1##NM_015626|WSB1|26118|WD repeat and SOCS box containing 1##NM_134265|WSB1|26118|WD repeat and SOCS box containing 1##AK307114|WSB1|26118|WD repeat and SOCS box containing 1##AL110269|WSB1|26118|WD repeat and SOCS box containing 1##AK074917|WSB1|26118|WD repeat and SOCS box containing 1##AK294516|WSB1|26118|WD repeat and SOCS box containing 1##AK300262|WSB1|26118|WD repeat and SOCS box containing 1##BC048007|WSB1|26118|WD repeat and SOCS box containing 1##AK222576|WSB1|26118|WD repeat and SOCS box containing 1##NM_002308|LGALS9|3965|lectin, galactoside-binding, soluble, 9##NM_009587|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB006782|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK223232|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AB005894|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK301624|LGALS9|3965|lectin, galactoside-binding, soluble, 9##BC110340|LGALS9|3965|lectin, galactoside-binding, soluble, 9##AK296031|LGALS9|3965|lectin, galactoside-binding, soluble, 9	0.0	
chr2	156229627	156229737	reg1036231.p1	3.504	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-674493	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-1501238	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-1894431	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	957008	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	959481	-	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	1062276	+	NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	0.206886	CTCF.p2:-12:0.207
chr5	36602958	36603060	reg1040681.p1	3.504	+	BC017951 AK058151 AK302947 TSC_hg19_v1_chr5_-_36302002 BC047660 NM_001161429 NM_145000	-301005	-	BC062567 NM_153013 AK304009	-360698	-	NM_001085411 TSC_hg19_v1_chr5_-_36241996	-361021	-	NM_001166696 NM_004172	3447	+	TSC_hg19_v1_chr5_+_36606718 AK312304 BC037310 AK057823 AK293886 BC022285 BC054475 AK295032 AK295754 D26443 L19158	3719	+	NM_001166695 U03504 AB529121 AY954110 TSC_hg19_v1_chr5_+_36608562	5487	+	BC017951|RANBP3L|202151|RAN binding protein 3-like##AK058151|RANBP3L|202151|RAN binding protein 3-like##AK302947|RANBP3L|202151|RAN binding protein 3-like##BC047660|RANBP3L|202151|RAN binding protein 3-like##NM_001161429|RANBP3L|202151|RAN binding protein 3-like##NM_145000|RANBP3L|202151|RAN binding protein 3-like##BC062567|NADKD1|133686|NAD kinase domain containing 1##NM_153013|NADKD1|133686|NAD kinase domain containing 1##AK304009|NADKD1|133686|NAD kinase domain containing 1##NM_001085411|NADKD1|133686|NAD kinase domain containing 1##NM_001166696|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_004172|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK312304|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC037310|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK057823|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK293886|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC022285|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##BC054475|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295032|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AK295754|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##D26443|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##L19158|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##NM_001166695|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##U03504|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3##AY954110|SLC1A3|6507|solute carrier family 1 (glial high affinity glutamate transporter), member 3	0.02965	
chr6	126949442	126949539	reg1040317.p1	3.504	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	-288220	+	TSC_hg19_v1_chr6_+_126307685 AK308651	-641827	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	-641888	+	TSC_hg19_v1_chr6_+_127439818 BC022367	490321	+	NM_032784 AF251057	490561	+	NM_001242851 NM_001242844 NM_001242849 NM_001242852 TSC_hg19_v1_chr6_+_127587982 NM_001242845 NM_001242846 NM_001242850 NM_030963	638414	+	BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC022367|RSPO3|84870|R-spondin 3##NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3##NM_001242851|RNF146|81847|ring finger protein 146##NM_001242844|RNF146|81847|ring finger protein 146##NM_001242849|RNF146|81847|ring finger protein 146##NM_001242852|RNF146|81847|ring finger protein 146##NM_001242845|RNF146|81847|ring finger protein 146##NM_001242846|RNF146|81847|ring finger protein 146##NM_001242850|RNF146|81847|ring finger protein 146##NM_030963|RNF146|81847|ring finger protein 146	0.043355	
chr7	98438017	98438134	reg1035082.p2	3.504	+	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	-191339	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-407642	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-407781	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	29455	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	29552	-	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	29601	-	NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130	0.539602	CTCF.p2:66:0.540
chr8	86112861	86112988	reg1035330.p2	3.504	+	NM_001083589	-13015	+	TSC_hg19_v1_chr8_+_86089641 AB590542	-23278	+	NM_001083588 NM_001951 U31556 TSC_hg19_v1_chr8_+_86089622 Z78409 X86097	-23303	+	BC032347 TSC_hg19_v1_chr8_-_86132612 BC146983 BC146988 BC157825 BC171873 AK000414 BC055092 BC062221 NM_001099670 NM_001099671 NM_001099672 NM_001099673	19680	-	TSC_hg19_v1_chr8_+_86132857 AK093753	19867	+	TSC_hg19_v1_chr8_+_86157708 NM_198584	44783	+	NM_001083589|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001083588|E2F5|1875|E2F transcription factor 5, p130-binding##NM_001951|E2F5|1875|E2F transcription factor 5, p130-binding##U31556|E2F5|1875|E2F transcription factor 5, p130-binding##Z78409|E2F5|1875|E2F transcription factor 5, p130-binding##X86097|E2F5|1875|E2F transcription factor 5, p130-binding##BC032347|C8orf59|401466|chromosome 8 open reading frame 59##BC146983|C8orf59|401466|chromosome 8 open reading frame 59##BC146988|C8orf59|401466|chromosome 8 open reading frame 59##BC157825|C8orf59|401466|chromosome 8 open reading frame 59##BC171873|C8orf59|401466|chromosome 8 open reading frame 59##BC055092|C8orf59|401466|chromosome 8 open reading frame 59##BC062221|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099670|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099671|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099672|C8orf59|401466|chromosome 8 open reading frame 59##NM_001099673|C8orf59|401466|chromosome 8 open reading frame 59##NM_198584|CA13|377677|carbonic anhydrase XIII	0.0	
chrX	108514456	108514614	reg1029962.p2	3.504	+	NM_003604 AF007567	-534913	-	TSC_hg19_v1_chrX_+_107683035 AK311302 BC151846 M90464 NM_000495 NM_033380	-831451	+	BT007228 L22763 U04845 NM_001847 BC005305	-831872	-	NM_001522 L37378	210750	-	AK023289 NM_018698 BC120984 BC120985	264479	+	NM_001242617 TSC_hg19_v1_chrX_+_108780077 AF201942 BC014888 AF212223	265548	+	NM_003604|IRS4|8471|insulin receptor substrate 4##AF007567|IRS4|8471|insulin receptor substrate 4##BC151846|COL4A5|1287|collagen, type IV, alpha 5##M90464|COL4A5|1287|collagen, type IV, alpha 5##NM_000495|COL4A5|1287|collagen, type IV, alpha 5##NM_033380|COL4A5|1287|collagen, type IV, alpha 5##BT007228|COL4A6|1288|collagen, type IV, alpha 6##L22763|COL4A6|1288|collagen, type IV, alpha 6##U04845|COL4A6|1288|collagen, type IV, alpha 6##NM_001847|COL4A6|1288|collagen, type IV, alpha 6##BC005305|COL4A6|1288|collagen, type IV, alpha 6##NM_001522|GUCY2F|2986|guanylate cyclase 2F, retinal##L37378|GUCY2F|2986|guanylate cyclase 2F, retinal##AK023289|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_018698|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120984|NXT2|55916|nuclear transport factor 2-like export factor 2##BC120985|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2##AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2##BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2##AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2	0.0	
chr10	18248879	18248956	reg1039196.p2	3.503	+	NM_001145195 NM_152725 AK055061 BC035118 BC047635 AK295294 BC094700	-8088	+	AK308132 AK308167 J05550 NM_002438 X55635 BC146838 DQ663787	-150524	+	NM_001098844 BC157856	-207696	+	NM_201593 NM_201596 NM_201597 S60415 BC136409 AF137376 AF423191 AY393860 AY675091 AK296471 AK311694 AK307526 NM_001167945 NM_201571 NM_201572 AK293837	180790	+	NM_000724 AB208917 U95019	300723	+	AK310943 NM_201590	380696	+	NM_001145195|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##NM_152725|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK055061|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC035118|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC047635|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##AK295294|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##BC094700|SLC39A12|221074|solute carrier family 39 (zinc transporter), member 12##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##NM_201593|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201596|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201597|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##S60415|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##BC136409|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF137376|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AF423191|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY393860|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AY675091|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK296471|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK311694|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK307526|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_001167945|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201571|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201572|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK293837|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_000724|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AB208917|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##U95019|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##AK310943|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit##NM_201590|CACNB2|783|calcium channel, voltage-dependent, beta 2 subunit	0.0	
chr10	31040036	31040216	reg1007297.p2	3.503	+	AF139543 BC066294 NM_183058	-121491	-	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-317005	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-317187	+	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	248326	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	280695	-	TSC_hg19_v1_chr10_+_31607451 BX647794	567310	+	AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1	0.0	
chr10	65114835	65114964	reg1040994.p1	3.503	+	BC126403 BC143722 TSC_hg19_v1_chr10_-_65029004 BX537954 NM_004241 BC108649	-85984	-	TSC_hg19_v1_chr10_+_64893098 AF267866 AK301656 AK225257 AK225256 AY267839 AY267840 BC011707 AB590768 EU832288 EU832373	-221753	+	TSC_hg19_v1_chr10_+_64893044 NM_030759 AK054957 AL136656	-221868	+	TSC_hg19_v1_chr10_+_65224979 BC007866 AK314171	110085	+	AK027280 EF068222 NM_032776 TSC_hg19_v1_chr10_-_65225738	110779	-	BC067238 TSC_hg19_v1_chr10_-_65225775	110876	-	BC126403|JMJD1C|221037|jumonji domain containing 1C##BC143722|JMJD1C|221037|jumonji domain containing 1C##BX537954|JMJD1C|221037|jumonji domain containing 1C##NM_004241|JMJD1C|221037|jumonji domain containing 1C##BC108649|JMJD1C|221037|jumonji domain containing 1C##AF267866|NRBF2|29982|nuclear receptor binding factor 2##AK301656|NRBF2|29982|nuclear receptor binding factor 2##AK225257|NRBF2|29982|nuclear receptor binding factor 2##AK225256|NRBF2|29982|nuclear receptor binding factor 2##AY267839|NRBF2|29982|nuclear receptor binding factor 2##AY267840|NRBF2|29982|nuclear receptor binding factor 2##BC011707|NRBF2|29982|nuclear receptor binding factor 2##EU832288|NRBF2|29982|nuclear receptor binding factor 2##EU832373|NRBF2|29982|nuclear receptor binding factor 2##NM_030759|NRBF2|29982|nuclear receptor binding factor 2##AK054957|NRBF2|29982|nuclear receptor binding factor 2##AL136656|NRBF2|29982|nuclear receptor binding factor 2##BC007866|LOC84989|84989|uncharacterized LOC84989##AK314171|LOC84989|84989|uncharacterized LOC84989##AK027280|JMJD1C|221037|jumonji domain containing 1C##EF068222|JMJD1C|221037|jumonji domain containing 1C##NM_032776|JMJD1C|221037|jumonji domain containing 1C##BC067238|JMJD1C|221037|jumonji domain containing 1C	0.0	
chr11	88035049	88035172	reg1029707.p2	3.503	+	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	-126518	-	AK024853 TSC_hg19_v1_chr11_+_87032449	-1002668	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	-1286132	+	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	35757	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	35792	-	TSC_hg19_v1_chr11_-_88070905 BX537913 NM_001114173 NM_001814 NM_148170	35821	-	BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family##AK024853|TMEM135|65084|transmembrane protein 135##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C##BX537913|CTSC|1075|cathepsin C##NM_001114173|CTSC|1075|cathepsin C##NM_001814|CTSC|1075|cathepsin C##NM_148170|CTSC|1075|cathepsin C	0.0	
chr1	207581367	207581448	reg1040438.p1	3.503	+	TSC_hg19_v1_chr1_+_207495092 AB240566 AB240567 AB240568 DQ890776 DQ893935 CU674648 BT007159 M15799	-86302	+	TSC_hg19_v1_chr1_+_207495084 AB240569 AB240570	-86330	+	TSC_hg19_v1_chr1_+_207495024 AK312448 AK300621 AK298549 BC001288 M30142 M31516	-86372	+	X68990 NM_001006658 NM_001877 BC136394 BC032548 AK223627 AK301496 M26004 J03565 BC090937 Y00649	46254	+	NM_000573 NM_000651 AK309342 AK298486 Y00816 BC032550 X14362	88171	+	NM_175710 BC109190 BC109191	237080	+	AB240566|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240567|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240568|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ890776|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##DQ893935|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BT007159|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M15799|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240569|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AB240570|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK312448|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK300621|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##AK298549|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##BC001288|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M30142|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##M31516|CD55|1604|CD55 molecule, decay accelerating factor for complement (Cromer blood group)##NM_001006658|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_001877|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC136394|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC032548|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK223627|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##AK301496|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##M26004|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##J03565|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##BC090937|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##Y00649|CR2|1380|complement component (3d/Epstein Barr virus) receptor 2##NM_000573|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_000651|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK309342|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##AK298486|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##Y00816|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##BC032550|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##X14362|CR1|1378|complement component (3b/4b) receptor 1 (Knops blood group)##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like	0.0	
chr14	92792345	92792433	reg1042075.p1	3.503	+	NM_153646 AF520704 AF520705 BC069653	-2213	+	AK295059 NM_153647	-2853	+	AF520706 NM_153648	-3465	+	TSC_hg19_v1_chr14_+_92980007 AK021762 NM_024832 BC032614 BC070062 BX248258 AB081753	187570	+	TSC_hg19_v1_chr14_+_93118584 AK090451 AB060338	326247	+	AK026092 TSC_hg19_v1_chr14_+_93118844 AK074176	326434	+	NM_153646|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520704|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520705|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##BC069653|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK295059|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153647|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AF520706|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##NM_153648|SLC24A4|123041|solute carrier family 24 (sodium/potassium/calcium exchanger), member 4##AK021762|RIN3|79890|Ras and Rab interactor 3##NM_024832|RIN3|79890|Ras and Rab interactor 3##BC032614|RIN3|79890|Ras and Rab interactor 3##BC070062|RIN3|79890|Ras and Rab interactor 3##BX248258|RIN3|79890|Ras and Rab interactor 3##AB081753|RIN3|79890|Ras and Rab interactor 3##AK090451|RIN3|79890|Ras and Rab interactor 3##AB060338|RIN3|79890|Ras and Rab interactor 3##AK026092|RIN3|79890|Ras and Rab interactor 3##AK074176|RIN3|79890|Ras and Rab interactor 3	0.627476	CTCF.p2:-10:0.627
chr1	63377822	63377939	reg1035527.p2	3.503	+	TSC_hg19_v1_chr1_+_63249807 NM_032852 NM_178221 AK027773 BC018678 BC033024 BC008395	-128067	+	DQ341187 TSC_hg19_v1_chr1_-_63154045 AK055401 NM_033407 AK292640	-223753	-	NM_014495 AK315304 TSC_hg19_v1_chr1_+_63063190 AK289426 BC007059 BC058287 AY358273 AF152562 AB590604 CU691298	-314669	+	AB464527 NM_012183	410849	+	TSC_hg19_v1_chr1_+_63789065 L12142	411204	+	NM_013339 AF063604 TSC_hg19_v1_chr1_+_63833313	455407	+	NM_032852|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##NM_178221|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##AK027773|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC018678|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC033024|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##BC008395|ATG4C|84938|ATG4 autophagy related 4 homolog C (S. cerevisiae)##DQ341187|DOCK7|85440|dedicator of cytokinesis 7##AK055401|DOCK7|85440|dedicator of cytokinesis 7##NM_033407|DOCK7|85440|dedicator of cytokinesis 7##AK292640|DOCK7|85440|dedicator of cytokinesis 7##NM_014495|ANGPTL3|27329|angiopoietin-like 3##AK315304|ANGPTL3|27329|angiopoietin-like 3##AK289426|ANGPTL3|27329|angiopoietin-like 3##BC007059|ANGPTL3|27329|angiopoietin-like 3##BC058287|ANGPTL3|27329|angiopoietin-like 3##AY358273|ANGPTL3|27329|angiopoietin-like 3##AF152562|ANGPTL3|27329|angiopoietin-like 3##NM_012183|FOXD3|27022|forkhead box D3##L12142|FOXD3|27022|forkhead box D3##NM_013339|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)##AF063604|ALG6|29929|asparagine-linked glycosylation 6, alpha-1,3-glucosyltransferase homolog (S. cerevisiae)	0.949529	CTCF.p2:2:0.950
chr16	70332903	70332990	reg1034045.p1	3.503	+	TSC_hg19_v1_chr16_-_70323413 AK222824 AK225116 AK307782 D32050 NM_001605	-9535	-	BC011451 TSC_hg19_v1_chr16_-_70323364 AK299098	-9579	-	TSC_hg19_v1_chr16_-_70285844 BC052252 NM_058219 BC039194	-47113	-	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	130	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	202	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	47882	+	AK222824|AARS|16|alanyl-tRNA synthetase##AK225116|AARS|16|alanyl-tRNA synthetase##AK307782|AARS|16|alanyl-tRNA synthetase##D32050|AARS|16|alanyl-tRNA synthetase##NM_001605|AARS|16|alanyl-tRNA synthetase##BC011451|AARS|16|alanyl-tRNA synthetase##AK299098|AARS|16|alanyl-tRNA synthetase##BC052252|EXOSC6|118460|exosome component 6##NM_058219|EXOSC6|118460|exosome component 6##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A	0.0	
chr19	41884370	41884444	reg1044504.p1	3.503	+	NM_001042595 BC063705	-1225	+	NM_001098821 NM_001098822 NM_001098823 NM_001098824	-1970	+	TSC_hg19_v1_chr19_-_41870052 BC004157 BC004444 NM_030578	-14368	-	TSC_hg19_v1_chr19_-_41903262 AB463622 BC007742 AK314941 AF281134 NM_020158 BC107696 AF285785	18892	-	NM_000709 NM_001164783 TSC_hg19_v1_chr19_+_41903714	19297	+	TSC_hg19_v1_chr19_+_41903722 AL833143 BC023983 Z14093	19313	+	NM_001042595|TMEM91|641649|transmembrane protein 91##BC063705|TMEM91|641649|transmembrane protein 91##NM_001098821|TMEM91|641649|transmembrane protein 91##NM_001098822|TMEM91|641649|transmembrane protein 91##NM_001098823|TMEM91|641649|transmembrane protein 91##NM_001098824|TMEM91|641649|transmembrane protein 91##BC004157|B9D2|80776|B9 protein domain 2##BC004444|B9D2|80776|B9 protein domain 2##NM_030578|B9D2|80776|B9 protein domain 2##BC007742|EXOSC5|56915|exosome component 5##AK314941|EXOSC5|56915|exosome component 5##AF281134|EXOSC5|56915|exosome component 5##NM_020158|EXOSC5|56915|exosome component 5##BC107696|EXOSC5|56915|exosome component 5##AF285785|EXOSC5|56915|exosome component 5##NM_000709|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##NM_001164783|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##AL833143|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##BC023983|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##Z14093|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	0.0	
chr20	51908206	51908330	reg1043134.p1	3.503	+	AK302570 NM_001193421	-106447	+	AK091206 AX746848 TSC_hg19_v1_chr20_+_51589805	-318490	+	BX640770 NM_173485	-319323	+	AF041259 NM_006526	291367	-	TSC_hg19_v1_chr20_-_52210810 AK290350	302531	-	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	778794	-	AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##AK091206|TSHZ2|128553|teashirt zinc finger homeobox 2##BX640770|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_173485|TSHZ2|128553|teashirt zinc finger homeobox 2##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK290350|ZNF217|7764|zinc finger protein 217##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1	0.856437	CTCF.p2:11:0.856
chr2	219134785	219134921	reg1035763.p1	3.503	+	BC020244 AB209790 BC014122 TSC_hg19_v1_chr2_-_219134838 AK225078	-36	-	AK122660 NM_001077191 NM_001077194 NM_170699 BC033625	-9109	+	AF006085 NM_005731 AB463393 BT006898	-52697	+	TSC_hg19_v1_chr2_-_219134861 BC039866 CR456755 M95627	1	-	AK131047 TSC_hg19_v1_chr2_-_219134886 NM_001087	27	-	AF318057 AF417001 NM_001077399 NM_015488 AK289867 TSC_hg19_v1_chr2_+_219135241 BC036457 AY039043 BC021118 AL080092 CU676836 EU831585 EU831670 AB033010	340	+	BC020244|AAMP|14|angio-associated, migratory cell protein##AB209790|AAMP|14|angio-associated, migratory cell protein##BC014122|AAMP|14|angio-associated, migratory cell protein##AK225078|AAMP|14|angio-associated, migratory cell protein##AK122660|GPBAR1|151306|G protein-coupled bile acid receptor 1##NM_001077191|GPBAR1|151306|G protein-coupled bile acid receptor 1##NM_001077194|GPBAR1|151306|G protein-coupled bile acid receptor 1##NM_170699|GPBAR1|151306|G protein-coupled bile acid receptor 1##BC033625|GPBAR1|151306|G protein-coupled bile acid receptor 1##AF006085|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##NM_005731|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##BT006898|ARPC2|10109|actin related protein 2/3 complex, subunit 2, 34kDa##BC039866|AAMP|14|angio-associated, migratory cell protein##CR456755|AAMP|14|angio-associated, migratory cell protein##M95627|AAMP|14|angio-associated, migratory cell protein##AK131047|AAMP|14|angio-associated, migratory cell protein##NM_001087|AAMP|14|angio-associated, migratory cell protein##AF318057|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AF417001|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##NM_001077399|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##NM_015488|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AK289867|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC036457|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AY039043|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##BC021118|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AL080092|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##EU831585|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##EU831670|PNKD|25953|paroxysmal nonkinesigenic dyskinesia##AB033010|PNKD|25953|paroxysmal nonkinesigenic dyskinesia	0.0	
chr22	50329776	50329956	reg1034770.p1	3.503	+	TSC_hg19_v1_chr22_+_50312337 BC050675 DQ470678 AK225930 AY358355 BC002894 DQ470676 DQ470677 DQ470680 AJ968414	-17491	+	TSC_hg19_v1_chr22_+_50312328 DQ470679 NM_001135101 NM_024324 AK308692 AK308535	-17562	+	TSC_hg19_v1_chr22_-_50312107 NM_024105	-17759	-	TSC_hg19_v1_chr22_+_50354140 NM_001001852 AB114795	24283	+	TSC_hg19_v1_chr22_+_50354433 AK292005 BC141855 BC052239 AB528933 BC140030	24645	+	NM_001001694 AK123987	121204	-	BC050675|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470678|CRELD2|79174|cysteine-rich with EGF-like domains 2##AK225930|CRELD2|79174|cysteine-rich with EGF-like domains 2##AY358355|CRELD2|79174|cysteine-rich with EGF-like domains 2##BC002894|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470676|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470677|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470680|CRELD2|79174|cysteine-rich with EGF-like domains 2##AJ968414|CRELD2|79174|cysteine-rich with EGF-like domains 2##DQ470679|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_001135101|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_024324|CRELD2|79174|cysteine-rich with EGF-like domains 2##AK308535|CRELD2|79174|cysteine-rich with EGF-like domains 2##NM_024105|ALG12|79087|asparagine-linked glycosylation 12, alpha-1,6-mannosyltransferase homolog (S. cerevisiae)##NM_001001852|PIM3|415116|pim-3 oncogene##AB114795|PIM3|415116|pim-3 oncogene##AK292005|PIM3|415116|pim-3 oncogene##BC141855|PIM3|415116|pim-3 oncogene##BC052239|PIM3|415116|pim-3 oncogene##BC140030|PIM3|415116|pim-3 oncogene##NM_001001694|IL17REL|400935|interleukin 17 receptor E-like##AK123987|IL17REL|400935|interleukin 17 receptor E-like	0.0	
chr5	133884462	133884540	reg1037325.p1	3.503	+	BC012749 D87076 NM_015288 TSC_hg19_v1_chr5_+_133861926 AK290471	-22696	+	TSC_hg19_v1_chr5_+_133861359 AK056471 BC021962 AK292635 AK074123	-23138	+	TSC_hg19_v1_chr5_+_133842276 BC032795	-42211	+	BC002847 TSC_hg19_v1_chr5_-_133968519 AK223452 AF092130 BC093034 NM_001033503 NM_016103	83996	-	TSC_hg19_v1_chr5_+_133984493 AK304060 NM_001252231 NM_021982 BC019341	99930	+	TSC_hg19_v1_chr5_+_134074237 NM_001745 BC130325 AK313156 BC063532 U18242 AB590695 HQ258172 AF068179	189809	+	D87076|PHF15|23338|PHD finger protein 15##NM_015288|PHF15|23338|PHD finger protein 15##AK290471|PHF15|23338|PHD finger protein 15##AK056471|PHF15|23338|PHD finger protein 15##BC021962|PHF15|23338|PHD finger protein 15##AK292635|PHF15|23338|PHD finger protein 15##AK074123|PHF15|23338|PHD finger protein 15##BC002847|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK223452|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AF092130|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##BC093034|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_001033503|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##NM_016103|SAR1B|51128|SAR1 homolog B (S. cerevisiae)##AK304060|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001252231|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_021982|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##BC019341|SEC24A|10802|SEC24 family, member A (S. cerevisiae)##NM_001745|CAMLG|819|calcium modulating ligand##BC130325|CAMLG|819|calcium modulating ligand##AK313156|CAMLG|819|calcium modulating ligand##BC063532|CAMLG|819|calcium modulating ligand##U18242|CAMLG|819|calcium modulating ligand##HQ258172|CAMLG|819|calcium modulating ligand##AF068179|CAMLG|819|calcium modulating ligand	0.0	
chr6	11806612	11806679	reg1037097.p1	3.503	+	NM_001143948 NM_032744	-27366	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-268147	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-424105	-	NM_002114	206078	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	483948	+	TSC_hg19_v1_chr6_+_12514301 D28417	707657	+	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr6	2849012	2849193	reg1037820.p1	3.503	+	TSC_hg19_v1_chr6_-_2842202 AK304641 AK309765	-6905	-	TSC_hg19_v1_chr6_-_2842095 BC009015 NM_030666 M93056 AK298044 AK312973 AK223370 AK291327	-7020	-	TSC_hg19_v1_chr6_-_2840686 BT006928 AB590702	-8350	-	TSC_hg19_v1_chr6_-_2903544 BC002538 AB060690 L40378 AK314842 NM_004155	54406	-	AK098566 TSC_hg19_v1_chr6_-_2971511	122312	-	Z22658 TSC_hg19_v1_chr6_-_2971802 BC098564	122709	-	AK304641|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK309765|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC009015|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##NM_030666|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##M93056|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK298044|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK312973|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK223370|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##AK291327|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BT006928|SERPINB1|1992|serpin peptidase inhibitor, clade B (ovalbumin), member 1##BC002538|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AB060690|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##L40378|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK314842|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##NM_004155|SERPINB9|5272|serpin peptidase inhibitor, clade B (ovalbumin), member 9##AK098566|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##Z22658|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6##BC098564|SERPINB6|5269|serpin peptidase inhibitor, clade B (ovalbumin), member 6	0.0	
chr7	121170306	121170487	reg1028126.p1	3.503	+	TSC_hg19_v1_chr7_-_121036363 AK292731 AK290682 BC068526 NM_001040020 NM_014888	-133982	-	TSC_hg19_v1_chr7_-_121036340 D87120 BC024200 BC046932	-134059	-	AF169963 NM_057168	-201307	+	NM_001206838 NM_001206839 NM_002851 TSC_hg19_v1_chr7_+_121513164	342765	+	TSC_hg19_v1_chr7_+_121513214 U88967	342825	+	AK225898 AF229180 TSC_hg19_v1_chr7_-_121784304 AK294326 NM_005763	613893	-	AK292731|FAM3C|10447|family with sequence similarity 3, member C##AK290682|FAM3C|10447|family with sequence similarity 3, member C##BC068526|FAM3C|10447|family with sequence similarity 3, member C##NM_001040020|FAM3C|10447|family with sequence similarity 3, member C##NM_014888|FAM3C|10447|family with sequence similarity 3, member C##D87120|FAM3C|10447|family with sequence similarity 3, member C##BC024200|FAM3C|10447|family with sequence similarity 3, member C##BC046932|FAM3C|10447|family with sequence similarity 3, member C##AF169963|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_057168|WNT16|51384|wingless-type MMTV integration site family, member 16##NM_001206838|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_001206839|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##NM_002851|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##U88967|PTPRZ1|5803|protein tyrosine phosphatase, receptor-type, Z polypeptide 1##AK225898|AASS|10157|aminoadipate-semialdehyde synthase##AF229180|AASS|10157|aminoadipate-semialdehyde synthase##AK294326|AASS|10157|aminoadipate-semialdehyde synthase##NM_005763|AASS|10157|aminoadipate-semialdehyde synthase	0.0	
chr8	37851302	37851417	reg1040345.p2	3.503	+	AY487247 FJ170286 FJ170287 BC075017 AK313857 X70811 AK309919 AK293033 NM_000025	-27275	-	S53291 TSC_hg19_v1_chr8_-_37822825	-28540	-	BC029504 NM_152413	-53713	-	TSC_hg19_v1_chr8_+_37888059 NM_004095 BC004459 AB044548 AK312011 BC058073 DQ890570 DQ893731 AB590574 BT007162 CR456769 L36055	36681	+	NM_004674 TSC_hg19_v1_chr8_+_37963033	111662	+	TSC_hg19_v1_chr8_+_37963046 AK291750 AK293699 AB020982 AF056718 AK298483 AB385056 AK311336	111725	+	AY487247|ADRB3|155|adrenergic, beta-3-, receptor##FJ170286|ADRB3|155|adrenergic, beta-3-, receptor##FJ170287|ADRB3|155|adrenergic, beta-3-, receptor##BC075017|ADRB3|155|adrenergic, beta-3-, receptor##AK313857|ADRB3|155|adrenergic, beta-3-, receptor##X70811|ADRB3|155|adrenergic, beta-3-, receptor##AK309919|ADRB3|155|adrenergic, beta-3-, receptor##AK293033|ADRB3|155|adrenergic, beta-3-, receptor##NM_000025|ADRB3|155|adrenergic, beta-3-, receptor##S53291|ADRB3|155|adrenergic, beta-3-, receptor##BC029504|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##NM_152413|GOT1L1|137362|glutamic-oxaloacetic transaminase 1-like 1##NM_004095|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##BC004459|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##AB044548|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##AK312011|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##BC058073|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##DQ890570|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##DQ893731|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##BT007162|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##CR456769|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##L36055|EIF4EBP1|1978|eukaryotic translation initiation factor 4E binding protein 1##NM_004674|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK291750|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK293699|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AB020982|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AF056718|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK298483|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)##AK311336|ASH2L|9070|ash2 (absent, small, or homeotic)-like (Drosophila)	0.994935	CTCF.p2:-16:0.995
chr9	36765813	36765892	reg1032714.p1	3.503	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-192928	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-364677	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-364955	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	268564	-	TSC_hg19_v1_chr9_+_37079908 AK091718	314054	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	314156	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.0	
chr9	92305576	92305702	reg1030168.p2	3.503	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-85658	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-192632	-	BC054500 NM_001142287 NM_006378	-211029	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	1099480	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1258397	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	1258428	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.0	
chrX	148738280	148738409	reg1025527.p2	3.503	+	AK097391 AK096308 AK297335 TSC_hg19_v1_chrX_-_148713449 NM_001174092 NM_032508 AF530473	-24861	-	TSC_hg19_v1_chrX_-_148713302 BC103820 BC103821 BC103822	-25045	-	NM_001164415 NM_016153	-61371	-	AK127849 NM_001011544	31558	+	NM_005366 AY747607 BC004479	55425	+	NM_001164415 NM_016153	117381	+	AK097391|TMEM185A|84548|transmembrane protein 185A##AK096308|TMEM185A|84548|transmembrane protein 185A##AK297335|TMEM185A|84548|transmembrane protein 185A##NM_001174092|TMEM185A|84548|transmembrane protein 185A##NM_032508|TMEM185A|84548|transmembrane protein 185A##AF530473|TMEM185A|84548|transmembrane protein 185A##BC103820|TMEM185A|84548|transmembrane protein 185A##BC103821|TMEM185A|84548|transmembrane protein 185A##BC103822|TMEM185A|84548|transmembrane protein 185A##NM_001164415|HSFX2|100130086|heat shock transcription factor family, X linked 2##NM_016153|HSFX1|100506164|heat shock transcription factor family, X linked 1##AK127849|MAGEA11|4110|melanoma antigen family A, 11##NM_001011544|MAGEA11|4110|melanoma antigen family A, 11##NM_005366|MAGEA11|4110|melanoma antigen family A, 11##AY747607|MAGEA11|4110|melanoma antigen family A, 11##BC004479|MAGEA11|4110|melanoma antigen family A, 11##NM_001164415|HSFX2|100130086|heat shock transcription factor family, X linked 2##NM_016153|HSFX1|100506164|heat shock transcription factor family, X linked 1	0.361038	CTCF.p2:-16:0.361
chr10	78871636	78871717	reg1010094.p1	3.502	+	AF267860 NM_032024	-1329158	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-1710111	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-1710195	-	AF118141 TSC_hg19_v1_chr10_-_79397246	525549	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	525660	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	525730	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.0	
chr10	81046401	81046467	reg1044424.p2	3.502	+	TSC_hg19_v1_chr10_+_81003207 AB033050	-43304	+	TSC_hg19_v1_chr10_+_80899458 AK025812	-146950	+	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	-217646	+	AK299728 TSC_hg19_v1_chr10_+_81065901	19454	+	TSC_hg19_v1_chr10_+_81070578 BC025342 BC068072	24210	+	AL049432 TSC_hg19_v1_chr10_+_81073775 AK023603	27405	+	AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK299728|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC025342|ZMIZ1|57178|zinc finger, MIZ-type containing 1##BC068072|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AL049432|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK023603|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.0	
chr11	67148872	67149053	reg1043130.p2	3.502	+	AK298052 NM_001166212	-7315	-	DQ891525 DQ894715 AB528390 AY049779 BC066229 BC066230 BC066231 AF172854 BC012939 AF176911 NM_013246	-7856	-	AF179890 BC001334 TSC_hg19_v1_chr11_-_67121006 BC070250 AB209274 NM_021173	-27958	-	TSC_hg19_v1_chr11_+_67159464 BC014848 NM_004584 U53174 AK315348 CR536508	10506	+	NM_001243224	11813	+	BT006629 AB464100 S57501 TSC_hg19_v1_chr11_-_67169297 AK313586 X70848 M63960 BC004482 BC001888	20312	-	AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ891525|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ894715|CLCF1|23529|cardiotrophin-like cytokine factor 1##AY049779|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066229|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066230|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066231|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF172854|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC012939|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF176911|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_013246|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF179890|POLD4|57804|polymerase (DNA-directed), delta 4##BC001334|POLD4|57804|polymerase (DNA-directed), delta 4##BC070250|POLD4|57804|polymerase (DNA-directed), delta 4##AB209274|POLD4|57804|polymerase (DNA-directed), delta 4##NM_021173|POLD4|57804|polymerase (DNA-directed), delta 4##BC014848|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_004584|RAD9A|5883|RAD9 homolog A (S. pombe)##U53174|RAD9A|5883|RAD9 homolog A (S. pombe)##AK315348|RAD9A|5883|RAD9 homolog A (S. pombe)##CR536508|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_001243224|RAD9A|5883|RAD9 homolog A (S. pombe)##BT006629|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##S57501|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##AK313586|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##X70848|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##M63960|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC004482|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC001888|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme	0.086977	
chr1	247282289	247282385	reg1025330.p1	3.502	+	TSC_hg19_v1_chr1_-_247275541 AK127619 NM_207401	-6715	-	TSC_hg19_v1_chr1_-_247267631 AK022668 AX721155 AK056020 AX721139 BC015312 NM_001142572 NM_024804	-14676	-	TSC_hg19_v1_chr1_-_247242116 AK126366 NM_001204220 NM_033213	-40224	-	BC032514 BC096349 BC096350 BC096351 BC099661 BC013605 AK054647 NM_001243740 NM_003431	52947	-	BC126341 BC126367 NM_173858	136986	+	TSC_hg19_v1_chr1_-_247494994 BC007263 NM_032752	212680	-	AK127619|C1orf229|388759|chromosome 1 open reading frame 229##NM_207401|C1orf229|388759|chromosome 1 open reading frame 229##AK022668|ZNF669|79862|zinc finger protein 669##AK056020|ZNF669|79862|zinc finger protein 669##BC015312|ZNF669|79862|zinc finger protein 669##NM_001142572|ZNF669|79862|zinc finger protein 669##NM_024804|ZNF669|79862|zinc finger protein 669##AK126366|ZNF670-ZNF695|100533111|ZNF670-ZNF695 readthrough##NM_001204220|ZNF670|93474|zinc finger protein 670##NM_033213|ZNF670|93474|zinc finger protein 670##BC032514|ZNF124|7678|zinc finger protein 124##BC096349|ZNF124|7678|zinc finger protein 124##BC096350|ZNF124|7678|zinc finger protein 124##BC096351|ZNF124|7678|zinc finger protein 124##BC099661|ZNF124|7678|zinc finger protein 124##BC013605|ZNF124|7678|zinc finger protein 124##AK054647|ZNF124|7678|zinc finger protein 124##NM_001243740|ZNF124|7678|zinc finger protein 124##NM_003431|ZNF124|7678|zinc finger protein 124##BC126341|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC126367|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##NM_173858|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC007263|ZNF496|84838|zinc finger protein 496##NM_032752|ZNF496|84838|zinc finger protein 496	0.972435	CTCF.p2:-14:0.972
chr1	31238299	31238394	reg1038304.p2	3.502	+	TSC_hg19_v1_chr1_-_31230697 NM_006762	-7656	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	-7714	-	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	-41914	-	TSC_hg19_v1_chr1_-_31345363 AL049426	107052	-	AB385258 AF248634 NM_014654 TSC_hg19_v1_chr1_-_31381606	143202	-	TSC_hg19_v1_chr1_-_31538543 BC013398 D43951 AK291779 AK300457 AF315592 AK096476 AK222605	300171	-	NM_006762|LAPTM5|7805|lysosomal protein transmembrane 5##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##AL049426|SDC3|9672|syndecan 3##AF248634|SDC3|9672|syndecan 3##NM_014654|SDC3|9672|syndecan 3##BC013398|PUM1|9698|pumilio homolog 1 (Drosophila)##D43951|PUM1|9698|pumilio homolog 1 (Drosophila)##AK291779|PUM1|9698|pumilio homolog 1 (Drosophila)##AK300457|PUM1|9698|pumilio homolog 1 (Drosophila)##AF315592|PUM1|9698|pumilio homolog 1 (Drosophila)##AK096476|PUM1|9698|pumilio homolog 1 (Drosophila)##AK222605|PUM1|9698|pumilio homolog 1 (Drosophila)	0.0	
chr13	99138808	99138880	reg1041293.p1	3.502	+	TSC_hg19_v1_chr13_+_99058147 AF339817	-80638	+	AB464689 EU446571 AF539427 BC025388 BC017585 NM_178861	-309339	-	TSC_hg19_v1_chr13_+_98795717 AB008430 BC065020	-343126	+	AF083420 NM_003576	35451	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	90210	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	90278	-	EU446571|RNF113B|140432|ring finger protein 113B##AF539427|RNF113B|140432|ring finger protein 113B##BC025388|RNF113B|140432|ring finger protein 113B##BC017585|RNF113B|140432|ring finger protein 113B##NM_178861|RNF113B|140432|ring finger protein 113B##AB008430|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##BC065020|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##AF083420|STK24|8428|serine/threonine kinase 24##NM_003576|STK24|8428|serine/threonine kinase 24##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24	1.458774	CTCF.p2:29:0.867	CTCF.p2:95:0.592
chr14	50778601	50778752	reg1041860.p2	3.502	+	AB209277 TSC_hg19_v1_chr14_-_50698111 NM_006939	-80576	-	TSC_hg19_v1_chr14_-_50697940 L13858 HQ258542 AB463275 BC117261 BC143366 BC143367	-80693	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	-195406	-	TSC_hg19_v1_chr14_-_50778948 CU675259 AY757363 BC006117 AK309294 AK022680 AK292627 NM_024884	204	-	TSC_hg19_v1_chr14_+_50779043 BC011549 NM_001003803 NM_001003805 NM_015684 AF052186 U79253	365	+	BC104977 NM_004196	83940	-	AB209277|SOS2|6655|son of sevenless homolog 2 (Drosophila)##NM_006939|SOS2|6655|son of sevenless homolog 2 (Drosophila)##L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)##HQ258542|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D##AY757363|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##BC006117|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AK309294|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AK022680|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##AK292627|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##NM_024884|L2HGDH|79944|L-2-hydroxyglutarate dehydrogenase##BC011549|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_001003803|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_001003805|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##NM_015684|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##AF052186|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##U79253|ATP5S|27109|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit s (factor B)##BC104977|CDKL1|8814|cyclin-dependent kinase-like 1 (CDC2-related kinase)##NM_004196|CDKL1|8814|cyclin-dependent kinase-like 1 (CDC2-related kinase)	0.153612	
chr14	64733096	64733238	reg1041538.p1	3.502	+	NM_182910	-50496	+	NM_182913 AY061758 AK297874	-52290	+	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	-413472	+	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	16496	-	AF051427 AF051428 AF060555 NM_001040275 NM_001437	27935	-	NM_001040276 BX247957 TSC_hg19_v1_chr14_-_64805347	72191	-	NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)##AF051427|ESR2|2100|estrogen receptor 2 (ER beta)##AF051428|ESR2|2100|estrogen receptor 2 (ER beta)##AF060555|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001040275|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001437|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001040276|ESR2|2100|estrogen receptor 2 (ER beta)##BX247957|ESR2|2100|estrogen receptor 2 (ER beta)	0.0	
chr18	46472834	46472971	reg1037554.p1	3.502	+	AK131394 NM_001190823	-3755	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	-407129	+	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	-537193	-	AK301535 NM_001190822	2800	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	3865	-	AF010193 NM_001190821 NM_005904	4178	-	AK131394|SMAD7|4092|SMAD family member 7##NM_001190823|SMAD7|4092|SMAD family member 7##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7	0.0	
chr20	1166542	1166631	reg1034750.p1	3.502	+	AK002052 NM_018354	-1470	-	TSC_hg19_v1_chr20_+_1099244 NM_006814 AK098612 AK294134 D88378 AB590890 HQ258165 AK300667	-67233	+	AK302164 NM_178578 BC126127 BC126462	-72626	+	AK092524 NM_001009612 BC127730 BC127731 BC141955 BC141956 BC150531 BC150532	17546	+	BC157891 BC171911 NM_001136566	40177	+	BC035788 NM_014723 AB002372 AF187733	80392	+	AK002052|TMEM74B|55321|transmembrane protein 74B##NM_018354|TMEM74B|55321|transmembrane protein 74B##NM_006814|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK098612|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK294134|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##D88378|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##HQ258165|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK300667|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK302164|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##NM_178578|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##BC126127|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##BC126462|PSMF1|9491|proteasome (prosome, macropain) inhibitor subunit 1 (PI31)##AK092524|C20orf202|400831|chromosome 20 open reading frame 202##NM_001009612|C20orf202|400831|chromosome 20 open reading frame 202##BC127730|C20orf202|400831|chromosome 20 open reading frame 202##BC127731|C20orf202|400831|chromosome 20 open reading frame 202##BC141955|C20orf202|400831|chromosome 20 open reading frame 202##BC141956|C20orf202|400831|chromosome 20 open reading frame 202##BC150532|C20orf202|400831|chromosome 20 open reading frame 202##BC157891|RAD21L1|642636|RAD21-like 1 (S. pombe)##BC171911|RAD21L1|642636|RAD21-like 1 (S. pombe)##NM_001136566|RAD21L1|642636|RAD21-like 1 (S. pombe)##BC035788|SNPH|9751|syntaphilin##NM_014723|SNPH|9751|syntaphilin##AB002372|SNPH|9751|syntaphilin##AF187733|SNPH|9751|syntaphilin	0.486341	CTCF.p2:-9:0.466
chr20	30623172	30623302	reg1011604.p2	3.502	+	NM_080625 AK057090 BC030254	-24989	+	AY534245 NM_001011718 TSC_hg19_v1_chr20_+_30555960	-67348	+	TSC_hg19_v1_chr20_-_30539856 NM_030815 AY286301	-83366	-	TSC_hg19_v1_chr20_+_30640055 NM_001172129 NM_001172130 NM_001172131 NM_001172132 NM_001172133 NM_002110 AK289896 AK225819 AK290928 AK298726 AK026432 BC108930 BC108931 BC113854 BC114463 AK314335 BC073748 BC094847 BC014435	16809	+	TSC_hg19_v1_chr20_+_30697308 NM_014742	74132	+	TSC_hg19_v1_chr20_+_30697532 AK126534 AK294980 AK296500 AK302439 BC021107 D87444	74304	+	NM_080625|C20orf160|140706|chromosome 20 open reading frame 160##AK057090|C20orf160|140706|chromosome 20 open reading frame 160##BC030254|C20orf160|140706|chromosome 20 open reading frame 160##AY534245|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_001011718|XKR7|343702|XK, Kell blood group complex subunit-related family, member 7##NM_030815|PDRG1|81572|p53 and DNA-damage regulated 1##AY286301|PDRG1|81572|p53 and DNA-damage regulated 1##NM_001172129|HCK|3055|hemopoietic cell kinase##NM_001172130|HCK|3055|hemopoietic cell kinase##NM_001172131|HCK|3055|hemopoietic cell kinase##NM_001172132|HCK|3055|hemopoietic cell kinase##NM_001172133|HCK|3055|hemopoietic cell kinase##NM_002110|HCK|3055|hemopoietic cell kinase##AK289896|HCK|3055|hemopoietic cell kinase##AK225819|HCK|3055|hemopoietic cell kinase##AK290928|HCK|3055|hemopoietic cell kinase##AK298726|HCK|3055|hemopoietic cell kinase##AK026432|HCK|3055|hemopoietic cell kinase##BC108930|HCK|3055|hemopoietic cell kinase##BC108931|HCK|3055|hemopoietic cell kinase##BC113854|HCK|3055|hemopoietic cell kinase##BC114463|HCK|3055|hemopoietic cell kinase##AK314335|HCK|3055|hemopoietic cell kinase##BC073748|HCK|3055|hemopoietic cell kinase##BC094847|HCK|3055|hemopoietic cell kinase##BC014435|HCK|3055|hemopoietic cell kinase##NM_014742|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK126534|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK294980|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK296500|TM9SF4|9777|transmembrane 9 superfamily protein member 4##AK302439|TM9SF4|9777|transmembrane 9 superfamily protein member 4##BC021107|TM9SF4|9777|transmembrane 9 superfamily protein member 4##D87444|TM9SF4|9777|transmembrane 9 superfamily protein member 4	0.017729	
chr20	37650389	37650570	reg1038676.p2	3.502	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-59490	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-95411	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-95490	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1667398	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	2007015	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	2007185	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.0	
chr2	23637862	23637995	reg1033391.p2	3.502	+	NM_052920	-29631	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2370999	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-2371029	-	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	512018	-	TSC_hg19_v1_chr2_+_24150144 BC037901	512229	+	TSC_hg19_v1_chr2_+_24163332 BC092484 AL832079 NM_181713 BC111997 BC093681 BC143298	525443	+	NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A##BC092484|UBXN2A|165324|UBX domain protein 2A##AL832079|UBXN2A|165324|UBX domain protein 2A##NM_181713|UBXN2A|165324|UBX domain protein 2A##BC111997|UBXN2A|165324|UBX domain protein 2A##BC093681|UBXN2A|165324|UBX domain protein 2A##BC143298|UBXN2A|165324|UBX domain protein 2A	0.0	
chr3	10992633	10992740	reg1038269.p2	3.502	+	TSC_hg19_v1_chr3_+_10857912 AK312719 BC036083 NM_014229 S75989 AB527355	-134779	+	L20977 TSC_hg19_v1_chr3_-_10749723	-242964	-	AB210008 TSC_hg19_v1_chr3_-_10547352	-445340	-	NM_003042 TSC_hg19_v1_chr3_+_11034421	41735	+	TSC_hg19_v1_chr3_+_11034439 BC057291 BC033904	41776	+	AK289412 NM_001098213	186092	+	AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##L20977|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC057291|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC033904|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##AK289412|HRH1|3269|histamine receptor H1##NM_001098213|HRH1|3269|histamine receptor H1	0.082382	
chr3	49876943	49877065	reg1000495.p2	3.502	+	TSC_hg19_v1_chr3_-_49851387 NM_003335 L13852	-25615	-	CU675375 BT007026 DQ893307 DQ893707 TSC_hg19_v1_chr3_-_49851326 BC006378	-25733	-	BC012170 NM_203370 TSC_hg19_v1_chr3_+_49840695	-36304	+	AB451320 AB451449 AB590668 CU674148 EF036504 TSC_hg19_v1_chr3_-_49894001 AK225873 BC000310 BC019283 AK292172 NM_005879 U77845 AK295780	16941	-	TSC_hg19_v1_chr3_-_49907340 BC019256 BC000497 BC001921 BC005828 BC017363 AK297437 BX647074 AK299953 AL136697 AK074899 AK297258 AK295588 AK075294 AK074856 NM_024046 AK315525	30341	-	TSC_hg19_v1_chr3_-_49941304 NM_001244937 NM_002447	64298	-	NM_003335|UBA7|7318|ubiquitin-like modifier activating enzyme 7##L13852|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BT007026|UBA7|7318|ubiquitin-like modifier activating enzyme 7##DQ893307|UBA7|7318|ubiquitin-like modifier activating enzyme 7##DQ893707|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BC006378|UBA7|7318|ubiquitin-like modifier activating enzyme 7##BC012170|FAM212A|389119|family with sequence similarity 212, member A##NM_203370|FAM212A|389119|family with sequence similarity 212, member A##AB451320|TRAIP|10293|TRAF interacting protein##AB451449|TRAIP|10293|TRAF interacting protein##EF036504|TRAIP|10293|TRAF interacting protein##AK225873|TRAIP|10293|TRAF interacting protein##BC000310|TRAIP|10293|TRAF interacting protein##BC019283|TRAIP|10293|TRAF interacting protein##AK292172|TRAIP|10293|TRAF interacting protein##NM_005879|TRAIP|10293|TRAF interacting protein##U77845|TRAIP|10293|TRAF interacting protein##AK295780|TRAIP|10293|TRAF interacting protein##BC019256|CAMKV|79012|CaM kinase-like vesicle-associated##BC000497|CAMKV|79012|CaM kinase-like vesicle-associated##BC001921|CAMKV|79012|CaM kinase-like vesicle-associated##BC005828|CAMKV|79012|CaM kinase-like vesicle-associated##BC017363|CAMKV|79012|CaM kinase-like vesicle-associated##AK297437|CAMKV|79012|CaM kinase-like vesicle-associated##BX647074|CAMKV|79012|CaM kinase-like vesicle-associated##AK299953|CAMKV|79012|CaM kinase-like vesicle-associated##AL136697|CAMKV|79012|CaM kinase-like vesicle-associated##AK074899|CAMKV|79012|CaM kinase-like vesicle-associated##AK297258|CAMKV|79012|CaM kinase-like vesicle-associated##AK295588|CAMKV|79012|CaM kinase-like vesicle-associated##AK075294|CAMKV|79012|CaM kinase-like vesicle-associated##AK074856|CAMKV|79012|CaM kinase-like vesicle-associated##NM_024046|CAMKV|79012|CaM kinase-like vesicle-associated##AK315525|CAMKV|79012|CaM kinase-like vesicle-associated##NM_001244937|MST1R|4486|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)##NM_002447|MST1R|4486|macrophage stimulating 1 receptor (c-met-related tyrosine kinase)	0.0	
chr5	150477836	150478007	reg1043339.p2	3.502	+	AK290999 NM_001252390	-10701	-	BC014008 AB252970 AB252971 AB252974 AB252982 AJ011895 AJ011896 AK298685 NM_001252391 NM_001252392	-11200	-	TSC_hg19_v1_chr5_-_150460599 AB252972 AB252973 AB252975 NM_001252385 NM_001252386 NM_001252393 NM_006058 AY012155	-17298	-	AK303078 NM_001193544	43286	-	J03578 BC017046 TSC_hg19_v1_chr5_-_150537299	59360	-	TSC_hg19_v1_chr5_-_150537327 AK126836 AK290672 AK130077 Y00097 AK298582	59398	-	AK290999|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252390|TNIP1|10318|TNFAIP3 interacting protein 1##BC014008|TNIP1|10318|TNFAIP3 interacting protein 1##AB252970|TNIP1|10318|TNFAIP3 interacting protein 1##AB252971|TNIP1|10318|TNFAIP3 interacting protein 1##AB252982|TNIP1|10318|TNFAIP3 interacting protein 1##AJ011895|TNIP1|10318|TNFAIP3 interacting protein 1##AJ011896|TNIP1|10318|TNFAIP3 interacting protein 1##AK298685|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252391|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252392|TNIP1|10318|TNFAIP3 interacting protein 1##AB252972|TNIP1|10318|TNFAIP3 interacting protein 1##AB252973|TNIP1|10318|TNFAIP3 interacting protein 1##AB252975|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252385|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252386|TNIP1|10318|TNFAIP3 interacting protein 1##NM_001252393|TNIP1|10318|TNFAIP3 interacting protein 1##NM_006058|TNIP1|10318|TNFAIP3 interacting protein 1##AY012155|TNIP1|10318|TNFAIP3 interacting protein 1##AK303078|ANXA6|309|annexin A6##NM_001193544|ANXA6|309|annexin A6##J03578|ANXA6|309|annexin A6##BC017046|ANXA6|309|annexin A6##AK126836|ANXA6|309|annexin A6##AK290672|ANXA6|309|annexin A6##AK130077|ANXA6|309|annexin A6##Y00097|ANXA6|309|annexin A6##AK298582|ANXA6|309|annexin A6	0.0	
chr6	108880992	108881077	reg1030881.p1	3.502	+	TSC_hg19_v1_chr6_+_108881027 NM_201559 BC020227 BC021224	-11	+	TSC_hg19_v1_chr6_+_108616194 AF520418 BC018445 NM_145315	-264895	+	TSC_hg19_v1_chr6_-_108582316 NM_003795 NM_152827	-298649	-	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	1041	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	1223	+	TSC_hg19_v1_chr6_+_109169624 AK294574 NM_032131 AK292499 BC030603	288587	+	NM_201559|FOXO3|2309|forkhead box O3##BC020227|FOXO3|2309|forkhead box O3##BC021224|FOXO3|2309|forkhead box O3##AF520418|LACE1|246269|lactation elevated 1##BC018445|LACE1|246269|lactation elevated 1##NM_145315|LACE1|246269|lactation elevated 1##NM_003795|SNX3|8724|sorting nexin 3##NM_152827|SNX3|8724|sorting nexin 3##BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3##AK294574|ARMC2|84071|armadillo repeat containing 2##NM_032131|ARMC2|84071|armadillo repeat containing 2##AK292499|ARMC2|84071|armadillo repeat containing 2##BC030603|ARMC2|84071|armadillo repeat containing 2	0.0	
chr6	12290187	12290367	reg1001216.p4	3.502	+	NM_002114	-277554	+	NM_001143948 NM_032744	-510998	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-751779	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	316	+	TSC_hg19_v1_chr6_+_12514301 D28417	224025	+	AK295263 TSC_hg19_v1_chr6_+_12716998	426666	+	NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1##AK295263|PHACTR1|221692|phosphatase and actin regulator 1	0.019542	
chr6	159288985	159289051	reg1042669.p2	3.502	+	TSC_hg19_v1_chr6_-_159240446 NM_001111077	-48562	-	TSC_hg19_v1_chr6_-_159240401 AK296738	-48605	-	AK312597 TSC_hg19_v1_chr6_-_159240398	-48620	-	NM_001195032	20600	+	TSC_hg19_v1_chr6_-_159420766 BC035675	131751	-	AF353618 AK057655 TSC_hg19_v1_chr6_-_159420825	131801	-	NM_001111077|EZR|7430|ezrin##AK296738|EZR|7430|ezrin##AK312597|EZR|7430|ezrin##NM_001195032|C6orf99|100130967|chromosome 6 open reading frame 99##BC035675|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AF353618|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)##AK057655|RSPH3|83861|radial spoke 3 homolog (Chlamydomonas)	0.0	
chr10	115802942	115803083	reg1031224.p2	3.501	+	TSC_hg19_v1_chr10_+_115614419 NM_198514 AK090631 AX746547	-188593	+	D42045 NM_014881 AK307187	-189096	-	BC037870 FJ236306 NM_182601	-278435	+	NM_000684 J03019	797	+	TSC_hg19_v1_chr10_-_115933963 BC100670 BC103499 BC103504 BC105632 BC152306 BC107430 BC070368 BX537964 AK307517 AK092620 AX747632 BC020842 BC030557	130920	-	NM_018017	131351	-	NM_198514|NHLRC2|374354|NHL repeat containing 2##AK090631|NHLRC2|374354|NHL repeat containing 2##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A##BC037870|C10orf81|79949|chromosome 10 open reading frame 81##FJ236306|C10orf81|79949|chromosome 10 open reading frame 81##NM_182601|C10orf81|79949|chromosome 10 open reading frame 81##NM_000684|ADRB1|153|adrenergic, beta-1-, receptor##J03019|ADRB1|153|adrenergic, beta-1-, receptor##BC100670|C10orf118|55088|chromosome 10 open reading frame 118##BC103499|C10orf118|55088|chromosome 10 open reading frame 118##BC103504|C10orf118|55088|chromosome 10 open reading frame 118##BC105632|C10orf118|55088|chromosome 10 open reading frame 118##BC152306|C10orf118|55088|chromosome 10 open reading frame 118##BC107430|C10orf118|55088|chromosome 10 open reading frame 118##BC070368|C10orf118|55088|chromosome 10 open reading frame 118##BX537964|C10orf118|55088|chromosome 10 open reading frame 118##AK307517|C10orf118|55088|chromosome 10 open reading frame 118##AK092620|C10orf118|55088|chromosome 10 open reading frame 118##BC020842|C10orf118|55088|chromosome 10 open reading frame 118##BC030557|C10orf118|55088|chromosome 10 open reading frame 118##NM_018017|C10orf118|55088|chromosome 10 open reading frame 118	0.0	
chr1	13795933	13796043	reg1038711.p1	3.501	+	NM_001100114	-53187	+	NM_001099852	-59082	+	NM_001099851 BC144662 BC146858	-79899	+	BC016048 NM_001010847	44211	-	NM_006474 NM_198389 BC014668 BC022812 TSC_hg19_v1_chr1_+_13910326 AY194238 AK075327 AK075345 AK312607 AF390106 AF030428 AJ225022 AB127958	114401	+	NM_001006624 NM_001006625	115978	+	NM_001100114|PRAMEF21|391001|PRAME family member 21##NM_001099852|PRAMEF20|645425|PRAME family member 20##NM_001099851|PRAMEF17|391004|PRAME family member 17##BC144662|PRAMEF17|391004|PRAME family member 17##BC146858|PRAMEF17|391004|PRAME family member 17##BC016048|LRRC38|126755|leucine rich repeat containing 38##NM_001010847|LRRC38|126755|leucine rich repeat containing 38##NM_006474|PDPN|10630|podoplanin##NM_198389|PDPN|10630|podoplanin##BC014668|PDPN|10630|podoplanin##BC022812|PDPN|10630|podoplanin##AY194238|PDPN|10630|podoplanin##AK075327|PDPN|10630|podoplanin##AK075345|PDPN|10630|podoplanin##AK312607|PDPN|10630|podoplanin##AF390106|PDPN|10630|podoplanin##AF030428|PDPN|10630|podoplanin##AJ225022|PDPN|10630|podoplanin##AB127958|PDPN|10630|podoplanin##NM_001006624|PDPN|10630|podoplanin##NM_001006625|PDPN|10630|podoplanin	0.559687	CTCF.p2:-8:0.560
chr1	176176856	176176979	reg1034826.p1	3.501	+	AF527539 TSC_hg19_v1_chr1_-_176176377	-541	-	TSC_hg19_v1_chr1_-_176176372 BC094728 NM_001001740 NM_022457	-548	-	TSC_hg19_v1_chr1_-_176176313 BC020845 AK314750	-599	-	AF342989 AF342990 BC062665 BC104644 NM_020318 NM_021936 BC152552	255395	+	BC142697 AB006627 BC146795 TSC_hg19_v1_chr1_-_177133827	956908	-	AK307820 AK295126 BC032870 BC049377 TSC_hg19_v1_chr1_-_177134004 NM_004319 NM_207108	957069	-	AF527539|RFWD2|64326|ring finger and WD repeat domain 2##BC094728|RFWD2|64326|ring finger and WD repeat domain 2##NM_001001740|RFWD2|64326|ring finger and WD repeat domain 2##NM_022457|RFWD2|64326|ring finger and WD repeat domain 2##BC020845|RFWD2|64326|ring finger and WD repeat domain 2##AK314750|RFWD2|64326|ring finger and WD repeat domain 2##AF342989|PAPPA2|60676|pappalysin 2##AF342990|PAPPA2|60676|pappalysin 2##BC062665|PAPPA2|60676|pappalysin 2##BC104644|PAPPA2|60676|pappalysin 2##NM_020318|PAPPA2|60676|pappalysin 2##NM_021936|PAPPA2|60676|pappalysin 2##BC152552|PAPPA2|60676|pappalysin 2##BC142697|ASTN1|460|astrotactin 1##AB006627|ASTN1|460|astrotactin 1##BC146795|ASTN1|460|astrotactin 1##AK307820|ASTN1|460|astrotactin 1##AK295126|ASTN1|460|astrotactin 1##BC032870|ASTN1|460|astrotactin 1##BC049377|ASTN1|460|astrotactin 1##NM_004319|ASTN1|460|astrotactin 1##NM_207108|ASTN1|460|astrotactin 1	0.0	
chr1	229694633	229694807	reg1034285.p1	3.501	+	TSC_hg19_v1_chr1_-_229694431 AB013380 BC064930 AF216833 NM_012089	-292	-	TSC_hg19_v1_chr1_-_229644079 AK001676 NM_018230 AK304061	-50620	-	AB384686 DQ894268 EU176236 AK092339 AK314431 AX747487 TSC_hg19_v1_chr1_-_229644075 BC020107 AK304861	-50685	-	BC041094 TSC_hg19_v1_chr1_-_229761747	67025	-	NM_001025247 NM_014409 TSC_hg19_v1_chr1_-_229761804	67078	-	AK291013 TSC_hg19_v1_chr1_+_229761973 D50923 NM_014777 BC059381	67254	+	AB013380|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##BC064930|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##AF216833|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##NM_012089|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##AK001676|NUP133|55746|nucleoporin 133kDa##NM_018230|NUP133|55746|nucleoporin 133kDa##AK304061|NUP133|55746|nucleoporin 133kDa##DQ894268|NUP133|55746|nucleoporin 133kDa##EU176236|NUP133|55746|nucleoporin 133kDa##AK092339|NUP133|55746|nucleoporin 133kDa##AK314431|NUP133|55746|nucleoporin 133kDa##BC020107|NUP133|55746|nucleoporin 133kDa##AK304861|NUP133|55746|nucleoporin 133kDa##BC041094|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_001025247|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_014409|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK291013|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##D50923|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_014777|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC059381|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	0.171089	
chr12	60013302	60013440	reg1037043.p2	3.501	+	BC007463 TSC_hg19_v1_chr12_+_59989852 AF049608	-23454	+	AK292857 TSC_hg19_v1_chr12_-_59314301	-699069	-	AY505340 BC126169 BC126171 BC143960 AY358288 NM_153377 TSC_hg19_v1_chr12_-_59314272	-699194	-	BC030693 NM_004731 AK301725 AK310281 AK313345 AF058056	69768	+	BC050347 NM_178539	2573212	-	NM_001252078 NM_001252079 NM_006313 AF153604 TSC_hg19_v1_chr12_+_62654184 AK292337 AK023703 BC063454 AK297759 BC020688 AF106069 BC125123 BC110908 AK295947 AB011101 AF013990	2640813	+	BC007463|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF049608|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC030693|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##NM_004731|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK301725|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK310281|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AK313345|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##AF058056|SLC16A7|9194|solute carrier family 16, member 7 (monocarboxylic acid transporter 2)##BC050347|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_178539|FAM19A2|338811|family with sequence similarity 19 (chemokine (C-C motif)-like), member A2##NM_001252078|USP15|9958|ubiquitin specific peptidase 15##NM_001252079|USP15|9958|ubiquitin specific peptidase 15##NM_006313|USP15|9958|ubiquitin specific peptidase 15##AF153604|USP15|9958|ubiquitin specific peptidase 15##AK292337|USP15|9958|ubiquitin specific peptidase 15##AK023703|USP15|9958|ubiquitin specific peptidase 15##BC063454|USP15|9958|ubiquitin specific peptidase 15##AK297759|USP15|9958|ubiquitin specific peptidase 15##BC020688|USP15|9958|ubiquitin specific peptidase 15##AF106069|USP15|9958|ubiquitin specific peptidase 15##BC125123|USP15|9958|ubiquitin specific peptidase 15##BC110908|USP15|9958|ubiquitin specific peptidase 15##AK295947|USP15|9958|ubiquitin specific peptidase 15##AB011101|USP15|9958|ubiquitin specific peptidase 15##AF013990|USP15|9958|ubiquitin specific peptidase 15	0.0	
chr17	5210742	5210900	reg1046458.p1	3.501	+	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	-25155	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	-72720	-	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-115441	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	112104	-	AY775314 AY775315 AY775316 AY775317 AY775318 AY775319 AY775320 AY775321 AY775323 NM_001033002 NM_001160243 NM_001160244 NM_001160246 NM_001160266 NM_001160267	112139	+	TSC_hg19_v1_chr17_-_5322983 NM_002532	112199	-	NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa##AY775314|RPAIN|84268|RPA interacting protein##AY775315|RPAIN|84268|RPA interacting protein##AY775316|RPAIN|84268|RPA interacting protein##AY775317|RPAIN|84268|RPA interacting protein##AY775318|RPAIN|84268|RPA interacting protein##AY775319|RPAIN|84268|RPA interacting protein##AY775320|RPAIN|84268|RPA interacting protein##AY775321|RPAIN|84268|RPA interacting protein##AY775323|RPAIN|84268|RPA interacting protein##NM_001033002|RPAIN|84268|RPA interacting protein##NM_001160243|RPAIN|84268|RPA interacting protein##NM_001160244|RPAIN|84268|RPA interacting protein##NM_001160246|RPAIN|84268|RPA interacting protein##NM_001160266|RPAIN|84268|RPA interacting protein##NM_001160267|RPAIN|84268|RPA interacting protein##NM_002532|NUP88|4927|nucleoporin 88kDa	0.284152	CTCF.p2:15:0.284
chr17	81009219	81009329	reg1029364.p1	3.501	+	BC041588 TSC_hg19_v1_chr17_-_81006463 BC019623	-2804	-	BC109036 BC109037 AK301690 AK023903 NM_024702	-211365	-	TSC_hg19_v1_chr17_+_80710051 AJ006417 DQ891885 EU176650	-299226	+	TSC_hg19_v1_chr17_-_81009643 AY304503 AY634364 NM_001009905	395	-	TSC_hg19_v1_chr17_+_81037508 BC082252 NM_001004431 BC118558 BC118638	28268	+	None	None	None	BC041588|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC019623|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC109036|ZNF750|79755|zinc finger protein 750##BC109037|ZNF750|79755|zinc finger protein 750##AK301690|ZNF750|79755|zinc finger protein 750##AK023903|ZNF750|79755|zinc finger protein 750##NM_024702|ZNF750|79755|zinc finger protein 750##AJ006417|TBCD|6904|tubulin folding cofactor D##DQ891885|TBCD|6904|tubulin folding cofactor D##EU176650|TBCD|6904|tubulin folding cofactor D##AY304503|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##AY634364|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##NM_001009905|B3GNTL1|146712|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1##BC082252|METRNL|284207|meteorin, glial cell differentiation regulator-like##NM_001004431|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118558|METRNL|284207|meteorin, glial cell differentiation regulator-like##BC118638|METRNL|284207|meteorin, glial cell differentiation regulator-like	0.054299	
chr2	11829287	11829375	reg1014664.p2	3.501	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-19040	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-146488	+	TSC_hg19_v1_chr2_+_11682798 BC071853	-146530	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	57444	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	1027922	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	1028585	+	AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC071853|GREB1|9687|growth regulation by estrogen in breast cancer 1##BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.0	
chr4	115101990	115102060	reg1008752.p2	3.501	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-201186	-	TSC_hg19_v1_chr4_-_114682923 NM_001221 NM_172114 NM_172115 NM_172127 NM_172128 NM_172129	-419055	-	TSC_hg19_v1_chr4_-_114682619 AK055642 AB209288	-419369	-	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	417558	+	NM_003360 U30930	441497	+	BC113075 BC012326 AK289670 AB036429 NM_022569	932956	-	AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##NM_001221|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172114|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172115|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172127|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172128|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##NM_172129|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK055642|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AB209288|CAMK2D|817|calcium/calmodulin-dependent protein kinase II delta##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4	0.0	
chr7	156922866	156922999	reg1042633.p1	3.501	+	BC022831 BC033117 TSC_hg19_v1_chr7_+_156803613	-119326	+	AF107457 TSC_hg19_v1_chr7_-_156803355 NM_005515	-119637	-	X56537 TSC_hg19_v1_chr7_-_156802679	-120316	-	BC026241 TSC_hg19_v1_chr7_+_156931628	8687	+	TSC_hg19_v1_chr7_+_156931631 NM_014671	8714	+	D13635 TSC_hg19_v1_chr7_+_156931668 BC014029	8751	+	BC022831|LOC645249|645249|uncharacterized LOC645249##BC033117|LOC645249|645249|uncharacterized LOC645249##AF107457|MNX1|3110|motor neuron and pancreas homeobox 1##NM_005515|MNX1|3110|motor neuron and pancreas homeobox 1##X56537|MNX1|3110|motor neuron and pancreas homeobox 1##BC026241|UBE3C|9690|ubiquitin protein ligase E3C##NM_014671|UBE3C|9690|ubiquitin protein ligase E3C##D13635|UBE3C|9690|ubiquitin protein ligase E3C##BC014029|UBE3C|9690|ubiquitin protein ligase E3C	0.0	
chr9	139981859	139981925	reg1036794.p1	3.501	+	TSC_hg19_v1_chr9_+_139981532 AK299043 AK298480 AK309808 CR749534	-363	+	AK315797 BC006079 TSC_hg19_v1_chr9_+_139981436 BC002953 CU675227 DQ891861 DQ895050 AF145732	-444	+	TSC_hg19_v1_chr9_+_139981431 AY358465	-464	+	AK298288 TSC_hg19_v1_chr9_-_140008972	27093	-	TSC_hg19_v1_chr9_-_140009160 AB209787	27267	-	TSC_hg19_v1_chr9_-_140009166 AF154502	27272	-	AK299043|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AK298480|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AK309808|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##CR749534|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AK315797|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##BC006079|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##BC002953|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##DQ891861|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##DQ895050|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AF145732|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AY358465|MAN1B1|11253|mannosidase, alpha, class 1B, member 1##AK298288|DPP7|29952|dipeptidyl-peptidase 7##AB209787|DPP7|29952|dipeptidyl-peptidase 7##AF154502|DPP7|29952|dipeptidyl-peptidase 7	0.0	
chrX	64888085	64888194	reg1019638.p3	3.501	+	TSC_hg19_v1_chrX_+_64887602 AK309986 M69066 AF295356 DQ892653 DQ895892	-491	+	TSC_hg19_v1_chrX_+_64887542 BC001112 BC011827 BC017293	-592	+	NM_002444 TSC_hg19_v1_chrX_+_64887520	-622	+	TSC_hg19_v1_chrX_+_65235302 DQ680071 DQ680072	347152	+	DQ891770 DQ894953 BC010525 AJ132502 AK293215 AK298389 AK075153 AK297050 AK301417 AK075171 NM_001100431 NM_001184830 NM_001184831 NM_007268	371763	-	NM_138737 TSC_hg19_v1_chrX_+_65382512	494336	+	AK309986|MSN|4478|moesin##M69066|MSN|4478|moesin##DQ892653|MSN|4478|moesin##DQ895892|MSN|4478|moesin##BC001112|MSN|4478|moesin##BC011827|MSN|4478|moesin##BC017293|MSN|4478|moesin##NM_002444|MSN|4478|moesin##DQ891770|VSIG4|11326|V-set and immunoglobulin domain containing 4##DQ894953|VSIG4|11326|V-set and immunoglobulin domain containing 4##BC010525|VSIG4|11326|V-set and immunoglobulin domain containing 4##AJ132502|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK293215|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK298389|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075153|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK297050|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK301417|VSIG4|11326|V-set and immunoglobulin domain containing 4##AK075171|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001100431|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184830|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_001184831|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_007268|VSIG4|11326|V-set and immunoglobulin domain containing 4##NM_138737|HEPH|9843|hephaestin	0.028605	
chr11	102238236	102238377	reg1040930.p2	3.500	+	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	-20278	+	TSC_hg19_v1_chr11_+_102217944 AK303197	-20377	+	NM_001165 NM_182962 TSC_hg19_v1_chr11_+_102188214 AF070674	-50104	+	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	85307	-	AB528509 CU678546 DQ893132 EU176770 TSC_hg19_v1_chr11_-_102401479 X07819 Z11887 BC003635 AK293359 NM_002423 AK309687 AK222980	163153	-	AB527354 NM_004771 Y12779	257749	-	BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##AK303197|BIRC2|329|baculoviral IAP repeat containing 2##NM_001165|BIRC3|330|baculoviral IAP repeat containing 3##NM_182962|BIRC3|330|baculoviral IAP repeat containing 3##AF070674|BIRC3|330|baculoviral IAP repeat containing 3##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123##DQ893132|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##EU176770|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##X07819|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##Z11887|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##BC003635|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK293359|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_002423|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK309687|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##AK222980|MMP7|4316|matrix metallopeptidase 7 (matrilysin, uterine)##NM_004771|MMP20|9313|matrix metallopeptidase 20##Y12779|MMP20|9313|matrix metallopeptidase 20	0.998411	CTCF.p2:-41:0.998
chr11	35713533	35713599	reg1041796.p1	3.500	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-28893	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-29116	+	TSC_hg19_v1_chr11_+_35684404 BC013166 NM_017583	-29193	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	252045	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	597387	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	597420	-	DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##BC013166|TRIM44|54765|tripartite motif containing 44##NM_017583|TRIM44|54765|tripartite motif containing 44##BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9	0.0	
chr1	15530389	15530516	reg1044698.p1	3.500	+	TSC_hg19_v1_chr1_+_15480249 AK001061 NM_001136218 NM_018022 BC000593 BC005177 AK098467	-50204	+	AK129922 TSC_hg19_v1_chr1_+_15479310	-51148	+	AK292184 NM_001136216 NM_001136217 TSC_hg19_v1_chr1_+_15479047	-51421	+	AK057963 NM_052929	43315	+	TSC_hg19_v1_chr1_+_15736390 NM_024329	205948	+	BC068473 TSC_hg19_v1_chr1_+_15736425 BC007233 BC014923 BC023611	205983	+	AK001061|TMEM51|55092|transmembrane protein 51##NM_001136218|TMEM51|55092|transmembrane protein 51##NM_018022|TMEM51|55092|transmembrane protein 51##BC000593|TMEM51|55092|transmembrane protein 51##BC005177|TMEM51|55092|transmembrane protein 51##AK098467|TMEM51|55092|transmembrane protein 51##AK129922|TMEM51|55092|transmembrane protein 51##AK292184|TMEM51|55092|transmembrane protein 51##NM_001136216|TMEM51|55092|transmembrane protein 51##NM_001136217|TMEM51|55092|transmembrane protein 51##AK057963|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##NM_052929|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##NM_024329|EFHD2|79180|EF-hand domain family, member D2##BC068473|EFHD2|79180|EF-hand domain family, member D2##BC007233|EFHD2|79180|EF-hand domain family, member D2##BC014923|EFHD2|79180|EF-hand domain family, member D2##BC023611|EFHD2|79180|EF-hand domain family, member D2	0.412151	CTCF.p2:30:0.412
chr1	229979653	229979756	reg1036414.p1	3.500	+	TSC_hg19_v1_chr1_+_229761993 BC114559 BC114963	-217690	+	AK291013 TSC_hg19_v1_chr1_+_229761973 D50923 NM_014777 BC059381	-217730	+	NM_001025247 NM_014409 TSC_hg19_v1_chr1_-_229761804	-217906	-	TSC_hg19_v1_chr1_+_230202957 BC041120 NM_004481	223238	+	TSC_hg19_v1_chr1_+_230203016 AK296886 AK290048 AK304029 AB591001 X85019	223292	+	BC150638 NM_024554	533686	-	BC114559|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC114963|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##AK291013|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##D50923|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_014777|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC059381|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_001025247|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_014409|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##BC041120|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##NM_004481|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK296886|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK290048|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##AK304029|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##X85019|GALNT2|2590|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)##BC150638|PGBD5|79605|piggyBac transposable element derived 5##NM_024554|PGBD5|79605|piggyBac transposable element derived 5	0.0	
chr12	98618650	98618768	reg1037435.p1	3.500	+	BC027605 NM_001135175	-1317466	+	AK290058 NM_001135176 NM_001135177 NM_152905 TSC_hg19_v1_chr12_+_97301000 BC026168 AK303656 AK315821 AL832466 BC020799 AK093221 AX747997	-1317678	+	TSC_hg19_v1_chr12_-_96794341 AK290011 AK315214 NM_001170464 NM_002595	-1824392	-	TSC_hg19_v1_chr12_-_98897622 AK126817	278918	-	TSC_hg19_v1_chr12_+_98909388 NM_001032283 NM_001032284 NM_003276 BC050383 BC053675	290658	+	TSC_hg19_v1_chr12_+_98909409 U09087 U09088 AF070631	290698	+	BC027605|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135175|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290058|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135176|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_001135177|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##NM_152905|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC026168|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK303656|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK315821|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AL832466|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##BC020799|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK093221|NEDD1|121441|neural precursor cell expressed, developmentally down-regulated 1##AK290011|CDK17|5128|cyclin-dependent kinase 17##AK315214|CDK17|5128|cyclin-dependent kinase 17##NM_001170464|CDK17|5128|cyclin-dependent kinase 17##NM_002595|CDK17|5128|cyclin-dependent kinase 17##AK126817|LOC643770|643770|uncharacterized LOC643770##NM_001032283|TMPO|7112|thymopoietin##NM_001032284|TMPO|7112|thymopoietin##NM_003276|TMPO|7112|thymopoietin##BC050383|TMPO|7112|thymopoietin##BC053675|TMPO|7112|thymopoietin##U09087|TMPO|7112|thymopoietin##U09088|TMPO|7112|thymopoietin##AF070631|TMPO|7112|thymopoietin	0.0	
chr14	96195860	96195948	reg1042080.p2	3.500	+	CR456796 DQ892500 DQ895713 BC003574 BC003574 BC005831 BC005831 X82240 X82240 BC014024 BC014024 NM_001098725 NM_021966	-15437	-	BC051000 NM_004918 AF137027 AB018563 AF110466 BC041616 AB590931 CR457087	-43126	+	TSC_hg19_v1_chr14_+_96001402 DQ083331	-194471	+	AK023027 TSC_hg19_v1_chr14_+_96342762	146841	+	TSC_hg19_v1_chr14_+_96505698 NM_001252507 BC043593 AB621830 AK001590	309742	+	CR749338 U35875 TSC_hg19_v1_chr14_+_96671131 NM_000623	475173	+	CR456796|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ892500|TCL1A|8115|T-cell leukemia/lymphoma 1A##DQ895713|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC003574|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC005831|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##X82240|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC014024|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_001098725|TCL1A|8115|T-cell leukemia/lymphoma 1A##NM_021966|TCL1A|8115|T-cell leukemia/lymphoma 1A##BC051000|TCL1B|9623|T-cell leukemia/lymphoma 1B##NM_004918|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF137027|TCL1B|9623|T-cell leukemia/lymphoma 1B##AB018563|TCL1B|9623|T-cell leukemia/lymphoma 1B##AF110466|TCL1B|9623|T-cell leukemia/lymphoma 1B##BC041616|TCL1B|9623|T-cell leukemia/lymphoma 1B##CR457087|TCL1B|9623|T-cell leukemia/lymphoma 1B##DQ083331|GLRX5|51218|glutaredoxin 5##AK023027|LOC100507043|100507043|uncharacterized LOC100507043##NM_001252507|C14orf132|56967|chromosome 14 open reading frame 132##BC043593|C14orf132|56967|chromosome 14 open reading frame 132##AB621830|C14orf132|56967|chromosome 14 open reading frame 132##AK001590|C14orf132|56967|chromosome 14 open reading frame 132##CR749338|BDKRB2|624|bradykinin receptor B2##NM_000623|BDKRB2|624|bradykinin receptor B2	0.0	
chr16	33403443	33403521	reg1042218.p1	3.500	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-141349	+	AL133588 NM_016212	-141968	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-197884	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	13251790	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	13251824	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	13319580	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	0.0	
chr17	20020344	20020502	reg1001888.p2	3.500	+	AY816328 AY816329 NM_001033553 NM_152904 AB041533	-30089	+	TSC_hg19_v1_chr17_+_19976949 AK314341	-43521	+	TSC_hg19_v1_chr17_+_19912678 AK094274 NM_001243439 AK295093	-107755	+	TSC_hg19_v1_chr17_+_20059384 NM_001033554 NM_001033555 NM_001243438 AK301318 AK304186 AY816326 AY816327 BC021123 BC050058	38911	+	BC033618 TSC_hg19_v1_chr17_+_20108434 AK298601	88011	+	TSC_hg19_v1_chr17_+_20224469 BC036241	204043	+	AY816328|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816329|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033553|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_152904|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AB041533|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK314341|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001243439|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK295093|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033554|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001033555|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##NM_001243438|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK301318|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK304186|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816326|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AY816327|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC021123|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC050058|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC033618|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##AK298601|SPECC1|92521|sperm antigen with calponin homology and coiled-coil domains 1##BC036241|CCDC144C|348254|coiled-coil domain containing 144C	0.0	
chr17	62503646	62503762	reg1038537.p1	3.500	+	TSC_hg19_v1_chr17_+_62503186 AL832822	-511	+	TSC_hg19_v1_chr17_+_62503108 AK316257 AK290587 AK297409 BC009518 NM_138363	-580	+	TSC_hg19_v1_chr17_+_62502879 AK057326	-800	+	AF310676 AB385561 AF301463 BC051283 BC093876 BC111945 TSC_hg19_v1_chr17_-_62658136	154363	-	TSC_hg19_v1_chr17_-_62658187 AY014180	154478	-	TSC_hg19_v1_chr17_-_62658414 CR936721 NM_022739	154661	-	AL832822|CEP95|90799|centrosomal protein 95kDa##AK316257|CEP95|90799|centrosomal protein 95kDa##AK290587|CEP95|90799|centrosomal protein 95kDa##AK297409|CEP95|90799|centrosomal protein 95kDa##BC009518|CEP95|90799|centrosomal protein 95kDa##NM_138363|CEP95|90799|centrosomal protein 95kDa##AK057326|CEP95|90799|centrosomal protein 95kDa##AF310676|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AF301463|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC051283|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC093876|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##BC111945|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##AY014180|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##CR936721|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2##NM_022739|SMURF2|64750|SMAD specific E3 ubiquitin protein ligase 2	0.772139	CTCF.p2:6:0.772
chr19	2609723	2609829	reg1037786.p2	3.500	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-133538	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-152816	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-152840	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	92919	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	92966	-	AK124445 TSC_hg19_v1_chr19_-_2717420	107573	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr2	740614	740795	reg1042991.p2	3.500	+	TSC_hg19_v1_chr2_-_677406 BC016010 AL137269 NM_152834	-63293	-	BC033490 NM_001002919	-452460	-	TSC_hg19_v1_chr2_+_264946 NM_001040649 NM_004300 NM_007099 AK289934 M83653 BC020699 AK291861 BC007422 AB209838 BC106011 AB385551 BT007136 Y16846 M83654 M87546 S62885	-475792	+	TSC_hg19_v1_chr2_+_946534 BC035783 NM_018968 AJ003029 BC125251	205875	+	BC063107 NM_000547 NM_001206744 NM_001206745 NM_175719 BC095448 M17755 J02969 J02970 X17358 Y00406	676551	+	NM_175721 NM_175722 AF439430 CU687644	677475	+	BC016010|TMEM18|129787|transmembrane protein 18##AL137269|TMEM18|129787|transmembrane protein 18##NM_152834|TMEM18|129787|transmembrane protein 18##BC033490|FAM150B|285016|family with sequence similarity 150, member B##NM_001002919|FAM150B|285016|family with sequence similarity 150, member B##NM_001040649|ACP1|52|acid phosphatase 1, soluble##NM_004300|ACP1|52|acid phosphatase 1, soluble##NM_007099|ACP1|52|acid phosphatase 1, soluble##AK289934|ACP1|52|acid phosphatase 1, soluble##M83653|ACP1|52|acid phosphatase 1, soluble##BC020699|ACP1|52|acid phosphatase 1, soluble##AK291861|ACP1|52|acid phosphatase 1, soluble##BC007422|ACP1|52|acid phosphatase 1, soluble##AB209838|ACP1|52|acid phosphatase 1, soluble##BC106011|ACP1|52|acid phosphatase 1, soluble##BT007136|ACP1|52|acid phosphatase 1, soluble##Y16846|ACP1|52|acid phosphatase 1, soluble##M83654|ACP1|52|acid phosphatase 1, soluble##M87546|ACP1|52|acid phosphatase 1, soluble##S62885|ACP1|52|acid phosphatase 1, soluble##BC035783|SNTG2|54221|syntrophin, gamma 2##NM_018968|SNTG2|54221|syntrophin, gamma 2##AJ003029|SNTG2|54221|syntrophin, gamma 2##BC125251|SNTG2|54221|syntrophin, gamma 2##BC063107|TPO|7173|thyroid peroxidase##NM_000547|TPO|7173|thyroid peroxidase##NM_001206744|TPO|7173|thyroid peroxidase##NM_001206745|TPO|7173|thyroid peroxidase##NM_175719|TPO|7173|thyroid peroxidase##BC095448|TPO|7173|thyroid peroxidase##M17755|TPO|7173|thyroid peroxidase##J02969|TPO|7173|thyroid peroxidase##J02970|TPO|7173|thyroid peroxidase##X17358|TPO|7173|thyroid peroxidase##Y00406|TPO|7173|thyroid peroxidase##NM_175721|TPO|7173|thyroid peroxidase##NM_175722|TPO|7173|thyroid peroxidase##AF439430|TPO|7173|thyroid peroxidase	0.0	
chr5	108527118	108527245	reg1044862.p1	3.500	+	TSC_hg19_v1_chr5_+_108084650 AK299855 BC058030	-442509	+	AK293376 J03358 NM_005246 AK296874	-443619	+	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	-463201	-	BC030826 AB007898 TSC_hg19_v1_chr5_-_108745619 AK291759 NM_014819	218440	-	TSC_hg19_v1_chr5_+_109025072 BC031659	497883	+	TSC_hg19_v1_chr5_+_109025096 BC111062	497916	+	AK299855|FER|2241|fer (fps/fes related) tyrosine kinase##BC058030|FER|2241|fer (fps/fes related) tyrosine kinase##AK293376|FER|2241|fer (fps/fes related) tyrosine kinase##J03358|FER|2241|fer (fps/fes related) tyrosine kinase##NM_005246|FER|2241|fer (fps/fes related) tyrosine kinase##AK296874|FER|2241|fer (fps/fes related) tyrosine kinase##AB593118|HP07349|100652853|uncharacterized protein HP07349##BC030826|PJA2|9867|praja ring finger 2##AB007898|PJA2|9867|praja ring finger 2##AK291759|PJA2|9867|praja ring finger 2##NM_014819|PJA2|9867|praja ring finger 2##BC031659|MAN2A1|4124|mannosidase, alpha, class 2A, member 1	0.0	
chr5	129370393	129370514	reg1039288.p1	3.500	+	BC137325 AB086062 AB175496 AJ632296 AJ862728 NM_175856	-129966	+	TSC_hg19_v1_chr5_+_128796007 AJ311904 NM_133638	-574400	+	TSC_hg19_v1_chr5_+_128430443 AF151869 NM_016048 AK025787 BC014105 DQ895427 BC008367	-940028	+	CR457048 TSC_hg19_v1_chr5_-_130500958 BC001287 U27143 AK026557	1130478	-	TSC_hg19_v1_chr5_-_130500994 BC028300 BC007090	1130537	-	TSC_hg19_v1_chr5_-_130501019 NM_005340	1130590	-	BC137325|CHSY3|337876|chondroitin sulfate synthase 3##AB086062|CHSY3|337876|chondroitin sulfate synthase 3##AB175496|CHSY3|337876|chondroitin sulfate synthase 3##AJ632296|CHSY3|337876|chondroitin sulfate synthase 3##AJ862728|CHSY3|337876|chondroitin sulfate synthase 3##NM_175856|CHSY3|337876|chondroitin sulfate synthase 3##AJ311904|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##NM_133638|ADAMTS19|171019|ADAM metallopeptidase with thrombospondin type 1 motif, 19##AF151869|ISOC1|51015|isochorismatase domain containing 1##NM_016048|ISOC1|51015|isochorismatase domain containing 1##AK025787|ISOC1|51015|isochorismatase domain containing 1##BC014105|ISOC1|51015|isochorismatase domain containing 1##DQ895427|ISOC1|51015|isochorismatase domain containing 1##BC008367|ISOC1|51015|isochorismatase domain containing 1##CR457048|HINT1|3094|histidine triad nucleotide binding protein 1##BC001287|HINT1|3094|histidine triad nucleotide binding protein 1##U27143|HINT1|3094|histidine triad nucleotide binding protein 1##AK026557|HINT1|3094|histidine triad nucleotide binding protein 1##BC028300|HINT1|3094|histidine triad nucleotide binding protein 1##BC007090|HINT1|3094|histidine triad nucleotide binding protein 1##NM_005340|HINT1|3094|histidine triad nucleotide binding protein 1	0.0	
chr6	138611088	138611206	reg1031056.p2	3.500	+	BC069109 NM_021635 AF189269 AF189270	-71521	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	-128011	+	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	-182579	-	TSC_hg19_v1_chr6_+_138725355 NM_014320 AF117616 BC016806 BC016807 AK057928 AY427823	114238	+	BC010290 TSC_hg19_v1_chr6_+_138725477 BC008205 BC093037 AF411610	114398	+	AK307584 NM_001144060 TSC_hg19_v1_chr6_-_138820579	209431	-	BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##NM_014320|HEBP2|23593|heme binding protein 2##AF117616|HEBP2|23593|heme binding protein 2##BC016806|HEBP2|23593|heme binding protein 2##BC016807|HEBP2|23593|heme binding protein 2##AK057928|HEBP2|23593|heme binding protein 2##AY427823|HEBP2|23593|heme binding protein 2##BC010290|HEBP2|23593|heme binding protein 2##BC008205|HEBP2|23593|heme binding protein 2##BC093037|HEBP2|23593|heme binding protein 2##AF411610|HEBP2|23593|heme binding protein 2##AK307584|NHSL1|57224|NHS-like 1##NM_001144060|NHSL1|57224|NHS-like 1	0.907883	CTCF.p2:-16:0.908
chr6	149069173	149069239	reg1008742.p3	3.500	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-997	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-405015	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-405216	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	569897	+	AK315038 NM_015093 AK307650	570235	+	AY340238 NM_001002255 BC130305 HQ258040	652302	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr7	4681832	4681954	reg1036498.p1	3.500	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	-1340894	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	-1598431	-	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-1798085	-	TSC_hg19_v1_chr7_+_4721925 NM_001037165	39945	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	40358	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	133368	+	AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_001037165|FOXK1|221937|forkhead box K1##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415	0.150729	
chr7	7986808	7986886	reg1040274.p2	3.500	+	BC009868 NM_002947	-228610	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-306474	+	BT007320 AB464142 TSC_hg19_v1_chr7_-_7680067 L07493 BC005264 AK311842	-306760	-	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	21586	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	314869	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	314944	-	BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##BT007320|RPA3|6119|replication protein A3, 14kDa##L07493|RPA3|6119|replication protein A3, 14kDa##BC005264|RPA3|6119|replication protein A3, 14kDa##AK311842|RPA3|6119|replication protein A3, 14kDa##NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr9	45729140	45729299	reg1036195.p1	3.500	+	TSC_hg19_v1_chr9_+_45441926 BC006438	-287293	+	TSC_hg19_v1_chr9_+_43684876 NM_001201380	-2044376	+	NM_001145196	-2098490	-	BC040528 NM_001113541 NM_015667	19780390	-	CR627148 TSC_hg19_v1_chr9_+_66457301 BC039680	20728082	+	TSC_hg19_v1_chr9_-_66458549 BC065527 BC011779	20729277	-	BC006438|LOC100132167|100132167|uncharacterized LOC100132167##NM_001201380|CNTNAP3B|728577|contactin associated protein-like 3B##NM_001145196|FAM75A6|389730|family with sequence similarity 75, member A6##BC040528|FAM75A7|26165|family with sequence similarity 75, member A7##NM_001113541|FAM75A5|727905|family with sequence similarity 75, member A5##NM_015667|FAM75A7|26165|family with sequence similarity 75, member A7	0.0	
chr9	99984481	99984555	reg1033956.p2	3.500	+	AK312806 NM_001201575	-182594	-	AF070448 BC023504 Y14734 AB001928 AK310645 AK310740 BC110512 AY358641 NM_001333	-183040	-	TSC_hg19_v1_chr9_-_99775872 BC005058	-208618	-	NM_020893 CR749320	85420	+	TSC_hg19_v1_chr9_+_100174364 NM_014290 BC028694	189755	+	TSC_hg19_v1_chr9_+_100174377 AK294488 AK314853	189861	+	AK312806|CTSL2|1515|cathepsin L2##NM_001201575|CTSL2|1515|cathepsin L2##AF070448|CTSL2|1515|cathepsin L2##BC023504|CTSL2|1515|cathepsin L2##Y14734|CTSL2|1515|cathepsin L2##AB001928|CTSL2|1515|cathepsin L2##AK310645|CTSL2|1515|cathepsin L2##AK310740|CTSL2|1515|cathepsin L2##BC110512|CTSL2|1515|cathepsin L2##AY358641|CTSL2|1515|cathepsin L2##NM_001333|CTSL2|1515|cathepsin L2##BC005058|HIATL2|84278|hippocampus abundant transcript-like 2##NM_020893|C9orf174|100499483|chromosome 9 open reading frame 174##CR749320|C9orf174|100499483|chromosome 9 open reading frame 174##NM_014290|TDRD7|23424|tudor domain containing 7##BC028694|TDRD7|23424|tudor domain containing 7##AK294488|TDRD7|23424|tudor domain containing 7##AK314853|TDRD7|23424|tudor domain containing 7	0.0	
chrUn_gl000227	115344	115524	reg1005435.p2	3.500	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chrX	131305620	131305730	reg1039787.p1	3.500	+	FJ717411 BC114371 AK125336 NM_194277	-43715	-	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	-148035	+	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	-148354	+	EU832115 EU832161 EU832209 EU832255 TSC_hg19_v1_chrX_-_131351340 AL049685 BC003403 AK124801 BX647223 AL832461	45787	-	TSC_hg19_v1_chrX_-_131352063 BC051467 AY298955 NM_021183	46385	-	TSC_hg19_v1_chrX_+_131352259 AK095439	46752	+	FJ717411|FRMD7|90167|FERM domain containing 7##BC114371|FRMD7|90167|FERM domain containing 7##AK125336|FRMD7|90167|FERM domain containing 7##NM_194277|FRMD7|90167|FERM domain containing 7##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##EU832115|RAP2C|57826|RAP2C, member of RAS oncogene family##EU832161|RAP2C|57826|RAP2C, member of RAS oncogene family##EU832209|RAP2C|57826|RAP2C, member of RAS oncogene family##EU832255|RAP2C|57826|RAP2C, member of RAS oncogene family##AL049685|RAP2C|57826|RAP2C, member of RAS oncogene family##BC003403|RAP2C|57826|RAP2C, member of RAS oncogene family##AK124801|RAP2C|57826|RAP2C, member of RAS oncogene family##BX647223|RAP2C|57826|RAP2C, member of RAS oncogene family##AL832461|RAP2C|57826|RAP2C, member of RAS oncogene family##BC051467|RAP2C|57826|RAP2C, member of RAS oncogene family##AY298955|RAP2C|57826|RAP2C, member of RAS oncogene family##NM_021183|RAP2C|57826|RAP2C, member of RAS oncogene family	0.858169	CTCF.p2:27:0.808
chrX	63647297	63647387	reg1035823.p1	3.500	+	AK298847 NM_017677 TSC_hg19_v1_chrX_-_63615334	-31999	-	CU680314 TSC_hg19_v1_chrX_-_63615324 BC012399	-32058	-	AK096896 AK300684 NM_130388	-196844	-	TSC_hg19_v1_chrX_-_64139018 AK001547	491699	-	TSC_hg19_v1_chrX_-_64196331 AK022918 AK123763 AK315485 AK222708 AK293570 AF270491 BC004411 AB032992 NM_001178033 NM_018684	549007	-	AK022807 TSC_hg19_v1_chrX_-_64254616 NM_001178032 NM_001243804	607295	-	NM_017677|MTMR8|55613|myotubularin related protein 8##BC012399|MTMR8|55613|myotubularin related protein 8##AK096896|ASB12|142689|ankyrin repeat and SOCS box containing 12##AK300684|ASB12|142689|ankyrin repeat and SOCS box containing 12##NM_130388|ASB12|142689|ankyrin repeat and SOCS box containing 12##AK001547|ZC4H2|55906|zinc finger, C4H2 domain containing##AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing##AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing##AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing##AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing##AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing##AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing##BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing##AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing##AK022807|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001178032|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001243804|ZC4H2|55906|zinc finger, C4H2 domain containing	0.0	
chr1	208056819	208056911	reg1039340.p2	3.499	+	TSC_hg19_v1_chr1_+_207925420 BX537451 BX640613 BX649050 X59405 X59408 AK291227 AK296819 BC026273 BC030594 X59406 X59407 X59409 X59410 AK222822 BC007046 S51940 Y00651 EF076055 EF076056 EF076057 EF076058 M58050 D84105 AB462973 DQ890901 DQ894054 AF209712 AF209713 AF209714	-131382	+	TSC_hg19_v1_chr1_+_207925400 NM_002389 NM_153826 NM_172350 NM_172351 NM_172352 NM_172353 NM_172359 NM_172361	-131472	+	NM_175710 BC109190 BC109191	-238378	+	BX640941 TSC_hg19_v1_chr1_-_208059392	2458	-	TSC_hg19_v1_chr1_-_208084379 DQ891428 DQ894603	27518	-	BC039146 AK291529 TSC_hg19_v1_chr1_-_208084444 AK293030 AK294381 AF523361 S53910 S53911 AK300835 M81104 NM_001025109 NM_001773	27692	-	BX537451|CD46|4179|CD46 molecule, complement regulatory protein##BX640613|CD46|4179|CD46 molecule, complement regulatory protein##BX649050|CD46|4179|CD46 molecule, complement regulatory protein##X59405|CD46|4179|CD46 molecule, complement regulatory protein##X59408|CD46|4179|CD46 molecule, complement regulatory protein##AK291227|CD46|4179|CD46 molecule, complement regulatory protein##AK296819|CD46|4179|CD46 molecule, complement regulatory protein##BC026273|CD46|4179|CD46 molecule, complement regulatory protein##BC030594|CD46|4179|CD46 molecule, complement regulatory protein##X59406|CD46|4179|CD46 molecule, complement regulatory protein##X59407|CD46|4179|CD46 molecule, complement regulatory protein##X59409|CD46|4179|CD46 molecule, complement regulatory protein##X59410|CD46|4179|CD46 molecule, complement regulatory protein##AK222822|CD46|4179|CD46 molecule, complement regulatory protein##BC007046|CD46|4179|CD46 molecule, complement regulatory protein##S51940|CD46|4179|CD46 molecule, complement regulatory protein##Y00651|CD46|4179|CD46 molecule, complement regulatory protein##EF076055|CD46|4179|CD46 molecule, complement regulatory protein##EF076056|CD46|4179|CD46 molecule, complement regulatory protein##EF076057|CD46|4179|CD46 molecule, complement regulatory protein##EF076058|CD46|4179|CD46 molecule, complement regulatory protein##M58050|CD46|4179|CD46 molecule, complement regulatory protein##D84105|CD46|4179|CD46 molecule, complement regulatory protein##DQ890901|CD46|4179|CD46 molecule, complement regulatory protein##DQ894054|CD46|4179|CD46 molecule, complement regulatory protein##AF209712|CD46|4179|CD46 molecule, complement regulatory protein##AF209713|CD46|4179|CD46 molecule, complement regulatory protein##AF209714|CD46|4179|CD46 molecule, complement regulatory protein##NM_002389|CD46|4179|CD46 molecule, complement regulatory protein##NM_153826|CD46|4179|CD46 molecule, complement regulatory protein##NM_172350|CD46|4179|CD46 molecule, complement regulatory protein##NM_172351|CD46|4179|CD46 molecule, complement regulatory protein##NM_172352|CD46|4179|CD46 molecule, complement regulatory protein##NM_172353|CD46|4179|CD46 molecule, complement regulatory protein##NM_172359|CD46|4179|CD46 molecule, complement regulatory protein##NM_172361|CD46|4179|CD46 molecule, complement regulatory protein##NM_175710|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109190|CR1L|1379|complement component (3b/4b) receptor 1-like##BC109191|CR1L|1379|complement component (3b/4b) receptor 1-like##DQ891428|CD34|947|CD34 molecule##DQ894603|CD34|947|CD34 molecule##BC039146|CD34|947|CD34 molecule##AK291529|CD34|947|CD34 molecule##AK293030|CD34|947|CD34 molecule##AK294381|CD34|947|CD34 molecule##AF523361|CD34|947|CD34 molecule##S53910|CD34|947|CD34 molecule##S53911|CD34|947|CD34 molecule##AK300835|CD34|947|CD34 molecule##M81104|CD34|947|CD34 molecule##NM_001025109|CD34|947|CD34 molecule##NM_001773|CD34|947|CD34 molecule	0.0	
chr14	72297251	72297335	reg1040655.p2	3.499	+	AF090989 AF090990 NM_015556	-301252	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-922842	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-923160	+	AK294895 NM_001204423	101523	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	101860	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	102573	+	AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6	0.467484	CTCF.p2:-4:0.467
chr16	27878939	27879044	reg1040358.p1	3.499	+	TSC_hg19_v1_chr16_+_27561464 NM_015202 AB011128 BC150276 BC131508	-317527	+	TSC_hg19_v1_chr16_-_27561248 NM_001520 U02619	-317722	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	-317760	-	BC016460 NM_144675	20486	-	TSC_hg19_v1_chr16_-_28074776 AY358206 NM_001109763	195811	-	AY026388 BC130304 BC144189 TSC_hg19_v1_chr16_-_28222816 AK123846	343794	-	NM_015202|KIAA0556|23247|KIAA0556##AB011128|KIAA0556|23247|KIAA0556##BC150276|KIAA0556|23247|KIAA0556##BC131508|KIAA0556|23247|KIAA0556##NM_001520|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##U02619|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC016460|GSG1L|146395|GSG1-like##NM_144675|GSG1L|146395|GSG1-like##AY358206|GSG1L|146395|GSG1-like##NM_001109763|GSG1L|146395|GSG1-like##AY026388|XPO6|23214|exportin 6##BC130304|XPO6|23214|exportin 6##BC144189|XPO6|23214|exportin 6##AK123846|XPO6|23214|exportin 6	0.999882	CTCF.p2:34:1.000
chr17	59914492	59914672	reg1004343.p1	3.499	+	CU687600 BC062710 NM_199290 TSC_hg19_v1_chr17_-_59668583	-246020	-	AF188703 NM_018488 BC136403 BC144062 AB464284	-380754	+	BC142620 TSC_hg19_v1_chr17_+_59529788	-384796	+	BC101472 BC101474 AF360549 TSC_hg19_v1_chr17_-_59940873 NM_032043	26212	-	TSC_hg19_v1_chr17_-_60005339 AB033113 AK308307 AK299032 AL136800 NM_020748	90760	-	TSC_hg19_v1_chr17_-_60142600 BC140891 AF117754 NM_005121	228045	-	BC062710|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##NM_199290|NACA2|342538|nascent polypeptide-associated complex alpha subunit 2##AF188703|TBX4|9496|T-box 4##NM_018488|TBX4|9496|T-box 4##BC136403|TBX4|9496|T-box 4##BC144062|TBX4|9496|T-box 4##BC142620|TBX4|9496|T-box 4##BC101472|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##BC101474|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AF360549|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##NM_032043|BRIP1|83990|BRCA1 interacting protein C-terminal helicase 1##AB033113|INTS2|57508|integrator complex subunit 2##AK308307|INTS2|57508|integrator complex subunit 2##AK299032|INTS2|57508|integrator complex subunit 2##AL136800|INTS2|57508|integrator complex subunit 2##NM_020748|INTS2|57508|integrator complex subunit 2##BC140891|MED13|9969|mediator complex subunit 13##AF117754|MED13|9969|mediator complex subunit 13##NM_005121|MED13|9969|mediator complex subunit 13	0.0	
chr20	56050918	56051013	reg1024518.p1	3.499	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-84508	+	NM_001190472	-116088	-	AK292247 AY349350 NM_001015885	-124364	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	49236	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	85192	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	144573	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.0	
chr22	35529155	35529262	reg1043784.p1	3.499	+	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	-67059	+	AJ007583 AB011181 NM_004737 NM_133642	-1212838	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-2074853	-	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	124268	+	AK293694 NM_001135729	166059	+	TSC_hg19_v1_chr22_+_35695855 NM_001135730 NM_001135732 NM_005488 AK026576 AJ006973 AY358980	166623	+	CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)##NM_001135730|TOM1|10043|target of myb1 (chicken)##NM_001135732|TOM1|10043|target of myb1 (chicken)##NM_005488|TOM1|10043|target of myb1 (chicken)##AK026576|TOM1|10043|target of myb1 (chicken)##AJ006973|TOM1|10043|target of myb1 (chicken)##AY358980|TOM1|10043|target of myb1 (chicken)	0.0	
chr3	128216554	128216672	reg1014708.p1	3.499	+	BC051342 BC002557 NM_032638 BX647499 TSC_hg19_v1_chr3_-_128212044	-4577	-	TSC_hg19_v1_chr3_-_128207374 AK314826 NM_001145661	-9243	-	M77810 BC015577 BC018988 BC051272 NM_001145662 M68891 TSC_hg19_v1_chr3_-_128206775	-9874	-	AF008192 NM_007354	78315	-	BC007995 TSC_hg19_v1_chr3_-_128369648 CR456742 AB527671 CU679817	152973	-	TSC_hg19_v1_chr3_-_128369662 AK297941 AK312369 AK296905 CR749284 BC010839 AK223595	153069	-	BC051342|GATA2|2624|GATA binding protein 2##BC002557|GATA2|2624|GATA binding protein 2##NM_032638|GATA2|2624|GATA binding protein 2##BX647499|GATA2|2624|GATA binding protein 2##AK314826|GATA2|2624|GATA binding protein 2##NM_001145661|GATA2|2624|GATA binding protein 2##M77810|GATA2|2624|GATA binding protein 2##BC015577|GATA2|2624|GATA binding protein 2##BC018988|GATA2|2624|GATA binding protein 2##BC051272|GATA2|2624|GATA binding protein 2##NM_001145662|GATA2|2624|GATA binding protein 2##M68891|GATA2|2624|GATA binding protein 2##AF008192|C3orf27|23434|chromosome 3 open reading frame 27##NM_007354|C3orf27|23434|chromosome 3 open reading frame 27##BC007995|RPN1|6184|ribophorin I##CR456742|RPN1|6184|ribophorin I##AK297941|RPN1|6184|ribophorin I##AK312369|RPN1|6184|ribophorin I##AK296905|RPN1|6184|ribophorin I##CR749284|RPN1|6184|ribophorin I##BC010839|RPN1|6184|ribophorin I##AK223595|RPN1|6184|ribophorin I	0.0	
chr3	47841367	47841475	reg1033136.p1	3.499	+	TSC_hg19_v1_chr3_-_47823419 AK302541	-17914	-	TSC_hg19_v1_chr3_-_47823394 BC012101 NM_003074	-18024	-	TSC_hg19_v1_chr3_-_47823378 BC032564	-18044	-	BC047335 NM_014966 NM_138615 TSC_hg19_v1_chr3_+_47844624 BC028405 AK291266	3090	+	AK096791 TSC_hg19_v1_chr3_+_47844627 BC020126 BC038417 BC015029 AB020697 BC063510	3235	+	TSC_hg19_v1_chr3_+_47866475 AK002076	25067	+	AK302541|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1##BC012101|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1##NM_003074|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1##BC032564|SMARCC1|6599|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1##BC047335|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##NM_014966|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##NM_138615|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC028405|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK291266|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK096791|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC020126|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC038417|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC015029|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AB020697|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##BC063510|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30##AK002076|DHX30|22907|DEAH (Asp-Glu-Ala-His) box polypeptide 30	0.988012	CTCF.p2:21:0.988
chr5	131762598	131762701	reg1031526.p2	3.499	+	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-16021	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-57141	+	BX538252 TSC_hg19_v1_chr5_-_131705330	-57350	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	63832	-	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	116543	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	129991	+	AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BX538252|LOC553103|553103|uncharacterized LOC553103##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)	0.455531	CTCF.p2:16:0.456
chr5	138533352	138533456	reg1037458.p1	3.499	+	HQ589335 TSC_hg19_v1_chr5_+_138211097	-322313	+	TSC_hg19_v1_chr5_-_138211057 NM_015564	-322345	-	AK309790 TSC_hg19_v1_chr5_-_138211025 AB007876 BC028172 AK291064 AK297332	-322391	-	AF547994 TSC_hg19_v1_chr5_-_138533996 AK075177	585	-	TSC_hg19_v1_chr5_-_138533998 AY358950 BC011568	604	-	TSC_hg19_v1_chr5_-_138534058 AJ299442 AK074624 NM_001037633 NM_022464	642	-	HQ589335|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##NM_015564|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK309790|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AB007876|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##BC028172|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK291064|LRRTM2|26045|leucine rich repeat transmembrane neuronal 2##AK297332|CTNNA1|1495|catenin (cadherin-associated protein), alpha 1, 102kDa##AF547994|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK075177|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AY358950|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##BC011568|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AJ299442|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##AK074624|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_001037633|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)##NM_022464|SIL1|64374|SIL1 homolog, endoplasmic reticulum chaperone (S. cerevisiae)	0.0	
chr7	116596007	116596120	reg1036761.p2	3.499	+	AK292372 BC030954 TSC_hg19_v1_chr7_+_116593554 AK298540 CU687306 CU689046 DQ892647 DQ895886	-2490	+	TSC_hg19_v1_chr7_+_116593397 BC075855 NM_018412 NM_021908 AF234882 AF234883	-2678	+	TSC_hg19_v1_chr7_+_116502640 BC005338 AK293405 AK294409 AK315915 AK222989 AK223004 U03269 BC015963 BT006735 CU675123 U03851	-93431	+	TSC_hg19_v1_chr7_+_116660271 AK093212	64204	+	TSC_hg19_v1_chr7_+_116660294 AY009152 AY009153 AK297510	64302	+	BC078170 AK056742 NM_003391 X07876	367272	-	AK292372|ST7|7982|suppression of tumorigenicity 7##BC030954|ST7|7982|suppression of tumorigenicity 7##AK298540|ST7|7982|suppression of tumorigenicity 7##DQ892647|ST7|7982|suppression of tumorigenicity 7##DQ895886|ST7|7982|suppression of tumorigenicity 7##BC075855|ST7|7982|suppression of tumorigenicity 7##NM_018412|ST7|7982|suppression of tumorigenicity 7##NM_021908|ST7|7982|suppression of tumorigenicity 7##AF234882|ST7|7982|suppression of tumorigenicity 7##AF234883|ST7|7982|suppression of tumorigenicity 7##BC005338|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK293405|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK294409|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK315915|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK222989|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK223004|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##U03269|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BC015963|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##BT006735|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##U03851|CAPZA2|830|capping protein (actin filament) muscle Z-line, alpha 2##AK093212|ST7|7982|suppression of tumorigenicity 7##AY009152|ST7|7982|suppression of tumorigenicity 7##AY009153|ST7|7982|suppression of tumorigenicity 7##AK297510|ST7|7982|suppression of tumorigenicity 7##BC078170|WNT2|7472|wingless-type MMTV integration site family member 2##AK056742|WNT2|7472|wingless-type MMTV integration site family member 2##NM_003391|WNT2|7472|wingless-type MMTV integration site family member 2##X07876|WNT2|7472|wingless-type MMTV integration site family member 2	0.0	
chr9	14068841	14068928	reg1041519.p1	3.499	+	AB210041 TSC_hg19_v1_chr9_-_13279602	-789302	-	AB384682 AF093419 BC140793 BC144564 NM_003829	-818546	-	HQ257895 TSC_hg19_v1_chr9_+_12775847	-1293103	+	BX537698 TSC_hg19_v1_chr9_-_14087002	18068	-	BT007266 AB587464 DQ891097 DQ894279 EU832141 EU832234 TSC_hg19_v1_chr9_-_14313648 AK290603 BC001283 U85193	244729	-	TSC_hg19_v1_chr9_-_14313900 AK299605	245019	-	AB210041|MPDZ|8777|multiple PDZ domain protein##AF093419|MPDZ|8777|multiple PDZ domain protein##BC140793|MPDZ|8777|multiple PDZ domain protein##BC144564|MPDZ|8777|multiple PDZ domain protein##NM_003829|MPDZ|8777|multiple PDZ domain protein##HQ257895|C9orf150|286343|chromosome 9 open reading frame 150##BX537698|NFIB|4781|nuclear factor I/B##BT007266|NFIB|4781|nuclear factor I/B##DQ891097|NFIB|4781|nuclear factor I/B##DQ894279|NFIB|4781|nuclear factor I/B##EU832141|NFIB|4781|nuclear factor I/B##EU832234|NFIB|4781|nuclear factor I/B##AK290603|NFIB|4781|nuclear factor I/B##BC001283|NFIB|4781|nuclear factor I/B##U85193|NFIB|4781|nuclear factor I/B##AK299605|NFIB|4781|nuclear factor I/B	0.013882	
chr9	92316233	92316363	reg1034229.p1	3.499	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-96317	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-203291	-	BC054500 NM_001142287 NM_006378	-221688	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	1088821	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1247738	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	1247769	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.0	
chr1	28210546	28210625	reg1024366.p1	3.498	+	CR749321 BC132692 BC133049 NM_001039477 NM_001105556 NM_004848 TSC_hg19_v1_chr1_+_28199054 AK303141 HQ258751 BC031655 AK303090	-11513	+	AF126488 AX775985 TSC_hg19_v1_chr1_+_28157335 AK313814 AB464098 U14575	-53244	+	TSC_hg19_v1_chr1_+_28157334 AF061958 AK292077 AK297771 AK304619 NM_002713 NM_138558 AK307570 BC093017	-53257	+	CR450348 DQ892352 DQ895821 TSC_hg19_v1_chr1_-_28241083 J05249 BC001630 AK300691 AK312956 AK296898 AK298759 BC012157	30464	-	TSC_hg19_v1_chr1_-_28241258 BC021257 NM_002946	30679	-	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	50976	+	CR749321|C1orf38|9473|chromosome 1 open reading frame 38##BC132692|C1orf38|9473|chromosome 1 open reading frame 38##BC133049|C1orf38|9473|chromosome 1 open reading frame 38##NM_001039477|C1orf38|9473|chromosome 1 open reading frame 38##NM_001105556|C1orf38|9473|chromosome 1 open reading frame 38##NM_004848|C1orf38|9473|chromosome 1 open reading frame 38##AK303141|C1orf38|9473|chromosome 1 open reading frame 38##HQ258751|C1orf38|9473|chromosome 1 open reading frame 38##BC031655|C1orf38|9473|chromosome 1 open reading frame 38##AK303090|C1orf38|9473|chromosome 1 open reading frame 38##AF126488|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AX775985|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK313814|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##U14575|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AF061958|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK292077|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK297771|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK304619|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_002713|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##NM_138558|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##AK307570|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##BC093017|PPP1R8|5511|protein phosphatase 1, regulatory subunit 8##CR450348|RPA2|6118|replication protein A2, 32kDa##DQ892352|RPA2|6118|replication protein A2, 32kDa##DQ895821|RPA2|6118|replication protein A2, 32kDa##J05249|RPA2|6118|replication protein A2, 32kDa##BC001630|RPA2|6118|replication protein A2, 32kDa##AK300691|RPA2|6118|replication protein A2, 32kDa##AK312956|RPA2|6118|replication protein A2, 32kDa##AK298759|RPA2|6118|replication protein A2, 32kDa##BC012157|RPA2|6118|replication protein A2, 32kDa##BC021257|RPA2|6118|replication protein A2, 32kDa##NM_002946|RPA2|6118|replication protein A2, 32kDa##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B	0.0	
chr12	92757438	92757618	reg1027425.p2	3.498	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-217885	-	NM_001920	-1180723	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-1180948	-	AJ845165 AJ845166 NM_001025233	60206	+	AJ845168 NM_001025232	64395	-	NM_001037671 NM_001178097	339090	+	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74	0.0	
chr16	68451903	68451978	reg1038229.p1	3.498	+	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	-106981	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	-107114	-	TSC_hg19_v1_chr16_+_68298430 NM_001076785 NM_003983 CR749291 CR749475 AK310866 BC028216	-153490	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	30541	-	TSC_hg19_v1_chr16_+_68564035 BC040871	112093	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	121258	+	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_001076785|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##NM_003983|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749291|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749475|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK310866|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC028216|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)	0.0	
chr17	1459356	1459510	reg1039019.p1	3.498	+	TSC_hg19_v1_chr17_-_1420177 AK312844 NM_001135642 NM_016532 NM_130766	-39254	-	TSC_hg19_v1_chr17_-_1419907 DQ892815 DQ896061 AB529166 AK297955 AK303907 AK307293 AB036829 AB036830 AK312585 BC004362	-39467	-	U45973 TSC_hg19_v1_chr17_-_1413071	-46400	-	BC082976 TSC_hg19_v1_chr17_-_1466077 BC027177 D30036 M73704 BC045108 BC068538 NM_006224	6649	-	AF289592 TSC_hg19_v1_chr17_-_1531711 AB120364	72207	-	TSC_hg19_v1_chr17_-_1532115 BC027923 NM_152346 BC071859	72711	-	AK312844|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_001135642|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_016532|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_130766|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ892815|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ896061|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK297955|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK303907|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK307293|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036829|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036830|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312585|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC004362|INPP5K|51763|inositol polyphosphate-5-phosphatase K##U45973|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC082976|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC027177|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D30036|PITPNA|5306|phosphatidylinositol transfer protein, alpha##M73704|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC045108|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC068538|PITPNA|5306|phosphatidylinositol transfer protein, alpha##NM_006224|PITPNA|5306|phosphatidylinositol transfer protein, alpha##AF289592|SLC43A2|124935|solute carrier family 43, member 2##AB120364|SLC43A2|124935|solute carrier family 43, member 2##BC027923|SLC43A2|124935|solute carrier family 43, member 2##NM_152346|SLC43A2|124935|solute carrier family 43, member 2##BC071859|SLC43A2|124935|solute carrier family 43, member 2	0.0	
chr17	7155586	7155704	reg1033115.p1	3.498	+	NM_203415 TSC_hg19_v1_chr17_+_7155631 NM_015362 NM_203413 NM_203414 BC002762 AK225983 AK289940	-144	+	BC009295 NM_015343 TSC_hg19_v1_chr17_-_7155296	-363	-	NM_001143775 TSC_hg19_v1_chr17_-_7155018	-611	-	AB013910 TSC_hg19_v1_chr17_+_7155880 AF070658 AF087868 CU678174 AF163262	224	+	BC001055 AK313958 TSC_hg19_v1_chr17_-_7165798	10148	-	NM_001185023 NM_001307	10618	-	NM_203415|C17orf81|23587|chromosome 17 open reading frame 81##NM_015362|C17orf81|23587|chromosome 17 open reading frame 81##NM_203413|C17orf81|23587|chromosome 17 open reading frame 81##NM_203414|C17orf81|23587|chromosome 17 open reading frame 81##BC002762|C17orf81|23587|chromosome 17 open reading frame 81##AK225983|C17orf81|23587|chromosome 17 open reading frame 81##AK289940|C17orf81|23587|chromosome 17 open reading frame 81##BC009295|CTDNEP1|23399|CTD nuclear envelope phosphatase 1##NM_015343|CTDNEP1|23399|CTD nuclear envelope phosphatase 1##NM_001143775|CTDNEP1|23399|CTD nuclear envelope phosphatase 1##AB013910|C17orf81|23587|chromosome 17 open reading frame 81##AF070658|C17orf81|23587|chromosome 17 open reading frame 81##AF087868|C17orf81|23587|chromosome 17 open reading frame 81##AF163262|C17orf81|23587|chromosome 17 open reading frame 81##BC001055|CLDN7|1366|claudin 7##AK313958|CLDN7|1366|claudin 7##NM_001185023|CLDN7|1366|claudin 7##NM_001307|CLDN7|1366|claudin 7	0.0	
chr20	62485252	62485385	reg1036654.p2	3.498	+	TSC_hg19_v1_chr20_-_62462618 BC052269 BC073800	-22721	-	AK131482 NM_025224	-48463	-	TSC_hg19_v1_chr20_+_62372460 AK298304 BC017446	-112798	+	NM_080622	7247	+	NM_001243891 NM_001243892 NM_001243894 NM_001243895 NM_003288 NM_199359 NM_199360 NM_199361 NM_199362 NM_199363 TSC_hg19_v1_chr20_+_62496622 AK298366 AK055068 AK297064 AK314501	11285	+	TSC_hg19_v1_chr20_+_62496638 AF004430	11322	+	BC052269|ZBTB46|140685|zinc finger and BTB domain containing 46##BC073800|ZBTB46|140685|zinc finger and BTB domain containing 46##AK131482|ZBTB46|140685|zinc finger and BTB domain containing 46##NM_025224|ZBTB46|140685|zinc finger and BTB domain containing 46##AK298304|SLC2A4RG|56731|SLC2A4 regulator##BC017446|SLC2A4RG|56731|SLC2A4 regulator##NM_080622|ABHD16B|140701|abhydrolase domain containing 16B##NM_001243891|TPD52L2|7165|tumor protein D52-like 2##NM_001243892|TPD52L2|7165|tumor protein D52-like 2##NM_001243894|TPD52L2|7165|tumor protein D52-like 2##NM_001243895|TPD52L2|7165|tumor protein D52-like 2##NM_003288|TPD52L2|7165|tumor protein D52-like 2##NM_199359|TPD52L2|7165|tumor protein D52-like 2##NM_199360|TPD52L2|7165|tumor protein D52-like 2##NM_199361|TPD52L2|7165|tumor protein D52-like 2##NM_199362|TPD52L2|7165|tumor protein D52-like 2##NM_199363|TPD52L2|7165|tumor protein D52-like 2##AK298366|TPD52L2|7165|tumor protein D52-like 2##AK055068|TPD52L2|7165|tumor protein D52-like 2##AK297064|TPD52L2|7165|tumor protein D52-like 2##AK314501|TPD52L2|7165|tumor protein D52-like 2##AF004430|TPD52L2|7165|tumor protein D52-like 2	0.0	
chr2	197457637	197457717	reg1040547.p1	3.498	+	BC117194 BC117198 AB037722 NM_020760	-385	-	TSC_hg19_v1_chr2_-_197036310 NM_004226	-421359	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-421398	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	46680	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	206736	-	BC137150 BC137151 AY358249 NM_213608	217260	-	BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC137150|C2orf66|401027|chromosome 2 open reading frame 66##BC137151|C2orf66|401027|chromosome 2 open reading frame 66##AY358249|C2orf66|401027|chromosome 2 open reading frame 66##NM_213608|C2orf66|401027|chromosome 2 open reading frame 66	0.0	
chr3	100322425	100322517	reg1033751.p1	3.498	+	BC040355 TSC_hg19_v1_chr3_+_100238088	-84396	+	TSC_hg19_v1_chr3_+_100211558 AK129789	-110888	+	TSC_hg19_v1_chr3_+_100211440 AK000996 AY450392 NM_018004	-111018	+	NM_032787 AK027360	5967	+	NM_001007565 NM_001195479 NM_006070 TSC_hg19_v1_chr3_+_100428337 AK093456 BC009241	105774	+	TSC_hg19_v1_chr3_+_100428385 BC001483 NM_001195478	105902	+	BC040355|TMEM45A|55076|transmembrane protein 45A##AK129789|TMEM45A|55076|transmembrane protein 45A##AK000996|TMEM45A|55076|transmembrane protein 45A##AY450392|TMEM45A|55076|transmembrane protein 45A##NM_018004|TMEM45A|55076|transmembrane protein 45A##NM_032787|GPR128|84873|G protein-coupled receptor 128##AK027360|GPR128|84873|G protein-coupled receptor 128##NM_001007565|TFG|10342|TRK-fused gene##NM_001195479|TFG|10342|TRK-fused gene##NM_006070|TFG|10342|TRK-fused gene##AK093456|TFG|10342|TRK-fused gene##BC009241|TFG|10342|TRK-fused gene##BC001483|TFG|10342|TRK-fused gene##NM_001195478|TFG|10342|TRK-fused gene	0.932764	CTCF.p2:14:0.933
chr4	36246437	36246503	reg1035574.p2	3.498	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	-433	-	TSC_hg19_v1_chr4_+_30722465 AB006756	-5524011	+	AB006757 TSC_hg19_v1_chr4_+_30722198	-5524276	+	AK131492 NM_001136536 AK304357 AK316523	36776	+	BC157885 NM_001170700	39173	+	NM_001144990	1000219	+	AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##AB006756|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##NM_001144990|KIAA1239|57495|KIAA1239	0.0	
chr6	18596712	18596815	reg1015459.p2	3.498	+	AK096832 NM_182757 AB076367 BC063311 AL832329	-209096	+	X64229 TSC_hg19_v1_chr6_-_18264759 BC012442 AK312616 AK298089 AK294079 BC035259 AK297749 NM_001134709 NM_003472	-332042	-	TSC_hg19_v1_chr6_+_18155652 BC113093 NM_153042 AK125318	-441108	+	TSC_hg19_v1_chr6_+_19837600 BC014941 NM_001546 U28368 U16153	1240872	+	TSC_hg19_v1_chr6_+_19838612 AF085889	1241920	+	BC045695 AK304748 BC150650 BC150652 TSC_hg19_v1_chr6_-_20212683 AK131269 NM_001080480 AK296857	1615909	-	AK096832|RNF144B|255488|ring finger protein 144B##NM_182757|RNF144B|255488|ring finger protein 144B##AB076367|RNF144B|255488|ring finger protein 144B##BC063311|RNF144B|255488|ring finger protein 144B##AL832329|RNF144B|255488|ring finger protein 144B##X64229|DEK|7913|DEK oncogene##BC012442|DEK|7913|DEK oncogene##AK312616|DEK|7913|DEK oncogene##AK298089|DEK|7913|DEK oncogene##AK294079|DEK|7913|DEK oncogene##BC035259|DEK|7913|DEK oncogene##AK297749|DEK|7913|DEK oncogene##NM_001134709|DEK|7913|DEK oncogene##NM_003472|DEK|7913|DEK oncogene##BC113093|KDM1B|221656|lysine (K)-specific demethylase 1B##NM_153042|KDM1B|221656|lysine (K)-specific demethylase 1B##AK125318|KDM1B|221656|lysine (K)-specific demethylase 1B##BC014941|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##NM_001546|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U28368|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##U16153|ID4|3400|inhibitor of DNA binding 4, dominant negative helix-loop-helix protein##BC045695|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK304748|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150650|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##BC150652|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK131269|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##NM_001080480|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1##AK296857|MBOAT1|154141|membrane bound O-acyltransferase domain containing 1	0.0	
chr7	74306959	74307071	reg1046679.p2	3.498	+	BC052588 TSC_hg19_v1_chr7_+_74306933 BC027480 D38436 D38502 AK309660	-95	+	TSC_hg19_v1_chr7_-_74306725 BC095487	-294	-	TSC_hg19_v1_chr7_-_74306685 AK303473 AK307228 AK309007	-332	-	BC147030 BC147031 NM_001145063	72065	+	AB463349 AF410455 AM392683 DQ893169 TSC_hg19_v1_chr7_-_74489627 AL136804 AK309117 BC007823 BC019008	182587	-	BC032712 TSC_hg19_v1_chr7_-_74489639 AK057870	182623	-	BC052588|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##BC027480|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##D38436|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##D38502|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##AK309660|PMS2P5|5383|postmeiotic segregation increased 2 pseudogene 5##AK303473|STAG3L2|442582|stromal antigen 3-like 2##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##NM_001145063|GATSL1|389523|GATS protein-like 1##AF410455|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AM392683|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##DQ893169|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AL136804|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK309117|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC007823|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC019008|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##BC032712|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK057870|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16	0.0	
chr9	30774565	30774709	reg1036158.p2	3.498	+	AK056372 NM_152570	-2055335	-	AK057806 JN681271 NM_145005	-3200796	-	AL832229 AL832467 TSC_hg19_v1_chr9_-_27573476 AK291425 NM_018325	-3201166	-	TSC_hg19_v1_chr9_+_32384618 NM_002197 AF261088	1609953	+	TSC_hg19_v1_chr9_+_32384622 AK057904	1609990	+	TSC_hg19_v1_chr9_+_32384648 AK308752 Z11559	1610012	+	AK056372|LINGO2|158038|leucine rich repeat and Ig domain containing 2##NM_152570|LINGO2|158038|leucine rich repeat and Ig domain containing 2##AK057806|C9orf72|203228|chromosome 9 open reading frame 72##JN681271|C9orf72|203228|chromosome 9 open reading frame 72##NM_145005|C9orf72|203228|chromosome 9 open reading frame 72##AL832229|C9orf72|203228|chromosome 9 open reading frame 72##AL832467|C9orf72|203228|chromosome 9 open reading frame 72##AK291425|C9orf72|203228|chromosome 9 open reading frame 72##NM_018325|C9orf72|203228|chromosome 9 open reading frame 72##NM_002197|ACO1|48|aconitase 1, soluble##AF261088|ACO1|48|aconitase 1, soluble##AK057904|ACO1|48|aconitase 1, soluble##AK308752|ACO1|48|aconitase 1, soluble##Z11559|ACO1|48|aconitase 1, soluble	1.82382	CTCF.p2:36:0.933	CTCF.p2:-50:0.890
chr10	11196405	11196585	reg1041300.p2	3.497	+	U69546 TSC_hg19_v1_chr10_+_11060121	-136379	+	AF090694 TSC_hg19_v1_chr10_+_11060072	-136424	+	TSC_hg19_v1_chr10_+_11059882 AK314087 NM_006561 BC036391	-136605	+	AK299983 NM_001025076 NM_001083591 TSC_hg19_v1_chr10_+_11207008	10474	+	AK297313 TSC_hg19_v1_chr10_+_11207057 AK299992 AF036956 AK293164 AF432906	10601	+	TSC_hg19_v1_chr10_+_11207244 AK316354	10750	+	U69546|CELF2|10659|CUGBP, Elav-like family member 2##AF090694|CELF2|10659|CUGBP, Elav-like family member 2##AK314087|CELF2|10659|CUGBP, Elav-like family member 2##NM_006561|CELF2|10659|CUGBP, Elav-like family member 2##BC036391|CELF2|10659|CUGBP, Elav-like family member 2##AK299983|CELF2|10659|CUGBP, Elav-like family member 2##NM_001025076|CELF2|10659|CUGBP, Elav-like family member 2##NM_001083591|CELF2|10659|CUGBP, Elav-like family member 2##AK297313|CELF2|10659|CUGBP, Elav-like family member 2##AK299992|CELF2|10659|CUGBP, Elav-like family member 2##AF036956|CELF2|10659|CUGBP, Elav-like family member 2##AK293164|CELF2|10659|CUGBP, Elav-like family member 2##AF432906|CELF2|10659|CUGBP, Elav-like family member 2##AK316354|CELF2|10659|CUGBP, Elav-like family member 2	0.0	
chr11	97481141	97481244	reg1035573.p1	3.497	+	TSC_hg19_v1_chr11_+_96123176 BC031306 AK290579 NM_003772	-1358018	+	TSC_hg19_v1_chr11_-_96123063 AF161533 AF245436 AK313893 AK056790 AK074306 NM_024725	-1358150	-	TSC_hg19_v1_chr11_-_96076415 AB058722 AY040322 BC152449 NM_032427 AK308157	-1404789	-	TSC_hg19_v1_chr11_+_98891687 AK308788 NM_001243270 NM_001243271 NM_014361 BC039255 BC144186	1410557	+	AB013802 AB013803 NM_175566	1945681	+	TSC_hg19_v1_chr11_+_100557961 NM_152432	3076936	+	AK290579|JRKL|8690|jerky homolog-like (mouse)##NM_003772|JRKL|8690|jerky homolog-like (mouse)##AF161533|CCDC82|79780|coiled-coil domain containing 82##AF245436|CCDC82|79780|coiled-coil domain containing 82##AK313893|CCDC82|79780|coiled-coil domain containing 82##AK056790|CCDC82|79780|coiled-coil domain containing 82##AK074306|CCDC82|79780|coiled-coil domain containing 82##NM_024725|CCDC82|79780|coiled-coil domain containing 82##AB058722|MAML2|84441|mastermind-like 2 (Drosophila)##AY040322|MAML2|84441|mastermind-like 2 (Drosophila)##BC152449|MAML2|84441|mastermind-like 2 (Drosophila)##NM_032427|MAML2|84441|mastermind-like 2 (Drosophila)##AK308157|MAML2|84441|mastermind-like 2 (Drosophila)##AK308788|CNTN5|53942|contactin 5##NM_001243270|CNTN5|53942|contactin 5##NM_001243271|CNTN5|53942|contactin 5##NM_014361|CNTN5|53942|contactin 5##BC039255|CNTN5|53942|contactin 5##BC144186|CNTN5|53942|contactin 5##AB013802|CNTN5|53942|contactin 5##AB013803|CNTN5|53942|contactin 5##NM_175566|CNTN5|53942|contactin 5##NM_152432|ARHGAP42|143872|Rho GTPase activating protein 42	0.72747	CTCF.p2:2:0.727
chr1	206947620	206947702	reg1038912.p2	3.497	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-1782	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-89190	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-138551	+	AY040367 NM_153758 AB463800	24565	+	AF453946 NM_013371	54560	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	91514	+	AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20	0.0	
chr12	104683103	104683198	reg1035946.p1	3.497	+	AK128515 TSC_hg19_v1_chr12_+_104682642 AY344670 AY344671 AY344672 AY344680 AY344094 AY344096 AY344095 AY344678 AF077367 AY344679	-538	+	D88687 TSC_hg19_v1_chr12_+_104681047 AK295067	-2064	+	TSC_hg19_v1_chr12_+_104680950 AY344078	-2189	+	TSC_hg19_v1_chr12_+_104697516 NM_001008394 AK098698 BC027612	14378	+	TSC_hg19_v1_chr12_+_104850745 NM_001173982 NM_018413 AK313217	167544	+	AK290923 TSC_hg19_v1_chr12_+_104850752	167601	+	AK128515|TXNRD1|7296|thioredoxin reductase 1##AY344670|TXNRD1|7296|thioredoxin reductase 1##AY344096|TXNRD1|7296|thioredoxin reductase 1##AY344095|TXNRD1|7296|thioredoxin reductase 1##AF077367|TXNRD1|7296|thioredoxin reductase 1##AY344679|TXNRD1|7296|thioredoxin reductase 1##D88687|TXNRD1|7296|thioredoxin reductase 1##AK295067|TXNRD1|7296|thioredoxin reductase 1##NM_001008394|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK098698|EID3|493861|EP300 interacting inhibitor of differentiation 3##BC027612|EID3|493861|EP300 interacting inhibitor of differentiation 3##NM_001173982|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##NM_018413|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK313217|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK290923|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	0.0	
chr12	27973691	27973802	reg1014509.p1	3.497	+	TSC_hg19_v1_chr12_+_27933193 AK095405 NM_020782 BC137116 BC137117 BC108669 AB528162 AB587405 EU446834	-40535	+	NM_001146221	-49538	-	TSC_hg19_v1_chr12_+_27863764 BC015862 AK075378 AK075515 BC109372 BC063515 BC028346	-109972	+	M26958 J03802 NM_198964 NM_198966 AK313476 M26960 BC005961 M26959	149219	-	NM_002820 NM_198965	151169	-	TSC_hg19_v1_chr12_+_28343404 BC035168	369665	+	AK095405|KLHDC5|57542|kelch domain containing 5##NM_020782|KLHDC5|57542|kelch domain containing 5##BC137116|KLHDC5|57542|kelch domain containing 5##BC137117|KLHDC5|57542|kelch domain containing 5##BC108669|KLHDC5|57542|kelch domain containing 5##EU446834|KLHDC5|57542|kelch domain containing 5##NM_001146221|MANSC4|100287284|MANSC domain containing 4##BC015862|MRPS35|60488|mitochondrial ribosomal protein S35##AK075378|MRPS35|60488|mitochondrial ribosomal protein S35##AK075515|MRPS35|60488|mitochondrial ribosomal protein S35##BC109372|MRPS35|60488|mitochondrial ribosomal protein S35##BC063515|MRPS35|60488|mitochondrial ribosomal protein S35##BC028346|MRPS35|60488|mitochondrial ribosomal protein S35##M26958|PTHLH|5744|parathyroid hormone-like hormone##J03802|PTHLH|5744|parathyroid hormone-like hormone##NM_198964|PTHLH|5744|parathyroid hormone-like hormone##NM_198966|PTHLH|5744|parathyroid hormone-like hormone##AK313476|PTHLH|5744|parathyroid hormone-like hormone##M26960|PTHLH|5744|parathyroid hormone-like hormone##BC005961|PTHLH|5744|parathyroid hormone-like hormone##M26959|PTHLH|5744|parathyroid hormone-like hormone##NM_002820|PTHLH|5744|parathyroid hormone-like hormone##NM_198965|PTHLH|5744|parathyroid hormone-like hormone	0.0	
chr12	64639245	64639411	reg1035741.p2	3.497	+	BC071634 AK057111 BC036246 AK129933 NM_152440	-23275	-	TSC_hg19_v1_chr12_+_64238511 BC053903 NM_020762 BC029919	-400782	+	TSC_hg19_v1_chr12_+_64237847 BC065032	-401602	+	BC039369 NM_001099676 NM_001170633	144989	-	TSC_hg19_v1_chr12_+_64798240 NM_007235 AK308108 AK292884	158918	+	BC020569 Y16414 TSC_hg19_v1_chr12_+_64803772 AF039022	164450	+	BC071634|C12orf66|144577|chromosome 12 open reading frame 66##AK057111|C12orf66|144577|chromosome 12 open reading frame 66##BC036246|C12orf66|144577|chromosome 12 open reading frame 66##AK129933|C12orf66|144577|chromosome 12 open reading frame 66##NM_152440|C12orf66|144577|chromosome 12 open reading frame 66##BC053903|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##NM_020762|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC029919|SRGAP1|57522|SLIT-ROBO Rho GTPase activating protein 1##BC039369|C12orf56|115749|chromosome 12 open reading frame 56##NM_001099676|C12orf56|115749|chromosome 12 open reading frame 56##NM_001170633|C12orf56|115749|chromosome 12 open reading frame 56##NM_007235|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK308108|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK292884|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)	0.0	
chr18	77393845	77394026	reg1036363.p2	3.497	+	BC045628 TSC_hg19_v1_chr18_+_77253425	-140555	+	TSC_hg19_v1_chr18_+_77160328 NM_172387 NM_172389 U59736 AK293760 U80918 X99829 EU887560 EU887562 EU887564 EU887566	-233618	+	TSC_hg19_v1_chr18_+_77155967 U08015 BC104753 BC112243 BC143457 EU887559 EU887561 EU887563 EU887565	-237840	+	TSC_hg19_v1_chr18_-_77439359 AK002023	45378	-	TSC_hg19_v1_chr18_-_77439740 AK098581	45806	-	TSC_hg19_v1_chr18_+_77439801 BC047999 NM_004715 NM_048368	45866	+	BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172387|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172389|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U59736|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK293760|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80918|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887560|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887562|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887564|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887566|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U08015|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC104753|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC112243|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC143457|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887559|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887561|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887563|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887565|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK098581|FLJ25715|284241|uncharacterized protein FLJ25715##BC047999|CTDP1|9150|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1##NM_004715|CTDP1|9150|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1##NM_048368|CTDP1|9150|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	0.0	
chr21	24164325	24164399	reg1012591.p1	3.497	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-1793589	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-1793672	+	TSC_hg19_v1_chr21_+_22370656 BC052946 NM_004540	-1793720	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	1636706	+	TSC_hg19_v1_chr21_+_26934442 AF402776	2770110	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	2815453	-	BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##BC052946|NCAM2|4685|neural cell adhesion molecule 2##NM_004540|NCAM2|4685|neural cell adhesion molecule 2##AK124194|FLJ42200|400860|FLJ42200 protein##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39	0.0	
chr2	182049013	182049110	reg1033908.p2	3.497	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-203234	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-203418	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-203691	+	NM_000885	272557	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	272989	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	273261	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.0	
chr2	64789237	64789318	reg1016970.p1	3.497	+	TSC_hg19_v1_chr2_+_64751580 AL833962	-37675	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	-37793	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	-107629	+	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	91572	-	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	91770	-	TSC_hg19_v1_chr2_-_65090764 AK097952	301464	-	AL833962|AFTPH|54812|aftiphilin##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2	0.0	
chr3	46134360	46134450	reg1031691.p2	3.497	+	AB189434 AB189435 NM_001024644 NM_005283	-65427	-	AJ292348 TSC_hg19_v1_chr3_-_46037309 AL832358 NM_024513	-97084	-	NM_006564 Y13248	-149433	+	BC064991 TSC_hg19_v1_chr3_-_46249804 L10918 BC051306 NM_001295	115404	-	NM_001164680 NM_001837 NM_178328 NM_178329 AF262300 AF262299 AF224495 AF262301 AF262302 AF262303 AF262304 BC130318 BC130320 BC110297	149511	+	AK292685 NM_001123041 NM_001123396	260824	+	AB189434|XCR1|2829|chemokine (C motif) receptor 1##AB189435|XCR1|2829|chemokine (C motif) receptor 1##NM_001024644|XCR1|2829|chemokine (C motif) receptor 1##NM_005283|XCR1|2829|chemokine (C motif) receptor 1##AJ292348|FYCO1|79443|FYVE and coiled-coil domain containing 1##AL832358|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_024513|FYCO1|79443|FYVE and coiled-coil domain containing 1##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6##BC064991|CCR1|1230|chemokine (C-C motif) receptor 1##L10918|CCR1|1230|chemokine (C-C motif) receptor 1##BC051306|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001295|CCR1|1230|chemokine (C-C motif) receptor 1##NM_001164680|CCR3|1232|chemokine (C-C motif) receptor 3##NM_001837|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178328|CCR3|1232|chemokine (C-C motif) receptor 3##NM_178329|CCR3|1232|chemokine (C-C motif) receptor 3##AF262300|CCR3|1232|chemokine (C-C motif) receptor 3##AF262299|CCR3|1232|chemokine (C-C motif) receptor 3##AF224495|CCR3|1232|chemokine (C-C motif) receptor 3##AF262301|CCR3|1232|chemokine (C-C motif) receptor 3##AF262302|CCR3|1232|chemokine (C-C motif) receptor 3##AF262303|CCR3|1232|chemokine (C-C motif) receptor 3##AF262304|CCR3|1232|chemokine (C-C motif) receptor 3##BC130318|CCR3|1232|chemokine (C-C motif) receptor 3##BC130320|CCR3|1232|chemokine (C-C motif) receptor 3##BC110297|CCR3|1232|chemokine (C-C motif) receptor 3##AK292685|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123041|CCR2|729230|chemokine (C-C motif) receptor 2##NM_001123396|CCR2|729230|chemokine (C-C motif) receptor 2	0.0	
chr4	105790215	105790333	reg1037836.p1	3.497	+	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	-374221	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	-377792	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-1149374	-	BX640738 NM_017628	276757	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	277537	+	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	277770	+	AK127778|CXXC4|80319|CXXC finger protein 4##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2	0.0	
chr4	185393865	185393953	reg1046958.p1	3.497	+	BC035035 AY358676 AK057370 NM_153343	-254844	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-565998	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-566089	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	1772	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	176692	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	176924	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr5	102223273	102223339	reg1042015.p1	3.497	+	M37721 TSC_hg19_v1_chr5_+_102201730 AK296521 AK290158 S75037 S75038 AB527419 AB095007 BT007419	-21500	+	BC018127 NM_000919 NM_001177306 NM_138766 NM_138821 NM_138822 TSC_hg19_v1_chr5_+_102201531	-21776	+	CU690004 DQ893559 DQ894042 AK131445 AY273897 AF505657 BC034976 NM_173488	-388673	-	BC151135 BC157835 BC015325 CR627424 AK295796 AK225572 AK000132 NM_017676 TSC_hg19_v1_chr5_-_102455843	232507	-	AK310544 AB007893 TSC_hg19_v1_chr5_+_102456004	232675	+	TSC_hg19_v1_chr5_+_102456089 AK294787	232752	+	M37721|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK296521|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AK290158|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75037|PAM|5066|peptidylglycine alpha-amidating monooxygenase##S75038|PAM|5066|peptidylglycine alpha-amidating monooxygenase##AB095007|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BT007419|PAM|5066|peptidylglycine alpha-amidating monooxygenase##BC018127|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_000919|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_001177306|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138766|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138821|PAM|5066|peptidylglycine alpha-amidating monooxygenase##NM_138822|PAM|5066|peptidylglycine alpha-amidating monooxygenase##DQ893559|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##DQ894042|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AK131445|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AY273897|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##AF505657|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC034976|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##NM_173488|SLCO6A1|133482|solute carrier organic anion transporter family, member 6A1##BC151135|GIN1|54826|gypsy retrotransposon integrase 1##BC157835|GIN1|54826|gypsy retrotransposon integrase 1##BC015325|GIN1|54826|gypsy retrotransposon integrase 1##CR627424|GIN1|54826|gypsy retrotransposon integrase 1##AK295796|GIN1|54826|gypsy retrotransposon integrase 1##AK225572|GIN1|54826|gypsy retrotransposon integrase 1##AK000132|GIN1|54826|gypsy retrotransposon integrase 1##NM_017676|GIN1|54826|gypsy retrotransposon integrase 1##AB007893|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK294787|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2	0.0	
chr5	35229992	35230069	reg1018997.p2	3.497	+	NM_001204314 NM_001204315 NM_001204316 NM_001204317 NM_001204318	-111807	-	NM_031900	-181791	-	TSC_hg19_v1_chr5_+_34929697 AY177688 AY258422 BC065745 NM_001012339 NM_194283	-300338	+	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	547	-	NM_000949	792	-	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	387979	+	NM_001204314|PRLR|5618|prolactin receptor##NM_001204315|PRLR|5618|prolactin receptor##NM_001204316|PRLR|5618|prolactin receptor##NM_001204317|PRLR|5618|prolactin receptor##NM_001204318|PRLR|5618|prolactin receptor##NM_031900|AGXT2|64902|alanine--glyoxylate aminotransferase 2##AY177688|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##AY258422|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##BC065745|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_001012339|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##NM_194283|DNAJC21|134218|DnaJ (Hsp40) homolog, subfamily C, member 21##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##NM_000949|PRLR|5618|prolactin receptor##BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2	0.0	
chr6	57037439	57037590	reg1041854.p1	3.497	+	AF095192 TSC_hg19_v1_chr6_+_57037453 AL050287 BC125039 AB462960 AM392695 AM393005 CR533496	-76	+	TSC_hg19_v1_chr6_+_57037103 NM_004282 AK001015 AK023735	-413	+	TSC_hg19_v1_chr6_+_56955021 CU692390 EU832452 EU832534	-82482	+	AB034244 AK313796 NM_183227	48716	-	TSC_hg19_v1_chr6_-_57087081 AF161486 BC015021 NM_016277 CR749371 AK311123	49557	-	TSC_hg19_v1_chr6_+_57182427 BC017833 NM_000947 X74331 AK223287 AK291915 BC064931	144901	+	AF095192|BAG2|9532|BCL2-associated athanogene 2##AL050287|BAG2|9532|BCL2-associated athanogene 2##BC125039|BAG2|9532|BCL2-associated athanogene 2##AM392695|BAG2|9532|BCL2-associated athanogene 2##AM393005|BAG2|9532|BCL2-associated athanogene 2##CR533496|BAG2|9532|BCL2-associated athanogene 2##NM_004282|BAG2|9532|BCL2-associated athanogene 2##AK001015|BAG2|9532|BCL2-associated athanogene 2##AK023735|BAG2|9532|BCL2-associated athanogene 2##EU832452|ZNF451|26036|zinc finger protein 451##EU832534|ZNF451|26036|zinc finger protein 451##AB034244|RAB23|51715|RAB23, member RAS oncogene family##AK313796|RAB23|51715|RAB23, member RAS oncogene family##NM_183227|RAB23|51715|RAB23, member RAS oncogene family##AF161486|RAB23|51715|RAB23, member RAS oncogene family##BC015021|RAB23|51715|RAB23, member RAS oncogene family##NM_016277|RAB23|51715|RAB23, member RAS oncogene family##CR749371|RAB23|51715|RAB23, member RAS oncogene family##AK311123|RAB23|51715|RAB23, member RAS oncogene family##BC017833|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##NM_000947|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##X74331|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK223287|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##AK291915|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)##BC064931|PRIM2|5558|primase, DNA, polypeptide 2 (58kDa)	0.020297	
chrX	133595603	133595693	reg1042219.p2	3.497	+	TSC_hg19_v1_chrX_+_133594303 BC000578 BT019350 CR407645 DQ895107 DQ895109 EU176316 EU176655 L29382 L29383	-1329	+	TSC_hg19_v1_chrX_+_133594225 M31642	-1392	+	TSC_hg19_v1_chrX_+_133594194 NM_000194 AK313435	-1451	+	BC022335 AF234654 BC066327 AK075086 NM_021796	196856	-	AB541014 AB541015 AB528130 AM393279 CU676388 AK125991 TSC_hg19_v1_chrX_-_133930299 AK292517 AL832218 NM_001170756 NM_145284	334661	-	AK307219 NM_001170780	334794	+	BC000578|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##BT019350|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##CR407645|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895107|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##DQ895109|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176316|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##EU176655|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29382|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##L29383|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##M31642|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##NM_000194|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##AK313435|HPRT1|3251|hypoxanthine phosphoribosyltransferase 1##BC022335|PLAC1|10761|placenta-specific 1##AF234654|PLAC1|10761|placenta-specific 1##BC066327|PLAC1|10761|placenta-specific 1##AK075086|PLAC1|10761|placenta-specific 1##NM_021796|PLAC1|10761|placenta-specific 1##AB541015|FAM122B|159090|family with sequence similarity 122B##AM393279|FAM122B|159090|family with sequence similarity 122B##AK125991|FAM122B|159090|family with sequence similarity 122B##AK292517|FAM122B|159090|family with sequence similarity 122B##AL832218|FAM122B|159090|family with sequence similarity 122B##NM_001170756|FAM122B|159090|family with sequence similarity 122B##NM_145284|FAM122B|159090|family with sequence similarity 122B##AK307219|FAM122C|159091|family with sequence similarity 122C##NM_001170780|FAM122C|159091|family with sequence similarity 122C	0.0	
chrX	64114480	64114605	reg1019487.p1	3.497	+	AK298847 NM_017677 TSC_hg19_v1_chrX_-_63615334	-499199	-	CU680314 TSC_hg19_v1_chrX_-_63615324 BC012399	-499258	-	AK096896 AK300684 NM_130388	-664044	-	TSC_hg19_v1_chrX_-_64139018 AK001547	24499	-	TSC_hg19_v1_chrX_-_64196331 AK022918 AK123763 AK315485 AK222708 AK293570 AF270491 BC004411 AB032992 NM_001178033 NM_018684	81807	-	AK022807 TSC_hg19_v1_chrX_-_64254616 NM_001178032 NM_001243804	140095	-	NM_017677|MTMR8|55613|myotubularin related protein 8##BC012399|MTMR8|55613|myotubularin related protein 8##AK096896|ASB12|142689|ankyrin repeat and SOCS box containing 12##AK300684|ASB12|142689|ankyrin repeat and SOCS box containing 12##NM_130388|ASB12|142689|ankyrin repeat and SOCS box containing 12##AK001547|ZC4H2|55906|zinc finger, C4H2 domain containing##AK022918|ZC4H2|55906|zinc finger, C4H2 domain containing##AK123763|ZC4H2|55906|zinc finger, C4H2 domain containing##AK315485|ZC4H2|55906|zinc finger, C4H2 domain containing##AK222708|ZC4H2|55906|zinc finger, C4H2 domain containing##AK293570|ZC4H2|55906|zinc finger, C4H2 domain containing##AF270491|ZC4H2|55906|zinc finger, C4H2 domain containing##BC004411|ZC4H2|55906|zinc finger, C4H2 domain containing##AB032992|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001178033|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_018684|ZC4H2|55906|zinc finger, C4H2 domain containing##AK022807|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001178032|ZC4H2|55906|zinc finger, C4H2 domain containing##NM_001243804|ZC4H2|55906|zinc finger, C4H2 domain containing	0.196029	
chrX	82913872	82913960	reg1043749.p1	3.497	+	AK314967 NM_000307 TSC_hg19_v1_chrX_+_82763302 X82324 AB464667	-150617	+	TSC_hg19_v1_chrX_+_80457600 BC016709 AL136718 AK129610 AF042081 AK310011 AB590910 CR533478	-2456268	+	TSC_hg19_v1_chrX_+_80457572 AK309351	-2456340	+	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	202255	+	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	529056	-	BC101720 BC101722 BC143522 BX538112 AK055240 AK290050 BX649166 NM_001177478 NM_001177479 NM_144657	843526	-	AK314967|POU3F4|5456|POU class 3 homeobox 4##NM_000307|POU3F4|5456|POU class 3 homeobox 4##X82324|POU3F4|5456|POU class 3 homeobox 4##BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC101720|HDX|139324|highly divergent homeobox##BC101722|HDX|139324|highly divergent homeobox##BC143522|HDX|139324|highly divergent homeobox##BX538112|HDX|139324|highly divergent homeobox##AK055240|HDX|139324|highly divergent homeobox##AK290050|HDX|139324|highly divergent homeobox##BX649166|HDX|139324|highly divergent homeobox##NM_001177478|HDX|139324|highly divergent homeobox##NM_001177479|HDX|139324|highly divergent homeobox##NM_144657|HDX|139324|highly divergent homeobox	0.501694	CTCF.p2:7:0.502
chr10	104375163	104375262	reg1036281.p2	3.496	+	TSC_hg19_v1_chr10_+_104263759 AK312319 BC013291 AF175770 AF144231 AF159447 AY358550 AF222345 AB590231 DQ892586 DQ895804 AF172319	-111393	+	TSC_hg19_v1_chr10_+_104263721 NM_001178133 NM_016169	-111493	+	CU674342 AM393135 DQ892689 DQ895934 AB462953 BC026016 TSC_hg19_v1_chr10_-_104262470 BC000693 Z14978 X82206 AK302072 AK312506 AK297362 AK297620 NM_005736	-112755	-	TSC_hg19_v1_chr10_+_104404226 NM_030912 BC021925 AF281046 AL360160 DQ892019 DQ895209 AF220034	29072	+	TSC_hg19_v1_chr10_-_104474150 U07151 BC009841 AK312525 NM_004311	98885	-	BC022091 NM_178858 TSC_hg19_v1_chr10_+_104474392 AF462052 AK055711 AK308246	99133	+	AK312319|SUFU|51684|suppressor of fused homolog (Drosophila)##BC013291|SUFU|51684|suppressor of fused homolog (Drosophila)##AF175770|SUFU|51684|suppressor of fused homolog (Drosophila)##AF144231|SUFU|51684|suppressor of fused homolog (Drosophila)##AF159447|SUFU|51684|suppressor of fused homolog (Drosophila)##AY358550|SUFU|51684|suppressor of fused homolog (Drosophila)##AF222345|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ892586|SUFU|51684|suppressor of fused homolog (Drosophila)##DQ895804|SUFU|51684|suppressor of fused homolog (Drosophila)##AF172319|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_001178133|SUFU|51684|suppressor of fused homolog (Drosophila)##NM_016169|SUFU|51684|suppressor of fused homolog (Drosophila)##AM393135|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ892689|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##DQ895934|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC026016|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##BC000693|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##Z14978|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##X82206|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK302072|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK312506|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297362|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##AK297620|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_005736|ACTR1A|10121|ARP1 actin-related protein 1 homolog A, centractin alpha (yeast)##NM_030912|TRIM8|81603|tripartite motif containing 8##BC021925|TRIM8|81603|tripartite motif containing 8##AF281046|TRIM8|81603|tripartite motif containing 8##AL360160|TRIM8|81603|tripartite motif containing 8##DQ892019|TRIM8|81603|tripartite motif containing 8##DQ895209|TRIM8|81603|tripartite motif containing 8##AF220034|TRIM8|81603|tripartite motif containing 8##U07151|ARL3|403|ADP-ribosylation factor-like 3##BC009841|ARL3|403|ADP-ribosylation factor-like 3##AK312525|ARL3|403|ADP-ribosylation factor-like 3##NM_004311|ARL3|403|ADP-ribosylation factor-like 3##BC022091|SFXN2|118980|sideroflexin 2##NM_178858|SFXN2|118980|sideroflexin 2##AF462052|SFXN2|118980|sideroflexin 2##AK055711|SFXN2|118980|sideroflexin 2##AK308246|SFXN2|118980|sideroflexin 2	0.97633	CTCF.p2:3:0.976
chr1	240190425	240190523	reg1038691.p1	3.496	+	AF279779 NM_000740	-398102	+	TSC_hg19_v1_chr1_+_239550016 AK056349	-640532	+	AK314151 NM_021186	-2136253	-	TSC_hg19_v1_chr1_+_240255182 NM_020066	64703	+	BC046632 TSC_hg19_v1_chr1_-_240775431	584935	-	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	584980	-	AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##AK314151|ZP4|57829|zona pellucida glycoprotein 4##NM_021186|ZP4|57829|zona pellucida glycoprotein 4##NM_020066|FMN2|56776|formin 2##BC046632|GREM2|64388|gremlin 2##AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2	0.920755	CTCF.p2:-19:0.921
chr14	68785704	68785832	reg1034176.p2	3.496	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-499248	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-502469	-	AK315462 NM_152443	-617166	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	473952	-	NM_001244698 NM_004926	474862	-	NM_001244701 AB528867	477216	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr16	31488129	31488296	reg1045341.p1	3.496	+	TSC_hg19_v1_chr16_+_31484499 BC001507 BC001830 NM_015927	-3701	+	BC041840 BC041817 TSC_hg19_v1_chr16_-_31483467	-4764	-	TSC_hg19_v1_chr16_+_31483494 AK313327 NM_001042454 AK122975 AB464307 BC017288 NM_001164719	-4907	+	BC131542 M95549 NM_003041	6226	+	BC000822 TSC_hg19_v1_chr16_-_31505257	17040	-	TSC_hg19_v1_chr16_-_31519698 BC054514 BC009308 AK222913 AK296166 AK296491 AK304608 AK023930 NM_022744	31455	-	BC001507|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##BC001830|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##NM_015927|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##AK313327|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##NM_001042454|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##AK122975|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##BC017288|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##NM_001164719|TGFB1I1|7041|transforming growth factor beta 1 induced transcript 1##BC131542|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2##M95549|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2##NM_003041|SLC5A2|6524|solute carrier family 5 (sodium/glucose cotransporter), member 2##BC000822|C16orf58|64755|chromosome 16 open reading frame 58##BC009308|C16orf58|64755|chromosome 16 open reading frame 58##AK222913|C16orf58|64755|chromosome 16 open reading frame 58##AK296166|C16orf58|64755|chromosome 16 open reading frame 58##AK296491|C16orf58|64755|chromosome 16 open reading frame 58##AK304608|C16orf58|64755|chromosome 16 open reading frame 58##AK023930|C16orf58|64755|chromosome 16 open reading frame 58##NM_022744|C16orf58|64755|chromosome 16 open reading frame 58	0.0	
chr16	47071533	47071713	reg1003673.p1	3.496	+	TSC_hg19_v1_chr16_-_47007583 AK313031 BC013044 BC015809 NM_005880	-64028	-	CU677459 AF011793 AJ001309 TSC_hg19_v1_chr16_-_47007561	-64101	-	TSC_hg19_v1_chr16_-_47005340 Y13350	-66275	-	AY358718 BC108727 TSC_hg19_v1_chr16_-_47177852 BC098380	106223	-	TSC_hg19_v1_chr16_-_47177902 AK074937 NM_001201477 NM_018092	106299	-	TSC_hg19_v1_chr16_-_47494975 BC006321 DQ893514 DQ896493 AF503339 AK027596	423242	-	AK313031|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC013044|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##BC015809|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##NM_005880|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AJ001309|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##Y13350|DNAJA2|10294|DnaJ (Hsp40) homolog, subfamily A, member 2##AY358718|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC108727|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC098380|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##AK074937|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_001201477|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##NM_018092|NETO2|81831|neuropilin (NRP) and tolloid (TLL)-like 2##BC006321|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ893514|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##DQ896493|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AF503339|ITFG1|81533|integrin alpha FG-GAP repeat containing 1##AK027596|ITFG1|81533|integrin alpha FG-GAP repeat containing 1	0.0	
chr17	46102786	46102874	reg1012513.p2	3.496	+	AF343090 TSC_hg19_v1_chr17_+_46048487 AF110322 AK225274 BC072435 AB062433 BC009957	-54336	+	TSC_hg19_v1_chr17_+_46048471 AF217982 AK023722	-54361	+	AK223387 NM_176096 TSC_hg19_v1_chr17_+_46048452	-54398	+	TSC_hg19_v1_chr17_-_46115160 AB590254 DQ893053 DQ896301 AB047849 BC015924 AB037938 NM_016429	12320	-	TSC_hg19_v1_chr17_+_46125712 NM_003204 BC010623 AK090459	22869	+	AL833530 TSC_hg19_v1_chr17_+_46125724	22894	+	AF343090|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF110322|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK225274|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC072435|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AB062433|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##BC009957|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AF217982|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK023722|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##AK223387|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##NM_176096|CDK5RAP3|80279|CDK5 regulatory subunit associated protein 3##DQ893053|COPZ2|51226|coatomer protein complex, subunit zeta 2##DQ896301|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB047849|COPZ2|51226|coatomer protein complex, subunit zeta 2##BC015924|COPZ2|51226|coatomer protein complex, subunit zeta 2##AB037938|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_016429|COPZ2|51226|coatomer protein complex, subunit zeta 2##NM_003204|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##BC010623|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AK090459|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1##AL833530|NFE2L1|4779|nuclear factor (erythroid-derived 2)-like 1	0.0	
chr18	46862164	46862249	reg1043032.p1	3.496	+	AF010193 NM_001190821 NM_005904	-385126	-	TSC_hg19_v1_chr18_-_46476708 AF015261 AB385184 BC074818 BC074819	-385439	-	AK301535 NM_001190822	-386504	-	TSC_hg19_v1_chr18_-_46987050 AK315091 AK296579 AK291303 BC064394 AK074611 AK091256 AX746878 NM_017653	124845	-	TSC_hg19_v1_chr18_-_47013575 AB097012	151359	-	TSC_hg19_v1_chr18_-_47013599 BC093004	151393	-	AF010193|SMAD7|4092|SMAD family member 7##NM_001190821|SMAD7|4092|SMAD family member 7##NM_005904|SMAD7|4092|SMAD family member 7##AF015261|SMAD7|4092|SMAD family member 7##BC074818|SMAD7|4092|SMAD family member 7##BC074819|SMAD7|4092|SMAD family member 7##AK301535|SMAD7|4092|SMAD family member 7##NM_001190822|SMAD7|4092|SMAD family member 7##AK315091|DYM|54808|dymeclin##AK296579|DYM|54808|dymeclin##AK291303|DYM|54808|dymeclin##BC064394|DYM|54808|dymeclin##AK074611|DYM|54808|dymeclin##AK091256|DYM|54808|dymeclin##NM_017653|DYM|54808|dymeclin##AB097012|C18orf32|497661|chromosome 18 open reading frame 32##BC093004|C18orf32|497661|chromosome 18 open reading frame 32	0.873658	CTCF.p2:31:0.874
chr19	58898196	58898376	reg1040140.p1	3.496	+	TSC_hg19_v1_chr19_-_58892398 BC029960 NM_001129730 NM_138466	-5870	-	BC118983 BC125273 AK124712 AK125350 TSC_hg19_v1_chr19_-_58874199 AK126727 AK172804 AK131209 NM_001207009 NM_198458	-24104	-	TSC_hg19_v1_chr19_-_58864830 AK289417 AF414429 AK055885 AB073611 NM_130786	-33444	-	TSC_hg19_v1_chr19_+_58898635 AK223106 AK311938 D28455 NM_001009 BC015405 BC018828 BC018151 BC035830 U14970	366	+	NM_001195135	9170	+	TSC_hg19_v1_chr19_+_58920045 AK290068 BC033149 NM_173548	21761	+	BC029960|ZNF837|116412|zinc finger protein 837##NM_001129730|ZNF837|116412|zinc finger protein 837##NM_138466|ZNF837|116412|zinc finger protein 837##BC118983|ZNF497|162968|zinc finger protein 497##BC125273|ZNF497|162968|zinc finger protein 497##AK126727|ZNF497|162968|zinc finger protein 497##AK131209|ZNF497|162968|zinc finger protein 497##NM_001207009|ZNF497|162968|zinc finger protein 497##NM_198458|ZNF497|162968|zinc finger protein 497##AK289417|A1BG|1|alpha-1-B glycoprotein##AF414429|A1BG|1|alpha-1-B glycoprotein##AK055885|A1BG|1|alpha-1-B glycoprotein##AB073611|A1BG|1|alpha-1-B glycoprotein##NM_130786|A1BG|1|alpha-1-B glycoprotein##AK223106|RPS5|6193|ribosomal protein S5##AK311938|RPS5|6193|ribosomal protein S5##D28455|RPS5|6193|ribosomal protein S5##NM_001009|RPS5|6193|ribosomal protein S5##BC015405|RPS5|6193|ribosomal protein S5##BC018828|RPS5|6193|ribosomal protein S5##BC018151|RPS5|6193|ribosomal protein S5##BC035830|RPS5|6193|ribosomal protein S5##U14970|RPS5|6193|ribosomal protein S5##NM_001195135|LOC646862|646862|uncharacterized LOC646862##AK290068|ZNF584|201514|zinc finger protein 584##BC033149|ZNF584|201514|zinc finger protein 584##NM_173548|ZNF584|201514|zinc finger protein 584	0.0	
chr3	174993276	174993435	reg1039602.p1	3.496	+	AJ607396 AK308416 AL832144 NM_207015 BC057243	-416265	+	TSC_hg19_v1_chr3_+_174158663 AJ607400 AJ607401	-834635	+	BC032555 NM_014932	-1877112	+	TSC_hg19_v1_chr3_-_176914267 BX648935	1920895	-	TSC_hg19_v1_chr3_-_176914952 AF268193 AK296946	1921596	-	AK022956 TSC_hg19_v1_chr3_-_176915017 BC060320 NM_024665	1921704	-	AJ607396|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AK308416|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AL832144|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##NM_207015|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC057243|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607400|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##AJ607401|NAALADL2|254827|N-acetylated alpha-linked acidic dipeptidase-like 2##BC032555|NLGN1|22871|neuroligin 1##NM_014932|NLGN1|22871|neuroligin 1##BX648935|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AF268193|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK296946|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##AK022956|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##BC060320|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1##NM_024665|TBL1XR1|79718|transducin (beta)-like 1 X-linked receptor 1	0.307762	CTCF.p2:-6:0.308
chr4	38859374	38859555	reg1036361.p1	3.496	+	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	-1036	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	-53045	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	-74865	-	TSC_hg19_v1_chr4_+_38869390 NM_138389 AK304050 AK296859 AK292831 BC040452	9927	+	BC030803 BC060512 AK026888 NM_024943	174546	-	TSC_hg19_v1_chr4_+_39046535 NM_001007075 NM_001171654 BC053860 AB208820	186974	+	AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##NM_138389|FAM114A1|92689|family with sequence similarity 114, member A1##AK304050|FAM114A1|92689|family with sequence similarity 114, member A1##AK296859|FAM114A1|92689|family with sequence similarity 114, member A1##AK292831|FAM114A1|92689|family with sequence similarity 114, member A1##BC040452|FAM114A1|92689|family with sequence similarity 114, member A1##BC030803|TMEM156|80008|transmembrane protein 156##BC060512|TMEM156|80008|transmembrane protein 156##AK026888|TMEM156|80008|transmembrane protein 156##NM_024943|TMEM156|80008|transmembrane protein 156##NM_001007075|KLHL5|51088|kelch-like 5 (Drosophila)##NM_001171654|KLHL5|51088|kelch-like 5 (Drosophila)##BC053860|KLHL5|51088|kelch-like 5 (Drosophila)##AB208820|KLHL5|51088|kelch-like 5 (Drosophila)	0.0	
chr5	106724946	106725073	reg1032478.p2	3.496	+	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-3826528	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4130552	+	BC024591 NM_015216 AB463068	-4259735	+	AK308672 NM_001962 U26403	281581	-	TSC_hg19_v1_chr5_-_107717106 AK126722	992121	-	BC063316 NM_001163315	992789	-	AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##BC024591|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##NM_015216|PPIP5K2|23262|diphosphoinositol pentakisphosphate kinase 2##AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17	0.0	
chr5	124342008	124342145	reg1036113.p2	3.496	+	BC131507 AB033107 BC151226 NM_020747	-261288	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1494194	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1582932	-	NM_001146319 AK316288 AK300154	1353738	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1416767	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	1417111	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.0	
chr5	142686031	142686163	reg1040331.p1	3.496	+	NM_001135608 NM_015071 AB463225 TSC_hg19_v1_chr5_+_142150324 CU686665	-535789	+	TSC_hg19_v1_chr5_+_142149971 BC068555	-536125	+	M60515 AK289762 TSC_hg19_v1_chr5_-_142077587 DQ655917 NM_001144934 NM_001144935	-608526	-	TSC_hg19_v1_chr5_-_142782756 AK314789 X03225 X03348	96726	-	TSC_hg19_v1_chr5_-_142783064 AK223594 AJ877170 AJ877171 AJ877172	97009	-	BC015610 TSC_hg19_v1_chr5_-_142783214	97114	-	NM_001135608|ARHGAP26|23092|Rho GTPase activating protein 26##NM_015071|ARHGAP26|23092|Rho GTPase activating protein 26##BC068555|ARHGAP26|23092|Rho GTPase activating protein 26##M60515|FGF1|2246|fibroblast growth factor 1 (acidic)##AK289762|FGF1|2246|fibroblast growth factor 1 (acidic)##DQ655917|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144934|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144935|FGF1|2246|fibroblast growth factor 1 (acidic)##AK314789|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03225|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##X03348|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK223594|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877170|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877171|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877172|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BC015610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)	0.0	
chr5	142826711	142826818	reg1042190.p1	3.496	+	NM_001018074 NM_001018075 NM_001018077	-11688	-	TSC_hg19_v1_chr5_-_142784107 BX640610 AJ877167	-42598	-	TSC_hg19_v1_chr5_-_142784036 AK302050 NM_001018076	-42732	-	AF103884 NM_021182 BC096711 BC098145 BC098244 BC098251 BC104412 BC104413 BC113894 BC113971	364994	+	TSC_hg19_v1_chr5_-_143550130 AK223515 AK307251	723371	-	TSC_hg19_v1_chr5_-_143550202 AY358863 AF318329 AK124065 AY640925 AY640926 AY640927 AY640928 AY640929 AY640934 BC007829 AY037152 AK054576 BC024737	723412	-	NM_001018074|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018075|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018077|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##BX640610|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AJ877167|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AK302050|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##NM_001018076|NR3C1|2908|nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)##AF103884|HMHB1|57824|histocompatibility (minor) HB-1##NM_021182|HMHB1|57824|histocompatibility (minor) HB-1##BC096711|HMHB1|57824|histocompatibility (minor) HB-1##BC098145|HMHB1|57824|histocompatibility (minor) HB-1##BC098244|HMHB1|57824|histocompatibility (minor) HB-1##BC098251|HMHB1|57824|histocompatibility (minor) HB-1##BC104412|HMHB1|57824|histocompatibility (minor) HB-1##BC104413|HMHB1|57824|histocompatibility (minor) HB-1##BC113894|HMHB1|57824|histocompatibility (minor) HB-1##BC113971|HMHB1|57824|histocompatibility (minor) HB-1##AK223515|YIPF5|81555|Yip1 domain family, member 5##AK307251|YIPF5|81555|Yip1 domain family, member 5##AY358863|YIPF5|81555|Yip1 domain family, member 5##AF318329|YIPF5|81555|Yip1 domain family, member 5##AK124065|YIPF5|81555|Yip1 domain family, member 5##AY640925|YIPF5|81555|Yip1 domain family, member 5##AY640926|YIPF5|81555|Yip1 domain family, member 5##AY640927|YIPF5|81555|Yip1 domain family, member 5##AY640928|YIPF5|81555|Yip1 domain family, member 5##AY640929|YIPF5|81555|Yip1 domain family, member 5##AY640934|YIPF5|81555|Yip1 domain family, member 5##BC007829|YIPF5|81555|Yip1 domain family, member 5##AY037152|YIPF5|81555|Yip1 domain family, member 5##AK054576|YIPF5|81555|Yip1 domain family, member 5##BC024737|YIPF5|81555|Yip1 domain family, member 5	0.0	
chr5	79553125	79553278	reg1038700.p1	3.496	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	-1316	-	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-222037	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-266243	-	NM_032567 AK098575 AK314007 AF333098 BC033798	62614	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	150652	+	AY358256 NM_205548 BC142990 TSC_hg19_v1_chr5_+_79783828 BC131563	230632	+	BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AY358256|FAM151B|167555|family with sequence similarity 151, member B##NM_205548|FAM151B|167555|family with sequence similarity 151, member B##BC142990|FAM151B|167555|family with sequence similarity 151, member B##BC131563|FAM151B|167555|family with sequence similarity 151, member B	0.0	
chr6	37513959	37514139	reg1038505.p1	3.496	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-46353	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-46397	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-110612	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	151657	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	273241	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	273641	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.951364	CTCF.p2:-29:0.951
chr8	137085107	137085184	reg1038526.p2	3.496	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-614944	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-615487	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1359871	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2423961	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2841099	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3630137	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.0	
chr8	137462775	137462956	reg1032708.p1	3.496	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-992664	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-993207	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1737591	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2046241	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2463379	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3252417	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.0	
chr9	26723646	26723757	reg1037197.p1	3.496	+	AK131322 NM_001004352	-657029	+	NM_001004125	-1044846	-	BC017510 TSC_hg19_v1_chr9_-_25678278 BC046919 AY168647 BC110824	-1045368	-	AB590748 CU687198 BC071953 TSC_hg19_v1_chr9_-_26892779 AK023719 BC014658 NM_001167575 NM_024828	169068	-	EU176453 EU176795 AB385043 TSC_hg19_v1_chr9_-_26947158 BC032551 AK022761	223403	-	TSC_hg19_v1_chr9_-_26947165 AK001642	223467	-	AK131322|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004352|LOC100506422|100506422|putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323##NM_001004125|TUSC1|286319|tumor suppressor candidate 1##BC017510|TUSC1|286319|tumor suppressor candidate 1##BC046919|TUSC1|286319|tumor suppressor candidate 1##AY168647|TUSC1|286319|tumor suppressor candidate 1##BC110824|TUSC1|286319|tumor suppressor candidate 1##BC071953|C9orf82|79886|chromosome 9 open reading frame 82##AK023719|C9orf82|79886|chromosome 9 open reading frame 82##BC014658|C9orf82|79886|chromosome 9 open reading frame 82##NM_001167575|C9orf82|79886|chromosome 9 open reading frame 82##NM_024828|C9orf82|79886|chromosome 9 open reading frame 82##EU176453|PLAA|9373|phospholipase A2-activating protein##EU176795|PLAA|9373|phospholipase A2-activating protein##BC032551|PLAA|9373|phospholipase A2-activating protein##AK022761|PLAA|9373|phospholipase A2-activating protein##AK001642|PLAA|9373|phospholipase A2-activating protein	0.992227	CTCF.p2:-20:0.992
chrX	139783793	139783894	reg1036362.p2	3.496	+	NM_005634 TSC_hg19_v1_chrX_-_139587235 AK313820 BC093863 BC093865	-196591	-	BC137148 BC137149 NM_001013403	-736167	-	BC132728 BC132730 AJ580093 AJ580094 NM_001010986 NM_173694	-869428	-	TSC_hg19_v1_chrX_+_139791923 AK054978	8084	+	M16965 M16965 BC113472 BC113472 BC113474 BC113474 NM_004065	82809	-	AF098307 AJ457796 NM_032461 NM_139019 NM_145664 BC034472 BC137533 BC137536 BC144689 AB590442 DQ892330 DQ895534	300963	+	NM_005634|SOX3|6658|SRY (sex determining region Y)-box 3##BC093863|SOX3|6658|SRY (sex determining region Y)-box 3##BC093865|SOX3|6658|SRY (sex determining region Y)-box 3##BC137148|CXorf66|347487|chromosome X open reading frame 66##BC137149|CXorf66|347487|chromosome X open reading frame 66##NM_001013403|CXorf66|347487|chromosome X open reading frame 66##BC132728|ATP11C|286410|ATPase, class VI, type 11C##BC132730|ATP11C|286410|ATPase, class VI, type 11C##AJ580093|ATP11C|286410|ATPase, class VI, type 11C##AJ580094|ATP11C|286410|ATPase, class VI, type 11C##NM_001010986|ATP11C|286410|ATPase, class VI, type 11C##NM_173694|ATP11C|286410|ATPase, class VI, type 11C##AK054978|RP1-177G6.2|286411|uncharacterized LOC286411##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##M16965|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113472|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##BC113474|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##NM_004065|CDR1|1038|cerebellar degeneration-related protein 1, 34kDa##AF098307|SPANXB1|728695|SPANX family, member B1##AJ457796|SPANXF1|171490|SPANX family, member F1##NM_032461|SPANXB1|728695|SPANX family, member B1##NM_139019|SPANXF1|171490|SPANX family, member F1##NM_145664|SPANXB2|100133171|SPANX family, member B2##BC034472|SPANXB1|728695|SPANX family, member B1##BC137533|SPANXB1|728695|SPANX family, member B1##BC137536|SPANXB1|728695|SPANX family, member B1##DQ892330|SPANXB1|728695|SPANX family, member B1##DQ895534|SPANXB1|728695|SPANX family, member B1	0.981101	CTCF.p2:-16:0.981
chr1	11714609	11714705	reg1041872.p2	3.495	+	BC025233 TSC_hg19_v1_chr1_-_11714487 AK313019 BC096747 BC014957	-169	-	AK055344 NM_183412	-226	+	AB463629 CR542110 CU692940 DQ892848 DQ892849 DQ896095 TSC_hg19_v1_chr1_-_11714417	-251	-	AF187318 NM_012168	155	-	TSC_hg19_v1_chr1_+_11714940 NM_001014765 NM_033182 NM_183413 CR749368 AK296025 AK301418 AK316284 AK316347 AY040878 AK293721 BC007832 AK294053	264	+	TSC_hg19_v1_chr1_+_11724261 AK314989 NM_018438 AF129536 BC020880	9550	+	BC025233|FBXO2|26232|F-box protein 2##AK313019|FBXO2|26232|F-box protein 2##BC096747|FBXO2|26232|F-box protein 2##BC014957|FBXO2|26232|F-box protein 2##AK055344|FBXO44|93611|F-box protein 44##NM_183412|FBXO44|93611|F-box protein 44##CR542110|FBXO2|26232|F-box protein 2##DQ892848|FBXO2|26232|F-box protein 2##DQ892849|FBXO2|26232|F-box protein 2##DQ896095|FBXO2|26232|F-box protein 2##AF187318|FBXO2|26232|F-box protein 2##NM_012168|FBXO2|26232|F-box protein 2##NM_001014765|FBXO44|93611|F-box protein 44##NM_033182|FBXO44|93611|F-box protein 44##NM_183413|FBXO44|93611|F-box protein 44##CR749368|FBXO44|93611|F-box protein 44##AK296025|FBXO44|93611|F-box protein 44##AK301418|FBXO44|93611|F-box protein 44##AK316284|FBXO44|93611|F-box protein 44##AK316347|FBXO44|93611|F-box protein 44##AY040878|FBXO44|93611|F-box protein 44##AK293721|FBXO44|93611|F-box protein 44##BC007832|FBXO44|93611|F-box protein 44##AK294053|FBXO44|93611|F-box protein 44##AK314989|FBXO6|26270|F-box protein 6##NM_018438|FBXO6|26270|F-box protein 6##AF129536|FBXO6|26270|F-box protein 6##BC020880|FBXO6|26270|F-box protein 6	0.0	
chr1	153940281	153940387	reg1036017.p1	3.495	+	BC014303 NM_014437	-147	-	BC047288 BC069261 TSC_hg19_v1_chr1_-_153936009 BC007886 BC002563 AJ243649 AJ271671 AK293389 AK297983 AK300244 AK075257	-4336	-	CR457217 DQ893619 DQ895350 CU675849 CU678404 BC003152 AF132942 TSC_hg19_v1_chr1_-_153935228	-5125	-	AK297703 TSC_hg19_v1_chr1_+_153940377 AY049977 AK309767 AK304665 AB052778 NM_130898 BC038962	40	+	AF151056 AF131797 TSC_hg19_v1_chr1_-_153950108 BC001667 BC019277 BC000996	9728	-	BC004239 TSC_hg19_v1_chr1_-_153950119	9783	-	BC014303|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##NM_014437|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##BC047288|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##BC069261|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##BC007886|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##BC002563|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##AJ243649|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##AJ271671|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##AK293389|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##AK297983|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##AK300244|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##AK075257|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##CR457217|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##DQ893619|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##DQ895350|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##BC003152|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##AF132942|SLC39A1|27173|solute carrier family 39 (zinc transporter), member 1##AK297703|CREB3L4|148327|cAMP responsive element binding protein 3-like 4##AY049977|CREB3L4|148327|cAMP responsive element binding protein 3-like 4##AK304665|CREB3L4|148327|cAMP responsive element binding protein 3-like 4##AB052778|CREB3L4|148327|cAMP responsive element binding protein 3-like 4##NM_130898|CREB3L4|148327|cAMP responsive element binding protein 3-like 4##BC038962|CREB3L4|148327|cAMP responsive element binding protein 3-like 4##AF151056|JTB|10899|jumping translocation breakpoint##AF131797|JTB|10899|jumping translocation breakpoint##BC001667|JTB|10899|jumping translocation breakpoint##BC019277|JTB|10899|jumping translocation breakpoint##BC000996|JTB|10899|jumping translocation breakpoint##BC004239|JTB|10899|jumping translocation breakpoint	0.033302	
chr12	57486588	57486769	reg1015615.p1	3.495	+	TSC_hg19_v1_chr12_+_57482929 BC007756 AB463930 CU688106	-3691	+	TSC_hg19_v1_chr12_+_57482900 BC065931 AK314229 U48361	-3776	+	TSC_hg19_v1_chr12_+_57482684 NM_005967	-3999	+	AK291044 NM_001178079	17410	-	TSC_hg19_v1_chr12_-_57505013 AK316236 BC075852 AK298721 AK312471 U16031	18327	-	TSC_hg19_v1_chr12_-_57505144 AK290431 AK299094 AK316142 BC004973 BC005823	18467	-	BC007756|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##BC065931|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##AK314229|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##U48361|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##NM_005967|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##AK291044|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178079|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK316236|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC075852|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK298721|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK312471|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##U16031|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK290431|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK299094|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK316142|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC004973|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC005823|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced	0.0	
chr14	72639836	72639997	reg1041309.p2	3.495	+	NM_001204416 NM_001204417 NM_001204418 NM_001204419 NM_001204420 NM_001204421 NM_001204422 NM_004296 AF073920 BC104877 BC113572 BC143699 AB209462	-240050	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	-240763	+	AK294895 NM_001204423	-241100	+	TSC_hg19_v1_chr14_-_73360810 AY803021 CU687430 EU446740 AK024141 AK294425 BC026305 BC060801 NM_012074	720892	-	AK315499 NM_001163508 NM_001163509 NM_015604 NM_181340 NM_181341 BX161489 AK297571 TSC_hg19_v1_chr14_+_73393208 BC035901 AK300786 AK027745 AK297742 BX247962 BC018979	753219	+	AK098542 AF311602 NM_178441	813741	-	NM_001204416|RGS6|9628|regulator of G-protein signaling 6##NM_001204417|RGS6|9628|regulator of G-protein signaling 6##NM_001204418|RGS6|9628|regulator of G-protein signaling 6##NM_001204419|RGS6|9628|regulator of G-protein signaling 6##NM_001204420|RGS6|9628|regulator of G-protein signaling 6##NM_001204421|RGS6|9628|regulator of G-protein signaling 6##NM_001204422|RGS6|9628|regulator of G-protein signaling 6##NM_004296|RGS6|9628|regulator of G-protein signaling 6##AF073920|RGS6|9628|regulator of G-protein signaling 6##BC104877|RGS6|9628|regulator of G-protein signaling 6##BC113572|RGS6|9628|regulator of G-protein signaling 6##BC143699|RGS6|9628|regulator of G-protein signaling 6##AB209462|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AY803021|DPF3|8110|D4, zinc and double PHD fingers, family 3##EU446740|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK024141|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK294425|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC026305|DPF3|8110|D4, zinc and double PHD fingers, family 3##BC060801|DPF3|8110|D4, zinc and double PHD fingers, family 3##NM_012074|DPF3|8110|D4, zinc and double PHD fingers, family 3##AK315499|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163508|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_001163509|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_015604|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181340|DCAF4|26094|DDB1 and CUL4 associated factor 4##NM_181341|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX161489|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297571|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC035901|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK300786|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK027745|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK297742|DCAF4|26094|DDB1 and CUL4 associated factor 4##BX247962|DCAF4|26094|DDB1 and CUL4 associated factor 4##BC018979|DCAF4|26094|DDB1 and CUL4 associated factor 4##AK098542|ZFYVE1|53349|zinc finger, FYVE domain containing 1##AF311602|ZFYVE1|53349|zinc finger, FYVE domain containing 1##NM_178441|ZFYVE1|53349|zinc finger, FYVE domain containing 1	0.0	
chr14	75898627	75898721	reg1039961.p1	3.495	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	-3661	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	-4033	+	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	-153092	+	BC051303 NM_001135049	162	+	TSC_hg19_v1_chr14_+_75988794 NM_006399 BC032294 U15460	90116	+	TSC_hg19_v1_chr14_+_75988840 D42106	90178	+	NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC051303|JDP2|122953|Jun dimerization protein 2##NM_001135049|JDP2|122953|Jun dimerization protein 2##NM_006399|BATF|10538|basic leucine zipper transcription factor, ATF-like##BC032294|BATF|10538|basic leucine zipper transcription factor, ATF-like##U15460|BATF|10538|basic leucine zipper transcription factor, ATF-like##D42106|BATF|10538|basic leucine zipper transcription factor, ATF-like	0.0	
chr1	6854525	6854641	reg1012823.p2	3.495	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-9092	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-92652	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-92701	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	976793	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	989826	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	990242	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.0	
chr19	49618492	49618673	reg1042598.p1	3.495	+	TSC_hg19_v1_chr19_+_49617635 BC027618 AF311862 AB528696	-937	+	TSC_hg19_v1_chr19_+_49617626 AY358744 NM_022165	-964	+	TSC_hg19_v1_chr19_+_49607925 X06814	-10636	+	CU690794 BC051004 AK001352 BC069669 BC069693 BC069712 BC069750 NM_018111	3755	-	TSC_hg19_v1_chr19_+_49622818 AB014554 NM_003660 BC101518 BC101520 BC143470 AK289757	4137	+	BC112355 TSC_hg19_v1_chr19_-_49658663 BC069795 BC069802 M60052 AK300706 BC094691 NM_002152	40080	-	BC027618|LIN7B|64130|lin-7 homolog B (C. elegans)##AF311862|LIN7B|64130|lin-7 homolog B (C. elegans)##AY358744|LIN7B|64130|lin-7 homolog B (C. elegans)##NM_022165|LIN7B|64130|lin-7 homolog B (C. elegans)##X06814|SNRNP70|6625|small nuclear ribonucleoprotein 70kDa (U1)##BC051004|C19orf73|55150|chromosome 19 open reading frame 73##AK001352|C19orf73|55150|chromosome 19 open reading frame 73##BC069669|C19orf73|55150|chromosome 19 open reading frame 73##BC069693|C19orf73|55150|chromosome 19 open reading frame 73##BC069712|C19orf73|55150|chromosome 19 open reading frame 73##BC069750|C19orf73|55150|chromosome 19 open reading frame 73##NM_018111|C19orf73|55150|chromosome 19 open reading frame 73##AB014554|PPFIA3|8541|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3##NM_003660|PPFIA3|8541|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3##BC101518|PPFIA3|8541|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3##BC101520|PPFIA3|8541|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3##BC143470|PPFIA3|8541|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3##AK289757|PPFIA3|8541|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 3##BC112355|HRC|3270|histidine rich calcium binding protein##BC069795|HRC|3270|histidine rich calcium binding protein##BC069802|HRC|3270|histidine rich calcium binding protein##M60052|HRC|3270|histidine rich calcium binding protein##AK300706|HRC|3270|histidine rich calcium binding protein##BC094691|HRC|3270|histidine rich calcium binding protein##NM_002152|HRC|3270|histidine rich calcium binding protein	0.0	
chr20	49488216	49488366	reg1036824.p2	3.495	+	AF361220 NM_001010974 NM_017843 NM_198799 TSC_hg19_v1_chr20_+_49411542 AK000502 BC038381 BC047337 AJ511266 BC056883	-76773	+	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	-140222	+	TSC_hg19_v1_chr20_-_49308074 AK124347	-180214	-	TSC_hg19_v1_chr20_-_49547964 AF250860 NM_015339 NM_181442 BC075794	59432	-	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	86772	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	87077	+	AF361220|BCAS4|55653|breast carcinoma amplified sequence 4##NM_001010974|BCAS4|55653|breast carcinoma amplified sequence 4##NM_017843|BCAS4|55653|breast carcinoma amplified sequence 4##NM_198799|BCAS4|55653|breast carcinoma amplified sequence 4##AK000502|BCAS4|55653|breast carcinoma amplified sequence 4##BC038381|BCAS4|55653|breast carcinoma amplified sequence 4##BC047337|BCAS4|55653|breast carcinoma amplified sequence 4##AJ511266|BCAS4|55653|breast carcinoma amplified sequence 4##BC056883|BCAS4|55653|breast carcinoma amplified sequence 4##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##AF250860|ADNP|23394|activity-dependent neuroprotector homeobox##NM_015339|ADNP|23394|activity-dependent neuroprotector homeobox##NM_181442|ADNP|23394|activity-dependent neuroprotector homeobox##BC075794|ADNP|23394|activity-dependent neuroprotector homeobox##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3	0.0	
chr22	18506802	18506905	reg1010245.p2	3.495	+	TSC_hg19_v1_chr22_-_18484268 AK127487	-22625	-	TSC_hg19_v1_chr22_-_18257284 BC002483 BC022072 NM_001196 NM_001244569 NM_001244570 NM_197967 EU678293 EU678294 NM_001244567	-249519	-	TSC_hg19_v1_chr22_-_18257223 BC009197 AF087891 AF042083	-249630	-	TSC_hg19_v1_chr22_-_18507301 AK295978 AK122725 NM_001122731 NM_001136004 NM_015241	408	-	TSC_hg19_v1_chr22_+_18560749 AK000065 NM_001199319 NM_017929 AK000702	53835	+	TSC_hg19_v1_chr22_+_18560755 NM_001127649 BC016280 BC047320	53914	+	AK127487|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##BC022072|BID|637|BH3 interacting domain death agonist##NM_001196|BID|637|BH3 interacting domain death agonist##NM_001244569|BID|637|BH3 interacting domain death agonist##NM_001244570|BID|637|BH3 interacting domain death agonist##NM_197967|BID|637|BH3 interacting domain death agonist##EU678293|BID|637|BH3 interacting domain death agonist##EU678294|BID|637|BH3 interacting domain death agonist##NM_001244567|BID|637|BH3 interacting domain death agonist##BC009197|BID|637|BH3 interacting domain death agonist##AF087891|BID|637|BH3 interacting domain death agonist##AF042083|BID|637|BH3 interacting domain death agonist##AK295978|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001122731|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_001136004|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##NM_015241|MICAL3|57553|microtubule associated monoxygenase, calponin and LIM domain containing 3##AK000065|PEX26|55670|peroxisomal biogenesis factor 26##NM_001199319|PEX26|55670|peroxisomal biogenesis factor 26##NM_017929|PEX26|55670|peroxisomal biogenesis factor 26##AK000702|PEX26|55670|peroxisomal biogenesis factor 26##NM_001127649|PEX26|55670|peroxisomal biogenesis factor 26##BC016280|PEX26|55670|peroxisomal biogenesis factor 26##BC047320|PEX26|55670|peroxisomal biogenesis factor 26	0.0	
chr22	45831464	45831597	reg1000851.p1	3.495	+	TSC_hg19_v1_chr22_+_45809599 BC003024 BC009904 AL442116	-21902	+	TSC_hg19_v1_chr22_+_45809579 AK098586 NM_015653 AK225722	-21961	+	TSC_hg19_v1_chr22_-_45809502 BC126208 AJ504806 NM_148674	-22046	-	TSC_hg19_v1_chr22_+_45898762 NM_001996 NM_006485 NM_006486 NM_006487 AK075566 AK075460 AK300806 AK316291 BC022497 AF217999 AF126110 U01244 X53741 X53742 X53743 AB528743 DQ894047	67246	+	NM_001167621 NM_013236 AK294348 TSC_hg19_v1_chr22_+_46067713	236165	+	TSC_hg19_v1_chr22_+_46067733 AF086923 AL050282	236199	+	BC003024|RIBC2|26150|RIB43A domain with coiled-coils 2##BC009904|RIBC2|26150|RIB43A domain with coiled-coils 2##AL442116|RIBC2|26150|RIB43A domain with coiled-coils 2##AK098586|RIBC2|26150|RIB43A domain with coiled-coils 2##NM_015653|RIBC2|26150|RIB43A domain with coiled-coils 2##AK225722|RIBC2|26150|RIB43A domain with coiled-coils 2##BC126208|SMC1B|27127|structural maintenance of chromosomes 1B##AJ504806|SMC1B|27127|structural maintenance of chromosomes 1B##NM_148674|SMC1B|27127|structural maintenance of chromosomes 1B##NM_001996|FBLN1|2192|fibulin 1##NM_006485|FBLN1|2192|fibulin 1##NM_006486|FBLN1|2192|fibulin 1##NM_006487|FBLN1|2192|fibulin 1##AK075566|FBLN1|2192|fibulin 1##AK075460|FBLN1|2192|fibulin 1##AK300806|FBLN1|2192|fibulin 1##AK316291|FBLN1|2192|fibulin 1##BC022497|FBLN1|2192|fibulin 1##AF217999|FBLN1|2192|fibulin 1##AF126110|FBLN1|2192|fibulin 1##U01244|FBLN1|2192|fibulin 1##X53741|FBLN1|2192|fibulin 1##X53742|FBLN1|2192|fibulin 1##X53743|FBLN1|2192|fibulin 1##DQ894047|FBLN1|2192|fibulin 1##NM_001167621|ATXN10|25814|ataxin 10##NM_013236|ATXN10|25814|ataxin 10##AK294348|ATXN10|25814|ataxin 10##AF086923|ATXN10|25814|ataxin 10##AL050282|ATXN10|25814|ataxin 10	0.0	
chr3	137707938	137708118	reg1036783.p1	3.495	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	-224881	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-1031198	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-1058691	+	AK098474 NM_001002026 AF349452	9651	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	20975	+	AK057406 NM_001170538	124293	-	NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18##AK057406|DZIP1L|199221|DAZ interacting protein 1-like##NM_001170538|DZIP1L|199221|DAZ interacting protein 1-like	0.0	
chr3	193849068	193849227	reg1032076.p2	3.495	+	TSC_hg19_v1_chr3_+_193311166 AB385350	-537982	+	TSC_hg19_v1_chr3_+_193311006 BC043443 BC075805 AB011139	-538080	+	TSC_hg19_v1_chr3_+_193310928 NM_015560 NM_130831 NM_130832 NM_130833 NM_130834 NM_130835 NM_130836 NM_130837	-538192	+	NM_005524 TSC_hg19_v1_chr3_+_193853936 AK000415	4786	+	TSC_hg19_v1_chr3_+_193853938 AK300482 BC039152	4808	+	BC031569 BC042334 TSC_hg19_v1_chr3_-_194072058 BC137398 BC137403 NM_001080513	222927	-	BC043443|OPA1|4976|optic atrophy 1 (autosomal dominant)##BC075805|OPA1|4976|optic atrophy 1 (autosomal dominant)##AB011139|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_015560|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130831|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130832|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130833|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130834|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130835|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130836|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_130837|OPA1|4976|optic atrophy 1 (autosomal dominant)##NM_005524|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK000415|HES1|3280|hairy and enhancer of split 1, (Drosophila)##AK300482|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC039152|HES1|3280|hairy and enhancer of split 1, (Drosophila)##BC031569|CPN2|1370|carboxypeptidase N, polypeptide 2##BC042334|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137398|CPN2|1370|carboxypeptidase N, polypeptide 2##BC137403|CPN2|1370|carboxypeptidase N, polypeptide 2##NM_001080513|CPN2|1370|carboxypeptidase N, polypeptide 2	0.0	
chr5	10146123	10146287	reg1042416.p2	3.495	+	BC095521 NM_019599	-515743	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	-600011	-	TSC_hg19_v1_chr5_+_7869306 BC062577	-2276895	+	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	103779	-	AK300042 TSC_hg19_v1_chr5_-_10250001 AK316317 AK055604 AK302012 NM_199133	103800	-	NM_012073 AK302368 TSC_hg19_v1_chr5_+_10250368	104120	+	BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC063406|FAM173B|134145|family with sequence similarity 173, member B##AK300042|FAM173B|134145|family with sequence similarity 173, member B##AK316317|FAM173B|134145|family with sequence similarity 173, member B##AK055604|FAM173B|134145|family with sequence similarity 173, member B##AK302012|FAM173B|134145|family with sequence similarity 173, member B##NM_199133|FAM173B|134145|family with sequence similarity 173, member B##NM_012073|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK302368|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)	0.999667	CTCF.p2:-15:1.000
chr5	107148390	107148563	reg1029619.p2	3.495	+	AK308672 NM_001962 U26403	-141886	-	TSC_hg19_v1_chr5_-_102898491 AL136592 AK098066 BC041099 AK304010 NM_031438 AK309942 BC042967	-4249995	-	TSC_hg19_v1_chr5_+_102594465 BC009203 NM_033211 AK058020 AF038182	-4554019	+	TSC_hg19_v1_chr5_-_107717106 AK126722	568654	-	BC063316 NM_001163315	569322	-	BC011940 TSC_hg19_v1_chr5_-_108063984 AB593118 AK126449	915504	-	AK308672|EFNA5|1946|ephrin-A5##NM_001962|EFNA5|1946|ephrin-A5##U26403|EFNA5|1946|ephrin-A5##AL136592|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK098066|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC041099|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK304010|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##NM_031438|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##AK309942|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC042967|NUDT12|83594|nudix (nucleoside diphosphate linked moiety X)-type motif 12##BC009203|C5orf30|90355|chromosome 5 open reading frame 30##NM_033211|C5orf30|90355|chromosome 5 open reading frame 30##AK058020|C5orf30|90355|chromosome 5 open reading frame 30##AF038182|C5orf30|90355|chromosome 5 open reading frame 30##AK126722|FBXL17|64839|F-box and leucine-rich repeat protein 17##BC063316|FBXL17|64839|F-box and leucine-rich repeat protein 17##NM_001163315|FBXL17|64839|F-box and leucine-rich repeat protein 17##AB593118|HP07349|100652853|uncharacterized protein HP07349	0.0	
chr5	174887168	174887286	reg1037503.p1	3.495	+	NM_000794	-16065	-	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	-735615	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-1414475	+	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	18335	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	197811	+	TSC_hg19_v1_chr5_+_175085101 AB023487	197884	+	NM_000794|DRD1|1812|dopamine receptor D1##NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2##AB023487|HRH2|3274|histamine receptor H2	0.453316	CTCF.p2:18:0.453
chr6	14785411	14785526	reg1038126.p1	3.495	+	AK223315 AK290426 TSC_hg19_v1_chr6_+_14118002 AK307059 AK309541 DQ892356 DQ895563 Z11697 CU689036 BT019498 CR457019	-667446	+	TSC_hg19_v1_chr6_+_14117869 NM_001040280 NM_004233 BC030830 BC004351	-667563	+	NM_001251901	-667982	+	TSC_hg19_v1_chr6_+_15245702 AK302624	460249	+	TSC_hg19_v1_chr6_+_15246300 AK292861 BC046246 NM_004973 U57592	460944	+	BC033996 TSC_hg19_v1_chr6_-_15248900	463433	-	AK223315|CD83|9308|CD83 molecule##AK290426|CD83|9308|CD83 molecule##AK307059|CD83|9308|CD83 molecule##AK309541|CD83|9308|CD83 molecule##DQ892356|CD83|9308|CD83 molecule##DQ895563|CD83|9308|CD83 molecule##Z11697|CD83|9308|CD83 molecule##BT019498|CD83|9308|CD83 molecule##CR457019|CD83|9308|CD83 molecule##NM_001040280|CD83|9308|CD83 molecule##NM_004233|CD83|9308|CD83 molecule##BC030830|CD83|9308|CD83 molecule##BC004351|CD83|9308|CD83 molecule##NM_001251901|CD83|9308|CD83 molecule##AK302624|JARID2|3720|jumonji, AT rich interactive domain 2##AK292861|JARID2|3720|jumonji, AT rich interactive domain 2##BC046246|JARID2|3720|jumonji, AT rich interactive domain 2##NM_004973|JARID2|3720|jumonji, AT rich interactive domain 2##U57592|JARID2|3720|jumonji, AT rich interactive domain 2	0.0	
chr6	50578446	50578556	reg1041693.p1	3.495	+	DQ012016 NM_001037498	-562138	-	DQ012014 DQ012015 NM_001037497 NM_001037728	-588831	-	DQ012017 NM_001037729	-641164	-	AY028376 NM_172238	102755	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	208034	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	1373894	-	DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##DQ012014|DEFB110|245913|defensin, beta 110 locus##DQ012015|DEFB110|245913|defensin, beta 110 locus##NM_001037497|DEFB110|245913|defensin, beta 110 locus##NM_001037728|DEFB110|245913|defensin, beta 110 locus##DQ012017|DEFB113|245927|defensin, beta 113##NM_001037729|DEFB113|245927|defensin, beta 113##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)	0.95958	CTCF.p2:-48:0.960
chr7	150436240	150436351	reg1034977.p2	3.495	+	TSC_hg19_v1_chr7_+_150434679 BC033688 BC011732	-1605	+	NM_018384 TSC_hg19_v1_chr7_+_150434485 AK002158 AK297881	-1820	+	TSC_hg19_v1_chr7_+_150413697 NM_001199577 NM_130759 BC029442 AK091818 AX747200 AK315127 AJ306287 BC040736	-22623	+	NM_001162367	10528	+	TSC_hg19_v1_chr7_-_150497453 AK315575 AK000841 BC091471 AK129525 NM_001101311 NM_001101312 NM_001101314	61214	-	BC008303 TSC_hg19_v1_chr7_+_150497852 NM_018487 AF258340	61577	+	BC033688|GIMAP5|55340|GTPase, IMAP family member 5##BC011732|GIMAP5|55340|GTPase, IMAP family member 5##NM_018384|GIMAP5|55340|GTPase, IMAP family member 5##AK002158|GIMAP5|55340|GTPase, IMAP family member 5##AK297881|GIMAP5|55340|GTPase, IMAP family member 5##NM_001199577|GIMAP1-GIMAP5|100527949|GIMAP1-GIMAP5 readthrough##NM_130759|GIMAP1|170575|GTPase, IMAP family member 1##AK091818|GIMAP1|170575|GTPase, IMAP family member 1##AK315127|GIMAP1|170575|GTPase, IMAP family member 1##AJ306287|GIMAP1|170575|GTPase, IMAP family member 1##BC040736|GIMAP1|170575|GTPase, IMAP family member 1##NM_001162367|LOC100128542|100128542|uncharacterized LOC100128542##AK315575|TMEM176B|28959|transmembrane protein 176B##AK000841|TMEM176B|28959|transmembrane protein 176B##BC091471|TMEM176B|28959|transmembrane protein 176B##AK129525|TMEM176B|28959|transmembrane protein 176B##NM_001101311|TMEM176B|28959|transmembrane protein 176B##NM_001101312|TMEM176B|28959|transmembrane protein 176B##NM_001101314|TMEM176B|28959|transmembrane protein 176B##BC008303|TMEM176A|55365|transmembrane protein 176A##NM_018487|TMEM176A|55365|transmembrane protein 176A##AF258340|TMEM176A|55365|transmembrane protein 176A	0.0	
chrX	138557682	138557781	reg1041130.p1	3.495	+	TSC_hg19_v1_chrX_-_138287186 AK303685 NM_001139498 NM_001139500 NM_001139501 AK297545	-270534	-	AF199613 TSC_hg19_v1_chrX_-_138287166	-270572	-	AF108756 AK316170 TSC_hg19_v1_chrX_-_138286506	-271261	-	BC109214 BC109215 NM_000133 TSC_hg19_v1_chrX_+_138612919 J00137 AB186358 AK292749 FR846238 FR846239 FR846240 J00136 M11309	55179	+	X12556 AK313900 AK296488 NM_001171877 NM_001171878 NM_001171879 NM_005369	167194	-	AK302957 AK316416 NM_001099855 NM_001171876	232623	-	AK303685|FGF13|2258|fibroblast growth factor 13##NM_001139498|FGF13|2258|fibroblast growth factor 13##NM_001139500|FGF13|2258|fibroblast growth factor 13##NM_001139501|FGF13|2258|fibroblast growth factor 13##AK297545|FGF13|2258|fibroblast growth factor 13##AF199613|FGF13|2258|fibroblast growth factor 13##AF108756|FGF13|2258|fibroblast growth factor 13##AK316170|FGF13|2258|fibroblast growth factor 13##BC109214|F9|2158|coagulation factor IX##BC109215|F9|2158|coagulation factor IX##NM_000133|F9|2158|coagulation factor IX##J00137|F9|2158|coagulation factor IX##AB186358|F9|2158|coagulation factor IX##AK292749|F9|2158|coagulation factor IX##FR846238|F9|2158|coagulation factor IX##FR846239|F9|2158|coagulation factor IX##FR846240|F9|2158|coagulation factor IX##J00136|F9|2158|coagulation factor IX##M11309|F9|2158|coagulation factor IX##X12556|MCF2|4168|MCF.2 cell line derived transforming sequence##AK313900|MCF2|4168|MCF.2 cell line derived transforming sequence##AK296488|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171877|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171878|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171879|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_005369|MCF2|4168|MCF.2 cell line derived transforming sequence##AK302957|MCF2|4168|MCF.2 cell line derived transforming sequence##AK316416|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001099855|MCF2|4168|MCF.2 cell line derived transforming sequence##NM_001171876|MCF2|4168|MCF.2 cell line derived transforming sequence	0.994504	CTCF.p2:17:0.995
chrX	70837140	70837232	reg1042070.p1	3.495	+	NM_052957	-39313	+	TSC_hg19_v1_chrX_+_70765496 AL050366	-71664	+	TSC_hg19_v1_chrX_+_70752953 AK026724 AK300267 BX537844 BC038180 BC014434	-84223	+	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	1146	-	NM_001145139 NM_001145140	100948	-	NM_001145139 NM_001145140	145953	+	NM_052957|ACRC|93953|acidic repeat containing##AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##AK300267|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BX537844|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BC038180|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BC014434|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49	0.0	
chr10	96312396	96312463	reg1041676.p1	3.494	+	TSC_hg19_v1_chr10_+_96305574 AK314485 BX538033 BC068440 AK308331 BC105606 AF155827 NM_018063 BC111789 AB527159 AB102716 AB102717 AB102718 AB102719 AB102720 AB102721 AB102722 AB102723 AB113248 AB113249	-6830	+	TSC_hg19_v1_chr10_+_96162276 AB011180 AB449898	-150108	+	NM_015188 TSC_hg19_v1_chr10_+_96162185	-150243	+	NM_000772 NM_001128925 M61856 BC069666 BC096257 BC096258 BC096259 BC096260 M61853 TSC_hg19_v1_chr10_+_96443551 AK223510 AK313403 CU686960	130984	+	M61854 AB463557 NM_000769	210030	+	TSC_hg19_v1_chr10_+_96698414 AK289420 AK298458 BC020754 NM_000771 BC070317 M61855 M61857 BC125054 D00173 M21939 M15331 S46963	386013	+	AK314485|HELLS|3070|helicase, lymphoid-specific##BX538033|HELLS|3070|helicase, lymphoid-specific##BC068440|HELLS|3070|helicase, lymphoid-specific##AK308331|HELLS|3070|helicase, lymphoid-specific##BC105606|HELLS|3070|helicase, lymphoid-specific##AF155827|HELLS|3070|helicase, lymphoid-specific##NM_018063|HELLS|3070|helicase, lymphoid-specific##BC111789|HELLS|3070|helicase, lymphoid-specific##AB102716|HELLS|3070|helicase, lymphoid-specific##AB102717|HELLS|3070|helicase, lymphoid-specific##AB102718|HELLS|3070|helicase, lymphoid-specific##AB102719|HELLS|3070|helicase, lymphoid-specific##AB102720|HELLS|3070|helicase, lymphoid-specific##AB102721|HELLS|3070|helicase, lymphoid-specific##AB102722|HELLS|3070|helicase, lymphoid-specific##AB102723|HELLS|3070|helicase, lymphoid-specific##AB113248|HELLS|3070|helicase, lymphoid-specific##AB113249|HELLS|3070|helicase, lymphoid-specific##AB011180|TBC1D12|23232|TBC1 domain family, member 12##AB449898|TBC1D12|23232|TBC1 domain family, member 12##NM_015188|TBC1D12|23232|TBC1 domain family, member 12##NM_000772|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##NM_001128925|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##M61856|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC069666|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096257|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096258|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096259|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##BC096260|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##M61853|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##AK223510|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##AK313403|CYP2C18|1562|cytochrome P450, family 2, subfamily C, polypeptide 18##M61854|CYP2C19|1557|cytochrome P450, family 2, subfamily C, polypeptide 19##NM_000769|CYP2C19|1557|cytochrome P450, family 2, subfamily C, polypeptide 19##AK289420|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##AK298458|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC020754|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##NM_000771|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC070317|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61855|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M61857|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##BC125054|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##D00173|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M21939|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##M15331|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9##S46963|CYP2C9|1559|cytochrome P450, family 2, subfamily C, polypeptide 9	0.0	
chr13	100012025	100012183	reg1039440.p1	3.494	+	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	-52406	-	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-101490	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-158985	+	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	141596	+	TSC_hg19_v1_chr13_+_100153777 BC130293	141678	+	BC041830 TSC_hg19_v1_chr13_+_100229390	217273	+	AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.405422	CTCF.p2:28:0.405
chr15	34353944	34354125	reg1004987.p1	3.494	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	-22722	-	AK095198 NM_012125	-92946	+	TSC_hg19_v1_chr15_-_34212524 BC037796	-141476	-	BC012456 TSC_hg19_v1_chr15_-_34394064 AJ250344 NM_020154 AY358445	40007	-	TSC_hg19_v1_chr15_-_34394073 AJ245874 AK314883 BC104934 BC104936	40069	-	AK057200 NM_152595 BC130441	40247	+	BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC012456|C15orf24|56851|chromosome 15 open reading frame 24##AJ250344|C15orf24|56851|chromosome 15 open reading frame 24##NM_020154|C15orf24|56851|chromosome 15 open reading frame 24##AY358445|C15orf24|56851|chromosome 15 open reading frame 24##AJ245874|C15orf24|56851|chromosome 15 open reading frame 24##AK314883|C15orf24|56851|chromosome 15 open reading frame 24##BC104934|C15orf24|56851|chromosome 15 open reading frame 24##BC104936|C15orf24|56851|chromosome 15 open reading frame 24##AK057200|PGBD4|161779|piggyBac transposable element derived 4##NM_152595|PGBD4|161779|piggyBac transposable element derived 4##BC130441|PGBD4|161779|piggyBac transposable element derived 4	0.0	
chr15	52970392	52970566	reg1042372.p2	3.494	+	TSC_hg19_v1_chr15_-_52861344 BC100015 AL833077	-109102	-	TSC_hg19_v1_chr15_-_52861228 AF084555 BC003418 NM_006628	-109247	-	AK123616 TSC_hg19_v1_chr15_-_52861045 AJ223091 CR457132 AK311751	-109420	-	AB037791 AK292917 NM_019600 BC040548 TSC_hg19_v1_chr15_-_52970945 AK308049	402	-	AB463985 BC140830 NM_004498 U96173 TSC_hg19_v1_chr15_-_53082301	111715	-	AK096055 BX537884 NM_182758	1081368	-	BC100015|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AL833077|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AF084555|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##BC003418|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##NM_006628|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK123616|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AJ223091|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##CR457132|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AK311751|ARPP19|10776|cAMP-regulated phosphoprotein, 19kDa##AB037791|FAM214A|56204|family with sequence similarity 214, member A##AK292917|FAM214A|56204|family with sequence similarity 214, member A##NM_019600|FAM214A|56204|family with sequence similarity 214, member A##BC040548|FAM214A|56204|family with sequence similarity 214, member A##AK308049|FAM214A|56204|family with sequence similarity 214, member A##BC140830|ONECUT1|3175|one cut homeobox 1##NM_004498|ONECUT1|3175|one cut homeobox 1##U96173|ONECUT1|3175|one cut homeobox 1##AK096055|WDR72|256764|WD repeat domain 72##BX537884|WDR72|256764|WD repeat domain 72##NM_182758|WDR72|256764|WD repeat domain 72	0.053291	
chr15	73343874	73343958	reg1039443.p1	3.494	+	TSC_hg19_v1_chr15_-_73076118 AK055526 NM_031284	-267793	-	BC044589 TSC_hg19_v1_chr15_-_73076072	-267845	-	TSC_hg19_v1_chr15_-_73076063 BC006112	-267851	-	NM_001172623 NM_001172624 NM_002499 U61262 U72391 BC117161 BC143270 BC143271 BC143279 AB528479	1004	+	TSC_hg19_v1_chr15_-_73661207 AJ132429 DQ854814	317291	-	AJ238850 NM_005477	317688	-	AK055526|ADPGK|83440|ADP-dependent glucokinase##NM_031284|ADPGK|83440|ADP-dependent glucokinase##BC044589|ADPGK|83440|ADP-dependent glucokinase##BC006112|ADPGK|83440|ADP-dependent glucokinase##NM_001172623|NEO1|4756|neogenin 1##NM_001172624|NEO1|4756|neogenin 1##NM_002499|NEO1|4756|neogenin 1##U61262|NEO1|4756|neogenin 1##U72391|NEO1|4756|neogenin 1##BC117161|NEO1|4756|neogenin 1##BC143270|NEO1|4756|neogenin 1##BC143271|NEO1|4756|neogenin 1##BC143279|NEO1|4756|neogenin 1##AJ132429|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##DQ854814|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##AJ238850|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4##NM_005477|HCN4|10021|hyperpolarization activated cyclic nucleotide-gated potassium channel 4	0.0	
chr16	53164158	53164276	reg1018352.p1	3.494	+	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	-31118	+	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	-75336	+	AK299202 NM_001146188	-582504	-	TSC_hg19_v1_chr16_+_53164923 DQ333316	843	+	NM_001207030	240823	-	TSC_hg19_v1_chr16_+_53468350 NM_005611	304135	+	AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_001207030|LOC643802|643802|u3 small nucleolar ribonucleoprotein protein MPP10-like##NM_005611|RBL2|5934|retinoblastoma-like 2 (p130)	0.0	
chr17	77707218	77707304	reg1036226.p2	3.494	+	AY230663 BC041453 NM_178543 AY358622	-2372	+	NM_001082575	-228699	-	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-636231	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	44720	+	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	63646	-	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	105881	-	AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4	0.0	
chr2	136889916	136889983	reg1038264.p2	3.494	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-14273	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-16151	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-146733	-	TSC_hg19_v1_chr2_+_137523114 AK299929	633167	+	NM_001080427	858512	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1831985	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.0	
chr2	178130183	178130363	reg1004939.p5	3.494	+	AK314816 NM_006164	-415	-	S74017 HM446346 AB463936 CU679962 EU446639 EU831991 EU832084 TSC_hg19_v1_chr2_-_178129456 BC011558	-897	-	AK311688 NM_001145412 NM_001145413	-1702	-	TSC_hg19_v1_chr2_-_178257411 BC093095 AL833088 AK126517	127134	-	AK309714 TSC_hg19_v1_chr2_+_178257487 NM_003659	127156	+	TSC_hg19_v1_chr2_+_178257497 AK225439 AK314259 Y09443 BC141820 AY544121 AK296239 AK316240	127356	+	AK314816|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_006164|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##S74017|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##HM446346|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU446639|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU831991|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##EU832084|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##BC011558|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##AK311688|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145412|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##NM_001145413|NFE2L2|4780|nuclear factor (erythroid-derived 2)-like 2##AL833088|LOC100130691|100130691|uncharacterized LOC100130691##AK126517|LOC100130691|100130691|uncharacterized LOC100130691##AK309714|AGPS|8540|alkylglycerone phosphate synthase##NM_003659|AGPS|8540|alkylglycerone phosphate synthase##AK314259|AGPS|8540|alkylglycerone phosphate synthase##Y09443|AGPS|8540|alkylglycerone phosphate synthase##BC141820|AGPS|8540|alkylglycerone phosphate synthase##AY544121|AGPS|8540|alkylglycerone phosphate synthase##AK296239|AGPS|8540|alkylglycerone phosphate synthase##AK316240|AGPS|8540|alkylglycerone phosphate synthase	0.0	
chr2	228272328	228272421	reg1033977.p1	3.494	+	AY358671 BC137256 BC137257 BC035754 TSC_hg19_v1_chr2_-_228244023 AK026453 NM_024795	-28360	-	AF246239 NM_020194	-80147	+	TSC_hg19_v1_chr2_+_228189983 AK026137 BC093024 AF258660	-82330	+	TSC_hg19_v1_chr2_+_228336861 AK097451	64468	+	TSC_hg19_v1_chr2_+_228336877 NM_001135187 NM_001135188 NM_001135189 NM_004504 BC030592 X89478 BC096272 BC096273 BC096274 BC096275 AB527534 CU688928	64632	+	TSC_hg19_v1_chr2_+_228356287 AK295030	83917	+	AY358671|TM4SF20|79853|transmembrane 4 L six family member 20##BC137256|TM4SF20|79853|transmembrane 4 L six family member 20##BC137257|TM4SF20|79853|transmembrane 4 L six family member 20##BC035754|TM4SF20|79853|transmembrane 4 L six family member 20##AK026453|TM4SF20|79853|transmembrane 4 L six family member 20##NM_024795|TM4SF20|79853|transmembrane 4 L six family member 20##AF246239|MFF|56947|mitochondrial fission factor##NM_020194|MFF|56947|mitochondrial fission factor##AK026137|MFF|56947|mitochondrial fission factor##BC093024|MFF|56947|mitochondrial fission factor##AF258660|MFF|56947|mitochondrial fission factor##AK097451|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135187|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135188|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135189|AGFG1|3267|ArfGAP with FG repeats 1##NM_004504|AGFG1|3267|ArfGAP with FG repeats 1##BC030592|AGFG1|3267|ArfGAP with FG repeats 1##X89478|AGFG1|3267|ArfGAP with FG repeats 1##BC096272|AGFG1|3267|ArfGAP with FG repeats 1##BC096273|AGFG1|3267|ArfGAP with FG repeats 1##BC096274|AGFG1|3267|ArfGAP with FG repeats 1##BC096275|AGFG1|3267|ArfGAP with FG repeats 1##AK295030|AGFG1|3267|ArfGAP with FG repeats 1	1.05511	CTCF.p2:-8:0.992
chr22	44844936	44845033	reg1033718.p1	3.494	+	NM_001099294	-136254	-	NM_001137606 TSC_hg19_v1_chr22_+_44577256	-267728	+	AK307299 TSC_hg19_v1_chr22_+_44577227 AK311264	-267760	+	AK126304 TSC_hg19_v1_chr22_-_44893199	48212	-	AB463098 CU013037 CU013325 CR456439 TSC_hg19_v1_chr22_-_44893542	48505	-	TSC_hg19_v1_chr22_-_44893996 BC030232 NM_032287 AK296479	49134	-	NM_001099294|KIAA1644|85352|KIAA1644##NM_001137606|PARVG|64098|parvin, gamma##AK307299|PARVG|64098|parvin, gamma##AK126304|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CU013037|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CU013325|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##CR456439|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##BC030232|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##NM_032287|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like##AK296479|LDOC1L|84247|leucine zipper, down-regulated in cancer 1-like	0.0	
chr2	75062050	75062160	reg1040158.p1	3.494	+	TSC_hg19_v1_chr2_+_75061273 AF148513 BC021116 BC064369 AK290357	-845	+	AF086198 NM_000189	-2324	+	TSC_hg19_v1_chr2_+_74881437 AK095587 AK312728 AL136552 NM_004263 AK075384 AK304358 AK291023 BC018361 BC038411 AK308166 AB021292 AB022317 AB463247 AM393735 CU676238 CU691566 DQ895677	-180677	+	TSC_hg19_v1_chr2_-_75062285 BC013295	146	-	TSC_hg19_v1_chr2_+_75185771 NM_019896 BC031331	123680	+	AK289765 NM_001058 NM_015727	364523	-	AF148513|HK2|3099|hexokinase 2##BC021116|HK2|3099|hexokinase 2##BC064369|HK2|3099|hexokinase 2##AK290357|HK2|3099|hexokinase 2##AF086198|HK2|3099|hexokinase 2##NM_000189|HK2|3099|hexokinase 2##AK312728|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AL136552|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##NM_004263|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK075384|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK304358|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK291023|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC018361|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC038411|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK308166|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AB021292|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AB022317|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AM393735|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##DQ895677|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##NM_019896|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##BC031331|POLE4|56655|polymerase (DNA-directed), epsilon 4 (p12 subunit)##AK289765|TACR1|6869|tachykinin receptor 1##NM_001058|TACR1|6869|tachykinin receptor 1##NM_015727|TACR1|6869|tachykinin receptor 1	0.0	
chr2	85413434	85413528	reg1034981.p1	3.494	+	TSC_hg19_v1_chr2_+_85360536 BC058894 NM_031283 AB031046 AB590638	-52822	+	BC000178 TSC_hg19_v1_chr2_+_85198470 AK314761 AB083199 AF155652 AK023403	-214990	+	TSC_hg19_v1_chr2_+_85198299 NM_020122	-215197	+	TSC_hg19_v1_chr2_-_85555100 CU678967 EU176441 EU176775 X94333 BC028219	141591	-	AK223063 TSC_hg19_v1_chr2_-_85555113 AK126465 AK222829 BX640733 AK312479 BC008461 AF027515 AF027516 U62390	141649	-	TSC_hg19_v1_chr2_-_85555373 BX640868 NM_001206840 NM_001206841 NM_001206844 NM_006464	141907	-	BC058894|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##NM_031283|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##AB031046|TCF7L1|83439|transcription factor 7-like 1 (T-cell specific, HMG-box)##BC000178|KCMF1|56888|potassium channel modulatory factor 1##AK314761|KCMF1|56888|potassium channel modulatory factor 1##AB083199|KCMF1|56888|potassium channel modulatory factor 1##AF155652|KCMF1|56888|potassium channel modulatory factor 1##AK023403|KCMF1|56888|potassium channel modulatory factor 1##NM_020122|KCMF1|56888|potassium channel modulatory factor 1##EU176441|TGOLN2|10618|trans-golgi network protein 2##EU176775|TGOLN2|10618|trans-golgi network protein 2##X94333|TGOLN2|10618|trans-golgi network protein 2##BC028219|TGOLN2|10618|trans-golgi network protein 2##AK223063|TGOLN2|10618|trans-golgi network protein 2##AK126465|TGOLN2|10618|trans-golgi network protein 2##AK222829|TGOLN2|10618|trans-golgi network protein 2##BX640733|TGOLN2|10618|trans-golgi network protein 2##AK312479|TGOLN2|10618|trans-golgi network protein 2##BC008461|TGOLN2|10618|trans-golgi network protein 2##AF027515|TGOLN2|10618|trans-golgi network protein 2##AF027516|TGOLN2|10618|trans-golgi network protein 2##U62390|TGOLN2|10618|trans-golgi network protein 2##BX640868|TGOLN2|10618|trans-golgi network protein 2##NM_001206840|TGOLN2|10618|trans-golgi network protein 2##NM_001206841|TGOLN2|10618|trans-golgi network protein 2##NM_001206844|TGOLN2|10618|trans-golgi network protein 2##NM_006464|TGOLN2|10618|trans-golgi network protein 2	0.457087	CTCF.p2:-4:0.389
chr3	195717549	195717616	reg1041512.p2	3.494	+	TSC_hg19_v1_chr3_-_195717156 BC071730 AK300421 AK316025 AK299148	-451	-	NM_005781 L13738	-81666	-	AK131539 NM_001010938	-95151	-	TSC_hg19_v1_chr3_-_195808954 AB209254 X01060 BC001188	91362	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	91379	-	TSC_hg19_v1_chr3_-_195808984 M11507	91401	-	BC071730|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##AK316025|SDHAP2|727956|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2##AK299148|SDHAP1|255812|succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1##NM_005781|TNK2|10188|tyrosine kinase, non-receptor, 2##L13738|TNK2|10188|tyrosine kinase, non-receptor, 2##AK131539|TNK2|10188|tyrosine kinase, non-receptor, 2##NM_001010938|TNK2|10188|tyrosine kinase, non-receptor, 2##AB209254|TFRC|7037|transferrin receptor (p90, CD71)##X01060|TFRC|7037|transferrin receptor (p90, CD71)##BC001188|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)	0.104883	
chr5	110805708	110805835	reg1037988.p1	3.494	+	L24959 TSC_hg19_v1_chr5_+_110560081 NM_001744 AK311662 AK312840 BC025687 BC016695 D30742 L17000 AB529005 CU677679 DQ892902 DQ893195 DQ893196 DQ896523 DQ896524 DQ896525 DQ896526	-245822	+	AF385437 NM_139281 BC133025 BC136517 AK095312 TSC_hg19_v1_chr5_+_110428045 AL832494	-377812	+	AY037115 NM_033035	-398382	+	AK054566 NM_139164 TSC_hg19_v1_chr5_-_110848234 AK290312 AK310848 BC019632 AK125317 AK308851 AK315863 AK315869	42431	-	BC042956 TSC_hg19_v1_chr5_-_110848300	42523	-	NM_001142483	286176	-	L24959|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##NM_001744|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK311662|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AK312840|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC025687|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##BC016695|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##D30742|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##L17000|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ892902|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893195|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ893196|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896523|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896524|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896525|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##DQ896526|CAMK4|814|calcium/calmodulin-dependent protein kinase IV##AF385437|WDR36|134430|WD repeat domain 36##NM_139281|WDR36|134430|WD repeat domain 36##BC133025|WDR36|134430|WD repeat domain 36##BC136517|WDR36|134430|WD repeat domain 36##AK095312|WDR36|134430|WD repeat domain 36##AL832494|WDR36|134430|WD repeat domain 36##AY037115|TSLP|85480|thymic stromal lymphopoietin##NM_033035|TSLP|85480|thymic stromal lymphopoietin##AK054566|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_139164|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK290312|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK310848|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC019632|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK125317|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK308851|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315863|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##AK315869|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##BC042956|STARD4|134429|StAR-related lipid transfer (START) domain containing 4##NM_001142483|C5orf13|9315|chromosome 5 open reading frame 13	0.0	
chr6	149432774	149432938	reg1031133.p1	3.494	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-364647	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-768665	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-768866	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	206247	+	AK315038 NM_015093 AK307650	206585	+	AY340238 NM_001002255 BC130305 HQ258040	288652	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr7	8165397	8165505	reg1036573.p1	3.494	+	TSC_hg19_v1_chr7_+_8008451 NM_138426 BC050291	-157018	+	BC009868 NM_002947	-407214	-	TSC_hg19_v1_chr7_+_7680382 AK295253	-485078	+	NM_022307 U26591 TSC_hg19_v1_chr7_-_8301746	136265	-	U26592 AK292106 NM_001136020 TSC_hg19_v1_chr7_-_8301805	136340	-	TSC_hg19_v1_chr7_-_8302174 U38260 L01100 BC008640 BC005922 NM_004968	136722	-	NM_138426|GLCCI1|113263|glucocorticoid induced transcript 1##BC050291|GLCCI1|113263|glucocorticoid induced transcript 1##BC009868|RPA3|6119|replication protein A3, 14kDa##NM_002947|RPA3|6119|replication protein A3, 14kDa##AK295253|LOC729852|729852|uncharacterized LOC729852##NM_022307|ICA1|3382|islet cell autoantigen 1, 69kDa##U26591|ICA1|3382|islet cell autoantigen 1, 69kDa##U26592|ICA1|3382|islet cell autoantigen 1, 69kDa##AK292106|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_001136020|ICA1|3382|islet cell autoantigen 1, 69kDa##U38260|ICA1|3382|islet cell autoantigen 1, 69kDa##L01100|ICA1|3382|islet cell autoantigen 1, 69kDa##BC008640|ICA1|3382|islet cell autoantigen 1, 69kDa##BC005922|ICA1|3382|islet cell autoantigen 1, 69kDa##NM_004968|ICA1|3382|islet cell autoantigen 1, 69kDa	0.0	
chr10	11237185	11237365	reg1040379.p1	3.493	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-29783	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-29829	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-29850	+	NM_001080491	336998	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	416361	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	547123	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.0	
chr1	33764143	33764215	reg1006719.p1	3.493	+	TSC_hg19_v1_chr1_+_33722167 NM_152493	-42014	+	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	-116531	-	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	-217446	+	TSC_hg19_v1_chr1_-_33813262 AK055807	49117	-	BC029269 TSC_hg19_v1_chr1_-_33815374 BC068573 BC092492 BC110863	51190	-	AK128821 TSC_hg19_v1_chr1_-_33815496 BC028396 BC018602	51274	-	NM_152493|ZNF362|149076|zinc finger protein 362##AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##BC029269|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC068573|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC092492|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC110863|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AK128821|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC028396|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##BC018602|PHC2|1912|polyhomeotic homolog 2 (Drosophila)	0.0	
chr14	33045593	33045774	reg1003991.p2	3.493	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-247147	+	TSC_hg19_v1_chr14_+_32546509 NM_001030055 NM_001173 U17032 BC129928 BC129929	-499177	+	TSC_hg19_v1_chr14_+_32546223 BC075799	-499438	+	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	362807	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	1374466	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	1885804	-	NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##NM_001030055|ARHGAP5|394|Rho GTPase activating protein 5##NM_001173|ARHGAP5|394|Rho GTPase activating protein 5##U17032|ARHGAP5|394|Rho GTPase activating protein 5##BC129928|ARHGAP5|394|Rho GTPase activating protein 5##BC129929|ARHGAP5|394|Rho GTPase activating protein 5##BC075799|ARHGAP5|394|Rho GTPase activating protein 5##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A	0.0	
chr14	77506765	77506903	reg1036439.p2	3.493	+	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-11774	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	-12150	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-214039	+	AK124327 TSC_hg19_v1_chr14_-_77542533	35699	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	57811	+	BC117676 TSC_hg19_v1_chr14_-_77608072	101181	-	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22	0.0	
chr14	81613708	81613797	reg1037054.p1	3.493	+	AK303378 BC024205 NM_000369 NM_001018036 NM_001142626 M31774 BC108653 BC009237 M73747 M32215 BC063613 AB209207 BC120972 BC120973 BC127628 BC127629 BC141970 S49816 AB384880 AY429111 CU687778 S45272	-191886	+	BC045834 AK309833 TSC_hg19_v1_chr14_-_81408073	-205694	-	NM_152446	-207869	-	D14887 TSC_hg19_v1_chr14_-_81687285 NM_015859 BC050703	73528	-	D14886 NM_201595	73822	-	HQ258668 AF380833 BC117493 BC117495 BC069389 BC069359 BC069502 BC069587 AF449430 NM_033104	251074	-	BC024205|TSHR|7253|thyroid stimulating hormone receptor##NM_000369|TSHR|7253|thyroid stimulating hormone receptor##NM_001018036|TSHR|7253|thyroid stimulating hormone receptor##NM_001142626|TSHR|7253|thyroid stimulating hormone receptor##M31774|TSHR|7253|thyroid stimulating hormone receptor##BC108653|TSHR|7253|thyroid stimulating hormone receptor##BC009237|TSHR|7253|thyroid stimulating hormone receptor##M73747|TSHR|7253|thyroid stimulating hormone receptor##M32215|TSHR|7253|thyroid stimulating hormone receptor##BC063613|TSHR|7253|thyroid stimulating hormone receptor##AB209207|TSHR|7253|thyroid stimulating hormone receptor##BC120972|TSHR|7253|thyroid stimulating hormone receptor##BC120973|TSHR|7253|thyroid stimulating hormone receptor##BC127628|TSHR|7253|thyroid stimulating hormone receptor##BC127629|TSHR|7253|thyroid stimulating hormone receptor##BC141970|TSHR|7253|thyroid stimulating hormone receptor##S49816|TSHR|7253|thyroid stimulating hormone receptor##AY429111|TSHR|7253|thyroid stimulating hormone receptor##S45272|TSHR|7253|thyroid stimulating hormone receptor##BC045834|CEP128|145508|centrosomal protein 128kDa##AK309833|CEP128|145508|centrosomal protein 128kDa##NM_152446|CEP128|145508|centrosomal protein 128kDa##D14887|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_015859|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##BC050703|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##D14886|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##NM_201595|GTF2A1|2957|general transcription factor IIA, 1, 19/37kDa##HQ258668|STON2|85439|stonin 2##AF380833|STON2|85439|stonin 2##BC117493|STON2|85439|stonin 2##BC117495|STON2|85439|stonin 2##BC069389|STON2|85439|stonin 2##BC069359|STON2|85439|stonin 2##BC069502|STON2|85439|stonin 2##BC069587|STON2|85439|stonin 2##AF449430|STON2|85439|stonin 2##NM_033104|STON2|85439|stonin 2	0.0	
chr16	70563456	70563578	reg1038514.p1	3.493	+	TSC_hg19_v1_chr16_+_70557732 D87686 BC068974	-5769	+	BC009780 TSC_hg19_v1_chr16_+_70557724	-5793	+	TSC_hg19_v1_chr16_+_70557713 NM_012426 AK291768	-5817	+	NM_001172771 NM_152456	50280	+	NM_001172772	94377	+	BC002770 TSC_hg19_v1_chr16_-_70713956	150426	-	D87686|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##BC068974|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##BC009780|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##NM_012426|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##AK291768|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##NM_001172771|IL34|146433|interleukin 34##NM_152456|IL34|146433|interleukin 34##NM_001172772|IL34|146433|interleukin 34##BC002770|MTSS1L|92154|metastasis suppressor 1-like	0.988846	CTCF.p2:-22:0.989
chr19	45596244	45596411	reg1027608.p2	3.493	+	TSC_hg19_v1_chr19_+_45596205 BC035704	-112	+	TSC_hg19_v1_chr19_+_45582529 NM_001007270 NM_001007269 NM_024707 AK024018 BC007793	-13814	+	BC019352 NM_145288	-16640	-	TSC_hg19_v1_chr19_+_45596436 NM_019121	95	+	NM_198478	67080	-	TSC_hg19_v1_chr19_-_45681496 FJ418644 BC001907 NM_024108 BC004450 AF161407	85151	-	BC035704|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##NM_001007270|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_001007269|GEMIN7|79760|gem (nuclear organelle) associated protein 7##NM_024707|GEMIN7|79760|gem (nuclear organelle) associated protein 7##AK024018|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC007793|GEMIN7|79760|gem (nuclear organelle) associated protein 7##BC019352|ZNF296|162979|zinc finger protein 296##NM_145288|ZNF296|162979|zinc finger protein 296##NM_019121|PPP1R37|284352|protein phosphatase 1, regulatory subunit 37##NM_198478|NKPD1|284353|NTPase, KAP family P-loop domain containing 1##FJ418644|TRAPPC6A|79090|trafficking protein particle complex 6A##BC001907|TRAPPC6A|79090|trafficking protein particle complex 6A##NM_024108|TRAPPC6A|79090|trafficking protein particle complex 6A##BC004450|TRAPPC6A|79090|trafficking protein particle complex 6A##AF161407|TRAPPC6A|79090|trafficking protein particle complex 6A	0.0	
chr20	61480960	61481039	reg1041758.p1	3.493	+	NM_080750	-4524	+	TSC_hg19_v1_chr20_+_61448401 BC011705 NM_001853 DQ892946 DQ896194 L41162	-32596	+	TSC_hg19_v1_chr20_+_61436186 NM_007346 AK314696 AK022234 AF109134 BC008768 BC014137 CU680798 DQ892943 EU176723 BC032666	-44806	+	AF070992 AB012124 BC065520 BC046933 NM_006602 TSC_hg19_v1_chr20_-_61493138	12057	-	TSC_hg19_v1_chr20_-_61557824 BC014615 BC014489	76822	-	TSC_hg19_v1_chr20_-_61557842 AY481571 AY481572	76857	-	NM_080750|DPH3P1|100132911|DPH3, KTI11 homolog (S. cerevisiae) pseudogene 1##BC011705|COL9A3|1299|collagen, type IX, alpha 3##NM_001853|COL9A3|1299|collagen, type IX, alpha 3##DQ892946|COL9A3|1299|collagen, type IX, alpha 3##DQ896194|COL9A3|1299|collagen, type IX, alpha 3##L41162|COL9A3|1299|collagen, type IX, alpha 3##NM_007346|OGFR|11054|opioid growth factor receptor##AK314696|OGFR|11054|opioid growth factor receptor##AK022234|OGFR|11054|opioid growth factor receptor##AF109134|OGFR|11054|opioid growth factor receptor##BC008768|OGFR|11054|opioid growth factor receptor##BC014137|OGFR|11054|opioid growth factor receptor##DQ892943|OGFR|11054|opioid growth factor receptor##EU176723|OGFR|11054|opioid growth factor receptor##BC032666|OGFR|11054|opioid growth factor receptor##AF070992|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##AB012124|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC065520|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC046933|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##NM_006602|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC014615|DIDO1|11083|death inducer-obliterator 1##BC014489|DIDO1|11083|death inducer-obliterator 1##AY481571|DIDO1|11083|death inducer-obliterator 1##AY481572|DIDO1|11083|death inducer-obliterator 1	0.0	
chr2	237548462	237548551	reg1043675.p1	3.493	+	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	-70078	+	BC043504 NM_024726 AK294105 BC028699	-132374	-	NM_212556 BX647589	-375512	-	BC036499 NM_006710 NM_198189	445512	+	TSC_hg19_v1_chr2_-_237994424 AK056246	445931	-	TSC_hg19_v1_chr2_+_237994528 AK294078 AK313437	446014	+	NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037##AK294078|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK313437|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)	0.0	
chr2	54569406	54569472	reg1029921.p2	3.493	+	AK097617 NM_001100396 BC126244 BC126246 BC144191 BC144192 BC031669	-11351	+	BC068576 AK097417 NM_001003937	-86064	-	NM_138448 AK307096 BC012290 X84195 TSC_hg19_v1_chr2_+_54342769	-226845	+	TSC_hg19_v1_chr2_+_54683463 NM_003128 AB371586 AB209748	114173	+	TSC_hg19_v1_chr2_+_54684338 BC032061	114928	+	TSC_hg19_v1_chr2_+_54785519 AF327441 NM_178313 BC137282 BC137283	216126	+	AK097617|C2orf73|129852|chromosome 2 open reading frame 73##NM_001100396|C2orf73|129852|chromosome 2 open reading frame 73##BC126244|C2orf73|129852|chromosome 2 open reading frame 73##BC126246|C2orf73|129852|chromosome 2 open reading frame 73##BC144191|C2orf73|129852|chromosome 2 open reading frame 73##BC144192|C2orf73|129852|chromosome 2 open reading frame 73##BC031669|C2orf73|129852|chromosome 2 open reading frame 73##BC068576|TSPYL6|388951|TSPY-like 6##AK097417|TSPYL6|388951|TSPY-like 6##NM_001003937|TSPYL6|388951|TSPY-like 6##NM_138448|ACYP2|98|acylphosphatase 2, muscle type##AK307096|ACYP2|98|acylphosphatase 2, muscle type##BC012290|ACYP2|98|acylphosphatase 2, muscle type##X84195|ACYP2|98|acylphosphatase 2, muscle type##NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC032061|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AF327441|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##NM_178313|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137282|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##BC137283|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	0.0	
chr4	10675554	10675656	reg1040572.p1	3.493	+	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-216595	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-557069	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-557127	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	10796	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	754927	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2810346	-	BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr4	152688003	152688098	reg1041494.p2	3.493	+	TSC_hg19_v1_chr4_-_152682144 AB019410 AK303461 AK222887 AK225241 AK312957 AF151033 AF026851 BC067838 BC130348 BC136547 NM_004564	-5909	-	TSC_hg19_v1_chr4_+_152330327 NM_001109977	-357689	+	BC121109 BC121110 NM_183375	-489726	+	AF383178 AK001933 BC037320 AB209725 AB527140 TSC_hg19_v1_chr4_-_153273893 AK315142 BC059373 AK223449 AK299722 AF411972 AY033553 NM_018315	585846	-	NM_001013415 AY008274	615614	-	BC117244 BC117246 BC143944 NM_033632 CR749305 BC014503 HQ873864 HQ873865 HQ873866 HQ873867 HQ873868 HQ873869 HQ873870 TSC_hg19_v1_chr4_-_153456430	768244	-	AB019410|PET112|5188|PET112 homolog (yeast)##AK303461|PET112|5188|PET112 homolog (yeast)##AK222887|PET112|5188|PET112 homolog (yeast)##AK225241|PET112|5188|PET112 homolog (yeast)##AK312957|PET112|5188|PET112 homolog (yeast)##AF151033|PET112|5188|PET112 homolog (yeast)##AF026851|PET112|5188|PET112 homolog (yeast)##BC067838|PET112|5188|PET112 homolog (yeast)##BC130348|PET112|5188|PET112 homolog (yeast)##BC136547|PET112|5188|PET112 homolog (yeast)##NM_004564|PET112|5188|PET112 homolog (yeast)##NM_001109977|FAM160A1|729830|family with sequence similarity 160, member A1##BC121109|PRSS48|345062|protease, serine, 48##BC121110|PRSS48|345062|protease, serine, 48##NM_183375|PRSS48|345062|protease, serine, 48##AF383178|FBXW7|55294|F-box and WD repeat domain containing 7##AK001933|FBXW7|55294|F-box and WD repeat domain containing 7##BC037320|FBXW7|55294|F-box and WD repeat domain containing 7##AB209725|FBXW7|55294|F-box and WD repeat domain containing 7##AK315142|FBXW7|55294|F-box and WD repeat domain containing 7##BC059373|FBXW7|55294|F-box and WD repeat domain containing 7##AK223449|FBXW7|55294|F-box and WD repeat domain containing 7##AK299722|FBXW7|55294|F-box and WD repeat domain containing 7##AF411972|FBXW7|55294|F-box and WD repeat domain containing 7##AY033553|FBXW7|55294|F-box and WD repeat domain containing 7##NM_018315|FBXW7|55294|F-box and WD repeat domain containing 7##NM_001013415|FBXW7|55294|F-box and WD repeat domain containing 7##AY008274|FBXW7|55294|F-box and WD repeat domain containing 7##BC117244|FBXW7|55294|F-box and WD repeat domain containing 7##BC117246|FBXW7|55294|F-box and WD repeat domain containing 7##BC143944|FBXW7|55294|F-box and WD repeat domain containing 7##NM_033632|FBXW7|55294|F-box and WD repeat domain containing 7##CR749305|FBXW7|55294|F-box and WD repeat domain containing 7	0.056042	
chr5	45936279	45936394	reg1037829.p2	3.493	+	AF488549 NM_021072	-240117	-	AF064876 TSC_hg19_v1_chr5_-_45695947	-240445	-	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	-1127309	+	AK300860 TSC_hg19_v1_chr5_-_49737200 BC059398	3800863	-	TSC_hg19_v1_chr5_-_49737229 NM_198449	3800907	-	AK298680 AK314466 BC105789 NM_001178055	4025396	+	AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AK300860|EMB|133418|embigin##BC059398|EMB|133418|embigin##NM_198449|EMB|133418|embigin##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	0.0	
chr7	148701642	148701736	reg1033727.p1	3.493	+	TSC_hg19_v1_chr7_-_148581422 AK303637 NM_001203247 NM_001203248 NM_004456 NM_152998	-120263	-	TSC_hg19_v1_chr7_-_148581380 AK314291	-120308	-	TSC_hg19_v1_chr7_-_148581377 AK293239 AK303585	-120312	-	CU674214 DQ893573 DQ894347 TSC_hg19_v1_chr7_-_148725561 BC000425 BC001928 J05016 AK290971	23866	-	BC006344 BC011754 AK313299 TSC_hg19_v1_chr7_-_148725753	24054	-	TSC_hg19_v1_chr7_-_148725766 NM_004911	24083	-	AK303637|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_001203247|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_001203248|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_004456|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##NM_152998|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK314291|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK293239|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##AK303585|EZH2|2146|enhancer of zeste homolog 2 (Drosophila)##DQ893573|PDIA4|9601|protein disulfide isomerase family A, member 4##DQ894347|PDIA4|9601|protein disulfide isomerase family A, member 4##BC000425|PDIA4|9601|protein disulfide isomerase family A, member 4##BC001928|PDIA4|9601|protein disulfide isomerase family A, member 4##AK290971|PDIA4|9601|protein disulfide isomerase family A, member 4##BC006344|PDIA4|9601|protein disulfide isomerase family A, member 4##BC011754|PDIA4|9601|protein disulfide isomerase family A, member 4##AK313299|PDIA4|9601|protein disulfide isomerase family A, member 4##NM_004911|PDIA4|9601|protein disulfide isomerase family A, member 4	0.0	
chr11	19354102	19354201	reg1038133.p1	3.492	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-90950	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-91676	-	U20324 U72899 U49837 BC057221 NM_001127656 TSC_hg19_v1_chr11_-_19223531 AK313289 NM_003476 AF121260	-130593	-	AB063115 NM_001111018 AJ488205	18164	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	380715	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	690237	+	AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##U20324|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U72899|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##U49837|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##BC057221|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_001127656|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AK313289|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##NM_003476|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AF121260|CSRP3|8048|cysteine and glycine-rich protein 3 (cardiac LIM protein)##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2	0.0	
chr12	32213515	32213590	reg1005533.p1	3.492	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	-101158	+	TSC_hg19_v1_chr12_+_32112348 NM_018169	-101221	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	-268348	-	TSC_hg19_v1_chr12_+_32259750 BC010091	46162	+	AK313430 AK290188 NM_001003398 NM_001714 U90028 BC136372 TSC_hg19_v1_chr12_+_32260263	46621	+	BC039708 BC063403 NM_139241 BC096746 AK057294 BC045552	441487	+	AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##BC010091|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK313430|BICD1|636|bicaudal D homolog 1 (Drosophila)##AK290188|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001003398|BICD1|636|bicaudal D homolog 1 (Drosophila)##NM_001714|BICD1|636|bicaudal D homolog 1 (Drosophila)##U90028|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC136372|BICD1|636|bicaudal D homolog 1 (Drosophila)##BC039708|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC063403|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##NM_139241|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC096746|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##AK057294|FGD4|121512|FYVE, RhoGEF and PH domain containing 4##BC045552|FGD4|121512|FYVE, RhoGEF and PH domain containing 4	0.0	
chr12	94544385	94544459	reg1030116.p1	3.492	+	TSC_hg19_v1_chr12_+_94542476 AF030339 NM_005761 BC029934 AB527325	-1918	+	NM_003805 AK296225 AK294986 AK314861 U79115 BC017042 U84388	-473239	+	BC040677 AK054607 AK098304 TSC_hg19_v1_chr12_-_93965675	-578821	-	BC125086 BC125087 AF155115 TSC_hg19_v1_chr12_-_94853610	309109	-	TSC_hg19_v1_chr12_-_94853612 BC011009 AK056316	309220	-	TSC_hg19_v1_chr12_-_94853765 BC053614 BC032943 NM_001042399 NM_016122	309310	-	AF030339|PLXNC1|10154|plexin C1##NM_005761|PLXNC1|10154|plexin C1##BC029934|PLXNC1|10154|plexin C1##NM_003805|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK296225|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK314861|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U79115|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##BC017042|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##U84388|CRADD|8738|CASP2 and RIPK1 domain containing adaptor with death domain##AK054607|LOC144481|144481|uncharacterized LOC144481##BC125086|CCDC41|51134|coiled-coil domain containing 41##BC125087|CCDC41|51134|coiled-coil domain containing 41##AF155115|CCDC41|51134|coiled-coil domain containing 41##BC011009|CCDC41|51134|coiled-coil domain containing 41##AK056316|CCDC41|51134|coiled-coil domain containing 41##BC053614|CCDC41|51134|coiled-coil domain containing 41##BC032943|CCDC41|51134|coiled-coil domain containing 41##NM_001042399|CCDC41|51134|coiled-coil domain containing 41##NM_016122|CCDC41|51134|coiled-coil domain containing 41	0.474543	CTCF.p2:-98:0.475
chr15	31630907	31631088	reg1033748.p1	3.492	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-11659	+	NM_001243538	-107948	-	GQ502181 HM135791 NM_001252020	-177569	-	AJ430383 NM_130901	316544	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	531832	-	TSC_hg19_v1_chr15_-_32162898 AK126002	531946	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.036613	
chr18	33389800	33389904	reg1032650.p2	3.492	+	NM_020474 BC047746 U41514 AB529022 X85018	-155273	+	AK095502 AK300660 BC039404 NM_001098817 NM_194281	-311927	-	BC130288 BC136314 AF492004 AF533251 AK055775 NM_145756	-432559	-	NM_001201474 NM_001201475 NM_001201476 NM_031446 BC108730 TSC_hg19_v1_chr18_+_33552656 BC119765 BC119766 AK311536 AF277182 AF277189 BC025950	162815	+	TSC_hg19_v1_chr18_-_33647515 DQ892910 EU176720 AF419845 NM_018170 BC000225 AK314569	257575	-	BC010136 TSC_hg19_v1_chr18_-_33647520	257667	-	NM_020474|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##BC047746|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##U41514|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##X85018|GALNT1|2589|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)##AK095502|INO80C|125476|INO80 complex subunit C##AK300660|INO80C|125476|INO80 complex subunit C##BC039404|INO80C|125476|INO80 complex subunit C##NM_001098817|INO80C|125476|INO80 complex subunit C##NM_194281|INO80C|125476|INO80 complex subunit C##BC130288|ZNF396|252884|zinc finger protein 396##BC136314|ZNF396|252884|zinc finger protein 396##AF492004|ZNF396|252884|zinc finger protein 396##AF533251|ZNF396|252884|zinc finger protein 396##AK055775|ZNF396|252884|zinc finger protein 396##NM_145756|ZNF396|252884|zinc finger protein 396##NM_001201474|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201475|C18orf21|83608|chromosome 18 open reading frame 21##NM_001201476|C18orf21|83608|chromosome 18 open reading frame 21##NM_031446|C18orf21|83608|chromosome 18 open reading frame 21##BC108730|C18orf21|83608|chromosome 18 open reading frame 21##BC119765|C18orf21|83608|chromosome 18 open reading frame 21##BC119766|C18orf21|83608|chromosome 18 open reading frame 21##AF277182|C18orf21|83608|chromosome 18 open reading frame 21##AF277189|C18orf21|83608|chromosome 18 open reading frame 21##BC025950|C18orf21|83608|chromosome 18 open reading frame 21##DQ892910|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##EU176720|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AF419845|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##NM_018170|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC000225|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##AK314569|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A##BC010136|RPRD1A|55197|regulation of nuclear pre-mRNA domain containing 1A	0.0	
chr21	28088385	28088466	reg1030873.p2	3.492	+	AY061853 AF401639 AK223576 AK313231 BC036761 AL833200 NM_052954 AK054581 AK304124	-142991	-	AK296229 NM_001136131	-544980	-	TSC_hg19_v1_chr21_-_27543138 NM_000484 NM_001136129 NM_001136130 NM_001204301 NM_001204302 NM_001204303 NM_201413 NM_201414	-545289	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	129046	-	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	129287	-	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	251014	-	AY061853|CYYR1|116159|cysteine/tyrosine-rich 1##AF401639|CYYR1|116159|cysteine/tyrosine-rich 1##AK223576|CYYR1|116159|cysteine/tyrosine-rich 1##AK313231|CYYR1|116159|cysteine/tyrosine-rich 1##BC036761|CYYR1|116159|cysteine/tyrosine-rich 1##AL833200|CYYR1|116159|cysteine/tyrosine-rich 1##NM_052954|CYYR1|116159|cysteine/tyrosine-rich 1##AK054581|CYYR1|116159|cysteine/tyrosine-rich 1##AK304124|CYYR1|116159|cysteine/tyrosine-rich 1##AK296229|APP|351|amyloid beta (A4) precursor protein##NM_001136131|APP|351|amyloid beta (A4) precursor protein##NM_000484|APP|351|amyloid beta (A4) precursor protein##NM_001136129|APP|351|amyloid beta (A4) precursor protein##NM_001136130|APP|351|amyloid beta (A4) precursor protein##NM_001204301|APP|351|amyloid beta (A4) precursor protein##NM_001204302|APP|351|amyloid beta (A4) precursor protein##NM_001204303|APP|351|amyloid beta (A4) precursor protein##NM_201413|APP|351|amyloid beta (A4) precursor protein##NM_201414|APP|351|amyloid beta (A4) precursor protein##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5	0.993568	CTCF.p2:-27:0.994
chr3	133003205	133003349	reg1039722.p1	3.492	+	TSC_hg19_v1_chr3_+_132757234 AY358381 BC000568	-246043	+	NM_001136469 NM_023943 TSC_hg19_v1_chr3_+_132757202	-246090	+	AB082531 NM_153240 TSC_hg19_v1_chr3_-_132441315	-561969	-	NM_003571 BC113518 BC113520 HQ258421 U48224	115581	+	TSC_hg19_v1_chr3_+_133292443 NM_001134422 NM_017548	289199	+	TSC_hg19_v1_chr3_+_133292588 AF103803	289295	+	AY358381|TMEM108|66000|transmembrane protein 108##BC000568|TMEM108|66000|transmembrane protein 108##NM_001136469|TMEM108|66000|transmembrane protein 108##NM_023943|TMEM108|66000|transmembrane protein 108##AB082531|NPHP3-ACAD11|100532724|NPHP3-ACAD11 readthrough##NM_153240|NPHP3|27031|nephronophthisis 3 (adolescent)##NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin##HQ258421|BFSP2|8419|beaded filament structural protein 2, phakinin##U48224|BFSP2|8419|beaded filament structural protein 2, phakinin##NM_001134422|CDV3|55573|CDV3 homolog (mouse)##NM_017548|CDV3|55573|CDV3 homolog (mouse)##AF103803|CDV3|55573|CDV3 homolog (mouse)	0.0	
chr7	17680502	17680598	reg1037143.p1	3.492	+	TSC_hg19_v1_chr7_+_17382906 BC021696	-297644	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	-342281	+	AY359065 BC058284 NM_176813	-758946	-	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	299499	-	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	299577	-	BC062797 BC005309 M57423 NM_175886	386915	-	BC021696|AHR|196|aryl hydrocarbon receptor##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13##AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1	0.0	
chr7	81314342	81314456	reg1032499.p1	3.492	+	AB000220 NM_006379 TSC_hg19_v1_chr7_-_80548678	-765725	-	TSC_hg19_v1_chr7_-_80548503 AK312478 BC030690 AK299322	-765965	-	HM217020 HM217021 HM217022 HM217023 HM217024 HM217025 HM217026 AB590184 CU678951 DQ893062 DQ896314 TSC_hg19_v1_chr7_+_80276126	-1038352	+	FJ830861 FJ830862 M55379 CU687746 CU692548 AB384770 HQ258511 U46010 L02931 M73239 M73240 M60718 BC130284 BC130286 M77227 BC022308 AK313694 X57574 TSC_hg19_v1_chr7_-_81399364 BC063485 M29145 AB208900 X16323 AK291674 BC105797 NM_000601 NM_001010931 NM_001010932 NM_001010933 NM_001010934	84975	-	M76559 BC117468 BC117470 TSC_hg19_v1_chr7_-_82072886	758447	-	TSC_hg19_v1_chr7_-_82073091 NM_000722 BC051339	758681	-	AB000220|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##NM_006379|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK312478|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##BC030690|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##AK299322|SEMA3C|10512|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C##HM217020|CD36|948|CD36 molecule (thrombospondin receptor)##HM217021|CD36|948|CD36 molecule (thrombospondin receptor)##HM217022|CD36|948|CD36 molecule (thrombospondin receptor)##HM217023|CD36|948|CD36 molecule (thrombospondin receptor)##HM217024|CD36|948|CD36 molecule (thrombospondin receptor)##HM217025|CD36|948|CD36 molecule (thrombospondin receptor)##HM217026|CD36|948|CD36 molecule (thrombospondin receptor)##DQ893062|CD36|948|CD36 molecule (thrombospondin receptor)##DQ896314|CD36|948|CD36 molecule (thrombospondin receptor)##FJ830861|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##FJ830862|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M55379|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##HQ258511|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##U46010|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##L02931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73239|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M73240|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M60718|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130284|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC130286|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M77227|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC022308|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK313694|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X57574|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC063485|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M29145|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AB208900|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##X16323|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##AK291674|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##BC105797|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_000601|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010931|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010932|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010933|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##NM_001010934|HGF|3082|hepatocyte growth factor (hepapoietin A; scatter factor)##M76559|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117468|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC117470|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##NM_000722|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1##BC051339|CACNA2D1|781|calcium channel, voltage-dependent, alpha 2/delta subunit 1	0.0	
chr9	132373148	132373328	reg1002968.p3	3.492	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	-121797	+	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	-121884	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	-289943	+	BC112353 AK093122 AX747938 NM_199350	9799	-	TSC_hg19_v1_chr9_+_132388441 NM_014064 AK290957 AK292332 AK298840 AK307056 AK313829	15187	+	TSC_hg19_v1_chr9_+_132388461 BC001396 BC033234 AF110776	15232	+	BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##BC112353|C9orf50|375759|chromosome 9 open reading frame 50##AK093122|C9orf50|375759|chromosome 9 open reading frame 50##NM_199350|C9orf50|375759|chromosome 9 open reading frame 50##NM_014064|METTL11A|28989|methyltransferase like 11A##AK290957|METTL11A|28989|methyltransferase like 11A##AK292332|METTL11A|28989|methyltransferase like 11A##AK298840|METTL11A|28989|methyltransferase like 11A##AK307056|METTL11A|28989|methyltransferase like 11A##AK313829|METTL11A|28989|methyltransferase like 11A##BC001396|METTL11A|28989|methyltransferase like 11A##BC033234|METTL11A|28989|methyltransferase like 11A##AF110776|METTL11A|28989|methyltransferase like 11A	0.0	
chr11	50649531	50649632	reg1038176.p1	3.491	+	BC136850 BC136851 NM_001005270	-645511	-	BC137005 NM_001001955	-675639	+	TSC_hg19_v1_chr11_-_49230053 DQ088979 AF176574 BC025672 AK312366 AK295368 AK295470 AK300532 M99487 NM_001014986 NM_001193471 NM_001193472 NM_001193473 NM_004476 S76978	-1419474	-	BC140750 NM_001005272	762866	-	NM_001004703	865700	+	AF521869 BC001862 NM_024114	4380076	+	BC136850|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC136851|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##NM_001005270|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC137005|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13##NM_001001955|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13##DQ088979|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AF176574|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##BC025672|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK312366|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK295368|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK295470|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK300532|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##M99487|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001014986|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193471|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193472|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193473|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_004476|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##S76978|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##BC140750|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##NM_001005272|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##NM_001004703|OR4C46|119749|olfactory receptor, family 4, subfamily C, member 46##AF521869|TRIM48|79097|tripartite motif containing 48##BC001862|TRIM48|79097|tripartite motif containing 48##NM_024114|TRIM48|79097|tripartite motif containing 48	0.0	
chr1	169075451	169075631	reg1046510.p1	3.491	+	DQ892055 DQ895249 Z22865 BC021212 BC033736 AK292596 TSC_hg19_v1_chr1_-_168698441 NM_001937	-377112	-	NM_002995 BC070309 X86474 D43768 BC069817 U23772 CU687088	-529749	+	BC069360 CU686769 AB590623 U23772 BC070308 NM_003175	-562324	-	TSC_hg19_v1_chr1_+_169075932 AK290181 NM_001677 BC000006 U16799 AB463423 AY545986 BT009787 CR407616	428	+	TSC_hg19_v1_chr1_-_169337033 AB209049 BC006983 AK290701 AF153191 AK094513 AK301917 NM_013330 NM_197972	261551	-	NM_003666 AF288161 U79751 AK223533	261682	+	DQ892055|DPT|1805|dermatopontin##DQ895249|DPT|1805|dermatopontin##Z22865|DPT|1805|dermatopontin##BC033736|DPT|1805|dermatopontin##NM_001937|DPT|1805|dermatopontin##NM_002995|XCL1|6375|chemokine (C motif) ligand 1##BC070309|XCL1|6375|chemokine (C motif) ligand 1##X86474|XCL1|6375|chemokine (C motif) ligand 1##D43768|XCL1|6375|chemokine (C motif) ligand 1##BC069817|XCL1|6375|chemokine (C motif) ligand 1##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC069360|XCL2|6846|chemokine (C motif) ligand 2##U23772|XCL1|6375|chemokine (C motif) ligand 1##BC070308|XCL2|6846|chemokine (C motif) ligand 2##NM_003175|XCL2|6846|chemokine (C motif) ligand 2##AK290181|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##NM_001677|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BC000006|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##U16799|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AY545986|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##BT009787|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##CR407616|ATP1B1|481|ATPase, Na+/K+ transporting, beta 1 polypeptide##AB209049|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##BC006983|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK290701|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AF153191|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK094513|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##AK301917|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_013330|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_197972|NME7|29922|non-metastatic cells 7, protein expressed in (nucleoside-diphosphate kinase)##NM_003666|BLZF1|8548|basic leucine zipper nuclear factor 1##AF288161|BLZF1|8548|basic leucine zipper nuclear factor 1##U79751|BLZF1|8548|basic leucine zipper nuclear factor 1##AK223533|BLZF1|8548|basic leucine zipper nuclear factor 1	0.941872	CTCF.p2:-39:0.918
chr11	82838209	82838332	reg1036256.p1	3.491	+	BC031316 TSC_hg19_v1_chr11_+_82783118	-55152	+	BC014213 NM_014488 TSC_hg19_v1_chr11_-_82782897 BX641138	-55373	-	AK312323 TSC_hg19_v1_chr11_-_82782872	-55397	-	NM_015885 TSC_hg19_v1_chr11_+_82868196 AK302606 AF046935 AK025103 AB020631 BC146778 BC110432 BC065384	30135	+	AK311356 TSC_hg19_v1_chr11_-_82904700	66432	-	TSC_hg19_v1_chr11_+_82904780 DQ508934 BC045621 AK310765 EF041819	66564	+	BC031316|LOC100506233|100506233|uncharacterized LOC100506233##BC014213|RAB30|27314|RAB30, member RAS oncogene family##NM_014488|RAB30|27314|RAB30, member RAS oncogene family##BX641138|RAB30|27314|RAB30, member RAS oncogene family##AK312323|RAB30|27314|RAB30, member RAS oncogene family##NM_015885|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK302606|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AF046935|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK025103|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AB020631|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC146778|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC110432|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC065384|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK311356|DKFZp547G183|55525|uncharacterized LOC55525##DQ508934|ANKRD42|338699|ankyrin repeat domain 42##BC045621|ANKRD42|338699|ankyrin repeat domain 42##AK310765|ANKRD42|338699|ankyrin repeat domain 42##EF041819|ANKRD42|338699|ankyrin repeat domain 42	0.018974	
chr1	233088792	233088889	reg1040593.p1	3.491	+	TSC_hg19_v1_chr1_+_233086381 AF416713	-2451	+	AK311229 AK316591 TSC_hg19_v1_chr1_+_233086356 BC005102 NM_032324	-2496	+	AK290216 TSC_hg19_v1_chr1_+_232941173 BC036663 AB037804	-147689	+	NM_014801 TSC_hg19_v1_chr1_-_233431485 AK092353 AX747494	342643	-	AJ311797 AJ311798 NM_032435 BC136648 BC136649	374743	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	660983	+	AF416713|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK311229|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK316591|NTPCR|84284|nucleoside-triphosphatase, cancer-related##BC005102|NTPCR|84284|nucleoside-triphosphatase, cancer-related##NM_032324|NTPCR|84284|nucleoside-triphosphatase, cancer-related##AK290216|KIAA1383|54627|KIAA1383##BC036663|KIAA1383|54627|KIAA1383##AB037804|KIAA1383|54627|KIAA1383##NM_014801|PCNXL2|80003|pecanex-like 2 (Drosophila)##AK092353|PCNXL2|80003|pecanex-like 2 (Drosophila)##AJ311797|KIAA1804|84451|mixed lineage kinase 4##AJ311798|KIAA1804|84451|mixed lineage kinase 4##NM_032435|KIAA1804|84451|mixed lineage kinase 4##BC136648|KIAA1804|84451|mixed lineage kinase 4##BC136649|KIAA1804|84451|mixed lineage kinase 4##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1	0.0	
chr15	93532846	93532958	reg1038624.p1	3.491	+	AK295909 TSC_hg19_v1_chr15_+_93447798	-85142	+	TSC_hg19_v1_chr15_+_93443573 BC007347 BC020810	-89322	+	AF006514 TSC_hg19_v1_chr15_+_93443553 NM_001042572 NM_001271 AK292850 BC107885	-89416	+	AL390083 TSC_hg19_v1_chr15_-_93616347	83426	-	TSC_hg19_v1_chr15_-_93616364 AK074966 BC015886 NM_001166286	83471	-	AK309814 AK125204 NM_001166288 NM_001166289	84012	-	AK295909|CHD2|1106|chromodomain helicase DNA binding protein 2##BC007347|CHD2|1106|chromodomain helicase DNA binding protein 2##BC020810|CHD2|1106|chromodomain helicase DNA binding protein 2##AF006514|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001042572|CHD2|1106|chromodomain helicase DNA binding protein 2##NM_001271|CHD2|1106|chromodomain helicase DNA binding protein 2##AK292850|CHD2|1106|chromodomain helicase DNA binding protein 2##BC107885|CHD2|1106|chromodomain helicase DNA binding protein 2##AL390083|RGMA|56963|RGM domain family, member A##AK074966|RGMA|56963|RGM domain family, member A##BC015886|RGMA|56963|RGM domain family, member A##NM_001166286|RGMA|56963|RGM domain family, member A##AK309814|RGMA|56963|RGM domain family, member A##AK125204|RGMA|56963|RGM domain family, member A##NM_001166288|RGMA|56963|RGM domain family, member A##NM_001166289|RGMA|56963|RGM domain family, member A	0.0	
chr16	85350149	85350254	reg1035191.p1	3.491	+	BC093665 BC111944 AK126284 NM_198491	-204147	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-288831	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-305072	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	294820	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	296752	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	372341	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	1.039795	CTCF.p2:2:1.000
chr19	14779103	14779209	reg1039151.p1	3.491	+	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	-85242	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	-96307	-	TSC_hg19_v1_chr19_+_14640435 AK001416 AK315412 BC007801 BC013881 BC005952 AF038958 BC002425 BC034484 AF222742 AX771269 AF038959 AB529027 DQ891949 DQ895135 EU832830 GQ129437	-138697	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	6521	-	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	21608	+	BC082991 AF114491 AK301458 AK222891 AK298700 TSC_hg19_v1_chr19_-_14887654	108482	-	NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AK001416|TECR|9524|trans-2,3-enoyl-CoA reductase##AK315412|TECR|9524|trans-2,3-enoyl-CoA reductase##BC007801|TECR|9524|trans-2,3-enoyl-CoA reductase##BC013881|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005952|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038958|TECR|9524|trans-2,3-enoyl-CoA reductase##BC002425|TECR|9524|trans-2,3-enoyl-CoA reductase##BC034484|TECR|9524|trans-2,3-enoyl-CoA reductase##AF222742|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038959|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ891949|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ895135|TECR|9524|trans-2,3-enoyl-CoA reductase##EU832830|TECR|9524|trans-2,3-enoyl-CoA reductase##GQ129437|TECR|9524|trans-2,3-enoyl-CoA reductase##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333##BC082991|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AF114491|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK301458|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK222891|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK298700|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2	0.0	
chr20	44001966	44002052	reg1001713.p1	3.491	+	TSC_hg19_v1_chr20_+_43992151 EU832322 EU832407	-9868	+	NM_001099791 NM_033542 TSC_hg19_v1_chr20_+_43991822 AK075264 AK172738 AX775821 BC048286 BC023562 AL591714 AK309429	-10192	+	NM_001197129	-11433	+	CU691416 BC036785 NM_014477 AB017802	4945	-	NM_001197139 NM_001048221 NM_001048222 TSC_hg19_v1_chr20_+_44034950 NM_001197140 AF220191 NM_018478	32828	+	TSC_hg19_v1_chr20_+_44035227 NM_001048223 NM_001048224 AJ276469 BC001105 BC012818 AL591565 AK000531	33312	+	EU832322|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##EU832407|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_001099791|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_033542|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK075264|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK172738|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC048286|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC023562|SYS1-DBNDD2|767557|SYS1-DBNDD2 readthrough##AL591714|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##AK309429|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##NM_001197129|SYS1|90196|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)##BC036785|TP53TG5|27296|TP53 target 5##NM_014477|TP53TG5|27296|TP53 target 5##AB017802|TP53TG5|27296|TP53 target 5##NM_001197139|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048221|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048222|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001197140|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AF220191|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_018478|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048223|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##NM_001048224|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AJ276469|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##BC001105|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##BC012818|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AL591565|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2##AK000531|DBNDD2|55861|dysbindin (dystrobrevin binding protein 1) domain containing 2	0.070399	
chr2	132440188	132440320	reg1031651.p2	3.491	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-154748	+	AK304811 TSC_hg19_v1_chr2_+_132250648 AK293811 AK300337 AK303293 AK308371 BC093080	-189669	+	TSC_hg19_v1_chr2_-_132250072 NM_001085365	-190193	-	AF038169 NM_013310	39809	+	BC043584 NM_214461	118979	-	AK122643 NM_001508	733892	+	BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK304811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK293811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK300337|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK303293|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK308371|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC093080|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39	0.057075	
chr22	21113081	21113162	reg1042333.p1	3.491	+	L36151 NM_002650	-24167	-	TSC_hg19_v1_chr22_+_20918811 U80745	-194297	+	BC017110 TSC_hg19_v1_chr22_+_20909388	-203814	+	TSC_hg19_v1_chr22_+_21128411 NM_000185 AK314200 AK225292 BC035028	15275	+	AB384703 TSC_hg19_v1_chr22_-_21213029 AK302424	99909	-	AB210002 TSC_hg19_v1_chr22_-_21213071	99950	-	L36151|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##NM_002650|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##U80745|MED15|51586|mediator complex subunit 15##BC017110|MED15|51586|mediator complex subunit 15##NM_000185|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK314200|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK225292|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##BC035028|SERPIND1|3053|serpin peptidase inhibitor, clade D (heparin cofactor), member 1##AK302424|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha##AB210002|PI4KA|5297|phosphatidylinositol 4-kinase, catalytic, alpha	0.78849	CTCF.p2:37:0.788
chr3	191930253	191930347	reg1036166.p1	3.491	+	AY858112 NM_001083308	-751349	+	AK090630 AX746546 NM_198152	-881976	-	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	-883134	+	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	196543	-	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	515065	-	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	705336	-	AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2	0.0	
chr3	23446705	23446863	reg1035728.p2	3.491	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	-202029	+	TSC_hg19_v1_chr3_+_23244600 AK307075	-202201	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-1032650	-	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	400626	+	AK314854 TSC_hg19_v1_chr3_+_23847474	400690	+	AK295354 NM_001202476	405149	+	AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK310298|ZNF385D|79750|zinc finger protein 385D##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##AK314854|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_001202476|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.0	
chr3	46469042	46469160	reg1037600.p2	3.491	+	AF015525 NM_003965 AF014958 BC071682 BC025717 BC096075 BC096076 BC099623 AK296673 NM_001130910 AK313312 AF015524	-20205	+	NM_000579 NM_001100168	-57469	+	TSC_hg19_v1_chr3_+_46395601 AK292920 U03905	-73494	+	AK316330 U84119 AK298035 NM_001199149	36017	-	M83205 X52941 AF332168 AY137470 AY178998 AY875691 DQ522304 EU779935 AB527812 AY360320 DQ892855 DQ896102 M83202 M93150 AY165046 AK290859 AK292813 AK303889 BC015822 BC022347 BC015823 AY493417 NM_002343 X53961	37396	-	AJ312776 NM_031440 BC131756 AY562237	70417	+	AF015525|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_003965|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC071682|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC096075|CCRL2|9034|chemokine (C-C motif) receptor-like 2##BC096076|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK296673|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_001130910|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AK313312|CCRL2|9034|chemokine (C-C motif) receptor-like 2##AF015524|CCRL2|9034|chemokine (C-C motif) receptor-like 2##NM_000579|CCR5|1234|chemokine (C-C motif) receptor 5##NM_001100168|CCR5|1234|chemokine (C-C motif) receptor 5##AK292920|CCR2|729230|chemokine (C-C motif) receptor 2##U03905|CCR2|729230|chemokine (C-C motif) receptor 2##AK316330|LTF|4057|lactotransferrin##U84119|LTF|4057|lactotransferrin##AK298035|LTF|4057|lactotransferrin##NM_001199149|LTF|4057|lactotransferrin##M83205|LTF|4057|lactotransferrin##X52941|LTF|4057|lactotransferrin##AF332168|LTF|4057|lactotransferrin##AY137470|LTF|4057|lactotransferrin##AY178998|LTF|4057|lactotransferrin##AY875691|LTF|4057|lactotransferrin##DQ522304|LTF|4057|lactotransferrin##EU779935|LTF|4057|lactotransferrin##AY360320|LTF|4057|lactotransferrin##DQ892855|LTF|4057|lactotransferrin##DQ896102|LTF|4057|lactotransferrin##M83202|LTF|4057|lactotransferrin##M93150|LTF|4057|lactotransferrin##AY165046|LTF|4057|lactotransferrin##AK290859|LTF|4057|lactotransferrin##AK292813|LTF|4057|lactotransferrin##AK303889|LTF|4057|lactotransferrin##BC015822|LTF|4057|lactotransferrin##BC022347|LTF|4057|lactotransferrin##BC015823|LTF|4057|lactotransferrin##AY493417|LTF|4057|lactotransferrin##NM_002343|LTF|4057|lactotransferrin##X53961|LTF|4057|lactotransferrin##AJ312776|RTP3|83597|receptor (chemosensory) transporter protein 3##NM_031440|RTP3|83597|receptor (chemosensory) transporter protein 3##BC131756|RTP3|83597|receptor (chemosensory) transporter protein 3##AY562237|RTP3|83597|receptor (chemosensory) transporter protein 3	0.141232	
chr6	56934401	56934468	reg1044816.p2	3.491	+	TSC_hg19_v1_chr6_+_56911464 BC012011 BC029372 AK295519 AK290988 AB587556 CU691960	-22947	+	TSC_hg19_v1_chr6_+_56911328 BC041125 NM_020931	-23088	+	BC036119 TSC_hg19_v1_chr6_+_56819931 AK054724	-114428	+	TSC_hg19_v1_chr6_+_56954826 AY055204 NM_001031623 NM_015555	20380	+	TSC_hg19_v1_chr6_+_56954923 BC021712	20472	+	TSC_hg19_v1_chr6_+_56954966 AK302577	20529	+	BC012011|KIAA1586|57691|KIAA1586##BC029372|KIAA1586|57691|KIAA1586##AK295519|KIAA1586|57691|KIAA1586##AK290988|KIAA1586|57691|KIAA1586##BC041125|KIAA1586|57691|KIAA1586##NM_020931|KIAA1586|57691|KIAA1586##BC036119|BEND6|221336|BEN domain containing 6##AK054724|BEND6|221336|BEN domain containing 6##AY055204|ZNF451|26036|zinc finger protein 451##NM_001031623|ZNF451|26036|zinc finger protein 451##NM_015555|ZNF451|26036|zinc finger protein 451##BC021712|ZNF451|26036|zinc finger protein 451##AK302577|ZNF451|26036|zinc finger protein 451	0.0	
chr7	572653	572790	reg1027602.p3	3.491	+	TSC_hg19_v1_chr7_-_559484 NM_002607 NM_033023	-13236	-	X03795 X06374 TSC_hg19_v1_chr7_-_559093	-13657	-	TSC_hg19_v1_chr7_-_558849 AK292217	-13887	-	AK289464 TSC_hg19_v1_chr7_-_752095 AK297337	179377	-	BC036828 TSC_hg19_v1_chr7_-_752142 AK315951 NM_002735	179426	-	NM_001164762	179855	-	NM_002607|PDGFA|5154|platelet-derived growth factor alpha polypeptide##NM_033023|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X03795|PDGFA|5154|platelet-derived growth factor alpha polypeptide##X06374|PDGFA|5154|platelet-derived growth factor alpha polypeptide##AK292217|PDGFA|5154|platelet-derived growth factor alpha polypeptide##AK289464|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK297337|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##BC036828|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##AK315951|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_002735|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta##NM_001164762|PRKAR1B|5575|protein kinase, cAMP-dependent, regulatory, type I, beta	0.0	
chr8	67089865	67090018	reg1009987.p3	3.491	+	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	-50601	+	NM_033105 BC016742 AF368276 AL133660	-156122	+	TSC_hg19_v1_chr8_-_66754300 AK292680	-335649	-	BC002599 BC011031 AK075431 NM_000756	826	-	TSC_hg19_v1_chr8_+_67341260 D25218 NM_015169 BC013043 AK024716 BC001811 DQ892772 EU176745	251365	+	NM_144650 AY033237 AK056992 AK300881 BC047492 BC064634 AK293530 AK300243 AK294114 BC110290	254791	+	AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AK292680|PDE7A|5150|phosphodiesterase 7A##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone##D25218|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_015169|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC013043|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##AK024716|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##BC001811|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##DQ892772|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##EU176745|RRS1|23212|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)##NM_144650|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AY033237|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK056992|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300881|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC047492|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC064634|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK293530|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK300243|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##AK294114|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1##BC110290|ADHFE1|137872|alcohol dehydrogenase, iron containing, 1	0.0	
chr11	36280450	36280543	reg1033873.p1	3.490	+	BC136286 BC143823 BC143824 TSC_hg19_v1_chr11_+_35965585 AK293930 AK075546 AK299186 NM_174902 BC042754	-314885	+	AB529107 CU680538 DQ891061 DQ894241 TSC_hg19_v1_chr11_+_35684686	-595823	+	TSC_hg19_v1_chr11_+_35684427 BC024031 AK074242 AJ249128	-596046	+	TSC_hg19_v1_chr11_-_36310966 AY542164 CU679845 DQ892672 DQ895914 AK290065 AK314477 AK055668 AL136688 BC010892	30457	-	TSC_hg19_v1_chr11_-_36310975 AK295590 AK223213 AK298978 AF161515 NM_001101653 NM_014186	30490	-	NM_001160167 AK055042	37284	+	BC136286|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143823|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC143824|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK293930|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK075546|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##AK299186|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##NM_174902|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##BC042754|LDLRAD3|143458|low density lipoprotein receptor class A domain containing 3##DQ891061|TRIM44|54765|tripartite motif containing 44##DQ894241|TRIM44|54765|tripartite motif containing 44##BC024031|TRIM44|54765|tripartite motif containing 44##AK074242|TRIM44|54765|tripartite motif containing 44##AJ249128|TRIM44|54765|tripartite motif containing 44##AY542164|COMMD9|29099|COMM domain containing 9##DQ892672|COMMD9|29099|COMM domain containing 9##DQ895914|COMMD9|29099|COMM domain containing 9##AK290065|COMMD9|29099|COMM domain containing 9##AK314477|COMMD9|29099|COMM domain containing 9##AK055668|COMMD9|29099|COMM domain containing 9##AL136688|COMMD9|29099|COMM domain containing 9##BC010892|COMMD9|29099|COMM domain containing 9##AK295590|COMMD9|29099|COMM domain containing 9##AK223213|COMMD9|29099|COMM domain containing 9##AK298978|COMMD9|29099|COMM domain containing 9##AF161515|COMMD9|29099|COMM domain containing 9##NM_001101653|COMMD9|29099|COMM domain containing 9##NM_014186|COMMD9|29099|COMM domain containing 9##NM_001160167|PRR5L|79899|proline rich 5 like##AK055042|PRR5L|79899|proline rich 5 like	0.311531	CTCF.p2:2:0.271
chr1	182991686	182991770	reg1042763.p1	3.490	+	BC050305 BC132764 BC144326 AF288398 NM_030933 BC026084	-69147	-	TSC_hg19_v1_chr1_-_182922024 AF288397 HQ258630 BC026086	-69592	-	TSC_hg19_v1_chr1_+_182808481 AK308165 BC137136 BC144494 BC014246 AF086352 BC025245 BC008773 L13848	-183218	+	TSC_hg19_v1_chr1_+_182992572 BC067813 NM_002293 J03202	776	+	TSC_hg19_v1_chr1_+_182992694 AB385108	1044	+	BC035429 TSC_hg19_v1_chr1_+_183114284	122523	+	BC050305|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC132764|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC144326|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##AF288398|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##NM_030933|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC026084|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##AF288397|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##HQ258630|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##BC026086|SHCBP1L|81626|SHC SH2-domain binding protein 1-like##AK308165|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##BC137136|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##BC144494|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##BC014246|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##AF086352|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##BC025245|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##BC008773|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##L13848|DHX9|1660|DEAH (Asp-Glu-Ala-His) box polypeptide 9##BC067813|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##NM_002293|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##J03202|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)##BC035429|LAMC1|3915|laminin, gamma 1 (formerly LAMB2)	0.0	
chr1	28559315	28559431	reg1030359.p1	3.490	+	S52624 AK292053 NM_001164721 NM_001164722	-38961	-	NM_000952 NM_001164723	-55919	-	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-144249	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	158	-	TSC_hg19_v1_chr1_+_28562634 NM_016311 NM_178190 NM_178191 AK316600 BC009677 AK000934 AB029042 BT009849 CR457097 EU832478 EU832558 BC017562 BC004955	3276	+	TSC_hg19_v1_chr1_+_28586034 NM_031459 BC013304 AY123223 BC033719 AL136551 AK315710 DQ892827 DQ896073 EU831582 EU831667 AB529110 CU680558	26785	+	S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_016311|ATPIF1|93974|ATPase inhibitory factor 1##NM_178190|ATPIF1|93974|ATPase inhibitory factor 1##NM_178191|ATPIF1|93974|ATPase inhibitory factor 1##AK316600|ATPIF1|93974|ATPase inhibitory factor 1##BC009677|ATPIF1|93974|ATPase inhibitory factor 1##AK000934|ATPIF1|93974|ATPase inhibitory factor 1##AB029042|ATPIF1|93974|ATPase inhibitory factor 1##BT009849|ATPIF1|93974|ATPase inhibitory factor 1##CR457097|ATPIF1|93974|ATPase inhibitory factor 1##EU832478|ATPIF1|93974|ATPase inhibitory factor 1##EU832558|ATPIF1|93974|ATPase inhibitory factor 1##BC017562|ATPIF1|93974|ATPase inhibitory factor 1##BC004955|ATPIF1|93974|ATPase inhibitory factor 1##NM_031459|SESN2|83667|sestrin 2##BC013304|SESN2|83667|sestrin 2##AY123223|SESN2|83667|sestrin 2##BC033719|SESN2|83667|sestrin 2##AL136551|SESN2|83667|sestrin 2##AK315710|SESN2|83667|sestrin 2##DQ892827|SESN2|83667|sestrin 2##DQ896073|SESN2|83667|sestrin 2##EU831582|SESN2|83667|sestrin 2##EU831667|SESN2|83667|sestrin 2	0.0	
chr13	53477649	53477734	reg1042141.p2	3.490	+	AF061573 AK293747 AK297652 BC036025 NM_002590 NM_032949 TSC_hg19_v1_chr13_-_53422776	-54916	-	TSC_hg19_v1_chr13_-_53313956 BC025659 NM_001011705 NM_007015	-163729	-	AB006000 CR541910 TSC_hg19_v1_chr13_-_53313891	-163827	-	AK000683 NM_006418 BC117329 TSC_hg19_v1_chr13_+_53602947 AY358567 HQ258281 AF097021 AK300947	125221	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	4237425	+	AK097615 NM_001130404 NM_001130405 NM_001130406 NM_001130407 NM_198441 BC120931 BC120932	4243995	+	AF061573|PCDH8|5100|protocadherin 8##AK293747|PCDH8|5100|protocadherin 8##AK297652|PCDH8|5100|protocadherin 8##BC036025|PCDH8|5100|protocadherin 8##NM_002590|PCDH8|5100|protocadherin 8##NM_032949|PCDH8|5100|protocadherin 8##BC025659|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_001011705|LECT1|11061|leukocyte cell derived chemotaxin 1##NM_007015|LECT1|11061|leukocyte cell derived chemotaxin 1##AB006000|LECT1|11061|leukocyte cell derived chemotaxin 1##CR541910|LECT1|11061|leukocyte cell derived chemotaxin 1##AK000683|OLFM4|10562|olfactomedin 4##NM_006418|OLFM4|10562|olfactomedin 4##BC117329|OLFM4|10562|olfactomedin 4##AY358567|OLFM4|10562|olfactomedin 4##HQ258281|OLFM4|10562|olfactomedin 4##AF097021|OLFM4|10562|olfactomedin 4##AK300947|OLFM4|10562|olfactomedin 4##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A##AK097615|PRR20A|122183|proline rich 20A##NM_001130404|PRR20B|729233|proline rich 20B##NM_001130405|PRR20C|729240|proline rich 20C##NM_001130406|PRR20D|729246|proline rich 20D##NM_001130407|PRR20E|729250|proline rich 20E##NM_198441|PRR20A|122183|proline rich 20A##BC120931|PRR20A|122183|proline rich 20A##BC120932|PRR20A|122183|proline rich 20A	0.0	
chr14	68764978	68765085	reg1037548.p1	3.490	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-478511	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-481732	-	AK315462 NM_152443	-596429	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	494689	-	NM_001244698 NM_004926	495599	-	NM_001244701 AB528867	497953	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr14	71609484	71609651	reg1030208.p2	3.490	+	TSC_hg19_v1_chr14_+_71374441 BC140784	-235116	+	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	-235434	+	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	-333758	-	AF090989 AF090990 NM_015556	386474	+	AK294895 NM_001204423	789249	+	TSC_hg19_v1_chr14_+_72399149 AK294486 NM_001204424	789586	+	BC140784|PCNX|22990|pecanex homolog (Drosophila)##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AF090989|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AF090990|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##NM_015556|SIPA1L1|26037|signal-induced proliferation-associated 1 like 1##AK294895|RGS6|9628|regulator of G-protein signaling 6##NM_001204423|RGS6|9628|regulator of G-protein signaling 6##AK294486|RGS6|9628|regulator of G-protein signaling 6##NM_001204424|RGS6|9628|regulator of G-protein signaling 6	0.18837	
chr17	40202385	40202502	reg1027676.p1	3.490	+	NM_001242704	-12400	-	TSC_hg19_v1_chr17_+_40172124 AK027265 AK297975 AK054571 BC007316 BC007450	-30297	+	NM_001144927 NM_001144928 NM_001144929 NM_017595 TSC_hg19_v1_chr17_+_40172107	-30345	+	BC014949 AK296840 AK300900 AK021416 AK225549 NM_024119	62275	-	TSC_hg19_v1_chr17_-_40273386 AB527835 AF029777 BC032743 BC105977 BC039907 NM_021078	70906	-	NM_033194 BC093991 BC093993 AK130947	72358	+	NM_001242704|ZNF385C|201181|zinc finger protein 385C##AK027265|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK297975|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK054571|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007316|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007450|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144927|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144928|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144929|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_017595|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC014949|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK296840|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK300900|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK021416|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK225549|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_024119|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AF029777|KAT2A|2648|K(lysine) acetyltransferase 2A##BC032743|KAT2A|2648|K(lysine) acetyltransferase 2A##BC105977|KAT2A|2648|K(lysine) acetyltransferase 2A##BC039907|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_021078|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_033194|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093991|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##BC093993|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9##AK130947|HSPB9|94086|heat shock protein, alpha-crystallin-related, B9	0.177469	
chr21	39288685	39288815	reg1034608.p1	3.490	+	D87327 NM_002240 TSC_hg19_v1_chr21_-_39288761	-39	-	NM_130438 NM_001396 U52373 D85759 U58496	-496130	+	D86550 NM_130436	-497544	+	HQ257978 DQ179113 BC069729 BC096162 BC096163 BC096164 AB000099 NM_005867	204651	-	BC013327 NM_002243	339913	+	D87291 NM_170736 AK292812	340179	+	D87327|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_002240|KCNJ6|3763|potassium inwardly-rectifying channel, subfamily J, member 6##NM_130438|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_001396|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U52373|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D85759|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##U58496|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##D86550|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##NM_130436|DYRK1A|1859|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A##HQ257978|DSCR4|10281|Down syndrome critical region gene 4##DQ179113|DSCR4|10281|Down syndrome critical region gene 4##BC069729|DSCR4|10281|Down syndrome critical region gene 4##BC096162|DSCR4|10281|Down syndrome critical region gene 4##BC096163|DSCR4|10281|Down syndrome critical region gene 4##BC096164|DSCR4|10281|Down syndrome critical region gene 4##AB000099|DSCR4|10281|Down syndrome critical region gene 4##NM_005867|DSCR4|10281|Down syndrome critical region gene 4##BC013327|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_002243|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##D87291|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##NM_170736|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15##AK292812|KCNJ15|3772|potassium inwardly-rectifying channel, subfamily J, member 15	0.0	
chr22	17386908	17387042	reg1042854.p1	3.490	+	BC137521 BC137522 BC144679 AY989815 AK098608 AY534240 BC045548 NM_175878	-84406	-	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	-313406	-	NM_001005239	-937172	-	AB076978 NM_001037814	102136	-	TSC_hg19_v1_chr22_+_17565850 NM_014339	178876	+	TSC_hg19_v1_chr22_+_17565906 BC011624	178927	+	BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_001005239|OR11H1|81061|olfactory receptor, family 11, subfamily H, member 1##AB076978|GAB4|128954|GRB2-associated binding protein family, member 4##NM_001037814|GAB4|128954|GRB2-associated binding protein family, member 4##NM_014339|IL17RA|23765|interleukin 17 receptor A##BC011624|IL17RA|23765|interleukin 17 receptor A	0.0	
chr5	17413461	17413581	reg1042417.p1	3.490	+	TSC_hg19_v1_chr5_+_17217804 AF039656	-195681	+	TSC_hg19_v1_chr5_+_17217739 AK295995 AK314152 NM_006317 BC000518	-195909	+	AB018342 BC150285 TSC_hg19_v1_chr5_-_16936386 BC014956 NM_012334	-477136	-	AK295087 BC031051 NM_001167667 NM_004934	2574801	-	TSC_hg19_v1_chr5_+_21459621 AK290693	4046088	+	BC070045 TSC_hg19_v1_chr5_+_21459633 BC147000 BC038977 BC052307 BC094818 AK095656	4046127	+	AF039656|BASP1|10409|brain abundant, membrane attached signal protein 1##AK295995|BASP1|10409|brain abundant, membrane attached signal protein 1##AK314152|BASP1|10409|brain abundant, membrane attached signal protein 1##NM_006317|BASP1|10409|brain abundant, membrane attached signal protein 1##BC000518|BASP1|10409|brain abundant, membrane attached signal protein 1##AB018342|MYO10|4651|myosin X##BC150285|MYO10|4651|myosin X##BC014956|MYO10|4651|myosin X##NM_012334|MYO10|4651|myosin X##AK295087|CDH18|1016|cadherin 18, type 2##BC031051|CDH18|1016|cadherin 18, type 2##NM_001167667|CDH18|1016|cadherin 18, type 2##NM_004934|CDH18|1016|cadherin 18, type 2##AK290693|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC070045|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC147000|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC038977|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC052307|GUSBP1|728411|glucuronidase, beta pseudogene 1##BC094818|GUSBP1|728411|glucuronidase, beta pseudogene 1##AK095656|GUSBP1|728411|glucuronidase, beta pseudogene 1	0.204344	CTCF.p2:-12:0.204
chr5	323918	324053	reg1035313.p2	3.490	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-19695	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-52180	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-52217	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	119245	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	119365	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	149127	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.0	
chr8	142216782	142216910	reg1033488.p2	3.490	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-78109	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-205590	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-571222	-	AK128212 NM_001080431	21826	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	47344	-	NM_005293	160518	-	NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.301551	CTCF.p2:88:0.302
chr8	59069538	59069604	reg1043077.p1	3.490	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-162414	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1163145	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1163169	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	254314	+	X56088 M93133 BC101777 BC112184 NM_000780	343136	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	396181	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.793523	CTCF.p2:35:0.794
chr10	112326834	112326930	reg1035372.p1	3.489	+	NM_004419 TSC_hg19_v1_chr10_+_112257664 U15932 AB209823 BC062545 U16996 AB489171 EU831449 EU831536	-69131	+	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	-262182	-	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	-262289	-	TSC_hg19_v1_chr10_+_112327452 NM_005445 AK315845 AK289771 AF020043 BC047324 AB587343	610	+	AF067163 TSC_hg19_v1_chr10_+_112344155	17233	+	TSC_hg19_v1_chr10_+_112404115 EU822950 NM_001134363	77247	+	NM_004419|DUSP5|1847|dual specificity phosphatase 5##U15932|DUSP5|1847|dual specificity phosphatase 5##AB209823|DUSP5|1847|dual specificity phosphatase 5##BC062545|DUSP5|1847|dual specificity phosphatase 5##U16996|DUSP5|1847|dual specificity phosphatase 5##EU831449|DUSP5|1847|dual specificity phosphatase 5##EU831536|DUSP5|1847|dual specificity phosphatase 5##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##NM_005445|SMC3|9126|structural maintenance of chromosomes 3##AK315845|SMC3|9126|structural maintenance of chromosomes 3##AK289771|SMC3|9126|structural maintenance of chromosomes 3##AF020043|SMC3|9126|structural maintenance of chromosomes 3##BC047324|SMC3|9126|structural maintenance of chromosomes 3##AF067163|SMC3|9126|structural maintenance of chromosomes 3##EU822950|RBM20|282996|RNA binding motif protein 20##NM_001134363|RBM20|282996|RNA binding motif protein 20	0.0	
chr12	12189087	12189170	reg1037217.p2	3.489	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-386142	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-386354	+	TSC_hg19_v1_chr12_+_11802659 AK289441	-386455	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	34755	+	AF281254 AF281255 NM_030766 NM_138722	35273	+	AK074543 TSC_hg19_v1_chr12_-_12291395	102256	-	U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AK289441|ETV6|2120|ets variant 6##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6	0.830527	CTCF.p2:8:0.831
chr1	236003710	236003864	reg1034821.p2	3.489	+	BC022485 NM_001098721 NM_004485	-189734	-	TSC_hg19_v1_chr1_-_235813301 AK311781 NM_001098722	-190605	-	BC029564 NM_152490 TSC_hg19_v1_chr1_-_235667782	-336006	-	TSC_hg19_v1_chr1_-_236030193 BC020793	26396	-	NM_000081 U67615 TSC_hg19_v1_chr1_-_236030233	26457	-	TSC_hg19_v1_chr1_-_236228375 AB209448 CU692272	224590	-	BC022485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098721|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_004485|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##AK311781|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##NM_001098722|GNG4|2786|guanine nucleotide binding protein (G protein), gamma 4##BC029564|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_152490|B3GALNT2|148789|beta-1,3-N-acetylgalactosaminyltransferase 2##NM_000081|LYST|1130|lysosomal trafficking regulator##U67615|LYST|1130|lysosomal trafficking regulator##AB209448|NID1|4811|nidogen 1	0.0	
chr1	44119189	44119308	reg1041042.p1	3.489	+	BC002558 TSC_hg19_v1_chr1_+_44115828 AB014577	-3404	+	AK300039 TSC_hg19_v1_chr1_+_44115819	-3437	+	TSC_hg19_v1_chr1_+_44115796 NM_014663	-3449	+	TSC_hg19_v1_chr1_-_44173037 BC094867	53775	-	AK301829 AY051143 NM_006279 NM_174963 NM_174964 NM_174965 NM_174966 NM_174967 NM_174968 NM_174969 NM_174970 NM_174971 TSC_hg19_v1_chr1_+_44173217 BC050380	53970	+	AF120274 NM_001136215 NM_057090 NM_057091	279743	+	BC002558|KDM4A|9682|lysine (K)-specific demethylase 4A##AB014577|KDM4A|9682|lysine (K)-specific demethylase 4A##AK300039|KDM4A|9682|lysine (K)-specific demethylase 4A##NM_014663|KDM4A|9682|lysine (K)-specific demethylase 4A##BC094867|LOC100132774|100132774|uncharacterized LOC100132774##AK301829|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##AY051143|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_006279|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174963|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174964|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174965|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174966|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174967|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174968|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174969|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174970|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174971|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC050380|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##AF120274|ARTN|9048|artemin##NM_001136215|ARTN|9048|artemin##NM_057090|ARTN|9048|artemin##NM_057091|ARTN|9048|artemin	0.011275	
chr14	75690515	75690696	reg1042463.p1	3.489	+	TSC_hg19_v1_chr14_-_75643341 NM_006827	-47253	-	BC001496 BC001825 TSC_hg19_v1_chr14_-_75643334	-47272	-	TSC_hg19_v1_chr14_-_75643322 AK296800 AK312384	-47285	-	NM_005252 TSC_hg19_v1_chr14_+_75745530 AK097379 AK291326 AK298659 BX647104 BC004490 S65138 DQ893444 DQ896750 AB385594 CR541785 CR542267 CU678740	54977	+	NM_001135047 TSC_hg19_v1_chr14_+_75894724	204036	+	NM_001135048 BC068196 NM_130469 TSC_hg19_v1_chr14_+_75895106	204408	+	NM_006827|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001496|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##BC001825|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK296800|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##AK312384|TMED10|10972|transmembrane emp24-like trafficking protein 10 (yeast)##NM_005252|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK097379|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK291326|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##AK298659|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BX647104|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##BC004490|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##S65138|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ893444|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##DQ896750|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR541785|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##CR542267|FOS|2353|FBJ murine osteosarcoma viral oncogene homolog##NM_001135047|JDP2|122953|Jun dimerization protein 2##NM_001135048|JDP2|122953|Jun dimerization protein 2##BC068196|JDP2|122953|Jun dimerization protein 2##NM_130469|JDP2|122953|Jun dimerization protein 2	0.0	
chr15	28341043	28341119	reg1042850.p1	3.489	+	NM_033223 BC029850 BC045709 S82769	-1124534	+	L08485 AK290453 TSC_hg19_v1_chr15_+_27112237 NM_001165037	-1228845	+	NM_000810	-1229216	+	M99564 TSC_hg19_v1_chr15_-_28344462 BC012097 NM_000275	3352	-	AF071172 BC015486 BC142951 BC045544 NM_004667	226190	-	TSC_hg19_v1_chr15_+_29033278 AK302529	692242	+	NM_033223|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC029850|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##BC045709|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##S82769|GABRG3|2567|gamma-aminobutyric acid (GABA) A receptor, gamma 3##L08485|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##AK290453|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_001165037|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##NM_000810|GABRA5|2558|gamma-aminobutyric acid (GABA) A receptor, alpha 5##M99564|OCA2|4948|oculocutaneous albinism II##BC012097|OCA2|4948|oculocutaneous albinism II##NM_000275|OCA2|4948|oculocutaneous albinism II##AF071172|HERC2|8924|hect domain and RLD 2##BC015486|HERC2|8924|hect domain and RLD 2##BC142951|HERC2|8924|hect domain and RLD 2##BC045544|HERC2|8924|hect domain and RLD 2##NM_004667|HERC2|8924|hect domain and RLD 2##AK302529|LOC100289656|100289656|Dexi homolog (mouse) pseudogene	0.0	
chr15	81213253	81213340	reg1039232.p1	3.489	+	TSC_hg19_v1_chr15_+_81071711 AB103330 AK000465 AY581148 AY581149 AY585237 NM_018689 BC020256	-141575	+	TSC_hg19_v1_chr15_+_80987953 AL390079 AK298606	-225287	+	TSC_hg19_v1_chr15_+_80987661 BC115003 NM_021214 BC059401	-225634	+	D42039 TSC_hg19_v1_chr15_-_81282157 AK301416 AK026606 BC009210 BC012746 AY359110 NM_015154	68904	-	TSC_hg19_v1_chr15_+_81293344 NM_022566	80048	+	AK302120 BC062471 NM_173528 AK307565	213331	+	AB103330|KIAA1199|57214|KIAA1199##AK000465|KIAA1199|57214|KIAA1199##AY581148|KIAA1199|57214|KIAA1199##AY581149|KIAA1199|57214|KIAA1199##NM_018689|KIAA1199|57214|KIAA1199##BC020256|KIAA1199|57214|KIAA1199##AL390079|FAM108C1|58489|family with sequence similarity 108, member C1##AK298606|FAM108C1|58489|family with sequence similarity 108, member C1##BC115003|FAM108C1|58489|family with sequence similarity 108, member C1##NM_021214|FAM108C1|58489|family with sequence similarity 108, member C1##BC059401|FAM108C1|58489|family with sequence similarity 108, member C1##D42039|MESDC2|23184|mesoderm development candidate 2##AK026606|MESDC2|23184|mesoderm development candidate 2##BC009210|MESDC2|23184|mesoderm development candidate 2##BC012746|MESDC2|23184|mesoderm development candidate 2##AY359110|MESDC2|23184|mesoderm development candidate 2##NM_015154|MESDC2|23184|mesoderm development candidate 2##NM_022566|MESDC1|59274|mesoderm development candidate 1##AK302120|C15orf26|161502|chromosome 15 open reading frame 26##BC062471|C15orf26|161502|chromosome 15 open reading frame 26##NM_173528|C15orf26|161502|chromosome 15 open reading frame 26##AK307565|C15orf26|161502|chromosome 15 open reading frame 26	0.20536	CTCF.p2:31:0.205
chr16	48558892	48558977	reg1036077.p1	3.489	+	TSC_hg19_v1_chr16_-_48419322 BC018193 BC035562 NM_003031 AK225895 U76247	-139682	-	NM_001006610 AK023458 AK313861 TSC_hg19_v1_chr16_-_48399799	-159143	-	BC042550 TSC_hg19_v1_chr16_-_48399765	-159174	-	BC051897 TSC_hg19_v1_chr16_-_48644092 AB014515 BC152472 NM_153029	85182	-	AB527638 TSC_hg19_v1_chr16_-_49315397	756459	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	756566	-	BC018193|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC035562|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_003031|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK225895|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##U76247|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##NM_001006610|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK023458|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##AK313861|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC042550|SIAH1|6477|seven in absentia homolog 1 (Drosophila)##BC051897|N4BP1|9683|NEDD4 binding protein 1##AB014515|N4BP1|9683|NEDD4 binding protein 1##BC152472|N4BP1|9683|NEDD4 binding protein 1##NM_153029|N4BP1|9683|NEDD4 binding protein 1##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor	0.0	
chr16	81832553	81832682	reg1031492.p2	3.489	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-19687	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-19715	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	-19720	+	BC019670 AK315652 AK026740 NM_145168	212451	-	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	236244	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	236315	+	BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.0	
chr2	42124548	42124695	reg1033713.p1	3.489	+	Y12878 Y12885 AK291696 BX537482 NM_001112802	-1385049	-	Y13032 BX648299 TSC_hg19_v1_chr2_-_40679231	-1445399	-	AF108388 AF108389 M96368 AF128524 NM_001112800 NM_001112801 NM_001252624 NM_021097	-1467190	-	AK124893 NM_001242815	56321	-	TSC_hg19_v1_chr2_+_42275160 NM_138370	150511	+	AB528999 TSC_hg19_v1_chr2_+_42275979	151340	+	Y12878|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y12885|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK291696|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX537482|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112802|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##Y13032|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##BX648299|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108388|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF108389|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##M96368|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AF128524|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112800|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001112801|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_001252624|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##NM_021097|SLC8A1|6546|solute carrier family 8 (sodium/calcium exchanger), member 1##AK124893|LOC400950|400950|uncharacterized LOC400950##NM_001242815|LOC400950|400950|uncharacterized LOC400950##NM_138370|PKDCC|91461|protein kinase domain containing, cytoplasmic homolog (mouse)	0.0	
chr2	72098841	72098927	reg1034108.p1	3.489	+	TSC_hg19_v1_chr2_+_71693828 DQ267935 EU515161 EU515162 EU515163 EU515164 EU515165 EU515166 NM_001130455 NM_001130982 NM_001130983 NM_001130984 NM_001130985 NM_001130986 NM_001130987 AB527291	-404991	+	NM_001130976 NM_001130977 NM_001130978 NM_001130979 NM_001130980 NM_001130981 NM_003494 AF075575 BC171803 EU515155 EU515156 EU515157 EU515158 EU515159 EU515160	-418083	+	TSC_hg19_v1_chr2_+_71558911 NM_001014972 NM_001252612 NM_001252613 NM_014497 CR749322 D83032 BC010355 BX537425 AK291198 BC024000 BC143728 BC083513	-539987	+	AK295683 TSC_hg19_v1_chr2_-_72371202	272315	-	TSC_hg19_v1_chr2_-_72374955 AF252297 AK294814 BC069443 BC109205 FJ467289 NM_019885 CU686818 AK313433	276058	-	TSC_hg19_v1_chr2_-_73053163 AB384543 AB023136 NM_015189	954220	-	DQ267935|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515161|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515162|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515163|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515164|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515165|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515166|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130455|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130982|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130983|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130984|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130985|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130986|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130987|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130976|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130977|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130978|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130979|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130980|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001130981|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_003494|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##AF075575|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##BC171803|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515155|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515156|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515157|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515158|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515159|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##EU515160|DYSF|8291|dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive)##NM_001014972|ZNF638|27332|zinc finger protein 638##NM_001252612|ZNF638|27332|zinc finger protein 638##NM_001252613|ZNF638|27332|zinc finger protein 638##NM_014497|ZNF638|27332|zinc finger protein 638##CR749322|ZNF638|27332|zinc finger protein 638##D83032|ZNF638|27332|zinc finger protein 638##BC010355|ZNF638|27332|zinc finger protein 638##BX537425|ZNF638|27332|zinc finger protein 638##AK291198|ZNF638|27332|zinc finger protein 638##BC024000|ZNF638|27332|zinc finger protein 638##BC143728|ZNF638|27332|zinc finger protein 638##BC083513|ZNF638|27332|zinc finger protein 638##AK295683|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AF252297|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK294814|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC069443|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##BC109205|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##FJ467289|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##NM_019885|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AK313433|CYP26B1|56603|cytochrome P450, family 26, subfamily B, polypeptide 1##AB023136|EXOC6B|23233|exocyst complex component 6B##NM_015189|EXOC6B|23233|exocyst complex component 6B	0.0	
chr3	167812881	167812981	reg1024104.p3	3.489	+	NM_001122752 TSC_hg19_v1_chr3_+_167453508 AK290082 BC018043 NM_005025 CR627434 Z81326	-359442	+	BC002506 NM_007217 AF022385 NM_145860 TSC_hg19_v1_chr3_-_167452681 BC016353 NM_145859 AK291130	-360280	-	TSC_hg19_v1_chr3_-_167371732 AK097556	-441208	-	TSC_hg19_v1_chr3_-_167813072 U55853 BC143232 BC143233 BC171748	184	-	TSC_hg19_v1_chr3_-_167813684 AK307718 AK307557 NM_014498	500	-	BC130520 BC143951 BC143952 AF164154 AF164155 AF164156 AF164157 NM_001105077 NM_001163999 NM_005241 X54989	1051148	-	NM_001122752|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##AK290082|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC018043|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##NM_005025|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##CR627434|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##Z81326|SERPINI1|5274|serpin peptidase inhibitor, clade I (neuroserpin), member 1##BC002506|PDCD10|11235|programmed cell death 10##NM_007217|PDCD10|11235|programmed cell death 10##AF022385|PDCD10|11235|programmed cell death 10##NM_145860|PDCD10|11235|programmed cell death 10##BC016353|PDCD10|11235|programmed cell death 10##NM_145859|PDCD10|11235|programmed cell death 10##AK291130|PDCD10|11235|programmed cell death 10##AK097556|WDR49|151790|WD repeat domain 49##U55853|GOLIM4|27333|golgi integral membrane protein 4##BC143232|GOLIM4|27333|golgi integral membrane protein 4##BC143233|GOLIM4|27333|golgi integral membrane protein 4##BC171748|GOLIM4|27333|golgi integral membrane protein 4##AK307718|GOLIM4|27333|golgi integral membrane protein 4##AK307557|GOLIM4|27333|golgi integral membrane protein 4##NM_014498|GOLIM4|27333|golgi integral membrane protein 4##BC130520|MECOM|2122|MDS1 and EVI1 complex locus##BC143951|MECOM|2122|MDS1 and EVI1 complex locus##BC143952|MECOM|2122|MDS1 and EVI1 complex locus##AF164154|MECOM|2122|MDS1 and EVI1 complex locus##AF164155|MECOM|2122|MDS1 and EVI1 complex locus##AF164156|MECOM|2122|MDS1 and EVI1 complex locus##AF164157|MECOM|2122|MDS1 and EVI1 complex locus##NM_001105077|MECOM|2122|MDS1 and EVI1 complex locus##NM_001163999|MECOM|2122|MDS1 and EVI1 complex locus##NM_005241|MECOM|2122|MDS1 and EVI1 complex locus##X54989|MECOM|2122|MDS1 and EVI1 complex locus	0.0	
chr5	171308157	171308223	reg1044092.p2	3.489	+	BC006245 TSC_hg19_v1_chr5_+_170847089 AB007422 AB528345 AF211188 AM393798 BT019570 BT019571 DQ892736 DQ895983	-461059	+	AY358811 AF075292 NM_003862	-461528	+	AB042278 AB451236 AB451361 AB463949 BT007011 CU676967 CU677717 CU680364 CU692436 DQ892032 DQ895223 EF429251 X16934 TSC_hg19_v1_chr5_+_170815031	-493199	+	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	125338	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	125454	-	BC026213 NM_012300 NM_033644 NM_033645	125686	-	BC006245|FGF18|8817|fibroblast growth factor 18##AB007422|FGF18|8817|fibroblast growth factor 18##AF211188|FGF18|8817|fibroblast growth factor 18##AM393798|FGF18|8817|fibroblast growth factor 18##BT019570|FGF18|8817|fibroblast growth factor 18##BT019571|FGF18|8817|fibroblast growth factor 18##DQ892736|FGF18|8817|fibroblast growth factor 18##DQ895983|FGF18|8817|fibroblast growth factor 18##AY358811|FGF18|8817|fibroblast growth factor 18##AF075292|FGF18|8817|fibroblast growth factor 18##NM_003862|FGF18|8817|fibroblast growth factor 18##AB042278|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451236|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AB451361|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##BT007011|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ892032|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##DQ895223|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##EF429251|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##X16934|NPM1|4869|nucleophosmin (nucleolar phosphoprotein B23, numatrin)##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11	0.0	
chr6	107318784	107318958	reg1010507.p1	3.489	+	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	-241374	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	-241591	-	TSC_hg19_v1_chr6_+_106960443 U83115	-358460	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	30601	+	BC131628 NM_001080450	116764	-	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	461859	-	NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##U83115|AIM1|202|absent in melanoma 1##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2	0.0	
chr8	126164077	126164185	reg1038651.p1	3.489	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-60034	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-60074	-	TSC_hg19_v1_chr8_-_126104024 AK296970	-60109	-	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	278448	+	TSC_hg19_v1_chr8_-_126963395 BX648371	799282	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	1406424	-	NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##AK296970|KIAA0196|9897|KIAA0196##BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B	0.0	
chr8	133580424	133580536	reg1037109.p1	3.489	+	NM_004519 TSC_hg19_v1_chr8_-_133493146	-87403	-	TSC_hg19_v1_chr8_-_133492751 AB527350 BC128576	-87693	-	AB208890 AF033347 TSC_hg19_v1_chr8_-_133492689	-87857	-	TSC_hg19_v1_chr8_-_133687792 BC027589 BC047286 NM_012472 AK313107	107347	-	BC062592 AK057631 BC105783 NM_001145153 NM_144649	192380	-	TSC_hg19_v1_chr8_+_133787606 NM_016018 NM_032205 NM_198513	207103	+	NM_004519|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##BC027589|LRRC6|23639|leucine rich repeat containing 6##BC047286|LRRC6|23639|leucine rich repeat containing 6##NM_012472|LRRC6|23639|leucine rich repeat containing 6##AK313107|LRRC6|23639|leucine rich repeat containing 6##BC062592|TMEM71|137835|transmembrane protein 71##AK057631|TMEM71|137835|transmembrane protein 71##BC105783|TMEM71|137835|transmembrane protein 71##NM_001145153|TMEM71|137835|transmembrane protein 71##NM_144649|TMEM71|137835|transmembrane protein 71##NM_016018|PHF20L1|51105|PHD finger protein 20-like 1##NM_032205|PHF20L1|51105|PHD finger protein 20-like 1##NM_198513|PHF20L1|51105|PHD finger protein 20-like 1	0.796593	CTCF.p2:-2:0.772
chr9	4197728	4197860	reg1044304.p1	3.489	+	BC033899 NM_152629	-45612	-	TSC_hg19_v1_chr9_+_3526079 AK125504	-671706	+	TSC_hg19_v1_chr9_-_3525983 BC022191 NM_002919 NM_134428	-671790	-	TSC_hg19_v1_chr9_-_4299574 DQ438882 DQ438887 DQ438892 DQ438899 DQ438902	101789	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	102169	-	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	102237	-	BC033899|GLIS3|169792|GLIS family zinc finger 3##NM_152629|GLIS3|169792|GLIS family zinc finger 3##BC022191|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_002919|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##NM_134428|RFX3|5991|regulatory factor X, 3 (influences HLA class II expression)##DQ438882|GLIS3|169792|GLIS family zinc finger 3##DQ438887|GLIS3|169792|GLIS family zinc finger 3##DQ438892|GLIS3|169792|GLIS family zinc finger 3##DQ438899|GLIS3|169792|GLIS family zinc finger 3##DQ438902|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3	0.975118	CTCF.p2:0:0.975
chr10	115540729	115540908	reg1027747.p2	3.488	+	BC037870 FJ236306 NM_182601	-16241	+	AK128811 NM_001193434 NM_001193435 NM_024889	-29606	+	TSC_hg19_v1_chr10_+_115439635 AK301437 AK223489 BC015799 AK300578 U40281 U37448 U67320	-101153	+	D42045 NM_014881 AK307187	73098	-	TSC_hg19_v1_chr10_+_115614419 NM_198514 AK090631 AX746547	73601	+	NM_000684 J03019	262991	+	BC037870|C10orf81|79949|chromosome 10 open reading frame 81##FJ236306|C10orf81|79949|chromosome 10 open reading frame 81##NM_182601|C10orf81|79949|chromosome 10 open reading frame 81##AK128811|C10orf81|79949|chromosome 10 open reading frame 81##NM_001193434|C10orf81|79949|chromosome 10 open reading frame 81##NM_001193435|C10orf81|79949|chromosome 10 open reading frame 81##NM_024889|C10orf81|79949|chromosome 10 open reading frame 81##AK301437|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##AK223489|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##BC015799|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##AK300578|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U40281|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U37448|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##U67320|CASP7|840|caspase 7, apoptosis-related cysteine peptidase##D42045|DCLRE1A|9937|DNA cross-link repair 1A##NM_014881|DCLRE1A|9937|DNA cross-link repair 1A##NM_198514|NHLRC2|374354|NHL repeat containing 2##AK090631|NHLRC2|374354|NHL repeat containing 2##NM_000684|ADRB1|153|adrenergic, beta-1-, receptor##J03019|ADRB1|153|adrenergic, beta-1-, receptor	0.0	
chr10	135203947	135204014	reg1040210.p1	3.488	+	AF312698 BC032778 NM_152911 NM_207127 NM_207128 TSC_hg19_v1_chr10_+_135192774 AY541516 AY541513 AY541514 AY541515 AY541517 AY541518 AY541519 AY541520 AY541521 AY541523 AY541524 AY358418 DQ891313 DQ893351 DQ894497 DQ896670	-11223	+	BT007123 BC013264 TSC_hg19_v1_chr10_-_135186855 BC008906 D13900 NM_004092	-17094	-	TSC_hg19_v1_chr10_-_135171524 AK310070 AK129527 BC129818 BC129819 NM_001098483 NM_198472	-32454	-	TSC_hg19_v1_chr10_+_135207660 NM_138384 BC026039 AK308997 BC004409 AK074976 AK293988 BC035721 EU831415 EU831508 BC026725 AK292515 AK125012	3752	+	BC040198 TSC_hg19_v1_chr10_-_135238130 NM_001012508	34122	-	TSC_hg19_v1_chr10_+_135340866 AK290822 NM_000773 J02625 AF182276 DQ149222 BC067435 BC067433 CU688292 AF084225 AJ853939 AJ853940 AJ877238	136952	+	AF312698|PAOX|196743|polyamine oxidase (exo-N4-amino)##BC032778|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_152911|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207127|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207128|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541516|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541513|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541514|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541515|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541517|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541518|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541519|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541520|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541521|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541523|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541524|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY358418|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ891313|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ893351|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ894497|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ896670|PAOX|196743|polyamine oxidase (exo-N4-amino)##BT007123|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##BC013264|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##BC008906|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##D13900|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##NM_004092|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##AK310070|C10orf125|282969|chromosome 10 open reading frame 125##AK129527|C10orf125|282969|chromosome 10 open reading frame 125##BC129818|C10orf125|282969|chromosome 10 open reading frame 125##BC129819|C10orf125|282969|chromosome 10 open reading frame 125##NM_001098483|C10orf125|282969|chromosome 10 open reading frame 125##NM_198472|C10orf125|282969|chromosome 10 open reading frame 125##NM_138384|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026039|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK308997|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC004409|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK074976|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK293988|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC035721|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831415|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831508|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026725|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK292515|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK125012|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC040198|SPRN|503542|shadow of prion protein homolog (zebrafish)##NM_001012508|SPRN|503542|shadow of prion protein homolog (zebrafish)##AK290822|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##NM_000773|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##J02625|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF182276|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##DQ149222|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067435|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067433|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF084225|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853939|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853940|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ877238|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1	0.0	
chr11	67159155	67159255	reg1040414.p1	3.488	+	AK298052 NM_001166212	-17558	-	DQ891525 DQ894715 AB528390 AY049779 BC066229 BC066230 BC066231 AF172854 BC012939 AF176911 NM_013246	-18099	-	AF179890 BC001334 TSC_hg19_v1_chr11_-_67121006 BC070250 AB209274 NM_021173	-38201	-	TSC_hg19_v1_chr11_+_67159464 BC014848 NM_004584 U53174 AK315348 CR536508	263	+	NM_001243224	1570	+	BT006629 AB464100 S57501 TSC_hg19_v1_chr11_-_67169297 AK313586 X70848 M63960 BC004482 BC001888	10069	-	AK298052|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_001166212|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ891525|CLCF1|23529|cardiotrophin-like cytokine factor 1##DQ894715|CLCF1|23529|cardiotrophin-like cytokine factor 1##AY049779|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066229|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066230|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC066231|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF172854|CLCF1|23529|cardiotrophin-like cytokine factor 1##BC012939|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF176911|CLCF1|23529|cardiotrophin-like cytokine factor 1##NM_013246|CLCF1|23529|cardiotrophin-like cytokine factor 1##AF179890|POLD4|57804|polymerase (DNA-directed), delta 4##BC001334|POLD4|57804|polymerase (DNA-directed), delta 4##BC070250|POLD4|57804|polymerase (DNA-directed), delta 4##AB209274|POLD4|57804|polymerase (DNA-directed), delta 4##NM_021173|POLD4|57804|polymerase (DNA-directed), delta 4##BC014848|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_004584|RAD9A|5883|RAD9 homolog A (S. pombe)##U53174|RAD9A|5883|RAD9 homolog A (S. pombe)##AK315348|RAD9A|5883|RAD9 homolog A (S. pombe)##CR536508|RAD9A|5883|RAD9 homolog A (S. pombe)##NM_001243224|RAD9A|5883|RAD9 homolog A (S. pombe)##BT006629|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##S57501|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##AK313586|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##X70848|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##M63960|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC004482|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme##BC001888|PPP1CA|5499|protein phosphatase 1, catalytic subunit, alpha isozyme	0.0	
chr13	111037902	111037993	reg1035444.p2	3.488	+	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	-78326	+	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	-78438	-	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	-235212	-	BX648393 TSC_hg19_v1_chr13_+_111134980	97011	+	AK025912 TSC_hg19_v1_chr13_+_111137262	99317	+	TSC_hg19_v1_chr13_+_111138079 M24766	100141	+	AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BX648393|COL4A2|1284|collagen, type IV, alpha 2##AK025912|COL4A2|1284|collagen, type IV, alpha 2##M24766|COL4A2|1284|collagen, type IV, alpha 2	0.0	
chr15	52311263	52311375	reg1043198.p1	3.488	+	TSC_hg19_v1_chr15_-_52263976 BC018147 NM_138792 AK055762 AK297972 AY302186	-47357	-	TSC_hg19_v1_chr15_+_52201590 AK025704	-109709	+	TSC_hg19_v1_chr15_+_52121876 BX647277 AF177171 BC020542	-189300	+	TSC_hg19_v1_chr15_+_52311425 NM_002748	100	+	TSC_hg19_v1_chr15_+_52311432 CR749401	115	+	TSC_hg19_v1_chr15_+_52311442 BC035492	142	+	BC018147|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##NM_138792|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK055762|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK297972|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AY302186|LEO1|123169|Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)##AK025704|TMOD3|29766|tropomodulin 3 (ubiquitous)##BX647277|TMOD3|29766|tropomodulin 3 (ubiquitous)##AF177171|TMOD3|29766|tropomodulin 3 (ubiquitous)##BC020542|TMOD3|29766|tropomodulin 3 (ubiquitous)##NM_002748|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##BC035492|MAPK6|5597|mitogen-activated protein kinase 6	0.0	
chr18	13832266	13832371	reg1035021.p1	3.488	+	BC095531 NM_005913	-6776	+	TSC_hg19_v1_chr18_+_13726671 AK296370 BC017816 BX647977 AK303842 BC005290 AK292561 AB007858 AF067791 NM_003799 AB020966 BC036798	-105628	+	TSC_hg19_v1_chr18_-_13726582 AK309506 NM_001098801 NM_152352	-105732	-	AK315319 BC094710 NM_000529 AK289381	83218	-	BC010705 AK096748 BC024227 BC037787 NM_145287	300139	-	TSC_hg19_v1_chr18_+_14179298 BC127726	346991	+	BC095531|MC5R|4161|melanocortin 5 receptor##NM_005913|MC5R|4161|melanocortin 5 receptor##AK296370|RNMT|8731|RNA (guanine-7-) methyltransferase##BC017816|RNMT|8731|RNA (guanine-7-) methyltransferase##BX647977|RNMT|8731|RNA (guanine-7-) methyltransferase##AK303842|RNMT|8731|RNA (guanine-7-) methyltransferase##BC005290|RNMT|8731|RNA (guanine-7-) methyltransferase##AK292561|RNMT|8731|RNA (guanine-7-) methyltransferase##AB007858|RNMT|8731|RNA (guanine-7-) methyltransferase##AF067791|RNMT|8731|RNA (guanine-7-) methyltransferase##NM_003799|RNMT|8731|RNA (guanine-7-) methyltransferase##AB020966|RNMT|8731|RNA (guanine-7-) methyltransferase##BC036798|RNMT|8731|RNA (guanine-7-) methyltransferase##AK309506|FAM210A|125228|family with sequence similarity 210, member A##NM_001098801|FAM210A|125228|family with sequence similarity 210, member A##NM_152352|FAM210A|125228|family with sequence similarity 210, member A##AK315319|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC094710|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##NM_000529|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##AK289381|MC2R|4158|melanocortin 2 receptor (adrenocorticotropic hormone)##BC010705|ZNF519|162655|zinc finger protein 519##AK096748|ZNF519|162655|zinc finger protein 519##BC024227|ZNF519|162655|zinc finger protein 519##BC037787|ZNF519|162655|zinc finger protein 519##NM_145287|ZNF519|162655|zinc finger protein 519##BC127726|ANKRD20A5P|440482|ankyrin repeat domain 20 family, member A5, pseudogene	0.998512	CTCF.p2:-10:0.999
chr19	53046369	53046528	reg1040180.p1	3.488	+	CR749856 TSC_hg19_v1_chr19_+_53030941 NM_001039886	-15519	+	AB091373 AB091374 AK299106 NM_001099694 TSC_hg19_v1_chr19_+_52956836 AL833487 AB091376 AB091375	-89621	+	AB086839 AB086840 AB091368 AB091369 NM_001143938 NM_001143939	-111782	+	TSC_hg19_v1_chr19_+_53073539 NM_018260 AK001753 BC131719 BC136425 BC136426 BC054884 BC080612	27094	+	BC067346 NM_001172655	27468	+	TSC_hg19_v1_chr19_-_53141603 BC032867 AK027518 NM_001105549 NM_001105550 NM_001105551 NM_001105552 NM_001105553 NM_001105554 NM_018300	95176	-	CR749856|ZNF808|388558|zinc finger protein 808##NM_001039886|ZNF808|388558|zinc finger protein 808##AB091373|ZNF578|147660|zinc finger protein 578##AB091374|ZNF578|147660|zinc finger protein 578##AK299106|ZNF578|147660|zinc finger protein 578##NM_001099694|ZNF578|147660|zinc finger protein 578##AB091376|ZNF578|147660|zinc finger protein 578##AB091375|ZNF578|147660|zinc finger protein 578##AB086839|ZNF534|147658|zinc finger protein 534##AB086840|ZNF534|147658|zinc finger protein 534##NM_001143938|ZNF534|147658|zinc finger protein 534##NM_001143939|ZNF534|147658|zinc finger protein 534##NM_018260|ZNF701|55762|zinc finger protein 701##AK001753|ZNF701|55762|zinc finger protein 701##BC131719|ZNF701|55762|zinc finger protein 701##BC136425|ZNF701|55762|zinc finger protein 701##BC136426|ZNF701|55762|zinc finger protein 701##BC054884|ZNF701|55762|zinc finger protein 701##BC080612|ZNF701|55762|zinc finger protein 701##BC067346|ZNF701|55762|zinc finger protein 701##NM_001172655|ZNF701|55762|zinc finger protein 701##BC032867|ZNF83|55769|zinc finger protein 83##AK027518|ZNF83|55769|zinc finger protein 83##NM_001105549|ZNF83|55769|zinc finger protein 83##NM_001105550|ZNF83|55769|zinc finger protein 83##NM_001105551|ZNF83|55769|zinc finger protein 83##NM_001105552|ZNF83|55769|zinc finger protein 83##NM_001105553|ZNF83|55769|zinc finger protein 83##NM_001105554|ZNF83|55769|zinc finger protein 83##NM_018300|ZNF83|55769|zinc finger protein 83	0.018179	
chr19	58095319	58095420	reg1038456.p2	3.488	+	TSC_hg19_v1_chr19_-_58090280 AK000564	-5088	-	CU674052 EU446818 TSC_hg19_v1_chr19_-_58090246 BC000130 NM_017879	-5211	-	AB590451 EU831944 EU832039 TSC_hg19_v1_chr19_-_58071232 BC053858 BC034810 BX538032 AK312802 AK122867	-24226	-	AK128340 TSC_hg19_v1_chr19_+_58095512 AK092538 AX747588 BC103957 BC103958 BC103959 NM_001010879	198	+	TSC_hg19_v1_chr19_+_58111252 AL832740 BC060865 NM_020880 AK096831	15901	+	TSC_hg19_v1_chr19_+_58125609 AK291763 BC053511 BC042636 BC011646	30251	+	AK000564|ZNF416|55659|zinc finger protein 416##EU446818|ZNF416|55659|zinc finger protein 416##BC000130|ZNF416|55659|zinc finger protein 416##NM_017879|ZNF416|55659|zinc finger protein 416##EU831944|ZNF550|162972|zinc finger protein 550##EU832039|ZNF550|162972|zinc finger protein 550##BC053858|ZNF550|162972|zinc finger protein 550##BC034810|ZNF550|162972|zinc finger protein 550##BX538032|ZNF550|162972|zinc finger protein 550##AK312802|ZNF550|162972|zinc finger protein 550##AK122867|ZNF550|162972|zinc finger protein 550##AK128340|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##AK092538|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##BC103957|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##BC103958|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##BC103959|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##NM_001010879|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##AL832740|ZNF530|348327|zinc finger protein 530##BC060865|ZNF530|348327|zinc finger protein 530##NM_020880|ZNF530|348327|zinc finger protein 530##AK096831|ZNF530|348327|zinc finger protein 530##AK291763|ZNF134|7693|zinc finger protein 134##BC042636|ZNF134|7693|zinc finger protein 134##BC011646|ZNF134|7693|zinc finger protein 134	0.0	
chr2	225787098	225787205	reg1036027.p1	3.488	+	TSC_hg19_v1_chr2_-_225450116 NM_003590	-337031	-	TSC_hg19_v1_chr2_-_225450056 BC039598	-337076	-	TSC_hg19_v1_chr2_-_225450043 AB014517 BC092409	-337110	-	TSC_hg19_v1_chr2_-_225811768 EU236710	24603	-	TSC_hg19_v1_chr2_-_225907373 AB014594 NM_014689	120197	-	NM_020864 BC131727 AB040919	478494	+	NM_003590|CUL3|8452|cullin 3##BC039598|CUL3|8452|cullin 3##AB014517|CUL3|8452|cullin 3##BC092409|CUL3|8452|cullin 3##EU236710|DOCK10|55619|dedicator of cytokinesis 10##AB014594|DOCK10|55619|dedicator of cytokinesis 10##NM_014689|DOCK10|55619|dedicator of cytokinesis 10##NM_020864|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##BC131727|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2##AB040919|NYAP2|57624|neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2	0.0	
chr3	112533273	112533377	reg1041147.p1	3.488	+	AY548106 AY548107 TSC_hg19_v1_chr3_-_112359991 BC110842 AY526612 NM_199511 NM_199512 AK304561	-173348	-	BX647117 TSC_hg19_v1_chr3_-_112359888 BC116178 BC116179 AY333429 AF506819	-173442	-	TSC_hg19_v1_chr3_-_112359660 AK292881	-173659	-	BC144504 BC144507 AY284976 AY552790 NM_001008784 NM_001199215	31467	-	AF283760 BC069661 BC069721 BC069743 AF495380 AF497548 AF497549 AF497550 BC093890 BC143393 AK304426 AK293071 AY284975 AK126349 NM_138806 NM_138939 NM_138940 NM_170780 AY358910	160510	-	TSC_hg19_v1_chr3_+_112709777 AK292651	176453	+	AY548106|CCDC80|151887|coiled-coil domain containing 80##AY548107|CCDC80|151887|coiled-coil domain containing 80##BC110842|CCDC80|151887|coiled-coil domain containing 80##AY526612|CCDC80|151887|coiled-coil domain containing 80##NM_199511|CCDC80|151887|coiled-coil domain containing 80##NM_199512|CCDC80|151887|coiled-coil domain containing 80##AK304561|CCDC80|151887|coiled-coil domain containing 80##BX647117|CCDC80|151887|coiled-coil domain containing 80##BC116178|CCDC80|151887|coiled-coil domain containing 80##BC116179|CCDC80|151887|coiled-coil domain containing 80##AY333429|CCDC80|151887|coiled-coil domain containing 80##AF506819|CCDC80|151887|coiled-coil domain containing 80##AK292881|CCDC80|151887|coiled-coil domain containing 80##BC144504|CD200R1L|344807|CD200 receptor 1-like##BC144507|CD200R1L|344807|CD200 receptor 1-like##AY284976|CD200R1L|344807|CD200 receptor 1-like##AY552790|CD200R1L|344807|CD200 receptor 1-like##NM_001008784|CD200R1L|344807|CD200 receptor 1-like##NM_001199215|CD200R1L|344807|CD200 receptor 1-like##AF283760|CD200R1|131450|CD200 receptor 1##BC069661|CD200R1|131450|CD200 receptor 1##BC069721|CD200R1|131450|CD200 receptor 1##BC069743|CD200R1|131450|CD200 receptor 1##AF495380|CD200R1|131450|CD200 receptor 1##AF497548|CD200R1|131450|CD200 receptor 1##AF497549|CD200R1|131450|CD200 receptor 1##AF497550|CD200R1|131450|CD200 receptor 1##BC093890|CD200R1|131450|CD200 receptor 1##BC143393|CD200R1|131450|CD200 receptor 1##AK304426|CD200R1|131450|CD200 receptor 1##AK293071|CD200R1|131450|CD200 receptor 1##AY284975|CD200R1|131450|CD200 receptor 1##AK126349|CD200R1|131450|CD200 receptor 1##NM_138806|CD200R1|131450|CD200 receptor 1##NM_138939|CD200R1|131450|CD200 receptor 1##NM_138940|CD200R1|131450|CD200 receptor 1##NM_170780|CD200R1|131450|CD200 receptor 1##AY358910|CD200R1|131450|CD200 receptor 1##AK292651|GTPBP8|29083|GTP-binding protein 8 (putative)	0.723455	CTCF.p2:-17:0.723
chr3	122329006	122329144	reg1034451.p2	3.488	+	TSC_hg19_v1_chr3_+_122296496 AK309863 NM_001113523 BX647656 DQ063586	-32595	+	AF307338 AF307339 TSC_hg19_v1_chr3_-_122283426 NM_001146103 NM_031458	-45603	-	AY225123 TSC_hg19_v1_chr3_+_122283217 AK125086 NM_138287 BC060509 AL833598 BC042191 CU692078 AF484416 AY780792	-45869	+	BC101701 BC101703 BC143573 AK097916 NM_152615	5417	+	TSC_hg19_v1_chr3_+_122399703 NM_017554 AK304269	70623	+	CU680100 CU687786 DQ893066 DQ896319 AB590214 AK096705 BC063629 TSC_hg19_v1_chr3_-_122512667 AF400663 BC011897 AK289410 NM_024610	183528	-	NM_001113523|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BX647656|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##DQ063586|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##AF307338|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##AF307339|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_001146103|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##NM_031458|PARP9|83666|poly (ADP-ribose) polymerase family, member 9##AY225123|DTX3L|151636|deltex 3-like (Drosophila)##AK125086|DTX3L|151636|deltex 3-like (Drosophila)##NM_138287|DTX3L|151636|deltex 3-like (Drosophila)##BC060509|DTX3L|151636|deltex 3-like (Drosophila)##AL833598|DTX3L|151636|deltex 3-like (Drosophila)##BC042191|DTX3L|151636|deltex 3-like (Drosophila)##AF484416|DTX3L|151636|deltex 3-like (Drosophila)##AY780792|DTX3L|151636|deltex 3-like (Drosophila)##BC101701|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BC101703|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##BC143573|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##AK097916|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##NM_152615|PARP15|165631|poly (ADP-ribose) polymerase family, member 15##NM_017554|PARP14|54625|poly (ADP-ribose) polymerase family, member 14##AK304269|PARP14|54625|poly (ADP-ribose) polymerase family, member 14##DQ893066|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##DQ896319|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK096705|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC063629|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AF400663|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##BC011897|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##AK289410|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1##NM_024610|HSPBAP1|79663|HSPB (heat shock 27kDa) associated protein 1	0.0	
chr6	101629701	101629800	reg1046878.p1	3.488	+	TSC_hg19_v1_chr6_-_101329241 BC026066 AK299117	-300507	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	-300534	-	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	-300650	-	HM149340 TSC_hg19_v1_chr6_+_101841583	211756	+	BC037954 TSC_hg19_v1_chr6_+_101846686	216927	+	NM_001166247 NM_021956 NM_175768 AK291965 AK289542 BC063814	217155	+	BC026066|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK299117|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC037954|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_001166247|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_021956|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##NM_175768|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK291965|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##AK289542|GRIK2|2898|glutamate receptor, ionotropic, kainate 2##BC063814|GRIK2|2898|glutamate receptor, ionotropic, kainate 2	0.375199	CTCF.p2:-43:0.375
chr6	36043613	36043746	reg1031569.p2	3.488	+	TSC_hg19_v1_chr6_+_35995587 BC000092 BC031574 L35264	-48023	+	AK303414 TSC_hg19_v1_chr6_+_35995584	-48096	+	TSC_hg19_v1_chr6_+_35995536 AK291709 L35263	-48134	+	NM_002754 TSC_hg19_v1_chr6_+_36098292 AK308018 BC085196 AF004709 BC000433 BC001641 BC004428 Y10488 AF092535 U93232 AF100546 AB451221 AB451344 AB463892 BT007221 CR536490 CR541687 DQ891372 DQ894551 EU832156 EU832250 AK222922	54635	+	TSC_hg19_v1_chr6_+_36164569 AB033112 NM_015695	120881	+	TSC_hg19_v1_chr6_-_36164979 BC042825	121305	-	BC000092|MAPK14|1432|mitogen-activated protein kinase 14##BC031574|MAPK14|1432|mitogen-activated protein kinase 14##L35264|MAPK14|1432|mitogen-activated protein kinase 14##AK303414|MAPK14|1432|mitogen-activated protein kinase 14##AK291709|MAPK14|1432|mitogen-activated protein kinase 14##L35263|MAPK14|1432|mitogen-activated protein kinase 14##NM_002754|MAPK13|5603|mitogen-activated protein kinase 13##AK308018|MAPK13|5603|mitogen-activated protein kinase 13##BC085196|MAPK13|5603|mitogen-activated protein kinase 13##AF004709|MAPK13|5603|mitogen-activated protein kinase 13##BC000433|MAPK13|5603|mitogen-activated protein kinase 13##BC001641|MAPK13|5603|mitogen-activated protein kinase 13##BC004428|MAPK13|5603|mitogen-activated protein kinase 13##Y10488|MAPK13|5603|mitogen-activated protein kinase 13##AF092535|MAPK13|5603|mitogen-activated protein kinase 13##U93232|MAPK13|5603|mitogen-activated protein kinase 13##AF100546|MAPK13|5603|mitogen-activated protein kinase 13##AB451221|MAPK13|5603|mitogen-activated protein kinase 13##AB451344|MAPK13|5603|mitogen-activated protein kinase 13##BT007221|MAPK13|5603|mitogen-activated protein kinase 13##CR536490|MAPK13|5603|mitogen-activated protein kinase 13##CR541687|MAPK13|5603|mitogen-activated protein kinase 13##DQ891372|MAPK13|5603|mitogen-activated protein kinase 13##DQ894551|MAPK13|5603|mitogen-activated protein kinase 13##EU832156|MAPK13|5603|mitogen-activated protein kinase 13##EU832250|MAPK13|5603|mitogen-activated protein kinase 13##AK222922|MAPK13|5603|mitogen-activated protein kinase 13##AB033112|BRPF3|27154|bromodomain and PHD finger containing, 3##NM_015695|BRPF3|27154|bromodomain and PHD finger containing, 3	0.993388	CTCF.p2:6:0.993
chr8	69095744	69095874	reg1033929.p1	3.488	+	AK294299 TSC_hg19_v1_chr8_+_68864738	-231079	+	TSC_hg19_v1_chr8_+_68864614 AY570973	-231176	+	TSC_hg19_v1_chr8_+_68864598 AY508996 AY508997 NM_024870 NM_025170	-231214	+	BC041961 NM_001195639 NM_052958	147147	+	AK095341 NM_001128204 NM_015170 TSC_hg19_v1_chr8_+_70378858 AF545571	1283056	+	TSC_hg19_v1_chr8_+_70379077 AK307951	1283271	+	AK294299|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY570973|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY508996|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##AY508997|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##NM_024870|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##NM_025170|PREX2|80243|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2##BC041961|C8orf34|116328|chromosome 8 open reading frame 34##NM_001195639|C8orf34|116328|chromosome 8 open reading frame 34##NM_052958|C8orf34|116328|chromosome 8 open reading frame 34##AK095341|SULF1|23213|sulfatase 1##NM_001128204|SULF1|23213|sulfatase 1##NM_015170|SULF1|23213|sulfatase 1##AF545571|SULF1|23213|sulfatase 1##AK307951|SULF1|23213|sulfatase 1	0.773115	CTCF.p2:-9:0.773
chr10	105726460	105726556	reg1035631.p1	3.487	+	TSC_hg19_v1_chr10_-_105677986 NM_024928	-48493	-	TSC_hg19_v1_chr10_-_105677943 BC017400	-48579	-	TSC_hg19_v1_chr10_-_105615306 NM_014631	-111238	-	TSC_hg19_v1_chr10_+_105726926 AK307389	378	+	TSC_hg19_v1_chr10_+_105726941 BC047885 BC064804 BC047762 BC036736 D86959	456	+	AF273048 NM_014720 BC111565 BC008697	979	+	NM_024928|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1##BC017400|OBFC1|79991|oligonucleotide/oligosaccharide-binding fold containing 1##NM_014631|SH3PXD2A|9644|SH3 and PX domains 2A##AK307389|SLK|9748|STE20-like kinase##BC047885|SLK|9748|STE20-like kinase##BC064804|SLK|9748|STE20-like kinase##BC047762|SLK|9748|STE20-like kinase##BC036736|SLK|9748|STE20-like kinase##D86959|SLK|9748|STE20-like kinase##AF273048|SLK|9748|STE20-like kinase##NM_014720|SLK|9748|STE20-like kinase##BC111565|SLK|9748|STE20-like kinase##BC008697|SLK|9748|STE20-like kinase	0.0	
chr10	94983922	94984102	reg1022654.p1	3.487	+	AK075374 NM_000783 AF005418	-150356	+	AK027560 NM_057157	-150781	+	AY356349 NM_183374	-162992	+	TSC_hg19_v1_chr10_-_95242092 AB033033 AF207990 AB384582 AF182316 BC052617 BC040110 NM_013451 NM_133337	258036	-	TSC_hg19_v1_chr10_+_95256395 NM_001127182 AY788918 NM_018131 AK315536 BX640718 AK223495 AB091343 BC008947	272376	+	TSC_hg19_v1_chr10_+_95326409 NM_001195755 NM_181745 AK301525 AB115768 AY288417 BC101175 AY255573	342497	+	AK075374|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_000783|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AF005418|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AK027560|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##NM_057157|CYP26A1|1592|cytochrome P450, family 26, subfamily A, polypeptide 1##AY356349|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##NM_183374|CYP26C1|340665|cytochrome P450, family 26, subfamily C, polypeptide 1##AB033033|MYOF|26509|myoferlin##AF207990|MYOF|26509|myoferlin##AF182316|MYOF|26509|myoferlin##BC052617|MYOF|26509|myoferlin##BC040110|MYOF|26509|myoferlin##NM_013451|MYOF|26509|myoferlin##NM_133337|MYOF|26509|myoferlin##NM_001127182|CEP55|55165|centrosomal protein 55kDa##AY788918|CEP55|55165|centrosomal protein 55kDa##NM_018131|CEP55|55165|centrosomal protein 55kDa##AK315536|CEP55|55165|centrosomal protein 55kDa##BX640718|CEP55|55165|centrosomal protein 55kDa##AK223495|CEP55|55165|centrosomal protein 55kDa##AB091343|CEP55|55165|centrosomal protein 55kDa##BC008947|CEP55|55165|centrosomal protein 55kDa##NM_001195755|O3FAR1|338557|omega-3 fatty acid receptor 1##NM_181745|O3FAR1|338557|omega-3 fatty acid receptor 1##AK301525|O3FAR1|338557|omega-3 fatty acid receptor 1##AB115768|O3FAR1|338557|omega-3 fatty acid receptor 1##AY288417|O3FAR1|338557|omega-3 fatty acid receptor 1##BC101175|O3FAR1|338557|omega-3 fatty acid receptor 1##AY255573|O3FAR1|338557|omega-3 fatty acid receptor 1	0.950004	CTCF.p2:-63:0.950
chr1	16276077	16276195	reg1037134.p2	3.487	+	TSC_hg19_v1_chr1_+_16259065 BC172907	-17025	+	AF356524 NM_015001 TSC_hg19_v1_chr1_+_16174380	-101757	+	TSC_hg19_v1_chr1_-_16162350 AK094772	-113780	-	TSC_hg19_v1_chr1_-_16302597 BC126163 BC143965 BC143968 Y09723 AK302610 AK301896 AK309081 AK311083 AK315201 AK303823 AK299820 AK223618 AK294796 NM_001242884 NM_003443	26334	-	AK127425 BC017946 NM_178840 CU676116	54627	+	TSC_hg19_v1_chr1_-_16344539 DQ892716 DQ895966 EU176383 EU831930 EU832025 AL832181 AF155908 AJ243191 CR749298 BX537990 AK075151 AK095911 CR749419	68377	-	AF356524|SPEN|23013|spen homolog, transcriptional regulator (Drosophila)##NM_015001|SPEN|23013|spen homolog, transcriptional regulator (Drosophila)##AK094772|FLJ37453|729614|uncharacterized LOC729614##BC126163|ZBTB17|7709|zinc finger and BTB domain containing 17##BC143965|ZBTB17|7709|zinc finger and BTB domain containing 17##BC143968|ZBTB17|7709|zinc finger and BTB domain containing 17##Y09723|ZBTB17|7709|zinc finger and BTB domain containing 17##AK302610|ZBTB17|7709|zinc finger and BTB domain containing 17##AK301896|ZBTB17|7709|zinc finger and BTB domain containing 17##AK309081|ZBTB17|7709|zinc finger and BTB domain containing 17##AK311083|ZBTB17|7709|zinc finger and BTB domain containing 17##AK315201|ZBTB17|7709|zinc finger and BTB domain containing 17##AK303823|ZBTB17|7709|zinc finger and BTB domain containing 17##AK299820|ZBTB17|7709|zinc finger and BTB domain containing 17##AK223618|ZBTB17|7709|zinc finger and BTB domain containing 17##AK294796|ZBTB17|7709|zinc finger and BTB domain containing 17##NM_001242884|ZBTB17|7709|zinc finger and BTB domain containing 17##NM_003443|ZBTB17|7709|zinc finger and BTB domain containing 17##AK127425|C1orf64|149563|chromosome 1 open reading frame 64##BC017946|C1orf64|149563|chromosome 1 open reading frame 64##NM_178840|C1orf64|149563|chromosome 1 open reading frame 64##DQ892716|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##DQ895966|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU176383|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU831930|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##EU832025|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AL832181|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AF155908|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AJ243191|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##CR749298|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##BX537990|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK075151|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##AK095911|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)##CR749419|HSPB7|27129|heat shock 27kDa protein family, member 7 (cardiovascular)	0.0	
chr1	24969409	24969475	reg1046977.p2	3.487	+	TSC_hg19_v1_chr1_+_24882611 NM_001010980 AK124519	-86843	+	HQ317426 JN203053 NM_001251980 NM_001251982 NM_001251985 EF467309 EF431960 EF529733 AF176116 TSC_hg19_v1_chr1_+_24840858 AY906854 DQ892434 DQ895645 AF176117	-128583	+	HQ317423 HQ317445 HQ317446 NM_001251978	-135359	+	AF419855 NM_005839 TSC_hg19_v1_chr1_+_24969669	191	+	TSC_hg19_v1_chr1_+_24969763 BC011019 BC036187	296	+	TSC_hg19_v1_chr1_+_24969792 AK302498	337	+	NM_001010980|C1orf130|400746|chromosome 1 open reading frame 130##AK124519|C1orf130|400746|chromosome 1 open reading frame 130##HQ317426|RCAN3|11123|RCAN family member 3##JN203053|RCAN3|11123|RCAN family member 3##NM_001251980|RCAN3|11123|RCAN family member 3##NM_001251982|RCAN3|11123|RCAN family member 3##NM_001251985|RCAN3|11123|RCAN family member 3##EF467309|RCAN3|11123|RCAN family member 3##EF431960|RCAN3|11123|RCAN family member 3##EF529733|RCAN3|11123|RCAN family member 3##AF176116|RCAN3|11123|RCAN family member 3##AY906854|RCAN3|11123|RCAN family member 3##DQ892434|RCAN3|11123|RCAN family member 3##DQ895645|RCAN3|11123|RCAN family member 3##AF176117|RCAN3|11123|RCAN family member 3##HQ317423|RCAN3|11123|RCAN family member 3##NM_001251978|RCAN3|11123|RCAN family member 3##AF419855|SRRM1|10250|serine/arginine repetitive matrix 1##NM_005839|SRRM1|10250|serine/arginine repetitive matrix 1##BC011019|SRRM1|10250|serine/arginine repetitive matrix 1##BC036187|SRRM1|10250|serine/arginine repetitive matrix 1##AK302498|SRRM1|10250|serine/arginine repetitive matrix 1	0.0	
chr14	57649648	57649751	reg1036535.p2	3.487	+	AK314271 BC032579 NM_021728 AB593058	-372555	-	NM_172337 AB593056	-377336	-	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	-603154	+	CU691962 TSC_hg19_v1_chr14_-_57735388	85694	-	TSC_hg19_v1_chr14_-_57735546 U85946 AK295085 AK303531	85841	-	TSC_hg19_v1_chr14_-_57735559 BC041126 BC031298	85881	-	AK314271|OTX2|5015|orthodenticle homeobox 2##BC032579|OTX2|5015|orthodenticle homeobox 2##NM_021728|OTX2|5015|orthodenticle homeobox 2##AB593058|OTX2|5015|orthodenticle homeobox 2##NM_172337|OTX2|5015|orthodenticle homeobox 2##AB593056|OTX2|5015|orthodenticle homeobox 2##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101##U85946|EXOC5|10640|exocyst complex component 5##AK295085|EXOC5|10640|exocyst complex component 5##AK303531|EXOC5|10640|exocyst complex component 5##BC041126|EXOC5|10640|exocyst complex component 5##BC031298|EXOC5|10640|exocyst complex component 5	0.0	
chr17	1477606	1477786	reg1001368.p1	3.487	+	BC082976 TSC_hg19_v1_chr17_-_1466077 BC027177 D30036 M73704 BC045108 BC068538 NM_006224	-11614	-	TSC_hg19_v1_chr17_-_1420177 AK312844 NM_001135642 NM_016532 NM_130766	-57517	-	TSC_hg19_v1_chr17_-_1419907 DQ892815 DQ896061 AB529166 AK297955 AK303907 AK307293 AB036829 AB036830 AK312585 BC004362	-57730	-	AF289592 TSC_hg19_v1_chr17_-_1531711 AB120364	53944	-	TSC_hg19_v1_chr17_-_1532115 BC027923 NM_152346 BC071859	54448	-	D63483 AK310174 AB052950 AB052949 AB052947 D86864 TSC_hg19_v1_chr17_-_1549050 AK291810 AB052948 BC039735 NM_003693 NM_145350 NM_145352 AK298737	71341	-	BC082976|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC027177|PITPNA|5306|phosphatidylinositol transfer protein, alpha##D30036|PITPNA|5306|phosphatidylinositol transfer protein, alpha##M73704|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC045108|PITPNA|5306|phosphatidylinositol transfer protein, alpha##BC068538|PITPNA|5306|phosphatidylinositol transfer protein, alpha##NM_006224|PITPNA|5306|phosphatidylinositol transfer protein, alpha##AK312844|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_001135642|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_016532|INPP5K|51763|inositol polyphosphate-5-phosphatase K##NM_130766|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ892815|INPP5K|51763|inositol polyphosphate-5-phosphatase K##DQ896061|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK297955|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK303907|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK307293|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036829|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AB036830|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AK312585|INPP5K|51763|inositol polyphosphate-5-phosphatase K##BC004362|INPP5K|51763|inositol polyphosphate-5-phosphatase K##AF289592|SLC43A2|124935|solute carrier family 43, member 2##AB120364|SLC43A2|124935|solute carrier family 43, member 2##BC027923|SLC43A2|124935|solute carrier family 43, member 2##NM_152346|SLC43A2|124935|solute carrier family 43, member 2##BC071859|SLC43A2|124935|solute carrier family 43, member 2##D63483|SCARF1|8578|scavenger receptor class F, member 1##AK310174|SCARF1|8578|scavenger receptor class F, member 1##AB052950|SCARF1|8578|scavenger receptor class F, member 1##AB052949|SCARF1|8578|scavenger receptor class F, member 1##AB052947|SCARF1|8578|scavenger receptor class F, member 1##D86864|SCARF1|8578|scavenger receptor class F, member 1##AK291810|SCARF1|8578|scavenger receptor class F, member 1##AB052948|SCARF1|8578|scavenger receptor class F, member 1##BC039735|SCARF1|8578|scavenger receptor class F, member 1##NM_003693|SCARF1|8578|scavenger receptor class F, member 1##NM_145350|SCARF1|8578|scavenger receptor class F, member 1##NM_145352|SCARF1|8578|scavenger receptor class F, member 1##AK298737|SCARF1|8578|scavenger receptor class F, member 1	0.0	
chr17	40075142	40075266	reg1040589.p1	3.487	+	TSC_hg19_v1_chr17_-_40075180 U18197	-35	-	TSC_hg19_v1_chr17_-_40021630 AK001434 NM_018143 BC034470 AK301952	-53546	-	NM_152467 BC067753 AY495339 AK301797 AK302141 AK057224	-81143	+	TSC_hg19_v1_chr17_-_40075205 X64330 AB210035	5	-	TSC_hg19_v1_chr17_-_40075237 AK304802	29	-	TSC_hg19_v1_chr17_-_40075239 BC006195 NM_001096 NM_198830 AK295675 AK312315	61	-	U18197|ACLY|47|ATP citrate lyase##AK001434|KLHL11|55175|kelch-like 11 (Drosophila)##NM_018143|KLHL11|55175|kelch-like 11 (Drosophila)##BC034470|KLHL11|55175|kelch-like 11 (Drosophila)##AK301952|KLHL11|55175|kelch-like 11 (Drosophila)##NM_152467|KLHL10|317719|kelch-like 10 (Drosophila)##BC067753|KLHL10|317719|kelch-like 10 (Drosophila)##AY495339|KLHL10|317719|kelch-like 10 (Drosophila)##AK301797|KLHL10|317719|kelch-like 10 (Drosophila)##AK302141|KLHL10|317719|kelch-like 10 (Drosophila)##AK057224|KLHL10|317719|kelch-like 10 (Drosophila)##X64330|ACLY|47|ATP citrate lyase##AB210035|ACLY|47|ATP citrate lyase##AK304802|ACLY|47|ATP citrate lyase##BC006195|ACLY|47|ATP citrate lyase##NM_001096|ACLY|47|ATP citrate lyase##NM_198830|ACLY|47|ATP citrate lyase##AK295675|ACLY|47|ATP citrate lyase##AK312315|ACLY|47|ATP citrate lyase	0.0	
chr19	10209617	10209787	reg1004652.p1	3.487	+	TSC_hg19_v1_chr19_+_10197045 AL137694 CU690214	-12640	+	BC026180 TSC_hg19_v1_chr19_+_10197007 AK002148 BC010847 BC035817	-12705	+	TSC_hg19_v1_chr19_+_10196791 NM_018381	-12916	+	AY358276 BC142632 AB054064 NM_031917 AF230330	3698	-	BC171852 NM_001040664 NM_001198690 NM_020230 BC033202 TSC_hg19_v1_chr19_+_10217035 BC009833 AJ292529 CU679511 AJ300588	7287	+	NM_002566 BC073827	12502	+	AL137694|C19orf66|55337|chromosome 19 open reading frame 66##BC026180|C19orf66|55337|chromosome 19 open reading frame 66##AK002148|C19orf66|55337|chromosome 19 open reading frame 66##BC010847|C19orf66|55337|chromosome 19 open reading frame 66##BC035817|C19orf66|55337|chromosome 19 open reading frame 66##NM_018381|C19orf66|55337|chromosome 19 open reading frame 66##AY358276|ANGPTL6|83854|angiopoietin-like 6##BC142632|ANGPTL6|83854|angiopoietin-like 6##AB054064|ANGPTL6|83854|angiopoietin-like 6##NM_031917|ANGPTL6|83854|angiopoietin-like 6##AF230330|ANGPTL6|83854|angiopoietin-like 6##BC171852|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001040664|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_001198690|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_020230|PPAN|56342|peter pan homolog (Drosophila)##BC033202|PPAN|56342|peter pan homolog (Drosophila)##BC009833|PPAN|56342|peter pan homolog (Drosophila)##AJ292529|PPAN|56342|peter pan homolog (Drosophila)##AJ300588|PPAN-P2RY11|692312|PPAN-P2RY11 readthrough##NM_002566|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11##BC073827|P2RY11|5032|purinergic receptor P2Y, G-protein coupled, 11	0.0	
chr1	9242389	9242547	reg1012224.p4	3.487	+	DQ892804 DQ896051 TSC_hg19_v1_chr1_-_9189169 AK022194 AK292888 AK304154 AY768808 NM_024980 BC094733 BC018691	-53247	-	TSC_hg19_v1_chr1_-_9129695 M55531 AK290398 AK294368 NM_001135585 NM_003039	-112692	-	TSC_hg19_v1_chr1_-_9129644 AK289849 BC001692 BC001820 AK295785 BC035878	-112827	-	TSC_hg19_v1_chr1_+_9294832 BC081559	52347	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	52449	+	CR749282 TSC_hg19_v1_chr1_+_9299950	57470	+	DQ892804|GPR157|80045|G protein-coupled receptor 157##DQ896051|GPR157|80045|G protein-coupled receptor 157##AK022194|GPR157|80045|G protein-coupled receptor 157##AK292888|GPR157|80045|G protein-coupled receptor 157##AK304154|GPR157|80045|G protein-coupled receptor 157##AY768808|GPR157|80045|G protein-coupled receptor 157##NM_024980|GPR157|80045|G protein-coupled receptor 157##BC018691|GPR157|80045|G protein-coupled receptor 157##M55531|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK290398|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK294368|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_001135585|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_003039|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK289849|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001692|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001820|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK295785|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC035878|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##CR749282|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	0.127652	
chr20	200331	200420	reg1030963.p2	3.487	+	AF525930 NM_001037732 BC140936	-30083	-	AY358796 AF525929 BC069486 BC109395 BC110085 NM_139074	-62222	+	AK225987 AJ236910 BC069294 NM_030931 AB590889 AF525928 AY122478	-77123	+	BC070359 NM_080831 AY122480 AY358186 CU687092 HQ447599 AF525931 AF529413	7538	+	AY358708 EF426755 NM_207469 BC137292 BC137293 AF525932 AY621329	38022	+	TSC_hg19_v1_chr20_-_271080 AK091924 AX747257 AK304526 BX640715 BC051762	70699	-	AF525930|DEFB128|245939|defensin, beta 128##NM_001037732|DEFB128|245939|defensin, beta 128##BC140936|DEFB128|245939|defensin, beta 128##AY358796|DEFB127|140850|defensin, beta 127##AF525929|DEFB127|140850|defensin, beta 127##BC069486|DEFB127|140850|defensin, beta 127##BC109395|DEFB127|140850|defensin, beta 127##BC110085|DEFB127|140850|defensin, beta 127##NM_139074|DEFB127|140850|defensin, beta 127##AK225987|DEFB126|81623|defensin, beta 126##AJ236910|DEFB126|81623|defensin, beta 126##BC069294|DEFB126|81623|defensin, beta 126##NM_030931|DEFB126|81623|defensin, beta 126##AF525928|DEFB126|81623|defensin, beta 126##AY122478|DEFB126|81623|defensin, beta 126##BC070359|DEFB129|140881|defensin, beta 129##NM_080831|DEFB129|140881|defensin, beta 129##AY122480|DEFB129|140881|defensin, beta 129##AY358186|DEFB129|140881|defensin, beta 129##HQ447599|DEFB129|140881|defensin, beta 129##AF525931|DEFB129|140881|defensin, beta 129##AF529413|DEFB129|140881|defensin, beta 129##AY358708|DEFB132|400830|defensin, beta 132##EF426755|DEFB132|400830|defensin, beta 132##NM_207469|DEFB132|400830|defensin, beta 132##BC137292|DEFB132|400830|defensin, beta 132##BC137293|DEFB132|400830|defensin, beta 132##AF525932|DEFB132|400830|defensin, beta 132##AY621329|DEFB132|400830|defensin, beta 132##AK091924|C20orf96|140680|chromosome 20 open reading frame 96##AK304526|C20orf96|140680|chromosome 20 open reading frame 96##BX640715|C20orf96|140680|chromosome 20 open reading frame 96##BC051762|C20orf96|140680|chromosome 20 open reading frame 96	0.253818	CTCF.p2:-3:0.254
chr2	206461456	206461550	reg1035971.p1	3.487	+	TSC_hg19_v1_chr2_+_205410716 AB073472 AB092439 AF428250 AF428251 AF466152	-1050784	+	TSC_hg19_v1_chr2_+_205410560 AX765687 AX765741 AK056157	-1050909	+	TSC_hg19_v1_chr2_+_205410465 AB053321 NM_057177 NM_152526 NM_205863	-1051013	+	TSC_hg19_v1_chr2_+_206547224 AK130198 AL833606 NM_003872 NM_018534 NM_201264 NM_201266 NM_201267 NM_201279 BX537423	85675	+	TSC_hg19_v1_chr2_+_206547371 AK290934	85858	+	TSC_hg19_v1_chr2_-_206950902 AK096585 NM_017759	489408	-	AB073472|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB092439|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428250|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF428251|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AF466152|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK056157|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AB053321|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_057177|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_152526|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##NM_205863|PARD3B|117583|par-3 partitioning defective 3 homolog B (C. elegans)##AK130198|NRP2|8828|neuropilin 2##AL833606|NRP2|8828|neuropilin 2##NM_003872|NRP2|8828|neuropilin 2##NM_018534|NRP2|8828|neuropilin 2##NM_201264|NRP2|8828|neuropilin 2##NM_201266|NRP2|8828|neuropilin 2##NM_201267|NRP2|8828|neuropilin 2##NM_201279|NRP2|8828|neuropilin 2##BX537423|NRP2|8828|neuropilin 2##AK290934|NRP2|8828|neuropilin 2##AK096585|INO80D|54891|INO80 complex subunit D##NM_017759|INO80D|54891|INO80 complex subunit D	0.339661	CTCF.p2:-12:0.340
chr5	159378471	159378612	reg1039666.p1	3.487	+	NM_000679 U03865 BC136568 BC136569 AK309989 L31773	-34716	+	BC074723 M65272 NM_002187	-621067	-	TSC_hg19_v1_chr5_+_158690297 AY444562 AK057996 BC013425	-688255	+	TSC_hg19_v1_chr5_+_159436145 AK315262	57606	+	AK222641 TSC_hg19_v1_chr5_+_159436161 AK222984 NM_003314 U46570	57626	+	TSC_hg19_v1_chr5_-_159546405 AB067522 BC035076 BC105110 BC143437 NM_001130864 NM_052927	167918	-	NM_000679|ADRA1B|147|adrenergic, alpha-1B-, receptor##U03865|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136568|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC136569|ADRA1B|147|adrenergic, alpha-1B-, receptor##L31773|ADRA1B|147|adrenergic, alpha-1B-, receptor##BC074723|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##M65272|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##NM_002187|IL12B|3593|interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)##AY444562|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK057996|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##BC013425|UBLCP1|134510|ubiquitin-like domain containing CTD phosphatase 1##AK315262|TTC1|7265|tetratricopeptide repeat domain 1##AK222641|TTC1|7265|tetratricopeptide repeat domain 1##AK222984|TTC1|7265|tetratricopeptide repeat domain 1##NM_003314|TTC1|7265|tetratricopeptide repeat domain 1##U46570|TTC1|7265|tetratricopeptide repeat domain 1##AB067522|PWWP2A|114825|PWWP domain containing 2A##BC035076|PWWP2A|114825|PWWP domain containing 2A##BC105110|PWWP2A|114825|PWWP domain containing 2A##BC143437|PWWP2A|114825|PWWP domain containing 2A##NM_001130864|PWWP2A|114825|PWWP domain containing 2A##NM_052927|PWWP2A|114825|PWWP domain containing 2A	0.0	
chr6	8708489	8708593	reg1022631.p2	3.487	+	TSC_hg19_v1_chr6_+_8435870 BC040612	-272653	+	BC006973 TSC_hg19_v1_chr6_-_8435751 BX647208 AK309222 AK304250 BX648022 AK303940 AK313522 BX538271 BX641086 NM_001142540 NM_001142541 NM_015948	-272833	-	AB011079 BT007306 CU675089 DQ893502 EU176776 TSC_hg19_v1_chr6_-_8102773 AF054186 BC005291 NM_001135650 NM_004280	-605751	-	BC017754 NM_001032280 TSC_hg19_v1_chr6_-_10412623	1704075	-	FJ794945 M61156 M36711 X52611 TSC_hg19_v1_chr6_-_10415305	1706734	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	1706927	-	BC040612|LOC100506207|100506207|uncharacterized LOC100506207##BC006973|SLC35B3|51000|solute carrier family 35, member B3##BX647208|SLC35B3|51000|solute carrier family 35, member B3##AK304250|SLC35B3|51000|solute carrier family 35, member B3##BX648022|SLC35B3|51000|solute carrier family 35, member B3##AK303940|SLC35B3|51000|solute carrier family 35, member B3##AK313522|SLC35B3|51000|solute carrier family 35, member B3##BX538271|SLC35B3|51000|solute carrier family 35, member B3##BX641086|SLC35B3|51000|solute carrier family 35, member B3##NM_001142540|SLC35B3|51000|solute carrier family 35, member B3##NM_001142541|SLC35B3|51000|solute carrier family 35, member B3##NM_015948|SLC35B3|51000|solute carrier family 35, member B3##AB011079|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BT007306|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##DQ893502|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##EU176776|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##AF054186|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC005291|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_001135650|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##NM_004280|EEF1E1|9521|eukaryotic translation elongation factor 1 epsilon 1##BC017754|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001032280|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##FJ794945|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M61156|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##M36711|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##X52611|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)	0.0	
chr7	119912541	119912641	reg1010483.p2	3.487	+	NM_019644 AK302407	-2047857	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-2088420	+	BC106000 TSC_hg19_v1_chr7_-_117513558 AF377960 NM_033427	-2399048	-	AK307139 AB028967 NM_012281	1113	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	585429	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	585569	-	NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC106000|CTTNBP2|83992|cortactin binding protein 2##AF377960|CTTNBP2|83992|cortactin binding protein 2##NM_033427|CTTNBP2|83992|cortactin binding protein 2##AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12	0.0	
chr7	150452671	150452778	reg1041788.p1	3.487	+	NM_001162367	-5901	+	TSC_hg19_v1_chr7_+_150434679 BC033688 BC011732	-18034	+	NM_018384 TSC_hg19_v1_chr7_+_150434485 AK002158 AK297881	-18249	+	TSC_hg19_v1_chr7_-_150497453 AK315575 AK000841 BC091471 AK129525 NM_001101311 NM_001101312 NM_001101314	44785	-	BC008303 TSC_hg19_v1_chr7_+_150497852 NM_018487 AF258340	45148	+	BC004358 BC014586 NM_014020 AK097304	45681	-	NM_001162367|LOC100128542|100128542|uncharacterized LOC100128542##BC033688|GIMAP5|55340|GTPase, IMAP family member 5##BC011732|GIMAP5|55340|GTPase, IMAP family member 5##NM_018384|GIMAP5|55340|GTPase, IMAP family member 5##AK002158|GIMAP5|55340|GTPase, IMAP family member 5##AK297881|GIMAP5|55340|GTPase, IMAP family member 5##AK315575|TMEM176B|28959|transmembrane protein 176B##AK000841|TMEM176B|28959|transmembrane protein 176B##BC091471|TMEM176B|28959|transmembrane protein 176B##AK129525|TMEM176B|28959|transmembrane protein 176B##NM_001101311|TMEM176B|28959|transmembrane protein 176B##NM_001101312|TMEM176B|28959|transmembrane protein 176B##NM_001101314|TMEM176B|28959|transmembrane protein 176B##BC008303|TMEM176A|55365|transmembrane protein 176A##NM_018487|TMEM176A|55365|transmembrane protein 176A##AF258340|TMEM176A|55365|transmembrane protein 176A##BC004358|TMEM176B|28959|transmembrane protein 176B##BC014586|TMEM176B|28959|transmembrane protein 176B##NM_014020|TMEM176B|28959|transmembrane protein 176B##AK097304|TMEM176B|28959|transmembrane protein 176B	0.0	
chr7	65447190	65447350	reg1035483.p2	3.487	+	TSC_hg19_v1_chr7_-_65447233 NM_000181	-4	-	TSC_hg19_v1_chr7_-_65447209 AK312752	-52	-	TSC_hg19_v1_chr7_-_65447200 M15182 AK303819 AK223406 AK300223 AK311273	-75	-	TSC_hg19_v1_chr7_+_65540820 NM_000048 BC008195 J03058 AK300519	93521	+	TSC_hg19_v1_chr7_+_65540823 AK310912 NM_001024943 NM_001024944 NM_001024946	93604	+	AK316334 TSC_hg19_v1_chr7_+_65540940 M14218 M57638 Y00753 BC033146	93710	+	NM_000181|GUSB|2990|glucuronidase, beta##AK312752|GUSB|2990|glucuronidase, beta##M15182|GUSB|2990|glucuronidase, beta##AK303819|GUSB|2990|glucuronidase, beta##AK223406|GUSB|2990|glucuronidase, beta##AK300223|GUSB|2990|glucuronidase, beta##AK311273|GUSB|2990|glucuronidase, beta##NM_000048|ASL|435|argininosuccinate lyase##BC008195|ASL|435|argininosuccinate lyase##J03058|ASL|435|argininosuccinate lyase##AK300519|ASL|435|argininosuccinate lyase##AK310912|ASL|435|argininosuccinate lyase##NM_001024943|ASL|435|argininosuccinate lyase##NM_001024944|ASL|435|argininosuccinate lyase##NM_001024946|ASL|435|argininosuccinate lyase##AK316334|ASL|435|argininosuccinate lyase##M14218|ASL|435|argininosuccinate lyase##M57638|ASL|435|argininosuccinate lyase##Y00753|ASL|435|argininosuccinate lyase##BC033146|ASL|435|argininosuccinate lyase	0.0	
chr8	22876263	22876444	reg1010660.p1	3.487	+	TSC_hg19_v1_chr8_+_22857415 AK292863 AY009093	-18916	+	AK314366 AK098744 TSC_hg19_v1_chr8_+_22857390	-18981	+	TSC_hg19_v1_chr8_+_22857067 AB018260 NM_015178	-19276	+	AB451272 AB451399 AF012628 AF018657 AF018658 AF020501 AF022386 CR541898 AB385139 TSC_hg19_v1_chr8_-_22926429	50066	-	TSC_hg19_v1_chr8_-_22926545 AF192548 AF016266 AF016268 AF153687 AK291216 AF012535 AF016849 AY358277 BX538104 AK298602 BC001281 NM_003842 NM_147187	50241	-	NM_003841 AK298664 BC017852 TSC_hg19_v1_chr8_+_22960433 AK313213 AK298718 AF012536 AY358281 AF016267 AF033854 AF014794 BC125041 BC125042 AF020502 AF012629 CR541857	84127	+	AK292863|RHOBTB2|23221|Rho-related BTB domain containing 2##AY009093|RHOBTB2|23221|Rho-related BTB domain containing 2##AK314366|RHOBTB2|23221|Rho-related BTB domain containing 2##AK098744|RHOBTB2|23221|Rho-related BTB domain containing 2##AB018260|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_015178|RHOBTB2|23221|Rho-related BTB domain containing 2##AB451272|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AB451399|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012628|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018657|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018658|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF020501|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF022386|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##CR541898|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF192548|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016266|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016268|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF153687|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK291216|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012535|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016849|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AY358277|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BX538104|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK298602|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BC001281|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003842|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_147187|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003841|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298664|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC017852|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK313213|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298718|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012536|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AY358281|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF016267|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF033854|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF014794|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125041|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125042|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF020502|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012629|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##CR541857|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain	0.0	
chr9	34155721	34155825	reg1038549.p1	3.487	+	TSC_hg19_v1_chr9_-_34126703 NM_015397	-29037	-	BC063823 TSC_hg19_v1_chr9_-_34126702 AB067479 DQ518909	-29078	-	AK000354 AK292935 TSC_hg19_v1_chr9_-_34126623	-29187	-	AK074812 AK303711 NM_001171201 NM_001171202 NM_001171203 NM_001171204 NM_016525 AK074426 TSC_hg19_v1_chr9_+_34179021	23238	+	AK074969 TSC_hg19_v1_chr9_+_34179031	23255	+	TSC_hg19_v1_chr9_+_34179039 AK074995 BC020950 AK074745 AK295482	23267	+	NM_015397|DCAF12|25853|DDB1 and CUL4 associated factor 12##BC063823|DCAF12|25853|DDB1 and CUL4 associated factor 12##AB067479|DCAF12|25853|DDB1 and CUL4 associated factor 12##DQ518909|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK000354|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK292935|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK074812|UBAP1|51271|ubiquitin associated protein 1##AK303711|UBAP1|51271|ubiquitin associated protein 1##NM_001171201|UBAP1|51271|ubiquitin associated protein 1##NM_001171202|UBAP1|51271|ubiquitin associated protein 1##NM_001171203|UBAP1|51271|ubiquitin associated protein 1##NM_001171204|UBAP1|51271|ubiquitin associated protein 1##NM_016525|UBAP1|51271|ubiquitin associated protein 1##AK074426|UBAP1|51271|ubiquitin associated protein 1##AK074969|UBAP1|51271|ubiquitin associated protein 1##AK074995|UBAP1|51271|ubiquitin associated protein 1##BC020950|UBAP1|51271|ubiquitin associated protein 1##AK074745|UBAP1|51271|ubiquitin associated protein 1##AK295482|UBAP1|51271|ubiquitin associated protein 1	0.866233	CTCF.p2:15:0.866
chrX	148280643	148280739	reg1028684.p1	3.487	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-480079	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-698503	+	BC034320 NM_152578 AY211917 AK098602	-1217836	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	306083	-	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	341739	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	341903	+	AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A	0.345844	CTCF.p2:-33:0.346
chr11	109385244	109385315	reg1036123.p1	3.486	+	BC068577 TSC_hg19_v1_chr11_+_109292911 BC035798	-92380	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	-92436	+	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	-849465	+	AK095101 TSC_hg19_v1_chr11_+_109963524	578249	+	NM_033390 AK295437 TSC_hg19_v1_chr11_+_109964174	578851	+	TSC_hg19_v1_chr11_-_110167340 BC002626 BC020751 BC047109 AK312903 AK316061 DQ916738 DQ916739 DQ916740 DQ916741 DQ916742 NM_002906	782034	-	BC068577|C11orf87|399947|chromosome 11 open reading frame 87##BC035798|C11orf87|399947|chromosome 11 open reading frame 87##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK095101|ZC3H12C|85463|zinc finger CCCH-type containing 12C##NM_033390|ZC3H12C|85463|zinc finger CCCH-type containing 12C##AK295437|ZC3H12C|85463|zinc finger CCCH-type containing 12C##BC002626|RDX|5962|radixin##BC020751|RDX|5962|radixin##BC047109|RDX|5962|radixin##AK312903|RDX|5962|radixin##AK316061|RDX|5962|radixin##DQ916738|RDX|5962|radixin##DQ916739|RDX|5962|radixin##DQ916740|RDX|5962|radixin##DQ916741|RDX|5962|radixin##DQ916742|RDX|5962|radixin##NM_002906|RDX|5962|radixin	0.0	
chr1	151253630	151253776	reg1038460.p2	3.486	+	TSC_hg19_v1_chr1_+_151227240 AB033605 BC002365 AB527552	-26456	+	TSC_hg19_v1_chr1_+_151227209 BC072008	-26482	+	TSC_hg19_v1_chr1_+_151227206 NM_002810 U24704	-26506	+	TSC_hg19_v1_chr1_+_151254004 CR749307	339	+	TSC_hg19_v1_chr1_+_151254774 AB037862 BC032463 NM_020832	1070	+	TSC_hg19_v1_chr1_-_151299858 BC000029 AK294606	46147	-	AB033605|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##BC002365|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##BC072008|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##NM_002810|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##U24704|PSMD4|5710|proteasome (prosome, macropain) 26S subunit, non-ATPase, 4##CR749307|ZNF687|57592|zinc finger protein 687##AB037862|ZNF687|57592|zinc finger protein 687##BC032463|ZNF687|57592|zinc finger protein 687##NM_020832|ZNF687|57592|zinc finger protein 687##BC000029|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta##AK294606|PI4KB|5298|phosphatidylinositol 4-kinase, catalytic, beta	0.674289	CTCF.p2:83:0.674
chr11	77938199	77938375	reg1033801.p1	3.486	+	AK056231 NM_020798 AK301048 AK307875 TSC_hg19_v1_chr11_+_77899953	-38362	+	TSC_hg19_v1_chr11_-_77899673 AK300320 BC036058 NM_001029859 AK095233	-38631	-	TSC_hg19_v1_chr11_+_77850827 AK124949	-87427	+	AB011143 BC152459 NM_012296	114638	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	190519	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	190589	-	AK056231|USP35|57558|ubiquitin specific peptidase 35##NM_020798|USP35|57558|ubiquitin specific peptidase 35##AK301048|USP35|57558|ubiquitin specific peptidase 35##AK307875|USP35|57558|ubiquitin specific peptidase 35##AK300320|KCTD21|283219|potassium channel tetramerisation domain containing 21##BC036058|KCTD21|283219|potassium channel tetramerisation domain containing 21##NM_001029859|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK095233|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK124949|LOC100289388|100289388|uncharacterized LOC100289388##AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##NM_080491|GAB2|9846|GRB2-associated binding protein 2	0.0	
chr1	19200251	19200429	reg1037023.p1	3.486	+	NM_152232 AB527225	-14185	-	NM_001135254 NM_002584 NM_013945 X96743	-242841	+	NM_152375	-392917	+	AK294552 NM_001161504	17044	-	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	28814	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	82459	-	NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##NM_001135254|PAX7|5081|paired box 7##NM_002584|PAX7|5081|paired box 7##NM_013945|PAX7|5081|paired box 7##X96743|PAX7|5081|paired box 7##NM_152375|KLHDC7A|127707|kelch domain containing 7A##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001136265|IFFO2|126917|intermediate filament family orphan 2	0.043754	
chr12	4278691	4278811	reg1037178.p1	3.486	+	AB529076 AK299372 AK314916 TSC_hg19_v1_chr12_-_3982536 CR749294 BX647487 BX640960 BC017569 BC031073 NM_020367	-296251	-	TSC_hg19_v1_chr12_-_3862364 AK057608 NM_001144958 NM_032680	-416369	-	TSC_hg19_v1_chr12_-_3862276 BC004524 AK304017	-416483	-	TSC_hg19_v1_chr12_+_4382962 NM_001759 AK223577 D13639 BC089384 BC010958 AK291146 X68452 M90813 AB385212 DQ892845 DQ896091 BT019847	104293	+	TSC_hg19_v1_chr12_+_4430378 NM_020375 AJ272206 AK313226 AY425618 BC012340 AB528081 AM392615	151640	+	TSC_hg19_v1_chr12_-_4488723 AB037973 AY358323 BC096713 BC098147 BC098252 BC069333 AB047858 AF263537 NM_020638	210049	-	AK299372|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK314916|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##CR749294|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX647487|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BX640960|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC017569|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##BC031073|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##NM_020367|PARP11|57097|poly (ADP-ribose) polymerase family, member 11##AK057608|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001144958|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_032680|EFCAB4B|84766|EF-hand calcium binding domain 4B##BC004524|EFCAB4B|84766|EF-hand calcium binding domain 4B##AK304017|EFCAB4B|84766|EF-hand calcium binding domain 4B##NM_001759|CCND2|894|cyclin D2##AK223577|CCND2|894|cyclin D2##D13639|CCND2|894|cyclin D2##BC089384|CCND2|894|cyclin D2##BC010958|CCND2|894|cyclin D2##AK291146|CCND2|894|cyclin D2##X68452|CCND2|894|cyclin D2##M90813|CCND2|894|cyclin D2##DQ892845|CCND2|894|cyclin D2##DQ896091|CCND2|894|cyclin D2##BT019847|CCND2|894|cyclin D2##NM_020375|C12orf5|57103|chromosome 12 open reading frame 5##AJ272206|C12orf5|57103|chromosome 12 open reading frame 5##AK313226|C12orf5|57103|chromosome 12 open reading frame 5##AY425618|C12orf5|57103|chromosome 12 open reading frame 5##BC012340|C12orf5|57103|chromosome 12 open reading frame 5##AM392615|C12orf5|57103|chromosome 12 open reading frame 5##AB037973|FGF23|8074|fibroblast growth factor 23##AY358323|FGF23|8074|fibroblast growth factor 23##BC096713|FGF23|8074|fibroblast growth factor 23##BC098147|FGF23|8074|fibroblast growth factor 23##BC098252|FGF23|8074|fibroblast growth factor 23##BC069333|FGF23|8074|fibroblast growth factor 23##AB047858|FGF23|8074|fibroblast growth factor 23##AF263537|FGF23|8074|fibroblast growth factor 23##NM_020638|FGF23|8074|fibroblast growth factor 23	0.0	
chr1	248645561	248645739	reg1040000.p1	3.486	+	BC136915 BC136916 NM_001005495	-9012	+	BC136961 BC136962 NM_001004136	-29563	+	AB463961 NM_030904	-76355	+	BC140915 BC140747 NM_001004697	6226	+	BC137245 BC137266 NM_001013355	39281	+	NM_001004694 BC140747 BC140915	77153	-	BC136915|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3##BC136916|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3##NM_001005495|OR2T3|343173|olfactory receptor, family 2, subfamily T, member 3##BC136961|OR2T2|401992|olfactory receptor, family 2, subfamily T, member 2##BC136962|OR2T2|401992|olfactory receptor, family 2, subfamily T, member 2##NM_001004136|OR2T2|401992|olfactory receptor, family 2, subfamily T, member 2##NM_030904|OR2T1|26696|olfactory receptor, family 2, subfamily T, member 1##BC140915|OR2T5|401993|olfactory receptor, family 2, subfamily T, member 5##BC140747|OR2T5|401993|olfactory receptor, family 2, subfamily T, member 5##NM_001004697|OR2T5|401993|olfactory receptor, family 2, subfamily T, member 5##BC137245|OR2G6|391211|olfactory receptor, family 2, subfamily G, member 6##BC137266|OR2G6|391211|olfactory receptor, family 2, subfamily G, member 6##NM_001013355|OR2G6|391211|olfactory receptor, family 2, subfamily G, member 6##NM_001004694|OR2T29|343563|olfactory receptor, family 2, subfamily T, member 29##BC140747|OR2T5|401993|olfactory receptor, family 2, subfamily T, member 5##BC140915|OR2T5|401993|olfactory receptor, family 2, subfamily T, member 5	0.0	
chr13	80582832	80582934	reg1037337.p1	3.486	+	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-527328	+	TSC_hg19_v1_chr13_+_80055411 AK297197 AK001723	-527461	+	TSC_hg19_v1_chr13_+_80055257 NM_001161407 NM_019080 AB097019 AB097028 AB097029	-527612	+	BC004205 TSC_hg19_v1_chr13_-_80913114	330159	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	332181	-	TSC_hg19_v1_chr13_-_84456424 BC051738	3873542	-	AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##AK297197|NDFIP2|54602|Nedd4 family interacting protein 2##AK001723|NDFIP2|54602|Nedd4 family interacting protein 2##NM_001161407|NDFIP2|54602|Nedd4 family interacting protein 2##NM_019080|NDFIP2|54602|Nedd4 family interacting protein 2##AB097019|NDFIP2|54602|Nedd4 family interacting protein 2##AB097028|NDFIP2|54602|Nedd4 family interacting protein 2##AB097029|NDFIP2|54602|Nedd4 family interacting protein 2##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1	0.132569	
chr15	66881143	66881241	reg1032590.p2	3.486	+	TSC_hg19_v1_chr15_+_66874506 BC016970	-6676	+	AB527178 AY358729 NM_207338	-23423	-	AK122787 TSC_hg19_v1_chr15_+_66797663 AK291048 BC090041 BC036900	-83534	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	113482	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	114367	+	NM_001142861 U59914	119737	+	AY358729|LCTL|197021|lactase-like##NM_207338|LCTL|197021|lactase-like##AK122787|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AK291048|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC090041|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##BC036900|ZWILCH|55055|Zwilch, kinetochore associated, homolog (Drosophila)##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6	0.0	
chr16	10962750	10962817	reg1040957.p2	3.486	+	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	-50235	-	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-125079	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-174018	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	8329	+	BC071683 TSC_hg19_v1_chr16_-_11036171	73383	-	TSC_hg19_v1_chr16_-_11036218 AK314111 BC037569 NM_014015	73452	-	BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)##AK314111|DEXI|28955|Dexi homolog (mouse)##BC037569|DEXI|28955|Dexi homolog (mouse)##NM_014015|DEXI|28955|Dexi homolog (mouse)	0.0	
chr18	20611579	20611668	reg1037956.p2	3.486	+	TSC_hg19_v1_chr18_+_20513833 BC001170 NM_203291 NM_203292 AF043431 BX648221	-97808	+	TSC_hg19_v1_chr18_+_20513319 NM_002894 U72066 AK292481	-98275	+	HQ258502 BC132871 AF273058 BC031065 BC070128 NM_172241	-613798	-	EF028204 NM_001100619	104103	+	BC037218 NM_138375	124165	+	AK303553 BC114510 BC114561 AK294916 TSC_hg19_v1_chr18_-_21017926 AK123623 AK126247 NM_032933	406248	-	BC001170|RBBP8|5932|retinoblastoma binding protein 8##NM_203291|RBBP8|5932|retinoblastoma binding protein 8##NM_203292|RBBP8|5932|retinoblastoma binding protein 8##AF043431|RBBP8|5932|retinoblastoma binding protein 8##BX648221|RBBP8|5932|retinoblastoma binding protein 8##NM_002894|RBBP8|5932|retinoblastoma binding protein 8##U72066|RBBP8|5932|retinoblastoma binding protein 8##AK292481|RBBP8|5932|retinoblastoma binding protein 8##HQ258502|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC132871|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##AF273058|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC031065|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##BC070128|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##NM_172241|CTAGE1|64693|cutaneous T-cell lymphoma-associated antigen 1##EF028204|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_001100619|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##BC037218|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##NM_138375|CABLES1|91768|Cdk5 and Abl enzyme substrate 1##AK303553|TMEM241|85019|transmembrane protein 241##BC114510|TMEM241|85019|transmembrane protein 241##BC114561|TMEM241|85019|transmembrane protein 241##AK294916|TMEM241|85019|transmembrane protein 241##AK123623|TMEM241|85019|transmembrane protein 241##AK126247|TMEM241|85019|transmembrane protein 241##NM_032933|TMEM241|85019|transmembrane protein 241	0.463251	CTCF.p2:27:0.463
chr19	16556400	16556580	reg1020812.p2	3.486	+	AF134053 TSC_hg19_v1_chr19_+_16435803	-120721	+	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	-120849	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	-247740	+	BC142662 AB527825 AF110265 BC131590 BC037558 TSC_hg19_v1_chr19_-_16582771 AB015346 NM_021235 BC067114 BC051873 BC142716 AK296473 AK297428 AK024166	26286	-	TSC_hg19_v1_chr19_-_16582810 AK291359	26362	-	CU677059 AB576176 DQ890903 DQ894056 AK058084 BC014595 NM_145046	50480	-	AF134053|KLF2|10365|Kruppel-like factor 2 (lung)##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)##AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC142662|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AF110265|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC131590|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC037558|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB015346|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##NM_021235|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC067114|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC051873|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC142716|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK296473|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK297428|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK024166|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK291359|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB576176|CALR3|125972|calreticulin 3##DQ890903|CALR3|125972|calreticulin 3##DQ894056|CALR3|125972|calreticulin 3##AK058084|CALR3|125972|calreticulin 3##BC014595|CALR3|125972|calreticulin 3##NM_145046|CALR3|125972|calreticulin 3	0.0	
chr5	126114055	126114228	reg1041176.p1	3.486	+	TSC_hg19_v1_chr5_+_126113050 AB527547 DQ891592 EU176582 CU680274	-1017	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	-1259	+	BC103723 TSC_hg19_v1_chr5_+_126112841 AK303084 NM_001198557	-1310	+	BC146948 BC146964 AF055007 TSC_hg19_v1_chr5_-_126366251 BC047569 AK290129	252034	-	NM_178450	252298	-	AK126569 NM_001164478 NM_001164479	295036	-	DQ891592|LMNB1|4001|lamin B1##EU176582|LMNB1|4001|lamin B1##AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1##BC103723|LMNB1|4001|lamin B1##AK303084|LMNB1|4001|lamin B1##NM_001198557|LMNB1|4001|lamin B1##BC146948|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146964|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AF055007|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC047569|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK290129|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63	0.0	
chr5	171467096	171467277	reg1003534.p1	3.486	+	BC026213 NM_012300 NM_033644 NM_033645	-33310	-	AB033279 TSC_hg19_v1_chr5_-_171433643 AB033281 AB033280	-33542	-	TSC_hg19_v1_chr5_-_171433553 AK314999 DQ891125 DQ894304 AF176022 AB014596	-33658	-	AB015718 TSC_hg19_v1_chr5_-_171615170	147952	-	AK307943 TSC_hg19_v1_chr5_-_171615203	148017	-	TSC_hg19_v1_chr5_-_171615241 BC070077 AK313350	148087	-	BC026213|FBXW11|23291|F-box and WD repeat domain containing 11##NM_012300|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033644|FBXW11|23291|F-box and WD repeat domain containing 11##NM_033645|FBXW11|23291|F-box and WD repeat domain containing 11##AB033279|FBXW11|23291|F-box and WD repeat domain containing 11##AB033281|FBXW11|23291|F-box and WD repeat domain containing 11##AB033280|FBXW11|23291|F-box and WD repeat domain containing 11##AK314999|FBXW11|23291|F-box and WD repeat domain containing 11##DQ891125|FBXW11|23291|F-box and WD repeat domain containing 11##DQ894304|FBXW11|23291|F-box and WD repeat domain containing 11##AF176022|FBXW11|23291|F-box and WD repeat domain containing 11##AB014596|FBXW11|23291|F-box and WD repeat domain containing 11##AB015718|STK10|6793|serine/threonine kinase 10##AK307943|STK10|6793|serine/threonine kinase 10##BC070077|STK10|6793|serine/threonine kinase 10##AK313350|STK10|6793|serine/threonine kinase 10	0.0	
chr5	98565157	98565300	reg1039850.p2	3.486	+	BC054860 BC117134 NM_001270 AF006513	-303000	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	-460187	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-2046241	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	1305845	+	AF529367 TSC_hg19_v1_chr5_+_99871306	1306042	+	L41680 BC027866 TSC_hg19_v1_chr5_-_100238968 AK292872 BC053657 NM_175052 NM_005668	1673700	-	BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A##AF529367|FAM174A|345757|family with sequence similarity 174, member A##L41680|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC027866|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##AK292872|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##BC053657|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_175052|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4##NM_005668|ST8SIA4|7903|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	0.0	
chr6	100920820	100920951	reg1038435.p2	3.486	+	NM_005068 U70212	-9335	-	AK123634 NM_001040179 NM_032503 AF347063	-478775	-	AY004253 NM_021620	-866236	+	BC125211 BC125212 BC130038 TSC_hg19_v1_chr6_-_101329178 BC050681 AK307903 AK315197	408215	-	TSC_hg19_v1_chr6_-_101329201 NM_006828 NM_022091	408331	-	TSC_hg19_v1_chr6_-_101329241 BC026066 AK299117	408358	-	NM_005068|SIM1|6492|single-minded homolog 1 (Drosophila)##U70212|SIM1|6492|single-minded homolog 1 (Drosophila)##AK123634|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_001040179|MCHR2|84539|melanin-concentrating hormone receptor 2##NM_032503|MCHR2|84539|melanin-concentrating hormone receptor 2##AF347063|MCHR2|84539|melanin-concentrating hormone receptor 2##AY004253|PRDM13|59336|PR domain containing 13##NM_021620|PRDM13|59336|PR domain containing 13##BC125211|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC125212|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC130038|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC050681|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK307903|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK315197|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_006828|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##NM_022091|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##BC026066|ASCC3|10973|activating signal cointegrator 1 complex subunit 3##AK299117|ASCC3|10973|activating signal cointegrator 1 complex subunit 3	0.0	
chr6	130850939	130851057	reg1035106.p1	3.486	+	AB052099 NM_052913	-92737	+	AK091882 AX747235 NM_001017373	-306900	-	AB527209 CU688766 BC029851 BC119757 BC119758 BC127653 BC127654 NM_152552	-314543	-	BC113027 NM_001195597 AK091900 AX747243 BC101422 BC101423 BC101424 BC101425 BC113026 TSC_hg19_v1_chr6_+_131148577	297564	+	TSC_hg19_v1_chr6_-_131291480 AK307764 NM_001199389	440553	-	CR749262 CR936793 NM_001252660	470889	-	AB052099|TMEM200A|114801|transmembrane protein 200A##NM_052913|TMEM200A|114801|transmembrane protein 200A##AK091882|SAMD3|154075|sterile alpha motif domain containing 3##NM_001017373|SAMD3|154075|sterile alpha motif domain containing 3##BC029851|SAMD3|154075|sterile alpha motif domain containing 3##BC119757|SAMD3|154075|sterile alpha motif domain containing 3##BC119758|SAMD3|154075|sterile alpha motif domain containing 3##BC127653|SAMD3|154075|sterile alpha motif domain containing 3##BC127654|SAMD3|154075|sterile alpha motif domain containing 3##NM_152552|SAMD3|154075|sterile alpha motif domain containing 3##BC113027|LOC100507203|100507203|uncharacterized LOC100507203##NM_001195597|LOC100507203|100507203|uncharacterized LOC100507203##AK091900|LOC100507203|100507203|uncharacterized LOC100507203##BC101422|LOC100507203|100507203|uncharacterized LOC100507203##BC101423|LOC100507203|100507203|uncharacterized LOC100507203##BC101424|LOC100507203|100507203|uncharacterized LOC100507203##BC101425|LOC100507203|100507203|uncharacterized LOC100507203##BC113026|LOC100507203|100507203|uncharacterized LOC100507203##AK307764|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001199389|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR749262|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##CR936793|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2##NM_001252660|EPB41L2|2037|erythrocyte membrane protein band 4.1-like 2	0.0	
chr6	51799068	51799167	reg1041177.p2	3.486	+	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-1012582	+	AY028376 NM_172238	-1117861	+	DQ012016 NM_001037498	-1782754	-	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	153278	-	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	252089	+	AF384857 JF305974 AB590713 BC070124 NM_052872	310144	-	NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AY028376|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##NM_172238|TFAP2D|83741|transcription factor AP-2 delta (activating enhancer binding protein 2 delta)##DQ012016|DEFB112|245915|defensin, beta 112##NM_001037498|DEFB112|245915|defensin, beta 112##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F	0.229656	CTCF.p2:4:0.230
chr7	6296479	6296660	reg1028420.p1	3.486	+	TSC_hg19_v1_chr7_+_6144605 AK022759 AY618868 BC060846 AK309375	-151971	+	TSC_hg19_v1_chr7_+_6144564 NM_032172 AK298164	-152026	+	TSC_hg19_v1_chr7_-_6098822 NM_001134335 NM_014413	-197722	-	AB528964 DQ891736 DQ894912 EU176610 AJ223957 TSC_hg19_v1_chr7_-_6312242 AJ005197 NM_004227 AK313728 BC028717	15662	-	TSC_hg19_v1_chr7_-_6388581 AK311878 AF533707 BC006110 NM_001037163 BC142977	91941	-	TSC_hg19_v1_chr7_+_6414179 NM_006908 NM_018890 AK054993 BC107748 AK291806 AB209410 BC050687 AK291815 AY279384 BC004247 AB451238 AB451363 AB464133 AF136373 AF498964 AJ132694 BT007121 CU690768 EU831965 EU832058 EU832640 EU832717 M29870 M31467	117658	+	AK022759|USP42|84132|ubiquitin specific peptidase 42##AY618868|USP42|84132|ubiquitin specific peptidase 42##BC060846|USP42|84132|ubiquitin specific peptidase 42##AK309375|USP42|84132|ubiquitin specific peptidase 42##NM_032172|USP42|84132|ubiquitin specific peptidase 42##AK298164|USP42|84132|ubiquitin specific peptidase 42##NM_001134335|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##NM_014413|EIF2AK1|27102|eukaryotic translation initiation factor 2-alpha kinase 1##DQ891736|CYTH3|9265|cytohesin 3##DQ894912|CYTH3|9265|cytohesin 3##EU176610|CYTH3|9265|cytohesin 3##AJ223957|CYTH3|9265|cytohesin 3##AJ005197|CYTH3|9265|cytohesin 3##NM_004227|CYTH3|9265|cytohesin 3##AK313728|CYTH3|9265|cytohesin 3##BC028717|CYTH3|9265|cytohesin 3##AK311878|C7orf70|84792|chromosome 7 open reading frame 70##AF533707|C7orf70|84792|chromosome 7 open reading frame 70##BC006110|C7orf70|84792|chromosome 7 open reading frame 70##NM_001037163|C7orf70|84792|chromosome 7 open reading frame 70##BC142977|C7orf70|84792|chromosome 7 open reading frame 70##NM_006908|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##NM_018890|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK054993|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC107748|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291806|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB209410|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC050687|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AK291815|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AY279384|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BC004247|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451238|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AB451363|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF136373|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AF498964|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##AJ132694|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##BT007121|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU831965|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832058|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832640|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##EU832717|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M29870|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)##M31467|RAC1|5879|ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)	0.0	
chr7	92669256	92669366	reg1041529.p1	3.486	+	TSC_hg19_v1_chr7_-_92465935 NM_001145306	-203377	-	AK313491 TSC_hg19_v1_chr7_-_92465884	-203413	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	-206091	-	AB095925 BC150249 AK122951 TSC_hg19_v1_chr7_-_92747292 BX647072 AF453311	77972	-	TSC_hg19_v1_chr7_-_92747328 BC065769 AF445355 NM_001193307 NM_017654	78015	-	AF474973 AY195582 AY195583 AY195584 AY195585 AY195586 AY195587 DQ068177 TSC_hg19_v1_chr7_-_92777683 AB095926 NM_152703	108359	-	NM_001145306|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AB095925|SAMD9|54809|sterile alpha motif domain containing 9##BC150249|SAMD9|54809|sterile alpha motif domain containing 9##AK122951|SAMD9|54809|sterile alpha motif domain containing 9##BX647072|SAMD9|54809|sterile alpha motif domain containing 9##AF453311|SAMD9|54809|sterile alpha motif domain containing 9##BC065769|SAMD9|54809|sterile alpha motif domain containing 9##AF445355|SAMD9|54809|sterile alpha motif domain containing 9##NM_001193307|SAMD9|54809|sterile alpha motif domain containing 9##NM_017654|SAMD9|54809|sterile alpha motif domain containing 9##AF474973|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195582|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195583|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195584|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195585|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195586|SAMD9L|219285|sterile alpha motif domain containing 9-like##AY195587|SAMD9L|219285|sterile alpha motif domain containing 9-like##DQ068177|SAMD9L|219285|sterile alpha motif domain containing 9-like##AB095926|SAMD9L|219285|sterile alpha motif domain containing 9-like##NM_152703|SAMD9L|219285|sterile alpha motif domain containing 9-like	0.0	
chr8	101464227	101464350	reg1044281.p1	3.486	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-142003	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-142107	-	AB271913 AB271914 AB029316 NM_015435	-148817	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	107652	-	AK093906 AX748361 NM_152628	197604	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	269518	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chrX	11369864	11370001	reg1042066.p2	3.486	+	AF436849 BC069118 M86932 NM_001142 NM_182680 NM_182681 BC074951	-58390	+	AF177663 NM_013423 AK297713	-85824	-	TSC_hg19_v1_chrX_+_11129467 BC001691 BC095455 U36787	-240463	+	AF012272 AF022212 AF117067 NM_006125 NM_013427	313888	-	AF117065 NM_078628 NM_078629 BC031210 BC010925 AK289780 BC017267 AB463853 DQ891661 DQ894848 AK294255	406411	+	NM_001193270 AK300814	406785	+	AF436849|AMELX|265|amelogenin, X-linked##BC069118|AMELX|265|amelogenin, X-linked##M86932|AMELX|265|amelogenin, X-linked##NM_001142|AMELX|265|amelogenin, X-linked##NM_182680|AMELX|265|amelogenin, X-linked##NM_182681|AMELX|265|amelogenin, X-linked##BC074951|AMELX|265|amelogenin, X-linked##AF177663|ARHGAP6|395|Rho GTPase activating protein 6##NM_013423|ARHGAP6|395|Rho GTPase activating protein 6##AK297713|ARHGAP6|395|Rho GTPase activating protein 6##BC001691|HCCS|3052|holocytochrome c synthase##BC095455|HCCS|3052|holocytochrome c synthase##U36787|HCCS|3052|holocytochrome c synthase##AF012272|ARHGAP6|395|Rho GTPase activating protein 6##AF022212|ARHGAP6|395|Rho GTPase activating protein 6##AF117067|ARHGAP6|395|Rho GTPase activating protein 6##NM_006125|ARHGAP6|395|Rho GTPase activating protein 6##NM_013427|ARHGAP6|395|Rho GTPase activating protein 6##AF117065|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078628|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_078629|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC031210|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC010925|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK289780|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##BC017267|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ891661|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##DQ894848|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK294255|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##NM_001193270|MSL3|10943|male-specific lethal 3 homolog (Drosophila)##AK300814|MSL3|10943|male-specific lethal 3 homolog (Drosophila)	0.0	
chr1	101009541	101009619	reg1013951.p2	3.485	+	AK225748 TSC_hg19_v1_chr1_+_101004594	-5052	+	AB042410 BC036775 NM_022049	-5871	+	BC071578 TSC_hg19_v1_chr1_+_100818053 AF064103 AK310657 AF000367	-191477	+	NM_001078 NM_001199834 NM_080682 TSC_hg19_v1_chr1_+_101185297 AK223266 AK291732 AK296692 BC068490 M30257 BC017276 BC085003 M60335 AB590609 EU831989 EU832082 X53051 CU686647	175726	+	TSC_hg19_v1_chr1_-_101360249 BC014910	350687	-	TSC_hg19_v1_chr1_-_101360368 AK312895 AB009284 AF000416 AK096914 BC036015 AK298124 BC001649 BC001835 BC008722	350790	-	AK225748|GPR88|54112|G protein-coupled receptor 88##AB042410|GPR88|54112|G protein-coupled receptor 88##BC036775|GPR88|54112|G protein-coupled receptor 88##NM_022049|GPR88|54112|G protein-coupled receptor 88##BC071578|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF064103|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AK310657|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##AF000367|CDC14A|8556|CDC14 cell division cycle 14 homolog A (S. cerevisiae)##NM_001078|VCAM1|7412|vascular cell adhesion molecule 1##NM_001199834|VCAM1|7412|vascular cell adhesion molecule 1##NM_080682|VCAM1|7412|vascular cell adhesion molecule 1##AK223266|VCAM1|7412|vascular cell adhesion molecule 1##AK291732|VCAM1|7412|vascular cell adhesion molecule 1##AK296692|VCAM1|7412|vascular cell adhesion molecule 1##BC068490|VCAM1|7412|vascular cell adhesion molecule 1##M30257|VCAM1|7412|vascular cell adhesion molecule 1##BC017276|VCAM1|7412|vascular cell adhesion molecule 1##BC085003|VCAM1|7412|vascular cell adhesion molecule 1##M60335|VCAM1|7412|vascular cell adhesion molecule 1##EU831989|VCAM1|7412|vascular cell adhesion molecule 1##EU832082|VCAM1|7412|vascular cell adhesion molecule 1##X53051|VCAM1|7412|vascular cell adhesion molecule 1##BC014910|EXTL2|2135|exostoses (multiple)-like 2##AK312895|EXTL2|2135|exostoses (multiple)-like 2##AB009284|EXTL2|2135|exostoses (multiple)-like 2##AF000416|EXTL2|2135|exostoses (multiple)-like 2##AK096914|EXTL2|2135|exostoses (multiple)-like 2##BC036015|EXTL2|2135|exostoses (multiple)-like 2##AK298124|EXTL2|2135|exostoses (multiple)-like 2	0.0	
chr1	115439300	115439380	reg1046810.p1	3.485	+	NM_003176 BC026162 AK315268 AF273043 BC105299 BC126266 BC144019 BC144020 BC065190 X95654	-41828	+	TSC_hg19_v1_chr1_-_115323268 BC005934 AK024821 AK225734 CR749219 CR936771 AK126316 NM_001102396 NM_025073	-116045	-	AB590611 EU832701 TSC_hg19_v1_chr1_-_115323253	-116099	-	NM_000549	133074	+	TSC_hg19_v1_chr1_-_115632112 AF054839 GU971730 DQ893690 DQ893691 DQ893692 DQ893693 EU176787 AK315385 BC021675 NM_005725	192776	-	BC032517 NM_002506 X52599	441513	-	NM_003176|SYCP1|6847|synaptonemal complex protein 1##BC026162|SYCP1|6847|synaptonemal complex protein 1##AK315268|SYCP1|6847|synaptonemal complex protein 1##AF273043|SYCP1|6847|synaptonemal complex protein 1##BC105299|SYCP1|6847|synaptonemal complex protein 1##BC126266|SYCP1|6847|synaptonemal complex protein 1##BC144019|SYCP1|6847|synaptonemal complex protein 1##BC144020|SYCP1|6847|synaptonemal complex protein 1##BC065190|SYCP1|6847|synaptonemal complex protein 1##X95654|SYCP1|6847|synaptonemal complex protein 1##BC005934|SIKE1|80143|suppressor of IKBKE 1##AK024821|SIKE1|80143|suppressor of IKBKE 1##AK225734|SIKE1|80143|suppressor of IKBKE 1##CR749219|SIKE1|80143|suppressor of IKBKE 1##CR936771|SIKE1|80143|suppressor of IKBKE 1##AK126316|SIKE1|80143|suppressor of IKBKE 1##NM_001102396|SIKE1|80143|suppressor of IKBKE 1##NM_025073|SIKE1|80143|suppressor of IKBKE 1##EU832701|SIKE1|80143|suppressor of IKBKE 1##NM_000549|TSHB|7252|thyroid stimulating hormone, beta##AF054839|TSPAN2|10100|tetraspanin 2##GU971730|TSPAN2|10100|tetraspanin 2##DQ893690|TSPAN2|10100|tetraspanin 2##DQ893691|TSPAN2|10100|tetraspanin 2##DQ893692|TSPAN2|10100|tetraspanin 2##DQ893693|TSPAN2|10100|tetraspanin 2##EU176787|TSPAN2|10100|tetraspanin 2##AK315385|TSPAN2|10100|tetraspanin 2##BC021675|TSPAN2|10100|tetraspanin 2##NM_005725|TSPAN2|10100|tetraspanin 2##BC032517|NGF|4803|nerve growth factor (beta polypeptide)##NM_002506|NGF|4803|nerve growth factor (beta polypeptide)##X52599|NGF|4803|nerve growth factor (beta polypeptide)	0.0	
chr1	145401911	145402092	reg1014168.p1	3.485	+	AY894562 AY894570 NM_001039703	-108700	+	TSC_hg19_v1_chr1_+_145209107 NM_203458 BC010154 AK075065 BC090943 BC019835 AK092351 AK098372 AX747492 BC065219 AK293876 BC084572	-192880	+	TSC_hg19_v1_chr1_+_145096519 CU674670 DQ892584 DQ895801	-305469	+	NM_145277 NM_202004 NM_213652 NM_213653 AK223575 AK092682 AK315852 AX747669 BC017926 AK096905 AK290831 AK292742 AK092692 AK124273 AX747673 BC085604	11262	+	TSC_hg19_v1_chr1_+_145438489 NM_006472 AK301203 BX537824 AK226090 S73591 BC093702 BC093704 AB527234 AY594328 BC024305 AK301148	36675	+	TSC_hg19_v1_chr1_-_145470375 AK092209 AK056984 BC004355 NM_032305 BC050418	68387	-	AY894562|NBPF8|728841|neuroblastoma breakpoint family, member 8##AY894570|NBPF8|728841|neuroblastoma breakpoint family, member 8##NM_001039703|NBPF10|100132406|neuroblastoma breakpoint family, member 10##NM_203458|NOTCH2NL|388677|notch 2 N-terminal like##BC010154|NOTCH2NL|388677|notch 2 N-terminal like##AK075065|NOTCH2NL|388677|notch 2 N-terminal like##BC090943|NOTCH2NL|388677|notch 2 N-terminal like##BC019835|NOTCH2NL|388677|notch 2 N-terminal like##BC065219|NOTCH2NL|388677|notch 2 N-terminal like##BC084572|NOTCH2NL|388677|notch 2 N-terminal like##DQ892584|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##DQ895801|SEC22B|9554|SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene)##NM_145277|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_202004|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213652|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_213653|HFE2|148738|hemochromatosis type 2 (juvenile)##AK223575|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092682|HFE2|148738|hemochromatosis type 2 (juvenile)##AK315852|HFE2|148738|hemochromatosis type 2 (juvenile)##BC017926|HFE2|148738|hemochromatosis type 2 (juvenile)##AK096905|HFE2|148738|hemochromatosis type 2 (juvenile)##AK290831|HFE2|148738|hemochromatosis type 2 (juvenile)##AK292742|HFE2|148738|hemochromatosis type 2 (juvenile)##AK092692|HFE2|148738|hemochromatosis type 2 (juvenile)##AK124273|HFE2|148738|hemochromatosis type 2 (juvenile)##BC085604|HFE2|148738|hemochromatosis type 2 (juvenile)##NM_006472|TXNIP|10628|thioredoxin interacting protein##AK301203|TXNIP|10628|thioredoxin interacting protein##BX537824|TXNIP|10628|thioredoxin interacting protein##AK226090|TXNIP|10628|thioredoxin interacting protein##S73591|TXNIP|10628|thioredoxin interacting protein##BC093702|TXNIP|10628|thioredoxin interacting protein##BC093704|TXNIP|10628|thioredoxin interacting protein##AY594328|TXNIP|10628|thioredoxin interacting protein##BC024305|TXNIP|10628|thioredoxin interacting protein##AK301148|TXNIP|10628|thioredoxin interacting protein##AK092209|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##AK056984|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC004355|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##NM_032305|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like##BC050418|POLR3GL|84265|polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like	0.0	
chr1	21059677	21059774	reg1034391.p1	3.485	+	AK124869 NM_001103160 NM_001103161	-593	-	AK296431 TSC_hg19_v1_chr1_-_21058714	-1018	-	AB463089 BC065927 AB290162 NM_001122819 NM_020816	-15466	-	TSC_hg19_v1_chr1_-_21113146 BC053327 BC032139	53393	-	TSC_hg19_v1_chr1_-_21113155 AK291252	53427	-	TSC_hg19_v1_chr1_-_21113163 AK023129 NM_016287	53447	-	AK124869|SH2D5|400745|SH2 domain containing 5##NM_001103160|SH2D5|400745|SH2 domain containing 5##NM_001103161|SH2D5|400745|SH2 domain containing 5##AK296431|SH2D5|400745|SH2 domain containing 5##BC065927|KIF17|57576|kinesin family member 17##AB290162|KIF17|57576|kinesin family member 17##NM_001122819|KIF17|57576|kinesin family member 17##NM_020816|KIF17|57576|kinesin family member 17##BC053327|HP1BP3|50809|heterochromatin protein 1, binding protein 3##BC032139|HP1BP3|50809|heterochromatin protein 1, binding protein 3##AK291252|HP1BP3|50809|heterochromatin protein 1, binding protein 3##AK023129|HP1BP3|50809|heterochromatin protein 1, binding protein 3##NM_016287|HP1BP3|50809|heterochromatin protein 1, binding protein 3	0.0	
chr12	57456687	57456828	reg1028969.p2	3.485	+	AF105424 AF127026 NM_005379 BC059387	-12878	-	AF216586 AF186112 AX810719 AF136174 AX810703 AF537113 AF537114 AF537115 AF537116 AF537117 AF537118 AF537119 AF537120 AF537121 AY358679 BC032145 NM_001178054 NM_013251	-46448	-	BC140890 BC146867 AB002350 BC152461 TSC_hg19_v1_chr12_-_57400241 AK292468 NM_014830	-56506	-	TSC_hg19_v1_chr12_-_57472533 HQ258223 AB383838 AB006624	15754	-	TSC_hg19_v1_chr12_-_57472537 BC071597 BC117436 BC126300 BC144029 CR749406 AK294566	15783	-	TSC_hg19_v1_chr12_-_57472548 AL833310 AL833311	15792	-	AF105424|MYO1A|4640|myosin IA##AF127026|MYO1A|4640|myosin IA##NM_005379|MYO1A|4640|myosin IA##BC059387|MYO1A|4640|myosin IA##AF216586|TAC3|6866|tachykinin 3##AF186112|TAC3|6866|tachykinin 3##AF537113|TAC3|6866|tachykinin 3##AF537114|TAC3|6866|tachykinin 3##AF537115|TAC3|6866|tachykinin 3##AF537116|TAC3|6866|tachykinin 3##AF537117|TAC3|6866|tachykinin 3##AF537118|TAC3|6866|tachykinin 3##AF537119|TAC3|6866|tachykinin 3##AF537120|TAC3|6866|tachykinin 3##AF537121|TAC3|6866|tachykinin 3##AY358679|TAC3|6866|tachykinin 3##BC032145|TAC3|6866|tachykinin 3##NM_001178054|TAC3|6866|tachykinin 3##NM_013251|TAC3|6866|tachykinin 3##BC140890|ZBTB39|9880|zinc finger and BTB domain containing 39##BC146867|ZBTB39|9880|zinc finger and BTB domain containing 39##AB002350|ZBTB39|9880|zinc finger and BTB domain containing 39##BC152461|ZBTB39|9880|zinc finger and BTB domain containing 39##AK292468|ZBTB39|9880|zinc finger and BTB domain containing 39##NM_014830|ZBTB39|9880|zinc finger and BTB domain containing 39##HQ258223|TMEM194A|23306|transmembrane protein 194A##AB006624|TMEM194A|23306|transmembrane protein 194A##BC071597|TMEM194A|23306|transmembrane protein 194A##BC117436|TMEM194A|23306|transmembrane protein 194A##BC126300|TMEM194A|23306|transmembrane protein 194A##BC144029|TMEM194A|23306|transmembrane protein 194A##CR749406|TMEM194A|23306|transmembrane protein 194A##AK294566|TMEM194A|23306|transmembrane protein 194A##AL833310|TMEM194A|23306|transmembrane protein 194A##AL833311|TMEM194A|23306|transmembrane protein 194A	0.967562	
chr12	6717533	6717653	reg1025435.p2	3.485	+	AK128741 NM_001273 TSC_hg19_v1_chr12_-_6716562	-1037	-	X86691 TSC_hg19_v1_chr12_-_6716523 BC014964 BC025962 BC038596	-1092	-	CR936680 EU446505 TSC_hg19_v1_chr12_-_6715604	-2025	-	NM_001142961 TSC_hg19_v1_chr12_-_6740816	23222	-	BC033571 TSC_hg19_v1_chr12_-_6745131 AK313127 BC072394 NM_020400	27598	-	DQ890872 DQ894028 TSC_hg19_v1_chr12_-_6756578 AK302290 AK311572 BC033010 AB051833 NM_032489	38971	-	AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4##NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4##X86691|CHD4|1108|chromodomain helicase DNA binding protein 4##BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4##BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4##BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4##CR936680|CHD4|1108|chromodomain helicase DNA binding protein 4##EU446505|CHD4|1108|chromodomain helicase DNA binding protein 4##NM_001142961|LPAR5|57121|lysophosphatidic acid receptor 5##BC033571|LPAR5|57121|lysophosphatidic acid receptor 5##AK313127|LPAR5|57121|lysophosphatidic acid receptor 5##BC072394|LPAR5|57121|lysophosphatidic acid receptor 5##NM_020400|LPAR5|57121|lysophosphatidic acid receptor 5##DQ890872|ACRBP|84519|acrosin binding protein##DQ894028|ACRBP|84519|acrosin binding protein##AK302290|ACRBP|84519|acrosin binding protein##AK311572|ACRBP|84519|acrosin binding protein##BC033010|ACRBP|84519|acrosin binding protein##AB051833|ACRBP|84519|acrosin binding protein##NM_032489|ACRBP|84519|acrosin binding protein	0.0	
chr12	7054005	7054072	reg1036976.p1	3.485	+	TSC_hg19_v1_chr12_+_7053185 AK311912 BC009925 NM_138425	-841	+	TSC_hg19_v1_chr12_+_7045476 AB209345	-8582	+	TSC_hg19_v1_chr12_+_7037385 NM_001940 D31840	-16605	+	TSC_hg19_v1_chr12_+_7055736 AK313379 NM_080548	1699	+	BC002523 BC007667 TSC_hg19_v1_chr12_+_7055771 AK300167 AB590143 BT007390 CU675749 DQ891946 DQ895133	1782	+	NM_002831 NM_080549 TSC_hg19_v1_chr12_+_7060446	6403	+	AK311912|C12orf57|113246|chromosome 12 open reading frame 57##BC009925|C12orf57|113246|chromosome 12 open reading frame 57##NM_138425|C12orf57|113246|chromosome 12 open reading frame 57##NM_001940|ATN1|1822|atrophin 1##D31840|ATN1|1822|atrophin 1##AK313379|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##NM_080548|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##BC002523|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##BC007667|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK300167|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##BT007390|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ891946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ895133|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##NM_002831|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##NM_080549|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6	0.0	
chr12	9102799	9102877	reg1023322.p2	3.485	+	TSC_hg19_v1_chr12_-_9102262 NM_001207024 NM_002355	-529	-	TSC_hg19_v1_chr12_-_9102242 AK291143 M16985 AK222792 BC024206 AK312689	-620	-	TSC_hg19_v1_chr12_+_9067153 AB209063 AK293893 NM_004426 BC073964 U89277 BC157850	-35569	+	AK316337 BC012621 AK301367 AF081675 AF097358 NM_005810 AF034952 DQ892820 DQ896066	39345	+	TSC_hg19_v1_chr12_-_9268457 AB384991 AK307832 AK312482 AB209614	165618	-	TSC_hg19_v1_chr12_-_9268510 M11313 BC040071 AY591530	165655	-	NM_001207024|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##NM_002355|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK291143|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##M16985|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK222792|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##BC024206|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AK312689|M6PR|4074|mannose-6-phosphate receptor (cation dependent)##AB209063|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##AK293893|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##NM_004426|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC073964|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##U89277|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##BC157850|PHC1|1911|polyhomeotic homolog 1 (Drosophila)##AK316337|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##BC012621|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AK301367|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF081675|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF097358|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##NM_005810|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AF034952|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##DQ892820|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##DQ896066|KLRG1|10219|killer cell lectin-like receptor subfamily G, member 1##AK307832|A2M|2|alpha-2-macroglobulin##AK312482|A2M|2|alpha-2-macroglobulin##AB209614|A2M|2|alpha-2-macroglobulin##M11313|A2M|2|alpha-2-macroglobulin##BC040071|A2M|2|alpha-2-macroglobulin##AY591530|A2M|2|alpha-2-macroglobulin	0.0	
chr13	33837319	33837406	reg1043766.p1	3.485	+	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-57198	-	AY082590 BC046563 NM_001243466 NM_178007	-77147	-	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-246839	+	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	22505	-	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	87406	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	413573	-	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.877834	CTCF.p2:7:0.878
chr16	50661548	50661635	reg1031987.p1	3.485	+	TSC_hg19_v1_chr16_-_50647562 AK124375	-14013	-	TSC_hg19_v1_chr16_+_50582303 BC051288 NM_033119 AK314930 AY061883 AF358135 AB062886	-79265	+	AB527472 AF213969 AF152604 AJ271881 TSC_hg19_v1_chr16_-_50402868 BC050728 NM_001173984 NM_013263 BC094706	-258761	-	BC119626 AY302441 TSC_hg19_v1_chr16_-_50715230 BC063423 BC027944 AK292650 AK055837 AK292705	53586	-	TSC_hg19_v1_chr16_-_50715246 NM_001144972 NM_153337 NM_182854	53710	-	AF178930 AY187243 NM_022162 AY187244 AY187246 AB527390	69510	+	BC051288|NKD1|85407|naked cuticle homolog 1 (Drosophila)##NM_033119|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AK314930|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AY061883|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF358135|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AB062886|NKD1|85407|naked cuticle homolog 1 (Drosophila)##AF213969|BRD7|29117|bromodomain containing 7##AF152604|BRD7|29117|bromodomain containing 7##AJ271881|BRD7|29117|bromodomain containing 7##BC050728|BRD7|29117|bromodomain containing 7##NM_001173984|BRD7|29117|bromodomain containing 7##NM_013263|BRD7|29117|bromodomain containing 7##BC094706|BRD7|29117|bromodomain containing 7##BC119626|SNX20|124460|sorting nexin 20##AY302441|SNX20|124460|sorting nexin 20##BC063423|SNX20|124460|sorting nexin 20##BC027944|SNX20|124460|sorting nexin 20##AK292650|SNX20|124460|sorting nexin 20##AK055837|SNX20|124460|sorting nexin 20##AK292705|SNX20|124460|sorting nexin 20##NM_001144972|SNX20|124460|sorting nexin 20##NM_153337|SNX20|124460|sorting nexin 20##NM_182854|SNX20|124460|sorting nexin 20##AF178930|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187243|NOD2|64127|nucleotide-binding oligomerization domain containing 2##NM_022162|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187244|NOD2|64127|nucleotide-binding oligomerization domain containing 2##AY187246|NOD2|64127|nucleotide-binding oligomerization domain containing 2	0.172432	
chr17	57905453	57905530	reg1035484.p1	3.485	+	TSC_hg19_v1_chr17_+_57785080 AK293664	-120418	+	AK294854 TSC_hg19_v1_chr17_+_57785025 AF214006 AX775965	-120456	+	BC009758 TSC_hg19_v1_chr17_+_57785014 AK024969	-120475	+	TSC_hg19_v1_chr17_+_57915291 AK310806	9815	+	AK024096 AK298492 AK301312 BC000258 AK022771 AK315172 NM_001193609 NM_001193610 NM_001193611 NM_001193612 NM_001193613 NM_016261	64700	-	NM_003161 BC036033 TSC_hg19_v1_chr17_+_57970481 AK293247	64971	+	AK293664|VMP1|81671|vacuole membrane protein 1##AK294854|VMP1|81671|vacuole membrane protein 1##AF214006|VMP1|81671|vacuole membrane protein 1##AX775965|VMP1|81671|vacuole membrane protein 1##BC009758|VMP1|81671|vacuole membrane protein 1##AK024969|VMP1|81671|vacuole membrane protein 1##AK024096|TUBD1|51174|tubulin, delta 1##AK298492|TUBD1|51174|tubulin, delta 1##AK301312|TUBD1|51174|tubulin, delta 1##BC000258|TUBD1|51174|tubulin, delta 1##AK022771|TUBD1|51174|tubulin, delta 1##AK315172|TUBD1|51174|tubulin, delta 1##NM_001193609|TUBD1|51174|tubulin, delta 1##NM_001193610|TUBD1|51174|tubulin, delta 1##NM_001193611|TUBD1|51174|tubulin, delta 1##NM_001193612|TUBD1|51174|tubulin, delta 1##NM_001193613|TUBD1|51174|tubulin, delta 1##NM_016261|TUBD1|51174|tubulin, delta 1##NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	0.0	
chr18	57590904	57590970	reg1035080.p2	3.485	+	NM_021127 TSC_hg19_v1_chr18_+_57567227 AK311943 D90070 BC032663 BC013120	-23708	+	NM_133459 TSC_hg19_v1_chr18_-_57364656	-226287	-	TSC_hg19_v1_chr18_-_57364576 AB384657 AY358347 AB075863	-226346	-	AK314130 NM_005912	449063	-	AF217289 BC101047 BC101048 BC101049 NM_031891	1566837	+	AK096495 NM_173557	1969366	-	NM_021127|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##AK311943|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##D90070|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC032663|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##BC013120|PMAIP1|5366|phorbol-12-myristate-13-acetate-induced protein 1##NM_133459|CCBE1|147372|collagen and calcium binding EGF domains 1##AY358347|CCBE1|147372|collagen and calcium binding EGF domains 1##AB075863|CCBE1|147372|collagen and calcium binding EGF domains 1##AK314130|MC4R|4160|melanocortin 4 receptor##NM_005912|MC4R|4160|melanocortin 4 receptor##AF217289|CDH20|28316|cadherin 20, type 2##BC101047|CDH20|28316|cadherin 20, type 2##BC101048|CDH20|28316|cadherin 20, type 2##BC101049|CDH20|28316|cadherin 20, type 2##NM_031891|CDH20|28316|cadherin 20, type 2##AK096495|RNF152|220441|ring finger protein 152##NM_173557|RNF152|220441|ring finger protein 152	0.0	
chr1	9129730	9129910	reg1040258.p1	3.485	+	TSC_hg19_v1_chr1_-_9129695 M55531 AK290398 AK294368 NM_001135585 NM_003039	-44	-	TSC_hg19_v1_chr1_-_9129644 AK289849 BC001692 BC001820 AK295785 BC035878	-179	-	TSC_hg19_v1_chr1_-_9129605 DQ892291 DQ895491 CU674838 AK300091	-221	-	DQ892804 DQ896051 TSC_hg19_v1_chr1_-_9189169 AK022194 AK292888 AK304154 AY768808 NM_024980 BC094733 BC018691	59401	-	TSC_hg19_v1_chr1_+_9294832 BC081559	164995	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	165097	+	M55531|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK290398|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK294368|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_001135585|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##NM_003039|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK289849|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001692|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC001820|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK295785|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##BC035878|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892291|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ895491|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK300091|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892804|GPR157|80045|G protein-coupled receptor 157##DQ896051|GPR157|80045|G protein-coupled receptor 157##AK022194|GPR157|80045|G protein-coupled receptor 157##AK292888|GPR157|80045|G protein-coupled receptor 157##AK304154|GPR157|80045|G protein-coupled receptor 157##AY768808|GPR157|80045|G protein-coupled receptor 157##NM_024980|GPR157|80045|G protein-coupled receptor 157##BC018691|GPR157|80045|G protein-coupled receptor 157##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	0.312857	CTCF.p2:5:0.313
chr20	17840301	17840428	reg1041824.p2	3.485	+	BC054871 NM_001014977 NM_178477 BC062735	-159766	+	NM_001159495	-166045	+	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	-177481	-	BT007191 AB464237 TSC_hg19_v1_chr20_-_17949155 AK223308 AK001793 AK129505 NM_014426 BC093623 BC093980 BC143274	108850	-	TSC_hg19_v1_chr20_-_17949438 BC002724 BC062638 BC064555 BC073171 AK123903 AK308017 AK296947 BC000100 AF121855 NM_152227	109076	-	TSC_hg19_v1_chr20_+_17949742 AF306686 AK315532 AF306684 AF306685 AK027503 BC016869 NM_052865	109298	+	BC054871|BANF2|140836|barrier to autointegration factor 2##NM_001014977|BANF2|140836|barrier to autointegration factor 2##NM_178477|BANF2|140836|barrier to autointegration factor 2##BC062735|BANF2|140836|barrier to autointegration factor 2##NM_001159495|BANF2|140836|barrier to autointegration factor 2##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BT007191|SNX5|27131|sorting nexin 5##AK223308|SNX5|27131|sorting nexin 5##AK001793|SNX5|27131|sorting nexin 5##AK129505|SNX5|27131|sorting nexin 5##NM_014426|SNX5|27131|sorting nexin 5##BC093623|SNX5|27131|sorting nexin 5##BC093980|SNX5|27131|sorting nexin 5##BC143274|SNX5|27131|sorting nexin 5##BC002724|SNX5|27131|sorting nexin 5##BC062638|SNX5|27131|sorting nexin 5##AK123903|SNX5|27131|sorting nexin 5##AK308017|SNX5|27131|sorting nexin 5##AK296947|SNX5|27131|sorting nexin 5##BC000100|SNX5|27131|sorting nexin 5##AF121855|SNX5|27131|sorting nexin 5##NM_152227|SNX5|27131|sorting nexin 5##AF306686|C20orf72|92667|chromosome 20 open reading frame 72##AK315532|C20orf72|92667|chromosome 20 open reading frame 72##AF306684|C20orf72|92667|chromosome 20 open reading frame 72##AF306685|C20orf72|92667|chromosome 20 open reading frame 72##AK027503|C20orf72|92667|chromosome 20 open reading frame 72##BC016869|C20orf72|92667|chromosome 20 open reading frame 72##NM_052865|C20orf72|92667|chromosome 20 open reading frame 72	0.019337	
chr21	45341841	45342021	reg1039117.p2	3.485	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	-56808	+	TSC_hg19_v1_chr21_+_45285029 AY358704	-56871	+	TSC_hg19_v1_chr21_+_45209457 AK223185 AK303000 AK223215 AK313116 BC000380 U79775 CU674182 DQ891391 DQ894567 BC014787	-132446	+	AK300562 NM_001037553	3347	+	TSC_hg19_v1_chr21_+_45432211 BC071569 NM_003274 U61500 BC046241 BC052247 BC094823 U19252 BC101728 AB385171 CU692332	90409	+	TSC_hg19_v1_chr21_+_45527202 AK314184	185271	+	NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AK223185|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK303000|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK223215|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK313116|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC000380|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##U79775|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ891391|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ894567|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC014787|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC071569|TRAPPC10|7109|trafficking protein particle complex 10##NM_003274|TRAPPC10|7109|trafficking protein particle complex 10##U61500|TRAPPC10|7109|trafficking protein particle complex 10##BC046241|TRAPPC10|7109|trafficking protein particle complex 10##BC052247|TRAPPC10|7109|trafficking protein particle complex 10##BC094823|TRAPPC10|7109|trafficking protein particle complex 10##U19252|TRAPPC10|7109|trafficking protein particle complex 10##BC101728|TRAPPC10|7109|trafficking protein particle complex 10##AK314184|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)	0.0	
chr22	23190864	23190947	reg1004050.p2	3.485	+	X62125 TSC_hg19_v1_chr22_+_23165276 AK129603 BC071804 BC033102 CU689610 L03633 HM996064 HM996172 AF124174 AF194540 AF194541 AF194542 AF194543 AF194544 AF194545 AF194546 AF194547 AF194548 AF194549 AF194550 AF194551 AF194552 AF194553 AF194554 AF194555 AF194556 AF194557 AF194558 AF194559 AF194560 AF194561 AF194562 AF194563 AF194564 AF194565 AF194566 AF194567 AF194568 AF194569 AF194570 AF194571 AF194572 AF194573 AF194574 AF194575 AF194576 AF194577 AJ388658 AJ697911 AM181371 AM183998 AM184000 AM184018 AY685383 AY942038 DQ098709 DQ098711 DQ098766 DQ098772 DQ098775 DQ098778 DQ098782 DQ322816 DQ322984 DQ322992 EF589387 EF589498 EF589544 GU086862 L26532 Y09387 AM184068 DQ098712 DQ098779 AJ399866 AY050712 DQ322899 DQ322900 DQ322979 L21956 S67988 AY950800 U09888 U09892 Y08149 AF103683 AF044486 AY962389 AF092503 AJ408283 DQ098753 Z46858 DQ098738 DQ098739 DQ098762 L38428 DQ098710 AF103704 AF103701 AF103718 AF490954 AF490947 AF103709 AF103640 AF103644 AF103645 AF103647 AF103697 AF103698 AF103700 U87151	-25510	+	TSC_hg19_v1_chr22_+_23154240 L29158 L29159 L29160 L29161 L29164 BC032452 BC089414 AY190827 X57810 L26902	-36630	+	AK130461 TSC_hg19_v1_chr22_+_23134980 BC030983 AY172960 CU689066 L03628 HM996388 FJ385443 AF336988 AB063978 AF194578 AF194579 AF462664 AM181367 AM183999 AM184016 AM184069 AY043153 AY043162 AY485364 D84140 D84141 DQ098759 DQ109967 DQ490733 DQ840953 DQ841099 FJ385525 L03630 U38662 U76676 X87894 DQ098783 M98325 AF103614 DQ098785 DQ098825 DQ098752 AF490947 FJ385558 S66100	-55799	+	TSC_hg19_v1_chr22_+_23213675 BC020236 CU676520	22788	+	TSC_hg19_v1_chr22_+_23222900 AK127411 S77601 X57802 X57803 X57816 X57818 AB369252 AF026919 AF026925 AY190825 L26400 AF490955 AF490961	32024	+	AJ318021 AJ318022 NM_001178126 AJ319670 BC012159 AJ319671 AJ319669	39178	+	BC020236|IGLV4-3|28786|immunoglobulin lambda variable 4-3##AB369252|CYAT1|100290481|immunoglobulin lambda light chain-like##AJ318021|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ318022|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##NM_001178126|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319670|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##BC012159|IGLC1|3537|immunoglobulin lambda constant 1 (Mcg marker)##AJ319671|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5##AJ319669|IGLL5|100423062|immunoglobulin lambda-like polypeptide 5	0.0	
chr22	25575377	25575462	reg1034610.p2	3.485	+	BC171801 NM_001145206	-151479	+	BC130647 BC130649 CR456388 NM_001001663	-240107	-	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-373209	+	TSC_hg19_v1_chr22_+_25591072 AK025418	15710	+	NM_004076 U71216 BC069479 BC102021 BC102022 BC107482 CR456427	20425	+	NM_000496	40192	+	BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AK025418|KIAA1671|85379|KIAA1671##NM_004076|CRYBB3|1417|crystallin, beta B3##U71216|CRYBB3|1417|crystallin, beta B3##BC069479|CRYBB3|1417|crystallin, beta B3##BC102021|CRYBB3|1417|crystallin, beta B3##BC102022|CRYBB3|1417|crystallin, beta B3##BC107482|CRYBB3|1417|crystallin, beta B3##CR456427|CRYBB3|1417|crystallin, beta B3##NM_000496|CRYBB2|1415|crystallin, beta B2	0.014858	
chr2	54403760	54403849	reg1022421.p1	3.485	+	NM_138448 AK307096 BC012290 X84195 TSC_hg19_v1_chr2_+_54342769	-61210	+	TSC_hg19_v1_chr2_-_54198154 AB621805	-205672	-	D38521 TSC_hg19_v1_chr2_-_54197945 AY894756 AY894754 AY894755 NM_014614	-205923	-	BC068576 AK097417 NM_001003937	79571	-	AK097617 NM_001100396 BC126244 BC126246 BC144191 BC144192 BC031669	154284	+	TSC_hg19_v1_chr2_+_54683463 NM_003128 AB371586 AB209748	279808	+	NM_138448|ACYP2|98|acylphosphatase 2, muscle type##AK307096|ACYP2|98|acylphosphatase 2, muscle type##BC012290|ACYP2|98|acylphosphatase 2, muscle type##X84195|ACYP2|98|acylphosphatase 2, muscle type##D38521|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894756|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894754|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##AY894755|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##NM_014614|PSME4|23198|proteasome (prosome, macropain) activator subunit 4##BC068576|TSPYL6|388951|TSPY-like 6##AK097417|TSPYL6|388951|TSPY-like 6##NM_001003937|TSPYL6|388951|TSPY-like 6##AK097617|C2orf73|129852|chromosome 2 open reading frame 73##NM_001100396|C2orf73|129852|chromosome 2 open reading frame 73##BC126244|C2orf73|129852|chromosome 2 open reading frame 73##BC126246|C2orf73|129852|chromosome 2 open reading frame 73##BC144191|C2orf73|129852|chromosome 2 open reading frame 73##BC144192|C2orf73|129852|chromosome 2 open reading frame 73##BC031669|C2orf73|129852|chromosome 2 open reading frame 73##NM_003128|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB371586|SPTBN1|6711|spectrin, beta, non-erythrocytic 1##AB209748|SPTBN1|6711|spectrin, beta, non-erythrocytic 1	0.870546	
chr8	130951881	130952001	reg1033974.p1	3.485	+	BC003599 TSC_hg19_v1_chr8_-_130951934	-26	-	AB042405 NM_031415	-152808	-	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-2145158	+	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	65	-	BC016345 TSC_hg19_v1_chr8_-_131028667	76718	-	TSC_hg19_v1_chr8_-_131028699 AK002059	76753	-	BC003599|FAM49B|51571|family with sequence similarity 49, member B##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B##BC016345|FAM49B|51571|family with sequence similarity 49, member B##AK002059|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr1	225069482	225069549	reg1037921.p2	3.484	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-265336	+	AB209887 NM_001115113 NM_025160	-447515	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-447755	-	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	47850	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	546214	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	546286	-	AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor	0.0	
chr17	40912227	40912307	reg1040540.p1	3.484	+	TSC_hg19_v1_chr17_-_40897056 BC015882 AK299887 AK295853 AK304835 AK309121 AK310399 AK311237 AL833159 AK295626 NM_001991	-15189	-	TSC_hg19_v1_chr17_+_40834578 NM_003632 U87223 BC171797 AB384696	-77559	+	AF208237 AY429103 EU832758 GQ129298 AF215981 BC098132 BC098157 BC098304 BC099840 NM_016602	-78425	-	BC034924 TSC_hg19_v1_chr17_-_40913104 BC001607 BC041021	807	-	AK057121 TSC_hg19_v1_chr17_-_40913137	870	-	AJ001015 NM_005854 TSC_hg19_v1_chr17_+_40913215	946	+	BC015882|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK299887|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK295853|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK304835|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK309121|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK310399|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK311237|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AL833159|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##AK295626|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##NM_001991|EZH1|2145|enhancer of zeste homolog 1 (Drosophila)##NM_003632|CNTNAP1|8506|contactin associated protein 1##U87223|CNTNAP1|8506|contactin associated protein 1##BC171797|CNTNAP1|8506|contactin associated protein 1##AF208237|CCR10|2826|chemokine (C-C motif) receptor 10##AY429103|CCR10|2826|chemokine (C-C motif) receptor 10##EU832758|CCR10|2826|chemokine (C-C motif) receptor 10##GQ129298|CCR10|2826|chemokine (C-C motif) receptor 10##AF215981|CCR10|2826|chemokine (C-C motif) receptor 10##BC098132|CCR10|2826|chemokine (C-C motif) receptor 10##BC098157|CCR10|2826|chemokine (C-C motif) receptor 10##BC098304|CCR10|2826|chemokine (C-C motif) receptor 10##BC099840|CCR10|2826|chemokine (C-C motif) receptor 10##NM_016602|CCR10|2826|chemokine (C-C motif) receptor 10##BC034924|LOC100190938|100190938|uncharacterized LOC100190938##BC001607|LOC100190938|100190938|uncharacterized LOC100190938##BC041021|LOC100190938|100190938|uncharacterized LOC100190938##AK057121|LOC100190938|100190938|uncharacterized LOC100190938##AJ001015|RAMP2|10266|receptor (G protein-coupled) activity modifying protein 2##NM_005854|RAMP2|10266|receptor (G protein-coupled) activity modifying protein 2	0.0	
chr21	37682281	37682362	reg1029430.p1	3.484	+	AJ237839 NM_005128	-145483	+	TSC_hg19_v1_chr21_-_37528616 AB004851 BC037580 BC047014	-153690	-	AB041012 NM_001236 AB124847 TSC_hg19_v1_chr21_+_37507383 AK223429 BC002812 AB004854 CR541709	-174972	+	TSC_hg19_v1_chr21_+_37692548 BC058002 NM_015358 AK295133 BC007311 D50926 BC094779 BC132731 BC144116 AK292957 AB489143	10198	+	TSC_hg19_v1_chr21_+_37757689 NM_005441 AK313152 BC001143	75369	+	BC012126 NM_012130 AY355349	156410	-	AJ237839|DOPEY2|9980|dopey family member 2##NM_005128|DOPEY2|9980|dopey family member 2##AB004851|LOC100506428|100506428|uncharacterized LOC100506428##BC037580|LOC100506428|100506428|uncharacterized LOC100506428##BC047014|LOC100506428|100506428|uncharacterized LOC100506428##AB041012|CBR3|874|carbonyl reductase 3##NM_001236|CBR3|874|carbonyl reductase 3##AB124847|CBR3|874|carbonyl reductase 3##AK223429|CBR3|874|carbonyl reductase 3##BC002812|CBR3|874|carbonyl reductase 3##AB004854|CBR3|874|carbonyl reductase 3##CR541709|CBR3|874|carbonyl reductase 3##BC058002|MORC3|23515|MORC family CW-type zinc finger 3##NM_015358|MORC3|23515|MORC family CW-type zinc finger 3##AK295133|MORC3|23515|MORC family CW-type zinc finger 3##BC007311|MORC3|23515|MORC family CW-type zinc finger 3##D50926|MORC3|23515|MORC family CW-type zinc finger 3##BC094779|MORC3|23515|MORC family CW-type zinc finger 3##BC132731|MORC3|23515|MORC family CW-type zinc finger 3##BC144116|MORC3|23515|MORC family CW-type zinc finger 3##AK292957|MORC3|23515|MORC family CW-type zinc finger 3##NM_005441|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##AK313152|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC001143|CHAF1B|8208|chromatin assembly factor 1, subunit B (p60)##BC012126|CLDN14|23562|claudin 14##NM_012130|CLDN14|23562|claudin 14##AY355349|CLDN14|23562|claudin 14	0.0	
chr22	17718037	17718163	reg1038358.p1	3.484	+	AK314321 TSC_hg19_v1_chr22_-_17700267 AK295174 AK292689	-17737	-	AF190746 NM_017424	-27322	-	TSC_hg19_v1_chr22_-_17680487 AK027682 AK074702 NM_177405	-37586	-	TSC_hg19_v1_chr22_-_17747522 AF277398	29471	-	TSC_hg19_v1_chr22_+_18043149 AJ428203 AY008285 NM_031481 BC031644 AK308974 AK095706 AK309110	325119	+	BT007128 CU012943 CU013231 EU831478 EU831565 AB528072 CR456385 X71491 TSC_hg19_v1_chr22_-_18111488 X76228 BC004443	393345	-	AK314321|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK295174|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK292689|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF190746|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_017424|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK027682|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AK074702|CECR1|51816|cat eye syndrome chromosome region, candidate 1##NM_177405|CECR1|51816|cat eye syndrome chromosome region, candidate 1##AF277398|CECR3|27442|cat eye syndrome chromosome region, candidate 3 (non-protein coding)##AJ428203|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AY008285|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##NM_031481|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BC031644|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK308974|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK095706|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##AK309110|SLC25A18|83733|solute carrier family 25 (mitochondrial carrier), member 18##BT007128|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU012943|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CU013231|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831478|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##EU831565|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##CR456385|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X71491|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##X76228|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1##BC004443|ATP6V1E1|529|ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E1	0.0	
chr3	150308613	150308700	reg1030266.p1	3.484	+	TSC_hg19_v1_chr3_+_150264579 BX647951 AL833101 BC011885 AF497978 AB590213 DQ896788 EU176412 AF172818	-44070	+	AF212241 AK298586 TSC_hg19_v1_chr3_+_150264573 AK027356 AK293993 NM_032025	-44112	+	TSC_hg19_v1_chr3_-_150264284 AK093929 AF136975 AK098135 AK090933 NM_014445	-44303	-	BC039424 AK125413 TSC_hg19_v1_chr3_-_150321004	12320	-	NM_016275 TSC_hg19_v1_chr3_+_150321107 BC006012 AK300315 BC026350 AK075006 AY358095 AF195141 BC008411 BC009611 AY358096 AF131856 BC071699 BC036738 BC009556 CU679417 CU693228 CU691400	12499	+	AK093375 AX748085 BC036239 BC029577 NM_152394	113073	-	BX647951|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AL833101|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##BC011885|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AF497978|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##DQ896788|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##EU176412|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AF172818|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AF212241|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AK298586|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AK027356|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AK293993|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##NM_032025|EIF2A|83939|eukaryotic translation initiation factor 2A, 65kDa##AK093929|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AF136975|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AK098135|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AK090933|SERP1|27230|stress-associated endoplasmic reticulum protein 1##NM_014445|SERP1|27230|stress-associated endoplasmic reticulum protein 1##AK125413|SERP1|27230|stress-associated endoplasmic reticulum protein 1##NM_016275|SELT|51714|selenoprotein T##BC006012|SELT|51714|selenoprotein T##AK300315|SELT|51714|selenoprotein T##BC026350|SELT|51714|selenoprotein T##AK075006|SELT|51714|selenoprotein T##AY358095|SELT|51714|selenoprotein T##AF195141|SELT|51714|selenoprotein T##BC008411|SELT|51714|selenoprotein T##BC009611|SELT|51714|selenoprotein T##AY358096|SELT|51714|selenoprotein T##AF131856|SELT|51714|selenoprotein T##BC071699|SELT|51714|selenoprotein T##BC036738|SELT|51714|selenoprotein T##BC009556|SELT|51714|selenoprotein T##AK093375|FAM194A|131831|family with sequence similarity 194, member A##BC036239|FAM194A|131831|family with sequence similarity 194, member A##BC029577|FAM194A|131831|family with sequence similarity 194, member A##NM_152394|FAM194A|131831|family with sequence similarity 194, member A	0.368591	CTCF.p2:-23:0.369
chr3	196185069	196185141	reg1040784.p2	3.484	+	TSC_hg19_v1_chr3_-_196159304 NM_015562	-25772	-	TSC_hg19_v1_chr3_-_196159299 AK026451 AK129880 AK303630 AK308699 AK307899	-25806	-	AB018337 TSC_hg19_v1_chr3_-_196159295 BC047420	-25822	-	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	45473	-	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	57108	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	110285	-	NM_015562|UBXN7|26043|UBX domain protein 7##AK026451|UBXN7|26043|UBX domain protein 7##AK129880|UBXN7|26043|UBX domain protein 7##AK303630|UBXN7|26043|UBX domain protein 7##AK308699|UBXN7|26043|UBX domain protein 7##AK307899|UBXN7|26043|UBX domain protein 7##AB018337|UBXN7|26043|UBX domain protein 7##BC047420|UBXN7|26043|UBX domain protein 7##BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53	0.0	
chr4	15799548	15799620	reg1038014.p1	3.484	+	TSC_hg19_v1_chr4_+_15779950 AK303169 NM_001775 D84276 AK313268 M34461 BC007964 D84277 DQ893184 EU176777 AK297592	-19613	+	TSC_hg19_v1_chr4_+_15704753 AB175627 AB590680 BT019502	-94825	+	TSC_hg19_v1_chr4_+_15704695 AK312497 BC012095	-94889	+	BC003628 M60047 BC008910 BC018852 AK291307 TSC_hg19_v1_chr4_-_15939972	140376	-	NM_005130	140778	-	AF361936 CU693032 DQ892062 DQ895256 AB529223 BC025720 AB021123 AY358978 NM_031950	165220	-	AK303169|CD38|952|CD38 molecule##NM_001775|CD38|952|CD38 molecule##D84276|CD38|952|CD38 molecule##AK313268|CD38|952|CD38 molecule##M34461|CD38|952|CD38 molecule##BC007964|CD38|952|CD38 molecule##D84277|CD38|952|CD38 molecule##DQ893184|CD38|952|CD38 molecule##EU176777|CD38|952|CD38 molecule##AK297592|CD38|952|CD38 molecule##AB175627|BST1|683|bone marrow stromal cell antigen 1##BT019502|BST1|683|bone marrow stromal cell antigen 1##AK312497|BST1|683|bone marrow stromal cell antigen 1##BC012095|BST1|683|bone marrow stromal cell antigen 1##BC003628|FGFBP1|9982|fibroblast growth factor binding protein 1##M60047|FGFBP1|9982|fibroblast growth factor binding protein 1##BC008910|FGFBP1|9982|fibroblast growth factor binding protein 1##BC018852|FGFBP1|9982|fibroblast growth factor binding protein 1##AK291307|FGFBP1|9982|fibroblast growth factor binding protein 1##NM_005130|FGFBP1|9982|fibroblast growth factor binding protein 1##AF361936|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ892062|FGFBP2|83888|fibroblast growth factor binding protein 2##DQ895256|FGFBP2|83888|fibroblast growth factor binding protein 2##BC025720|FGFBP2|83888|fibroblast growth factor binding protein 2##AB021123|FGFBP2|83888|fibroblast growth factor binding protein 2##AY358978|FGFBP2|83888|fibroblast growth factor binding protein 2##NM_031950|FGFBP2|83888|fibroblast growth factor binding protein 2	0.0	
chr5	140855605	140855786	reg1006571.p2	3.484	+	TSC_hg19_v1_chr5_+_140855606 AF152337 AF152524 CU675407 CU676422 CU693162 DQ893469 DQ896354	-52	+	TSC_hg19_v1_chr5_+_140855552 BC006439 NM_002588 NM_032402 NM_032403 BC019299 BC027451 L11373 BC026218 BC063437	-129	+	AF152321 AF152506 TSC_hg19_v1_chr5_+_140810427	-45299	+	TSC_hg19_v1_chr5_+_140864626 BC042650 AF152338 AF152525 BC101035 BC101037 BC101038 NM_018928 NM_032406 BC101036	8989	+	TSC_hg19_v1_chr5_+_140868721 BC112081 BC112083 AF152339 AF152526 NM_018929 NM_032407	13069	+	AL050086 TSC_hg19_v1_chr5_-_140895550	39787	-	AF152337|PCDHGC3|5098|protocadherin gamma subfamily C, 3##AF152524|PCDHGC3|5098|protocadherin gamma subfamily C, 3##DQ893469|PCDHGC3|5098|protocadherin gamma subfamily C, 3##DQ896354|PCDHGC3|5098|protocadherin gamma subfamily C, 3##BC006439|PCDHGC3|5098|protocadherin gamma subfamily C, 3##NM_002588|PCDHGC3|5098|protocadherin gamma subfamily C, 3##NM_032402|PCDHGC3|5098|protocadherin gamma subfamily C, 3##NM_032403|PCDHGC3|5098|protocadherin gamma subfamily C, 3##BC019299|PCDHGC3|5098|protocadherin gamma subfamily C, 3##BC027451|PCDHGC3|5098|protocadherin gamma subfamily C, 3##L11373|PCDHGC3|5098|protocadherin gamma subfamily C, 3##BC026218|PCDHGC3|5098|protocadherin gamma subfamily C, 3##BC063437|PCDHGC3|5098|protocadherin gamma subfamily C, 3##AF152321|PCDHGA12|26025|protocadherin gamma subfamily A, 12##AF152506|PCDHGA12|26025|protocadherin gamma subfamily A, 12##BC042650|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152338|PCDHGC4|56098|protocadherin gamma subfamily C, 4##AF152525|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101035|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101038|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_018928|PCDHGC4|56098|protocadherin gamma subfamily C, 4##NM_032406|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC101036|PCDHGC4|56098|protocadherin gamma subfamily C, 4##BC112081|PCDHGC5|56097|protocadherin gamma subfamily C, 5##BC112083|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152339|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AF152526|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_018929|PCDHGC5|56097|protocadherin gamma subfamily C, 5##NM_032407|PCDHGC5|56097|protocadherin gamma subfamily C, 5##AL050086|DIAPH1|1729|diaphanous homolog 1 (Drosophila)	0.0	
chr7	99097897	99098050	reg1036974.p2	3.484	+	TSC_hg19_v1_chr7_-_99097910 AK022360 AY261374	-58	-	AB527469 CU690858 EU446676 TSC_hg19_v1_chr7_-_99097899 AK222948 BC051847 NM_032164 BC017051 AJ297365 AK172865 BC062588 AY642122 BC025241	-162	-	TSC_hg19_v1_chr7_+_99070534 BC089424 BC050286 BX648360	-27373	+	NM_145102 AF170025 BC030790	4311	+	NM_014569 TSC_hg19_v1_chr7_+_99102599	4612	+	TSC_hg19_v1_chr7_+_99102612 AK027714 BC015622 AB023232	4643	+	AK022360|ZNF394|84124|zinc finger protein 394##EU446676|ZNF394|84124|zinc finger protein 394##AK222948|ZNF394|84124|zinc finger protein 394##BC051847|ZNF394|84124|zinc finger protein 394##NM_032164|ZNF394|84124|zinc finger protein 394##BC017051|ZNF394|84124|zinc finger protein 394##AJ297365|ZNF394|84124|zinc finger protein 394##AK172865|ZNF394|84124|zinc finger protein 394##AY642122|ZNF394|84124|zinc finger protein 394##BC025241|ZNF394|84124|zinc finger protein 394##BC089424|ZNF789|285989|zinc finger protein 789##BC050286|ZNF789|285989|zinc finger protein 789##BX648360|ZNF789|285989|zinc finger protein 789##NM_145102|ZKSCAN5|23660|zinc finger with KRAB and SCAN domains 5##AF170025|ZKSCAN5|23660|zinc finger with KRAB and SCAN domains 5##BC030790|ZKSCAN5|23660|zinc finger with KRAB and SCAN domains 5##NM_014569|ZKSCAN5|23660|zinc finger with KRAB and SCAN domains 5##AK027714|ZKSCAN5|23660|zinc finger with KRAB and SCAN domains 5##AB023232|ZKSCAN5|23660|zinc finger with KRAB and SCAN domains 5	0.0	
chr11	25575873	25576047	reg1043103.p2	3.483	+	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	-1057311	+	NM_001195637	-2693989	-	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-2724615	-	NM_031418 AK302659	777770	+	AK128337 AJ417818 AJ507429 BC058007 AY358668 BC020912 NM_001135091 NM_001135092 NM_145650	1017780	-	BC049207 NM_178498	1167599	-	AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3##AK128337|MUC15|143662|mucin 15, cell surface associated##AJ417818|MUC15|143662|mucin 15, cell surface associated##AJ507429|MUC15|143662|mucin 15, cell surface associated##BC058007|MUC15|143662|mucin 15, cell surface associated##AY358668|MUC15|143662|mucin 15, cell surface associated##BC020912|MUC15|143662|mucin 15, cell surface associated##NM_001135091|MUC15|143662|mucin 15, cell surface associated##NM_001135092|MUC15|143662|mucin 15, cell surface associated##NM_145650|MUC15|143662|mucin 15, cell surface associated##BC049207|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12##NM_178498|SLC5A12|159963|solute carrier family 5 (sodium/glucose cotransporter), member 12	0.0	
chr1	39973016	39973139	reg1041783.p1	3.483	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	-15732	+	TSC_hg19_v1_chr1_+_39922264 AK023821	-50758	+	NM_015038	-97902	+	BC029969 TSC_hg19_v1_chr1_-_40042150	69034	-	U75686 BC065540 TSC_hg19_v1_chr1_-_40042460 BC071591	69360	-	BC094755 TSC_hg19_v1_chr1_-_40042463	69399	-	AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a##AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##NM_015038|KIAA0754|643314|KIAA0754##BC029969|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##U75686|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC065540|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC071591|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC094755|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)	0.44459	CTCF.p2:-17:0.445
chr14	71180524	71180704	reg1005225.p1	3.483	+	TSC_hg19_v1_chr14_+_71108629 D86980 NM_015351 BC047950 AB464295	-72005	+	AK223346 AK290647 AK300417 AK300460 AK304361 TSC_hg19_v1_chr14_-_71067373 AF074723 BC004106 AK222587 NM_005466	-113237	-	AB463868 BT006831 CR541697 TSC_hg19_v1_chr14_-_71067367	-113254	-	AF251442 TSC_hg19_v1_chr14_-_71275778 BC111407 AY327900 BC133706 NM_033141	95195	-	TSC_hg19_v1_chr14_+_71374143 AB023212 AF233450 BC152474 BC167161 NM_014982	193519	+	TSC_hg19_v1_chr14_+_71374441 BC140784	193837	+	D86980|TTC9|23508|tetratricopeptide repeat domain 9##NM_015351|TTC9|23508|tetratricopeptide repeat domain 9##BC047950|TTC9|23508|tetratricopeptide repeat domain 9##AK223346|MED6|10001|mediator complex subunit 6##AK290647|MED6|10001|mediator complex subunit 6##AK300417|MED6|10001|mediator complex subunit 6##AK300460|MED6|10001|mediator complex subunit 6##AK304361|MED6|10001|mediator complex subunit 6##AF074723|MED6|10001|mediator complex subunit 6##BC004106|MED6|10001|mediator complex subunit 6##AK222587|MED6|10001|mediator complex subunit 6##NM_005466|MED6|10001|mediator complex subunit 6##BT006831|MED6|10001|mediator complex subunit 6##CR541697|MED6|10001|mediator complex subunit 6##AF251442|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC111407|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AY327900|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##BC133706|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##NM_033141|MAP3K9|4293|mitogen-activated protein kinase kinase kinase 9##AB023212|PCNX|22990|pecanex homolog (Drosophila)##AF233450|PCNX|22990|pecanex homolog (Drosophila)##BC152474|PCNX|22990|pecanex homolog (Drosophila)##BC167161|PCNX|22990|pecanex homolog (Drosophila)##NM_014982|PCNX|22990|pecanex homolog (Drosophila)##BC140784|PCNX|22990|pecanex homolog (Drosophila)	0.0	
chr1	66801938	66802119	reg1033639.p2	3.483	+	TSC_hg19_v1_chr1_+_66798096 AK294441	-3933	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	-4175	+	AB209081 NM_001037340 AK290006	-343625	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	197856	+	TSC_hg19_v1_chr1_+_67218141 NM_152665 AK098192	416096	+	TSC_hg19_v1_chr1_+_67218151 BC106885 AK307100 AK307878	416137	+	AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_152665|TCTEX1D1|200132|Tctex1 domain containing 1##AK098192|TCTEX1D1|200132|Tctex1 domain containing 1##BC106885|TCTEX1D1|200132|Tctex1 domain containing 1##AK307100|TCTEX1D1|200132|Tctex1 domain containing 1##AK307878|TCTEX1D1|200132|Tctex1 domain containing 1	0.0	
chr18	60848489	60848623	reg1036107.p2	3.483	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-52621	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-464248	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-464630	+	BC027258 NM_000633 NM_000657	138004	-	TSC_hg19_v1_chr18_-_60986977 X06487	138437	-	TSC_hg19_v1_chr18_-_60987309 M13994	138730	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr19	2622693	2622794	reg1045579.p1	3.483	+	NM_015675 TSC_hg19_v1_chr19_+_2476124 AK293087 AF087853 BC024654 AF078077 BC113466 BC117469 AF090950 HQ258730 AY615270 AY615271 AB528673	-146505	+	TSC_hg19_v1_chr19_-_2456958 NM_032737	-165783	-	TSC_hg19_v1_chr19_-_2456941 BC006551	-165807	-	BC053630 TSC_hg19_v1_chr19_-_2702693 AK311750 BC014466	79952	-	TSC_hg19_v1_chr19_-_2702746 NM_052847	79999	-	AK124445 TSC_hg19_v1_chr19_-_2717420	94606	-	NM_015675|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AK293087|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF087853|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC024654|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF078077|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC113466|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##BC117469|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AF090950|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##HQ258730|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615270|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##AY615271|GADD45B|4616|growth arrest and DNA-damage-inducible, beta##NM_032737|LMNB2|84823|lamin B2##BC006551|LMNB2|84823|lamin B2##BC053630|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK311750|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##BC014466|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##NM_052847|GNG7|2788|guanine nucleotide binding protein (G protein), gamma 7##AK124445|DIRAS1|148252|DIRAS family, GTP-binding RAS-like 1	0.0	
chr20	17629810	17629894	reg1025553.p1	3.483	+	NM_001011546 NM_006870 TSC_hg19_v1_chr20_+_17550756 AK315994 BC009477 AK312645 BX647319 S65738 AK302338	-79113	+	AK316247 BC041483 NM_001161705	-90310	-	AF039655 Y16717 TSC_hg19_v1_chr20_-_17512006 NM_001195	-117860	-	TSC_hg19_v1_chr20_-_17641123 AB287347 AB384598	11284	-	BC128578 BC128577 TSC_hg19_v1_chr20_-_17662793 AF006751	32913	-	TSC_hg19_v1_chr20_-_17662888 AB037819 BC009700 NM_001042576 NM_004587	33031	-	NM_001011546|DSTN|11034|destrin (actin depolymerizing factor)##NM_006870|DSTN|11034|destrin (actin depolymerizing factor)##AK315994|DSTN|11034|destrin (actin depolymerizing factor)##BC009477|DSTN|11034|destrin (actin depolymerizing factor)##AK312645|DSTN|11034|destrin (actin depolymerizing factor)##BX647319|DSTN|11034|destrin (actin depolymerizing factor)##S65738|DSTN|11034|destrin (actin depolymerizing factor)##AK302338|DSTN|11034|destrin (actin depolymerizing factor)##AK316247|BFSP1|631|beaded filament structural protein 1, filensin##BC041483|BFSP1|631|beaded filament structural protein 1, filensin##NM_001161705|BFSP1|631|beaded filament structural protein 1, filensin##AF039655|BFSP1|631|beaded filament structural protein 1, filensin##Y16717|BFSP1|631|beaded filament structural protein 1, filensin##NM_001195|BFSP1|631|beaded filament structural protein 1, filensin##AB287347|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128578|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC128577|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AF006751|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##AB037819|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##BC009700|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_001042576|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)##NM_004587|RRBP1|6238|ribosome binding protein 1 homolog 180kDa (dog)	0.0	
chr21	45627325	45627506	reg1036287.p2	3.483	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-73854	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-73910	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-100116	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	33351	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	33442	-	AF194032 NM_013369 NM_175867	54683	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.0	
chr4	82388835	82389015	reg1003555.p2	3.483	+	AB528214 D70899 NM_006259 X94612	-262718	-	M22491 NM_001201 BC096269 BC096270 BC096271 BC117514	-436783	+	BC034296 NM_001206997 NM_152770 AK128642 AY349359 DQ893197 DQ893198 DQ896152 DQ896153 DQ896154 DQ896534 DQ896535	-1132028	+	TSC_hg19_v1_chr4_-_82392993 BX648337 BC121003 BC121004	4058	-	TSC_hg19_v1_chr4_-_82393062 AK291459 BC036784 AK303625 AK056257 NM_152545	4135	-	D55671 TSC_hg19_v1_chr4_-_83294725	905750	-	D70899|PRKG2|5593|protein kinase, cGMP-dependent, type II##NM_006259|PRKG2|5593|protein kinase, cGMP-dependent, type II##X94612|PRKG2|5593|protein kinase, cGMP-dependent, type II##M22491|BMP3|651|bone morphogenetic protein 3##NM_001201|BMP3|651|bone morphogenetic protein 3##BC096269|BMP3|651|bone morphogenetic protein 3##BC096270|BMP3|651|bone morphogenetic protein 3##BC096271|BMP3|651|bone morphogenetic protein 3##BC117514|BMP3|651|bone morphogenetic protein 3##BC034296|C4orf22|255119|chromosome 4 open reading frame 22##NM_001206997|C4orf22|255119|chromosome 4 open reading frame 22##NM_152770|C4orf22|255119|chromosome 4 open reading frame 22##AK128642|C4orf22|255119|chromosome 4 open reading frame 22##AY349359|C4orf22|255119|chromosome 4 open reading frame 22##DQ893197|C4orf22|255119|chromosome 4 open reading frame 22##DQ893198|C4orf22|255119|chromosome 4 open reading frame 22##DQ896152|C4orf22|255119|chromosome 4 open reading frame 22##DQ896153|C4orf22|255119|chromosome 4 open reading frame 22##DQ896154|C4orf22|255119|chromosome 4 open reading frame 22##DQ896534|C4orf22|255119|chromosome 4 open reading frame 22##DQ896535|C4orf22|255119|chromosome 4 open reading frame 22##BX648337|RASGEF1B|153020|RasGEF domain family, member 1B##BC121003|RASGEF1B|153020|RasGEF domain family, member 1B##BC121004|RASGEF1B|153020|RasGEF domain family, member 1B##AK291459|RASGEF1B|153020|RasGEF domain family, member 1B##BC036784|RASGEF1B|153020|RasGEF domain family, member 1B##AK303625|RASGEF1B|153020|RasGEF domain family, member 1B##AK056257|RASGEF1B|153020|RasGEF domain family, member 1B##NM_152545|RASGEF1B|153020|RasGEF domain family, member 1B##D55671|HNRNPD|3184|heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)	0.0	
chr6	166700455	166700636	reg1026106.p2	3.483	+	BC098425 NM_003181	-118416	-	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	-299011	-	TSC_hg19_v1_chr6_-_166401424 AK289375	-299112	-	BC034775 NM_175922 TSC_hg19_v1_chr6_-_166721880	21331	-	BC018969 NM_145169 TSC_hg19_v1_chr6_-_166756020	55462	-	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	55489	-	BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)##BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##AK289375|LINC00473|90632|long intergenic non-protein coding RNA 473##BC034775|PRR18|285800|proline rich 18##NM_175922|PRR18|285800|proline rich 18##BC018969|SFT2D1|113402|SFT2 domain containing 1##NM_145169|SFT2D1|113402|SFT2 domain containing 1##AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1	0.0	
chr8	22560661	22560770	reg1034320.p1	3.483	+	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	-9931	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	-10210	-	AK294968 AK295834 NM_001199881	-10641	-	AB590982 AY730275 AY037148 BC020779 AY359109 NM_144962	224609	-	AK092617 BC034917 NM_001160036	284208	+	NM_001160037	292645	+	AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##AY730275|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY037148|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC020779|PEBP4|157310|phosphatidylethanolamine-binding protein 4##AY359109|PEBP4|157310|phosphatidylethanolamine-binding protein 4##NM_144962|PEBP4|157310|phosphatidylethanolamine-binding protein 4##BC034917|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160036|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_001160037|RHOBTB2|23221|Rho-related BTB domain containing 2	0.595396	CTCF.p2:-53:0.595
chr11	64637429	64637569	reg1040887.p1	3.482	+	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	-25410	-	AJ297488 AJ297489 NM_130803 NM_130804	-58734	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	-59305	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	8483	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	8655	-	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	9662	-	AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I##AY007161|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1	0.97694	CTCF.p2:-14:0.977
chr1	248852203	248852305	reg1030590.p2	3.482	+	NM_001004734 BC137188 BC137189	-6638	-	NM_001001824	-38070	-	NM_001001827 AB528813	-49695	-	AY358453 TSC_hg19_v1_chr1_-_249120082 AK056382 NM_030645	267854	-	TSC_hg19_v1_chr1_+_249132449 BC029310	280203	+	TSC_hg19_v1_chr1_+_249132534 AK025954 NM_024836 AK298016	280291	+	NM_001004734|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137188|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##BC137189|OR14I1|401994|olfactory receptor, family 14, subfamily I, member 1##NM_001001824|OR2T27|403239|olfactory receptor, family 2, subfamily T, member 27##NM_001001827|OR2T35|403244|olfactory receptor, family 2, subfamily T, member 35##AY358453|SH3BP5L|80851|SH3-binding domain protein 5-like##AK056382|SH3BP5L|80851|SH3-binding domain protein 5-like##NM_030645|SH3BP5L|80851|SH3-binding domain protein 5-like##BC029310|ZNF672|79894|zinc finger protein 672##AK025954|ZNF672|79894|zinc finger protein 672##NM_024836|ZNF672|79894|zinc finger protein 672##AK298016|ZNF672|79894|zinc finger protein 672	0.0	
chr14	23521601	23521696	reg1033786.p1	3.482	+	AK122797 NM_001099780 AB299437 AB590974	-10244	+	NM_001144932 NM_002797 NM_001130725	-17258	-	BT006777 S74378 D29011 BC004146 BX248299 AB528985 CU691272 TSC_hg19_v1_chr14_-_23504095 AK300714 BX538001 BC107720 BC057840 AK311895 AK225888	-17626	-	AK057922 BC110867 TSC_hg19_v1_chr14_-_23526749 AK307746 BX248750 BC142724 AK289576 NM_022478 NM_144985	5128	-	AF124727 BX247975 TSC_hg19_v1_chr14_-_23540768 AF124728	19102	-	TSC_hg19_v1_chr14_-_23540779 NM_001164816 NM_001164817	19135	-	AK122797|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##NM_001099780|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##AB299437|PSMB11|122706|proteasome (prosome, macropain) subunit, beta type, 11##NM_001144932|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_002797|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##NM_001130725|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BT006777|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##S74378|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BX248299|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK300714|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BX538001|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BC107720|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##BC057840|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK311895|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK225888|PSMB5|5693|proteasome (prosome, macropain) subunit, beta type, 5##AK057922|CDH24|64403|cadherin 24, type 2##BC110867|CDH24|64403|cadherin 24, type 2##AK307746|CDH24|64403|cadherin 24, type 2##BX248750|CDH24|64403|cadherin 24, type 2##BC142724|CDH24|64403|cadherin 24, type 2##AK289576|CDH24|64403|cadherin 24, type 2##NM_022478|CDH24|64403|cadherin 24, type 2##NM_144985|CDH24|64403|cadherin 24, type 2##AF124727|ACIN1|22985|apoptotic chromatin condensation inducer 1##BX247975|ACIN1|22985|apoptotic chromatin condensation inducer 1##AF124728|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164816|ACIN1|22985|apoptotic chromatin condensation inducer 1##NM_001164817|ACIN1|22985|apoptotic chromatin condensation inducer 1	0.478349	CTCF.p2:11:0.478
chr16	14286565	14286658	reg1041540.p1	3.482	+	TSC_hg19_v1_chr16_+_14280544 AK093577 AX748211	-6093	+	TSC_hg19_v1_chr16_+_14165175 AK126948 AK294765 AY374297 NM_014048	-121525	+	TSC_hg19_v1_chr16_+_14014030 BC142631 NM_005236 AK289726 BC113107 U64315 BC020741 AK308341	-272580	+	BC047761 TSC_hg19_v1_chr16_+_14294209	7587	+	CU690630 AJ005698 BC044763 BC050029 TSC_hg19_v1_chr16_-_14724066 AK303348	437417	-	AK299653 TSC_hg19_v1_chr16_-_14724118 AK301648 AK293189 AK315020 NM_001134477 NM_001242992 NM_002582	437522	-	AK093577|MKL2|57496|MKL/myocardin-like 2##AK126948|MKL2|57496|MKL/myocardin-like 2##AK294765|MKL2|57496|MKL/myocardin-like 2##AY374297|MKL2|57496|MKL/myocardin-like 2##NM_014048|MKL2|57496|MKL/myocardin-like 2##BC142631|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##NM_005236|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK289726|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##U64315|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC020741|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##AK308341|ERCC4|2072|excision repair cross-complementing rodent repair deficiency, complementation group 4##BC047761|MKL2|57496|MKL/myocardin-like 2##AJ005698|PARN|5073|poly(A)-specific ribonuclease##BC044763|PARN|5073|poly(A)-specific ribonuclease##BC050029|PARN|5073|poly(A)-specific ribonuclease##AK303348|PARN|5073|poly(A)-specific ribonuclease##AK299653|PARN|5073|poly(A)-specific ribonuclease##AK301648|PARN|5073|poly(A)-specific ribonuclease##AK293189|PARN|5073|poly(A)-specific ribonuclease##AK315020|PARN|5073|poly(A)-specific ribonuclease##NM_001134477|PARN|5073|poly(A)-specific ribonuclease##NM_001242992|PARN|5073|poly(A)-specific ribonuclease##NM_002582|PARN|5073|poly(A)-specific ribonuclease	0.0	
chr21	38593116	38593191	reg1017699.p2	3.482	+	BC029827 TSC_hg19_v1_chr21_+_38593064	-94	+	D83077 NM_003316	-137907	+	TSC_hg19_v1_chr21_+_38445570 AK297921 BC092466 NM_001001894 AK291992 AK299991	-147536	+	TSC_hg19_v1_chr21_-_38639617 AK316460 AK299662	46455	-	TSC_hg19_v1_chr21_-_38639642 AJ001867 AK300024 AK312707 D87343 NM_006052 AK303624	46675	-	TSC_hg19_v1_chr21_-_38640233 BX648191 BC110655	47082	-	BC029827|DSCR9|257203|Down syndrome critical region gene 9 (non-protein coding)##D83077|TTC3|7267|tetratricopeptide repeat domain 3##NM_003316|TTC3|7267|tetratricopeptide repeat domain 3##AK297921|TTC3|7267|tetratricopeptide repeat domain 3##BC092466|TTC3|7267|tetratricopeptide repeat domain 3##NM_001001894|TTC3|7267|tetratricopeptide repeat domain 3##AK291992|TTC3|7267|tetratricopeptide repeat domain 3##AK299991|TTC3|7267|tetratricopeptide repeat domain 3##AK316460|DSCR3|10311|Down syndrome critical region gene 3##AK299662|DSCR3|10311|Down syndrome critical region gene 3##AJ001867|DSCR3|10311|Down syndrome critical region gene 3##AK300024|DSCR3|10311|Down syndrome critical region gene 3##AK312707|DSCR3|10311|Down syndrome critical region gene 3##D87343|DSCR3|10311|Down syndrome critical region gene 3##NM_006052|DSCR3|10311|Down syndrome critical region gene 3##AK303624|DSCR3|10311|Down syndrome critical region gene 3##BX648191|DSCR3|10311|Down syndrome critical region gene 3##BC110655|DSCR3|10311|Down syndrome critical region gene 3	0.0	
chr2	27294275	27294394	reg1035909.p2	3.482	+	TSC_hg19_v1_chr2_+_27274535 AK023398 BC018584 AL833844 BC007415 AK302091	-19795	+	NM_001035507 NM_021831 TSC_hg19_v1_chr2_+_27274513	-19830	+	TSC_hg19_v1_chr2_+_27255839 AK296575 AK074981 AK097308 CU686645 AL833725 BC002467	-38450	+	TSC_hg19_v1_chr2_-_27294519 AL049447 BC105283 NM_001134693	199	-	NM_007046 BC142638 AK075517 AK307539 BC090957 BC142688 TSC_hg19_v1_chr2_+_27301565	7167	+	TSC_hg19_v1_chr2_+_27301693 BC007530 BC017284 BC136279 AF088916 AL050138	7517	+	AK023398|AGBL5|60509|ATP/GTP binding protein-like 5##BC018584|AGBL5|60509|ATP/GTP binding protein-like 5##AL833844|AGBL5|60509|ATP/GTP binding protein-like 5##BC007415|AGBL5|60509|ATP/GTP binding protein-like 5##AK302091|AGBL5|60509|ATP/GTP binding protein-like 5##NM_001035507|AGBL5|60509|ATP/GTP binding protein-like 5##NM_021831|AGBL5|60509|ATP/GTP binding protein-like 5##AK296575|TMEM214|54867|transmembrane protein 214##AK074981|TMEM214|54867|transmembrane protein 214##AK097308|TMEM214|54867|transmembrane protein 214##AL833725|TMEM214|54867|transmembrane protein 214##BC002467|TMEM214|54867|transmembrane protein 214##AL049447|OST4|100128731|oligosaccharyltransferase 4 homolog (S. cerevisiae)##BC105283|OST4|100128731|oligosaccharyltransferase 4 homolog (S. cerevisiae)##NM_001134693|OST4|100128731|oligosaccharyltransferase 4 homolog (S. cerevisiae)##NM_007046|EMILIN1|11117|elastin microfibril interfacer 1##BC142638|EMILIN1|11117|elastin microfibril interfacer 1##AK075517|EMILIN1|11117|elastin microfibril interfacer 1##AK307539|EMILIN1|11117|elastin microfibril interfacer 1##BC090957|EMILIN1|11117|elastin microfibril interfacer 1##BC142688|EMILIN1|11117|elastin microfibril interfacer 1##BC007530|EMILIN1|11117|elastin microfibril interfacer 1##BC017284|EMILIN1|11117|elastin microfibril interfacer 1##BC136279|EMILIN1|11117|elastin microfibril interfacer 1##AF088916|EMILIN1|11117|elastin microfibril interfacer 1##AL050138|EMILIN1|11117|elastin microfibril interfacer 1	0.0	
chr5	157825780	157825880	reg1035353.p1	3.482	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-539740	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-641450	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-655090	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	700627	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	700912	-	AK304228 NM_001199382	808818	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.0	
chr6	158245268	158245396	reg1027150.p2	3.482	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	-958	+	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	-1043	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-442793	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	157555	+	TSC_hg19_v1_chr6_+_158402923 AF318616	157587	+	TSC_hg19_v1_chr6_+_158402928 AY152396 AB384465	157677	+	AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2##AF318616|SYNJ2|8871|synaptojanin 2##AY152396|SYNJ2|8871|synaptojanin 2	0.0	
chr6	97516375	97516470	reg1017380.p2	3.482	+	NM_052904 AK055292 BC071627 TSC_hg19_v1_chr6_+_97372638 AK295479 AF351610 AK297240	-143799	+	TSC_hg19_v1_chr6_-_97345768 NM_014165	-170658	-	TSC_hg19_v1_chr6_-_97345751 BC018802 AF161474	-170670	-	AK128060 NM_198468 BC142948 TSC_hg19_v1_chr6_-_97731095 CR749822	214668	-	AK095588 NM_005604 TSC_hg19_v1_chr6_+_99282579	1766158	+	Z11933 TSC_hg19_v1_chr6_+_99282600 BC051699 AB385538	1766250	+	NM_052904|KLHL32|114792|kelch-like 32 (Drosophila)##AK055292|KLHL32|114792|kelch-like 32 (Drosophila)##BC071627|KLHL32|114792|kelch-like 32 (Drosophila)##AK295479|KLHL32|114792|kelch-like 32 (Drosophila)##AF351610|KLHL32|114792|kelch-like 32 (Drosophila)##AK297240|KLHL32|114792|kelch-like 32 (Drosophila)##NM_014165|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##BC018802|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AF161474|NDUFAF4|29078|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4##AK128060|MMS22L|253714|MMS22-like, DNA repair protein##NM_198468|MMS22L|253714|MMS22-like, DNA repair protein##BC142948|MMS22L|253714|MMS22-like, DNA repair protein##CR749822|MMS22L|253714|MMS22-like, DNA repair protein##AK095588|POU3F2|5454|POU class 3 homeobox 2##NM_005604|POU3F2|5454|POU class 3 homeobox 2##Z11933|POU3F2|5454|POU class 3 homeobox 2##BC051699|POU3F2|5454|POU class 3 homeobox 2	0.0	
chr7	101881582	101881681	reg1036250.p1	3.482	+	M74099 NM_181552	-420750	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-422422	+	BC002778 NM_138403	-609056	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	46766	+	TSC_hg19_v1_chr7_+_101928431 AB000520	46812	+	NM_001146210	115257	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.010441	
chr7	56438328	56438418	reg1043411.p1	3.482	+	Y10275 TSC_hg19_v1_chr7_-_56184079 BC043523 NM_001145712	-254330	-	TSC_hg19_v1_chr7_-_56174186 NM_016139	-264172	-	TSC_hg19_v1_chr7_-_56174151 AF078845	-264214	-	AF277624 NM_033273	769197	-	AK131575 NM_001159279	1071509	+	NM_001159522	7067447	+	BC043523|LOC389493|389493|uncharacterized protein LOC389493##NM_001145712|LOC389493|389493|uncharacterized protein LOC389493##NM_016139|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##AF078845|CHCHD2|51142|coiled-coil-helix-coiled-coil-helix domain containing 2##AF277624|ZNF479|90827|zinc finger protein 479##NM_033273|ZNF479|90827|zinc finger protein 479##AK131575|ZNF716|441234|zinc finger protein 716##NM_001159279|ZNF716|441234|zinc finger protein 716##NM_001159522|ZNF727|442319|zinc finger protein 727	0.0	
chr9	15357109	15357203	reg1038946.p1	3.482	+	TSC_hg19_v1_chr9_-_15307325 AK298998 BC142985 AK310482 NM_001168339 NM_001168340 NM_001168341 NM_152574	-49812	-	TSC_hg19_v1_chr9_-_15307215 BC070139 AK301185 AK298581 AK091187 AX746836	-49956	-	AK301427 NM_001168342	-107001	-	TSC_hg19_v1_chr9_+_15422741 BC036031 NM_001039697	65552	+	TSC_hg19_v1_chr9_+_15422873 BC121011 BC121012 U66413 BC108743 U71300 AK293310	65712	+	TSC_hg19_v1_chr9_+_15422877 AB527501 EU446705 BC014985	65756	+	AK298998|TTC39B|158219|tetratricopeptide repeat domain 39B##BC142985|TTC39B|158219|tetratricopeptide repeat domain 39B##AK310482|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168339|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168340|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168341|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_152574|TTC39B|158219|tetratricopeptide repeat domain 39B##BC070139|TTC39B|158219|tetratricopeptide repeat domain 39B##AK301185|TTC39B|158219|tetratricopeptide repeat domain 39B##AK298581|TTC39B|158219|tetratricopeptide repeat domain 39B##AK091187|TTC39B|158219|tetratricopeptide repeat domain 39B##AK301427|TTC39B|158219|tetratricopeptide repeat domain 39B##NM_001168342|TTC39B|158219|tetratricopeptide repeat domain 39B##BC036031|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##NM_001039697|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC121011|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC121012|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##U66413|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC108743|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##U71300|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##AK293310|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##EU446705|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa##BC014985|SNAPC3|6619|small nuclear RNA activating complex, polypeptide 3, 50kDa	0.0	
chr10	112680261	112680344	reg1030193.p1	3.481	+	TSC_hg19_v1_chr10_+_112679363 BC044752 AB020669 BX649055 AF054828	-922	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	-942	+	TSC_hg19_v1_chr10_+_112679309 NM_007373	-1007	+	TSC_hg19_v1_chr10_+_112836787 NM_000681 AF284095	156550	+	AB046780 TSC_hg19_v1_chr10_-_113933602	1253259	-	AL832464 BC030783 BX647451 AL833061 AL833093 NM_001244949 NM_020918 TSC_hg19_v1_chr10_-_113943538	1263203	-	BC044752|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AB020669|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##BX649055|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AF054828|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##NM_007373|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##NM_000681|ADRA2A|150|adrenergic, alpha-2A-, receptor##AF284095|ADRA2A|150|adrenergic, alpha-2A-, receptor##AB046780|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL832464|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BC030783|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##BX647451|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833061|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##AL833093|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_001244949|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial##NM_020918|GPAM|57678|glycerol-3-phosphate acyltransferase, mitochondrial	0.0	
chr10	73999460	73999620	reg1038664.p1	3.481	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-23429	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-23752	+	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	-23776	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	34284	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	115138	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	115386	-	AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	0.0	
chr1	234100437	234100586	reg1039194.p2	3.481	+	TSC_hg19_v1_chr1_+_234040547 AK095031 NM_173508	-59899	+	CU676150 DQ892383 DQ895595 TSC_hg19_v1_chr1_+_233749922	-350592	+	NM_002245 U33632 U90065 AK314016 BC018051 U76996 TSC_hg19_v1_chr1_+_233749898	-350688	+	TSC_hg19_v1_chr1_+_234350005 BC037878	249495	+	NM_001206641 TSC_hg19_v1_chr1_+_234509261 BC052810 BC035925 BC116455 NM_001012985 BC064905 BC025793	408861	+	NM_005646 U38847 TSC_hg19_v1_chr1_-_234614871	514349	-	AK095031|SLC35F3|148641|solute carrier family 35, member F3##NM_173508|SLC35F3|148641|solute carrier family 35, member F3##DQ892383|KCNK1|3775|potassium channel, subfamily K, member 1##DQ895595|KCNK1|3775|potassium channel, subfamily K, member 1##NM_002245|KCNK1|3775|potassium channel, subfamily K, member 1##U33632|KCNK1|3775|potassium channel, subfamily K, member 1##U90065|KCNK1|3775|potassium channel, subfamily K, member 1##AK314016|KCNK1|3775|potassium channel, subfamily K, member 1##BC018051|KCNK1|3775|potassium channel, subfamily K, member 1##U76996|KCNK1|3775|potassium channel, subfamily K, member 1##BC037878|SLC35F3|148641|solute carrier family 35, member F3##NM_001206641|C1orf31|388753|chromosome 1 open reading frame 31##BC052810|C1orf31|388753|chromosome 1 open reading frame 31##BC035925|C1orf31|388753|chromosome 1 open reading frame 31##BC116455|C1orf31|388753|chromosome 1 open reading frame 31##NM_001012985|C1orf31|388753|chromosome 1 open reading frame 31##BC064905|C1orf31|388753|chromosome 1 open reading frame 31##BC025793|C1orf31|388753|chromosome 1 open reading frame 31##NM_005646|TARBP1|6894|TAR (HIV-1) RNA binding protein 1##U38847|TARBP1|6894|TAR (HIV-1) RNA binding protein 1	0.0	
chr12	4925291	4925434	reg1035716.p2	3.481	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	-6947	+	AJ271385 NM_017417 BC140888 BC140889	-95594	+	TSC_hg19_v1_chr12_+_4758272 NM_005002 BC015837 AF050641 AK308588 BC009311 AK291067 BC111546 L04490	-167084	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	93698	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	227757	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	615914	+	NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_005002|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC015837|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AF050641|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK308588|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC009311|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK291067|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC111546|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##L04490|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3	0.0	
chr1	45476892	45477038	reg1034191.p1	3.481	+	AK314668 TSC_hg19_v1_chr1_-_45452268 AK024006 NM_001166588 NM_020365	-24652	-	TSC_hg19_v1_chr1_-_45452256 BC021017 BC018728 AK022399 AF257077 BC014234 AL834288	-24728	-	AF087651 AF091501 AY358555 AB527344 AY359016 AF119569 NM_001166292 NM_003738 BC143712	-168328	-	TSC_hg19_v1_chr1_-_45476978 AK096462	25	-	AK301124 TSC_hg19_v1_chr1_-_45477019 NM_024602	59	-	TSC_hg19_v1_chr1_+_45477815 NM_000374	846	+	AK314668|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AK024006|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##NM_001166588|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##NM_020365|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##BC021017|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##BC018728|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AK022399|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AF257077|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##BC014234|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AL834288|EIF2B3|8891|eukaryotic translation initiation factor 2B, subunit 3 gamma, 58kDa##AF087651|PTCH2|8643|patched 2##AF091501|PTCH2|8643|patched 2##AY358555|PTCH2|8643|patched 2##AY359016|PTCH2|8643|patched 2##AF119569|PTCH2|8643|patched 2##NM_001166292|PTCH2|8643|patched 2##NM_003738|PTCH2|8643|patched 2##BC143712|PTCH2|8643|patched 2##AK096462|HECTD3|79654|HECT domain containing 3##AK301124|HECTD3|79654|HECT domain containing 3##NM_024602|HECTD3|79654|HECT domain containing 3##NM_000374|UROD|7389|uroporphyrinogen decarboxylase	0.0	
chr14	69255144	69255325	reg1001932.p1	3.481	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-968714	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-971935	-	AK315462 NM_152443	-1086632	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	4486	-	NM_001244698 NM_004926	5396	-	NM_001244701 AB528867	7750	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr16	27410143	27410300	reg1031573.p1	3.481	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-68877	+	TSC_hg19_v1_chr16_+_27325301 BC110343 AK223591 X52425	-84903	+	TSC_hg19_v1_chr16_+_27325254 AK314863 NM_000418 NM_001008699 AK303255	-84967	+	AK292663 NM_181078 NM_181079 AK312825	3266	+	NM_021798 AY358826 AF254067	28383	+	TSC_hg19_v1_chr16_-_27561218 BX648143	150997	-	BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BC110343|IL4R|3566|interleukin 4 receptor##AK223591|IL4R|3566|interleukin 4 receptor##X52425|IL4R|3566|interleukin 4 receptor##AK314863|IL4R|3566|interleukin 4 receptor##NM_000418|IL4R|3566|interleukin 4 receptor##NM_001008699|IL4R|3566|interleukin 4 receptor##AK303255|IL4R|3566|interleukin 4 receptor##AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.0	
chr16	54227812	54227962	reg1021424.p2	3.481	+	TSC_hg19_v1_chr16_+_53738067 AK096554 AB051539 AK295196	-489819	+	NM_001080432	-490013	+	TSC_hg19_v1_chr16_-_53737760 BC136433 AK096333 AK308390 BC017977 CR749645 AK307929 EF565106 NM_001127897 NM_015272 AK304790	-490130	-	BC034328 TSC_hg19_v1_chr16_-_54319025	91077	-	TSC_hg19_v1_chr16_+_54319531 AK309303	91634	+	DQ892008 EU176666 TSC_hg19_v1_chr16_-_54320043	92119	-	AK096554|FTO|79068|fat mass and obesity associated##AB051539|FTO|79068|fat mass and obesity associated##AK295196|FTO|79068|fat mass and obesity associated##NM_001080432|FTO|79068|fat mass and obesity associated##BC136433|RPGRIP1L|23322|RPGRIP1-like##AK096333|RPGRIP1L|23322|RPGRIP1-like##AK308390|RPGRIP1L|23322|RPGRIP1-like##BC017977|RPGRIP1L|23322|RPGRIP1-like##CR749645|RPGRIP1L|23322|RPGRIP1-like##AK307929|RPGRIP1L|23322|RPGRIP1-like##EF565106|RPGRIP1L|23322|RPGRIP1-like##NM_001127897|RPGRIP1L|23322|RPGRIP1-like##NM_015272|RPGRIP1L|23322|RPGRIP1-like##AK304790|RPGRIP1L|23322|RPGRIP1-like##BC034328|IRX3|79191|iroquois homeobox 3##DQ892008|IRX3|79191|iroquois homeobox 3##EU176666|IRX3|79191|iroquois homeobox 3	0.0	
chr18	31739140	31739278	reg1030889.p2	3.481	+	AK296539 NM_001198549	-110643	-	AB051500 TSC_hg19_v1_chr18_+_31319257	-420003	+	NM_030632 AK131454	-580650	+	NM_001198547	63224	-	AK297185 BC000313 TSC_hg19_v1_chr18_-_31803319	64034	-	AB017800 NM_001198546 NM_001198548 NM_003787	64305	-	AK296539|NOL4|8715|nucleolar protein 4##NM_001198549|NOL4|8715|nucleolar protein 4##AB051500|ASXL3|80816|additional sex combs like 3 (Drosophila)##NM_030632|ASXL3|80816|additional sex combs like 3 (Drosophila)##AK131454|ASXL3|80816|additional sex combs like 3 (Drosophila)##NM_001198547|NOL4|8715|nucleolar protein 4##AK297185|NOL4|8715|nucleolar protein 4##BC000313|NOL4|8715|nucleolar protein 4##AB017800|NOL4|8715|nucleolar protein 4##NM_001198546|NOL4|8715|nucleolar protein 4##NM_001198548|NOL4|8715|nucleolar protein 4##NM_003787|NOL4|8715|nucleolar protein 4	0.013537	
chr18	56724328	56724478	reg1000100.p1	3.481	+	TSC_hg19_v1_chr18_+_56531281 BC036366	-193054	+	TSC_hg19_v1_chr18_+_56530714 AB046849	-193548	+	NM_018181 AF295077 BC130618 BC130620	-194284	+	TSC_hg19_v1_chr18_+_56807119 AK314107 AF212233 AK311213 NM_033280 AK295346 AK307127 BC009703 CU679449	82744	+	TSC_hg19_v1_chr18_+_56887389 AK307264 BC004488 NM_001012512 NM_001012513 NM_002091 K02054 DQ893451 DQ896223 AB528662 AB102889 BT006803	163040	+	BC051901 AF115392 NM_013435 AB593018	216251	-	BC036366|ZNF532|55205|zinc finger protein 532##AB046849|ZNF532|55205|zinc finger protein 532##NM_018181|ZNF532|55205|zinc finger protein 532##AF295077|ZNF532|55205|zinc finger protein 532##BC130618|ZNF532|55205|zinc finger protein 532##BC130620|ZNF532|55205|zinc finger protein 532##AK314107|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AF212233|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##NM_033280|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK295346|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307127|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##BC009703|SEC11C|90701|SEC11 homolog C (S. cerevisiae)##AK307264|GRP|2922|gastrin-releasing peptide##BC004488|GRP|2922|gastrin-releasing peptide##NM_001012512|GRP|2922|gastrin-releasing peptide##NM_001012513|GRP|2922|gastrin-releasing peptide##NM_002091|GRP|2922|gastrin-releasing peptide##K02054|GRP|2922|gastrin-releasing peptide##DQ893451|GRP|2922|gastrin-releasing peptide##DQ896223|GRP|2922|gastrin-releasing peptide##AB102889|GRP|2922|gastrin-releasing peptide##BT006803|GRP|2922|gastrin-releasing peptide##BC051901|RAX|30062|retina and anterior neural fold homeobox##AF115392|RAX|30062|retina and anterior neural fold homeobox##NM_013435|RAX|30062|retina and anterior neural fold homeobox##AB593018|RAX|30062|retina and anterior neural fold homeobox	0.240159	CTCF.p2:9:0.240
chr19	29776918	29776985	reg1045066.p2	3.481	+	TSC_hg19_v1_chr19_-_29704107 NM_006003	-72830	-	TSC_hg19_v1_chr19_-_29704059 DQ891841 BC000649 BC067832 BC010035 BC021057 AK291134	-72891	-	TSC_hg19_v1_chr19_+_28284946 AK095009	-1492023	+	NM_001146339	240539	+	NM_006627 AK314790 TSC_hg19_v1_chr19_+_30097189 AF001176 BC013686 CR936714 Y18863 BC006098 AK303791 BC004438	320238	+	NM_024310 TSC_hg19_v1_chr19_+_30156362 AK301616 AK027758 BC002744 BC018876	379398	+	NM_006003|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##DQ891841|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC000649|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC067832|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##BC010035|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##AK291134|UQCRFS1|7386|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1##NM_001146339|VSTM2B|342865|V-set and transmembrane domain containing 2B##NM_006627|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK314790|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AF001176|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC013686|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##CR936714|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##Y18863|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC006098|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##AK303791|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##BC004438|POP4|10775|processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)##NM_024310|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK301616|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##AK027758|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC002744|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1##BC018876|PLEKHF1|79156|pleckstrin homology domain containing, family F (with FYVE domain) member 1	0.0	
chr19	42683525	42683615	reg1039774.p2	3.481	+	M36718 X13809 BT007438 AB590941 TSC_hg19_v1_chr19_-_42636564 BC006101 M36653 NM_001207025 NM_001207026 NM_001247994 NM_002698 X53468	-46979	-	TSC_hg19_v1_chr19_+_42580336 AF447880 AK027895 BC001184	-103204	+	TSC_hg19_v1_chr19_+_42580286 NM_022752	-103288	+	TSC_hg19_v1_chr19_-_42721830 BC027930 NM_133328 AY125488 BC013372 AK307895 AK130203 AK075328	38269	-	TSC_hg19_v1_chr19_+_42724463 AK298895 AB075831 NM_133444	40894	+	AK122649 TSC_hg19_v1_chr19_+_42724498 BC013013	40931	+	M36718|POU2F2|5452|POU class 2 homeobox 2##X13809|POU2F2|5452|POU class 2 homeobox 2##BT007438|POU2F2|5452|POU class 2 homeobox 2##BC006101|POU2F2|5452|POU class 2 homeobox 2##M36653|POU2F2|5452|POU class 2 homeobox 2##NM_001207025|POU2F2|5452|POU class 2 homeobox 2##NM_001207026|POU2F2|5452|POU class 2 homeobox 2##NM_001247994|POU2F2|5452|POU class 2 homeobox 2##NM_002698|POU2F2|5452|POU class 2 homeobox 2##X53468|POU2F2|5452|POU class 2 homeobox 2##AF447880|ZNF574|64763|zinc finger protein 574##AK027895|ZNF574|64763|zinc finger protein 574##BC001184|ZNF574|64763|zinc finger protein 574##NM_022752|ZNF574|64763|zinc finger protein 574##BC027930|DEDD2|162989|death effector domain containing 2##NM_133328|DEDD2|162989|death effector domain containing 2##AY125488|DEDD2|162989|death effector domain containing 2##BC013372|DEDD2|162989|death effector domain containing 2##AK307895|DEDD2|162989|death effector domain containing 2##AK130203|DEDD2|162989|death effector domain containing 2##AK075328|DEDD2|162989|death effector domain containing 2##AK298895|ZNF526|116115|zinc finger protein 526##AB075831|ZNF526|116115|zinc finger protein 526##NM_133444|ZNF526|116115|zinc finger protein 526##AK122649|ZNF526|116115|zinc finger protein 526##BC013013|ZNF526|116115|zinc finger protein 526	0.999103	CTCF.p2:12:0.978
chr2	111878116	111878232	reg1038806.p1	3.481	+	AK300513 NM_001142807 BC022268	-387995	+	TSC_hg19_v1_chr2_+_111435820 BC040607	-442352	+	AF043294 BC017038 BC028201 TSC_hg19_v1_chr2_-_111435641 AF047471 AF046078 AF053305 AK291221 AK023540 AK225317 AK302418 NM_004336	-442531	-	TSC_hg19_v1_chr2_+_111878490 AK290377 AK291269 NM_001204106 NM_001204107 NM_001204108 NM_001204109 NM_001204110 NM_001204111 NM_001204112 NM_001204113 NM_006538 NM_138621 NM_138622 NM_138623 NM_138624 NM_138625 NM_138626 NM_138627 NM_207002 NM_207003 BC033694	313	+	BC104902 BC104904 TSC_hg19_v1_chr2_-_112641704	763452	-	TSC_hg19_v1_chr2_-_112641759 AJ278357 NM_022662	763587	-	AK300513|ACOXL|55289|acyl-CoA oxidase-like##NM_001142807|ACOXL|55289|acyl-CoA oxidase-like##BC022268|ACOXL|55289|acyl-CoA oxidase-like##AF043294|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC017038|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##BC028201|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF047471|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF046078|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AF053305|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK291221|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK023540|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK225317|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK302418|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##NM_004336|BUB1|699|budding uninhibited by benzimidazoles 1 homolog (yeast)##AK290377|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##AK291269|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204106|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204107|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204108|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204109|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204110|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204111|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204112|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_001204113|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_006538|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138621|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138622|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138623|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138624|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138625|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138626|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_138627|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207002|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##NM_207003|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC033694|BCL2L11|10018|BCL2-like 11 (apoptosis facilitator)##BC104902|ANAPC1|64682|anaphase promoting complex subunit 1##BC104904|ANAPC1|64682|anaphase promoting complex subunit 1##AJ278357|ANAPC1|64682|anaphase promoting complex subunit 1##NM_022662|ANAPC1|64682|anaphase promoting complex subunit 1	0.0	
chr22	43123631	43123697	reg1040598.p2	3.481	+	TSC_hg19_v1_chr22_-_43117270 AK312927	-6387	-	TSC_hg19_v1_chr22_-_43116877 BC017068 GU902275 GU902276 GU902277 GU902278 GU902279 GU902280 GU902281 AK130208 NM_017436	-6809	-	AK074388 TSC_hg19_v1_chr22_-_43089917 AJ245581 CU677819 AB590407 DQ891619 DQ894811	-33757	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	129547	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	129606	-	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	129691	-	AK312927|A4GALT|53947|alpha 1,4-galactosyltransferase##BC017068|A4GALT|53947|alpha 1,4-galactosyltransferase##NM_017436|A4GALT|53947|alpha 1,4-galactosyltransferase##AK074388|A4GALT|53947|alpha 1,4-galactosyltransferase##AJ245581|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ891619|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ894811|A4GALT|53947|alpha 1,4-galactosyltransferase##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3	0.0	
chr8	142139893	142139971	reg1033659.p1	3.481	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-1195	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-128676	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-494308	-	AK128212 NM_001080431	98740	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	124258	-	NM_005293	237432	-	NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.115098	
chr12	124993864	124993937	reg1025129.p2	3.480	+	AK126577 NM_181709	-220191	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-536171	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-536701	-	TSC_hg19_v1_chr12_-_125002875 BC033087	8959	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	58175	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	354405	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr1	240354241	240354356	reg1043756.p2	3.480	+	TSC_hg19_v1_chr1_+_240255182 NM_020066	-99121	+	AF279779 NM_000740	-561926	+	TSC_hg19_v1_chr1_+_239550016 AK056349	-804356	+	BC046632 TSC_hg19_v1_chr1_-_240775431	421111	-	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	421156	-	AF090116 AK314862 TSC_hg19_v1_chr1_-_241520451	1166120	-	NM_020066|FMN2|56776|formin 2##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##BC046632|GREM2|64388|gremlin 2##AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2##AF090116|RGS7|6000|regulator of G-protein signaling 7##AK314862|RGS7|6000|regulator of G-protein signaling 7	0.888628	CTCF.p2:-28:0.889
chr12	75683738	75683830	reg1036154.p2	3.480	+	AK094720 NM_139136 NM_139137 NM_153748	-80274	-	AK309245 AB209994 AK294269 TSC_hg19_v1_chr12_-_75603243	-80556	-	AK054742 TSC_hg19_v1_chr12_+_74933681	-750164	+	BC033860 AK091839 AX747212 NM_032606	40035	-	AY358731 BC014603 NM_152779 DQ894020 EU176187 CU677065	44678	+	BC016749 AK093175 AX747973 TSC_hg19_v1_chr12_+_75784869	101075	+	AK094720|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##NM_139136|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##NM_139137|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##NM_153748|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AK309245|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AB209994|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##AK294269|KCNC2|3747|potassium voltage-gated channel, Shaw-related subfamily, member 2##BC033860|CAPS2|84698|calcyphosine 2##AK091839|CAPS2|84698|calcyphosine 2##NM_032606|CAPS2|84698|calcyphosine 2##AY358731|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##BC014603|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##NM_152779|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##DQ894020|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##EU176187|GLIPR1L1|256710|GLI pathogenesis-related 1 like 1##BC016749|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2##AK093175|GLIPR1L2|144321|GLI pathogenesis-related 1 like 2	0.0	
chr14	102204520	102204608	reg1035095.p2	3.480	+	BX161470 NM_001362 S79854 TSC_hg19_v1_chr14_+_102027831 AK292310 BC017717	-176801	+	BC150617 NM_001134888	-853381	-	AK092707 TSC_hg19_v1_chr14_+_101300861	-903729	+	NM_001161725 NM_001161726 TSC_hg19_v1_chr14_+_102228166 AL834350 BC051442 AK131391 AK302470	23622	+	TSC_hg19_v1_chr14_+_102276171 NM_002719 NM_178586 NM_178587 AK295449 AK315072 Z69030 U37352 BC016183	71619	+	AB451341 CU677587 D26445 AB463199 L42375 TSC_hg19_v1_chr14_+_102276338	71745	+	BX161470|DIO3|1735|deiodinase, iodothyronine, type III##NM_001362|DIO3|1735|deiodinase, iodothyronine, type III##S79854|DIO3|1735|deiodinase, iodothyronine, type III##BC017717|DIO3|1735|deiodinase, iodothyronine, type III##BC150617|RTL1|388015|retrotransposon-like 1##NM_001134888|RTL1|388015|retrotransposon-like 1##AK092707|MEG3|55384|maternally expressed 3 (non-protein coding)##NM_001161725|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_001161726|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AL834350|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC051442|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK131391|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK302470|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_002719|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178586|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##NM_178587|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AK315072|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##Z69030|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##U37352|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##BC016183|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##AB451341|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##D26445|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma##L42375|PPP2R5C|5527|protein phosphatase 2, regulatory subunit B', gamma	0.044104	
chr14	68742374	68742554	reg1037611.p2	3.480	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-455944	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-459165	-	AK315462 NM_152443	-573862	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	517256	-	NM_001244698 NM_004926	518166	-	NM_001244701 AB528867	520520	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr14	91863856	91864011	reg1038106.p1	3.480	+	BC098567 NM_003485	-143739	-	BC128536 NM_001177676	-153082	-	TSC_hg19_v1_chr14_+_91581017 NM_001102367 BX248060 BC010614 AY358516	-282906	+	TSC_hg19_v1_chr14_-_91884159 AF070587	20215	-	TSC_hg19_v1_chr14_-_91884165 NM_001080414	20242	-	BC072409 AB095930 TSC_hg19_v1_chr14_-_91976621	112567	-	BC098567|GPR68|8111|G protein-coupled receptor 68##NM_003485|GPR68|8111|G protein-coupled receptor 68##BC128536|GPR68|8111|G protein-coupled receptor 68##NM_001177676|GPR68|8111|G protein-coupled receptor 68##NM_001102367|C14orf159|80017|chromosome 14 open reading frame 159##BX248060|C14orf159|80017|chromosome 14 open reading frame 159##BC010614|C14orf159|80017|chromosome 14 open reading frame 159##AY358516|C14orf159|80017|chromosome 14 open reading frame 159##AF070587|CCDC88C|440193|coiled-coil domain containing 88C##NM_001080414|CCDC88C|440193|coiled-coil domain containing 88C##BC072409|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)##AB095930|SMEK1|55671|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	0.0	
chr15	74782155	74782228	reg1007909.p1	3.480	+	TSC_hg19_v1_chr15_+_74753647 BC014373 AF085896	-28540	+	TSC_hg19_v1_chr15_-_74753521 BC030055 NM_032907 NM_201265	-28679	-	AY037166 BC033919 BC007913 TSC_hg19_v1_chr15_-_74753464	-28744	-	AK302034 TSC_hg19_v1_chr15_+_74833575 BC045545 NM_006465 AF116846 AK298716 BC041792 AB208830 BC060824	51369	+	L29217 L29220 NM_003992	118521	+	AK091692 AX747131 NM_001130028	125143	+	BC014373|LOC440288|440288|uncharacterized LOC440288##AF085896|LOC440288|440288|uncharacterized LOC440288##BC030055|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##NM_032907|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##NM_201265|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##AY037166|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC033919|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##BC007913|UBL7|84993|ubiquitin-like 7 (bone marrow stromal cell-derived)##AK302034|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##BC045545|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##NM_006465|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##AF116846|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##AK298716|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##BC041792|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##AB208830|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##BC060824|ARID3B|10620|AT rich interactive domain 3B (BRIGHT-like)##L29217|CLK3|1198|CDC-like kinase 3##L29220|CLK3|1198|CDC-like kinase 3##NM_003992|CLK3|1198|CDC-like kinase 3##AK091692|CLK3|1198|CDC-like kinase 3##NM_001130028|CLK3|1198|CDC-like kinase 3	0.0	
chr17	64196906	64197021	reg1037127.p1	3.480	+	BC131805 TSC_hg19_v1_chr17_-_64188195 BC037991 NM_145036 AK299075 AK096929 NM_001199165	-8782	-	BC029524 NM_001037325	-374303	-	CR933657 TSC_hg19_v1_chr17_-_63557767	-639195	-	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	28562	-	TSC_hg19_v1_chr17_+_64298733 BC053321	101787	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	101964	+	BC131805|CEP112|201134|centrosomal protein 112kDa##BC037991|CEP112|201134|centrosomal protein 112kDa##NM_145036|CEP112|201134|centrosomal protein 112kDa##AK299075|CEP112|201134|centrosomal protein 112kDa##AK096929|CEP112|201134|centrosomal protein 112kDa##NM_001199165|CEP112|201134|centrosomal protein 112kDa##BC029524|CEP112|201134|centrosomal protein 112kDa##NM_001037325|CEP112|201134|centrosomal protein 112kDa##CR933657|AXIN2|8313|axin 2##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC053321|PRKCA|5578|protein kinase C, alpha##NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha	0.951328	CTCF.p2:-38:0.951
chr20	42143209	42143320	reg1022867.p2	3.480	+	TSC_hg19_v1_chr20_+_42143151 AK310345 NM_015478 AK308334 BC039820 BC034398 HQ257883 EU446490	-146	+	TSC_hg19_v1_chr20_+_42136336 NM_032107 AK299199	-6920	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	-56661	+	NM_170693 TSC_hg19_v1_chr20_+_42187666 AK308502	44386	+	BC006523 TSC_hg19_v1_chr20_+_42187715 BC014037 AF169034	44456	+	NM_001199264 BC065511 AK289596	50550	+	AK310345|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##NM_015478|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK308334|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##BC039820|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##BC034398|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##EU446490|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##NM_032107|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK299199|L3MBTL1|26013|l(3)mbt-like 1 (Drosophila)##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6##NM_170693|SGK2|10110|serum/glucocorticoid regulated kinase 2##AK308502|SGK2|10110|serum/glucocorticoid regulated kinase 2##BC006523|SGK2|10110|serum/glucocorticoid regulated kinase 2##BC014037|SGK2|10110|serum/glucocorticoid regulated kinase 2##AF169034|SGK2|10110|serum/glucocorticoid regulated kinase 2##NM_001199264|SGK2|10110|serum/glucocorticoid regulated kinase 2##BC065511|SGK2|10110|serum/glucocorticoid regulated kinase 2##AK289596|SGK2|10110|serum/glucocorticoid regulated kinase 2	0.036729	
chr2	132286939	132287109	reg1032431.p1	3.480	+	BC063387 AB299086 AB299087 BC016861 NM_138770 CU677751 CU687684	-1518	+	AK304811 TSC_hg19_v1_chr2_+_132250648 AK293811 AK300337 AK303293 AK308371 BC093080	-36439	+	TSC_hg19_v1_chr2_-_132250072 NM_001085365	-36963	-	AF038169 NM_013310	193039	+	BC043584 NM_214461	272209	-	AK122643 NM_001508	887122	+	BC063387|CCDC74A|90557|coiled-coil domain containing 74A##AB299086|CCDC74A|90557|coiled-coil domain containing 74A##AB299087|CCDC74A|90557|coiled-coil domain containing 74A##BC016861|CCDC74A|90557|coiled-coil domain containing 74A##NM_138770|CCDC74A|90557|coiled-coil domain containing 74A##AK304811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK293811|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK300337|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK303293|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##AK308371|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##BC093080|LOC150776|150776|sphingomyelin phosphodiesterase 4, neutral membrane pseudogene##NM_001085365|MZT2A|653784|mitotic spindle organizing protein 2A##AF038169|C2orf27A|29798|chromosome 2 open reading frame 27A##NM_013310|C2orf27A|29798|chromosome 2 open reading frame 27A##BC043584|C2orf27B|408029|chromosome 2 open reading frame 27B##NM_214461|C2orf27B|408029|chromosome 2 open reading frame 27B##AK122643|GPR39|2863|G protein-coupled receptor 39##NM_001508|GPR39|2863|G protein-coupled receptor 39	0.0	
chr2	157203319	157203385	reg1042316.p1	3.480	+	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	-14189	-	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	-16662	-	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	-1648163	+	AK291065 U79250 TSC_hg19_v1_chr2_+_157291964 NM_001083112	88606	+	TSC_hg19_v1_chr2_+_157291981 AK290057	88653	+	TSC_hg19_v1_chr2_+_157292178 AB209399 U36310 AK299645	88882	+	S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK291065|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U79250|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##NM_001083112|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK290057|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AB209399|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##U36310|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)##AK299645|GPD2|2820|glycerol-3-phosphate dehydrogenase 2 (mitochondrial)	0.0	
chr3	107362001	107362110	reg1037407.p2	3.480	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-120206	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-265745	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-402463	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	447818	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	579237	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	653346	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.0	
chr3	123926892	123927073	reg1037148.p2	3.480	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-113377	+	AF303889 NM_017578	-216784	-	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	-246727	-	TSC_hg19_v1_chr3_+_124103674 AK131379	176641	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	376546	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	522257	+	AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14##AK131379|KALRN|8997|kalirin, RhoGEF kinase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase	0.0	
chr4	135856603	135856707	reg1040102.p1	3.480	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	-733737	-	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	-1783372	+	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	-1786199	+	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	2596937	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	2596987	-	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	3306709	-	NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11	0.9699	CTCF.p2:15:0.970
chr5	177409369	177409435	reg1022630.p2	3.480	+	AB018295 NM_173663	-201918	-	TSC_hg19_v1_chr5_-_177099217 AK297457	-310173	-	TSC_hg19_v1_chr5_+_177027143 BC007317 NM_007255 BC072403 AY358578 BC062983 AB028600 AK023506 AF142675 DQ893010 DQ896256 AB527637 AJ005382	-382248	+	AF076215 NM_006261	13840	-	TSC_hg19_v1_chr5_+_177482580 AB055766	73176	+	TSC_hg19_v1_chr5_+_177540665 BC053323 NM_015111	131226	+	AB018295|FAM153A|285596|family with sequence similarity 153, member A##NM_173663|FAM153A|285596|family with sequence similarity 153, member A##AK297457|LOC202181|202181|chromosome 5 open reading frame 25 pseudogene##BC007317|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##NM_007255|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC072403|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AY358578|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##BC062983|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AB028600|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AK023506|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF142675|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ893010|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##DQ896256|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AJ005382|B4GALT7|11285|xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7 (galactosyltransferase I)##AF076215|PROP1|5626|PROP paired-like homeobox 1##NM_006261|PROP1|5626|PROP paired-like homeobox 1##AB055766|RPL19|6143|ribosomal protein L19##BC053323|N4BP3|23138|NEDD4 binding protein 3##NM_015111|N4BP3|23138|NEDD4 binding protein 3	0.0	
chr6	135480793	135480921	reg1037931.p2	3.480	+	TSC_hg19_v1_chr6_-_135375958 AK024258 AK295545 AF161394 U87791 AJ459826 AJ459827 NM_001145158 NM_001145207 NM_006620	-104863	-	CU674720 EU831981 EU832074 TSC_hg19_v1_chr6_-_135375948 BC040849 AJ420551 BC001465	-104969	-	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	-209625	-	TSC_hg19_v1_chr6_+_135502445 AJ606317 AJ606318 AJ606319 AJ606320 AJ606321 AJ606322 AJ606323 AJ606324 NM_001130172 NM_001130173 NM_001161656 NM_001161657 NM_001161658 NM_001161659 NM_001161660 NM_005375 X52125	21591	+	TSC_hg19_v1_chr6_+_135502507 BC064955	21638	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	21729	+	AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)##AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)##AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)##U87791|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)##EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)##EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)##BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)##BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	0.0	
chr7	44826700	44826880	reg1031992.p2	3.480	+	NM_174929 BC131780 BC016968 AY426594 AF357908	-30973	+	TSC_hg19_v1_chr7_+_44788465 AK090415 NM_031449	-38299	+	TSC_hg19_v1_chr7_+_44788175 BC110435	-38608	+	TSC_hg19_v1_chr7_+_44836244 BC137057 BC137058 NM_021130	9427	+	TSC_hg19_v1_chr7_+_44836279 AK290851 BC005982 AK130101 AK293003 BC007104 BC013915 AK026569 AK297340 AK316564 BC093076 AK290085 BC005320 D28351 BC106030 BC073992 BC003026 BC000689	9497	+	Y00052 TSC_hg19_v1_chr7_+_44836309 AB464007 DQ892625 DQ895865 CU674338 AB451307 AB451438 CR456707	9526	+	NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2##NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##D28351|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	0.0	
chr9	130588584	130588659	reg1039743.p2	3.480	+	TSC_hg19_v1_chr9_+_130565577 AK056920	-23036	+	TSC_hg19_v1_chr9_+_130565522 NM_001018078 AY007210	-23132	+	TSC_hg19_v1_chr9_+_130565171 NM_004957 AK315523 AK295309 BC064393 BC009901 BT006639 BC007121 M98045	-23385	+	J05481 BT006872 AB590238 DQ893673 DQ895827 TSC_hg19_v1_chr9_-_130616670	28016	-	TSC_hg19_v1_chr9_-_130616938 BC014271 BC020391 X72012 AK290389 AK300156	28235	-	TSC_hg19_v1_chr9_-_130616968 AK222669 AK302455	28354	-	AK056920|FPGS|2356|folylpolyglutamate synthase##NM_001018078|FPGS|2356|folylpolyglutamate synthase##AY007210|FPGS|2356|folylpolyglutamate synthase##NM_004957|FPGS|2356|folylpolyglutamate synthase##AK315523|FPGS|2356|folylpolyglutamate synthase##AK295309|FPGS|2356|folylpolyglutamate synthase##BC064393|FPGS|2356|folylpolyglutamate synthase##BC009901|FPGS|2356|folylpolyglutamate synthase##BT006639|FPGS|2356|folylpolyglutamate synthase##BC007121|FPGS|2356|folylpolyglutamate synthase##M98045|FPGS|2356|folylpolyglutamate synthase##J05481|ENG|2022|endoglin##BT006872|ENG|2022|endoglin##DQ893673|ENG|2022|endoglin##DQ895827|ENG|2022|endoglin##BC014271|ENG|2022|endoglin##BC020391|ENG|2022|endoglin##X72012|ENG|2022|endoglin##AK290389|ENG|2022|endoglin##AK300156|ENG|2022|endoglin##AK222669|ENG|2022|endoglin##AK302455|ENG|2022|endoglin	0.0	
chr10	63703542	63703659	reg1036568.p2	3.479	+	TSC_hg19_v1_chr10_+_63661457 AK296921 BC107800 BC056680 AB527389	-42169	+	NM_032199	-42588	+	BC041932 NM_173554	-280882	+	TSC_hg19_v1_chr10_+_63809115 BC015120 NM_001244638 BC066345 AK024803	105496	+	TSC_hg19_v1_chr10_-_64028481 AY150309 BC025765 NM_145307 BC141821 BC142725	324939	-	NM_014951 NM_199450 NM_199451 AB020651 AJ505148 AJ505149 BC035049 BC060817 TSC_hg19_v1_chr10_+_64134088 BC017841 BC070073 AJ505147 AK289808 AK289515	430443	+	AK296921|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC107800|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC056680|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_032199|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC041932|C10orf107|219621|chromosome 10 open reading frame 107##NM_173554|C10orf107|219621|chromosome 10 open reading frame 107##BC015120|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##NM_001244638|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##BC066345|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AK024803|ARID5B|84159|AT rich interactive domain 5B (MRF1-like)##AY150309|RTKN2|219790|rhotekin 2##BC025765|RTKN2|219790|rhotekin 2##NM_145307|RTKN2|219790|rhotekin 2##BC141821|RTKN2|219790|rhotekin 2##BC142725|RTKN2|219790|rhotekin 2##NM_014951|ZNF365|22891|zinc finger protein 365##NM_199450|ZNF365|22891|zinc finger protein 365##NM_199451|ZNF365|22891|zinc finger protein 365##AB020651|ZNF365|22891|zinc finger protein 365##AJ505148|ZNF365|22891|zinc finger protein 365##AJ505149|ZNF365|22891|zinc finger protein 365##BC035049|ZNF365|22891|zinc finger protein 365##BC060817|ZNF365|22891|zinc finger protein 365##BC017841|ZNF365|22891|zinc finger protein 365##BC070073|ZNF365|22891|zinc finger protein 365##AJ505147|ZNF365|22891|zinc finger protein 365##AK289808|ZNF365|22891|zinc finger protein 365##AK289515|ZNF365|22891|zinc finger protein 365	0.150057	
chr11	111237071	111237139	reg1041696.p1	3.479	+	TSC_hg19_v1_chr11_+_111170033 AK292195 NM_001136105	-67072	+	BC039669 NM_198498	-110399	+	TSC_hg19_v1_chr11_-_110583161 AK307602 AY496263 AY496264 NM_020809	-653820	-	CU689418 DQ890869 EU176491 AB464058 X83504 BC032549 Z47550 AK313573 TSC_hg19_v1_chr11_-_111250000	12847	-	NM_006235	13051	-	BC031045 NM_017589	145965	-	AK292195|C11orf93|120376|chromosome 11 open reading frame 93##NM_001136105|C11orf93|120376|chromosome 11 open reading frame 93##BC039669|C11orf53|341032|chromosome 11 open reading frame 53##NM_198498|C11orf53|341032|chromosome 11 open reading frame 53##AK307602|ARHGAP20|57569|Rho GTPase activating protein 20##AY496263|ARHGAP20|57569|Rho GTPase activating protein 20##AY496264|ARHGAP20|57569|Rho GTPase activating protein 20##NM_020809|ARHGAP20|57569|Rho GTPase activating protein 20##DQ890869|POU2AF1|5450|POU class 2 associating factor 1##EU176491|POU2AF1|5450|POU class 2 associating factor 1##X83504|POU2AF1|5450|POU class 2 associating factor 1##BC032549|POU2AF1|5450|POU class 2 associating factor 1##Z47550|POU2AF1|5450|POU class 2 associating factor 1##AK313573|POU2AF1|5450|POU class 2 associating factor 1##NM_006235|POU2AF1|5450|POU class 2 associating factor 1##BC031045|BTG4|54766|B-cell translocation gene 4##NM_017589|BTG4|54766|B-cell translocation gene 4	0.116409	
chr1	231473827	231473919	reg1029608.p2	3.479	+	TSC_hg19_v1_chr1_+_231473794 BC015740	-86	+	NM_001010984 NM_032018 BC068478 TSC_hg19_v1_chr1_+_231473753	-155	+	CU690194 AB587600 BC035763 TSC_hg19_v1_chr1_-_231473577 NM_175876 AK096460	-319	-	AF229245 NM_022051	86916	-	FJ804217 FJ804218 FJ804219 FJ804220 FJ804221 FJ804222 FJ804223 FJ804224 NM_005999 X95073 TSC_hg19_v1_chr1_+_231664423 BC011797 BC000236 BC010376 AK313068	190558	+	TSC_hg19_v1_chr1_+_231762561 AF222980 AJ506177 AJ506178 FJ804174 FJ804175 FJ804176 FJ804177 FJ804178 FJ804179 FJ804180 FJ804181 FJ804182 FJ804183 FJ804184 FJ804185 FJ804186 FJ804187 FJ804188 FJ804189 FJ804190 FJ804191 FJ804192 FJ804193 FJ804194 FJ804195 FJ804196 FJ804197 FJ804198 FJ804199 FJ804200 FJ804201 FJ804202 FJ804203 FJ804204 FJ804205 FJ804206 FJ804207 FJ804208 FJ804209 FJ804210 FJ804211 FJ804212 FJ804213 FJ804214 FJ804215 FJ804216 NM_001012957 NM_001012958 NM_001012959 NM_001164537 NM_001164538 NM_001164539 NM_001164540 NM_001164541 NM_001164542 NM_001164544 NM_001164545 NM_001164546 NM_001164547 NM_001164548 NM_001164549 NM_001164550 NM_001164551 NM_001164552 NM_001164553 NM_001164554 NM_001164555 NM_001164556 NM_018662 AB007926 BC151225 BC142622 BC038954	288682	+	BC015740|C1orf124|83932|chromosome 1 open reading frame 124##NM_001010984|C1orf124|83932|chromosome 1 open reading frame 124##NM_032018|C1orf124|83932|chromosome 1 open reading frame 124##BC068478|C1orf124|83932|chromosome 1 open reading frame 124##BC035763|EXOC8|149371|exocyst complex component 8##NM_175876|EXOC8|149371|exocyst complex component 8##AK096460|EXOC8|149371|exocyst complex component 8##AF229245|EGLN1|54583|egl nine homolog 1 (C. elegans)##NM_022051|EGLN1|54583|egl nine homolog 1 (C. elegans)##FJ804217|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804218|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804219|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804220|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804221|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804222|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804223|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##FJ804224|TSNAX-DISC1|100303453|TSNAX-DISC1 readthrough##NM_005999|TSNAX|7257|translin-associated factor X##X95073|TSNAX|7257|translin-associated factor X##BC011797|TSNAX|7257|translin-associated factor X##BC010376|TSNAX|7257|translin-associated factor X##AK313068|TSNAX|7257|translin-associated factor X##AF222980|DISC1|27185|disrupted in schizophrenia 1##AJ506177|DISC1|27185|disrupted in schizophrenia 1##AJ506178|DISC1|27185|disrupted in schizophrenia 1##FJ804174|DISC1|27185|disrupted in schizophrenia 1##FJ804175|DISC1|27185|disrupted in schizophrenia 1##FJ804176|DISC1|27185|disrupted in schizophrenia 1##FJ804177|DISC1|27185|disrupted in schizophrenia 1##FJ804178|DISC1|27185|disrupted in schizophrenia 1##FJ804179|DISC1|27185|disrupted in schizophrenia 1##FJ804180|DISC1|27185|disrupted in schizophrenia 1##FJ804181|DISC1|27185|disrupted in schizophrenia 1##FJ804182|DISC1|27185|disrupted in schizophrenia 1##FJ804183|DISC1|27185|disrupted in schizophrenia 1##FJ804184|DISC1|27185|disrupted in schizophrenia 1##FJ804185|DISC1|27185|disrupted in schizophrenia 1##FJ804186|DISC1|27185|disrupted in schizophrenia 1##FJ804187|DISC1|27185|disrupted in schizophrenia 1##FJ804188|DISC1|27185|disrupted in schizophrenia 1##FJ804189|DISC1|27185|disrupted in schizophrenia 1##FJ804190|DISC1|27185|disrupted in schizophrenia 1##FJ804191|DISC1|27185|disrupted in schizophrenia 1##FJ804192|DISC1|27185|disrupted in schizophrenia 1##FJ804193|DISC1|27185|disrupted in schizophrenia 1##FJ804194|DISC1|27185|disrupted in schizophrenia 1##FJ804195|DISC1|27185|disrupted in schizophrenia 1##FJ804196|DISC1|27185|disrupted in schizophrenia 1##FJ804197|DISC1|27185|disrupted in schizophrenia 1##FJ804198|DISC1|27185|disrupted in schizophrenia 1##FJ804199|DISC1|27185|disrupted in schizophrenia 1##FJ804200|DISC1|27185|disrupted in schizophrenia 1##FJ804201|DISC1|27185|disrupted in schizophrenia 1##FJ804202|DISC1|27185|disrupted in schizophrenia 1##FJ804203|DISC1|27185|disrupted in schizophrenia 1##FJ804204|DISC1|27185|disrupted in schizophrenia 1##FJ804205|DISC1|27185|disrupted in schizophrenia 1##FJ804206|DISC1|27185|disrupted in schizophrenia 1##FJ804207|DISC1|27185|disrupted in schizophrenia 1##FJ804208|DISC1|27185|disrupted in schizophrenia 1##FJ804209|DISC1|27185|disrupted in schizophrenia 1##FJ804210|DISC1|27185|disrupted in schizophrenia 1##FJ804211|DISC1|27185|disrupted in schizophrenia 1##FJ804212|DISC1|27185|disrupted in schizophrenia 1##FJ804213|DISC1|27185|disrupted in schizophrenia 1##FJ804214|DISC1|27185|disrupted in schizophrenia 1##FJ804215|DISC1|27185|disrupted in schizophrenia 1##FJ804216|DISC1|27185|disrupted in schizophrenia 1##NM_001012957|DISC1|27185|disrupted in schizophrenia 1##NM_001012958|DISC1|27185|disrupted in schizophrenia 1##NM_001012959|DISC1|27185|disrupted in schizophrenia 1##NM_001164537|DISC1|27185|disrupted in schizophrenia 1##NM_001164538|DISC1|27185|disrupted in schizophrenia 1##NM_001164539|DISC1|27185|disrupted in schizophrenia 1##NM_001164540|DISC1|27185|disrupted in schizophrenia 1##NM_001164541|DISC1|27185|disrupted in schizophrenia 1##NM_001164542|DISC1|27185|disrupted in schizophrenia 1##NM_001164544|DISC1|27185|disrupted in schizophrenia 1##NM_001164545|DISC1|27185|disrupted in schizophrenia 1##NM_001164546|DISC1|27185|disrupted in schizophrenia 1##NM_001164547|DISC1|27185|disrupted in schizophrenia 1##NM_001164548|DISC1|27185|disrupted in schizophrenia 1##NM_001164549|DISC1|27185|disrupted in schizophrenia 1##NM_001164550|DISC1|27185|disrupted in schizophrenia 1##NM_001164551|DISC1|27185|disrupted in schizophrenia 1##NM_001164552|DISC1|27185|disrupted in schizophrenia 1##NM_001164553|DISC1|27185|disrupted in schizophrenia 1##NM_001164554|DISC1|27185|disrupted in schizophrenia 1##NM_001164555|DISC1|27185|disrupted in schizophrenia 1##NM_001164556|DISC1|27185|disrupted in schizophrenia 1##NM_018662|DISC1|27185|disrupted in schizophrenia 1##AB007926|DISC1|27185|disrupted in schizophrenia 1##BC151225|DISC1|27185|disrupted in schizophrenia 1##BC142622|DISC1|27185|disrupted in schizophrenia 1##BC038954|DISC1|27185|disrupted in schizophrenia 1	0.048751	
chr13	33825660	33825731	reg1041170.p1	3.479	+	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-45531	-	AY082590 BC046563 NM_001243466 NM_178007	-65480	-	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-235172	+	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	34172	-	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	99073	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	425240	-	AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr1	53826866	53826961	reg1040250.p1	3.479	+	TSC_hg19_v1_chr1_-_53793743 NM_001018054 NM_004631 NM_017522 NM_033300	-33132	-	Z75190 D50678 BC051836 TSC_hg19_v1_chr1_-_53793738	-33251	-	DQ891289 DQ894473 AB528424 TSC_hg19_v1_chr1_-_53704191 AF035940 BC018211 AK297895 AF067173 AK312113 NM_002370	-122712	-	AK057273 NM_033067 AJ291671	98194	+	AK302085 TSC_hg19_v1_chr1_+_53925533 BC029566	98617	+	AK090634 AX746550 NM_147193	372963	-	NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##DQ891289|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##DQ894473|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF035940|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##BC018211|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK297895|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF067173|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK312113|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##NM_002370|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1	0.0	
chr16	88717980	88718094	reg1040215.p1	3.479	+	AK097127 AK125578 AK300049 AK309030 TSC_hg19_v1_chr16_-_88717462 BT006861 DQ893235 DQ896565 AB590173 BC048338 BC033739 BC006465 BC011565 BC028224 M21186 NM_000101	-588	-	AF152099 AY358471 BC069410 NM_013278 BC101835 BC112196 AF142410	-13034	+	TSC_hg19_v1_chr16_+_88636880 BC050463	-81168	+	BT006930 AB527587 DQ890562 DQ893724 TSC_hg19_v1_chr16_-_88729519 NM_002461 U49260 AB209229 BC000011	11480	-	TSC_hg19_v1_chr16_+_88729753 BX640980	11714	+	TSC_hg19_v1_chr16_+_88729781 BC015583 BC050404	11758	+	AK097127|CYBA|1535|cytochrome b-245, alpha polypeptide##AK300049|CYBA|1535|cytochrome b-245, alpha polypeptide##BT006861|CYBA|1535|cytochrome b-245, alpha polypeptide##DQ893235|CYBA|1535|cytochrome b-245, alpha polypeptide##DQ896565|CYBA|1535|cytochrome b-245, alpha polypeptide##BC033739|CYBA|1535|cytochrome b-245, alpha polypeptide##BC006465|CYBA|1535|cytochrome b-245, alpha polypeptide##BC011565|CYBA|1535|cytochrome b-245, alpha polypeptide##BC028224|CYBA|1535|cytochrome b-245, alpha polypeptide##M21186|CYBA|1535|cytochrome b-245, alpha polypeptide##NM_000101|CYBA|1535|cytochrome b-245, alpha polypeptide##AF152099|IL17C|27189|interleukin 17C##AY358471|IL17C|27189|interleukin 17C##BC069410|IL17C|27189|interleukin 17C##NM_013278|IL17C|27189|interleukin 17C##BC101835|IL17C|27189|interleukin 17C##BC112196|IL17C|27189|interleukin 17C##BC050463|ZC3H18|124245|zinc finger CCCH-type containing 18##BT006930|MVD|4597|mevalonate (diphospho) decarboxylase##DQ890562|MVD|4597|mevalonate (diphospho) decarboxylase##DQ893724|MVD|4597|mevalonate (diphospho) decarboxylase##NM_002461|MVD|4597|mevalonate (diphospho) decarboxylase##U49260|MVD|4597|mevalonate (diphospho) decarboxylase##AB209229|MVD|4597|mevalonate (diphospho) decarboxylase##BC000011|MVD|4597|mevalonate (diphospho) decarboxylase##BX640980|MGC23284|197187|uncharacterized LOC197187##BC015583|MGC23284|197187|uncharacterized LOC197187##BC050404|MGC23284|197187|uncharacterized LOC197187	0.0	
chr17	1119622	1119744	reg1035442.p1	3.479	+	TSC_hg19_v1_chr17_-_1090565 AK126882 AK124547 NM_001159746	-29095	-	AK302682 AB384846 TSC_hg19_v1_chr17_-_1083048 NM_021962 U01147	-36614	-	TSC_hg19_v1_chr17_-_1029059 AK307827	-90609	-	NM_001164405	54174	+	AB090231 NM_172367 BC142615	63281	+	TSC_hg19_v1_chr17_-_1248347 L13388	128673	-	AK126882|ABR|29|active BCR-related gene##AK124547|ABR|29|active BCR-related gene##NM_001159746|ABR|29|active BCR-related gene##AK302682|ABR|29|active BCR-related gene##NM_021962|ABR|29|active BCR-related gene##U01147|ABR|29|active BCR-related gene##AK307827|ABR|29|active BCR-related gene##NM_001164405|BHLHA9|727857|basic helix-loop-helix family, member a9##AB090231|TUSC5|286753|tumor suppressor candidate 5##NM_172367|TUSC5|286753|tumor suppressor candidate 5##BC142615|TUSC5|286753|tumor suppressor candidate 5##L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	0.0	
chr17	5110185	5110275	reg1043982.p1	3.479	+	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-14850	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-15057	-	AY143550 NM_004505 X63546 X63547	-78544	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	27871	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	75436	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	212695	-	AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##AY143550|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##NM_004505|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63546|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63547|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa	0.0	
chr18	42259290	42259419	reg1007964.p2	3.479	+	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	-1401925	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	-1563785	-	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-2724121	+	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	760	+	TSC_hg19_v1_chr18_+_42260852 AB007897 BC146776 NM_015559	1514	+	NM_001242692 AK292422	533598	+	EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1##AB007897|SETBP1|26040|SET binding protein 1##BC146776|SETBP1|26040|SET binding protein 1##NM_015559|SETBP1|26040|SET binding protein 1##NM_001242692|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2##AK292422|SLC14A2|8170|solute carrier family 14 (urea transporter), member 2	0.0	
chr1	85499228	85499338	reg1039685.p2	3.479	+	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	-36575	-	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	-140397	-	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-343207	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	14862	-	TSC_hg19_v1_chr1_-_85514184 BX647497 AK314354 NM_001253693 NM_018298	14915	-	NM_145172 AY049724 AK292603 AK054629 BC040265	28726	+	BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3##BX647497|MCOLN3|55283|mucolipin 3##AK314354|MCOLN3|55283|mucolipin 3##NM_001253693|MCOLN3|55283|mucolipin 3##NM_018298|MCOLN3|55283|mucolipin 3##NM_145172|WDR63|126820|WD repeat domain 63##AY049724|WDR63|126820|WD repeat domain 63##AK292603|WDR63|126820|WD repeat domain 63##AK054629|WDR63|126820|WD repeat domain 63##BC040265|WDR63|126820|WD repeat domain 63	0.0	
chr22	32499918	32499984	reg1015684.p2	3.479	+	TSC_hg19_v1_chr22_+_32439250 M24847 BC139838 BC139839 CU013176 CU013464 AB463272	-60693	+	TSC_hg19_v1_chr22_+_32439229 CR456579	-60728	+	TSC_hg19_v1_chr22_+_32439103 AK312948	-60838	+	BC139845 CU012997 CU013285 AB527618 CR456485 NM_001010859 BC040263	55303	-	BC069827 BC069737 AJ010231 NM_006605	89474	-	CR456563 NM_001159546	98565	-	M24847|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139838|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139839|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CU013176|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CU013464|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##CR456579|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##AK312948|SLC5A1|6523|solute carrier family 5 (sodium/glucose cotransporter), member 1##BC139845|C22orf42|150297|chromosome 22 open reading frame 42##CR456485|C22orf42|150297|chromosome 22 open reading frame 42##NM_001010859|C22orf42|150297|chromosome 22 open reading frame 42##BC040263|C22orf42|150297|chromosome 22 open reading frame 42##BC069827|RFPL2|10739|ret finger protein-like 2##BC069737|RFPL2|10739|ret finger protein-like 2##AJ010231|RFPL2|10739|ret finger protein-like 2##NM_006605|RFPL2|10739|ret finger protein-like 2##CR456563|RFPL2|10739|ret finger protein-like 2##NM_001159546|RFPL2|10739|ret finger protein-like 2	0.0	
chr2	86422418	86422501	reg1036555.p1	3.479	+	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	-89118	+	NM_015425	-89182	-	BC117173 BC126303 BC143345 BC073968 U33460 TSC_hg19_v1_chr2_-_86333002 AK307490 AK302458	-89476	-	AB527791 CR456793 CU677950 EU831472 EU831559 TSC_hg19_v1_chr2_-_86422566 AY232292 AK300017 BC002412 AK296676 AY921637 AK312251 AK299014 AK309004 AK225780 AK304197 BC005983 BC107419 D21091 D21094	88	-	TSC_hg19_v1_chr2_-_86422614 BX537369 L42572	196	-	NM_001100169 NM_001100170 NM_006839	433	-	NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3##NM_015425|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC117173|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC126303|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC143345|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##BC073968|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##U33460|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK307490|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##AK302458|POLR1A|25885|polymerase (RNA) I polypeptide A, 194kDa##CR456793|IMMT|10989|inner membrane protein, mitochondrial##EU831472|IMMT|10989|inner membrane protein, mitochondrial##EU831559|IMMT|10989|inner membrane protein, mitochondrial##AY232292|IMMT|10989|inner membrane protein, mitochondrial##AK300017|IMMT|10989|inner membrane protein, mitochondrial##BC002412|IMMT|10989|inner membrane protein, mitochondrial##AK296676|IMMT|10989|inner membrane protein, mitochondrial##AY921637|IMMT|10989|inner membrane protein, mitochondrial##AK312251|IMMT|10989|inner membrane protein, mitochondrial##AK299014|IMMT|10989|inner membrane protein, mitochondrial##AK309004|IMMT|10989|inner membrane protein, mitochondrial##AK225780|IMMT|10989|inner membrane protein, mitochondrial##AK304197|IMMT|10989|inner membrane protein, mitochondrial##BC005983|IMMT|10989|inner membrane protein, mitochondrial##BC107419|IMMT|10989|inner membrane protein, mitochondrial##D21091|IMMT|10989|inner membrane protein, mitochondrial##D21094|IMMT|10989|inner membrane protein, mitochondrial##BX537369|IMMT|10989|inner membrane protein, mitochondrial##L42572|IMMT|10989|inner membrane protein, mitochondrial##NM_001100169|IMMT|10989|inner membrane protein, mitochondrial##NM_001100170|IMMT|10989|inner membrane protein, mitochondrial##NM_006839|IMMT|10989|inner membrane protein, mitochondrial	0.0	
chr3	105041939	105042019	reg1037805.p2	3.479	+	AY090780 NM_175056 BC143817	-2888112	+	TSC_hg19_v1_chr3_+_101568357 AK091782 AX747180 BC060800 NM_031419 AB037925	-3473605	+	NM_001005474 AB074898 AF548362 DQ224339 AK054787 AF147393	-3495019	+	TSC_hg19_v1_chr3_+_105085562 NM_001243280 NM_001243281 NM_001243283 NM_001627 AK054632	43601	+	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	43843	+	CR749655 TSC_hg19_v1_chr3_-_105421064	379075	-	AY090780|ZPLD1|131368|zona pellucida-like domain containing 1##NM_175056|ZPLD1|131368|zona pellucida-like domain containing 1##BC143817|ZPLD1|131368|zona pellucida-like domain containing 1##AK091782|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##BC060800|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_031419|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB037925|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001005474|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AB074898|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AF548362|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##DQ224339|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##AK054787|NFKBIZ|64332|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta##NM_001243280|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243281|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001243283|ALCAM|214|activated leukocyte cell adhesion molecule##NM_001627|ALCAM|214|activated leukocyte cell adhesion molecule##AK054632|ALCAM|214|activated leukocyte cell adhesion molecule##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b	0.0	
chr3	171178112	171178200	reg1035035.p1	3.479	+	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-85	-	NM_000340	-433389	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-433623	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	350099	-	NM_001164436 AK026825	382992	+	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	579259	+	AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B	0.0	
chr4	115575911	115576038	reg1041327.p1	3.479	+	NM_003360 U30930	-32452	+	TSC_hg19_v1_chr4_+_115519557 AK127970 NM_001128174	-56391	+	AK307532 TSC_hg19_v1_chr4_-_114900840 AY358647 NM_024590	-675135	-	BC113075 BC012326 AK289670 AB036429 NM_022569	459007	-	AK074617 BC030831 NM_152402	2430759	-	TSC_hg19_v1_chr4_+_118954764 AY358852	3378797	+	NM_003360|UGT8|7368|UDP glycosyltransferase 8##U30930|UGT8|7368|UDP glycosyltransferase 8##AK127970|UGT8|7368|UDP glycosyltransferase 8##NM_001128174|UGT8|7368|UDP glycosyltransferase 8##AK307532|ARSJ|79642|arylsulfatase family, member J##AY358647|ARSJ|79642|arylsulfatase family, member J##NM_024590|ARSJ|79642|arylsulfatase family, member J##BC113075|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##BC012326|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK289670|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AB036429|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##NM_022569|NDST4|64579|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 4##AK074617|TRAM1L1|133022|translocation associated membrane protein 1-like 1##BC030831|TRAM1L1|133022|translocation associated membrane protein 1-like 1##NM_152402|TRAM1L1|133022|translocation associated membrane protein 1-like 1##AY358852|NDST3|9348|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	0.0	
chr6	134495538	134495719	reg1005448.p2	3.479	+	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	-121925	-	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	-221283	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	-222264	+	CU674630 Y10032 AF153609 BC001263 FM205710 TSC_hg19_v1_chr6_-_134496003 AK098509 AK295422 BX649005	346	-	TSC_hg19_v1_chr6_-_134496010 NM_005627	391	-	FM205707 TSC_hg19_v1_chr6_-_134496850	1233	-	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1##Y10032|SGK1|6446|serum/glucocorticoid regulated kinase 1##AF153609|SGK1|6446|serum/glucocorticoid regulated kinase 1##BC001263|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205710|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK098509|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK295422|SGK1|6446|serum/glucocorticoid regulated kinase 1##BX649005|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_005627|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205707|SGK1|6446|serum/glucocorticoid regulated kinase 1	0.0	
chr6	34641742	34641860	reg1027548.p2	3.479	+	AB031549 BC021299 AF071538 AK301543 NM_001252294 NM_012391	-117705	-	TSC_hg19_v1_chr6_+_34482648 AK294132 NM_001199583 BC040228	-159147	+	TSC_hg19_v1_chr6_+_34433880 AK289956 NM_020804 AB037800 AL834211 AF242529	-207897	+	TSC_hg19_v1_chr6_-_34664565 AK313410 BC002328 BC010184 AK056964 BC075810	22745	-	TSC_hg19_v1_chr6_-_34664631 NM_022758 NM_024294	22825	-	NM_003093	83069	+	AB031549|SPDEF|25803|SAM pointed domain containing ets transcription factor##BC021299|SPDEF|25803|SAM pointed domain containing ets transcription factor##AF071538|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK301543|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_001252294|SPDEF|25803|SAM pointed domain containing ets transcription factor##NM_012391|SPDEF|25803|SAM pointed domain containing ets transcription factor##AK294132|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_001199583|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##BC040228|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK289956|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##NM_020804|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AB037800|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AL834211|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AF242529|PACSIN1|29993|protein kinase C and casein kinase substrate in neurons 1##AK313410|C6orf106|64771|chromosome 6 open reading frame 106##BC002328|C6orf106|64771|chromosome 6 open reading frame 106##BC010184|C6orf106|64771|chromosome 6 open reading frame 106##AK056964|C6orf106|64771|chromosome 6 open reading frame 106##BC075810|C6orf106|64771|chromosome 6 open reading frame 106##NM_022758|C6orf106|64771|chromosome 6 open reading frame 106##NM_024294|C6orf106|64771|chromosome 6 open reading frame 106##NM_003093|SNRPC|6631|small nuclear ribonucleoprotein polypeptide C	0.020484	
chr7	105698414	105698595	reg1000856.p4	3.479	+	NM_152750 AK126338 AK131293 AK304118 BC111696 BC111738 AK304352	-94806	+	TSC_hg19_v1_chr7_+_105517250 AK125261	-181240	+	TSC_hg19_v1_chr7_-_105516938 AK095475 AK097574 BC030616 NM_020725 NM_152749	-181519	-	X61382 CU677735 TSC_hg19_v1_chr7_-_105752712	54177	-	TSC_hg19_v1_chr7_-_105752748 BC020938 BC016835 NM_182715	54240	-	CU687506 EU831812 EU831889 BC061887 S72481 X68194 AK292230 TSC_hg19_v1_chr7_-_105753022 NM_006754	54511	-	NM_152750|CDHR3|222256|cadherin-related family member 3##AK126338|CDHR3|222256|cadherin-related family member 3##AK131293|CDHR3|222256|cadherin-related family member 3##AK304118|CDHR3|222256|cadherin-related family member 3##BC111696|CDHR3|222256|cadherin-related family member 3##BC111738|CDHR3|222256|cadherin-related family member 3##AK304352|CDHR3|222256|cadherin-related family member 3##AK125261|CDHR3|222256|cadherin-related family member 3##AK095475|ATXN7L1|222255|ataxin 7-like 1##AK097574|ATXN7L1|222255|ataxin 7-like 1##BC030616|ATXN7L1|222255|ataxin 7-like 1##NM_020725|ATXN7L1|222255|ataxin 7-like 1##NM_152749|ATXN7L1|222255|ataxin 7-like 1##X61382|SYPL1|6856|synaptophysin-like 1##BC020938|SYPL1|6856|synaptophysin-like 1##BC016835|SYPL1|6856|synaptophysin-like 1##NM_182715|SYPL1|6856|synaptophysin-like 1##EU831812|SYPL1|6856|synaptophysin-like 1##EU831889|SYPL1|6856|synaptophysin-like 1##BC061887|SYPL1|6856|synaptophysin-like 1##S72481|SYPL1|6856|synaptophysin-like 1##X68194|SYPL1|6856|synaptophysin-like 1##AK292230|SYPL1|6856|synaptophysin-like 1##NM_006754|SYPL1|6856|synaptophysin-like 1	0.020977	
chr9	129822577	129822674	reg1025138.p2	3.479	+	AF221098 NM_001190728 AB385313 CU689706	-98090	+	TSC_hg19_v1_chr9_+_129677073 AB002349 NM_001190729 NM_001190730 NM_014636 BC033708 BC019329 AK299149 BC032372	-145521	+	TSC_hg19_v1_chr9_+_129622936 AB082524 NM_001099270	-199681	+	AK075026 TSC_hg19_v1_chr9_-_129870392	47727	-	TSC_hg19_v1_chr9_-_129884914 AK074726 BC012368 AK307175	62283	-	TSC_hg19_v1_chr9_-_129884962 AK312876	62337	-	AF221098|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190728|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB002349|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190729|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_001190730|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##NM_014636|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC033708|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC019329|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AK299149|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##BC032372|RALGPS1|9649|Ral GEF with PH domain and SH3 binding motif 1##AB082524|ZBTB34|403341|zinc finger and BTB domain containing 34##NM_001099270|ZBTB34|403341|zinc finger and BTB domain containing 34##AK075026|ANGPTL2|23452|angiopoietin-like 2##AK074726|ANGPTL2|23452|angiopoietin-like 2##BC012368|ANGPTL2|23452|angiopoietin-like 2##AK312876|ANGPTL2|23452|angiopoietin-like 2	0.0	
chrX	130809736	130809847	reg1045893.p1	3.479	+	BC137050 AB529233 NM_001004486	-131793	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-386379	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-386529	-	TSC_hg19_v1_chrX_-_130964633 AK097911	154860	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	347530	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	347849	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.823175	CTCF.p2:9:0.823
chrX	40731038	40731124	reg1038617.p2	3.479	+	TSC_hg19_v1_chrX_-_40595139 AK308871	-135952	-	TSC_hg19_v1_chrX_-_40594999 AK293070	-136101	-	TSC_hg19_v1_chrX_-_40594795 AB006651 AF304448 BC098377 NM_004229	-136293	-	TSC_hg19_v1_chrX_+_40944880 NM_001039590 NM_001039591	213791	+	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	461569	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	462376	+	AK308871|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14##AB006651|MED14|9282|mediator complex subunit 14##AF304448|MED14|9282|mediator complex subunit 14##BC098377|MED14|9282|mediator complex subunit 14##NM_004229|MED14|9282|mediator complex subunit 14##NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked##NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	0.0	
chr10	110009852	110009968	reg1042090.p2	3.478	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-1085534	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-1550851	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-3608865	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	1673299	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	1673367	-	NM_019903 AB209810 BC057285	1755871	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.906879	CTCF.p2:-4:0.907
chr10	79261878	79261997	reg1039807.p2	3.478	+	AF267860 NM_032024	-1719419	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-2100372	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-2100456	-	AF118141 TSC_hg19_v1_chr10_-_79397246	135288	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	135399	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	135469	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.090615	
chr11	1674237	1674317	reg1006779.p2	3.478	+	AB126074 AJ628247 NM_001001480	-23259	+	AB528165 AB126073 NM_001012709	-30932	-	AY597812 AB528164 AB126072 NM_001012708	-44624	-	AB126075 NM_001012416 BC130399 BC133035	44161	+	TSC_hg19_v1_chr11_-_1769086 AK289574	94863	-	NM_001170820 TSC_hg19_v1_chr11_-_1771824	97547	-	AB126074|KRTAP5-5|439915|keratin associated protein 5-5##AJ628247|KRTAP5-5|439915|keratin associated protein 5-5##NM_001001480|KRTAP5-5|439915|keratin associated protein 5-5##AB126073|KRTAP5-4|387267|keratin associated protein 5-4##NM_001012709|KRTAP5-4|387267|keratin associated protein 5-4##AY597812|KRTAP5-3|387266|keratin associated protein 5-3##AB126072|KRTAP5-3|387266|keratin associated protein 5-3##NM_001012708|KRTAP5-3|387266|keratin associated protein 5-3##AB126075|KRTAP5-6|440023|keratin associated protein 5-6##NM_001012416|KRTAP5-6|440023|keratin associated protein 5-6##BC130399|KRTAP5-6|440023|keratin associated protein 5-6##BC133035|KRTAP5-6|440023|keratin associated protein 5-6##AK289574|IFITM10|402778|interferon induced transmembrane protein 10##NM_001170820|IFITM10|402778|interferon induced transmembrane protein 10	0.032141	
chr11	34127399	34127542	reg1023120.p2	3.478	+	TSC_hg19_v1_chr11_+_34127208 AK294044 AL136882 AK001636 BC014440 BC020205	-220	+	NM_001144030 NM_024662 TSC_hg19_v1_chr11_+_34127175 AK022241 AK225341 BC035558 AB051496	-313	+	TSC_hg19_v1_chr11_+_34073956 EU176359 EU176467 EU176701	-53433	+	TSC_hg19_v1_chr11_-_34379556 AK291744 NM_145804	252085	-	TSC_hg19_v1_chr11_+_34460487 AK291585 NM_001752 BC110398 AK315350 X04076 BC112217 BC112219	333004	+	TSC_hg19_v1_chr11_+_34460533 AB587573 AY028632 HQ258304	333079	+	AK294044|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AL136882|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK001636|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC014440|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC020205|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_001144030|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##NM_024662|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK022241|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AK225341|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##BC035558|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##AB051496|NAT10|55226|N-acetyltransferase 10 (GCN5-related)##EU176359|CAPRIN1|4076|cell cycle associated protein 1##EU176467|CAPRIN1|4076|cell cycle associated protein 1##EU176701|CAPRIN1|4076|cell cycle associated protein 1##AK291744|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##NM_145804|ABTB2|25841|ankyrin repeat and BTB (POZ) domain containing 2##AK291585|CAT|847|catalase##NM_001752|CAT|847|catalase##BC110398|CAT|847|catalase##AK315350|CAT|847|catalase##X04076|CAT|847|catalase##BC112217|CAT|847|catalase##BC112219|CAT|847|catalase##AY028632|CAT|847|catalase##HQ258304|CAT|847|catalase	0.0	
chr11	61658558	61658703	reg1031251.p1	3.478	+	AK074939 BC009011 TSC_hg19_v1_chr11_+_61595772 AF126799 AB529115	-62814	+	TSC_hg19_v1_chr11_+_61595676 AF084559 NM_004265	-62929	+	AK074754 AK074819 TSC_hg19_v1_chr11_-_61584464 NM_013402	-74141	-	AB529172 DQ892880 DQ896129 CU678796 TSC_hg19_v1_chr11_-_61659018 AF134404 AK295473 AK310523 AF084560 BC004901 NM_021727	324	-	TSC_hg19_v1_chr11_-_61684983 BC022239 NM_013401	26358	-	BC015220 NM_001139443 NM_004183	58725	+	AK074939|FADS2|9415|fatty acid desaturase 2##BC009011|FADS2|9415|fatty acid desaturase 2##AF126799|FADS2|9415|fatty acid desaturase 2##AF084559|FADS2|9415|fatty acid desaturase 2##NM_004265|FADS2|9415|fatty acid desaturase 2##AK074754|FADS1|3992|fatty acid desaturase 1##AK074819|FADS1|3992|fatty acid desaturase 1##NM_013402|FADS1|3992|fatty acid desaturase 1##DQ892880|FADS3|3995|fatty acid desaturase 3##DQ896129|FADS3|3995|fatty acid desaturase 3##AF134404|FADS3|3995|fatty acid desaturase 3##AK295473|FADS3|3995|fatty acid desaturase 3##AK310523|FADS3|3995|fatty acid desaturase 3##AF084560|FADS3|3995|fatty acid desaturase 3##BC004901|FADS3|3995|fatty acid desaturase 3##NM_021727|FADS3|3995|fatty acid desaturase 3##BC022239|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##NM_013401|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##BC015220|BEST1|7439|bestrophin 1##NM_001139443|BEST1|7439|bestrophin 1##NM_004183|BEST1|7439|bestrophin 1	0.03247	
chr12	125346700	125346849	reg1041215.p2	3.478	+	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	-294699	-	TSC_hg19_v1_chr12_-_125002875 BC033087	-343915	-	AK126577 NM_181709	-573065	+	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	1531	-	TSC_hg19_v1_chr12_-_125348408 AB209436 BC022087 BC080647 AK304730	1603	-	TSC_hg19_v1_chr12_-_125348461 NM_001082959 NM_005505	1699	-	AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1##AB209436|SCARB1|949|scavenger receptor class B, member 1##BC022087|SCARB1|949|scavenger receptor class B, member 1##BC080647|SCARB1|949|scavenger receptor class B, member 1##AK304730|SCARB1|949|scavenger receptor class B, member 1##NM_001082959|SCARB1|949|scavenger receptor class B, member 1##NM_005505|SCARB1|949|scavenger receptor class B, member 1	0.0	
chr12	46940836	46940932	reg1031301.p2	3.478	+	TSC_hg19_v1_chr12_-_46766619 NM_018976	-174281	-	TSC_hg19_v1_chr12_-_46766555 AK291644 BC040342 AK001700 AJ344099 AF298897	-174595	-	NM_001077484 NM_030674	-277677	-	AF305814 AF193836 AK001053 AK291168 NM_001143824 NM_018018	278872	-	TSC_hg19_v1_chr12_+_47473404 BC072670	532513	+	AL833007 AK091761 AX747169 AY454159 BC047595 TSC_hg19_v1_chr12_-_47473732 BC095477 NM_001143668 NM_181847	532699	-	NM_018976|SLC38A2|54407|solute carrier family 38, member 2##AK291644|SLC38A2|54407|solute carrier family 38, member 2##BC040342|SLC38A2|54407|solute carrier family 38, member 2##AK001700|SLC38A2|54407|solute carrier family 38, member 2##AJ344099|SLC38A2|54407|solute carrier family 38, member 2##AF298897|SLC38A2|54407|solute carrier family 38, member 2##NM_001077484|SLC38A1|81539|solute carrier family 38, member 1##NM_030674|SLC38A1|81539|solute carrier family 38, member 1##AF305814|SLC38A4|55089|solute carrier family 38, member 4##AF193836|SLC38A4|55089|solute carrier family 38, member 4##AK001053|SLC38A4|55089|solute carrier family 38, member 4##AK291168|SLC38A4|55089|solute carrier family 38, member 4##NM_001143824|SLC38A4|55089|solute carrier family 38, member 4##NM_018018|SLC38A4|55089|solute carrier family 38, member 4##BC072670|FAM113B|91523|family with sequence similarity 113, member B##AL833007|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AK091761|AMIGO2|347902|adhesion molecule with Ig-like domain 2##AY454159|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC047595|AMIGO2|347902|adhesion molecule with Ig-like domain 2##BC095477|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_001143668|AMIGO2|347902|adhesion molecule with Ig-like domain 2##NM_181847|AMIGO2|347902|adhesion molecule with Ig-like domain 2	0.0	
chr12	52680890	52681007	reg1040458.p1	3.478	+	TSC_hg19_v1_chr12_+_52627029 AK025881 AK128848 AF509887 AJ238246 X03212 AK128505 AK225498 BC002700 DQ892996 DQ896244 AB590146 CU678130	-53905	+	NM_005556 TSC_hg19_v1_chr12_+_52626966	-53986	+	BC117348 BC126393 BC038743 NM_001242696	-76385	-	AB527612 HQ258431 BC117465 BC117467 NM_002281	4325	-	NM_002284 BC069585 CU686916 X99142	14730	+	BC126935 BC128063 BC069546 X99141 AK314904 NM_002282	34212	-	AK025881|KRT7|3855|keratin 7##AK128848|KRT7|3855|keratin 7##AF509887|KRT7|3855|keratin 7##AJ238246|KRT7|3855|keratin 7##X03212|KRT7|3855|keratin 7##AK128505|KRT7|3855|keratin 7##AK225498|KRT7|3855|keratin 7##BC002700|KRT7|3855|keratin 7##DQ892996|KRT7|3855|keratin 7##DQ896244|KRT7|3855|keratin 7##NM_005556|KRT7|3855|keratin 7##BC117348|LOC283403|283403|uncharacterized LOC283403##BC126393|LOC283403|283403|uncharacterized LOC283403##BC038743|LOC283403|283403|uncharacterized LOC283403##NM_001242696|LOC283403|283403|uncharacterized LOC283403##HQ258431|KRT81|3887|keratin 81##BC117465|KRT81|3887|keratin 81##BC117467|KRT81|3887|keratin 81##NM_002281|KRT81|3887|keratin 81##NM_002284|KRT86|3892|keratin 86##BC069585|KRT86|3892|keratin 86##X99142|KRT86|3892|keratin 86##BC126935|KRT83|3889|keratin 83##BC128063|KRT83|3889|keratin 83##BC069546|KRT83|3889|keratin 83##X99141|KRT83|3889|keratin 83##AK314904|KRT83|3889|keratin 83##NM_002282|KRT83|3889|keratin 83	0.773131	CTCF.p2:-30:0.773
chr14	25876092	25876191	reg1034909.p1	3.478	+	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	-356903	-	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-772723	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-797280	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1190847	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	3360087	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	3360772	+	BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1	0.997055	CTCF.p2:4:0.997
chr15	79104003	79104102	reg1033818.p1	3.478	+	AY327122 AF140675 TSC_hg19_v1_chr15_-_79103698 BC061631 NM_014272 AK299844	-302	-	TSC_hg19_v1_chr15_+_79102818 AK095823	-1225	+	TSC_hg19_v1_chr15_-_78933573 U62439 Y08416 BC096080 BC096081 BC096082 BC096083 NM_000750 U48861	-170479	-	TSC_hg19_v1_chr15_+_79165157 NM_006791 NM_206839	61122	+	TSC_hg19_v1_chr15_+_79165283 AK098485 AF218011 AF100615 AY148481 AK296650 BC002936 BC022845	61195	+	TSC_hg19_v1_chr15_+_79165314 AK310702 BC141840 AF070664 AF167173 AK310592 AL137697 AF109188 AF161546	61267	+	AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AK095823|MORF4L1|10933|mortality factor 4 like 1##U62439|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##Y08416|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096080|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096081|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096082|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096083|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##NM_000750|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##U48861|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##NM_006791|MORF4L1|10933|mortality factor 4 like 1##NM_206839|MORF4L1|10933|mortality factor 4 like 1##AK098485|MORF4L1|10933|mortality factor 4 like 1##AF218011|MORF4L1|10933|mortality factor 4 like 1##AF100615|MORF4L1|10933|mortality factor 4 like 1##AY148481|MORF4L1|10933|mortality factor 4 like 1##AK296650|MORF4L1|10933|mortality factor 4 like 1##BC002936|MORF4L1|10933|mortality factor 4 like 1##BC022845|MORF4L1|10933|mortality factor 4 like 1##AK310702|MORF4L1|10933|mortality factor 4 like 1##BC141840|MORF4L1|10933|mortality factor 4 like 1##AF070664|MORF4L1|10933|mortality factor 4 like 1##AF167173|MORF4L1|10933|mortality factor 4 like 1##AK310592|MORF4L1|10933|mortality factor 4 like 1##AL137697|MORF4L1|10933|mortality factor 4 like 1##AF109188|MORF4L1|10933|mortality factor 4 like 1##AF161546|MORF4L1|10933|mortality factor 4 like 1	0.993874	CTCF.p2:-33:0.994
chr17	41446669	41446771	reg1044815.p2	3.478	+	TSC_hg19_v1_chr17_+_41363905 AK056132 AK290387 AK299974 AK301571 NM_145041	-82841	+	TSC_hg19_v1_chr17_+_41323230 AK299328 AK290005 AK297425 BC012591 X76952 NM_005899 BC009808 AY450308	-123498	+	TSC_hg19_v1_chr17_+_41322538 D30756 NM_031862 AF227189 NM_031858	-124227	+	AL832479 TSC_hg19_v1_chr17_-_41465694 AK123585 AK311685	18970	-	TSC_hg19_v1_chr17_+_41476360 NM_001661 AK314951 BC000043 AB060692 L38490	29647	+	AK294046 TSC_hg19_v1_chr17_+_41561351 BC020697 AK303319 D50487 NM_004941 AK291664	114577	+	AK056132|TMEM106A|113277|transmembrane protein 106A##AK290387|TMEM106A|113277|transmembrane protein 106A##AK299974|TMEM106A|113277|transmembrane protein 106A##AK301571|TMEM106A|113277|transmembrane protein 106A##NM_145041|TMEM106A|113277|transmembrane protein 106A##AK299328|NBR1|4077|neighbor of BRCA1 gene 1##AK290005|NBR1|4077|neighbor of BRCA1 gene 1##AK297425|NBR1|4077|neighbor of BRCA1 gene 1##X76952|NBR1|4077|neighbor of BRCA1 gene 1##NM_005899|NBR1|4077|neighbor of BRCA1 gene 1##BC009808|NBR1|4077|neighbor of BRCA1 gene 1##AY450308|NBR1|4077|neighbor of BRCA1 gene 1##D30756|NBR1|4077|neighbor of BRCA1 gene 1##NM_031862|NBR1|4077|neighbor of BRCA1 gene 1##AF227189|NBR1|4077|neighbor of BRCA1 gene 1##NM_031858|NBR1|4077|neighbor of BRCA1 gene 1##AL832479|LOC100130581|100130581|uncharacterized LOC100130581##AK123585|LOC100130581|100130581|uncharacterized LOC100130581##AK311685|LOC100130581|100130581|uncharacterized LOC100130581##NM_001661|ARL4D|379|ADP-ribosylation factor-like 4D##AK314951|ARL4D|379|ADP-ribosylation factor-like 4D##BC000043|ARL4D|379|ADP-ribosylation factor-like 4D##AB060692|ARL4D|379|ADP-ribosylation factor-like 4D##L38490|ARL4D|379|ADP-ribosylation factor-like 4D##AK294046|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##BC020697|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK303319|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##D50487|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##NM_004941|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8##AK291664|DHX8|1659|DEAH (Asp-Glu-Ala-His) box polypeptide 8	0.0	
chr18	60975169	60975337	reg1032360.p2	3.478	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-179318	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-590945	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-591327	+	BC027258 NM_000633 NM_000657	11307	-	TSC_hg19_v1_chr18_-_60986977 X06487	11740	-	TSC_hg19_v1_chr18_-_60987309 M13994	12033	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr2	11093803	11093870	reg1036811.p1	3.478	+	BC026110 NM_002236 TSC_hg19_v1_chr2_+_11052109	-41751	+	TSC_hg19_v1_chr2_-_10952912 AK294347 D49489 BC001312 NM_005742	-140916	-	TSC_hg19_v1_chr2_-_10952851 DQ891186 DQ894369 AK289428	-141008	-	AK057872 NM_182500 BC120930 AK292828	179380	+	BC027625 NM_152391 TSC_hg19_v1_chr2_+_11295562	201715	+	TSC_hg19_v1_chr2_+_11295592 AK001091	201745	+	BC026110|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##NM_002236|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6##D49489|PDIA6|10130|protein disulfide isomerase family A, member 6##BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6##NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6##AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6##AK057872|C2orf50|130813|chromosome 2 open reading frame 50##NM_182500|C2orf50|130813|chromosome 2 open reading frame 50##BC120930|C2orf50|130813|chromosome 2 open reading frame 50##AK292828|C2orf50|130813|chromosome 2 open reading frame 50##BC027625|PQLC3|130814|PQ loop repeat containing 3##NM_152391|PQLC3|130814|PQ loop repeat containing 3##AK001091|PQLC3|130814|PQ loop repeat containing 3	0.0	
chr2	197278889	197278957	reg1031649.p2	3.478	+	TSC_hg19_v1_chr2_-_197036310 NM_004226	-242605	-	BC052561 AB011421 BC016040 TSC_hg19_v1_chr2_-_197036280	-242644	-	AB463018 AF327442 AK094515 NM_018897 AB023161	-345428	-	BC117194 BC117198 AB037722 NM_020760	178369	-	AK302685 AK096979 NM_001080539 TSC_hg19_v1_chr2_+_197504417 AK303236 AK299214 AK309349	225434	+	AB385239 BC043347 BC036952 TSC_hg19_v1_chr2_-_197664407 AF465407 AK025560 AF133123 AK314718 NM_001206774 NM_012086	385490	-	NM_004226|STK17B|9262|serine/threonine kinase 17b##BC052561|STK17B|9262|serine/threonine kinase 17b##AB011421|STK17B|9262|serine/threonine kinase 17b##BC016040|STK17B|9262|serine/threonine kinase 17b##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7##BC117194|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##BC117198|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AB037722|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##NM_020760|HECW2|57520|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2##AK302685|CCDC150|284992|coiled-coil domain containing 150##AK096979|CCDC150|284992|coiled-coil domain containing 150##NM_001080539|CCDC150|284992|coiled-coil domain containing 150##AK303236|CCDC150|284992|coiled-coil domain containing 150##AK299214|CCDC150|284992|coiled-coil domain containing 150##AK309349|CCDC150|284992|coiled-coil domain containing 150##BC043347|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##BC036952|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF465407|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK025560|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AF133123|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##AK314718|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_001206774|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa##NM_012086|GTF3C3|9330|general transcription factor IIIC, polypeptide 3, 102kDa	0.0	
chr2	96987728	96987885	reg1042543.p1	3.478	+	BC015425 TSC_hg19_v1_chr2_-_96987632 BC053735	-176	-	NM_014014 TSC_hg19_v1_chr2_-_96971311	-16483	-	TSC_hg19_v1_chr2_-_96971269 AK090671 AX746566	-16530	-	TSC_hg19_v1_chr2_+_96991042 NM_001008949 NM_001163523 BC073153	3280	+	NM_178495 NM_001163524 BC034503	4142	+	TSC_hg19_v1_chr2_+_97001479 NM_015341	13670	+	NM_014014|SNRNP200|23020|small nuclear ribonucleoprotein 200kDa (U5)##AK090671|SNRNP200|23020|small nuclear ribonucleoprotein 200kDa (U5)##NM_001008949|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163523|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC073153|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_178495|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_001163524|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##BC034503|ITPRIPL1|150771|inositol 1,4,5-trisphosphate receptor interacting protein-like 1##NM_015341|NCAPH|23397|non-SMC condensin I complex, subunit H	0.0	
chr4	2748121	2748210	reg1040392.p2	3.478	+	AB000459 AB000460 AB000461 NM_003704 BC136646 BC144337 BC144339 BC144340	-120992	+	NM_001185009 BC031935	-276985	+	TSC_hg19_v1_chr4_+_2470846 AK312534 AK309509 U95140	-277289	+	AK026176 NM_001161527	9585	-	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	9898	-	TSC_hg19_v1_chr4_+_2794755 AK225497 NM_001122681 BC022996	46570	+	AB000459|FAM193A|8603|family with sequence similarity 193, member A##AB000460|FAM193A|8603|family with sequence similarity 193, member A##AB000461|FAM193A|8603|family with sequence similarity 193, member A##NM_003704|FAM193A|8603|family with sequence similarity 193, member A##BC136646|FAM193A|8603|family with sequence similarity 193, member A##BC144337|FAM193A|8603|family with sequence similarity 193, member A##BC144339|FAM193A|8603|family with sequence similarity 193, member A##BC144340|FAM193A|8603|family with sequence similarity 193, member A##NM_001185009|RNF4|6047|ring finger protein 4##BC031935|RNF4|6047|ring finger protein 4##AK312534|RNF4|6047|ring finger protein 4##AK309509|RNF4|6047|ring finger protein 4##U95140|RNF4|6047|ring finger protein 4##AK026176|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001161527|TNIP2|79155|TNFAIP3 interacting protein 2##AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2##AK225497|SH3BP2|6452|SH3-domain binding protein 2##NM_001122681|SH3BP2|6452|SH3-domain binding protein 2##BC022996|SH3BP2|6452|SH3-domain binding protein 2	0.0	
chr4	7847614	7847739	reg1039324.p2	3.478	+	BC034552 BC048325 TSC_hg19_v1_chr4_-_7436631 BC068579 DQ991252 NM_001085382	-411020	-	TSC_hg19_v1_chr4_+_7194317 NM_020777 AF286190	-653281	+	TSC_hg19_v1_chr4_-_7069801 AF087896	-777875	-	TSC_hg19_v1_chr4_-_7941589 AK297631 AK290807 NM_001134647 NM_198595	93712	-	TSC_hg19_v1_chr4_-_8073714 AK094798	226040	-	TSC_hg19_v1_chr4_-_8129388 AK301060	281709	-	BC034552|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC048325|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##BC068579|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##DQ991252|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_001085382|PSAPL1|768239|prosaposin-like 1 (gene/pseudogene)##NM_020777|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF286190|SORCS2|57537|sortilin-related VPS10 domain containing receptor 2##AF087896|GRPEL1|80273|GrpE-like 1, mitochondrial (E. coli)##AK297631|AFAP1|60312|actin filament associated protein 1##AK290807|AFAP1|60312|actin filament associated protein 1##NM_001134647|AFAP1|60312|actin filament associated protein 1##NM_198595|AFAP1|60312|actin filament associated protein 1##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2	0.697175	CTCF.p2:-4:0.697
chr7	130716378	130716478	reg1034860.p1	3.478	+	AF490374 NM_138693 TSC_hg19_v1_chr7_-_130418967	-297501	-	AF294347 AF431815 BC038415 NM_052933	-345073	-	TSC_hg19_v1_chr7_-_130353589 AK291409 NM_012133	-362833	-	TSC_hg19_v1_chr7_-_130792857 BC047367	76431	-	AK294384 NM_001145354	78426	+	NM_013255 TSC_hg19_v1_chr7_+_131012611	296178	+	AF490374|KLF14|136259|Kruppel-like factor 14##NM_138693|KLF14|136259|Kruppel-like factor 14##AF294347|TSGA13|114960|testis specific, 13##AF431815|TSGA13|114960|testis specific, 13##BC038415|TSGA13|114960|testis specific, 13##NM_052933|TSGA13|114960|testis specific, 13##AK291409|COPG2|26958|coatomer protein complex, subunit gamma 2##NM_012133|COPG2|26958|coatomer protein complex, subunit gamma 2##BC047367|FLJ43663|378805|uncharacterized LOC378805##AK294384|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_001145354|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##NM_013255|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs	0.0	
chr7	76691305	76691404	reg1042943.p2	3.478	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-434807	-	TSC_hg19_v1_chr7_-_76256148 BC017101	-435151	-	TSC_hg19_v1_chr7_+_76178675 BC078169	-512679	+	BC036053 NM_020879 BX649000 AK292491 HM370402	60592	+	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	137782	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	354364	-	BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC017101|POMZP3|22932|POM121 and ZP3 fusion##BC078169|LOC100133091|100133091|uncharacterized LOC100133091##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)	0.347044	CTCF.p2:-11:0.347
chr9	118705536	118705626	reg1039316.p1	3.478	+	AB022761 NM_017418	-801485	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-825108	-	AK313619 NM_001244 NM_001252290	-1012707	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	210489	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	743881	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	744025	+	AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32	0.0	
chrX	27573781	27573872	reg1044161.p1	3.478	+	AK097561 BC067286 NM_173523	-1363270	+	NM_173699 BC029525 AK057361	-1417340	+	NM_139058 TSC_hg19_v1_chrX_-_25034074	-2539753	-	BC157859 NM_001136533	191099	+	AK057527 NM_182506 BC101307 BC101309 BC101310	252289	+	AK128123 NM_001017930	425739	-	AK097561|MAGEB6|158809|melanoma antigen family B, 6##BC067286|MAGEB6|158809|melanoma antigen family B, 6##NM_173523|MAGEB6|158809|melanoma antigen family B, 6##NM_173699|MAGEB18|286514|melanoma antigen family B, 18##BC029525|MAGEB18|286514|melanoma antigen family B, 18##AK057361|MAGEB18|286514|melanoma antigen family B, 18##NM_139058|ARX|170302|aristaless related homeobox##BC157859|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##NM_001136533|DCAF8L2|347442|DDB1 and CUL4 associated factor 8-like 2##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1	0.312726	CTCF.p2:-14:0.313
chrX	30361472	30361590	reg1041837.p1	3.478	+	HQ692832 AB464646 BC011564 NM_000475	-34045	-	NM_177404 BC013772	-96235	+	AK314977 NM_002363 NM_177415 X82539	-99684	+	TSC_hg19_v1_chrX_-_30595884 AK021639 BC020611 NM_025159	234426	-	TSC_hg19_v1_chrX_+_30671493 BC042421 BC071595 NM_000167 NM_001128127 NM_001205019 NM_203391	309963	+	TSC_hg19_v1_chrX_+_30671539 AK313215	310011	+	HQ692832|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##BC011564|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_000475|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_177404|MAGEB1|4112|melanoma antigen family B, 1##BC013772|MAGEB1|4112|melanoma antigen family B, 1##AK314977|MAGEB1|4112|melanoma antigen family B, 1##NM_002363|MAGEB1|4112|melanoma antigen family B, 1##NM_177415|MAGEB1|4112|melanoma antigen family B, 1##X82539|MAGEB1|4112|melanoma antigen family B, 1##AK021639|CXorf21|80231|chromosome X open reading frame 21##BC020611|CXorf21|80231|chromosome X open reading frame 21##NM_025159|CXorf21|80231|chromosome X open reading frame 21##BC042421|GK|2710|glycerol kinase##BC071595|GK|2710|glycerol kinase##NM_000167|GK|2710|glycerol kinase##NM_001128127|GK|2710|glycerol kinase##NM_001205019|GK|2710|glycerol kinase##NM_203391|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase	0.0	
chr10	13248686	13248769	reg1032511.p1	3.477	+	TSC_hg19_v1_chr10_+_13203578 NM_018518 NM_182751 AK292701 AK055695 BC101727 AB042719 AL136840 BC143490	-45159	+	TSC_hg19_v1_chr10_+_13142135 NM_001008211 NM_001008212 NM_001008213 NM_021980 AK316171 AK303715 BC013876 BC032762 AF061034 AF420371 AF420372 AF420373	-106582	+	AB528751 AM393288 AL136562 TSC_hg19_v1_chr10_-_13043714 BC051334 NM_031455	-205028	-	BC018068 NM_145314	27600	-	NM_001037537	93018	-	TSC_hg19_v1_chr10_-_13342061 CR542055 DQ891007 DQ894185	93322	-	NM_018518|MCM10|55388|minichromosome maintenance complex component 10##NM_182751|MCM10|55388|minichromosome maintenance complex component 10##AK292701|MCM10|55388|minichromosome maintenance complex component 10##AK055695|MCM10|55388|minichromosome maintenance complex component 10##BC101727|MCM10|55388|minichromosome maintenance complex component 10##AB042719|MCM10|55388|minichromosome maintenance complex component 10##AL136840|MCM10|55388|minichromosome maintenance complex component 10##BC143490|MCM10|55388|minichromosome maintenance complex component 10##NM_001008211|OPTN|10133|optineurin##NM_001008212|OPTN|10133|optineurin##NM_001008213|OPTN|10133|optineurin##NM_021980|OPTN|10133|optineurin##AK316171|OPTN|10133|optineurin##AK303715|OPTN|10133|optineurin##BC013876|OPTN|10133|optineurin##BC032762|OPTN|10133|optineurin##AF061034|OPTN|10133|optineurin##AF420371|OPTN|10133|optineurin##AF420372|OPTN|10133|optineurin##AF420373|OPTN|10133|optineurin##AM393288|CCDC3|83643|coiled-coil domain containing 3##AL136562|CCDC3|83643|coiled-coil domain containing 3##BC051334|CCDC3|83643|coiled-coil domain containing 3##NM_031455|CCDC3|83643|coiled-coil domain containing 3##BC018068|UCMA|221044|upper zone of growth plate and cartilage matrix associated##NM_145314|UCMA|221044|upper zone of growth plate and cartilage matrix associated##NM_001037537|PHYH|5264|phytanoyl-CoA 2-hydroxylase##CR542055|PHYH|5264|phytanoyl-CoA 2-hydroxylase##DQ891007|PHYH|5264|phytanoyl-CoA 2-hydroxylase##DQ894185|PHYH|5264|phytanoyl-CoA 2-hydroxylase	0.996992	CTCF.p2:18:0.997
chr10	93668615	93668755	reg1038356.p1	3.477	+	TSC_hg19_v1_chr10_-_93668642 AB464522 DQ503576	-9	-	TSC_hg19_v1_chr10_+_93558308 AF329696 AF264912 AF342982	-110321	+	AK314612 TSC_hg19_v1_chr10_+_93558182 AF309033	-110496	+	AK315427 BC025966 AK075410 NM_152429	535	-	TSC_hg19_v1_chr10_+_93683526 AK308399	14831	+	TSC_hg19_v1_chr10_+_93683569 AF038362 NM_003972 BC112201 AJ001017	15007	+	DQ503576|FGFBP3|143282|fibroblast growth factor binding protein 3##AF329696|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF264912|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF342982|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AK314612|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AF309033|TNKS2|80351|tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2##AK315427|FGFBP3|143282|fibroblast growth factor binding protein 3##BC025966|FGFBP3|143282|fibroblast growth factor binding protein 3##AK075410|FGFBP3|143282|fibroblast growth factor binding protein 3##NM_152429|FGFBP3|143282|fibroblast growth factor binding protein 3##AK308399|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AF038362|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##NM_003972|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##BC112201|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AJ001017|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)	0.016656	
chr11	88212290	88212393	reg1040297.p2	3.477	+	TSC_hg19_v1_chr11_-_88070905 BX537913 NM_001114173 NM_001814 NM_148170	-141410	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	-141439	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	-141474	-	AY608336 D28538 D28539 NM_001143831	568798	-	AK291362 NM_000842	584474	-	NM_000372 BC027179 M74314 Y00819 U01873 J03581	698739	+	BX537913|CTSC|1075|cathepsin C##NM_001114173|CTSC|1075|cathepsin C##NM_001814|CTSC|1075|cathepsin C##NM_148170|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AY608336|GRM5|2915|glutamate receptor, metabotropic 5##D28538|GRM5|2915|glutamate receptor, metabotropic 5##D28539|GRM5|2915|glutamate receptor, metabotropic 5##NM_001143831|GRM5|2915|glutamate receptor, metabotropic 5##AK291362|GRM5|2915|glutamate receptor, metabotropic 5##NM_000842|GRM5|2915|glutamate receptor, metabotropic 5##NM_000372|TYR|7299|tyrosinase (oculocutaneous albinism IA)##BC027179|TYR|7299|tyrosinase (oculocutaneous albinism IA)##M74314|TYR|7299|tyrosinase (oculocutaneous albinism IA)##Y00819|TYR|7299|tyrosinase (oculocutaneous albinism IA)##U01873|TYR|7299|tyrosinase (oculocutaneous albinism IA)##J03581|TYR|7299|tyrosinase (oculocutaneous albinism IA)	0.0	
chr14	100745383	100745450	reg1025207.p2	3.477	+	TSC_hg19_v1_chr14_+_100705474 BC037308 M76541 BC020324 BC065366 AB464361 DQ891638 EU176600 CU691478	-39910	+	TSC_hg19_v1_chr14_+_100705309 M77698	-40104	+	NM_003403 TSC_hg19_v1_chr14_+_100705177	-40274	+	TSC_hg19_v1_chr14_-_100772779 AK096294 AK123821 AK310069 BC142945 AK172788 BX247983 NM_001039355	27423	-	AK092001 AX747302 TSC_hg19_v1_chr14_+_100789675 AB073385 AY569438 AY570298 NM_207117 BX248260 BC137253 BC137254 BC144549	44270	+	X59892 TSC_hg19_v1_chr14_-_100841685 BC095453 M61715	96275	-	BC037308|YY1|7528|YY1 transcription factor##M76541|YY1|7528|YY1 transcription factor##BC020324|YY1|7528|YY1 transcription factor##BC065366|YY1|7528|YY1 transcription factor##DQ891638|YY1|7528|YY1 transcription factor##EU176600|YY1|7528|YY1 transcription factor##M77698|YY1|7528|YY1 transcription factor##NM_003403|YY1|7528|YY1 transcription factor##AK096294|SLC25A29|123096|solute carrier family 25, member 29##AK123821|SLC25A29|123096|solute carrier family 25, member 29##AK310069|SLC25A29|123096|solute carrier family 25, member 29##AK172788|SLC25A29|123096|solute carrier family 25, member 29##BX247983|SLC25A29|123096|solute carrier family 25, member 29##NM_001039355|SLC25A29|123096|solute carrier family 25, member 29##AK092001|SLC25A47|283600|solute carrier family 25, member 47##AB073385|SLC25A47|283600|solute carrier family 25, member 47##AY569438|SLC25A47|283600|solute carrier family 25, member 47##AY570298|SLC25A47|283600|solute carrier family 25, member 47##NM_207117|SLC25A47|283600|solute carrier family 25, member 47##BX248260|SLC25A47|283600|solute carrier family 25, member 47##BC137253|SLC25A47|283600|solute carrier family 25, member 47##BC137254|SLC25A47|283600|solute carrier family 25, member 47##BC144549|SLC25A47|283600|solute carrier family 25, member 47##X59892|WARS|7453|tryptophanyl-tRNA synthetase##BC095453|WARS|7453|tryptophanyl-tRNA synthetase##M61715|WARS|7453|tryptophanyl-tRNA synthetase	0.0	
chr14	104910567	104910690	reg1033663.p1	3.477	+	TSC_hg19_v1_chr14_+_104605441 AB033062	-305176	+	NM_015656	-305569	+	AX781433 BX247999 NM_001080464 AX721044 BC035836 BC136637 AX781428 AX781429 AX781430 AX781431 AX781435	-358567	+	AK095913 NM_001008404 AK297818 AK309489 BC041103	135458	+	AB464314 AK124477 NM_207379	160460	-	TSC_hg19_v1_chr14_+_105147469 BC035345	236834	+	AB033062|KIF26A|26153|kinesin family member 26A##NM_015656|KIF26A|26153|kinesin family member 26A##AX781433|ASPG|374569|asparaginase homolog (S. cerevisiae)##BX247999|ASPG|374569|asparaginase homolog (S. cerevisiae)##NM_001080464|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC035836|ASPG|374569|asparaginase homolog (S. cerevisiae)##BC136637|ASPG|374569|asparaginase homolog (S. cerevisiae)##AX781435|ASPG|374569|asparaginase homolog (S. cerevisiae)##AK095913|C14orf180|400258|chromosome 14 open reading frame 180##NM_001008404|C14orf180|400258|chromosome 14 open reading frame 180##AK297818|C14orf180|400258|chromosome 14 open reading frame 180##AK309489|C14orf180|400258|chromosome 14 open reading frame 180##BC041103|C14orf180|400258|chromosome 14 open reading frame 180##AK124477|TMEM179|388021|transmembrane protein 179##NM_207379|TMEM179|388021|transmembrane protein 179	0.0	
chr15	65222532	65222608	reg1035798.p1	3.477	+	TSC_hg19_v1_chr15_+_65204100 AK098736 NM_182703 AK075298 BC110610 AK307698	-18481	+	AK311036 NM_001195059 NM_025201 TSC_hg19_v1_chr15_+_65134113 AK096203 BC008744 AF494534	-88463	+	BC137503 BC137504 TSC_hg19_v1_chr15_-_65117814 BC018978 AK026345 EU084033 NM_025049 AB185926 AB185927	-104735	-	TSC_hg19_v1_chr15_-_65281780 AF212231 NM_001127889	59239	-	TSC_hg19_v1_chr15_-_65282170 AK172849 AK225527 AK312943 BC000244	59564	-	TSC_hg19_v1_chr15_-_65282253 AK301362 NM_001127890 NM_016630	59676	-	AK098736|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##NM_182703|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK075298|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##BC110610|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK307698|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##NM_001195059|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##NM_025201|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK096203|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC008744|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AF494534|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC137503|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC137504|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC018978|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AK026345|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##EU084033|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_025049|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185926|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185927|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AF212231|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_001127889|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK172849|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK225527|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK312943|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##BC000244|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##AK301362|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_001127890|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)##NM_016630|SPG21|51324|spastic paraplegia 21 (autosomal recessive, Mast syndrome)	0.0	
chr2	113238276	113238342	reg1007436.p1	3.477	+	NM_005054 U64675 NM_001164463	-47146	-	TSC_hg19_v1_chr2_+_113033193 AK131416	-205107	+	TSC_hg19_v1_chr2_+_113033173 NM_198581	-205148	+	TSC_hg19_v1_chr2_+_113239732 BC036819	1417	+	TSC_hg19_v1_chr2_+_113239762 NM_153712	1457	+	TSC_hg19_v1_chr2_+_113239813 AB071393 CU691434 DQ894075	1563	+	NM_005054|RGPD5|84220|RANBP2-like and GRIP domain containing 5##U64675|RGPD5|84220|RANBP2-like and GRIP domain containing 5##NM_001164463|RGPD8|727851|RANBP2-like and GRIP domain containing 8##AK131416|ZC3H6|376940|zinc finger CCCH-type containing 6##NM_198581|ZC3H6|376940|zinc finger CCCH-type containing 6##BC036819|TTL|150465|tubulin tyrosine ligase##NM_153712|TTL|150465|tubulin tyrosine ligase##AB071393|TTL|150465|tubulin tyrosine ligase##DQ894075|TTL|150465|tubulin tyrosine ligase	0.0	
chr2	20408443	20408510	reg1035284.p1	3.477	+	NM_014713	-156688	-	TSC_hg19_v1_chr2_-_20251415 AY359028 D14696 BC003158 AK129875	-157049	-	CR456758 TSC_hg19_v1_chr2_-_20251382 BC000421 AK304433 BC093075	-157138	-	X60306 AB464260 CU679093 DQ893265 DQ896595 TSC_hg19_v1_chr2_-_20424892 AK299385 J05392 AK313974 AK222739 BC008765 AJ551176 AK311409 NM_002997	16311	-	TSC_hg19_v1_chr2_-_20425168 NM_001006946	16703	-	AF272350 TSC_hg19_v1_chr2_-_20512079	103573	-	NM_014713|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AY359028|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##D14696|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC003158|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK129875|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##CR456758|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC000421|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK304433|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC093075|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##X60306|SDC1|6382|syndecan 1##DQ893265|SDC1|6382|syndecan 1##DQ896595|SDC1|6382|syndecan 1##AK299385|SDC1|6382|syndecan 1##J05392|SDC1|6382|syndecan 1##AK313974|SDC1|6382|syndecan 1##AK222739|SDC1|6382|syndecan 1##BC008765|SDC1|6382|syndecan 1##AJ551176|SDC1|6382|syndecan 1##NM_002997|SDC1|6382|syndecan 1##NM_001006946|SDC1|6382|syndecan 1##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)	0.0	
chr5	141704471	141704628	reg1029934.p2	3.477	+	BC125095 BC125096 TSC_hg19_v1_chr5_-_141704555 AF227516 AF227517	-29	-	TSC_hg19_v1_chr5_+_141488389 AB097010 AB097037 BC004317	-216139	+	AK075524 TSC_hg19_v1_chr5_+_141488384	-216165	+	TSC_hg19_v1_chr5_-_141704587 AK096464 NM_001127496 NM_030964	85	-	S67291 S67292 S67294 AB528663 X65778 X65779 M13361 NM_033137 X51943	289159	-	L01487 BC032697 NM_001144892	296353	-	BC125095|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125096|SPRY4|81848|sprouty homolog 4 (Drosophila)##AF227516|SPRY4|81848|sprouty homolog 4 (Drosophila)##AB097010|NDFIP1|80762|Nedd4 family interacting protein 1##AB097037|NDFIP1|80762|Nedd4 family interacting protein 1##BC004317|NDFIP1|80762|Nedd4 family interacting protein 1##AK075524|NDFIP1|80762|Nedd4 family interacting protein 1##AK096464|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_001127496|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_030964|SPRY4|81848|sprouty homolog 4 (Drosophila)##S67291|FGF1|2246|fibroblast growth factor 1 (acidic)##S67292|FGF1|2246|fibroblast growth factor 1 (acidic)##S67294|FGF1|2246|fibroblast growth factor 1 (acidic)##X65778|FGF1|2246|fibroblast growth factor 1 (acidic)##X65779|FGF1|2246|fibroblast growth factor 1 (acidic)##M13361|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)##X51943|FGF1|2246|fibroblast growth factor 1 (acidic)##L01487|FGF1|2246|fibroblast growth factor 1 (acidic)##BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)	0.0	
chr7	25005786	25005872	reg1026401.p2	3.477	+	TSC_hg19_v1_chr7_-_24797557 NM_001127454 NM_004403	-208232	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	-208490	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	-208762	-	AF323727 AY008372 TSC_hg19_v1_chr7_-_25019775 AF392444 BC017731 NM_015550 NM_145320 NM_145321 NM_145322 AB014604	13915	-	AL713681 BC005299 BC008475 BC008477 BC009578 BC009579 BC009582 BC009587 BC009602 BC014359 BC014361 BC015130 BC016006 BC021994 BC022330 BC067222 BC068464 BC070156 BC071761 TSC_hg19_v1_chr7_-_25164884 BC070346 BC009607	159048	-	TSC_hg19_v1_chr7_-_25164943 AK311836 BC024216 NM_018947	159111	-	NM_001127454|DFNA5|1687|deafness, autosomal dominant 5##NM_004403|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##AF323727|OSBPL3|26031|oxysterol binding protein-like 3##AY008372|OSBPL3|26031|oxysterol binding protein-like 3##AF392444|OSBPL3|26031|oxysterol binding protein-like 3##BC017731|OSBPL3|26031|oxysterol binding protein-like 3##NM_015550|OSBPL3|26031|oxysterol binding protein-like 3##NM_145320|OSBPL3|26031|oxysterol binding protein-like 3##NM_145321|OSBPL3|26031|oxysterol binding protein-like 3##NM_145322|OSBPL3|26031|oxysterol binding protein-like 3##AB014604|OSBPL3|26031|oxysterol binding protein-like 3##AL713681|CYCS|54205|cytochrome c, somatic##BC005299|CYCS|54205|cytochrome c, somatic##BC008475|CYCS|54205|cytochrome c, somatic##BC008477|CYCS|54205|cytochrome c, somatic##BC009578|CYCS|54205|cytochrome c, somatic##BC009579|CYCS|54205|cytochrome c, somatic##BC009582|CYCS|54205|cytochrome c, somatic##BC009587|CYCS|54205|cytochrome c, somatic##BC009602|CYCS|54205|cytochrome c, somatic##BC014359|CYCS|54205|cytochrome c, somatic##BC014361|CYCS|54205|cytochrome c, somatic##BC015130|CYCS|54205|cytochrome c, somatic##BC016006|CYCS|54205|cytochrome c, somatic##BC021994|CYCS|54205|cytochrome c, somatic##BC022330|CYCS|54205|cytochrome c, somatic##BC067222|CYCS|54205|cytochrome c, somatic##BC068464|CYCS|54205|cytochrome c, somatic##BC070156|CYCS|54205|cytochrome c, somatic##BC071761|CYCS|54205|cytochrome c, somatic##BC070346|CYCS|54205|cytochrome c, somatic##BC009607|CYCS|54205|cytochrome c, somatic##AK311836|CYCS|54205|cytochrome c, somatic##BC024216|CYCS|54205|cytochrome c, somatic##NM_018947|CYCS|54205|cytochrome c, somatic	0.0	
chr9	37800666	37800785	reg1036485.p1	3.477	+	AF281132 NM_016042 TSC_hg19_v1_chr9_-_37785068 NM_001002269	-15656	-	BC002437 TSC_hg19_v1_chr9_-_37785062 AK290864 AK289571	-15668	-	AF151860 CU679169 DQ891938 DQ895125 BC008880 TSC_hg19_v1_chr9_-_37785045 AB528623	-15696	-	TSC_hg19_v1_chr9_+_37800784 NM_024345	59	+	TSC_hg19_v1_chr9_+_37800815 BC108686	83	+	AK091407 AX746962 TSC_hg19_v1_chr9_-_37904125 BC008500 BC063563	103404	-	AF281132|EXOSC3|51010|exosome component 3##NM_016042|EXOSC3|51010|exosome component 3##NM_001002269|EXOSC3|51010|exosome component 3##BC002437|EXOSC3|51010|exosome component 3##AK290864|EXOSC3|51010|exosome component 3##AK289571|EXOSC3|51010|exosome component 3##AF151860|EXOSC3|51010|exosome component 3##DQ891938|EXOSC3|51010|exosome component 3##DQ895125|EXOSC3|51010|exosome component 3##BC008880|EXOSC3|51010|exosome component 3##NM_024345|DCAF10|79269|DDB1 and CUL4 associated factor 10##BC108686|DCAF10|79269|DDB1 and CUL4 associated factor 10##AK091407|MCART1|92014|mitochondrial carrier triple repeat 1##BC008500|MCART1|92014|mitochondrial carrier triple repeat 1##BC063563|MCART1|92014|mitochondrial carrier triple repeat 1	0.0	
chr12	53346410	53346512	reg1020181.p2	3.476	+	AK290938 AK315826 TSC_hg19_v1_chr12_-_53343647	-2832	-	AK313988 TSC_hg19_v1_chr12_+_53342904 AK223093 AK129587 BC020982 X12881 BC072017 BC000698 BC000180 BC073757 BC008636 BC004253 AY762101 AB528484 DQ890555 DQ893715 BT019412 X12883	-3524	+	NM_000224 TSC_hg19_v1_chr12_+_53342874	-3600	+	NM_001417 TSC_hg19_v1_chr12_+_53400220	53681	+	TSC_hg19_v1_chr12_+_53400239 AK222528 AK293731 AK299329 AK310244 AK299510 AK299526	53777	+	TSC_hg19_v1_chr12_+_53400249 BC073139 BC073154 BC098437 BC007745 CR627377	53796	+	AK290938|KRT8|3856|keratin 8##AK315826|KRT8|3856|keratin 8##AK313988|KRT18|3875|keratin 18##AK223093|KRT18|3875|keratin 18##AK129587|KRT18|3875|keratin 18##BC020982|KRT18|3875|keratin 18##X12881|KRT18|3875|keratin 18##BC072017|KRT18|3875|keratin 18##BC000698|KRT18|3875|keratin 18##BC000180|KRT18|3875|keratin 18##BC008636|KRT18|3875|keratin 18##BC004253|KRT18|3875|keratin 18##AY762101|KRT18|3875|keratin 18##DQ890555|KRT18|3875|keratin 18##DQ893715|KRT18|3875|keratin 18##BT019412|KRT18|3875|keratin 18##X12883|KRT18|3875|keratin 18##NM_000224|KRT18|3875|keratin 18##NM_001417|EIF4B|1975|eukaryotic translation initiation factor 4B##AK222528|EIF4B|1975|eukaryotic translation initiation factor 4B##AK293731|EIF4B|1975|eukaryotic translation initiation factor 4B##AK299329|EIF4B|1975|eukaryotic translation initiation factor 4B##AK310244|EIF4B|1975|eukaryotic translation initiation factor 4B##AK299510|EIF4B|1975|eukaryotic translation initiation factor 4B##AK299526|EIF4B|1975|eukaryotic translation initiation factor 4B##BC073139|EIF4B|1975|eukaryotic translation initiation factor 4B##BC073154|EIF4B|1975|eukaryotic translation initiation factor 4B##BC098437|EIF4B|1975|eukaryotic translation initiation factor 4B##BC007745|EIF4B|1975|eukaryotic translation initiation factor 4B##CR627377|EIF4B|1975|eukaryotic translation initiation factor 4B	0.054649	
chr16	27442175	27442307	reg1038607.p1	3.476	+	NM_021798 AY358826 AF254067	-3637	+	AK292663 NM_181078 NM_181079 AK312825	-28754	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-100897	+	TSC_hg19_v1_chr16_-_27561218 BX648143	118977	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	118990	-	TSC_hg19_v1_chr16_-_27561248 NM_001520 U02619	119028	-	NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##NM_001520|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##U02619|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.0	
chr17	70000864	70000978	reg1035580.p1	3.476	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-1835225	+	BC033038 NM_170742	-1899927	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-1929491	+	TSC_hg19_v1_chr17_-_70116937 AL833139	116017	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	116238	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	116249	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.0	
chr2	137142104	137142284	reg1008040.p1	3.476	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-266518	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-268396	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-398978	-	TSC_hg19_v1_chr2_+_137523114 AK299929	380922	+	NM_001080427	606267	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1579740	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.0	
chr3	189684794	189684885	reg1005120.p1	3.476	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	-177321	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-335580	+	AK125682 NM_198485 BC101550 BC101552	-795028	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	153856	-	NM_018192	154068	-	NM_001134418	155386	-	AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##NM_001134418|LEPREL1|55214|leprecan-like 1	0.0	
chr3	31406303	31406484	reg1036423.p1	3.476	+	AL832766 NM_207359	-470241	-	AB384947 TSC_hg19_v1_chr3_+_30648380 D28131	-757990	+	TSC_hg19_v1_chr3_+_30648121 BC040499 NM_001024847 NM_003242 M85079 AK314102 AK300383	-758371	+	TSC_hg19_v1_chr3_+_31574119 AK311488	167737	+	TSC_hg19_v1_chr3_+_31574468 AK074587	168056	+	TSC_hg19_v1_chr3_+_31574485 AX799082 AY074880 NM_178862	168089	+	AL832766|GADL1|339896|glutamate decarboxylase-like 1##NM_207359|GADL1|339896|glutamate decarboxylase-like 1##D28131|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##BC040499|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_001024847|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##NM_003242|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##M85079|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK314102|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK300383|TGFBR2|7048|transforming growth factor, beta receptor II (70/80kDa)##AK311488|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AK074587|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AX799082|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##AY074880|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)##NM_178862|STT3B|201595|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)	0.0	
chr3	42049408	42049570	reg1032583.p1	3.476	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	-45930	-	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	-808465	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	-808540	+	AK295480 AB028965 NM_001042646 AK295848 AK316260 AB385421	83344	+	TSC_hg19_v1_chr3_+_42190749 AK294221	141259	+	AL713787 TSC_hg19_v1_chr3_+_42190865	141358	+	BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK295480|TRAK1|22906|trafficking protein, kinesin binding 1##AB028965|TRAK1|22906|trafficking protein, kinesin binding 1##NM_001042646|TRAK1|22906|trafficking protein, kinesin binding 1##AK295848|TRAK1|22906|trafficking protein, kinesin binding 1##AK316260|TRAK1|22906|trafficking protein, kinesin binding 1##AK294221|TRAK1|22906|trafficking protein, kinesin binding 1##AL713787|TRAK1|22906|trafficking protein, kinesin binding 1	0.0	
chr3	62819312	62819430	reg1034480.p1	3.476	+	AK290464 NM_018008	-460182	-	BC017772 NM_020685	-513976	+	TSC_hg19_v1_chr3_+_62304696 AF236158 AK313915 AK310431	-514665	+	TSC_hg19_v1_chr3_-_62860565 AB587314	41261	-	AF458662 AB593079 TSC_hg19_v1_chr3_-_62861056 AB032947 NM_003716 NM_183393 NM_183394	41673	-	BX647736 NM_001130003 TSC_hg19_v1_chr3_+_63263993 AK309017 CR936762 AK293628	444546	+	AK290464|FEZF2|55079|FEZ family zinc finger 2##NM_018008|FEZF2|55079|FEZ family zinc finger 2##BC017772|C3orf14|57415|chromosome 3 open reading frame 14##NM_020685|C3orf14|57415|chromosome 3 open reading frame 14##AF236158|C3orf14|57415|chromosome 3 open reading frame 14##AK313915|C3orf14|57415|chromosome 3 open reading frame 14##AK310431|C3orf14|57415|chromosome 3 open reading frame 14##AF458662|CADPS|8618|Ca++-dependent secretion activator##AB593079|CADPS|8618|Ca++-dependent secretion activator##AB032947|CADPS|8618|Ca++-dependent secretion activator##NM_003716|CADPS|8618|Ca++-dependent secretion activator##NM_183393|CADPS|8618|Ca++-dependent secretion activator##NM_183394|CADPS|8618|Ca++-dependent secretion activator##NM_001130003|SYNPR|132204|synaptoporin##AK309017|SYNPR|132204|synaptoporin##CR936762|SYNPR|132204|synaptoporin##AK293628|SYNPR|132204|synaptoporin	0.05175	
chr6	134444845	134444954	reg1032638.p1	3.476	+	CU687054 AK226098 BC070149 AY046419 AL833602 AK122628 BX648889 NM_145176	-71196	-	TSC_hg19_v1_chr6_+_134274364 NM_004865 AK313645 BC000381 AF136570 AF130312 AB020881 BC017559	-170554	+	NM_001253676 AK292320 TSC_hg19_v1_chr6_+_134273421	-171535	+	CU674630 Y10032 AF153609 BC001263 FM205710 TSC_hg19_v1_chr6_-_134496003 AK098509 AK295422 BX649005	51075	-	TSC_hg19_v1_chr6_-_134496010 NM_005627	51120	-	FM205707 TSC_hg19_v1_chr6_-_134496850	51962	-	AK226098|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BC070149|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AY046419|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AL833602|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##AK122628|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##BX648889|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_145176|SLC2A12|154091|solute carrier family 2 (facilitated glucose transporter), member 12##NM_004865|TBPL1|9519|TBP-like 1##AK313645|TBPL1|9519|TBP-like 1##BC000381|TBPL1|9519|TBP-like 1##AF136570|TBPL1|9519|TBP-like 1##AF130312|TBPL1|9519|TBP-like 1##AB020881|TBPL1|9519|TBP-like 1##BC017559|TBPL1|9519|TBP-like 1##NM_001253676|TBPL1|9519|TBP-like 1##AK292320|TBPL1|9519|TBP-like 1##Y10032|SGK1|6446|serum/glucocorticoid regulated kinase 1##AF153609|SGK1|6446|serum/glucocorticoid regulated kinase 1##BC001263|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205710|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK098509|SGK1|6446|serum/glucocorticoid regulated kinase 1##AK295422|SGK1|6446|serum/glucocorticoid regulated kinase 1##BX649005|SGK1|6446|serum/glucocorticoid regulated kinase 1##NM_005627|SGK1|6446|serum/glucocorticoid regulated kinase 1##FM205707|SGK1|6446|serum/glucocorticoid regulated kinase 1	0.96762	CTCF.p2:15:0.968
chr9	118763116	118763229	reg1036097.p1	3.476	+	AB022761 NM_017418	-859076	+	AB210038 TSC_hg19_v1_chr9_-_117880433 AK304015 X78565 NM_002160	-882699	-	AK313619 NM_001244 NM_001252290	-1070298	-	TSC_hg19_v1_chr9_+_118916069 BC054010 BC057782 NM_002581 BC029404	152898	+	BC101667 BC093835 BC143289 BC143292 BC143293 TSC_hg19_v1_chr9_-_119449510 BC029272 NM_198186 BC010680 AK024064 NM_001184734 NM_001184735 NM_198187 NM_198188	686290	-	TSC_hg19_v1_chr9_+_119449616 NM_001099679 NM_012210 AK314264 AX775779 BC003154 U18543	686434	+	AB022761|DEC1|50514|deleted in esophageal cancer 1##NM_017418|DEC1|50514|deleted in esophageal cancer 1##AB210038|TNC|3371|tenascin C##AK304015|TNC|3371|tenascin C##X78565|TNC|3371|tenascin C##NM_002160|TNC|3371|tenascin C##AK313619|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001244|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_001252290|TNFSF8|944|tumor necrosis factor (ligand) superfamily, member 8##NM_002581|PAPPA|5069|pregnancy-associated plasma protein A, pappalysin 1##BC101667|ASTN2|23245|astrotactin 2##BC093835|ASTN2|23245|astrotactin 2##BC143289|ASTN2|23245|astrotactin 2##BC143292|ASTN2|23245|astrotactin 2##BC143293|ASTN2|23245|astrotactin 2##BC029272|ASTN2|23245|astrotactin 2##NM_198186|ASTN2|23245|astrotactin 2##BC010680|ASTN2|23245|astrotactin 2##AK024064|ASTN2|23245|astrotactin 2##NM_001184734|ASTN2|23245|astrotactin 2##NM_001184735|ASTN2|23245|astrotactin 2##NM_198187|ASTN2|23245|astrotactin 2##NM_198188|ASTN2|23245|astrotactin 2##NM_001099679|TRIM32|22954|tripartite motif containing 32##NM_012210|TRIM32|22954|tripartite motif containing 32##AK314264|TRIM32|22954|tripartite motif containing 32##AX775779|TRIM32|22954|tripartite motif containing 32##BC003154|TRIM32|22954|tripartite motif containing 32##U18543|TRIM32|22954|tripartite motif containing 32	0.068922	
chrY	1560778	1560885	reg1039095.p1	3.476	+	AK301844 NM_001173473	-38180	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-39030	-	CR457400 DQ891478 DQ894667 BC031912 BC007295 BC008737 BC008935 AY007135 BC007850 BC013256 BC035469 AB209822 BC014775 AK312336 NM_001636	-99862	-	BC043610 GQ280263 NM_178129 AK126147	45207	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	99698	+	NM_004043 U11090	103516	+	AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##CR457400|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ891478|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##DQ894667|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC031912|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007295|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008737|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC008935|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AY007135|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC007850|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC013256|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC035469|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AB209822|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC014775|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##AK312336|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##NM_001636|SLC25A6|293|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6##BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase	0.07611	
chr10	97666819	97666937	reg1032824.p1	3.475	+	NM_001164178 NM_001164181 AK301459 AK298648 AK098278 NM_001164179 NM_001164182 NM_001164183 NM_001776	-151338	+	AJ133133 AJ133134 NM_001098175	-195343	+	BC068449 DQ278872 NM_001143973 NM_015631	-212979	-	AK294399 NM_001130446	843	+	NM_001001732 NM_001159747 AK302377 BC075861	92986	+	TSC_hg19_v1_chr10_+_97803318 BC043175 NM_001134375 NM_001134376 NM_019084 AK092360 AK297264 AX747499	136503	+	NM_001164178|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164181|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK301459|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK298648|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AK098278|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164179|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164182|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001164183|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001776|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133133|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##AJ133134|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##NM_001098175|ENTPD1|953|ectonucleoside triphosphate diphosphohydrolase 1##BC068449|TCTN3|26123|tectonic family member 3##DQ278872|TCTN3|26123|tectonic family member 3##NM_001143973|TCTN3|26123|tectonic family member 3##NM_015631|TCTN3|26123|tectonic family member 3##AK294399|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001130446|C10orf131|100127889|chromosome 10 open reading frame 131##NM_001001732|CC2D2B|387707|coiled-coil and C2 domain containing 2B##NM_001159747|CC2D2B|387707|coiled-coil and C2 domain containing 2B##AK302377|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC075861|CC2D2B|387707|coiled-coil and C2 domain containing 2B##BC043175|CCNJ|54619|cyclin J##NM_001134375|CCNJ|54619|cyclin J##NM_001134376|CCNJ|54619|cyclin J##NM_019084|CCNJ|54619|cyclin J##AK092360|CCNJ|54619|cyclin J##AK297264|CCNJ|54619|cyclin J	0.0	
chr11	101733309	101733396	reg1043124.p1	3.475	+	AJ006276 NM_004621	-278694	-	AK304853 TSC_hg19_v1_chr11_-_101000531 NM_000926	-732849	-	NM_001202474 AY382152 AB084248 AB085683 AB085843 AB085844 AB085845 AB587507	-733553	-	TSC_hg19_v1_chr11_+_101785752 NM_020802 AK057230 BC036525 BC146807	52435	+	TSC_hg19_v1_chr11_+_101785949 AK309479 BX647415	52640	+	BC049170 BC053957 NM_178127	53900	-	AJ006276|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6##NM_004621|TRPC6|7225|transient receptor potential cation channel, subfamily C, member 6##AK304853|PGR|5241|progesterone receptor##NM_000926|PGR|5241|progesterone receptor##NM_001202474|PGR|5241|progesterone receptor##AY382152|PGR|5241|progesterone receptor##AB084248|PGR|5241|progesterone receptor##AB085683|PGR|5241|progesterone receptor##AB085843|PGR|5241|progesterone receptor##AB085844|PGR|5241|progesterone receptor##AB085845|PGR|5241|progesterone receptor##NM_020802|KIAA1377|57562|KIAA1377##AK057230|KIAA1377|57562|KIAA1377##BC036525|KIAA1377|57562|KIAA1377##BC146807|KIAA1377|57562|KIAA1377##BX647415|KIAA1377|57562|KIAA1377##BC049170|ANGPTL5|253935|angiopoietin-like 5##BC053957|ANGPTL5|253935|angiopoietin-like 5##NM_178127|ANGPTL5|253935|angiopoietin-like 5	0.195388	
chr1	227914734	227914826	reg1039960.p1	3.475	+	AK311313 TSC_hg19_v1_chr1_+_227751265	-163499	+	TSC_hg19_v1_chr1_+_227751254 NM_178549 AK026475 AK307248 BC042500	-163542	+	TSC_hg19_v1_chr1_-_227506194 NM_003607 NM_014826 U59305	-408730	-	AK055266 AK093736 BC032775 TSC_hg19_v1_chr1_+_227916386	1537	+	AY090635 NM_053052	7916	+	TSC_hg19_v1_chr1_-_227922985 BC011928	8191	-	AK311313|ZNF678|339500|zinc finger protein 678##NM_178549|ZNF678|339500|zinc finger protein 678##AK026475|ZNF678|339500|zinc finger protein 678##AK307248|ZNF678|339500|zinc finger protein 678##BC042500|ZNF678|339500|zinc finger protein 678##NM_003607|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##NM_014826|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##U59305|CDC42BPA|8476|CDC42 binding protein kinase alpha (DMPK-like)##AK055266|LOC100130093|100130093|uncharacterized LOC100130093##AK093736|LOC100130093|100130093|uncharacterized LOC100130093##AY090635|SNAP47|116841|synaptosomal-associated protein, 47kDa##NM_053052|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC011928|JMJD4|65094|jumonji domain containing 4	0.0	
chr13	51186909	51187043	reg1035745.p1	3.475	+	AJ412041 AJ412042 AJ412043 TSC_hg19_v1_chr13_+_50760088	-426923	+	TSC_hg19_v1_chr13_-_50699781 AF380424	-487161	-	AJ412023 AJ412024 AJ412025 AJ412026 AJ412038 AJ412039 AJ412054 AJ412055 AJ412056 AJ412057 AJ412058 AJ412059 AJ412060 AJ412061 AJ412062 Y15227 TSC_hg19_v1_chr13_+_50656364 BC004131 AK312167 BC020692 AK095311	-530631	+	AY357595 BC104892 BC112009 NM_198989 AK303567 AK126830	230976	-	NM_001142279 NM_024570 TSC_hg19_v1_chr13_+_51483898	296880	+	TSC_hg19_v1_chr13_+_51483905 AY764036	296928	+	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AJ412023|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412024|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412061|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412062|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##Y15227|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC020692|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AK095311|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7##AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_001142279|RNASEH2B|79621|ribonuclease H2, subunit B##NM_024570|RNASEH2B|79621|ribonuclease H2, subunit B##AY764036|RNASEH2B|79621|ribonuclease H2, subunit B	0.602619	CTCF.p2:74:0.603
chr15	78405392	78405573	reg1001547.p1	3.475	+	NM_001101404	-20556	+	TSC_hg19_v1_chr15_-_78370032 AB028978 BC152465 NM_015079 NM_144572	-35529	-	TSC_hg19_v1_chr15_-_77924732 AK291363	-480702	-	BT019962 CU690402 AB528675 AB012955 TSC_hg19_v1_chr15_-_78423867 AK293167 BC047381 BC057292 BC033108 NM_006383	18280	-	TSC_hg19_v1_chr15_+_78441718 AK299970 AK096721 AK296002 BC036227 NM_005530 AK315963 CR749548 BC021967 AK316051	36223	+	TSC_hg19_v1_chr15_+_78441734 AK222973	36252	+	NM_001101404|SH2D7|646892|SH2 domain containing 7##AB028978|TBC1D2B|23102|TBC1 domain family, member 2B##BC152465|TBC1D2B|23102|TBC1 domain family, member 2B##NM_015079|TBC1D2B|23102|TBC1 domain family, member 2B##NM_144572|TBC1D2B|23102|TBC1 domain family, member 2B##AK291363|LINGO1|84894|leucine rich repeat and Ig domain containing 1##BT019962|CIB2|10518|calcium and integrin binding family member 2##AB012955|CIB2|10518|calcium and integrin binding family member 2##AK293167|CIB2|10518|calcium and integrin binding family member 2##BC047381|CIB2|10518|calcium and integrin binding family member 2##BC057292|CIB2|10518|calcium and integrin binding family member 2##BC033108|CIB2|10518|calcium and integrin binding family member 2##NM_006383|CIB2|10518|calcium and integrin binding family member 2##AK299970|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK296002|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC036227|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##NM_005530|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK315963|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##CR749548|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##BC021967|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK316051|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha##AK222973|IDH3A|3419|isocitrate dehydrogenase 3 (NAD+) alpha	0.0	
chr16	3860365	3860501	reg1039417.p1	3.475	+	TSC_hg19_v1_chr16_-_3843474 AK304771	-16907	-	TSC_hg19_v1_chr16_-_3767521 U12595 BC001455 AF043254 AB528744 CU676340 DQ893476 DQ896346 BC000406 BC002994 AF154108 AK299127 BC018950 AK223049 AK223076 AK223205 BC023585 AK093344 NM_016292	-92898	-	NM_005223	-157494	+	AB210043 NM_001079846 NM_004380	69687	-	TSC_hg19_v1_chr16_-_3930711 U47741	70265	-	TSC_hg19_v1_chr16_-_3930715 U85962	70284	-	AK304771|CREBBP|1387|CREB binding protein##U12595|TRAP1|10131|TNF receptor-associated protein 1##BC001455|TRAP1|10131|TNF receptor-associated protein 1##AF043254|TRAP1|10131|TNF receptor-associated protein 1##DQ893476|TRAP1|10131|TNF receptor-associated protein 1##DQ896346|TRAP1|10131|TNF receptor-associated protein 1##BC000406|TRAP1|10131|TNF receptor-associated protein 1##BC002994|TRAP1|10131|TNF receptor-associated protein 1##AF154108|TRAP1|10131|TNF receptor-associated protein 1##AK299127|TRAP1|10131|TNF receptor-associated protein 1##BC018950|TRAP1|10131|TNF receptor-associated protein 1##AK223049|TRAP1|10131|TNF receptor-associated protein 1##AK223076|TRAP1|10131|TNF receptor-associated protein 1##AK223205|TRAP1|10131|TNF receptor-associated protein 1##BC023585|TRAP1|10131|TNF receptor-associated protein 1##AK093344|TRAP1|10131|TNF receptor-associated protein 1##NM_016292|TRAP1|10131|TNF receptor-associated protein 1##NM_005223|DNASE1|1773|deoxyribonuclease I##AB210043|CREBBP|1387|CREB binding protein##NM_001079846|CREBBP|1387|CREB binding protein##NM_004380|CREBBP|1387|CREB binding protein##U47741|CREBBP|1387|CREB binding protein##U85962|CREBBP|1387|CREB binding protein	0.0	
chr17	38713699	38713874	reg1034301.p2	3.475	+	AF417488 AF370421 NM_032865 TSC_hg19_v1_chr17_-_38657876	-55940	-	TSC_hg19_v1_chr17_+_38599701 NM_001552 AK290810 AK304572 BC016041 M62403 M38177 AB463781 BT019891 BT019892	-113967	+	AF285157 AF285158 AF285159 AB587539 J04088 BC140791 TSC_hg19_v1_chr17_-_38574134 BC013429 NM_001067	-139662	-	BC035343 L08176 AK312732 AK127810 L31581 NM_001838	7932	-	AK294218 TSC_hg19_v1_chr17_-_38804093 BC047731 BC063700 AK095047 EU327017 EU327018 EU327019 EU327020 AK294666 AK001532 BC007082 BC011017 NM_003079	90284	-	BC069196 TSC_hg19_v1_chr17_-_38804818	91010	-	AF417488|TNS4|84951|tensin 4##AF370421|TNS4|84951|tensin 4##NM_032865|TNS4|84951|tensin 4##NM_001552|IGFBP4|3487|insulin-like growth factor binding protein 4##AK290810|IGFBP4|3487|insulin-like growth factor binding protein 4##AK304572|IGFBP4|3487|insulin-like growth factor binding protein 4##BC016041|IGFBP4|3487|insulin-like growth factor binding protein 4##M62403|IGFBP4|3487|insulin-like growth factor binding protein 4##M38177|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019891|IGFBP4|3487|insulin-like growth factor binding protein 4##BT019892|IGFBP4|3487|insulin-like growth factor binding protein 4##AF285157|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285158|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##AF285159|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##J04088|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC140791|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC013429|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##NM_001067|TOP2A|7153|topoisomerase (DNA) II alpha 170kDa##BC035343|CCR7|1236|chemokine (C-C motif) receptor 7##L08176|CCR7|1236|chemokine (C-C motif) receptor 7##AK312732|CCR7|1236|chemokine (C-C motif) receptor 7##AK127810|CCR7|1236|chemokine (C-C motif) receptor 7##L31581|CCR7|1236|chemokine (C-C motif) receptor 7##NM_001838|CCR7|1236|chemokine (C-C motif) receptor 7##AK294218|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC047731|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC063700|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK095047|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327018|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327019|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##EU327020|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK294666|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##AK001532|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC007082|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC011017|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##NM_003079|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1##BC069196|SMARCE1|6605|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	0.0	
chr17	43406920	43407069	reg1037952.p1	3.475	+	TSC_hg19_v1_chr17_-_43394387 BC035576 BC022296 AK290203 AK313085 NM_003954	-12619	-	BC028124 AF433663 AK302184 AK058143 NM_152343	-67539	-	TSC_hg19_v1_chr17_+_43325300 AK311429	-81690	+	TSC_hg19_v1_chr17_-_43487753 AK092891 AX747793 AK300880	80756	-	TSC_hg19_v1_chr17_-_43503000 AK125535 NM_199282	96007	-	TSC_hg19_v1_chr17_-_43510237 AK290650	103233	-	BC035576|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC022296|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK290203|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##AK313085|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##NM_003954|MAP3K14|9020|mitogen-activated protein kinase kinase kinase 14##BC028124|C17orf46|124783|chromosome 17 open reading frame 46##AF433663|C17orf46|124783|chromosome 17 open reading frame 46##AK302184|C17orf46|124783|chromosome 17 open reading frame 46##AK058143|C17orf46|124783|chromosome 17 open reading frame 46##NM_152343|C17orf46|124783|chromosome 17 open reading frame 46##AK311429|LOC100133991|100133991|uncharacterized LOC100133991##AK092891|ARHGAP27|201176|Rho GTPase activating protein 27##AK300880|ARHGAP27|201176|Rho GTPase activating protein 27##AK125535|ARHGAP27|201176|Rho GTPase activating protein 27##NM_199282|ARHGAP27|201176|Rho GTPase activating protein 27##AK290650|ARHGAP27|201176|Rho GTPase activating protein 27	0.0	
chr2	102448694	102448803	reg1044191.p1	3.475	+	TSC_hg19_v1_chr2_+_102314168 NM_001242560 NM_004834 NM_145686 BC064691 AK296396 AF096300 NM_001242559 NM_145687 AB384511 AY212247 AY834276	-134396	+	AK131289 AK298610 NM_001145664 TSC_hg19_v1_chr2_-_102091212	-357555	-	TSC_hg19_v1_chr2_-_102003966 BC032949 BC047514 NM_153836 AB046109	-444759	-	TSC_hg19_v1_chr2_+_102508334 BC045694	59594	+	TSC_hg19_v1_chr2_+_102508389 BC054038 BC010909 BC040077 BC065036 BC051791	59784	+	BC039031 NM_004633 AK130412 AK309161 TSC_hg19_v1_chr2_+_102608421	159615	+	NM_001242560|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_004834|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145686|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC064691|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK296396|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AF096300|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_001242559|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##NM_145687|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY212247|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AY834276|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##AK131289|RFX8|731220|regulatory factor X, 8##AK298610|RFX8|731220|regulatory factor X, 8##NM_001145664|RFX8|731220|regulatory factor X, 8##BC032949|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC047514|CREG2|200407|cellular repressor of E1A-stimulated genes 2##NM_153836|CREG2|200407|cellular repressor of E1A-stimulated genes 2##AB046109|CREG2|200407|cellular repressor of E1A-stimulated genes 2##BC045694|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC054038|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC010909|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC040077|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC065036|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC051791|MAP4K4|9448|mitogen-activated protein kinase kinase kinase kinase 4##BC039031|IL1R2|7850|interleukin 1 receptor, type II##NM_004633|IL1R2|7850|interleukin 1 receptor, type II##AK130412|IL1R2|7850|interleukin 1 receptor, type II##AK309161|IL1R2|7850|interleukin 1 receptor, type II	0.0	
chr22	43216145	43216300	reg1020496.p1	3.475	+	TSC_hg19_v1_chr22_-_43117270 AK312927	-98945	-	TSC_hg19_v1_chr22_-_43116877 BC017068 GU902275 GU902276 GU902277 GU902278 GU902279 GU902280 GU902281 AK130208 NM_017436	-99367	-	AK074388 TSC_hg19_v1_chr22_-_43089917 AJ245581 CU677819 AB590407 DQ891619 DQ894811	-126315	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	36989	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	37048	-	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	37133	-	AK312927|A4GALT|53947|alpha 1,4-galactosyltransferase##BC017068|A4GALT|53947|alpha 1,4-galactosyltransferase##NM_017436|A4GALT|53947|alpha 1,4-galactosyltransferase##AK074388|A4GALT|53947|alpha 1,4-galactosyltransferase##AJ245581|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ891619|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ894811|A4GALT|53947|alpha 1,4-galactosyltransferase##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3	0.0	
chr2	58781217	58781327	reg1037980.p2	3.475	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	-312790	-	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	-507284	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	-507518	+	AY692278 CU676818 AB384297 EU446622 EU446808 BC021098 TSC_hg19_v1_chr2_-_60780520 AB058712 AK297507 AY228763 AJ404611 AJ404612 AJ404613 AK055251 NM_018014 NM_022893 NM_138559 AK300012	1999250	-	AF080216 TSC_hg19_v1_chr2_-_60780784	1999506	-	TSC_hg19_v1_chr2_+_60983397 NM_022894 AF312211 BX647824 BC016738 AK314663 BC068493 BC110906 AK021867 BC111701 BC113747 AY029162 AJ308101 AK023544	2202212	+	AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AY692278|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446622|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##EU446808|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##BC021098|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AB058712|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK297507|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AY228763|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404611|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404612|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AJ404613|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK055251|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_018014|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022893|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_138559|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AK300012|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##AF080216|BCL11A|53335|B-cell CLL/lymphoma 11A (zinc finger protein)##NM_022894|PAPOLG|64895|poly(A) polymerase gamma##AF312211|PAPOLG|64895|poly(A) polymerase gamma##BX647824|PAPOLG|64895|poly(A) polymerase gamma##BC016738|PAPOLG|64895|poly(A) polymerase gamma##AK314663|PAPOLG|64895|poly(A) polymerase gamma##BC068493|PAPOLG|64895|poly(A) polymerase gamma##BC110906|PAPOLG|64895|poly(A) polymerase gamma##AK021867|PAPOLG|64895|poly(A) polymerase gamma##BC111701|PAPOLG|64895|poly(A) polymerase gamma##BC113747|PAPOLG|64895|poly(A) polymerase gamma##AY029162|PAPOLG|64895|poly(A) polymerase gamma##AJ308101|PAPOLG|64895|poly(A) polymerase gamma##AK023544|PAPOLG|64895|poly(A) polymerase gamma	0.550046	CTCF.p2:5:0.550
chr2	68589485	68589665	reg1003656.p2	3.475	+	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	-42475	-	TSC_hg19_v1_chr2_-_68479665 AK307136 AK314893 BC027913 NM_000945	-109980	-	TSC_hg19_v1_chr2_+_68384999 BC008304 NM_020143 AK291715 AF349314 AF164799 AK313204 AK223118 L48692 AK225641 BC018152	-204478	+	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	2797	+	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	2882	+	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	104835	-	NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##AK307136|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##AK314893|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC027913|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##NM_000945|PPP3R1|5534|protein phosphatase 3, regulatory subunit B, alpha##BC008304|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_020143|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK291715|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF349314|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AF164799|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK313204|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK223118|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##AK225641|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##BC018152|PNO1|56902|partner of NOB1 homolog (S. cerevisiae)##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin##DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48	0.0	
chr4	185926643	185926783	reg1006472.p2	3.475	+	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	-179479	-	TSC_hg19_v1_chr4_-_185747123 L09229 AK292798	-179612	-	TSC_hg19_v1_chr4_-_185726866 AK296826	-199810	-	BC140795 BC144567 BC144568 BC144569 NM_001029887	13325	+	NM_001151 TSC_hg19_v1_chr4_+_186064419 J02966 AK291902 BC063643 BC008664 AB209764 BC061589 J03593 DQ891547 DQ894735 AB464231	137757	+	TSC_hg19_v1_chr4_-_186125137 AK091993 BC020772 BC030535 NM_020827	198431	-	AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##L09229|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK292798|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##BC140795|HELT|391723|helt bHLH transcription factor##BC144567|HELT|391723|helt bHLH transcription factor##BC144569|HELT|391723|helt bHLH transcription factor##NM_001029887|HELT|391723|helt bHLH transcription factor##NM_001151|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J02966|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK291902|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC063643|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC008664|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AB209764|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##BC061589|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##J03593|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ891547|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##DQ894735|SLC25A4|291|solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4##AK091993|KIAA1430|57587|KIAA1430##BC020772|KIAA1430|57587|KIAA1430##BC030535|KIAA1430|57587|KIAA1430##NM_020827|KIAA1430|57587|KIAA1430	0.0	
chr6	135578901	135579012	reg1040391.p1	3.475	+	TSC_hg19_v1_chr6_+_135517056 X17469	-61867	+	TSC_hg19_v1_chr6_+_135516916 AJ616799	-62050	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	-76370	+	AY133243 TSC_hg19_v1_chr6_-_135818858 DQ090887	239869	-	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	239929	-	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	240008	+	X17469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY133243|AHI1|54806|Abelson helper integration site 1##DQ090887|AHI1|54806|Abelson helper integration site 1##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271	0.0	
chr7	74988117	74988223	reg1039931.p1	3.475	+	NM_001145064 BC147030 BC147031 TSC_hg19_v1_chr7_-_74867623 BC150658 AK299175 BC045632	-120650	-	NM_001003795 AK098269 AY312850 AK291431 BC067859 BC136849 AK225845 AY312853 AY312851	-479796	+	TSC_hg19_v1_chr7_-_74489687 BC040695 NM_030798	-498478	-	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	400	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	36795	+	AK126486 TSC_hg19_v1_chr7_+_75039644 BC044928 BC103750	51484	+	NM_001145064|GATSL2|729438|GATS protein-like 2##BC147030|GATSL2|729438|GATS protein-like 2##BC147031|GATSL2|729438|GATS protein-like 2##BC150658|GATSL2|729438|GATS protein-like 2##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##NM_001003795|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312850|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312851|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC040695|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##NM_030798|WBSCR16|81554|Williams-Beuren syndrome chromosome region 16##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC044928|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC103750|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1	0.0	
chr8	27192178	27192326	reg1034011.p1	3.475	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-9175	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-9200	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-9235	+	AK314787 U62431 NM_000742	144519	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	156406	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	279953	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	0.0	
chr11	22851495	22851586	reg1027655.p1	3.474	+	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	-195	-	TSC_hg19_v1_chr11_+_22696382 CU680566 AB590780 CR450285	-155142	+	NM_005256 TSC_hg19_v1_chr11_+_22696327 U95032	-155204	+	NM_001195637	30431	-	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	1667109	+	NM_031418 AK302659	3502190	+	AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##CR450285|GAS2|2620|growth arrest-specific 2##NM_005256|GAS2|2620|growth arrest-specific 2##U95032|GAS2|2620|growth arrest-specific 2##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2##NM_031418|ANO3|63982|anoctamin 3##AK302659|ANO3|63982|anoctamin 3	0.035542	
chr11	65239444	65239624	reg1014111.p3	3.474	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	-46011	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	-47134	+	TSC_hg19_v1_chr11_+_65190274 AK026198	-49256	+	TSC_hg19_v1_chr11_+_65265158 EF177381	25669	+	TSC_hg19_v1_chr11_+_65266515 BC025986 BX538238 FJ209305	26967	+	TSC_hg19_v1_chr11_+_65266869 BC104662	27265	+	AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##EF177381|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BC025986|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BX538238|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)	0.0	
chr16	85587201	85587305	reg1039063.p2	3.474	+	BC093665 BC111944 AK126284 NM_198491	-441199	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-525883	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-542124	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	57768	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	59700	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	135289	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.0	
chr17	5145673	5145739	reg1035583.p1	3.474	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	-7605	-	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-50326	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-50533	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	39960	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	177219	-	AY775314 AY775315 AY775316 AY775317 AY775318 AY775319 AY775320 AY775321 AY775323 NM_001033002 NM_001160243 NM_001160244 NM_001160246 NM_001160266 NM_001160267	177254	+	DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa##AY775314|RPAIN|84268|RPA interacting protein##AY775315|RPAIN|84268|RPA interacting protein##AY775316|RPAIN|84268|RPA interacting protein##AY775317|RPAIN|84268|RPA interacting protein##AY775318|RPAIN|84268|RPA interacting protein##AY775319|RPAIN|84268|RPA interacting protein##AY775320|RPAIN|84268|RPA interacting protein##AY775321|RPAIN|84268|RPA interacting protein##AY775323|RPAIN|84268|RPA interacting protein##NM_001033002|RPAIN|84268|RPA interacting protein##NM_001160243|RPAIN|84268|RPA interacting protein##NM_001160244|RPAIN|84268|RPA interacting protein##NM_001160246|RPAIN|84268|RPA interacting protein##NM_001160266|RPAIN|84268|RPA interacting protein##NM_001160267|RPAIN|84268|RPA interacting protein	0.021999	
chr17	74816276	74816408	reg1043615.p1	3.474	+	TSC_hg19_v1_chr17_+_74734111 AK308058 AF015184 AK000233	-82189	+	AF015183 NM_001242532 NM_001242533 NM_001242535 NM_001242536 NM_001242537 NM_024311	-82817	+	TSC_hg19_v1_chr17_-_74733465 AK124792 NM_001195427 NM_003016	-82886	-	TSC_hg19_v1_chr17_+_74864556 AK057861 AB235153 BC041577 NM_001199172 NM_144677 BC062354	48324	+	AB114297 NM_198955 BC144361	52418	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	268455	+	AK308058|MFSD11|79157|major facilitator superfamily domain containing 11##AF015184|MFSD11|79157|major facilitator superfamily domain containing 11##AK000233|MFSD11|79157|major facilitator superfamily domain containing 11##AF015183|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242532|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242533|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242535|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242536|MFSD11|79157|major facilitator superfamily domain containing 11##NM_001242537|MFSD11|79157|major facilitator superfamily domain containing 11##NM_024311|MFSD11|79157|major facilitator superfamily domain containing 11##AK124792|SRSF2|6427|serine/arginine-rich splicing factor 2##NM_001195427|SRSF2|6427|serine/arginine-rich splicing factor 2##NM_003016|SRSF2|6427|serine/arginine-rich splicing factor 2##AB235153|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC041577|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001199172|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_144677|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC062354|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338	0.0	
chr18	29190962	29191088	reg1036227.p1	3.474	+	NM_000371 TSC_hg19_v1_chr18_+_29171839 AK312051 BC005310 BC020791 D00096 GU727633 K02091 M10605 X59498 AF162690 BT007189 CR456908 DQ778081 DQ839490 U19780	-19228	+	NM_001943 TSC_hg19_v1_chr18_+_29078205 BC099655 BC099656 BC099657 Z26317 AK308408	-112882	+	AK290367 NM_001944 M76482	-163281	+	AB024742 BC074835 BC074884 BC069620 BC069642 AF069054 AK314860 AF097159 NM_004775	73514	-	BC103999 BC104000 BC104001 AK302337 NM_001034172	149745	-	BC127109 BC127110 TSC_hg19_v1_chr18_-_29523061	331999	-	NM_000371|TTR|7276|transthyretin##AK312051|TTR|7276|transthyretin##BC005310|TTR|7276|transthyretin##BC020791|TTR|7276|transthyretin##D00096|TTR|7276|transthyretin##GU727633|TTR|7276|transthyretin##K02091|TTR|7276|transthyretin##M10605|TTR|7276|transthyretin##X59498|TTR|7276|transthyretin##AF162690|TTR|7276|transthyretin##BT007189|TTR|7276|transthyretin##CR456908|TTR|7276|transthyretin##DQ839490|TTR|7276|transthyretin##U19780|TTR|7276|transthyretin##NM_001943|DSG2|1829|desmoglein 2##BC099655|DSG2|1829|desmoglein 2##BC099656|DSG2|1829|desmoglein 2##BC099657|DSG2|1829|desmoglein 2##Z26317|DSG2|1829|desmoglein 2##AK308408|DSG2|1829|desmoglein 2##AK290367|DSG3|1830|desmoglein 3##NM_001944|DSG3|1830|desmoglein 3##M76482|DSG3|1830|desmoglein 3##AB024742|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074835|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC074884|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069620|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC069642|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF069054|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AK314860|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##AF097159|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##NM_004775|B4GALT6|9331|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6##BC103999|MCART2|147407|mitochondrial carrier triple repeat 2##BC104000|MCART2|147407|mitochondrial carrier triple repeat 2##BC104001|MCART2|147407|mitochondrial carrier triple repeat 2##AK302337|MCART2|147407|mitochondrial carrier triple repeat 2##NM_001034172|MCART2|147407|mitochondrial carrier triple repeat 2##BC127109|TRAPPC8|22878|trafficking protein particle complex 8##BC127110|TRAPPC8|22878|trafficking protein particle complex 8	0.01267	
chr1	87379835	87380016	reg1036286.p2	3.474	+	AL833575 TSC_hg19_v1_chr1_-_87379810 BC005294 BC021697	-104	-	CU675093 AF051894 AF288991 TSC_hg19_v1_chr1_-_87379800 AK225252 AK225640 BC016359	-133	-	TSC_hg19_v1_chr1_+_87170526 BC007455 AF151819 AF257318 AF263293 AB385341 DQ893029 DQ896273	-209371	+	TSC_hg19_v1_chr1_-_87380011 NM_004261 NM_203341	132	-	TSC_hg19_v1_chr1_+_87380374 BC025384 BC025990 NM_001134492 NM_012262 AK023260 AB024568 BC108735	428	+	AB007917 TSC_hg19_v1_chr1_+_87380462	532	+	AL833575|SEP15|9403|15 kDa selenoprotein##BC005294|SEP15|9403|15 kDa selenoprotein##BC021697|SEP15|9403|15 kDa selenoprotein##AF051894|SEP15|9403|15 kDa selenoprotein##AF288991|SEP15|9403|15 kDa selenoprotein##AK225252|SEP15|9403|15 kDa selenoprotein##AK225640|SEP15|9403|15 kDa selenoprotein##BC016359|SEP15|9403|15 kDa selenoprotein##BC007455|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF151819|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF257318|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##AF263293|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##DQ893029|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##DQ896273|SH3GLB1|51100|SH3-domain GRB2-like endophilin B1##NM_004261|SEP15|9403|15 kDa selenoprotein##NM_203341|SEP15|9403|15 kDa selenoprotein##BC025384|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC025990|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_001134492|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##NM_012262|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AK023260|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AB024568|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##BC108735|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1##AB007917|HS2ST1|9653|heparan sulfate 2-O-sulfotransferase 1	0.0	
chr2	7571245	7571425	reg1040671.p1	3.474	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-513748	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-553472	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-564632	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1250868	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1406384	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1572486	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr3	121793848	121794028	reg1027458.p2	3.474	+	NM_001206924 NM_001206925 NM_175862 AK294663 AK301237 AK316203 BC040261 L25259 AK291497 AK313103	-19684	+	AY672837 AY672839 BC044240 AY134857 TSC_hg19_v1_chr3_-_121741095 AK129974 NM_001199799 NM_001199800 NM_175924	-52891	-	NM_001145998 NM_021082 AK289820 AK296895 AK302002 AK304189 BC020743 BC044572 BC038445 S78203	-180706	+	NM_006889 NM_176892 U04343	2784	+	NM_000388 U20759	108591	+	NM_001178065 U20760	109242	+	NM_001206924|CD86|942|CD86 molecule##NM_001206925|CD86|942|CD86 molecule##NM_175862|CD86|942|CD86 molecule##AK294663|CD86|942|CD86 molecule##AK301237|CD86|942|CD86 molecule##AK316203|CD86|942|CD86 molecule##BC040261|CD86|942|CD86 molecule##L25259|CD86|942|CD86 molecule##AK291497|CD86|942|CD86 molecule##AK313103|CD86|942|CD86 molecule##AY672837|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY672839|ILDR1|286676|immunoglobulin-like domain containing receptor 1##BC044240|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AY134857|ILDR1|286676|immunoglobulin-like domain containing receptor 1##AK129974|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199799|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001199800|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_175924|ILDR1|286676|immunoglobulin-like domain containing receptor 1##NM_001145998|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##NM_021082|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK289820|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK296895|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK302002|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##AK304189|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC020743|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC044572|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##BC038445|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##S78203|SLC15A2|6565|solute carrier family 15 (H+/peptide transporter), member 2##NM_006889|CD86|942|CD86 molecule##NM_176892|CD86|942|CD86 molecule##U04343|CD86|942|CD86 molecule##NM_000388|CASR|846|calcium-sensing receptor##U20759|CASR|846|calcium-sensing receptor##NM_001178065|CASR|846|calcium-sensing receptor##U20760|CASR|846|calcium-sensing receptor	0.0	
chr3	98710350	98710488	reg1033822.p1	3.474	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-89927	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-258832	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-259174	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	647031	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	826326	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	884572	-	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like	0.959079	CTCF.p2:12:0.959
chr9	35727030	35727135	reg1038632.p2	3.474	+	M74817 M75165 X06825 M12125 AK304803 AK223258 AK294522 AK300249 TSC_hg19_v1_chr9_-_35689923 NM_003289 NM_213674	-37105	-	AK130045 EU106177 DQ892908 DQ896159 BC011776 TSC_hg19_v1_chr9_-_35689884	-37241	-	BC014950 EF122496 NM_001216 X66839 AJ010588 CU677133 DQ892208 DQ895404	-53179	+	TSC_hg19_v1_chr9_-_35732096 BC020881	5014	-	TSC_hg19_v1_chr9_-_35732126 AF177198	5039	-	TSC_hg19_v1_chr9_-_35732182 BC042923	5096	-	M74817|TPM2|7169|tropomyosin 2 (beta)##M75165|TPM2|7169|tropomyosin 2 (beta)##X06825|TPM2|7169|tropomyosin 2 (beta)##M12125|TPM2|7169|tropomyosin 2 (beta)##AK304803|TPM2|7169|tropomyosin 2 (beta)##AK223258|TPM2|7169|tropomyosin 2 (beta)##AK294522|TPM2|7169|tropomyosin 2 (beta)##AK300249|TPM2|7169|tropomyosin 2 (beta)##NM_003289|TPM2|7169|tropomyosin 2 (beta)##NM_213674|TPM2|7169|tropomyosin 2 (beta)##AK130045|TPM2|7169|tropomyosin 2 (beta)##EU106177|TPM2|7169|tropomyosin 2 (beta)##DQ892908|TPM2|7169|tropomyosin 2 (beta)##DQ896159|TPM2|7169|tropomyosin 2 (beta)##BC011776|TPM2|7169|tropomyosin 2 (beta)##BC014950|CA9|768|carbonic anhydrase IX##EF122496|CA9|768|carbonic anhydrase IX##NM_001216|CA9|768|carbonic anhydrase IX##X66839|CA9|768|carbonic anhydrase IX##AJ010588|CA9|768|carbonic anhydrase IX##DQ892208|CA9|768|carbonic anhydrase IX##DQ895404|CA9|768|carbonic anhydrase IX##BC020881|TLN1|7094|talin 1##AF177198|TLN1|7094|talin 1##BC042923|TLN1|7094|talin 1	0.318831	CTCF.p2:7:0.319
chrX	24168365	24168435	reg1024213.p1	3.474	+	X59739 X59740 TSC_hg19_v1_chrX_+_24167864	-528	+	AB209892 NM_001178086 NM_001178095 X59738 TSC_hg19_v1_chrX_+_24167845 NM_001178084 NM_001178085 NM_003410	-608	+	TSC_hg19_v1_chrX_+_24073072 AK222577 AK290397 AK312247 AB590041 CU676476 DQ891794 DQ894977 AB451230 AB451353 L19161	-95322	+	NM_001136233	163031	-	NM_001136234	212477	+	NM_001142386 NM_005391 AK301965 TSC_hg19_v1_chrX_+_24483405 BC015948 L42452 CU677533	315057	+	X59739|ZFX|7543|zinc finger protein, X-linked##X59740|ZFX|7543|zinc finger protein, X-linked##AB209892|ZFX|7543|zinc finger protein, X-linked##NM_001178086|ZFX|7543|zinc finger protein, X-linked##NM_001178095|ZFX|7543|zinc finger protein, X-linked##X59738|ZFX|7543|zinc finger protein, X-linked##NM_001178084|ZFX|7543|zinc finger protein, X-linked##NM_001178085|ZFX|7543|zinc finger protein, X-linked##NM_003410|ZFX|7543|zinc finger protein, X-linked##AK222577|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK290397|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AK312247|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ891794|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##DQ894977|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451230|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##AB451353|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##L19161|EIF2S3|1968|eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa##NM_001136233|FAM48B2|170067|family with sequence similarity 48, member B2##NM_001136234|FAM48B1|100130302|family with sequence similarity 48, member B1##NM_001142386|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##NM_005391|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##AK301965|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##BC015948|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3##L42452|PDK3|5165|pyruvate dehydrogenase kinase, isozyme 3	0.488071	CTCF.p2:-24:0.488
chr10	121448615	121448736	reg1039946.p1	3.473	+	TSC_hg19_v1_chr10_+_121411086 BC001445 AK291333 BC014656 DQ893416 DQ896772 CU675397 AB385565	-37539	+	TSC_hg19_v1_chr10_+_121411079 BC107786	-37600	+	TSC_hg19_v1_chr10_+_121411053 AL137582	-37622	+	TSC_hg19_v1_chr10_+_121485568 NM_001243195 NM_014937 AK307758	36863	+	TSC_hg19_v1_chr10_+_121485596 BC067820 AB023183	36939	+	TSC_hg19_v1_chr10_+_121485653 BC111493 BC052367 BC082755 AB385409	37030	+	AK291333|BAG3|9531|BCL2-associated athanogene 3##BC014656|BAG3|9531|BCL2-associated athanogene 3##DQ893416|BAG3|9531|BCL2-associated athanogene 3##DQ896772|BAG3|9531|BCL2-associated athanogene 3##BC107786|BAG3|9531|BCL2-associated athanogene 3##AL137582|BAG3|9531|BCL2-associated athanogene 3##NM_001243195|INPP5F|22876|inositol polyphosphate-5-phosphatase F##NM_014937|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK307758|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC067820|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AB023183|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC111493|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC052367|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC082755|INPP5F|22876|inositol polyphosphate-5-phosphatase F	0.0	
chr10	43655779	43655926	reg1037796.p2	3.473	+	TSC_hg19_v1_chr10_+_43633892 AB090811 BC030268 NM_018590 BX640967 AB079252 AK125300 AF086458	-21910	+	TSC_hg19_v1_chr10_+_43572516 NM_020630 NM_020975 BC003072 BC004257 X15262 AK291807 AB384817 CU678360 CU678648 Y12528	-83249	+	TSC_hg19_v1_chr10_+_43278248 AK308420 BC043345	-377602	+	BC022548 NM_145313	106514	-	BC054876 AY358584 NM_001184963 NM_173160	211238	+	TSC_hg19_v1_chr10_-_43892200 NM_001098208	236367	-	AB090811|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BC030268|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_018590|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##BX640967|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AB079252|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AK125300|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##AF086458|CSGALNACT2|55454|chondroitin sulfate N-acetylgalactosaminyltransferase 2##NM_020630|RET|5979|ret proto-oncogene##NM_020975|RET|5979|ret proto-oncogene##BC003072|RET|5979|ret proto-oncogene##BC004257|RET|5979|ret proto-oncogene##X15262|RET|5979|ret proto-oncogene##AK291807|RET|5979|ret proto-oncogene##Y12528|RET|5979|ret proto-oncogene##AK308420|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC043345|BMS1|9790|BMS1 homolog, ribosome assembly protein (yeast)##BC022548|RASGEF1A|221002|RasGEF domain family, member 1A##NM_145313|RASGEF1A|221002|RasGEF domain family, member 1A##BC054876|FXYD4|53828|FXYD domain containing ion transport regulator 4##AY358584|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001184963|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_173160|FXYD4|53828|FXYD domain containing ion transport regulator 4##NM_001098208|HNRNPF|3185|heterogeneous nuclear ribonucleoprotein F	0.0	
chr10	73922750	73922888	reg1025708.p1	3.473	+	D87465 TSC_hg19_v1_chr10_-_73848773 NM_001134434 NM_014767	-74042	-	BC023558 NM_001244950	-74289	-	TSC_hg19_v1_chr10_-_73848310 AJ001453	-74479	-	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	52945	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	52969	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	53292	-	D87465|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##NM_001134434|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##NM_014767|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##BC023558|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##NM_001244950|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AJ001453|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1	0.0	
chr1	117594107	117594228	reg1038725.p1	3.473	+	AK307542 NM_004258 AK298237 BC130327 BC136484 BC171768 Z33642 AB384713	-49762	+	TSC_hg19_v1_chr1_+_117452678 AK074637 AB037857 BC152454 NM_020440 BC098142 BC139718 BC063317 BC114520	-141525	+	AK313614 AK301154 AK223393 NM_001767 AK303367 M16336 BC033583 M14362 M16445 AB590327 DQ890953 DQ894115 AK310676	-297060	+	AK291017 TSC_hg19_v1_chr1_+_117602939	8757	+	TSC_hg19_v1_chr1_+_117602948 AF073771 NM_003594 AF080255 BC015341 BC030058	8787	+	AK023243 AK222901 BC034943 AY669488 NM_001145635 NM_025188	70212	-	AK307542|CD101|9398|CD101 molecule##NM_004258|CD101|9398|CD101 molecule##AK298237|CD101|9398|CD101 molecule##BC130327|CD101|9398|CD101 molecule##BC136484|CD101|9398|CD101 molecule##BC171768|CD101|9398|CD101 molecule##Z33642|CD101|9398|CD101 molecule##AK074637|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AB037857|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC152454|PTGFRN|5738|prostaglandin F2 receptor negative regulator##NM_020440|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC098142|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC139718|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC063317|PTGFRN|5738|prostaglandin F2 receptor negative regulator##BC114520|PTGFRN|5738|prostaglandin F2 receptor negative regulator##AK313614|CD2|914|CD2 molecule##AK301154|CD2|914|CD2 molecule##AK223393|CD2|914|CD2 molecule##NM_001767|CD2|914|CD2 molecule##AK303367|CD2|914|CD2 molecule##M16336|CD2|914|CD2 molecule##BC033583|CD2|914|CD2 molecule##M14362|CD2|914|CD2 molecule##M16445|CD2|914|CD2 molecule##DQ890953|CD2|914|CD2 molecule##DQ894115|CD2|914|CD2 molecule##AK310676|CD2|914|CD2 molecule##AK291017|TTF2|8458|transcription termination factor, RNA polymerase II##AF073771|TTF2|8458|transcription termination factor, RNA polymerase II##NM_003594|TTF2|8458|transcription termination factor, RNA polymerase II##AF080255|TTF2|8458|transcription termination factor, RNA polymerase II##BC015341|TTF2|8458|transcription termination factor, RNA polymerase II##BC030058|TTF2|8458|transcription termination factor, RNA polymerase II##AK023243|TRIM45|80263|tripartite motif containing 45##AK222901|TRIM45|80263|tripartite motif containing 45##BC034943|TRIM45|80263|tripartite motif containing 45##AY669488|TRIM45|80263|tripartite motif containing 45##NM_001145635|TRIM45|80263|tripartite motif containing 45##NM_025188|TRIM45|80263|tripartite motif containing 45	0.0	
chr12	53614608	53614684	reg1044183.p2	3.473	+	TSC_hg19_v1_chr12_-_53614137 AK301057 AK297277 NM_001042728 NM_001243732	-488	-	HQ692829 TSC_hg19_v1_chr12_-_53613945 AK316259 M32074 AK297801	-684	-	TSC_hg19_v1_chr12_-_53601066 AK300960	-13574	-	TSC_hg19_v1_chr12_-_53625973 BC064524 AK297023 M24857 L12060 BC072462 AK297110 AK290588 NM_000966 NM_001243730 NM_001243731	11290	-	NM_001170790 AK097576	30756	+	TSC_hg19_v1_chr12_+_53645885 NM_032889 AK074684	31234	+	AK301057|RARG|5916|retinoic acid receptor, gamma##AK297277|RARG|5916|retinoic acid receptor, gamma##NM_001042728|RARG|5916|retinoic acid receptor, gamma##NM_001243732|RARG|5916|retinoic acid receptor, gamma##HQ692829|RARG|5916|retinoic acid receptor, gamma##AK316259|RARG|5916|retinoic acid receptor, gamma##M32074|RARG|5916|retinoic acid receptor, gamma##AK297801|RARG|5916|retinoic acid receptor, gamma##AK300960|ITGB7|3695|integrin, beta 7##BC064524|RARG|5916|retinoic acid receptor, gamma##AK297023|RARG|5916|retinoic acid receptor, gamma##M24857|RARG|5916|retinoic acid receptor, gamma##L12060|RARG|5916|retinoic acid receptor, gamma##BC072462|RARG|5916|retinoic acid receptor, gamma##AK297110|RARG|5916|retinoic acid receptor, gamma##AK290588|RARG|5916|retinoic acid receptor, gamma##NM_000966|RARG|5916|retinoic acid receptor, gamma##NM_001243730|RARG|5916|retinoic acid receptor, gamma##NM_001243731|RARG|5916|retinoic acid receptor, gamma##NM_001170790|MFSD5|84975|major facilitator superfamily domain containing 5##AK097576|MFSD5|84975|major facilitator superfamily domain containing 5##NM_032889|MFSD5|84975|major facilitator superfamily domain containing 5##AK074684|MFSD5|84975|major facilitator superfamily domain containing 5	0.0	
chr13	37310624	37310804	reg1005126.p2	3.473	+	BC036540 NM_203451 AK294236	-62612	+	TSC_hg19_v1_chr13_+_37006631 AK225146 U66838 BC035479 BC036346 AB462995 AM393372 BT019577 DQ891303 DQ894488	-304021	+	AK314261 NM_001111045 NM_003914	-304306	+	TSC_hg19_v1_chr13_+_37393356 NM_000538 AK313912 BC026088 DQ891169 DQ893581 DQ894352	82685	+	TSC_hg19_v1_chr13_-_37494376 BC067766 NM_001127217 NM_005905	183675	-	CU680348 TSC_hg19_v1_chr13_-_37573465 AF161498 BC012531 AF183413 AK299126	262739	-	BC036540|SERTM1|400120|serine-rich and transmembrane domain containing 1##NM_203451|SERTM1|400120|serine-rich and transmembrane domain containing 1##AK294236|SERTM1|400120|serine-rich and transmembrane domain containing 1##AK225146|CCNA1|8900|cyclin A1##U66838|CCNA1|8900|cyclin A1##BC035479|CCNA1|8900|cyclin A1##BC036346|CCNA1|8900|cyclin A1##AM393372|CCNA1|8900|cyclin A1##BT019577|CCNA1|8900|cyclin A1##DQ891303|CCNA1|8900|cyclin A1##DQ894488|CCNA1|8900|cyclin A1##AK314261|CCNA1|8900|cyclin A1##NM_001111045|CCNA1|8900|cyclin A1##NM_003914|CCNA1|8900|cyclin A1##NM_000538|RFXAP|5994|regulatory factor X-associated protein##AK313912|RFXAP|5994|regulatory factor X-associated protein##BC026088|RFXAP|5994|regulatory factor X-associated protein##DQ891169|RFXAP|5994|regulatory factor X-associated protein##DQ893581|RFXAP|5994|regulatory factor X-associated protein##DQ894352|RFXAP|5994|regulatory factor X-associated protein##BC067766|SMAD9|4093|SMAD family member 9##NM_001127217|SMAD9|4093|SMAD family member 9##NM_005905|SMAD9|4093|SMAD family member 9##AF161498|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##BC012531|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##AF183413|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)##AK299126|ALG5|29880|asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisiae)	0.0	
chr16	10125479	10125579	reg1041084.p1	3.473	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-939926	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-939989	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-1068234	-	BC143273 U09002 NM_001134408	150304	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	150659	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	151148	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.175238	
chr16	28935363	28935470	reg1040986.p2	3.473	+	TSC_hg19_v1_chr16_+_28891234 AK128456	-44113	+	BX647367 NM_004320 NM_173201 TSC_hg19_v1_chr16_+_28889808 BX537784 BX537389 BX647365 BX648544 BC104452 BC104453 BX647366 BX649072 AK291314 BC037354 AB527323	-45516	+	TSC_hg19_v1_chr16_+_28877593 BC010704	-57827	+	AY129017 TSC_hg19_v1_chr16_-_28936536 AK295229 BC046118 AK026935 NM_024816 BC058900	1092	-	NM_001178098 NM_001770 BC006338 AK301363 AK313577 BC052294 M21097 X13312 AK307295 M28170 DQ893016 DQ896261 AK130657 AK301167 AK304456	7886	+	BC068007 BC101741 BC112182 TSC_hg19_v1_chr16_+_28962327 AF458593 NM_032815 AK074761 AK304172	26822	+	AK128456|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX647367|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##NM_004320|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##NM_173201|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX537784|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX537389|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX647365|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX648544|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC104452|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC104453|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX647366|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BX649072|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##AK291314|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC037354|ATP2A1|487|ATPase, Ca++ transporting, cardiac muscle, fast twitch 1##BC010704|SH2B1|25970|SH2B adaptor protein 1##AK295229|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC046118|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##AK026935|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##NM_024816|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##BC058900|RABEP2|79874|rabaptin, RAB GTPase binding effector protein 2##NM_001178098|CD19|930|CD19 molecule##NM_001770|CD19|930|CD19 molecule##BC006338|CD19|930|CD19 molecule##AK301363|CD19|930|CD19 molecule##AK313577|CD19|930|CD19 molecule##BC052294|CD19|930|CD19 molecule##M21097|CD19|930|CD19 molecule##X13312|CD19|930|CD19 molecule##AK307295|CD19|930|CD19 molecule##DQ893016|CD19|930|CD19 molecule##DQ896261|CD19|930|CD19 molecule##AK130657|CD19|930|CD19 molecule##AK301167|CD19|930|CD19 molecule##AK304456|CD19|930|CD19 molecule##BC068007|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC101741|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##BC112182|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AF458593|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##NM_032815|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK074761|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein##AK304172|NFATC2IP|84901|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein	0.0	
chr22	24830653	24830719	reg1039085.p2	3.473	+	NM_000675 AK123058 EU036693 AK301420 BC013780	-7121	+	TSC_hg19_v1_chr22_+_24819870 EU036694	-10806	+	TSC_hg19_v1_chr22_+_24666804 NM_001145468 NM_015330 AK097129 AK301482 AB209022 AL832425 BC005093 BC136471	-163846	+	AK314727 CR627429 CR456375 NM_016327 BC131703 TSC_hg19_v1_chr22_+_24891299 AF163312 AB013885 BC033388 AB528843 BC139840 BC139843 CU013080 CU013368	60555	+	CU687038 TSC_hg19_v1_chr22_-_24951093 BC053529 AK296893	120359	-	TSC_hg19_v1_chr22_-_24951145 AK054681 AK294972	120457	-	NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor##EU036694|ADORA2A|135|adenosine A2a receptor##NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK314727|UPB1|51733|ureidopropionase, beta##CR627429|UPB1|51733|ureidopropionase, beta##CR456375|UPB1|51733|ureidopropionase, beta##NM_016327|UPB1|51733|ureidopropionase, beta##BC131703|UPB1|51733|ureidopropionase, beta##AF163312|UPB1|51733|ureidopropionase, beta##AB013885|UPB1|51733|ureidopropionase, beta##BC033388|UPB1|51733|ureidopropionase, beta##BC139840|UPB1|51733|ureidopropionase, beta##BC139843|UPB1|51733|ureidopropionase, beta##CU013080|UPB1|51733|ureidopropionase, beta##CU013368|UPB1|51733|ureidopropionase, beta##BC053529|C22orf13|83606|chromosome 22 open reading frame 13##AK296893|C22orf13|83606|chromosome 22 open reading frame 13##AK054681|C22orf13|83606|chromosome 22 open reading frame 13##AK294972|C22orf13|83606|chromosome 22 open reading frame 13	0.0	
chr2	228336533	228336696	reg1008531.p1	3.473	+	AY358671 BC137256 BC137257 BC035754 TSC_hg19_v1_chr2_-_228244023 AK026453 NM_024795	-92600	-	AF246239 NM_020194	-144387	+	TSC_hg19_v1_chr2_+_228189983 AK026137 BC093024 AF258660	-146570	+	TSC_hg19_v1_chr2_+_228336861 AK097451	228	+	TSC_hg19_v1_chr2_+_228336877 NM_001135187 NM_001135188 NM_001135189 NM_004504 BC030592 X89478 BC096272 BC096273 BC096274 BC096275 AB527534 CU688928	392	+	TSC_hg19_v1_chr2_+_228356287 AK295030	19677	+	AY358671|TM4SF20|79853|transmembrane 4 L six family member 20##BC137256|TM4SF20|79853|transmembrane 4 L six family member 20##BC137257|TM4SF20|79853|transmembrane 4 L six family member 20##BC035754|TM4SF20|79853|transmembrane 4 L six family member 20##AK026453|TM4SF20|79853|transmembrane 4 L six family member 20##NM_024795|TM4SF20|79853|transmembrane 4 L six family member 20##AF246239|MFF|56947|mitochondrial fission factor##NM_020194|MFF|56947|mitochondrial fission factor##AK026137|MFF|56947|mitochondrial fission factor##BC093024|MFF|56947|mitochondrial fission factor##AF258660|MFF|56947|mitochondrial fission factor##AK097451|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135187|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135188|AGFG1|3267|ArfGAP with FG repeats 1##NM_001135189|AGFG1|3267|ArfGAP with FG repeats 1##NM_004504|AGFG1|3267|ArfGAP with FG repeats 1##BC030592|AGFG1|3267|ArfGAP with FG repeats 1##X89478|AGFG1|3267|ArfGAP with FG repeats 1##BC096272|AGFG1|3267|ArfGAP with FG repeats 1##BC096273|AGFG1|3267|ArfGAP with FG repeats 1##BC096274|AGFG1|3267|ArfGAP with FG repeats 1##BC096275|AGFG1|3267|ArfGAP with FG repeats 1##AK295030|AGFG1|3267|ArfGAP with FG repeats 1	0.0	
chr3	5023787	5023883	reg1044061.p1	3.473	+	AK293205 TSC_hg19_v1_chr3_+_5021310 EU446668 AB463428 CU687360 CR456921	-2481	+	TSC_hg19_v1_chr3_+_5021147 BC068292 AB004066 BC082238	-2654	+	NM_003670 TSC_hg19_v1_chr3_+_5021121 AK312509	-2719	+	BC063125 NM_018184 TSC_hg19_v1_chr3_+_5163976 AK001564 AK298951 AK303872 AK295465 BC013131	140120	+	TSC_hg19_v1_chr3_+_5164041 AB528951 AB118751 CR457264	140256	+	TSC_hg19_v1_chr3_+_5229344 AK298511	205492	+	AK293205|BHLHE40|8553|basic helix-loop-helix family, member e40##EU446668|BHLHE40|8553|basic helix-loop-helix family, member e40##CR456921|BHLHE40|8553|basic helix-loop-helix family, member e40##BC068292|BHLHE40|8553|basic helix-loop-helix family, member e40##AB004066|BHLHE40|8553|basic helix-loop-helix family, member e40##BC082238|BHLHE40|8553|basic helix-loop-helix family, member e40##NM_003670|BHLHE40|8553|basic helix-loop-helix family, member e40##AK312509|BHLHE40|8553|basic helix-loop-helix family, member e40##BC063125|ARL8B|55207|ADP-ribosylation factor-like 8B##NM_018184|ARL8B|55207|ADP-ribosylation factor-like 8B##AK001564|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298951|ARL8B|55207|ADP-ribosylation factor-like 8B##AK303872|ARL8B|55207|ADP-ribosylation factor-like 8B##AK295465|ARL8B|55207|ADP-ribosylation factor-like 8B##BC013131|ARL8B|55207|ADP-ribosylation factor-like 8B##AB118751|ARL8B|55207|ADP-ribosylation factor-like 8B##CR457264|ARL8B|55207|ADP-ribosylation factor-like 8B##AK298511|EDEM1|9695|ER degradation enhancer, mannosidase alpha-like 1	0.0	
chr4	68454680	68454822	reg1042448.p1	3.473	+	TSC_hg19_v1_chr4_+_68424444 AB023483 NM_012108 AK313676 BC014958 AB528919 CU677135	-30266	+	TSC_hg19_v1_chr4_-_68411282 NM_001812	-43473	-	TSC_hg19_v1_chr4_-_68411224 BC030695 BX648166 BC041117 AK307928 AK308170 M95724	-43543	-	TSC_hg19_v1_chr4_-_68566842 AB014773 AB463334 AM392673 EF623993	112067	-	TSC_hg19_v1_chr4_-_68566867 AL832015 AL832458 AK094969 AK314371 BC031637 BC126484 BC126486 NM_018227	112120	-	NM_000406 NM_001012763	167052	-	AB023483|STAP1|26228|signal transducing adaptor family member 1##NM_012108|STAP1|26228|signal transducing adaptor family member 1##AK313676|STAP1|26228|signal transducing adaptor family member 1##BC014958|STAP1|26228|signal transducing adaptor family member 1##NM_001812|CENPC1|1060|centromere protein C 1##BC030695|CENPC1|1060|centromere protein C 1##BX648166|CENPC1|1060|centromere protein C 1##BC041117|CENPC1|1060|centromere protein C 1##AK307928|CENPC1|1060|centromere protein C 1##AK308170|CENPC1|1060|centromere protein C 1##M95724|CENPC1|1060|centromere protein C 1##AB014773|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AM392673|UBA6|55236|ubiquitin-like modifier activating enzyme 6##EF623993|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AL832015|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AL832458|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK094969|UBA6|55236|ubiquitin-like modifier activating enzyme 6##AK314371|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC031637|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC126484|UBA6|55236|ubiquitin-like modifier activating enzyme 6##BC126486|UBA6|55236|ubiquitin-like modifier activating enzyme 6##NM_018227|UBA6|55236|ubiquitin-like modifier activating enzyme 6##NM_000406|GNRHR|2798|gonadotropin-releasing hormone receptor##NM_001012763|GNRHR|2798|gonadotropin-releasing hormone receptor	0.058413	
chr6	135376123	135376276	reg1036708.p2	3.473	+	TSC_hg19_v1_chr6_-_135375958 AK024258 AK295545 AF161394 U87791 AJ459826 AJ459827 NM_001145158 NM_001145207 NM_006620	-205	-	CU674720 EU831981 EU832074 TSC_hg19_v1_chr6_-_135375948 BC040849 AJ420551 BC001465	-311	-	AK290784 AK298325 BC020849 BC114473 BC113862 AF303134 AK074266 AK222848 TSC_hg19_v1_chr6_-_135271252 NM_001193480 NM_022568 NM_170771	-104967	-	TSC_hg19_v1_chr6_+_135502445 AJ606317 AJ606318 AJ606319 AJ606320 AJ606321 AJ606322 AJ606323 AJ606324 NM_001130172 NM_001130173 NM_001161656 NM_001161657 NM_001161658 NM_001161659 NM_001161660 NM_005375 X52125	126249	+	TSC_hg19_v1_chr6_+_135502507 BC064955	126296	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	126387	+	AK024258|HBS1L|10767|HBS1-like (S. cerevisiae)##AK295545|HBS1L|10767|HBS1-like (S. cerevisiae)##AF161394|HBS1L|10767|HBS1-like (S. cerevisiae)##U87791|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459826|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ459827|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145158|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_001145207|HBS1L|10767|HBS1-like (S. cerevisiae)##NM_006620|HBS1L|10767|HBS1-like (S. cerevisiae)##EU831981|HBS1L|10767|HBS1-like (S. cerevisiae)##EU832074|HBS1L|10767|HBS1-like (S. cerevisiae)##BC040849|HBS1L|10767|HBS1-like (S. cerevisiae)##AJ420551|HBS1L|10767|HBS1-like (S. cerevisiae)##BC001465|HBS1L|10767|HBS1-like (S. cerevisiae)##AK290784|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK298325|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC020849|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC114473|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##BC113862|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AF303134|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK074266|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AK222848|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_001193480|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_022568|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##NM_170771|ALDH8A1|64577|aldehyde dehydrogenase 8 family, member A1##AJ606317|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606318|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606319|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606320|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606321|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606322|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606323|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ606324|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130172|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001130173|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161656|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161657|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161658|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161659|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_001161660|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##NM_005375|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##X52125|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##BC064955|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)	0.0	
chr7	100878479	100878552	reg1044577.p1	3.473	+	TSC_hg19_v1_chr7_+_100861461 AF093571 AK312136 U61837 AK125123 AB590267 CR456992 DQ892275 DQ895476	-17085	+	TSC_hg19_v1_chr7_+_100860970 BC017333 NM_006349 BC001877	-17482	+	TSC_hg19_v1_chr7_-_100861046 NM_001084	-17483	-	BC010160 AJ245738 NM_014343	2613	-	AK056103 NM_001185080	3585	-	CU678480 BC003540 BC009428 TSC_hg19_v1_chr7_-_100888363 AF151893	9810	-	AF093571|ZNHIT1|10467|zinc finger, HIT-type containing 1##AK312136|ZNHIT1|10467|zinc finger, HIT-type containing 1##U61837|ZNHIT1|10467|zinc finger, HIT-type containing 1##AK125123|ZNHIT1|10467|zinc finger, HIT-type containing 1##CR456992|ZNHIT1|10467|zinc finger, HIT-type containing 1##DQ892275|ZNHIT1|10467|zinc finger, HIT-type containing 1##DQ895476|ZNHIT1|10467|zinc finger, HIT-type containing 1##BC017333|ZNHIT1|10467|zinc finger, HIT-type containing 1##NM_006349|ZNHIT1|10467|zinc finger, HIT-type containing 1##BC001877|ZNHIT1|10467|zinc finger, HIT-type containing 1##NM_001084|PLOD3|8985|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3##BC010160|CLDN15|24146|claudin 15##AJ245738|CLDN15|24146|claudin 15##NM_014343|CLDN15|24146|claudin 15##AK056103|CLDN15|24146|claudin 15##NM_001185080|CLDN15|24146|claudin 15##BC003540|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##BC009428|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)##AF151893|FIS1|51024|fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)	0.077505	
chr7	120365988	120366059	reg1012079.p2	3.473	+	AK307139 AB028967 NM_012281	-452319	+	NM_019644 AK302407	-2501289	+	NM_016200 TSC_hg19_v1_chr7_+_117824222 BC042464 AK311936 AF182294 BC045532 BC053644 BC022440 BC002742 BC064376	-2541852	+	AY358703 AK312239 TSC_hg19_v1_chr7_-_120498032	131997	-	TSC_hg19_v1_chr7_-_120498144 BC031265 NM_012338	132137	-	AK000096 NM_019071 NM_198267 TSC_hg19_v1_chr7_+_120590832 AF161419 BC009777 BC093091 AY007790 AK291905 AF074968 BC073865 AF180298 BC062634 BC093689 BC101609 BC143316 BC009776 BC010851 BC146417 BC153171 AB463778	224858	+	AB028967|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_012281|KCND2|3751|potassium voltage-gated channel, Shal-related subfamily, member 2##NM_019644|ANKRD7|56311|ankyrin repeat domain 7##AK302407|ANKRD7|56311|ankyrin repeat domain 7##NM_016200|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC042464|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AK311936|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AF182294|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC045532|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC053644|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC022440|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC002742|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##BC064376|NAA38|51691|N(alpha)-acetyltransferase 38, NatC auxiliary subunit##AY358703|TSPAN12|23554|tetraspanin 12##AK312239|TSPAN12|23554|tetraspanin 12##BC031265|TSPAN12|23554|tetraspanin 12##NM_012338|TSPAN12|23554|tetraspanin 12##AK000096|ING3|54556|inhibitor of growth family, member 3##NM_019071|ING3|54556|inhibitor of growth family, member 3##NM_198267|ING3|54556|inhibitor of growth family, member 3##AF161419|ING3|54556|inhibitor of growth family, member 3##BC009777|ING3|54556|inhibitor of growth family, member 3##BC093091|ING3|54556|inhibitor of growth family, member 3##AY007790|ING3|54556|inhibitor of growth family, member 3##AK291905|ING3|54556|inhibitor of growth family, member 3##AF074968|ING3|54556|inhibitor of growth family, member 3##BC073865|ING3|54556|inhibitor of growth family, member 3##AF180298|ING3|54556|inhibitor of growth family, member 3##BC062634|ING3|54556|inhibitor of growth family, member 3##BC093689|ING3|54556|inhibitor of growth family, member 3##BC101609|ING3|54556|inhibitor of growth family, member 3##BC143316|ING3|54556|inhibitor of growth family, member 3##BC009776|ING3|54556|inhibitor of growth family, member 3##BC010851|ING3|54556|inhibitor of growth family, member 3##BC146417|ING3|54556|inhibitor of growth family, member 3##BC153171|ING3|54556|inhibitor of growth family, member 3	0.0	
chr11	106990538	106990604	reg1033698.p1	3.472	+	BC085622 TSC_hg19_v1_chr11_-_106889260 BC130484 BC130488 BC144033 NM_000855 X63282 Z50053	-101483	-	NM_152433 NM_198439	-1042107	-	AF136978 AF151057 AF151838 AF302110 NM_015423 TSC_hg19_v1_chr11_+_105948388 BC016728 AK312529 BC015470 AK293362 AB463408 CU677695 DQ891342 DQ894524	-1042206	+	AK293001 TSC_hg19_v1_chr11_-_107328552 BX649022 BX647832 BC107418 BC070142 BX648704 AK126881 NM_152434	337968	-	AK293603 TSC_hg19_v1_chr11_-_107436464 BC015183 AK304413 AB218768 AK095523 NM_138775	445873	-	TSC_hg19_v1_chr11_+_107461813 AK297351 NM_001130037 NM_018712	471240	+	BC130484|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC130488|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##BC144033|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_000855|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##X63282|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##Z50053|GUCY1A2|2977|guanylate cyclase 1, soluble, alpha 2##NM_152433|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##NM_198439|KBTBD3|143879|kelch repeat and BTB (POZ) domain containing 3##AF136978|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151057|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF151838|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AF302110|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##NM_015423|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC016728|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK312529|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##BC015470|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK293362|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ891342|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##DQ894524|AASDHPPT|60496|aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase##AK293001|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX649022|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX647832|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC107418|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BC070142|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##BX648704|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK126881|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##NM_152434|CWF19L2|143884|CWF19-like 2, cell cycle control (S. pombe)##AK293603|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##BC015183|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK304413|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AB218768|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK095523|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##NM_138775|ALKBH8|91801|alkB, alkylation repair homolog 8 (E. coli)##AK297351|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_001130037|ELMOD1|55531|ELMO/CED-12 domain containing 1##NM_018712|ELMOD1|55531|ELMO/CED-12 domain containing 1	0.0	
chr1	1533160	1533294	reg1034460.p1	3.472	+	TSC_hg19_v1_chr1_-_1510268 NM_014188	-22955	-	TSC_hg19_v1_chr1_-_1510244 BC008070 BC018909	-22996	-	AF161530 TSC_hg19_v1_chr1_-_1510015 AK297505 AK001809 AK310067 AK291324 AJ276409	-23201	-	TSC_hg19_v1_chr1_-_1535470 AB188495 NM_001242659	2246	-	NM_001170686 NM_001170687 NM_001170688 NM_080875 AK302757 AK128553 TSC_hg19_v1_chr1_+_1550895 BC037542 AK122751 AB074480 AB076691 AB076692 AB076693 AK122863 AK123400 BC016490 AB097000	17629	+	TSC_hg19_v1_chr1_-_1551178 BC035078	17894	-	NM_014188|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)##BC008070|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)##BC018909|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)##AF161530|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)##AK297505|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)##AK001809|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)##AK310067|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)##AJ276409|SSU72|29101|SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)##AB188495|LOC643988|643988|uncharacterized LOC643988##NM_001242659|LOC643988|643988|uncharacterized LOC643988##NM_001170686|MIB2|142678|mindbomb homolog 2 (Drosophila)##NM_001170687|MIB2|142678|mindbomb homolog 2 (Drosophila)##NM_001170688|MIB2|142678|mindbomb homolog 2 (Drosophila)##NM_080875|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK302757|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK128553|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC037542|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK122751|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB074480|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB076691|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB076692|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB076693|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK122863|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK123400|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC016490|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB097000|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC035078|MIB2|142678|mindbomb homolog 2 (Drosophila)	0.021789	
chr1	178313730	178313818	reg1031307.p2	3.472	+	AF047711 NM_004841 AK290308	-3140	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-250133	+	TSC_hg19_v1_chr1_+_178063306 BC063442	-250470	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	168492	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	380599	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	526372	-	AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##BC110611|RASAL2|9462|RAS protein activator like 2##BC063442|RASAL2|9462|RAS protein activator like 2##AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1	0.017783	
chr12	123920941	123921051	reg1022394.p1	3.472	+	AY064546 TSC_hg19_v1_chr12_+_123873657	-47367	+	TSC_hg19_v1_chr12_+_123868724 AY102937 AB464199	-52273	+	TSC_hg19_v1_chr12_+_123868678 AK292645 NM_020382	-52341	+	CU680478 DQ892579 DQ895796 TSC_hg19_v1_chr12_-_123921017 AB085763 BC013042	16	-	TSC_hg19_v1_chr12_-_123921232 AK056934 NM_145058	245	-	NM_022717 AK290127 TSC_hg19_v1_chr12_+_123942685 BC047678 BC020829 U44799 BC054034	21707	+	AY064546|SETD8|387893|SET domain containing (lysine methyltransferase) 8##AY102937|SETD8|387893|SET domain containing (lysine methyltransferase) 8##AK292645|SETD8|387893|SET domain containing (lysine methyltransferase) 8##NM_020382|SETD8|387893|SET domain containing (lysine methyltransferase) 8##DQ892579|RILPL2|196383|Rab interacting lysosomal protein-like 2##DQ895796|RILPL2|196383|Rab interacting lysosomal protein-like 2##AB085763|RILPL2|196383|Rab interacting lysosomal protein-like 2##BC013042|RILPL2|196383|Rab interacting lysosomal protein-like 2##AK056934|RILPL2|196383|Rab interacting lysosomal protein-like 2##NM_145058|RILPL2|196383|Rab interacting lysosomal protein-like 2##NM_022717|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##AK290127|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC047678|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##U44799|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)##BC054034|SNRNP35|11066|small nuclear ribonucleoprotein 35kDa (U11/U12)	0.0	
chr14	23314149	23314265	reg1046727.p1	3.472	+	Z48481 TSC_hg19_v1_chr14_+_23305913 D26512 X90925 AB385035 CU687944 U41078	-8238	+	X83535 TSC_hg19_v1_chr14_+_23305909	-8298	+	TSC_hg19_v1_chr14_+_23305816 BC039581	-8371	+	TSC_hg19_v1_chr14_+_23340981 NM_014045 AY358399 BX161500	26814	+	TSC_hg19_v1_chr14_+_23341364 AL834518 AK291030 BC113714 BC113716	27215	+	AK299238 AK096283 NM_173527 BC035663	38228	+	Z48481|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##D26512|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##X90925|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##U41078|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##X83535|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##NM_014045|LRP10|26020|low density lipoprotein receptor-related protein 10##AY358399|LRP10|26020|low density lipoprotein receptor-related protein 10##BX161500|LRP10|26020|low density lipoprotein receptor-related protein 10##AL834518|LRP10|26020|low density lipoprotein receptor-related protein 10##AK291030|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113714|LRP10|26020|low density lipoprotein receptor-related protein 10##BC113716|LRP10|26020|low density lipoprotein receptor-related protein 10##AK299238|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##AK096283|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##NM_173527|REM2|161253|RAS (RAD and GEM)-like GTP binding 2##BC035663|REM2|161253|RAS (RAD and GEM)-like GTP binding 2	0.0	
chr1	48085071	48085148	reg1041875.p1	3.472	+	AF042832 NM_004474	-183421	+	AF275722 NM_012186	-203366	+	TSC_hg19_v1_chr1_+_47799646 AF259961	-285468	+	NM_001194986	377452	-	BC104857 BC104863 BC143570 BC143587 NM_001011547 NM_001135181 BC143572 TSC_hg19_v1_chr1_+_48688387 BC048332 AK131200 BX648549 AK296133	603283	+	TSC_hg19_v1_chr1_-_48937679 CU676616 DQ892001 DQ895191 BC020660	852569	-	AF042832|FOXD2|2306|forkhead box D2##NM_004474|FOXD2|2306|forkhead box D2##AF275722|FOXE3|2301|forkhead box E3##NM_012186|FOXE3|2301|forkhead box E3##AF259961|CMPK1|51727|cytidine monophosphate (UMP-CMP) kinase 1, cytosolic##NM_001194986|LOC388630|388630|UPF0632 protein A##BC104857|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC104863|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143570|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143587|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001011547|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##NM_001135181|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC143572|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BC048332|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK131200|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##BX648549|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##AK296133|SLC5A9|200010|solute carrier family 5 (sodium/glucose cotransporter), member 9##DQ892001|SPATA6|54558|spermatogenesis associated 6##DQ895191|SPATA6|54558|spermatogenesis associated 6##BC020660|SPATA6|54558|spermatogenesis associated 6	0.0	
chr19	495750	495851	reg1037655.p1	3.472	+	BC104469 BC104468 AK097378 NM_182577	-20872	-	NM_012435 TSC_hg19_v1_chr19_-_461034	-34784	-	AB075837 NM_001136263 TSC_hg19_v1_chr19_-_409199	-86616	-	BC136408 BC137506 BC137507 BC144065 NM_130760 NM_130762 U82483 BC142629 AB590859 AY732484 AY819760 DQ076657 U43628	676	+	TSC_hg19_v1_chr19_+_507499 AK126170 NM_033513 AK125401 AB463513 BC009520	11742	+	TSC_hg19_v1_chr19_+_531720 BC018143 AK291554 BC009850 NM_004359	35911	+	BC104469|ODF3L2|284451|outer dense fiber of sperm tails 3-like 2##BC104468|ODF3L2|284451|outer dense fiber of sperm tails 3-like 2##AK097378|ODF3L2|284451|outer dense fiber of sperm tails 3-like 2##NM_182577|ODF3L2|284451|outer dense fiber of sperm tails 3-like 2##NM_012435|SHC2|25759|SHC (Src homology 2 domain containing) transforming protein 2##AB075837|C2CD4C|126567|C2 calcium-dependent domain containing 4C##NM_001136263|C2CD4C|126567|C2 calcium-dependent domain containing 4C##BC136408|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC137506|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC137507|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC144065|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##NM_130760|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##NM_130762|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##U82483|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##BC142629|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##AY732484|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##AY819760|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##DQ076657|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##U43628|MADCAM1|8174|mucosal vascular addressin cell adhesion molecule 1##AK126170|TPGS1|91978|tubulin polyglutamylase complex subunit 1##NM_033513|TPGS1|91978|tubulin polyglutamylase complex subunit 1##BC009520|TPGS1|91978|tubulin polyglutamylase complex subunit 1##BC018143|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##AK291554|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##BC009850|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)##NM_004359|CDC34|997|cell division cycle 34 homolog (S. cerevisiae)	0.0	
chr19	860585	860691	reg1038115.p1	3.472	+	TSC_hg19_v1_chr19_+_859675 AB590861 AJ313463 DQ884409 M84526 BC051001	-943	+	TSC_hg19_v1_chr19_+_859663 BC057807 AK300963 NM_001928	-977	+	M34379 NM_001972 X05875 BC074816 BC074817 TSC_hg19_v1_chr19_+_852302	-8341	+	BC034529 BC040146 TSC_hg19_v1_chr19_+_860648 CR536575	3	+	TSC_hg19_v1_chr19_-_893188 BC004554 BC011841 BC017282 AF106934	32561	-	TSC_hg19_v1_chr19_-_893218 NM_005481	32579	-	AJ313463|CFD|1675|complement factor D (adipsin)##DQ884409|CFD|1675|complement factor D (adipsin)##M84526|CFD|1675|complement factor D (adipsin)##BC051001|CFD|1675|complement factor D (adipsin)##BC057807|CFD|1675|complement factor D (adipsin)##AK300963|CFD|1675|complement factor D (adipsin)##NM_001928|CFD|1675|complement factor D (adipsin)##M34379|ELANE|1991|elastase, neutrophil expressed##NM_001972|ELANE|1991|elastase, neutrophil expressed##X05875|ELANE|1991|elastase, neutrophil expressed##BC074816|ELANE|1991|elastase, neutrophil expressed##BC074817|ELANE|1991|elastase, neutrophil expressed##BC034529|CFD|1675|complement factor D (adipsin)##BC040146|CFD|1675|complement factor D (adipsin)##CR536575|CFD|1675|complement factor D (adipsin)##BC004554|MED16|10025|mediator complex subunit 16##BC011841|MED16|10025|mediator complex subunit 16##BC017282|MED16|10025|mediator complex subunit 16##AF106934|MED16|10025|mediator complex subunit 16##NM_005481|MED16|10025|mediator complex subunit 16	0.011103	
chr2	135497640	135497739	reg1037379.p2	3.472	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	-21133	-	NM_002410 D17716 AF113921	-485804	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-1171651	-	AK125008 NM_138326 BC016018 BC107420 AB071418	98529	+	TSC_hg19_v1_chr2_+_135676397 AK294889 NM_001241 NM_058241 AF048731 AK292913 BC114366	178708	+	TSC_hg19_v1_chr2_+_135676409 AF048732	178730	+	BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AK294889|CCNT2|905|cyclin T2##NM_001241|CCNT2|905|cyclin T2##NM_058241|CCNT2|905|cyclin T2##AF048731|CCNT2|905|cyclin T2##AK292913|CCNT2|905|cyclin T2##BC114366|CCNT2|905|cyclin T2##AF048732|CCNT2|905|cyclin T2	0.0	
chr4	140613651	140613755	reg1033620.p1	3.472	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	-26569	+	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	-26713	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-136270	-	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	460635	-	NM_018717 TSC_hg19_v1_chr4_-_141075339	461629	-	AK027797 NM_032547	564736	+	AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)##NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)##AK027797|SCOC|60592|short coiled-coil protein##NM_032547|SCOC|60592|short coiled-coil protein	0.0	
chr4	183839096	183839188	reg1036886.p1	3.472	+	TSC_hg19_v1_chr4_-_183838615 NM_001012732 NM_001921	-508	-	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	-612	-	NM_001080477 HE578284 HE578285	-593988	+	TSC_hg19_v1_chr4_+_184020431 NM_024949	181336	+	NM_001111319	402784	-	NM_001185149	404436	-	NM_001012732|DCTD|1635|dCMP deaminase##NM_001921|DCTD|1635|dCMP deaminase##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_024949|WWC2|80014|WW and C2 domain containing 2##NM_001111319|CLDN22|53842|claudin 22##NM_001185149|CLDN24|100132463|claudin 24	0.0	
chr5	168692980	168693123	reg1035013.p1	3.472	+	TSC_hg19_v1_chr5_-_168271862 BC023515	-421192	-	TSC_hg19_v1_chr5_-_168006609 BC013705 NM_024594	-686536	-	TSC_hg19_v1_chr5_-_168006352 AK223285 AK022961	-686700	-	AB383998 AK310549 TSC_hg19_v1_chr5_-_168728144 BC142665 BC142717 AY358884 AB017169 BC098388 AB011538 BC146759 NM_003062	34907	-	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	317670	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	371193	+	BC013705|PANK3|79646|pantothenate kinase 3##NM_024594|PANK3|79646|pantothenate kinase 3##AK223285|PANK3|79646|pantothenate kinase 3##AK022961|PANK3|79646|pantothenate kinase 3##AK310549|SLIT3|6586|slit homolog 3 (Drosophila)##BC142665|SLIT3|6586|slit homolog 3 (Drosophila)##BC142717|SLIT3|6586|slit homolog 3 (Drosophila)##AY358884|SLIT3|6586|slit homolog 3 (Drosophila)##AB017169|SLIT3|6586|slit homolog 3 (Drosophila)##BC098388|SLIT3|6586|slit homolog 3 (Drosophila)##AB011538|SLIT3|6586|slit homolog 3 (Drosophila)##BC146759|SLIT3|6586|slit homolog 3 (Drosophila)##NM_003062|SLIT3|6586|slit homolog 3 (Drosophila)##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##NM_004946|DOCK2|1794|dedicator of cytokinesis 2	0.667231	CTCF.p2:17:0.667
chr7	43966188	43966308	reg1041052.p1	3.472	+	TSC_hg19_v1_chr7_+_43966046 NM_015983 BC004104 AK001446 AF125045 AB528947 CU678576	-179	+	TSC_hg19_v1_chr7_-_43966000 NM_001077664 AK302459	-271	-	TSC_hg19_v1_chr7_-_43946217 CR749398 NM_001077663 NM_001204871 NM_017920	-19918	-	AF412027 NM_175064	74239	+	TSC_hg19_v1_chr7_-_44058749 BC062722 BX537878 BX538054 BC017341 BC017250 BC105584 AK296066	92529	-	TSC_hg19_v1_chr7_+_44078680 BC081571 BC024303	112501	+	NM_015983|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##BC004104|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##AK001446|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##AF125045|UBE2D4|51619|ubiquitin-conjugating enzyme E2D 4 (putative)##NM_001077664|URGCP|55665|upregulator of cell proliferation##AK302459|URGCP|55665|upregulator of cell proliferation##CR749398|URGCP|55665|upregulator of cell proliferation##NM_001077663|URGCP|55665|upregulator of cell proliferation##NM_001204871|URGCP-MRPS24|100534592|URGCP-MRPS24 readthrough##NM_017920|URGCP|55665|upregulator of cell proliferation##AF412027|SPDYE1|285955|speedy homolog E1 (Xenopus laevis)##NM_175064|SPDYE1|285955|speedy homolog E1 (Xenopus laevis)##BC062722|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BX537878|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BX538054|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC017341|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC017250|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC105584|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##AK296066|POLR2J4|84820|polymerase (RNA) II (DNA directed) polypeptide J4, pseudogene##BC081571|FLJ35390|255031|uncharacterized LOC255031##BC024303|FLJ35390|255031|uncharacterized LOC255031	0.0	
chr7	74154460	74154579	reg1036274.p1	3.472	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	-82397	+	TSC_hg19_v1_chr7_+_74072046 BC070484	-82475	+	AK292832 TSC_hg19_v1_chr7_+_74072028 AF015553 NM_001163636 NM_001518 NM_032999 NM_033000 NM_033001	-82498	+	BC002816 NM_000265 BC065731 AK127905 AK223217 AK292094 AK316341 AK316552 AB590366 CU678218 DQ893150 DQ896445 U25793	33833	+	AY260739 AY312853 AY336980 BC047706 BC061590 AK225845 AY336979 BC136849 BC067859 AK291431 AY336981 BC038098 NM_173537 AK098269	113320	-	TSC_hg19_v1_chr7_-_74306679 BC002581	152156	-	BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##AK292832|GTF2I|2969|general transcription factor IIi##AF015553|GTF2I|2969|general transcription factor IIi##NM_001163636|GTF2I|2969|general transcription factor IIi##NM_001518|GTF2I|2969|general transcription factor IIi##NM_032999|GTF2I|2969|general transcription factor IIi##NM_033000|GTF2I|2969|general transcription factor IIi##NM_033001|GTF2I|2969|general transcription factor IIi##BC002816|NCF1|653361|neutrophil cytosolic factor 1##NM_000265|NCF1|653361|neutrophil cytosolic factor 1##BC065731|NCF1|653361|neutrophil cytosolic factor 1##AK127905|NCF1|653361|neutrophil cytosolic factor 1##AK223217|NCF1|653361|neutrophil cytosolic factor 1##AK292094|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316341|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316552|NCF1|653361|neutrophil cytosolic factor 1##DQ893150|NCF1|653361|neutrophil cytosolic factor 1##DQ896445|NCF1|653361|neutrophil cytosolic factor 1##U25793|NCF1|653361|neutrophil cytosolic factor 1##AY260739|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336980|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC047706|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC061590|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336979|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AY336981|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC038098|GTF2IRD2|84163|GTF2I repeat domain containing 2##NM_173537|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC002581|STAG3L2|442582|stromal antigen 3-like 2	0.324006	CTCF.p2:-12:0.324
chrX	18874676	18874789	reg1024968.p2	3.472	+	NM_006240 NM_152224 NM_152226 X97867 AK292235 BC036026	-165688	+	AB464151 AF014459 DQ426892 NM_000330	-184528	-	BC036091 NM_001037343	-414389	+	TSC_hg19_v1_chrX_-_19002476 NM_000292	127730	-	BC099901 X81892 AK291012 TSC_hg19_v1_chrX_-_19140680 AF538954 AF539455 AF539456 AY143364 AY143365 AY143366 AY143367 AY148343 BC063315 NM_001079858 NM_001079859 NM_001079860 NM_001184833 NM_001184834 NM_001184835 NM_001184836 NM_001184837 NM_005756	265935	-	NM_000284 NM_001173454 NM_001173455 NM_001173456 TSC_hg19_v1_chrX_+_19362044 AK293250 AK296341 AK312263 AK222988 L13318 L48690 AK129887 AK222740 J03503 AK296457 BC002406 X52710 X52709 J03575 M24848 DQ891865 DQ895054 DQ895057	487350	+	NM_006240|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152224|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##NM_152226|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##X97867|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AK292235|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##BC036026|PPEF1|5475|protein phosphatase, EF-hand calcium binding domain 1##AF014459|RS1|6247|retinoschisin 1##DQ426892|RS1|6247|retinoschisin 1##NM_000330|RS1|6247|retinoschisin 1##BC036091|CDKL5|6792|cyclin-dependent kinase-like 5##NM_001037343|CDKL5|6792|cyclin-dependent kinase-like 5##NM_000292|PHKA2|5256|phosphorylase kinase, alpha 2 (liver)##BC099901|GPR64|10149|G protein-coupled receptor 64##X81892|GPR64|10149|G protein-coupled receptor 64##AK291012|GPR64|10149|G protein-coupled receptor 64##AF538954|GPR64|10149|G protein-coupled receptor 64##AF539455|GPR64|10149|G protein-coupled receptor 64##AF539456|GPR64|10149|G protein-coupled receptor 64##AY143364|GPR64|10149|G protein-coupled receptor 64##AY143365|GPR64|10149|G protein-coupled receptor 64##AY143366|GPR64|10149|G protein-coupled receptor 64##AY143367|GPR64|10149|G protein-coupled receptor 64##AY148343|GPR64|10149|G protein-coupled receptor 64##BC063315|GPR64|10149|G protein-coupled receptor 64##NM_001079858|GPR64|10149|G protein-coupled receptor 64##NM_001079859|GPR64|10149|G protein-coupled receptor 64##NM_001079860|GPR64|10149|G protein-coupled receptor 64##NM_001184833|GPR64|10149|G protein-coupled receptor 64##NM_001184834|GPR64|10149|G protein-coupled receptor 64##NM_001184835|GPR64|10149|G protein-coupled receptor 64##NM_001184836|GPR64|10149|G protein-coupled receptor 64##NM_001184837|GPR64|10149|G protein-coupled receptor 64##NM_005756|GPR64|10149|G protein-coupled receptor 64##NM_000284|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173454|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173455|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##NM_001173456|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK293250|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296341|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK312263|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222988|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L13318|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##L48690|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK129887|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK222740|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03503|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##AK296457|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##BC002406|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52710|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##X52709|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##J03575|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##M24848|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ891865|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895054|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1##DQ895057|PDHA1|5160|pyruvate dehydrogenase (lipoamide) alpha 1	0.0	
chrX	30507579	30507690	reg1037445.p1	3.472	+	HQ692832 AB464646 BC011564 NM_000475	-180148	-	NM_177404 BC013772	-242338	+	AK314977 NM_002363 NM_177415 X82539	-245787	+	TSC_hg19_v1_chrX_-_30595884 AK021639 BC020611 NM_025159	88323	-	TSC_hg19_v1_chrX_+_30671493 BC042421 BC071595 NM_000167 NM_001128127 NM_001205019 NM_203391	163860	+	TSC_hg19_v1_chrX_+_30671539 AK313215	163908	+	HQ692832|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##BC011564|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_000475|NR0B1|190|nuclear receptor subfamily 0, group B, member 1##NM_177404|MAGEB1|4112|melanoma antigen family B, 1##BC013772|MAGEB1|4112|melanoma antigen family B, 1##AK314977|MAGEB1|4112|melanoma antigen family B, 1##NM_002363|MAGEB1|4112|melanoma antigen family B, 1##NM_177415|MAGEB1|4112|melanoma antigen family B, 1##X82539|MAGEB1|4112|melanoma antigen family B, 1##AK021639|CXorf21|80231|chromosome X open reading frame 21##BC020611|CXorf21|80231|chromosome X open reading frame 21##NM_025159|CXorf21|80231|chromosome X open reading frame 21##BC042421|GK|2710|glycerol kinase##BC071595|GK|2710|glycerol kinase##NM_000167|GK|2710|glycerol kinase##NM_001128127|GK|2710|glycerol kinase##NM_001205019|GK|2710|glycerol kinase##NM_203391|GK|2710|glycerol kinase##AK313215|GK|2710|glycerol kinase	0.0	
chr10	73069385	73069451	reg1035266.p1	3.471	+	TSC_hg19_v1_chr10_+_72972326 AK128132 NM_001244889 NM_170744 AY358351 AB096256	-97038	+	NM_000281	-420878	-	TSC_hg19_v1_chr10_-_72648321 BC006324 L41559 AF082858	-421116	-	AX775915 AX775917 AX775919 AX775921 NM_001174098 NM_018344 TSC_hg19_v1_chr10_+_73079015 AK316152 AY358686 BC120996 BC120997 AK304503 BC050589 AK314497	9607	+	BC063019 TSC_hg19_v1_chr10_+_73079044 AY288928	9628	+	TSC_hg19_v1_chr10_+_73156683 BC011570 NM_001171930 NM_001171931 NM_001171932 NM_022124 NM_052836 BC032581 BC139903 BC108254 BC065284 BC136976 BC136977	87320	+	AK128132|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_001244889|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_170744|UNC5B|219699|unc-5 homolog B (C. elegans)##AY358351|UNC5B|219699|unc-5 homolog B (C. elegans)##AB096256|UNC5B|219699|unc-5 homolog B (C. elegans)##NM_000281|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##BC006324|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##L41559|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AF082858|PCBD1|5092|pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha##AX775915|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775917|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775919|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AX775921|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_001174098|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##NM_018344|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK316152|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY358686|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120996|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC120997|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK304503|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC050589|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AK314497|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC063019|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##AY288928|SLC29A3|55315|solute carrier family 29 (nucleoside transporters), member 3##BC011570|CDH23|64072|cadherin-related 23##NM_001171930|CDH23|64072|cadherin-related 23##NM_001171931|CDH23|64072|cadherin-related 23##NM_001171932|CDH23|64072|cadherin-related 23##NM_022124|CDH23|64072|cadherin-related 23##NM_052836|CDH23|64072|cadherin-related 23##BC032581|CDH23|64072|cadherin-related 23##BC139903|CDH23|64072|cadherin-related 23##BC108254|CDH23|64072|cadherin-related 23##BC065284|CDH23|64072|cadherin-related 23##BC136976|CDH23|64072|cadherin-related 23##BC136977|CDH23|64072|cadherin-related 23	0.0	
chr11	74459576	74459687	reg1032627.p2	3.471	+	BC142623 TSC_hg19_v1_chr11_-_74442472	-17178	-	NM_015424 AK304519 AY358522 AY279090 AY279091	-17426	-	AK302677 AK316370 D26018 NM_006591 TSC_hg19_v1_chr11_+_74303654 BC092454 AK316301 BC108908 BC108909 BC032636 BC058840 BC041703 AB383722	-155968	+	TSC_hg19_v1_chr11_+_74459915 AB082522 NM_001098638	277	+	TSC_hg19_v1_chr11_-_74660137 AK056364	200493	-	TSC_hg19_v1_chr11_-_74660150 BC064584 BC037294 BC040541	200525	-	BC142623|CHRDL2|25884|chordin-like 2##NM_015424|CHRDL2|25884|chordin-like 2##AK304519|CHRDL2|25884|chordin-like 2##AY358522|CHRDL2|25884|chordin-like 2##AY279090|CHRDL2|25884|chordin-like 2##AY279091|CHRDL2|25884|chordin-like 2##AK302677|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316370|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##D26018|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##NM_006591|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC092454|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AK316301|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108908|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC108909|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC032636|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC058840|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##BC041703|POLD3|10714|polymerase (DNA-directed), delta 3, accessory subunit##AB082522|RNF169|254225|ring finger protein 169##NM_001098638|RNF169|254225|ring finger protein 169##AK056364|XRRA1|143570|X-ray radiation resistance associated 1##BC064584|XRRA1|143570|X-ray radiation resistance associated 1##BC037294|XRRA1|143570|X-ray radiation resistance associated 1##BC040541|XRRA1|143570|X-ray radiation resistance associated 1	0.0	
chr12	48577138	48577280	reg1036071.p1	3.471	+	TSC_hg19_v1_chr12_-_48551274 AF464877 AK024908 BC001321 AK297013 AK289957 NM_024095	-25887	-	D21861 NM_001166687 NM_001166688 Y00698 BC000534 BC012799 BC013298 AB463168 CU674264 CU676868 BC007798	-60714	+	NM_000289 D21862 TSC_hg19_v1_chr12_+_48513146 M26066 U24183 AK312284 BC021203	-64123	+	NM_001013635 AK056003 BC036801 TSC_hg19_v1_chr12_+_48577419 BC049387	196	+	TSC_hg19_v1_chr12_+_48592139 AK125945 CR749551	14945	+	AB587540 NM_001004134 BC136757 BC136758	19912	-	AF464877|ASB8|140461|ankyrin repeat and SOCS box containing 8##AK024908|ASB8|140461|ankyrin repeat and SOCS box containing 8##BC001321|ASB8|140461|ankyrin repeat and SOCS box containing 8##AK297013|ASB8|140461|ankyrin repeat and SOCS box containing 8##AK289957|ASB8|140461|ankyrin repeat and SOCS box containing 8##NM_024095|ASB8|140461|ankyrin repeat and SOCS box containing 8##D21861|PFKM|5213|phosphofructokinase, muscle##NM_001166687|PFKM|5213|phosphofructokinase, muscle##NM_001166688|PFKM|5213|phosphofructokinase, muscle##Y00698|PFKM|5213|phosphofructokinase, muscle##BC000534|PFKM|5213|phosphofructokinase, muscle##BC012799|PFKM|5213|phosphofructokinase, muscle##BC013298|PFKM|5213|phosphofructokinase, muscle##BC007798|PFKM|5213|phosphofructokinase, muscle##NM_000289|PFKM|5213|phosphofructokinase, muscle##M26066|PFKM|5213|phosphofructokinase, muscle##U24183|PFKM|5213|phosphofructokinase, muscle##AK312284|PFKM|5213|phosphofructokinase, muscle##BC021203|PFKM|5213|phosphofructokinase, muscle##NM_001013635|C12orf68|387856|chromosome 12 open reading frame 68##AK056003|C12orf68|387856|chromosome 12 open reading frame 68##BC036801|C12orf68|387856|chromosome 12 open reading frame 68##BC049387|C12orf68|387856|chromosome 12 open reading frame 68##AK125945|DKFZP779L1853|643162|uncharacterized LOC643162##CR749551|DKFZP779L1853|643162|uncharacterized LOC643162##NM_001004134|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1##BC136757|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1##BC136758|OR10AD1|121275|olfactory receptor, family 10, subfamily AD, member 1	0.0	
chr13	98462582	98462673	reg1042869.p1	3.471	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	-375925	+	TSC_hg19_v1_chr13_+_98086350 AK315139 NM_021033 BC041333	-376190	+	TSC_hg19_v1_chr13_+_97999294 AF339832	-463333	+	NM_002271 BC045640	143310	+	TSC_hg19_v1_chr13_+_98628928 BX648222 AK303494 AK225286 BC001497 BC019309 DQ893033 EU176755 U72761	166205	+	TSC_hg19_v1_chr13_+_98795412 NM_001001715 NM_005766	332794	+	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family##AK315139|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_021033|RAP2A|5911|RAP2A, member of RAS oncogene family##BC041333|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_002271|IPO5|3843|importin 5##BC045640|IPO5|3843|importin 5##BX648222|IPO5|3843|importin 5##AK303494|IPO5|3843|importin 5##AK225286|IPO5|3843|importin 5##BC001497|IPO5|3843|importin 5##BC019309|IPO5|3843|importin 5##DQ893033|IPO5|3843|importin 5##EU176755|IPO5|3843|importin 5##U72761|IPO5|3843|importin 5##NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	0.605605	CTCF.p2:-21:0.606
chr16	68057125	68057203	reg1037677.p1	3.471	+	TSC_hg19_v1_chr16_-_68057129 BC014517	-36	-	TSC_hg19_v1_chr16_-_68057115 BC024273	-56	-	AJ295149 NM_022355	-23805	-	AK290578 TSC_hg19_v1_chr16_+_68057186 AB101210 AK296663 AK000406 BC006527 NM_017803	11	+	NM_018380	605	-	TSC_hg19_v1_chr16_+_68119279 NM_004555 NM_173163 NM_173165	62090	+	BC014517|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##BC024273|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##AJ295149|DPEP2|64174|dipeptidase 2##NM_022355|DPEP2|64174|dipeptidase 2##AK290578|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AB101210|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK296663|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK000406|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC006527|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##NM_017803|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##NM_018380|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##NM_004555|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173163|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173165|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	0.0	
chr20	34188977	34189063	reg1010316.p1	3.471	+	TSC_hg19_v1_chr20_+_34129833 CU679479 CU680742 AF091085	-59175	+	AK074550 BC009765 TSC_hg19_v1_chr20_+_34129829 AK096484 AK300916	-59190	+	NM_015966 NM_198398 TSC_hg19_v1_chr20_+_34129827 AF308298 AF077030 AF151812 EF206690 BC014014	-59218	+	BC029951 AY461812 TSC_hg19_v1_chr20_-_34195432	6402	-	TSC_hg19_v1_chr20_+_34203752 AF262992 NM_003116 BC143783 AB464242	14815	+	NM_003915	52810	-	AF091085|ERGIC3|51614|ERGIC and golgi 3##AK074550|ERGIC3|51614|ERGIC and golgi 3##BC009765|ERGIC3|51614|ERGIC and golgi 3##AK096484|ERGIC3|51614|ERGIC and golgi 3##AK300916|ERGIC3|51614|ERGIC and golgi 3##NM_015966|ERGIC3|51614|ERGIC and golgi 3##NM_198398|ERGIC3|51614|ERGIC and golgi 3##AF308298|ERGIC3|51614|ERGIC and golgi 3##AF077030|ERGIC3|51614|ERGIC and golgi 3##AF151812|ERGIC3|51614|ERGIC and golgi 3##EF206690|ERGIC3|51614|ERGIC and golgi 3##BC014014|ERGIC3|51614|ERGIC and golgi 3##BC029951|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene##AY461812|FER1L4|80307|fer-1-like 4 (C. elegans) pseudogene##AF262992|SPAG4|6676|sperm associated antigen 4##NM_003116|SPAG4|6676|sperm associated antigen 4##BC143783|SPAG4|6676|sperm associated antigen 4##NM_003915|CPNE1|8904|copine I	0.0	
chr3	27638064	27638216	reg1034854.p2	3.471	+	TSC_hg19_v1_chr3_-_27525893 AK309734	-112210	-	TSC_hg19_v1_chr3_-_27525833 EU499349 EU934246 EU934247 EU934248 EU934249 EU934250 FJ178574 FJ178575 FJ178576 GU354307 GU354308 GU354309 GU354310	-112315	-	AF047033 AF089726 NM_003615	-139896	-	AB031038 BC131712 NM_005442 AB463608 BC037568	125653	-	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	126061	-	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	644958	+	AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU499349|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934246|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934247|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934248|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934249|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##EU934250|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178574|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178575|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##FJ178576|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354307|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354308|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354309|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##GU354310|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF047033|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AF089726|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##NM_003615|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)	0.0	
chr7	105028285	105028402	reg1040561.p2	3.471	+	BC035214 TSC_hg19_v1_chr7_-_104909496 U88666 NM_182691	-118860	-	TSC_hg19_v1_chr7_+_104752313 AY222296 AY438698	-275965	+	TSC_hg19_v1_chr7_+_104681423 AY157990	-346929	+	TSC_hg19_v1_chr7_-_105029265 AB489157	922	-	TSC_hg19_v1_chr7_-_105029346 NM_182692	999	-	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	134318	-	BC035214|SRPK2|6733|SRSF protein kinase 2##U88666|SRPK2|6733|SRSF protein kinase 2##NM_182691|SRPK2|6733|SRSF protein kinase 2##AY222296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY438698|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY157990|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##NM_182692|SRPK2|6733|SRSF protein kinase 2##BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	0.0	
chr7	17570983	17571164	reg1002854.p2	3.471	+	TSC_hg19_v1_chr7_+_17382906 BC021696	-188167	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	-232804	+	AY359065 BC058284 NM_176813	-649469	-	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	408976	-	TSC_hg19_v1_chr7_-_17980118 AL353943 AK315135 AK294582 NM_015132	409054	-	BC062797 BC005309 M57423 NM_175886	496392	-	BC021696|AHR|196|aryl hydrocarbon receptor##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13##AL353943|SNX13|23161|sorting nexin 13##AK315135|SNX13|23161|sorting nexin 13##AK294582|SNX13|23161|sorting nexin 13##NM_015132|SNX13|23161|sorting nexin 13##BC062797|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##BC005309|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##M57423|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1##NM_175886|PRPS1L1|221823|phosphoribosyl pyrophosphate synthetase 1-like 1	0.0	
chr9	2017113	2017179	reg1033357.p3	3.471	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-1850	+	AF130729 NM_181872	-966537	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-966776	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	604661	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	604928	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	604966	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.0	
chr9	32573043	32573223	reg1008758.p3	3.471	+	CR456920 TSC_hg19_v1_chr9_-_32573139 AF035840 BC029247 AK289702 AF067167 BC009801 NM_001199987 NM_002493 NM_182739	-11	-	TSC_hg19_v1_chr9_-_32552585 NM_001195622 NM_005802	-20531	-	AB045732 AB045733 AF098300 TSC_hg19_v1_chr9_-_32552567 BC060884	-20574	-	BC116181 BC116182 AF390562 NM_153809	62507	-	AK125320 NM_212558 BX647550	210383	+	AY208839 AY208836 AY208835 AY208833 NM_001195249 AK131046 AB528955 TSC_hg19_v1_chr9_-_33001627 AY208831 AY208837 AY208834 NM_001195254 AY040777 AY208829 AY208832 BC068107 AY208840 AJ565850 AJ565851 AJ565852 BX538161 AK055672 AY208830 NM_001195248 NM_001195250 NM_001195251 NM_001195252 NM_175069 NM_175073	428445	-	CR456920|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AF035840|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC029247|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AK289702|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##AF067167|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##BC009801|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_001199987|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_002493|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_182739|NDUFB6|4712|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa##NM_001195622|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##NM_005802|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AB045732|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AB045733|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##AF098300|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##BC060884|TOPORS|10210|topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase##BC116181|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##BC116182|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##AF390562|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##NM_153809|TAF1L|138474|TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like##AK125320|TMEM215|401498|transmembrane protein 215##NM_212558|TMEM215|401498|transmembrane protein 215##BX647550|TMEM215|401498|transmembrane protein 215##AY208839|APTX|54840|aprataxin##AY208836|APTX|54840|aprataxin##AY208835|APTX|54840|aprataxin##AY208833|APTX|54840|aprataxin##NM_001195249|APTX|54840|aprataxin##AK131046|APTX|54840|aprataxin##AY208831|APTX|54840|aprataxin##AY208837|APTX|54840|aprataxin##AY208834|APTX|54840|aprataxin##NM_001195254|APTX|54840|aprataxin##AY040777|APTX|54840|aprataxin##AY208829|APTX|54840|aprataxin##AY208832|APTX|54840|aprataxin##BC068107|APTX|54840|aprataxin##AY208840|APTX|54840|aprataxin##AJ565850|APTX|54840|aprataxin##AJ565851|APTX|54840|aprataxin##AJ565852|APTX|54840|aprataxin##BX538161|APTX|54840|aprataxin##AK055672|APTX|54840|aprataxin##AY208830|APTX|54840|aprataxin##NM_001195248|APTX|54840|aprataxin##NM_001195250|APTX|54840|aprataxin##NM_001195251|APTX|54840|aprataxin##NM_001195252|APTX|54840|aprataxin##NM_175069|APTX|54840|aprataxin##NM_175073|APTX|54840|aprataxin	0.0	
chr9	85949427	85949519	reg1005411.p2	3.471	+	BC037253 NM_001244961	-2598	-	GQ129452 BC023560 NM_001244962	-67326	-	BC023566 NM_152573 TSC_hg19_v1_chr9_-_85678058 AK056176	-271407	-	NM_001244960 AY137774	133186	-	AK094281 EF560742 TSC_hg19_v1_chr9_-_86153270 AK297722 AK223597 NM_001244959 NM_174938 BC041376	203732	-	BC142991 BC036421 BC045782 TSC_hg19_v1_chr9_+_86238057 NM_001001551 NM_001190727 AY615889	288507	+	BC037253|FRMD3|257019|FERM domain containing 3##NM_001244961|FRMD3|257019|FERM domain containing 3##GQ129452|FRMD3|257019|FERM domain containing 3##BC023560|FRMD3|257019|FERM domain containing 3##NM_001244962|FRMD3|257019|FERM domain containing 3##BC023566|RASEF|158158|RAS and EF-hand domain containing##NM_152573|RASEF|158158|RAS and EF-hand domain containing##AK056176|RASEF|158158|RAS and EF-hand domain containing##NM_001244960|FRMD3|257019|FERM domain containing 3##AY137774|FRMD3|257019|FERM domain containing 3##AK094281|FRMD3|257019|FERM domain containing 3##EF560742|FRMD3|257019|FERM domain containing 3##AK297722|FRMD3|257019|FERM domain containing 3##AK223597|FRMD3|257019|FERM domain containing 3##NM_001244959|FRMD3|257019|FERM domain containing 3##NM_174938|FRMD3|257019|FERM domain containing 3##BC041376|FRMD3|257019|FERM domain containing 3##BC142991|C9orf103|414328|chromosome 9 open reading frame 103##BC036421|C9orf103|414328|chromosome 9 open reading frame 103##BC045782|C9orf103|414328|chromosome 9 open reading frame 103##NM_001001551|C9orf103|414328|chromosome 9 open reading frame 103##NM_001190727|C9orf103|414328|chromosome 9 open reading frame 103##AY615889|C9orf103|414328|chromosome 9 open reading frame 103	0.0	
chrX	118800198	118800368	reg1033589.p1	3.471	+	BC047878 BC068514 BC040379 AY208891 NM_001173487 NM_017544	-60455	-	EF165090 EF165091 EF165093 AJ011812 EF158333 EF216688 EF216689 NM_001173488	-73301	-	BC042021 NM_181777	-85986	+	D50918 AB384441 CU679289 CU680116 CU690318 TSC_hg19_v1_chrX_-_118827108 BC069231	26802	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	26849	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	26896	-	BC047878|NKRF|55922|NFKB repressing factor##BC068514|NKRF|55922|NFKB repressing factor##BC040379|NKRF|55922|NFKB repressing factor##AY208891|NKRF|55922|NFKB repressing factor##NM_001173487|NKRF|55922|NFKB repressing factor##NM_017544|NKRF|55922|NFKB repressing factor##EF165090|NKRF|55922|NFKB repressing factor##EF165091|NKRF|55922|NFKB repressing factor##EF165093|NKRF|55922|NFKB repressing factor##AJ011812|NKRF|55922|NFKB repressing factor##EF158333|NKRF|55922|NFKB repressing factor##EF216688|NKRF|55922|NFKB repressing factor##EF216689|NKRF|55922|NFKB repressing factor##NM_001173488|NKRF|55922|NFKB repressing factor##BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D50918|SEPT6|23157|septin 6##BC069231|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6	0.0	
chrX	71242032	71242144	reg1034053.p2	3.471	+	TSC_hg19_v1_chrX_+_71130694 NM_001013627	-111310	+	NM_001145139 NM_001145140	-258949	+	NM_001145139 NM_001145140	-303954	-	AB082532 BC151224 NM_001024455 TSC_hg19_v1_chrX_-_71351772	109703	-	AK126598 AY572224 NM_207422	121945	+	NM_001170747 NM_006223 BC093700 BC112281 HQ258728 TSC_hg19_v1_chrX_+_71401606 AB009690 BC005234 BC070288 BC111394 BC104653 AK127605 AF143096	159487	+	NM_001013627|NHSL2|340527|NHS-like 2##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##AB082532|RGAG4|340526|retrotransposon gag domain containing 4##BC151224|RGAG4|340526|retrotransposon gag domain containing 4##NM_001024455|RGAG4|340526|retrotransposon gag domain containing 4##AK126598|FLJ44635|392490|TPT1-like protein##AY572224|FLJ44635|392490|TPT1-like protein##NM_207422|FLJ44635|392490|TPT1-like protein##NM_001170747|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##NM_006223|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC093700|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC112281|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##HQ258728|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AB009690|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC005234|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC070288|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC111394|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##BC104653|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AK127605|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)##AF143096|PIN4|5303|protein (peptidylprolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	0.187736	
chr10	11239177	11239358	reg1025469.p1	3.470	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-31775	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-31821	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-31842	+	NM_001080491	335006	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	414369	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	545131	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.0	
chr1	112159021	112159158	reg1039406.p2	3.470	+	BC041707 BC064411 NM_001081976	-52510	-	NM_000677 NM_020683	-112347	-	TSC_hg19_v1_chr1_+_112016601 BC017973 NM_174896	-142491	+	TSC_hg19_v1_chr1_+_112162449 NM_001010935 NM_002884 BC014086	3378	+	AB528568 CU689180 AL137198 AK295012 BC031558 TSC_hg19_v1_chr1_-_112282012 AK055667 NM_019099	122866	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	139130	+	BC041707|ADORA3|140|adenosine A3 receptor##BC064411|ADORA3|140|adenosine A3 receptor##NM_001081976|ADORA3|140|adenosine A3 receptor##NM_000677|ADORA3|140|adenosine A3 receptor##NM_020683|ADORA3|140|adenosine A3 receptor##BC017973|C1orf162|128346|chromosome 1 open reading frame 162##NM_174896|C1orf162|128346|chromosome 1 open reading frame 162##NM_001010935|RAP1A|5906|RAP1A, member of RAS oncogene family##NM_002884|RAP1A|5906|RAP1A, member of RAS oncogene family##BC014086|RAP1A|5906|RAP1A, member of RAS oncogene family##AL137198|FAM212B|55924|family with sequence similarity 212, member B##AK295012|FAM212B|55924|family with sequence similarity 212, member B##BC031558|FAM212B|55924|family with sequence similarity 212, member B##AK055667|FAM212B|55924|family with sequence similarity 212, member B##NM_019099|FAM212B|55924|family with sequence similarity 212, member B##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20	0.0	
chr1	156435968	156436106	reg1035261.p2	3.470	+	NM_006365 U49857 BC059943 BC107686 BC050448 TSC_hg19_v1_chr1_-_156399219 AK095626 BC054045	-36761	-	AF193807 AK290840 AK294641 AK303799 AK303814 AY139092 AY139093 NM_020407 AK308556 TSC_hg19_v1_chr1_+_156339022 AK054780 BC065218	-97016	+	TSC_hg19_v1_chr1_-_156308103 NM_001008800 NM_005998	-127885	-	BC040949 TSC_hg19_v1_chr1_-_156460409	24366	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	34481	-	TSC_hg19_v1_chr1_-_156470563 BC018985 BC032479 AB210005 BC064988	34513	-	NM_006365|C1orf61|10485|chromosome 1 open reading frame 61##U49857|C1orf61|10485|chromosome 1 open reading frame 61##BC059943|C1orf61|10485|chromosome 1 open reading frame 61##BC107686|C1orf61|10485|chromosome 1 open reading frame 61##BC050448|C1orf61|10485|chromosome 1 open reading frame 61##AK095626|C1orf61|10485|chromosome 1 open reading frame 61##BC054045|C1orf61|10485|chromosome 1 open reading frame 61##AF193807|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK290840|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK294641|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303799|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK303814|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139092|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AY139093|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_020407|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK308556|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##AK054780|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##BC065218|RHBG|57127|Rh family, B glycoprotein (gene/pseudogene)##NM_001008800|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##NM_005998|CCT3|7203|chaperonin containing TCP1, subunit 3 (gamma)##BC040949|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D##BC018985|MEF2D|4209|myocyte enhancer factor 2D##BC032479|MEF2D|4209|myocyte enhancer factor 2D##AB210005|MEF2D|4209|myocyte enhancer factor 2D	0.0	
chr12	11918796	11918918	reg1039040.p2	3.470	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-115871	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-116083	+	TSC_hg19_v1_chr12_+_11802659 AK289441	-116184	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	305026	+	AF281254 AF281255 NM_030766 NM_138722	305544	+	AK074543 TSC_hg19_v1_chr12_-_12291395	372527	-	U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AK289441|ETV6|2120|ets variant 6##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6	0.0	
chr1	244615106	244615172	reg1031683.p1	3.470	+	BC054479 NM_001012970	-99203	+	TSC_hg19_v1_chr1_+_244217286 AK310634	-397844	+	BC078175 AJ001388 NM_006352	-398596	+	CU680302 EU831433 EU831525 TSC_hg19_v1_chr1_-_244615212 AK025514 AK303886 BC012356	37	-	TSC_hg19_v1_chr1_-_244615392 AK308749 NM_001126	199	-	NM_001130957 NM_001242340 NM_173807 TSC_hg19_v1_chr1_+_244624690 BC032859 BC028392 AK303059 BX648685 AK302609 DQ891006 EU176575 CU689566	9562	+	BC054479|C1orf100|200159|chromosome 1 open reading frame 100##NM_001012970|C1orf100|200159|chromosome 1 open reading frame 100##BC078175|ZNF238|10472|zinc finger protein 238##AJ001388|ZNF238|10472|zinc finger protein 238##NM_006352|ZNF238|10472|zinc finger protein 238##EU831433|ADSS|159|adenylosuccinate synthase##EU831525|ADSS|159|adenylosuccinate synthase##AK025514|ADSS|159|adenylosuccinate synthase##AK303886|ADSS|159|adenylosuccinate synthase##BC012356|ADSS|159|adenylosuccinate synthase##AK308749|ADSS|159|adenylosuccinate synthase##NM_001126|ADSS|159|adenylosuccinate synthase##NM_001130957|C1orf101|257044|chromosome 1 open reading frame 101##NM_001242340|C1orf101|257044|chromosome 1 open reading frame 101##NM_173807|C1orf101|257044|chromosome 1 open reading frame 101##BC032859|C1orf101|257044|chromosome 1 open reading frame 101##BC028392|C1orf101|257044|chromosome 1 open reading frame 101##AK303059|C1orf101|257044|chromosome 1 open reading frame 101##BX648685|C1orf101|257044|chromosome 1 open reading frame 101##AK302609|C1orf101|257044|chromosome 1 open reading frame 101##DQ891006|C1orf101|257044|chromosome 1 open reading frame 101##EU176575|C1orf101|257044|chromosome 1 open reading frame 101	0.0	
chr12	791901	791987	reg1030609.p2	3.470	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-19229	-	TSC_hg19_v1_chr12_-_752800 AK298043	-39125	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-39766	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	70212	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	70812	+	BC013629 TSC_hg19_v1_chr12_+_1017145	225138	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr15	100367730	100367810	reg1046238.p1	3.470	+	TSC_hg19_v1_chr15_-_100273626 BC041097 NM_152449 AK290296 AK056718	-94136	-	BX640928 TSC_hg19_v1_chr15_-_100273612	-94166	-	TSC_hg19_v1_chr15_-_100273591 BC084545 AK124852	-94204	-	AB527357 AJ315735 NM_139057	514373	-	BC034500 BC034970 NM_178842	717127	-	AK292972 BC010363 TSC_hg19_v1_chr15_-_101142377 AK001445 AK298946 NM_001040616	774639	-	BC041097|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##NM_152449|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK290296|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK056718|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BX640928|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##BC084545|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AK124852|LYSMD4|145748|LysM, putative peptidoglycan-binding, domain containing 4##AJ315735|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##NM_139057|ADAMTS17|170691|ADAM metallopeptidase with thrombospondin type 1 motif, 17##BC034500|CERS3|204219|ceramide synthase 3##BC034970|CERS3|204219|ceramide synthase 3##NM_178842|CERS3|204219|ceramide synthase 3##AK292972|LINS|55180|lines homolog (Drosophila)##BC010363|LINS|55180|lines homolog (Drosophila)##AK001445|LINS|55180|lines homolog (Drosophila)##AK298946|LINS|55180|lines homolog (Drosophila)##NM_001040616|LINS|55180|lines homolog (Drosophila)	0.0	
chr17	40075416	40075483	reg1040589.p2	3.470	+	TSC_hg19_v1_chr17_-_40075239 BC006195 NM_001096 NM_198830 AK295675 AK312315	-184	-	TSC_hg19_v1_chr17_-_40075237 AK304802	-216	-	TSC_hg19_v1_chr17_-_40075205 X64330 AB210035	-240	-	BC025390 TSC_hg19_v1_chr17_+_40086881 NM_031421 AL136760 BC067297 AK055498 AM393695 AB463310 CU688280 CU692988	11476	+	TSC_hg19_v1_chr17_+_40118778 NM_033133	43290	+	TSC_hg19_v1_chr17_+_40118815 BC028040 BC006392 AK295351 AK026876 AK097833 AK098384 AK294179 BC001362 BC011046	43387	+	BC006195|ACLY|47|ATP citrate lyase##NM_001096|ACLY|47|ATP citrate lyase##NM_198830|ACLY|47|ATP citrate lyase##AK295675|ACLY|47|ATP citrate lyase##AK312315|ACLY|47|ATP citrate lyase##AK304802|ACLY|47|ATP citrate lyase##X64330|ACLY|47|ATP citrate lyase##AB210035|ACLY|47|ATP citrate lyase##BC025390|TTC25|83538|tetratricopeptide repeat domain 25##NM_031421|TTC25|83538|tetratricopeptide repeat domain 25##AL136760|TTC25|83538|tetratricopeptide repeat domain 25##BC067297|TTC25|83538|tetratricopeptide repeat domain 25##AK055498|TTC25|83538|tetratricopeptide repeat domain 25##AM393695|TTC25|83538|tetratricopeptide repeat domain 25##NM_033133|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##BC028040|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##BC006392|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK295351|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK026876|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK097833|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK098384|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##AK294179|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##BC001362|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase##BC011046|CNP|1267|2',3'-cyclic nucleotide 3' phosphodiesterase	0.0	
chr3	142838118	142838298	reg1034974.p1	3.470	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-117778	+	TSC_hg19_v1_chr3_+_142682794 BC062727	-155378	+	AK123932 BC118666 BC122527 NM_198504 AY424287	-155993	-	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	443	+	BC067737 TSC_hg19_v1_chr3_+_142895211	56963	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	729059	-	NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC062727|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK123932|PAQR9|344838|progestin and adipoQ receptor family member IX##BC118666|PAQR9|344838|progestin and adipoQ receptor family member IX##BC122527|PAQR9|344838|progestin and adipoQ receptor family member IX##NM_198504|PAQR9|344838|progestin and adipoQ receptor family member IX##AY424287|PAQR9|344838|progestin and adipoQ receptor family member IX##NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9	0.0	
chr3	4515072	4515160	reg1036738.p1	3.470	+	TSC_hg19_v1_chr3_-_4508955 NM_001164674 NM_001164675 NM_182760	-6153	-	AK295240 TSC_hg19_v1_chr3_-_4508953 BC121122 BC121123	-6164	-	TSC_hg19_v1_chr3_-_4508945 AY358092 AK075459	-6173	-	TSC_hg19_v1_chr3_+_4535031 NM_001099952 NM_001168272 NM_002222 AK311008	19915	+	TSC_hg19_v1_chr3_+_4535139 D26070 L38019	20012	+	TSC_hg19_v1_chr3_+_4535164 BC144563	20080	+	NM_001164674|SUMF1|285362|sulfatase modifying factor 1##NM_001164675|SUMF1|285362|sulfatase modifying factor 1##NM_182760|SUMF1|285362|sulfatase modifying factor 1##AK295240|SUMF1|285362|sulfatase modifying factor 1##BC121122|SUMF1|285362|sulfatase modifying factor 1##BC121123|SUMF1|285362|sulfatase modifying factor 1##AY358092|SUMF1|285362|sulfatase modifying factor 1##AK075459|SUMF1|285362|sulfatase modifying factor 1##NM_001099952|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_001168272|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##NM_002222|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##AK311008|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##D26070|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##L38019|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1##BC144563|ITPR1|3708|inositol 1,4,5-trisphosphate receptor, type 1	0.0	
chr4	55875078	55875193	reg1039113.p2	3.470	+	TSC_hg19_v1_chr4_+_55524123 NM_000222 NM_001093772 BC071593 AK304031 X06182 GU983671 HM015525 HM015526 AB463344 EU826594	-351001	+	AK308353 BC015186 TSC_hg19_v1_chr4_+_55095468 M21574 M30494 AK311006 AK316578 M22734 BC063414	-779671	+	NM_006206 TSC_hg19_v1_chr4_+_55095296	-779855	+	AB209901 TSC_hg19_v1_chr4_-_55991763 AF035121 NM_002253	116619	-	TSC_hg19_v1_chr4_+_56212408 NM_024592 AK023414 BC002480	337281	+	TSC_hg19_v1_chr4_+_56212475 CU677982 CR457312	337349	+	NM_000222|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##NM_001093772|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##BC071593|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK304031|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##X06182|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##GU983671|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015525|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##HM015526|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##EU826594|KIT|3815|v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog##AK308353|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC015186|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M21574|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M30494|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK311006|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AK316578|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##M22734|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##BC063414|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##NM_006206|PDGFRA|5156|platelet-derived growth factor receptor, alpha polypeptide##AB209901|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##AF035121|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_002253|KDR|3791|kinase insert domain receptor (a type III receptor tyrosine kinase)##NM_024592|SRD5A3|79644|steroid 5 alpha-reductase 3##AK023414|SRD5A3|79644|steroid 5 alpha-reductase 3##BC002480|SRD5A3|79644|steroid 5 alpha-reductase 3##CR457312|SRD5A3|79644|steroid 5 alpha-reductase 3	0.979903	CTCF.p2:-18:0.980
chr5	137417802	137417889	reg1039156.p1	3.470	+	TSC_hg19_v1_chr5_-_137368794 NM_001101800 NM_001101801 NM_016603	-49055	-	TSC_hg19_v1_chr5_-_137368776 AK314224	-49069	-	TSC_hg19_v1_chr5_-_137368770 BC041335 BC048965	-49074	-	BC144497 AY009402 BC144001 AB057725 NM_058244 AB590697	1834	+	U90450 AK312181 AF067724 BC026182 NM_003551	57258	-	BC008039 BC008076 AB384833 AB209079 TSC_hg19_v1_chr5_-_137514319 AK310380 AK289951 AK293621 AK297756 AK299694 AK312333 AK225928 AL136823 NM_001164326 NM_006696 NM_139199	96488	-	NM_001101800|FAM13B|51306|family with sequence similarity 13, member B##NM_001101801|FAM13B|51306|family with sequence similarity 13, member B##NM_016603|FAM13B|51306|family with sequence similarity 13, member B##AK314224|FAM13B|51306|family with sequence similarity 13, member B##BC041335|FAM13B|51306|family with sequence similarity 13, member B##BC048965|FAM13B|51306|family with sequence similarity 13, member B##BC144497|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AY009402|WNT8A|7478|wingless-type MMTV integration site family, member 8A##BC144001|WNT8A|7478|wingless-type MMTV integration site family, member 8A##AB057725|WNT8A|7478|wingless-type MMTV integration site family, member 8A##NM_058244|WNT8A|7478|wingless-type MMTV integration site family, member 8A##U90450|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AK312181|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##AF067724|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC026182|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##NM_003551|NME5|8382|non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)##BC008039|BRD8|10902|bromodomain containing 8##BC008076|BRD8|10902|bromodomain containing 8##AB209079|BRD8|10902|bromodomain containing 8##AK310380|BRD8|10902|bromodomain containing 8##AK289951|BRD8|10902|bromodomain containing 8##AK293621|BRD8|10902|bromodomain containing 8##AK297756|BRD8|10902|bromodomain containing 8##AK312333|BRD8|10902|bromodomain containing 8##AK225928|BRD8|10902|bromodomain containing 8##AL136823|BRD8|10902|bromodomain containing 8##NM_001164326|BRD8|10902|bromodomain containing 8##NM_006696|BRD8|10902|bromodomain containing 8##NM_139199|BRD8|10902|bromodomain containing 8	0.873424	CTCF.p2:59:0.873
chr6	154822080	154822204	reg1037705.p1	3.470	+	AK289917 AJ310566 NM_001130700 NM_015553 TSC_hg19_v1_chr6_-_154677938	-144227	-	BX647254 NM_001130699	-170928	-	EU360599 EU362990 NM_001145287	-414501	+	TSC_hg19_v1_chr6_-_154831690 BC060761	9529	-	TSC_hg19_v1_chr6_-_154831721 AY328891 AY328892 AY328893 NM_173515	9593	-	TSC_hg19_v1_chr6_-_154831788 AK055911	9660	-	AK289917|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##AJ310566|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130700|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_015553|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##BX647254|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##NM_001130699|IPCEF1|26034|interaction protein for cytohesin exchange factors 1##EU360599|OPRM1|4988|opioid receptor, mu 1##EU362990|OPRM1|4988|opioid receptor, mu 1##NM_001145287|OPRM1|4988|opioid receptor, mu 1##BC060761|CNKSR3|154043|CNKSR family member 3##AY328891|CNKSR3|154043|CNKSR family member 3##AY328892|CNKSR3|154043|CNKSR family member 3##AY328893|CNKSR3|154043|CNKSR family member 3##NM_173515|CNKSR3|154043|CNKSR family member 3##AK055911|CNKSR3|154043|CNKSR family member 3	0.0	
chr6	158065549	158065650	reg1040559.p1	3.470	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-263060	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-320382	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-321015	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	178690	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	178775	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	337288	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.212536	CTCF.p2:3:0.213
chr6	34855810	34855890	reg1033591.p1	3.470	+	AF118094 AB464280 BT019404 BT019405 CR542068 DQ893239 DQ896569 TSC_hg19_v1_chr6_-_34855820 AK313475 BC021972 D63705 AK302226 NM_005643 X83928	-145	-	TSC_hg19_v1_chr6_+_34759872 AK000309 BC108710 BX640641 AB126777 BC137120 BC137127	-95961	+	TSC_hg19_v1_chr6_+_34759793 NM_017754 BC026164	-96080	+	TSC_hg19_v1_chr6_+_34857037 BC022396 NM_015245 D86982 BC031934 BC086310 AK298987 BC132832 BC144341 AB385297	1250	+	AK057234 AK316403 AF536532 BC040003 BC033729 BC090050 AK301778 AK302022 TSC_hg19_v1_chr6_-_35109091 AK098590 AK301975 AK302456 AK302375 AK315078 BC048418 AF536533 NM_001093728 NM_018679	253244	-	TSC_hg19_v1_chr6_+_35181732 BC052263 AK291218	326018	+	AF118094|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BT019404|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BT019405|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##CR542068|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##DQ893239|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##DQ896569|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##AK313475|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BC021972|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##D63705|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##AK302226|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##NM_005643|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##X83928|TAF11|6882|TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa##BX640641|UHRF1BP1|54887|UHRF1 binding protein 1##AB126777|UHRF1BP1|54887|UHRF1 binding protein 1##BC137120|UHRF1BP1|54887|UHRF1 binding protein 1##BC137127|UHRF1BP1|54887|UHRF1 binding protein 1##NM_017754|UHRF1BP1|54887|UHRF1 binding protein 1##BC026164|UHRF1BP1|54887|UHRF1 binding protein 1##BC022396|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##NM_015245|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##D86982|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC031934|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##AK298987|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC132832|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##BC144341|ANKS1A|23294|ankyrin repeat and sterile alpha motif domain containing 1A##AK057234|TCP11|6954|t-complex 11 homolog (mouse)##AK316403|TCP11|6954|t-complex 11 homolog (mouse)##AF536532|TCP11|6954|t-complex 11 homolog (mouse)##BC040003|TCP11|6954|t-complex 11 homolog (mouse)##BC033729|TCP11|6954|t-complex 11 homolog (mouse)##BC090050|TCP11|6954|t-complex 11 homolog (mouse)##AK301778|TCP11|6954|t-complex 11 homolog (mouse)##AK302022|TCP11|6954|t-complex 11 homolog (mouse)##AK098590|TCP11|6954|t-complex 11 homolog (mouse)##AK301975|TCP11|6954|t-complex 11 homolog (mouse)##AK302456|TCP11|6954|t-complex 11 homolog (mouse)##AK302375|TCP11|6954|t-complex 11 homolog (mouse)##AK315078|TCP11|6954|t-complex 11 homolog (mouse)##BC048418|TCP11|6954|t-complex 11 homolog (mouse)##AF536533|TCP11|6954|t-complex 11 homolog (mouse)##NM_001093728|TCP11|6954|t-complex 11 homolog (mouse)##NM_018679|TCP11|6954|t-complex 11 homolog (mouse)##BC052263|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3##AK291218|SCUBE3|222663|signal peptide, CUB domain, EGF-like 3	0.0	
chr7	105070913	105070979	reg1011904.p2	3.470	+	TSC_hg19_v1_chr7_-_105029346 NM_182692	-41604	-	TSC_hg19_v1_chr7_-_105029265 AB489157	-41681	-	BC035214 TSC_hg19_v1_chr7_-_104909496 U88666 NM_182691	-161463	-	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	91715	-	BC068483 NM_021930 AK055508 TSC_hg19_v1_chr7_+_105172647 AK308126 AF317622 HQ257980	101700	+	TSC_hg19_v1_chr7_-_105221933 BC062748 BC105284	150989	-	NM_182692|SRPK2|6733|SRSF protein kinase 2##BC035214|SRPK2|6733|SRSF protein kinase 2##U88666|SRPK2|6733|SRSF protein kinase 2##NM_182691|SRPK2|6733|SRSF protein kinase 2##BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##BC068483|RINT1|60561|RAD50 interactor 1##NM_021930|RINT1|60561|RAD50 interactor 1##AK055508|RINT1|60561|RAD50 interactor 1##AK308126|RINT1|60561|RAD50 interactor 1##AF317622|RINT1|60561|RAD50 interactor 1##HQ257980|RINT1|60561|RAD50 interactor 1##BC105284|EFCAB10|100130771|EF-hand calcium binding domain 10	0.0	
chrX	103727571	103727712	reg1040386.p1	3.470	+	BC042633 AY114148 BC053599 NM_153448 AK097704	-228055	-	TSC_hg19_v1_chrX_+_103411251 BC017665	-316374	+	TSC_hg19_v1_chrX_+_103411133 AK091221 AX746858 BC057847 NM_207318	-316517	+	AK290196 TSC_hg19_v1_chrX_+_103810879	83238	+	TSC_hg19_v1_chrX_+_103810991 AJ272208 NM_017416	83351	+	BC108734 AF285597 BC042547 NM_031274	737712	-	BC042633|ESX1|80712|ESX homeobox 1##AY114148|ESX1|80712|ESX homeobox 1##BC053599|ESX1|80712|ESX homeobox 1##NM_153448|ESX1|80712|ESX homeobox 1##AK097704|ESX1|80712|ESX homeobox 1##BC017665|FAM199X|139231|family with sequence similarity 199, X-linked##AK091221|FAM199X|139231|family with sequence similarity 199, X-linked##BC057847|FAM199X|139231|family with sequence similarity 199, X-linked##NM_207318|FAM199X|139231|family with sequence similarity 199, X-linked##AK290196|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##AJ272208|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##NM_017416|IL1RAPL2|26280|interleukin 1 receptor accessory protein-like 2##BC108734|TEX13A|56157|testis expressed 13A##AF285597|TEX13A|56157|testis expressed 13A##BC042547|TEX13A|56157|testis expressed 13A##NM_031274|TEX13A|56157|testis expressed 13A	0.985546	CTCF.p2:1:0.986
chr1	150048340	150048416	reg1040204.p1	3.469	+	TSC_hg19_v1_chr1_+_150039889 AK298835 AK023170 AK293555 BC012932 AF165513 AK295529 AJ133421 AK223214 AK307949 CU688480	-8514	+	NM_007259 BC028382 AK301994 AK298786	-8989	+	AJ293573 BC072681 BC020622 TSC_hg19_v1_chr1_-_149982676 AK299790 NM_020205	-65756	-	TSC_hg19_v1_chr1_+_150122120 AK302255 AF192912 AF291105 NM_016274	73754	+	TSC_hg19_v1_chr1_+_150122268 AF217956 AF168676 BC010149	73926	+	TSC_hg19_v1_chr1_+_150122415 AB464030 AK222921 CU679641 DQ893381 DQ896780 AF073836	74060	+	AK298835|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK023170|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK293555|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##BC012932|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AF165513|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK295529|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AJ133421|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK223214|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK307949|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##NM_007259|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##BC028382|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK301994|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AK298786|VPS45|11311|vacuolar protein sorting 45 homolog (S. cerevisiae)##AJ293573|OTUD7B|56957|OTU domain containing 7B##BC072681|OTUD7B|56957|OTU domain containing 7B##BC020622|OTUD7B|56957|OTU domain containing 7B##AK299790|OTUD7B|56957|OTU domain containing 7B##NM_020205|OTUD7B|56957|OTU domain containing 7B##AK302255|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF192912|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF291105|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##NM_016274|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF217956|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF168676|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##BC010149|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AK222921|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ893381|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##DQ896780|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1##AF073836|PLEKHO1|51177|pleckstrin homology domain containing, family O member 1	0.0	
chr11	5389997	5390067	reg1036068.p1	3.469	+	AB463972 NM_001004750	-17295	+	HQ258158 BC117461 NM_033180	-44477	-	BC100919 BC069094 BC148186 BC153815 NM_033179	-66858	-	BC136912 BC136913 NM_001004756	20574	+	BC136999 NM_001004757	53308	+	BC151148 NM_001005288	72750	-	NM_001004750|OR51B6|390058|olfactory receptor, family 51, subfamily B, member 6##HQ258158|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2##BC117461|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2##NM_033180|OR51B2|79345|olfactory receptor, family 51, subfamily B, member 2##BC100919|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC069094|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC148186|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC153815|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##NM_033179|OR51B4|79339|olfactory receptor, family 51, subfamily B, member 4##BC136912|OR51M1|390059|olfactory receptor, family 51, subfamily M, member 1##BC136913|OR51M1|390059|olfactory receptor, family 51, subfamily M, member 1##NM_001004756|OR51M1|390059|olfactory receptor, family 51, subfamily M, member 1##BC136999|OR51Q1|390061|olfactory receptor, family 51, subfamily Q, member 1##NM_001004757|OR51Q1|390061|olfactory receptor, family 51, subfamily Q, member 1##BC151148|OR51I1|390063|olfactory receptor, family 51, subfamily I, member 1##NM_001005288|OR51I1|390063|olfactory receptor, family 51, subfamily I, member 1	0.0	
chr12	54121137	54121263	reg1030147.p1	3.469	+	NM_001002031	-50689	-	NM_005176	-51092	-	D28402 TSC_hg19_v1_chr12_-_54069859 AK130971	-51324	-	AB040969 TSC_hg19_v1_chr12_-_54121231 AF370415 AY563137 BC003177 AY358397 AL136895 AK122773 AK222646 AK092788 AX747731 AK294424 AK296497 AK309199 AK027881 AK315578 NM_001143682 NM_020898	54	-	AF255676 NM_017410 BC090850 AF263466 BC002754 BT009908	211432	+	TSC_hg19_v1_chr12_+_54348683 AB464579 NM_173860	227498	+	NM_001002031|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##NM_005176|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##D28402|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##AK130971|ATP5G2|517|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C2 (subunit 9)##AB040969|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AF370415|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY563137|CALCOCO1|57658|calcium binding and coiled-coil domain 1##BC003177|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AY358397|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AL136895|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK122773|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK222646|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK092788|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK294424|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK296497|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK309199|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK027881|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AK315578|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_001143682|CALCOCO1|57658|calcium binding and coiled-coil domain 1##NM_020898|CALCOCO1|57658|calcium binding and coiled-coil domain 1##AF255676|HOXC13|3229|homeobox C13##NM_017410|HOXC13|3229|homeobox C13##BC090850|HOXC13|3229|homeobox C13##AF263466|HOXC13|3229|homeobox C13##BC002754|HOXC13|3229|homeobox C13##BT009908|HOXC13|3229|homeobox C13##NM_173860|HOXC12|3228|homeobox C12	0.0	
chr1	25466552	25466621	reg1028171.p1	3.469	+	BC013362 AK310945 NM_001031680 AF022726	-175044	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-209800	-	TSC_hg19_v1_chr1_-_25256761 AK301044	-209847	-	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	92401	-	BC065040 TSC_hg19_v1_chr1_-_25573922	107337	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	107387	-	BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##AK301044|RUNX3|864|runt-related transcription factor 3##DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63	0.0	
chr13	41363590	41363750	reg1033261.p2	3.469	+	NM_014252 TSC_hg19_v1_chr13_+_41363596 BC002702	-81	+	TSC_hg19_v1_chr13_-_41345327 NM_005830	-18338	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	-18378	-	TSC_hg19_v1_chr13_+_41363716 AK313602 AK296862 AF112968	14	+	AF177333 TSC_hg19_v1_chr13_+_41363756	96	+	TSC_hg19_v1_chr13_-_41495877 AK096993 BC047078 BC020814	132195	-	NM_014252|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##BC002702|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##AK313602|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK296862|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AF112968|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AF177333|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK096993|LOC100616668|100616668|TPTE2 pseudogene##BC047078|LOC100616668|100616668|TPTE2 pseudogene##BC020814|SUGT1P3|283507|suppressor of G2 allele of SKP1 (S. cerevisiae) pseudogene 3	0.0	
chr13	99248799	99248913	reg1036134.p2	3.469	+	TSC_hg19_v1_chr13_-_99229363 BC035578 BC065378 NM_001032296	-19545	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	-19734	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	-19802	-	BC096327 BC096328 BC096329 BC099651 AF043233 AY634368 U13173 U21936 NM_005073	156049	-	AB028981 TSC_hg19_v1_chr13_-_99630287 CR936820 AK126492 NM_001130048 NM_001130050	381434	-	BC136274 BC171753 BC146814 AF527605 NM_001130049 NM_015296 TSC_hg19_v1_chr13_-_99738723	489835	-	BC035578|STK24|8428|serine/threonine kinase 24##BC065378|STK24|8428|serine/threonine kinase 24##NM_001032296|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##BC096327|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096328|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC096329|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##BC099651|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AF043233|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AY634368|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U13173|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##U21936|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##NM_005073|SLC15A1|6564|solute carrier family 15 (oligopeptide transporter), member 1##AB028981|DOCK9|23348|dedicator of cytokinesis 9##CR936820|DOCK9|23348|dedicator of cytokinesis 9##AK126492|DOCK9|23348|dedicator of cytokinesis 9##NM_001130048|DOCK9|23348|dedicator of cytokinesis 9##NM_001130050|DOCK9|23348|dedicator of cytokinesis 9##BC136274|DOCK9|23348|dedicator of cytokinesis 9##BC171753|DOCK9|23348|dedicator of cytokinesis 9##BC146814|DOCK9|23348|dedicator of cytokinesis 9##AF527605|DOCK9|23348|dedicator of cytokinesis 9##NM_001130049|DOCK9|23348|dedicator of cytokinesis 9##NM_015296|DOCK9|23348|dedicator of cytokinesis 9	0.0	
chr19	35823824	35823913	reg1033013.p1	3.469	+	TSC_hg19_v1_chr19_+_35820089 NM_001185099 NM_001185100 NM_001185101 NM_001771 AK026467 AK225625 AK225694 AK301177 X59350 BC109307	-3777	+	NM_001199216 NM_002361 NM_080600 AK223562 BC093045 TSC_hg19_v1_chr19_+_35783063 BC034042 AK094545 AK222649 AK308976 M29273 AB209170 AK294644 AK222680 BC053347	-40826	+	AF309489 NM_021175 TSC_hg19_v1_chr19_+_35773430 AK096110 BC020612 AF131292 AY358669 AJ277280	-50443	+	NM_005303 AB464536 BC120944 EF611308 BC095536 BC120943	18582	+	AK290710 NM_005304 BC035657	25626	+	AB378083 AB464537 BC096198 BC096199 BC096200 BC096201 NM_005306 BC095535	116749	+	NM_001185099|CD22|933|CD22 molecule##NM_001185100|CD22|933|CD22 molecule##NM_001185101|CD22|933|CD22 molecule##NM_001771|CD22|933|CD22 molecule##AK026467|CD22|933|CD22 molecule##AK225625|CD22|933|CD22 molecule##AK225694|CD22|933|CD22 molecule##AK301177|CD22|933|CD22 molecule##X59350|CD22|933|CD22 molecule##BC109307|CD22|933|CD22 molecule##NM_001199216|MAG|4099|myelin associated glycoprotein##NM_002361|MAG|4099|myelin associated glycoprotein##NM_080600|MAG|4099|myelin associated glycoprotein##AK223562|MAG|4099|myelin associated glycoprotein##BC093045|MAG|4099|myelin associated glycoprotein##BC034042|MAG|4099|myelin associated glycoprotein##AK094545|MAG|4099|myelin associated glycoprotein##AK222649|MAG|4099|myelin associated glycoprotein##AK308976|MAG|4099|myelin associated glycoprotein##M29273|MAG|4099|myelin associated glycoprotein##AK294644|MAG|4099|myelin associated glycoprotein##AK222680|MAG|4099|myelin associated glycoprotein##BC053347|MAG|4099|myelin associated glycoprotein##AF309489|HAMP|57817|hepcidin antimicrobial peptide##NM_021175|HAMP|57817|hepcidin antimicrobial peptide##AK096110|HAMP|57817|hepcidin antimicrobial peptide##BC020612|HAMP|57817|hepcidin antimicrobial peptide##AF131292|HAMP|57817|hepcidin antimicrobial peptide##AY358669|HAMP|57817|hepcidin antimicrobial peptide##AJ277280|HAMP|57817|hepcidin antimicrobial peptide##NM_005303|FFAR1|2864|free fatty acid receptor 1##BC120944|FFAR1|2864|free fatty acid receptor 1##EF611308|FFAR1|2864|free fatty acid receptor 1##BC095536|FFAR1|2864|free fatty acid receptor 1##BC120943|FFAR1|2864|free fatty acid receptor 1##AK290710|FFAR3|2865|free fatty acid receptor 3##NM_005304|FFAR3|2865|free fatty acid receptor 3##BC035657|FFAR3|2865|free fatty acid receptor 3##AB378083|FFAR2|2867|free fatty acid receptor 2##BC096198|FFAR2|2867|free fatty acid receptor 2##BC096199|FFAR2|2867|free fatty acid receptor 2##BC096200|FFAR2|2867|free fatty acid receptor 2##BC096201|FFAR2|2867|free fatty acid receptor 2##NM_005306|FFAR2|2867|free fatty acid receptor 2##BC095535|FFAR2|2867|free fatty acid receptor 2	0.0	
chr20	62199203	62199384	reg1037350.p1	3.469	+	AB051556 BC150283 NM_033405	-187	-	BC000912 NM_024059	-14921	+	AB527384 NM_080823	-20458	-	TSC_hg19_v1_chr20_-_62205593 AB232667 BC035130 AK023724 NM_001037335	6295	-	AB033095 TSC_hg19_v1_chr20_-_62258409 BC036305 NM_012384	59082	-	TSC_hg19_v1_chr20_-_62258426 AK298927	59144	-	AB051556|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC150283|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##NM_033405|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC000912|C20orf195|79025|chromosome 20 open reading frame 195##NM_024059|C20orf195|79025|chromosome 20 open reading frame 195##NM_080823|SRMS|6725|src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites##AB232667|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##BC035130|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##AK023724|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##NM_001037335|PRIC285|85441|peroxisomal proliferator-activated receptor A interacting complex 285##AB033095|GMEB2|26205|glucocorticoid modulatory element binding protein 2##BC036305|GMEB2|26205|glucocorticoid modulatory element binding protein 2##NM_012384|GMEB2|26205|glucocorticoid modulatory element binding protein 2##AK298927|GMEB2|26205|glucocorticoid modulatory element binding protein 2	0.0	
chr2	85581724	85581881	reg1035182.p2	3.469	+	TSC_hg19_v1_chr2_-_85581652 EU831583 EU831668 AL833237 AY358568 BC068517 AK296522 AK075261 NM_017750	-111	-	TSC_hg19_v1_chr2_-_85555373 BX640868 NM_001206840 NM_001206841 NM_001206844 NM_006464	-26414	-	AK223063 TSC_hg19_v1_chr2_-_85555113 AK126465 AK222829 BX640733 AK312479 BC008461 AF027515 AF027516 U62390	-26672	-	TSC_hg19_v1_chr2_+_85581891 NM_001135021 NM_001135022 NM_001135023 NM_032213 BC054504 BC112324 AK307252 BC010991 BC001942 BC018666	95	+	BC000728 M94345 TSC_hg19_v1_chr2_-_85637473 BC014549	55675	-	TSC_hg19_v1_chr2_-_85637490 AK225374 AK225378 NM_001747 AK130130	55850	-	EU831583|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##EU831668|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##AL833237|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##AY358568|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##BC068517|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##AK296522|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##AK075261|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##NM_017750|RETSAT|54884|retinol saturase (all-trans-retinol 13,14-reductase)##BX640868|TGOLN2|10618|trans-golgi network protein 2##NM_001206840|TGOLN2|10618|trans-golgi network protein 2##NM_001206841|TGOLN2|10618|trans-golgi network protein 2##NM_001206844|TGOLN2|10618|trans-golgi network protein 2##NM_006464|TGOLN2|10618|trans-golgi network protein 2##AK223063|TGOLN2|10618|trans-golgi network protein 2##AK126465|TGOLN2|10618|trans-golgi network protein 2##AK222829|TGOLN2|10618|trans-golgi network protein 2##BX640733|TGOLN2|10618|trans-golgi network protein 2##AK312479|TGOLN2|10618|trans-golgi network protein 2##BC008461|TGOLN2|10618|trans-golgi network protein 2##AF027515|TGOLN2|10618|trans-golgi network protein 2##AF027516|TGOLN2|10618|trans-golgi network protein 2##U62390|TGOLN2|10618|trans-golgi network protein 2##NM_001135021|ELMOD3|84173|ELMO/CED-12 domain containing 3##NM_001135022|ELMOD3|84173|ELMO/CED-12 domain containing 3##NM_001135023|ELMOD3|84173|ELMO/CED-12 domain containing 3##NM_032213|ELMOD3|84173|ELMO/CED-12 domain containing 3##BC054504|ELMOD3|84173|ELMO/CED-12 domain containing 3##BC112324|ELMOD3|84173|ELMO/CED-12 domain containing 3##AK307252|ELMOD3|84173|ELMO/CED-12 domain containing 3##BC010991|ELMOD3|84173|ELMO/CED-12 domain containing 3##BC001942|ELMOD3|84173|ELMO/CED-12 domain containing 3##BC018666|ELMOD3|84173|ELMO/CED-12 domain containing 3##BC000728|CAPG|822|capping protein (actin filament), gelsolin-like##M94345|CAPG|822|capping protein (actin filament), gelsolin-like##BC014549|CAPG|822|capping protein (actin filament), gelsolin-like##AK225374|CAPG|822|capping protein (actin filament), gelsolin-like##AK225378|CAPG|822|capping protein (actin filament), gelsolin-like##NM_001747|CAPG|822|capping protein (actin filament), gelsolin-like##AK130130|CAPG|822|capping protein (actin filament), gelsolin-like	0.0	
chr3	195910602	195910685	reg1029733.p2	3.469	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-101627	-	TSC_hg19_v1_chr3_-_195808984 M11507	-101660	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-101682	-	BC034801 BC022078 NM_001039617 AK122907	27638	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	32751	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	103892	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr4	89241889	89242048	reg1036432.p1	3.469	+	AY435431 NM_152542 TSC_hg19_v1_chr4_-_89205908 AL834167	-36065	-	TSC_hg19_v1_chr4_-_89205714 AL834271 AK314417 AK054678 AY157615 AY994097 AF351614 BC020850 BC037552	-36241	-	BC021281 NM_004827 AF151530	-161931	-	TSC_hg19_v1_chr4_+_89299890 AF336798 AY653201 AY653202 AY653203 NM_001165136 NM_017912	57914	+	AK295832 TSC_hg19_v1_chr4_+_89300006 BC042047	58029	+	TSC_hg19_v1_chr4_+_89300147 AK092403 AX747525 BX647121	58198	+	AY435431|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##NM_152542|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AL834167|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AL834271|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AK314417|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AK054678|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY157615|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AY994097|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##AF351614|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC020850|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC037552|PPM1K|152926|protein phosphatase, Mg2+/Mn2+ dependent, 1K##BC021281|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2##NM_004827|ABCG2|9429|ATP-binding cassette, sub-family G (WHITE), member 2##AF336798|HERC6|55008|hect domain and RLD 6##AY653201|HERC6|55008|hect domain and RLD 6##AY653202|HERC6|55008|hect domain and RLD 6##AY653203|HERC6|55008|hect domain and RLD 6##NM_001165136|HERC6|55008|hect domain and RLD 6##NM_017912|HERC6|55008|hect domain and RLD 6##AK295832|HERC6|55008|hect domain and RLD 6##BC042047|HERC6|55008|hect domain and RLD 6##AK092403|HERC6|55008|hect domain and RLD 6##BX647121|HERC6|55008|hect domain and RLD 6	0.0	
chr5	169005146	169005247	reg1040621.p2	3.469	+	AB383998 AK310549 TSC_hg19_v1_chr5_-_168728144 BC142665 BC142717 AY358884 AB017169 BC098388 AB011538 BC146759 NM_003062	-277238	-	TSC_hg19_v1_chr5_-_168271862 BC023515	-733337	-	TSC_hg19_v1_chr5_-_168006609 BC013705 NM_024594	-998681	-	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	5525	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	59048	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	59104	+	AK310549|SLIT3|6586|slit homolog 3 (Drosophila)##BC142665|SLIT3|6586|slit homolog 3 (Drosophila)##BC142717|SLIT3|6586|slit homolog 3 (Drosophila)##AY358884|SLIT3|6586|slit homolog 3 (Drosophila)##AB017169|SLIT3|6586|slit homolog 3 (Drosophila)##BC098388|SLIT3|6586|slit homolog 3 (Drosophila)##AB011538|SLIT3|6586|slit homolog 3 (Drosophila)##BC146759|SLIT3|6586|slit homolog 3 (Drosophila)##NM_003062|SLIT3|6586|slit homolog 3 (Drosophila)##BC013705|PANK3|79646|pantothenate kinase 3##NM_024594|PANK3|79646|pantothenate kinase 3##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2	0.543693	CTCF.p2:3:0.544
chr7	127238544	127238651	reg1033314.p2	3.469	+	AF281049 NM_020369 AK225867 AK300518 AK301765 AK314050 BC035606 DQ892069 DQ895262 CU690130	-4800	+	NM_001662 TSC_hg19_v1_chr7_+_127228469 AK307297 AK308548 BC033104 M57567 AK297026 AK312107 BC003043 AB528679 AF493884 BT007087	-10119	+	BC014100 NM_024523 TSC_hg19_v1_chr7_-_127225654	-12925	-	AB528989 EU446646 BC074761 BC107149 BC107150 AF043978 NM_006193	17079	-	TSC_hg19_v1_chr7_+_127292198 NM_014390	53585	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	53639	+	AF281049|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##NM_020369|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##AK225867|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##AK300518|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##AK314050|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##BC035606|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##DQ892069|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##DQ895262|FSCN3|29999|fascin homolog 3, actin-bundling protein, testicular (Strongylocentrotus purpuratus)##NM_001662|ARF5|381|ADP-ribosylation factor 5##AK307297|ARF5|381|ADP-ribosylation factor 5##AK308548|ARF5|381|ADP-ribosylation factor 5##BC033104|ARF5|381|ADP-ribosylation factor 5##M57567|ARF5|381|ADP-ribosylation factor 5##AK297026|ARF5|381|ADP-ribosylation factor 5##AK312107|ARF5|381|ADP-ribosylation factor 5##BC003043|ARF5|381|ADP-ribosylation factor 5##AF493884|ARF5|381|ADP-ribosylation factor 5##BT007087|ARF5|381|ADP-ribosylation factor 5##BC014100|GCC1|79571|GRIP and coiled-coil domain containing 1##NM_024523|GCC1|79571|GRIP and coiled-coil domain containing 1##EU446646|PAX4|5078|paired box 4##BC074761|PAX4|5078|paired box 4##BC107149|PAX4|5078|paired box 4##BC107150|PAX4|5078|paired box 4##AF043978|PAX4|5078|paired box 4##NM_006193|PAX4|5078|paired box 4##NM_014390|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1	1.28811	CTCF.p2:-8:0.774	CTCF.p2:-71:0.514
chr7	28579490	28579626	reg1023908.p2	3.469	+	AK292916 TSC_hg19_v1_chr7_+_28530784	-48793	+	L05911 NM_004904	-104325	+	L05515 NM_182898	-127415	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	146125	+	CU690330 TSC_hg19_v1_chr7_-_28997732	418139	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	418371	-	AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##L05515|CREB5|9586|cAMP responsive element binding protein 5##NM_182898|CREB5|9586|cAMP responsive element binding protein 5##L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats	0.0	
chr9	113666216	113666282	reg1045558.p1	3.469	+	NM_001166280 NM_001166281 NM_005592 AF006464 BC109098 BC109099 EU832778 EU832779 GQ129313	-235133	+	TSC_hg19_v1_chr9_-_113342011 AJ619977 AY243503 AK122605 BC030816 NM_153366	-324185	-	HQ258720 AF305830 BC130549 BC130551 BC144461 BC035743 NM_001003936	-566149	-	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	134163	-	AK298590 TSC_hg19_v1_chr9_-_113801086	134784	-	TSC_hg19_v1_chr9_-_113801481 AK290287	135253	-	NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1##AK298590|LPAR1|1902|lysophosphatidic acid receptor 1##AK290287|LPAR1|1902|lysophosphatidic acid receptor 1	0.0	
chr1	38493958	38494107	reg1036574.p2	3.468	+	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-15602	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-15647	+	TSC_hg19_v1_chr1_-_38471187 BC014501 BC001351 BC011697 AK309179 AK290641 NM_001243878 NM_004468	-22799	-	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	18417	-	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	831354	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	844984	-	AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC014501|FHL3|2275|four and a half LIM domains 3##BC001351|FHL3|2275|four and a half LIM domains 3##BC011697|FHL3|2275|four and a half LIM domains 3##AK309179|FHL3|2275|four and a half LIM domains 3##AK290641|FHL3|2275|four and a half LIM domains 3##NM_001243878|FHL3|2275|four and a half LIM domains 3##NM_004468|FHL3|2275|four and a half LIM domains 3##L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein	0.0	
chr15	91396229	91396358	reg1037399.p2	3.468	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	-135679	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-323097	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-464754	+	NM_002569 X17094	15591	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	31408	+	DQ891350 DQ894530 AB590559 AY513654 AY513655 AY513656 AY513657 NM_001143783 NM_001143784	31980	+	BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene##DQ891350|FES|2242|feline sarcoma oncogene##DQ894530|FES|2242|feline sarcoma oncogene##AY513654|FES|2242|feline sarcoma oncogene##AY513655|FES|2242|feline sarcoma oncogene##AY513656|FES|2242|feline sarcoma oncogene##AY513657|FES|2242|feline sarcoma oncogene##NM_001143783|FES|2242|feline sarcoma oncogene##NM_001143784|FES|2242|feline sarcoma oncogene	0.0	
chr17	68204588	68204661	reg1039714.p2	3.468	+	TSC_hg19_v1_chr17_+_68165672 AF153820 NM_000891 U16861 U12507	-38928	+	BC033038 NM_170742	-103630	+	BC030961 AF153815 AF153816 NM_018658 NM_170741 AK225944 AK290799	-133194	+	TSC_hg19_v1_chr17_-_70116937 AL833139	1912314	-	TSC_hg19_v1_chr17_+_70117160 NM_000346 AK295455	1912535	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	1912546	+	AF153820|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##NM_000891|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U16861|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##U12507|KCNJ2|3759|potassium inwardly-rectifying channel, subfamily J, member 2##BC033038|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170742|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##BC030961|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153815|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AF153816|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_018658|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##NM_170741|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK225944|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AK290799|KCNJ16|3773|potassium inwardly-rectifying channel, subfamily J, member 16##AL833139|FLJ37644|400618|uncharacterized LOC400618##NM_000346|SOX9|6662|SRY (sex determining region Y)-box 9##AK295455|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9	0.0	
chr19	16245322	16245490	reg1035569.p1	3.468	+	AY319652 NM_032855	-569	+	TSC_hg19_v1_chr19_-_16243033 AY927516	-2344	-	AK293676 TSC_hg19_v1_chr19_+_16222706 X56741 AF498943 BT007184 CR536583 CR542274 DQ892523 DQ895735 AB209767	-22684	+	TSC_hg19_v1_chr19_-_16250705 AK095221	5298	-	TSC_hg19_v1_chr19_+_16254533 AK027792 AK131222 AK300027 AK298682 AK307563 BC016826	9096	+	AB050868 BC069320 BC069428 BC069524 NM_054113 HQ258101 BC112200 BC113591	38904	-	AY319652|HSH2D|84941|hematopoietic SH2 domain containing##NM_032855|HSH2D|84941|hematopoietic SH2 domain containing##AK293676|RAB8A|4218|RAB8A, member RAS oncogene family##X56741|RAB8A|4218|RAB8A, member RAS oncogene family##AF498943|RAB8A|4218|RAB8A, member RAS oncogene family##BT007184|RAB8A|4218|RAB8A, member RAS oncogene family##CR536583|RAB8A|4218|RAB8A, member RAS oncogene family##CR542274|RAB8A|4218|RAB8A, member RAS oncogene family##DQ892523|RAB8A|4218|RAB8A, member RAS oncogene family##DQ895735|RAB8A|4218|RAB8A, member RAS oncogene family##AB209767|RAB8A|4218|RAB8A, member RAS oncogene family##AK027792|HSH2D|84941|hematopoietic SH2 domain containing##AK131222|HSH2D|84941|hematopoietic SH2 domain containing##AK300027|HSH2D|84941|hematopoietic SH2 domain containing##AK298682|HSH2D|84941|hematopoietic SH2 domain containing##AK307563|HSH2D|84941|hematopoietic SH2 domain containing##BC016826|HSH2D|84941|hematopoietic SH2 domain containing##AB050868|CIB3|117286|calcium and integrin binding family member 3##BC069320|CIB3|117286|calcium and integrin binding family member 3##BC069428|CIB3|117286|calcium and integrin binding family member 3##BC069524|CIB3|117286|calcium and integrin binding family member 3##NM_054113|CIB3|117286|calcium and integrin binding family member 3##HQ258101|CIB3|117286|calcium and integrin binding family member 3##BC112200|CIB3|117286|calcium and integrin binding family member 3##BC113591|CIB3|117286|calcium and integrin binding family member 3	0.0	
chr22	43291576	43291678	reg1042362.p2	3.468	+	TSC_hg19_v1_chr22_-_43253305 NM_001142293 NM_014570	-38272	-	TSC_hg19_v1_chr22_-_43253280 AF111847 AK307967 AK315720 AL159143 AK300531 AK297635	-38357	-	TSC_hg19_v1_chr22_-_43253228 CU012940 CU013228 CU674999 DQ893007 DQ896253 CR456382 BC005122	-38416	-	BC008037 NM_007229	51419	-	AL136845 NM_001184971	64259	-	TSC_hg19_v1_chr22_-_43411136 AF128536	119512	-	NM_001142293|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##NM_014570|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AF111847|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK307967|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK315720|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AL159143|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK300531|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##AK297635|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU012940|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CU013228|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ893007|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##DQ896253|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##CR456382|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC005122|ARFGAP3|26286|ADP-ribosylation factor GTPase activating protein 3##BC008037|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_007229|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AL136845|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##NM_001184971|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2##AF128536|PACSIN2|11252|protein kinase C and casein kinase substrate in neurons 2	0.0	
chr3	32497565	32497720	reg1041321.p1	3.468	+	TSC_hg19_v1_chr3_+_32433370 BC010116 AY174113 DQ132881 AK308878	-64239	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	-64473	+	TSC_hg19_v1_chr3_+_32280215 BC041390	-217423	+	CR457231 TSC_hg19_v1_chr3_-_32544290	46630	-	TSC_hg19_v1_chr3_-_32544335 AK000403	46691	-	BC002797 TSC_hg19_v1_chr3_-_32544365 NM_017801	46738	-	BC010116|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AY174113|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##DQ132881|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AK308878|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##CR457231|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##AK000403|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##BC002797|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##NM_017801|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6	0.0	
chr3	78786242	78786346	reg1041323.p1	3.468	+	TSC_hg19_v1_chr3_-_78666943 AK025535	-119309	-	TSC_hg19_v1_chr3_+_77089260 DQ533874 NM_002942	-1697014	+	TSC_hg19_v1_chr3_-_75834698 AK123776	-2951592	-	TSC_hg19_v1_chr3_-_79068579 NM_001145845 NM_133631	282293	-	NM_002941	1030764	-	TSC_hg19_v1_chr3_-_81810692 EU176342 L07956	3024403	-	AK025535|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##DQ533874|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##NM_002942|ROBO2|6092|roundabout, axon guidance receptor, homolog 2 (Drosophila)##AK123776|ZNF717|100131827|zinc finger protein 717##NM_001145845|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_133631|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##NM_002941|ROBO1|6091|roundabout, axon guidance receptor, homolog 1 (Drosophila)##EU176342|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1##L07956|GBE1|2632|glucan (1,4-alpha-), branching enzyme 1	0.0	
chr5	114922188	114922265	reg1010529.p1	3.468	+	TSC_hg19_v1_chr5_-_114880540 BC028369 NM_020177	-41663	-	TSC_hg19_v1_chr5_-_114880370 AL365415 AK315803 BC098385	-41869	-	AB587510 AJ580807 NM_001040440	-289878	-	BC109265 BC109266 NM_021649	15891	-	TSC_hg19_v1_chr5_-_114961697 AK074962	39466	-	TSC_hg19_v1_chr5_-_114961708 AY304583 AY304584 BC019349 AK075218 AK304210 AK027512 NM_001164468 NM_001164469 NM_181836	39568	-	BC028369|FEM1C|56929|fem-1 homolog c (C. elegans)##NM_020177|FEM1C|56929|fem-1 homolog c (C. elegans)##AL365415|FEM1C|56929|fem-1 homolog c (C. elegans)##AK315803|FEM1C|56929|fem-1 homolog c (C. elegans)##BC098385|FEM1C|56929|fem-1 homolog c (C. elegans)##AJ580807|CCDC112|153733|coiled-coil domain containing 112##NM_001040440|CCDC112|153733|coiled-coil domain containing 112##BC109265|TICAM2|353376|toll-like receptor adaptor molecule 2##BC109266|TICAM2|353376|toll-like receptor adaptor molecule 2##NM_021649|TICAM2|353376|toll-like receptor adaptor molecule 2##AK074962|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AY304583|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AY304584|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##BC019349|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK075218|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##AK304210|TMED7|51014|transmembrane emp24 protein transport domain containing 7##AK027512|TMED7|51014|transmembrane emp24 protein transport domain containing 7##NM_001164468|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_001164469|TMED7-TICAM2|100302736|TMED7-TICAM2 readthrough##NM_181836|TMED7|51014|transmembrane emp24 protein transport domain containing 7	0.012523	
chr1	145715886	145715952	reg1034387.p2	3.467	+	AF060981 BC014465 NM_007053 AK128370	-332	-	AL079314 TSC_hg19_v1_chr1_+_145663283	-52700	+	TSC_hg19_v1_chr1_+_145611124 AF419857 NM_014455 AK290749 AF542552 BC054049 BC064903 CU691082 EU446627 EU446791 GQ129333 GQ129334	-104739	+	NM_001201325 NM_001201326 NM_002614 TSC_hg19_v1_chr1_+_145727703	11765	+	TSC_hg19_v1_chr1_+_145727712 AK313100 AK298269 BC006496 BC006518 AF012281	11800	+	BT006679 DQ890650 DQ893830 AB528816 TSC_hg19_v1_chr1_-_145827047 BC003187 AK316371 BC146880 AF132947 U78723 BC067816 AB097024 AB097025 AK223223 AK299995 AK302266 AY358966 AK021758 AK297145 NM_001097612 NM_001097613	111097	-	AF060981|CD160|11126|CD160 molecule##BC014465|CD160|11126|CD160 molecule##NM_007053|CD160|11126|CD160 molecule##AK128370|CD160|11126|CD160 molecule##AL079314|RNF115|27246|ring finger protein 115##AF419857|RNF115|27246|ring finger protein 115##NM_014455|RNF115|27246|ring finger protein 115##AK290749|RNF115|27246|ring finger protein 115##AF542552|RNF115|27246|ring finger protein 115##BC054049|RNF115|27246|ring finger protein 115##BC064903|RNF115|27246|ring finger protein 115##EU446627|RNF115|27246|ring finger protein 115##EU446791|RNF115|27246|ring finger protein 115##GQ129333|RNF115|27246|ring finger protein 115##GQ129334|RNF115|27246|ring finger protein 115##NM_001201325|PDZK1|5174|PDZ domain containing 1##NM_001201326|PDZK1|5174|PDZ domain containing 1##NM_002614|PDZK1|5174|PDZ domain containing 1##AK313100|PDZK1|5174|PDZ domain containing 1##AK298269|PDZK1|5174|PDZ domain containing 1##BC006496|PDZK1|5174|PDZ domain containing 1##BC006518|PDZK1|5174|PDZ domain containing 1##AF012281|PDZK1|5174|PDZ domain containing 1##BT006679|GPR89A|653519|G protein-coupled receptor 89A##DQ890650|GPR89B|51463|G protein-coupled receptor 89B##DQ893830|GPR89A|653519|G protein-coupled receptor 89A##BC003187|GPR89A|653519|G protein-coupled receptor 89A##AK316371|GPR89A|653519|G protein-coupled receptor 89A##BC146880|GPR89A|653519|G protein-coupled receptor 89A##AF132947|GPR89A|653519|G protein-coupled receptor 89A##U78723|GPR89B|51463|G protein-coupled receptor 89B##BC067816|GPR89A|653519|G protein-coupled receptor 89A##AB097024|GPR89A|653519|G protein-coupled receptor 89A##AB097025|GPR89A|653519|G protein-coupled receptor 89A##AK223223|GPR89A|653519|G protein-coupled receptor 89A##AK299995|GPR89A|653519|G protein-coupled receptor 89A##AK302266|GPR89B|51463|G protein-coupled receptor 89B##AY358966|GPR89A|653519|G protein-coupled receptor 89A##AK021758|GPR89A|653519|G protein-coupled receptor 89A##AK297145|GPR89A|653519|G protein-coupled receptor 89A##NM_001097612|GPR89A|653519|G protein-coupled receptor 89A##NM_001097613|GPR89A|653519|G protein-coupled receptor 89A	0.0	
chr1	181451831	181451933	reg1034509.p2	3.467	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-394017	+	NM_016545	-394245	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-448732	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	818	+	BC137223 BC137224 AK128654 NM_001009992	578915	-	TSC_hg19_v1_chr1_-_182354649 AK301600	902800	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.0	
chr12	104775926	104776107	reg1001777.p2	3.467	+	TSC_hg19_v1_chr12_+_104697516 NM_001008394 AK098698 BC027612	-78488	+	AK128515 TSC_hg19_v1_chr12_+_104682642 AY344670 AY344671 AY344672 AY344680 AY344094 AY344096 AY344095 AY344678 AF077367 AY344679	-93404	+	D88687 TSC_hg19_v1_chr12_+_104681047 AK295067	-94930	+	TSC_hg19_v1_chr12_+_104850745 NM_001173982 NM_018413 AK313217	74678	+	AK290923 TSC_hg19_v1_chr12_+_104850752	74735	+	TSC_hg19_v1_chr12_+_104850778 BC013315	74755	+	NM_001008394|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK098698|EID3|493861|EP300 interacting inhibitor of differentiation 3##BC027612|EID3|493861|EP300 interacting inhibitor of differentiation 3##AK128515|TXNRD1|7296|thioredoxin reductase 1##AY344670|TXNRD1|7296|thioredoxin reductase 1##AY344096|TXNRD1|7296|thioredoxin reductase 1##AY344095|TXNRD1|7296|thioredoxin reductase 1##AF077367|TXNRD1|7296|thioredoxin reductase 1##AY344679|TXNRD1|7296|thioredoxin reductase 1##D88687|TXNRD1|7296|thioredoxin reductase 1##AK295067|TXNRD1|7296|thioredoxin reductase 1##NM_001173982|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##NM_018413|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK313217|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AK290923|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11	0.0	
chr12	31903615	31903786	reg1033950.p2	3.467	+	TSC_hg19_v1_chr12_-_31882017 BC037897 AK311214 BC045831 NM_001113402	-21644	-	TSC_hg19_v1_chr12_-_31881956 AK123033 AK302112 AK311249 AL833434 BC067906	-21726	-	NM_001135863 TSC_hg19_v1_chr12_+_31812621 AL832339 BC039107	-91086	+	BC066906 HQ873957 NM_001013699 TSC_hg19_v1_chr12_-_31945232	41504	-	TSC_hg19_v1_chr12_+_32112348 NM_018169	208631	+	TSC_hg19_v1_chr12_+_32112382 AK092399 AX747522 BC140819	208694	+	BC037897|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311214|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC045831|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001113402|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK123033|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK302112|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AK311249|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##AL833434|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##BC067906|AMN1|196394|antagonist of mitotic exit network 1 homolog (S. cerevisiae)##NM_001135863|METTL20|254013|methyltransferase like 20##AL832339|METTL20|254013|methyltransferase like 20##BC039107|METTL20|254013|methyltransferase like 20##BC066906|H3F3C|440093|H3 histone, family 3C##HQ873957|H3F3C|440093|H3 histone, family 3C##NM_001013699|H3F3C|440093|H3 histone, family 3C##NM_018169|C12orf35|55196|chromosome 12 open reading frame 35##AK092399|C12orf35|55196|chromosome 12 open reading frame 35##BC140819|C12orf35|55196|chromosome 12 open reading frame 35	0.0	
chr15	83776122	83776196	reg1031722.p2	3.467	+	NM_001011885 NM_025238 TSC_hg19_v1_chr15_-_83736124	-40044	-	TSC_hg19_v1_chr15_-_83736005 BC028097	-40155	-	TSC_hg19_v1_chr15_-_83735995 AB462966 AF529369 AM393763 AY364253 DQ891458 DQ894635 CU688394 BC017464 AK000731 AK225355 AK225362 AF355402 AF257241 AL136853	-40215	-	BC063487 NM_001144903 NM_023003 AF255922 TSC_hg19_v1_chr15_+_83776396 AK223246 AK292100 BC032007 CU687748 DQ021909 AK295568	219	+	AB529208 TSC_hg19_v1_chr15_-_83876576 BC015483 AB029156 AF110642 AF151900 AK001280 NM_016073	100255	-	BC040554 TSC_hg19_v1_chr15_-_83876823	100637	-	NM_001011885|BTBD1|53339|BTB (POZ) domain containing 1##NM_025238|BTBD1|53339|BTB (POZ) domain containing 1##BC028097|BTBD1|53339|BTB (POZ) domain containing 1##AF529369|BTBD1|53339|BTB (POZ) domain containing 1##AM393763|BTBD1|53339|BTB (POZ) domain containing 1##AY364253|BTBD1|53339|BTB (POZ) domain containing 1##DQ891458|BTBD1|53339|BTB (POZ) domain containing 1##DQ894635|BTBD1|53339|BTB (POZ) domain containing 1##BC017464|BTBD1|53339|BTB (POZ) domain containing 1##AK000731|BTBD1|53339|BTB (POZ) domain containing 1##AK225355|BTBD1|53339|BTB (POZ) domain containing 1##AK225362|BTBD1|53339|BTB (POZ) domain containing 1##AF355402|BTBD1|53339|BTB (POZ) domain containing 1##AF257241|BTBD1|53339|BTB (POZ) domain containing 1##AL136853|BTBD1|53339|BTB (POZ) domain containing 1##BC063487|TM6SF1|53346|transmembrane 6 superfamily member 1##NM_001144903|TM6SF1|53346|transmembrane 6 superfamily member 1##NM_023003|TM6SF1|53346|transmembrane 6 superfamily member 1##AF255922|TM6SF1|53346|transmembrane 6 superfamily member 1##AK223246|TM6SF1|53346|transmembrane 6 superfamily member 1##AK292100|TM6SF1|53346|transmembrane 6 superfamily member 1##BC032007|TM6SF1|53346|transmembrane 6 superfamily member 1##DQ021909|TM6SF1|53346|transmembrane 6 superfamily member 1##AK295568|TM6SF1|53346|transmembrane 6 superfamily member 1##BC015483|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AB029156|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AF110642|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AF151900|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##AK001280|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##NM_016073|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3##BC040554|HDGFRP3|50810|hepatoma-derived growth factor, related protein 3	0.0	
chr2	47205473	47205554	reg1044445.p1	3.467	+	TSC_hg19_v1_chr2_-_47168913 NM_001171508 NM_001171511	-36566	-	AK292127 TSC_hg19_v1_chr2_-_47168875 AK293889	-36640	-	TSC_hg19_v1_chr2_+_47168400 BC047709 BC111487	-37110	+	AK097491 NM_001163561 NM_173649	176957	-	TSC_hg19_v1_chr2_-_47403624 M19311 BC003354 BC006464	198113	-	AK315694 BC017385 BC018677 BC026065 D45887 TSC_hg19_v1_chr2_-_47403651	198137	-	NM_001171508|MCFD2|90411|multiple coagulation factor deficiency 2##NM_001171511|MCFD2|90411|multiple coagulation factor deficiency 2##AK292127|MCFD2|90411|multiple coagulation factor deficiency 2##AK293889|MCFD2|90411|multiple coagulation factor deficiency 2##BC111487|TTC7A|57217|tetratricopeptide repeat domain 7A##AK097491|C2orf61|285051|chromosome 2 open reading frame 61##NM_001163561|C2orf61|285051|chromosome 2 open reading frame 61##NM_173649|C2orf61|285051|chromosome 2 open reading frame 61##M19311|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC003354|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC006464|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##AK315694|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC017385|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC018677|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##BC026065|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)##D45887|CALM2|805|calmodulin 2 (phosphorylase kinase, delta)	0.0	
chr3	191018559	191018710	reg1037224.p1	3.467	+	AY398681 AY573933 BC128106 BC128107 NM_198184	-88313	+	NM_001146686	-438170	-	NM_001167928 NM_001167929 NM_001167930 NM_001167931 NM_002182 NM_134470 AK291669 TSC_hg19_v1_chr3_+_190231874 BC053621 AB006537 AF538730 AF538731 AF538732 AF538733 AF538734 EF591790 BC016141	-786757	+	AJ416916 AJ557013 NM_174908 NM_178335 TSC_hg19_v1_chr3_+_191047209 BC065004 CU687992	28532	+	AK090630 AX746546 NM_198152	29690	-	AY858112 NM_001083308	160317	+	AY398681|OSTN|344901|osteocrin##AY573933|OSTN|344901|osteocrin##BC128106|OSTN|344901|osteocrin##BC128107|OSTN|344901|osteocrin##NM_198184|OSTN|344901|osteocrin##NM_001146686|GMNC|647309|geminin coiled-coil domain containing##NM_001167928|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167929|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167930|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_001167931|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_002182|IL1RAP|3556|interleukin 1 receptor accessory protein##NM_134470|IL1RAP|3556|interleukin 1 receptor accessory protein##AK291669|IL1RAP|3556|interleukin 1 receptor accessory protein##BC053621|IL1RAP|3556|interleukin 1 receptor accessory protein##AB006537|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538730|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538731|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538732|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538733|IL1RAP|3556|interleukin 1 receptor accessory protein##AF538734|IL1RAP|3556|interleukin 1 receptor accessory protein##EF591790|IL1RAP|3556|interleukin 1 receptor accessory protein##BC016141|IL1RAP|3556|interleukin 1 receptor accessory protein##AJ416916|CCDC50|152137|coiled-coil domain containing 50##AJ557013|CCDC50|152137|coiled-coil domain containing 50##NM_174908|CCDC50|152137|coiled-coil domain containing 50##NM_178335|CCDC50|152137|coiled-coil domain containing 50##BC065004|CCDC50|152137|coiled-coil domain containing 50##AK090630|UTS2D|257313|urotensin 2 domain containing##NM_198152|UTS2D|257313|urotensin 2 domain containing##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2	0.0	
chr3	195886844	195886942	reg1029914.p1	3.467	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-77877	-	TSC_hg19_v1_chr3_-_195808984 M11507	-77910	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-77932	-	BC034801 BC022078 NM_001039617 AK122907	51388	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	56501	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	127642	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr4	2800836	2801000	reg1026094.p1	3.467	+	AK312286 TSC_hg19_v1_chr4_+_2794811 AK307106	-6096	+	TSC_hg19_v1_chr4_+_2794755 AK225497 NM_001122681 BC022996	-6183	+	AB590678 TSC_hg19_v1_chr4_-_2758064 AJ304866 BC002740 AK096296 AF372839 NM_024309	-42855	-	NM_001145855 TSC_hg19_v1_chr4_+_2813962	13036	+	TSC_hg19_v1_chr4_+_2813973 AK299996 AK304752	13087	+	TSC_hg19_v1_chr4_+_2819914 NM_001145856 U56386	18995	+	AK312286|SH3BP2|6452|SH3-domain binding protein 2##AK307106|SH3BP2|6452|SH3-domain binding protein 2##AK225497|SH3BP2|6452|SH3-domain binding protein 2##NM_001122681|SH3BP2|6452|SH3-domain binding protein 2##BC022996|SH3BP2|6452|SH3-domain binding protein 2##AJ304866|TNIP2|79155|TNFAIP3 interacting protein 2##BC002740|TNIP2|79155|TNFAIP3 interacting protein 2##AK096296|TNIP2|79155|TNFAIP3 interacting protein 2##AF372839|TNIP2|79155|TNFAIP3 interacting protein 2##NM_024309|TNIP2|79155|TNFAIP3 interacting protein 2##NM_001145855|SH3BP2|6452|SH3-domain binding protein 2##AK299996|SH3BP2|6452|SH3-domain binding protein 2##AK304752|SH3BP2|6452|SH3-domain binding protein 2##NM_001145856|SH3BP2|6452|SH3-domain binding protein 2##U56386|SH3BP2|6452|SH3-domain binding protein 2	0.0	
chr5	10358099	10358215	reg1044561.p2	3.467	+	TSC_hg19_v1_chr5_+_10354003 AB385356	-4149	+	TSC_hg19_v1_chr5_+_10353836 AK000970 BC136461 BC136462 BC142679 BC142694	-4293	+	TSC_hg19_v1_chr5_+_10353827 AK300034 BC111494 AB011169 AK296585 AK299339 NM_005885	-4343	+	NM_001201466 NM_031916 TSC_hg19_v1_chr5_+_10442034 BC014607	83846	+	TSC_hg19_v1_chr5_+_10442085 AK098642 AF239723	83995	+	TSC_hg19_v1_chr5_+_10564441 NM_001164440	206285	+	AK000970|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC136461|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC136462|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC142679|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC142694|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##AK300034|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##BC111494|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##AB011169|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##AK296585|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##AK299339|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##NM_005885|MARCH6|10299|membrane-associated ring finger (C3HC4) 6##NM_001201466|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_031916|ROPN1L|83853|rhophilin associated tail protein 1-like##BC014607|ROPN1L|83853|rhophilin associated tail protein 1-like##AK098642|ROPN1L|83853|rhophilin associated tail protein 1-like##AF239723|ROPN1L|83853|rhophilin associated tail protein 1-like##NM_001164440|ANKRD33B|651746|ankyrin repeat domain 33B	0.042456	
chr8	126929458	126929548	reg1038437.p1	3.467	+	TSC_hg19_v1_chr8_+_126442581 BC063292 NM_025195	-486924	+	NM_173685 TSC_hg19_v1_chr8_+_126104111 BC032797 AK057002	-825406	+	TSC_hg19_v1_chr8_-_126104047 NM_014846	-825446	-	TSC_hg19_v1_chr8_-_126963395 BX648371	33910	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	641052	-	NM_174911 TSC_hg19_v1_chr8_-_127570724	641221	-	BC063292|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_025195|TRIB1|10221|tribbles homolog 1 (Drosophila)##NM_173685|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##BC032797|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##AK057002|NSMCE2|286053|non-SMC element 2, MMS21 homolog (S. cerevisiae)##NM_014846|KIAA0196|9897|KIAA0196##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B	0.811679	CTCF.p2:14:0.812
chr8	66776990	66777067	reg1043913.p2	3.467	+	TSC_hg19_v1_chr8_-_66754300 AK292680	-22736	-	NM_001242318	-23060	-	HQ258418 AK290801 BC058025 BC126360 NM_002603 U67932	-75777	-	NM_033105 BC016742 AF368276 AL133660	156791	+	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	262312	+	BC002599 BC011031 AK075431 NM_000756	313739	-	AK292680|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##HQ258418|PDE7A|5150|phosphodiesterase 7A##AK290801|PDE7A|5150|phosphodiesterase 7A##BC058025|PDE7A|5150|phosphodiesterase 7A##BC126360|PDE7A|5150|phosphodiesterase 7A##NM_002603|PDE7A|5150|phosphodiesterase 7A##U67932|PDE7A|5150|phosphodiesterase 7A##NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone	0.959405	CTCF.p2:-20:0.959
chr9	138114469	138114550	reg1032422.p2	3.467	+	AK290478 TSC_hg19_v1_chr9_+_137979513	-134995	+	TSC_hg19_v1_chr9_+_137967404 AK289921 CU679089 BT007146	-147018	+	BC008763 BC011741 TSC_hg19_v1_chr9_+_137967372 AK289719	-147136	+	TSC_hg19_v1_chr9_+_138371663 AB014549 NM_014811	257141	+	AY927868 DQ892784 DQ896031 NM_001048265 NM_144654	277219	-	TSC_hg19_v1_chr9_+_138392535 NM_016034 BC008017 BC013108 AB055388 AF151849	278004	+	AK290478|OLFM1|10439|olfactomedin 1##AK289921|OLFM1|10439|olfactomedin 1##BT007146|OLFM1|10439|olfactomedin 1##BC008763|OLFM1|10439|olfactomedin 1##BC011741|OLFM1|10439|olfactomedin 1##AK289719|OLFM1|10439|olfactomedin 1##AB014549|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##NM_014811|PPP1R26|9858|protein phosphatase 1, regulatory subunit 26##AY927868|C9orf116|138162|chromosome 9 open reading frame 116##DQ892784|C9orf116|138162|chromosome 9 open reading frame 116##DQ896031|C9orf116|138162|chromosome 9 open reading frame 116##NM_001048265|C9orf116|138162|chromosome 9 open reading frame 116##NM_144654|C9orf116|138162|chromosome 9 open reading frame 116##NM_016034|MRPS2|51116|mitochondrial ribosomal protein S2##BC008017|MRPS2|51116|mitochondrial ribosomal protein S2##BC013108|MRPS2|51116|mitochondrial ribosomal protein S2##AB055388|MRPS2|51116|mitochondrial ribosomal protein S2##AF151849|MRPS2|51116|mitochondrial ribosomal protein S2	0.0	
chrX	81932365	81932452	reg1023006.p2	3.467	+	TSC_hg19_v1_chrX_+_80457600 BC016709 AL136718 AK129610 AF042081 AK310011 AB590910 CR533478	-1474760	+	TSC_hg19_v1_chrX_+_80457572 AK309351	-1474832	+	AK094058 AX748432 NM_030763	-1474968	-	AK314967 NM_000307 TSC_hg19_v1_chrX_+_82763302 X82324 AB464667	830891	+	BC021669 BC058019 BC070355 BC126461 NM_021118 HQ258477	1183763	+	AB587525 CR536566 AK313240 BC143647 BC143648 NM_014496 TSC_hg19_v1_chrX_-_83443024	1510564	-	BC016709|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AL136718|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK129610|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AF042081|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK310011|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##CR533478|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK309351|SH3BGRL|6451|SH3 domain binding glutamic acid-rich protein like##AK094058|HMGN5|79366|high mobility group nucleosome binding domain 5##NM_030763|HMGN5|79366|high mobility group nucleosome binding domain 5##AK314967|POU3F4|5456|POU class 3 homeobox 4##NM_000307|POU3F4|5456|POU class 3 homeobox 4##X82324|POU3F4|5456|POU class 3 homeobox 4##BC021669|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC058019|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC070355|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##BC126461|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##NM_021118|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##HQ258477|CYLC1|1538|cylicin, basic protein of sperm head cytoskeleton 1##CR536566|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##AK313240|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143647|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##BC143648|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6##NM_014496|RPS6KA6|27330|ribosomal protein S6 kinase, 90kDa, polypeptide 6	0.0	
chr10	27649393	27649573	reg1001580.p1	3.466	+	TSC_hg19_v1_chr10_-_27531041 AK057469 AF505653 NM_001042473	-118401	-	TSC_hg19_v1_chr10_-_27531030 AB082527	-118468	-	TSC_hg19_v1_chr10_-_27529416 CU688904 AK295031 AK304842 BC025309 BC030555 BC011364 AK294510 NM_145698	-119939	-	JF332167 BC107139 AK126025 NM_001034842	53754	-	TSC_hg19_v1_chr10_+_27793232 AY574034 AK295443 AK297629 AK299457 BC029350 AF087860 BC015014 NM_021252 AL136734 AK223153 AB464117 AF137372 AF498950 AK001555 AM393142 BT009840 CR533455 CU677165	143746	+	BC036207 TSC_hg19_v1_chr10_-_28034752 AK125339 NM_001242702 NM_173576	385278	-	AK057469|ACBD5|91452|acyl-CoA binding domain containing 5##AF505653|ACBD5|91452|acyl-CoA binding domain containing 5##NM_001042473|ACBD5|91452|acyl-CoA binding domain containing 5##AB082527|ACBD5|91452|acyl-CoA binding domain containing 5##AK295031|ACBD5|91452|acyl-CoA binding domain containing 5##AK304842|ACBD5|91452|acyl-CoA binding domain containing 5##BC025309|ACBD5|91452|acyl-CoA binding domain containing 5##BC030555|ACBD5|91452|acyl-CoA binding domain containing 5##BC011364|ACBD5|91452|acyl-CoA binding domain containing 5##AK294510|ACBD5|91452|acyl-CoA binding domain containing 5##NM_145698|ACBD5|91452|acyl-CoA binding domain containing 5##JF332167|PTCHD3|374308|patched domain containing 3##BC107139|PTCHD3|374308|patched domain containing 3##AK126025|PTCHD3|374308|patched domain containing 3##NM_001034842|PTCHD3|374308|patched domain containing 3##AY574034|RAB18|22931|RAB18, member RAS oncogene family##AK295443|RAB18|22931|RAB18, member RAS oncogene family##AK297629|RAB18|22931|RAB18, member RAS oncogene family##AK299457|RAB18|22931|RAB18, member RAS oncogene family##BC029350|RAB18|22931|RAB18, member RAS oncogene family##AF087860|RAB18|22931|RAB18, member RAS oncogene family##BC015014|RAB18|22931|RAB18, member RAS oncogene family##NM_021252|RAB18|22931|RAB18, member RAS oncogene family##AL136734|RAB18|22931|RAB18, member RAS oncogene family##AK223153|RAB18|22931|RAB18, member RAS oncogene family##AF137372|RAB18|22931|RAB18, member RAS oncogene family##AF498950|RAB18|22931|RAB18, member RAS oncogene family##AK001555|RAB18|22931|RAB18, member RAS oncogene family##AM393142|RAB18|22931|RAB18, member RAS oncogene family##BT009840|RAB18|22931|RAB18, member RAS oncogene family##CR533455|RAB18|22931|RAB18, member RAS oncogene family##BC036207|MKX|283078|mohawk homeobox##AK125339|MKX|283078|mohawk homeobox##NM_001242702|MKX|283078|mohawk homeobox##NM_173576|MKX|283078|mohawk homeobox	0.0	
chr10	82638444	82638531	reg1038379.p1	3.466	+	AK123978 NM_001145719	-337913	+	AK123885 NM_207372	-340830	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-424383	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	996595	+	DQ857894 NM_001165973	998955	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3260770	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.0	
chr13	77420190	77420307	reg1041918.p1	3.466	+	NM_015842 TSC_hg19_v1_chr13_+_76334854 AK304051 AB020665	-1085408	+	TSC_hg19_v1_chr13_+_76210470 AK092052 AX747335	-1209778	+	AF330045 NM_005358	-1225679	+	BC013764 TSC_hg19_v1_chr13_-_77460431	40152	-	TSC_hg19_v1_chr13_-_77460541 AF359381 AK128363 AK311268 AK311543 NM_138444	40359	-	TSC_hg19_v1_chr13_+_77566215 NM_006493 AB528107 AK075109 AK304001	145921	+	NM_015842|LMO7|4008|LIM domain 7##AK304051|LMO7|4008|LIM domain 7##AB020665|LMO7|4008|LIM domain 7##AK092052|LMO7|4008|LIM domain 7##AF330045|LMO7|4008|LIM domain 7##NM_005358|LMO7|4008|LIM domain 7##BC013764|KCTD12|115207|potassium channel tetramerisation domain containing 12##AF359381|KCTD12|115207|potassium channel tetramerisation domain containing 12##AK128363|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_138444|KCTD12|115207|potassium channel tetramerisation domain containing 12##NM_006493|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK075109|CLN5|1203|ceroid-lipofuscinosis, neuronal 5##AK304001|CLN5|1203|ceroid-lipofuscinosis, neuronal 5	0.0	
chr1	38538666	38538732	reg1032009.p1	3.466	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-26250	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-60269	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-60314	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	786687	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	800317	-	AK312811 BC051675 AK123051 NM_030772	808578	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.102229	
chr15	90743852	90743974	reg1029409.p1	3.466	+	TSC_hg19_v1_chr15_+_90728151 NM_020210 AK289991 AY358392	-15717	+	TSC_hg19_v1_chr15_-_90645713 AK312627	-98186	-	TSC_hg19_v1_chr15_-_90645704 NM_002168 X69433	-98208	-	TSC_hg19_v1_chr15_+_90744561 AY445887 NM_198925 AB051532 BC126438 BC144141 BC110853 AB385501 HQ258520 AK026108	777	+	TSC_hg19_v1_chr15_-_90777138 AB451276 AB451406 AB463454 CR456955 DQ891196 DQ894379	33215	-	TSC_hg19_v1_chr15_-_90777174 BC000846 U85611 U82226	33252	-	NM_020210|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK289991|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AY358392|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK312627|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##NM_002168|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##X69433|IDH2|3418|isocitrate dehydrogenase 2 (NADP+), mitochondrial##AY445887|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##NM_198925|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB051532|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC126438|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC144141|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##BC110853|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##HQ258520|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AK026108|SEMA4B|10509|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B##AB451276|CIB1|10519|calcium and integrin binding 1 (calmyrin)##AB451406|CIB1|10519|calcium and integrin binding 1 (calmyrin)##CR456955|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ891196|CIB1|10519|calcium and integrin binding 1 (calmyrin)##DQ894379|CIB1|10519|calcium and integrin binding 1 (calmyrin)##BC000846|CIB1|10519|calcium and integrin binding 1 (calmyrin)##U85611|CIB1|10519|calcium and integrin binding 1 (calmyrin)##U82226|CIB1|10519|calcium and integrin binding 1 (calmyrin)	0.0	
chr16	85936345	85936489	reg1039109.p1	3.466	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-3631	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-103082	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-103112	+	TSC_hg19_v1_chr16_-_86542463 AK091834	606047	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	607739	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	607823	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.223862	CTCF.p2:-37:0.224
chr6	42136511	42136621	reg1040698.p2	3.466	+	AK313865 NM_000409 BC031663 AK125780	-13403	+	NM_001164446	-25852	-	TSC_hg19_v1_chr6_+_42018268 BC018796 AF465841 CU689710	-118295	+	BX537393 NM_002098	26127	-	CU680358 AK298219 TSC_hg19_v1_chr6_-_42185591 AF113220 AF277180 AK098446	49024	-	TSC_hg19_v1_chr6_-_42185597 AK316599 BC012560	49031	-	AK313865|GUCA1A|2978|guanylate cyclase activator 1A (retina)##NM_000409|GUCA1A|2978|guanylate cyclase activator 1A (retina)##BC031663|GUCA1A|2978|guanylate cyclase activator 1A (retina)##AK125780|GUCA1A|2978|guanylate cyclase activator 1A (retina)##NM_001164446|C6orf132|647024|chromosome 6 open reading frame 132##BC018796|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##AF465841|TAF8|129685|TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa##BX537393|GUCA1B|2979|guanylate cyclase activator 1B (retina)##NM_002098|GUCA1B|2979|guanylate cyclase activator 1B (retina)##AK298219|MRPS10|55173|mitochondrial ribosomal protein S10##AF113220|MRPS10|55173|mitochondrial ribosomal protein S10##AF277180|MRPS10|55173|mitochondrial ribosomal protein S10##AK098446|MRPS10|55173|mitochondrial ribosomal protein S10##AK316599|MRPS10|55173|mitochondrial ribosomal protein S10##BC012560|MRPS10|55173|mitochondrial ribosomal protein S10	0.082038	
chr6	76603190	76603297	reg1034846.p1	3.466	+	TSC_hg19_v1_chr6_+_76458996 AB002387 BC146764	-144234	+	TSC_hg19_v1_chr6_+_76458926 NM_004999 BX647397 BC012598	-144327	+	AF307849 AB018340 TSC_hg19_v1_chr6_+_76312226 AF306508 AF196304	-291035	+	HQ258361 BC117450 BC117452 AF047492 NM_001563 CR749572 DQ426878	179056	-	BC069065 BC096206 BC096207 BC096208 NM_000863 AB464442 M81590	1569906	-	NM_001010844 TSC_hg19_v1_chr6_+_79577263 BC112253 BC112255 AB463803 AK309003	2974012	+	AB002387|MYO6|4646|myosin VI##BC146764|MYO6|4646|myosin VI##NM_004999|MYO6|4646|myosin VI##BX647397|MYO6|4646|myosin VI##BC012598|MYO6|4646|myosin VI##AF307849|SENP6|26054|SUMO1/sentrin specific peptidase 6##AB018340|SENP6|26054|SUMO1/sentrin specific peptidase 6##AF306508|SENP6|26054|SUMO1/sentrin specific peptidase 6##AF196304|SENP6|26054|SUMO1/sentrin specific peptidase 6##HQ258361|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117450|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC117452|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##AF047492|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##NM_001563|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##CR749572|IMPG1|3617|interphotoreceptor matrix proteoglycan 1##BC069065|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096206|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096207|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##BC096208|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_000863|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##M81590|HTR1B|3351|5-hydroxytryptamine (serotonin) receptor 1B##NM_001010844|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112253|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##BC112255|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1##AK309003|IRAK1BP1|134728|interleukin-1 receptor-associated kinase 1 binding protein 1	0.988519	CTCF.p2:-16:0.989
chr7	127660386	127660502	reg1041426.p1	3.466	+	BC017180 TSC_hg19_v1_chr7_+_127292247 AK096583 AK304181 AK312313 AB209510 AB384959 DQ893632 DQ895529 BT009785	-368108	+	TSC_hg19_v1_chr7_+_127292236 AY273894 U22055	-368208	+	TSC_hg19_v1_chr7_+_127292198 NM_014390	-368262	+	BC111561 BC111745 AF196976 AJ297858 NM_022143 AK172751 TSC_hg19_v1_chr7_-_127671066 AK314047	10592	-	NM_000230 U43653 TSC_hg19_v1_chr7_+_127881332 AK313553 BC060830 BC069323 BC069452 BC069527	220889	+	CU680694 TSC_hg19_v1_chr7_-_127983862	323410	-	BC017180|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK096583|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK304181|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AK312313|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AB209510|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ893632|SND1|27044|staphylococcal nuclease and tudor domain containing 1##DQ895529|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BT009785|SND1|27044|staphylococcal nuclease and tudor domain containing 1##AY273894|SND1|27044|staphylococcal nuclease and tudor domain containing 1##U22055|SND1|27044|staphylococcal nuclease and tudor domain containing 1##NM_014390|SND1|27044|staphylococcal nuclease and tudor domain containing 1##BC111561|LRRC4|64101|leucine rich repeat containing 4##BC111745|LRRC4|64101|leucine rich repeat containing 4##AF196976|LRRC4|64101|leucine rich repeat containing 4##AJ297858|LRRC4|64101|leucine rich repeat containing 4##NM_022143|LRRC4|64101|leucine rich repeat containing 4##AK172751|LRRC4|64101|leucine rich repeat containing 4##AK314047|LRRC4|64101|leucine rich repeat containing 4##NM_000230|LEP|3952|leptin##U43653|LEP|3952|leptin##AK313553|LEP|3952|leptin##BC060830|LEP|3952|leptin##BC069323|LEP|3952|leptin##BC069452|LEP|3952|leptin##BC069527|LEP|3952|leptin	1.809429	CTCF.p2:-23:0.851	CTCF.p2:-65:0.958
chr9	113841213	113841312	reg1031363.p2	3.466	+	TSC_hg19_v1_chr9_-_113801481 AK290287	-39760	-	AK298590 TSC_hg19_v1_chr9_-_113801086	-40229	-	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	-40850	-	BC111086 NM_205859	249450	-	TSC_hg19_v1_chr9_-_114245830 AK308313	404566	-	TSC_hg19_v1_chr9_-_114246233 AK122712	405003	-	AK290287|LPAR1|1902|lysophosphatidic acid receptor 1##AK298590|LPAR1|1902|lysophosphatidic acid receptor 1##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1##BC111086|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2##NM_205859|OR2K2|26248|olfactory receptor, family 2, subfamily K, member 2##AK308313|KIAA0368|23392|KIAA0368##AK122712|KIAA0368|23392|KIAA0368	0.0	
chr9	37026350	37026450	reg1039637.p1	3.466	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-453476	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-625225	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-625503	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	8016	-	TSC_hg19_v1_chr9_+_37079908 AK091718	53506	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	53608	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.0	
chr11	118966082	118966215	reg1033133.p2	3.465	+	CR457079 AB464561 BC013416 BC004915 BC011694 TSC_hg19_v1_chr11_-_118966173	-10	-	BX647328 NM_001024382 X04217	-7438	+	TSC_hg19_v1_chr11_+_118955594 NM_000190 AK290275 AK309544 AK310343 BC000520 BC019323 AK000628 D28419 AK131072 BC008149 X04808 CU678879	-10493	+	TSC_hg19_v1_chr11_-_118966176 NM_002105 X14850	27	-	AK225994 BC000325 BC047771 BC008817 TSC_hg19_v1_chr11_-_118972586 AK301973 AK312783	6410	-	NM_001382 AK095718	6669	-	CR457079|H2AFX|3014|H2A histone family, member X##BC013416|H2AFX|3014|H2A histone family, member X##BC004915|H2AFX|3014|H2A histone family, member X##BC011694|H2AFX|3014|H2A histone family, member X##BX647328|HMBS|3145|hydroxymethylbilane synthase##NM_001024382|HMBS|3145|hydroxymethylbilane synthase##X04217|HMBS|3145|hydroxymethylbilane synthase##NM_000190|HMBS|3145|hydroxymethylbilane synthase##AK290275|HMBS|3145|hydroxymethylbilane synthase##AK309544|HMBS|3145|hydroxymethylbilane synthase##AK310343|HMBS|3145|hydroxymethylbilane synthase##BC000520|HMBS|3145|hydroxymethylbilane synthase##BC019323|HMBS|3145|hydroxymethylbilane synthase##AK000628|HMBS|3145|hydroxymethylbilane synthase##D28419|HMBS|3145|hydroxymethylbilane synthase##AK131072|HMBS|3145|hydroxymethylbilane synthase##BC008149|HMBS|3145|hydroxymethylbilane synthase##X04808|HMBS|3145|hydroxymethylbilane synthase##NM_002105|H2AFX|3014|H2A histone family, member X##X14850|H2AFX|3014|H2A histone family, member X##AK225994|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##BC000325|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##BC047771|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##AK301973|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##AK312783|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##NM_001382|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)##AK095718|DPAGT1|1798|dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)	0.0	
chr1	45696358	45696463	reg1038504.p1	3.465	+	TSC_hg19_v1_chr1_-_45672278 AB040944 NM_020883	-24159	-	TSC_hg19_v1_chr1_+_45478442 AK293702	-217959	+	TSC_hg19_v1_chr1_+_45477917 AF104421 AF104422 AF104423 AF104424 AF104425 AF104426 AF104427 AF104428 AF104429 AF104430 AF104431 AF104432 AF104433 AF104434 AF104435 AF104436 AF104437 AF104438 AF104439 AF104440 AK295284 M14016 BX647308 AK225053 AK308996 DQ890688 DQ893870 AB529048 BT006737 CR456976 CR542057	-218484	+	TSC_hg19_v1_chr1_+_45769564 BC035497	73165	+	NM_032756 BC007293	96150	+	AY169960 NM_025077 TSC_hg19_v1_chr1_+_45805393	108975	+	AB040944|ZSWIM5|57643|zinc finger, SWIM-type containing 5##NM_020883|ZSWIM5|57643|zinc finger, SWIM-type containing 5##AK293702|UROD|7389|uroporphyrinogen decarboxylase##AF104421|UROD|7389|uroporphyrinogen decarboxylase##AF104422|UROD|7389|uroporphyrinogen decarboxylase##AF104423|UROD|7389|uroporphyrinogen decarboxylase##AF104424|UROD|7389|uroporphyrinogen decarboxylase##AF104425|UROD|7389|uroporphyrinogen decarboxylase##AF104426|UROD|7389|uroporphyrinogen decarboxylase##AF104427|UROD|7389|uroporphyrinogen decarboxylase##AF104428|UROD|7389|uroporphyrinogen decarboxylase##AF104429|UROD|7389|uroporphyrinogen decarboxylase##AF104430|UROD|7389|uroporphyrinogen decarboxylase##AF104431|UROD|7389|uroporphyrinogen decarboxylase##AF104432|UROD|7389|uroporphyrinogen decarboxylase##AF104433|UROD|7389|uroporphyrinogen decarboxylase##AF104434|UROD|7389|uroporphyrinogen decarboxylase##AF104435|UROD|7389|uroporphyrinogen decarboxylase##AF104436|UROD|7389|uroporphyrinogen decarboxylase##AF104437|UROD|7389|uroporphyrinogen decarboxylase##AF104438|UROD|7389|uroporphyrinogen decarboxylase##AF104439|UROD|7389|uroporphyrinogen decarboxylase##AF104440|UROD|7389|uroporphyrinogen decarboxylase##AK295284|UROD|7389|uroporphyrinogen decarboxylase##M14016|UROD|7389|uroporphyrinogen decarboxylase##BX647308|UROD|7389|uroporphyrinogen decarboxylase##AK225053|UROD|7389|uroporphyrinogen decarboxylase##AK308996|UROD|7389|uroporphyrinogen decarboxylase##DQ890688|UROD|7389|uroporphyrinogen decarboxylase##DQ893870|UROD|7389|uroporphyrinogen decarboxylase##BT006737|UROD|7389|uroporphyrinogen decarboxylase##CR456976|UROD|7389|uroporphyrinogen decarboxylase##CR542057|UROD|7389|uroporphyrinogen decarboxylase##BC035497|LOC400752|400752|uncharacterized LOC400752##NM_032756|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##BC007293|HPDL|84842|4-hydroxyphenylpyruvate dioxygenase-like##AY169960|TOE1|114034|target of EGR1, member 1 (nuclear)##NM_025077|TOE1|114034|target of EGR1, member 1 (nuclear)	0.405749	CTCF.p2:9:0.406
chr14	98051022	98051124	reg1037822.p1	3.465	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-787358	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-1082289	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-1082327	+	AK098639 NM_182560	1126876	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	1686544	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	1686817	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.0	
chr15	43093375	43093475	reg1034109.p2	3.465	+	TSC_hg19_v1_chr15_-_43029327 AF525398 NM_138477	-64058	-	TSC_hg19_v1_chr15_-_43029313 BC052568 BC066640	-64205	-	TSC_hg19_v1_chr15_+_42867803 CR627426 NM_020759	-225618	+	AF525400 TSC_hg19_v1_chr15_-_43212975 AK131372 BC041876 NM_173500 BC071556	119557	-	AF525401 AY061886 AK292516 TSC_hg19_v1_chr15_-_43398234 AK056441 NM_174916 BC113505 BC113507 AK302489	304814	-	TSC_hg19_v1_chr15_-_43408716 D28374	315284	-	AF525398|CDAN1|146059|congenital dyserythropoietic anemia, type I##NM_138477|CDAN1|146059|congenital dyserythropoietic anemia, type I##BC052568|CDAN1|146059|congenital dyserythropoietic anemia, type I##BC066640|CDAN1|146059|congenital dyserythropoietic anemia, type I##NM_020759|STARD9|57519|StAR-related lipid transfer (START) domain containing 9##AF525400|TTBK2|146057|tau tubulin kinase 2##AK131372|TTBK2|146057|tau tubulin kinase 2##BC041876|TTBK2|146057|tau tubulin kinase 2##NM_173500|TTBK2|146057|tau tubulin kinase 2##BC071556|TTBK2|146057|tau tubulin kinase 2##AF525401|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##AY061886|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##AK292516|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##AK056441|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##NM_174916|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##BC113505|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##BC113507|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##AK302489|UBR1|197131|ubiquitin protein ligase E3 component n-recognin 1##D28374|RPS3A|6189|ribosomal protein S3A	0.807734	CTCF.p2:18:0.808
chr19	15559541	15559607	reg1045375.p1	3.465	+	AK122890 TSC_hg19_v1_chr19_-_15543534	-16029	-	TSC_hg19_v1_chr19_-_15529834 NM_014371 AK295956	-29740	-	DQ891853 DQ895043 TSC_hg19_v1_chr19_-_15529792 AB015332 AB025905 AJ243467 BC000713 AK001594 AK094736 AK225046 AK225291 AK310990	-29799	-	AK131404 NM_021241 TSC_hg19_v1_chr19_-_15560872	1244	-	AK024488 TSC_hg19_v1_chr19_-_15575356 AK122587 NM_022904	15793	-	BC136551 BC136552 BC144238 AF384856 AY358156 TSC_hg19_v1_chr19_-_15590313 AK289415 AB073610 AK055882 NM_052890	30685	-	AK122890|WIZ|58525|widely interspaced zinc finger motifs##NM_014371|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK295956|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##DQ891853|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##DQ895043|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AB015332|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AB025905|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AJ243467|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##BC000713|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK001594|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK094736|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK225046|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK225291|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK310990|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK131404|WIZ|58525|widely interspaced zinc finger motifs##NM_021241|WIZ|58525|widely interspaced zinc finger motifs##AK024488|RASAL3|64926|RAS protein activator like 3##AK122587|RASAL3|64926|RAS protein activator like 3##NM_022904|RASAL3|64926|RAS protein activator like 3##BC136551|PGLYRP2|114770|peptidoglycan recognition protein 2##BC136552|PGLYRP2|114770|peptidoglycan recognition protein 2##BC144238|PGLYRP2|114770|peptidoglycan recognition protein 2##AF384856|PGLYRP2|114770|peptidoglycan recognition protein 2##AY358156|PGLYRP2|114770|peptidoglycan recognition protein 2##AK289415|PGLYRP2|114770|peptidoglycan recognition protein 2##AB073610|PGLYRP2|114770|peptidoglycan recognition protein 2##AK055882|PGLYRP2|114770|peptidoglycan recognition protein 2##NM_052890|PGLYRP2|114770|peptidoglycan recognition protein 2	0.0	
chr19	8261639	8261762	reg1030774.p2	3.465	+	AB384635 AB053450 BC153882 NM_032447	-49325	-	BC130561 BC144463 HQ258070 AB046579 BC125136 U86358 TSC_hg19_v1_chr19_+_8118008	-143753	+	AK292662 NM_001201359 NM_005624	-144055	+	TSC_hg19_v1_chr19_+_8274253 NM_024552 AK222621 AK225394 AK022151 BC063621	12548	+	TSC_hg19_v1_chr19_-_8373195 CR457174 EU831651 BC036814 BC007083 AY358420 AL365455 BC000668 AK222623 AK315656 AL136652 AK058014 AF161254 NM_001165895 NM_016579	111509	-	TSC_hg19_v1_chr19_-_8386260 AF050637 CR456915 CR542266 BC107892 AF054178	124557	-	AB053450|FBN3|84467|fibrillin 3##BC153882|FBN3|84467|fibrillin 3##NM_032447|FBN3|84467|fibrillin 3##BC130561|CCL25|6370|chemokine (C-C motif) ligand 25##BC144463|CCL25|6370|chemokine (C-C motif) ligand 25##HQ258070|CCL25|6370|chemokine (C-C motif) ligand 25##AB046579|CCL25|6370|chemokine (C-C motif) ligand 25##BC125136|CCL25|6370|chemokine (C-C motif) ligand 25##U86358|CCL25|6370|chemokine (C-C motif) ligand 25##AK292662|CCL25|6370|chemokine (C-C motif) ligand 25##NM_001201359|CCL25|6370|chemokine (C-C motif) ligand 25##NM_005624|CCL25|6370|chemokine (C-C motif) ligand 25##NM_024552|CERS4|79603|ceramide synthase 4##AK222621|CERS4|79603|ceramide synthase 4##AK225394|CERS4|79603|ceramide synthase 4##AK022151|CERS4|79603|ceramide synthase 4##BC063621|CERS4|79603|ceramide synthase 4##CR457174|CD320|51293|CD320 molecule##EU831651|CD320|51293|CD320 molecule##BC036814|CD320|51293|CD320 molecule##BC007083|CD320|51293|CD320 molecule##AY358420|CD320|51293|CD320 molecule##AL365455|CD320|51293|CD320 molecule##BC000668|CD320|51293|CD320 molecule##AK222623|CD320|51293|CD320 molecule##AK315656|CD320|51293|CD320 molecule##AL136652|CD320|51293|CD320 molecule##AK058014|CD320|51293|CD320 molecule##AF161254|CD320|51293|CD320 molecule##NM_001165895|CD320|51293|CD320 molecule##NM_016579|CD320|51293|CD320 molecule##AF050637|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR456915|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##CR542266|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##BC107892|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa##AF054178|NDUFA7|4701|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 7, 14.5kDa	0.0	
chr20	3049935	3050017	reg1041500.p1	3.465	+	TSC_hg19_v1_chr20_+_3026675 NM_030811 BC013018 AF308301	-23282	+	AF036330 NM_001501 NM_178331 NM_178332 BC069362 BC115399 BC115400	-25709	+	TSC_hg19_v1_chr20_+_2944935 CU693258 DQ891155 DQ894334	-105050	+	BC069144 NM_000915 BC101841 BC101843 M25650 AB463993 M62611	2343	+	X03173 TSC_hg19_v1_chr20_+_3052956	2921	+	AF031476 M25647 X03172 BC126196 BC126224 BC018062 NM_000490	15376	-	NM_030811|MRPS26|64949|mitochondrial ribosomal protein S26##BC013018|MRPS26|64949|mitochondrial ribosomal protein S26##AF308301|MRPS26|64949|mitochondrial ribosomal protein S26##AF036330|GNRH2|2797|gonadotropin-releasing hormone 2##NM_001501|GNRH2|2797|gonadotropin-releasing hormone 2##NM_178331|GNRH2|2797|gonadotropin-releasing hormone 2##NM_178332|GNRH2|2797|gonadotropin-releasing hormone 2##BC069362|GNRH2|2797|gonadotropin-releasing hormone 2##BC115399|GNRH2|2797|gonadotropin-releasing hormone 2##BC115400|GNRH2|2797|gonadotropin-releasing hormone 2##DQ891155|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##DQ894334|PTPRA|5786|protein tyrosine phosphatase, receptor type, A##BC069144|OXT|5020|oxytocin, prepropeptide##NM_000915|OXT|5020|oxytocin, prepropeptide##BC101841|OXT|5020|oxytocin, prepropeptide##BC101843|OXT|5020|oxytocin, prepropeptide##M25650|OXT|5020|oxytocin, prepropeptide##M62611|OXT|5020|oxytocin, prepropeptide##X03173|OXT|5020|oxytocin, prepropeptide##AF031476|AVP|551|arginine vasopressin##M25647|AVP|551|arginine vasopressin##X03172|AVP|551|arginine vasopressin##BC126196|AVP|551|arginine vasopressin##BC126224|AVP|551|arginine vasopressin##BC018062|AVP|551|arginine vasopressin##NM_000490|AVP|551|arginine vasopressin	0.082681	
chr22	32012303	32012373	reg1030507.p1	3.465	+	BC033613 TSC_hg19_v1_chr22_+_32010180	-2172	+	TSC_hg19_v1_chr22_+_31892521 BC110814 AK292408 BC041101	-119792	+	BC129926 BC129945 TSC_hg19_v1_chr22_+_31892499 AK303362 AK293987	-119897	+	TSC_hg19_v1_chr22_-_32026821 BC001482 NM_014338	14494	-	TSC_hg19_v1_chr22_-_32058202 AB528208 CU013140 CU013428 CR456540 DQ656048	45870	-	NM_173566 TSC_hg19_v1_chr22_-_32146119	133790	-	BC033613|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC110814|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK292408|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC041101|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC129926|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC129945|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK303362|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK293987|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC001482|PISD|23761|phosphatidylserine decarboxylase##NM_014338|PISD|23761|phosphatidylserine decarboxylase##CU013140|PISD|23761|phosphatidylserine decarboxylase##CU013428|PISD|23761|phosphatidylserine decarboxylase##CR456540|PISD|23761|phosphatidylserine decarboxylase##NM_173566|PRR14L|253143|proline rich 14-like	0.0	
chr3	146486838	146486935	reg1037085.p2	3.465	+	AY436642 NM_001085420	-162884	-	BC157886 BC171917 TSC_hg19_v1_chr3_-_146323105	-163819	-	TSC_hg19_v1_chr3_-_146262505 AF098642 AB006746 NM_021105	-224362	-	BC041954 TSC_hg19_v1_chr3_+_147111244	624346	+	AK294831 NM_001168378	635184	-	AK293981 NM_001168379	636420	-	AY436642|PLSCR5|389158|phospholipid scramblase family, member 5##NM_001085420|PLSCR5|389158|phospholipid scramblase family, member 5##BC157886|PLSCR5|389158|phospholipid scramblase family, member 5##BC171917|PLSCR5|389158|phospholipid scramblase family, member 5##AF098642|PLSCR1|5359|phospholipid scramblase 1##AB006746|PLSCR1|5359|phospholipid scramblase 1##NM_021105|PLSCR1|5359|phospholipid scramblase 1##AK294831|ZIC4|84107|Zic family member 4##NM_001168378|ZIC4|84107|Zic family member 4##AK293981|ZIC4|84107|Zic family member 4##NM_001168379|ZIC4|84107|Zic family member 4	0.0	
chr3	189405345	189405501	reg1038591.p1	3.465	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-56164	+	AK125682 NM_198485 BC101550 BC101552	-515612	+	TSC_hg19_v1_chr3_+_188664993 AK123232	-740453	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	102095	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	433272	-	NM_018192	433484	-	BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK123232|TPRG1|285386|tumor protein p63 regulated 1##AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1	0.96952	CTCF.p2:21:0.970
chr3	50689932	50690091	reg1004864.p1	3.465	+	TSC_hg19_v1_chr3_+_50654932 AK313565 U43784 AB528893 EU832627 EU832702 CU675717 AB451303 AB451434	-35079	+	BC001662 BC010407 TSC_hg19_v1_chr3_+_50654611 BC007591 U09578	-35384	+	TSC_hg19_v1_chr3_+_50654595 AK290969	-35419	+	AY254099 NM_004947 AY145303	22671	+	NM_006010 TSC_hg19_v1_chr3_+_51422691	732680	+	TSC_hg19_v1_chr3_+_51422721 BC113588 BC113590 AK292243 BC007282 BT007110 EU832655 EU832733 BC033055	732770	+	AK313565|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U43784|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832627|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##EU832702|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451303|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AB451434|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC001662|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC010407|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##BC007591|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##U09578|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AK290969|MAPKAPK3|7867|mitogen-activated protein kinase-activated protein kinase 3##AY254099|DOCK3|1795|dedicator of cytokinesis 3##NM_004947|DOCK3|1795|dedicator of cytokinesis 3##AY145303|DOCK3|1795|dedicator of cytokinesis 3##NM_006010|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113588|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC113590|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##AK292243|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC007282|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BT007110|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832655|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##EU832733|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor##BC033055|MANF|7873|mesencephalic astrocyte-derived neurotrophic factor	0.0	
chr5	33848796	33848941	reg1035564.p1	3.465	+	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	-407729	+	AK292346 TSC_hg19_v1_chr5_+_33440874 NM_152295	-408012	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	-1137063	+	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	43177	-	TSC_hg19_v1_chr5_-_33892294 AJ250725	43427	-	D88437 NM_016568	87622	+	AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##AK292346|TARS|6897|threonyl-tRNA synthetase##NM_152295|TARS|6897|threonyl-tRNA synthetase##BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##D88437|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##NM_016568|RXFP3|51289|relaxin/insulin-like family peptide receptor 3	0.0	
chr8	1721195	1721354	reg1038934.p1	3.465	+	TSC_hg19_v1_chr8_+_1712012 BC007725	-9238	+	NM_018941 TSC_hg19_v1_chr8_+_1711937 AK312486 AF123757 AF123758 AF123759 AF123760 AF123761	-9364	+	AF119818 AF119817 NM_004745	-271725	+	TSC_hg19_v1_chr8_+_1772112 AB002292 NM_014629 BC112926 CR749570	50865	+	TSC_hg19_v1_chr8_+_1922078 AB018254 NM_014867	200784	+	TSC_hg19_v1_chr8_+_1949299 AY762229	227976	+	BC007725|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##NM_018941|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AK312486|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123757|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123758|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123759|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123760|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF123761|CLN8|2055|ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)##AF119818|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##AF119817|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##NM_004745|DLGAP2|9228|discs, large (Drosophila) homolog-associated protein 2##AB002292|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##NM_014629|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##BC112926|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##CR749570|ARHGEF10|9639|Rho guanine nucleotide exchange factor (GEF) 10##AB018254|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##NM_014867|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11##AY762229|KBTBD11|9920|kelch repeat and BTB (POZ) domain containing 11	0.0	
chr1	174128193	174128374	reg1032912.p1	3.464	+	TSC_hg19_v1_chr1_-_173991524 AB007961	-136768	-	AB095945 BC136784 BC144408 AK122948 NM_172071	-166154	-	AK093501 AX748170 TSC_hg19_v1_chr1_-_173933260	-195065	-	BC041888 NM_014857 TSC_hg19_v1_chr1_+_174128608	317	+	AK095838 TSC_hg19_v1_chr1_+_174128676 AL157958	409	+	BC095532 NM_005684 CU688296 CU688298 BC067456 BC067457 BC067458 BC067459 BC067460 BC069460 HQ995526	288947	+	AB095945|RC3H1|149041|ring finger and CCCH-type domains 1##BC136784|RC3H1|149041|ring finger and CCCH-type domains 1##BC144408|RC3H1|149041|ring finger and CCCH-type domains 1##AK122948|RC3H1|149041|ring finger and CCCH-type domains 1##NM_172071|RC3H1|149041|ring finger and CCCH-type domains 1##AK093501|RC3H1|149041|ring finger and CCCH-type domains 1##BC041888|RABGAP1L|9910|RAB GTPase activating protein 1-like##NM_014857|RABGAP1L|9910|RAB GTPase activating protein 1-like##AK095838|RABGAP1L|9910|RAB GTPase activating protein 1-like##AL157958|RABGAP1L|9910|RAB GTPase activating protein 1-like##BC095532|GPR52|9293|G protein-coupled receptor 52##NM_005684|GPR52|9293|G protein-coupled receptor 52##BC067456|GPR52|9293|G protein-coupled receptor 52##BC067457|GPR52|9293|G protein-coupled receptor 52##BC067458|GPR52|9293|G protein-coupled receptor 52##BC067459|GPR52|9293|G protein-coupled receptor 52##BC067460|GPR52|9293|G protein-coupled receptor 52##BC069460|GPR52|9293|G protein-coupled receptor 52##HQ995526|GPR52|9293|G protein-coupled receptor 52	0.017939	
chr13	48975196	48975314	reg1039027.p2	3.464	+	TSC_hg19_v1_chr13_+_48878045 M33647 AB384726 CU691646 DQ891564 DQ894752	-97209	+	TSC_hg19_v1_chr13_+_48877982 AB208788	-97289	+	TSC_hg19_v1_chr13_+_48877902 L41870 M15400 M19701 M28419	-97334	+	AK223389 BC070295 BC054346 TSC_hg19_v1_chr13_-_48987235 BC040850	11875	-	BX537445 AK123059 BX537392 BX537438 BX647109 TSC_hg19_v1_chr13_-_48987250	12000	-	NM_001162498	12397	-	M33647|RB1|5925|retinoblastoma 1##DQ891564|RB1|5925|retinoblastoma 1##DQ894752|RB1|5925|retinoblastoma 1##AB208788|RB1|5925|retinoblastoma 1##L41870|RB1|5925|retinoblastoma 1##M15400|RB1|5925|retinoblastoma 1##M19701|RB1|5925|retinoblastoma 1##M28419|RB1|5925|retinoblastoma 1##AK223389|LPAR6|10161|lysophosphatidic acid receptor 6##BC070295|LPAR6|10161|lysophosphatidic acid receptor 6##BC054346|LPAR6|10161|lysophosphatidic acid receptor 6##BC040850|LPAR6|10161|lysophosphatidic acid receptor 6##BX537445|LPAR6|10161|lysophosphatidic acid receptor 6##AK123059|LPAR6|10161|lysophosphatidic acid receptor 6##BX537392|LPAR6|10161|lysophosphatidic acid receptor 6##BX537438|LPAR6|10161|lysophosphatidic acid receptor 6##BX647109|LPAR6|10161|lysophosphatidic acid receptor 6##NM_001162498|LPAR6|10161|lysophosphatidic acid receptor 6	0.0	
chr13	98112424	98112540	reg1033766.p1	3.464	+	TSC_hg19_v1_chr13_+_98086683 AF205602 BC070031 EU832309 EU832393 X12534 AB464128 AF493914	-25780	+	TSC_hg19_v1_chr13_+_98086350 AK315139 NM_021033 BC041333	-26045	+	TSC_hg19_v1_chr13_+_97999294 AF339832	-113188	+	NM_002271 BC045640	493455	+	TSC_hg19_v1_chr13_+_98628928 BX648222 AK303494 AK225286 BC001497 BC019309 DQ893033 EU176755 U72761	516350	+	TSC_hg19_v1_chr13_+_98795412 NM_001001715 NM_005766	682939	+	AF205602|RAP2A|5911|RAP2A, member of RAS oncogene family##BC070031|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832309|RAP2A|5911|RAP2A, member of RAS oncogene family##EU832393|RAP2A|5911|RAP2A, member of RAS oncogene family##X12534|RAP2A|5911|RAP2A, member of RAS oncogene family##AF493914|RAP2A|5911|RAP2A, member of RAS oncogene family##AK315139|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_021033|RAP2A|5911|RAP2A, member of RAS oncogene family##BC041333|RAP2A|5911|RAP2A, member of RAS oncogene family##NM_002271|IPO5|3843|importin 5##BC045640|IPO5|3843|importin 5##BX648222|IPO5|3843|importin 5##AK303494|IPO5|3843|importin 5##AK225286|IPO5|3843|importin 5##BC001497|IPO5|3843|importin 5##BC019309|IPO5|3843|importin 5##DQ893033|IPO5|3843|importin 5##EU176755|IPO5|3843|importin 5##U72761|IPO5|3843|importin 5##NM_001001715|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)##NM_005766|FARP1|10160|FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)	0.0	
chr1	88526053	88526176	reg1035257.p2	3.464	+	TSC_hg19_v1_chr1_+_87797426 BC065818	-728699	+	TSC_hg19_v1_chr1_+_87797312 AY321514	-728789	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	-731433	+	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	623981	+	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	831097	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	831159	-	BC065818|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB	0.0	
chr19	12476401	12476549	reg1018859.p1	3.464	+	AK024418 AK295923 NM_030824	-15	-	AK313755 BC022523 AK092116 AX747362 NM_145276	-31991	-	TSC_hg19_v1_chr19_-_12405615 BC136502 AK297528 BC032246 AB021642 BC001868 NM_001164276 NM_016264	-70823	-	TSC_hg19_v1_chr19_-_12512035 BC057831 NM_001080821	35579	-	AK299532 TSC_hg19_v1_chr19_-_12551771	75291	-	AK023025 BC032753 TSC_hg19_v1_chr19_-_12551836 AB011414 NM_005815	75391	-	AK024418|ZNF442|79973|zinc finger protein 442##AK295923|ZNF442|79973|zinc finger protein 442##NM_030824|ZNF442|79973|zinc finger protein 442##AK313755|ZNF563|147837|zinc finger protein 563##BC022523|ZNF563|147837|zinc finger protein 563##AK092116|ZNF563|147837|zinc finger protein 563##NM_145276|ZNF563|147837|zinc finger protein 563##BC136502|ZNF44|51710|zinc finger protein 44##AK297528|ZNF44|51710|zinc finger protein 44##BC032246|ZNF44|51710|zinc finger protein 44##AB021642|ZNF44|51710|zinc finger protein 44##BC001868|ZNF44|51710|zinc finger protein 44##NM_001164276|ZNF44|51710|zinc finger protein 44##NM_016264|ZNF44|51710|zinc finger protein 44##NM_001080821|ZNF799|90576|zinc finger protein 799##AK299532|ZNF443|10224|zinc finger protein 443##AK023025|ZNF443|10224|zinc finger protein 443##BC032753|ZNF443|10224|zinc finger protein 443##AB011414|ZNF443|10224|zinc finger protein 443##NM_005815|ZNF443|10224|zinc finger protein 443	0.0	
chr22	25959765	25959831	reg1041219.p1	3.464	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	-115722	+	BC139736 NM_001135772	-182255	-	AL137651 NM_182492	-201275	-	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	1001	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	1148	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	178322	+	BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC139736|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_001135772|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##AL137651|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##NM_182492|LRP5L|91355|low density lipoprotein receptor-related protein 5-like##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB	0.0	
chr22	25961093	25961172	reg1029376.p1	3.464	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-186	+	TSC_hg19_v1_chr22_+_25960802 BC036797 NM_005160	-333	+	TSC_hg19_v1_chr22_+_25844071 BC047380 BC037884	-117056	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	176988	+	TSC_hg19_v1_chr22_+_26138168 AY077700	177052	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	604305	+	BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC036797|ADRBK2|157|adrenergic, beta, receptor kinase 2##NM_005160|ADRBK2|157|adrenergic, beta, receptor kinase 2##BC047380|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##BC037884|CRYBB2P1|1416|crystallin, beta B2 pseudogene 1##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##AY077700|MYO18B|84700|myosin XVIIIB##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.0	
chr2	98067987	98068080	reg1039864.p1	3.464	+	AY358571 NM_001164315 BX647769 TSC_hg19_v1_chr2_+_97779310 AK304740 AK316541 AK307629 BC046186 BC128262 BC128517 CU692324	-288680	+	TSC_hg19_v1_chr2_-_97760578 AK295056 BC064511 NM_199336	-307442	-	NM_001122646	-415733	-	CU687166 TSC_hg19_v1_chr2_-_98206176	138129	-	BC071771 BC017427 TSC_hg19_v1_chr2_-_98206339 AK074570 NM_025190	138307	-	TSC_hg19_v1_chr2_+_98262533 BC006229 NM_001862 AB463554 M19961 BT006742 CR541727 CR541753 DQ890572 EU176480	194504	+	AY358571|ANKRD36|375248|ankyrin repeat domain 36##NM_001164315|ANKRD36|375248|ankyrin repeat domain 36##BX647769|ANKRD36|375248|ankyrin repeat domain 36##AK304740|ANKRD36|375248|ankyrin repeat domain 36##AK316541|ANKRD36|375248|ankyrin repeat domain 36##AK307629|ANKRD36|375248|ankyrin repeat domain 36##BC046186|ANKRD36|375248|ankyrin repeat domain 36##BC128262|ANKRD36|375248|ankyrin repeat domain 36##BC128517|ANKRD36|375248|ankyrin repeat domain 36##AK295056|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##BC064511|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##NM_199336|FAHD2B|151313|fumarylacetoacetate hydrolase domain containing 2B##NM_001122646|FAM178B|51252|family with sequence similarity 178, member B##BC071771|ANKRD36B|57730|ankyrin repeat domain 36B##BC017427|ANKRD36B|57730|ankyrin repeat domain 36B##AK074570|ANKRD36B|57730|ankyrin repeat domain 36B##NM_025190|ANKRD36B|57730|ankyrin repeat domain 36B##BC006229|COX5B|1329|cytochrome c oxidase subunit Vb##NM_001862|COX5B|1329|cytochrome c oxidase subunit Vb##M19961|COX5B|1329|cytochrome c oxidase subunit Vb##BT006742|COX5B|1329|cytochrome c oxidase subunit Vb##CR541727|COX5B|1329|cytochrome c oxidase subunit Vb##CR541753|COX5B|1329|cytochrome c oxidase subunit Vb##DQ890572|COX5B|1329|cytochrome c oxidase subunit Vb##EU176480|COX5B|1329|cytochrome c oxidase subunit Vb	0.795955	CTCF.p2:0:0.796
chr5	172709053	172709163	reg1031869.p2	3.464	+	AB021133 CU693024 AB464641 DQ893313 DQ894104 DQ896627 BC025711 AK290615 AK307249 AK297844 AK307218 AK309495 U34962 AK307247 NM_001166175 NM_001166176 NM_004387	-46909	-	NM_001205 NM_013978 NM_013979 NM_013980 BC010959 TSC_hg19_v1_chr5_+_172571536 AF083957 AF083958 U15172 AB527856 CU679862 AF083956 AY216799	-137612	+	TSC_hg19_v1_chr5_+_172484383 AK297424	-224725	+	AF031036 BT019591 CR541825 CU674324 EU832632 EU832707 BC006352 BC013958 TSC_hg19_v1_chr5_-_172755285 AF055460 AB012664 AF098462	46154	-	AK075406 TSC_hg19_v1_chr5_-_172755420 BC000658 AK027390 AK027663	46335	-	AK095891 NM_003714	47397	-	AB021133|NKX2-5|1482|NK2 homeobox 5##DQ893313|NKX2-5|1482|NK2 homeobox 5##DQ894104|NKX2-5|1482|NK2 homeobox 5##DQ896627|NKX2-5|1482|NK2 homeobox 5##BC025711|NKX2-5|1482|NK2 homeobox 5##AK290615|NKX2-5|1482|NK2 homeobox 5##AK307249|NKX2-5|1482|NK2 homeobox 5##AK297844|NKX2-5|1482|NK2 homeobox 5##AK307218|NKX2-5|1482|NK2 homeobox 5##AK309495|NKX2-5|1482|NK2 homeobox 5##U34962|NKX2-5|1482|NK2 homeobox 5##AK307247|NKX2-5|1482|NK2 homeobox 5##NM_001166175|NKX2-5|1482|NK2 homeobox 5##NM_001166176|NKX2-5|1482|NK2 homeobox 5##NM_004387|NKX2-5|1482|NK2 homeobox 5##NM_001205|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013978|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013979|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##NM_013980|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##BC010959|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083957|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083958|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##U15172|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AF083956|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AY216799|BNIP1|662|BCL2/adenovirus E1B 19kDa interacting protein 1##AK297424|C5orf41|153222|chromosome 5 open reading frame 41##AF031036|STC2|8614|stanniocalcin 2##BT019591|STC2|8614|stanniocalcin 2##CR541825|STC2|8614|stanniocalcin 2##EU832632|STC2|8614|stanniocalcin 2##EU832707|STC2|8614|stanniocalcin 2##BC006352|STC2|8614|stanniocalcin 2##BC013958|STC2|8614|stanniocalcin 2##AF055460|STC2|8614|stanniocalcin 2##AB012664|STC2|8614|stanniocalcin 2##AF098462|STC2|8614|stanniocalcin 2##AK075406|STC2|8614|stanniocalcin 2##BC000658|STC2|8614|stanniocalcin 2##AK027390|STC2|8614|stanniocalcin 2##AK027663|STC2|8614|stanniocalcin 2##AK095891|STC2|8614|stanniocalcin 2##NM_003714|STC2|8614|stanniocalcin 2	0.0	
chr7	58021846	58021933	reg1038743.p2	3.464	+	AK131575 NM_001159279	-512007	+	AF277624 NM_033273	-814319	-	Y10275 TSC_hg19_v1_chr7_-_56184079 BC043523 NM_001145712	-1837846	-	NM_001159522	5483931	+	NM_001159524	5645691	+	BC033523 NM_153363	5666962	+	AK131575|ZNF716|441234|zinc finger protein 716##NM_001159279|ZNF716|441234|zinc finger protein 716##AF277624|ZNF479|90827|zinc finger protein 479##NM_033273|ZNF479|90827|zinc finger protein 479##BC043523|LOC389493|389493|uncharacterized protein LOC389493##NM_001145712|LOC389493|389493|uncharacterized protein LOC389493##NM_001159522|ZNF727|442319|zinc finger protein 727##NM_001159524|ZNF735|730291|zinc finger protein 735##BC033523|ZNF679|168417|zinc finger protein 679##NM_153363|ZNF679|168417|zinc finger protein 679	0.0	
chr8	29208509	29208621	reg1025624.p2	3.464	+	CU678102 AB463587 EU831463 EU831550 S80632 U48807 BC002671 U21108 TSC_hg19_v1_chr8_-_29208200 BC014565 AK314820 NM_001394	-495	-	AL137704 NM_057158	-2244	-	BC005977 TSC_hg19_v1_chr8_-_29120611 BC028056 AB014539 AF279865 AK307848 AX721221 AK129580 NM_015254 BC051859	-87951	-	AF490252 DQ892451 DQ895663 AY454545 AF100748 AK222632 AK315956 TSC_hg19_v1_chr8_-_29940485	731909	-	TSC_hg19_v1_chr8_-_29940580 Z70223 BC015012 AF078855 AB028926 AK295360 AK075340 AK314659 AK025927 AY359104 NM_016127 AK094386	732007	-	NM_001128208 NM_015344 TSC_hg19_v1_chr8_+_29952935 BC000642 AF063605 AY277595 AY358674	744378	+	EU831463|DUSP4|1846|dual specificity phosphatase 4##EU831550|DUSP4|1846|dual specificity phosphatase 4##S80632|DUSP4|1846|dual specificity phosphatase 4##U48807|DUSP4|1846|dual specificity phosphatase 4##BC002671|DUSP4|1846|dual specificity phosphatase 4##U21108|DUSP4|1846|dual specificity phosphatase 4##BC014565|DUSP4|1846|dual specificity phosphatase 4##AK314820|DUSP4|1846|dual specificity phosphatase 4##NM_001394|DUSP4|1846|dual specificity phosphatase 4##AL137704|DUSP4|1846|dual specificity phosphatase 4##NM_057158|DUSP4|1846|dual specificity phosphatase 4##BC005977|KIF13B|23303|kinesin family member 13B##BC028056|KIF13B|23303|kinesin family member 13B##AB014539|KIF13B|23303|kinesin family member 13B##AF279865|KIF13B|23303|kinesin family member 13B##AK307848|KIF13B|23303|kinesin family member 13B##AK129580|KIF13B|23303|kinesin family member 13B##NM_015254|KIF13B|23303|kinesin family member 13B##BC051859|KIF13B|23303|kinesin family member 13B##AF490252|TMEM66|51669|transmembrane protein 66##DQ892451|TMEM66|51669|transmembrane protein 66##DQ895663|TMEM66|51669|transmembrane protein 66##AF100748|TMEM66|51669|transmembrane protein 66##AK222632|TMEM66|51669|transmembrane protein 66##AK315956|TMEM66|51669|transmembrane protein 66##Z70223|TMEM66|51669|transmembrane protein 66##BC015012|TMEM66|51669|transmembrane protein 66##AF078855|TMEM66|51669|transmembrane protein 66##AB028926|TMEM66|51669|transmembrane protein 66##AK295360|TMEM66|51669|transmembrane protein 66##AK075340|TMEM66|51669|transmembrane protein 66##AK314659|TMEM66|51669|transmembrane protein 66##AK025927|TMEM66|51669|transmembrane protein 66##AY359104|TMEM66|51669|transmembrane protein 66##NM_016127|TMEM66|51669|transmembrane protein 66##AK094386|TMEM66|51669|transmembrane protein 66##NM_001128208|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_015344|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##BC000642|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF063605|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY277595|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AY358674|LEPROTL1|23484|leptin receptor overlapping transcript-like 1	0.09557	
chrX	153570196	153570329	reg1046447.p1	3.464	+	NM_001145934	-36854	+	NM_001145933 NM_012253 AK301724 TSC_hg19_v1_chrX_+_153524147 AK292261 AK302044 BC025382 AK302261 AK292224 AB527362 AM392578 AM393533 CU692986	-46143	+	DQ655913 TSC_hg19_v1_chrX_-_153523933	-46397	-	TSC_hg19_v1_chrX_-_153599586 AB191259 AB371575 AB371577 AB371578 AB371579 AB191260 AB371574 AB371576 AB463042 AK090427	29353	-	TSC_hg19_v1_chrX_-_153599726 AB593010	29460	-	X53416 TSC_hg19_v1_chrX_-_153602972	32688	-	NM_001145934|TKTL1|8277|transketolase-like 1##NM_001145933|TKTL1|8277|transketolase-like 1##NM_012253|TKTL1|8277|transketolase-like 1##AK301724|TKTL1|8277|transketolase-like 1##AK292261|TKTL1|8277|transketolase-like 1##AK302044|TKTL1|8277|transketolase-like 1##BC025382|TKTL1|8277|transketolase-like 1##AK302261|TKTL1|8277|transketolase-like 1##AK292224|TKTL1|8277|transketolase-like 1##AM392578|TKTL1|8277|transketolase-like 1##AM393533|TKTL1|8277|transketolase-like 1##DQ655913|TEX28|1527|testis expressed 28##AB191259|FLNA|2316|filamin A, alpha##AB371575|FLNA|2316|filamin A, alpha##AB371577|FLNA|2316|filamin A, alpha##AB371578|FLNA|2316|filamin A, alpha##AB371579|FLNA|2316|filamin A, alpha##AB191260|FLNA|2316|filamin A, alpha##AB371574|FLNA|2316|filamin A, alpha##AB371576|FLNA|2316|filamin A, alpha##AK090427|FLNA|2316|filamin A, alpha##AB593010|FLNA|2316|filamin A, alpha##X53416|FLNA|2316|filamin A, alpha	0.024611	
chr11	126261967	126262106	reg1041557.p1	3.463	+	NM_006278 X74570	-35941	+	TSC_hg19_v1_chr11_-_126225452 AK096370	-36573	-	TSC_hg19_v1_chr11_+_126173954 AK307403 BC014532 AF077201 CU677035 AY077684	-88067	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	13962	+	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	608624	-	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	608689	-	NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK096370|FLJ39051|399972|uncharacterized LOC399972##AK307403|DCPS|28960|decapping enzyme, scavenger##BC014532|DCPS|28960|decapping enzyme, scavenger##AF077201|DCPS|28960|decapping enzyme, scavenger##AY077684|DCPS|28960|decapping enzyme, scavenger##AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)	0.65826	CTCF.p2:13:0.658
chr1	162674423	162674505	reg1044591.p1	3.463	+	AK225063 TSC_hg19_v1_chr1_+_162602308	-72153	+	TSC_hg19_v1_chr1_+_162602235 NM_001014796 NM_006182 AK095975 AK225196 X74764 BX640899 BC052998 AK314388	-72218	+	TSC_hg19_v1_chr1_+_162531349 AK312685 S73498	-143091	+	AK022929 AF145023 NM_016371 BC065246 AK290741 BC007068 AJ249179 AF098786 AY358962 BT007075 CU675533 CU688024 GQ129366 GQ129367	86076	+	BC040018 AK123573 NM_178550	164113	-	NM_001102445	363931	+	AK225063|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_001014796|DDR2|4921|discoidin domain receptor tyrosine kinase 2##NM_006182|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK095975|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK225196|DDR2|4921|discoidin domain receptor tyrosine kinase 2##X74764|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BX640899|DDR2|4921|discoidin domain receptor tyrosine kinase 2##BC052998|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK314388|DDR2|4921|discoidin domain receptor tyrosine kinase 2##AK312685|UAP1|6675|UDP-N-acteylglucosamine pyrophosphorylase 1##S73498|UAP1|6675|UDP-N-acteylglucosamine pyrophosphorylase 1##AK022929|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF145023|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##NM_016371|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC065246|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AK290741|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC007068|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AJ249179|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AF098786|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##AY358962|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BT007075|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129366|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##GQ129367|HSD17B7|51478|hydroxysteroid (17-beta) dehydrogenase 7##BC040018|C1orf110|339512|chromosome 1 open reading frame 110##AK123573|C1orf110|339512|chromosome 1 open reading frame 110##NM_178550|C1orf110|339512|chromosome 1 open reading frame 110##NM_001102445|RGS4|5999|regulator of G-protein signaling 4	0.0	
chr12	115792644	115792788	reg1031890.p2	3.463	+	TSC_hg19_v1_chr12_-_115121970 AK054604 NM_005996 NM_016569	-670576	-	AB051068 AF221714 NM_000192 NM_080717 Y09445	-946498	-	BC027942 NM_181486 TSC_hg19_v1_chr12_-_114843950	-948792	-	TSC_hg19_v1_chr12_-_116714956 BC130422 AF515599 NM_015335	922234	-	TSC_hg19_v1_chr12_-_116715263 AY338463	922444	-	TSC_hg19_v1_chr12_+_116971258 AK124947 BC038547	1178513	+	AK054604|TBX3|6926|T-box 3##NM_005996|TBX3|6926|T-box 3##NM_016569|TBX3|6926|T-box 3##AB051068|TBX5|6910|T-box 5##AF221714|TBX5|6910|T-box 5##NM_000192|TBX5|6910|T-box 5##NM_080717|TBX5|6910|T-box 5##Y09445|TBX5|6910|T-box 5##BC027942|TBX5|6910|T-box 5##NM_181486|TBX5|6910|T-box 5##BC130422|MED13L|23389|mediator complex subunit 13-like##AF515599|MED13L|23389|mediator complex subunit 13-like##NM_015335|MED13L|23389|mediator complex subunit 13-like##AY338463|MED13L|23389|mediator complex subunit 13-like##AK124947|LINC00173|100287569|long intergenic non-protein coding RNA 173##BC038547|LINC00173|100287569|long intergenic non-protein coding RNA 173	0.0	
chr12	56709779	56709846	reg1019163.p1	3.463	+	TSC_hg19_v1_chr12_-_56709793 BC001027 AK312921	-12	-	TSC_hg19_v1_chr12_-_56709750 AF186113 AB015631 BC065015	-98	-	NM_004077 TSC_hg19_v1_chr12_-_56694176	-15637	-	TSC_hg19_v1_chr12_-_56709831 AY032624 AY359102 NM_001190991 NM_014255	167	-	BX648106 BC094885 NM_001127460	17677	-	AK310822 AB014610 BC024043 NM_001166279 NM_014871	17966	-	BC001027|CNPY2|10330|canopy 2 homolog (zebrafish)##AK312921|CNPY2|10330|canopy 2 homolog (zebrafish)##AF186113|CNPY2|10330|canopy 2 homolog (zebrafish)##AB015631|CNPY2|10330|canopy 2 homolog (zebrafish)##BC065015|CNPY2|10330|canopy 2 homolog (zebrafish)##NM_004077|CS|1431|citrate synthase##AY032624|CNPY2|10330|canopy 2 homolog (zebrafish)##AY359102|CNPY2|10330|canopy 2 homolog (zebrafish)##NM_001190991|CNPY2|10330|canopy 2 homolog (zebrafish)##NM_014255|CNPY2|10330|canopy 2 homolog (zebrafish)##BX648106|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC094885|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_001127460|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##AK310822|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##AB014610|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##BC024043|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_001166279|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_014871|PAN2|9924|PAN2 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)	0.0	
chr16	63495279	63495358	reg1030915.p1	3.463	+	AK124734 NM_001796	-1424580	-	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-4727121	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-4776662	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	1660584	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	1660650	-	TSC_hg19_v1_chr16_-_65155987 AK297377	1660676	-	AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK297377|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.9402	CTCF.p2:2:0.940
chr19	57813358	57813424	reg1033026.p1	3.463	+	TSC_hg19_v1_chr19_+_57791852 AK292144 NM_006635 AK074582 AY329492	-21504	+	TSC_hg19_v1_chr19_+_57791351 AK298106	-22035	+	TSC_hg19_v1_chr19_+_57752051 NM_001023563 NM_001145078	-61334	+	TSC_hg19_v1_chr19_+_57831849 NM_213598 AK131547	18523	+	TSC_hg19_v1_chr19_+_57862669 NM_020657 AJ276316 BC111531 BC111532	49272	+	AF058918 AF291676 AK055662 NM_173631 BC008889 BC032809 BC042681 AL832545 BC064426 AK291464	61525	+	AK292144|ZNF460|10794|zinc finger protein 460##NM_006635|ZNF460|10794|zinc finger protein 460##AK074582|ZNF460|10794|zinc finger protein 460##AY329492|ZNF460|10794|zinc finger protein 460##AK298106|ZNF460|10794|zinc finger protein 460##NM_001023563|ZNF805|390980|zinc finger protein 805##NM_001145078|ZNF805|390980|zinc finger protein 805##NM_213598|ZNF543|125919|zinc finger protein 543##AK131547|ZNF543|125919|zinc finger protein 543##NM_020657|ZNF304|57343|zinc finger protein 304##AJ276316|ZNF304|57343|zinc finger protein 304##BC111531|ZNF304|57343|zinc finger protein 304##BC111532|ZNF304|57343|zinc finger protein 304##AF058918|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##AF291676|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##AK055662|ZNF547|284306|zinc finger protein 547##NM_173631|ZNF547|284306|zinc finger protein 547##BC008889|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##BC032809|TRAPPC2P1|10597|trafficking protein particle complex 2 pseudogene 1##BC042681|ZNF547|284306|zinc finger protein 547##AL832545|ZNF547|284306|zinc finger protein 547##AK291464|ZNF547|284306|zinc finger protein 547	0.0	
chr3	144304349	144304472	reg1040416.p1	3.463	+	NM_001134470 AK294020	-612193	+	TSC_hg19_v1_chr3_+_143690915 BC037293	-613420	+	NM_173552 AK315082	-613758	+	AB527423 U84573 AK295084 TSC_hg19_v1_chr3_-_145878818	1574397	-	TSC_hg19_v1_chr3_-_145878972 BC037169 AB209879	1574546	-	TSC_hg19_v1_chr3_-_145879223 NM_000935 NM_182943	1574841	-	NM_001134470|C3orf58|205428|chromosome 3 open reading frame 58##AK294020|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##U84573|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AK295084|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##BC037169|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##AB209879|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_000935|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2##NM_182943|PLOD2|5352|procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2	0.0	
chr3	194928971	194929054	reg1041243.p1	3.463	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-521509	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-522389	+	NM_018385	-535807	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	62838	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	234690	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	341101	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.0	
chr5	156558061	156558168	reg1038596.p2	3.463	+	TSC_hg19_v1_chr5_-_156536188 NM_032782	-21898	-	AK027334 TSC_hg19_v1_chr5_-_156536052 AF450242 AF450243 AK314406 BC020843 AF251707 BC063431	-22011	-	AY069944 CU687712 TSC_hg19_v1_chr5_-_156536016	-22103	-	NM_001100816 TSC_hg19_v1_chr5_-_156569881 AK123613 AF031383 BC005250 BC006968 AK308393 NM_004270	11738	-	AY973323 CU692472 AF465821 BC025397 AK057543 BC022035 BC025409 BC025998 NM_130899	35114	-	BC094701 AB209622 D13720 NM_005546 BC109077 BC109078 AK312846 AK303609 AB590549	49803	+	NM_032782|HAVCR2|84868|hepatitis A virus cellular receptor 2##AK027334|HAVCR2|84868|hepatitis A virus cellular receptor 2##AF450242|HAVCR2|84868|hepatitis A virus cellular receptor 2##AF450243|HAVCR2|84868|hepatitis A virus cellular receptor 2##AK314406|HAVCR2|84868|hepatitis A virus cellular receptor 2##BC020843|HAVCR2|84868|hepatitis A virus cellular receptor 2##AF251707|HAVCR2|84868|hepatitis A virus cellular receptor 2##BC063431|HAVCR2|84868|hepatitis A virus cellular receptor 2##AY069944|HAVCR2|84868|hepatitis A virus cellular receptor 2##NM_001100816|MED7|9443|mediator complex subunit 7##AF031383|MED7|9443|mediator complex subunit 7##BC005250|MED7|9443|mediator complex subunit 7##BC006968|MED7|9443|mediator complex subunit 7##AK308393|MED7|9443|mediator complex subunit 7##NM_004270|MED7|9443|mediator complex subunit 7##AY973323|FAM71B|153745|family with sequence similarity 71, member B##AF465821|FAM71B|153745|family with sequence similarity 71, member B##BC025397|FAM71B|153745|family with sequence similarity 71, member B##AK057543|FAM71B|153745|family with sequence similarity 71, member B##BC022035|FAM71B|153745|family with sequence similarity 71, member B##BC025409|FAM71B|153745|family with sequence similarity 71, member B##BC025998|FAM71B|153745|family with sequence similarity 71, member B##NM_130899|FAM71B|153745|family with sequence similarity 71, member B##AB209622|ITK|3702|IL2-inducible T-cell kinase##D13720|ITK|3702|IL2-inducible T-cell kinase##NM_005546|ITK|3702|IL2-inducible T-cell kinase##BC109077|ITK|3702|IL2-inducible T-cell kinase##BC109078|ITK|3702|IL2-inducible T-cell kinase##AK312846|ITK|3702|IL2-inducible T-cell kinase##AK303609|ITK|3702|IL2-inducible T-cell kinase	0.0	
chr5	88731376	88731480	reg1030972.p2	3.463	+	AL833268 AL833274 NM_001131005 NM_001193347	-531534	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-546164	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-546308	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	974111	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1038754	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1039150	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr7	3132242	3132350	reg1037517.p1	3.463	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	-48834	-	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-248488	-	AK289723 AB075830 BC146753 NM_133463	-413138	+	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	208703	+	TSC_hg19_v1_chr7_+_4721925 NM_001037165	1589542	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	1589955	+	AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##NM_001037165|FOXK1|221937|forkhead box K1##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1	0.0	
chrX	131770254	131770370	reg1032023.p1	3.463	+	BC042090 NM_001170704 TSC_hg19_v1_chrX_-_131624064	-146279	-	AF491305 EU446986 BC074775 BC074776 AB077698 AB077699 AF467070 AJ427918 AJ427919 AY072692 NM_018388 NM_133486	-196635	-	AY372211 AK002178 NM_001170701 NM_001170702 AK300248 NM_001170703	-222727	-	TSC_hg19_v1_chrX_-_132091486 BC037325 AK295118 AL049679 AB067777 AB067776 AK295041	321089	-	AK075402 TSC_hg19_v1_chrX_-_132092281 BC094718	321944	-	AK056706 NM_001077188 NM_147175	325110	-	BC042090|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170704|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF491305|MBNL3|55796|muscleblind-like 3 (Drosophila)##EU446986|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074775|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC074776|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077698|MBNL3|55796|muscleblind-like 3 (Drosophila)##AB077699|MBNL3|55796|muscleblind-like 3 (Drosophila)##AF467070|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427918|MBNL3|55796|muscleblind-like 3 (Drosophila)##AJ427919|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY072692|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_018388|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_133486|MBNL3|55796|muscleblind-like 3 (Drosophila)##AY372211|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK002178|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170701|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170702|MBNL3|55796|muscleblind-like 3 (Drosophila)##AK300248|MBNL3|55796|muscleblind-like 3 (Drosophila)##NM_001170703|MBNL3|55796|muscleblind-like 3 (Drosophila)##BC037325|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295118|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AL049679|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067777|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AB067776|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK295041|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK075402|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##BC094718|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##AK056706|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_001077188|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2##NM_147175|HS6ST2|90161|heparan sulfate 6-O-sulfotransferase 2	0.94366	CTCF.p2:-4:0.944
chr10	13732698	13732772	reg1037230.p2	3.462	+	TSC_hg19_v1_chr10_+_13628964 AK314814 BC002572 U51990 BC000794	-103748	+	NM_003675 TSC_hg19_v1_chr10_+_13628948	-103792	+	BC031618 AK097602 NM_001100912 NM_152751	-187776	-	TSC_hg19_v1_chr10_-_13749648 AK057828	16954	-	TSC_hg19_v1_chr10_-_14050453 AK001072	317757	-	AK289693 NM_018027 AB037715 BC151244 TSC_hg19_v1_chr10_-_14372894	640115	-	AK314814|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC002572|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##U51990|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC000794|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##NM_003675|PRPF18|8559|PRP18 pre-mRNA processing factor 18 homolog (S. cerevisiae)##BC031618|BEND7|222389|BEN domain containing 7##AK097602|BEND7|222389|BEN domain containing 7##NM_001100912|BEND7|222389|BEN domain containing 7##NM_152751|BEND7|222389|BEN domain containing 7##AK057828|FRMD4A|55691|FERM domain containing 4A##AK001072|FRMD4A|55691|FERM domain containing 4A##AK289693|FRMD4A|55691|FERM domain containing 4A##NM_018027|FRMD4A|55691|FERM domain containing 4A##AB037715|FRMD4A|55691|FERM domain containing 4A##BC151244|FRMD4A|55691|FERM domain containing 4A	0.0	
chr10	17685814	17685994	reg1029522.p1	3.462	+	BC027709 TSC_hg19_v1_chr10_-_17659374 AY455942 BC010353 NM_014241	-26531	-	TSC_hg19_v1_chr10_-_17496346 BC137102 BC137103 BC144472	-189539	-	TSC_hg19_v1_chr10_-_17496178 AB062101 AJ621583 NM_001004470	-189690	-	NM_003473 TSC_hg19_v1_chr10_+_17686153 BC030586 AK314405 AK303083 U43899 AB590764 CU688920	326	+	NM_001098844 BC157856	108350	+	AK308132 AK308167 BC142642 J05550 NM_002438 X55635 BC146838 DQ663787	165499	+	BC027709|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##AY455942|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC010353|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##NM_014241|PTPLA|9200|protein tyrosine phosphatase-like (proline instead of catalytic arginine), member A##BC137102|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC137103|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##BC144472|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AB062101|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##AJ621583|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_001004470|ST8SIA6|338596|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6##NM_003473|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##BC030586|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK314405|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##AK303083|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##U43899|STAM|8027|signal transducing adaptor molecule (SH3 domain and ITAM motif) 1##NM_001098844|TMEM236|653567|transmembrane protein 236##BC157856|TMEM236|653567|transmembrane protein 236##BC142642|MRC1|4360|mannose receptor, C type 1##J05550|MRC1|4360|mannose receptor, C type 1##NM_002438|MRC1|4360|mannose receptor, C type 1##X55635|MRC1|4360|mannose receptor, C type 1##BC146838|MRC1|4360|mannose receptor, C type 1##DQ663787|MRC1|4360|mannose receptor, C type 1	0.0	
chr11	116015641	116015708	reg1036138.p2	3.462	+	TSC_hg19_v1_chr11_-_115375134 AB094146 CR457157 CU692354 AF132811 BC125102 BC125103 AY358334 AK075502 BC035930 AK315245 BC047021 NM_001098517 NM_014333	-640494	-	AY309502 TSC_hg19_v1_chr11_-_115088658	-927026	-	NM_182495 AK057953 BC111797 TSC_hg19_v1_chr11_+_114549272 AB463625	-1466426	+	TSC_hg19_v1_chr11_-_116643696 DQ892763 DQ896008 AK057832 AK225164 AK289635 AK291111 AK311068 BC006350 NM_001159736 NM_032725	628024	-	AK301227 BT006642 CU678646 TSC_hg19_v1_chr11_-_116658720 BC004256 BC011929 BC012162 BC017380 AF019767 BC111028	643041	-	BC017349 NM_003904 TSC_hg19_v1_chr11_-_116658738	643064	-	AB094146|CADM1|23705|cell adhesion molecule 1##CR457157|CADM1|23705|cell adhesion molecule 1##AF132811|CADM1|23705|cell adhesion molecule 1##BC125102|CADM1|23705|cell adhesion molecule 1##BC125103|CADM1|23705|cell adhesion molecule 1##AY358334|CADM1|23705|cell adhesion molecule 1##AK075502|CADM1|23705|cell adhesion molecule 1##BC035930|CADM1|23705|cell adhesion molecule 1##AK315245|CADM1|23705|cell adhesion molecule 1##BC047021|CADM1|23705|cell adhesion molecule 1##NM_001098517|CADM1|23705|cell adhesion molecule 1##NM_014333|CADM1|23705|cell adhesion molecule 1##AY309502|CADM1|23705|cell adhesion molecule 1##NM_182495|FAM55B|120406|family with sequence similarity 55, member B##AK057953|FAM55B|120406|family with sequence similarity 55, member B##BC111797|FAM55B|120406|family with sequence similarity 55, member B##DQ892763|BUD13|84811|BUD13 homolog (S. cerevisiae)##DQ896008|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK057832|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK225164|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK289635|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK291111|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK311068|BUD13|84811|BUD13 homolog (S. cerevisiae)##BC006350|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_001159736|BUD13|84811|BUD13 homolog (S. cerevisiae)##NM_032725|BUD13|84811|BUD13 homolog (S. cerevisiae)##AK301227|ZNF259|8882|zinc finger protein 259##BT006642|ZNF259|8882|zinc finger protein 259##BC004256|ZNF259|8882|zinc finger protein 259##BC011929|ZNF259|8882|zinc finger protein 259##BC012162|ZNF259|8882|zinc finger protein 259##BC017380|ZNF259|8882|zinc finger protein 259##AF019767|ZNF259|8882|zinc finger protein 259##BC111028|ZNF259|8882|zinc finger protein 259##BC017349|ZNF259|8882|zinc finger protein 259##NM_003904|ZNF259|8882|zinc finger protein 259	0.238037	CTCF.p2:-89:0.238
chr11	65728739	65728920	reg1029264.p1	3.462	+	AK057442 BC104021 BC104022 BC104023 NM_152762	-15715	+	TSC_hg19_v1_chr11_+_65686920 BC010025 AB463581 CU679579 EU446936 X96506	-41870	+	NM_006442 TSC_hg19_v1_chr11_+_65686745	-42090	+	NM_005146 TSC_hg19_v1_chr11_+_65729203 AK223016 AK293200 AK297589 AK309104 AK298184 BC001058 AB006198 AF353625 DQ891694 EU176645 BT006637 Y14314	440	+	TSC_hg19_v1_chr11_+_65769409 AF068235 NM_001143985 NM_003860	40650	+	AK094129 TSC_hg19_v1_chr11_-_65769629 BC005131 AK311891 NM_001242481 NM_001242482 NM_001242483 NM_001242484 NM_001242485 NM_001242486 NM_032325	40801	-	AK057442|TSGA10IP|254187|testis specific, 10 interacting protein##BC104021|TSGA10IP|254187|testis specific, 10 interacting protein##BC104022|TSGA10IP|254187|testis specific, 10 interacting protein##BC104023|TSGA10IP|254187|testis specific, 10 interacting protein##NM_152762|TSGA10IP|254187|testis specific, 10 interacting protein##BC010025|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##EU446936|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##X96506|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##NM_006442|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##NM_005146|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK223016|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK293200|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK297589|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AK298184|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BC001058|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AB006198|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AF353625|SART1|9092|squamous cell carcinoma antigen recognized by T cells##DQ891694|SART1|9092|squamous cell carcinoma antigen recognized by T cells##EU176645|SART1|9092|squamous cell carcinoma antigen recognized by T cells##BT006637|SART1|9092|squamous cell carcinoma antigen recognized by T cells##Y14314|SART1|9092|squamous cell carcinoma antigen recognized by T cells##AF068235|BANF1|8815|barrier to autointegration factor 1##NM_001143985|BANF1|8815|barrier to autointegration factor 1##NM_003860|BANF1|8815|barrier to autointegration factor 1##AK094129|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##BC005131|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##AK311891|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242481|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242482|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242483|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242484|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242485|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_001242486|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing##NM_032325|EIF1AD|84285|eukaryotic translation initiation factor 1A domain containing	0.0	
chr1	22236288	22236406	reg1035201.p2	3.462	+	AK127275 NM_001013693 BC146860	-97541	+	TSC_hg19_v1_chr1_-_22109701 AK026930 NM_001032730 NM_032236	-126648	-	TSC_hg19_v1_chr1_-_22109643 BC103724 BC067261	-126713	-	TSC_hg19_v1_chr1_-_22263804 X62515 NM_005529 M85289	27419	-	NM_007352 AK092382 AK308518 AX747509 BC005216 M18692 AK315798 AK308510 M16630	67132	+	BC005918 BC015103 D00306 NM_005747 BC007028 AK225620 AK308514 BC008383 CU675183 CU678941 DQ893182 DQ896490	91810	+	AK127275|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001013693|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##BC146860|LDLRAD2|401944|low density lipoprotein receptor class A domain containing 2##NM_001032730|USP48|84196|ubiquitin specific peptidase 48##NM_032236|USP48|84196|ubiquitin specific peptidase 48##BC103724|USP48|84196|ubiquitin specific peptidase 48##BC067261|USP48|84196|ubiquitin specific peptidase 48##X62515|HSPG2|3339|heparan sulfate proteoglycan 2##NM_005529|HSPG2|3339|heparan sulfate proteoglycan 2##M85289|HSPG2|3339|heparan sulfate proteoglycan 2##NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B##M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A##M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B##BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A##D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A	0.018732	
chr15	101467859	101468040	reg1044476.p2	3.462	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-8437	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-8475	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-47878	+	AB071402 TSC_hg19_v1_chr15_-_101791795	323787	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	324186	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	349714	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.0	
chr16	29089409	29089528	reg1030368.p1	3.462	+	TSC_hg19_v1_chr16_+_29086310 BC042920 AK225670 AK298442 AK301253	-3163	+	AK307342 NM_001014987 NM_001014988 NM_014387 TSC_hg19_v1_chr16_+_28996403 AJ223280	-93070	+	BC011563 NM_001014989	-93322	+	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	376383	+	BC022832 NM_001031827 NM_001039182	376816	-	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	381758	+	AK225670|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK298442|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK301253|RRN3P2|653390|RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 2##AK307342|LAT|27040|linker for activation of T cells##NM_001014987|LAT|27040|linker for activation of T cells##NM_001014988|LAT|27040|linker for activation of T cells##NM_014387|LAT|27040|linker for activation of T cells##AJ223280|LAT|27040|linker for activation of T cells##BC011563|LAT|27040|linker for activation of T cells##NM_001014989|LAT|27040|linker for activation of T cells##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3	0.0	
chr16	73081596	73081777	reg1028859.p1	3.462	+	TSC_hg19_v1_chr16_-_72991733 BC029653	-89981	-	TSC_hg19_v1_chr16_+_72699031 AK021563	-382622	+	AK122925 NM_001160213	-875338	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	535	-	D10250 NM_001164766 TSC_hg19_v1_chr16_-_73092633	10900	-	TSC_hg19_v1_chr16_+_74330711 NM_002811 BC000338 BC012606 AK315381 AK301996	1249007	+	BC029653|ZFHX3|463|zinc finger homeobox 3##AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3##D10250|ZFHX3|463|zinc finger homeobox 3##NM_001164766|ZFHX3|463|zinc finger homeobox 3##NM_002811|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC000338|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##BC012606|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK315381|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7##AK301996|PSMD7|5713|proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	0.045715	
chr17	38252375	38252507	reg1038053.p1	3.462	+	TSC_hg19_v1_chr17_+_38230679 J03239 DQ892512 DQ895726 AB307686 AB489181 CR541915 CU674114 HQ692859	-21732	+	TSC_hg19_v1_chr17_+_38219217 BC035137 NM_001190918 NM_003250 NM_199334 X55005 BC000261 BC002728 M24899 Y00479	-33268	+	AK290530 NM_001190919 AB209346	-33982	+	TSC_hg19_v1_chr17_-_38252967 AY429554	540	-	M34339 X72631 TSC_hg19_v1_chr17_-_38256833 BC047875 AK315270 AK300155 BC056148	4281	-	TSC_hg19_v1_chr17_-_38256983 M24898 NM_021724	4533	-	J03239|THRA|7067|thyroid hormone receptor, alpha##DQ892512|THRA|7067|thyroid hormone receptor, alpha##DQ895726|THRA|7067|thyroid hormone receptor, alpha##AB307686|THRA|7067|thyroid hormone receptor, alpha##CR541915|THRA|7067|thyroid hormone receptor, alpha##HQ692859|THRA|7067|thyroid hormone receptor, alpha##BC035137|THRA|7067|thyroid hormone receptor, alpha##NM_001190918|THRA|7067|thyroid hormone receptor, alpha##NM_003250|THRA|7067|thyroid hormone receptor, alpha##NM_199334|THRA|7067|thyroid hormone receptor, alpha##X55005|THRA|7067|thyroid hormone receptor, alpha##BC000261|THRA|7067|thyroid hormone receptor, alpha##BC002728|THRA|7067|thyroid hormone receptor, alpha##M24899|THRA|7067|thyroid hormone receptor, alpha##Y00479|THRA|7067|thyroid hormone receptor, alpha##AK290530|THRA|7067|thyroid hormone receptor, alpha##NM_001190919|THRA|7067|thyroid hormone receptor, alpha##AB209346|THRA|7067|thyroid hormone receptor, alpha##AY429554|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##M34339|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##X72631|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC047875|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK315270|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##AK300155|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##BC056148|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##M24898|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1##NM_021724|NR1D1|9572|nuclear receptor subfamily 1, group D, member 1	0.0	
chr17	77707043	77707110	reg1036226.p1	3.462	+	AY230663 BC041453 NM_178543 AY358622	-2187	+	NM_001082575	-228514	-	TSC_hg19_v1_chr17_+_77071020 AK025518 NM_001042573 AK301115 AF512564	-636046	+	TSC_hg19_v1_chr17_+_77751988 AX721084 AX721090 NM_005189 NM_032647 BC004252 BC119759 BC119760 AB463499 CU678640 EU446542	44905	+	TSC_hg19_v1_chr17_-_77770845 AB384672 CU679333 EU446831 BC008937 BC019289 AF266479 BC009376 AF174482 AK074560 NM_020649	63831	-	AY390430 CU677141 AB463501 BC014967 TSC_hg19_v1_chr17_-_77813168 NM_003655 EU439707 AF013956	106066	-	AY230663|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##BC041453|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_178543|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##AY358622|ENPP7|339221|ectonucleotide pyrophosphatase/phosphodiesterase 7##NM_001082575|RBFOX3|146713|RNA binding protein, fox-1 homolog (C. elegans) 3##AK025518|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_001042573|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AK301115|ENGASE|64772|endo-beta-N-acetylglucosaminidase##AF512564|ENGASE|64772|endo-beta-N-acetylglucosaminidase##NM_005189|CBX2|84733|chromobox homolog 2##NM_032647|CBX2|84733|chromobox homolog 2##BC004252|CBX2|84733|chromobox homolog 2##BC119759|CBX2|84733|chromobox homolog 2##BC119760|CBX2|84733|chromobox homolog 2##EU446542|CBX2|84733|chromobox homolog 2##EU446831|CBX8|57332|chromobox homolog 8##BC008937|CBX8|57332|chromobox homolog 8##BC019289|CBX8|57332|chromobox homolog 8##AF266479|CBX8|57332|chromobox homolog 8##BC009376|CBX8|57332|chromobox homolog 8##AF174482|CBX8|57332|chromobox homolog 8##AK074560|CBX8|57332|chromobox homolog 8##NM_020649|CBX8|57332|chromobox homolog 8##AY390430|CBX4|8535|chromobox homolog 4##BC014967|CBX4|8535|chromobox homolog 4##NM_003655|CBX4|8535|chromobox homolog 4##EU439707|CBX4|8535|chromobox homolog 4##AF013956|CBX4|8535|chromobox homolog 4	0.0	
chr17	8114077	8114193	reg1043206.p1	3.462	+	BC009751 AB011446 BC080581 AB011450 AF004022 AF015254 BC000442 NM_004217 TSC_hg19_v1_chr17_-_8113894 AK314889 AK297976 BC013300	-252	-	TSC_hg19_v1_chr17_-_8093499 NM_017622	-20608	-	BC009261 AK000021 AK222506 TSC_hg19_v1_chr17_-_8093462 BC018880 BC070272	-20731	-	DQ451688 FJ790670 AL831955 TSC_hg19_v1_chr17_-_8151371 AK091077 AX746768 BC111783	37227	-	TSC_hg19_v1_chr17_-_8151373 NM_025099	37257	-	TSC_hg19_v1_chr17_+_8152624 AK292804 NM_012393 AK295895 AK292402 AB002359 BC146768 BC167158	38482	+	BC009751|AURKB|9212|aurora kinase B##AB011446|AURKB|9212|aurora kinase B##BC080581|AURKB|9212|aurora kinase B##AB011450|AURKB|9212|aurora kinase B##AF004022|AURKB|9212|aurora kinase B##AF015254|AURKB|9212|aurora kinase B##BC000442|AURKB|9212|aurora kinase B##NM_004217|AURKB|9212|aurora kinase B##AK314889|AURKB|9212|aurora kinase B##AK297976|AURKB|9212|aurora kinase B##BC013300|AURKB|9212|aurora kinase B##NM_017622|C17orf59|54785|chromosome 17 open reading frame 59##BC009261|C17orf59|54785|chromosome 17 open reading frame 59##AK000021|C17orf59|54785|chromosome 17 open reading frame 59##AK222506|C17orf59|54785|chromosome 17 open reading frame 59##BC018880|C17orf59|54785|chromosome 17 open reading frame 59##BC070272|C17orf59|54785|chromosome 17 open reading frame 59##DQ451688|CTC1|80169|CTS telomere maintenance complex component 1##FJ790670|CTC1|80169|CTS telomere maintenance complex component 1##AL831955|CTC1|80169|CTS telomere maintenance complex component 1##AK091077|CTC1|80169|CTS telomere maintenance complex component 1##BC111783|CTC1|80169|CTS telomere maintenance complex component 1##NM_025099|CTC1|80169|CTS telomere maintenance complex component 1##AK292804|PFAS|5198|phosphoribosylformylglycinamidine synthase##NM_012393|PFAS|5198|phosphoribosylformylglycinamidine synthase##AK295895|PFAS|5198|phosphoribosylformylglycinamidine synthase##AK292402|PFAS|5198|phosphoribosylformylglycinamidine synthase##AB002359|PFAS|5198|phosphoribosylformylglycinamidine synthase##BC146768|PFAS|5198|phosphoribosylformylglycinamidine synthase##BC167158|PFAS|5198|phosphoribosylformylglycinamidine synthase	0.0	
chr17	8710595	8710695	reg1035034.p2	3.462	+	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-8093	-	BC146949 BC146966 BC171861 NM_001128076	-48769	-	BC029224 AK057296 NM_001158261 NM_144681	-62517	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	60339	-	AY725853 AF128881 NM_014308	105171	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	158336	-	BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##BC146949|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC146966|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC171861|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##NM_001128076|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC029224|CCDC42|146849|coiled-coil domain containing 42##AK057296|CCDC42|146849|coiled-coil domain containing 42##NM_001158261|CCDC42|146849|coiled-coil domain containing 42##NM_144681|CCDC42|146849|coiled-coil domain containing 42##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5	0.0	
chr19	41836470	41836540	reg1040374.p1	3.462	+	TSC_hg19_v1_chr19_+_41816132 BC011577 NM_052848	-20421	+	BC129981 TSC_hg19_v1_chr19_-_41813133	-23443	-	TSC_hg19_v1_chr19_+_41798338 AL050146	-38233	+	BT007245 CU692504 TSC_hg19_v1_chr19_-_41858962 EU832132 EU832225	22484	-	TSC_hg19_v1_chr19_-_41859306 BC022242 AK291907	22784	-	TSC_hg19_v1_chr19_-_41859420 BC000125 BC001180	22893	-	BC011577|CCDC97|90324|coiled-coil domain containing 97##NM_052848|CCDC97|90324|coiled-coil domain containing 97##AL050146|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##BT007245|TGFB1|7040|transforming growth factor, beta 1##EU832132|TGFB1|7040|transforming growth factor, beta 1##EU832225|TGFB1|7040|transforming growth factor, beta 1##BC022242|TGFB1|7040|transforming growth factor, beta 1##AK291907|TGFB1|7040|transforming growth factor, beta 1##BC000125|TGFB1|7040|transforming growth factor, beta 1##BC001180|TGFB1|7040|transforming growth factor, beta 1	0.0	
chr19	47690003	47690096	reg1038550.p1	3.462	+	TSC_hg19_v1_chr19_+_47634184 AB385085 DQ891751 DQ894932 CU676224 AF110956 BT007290	-55827	+	TSC_hg19_v1_chr19_+_47634171 BC003611	-55888	+	TSC_hg19_v1_chr19_+_47634145 AK315624 AF090385 AF046025 AK090645	-55910	+	U82987 BC136481 TSC_hg19_v1_chr19_-_47734457 AF332558 NM_014417	44296	-	AB590880 AK298837 AF354654 AF354655 AF354656 NM_001127240 NM_001127241 NM_001127242	45891	-	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	69712	+	DQ891751|SAE1|10055|SUMO1 activating enzyme subunit 1##DQ894932|SAE1|10055|SUMO1 activating enzyme subunit 1##AF110956|SAE1|10055|SUMO1 activating enzyme subunit 1##BT007290|SAE1|10055|SUMO1 activating enzyme subunit 1##BC003611|SAE1|10055|SUMO1 activating enzyme subunit 1##AK315624|SAE1|10055|SUMO1 activating enzyme subunit 1##AF090385|SAE1|10055|SUMO1 activating enzyme subunit 1##AF046025|SAE1|10055|SUMO1 activating enzyme subunit 1##AK090645|SAE1|10055|SUMO1 activating enzyme subunit 1##U82987|BBC3|27113|BCL2 binding component 3##BC136481|BBC3|27113|BCL2 binding component 3##AF332558|BBC3|27113|BCL2 binding component 3##NM_014417|BBC3|27113|BCL2 binding component 3##AK298837|BBC3|27113|BCL2 binding component 3##AF354654|BBC3|27113|BCL2 binding component 3##AF354655|BBC3|27113|BCL2 binding component 3##AF354656|BBC3|27113|BCL2 binding component 3##NM_001127240|BBC3|27113|BCL2 binding component 3##NM_001127241|BBC3|27113|BCL2 binding component 3##NM_001127242|BBC3|27113|BCL2 binding component 3##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9	0.0	
chr3	42623647	42623788	reg1025022.p1	3.462	+	TSC_hg19_v1_chr3_-_42623460 BC006178 BC018437 AY359041 AK292856 AK293133 AK074576 NM_001201584 NM_004206 NM_032970	-256	-	TSC_hg19_v1_chr3_+_42544134 AK298115 AK314334 L13288 BC064424 X75299 AB590664 EF577396	-79538	+	TSC_hg19_v1_chr3_+_42544108 AK294609 NM_001251883 NM_001251884 NM_001251885 NM_004624 AK293548	-79610	+	NM_016305 AF201950 TSC_hg19_v1_chr3_+_42632337	8600	+	TSC_hg19_v1_chr3_+_42632351 BC017804 AK312225 DQ891965 EU176663 BC020444	8662	+	L04288 TSC_hg19_v1_chr3_+_42642180 AK097208 BX538094 NM_005385 AK292017 BC144518 BX957218 CR749571 AB209888 BC072680 BC051318 BC035644 BC020672	18452	+	BC006178|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##BC018437|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AY359041|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK292856|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK293133|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK074576|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_001201584|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_004206|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##NM_032970|SEC22C|9117|SEC22 vesicle trafficking protein homolog C (S. cerevisiae)##AK298115|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK314334|VIPR1|7433|vasoactive intestinal peptide receptor 1##L13288|VIPR1|7433|vasoactive intestinal peptide receptor 1##BC064424|VIPR1|7433|vasoactive intestinal peptide receptor 1##X75299|VIPR1|7433|vasoactive intestinal peptide receptor 1##EF577396|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK294609|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251883|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251884|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_001251885|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_004624|VIPR1|7433|vasoactive intestinal peptide receptor 1##AK293548|VIPR1|7433|vasoactive intestinal peptide receptor 1##NM_016305|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##AF201950|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##BC017804|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##AK312225|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##DQ891965|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##EU176663|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##BC020444|SS18L2|51188|synovial sarcoma translocation gene on chromosome 18-like 2##L04288|NKTR|4820|natural killer-tumor recognition sequence##AK097208|NKTR|4820|natural killer-tumor recognition sequence##BX538094|NKTR|4820|natural killer-tumor recognition sequence##NM_005385|NKTR|4820|natural killer-tumor recognition sequence##AK292017|NKTR|4820|natural killer-tumor recognition sequence##BC144518|NKTR|4820|natural killer-tumor recognition sequence##BX957218|NKTR|4820|natural killer-tumor recognition sequence##CR749571|NKTR|4820|natural killer-tumor recognition sequence##AB209888|NKTR|4820|natural killer-tumor recognition sequence##BC072680|NKTR|4820|natural killer-tumor recognition sequence##BC051318|NKTR|4820|natural killer-tumor recognition sequence##BC035644|NKTR|4820|natural killer-tumor recognition sequence##BC020672|NKTR|4820|natural killer-tumor recognition sequence	0.019163	
chr5	148931189	148931306	reg1024594.p1	3.462	+	TSC_hg19_v1_chr5_-_148931006 NM_001025105 NM_001892	-241	-	TSC_hg19_v1_chr5_-_148930950 AK294942	-281	-	AF218004 TSC_hg19_v1_chr5_-_148930935 AK303794 BC021971 BC025371 BC007246	-323	-	AK300559 AK316002 BC041325 NM_001001669	29837	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	178580	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	178629	+	NM_001025105|CSNK1A1|1452|casein kinase 1, alpha 1##NM_001892|CSNK1A1|1452|casein kinase 1, alpha 1##AK294942|CSNK1A1|1452|casein kinase 1, alpha 1##AF218004|CSNK1A1|1452|casein kinase 1, alpha 1##AK303794|CSNK1A1|1452|casein kinase 1, alpha 1##BC021971|CSNK1A1|1452|casein kinase 1, alpha 1##BC025371|CSNK1A1|1452|casein kinase 1, alpha 1##BC007246|CSNK1A1|1452|casein kinase 1, alpha 1##AK300559|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##AK316002|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##BC041325|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##NM_001001669|ARHGEF37|389337|Rho guanine nucleotide exchange factor (GEF) 37##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta	0.0	
chr6	166121063	166121189	reg1039302.p2	3.462	+	AY203946 TSC_hg19_v1_chr6_-_166076051	-45074	-	AB026816 AF127480 NM_006661 AB020593 NM_001130690 TSC_hg19_v1_chr6_-_166075763	-45430	-	CU693196 TSC_hg19_v1_chr6_-_165723095 BC026278 NM_144980	-398034	-	TSC_hg19_v1_chr6_-_166401424 AK289375	280307	-	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	280408	-	BC098425 NM_003181	461003	-	AY203946|LOC100132188|100132188|LP7097##AB026816|PDE10A|10846|phosphodiesterase 10A##AF127480|PDE10A|10846|phosphodiesterase 10A##NM_006661|PDE10A|10846|phosphodiesterase 10A##AB020593|PDE10A|10846|phosphodiesterase 10A##NM_001130690|PDE10A|10846|phosphodiesterase 10A##BC026278|C6orf118|168090|chromosome 6 open reading frame 118##NM_144980|C6orf118|168090|chromosome 6 open reading frame 118##AK289375|LINC00473|90632|long intergenic non-protein coding RNA 473##BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)	0.0	
chr6	74290091	74290161	reg1037154.p1	3.462	+	BC012891 BC010735 BC071619 BC082268 BC071741 BC008587 BC018150 BC018641 BC019669 BC029997 BC038339 BC072385 BC014224 BC018850 BC009875 BC035877 BC111051 X03558 AK315827 TSC_hg19_v1_chr6_-_74230757 AK223030 AK024888 AK222551 AK223046 AK297878 AK300922 BC021686 BC070131 AK026650 AK055058 AK058051 AK058082 AK098510 AK098518 AK098623 AK127384 AK222515 AK222523 AK222982 AK289374 AK289442 AK290691 AK304214 BC028674 BC066893 BC066894 BC070500 D28375 NM_001402	-59380	-	TSC_hg19_v1_chr6_-_74230163 AY043301	-59956	-	AK222519 BC020477 DQ867534 AF328730 AF397403 TSC_hg19_v1_chr6_-_74229235	-60957	-	DQ891462 EU176585 TSC_hg19_v1_chr6_-_74363649	73504	-	BC020961 AK075320 TSC_hg19_v1_chr6_-_74363692 AK315789 AK294068 NM_012434 AJ387747	73654	-	TSC_hg19_v1_chr6_+_74405513 NM_001159587 NM_001159588 NM_133493	115439	+	BC012891|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC010735|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC071619|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC082268|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC071741|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC008587|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018150|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018641|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC019669|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC029997|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC038339|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC072385|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC014224|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC018850|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC009875|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC035877|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC111051|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##X03558|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK315827|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK223030|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK024888|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222551|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK223046|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK297878|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK300922|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC021686|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC070131|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK026650|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK055058|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK058051|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK058082|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098510|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098518|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK098623|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK127384|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222515|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222523|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222982|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK289374|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK289442|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK290691|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK304214|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC028674|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC066893|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC066894|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##NM_001402|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AY043301|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AK222519|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##BC020477|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##DQ867534|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AF328730|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AF397403|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##DQ891462|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##EU176585|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##BC020961|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AK075320|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AK315789|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AK294068|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##NM_012434|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##AJ387747|SLC17A5|26503|solute carrier family 17 (anion/sugar transporter), member 5##NM_001159587|CD109|135228|CD109 molecule##NM_001159588|CD109|135228|CD109 molecule##NM_133493|CD109|135228|CD109 molecule	0.022541	
chr7	143709107	143709188	reg1029378.p1	3.462	+	BC137042 BC137047 NM_001005281	-8092	+	BC104975 NM_012369	-52128	+	BC136812 BC136813 NM_001004685	-76856	+	BC136858 BC136860 NM_012365	38330	+	BC136814 BC136829 NM_001004488	62146	+	BC136902 BC136903 NM_001004135	83023	+	BC137042|OR6B1|135946|olfactory receptor, family 6, subfamily B, member 1##BC137047|OR6B1|135946|olfactory receptor, family 6, subfamily B, member 1##NM_001005281|OR6B1|135946|olfactory receptor, family 6, subfamily B, member 1##BC104975|OR2F1|26211|olfactory receptor, family 2, subfamily F, member 1##NM_012369|OR2F1|26211|olfactory receptor, family 2, subfamily F, member 1##BC136812|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##BC136813|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##NM_001004685|OR2F2|135948|olfactory receptor, family 2, subfamily F, member 2##BC136858|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5##BC136860|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5##NM_012365|OR2A5|393046|olfactory receptor, family 2, subfamily A, member 5##BC136814|OR2A25|392138|olfactory receptor, family 2, subfamily A, member 25##BC136829|OR2A25|392138|olfactory receptor, family 2, subfamily A, member 25##NM_001004488|OR2A25|392138|olfactory receptor, family 2, subfamily A, member 25##BC136902|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##BC136903|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12##NM_001004135|OR2A12|346525|olfactory receptor, family 2, subfamily A, member 12	0.0	
chr8	102923990	102924170	reg1038173.p2	3.462	+	NM_032041	-120642	-	AK055073 AK314523 TSC_hg19_v1_chr8_-_102803198	-120880	-	AB209015 TSC_hg19_v1_chr8_-_102803178 AL136612	-120897	-	AK096515 TSC_hg19_v1_chr8_-_103136490 AF251061 BC036098 BC063428 NM_001040624 NM_001040625 NM_001040626 NM_001040627 NM_001040628 NM_001040629	212443	-	NM_001040630	213054	-	AK304354 CR627376 NM_001172477 AB163437 AB163438 AB166669 AB166670 AB166671 EU831630 EU831715 HQ258190 AB527865 AK001965 TSC_hg19_v1_chr8_-_103251168 AL137348 BC108261 BC042948 BC117496 BC130628 AB036063 NM_001172478 NM_015713	327093	-	NM_032041|NCALD|83988|neurocalcin delta##AK055073|NCALD|83988|neurocalcin delta##AK314523|NCALD|83988|neurocalcin delta##AB209015|NCALD|83988|neurocalcin delta##AL136612|NCALD|83988|neurocalcin delta##AK096515|NCALD|83988|neurocalcin delta##AF251061|NCALD|83988|neurocalcin delta##BC036098|NCALD|83988|neurocalcin delta##BC063428|NCALD|83988|neurocalcin delta##NM_001040624|NCALD|83988|neurocalcin delta##NM_001040625|NCALD|83988|neurocalcin delta##NM_001040626|NCALD|83988|neurocalcin delta##NM_001040627|NCALD|83988|neurocalcin delta##NM_001040628|NCALD|83988|neurocalcin delta##NM_001040629|NCALD|83988|neurocalcin delta##NM_001040630|NCALD|83988|neurocalcin delta##AK304354|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##CR627376|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172477|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163437|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB163438|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166669|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166670|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB166671|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831630|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##EU831715|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##HQ258190|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AK001965|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AL137348|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC108261|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC042948|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC117496|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##BC130628|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##AB036063|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_001172478|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)##NM_015713|RRM2B|50484|ribonucleotide reductase M2 B (TP53 inducible)	0.0	
chr8	95959706	95959887	reg1013592.p2	3.462	+	TSC_hg19_v1_chr8_-_95907430 BC007015 BC020729 NM_057749	-52344	-	TSC_hg19_v1_chr8_+_95835588 BC136754 BC144396 BC144397	-124096	+	TSC_hg19_v1_chr8_+_95835522 BC099915 AB161944 NM_017864	-124248	+	TSC_hg19_v1_chr8_-_95961604 AK315071 AF409114 AF409115 AK125880 NM_001135733 NM_033285	1861	-	TSC_hg19_v1_chr8_+_96037224 NM_152416 BC028166 DQ891641 DQ894830 AK298631 AK301414	77508	+	TSC_hg19_v1_chr8_+_96145948 NM_024613	186149	+	BC007015|CCNE2|9134|cyclin E2##BC020729|CCNE2|9134|cyclin E2##NM_057749|CCNE2|9134|cyclin E2##BC136754|INTS8|55656|integrator complex subunit 8##BC144396|INTS8|55656|integrator complex subunit 8##BC144397|INTS8|55656|integrator complex subunit 8##BC099915|INTS8|55656|integrator complex subunit 8##AB161944|INTS8|55656|integrator complex subunit 8##NM_017864|INTS8|55656|integrator complex subunit 8##AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_152416|C8orf38|137682|chromosome 8 open reading frame 38##BC028166|C8orf38|137682|chromosome 8 open reading frame 38##DQ891641|C8orf38|137682|chromosome 8 open reading frame 38##DQ894830|C8orf38|137682|chromosome 8 open reading frame 38##AK298631|C8orf38|137682|chromosome 8 open reading frame 38##AK301414|C8orf38|137682|chromosome 8 open reading frame 38##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2	0.0	
chr10	75910598	75910740	reg1043267.p2	3.461	+	TSC_hg19_v1_chr10_-_75910513 BC067127	-157	-	TSC_hg19_v1_chr10_+_75757873 AK304823 NM_003373 NM_014000 AK300280 AK296509 BC099919 BC039174 M33308 AB385172 DQ894680	-152763	+	BC049374 NM_001001791	-228135	-	TSC_hg19_v1_chr10_-_75910561 AK315597 AK026983 AK299352 BC026232 NM_012095 NM_207012	19	-	TSC_hg19_v1_chr10_+_75910978 NM_001202450 NM_006721 AK301590 U90338 U33936	300	+	TSC_hg19_v1_chr10_+_75936308 NM_001123 NM_001202449	25598	+	BC067127|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK304823|VCL|7414|vinculin##NM_003373|VCL|7414|vinculin##NM_014000|VCL|7414|vinculin##AK300280|VCL|7414|vinculin##AK296509|VCL|7414|vinculin##BC039174|VCL|7414|vinculin##M33308|VCL|7414|vinculin##DQ894680|VCL|7414|vinculin##BC049374|C10orf55|414236|chromosome 10 open reading frame 55##NM_001001791|C10orf55|414236|chromosome 10 open reading frame 55##AK315597|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK026983|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##AK299352|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##BC026232|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_012095|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_207012|AP3M1|26985|adaptor-related protein complex 3, mu 1 subunit##NM_001202450|ADK|132|adenosine kinase##NM_006721|ADK|132|adenosine kinase##AK301590|ADK|132|adenosine kinase##U90338|ADK|132|adenosine kinase##U33936|ADK|132|adenosine kinase##NM_001123|ADK|132|adenosine kinase##NM_001202449|ADK|132|adenosine kinase	0.0	
chr11	123524593	123524729	reg1035601.p1	3.461	+	AB033027 TSC_hg19_v1_chr11_+_123431038	-93624	+	TSC_hg19_v1_chr11_+_123430975 AK297606 AK307795	-93688	+	TSC_hg19_v1_chr11_+_123396479 NM_020716 BC105741 BC105931 BC105932 BC107480	-128157	+	AJ243396 AB032984 TSC_hg19_v1_chr11_-_123525042	300	-	TSC_hg19_v1_chr11_-_123525303 AK314513 AL136589 NM_001040151 NM_018400	646	-	AK023751 TSC_hg19_v1_chr11_-_123612326 BC013382 NM_003455	87684	-	AB033027|GRAMD1B|57476|GRAM domain containing 1B##AK297606|GRAMD1B|57476|GRAM domain containing 1B##AK307795|GRAMD1B|57476|GRAM domain containing 1B##NM_020716|GRAMD1B|57476|GRAM domain containing 1B##BC105741|GRAMD1B|57476|GRAM domain containing 1B##BC105931|GRAMD1B|57476|GRAM domain containing 1B##BC105932|GRAMD1B|57476|GRAM domain containing 1B##BC107480|GRAMD1B|57476|GRAM domain containing 1B##AJ243396|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AB032984|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AK314513|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AL136589|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_001040151|SCN3B|55800|sodium channel, voltage-gated, type III, beta##NM_018400|SCN3B|55800|sodium channel, voltage-gated, type III, beta##AK023751|ZNF202|7753|zinc finger protein 202##BC013382|ZNF202|7753|zinc finger protein 202##NM_003455|ZNF202|7753|zinc finger protein 202	0.206578	
chr1	12128543	12128616	reg1038864.p2	3.461	+	M83554 NM_001243 BC136400 BC171762 S75768	-5035	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-49009	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-49045	+	D86042 BC063482 NM_152942 BC073839 BC141804	57437	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	98482	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	98532	+	M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr12	9787103	9787195	reg1007327.p2	3.461	+	BC027885 BC113997 BC114516 U11276 NM_002258 AK292022	-26653	-	TSC_hg19_v1_chr12_-_9600810 BC035635 BC128040 BC111733	-186351	-	TSC_hg19_v1_chr12_+_9436619 AK123583 AK309820	-350524	+	TSC_hg19_v1_chr12_+_9800760 AK096274	13747	+	BC063128 NM_001197318 NM_013269 AK310150 NM_001004419 AK310554 AK313554 BC019883 AF133299 AF285087 CU676474 FN813349 FN813350 FN813351 NM_001197317 NM_001197319	35118	+	AF518873 BC093857 BC093859 NM_001253748 NM_001253750 NM_172004	98727	-	BC027885|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC113997|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC114516|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##U11276|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##NM_002258|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##AK292022|KLRB1|3820|killer cell lectin-like receptor subfamily B, member 1##BC035635|DDX12P|440081|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12, pseudogene##BC111733|DDX11|1663|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11##AK309820|LOC642846|642846|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11-like##AK096274|LOC374443|374443|CLR pseudogene##BC063128|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197318|CLEC2D|29121|C-type lectin domain family 2, member D##NM_013269|CLEC2D|29121|C-type lectin domain family 2, member D##AK310150|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001004419|CLEC2D|29121|C-type lectin domain family 2, member D##AK310554|CLEC2D|29121|C-type lectin domain family 2, member D##AK313554|CLEC2D|29121|C-type lectin domain family 2, member D##BC019883|CLEC2D|29121|C-type lectin domain family 2, member D##AF133299|CLEC2D|29121|C-type lectin domain family 2, member D##AF285087|CLEC2D|29121|C-type lectin domain family 2, member D##FN813349|CLEC2D|29121|C-type lectin domain family 2, member D##FN813350|CLEC2D|29121|C-type lectin domain family 2, member D##FN813351|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197317|CLEC2D|29121|C-type lectin domain family 2, member D##NM_001197319|CLEC2D|29121|C-type lectin domain family 2, member D##AF518873|CLECL1|160365|C-type lectin-like 1##BC093857|CLECL1|160365|C-type lectin-like 1##BC093859|CLECL1|160365|C-type lectin-like 1##NM_001253748|CLECL1|160365|C-type lectin-like 1##NM_001253750|CLECL1|160365|C-type lectin-like 1##NM_172004|CLECL1|160365|C-type lectin-like 1	0.0	
chr15	59543784	59543872	reg1041505.p2	3.461	+	AY642121 BC022034 AY009108 NM_033195 AK312777 AK058192	-44776	+	TSC_hg19_v1_chr15_+_59397344 NM_004701 AK001404 AL080146 BC105086 BC105112 AF087910 AK222611 AB020981 AF002822 AB587333 AM393577 BT019458 CR533527	-146457	+	TSC_hg19_v1_chr15_+_59359061 AK095327	-184750	+	AB290177 TSC_hg19_v1_chr15_-_59665055	121226	-	TSC_hg19_v1_chr15_-_59665065 AK291688	121238	-	BC067835 BC098392 TSC_hg19_v1_chr15_-_59665071 NM_004998 U14391	121242	-	AY642121|LDHAL6B|92483|lactate dehydrogenase A-like 6B##BC022034|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AY009108|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_033195|LDHAL6B|92483|lactate dehydrogenase A-like 6B##AK058192|LDHAL6B|92483|lactate dehydrogenase A-like 6B##NM_004701|CCNB2|9133|cyclin B2##AK001404|CCNB2|9133|cyclin B2##AL080146|CCNB2|9133|cyclin B2##BC105086|CCNB2|9133|cyclin B2##BC105112|CCNB2|9133|cyclin B2##AF087910|CCNB2|9133|cyclin B2##AK222611|CCNB2|9133|cyclin B2##AB020981|CCNB2|9133|cyclin B2##AF002822|CCNB2|9133|cyclin B2##AM393577|CCNB2|9133|cyclin B2##BT019458|CCNB2|9133|cyclin B2##CR533527|CCNB2|9133|cyclin B2##AK095327|RNF111|54778|ring finger protein 111##AB290177|MYO1E|4643|myosin IE##AK291688|MYO1E|4643|myosin IE##BC098392|MYO1E|4643|myosin IE##NM_004998|MYO1E|4643|myosin IE##U14391|MYO1E|4643|myosin IE	0.0	
chr16	3224386	3224494	reg1037885.p1	3.461	+	CU675598 TSC_hg19_v1_chr16_-_3191371	-33081	-	TSC_hg19_v1_chr16_+_3185119 NM_001134655 BC007287 BC116445 AK291789 AK055337 AK289834	-39281	+	TSC_hg19_v1_chr16_+_3185058 NM_004220	-39388	+	BC069335 NM_012360 Y14442	29806	+	AK315036 BC032575 AF060866 TSC_hg19_v1_chr16_-_3285159 BC025293 BC012909 AK056010 NM_001145447 NM_003454	60688	-	Y14443 BC054005 NM_001145448 NM_198088 NM_001145446 NM_198087	60967	-	NM_001134655|ZNF213|7760|zinc finger protein 213##BC007287|ZNF213|7760|zinc finger protein 213##AK291789|ZNF213|7760|zinc finger protein 213##AK055337|ZNF213|7760|zinc finger protein 213##AK289834|ZNF213|7760|zinc finger protein 213##NM_004220|ZNF213|7760|zinc finger protein 213##BC069335|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##NM_012360|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##Y14442|OR1F1|4992|olfactory receptor, family 1, subfamily F, member 1##AK315036|ZNF200|7752|zinc finger protein 200##BC032575|ZNF200|7752|zinc finger protein 200##AF060866|ZNF200|7752|zinc finger protein 200##BC025293|ZNF200|7752|zinc finger protein 200##BC012909|ZNF200|7752|zinc finger protein 200##AK056010|ZNF200|7752|zinc finger protein 200##NM_001145447|ZNF200|7752|zinc finger protein 200##NM_003454|ZNF200|7752|zinc finger protein 200##Y14443|ZNF200|7752|zinc finger protein 200##BC054005|ZNF200|7752|zinc finger protein 200##NM_001145448|ZNF200|7752|zinc finger protein 200##NM_198088|ZNF200|7752|zinc finger protein 200##NM_001145446|ZNF200|7752|zinc finger protein 200##NM_198087|ZNF200|7752|zinc finger protein 200	0.986251	CTCF.p2:39:0.986
chr19	50143836	50143953	reg1041466.p1	3.461	+	TSC_hg19_v1_chr19_-_50143401 AF493920 BT006805 CR541944 CR541967 AB528722 DQ890730 DQ892428 DQ895642 BC016286 BC016318 NM_006270	-517	-	NM_020719	-48983	+	NM_000951 BC026032	-59287	+	TSC_hg19_v1_chr19_+_50145476 AK024444 NM_021228 BC011662	1536	+	TSC_hg19_v1_chr19_-_50167984 AB102884 AB102887 CU679345 AB385059 DQ893455 DQ896306	24143	-	NM_001040668 NM_138639	24504	+	AF493920|RRAS|6237|related RAS viral (r-ras) oncogene homolog##BT006805|RRAS|6237|related RAS viral (r-ras) oncogene homolog##CR541944|RRAS|6237|related RAS viral (r-ras) oncogene homolog##CR541967|RRAS|6237|related RAS viral (r-ras) oncogene homolog##DQ890730|RRAS|6237|related RAS viral (r-ras) oncogene homolog##DQ892428|RRAS|6237|related RAS viral (r-ras) oncogene homolog##DQ895642|RRAS|6237|related RAS viral (r-ras) oncogene homolog##BC016286|RRAS|6237|related RAS viral (r-ras) oncogene homolog##BC016318|RRAS|6237|related RAS viral (r-ras) oncogene homolog##NM_006270|RRAS|6237|related RAS viral (r-ras) oncogene homolog##NM_020719|PRR12|57479|proline rich 12##NM_000951|PRRG2|5639|proline rich Gla (G-carboxyglutamic acid) 2##BC026032|PRRG2|5639|proline rich Gla (G-carboxyglutamic acid) 2##AK024444|SCAF1|58506|SR-related CTD-associated factor 1##NM_021228|SCAF1|58506|SR-related CTD-associated factor 1##BC011662|SCAF1|58506|SR-related CTD-associated factor 1##AB102884|IRF3|3661|interferon regulatory factor 3##AB102887|IRF3|3661|interferon regulatory factor 3##DQ893455|IRF3|3661|interferon regulatory factor 3##DQ896306|IRF3|3661|interferon regulatory factor 3##NM_001040668|BCL2L12|83596|BCL2-like 12 (proline rich)##NM_138639|BCL2L12|83596|BCL2-like 12 (proline rich)	0.0	
chr22	38187941	38188026	reg1044345.p1	3.461	+	TSC_hg19_v1_chr22_+_38142316 BC003618	-45666	+	TSC_hg19_v1_chr22_+_38142255 AF281030	-45727	+	TSC_hg19_v1_chr22_+_38142248 BC022200	-45737	+	NM_005318 TSC_hg19_v1_chr22_+_38201113	13132	+	TSC_hg19_v1_chr22_+_38201235 AK091372 AK299209 AK312583 AX746942 BC000145 BC029046	13274	+	TSC_hg19_v1_chr22_+_38201323 CR456502 CU013100 CU013388 DQ890977 DQ894151 AB385232 CR542220	13442	+	BC003618|TRIOBP|11078|TRIO and F-actin binding protein##AF281030|TRIOBP|11078|TRIO and F-actin binding protein##BC022200|TRIOBP|11078|TRIO and F-actin binding protein##NM_005318|H1F0|3005|H1 histone family, member 0##AK091372|H1F0|3005|H1 histone family, member 0##AK312583|H1F0|3005|H1 histone family, member 0##BC000145|H1F0|3005|H1 histone family, member 0##BC029046|H1F0|3005|H1 histone family, member 0##CR456502|H1F0|3005|H1 histone family, member 0##CU013100|H1F0|3005|H1 histone family, member 0##CU013388|H1F0|3005|H1 histone family, member 0##DQ890977|H1F0|3005|H1 histone family, member 0##DQ894151|H1F0|3005|H1 histone family, member 0##CR542220|H1F0|3005|H1 histone family, member 0	0.191951	
chr2	37772696	37772807	reg1036939.p2	3.461	+	NM_012413 AK290605 BC015460 BC047756 BC020456 X71125 BC036721 CU690490	-200938	+	BC030706 BC012820 AB015982 NM_005813	-228558	-	TSC_hg19_v1_chr2_+_37458826 BX538031 AK302150 AK294240	-313905	+	AK128735 BC019270 AK313483 TSC_hg19_v1_chr2_-_37898786	126028	-	TSC_hg19_v1_chr2_-_37899342 AL136842 NM_006449	126638	-	TSC_hg19_v1_chr2_+_38152420 AY358269 NM_001170791 AK095462	379681	+	NM_012413|QPCT|25797|glutaminyl-peptide cyclotransferase##AK290605|QPCT|25797|glutaminyl-peptide cyclotransferase##BC015460|QPCT|25797|glutaminyl-peptide cyclotransferase##BC047756|QPCT|25797|glutaminyl-peptide cyclotransferase##BC020456|QPCT|25797|glutaminyl-peptide cyclotransferase##X71125|QPCT|25797|glutaminyl-peptide cyclotransferase##BC036721|QPCT|25797|glutaminyl-peptide cyclotransferase##BC030706|PRKD3|23683|protein kinase D3##BC012820|PRKD3|23683|protein kinase D3##AB015982|PRKD3|23683|protein kinase D3##NM_005813|PRKD3|23683|protein kinase D3##BX538031|C2orf56|55471|chromosome 2 open reading frame 56##AK302150|C2orf56|55471|chromosome 2 open reading frame 56##AK294240|C2orf56|55471|chromosome 2 open reading frame 56##AK128735|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##BC019270|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AK313483|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AL136842|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##NM_006449|CDC42EP3|10602|CDC42 effector protein (Rho GTPase binding) 3##AY358269|FAM82A1|151393|family with sequence similarity 82, member A1##NM_001170791|FAM82A1|151393|family with sequence similarity 82, member A1##AK095462|FAM82A1|151393|family with sequence similarity 82, member A1	0.0	
chr2	99163604	99163744	reg1035287.p1	3.461	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-102316	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-200769	+	DQ426863 NM_001079878 NM_001298 DQ067460	-201041	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	61268	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	61376	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	61396	+	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)	0.0	
chr3	128328849	128328949	reg1042294.p1	3.461	+	AF008192 NM_007354	-33971	-	BC051342 BC002557 NM_032638 BX647499 TSC_hg19_v1_chr3_-_128212044	-116863	-	TSC_hg19_v1_chr3_-_128207374 AK314826 NM_001145661	-121529	-	BC007995 TSC_hg19_v1_chr3_-_128369648 CR456742 AB527671 CU679817	40687	-	TSC_hg19_v1_chr3_-_128369662 AK297941 AK312369 AK296905 CR749284 BC010839 AK223595	40783	-	TSC_hg19_v1_chr3_-_128369724 NM_002950	40839	-	AF008192|C3orf27|23434|chromosome 3 open reading frame 27##NM_007354|C3orf27|23434|chromosome 3 open reading frame 27##BC051342|GATA2|2624|GATA binding protein 2##BC002557|GATA2|2624|GATA binding protein 2##NM_032638|GATA2|2624|GATA binding protein 2##BX647499|GATA2|2624|GATA binding protein 2##AK314826|GATA2|2624|GATA binding protein 2##NM_001145661|GATA2|2624|GATA binding protein 2##BC007995|RPN1|6184|ribophorin I##CR456742|RPN1|6184|ribophorin I##AK297941|RPN1|6184|ribophorin I##AK312369|RPN1|6184|ribophorin I##AK296905|RPN1|6184|ribophorin I##CR749284|RPN1|6184|ribophorin I##BC010839|RPN1|6184|ribophorin I##AK223595|RPN1|6184|ribophorin I##NM_002950|RPN1|6184|ribophorin I	0.0	
chr3	39302593	39302697	reg1043185.p1	3.461	+	BC127119 BC139782 AY375160 NM_194293 TSC_hg19_v1_chr3_-_39234085 AJ626899 AJ626900 NM_001198621 AK096421 BX648565 CR749430	-68560	-	NM_033027 TSC_hg19_v1_chr3_-_39195146	-107521	-	TSC_hg19_v1_chr3_-_39195053 BC038949 AB053121 BC028213	-107594	-	U28934 BC028078 U20350 AK307911 AK312373 AK225764 BC017855 NM_001337	18857	-	NM_001171172	19284	-	NM_001171171	20118	-	BC127119|XIRP1|165904|xin actin-binding repeat containing 1##BC139782|XIRP1|165904|xin actin-binding repeat containing 1##AY375160|XIRP1|165904|xin actin-binding repeat containing 1##NM_194293|XIRP1|165904|xin actin-binding repeat containing 1##AJ626899|XIRP1|165904|xin actin-binding repeat containing 1##AJ626900|XIRP1|165904|xin actin-binding repeat containing 1##NM_001198621|XIRP1|165904|xin actin-binding repeat containing 1##AK096421|XIRP1|165904|xin actin-binding repeat containing 1##BX648565|XIRP1|165904|xin actin-binding repeat containing 1##CR749430|XIRP1|165904|xin actin-binding repeat containing 1##NM_033027|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC038949|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##AB053121|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##BC028213|CSRNP1|64651|cysteine-serine-rich nuclear protein 1##U28934|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC028078|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##U20350|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK307911|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK312373|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##AK225764|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##BC017855|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001337|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171172|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1##NM_001171171|CX3CR1|1524|chemokine (C-X3-C motif) receptor 1	0.0	
chr5	67511158	67511339	reg1035171.p2	3.461	+	BC109069 BC109070 D83597 NM_005582 AK313177	-1018648	-	AY830839 BC018692 NM_015183	-1386645	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-1619040	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	332	+	TSC_hg19_v1_chr5_+_67511602 BC094795	359	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	73046	+	BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.0	
chr5	97180666	97180752	reg1039285.p1	3.461	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-661722	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-661767	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	-661801	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	924332	+	BC054860 BC117134 NM_001270 AF006513	1081519	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	2690364	+	NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A	0.096212	
chr6	158447627	158447808	reg1019846.p2	3.461	+	NM_001178088 TSC_hg19_v1_chr6_+_158438191 BX648749 AB002346 AF039945	-9545	+	TSC_hg19_v1_chr6_+_158402928 AY152396 AB384465	-44708	+	TSC_hg19_v1_chr6_+_158402923 AF318616	-44798	+	BC048335 BC001705 BC028594 BX648104 TSC_hg19_v1_chr6_-_158589279	141523	-	TSC_hg19_v1_chr6_-_158589295 AK027823 BC060795 NM_032861	141583	-	NM_207118 TSC_hg19_v1_chr6_+_158589381 AK055106 BC056906 AJ634743	141674	+	NM_001178088|SYNJ2|8871|synaptojanin 2##BX648749|SYNJ2|8871|synaptojanin 2##AB002346|SYNJ2|8871|synaptojanin 2##AF039945|SYNJ2|8871|synaptojanin 2##AY152396|SYNJ2|8871|synaptojanin 2##AF318616|SYNJ2|8871|synaptojanin 2##BC048335|SERAC1|84947|serine active site containing 1##BC001705|SERAC1|84947|serine active site containing 1##BC028594|SERAC1|84947|serine active site containing 1##BX648104|SERAC1|84947|serine active site containing 1##AK027823|SERAC1|84947|serine active site containing 1##BC060795|SERAC1|84947|serine active site containing 1##NM_032861|SERAC1|84947|serine active site containing 1##NM_207118|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AK055106|GTF2H5|404672|general transcription factor IIH, polypeptide 5##BC056906|GTF2H5|404672|general transcription factor IIH, polypeptide 5##AJ634743|GTF2H5|404672|general transcription factor IIH, polypeptide 5	0.0	
chr7	55154342	55154474	reg1034573.p1	3.461	+	TSC_hg19_v1_chr7_+_55086922 AY550966 DQ088980 AK290352 GU255993 AB528482 AY698023 AY698024	-67462	+	TSC_hg19_v1_chr7_+_55086710 BC057802 BC094761 HQ912715 NM_005228 NM_201282 NM_201283 NM_201284 AF125253 U48722 X00588 BC070081 AK225422 K03193 AB209442 BC134346	-67663	+	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	-327487	-	AK095857 NM_018697	278732	+	AK313326 BC070049 AK225958 AJ278245 AB035966 AF353942 TSC_hg19_v1_chr7_+_55433704 AK301747 AK307204 AL713665	279164	+	CR533483 AM393121 TSC_hg19_v1_chr7_-_55640050 AL136610	485632	-	AY550966|EGFR|1956|epidermal growth factor receptor##DQ088980|EGFR|1956|epidermal growth factor receptor##AK290352|EGFR|1956|epidermal growth factor receptor##GU255993|EGFR|1956|epidermal growth factor receptor##AY698023|EGFR|1956|epidermal growth factor receptor##AY698024|EGFR|1956|epidermal growth factor receptor##BC094761|EGFR|1956|epidermal growth factor receptor##HQ912715|EGFR|1956|epidermal growth factor receptor##NM_005228|EGFR|1956|epidermal growth factor receptor##NM_201282|EGFR|1956|epidermal growth factor receptor##NM_201283|EGFR|1956|epidermal growth factor receptor##NM_201284|EGFR|1956|epidermal growth factor receptor##AF125253|EGFR|1956|epidermal growth factor receptor##U48722|EGFR|1956|epidermal growth factor receptor##X00588|EGFR|1956|epidermal growth factor receptor##BC070081|EGFR|1956|epidermal growth factor receptor##AK225422|EGFR|1956|epidermal growth factor receptor##K03193|EGFR|1956|epidermal growth factor receptor##AB209442|EGFR|1956|epidermal growth factor receptor##AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit##AK095857|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##NM_018697|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK313326|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##BC070049|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK225958|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AJ278245|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AB035966|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AF353942|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AK301747|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##AL713665|LANCL2|55915|LanC lantibiotic synthetase component C-like 2 (bacterial)##CR533483|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AM393121|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1##AL136610|VOPP1|81552|vesicular, overexpressed in cancer, prosurvival protein 1	0.0	
chr8	134931754	134931905	reg1040144.p1	3.461	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-347732	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-622332	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-728499	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	776965	-	TSC_hg19_v1_chr8_-_135725053 AB463359	793250	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	793445	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr11	46273166	46273285	reg1045277.p1	3.460	+	TSC_hg19_v1_chr11_-_46142986 AK023258 NM_001101802 NM_016621	-130228	-	TSC_hg19_v1_chr11_+_45944226 BC037291	-329009	+	AK055829 AK096021 NM_152312	-330042	+	TSC_hg19_v1_chr11_+_46299212 AK314072 NM_052854	25980	+	BC014097 TSC_hg19_v1_chr11_+_46299557 BC015781 AB063321	26335	+	TSC_hg19_v1_chr11_+_46299596 AB463458 CU680776 DQ895809 EU176365	26398	+	AK023258|PHF21A|51317|PHD finger protein 21A##NM_001101802|PHF21A|51317|PHD finger protein 21A##NM_016621|PHF21A|51317|PHD finger protein 21A##BC037291|GYLTL1B|120071|glycosyltransferase-like 1B##AK055829|GYLTL1B|120071|glycosyltransferase-like 1B##AK096021|GYLTL1B|120071|glycosyltransferase-like 1B##NM_152312|GYLTL1B|120071|glycosyltransferase-like 1B##AK314072|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##NM_052854|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC014097|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##BC015781|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##AB063321|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##DQ895809|CREB3L1|90993|cAMP responsive element binding protein 3-like 1##EU176365|CREB3L1|90993|cAMP responsive element binding protein 3-like 1	0.0	
chr11	46504696	46504835	reg1027805.p1	3.460	+	BC119775 BC119817 AF385590 AF498918 NM_000741 BC095546 BC137535	-96634	-	NM_001012333 TSC_hg19_v1_chr11_+_46403310	-101459	+	TSC_hg19_v1_chr11_+_46403285 X55110	-101478	+	BC045609 NM_017749 AK302808	108177	-	AL834190 TSC_hg19_v1_chr11_-_46615568 AK057896 AK000301 AB051523	110770	-	AK304530 TSC_hg19_v1_chr11_-_46615589	110838	-	BC119775|CHRM4|1132|cholinergic receptor, muscarinic 4##BC119817|CHRM4|1132|cholinergic receptor, muscarinic 4##AF385590|CHRM4|1132|cholinergic receptor, muscarinic 4##AF498918|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_000741|CHRM4|1132|cholinergic receptor, muscarinic 4##BC095546|CHRM4|1132|cholinergic receptor, muscarinic 4##BC137535|CHRM4|1132|cholinergic receptor, muscarinic 4##NM_001012333|MDK|4192|midkine (neurite growth-promoting factor 2)##X55110|MDK|4192|midkine (neurite growth-promoting factor 2)##BC045609|AMBRA1|55626|autophagy/beclin-1 regulator 1##NM_017749|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK302808|AMBRA1|55626|autophagy/beclin-1 regulator 1##AL834190|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK057896|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK000301|AMBRA1|55626|autophagy/beclin-1 regulator 1##AB051523|AMBRA1|55626|autophagy/beclin-1 regulator 1##AK304530|AMBRA1|55626|autophagy/beclin-1 regulator 1	0.0	
chr12	92428712	92428893	reg1027138.p1	3.460	+	NM_001920	-851997	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-852222	-	AK291309 BX571756 TSC_hg19_v1_chr12_-_91573325 NM_133503	-855491	-	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	110841	-	AJ845165 AJ845166 NM_001025233	388932	+	AJ845168 NM_001025232	393121	-	NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AK291309|DCN|1634|decorin##BX571756|DCN|1634|decorin##NM_133503|DCN|1634|decorin##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand	0.0	
chr14	104387556	104387699	reg1023242.p1	3.460	+	BC136527 AJ318887 TSC_hg19_v1_chr14_-_104313913 BC035446 NM_015316	-73775	-	TSC_hg19_v1_chr14_+_104182144 NM_001198953 NM_024071 BC005999 AK057816 BC001130 AY395756 AK290519 BX248261	-205511	+	TSC_hg19_v1_chr14_-_104181759 AK022829 BC011725 BX161398 BC001036 AK023646 NM_001100118 NM_001100119 NM_005432	-205844	-	BX161388 TSC_hg19_v1_chr14_-_104387847 BC047289 BC063419 BC000429 BC001944	218	-	AK310120 TSC_hg19_v1_chr14_-_104387867 AK309355 AK312099 AF054175 AK309499 DQ426862 NM_001127393 NM_004894	252	-	TSC_hg19_v1_chr14_+_104394792 NM_153046	7156	+	BC136527|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##AJ318887|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##BC035446|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##NM_015316|PPP1R13B|23368|protein phosphatase 1, regulatory subunit 13B##NM_001198953|ZFYVE21|79038|zinc finger, FYVE domain containing 21##NM_024071|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BC005999|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK057816|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BC001130|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AY395756|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK290519|ZFYVE21|79038|zinc finger, FYVE domain containing 21##BX248261|ZFYVE21|79038|zinc finger, FYVE domain containing 21##AK022829|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC011725|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BX161398|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BC001036|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##AK023646|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100118|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_001100119|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##NM_005432|XRCC3|7517|X-ray repair complementing defective repair in Chinese hamster cells 3##BX161388|C14orf2|9556|chromosome 14 open reading frame 2##BC047289|C14orf2|9556|chromosome 14 open reading frame 2##BC063419|C14orf2|9556|chromosome 14 open reading frame 2##BC000429|C14orf2|9556|chromosome 14 open reading frame 2##BC001944|C14orf2|9556|chromosome 14 open reading frame 2##AK310120|C14orf2|9556|chromosome 14 open reading frame 2##AK309355|C14orf2|9556|chromosome 14 open reading frame 2##AK312099|C14orf2|9556|chromosome 14 open reading frame 2##AF054175|C14orf2|9556|chromosome 14 open reading frame 2##AK309499|C14orf2|9556|chromosome 14 open reading frame 2##DQ426862|C14orf2|9556|chromosome 14 open reading frame 2##NM_001127393|C14orf2|9556|chromosome 14 open reading frame 2##NM_004894|C14orf2|9556|chromosome 14 open reading frame 2##NM_153046|TDRD9|122402|tudor domain containing 9	0.0	
chr14	50459731	50459867	reg1033568.p1	3.460	+	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-99393	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-99966	+	AK313790 TSC_hg19_v1_chr14_+_50359816 BC008918	-99981	+	AK091232 AX746864 NM_001012706	14438	-	AF390030 NM_001014830	99561	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	123471	-	AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AK313790|ARF6|382|ADP-ribosylation factor 6##BC008918|ARF6|382|ADP-ribosylation factor 6##AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D	0.0	
chr1	59307280	59307413	reg1035672.p2	3.460	+	BC002646 TSC_hg19_v1_chr1_-_59249716 AK307137 BC068522 NM_002228	-57611	-	TSC_hg19_v1_chr1_-_59248287 BC009874	-58981	-	TSC_hg19_v1_chr1_-_59165735 BC167849 CR627323 NM_001085487	-141594	-	TSC_hg19_v1_chr1_+_59762504 NM_001113411 NM_018291 BX647626 AK022237 AK090568 AX746514 AK315649 BC014947	455266	+	NM_001244714 AK054842	468407	+	AK292314 BC011621 NM_015888 AF044923 TSC_hg19_v1_chr1_+_60280620 BC107857 DQ891957 DQ895143 CU679990 AK097735	973306	+	BC002646|JUN|3725|jun proto-oncogene##BC068522|JUN|3725|jun proto-oncogene##NM_002228|JUN|3725|jun proto-oncogene##BC009874|JUN|3725|jun proto-oncogene##BC167849|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##CR627323|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001085487|MYSM1|114803|Myb-like, SWIRM and MPN domains 1##NM_001113411|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_018291|FGGY|55277|FGGY carbohydrate kinase domain containing##BX647626|FGGY|55277|FGGY carbohydrate kinase domain containing##AK022237|FGGY|55277|FGGY carbohydrate kinase domain containing##AK090568|FGGY|55277|FGGY carbohydrate kinase domain containing##AK315649|FGGY|55277|FGGY carbohydrate kinase domain containing##BC014947|FGGY|55277|FGGY carbohydrate kinase domain containing##NM_001244714|FGGY|55277|FGGY carbohydrate kinase domain containing##AK054842|FGGY|55277|FGGY carbohydrate kinase domain containing##AK292314|HOOK1|51361|hook homolog 1 (Drosophila)##BC011621|HOOK1|51361|hook homolog 1 (Drosophila)##NM_015888|HOOK1|51361|hook homolog 1 (Drosophila)##AF044923|HOOK1|51361|hook homolog 1 (Drosophila)##BC107857|HOOK1|51361|hook homolog 1 (Drosophila)##DQ891957|HOOK1|51361|hook homolog 1 (Drosophila)##DQ895143|HOOK1|51361|hook homolog 1 (Drosophila)##AK097735|HOOK1|51361|hook homolog 1 (Drosophila)	0.976838	CTCF.p2:-6:0.977
chr16	86020834	86020915	reg1019988.p1	3.460	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-88088	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-187539	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-187569	+	TSC_hg19_v1_chr16_-_86542463 AK091834	521590	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	523282	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	523366	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.0	
chr17	30851379	30851539	reg1025900.p2	3.460	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-36699	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-36862	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-37388	+	CU688936 AB385376 AB018270 BC146763 NM_015194	352436	-	TSC_hg19_v1_chr17_-_31204141 AK127942	352664	-	TSC_hg19_v1_chr17_-_31204196 BC030602	352754	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.0	
chr17	79518648	79518714	reg1039715.p2	3.460	+	AL834374 TSC_hg19_v1_chr17_-_79514725	-3987	-	NM_001077182 NM_012418 AF030165 BC126295 BC130330 HQ258429	-23195	+	TSC_hg19_v1_chr17_-_79479865 NM_001199954 NM_001614	-38816	-	TSC_hg19_v1_chr17_-_79519415 AK024644 BC008883 DQ989324 NM_025161	718	-	DQ895356 TSC_hg19_v1_chr17_-_79604087 AB040932 AK000664	85342	-	TSC_hg19_v1_chr17_-_79604107 AK294473	85421	-	AL834374|C17orf70|80233|chromosome 17 open reading frame 70##NM_001077182|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##NM_012418|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##AF030165|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC126295|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC130330|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##HQ258429|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##NM_001199954|ACTG1|71|actin, gamma 1##NM_001614|ACTG1|71|actin, gamma 1##AK024644|C17orf70|80233|chromosome 17 open reading frame 70##BC008883|C17orf70|80233|chromosome 17 open reading frame 70##DQ989324|C17orf70|80233|chromosome 17 open reading frame 70##NM_025161|C17orf70|80233|chromosome 17 open reading frame 70##DQ895356|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AB040932|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AK000664|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AK294473|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)	0.0	
chr19	53360971	53361139	reg1030558.p2	3.460	+	TSC_hg19_v1_chr19_-_53360854 AX721127 CR936599 AK292449 CR936695 AK289841 AY442330 AY442331 NM_001008801 NM_199132	-179	-	CR933598 AK304704 BC070146 AK293074 NM_006969	-36153	-	BX640933 AK131231 NM_198457	-71031	-	NM_207333	33543	-	BC105738 TSC_hg19_v1_chr19_-_53400887 AK307375	39846	-	BC105739 BC105740 BC105930 AK316503 AK291990 BC063805 TSC_hg19_v1_chr19_-_53466117 CR749224 NM_001031665 NM_001202456 NM_001202457 NM_001202473	105036	-	CR936599|ZNF468|90333|zinc finger protein 468##AK292449|ZNF468|90333|zinc finger protein 468##CR936695|ZNF468|90333|zinc finger protein 468##AK289841|ZNF468|90333|zinc finger protein 468##AY442330|ZNF468|90333|zinc finger protein 468##AY442331|ZNF468|90333|zinc finger protein 468##NM_001008801|ZNF468|90333|zinc finger protein 468##NM_199132|ZNF468|90333|zinc finger protein 468##CR933598|ZNF28|7576|zinc finger protein 28##AK304704|ZNF28|7576|zinc finger protein 28##BC070146|ZNF28|7576|zinc finger protein 28##AK293074|ZNF28|7576|zinc finger protein 28##NM_006969|ZNF28|7576|zinc finger protein 28##BX640933|ZNF600|162966|zinc finger protein 600##AK131231|ZNF600|162966|zinc finger protein 600##NM_198457|ZNF600|162966|zinc finger protein 600##NM_207333|ZNF320|162967|zinc finger protein 320##BC105738|ZNF320|162967|zinc finger protein 320##BC105739|ZNF816|125893|zinc finger protein 816##BC105740|ZNF816|125893|zinc finger protein 816##BC105930|ZNF816|125893|zinc finger protein 816##AK316503|ZNF816-ZNF321P|100529240|ZNF816-ZNF321P readthrough##AK291990|ZNF816|125893|zinc finger protein 816##BC063805|ZNF816|125893|zinc finger protein 816##CR749224|ZNF816-ZNF321P|100529240|ZNF816-ZNF321P readthrough##NM_001031665|ZNF816|125893|zinc finger protein 816##NM_001202456|ZNF816|125893|zinc finger protein 816##NM_001202457|ZNF816|125893|zinc finger protein 816##NM_001202473|ZNF816-ZNF321P|100529240|ZNF816-ZNF321P readthrough	0.158365	
chr21	43956331	43956512	reg1036177.p2	3.460	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	-22418	+	AJ269529 NM_018964	-36680	+	HQ258144 AK314746 BC101519 BC113367 AK057315 AB041016 NM_080860 AB006536	-40041	-	TSC_hg19_v1_chr21_+_44073730 NM_001001567 NM_001001568 NM_001001569 NM_001001570 NM_001001571 NM_001001572 NM_001001573 NM_001001574 NM_001001575 NM_001001576 NM_001001577 NM_001001578 NM_001001579 NM_001001580 NM_001001581 NM_001001582 NM_001001583 NM_001001584 NM_001001585 NM_002606 AF048837 AY701187 BC009047 AK314679 AY196299 AY196300 AY196301 AY196302 AY196303 AY196304 AY196305 AY196306 AY196307 AY196308 AY196309 AY196310 AY196311 AY196312 AY196313 AY196314 AK001307 AK294112 AF067223 AF067224 AF067225 AF067226 AB527758 AY242121 BT007016 GQ129331 GQ129332	117366	+	AB590172 CU675357 DQ892967 DQ896215 TSC_hg19_v1_chr21_-_44299643 AK292923 AK315008 AJ243912 AJ243913 BC006341	343203	-	TSC_hg19_v1_chr21_-_44299690 BC001074 NM_018669 NM_033661 AK298015	343263	-	BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##HQ258144|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK314746|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC101519|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##BC113367|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AK057315|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB041016|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_080860|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##AB006536|RSPH1|89765|radial spoke head 1 homolog (Chlamydomonas)##NM_001001567|PDE9A|5152|phosphodiesterase 9A##NM_001001568|PDE9A|5152|phosphodiesterase 9A##NM_001001569|PDE9A|5152|phosphodiesterase 9A##NM_001001570|PDE9A|5152|phosphodiesterase 9A##NM_001001571|PDE9A|5152|phosphodiesterase 9A##NM_001001572|PDE9A|5152|phosphodiesterase 9A##NM_001001573|PDE9A|5152|phosphodiesterase 9A##NM_001001574|PDE9A|5152|phosphodiesterase 9A##NM_001001575|PDE9A|5152|phosphodiesterase 9A##NM_001001576|PDE9A|5152|phosphodiesterase 9A##NM_001001577|PDE9A|5152|phosphodiesterase 9A##NM_001001578|PDE9A|5152|phosphodiesterase 9A##NM_001001579|PDE9A|5152|phosphodiesterase 9A##NM_001001580|PDE9A|5152|phosphodiesterase 9A##NM_001001581|PDE9A|5152|phosphodiesterase 9A##NM_001001582|PDE9A|5152|phosphodiesterase 9A##NM_001001583|PDE9A|5152|phosphodiesterase 9A##NM_001001584|PDE9A|5152|phosphodiesterase 9A##NM_001001585|PDE9A|5152|phosphodiesterase 9A##NM_002606|PDE9A|5152|phosphodiesterase 9A##AF048837|PDE9A|5152|phosphodiesterase 9A##AY701187|PDE9A|5152|phosphodiesterase 9A##BC009047|PDE9A|5152|phosphodiesterase 9A##AK314679|PDE9A|5152|phosphodiesterase 9A##AY196299|PDE9A|5152|phosphodiesterase 9A##AY196300|PDE9A|5152|phosphodiesterase 9A##AY196301|PDE9A|5152|phosphodiesterase 9A##AY196302|PDE9A|5152|phosphodiesterase 9A##AY196303|PDE9A|5152|phosphodiesterase 9A##AY196304|PDE9A|5152|phosphodiesterase 9A##AY196305|PDE9A|5152|phosphodiesterase 9A##AY196306|PDE9A|5152|phosphodiesterase 9A##AY196307|PDE9A|5152|phosphodiesterase 9A##AY196308|PDE9A|5152|phosphodiesterase 9A##AY196309|PDE9A|5152|phosphodiesterase 9A##AY196310|PDE9A|5152|phosphodiesterase 9A##AY196311|PDE9A|5152|phosphodiesterase 9A##AY196312|PDE9A|5152|phosphodiesterase 9A##AY196313|PDE9A|5152|phosphodiesterase 9A##AY196314|PDE9A|5152|phosphodiesterase 9A##AK001307|PDE9A|5152|phosphodiesterase 9A##AK294112|PDE9A|5152|phosphodiesterase 9A##AF067223|PDE9A|5152|phosphodiesterase 9A##AF067224|PDE9A|5152|phosphodiesterase 9A##AF067225|PDE9A|5152|phosphodiesterase 9A##AF067226|PDE9A|5152|phosphodiesterase 9A##AY242121|PDE9A|5152|phosphodiesterase 9A##BT007016|PDE9A|5152|phosphodiesterase 9A##GQ129331|PDE9A|5152|phosphodiesterase 9A##GQ129332|PDE9A|5152|phosphodiesterase 9A##DQ892967|WDR4|10785|WD repeat domain 4##DQ896215|WDR4|10785|WD repeat domain 4##AK292923|WDR4|10785|WD repeat domain 4##AK315008|WDR4|10785|WD repeat domain 4##AJ243912|WDR4|10785|WD repeat domain 4##AJ243913|WDR4|10785|WD repeat domain 4##BC006341|WDR4|10785|WD repeat domain 4##BC001074|WDR4|10785|WD repeat domain 4##NM_018669|WDR4|10785|WD repeat domain 4##NM_033661|WDR4|10785|WD repeat domain 4##AK298015|WDR4|10785|WD repeat domain 4	0.0	
chr2	24587808	24587901	reg1039394.p1	3.460	+	TSC_hg19_v1_chr2_-_24583385 AB033082 BC146779 AF182198 AF182199 BC038963 NM_006277 NM_019595 NM_147152	-4374	-	BC050462 NM_001040710	-189883	+	TSC_hg19_v1_chr2_+_24346339 NM_001145710	-241495	+	NM_003743 NM_147223 NM_147233 AJ000881 AJ000882 U59302	219523	+	TSC_hg19_v1_chr2_-_25016225 CU687260 BC073803 NM_001013663	428384	-	NM_001199803 AK027859 TSC_hg19_v1_chr2_+_25016332 NM_024322 BC002870 AK315483	428417	+	AB033082|ITSN2|50618|intersectin 2##BC146779|ITSN2|50618|intersectin 2##AF182198|ITSN2|50618|intersectin 2##AF182199|ITSN2|50618|intersectin 2##BC038963|ITSN2|50618|intersectin 2##NM_006277|ITSN2|50618|intersectin 2##NM_019595|ITSN2|50618|intersectin 2##NM_147152|ITSN2|50618|intersectin 2##BC050462|C2orf84|653140|chromosome 2 open reading frame 84##NM_001040710|C2orf84|653140|chromosome 2 open reading frame 84##NM_001145710|LOC375190|375190|UPF0638 protein B##NM_003743|NCOA1|8648|nuclear receptor coactivator 1##NM_147223|NCOA1|8648|nuclear receptor coactivator 1##NM_147233|NCOA1|8648|nuclear receptor coactivator 1##AJ000881|NCOA1|8648|nuclear receptor coactivator 1##AJ000882|NCOA1|8648|nuclear receptor coactivator 1##U59302|NCOA1|8648|nuclear receptor coactivator 1##BC073803|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001013663|PTRHD1|391356|peptidyl-tRNA hydrolase domain containing 1##NM_001199803|CENPO|79172|centromere protein O##AK027859|CENPO|79172|centromere protein O##NM_024322|CENPO|79172|centromere protein O##BC002870|CENPO|79172|centromere protein O##AK315483|CENPO|79172|centromere protein O	0.0	
chr5	131815265	131815446	reg1031199.p6	3.460	+	TSC_hg19_v1_chr5_+_131746621 AK096941 AK309191 AK128882	-68727	+	TSC_hg19_v1_chr5_+_131705407 NM_003060 AF057164 BC012325 AB015050 AK313230 CU680286 DQ893671 DQ895818 AB291606	-109847	+	BX538252 TSC_hg19_v1_chr5_-_131705330	-110056	-	X14454 BC009483 AK298770 AK314025 NM_002198 TSC_hg19_v1_chr5_-_131826466	11126	-	AB591005 BC066279 BC066280 BC066281 BC066282 BC069137 NM_000879 X04688 X12705	63837	-	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	77285	+	AK096941|C5orf56|441108|chromosome 5 open reading frame 56##AK309191|C5orf56|441108|chromosome 5 open reading frame 56##AK128882|C5orf56|441108|chromosome 5 open reading frame 56##NM_003060|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AF057164|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BC012325|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB015050|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AK313230|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ893671|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##DQ895818|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##AB291606|SLC22A5|6584|solute carrier family 22 (organic cation/carnitine transporter), member 5##BX538252|LOC553103|553103|uncharacterized LOC553103##X14454|IRF1|3659|interferon regulatory factor 1##BC009483|IRF1|3659|interferon regulatory factor 1##AK298770|IRF1|3659|interferon regulatory factor 1##AK314025|IRF1|3659|interferon regulatory factor 1##NM_002198|IRF1|3659|interferon regulatory factor 1##BC066279|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066280|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066281|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC066282|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##BC069137|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_000879|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X04688|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##X12705|IL5|3567|interleukin 5 (colony-stimulating factor, eosinophil)##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)	0.0	
chr6	122793007	122793146	reg1037320.p2	3.460	+	NM_181794 CR749456 AJ420562	-5	+	CU688532 CU689596 AL137261 TSC_hg19_v1_chr6_-_122792947 AF164794 AB033079 BC014412 BC028607 BC033029 NM_020755 AK075339 AY358429 AK128781 AF087902	-123	-	TSC_hg19_v1_chr6_+_122720796 AK225593 AK225594 BC112323 M65217 AK294624 BC005329 BC064622 BC121050 BC121051 BC128420 AK316377 AB463722 CU675115 EU446897	-72260	+	NM_032471 NM_181795	138300	+	BC093027 TSC_hg19_v1_chr6_+_122931549 BC036011 AF087873 AK315151	138504	+	NM_001446 TSC_hg19_v1_chr6_+_123100743 BC012299	307623	+	NM_181794|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AJ420562|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AL137261|SERINC1|57515|serine incorporator 1##AF164794|SERINC1|57515|serine incorporator 1##AB033079|SERINC1|57515|serine incorporator 1##BC014412|SERINC1|57515|serine incorporator 1##BC028607|SERINC1|57515|serine incorporator 1##BC033029|SERINC1|57515|serine incorporator 1##NM_020755|SERINC1|57515|serine incorporator 1##AK075339|SERINC1|57515|serine incorporator 1##AY358429|SERINC1|57515|serine incorporator 1##AF087902|SERINC1|57515|serine incorporator 1##AK225593|HSF2|3298|heat shock transcription factor 2##AK225594|HSF2|3298|heat shock transcription factor 2##BC112323|HSF2|3298|heat shock transcription factor 2##M65217|HSF2|3298|heat shock transcription factor 2##AK294624|HSF2|3298|heat shock transcription factor 2##BC005329|HSF2|3298|heat shock transcription factor 2##BC064622|HSF2|3298|heat shock transcription factor 2##BC121050|HSF2|3298|heat shock transcription factor 2##BC121051|HSF2|3298|heat shock transcription factor 2##BC128420|HSF2|3298|heat shock transcription factor 2##AK316377|HSF2|3298|heat shock transcription factor 2##EU446897|HSF2|3298|heat shock transcription factor 2##NM_032471|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_181795|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##BC093027|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##BC036011|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AF087873|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##AK315151|PKIB|5570|protein kinase (cAMP-dependent, catalytic) inhibitor beta##NM_001446|FABP7|2173|fatty acid binding protein 7, brain##BC012299|FABP7|2173|fatty acid binding protein 7, brain	0.0	
chr6	52926386	52926517	reg1016763.p1	3.460	+	AK315369 TSC_hg19_v1_chr6_-_52860078 AF020918 AF025887 BC096817 NM_001512	-66324	-	AF020919 BC020619 NM_000847	-151974	-	NM_153699	-215559	-	AB023153 BC152464 TSC_hg19_v1_chr6_-_52926579 AF152469 AK074892	81	-	TSC_hg19_v1_chr6_-_52926623 NM_014920 NM_016513	184	-	BC000650 NM_033481	3344	+	AK315369|GSTA4|2941|glutathione S-transferase alpha 4##AF020918|GSTA4|2941|glutathione S-transferase alpha 4##AF025887|GSTA4|2941|glutathione S-transferase alpha 4##BC096817|GSTA4|2941|glutathione S-transferase alpha 4##NM_001512|GSTA4|2941|glutathione S-transferase alpha 4##AF020919|GSTA3|2940|glutathione S-transferase alpha 3##BC020619|GSTA3|2940|glutathione S-transferase alpha 3##NM_000847|GSTA3|2940|glutathione S-transferase alpha 3##NM_153699|GSTA5|221357|glutathione S-transferase alpha 5##AB023153|ICK|22858|intestinal cell (MAK-like) kinase##BC152464|ICK|22858|intestinal cell (MAK-like) kinase##AF152469|ICK|22858|intestinal cell (MAK-like) kinase##AK074892|ICK|22858|intestinal cell (MAK-like) kinase##NM_014920|ICK|22858|intestinal cell (MAK-like) kinase##NM_016513|ICK|22858|intestinal cell (MAK-like) kinase##BC000650|FBXO9|26268|F-box protein 9##NM_033481|FBXO9|26268|F-box protein 9	0.0	
chr7	102734723	102734806	reg1038405.p1	3.460	+	TSC_hg19_v1_chr7_+_102715617 AF275808	-19047	+	TSC_hg19_v1_chr7_+_102715605 AK075500 AK301565 AK225082 AK291818 BC003586	-19170	+	TSC_hg19_v1_chr7_+_102715335 AY150851 AY150852 AY150853 AY150854 NM_001161009 NM_001161010 NM_001161011 NM_001161012 NM_001161013 NM_031905	-19448	+	AY357337 TSC_hg19_v1_chr7_-_102789708 CR936639 NM_001122838 NM_198990	54803	-	AL834175 BC150309 TSC_hg19_v1_chr7_-_102920725 AK302046 BC068601 BC033022 AK131353	185944	-	AK097711 BC094802 BC023575 TSC_hg19_v1_chr7_-_102920949	186137	-	AF275808|ARMC10|83787|armadillo repeat containing 10##AK075500|ARMC10|83787|armadillo repeat containing 10##AK301565|ARMC10|83787|armadillo repeat containing 10##AK225082|ARMC10|83787|armadillo repeat containing 10##AK291818|ARMC10|83787|armadillo repeat containing 10##BC003586|ARMC10|83787|armadillo repeat containing 10##AY150851|ARMC10|83787|armadillo repeat containing 10##AY150852|ARMC10|83787|armadillo repeat containing 10##AY150853|ARMC10|83787|armadillo repeat containing 10##AY150854|ARMC10|83787|armadillo repeat containing 10##NM_001161009|ARMC10|83787|armadillo repeat containing 10##NM_001161010|ARMC10|83787|armadillo repeat containing 10##NM_001161011|ARMC10|83787|armadillo repeat containing 10##NM_001161012|ARMC10|83787|armadillo repeat containing 10##NM_001161013|ARMC10|83787|armadillo repeat containing 10##NM_031905|ARMC10|83787|armadillo repeat containing 10##AY357337|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D##CR936639|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D##NM_001122838|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D##NM_198990|NAPEPLD|222236|N-acyl phosphatidylethanolamine phospholipase D##AL834175|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC150309|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##AK302046|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC068601|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC033022|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##AK131353|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##AK097711|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC094802|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)##BC023575|DPY19L2P2|349152|dpy-19-like 2 pseudogene 2 (C. elegans)	0.45347	CTCF.p2:0:0.453
chr8	11362886	11362957	reg1030264.p2	3.460	+	S76617 NM_001715 BC018703 BC004473 BC038555	-11328	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-38692	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-157917	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	198799	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	264347	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	297263	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.0	
chr9	115611511	115611620	reg1039999.p1	3.460	+	TSC_hg19_v1_chr9_+_115513056 NM_001012994	-98474	+	TSC_hg19_v1_chr9_-_115480398 BC065210 AK310007 BC014881 NM_021218 AK000637	-131177	-	AF161411 TSC_hg19_v1_chr9_-_115480339 AF161409	-131227	-	TSC_hg19_v1_chr9_+_115631819 AK129991	20300	+	CU690566 BC048285 AK314414 AK055571 AF242557 NM_033051	41511	-	AK095843 NM_001101338	162906	-	NM_001012994|SNX30|401548|sorting nexin family member 30##BC065210|C9orf80|58493|chromosome 9 open reading frame 80##AK310007|C9orf80|58493|chromosome 9 open reading frame 80##BC014881|C9orf80|58493|chromosome 9 open reading frame 80##NM_021218|C9orf80|58493|chromosome 9 open reading frame 80##AK000637|C9orf80|58493|chromosome 9 open reading frame 80##AF161411|C9orf80|58493|chromosome 9 open reading frame 80##AF161409|C9orf80|58493|chromosome 9 open reading frame 80##AK129991|SNX30|401548|sorting nexin family member 30##BC048285|SLC46A2|57864|solute carrier family 46, member 2##AK314414|SLC46A2|57864|solute carrier family 46, member 2##AK055571|SLC46A2|57864|solute carrier family 46, member 2##AF242557|SLC46A2|57864|solute carrier family 46, member 2##NM_033051|SLC46A2|57864|solute carrier family 46, member 2##AK095843|ZNF883|169834|zinc finger protein 883##NM_001101338|ZNF883|169834|zinc finger protein 883	0.0	
chr11	1938551	1938618	reg1043157.p2	3.459	+	NM_001013254 NM_001013255	-46459	+	NM_001013253	-48682	+	AK092071 AX747343 NM_001242932	-52190	+	NM_001042780 NM_001042781 NM_001042782 NM_006757 BC062430 TSC_hg19_v1_chr11_+_1940935 BX640689 BC050446 AK056968	2303	+	TSC_hg19_v1_chr11_+_1968573 NM_021134 U26596 Z49254 AK313805 AK128774	29957	+	BC027710 TSC_hg19_v1_chr11_+_1968589	30005	+	NM_001013254|LSP1|4046|lymphocyte-specific protein 1##NM_001013255|LSP1|4046|lymphocyte-specific protein 1##NM_001013253|LSP1|4046|lymphocyte-specific protein 1##AK092071|LSP1|4046|lymphocyte-specific protein 1##NM_001242932|LSP1|4046|lymphocyte-specific protein 1##NM_001042780|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042781|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042782|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_006757|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC062430|TNNT3|7140|troponin T type 3 (skeletal, fast)##BX640689|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC050446|TNNT3|7140|troponin T type 3 (skeletal, fast)##AK056968|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_021134|MRPL23|6150|mitochondrial ribosomal protein L23##U26596|MRPL23|6150|mitochondrial ribosomal protein L23##Z49254|MRPL23|6150|mitochondrial ribosomal protein L23##AK313805|MRPL23|6150|mitochondrial ribosomal protein L23##AK128774|MRPL23|6150|mitochondrial ribosomal protein L23##BC027710|MRPL23|6150|mitochondrial ribosomal protein L23	0.684391	CTCF.p2:-34:0.684
chr12	68569290	68569471	reg1032613.p1	3.459	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	-15958	-	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	-526757	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-905950	+	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	50172	-	CU686738 AB590805 BC066264 BC066263 BC066265 BC066266 BC067510 BC069308 BC067509 NM_020525 AF279437 AY358890 BC070261 AJ277247 BC069112	77924	-	TSC_hg19_v1_chr12_-_68726142 BC010622 AK297311 BC034945 BC022042 AF267851 BC028355 AK314461 NM_001205028 NM_001205029 NM_017440 NM_020128	156726	-	X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26##BC066264|IL22|50616|interleukin 22##BC066263|IL22|50616|interleukin 22##BC066265|IL22|50616|interleukin 22##BC066266|IL22|50616|interleukin 22##BC067510|IL22|50616|interleukin 22##BC069308|IL22|50616|interleukin 22##BC067509|IL22|50616|interleukin 22##NM_020525|IL22|50616|interleukin 22##AF279437|IL22|50616|interleukin 22##AY358890|IL22|50616|interleukin 22##BC070261|IL22|50616|interleukin 22##AJ277247|IL22|50616|interleukin 22##BC069112|IL22|50616|interleukin 22##BC010622|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK297311|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC034945|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC022042|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AF267851|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##BC028355|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##AK314461|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205028|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_001205029|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_017440|MDM1|56890|Mdm1 nuclear protein homolog (mouse)##NM_020128|MDM1|56890|Mdm1 nuclear protein homolog (mouse)	0.0	
chr13	111297567	111297648	reg1017343.p2	3.459	+	TSC_hg19_v1_chr13_-_111268694 AK095260	-28909	-	TSC_hg19_v1_chr13_+_111267898 AK093771 AK298917 AX748297 AK302117 AK057767 AK296758 NM_001242881 NM_018210 AK296227 AK024260 BC041028 AK001631 AK225129	-29565	+	TSC_hg19_v1_chr13_+_111267870 NM_001242882 NM_001242883	-29777	+	TSC_hg19_v1_chr13_-_111358444 AB062436	60831	-	TSC_hg19_v1_chr13_-_111358447 BC007220	60841	-	TSC_hg19_v1_chr13_-_111358460 AK022180 NM_024537	60860	-	AK093771|CARKD|55739|carbohydrate kinase domain containing##AK298917|CARKD|55739|carbohydrate kinase domain containing##AK302117|CARKD|55739|carbohydrate kinase domain containing##AK057767|CARKD|55739|carbohydrate kinase domain containing##AK296758|CARKD|55739|carbohydrate kinase domain containing##NM_001242881|CARKD|55739|carbohydrate kinase domain containing##NM_018210|CARKD|55739|carbohydrate kinase domain containing##AK296227|CARKD|55739|carbohydrate kinase domain containing##AK024260|CARKD|55739|carbohydrate kinase domain containing##BC041028|CARKD|55739|carbohydrate kinase domain containing##AK001631|CARKD|55739|carbohydrate kinase domain containing##AK225129|CARKD|55739|carbohydrate kinase domain containing##NM_001242882|CARKD|55739|carbohydrate kinase domain containing##NM_001242883|CARKD|55739|carbohydrate kinase domain containing##AB062436|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##BC007220|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##AK022180|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##NM_024537|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)	0.351341	CTCF.p2:1:0.351
chr15	50737012	50737129	reg1026875.p2	3.459	+	TSC_hg19_v1_chr15_+_50716601 AK292400 BX537420 NM_001128610 NM_001128611 NM_005154 AK296480 BC038801 D29956 BC015545 BC110590 BC092443 BC026954 BC051345	-20449	+	TSC_hg19_v1_chr15_+_50647681 BX537481	-89399	+	NM_002041 NM_005254 NM_016654 NM_016655 NM_181427	-89466	-	NM_203494	101831	-	TSC_hg19_v1_chr15_-_50978746 BC128987 BC128988	241696	-	TSC_hg19_v1_chr15_-_50978923 AK000124	241869	-	AK292400|USP8|9101|ubiquitin specific peptidase 8##BX537420|USP8|9101|ubiquitin specific peptidase 8##NM_001128610|USP8|9101|ubiquitin specific peptidase 8##NM_001128611|USP8|9101|ubiquitin specific peptidase 8##NM_005154|USP8|9101|ubiquitin specific peptidase 8##AK296480|USP8|9101|ubiquitin specific peptidase 8##BC038801|USP8|9101|ubiquitin specific peptidase 8##D29956|USP8|9101|ubiquitin specific peptidase 8##BC015545|USP8|9101|ubiquitin specific peptidase 8##BC110590|USP8|9101|ubiquitin specific peptidase 8##BC092443|USP8|9101|ubiquitin specific peptidase 8##BC026954|USP8|9101|ubiquitin specific peptidase 8##BC051345|USP8|9101|ubiquitin specific peptidase 8##BX537481|LOC100129387|100129387|uncharacterized LOC100129387##NM_002041|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##NM_005254|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##NM_016654|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##NM_016655|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##NM_181427|GABPB1|2553|GA binding protein transcription factor, beta subunit 1##NM_203494|USP50|373509|ubiquitin specific peptidase 50##BC128987|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7##BC128988|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7##AK000124|TRPM7|54822|transient receptor potential cation channel, subfamily M, member 7	0.0	
chr15	71395588	71395670	reg1043874.p2	3.459	+	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	-210654	+	CU693296 DQ890927 DQ894089 EU176528 AL360202 TSC_hg19_v1_chr15_-_71184737 BC027857 BC072414 AK313472 NM_020147	-210938	-	CU675231 BC006082 BC009446 BC014018 AL833876 BC039153 TSC_hg19_v1_chr15_-_71146496 AK130092 AF443828 AF443829 AK002058 NM_018357 NM_197958	-249161	-	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	12242	-	NM_024817 BC140868	38181	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	443951	+	BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49##DQ890927|THAP10|56906|THAP domain containing 10##DQ894089|THAP10|56906|THAP domain containing 10##EU176528|THAP10|56906|THAP domain containing 10##AL360202|THAP10|56906|THAP domain containing 10##BC027857|THAP10|56906|THAP domain containing 10##BC072414|THAP10|56906|THAP domain containing 10##AK313472|THAP10|56906|THAP domain containing 10##NM_020147|THAP10|56906|THAP domain containing 10##BC006082|LARP6|55323|La ribonucleoprotein domain family, member 6##BC009446|LARP6|55323|La ribonucleoprotein domain family, member 6##BC014018|LARP6|55323|La ribonucleoprotein domain family, member 6##AL833876|LARP6|55323|La ribonucleoprotein domain family, member 6##BC039153|LARP6|55323|La ribonucleoprotein domain family, member 6##AK130092|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443828|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443829|LARP6|55323|La ribonucleoprotein domain family, member 6##AK002058|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_018357|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_197958|LARP6|55323|La ribonucleoprotein domain family, member 6##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4	0.972757	CTCF.p2:-1:0.973
chr16	49524034	49524138	reg1040667.p2	3.459	+	BC021181 BC021718 NM_144602 CU676858	-116258	+	M58583 TSC_hg19_v1_chr16_-_49315772 AK314276 NM_004352	-208352	-	BC093692 BC093718 TSC_hg19_v1_chr16_-_49315528	-208586	-	NM_015069	336831	-	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	535054	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	575807	+	BC021181|C16orf78|123970|chromosome 16 open reading frame 78##BC021718|C16orf78|123970|chromosome 16 open reading frame 78##NM_144602|C16orf78|123970|chromosome 16 open reading frame 78##M58583|CBLN1|869|cerebellin 1 precursor##AK314276|CBLN1|869|cerebellin 1 precursor##NM_004352|CBLN1|869|cerebellin 1 precursor##BC093692|CBLN1|869|cerebellin 1 precursor##BC093718|CBLN1|869|cerebellin 1 precursor##NM_015069|ZNF423|23090|zinc finger protein 423##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3	0.477381	CTCF.p2:9:0.477
chr17	16118904	16118995	reg1037804.p2	3.459	+	BC056862 BC035748 BC142648 BC026028 AK307614 TSC_hg19_v1_chr17_-_16118849 AF044209 BC050594 BC068996 BC058511 BC107772 NM_006311	-109	-	AB385422 AB028970 BC167431 NM_001190438 NM_001190440 AF087856 AF303586	-21031	-	TSC_hg19_v1_chr17_-_15973765 AL137641	-145163	-	TSC_hg19_v1_chr17_+_16120523 NM_004278 AK292932 AK302523 AK296120 BC068197 AB017165 CU686621	1557	+	TSC_hg19_v1_chr17_-_16256747 AF514992 NM_181716 BC052604	137813	-	TSC_hg19_v1_chr17_-_16256824 BC137486 BC137487	137884	-	BC056862|NCOR1|9611|nuclear receptor corepressor 1##BC035748|NCOR1|9611|nuclear receptor corepressor 1##BC142648|NCOR1|9611|nuclear receptor corepressor 1##BC026028|NCOR1|9611|nuclear receptor corepressor 1##AK307614|NCOR1|9611|nuclear receptor corepressor 1##AF044209|NCOR1|9611|nuclear receptor corepressor 1##BC050594|NCOR1|9611|nuclear receptor corepressor 1##BC068996|NCOR1|9611|nuclear receptor corepressor 1##BC058511|NCOR1|9611|nuclear receptor corepressor 1##BC107772|NCOR1|9611|nuclear receptor corepressor 1##NM_006311|NCOR1|9611|nuclear receptor corepressor 1##AB028970|NCOR1|9611|nuclear receptor corepressor 1##BC167431|NCOR1|9611|nuclear receptor corepressor 1##NM_001190438|NCOR1|9611|nuclear receptor corepressor 1##NM_001190440|NCOR1|9611|nuclear receptor corepressor 1##AF087856|NCOR1|9611|nuclear receptor corepressor 1##AF303586|NCOR1|9611|nuclear receptor corepressor 1##AL137641|NCOR1|9611|nuclear receptor corepressor 1##NM_004278|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK292932|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK302523|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AK296120|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##BC068197|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AB017165|PIGL|9487|phosphatidylinositol glycan anchor biosynthesis, class L##AF514992|CENPV|201161|centromere protein V##NM_181716|CENPV|201161|centromere protein V##BC052604|CENPV|201161|centromere protein V##BC137486|CENPV|201161|centromere protein V##BC137487|CENPV|201161|centromere protein V	0.197772	
chr17	26271933	26272056	reg1044308.p1	3.459	+	TSC_hg19_v1_chr17_-_26220392 AK055808 AK310926 NM_001076680	-51603	-	BC130283 BC144126 U05810 L09210 X73029 AF068236 AK304252 NM_000625 TSC_hg19_v1_chr17_-_26127556	-144479	-	U31511 TSC_hg19_v1_chr17_-_26127402	-144596	-	TSC_hg19_v1_chr17_+_26369661 AK315315 AF197898 NM_016231 AF180819	97659	+	AB384832 AK024686 TSC_hg19_v1_chr17_+_26370066	98007	+	NM_014573 TSC_hg19_v1_chr17_+_26646214 L19183 AK299511 AK307678 BC017362 BC091504 AK293331	374199	+	AK055808|C17orf108|201229|chromosome 17 open reading frame 108##NM_001076680|C17orf108|201229|chromosome 17 open reading frame 108##BC130283|NOS2|4843|nitric oxide synthase 2, inducible##BC144126|NOS2|4843|nitric oxide synthase 2, inducible##U05810|NOS2|4843|nitric oxide synthase 2, inducible##L09210|NOS2|4843|nitric oxide synthase 2, inducible##X73029|NOS2|4843|nitric oxide synthase 2, inducible##AF068236|NOS2|4843|nitric oxide synthase 2, inducible##AK304252|NOS2|4843|nitric oxide synthase 2, inducible##NM_000625|NOS2|4843|nitric oxide synthase 2, inducible##U31511|NOS2|4843|nitric oxide synthase 2, inducible##AK315315|NLK|51701|nemo-like kinase##AF197898|NLK|51701|nemo-like kinase##NM_016231|NLK|51701|nemo-like kinase##AF180819|NLK|51701|nemo-like kinase##AK024686|NLK|51701|nemo-like kinase##NM_014573|TMEM97|27346|transmembrane protein 97##L19183|TMEM97|27346|transmembrane protein 97##AK299511|TMEM97|27346|transmembrane protein 97##AK307678|TMEM97|27346|transmembrane protein 97##BC017362|TMEM97|27346|transmembrane protein 97##BC091504|TMEM97|27346|transmembrane protein 97##AK293331|TMEM97|27346|transmembrane protein 97	0.0	
chr19	19496439	19496576	reg1019912.p2	3.459	+	TSC_hg19_v1_chr19_+_19431662 AB385396	-64843	+	TSC_hg19_v1_chr19_+_19431637 NM_015329 AB020699	-64873	+	AK096152 AK292085 AK294618 AK301119 BC119728 BC119729 BC142988 TSC_hg19_v1_chr19_-_19431319 NM_172231	-65156	-	TSC_hg19_v1_chr19_+_19496634 NM_017660 AK303482	199	+	AB464723 DQ891603 DQ894797 AF329483 AK058166 AK313767 BC014611 NM_032037 AF348077	129858	-	TSC_hg19_v1_chr19_+_19626536 AF261134	130058	+	NM_015329|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AB020699|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AK096152|SUGP1|57794|SURP and G patch domain containing 1##AK292085|SUGP1|57794|SURP and G patch domain containing 1##AK294618|SUGP1|57794|SURP and G patch domain containing 1##AK301119|SUGP1|57794|SURP and G patch domain containing 1##BC119728|SUGP1|57794|SURP and G patch domain containing 1##BC119729|SUGP1|57794|SURP and G patch domain containing 1##BC142988|SUGP1|57794|SURP and G patch domain containing 1##NM_172231|SUGP1|57794|SURP and G patch domain containing 1##NM_017660|GATAD2A|54815|GATA zinc finger domain containing 2A##AK303482|GATAD2A|54815|GATA zinc finger domain containing 2A##DQ891603|TSSK6|83983|testis-specific serine kinase 6##DQ894797|TSSK6|83983|testis-specific serine kinase 6##AF329483|TSSK6|83983|testis-specific serine kinase 6##AK058166|TSSK6|83983|testis-specific serine kinase 6##AK313767|TSSK6|83983|testis-specific serine kinase 6##BC014611|TSSK6|83983|testis-specific serine kinase 6##NM_032037|TSSK6|83983|testis-specific serine kinase 6##AF348077|TSSK6|83983|testis-specific serine kinase 6##AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	0.0	
chr19	19600046	19600131	reg1040139.p1	3.459	+	TSC_hg19_v1_chr19_+_19496634 NM_017660 AK303482	-103382	+	TSC_hg19_v1_chr19_+_19431662 AB385396	-168424	+	TSC_hg19_v1_chr19_+_19431637 NM_015329 AB020699	-168454	+	AB464723 DQ891603 DQ894797 AF329483 AK058166 AK313767 BC014611 NM_032037 AF348077	26277	-	TSC_hg19_v1_chr19_+_19626536 AF261134	26477	+	NM_015965 TSC_hg19_v1_chr19_+_19627033 BC009189 AK298891 AK293859 AK293965 BC000589 AF286697	26948	+	NM_017660|GATAD2A|54815|GATA zinc finger domain containing 2A##AK303482|GATAD2A|54815|GATA zinc finger domain containing 2A##NM_015329|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##AB020699|MAU2|23383|MAU2 chromatid cohesion factor homolog (C. elegans)##DQ891603|TSSK6|83983|testis-specific serine kinase 6##DQ894797|TSSK6|83983|testis-specific serine kinase 6##AF329483|TSSK6|83983|testis-specific serine kinase 6##AK058166|TSSK6|83983|testis-specific serine kinase 6##AK313767|TSSK6|83983|testis-specific serine kinase 6##BC014611|TSSK6|83983|testis-specific serine kinase 6##NM_032037|TSSK6|83983|testis-specific serine kinase 6##AF348077|TSSK6|83983|testis-specific serine kinase 6##AF261134|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##NM_015965|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC009189|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AK293859|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##BC000589|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13##AF286697|NDUFA13|51079|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	0.0	
chr19	7273312	7273427	reg1033363.p2	3.459	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-173818	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-203654	+	AK315405 NM_001044387 NM_001044388 NM_024341	-203907	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	20591	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	186638	+	TSC_hg19_v1_chr19_+_7460061 AB011093	186708	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr2	127802020	127802161	reg1040611.p2	3.459	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-388298	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-388383	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-3019226	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	62651	-	BC039307 NM_001001665	161252	-	AK131190 TSC_hg19_v1_chr2_-_127977781	175627	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.0	
chr2	136889768	136889860	reg1038264.p1	3.459	+	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	-14138	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	-16016	-	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-146598	-	TSC_hg19_v1_chr2_+_137523114 AK299929	633302	+	NM_001080427	858647	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	1832120	+	AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001080427|THSD7B|80731|thrombospondin, type I, domain containing 7B##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase	0.0	
chr2	223180112	223180274	reg1021425.p1	3.459	+	CU687758 EU446645 AY251279 AY251280 S69369 S69370 BC008826 BC063547 BC101299 BC101300 BC101301 BC101302 BC114363 TSC_hg19_v1_chr2_-_223163712 AK291278 NM_000438 NM_001127366 NM_013942 NM_181457 NM_181458 NM_181459 NM_181460 NM_181461	-16668	-	AK057009 NM_153038 BC109388	-17281	+	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	-21173	-	TSC_hg19_v1_chr2_+_223289261 AK314322	109047	+	TSC_hg19_v1_chr2_+_223289285 AF542512 BC134342 NM_152386 BC106905 BC114513 BC106904	109114	+	TSC_hg19_v1_chr2_-_223520807 AK294158 BC006502 AF042346 CU676064 BC011261 AK001025 BC008434 BC017783 D84430 AK316497 AK291531 AF161521 BC022273 NM_005687	340601	-	EU446645|PAX3|5077|paired box 3##AY251279|PAX3|5077|paired box 3##AY251280|PAX3|5077|paired box 3##S69369|PAX3|5077|paired box 3##S69370|PAX3|5077|paired box 3##BC063547|PAX3|5077|paired box 3##BC101299|PAX3|5077|paired box 3##BC101300|PAX3|5077|paired box 3##BC101301|PAX3|5077|paired box 3##BC101302|PAX3|5077|paired box 3##BC114363|PAX3|5077|paired box 3##AK291278|PAX3|5077|paired box 3##NM_000438|PAX3|5077|paired box 3##NM_001127366|PAX3|5077|paired box 3##NM_013942|PAX3|5077|paired box 3##NM_181457|PAX3|5077|paired box 3##NM_181458|PAX3|5077|paired box 3##NM_181459|PAX3|5077|paired box 3##NM_181460|PAX3|5077|paired box 3##NM_181461|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK314322|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AF542512|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC134342|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##NM_152386|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106905|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC114513|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##BC106904|SGPP2|130367|sphingosine-1-phosphate phosphatase 2##AK294158|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC006502|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF042346|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC011261|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK001025|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC008434|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC017783|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##D84430|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK316497|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AK291531|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##AF161521|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##BC022273|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit##NM_005687|FARSB|10056|phenylalanyl-tRNA synthetase, beta subunit	0.0	
chr2	231280843	231280948	reg1042389.p1	3.459	+	NM_001080391 NM_001206701 NM_001206702 NM_001206703 NM_003113 TSC_hg19_v1_chr2_+_231280903	-8	+	TSC_hg19_v1_chr2_+_231191907 NM_138402	-88969	+	AK301317 AK301267 NM_001005176 NM_007237 U36499 U36500 U63420 BC105744 BC105960 BC105743 BC054890 BC070160 BC038091	-190432	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	24	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	61	+	AK091898 NM_001206704	575	+	NM_001080391|SP100|6672|SP100 nuclear antigen##NM_001206701|SP100|6672|SP100 nuclear antigen##NM_001206702|SP100|6672|SP100 nuclear antigen##NM_001206703|SP100|6672|SP100 nuclear antigen##NM_003113|SP100|6672|SP100 nuclear antigen##NM_138402|SP140L|93349|SP140 nuclear body protein-like##AK301317|SP140|11262|SP140 nuclear body protein##AK301267|SP140|11262|SP140 nuclear body protein##NM_001005176|SP140|11262|SP140 nuclear body protein##NM_007237|SP140|11262|SP140 nuclear body protein##U36499|SP140|11262|SP140 nuclear body protein##U36500|SP140|11262|SP140 nuclear body protein##U63420|SP140|11262|SP140 nuclear body protein##BC105744|SP140|11262|SP140 nuclear body protein##BC105960|SP140|11262|SP140 nuclear body protein##BC105743|SP140|11262|SP140 nuclear body protein##BC054890|SP140|11262|SP140 nuclear body protein##BC070160|SP140|11262|SP140 nuclear body protein##BC038091|SP140|11262|SP140 nuclear body protein##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen	0.0	
chr2	241505690	241505870	reg1021107.p1	3.459	+	TSC_hg19_v1_chr2_-_241500482 AK056511 AK296714	-5286	-	TSC_hg19_v1_chr2_-_241500194 CR936600 AL136618 CR936759	-5599	-	NM_001033575	-6310	+	TSC_hg19_v1_chr2_+_241507945 NM_018226	2185	+	BC082975 TSC_hg19_v1_chr2_+_241508114	2328	+	TSC_hg19_v1_chr2_+_241526150 NM_023083 NM_023085 AK300279 AF089088 AK074807 BC004260 BC007553 AF089095 AB058748 AF089090 AF089091 AF089092 AF089093 AF089094 AF089096 AB590370 DQ893519 DQ896503	20449	+	AK056511|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AK296714|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##CR936600|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##AL136618|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##CR936759|ANKMY1|51281|ankyrin repeat and MYND domain containing 1##NM_001033575|DUSP28|285193|dual specificity phosphatase 28##NM_018226|RNPEPL1|57140|arginyl aminopeptidase (aminopeptidase B)-like 1##BC082975|RNPEPL1|57140|arginyl aminopeptidase (aminopeptidase B)-like 1##NM_023083|CAPN10|11132|calpain 10##NM_023085|CAPN10|11132|calpain 10##AK300279|CAPN10|11132|calpain 10##AF089088|CAPN10|11132|calpain 10##AK074807|CAPN10|11132|calpain 10##BC004260|CAPN10|11132|calpain 10##BC007553|CAPN10|11132|calpain 10##AB058748|CAPN10|11132|calpain 10##AF089090|CAPN10|11132|calpain 10##AF089091|CAPN10|11132|calpain 10##AF089092|CAPN10|11132|calpain 10##AF089093|CAPN10|11132|calpain 10##AF089094|CAPN10|11132|calpain 10##AF089096|CAPN10|11132|calpain 10##DQ893519|CAPN10|11132|calpain 10##DQ896503|CAPN10|11132|calpain 10	0.0	
chr3	69101451	69101632	reg1042940.p2	3.459	+	AB384853 L01042 BC117418 BC126123 BC143840 TSC_hg19_v1_chr3_-_69101449 AK299020 BC033771 BC008454 AK312697 AB209109 NM_007114	-156	-	TSC_hg19_v1_chr3_-_69062806 BC060887 NM_173654 AK304102 BX648818	-38740	-	TSC_hg19_v1_chr3_-_69037499 AK123213	-64035	-	TSC_hg19_v1_chr3_-_69129517 AB463332 AM392893 AM393088 CR533537 CU692738 DQ893167 DQ896465 AK314751 AK289392 AK002159 AL117566 BC022853 NM_003968 NM_198195 AK298878 AK316540	27982	-	TSC_hg19_v1_chr3_+_69134171 NM_006407 AF070523 AF115965 AF125530 AB097051 AF161476 AK301637 AK303148 AK074612 BC005143 BC107899 BC020797 AB014765 AK223566 AK312731 AB052638 AY102608	32586	+	AM393202 BC121019 BC017925 AL832033 AK300096 AL832709 BC039202 NM_198271	70099	-	L01042|TMF1|7110|TATA element modulatory factor 1##BC117418|TMF1|7110|TATA element modulatory factor 1##BC126123|TMF1|7110|TATA element modulatory factor 1##BC143840|TMF1|7110|TATA element modulatory factor 1##AK299020|TMF1|7110|TATA element modulatory factor 1##BC033771|TMF1|7110|TATA element modulatory factor 1##BC008454|TMF1|7110|TATA element modulatory factor 1##AK312697|TMF1|7110|TATA element modulatory factor 1##AB209109|TMF1|7110|TATA element modulatory factor 1##NM_007114|TMF1|7110|TATA element modulatory factor 1##BC060887|C3orf64|285203|chromosome 3 open reading frame 64##NM_173654|C3orf64|285203|chromosome 3 open reading frame 64##AK304102|C3orf64|285203|chromosome 3 open reading frame 64##BX648818|C3orf64|285203|chromosome 3 open reading frame 64##AK123213|C3orf64|285203|chromosome 3 open reading frame 64##AM392893|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AM393088|UBA3|9039|ubiquitin-like modifier activating enzyme 3##CR533537|UBA3|9039|ubiquitin-like modifier activating enzyme 3##DQ893167|UBA3|9039|ubiquitin-like modifier activating enzyme 3##DQ896465|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK314751|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK289392|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK002159|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AL117566|UBA3|9039|ubiquitin-like modifier activating enzyme 3##BC022853|UBA3|9039|ubiquitin-like modifier activating enzyme 3##NM_003968|UBA3|9039|ubiquitin-like modifier activating enzyme 3##NM_198195|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK298878|UBA3|9039|ubiquitin-like modifier activating enzyme 3##AK316540|UBA3|9039|ubiquitin-like modifier activating enzyme 3##NM_006407|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF070523|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF115965|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF125530|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB097051|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AF161476|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK301637|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK074612|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC005143|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC107899|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##BC020797|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB014765|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK223566|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AK312731|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AB052638|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AY102608|ARL6IP5|10550|ADP-ribosylation-like factor 6 interacting protein 5##AM393202|LMOD3|56203|leiomodin 3 (fetal)##BC121019|LMOD3|56203|leiomodin 3 (fetal)##BC017925|LMOD3|56203|leiomodin 3 (fetal)##AL832033|LMOD3|56203|leiomodin 3 (fetal)##AK300096|LMOD3|56203|leiomodin 3 (fetal)##AL832709|LMOD3|56203|leiomodin 3 (fetal)##BC039202|LMOD3|56203|leiomodin 3 (fetal)##NM_198271|LMOD3|56203|leiomodin 3 (fetal)	0.0	
chr5	124246348	124246452	reg1036647.p1	3.459	+	BC131507 AB033107 BC151226 NM_020747	-165612	-	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1398518	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1487256	-	NM_001146319 AK316288 AK300154	1449414	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1512443	+	TSC_hg19_v1_chr5_+_125759088 AK024966 AK225829 BC008590 AK294656 AK293307 AK296267 AY116970	1512787	+	BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3##AK024966|GRAMD3|65983|GRAM domain containing 3##AK225829|GRAMD3|65983|GRAM domain containing 3##BC008590|GRAMD3|65983|GRAM domain containing 3##AK294656|GRAMD3|65983|GRAM domain containing 3##AK293307|GRAMD3|65983|GRAM domain containing 3##AK296267|GRAMD3|65983|GRAM domain containing 3##AY116970|GRAMD3|65983|GRAM domain containing 3	0.0	
chr6	92428054	92428160	reg1041331.p2	3.459	+	TSC_hg19_v1_chr6_-_91296792 BC017715 AK299268 AK315774 NM_003188 NM_145332 NM_145333	-1131269	-	AB009358 BT019654 BT019655 AB528733 AF218074 TSC_hg19_v1_chr6_-_91296744 AB009356 AB009357 NM_145331	-1131424	-	TSC_hg19_v1_chr6_-_91006590 AK309526 NM_001170794	-1421495	-	CU693332 AB527279 BC126125 BC126151 BC143857 BC143858 TSC_hg19_v1_chr6_-_94129273 L36642 BC027940 AK313529 AB209269 NM_004440	1701076	-	TSC_hg19_v1_chr6_-_96025325 BC047582	3597182	-	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	3597294	+	BC017715|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK299268|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK315774|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_003188|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145332|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145333|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009358|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019654|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##BT019655|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AF218074|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009356|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AB009357|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##NM_145331|MAP3K7|6885|mitogen-activated protein kinase kinase kinase 7##AK309526|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##NM_001170794|BACH2|60468|BTB and CNC homology 1, basic leucine zipper transcription factor 2##BC126125|EPHA7|2045|EPH receptor A7##BC126151|EPHA7|2045|EPH receptor A7##BC143857|EPHA7|2045|EPH receptor A7##BC143858|EPHA7|2045|EPH receptor A7##L36642|EPHA7|2045|EPH receptor A7##BC027940|EPHA7|2045|EPH receptor A7##AK313529|EPHA7|2045|EPH receptor A7##AB209269|EPHA7|2045|EPH receptor A7##NM_004440|EPHA7|2045|EPH receptor A7##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha	0.0	
chr7	23509390	23509570	reg1040319.p2	3.459	+	TSC_hg19_v1_chr7_+_23338957 BC012331 NM_138446 AK127742 AK316559	-170515	+	AF322909 TSC_hg19_v1_chr7_+_23286426 BC025297 BC011595 CU679974 CU689536 AB528457 DQ892084 DQ895277 BT007074	-223032	+	TSC_hg19_v1_chr7_+_23286407 AJ505015	-223075	+	TSC_hg19_v1_chr7_-_23509637 AB529064 CU688032	199	-	BC065269 BC019258 BC051296 U76705 U97188 TSC_hg19_v1_chr7_-_23510015 AF117108 NM_006547	518	-	TSC_hg19_v1_chr7_+_23530136 BC026177	20687	+	BC012331|C7orf30|115416|chromosome 7 open reading frame 30##NM_138446|C7orf30|115416|chromosome 7 open reading frame 30##AK127742|C7orf30|115416|chromosome 7 open reading frame 30##AK316559|C7orf30|115416|chromosome 7 open reading frame 30##AF322909|GPNMB|10457|glycoprotein (transmembrane) nmb##BC025297|GPNMB|10457|glycoprotein (transmembrane) nmb##BC011595|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ892084|GPNMB|10457|glycoprotein (transmembrane) nmb##DQ895277|GPNMB|10457|glycoprotein (transmembrane) nmb##BT007074|GPNMB|10457|glycoprotein (transmembrane) nmb##AJ505015|GPNMB|10457|glycoprotein (transmembrane) nmb##BC065269|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC019258|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC051296|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U76705|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##U97188|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##AF117108|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##NM_006547|IGF2BP3|10643|insulin-like growth factor 2 mRNA binding protein 3##BC026177|RPS2P32|256355|ribosomal protein S2 pseudogene 32	0.123877	
chr9	2017527	2017646	reg1033357.p4	3.459	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	-2290	+	AF130729 NM_181872	-966977	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-967216	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	604221	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	604488	+	S73849 TSC_hg19_v1_chr9_+_2622109 D16493 BC142653	604526	+	BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor##S73849|VLDLR|7436|very low density lipoprotein receptor##D16493|VLDLR|7436|very low density lipoprotein receptor##BC142653|VLDLR|7436|very low density lipoprotein receptor	0.0	
chr10	1038808	1038988	reg1027481.p2	3.458	+	TSC_hg19_v1_chr10_+_1034373 BC008683 BC021243 AF120334 BC038975 AK001548 AK097093 AK222861 AK295231 AF325353 BC033784 AK302219	-4500	+	TSC_hg19_v1_chr10_+_1034348 AK001552 NM_012341	-4557	+	AK130873 TSC_hg19_v1_chr10_-_1034282	-4599	-	BC017778 AK056950 NM_033261	32899	-	TSC_hg19_v1_chr10_-_1094827 X17025 AK222875 BC107893	55935	-	AK311110 TSC_hg19_v1_chr10_-_1094867	55972	-	BC008683|GTPBP4|23560|GTP binding protein 4##BC021243|GTPBP4|23560|GTP binding protein 4##AF120334|GTPBP4|23560|GTP binding protein 4##BC038975|GTPBP4|23560|GTP binding protein 4##AK001548|GTPBP4|23560|GTP binding protein 4##AK097093|GTPBP4|23560|GTP binding protein 4##AK222861|GTPBP4|23560|GTP binding protein 4##AK295231|GTPBP4|23560|GTP binding protein 4##AF325353|GTPBP4|23560|GTP binding protein 4##BC033784|GTPBP4|23560|GTP binding protein 4##AK302219|GTPBP4|23560|GTP binding protein 4##AK001552|GTPBP4|23560|GTP binding protein 4##NM_012341|GTPBP4|23560|GTP binding protein 4##AK130873|LOC100288619|100288619|uncharacterized LOC100288619##BC017778|IDI2|91734|isopentenyl-diphosphate delta isomerase 2##AK056950|IDI2|91734|isopentenyl-diphosphate delta isomerase 2##NM_033261|IDI2|91734|isopentenyl-diphosphate delta isomerase 2##X17025|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AK222875|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##BC107893|IDI1|3422|isopentenyl-diphosphate delta isomerase 1##AK311110|IDI1|3422|isopentenyl-diphosphate delta isomerase 1	0.0	
chr10	114868315	114868419	reg1044902.p1	3.458	+	TSC_hg19_v1_chr10_+_114710785 FJ010164 FJ010165 FJ010173	-157534	+	TSC_hg19_v1_chr10_+_114710005 AK225809 NM_001146274 NM_001146283 NM_001146284 NM_001146285 NM_001146286 NM_001198525 NM_001198526 NM_001198527 NM_001198528 NM_001198529 NM_001198530 NM_001198531 NM_030756 FJ010174 Y11306 AK315243 FJ010168 FJ010169 FJ010172 FJ010166 FJ010167 FJ010170 BC032656 FJ010171 AK299295 AB440195 AB451266 CR536574 HM352838 HM352839 HM352840 HM352841 HM352842 HM352843 HM352844 HM352845 HM352846 HM352847 HM352848 HM352849 HM352850 HM352851 BX648364	-158065	+	TSC_hg19_v1_chr10_-_114207307 AK308026	-661062	-	AK303948 NM_001177660	442222	+	NM_004132 D49742 S83182 BC031412 AK290832 AK303761 AK303759 AB590433 CU689160 DQ890820 DQ893975	444461	+	AM392642 AM393530 BC126407 BC143751 AL831980 AL832025 AL832330 BX640682 AY177620 AY177621 BX641052 BC005933 BC017866 BC058825 BC070130 AK056969 AY081943 NM_006175 NM_198060	555355	-	FJ010164|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010165|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010173|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK225809|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146274|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146283|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146284|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146285|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001146286|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198525|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198526|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198527|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198528|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198529|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198530|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_001198531|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##NM_030756|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010174|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##Y11306|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK315243|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010168|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010169|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010172|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010166|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010167|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010170|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BC032656|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##FJ010171|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK299295|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB440195|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AB451266|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##CR536574|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352838|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352839|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352840|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352841|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352842|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352843|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352844|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352845|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352846|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352847|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352848|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352849|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352850|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##HM352851|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##BX648364|TCF7L2|6934|transcription factor 7-like 2 (T-cell specific, HMG-box)##AK308026|ZDHHC6|64429|zinc finger, DHHC-type containing 6##AK303948|HABP2|3026|hyaluronan binding protein 2##NM_001177660|HABP2|3026|hyaluronan binding protein 2##NM_004132|HABP2|3026|hyaluronan binding protein 2##D49742|HABP2|3026|hyaluronan binding protein 2##S83182|HABP2|3026|hyaluronan binding protein 2##BC031412|HABP2|3026|hyaluronan binding protein 2##AK290832|HABP2|3026|hyaluronan binding protein 2##AK303761|HABP2|3026|hyaluronan binding protein 2##AK303759|HABP2|3026|hyaluronan binding protein 2##DQ890820|HABP2|3026|hyaluronan binding protein 2##DQ893975|HABP2|3026|hyaluronan binding protein 2##AM392642|NRAP|4892|nebulin-related anchoring protein##AM393530|NRAP|4892|nebulin-related anchoring protein##BC126407|NRAP|4892|nebulin-related anchoring protein##BC143751|NRAP|4892|nebulin-related anchoring protein##AL831980|NRAP|4892|nebulin-related anchoring protein##AL832025|NRAP|4892|nebulin-related anchoring protein##AL832330|NRAP|4892|nebulin-related anchoring protein##BX640682|NRAP|4892|nebulin-related anchoring protein##AY177620|NRAP|4892|nebulin-related anchoring protein##AY177621|NRAP|4892|nebulin-related anchoring protein##BX641052|NRAP|4892|nebulin-related anchoring protein##BC005933|NRAP|4892|nebulin-related anchoring protein##BC017866|NRAP|4892|nebulin-related anchoring protein##BC058825|NRAP|4892|nebulin-related anchoring protein##BC070130|NRAP|4892|nebulin-related anchoring protein##AK056969|NRAP|4892|nebulin-related anchoring protein##AY081943|NRAP|4892|nebulin-related anchoring protein##NM_006175|NRAP|4892|nebulin-related anchoring protein##NM_198060|NRAP|4892|nebulin-related anchoring protein	0.715769	CTCF.p2:55:0.651
chr11	309472	309596	reg1042488.p1	3.458	+	NM_006435 TSC_hg19_v1_chr11_+_308199 BC009696 DQ891667 DQ894615 BT009859 CR456894 CR541874 X02490	-1364	+	BC150562 BC150563 NM_001025295	-10013	-	TSC_hg19_v1_chr11_+_289125 AK074155 NM_025092 BC066641	-20392	+	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	4477	+	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	11310	-	TSC_hg19_v1_chr11_-_320925 X57352	11453	-	NM_006435|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC009696|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ891667|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ894615|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BT009859|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR456894|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR541874|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##X02490|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5##AK074155|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##NM_025092|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##BC066641|ATHL1|80162|ATH1, acid trehalase-like 1 (yeast)##J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3##X57352|IFITM3|10410|interferon induced transmembrane protein 3	0.0	
chr1	154668654	154668761	reg1033776.p1	3.458	+	TSC_hg19_v1_chr1_-_154600448 NM_001025107 AK097241	-68242	-	X98561 TSC_hg19_v1_chr1_-_154600438 AB209891 AF084516 BX640741 BX538232	-68293	-	AK304153 TSC_hg19_v1_chr1_-_154580680 X79449 NM_001111 NM_015840 NM_015841	-88007	-	CU692066 HQ448417 AF438203 BC042147 NM_170782	163555	-	BX649146 TSC_hg19_v1_chr1_-_154840541	171794	-	AF031815 Y08263 TSC_hg19_v1_chr1_-_154842763 AJ251016 AK310077 NM_001204087 NM_002249	174039	-	NM_001025107|ADAR|103|adenosine deaminase, RNA-specific##AK097241|ADAR|103|adenosine deaminase, RNA-specific##AB209891|ADAR|103|adenosine deaminase, RNA-specific##AF084516|ADAR|103|adenosine deaminase, RNA-specific##BX640741|ADAR|103|adenosine deaminase, RNA-specific##BX538232|ADAR|103|adenosine deaminase, RNA-specific##AK304153|ADAR|103|adenosine deaminase, RNA-specific##X79449|ADAR|103|adenosine deaminase, RNA-specific##NM_001111|ADAR|103|adenosine deaminase, RNA-specific##NM_015840|ADAR|103|adenosine deaminase, RNA-specific##NM_015841|ADAR|103|adenosine deaminase, RNA-specific##HQ448417|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF438203|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##BC042147|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_170782|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AF031815|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##Y08263|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AJ251016|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##AK310077|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_001204087|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3##NM_002249|KCNN3|3782|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	0.109993	
chr12	103573306	103573374	reg1046467.p1	3.458	+	AB464446 DQ894571 EU176303 TSC_hg19_v1_chr12_+_103352164	-221248	+	AK290539 NM_004316 TSC_hg19_v1_chr12_+_103351451 BC001638 BC004425 BC002341 BC003134 BC031299 L08424	-221819	+	L47726 NM_000277 U49897	-261960	-	AK058052 BC039352 BC117392 BC117394 NM_198521 BC044617 NM_001099336	316406	-	AY311388 AJ295695 NM_017564 AB052958	407721	+	AB032773 TSC_hg19_v1_chr12_-_104234857	661484	-	DQ894571|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##EU176303|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##AK290539|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##NM_004316|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC001638|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC004425|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC002341|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC003134|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##BC031299|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L08424|ASCL1|429|achaete-scute complex homolog 1 (Drosophila)##L47726|PAH|5053|phenylalanine hydroxylase##NM_000277|PAH|5053|phenylalanine hydroxylase##U49897|PAH|5053|phenylalanine hydroxylase##AK058052|C12orf42|374470|chromosome 12 open reading frame 42##BC039352|C12orf42|374470|chromosome 12 open reading frame 42##BC117392|C12orf42|374470|chromosome 12 open reading frame 42##BC117394|C12orf42|374470|chromosome 12 open reading frame 42##NM_198521|C12orf42|374470|chromosome 12 open reading frame 42##BC044617|C12orf42|374470|chromosome 12 open reading frame 42##NM_001099336|C12orf42|374470|chromosome 12 open reading frame 42##AY311388|STAB2|55576|stabilin 2##AJ295695|STAB2|55576|stabilin 2##NM_017564|STAB2|55576|stabilin 2##AB052958|STAB2|55576|stabilin 2##AB032773|NT5DC3|51559|5'-nucleotidase domain containing 3	0.0	
chr12	107140575	107140700	reg1043014.p1	3.458	+	BC028582 NM_032491 AF332192 AK315698 BC030644 CU688514 CU688962 DQ890831 DQ893986	-62104	+	NM_001206691 AB095365 AK302837 AB044245	-145706	+	AB095366 NM_213594 TSC_hg19_v1_chr12_+_106976698 AK291445	-163946	+	TSC_hg19_v1_chr12_+_107168357 NM_018157 BC132689 BC144056 BC034220 AK001482 AY221116	27825	+	TSC_hg19_v1_chr12_+_107349591 NM_152261	208960	+	AK024021 TSC_hg19_v1_chr12_+_107349684 AK001731 BC020522 AK022770	209071	+	BC028582|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_032491|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AF332192|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK315698|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##BC030644|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ890831|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ893986|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_001206691|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095365|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK302837|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB044245|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095366|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_213594|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK291445|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_018157|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC132689|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC144056|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC034220|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AK001482|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AY221116|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##NM_152261|C12orf23|90488|chromosome 12 open reading frame 23##AK024021|C12orf23|90488|chromosome 12 open reading frame 23##AK001731|C12orf23|90488|chromosome 12 open reading frame 23##BC020522|C12orf23|90488|chromosome 12 open reading frame 23##AK022770|C12orf23|90488|chromosome 12 open reading frame 23	0.0	
chr13	99182513	99182580	reg1039700.p1	3.458	+	AF083420 NM_003576	-8251	-	TSC_hg19_v1_chr13_+_99058147 AF339817	-124340	+	AB464689 EU446571 AF539427 BC025388 BC017585 NM_178861	-353041	-	TSC_hg19_v1_chr13_-_99229043 BT019619 CR542227 CU690112 AB590338 DQ890912	46508	-	AF024636 AK297583 AK299140 TSC_hg19_v1_chr13_-_99229127	46576	-	TSC_hg19_v1_chr13_-_99229363 BC035578 BC065378 NM_001032296	46765	-	AF083420|STK24|8428|serine/threonine kinase 24##NM_003576|STK24|8428|serine/threonine kinase 24##EU446571|RNF113B|140432|ring finger protein 113B##AF539427|RNF113B|140432|ring finger protein 113B##BC025388|RNF113B|140432|ring finger protein 113B##BC017585|RNF113B|140432|ring finger protein 113B##NM_178861|RNF113B|140432|ring finger protein 113B##BT019619|STK24|8428|serine/threonine kinase 24##CR542227|STK24|8428|serine/threonine kinase 24##DQ890912|STK24|8428|serine/threonine kinase 24##AF024636|STK24|8428|serine/threonine kinase 24##AK297583|STK24|8428|serine/threonine kinase 24##AK299140|STK24|8428|serine/threonine kinase 24##BC035578|STK24|8428|serine/threonine kinase 24##BC065378|STK24|8428|serine/threonine kinase 24##NM_001032296|STK24|8428|serine/threonine kinase 24	0.0	
chr15	23034608	23034706	reg1044116.p2	3.458	+	TSC_hg19_v1_chr15_-_23034411 AK096305 AK313584 NM_001008860 NM_001008892 NM_001008894 NM_001184888 NM_001184889 NM_030922	-241	-	TSC_hg19_v1_chr15_-_23034365 AK300843	-290	-	TSC_hg19_v1_chr15_-_23034343 BC011775 AY732242	-323	-	AK057846 BC103705 AK314073 AB590048 TSC_hg19_v1_chr15_-_23086444 NM_144599	51717	-	BC025678 NM_001142275	52185	-	TSC_hg19_v1_chr15_-_23115247 BC044583	80591	-	AK096305|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AK313584|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001008860|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001008892|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001008894|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001184888|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_001184889|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##NM_030922|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AK300843|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##BC011775|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AY732242|NIPA2|81614|non imprinted in Prader-Willi/Angelman syndrome 2##AK057846|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##BC103705|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##AK314073|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##NM_144599|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##BC025678|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##NM_001142275|NIPA1|123606|non imprinted in Prader-Willi/Angelman syndrome 1##BC044583|LOC283683|283683|uncharacterized LOC283683	0.013324	
chr15	91107406	91107541	reg1039433.p1	3.458	+	TSC_hg19_v1_chr15_+_91073154 AK090443 NM_001042574 NM_022769 BC019060 AY360173	-34277	+	TSC_hg19_v1_chr15_+_90931530 BC089385 BC064971 BC139731 BC020549 BC037425 BC110811 AK307643 AB384432	-175934	+	TSC_hg19_v1_chr15_+_90931506 BC005906	-175967	+	TSC_hg19_v1_chr15_+_91260593 BC062697 NM_000057 U39817 BC107423 BC115028 BC115029 BC115030 BC115031 BC115032 AK314262 BC034480 BC101567 BC143280 BC143288 BC093622	153141	+	NM_002569 X17094	304411	+	NM_001143785 AK300605 AK300595 AK309530 NM_002005 AK312545 TSC_hg19_v1_chr15_+_91427733 X52192 BC035357	320228	+	AK090443|CRTC3|64784|CREB regulated transcription coactivator 3##NM_001042574|CRTC3|64784|CREB regulated transcription coactivator 3##NM_022769|CRTC3|64784|CREB regulated transcription coactivator 3##BC019060|CRTC3|64784|CREB regulated transcription coactivator 3##AY360173|CRTC3|64784|CREB regulated transcription coactivator 3##BC089385|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC064971|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC139731|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC020549|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC037425|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC110811|IQGAP1|8826|IQ motif containing GTPase activating protein 1##AK307643|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC005906|IQGAP1|8826|IQ motif containing GTPase activating protein 1##BC062697|BLM|641|Bloom syndrome, RecQ helicase-like##NM_000057|BLM|641|Bloom syndrome, RecQ helicase-like##U39817|BLM|641|Bloom syndrome, RecQ helicase-like##BC107423|BLM|641|Bloom syndrome, RecQ helicase-like##BC115028|BLM|641|Bloom syndrome, RecQ helicase-like##BC115029|BLM|641|Bloom syndrome, RecQ helicase-like##BC115030|BLM|641|Bloom syndrome, RecQ helicase-like##BC115031|BLM|641|Bloom syndrome, RecQ helicase-like##BC115032|BLM|641|Bloom syndrome, RecQ helicase-like##AK314262|BLM|641|Bloom syndrome, RecQ helicase-like##BC034480|BLM|641|Bloom syndrome, RecQ helicase-like##BC101567|BLM|641|Bloom syndrome, RecQ helicase-like##BC143280|BLM|641|Bloom syndrome, RecQ helicase-like##BC143288|BLM|641|Bloom syndrome, RecQ helicase-like##BC093622|BLM|641|Bloom syndrome, RecQ helicase-like##NM_002569|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##X17094|FURIN|5045|furin (paired basic amino acid cleaving enzyme)##NM_001143785|FES|2242|feline sarcoma oncogene##AK300605|FES|2242|feline sarcoma oncogene##AK300595|FES|2242|feline sarcoma oncogene##AK309530|FES|2242|feline sarcoma oncogene##NM_002005|FES|2242|feline sarcoma oncogene##AK312545|FES|2242|feline sarcoma oncogene##X52192|FES|2242|feline sarcoma oncogene##BC035357|FES|2242|feline sarcoma oncogene	0.0	
chr16	10008225	10008405	reg1030717.p1	3.458	+	TSC_hg19_v1_chr16_+_9185577 BC113570	-822712	+	TSC_hg19_v1_chr16_+_9185545 NM_014117	-822775	+	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	-951020	-	BC143273 U09002 NM_001134408	267518	-	AK308862 TSC_hg19_v1_chr16_-_10276243 AB209695 NM_001134407	267873	-	NM_000833 U90277 TSC_hg19_v1_chr16_-_10276744	268362	-	BC113570|C16orf72|29035|chromosome 16 open reading frame 72##NM_014117|C16orf72|29035|chromosome 16 open reading frame 72##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##BC143273|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U09002|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134408|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AK308862|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##AB209695|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_001134407|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##NM_000833|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A##U90277|GRIN2A|2903|glutamate receptor, ionotropic, N-methyl D-aspartate 2A	0.0	
chr16	85953341	85953410	reg1031832.p1	3.458	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-20589	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-120040	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-120070	+	TSC_hg19_v1_chr16_-_86542463 AK091834	589089	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	590781	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	590865	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.0	
chr17	1090789	1090871	reg1001060.p2	3.458	+	TSC_hg19_v1_chr17_-_1090565 AK126882 AK124547 NM_001159746	-242	-	AK302682 AB384846 TSC_hg19_v1_chr17_-_1083048 NM_021962 U01147	-7761	-	TSC_hg19_v1_chr17_-_1029059 AK307827	-61756	-	NM_001164405	83027	+	AB090231 NM_172367 BC142615	92134	+	TSC_hg19_v1_chr17_-_1248347 L13388	157526	-	AK126882|ABR|29|active BCR-related gene##AK124547|ABR|29|active BCR-related gene##NM_001159746|ABR|29|active BCR-related gene##AK302682|ABR|29|active BCR-related gene##NM_021962|ABR|29|active BCR-related gene##U01147|ABR|29|active BCR-related gene##AK307827|ABR|29|active BCR-related gene##NM_001164405|BHLHA9|727857|basic helix-loop-helix family, member a9##AB090231|TUSC5|286753|tumor suppressor candidate 5##NM_172367|TUSC5|286753|tumor suppressor candidate 5##BC142615|TUSC5|286753|tumor suppressor candidate 5##L13388|PAFAH1B1|5048|platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)	0.0	
chr20	22087100	22087216	reg1034877.p1	3.458	+	TSC_hg19_v1_chr20_+_21686519 BC143791 BC143793	-400625	+	TSC_hg19_v1_chr20_+_21686296 NM_006192	-400864	+	NM_002509	-592495	-	BC006545 BC019288 AB464525 DQ892883 DQ896132 TSC_hg19_v1_chr20_-_22564902 AK301611 BC011780	477758	-	TSC_hg19_v1_chr20_-_22565060 NM_021784	477917	-	AB028021 TSC_hg19_v1_chr20_-_22566094 NM_153675	478944	-	BC143791|PAX1|5075|paired box 1##BC143793|PAX1|5075|paired box 1##NM_006192|PAX1|5075|paired box 1##NM_002509|NKX2-2|4821|NK2 homeobox 2##BC006545|FOXA2|3170|forkhead box A2##BC019288|FOXA2|3170|forkhead box A2##DQ892883|FOXA2|3170|forkhead box A2##DQ896132|FOXA2|3170|forkhead box A2##AK301611|FOXA2|3170|forkhead box A2##BC011780|FOXA2|3170|forkhead box A2##NM_021784|FOXA2|3170|forkhead box A2##AB028021|FOXA2|3170|forkhead box A2##NM_153675|FOXA2|3170|forkhead box A2	0.987066	CTCF.p2:-18:0.987
chr20	48403326	48403444	reg1036530.p1	3.458	+	TSC_hg19_v1_chr20_-_48330471 NM_004776	-72919	-	AB004550 TSC_hg19_v1_chr20_-_48330359	-73029	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	-73155	-	NM_015266 TSC_hg19_v1_chr20_+_48429364 AK300318	25923	+	CR749638 TSC_hg19_v1_chr20_+_48429436 AB023156 BC112213 AK295803 AK308328 AK131001 AK295665 AK310530 AK295822	26033	+	AK289644 NM_001135773	126890	-	NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_015266|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK300318|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##CR749638|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AB023156|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##BC112213|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295803|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK308328|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK131001|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295665|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK310530|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295822|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK289644|SPATA2|9825|spermatogenesis associated 2##NM_001135773|SPATA2|9825|spermatogenesis associated 2	0.018761	
chr22	17490681	17490771	reg1033349.p1	3.458	+	AB076978 NM_001037814	-1615	-	BC137521 BC137522 BC144679 AY989815 AK098608 AY534240 BC045548 NM_175878	-188157	-	CU689750 BC139842 BC139926 CU013107 CU013395 DQ892082 DQ895275 GQ129410 GQ129411 AB462978 CR456508 BC100811 BC100812 BC100813 BC022006 BC033797 NM_014406	-417157	-	TSC_hg19_v1_chr22_+_17565850 NM_014339	75125	+	TSC_hg19_v1_chr22_+_17565906 BC011624	75176	+	TSC_hg19_v1_chr22_+_17565921 CT841520 BC012071 U58917 AB527163 CU013105 CU013393 DQ891962 DQ895152 JF305973	75224	+	AB076978|GAB4|128954|GRB2-associated binding protein family, member 4##NM_001037814|GAB4|128954|GRB2-associated binding protein family, member 4##BC137521|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC137522|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC144679|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY989815|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AK098608|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##AY534240|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC045548|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##NM_175878|XKR3|150165|XK, Kell blood group complex subunit-related family, member 3##BC139842|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC139926|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ892082|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##DQ895275|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129410|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##GQ129411|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##CR456508|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100811|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100812|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC100813|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC022006|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##BC033797|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014406|CCT8L2|150160|chaperonin containing TCP1, subunit 8 (theta)-like 2##NM_014339|IL17RA|23765|interleukin 17 receptor A##BC011624|IL17RA|23765|interleukin 17 receptor A##CT841520|IL17RA|23765|interleukin 17 receptor A##BC012071|IL17RA|23765|interleukin 17 receptor A##U58917|IL17RA|23765|interleukin 17 receptor A##DQ891962|IL17RA|23765|interleukin 17 receptor A##DQ895152|IL17RA|23765|interleukin 17 receptor A##JF305973|IL17RA|23765|interleukin 17 receptor A	0.950302	CTCF.p2:17:0.950
chr2	43453320	43453415	reg1027787.p2	3.458	+	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-22	-	CR457063 DQ891168 DQ894350 TSC_hg19_v1_chr2_-_43019720 Z29481 BC029510 AK295693 NM_012205	-433616	-	AY158687 AB528920 AB083055 BC063549 NM_148962	-462067	-	TSC_hg19_v1_chr2_-_43453736 BC020369	363	-	TSC_hg19_v1_chr2_-_43453744 NM_006887	375	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	369781	-	DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##CR457063|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ891168|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##DQ894350|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##Z29481|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##BC029510|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AK295693|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##NM_012205|HAAO|23498|3-hydroxyanthranilate 3,4-dioxygenase##AY158687|OXER1|165140|oxoeicosanoid (OXE) receptor 1##AB083055|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC063549|OXER1|165140|oxoeicosanoid (OXE) receptor 1##NM_148962|OXER1|165140|oxoeicosanoid (OXE) receptor 1##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated	0.0	
chr6	108882112	108882190	reg1042194.p2	3.458	+	BC068552 NM_001455 TSC_hg19_v1_chr6_+_108882081 AK092357	-76	+	TSC_hg19_v1_chr6_+_108881027 NM_201559 BC020227 BC021224	-1128	+	TSC_hg19_v1_chr6_+_108616194 AF520418 BC018445 NM_145315	-266012	+	TSC_hg19_v1_chr6_+_108882119 AJ001589 AK122861 AB591039 CU676878	106	+	TSC_hg19_v1_chr6_+_109169624 AK294574 NM_032131 AK292499 BC030603	287470	+	AF033121 NM_001199934	448039	-	BC068552|FOXO3|2309|forkhead box O3##NM_001455|FOXO3|2309|forkhead box O3##AK092357|FOXO3|2309|forkhead box O3##NM_201559|FOXO3|2309|forkhead box O3##BC020227|FOXO3|2309|forkhead box O3##BC021224|FOXO3|2309|forkhead box O3##AF520418|LACE1|246269|lactation elevated 1##BC018445|LACE1|246269|lactation elevated 1##NM_145315|LACE1|246269|lactation elevated 1##AJ001589|FOXO3|2309|forkhead box O3##AK122861|FOXO3|2309|forkhead box O3##AK294574|ARMC2|84071|armadillo repeat containing 2##NM_032131|ARMC2|84071|armadillo repeat containing 2##AK292499|ARMC2|84071|armadillo repeat containing 2##BC030603|ARMC2|84071|armadillo repeat containing 2##AF033121|SESN1|27244|sestrin 1##NM_001199934|SESN1|27244|sestrin 1	0.010418	
chr8	145013857	145014008	reg1031780.p1	3.458	+	AF330791 TSC_hg19_v1_chr8_-_145013766 AY480051 NM_201384	-229	-	AB051895 NM_031308	-66499	-	TSC_hg19_v1_chr8_-_144923180 BC071605 AK293943 NM_178564	-90773	-	AY480050 NM_201383 TSC_hg19_v1_chr8_-_145016793	2829	-	AF330792 AY480049 TSC_hg19_v1_chr8_-_145018117 NM_201382	4172	-	AY480048 NM_201381	4972	-	AY480051|PLEC|5339|plectin##NM_201384|PLEC|5339|plectin##AB051895|EPPK1|83481|epiplakin 1##NM_031308|EPPK1|83481|epiplakin 1##BC071605|NRBP2|340371|nuclear receptor binding protein 2##AK293943|NRBP2|340371|nuclear receptor binding protein 2##NM_178564|NRBP2|340371|nuclear receptor binding protein 2##AY480050|PLEC|5339|plectin##NM_201383|PLEC|5339|plectin##AF330792|PLEC|5339|plectin##AY480049|PLEC|5339|plectin##NM_201382|PLEC|5339|plectin##AY480048|PLEC|5339|plectin##NM_201381|PLEC|5339|plectin	0.025489	
chr8	54793359	54793540	reg1024331.p1	3.458	+	AY046538 NM_170587 AF366054 AF366055 AF366056	-29036	+	AF113222 TSC_hg19_v1_chr8_-_54755840 NM_015941 NM_213619 AK303229	-37597	-	AK022345 TSC_hg19_v1_chr8_-_54755834	-37622	-	TSC_hg19_v1_chr8_+_54793431 AK094503 BC063490 NM_003702 BC054867 BC018618 BC031328	3	+	TSC_hg19_v1_chr8_+_54793579 AF060877 HQ257937 BC015614	113	+	BT019995 CR542221 AB464783 AK290454 TSC_hg19_v1_chr8_-_54934848 X62585 BC072460 X57198 AK026617 AK297957 BX538034 AK297729	141318	-	AY046538|RGS20|8601|regulator of G-protein signaling 20##NM_170587|RGS20|8601|regulator of G-protein signaling 20##AF366054|RGS20|8601|regulator of G-protein signaling 20##AF366055|RGS20|8601|regulator of G-protein signaling 20##AF366056|RGS20|8601|regulator of G-protein signaling 20##AF113222|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_015941|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##NM_213619|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK303229|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK022345|ATP6V1H|51606|ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H##AK094503|RGS20|8601|regulator of G-protein signaling 20##BC063490|RGS20|8601|regulator of G-protein signaling 20##NM_003702|RGS20|8601|regulator of G-protein signaling 20##BC018618|RGS20|8601|regulator of G-protein signaling 20##BC031328|RGS20|8601|regulator of G-protein signaling 20##AF060877|RGS20|8601|regulator of G-protein signaling 20##HQ257937|RGS20|8601|regulator of G-protein signaling 20##BC015614|RGS20|8601|regulator of G-protein signaling 20##BT019995|TCEA1|6917|transcription elongation factor A (SII), 1##CR542221|TCEA1|6917|transcription elongation factor A (SII), 1##AK290454|TCEA1|6917|transcription elongation factor A (SII), 1##X62585|TCEA1|6917|transcription elongation factor A (SII), 1##BC072460|TCEA1|6917|transcription elongation factor A (SII), 1##X57198|TCEA1|6917|transcription elongation factor A (SII), 1##AK026617|TCEA1|6917|transcription elongation factor A (SII), 1##AK297957|TCEA1|6917|transcription elongation factor A (SII), 1##BX538034|TCEA1|6917|transcription elongation factor A (SII), 1##AK297729|TCEA1|6917|transcription elongation factor A (SII), 1	0.103921	
chrX	6935976	6936097	reg1045753.p1	3.458	+	AF167078 AF167079 NM_016379	-482878	-	AK055471 BC034018 NM_181332	-789356	-	AB033086 AF376803 AX773938 NM_020742	-790149	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	129915	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	130156	-	NM_000351 M16505 J04964 AK314034	201465	+	AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S	0.974049	CTCF.p2:-4:0.974
chr10	72117338	72117455	reg1037454.p1	3.457	+	TSC_hg19_v1_chr10_-_72083680 AL122117	-33698	-	NM_022146	-73947	-	AF108211 AB590125 AF217186 DQ893597 AB026723 TSC_hg19_v1_chr10_-_71993148 BC107882 AF154065 BC105034 BC105036 AF092439 AF119665 BC001022 BC061581 AK058193 NM_021129	-124243	-	BC024001 AY358318 NM_207119	23984	-	AK094734 TSC_hg19_v1_chr10_-_72142380 AK001613 AK001706 NM_018205 NM_018239	24968	-	NM_004096 TSC_hg19_v1_chr10_+_72163879	46474	+	AL122117|LRRC20|55222|leucine rich repeat containing 20##NM_022146|NPFFR1|64106|neuropeptide FF receptor 1##AF108211|PPA1|5464|pyrophosphatase (inorganic) 1##AF217186|PPA1|5464|pyrophosphatase (inorganic) 1##DQ893597|PPA1|5464|pyrophosphatase (inorganic) 1##AB026723|PPA1|5464|pyrophosphatase (inorganic) 1##BC107882|PPA1|5464|pyrophosphatase (inorganic) 1##AF154065|PPA1|5464|pyrophosphatase (inorganic) 1##BC105034|PPA1|5464|pyrophosphatase (inorganic) 1##BC105036|PPA1|5464|pyrophosphatase (inorganic) 1##AF092439|PPA1|5464|pyrophosphatase (inorganic) 1##AF119665|PPA1|5464|pyrophosphatase (inorganic) 1##BC001022|PPA1|5464|pyrophosphatase (inorganic) 1##BC061581|PPA1|5464|pyrophosphatase (inorganic) 1##AK058193|PPA1|5464|pyrophosphatase (inorganic) 1##NM_021129|PPA1|5464|pyrophosphatase (inorganic) 1##BC024001|LRRC20|55222|leucine rich repeat containing 20##AY358318|LRRC20|55222|leucine rich repeat containing 20##NM_207119|LRRC20|55222|leucine rich repeat containing 20##AK094734|LRRC20|55222|leucine rich repeat containing 20##AK001613|LRRC20|55222|leucine rich repeat containing 20##AK001706|LRRC20|55222|leucine rich repeat containing 20##NM_018205|LRRC20|55222|leucine rich repeat containing 20##NM_018239|LRRC20|55222|leucine rich repeat containing 20##NM_004096|EIF4EBP2|1979|eukaryotic translation initiation factor 4E binding protein 2	0.0	
chr12	121715038	121715136	reg1041437.p1	3.457	+	AF101264 TSC_hg19_v1_chr12_-_121712132 AK024748	-3026	-	TSC_hg19_v1_chr12_+_121647948 BC035845 Y07684 BC033826 AB464108 DQ890906 DQ894059 CU689766 AK225604 BT019738 BT019739 AK301080 AF000234	-67085	+	TSC_hg19_v1_chr12_+_121647931 AK293599 AK293660 AK297704 AK308549 AK308868 BC017458	-67195	+	TSC_hg19_v1_chr12_-_121734513 BC026060 AF140507 AF425668 AK300865	19420	-	TSC_hg19_v1_chr12_-_121734549 NM_172226	19538	-	TSC_hg19_v1_chr12_-_121735623 AK292072	20508	-	AF101264|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK024748|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##BC035845|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##Y07684|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC033826|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##DQ890906|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##DQ894059|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK225604|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BT019738|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BT019739|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK301080|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AF000234|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293599|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK293660|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK297704|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308549|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##AK308868|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC017458|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##BC026060|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF140507|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AF425668|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK300865|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##NM_172226|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta##AK292072|CAMKK2|10645|calcium/calmodulin-dependent protein kinase kinase 2, beta	0.0	
chr15	25962746	25962877	reg1041934.p2	3.457	+	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	-278633	-	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	-278710	-	L07557 NM_130838	-312162	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	145542	-	AB051358 TSC_hg19_v1_chr15_-_26108932	146089	-	AK295167 NM_001191321 TSC_hg19_v1_chr15_-_26874238 BC038837	911469	-	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##AB051358|ATP10A|57194|ATPase, class V, type 10A##AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	0.0	
chr15	33508713	33508808	reg1024014.p2	3.457	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-148525	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-497594	-	AK095741 TSC_hg19_v1_chr15_+_33010204 AK095890 AK095972 AK312265 NM_001191322 NM_001191323 NM_013372 AY232290 AF110137 BC093778 BC101611	-498503	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	94409	+	TSC_hg19_v1_chr15_-_34212524 BC037796	703798	-	AK095198 NM_012125	752328	+	NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095741|GREM1|26585|gremlin 1##AK095890|GREM1|26585|gremlin 1##AK095972|GREM1|26585|gremlin 1##AK312265|GREM1|26585|gremlin 1##NM_001191322|GREM1|26585|gremlin 1##NM_001191323|GREM1|26585|gremlin 1##NM_013372|GREM1|26585|gremlin 1##AY232290|GREM1|26585|gremlin 1##AF110137|GREM1|26585|gremlin 1##BC093778|GREM1|26585|gremlin 1##BC101611|GREM1|26585|gremlin 1##AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5	0.784136	
chr15	71266515	71266635	reg1031874.p1	3.457	+	BC026157 NM_001199017 NM_017691 AK225137 AK000163 NM_001199018 BC037982 AK295547 AK301971	-81600	+	CU693296 DQ890927 DQ894089 EU176528 AL360202 TSC_hg19_v1_chr15_-_71184737 BC027857 BC072414 AK313472 NM_020147	-81884	-	CU675231 BC006082 BC009446 BC014018 AL833876 BC039153 TSC_hg19_v1_chr15_-_71146496 AK130092 AF443828 AF443829 AK002058 NM_018357 NM_197958	-120107	-	BC048128 AL080151 BC039359 NM_001102658 TSC_hg19_v1_chr15_-_71407943	141296	-	NM_024817 BC140868	167235	+	AK299056 AK303870 BX648716 TSC_hg19_v1_chr15_+_71839574 AY358143	573005	+	BC026157|LRRC49|54839|leucine rich repeat containing 49##NM_001199017|LRRC49|54839|leucine rich repeat containing 49##NM_017691|LRRC49|54839|leucine rich repeat containing 49##AK225137|LRRC49|54839|leucine rich repeat containing 49##AK000163|LRRC49|54839|leucine rich repeat containing 49##NM_001199018|LRRC49|54839|leucine rich repeat containing 49##BC037982|LRRC49|54839|leucine rich repeat containing 49##AK295547|LRRC49|54839|leucine rich repeat containing 49##AK301971|LRRC49|54839|leucine rich repeat containing 49##DQ890927|THAP10|56906|THAP domain containing 10##DQ894089|THAP10|56906|THAP domain containing 10##EU176528|THAP10|56906|THAP domain containing 10##AL360202|THAP10|56906|THAP domain containing 10##BC027857|THAP10|56906|THAP domain containing 10##BC072414|THAP10|56906|THAP domain containing 10##AK313472|THAP10|56906|THAP domain containing 10##NM_020147|THAP10|56906|THAP domain containing 10##BC006082|LARP6|55323|La ribonucleoprotein domain family, member 6##BC009446|LARP6|55323|La ribonucleoprotein domain family, member 6##BC014018|LARP6|55323|La ribonucleoprotein domain family, member 6##AL833876|LARP6|55323|La ribonucleoprotein domain family, member 6##BC039153|LARP6|55323|La ribonucleoprotein domain family, member 6##AK130092|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443828|LARP6|55323|La ribonucleoprotein domain family, member 6##AF443829|LARP6|55323|La ribonucleoprotein domain family, member 6##AK002058|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_018357|LARP6|55323|La ribonucleoprotein domain family, member 6##NM_197958|LARP6|55323|La ribonucleoprotein domain family, member 6##BC048128|CT62|196993|cancer/testis antigen 62##AL080151|CT62|196993|cancer/testis antigen 62##BC039359|CT62|196993|cancer/testis antigen 62##NM_001102658|CT62|196993|cancer/testis antigen 62##NM_024817|THSD4|79875|thrombospondin, type I, domain containing 4##BC140868|THSD4|79875|thrombospondin, type I, domain containing 4##AK299056|THSD4|79875|thrombospondin, type I, domain containing 4##AK303870|THSD4|79875|thrombospondin, type I, domain containing 4##BX648716|THSD4|79875|thrombospondin, type I, domain containing 4##AY358143|THSD4|79875|thrombospondin, type I, domain containing 4	0.884949	CTCF.p2:-45:0.885
chr15	84609028	84609209	reg1038320.p2	3.457	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-286291	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-492890	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-493058	+	NM_001243531	232123	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	535163	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	588354	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.0	
chr16	11391695	11391796	reg1026023.p2	3.457	+	BT006746 AY651260 Y00443 AK311987 BC003673 NM_002761	-16603	-	BC042671 X07862 AK130957 AK131573 AK292447 AK307320 AK311798 BC005303 BC066338 NM_002762	-21425	-	NM_021247	-24294	-	TSC_hg19_v1_chr16_+_11439303 AK123764 BC031016 BC022427 NM_152308	47549	+	TSC_hg19_v1_chr16_+_11439315 BC013040	47573	+	BC096063 BC096064 BC096065 BC096066 BC101401 BC101969 BC101402 AB034747 NM_004862 U77396	288442	-	BT006746|PRM1|5619|protamine 1##AY651260|PRM1|5619|protamine 1##Y00443|PRM1|5619|protamine 1##AK311987|PRM1|5619|protamine 1##BC003673|PRM1|5619|protamine 1##NM_002761|PRM1|5619|protamine 1##BC042671|PRM2|5620|protamine 2##X07862|PRM2|5620|protamine 2##AK130957|PRM2|5620|protamine 2##AK131573|PRM2|5620|protamine 2##AK292447|PRM2|5620|protamine 2##AK311798|PRM2|5620|protamine 2##BC005303|PRM2|5620|protamine 2##BC066338|PRM2|5620|protamine 2##NM_002762|PRM2|5620|protamine 2##NM_021247|PRM3|58531|protamine 3##AK123764|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC031016|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC022427|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##NM_152308|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC013040|RMI2|116028|RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)##BC096063|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096064|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096065|LITAF|9516|lipopolysaccharide-induced TNF factor##BC096066|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101401|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101969|LITAF|9516|lipopolysaccharide-induced TNF factor##BC101402|LITAF|9516|lipopolysaccharide-induced TNF factor##AB034747|LITAF|9516|lipopolysaccharide-induced TNF factor##NM_004862|LITAF|9516|lipopolysaccharide-induced TNF factor##U77396|LITAF|9516|lipopolysaccharide-induced TNF factor	0.0	
chr17	44636651	44636769	reg1040747.p1	3.457	+	BC040501 CR749232 NM_001006607	-46635	+	BC020869 AK289590 AK315857 BC041803 BC030570 BX647266 NM_001039083 NM_001103154 NM_001113738 NM_016632	-197588	-	BC040501 CR749232 NM_014834	-264214	+	BC020869 AB209344 AF208864 BX647266 NM_001113738 NM_016632	20337	-	NM_006178 AF135168 AF102846 AK294001 AK294727 AK294886 AK299786 BC030613 AK226078 AK290204 AK316057 U03985	31367	+	AB464356 AB067628 BC114219 BC112116 BC112118 AY009397 NM_030753	259311	-	BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_001006607|LRRC37A2|474170|leucine rich repeat containing 37, member A2##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AK289590|ARL17A|51326|ADP-ribosylation factor-like 17A##AK315857|ARL17A|51326|ADP-ribosylation factor-like 17A##BC041803|ARL17A|51326|ADP-ribosylation factor-like 17A##BC030570|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001039083|ARL17B|100506084|ADP-ribosylation factor-like 17B##NM_001103154|ARL17B|100506084|ADP-ribosylation factor-like 17B##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A##BC040501|LRRC37A|9884|leucine rich repeat containing 37A##CR749232|LRRC37A|9884|leucine rich repeat containing 37A##NM_014834|LRRC37A|9884|leucine rich repeat containing 37A##BC020869|ARL17A|51326|ADP-ribosylation factor-like 17A##AB209344|ARL17A|51326|ADP-ribosylation factor-like 17A##AF208864|ARL17A|51326|ADP-ribosylation factor-like 17A##BX647266|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_001113738|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_016632|ARL17A|51326|ADP-ribosylation factor-like 17A##NM_006178|NSF|4905|N-ethylmaleimide-sensitive factor##AF135168|NSF|4905|N-ethylmaleimide-sensitive factor##AF102846|NSF|4905|N-ethylmaleimide-sensitive factor##AK294001|NSF|4905|N-ethylmaleimide-sensitive factor##AK294727|NSF|4905|N-ethylmaleimide-sensitive factor##AK294886|NSF|4905|N-ethylmaleimide-sensitive factor##AK299786|NSF|4905|N-ethylmaleimide-sensitive factor##BC030613|NSF|4905|N-ethylmaleimide-sensitive factor##AK226078|NSF|4905|N-ethylmaleimide-sensitive factor##AK290204|NSF|4905|N-ethylmaleimide-sensitive factor##AK316057|NSF|4905|N-ethylmaleimide-sensitive factor##U03985|NSF|4905|N-ethylmaleimide-sensitive factor##AB067628|WNT3|7473|wingless-type MMTV integration site family, member 3##BC114219|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112116|WNT3|7473|wingless-type MMTV integration site family, member 3##BC112118|WNT3|7473|wingless-type MMTV integration site family, member 3##AY009397|WNT3|7473|wingless-type MMTV integration site family, member 3##NM_030753|WNT3|7473|wingless-type MMTV integration site family, member 3	0.023164	
chr2	216878310	216878400	reg1034982.p1	3.457	+	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	-19	-	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-577573	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-577835	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	68189	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	68337	+	TSC_hg19_v1_chr2_+_216974084 NM_021141	95697	+	AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169##NM_021141|XRCC5|7520|X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)	0.045505	
chr2	224904312	224904439	reg1037558.p1	3.457	+	TSC_hg19_v1_chr2_-_224904004 BC015663 AK225823 AK297588 AK312499 NM_001136528 NM_006216	-205	-	AK295564 NM_001136530	-1035	-	M17783 CU677383 CU692108 DQ893191 DQ893684 DQ893685 DQ896516 DQ896862 DQ896863 TSC_hg19_v1_chr2_-_224866627 AB590658	-37747	-	BC025754 NM_001122779 NM_024785 AK026399	362355	-	AF052147 BC031844 TSC_hg19_v1_chr2_-_225370764	466353	-	U58089 TSC_hg19_v1_chr2_-_225378353	473961	-	BC015663|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK225823|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK297588|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK312499|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136528|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_006216|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##AK295564|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##NM_001136530|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##M17783|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893191|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893684|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ893685|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896516|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896862|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##DQ896863|SERPINE2|5270|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2##BC025754|FAM124B|79843|family with sequence similarity 124B##NM_001122779|FAM124B|79843|family with sequence similarity 124B##NM_024785|FAM124B|79843|family with sequence similarity 124B##AK026399|FAM124B|79843|family with sequence similarity 124B##AF052147|CUL3|8452|cullin 3##BC031844|CUL3|8452|cullin 3##U58089|CUL3|8452|cullin 3	0.322631	CTCF.p2:10:0.323
chr2	242538022	242538120	reg1035147.p1	3.457	+	TSC_hg19_v1_chr2_+_242498159 NM_032515 AF174487 BC006203 BC017214	-39852	+	TSC_hg19_v1_chr2_-_242448000 BC091505 AK315966 BC007852 NM_006374	-90040	-	TSC_hg19_v1_chr2_-_242447969 AK092161 AK302751 AK297374 AK301214 AK291808 AK291947	-90112	-	AK225608 AF132970 NM_001164356	18828	-	BC000767 BC001842 BC071896 BC094822 AK001216 TSC_hg19_v1_chr2_-_242572947	34791	-	TSC_hg19_v1_chr2_-_242576496 AF258556	38383	-	NM_032515|BOK|666|BCL2-related ovarian killer##AF174487|BOK|666|BCL2-related ovarian killer##BC006203|BOK|666|BCL2-related ovarian killer##BC017214|BOK|666|BCL2-related ovarian killer##BC091505|STK25|10494|serine/threonine kinase 25##AK315966|STK25|10494|serine/threonine kinase 25##BC007852|STK25|10494|serine/threonine kinase 25##NM_006374|STK25|10494|serine/threonine kinase 25##AK092161|STK25|10494|serine/threonine kinase 25##AK302751|STK25|10494|serine/threonine kinase 25##AK297374|STK25|10494|serine/threonine kinase 25##AK301214|STK25|10494|serine/threonine kinase 25##AK291808|STK25|10494|serine/threonine kinase 25##AK291947|STK25|10494|serine/threonine kinase 25##AK225608|THAP4|51078|THAP domain containing 4##AF132970|THAP4|51078|THAP domain containing 4##NM_001164356|THAP4|51078|THAP domain containing 4##BC000767|THAP4|51078|THAP domain containing 4##BC001842|THAP4|51078|THAP domain containing 4##BC071896|THAP4|51078|THAP domain containing 4##BC094822|THAP4|51078|THAP domain containing 4##AK001216|THAP4|51078|THAP domain containing 4##AF258556|THAP4|51078|THAP domain containing 4	0.968624	CTCF.p2:19:0.944
chr7	108446249	108446352	reg1019683.p1	3.457	+	TSC_hg19_v1_chr7_+_108210317 AL080081 AB026908 AF083247 BC028912 AF115512 AF093824	-235926	+	TSC_hg19_v1_chr7_+_108210292 AK092204	-236002	+	NM_012328 TSC_hg19_v1_chr7_+_108210266	-236066	+	NM_001024607	78336	-	NM_001099658 NM_001099660 NM_018334 AK001991 BC035133 TSC_hg19_v1_chr7_+_110731182	2284823	+	AF359563 NM_032549 TSC_hg19_v1_chr7_-_111202539 AK311968 BC008497 NM_001244606	2756184	-	AL080081|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AB026908|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF083247|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##BC028912|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AF093824|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##AK092204|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_012328|DNAJB9|4189|DnaJ (Hsp40) homolog, subfamily B, member 9##NM_001024607|C7orf66|154907|chromosome 7 open reading frame 66##NM_001099658|LRRN3|54674|leucine rich repeat neuronal 3##NM_001099660|LRRN3|54674|leucine rich repeat neuronal 3##NM_018334|LRRN3|54674|leucine rich repeat neuronal 3##AK001991|LRRN3|54674|leucine rich repeat neuronal 3##BC035133|LRRN3|54674|leucine rich repeat neuronal 3##AF359563|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_032549|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##AK311968|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##BC008497|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)##NM_001244606|IMMP2L|83943|IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)	0.0	
chr7	97448662	97448756	reg1037716.p1	3.457	+	NM_003182 NM_013996 NM_013997 NM_013998 U37529 AK222957 BC018047 X54469	-87357	+	TSC_hg19_v1_chr7_+_96747012 BC022858 AF201933 BC020621	-701679	+	BC028409 NM_020186	-702805	+	AK302242 AK000379 NM_001178077 NM_133436	52741	-	BC008723 TSC_hg19_v1_chr7_-_97501721 BC014621	52995	-	TSC_hg19_v1_chr7_-_97501785 AK302189 M27396 AK316224 NM_001178075 NM_001178076 NM_001673 NM_183356	53086	-	NM_003182|TAC1|6863|tachykinin, precursor 1##NM_013996|TAC1|6863|tachykinin, precursor 1##NM_013997|TAC1|6863|tachykinin, precursor 1##NM_013998|TAC1|6863|tachykinin, precursor 1##U37529|TAC1|6863|tachykinin, precursor 1##AK222957|TAC1|6863|tachykinin, precursor 1##BC018047|TAC1|6863|tachykinin, precursor 1##X54469|TAC1|6863|tachykinin, precursor 1##BC022858|ACN9|57001|ACN9 homolog (S. cerevisiae)##AF201933|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC020621|ACN9|57001|ACN9 homolog (S. cerevisiae)##BC028409|ACN9|57001|ACN9 homolog (S. cerevisiae)##NM_020186|ACN9|57001|ACN9 homolog (S. cerevisiae)##AK302242|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK000379|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178077|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_133436|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC008723|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##BC014621|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK302189|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##M27396|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##AK316224|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178075|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001178076|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_001673|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)##NM_183356|ASNS|440|asparagine synthetase (glutamine-hydrolyzing)	0.157339	
chr8	123982448	123982615	reg1037793.p1	3.457	+	TSC_hg19_v1_chr8_+_123963651 EU446694 AB083653	-18832	+	TSC_hg19_v1_chr8_+_123794108 AB020661	-188428	+	BC042145 TSC_hg19_v1_chr8_+_123794000	-188537	+	BC002457 TSC_hg19_v1_chr8_-_124054522	71976	-	AY358818 TSC_hg19_v1_chr8_-_124054540 AK303826	72009	-	TSC_hg19_v1_chr8_-_124054594 NM_001134671 NM_024295	72088	-	EU446694|ZHX2|22882|zinc fingers and homeoboxes 2##AB083653|ZHX2|22882|zinc fingers and homeoboxes 2##AB020661|ZHX2|22882|zinc fingers and homeoboxes 2##BC042145|ZHX2|22882|zinc fingers and homeoboxes 2##BC002457|DERL1|79139|Der1-like domain family, member 1##AY358818|DERL1|79139|Der1-like domain family, member 1##AK303826|DERL1|79139|Der1-like domain family, member 1##NM_001134671|DERL1|79139|Der1-like domain family, member 1##NM_024295|DERL1|79139|Der1-like domain family, member 1	0.0	
chr8	135844654	135844739	reg1032940.p1	3.457	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-119422	-	TSC_hg19_v1_chr8_-_135725053 AB463359	-119617	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	-135902	-	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	624962	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	625505	+	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	3664410	-	BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B	0.0	
chr9	9606804	9606934	reg1012579.p2	3.457	+	TSC_hg19_v1_chr9_+_8858136 AK094342	-748736	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-872950	-	TSC_hg19_v1_chr9_+_8713275 AY779046	-893577	+	BC028038 NM_002839	1005853	-	NM_000550 X51420 BC052608	3086556	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	3168147	+	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##AY779046|RPL18A|6142|ribosomal protein L18a##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150	0.0	
chr12	12045052	12045185	reg1043458.p1	3.456	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-242132	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-242344	+	TSC_hg19_v1_chr12_+_11802659 AK289441	-242445	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	178765	+	AF281254 AF281255 NM_030766 NM_138722	179283	+	AK074543 TSC_hg19_v1_chr12_-_12291395	246266	-	U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AK289441|ETV6|2120|ets variant 6##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6	0.026732	
chr12	22867054	22867166	reg1041853.p1	3.456	+	TSC_hg19_v1_chr12_+_22778130 CU688188 BC006111 AL137750 AK074425	-88963	+	AF207600 TSC_hg19_v1_chr12_+_22778077 BC066907 NM_001039481 NM_018638	-89067	+	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	-169644	-	NM_178010 AK098610 AK223536	870416	-	AK074317 TSC_hg19_v1_chr12_-_24102605 BC065532 AB081589 NM_006940	1235492	-	TSC_hg19_v1_chr12_-_24103855 AK299607 AK096569	1236744	-	BC006111|ETNK1|55500|ethanolamine kinase 1##AL137750|ETNK1|55500|ethanolamine kinase 1##AK074425|ETNK1|55500|ethanolamine kinase 1##AF207600|ETNK1|55500|ethanolamine kinase 1##BC066907|ETNK1|55500|ethanolamine kinase 1##NM_001039481|ETNK1|55500|ethanolamine kinase 1##NM_018638|ETNK1|55500|ethanolamine kinase 1##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528##NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5##AK098610|SOX5|6660|SRY (sex determining region Y)-box 5##AK223536|SOX5|6660|SRY (sex determining region Y)-box 5##AK074317|SOX5|6660|SRY (sex determining region Y)-box 5##BC065532|SOX5|6660|SRY (sex determining region Y)-box 5##AB081589|SOX5|6660|SRY (sex determining region Y)-box 5##NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5##AK299607|SOX5|6660|SRY (sex determining region Y)-box 5##AK096569|SOX5|6660|SRY (sex determining region Y)-box 5	0.03259	
chr12	48161166	48161293	reg1005036.p2	3.456	+	AK092448 NM_001098531	-8355	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	-8820	-	AK314688 BC069715 BC069698 BC074763 AX772808 AK300169 AK075446 BC111782 M32402 M36109 NM_001172439 NM_001172440 NM_006025	-41940	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	5805	+	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	52435	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	137572	-	AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK314688|ENDOU|8909|endonuclease, polyU-specific##BC069715|ENDOU|8909|endonuclease, polyU-specific##BC069698|ENDOU|8909|endonuclease, polyU-specific##BC074763|ENDOU|8909|endonuclease, polyU-specific##AX772808|ENDOU|8909|endonuclease, polyU-specific##AK300169|ENDOU|8909|endonuclease, polyU-specific##AK075446|ENDOU|8909|endonuclease, polyU-specific##BC111782|ENDOU|8909|endonuclease, polyU-specific##M32402|ENDOU|8909|endonuclease, polyU-specific##M36109|ENDOU|8909|endonuclease, polyU-specific##NM_001172439|ENDOU|8909|endonuclease, polyU-specific##NM_001172440|ENDOU|8909|endonuclease, polyU-specific##NM_006025|ENDOU|8909|endonuclease, polyU-specific##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor	0.0	
chr12	62997016	62997139	reg1036105.p3	3.456	+	AK022671 TSC_hg19_v1_chr12_+_62954346	-42766	+	BC042679 AB017814 AB384555 TSC_hg19_v1_chr12_+_62861012	-136162	+	TSC_hg19_v1_chr12_+_62860601 NM_015026 BX537415 AL833066 AK123842 BC065289 BC111488 BC136621 BC144309 BC144324 AB028963 BC141817 BC142710 BC151241	-136498	+	BC136288 AK098456 NM_175895	133	-	TSC_hg19_v1_chr12_-_63328666 NM_020700 BC157843	331628	-	TSC_hg19_v1_chr12_-_63328931 BC040177 AK024134 AB084258 AK023315	331848	-	AK022671|MON2|23041|MON2 homolog (S. cerevisiae)##AB017814|MON2|23041|MON2 homolog (S. cerevisiae)##NM_015026|MON2|23041|MON2 homolog (S. cerevisiae)##BX537415|MON2|23041|MON2 homolog (S. cerevisiae)##AL833066|MON2|23041|MON2 homolog (S. cerevisiae)##AK123842|MON2|23041|MON2 homolog (S. cerevisiae)##BC065289|MON2|23041|MON2 homolog (S. cerevisiae)##BC136621|MON2|23041|MON2 homolog (S. cerevisiae)##BC144309|MON2|23041|MON2 homolog (S. cerevisiae)##BC144324|MON2|23041|MON2 homolog (S. cerevisiae)##AB028963|MON2|23041|MON2 homolog (S. cerevisiae)##BC141817|MON2|23041|MON2 homolog (S. cerevisiae)##BC142710|MON2|23041|MON2 homolog (S. cerevisiae)##BC151241|MON2|23041|MON2 homolog (S. cerevisiae)##BC136288|C12orf61|283416|chromosome 12 open reading frame 61##AK098456|C12orf61|283416|chromosome 12 open reading frame 61##NM_175895|C12orf61|283416|chromosome 12 open reading frame 61##NM_020700|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC157843|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##BC040177|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AB084258|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H##AK023315|PPM1H|57460|protein phosphatase, Mg2+/Mn2+ dependent, 1H	0.210608	CTCF.p2:-7:0.211
chr13	49107243	49107326	reg1033319.p2	3.456	+	TSC_hg19_v1_chr13_-_49107219 AK310081	-62	-	TSC_hg19_v1_chr13_-_49107217 BC029052 AK298438 AK301516 AK304598	-83	-	TSC_hg19_v1_chr13_+_49050586 AK307125	-56694	+	TSC_hg19_v1_chr13_-_49107313 AK315703 NM_001268	5	-	AB209543 TSC_hg19_v1_chr13_-_49107365	80	-	AK122778 TSC_hg19_v1_chr13_-_49110119	2834	-	AK310081|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##BC029052|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK298438|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK301516|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK304598|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK307125|RB1|5925|retinoblastoma 1##AK315703|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##NM_001268|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AB209543|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2##AK122778|RCBTB2|1102|regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	0.0	
chr17	4981391	4981517	reg1040468.p1	3.456	+	AB362534 AK023570 AB362533 BC060810 NM_001104577 NM_017986	-42742	-	TSC_hg19_v1_chr17_+_4901226 NM_006612 AB014606 BC034993 AK307401	-80144	+	AY601906 AY601907 NM_001167985 NM_001167986 NM_001167987 NM_213726	-80550	-	TSC_hg19_v1_chr17_+_4981751 AK055288 NM_153018	283	+	TSC_hg19_v1_chr17_+_4981774 AK290549 BC142962 BX647638	331	+	NM_014519 AK316369 TSC_hg19_v1_chr17_-_5026412	44950	-	AB362534|GPR172B|55065|G protein-coupled receptor 172B##AK023570|GPR172B|55065|G protein-coupled receptor 172B##AB362533|GPR172B|55065|G protein-coupled receptor 172B##BC060810|GPR172B|55065|G protein-coupled receptor 172B##NM_001104577|GPR172B|55065|G protein-coupled receptor 172B##NM_017986|GPR172B|55065|G protein-coupled receptor 172B##NM_006612|KIF1C|10749|kinesin family member 1C##AB014606|KIF1C|10749|kinesin family member 1C##BC034993|KIF1C|10749|kinesin family member 1C##AK307401|KIF1C|10749|kinesin family member 1C##AY601906|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##AY601907|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167985|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167986|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_001167987|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##NM_213726|INCA1|388324|inhibitor of CDK, cyclin A1 interacting protein 1##AK055288|ZFP3|124961|zinc finger protein 3 homolog (mouse)##NM_153018|ZFP3|124961|zinc finger protein 3 homolog (mouse)##AK290549|ZFP3|124961|zinc finger protein 3 homolog (mouse)##BC142962|ZFP3|124961|zinc finger protein 3 homolog (mouse)##BX647638|ZFP3|124961|zinc finger protein 3 homolog (mouse)##NM_014519|ZNF232|7775|zinc finger protein 232##AK316369|ZNF232|7775|zinc finger protein 232	0.0	
chr17	57427897	57427964	reg1034061.p2	3.456	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	-18912	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	-130032	+	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	-140533	+	AF461690 NM_001166301 NM_024612 TSC_hg19_v1_chr17_+_57642970 BC024187 AK299151 AK095681 AF260270 AK226048 AB384723 DQ890909 DQ894060	215057	+	TSC_hg19_v1_chr17_+_57697037 NM_004859	269115	+	TSC_hg19_v1_chr17_+_57697265 BC054489 BX640615	269340	+	NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)##NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_004859|CLTC|1213|clathrin, heavy chain (Hc)##BC054489|CLTC|1213|clathrin, heavy chain (Hc)##BX640615|CLTC|1213|clathrin, heavy chain (Hc)	0.0	
chr18	65928547	65928672	reg1035280.p2	3.456	+	TSC_hg19_v1_chr18_-_65183956 NM_032160	-744663	-	AK021849 TSC_hg19_v1_chr18_-_65182656	-746026	-	AJ007607 NM_021153 AK304000 AK315257 BC015877	-1657298	-	AM393206 AM393295 CU689334 TSC_hg19_v1_chr18_-_66382307 AK307269 AK295551 BC032325 AL832341 AL832356 BC093792 BC093794 BC143400 AB058733	453657	-	TSC_hg19_v1_chr18_-_66382346 AK122715 BC107422 NM_019022 BX647846 AK310389	453827	-	NM_001093729 AK308114 AK091108	453910	+	NM_032160|DSEL|92126|dermatan sulfate epimerase-like##AK021849|DSEL|92126|dermatan sulfate epimerase-like##AJ007607|CDH19|28513|cadherin 19, type 2##NM_021153|CDH19|28513|cadherin 19, type 2##AK304000|CDH19|28513|cadherin 19, type 2##AK315257|CDH19|28513|cadherin 19, type 2##BC015877|CDH19|28513|cadherin 19, type 2##AM393206|TMX3|54495|thioredoxin-related transmembrane protein 3##AM393295|TMX3|54495|thioredoxin-related transmembrane protein 3##AK307269|TMX3|54495|thioredoxin-related transmembrane protein 3##AK295551|TMX3|54495|thioredoxin-related transmembrane protein 3##BC032325|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832341|TMX3|54495|thioredoxin-related transmembrane protein 3##AL832356|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093792|TMX3|54495|thioredoxin-related transmembrane protein 3##BC093794|TMX3|54495|thioredoxin-related transmembrane protein 3##BC143400|TMX3|54495|thioredoxin-related transmembrane protein 3##AB058733|TMX3|54495|thioredoxin-related transmembrane protein 3##AK122715|TMX3|54495|thioredoxin-related transmembrane protein 3##BC107422|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_019022|TMX3|54495|thioredoxin-related transmembrane protein 3##BX647846|TMX3|54495|thioredoxin-related transmembrane protein 3##AK310389|TMX3|54495|thioredoxin-related transmembrane protein 3##NM_001093729|CCDC102B|79839|coiled-coil domain containing 102B##AK308114|CCDC102B|79839|coiled-coil domain containing 102B##AK091108|CCDC102B|79839|coiled-coil domain containing 102B	0.0	
chr19	17890178	17890250	reg1044512.p1	3.456	+	NM_001161359 NM_015122 TSC_hg19_v1_chr19_+_17862326 AK316458 BC041130	-27898	+	TSC_hg19_v1_chr19_+_17858564 NM_001161357 NM_001161358 AK291410 BC028021	-31663	+	DQ387861 NM_018174 AL834233 BC067115 TSC_hg19_v1_chr19_+_17830310 BC080547 AJ440784 AK027623 BC113952 AK308975	-59905	+	TSC_hg19_v1_chr19_+_17905918 NM_014256	15702	+	TSC_hg19_v1_chr19_+_17905971 AK075466 AK314323 AK075434 AB015630 AK225421 AB049585 AY358955 BC066876 BC067423 AK225478	15745	+	BC032810 BC040435 BC053345 BC061886 BC106721 BC071706 BC106722 NM_005543 S72482 AK302780 AY082014	42133	-	NM_001161359|FCHO1|23149|FCH domain only 1##NM_015122|FCHO1|23149|FCH domain only 1##AK316458|FCHO1|23149|FCH domain only 1##BC041130|FCHO1|23149|FCH domain only 1##NM_001161357|FCHO1|23149|FCH domain only 1##NM_001161358|FCHO1|23149|FCH domain only 1##AK291410|FCHO1|23149|FCH domain only 1##BC028021|FCHO1|23149|FCH domain only 1##DQ387861|MAP1S|55201|microtubule-associated protein 1S##NM_018174|MAP1S|55201|microtubule-associated protein 1S##AL834233|MAP1S|55201|microtubule-associated protein 1S##BC067115|MAP1S|55201|microtubule-associated protein 1S##BC080547|MAP1S|55201|microtubule-associated protein 1S##AJ440784|MAP1S|55201|microtubule-associated protein 1S##AK027623|MAP1S|55201|microtubule-associated protein 1S##BC113952|MAP1S|55201|microtubule-associated protein 1S##AK308975|MAP1S|55201|microtubule-associated protein 1S##NM_014256|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK075466|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK314323|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK075434|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AB015630|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK225421|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AB049585|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AY358955|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC066876|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC067423|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##AK225478|B3GNT3|10331|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3##BC032810|INSL3|3640|insulin-like 3 (Leydig cell)##BC040435|INSL3|3640|insulin-like 3 (Leydig cell)##BC053345|INSL3|3640|insulin-like 3 (Leydig cell)##BC061886|INSL3|3640|insulin-like 3 (Leydig cell)##BC106721|INSL3|3640|insulin-like 3 (Leydig cell)##BC071706|INSL3|3640|insulin-like 3 (Leydig cell)##BC106722|INSL3|3640|insulin-like 3 (Leydig cell)##NM_005543|INSL3|3640|insulin-like 3 (Leydig cell)##S72482|INSL3|3640|insulin-like 3 (Leydig cell)##AK302780|INSL3|3640|insulin-like 3 (Leydig cell)##AY082014|INSL3|3640|insulin-like 3 (Leydig cell)	0.0	
chr2	222420021	222420184	reg1038372.p1	3.456	+	AY142112 NM_005070 NM_201574 AK314083 AK309025 AK289974 AK226122 BC146656	-1927748	+	TSC_hg19_v1_chr2_+_220462589 AK295609 AK300611 AK296632 AK299894 BC034051 NM_052902 AF450267	-1957513	+	M13981 NM_002191 BC039076 BC006391 TSC_hg19_v1_chr2_+_220437031 BT006954 CU675381 DQ890602 DQ893773 M13144	-1983056	+	BC036860 BC026327 L36645 BC105000 BC105002 NM_004438 AK300772 TSC_hg19_v1_chr2_-_222437025 AK225181 AK312380	16908	-	L07483 U02309 TSC_hg19_v1_chr2_-_223159109	738918	-	AK057009 NM_153038 BC109388	742810	+	AY142112|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_005070|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##NM_201574|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK314083|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK309025|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK289974|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK226122|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##BC146656|SLC4A3|6508|solute carrier family 4, anion exchanger, member 3##AK295609|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK300611|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK296632|STK11IP|114790|serine/threonine kinase 11 interacting protein##AK299894|STK11IP|114790|serine/threonine kinase 11 interacting protein##BC034051|STK11IP|114790|serine/threonine kinase 11 interacting protein##NM_052902|STK11IP|114790|serine/threonine kinase 11 interacting protein##AF450267|STK11IP|114790|serine/threonine kinase 11 interacting protein##M13981|INHA|3623|inhibin, alpha##NM_002191|INHA|3623|inhibin, alpha##BC039076|INHA|3623|inhibin, alpha##BC006391|INHA|3623|inhibin, alpha##BT006954|INHA|3623|inhibin, alpha##DQ890602|INHA|3623|inhibin, alpha##DQ893773|INHA|3623|inhibin, alpha##M13144|INHA|3623|inhibin, alpha##BC026327|EPHA4|2043|EPH receptor A4##L36645|EPHA4|2043|EPH receptor A4##BC105000|EPHA4|2043|EPH receptor A4##BC105002|EPHA4|2043|EPH receptor A4##NM_004438|EPHA4|2043|EPH receptor A4##AK300772|EPHA4|2043|EPH receptor A4##AK225181|EPHA4|2043|EPH receptor A4##AK312380|EPHA4|2043|EPH receptor A4##L07483|PAX3|5077|paired box 3##U02309|PAX3|5077|paired box 3##AK057009|CCDC140|151278|coiled-coil domain containing 140##NM_153038|CCDC140|151278|coiled-coil domain containing 140##BC109388|CCDC140|151278|coiled-coil domain containing 140	0.0	
chr5	9658831	9658941	reg1035297.p1	3.456	+	BC095521 NM_019599	-28424	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	-112692	-	TSC_hg19_v1_chr5_+_7869306 BC062577	-1789576	+	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	591098	-	AK300042 TSC_hg19_v1_chr5_-_10250001 AK316317 AK055604 AK302012 NM_199133	591119	-	NM_012073 AK302368 TSC_hg19_v1_chr5_+_10250368	591439	+	BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC063406|FAM173B|134145|family with sequence similarity 173, member B##AK300042|FAM173B|134145|family with sequence similarity 173, member B##AK316317|FAM173B|134145|family with sequence similarity 173, member B##AK055604|FAM173B|134145|family with sequence similarity 173, member B##AK302012|FAM173B|134145|family with sequence similarity 173, member B##NM_199133|FAM173B|134145|family with sequence similarity 173, member B##NM_012073|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK302368|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)	0.0	
chr9	134497269	134497342	reg1039334.p1	3.456	+	AK057848 TSC_hg19_v1_chr9_-_134406625 BC091495 BC015547 AK022317 NM_001135954 NM_031432	-90655	-	TSC_hg19_v1_chr9_-_134406578 AF254133 CR457281 CU677347 AF237290 AF125106 AK295471 AK307475	-90758	-	AK315218 TSC_hg19_v1_chr9_+_134378402 AK293529 BC022877	-118870	+	BC041710 NM_198679 TSC_hg19_v1_chr9_-_134585264	87897	-	D21239 NM_005312	115619	-	AB385202 EU832841 GQ129245 CR749354 TSC_hg19_v1_chr9_-_134615363	117985	-	AK057848|UCK1|83549|uridine-cytidine kinase 1##BC091495|UCK1|83549|uridine-cytidine kinase 1##BC015547|UCK1|83549|uridine-cytidine kinase 1##AK022317|UCK1|83549|uridine-cytidine kinase 1##NM_001135954|UCK1|83549|uridine-cytidine kinase 1##NM_031432|UCK1|83549|uridine-cytidine kinase 1##AF254133|UCK1|83549|uridine-cytidine kinase 1##CR457281|UCK1|83549|uridine-cytidine kinase 1##AF237290|UCK1|83549|uridine-cytidine kinase 1##AF125106|UCK1|83549|uridine-cytidine kinase 1##AK295471|UCK1|83549|uridine-cytidine kinase 1##AK307475|UCK1|83549|uridine-cytidine kinase 1##AK315218|POMT1|10585|protein-O-mannosyltransferase 1##AK293529|POMT1|10585|protein-O-mannosyltransferase 1##BC022877|POMT1|10585|protein-O-mannosyltransferase 1##BC041710|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_198679|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##D21239|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##NM_005312|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##EU832841|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##GQ129245|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1##CR749354|RAPGEF1|2889|Rap guanine nucleotide exchange factor (GEF) 1	0.0	
chr9	137295911	137296012	reg1040691.p1	3.456	+	TSC_hg19_v1_chr9_+_137218326 BC110998 X52773 AB463220 EU446653 AB307705 HQ692843	-77561	+	TSC_hg19_v1_chr9_+_137218317 BC063827 NM_002957	-77646	+	AJ011376 NM_052821 AB464354	-291007	+	TSC_hg19_v1_chr9_+_137533652 AB371583 NM_000093	237686	+	TSC_hg19_v1_chr9_+_137533714 M76729 D90279	237849	+	AK290843 BC069572 BC069825 BC113935 D49353 NM_004108 NM_015837 AK308476 AB590757	476699	+	BC110998|RXRA|6256|retinoid X receptor, alpha##X52773|RXRA|6256|retinoid X receptor, alpha##EU446653|RXRA|6256|retinoid X receptor, alpha##AB307705|RXRA|6256|retinoid X receptor, alpha##HQ692843|RXRA|6256|retinoid X receptor, alpha##BC063827|RXRA|6256|retinoid X receptor, alpha##NM_002957|RXRA|6256|retinoid X receptor, alpha##AJ011376|WDR5|11091|WD repeat domain 5##NM_052821|WDR5|11091|WD repeat domain 5##AB371583|COL5A1|1289|collagen, type V, alpha 1##NM_000093|COL5A1|1289|collagen, type V, alpha 1##D90279|COL5A1|1289|collagen, type V, alpha 1##AK290843|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069572|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC069825|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##BC113935|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##D49353|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_004108|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##NM_015837|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)##AK308476|FCN2|2220|ficolin (collagen/fibrinogen domain containing lectin) 2 (hucolin)	0.0	
chr10	14865033	14865191	reg1002430.p1	3.455	+	AK127413 NM_031453	-48217	-	TSC_hg19_v1_chr10_-_14646423 BC072452	-218683	-	TSC_hg19_v1_chr10_-_14646259 BC064407	-218795	-	TSC_hg19_v1_chr10_-_14880025 BC133042 BC133044 BC144619 NM_001029954 AK301259	14910	-	TSC_hg19_v1_chr10_+_14880314 BC108738 NM_016299 AK225265 AK225651 AK302452 AK000880 BC065281 BC038845	15123	+	TSC_hg19_v1_chr10_+_14880335 AF112210 BC119690 BC119691	15226	+	AK127413|FAM107B|83641|family with sequence similarity 107, member B##NM_031453|FAM107B|83641|family with sequence similarity 107, member B##BC072452|FAM107B|83641|family with sequence similarity 107, member B##BC064407|FAM107B|83641|family with sequence similarity 107, member B##BC133042|CDNF|441549|cerebral dopamine neurotrophic factor##BC133044|CDNF|441549|cerebral dopamine neurotrophic factor##BC144619|CDNF|441549|cerebral dopamine neurotrophic factor##NM_001029954|CDNF|441549|cerebral dopamine neurotrophic factor##BC108738|HSPA14|51182|heat shock 70kDa protein 14##NM_016299|HSPA14|51182|heat shock 70kDa protein 14##AK225265|HSPA14|51182|heat shock 70kDa protein 14##AK225651|HSPA14|51182|heat shock 70kDa protein 14##AK302452|HSPA14|51182|heat shock 70kDa protein 14##AK000880|HSPA14|51182|heat shock 70kDa protein 14##BC065281|HSPA14|51182|heat shock 70kDa protein 14##BC038845|HSPA14|51182|heat shock 70kDa protein 14##AF112210|HSPA14|51182|heat shock 70kDa protein 14##BC119690|HSPA14|51182|heat shock 70kDa protein 14##BC119691|HSPA14|51182|heat shock 70kDa protein 14	0.0	
chr12	11989808	11989874	reg1034501.p2	3.455	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-186855	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-187067	+	TSC_hg19_v1_chr12_+_11802659 AK289441	-187168	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	234042	+	AF281254 AF281255 NM_030766 NM_138722	234560	+	AK074543 TSC_hg19_v1_chr12_-_12291395	301543	-	U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AK289441|ETV6|2120|ets variant 6##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6	0.0	
chr15	31528184	31528307	reg1034931.p1	3.455	+	NM_001243538	-5196	-	GQ502181 HM135791 NM_001252020	-74817	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-134328	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	91093	+	AJ430383 NM_130901	419296	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	634584	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.0	
chr16	15982616	15982683	reg1034331.p2	3.455	+	AL832498 TSC_hg19_v1_chr16_-_15982471	-164	-	AK055715 NM_144600 TSC_hg19_v1_chr16_-_15982448 BC022321 AK056798 AY507846	-196	-	BC101677 BC104906 BC143364 AB020673 AY520816 AY520817 TSC_hg19_v1_chr16_-_15950886 AK308389 BC031040 EU489063 NM_001040113 NM_001040114 NM_002474 NM_022844	-31780	-	TSC_hg19_v1_chr16_+_16043442 L05628 NM_004996 NM_019862 NM_019898 NM_019899 NM_019900 X78338	60715	+	TSC_hg19_v1_chr16_+_16146613 HQ917065	163969	+	AF168791 AM711638 AM774324 BC050733 AF076622 BC131732 U66689 NM_001079528 NM_001171 AY078405 AK298295	334671	-	AL832498|FOPNL|123811|FGFR1OP N-terminal like##AK055715|FOPNL|123811|FGFR1OP N-terminal like##NM_144600|FOPNL|123811|FGFR1OP N-terminal like##BC022321|FOPNL|123811|FGFR1OP N-terminal like##AK056798|FOPNL|123811|FGFR1OP N-terminal like##AY507846|FOPNL|123811|FGFR1OP N-terminal like##BC101677|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC104906|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC143364|MYH11|4629|myosin, heavy chain 11, smooth muscle##AB020673|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520816|MYH11|4629|myosin, heavy chain 11, smooth muscle##AY520817|MYH11|4629|myosin, heavy chain 11, smooth muscle##AK308389|MYH11|4629|myosin, heavy chain 11, smooth muscle##BC031040|MYH11|4629|myosin, heavy chain 11, smooth muscle##EU489063|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040113|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_001040114|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_002474|MYH11|4629|myosin, heavy chain 11, smooth muscle##NM_022844|MYH11|4629|myosin, heavy chain 11, smooth muscle##L05628|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_004996|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019862|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019898|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019899|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##NM_019900|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##X78338|ABCC1|4363|ATP-binding cassette, sub-family C (CFTR/MRP), member 1##AF168791|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM711638|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AM774324|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC050733|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AF076622|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##BC131732|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001079528|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##NM_001171|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AY078405|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6##AK298295|ABCC6|368|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	0.0	
chr16	50155817	50155913	reg1035458.p2	3.455	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	-55905	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	-55972	+	TSC_hg19_v1_chr16_+_50059172 AK095420 AK301610 BC022550 CR933600 AK307309 BC036683 FJ516381 NM_153261	-96725	+	TSC_hg19_v1_chr16_+_50186838 AK300918 NM_001040284 NM_001040285	30970	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	144611	+	TSC_hg19_v1_chr16_+_50308041 BC039891	152188	+	AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK095420|TMEM188|255919|transmembrane protein 188##AK301610|TMEM188|255919|transmembrane protein 188##BC022550|TMEM188|255919|transmembrane protein 188##CR933600|TMEM188|255919|transmembrane protein 188##AK307309|TMEM188|255919|transmembrane protein 188##BC036683|TMEM188|255919|transmembrane protein 188##FJ516381|TMEM188|255919|transmembrane protein 188##NM_153261|TMEM188|255919|transmembrane protein 188##AK300918|PAPD5|64282|PAP associated domain containing 5##NM_001040284|PAPD5|64282|PAP associated domain containing 5##NM_001040285|PAPD5|64282|PAP associated domain containing 5##AK093706|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7	0.0	
chr18	39671692	39671791	reg1041715.p2	3.455	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	-136508	+	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	-136542	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-2291473	-	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	1023828	-	AB385452 EU176218 AK299652 AF299075 AK299593 AK297275 BC036538 AB037763 AK291154 AK293791 AK297379 AK311335 AK311469 NM_020783	1185688	-	TSC_hg19_v1_chr18_+_42260124 BC062338 NM_001130110	2588373	+	BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK090603|LOC647946|647946|uncharacterized LOC647946##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2##EU176218|SYT4|6860|synaptotagmin IV##AK299652|SYT4|6860|synaptotagmin IV##AF299075|SYT4|6860|synaptotagmin IV##AK299593|SYT4|6860|synaptotagmin IV##AK297275|SYT4|6860|synaptotagmin IV##BC036538|SYT4|6860|synaptotagmin IV##AB037763|SYT4|6860|synaptotagmin IV##AK291154|SYT4|6860|synaptotagmin IV##AK293791|SYT4|6860|synaptotagmin IV##AK297379|SYT4|6860|synaptotagmin IV##AK311335|SYT4|6860|synaptotagmin IV##NM_020783|SYT4|6860|synaptotagmin IV##BC062338|SETBP1|26040|SET binding protein 1##NM_001130110|SETBP1|26040|SET binding protein 1	0.0	
chr2	134852499	134852625	reg1041679.p1	3.455	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-526524	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-673208	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-1312868	-	NM_002410 D17716 AF113921	159323	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	623994	-	AK125008 NM_138326 BC016018 BC107420 AB071418	743656	+	AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	0.358632	CTCF.p2:5:0.359
chr2	21116481	21116579	reg1041316.p1	3.455	+	TSC_hg19_v1_chr2_-_21022845 AK025473 NM_021925 AK299244 AK300494 BC017473 AK316162 AK299555 AK301493 AK316204 AK316310	-93677	-	AF522369 NM_182828	-250107	+	TSC_hg19_v1_chr2_-_20850859 AB527583 CU691206 CU693338 BC057389 BC038847 BC050636 BC027947 AK024311 AK314383 NM_022460	-265682	-	M36676 TSC_hg19_v1_chr2_-_21225654 M31030	109163	-	TSC_hg19_v1_chr2_-_21228195 X03325	111718	-	X03045 TSC_hg19_v1_chr2_-_21230697	114107	-	AK025473|C2orf43|60526|chromosome 2 open reading frame 43##NM_021925|C2orf43|60526|chromosome 2 open reading frame 43##AK299244|C2orf43|60526|chromosome 2 open reading frame 43##AK300494|C2orf43|60526|chromosome 2 open reading frame 43##BC017473|C2orf43|60526|chromosome 2 open reading frame 43##AK316162|C2orf43|60526|chromosome 2 open reading frame 43##AK299555|C2orf43|60526|chromosome 2 open reading frame 43##AK301493|C2orf43|60526|chromosome 2 open reading frame 43##AK316204|C2orf43|60526|chromosome 2 open reading frame 43##AK316310|C2orf43|60526|chromosome 2 open reading frame 43##AF522369|GDF7|151449|growth differentiation factor 7##NM_182828|GDF7|151449|growth differentiation factor 7##BC057389|HS1BP3|64342|HCLS1 binding protein 3##BC038847|HS1BP3|64342|HCLS1 binding protein 3##BC050636|HS1BP3|64342|HCLS1 binding protein 3##BC027947|HS1BP3|64342|HCLS1 binding protein 3##AK024311|HS1BP3|64342|HCLS1 binding protein 3##AK314383|HS1BP3|64342|HCLS1 binding protein 3##NM_022460|HS1BP3|64342|HCLS1 binding protein 3##M36676|APOB|338|apolipoprotein B (including Ag(x) antigen)##M31030|APOB|338|apolipoprotein B (including Ag(x) antigen)##X03325|APOB|338|apolipoprotein B (including Ag(x) antigen)##X03045|APOB|338|apolipoprotein B (including Ag(x) antigen)	0.165984	
chr2	86422658	86422725	reg1036555.p2	3.455	+	TSC_hg19_v1_chr2_-_86422614 BX537369 L42572	-36	-	AB527791 CR456793 CU677950 EU831472 EU831559 TSC_hg19_v1_chr2_-_86422566 AY232292 AK300017 BC002412 AK296676 AY921637 AK312251 AK299014 AK309004 AK225780 AK304197 BC005983 BC107419 D21091 D21094	-144	-	NM_017952 TSC_hg19_v1_chr2_+_86333357 AK293962 BC011832 AB528740	-89350	+	NM_001100169 NM_001100170 NM_006839	201	-	NM_016622 NM_145644 TSC_hg19_v1_chr2_+_86426604 BC020651 AK074352 AK314555 AK314577 AF208849 AL832982 CU676602	3893	+	AY562239 CR457301 CU687956 AK297201 TSC_hg19_v1_chr2_-_86564750 BC064846 AK294300 AK297359 AK297373 AK299334 AK023172 NM_001164731 NM_001164732 NM_022912	142042	-	BX537369|IMMT|10989|inner membrane protein, mitochondrial##L42572|IMMT|10989|inner membrane protein, mitochondrial##CR456793|IMMT|10989|inner membrane protein, mitochondrial##EU831472|IMMT|10989|inner membrane protein, mitochondrial##EU831559|IMMT|10989|inner membrane protein, mitochondrial##AY232292|IMMT|10989|inner membrane protein, mitochondrial##AK300017|IMMT|10989|inner membrane protein, mitochondrial##BC002412|IMMT|10989|inner membrane protein, mitochondrial##AK296676|IMMT|10989|inner membrane protein, mitochondrial##AY921637|IMMT|10989|inner membrane protein, mitochondrial##AK312251|IMMT|10989|inner membrane protein, mitochondrial##AK299014|IMMT|10989|inner membrane protein, mitochondrial##AK309004|IMMT|10989|inner membrane protein, mitochondrial##AK225780|IMMT|10989|inner membrane protein, mitochondrial##AK304197|IMMT|10989|inner membrane protein, mitochondrial##BC005983|IMMT|10989|inner membrane protein, mitochondrial##BC107419|IMMT|10989|inner membrane protein, mitochondrial##D21091|IMMT|10989|inner membrane protein, mitochondrial##D21094|IMMT|10989|inner membrane protein, mitochondrial##NM_017952|PTCD3|55037|Pentatricopeptide repeat domain 3##AK293962|PTCD3|55037|Pentatricopeptide repeat domain 3##BC011832|PTCD3|55037|Pentatricopeptide repeat domain 3##NM_001100169|IMMT|10989|inner membrane protein, mitochondrial##NM_001100170|IMMT|10989|inner membrane protein, mitochondrial##NM_006839|IMMT|10989|inner membrane protein, mitochondrial##NM_016622|MRPL35|51318|mitochondrial ribosomal protein L35##NM_145644|MRPL35|51318|mitochondrial ribosomal protein L35##BC020651|MRPL35|51318|mitochondrial ribosomal protein L35##AK074352|MRPL35|51318|mitochondrial ribosomal protein L35##AK314555|MRPL35|51318|mitochondrial ribosomal protein L35##AK314577|MRPL35|51318|mitochondrial ribosomal protein L35##AF208849|MRPL35|51318|mitochondrial ribosomal protein L35##AL832982|MRPL35|51318|mitochondrial ribosomal protein L35##AY562239|REEP1|65055|receptor accessory protein 1##CR457301|REEP1|65055|receptor accessory protein 1##AK297201|REEP1|65055|receptor accessory protein 1##BC064846|REEP1|65055|receptor accessory protein 1##AK294300|REEP1|65055|receptor accessory protein 1##AK297359|REEP1|65055|receptor accessory protein 1##AK297373|REEP1|65055|receptor accessory protein 1##AK299334|REEP1|65055|receptor accessory protein 1##AK023172|REEP1|65055|receptor accessory protein 1##NM_001164731|REEP1|65055|receptor accessory protein 1##NM_001164732|REEP1|65055|receptor accessory protein 1##NM_022912|REEP1|65055|receptor accessory protein 1	0.0	
chr3	156382863	156382948	reg1038032.p2	3.455	+	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	-109962	-	TSC_hg19_v1_chr3_-_156272894 BT006669 DQ892572 DQ895788 AK304364 AK312935	-110024	-	NM_172159 BC043166 AK127240	-374095	+	NM_015508	9299	+	AK291261 TSC_hg19_v1_chr3_+_156392402 BX537965 BC050350	9497	+	CR749647 NM_001184717	9809	+	AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BT006669|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ892572|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##DQ895788|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK304364|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AK312935|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_172159|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##BC043166|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##AK127240|KCNAB1|7881|potassium voltage-gated channel, shaker-related subfamily, beta member 1##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##CR749647|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184717|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	0.0	
chr4	131257884	131258015	reg1032152.p2	3.455	+	NM_001099783	-1240668	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-1243082	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-1243359	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	2812507	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	2815334	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	3864969	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.0	
chr4	1750403	1750494	reg1006033.p1	3.455	+	TSC_hg19_v1_chr4_+_1723248 AK302463 AK225631 BC106071 AF093543 AF479620 AJ243997 BC111771	-27180	+	TSC_hg19_v1_chr4_+_1723215 NM_006342	-27231	+	TSC_hg19_v1_chr4_-_1722981 BC126370 BC009331 BC018921 NM_001127266 NM_138385	-27417	-	TSC_hg19_v1_chr4_+_1795019 AB209441 NM_000142 NM_001163213 NM_022965	44578	+	DQ893606 AK293572 TSC_hg19_v1_chr4_-_1857827 BC014500 BC021208 AF061025 NM_012318	107383	-	AK289697 TSC_hg19_v1_chr4_+_1873132 NM_001042424	122636	+	AK302463|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AK225631|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC106071|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF093543|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AF479620|TACC3|10460|transforming, acidic coiled-coil containing protein 3##AJ243997|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC111771|TACC3|10460|transforming, acidic coiled-coil containing protein 3##NM_006342|TACC3|10460|transforming, acidic coiled-coil containing protein 3##BC126370|TMEM129|92305|transmembrane protein 129##BC009331|TMEM129|92305|transmembrane protein 129##BC018921|TMEM129|92305|transmembrane protein 129##NM_001127266|TMEM129|92305|transmembrane protein 129##NM_138385|TMEM129|92305|transmembrane protein 129##AB209441|FGFR3|2261|fibroblast growth factor receptor 3##NM_000142|FGFR3|2261|fibroblast growth factor receptor 3##NM_001163213|FGFR3|2261|fibroblast growth factor receptor 3##NM_022965|FGFR3|2261|fibroblast growth factor receptor 3##DQ893606|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK293572|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC014500|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##BC021208|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AF061025|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##NM_012318|LETM1|3954|leucine zipper-EF-hand containing transmembrane protein 1##AK289697|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1##NM_001042424|WHSC1|7468|Wolf-Hirschhorn syndrome candidate 1	0.0	
chr4	27050269	27050349	reg1014990.p2	3.455	+	AF328905 NM_001169117 NM_001169118 NM_020860 TSC_hg19_v1_chr4_+_26862406 BC146661 BC152554 AK096846 BC136449 BC171766 AB040915 AL136577	-187769	+	NM_018317 TSC_hg19_v1_chr4_+_26585705 AK001944 AK225395 AK289631 AK310795 BC031642 AB449905 CU689214	-464629	+	AB528043 AY322549 BC074987 L13605 L19315 NM_000730 AK313978	-558324	-	TSC_hg19_v1_chr4_+_30721990 NM_032456 AB006755 NM_001173523 NM_002589 NM_032457 BC020338	3671690	+	AB006757 TSC_hg19_v1_chr4_+_30722198	3671885	+	TSC_hg19_v1_chr4_+_30722465 AB006756	3672150	+	AF328905|STIM2|57620|stromal interaction molecule 2##NM_001169117|STIM2|57620|stromal interaction molecule 2##NM_001169118|STIM2|57620|stromal interaction molecule 2##NM_020860|STIM2|57620|stromal interaction molecule 2##BC146661|STIM2|57620|stromal interaction molecule 2##BC152554|STIM2|57620|stromal interaction molecule 2##AK096846|STIM2|57620|stromal interaction molecule 2##BC136449|STIM2|57620|stromal interaction molecule 2##BC171766|STIM2|57620|stromal interaction molecule 2##AB040915|STIM2|57620|stromal interaction molecule 2##AL136577|STIM2|57620|stromal interaction molecule 2##NM_018317|TBC1D19|55296|TBC1 domain family, member 19##AK001944|TBC1D19|55296|TBC1 domain family, member 19##AK225395|TBC1D19|55296|TBC1 domain family, member 19##AK289631|TBC1D19|55296|TBC1 domain family, member 19##AK310795|TBC1D19|55296|TBC1 domain family, member 19##BC031642|TBC1D19|55296|TBC1 domain family, member 19##AB449905|TBC1D19|55296|TBC1 domain family, member 19##AY322549|CCKAR|886|cholecystokinin A receptor##BC074987|CCKAR|886|cholecystokinin A receptor##L13605|CCKAR|886|cholecystokinin A receptor##L19315|CCKAR|886|cholecystokinin A receptor##NM_000730|CCKAR|886|cholecystokinin A receptor##AK313978|CCKAR|886|cholecystokinin A receptor##NM_032456|PCDH7|5099|protocadherin 7##AB006755|PCDH7|5099|protocadherin 7##NM_001173523|PCDH7|5099|protocadherin 7##NM_002589|PCDH7|5099|protocadherin 7##NM_032457|PCDH7|5099|protocadherin 7##BC020338|PCDH7|5099|protocadherin 7##AB006757|PCDH7|5099|protocadherin 7##AB006756|PCDH7|5099|protocadherin 7	0.0	
chr6	115866604	115866741	reg1039049.p1	3.455	+	AF503292 NM_153612 BC093911 BC093913	-1482648	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-1574336	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	-1574400	-	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	515210	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	555337	+	AK097758 TSC_hg19_v1_chr6_-_116422450	555758	-	AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	0.346282	CTCF.p2:39:0.346
chr10	22862741	22862882	reg1007459.p1	3.454	+	TSC_hg19_v1_chr10_+_22726003 AK295718	-136812	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-228355	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-252646	+	AK294817 TSC_hg19_v1_chr10_-_23003038	140226	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	140679	-	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	354170	+	AK295718|LOC100289455|100289455|uncharacterized LOC100289455##NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3	0.0	
chr1	211689077	211689203	reg1011619.p2	3.454	+	AY191519 NM_001164688 NM_183059	-22882	-	TSC_hg19_v1_chr1_+_211556168 BC005997	-132972	+	TSC_hg19_v1_chr1_+_211556144 AK130858	-132993	+	AF364518 TSC_hg19_v1_chr1_-_211751805	62622	-	AB451467 TSC_hg19_v1_chr1_-_211752048	62860	-	TSC_hg19_v1_chr1_-_211752056 BC121015 BC121016 NM_021194	62948	-	AY191519|RD3|343035|retinal degeneration 3##NM_001164688|RD3|343035|retinal degeneration 3##NM_183059|RD3|343035|retinal degeneration 3##BC005997|LINC00467|84791|long intergenic non-protein coding RNA 467##AK130858|LINC00467|84791|long intergenic non-protein coding RNA 467##AF364518|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##AB451467|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121015|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##BC121016|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1##NM_021194|SLC30A1|7779|solute carrier family 30 (zinc transporter), member 1	0.0	
chr1	36641176	36641304	reg1045238.p1	3.454	+	TSC_hg19_v1_chr1_+_36636693 AF218002 BC111428	-4464	+	TSC_hg19_v1_chr1_+_36621782 BC057293 AF064852 AK096341 BC106053 NM_018067	-19428	+	TSC_hg19_v1_chr1_+_36621723 AB033013	-19638	+	TSC_hg19_v1_chr1_+_36690029 NM_005119	48774	+	TSC_hg19_v1_chr1_+_36690047 BC065519 BC010997 AF117756 BC002501 BC019076 BC112330 BC112350	48822	+	EU446755 TSC_hg19_v1_chr1_+_36748231	106960	+	AF218002|MAP7D1|55700|MAP7 domain containing 1##BC111428|MAP7D1|55700|MAP7 domain containing 1##BC057293|MAP7D1|55700|MAP7 domain containing 1##AF064852|MAP7D1|55700|MAP7 domain containing 1##AK096341|MAP7D1|55700|MAP7 domain containing 1##BC106053|MAP7D1|55700|MAP7 domain containing 1##NM_018067|MAP7D1|55700|MAP7 domain containing 1##AB033013|MAP7D1|55700|MAP7 domain containing 1##NM_005119|THRAP3|9967|thyroid hormone receptor associated protein 3##BC065519|THRAP3|9967|thyroid hormone receptor associated protein 3##BC010997|THRAP3|9967|thyroid hormone receptor associated protein 3##AF117756|THRAP3|9967|thyroid hormone receptor associated protein 3##BC002501|THRAP3|9967|thyroid hormone receptor associated protein 3##BC019076|THRAP3|9967|thyroid hormone receptor associated protein 3##BC112330|THRAP3|9967|thyroid hormone receptor associated protein 3##BC112350|THRAP3|9967|thyroid hormone receptor associated protein 3##EU446755|THRAP3|9967|thyroid hormone receptor associated protein 3	0.0	
chr1	39957142	39957209	reg1045126.p2	3.454	+	TSC_hg19_v1_chr1_+_39922264 AK023821	-34856	+	NM_015038	-82000	+	AK299010 NM_012090 TSC_hg19_v1_chr1_+_39547088	-410087	+	TSC_hg19_v1_chr1_+_39957300 AY303954 NM_181809 BC131617	170	+	BC029969 TSC_hg19_v1_chr1_-_40042150	84936	-	U75686 BC065540 TSC_hg19_v1_chr1_-_40042460 BC071591	85262	-	AK023821|MACF1|23499|microtubule-actin crosslinking factor 1##NM_015038|KIAA0754|643314|KIAA0754##AK299010|MACF1|23499|microtubule-actin crosslinking factor 1##NM_012090|MACF1|23499|microtubule-actin crosslinking factor 1##AY303954|BMP8A|353500|bone morphogenetic protein 8a##NM_181809|BMP8A|353500|bone morphogenetic protein 8a##BC131617|BMP8A|353500|bone morphogenetic protein 8a##BC029969|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##U75686|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC065540|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)##BC071591|PABPC4|8761|poly(A) binding protein, cytoplasmic 4 (inducible form)	0.0	
chr14	98694050	98694230	reg1025106.p2	3.454	+	TSC_hg19_v1_chr14_+_97263749 NM_003384 AK290110 BC103761 AB000449 BC112075 BC113510 BC005970	-1430425	+	TSC_hg19_v1_chr14_+_96968778 BX161482 BC015150	-1725356	+	TSC_hg19_v1_chr14_+_96968726 BX248753 AK295020 AK307659 BC000927	-1725394	+	AK098639 NM_182560	483809	+	AY752976 AB043584 TSC_hg19_v1_chr14_-_99737679	1043477	-	AJ404614 NM_022898 NM_138576 TSC_hg19_v1_chr14_-_99737958	1043750	-	NM_003384|VRK1|7443|vaccinia related kinase 1##AK290110|VRK1|7443|vaccinia related kinase 1##BC103761|VRK1|7443|vaccinia related kinase 1##AB000449|VRK1|7443|vaccinia related kinase 1##BC112075|VRK1|7443|vaccinia related kinase 1##BC113510|VRK1|7443|vaccinia related kinase 1##BC005970|VRK1|7443|vaccinia related kinase 1##BX161482|PAPOLA|10914|poly(A) polymerase alpha##BC015150|PAPOLA|10914|poly(A) polymerase alpha##BX248753|PAPOLA|10914|poly(A) polymerase alpha##AK295020|PAPOLA|10914|poly(A) polymerase alpha##AK307659|PAPOLA|10914|poly(A) polymerase alpha##BC000927|PAPOLA|10914|poly(A) polymerase alpha##AK098639|C14orf177|283598|chromosome 14 open reading frame 177##NM_182560|C14orf177|283598|chromosome 14 open reading frame 177##AB043584|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##AJ404614|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_022898|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)##NM_138576|BCL11B|64919|B-cell CLL/lymphoma 11B (zinc finger protein)	0.0	
chr16	5306988	5307064	reg1038826.p1	3.454	+	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	-159258	-	NM_019109 TSC_hg19_v1_chr16_+_5121825 AK075373 BC031095 AB019038 BC004402 AK311475 CU678708 DQ895010 EU176309	-185196	+	TSC_hg19_v1_chr16_-_5116030 BC033681 AY358483 NM_001098514 NM_152459	-190939	-	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	762199	+	TSC_hg19_v1_chr16_+_6533765 BC033885	1226749	+	AK001027 NM_001142334	1516783	+	BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##NM_019109|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK075373|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC031095|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AB019038|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC004402|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK311475|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##DQ895010|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##EU176309|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC033681|C16orf89|146556|chromosome 16 open reading frame 89##AY358483|C16orf89|146556|chromosome 16 open reading frame 89##NM_001098514|C16orf89|146556|chromosome 16 open reading frame 89##NM_152459|C16orf89|146556|chromosome 16 open reading frame 89##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	0.0	
chr16	8962106	8962221	reg1034695.p1	3.454	+	NM_000303 TSC_hg19_v1_chr16_+_8891675 AK296123 U85773 AK300785 AK291537 AK299979 AK311035 AK312532 AK304320 AK296630 BC008310	-70465	+	TSC_hg19_v1_chr16_-_8891497 BC015912 AK225638 AL080088 AK314404 NM_015421 AK093383	-70618	-	TSC_hg19_v1_chr16_+_8814575 AK290501 NM_001127448 AK310771	-147583	+	NM_001042476 BC001333	89	-	TSC_hg19_v1_chr16_-_8962864 BC108283 BC000782 AK093698 AK311777 NM_014316 BC003366	697	-	TSC_hg19_v1_chr16_-_9057250 NM_003470 Z72499	95132	-	NM_000303|PMM2|5373|phosphomannomutase 2##U85773|PMM2|5373|phosphomannomutase 2##AK300785|PMM2|5373|phosphomannomutase 2##AK291537|PMM2|5373|phosphomannomutase 2##AK299979|PMM2|5373|phosphomannomutase 2##AK311035|PMM2|5373|phosphomannomutase 2##AK312532|PMM2|5373|phosphomannomutase 2##AK304320|PMM2|5373|phosphomannomutase 2##AK296630|PMM2|5373|phosphomannomutase 2##BC008310|PMM2|5373|phosphomannomutase 2##BC015912|TMEM186|25880|transmembrane protein 186##AK225638|TMEM186|25880|transmembrane protein 186##AL080088|TMEM186|25880|transmembrane protein 186##AK314404|TMEM186|25880|transmembrane protein 186##NM_015421|TMEM186|25880|transmembrane protein 186##AK093383|TMEM186|25880|transmembrane protein 186##AK290501|ABAT|18|4-aminobutyrate aminotransferase##NM_001127448|ABAT|18|4-aminobutyrate aminotransferase##AK310771|ABAT|18|4-aminobutyrate aminotransferase##NM_001042476|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC001333|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC108283|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC000782|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK093698|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##AK311777|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_014316|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##BC003366|CARHSP1|23589|calcium regulated heat stable protein 1, 24kDa##NM_003470|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)##Z72499|USP7|7874|ubiquitin specific peptidase 7 (herpes virus-associated)	0.0	
chr17	8710185	8710366	reg1035034.p1	3.454	+	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-7723	-	BC146949 BC146966 BC171861 NM_001128076	-48399	-	BC029224 AK057296 NM_001158261 NM_144681	-62147	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	60709	-	AY725853 AF128881 NM_014308	105541	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	158706	-	BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##BC146949|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC146966|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC171861|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##NM_001128076|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC029224|CCDC42|146849|coiled-coil domain containing 42##AK057296|CCDC42|146849|coiled-coil domain containing 42##NM_001158261|CCDC42|146849|coiled-coil domain containing 42##NM_144681|CCDC42|146849|coiled-coil domain containing 42##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5	0.0	
chr18	54745611	54745689	reg1024865.p2	3.454	+	TSC_hg19_v1_chr18_+_54424445 BC050352	-321202	+	TSC_hg19_v1_chr18_+_54318593 AK057141 NM_015285 NM_052834 AB011113 BC150282	-427044	+	TSC_hg19_v1_chr18_-_54305956 BC001156 AF003938 NM_004786	-439736	-	AK127964 TSC_hg19_v1_chr18_+_54814333 BC021740 BC035018 AK301799	68689	+	AB208996 NM_015879	274070	+	TSC_hg19_v1_chr18_+_55102810 NM_004852 Y18198 BC108925 BC108926	357215	+	BC050352|WDR7|23335|WD repeat domain 7##AK057141|WDR7|23335|WD repeat domain 7##NM_015285|WDR7|23335|WD repeat domain 7##NM_052834|WDR7|23335|WD repeat domain 7##AB011113|WDR7|23335|WD repeat domain 7##BC150282|WDR7|23335|WD repeat domain 7##BC001156|TXNL1|9352|thioredoxin-like 1##AF003938|TXNL1|9352|thioredoxin-like 1##NM_004786|TXNL1|9352|thioredoxin-like 1##AK127964|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC021740|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##BC035018|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AK301799|BOD1P|284257|biorientation of chromosomes in cell division 1 pseudogene##AB208996|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_015879|ST8SIA3|51046|ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3##NM_004852|ONECUT2|9480|one cut homeobox 2##Y18198|ONECUT2|9480|one cut homeobox 2##BC108925|ONECUT2|9480|one cut homeobox 2##BC108926|ONECUT2|9480|one cut homeobox 2	0.0	
chr2	99452568	99452749	reg1034987.p1	3.454	+	NM_012214 TSC_hg19_v1_chr2_-_99347596	-105045	-	TSC_hg19_v1_chr2_-_99347557 AK314024	-105162	-	AK304393 AK309852 NM_001160154	-172723	-	BC068277 NM_207362	100022	-	BC028366 NM_182911	305377	-	AK126402 AK314133 BC021264 NM_144706	305407	+	NM_012214|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK314024|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK304393|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##AK309852|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##NM_001160154|MGAT4A|11320|mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme A##BC068277|C2orf55|343990|chromosome 2 open reading frame 55##NM_207362|C2orf55|343990|chromosome 2 open reading frame 55##BC028366|TSGA10|80705|testis specific, 10##NM_182911|TSGA10|80705|testis specific, 10##AK314133|C2orf15|150590|chromosome 2 open reading frame 15##BC021264|C2orf15|150590|chromosome 2 open reading frame 15##NM_144706|C2orf15|150590|chromosome 2 open reading frame 15	0.0	
chr3	153553454	153553564	reg1041828.p1	3.454	+	AF086445 NM_001101337	-351226	+	TSC_hg19_v1_chr3_+_152880058 BC012362	-673461	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	-673483	+	AK127282 NM_001251962	285282	+	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	285693	+	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	488751	-	AF086445|C3orf79|152118|chromosome 3 open reading frame 79##NM_001101337|C3orf79|152118|chromosome 3 open reading frame 79##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##AK127282|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251962|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36	0.101703	
chr4	25859145	25859243	reg1040483.p1	3.454	+	NM_001177999 AK314514	-201104	+	NM_001177998 NM_006424 AK292675 AF111856 AK075046 TSC_hg19_v1_chr4_+_25657473 AF146796 BC142704 BC146666	-201734	+	TSC_hg19_v1_chr4_+_25378893 AK292336 AF191338	-480232	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	5360	-	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	56670	+	L07875 BC020780 NM_005349 NM_203283	462125	+	NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_001177998|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##NM_006424|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK292675|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF111856|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK075046|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AF146796|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC142704|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##BC146666|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK292336|ANAPC4|29945|anaphase promoting complex subunit 4##AF191338|ANAPC4|29945|anaphase promoting complex subunit 4##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.0	
chr4	3138255	3138429	reg1034215.p1	3.454	+	L12392 TSC_hg19_v1_chr4_+_3076416 AB016794 NM_002111	-62015	+	TSC_hg19_v1_chr4_+_2965297 AK292390 AK223581 NM_001004056 NM_001004057 NM_182982 BC110825 BC027597 BC039732 BC117320 U33054 U33055 U33056 AK293569 X97879 X97880 X97881 X98118 HQ258463 X75897	-172807	+	TSC_hg19_v1_chr4_-_2965155 AK292939	-173148	-	AK126094 NM_001042690	112424	+	TSC_hg19_v1_chr4_+_3294763 AK310999 BC028154	156418	+	AF030111 NM_002926 NM_198229	177531	+	L12392|HTT|3064|huntingtin##AB016794|HTT|3064|huntingtin##NM_002111|HTT|3064|huntingtin##AK292390|GRK4|2868|G protein-coupled receptor kinase 4##AK223581|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004056|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004057|GRK4|2868|G protein-coupled receptor kinase 4##NM_182982|GRK4|2868|G protein-coupled receptor kinase 4##BC027597|GRK4|2868|G protein-coupled receptor kinase 4##BC117320|GRK4|2868|G protein-coupled receptor kinase 4##U33054|GRK4|2868|G protein-coupled receptor kinase 4##U33055|GRK4|2868|G protein-coupled receptor kinase 4##U33056|GRK4|2868|G protein-coupled receptor kinase 4##X97879|GRK4|2868|G protein-coupled receptor kinase 4##X97880|GRK4|2868|G protein-coupled receptor kinase 4##X97881|GRK4|2868|G protein-coupled receptor kinase 4##X98118|GRK4|2868|G protein-coupled receptor kinase 4##HQ258463|GRK4|2868|G protein-coupled receptor kinase 4##X75897|GRK4|2868|G protein-coupled receptor kinase 4##AK292939|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##AK126094|C4orf44|345222|chromosome 4 open reading frame 44##NM_001042690|C4orf44|345222|chromosome 4 open reading frame 44##AK310999|RGS12|6002|regulator of G-protein signaling 12##BC028154|RGS12|6002|regulator of G-protein signaling 12##AF030111|RGS12|6002|regulator of G-protein signaling 12##NM_002926|RGS12|6002|regulator of G-protein signaling 12##NM_198229|RGS12|6002|regulator of G-protein signaling 12	0.998741	CTCF.p2:15:0.999
chr6	16007123	16007189	reg1036484.p1	3.454	+	TSC_hg19_v1_chr6_-_15663260 NM_032122 NM_183040	-343866	-	EU831643 EU831727 EU832348 EU832433 TSC_hg19_v1_chr6_-_15663205 AK310590 AF394226 AL136637 BC011912 AK290718 AK054593 AY265460	-343979	-	TSC_hg19_v1_chr6_+_15249113 AK303610	-758043	+	TSC_hg19_v1_chr6_+_16129316 AK074391 AK314648 NM_013262	122146	+	TSC_hg19_v1_chr6_+_16129328 BC002860 AF258586 AF187016 AF006003 AF212221 EU176184 CU678250 BT007055	122281	+	TSC_hg19_v1_chr6_+_16143281 AK026739	136154	+	NM_032122|DTNBP1|84062|dystrobrevin binding protein 1##NM_183040|DTNBP1|84062|dystrobrevin binding protein 1##EU831643|DTNBP1|84062|dystrobrevin binding protein 1##EU831727|DTNBP1|84062|dystrobrevin binding protein 1##EU832348|DTNBP1|84062|dystrobrevin binding protein 1##EU832433|DTNBP1|84062|dystrobrevin binding protein 1##AK310590|DTNBP1|84062|dystrobrevin binding protein 1##AF394226|DTNBP1|84062|dystrobrevin binding protein 1##AL136637|DTNBP1|84062|dystrobrevin binding protein 1##BC011912|DTNBP1|84062|dystrobrevin binding protein 1##AK290718|DTNBP1|84062|dystrobrevin binding protein 1##AK054593|DTNBP1|84062|dystrobrevin binding protein 1##AY265460|DTNBP1|84062|dystrobrevin binding protein 1##AK303610|JARID2|3720|jumonji, AT rich interactive domain 2##AK074391|MYLIP|29116|myosin regulatory light chain interacting protein##AK314648|MYLIP|29116|myosin regulatory light chain interacting protein##NM_013262|MYLIP|29116|myosin regulatory light chain interacting protein##BC002860|MYLIP|29116|myosin regulatory light chain interacting protein##AF258586|MYLIP|29116|myosin regulatory light chain interacting protein##AF187016|MYLIP|29116|myosin regulatory light chain interacting protein##AF006003|MYLIP|29116|myosin regulatory light chain interacting protein##AF212221|MYLIP|29116|myosin regulatory light chain interacting protein##EU176184|MYLIP|29116|myosin regulatory light chain interacting protein##BT007055|MYLIP|29116|myosin regulatory light chain interacting protein##AK026739|MYLIP|29116|myosin regulatory light chain interacting protein	0.0	
chr6	71257165	71257270	reg1038035.p1	3.454	+	NM_001162529 AB037832	-121060	+	TSC_hg19_v1_chr6_+_71123224 CR749254 BC131782	-134003	+	TSC_hg19_v1_chr6_+_71123122 NM_001105531 NM_020819	-134104	+	TSC_hg19_v1_chr6_+_71276632 BC018085 NM_145267 BC104649 GQ129294 GQ129295	19408	+	TSC_hg19_v1_chr6_+_71377511 NM_001044305 NM_021940 AF442495	120306	+	TSC_hg19_v1_chr6_+_71377620 AK315579 BC028074 BC008672 AK303387 BC036123 AK023221 AY055003 AY055004 AK222711 AK290448 CU688386	120438	+	NM_001162529|FAM135A|57579|family with sequence similarity 135, member A##AB037832|FAM135A|57579|family with sequence similarity 135, member A##CR749254|FAM135A|57579|family with sequence similarity 135, member A##BC131782|FAM135A|57579|family with sequence similarity 135, member A##NM_001105531|FAM135A|57579|family with sequence similarity 135, member A##NM_020819|FAM135A|57579|family with sequence similarity 135, member A##BC018085|C6orf57|135154|chromosome 6 open reading frame 57##NM_145267|C6orf57|135154|chromosome 6 open reading frame 57##BC104649|C6orf57|135154|chromosome 6 open reading frame 57##GQ129294|C6orf57|135154|chromosome 6 open reading frame 57##GQ129295|C6orf57|135154|chromosome 6 open reading frame 57##NM_001044305|SMAP1|60682|small ArfGAP 1##NM_021940|SMAP1|60682|small ArfGAP 1##AF442495|SMAP1|60682|small ArfGAP 1##AK315579|SMAP1|60682|small ArfGAP 1##BC028074|SMAP1|60682|small ArfGAP 1##BC008672|SMAP1|60682|small ArfGAP 1##AK303387|SMAP1|60682|small ArfGAP 1##BC036123|SMAP1|60682|small ArfGAP 1##AK023221|SMAP1|60682|small ArfGAP 1##AY055003|SMAP1|60682|small ArfGAP 1##AY055004|SMAP1|60682|small ArfGAP 1##AK222711|SMAP1|60682|small ArfGAP 1##AK290448|SMAP1|60682|small ArfGAP 1	0.886908	CTCF.p2:0:0.887
chr7	17102753	17102843	reg1040142.p2	3.454	+	AY359065 BC058284 NM_176813	-181194	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-258127	-	TSC_hg19_v1_chr7_+_16793401 AK093487 NM_014399 AK026587 AK075475 AK316595 AY358995 AF100759 BC033863 AF120265 DQ892059 DQ895252 CR542107	-309342	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	235471	+	TSC_hg19_v1_chr7_+_17382906 BC021696	280108	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	877251	-	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK093487|TSPAN13|27075|tetraspanin 13##NM_014399|TSPAN13|27075|tetraspanin 13##AK026587|TSPAN13|27075|tetraspanin 13##AK075475|TSPAN13|27075|tetraspanin 13##AK316595|TSPAN13|27075|tetraspanin 13##AY358995|TSPAN13|27075|tetraspanin 13##AF100759|TSPAN13|27075|tetraspanin 13##BC033863|TSPAN13|27075|tetraspanin 13##AF120265|TSPAN13|27075|tetraspanin 13##DQ892059|TSPAN13|27075|tetraspanin 13##DQ895252|TSPAN13|27075|tetraspanin 13##CR542107|TSPAN13|27075|tetraspanin 13##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13	0.019624	
chr9	140731514	140731617	reg1045003.p2	3.454	+	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	-93036	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-218098	+	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	-218122	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	40669	+	TSC_hg19_v1_chr9_+_140918045 AB209467	186509	+	TSC_hg19_v1_chr9_+_141044539 AK308459	312986	+	AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AK308459|TUBBP5|643224|tubulin, beta pseudogene 5	0.218479	CTCF.p2:5:0.218
chr9	71417701	71417830	reg1045573.p2	3.454	+	CU680482 TSC_hg19_v1_chr9_+_71395147	-22649	+	TSC_hg19_v1_chr9_+_71394980 NM_138333 BC013062 AK126379 AK304099	-22814	+	TSC_hg19_v1_chr9_+_71320206 AK295587 AK292734 NM_003558	-97389	+	TSC_hg19_v1_chr9_-_71590760 AK057188	172993	-	DQ890764 DQ893927 AB463461 BC039888 NM_002732	211258	-	NM_000144 NM_001161706 NM_181425	232713	+	NM_138333|FAM122A|116224|family with sequence similarity 122A##BC013062|FAM122A|116224|family with sequence similarity 122A##AK126379|FAM122A|116224|family with sequence similarity 122A##AK295587|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##AK292734|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_003558|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##DQ890764|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##DQ893927|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##BC039888|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_002732|PRKACG|5568|protein kinase, cAMP-dependent, catalytic, gamma##NM_000144|FXN|2395|frataxin##NM_001161706|FXN|2395|frataxin##NM_181425|FXN|2395|frataxin	0.0	
chr1	229714661	229714808	reg1034209.p1	3.453	+	TSC_hg19_v1_chr1_-_229694431 AB013380 BC064930 AF216833 NM_012089	-20306	-	TSC_hg19_v1_chr1_-_229644079 AK001676 NM_018230 AK304061	-70634	-	AB384686 DQ894268 EU176236 AK092339 AK314431 AX747487 TSC_hg19_v1_chr1_-_229644075 BC020107 AK304861	-70699	-	BC041094 TSC_hg19_v1_chr1_-_229761747	47011	-	NM_001025247 NM_014409 TSC_hg19_v1_chr1_-_229761804	47064	-	AK291013 TSC_hg19_v1_chr1_+_229761973 D50923 NM_014777 BC059381	47240	+	AB013380|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##BC064930|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##AF216833|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##NM_012089|ABCB10|23456|ATP-binding cassette, sub-family B (MDR/TAP), member 10##AK001676|NUP133|55746|nucleoporin 133kDa##NM_018230|NUP133|55746|nucleoporin 133kDa##AK304061|NUP133|55746|nucleoporin 133kDa##DQ894268|NUP133|55746|nucleoporin 133kDa##EU176236|NUP133|55746|nucleoporin 133kDa##AK092339|NUP133|55746|nucleoporin 133kDa##AK314431|NUP133|55746|nucleoporin 133kDa##BC020107|NUP133|55746|nucleoporin 133kDa##AK304861|NUP133|55746|nucleoporin 133kDa##BC041094|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_001025247|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##NM_014409|TAF5L|27097|TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa##AK291013|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##D50923|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##NM_014777|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)##BC059381|URB2|9816|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	0.0	
chr1	34628658	34628838	reg1009914.p1	3.453	+	AK097707 NM_145205	-302673	+	NM_145238 AK131405 TSC_hg19_v1_chr1_+_33938251 AK290195 BC008827 BC011404	-690497	+	TSC_hg19_v1_chr1_-_33896604 AJ242730	-732140	-	TSC_hg19_v1_chr1_-_34630856 AB212622	2117	-	AY210418 NM_052896	2694	-	AK123355 NM_032884 BC007637	3851	+	AK097707|HMGB4|127540|high mobility group box 4##NM_145205|HMGB4|127540|high mobility group box 4##NM_145238|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK131405|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AK290195|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC008827|ZSCAN20|7579|zinc finger and SCAN domain containing 20##BC011404|ZSCAN20|7579|zinc finger and SCAN domain containing 20##AJ242730|PHC2|1912|polyhomeotic homolog 2 (Drosophila)##AB212622|CSMD2|114784|CUB and Sushi multiple domains 2##AY210418|CSMD2|114784|CUB and Sushi multiple domains 2##NM_052896|CSMD2|114784|CUB and Sushi multiple domains 2##AK123355|C1orf94|84970|chromosome 1 open reading frame 94##NM_032884|C1orf94|84970|chromosome 1 open reading frame 94##BC007637|C1orf94|84970|chromosome 1 open reading frame 94	0.0	
chr14	74417035	74417129	reg1044978.p2	3.453	+	AK303350 AK316356 TSC_hg19_v1_chr14_+_74417004 NM_182476 AK130167 AK303304 BC014181 AK222965 AK294370 AK295517 AK296386 AK307306 BC014483 DQ892635 DQ895873 AF132944 CU677021 CU680818	-105	+	TSC_hg19_v1_chr14_-_74416819 BC053909 AK056259	-260	-	AK296040 NM_182480 BX248000	-447	+	AK302982 NM_152445	34	-	TSC_hg19_v1_chr14_-_74485992 BC107878 NM_001249	68844	-	TSC_hg19_v1_chr14_+_74486065 NM_025057 BC044808	69003	+	AK303350|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##AK316356|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##NM_182476|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##AK130167|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##AK303304|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##BC014181|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##AK222965|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##AK294370|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##AK295517|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##AK296386|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##AK307306|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##BC014483|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##DQ892635|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##DQ895873|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##AF132944|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##BC053909|FAM161B|145483|family with sequence similarity 161, member B##AK056259|FAM161B|145483|family with sequence similarity 161, member B##AK296040|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##NM_182480|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##BX248000|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##AK302982|FAM161B|145483|family with sequence similarity 161, member B##NM_152445|FAM161B|145483|family with sequence similarity 161, member B##NM_001249|ENTPD5|957|ectonucleoside triphosphate diphosphohydrolase 5##NM_025057|C14orf45|80127|chromosome 14 open reading frame 45##BC044808|C14orf45|80127|chromosome 14 open reading frame 45	0.0	
chr16	46808346	46808416	reg1035821.p1	3.453	+	AB451455 BC109096 BC109097 AJ247087 NM_182493	-26219	-	AF139658 TSC_hg19_v1_chr16_+_46723600 BC039032 BC063565 AK310633 AK021946 AB528212 AM392646 AM392910 AM393245 AM393680 AM393794 CU687764	-84784	+	BC050725 NM_014321 AK024019 TSC_hg19_v1_chr16_+_46723570 AK024077	-84816	+	TSC_hg19_v1_chr16_-_46865090 CU691166 BC056676 BX647945 NM_001001436	56707	-	TSC_hg19_v1_chr16_+_46918291 AY029173 NM_133443 BC062555	109900	+	NM_001142466 AK094971	110721	+	AB451455|MYLK3|91807|myosin light chain kinase 3##BC109096|MYLK3|91807|myosin light chain kinase 3##BC109097|MYLK3|91807|myosin light chain kinase 3##AJ247087|MYLK3|91807|myosin light chain kinase 3##NM_182493|MYLK3|91807|myosin light chain kinase 3##AF139658|ORC6|23594|origin recognition complex, subunit 6##BC039032|ORC6|23594|origin recognition complex, subunit 6##BC063565|ORC6|23594|origin recognition complex, subunit 6##AK310633|ORC6|23594|origin recognition complex, subunit 6##AK021946|ORC6|23594|origin recognition complex, subunit 6##AM392646|ORC6|23594|origin recognition complex, subunit 6##AM392910|ORC6|23594|origin recognition complex, subunit 6##AM393245|PPA2|27068|pyrophosphatase (inorganic) 2##AM393680|ORC6|23594|origin recognition complex, subunit 6##AM393794|PPA2|27068|pyrophosphatase (inorganic) 2##BC050725|ORC6|23594|origin recognition complex, subunit 6##NM_014321|ORC6|23594|origin recognition complex, subunit 6##AK024019|ORC6|23594|origin recognition complex, subunit 6##AK024077|ORC6|23594|origin recognition complex, subunit 6##BC056676|C16orf87|388272|chromosome 16 open reading frame 87##BX647945|C16orf87|388272|chromosome 16 open reading frame 87##NM_001001436|C16orf87|388272|chromosome 16 open reading frame 87##AY029173|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##NM_133443|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##BC062555|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##NM_001142466|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2##AK094971|GPT2|84706|glutamic pyruvate transaminase (alanine aminotransferase) 2	0.0	
chr17	52977743	52977809	reg1034911.p1	3.453	+	NM_032559 AK057272 AF333335 BC033802 AK302262 AK308265 CU689754	-1077461	+	NM_001243552	-1914897	+	BC029865 TSC_hg19_v1_chr17_-_50237384 AF288385 NM_001082534	-2740413	-	TSC_hg19_v1_chr17_+_52978217 NM_005486 AK001893 AK309164 AK225351 AJ010071 AK303912 AK300823 AK303913 AK315039 AK315907 AK223125 BC029396 AB590855	380	+	TSC_hg19_v1_chr17_-_53046016 AK293851 CR541837 DQ893136 DQ896418 AF044321 BC005895 AK295381 NM_001162861 NM_001162862 NM_004375	68241	-	TSC_hg19_v1_chr17_+_53046125 AK122865 NM_178509 BC125116 BC041485	68351	+	NM_032559|KIF2B|84643|kinesin family member 2B##AK057272|KIF2B|84643|kinesin family member 2B##AF333335|KIF2B|84643|kinesin family member 2B##BC033802|KIF2B|84643|kinesin family member 2B##AK302262|KIF2B|84643|kinesin family member 2B##NM_001243552|LOC100506650|100506650|uncharacterized LOC100506650##BC029865|CA10|56934|carbonic anhydrase X##AF288385|CA10|56934|carbonic anhydrase X##NM_001082534|CA10|56934|carbonic anhydrase X##NM_005486|TOM1L1|10040|target of myb1 (chicken)-like 1##AK001893|TOM1L1|10040|target of myb1 (chicken)-like 1##AK309164|TOM1L1|10040|target of myb1 (chicken)-like 1##AK225351|TOM1L1|10040|target of myb1 (chicken)-like 1##AJ010071|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303912|TOM1L1|10040|target of myb1 (chicken)-like 1##AK300823|TOM1L1|10040|target of myb1 (chicken)-like 1##AK303913|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315039|TOM1L1|10040|target of myb1 (chicken)-like 1##AK315907|TOM1L1|10040|target of myb1 (chicken)-like 1##AK223125|TOM1L1|10040|target of myb1 (chicken)-like 1##BC029396|TOM1L1|10040|target of myb1 (chicken)-like 1##AK293851|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##CR541837|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##DQ893136|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##DQ896418|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AF044321|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##BC005895|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AK295381|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_001162861|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_001162862|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##NM_004375|COX11|1353|COX11 cytochrome c oxidase assembly homolog (yeast)##AK122865|STXBP4|252983|syntaxin binding protein 4##NM_178509|STXBP4|252983|syntaxin binding protein 4##BC125116|STXBP4|252983|syntaxin binding protein 4##BC041485|STXBP4|252983|syntaxin binding protein 4	0.0	
chr18	45548991	45549125	reg1005368.p1	3.453	+	TSC_hg19_v1_chr18_-_45457485 NM_001003652 NM_001135937	-91569	-	TSC_hg19_v1_chr18_-_45457252 AK299218 U59911 AF027964 BC025699 AK312963	-91843	-	BC014840 NM_005901	-92133	-	AM988836 AK296709 NM_001039360 EF120357	114641	-	TSC_hg19_v1_chr18_-_45935627 AM991276 AM991277 AM991278 AM991279 AM991280 AM991281 AM991282 AM991283 AM991284 AM991285 AM988839	386651	-	TSC_hg19_v1_chr18_+_46065556 AB007887 NM_001142397 NM_014772 BC042146	516715	+	NM_001003652|SMAD2|4087|SMAD family member 2##NM_001135937|SMAD2|4087|SMAD family member 2##AK299218|SMAD2|4087|SMAD family member 2##U59911|SMAD2|4087|SMAD family member 2##AF027964|SMAD2|4087|SMAD family member 2##BC025699|SMAD2|4087|SMAD family member 2##AK312963|SMAD2|4087|SMAD family member 2##BC014840|SMAD2|4087|SMAD family member 2##NM_005901|SMAD2|4087|SMAD family member 2##AM988836|ZBTB7C|201501|zinc finger and BTB domain containing 7C##NM_001039360|ZBTB7C|201501|zinc finger and BTB domain containing 7C##EF120357|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AM988839|ZBTB7C|201501|zinc finger and BTB domain containing 7C##AB007887|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_001142397|CTIF|9811|CBP80/20-dependent translation initiation factor##NM_014772|CTIF|9811|CBP80/20-dependent translation initiation factor##BC042146|CTIF|9811|CBP80/20-dependent translation initiation factor	0.0	
chr20	30001522	30001602	reg1033623.p1	3.453	+	NM_001171832	-922	-	HQ258031 AY501000 BC130607 BC130609 NM_001011878	-7551	-	AF479698 AF479699 AY122473 AY501001 AY358860 BC062212 AY122472 NM_153289 NM_153323 NM_173460	-23217	-	AY122475 NM_153324 AY358859 AY501002 BC126365 BC126391 AF479701	26893	+	DQ119827 NM_001037500 AB528811	59254	-	AK313060 BC039813 NM_014012 AF152863	61537	+	NM_001171832|DEFB121|245934|defensin, beta 121##HQ258031|DEFB121|245934|defensin, beta 121##AY501000|DEFB121|245934|defensin, beta 121##BC130607|DEFB121|245934|defensin, beta 121##BC130609|DEFB121|245934|defensin, beta 121##NM_001011878|DEFB121|245934|defensin, beta 121##AF479698|DEFB119|245932|defensin, beta 119##AF479699|DEFB119|245932|defensin, beta 119##AY122473|DEFB119|245932|defensin, beta 119##AY501001|DEFB119|245932|defensin, beta 119##AY358860|DEFB119|245932|defensin, beta 119##BC062212|DEFB119|245932|defensin, beta 119##AY122472|DEFB119|245932|defensin, beta 119##NM_153289|DEFB119|245932|defensin, beta 119##NM_153323|DEFB119|245932|defensin, beta 119##NM_173460|DEFB119|245932|defensin, beta 119##AY122475|DEFB123|245936|defensin, beta 123##NM_153324|DEFB123|245936|defensin, beta 123##AY358859|DEFB123|245936|defensin, beta 123##BC126365|DEFB123|245936|defensin, beta 123##BC126391|DEFB123|245936|defensin, beta 123##AF479701|DEFB123|245936|defensin, beta 123##DQ119827|DEFB124|245937|defensin, beta 124##NM_001037500|DEFB124|245937|defensin, beta 124##AK313060|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1##BC039813|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1##NM_014012|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1##AF152863|REM1|28954|RAS (RAD and GEM)-like GTP-binding 1	0.10227	
chr2	109948544	109948626	reg1034606.p2	3.453	+	NM_001099289 DQ307286	-202522	+	TSC_hg19_v1_chr2_-_109605671 AK313781 CR749352 AF130988 NM_022336	-342838	-	TSC_hg19_v1_chr2_-_109605623 AK296936	-342966	-	CU676536 TSC_hg19_v1_chr2_-_110371486 BC020502 AK295560 AK292038 AK092033 AF146760	422896	-	AK294427 BC050345 TSC_hg19_v1_chr2_-_110371735 AK021681 NM_144710 NM_178584	423140	-	BC036652 TSC_hg19_v1_chr2_+_110371940 BC066772 NM_023016 AK025523	423360	+	NM_001099289|SH3RF3|344558|SH3 domain containing ring finger 3##DQ307286|SH3RF3|344558|SH3 domain containing ring finger 3##AK313781|EDAR|10913|ectodysplasin A receptor##CR749352|EDAR|10913|ectodysplasin A receptor##AF130988|EDAR|10913|ectodysplasin A receptor##NM_022336|EDAR|10913|ectodysplasin A receptor##AK296936|EDAR|10913|ectodysplasin A receptor##BC020502|SEPT10|151011|septin 10##AK295560|SEPT10|151011|septin 10##AK292038|SEPT10|151011|septin 10##AK092033|SEPT10|151011|septin 10##AF146760|SEPT10|151011|septin 10##AK294427|SEPT10|151011|septin 10##BC050345|SEPT10|151011|septin 10##AK021681|SEPT10|151011|septin 10##NM_144710|SEPT10|151011|septin 10##NM_178584|SEPT10|151011|septin 10##BC036652|ANKRD57|65124|ankyrin repeat domain 57##BC066772|ANKRD57|65124|ankyrin repeat domain 57##NM_023016|ANKRD57|65124|ankyrin repeat domain 57##AK025523|ANKRD57|65124|ankyrin repeat domain 57	0.020061	
chr21	44788653	44788833	reg1028344.p1	3.453	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-199569	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-261059	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-261118	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	57246	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	58252	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	290619	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr2	242223499	242223622	reg1037215.p2	3.453	+	TSC_hg19_v1_chr2_-_242212511 AK309075	-11044	-	TSC_hg19_v1_chr2_-_242212245 AK300312 NM_001243900 NM_203346	-11316	-	TSC_hg19_v1_chr2_-_242212216 M64098	-11340	-	BC014455 NM_001008491 NM_006155 TSC_hg19_v1_chr2_+_242254810 D63878	31207	+	TSC_hg19_v1_chr2_-_242255074 BC001179 AK296684 AK312335	31475	-	BX647759 NM_005336 TSC_hg19_v1_chr2_-_242255118	31558	-	AK309075|HDLBP|3069|high density lipoprotein binding protein##AK300312|HDLBP|3069|high density lipoprotein binding protein##NM_001243900|HDLBP|3069|high density lipoprotein binding protein##NM_203346|HDLBP|3069|high density lipoprotein binding protein##M64098|HDLBP|3069|high density lipoprotein binding protein##BC014455|SEPT2|4735|septin 2##NM_001008491|SEPT2|4735|septin 2##NM_006155|SEPT2|4735|septin 2##D63878|SEPT2|4735|septin 2##BC001179|HDLBP|3069|high density lipoprotein binding protein##AK296684|HDLBP|3069|high density lipoprotein binding protein##AK312335|HDLBP|3069|high density lipoprotein binding protein##BX647759|HDLBP|3069|high density lipoprotein binding protein##NM_005336|HDLBP|3069|high density lipoprotein binding protein	0.0	
chr5	33847310	33847426	reg1033774.p2	3.453	+	TSC_hg19_v1_chr5_+_33441070 AK095852 AK293620 AK311361 AK315713 AK296783 M63180 BC010578 AK308342 BC000517 BC088355 AK222804 AB384811 CU674250 EU831444 DQ891416 DQ894590	-406229	+	AK292346 TSC_hg19_v1_chr5_+_33440874 NM_152295	-406512	+	BC131540 X52282 TSC_hg19_v1_chr5_+_32711843 AF025998	-1135563	+	BC139900 BC131733 AY358745 TSC_hg19_v1_chr5_-_33892090 BC058841 NM_030955	44677	-	TSC_hg19_v1_chr5_-_33892294 AJ250725	44927	-	D88437 NM_016568	89122	+	AK095852|TARS|6897|threonyl-tRNA synthetase##AK293620|TARS|6897|threonyl-tRNA synthetase##AK311361|TARS|6897|threonyl-tRNA synthetase##AK315713|TARS|6897|threonyl-tRNA synthetase##AK296783|TARS|6897|threonyl-tRNA synthetase##M63180|TARS|6897|threonyl-tRNA synthetase##BC010578|TARS|6897|threonyl-tRNA synthetase##AK308342|TARS|6897|threonyl-tRNA synthetase##BC000517|TARS|6897|threonyl-tRNA synthetase##BC088355|TARS|6897|threonyl-tRNA synthetase##AK222804|TARS|6897|threonyl-tRNA synthetase##EU831444|TARS|6897|threonyl-tRNA synthetase##DQ891416|TARS|6897|threonyl-tRNA synthetase##DQ894590|TARS|6897|threonyl-tRNA synthetase##AK292346|TARS|6897|threonyl-tRNA synthetase##NM_152295|TARS|6897|threonyl-tRNA synthetase##BC131540|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##X52282|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##AF025998|NPR3|4883|natriuretic peptide receptor C/guanylate cyclase C (atrionatriuretic peptide receptor C)##BC139900|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC131733|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AY358745|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##BC058841|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##NM_030955|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##AJ250725|ADAMTS12|81792|ADAM metallopeptidase with thrombospondin type 1 motif, 12##D88437|RXFP3|51289|relaxin/insulin-like family peptide receptor 3##NM_016568|RXFP3|51289|relaxin/insulin-like family peptide receptor 3	0.0	
chr6	154112338	154112448	reg1044342.p1	3.453	+	AB055767 TSC_hg19_v1_chr6_-_153603892	-508502	-	BC013117 NM_012419 AF202257 TSC_hg19_v1_chr6_-_153452453	-659973	-	TSC_hg19_v1_chr6_-_153323873 AK297671 NM_001114184 NM_019041	-788496	-	DQ680044 NM_001145279 NM_001145280 EU340241 EU340242 EU340243 NM_001145281	219239	+	L29301 NM_000914 NM_001008503 NM_001008504 NM_001008505 NM_001145282 NM_001145283 NM_001145284 NM_001145285 NM_001145286 L25119 U12569 AB590577 AK309655 AK313901 AY225404 AY364230 AY036622 AY036623 AY309001 AY309005 AY309006 AY309007 AY309008 AY309009 BC074927 AY521028	248167	+	EU360599 EU362990 NM_001145287	295248	+	BC013117|RGS17|26575|regulator of G-protein signaling 17##NM_012419|RGS17|26575|regulator of G-protein signaling 17##AF202257|RGS17|26575|regulator of G-protein signaling 17##AK297671|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_001114184|MTRF1L|54516|mitochondrial translational release factor 1-like##NM_019041|MTRF1L|54516|mitochondrial translational release factor 1-like##DQ680044|OPRM1|4988|opioid receptor, mu 1##NM_001145279|OPRM1|4988|opioid receptor, mu 1##NM_001145280|OPRM1|4988|opioid receptor, mu 1##EU340241|OPRM1|4988|opioid receptor, mu 1##EU340242|OPRM1|4988|opioid receptor, mu 1##EU340243|OPRM1|4988|opioid receptor, mu 1##NM_001145281|OPRM1|4988|opioid receptor, mu 1##L29301|OPRM1|4988|opioid receptor, mu 1##NM_000914|OPRM1|4988|opioid receptor, mu 1##NM_001008503|OPRM1|4988|opioid receptor, mu 1##NM_001008504|OPRM1|4988|opioid receptor, mu 1##NM_001008505|OPRM1|4988|opioid receptor, mu 1##NM_001145282|OPRM1|4988|opioid receptor, mu 1##NM_001145283|OPRM1|4988|opioid receptor, mu 1##NM_001145284|OPRM1|4988|opioid receptor, mu 1##NM_001145285|OPRM1|4988|opioid receptor, mu 1##NM_001145286|OPRM1|4988|opioid receptor, mu 1##L25119|OPRM1|4988|opioid receptor, mu 1##U12569|OPRM1|4988|opioid receptor, mu 1##AK313901|OPRM1|4988|opioid receptor, mu 1##AY225404|OPRM1|4988|opioid receptor, mu 1##AY364230|OPRM1|4988|opioid receptor, mu 1##AY036622|OPRM1|4988|opioid receptor, mu 1##AY036623|OPRM1|4988|opioid receptor, mu 1##AY309001|OPRM1|4988|opioid receptor, mu 1##AY309005|OPRM1|4988|opioid receptor, mu 1##AY309006|OPRM1|4988|opioid receptor, mu 1##AY309007|OPRM1|4988|opioid receptor, mu 1##AY309008|OPRM1|4988|opioid receptor, mu 1##AY309009|OPRM1|4988|opioid receptor, mu 1##BC074927|OPRM1|4988|opioid receptor, mu 1##AY521028|OPRM1|4988|opioid receptor, mu 1##EU360599|OPRM1|4988|opioid receptor, mu 1##EU362990|OPRM1|4988|opioid receptor, mu 1##NM_001145287|OPRM1|4988|opioid receptor, mu 1	0.998469	CTCF.p2:12:0.998
chr6	36646439	36646537	reg1037252.p1	3.453	+	NM_000389 TSC_hg19_v1_chr6_+_36646486 AK309512 NM_001220778 U09579	-17	+	NM_001220777 NM_078467	-2237	+	TSC_hg19_v1_chr6_+_36562140 AK304097 D28423 BC000914 BC069018 AF107405	-84308	+	TSC_hg19_v1_chr6_+_36646490 BC013967 AB209881 BC001935 BC000312 L25610 L26165 U03106 S67388 BC000275 L47232 L47233 AY008263	37	+	AK125083 TSC_hg19_v1_chr6_+_36665627	19140	+	TSC_hg19_v1_chr6_-_36807217 NM_020939	160730	-	NM_000389|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK309512|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_001220778|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U09579|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_001220777|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_078467|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK304097|SRSF3|6428|serine/arginine-rich splicing factor 3##BC000914|SRSF3|6428|serine/arginine-rich splicing factor 3##BC069018|SRSF3|6428|serine/arginine-rich splicing factor 3##AF107405|SRSF3|6428|serine/arginine-rich splicing factor 3##BC013967|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AB209881|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC001935|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000312|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L25610|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L26165|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U03106|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##S67388|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000275|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47232|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47233|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK125083|RAB44|401258|RAB44, member RAS oncogene family##NM_020939|CPNE5|57699|copine V	0.147716	
chrX	118819306	118819375	reg1038703.p1	3.453	+	BC047878 BC068514 BC040379 AY208891 NM_001173487 NM_017544	-79512	-	EF165090 EF165091 EF165093 AJ011812 EF158333 EF216688 EF216689 NM_001173488	-92358	-	BC042021 NM_181777	-105043	+	D50918 AB384441 CU679289 CU680116 CU690318 TSC_hg19_v1_chrX_-_118827108 BC069231	7745	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	7792	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	7839	-	BC047878|NKRF|55922|NFKB repressing factor##BC068514|NKRF|55922|NFKB repressing factor##BC040379|NKRF|55922|NFKB repressing factor##AY208891|NKRF|55922|NFKB repressing factor##NM_001173487|NKRF|55922|NFKB repressing factor##NM_017544|NKRF|55922|NFKB repressing factor##EF165090|NKRF|55922|NFKB repressing factor##EF165091|NKRF|55922|NFKB repressing factor##EF165093|NKRF|55922|NFKB repressing factor##AJ011812|NKRF|55922|NFKB repressing factor##EF158333|NKRF|55922|NFKB repressing factor##EF216688|NKRF|55922|NFKB repressing factor##EF216689|NKRF|55922|NFKB repressing factor##NM_001173488|NKRF|55922|NFKB repressing factor##BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D50918|SEPT6|23157|septin 6##BC069231|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6	0.0	
chr10	121202221	121202294	reg1042276.p1	3.452	+	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-234996	+	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	-263910	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	-263954	-	NM_002925	93787	-	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	99933	-	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	153851	-	BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.0	
chr1	175094291	175094471	reg1002117.p1	3.452	+	AK127044 NM_022093	-57388	+	TSC_hg19_v1_chr1_-_174992572 BC009788 AK310915 AK311759 AL049705 NM_022100	-101810	-	TSC_hg19_v1_chr1_+_174969165 BC005865 AK294042 AF314752 BC022352 AL035305 AF057356 BC067823 BC078151 AF275803 AY423723	-125171	+	D25539 BC032361 BC111699 BC050374 BC008952 BC020789 AL049799 AK292691 NM_001162895 NM_014656 AL049800 NM_001162893 NM_001162894	67649	-	AK295823 TSC_hg19_v1_chr1_-_175712727 NM_003285	618329	-	AF508940 AY509921 TSC_hg19_v1_chr1_-_176176215	1081784	-	AK127044|TNN|63923|tenascin N##NM_022093|TNN|63923|tenascin N##BC009788|MRPS14|63931|mitochondrial ribosomal protein S14##AK310915|MRPS14|63931|mitochondrial ribosomal protein S14##AK311759|MRPS14|63931|mitochondrial ribosomal protein S14##AL049705|MRPS14|63931|mitochondrial ribosomal protein S14##NM_022100|MRPS14|63931|mitochondrial ribosomal protein S14##AK294042|CACYBP|27101|calcyclin binding protein##AF314752|CACYBP|27101|calcyclin binding protein##BC022352|CACYBP|27101|calcyclin binding protein##AL035305|CACYBP|27101|calcyclin binding protein##AF057356|CACYBP|27101|calcyclin binding protein##BC067823|CACYBP|27101|calcyclin binding protein##BC078151|CACYBP|27101|calcyclin binding protein##AF275803|CACYBP|27101|calcyclin binding protein##AY423723|CACYBP|27101|calcyclin binding protein##D25539|KIAA0040|9674|KIAA0040##BC032361|KIAA0040|9674|KIAA0040##BC111699|KIAA0040|9674|KIAA0040##BC050374|KIAA0040|9674|KIAA0040##BC020789|KIAA0040|9674|KIAA0040##AL049799|KIAA0040|9674|KIAA0040##AK292691|KIAA0040|9674|KIAA0040##NM_001162895|KIAA0040|9674|KIAA0040##NM_014656|KIAA0040|9674|KIAA0040##AL049800|KIAA0040|9674|KIAA0040##NM_001162893|KIAA0040|9674|KIAA0040##NM_001162894|KIAA0040|9674|KIAA0040##AK295823|TNR|7143|tenascin R (restrictin, janusin)##NM_003285|TNR|7143|tenascin R (restrictin, janusin)##AF508940|RFWD2|64326|ring finger and WD repeat domain 2##AY509921|RFWD2|64326|ring finger and WD repeat domain 2	0.0	
chr13	105783635	105783712	reg1041921.p2	3.452	+	NM_000452 U10417	-2064478	-	TSC_hg19_v1_chr13_+_103498385 BX647399 AK303558 X69978 AK299758 L20046 D16305 CU689168 DQ891818 DQ895006	-2285187	+	AK294708 TSC_hg19_v1_chr13_+_103498254	-2285419	+	AY138547 NM_001161814 DQ343761 NM_172370 AY223901 AY170469 AY170470	334631	+	NM_001161812 AY138546 BC121090 BC121091 DQ357223 DQ386869 DQ386870	334918	+	CU686759 BC069342 BC074856 BC074857 U16797 U81262 AB529075 TSC_hg19_v1_chr13_-_107187325 BC105955 BC105956 BC105957 L38734 NM_004093	1403676	-	NM_000452|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##U10417|SLC10A2|6555|solute carrier family 10 (sodium/bile acid cotransporter family), member 2##BX647399|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK303558|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##X69978|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK299758|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##L20046|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##D16305|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ891818|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##DQ895006|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AK294708|ERCC5|2073|excision repair cross-complementing rodent repair deficiency, complementation group 5##AY138547|DAOA|267012|D-amino acid oxidase activator##NM_001161814|DAOA|267012|D-amino acid oxidase activator##DQ343761|DAOA|267012|D-amino acid oxidase activator##NM_172370|DAOA|267012|D-amino acid oxidase activator##AY223901|DAOA|267012|D-amino acid oxidase activator##AY170469|DAOA|267012|D-amino acid oxidase activator##AY170470|DAOA|267012|D-amino acid oxidase activator##NM_001161812|DAOA|267012|D-amino acid oxidase activator##AY138546|DAOA|267012|D-amino acid oxidase activator##BC121090|DAOA|267012|D-amino acid oxidase activator##BC121091|DAOA|267012|D-amino acid oxidase activator##DQ357223|DAOA|267012|D-amino acid oxidase activator##DQ386869|DAOA|267012|D-amino acid oxidase activator##DQ386870|DAOA|267012|D-amino acid oxidase activator##BC069342|EFNB2|1948|ephrin-B2##BC074856|EFNB2|1948|ephrin-B2##BC074857|EFNB2|1948|ephrin-B2##U16797|EFNB2|1948|ephrin-B2##U81262|EFNB2|1948|ephrin-B2##BC105955|EFNB2|1948|ephrin-B2##BC105956|EFNB2|1948|ephrin-B2##BC105957|EFNB2|1948|ephrin-B2##L38734|EFNB2|1948|ephrin-B2##NM_004093|EFNB2|1948|ephrin-B2	0.0	
chr14	65637817	65637906	reg1033656.p2	3.452	+	TSC_hg19_v1_chr14_-_65569238 BC013669 NM_002382 NM_145112 NM_145113 NM_145114 NM_145116 NM_197957 AK290929 AL833643	-68623	-	AB463901 AY353088 CR542191 CU693010 X60287 M64240 AK292630 AK292189 BC003525 BC004516 AK290130 TSC_hg19_v1_chr14_-_65569205 BC036092 BC027924 BC025685	-68729	-	BC035148 BC052775 TSC_hg19_v1_chr14_+_65453967	-183895	+	AJ536056 NM_004480 NM_178155 NM_178156	239448	+	TSC_hg19_v1_chr14_+_65878582 BC142958 AK292413 AK294242 Y17976 Y17977	240759	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	241465	-	BC013669|MAX|4149|MYC associated factor X##NM_002382|MAX|4149|MYC associated factor X##NM_145112|MAX|4149|MYC associated factor X##NM_145113|MAX|4149|MYC associated factor X##NM_145114|MAX|4149|MYC associated factor X##NM_145116|MAX|4149|MYC associated factor X##NM_197957|MAX|4149|MYC associated factor X##AK290929|MAX|4149|MYC associated factor X##AL833643|MAX|4149|MYC associated factor X##AY353088|MAX|4149|MYC associated factor X##CR542191|MAX|4149|MYC associated factor X##X60287|MAX|4149|MYC associated factor X##M64240|MAX|4149|MYC associated factor X##AK292630|MAX|4149|MYC associated factor X##AK292189|MAX|4149|MYC associated factor X##BC003525|MAX|4149|MYC associated factor X##BC004516|MAX|4149|MYC associated factor X##AK290130|MAX|4149|MYC associated factor X##BC036092|MAX|4149|MYC associated factor X##BC027924|MAX|4149|MYC associated factor X##BC025685|MAX|4149|MYC associated factor X##AJ536056|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_004480|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178155|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##NM_178156|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC142958|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK292413|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##AK294242|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17976|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17977|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431	0.980857	CTCF.p2:2:0.981
chr17	21118062	21118243	reg1036789.p2	3.452	+	TSC_hg19_v1_chr17_-_21117911 BC005268 NM_003876	-247	-	TSC_hg19_v1_chr17_-_21117651 X51804	-476	-	TSC_hg19_v1_chr17_-_21117480 BC002819	-664	-	AK126856 NM_152914 BC029527 TSC_hg19_v1_chr17_-_21156754	38514	-	NM_145109 TSC_hg19_v1_chr17_+_21188018	69840	+	TSC_hg19_v1_chr17_+_21188022 AK315505	69872	+	BC005268|TMEM11|8834|transmembrane protein 11##NM_003876|TMEM11|8834|transmembrane protein 11##X51804|TMEM11|8834|transmembrane protein 11##BC002819|TMEM11|8834|transmembrane protein 11##AK126856|C17orf103|256302|chromosome 17 open reading frame 103##NM_152914|C17orf103|256302|chromosome 17 open reading frame 103##BC029527|C17orf103|256302|chromosome 17 open reading frame 103##NM_145109|MAP2K3|5606|mitogen-activated protein kinase kinase 3##AK315505|MAP2K3|5606|mitogen-activated protein kinase kinase 3	0.0	
chr17	9916864	9916935	reg1040977.p2	3.452	+	AJ224876 NM_003644 AK293834 AK315162	-54128	-	AB001838 BT009838 AB528320 DQ892822 DQ896068 BC001720 S62028 S45545 AB593156 NM_002903 S43855	-108310	-	TSC_hg19_v1_chr17_+_9745847 BC041176 BC019818	-171040	+	AB385324 BT006891 DQ892802 DQ895910 CU674584 AB209030 AK294829 TSC_hg19_v1_chr17_-_9923322	6364	-	TSC_hg19_v1_chr17_-_9923331 AK309722	6493	-	TSC_hg19_v1_chr17_-_9929603 AB007854 AK225165 AK299574 NM_001130831	12722	-	AJ224876|GAS7|8522|growth arrest-specific 7##NM_003644|GAS7|8522|growth arrest-specific 7##AK293834|GAS7|8522|growth arrest-specific 7##AK315162|GAS7|8522|growth arrest-specific 7##AB001838|RCVRN|5957|recoverin##BT009838|RCVRN|5957|recoverin##DQ892822|RCVRN|5957|recoverin##DQ896068|RCVRN|5957|recoverin##BC001720|RCVRN|5957|recoverin##S62028|RCVRN|5957|recoverin##S45545|RCVRN|5957|recoverin##AB593156|RCVRN|5957|recoverin##NM_002903|RCVRN|5957|recoverin##S43855|RCVRN|5957|recoverin##BC041176|GLP2R|9340|glucagon-like peptide 2 receptor##BC019818|GLP2R|9340|glucagon-like peptide 2 receptor##BT006891|GAS7|8522|growth arrest-specific 7##DQ892802|GAS7|8522|growth arrest-specific 7##DQ895910|GAS7|8522|growth arrest-specific 7##AB209030|GAS7|8522|growth arrest-specific 7##AK294829|GAS7|8522|growth arrest-specific 7##AK309722|GAS7|8522|growth arrest-specific 7##AB007854|GAS7|8522|growth arrest-specific 7##AK225165|GAS7|8522|growth arrest-specific 7##AK299574|GAS7|8522|growth arrest-specific 7##NM_001130831|GAS7|8522|growth arrest-specific 7	0.0	
chr19	58514126	58514236	reg1043331.p1	3.452	+	TSC_hg19_v1_chr19_-_58514188 BC022533 BC036570 AK293097 AK056696 AK294037 BC037209	-10	-	AK094748 TSC_hg19_v1_chr19_+_58513574	-679	+	BC033933 NM_152474	-28280	-	AB058755 NM_025027	532	-	BC107729 AK091098 AX746779 NM_182572 AY280370 BC048099	31255	+	AK098011 NM_001164527 NM_001164529 NM_001164530 NM_003436 NM_007134 TSC_hg19_v1_chr19_+_58570643 AK297226 BC046434 AK295110 BX647775 AK094202 AL833637	56456	+	BC022533|ZNF606|80095|zinc finger protein 606##BC036570|ZNF606|80095|zinc finger protein 606##AK293097|ZNF606|80095|zinc finger protein 606##AK056696|ZNF606|80095|zinc finger protein 606##AK294037|ZNF606|80095|zinc finger protein 606##BC037209|ZNF606|80095|zinc finger protein 606##AK094748|LOC100128398|100128398|uncharacterized LOC100128398##BC033933|C19orf18|147685|chromosome 19 open reading frame 18##NM_152474|C19orf18|147685|chromosome 19 open reading frame 18##AB058755|ZNF606|80095|zinc finger protein 606##NM_025027|ZNF606|80095|zinc finger protein 606##BC107729|ZSCAN1|284312|zinc finger and SCAN domain containing 1##AK091098|ZSCAN1|284312|zinc finger and SCAN domain containing 1##NM_182572|ZSCAN1|284312|zinc finger and SCAN domain containing 1##AY280370|ZSCAN1|284312|zinc finger and SCAN domain containing 1##BC048099|ZSCAN1|284312|zinc finger and SCAN domain containing 1##AK098011|ZNF135|7694|zinc finger protein 135##NM_001164527|ZNF135|7694|zinc finger protein 135##NM_001164529|ZNF135|7694|zinc finger protein 135##NM_001164530|ZNF135|7694|zinc finger protein 135##NM_003436|ZNF135|7694|zinc finger protein 135##NM_007134|ZNF135|7694|zinc finger protein 135##AK297226|ZNF135|7694|zinc finger protein 135##BC046434|ZNF135|7694|zinc finger protein 135##AK295110|ZNF135|7694|zinc finger protein 135##BX647775|ZNF135|7694|zinc finger protein 135##AK094202|ZNF135|7694|zinc finger protein 135##AL833637|ZNF135|7694|zinc finger protein 135	0.0	
chr2	65782348	65782439	reg1039078.p1	3.452	+	TSC_hg19_v1_chr2_+_65663818 AK131224 BC033059	-118556	+	TSC_hg19_v1_chr2_-_65659661 BC111495 NM_181784	-122717	-	AK307714 AB590946 HQ258249 TSC_hg19_v1_chr2_-_65659192 AK056479 BC130292 BC136334 AY299090	-123181	-	AL832770 BC043503 NM_002398	880130	+	BC036511 AK314949 TSC_hg19_v1_chr2_+_66662903 U85707 AB527915	880447	+	TSC_hg19_v1_chr2_+_66666452 AK297109	884057	+	AK131224|FLJ16124|440867|FLJ16124 protein##BC033059|FLJ16124|440867|FLJ16124 protein##BC111495|SPRED2|200734|sprouty-related, EVH1 domain containing 2##NM_181784|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK307714|SPRED2|200734|sprouty-related, EVH1 domain containing 2##HQ258249|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AK056479|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC130292|SPRED2|200734|sprouty-related, EVH1 domain containing 2##BC136334|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AY299090|SPRED2|200734|sprouty-related, EVH1 domain containing 2##AL832770|MEIS1|4211|Meis homeobox 1##BC043503|MEIS1|4211|Meis homeobox 1##NM_002398|MEIS1|4211|Meis homeobox 1##BC036511|MEIS1|4211|Meis homeobox 1##AK314949|MEIS1|4211|Meis homeobox 1##U85707|MEIS1|4211|Meis homeobox 1##AK297109|MEIS1|4211|Meis homeobox 1	0.0	
chr2	87642008	87642135	reg1034684.p2	3.452	+	TSC_hg19_v1_chr2_-_87303546 BC132791 BC132793 BC030543 BC011756 BC013972 BC033072	-338739	-	BC107767 BC109248 BC070296 BC005379 NM_001032392 M93143 NM_002665 BC022294	-393113	-	CR749330 NM_001024457	-497334	+	TSC_hg19_v1_chr2_+_87755000 BC009508 BC073906	112946	+	TSC_hg19_v1_chr2_+_87755060 AK312010	112989	+	BC022294 M93143 NM_002665 BC005379 NM_001032392 BC070296 BC109248 BC107767	405548	+	BC132791|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC132793|LOC285074|285074|anaphase promoting complex subunit 1 pseudogene##BC107767|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC022294|PLGLB2|5342|plasminogen-like B2##CR749330|RGPD1|400966|RANBP2-like and GRIP domain containing 1##NM_001024457|RGPD1|400966|RANBP2-like and GRIP domain containing 1##BC009508|LINC00152|112597|long intergenic non-protein coding RNA 152##BC073906|LINC00152|112597|long intergenic non-protein coding RNA 152##AK312010|LINC00152|112597|long intergenic non-protein coding RNA 152##BC022294|PLGLB2|5342|plasminogen-like B2##M93143|PLGLB2|5342|plasminogen-like B2##NM_002665|PLGLB2|5342|plasminogen-like B2##BC005379|PLGLB2|5342|plasminogen-like B2##NM_001032392|PLGLB1|5343|plasminogen-like B1##BC070296|PLGLB1|5343|plasminogen-like B1##BC109248|PLGLB1|5343|plasminogen-like B1##BC107767|PLGLB1|5343|plasminogen-like B1	0.0	
chr3	63897256	63897411	reg1039354.p1	3.452	+	NM_001177387	-13259	+	TSC_hg19_v1_chr3_+_63850212 AF032104 AF032105 NM_000333 AJ000517	-47125	+	TSC_hg19_v1_chr3_-_63849703 AK027098 AF104914 NM_025075	-47677	-	NM_001128149 AK310745 AK304062	56124	+	AF530062 AB463196 TSC_hg19_v1_chr3_-_64009149 BC000630 AK095059 AY568086 D14663 NM_014814 BC012369 BC000904 AK290205 BX647742 AF215935	111817	-	BC119002 AL833539 NM_198859	313787	-	NM_001177387|ATXN7|6314|ataxin 7##AF032104|ATXN7|6314|ataxin 7##AF032105|ATXN7|6314|ataxin 7##NM_000333|ATXN7|6314|ataxin 7##AJ000517|ATXN7|6314|ataxin 7##AK027098|THOC7|80145|THO complex 7 homolog (Drosophila)##AF104914|THOC7|80145|THO complex 7 homolog (Drosophila)##NM_025075|THOC7|80145|THO complex 7 homolog (Drosophila)##NM_001128149|ATXN7|6314|ataxin 7##AK310745|ATXN7|6314|ataxin 7##AK304062|ATXN7|6314|ataxin 7##AF530062|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000630|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK095059|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AY568086|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##D14663|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##NM_014814|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC012369|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC000904|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AK290205|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BX647742|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##AF215935|PSMD6|9861|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6##BC119002|PRICKLE2|166336|prickle homolog 2 (Drosophila)##AL833539|PRICKLE2|166336|prickle homolog 2 (Drosophila)##NM_198859|PRICKLE2|166336|prickle homolog 2 (Drosophila)	0.0	
chr6	10521797	10521901	reg1038565.p2	3.452	+	AK307373 NM_145649 AK291767 AK310216 AL832714	-241	+	AK296737 NM_001042425	-102058	-	BC071713 NM_003220 TSC_hg19_v1_chr6_-_10415496	-106381	-	NM_001491	34099	+	AK313426 BX647668 NM_145655 BX647576 AL832719 BC130524	64165	+	BC016820 NM_001145020	172988	-	AK307373|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145649|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK291767|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK310216|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832714|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK296737|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001042425|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##BC071713|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_003220|TFAP2A|7020|transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)##NM_001491|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AK313426|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647668|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##NM_145655|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BX647576|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##AL832719|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BC130524|GCNT2|2651|glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)##BC016820|C6orf52|347744|chromosome 6 open reading frame 52##NM_001145020|C6orf52|347744|chromosome 6 open reading frame 52	0.0	
chr7	73625500	73625617	reg1038731.p2	3.452	+	TSC_hg19_v1_chr7_+_73624361 AF252613	-1204	+	TSC_hg19_v1_chr7_+_73624338 AF161531 AF252611 AF252612 AF252614 AK225150 AK290074 AK290916	-1222	+	TSC_hg19_v1_chr7_+_73624283 BC001609 AK002099 BC006080	-1276	+	TSC_hg19_v1_chr7_-_73668718 AB451243 AB451368 AB464141 BT007058 BC002813	43153	-	TSC_hg19_v1_chr7_-_73668740 NM_002914 NM_181471	43178	-	TSC_hg19_v1_chr7_+_73703766 AB006629 BC150332 NM_003388 NM_032421	78229	+	AF252613|LAT2|7462|linker for activation of T cells family, member 2##AF161531|LAT2|7462|linker for activation of T cells family, member 2##AF252611|LAT2|7462|linker for activation of T cells family, member 2##AF252612|LAT2|7462|linker for activation of T cells family, member 2##AF252614|LAT2|7462|linker for activation of T cells family, member 2##AK225150|LAT2|7462|linker for activation of T cells family, member 2##AK290074|LAT2|7462|linker for activation of T cells family, member 2##AK290916|LAT2|7462|linker for activation of T cells family, member 2##BC001609|LAT2|7462|linker for activation of T cells family, member 2##AK002099|LAT2|7462|linker for activation of T cells family, member 2##BC006080|LAT2|7462|linker for activation of T cells family, member 2##AB451243|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB451368|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BT007058|RFC2|5982|replication factor C (activator 1) 2, 40kDa##BC002813|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_002914|RFC2|5982|replication factor C (activator 1) 2, 40kDa##NM_181471|RFC2|5982|replication factor C (activator 1) 2, 40kDa##AB006629|CLIP2|7461|CAP-GLY domain containing linker protein 2##BC150332|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_003388|CLIP2|7461|CAP-GLY domain containing linker protein 2##NM_032421|CLIP2|7461|CAP-GLY domain containing linker protein 2	0.083904	
chr8	129005520	129005617	reg1037383.p1	3.452	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-198785	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-257078	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-257243	+	AB042405 NM_031415	1793565	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1946347	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1946438	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr9	109515879	109515945	reg1041141.p2	3.452	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-1058994	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	-1059059	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	-1091155	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	109452	+	TSC_hg19_v1_chr9_+_109686439 CR749850	170557	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	529620	+	AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##CR749850|ZNF462|58499|zinc finger protein 462##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.0	
chr1	203142861	203142955	reg1038213.p2	3.451	+	TSC_hg19_v1_chr1_+_203097427 AK295584 AK308733 AK293647 AK316106	-45463	+	AK289928 NM_000674 NM_001048230 AK095060 BC026340	-46061	+	NM_002479	-87532	-	L05606 BC044226 NM_004997 TSC_hg19_v1_chr1_-_203144955	2024	-	AB209459 TSC_hg19_v1_chr1_-_203154361	11426	-	TSC_hg19_v1_chr1_-_203155807 BT007223 CU678995 DQ890777 DQ893937 EU831608 EU831695 BC038354	12869	-	AK295584|ADORA1|134|adenosine A1 receptor##AK308733|ADORA1|134|adenosine A1 receptor##AK289928|ADORA1|134|adenosine A1 receptor##NM_000674|ADORA1|134|adenosine A1 receptor##NM_001048230|ADORA1|134|adenosine A1 receptor##AK095060|ADORA1|134|adenosine A1 receptor##BC026340|ADORA1|134|adenosine A1 receptor##NM_002479|MYOG|4656|myogenin (myogenic factor 4)##L05606|MYBPH|4608|myosin binding protein H##BC044226|MYBPH|4608|myosin binding protein H##NM_004997|MYBPH|4608|myosin binding protein H##AB209459|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BT007223|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ890777|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ893937|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##EU831608|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##EU831695|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##BC038354|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)	0.0	
chr1	234862930	234863065	reg1036689.p1	3.451	+	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-117751	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-119139	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-119166	-	TSC_hg19_v1_chr1_-_234895746 AF193050	32777	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	429092	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	429234	-	BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.0	
chr12	6677575	6677654	reg1032268.p2	3.451	+	TSC_hg19_v1_chr12_-_6677453 BC000656 BC065257 AK129852 BC106072 BC082985 BC128183 BC128184 AK056208 AK307582 NM_001033714 NM_006170	-148	-	TSC_hg19_v1_chr12_-_6665250 BC001790 BC010431 BC023664 BC110387 NM_001039670 NM_001193457 NM_080730	-12356	-	M36164 TSC_hg19_v1_chr12_+_6647482	-30197	+	CR936680 EU446505 TSC_hg19_v1_chr12_-_6715604	37954	-	X86691 TSC_hg19_v1_chr12_-_6716523 BC014964 BC025962 BC038596	38887	-	AK128741 NM_001273 TSC_hg19_v1_chr12_-_6716562	38942	-	BC000656|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC065257|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK129852|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC106072|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC082985|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC128183|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC128184|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK056208|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##AK307582|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##NM_001033714|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##NM_006170|NOP2|4839|NOP2 nucleolar protein homolog (yeast)##BC001790|IFFO1|25900|intermediate filament family orphan 1##BC010431|IFFO1|25900|intermediate filament family orphan 1##BC023664|IFFO1|25900|intermediate filament family orphan 1##BC110387|IFFO1|25900|intermediate filament family orphan 1##NM_001039670|IFFO1|25900|intermediate filament family orphan 1##NM_001193457|IFFO1|25900|intermediate filament family orphan 1##NM_080730|IFFO1|25900|intermediate filament family orphan 1##M36164|GAPDH|2597|glyceraldehyde-3-phosphate dehydrogenase##CR936680|CHD4|1108|chromodomain helicase DNA binding protein 4##EU446505|CHD4|1108|chromodomain helicase DNA binding protein 4##X86691|CHD4|1108|chromodomain helicase DNA binding protein 4##BC014964|CHD4|1108|chromodomain helicase DNA binding protein 4##BC025962|CHD4|1108|chromodomain helicase DNA binding protein 4##BC038596|CHD4|1108|chromodomain helicase DNA binding protein 4##AK128741|CHD4|1108|chromodomain helicase DNA binding protein 4##NM_001273|CHD4|1108|chromodomain helicase DNA binding protein 4	0.045443	
chr15	78977362	78977434	reg1039230.p1	3.451	+	TSC_hg19_v1_chr15_-_78933573 U62439 Y08416 BC096080 BC096081 BC096082 BC096083 NM_000750 U48861	-43825	-	TSC_hg19_v1_chr15_-_78913532 BC098443 BC006114 NM_000743 NM_001166694	-63826	-	AF385584 Y08418 BT006646 BT006897 CU674246 CU675253 M86383 M37981 TSC_hg19_v1_chr15_-_78913298 BC000513 BC001642 BC002996 U62432	-64165	-	TSC_hg19_v1_chr15_+_79102818 AK095823	125429	+	AY327122 AF140675 TSC_hg19_v1_chr15_-_79103698 BC061631 NM_014272 AK299844	126352	-	TSC_hg19_v1_chr15_+_79165157 NM_006791 NM_206839	187776	+	U62439|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##Y08416|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096080|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096081|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096082|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC096083|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##NM_000750|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##U48861|CHRNB4|1143|cholinergic receptor, nicotinic, beta 4##BC098443|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC006114|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_000743|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##NM_001166694|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AF385584|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##Y08418|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006646|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BT006897|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##M37981|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC000513|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC001642|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##BC002996|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##U62432|CHRNA3|1136|cholinergic receptor, nicotinic, alpha 3##AK095823|MORF4L1|10933|mortality factor 4 like 1##AY327122|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AF140675|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##BC061631|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_014272|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##AK299844|ADAMTS7|11173|ADAM metallopeptidase with thrombospondin type 1 motif, 7##NM_006791|MORF4L1|10933|mortality factor 4 like 1##NM_206839|MORF4L1|10933|mortality factor 4 like 1	0.0	
chr15	99993255	99993435	reg1037889.p1	3.451	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-201703	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-201929	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-203639	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	112808	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	112849	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	112890	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.0	
chr1	6094582	6094752	reg1039182.p2	3.451	+	AK124696 NM_001199860	-323	+	TSC_hg19_v1_chr1_+_6086432 BC126424 BC130413	-8220	+	TSC_hg19_v1_chr1_+_6086392 BC110351 AK312871	-8280	+	AK131252 NM_001199862	11313	+	AK315858 NM_001199863	11506	+	AK127046 AB527126 AF425231 NM_015557 TSC_hg19_v1_chr1_-_6240331	145540	-	AK124696|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199860|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##BC126424|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##BC130413|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##BC110351|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK312871|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK131252|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199862|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK315858|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##NM_001199863|KCNAB2|8514|potassium voltage-gated channel, shaker-related subfamily, beta member 2##AK127046|CHD5|26038|chromodomain helicase DNA binding protein 5##AF425231|CHD5|26038|chromodomain helicase DNA binding protein 5##NM_015557|CHD5|26038|chromodomain helicase DNA binding protein 5	0.0	
chr16	30905640	30905820	reg1021055.p2	3.451	+	TSC_hg19_v1_chr16_-_30905474 BC058863	-194	-	TSC_hg19_v1_chr16_-_30905377 BC019071 NM_004765	-335	-	BC010017 AJ223980 CU691314 TSC_hg19_v1_chr16_-_30905327	-429	-	BC064416 NM_001142544 NM_001330 U43030 TSC_hg19_v1_chr16_+_30907950 BC049822 BC036787	2212	+	TSC_hg19_v1_chr16_-_30934469 BC101464 BC101988 BC105687 BC105926 AK092263 AX747439	28783	-	AK302669 NM_001099784	30165	+	BC058863|BCL7C|9274|B-cell CLL/lymphoma 7C##BC019071|BCL7C|9274|B-cell CLL/lymphoma 7C##NM_004765|BCL7C|9274|B-cell CLL/lymphoma 7C##AJ223980|BCL7C|9274|B-cell CLL/lymphoma 7C##BC064416|CTF1|1489|cardiotrophin 1##NM_001142544|CTF1|1489|cardiotrophin 1##NM_001330|CTF1|1489|cardiotrophin 1##U43030|CTF1|1489|cardiotrophin 1##BC049822|CTF1|1489|cardiotrophin 1##BC036787|CTF1|1489|cardiotrophin 1##BC101464|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC101988|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC105687|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##BC105926|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##AK092263|FBXL19-AS1|283932|FBXL19 antisense RNA 1 (non-protein coding)##AK302669|FBXL19|54620|F-box and leucine-rich repeat protein 19##NM_001099784|FBXL19|54620|F-box and leucine-rich repeat protein 19	0.0	
chr20	4500328	4500423	reg1041823.p2	3.451	+	TSC_hg19_v1_chr20_-_4229520 L31772 NM_000678 U03864 S70782	-270785	-	TSC_hg19_v1_chr20_+_4129505 AK293485 BC000669 AF519179 AY033889 AY033890 AY033891 EF032141	-370852	+	TSC_hg19_v1_chr20_+_4129438 NM_175839 NM_175840 NM_175841 NM_175842	-370940	+	NM_000311 NM_001080121 NM_001080122 NM_183079 TSC_hg19_v1_chr20_+_4667101 X82545 AK090575 AK293312 AK295415 AK295943 AK312276 AX746518 BC014544 BC022532 BC012844 M13899 AY008282 NM_001080123	166601	+	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	202159	+	AY154472 NM_170774	295393	-	L31772|ADRA1D|146|adrenergic, alpha-1D-, receptor##NM_000678|ADRA1D|146|adrenergic, alpha-1D-, receptor##U03864|ADRA1D|146|adrenergic, alpha-1D-, receptor##S70782|ADRA1D|146|adrenergic, alpha-1D-, receptor##AK293485|SMOX|54498|spermine oxidase##BC000669|SMOX|54498|spermine oxidase##AF519179|SMOX|54498|spermine oxidase##AY033889|SMOX|54498|spermine oxidase##AY033890|SMOX|54498|spermine oxidase##AY033891|SMOX|54498|spermine oxidase##EF032141|SMOX|54498|spermine oxidase##NM_175839|SMOX|54498|spermine oxidase##NM_175840|SMOX|54498|spermine oxidase##NM_175841|SMOX|54498|spermine oxidase##NM_175842|SMOX|54498|spermine oxidase##NM_000311|PRNP|5621|prion protein##NM_001080121|PRNP|5621|prion protein##NM_001080122|PRNP|5621|prion protein##NM_183079|PRNP|5621|prion protein##AK090575|PRNP|5621|prion protein##AK293312|PRNP|5621|prion protein##AK295415|PRNP|5621|prion protein##AK295943|PRNP|5621|prion protein##AK312276|PRNP|5621|prion protein##BC014544|PRNP|5621|prion protein##BC022532|PRNP|5621|prion protein##BC012844|PRNP|5621|prion protein##M13899|PRNP|5621|prion protein##AY008282|PRNP|5621|prion protein##NM_001080123|PRNP|5621|prion protein##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2	0.226502	CTCF.p2:10:0.227
chr21	44255602	44255706	reg1038531.p2	3.451	+	TSC_hg19_v1_chr21_+_44073730 NM_001001567 NM_001001568 NM_001001569 NM_001001570 NM_001001571 NM_001001572 NM_001001573 NM_001001574 NM_001001575 NM_001001576 NM_001001577 NM_001001578 NM_001001579 NM_001001580 NM_001001581 NM_001001582 NM_001001583 NM_001001584 NM_001001585 NM_002606 AF048837 AY701187 BC009047 AK314679 AY196299 AY196300 AY196301 AY196302 AY196303 AY196304 AY196305 AY196306 AY196307 AY196308 AY196309 AY196310 AY196311 AY196312 AY196313 AY196314 AK001307 AK294112 AF067223 AF067224 AF067225 AF067226 AB527758 AY242121 BT007016 GQ129331 GQ129332	-181867	+	TSC_hg19_v1_chr21_+_43933984 BC042139 AF311320	-321651	+	AJ269529 NM_018964	-335913	+	AB590172 CU675357 DQ892967 DQ896215 TSC_hg19_v1_chr21_-_44299643 AK292923 AK315008 AJ243912 AJ243913 BC006341	43970	-	TSC_hg19_v1_chr21_-_44299690 BC001074 NM_018669 NM_033661 AK298015	44030	-	TSC_hg19_v1_chr21_+_44313422 NM_001001503 NM_021075 BC054016 BC021217 AK308228 AK289586 BC033766 CU676876 CU689730 CR542174 CR542190	57747	+	NM_001001567|PDE9A|5152|phosphodiesterase 9A##NM_001001568|PDE9A|5152|phosphodiesterase 9A##NM_001001569|PDE9A|5152|phosphodiesterase 9A##NM_001001570|PDE9A|5152|phosphodiesterase 9A##NM_001001571|PDE9A|5152|phosphodiesterase 9A##NM_001001572|PDE9A|5152|phosphodiesterase 9A##NM_001001573|PDE9A|5152|phosphodiesterase 9A##NM_001001574|PDE9A|5152|phosphodiesterase 9A##NM_001001575|PDE9A|5152|phosphodiesterase 9A##NM_001001576|PDE9A|5152|phosphodiesterase 9A##NM_001001577|PDE9A|5152|phosphodiesterase 9A##NM_001001578|PDE9A|5152|phosphodiesterase 9A##NM_001001579|PDE9A|5152|phosphodiesterase 9A##NM_001001580|PDE9A|5152|phosphodiesterase 9A##NM_001001581|PDE9A|5152|phosphodiesterase 9A##NM_001001582|PDE9A|5152|phosphodiesterase 9A##NM_001001583|PDE9A|5152|phosphodiesterase 9A##NM_001001584|PDE9A|5152|phosphodiesterase 9A##NM_001001585|PDE9A|5152|phosphodiesterase 9A##NM_002606|PDE9A|5152|phosphodiesterase 9A##AF048837|PDE9A|5152|phosphodiesterase 9A##AY701187|PDE9A|5152|phosphodiesterase 9A##BC009047|PDE9A|5152|phosphodiesterase 9A##AK314679|PDE9A|5152|phosphodiesterase 9A##AY196299|PDE9A|5152|phosphodiesterase 9A##AY196300|PDE9A|5152|phosphodiesterase 9A##AY196301|PDE9A|5152|phosphodiesterase 9A##AY196302|PDE9A|5152|phosphodiesterase 9A##AY196303|PDE9A|5152|phosphodiesterase 9A##AY196304|PDE9A|5152|phosphodiesterase 9A##AY196305|PDE9A|5152|phosphodiesterase 9A##AY196306|PDE9A|5152|phosphodiesterase 9A##AY196307|PDE9A|5152|phosphodiesterase 9A##AY196308|PDE9A|5152|phosphodiesterase 9A##AY196309|PDE9A|5152|phosphodiesterase 9A##AY196310|PDE9A|5152|phosphodiesterase 9A##AY196311|PDE9A|5152|phosphodiesterase 9A##AY196312|PDE9A|5152|phosphodiesterase 9A##AY196313|PDE9A|5152|phosphodiesterase 9A##AY196314|PDE9A|5152|phosphodiesterase 9A##AK001307|PDE9A|5152|phosphodiesterase 9A##AK294112|PDE9A|5152|phosphodiesterase 9A##AF067223|PDE9A|5152|phosphodiesterase 9A##AF067224|PDE9A|5152|phosphodiesterase 9A##AF067225|PDE9A|5152|phosphodiesterase 9A##AF067226|PDE9A|5152|phosphodiesterase 9A##AY242121|PDE9A|5152|phosphodiesterase 9A##BT007016|PDE9A|5152|phosphodiesterase 9A##GQ129331|PDE9A|5152|phosphodiesterase 9A##GQ129332|PDE9A|5152|phosphodiesterase 9A##BC042139|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AF311320|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##AJ269529|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##NM_018964|SLC37A1|54020|solute carrier family 37 (glycerol-3-phosphate transporter), member 1##DQ892967|WDR4|10785|WD repeat domain 4##DQ896215|WDR4|10785|WD repeat domain 4##AK292923|WDR4|10785|WD repeat domain 4##AK315008|WDR4|10785|WD repeat domain 4##AJ243912|WDR4|10785|WD repeat domain 4##AJ243913|WDR4|10785|WD repeat domain 4##BC006341|WDR4|10785|WD repeat domain 4##BC001074|WDR4|10785|WD repeat domain 4##NM_018669|WDR4|10785|WD repeat domain 4##NM_033661|WDR4|10785|WD repeat domain 4##AK298015|WDR4|10785|WD repeat domain 4##NM_001001503|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##NM_021075|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC054016|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC021217|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK308228|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##AK289586|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##BC033766|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542174|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa##CR542190|NDUFV3|4731|NADH dehydrogenase (ubiquinone) flavoprotein 3, 10kDa	0.0	
chr2	213551356	213551536	reg1004012.p2	3.451	+	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	-148131	-	AK316425 NM_001122634 AK302778 AY317138	-2093361	+	NM_001875 TSC_hg19_v1_chr2_+_211421324 AK289749 BC020695 BC058010 AF154830 D90282 BC140943 AB384735 AB180933 AB180934 AB180935 AB180936 AB180937 AB180938 Y15793	-2130057	+	AK301503 AF130863 NM_016260	463609	-	BC028936 NM_001079526	464886	-	AK124960 NM_001242575	597482	-	BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK316425|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001122634|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK302778|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AY317138|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##NM_001875|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK289749|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC020695|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC058010|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AF154830|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##D90282|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##BC140943|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180933|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180934|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180935|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180936|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180937|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AB180938|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##Y15793|CPS1|1373|carbamoyl-phosphate synthase 1, mitochondrial##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451	0.0	
chr2	231839099	231839210	reg1027967.p2	3.451	+	BC032694 NM_005683	-49214	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-109432	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-109476	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	21738	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	63083	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	82423	+	BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.0	
chr3	167211166	167211274	reg1043792.p1	3.451	+	AK226025 AB006423 NM_006217 AK293391	-19400	-	AK093296 AX748039 BC034229 NM_001199202 NM_001199201 NM_024687	-113143	-	NM_000055 TSC_hg19_v1_chr3_-_165555283	-1655953	-	BC035512 NM_178824	160068	-	TSC_hg19_v1_chr3_-_167371732 AK097556	160503	-	BC002506 NM_007217 AF022385 NM_145860 TSC_hg19_v1_chr3_-_167452681 BC016353 NM_145859 AK291130	241431	-	AK226025|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AB006423|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##NM_006217|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AK293391|SERPINI2|5276|serpin peptidase inhibitor, clade I (pancpin), member 2##AK093296|ZBBX|79740|zinc finger, B-box domain containing##BC034229|ZBBX|79740|zinc finger, B-box domain containing##NM_001199202|ZBBX|79740|zinc finger, B-box domain containing##NM_001199201|ZBBX|79740|zinc finger, B-box domain containing##NM_024687|ZBBX|79740|zinc finger, B-box domain containing##NM_000055|BCHE|590|butyrylcholinesterase##BC035512|WDR49|151790|WD repeat domain 49##NM_178824|WDR49|151790|WD repeat domain 49##AK097556|WDR49|151790|WD repeat domain 49##BC002506|PDCD10|11235|programmed cell death 10##NM_007217|PDCD10|11235|programmed cell death 10##AF022385|PDCD10|11235|programmed cell death 10##NM_145860|PDCD10|11235|programmed cell death 10##BC016353|PDCD10|11235|programmed cell death 10##NM_145859|PDCD10|11235|programmed cell death 10##AK291130|PDCD10|11235|programmed cell death 10	0.0	
chr3	44073193	44073272	reg1037644.p1	3.451	+	TSC_hg19_v1_chr3_+_43732466 NM_016006 BC021958 AK313811 AF151816 CU692422 DQ891175 DQ894357	-340811	+	TSC_hg19_v1_chr3_-_43663467 AK131223 AK295969 AK297949 AK096302 NM_001204831 NM_001204832 NM_001204833 NM_001204834 NM_018075	-409719	-	TSC_hg19_v1_chr3_-_43663446 AL832508 AK292368 BC038855	-409794	-	AK093476 AX748152 NM_001145030	210145	+	TSC_hg19_v1_chr3_+_44379620 AK292756 NM_001029840 BC009400	306398	+	TSC_hg19_v1_chr3_+_44379944 AK056593 NM_001029839 NM_173826 BC062587	306715	+	NM_016006|ABHD5|51099|abhydrolase domain containing 5##BC021958|ABHD5|51099|abhydrolase domain containing 5##AK313811|ABHD5|51099|abhydrolase domain containing 5##AF151816|ABHD5|51099|abhydrolase domain containing 5##DQ891175|ABHD5|51099|abhydrolase domain containing 5##DQ894357|ABHD5|51099|abhydrolase domain containing 5##AK131223|ANO10|55129|anoctamin 10##AK295969|ANO10|55129|anoctamin 10##AK297949|ANO10|55129|anoctamin 10##AK096302|ANO10|55129|anoctamin 10##NM_001204831|ANO10|55129|anoctamin 10##NM_001204832|ANO10|55129|anoctamin 10##NM_001204833|ANO10|55129|anoctamin 10##NM_001204834|ANO10|55129|anoctamin 10##NM_018075|ANO10|55129|anoctamin 10##AL832508|ANO10|55129|anoctamin 10##AK292368|ANO10|55129|anoctamin 10##BC038855|ANO10|55129|anoctamin 10##AK093476|C3orf77|375337|chromosome 3 open reading frame 77##NM_001145030|C3orf77|375337|chromosome 3 open reading frame 77##AK292756|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029840|C3orf23|285343|chromosome 3 open reading frame 23##BC009400|C3orf23|285343|chromosome 3 open reading frame 23##AK056593|C3orf23|285343|chromosome 3 open reading frame 23##NM_001029839|C3orf23|285343|chromosome 3 open reading frame 23##NM_173826|C3orf23|285343|chromosome 3 open reading frame 23##BC062587|C3orf23|285343|chromosome 3 open reading frame 23	0.0	
chr3	71071850	71071994	reg1044024.p2	3.451	+	TSC_hg19_v1_chr3_+_70048883 BC015590	-1023034	+	NM_000248 NM_001184968 NM_198158 NM_198178 Z29678 BC012503 BC065243 BC026961 GU355676	-1086111	+	NM_198177 AB006989 AK297858	-1156521	+	TSC_hg19_v1_chr3_-_71114076 AK074569 NM_001244813	42274	-	TSC_hg19_v1_chr3_-_71179732 AK027264	107801	-	AK297649 TSC_hg19_v1_chr3_-_71179738 BX647682	107818	-	NM_000248|MITF|4286|microphthalmia-associated transcription factor##NM_001184968|MITF|4286|microphthalmia-associated transcription factor##NM_198158|MITF|4286|microphthalmia-associated transcription factor##NM_198178|MITF|4286|microphthalmia-associated transcription factor##Z29678|MITF|4286|microphthalmia-associated transcription factor##BC012503|MITF|4286|microphthalmia-associated transcription factor##BC065243|MITF|4286|microphthalmia-associated transcription factor##BC026961|MITF|4286|microphthalmia-associated transcription factor##GU355676|MITF|4286|microphthalmia-associated transcription factor##NM_198177|MITF|4286|microphthalmia-associated transcription factor##AB006989|MITF|4286|microphthalmia-associated transcription factor##AK297858|MITF|4286|microphthalmia-associated transcription factor##AK074569|FOXP1|27086|forkhead box P1##NM_001244813|FOXP1|27086|forkhead box P1##AK027264|FOXP1|27086|forkhead box P1##AK297649|FOXP1|27086|forkhead box P1##BX647682|FOXP1|27086|forkhead box P1	0.030742	
chr4	185248839	185248905	reg1025482.p1	3.451	+	BC035035 AY358676 AK057370 NM_153343	-109807	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-420961	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-421052	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	146809	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	321729	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	321961	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr5	169130228	169130380	reg1038333.p2	3.451	+	TSC_hg19_v1_chr5_+_169064292 D86964 BC104900 BC113457 BC143358 AB463008	-66004	+	TSC_hg19_v1_chr5_+_169064250 NM_004946	-66060	+	NM_017785 TSC_hg19_v1_chr5_+_169010791 AK304623 AF269167 AK310442 AK308835 BC012568 AY517557	-119583	+	AK055998 NM_001129891	277439	-	AK292176 BC029778 NM_012188 NM_144769 AB464531 L13203 AY707089	402667	+	BC030767 NM_001102609 BC092511	529692	+	D86964|DOCK2|1794|dedicator of cytokinesis 2##BC104900|DOCK2|1794|dedicator of cytokinesis 2##BC113457|DOCK2|1794|dedicator of cytokinesis 2##BC143358|DOCK2|1794|dedicator of cytokinesis 2##NM_004946|DOCK2|1794|dedicator of cytokinesis 2##NM_017785|CCDC99|54908|coiled-coil domain containing 99##AK304623|CCDC99|54908|coiled-coil domain containing 99##AF269167|CCDC99|54908|coiled-coil domain containing 99##AK310442|CCDC99|54908|coiled-coil domain containing 99##AK308835|CCDC99|54908|coiled-coil domain containing 99##BC012568|CCDC99|54908|coiled-coil domain containing 99##AY517557|CCDC99|54908|coiled-coil domain containing 99##AK055998|FAM196B|100131897|family with sequence similarity 196, member B##NM_001129891|FAM196B|100131897|family with sequence similarity 196, member B##AK292176|FOXI1|2299|forkhead box I1##BC029778|FOXI1|2299|forkhead box I1##NM_012188|FOXI1|2299|forkhead box I1##NM_144769|FOXI1|2299|forkhead box I1##L13203|FOXI1|2299|forkhead box I1##AY707089|FOXI1|2299|forkhead box I1##BC030767|C5orf58|133874|chromosome 5 open reading frame 58##NM_001102609|C5orf58|133874|chromosome 5 open reading frame 58##BC092511|C5orf58|133874|chromosome 5 open reading frame 58	0.0	
chr8	66754290	66754369	reg1042682.p1	3.451	+	TSC_hg19_v1_chr8_-_66754300 AK292680	-37	-	NM_001242318	-361	-	HQ258418 AK290801 BC058025 BC126360 NM_002603 U67932	-53078	-	NM_033105 BC016742 AF368276 AL133660	179490	+	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	285011	+	BC002599 BC011031 AK075431 NM_000756	336438	-	AK292680|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##HQ258418|PDE7A|5150|phosphodiesterase 7A##AK290801|PDE7A|5150|phosphodiesterase 7A##BC058025|PDE7A|5150|phosphodiesterase 7A##BC126360|PDE7A|5150|phosphodiesterase 7A##NM_002603|PDE7A|5150|phosphodiesterase 7A##U67932|PDE7A|5150|phosphodiesterase 7A##NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone	0.0	
chr9	131936233	131936326	reg1002229.p1	3.451	+	AK310328 TSC_hg19_v1_chr9_+_131902359	-33969	+	TSC_hg19_v1_chr9_+_131901694 AK293296	-34560	+	TSC_hg19_v1_chr9_+_131873871 AK297202 AB464103 BT020119 CU678032 DQ892154 DQ894879 DQ895349 AK307424 NM_001193397	-62420	+	TSC_hg19_v1_chr9_-_131940534 BC064028	4228	-	TSC_hg19_v1_chr9_-_131940541 NM_203434	4261	-	AK092588 AX747616 NM_001012715 BC132699 BC132701	147016	+	AK310328|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK297202|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##BT020119|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ892154|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ894879|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##DQ895349|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK307424|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##NM_001193397|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##BC064028|IER5L|389792|immediate early response 5-like##NM_203434|IER5L|389792|immediate early response 5-like##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106	0.0	
chr10	121302190	121302277	reg1004771.p1	3.450	+	AB587433 BC009361 TSC_hg19_v1_chr10_-_121302217 AK290773 NM_001005339	-43	-	NM_002925	-6189	-	TSC_hg19_v1_chr10_+_120967098 BC018116 BC064506 BC064506 NM_005308 L15388 AK309761 AK309761 AK313012 AB590773	-334972	+	AB527493 AY633610 AK295243 M96954 TSC_hg19_v1_chr10_-_121356143 AK290984 AK291239	53875	-	TSC_hg19_v1_chr10_-_121356475 AL833106 AK290695	54267	-	TSC_hg19_v1_chr10_-_121356537 BC030025 NM_001033925 NM_003252	54319	-	BC009361|RGS10|6001|regulator of G-protein signaling 10##AK290773|RGS10|6001|regulator of G-protein signaling 10##NM_001005339|RGS10|6001|regulator of G-protein signaling 10##NM_002925|RGS10|6001|regulator of G-protein signaling 10##BC018116|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##BC064506|GRK5|2869|G protein-coupled receptor kinase 5##NM_005308|GRK5|2869|G protein-coupled receptor kinase 5##L15388|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK309761|GRK5|2869|G protein-coupled receptor kinase 5##AK313012|GRK5|2869|G protein-coupled receptor kinase 5##AY633610|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK295243|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##M96954|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290984|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK291239|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AL833106|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##AK290695|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##BC030025|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##NM_001033925|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1##NM_003252|TIAL1|7073|TIA1 cytotoxic granule-associated RNA binding protein-like 1	0.0	
chr16	78133953	78134069	reg1038581.p2	3.450	+	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-556	+	NM_001244755	-71026	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	-77561	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	1500604	-	AF125108 NM_130897 BC054892 BC035232	2440877	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	2704036	-	NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2	1.607556	CTCF.p2:0:0.962	CTCF.p2:-67:0.620
chr16	89544628	89544741	reg1036167.p2	3.450	+	AK293862 NM_001242885	-157144	+	BC041585 TSC_hg19_v1_chr16_-_89351073	-193728	-	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	-194610	-	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	12247	-	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	30130	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	82381	+	AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC041585|ANKRD11|29123|ankyrin repeat domain 11##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13	0.0	
chr17	3911530	3911622	reg1042153.p1	3.450	+	AB462957 DQ893317 EU176809 Z69881 TSC_hg19_v1_chr17_-_3867744 AF068220 BC035729 AK292716 NM_005173 NM_174953 NM_174954 NM_174955 NM_174956 NM_174957 NM_174958	-43875	-	NM_002558	-91617	-	X83688 U45448 BC044657 BC027949 TSC_hg19_v1_chr17_-_3819762 AK310981 AK313264 AF020498	-91828	-	AB384472 TSC_hg19_v1_chr17_-_4046240	134639	-	TSC_hg19_v1_chr17_-_4046246 AB007859 BC151836 NM_015113	134676	-	TSC_hg19_v1_chr17_-_4046308 AK127482	134734	-	DQ893317|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##EU176809|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##Z69881|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AF068220|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##BC035729|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##AK292716|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_005173|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174953|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174954|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174955|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174956|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174957|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_174958|ATP2A3|489|ATPase, Ca++ transporting, ubiquitous##NM_002558|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##X83688|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##U45448|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC044657|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##BC027949|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AK313264|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AF020498|P2RX1|5023|purinergic receptor P2X, ligand-gated ion channel, 1##AB007859|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##BC151836|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##NM_015113|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1##AK127482|ZZEF1|23140|zinc finger, ZZ-type with EF-hand domain 1	0.846883	CTCF.p2:-46:0.847
chr19	1354465	1354591	reg1038267.p2	3.450	+	TSC_hg19_v1_chr19_+_1286081 AJ007292 NM_001405 AB463609	-68563	+	TSC_hg19_v1_chr19_+_1275540 NM_017914 BC000890 BC012080	-78961	+	CU674448 AB528491 EU176219 EU176522 AB451225 AB451348 BT007210 TSC_hg19_v1_chr19_+_1270968	-83579	+	TSC_hg19_v1_chr19_+_1354979 NM_032853 AK310721 U20897	473	+	TSC_hg19_v1_chr19_+_1383882 AK092169 AX747389 NM_024407 AK128713	29358	+	AK293917 AK297611 TSC_hg19_v1_chr19_+_1383902 AF115969 AK091623 AK127759 AX747100	29372	+	AJ007292|EFNA2|1943|ephrin-A2##NM_001405|EFNA2|1943|ephrin-A2##NM_017914|C19orf24|55009|chromosome 19 open reading frame 24##BC000890|C19orf24|55009|chromosome 19 open reading frame 24##BC012080|C19orf24|55009|chromosome 19 open reading frame 24##EU176219|CIRBP|1153|cold inducible RNA binding protein##EU176522|CIRBP|1153|cold inducible RNA binding protein##AB451225|CIRBP|1153|cold inducible RNA binding protein##AB451348|CIRBP|1153|cold inducible RNA binding protein##BT007210|CIRBP|1153|cold inducible RNA binding protein##NM_032853|MUM1|84939|melanoma associated antigen (mutated) 1##AK310721|MUM1|84939|melanoma associated antigen (mutated) 1##U20897|MUM1|84939|melanoma associated antigen (mutated) 1##AK092169|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##NM_024407|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK128713|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK293917|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AF115969|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK091623|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)##AK127759|NDUFS7|374291|NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)	0.0	
chr19	54808514	54808632	reg1035457.p1	3.450	+	AF014923 AF014924 AF041262 CU688428 DQ891075 DQ894258 AB590305 NM_001172654 U91926 BC028208 AF025527 NM_006865 TSC_hg19_v1_chr19_-_54804279	-4336	-	BC036827 AF283986 AF025528 BC025766 TSC_hg19_v1_chr19_-_54784966 AK297071 AK226015 AK297041 NM_001080978 NM_005874	-23596	-	DQ894102 AK090399 AF025534 AK057072 BC025704 AK223296 AK301112 AK096122 AK301338 AK092867 AK290845 NM_001081442 NM_001081443 NM_006840	-47462	-	AF499917 EU915611 EU915612 AF499916 AF499919 AF499918 AF324830 NM_021250 NM_181879 NM_181985 NM_181986	15802	-	BC109198 BC109199 NM_012276	41829	-	CR542051 CU693316 DQ892072 DQ895266 AF251509 AF251510 BC027899 AF109683 AF013249 AK309895 TSC_hg19_v1_chr19_-_54876492	67879	-	AF014923|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF014924|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF041262|LILRA6|79168|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6##DQ891075|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##DQ894258|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##NM_001172654|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##U91926|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##BC028208|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##AF025527|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##NM_006865|LILRA3|11026|leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3##BC036827|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AF283986|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AF025528|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##BC025766|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK297071|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK226015|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##AK297041|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##NM_001080978|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##NM_005874|LILRB2|10288|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2##DQ894102|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK090399|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AF025534|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK057072|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##BC025704|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK223296|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK301112|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK096122|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK301338|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK092867|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AK290845|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##NM_001081442|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##NM_001081443|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##NM_006840|LILRB5|10990|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 5##AF499917|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##EU915611|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##EU915612|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499916|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499919|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF499918|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##AF324830|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_021250|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181879|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181985|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##NM_181986|LILRA5|353514|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5##BC109198|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##BC109199|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##NM_012276|LILRA4|23547|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4##CR542051|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##DQ892072|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##DQ895266|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF251509|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF251510|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##BC027899|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF109683|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AF013249|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1##AK309895|LAIR1|3903|leukocyte-associated immunoglobulin-like receptor 1	0.0	
chr19	6393270	6393396	reg1041087.p2	3.450	+	BT007097 CR456798 CU680466 AB385238 DQ890597 DQ893766 X64002 BC000120 BC013007 TSC_hg19_v1_chr19_-_6393176 AK315240 X64037 AK293124 NM_002096	-186	-	AB528873 AF040962 NM_004158 BC143894	-17457	-	AK311956 TSC_hg19_v1_chr19_+_6372805 AK223336	-20521	+	U69126 TSC_hg19_v1_chr19_-_6424561	31220	-	TSC_hg19_v1_chr19_-_6424790 BC085004	31455	-	U94832 TSC_hg19_v1_chr19_-_6424804	31471	-	BT007097|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##CR456798|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##DQ890597|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##DQ893766|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##X64002|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##BC000120|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##BC013007|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##AK315240|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##X64037|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##AK293124|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##NM_002096|GTF2F1|2962|general transcription factor IIF, polypeptide 1, 74kDa##AF040962|PSPN|5623|persephin##NM_004158|PSPN|5623|persephin##AK311956|ALKBH7|84266|alkB, alkylation repair homolog 7 (E. coli)##AK223336|ALKBH7|84266|alkB, alkylation repair homolog 7 (E. coli)##U69126|KHSRP|8570|KH-type splicing regulatory protein##BC085004|KHSRP|8570|KH-type splicing regulatory protein##U94832|KHSRP|8570|KH-type splicing regulatory protein	0.0	
chr3	134515776	134515889	reg1039454.p2	3.450	+	TSC_hg19_v1_chr3_+_134514301 BC111744	-1531	+	TSC_hg19_v1_chr3_+_134514101 NM_004441 AK291208 AK309741 L40636	-1681	+	BC136349 AK293840 AK294500 AK090526 AK126993 AX746495 NM_178554 TSC_hg19_v1_chr3_-_134369865	-145987	-	TSC_hg19_v1_chr3_+_135684569 NM_001190447 NM_002718 AK293012 BC015034 BC065531 AK298059 AK314243	1168699	+	BC029409 TSC_hg19_v1_chr3_+_135684606 L07590	1168788	+	NM_181897 AK316258 L12146	1225786	+	BC111744|EPHB1|2047|EPH receptor B1##NM_004441|EPHB1|2047|EPH receptor B1##AK291208|EPHB1|2047|EPH receptor B1##AK309741|EPHB1|2047|EPH receptor B1##L40636|EPHB1|2047|EPH receptor B1##BC136349|KY|339855|kyphoscoliosis peptidase##AK293840|KY|339855|kyphoscoliosis peptidase##AK294500|KY|339855|kyphoscoliosis peptidase##AK090526|KY|339855|kyphoscoliosis peptidase##AK126993|KY|339855|kyphoscoliosis peptidase##NM_178554|KY|339855|kyphoscoliosis peptidase##NM_001190447|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_002718|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK293012|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC015034|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC065531|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK298059|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK314243|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##BC029409|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L07590|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##NM_181897|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##AK316258|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha##L12146|PPP2R3A|5523|protein phosphatase 2, regulatory subunit B'', alpha	0.0	
chr5	132657647	132657713	reg1040270.p2	3.450	+	TSC_hg19_v1_chr5_+_132432890 AK315862	-224789	+	TSC_hg19_v1_chr5_+_132428397 AK315887 AK311316	-229277	+	TSC_hg19_v1_chr5_+_132406081 AK295847 AK311471	-251577	+	TSC_hg19_v1_chr5_-_132948202 AK055684	290519	-	NM_015082 TSC_hg19_v1_chr5_-_132948227 BC024300	290558	-	DQ892022 DQ895214 TSC_hg19_v1_chr5_-_133304299 BC020875 AK298515 AK315362 AY157581 AK074963 NM_020199 AF226055	646695	-	AK315862|HSPA4|3308|heat shock 70kDa protein 4##AK315887|HSPA4|3308|heat shock 70kDa protein 4##AK311316|HSPA4|3308|heat shock 70kDa protein 4##AK295847|HSPA4|3308|heat shock 70kDa protein 4##AK311471|HSPA4|3308|heat shock 70kDa protein 4##AK055684|FSTL4|23105|follistatin-like 4##NM_015082|FSTL4|23105|follistatin-like 4##BC024300|FSTL4|23105|follistatin-like 4##DQ892022|C5orf15|56951|chromosome 5 open reading frame 15##DQ895214|C5orf15|56951|chromosome 5 open reading frame 15##BC020875|C5orf15|56951|chromosome 5 open reading frame 15##AK298515|C5orf15|56951|chromosome 5 open reading frame 15##AK315362|C5orf15|56951|chromosome 5 open reading frame 15##AY157581|C5orf15|56951|chromosome 5 open reading frame 15##AK074963|C5orf15|56951|chromosome 5 open reading frame 15##NM_020199|C5orf15|56951|chromosome 5 open reading frame 15##AF226055|C5orf15|56951|chromosome 5 open reading frame 15	0.0	
chr5	464486	464585	reg1026096.p2	3.450	+	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	-21185	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	-21305	-	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-160245	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	8577	-	BC101669 BC101671 BC143328 U28043 BC011555 NM_004174 TSC_hg19_v1_chr5_-_524565	59970	-	NM_018140 TSC_hg19_v1_chr5_+_612451	147893	+	AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845##BC101669|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC101671|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC143328|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##U28043|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##BC011555|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##NM_004174|SLC9A3|6550|solute carrier family 9 (sodium/hydrogen exchanger), member 3##NM_018140|CEP72|55722|centrosomal protein 72kDa	0.0	
chr8	127616204	127616329	reg1033230.p1	3.450	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-45542	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-45711	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-652853	-	DQ486513 NM_001159542	811590	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	1132059	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	1132224	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.831143	CTCF.p2:12:0.831
chr10	104180529	104180596	reg1036816.p1	3.449	+	NM_024326 BC036120	-983	+	BC039259 TSC_hg19_v1_chr10_-_104179472 AF452641	-1091	-	AB095931 NM_002779 TSC_hg19_v1_chr10_-_104178917	-1654	-	TSC_hg19_v1_chr10_-_104192345 AK094695 BC000262	11778	-	TSC_hg19_v1_chr10_-_104192372 NM_024040	11825	-	BC126459 AK024342 NM_024886	30709	-	NM_024326|FBXL15|79176|F-box and leucine-rich repeat protein 15##BC036120|FBXL15|79176|F-box and leucine-rich repeat protein 15##BC039259|PSD|5662|pleckstrin and Sec7 domain containing##AF452641|PSD|5662|pleckstrin and Sec7 domain containing##AB095931|PSD|5662|pleckstrin and Sec7 domain containing##NM_002779|PSD|5662|pleckstrin and Sec7 domain containing##BC000262|CUEDC2|79004|CUE domain containing 2##NM_024040|CUEDC2|79004|CUE domain containing 2##BC126459|C10orf95|79946|chromosome 10 open reading frame 95##AK024342|C10orf95|79946|chromosome 10 open reading frame 95##NM_024886|C10orf95|79946|chromosome 10 open reading frame 95	0.0	
chr11	66867482	66867662	reg1031679.p1	3.449	+	TSC_hg19_v1_chr11_+_66824317 BC001338 AF498973 CU674656 DQ891124 DQ894303	-43232	+	TSC_hg19_v1_chr11_+_66824285 NM_014578	-43286	+	NM_177963 AK289672 AK289727 BC037406	-76720	+	TSC_hg19_v1_chr11_+_66886737 BC047486 NM_012308	19167	+	AK096194 TSC_hg19_v1_chr11_+_67007484	139912	+	TSC_hg19_v1_chr11_+_67007558 AB490246 AK299725	140011	+	BC001338|RHOD|29984|ras homolog gene family, member D##AF498973|RHOD|29984|ras homolog gene family, member D##DQ891124|RHOD|29984|ras homolog gene family, member D##DQ894303|RHOD|29984|ras homolog gene family, member D##NM_014578|RHOD|29984|ras homolog gene family, member D##NM_177963|SYT12|91683|synaptotagmin XII##AK289672|SYT12|91683|synaptotagmin XII##AK289727|SYT12|91683|synaptotagmin XII##BC037406|SYT12|91683|synaptotagmin XII##BC047486|KDM2A|22992|lysine (K)-specific demethylase 2A##NM_012308|KDM2A|22992|lysine (K)-specific demethylase 2A##AK096194|LOC100131150|100131150|uncharacterized LOC100131150##AB490246|KDM2A|22992|lysine (K)-specific demethylase 2A##AK299725|KDM2A|22992|lysine (K)-specific demethylase 2A	0.0	
chr12	133131582	133131661	reg1042665.p1	3.449	+	NM_001142641	-64465	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-225764	-	AF458594 NM_021808	-441049	-	NM_001195520	55415	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	63783	+	BC021559 TSC_hg19_v1_chr12_-_133215909	84221	-	NM_001142641|FBRSL1|57666|fibrosin-like 1##BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC021559|POLE|5426|polymerase (DNA directed), epsilon	0.991474	CTCF.p2:11:0.991
chr14	77617935	77618061	reg1018875.p2	3.449	+	AK294840 TSC_hg19_v1_chr14_-_77608135 AK095612 NM_174976	-9863	-	BC117676 TSC_hg19_v1_chr14_-_77608072	-9983	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	-53353	+	TSC_hg19_v1_chr14_+_77648082 NM_020431	30094	+	TSC_hg19_v1_chr14_+_77648137 AK125159 BC136613 BC136614	30175	+	TSC_hg19_v1_chr14_-_77737552 AF422797 NM_021257	119603	-	AK294840|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK095612|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_174976|ZDHHC22|283576|zinc finger, DHHC-type containing 22##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##NM_020431|TMEM63C|57156|transmembrane protein 63C##AK125159|TMEM63C|57156|transmembrane protein 63C##BC136613|TMEM63C|57156|transmembrane protein 63C##BC136614|TMEM63C|57156|transmembrane protein 63C##AF422797|NGB|58157|neuroglobin##NM_021257|NGB|58157|neuroglobin	0.0	
chr14	88459685	88459762	reg1037406.p2	3.449	+	TSC_hg19_v1_chr14_-_88459523 D25283 D25284 AK296530 L23116 AK294040 NM_000153 NM_001201401	-164	-	DQ891232 DQ894416 TSC_hg19_v1_chr14_-_88459468 BC036518	-260	-	TSC_hg19_v1_chr14_+_85999692 AK297248	-2460138	+	NM_001201402	285	-	NM_003608 TSC_hg19_v1_chr14_+_88471478 AK313797 BC035633 BC071715	11777	+	BC029479 TSC_hg19_v1_chr14_+_88490954	31200	+	D25283|GALC|2581|galactosylceramidase##D25284|GALC|2581|galactosylceramidase##AK296530|GALC|2581|galactosylceramidase##L23116|GALC|2581|galactosylceramidase##AK294040|GALC|2581|galactosylceramidase##NM_000153|GALC|2581|galactosylceramidase##NM_001201401|GALC|2581|galactosylceramidase##DQ891232|GALC|2581|galactosylceramidase##DQ894416|GALC|2581|galactosylceramidase##BC036518|GALC|2581|galactosylceramidase##NM_001201402|GALC|2581|galactosylceramidase##NM_003608|GPR65|8477|G protein-coupled receptor 65##AK313797|GPR65|8477|G protein-coupled receptor 65##BC035633|GPR65|8477|G protein-coupled receptor 65##BC071715|GPR65|8477|G protein-coupled receptor 65##BC029479|LOC283587|283587|uncharacterized LOC283587	0.41784	CTCF.p2:28:0.418
chr20	42745117	42745297	reg1001148.p1	3.449	+	NM_001098798	-170672	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	-200414	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	-201720	+	AL132999 TSC_hg19_v1_chr20_-_42815818 AK304863	70586	-	BC029957 NM_020433 NM_175913	71010	-	TSC_hg19_v1_chr20_-_42839412 BC064973 AK315155 AF217514	94149	-	NM_001098798|TOX2|84969|TOX high mobility group box family member 2##NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##AL132999|JPH2|57158|junctophilin 2##AK304863|JPH2|57158|junctophilin 2##BC029957|JPH2|57158|junctophilin 2##NM_020433|JPH2|57158|junctophilin 2##NM_175913|JPH2|57158|junctophilin 2##BC064973|C20orf111|51526|chromosome 20 open reading frame 111##AK315155|C20orf111|51526|chromosome 20 open reading frame 111##AF217514|C20orf111|51526|chromosome 20 open reading frame 111	0.0	
chr21	45249520	45249611	reg1037496.p1	3.449	+	TSC_hg19_v1_chr21_+_45209457 AK223185 AK303000 AK223215 AK313116 BC000380 U79775 CU674182 DQ891391 DQ894567 BC014787	-40080	+	TSC_hg19_v1_chr21_+_45209429 NM_003683	-40150	+	TSC_hg19_v1_chr21_-_45196227 BC010532 L03558 NM_000100	-53336	-	TSC_hg19_v1_chr21_+_45285029 AY358704	35495	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	35558	+	AK300562 NM_001037553	95713	+	AK223185|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK303000|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK223215|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK313116|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC000380|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##U79775|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ891391|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ894567|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC014787|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##NM_003683|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC010532|CSTB|1476|cystatin B (stefin B)##L03558|CSTB|1476|cystatin B (stefin B)##NM_000100|CSTB|1476|cystatin B (stefin B)##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3	0.0	
chr3	137055109	137055290	reg1031727.p2	3.449	+	AY358305 NM_144717 AK316084 AK296832 BC063696 BC033292 CU687808	-378369	+	NM_001190796 TSC_hg19_v1_chr3_+_136649346 AK301460	-405862	+	TSC_hg19_v1_chr3_+_136581074 X17576 AK312692	-474107	+	NM_004189 AK314127 TSC_hg19_v1_chr3_+_137483154	427948	+	AK098474 NM_001002026 AF349452	662480	+	AK298103 AY358479 TSC_hg19_v1_chr3_+_137728997 BC142708 BC146668 NM_016369 BC063845 AF221069	673804	+	AY358305|IL20RB|53833|interleukin 20 receptor beta##NM_144717|IL20RB|53833|interleukin 20 receptor beta##AK316084|IL20RB|53833|interleukin 20 receptor beta##AK296832|IL20RB|53833|interleukin 20 receptor beta##BC063696|IL20RB|53833|interleukin 20 receptor beta##BC033292|IL20RB|53833|interleukin 20 receptor beta##NM_001190796|NCK1|4690|NCK adaptor protein 1##AK301460|NCK1|4690|NCK adaptor protein 1##X17576|NCK1|4690|NCK adaptor protein 1##AK312692|NCK1|4690|NCK adaptor protein 1##NM_004189|SOX14|8403|SRY (sex determining region Y)-box 14##AK314127|SOX14|8403|SRY (sex determining region Y)-box 14##AK098474|CLDN18|51208|claudin 18##NM_001002026|CLDN18|51208|claudin 18##AF349452|CLDN18|51208|claudin 18##AK298103|CLDN18|51208|claudin 18##AY358479|CLDN18|51208|claudin 18##BC142708|CLDN18|51208|claudin 18##BC146668|CLDN18|51208|claudin 18##NM_016369|CLDN18|51208|claudin 18##BC063845|CLDN18|51208|claudin 18##AF221069|CLDN18|51208|claudin 18	0.172886	
chr3	189538371	189538511	reg1042640.p1	3.449	+	AK304127 NM_001114980 NM_001114981 NM_001114982 GQ202689 GQ202690 AF091627 AB010153 AB042841 AF075429 AF075431 AF075433	-30923	+	BC039815 NM_001114978 NM_001114979 NM_003722 AB016072 AB016073 AF116771 Y16961 CU691766 EU446669	-189182	+	AK125682 NM_198485 BC101550 BC101552	-648630	+	TSC_hg19_v1_chr3_-_189838687 AK125134 AJ430351 AK056447	300254	-	NM_018192	300466	-	NM_001134418	301784	-	AK304127|TP63|8626|tumor protein p63##NM_001114980|TP63|8626|tumor protein p63##NM_001114981|TP63|8626|tumor protein p63##NM_001114982|TP63|8626|tumor protein p63##GQ202689|TP63|8626|tumor protein p63##GQ202690|TP63|8626|tumor protein p63##AF091627|TP63|8626|tumor protein p63##AB010153|TP63|8626|tumor protein p63##AB042841|TP63|8626|tumor protein p63##AF075429|TP63|8626|tumor protein p63##AF075431|TP63|8626|tumor protein p63##AF075433|TP63|8626|tumor protein p63##BC039815|TP63|8626|tumor protein p63##NM_001114978|TP63|8626|tumor protein p63##NM_001114979|TP63|8626|tumor protein p63##NM_003722|TP63|8626|tumor protein p63##AB016072|TP63|8626|tumor protein p63##AB016073|TP63|8626|tumor protein p63##AF116771|TP63|8626|tumor protein p63##Y16961|TP63|8626|tumor protein p63##EU446669|TP63|8626|tumor protein p63##AK125682|TPRG1|285386|tumor protein p63 regulated 1##NM_198485|TPRG1|285386|tumor protein p63 regulated 1##BC101550|TPRG1|285386|tumor protein p63 regulated 1##BC101552|TPRG1|285386|tumor protein p63 regulated 1##AK125134|LEPREL1|55214|leprecan-like 1##AJ430351|LEPREL1|55214|leprecan-like 1##AK056447|LEPREL1|55214|leprecan-like 1##NM_018192|LEPREL1|55214|leprecan-like 1##NM_001134418|LEPREL1|55214|leprecan-like 1	0.0	
chr4	26131898	26132030	reg1034461.p1	3.449	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-216100	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-267410	-	NM_001177999 AK314514	-473874	+	L07875 BC020780 NM_005349 NM_203283	189355	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	190345	+	TSC_hg19_v1_chr4_+_26322635 AK302230	190672	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.0	
chr5	173116850	173116945	reg1035394.p1	3.449	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-73224	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-73269	-	BC003114 TSC_hg19_v1_chr5_-_173043602	-73300	-	TSC_hg19_v1_chr5_+_173315343 NM_030627	198481	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	299293	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	355814	+	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein	0.0	
chr6	123160992	123161173	reg1000552.p2	3.449	+	TSC_hg19_v1_chr6_+_123110402 AK000184 BC018999 BC066591 AK301365 DQ892207 DQ895402 CU676352	-50665	+	NM_006714	-51112	+	AK311867 TSC_hg19_v1_chr6_+_123100861 AK289836 AK307272 AJ002962 AB208815 U51338 D50373 D88648 AL512688 U81235 CR457057 DQ891437 DQ894613 EU176601	-60183	+	TSC_hg19_v1_chr6_+_123317379 AK295158	156301	+	BC101377 BC101376 NM_001010852	156498	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	797007	-	AK000184|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC018999|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##BC066591|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK301365|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ892207|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##DQ895402|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##NM_006714|SMPDL3A|10924|sphingomyelin phosphodiesterase, acid-like 3A##AK311867|FABP7|2173|fatty acid binding protein 7, brain##AK289836|FABP7|2173|fatty acid binding protein 7, brain##AJ002962|FABP7|2173|fatty acid binding protein 7, brain##U51338|FABP7|2173|fatty acid binding protein 7, brain##D50373|FABP7|2173|fatty acid binding protein 7, brain##D88648|FABP7|2173|fatty acid binding protein 7, brain##AL512688|FABP7|2173|fatty acid binding protein 7, brain##U81235|FABP7|2173|fatty acid binding protein 7, brain##CR457057|FABP7|2173|fatty acid binding protein 7, brain##DQ891437|FABP7|2173|fatty acid binding protein 7, brain##DQ894613|FABP7|2173|fatty acid binding protein 7, brain##EU176601|FABP7|2173|fatty acid binding protein 7, brain##AK295158|CLVS2|134829|clavesin 2##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin	0.0	
chrX	118825227	118825407	reg1025760.p2	3.449	+	BC047878 BC068514 BC040379 AY208891 NM_001173487 NM_017544	-85489	-	EF165090 EF165091 EF165093 AJ011812 EF158333 EF216688 EF216689 NM_001173488	-98335	-	BC042021 NM_181777	-111020	+	D50918 AB384441 CU679289 CU680116 CU690318 TSC_hg19_v1_chrX_-_118827108 BC069231	1768	-	BC009291 AK303116 BC011922 TSC_hg19_v1_chrX_-_118827123 AK026589	1815	-	TSC_hg19_v1_chrX_-_118827155 BC036240 AK299273 AF397023	1862	-	BC047878|NKRF|55922|NFKB repressing factor##BC068514|NKRF|55922|NFKB repressing factor##BC040379|NKRF|55922|NFKB repressing factor##AY208891|NKRF|55922|NFKB repressing factor##NM_001173487|NKRF|55922|NFKB repressing factor##NM_017544|NKRF|55922|NFKB repressing factor##EF165090|NKRF|55922|NFKB repressing factor##EF165091|NKRF|55922|NFKB repressing factor##EF165093|NKRF|55922|NFKB repressing factor##AJ011812|NKRF|55922|NFKB repressing factor##EF158333|NKRF|55922|NFKB repressing factor##EF216688|NKRF|55922|NFKB repressing factor##EF216689|NKRF|55922|NFKB repressing factor##NM_001173488|NKRF|55922|NFKB repressing factor##BC042021|UBE2A|7319|ubiquitin-conjugating enzyme E2A##NM_181777|UBE2A|7319|ubiquitin-conjugating enzyme E2A##D50918|SEPT6|23157|septin 6##BC069231|SEPT6|23157|septin 6##BC009291|SEPT6|23157|septin 6##AK303116|SEPT6|23157|septin 6##BC011922|SEPT6|23157|septin 6##AK026589|SEPT6|23157|septin 6##BC036240|SEPT6|23157|septin 6##AK299273|SEPT6|23157|septin 6##AF397023|SEPT6|23157|septin 6	0.0	
chrX	38577268	38577383	reg1039527.p1	3.449	+	TSC_hg19_v1_chrX_+_38420794 NM_004615 AB062057 L10373 BC018036 AK293534 AK293178 AK293552 AK312343 D10653 CU676142 DQ892093 DQ895571 D29808 AB102665	-156573	+	BC107153 BC107154 NM_000531 BC114496 AK292757 K02100 BC074745	-365501	+	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	-390530	-	TSC_hg19_v1_chrX_+_38660678 NM_001098790 NM_001098791	83343	+	TSC_hg19_v1_chrX_+_38660711 BC019332	83381	+	BC008908 NM_021242	85747	+	NM_004615|TSPAN7|7102|tetraspanin 7##AB062057|TSPAN7|7102|tetraspanin 7##L10373|TSPAN7|7102|tetraspanin 7##BC018036|TSPAN7|7102|tetraspanin 7##AK293534|TSPAN7|7102|tetraspanin 7##AK293178|TSPAN7|7102|tetraspanin 7##AK293552|TSPAN7|7102|tetraspanin 7##AK312343|TSPAN7|7102|tetraspanin 7##D10653|TSPAN7|7102|tetraspanin 7##DQ892093|TSPAN7|7102|tetraspanin 7##DQ895571|TSPAN7|7102|tetraspanin 7##D29808|TSPAN7|7102|tetraspanin 7##AB102665|TSPAN7|7102|tetraspanin 7##BC107153|OTC|5009|ornithine carbamoyltransferase##BC107154|OTC|5009|ornithine carbamoyltransferase##NM_000531|OTC|5009|ornithine carbamoyltransferase##BC114496|OTC|5009|ornithine carbamoyltransferase##AK292757|OTC|5009|ornithine carbamoyltransferase##K02100|OTC|5009|ornithine carbamoyltransferase##BC074745|OTC|5009|ornithine carbamoyltransferase##DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001098790|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_001098791|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC019332|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))	0.900428	CTCF.p2:-7:0.900
chr10	73975753	73975888	reg1041521.p2	3.448	+	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-32	+	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	-56	-	D87465 TSC_hg19_v1_chr10_-_73848773 NM_001134434 NM_014767	-127043	-	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	291	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	58004	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	138858	-	NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##D87465|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##NM_001134434|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##NM_014767|SPOCK2|9806|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2##AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	0.0	
chr1	23933970	23934065	reg1038409.p1	3.448	+	NM_002167 X69111	-47733	-	BT006791 AB528505 DQ892504 DQ895539 DQ895717 TSC_hg19_v1_chr1_-_23885993 BC003107 D28449 AK225965 AK290003	-48033	-	L22846 NM_004091	-76306	-	NM_000975 NM_001199802 TSC_hg19_v1_chr1_+_24018290 D28357 AK311816	84263	+	TSC_hg19_v1_chr1_+_24018295 BC018970	84282	+	NM_003198 AK310229 TSC_hg19_v1_chr1_+_24069922	135887	+	NM_002167|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##X69111|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BT006791|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ892504|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895539|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##DQ895717|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##BC003107|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##D28449|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##AK290003|ID3|3399|inhibitor of DNA binding 3, dominant negative helix-loop-helix protein##L22846|E2F2|1870|E2F transcription factor 2##NM_004091|E2F2|1870|E2F transcription factor 2##NM_000975|RPL11|6135|ribosomal protein L11##NM_001199802|RPL11|6135|ribosomal protein L11##D28357|RPL11|6135|ribosomal protein L11##AK311816|RPL11|6135|ribosomal protein L11##BC018970|RPL11|6135|ribosomal protein L11##NM_003198|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)##AK310229|TCEB3|6924|transcription elongation factor B (SIII), polypeptide 3 (110kDa, elongin A)	0.076939	
chr20	47096109	47096289	reg1036189.p2	3.448	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-680881	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-681447	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-965515	+	AB037836 TSC_hg19_v1_chr20_-_47444291	348087	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	348240	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	442119	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr5	149190274	149190340	reg1044863.p1	3.448	+	AK123614 NM_001172699	-38805	+	TSC_hg19_v1_chr5_+_149109872 AY188949 AY188950 AF468496 AF468497 AY188947 AY188948 AK095391	-80431	+	BC132971 BC132973 BC144251 NM_001172698 NM_133263 TSC_hg19_v1_chr5_+_149109839	-80480	+	BC144044 BC035909 AB593141 M26061 NM_000440	134011	-	TSC_hg19_v1_chr5_+_149340320 NM_000112	150001	+	TSC_hg19_v1_chr5_+_149340352 AK312596	150044	+	AK123614|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172699|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188949|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188950|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468496|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AF468497|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188947|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AY188948|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##AK095391|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132971|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC132973|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144251|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_001172698|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##NM_133263|PPARGC1B|133522|peroxisome proliferator-activated receptor gamma, coactivator 1 beta##BC144044|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##BC035909|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##AB593141|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##M26061|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000440|PDE6A|5145|phosphodiesterase 6A, cGMP-specific, rod, alpha##NM_000112|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2##AK312596|SLC26A2|1836|solute carrier family 26 (sulfate transporter), member 2	0.0	
chr5	35717986	35718124	reg1043990.p2	3.448	+	BC067761 BC016773 NM_024867 NM_144722 TSC_hg19_v1_chr5_+_35617998 EF553528 AK058124 BC110984	-100046	+	NM_000949	-487233	-	M31661 TSC_hg19_v1_chr5_-_35230578 BC059392 AK313270	-487478	-	BC020717 FJ529208 NM_002185 AK301220 BC067537 BC067538 BC067539 BC067540 BC069999 TSC_hg19_v1_chr5_+_35857012 M29696 AK315251	138978	+	NM_001042625 BC017586 NM_144647	220753	-	CU686633 BC068446 AK308046 AK290809 AK057066 AK303770 AK315851 AK296136 NM_152404	273383	-	BC067761|SPEF2|79925|sperm flagellar 2##BC016773|SPEF2|79925|sperm flagellar 2##NM_024867|SPEF2|79925|sperm flagellar 2##NM_144722|SPEF2|79925|sperm flagellar 2##EF553528|SPEF2|79925|sperm flagellar 2##AK058124|SPEF2|79925|sperm flagellar 2##BC110984|SPEF2|79925|sperm flagellar 2##NM_000949|PRLR|5618|prolactin receptor##M31661|PRLR|5618|prolactin receptor##BC059392|PRLR|5618|prolactin receptor##AK313270|PRLR|5618|prolactin receptor##BC020717|IL7R|3575|interleukin 7 receptor##FJ529208|IL7R|3575|interleukin 7 receptor##NM_002185|IL7R|3575|interleukin 7 receptor##AK301220|IL7R|3575|interleukin 7 receptor##BC067537|IL7R|3575|interleukin 7 receptor##BC067538|IL7R|3575|interleukin 7 receptor##BC067539|IL7R|3575|interleukin 7 receptor##BC067540|IL7R|3575|interleukin 7 receptor##BC069999|IL7R|3575|interleukin 7 receptor##M29696|IL7R|3575|interleukin 7 receptor##AK315251|IL7R|3575|interleukin 7 receptor##NM_001042625|CAPSL|133690|calcyphosine-like##BC017586|CAPSL|133690|calcyphosine-like##NM_144647|CAPSL|133690|calcyphosine-like##BC068446|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK308046|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK290809|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK057066|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK303770|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK315851|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##AK296136|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1##NM_152404|UGT3A1|133688|UDP glycosyltransferase 3 family, polypeptide A1	0.054542	
chr5	78196046	78196155	reg1004194.p2	3.448	+	TSC_hg19_v1_chr5_-_77944584 NM_005779	-251534	-	CR936660 TSC_hg19_v1_chr5_-_77845052	-351077	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-389904	-	J05225 TSC_hg19_v1_chr5_-_78281101	84988	-	AK290865 TSC_hg19_v1_chr5_-_78281134	85033	-	TSC_hg19_v1_chr5_-_78281142 AK314903	85046	-	NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B##AK314903|ARSB|411|arylsulfatase B	0.0	
chr7	28447327	28447455	reg1039893.p1	3.448	+	L05913 NM_182899	-108452	+	TSC_hg19_v1_chr7_-_28220424 AK091311 AX746909 NM_175061	-226985	-	TSC_hg19_v1_chr7_-_28220226 AB463807 EU446615 AY372319 BC047229 BC042441	-227190	-	TSC_hg19_v1_chr7_+_28448986 BC087859	1597	+	L05515 NM_182898	4752	+	L05911 NM_004904	27842	+	L05913|CREB5|9586|cAMP responsive element binding protein 5##NM_182899|CREB5|9586|cAMP responsive element binding protein 5##AK091311|JAZF1|221895|JAZF zinc finger 1##NM_175061|JAZF1|221895|JAZF zinc finger 1##EU446615|JAZF1|221895|JAZF zinc finger 1##AY372319|JAZF1|221895|JAZF zinc finger 1##BC047229|JAZF1|221895|JAZF zinc finger 1##BC042441|JAZF1|221895|JAZF zinc finger 1##BC087859|LOC401317|401317|uncharacterized LOC401317##L05515|CREB5|9586|cAMP responsive element binding protein 5##NM_182898|CREB5|9586|cAMP responsive element binding protein 5##L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5	0.0	
chr8	15236179	15236300	reg1029893.p2	3.448	+	NM_139167	-140448	-	AK058131 NM_001007090 BC031245 AF394908 CU689130	-1811814	+	BC054511 AK291682 AK024773 AK225098 AB051510 BC049842 NM_024767 NM_182643	-1863934	-	NM_006765 NM_178234 BC010370 TSC_hg19_v1_chr8_+_15397731	161424	+	TSC_hg19_v1_chr8_+_15397771 U42349 BT020002 DQ892936 DQ896185	161611	+	D90187 TSC_hg19_v1_chr8_-_16050161 AK293409 D90188	813941	-	NM_139167|SGCZ|137868|sarcoglycan, zeta##AK058131|C8orf48|157773|chromosome 8 open reading frame 48##NM_001007090|C8orf48|157773|chromosome 8 open reading frame 48##BC031245|C8orf48|157773|chromosome 8 open reading frame 48##AF394908|C8orf48|157773|chromosome 8 open reading frame 48##BC054511|DLC1|10395|deleted in liver cancer 1##AK291682|DLC1|10395|deleted in liver cancer 1##AK024773|DLC1|10395|deleted in liver cancer 1##AK225098|DLC1|10395|deleted in liver cancer 1##AB051510|DLC1|10395|deleted in liver cancer 1##BC049842|DLC1|10395|deleted in liver cancer 1##NM_024767|DLC1|10395|deleted in liver cancer 1##NM_182643|DLC1|10395|deleted in liver cancer 1##NM_006765|TUSC3|7991|tumor suppressor candidate 3##NM_178234|TUSC3|7991|tumor suppressor candidate 3##BC010370|TUSC3|7991|tumor suppressor candidate 3##U42349|TUSC3|7991|tumor suppressor candidate 3##BT020002|TUSC3|7991|tumor suppressor candidate 3##DQ892936|TUSC3|7991|tumor suppressor candidate 3##DQ896185|TUSC3|7991|tumor suppressor candidate 3##D90187|MSR1|4481|macrophage scavenger receptor 1##AK293409|MSR1|4481|macrophage scavenger receptor 1##D90188|MSR1|4481|macrophage scavenger receptor 1	0.998134	CTCF.p2:-1:0.998
chr8	82312539	82312638	reg1038278.p2	3.448	+	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	-119815	+	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	-288274	-	AK131274 NM_001033723	-525573	-	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	47081	-	AB528797 NM_001080526	61169	-	AB590738 BT006809 CR456903 J02874 TSC_hg19_v1_chr8_-_82395472 BC003672 NM_001442	82850	-	NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2##NM_001080526|FABP9|646480|fatty acid binding protein 9, testis##BT006809|FABP4|2167|fatty acid binding protein 4, adipocyte##CR456903|FABP4|2167|fatty acid binding protein 4, adipocyte##J02874|FABP4|2167|fatty acid binding protein 4, adipocyte##BC003672|FABP4|2167|fatty acid binding protein 4, adipocyte##NM_001442|FABP4|2167|fatty acid binding protein 4, adipocyte	0.723234	CTCF.p2:18:0.723
chr11	50017236	50017334	reg1028650.p1	3.447	+	BC136850 BC136851 NM_001005270	-13215	-	BC137005 NM_001001955	-43343	+	TSC_hg19_v1_chr11_-_49230053 DQ088979 AF176574 BC025672 AK312366 AK295368 AK295470 AK300532 M99487 NM_001014986 NM_001193471 NM_001193472 NM_001193473 NM_004476 S76978	-787178	-	BC140750 NM_001005272	1395162	-	NM_001004703	1497996	+	AF521869 BC001862 NM_024114	5012372	+	BC136850|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC136851|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##NM_001005270|OR4C12|283093|olfactory receptor, family 4, subfamily C, member 12##BC137005|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13##NM_001001955|OR4C13|283092|olfactory receptor, family 4, subfamily C, member 13##DQ088979|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AF176574|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##BC025672|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK312366|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK295368|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK295470|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##AK300532|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##M99487|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001014986|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193471|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193472|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_001193473|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##NM_004476|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##S76978|FOLH1|2346|folate hydrolase (prostate-specific membrane antigen) 1##BC140750|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##NM_001005272|OR4A5|81318|olfactory receptor, family 4, subfamily A, member 5##NM_001004703|OR4C46|119749|olfactory receptor, family 4, subfamily C, member 46##AF521869|TRIM48|79097|tripartite motif containing 48##BC001862|TRIM48|79097|tripartite motif containing 48##NM_024114|TRIM48|79097|tripartite motif containing 48	0.995135	CTCF.p2:23:0.995
chr1	179334966	179335096	reg1036561.p1	3.447	+	BX647935 NM_144696 AK302972	-167	+	TSC_hg19_v1_chr1_+_179262970 BC028940	-72043	+	AK026611 TSC_hg19_v1_chr1_+_179262936 AL833625	-72088	+	AJ279254 NM_014625 BC029141	210045	-	AK126889 NM_001199091 NM_001199085 NM_173533	225720	+	NM_001199089 AK127370 BC130532 BC144058	225975	+	BX647935|AXDND1|126859|axonemal dynein light chain domain containing 1##NM_144696|AXDND1|126859|axonemal dynein light chain domain containing 1##AK302972|AXDND1|126859|axonemal dynein light chain domain containing 1##BC028940|SOAT1|6646|sterol O-acyltransferase 1##AK026611|SOAT1|6646|sterol O-acyltransferase 1##AL833625|SOAT1|6646|sterol O-acyltransferase 1##AJ279254|NPHS2|7827|nephrosis 2, idiopathic, steroid-resistant (podocin)##NM_014625|NPHS2|7827|nephrosis 2, idiopathic, steroid-resistant (podocin)##BC029141|NPHS2|7827|nephrosis 2, idiopathic, steroid-resistant (podocin)##AK126889|TDRD5|163589|tudor domain containing 5##NM_001199091|TDRD5|163589|tudor domain containing 5##NM_001199085|TDRD5|163589|tudor domain containing 5##NM_173533|TDRD5|163589|tudor domain containing 5##NM_001199089|TDRD5|163589|tudor domain containing 5##AK127370|TDRD5|163589|tudor domain containing 5##BC130532|TDRD5|163589|tudor domain containing 5##BC144058|TDRD5|163589|tudor domain containing 5	0.0	
chr1	200964947	200965045	reg1034904.p1	3.447	+	AK316510 NM_001142569 TSC_hg19_v1_chr1_+_200864027 AK303885	-100999	+	TSC_hg19_v1_chr1_+_200860668 NM_018265 AK001583 AK001763 BC106877	-104350	+	BC126386 BC126388 AK315339 NM_005298	-122873	+	AM177180 AB527174 BC137281 BC144557 TSC_hg19_v1_chr1_-_200992598	27558	-	TSC_hg19_v1_chr1_-_200992826 AB007918 NM_001252100 NM_001252102 NM_001252103 NM_017596	27835	-	TSC_hg19_v1_chr1_+_200993085 AK022893 BC037533 BC016656	28091	+	AK316510|C1orf106|55765|chromosome 1 open reading frame 106##NM_001142569|C1orf106|55765|chromosome 1 open reading frame 106##AK303885|C1orf106|55765|chromosome 1 open reading frame 106##NM_018265|C1orf106|55765|chromosome 1 open reading frame 106##AK001583|C1orf106|55765|chromosome 1 open reading frame 106##AK001763|C1orf106|55765|chromosome 1 open reading frame 106##BC106877|C1orf106|55765|chromosome 1 open reading frame 106##BC126386|GPR25|2848|G protein-coupled receptor 25##BC126388|GPR25|2848|G protein-coupled receptor 25##AK315339|GPR25|2848|G protein-coupled receptor 25##NM_005298|GPR25|2848|G protein-coupled receptor 25##AM177180|KIF21B|23046|kinesin family member 21B##BC137281|KIF21B|23046|kinesin family member 21B##BC144557|KIF21B|23046|kinesin family member 21B##AB007918|KIF21B|23046|kinesin family member 21B##NM_001252100|KIF21B|23046|kinesin family member 21B##NM_001252102|KIF21B|23046|kinesin family member 21B##NM_001252103|KIF21B|23046|kinesin family member 21B##NM_017596|KIF21B|23046|kinesin family member 21B	0.196032	
chr1	226369869	226369989	reg1042315.p1	3.447	+	TSC_hg19_v1_chr1_+_226271319 BC032899	-98569	+	TSC_hg19_v1_chr1_+_226250433 BC081560 BC081561	-119496	+	TSC_hg19_v1_chr1_+_226250421 AK291102 AK293541 BC029405 BC067757 BC095447 M11354 BC066901	-119503	+	BC039575 TSC_hg19_v1_chr1_-_226374400	4471	-	AY150218 TSC_hg19_v1_chr1_-_226374401 BC045533 BC060792 NM_022735 AK025520 AK314468 AB043587	4488	-	BC111974 BC113441 BC143784 TSC_hg19_v1_chr1_+_226411364 AF211891 NM_031944	41421	+	BC081560|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC081561|H3F3A|3020|H3 histone, family 3A##AK291102|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##AK293541|H3F3A|3020|H3 histone, family 3A##BC029405|H3F3A|3020|H3 histone, family 3A##BC067757|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC095447|H3F3A|3020|H3 histone, family 3A##M11354|H3F3A|3020|H3 histone, family 3A##BC066901|H3F3AP4|440926|H3 histone, family 3A, pseudogene 4##BC039575|ACBD3|64746|acyl-CoA binding domain containing 3##AY150218|ACBD3|64746|acyl-CoA binding domain containing 3##BC045533|ACBD3|64746|acyl-CoA binding domain containing 3##BC060792|ACBD3|64746|acyl-CoA binding domain containing 3##NM_022735|ACBD3|64746|acyl-CoA binding domain containing 3##AK025520|ACBD3|64746|acyl-CoA binding domain containing 3##AK314468|ACBD3|64746|acyl-CoA binding domain containing 3##AB043587|ACBD3|64746|acyl-CoA binding domain containing 3##BC111974|MIXL1|83881|Mix paired-like homeobox##BC113441|MIXL1|83881|Mix paired-like homeobox##BC143784|MIXL1|83881|Mix paired-like homeobox##AF211891|MIXL1|83881|Mix paired-like homeobox##NM_031944|MIXL1|83881|Mix paired-like homeobox	0.0	
chr13	33002879	33002946	reg1033812.p2	3.447	+	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	-554	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	-113295	+	BC146956 BC146965 NM_001136571	-116823	-	Z36834 TSC_hg19_v1_chr13_-_33112933 BC010643 U50532 AL049783 AK298546 AK312924 NM_014887 NM_033111	110013	-	TSC_hg19_v1_chr13_+_33160588 NM_015032	157651	+	TSC_hg19_v1_chr13_+_33160610 AL137201	157706	+	BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##Z36834|N4BP2L2|10443|NEDD4 binding protein 2-like 2##BC010643|N4BP2L2|10443|NEDD4 binding protein 2-like 2##U50532|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AL049783|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK298546|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK312924|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_014887|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_033111|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_015032|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.0	
chr14	77606103	77606187	reg1039397.p2	3.447	+	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	-41500	+	AK124327 TSC_hg19_v1_chr14_-_77542533	-63612	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-111085	-	BC117676 TSC_hg19_v1_chr14_-_77608072	1870	-	AK294840 TSC_hg19_v1_chr14_-_77608135 AK095612 NM_174976	1990	-	TSC_hg19_v1_chr14_+_77648082 NM_020431	41947	+	NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK294840|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK095612|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_174976|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_020431|TMEM63C|57156|transmembrane protein 63C	0.418485	CTCF.p2:-2:0.418
chr15	38766595	38766696	reg1014334.p2	3.447	+	TSC_hg19_v1_chr15_+_38746352 NM_001042429 NM_173611 AK095745 BC093898	-20300	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	-221623	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	-222250	+	EU832766 GQ129309 AY634315 AY858556 AY954625 AY966005 AF106071 BC109296 BC109297 BC032849 BC067298 AF081195 TSC_hg19_v1_chr15_-_38856997 AK314091 NM_001128602 NM_005739	90286	-	AK093014 AX747856 BC119016 BC119810 NM_207444	222153	+	BX647708 NM_207445 AK096850 BC137300 BC137301 BC171789	776280	+	NM_001042429|FAM98B|283742|family with sequence similarity 98, member B##NM_173611|FAM98B|283742|family with sequence similarity 98, member B##AK095745|FAM98B|283742|family with sequence similarity 98, member B##BC093898|FAM98B|283742|family with sequence similarity 98, member B##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##EU832766|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##GQ129309|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY634315|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY858556|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY954625|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AY966005|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF106071|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109296|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC109297|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC032849|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##BC067298|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AF081195|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK314091|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_001128602|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##NM_005739|RASGRP1|10125|RAS guanyl releasing protein 1 (calcium and DAG-regulated)##AK093014|C15orf53|400359|chromosome 15 open reading frame 53##BC119016|C15orf53|400359|chromosome 15 open reading frame 53##BC119810|C15orf53|400359|chromosome 15 open reading frame 53##NM_207444|C15orf53|400359|chromosome 15 open reading frame 53##BX647708|C15orf54|400360|chromosome 15 open reading frame 54##NM_207445|C15orf54|400360|chromosome 15 open reading frame 54##AK096850|C15orf54|400360|chromosome 15 open reading frame 54##BC137300|C15orf54|400360|chromosome 15 open reading frame 54##BC137301|C15orf54|400360|chromosome 15 open reading frame 54##BC171789|C15orf54|400360|chromosome 15 open reading frame 54	0.0	
chr15	61650224	61650368	reg1037514.p2	3.447	+	TSC_hg19_v1_chr15_-_61521478 NM_134261 U04897	-128799	-	AB307694 TSC_hg19_v1_chr15_-_61521433 BC008831	-128872	-	U04899 U04898 NM_002943 NM_134260	-730611	-	TSC_hg19_v1_chr15_-_62352590 AK307518 AB037842 AJ608770 AJ608771 AJ626860 AJ626861 NM_001018088 NM_017684 NM_018080 NM_020821	702318	-	NM_207322 AF504646	708892	+	NM_001007595	807185	-	NM_134261|RORA|6095|RAR-related orphan receptor A##U04897|RORA|6095|RAR-related orphan receptor A##AB307694|RORA|6095|RAR-related orphan receptor A##BC008831|RORA|6095|RAR-related orphan receptor A##U04899|RORA|6095|RAR-related orphan receptor A##U04898|RORA|6095|RAR-related orphan receptor A##NM_002943|RORA|6095|RAR-related orphan receptor A##NM_134260|RORA|6095|RAR-related orphan receptor A##AK307518|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AB037842|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608770|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ608771|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626860|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##AJ626861|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_001018088|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_017684|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_018080|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_020821|VPS13C|54832|vacuolar protein sorting 13 homolog C (S. cerevisiae)##NM_207322|C2CD4A|145741|C2 calcium-dependent domain containing 4A##AF504646|C2CD4A|145741|C2 calcium-dependent domain containing 4A##NM_001007595|C2CD4B|388125|C2 calcium-dependent domain containing 4B	0.033554	
chr19	39209623	39209707	reg1038458.p2	3.447	+	AK023756 TSC_hg19_v1_chr19_+_39155341	-54390	+	TSC_hg19_v1_chr19_+_39138349 BC005033 GU987085 AB590161 CU678876 DQ431186 DQ893439 DQ896777 D89980	-71294	+	TSC_hg19_v1_chr19_+_39138326 AK299955 AK304554 AK309361 AK309364 BX647098	-71344	+	TSC_hg19_v1_chr19_-_39227632 AK125713	17957	-	AK127398 NM_144691	25448	-	U06643 BC061588 BC073743 L07769 NM_002307	54485	-	BC005033|ACTN4|81|actinin, alpha 4##GU987085|ACTN4|81|actinin, alpha 4##DQ431186|ACTN4|81|actinin, alpha 4##DQ893439|ACTN4|81|actinin, alpha 4##DQ896777|ACTN4|81|actinin, alpha 4##D89980|ACTN4|81|actinin, alpha 4##AK299955|ACTN4|81|actinin, alpha 4##AK304554|ACTN4|81|actinin, alpha 4##AK309361|ACTN4|81|actinin, alpha 4##AK309364|ACTN4|81|actinin, alpha 4##BX647098|ACTN4|81|actinin, alpha 4##AK125713|CAPN12|147968|calpain 12##AK127398|CAPN12|147968|calpain 12##NM_144691|CAPN12|147968|calpain 12##U06643|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC061588|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC073743|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##L07769|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##NM_002307|LGALS7|3963|lectin, galactoside-binding, soluble, 7	0.668477	CTCF.p2:19:0.668
chr2	122513061	122513174	reg1034567.p1	3.447	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-18652	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-105472	+	TSC_hg19_v1_chr2_-_122407024 BC112940 AK091140 AX746802 BC132723 BC144107 AK299331 AJ288057 NM_001142273 NM_001142274 NM_001207051 NM_015282	-106095	-	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	120	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	2269747	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	4900590	+	DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##BC112940|CLASP1|23332|cytoplasmic linker associated protein 1##AK091140|CLASP1|23332|cytoplasmic linker associated protein 1##BC132723|CLASP1|23332|cytoplasmic linker associated protein 1##BC144107|CLASP1|23332|cytoplasmic linker associated protein 1##AK299331|CLASP1|23332|cytoplasmic linker associated protein 1##AJ288057|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142273|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001142274|CLASP1|23332|cytoplasmic linker associated protein 1##NM_001207051|CLASP1|23332|cytoplasmic linker associated protein 1##NM_015282|CLASP1|23332|cytoplasmic linker associated protein 1##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)	0.0	
chr6	41755093	41755204	reg1016241.p3	3.447	+	TSC_hg19_v1_chr6_+_41754422 AJ420506	-699	+	AL137721 NM_013397 TSC_hg19_v1_chr6_+_41748522 BC027896 AK057184	-6563	+	TSC_hg19_v1_chr6_-_41747644 NM_006653	-7459	-	NM_001134493	32	+	TSC_hg19_v1_chr6_+_41755397 BC015975	241	+	BC107435 AF216754 TSC_hg19_v1_chr6_+_41755425 BC018624 BC067252 BC022274 AB435319 L34839	285	+	AJ420506|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##NM_013397|PRICKLE4|29964|prickle homolog 4 (Drosophila)##NM_006653|FRS3|10817|fibroblast growth factor receptor substrate 3##NM_001134493|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC015975|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC107435|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AF216754|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC018624|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC067252|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##BC022274|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##AB435319|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)##L34839|TOMM6|100188893|translocase of outer mitochondrial membrane 6 homolog (yeast)	0.0	
chr9	130627522	130627640	reg1034989.p2	3.447	+	TSC_hg19_v1_chr9_-_130617036 NM_000118 NM_001114753	-10554	-	TSC_hg19_v1_chr9_-_130616968 AK222669 AK302455	-10606	-	TSC_hg19_v1_chr9_-_130616938 BC014271 BC020391 X72012 AK290389 AK300156	-10725	-	BC001116 BC036803 AK313758 TSC_hg19_v1_chr9_-_130639955 BC100022 NM_000476	12399	-	AK300534 TSC_hg19_v1_chr9_-_130659688 AK057100	32047	-	TSC_hg19_v1_chr9_-_130661803 AK226174	34218	-	NM_000118|ENG|2022|endoglin##NM_001114753|ENG|2022|endoglin##AK222669|ENG|2022|endoglin##AK302455|ENG|2022|endoglin##BC014271|ENG|2022|endoglin##BC020391|ENG|2022|endoglin##X72012|ENG|2022|endoglin##AK290389|ENG|2022|endoglin##AK300156|ENG|2022|endoglin##BC001116|AK1|203|adenylate kinase 1##BC036803|AK1|203|adenylate kinase 1##AK313758|AK1|203|adenylate kinase 1##BC100022|AK1|203|adenylate kinase 1##NM_000476|AK1|203|adenylate kinase 1##AK300534|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK057100|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6##AK226174|ST6GALNAC6|30815|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	0.0	
chr11	1283779	1283886	reg1033781.p2	3.446	+	TSC_hg19_v1_chr11_+_1244340 AF086604	-39496	+	TSC_hg19_v1_chr11_+_1244295 NM_002458 AK310939	-39536	+	TSC_hg19_v1_chr11_+_1213469 Z48314	-70358	+	TSC_hg19_v1_chr11_-_1330680 AY730683 CR533477 AB590101 DQ891802 DQ894986 AM393373	46874	-	BC018272 BC012057 TSC_hg19_v1_chr11_-_1330832 AB209541 AJ242972 AL136835	46991	-	TSC_hg19_v1_chr11_-_1330861 AK096693 BC004420 AK090850 AK315592	47021	-	AF086604|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##NM_002458|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##AK310939|MUC5B|727897|mucin 5B, oligomeric mucus/gel-forming##Z48314|MUC5AC|4586|mucin 5AC, oligomeric mucus/gel-forming##AY730683|TOLLIP|54472|toll interacting protein##CR533477|TOLLIP|54472|toll interacting protein##DQ891802|TOLLIP|54472|toll interacting protein##DQ894986|TOLLIP|54472|toll interacting protein##AM393373|TOLLIP|54472|toll interacting protein##BC018272|TOLLIP|54472|toll interacting protein##BC012057|TOLLIP|54472|toll interacting protein##AB209541|TOLLIP|54472|toll interacting protein##AJ242972|TOLLIP|54472|toll interacting protein##AL136835|TOLLIP|54472|toll interacting protein##AK096693|TOLLIP|54472|toll interacting protein##BC004420|TOLLIP|54472|toll interacting protein##AK090850|TOLLIP|54472|toll interacting protein##AK315592|TOLLIP|54472|toll interacting protein	0.0	
chr1	32799080	32799180	reg1040403.p1	3.446	+	TSC_hg19_v1_chr1_+_32757740 BC000301 AK299792 AY627042 AB451297 AB451430 AB463736 CR541717 CU674144 DQ891398 DQ894577	-41390	+	D50405 NM_004964 TSC_hg19_v1_chr1_+_32757707	-41422	+	AK225555 TSC_hg19_v1_chr1_+_32757704 AK296308 AK313061	-41427	+	TSC_hg19_v1_chr1_-_32801835 AB528178 CU688192 AM393505 DQ893237 DQ896567 X70326 AL713653 AY007131 BC007904 BC066915 NM_023009	2601	-	BC035354 NM_052841	28699	+	NM_001167676	28713	-	BC000301|HDAC1|3065|histone deacetylase 1##AK299792|HDAC1|3065|histone deacetylase 1##AY627042|HDAC1|3065|histone deacetylase 1##AB451297|HDAC1|3065|histone deacetylase 1##AB451430|HDAC1|3065|histone deacetylase 1##CR541717|HDAC1|3065|histone deacetylase 1##DQ891398|HDAC1|3065|histone deacetylase 1##DQ894577|HDAC1|3065|histone deacetylase 1##D50405|HDAC1|3065|histone deacetylase 1##NM_004964|HDAC1|3065|histone deacetylase 1##AK225555|HDAC1|3065|histone deacetylase 1##AK296308|HDAC1|3065|histone deacetylase 1##AK313061|HDAC1|3065|histone deacetylase 1##AM393505|MARCKSL1|65108|MARCKS-like 1##DQ893237|MARCKSL1|65108|MARCKS-like 1##DQ896567|MARCKSL1|65108|MARCKS-like 1##X70326|MARCKSL1|65108|MARCKS-like 1##AL713653|MARCKSL1|65108|MARCKS-like 1##AY007131|MARCKSL1|65108|MARCKS-like 1##BC007904|MARCKSL1|65108|MARCKS-like 1##BC066915|MARCKSL1|65108|MARCKS-like 1##NM_023009|MARCKSL1|65108|MARCKS-like 1##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071	0.0	
chr1	32803094	32803181	reg1033212.p1	3.446	+	TSC_hg19_v1_chr1_-_32801835 AB528178 CU688192 AM393505 DQ893237 DQ896567 X70326 AL713653 AY007131 BC007904 BC066915 NM_023009	-1406	-	TSC_hg19_v1_chr1_+_32757740 BC000301 AK299792 AY627042 AB451297 AB451430 AB463736 CR541717 CU674144 DQ891398 DQ894577	-45397	+	D50405 NM_004964 TSC_hg19_v1_chr1_+_32757707	-45429	+	BC035354 NM_052841	24692	+	NM_001167676	24706	-	CR457252 TSC_hg19_v1_chr1_-_32860030 BC010573 CR749228 BX641056 AK300231 BC026322 AK297604 AK300306 AK001138 AK225717 AK293454 BC028381 AK021440 AK297352 AK225026 AK304477 AK316172 NM_001143888 NM_001143889 NM_001143890 NM_018045	56900	-	AM393505|MARCKSL1|65108|MARCKS-like 1##DQ893237|MARCKSL1|65108|MARCKS-like 1##DQ896567|MARCKSL1|65108|MARCKS-like 1##X70326|MARCKSL1|65108|MARCKS-like 1##AL713653|MARCKSL1|65108|MARCKS-like 1##AY007131|MARCKSL1|65108|MARCKS-like 1##BC007904|MARCKSL1|65108|MARCKS-like 1##BC066915|MARCKSL1|65108|MARCKS-like 1##NM_023009|MARCKSL1|65108|MARCKS-like 1##BC000301|HDAC1|3065|histone deacetylase 1##AK299792|HDAC1|3065|histone deacetylase 1##AY627042|HDAC1|3065|histone deacetylase 1##AB451297|HDAC1|3065|histone deacetylase 1##AB451430|HDAC1|3065|histone deacetylase 1##CR541717|HDAC1|3065|histone deacetylase 1##DQ891398|HDAC1|3065|histone deacetylase 1##DQ894577|HDAC1|3065|histone deacetylase 1##D50405|HDAC1|3065|histone deacetylase 1##NM_004964|HDAC1|3065|histone deacetylase 1##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071##CR457252|BSDC1|55108|BSD domain containing 1##BC010573|BSDC1|55108|BSD domain containing 1##CR749228|BSDC1|55108|BSD domain containing 1##BX641056|BSDC1|55108|BSD domain containing 1##AK300231|BSDC1|55108|BSD domain containing 1##BC026322|BSDC1|55108|BSD domain containing 1##AK297604|BSDC1|55108|BSD domain containing 1##AK300306|BSDC1|55108|BSD domain containing 1##AK001138|BSDC1|55108|BSD domain containing 1##AK225717|BSDC1|55108|BSD domain containing 1##AK293454|BSDC1|55108|BSD domain containing 1##BC028381|BSDC1|55108|BSD domain containing 1##AK021440|BSDC1|55108|BSD domain containing 1##AK297352|BSDC1|55108|BSD domain containing 1##AK225026|BSDC1|55108|BSD domain containing 1##AK304477|BSDC1|55108|BSD domain containing 1##AK316172|BSDC1|55108|BSD domain containing 1##NM_001143888|BSDC1|55108|BSD domain containing 1##NM_001143889|BSDC1|55108|BSD domain containing 1##NM_001143890|BSDC1|55108|BSD domain containing 1##NM_018045|BSDC1|55108|BSD domain containing 1	0.0	
chr13	31038295	31038461	reg1034549.p1	3.446	+	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-156809	-	TSC_hg19_v1_chr13_-_30881141 AK097423 NM_001014380	-157227	-	TSC_hg19_v1_chr13_-_30424811 NM_007106	-613537	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	1615	-	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	1680	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	153249	-	AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##AK097423|KATNAL1|84056|katanin p60 subunit A-like 1##NM_001014380|KATNAL1|84056|katanin p60 subunit A-like 1##NM_007106|UBL3|5412|ubiquitin-like 3##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1	0.019964	
chr13	80868651	80868764	reg1033419.p2	3.446	+	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-813152	+	TSC_hg19_v1_chr13_+_80055411 AK297197 AK001723	-813285	+	TSC_hg19_v1_chr13_+_80055257 NM_001161407 NM_019080 AB097019 AB097028 AB097029	-813436	+	BC004205 TSC_hg19_v1_chr13_-_80913114	44335	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	46357	-	TSC_hg19_v1_chr13_-_84456424 BC051738	3587718	-	AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##AK297197|NDFIP2|54602|Nedd4 family interacting protein 2##AK001723|NDFIP2|54602|Nedd4 family interacting protein 2##NM_001161407|NDFIP2|54602|Nedd4 family interacting protein 2##NM_019080|NDFIP2|54602|Nedd4 family interacting protein 2##AB097019|NDFIP2|54602|Nedd4 family interacting protein 2##AB097028|NDFIP2|54602|Nedd4 family interacting protein 2##AB097029|NDFIP2|54602|Nedd4 family interacting protein 2##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1	0.0	
chr15	33915332	33915399	reg1031183.p1	3.446	+	AB001025 TSC_hg19_v1_chr15_+_33603167 AJ001515 NM_001036 NM_001243996	-312196	+	NM_001103184 BC101971 BC103692 BC107593 TSC_hg19_v1_chr15_-_33360376 AL833157	-555130	-	TSC_hg19_v1_chr15_-_33011125 AK093166 AX747968	-904199	-	TSC_hg19_v1_chr15_-_34212524 BC037796	297193	-	AK095198 NM_012125	345723	+	TSC_hg19_v1_chr15_-_34331329 BC063533 AF283508 BC010488 NM_020371	415947	-	AB001025|RYR3|6263|ryanodine receptor 3##AJ001515|RYR3|6263|ryanodine receptor 3##NM_001036|RYR3|6263|ryanodine receptor 3##NM_001243996|RYR3|6263|ryanodine receptor 3##NM_001103184|FMN1|342184|formin 1##BC103692|FMN1|342184|formin 1##BC107593|FMN1|342184|formin 1##AL833157|FMN1|342184|formin 1##AK095198|CHRM5|1133|cholinergic receptor, muscarinic 5##NM_012125|CHRM5|1133|cholinergic receptor, muscarinic 5##BC063533|AVEN|57099|apoptosis, caspase activation inhibitor##AF283508|AVEN|57099|apoptosis, caspase activation inhibitor##BC010488|AVEN|57099|apoptosis, caspase activation inhibitor##NM_020371|AVEN|57099|apoptosis, caspase activation inhibitor	0.0	
chr16	81889522	81889611	reg1038114.p2	3.446	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	-76636	+	TSC_hg19_v1_chr16_+_81812901 AB208914	-76664	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	-76669	+	BC019670 AK315652 AK026740 NM_145168	155502	-	TSC_hg19_v1_chr16_+_82068882 NM_002153 AK223001 AK313109	179295	+	TSC_hg19_v1_chr16_+_82068927 BC009581 BC059170 L11708	179366	+	BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC019670|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK315652|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##AK026740|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_145168|SDR42E1|93517|short chain dehydrogenase/reductase family 42E, member 1##NM_002153|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK223001|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##AK313109|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC009581|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##BC059170|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2##L11708|HSD17B2|3294|hydroxysteroid (17-beta) dehydrogenase 2	0.665021	CTCF.p2:2:0.665
chr18	31879774	31879840	reg1030970.p1	3.446	+	AB017800 NM_001198546 NM_001198548 NM_003787	-76293	-	AK297185 BC000313 TSC_hg19_v1_chr18_-_31803319	-76564	-	NM_001198547	-77374	-	TSC_hg19_v1_chr18_+_32073264 NM_001198945 NM_001392 NM_032975 NM_032979 AK294746 U26742	193457	+	AJ009668 TSC_hg19_v1_chr18_+_32073374	193556	+	NM_001128175 NM_001198938 NM_001198939 NM_001198940 AK308410 AL833285 BC005300 AB209102	293497	+	AB017800|NOL4|8715|nucleolar protein 4##NM_001198546|NOL4|8715|nucleolar protein 4##NM_001198548|NOL4|8715|nucleolar protein 4##NM_003787|NOL4|8715|nucleolar protein 4##AK297185|NOL4|8715|nucleolar protein 4##BC000313|NOL4|8715|nucleolar protein 4##NM_001198547|NOL4|8715|nucleolar protein 4##NM_001198945|DTNA|1837|dystrobrevin, alpha##NM_001392|DTNA|1837|dystrobrevin, alpha##NM_032975|DTNA|1837|dystrobrevin, alpha##NM_032979|DTNA|1837|dystrobrevin, alpha##AK294746|DTNA|1837|dystrobrevin, alpha##U26742|DTNA|1837|dystrobrevin, alpha##AJ009668|DTNA|1837|dystrobrevin, alpha##NM_001128175|DTNA|1837|dystrobrevin, alpha##NM_001198938|DTNA|1837|dystrobrevin, alpha##NM_001198939|DTNA|1837|dystrobrevin, alpha##NM_001198940|DTNA|1837|dystrobrevin, alpha##AK308410|DTNA|1837|dystrobrevin, alpha##AL833285|DTNA|1837|dystrobrevin, alpha##BC005300|DTNA|1837|dystrobrevin, alpha##AB209102|DTNA|1837|dystrobrevin, alpha	0.0	
chr1	9327783	9327963	reg1007214.p3	3.446	+	CR749282 TSC_hg19_v1_chr1_+_9299950	-27935	+	TSC_hg19_v1_chr1_+_9294863 AJ012590 NM_004285	-32956	+	TSC_hg19_v1_chr1_+_9294832 BC081559	-33058	+	TSC_hg19_v1_chr1_+_9352934 AK026046 AK225417 NM_025106	25064	+	TSC_hg19_v1_chr1_+_9352956 AB209559 BC015711	25096	+	TSC_hg19_v1_chr1_+_9415945 CU677397	88073	+	CR749282|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AJ012590|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##NM_004285|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##BC081559|H6PD|9563|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)##AK026046|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AK225417|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##NM_025106|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##AB209559|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1##BC015711|SPSB1|80176|splA/ryanodine receptor domain and SOCS box containing 1	0.0	
chr19	36419711	36419891	reg1028917.p2	3.446	+	TSC_hg19_v1_chr19_-_36399212 NM_001173514 NM_001173515 NM_003332 NM_198125	-20588	-	TSC_hg19_v1_chr19_-_36399198 AF019562 BC011175 AK290385	-20609	-	TSC_hg19_v1_chr19_-_36399181 BT009851 CR450342 CR542202 AB590208 AY074782 CU679890 DQ891092 DQ894274 AJ010098	-20651	-	BC003578 NM_024509	8220	+	TSC_hg19_v1_chr19_+_36486091 NM_001042631 BC007205 BC064605 BC069054 BC137516 BC137517	66293	+	CU690916 AK093764 AX748293 NM_001039876 BC052573 BC038360	79837	-	NM_001173514|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_001173515|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_003332|TYROBP|7305|TYRO protein tyrosine kinase binding protein##NM_198125|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AF019562|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BC011175|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AK290385|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BT009851|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR450342|TYROBP|7305|TYRO protein tyrosine kinase binding protein##CR542202|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AY074782|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ891092|TYROBP|7305|TYRO protein tyrosine kinase binding protein##DQ894274|TYROBP|7305|TYRO protein tyrosine kinase binding protein##AJ010098|TYROBP|7305|TYRO protein tyrosine kinase binding protein##BC003578|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_024509|LRFN3|79414|leucine rich repeat and fibronectin type III domain containing 3##NM_001042631|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC007205|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC064605|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC069054|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137516|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##BC137517|SDHAF1|644096|succinate dehydrogenase complex assembly factor 1##AK093764|C19orf46|163183|chromosome 19 open reading frame 46##NM_001039876|C19orf46|163183|chromosome 19 open reading frame 46##BC052573|C19orf46|163183|chromosome 19 open reading frame 46##BC038360|C19orf46|163183|chromosome 19 open reading frame 46	0.0	
chr2	43454921	43455012	reg1027787.p5	3.446	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-1224	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-1236	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-1621	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	368182	-	TSC_hg19_v1_chr2_+_43864411 BC063310	409447	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	409473	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.0	
chr3	13938506	13938601	reg1008938.p2	3.446	+	BC008811 NM_004625	-16936	-	AK304827 NM_001165035	-328314	+	TSC_hg19_v1_chr3_+_13590656 BC051690 AY130459 X82494	-347890	+	TSC_hg19_v1_chr3_-_14166228 BC017082	227680	-	TSC_hg19_v1_chr3_-_14166250 BC033775	227697	-	TSC_hg19_v1_chr3_-_14166360 AK290764 AK056271	227773	-	BC008811|WNT7A|7476|wingless-type MMTV integration site family, member 7A##NM_004625|WNT7A|7476|wingless-type MMTV integration site family, member 7A##AK304827|FBLN2|2199|fibulin 2##NM_001165035|FBLN2|2199|fibulin 2##BC051690|FBLN2|2199|fibulin 2##AY130459|FBLN2|2199|fibulin 2##X82494|FBLN2|2199|fibulin 2##BC017082|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##BC033775|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##AK290764|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4##AK056271|CHCHD4|131474|coiled-coil-helix-coiled-coil-helix domain containing 4	0.0	
chr6	13466129	13466295	reg1043247.p1	3.446	+	AK027010 NM_001242630	-57844	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	-137512	-	AK091836 AX747210 NM_001242698	-170395	-	AK055131 AF264036 NM_001242628	20186	-	TSC_hg19_v1_chr6_-_13487051 BC148295 BC119005 BC124557	20885	-	TSC_hg19_v1_chr6_-_13487810 AK000337 NM_001242629 NM_018988	21646	-	AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AK055131|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF264036|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242628|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC148295|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC119005|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC124557|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AK000337|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242629|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_018988|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr7	154983743	154983893	reg1036335.p2	3.446	+	BC112021 BC113468 NM_024012 AB464445 AF498985 HQ258207	-121241	+	TSC_hg19_v1_chr7_+_154795161 BC035068 BC048116 AL713756	-188607	+	TSC_hg19_v1_chr7_-_154794664 AK293744 AK123600 NM_007349 AK307417	-189148	-	TSC_hg19_v1_chr7_+_155089559 NM_005542 NM_198336 NM_198337 BC001880	105704	+	AK291675 TSC_hg19_v1_chr7_+_155089667	105826	+	TSC_hg19_v1_chr7_+_155250705 BC104970 BC104972 NM_001427	266946	+	BC112021|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC113468|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##NM_024012|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##AF498985|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##HQ258207|HTR5A|3361|5-hydroxytryptamine (serotonin) receptor 5A##BC035068|LOC202781|202781|uncharacterized LOC202781##BC048116|LOC202781|202781|uncharacterized LOC202781##AL713756|LOC202781|202781|uncharacterized LOC202781##AK293744|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK123600|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_007349|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##AK307417|PAXIP1|22976|PAX interacting (with transcription-activation domain) protein 1##NM_005542|INSIG1|3638|insulin induced gene 1##NM_198336|INSIG1|3638|insulin induced gene 1##NM_198337|INSIG1|3638|insulin induced gene 1##BC001880|INSIG1|3638|insulin induced gene 1##AK291675|INSIG1|3638|insulin induced gene 1##BC104970|EN2|2020|engrailed homeobox 2##BC104972|EN2|2020|engrailed homeobox 2##NM_001427|EN2|2020|engrailed homeobox 2	0.0	
chr7	4838025	4838206	reg1004182.p2	3.446	+	TSC_hg19_v1_chr7_+_4815296 AB007875	-22829	+	TSC_hg19_v1_chr7_+_4815264 NM_014855 BC037399	-22854	+	TSC_hg19_v1_chr7_+_4722091 AX721089 AK302243 AK122663	-115864	+	DQ891226 DQ894411 AF218840 BC036653 NM_020144 TSC_hg19_v1_chr7_-_4901662 AK312788	63434	-	TSC_hg19_v1_chr7_-_4923339 AK302549 AB058752 AK294745 NM_018059	85177	-	AY424288 BC037881 BC048346 TSC_hg19_v1_chr7_-_4998841 AK094524 BC067905 NM_001100600 NM_198403	160684	-	AB007875|KIAA0415|9907|KIAA0415##NM_014855|KIAA0415|9907|KIAA0415##BC037399|KIAA0415|9907|KIAA0415##AK302243|FOXK1|221937|forkhead box K1##AK122663|FOXK1|221937|forkhead box K1##DQ891226|PAPOLB|56903|poly(A) polymerase beta (testis specific)##DQ894411|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AF218840|PAPOLB|56903|poly(A) polymerase beta (testis specific)##BC036653|PAPOLB|56903|poly(A) polymerase beta (testis specific)##NM_020144|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AK312788|PAPOLB|56903|poly(A) polymerase beta (testis specific)##AK302549|RADIL|55698|Ras association and DIL domains##AB058752|RADIL|55698|Ras association and DIL domains##AK294745|RADIL|55698|Ras association and DIL domains##NM_018059|RADIL|55698|Ras association and DIL domains##AY424288|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC037881|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC048346|MMD2|221938|monocyte to macrophage differentiation-associated 2##AK094524|MMD2|221938|monocyte to macrophage differentiation-associated 2##BC067905|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_001100600|MMD2|221938|monocyte to macrophage differentiation-associated 2##NM_198403|MMD2|221938|monocyte to macrophage differentiation-associated 2	0.18283	
chr9	130159457	130159575	reg1008694.p1	3.446	+	TSC_hg19_v1_chr9_+_130159479 BC019043 NM_014580 Y17801 AJ245937 DQ892909 DQ896160 AF289587	-70	+	NM_032293 AK293732 AK095679	-132709	+	TSC_hg19_v1_chr9_-_129885015 NM_012098 AY358274	-274486	-	TSC_hg19_v1_chr9_-_130186602 AK124330	27050	-	NM_007135 TSC_hg19_v1_chr9_+_130186700 AK054606 BC062309 AK302284	27165	+	TSC_hg19_v1_chr9_+_130186718 AK316233	27205	+	BC019043|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_014580|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##Y17801|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AJ245937|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ892909|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##DQ896160|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##AF289587|SLC2A8|29988|solute carrier family 2 (facilitated glucose transporter), member 8##NM_032293|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK293732|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##AK095679|GARNL3|84253|GTPase activating Rap/RanGAP domain-like 3##NM_012098|ANGPTL2|23452|angiopoietin-like 2##AY358274|ANGPTL2|23452|angiopoietin-like 2##NM_007135|ZNF79|7633|zinc finger protein 79##AK054606|ZNF79|7633|zinc finger protein 79##BC062309|ZNF79|7633|zinc finger protein 79##AK302284|ZNF79|7633|zinc finger protein 79##AK316233|ZNF79|7633|zinc finger protein 79	0.038595	
chr10	101780454	101780572	reg1040465.p1	3.445	+	TSC_hg19_v1_chr10_-_101769671 AL833283 NM_015221	-10852	-	BC020878 TSC_hg19_v1_chr10_-_101690657 AK128576	-89810	-	TSC_hg19_v1_chr10_+_101542570 X96395 BC136419 U63970	-237950	+	X14329 BC027897 NM_001308 AK313972	61112	-	TSC_hg19_v1_chr10_-_101945727 NM_006459 AK222480 AK298427 AK315580	165223	-	TSC_hg19_v1_chr10_-_101945787 AF064093 NM_001100626	165289	-	AL833283|DNMBP|23268|dynamin binding protein##NM_015221|DNMBP|23268|dynamin binding protein##AK128576|DNMBP|23268|dynamin binding protein##X96395|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##BC136419|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##U63970|ABCC2|1244|ATP-binding cassette, sub-family C (CFTR/MRP), member 2##X14329|CPN1|1369|carboxypeptidase N, polypeptide 1##BC027897|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_001308|CPN1|1369|carboxypeptidase N, polypeptide 1##AK313972|CPN1|1369|carboxypeptidase N, polypeptide 1##NM_006459|ERLIN1|10613|ER lipid raft associated 1##AK222480|ERLIN1|10613|ER lipid raft associated 1##AK298427|ERLIN1|10613|ER lipid raft associated 1##AK315580|ERLIN1|10613|ER lipid raft associated 1##AF064093|ERLIN1|10613|ER lipid raft associated 1##NM_001100626|ERLIN1|10613|ER lipid raft associated 1	0.0	
chr11	92545924	92546057	reg1038265.p1	3.445	+	NM_001008781	-460729	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-2561580	+	AK290231 NM_001144073 NM_012124	-2589459	-	BC069163 NM_005959 U25341 AY521019	156849	+	TSC_hg19_v1_chr11_-_92930978 CU690400	384997	-	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	385095	-	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4	0.123884	
chr12	679212	679393	reg1004312.p2	3.445	+	AB089940 NM_173593	-109760	+	NM_001130146 NM_032358 AK293165 TSC_hg19_v1_chr12_+_510809 AK027638	-168521	+	TSC_hg19_v1_chr12_-_498451 AK301150 AK301273 AB209999 BC048307 BC053893 NM_001042603 BC092417	-180700	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	72876	+	TSC_hg19_v1_chr12_-_752800 AK298043	73517	-	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	93413	-	AB089940|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_173593|B4GALNT3|283358|beta-1,4-N-acetyl-galactosaminyl transferase 3##NM_001130146|CCDC77|84318|coiled-coil domain containing 77##NM_032358|CCDC77|84318|coiled-coil domain containing 77##AK293165|CCDC77|84318|coiled-coil domain containing 77##AK027638|CCDC77|84318|coiled-coil domain containing 77##AK301150|KDM5A|5927|lysine (K)-specific demethylase 5A##AK301273|KDM5A|5927|lysine (K)-specific demethylase 5A##AB209999|KDM5A|5927|lysine (K)-specific demethylase 5A##BC048307|KDM5A|5927|lysine (K)-specific demethylase 5A##BC053893|KDM5A|5927|lysine (K)-specific demethylase 5A##NM_001042603|KDM5A|5927|lysine (K)-specific demethylase 5A##BC092417|KDM5A|5927|lysine (K)-specific demethylase 5A##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2	0.0	
chr12	89556585	89556707	reg1046148.p2	3.445	+	BC074725 AK293002 AF119835 AF400437 BC126166 BC143899 BC069797 BC069733 BC069783 TSC_hg19_v1_chr12_-_88974249 AF400436 M59964 AK290319 NM_000899 NM_003994	-582474	-	TSC_hg19_v1_chr12_+_88536083 AK290436 AK302755 AK310375 AK310393 NM_181783 CR749309 BX538169 CR749244 CR933632 AJ697717 BC117177 BC117175	-1020498	+	BC043398 TSC_hg19_v1_chr12_-_88535871 AK023677 DQ109808 NM_025114	-1020777	-	TSC_hg19_v1_chr12_+_89744716 AK124265	188106	+	TSC_hg19_v1_chr12_-_89745782 AB451265 AB451393 BT006895 CU678402 AB463588 DQ892490 DQ895701	189139	-	TSC_hg19_v1_chr12_-_89746181 BC003143 BC003562 AB013382 AB013602 X93920 AK222882	189445	-	BC074725|KITLG|4254|KIT ligand##AK293002|KITLG|4254|KIT ligand##AF119835|KITLG|4254|KIT ligand##AF400437|KITLG|4254|KIT ligand##BC126166|KITLG|4254|KIT ligand##BC143899|KITLG|4254|KIT ligand##BC069797|KITLG|4254|KIT ligand##BC069733|KITLG|4254|KIT ligand##BC069783|KITLG|4254|KIT ligand##AF400436|KITLG|4254|KIT ligand##M59964|KITLG|4254|KIT ligand##AK290319|KITLG|4254|KIT ligand##NM_000899|KITLG|4254|KIT ligand##NM_003994|KITLG|4254|KIT ligand##AK290436|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK302755|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310375|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AK310393|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##NM_181783|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749309|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BX538169|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR749244|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##CR933632|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##AJ697717|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117177|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC117175|TMTC3|160418|transmembrane and tetratricopeptide repeat containing 3##BC043398|CEP290|80184|centrosomal protein 290kDa##AK023677|CEP290|80184|centrosomal protein 290kDa##DQ109808|CEP290|80184|centrosomal protein 290kDa##NM_025114|CEP290|80184|centrosomal protein 290kDa##AK124265|LOC100131490|100131490|uncharacterized LOC100131490##AB451265|DUSP6|1848|dual specificity phosphatase 6##AB451393|DUSP6|1848|dual specificity phosphatase 6##BT006895|DUSP6|1848|dual specificity phosphatase 6##DQ892490|DUSP6|1848|dual specificity phosphatase 6##DQ895701|DUSP6|1848|dual specificity phosphatase 6##BC003143|DUSP6|1848|dual specificity phosphatase 6##BC003562|DUSP6|1848|dual specificity phosphatase 6##AB013382|DUSP6|1848|dual specificity phosphatase 6##AB013602|DUSP6|1848|dual specificity phosphatase 6##X93920|DUSP6|1848|dual specificity phosphatase 6##AK222882|DUSP6|1848|dual specificity phosphatase 6	0.0	
chr1	41514745	41514844	reg1039566.p1	3.445	+	BC022037 AK292296 BC037879 NM_001168247 AK097609 NM_144990	-27388	-	TSC_hg19_v1_chr1_+_41445419 AK299122 X52142 AK225899	-69360	+	AK297386 TSC_hg19_v1_chr1_+_41445376	-69414	+	AK301497 AK299383 NM_001172222	110777	-	BC009752 NM_001031694	112280	-	BC021252 NM_001172221	113894	-	BC022037|SLFNL1|200172|schlafen-like 1##AK292296|SLFNL1|200172|schlafen-like 1##BC037879|SLFNL1|200172|schlafen-like 1##NM_001168247|SLFNL1|200172|schlafen-like 1##AK097609|SLFNL1|200172|schlafen-like 1##NM_144990|SLFNL1|200172|schlafen-like 1##AK299122|CTPS|1503|CTP synthase##X52142|CTPS|1503|CTP synthase##AK225899|CTPS|1503|CTP synthase##AK297386|CTPS|1503|CTP synthase##AK301497|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##AK299383|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172222|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC009752|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001031694|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##BC021252|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)##NM_001172221|SCMH1|22955|sex comb on midleg homolog 1 (Drosophila)	0.0	
chr14	61897173	61897272	reg1026465.p2	3.445	+	TSC_hg19_v1_chr14_+_61788448 AX775933 BC037268 AK290183 NM_006255 M55284	-108695	+	TSC_hg19_v1_chr14_-_61748521 NM_001017970	-148700	-	AK309281 TSC_hg19_v1_chr14_-_61748195	-149028	-	TSC_hg19_v1_chr14_+_62162237 NM_001530 NM_181054 AK296876 AK304436 AK299551 AK304315 BX648795 BC012527 U29165 AK312397	264968	+	FJ790247 NM_001243084	267117	+	TSC_hg19_v1_chr14_+_62229134 AK314933 NM_003082 Z47542 BC014984 U44754 BC019038 AB464223 DQ892683 DQ895926	331897	+	AX775933|PRKCH|5583|protein kinase C, eta##BC037268|PRKCH|5583|protein kinase C, eta##AK290183|PRKCH|5583|protein kinase C, eta##NM_006255|PRKCH|5583|protein kinase C, eta##M55284|PRKCH|5583|protein kinase C, eta##NM_001017970|TMEM30B|161291|transmembrane protein 30B##NM_001530|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_181054|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK296876|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304436|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK299551|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK304315|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BX648795|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##BC012527|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##U29165|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK312397|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##FJ790247|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##NM_001243084|HIF1A|3091|hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)##AK314933|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##NM_003082|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##Z47542|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC014984|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##U44754|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##BC019038|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ892683|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa##DQ895926|SNAPC1|6617|small nuclear RNA activating complex, polypeptide 1, 43kDa	0.0	
chr16	2867142	2867245	reg1046030.p1	3.445	+	NM_006799 NM_144956 NM_144957 AB031331 TSC_hg19_v1_chr16_+_2867207	-8	+	NM_001135086	-18708	+	AF536382 BC062334 NM_152891 AX721175	-30470	-	BC074999 BC075000 TSC_hg19_v1_chr16_+_2867242 AY359034 AF058300 AB031329 AB031330	53	+	NM_145252 AY359021 JN411265 BC009722 AB528168 AM392915 AM393869 EF067313 AK311810	13045	+	CU679465 AB010779 AF321182 BC009726 AY358396 NM_022119	40944	-	NM_006799|PRSS21|10942|protease, serine, 21 (testisin)##NM_144956|PRSS21|10942|protease, serine, 21 (testisin)##NM_144957|PRSS21|10942|protease, serine, 21 (testisin)##AB031331|PRSS21|10942|protease, serine, 21 (testisin)##NM_001135086|PRSS41|360226|protease, serine, 41##AF536382|PRSS33|260429|protease, serine, 33##BC062334|PRSS33|260429|protease, serine, 33##NM_152891|PRSS33|260429|protease, serine, 33##BC074999|PRSS21|10942|protease, serine, 21 (testisin)##BC075000|PRSS21|10942|protease, serine, 21 (testisin)##AY359034|PRSS21|10942|protease, serine, 21 (testisin)##AF058300|PRSS21|10942|protease, serine, 21 (testisin)##AB031329|PRSS21|10942|protease, serine, 21 (testisin)##AB031330|PRSS21|10942|protease, serine, 21 (testisin)##NM_145252|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AY359021|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##JN411265|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC009722|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM392915|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM393869|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##EF067313|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AK311810|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AB010779|PRSS22|64063|protease, serine, 22##AF321182|PRSS22|64063|protease, serine, 22##BC009726|PRSS22|64063|protease, serine, 22##AY358396|PRSS22|64063|protease, serine, 22##NM_022119|PRSS22|64063|protease, serine, 22	0.8874	CTCF.p2:12:0.887
chr17	15732314	15732495	reg1003870.p2	3.445	+	NM_178571 AK292544 AK315847 BC028414 BC047400	-96811	+	AK315062 BC015730 BC025260 AK092259 AB058777 TSC_hg19_v1_chr17_+_15603063	-129349	+	NM_001130842 NM_020652 AK296547 TSC_hg19_v1_chr17_+_15603030	-129441	+	NM_000676 X68487	115826	+	TSC_hg19_v1_chr17_+_15848443 M97759 BC025722 AB464451 DQ891714 DQ894891 CU693036 AY136748	116088	+	BC105128 BC112107 NM_017775 TSC_hg19_v1_chr17_+_15902780 AK056878	170361	+	NM_178571|TBC1D26|353149|TBC1 domain family, member 26##AK292544|TBC1D28|254272|TBC1 domain family, member 28##AK315847|TBC1D26|353149|TBC1 domain family, member 26##BC028414|TBC1D26|353149|TBC1 domain family, member 26##BC047400|TBC1D26|353149|TBC1 domain family, member 26##AK315062|ZNF286A|57335|zinc finger protein 286A##BC015730|ZNF286A|57335|zinc finger protein 286A##BC025260|ZNF286A|57335|zinc finger protein 286A##AK092259|ZNF286A|57335|zinc finger protein 286A##NM_001130842|ZNF286A|57335|zinc finger protein 286A##NM_020652|ZNF286A|57335|zinc finger protein 286A##NM_000676|ADORA2B|136|adenosine A2b receptor##X68487|ADORA2B|136|adenosine A2b receptor##M97759|ADORA2B|136|adenosine A2b receptor##BC025722|ADORA2B|136|adenosine A2b receptor##DQ891714|ADORA2B|136|adenosine A2b receptor##DQ894891|ADORA2B|136|adenosine A2b receptor##AY136748|ADORA2B|136|adenosine A2b receptor##BC105128|TTC19|54902|tetratricopeptide repeat domain 19##BC112107|TTC19|54902|tetratricopeptide repeat domain 19##NM_017775|TTC19|54902|tetratricopeptide repeat domain 19##AK056878|TTC19|54902|tetratricopeptide repeat domain 19	0.0	
chr18	56359560	56359627	reg1044937.p1	3.445	+	TSC_hg19_v1_chr18_+_56338830 AB528440 DQ892319 DQ895521	-20748	+	TSC_hg19_v1_chr18_+_56338790 AB026118	-20796	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	-20865	+	NM_018181 AF295077 BC130618 BC130620	170526	+	TSC_hg19_v1_chr18_+_56530714 AB046849	171262	+	TSC_hg19_v1_chr18_+_56531281 BC036366	171756	+	DQ892319|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##DQ895521|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AB026118|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_018181|ZNF532|55205|zinc finger protein 532##AF295077|ZNF532|55205|zinc finger protein 532##BC130618|ZNF532|55205|zinc finger protein 532##BC130620|ZNF532|55205|zinc finger protein 532##AB046849|ZNF532|55205|zinc finger protein 532##BC036366|ZNF532|55205|zinc finger protein 532	0.056186	
chr19	53898052	53898142	reg1029355.p1	3.445	+	AK295079 NM_138374 TSC_hg19_v1_chr19_+_53837011	-61086	+	NM_033341 AF420440	-103221	-	NM_001195187	-113287	+	TSC_hg19_v1_chr19_+_53898385 NM_001040185	294	+	TSC_hg19_v1_chr19_+_53898401 AK316300 BX647981 AK295840	307	+	TSC_hg19_v1_chr19_+_53898427 BC140724 BC017357	328	+	AK295079|ZNF845|91664|zinc finger protein 845##NM_138374|ZNF845|91664|zinc finger protein 845##NM_033341|BIRC8|112401|baculoviral IAP repeat containing 8##AF420440|BIRC8|112401|baculoviral IAP repeat containing 8##NM_001195187|LOC646508|646508|family with sequence similarity 90, member A1-like##NM_001040185|ZNF765|91661|zinc finger protein 765##AK316300|ZNF765|91661|zinc finger protein 765##BX647981|ZNF765|91661|zinc finger protein 765##AK295840|ZNF765|91661|zinc finger protein 765##BC140724|ZNF765|91661|zinc finger protein 765##BC017357|ZNF765|91661|zinc finger protein 765	0.0	
chr2	45876689	45876783	reg1042931.p1	3.445	+	TSC_hg19_v1_chr2_-_45838402 AK056536 NM_018079	-38329	-	TSC_hg19_v1_chr2_-_45795116 AK316222 AK301122	-81608	-	BC024033 TSC_hg19_v1_chr2_-_45236562 AF332197 NM_016932	-640186	-	AL832345 NM_005400 BC109033 BC109034 AK313842 X65293 AB385570	2338	+	TSC_hg19_v1_chr2_+_46524545 NM_001430 BC051338	647855	+	U81984 TSC_hg19_v1_chr2_+_46524905 U51626 AB384937	648239	+	AK056536|SRBD1|55133|S1 RNA binding domain 1##NM_018079|SRBD1|55133|S1 RNA binding domain 1##AK316222|SRBD1|55133|S1 RNA binding domain 1##AK301122|SRBD1|55133|S1 RNA binding domain 1##BC024033|SIX2|10736|SIX homeobox 2##AF332197|SIX2|10736|SIX homeobox 2##NM_016932|SIX2|10736|SIX homeobox 2##AL832345|PRKCE|5581|protein kinase C, epsilon##NM_005400|PRKCE|5581|protein kinase C, epsilon##BC109033|PRKCE|5581|protein kinase C, epsilon##BC109034|PRKCE|5581|protein kinase C, epsilon##AK313842|PRKCE|5581|protein kinase C, epsilon##X65293|PRKCE|5581|protein kinase C, epsilon##NM_001430|EPAS1|2034|endothelial PAS domain protein 1##BC051338|EPAS1|2034|endothelial PAS domain protein 1##U81984|EPAS1|2034|endothelial PAS domain protein 1##U51626|EPAS1|2034|endothelial PAS domain protein 1	0.019434	
chr3	143324149	143324216	reg1041483.p2	3.445	+	BC067737 TSC_hg19_v1_chr3_+_142895211	-429011	+	TSC_hg19_v1_chr3_+_142838682 NM_004267 BC042160 AK023268 BC068604 BC036930	-485531	+	NM_001080415 TSC_hg19_v1_chr3_+_142720443 BC105604 AK296440 BC016323 BC028110 AB002330 BC006474	-603752	+	AB089794 AL832304 AY254100 BC035779 AK315107 AK301816 NM_173653	243085	-	NM_173552 AK315082	366470	+	TSC_hg19_v1_chr3_+_143690915 BC037293	366808	+	NM_004267|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC042160|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##AK023268|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC068604|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##BC036930|CHST2|9435|carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2##NM_001080415|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC105604|U2SURP|23350|U2 snRNP-associated SURP domain containing##AK296440|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC016323|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC028110|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB002330|U2SURP|23350|U2 snRNP-associated SURP domain containing##BC006474|U2SURP|23350|U2 snRNP-associated SURP domain containing##AB089794|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AL832304|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AY254100|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##BC035779|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK315107|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##AK301816|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173653|SLC9A9|285195|solute carrier family 9 (sodium/hydrogen exchanger), member 9##NM_173552|C3orf58|205428|chromosome 3 open reading frame 58##AK315082|C3orf58|205428|chromosome 3 open reading frame 58##BC037293|C3orf58|205428|chromosome 3 open reading frame 58	0.0	
chr3	17088722	17088793	reg1031227.p1	3.445	+	BC036392 NM_015184	-114176	+	AB029015 NM_001144382	-162306	+	U65918 U66726 U66078 BC027595 NM_001351	-441791	-	AK310539 NM_001134381	652754	-	D86965 NM_014744	693641	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	695410	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.0	
chr6	21438878	21439059	reg1041561.p2	3.445	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-904245	+	CR749285 NM_001243076	-1034935	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-1036865	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	155404	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	227691	+	BC015850 NM_000948	858761	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.0	
chr6	88875990	88876170	reg1022743.p2	3.445	+	NM_001160226 NM_001160258 NM_001160259 NM_016083	-314	-	BC095513 AB527293 AY766182 AY995204 BC100968 BC100969 BC100970 BC100971 DQ067455 X81121 AF107262 BC074811 BC074812 NM_033181 X81120	-21044	-	BC029488 NM_030960 AF203447	-118550	+	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	797111	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	797228	-	NM_003800 TSC_hg19_v1_chr6_-_89673347	797267	-	NM_001160226|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160258|CNR1|1268|cannabinoid receptor 1 (brain)##NM_001160259|CNR1|1268|cannabinoid receptor 1 (brain)##NM_016083|CNR1|1268|cannabinoid receptor 1 (brain)##BC095513|CNR1|1268|cannabinoid receptor 1 (brain)##AY766182|CNR1|1268|cannabinoid receptor 1 (brain)##AY995204|CNR1|1268|cannabinoid receptor 1 (brain)##BC100968|CNR1|1268|cannabinoid receptor 1 (brain)##BC100969|CNR1|1268|cannabinoid receptor 1 (brain)##BC100970|CNR1|1268|cannabinoid receptor 1 (brain)##BC100971|CNR1|1268|cannabinoid receptor 1 (brain)##DQ067455|CNR1|1268|cannabinoid receptor 1 (brain)##X81121|CNR1|1268|cannabinoid receptor 1 (brain)##AF107262|CNR1|1268|cannabinoid receptor 1 (brain)##BC074811|CNR1|1268|cannabinoid receptor 1 (brain)##BC074812|CNR1|1268|cannabinoid receptor 1 (brain)##NM_033181|CNR1|1268|cannabinoid receptor 1 (brain)##X81120|CNR1|1268|cannabinoid receptor 1 (brain)##BC029488|SPACA1|81833|sperm acrosome associated 1##NM_030960|SPACA1|81833|sperm acrosome associated 1##AF203447|SPACA1|81833|sperm acrosome associated 1##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase	0.0	
chr8	129203457	129203588	reg1031852.p1	3.445	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-396739	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-455032	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-455197	+	AB042405 NM_031415	1595611	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1748393	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1748484	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.864296	CTCF.p2:-8:0.864
chr8	26429560	26429740	reg1010551.p2	3.445	+	TSC_hg19_v1_chr8_+_26371546 AK092377 NM_001197293 AB370195	-58022	+	BC047515 TSC_hg19_v1_chr8_-_26371389 BC036489 AK055325 NM_007257	-58216	-	NM_004331 TSC_hg19_v1_chr8_+_26240583 AF452712 AK300286 AL132665 BC009603 AF067396 AF079221 AF060922 AK307195 AK300727 AF536326 AB004788 AK290213 BC001559 AB527613 BT019500 BT019501 CR456701 EU831983 EU832076	-189066	+	NM_001386 TSC_hg19_v1_chr8_+_26435441 BX647115 BC067109	5751	+	TSC_hg19_v1_chr8_+_26435468 AK223557 BC056408 D78013 BC010880 AK291287	5877	+	TSC_hg19_v1_chr8_+_26435604 U17279 AB370194 AB590733 BT006944 CU691152	6030	+	AK092377|DPYSL2|1808|dihydropyrimidinase-like 2##NM_001197293|DPYSL2|1808|dihydropyrimidinase-like 2##AB370195|DPYSL2|1808|dihydropyrimidinase-like 2##BC047515|PNMA2|10687|paraneoplastic antigen MA2##BC036489|PNMA2|10687|paraneoplastic antigen MA2##AK055325|PNMA2|10687|paraneoplastic antigen MA2##NM_007257|PNMA2|10687|paraneoplastic antigen MA2##NM_004331|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF452712|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300286|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AL132665|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC009603|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF067396|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF079221|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF060922|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK307195|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK300727|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AF536326|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AB004788|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##AK290213|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BC001559|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019500|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##BT019501|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##CR456701|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU831983|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##EU832076|BNIP3L|665|BCL2/adenovirus E1B 19kDa interacting protein 3-like##NM_001386|DPYSL2|1808|dihydropyrimidinase-like 2##BX647115|DPYSL2|1808|dihydropyrimidinase-like 2##BC067109|DPYSL2|1808|dihydropyrimidinase-like 2##AK223557|DPYSL2|1808|dihydropyrimidinase-like 2##BC056408|DPYSL2|1808|dihydropyrimidinase-like 2##D78013|DPYSL2|1808|dihydropyrimidinase-like 2##AK291287|DPYSL2|1808|dihydropyrimidinase-like 2##U17279|DPYSL2|1808|dihydropyrimidinase-like 2##AB370194|DPYSL2|1808|dihydropyrimidinase-like 2	0.0	
chr8	71316585	71316674	reg1039361.p2	3.445	+	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	-603	-	BC092442 TSC_hg19_v1_chr8_-_71315599	-1082	-	TSC_hg19_v1_chr8_-_70983549 AF319458 AK022595 NM_024504	-333074	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	203893	-	TSC_hg19_v1_chr8_-_71520654 AK303411 NM_014294	204027	-	CU674436 EU831796 EU831873 TSC_hg19_v1_chr8_-_71581401 AF151841 AK222699 AK290201	264755	-	NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##BC092442|NCOA2|10499|nuclear receptor coactivator 2##AF319458|PRDM14|63978|PR domain containing 14##AK022595|PRDM14|63978|PR domain containing 14##NM_024504|PRDM14|63978|PR domain containing 14##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1##AK303411|TRAM1|23471|translocation associated membrane protein 1##NM_014294|TRAM1|23471|translocation associated membrane protein 1##EU831796|LACTB2|51110|lactamase, beta 2##EU831873|LACTB2|51110|lactamase, beta 2##AF151841|LACTB2|51110|lactamase, beta 2##AK222699|LACTB2|51110|lactamase, beta 2##AK290201|LACTB2|51110|lactamase, beta 2	0.041868	
chrX	128249263	128249355	reg1045930.p2	3.445	+	AY251532 BC014597 NM_138289	-1062949	-	NM_001122716	-2295563	+	TSC_hg19_v1_chrX_-_125686794 BC035674 NM_178470	-2562493	-	BC117447 BC143954 BC143955 AK026426 TSC_hg19_v1_chrX_-_128657421	408099	-	EU636009 TSC_hg19_v1_chrX_-_128657443	408135	-	TSC_hg19_v1_chrX_-_128657468 NM_003069 NM_139035	408153	-	AY251532|ACTRT1|139741|actin-related protein T1##BC014597|ACTRT1|139741|actin-related protein T1##NM_138289|ACTRT1|139741|actin-related protein T1##NM_001122716|CXorf64|100130613|chromosome X open reading frame 64##BC035674|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##NM_178470|DCAF12L1|139170|DDB1 and CUL4 associated factor 12-like 1##BC117447|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC143954|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##BC143955|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##AK026426|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##EU636009|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_003069|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1##NM_139035|SMARCA1|6594|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1	0.986371	CTCF.p2:-2:0.986
chr16	53133373	53133459	reg1032189.p2	3.444	+	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	-317	+	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	-44535	+	AK299202 NM_001146188	-551703	-	TSC_hg19_v1_chr16_+_53164923 DQ333316	31644	+	NM_001207030	271624	-	TSC_hg19_v1_chr16_+_53468350 NM_005611	334936	+	AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_001207030|LOC643802|643802|u3 small nucleolar ribonucleoprotein protein MPP10-like##NM_005611|RBL2|5934|retinoblastoma-like 2 (p130)	0.010421	
chr17	75497273	75497369	reg1037529.p2	3.444	+	AK056495 NM_001113495	-25997	+	AK299828 TSC_hg19_v1_chr17_+_75447450	-49932	+	TSC_hg19_v1_chr17_+_75446735 AJ312320 AK022493	-50539	+	TSC_hg19_v1_chr17_+_75543021 AK096234	45699	+	BC039479 NM_001142640 NM_018996	502961	+	TSC_hg19_v1_chr17_-_76124768 AK074065	627451	-	AK056495|SEPT9|10801|septin 9##NM_001113495|SEPT9|10801|septin 9##AK299828|SEPT9|10801|septin 9##AJ312320|SEPT9|10801|septin 9##AK022493|SEPT9|10801|septin 9##AK096234|LOC100507351|100507351|uncharacterized LOC100507351##BC039479|TNRC6C|57690|trinucleotide repeat containing 6C##NM_001142640|TNRC6C|57690|trinucleotide repeat containing 6C##NM_018996|TNRC6C|57690|trinucleotide repeat containing 6C##AK074065|TMC6|11322|transmembrane channel-like 6	0.0	
chr19	41827256	41827398	reg1026122.p1	3.444	+	TSC_hg19_v1_chr19_+_41816132 BC011577 NM_052848	-11243	+	BC129981 TSC_hg19_v1_chr19_-_41813133	-14265	-	TSC_hg19_v1_chr19_+_41798338 AL050146	-29055	+	BT007245 CU692504 TSC_hg19_v1_chr19_-_41858962 EU832132 EU832225	31662	-	TSC_hg19_v1_chr19_-_41859306 BC022242 AK291907	31962	-	TSC_hg19_v1_chr19_-_41859420 BC000125 BC001180	32071	-	BC011577|CCDC97|90324|coiled-coil domain containing 97##NM_052848|CCDC97|90324|coiled-coil domain containing 97##AL050146|HNRNPUL1|11100|heterogeneous nuclear ribonucleoprotein U-like 1##BT007245|TGFB1|7040|transforming growth factor, beta 1##EU832132|TGFB1|7040|transforming growth factor, beta 1##EU832225|TGFB1|7040|transforming growth factor, beta 1##BC022242|TGFB1|7040|transforming growth factor, beta 1##AK291907|TGFB1|7040|transforming growth factor, beta 1##BC000125|TGFB1|7040|transforming growth factor, beta 1##BC001180|TGFB1|7040|transforming growth factor, beta 1	0.568561	CTCF.p2:3:0.569
chr20	35201556	35201676	reg1039351.p2	3.444	+	TSC_hg19_v1_chr20_+_35169921 D82057 AK130879 AK097235 BC002648 AF176042 AF176043	-31693	+	TSC_hg19_v1_chr20_+_35169892 NM_006097 NM_181526	-31730	+	NM_183006 BC153874 TSC_hg19_v1_chr20_+_35090197 BC108706	-111441	+	BC039668 TSC_hg19_v1_chr20_-_35201701	75	-	TSC_hg19_v1_chr20_+_35201854 NM_001199513 NM_001199514	276	+	TSC_hg19_v1_chr20_+_35202041 AK313919 NM_021809 AB042646 BC006549 BC012816 AK074802	385	+	D82057|MYL9|10398|myosin, light chain 9, regulatory##AK130879|MYL9|10398|myosin, light chain 9, regulatory##AK097235|MYL9|10398|myosin, light chain 9, regulatory##BC002648|MYL9|10398|myosin, light chain 9, regulatory##AF176042|MYL9|10398|myosin, light chain 9, regulatory##AF176043|MYL9|10398|myosin, light chain 9, regulatory##NM_006097|MYL9|10398|myosin, light chain 9, regulatory##NM_181526|MYL9|10398|myosin, light chain 9, regulatory##NM_183006|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC153874|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##BC108706|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4##NM_001199513|TGIF2|60436|TGFB-induced factor homeobox 2##NM_001199514|TGIF2|60436|TGFB-induced factor homeobox 2##AK313919|TGIF2|60436|TGFB-induced factor homeobox 2##NM_021809|TGIF2|60436|TGFB-induced factor homeobox 2##AB042646|TGIF2|60436|TGFB-induced factor homeobox 2##BC006549|TGIF2|60436|TGFB-induced factor homeobox 2##BC012816|TGIF2|60436|TGFB-induced factor homeobox 2##AK074802|TGIF2|60436|TGFB-induced factor homeobox 2	0.0	
chr22	37544126	37544231	reg1032654.p1	3.444	+	CR456446 TSC_hg19_v1_chr22_-_37505748	-38500	-	AB587483 AJ319876 CU013044 CU013332 CU691658 AY055384 NM_153609 BC039082	-44603	-	TSC_hg19_v1_chr22_+_37447781 NM_024681 BC025403 BC031038 BC009961 AK022304	-96399	+	BC025691 TSC_hg19_v1_chr22_-_37545956 AK312860 M26062 NM_000878	1774	-	CU013002 CU013290 DQ891475 DQ894663 AB462967 AF329842 CR456451 TSC_hg19_v1_chr22_-_37584282 AK314060 BC020551 NM_031910 NM_182486	40113	-	BC042068 NM_001051 AK291165	64205	-	CR456446|TMPRSS6|164656|transmembrane protease, serine 6##AJ319876|TMPRSS6|164656|transmembrane protease, serine 6##CU013044|TMPRSS6|164656|transmembrane protease, serine 6##CU013332|TMPRSS6|164656|transmembrane protease, serine 6##AY055384|TMPRSS6|164656|transmembrane protease, serine 6##NM_153609|TMPRSS6|164656|transmembrane protease, serine 6##BC039082|TMPRSS6|164656|transmembrane protease, serine 6##NM_024681|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC025403|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC031038|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC009961|KCTD17|79734|potassium channel tetramerisation domain containing 17##AK022304|KCTD17|79734|potassium channel tetramerisation domain containing 17##BC025691|IL2RB|3560|interleukin 2 receptor, beta##AK312860|IL2RB|3560|interleukin 2 receptor, beta##M26062|IL2RB|3560|interleukin 2 receptor, beta##NM_000878|IL2RB|3560|interleukin 2 receptor, beta##CU013002|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CU013290|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ891475|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##DQ894663|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AF329842|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##CR456451|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##AK314060|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC020551|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_031910|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##NM_182486|C1QTNF6|114904|C1q and tumor necrosis factor related protein 6##BC042068|SSTR3|6753|somatostatin receptor 3##NM_001051|SSTR3|6753|somatostatin receptor 3##AK291165|SSTR3|6753|somatostatin receptor 3	0.488054	CTCF.p2:18:0.488
chr3	180050600	180050736	reg1043230.p1	3.444	+	AB032593 NM_016559 AB032592 TSC_hg19_v1_chr3_-_179754937 AK299633 AK294501 AK314283 BC036183	-295942	-	TSC_hg19_v1_chr3_+_179370901 NM_003940 U75362 BC016146 AK290338 AM393315 AM393392 AM393610 AM393780 DQ892472 DQ895684	-679773	+	TSC_hg19_v1_chr3_+_179322594 NM_001199957 NM_001199958 NM_002492 BX648034 BC005271 BC009796 AK313822 AF047181 BC093071 BC017909 CU679497	-728075	+	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	269335	+	AB075860 TSC_hg19_v1_chr3_+_180320970	270295	+	AK304270 NM_181426	346603	-	AB032593|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_016559|PEX5L|51555|peroxisomal biogenesis factor 5-like##AB032592|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK299633|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK294501|PEX5L|51555|peroxisomal biogenesis factor 5-like##AK314283|PEX5L|51555|peroxisomal biogenesis factor 5-like##BC036183|PEX5L|51555|peroxisomal biogenesis factor 5-like##NM_003940|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##U75362|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##BC016146|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AK290338|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393315|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393392|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393610|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##AM393780|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ892472|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##DQ895684|USP13|8975|ubiquitin specific peptidase 13 (isopeptidase T-3)##NM_001199957|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_001199958|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_002492|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BX648034|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC005271|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC009796|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AK313822|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##AF047181|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC093071|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##BC017909|NDUFB5|4711|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 5, 16kDa##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##AB075860|TTC14|151613|tetratricopeptide repeat domain 14##AK304270|CCDC39|339829|coiled-coil domain containing 39##NM_181426|CCDC39|339829|coiled-coil domain containing 39	0.0	
chr9	113386096	113386199	reg1005703.p2	3.444	+	TSC_hg19_v1_chr9_-_113342011 AJ619977 AY243503 AK122605 BC030816 NM_153366	-44083	-	HQ258720 AF305830 BC130549 BC130551 BC144461 BC035743 NM_001003936	-286047	-	TSC_hg19_v1_chr9_-_113018882 NM_001244938 NM_003329	-367248	-	NM_001166280 NM_001166281 NM_005592 AF006464 BC109098 BC109099 EU832778 EU832779 GQ129313	44969	+	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	414265	-	AK298590 TSC_hg19_v1_chr9_-_113801086	414886	-	AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001244938|TXN|7295|thioredoxin##NM_003329|TXN|7295|thioredoxin##NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1##AK298590|LPAR1|1902|lysophosphatidic acid receptor 1	0.0	
chr10	97889661	97889779	reg1045679.p1	3.443	+	TSC_hg19_v1_chr10_+_97889471 CR627437 NM_014803 BC011627	-224	+	TSC_hg19_v1_chr10_-_97849981 BC028619	-39731	-	TSC_hg19_v1_chr10_-_97849968 AK096469 AK091396	-39761	-	BC109045 BC109046 TSC_hg19_v1_chr10_+_97889812 AK095317 BC030967	22	+	AM180327 AM180328 AM180329 AM180330 AM180331 AM180332 AM180333 AM180334 AM180335 AM180336 AM180337 AM180338 AM180339 AM180340 AM180341 AM180342 AM180343 AM180344 AM180345 AM180346 BC018906 BC110298 AK027779 AF068180 AF068181 AK225546 NM_001114094 NM_013314	141523	-	NM_001017520 NM_004088 AB046378 AK313615 M26144 BC012920 AK223317 DQ891465 DQ894645	174448	+	CR627437|ZNF518A|9849|zinc finger protein 518A##NM_014803|ZNF518A|9849|zinc finger protein 518A##BC028619|LOC728558|728558|uncharacterized LOC728558##AK096469|LOC728558|728558|uncharacterized LOC728558##AK091396|LOC728558|728558|uncharacterized LOC728558##BC109045|ZNF518A|9849|zinc finger protein 518A##BC109046|ZNF518A|9849|zinc finger protein 518A##BC030967|ZNF518A|9849|zinc finger protein 518A##AM180327|BLNK|29760|B-cell linker##AM180328|BLNK|29760|B-cell linker##AM180329|BLNK|29760|B-cell linker##AM180330|BLNK|29760|B-cell linker##AM180331|BLNK|29760|B-cell linker##AM180332|BLNK|29760|B-cell linker##AM180333|BLNK|29760|B-cell linker##AM180334|BLNK|29760|B-cell linker##AM180335|BLNK|29760|B-cell linker##AM180336|BLNK|29760|B-cell linker##AM180337|BLNK|29760|B-cell linker##AM180338|BLNK|29760|B-cell linker##AM180339|BLNK|29760|B-cell linker##AM180340|BLNK|29760|B-cell linker##AM180341|BLNK|29760|B-cell linker##AM180342|BLNK|29760|B-cell linker##AM180343|BLNK|29760|B-cell linker##AM180344|BLNK|29760|B-cell linker##AM180345|BLNK|29760|B-cell linker##AM180346|BLNK|29760|B-cell linker##BC018906|BLNK|29760|B-cell linker##BC110298|BLNK|29760|B-cell linker##AK027779|BLNK|29760|B-cell linker##AF068180|BLNK|29760|B-cell linker##AF068181|BLNK|29760|B-cell linker##AK225546|BLNK|29760|B-cell linker##NM_001114094|BLNK|29760|B-cell linker##NM_013314|BLNK|29760|B-cell linker##NM_001017520|DNTT|1791|deoxynucleotidyltransferase, terminal##NM_004088|DNTT|1791|deoxynucleotidyltransferase, terminal##AB046378|DNTT|1791|deoxynucleotidyltransferase, terminal##AK313615|DNTT|1791|deoxynucleotidyltransferase, terminal##M26144|DNTT|1791|deoxynucleotidyltransferase, terminal##BC012920|DNTT|1791|deoxynucleotidyltransferase, terminal##AK223317|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ891465|DNTT|1791|deoxynucleotidyltransferase, terminal##DQ894645|DNTT|1791|deoxynucleotidyltransferase, terminal	0.0	
chr1	236444293	236444376	reg1038216.p2	3.443	+	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	-138458	+	TSC_hg19_v1_chr1_-_236228670 BC012501	-215594	-	TSC_hg19_v1_chr1_-_236228496 AK297234	-215836	-	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	854	-	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	982	-	AK290862 AY028913 NM_145861 BC106873 BC106874 BC114557 BC114560 BC128082	113349	+	BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##BC012501|NID1|4811|nidogen 1##AK297234|NID1|4811|nidogen 1##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK290862|EDARADD|128178|EDAR-associated death domain##AY028913|EDARADD|128178|EDAR-associated death domain##NM_145861|EDARADD|128178|EDAR-associated death domain##BC114557|EDARADD|128178|EDAR-associated death domain##BC114560|EDARADD|128178|EDAR-associated death domain##BC128082|EDARADD|128178|EDAR-associated death domain	0.0	
chr14	105337238	105337319	reg1032194.p2	3.443	+	TSC_hg19_v1_chr14_+_105331604 AB006622 NM_001112726 NM_015005	-5598	+	TSC_hg19_v1_chr14_+_105267378 BC157833 BC171822	-69836	+	TSC_hg19_v1_chr14_+_105266890 AX721091 NM_001137601	-70358	+	TSC_hg19_v1_chr14_+_105391152 AK296188	53873	+	TSC_hg19_v1_chr14_+_105391155 AK295352	53879	+	TSC_hg19_v1_chr14_+_105391174 AY358843 NM_138790	53898	+	AB006622|KIAA0284|283638|KIAA0284##NM_001112726|KIAA0284|283638|KIAA0284##NM_015005|KIAA0284|283638|KIAA0284##BC157833|ZBTB42|100128927|zinc finger and BTB domain containing 42##BC171822|ZBTB42|100128927|zinc finger and BTB domain containing 42##AX721091|ZBTB42|100128927|zinc finger and BTB domain containing 42##NM_001137601|ZBTB42|100128927|zinc finger and BTB domain containing 42##AK296188|PLD4|122618|phospholipase D family, member 4##AK295352|PLD4|122618|phospholipase D family, member 4##AY358843|PLD4|122618|phospholipase D family, member 4##NM_138790|PLD4|122618|phospholipase D family, member 4	0.993393	CTCF.p2:4:0.993
chr14	77532379	77532473	reg1038778.p1	3.443	+	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-37366	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	-37742	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-239631	+	AK124327 TSC_hg19_v1_chr14_-_77542533	10107	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	32219	+	BC117676 TSC_hg19_v1_chr14_-_77608072	75589	-	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22	0.0	
chr20	17412311	17412402	reg1004090.p1	3.443	+	TSC_hg19_v1_chr20_+_17207684 BC005815 AK294200 AK312341 J05252 AB528512 DQ892675 DQ895917	-204541	+	BC001905 TSC_hg19_v1_chr20_+_17207673	-204685	+	NM_001201529 NM_002594 TSC_hg19_v1_chr20_+_17207617	-204746	+	AF039655 Y16717 TSC_hg19_v1_chr20_-_17512006 NM_001195	99636	-	AK316247 BC041483 NM_001161705	127186	-	NM_001011546 NM_006870 TSC_hg19_v1_chr20_+_17550756 AK315994 BC009477 AK312645 BX647319 S65738 AK302338	138383	+	BC005815|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK294200|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AK312341|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##J05252|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##DQ892675|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##DQ895917|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##BC001905|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_001201529|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##NM_002594|PCSK2|5126|proprotein convertase subtilisin/kexin type 2##AF039655|BFSP1|631|beaded filament structural protein 1, filensin##Y16717|BFSP1|631|beaded filament structural protein 1, filensin##NM_001195|BFSP1|631|beaded filament structural protein 1, filensin##AK316247|BFSP1|631|beaded filament structural protein 1, filensin##BC041483|BFSP1|631|beaded filament structural protein 1, filensin##NM_001161705|BFSP1|631|beaded filament structural protein 1, filensin##NM_001011546|DSTN|11034|destrin (actin depolymerizing factor)##NM_006870|DSTN|11034|destrin (actin depolymerizing factor)##AK315994|DSTN|11034|destrin (actin depolymerizing factor)##BC009477|DSTN|11034|destrin (actin depolymerizing factor)##AK312645|DSTN|11034|destrin (actin depolymerizing factor)##BX647319|DSTN|11034|destrin (actin depolymerizing factor)##S65738|DSTN|11034|destrin (actin depolymerizing factor)##AK302338|DSTN|11034|destrin (actin depolymerizing factor)	0.0	
chr2	151405235	151405339	reg1033670.p1	3.443	+	X97758 BC012513 TSC_hg19_v1_chr2_-_151344182 AK298007 AK311312 NM_005168 AK313224	-61123	-	TSC_hg19_v1_chr2_-_150444290 NM_015702	-960980	-	TSC_hg19_v1_chr2_-_150444250 BC023995 BC010894 AK310001 AF161510 BC022859 BC000932	-961030	-	TSC_hg19_v1_chr2_-_152118378 BC136410 BC136411 AK127552 NM_198557	713046	-	TSC_hg19_v1_chr2_-_152146171 BC001268	740865	-	U32849 AK124323 TSC_hg19_v1_chr2_-_152146429 AK291548 AK298754 NM_004688	741116	-	X97758|RND3|390|Rho family GTPase 3##BC012513|RND3|390|Rho family GTPase 3##AK298007|RND3|390|Rho family GTPase 3##NM_005168|RND3|390|Rho family GTPase 3##AK313224|RND3|390|Rho family GTPase 3##NM_015702|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC023995|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC010894|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AK310001|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##AF161510|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC022859|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC000932|MMADHC|27249|methylmalonic aciduria (cobalamin deficiency) cblD type, with homocystinuria##BC136410|RBM43|375287|RNA binding motif protein 43##BC136411|RBM43|375287|RNA binding motif protein 43##AK127552|RBM43|375287|RNA binding motif protein 43##NM_198557|RBM43|375287|RNA binding motif protein 43##BC001268|NMI|9111|N-myc (and STAT) interactor##U32849|NMI|9111|N-myc (and STAT) interactor##AK124323|NMI|9111|N-myc (and STAT) interactor##AK291548|NMI|9111|N-myc (and STAT) interactor##AK298754|NMI|9111|N-myc (and STAT) interactor##NM_004688|NMI|9111|N-myc (and STAT) interactor	0.0	
chr3	17088845	17088949	reg1031227.p2	3.443	+	BC036392 NM_015184	-114316	+	AB029015 NM_001144382	-162446	+	U65918 U66726 U66078 BC027595 NM_001351	-441931	-	AK310539 NM_001134381	652614	-	D86965 NM_014744	693501	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	695270	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.0	
chr4	113120707	113120793	reg1031506.p1	3.443	+	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	-54136	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1557472	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1562581	-	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	32334	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	86251	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	97777	+	BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1	0.0	
chr4	141164835	141164974	reg1038811.p2	3.443	+	NM_018717 TSC_hg19_v1_chr4_-_141075339	-89572	-	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	-90566	-	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	-577770	+	AK027797 NM_032547	13535	+	NM_001153446 NM_001153635 BC062684 NM_001153585 NM_001153690	99701	+	NM_001153484 NM_001153552 NM_001153663 TSC_hg19_v1_chr4_+_141294715	129792	+	NM_018717|MAML3|55534|mastermind-like 3 (Drosophila)##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)##AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##AK027797|SCOC|60592|short coiled-coil protein##NM_032547|SCOC|60592|short coiled-coil protein##NM_001153446|SCOC|60592|short coiled-coil protein##NM_001153635|SCOC|60592|short coiled-coil protein##BC062684|SCOC|60592|short coiled-coil protein##NM_001153585|SCOC|60592|short coiled-coil protein##NM_001153690|SCOC|60592|short coiled-coil protein##NM_001153484|SCOC|60592|short coiled-coil protein##NM_001153552|SCOC|60592|short coiled-coil protein##NM_001153663|SCOC|60592|short coiled-coil protein	0.0	
chr5	132050532	132050642	reg1040583.p2	3.443	+	NM_000589 NM_172348	-41215	+	BC096138 BC096139 BC096140 BC096141 NM_002188 X69079 AB463799 L06801 AF043334	-56697	+	TSC_hg19_v1_chr5_+_131892670 NM_005732 BC140005 U63139 AK290597 BC108282 AF057299 AF057300 BC062603 BC073850 BC136436	-157947	+	TSC_hg19_v1_chr5_-_132073239 AB209780 BC039592 AK295089 BC020890 AK313359 BC032599 BC045542 NM_007054	22630	-	TSC_hg19_v1_chr5_+_132083137 AK131553 NM_001039780 BC132837 BC136836 BC144416 BC144417	32557	+	TSC_hg19_v1_chr5_-_132112954 BC140759 BC171779 AK057797 AF179995 AF440761 AF440762 D86957 NM_001098811 NM_001098812 NM_015146	62417	-	NM_000589|IL4|3565|interleukin 4##NM_172348|IL4|3565|interleukin 4##BC096138|IL13|3596|interleukin 13##BC096139|IL13|3596|interleukin 13##BC096140|IL13|3596|interleukin 13##BC096141|IL13|3596|interleukin 13##NM_002188|IL13|3596|interleukin 13##X69079|IL13|3596|interleukin 13##L06801|IL13|3596|interleukin 13##AF043334|IL13|3596|interleukin 13##NM_005732|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC140005|RAD50|10111|RAD50 homolog (S. cerevisiae)##U63139|RAD50|10111|RAD50 homolog (S. cerevisiae)##AK290597|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC108282|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057299|RAD50|10111|RAD50 homolog (S. cerevisiae)##AF057300|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC062603|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC073850|RAD50|10111|RAD50 homolog (S. cerevisiae)##BC136436|RAD50|10111|RAD50 homolog (S. cerevisiae)##AB209780|KIF3A|11127|kinesin family member 3A##BC039592|KIF3A|11127|kinesin family member 3A##AK295089|KIF3A|11127|kinesin family member 3A##BC020890|KIF3A|11127|kinesin family member 3A##AK313359|KIF3A|11127|kinesin family member 3A##BC032599|KIF3A|11127|kinesin family member 3A##BC045542|KIF3A|11127|kinesin family member 3A##NM_007054|KIF3A|11127|kinesin family member 3A##AK131553|CCNI2|645121|cyclin I family, member 2##NM_001039780|CCNI2|645121|cyclin I family, member 2##BC132837|CCNI2|645121|cyclin I family, member 2##BC136836|CCNI2|645121|cyclin I family, member 2##BC144416|CCNI2|645121|cyclin I family, member 2##BC144417|CCNI2|645121|cyclin I family, member 2##BC140759|SEPT8|23176|septin 8##BC171779|SEPT8|23176|septin 8##AK057797|SEPT8|23176|septin 8##AF179995|SEPT8|23176|septin 8##AF440761|SEPT8|23176|septin 8##AF440762|SEPT8|23176|septin 8##D86957|SEPT8|23176|septin 8##NM_001098811|SEPT8|23176|septin 8##NM_001098812|SEPT8|23176|septin 8##NM_015146|SEPT8|23176|septin 8	0.589935	CTCF.p2:14:0.590
chr5	173107798	173107932	reg1040217.p2	3.443	+	TSC_hg19_v1_chr5_-_173043654 BC007436 NM_001159651 NM_138369	-64192	-	TSC_hg19_v1_chr5_-_173043624 AK301982	-64237	-	BC003114 TSC_hg19_v1_chr5_-_173043602	-64268	-	TSC_hg19_v1_chr5_+_173315343 NM_030627	207513	+	NM_001144954 BC092489 BC066964 BC034971 BC047225 BC053953 BC057842	308325	+	TSC_hg19_v1_chr5_+_173472722 AK315952 AK297196 AK312359 BC002619 NM_015980 AK294383 BC018873	364846	+	BC007436|BOD1|91272|biorientation of chromosomes in cell division 1##NM_001159651|BOD1|91272|biorientation of chromosomes in cell division 1##NM_138369|BOD1|91272|biorientation of chromosomes in cell division 1##AK301982|BOD1|91272|biorientation of chromosomes in cell division 1##BC003114|BOD1|91272|biorientation of chromosomes in cell division 1##NM_030627|CPEB4|80315|cytoplasmic polyadenylation element binding protein 4##NM_001144954|C5orf47|133491|chromosome 5 open reading frame 47##BC092489|C5orf47|133491|chromosome 5 open reading frame 47##BC066964|C5orf47|133491|chromosome 5 open reading frame 47##BC034971|C5orf47|133491|chromosome 5 open reading frame 47##BC047225|C5orf47|133491|chromosome 5 open reading frame 47##BC053953|C5orf47|133491|chromosome 5 open reading frame 47##BC057842|C5orf47|133491|chromosome 5 open reading frame 47##AK315952|HMP19|51617|HMP19 protein##AK297196|HMP19|51617|HMP19 protein##AK312359|HMP19|51617|HMP19 protein##BC002619|HMP19|51617|HMP19 protein##NM_015980|HMP19|51617|HMP19 protein##AK294383|HMP19|51617|HMP19 protein##BC018873|HMP19|51617|HMP19 protein	0.0	
chr7	44812601	44812726	reg1041211.p1	3.443	+	NM_174929 BC131780 BC016968 AY426594 AF357908	-16846	+	TSC_hg19_v1_chr7_+_44788465 AK090415 NM_031449	-24172	+	TSC_hg19_v1_chr7_+_44788175 BC110435	-24481	+	TSC_hg19_v1_chr7_+_44836244 BC137057 BC137058 NM_021130	23554	+	TSC_hg19_v1_chr7_+_44836279 AK290851 BC005982 AK130101 AK293003 BC007104 BC013915 AK026569 AK297340 AK316564 BC093076 AK290085 BC005320 D28351 BC106030 BC073992 BC003026 BC000689	23624	+	Y00052 TSC_hg19_v1_chr7_+_44836309 AB464007 DQ892625 DQ895865 CU674338 AB451307 AB451438 CR456707	23653	+	NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2##NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC137057|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC137058|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##NM_021130|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK290851|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC005982|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK130101|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK293003|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC007104|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC013915|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK026569|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK297340|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK316564|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC093076|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AK290085|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC005320|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##D28351|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC106030|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC073992|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC003026|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##BC000689|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##Y00052|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##DQ892625|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##DQ895865|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AB451307|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##AB451438|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)##CR456707|PPIA|5478|peptidylprolyl isomerase A (cyclophilin A)	0.681116	CTCF.p2:-9:0.681
chr7	74234937	74235076	reg1030543.p2	3.443	+	BC002816 NM_000265 BC065731 AK127905 AK223217 AK292094 AK316341 AK316552 AB590366 CU678218 DQ893150 DQ896445 U25793	-46654	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	-162884	+	TSC_hg19_v1_chr7_+_74072046 BC070484	-162962	+	AY260739 AY312853 AY336980 BC047706 BC061590 AK225845 AY336979 BC136849 BC067859 AK291431 AY336981 BC038098 NM_173537 AK098269	32833	-	TSC_hg19_v1_chr7_-_74306679 BC002581	71669	-	TSC_hg19_v1_chr7_-_74306685 AK303473 AK307228 AK309007	71677	-	BC002816|NCF1|653361|neutrophil cytosolic factor 1##NM_000265|NCF1|653361|neutrophil cytosolic factor 1##BC065731|NCF1|653361|neutrophil cytosolic factor 1##AK127905|NCF1|653361|neutrophil cytosolic factor 1##AK223217|NCF1|653361|neutrophil cytosolic factor 1##AK292094|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316341|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316552|NCF1|653361|neutrophil cytosolic factor 1##DQ893150|NCF1|653361|neutrophil cytosolic factor 1##DQ896445|NCF1|653361|neutrophil cytosolic factor 1##U25793|NCF1|653361|neutrophil cytosolic factor 1##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##AY260739|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336980|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC047706|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC061590|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336979|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AY336981|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC038098|GTF2IRD2|84163|GTF2I repeat domain containing 2##NM_173537|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC002581|STAG3L2|442582|stromal antigen 3-like 2##AK303473|STAG3L2|442582|stromal antigen 3-like 2##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2	0.0	
chr7_gl000195_random	129334	129443	reg1037233.p1	3.443	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr8	135575410	135575493	reg1030534.p1	3.443	+	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	-991354	-	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-1265954	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-1372121	+	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	133343	-	TSC_hg19_v1_chr8_-_135725053 AB463359	149628	-	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	149823	-	BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr11	11283330	11283460	reg1039693.p2	3.442	+	TSC_hg19_v1_chr11_+_10879769 BC014360 BC036635	-403609	+	AK123233 TSC_hg19_v1_chr11_-_10879580 AK315033 BC047754 AF205600 BC017803 BC038508 NM_001143667 NM_021211	-403877	-	TSC_hg19_v1_chr11_+_10830752 AK056207	-452598	+	AK055111 BC037341 TSC_hg19_v1_chr11_-_11643550 BC060864 NM_198516	360183	-	TSC_hg19_v1_chr11_+_11863036 AK127264 NM_017944	579621	+	TSC_hg19_v1_chr11_+_11863515 AK309240 CR749502	580096	+	BC014360|LOC729013|729013|uncharacterized LOC729013##BC036635|LOC729013|729013|uncharacterized LOC729013##AK123233|ZBED5|58486|zinc finger, BED-type containing 5##AK315033|ZBED5|58486|zinc finger, BED-type containing 5##BC047754|ZBED5|58486|zinc finger, BED-type containing 5##AF205600|ZBED5|58486|zinc finger, BED-type containing 5##BC017803|ZBED5|58486|zinc finger, BED-type containing 5##BC038508|ZBED5|58486|zinc finger, BED-type containing 5##NM_001143667|ZBED5|58486|zinc finger, BED-type containing 5##NM_021211|ZBED5|58486|zinc finger, BED-type containing 5##AK055111|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC037341|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##BC060864|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##NM_198516|GALNTL4|374378|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4##AK127264|USP47|55031|ubiquitin specific peptidase 47##NM_017944|USP47|55031|ubiquitin specific peptidase 47##AK309240|USP47|55031|ubiquitin specific peptidase 47	0.0	
chr11	118051343	118051470	reg1038749.p2	3.442	+	NM_004588 TSC_hg19_v1_chr11_-_118047340	-4064	-	AF007783 BT019487 DQ892426 DQ892634 DQ895640 U87555 AY358945 BC036793 AF049498 AK308834 AK313891 TSC_hg19_v1_chr11_-_118047330	-4169	-	AY149967 AK314531 NM_001142348 NM_174934	-27825	-	AK094399 NM_153206	32667	-	AK090409 AY138965 AY358362 AY093686 AK298722 AK300851 AK301099 AJ515553 NM_001098526	44352	-	TSC_hg19_v1_chr11_-_118123036 HQ258603 AY358626 NM_198275 AK095399 AK289390 AK296951 BC031223 AK304292 AK310966 BC113586 BC143897	71644	-	NM_004588|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AF007783|SCN2B|6327|sodium channel, voltage-gated, type II, beta##BT019487|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ892426|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ892634|SCN2B|6327|sodium channel, voltage-gated, type II, beta##DQ895640|SCN2B|6327|sodium channel, voltage-gated, type II, beta##U87555|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AY358945|SCN2B|6327|sodium channel, voltage-gated, type II, beta##BC036793|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AF049498|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK308834|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AK313891|SCN2B|6327|sodium channel, voltage-gated, type II, beta##AY149967|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##AK314531|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_001142348|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_174934|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##AK094399|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##NM_153206|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK090409|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AY138965|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AY358362|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AY093686|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK298722|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK300851|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AK301099|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##AJ515553|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##NM_001098526|AMICA1|120425|adhesion molecule, interacts with CXADR antigen 1##HQ258603|MPZL3|196264|myelin protein zero-like 3##AY358626|MPZL3|196264|myelin protein zero-like 3##NM_198275|MPZL3|196264|myelin protein zero-like 3##AK095399|MPZL3|196264|myelin protein zero-like 3##AK289390|MPZL3|196264|myelin protein zero-like 3##AK296951|MPZL3|196264|myelin protein zero-like 3##BC031223|MPZL3|196264|myelin protein zero-like 3##AK304292|MPZL3|196264|myelin protein zero-like 3##AK310966|MPZL3|196264|myelin protein zero-like 3##BC113586|MPZL3|196264|myelin protein zero-like 3##BC143897|MPZL3|196264|myelin protein zero-like 3	0.043092	
chr12	125858064	125858178	reg1039680.p2	3.442	+	NM_052907	-46960	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-308053	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-308180	+	NM_001136103	2893826	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	3450322	-	BC043528 TSC_hg19_v1_chr12_+_129337985	3479863	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.0	
chr14	68938347	68938496	reg1037978.p1	3.442	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-651901	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-655122	-	AK315462 NM_152443	-769819	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	321299	-	NM_001244698 NM_004926	322209	-	NM_001244701 AB528867	324563	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr15	80270059	80270233	reg1029739.p2	3.442	+	AB464467 BT007103 CR541937 CR541962 DQ891109 DQ894290 AY234180 U27467 AL110097 BC016281 AK304026 TSC_hg19_v1_chr15_-_80263526 U29680 Y09397 NM_001114735 NM_004049	-6595	-	TSC_hg19_v1_chr15_-_80216042 AF249277	-54108	-	NM_001100880 NM_001199757	-54483	-	NM_001242911 NM_001242912 NM_001242917 NM_001242918 NM_019006 TSC_hg19_v1_chr15_+_80351970 AF061739	81796	+	TSC_hg19_v1_chr15_+_80352031 BC005283 AK312646	81883	+	TSC_hg19_v1_chr15_+_80352046 AL136598	81921	+	BT007103|BCL2A1|597|BCL2-related protein A1##CR541937|BCL2A1|597|BCL2-related protein A1##CR541962|BCL2A1|597|BCL2-related protein A1##DQ891109|BCL2A1|597|BCL2-related protein A1##DQ894290|BCL2A1|597|BCL2-related protein A1##AY234180|BCL2A1|597|BCL2-related protein A1##U27467|BCL2A1|597|BCL2-related protein A1##AL110097|BCL2A1|597|BCL2-related protein A1##BC016281|BCL2A1|597|BCL2-related protein A1##U29680|BCL2A1|597|BCL2-related protein A1##Y09397|BCL2A1|597|BCL2-related protein A1##NM_001114735|BCL2A1|597|BCL2-related protein A1##NM_004049|BCL2A1|597|BCL2-related protein A1##AF249277|ST20|400410|suppressor of tumorigenicity 20##NM_001100880|ST20|400410|suppressor of tumorigenicity 20##NM_001199757|ST20|400410|suppressor of tumorigenicity 20##NM_001242911|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242912|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242917|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242918|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_019006|ZFAND6|54469|zinc finger, AN1-type domain 6##AF061739|ZFAND6|54469|zinc finger, AN1-type domain 6##BC005283|ZFAND6|54469|zinc finger, AN1-type domain 6##AK312646|ZFAND6|54469|zinc finger, AN1-type domain 6##AL136598|ZFAND6|54469|zinc finger, AN1-type domain 6	0.0	
chr16	50228532	50228638	reg1039802.p2	3.442	+	TSC_hg19_v1_chr16_+_50186838 AK300918 NM_001040284 NM_001040285	-41750	+	TSC_hg19_v1_chr16_+_50099915 AK289949 BC018730 BC033077	-128625	+	NM_182922 TSC_hg19_v1_chr16_+_50099906 AF462442 AK000725 BC014415	-128692	+	AK093706 TSC_hg19_v1_chr16_+_50300480 BC028085	71891	+	TSC_hg19_v1_chr16_+_50308041 BC039891	79468	+	NM_001114 D25538	93238	+	AK300918|PAPD5|64282|PAP associated domain containing 5##NM_001040284|PAPD5|64282|PAP associated domain containing 5##NM_001040285|PAPD5|64282|PAP associated domain containing 5##AK289949|HEATR3|55027|HEAT repeat containing 3##BC018730|HEATR3|55027|HEAT repeat containing 3##BC033077|HEATR3|55027|HEAT repeat containing 3##NM_182922|HEATR3|55027|HEAT repeat containing 3##AF462442|HEATR3|55027|HEAT repeat containing 3##AK000725|HEATR3|55027|HEAT repeat containing 3##BC014415|HEATR3|55027|HEAT repeat containing 3##AK093706|ADCY7|113|adenylate cyclase 7##BC039891|ADCY7|113|adenylate cyclase 7##NM_001114|ADCY7|113|adenylate cyclase 7##D25538|ADCY7|113|adenylate cyclase 7	0.0	
chr17	61819353	61819427	reg1034059.p1	3.442	+	TSC_hg19_v1_chr17_-_61819199 AF308302 AK074771 AK293160 AY290821 NM_001003786 NM_001003787 NM_001003788 NM_001165969 NM_001165970 NM_153335	-143	-	BC043641 TSC_hg19_v1_chr17_-_61819160 AL832407 AK301331 AK075005	-249	-	TSC_hg19_v1_chr17_-_61777486 AK092301 AX747464 BC004400 NM_030576 AY037154	-41872	-	TSC_hg19_v1_chr17_-_61850935 BC008905 AK027844 AK027786 AK075387 AF226054 AK314328	31527	-	TSC_hg19_v1_chr17_-_61850958 AK225813 NM_020198	31630	-	TSC_hg19_v1_chr17_+_61851529 AK125169	32132	+	AF308302|STRADA|92335|STE20-related kinase adaptor alpha##AK074771|STRADA|92335|STE20-related kinase adaptor alpha##AK293160|STRADA|92335|STE20-related kinase adaptor alpha##AY290821|STRADA|92335|STE20-related kinase adaptor alpha##NM_001003786|STRADA|92335|STE20-related kinase adaptor alpha##NM_001003787|STRADA|92335|STE20-related kinase adaptor alpha##NM_001003788|STRADA|92335|STE20-related kinase adaptor alpha##NM_001165969|STRADA|92335|STE20-related kinase adaptor alpha##NM_001165970|STRADA|92335|STE20-related kinase adaptor alpha##NM_153335|STRADA|92335|STE20-related kinase adaptor alpha##BC043641|STRADA|92335|STE20-related kinase adaptor alpha##AL832407|STRADA|92335|STE20-related kinase adaptor alpha##AK301331|STRADA|92335|STE20-related kinase adaptor alpha##AK075005|STRADA|92335|STE20-related kinase adaptor alpha##AK092301|LIMD2|80774|LIM domain containing 2##BC004400|LIMD2|80774|LIM domain containing 2##NM_030576|LIMD2|80774|LIM domain containing 2##AY037154|LIMD2|80774|LIM domain containing 2##BC008905|CCDC47|57003|coiled-coil domain containing 47##AK027844|CCDC47|57003|coiled-coil domain containing 47##AK027786|CCDC47|57003|coiled-coil domain containing 47##AK075387|CCDC47|57003|coiled-coil domain containing 47##AF226054|CCDC47|57003|coiled-coil domain containing 47##AK314328|CCDC47|57003|coiled-coil domain containing 47##AK225813|CCDC47|57003|coiled-coil domain containing 47##NM_020198|CCDC47|57003|coiled-coil domain containing 47	0.0	
chr19	21203448	21203535	reg1038902.p2	3.442	+	AK290475 NM_001172671 NM_025189 TSC_hg19_v1_chr19_+_21203432 AK023721 AX721141 AY269787 BC111776	-10	+	NM_003429 BC068066 TSC_hg19_v1_chr19_+_21106090 U35376 M61866 BC008688	-97405	+	BC067843 TSC_hg19_v1_chr19_+_20959109	-244382	+	NM_182515 AL834415 TSC_hg19_v1_chr19_+_21264973 AK056006 BC022527 BC037782 BC050468 BC064985	61512	+	BX647597 TSC_hg19_v1_chr19_+_21324836 AK308127 NM_133473 AK293072 AB075849 BC065374 BC040506	121365	+	TSC_hg19_v1_chr19_-_21512183 AK128184 AK131527 NM_021269 AK095062 BX647526	308702	-	AK290475|ZNF430|80264|zinc finger protein 430##NM_001172671|ZNF430|80264|zinc finger protein 430##NM_025189|ZNF430|80264|zinc finger protein 430##AK023721|ZNF430|80264|zinc finger protein 430##AY269787|ZNF430|80264|zinc finger protein 430##BC111776|ZNF430|80264|zinc finger protein 430##NM_003429|ZNF85|7639|zinc finger protein 85##BC068066|ZNF85|7639|zinc finger protein 85##U35376|ZNF85|7639|zinc finger protein 85##M61866|ZNF85|7639|zinc finger protein 85##BC008688|ZNF85|7639|zinc finger protein 85##NM_182515|ZNF714|148206|zinc finger protein 714##AK056006|ZNF714|148206|zinc finger protein 714##BC022527|ZNF714|148206|zinc finger protein 714##BC037782|ZNF714|148206|zinc finger protein 714##BC050468|ZNF714|148206|zinc finger protein 714##BC064985|ZNF714|148206|zinc finger protein 714##BX647597|ZNF431|170959|zinc finger protein 431##AK308127|ZNF431|170959|zinc finger protein 431##NM_133473|ZNF431|170959|zinc finger protein 431##AK293072|ZNF431|170959|zinc finger protein 431##AB075849|ZNF431|170959|zinc finger protein 431##BC040506|ZNF431|170959|zinc finger protein 431##AK128184|ZNF708|7562|zinc finger protein 708##AK131527|ZNF708|7562|zinc finger protein 708##NM_021269|ZNF708|7562|zinc finger protein 708##BX647526|ZNF708|7562|zinc finger protein 708	0.0	
chr19	56578041	56578196	reg1011891.p2	3.442	+	AB527195 AY054986 AY154460 NM_153447	-67028	+	NM_176811 AB527377 AY154463	-118886	+	AB527194 AY154468 NM_176810	-134430	-	TSC_hg19_v1_chr19_-_56632629 BC037737	54496	-	TSC_hg19_v1_chr19_-_56632646 BC012495 BC077728 NM_001002836	54528	-	TSC_hg19_v1_chr19_+_56652664 NM_001253792 NM_018337 AL834130 AK223408	74487	+	AY054986|NLRP5|126206|NLR family, pyrin domain containing 5##AY154460|NLRP5|126206|NLR family, pyrin domain containing 5##NM_153447|NLRP5|126206|NLR family, pyrin domain containing 5##NM_176811|NLRP8|126205|NLR family, pyrin domain containing 8##AY154463|NLRP8|126205|NLR family, pyrin domain containing 8##AY154468|NLRP13|126204|NLR family, pyrin domain containing 13##NM_176810|NLRP13|126204|NLR family, pyrin domain containing 13##BC037737|ZNF787|126208|zinc finger protein 787##BC012495|ZNF787|126208|zinc finger protein 787##BC077728|ZNF787|126208|zinc finger protein 787##NM_001002836|ZNF787|126208|zinc finger protein 787##NM_001253792|ZNF444|55311|zinc finger protein 444##NM_018337|ZNF444|55311|zinc finger protein 444##AL834130|ZNF444|55311|zinc finger protein 444##AK223408|ZNF444|55311|zinc finger protein 444	0.0	
chr3	12525715	12525839	reg1043026.p1	3.442	+	TSC_hg19_v1_chr3_+_12392993 NM_015869 U79012 AB451337 AB451486 U63415 AJ563369	-132715	+	AB097931 AB107271 AB472042 NM_138711 TSC_hg19_v1_chr3_+_12330568 BC006811 AJ563370	-195305	+	TSC_hg19_v1_chr3_+_12329422 NM_005037 NM_138712 X90563 AK290581	-196321	+	NM_001145393 NM_001145394 AK225875 TSC_hg19_v1_chr3_+_12525957	166	+	TSC_hg19_v1_chr3_+_12525987 AK074794 AK027821 NM_001145392 NM_001145395 NM_025265 BC004178 BC004211 BC019582 AK300449 AK295508	234	+	AK291183 TSC_hg19_v1_chr3_+_12526242	459	+	NM_015869|PPARG|5468|peroxisome proliferator-activated receptor gamma##U79012|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB451337|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB451486|PPARG|5468|peroxisome proliferator-activated receptor gamma##U63415|PPARG|5468|peroxisome proliferator-activated receptor gamma##AJ563369|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB097931|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB107271|PPARG|5468|peroxisome proliferator-activated receptor gamma##AB472042|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138711|PPARG|5468|peroxisome proliferator-activated receptor gamma##BC006811|PPARG|5468|peroxisome proliferator-activated receptor gamma##AJ563370|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_005037|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_138712|PPARG|5468|peroxisome proliferator-activated receptor gamma##X90563|PPARG|5468|peroxisome proliferator-activated receptor gamma##AK290581|PPARG|5468|peroxisome proliferator-activated receptor gamma##NM_001145393|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_001145394|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK225875|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK074794|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK027821|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_001145392|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_001145395|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##NM_025265|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##BC004178|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##BC004211|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##BC019582|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK300449|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK295508|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)##AK291183|TSEN2|80746|tRNA splicing endonuclease 2 homolog (S. cerevisiae)	0.038134	
chr3	133209960	133210100	reg1035185.p1	3.442	+	NM_003571 BC113518 BC113520 HQ258421 U48224	-91172	+	TSC_hg19_v1_chr3_+_132757234 AY358381 BC000568	-452796	+	NM_001136469 NM_023943 TSC_hg19_v1_chr3_+_132757202	-452843	+	TSC_hg19_v1_chr3_+_133292443 NM_001134422 NM_017548	82446	+	TSC_hg19_v1_chr3_+_133292588 AF103803	82542	+	TSC_hg19_v1_chr3_+_133292835 BC007338	82764	+	NM_003571|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113518|BFSP2|8419|beaded filament structural protein 2, phakinin##BC113520|BFSP2|8419|beaded filament structural protein 2, phakinin##HQ258421|BFSP2|8419|beaded filament structural protein 2, phakinin##U48224|BFSP2|8419|beaded filament structural protein 2, phakinin##AY358381|TMEM108|66000|transmembrane protein 108##BC000568|TMEM108|66000|transmembrane protein 108##NM_001136469|TMEM108|66000|transmembrane protein 108##NM_023943|TMEM108|66000|transmembrane protein 108##NM_001134422|CDV3|55573|CDV3 homolog (mouse)##NM_017548|CDV3|55573|CDV3 homolog (mouse)##AF103803|CDV3|55573|CDV3 homolog (mouse)##BC007338|CDV3|55573|CDV3 homolog (mouse)	0.0	
chr7	104563683	104563863	reg1002219.p2	3.442	+	AY260763 NM_199000 BC129937 BC129938 BC129941 AK299759 AK124251	-594555	+	CU692820 DQ892274 DQ895475 TSC_hg19_v1_chr7_-_103848462 AF081459 AF049127 AF047599 BC023652 U92538 AK302122 AK313596 AK292285 AK223361 NM_002553 NM_181747	-715342	-	NM_005045 NM_173054 U79716 AK293863 TSC_hg19_v1_chr7_-_103630014	-933777	-	TSC_hg19_v1_chr7_-_104567089 BC050337	3317	-	TSC_hg19_v1_chr7_-_104653491 AK124046	89709	-	TSC_hg19_v1_chr7_-_104654062 AK094372	90301	-	AY260763|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##NM_199000|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129937|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129938|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##BC129941|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK299759|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##AK124251|LHFPL3|375612|lipoma HMGIC fusion partner-like 3##DQ892274|ORC5|5001|origin recognition complex, subunit 5##DQ895475|ORC5|5001|origin recognition complex, subunit 5##AF081459|ORC5|5001|origin recognition complex, subunit 5##AF049127|ORC5|5001|origin recognition complex, subunit 5##AF047599|ORC5|5001|origin recognition complex, subunit 5##BC023652|ORC5|5001|origin recognition complex, subunit 5##U92538|ORC5|5001|origin recognition complex, subunit 5##AK302122|ORC5|5001|origin recognition complex, subunit 5##AK313596|ORC5|5001|origin recognition complex, subunit 5##AK292285|ORC5|5001|origin recognition complex, subunit 5##AK223361|ORC5|5001|origin recognition complex, subunit 5##NM_002553|ORC5|5001|origin recognition complex, subunit 5##NM_181747|ORC5|5001|origin recognition complex, subunit 5##NM_005045|RELN|5649|reelin##NM_173054|RELN|5649|reelin##U79716|RELN|5649|reelin##AK293863|RELN|5649|reelin##BC050337|LOC723809|723809|uncharacterized LOC723809##AK124046|LOC100216545|100216545|uncharacterized LOC100216545##AK094372|LOC100216545|100216545|uncharacterized LOC100216545	0.0	
chrX	148156116	148156280	reg1039524.p2	3.442	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-355586	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-574010	+	BC034320 NM_152578 AY211917 AK098602	-1093343	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	430576	-	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	466232	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	466396	+	AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A	0.0	
chr1	25015326	25015487	reg1000982.p2	3.441	+	TSC_hg19_v1_chr1_+_24969795 AF048977 BC017315	-45602	+	TSC_hg19_v1_chr1_+_24969792 AK302498	-45627	+	TSC_hg19_v1_chr1_+_24969763 BC011019 BC036187	-45668	+	NM_013943 TSC_hg19_v1_chr1_+_25071875 AL117424 AK001624 AK095959 BC012444 AF097330	56425	+	TSC_hg19_v1_chr1_+_25071937 AK315051 AK301466 AK307142	56527	+	TSC_hg19_v1_chr1_+_25071976 AF109196 AB463494 AM393644 CU680328 CR533501	56599	+	AF048977|SRRM1|10250|serine/arginine repetitive matrix 1##BC017315|SRRM1|10250|serine/arginine repetitive matrix 1##AK302498|SRRM1|10250|serine/arginine repetitive matrix 1##BC011019|SRRM1|10250|serine/arginine repetitive matrix 1##BC036187|SRRM1|10250|serine/arginine repetitive matrix 1##NM_013943|CLIC4|25932|chloride intracellular channel 4##AL117424|CLIC4|25932|chloride intracellular channel 4##AK001624|CLIC4|25932|chloride intracellular channel 4##AK095959|CLIC4|25932|chloride intracellular channel 4##BC012444|CLIC4|25932|chloride intracellular channel 4##AF097330|CLIC4|25932|chloride intracellular channel 4##AK315051|CLIC4|25932|chloride intracellular channel 4##AK301466|CLIC4|25932|chloride intracellular channel 4##AK307142|CLIC4|25932|chloride intracellular channel 4##AF109196|CLIC4|25932|chloride intracellular channel 4##AM393644|CLIC4|25932|chloride intracellular channel 4##CR533501|CLIC4|25932|chloride intracellular channel 4	0.0	
chr12	51477256	51477387	reg1045883.p2	3.441	+	BC017221 TSC_hg19_v1_chr12_-_51477184 AK313080	-135	-	NM_001243689 NM_015416 AF329277 AK301955 TSC_hg19_v1_chr12_+_51442109 AF195651 AK000639 AK304707 AK315119 AK127540 AK301898 AK225836 BC064943 AK057866 AF315598 AY259835 AY259836 CU687972	-35210	+	BC002592 AJ493662 NM_001174125	-55287	-	TSC_hg19_v1_chr12_-_51477380 AJ298133 NM_030809	55	-	TSC_hg19_v1_chr12_-_51566577 M84810 AK291264 AK308087	89246	-	TSC_hg19_v1_chr12_-_51566607 BC003634	89310	-	BC017221|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##AK313080|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##NM_001243689|LETMD1|25875|LETM1 domain containing 1##NM_015416|LETMD1|25875|LETM1 domain containing 1##AF329277|LETMD1|25875|LETM1 domain containing 1##AK301955|LETMD1|25875|LETM1 domain containing 1##AF195651|LETMD1|25875|LETM1 domain containing 1##AK000639|LETMD1|25875|LETM1 domain containing 1##AK304707|LETMD1|25875|LETM1 domain containing 1##AK315119|LETMD1|25875|LETM1 domain containing 1##AK127540|LETMD1|25875|LETM1 domain containing 1##AK301898|LETMD1|25875|LETM1 domain containing 1##AK225836|LETMD1|25875|LETM1 domain containing 1##BC064943|LETMD1|25875|LETM1 domain containing 1##AK057866|LETMD1|25875|LETM1 domain containing 1##AF315598|LETMD1|25875|LETM1 domain containing 1##AY259835|LETMD1|25875|LETM1 domain containing 1##AY259836|LETMD1|25875|LETM1 domain containing 1##BC002592|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AJ493662|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##NM_001174125|SLC11A2|4891|solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2##AJ298133|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##NM_030809|CSRNP2|81566|cysteine-serine-rich nuclear protein 2##M84810|TFCP2|7024|transcription factor CP2##AK291264|TFCP2|7024|transcription factor CP2##AK308087|TFCP2|7024|transcription factor CP2##BC003634|TFCP2|7024|transcription factor CP2	0.0	
chr13	31052086	31052188	reg1044695.p1	3.441	+	AK057120 TSC_hg19_v1_chr13_-_31040071 AK310975 AK291494 AK304506 NM_002128	-12079	-	X12597 D63874 AB208998 BC141844 AX795278 BC003378 BC066889 TSC_hg19_v1_chr13_-_31040021 BC030981 BC067732	-12144	-	AK291439 TSC_hg19_v1_chr13_-_30881558 AK315724 BC000612 NM_032116	-170568	-	CR749614 TSC_hg19_v1_chr13_-_31191650 AK122825	139490	-	NM_005800 BC038103 TSC_hg19_v1_chr13_+_31192056 BC036027 AK289826 CR627370 X59131 BC012594 AL832776	139826	+	AK314143 NM_001204406	235477	+	AK057120|HMGB1|3146|high mobility group box 1##AK310975|HMGB1|3146|high mobility group box 1##AK291494|HMGB1|3146|high mobility group box 1##AK304506|HMGB1|3146|high mobility group box 1##NM_002128|HMGB1|3146|high mobility group box 1##X12597|HMGB1|3146|high mobility group box 1##D63874|HMGB1|3146|high mobility group box 1##AB208998|HMGB1|3146|high mobility group box 1##BC141844|HMGB1|3146|high mobility group box 1##BC003378|HMGB1|3146|high mobility group box 1##BC066889|HMGB1|3146|high mobility group box 1##BC030981|HMGB1|3146|high mobility group box 1##BC067732|HMGB1|3146|high mobility group box 1##AK291439|KATNAL1|84056|katanin p60 subunit A-like 1##AK315724|KATNAL1|84056|katanin p60 subunit A-like 1##BC000612|KATNAL1|84056|katanin p60 subunit A-like 1##NM_032116|KATNAL1|84056|katanin p60 subunit A-like 1##CR749614|HMGB1|3146|high mobility group box 1##AK122825|HMGB1|3146|high mobility group box 1##NM_005800|USPL1|10208|ubiquitin specific peptidase like 1##BC038103|USPL1|10208|ubiquitin specific peptidase like 1##BC036027|USPL1|10208|ubiquitin specific peptidase like 1##AK289826|USPL1|10208|ubiquitin specific peptidase like 1##CR627370|USPL1|10208|ubiquitin specific peptidase like 1##X59131|USPL1|10208|ubiquitin specific peptidase like 1##BC012594|USPL1|10208|ubiquitin specific peptidase like 1##AL832776|USPL1|10208|ubiquitin specific peptidase like 1##AK314143|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein##NM_001204406|ALOX5AP|241|arachidonate 5-lipoxygenase-activating protein	0.0	
chr14	75372336	75372402	reg1016976.p1	3.441	+	TSC_hg19_v1_chr14_+_75348624 NM_001244883 NM_001933 AK289414 BX248276 AK299505 AK316463 AK300396 BC000302 BC001922 BC002735 BX248764 D16373 CR456727 CU674146 L37418 BX248774	-23744	+	BC105720 BC105721 BC105927 NM_001080408 NM_001243007	-41834	-	TSC_hg19_v1_chr14_+_75283667 BC023570	-88669	+	NM_031464	16775	-	TSC_hg19_v1_chr14_-_75389964 BC036574 AK226137 AK054800	17584	-	BX248289 NM_001207012 NM_002632	50097	-	NM_001244883|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##NM_001933|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK289414|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248276|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK299505|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK316463|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##AK300396|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC000302|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC001922|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC002735|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248764|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##D16373|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##CR456727|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##L37418|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BX248774|DLST|1743|dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)##BC105720|PROX2|283571|prospero homeobox 2##BC105721|PROX2|283571|prospero homeobox 2##BC105927|PROX2|283571|prospero homeobox 2##NM_001080408|PROX2|283571|prospero homeobox 2##NM_001243007|PROX2|283571|prospero homeobox 2##BC023570|YLPM1|56252|YLP motif containing 1##NM_031464|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##BC036574|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK226137|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##AK054800|RPS6KL1|83694|ribosomal protein S6 kinase-like 1##BX248289|PGF|5228|placental growth factor##NM_001207012|PGF|5228|placental growth factor##NM_002632|PGF|5228|placental growth factor	0.0	
chr1	7514276	7514378	reg1042692.p1	3.441	+	TSC_hg19_v1_chr1_+_6845513 AB020640 BC151835 NM_001195563 NM_001242701 NM_015215 BC116457	-668836	+	TSC_hg19_v1_chr1_-_6761903 NM_018198	-752396	-	AF306695 TSC_hg19_v1_chr1_-_6761883	-752445	-	TSC_hg19_v1_chr1_+_7831355 BC005941 NM_004781 AK316558 BC007050 BC003570 U64520	317049	+	BC026102 TSC_hg19_v1_chr1_+_7844403 AK308303	330082	+	AB047686 BC146781 AL157954 NM_016831 BC144137 AK307760 AY493418 AB463163	330498	+	AB020640|CAMTA1|23261|calmodulin binding transcription activator 1##BC151835|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001195563|CAMTA1|23261|calmodulin binding transcription activator 1##NM_001242701|CAMTA1|23261|calmodulin binding transcription activator 1##NM_015215|CAMTA1|23261|calmodulin binding transcription activator 1##BC116457|CAMTA1|23261|calmodulin binding transcription activator 1##NM_018198|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##AF306695|DNAJC11|55735|DnaJ (Hsp40) homolog, subfamily C, member 11##BC005941|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##NM_004781|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##AK316558|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC007050|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC003570|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##U64520|VAMP3|9341|vesicle-associated membrane protein 3 (cellubrevin)##BC026102|PER3|8863|period homolog 3 (Drosophila)##AK308303|PER3|8863|period homolog 3 (Drosophila)##AB047686|PER3|8863|period homolog 3 (Drosophila)##BC146781|PER3|8863|period homolog 3 (Drosophila)##AL157954|PER3|8863|period homolog 3 (Drosophila)##NM_016831|PER3|8863|period homolog 3 (Drosophila)##BC144137|PER3|8863|period homolog 3 (Drosophila)##AK307760|PER3|8863|period homolog 3 (Drosophila)##AY493418|PER3|8863|period homolog 3 (Drosophila)	0.610261	CTCF.p2:-13:0.610
chr21	29391837	29391958	reg1045891.p1	3.441	+	TSC_hg19_v1_chr21_-_28339470 AK094057 NM_007038	-1052458	-	TSC_hg19_v1_chr21_-_28217729 AF207664 AK314475 BC036515 BX647388 DQ108407 NM_006988	-1174185	-	AB385453 CU690360 DQ896765 EU176454 AB037767 AF060152 AF170084 TSC_hg19_v1_chr21_-_28217667	-1174426	-	TSC_hg19_v1_chr21_-_30257688 AB590951 BC011554 AK314100 AK225515 AF139682 NM_013240 NM_182749	865766	-	BC007525 AB384515 TSC_hg19_v1_chr21_-_30365185 AF161350 AB018257 BC150284 AB621822 BC029371 BC140790 AK001915 BC031633 NM_015565	973296	-	CU676110 TSC_hg19_v1_chr21_-_30391645 AF212232 BC012546 Y19009 BC017912 AK000056 AL355727 NM_016940 AK223357	999750	-	AK094057|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##NM_007038|ADAMTS5|11096|ADAM metallopeptidase with thrombospondin type 1 motif, 5##AF207664|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AK314475|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC036515|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BX647388|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ108407|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##NM_006988|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##DQ896765|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##EU176454|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AB037767|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF060152|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##AF170084|ADAMTS1|9510|ADAM metallopeptidase with thrombospondin type 1 motif, 1##BC011554|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK314100|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AK225515|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##AF139682|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_013240|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##NM_182749|N6AMT1|29104|N-6 adenine-specific DNA methyltransferase 1 (putative)##BC007525|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF161350|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AB018257|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC150284|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC029371|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC140790|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AK001915|LTN1|26046|listerin E3 ubiquitin protein ligase 1##BC031633|LTN1|26046|listerin E3 ubiquitin protein ligase 1##NM_015565|LTN1|26046|listerin E3 ubiquitin protein ligase 1##AF212232|RWDD2B|10069|RWD domain containing 2B##BC012546|RWDD2B|10069|RWD domain containing 2B##Y19009|RWDD2B|10069|RWD domain containing 2B##BC017912|RWDD2B|10069|RWD domain containing 2B##AK000056|RWDD2B|10069|RWD domain containing 2B##AL355727|RWDD2B|10069|RWD domain containing 2B##NM_016940|RWDD2B|10069|RWD domain containing 2B##AK223357|RWDD2B|10069|RWD domain containing 2B	0.064822	
chr2	216659700	216659793	reg1036550.p1	3.441	+	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-358964	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-359226	-	AF312399 TSC_hg19_v1_chr2_-_216290008	-369774	-	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	218590	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	286798	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	286946	+	BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##AF312399|FN1|2335|fibronectin 1##AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169	0.015016	
chr22	34174038	34174105	reg1040975.p2	3.441	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-719716	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-771345	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-976319	+	AJ007583 AB011181 NM_004737 NM_133642	142299	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1288078	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1479405	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr3	57050912	57051061	reg1040154.p1	3.441	+	AB463227 AL136832 AX775923 BC054345 TSC_hg19_v1_chr3_-_56835978 BC098122 BC098272 BC099715 BC104723 AF249744 AK308178 AK225688 AK291412 BC068513 BC094748 NM_019555	-215075	-	AK293864 AB209661 NM_001128616	-241317	-	BC070096 NM_001112736 TSC_hg19_v1_chr3_-_56717266 AK094486	-333779	-	AY221117 NM_181727 BC126274 BC136498	43517	+	AF433662 AK302493 NM_001128615	62327	-	AF458067 TSC_hg19_v1_chr3_-_57199347	148347	-	AL136832|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AX775923|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC054345|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098122|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC098272|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC099715|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC104723|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF249744|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK308178|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK225688|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK291412|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC068513|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC094748|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_019555|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK293864|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AB209661|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128616|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##BC070096|FAM208A|23272|family with sequence similarity 208, member A##NM_001112736|FAM208A|23272|family with sequence similarity 208, member A##AK094486|FAM208A|23272|family with sequence similarity 208, member A##AY221117|SPATA12|353324|spermatogenesis associated 12##NM_181727|SPATA12|353324|spermatogenesis associated 12##BC126274|SPATA12|353324|spermatogenesis associated 12##BC136498|SPATA12|353324|spermatogenesis associated 12##AF433662|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AK302493|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##NM_001128615|ARHGEF3|50650|Rho guanine nucleotide exchange factor (GEF) 3##AF458067|IL17RD|54756|interleukin 17 receptor D	0.0	
chr5	368851	369022	reg1035361.p1	3.441	+	AB033060 BC151852 BC152406 EU293605 NM_001242412 NM_020731	-64646	+	AK308872 TSC_hg19_v1_chr5_+_271775 BC106706 U58773 DQ891163 DQ894344 BT020072	-97131	+	TSC_hg19_v1_chr5_+_271772 BC012384 BC050597 BC110291 AK001917	-97168	+	TSC_hg19_v1_chr5_-_443213 BC014011 BC029796 NM_138464	74294	-	TSC_hg19_v1_chr5_+_443320 AK074086 GU727644 NM_007277 BC064569	74414	+	BC045808 TSC_hg19_v1_chr5_-_473152 BC086861 BC072677 BC064928 AF370427 AK023178	104176	-	AB033060|AHRR|57491|aryl-hydrocarbon receptor repressor##BC151852|AHRR|57491|aryl-hydrocarbon receptor repressor##BC152406|AHRR|57491|aryl-hydrocarbon receptor repressor##EU293605|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_001242412|AHRR|57491|aryl-hydrocarbon receptor repressor##NM_020731|AHRR|57491|aryl-hydrocarbon receptor repressor##AK308872|PDCD6|10016|programmed cell death 6##BC106706|PDCD6|10016|programmed cell death 6##U58773|PDCD6|10016|programmed cell death 6##DQ891163|PDCD6|10016|programmed cell death 6##DQ894344|PDCD6|10016|programmed cell death 6##BT020072|PDCD6|10016|programmed cell death 6##BC012384|PDCD6|10016|programmed cell death 6##BC050597|PDCD6|10016|programmed cell death 6##BC110291|PDCD6|10016|programmed cell death 6##AK001917|PDCD6|10016|programmed cell death 6##BC014011|C5orf55|116349|chromosome 5 open reading frame 55##BC029796|C5orf55|116349|chromosome 5 open reading frame 55##NM_138464|C5orf55|116349|chromosome 5 open reading frame 55##AK074086|EXOC3|11336|exocyst complex component 3##GU727644|EXOC3|11336|exocyst complex component 3##NM_007277|EXOC3|11336|exocyst complex component 3##BC064569|EXOC3|11336|exocyst complex component 3##BC045808|PP7080|25845|uncharacterized LOC25845##BC086861|PP7080|25845|uncharacterized LOC25845##BC072677|PP7080|25845|uncharacterized LOC25845##AF370427|PP7080|25845|uncharacterized LOC25845	0.026143	
chr6	138249154	138249220	reg1036456.p2	3.441	+	TSC_hg19_v1_chr6_-_138189314 AK124173	-59837	-	TSC_hg19_v1_chr6_+_138188395 AK312862 BC064689 BC098379 M59465 NM_006290 BC041790	-60650	+	BC051352 AK096362 NM_175747	-433662	-	DQ892670 EU176724 AJ251830 BC010163 AF317550 AY157578 TSC_hg19_v1_chr6_-_138428588 AK225907 AK075082 AK093516 AK314526 AX748178 AK097387 AK097958 AK074585 NM_022121	179381	-	TSC_hg19_v1_chr6_+_138483075 AB252196 NM_020340	233949	+	BC069109 NM_021635 AF189269 AF189270	290439	-	AK312862|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC064689|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##M59465|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##NM_006290|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC041790|TNFAIP3|7128|tumor necrosis factor, alpha-induced protein 3##BC051352|OLIG3|167826|oligodendrocyte transcription factor 3##AK096362|OLIG3|167826|oligodendrocyte transcription factor 3##NM_175747|OLIG3|167826|oligodendrocyte transcription factor 3##DQ892670|PERP|64065|PERP, TP53 apoptosis effector##EU176724|PERP|64065|PERP, TP53 apoptosis effector##AJ251830|PERP|64065|PERP, TP53 apoptosis effector##BC010163|PERP|64065|PERP, TP53 apoptosis effector##AF317550|PERP|64065|PERP, TP53 apoptosis effector##AY157578|PERP|64065|PERP, TP53 apoptosis effector##AK225907|PERP|64065|PERP, TP53 apoptosis effector##AK075082|PERP|64065|PERP, TP53 apoptosis effector##AK093516|PERP|64065|PERP, TP53 apoptosis effector##AK314526|PERP|64065|PERP, TP53 apoptosis effector##AK097387|PERP|64065|PERP, TP53 apoptosis effector##AK097958|PERP|64065|PERP, TP53 apoptosis effector##AK074585|PERP|64065|PERP, TP53 apoptosis effector##NM_022121|PERP|64065|PERP, TP53 apoptosis effector##AB252196|KIAA1244|57221|KIAA1244##NM_020340|KIAA1244|57221|KIAA1244##BC069109|PBOV1|59351|prostate and breast cancer overexpressed 1##NM_021635|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189269|PBOV1|59351|prostate and breast cancer overexpressed 1##AF189270|PBOV1|59351|prostate and breast cancer overexpressed 1	0.071442	
chr7	128853192	128853303	reg1015579.p1	3.441	+	BC009989 NM_005631	-24535	+	TSC_hg19_v1_chr7_-_128695181 AK225999 NM_001191028 NM_012470	-158042	-	TSC_hg19_v1_chr7_-_128695168 BC009923	-158099	-	TSC_hg19_v1_chr7_+_128864883 NM_001130720 NM_015328 BC024325 AB020635 AK129958 BC008349	11582	+	TSC_hg19_v1_chr7_+_129007981 NM_001130723	154739	+	TSC_hg19_v1_chr7_+_129008062 AK025372	154841	+	BC009989|SMO|6608|smoothened, frizzled family receptor##NM_005631|SMO|6608|smoothened, frizzled family receptor##AK225999|TNPO3|23534|transportin 3##NM_001191028|TNPO3|23534|transportin 3##NM_012470|TNPO3|23534|transportin 3##BC009923|TNPO3|23534|transportin 3##NM_001130720|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_015328|AHCYL2|23382|adenosylhomocysteinase-like 2##BC024325|AHCYL2|23382|adenosylhomocysteinase-like 2##AB020635|AHCYL2|23382|adenosylhomocysteinase-like 2##BC008349|AHCYL2|23382|adenosylhomocysteinase-like 2##NM_001130723|AHCYL2|23382|adenosylhomocysteinase-like 2##AK025372|AHCYL2|23382|adenosylhomocysteinase-like 2	0.0	
chr10	65626331	65626418	reg1041235.p1	3.440	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-345133	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-345212	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-345259	+	NM_178011 BX640611 AY358315 BC111492	3059441	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	3799022	-	AF091606 AK313882 NM_013266	3829563	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.89584	CTCF.p2:-7:0.896
chr1	172362785	172362856	reg1026710.p1	3.440	+	TSC_hg19_v1_chr1_+_171810630 NM_001136127 NM_015569 AK056279 AL136712 AB020627 AK308992 AK307806 BC064546 AB385386 AM393667 AM393846	-552117	+	TSC_hg19_v1_chr1_+_171750834 AB242174 AF132936 AL049669 AK027552 AB242175	-611982	+	TSC_hg19_v1_chr1_+_171750809 AK291740 AK027621	-612006	+	AL035295 NM_139240 BC038410	27008	+	TSC_hg19_v1_chr1_-_172413202 BC006539	50368	-	TSC_hg19_v1_chr1_-_172413207 AK308201	50387	-	NM_001136127|DNM3|26052|dynamin 3##NM_015569|DNM3|26052|dynamin 3##AK056279|DNM3|26052|dynamin 3##AL136712|DNM3|26052|dynamin 3##AB020627|DNM3|26052|dynamin 3##AK308992|DNM3|26052|dynamin 3##AK307806|DNM3|26052|dynamin 3##BC064546|DNM3|26052|dynamin 3##AM393667|DNM3|26052|dynamin 3##AM393846|DNM3|26052|dynamin 3##AB242174|METTL13|51603|methyltransferase like 13##AF132936|METTL13|51603|methyltransferase like 13##AL049669|METTL13|51603|methyltransferase like 13##AK027552|METTL13|51603|methyltransferase like 13##AB242175|METTL13|51603|methyltransferase like 13##AK291740|METTL13|51603|methyltransferase like 13##AK027621|METTL13|51603|methyltransferase like 13##AL035295|C1orf105|92346|chromosome 1 open reading frame 105##NM_139240|C1orf105|92346|chromosome 1 open reading frame 105##BC038410|C1orf105|92346|chromosome 1 open reading frame 105##BC006539|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C##AK308201|PIGC|5279|phosphatidylinositol glycan anchor biosynthesis, class C	0.013812	
chr12	102800224	102800327	reg1035951.p2	3.440	+	DQ892335 DQ895540 M57703 BC018048 NM_002674	-208695	-	NM_017915 AK302724 AK300041 BC070270 AF274940 BC030962 BC018903 AK303571 AK000648 BC014313	-286217	+	TSC_hg19_v1_chr12_-_102513850 AK296733 AK310619	-286397	-	TSC_hg19_v1_chr12_-_102872329 M37484 NM_001111284	72103	-	AB384874 BC148266 CR541861 X56773 X56774 M29644 X00173 TSC_hg19_v1_chr12_-_102874271	73940	-	TSC_hg19_v1_chr12_-_102874302 BC152321 M27544	74027	-	DQ892335|PMCH|5367|pro-melanin-concentrating hormone##DQ895540|PMCH|5367|pro-melanin-concentrating hormone##M57703|PMCH|5367|pro-melanin-concentrating hormone##BC018048|PMCH|5367|pro-melanin-concentrating hormone##NM_002674|PMCH|5367|pro-melanin-concentrating hormone##NM_017915|C12orf48|55010|chromosome 12 open reading frame 48##AK302724|C12orf48|55010|chromosome 12 open reading frame 48##AK300041|C12orf48|55010|chromosome 12 open reading frame 48##BC070270|C12orf48|55010|chromosome 12 open reading frame 48##AF274940|C12orf48|55010|chromosome 12 open reading frame 48##BC030962|C12orf48|55010|chromosome 12 open reading frame 48##BC018903|C12orf48|55010|chromosome 12 open reading frame 48##AK303571|C12orf48|55010|chromosome 12 open reading frame 48##AK000648|C12orf48|55010|chromosome 12 open reading frame 48##BC014313|C12orf48|55010|chromosome 12 open reading frame 48##AK296733|NUP37|79023|nucleoporin 37kDa##AK310619|NUP37|79023|nucleoporin 37kDa##M37484|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##NM_001111284|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##BC148266|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##CR541861|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X56773|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X56774|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M29644|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##X00173|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##BC152321|IGF1|3479|insulin-like growth factor 1 (somatomedin C)##M27544|IGF1|3479|insulin-like growth factor 1 (somatomedin C)	0.0	
chr12	53607011	53607192	reg1001691.p1	3.440	+	TSC_hg19_v1_chr12_-_53601066 AK300960	-6029	-	M68892 NM_000889 S80335 TSC_hg19_v1_chr12_-_53601036 AK298239 AK301523 AK311703	-6079	-	TSC_hg19_v1_chr12_-_53575136 AK296885	-31970	-	HQ692829 TSC_hg19_v1_chr12_-_53613945 AK316259 M32074 AK297801	6861	-	TSC_hg19_v1_chr12_-_53614137 AK301057 AK297277 NM_001042728 NM_001243732	7057	-	TSC_hg19_v1_chr12_-_53625973 BC064524 AK297023 M24857 L12060 BC072462 AK297110 AK290588 NM_000966 NM_001243730 NM_001243731	18835	-	AK300960|ITGB7|3695|integrin, beta 7##M68892|ITGB7|3695|integrin, beta 7##NM_000889|ITGB7|3695|integrin, beta 7##S80335|ITGB7|3695|integrin, beta 7##AK298239|ITGB7|3695|integrin, beta 7##AK301523|ITGB7|3695|integrin, beta 7##AK311703|ITGB7|3695|integrin, beta 7##AK296885|CSAD|51380|cysteine sulfinic acid decarboxylase##HQ692829|RARG|5916|retinoic acid receptor, gamma##AK316259|RARG|5916|retinoic acid receptor, gamma##M32074|RARG|5916|retinoic acid receptor, gamma##AK297801|RARG|5916|retinoic acid receptor, gamma##AK301057|RARG|5916|retinoic acid receptor, gamma##AK297277|RARG|5916|retinoic acid receptor, gamma##NM_001042728|RARG|5916|retinoic acid receptor, gamma##NM_001243732|RARG|5916|retinoic acid receptor, gamma##BC064524|RARG|5916|retinoic acid receptor, gamma##AK297023|RARG|5916|retinoic acid receptor, gamma##M24857|RARG|5916|retinoic acid receptor, gamma##L12060|RARG|5916|retinoic acid receptor, gamma##BC072462|RARG|5916|retinoic acid receptor, gamma##AK297110|RARG|5916|retinoic acid receptor, gamma##AK290588|RARG|5916|retinoic acid receptor, gamma##NM_000966|RARG|5916|retinoic acid receptor, gamma##NM_001243730|RARG|5916|retinoic acid receptor, gamma##NM_001243731|RARG|5916|retinoic acid receptor, gamma	0.0	
chr17	34889972	34890071	reg1027235.p1	3.440	+	NM_004773 AF400652 BC105608 BC017931 AK290858 AK310022 AB464422 AK308583 L40410 TSC_hg19_v1_chr17_+_34842662	-47454	+	BC033670 BC047739 AK225985 AK302064 BC075809 AK292344 NM_001040282	-81959	-	BC047739 AL136860 AK301823 BC071680 AK225985 AK302064 NM_001123392	-133007	-	TSC_hg19_v1_chr17_-_34890646 AK304073 BC008900 AK026518 AK299802	702	-	TSC_hg19_v1_chr17_+_34890824 BC054025	819	+	AB209035 AK293903 NM_001033580 NM_001163735 NM_025109	1262	-	NM_004773|ZNHIT3|9326|zinc finger, HIT-type containing 3##AF400652|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC105608|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC017931|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK290858|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK310022|ZNHIT3|9326|zinc finger, HIT-type containing 3##AK308583|ZNHIT3|9326|zinc finger, HIT-type containing 3##L40410|ZNHIT3|9326|zinc finger, HIT-type containing 3##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC075809|TBC1D3G|654341|TBC1 domain family, member 3G##AK292344|TBC1D3G|654341|TBC1 domain family, member 3G##NM_001040282|TBC1D3G|654341|TBC1 domain family, member 3G##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK225985|TBC1D3G|654341|TBC1 domain family, member 3G##AK302064|TBC1D3|729873|TBC1 domain family, member 3##NM_001123392|TBC1D3H|729877|TBC1 domain family, member 3H##AK304073|MYO19|80179|myosin XIX##BC008900|MYO19|80179|myosin XIX##AK026518|MYO19|80179|myosin XIX##AK299802|MYO19|80179|myosin XIX##AB209035|MYO19|80179|myosin XIX##AK293903|MYO19|80179|myosin XIX##NM_001033580|MYO19|80179|myosin XIX##NM_001163735|MYO19|80179|myosin XIX##NM_025109|MYO19|80179|myosin XIX	0.0	
chr17	36134717	36134844	reg1034397.p2	3.440	+	TSC_hg19_v1_chr17_-_36105051 HM116553 HM116554 HM116555 HM116556 AK290131 AK296633 AK298393 BC017714 X58840 NM_000458 NM_001165923	-29729	-	AB528419 BT007126 CR536572 DQ891528 EU176615 TSC_hg19_v1_chr17_-_36104898	-29894	-	TSC_hg19_v1_chr17_-_36003470 AF077033 AK001652 AK093661 AX748248 BC041785 NM_007010	-131303	-	NM_001123391 NM_032258 AK313329 AK302064 BC078140 BC071680 AK301823 AL136860 BC047739	149213	+	BC033670 BC047739 AL136860 AK301823 BC071680 BC078140 AK302064 AK313329 NM_001123391 NM_032258	213845	-	BC067792 TSC_hg19_v1_chr17_-_36413224	278457	-	HM116553|HNF1B|6928|HNF1 homeobox B##HM116554|HNF1B|6928|HNF1 homeobox B##HM116555|HNF1B|6928|HNF1 homeobox B##HM116556|HNF1B|6928|HNF1 homeobox B##AK290131|HNF1B|6928|HNF1 homeobox B##AK296633|HNF1B|6928|HNF1 homeobox B##AK298393|HNF1B|6928|HNF1 homeobox B##BC017714|HNF1B|6928|HNF1 homeobox B##X58840|HNF1B|6928|HNF1 homeobox B##NM_000458|HNF1B|6928|HNF1 homeobox B##NM_001165923|HNF1B|6928|HNF1 homeobox B##BT007126|HNF1B|6928|HNF1 homeobox B##CR536572|HNF1B|6928|HNF1 homeobox B##DQ891528|HNF1B|6928|HNF1 homeobox B##EU176615|HNF1B|6928|HNF1 homeobox B##AF077033|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK001652|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##AK093661|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##BC041785|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_007010|DDX52|11056|DEAD (Asp-Glu-Ala-Asp) box polypeptide 52##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##AK313329|TBC1D3|729873|TBC1 domain family, member 3##AK302064|TBC1D3|729873|TBC1 domain family, member 3##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##BC033670|TBC1D3C|414060|TBC1 domain family, member 3C##BC047739|TBC1D3|729873|TBC1 domain family, member 3##AK301823|TBC1D3C|414060|TBC1 domain family, member 3C##BC071680|TBC1D3C|414060|TBC1 domain family, member 3C##BC078140|TBC1D3F|84218|TBC1 domain family, member 3F##AK302064|TBC1D3|729873|TBC1 domain family, member 3##AK313329|TBC1D3|729873|TBC1 domain family, member 3##NM_001123391|TBC1D3|729873|TBC1 domain family, member 3##NM_032258|TBC1D3F|84218|TBC1 domain family, member 3F##BC067792|LOC440434|440434|aminopeptidase puromycin sensitive pseudogene	0.0	
chr17	74511636	74511817	reg1028421.p1	3.440	+	TSC_hg19_v1_chr17_-_74497506 BC016034 AK292135 NM_024599	-14267	-	AK303434 AY500247 AK292166 NM_001005498	-27828	-	NM_001088 U40347 AB593119 BC069434	-48069	+	AJ315162 AK098057 BC029798 AB057769 BC018822 NM_134268	21976	-	DQ390338 NM_001077620 BC146898 BC146904	24420	+	TSC_hg19_v1_chr17_+_74553850 AK123993 AK129904 AB073602 BC042949 AK055935 BX647993 BC100293	42153	+	BC016034|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292135|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_024599|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK303434|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AY500247|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292166|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001005498|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001088|AANAT|15|aralkylamine N-acetyltransferase##U40347|AANAT|15|aralkylamine N-acetyltransferase##AB593119|AANAT|15|aralkylamine N-acetyltransferase##BC069434|AANAT|15|aralkylamine N-acetyltransferase##AJ315162|CYGB|114757|cytoglobin##AK098057|CYGB|114757|cytoglobin##BC029798|CYGB|114757|cytoglobin##AB057769|CYGB|114757|cytoglobin##NM_134268|CYGB|114757|cytoglobin##DQ390338|PRCD|768206|progressive rod-cone degeneration##NM_001077620|PRCD|768206|progressive rod-cone degeneration##BC146898|PRCD|768206|progressive rod-cone degeneration##BC146904|PRCD|768206|progressive rod-cone degeneration##BC042949|LOC100507246|100507246|uncharacterized LOC100507246##BX647993|LOC100507246|100507246|uncharacterized LOC100507246##BC100293|LOC100507246|100507246|uncharacterized LOC100507246	0.0	
chr18	21603494	21603614	reg1041511.p2	3.440	+	TSC_hg19_v1_chr18_+_21594754 AK074875	-8798	+	TSC_hg19_v1_chr18_+_21594449 BC016833 NM_001135993 NM_001243425	-9155	+	AK091080 AX746769 NM_153211 BC121034 BC121035	-30760	+	AK296442 TSC_hg19_v1_chr18_+_21693341	89774	+	TSC_hg19_v1_chr18_+_21718937 BC011996 NM_012189 NM_138643 NM_153768 NM_153769 NM_153770 AK313243	115401	+	AK225858 AK301889 TSC_hg19_v1_chr18_+_21719025 AF088868 AF295039 AF329634 AF295038 HQ659768	115488	+	AK074875|TTC39C|125488|tetratricopeptide repeat domain 39C##BC016833|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001135993|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_001243425|TTC39C|125488|tetratricopeptide repeat domain 39C##AK091080|TTC39C|125488|tetratricopeptide repeat domain 39C##NM_153211|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121034|TTC39C|125488|tetratricopeptide repeat domain 39C##BC121035|TTC39C|125488|tetratricopeptide repeat domain 39C##AK296442|TTC39C|125488|tetratricopeptide repeat domain 39C##BC011996|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_012189|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_138643|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_153768|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_153769|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##NM_153770|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK313243|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK225858|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AK301889|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF088868|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF295039|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF329634|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated##AF295038|CABYR|26256|calcium binding tyrosine-(Y)-phosphorylation regulated	0.111727	
chr1	9053484	9053568	reg1039883.p2	3.440	+	NM_001215 AK300652 BC034350 M57892 AB102863 AB103091	-47593	+	AK309177 NM_001428	-114376	-	TSC_hg19_v1_chr1_-_8938746 AK223192 BX537400 AK309291 AK315417	-114764	-	AB527336 AY571960 NM_207420	32877	-	TSC_hg19_v1_chr1_-_9117554 AF451839 AF479408	64052	-	TSC_hg19_v1_chr1_-_9129605 DQ892291 DQ895491 CU674838 AK300091	76073	-	NM_001215|CA6|765|carbonic anhydrase VI##AK300652|CA6|765|carbonic anhydrase VI##BC034350|CA6|765|carbonic anhydrase VI##M57892|CA6|765|carbonic anhydrase VI##AB102863|CA6|765|carbonic anhydrase VI##AB103091|CA6|765|carbonic anhydrase VI##AK309177|ENO1|2023|enolase 1, (alpha)##NM_001428|ENO1|2023|enolase 1, (alpha)##AK223192|ENO1|2023|enolase 1, (alpha)##BX537400|ENO1|2023|enolase 1, (alpha)##AK309291|ENO1|2023|enolase 1, (alpha)##AK315417|ENO1|2023|enolase 1, (alpha)##AY571960|SLC2A7|155184|solute carrier family 2 (facilitated glucose transporter), member 7##NM_207420|SLC2A7|155184|solute carrier family 2 (facilitated glucose transporter), member 7##AF451839|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AF479408|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ892291|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##DQ895491|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5##AK300091|SLC2A5|6518|solute carrier family 2 (facilitated glucose/fructose transporter), member 5	0.281012	CTCF.p2:26:0.217
chr2	12256571	12256660	reg1033995.p1	3.440	+	BC030537 NM_145693 TSC_hg19_v1_chr2_+_11886757 AK290235 D80010	-369840	+	AY429107 DQ893289 EU176212 EU176513 EU176803 BC022501 Y10148 BC037776 TSC_hg19_v1_chr2_-_11810322 NM_012344	-446324	-	TSC_hg19_v1_chr2_+_11682836 AF245389 NM_033090	-573772	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	600638	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	601301	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	601782	+	BC030537|LPIN1|23175|lipin 1##NM_145693|LPIN1|23175|lipin 1##AK290235|LPIN1|23175|lipin 1##D80010|LPIN1|23175|lipin 1##AY429107|NTSR2|23620|neurotensin receptor 2##DQ893289|NTSR2|23620|neurotensin receptor 2##EU176212|NTSR2|23620|neurotensin receptor 2##EU176513|NTSR2|23620|neurotensin receptor 2##EU176803|NTSR2|23620|neurotensin receptor 2##BC022501|NTSR2|23620|neurotensin receptor 2##Y10148|NTSR2|23620|neurotensin receptor 2##BC037776|NTSR2|23620|neurotensin receptor 2##NM_012344|NTSR2|23620|neurotensin receptor 2##AF245389|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_033090|GREB1|9687|growth regulation by estrogen in breast cancer 1##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)	0.0	
chr2	190915635	190915702	reg1037933.p1	3.440	+	BC036376 TSC_hg19_v1_chr2_+_190649225 BC008410 AK295602 AK308311 BC084548 AY540751 AK297440 BC096330 BC096331 BC096332 AK316215 AK304634	-266468	+	TSC_hg19_v1_chr2_-_190649075 AK074756 NM_001128150 NM_016467	-266570	-	TSC_hg19_v1_chr2_-_190649062 AF151036 AF395704 AK313533 BC005200	-266634	-	AF019627 AB527883 EU446953 BC074757 AK291524 AF104922 NM_005259	11719	-	NM_001042521	86817	+	NM_001042520	99303	+	BC036376|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC008410|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK295602|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK308311|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC084548|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AY540751|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK297440|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096330|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096331|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##BC096332|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK316215|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK304634|PMS1|5378|PMS1 postmeiotic segregation increased 1 (S. cerevisiae)##AK074756|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_001128150|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##NM_016467|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AF151036|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AF395704|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AK313533|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##BC005200|ORMDL1|94101|ORM1-like 1 (S. cerevisiae)##AF019627|MSTN|2660|myostatin##EU446953|MSTN|2660|myostatin##BC074757|MSTN|2660|myostatin##AK291524|MSTN|2660|myostatin##AF104922|MSTN|2660|myostatin##NM_005259|MSTN|2660|myostatin##NM_001042521|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88	0.0	
chr22	38610910	38610977	reg1035009.p2	3.440	+	NM_001161573	-11917	+	BC015037 TSC_hg19_v1_chr22_+_38598094 AB025247	-12857	+	NM_001161572 NM_001161574 NM_012323 TSC_hg19_v1_chr22_+_38597996 AK002001 BC067751 AK300932 AJ010857	-12966	+	NM_001195071	57726	-	TSC_hg19_v1_chr22_-_38668943 CR749859	58002	-	TSC_hg19_v1_chr22_-_38669012 BC015489 AB097053 AK309071 AK292652 NM_001195072 NM_012264	58065	-	NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001195071|TMEM184B|25829|transmembrane protein 184B##CR749859|TMEM184B|25829|transmembrane protein 184B##BC015489|TMEM184B|25829|transmembrane protein 184B##AB097053|TMEM184B|25829|transmembrane protein 184B##AK309071|TMEM184B|25829|transmembrane protein 184B##AK292652|TMEM184B|25829|transmembrane protein 184B##NM_001195072|TMEM184B|25829|transmembrane protein 184B##NM_012264|TMEM184B|25829|transmembrane protein 184B	0.0	
chr2	71357603	71357780	reg1035813.p2	3.440	+	TSC_hg19_v1_chr2_+_71357454 AK056862 NM_005791 BC126389	-202	+	DQ891375 DQ894553 TSC_hg19_v1_chr2_-_71357360 BC020825 AF364547 NM_032601	-312	-	TSC_hg19_v1_chr2_+_71295777 BC001029 BC005371 AK001812 AK097223 AK222645 BC036843 AJ242910 AB463914 CU674506 CU675147 DQ892674 DQ895916 CR457271	-61942	+	TSC_hg19_v1_chr2_+_71357768 AK310931 BC041084 X98494	94	+	TSC_hg19_v1_chr2_-_71454205 AB032981 NM_020459	96539	-	TSC_hg19_v1_chr2_+_71503722 AK303723 AK309221 AK293938	146035	+	AK056862|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##NM_005791|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC126389|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##DQ891375|MCEE|84693|methylmalonyl CoA epimerase##DQ894553|MCEE|84693|methylmalonyl CoA epimerase##BC020825|MCEE|84693|methylmalonyl CoA epimerase##AF364547|MCEE|84693|methylmalonyl CoA epimerase##NM_032601|MCEE|84693|methylmalonyl CoA epimerase##BC001029|NAGK|55577|N-acetylglucosamine kinase##BC005371|NAGK|55577|N-acetylglucosamine kinase##AK001812|NAGK|55577|N-acetylglucosamine kinase##AK097223|NAGK|55577|N-acetylglucosamine kinase##AK222645|NAGK|55577|N-acetylglucosamine kinase##BC036843|NAGK|55577|N-acetylglucosamine kinase##AJ242910|NAGK|55577|N-acetylglucosamine kinase##DQ892674|NAGK|55577|N-acetylglucosamine kinase##DQ895916|NAGK|55577|N-acetylglucosamine kinase##CR457271|NAGK|55577|N-acetylglucosamine kinase##AK310931|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##BC041084|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##X98494|MPHOSPH10|10199|M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)##AB032981|PAIP2B|400961|poly(A) binding protein interacting protein 2B##NM_020459|PAIP2B|400961|poly(A) binding protein interacting protein 2B##AK303723|ZNF638|27332|zinc finger protein 638##AK309221|ZNF638|27332|zinc finger protein 638##AK293938|ZNF638|27332|zinc finger protein 638	0.0	
chr4	186393373	186393470	reg1042209.p1	3.440	+	BC038515 AK302815 AL833337 TSC_hg19_v1_chr4_-_186392907 AB080722 BC028419 BX641119 AK097605 NM_001145411 NM_152775	-537	-	BC127739 BC141968 BC150574 NM_001114357	-42878	+	TSC_hg19_v1_chr4_-_186347130 AK002062 AK091635 NM_018359	-46332	-	AK129863 BT007341 AB528880 CU674500 TSC_hg19_v1_chr4_-_186456662 AK222966 AF002280 AF002282 BC027870 AF039018 BC001017 AK313253 NM_001114107 NM_014476	63224	-	AK304653 TSC_hg19_v1_chr4_-_186577879 AK296461	184457	-	AK056758 NM_001145674 NM_001145675	184701	-	BC038515|CCDC110|256309|coiled-coil domain containing 110##AK302815|CCDC110|256309|coiled-coil domain containing 110##AL833337|CCDC110|256309|coiled-coil domain containing 110##AB080722|CCDC110|256309|coiled-coil domain containing 110##BC028419|CCDC110|256309|coiled-coil domain containing 110##BX641119|CCDC110|256309|coiled-coil domain containing 110##AK097605|CCDC110|256309|coiled-coil domain containing 110##NM_001145411|CCDC110|256309|coiled-coil domain containing 110##NM_152775|CCDC110|256309|coiled-coil domain containing 110##BC127739|C4orf47|441054|chromosome 4 open reading frame 47##BC141968|C4orf47|441054|chromosome 4 open reading frame 47##BC150574|C4orf47|441054|chromosome 4 open reading frame 47##NM_001114357|C4orf47|441054|chromosome 4 open reading frame 47##AK002062|UFSP2|55325|UFM1-specific peptidase 2##AK091635|UFSP2|55325|UFM1-specific peptidase 2##NM_018359|UFSP2|55325|UFM1-specific peptidase 2##AK129863|PDLIM3|27295|PDZ and LIM domain 3##BT007341|PDLIM3|27295|PDZ and LIM domain 3##AK222966|PDLIM3|27295|PDZ and LIM domain 3##AF002280|PDLIM3|27295|PDZ and LIM domain 3##AF002282|PDLIM3|27295|PDZ and LIM domain 3##BC027870|PDLIM3|27295|PDZ and LIM domain 3##AF039018|PDLIM3|27295|PDZ and LIM domain 3##BC001017|PDLIM3|27295|PDZ and LIM domain 3##AK313253|PDLIM3|27295|PDZ and LIM domain 3##NM_001114107|PDLIM3|27295|PDZ and LIM domain 3##NM_014476|PDLIM3|27295|PDZ and LIM domain 3##AK304653|SORBS2|8470|sorbin and SH3 domain containing 2##AK296461|SORBS2|8470|sorbin and SH3 domain containing 2##AK056758|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145674|SORBS2|8470|sorbin and SH3 domain containing 2##NM_001145675|SORBS2|8470|sorbin and SH3 domain containing 2	0.0	
chr4	6046719	6046846	reg1046561.p1	3.440	+	DQ206871 TSC_hg19_v1_chr4_-_5894794 NM_001014809	-152038	-	BC009987 TSC_hg19_v1_chr4_-_5891940	-154854	-	TSC_hg19_v1_chr4_-_5890302 NM_001313	-156473	-	TSC_hg19_v1_chr4_-_6202277 AK294356 AK307983 AK056126 AM412307 AM412308 AM412309 AM412310 BC026343 NM_001099433 NM_144720	155502	-	TSC_hg19_v1_chr4_+_6271578 AF084481 NM_001145853 NM_006005	224786	+	Y18064 TSC_hg19_v1_chr4_+_6271588	224812	+	DQ206871|CRMP1|1400|collapsin response mediator protein 1##NM_001014809|CRMP1|1400|collapsin response mediator protein 1##BC009987|CRMP1|1400|collapsin response mediator protein 1##NM_001313|CRMP1|1400|collapsin response mediator protein 1##AK294356|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK307983|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AK056126|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412307|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412308|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412309|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AM412310|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##BC026343|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_001099433|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##NM_144720|JAKMIP1|152789|janus kinase and microtubule interacting protein 1##AF084481|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_001145853|WFS1|7466|Wolfram syndrome 1 (wolframin)##NM_006005|WFS1|7466|Wolfram syndrome 1 (wolframin)##Y18064|WFS1|7466|Wolfram syndrome 1 (wolframin)	0.718118	CTCF.p2:-58:0.718
chr5	141017685	141017815	reg1034246.p1	3.440	+	TSC_hg19_v1_chr5_+_141016987 BC063469 BC009560	-671	+	TSC_hg19_v1_chr5_+_141016567 BC027919 AY358163	-1171	+	AK054889 NM_001130029 NM_173828 TSC_hg19_v1_chr5_+_141016548	-1213	+	AB527141 TSC_hg19_v1_chr5_-_141030964 AK000007	13205	-	TSC_hg19_v1_chr5_-_141030986 AY217346 NM_033449	13233	-	AJ310567 TSC_hg19_v1_chr5_-_141061794 AK091385 AX746950 AK290052	44022	-	BC063469|RELL2|285613|RELT-like 2##BC009560|RELL2|285613|RELT-like 2##BC027919|RELL2|285613|RELT-like 2##AY358163|RELL2|285613|RELT-like 2##AK054889|RELL2|285613|RELT-like 2##NM_001130029|RELL2|285613|RELT-like 2##NM_173828|RELL2|285613|RELT-like 2##AK000007|FCHSD1|89848|FCH and double SH3 domains 1##AY217346|FCHSD1|89848|FCH and double SH3 domains 1##NM_033449|FCHSD1|89848|FCH and double SH3 domains 1##AJ310567|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK091385|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3##AK290052|ARAP3|64411|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	0.0	
chr6	6407605	6407707	reg1038392.p1	3.440	+	TSC_hg19_v1_chr6_-_6320897 NM_000129	-86746	-	AB208852 BC027963 M14354 M14539 TSC_hg19_v1_chr6_-_6320896 AK304335 AK312735	-86771	-	BC042019 NM_016588 TSC_hg19_v1_chr6_-_6007752	-399959	-	NM_004271 BC038846 TSC_hg19_v1_chr6_+_6588949 AF057178 CU691612 AY931019	181294	+	BC039678 TSC_hg19_v1_chr6_+_6725205	317505	+	TSC_hg19_v1_chr6_+_7107801 D49835 NM_001168344	700170	+	NM_000129|F13A1|2162|coagulation factor XIII, A1 polypeptide##AB208852|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC027963|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14354|F13A1|2162|coagulation factor XIII, A1 polypeptide##M14539|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK304335|F13A1|2162|coagulation factor XIII, A1 polypeptide##AK312735|F13A1|2162|coagulation factor XIII, A1 polypeptide##BC042019|NRN1|51299|neuritin 1##NM_016588|NRN1|51299|neuritin 1##NM_004271|LY86|9450|lymphocyte antigen 86##BC038846|LY86|9450|lymphocyte antigen 86##AF057178|LY86|9450|lymphocyte antigen 86##AY931019|LY86|9450|lymphocyte antigen 86##D49835|RREB1|6239|ras responsive element binding protein 1##NM_001168344|RREB1|6239|ras responsive element binding protein 1	0.0	
chr7	72681005	72681133	reg1031906.p2	3.440	+	BC045632 TSC_hg19_v1_chr7_+_72569035 AK299175	-112038	+	BC050591 BC066297 BC056405 BC007488 TSC_hg19_v1_chr7_-_72425263 BC082753 AF416611 AF420250 AK021688 AL833016 AK292107 AK126486	-255827	-	AK292548 TSC_hg19_v1_chr7_+_72396883 AB528161 CU679111	-284195	+	TSC_hg19_v1_chr7_-_72722806 AB590182 CU675927 DQ892994 DQ896242 AF420249 AK126375 AF412028 AK001129 BC008084 AK315361 AK125667 AK298221 AK098619 NM_001168347 NM_001168348 NM_018044 NM_148956	41755	-	AK057366 AY081948 AY081949 NM_178125	61015	-	NM_001135211 AK302121 NM_003602 AK310255 BC036817 AF038847 CU691432 EU176233 EU176537 GQ129339 GQ129340	61223	+	BC045632|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##AK299175|GTF2IP1|2970|general transcription factor IIi, pseudogene 1##BC050591|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC066297|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC056405|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC007488|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##BC082753|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF416611|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AF420250|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK021688|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AL833016|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK292107|NSUN5P2|260294|NOP2/Sun domain family, member 5 pseudogene 2##AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AK292548|POM121|9883|POM121 membrane glycoprotein##DQ892994|NSUN5|55695|NOP2/Sun domain family, member 5##DQ896242|NSUN5|55695|NOP2/Sun domain family, member 5##AF420249|NSUN5|55695|NOP2/Sun domain family, member 5##AK126375|NSUN5|55695|NOP2/Sun domain family, member 5##AF412028|NSUN5|55695|NOP2/Sun domain family, member 5##AK001129|NSUN5|55695|NOP2/Sun domain family, member 5##BC008084|NSUN5|55695|NOP2/Sun domain family, member 5##AK315361|NSUN5|55695|NOP2/Sun domain family, member 5##AK125667|NSUN5|55695|NOP2/Sun domain family, member 5##AK298221|NSUN5|55695|NOP2/Sun domain family, member 5##AK098619|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168347|NSUN5|55695|NOP2/Sun domain family, member 5##NM_001168348|NSUN5|55695|NOP2/Sun domain family, member 5##NM_018044|NSUN5|55695|NOP2/Sun domain family, member 5##NM_148956|NSUN5|55695|NOP2/Sun domain family, member 5##AK057366|TRIM50|135892|tripartite motif containing 50##AY081948|TRIM50|135892|tripartite motif containing 50##AY081949|TRIM50|135892|tripartite motif containing 50##NM_178125|TRIM50|135892|tripartite motif containing 50##NM_001135211|FKBP6|8468|FK506 binding protein 6, 36kDa##AK302121|FKBP6|8468|FK506 binding protein 6, 36kDa##NM_003602|FKBP6|8468|FK506 binding protein 6, 36kDa##AK310255|FKBP6|8468|FK506 binding protein 6, 36kDa##BC036817|FKBP6|8468|FK506 binding protein 6, 36kDa##AF038847|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176233|FKBP6|8468|FK506 binding protein 6, 36kDa##EU176537|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129339|FKBP6|8468|FK506 binding protein 6, 36kDa##GQ129340|FKBP6|8468|FK506 binding protein 6, 36kDa	0.0	
chr8	110537357	110537511	reg1040042.p2	3.440	+	AY219181 NM_177531 BC093096 AK128617	-162705	+	TSC_hg19_v1_chr8_+_110346575 NM_001193557 NM_020189 AK095651 AK316560 AK000487 AK290752 BC051878 BC007870	-190841	+	AK301278 TSC_hg19_v1_chr8_-_110346317 BC000967 AK027897 BC043406 AK315006 BC031258 NM_032869 AF283301	-191063	-	TSC_hg19_v1_chr8_+_110551942 NM_198120 AK290651 BC017729	14551	+	NM_004215 BC005249 BC022506 AK308950 AB007619 AF006265 AY515724	14976	+	AK297182 TSC_hg19_v1_chr8_-_110620232	82792	-	AY219181|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##NM_177531|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##BC093096|PKHD1L1|93035|polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1##NM_001193557|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##NM_020189|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK095651|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK316560|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK000487|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK290752|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC051878|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##BC007870|ENY2|56943|enhancer of yellow 2 homolog (Drosophila)##AK301278|NUDCD1|84955|NudC domain containing 1##BC000967|NUDCD1|84955|NudC domain containing 1##AK027897|NUDCD1|84955|NudC domain containing 1##BC043406|NUDCD1|84955|NudC domain containing 1##AK315006|NUDCD1|84955|NudC domain containing 1##BC031258|NUDCD1|84955|NudC domain containing 1##NM_032869|NUDCD1|84955|NudC domain containing 1##AF283301|NUDCD1|84955|NudC domain containing 1##NM_198120|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK290651|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC017729|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##NM_004215|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC005249|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##BC022506|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK308950|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AB007619|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AF006265|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AY515724|EBAG9|9166|estrogen receptor binding site associated, antigen, 9##AK297182|SYBU|55638|syntabulin (syntaxin-interacting)	0.0	
chr9	113307143	113307273	reg1042232.p1	3.440	+	HQ258720 AF305830 BC130549 BC130551 BC144461 BC035743 NM_001003936	-207108	-	TSC_hg19_v1_chr9_-_113018882 NM_001244938 NM_003329	-288309	-	TSC_hg19_v1_chr9_-_113018817 BX647247 D28376 AK289508	-288383	-	TSC_hg19_v1_chr9_-_113342011 AJ619977 AY243503 AK122605 BC030816 NM_153366	34856	-	NM_001166280 NM_001166281 NM_005592 AF006464 BC109098 BC109099 EU832778 EU832779 GQ129313	123908	+	AK299279 TSC_hg19_v1_chr9_-_113800499 BC036034 AK022808 NM_001401 NM_057159	493204	-	HQ258720|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##AF305830|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130549|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC130551|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC144461|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##BC035743|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001003936|TXNDC8|255220|thioredoxin domain containing 8 (spermatozoa)##NM_001244938|TXN|7295|thioredoxin##NM_003329|TXN|7295|thioredoxin##BX647247|TXN|7295|thioredoxin##D28376|TXN|7295|thioredoxin##AK289508|TXN|7295|thioredoxin##AJ619977|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AY243503|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##AK122605|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##BC030816|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_153366|SVEP1|79987|sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1##NM_001166280|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_001166281|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##NM_005592|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AF006464|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109098|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##BC109099|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832778|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##EU832779|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##GQ129313|MUSK|4593|muscle, skeletal, receptor tyrosine kinase##AK299279|LPAR1|1902|lysophosphatidic acid receptor 1##BC036034|LPAR1|1902|lysophosphatidic acid receptor 1##AK022808|LPAR1|1902|lysophosphatidic acid receptor 1##NM_001401|LPAR1|1902|lysophosphatidic acid receptor 1##NM_057159|LPAR1|1902|lysophosphatidic acid receptor 1	0.0	
chrX	3734208	3734274	reg1037954.p1	3.440	+	TSC_hg19_v1_chrX_-_3631668 NM_005044	-102523	-	TSC_hg19_v1_chrX_-_3631645 X85545	-102596	-	TSC_hg19_v1_chrX_-_3631619 BC041073	-102699	-	AB033086 AF376803 AX773938 NM_020742	2411646	-	AK055471 BC034018 NM_181332	2412439	-	AF167078 AF167079 NM_016379	2718917	-	NM_005044|PRKX|5613|protein kinase, X-linked##X85545|PRKX|5613|protein kinase, X-linked##BC041073|PRKX|5613|protein kinase, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A	0.0	
chr10	105227342	105227458	reg1042889.p1	3.439	+	BC036193 BC036208 NM_001001412	-8755	-	TSC_hg19_v1_chr10_-_105212166 AK022195 NM_015916	-15237	-	AF131810 TSC_hg19_v1_chr10_-_105212068 BC000039	-15336	-	BC043367 NM_001129742	11596	-	NM_004210 U87864	26334	+	AK299620 TSC_hg19_v1_chr10_+_105344798	117367	+	BC036193|CALHM1|255022|calcium homeostasis modulator 1##BC036208|CALHM1|255022|calcium homeostasis modulator 1##NM_001001412|CALHM1|255022|calcium homeostasis modulator 1##AK022195|CALHM2|51063|calcium homeostasis modulator 2##NM_015916|CALHM2|51063|calcium homeostasis modulator 2##AF131810|CALHM2|51063|calcium homeostasis modulator 2##BC000039|CALHM2|51063|calcium homeostasis modulator 2##BC043367|CALHM3|119395|calcium homeostasis modulator 3##NM_001129742|CALHM3|119395|calcium homeostasis modulator 3##NM_004210|NEURL|9148|neuralized homolog (Drosophila)##U87864|NEURL|9148|neuralized homolog (Drosophila)##AK299620|NEURL|9148|neuralized homolog (Drosophila)	0.0	
chr11	128169431	128169510	reg1036875.p2	3.439	+	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1296165	+	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	-1298745	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	-1298810	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	222493	-	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	222664	-	BX640634 NM_001143820	287982	-	BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)	0.0	
chr1	1565736	1565867	reg1039755.p1	3.439	+	TSC_hg19_v1_chr1_+_1551275 NM_001170689 AK128167 BC035109 AK098785	-14501	+	TSC_hg19_v1_chr1_-_1551178 BC035078	-14680	-	NM_001170686 NM_001170687 NM_001170688 NM_080875 AK302757 AK128553 TSC_hg19_v1_chr1_+_1550895 BC037542 AK122751 AB074480 AB076691 AB076692 AB076693 AK122863 AK123400 BC016490 AB097000	-14945	+	AK297700 AB010962 AJ005256 NM_006983 BC025719 AB010961 AF056200	1769	+	BC054019 TSC_hg19_v1_chr1_-_1590434 BC104661 BC009375	24652	-	TSC_hg19_v1_chr1_-_1623947 CR936618 BC062371	58164	-	NM_001170689|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK128167|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC035109|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK098785|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC035078|MIB2|142678|mindbomb homolog 2 (Drosophila)##NM_001170686|MIB2|142678|mindbomb homolog 2 (Drosophila)##NM_001170687|MIB2|142678|mindbomb homolog 2 (Drosophila)##NM_001170688|MIB2|142678|mindbomb homolog 2 (Drosophila)##NM_080875|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK302757|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK128553|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC037542|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK122751|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB074480|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB076691|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB076692|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB076693|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK122863|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK123400|MIB2|142678|mindbomb homolog 2 (Drosophila)##BC016490|MIB2|142678|mindbomb homolog 2 (Drosophila)##AB097000|MIB2|142678|mindbomb homolog 2 (Drosophila)##AK297700|MMP23B|8510|matrix metallopeptidase 23B##AB010962|MMP23B|8510|matrix metallopeptidase 23B##AJ005256|MMP23B|8510|matrix metallopeptidase 23B##NM_006983|MMP23B|8510|matrix metallopeptidase 23B##BC025719|MMP23B|8510|matrix metallopeptidase 23B##AB010961|MMP23B|8510|matrix metallopeptidase 23B##AF056200|MMP23B|8510|matrix metallopeptidase 23B##BC054019|CDK11A|728642|cyclin-dependent kinase 11A##BC104661|CDK11A|728642|cyclin-dependent kinase 11A##BC009375|CDK11B|984|cyclin-dependent kinase 11B##CR936618|SLC35E2B|728661|solute carrier family 35, member E2B##BC062371|SLC35E2|9906|solute carrier family 35, member E2	0.99942	CTCF.p2:-47:0.705	CTCF.p2:-78:0.211
chr11	6084060	6084150	reg1033602.p1	3.439	+	BC136904 BC136911 NM_001001917	-35135	-	NM_001005179 BC136986	-59705	-	BC137343 NM_001005173	-75891	-	BC136879 BC136880 NM_001005181	44855	+	NM_001004052 BC136732 BC136733	107491	-	BC137225 NM_001005178	136309	+	BC136904|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1##BC136911|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1##NM_001001917|OR56A1|120796|olfactory receptor, family 56, subfamily A, member 1##NM_001005179|OR56A4|120793|olfactory receptor, family 56, subfamily A, member 4##BC136986|OR56A4|120793|olfactory receptor, family 56, subfamily A, member 4##BC137343|OR52L1|338751|olfactory receptor, family 52, subfamily L, member 1##NM_001005173|OR52L1|338751|olfactory receptor, family 52, subfamily L, member 1##BC136879|OR56B4|196335|olfactory receptor, family 56, subfamily B, member 4##BC136880|OR56B4|196335|olfactory receptor, family 56, subfamily B, member 4##NM_001005181|OR56B4|196335|olfactory receptor, family 56, subfamily B, member 4##NM_001004052|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2##BC136732|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2##BC136733|OR52B2|255725|olfactory receptor, family 52, subfamily B, member 2##BC137225|OR52W1|120787|olfactory receptor, family 52, subfamily W, member 1##NM_001005178|OR52W1|120787|olfactory receptor, family 52, subfamily W, member 1	0.228658	CTCF.p2:0:0.229
chr1	182053659	182053828	reg1010371.p1	3.439	+	BC137223 BC137224 AK128654 NM_001009992	-22946	-	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-601043	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-995878	+	TSC_hg19_v1_chr1_-_182354649 AK301600	300939	-	TSC_hg19_v1_chr1_-_182357758 BC127883	304020	-	AY486122 S70290 AB528372 DQ893278 DQ896609 EU832658 EU832735 TSC_hg19_v1_chr1_-_182357935	304160	-	BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase##AY486122|GLUL|2752|glutamate-ammonia ligase##S70290|GLUL|2752|glutamate-ammonia ligase##DQ893278|GLUL|2752|glutamate-ammonia ligase##DQ896609|GLUL|2752|glutamate-ammonia ligase##EU832658|GLUL|2752|glutamate-ammonia ligase##EU832735|GLUL|2752|glutamate-ammonia ligase	0.866039	CTCF.p2:-46:0.866
chr12	110540129	110540236	reg1039159.p1	3.439	+	AK097461 NM_207435	-34683	-	TSC_hg19_v1_chr12_-_110486328 AK021447 BC041968	-53853	-	AK302535 BC032833 TSC_hg19_v1_chr12_+_110437393 CU691256 AY364251	-102739	+	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	22039	+	TSC_hg19_v1_chr12_+_110719041 NM_001681 NM_170665	178853	+	TSC_hg19_v1_chr12_+_110719528 M23114 BC035588 M23115 CU690124	179186	+	AK097461|C12orf76|400073|chromosome 12 open reading frame 76##NM_207435|C12orf76|400073|chromosome 12 open reading frame 76##AK021447|C12orf76|400073|chromosome 12 open reading frame 76##BC041968|C12orf76|400073|chromosome 12 open reading frame 76##AK302535|ANKRD13A|88455|ankyrin repeat domain 13A##BC032833|ANKRD13A|88455|ankyrin repeat domain 13A##AY364251|ANKRD13A|88455|ankyrin repeat domain 13A##NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_001681|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_170665|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23114|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC035588|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23115|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	0.995911	CTCF.p2:1:0.996
chr12	133450561	133450665	reg1046901.p2	3.439	+	TSC_hg19_v1_chr12_-_133405429 BC142658 BC146675 NM_001172557 BC060826	-45151	-	TSC_hg19_v1_chr12_-_133405400 NM_005895	-45315	-	TSC_hg19_v1_chr12_-_133404955 D63997 AB027133	-45634	-	TSC_hg19_v1_chr12_-_133464153 AK001658 AK302785 AK304333 AF170724	13559	-	AK027687 TSC_hg19_v1_chr12_-_133464201 NM_001161344 NM_001161345 NM_001161346 NM_001161347 NM_018223	13598	-	BC020877 TSC_hg19_v1_chr12_-_133532893 AL832191 NM_183238 AK027873 AK122878 AL832623 NM_001164715	82260	-	BC142658|GOLGA3|2802|golgin A3##BC146675|GOLGA3|2802|golgin A3##NM_001172557|GOLGA3|2802|golgin A3##BC060826|GOLGA3|2802|golgin A3##NM_005895|GOLGA3|2802|golgin A3##D63997|GOLGA3|2802|golgin A3##AB027133|GOLGA3|2802|golgin A3##AK001658|CHFR|55743|checkpoint with forkhead and ring finger domains##AK302785|CHFR|55743|checkpoint with forkhead and ring finger domains##AK304333|CHFR|55743|checkpoint with forkhead and ring finger domains##AF170724|CHFR|55743|checkpoint with forkhead and ring finger domains##AK027687|CHFR|55743|checkpoint with forkhead and ring finger domains##NM_001161344|CHFR|55743|checkpoint with forkhead and ring finger domains##NM_001161345|CHFR|55743|checkpoint with forkhead and ring finger domains##NM_001161346|CHFR|55743|checkpoint with forkhead and ring finger domains##NM_001161347|CHFR|55743|checkpoint with forkhead and ring finger domains##NM_018223|CHFR|55743|checkpoint with forkhead and ring finger domains##BC020877|ZNF605|100289635|zinc finger protein 605##AL832191|ZNF605|100289635|zinc finger protein 605##NM_183238|ZNF605|100289635|zinc finger protein 605##AK027873|ZNF605|100289635|zinc finger protein 605##AK122878|ZNF605|100289635|zinc finger protein 605##AL832623|ZNF605|100289635|zinc finger protein 605##NM_001164715|ZNF605|100289635|zinc finger protein 605	0.0	
chr14	107283881	107283982	reg1039790.p1	3.439	+	DQ205161 AY392971 AF085654 X58399 X58398 BC002792 TSC_hg19_v1_chr14_-_107259820	-24211	-	U64470 DQ454477 FJ840100 FJ840102 FJ840107 FJ840109 FJ840115 FJ840132 FJ840133 FJ840138 GQ232997 GQ233011 GU552702 GU552706 AY003822 FJ840307 FJ840321 FJ873818 FJ873871 FJ873945 FJ874056 FJ874067 AJ008167 AJ008224 EU433862 EF441750 EU099166 AF158382 EU099257 S73615 DQ524168 AM183992 AM279494 AF103196 AF103174 JN110635 JN110648 JN111081 JN111091 JN111098 HM774464 HM774941 AF103141 AF103082 AY206992 DQ100858 HM775054 EF624225 EU146337 AF103152 AF035792 DQ926060 DQ926063 GU570363 X64148 AY971131 DQ926343 DQ005298 DQ100719 DQ100797 DQ100887 DQ926452 DQ926647 EF178034 EF178043 EF178061 EF178062 EF178101 EF178126 FJ385368 GU570216 GU570359 L19912 AB021537 AB067082 AF021981 AF062259 AF119797 AF119798 AF119799 AF174047 AF471558 AF471568 AF471570 AF471571 AF471572 AF471574 AF471575 AF471586 AJ239342 AJ249634 AJ271552 AJ413987 AJ556718 AJ556719 AJ579096 AJ579104 AJ579111 AJ579143 AJ579150 AJ579187 AJ579222 AJ579224 AJ579265 AJ579281 AJ579282 AY165856 AY640494 AY685265 AY846270 AY866722 AY866736 AY885179 AY885182 AY955081 D16833 D83691 DQ205147 DQ205154 DQ212501 DQ379471 DQ535288 DQ535352 DQ535385 DQ926164 DQ926202 DQ926383 DQ926387 DQ926505 DQ926524 EF178056 EF178080 EF178093 EF633802 GQ241317 GU570257 GU570360 HM152489 L43115 U07987 U76673 U76674 X91130 Z92897 Z92898 X81737 HM995769 L06101 L08084 AY392916 AY393068 AY393156 AF062248 AF174023 U24080 X81749 Z14221 L33852 Y14735 BC073771 TSC_hg19_v1_chr14_-_107219210 BX640620	-64933	-	DQ454665 DQ454651 FJ385401 EF566903 AF343369 AF103312 HM774239 GQ504915 FJ385355 FJ385420 HM774366 HM774126 AF035800 DQ322803 U00576 GU570358 DQ840855 DQ840895 AB066978 AF471548 AF471551 AJ579182 AJ579186 AJ579192 AJ579197 AJ627241 AY685264 D83683 DQ926386 DQ926404 DQ926453 EF028220 EF028222 FJ385324 X89053 X89055 Z46767 Z98689 Z98690 Z98696 Z98697 Z98713 HM995883 L06102 AF184762 AF184764 AF184765 X81754 Z14218 TSC_hg19_v1_chr14_-_107211472 AK127409	-72630	-	None	None	None	None	None	None	None	None	None	X58399|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##X58398|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##BC002792|IGHV5-78|28387|immunoglobulin heavy variable 5-78 (pseudogene)##Y14735|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)##BC073771|IGHA1|3493|immunoglobulin heavy constant alpha 1##BX640620|IGHM|3507|immunoglobulin heavy constant mu##AK127409|IGHG1|3500|immunoglobulin heavy constant gamma 1 (G1m marker)	0.291506	CTCF.p2:-11:0.292
chr15	81773246	81773363	reg1005320.p2	3.439	+	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	-106819	-	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	-156810	-	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	-184000	+	AK094145 TSC_hg19_v1_chr15_-_82336883	563579	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	565062	-	AB095929 BC111545 BC036211 TSC_hg19_v1_chr15_-_82338485	565172	-	NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3##AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)##AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)##BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)##BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)	0.079108	
chr1	58392910	58392986	reg1036172.p2	3.439	+	TSC_hg19_v1_chr1_-_57888785 AK313144	-504120	-	AB591028 HQ258464 BC130575 M16973 AK292740 AK313382 TSC_hg19_v1_chr1_-_57431689 BC020701 NM_000066 AK298425 AK316209 AK298444	-961232	-	NM_000562 TSC_hg19_v1_chr1_+_57320466 AK309596 BC020702 BC132911 BC132913 HQ258328	-1072440	+	TSC_hg19_v1_chr1_-_58716179 CR933698 AB210012	323234	-	TSC_hg19_v1_chr1_-_58716210 AK095513 NM_021080	323261	-	TSC_hg19_v1_chr1_-_59012387 AF263547 NM_145243 AB048348 BC012915 AK308847	619475	-	AK313144|DAB1|1600|disabled homolog 1 (Drosophila)##HQ258464|C8B|732|complement component 8, beta polypeptide##BC130575|C8B|732|complement component 8, beta polypeptide##M16973|C8B|732|complement component 8, beta polypeptide##AK292740|C8B|732|complement component 8, beta polypeptide##AK313382|C8B|732|complement component 8, beta polypeptide##BC020701|C8B|732|complement component 8, beta polypeptide##NM_000066|C8B|732|complement component 8, beta polypeptide##AK298425|C8B|732|complement component 8, beta polypeptide##AK316209|C8B|732|complement component 8, beta polypeptide##AK298444|C8B|732|complement component 8, beta polypeptide##NM_000562|C8A|731|complement component 8, alpha polypeptide##AK309596|C8A|731|complement component 8, alpha polypeptide##BC020702|C8A|731|complement component 8, alpha polypeptide##BC132911|C8A|731|complement component 8, alpha polypeptide##BC132913|C8A|731|complement component 8, alpha polypeptide##HQ258328|C8A|731|complement component 8, alpha polypeptide##CR933698|DAB1|1600|disabled homolog 1 (Drosophila)##AB210012|DAB1|1600|disabled homolog 1 (Drosophila)##AK095513|DAB1|1600|disabled homolog 1 (Drosophila)##NM_021080|DAB1|1600|disabled homolog 1 (Drosophila)##NM_145243|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AB048348|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##BC012915|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)##AK308847|OMA1|115209|OMA1 zinc metallopeptidase homolog (S. cerevisiae)	0.024898	
chr17	73649198	73649286	reg1044696.p1	3.439	+	BC062771 NM_001162997 AK131023	-6561	+	BC027861 NM_001162995	-19729	+	TSC_hg19_v1_chr17_+_73598147 BC033247	-51031	+	BC063440 EF560729 TSC_hg19_v1_chr17_-_73663235 BC016911 AK075084 AK304168 AB042823 AB042824 AB042825 NM_001003715 NM_001003716 NM_004259	14006	-	NM_013260 TSC_hg19_v1_chr17_+_73663441 AK095265 AK298060 BC030233 AY082382 BC007592 AF119664 BC063793 AK002202 AK310177 BC011724 AB464187 AF087869 CU675719 EU446793 BC013409 AK023157	14191	+	NM_000213 NM_001005731 X53587 TSC_hg19_v1_chr17_+_73717539	68289	+	BC062771|C17orf110|100130933|chromosome 17 open reading frame 110##NM_001162997|C17orf110|100130933|chromosome 17 open reading frame 110##AK131023|C17orf110|100130933|chromosome 17 open reading frame 110##BC027861|C17orf109|643008|chromosome 17 open reading frame 109##NM_001162995|C17orf109|643008|chromosome 17 open reading frame 109##BC033247|MYO15B|80022|myosin XVB pseudogene##BC063440|RECQL5|9400|RecQ protein-like 5##EF560729|RECQL5|9400|RecQ protein-like 5##BC016911|RECQL5|9400|RecQ protein-like 5##AK075084|RECQL5|9400|RecQ protein-like 5##AK304168|RECQL5|9400|RecQ protein-like 5##AB042823|RECQL5|9400|RecQ protein-like 5##AB042824|RECQL5|9400|RecQ protein-like 5##AB042825|RECQL5|9400|RecQ protein-like 5##NM_001003715|RECQL5|9400|RecQ protein-like 5##NM_001003716|RECQL5|9400|RecQ protein-like 5##NM_004259|RECQL5|9400|RecQ protein-like 5##NM_013260|SAP30BP|29115|SAP30 binding protein##AK095265|SAP30BP|29115|SAP30 binding protein##AK298060|SAP30BP|29115|SAP30 binding protein##BC030233|SAP30BP|29115|SAP30 binding protein##AY082382|SAP30BP|29115|SAP30 binding protein##BC007592|SAP30BP|29115|SAP30 binding protein##AF119664|SAP30BP|29115|SAP30 binding protein##BC063793|SAP30BP|29115|SAP30 binding protein##AK002202|SAP30BP|29115|SAP30 binding protein##AK310177|SAP30BP|29115|SAP30 binding protein##BC011724|SAP30BP|29115|SAP30 binding protein##AF087869|SAP30BP|29115|SAP30 binding protein##EU446793|SAP30BP|29115|SAP30 binding protein##BC013409|SAP30BP|29115|SAP30 binding protein##AK023157|SAP30BP|29115|SAP30 binding protein##NM_000213|ITGB4|3691|integrin, beta 4##NM_001005731|ITGB4|3691|integrin, beta 4##X53587|ITGB4|3691|integrin, beta 4	0.827585	CTCF.p2:-9:0.828
chr18	4237062	4237142	reg1040669.p1	3.439	+	AK294777 AK294717 NM_001242762 NM_001242763	-362375	-	AK299880 NM_001242764 TSC_hg19_v1_chr18_-_3874316	-362818	-	AB000276 U67988 AK308827 TSC_hg19_v1_chr18_-_3845355 AK294747 NM_001003809 NM_001242765 NM_001242766	-391772	-	AK304101 TSC_hg19_v1_chr18_-_4455255	218151	-	AK316099 NM_001242761 NM_004746 TSC_hg19_v1_chr18_-_4455271	218168	-	TSC_hg19_v1_chr18_-_5197257 NM_001145194	960150	-	AK294777|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294717|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242762|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242763|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK299880|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242764|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AB000276|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##U67988|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK294747|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001003809|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242765|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242766|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK304101|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##AK316099|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001242761|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_004746|DLGAP1|9229|discs, large (Drosophila) homolog-associated protein 1##NM_001145194|C18orf42|642597|chromosome 18 open reading frame 42	0.0	
chr22	35449088	35449183	reg1040166.p1	3.439	+	AJ007583 AB011181 NM_004737 NM_133642	-1132765	-	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-1994780	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-2046409	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	13014	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	204341	+	AK293694 NM_001135729	246132	+	AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4##AK293694|TOM1|10043|target of myb1 (chicken)##NM_001135729|TOM1|10043|target of myb1 (chicken)	0.032213	
chr3	13057856	13057983	reg1035402.p1	3.439	+	TSC_hg19_v1_chr3_-_13057189 BC071805	-701	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	-48811	-	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	-116311	-	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	56679	-	AB020713 TSC_hg19_v1_chr3_-_13384784	326846	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	403813	-	AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1##AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##AB020713|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa	0.0	
chr5	169760246	169760388	reg1044650.p2	3.439	+	TSC_hg19_v1_chr5_-_169724821 NM_005565	-35466	-	AK292890 TSC_hg19_v1_chr5_-_169724784 AK300000	-35519	-	TSC_hg19_v1_chr5_-_169724734 BC016618 AK310369	-35562	-	DQ148476 NM_001034838	20563	+	TSC_hg19_v1_chr5_+_169816493 AK311026	56179	+	BC025707 NM_004137 AK313979	56330	-	NM_005565|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK292890|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK300000|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##BC016618|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##AK310369|LCP2|3937|lymphocyte cytosolic protein 2 (SH2 domain containing leukocyte protein of 76kDa)##DQ148476|KCNIP1|30820|Kv channel interacting protein 1##NM_001034838|KCNIP1|30820|Kv channel interacting protein 1##BC025707|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##NM_004137|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1##AK313979|KCNMB1|3779|potassium large conductance calcium-activated channel, subfamily M, beta member 1	0.0	
chr5	93234843	93234947	reg1037630.p1	3.439	+	CU688688 EU446850 BC029532 AB527965 AK098546 NM_153216	-157643	-	AK309742 TSC_hg19_v1_chr5_-_92957232	-277684	-	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	-314227	+	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	212425	-	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	719362	-	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	719478	+	EU446850|POU5F2|134187|POU domain class 5, transcription factor 2##BC029532|POU5F2|134187|POU domain class 5, transcription factor 2##AK098546|POU5F2|134187|POU domain class 5, transcription factor 2##NM_153216|POU5F2|134187|POU domain class 5, transcription factor 2##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32	0.0	
chr6	96842775	96842884	reg1042638.p1	3.439	+	NM_006581 AK314966 TSC_hg19_v1_chr6_+_96463867 BC001879 BC036101 AB023021	-378962	+	TSC_hg19_v1_chr6_+_96025418 NM_024641 BX640869 AY048774 AY048775 BC146671 BC150199 CR936827 AK291940 BX537398	-817428	+	TSC_hg19_v1_chr6_-_96025325 BC047582	-817540	-	TSC_hg19_v1_chr6_+_96969716 NM_015323 BC015377 AK307651 BC036379 BC028608	126870	+	TSC_hg19_v1_chr6_+_96969734 AB018319 CU690338	126910	+	NM_001170807 NM_020482 AK058175 BC029490 BC021723 AK223539	167640	+	NM_006581|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AK314966|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##BC036101|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##AB023021|FUT9|10690|fucosyltransferase 9 (alpha (1,3) fucosyltransferase)##NM_024641|MANEA|79694|mannosidase, endo-alpha##BX640869|MANEA|79694|mannosidase, endo-alpha##AY048774|MANEA|79694|mannosidase, endo-alpha##AY048775|MANEA|79694|mannosidase, endo-alpha##BC146671|MANEA|79694|mannosidase, endo-alpha##BC150199|MANEA|79694|mannosidase, endo-alpha##CR936827|MANEA|79694|mannosidase, endo-alpha##AK291940|MANEA|79694|mannosidase, endo-alpha##BX537398|MANEA|79694|mannosidase, endo-alpha##NM_015323|UFL1|23376|UFM1-specific ligase 1##BC015377|UFL1|23376|UFM1-specific ligase 1##AK307651|UFL1|23376|UFM1-specific ligase 1##BC036379|UFL1|23376|UFM1-specific ligase 1##BC028608|UFL1|23376|UFM1-specific ligase 1##AB018319|UFL1|23376|UFM1-specific ligase 1##NM_001170807|FHL5|9457|four and a half LIM domains 5##NM_020482|FHL5|9457|four and a half LIM domains 5##AK058175|FHL5|9457|four and a half LIM domains 5##BC029490|FHL5|9457|four and a half LIM domains 5##BC021723|FHL5|9457|four and a half LIM domains 5##AK223539|FHL5|9457|four and a half LIM domains 5	0.195536	
chr7	22700494	22700620	reg1042617.p1	3.439	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	-160710	-	AL833195 NM_012294	-304036	-	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-715075	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	66266	+	TSC_hg19_v1_chr7_+_22767104 X04403	66561	+	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	161886	-	BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	0.790091	CTCF.p2:-12:0.747
chr7	24705254	24705323	reg1004283.p1	3.439	+	TSC_hg19_v1_chr7_+_24613169 BC023638 AF162130 BC012034 AL136836 NM_016447	-92200	+	BC029497 NM_000905 AK312156 K01911 M15789	-381445	+	AK057271 NM_001122833 NM_031414 BC047506 BC059374 BC033018 AF285599 AK292474 AK302689 AF332194 NM_032944	-955372	+	TSC_hg19_v1_chr7_-_24797042 BC099911	91749	-	TSC_hg19_v1_chr7_-_24797055 AK290775 AK314402 NM_001127453	91779	-	TSC_hg19_v1_chr7_-_24797316 BC125065 BC125066 AF073308	92051	-	BC023638|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AF162130|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC012034|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##AL136836|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##NM_016447|MPP6|51678|membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)##BC029497|NPY|4852|neuropeptide Y##NM_000905|NPY|4852|neuropeptide Y##AK312156|NPY|4852|neuropeptide Y##K01911|NPY|4852|neuropeptide Y##M15789|NPY|4852|neuropeptide Y##AK057271|STK31|56164|serine/threonine kinase 31##NM_001122833|STK31|56164|serine/threonine kinase 31##NM_031414|STK31|56164|serine/threonine kinase 31##BC047506|STK31|56164|serine/threonine kinase 31##BC059374|STK31|56164|serine/threonine kinase 31##BC033018|STK31|56164|serine/threonine kinase 31##AF285599|STK31|56164|serine/threonine kinase 31##AK292474|STK31|56164|serine/threonine kinase 31##AK302689|STK31|56164|serine/threonine kinase 31##AF332194|STK31|56164|serine/threonine kinase 31##NM_032944|STK31|56164|serine/threonine kinase 31##BC099911|DFNA5|1687|deafness, autosomal dominant 5##AK290775|DFNA5|1687|deafness, autosomal dominant 5##AK314402|DFNA5|1687|deafness, autosomal dominant 5##NM_001127453|DFNA5|1687|deafness, autosomal dominant 5##BC125065|DFNA5|1687|deafness, autosomal dominant 5##BC125066|DFNA5|1687|deafness, autosomal dominant 5##AF073308|DFNA5|1687|deafness, autosomal dominant 5	0.0	
chr7	66205242	66205422	reg1033560.p1	3.439	+	TSC_hg19_v1_chr7_+_66147121 AK056864	-58192	+	BC042482 TSC_hg19_v1_chr7_+_66093944 AK056631 AK127790	-111390	+	TSC_hg19_v1_chr7_+_66093867 NM_001167961 NM_153033	-111458	+	NM_014504 TSC_hg19_v1_chr7_+_66205645	312	+	TSC_hg19_v1_chr7_+_66205692 BC015330	362	+	TSC_hg19_v1_chr7_+_66205719 AJ250042 AK223329 AK290678	398	+	AK056864|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##BC042482|KCTD7|154881|potassium channel tetramerisation domain containing 7##AK056631|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_001167961|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_153033|KCTD7|154881|potassium channel tetramerisation domain containing 7##NM_014504|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##BC015330|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AJ250042|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK223329|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1##AK290678|RABGEF1|27342|RAB guanine nucleotide exchange factor (GEF) 1	0.0	
chr8	141709565	141709653	reg1035600.p2	3.439	+	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-63985	-	AK308709 BC015891 TSC_hg19_v1_chr8_+_141521583 AB463498 AF226076 DQ895620 EU176214	-188046	+	TSC_hg19_v1_chr8_+_141521394 NM_017444 AK023537	-188217	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	301647	-	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	429128	+	AK128212 NM_001080431	529063	-	BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK308709|CHRAC1|54108|chromatin accessibility complex 1##BC015891|CHRAC1|54108|chromatin accessibility complex 1##AF226076|CHRAC1|54108|chromatin accessibility complex 1##DQ895620|CHRAC1|54108|chromatin accessibility complex 1##EU176214|CHRAC1|54108|chromatin accessibility complex 1##NM_017444|CHRAC1|54108|chromatin accessibility complex 1##AK023537|CHRAC1|54108|chromatin accessibility complex 1##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4	0.0	
chr9	102016146	102016326	reg1031986.p1	3.439	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-31649	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-31993	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-32019	-	TSC_hg19_v1_chr9_-_102582187 AK057451	565929	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	567921	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	652691	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.0	
chr9	69479000	69479158	reg1014926.p2	3.439	+	AL136793 NM_001098805	-97099	+	AF265442 BC069006 AK293173 NM_001085457	-216525	-	NM_001085476	-276876	-	NM_001126334	699735	-	NM_001099279 NM_199244	950651	-	CU688346 TSC_hg19_v1_chr9_-_70490092	1011002	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.0	
chr10	65282067	65282174	reg1037883.p1	3.438	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	-879	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	-958	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	-1005	+	NM_178011 BX640611 AY358315 BC111492	3403695	+	AK308726 AK289756 AY198183 BC065819 NM_001127384 BC022004 BC030646	4143276	-	AF091606 AK313882 NM_013266	4173817	-	BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##NM_178011|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BX640611|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AY358315|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##BC111492|LRRTM3|347731|leucine rich repeat transmembrane neuronal 3##AK308726|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK289756|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AY198183|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC065819|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_001127384|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC022004|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##BC030646|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AF091606|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##AK313882|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3##NM_013266|CTNNA3|29119|catenin (cadherin-associated protein), alpha 3	0.0	
chr11	117882975	117883082	reg1043839.p1	3.438	+	TSC_hg19_v1_chr11_+_117857155 U00672 BC028082 AB590303 CU688390 DQ891031 DQ893720 AK316146 AB209626	-25741	+	TSC_hg19_v1_chr11_+_117857108 AK291645 AK301484 NM_001558 AK301260 AK316342 AK313049 AK301492	-25938	+	BC018715 AK300283 AB048796 AB048797 BC114928 AY190317 AK027798 TSC_hg19_v1_chr11_-_117800150 NM_001077263 NM_001206789 NM_001206790 NM_001244995	-82911	-	NM_001083947 NM_001173551 NM_001173552 NM_019894 AK304113 AK311290 TSC_hg19_v1_chr11_+_117947754	64715	+	BC004855 TSC_hg19_v1_chr11_+_117947792 AK308434 AK296855 AK303173 AK290361 AK304215 AF179224 AY358530 AF216312 BC011703 AK172766	64799	+	TSC_hg19_v1_chr11_-_118016149 BC035017 NM_001142349	133130	-	U00672|IL10RA|3587|interleukin 10 receptor, alpha##BC028082|IL10RA|3587|interleukin 10 receptor, alpha##DQ891031|IL10RA|3587|interleukin 10 receptor, alpha##DQ893720|IL10RA|3587|interleukin 10 receptor, alpha##AK316146|IL10RA|3587|interleukin 10 receptor, alpha##AB209626|IL10RA|3587|interleukin 10 receptor, alpha##AK291645|IL10RA|3587|interleukin 10 receptor, alpha##AK301484|IL10RA|3587|interleukin 10 receptor, alpha##NM_001558|IL10RA|3587|interleukin 10 receptor, alpha##AK301260|IL10RA|3587|interleukin 10 receptor, alpha##AK316342|IL10RA|3587|interleukin 10 receptor, alpha##AK313049|IL10RA|3587|interleukin 10 receptor, alpha##AK301492|IL10RA|3587|interleukin 10 receptor, alpha##BC018715|TMPRSS13|84000|transmembrane protease, serine 13##AK300283|TMPRSS13|84000|transmembrane protease, serine 13##AB048796|TMPRSS13|84000|transmembrane protease, serine 13##AB048797|TMPRSS13|84000|transmembrane protease, serine 13##BC114928|TMPRSS13|84000|transmembrane protease, serine 13##AY190317|TMPRSS13|84000|transmembrane protease, serine 13##AK027798|TMPRSS13|84000|transmembrane protease, serine 13##NM_001077263|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206789|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206790|TMPRSS13|84000|transmembrane protease, serine 13##NM_001244995|TMPRSS13|84000|transmembrane protease, serine 13##NM_001083947|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173551|TMPRSS4|56649|transmembrane protease, serine 4##NM_001173552|TMPRSS4|56649|transmembrane protease, serine 4##NM_019894|TMPRSS4|56649|transmembrane protease, serine 4##AK304113|TMPRSS4|56649|transmembrane protease, serine 4##BC004855|TMPRSS4|56649|transmembrane protease, serine 4##AK308434|TMPRSS4|56649|transmembrane protease, serine 4##AK296855|TMPRSS4|56649|transmembrane protease, serine 4##AK303173|TMPRSS4|56649|transmembrane protease, serine 4##AK290361|TMPRSS4|56649|transmembrane protease, serine 4##AK304215|TMPRSS4|56649|transmembrane protease, serine 4##AF179224|TMPRSS4|56649|transmembrane protease, serine 4##AY358530|TMPRSS4|56649|transmembrane protease, serine 4##AF216312|TMPRSS4|56649|transmembrane protease, serine 4##BC011703|TMPRSS4|56649|transmembrane protease, serine 4##AK172766|TMPRSS4|56649|transmembrane protease, serine 4##BC035017|SCN4B|6330|sodium channel, voltage-gated, type IV, beta##NM_001142349|SCN4B|6330|sodium channel, voltage-gated, type IV, beta	0.0	
chr11	60786320	60786411	reg1038833.p1	3.438	+	NM_006725 TSC_hg19_v1_chr11_+_60739236 AK128419 AK312749 BC078669 BC033755 X60992 AK292704 DQ786329 DQ786330 U66142 U66145 U66146	-47140	+	BC037974 BC025710 AF135600 AB020598 NM_016582	-67179	-	TSC_hg19_v1_chr11_+_60691945 NM_017870 NM_178031 AK000546 BC114569 BC032059	-94430	+	NM_014207 AY541703 TSC_hg19_v1_chr11_+_60869960 AK292698 X04391 BC027901 DQ892077 DQ895270	83614	+	BC141827 BC142702 AK097326 TSC_hg19_v1_chr11_-_60928910 NM_017966 AL834261 AK302384	142565	-	NM_001079807 AK301286 AK301293 AK301305 AK312941 AK125628 AK225669 AK225679 AK291864 BC150659 BC171808 BC171814 BC171815 BC171910 BC171920 AB528778	184643	+	NM_006725|CD6|923|CD6 molecule##AK128419|CD6|923|CD6 molecule##AK312749|CD6|923|CD6 molecule##BC078669|CD6|923|CD6 molecule##BC033755|CD6|923|CD6 molecule##X60992|CD6|923|CD6 molecule##AK292704|CD6|923|CD6 molecule##DQ786329|CD6|923|CD6 molecule##DQ786330|CD6|923|CD6 molecule##U66142|CD6|923|CD6 molecule##U66145|CD6|923|CD6 molecule##U66146|CD6|923|CD6 molecule##BC037974|SLC15A3|51296|solute carrier family 15, member 3##BC025710|SLC15A3|51296|solute carrier family 15, member 3##AF135600|SLC15A3|51296|solute carrier family 15, member 3##AB020598|SLC15A3|51296|solute carrier family 15, member 3##NM_016582|SLC15A3|51296|solute carrier family 15, member 3##NM_017870|TMEM132A|54972|transmembrane protein 132A##NM_178031|TMEM132A|54972|transmembrane protein 132A##AK000546|TMEM132A|54972|transmembrane protein 132A##BC114569|TMEM132A|54972|transmembrane protein 132A##BC032059|TMEM132A|54972|transmembrane protein 132A##NM_014207|CD5|921|CD5 molecule##AY541703|CD5|921|CD5 molecule##AK292698|CD5|921|CD5 molecule##X04391|CD5|921|CD5 molecule##BC027901|CD5|921|CD5 molecule##DQ892077|CD5|921|CD5 molecule##DQ895270|CD5|921|CD5 molecule##BC141827|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##BC142702|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK097326|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_017966|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AL834261|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##AK302384|VPS37C|55048|vacuolar protein sorting 37 homolog C (S. cerevisiae)##NM_001079807|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301286|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301293|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK301305|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##AK312941|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK125628|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225669|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK225679|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##AK291864|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC150659|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171808|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171814|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171815|PGA3|643834|pepsinogen 3, group I (pepsinogen A)##BC171910|PGA4|643847|pepsinogen 4, group I (pepsinogen A)##BC171920|PGA4|643847|pepsinogen 4, group I (pepsinogen A)	0.0	
chr1	206983220	206983293	reg1015614.p2	3.438	+	AY040367 NM_153758 AB463800	-11030	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-37377	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-124785	+	AF453946 NM_013371	18965	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	55919	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	87544	+	AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24	0.0	
chr12	121454353	121454432	reg1045846.p2	3.438	+	TSC_hg19_v1_chr12_-_121454291 AK222630 AK299170 AK301566 AK022510 AK225162 NM_022895 AK307971	-98	-	TSC_hg19_v1_chr12_-_121454230 BC014661	-148	-	HM449088 HM449089 M57732 NM_000545 BC104908 BC104910 BC143483 TSC_hg19_v1_chr12_+_121416562 AB527468 EU446660	-37834	+	TSC_hg19_v1_chr12_-_121476781 HQ258301 AJ225089 AK314419 NM_003733 NM_198213 AK023956 BC117408 BC117410	22391	-	NM_002562 TSC_hg19_v1_chr12_+_121570744 AK294126 AK290405 AK296432 BC011913 BC121157 BC121158 AB209709 BC007679 AK090866 AK225163 AX746656 Y09561 GQ180122 DQ893457 DQ896337 AB590390 CU680114 AY847298 AY847299 AY847300 AY847301 AY847302 AY847303 AY847304 DQ399293	116309	+	U83993 NM_002560	193269	+	AK222630|C12orf43|64897|chromosome 12 open reading frame 43##AK299170|C12orf43|64897|chromosome 12 open reading frame 43##AK301566|C12orf43|64897|chromosome 12 open reading frame 43##AK022510|C12orf43|64897|chromosome 12 open reading frame 43##AK225162|C12orf43|64897|chromosome 12 open reading frame 43##NM_022895|C12orf43|64897|chromosome 12 open reading frame 43##AK307971|C12orf43|64897|chromosome 12 open reading frame 43##BC014661|C12orf43|64897|chromosome 12 open reading frame 43##HM449088|HNF1A|6927|HNF1 homeobox A##HM449089|HNF1A|6927|HNF1 homeobox A##M57732|HNF1A|6927|HNF1 homeobox A##NM_000545|HNF1A|6927|HNF1 homeobox A##BC104908|HNF1A|6927|HNF1 homeobox A##BC104910|HNF1A|6927|HNF1 homeobox A##BC143483|HNF1A|6927|HNF1 homeobox A##EU446660|HNF1A|6927|HNF1 homeobox A##HQ258301|OASL|8638|2'-5'-oligoadenylate synthetase-like##AJ225089|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK314419|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_003733|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_198213|OASL|8638|2'-5'-oligoadenylate synthetase-like##AK023956|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117408|OASL|8638|2'-5'-oligoadenylate synthetase-like##BC117410|OASL|8638|2'-5'-oligoadenylate synthetase-like##NM_002562|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK294126|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK290405|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK296432|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC011913|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121157|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC121158|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AB209709|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##BC007679|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK090866|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AK225163|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##Y09561|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##GQ180122|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ893457|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ896337|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847298|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847299|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847300|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847301|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847302|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847303|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##AY847304|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##DQ399293|P2RX7|5027|purinergic receptor P2X, ligand-gated ion channel, 7##U83993|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4##NM_002560|P2RX4|5025|purinergic receptor P2X, ligand-gated ion channel, 4	0.0	
chr12	48207059	48207239	reg1028442.p2	3.438	+	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-40115	+	AK092448 NM_001098531	-54275	-	NM_001098532 NM_006105 AK125545 U78168 U78169 BC092404 BC017728 BC068477 TSC_hg19_v1_chr12_-_48152622 BC040534 AK290230	-54740	-	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	6515	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	91652	-	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	150189	+	NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098532|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_006105|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK125545|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78168|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##U78169|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC092404|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC017728|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC068477|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##BC040534|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AK290230|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C	0.0	
chr13	40340089	40340192	reg1045937.p2	3.438	+	TSC_hg19_v1_chr13_+_40229813 AK294443 NM_001145079 NM_020751 BC051723 CR627406 AB032960 AF116827	-110279	+	NM_005780 TSC_hg19_v1_chr13_-_40177356	-162778	-	TSC_hg19_v1_chr13_-_40177309 AK129819 AK223369 AK313036	-162813	-	TSC_hg19_v1_chr13_-_41240783 BC021981 BC070065 AF032885 NM_002015	900572	-	Z68747 BC010159 AK315248 TSC_hg19_v1_chr13_-_41345306 BC022045	1005152	-	TSC_hg19_v1_chr13_-_41345327 NM_005830	1005192	-	AK294443|COG6|57511|component of oligomeric golgi complex 6##NM_001145079|COG6|57511|component of oligomeric golgi complex 6##NM_020751|COG6|57511|component of oligomeric golgi complex 6##BC051723|COG6|57511|component of oligomeric golgi complex 6##CR627406|COG6|57511|component of oligomeric golgi complex 6##AB032960|COG6|57511|component of oligomeric golgi complex 6##AF116827|COG6|57511|component of oligomeric golgi complex 6##NM_005780|LHFP|10186|lipoma HMGIC fusion partner##AK129819|LHFP|10186|lipoma HMGIC fusion partner##AK223369|LHFP|10186|lipoma HMGIC fusion partner##AK313036|LHFP|10186|lipoma HMGIC fusion partner##BC021981|FOXO1|2308|forkhead box O1##BC070065|FOXO1|2308|forkhead box O1##AF032885|FOXO1|2308|forkhead box O1##NM_002015|FOXO1|2308|forkhead box O1##Z68747|MRPS31|10240|mitochondrial ribosomal protein S31##BC010159|MRPS31|10240|mitochondrial ribosomal protein S31##AK315248|MRPS31|10240|mitochondrial ribosomal protein S31##BC022045|MRPS31|10240|mitochondrial ribosomal protein S31##NM_005830|MRPS31|10240|mitochondrial ribosomal protein S31	0.899467	CTCF.p2:4:0.899
chr15	101798716	101798892	reg1005333.p2	3.438	+	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	-6669	-	AB071402 TSC_hg19_v1_chr15_-_101791795	-7068	-	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-339292	+	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	18859	-	TSC_hg19_v1_chr15_-_101835402 AB528428 CU692724 AJ130971 AJ130972 DQ892838 DQ896084 BC071717	36577	-	TSC_hg19_v1_chr15_-_101835457 AK223110 AK312200 X13482 BC022816 AK290078 AK223070 BC067846 NM_003090	36627	-	BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S##AJ130971|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AJ130972|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##DQ892838|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##DQ896084|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC071717|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK223110|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK312200|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##X13482|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC022816|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK290078|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##AK223070|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##BC067846|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'##NM_003090|SNRPA1|6627|small nuclear ribonucleoprotein polypeptide A'	0.053307	
chr16	79801639	79801749	reg1044594.p1	3.438	+	AF055376 AF055377 BC038438 NM_001031804 NM_005360	-167079	-	TSC_hg19_v1_chr16_+_78133580 NM_016373 NM_130791 NM_130844 AK298322 AF211943 AF395123 AF395124 AK027626 AK291300 AK290438 AF227527 AF227529 AF227528 AF227526 BC003184 AF187015 AY256821 AB590073 BT007445	-1668239	+	NM_001244755	-1738709	+	AF125108 NM_130897 BC054892 BC035232	773194	+	TSC_hg19_v1_chr16_-_80837998 AX781671 AX781675 AB590934 CU686816 BC100803 BC100804 BC100805 BC100806 BC069440 AX781670 AK096185 NM_152342 AY273798	1036353	-	TSC_hg19_v1_chr16_+_81040102 AK023669 NM_001100624 NM_001100625 NM_018455	1238390	+	AF055376|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##AF055377|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##BC038438|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_001031804|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_005360|MAF|4094|v-maf musculoaponeurotic fibrosarcoma oncogene homolog (avian)##NM_016373|WWOX|51741|WW domain containing oxidoreductase##NM_130791|WWOX|51741|WW domain containing oxidoreductase##NM_130844|WWOX|51741|WW domain containing oxidoreductase##AK298322|WWOX|51741|WW domain containing oxidoreductase##AF211943|WWOX|51741|WW domain containing oxidoreductase##AF395123|WWOX|51741|WW domain containing oxidoreductase##AF395124|WWOX|51741|WW domain containing oxidoreductase##AK027626|WWOX|51741|WW domain containing oxidoreductase##AK291300|WWOX|51741|WW domain containing oxidoreductase##AK290438|WWOX|51741|WW domain containing oxidoreductase##AF227527|WWOX|51741|WW domain containing oxidoreductase##AF227529|WWOX|51741|WW domain containing oxidoreductase##AF227528|WWOX|51741|WW domain containing oxidoreductase##AF227526|WWOX|51741|WW domain containing oxidoreductase##BC003184|WWOX|51741|WW domain containing oxidoreductase##AF187015|WWOX|51741|WW domain containing oxidoreductase##AY256821|WWOX|51741|WW domain containing oxidoreductase##BT007445|WWOX|51741|WW domain containing oxidoreductase##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A##AF125108|DYNLRB2|83657|dynein, light chain, roadblock-type 2##NM_130897|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC054892|DYNLRB2|83657|dynein, light chain, roadblock-type 2##BC035232|DYNLRB2|83657|dynein, light chain, roadblock-type 2##AX781671|CDYL2|124359|chromodomain protein, Y-like 2##BC100803|CDYL2|124359|chromodomain protein, Y-like 2##BC100804|CDYL2|124359|chromodomain protein, Y-like 2##BC100805|CDYL2|124359|chromodomain protein, Y-like 2##BC100806|CDYL2|124359|chromodomain protein, Y-like 2##BC069440|CDYL2|124359|chromodomain protein, Y-like 2##AX781670|CDYL2|124359|chromodomain protein, Y-like 2##AK096185|CDYL2|124359|chromodomain protein, Y-like 2##NM_152342|CDYL2|124359|chromodomain protein, Y-like 2##AY273798|CDYL2|124359|chromodomain protein, Y-like 2##AK023669|CENPN|55839|centromere protein N##NM_001100624|CENPN|55839|centromere protein N##NM_001100625|CENPN|55839|centromere protein N##NM_018455|CENPN|55839|centromere protein N	0.964945	CTCF.p2:-11:0.965
chr19	2162734	2162874	reg1036534.p2	3.438	+	TSC_hg19_v1_chr19_-_2151551 NM_001077523 NM_003938	-11251	-	BC010065 TSC_hg19_v1_chr19_-_2151549 U91930 AB208804	-11262	-	CU679595 AB384738 BC005142 TSC_hg19_v1_chr19_-_2151519	-11379	-	TSC_hg19_v1_chr19_+_2164154 AF509504 NM_032482	1334	+	BC021037 TSC_hg19_v1_chr19_+_2222534	59670	+	BC032803 TSC_hg19_v1_chr19_+_2232168	69317	+	NM_001077523|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##NM_003938|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC010065|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##U91930|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AB208804|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##BC005142|AP3D1|8943|adaptor-related protein complex 3, delta 1 subunit##AF509504|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##NM_032482|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC021037|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)##BC032803|DOT1L|84444|DOT1-like, histone H3 methyltransferase (S. cerevisiae)	0.0	
chr19	37663470	37663650	reg1041346.p1	3.438	+	NM_199126 BC052956	-226	-	TSC_hg19_v1_chr19_+_37569355 AK315728 AK056753 BC026210 NM_144689	-94216	+	NM_001204835 NM_001204836 NM_001204837 NM_001204838 NM_001204839 NM_198539 BC016334 BC031218 BX640681 TSC_hg19_v1_chr19_+_37407267 BC108696 AK299626 AK093123 AX747939 BC131547 BC111777	-256221	+	AF086428 BC063820 TSC_hg19_v1_chr19_-_37663623 AK056389 NM_152655 AK290660 BC026081	37	-	BC051277 BC067088 BC080550 TSC_hg19_v1_chr19_-_37701446 AY147015 NM_152279	37857	-	TSC_hg19_v1_chr19_+_37709098 AK122892	45588	+	NM_199126|ZNF585A|199704|zinc finger protein 585A##BC052956|ZNF585A|199704|zinc finger protein 585A##AK315728|ZNF420|147923|zinc finger protein 420##AK056753|ZNF420|147923|zinc finger protein 420##BC026210|ZNF420|147923|zinc finger protein 420##NM_144689|ZNF420|147923|zinc finger protein 420##NM_001204835|ZNF568|374900|zinc finger protein 568##NM_001204836|ZNF568|374900|zinc finger protein 568##NM_001204837|ZNF568|374900|zinc finger protein 568##NM_001204838|ZNF568|374900|zinc finger protein 568##NM_001204839|ZNF568|374900|zinc finger protein 568##NM_198539|ZNF568|374900|zinc finger protein 568##BC016334|ZNF568|374900|zinc finger protein 568##BC031218|ZNF568|374900|zinc finger protein 568##BX640681|ZNF568|374900|zinc finger protein 568##BC108696|ZNF568|374900|zinc finger protein 568##AK299626|ZNF568|374900|zinc finger protein 568##AK093123|ZNF568|374900|zinc finger protein 568##BC131547|ZNF568|374900|zinc finger protein 568##BC111777|ZNF568|374900|zinc finger protein 568##AF086428|ZNF585A|199704|zinc finger protein 585A##BC063820|ZNF585A|199704|zinc finger protein 585A##AK056389|ZNF585A|199704|zinc finger protein 585A##NM_152655|ZNF585A|199704|zinc finger protein 585A##AK290660|ZNF585A|199704|zinc finger protein 585A##BC026081|ZNF585A|199704|zinc finger protein 585A##BC051277|ZNF585B|92285|zinc finger protein 585B##BC067088|ZNF585B|92285|zinc finger protein 585B##BC080550|ZNF585B|92285|zinc finger protein 585B##AY147015|ZNF585B|92285|zinc finger protein 585B##NM_152279|ZNF585B|92285|zinc finger protein 585B##AK122892|ZNF383|163087|zinc finger protein 383	0.0	
chr20	61439577	61439757	reg1011438.p1	3.438	+	TSC_hg19_v1_chr20_+_61436186 NM_007346 AK314696 AK022234 AF109134 BC008768 BC014137 CU680798 DQ892943 EU176723 BC032666	-3474	+	AK001776 NM_018270 TSC_hg19_v1_chr20_+_61427832 BC014235 BC009889 BC018841 AB085682 AB463516	-11820	+	TSC_hg19_v1_chr20_+_61340165 NM_002531 X70070	-99491	+	TSC_hg19_v1_chr20_+_61448401 BC011705 NM_001853 DQ892946 DQ896194 L41162	8736	+	NM_080750	36808	+	AF070992 AB012124 BC065520 BC046933 NM_006602 TSC_hg19_v1_chr20_-_61493138	53389	-	NM_007346|OGFR|11054|opioid growth factor receptor##AK314696|OGFR|11054|opioid growth factor receptor##AK022234|OGFR|11054|opioid growth factor receptor##AF109134|OGFR|11054|opioid growth factor receptor##BC008768|OGFR|11054|opioid growth factor receptor##BC014137|OGFR|11054|opioid growth factor receptor##DQ892943|OGFR|11054|opioid growth factor receptor##EU176723|OGFR|11054|opioid growth factor receptor##BC032666|OGFR|11054|opioid growth factor receptor##AK001776|C20orf20|55257|chromosome 20 open reading frame 20##NM_018270|C20orf20|55257|chromosome 20 open reading frame 20##BC014235|C20orf20|55257|chromosome 20 open reading frame 20##BC009889|C20orf20|55257|chromosome 20 open reading frame 20##BC018841|C20orf20|55257|chromosome 20 open reading frame 20##AB085682|C20orf20|55257|chromosome 20 open reading frame 20##NM_002531|NTSR1|4923|neurotensin receptor 1 (high affinity)##X70070|NTSR1|4923|neurotensin receptor 1 (high affinity)##BC011705|COL9A3|1299|collagen, type IX, alpha 3##NM_001853|COL9A3|1299|collagen, type IX, alpha 3##DQ892946|COL9A3|1299|collagen, type IX, alpha 3##DQ896194|COL9A3|1299|collagen, type IX, alpha 3##L41162|COL9A3|1299|collagen, type IX, alpha 3##NM_080750|DPH3P1|100132911|DPH3, KTI11 homolog (S. cerevisiae) pseudogene 1##AF070992|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##AB012124|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC065520|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##BC046933|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)##NM_006602|TCFL5|10732|transcription factor-like 5 (basic helix-loop-helix)	0.0	
chr2	204555746	204555855	reg1043781.p1	3.438	+	TSC_hg19_v1_chr2_-_204399987 BC032486 AK096270 AB053311 AJ584699 AY494951 AY523977 AY523978 NM_203365 NM_213589	-155654	-	TSC_hg19_v1_chr2_+_204193004 NM_005759 AK311427 AK302853 AK294429 AK299824 AK316000 BC001439 AB590360 AF260261 BT009920 CU674706 DQ890735 DQ893907	-362665	+	TSC_hg19_v1_chr2_+_204103740 AF183412 AK297082 BC093022 BC033752 BC020616 AL832998 AY359068 AK307931 DQ890918 DQ894068 DQ894069 CU676580	-452079	+	NM_001243077 NM_001243078 NM_006139 AJ517504 AK313313 J02988 TSC_hg19_v1_chr2_+_204571361 AK303421	15480	+	BC093698 BC112085 TSC_hg19_v1_chr2_+_204571384 AK292986 AB590652 AF222341 AF222342 AF222343 AJ295273	15599	+	BC070162 AF414120 NM_001037631 NM_005214 AK313732 BC069566 BC074893 BC074842 AB590653 AF486806 AY209009 AY792514 AY999702 DQ785106 L15006	176787	+	AK096270|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AB053311|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AJ584699|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY494951|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523977|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##AY523978|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_203365|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_213589|RAPH1|65059|Ras association (RalGDS/AF-6) and pleckstrin homology domains 1##NM_005759|ABI2|10152|abl-interactor 2##AK302853|ABI2|10152|abl-interactor 2##AK294429|ABI2|10152|abl-interactor 2##AK299824|ABI2|10152|abl-interactor 2##AK316000|ABI2|10152|abl-interactor 2##BC001439|ABI2|10152|abl-interactor 2##AF260261|ABI2|10152|abl-interactor 2##BT009920|ABI2|10152|abl-interactor 2##DQ890735|ABI2|10152|abl-interactor 2##DQ893907|ABI2|10152|abl-interactor 2##AF183412|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK297082|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC093022|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC033752|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##BC020616|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AL832998|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AY359068|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##AK307931|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ890918|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ894068|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##DQ894069|CYP20A1|57404|cytochrome P450, family 20, subfamily A, polypeptide 1##NM_001243077|CD28|940|CD28 molecule##NM_001243078|CD28|940|CD28 molecule##NM_006139|CD28|940|CD28 molecule##AJ517504|CD28|940|CD28 molecule##AK313313|CD28|940|CD28 molecule##J02988|CD28|940|CD28 molecule##AK303421|CD28|940|CD28 molecule##BC093698|CD28|940|CD28 molecule##BC112085|CD28|940|CD28 molecule##AK292986|CD28|940|CD28 molecule##AF222341|CD28|940|CD28 molecule##AF222342|CD28|940|CD28 molecule##AF222343|CD28|940|CD28 molecule##AJ295273|CD28|940|CD28 molecule##BC070162|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF414120|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_001037631|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##NM_005214|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AK313732|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC069566|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074893|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##BC074842|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AF486806|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY209009|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY792514|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##AY999702|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##DQ785106|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4##L15006|CTLA4|1493|cytotoxic T-lymphocyte-associated protein 4	0.0	
chr2	231467304	231467371	reg1031206.p1	3.438	+	AK091898 NM_001206704	-185867	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-186381	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-186418	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	110209	+	TSC_hg19_v1_chr2_+_231577633 BC020570	110307	+	AK292382 NM_001130849 NM_001130850 AK315692	110941	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.0	
chr4	185435433	185435613	reg1031747.p1	3.438	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	-39842	-	BC035035 AY358676 AK057370 NM_153343	-296458	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-607612	+	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	135078	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	135310	+	TSC_hg19_v1_chr4_+_185570923 BC064600 AK307317	135406	+	X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111##BC064600|CCDC111|201973|coiled-coil domain containing 111##AK307317|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr6	107292955	107293108	reg1035439.p1	3.438	+	NM_018292 TSC_hg19_v1_chr6_+_107077455 AK225262 AL136679 AK225443 AK314694 BC014389 AK001851 BC006084 AK022251 AK023509 CU675233	-215534	+	BC006399 AK313962 TSC_hg19_v1_chr6_-_107077358 NM_032730	-215751	-	TSC_hg19_v1_chr6_+_106960443 U83115	-332620	+	TSC_hg19_v1_chr6_+_107349444 NM_001142468 NM_001142470 NM_016487 AF151064 AK091564	56441	+	BC131628 NM_001080450	142604	-	TSC_hg19_v1_chr6_-_107780686 AK000293 AF254956 BC039906 AK225629 AK296717 AK301480 AK315804 BC029491 NM_020381	487699	-	NM_018292|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225262|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AL136679|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK225443|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK314694|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC014389|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK001851|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006084|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK022251|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##AK023509|QRSL1|55278|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1##BC006399|RTN4IP1|84816|reticulon 4 interacting protein 1##AK313962|RTN4IP1|84816|reticulon 4 interacting protein 1##NM_032730|RTN4IP1|84816|reticulon 4 interacting protein 1##U83115|AIM1|202|absent in melanoma 1##NM_001142468|C6orf203|51250|chromosome 6 open reading frame 203##NM_001142470|C6orf203|51250|chromosome 6 open reading frame 203##NM_016487|C6orf203|51250|chromosome 6 open reading frame 203##AF151064|C6orf203|51250|chromosome 6 open reading frame 203##AK091564|C6orf203|51250|chromosome 6 open reading frame 203##BC131628|BEND3|57673|BEN domain containing 3##NM_001080450|BEND3|57673|BEN domain containing 3##AF254956|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC039906|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK225629|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK296717|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK301480|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##AK315804|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##BC029491|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2##NM_020381|PDSS2|57107|prenyl (decaprenyl) diphosphate synthase, subunit 2	0.0	
chr6	143834425	143834518	reg1008367.p1	3.438	+	CU678350 AK296485 BC003060 AK075458 TSC_hg19_v1_chr6_-_143832841 AY358551 BC051268 AK315475 NM_032020	-1577	-	TSC_hg19_v1_chr6_+_143771941 NM_003630 BC014551 BC015506 AB035307 AK025644 AK300907 AJ001625 AJ131389 AY277600 CR542062 CU677325	-62471	+	TSC_hg19_v1_chr6_-_143771811 BC037955 NM_182503	-62642	-	NM_001100166 NM_014721 AK300221 AB014580 BC152416 BC150630	94891	+	TSC_hg19_v1_chr6_+_143999112 AK298263 NM_001100164 NM_001100165 CR749345 AK297799	164706	+	TSC_hg19_v1_chr6_+_144164476 AK095269 BC009855 NM_032860	330018	+	AK296485|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC003060|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK075458|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AY358551|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC051268|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK315475|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_032020|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_003630|PEX3|8504|peroxisomal biogenesis factor 3##BC014551|PEX3|8504|peroxisomal biogenesis factor 3##BC015506|PEX3|8504|peroxisomal biogenesis factor 3##AB035307|PEX3|8504|peroxisomal biogenesis factor 3##AK025644|PEX3|8504|peroxisomal biogenesis factor 3##AK300907|PEX3|8504|peroxisomal biogenesis factor 3##AJ001625|PEX3|8504|peroxisomal biogenesis factor 3##AJ131389|PEX3|8504|peroxisomal biogenesis factor 3##AY277600|PEX3|8504|peroxisomal biogenesis factor 3##CR542062|PEX3|8504|peroxisomal biogenesis factor 3##BC037955|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_182503|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_001100166|PHACTR2|9749|phosphatase and actin regulator 2##NM_014721|PHACTR2|9749|phosphatase and actin regulator 2##AK300221|PHACTR2|9749|phosphatase and actin regulator 2##AB014580|PHACTR2|9749|phosphatase and actin regulator 2##BC152416|PHACTR2|9749|phosphatase and actin regulator 2##BC150630|PHACTR2|9749|phosphatase and actin regulator 2##AK298263|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100164|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100165|PHACTR2|9749|phosphatase and actin regulator 2##CR749345|PHACTR2|9749|phosphatase and actin regulator 2##AK297799|PHACTR2|9749|phosphatase and actin regulator 2##BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)##NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)	0.0	
chr9	132782279	132782414	reg1035924.p1	3.438	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-184581	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-184624	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-184662	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	23008	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	23142	-	BC039728 NM_001136557 NM_001136558 NM_020960	33638	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr11	102217843	102217951	reg1026916.p2	3.437	+	NM_001165 NM_182962 TSC_hg19_v1_chr11_+_102188214 AF070674	-29695	+	NM_001195045 AK316116	-234690	+	TSC_hg19_v1_chr11_+_101981177 AK300414 NM_001130145 NM_001195044 NM_006106 BC038235 AB528588 AB567720 AB567721 AY316529	-236695	+	TSC_hg19_v1_chr11_+_102217944 AK303197	32	+	TSC_hg19_v1_chr11_+_102217954 BX647978 NM_001166 AF207599 BC028578	131	+	CU689316 DQ891654 DQ894842 TSC_hg19_v1_chr11_-_102323497 AY358696 BC032296 AY157580 AK075420 AY008283 AK225790 NM_052932	105716	-	NM_001165|BIRC3|330|baculoviral IAP repeat containing 3##NM_182962|BIRC3|330|baculoviral IAP repeat containing 3##AF070674|BIRC3|330|baculoviral IAP repeat containing 3##NM_001195045|YAP1|10413|Yes-associated protein 1##AK316116|YAP1|10413|Yes-associated protein 1##AK300414|YAP1|10413|Yes-associated protein 1##NM_001130145|YAP1|10413|Yes-associated protein 1##NM_001195044|YAP1|10413|Yes-associated protein 1##NM_006106|YAP1|10413|Yes-associated protein 1##BC038235|YAP1|10413|Yes-associated protein 1##AB567720|YAP1|10413|Yes-associated protein 1##AB567721|YAP1|10413|Yes-associated protein 1##AY316529|YAP1|10413|Yes-associated protein 1##AK303197|BIRC2|329|baculoviral IAP repeat containing 2##BX647978|BIRC2|329|baculoviral IAP repeat containing 2##NM_001166|BIRC2|329|baculoviral IAP repeat containing 2##BC028578|BIRC2|329|baculoviral IAP repeat containing 2##DQ891654|TMEM123|114908|transmembrane protein 123##DQ894842|TMEM123|114908|transmembrane protein 123##AY358696|TMEM123|114908|transmembrane protein 123##BC032296|TMEM123|114908|transmembrane protein 123##AY157580|TMEM123|114908|transmembrane protein 123##AK075420|TMEM123|114908|transmembrane protein 123##AY008283|TMEM123|114908|transmembrane protein 123##AK225790|TMEM123|114908|transmembrane protein 123##NM_052932|TMEM123|114908|transmembrane protein 123	0.0	
chr11	117775444	117775529	reg1040065.p1	3.437	+	NM_001164831	-27286	-	TSC_hg19_v1_chr11_-_117747623 AK289629 NM_001164832 NM_001164836 NM_001164837 NM_001204268 NM_001243598 NM_022003	-27805	-	AL136699 TSC_hg19_v1_chr11_-_117747374 AY358976 BC018652 BC093040 AK311736 AL832811 AK290757	-28097	-	BC018715 AK300283 AB048796 AB048797 BC114928 AY190317 AK027798 TSC_hg19_v1_chr11_-_117800150 NM_001077263 NM_001206789 NM_001206790 NM_001244995	24631	-	TSC_hg19_v1_chr11_+_117857108 AK291645 AK301484 NM_001558 AK301260 AK316342 AK313049 AK301492	81604	+	TSC_hg19_v1_chr11_+_117857155 U00672 BC028082 AB590303 CU688390 DQ891031 DQ893720 AK316146 AB209626	81801	+	NM_001164831|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK289629|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164832|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164836|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001164837|FXYD6|53826|FXYD domain containing ion transport regulator 6##NM_001204268|FXYD6-FXYD2|100533181|FXYD6-FXYD2 readthrough##NM_001243598|FXYD6-FXYD2|100533181|FXYD6-FXYD2 readthrough##NM_022003|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL136699|FXYD6|53826|FXYD domain containing ion transport regulator 6##AY358976|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018652|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC093040|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK311736|FXYD6|53826|FXYD domain containing ion transport regulator 6##AL832811|FXYD6|53826|FXYD domain containing ion transport regulator 6##AK290757|FXYD6|53826|FXYD domain containing ion transport regulator 6##BC018715|TMPRSS13|84000|transmembrane protease, serine 13##AK300283|TMPRSS13|84000|transmembrane protease, serine 13##AB048796|TMPRSS13|84000|transmembrane protease, serine 13##AB048797|TMPRSS13|84000|transmembrane protease, serine 13##BC114928|TMPRSS13|84000|transmembrane protease, serine 13##AY190317|TMPRSS13|84000|transmembrane protease, serine 13##AK027798|TMPRSS13|84000|transmembrane protease, serine 13##NM_001077263|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206789|TMPRSS13|84000|transmembrane protease, serine 13##NM_001206790|TMPRSS13|84000|transmembrane protease, serine 13##NM_001244995|TMPRSS13|84000|transmembrane protease, serine 13##AK291645|IL10RA|3587|interleukin 10 receptor, alpha##AK301484|IL10RA|3587|interleukin 10 receptor, alpha##NM_001558|IL10RA|3587|interleukin 10 receptor, alpha##AK301260|IL10RA|3587|interleukin 10 receptor, alpha##AK316342|IL10RA|3587|interleukin 10 receptor, alpha##AK313049|IL10RA|3587|interleukin 10 receptor, alpha##AK301492|IL10RA|3587|interleukin 10 receptor, alpha##U00672|IL10RA|3587|interleukin 10 receptor, alpha##BC028082|IL10RA|3587|interleukin 10 receptor, alpha##DQ891031|IL10RA|3587|interleukin 10 receptor, alpha##DQ893720|IL10RA|3587|interleukin 10 receptor, alpha##AK316146|IL10RA|3587|interleukin 10 receptor, alpha##AB209626|IL10RA|3587|interleukin 10 receptor, alpha	0.25961	CTCF.p2:33:0.260
chr11	9082262	9082368	reg1033399.p1	3.437	+	BC008835 TSC_hg19_v1_chr11_-_9025549 AK024750 AK098694 AK296484 NM_020645	-56752	-	BC040124 TSC_hg19_v1_chr11_-_8986002	-96306	-	TSC_hg19_v1_chr11_-_8985986 AY359069 NM_020644	-96340	-	BC111690 AK131552 AK123039 NM_001170690 NM_020974 TSC_hg19_v1_chr11_-_9113185	30823	-	TSC_hg19_v1_chr11_-_9225783 AK302478	143506	-	AB029014 TSC_hg19_v1_chr11_-_9286891 BC071596 NM_001243254 NM_015213	204547	-	BC008835|NRIP3|56675|nuclear receptor interacting protein 3##AK024750|NRIP3|56675|nuclear receptor interacting protein 3##AK098694|NRIP3|56675|nuclear receptor interacting protein 3##AK296484|NRIP3|56675|nuclear receptor interacting protein 3##NM_020645|NRIP3|56675|nuclear receptor interacting protein 3##BC040124|TMEM9B|56674|TMEM9 domain family, member B##AY359069|TMEM9B|56674|TMEM9 domain family, member B##NM_020644|TMEM9B|56674|TMEM9 domain family, member B##BC111690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK131552|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK123039|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_001170690|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##NM_020974|SCUBE2|57758|signal peptide, CUB domain, EGF-like 2##AK302478|DENND5A|23258|DENN/MADD domain containing 5A##AB029014|DENND5A|23258|DENN/MADD domain containing 5A##BC071596|DENND5A|23258|DENN/MADD domain containing 5A##NM_001243254|DENND5A|23258|DENN/MADD domain containing 5A##NM_015213|DENND5A|23258|DENN/MADD domain containing 5A	0.588066	CTCF.p2:7:0.588
chr12	101721807	101721877	reg1038842.p2	3.437	+	TSC_hg19_v1_chr12_+_101673904 NM_014503 AK307934 AJ006778	-47937	+	AK313788 AF536216 AY081220 NM_145913	-117843	-	NM_178826 TSC_hg19_v1_chr12_+_101188522 AK091591 AX747079 AK316105 AK293810	-533288	+	TSC_hg19_v1_chr12_-_101801573 AK311793 AK302911 AK299062 BC007000 BX537387 NM_001177	79701	-	AK296681 NM_002465 NM_206819 NM_206820 NM_206821 AK056587 AK292976 AK295727 AK303401 BC015187 BC030980 BC065720 TSC_hg19_v1_chr12_+_101988748 BC092418 X66276 X73114 AL831993 AL832000 AL832332 AL832350 AL832354 AL832456 BC117217 BC143495 BC143502 BC143503 BC143504 AL834249 BX649073 AB385254 AM392734 EU831907 EU832001	266954	+	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	369780	+	NM_014503|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK307934|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AJ006778|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK313788|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AF536216|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AY081220|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_145913|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_178826|ANO4|121601|anoctamin 4##AK091591|ANO4|121601|anoctamin 4##AK316105|ANO4|121601|anoctamin 4##AK293810|ANO4|121601|anoctamin 4##AK311793|ARL1|400|ADP-ribosylation factor-like 1##AK302911|ARL1|400|ADP-ribosylation factor-like 1##AK299062|ARL1|400|ADP-ribosylation factor-like 1##BC007000|ARL1|400|ADP-ribosylation factor-like 1##BX537387|ARL1|400|ADP-ribosylation factor-like 1##NM_001177|ARL1|400|ADP-ribosylation factor-like 1##AK296681|MYBPC1|4604|myosin binding protein C, slow type##NM_002465|MYBPC1|4604|myosin binding protein C, slow type##NM_206819|MYBPC1|4604|myosin binding protein C, slow type##NM_206820|MYBPC1|4604|myosin binding protein C, slow type##NM_206821|MYBPC1|4604|myosin binding protein C, slow type##AK056587|MYBPC1|4604|myosin binding protein C, slow type##AK292976|MYBPC1|4604|myosin binding protein C, slow type##AK295727|MYBPC1|4604|myosin binding protein C, slow type##AK303401|MYBPC1|4604|myosin binding protein C, slow type##BC015187|MYBPC1|4604|myosin binding protein C, slow type##BC030980|MYBPC1|4604|myosin binding protein C, slow type##BC065720|MYBPC1|4604|myosin binding protein C, slow type##BC092418|MYBPC1|4604|myosin binding protein C, slow type##X66276|MYBPC1|4604|myosin binding protein C, slow type##X73114|MYBPC1|4604|myosin binding protein C, slow type##AL831993|MYBPC1|4604|myosin binding protein C, slow type##AL832000|MYBPC1|4604|myosin binding protein C, slow type##AL832332|MYBPC1|4604|myosin binding protein C, slow type##AL832350|MYBPC1|4604|myosin binding protein C, slow type##AL832354|MYBPC1|4604|myosin binding protein C, slow type##AL832456|MYBPC1|4604|myosin binding protein C, slow type##BC117217|MYBPC1|4604|myosin binding protein C, slow type##BC143495|MYBPC1|4604|myosin binding protein C, slow type##BC143502|MYBPC1|4604|myosin binding protein C, slow type##BC143503|MYBPC1|4604|myosin binding protein C, slow type##BC143504|MYBPC1|4604|myosin binding protein C, slow type##AL834249|MYBPC1|4604|myosin binding protein C, slow type##BX649073|MYBPC1|4604|myosin binding protein C, slow type##AM392734|MYBPC1|4604|myosin binding protein C, slow type##EU831907|MYBPC1|4604|myosin binding protein C, slow type##EU832001|MYBPC1|4604|myosin binding protein C, slow type##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1	0.0	
chr12	92862244	92862369	reg1037229.p1	3.437	+	AJ845168 NM_001025232	-40383	-	AJ845165 AJ845166 NM_001025233	-44572	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-322663	-	NM_001037671 NM_001178097	234312	+	NM_001004330 AK128530	267981	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	460632	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.0	
chr1	32531768	32531834	reg1028237.p1	3.437	+	TSC_hg19_v1_chr1_+_32479463 AK293369 AK091346 AX746925 AK312916 AK303218 BC000717 BC019109 M88108 NM_006559 BC010132 AB590354 DQ895323 U78971	-52303	+	TSC_hg19_v1_chr1_-_32403992 NM_080391	-127804	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	-127870	-	TSC_hg19_v1_chr1_+_32538502 AK023331 NM_018056	6703	+	AL136695 TSC_hg19_v1_chr1_+_32538539 AK001177 BC004364 AK296653 AK298766 AK300293	6773	+	TSC_hg19_v1_chr1_+_32573647 NM_012316 AB621806 AK002111 AK315490 AK128609 BC020520 AF060543	41846	+	AK293369|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK091346|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK312916|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##AK303218|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC000717|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC019109|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##M88108|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##NM_006559|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##BC010132|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##DQ895323|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##U78971|KHDRBS1|10657|KH domain containing, RNA binding, signal transduction associated 1##NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##AK023331|TMEM39B|55116|transmembrane protein 39B##NM_018056|TMEM39B|55116|transmembrane protein 39B##AL136695|TMEM39B|55116|transmembrane protein 39B##AK001177|TMEM39B|55116|transmembrane protein 39B##BC004364|TMEM39B|55116|transmembrane protein 39B##AK296653|TMEM39B|55116|transmembrane protein 39B##AK298766|TMEM39B|55116|transmembrane protein 39B##AK300293|TMEM39B|55116|transmembrane protein 39B##NM_012316|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AK002111|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AK315490|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AK128609|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##BC020520|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)##AF060543|KPNA6|23633|karyopherin alpha 6 (importin alpha 7)	0.0	
chr13	34302875	34303017	reg1037375.p1	3.437	+	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	-52011	-	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	-378178	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	-443079	-	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	89281	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	89338	+	TSC_hg19_v1_chr13_+_35516429 NM_015678 AF467288	1213512	+	BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_015678|NBEA|26960|neurobeachin##AF467288|NBEA|26960|neurobeachin	0.0	
chr1	33521017	33521198	reg1006098.p2	3.437	+	TSC_hg19_v1_chr1_-_33502485 NM_001199199 NM_001625 NM_013411	-18607	-	AB005622 TSC_hg19_v1_chr1_-_33502470	-18632	-	TSC_hg19_v1_chr1_-_33502465 AB005621	-18641	-	TSC_hg19_v1_chr1_+_33546755 BC028128 NM_052998 AK095127 AL832640 AK057051 AK315677 AY325129 BC010449	25626	+	TSC_hg19_v1_chr1_-_33647643 AX775827 AX775829 AX776017 AK122896 NM_018207	126541	-	TSC_hg19_v1_chr1_+_33722167 NM_152493	201058	+	NM_001199199|AK2|204|adenylate kinase 2##NM_001625|AK2|204|adenylate kinase 2##NM_013411|AK2|204|adenylate kinase 2##AB005622|AK2|204|adenylate kinase 2##AB005621|AK2|204|adenylate kinase 2##BC028128|ADC|113451|arginine decarboxylase##NM_052998|ADC|113451|arginine decarboxylase##AK095127|ADC|113451|arginine decarboxylase##AL832640|ADC|113451|arginine decarboxylase##AK057051|ADC|113451|arginine decarboxylase##AK315677|ADC|113451|arginine decarboxylase##AY325129|ADC|113451|arginine decarboxylase##BC010449|ADC|113451|arginine decarboxylase##AK122896|TRIM62|55223|tripartite motif containing 62##NM_018207|TRIM62|55223|tripartite motif containing 62##NM_152493|ZNF362|149076|zinc finger protein 362	0.138152	
chr14	60679698	60679841	reg1036258.p2	3.437	+	TSC_hg19_v1_chr14_-_60632103 BC007337 AF151844 AK313285 AL117420 NM_016029	-47635	-	AY359031 TSC_hg19_v1_chr14_-_60632031 BC000637	-47737	-	NM_022495 TSC_hg19_v1_chr14_+_60558640 AK095489	-120942	+	AK097843 NM_177952 AK313337	32702	+	TSC_hg19_v1_chr14_+_60715965 NM_021003 NM_177951	36189	+	TSC_hg19_v1_chr14_+_60715993 S87759 BC026691 AF070670 BC063243 AK308225	36342	+	BC007337|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AF151844|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AK313285|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AL117420|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_016029|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AY359031|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC000637|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_022495|C14orf135|64430|chromosome 14 open reading frame 135##AK095489|C14orf135|64430|chromosome 14 open reading frame 135##AK097843|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_177952|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AK313337|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_021003|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##NM_177951|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##S87759|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC026691|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AF070670|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##BC063243|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A##AK308225|PPM1A|5494|protein phosphatase, Mg2+/Mn2+ dependent, 1A	0.0	
chr15	82102012	82102106	reg1038803.p2	3.437	+	NM_001080532 BC132679 BC143410 BC157874 AY263163 AY236490 BX640632	-435574	-	AF480304 TSC_hg19_v1_chr15_-_81616503 BC004365 AK026352 AK097024 AK225479 AL137657 NM_181900	-485565	-	TSC_hg19_v1_chr15_+_81589328 NM_004513 U82972 AK222512 BC064911 BC050362	-512755	+	AK094145 TSC_hg19_v1_chr15_-_82336883	234824	-	TSC_hg19_v1_chr15_-_82338360 AK131424 NM_032246	236307	-	AB095929 BC111545 BC036211 TSC_hg19_v1_chr15_-_82338485	236417	-	NM_001080532|TMC3|342125|transmembrane channel-like 3##BC132679|TMC3|342125|transmembrane channel-like 3##BC143410|TMC3|342125|transmembrane channel-like 3##BC157874|TMC3|342125|transmembrane channel-like 3##AY263163|TMC3|342125|transmembrane channel-like 3##AY236490|TMC3|342125|transmembrane channel-like 3##AF480304|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##BC004365|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK026352|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK097024|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AK225479|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##AL137657|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_181900|STARD5|80765|StAR-related lipid transfer (START) domain containing 5##NM_004513|IL16|3603|interleukin 16##U82972|IL16|3603|interleukin 16##AK222512|IL16|3603|interleukin 16##BC064911|IL16|3603|interleukin 16##BC050362|IL16|3603|interleukin 16##AK094145|MEX3B|84206|mex-3 homolog B (C. elegans)##AK131424|MEX3B|84206|mex-3 homolog B (C. elegans)##NM_032246|MEX3B|84206|mex-3 homolog B (C. elegans)##AB095929|MEX3B|84206|mex-3 homolog B (C. elegans)##BC111545|MEX3B|84206|mex-3 homolog B (C. elegans)##BC036211|MEX3B|84206|mex-3 homolog B (C. elegans)	0.97617	CTCF.p2:2:0.976
chr16	89076022	89076108	reg1040475.p1	3.437	+	AB527670 EU446890 BC047019 AK314766 AB010419 BC062624 NM_005187 TSC_hg19_v1_chr16_-_89043569	-32662	-	AB010420 NM_175931	-68459	-	AB528852 EU190484 BC130001 BC130002 NM_001080487	-143024	-	TSC_hg19_v1_chr16_-_89119364 AK055272	43304	-	NM_001127214 NM_001243279 NM_174917 TSC_hg19_v1_chr16_+_89160259	84172	+	TSC_hg19_v1_chr16_+_89160285 BC028399 AK290963 BC064609 BC072391 AK075499	84242	+	EU446890|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC047019|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AK314766|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010419|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##BC062624|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_005187|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##AB010420|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##NM_175931|CBFA2T3|863|core-binding factor, runt domain, alpha subunit 2; translocated to, 3##EU190484|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130001|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##BC130002|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001080487|PABPN1L|390748|poly(A) binding protein, nuclear 1-like (cytoplasmic)##NM_001127214|ACSF3|197322|acyl-CoA synthetase family member 3##NM_001243279|ACSF3|197322|acyl-CoA synthetase family member 3##NM_174917|ACSF3|197322|acyl-CoA synthetase family member 3##BC028399|ACSF3|197322|acyl-CoA synthetase family member 3##AK290963|ACSF3|197322|acyl-CoA synthetase family member 3##BC064609|ACSF3|197322|acyl-CoA synthetase family member 3##BC072391|ACSF3|197322|acyl-CoA synthetase family member 3##AK075499|ACSF3|197322|acyl-CoA synthetase family member 3	0.0	
chr17	18043417	18043523	reg1031186.p1	3.437	+	AF144094 NM_016239	-31451	+	TSC_hg19_v1_chr17_+_17991289 AK313362 BC062572 BC000493 NM_001388 AK297569 X80754 AK295575 DQ890768 DQ893929 BT006976	-52202	+	TSC_hg19_v1_chr17_+_17942750 BC041829 NM_024052 AK315083 AK074284 AK127580 BC000636	-100663	+	TSC_hg19_v1_chr17_+_18086815 NM_017758	43369	+	TSC_hg19_v1_chr17_+_18087141 AK301107 BC062339	43719	+	TSC_hg19_v1_chr17_+_18128931 BC028037 NM_004140 BC151838 BC028214 X86371	85468	+	AF144094|MYO15A|51168|myosin XVA##NM_016239|MYO15A|51168|myosin XVA##AK313362|DRG2|1819|developmentally regulated GTP binding protein 2##BC062572|DRG2|1819|developmentally regulated GTP binding protein 2##BC000493|DRG2|1819|developmentally regulated GTP binding protein 2##NM_001388|DRG2|1819|developmentally regulated GTP binding protein 2##AK297569|DRG2|1819|developmentally regulated GTP binding protein 2##X80754|DRG2|1819|developmentally regulated GTP binding protein 2##AK295575|DRG2|1819|developmentally regulated GTP binding protein 2##DQ890768|DRG2|1819|developmentally regulated GTP binding protein 2##DQ893929|DRG2|1819|developmentally regulated GTP binding protein 2##BT006976|DRG2|1819|developmentally regulated GTP binding protein 2##BC041829|C17orf39|79018|chromosome 17 open reading frame 39##NM_024052|C17orf39|79018|chromosome 17 open reading frame 39##AK315083|C17orf39|79018|chromosome 17 open reading frame 39##AK074284|C17orf39|79018|chromosome 17 open reading frame 39##AK127580|C17orf39|79018|chromosome 17 open reading frame 39##BC000636|C17orf39|79018|chromosome 17 open reading frame 39##NM_017758|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##AK301107|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##BC062339|ALKBH5|54890|alkB, alkylation repair homolog 5 (E. coli)##BC028037|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##NM_004140|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##BC151838|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##BC028214|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)##X86371|LLGL1|3996|lethal giant larvae homolog 1 (Drosophila)	0.980295	CTCF.p2:-40:0.980
chr18	51675708	51675775	reg1044456.p2	3.437	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-1808628	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-1809200	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-2951701	-	TSC_hg19_v1_chr18_-_51690988 AL110266	15251	-	AF072246 TSC_hg19_v1_chr18_-_51750614	74796	-	TSC_hg19_v1_chr18_-_51750997 BC032638	75224	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	0.0	
chr19	49482367	49482484	reg1025683.p2	3.437	+	TSC_hg19_v1_chr19_+_49468656 DQ892980 DQ896228 EU831925 EU832020 AB528331 CU678630 AY466472 CR456715	-13715	+	Y09188 BC018990 BC002991 TSC_hg19_v1_chr19_+_49468604 M11147	-13822	+	TSC_hg19_v1_chr19_+_49468565 AK026534 AK130191 AK131048 AK131050 AK307065 AK311773 AY207005 BC008439 BC008441 BC013928 BC016346 BC016354 BC016715 BC021670 BC058820 BC062708 NM_000146 BX571748 BC067772 AK130205 AK131053 BC004245	-13859	+	CU675761 CU678426 AB590881 TSC_hg19_v1_chr19_-_49496515 U32573	14017	-	TSC_hg19_v1_chr19_-_49496541 J04501 BC007688 BC002617	14109	-	TSC_hg19_v1_chr19_-_49496564 AK223579 AK291672 AK294349 AK300369 AK302738 AK303712	14139	-	DQ892980|FTL|2512|ferritin, light polypeptide##DQ896228|FTL|2512|ferritin, light polypeptide##EU831925|FTL|2512|ferritin, light polypeptide##EU832020|FTL|2512|ferritin, light polypeptide##AY466472|FTL|2512|ferritin, light polypeptide##CR456715|FTL|2512|ferritin, light polypeptide##Y09188|FTL|2512|ferritin, light polypeptide##BC018990|FTL|2512|ferritin, light polypeptide##BC002991|FTL|2512|ferritin, light polypeptide##M11147|FTL|2512|ferritin, light polypeptide##AK026534|FTL|2512|ferritin, light polypeptide##AK130191|FTL|2512|ferritin, light polypeptide##AK131048|FTL|2512|ferritin, light polypeptide##AK131050|FTL|2512|ferritin, light polypeptide##AK307065|FTL|2512|ferritin, light polypeptide##AK311773|FTL|2512|ferritin, light polypeptide##AY207005|FTL|2512|ferritin, light polypeptide##BC008439|FTL|2512|ferritin, light polypeptide##BC008441|FTL|2512|ferritin, light polypeptide##BC013928|FTL|2512|ferritin, light polypeptide##BC016346|FTL|2512|ferritin, light polypeptide##BC016354|FTL|2512|ferritin, light polypeptide##BC016715|FTL|2512|ferritin, light polypeptide##BC021670|FTL|2512|ferritin, light polypeptide##BC058820|FTL|2512|ferritin, light polypeptide##BC062708|FTL|2512|ferritin, light polypeptide##NM_000146|FTL|2512|ferritin, light polypeptide##BX571748|FTL|2512|ferritin, light polypeptide##BC067772|FTL|2512|ferritin, light polypeptide##AK130205|FTL|2512|ferritin, light polypeptide##AK131053|FTL|2512|ferritin, light polypeptide##BC004245|FTL|2512|ferritin, light polypeptide##U32573|GYS1|2997|glycogen synthase 1 (muscle)##J04501|GYS1|2997|glycogen synthase 1 (muscle)##BC007688|GYS1|2997|glycogen synthase 1 (muscle)##BC002617|GYS1|2997|glycogen synthase 1 (muscle)##AK223579|GYS1|2997|glycogen synthase 1 (muscle)##AK291672|GYS1|2997|glycogen synthase 1 (muscle)##AK294349|GYS1|2997|glycogen synthase 1 (muscle)##AK300369|GYS1|2997|glycogen synthase 1 (muscle)##AK302738|GYS1|2997|glycogen synthase 1 (muscle)##AK303712|GYS1|2997|glycogen synthase 1 (muscle)	0.97772	CTCF.p2:-17:0.978
chr21	34312757	34312862	reg1013571.p1	3.437	+	BC069689 BC069709 BC069766 BC069779 AF231922 AK290983 DQ656042 NM_001162495 NM_001162496 NM_019596	-126812	-	AK096601 BC034794 TSC_hg19_v1_chr21_+_34144471 BC117397 BC117399	-168346	+	AY033903 AY033904 AY033905 AY033906 TSC_hg19_v1_chr21_-_34144044 AJ279080 AJ279081 AK309404 BC030539 BC084542 BC062992 NM_013329 NM_016631	-168735	-	TSC_hg19_v1_chr21_+_34398242 NM_005806 AK091462 BC047511 BC036245 BC034681 BC036275 AF221520	85442	+	TSC_hg19_v1_chr21_+_34442446 BC033290 NM_138983 AL834450 AB209791	129643	+	TSC_hg19_v1_chr21_+_34442554 AB463154 DQ896828 BC026989	129752	+	BC069689|C21orf62|56245|chromosome 21 open reading frame 62##BC069709|C21orf62|56245|chromosome 21 open reading frame 62##BC069766|C21orf62|56245|chromosome 21 open reading frame 62##BC069779|C21orf62|56245|chromosome 21 open reading frame 62##AF231922|C21orf62|56245|chromosome 21 open reading frame 62##AK290983|C21orf62|56245|chromosome 21 open reading frame 62##DQ656042|C21orf62|56245|chromosome 21 open reading frame 62##NM_001162495|C21orf62|56245|chromosome 21 open reading frame 62##NM_001162496|C21orf62|56245|chromosome 21 open reading frame 62##NM_019596|C21orf62|56245|chromosome 21 open reading frame 62##AK096601|C21orf49|54067|chromosome 21 open reading frame 49##BC034794|C21orf49|54067|chromosome 21 open reading frame 49##BC117397|C21orf49|54067|chromosome 21 open reading frame 49##BC117399|C21orf49|54067|chromosome 21 open reading frame 49##AY033903|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033904|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033905|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AY033906|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AJ279080|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AJ279081|GCFC1|94104|GC-rich sequence DNA-binding factor 1##AK309404|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC030539|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC084542|GCFC1|94104|GC-rich sequence DNA-binding factor 1##BC062992|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_013329|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_016631|GCFC1|94104|GC-rich sequence DNA-binding factor 1##NM_005806|OLIG2|10215|oligodendrocyte lineage transcription factor 2##AK091462|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC047511|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC036245|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC034681|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC036275|OLIG2|10215|oligodendrocyte lineage transcription factor 2##AF221520|OLIG2|10215|oligodendrocyte lineage transcription factor 2##BC033290|OLIG1|116448|oligodendrocyte transcription factor 1##NM_138983|OLIG1|116448|oligodendrocyte transcription factor 1##AL834450|OLIG1|116448|oligodendrocyte transcription factor 1##AB209791|OLIG1|116448|oligodendrocyte transcription factor 1##DQ896828|OLIG1|116448|oligodendrocyte transcription factor 1##BC026989|OLIG1|116448|oligodendrocyte transcription factor 1	0.0	
chr22	26145247	26145318	reg1034700.p1	3.437	+	TSC_hg19_v1_chr22_+_26138168 AY077700	-7098	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	-7162	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-184336	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	420155	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	420215	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	420381	+	AY077700|MYO18B|84700|myosin XVIIIB##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.0	
chr22	50673704	50673789	reg1042849.p1	3.437	+	CR456464 BC001099 CU013014 CU013302 TSC_hg19_v1_chr22_+_50640050	-33776	+	TSC_hg19_v1_chr22_+_50639439 AY324823 NM_031454 BC110866 BC051758	-34308	+	TSC_hg19_v1_chr22_+_50624353 BC012445 AL449244 NM_025204 AK292050 AY203945	-49365	+	AB051456 TSC_hg19_v1_chr22_-_50682891	9100	-	TSC_hg19_v1_chr22_-_50682948 BC144488 BC144489 BC150613 AF272887	9226	-	TSC_hg19_v1_chr22_-_50683439 BC151209 NM_020461 AL832617 AK310419	9684	-	CR456464|SELO|83642|selenoprotein O##BC001099|SELO|83642|selenoprotein O##AY324823|SELO|83642|selenoprotein O##NM_031454|SELO|83642|selenoprotein O##BC110866|SELO|83642|selenoprotein O##BC051758|SELO|83642|selenoprotein O##BC012445|TRABD|80305|TraB domain containing##AL449244|TRABD|80305|TraB domain containing##NM_025204|TRABD|80305|TraB domain containing##AK292050|TRABD|80305|TraB domain containing##AY203945|TRABD|80305|TraB domain containing##AB051456|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC144488|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC144489|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC150613|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AF272887|TUBGCP6|85378|tubulin, gamma complex associated protein 6##BC151209|TUBGCP6|85378|tubulin, gamma complex associated protein 6##NM_020461|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AL832617|TUBGCP6|85378|tubulin, gamma complex associated protein 6##AK310419|TUBGCP6|85378|tubulin, gamma complex associated protein 6	0.0	
chr3	32474610	32474742	reg1043011.p2	3.437	+	TSC_hg19_v1_chr3_+_32433370 BC010116 AY174113 DQ132881 AK308878	-41273	+	TSC_hg19_v1_chr3_+_32433162 AF479263 NM_138410 NM_181472 AL832450	-41507	+	TSC_hg19_v1_chr3_+_32280215 BC041390	-194457	+	CR457231 TSC_hg19_v1_chr3_-_32544290	69596	-	TSC_hg19_v1_chr3_-_32544335 AK000403	69657	-	BC002797 TSC_hg19_v1_chr3_-_32544365 NM_017801	69704	-	BC010116|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AY174113|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##DQ132881|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AK308878|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AF479263|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_138410|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##NM_181472|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##AL832450|CMTM7|112616|CKLF-like MARVEL transmembrane domain containing 7##BC041390|CMTM8|152189|CKLF-like MARVEL transmembrane domain containing 8##CR457231|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##AK000403|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##BC002797|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6##NM_017801|CMTM6|54918|CKLF-like MARVEL transmembrane domain containing 6	0.0	
chr5	70955234	70955349	reg1044003.p1	3.437	+	TSC_hg19_v1_chr5_+_70944968 AK025591	-10304	+	AF261884 TSC_hg19_v1_chr5_+_70883182 BC065027 CU688004	-72076	+	TSC_hg19_v1_chr5_+_70883166 AB050049 AF301000 AK310194	-72140	+	NM_004291 BC029882 U16826 CR542216 CU688778 EU831800 EU831877	59763	+	TSC_hg19_v1_chr5_+_71403301 BC017240 NM_005909 BC025240 BC139918 BC150196 BC046114 AK096273 AK308147 BX647077 BC039822 BC108733 BC032516 BC073993 BC056145 BC063669 BC094834 AB463119	447988	+	TSC_hg19_v1_chr5_+_71502701 AK125194	547472	+	AK025591|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AF261884|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##BC065027|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AB050049|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AF301000|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##AK310194|MCCC2|64087|methylcrotonoyl-CoA carboxylase 2 (beta)##NM_004291|CARTPT|9607|CART prepropeptide##BC029882|CARTPT|9607|CART prepropeptide##U16826|CARTPT|9607|CART prepropeptide##CR542216|CARTPT|9607|CART prepropeptide##EU831800|CARTPT|9607|CART prepropeptide##EU831877|CARTPT|9607|CART prepropeptide##BC017240|MAP1B|4131|microtubule-associated protein 1B##NM_005909|MAP1B|4131|microtubule-associated protein 1B##BC025240|MAP1B|4131|microtubule-associated protein 1B##BC139918|MAP1B|4131|microtubule-associated protein 1B##BC150196|MAP1B|4131|microtubule-associated protein 1B##BC046114|MAP1B|4131|microtubule-associated protein 1B##AK096273|MAP1B|4131|microtubule-associated protein 1B##AK308147|MAP1B|4131|microtubule-associated protein 1B##BX647077|MAP1B|4131|microtubule-associated protein 1B##BC039822|MAP1B|4131|microtubule-associated protein 1B##BC108733|MAP1B|4131|microtubule-associated protein 1B##BC032516|MAP1B|4131|microtubule-associated protein 1B##BC073993|MAP1B|4131|microtubule-associated protein 1B##BC056145|MAP1B|4131|microtubule-associated protein 1B##BC063669|MAP1B|4131|microtubule-associated protein 1B##BC094834|MAP1B|4131|microtubule-associated protein 1B##AK125194|MAP1B|4131|microtubule-associated protein 1B	0.933747	CTCF.p2:-9:0.934
chr9	10232511	10232636	reg1035738.p1	3.437	+	TSC_hg19_v1_chr9_+_8858136 AK094342	-1374440	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-1498654	-	TSC_hg19_v1_chr9_+_8713275 AY779046	-1519281	+	BC028038 NM_002839	380149	-	NM_000550 X51420 BC052608	2460852	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	2542443	+	BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##AY779046|RPL18A|6142|ribosomal protein L18a##BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150	0.758697	CTCF.p2:-15:0.759
chr9	130783199	130783301	reg1035638.p1	3.437	+	TSC_hg19_v1_chr9_-_130742813 AK058004 NM_001035254	-40441	-	BC137087 BC137088 BC047949 NM_203305 BC142952	-70319	-	BC015233 NM_003863	-82488	-	AK122729 NM_197956	46348	-	TSC_hg19_v1_chr9_+_130830492 AK290991 NM_001006641	47233	+	AJ619990 TSC_hg19_v1_chr9_+_130830643	47369	+	AK058004|FAM102A|399665|family with sequence similarity 102, member A##NM_001035254|FAM102A|399665|family with sequence similarity 102, member A##BC137087|FAM102A|399665|family with sequence similarity 102, member A##BC137088|FAM102A|399665|family with sequence similarity 102, member A##BC047949|FAM102A|399665|family with sequence similarity 102, member A##NM_203305|FAM102A|399665|family with sequence similarity 102, member A##BC142952|FAM102A|399665|family with sequence similarity 102, member A##BC015233|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##NM_003863|DPM2|8818|dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit##AK122729|NAIF1|203245|nuclear apoptosis inducing factor 1##NM_197956|NAIF1|203245|nuclear apoptosis inducing factor 1##AK290991|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##NM_001006641|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25##AJ619990|SLC25A25|114789|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25	0.182947	
chr9	77643164	77643307	reg1026897.p1	3.437	+	TSC_hg19_v1_chr9_-_77643210 AK299691	-25	-	CU689816 EU832520 EU832602 TSC_hg19_v1_chr9_-_77643174	-70	-	TSC_hg19_v1_chr9_-_77643032 BX647386	-165	-	TSC_hg19_v1_chr9_-_77643332 BC034033 NM_152420	99	-	BC001366 TSC_hg19_v1_chr9_-_77703070 AK000566 AK097144 AK023413 BC036804 NM_001127603 NM_017881 BC026243	59853	-	TSC_hg19_v1_chr9_+_77703406 NM_012383	60165	+	AK299691|C9orf41|138199|chromosome 9 open reading frame 41##EU832520|C9orf41|138199|chromosome 9 open reading frame 41##EU832602|C9orf41|138199|chromosome 9 open reading frame 41##BX647386|C9orf41|138199|chromosome 9 open reading frame 41##BC034033|C9orf41|138199|chromosome 9 open reading frame 41##NM_152420|C9orf41|138199|chromosome 9 open reading frame 41##BC001366|C9orf95|54981|chromosome 9 open reading frame 95##AK000566|C9orf95|54981|chromosome 9 open reading frame 95##AK097144|C9orf95|54981|chromosome 9 open reading frame 95##AK023413|C9orf95|54981|chromosome 9 open reading frame 95##BC036804|C9orf95|54981|chromosome 9 open reading frame 95##NM_001127603|C9orf95|54981|chromosome 9 open reading frame 95##NM_017881|C9orf95|54981|chromosome 9 open reading frame 95##BC026243|C9orf95|54981|chromosome 9 open reading frame 95##NM_012383|OSTF1|26578|osteoclast stimulating factor 1	0.202925	
chr1	116915448	116915622	reg1029070.p1	3.436	+	AK096035 NM_152367	-261160	+	TSC_hg19_v1_chr1_+_116519194 BC070033 AY358258 AY145501 CU693234 DQ892367 DQ895576	-396306	+	NM_018420 BC026358 TSC_hg19_v1_chr1_+_116519161	-396392	+	NM_000701 TSC_hg19_v1_chr1_+_116915824	276	+	BC003077 TSC_hg19_v1_chr1_+_116915881 BC050359	347	+	TSC_hg19_v1_chr1_+_116915952 AK314777	413	+	AK096035|MAB21L3|126868|mab-21-like 3 (C. elegans)##NM_152367|MAB21L3|126868|mab-21-like 3 (C. elegans)##BC070033|SLC22A15|55356|solute carrier family 22, member 15##AY358258|SLC22A15|55356|solute carrier family 22, member 15##AY145501|SLC22A15|55356|solute carrier family 22, member 15##DQ892367|SLC22A15|55356|solute carrier family 22, member 15##DQ895576|SLC22A15|55356|solute carrier family 22, member 15##NM_018420|SLC22A15|55356|solute carrier family 22, member 15##BC026358|SLC22A15|55356|solute carrier family 22, member 15##NM_000701|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC003077|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BC050359|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##AK314777|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide	0.0	
chr13	21050038	21050135	reg1032519.p1	3.436	+	NM_001110219 NM_001110220 NM_001110221	-243553	-	NM_006783	-244715	-	TSC_hg19_v1_chr13_-_20767115 AK313595 NM_004004	-282975	-	BC119660 BC119661 TSC_hg19_v1_chr13_-_21099959 AF160216 AF077049 AF087898 AK024041 BC071810 NM_015974	49887	-	NM_006531 NM_175605 U20362 TSC_hg19_v1_chr13_+_21141275 BC030776	91155	+	TSC_hg19_v1_chr13_+_21141298 AK300769 AK310223 AK308281 AK303853 BC059357	91220	+	NM_001110219|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110220|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110221|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa##AK313595|GJB2|2706|gap junction protein, beta 2, 26kDa##NM_004004|GJB2|2706|gap junction protein, beta 2, 26kDa##BC119660|CRYL1|51084|crystallin, lambda 1##BC119661|CRYL1|51084|crystallin, lambda 1##AF160216|CRYL1|51084|crystallin, lambda 1##AF077049|CRYL1|51084|crystallin, lambda 1##AF087898|CRYL1|51084|crystallin, lambda 1##AK024041|CRYL1|51084|crystallin, lambda 1##BC071810|CRYL1|51084|crystallin, lambda 1##NM_015974|CRYL1|51084|crystallin, lambda 1##NM_006531|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##NM_175605|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##U20362|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC030776|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK300769|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK310223|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK308281|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK303853|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC059357|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)	0.0	
chr13	29098397	29098473	reg1033668.p2	3.436	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	-29191	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	-385769	+	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	-423748	-	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	134773	+	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	134859	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	194620	-	BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3	0.0	
chr13	80830810	80830908	reg1040704.p2	3.436	+	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-775304	+	TSC_hg19_v1_chr13_+_80055411 AK297197 AK001723	-775437	+	TSC_hg19_v1_chr13_+_80055257 NM_001161407 NM_019080 AB097019 AB097028 AB097029	-775588	+	BC004205 TSC_hg19_v1_chr13_-_80913114	82183	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	84205	-	TSC_hg19_v1_chr13_-_84456424 BC051738	3625566	-	AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##AK297197|NDFIP2|54602|Nedd4 family interacting protein 2##AK001723|NDFIP2|54602|Nedd4 family interacting protein 2##NM_001161407|NDFIP2|54602|Nedd4 family interacting protein 2##NM_019080|NDFIP2|54602|Nedd4 family interacting protein 2##AB097019|NDFIP2|54602|Nedd4 family interacting protein 2##AB097028|NDFIP2|54602|Nedd4 family interacting protein 2##AB097029|NDFIP2|54602|Nedd4 family interacting protein 2##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1	0.0	
chr16	75268083	75268224	reg1000402.p2	3.436	+	TSC_hg19_v1_chr16_+_75252885 NM_001906	-15267	+	TSC_hg19_v1_chr16_-_75241062 AK124403 AK291822 AK225933 NM_001025200	-27071	-	AK296560 TSC_hg19_v1_chr16_+_75182389 AK291372 NM_153688 AK094761 AK308134 BC064604	-85719	+	TSC_hg19_v1_chr16_-_75272524 AK124844	4387	-	NM_001170721	4826	-	AK294513 NM_001170719	14027	-	NM_001906|CTRB1|1504|chymotrypsinogen B1##AK124403|CTRB1|1504|chymotrypsinogen B1##AK291822|CTRB2|440387|chymotrypsinogen B2##AK225933|CTRB2|440387|chymotrypsinogen B2##NM_001025200|CTRB2|440387|chymotrypsinogen B2##AK296560|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK291372|ZFP1|162239|zinc finger protein 1 homolog (mouse)##NM_153688|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK094761|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK308134|ZFP1|162239|zinc finger protein 1 homolog (mouse)##BC064604|ZFP1|162239|zinc finger protein 1 homolog (mouse)##AK124844|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170721|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK294513|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170719|BCAR1|9564|breast cancer anti-estrogen resistance 1	0.0	
chr17	40336280	40336376	reg1046072.p1	3.436	+	TSC_hg19_v1_chr17_-_40333301 AB022698 NM_012285	-3053	-	TSC_hg19_v1_chr17_-_40307015 BC114439 BC106039 NM_001252039 NM_004583 NM_201434	-29290	-	TSC_hg19_v1_chr17_-_40307008 AK310234	-29330	-	AB463761 AF041240 NM_001524	1098	-	AK298933 TSC_hg19_v1_chr17_-_40346487 BC022784 AK122777 AK123075 AK307058 BC011056 AK075277 NM_001142622 NM_001142623 NM_032484	10160	-	AK308163 TSC_hg19_v1_chr17_-_40428385	92022	-	AB022698|KCNH4|23415|potassium voltage-gated channel, subfamily H (eag-related), member 4##NM_012285|KCNH4|23415|potassium voltage-gated channel, subfamily H (eag-related), member 4##BC114439|RAB5C|5878|RAB5C, member RAS oncogene family##BC106039|RAB5C|5878|RAB5C, member RAS oncogene family##NM_001252039|RAB5C|5878|RAB5C, member RAS oncogene family##NM_004583|RAB5C|5878|RAB5C, member RAS oncogene family##NM_201434|RAB5C|5878|RAB5C, member RAS oncogene family##AK310234|RAB5C|5878|RAB5C, member RAS oncogene family##AF041240|HCRT|3060|hypocretin (orexin) neuropeptide precursor##NM_001524|HCRT|3060|hypocretin (orexin) neuropeptide precursor##AK298933|GHDC|84514|GH3 domain containing##BC022784|GHDC|84514|GH3 domain containing##AK122777|GHDC|84514|GH3 domain containing##AK123075|GHDC|84514|GH3 domain containing##AK307058|GHDC|84514|GH3 domain containing##BC011056|GHDC|84514|GH3 domain containing##AK075277|GHDC|84514|GH3 domain containing##NM_001142622|GHDC|84514|GH3 domain containing##NM_001142623|GHDC|84514|GH3 domain containing##NM_032484|GHDC|84514|GH3 domain containing##AK308163|STAT5B|6777|signal transducer and activator of transcription 5B	0.898103	CTCF.p2:-10:0.898
chr20	47400397	47400545	reg1038340.p1	3.436	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-985153	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-985719	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1269787	+	AB037836 TSC_hg19_v1_chr20_-_47444291	43815	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	43968	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	137847	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr3	107574685	107574788	reg1035912.p2	3.436	+	NM_001142568 NM_020235 AF283775 AF454941 TSC_hg19_v1_chr3_+_107241834 AF161457 AK314434 AK057010 AK291757 AF276949 BC131718	-332887	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	-478426	+	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	-615144	+	AB590342 BT006907 DQ890756 DQ891811 DQ893920 TSC_hg19_v1_chr3_-_107809906 BC010016 BC012884 X69398 BC037306 AK289813 Z25521 NM_001777 NM_198793	235137	-	AB014762 AB528382 CR457251 CU680102 DQ893050 DQ896298 TSC_hg19_v1_chr3_-_107941272 AK298854 AF139576 AK001009 BC011899 NM_018010	366556	-	AK315109 AK296644 TSC_hg19_v1_chr3_+_108015400 AK000692	440665	+	NM_001142568|BBX|56987|bobby sox homolog (Drosophila)##NM_020235|BBX|56987|bobby sox homolog (Drosophila)##AF283775|BBX|56987|bobby sox homolog (Drosophila)##AF454941|BBX|56987|bobby sox homolog (Drosophila)##AF161457|BBX|56987|bobby sox homolog (Drosophila)##AK314434|BBX|56987|bobby sox homolog (Drosophila)##AK057010|BBX|56987|bobby sox homolog (Drosophila)##AK291757|BBX|56987|bobby sox homolog (Drosophila)##AF276949|BBX|56987|bobby sox homolog (Drosophila)##BC131718|BBX|56987|bobby sox homolog (Drosophila)##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##BT006907|CD47|961|CD47 molecule##DQ890756|CD47|961|CD47 molecule##DQ891811|CD47|961|CD47 molecule##DQ893920|CD47|961|CD47 molecule##BC010016|CD47|961|CD47 molecule##BC012884|CD47|961|CD47 molecule##X69398|CD47|961|CD47 molecule##BC037306|CD47|961|CD47 molecule##AK289813|CD47|961|CD47 molecule##Z25521|CD47|961|CD47 molecule##NM_001777|CD47|961|CD47 molecule##NM_198793|CD47|961|CD47 molecule##AB014762|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##CR457251|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ893050|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##DQ896298|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK298854|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AF139576|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK001009|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##BC011899|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##NM_018010|IFT57|55081|intraflagellar transport 57 homolog (Chlamydomonas)##AK315109|HHLA2|11148|HERV-H LTR-associating 2##AK296644|HHLA2|11148|HERV-H LTR-associating 2##AK000692|HHLA2|11148|HERV-H LTR-associating 2	0.907615	CTCF.p2:-4:0.908
chr5	149509795	149509949	reg1003416.p2	3.436	+	NM_005211 X03663	-16938	-	TSC_hg19_v1_chr5_-_149466188 BC047521 AK304491 M25786	-43639	-	TSC_hg19_v1_chr5_-_149466131 AB208819	-43726	-	M21616 TSC_hg19_v1_chr5_-_149535251 AK293093	25332	-	J03278 M30493 TSC_hg19_v1_chr5_-_149535344	25463	-	BC032224 AB209657 NM_002609 TSC_hg19_v1_chr5_-_149535428	25552	-	NM_005211|CSF1R|1436|colony stimulating factor 1 receptor##X03663|CSF1R|1436|colony stimulating factor 1 receptor##BC047521|CSF1R|1436|colony stimulating factor 1 receptor##AK304491|CSF1R|1436|colony stimulating factor 1 receptor##M25786|CSF1R|1436|colony stimulating factor 1 receptor##AB208819|CSF1R|1436|colony stimulating factor 1 receptor##M21616|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AK293093|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##J03278|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##M30493|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##BC032224|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##AB209657|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide##NM_002609|PDGFRB|5159|platelet-derived growth factor receptor, beta polypeptide	0.0	
chr8	59053631	59053744	reg1040216.p1	3.436	+	TSC_hg19_v1_chr8_+_58907119 AK092221 NM_147189	-146530	+	TSC_hg19_v1_chr8_-_57906427 AK000428 NM_017813	-1147261	-	BC067814 TSC_hg19_v1_chr8_-_57906402	-1147285	-	BC113645 NM_001077619 TSC_hg19_v1_chr8_+_59323919 AK126300 HQ258392 AL831990 AL833075 BX647876	270198	+	X56088 M93133 BC101777 BC112184 NM_000780	359020	-	NM_001007067 NM_001007068 NM_001007069 NM_001007070 NM_005625 TSC_hg19_v1_chr8_+_59465774 AF000652	412065	+	AK092221|FAM110B|90362|family with sequence similarity 110, member B##NM_147189|FAM110B|90362|family with sequence similarity 110, member B##AK000428|IMPAD1|54928|inositol monophosphatase domain containing 1##NM_017813|IMPAD1|54928|inositol monophosphatase domain containing 1##BC067814|IMPAD1|54928|inositol monophosphatase domain containing 1##BC113645|UBXN2B|137886|UBX domain protein 2B##NM_001077619|UBXN2B|137886|UBX domain protein 2B##AK126300|UBXN2B|137886|UBX domain protein 2B##HQ258392|UBXN2B|137886|UBX domain protein 2B##AL831990|UBXN2B|137886|UBX domain protein 2B##AL833075|UBXN2B|137886|UBX domain protein 2B##BX647876|UBXN2B|137886|UBX domain protein 2B##X56088|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##M93133|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC101777|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##BC112184|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_000780|CYP7A1|1581|cytochrome P450, family 7, subfamily A, polypeptide 1##NM_001007067|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007068|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007069|SDCBP|6386|syndecan binding protein (syntenin)##NM_001007070|SDCBP|6386|syndecan binding protein (syntenin)##NM_005625|SDCBP|6386|syndecan binding protein (syntenin)##AF000652|SDCBP|6386|syndecan binding protein (syntenin)	0.0	
chr1	107993434	107993554	reg1033383.p1	3.435	+	AB023193 TSC_hg19_v1_chr1_+_107683657	-309890	+	BX538348 NM_001113226 NM_001113228 AK296533 BC030220 NM_014917 TSC_hg19_v1_chr1_+_107682856	-310752	+	NM_018137 TSC_hg19_v1_chr1_+_107599330 BC073866 AK226009 AK295541 AK297898 AY043278 BC013866 AK001421 BC002729 BC063446	-394129	+	TSC_hg19_v1_chr1_-_108231122 AF035442 AK300474 AK304088 AK316295 NM_001079874	237630	-	AK295166 AB527273 AF067817 AF118887 NM_006113 BC143969 TSC_hg19_v1_chr1_-_108507725	514106	-	AJ619961 NM_213651 AK292567	741902	-	AB023193|NTNG1|22854|netrin G1##BX538348|NTNG1|22854|netrin G1##NM_001113226|NTNG1|22854|netrin G1##NM_001113228|NTNG1|22854|netrin G1##AK296533|NTNG1|22854|netrin G1##BC030220|NTNG1|22854|netrin G1##NM_014917|NTNG1|22854|netrin G1##NM_018137|PRMT6|55170|protein arginine methyltransferase 6##BC073866|PRMT6|55170|protein arginine methyltransferase 6##AK226009|PRMT6|55170|protein arginine methyltransferase 6##AK295541|PRMT6|55170|protein arginine methyltransferase 6##AK297898|PRMT6|55170|protein arginine methyltransferase 6##AY043278|PRMT6|55170|protein arginine methyltransferase 6##BC013866|PRMT6|55170|protein arginine methyltransferase 6##AK001421|PRMT6|55170|protein arginine methyltransferase 6##BC002729|PRMT6|55170|protein arginine methyltransferase 6##BC063446|PRMT6|55170|protein arginine methyltransferase 6##AF035442|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK300474|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK304088|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK316295|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_001079874|VAV3|10451|vav 3 guanine nucleotide exchange factor##AK295166|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF067817|VAV3|10451|vav 3 guanine nucleotide exchange factor##AF118887|VAV3|10451|vav 3 guanine nucleotide exchange factor##NM_006113|VAV3|10451|vav 3 guanine nucleotide exchange factor##BC143969|VAV3|10451|vav 3 guanine nucleotide exchange factor##AJ619961|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##NM_213651|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24##AK292567|SLC25A24|29957|solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24	0.0	
chr1	182004658	182004776	reg1036466.p2	3.435	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	-552017	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-946852	+	NM_016545	-947080	+	BC137223 BC137224 AK128654 NM_001009992	26080	-	TSC_hg19_v1_chr1_-_182354649 AK301600	349965	-	TSC_hg19_v1_chr1_-_182357758 BC127883	353046	-	NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase##BC127883|GLUL|2752|glutamate-ammonia ligase	0.102229	
chr1	207006562	207006680	reg1043703.p1	3.435	+	AF453946 NM_013371	-4400	+	AY040367 NM_153758 AB463800	-34395	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-60742	-	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	32554	+	NM_001185156 NM_001185157 NM_001185158 NM_006850 AY641440 AY641441 U16261 BC009681	64179	+	BT006797 CU675387 DQ890699 HM480394 AF057557 NM_001193338 GQ160900 GQ160901 TSC_hg19_v1_chr1_-_207095293 AK292007 AK297053 AK301187 AK316336 BC006401 NM_001142473 NM_005449	88666	-	AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20##NM_001185156|IL24|11009|interleukin 24##NM_001185157|IL24|11009|interleukin 24##NM_001185158|IL24|11009|interleukin 24##NM_006850|IL24|11009|interleukin 24##AY641440|IL24|11009|interleukin 24##AY641441|IL24|11009|interleukin 24##U16261|IL24|11009|interleukin 24##BC009681|IL24|11009|interleukin 24##BT006797|FAIM3|9214|Fas apoptotic inhibitory molecule 3##DQ890699|FAIM3|9214|Fas apoptotic inhibitory molecule 3##HM480394|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AF057557|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001193338|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160900|FAIM3|9214|Fas apoptotic inhibitory molecule 3##GQ160901|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK292007|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK297053|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK301187|FAIM3|9214|Fas apoptotic inhibitory molecule 3##AK316336|FAIM3|9214|Fas apoptotic inhibitory molecule 3##BC006401|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_001142473|FAIM3|9214|Fas apoptotic inhibitory molecule 3##NM_005449|FAIM3|9214|Fas apoptotic inhibitory molecule 3	0.0	
chr15	80061767	80061936	reg1009973.p2	3.435	+	AB028947 NM_015206 BC152466	-336992	+	TSC_hg19_v1_chr15_+_79603557 AJ132270 CR457384	-458284	+	AK304148 TSC_hg19_v1_chr15_+_79603498 AK075529	-458348	+	BC012417 AL110101 AB527712 CU676480 TSC_hg19_v1_chr15_-_80189345 L38928 BC019921 NM_006441	127529	-	NM_001199758	127775	-	AL109714 NM_001100879	145746	-	AB028947|KIAA1024|23251|KIAA1024##NM_015206|KIAA1024|23251|KIAA1024##BC152466|KIAA1024|23251|KIAA1024##AJ132270|TMED3|23423|transmembrane emp24 protein transport domain containing 3##CR457384|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK304148|TMED3|23423|transmembrane emp24 protein transport domain containing 3##AK075529|TMED3|23423|transmembrane emp24 protein transport domain containing 3##BC012417|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL110101|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##L38928|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##BC019921|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_006441|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##NM_001199758|MTHFS|10588|5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)##AL109714|ST20|400410|suppressor of tumorigenicity 20##NM_001100879|ST20|400410|suppressor of tumorigenicity 20	0.0	
chr17	55184025	55184148	reg1038080.p2	3.435	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-20943	+	TSC_hg19_v1_chr17_+_55162639 NM_003488 BC000729 X97335	-21472	+	NM_021626 TSC_hg19_v1_chr17_+_55055513 AY358559 AF282618 AK027373 BC010078 AK298161 CU687218 BC072405 AF113214	-128582	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	149887	+	AK093888 AX748353 NM_170721	150287	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	743318	-	NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_003488|AKAP1|8165|A kinase (PRKA) anchor protein 1##BC000729|AKAP1|8165|A kinase (PRKA) anchor protein 1##X97335|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_021626|SCPEP1|59342|serine carboxypeptidase 1##AY358559|SCPEP1|59342|serine carboxypeptidase 1##AF282618|SCPEP1|59342|serine carboxypeptidase 1##AK027373|SCPEP1|59342|serine carboxypeptidase 1##BC010078|SCPEP1|59342|serine carboxypeptidase 1##AK298161|SCPEP1|59342|serine carboxypeptidase 1##BC072405|SCPEP1|59342|serine carboxypeptidase 1##AF113214|SCPEP1|59342|serine carboxypeptidase 1##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23	0.840537	CTCF.p2:17:0.841
chr19	11316791	11316965	reg1031098.p2	3.435	+	TSC_hg19_v1_chr19_-_11308465 AK000011 AK225038	-8416	-	TSC_hg19_v1_chr19_-_11308222 BC082762 AB284125 NM_001136191	-8620	-	AB528156 AY639929 CU687364 NM_015493	-11653	-	TSC_hg19_v1_chr19_+_11350294 NM_018687 AY358356	33418	+	AB384597 TSC_hg19_v1_chr19_-_11373144 AB037816 BC146786 BC095483 NM_020812	56260	-	AF133424 NM_012466 BC029908	89955	+	AK000011|KANK2|25959|KN motif and ankyrin repeat domains 2##AK225038|KANK2|25959|KN motif and ankyrin repeat domains 2##BC082762|KANK2|25959|KN motif and ankyrin repeat domains 2##AB284125|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_001136191|KANK2|25959|KN motif and ankyrin repeat domains 2##AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_018687|C19orf80|55908|chromosome 19 open reading frame 80##AY358356|C19orf80|55908|chromosome 19 open reading frame 80##AB037816|DOCK6|57572|dedicator of cytokinesis 6##BC146786|DOCK6|57572|dedicator of cytokinesis 6##BC095483|DOCK6|57572|dedicator of cytokinesis 6##NM_020812|DOCK6|57572|dedicator of cytokinesis 6##NM_012466|TSPAN16|26526|tetraspanin 16##BC029908|TSPAN16|26526|tetraspanin 16	0.0	
chr20	43740862	43740996	reg1015100.p2	3.435	+	BC132957 BC132959 BC144234 TSC_hg19_v1_chr20_-_43729732 AK289735 NM_002251	-11240	-	AK315238 U60207 TSC_hg19_v1_chr20_+_43595176 BC058916 BC039023 U18297	-145738	+	NM_006282 TSC_hg19_v1_chr20_+_43595152 AB209315 BC029511 AK309169 AK225326 BC005231 BC015332 BC038850 CR933633 BC093768	-145783	+	CU691668 AY038181 BC039173 AY358822 NM_145652	2838	-	AB464352 AY358678 AY037803 NM_080869	12167	-	NM_002638 BC010952 DQ892710 DQ895962 AB590207 Z18538 CR542234	62622	+	BC132957|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC132959|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##BC144234|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##AK289735|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##NM_002251|KCNS1|3787|potassium voltage-gated channel, delayed-rectifier, subfamily S, member 1##AK315238|STK4|6789|serine/threonine kinase 4##U60207|STK4|6789|serine/threonine kinase 4##BC058916|STK4|6789|serine/threonine kinase 4##BC039023|STK4|6789|serine/threonine kinase 4##U18297|STK4|6789|serine/threonine kinase 4##NM_006282|STK4|6789|serine/threonine kinase 4##AB209315|STK4|6789|serine/threonine kinase 4##BC029511|STK4|6789|serine/threonine kinase 4##AK309169|STK4|6789|serine/threonine kinase 4##AK225326|STK4|6789|serine/threonine kinase 4##BC005231|STK4|6789|serine/threonine kinase 4##BC015332|STK4|6789|serine/threonine kinase 4##BC038850|STK4|6789|serine/threonine kinase 4##CR933633|STK4|6789|serine/threonine kinase 4##BC093768|STK4|6789|serine/threonine kinase 4##AY038181|WFDC5|149708|WAP four-disulfide core domain 5##BC039173|WFDC5|149708|WAP four-disulfide core domain 5##AY358822|WFDC5|149708|WAP four-disulfide core domain 5##NM_145652|WFDC5|149708|WAP four-disulfide core domain 5##AY358678|WFDC12|128488|WAP four-disulfide core domain 12##AY037803|WFDC12|128488|WAP four-disulfide core domain 12##NM_080869|WFDC12|128488|WAP four-disulfide core domain 12##NM_002638|PI3|5266|peptidase inhibitor 3, skin-derived##BC010952|PI3|5266|peptidase inhibitor 3, skin-derived##DQ892710|PI3|5266|peptidase inhibitor 3, skin-derived##DQ895962|PI3|5266|peptidase inhibitor 3, skin-derived##Z18538|PI3|5266|peptidase inhibitor 3, skin-derived##CR542234|PI3|5266|peptidase inhibitor 3, skin-derived	0.0	
chr2	201578022	201578151	reg1004964.p2	3.435	+	AK297930 AK307738 TSC_hg19_v1_chr2_+_201474048	-104089	+	AB046692 NM_001159 TSC_hg19_v1_chr2_+_201450748 BC117179 BC117181	-127302	+	TSC_hg19_v1_chr2_+_201450590 AK301052	-127499	+	TSC_hg19_v1_chr2_+_201676291 NM_001207067 NM_014670 AL833518	98200	+	TSC_hg19_v1_chr2_+_201676632 Z70221 AK096489	98528	+	D13630 TSC_hg19_v1_chr2_+_201676645 BC001804	98560	+	AK297930|AOX1|316|aldehyde oxidase 1##AK307738|AOX1|316|aldehyde oxidase 1##AB046692|AOX1|316|aldehyde oxidase 1##NM_001159|AOX1|316|aldehyde oxidase 1##BC117179|AOX1|316|aldehyde oxidase 1##BC117181|AOX1|316|aldehyde oxidase 1##AK301052|AOX1|316|aldehyde oxidase 1##NM_001207067|BZW1|9689|basic leucine zipper and W2 domains 1##NM_014670|BZW1|9689|basic leucine zipper and W2 domains 1##AL833518|BZW1|9689|basic leucine zipper and W2 domains 1##Z70221|BZW1|9689|basic leucine zipper and W2 domains 1##AK096489|BZW1|9689|basic leucine zipper and W2 domains 1##D13630|BZW1|9689|basic leucine zipper and W2 domains 1##BC001804|BZW1|9689|basic leucine zipper and W2 domains 1	0.0	
chr2	73518014	73518120	reg1019745.p2	3.435	+	AB075820 TSC_hg19_v1_chr2_-_73496671 NM_001080410	-21391	-	BC169255 TSC_hg19_v1_chr2_-_73492731	-25346	-	TSC_hg19_v1_chr2_+_73461457 AK222478	-56603	+	AB463596 BC136252 BC143379 X60104 BC034462 TSC_hg19_v1_chr2_-_73520677 NM_001965 AK314154	2573	-	TSC_hg19_v1_chr2_+_73613119 AJ417593 AX751581 NM_015120	94991	+	AB019551 BC012626 AF187813 NM_003960	351447	-	AB075820|FBXO41|150726|F-box protein 41##NM_001080410|FBXO41|150726|F-box protein 41##BC169255|FBXO41|150726|F-box protein 41##AK222478|CCT7|10574|chaperonin containing TCP1, subunit 7 (eta)##BC136252|EGR4|1961|early growth response 4##BC143379|EGR4|1961|early growth response 4##X60104|EGR4|1961|early growth response 4##BC034462|EGR4|1961|early growth response 4##NM_001965|EGR4|1961|early growth response 4##AK314154|EGR4|1961|early growth response 4##AJ417593|ALMS1|7840|Alstrom syndrome 1##AX751581|ALMS1|7840|Alstrom syndrome 1##NM_015120|ALMS1|7840|Alstrom syndrome 1##AB019551|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##BC012626|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##AF187813|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)##NM_003960|NAT8|9027|N-acetyltransferase 8 (GCN5-related, putative)	0.0	
chr3	17071991	17072126	reg1039484.p2	3.435	+	BC036392 NM_015184	-97477	+	AB029015 NM_001144382	-145607	+	U65918 U66726 U66078 BC027595 NM_001351	-425092	-	AK310539 NM_001134381	669453	-	D86965 NM_014744	710340	-	TSC_hg19_v1_chr3_-_17784106 NM_001134380	712109	-	BC036392|PLCL2|23228|phospholipase C-like 2##NM_015184|PLCL2|23228|phospholipase C-like 2##AB029015|PLCL2|23228|phospholipase C-like 2##NM_001144382|PLCL2|23228|phospholipase C-like 2##U65918|DAZL|1618|deleted in azoospermia-like##U66726|DAZL|1618|deleted in azoospermia-like##U66078|DAZL|1618|deleted in azoospermia-like##BC027595|DAZL|1618|deleted in azoospermia-like##NM_001351|DAZL|1618|deleted in azoospermia-like##AK310539|TBC1D5|9779|TBC1 domain family, member 5##NM_001134381|TBC1D5|9779|TBC1 domain family, member 5##D86965|TBC1D5|9779|TBC1 domain family, member 5##NM_014744|TBC1D5|9779|TBC1 domain family, member 5##NM_001134380|TBC1D5|9779|TBC1 domain family, member 5	0.0	
chr7	132006038	132006218	reg1034032.p1	3.435	+	TSC_hg19_v1_chr7_-_131833385 AL834504	-172733	-	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	-764765	-	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-993489	+	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	186792	-	AK123428 TSC_hg19_v1_chr7_-_132261230	255102	-	TSC_hg19_v1_chr7_-_132261268 NM_001105543 NM_020911	255167	-	AL834504|PLXNA4|91584|plexin A4##BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4##AK123428|PLXNA4|91584|plexin A4##NM_001105543|PLXNA4|91584|plexin A4##NM_020911|PLXNA4|91584|plexin A4	0.0	
chr7	22599816	22599921	reg1001700.p2	3.435	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	-60021	-	AL833195 NM_012294	-203347	-	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-614386	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	166955	+	TSC_hg19_v1_chr7_+_22767104 X04403	167250	+	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	262575	-	BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	0.0	
chr7	53418089	53418172	reg1030802.p1	3.435	+	NM_182595	-314782	+	TSC_hg19_v1_chr7_-_51384501 BC094695 AB014533 BC150263 AK309254 BC111496 NM_015198	-2033644	-	AB385366 TSC_hg19_v1_chr7_-_51384416 BC136441 BC144099	-2033750	-	NM_182546 TSC_hg19_v1_chr7_+_54610091 BC028404	1191952	+	TSC_hg19_v1_chr7_-_54826876 BC009480 AK308617 AF086539	1408749	-	TSC_hg19_v1_chr7_-_54826929 AF054184 AK311845 NM_001012456 NM_014302	1408791	-	NM_182595|POM121L12|285877|POM121 membrane glycoprotein-like 12##BC094695|COBL|23242|cordon-bleu homolog (mouse)##AB014533|COBL|23242|cordon-bleu homolog (mouse)##BC150263|COBL|23242|cordon-bleu homolog (mouse)##AK309254|COBL|23242|cordon-bleu homolog (mouse)##BC111496|COBL|23242|cordon-bleu homolog (mouse)##NM_015198|COBL|23242|cordon-bleu homolog (mouse)##BC136441|COBL|23242|cordon-bleu homolog (mouse)##BC144099|COBL|23242|cordon-bleu homolog (mouse)##NM_182546|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC028404|VSTM2A|222008|V-set and transmembrane domain containing 2A##BC009480|SEC61G|23480|Sec61 gamma subunit##AK308617|SEC61G|23480|Sec61 gamma subunit##AF086539|SEC61G|23480|Sec61 gamma subunit##AF054184|SEC61G|23480|Sec61 gamma subunit##AK311845|SEC61G|23480|Sec61 gamma subunit##NM_001012456|SEC61G|23480|Sec61 gamma subunit##NM_014302|SEC61G|23480|Sec61 gamma subunit	0.997969	CTCF.p2:6:0.998
chr7	98400083	98400174	reg1040452.p1	3.435	+	TSC_hg19_v1_chr7_+_98246596 NM_002523 BC035339 BC009924 BC034781 BC048275 DQ893052 DQ896300 U26662	-153392	+	NM_018842 TSC_hg19_v1_chr7_-_98030431	-369695	-	EU832667 EU832746 TSC_hg19_v1_chr7_-_98030403 AF119666 BC013888 AK309936	-369834	-	AM392947 AM393244 AM393838 AM393874 AB528254 AL834349 AL834348 AK312364 TSC_hg19_v1_chr7_-_98467565 BC037895	67402	-	AK225783 AK295543 BC030793 TSC_hg19_v1_chr7_-_98467638	67499	-	TSC_hg19_v1_chr7_-_98467663 NM_001134450 NM_001134451 NM_152913 AY358583	67548	-	NM_002523|NPTX2|4885|neuronal pentraxin II##BC035339|NPTX2|4885|neuronal pentraxin II##BC009924|NPTX2|4885|neuronal pentraxin II##BC034781|NPTX2|4885|neuronal pentraxin II##BC048275|NPTX2|4885|neuronal pentraxin II##DQ893052|NPTX2|4885|neuronal pentraxin II##DQ896300|NPTX2|4885|neuronal pentraxin II##U26662|NPTX2|4885|neuronal pentraxin II##NM_018842|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832667|BAIAP2L1|55971|BAI1-associated protein 2-like 1##EU832746|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AF119666|BAIAP2L1|55971|BAI1-associated protein 2-like 1##BC013888|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AK309936|BAIAP2L1|55971|BAI1-associated protein 2-like 1##AM392947|TMEM130|222865|transmembrane protein 130##AM393244|TMEM130|222865|transmembrane protein 130##AM393838|TMEM130|222865|transmembrane protein 130##AM393874|TMEM130|222865|transmembrane protein 130##AL834349|TMEM130|222865|transmembrane protein 130##AL834348|TMEM130|222865|transmembrane protein 130##AK312364|TMEM130|222865|transmembrane protein 130##BC037895|TMEM130|222865|transmembrane protein 130##AK225783|TMEM130|222865|transmembrane protein 130##AK295543|TMEM130|222865|transmembrane protein 130##BC030793|TMEM130|222865|transmembrane protein 130##NM_001134450|TMEM130|222865|transmembrane protein 130##NM_001134451|TMEM130|222865|transmembrane protein 130##NM_152913|TMEM130|222865|transmembrane protein 130##AY358583|TMEM130|222865|transmembrane protein 130	0.0	
chr11	73742957	73743091	reg1033782.p4	3.434	+	NM_003356 NM_022803	-22743	-	TSC_hg19_v1_chr11_-_73694300 AK025742	-48681	-	TSC_hg19_v1_chr11_-_73693886 AK222540 AK222557 NM_003355	-49139	-	TSC_hg19_v1_chr11_-_73881923 AB231764 AK092089 AX747350 BC037429 NM_015531	139044	-	TSC_hg19_v1_chr11_+_73882299 AK022725	139258	+	TSC_hg19_v1_chr11_+_73882350 BC003046 BC050705 AK225647 AF157028 NM_016147 AK001381	139319	+	NM_003356|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##NM_022803|UCP3|7352|uncoupling protein 3 (mitochondrial, proton carrier)##AK025742|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222540|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AK222557|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##NM_003355|UCP2|7351|uncoupling protein 2 (mitochondrial, proton carrier)##AB231764|C2CD3|26005|C2 calcium-dependent domain containing 3##AK092089|C2CD3|26005|C2 calcium-dependent domain containing 3##NM_015531|C2CD3|26005|C2 calcium-dependent domain containing 3##AK022725|PPME1|51400|protein phosphatase methylesterase 1##BC003046|PPME1|51400|protein phosphatase methylesterase 1##BC050705|PPME1|51400|protein phosphatase methylesterase 1##AK225647|PPME1|51400|protein phosphatase methylesterase 1##AF157028|PPME1|51400|protein phosphatase methylesterase 1##NM_016147|PPME1|51400|protein phosphatase methylesterase 1##AK001381|PPME1|51400|protein phosphatase methylesterase 1	0.0	
chr11	76003021	76003201	reg1038795.p1	3.434	+	TSC_hg19_v1_chr11_-_75921806 AK075540	-81307	-	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	-85599	-	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	-476833	+	TSC_hg19_v1_chr11_-_76091995 AB590785 AF007393 AF081567 HQ258648 NM_004705 AK291843 BC117138 BC117140 BC110304	88897	-	TSC_hg19_v1_chr11_+_76092383 AK125821 BC040665 AK095089	89312	+	TSC_hg19_v1_chr11_-_76155721 AK054718	152614	-	AK075540|WNT11|7481|wingless-type MMTV integration site family, member 11##BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11##BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	0.019219	
chr1	203280858	203280992	reg1036327.p1	3.434	+	TSC_hg19_v1_chr1_+_203274646 NM_006763 U72649 Y09943 BC105948 BC105949 AB463451 EU446924	-6236	+	U62662 BC103695 BC105680 BC105681 BC105682 U29615 TSC_hg19_v1_chr1_-_203198802 AK055165 AK309341 AK225245 AK314331 NM_003465	-82110	-	TSC_hg19_v1_chr1_-_203155913 NM_001276	-124999	-	TSC_hg19_v1_chr1_-_203317366 AB590335 DQ892112 DQ895306 X75546	36459	-	TSC_hg19_v1_chr1_-_203320217 AK291632 AK303866 AK092899 AX747797 BC035281	39284	-	AK172740 TSC_hg19_v1_chr1_-_203320256	39336	-	NM_006763|BTG2|7832|BTG family, member 2##U72649|BTG2|7832|BTG family, member 2##Y09943|BTG2|7832|BTG family, member 2##BC105948|BTG2|7832|BTG family, member 2##BC105949|BTG2|7832|BTG family, member 2##EU446924|BTG2|7832|BTG family, member 2##U62662|CHIT1|1118|chitinase 1 (chitotriosidase)##BC103695|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105680|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105681|CHIT1|1118|chitinase 1 (chitotriosidase)##BC105682|CHIT1|1118|chitinase 1 (chitotriosidase)##U29615|CHIT1|1118|chitinase 1 (chitotriosidase)##AK055165|CHIT1|1118|chitinase 1 (chitotriosidase)##AK309341|CHIT1|1118|chitinase 1 (chitotriosidase)##AK225245|CHIT1|1118|chitinase 1 (chitotriosidase)##AK314331|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_003465|CHIT1|1118|chitinase 1 (chitotriosidase)##NM_001276|CHI3L1|1116|chitinase 3-like 1 (cartilage glycoprotein-39)##DQ892112|FMOD|2331|fibromodulin##DQ895306|FMOD|2331|fibromodulin##X75546|FMOD|2331|fibromodulin##AK291632|FMOD|2331|fibromodulin##AK303866|FMOD|2331|fibromodulin##AK092899|FMOD|2331|fibromodulin##BC035281|FMOD|2331|fibromodulin	0.0	
chr12	111132315	111132418	reg1042596.p2	3.434	+	AK293543 NM_001040107	-4767	-	TSC_hg19_v1_chr12_-_111126921 BC009731 NM_032369	-5408	-	AK295514 NM_001082537 NM_001082538 NM_001173976 NM_024549 TSC_hg19_v1_chr12_+_111051936 DQ278868 NM_001173975 AK055891 AK092775 AX747722 AK024780 BC040113 BC033811 AK301732 AY358184 BC044885 BC062611	-80441	+	L07395 AK297882 AB590512 EU831993 EU832086 TSC_hg19_v1_chr12_-_111180593	48180	-	TSC_hg19_v1_chr12_-_111180641 X74008 BC014073	48290	-	TSC_hg19_v1_chr12_-_111180730 NM_001244974 NM_002710	48390	-	AK293543|HVCN1|84329|hydrogen voltage-gated channel 1##NM_001040107|HVCN1|84329|hydrogen voltage-gated channel 1##BC009731|HVCN1|84329|hydrogen voltage-gated channel 1##NM_032369|HVCN1|84329|hydrogen voltage-gated channel 1##AK295514|TCTN1|79600|tectonic family member 1##NM_001082537|TCTN1|79600|tectonic family member 1##NM_001082538|TCTN1|79600|tectonic family member 1##NM_001173976|TCTN1|79600|tectonic family member 1##NM_024549|TCTN1|79600|tectonic family member 1##DQ278868|TCTN1|79600|tectonic family member 1##NM_001173975|TCTN1|79600|tectonic family member 1##AK055891|TCTN1|79600|tectonic family member 1##AK092775|TCTN1|79600|tectonic family member 1##AK024780|TCTN1|79600|tectonic family member 1##BC040113|TCTN1|79600|tectonic family member 1##BC033811|TCTN1|79600|tectonic family member 1##AK301732|TCTN1|79600|tectonic family member 1##AY358184|TCTN1|79600|tectonic family member 1##BC044885|TCTN1|79600|tectonic family member 1##BC062611|TCTN1|79600|tectonic family member 1##L07395|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##AK297882|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU831993|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##EU832086|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##X74008|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##BC014073|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_001244974|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme##NM_002710|PPP1CC|5501|protein phosphatase 1, catalytic subunit, gamma isozyme	0.077596	
chr1	32332278	32332403	reg1030620.p2	3.434	+	BC114430 AK131447 NM_144569 AK091016 AX746730	-50741	-	TSC_hg19_v1_chr1_-_32264318 AK095829	-68019	-	BC029069 AK096192 TSC_hg19_v1_chr1_-_32264233 BC007910	-68100	-	NM_001195100 NM_001195101	52918	-	TSC_hg19_v1_chr1_-_32403950 BC018662 BC070181	71591	-	TSC_hg19_v1_chr1_-_32403992 NM_080391	71657	-	BC114430|SPOCD1|90853|SPOC domain containing 1##AK131447|SPOCD1|90853|SPOC domain containing 1##NM_144569|SPOCD1|90853|SPOC domain containing 1##AK091016|SPOCD1|90853|SPOC domain containing 1##AK095829|SPOCD1|90853|SPOC domain containing 1##BC029069|SPOCD1|90853|SPOC domain containing 1##BC007910|SPOCD1|90853|SPOC domain containing 1##NM_001195100|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_001195101|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC018662|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##BC070181|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2##NM_080391|PTP4A2|8073|protein tyrosine phosphatase type IVA, member 2	0.0	
chr13	84354504	84354621	reg1038027.p1	3.434	+	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	-3439498	-	BC004205 TSC_hg19_v1_chr13_-_80913114	-3441520	-	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-4299007	+	TSC_hg19_v1_chr13_-_84456424 BC051738	101863	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	101938	-	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	2018877	-	AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6	0.168612	
chr1	44232705	44232781	reg1042429.p2	3.434	+	AK301829 AY051143 NM_006279 NM_174963 NM_174964 NM_174965 NM_174966 NM_174967 NM_174968 NM_174969 NM_174970 NM_174971 TSC_hg19_v1_chr1_+_44173217 BC050380	-59525	+	TSC_hg19_v1_chr1_-_44173037 BC094867	-59720	-	BC002558 TSC_hg19_v1_chr1_+_44115828 AB014577	-116899	+	AF120274 NM_001136215 NM_057090 NM_057091	166248	+	TSC_hg19_v1_chr1_+_44412483 NM_014652	179718	+	TSC_hg19_v1_chr1_+_44412625 AB018267	179867	+	AK301829|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##AY051143|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_006279|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174963|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174964|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174965|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174966|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174967|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174968|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174969|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174970|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##NM_174971|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC050380|ST3GAL3|6487|ST3 beta-galactoside alpha-2,3-sialyltransferase 3##BC094867|LOC100132774|100132774|uncharacterized LOC100132774##BC002558|KDM4A|9682|lysine (K)-specific demethylase 4A##AB014577|KDM4A|9682|lysine (K)-specific demethylase 4A##AF120274|ARTN|9048|artemin##NM_001136215|ARTN|9048|artemin##NM_057090|ARTN|9048|artemin##NM_057091|ARTN|9048|artemin##NM_014652|IPO13|9670|importin 13##AB018267|IPO13|9670|importin 13	0.0	
chr14	56714334	56714423	reg1042857.p1	3.434	+	TSC_hg19_v1_chr14_+_56585163 AF302502	-129204	+	TSC_hg19_v1_chr14_+_56585131 BC009476 NM_021255 AK315727	-129384	+	L25616 TSC_hg19_v1_chr14_+_56078737 AB527439	-635629	+	TSC_hg19_v1_chr14_+_57046539 AK056291 NM_017799 BC045556 AK293099 AK295989 AK309920 BC008949 BC023579 BC121163 BC121164	332167	+	NM_172337 AB593056	557985	-	AK314271 BC032579 NM_021728 AB593058	562766	-	AF302502|PELI2|57161|pellino homolog 2 (Drosophila)##BC009476|PELI2|57161|pellino homolog 2 (Drosophila)##NM_021255|PELI2|57161|pellino homolog 2 (Drosophila)##AK315727|PELI2|57161|pellino homolog 2 (Drosophila)##L25616|KTN1|3895|kinectin 1 (kinesin receptor)##AK056291|C14orf101|54916|chromosome 14 open reading frame 101##NM_017799|C14orf101|54916|chromosome 14 open reading frame 101##BC045556|C14orf101|54916|chromosome 14 open reading frame 101##AK293099|C14orf101|54916|chromosome 14 open reading frame 101##AK295989|C14orf101|54916|chromosome 14 open reading frame 101##AK309920|C14orf101|54916|chromosome 14 open reading frame 101##BC008949|C14orf101|54916|chromosome 14 open reading frame 101##BC023579|C14orf101|54916|chromosome 14 open reading frame 101##BC121163|C14orf101|54916|chromosome 14 open reading frame 101##BC121164|C14orf101|54916|chromosome 14 open reading frame 101##NM_172337|OTX2|5015|orthodenticle homeobox 2##AB593056|OTX2|5015|orthodenticle homeobox 2##AK314271|OTX2|5015|orthodenticle homeobox 2##BC032579|OTX2|5015|orthodenticle homeobox 2##NM_021728|OTX2|5015|orthodenticle homeobox 2##AB593058|OTX2|5015|orthodenticle homeobox 2	0.931606	CTCF.p2:25:0.932
chr16	21525617	21525703	reg1029926.p2	3.434	+	BC036263 NM_130464	-89003	-	BX648477 NM_001014444 NM_001888	-211273	-	BC018061 AK290852 TSC_hg19_v1_chr16_-_21289660	-236012	-	TSC_hg19_v1_chr16_-_21531777 BC071656 AB040413 AB055225 AB055227	6092	-	TSC_hg19_v1_chr16_+_21610912 NM_001077180 NM_016025 AJ278577 AJ278578 AK074529 BC000195 AK313077 AK075022 AK075237	85230	+	AF151839 TSC_hg19_v1_chr16_+_21611174	85494	+	BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##NM_130464|NPIPL3|23117|nuclear pore complex interacting protein-like 3##BX648477|CRYM|1428|crystallin, mu##NM_001014444|CRYM|1428|crystallin, mu##NM_001888|CRYM|1428|crystallin, mu##BC018061|CRYM|1428|crystallin, mu##AK290852|CRYM|1428|crystallin, mu##BC071656|SLC7A5P2|387254|solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2##NM_001077180|METTL9|51108|methyltransferase like 9##NM_016025|METTL9|51108|methyltransferase like 9##AJ278577|METTL9|51108|methyltransferase like 9##AJ278578|METTL9|51108|methyltransferase like 9##AK074529|METTL9|51108|methyltransferase like 9##BC000195|METTL9|51108|methyltransferase like 9##AK313077|METTL9|51108|methyltransferase like 9##AK075022|METTL9|51108|methyltransferase like 9##AK075237|METTL9|51108|methyltransferase like 9##AF151839|METTL9|51108|methyltransferase like 9	0.0	
chr1	94988023	94988128	reg1044175.p1	3.434	+	AK296791 TSC_hg19_v1_chr1_+_94883971 AK302714 AK308159 BC068509 BC009712 X58528 AB529219 CU679455 BT006644 M81182	-104074	+	TSC_hg19_v1_chr1_+_94883966 NM_001122674 NM_002858	-104127	+	TSC_hg19_v1_chr1_-_94703252 BC067839 NM_004815	-284796	-	AF497569 AF497570 BT019808 CR541792 AB528376 AF487337 DQ892755 M16553 TSC_hg19_v1_chr1_-_95007316 M27436 J02931 AK312638 AK310918 AY940729 BC011029 NM_001178096 NM_001993	19200	-	NM_001114106 AK303906 TSC_hg19_v1_chr1_+_95285935 BC033858 AX721168 AK301288 AK316123 AK313574	297879	+	NM_152369 TSC_hg19_v1_chr1_+_95286156 BC053877	298067	+	AK296791|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK302714|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##AK308159|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC068509|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC009712|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##X58528|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BT006644|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##M81182|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_001122674|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##NM_002858|ABCD3|5825|ATP-binding cassette, sub-family D (ALD), member 3##BC067839|ARHGAP29|9411|Rho GTPase activating protein 29##NM_004815|ARHGAP29|9411|Rho GTPase activating protein 29##AF497569|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF497570|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BT019808|F3|2152|coagulation factor III (thromboplastin, tissue factor)##CR541792|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AF487337|F3|2152|coagulation factor III (thromboplastin, tissue factor)##DQ892755|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M16553|F3|2152|coagulation factor III (thromboplastin, tissue factor)##M27436|F3|2152|coagulation factor III (thromboplastin, tissue factor)##J02931|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK312638|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AK310918|F3|2152|coagulation factor III (thromboplastin, tissue factor)##AY940729|F3|2152|coagulation factor III (thromboplastin, tissue factor)##BC011029|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001178096|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001993|F3|2152|coagulation factor III (thromboplastin, tissue factor)##NM_001114106|SLC44A3|126969|solute carrier family 44, member 3##AK303906|SLC44A3|126969|solute carrier family 44, member 3##BC033858|SLC44A3|126969|solute carrier family 44, member 3##AK301288|SLC44A3|126969|solute carrier family 44, member 3##AK316123|SLC44A3|126969|solute carrier family 44, member 3##AK313574|SLC44A3|126969|solute carrier family 44, member 3##NM_152369|SLC44A3|126969|solute carrier family 44, member 3##BC053877|SLC44A3|126969|solute carrier family 44, member 3	0.689321	CTCF.p2:-25:0.689
chr20	1516610	1516782	reg1029316.p2	3.434	+	AK097113 TSC_hg19_v1_chr20_-_1472172 NM_001122962 NM_001134836	-44496	-	AK297072 TSC_hg19_v1_chr20_-_1472142	-44562	-	AY424277 AK095499 AK294440 TSC_hg19_v1_chr20_-_1472067	-44661	-	DQ891297 EU176577 BC033502 NM_178460	21626	-	AB590891 CU692960 BC131747 Y10376 BC025286 BC075835 TSC_hg19_v1_chr20_-_1600656 AK289866 AK313517 BX537992 NM_001083910 NM_001135844 NM_006065	83942	-	AY748247 AY748248 CU687894 BC064532 BC020629 AK292745 NM_001039508 NM_018556 NM_080816	121695	-	NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2##NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2##AK297072|SIRPB2|284759|signal-regulatory protein beta 2##AY424277|SIRPB2|284759|signal-regulatory protein beta 2##AK095499|SIRPB2|284759|signal-regulatory protein beta 2##AK294440|SIRPB2|284759|signal-regulatory protein beta 2##DQ891297|SIRPD|128646|signal-regulatory protein delta##EU176577|SIRPD|128646|signal-regulatory protein delta##BC033502|SIRPD|128646|signal-regulatory protein delta##NM_178460|SIRPD|128646|signal-regulatory protein delta##BC131747|SIRPB1|10326|signal-regulatory protein beta 1##Y10376|SIRPB1|10326|signal-regulatory protein beta 1##BC025286|SIRPB1|10326|signal-regulatory protein beta 1##BC075835|SIRPB1|10326|signal-regulatory protein beta 1##AK289866|SIRPB1|10326|signal-regulatory protein beta 1##BX537992|SIRPB1|10326|signal-regulatory protein beta 1##NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1##NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1##NM_006065|SIRPB1|10326|signal-regulatory protein beta 1##AY748247|SIRPG|55423|signal-regulatory protein gamma##AY748248|SIRPG|55423|signal-regulatory protein gamma##BC064532|SIRPG|55423|signal-regulatory protein gamma##BC020629|SIRPG|55423|signal-regulatory protein gamma##AK292745|SIRPG|55423|signal-regulatory protein gamma##NM_001039508|SIRPG|55423|signal-regulatory protein gamma##NM_018556|SIRPG|55423|signal-regulatory protein gamma##NM_080816|SIRPG|55423|signal-regulatory protein gamma	0.0	
chr20	52508535	52508611	reg1043039.p2	3.434	+	TSC_hg19_v1_chr20_-_52210810 AK290350	-297774	-	AF041259 NM_006526	-308938	-	AK302570 NM_001193421	-706752	+	BC126346 BC126348 AK304213 TSC_hg19_v1_chr20_-_52687087 AK225656 AK308384 AF041260 BC024044	178489	-	AK315220 NM_003657	178730	-	L13286 NM_000782 NM_001128915 TSC_hg19_v1_chr20_-_52790526	281947	-	AK290350|ZNF217|7764|zinc finger protein 217##AF041259|ZNF217|7764|zinc finger protein 217##NM_006526|ZNF217|7764|zinc finger protein 217##AK302570|TSHZ2|128553|teashirt zinc finger homeobox 2##NM_001193421|TSHZ2|128553|teashirt zinc finger homeobox 2##BC126346|BCAS1|8537|breast carcinoma amplified sequence 1##BC126348|BCAS1|8537|breast carcinoma amplified sequence 1##AK304213|BCAS1|8537|breast carcinoma amplified sequence 1##AK225656|BCAS1|8537|breast carcinoma amplified sequence 1##AK308384|BCAS1|8537|breast carcinoma amplified sequence 1##AF041260|BCAS1|8537|breast carcinoma amplified sequence 1##BC024044|BCAS1|8537|breast carcinoma amplified sequence 1##AK315220|BCAS1|8537|breast carcinoma amplified sequence 1##NM_003657|BCAS1|8537|breast carcinoma amplified sequence 1##L13286|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_000782|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1##NM_001128915|CYP24A1|1591|cytochrome P450, family 24, subfamily A, polypeptide 1	0.0	
chr20	62669728	62669802	reg1011331.p1	3.434	+	TSC_hg19_v1_chr20_+_62612576 AB527848	-57179	+	AF221842 TSC_hg19_v1_chr20_+_62612506 AF026031 AK314310 AB019219 BC001666	-57234	+	TSC_hg19_v1_chr20_+_62612487 AK225993 AK001554	-57288	+	AJ243896 AF270652 BC111390 NM_018419 BC035513 BC038590 BC073971 TSC_hg19_v1_chr20_-_62680993 AB033888	11173	-	NM_198723	18673	+	NM_003195	24244	+	AF221842|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AF026031|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK314310|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AB019219|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##BC001666|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK225993|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AK001554|PRPF6|24148|PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)##AJ243896|SOX18|54345|SRY (sex determining region Y)-box 18##AF270652|SOX18|54345|SRY (sex determining region Y)-box 18##BC111390|SOX18|54345|SRY (sex determining region Y)-box 18##NM_018419|SOX18|54345|SRY (sex determining region Y)-box 18##BC035513|SOX18|54345|SRY (sex determining region Y)-box 18##BC038590|SOX18|54345|SRY (sex determining region Y)-box 18##BC073971|SOX18|54345|SRY (sex determining region Y)-box 18##AB033888|SOX18|54345|SRY (sex determining region Y)-box 18##NM_198723|TCEA2|6919|transcription elongation factor A (SII), 2##NM_003195|TCEA2|6919|transcription elongation factor A (SII), 2	0.0	
chr4	167761061	167761168	reg1034107.p1	3.434	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-966660	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-1460957	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-1512259	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	394497	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	394590	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	394626	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.0	
chr5	734423	734553	reg1035023.p2	3.434	+	TSC_hg19_v1_chr5_-_693430 AB017016 BC040496 AK098392 NM_007030	-41027	-	TSC_hg19_v1_chr5_+_612458 AK001427 BC000132 AB040952 AB384228 AK299072 CU674056 BC001750	-122022	+	NM_018140 TSC_hg19_v1_chr5_+_612451	-122060	+	AK023215 NM_024786	116612	-	TSC_hg19_v1_chr5_-_892666 BX648703 AK297573 AK301987 NM_001009877	158161	-	TSC_hg19_v1_chr5_-_892898 AY211916	158402	-	AB017016|TPPP|11076|tubulin polymerization promoting protein##BC040496|TPPP|11076|tubulin polymerization promoting protein##AK098392|TPPP|11076|tubulin polymerization promoting protein##NM_007030|TPPP|11076|tubulin polymerization promoting protein##AK001427|CEP72|55722|centrosomal protein 72kDa##BC000132|CEP72|55722|centrosomal protein 72kDa##AB040952|CEP72|55722|centrosomal protein 72kDa##AK299072|CEP72|55722|centrosomal protein 72kDa##BC001750|CEP72|55722|centrosomal protein 72kDa##NM_018140|CEP72|55722|centrosomal protein 72kDa##AK023215|ZDHHC11|79844|zinc finger, DHHC-type containing 11##NM_024786|ZDHHC11|79844|zinc finger, DHHC-type containing 11##BX648703|BRD9|65980|bromodomain containing 9##AK297573|BRD9|65980|bromodomain containing 9##AK301987|BRD9|65980|bromodomain containing 9##NM_001009877|BRD9|65980|bromodomain containing 9##AY211916|BRD9|65980|bromodomain containing 9	0.849723	CTCF.p2:-17:0.850
chr6	127391171	127391297	reg1038817.p1	3.434	+	TSC_hg19_v1_chr6_+_126661265 BC039556 NM_001012507 AY902475 BC062798 BC046178 BC017928	-729964	+	TSC_hg19_v1_chr6_+_126307685 AK308651	-1083571	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	-1083632	+	TSC_hg19_v1_chr6_+_127439818 BC022367	48577	+	NM_032784 AF251057	48817	+	NM_001242851 NM_001242844 NM_001242849 NM_001242852 TSC_hg19_v1_chr6_+_127587982 NM_001242845 NM_001242846 NM_001242850 NM_030963	196670	+	BC039556|CENPW|387103|centromere protein W##NM_001012507|CENPW|387103|centromere protein W##AY902475|CENPW|387103|centromere protein W##BC062798|CENPW|387103|centromere protein W##BC046178|CENPW|387103|centromere protein W##BC017928|CENPW|387103|centromere protein W##AK308651|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##BC022367|RSPO3|84870|R-spondin 3##NM_032784|RSPO3|84870|R-spondin 3##AF251057|RSPO3|84870|R-spondin 3##NM_001242851|RNF146|81847|ring finger protein 146##NM_001242844|RNF146|81847|ring finger protein 146##NM_001242849|RNF146|81847|ring finger protein 146##NM_001242852|RNF146|81847|ring finger protein 146##NM_001242845|RNF146|81847|ring finger protein 146##NM_001242846|RNF146|81847|ring finger protein 146##NM_001242850|RNF146|81847|ring finger protein 146##NM_030963|RNF146|81847|ring finger protein 146	0.929791	CTCF.p2:0:0.930
chr6	89693862	89693941	reg1036554.p1	3.434	+	NM_003800 TSC_hg19_v1_chr6_-_89673347	-20554	-	TSC_hg19_v1_chr6_-_89673338 AB012142 AB012143 BC019954 AK295719 AK312407 AK299777	-20593	-	AB009022 AB009023 AB009024 CU676488 AB385589 TSC_hg19_v1_chr6_-_89673246	-20710	-	TSC_hg19_v1_chr6_+_89790461 NM_006813	96536	+	TSC_hg19_v1_chr6_+_89790469 AK312665 AK130046 U03105 BC018112 AB464669 AY303779	96637	+	TSC_hg19_v1_chr6_+_89791523 BC044919	97642	+	NM_003800|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012142|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB012143|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##BC019954|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK295719|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK312407|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AK299777|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009022|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009023|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##AB009024|RNGTT|8732|RNA guanylyltransferase and 5'-phosphatase##NM_006813|PNRC1|10957|proline-rich nuclear receptor coactivator 1##AK312665|PNRC1|10957|proline-rich nuclear receptor coactivator 1##AK130046|PNRC1|10957|proline-rich nuclear receptor coactivator 1##U03105|PNRC1|10957|proline-rich nuclear receptor coactivator 1##BC018112|PNRC1|10957|proline-rich nuclear receptor coactivator 1##AY303779|PNRC1|10957|proline-rich nuclear receptor coactivator 1##BC044919|PNRC1|10957|proline-rich nuclear receptor coactivator 1	0.0	
chr7	140397846	140397955	reg1042913.p1	3.434	+	TSC_hg19_v1_chr7_+_140396507 AF067166 NM_004546 AF050639 BC063026 BC001168 CR542121	-1397	+	TSC_hg19_v1_chr7_+_140372910 AF131745 AY302592 NM_052853 BC014107	-24962	+	AB033103 TSC_hg19_v1_chr7_-_140340614	-57290	-	TSC_hg19_v1_chr7_-_140624512 AB529216 AK314346 BC101757 BC112079 M95712 NM_004333	226607	-	AF151897 AK024776 NM_016071	316567	-	TSC_hg19_v1_chr7_-_140714748 AF078858 BC105793	316850	-	AF067166|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##NM_004546|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF050639|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC063026|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##BC001168|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##CR542121|NDUFB2|4708|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2, 8kDa##AF131745|ADCK2|90956|aarF domain containing kinase 2##AY302592|ADCK2|90956|aarF domain containing kinase 2##NM_052853|ADCK2|90956|aarF domain containing kinase 2##BC014107|ADCK2|90956|aarF domain containing kinase 2##AB033103|DENND2A|27147|DENN/MADD domain containing 2A##AK314346|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC101757|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##BC112079|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##M95712|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##NM_004333|BRAF|673|v-raf murine sarcoma viral oncogene homolog B1##AF151897|MRPS33|51650|mitochondrial ribosomal protein S33##AK024776|MRPS33|51650|mitochondrial ribosomal protein S33##NM_016071|MRPS33|51650|mitochondrial ribosomal protein S33##AF078858|MRPS33|51650|mitochondrial ribosomal protein S33##BC105793|MRPS33|51650|mitochondrial ribosomal protein S33	0.0	
chr8	146010848	146010937	reg1026335.p1	3.434	+	TSC_hg19_v1_chr8_-_145980977 NM_138367	-29918	-	TSC_hg19_v1_chr8_-_145980846 AK000435	-30038	-	TSC_hg19_v1_chr8_-_145911232 AK296353	-99665	-	TSC_hg19_v1_chr8_-_146012703 BC004480 AL833814 AK096508 NM_030580	1808	-	TSC_hg19_v1_chr8_-_146017753 BC012197 NM_033301 BC013104 BC000077	6848	-	AK301073 D28421 TSC_hg19_v1_chr8_-_146017776	6884	-	NM_138367|ZNF251|90987|zinc finger protein 251##AK000435|ZNF251|90987|zinc finger protein 251##AK296353|ARHGAP39|80728|Rho GTPase activating protein 39##BC004480|ZNF34|80778|zinc finger protein 34##AL833814|ZNF34|80778|zinc finger protein 34##AK096508|ZNF34|80778|zinc finger protein 34##NM_030580|ZNF34|80778|zinc finger protein 34##BC012197|RPL8|6132|ribosomal protein L8##NM_033301|RPL8|6132|ribosomal protein L8##BC013104|RPL8|6132|ribosomal protein L8##BC000077|RPL8|6132|ribosomal protein L8##AK301073|RPL8|6132|ribosomal protein L8	0.0	
chr9	37511177	37511270	reg1039146.p1	3.434	+	TSC_hg19_v1_chr9_+_37485944 BC014331 AK023452 AK302345 AK303167 NM_022490 AK301347 AK024032 AK225050 BC017766 BC001337 CR457313 AK091294 AX746899	-25193	+	TSC_hg19_v1_chr9_-_37465448 AK292404	-45782	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	-45828	-	AF174598 AF176705 NM_012166 TSC_hg19_v1_chr9_-_37576280	65042	-	CR627326 AB435233 TSC_hg19_v1_chr9_-_37592574 BC034247	81296	-	TSC_hg19_v1_chr9_-_37592575 BC029423 NM_001001790 NM_001134484 NM_001134485	81382	-	BC014331|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK023452|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK302345|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK303167|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##NM_022490|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK301347|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK024032|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK225050|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC017766|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC001337|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##CR457313|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK091294|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5##AF174598|FBXO10|26267|F-box protein 10##AF176705|FBXO10|26267|F-box protein 10##NM_012166|FBXO10|26267|F-box protein 10##AB435233|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC034247|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC029423|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001001790|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134484|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134485|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)	0.06683	
chr9	97943664	97943787	reg1046006.p1	3.434	+	AK298959 TSC_hg19_v1_chr9_+_97766501 AK300486	-177250	+	NM_001193329 AJ560639	-421728	+	BC029616 TSC_hg19_v1_chr9_+_97488999	-454722	+	X66894 NM_001243743	135795	-	AK312548 AK222871 TSC_hg19_v1_chr9_-_98079974 BC015748 X66893 AK304887 NM_000136 NM_001243744	136206	-	TSC_hg19_v1_chr9_-_98268874 AB209495 AB233423 AB233424 CU692174	325148	-	AK298959|C9orf3|84909|chromosome 9 open reading frame 3##AK300486|C9orf3|84909|chromosome 9 open reading frame 3##NM_001193329|C9orf3|84909|chromosome 9 open reading frame 3##AJ560639|C9orf3|84909|chromosome 9 open reading frame 3##BC029616|C9orf3|84909|chromosome 9 open reading frame 3##X66894|FANCC|2176|Fanconi anemia, complementation group C##NM_001243743|FANCC|2176|Fanconi anemia, complementation group C##AK312548|FANCC|2176|Fanconi anemia, complementation group C##AK222871|FANCC|2176|Fanconi anemia, complementation group C##BC015748|FANCC|2176|Fanconi anemia, complementation group C##X66893|FANCC|2176|Fanconi anemia, complementation group C##AK304887|FANCC|2176|Fanconi anemia, complementation group C##NM_000136|FANCC|2176|Fanconi anemia, complementation group C##NM_001243744|FANCC|2176|Fanconi anemia, complementation group C##AB209495|PTCH1|5727|patched 1##AB233423|PTCH1|5727|patched 1##AB233424|PTCH1|5727|patched 1	0.999722	CTCF.p2:3:1.000
chr10	3718928	3718996	reg1042818.p2	3.433	+	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-503957	-	CU678866 TSC_hg19_v1_chr10_-_3214975 AB384562 BC005025 AK225084 AK293788 AK315117 AK294865 AK299464 AK303406 BC095422 BX649017 AF061243	-503992	-	BC045577 TSC_hg19_v1_chr10_-_3214936	-504037	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	108349	-	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	108547	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	1149456	+	BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC005025|PITRM1|10531|pitrilysin metallopeptidase 1##AK225084|PITRM1|10531|pitrilysin metallopeptidase 1##AK293788|PITRM1|10531|pitrilysin metallopeptidase 1##AK315117|PITRM1|10531|pitrilysin metallopeptidase 1##AK294865|PITRM1|10531|pitrilysin metallopeptidase 1##AK299464|PITRM1|10531|pitrilysin metallopeptidase 1##AK303406|PITRM1|10531|pitrilysin metallopeptidase 1##BC095422|PITRM1|10531|pitrilysin metallopeptidase 1##BX649017|PITRM1|10531|pitrilysin metallopeptidase 1##AF061243|PITRM1|10531|pitrilysin metallopeptidase 1##BC045577|PITRM1|10531|pitrilysin metallopeptidase 1##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2	0.0	
chr10	46029039	46029171	reg1038468.p2	3.433	+	TSC_hg19_v1_chr10_+_45869700 BC034464 BC040450 J03600 J03571 AB590536 HQ258335 HM592258 HM592259 HM592260 HM592261	-159408	+	TSC_hg19_v1_chr10_+_45869638 AB208946 NM_000698 AK225603 BC130332 BC132677 BC143985 BC143986 AK315223	-159468	+	AK131555 NM_001004297	-218050	-	AK313340 BC025394 NM_001002266 AK307667	1714	-	TSC_hg19_v1_chr10_-_46090318 BC066988 NM_001002265 NM_145021	61189	-	TSC_hg19_v1_chr10_-_46168221 AK090704 AX746581 BC017591 AK292420 AK292469 AK314395 AK097924 NM_001128324 NM_174890 BC045587	139109	-	BC034464|ALOX5|240|arachidonate 5-lipoxygenase##BC040450|ALOX5|240|arachidonate 5-lipoxygenase##J03600|ALOX5|240|arachidonate 5-lipoxygenase##J03571|ALOX5|240|arachidonate 5-lipoxygenase##HQ258335|ALOX5|240|arachidonate 5-lipoxygenase##HM592258|ALOX5|240|arachidonate 5-lipoxygenase##HM592259|ALOX5|240|arachidonate 5-lipoxygenase##HM592260|ALOX5|240|arachidonate 5-lipoxygenase##HM592261|ALOX5|240|arachidonate 5-lipoxygenase##AB208946|ALOX5|240|arachidonate 5-lipoxygenase##NM_000698|ALOX5|240|arachidonate 5-lipoxygenase##AK225603|ALOX5|240|arachidonate 5-lipoxygenase##BC130332|ALOX5|240|arachidonate 5-lipoxygenase##BC132677|ALOX5|240|arachidonate 5-lipoxygenase##BC143985|ALOX5|240|arachidonate 5-lipoxygenase##BC143986|ALOX5|240|arachidonate 5-lipoxygenase##AK315223|ALOX5|240|arachidonate 5-lipoxygenase##AK131555|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##NM_001004297|OR13A1|79290|olfactory receptor, family 13, subfamily A, member 1##AK313340|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC025394|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002266|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK307667|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##BC066988|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_001002265|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##NM_145021|MARCH8|220972|membrane-associated ring finger (C3HC4) 8##AK090704|ZFAND4|93550|zinc finger, AN1-type domain 4##BC017591|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292420|ZFAND4|93550|zinc finger, AN1-type domain 4##AK292469|ZFAND4|93550|zinc finger, AN1-type domain 4##AK314395|ZFAND4|93550|zinc finger, AN1-type domain 4##AK097924|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_001128324|ZFAND4|93550|zinc finger, AN1-type domain 4##NM_174890|ZFAND4|93550|zinc finger, AN1-type domain 4##BC045587|ZFAND4|93550|zinc finger, AN1-type domain 4	0.0	
chr10	73595995	73596175	reg1041864.p1	3.433	+	AY563161 AY563162 NM_001171935 NM_001171936	-24446	+	AY563165 AY563166 NM_001171933 NM_001171934	-40558	+	CU676566 BC020568 AY265805 TSC_hg19_v1_chr10_-_73533278 EF506490 AK024449 BC111048 AY358379 NM_022153	-62779	-	TSC_hg19_v1_chr10_-_73611004 BT006849 CR456746 CU678650 DQ893009 DQ896255 M60255 M60257 M60258 AB527305 BC001503 J03015 M32221 D00422 M81355 AB209776 BC004275 BC007612	14896	-	AK223290 AK293672 AK307721 TSC_hg19_v1_chr10_-_73611007 AK129790 J03077 AK057878 BC091483	14932	-	AK299184 TSC_hg19_v1_chr10_-_73611043	14958	-	AY563161|CDH23|64072|cadherin-related 23##AY563162|CDH23|64072|cadherin-related 23##NM_001171935|CDH23|64072|cadherin-related 23##NM_001171936|CDH23|64072|cadherin-related 23##AY563165|CDH23|64072|cadherin-related 23##AY563166|CDH23|64072|cadherin-related 23##NM_001171933|CDH23|64072|cadherin-related 23##NM_001171934|CDH23|64072|cadherin-related 23##BC020568|C10orf54|64115|chromosome 10 open reading frame 54##AY265805|C10orf54|64115|chromosome 10 open reading frame 54##EF506490|C10orf54|64115|chromosome 10 open reading frame 54##AK024449|C10orf54|64115|chromosome 10 open reading frame 54##BC111048|C10orf54|64115|chromosome 10 open reading frame 54##AY358379|C10orf54|64115|chromosome 10 open reading frame 54##NM_022153|C10orf54|64115|chromosome 10 open reading frame 54##BT006849|PSAP|5660|prosaposin##CR456746|PSAP|5660|prosaposin##DQ893009|PSAP|5660|prosaposin##DQ896255|PSAP|5660|prosaposin##M60255|PSAP|5660|prosaposin##M60257|PSAP|5660|prosaposin##M60258|PSAP|5660|prosaposin##BC001503|PSAP|5660|prosaposin##J03015|PSAP|5660|prosaposin##M32221|PSAP|5660|prosaposin##D00422|PSAP|5660|prosaposin##M81355|PSAP|5660|prosaposin##AB209776|PSAP|5660|prosaposin##BC004275|PSAP|5660|prosaposin##BC007612|PSAP|5660|prosaposin##AK223290|PSAP|5660|prosaposin##AK293672|PSAP|5660|prosaposin##AK307721|PSAP|5660|prosaposin##AK129790|PSAP|5660|prosaposin##J03077|PSAP|5660|prosaposin##AK057878|PSAP|5660|prosaposin##BC091483|PSAP|5660|prosaposin##AK299184|PSAP|5660|prosaposin	0.0	
chr1	221340360	221340481	reg1040623.p1	3.433	+	TSC_hg19_v1_chr1_+_221053066 AB463713 DQ893305 DQ896761	-287321	+	TSC_hg19_v1_chr1_+_221052845 AK127923 AK313298 BC033808	-287506	+	TSC_hg19_v1_chr1_+_221052739 AK056326 NM_021958 BC007294 AB208812 M60721	-287659	+	NM_144728	570381	-	AF179212 TSC_hg19_v1_chr1_-_221915417 BC063826 BC031405	574988	-	TSC_hg19_v1_chr1_-_221915432 AK022513 AK293287	575010	-	DQ893305|HLX|3142|H2.0-like homeobox##DQ896761|HLX|3142|H2.0-like homeobox##AK127923|HLX|3142|H2.0-like homeobox##AK313298|HLX|3142|H2.0-like homeobox##BC033808|HLX|3142|H2.0-like homeobox##AK056326|HLX|3142|H2.0-like homeobox##NM_021958|HLX|3142|H2.0-like homeobox##BC007294|HLX|3142|H2.0-like homeobox##AB208812|HLX|3142|H2.0-like homeobox##M60721|HLX|3142|H2.0-like homeobox##NM_144728|DUSP10|11221|dual specificity phosphatase 10##AF179212|DUSP10|11221|dual specificity phosphatase 10##BC063826|DUSP10|11221|dual specificity phosphatase 10##BC031405|DUSP10|11221|dual specificity phosphatase 10##AK022513|DUSP10|11221|dual specificity phosphatase 10##AK293287|DUSP10|11221|dual specificity phosphatase 10	0.0	
chr15	84861793	84861923	reg1038717.p1	3.433	+	NM_001243531	-20617	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-539031	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-745630	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	282423	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	335614	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	335648	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	0.315969	CTCF.p2:-8:0.316
chr16	81771892	81772039	reg1003692.p2	3.433	+	AY172689 NM_030629	-243012	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-293132	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-423315	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	40932	+	TSC_hg19_v1_chr16_+_81812901 AB208914	40937	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	40965	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr17	75278807	75278923	reg1042801.p2	3.433	+	NM_001113491 AF189713 TSC_hg19_v1_chr17_+_75277583 AJ312323 AK300270 AK300268 BC054004	-1323	+	AK293206 NM_001144001	-97571	+	TSC_hg19_v1_chr17_+_75137104 AK290913 BC142979 BC136523 BC136525	-141730	+	AK290368 NM_001113492 TSC_hg19_v1_chr17_+_75283980	5114	+	TSC_hg19_v1_chr17_+_75315629 AJ312321 NM_006640	36745	+	TSC_hg19_v1_chr17_+_75315642 AF123052	36784	+	NM_001113491|SEPT9|10801|septin 9##AF189713|SEPT9|10801|septin 9##AJ312323|SEPT9|10801|septin 9##AK300270|SEPT9|10801|septin 9##AK300268|SEPT9|10801|septin 9##BC054004|SEPT9|10801|septin 9##AK293206|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001144001|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AK290913|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC142979|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136523|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136525|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AK290368|SEPT9|10801|septin 9##NM_001113492|SEPT9|10801|septin 9##AJ312321|SEPT9|10801|septin 9##NM_006640|SEPT9|10801|septin 9##AF123052|SEPT9|10801|septin 9	0.013511	
chr18	60825091	60825221	reg1036961.p2	3.433	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-29221	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-440848	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-441230	+	BC027258 NM_000633 NM_000657	161404	-	TSC_hg19_v1_chr18_-_60986977 X06487	161837	-	TSC_hg19_v1_chr18_-_60987309 M13994	162130	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr19	50410593	50410739	reg1036867.p1	3.433	+	AK074097 BC064378 BC090852 TSC_hg19_v1_chr19_-_50400148 AF293462 AY358933 NM_152899	-10513	-	TSC_hg19_v1_chr19_+_50381392 AK090606 AX746531	-29208	+	NM_001168222 NM_024682 TSC_hg19_v1_chr19_+_50380945 BC003516 AK022230 AK300007 AK309412 AB449903 AB590884 CU678472	-29817	+	CR541721 CU678568 CU690780 AM393785 DQ892591 DQ896857 AB463152 TSC_hg19_v1_chr19_-_50413102 BC014842	2436	-	NM_012068 AK290592	21322	+	NM_001193646 AK091985 AB021663 AK024402 TSC_hg19_v1_chr19_+_50432461 AB073613 BC005174	21768	+	BC064378|IL4I1|259307|interleukin 4 induced 1##BC090852|IL4I1|259307|interleukin 4 induced 1##AF293462|IL4I1|259307|interleukin 4 induced 1##AY358933|IL4I1|259307|interleukin 4 induced 1##NM_152899|IL4I1|259307|interleukin 4 induced 1##AK090606|TBC1D17|79735|TBC1 domain family, member 17##NM_001168222|TBC1D17|79735|TBC1 domain family, member 17##NM_024682|TBC1D17|79735|TBC1 domain family, member 17##BC003516|TBC1D17|79735|TBC1 domain family, member 17##AK022230|TBC1D17|79735|TBC1 domain family, member 17##AK300007|TBC1D17|79735|TBC1 domain family, member 17##AK309412|TBC1D17|79735|TBC1 domain family, member 17##AB449903|TBC1D17|79735|TBC1 domain family, member 17##CR541721|NUP62|23636|nucleoporin 62kDa##AM393785|NUP62|23636|nucleoporin 62kDa##DQ892591|NUP62|23636|nucleoporin 62kDa##DQ896857|NUP62|23636|nucleoporin 62kDa##BC014842|NUP62|23636|nucleoporin 62kDa##NM_012068|ATF5|22809|activating transcription factor 5##AK290592|ATF5|22809|activating transcription factor 5##NM_001193646|ATF5|22809|activating transcription factor 5##AK091985|ATF5|22809|activating transcription factor 5##AB021663|ATF5|22809|activating transcription factor 5##AK024402|ATF5|22809|activating transcription factor 5##AB073613|ATF5|22809|activating transcription factor 5##BC005174|ATF5|22809|activating transcription factor 5	0.0	
chr22	24666582	24666736	reg1029593.p1	3.433	+	CT841518 AK292006 BC073999 M64099 AK225661 AK226019 AK297869 AK304522 AK312401 AK293683 AL117414 BC011362 NM_001099781 NM_001099782 NM_004121	-25680	-	BC033107 NM_019601 TSC_hg19_v1_chr22_+_24577443	-89215	+	TSC_hg19_v1_chr22_+_24577424 AK026431	-89232	+	TSC_hg19_v1_chr22_+_24666804 NM_001145468 NM_015330 AK097129 AK301482 AB209022 AL832425 BC005093 BC136471	181	+	TSC_hg19_v1_chr22_+_24819870 EU036694	153221	+	NM_000675 AK123058 EU036693 AK301420 BC013780	156906	+	CT841518|GGT5|2687|gamma-glutamyltransferase 5##AK292006|GGT5|2687|gamma-glutamyltransferase 5##BC073999|GGT5|2687|gamma-glutamyltransferase 5##M64099|GGT5|2687|gamma-glutamyltransferase 5##AK225661|GGT5|2687|gamma-glutamyltransferase 5##AK226019|GGT5|2687|gamma-glutamyltransferase 5##AK297869|GGT5|2687|gamma-glutamyltransferase 5##AK304522|GGT5|2687|gamma-glutamyltransferase 5##AK312401|GGT5|2687|gamma-glutamyltransferase 5##AK293683|GGT5|2687|gamma-glutamyltransferase 5##AL117414|GGT5|2687|gamma-glutamyltransferase 5##BC011362|GGT5|2687|gamma-glutamyltransferase 5##NM_001099781|GGT5|2687|gamma-glutamyltransferase 5##NM_001099782|GGT5|2687|gamma-glutamyltransferase 5##NM_004121|GGT5|2687|gamma-glutamyltransferase 5##BC033107|SUSD2|56241|sushi domain containing 2##NM_019601|SUSD2|56241|sushi domain containing 2##AK026431|SUSD2|56241|sushi domain containing 2##NM_001145468|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##NM_015330|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK097129|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AK301482|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##AL832425|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC005093|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##BC136471|SPECC1L|23384|sperm antigen with calponin homology and coiled-coil domains 1-like##EU036694|ADORA2A|135|adenosine A2a receptor##NM_000675|ADORA2A|135|adenosine A2a receptor##AK123058|ADORA2A|135|adenosine A2a receptor##EU036693|ADORA2A|135|adenosine A2a receptor##BC013780|ADORA2A|135|adenosine A2a receptor	0.0	
chr3	154622284	154622369	reg1036924.p1	3.433	+	DQ318360 NM_001038705	-474823	-	AJ577133 AJ577134 CU690268 DQ891010 TSC_hg19_v1_chr3_-_154042272 BC036035 AF217190 AK314435 NM_001114397 NM_020865	-580066	-	TSC_hg19_v1_chr3_+_153839226 NM_001251963 NM_015595 AF415175 AK123040 BC078655 AB073386	-783124	+	AK310664 NM_000902 BX647134	175123	+	TSC_hg19_v1_chr3_+_154797644 NM_007287	175348	+	TSC_hg19_v1_chr3_+_154797803 BC106070	175480	+	DQ318360|GPR149|344758|G protein-coupled receptor 149##NM_001038705|GPR149|344758|G protein-coupled receptor 149##AJ577133|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AJ577134|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##DQ891010|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##BC036035|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AF217190|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##AK314435|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001114397|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_020865|DHX36|170506|DEAH (Asp-Glu-Ala-His) box polypeptide 36##NM_001251963|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##NM_015595|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AF415175|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK123040|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##BC078655|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AB073386|ARHGEF26|26084|Rho guanine nucleotide exchange factor (GEF) 26##AK310664|MME|4311|membrane metallo-endopeptidase##NM_000902|MME|4311|membrane metallo-endopeptidase##BX647134|MME|4311|membrane metallo-endopeptidase##NM_007287|MME|4311|membrane metallo-endopeptidase##BC106070|MME|4311|membrane metallo-endopeptidase	0.945807	CTCF.p2:-4:0.946
chr3	49481557	49481676	reg1042112.p1	3.433	+	TSC_hg19_v1_chr3_-_49466744 AK313073 NM_032316 AK301846	-14864	-	TSC_hg19_v1_chr3_-_49466731 BC005050 AK094248 AF538150 AJ299740 BC050653	-14913	-	NM_000481 NM_001164710 NM_001164711 NM_001164712 TSC_hg19_v1_chr3_-_49460121	-21500	-	TSC_hg19_v1_chr3_+_49506079 NM_001177643	24491	+	TSC_hg19_v1_chr3_+_49507721 NM_001165928 NM_001177634 NM_001177635 NM_001177636 NM_001177637 NM_001177638 NM_001177639 NM_001177640 NM_001177641 NM_001177642 NM_001177644 NM_004393 L19711 BC012740 BC014616 AK291692	26175	+	TSC_hg19_v1_chr3_+_49547870 DQ893491 DQ896435	66301	+	AK313073|NICN1|84276|nicolin 1##NM_032316|NICN1|84276|nicolin 1##AK301846|NICN1|84276|nicolin 1##BC005050|NICN1|84276|nicolin 1##AK094248|NICN1|84276|nicolin 1##AF538150|NICN1|84276|nicolin 1##AJ299740|NICN1|84276|nicolin 1##BC050653|NICN1|84276|nicolin 1##NM_000481|AMT|275|aminomethyltransferase##NM_001164710|AMT|275|aminomethyltransferase##NM_001164711|AMT|275|aminomethyltransferase##NM_001164712|AMT|275|aminomethyltransferase##NM_001177643|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001165928|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177634|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177635|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177636|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177637|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177638|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177639|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177640|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177641|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177642|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_001177644|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##NM_004393|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##L19711|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##BC012740|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##BC014616|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##AK291692|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##DQ893491|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)##DQ896435|DAG1|1605|dystroglycan 1 (dystrophin-associated glycoprotein 1)	0.0	
chr4	78114896	78114978	reg1039410.p1	3.433	+	TSC_hg19_v1_chr4_+_78079302 L49506 AK293899 AB529093 BT019503 CR542181 CR542200 CU689406 DQ890836 DQ893991	-35444	+	TSC_hg19_v1_chr4_+_78078398 U47414	-36477	+	TSC_hg19_v1_chr4_+_78078359 NM_004354 AK292029 BC032518	-36576	+	AF044197 NM_006419	317968	+	TSC_hg19_v1_chr4_-_78740523 AK304397 AK058188 AK303417 NM_144571	625607	-	NM_020236 AF212225 TSC_hg19_v1_chr4_+_78783990 BC014356 BC017765 AK315600 BC015109 BC032595	668977	+	L49506|CCNG2|901|cyclin G2##AK293899|CCNG2|901|cyclin G2##BT019503|CCNG2|901|cyclin G2##CR542181|CCNG2|901|cyclin G2##CR542200|CCNG2|901|cyclin G2##DQ890836|CCNG2|901|cyclin G2##DQ893991|CCNG2|901|cyclin G2##U47414|CCNG2|901|cyclin G2##NM_004354|CCNG2|901|cyclin G2##AK292029|CCNG2|901|cyclin G2##BC032518|CCNG2|901|cyclin G2##AF044197|CXCL13|10563|chemokine (C-X-C motif) ligand 13##NM_006419|CXCL13|10563|chemokine (C-X-C motif) ligand 13##AK304397|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK058188|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##AK303417|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_144571|CNOT6L|246175|CCR4-NOT transcription complex, subunit 6-like##NM_020236|MRPL1|65008|mitochondrial ribosomal protein L1##AF212225|MRPL1|65008|mitochondrial ribosomal protein L1##BC014356|MRPL1|65008|mitochondrial ribosomal protein L1##BC017765|MRPL1|65008|mitochondrial ribosomal protein L1##AK315600|MRPL1|65008|mitochondrial ribosomal protein L1##BC015109|MRPL1|65008|mitochondrial ribosomal protein L1##BC032595|MRPL1|65008|mitochondrial ribosomal protein L1	0.0	
chr5	171761313	171761428	reg1028631.p1	3.433	+	NM_152277 TSC_hg19_v1_chr5_-_171710808	-50555	-	BC019910 TSC_hg19_v1_chr5_-_171710765 AK313274	-50666	-	NM_001171183	-140195	+	AB430862 DQ109556 BC038561 TSC_hg19_v1_chr5_-_171881387	120001	-	TSC_hg19_v1_chr5_-_171881518 AK128871 NM_001017995	120133	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	306883	+	NM_152277|UBTD2|92181|ubiquitin domain containing 2##BC019910|UBTD2|92181|ubiquitin domain containing 2##AK313274|UBTD2|92181|ubiquitin domain containing 2##NM_001171183|EFCAB9|285588|EF-hand calcium binding domain 9##AB430862|SH3PXD2B|285590|SH3 and PX domains 2B##DQ109556|SH3PXD2B|285590|SH3 and PX domains 2B##BC038561|SH3PXD2B|285590|SH3 and PX domains 2B##AK128871|SH3PXD2B|285590|SH3 and PX domains 2B##NM_001017995|SH3PXD2B|285590|SH3 and PX domains 2B##GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)	0.433196	CTCF.p2:0:0.433
chr6	149353984	149354136	reg1038277.p2	3.433	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-285851	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-689869	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-690070	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	285043	+	AK315038 NM_015093 AK307650	285381	+	AY340238 NM_001002255 BC130305 HQ258040	367448	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr10	103728876	103729056	reg1043593.p2	3.432	+	BC034685 TSC_hg19_v1_chr10_-_103603552 AK314536 AK315042 AK055089 AK094668 NM_014591 NM_173191 NM_173192 NM_173193 NM_173195 NM_173197	-125359	-	DQ148483 AB463824 AM392816 AK027347 AK301433 NM_173194 AL136722	-129354	-	TSC_hg19_v1_chr10_-_103578213 NM_001142434 NM_012215	-150748	-	TSC_hg19_v1_chr10_-_103815931 BC032118 AK126113 NM_024541 BC054882	86946	-	NM_024747 TSC_hg19_v1_chr10_+_103825159 BC014993 AF536238 BC011594	96176	+	AK300588 TSC_hg19_v1_chr10_-_103874641	145653	-	BC034685|KCNIP2|30819|Kv channel interacting protein 2##AK314536|KCNIP2|30819|Kv channel interacting protein 2##AK315042|KCNIP2|30819|Kv channel interacting protein 2##AK055089|KCNIP2|30819|Kv channel interacting protein 2##AK094668|KCNIP2|30819|Kv channel interacting protein 2##NM_014591|KCNIP2|30819|Kv channel interacting protein 2##NM_173191|KCNIP2|30819|Kv channel interacting protein 2##NM_173192|KCNIP2|30819|Kv channel interacting protein 2##NM_173193|KCNIP2|30819|Kv channel interacting protein 2##NM_173195|KCNIP2|30819|Kv channel interacting protein 2##NM_173197|KCNIP2|30819|Kv channel interacting protein 2##DQ148483|KCNIP2|30819|Kv channel interacting protein 2##AM392816|KCNIP2|30819|Kv channel interacting protein 2##AK027347|KCNIP2|30819|Kv channel interacting protein 2##AK301433|KCNIP2|30819|Kv channel interacting protein 2##NM_173194|KCNIP2|30819|Kv channel interacting protein 2##AL136722|KCNIP2|30819|Kv channel interacting protein 2##NM_001142434|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##NM_012215|MGEA5|10724|meningioma expressed antigen 5 (hyaluronidase)##BC032118|C10orf76|79591|chromosome 10 open reading frame 76##NM_024541|C10orf76|79591|chromosome 10 open reading frame 76##BC054882|C10orf76|79591|chromosome 10 open reading frame 76##NM_024747|HPS6|79803|Hermansky-Pudlak syndrome 6##BC014993|HPS6|79803|Hermansky-Pudlak syndrome 6##AF536238|HPS6|79803|Hermansky-Pudlak syndrome 6##BC011594|HPS6|79803|Hermansky-Pudlak syndrome 6##AK300588|LDB1|8861|LIM domain binding 1	0.0	
chr10	111517578	111517686	reg1035560.p1	3.432	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-2593256	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-3058573	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-5116587	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	165577	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	165645	-	NM_019903 AB209810 BC057285	248149	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.910401	CTCF.p2:2:0.910
chr12	72460833	72460914	reg1039213.p2	3.432	+	AY098914 NM_173353 BC114442 BC114499 AK094614	-128183	+	NM_001146213 NM_001146214 NM_022771 TSC_hg19_v1_chr12_+_72233538 AK022147 AK297626 AK307922 BC028352 AK225747 AL833639 AK225221 AK292306 AB449901	-227338	+	AB385582 AM393692 TSC_hg19_v1_chr12_+_72148987	-311925	+	TSC_hg19_v1_chr12_-_72666143 BC093901 BC093903	205305	-	AK095156 TSC_hg19_v1_chr12_-_72666355	205470	-	AF126372 TSC_hg19_v1_chr12_+_72666537 BC142706 BC150181 NM_013381 AY358765	205631	+	AY098914|TPH2|121278|tryptophan hydroxylase 2##NM_173353|TPH2|121278|tryptophan hydroxylase 2##BC114442|TPH2|121278|tryptophan hydroxylase 2##BC114499|TPH2|121278|tryptophan hydroxylase 2##AK094614|TPH2|121278|tryptophan hydroxylase 2##NM_001146213|TBC1D15|64786|TBC1 domain family, member 15##NM_001146214|TBC1D15|64786|TBC1 domain family, member 15##NM_022771|TBC1D15|64786|TBC1 domain family, member 15##AK022147|TBC1D15|64786|TBC1 domain family, member 15##AK297626|TBC1D15|64786|TBC1 domain family, member 15##AK307922|TBC1D15|64786|TBC1 domain family, member 15##BC028352|TBC1D15|64786|TBC1 domain family, member 15##AK225747|TBC1D15|64786|TBC1 domain family, member 15##AL833639|TBC1D15|64786|TBC1 domain family, member 15##AK225221|TBC1D15|64786|TBC1 domain family, member 15##AK292306|TBC1D15|64786|TBC1 domain family, member 15##AB449901|TBC1D15|64786|TBC1 domain family, member 15##AM393692|RAB21|23011|RAB21, member RAS oncogene family##BC093901|LOC283392|283392|uncharacterized LOC283392##BC093903|LOC283392|283392|uncharacterized LOC283392##AK095156|LOC283392|283392|uncharacterized LOC283392##AF126372|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC142706|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##BC150181|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##NM_013381|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme##AY358765|TRHDE|29953|thyrotropin-releasing hormone degrading enzyme	0.0	
chr1	40781804	40781905	reg1003718.p3	3.432	+	TSC_hg19_v1_chr1_+_40735749 AK027874	-46091	+	TSC_hg19_v1_chr1_+_40723926 EU176257 EU176564	-57917	+	TSC_hg19_v1_chr1_+_40723907 Y13834	-57946	+	M95610 AB590601 TSC_hg19_v1_chr1_-_40782905	1011	-	TSC_hg19_v1_chr1_-_40782958 BC136326 BC136327 NM_001852	1089	-	TSC_hg19_v1_chr1_-_40782992 BC041479	1166	-	AK027874|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##EU176257|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##EU176564|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##Y13834|ZMPSTE24|10269|zinc metallopeptidase (STE24 homolog, S. cerevisiae)##M95610|COL9A2|1298|collagen, type IX, alpha 2##BC136326|COL9A2|1298|collagen, type IX, alpha 2##BC136327|COL9A2|1298|collagen, type IX, alpha 2##NM_001852|COL9A2|1298|collagen, type IX, alpha 2##BC041479|COL9A2|1298|collagen, type IX, alpha 2	0.0	
chr1	51425979	51426082	reg1030094.p1	3.432	+	TSC_hg19_v1_chr1_-_51425930 BC004970 NM_007051	-97	-	TSC_hg19_v1_chr1_-_51425834 AK292840	-192	-	TSC_hg19_v1_chr1_-_51425796 AJ271408	-231	-	TSC_hg19_v1_chr1_+_51434315 AF041248 NM_001262	8272	+	TSC_hg19_v1_chr1_+_51434375 BC000598 BC005041	8362	+	TSC_hg19_v1_chr1_+_51434477 AK021794 BC017036	8448	+	BC004970|FAF1|11124|Fas (TNFRSF6) associated factor 1##NM_007051|FAF1|11124|Fas (TNFRSF6) associated factor 1##AK292840|FAF1|11124|Fas (TNFRSF6) associated factor 1##AJ271408|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF041248|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##NM_001262|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##BC000598|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##BC005041|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##AK021794|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)##BC017036|CDKN2C|1031|cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	0.0	
chr15	75063958	75064139	reg1000121.p2	3.432	+	TSC_hg19_v1_chr15_+_75041185 NM_000761 BC067424 BC067425 BC067426 BC067427 BC067428 BC067429	-22856	+	AK310810 AM233517 AM233518 AM233519 AM233520 AM236046 AM236047 BC023019 AY871801 K03191 AK223108 AK223113 AK313880 NM_000499	-46255	-	TSC_hg19_v1_chr15_-_74988360 BC011534 BC021271 AK056339 NM_001142443 NM_001142444 NM_025083	-75685	-	TSC_hg19_v1_chr15_+_75074420 BC106073 NM_001127190 NM_004383 AK290531	10377	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	10808	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	41124	+	NM_000761|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067424|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067425|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067426|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067427|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067428|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##BC067429|CYP1A2|1544|cytochrome P450, family 1, subfamily A, polypeptide 2##AK310810|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233517|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233518|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233519|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM233520|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236046|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AM236047|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC023019|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AY871801|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##K03191|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223108|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK223113|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##AK313880|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##NM_000499|CYP1A1|1543|cytochrome P450, family 1, subfamily A, polypeptide 1##BC011534|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC021271|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##AK056339|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142443|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_001142444|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##NM_025083|EDC3|80153|enhancer of mRNA decapping 3 homolog (S. cerevisiae)##BC106073|CSK|1445|c-src tyrosine kinase##NM_001127190|CSK|1445|c-src tyrosine kinase##NM_004383|CSK|1445|c-src tyrosine kinase##AK290531|CSK|1445|c-src tyrosine kinase##X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like	0.0	
chr16	17121182	17121363	reg1026075.p3	3.432	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-794742	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-794784	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-794790	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	443533	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1452119	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1676824	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr17	19366618	19366799	reg1031246.p2	3.432	+	AK309372 NM_007148 AK313844 AK226052 BC038896 BC053989 AB026054 AB590107 EU446727	-52104	+	L38486 TSC_hg19_v1_chr17_-_19290504 BC047725 AK293056 AK304528 NM_001198695 NM_002404	-76207	-	TSC_hg19_v1_chr17_+_19282061 AY534741 AB527827 HQ257997	-84573	+	AK301854 TSC_hg19_v1_chr17_+_19437179 AK222625 AK001709 AK302620 NM_018242 BC022390 AK225360 BC010661 BC058882 BC050592 CU691318	70486	+	U46689 TSC_hg19_v1_chr17_+_19552087 NM_000382 NM_001031806 AK292381 L47162 AK025677 AK315096 BC002430 DQ895880 EU176377 CR457422 AB208894	185435	+	BC062614 AB250364 AB250701 BC035288 BC050578 AK055758 AK307647 NM_001099646 NM_152908	253252	-	AK309372|RNF112|7732|ring finger protein 112##NM_007148|RNF112|7732|ring finger protein 112##AK313844|RNF112|7732|ring finger protein 112##AK226052|RNF112|7732|ring finger protein 112##BC038896|RNF112|7732|ring finger protein 112##BC053989|RNF112|7732|ring finger protein 112##AB026054|RNF112|7732|ring finger protein 112##EU446727|RNF112|7732|ring finger protein 112##L38486|MFAP4|4239|microfibrillar-associated protein 4##BC047725|MFAP4|4239|microfibrillar-associated protein 4##AK293056|MFAP4|4239|microfibrillar-associated protein 4##AK304528|MFAP4|4239|microfibrillar-associated protein 4##NM_001198695|MFAP4|4239|microfibrillar-associated protein 4##NM_002404|MFAP4|4239|microfibrillar-associated protein 4##AY534741|MAPK7|5598|mitogen-activated protein kinase 7##HQ257997|MAPK7|5598|mitogen-activated protein kinase 7##AK301854|SLC47A1|55244|solute carrier family 47, member 1##AK222625|SLC47A1|55244|solute carrier family 47, member 1##AK001709|SLC47A1|55244|solute carrier family 47, member 1##AK302620|SLC47A1|55244|solute carrier family 47, member 1##NM_018242|SLC47A1|55244|solute carrier family 47, member 1##AK225360|SLC47A1|55244|solute carrier family 47, member 1##BC010661|SLC47A1|55244|solute carrier family 47, member 1##BC058882|SLC47A1|55244|solute carrier family 47, member 1##BC050592|SLC47A1|55244|solute carrier family 47, member 1##U46689|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_000382|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##NM_001031806|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK292381|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##L47162|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK025677|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AK315096|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC002430|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##DQ895880|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##EU176377|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##CR457422|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##AB208894|ALDH3A2|224|aldehyde dehydrogenase 3 family, member A2##BC062614|SLC47A2|146802|solute carrier family 47, member 2##AB250364|SLC47A2|146802|solute carrier family 47, member 2##AB250701|SLC47A2|146802|solute carrier family 47, member 2##BC035288|SLC47A2|146802|solute carrier family 47, member 2##BC050578|SLC47A2|146802|solute carrier family 47, member 2##AK055758|SLC47A2|146802|solute carrier family 47, member 2##AK307647|SLC47A2|146802|solute carrier family 47, member 2##NM_001099646|SLC47A2|146802|solute carrier family 47, member 2##NM_152908|SLC47A2|146802|solute carrier family 47, member 2	0.0	
chr20	37554998	37555174	reg1003957.p2	3.432	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-18	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-97	+	TSC_hg19_v1_chr20_+_37434351 AB020630 BC152467 NM_001172735 NM_015568 AK311244 BC131801	-120732	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	35903	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1762791	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	2102408	+	AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##AB020630|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC152467|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001172735|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_015568|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##BC131801|PPP1R16B|26051|protein phosphatase 1, regulatory subunit 16B##NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I	0.0	
chr20	5590738	5590918	reg1024257.p1	3.432	+	AB084081 AF506288 EF577398 NM_144773 AB385531 BC104959 BC104961	-295792	-	TSC_hg19_v1_chr20_+_5107653 AK091045 AK001414 BC025751 AK027695 AB529066 DQ891643 DQ894832	-483133	+	TSC_hg19_v1_chr20_+_5107615 NM_003818 AK315489 Y16521 AK304763	-483306	+	TSC_hg19_v1_chr20_-_5591598 AB037855 AK308111 BC027588 NM_019593	759	-	TSC_hg19_v1_chr20_+_5731046 AK057796 BC035800 NM_152504 AK292708 AK310715	140238	+	NM_001819 TSC_hg19_v1_chr20_+_5892155 AK289386 AK312237 AK225125 AK293536 Y00064 BC000375 AB209712 AB385015 DQ891415 EU176635 EU831479 EU831566 CR456726	301298	+	AB084081|PROKR2|128674|prokineticin receptor 2##AF506288|PROKR2|128674|prokineticin receptor 2##EF577398|PROKR2|128674|prokineticin receptor 2##NM_144773|PROKR2|128674|prokineticin receptor 2##BC104959|PROKR2|128674|prokineticin receptor 2##BC104961|PROKR2|128674|prokineticin receptor 2##AK091045|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK001414|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##BC025751|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK027695|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ891643|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##DQ894832|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##NM_003818|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK315489|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##Y16521|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AK304763|CDS2|8760|CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2##AB037855|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK308111|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##BC027588|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##NM_019593|GPCPD1|56261|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)##AK057796|C20orf196|149840|chromosome 20 open reading frame 196##BC035800|C20orf196|149840|chromosome 20 open reading frame 196##NM_152504|C20orf196|149840|chromosome 20 open reading frame 196##AK292708|C20orf196|149840|chromosome 20 open reading frame 196##NM_001819|CHGB|1114|chromogranin B (secretogranin 1)##AK289386|CHGB|1114|chromogranin B (secretogranin 1)##AK312237|CHGB|1114|chromogranin B (secretogranin 1)##AK225125|CHGB|1114|chromogranin B (secretogranin 1)##AK293536|CHGB|1114|chromogranin B (secretogranin 1)##Y00064|CHGB|1114|chromogranin B (secretogranin 1)##BC000375|CHGB|1114|chromogranin B (secretogranin 1)##AB209712|CHGB|1114|chromogranin B (secretogranin 1)##DQ891415|CHGB|1114|chromogranin B (secretogranin 1)##EU176635|CHGB|1114|chromogranin B (secretogranin 1)##EU831479|CHGB|1114|chromogranin B (secretogranin 1)##EU831566|CHGB|1114|chromogranin B (secretogranin 1)##CR456726|CHGB|1114|chromogranin B (secretogranin 1)	0.012799	
chr2	136777096	136777187	reg1042793.p2	3.432	+	TSC_hg19_v1_chr2_-_136743191 AK129521 NM_001349	-33925	-	TSC_hg19_v1_chr2_-_136743143 AK222476 BC000629 AK290607 J05032	-34012	-	BT006710 CU674308 DQ890741 DQ893912 TSC_hg19_v1_chr2_-_136743053 CR749809 BC107749 AY762100	-34086	-	AK309641 NM_001008540 TSC_hg19_v1_chr2_-_136873857	96657	-	AF025375 AY242129 BT006660 EU831811 EU831888 L01639 AF348491 BC020968 L06797 X71635 D10924 M99293 AK129916 AK296674 AK312244 D28433 TSC_hg19_v1_chr2_-_136875720 NM_003467	98535	-	TSC_hg19_v1_chr2_+_137523114 AK299929	745975	+	AK129521|DARS|1615|aspartyl-tRNA synthetase##NM_001349|DARS|1615|aspartyl-tRNA synthetase##AK222476|DARS|1615|aspartyl-tRNA synthetase##BC000629|DARS|1615|aspartyl-tRNA synthetase##AK290607|DARS|1615|aspartyl-tRNA synthetase##J05032|DARS|1615|aspartyl-tRNA synthetase##BT006710|DARS|1615|aspartyl-tRNA synthetase##DQ890741|DARS|1615|aspartyl-tRNA synthetase##DQ893912|DARS|1615|aspartyl-tRNA synthetase##CR749809|DARS|1615|aspartyl-tRNA synthetase##BC107749|DARS|1615|aspartyl-tRNA synthetase##AY762100|DARS|1615|aspartyl-tRNA synthetase##NM_001008540|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF025375|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AY242129|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BT006660|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831811|CXCR4|7852|chemokine (C-X-C motif) receptor 4##EU831888|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L01639|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AF348491|CXCR4|7852|chemokine (C-X-C motif) receptor 4##BC020968|CXCR4|7852|chemokine (C-X-C motif) receptor 4##L06797|CXCR4|7852|chemokine (C-X-C motif) receptor 4##X71635|CXCR4|7852|chemokine (C-X-C motif) receptor 4##D10924|CXCR4|7852|chemokine (C-X-C motif) receptor 4##M99293|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK129916|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK296674|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK312244|CXCR4|7852|chemokine (C-X-C motif) receptor 4##NM_003467|CXCR4|7852|chemokine (C-X-C motif) receptor 4##AK299929|THSD7B|80731|thrombospondin, type I, domain containing 7B	0.0	
chr2	238512528	238512643	reg1034866.p2	3.432	+	BC023661 AK225423 AK022600 NM_022449	-12845	-	TSC_hg19_v1_chr2_-_238499327 BC009827 BC050426 AL136645	-13239	-	AB015419 BC069081 BC069284 NM_015893	-37369	+	TSC_hg19_v1_chr2_+_238536229 NM_001137550 AF115510	23774	+	TSC_hg19_v1_chr2_+_238600798 BC018883 BC019335 NM_001137551 NM_001137552 NM_001137553 NM_004735	88222	+	TSC_hg19_v1_chr2_+_238600975 AJ223075 BC001385 AK298270 U69609 BC108913 BC108914 AK307485	88358	+	BC023661|RAB17|64284|RAB17, member RAS oncogene family##AK225423|RAB17|64284|RAB17, member RAS oncogene family##AK022600|RAB17|64284|RAB17, member RAS oncogene family##NM_022449|RAB17|64284|RAB17, member RAS oncogene family##BC009827|RAB17|64284|RAB17, member RAS oncogene family##BC050426|RAB17|64284|RAB17, member RAS oncogene family##AL136645|RAB17|64284|RAB17, member RAS oncogene family##AB015419|PRLH|51052|prolactin releasing hormone##BC069081|PRLH|51052|prolactin releasing hormone##BC069284|PRLH|51052|prolactin releasing hormone##NM_015893|PRLH|51052|prolactin releasing hormone##NM_001137550|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AF115510|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC018883|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC019335|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137551|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137552|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_001137553|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##NM_004735|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AJ223075|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC001385|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK298270|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##U69609|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108913|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##BC108914|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1##AK307485|LRRFIP1|9208|leucine rich repeat (in FLII) interacting protein 1	0.0	
chr22	39855848	39855932	reg1036809.p2	3.432	+	TSC_hg19_v1_chr22_+_39853534 BC075025 BC075026 BC113383 BC113718	-2354	+	TSC_hg19_v1_chr22_+_39853325 NM_002409	-2570	+	TSC_hg19_v1_chr22_+_39795812 AK291668 AK316004 AK308903 AB591024 CU690722	-60079	+	NM_001098270 AK313664 CR456519 D13789 AB463105 CU013119 CU013407 HQ258450	27400	+	TSC_hg19_v1_chr22_+_39898257 NM_019008	42375	+	TSC_hg19_v1_chr22_+_39898332 AL834205	42420	+	BC075025|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC075026|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113383|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##BC113718|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_002409|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK291668|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK316004|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##AK308903|TAB1|10454|TGF-beta activated kinase 1/MAP3K7 binding protein 1##NM_001098270|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##AK313664|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CR456519|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##D13789|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013119|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##CU013407|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##HQ258450|MGAT3|4248|mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase##NM_019008|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like##AL834205|SMCR7L|54471|Smith-Magenis syndrome chromosome region, candidate 7-like	0.0	
chr2	242816026	242816092	reg1033716.p1	3.432	+	AK090909 AX746675 BC113517 BC113519 NM_173821	-4177	+	AY238517 AB590949 AY322430 BC074740 NM_005018 U64863 AK313848	-15035	-	AK091038 AX746745 NM_001167599 NM_001167602 NM_080741 BC012899	-64009	+	AK309231 TSC_hg19_v1_chr2_+_243030843 AK298283 AK307199	214800	+	None	None	None	None	None	None	AK090909|CXXC11|285093|CXXC finger protein 11##BC113517|CXXC11|285093|CXXC finger protein 11##BC113519|CXXC11|285093|CXXC finger protein 11##NM_173821|CXXC11|285093|CXXC finger protein 11##AY238517|PDCD1|5133|programmed cell death 1##AY322430|PDCD1|5133|programmed cell death 1##BC074740|PDCD1|5133|programmed cell death 1##NM_005018|PDCD1|5133|programmed cell death 1##U64863|PDCD1|5133|programmed cell death 1##AK313848|PDCD1|5133|programmed cell death 1##AK091038|NEU4|129807|sialidase 4##NM_001167599|NEU4|129807|sialidase 4##NM_001167602|NEU4|129807|sialidase 4##NM_080741|NEU4|129807|sialidase 4##BC012899|NEU4|129807|sialidase 4##AK298283|LOC728323|728323|uncharacterized LOC728323	0.01088	
chr2	32437542	32437626	reg1043438.p1	3.432	+	TSC_hg19_v1_chr2_+_32390932 NM_001193513 NM_001193514 NM_001193515 NM_017964 AK055663 AK096672 AK127716 AK304225 BC066903 EF560719 EF560726 AL832755 AF173387	-46655	+	TSC_hg19_v1_chr2_+_32288665 AB029006 BC150260 NM_014946 NM_199436 AJ246001	-148884	+	TSC_hg19_v1_chr2_-_32264863 AF226998 NM_032574 AK295755 BC015970	-172716	-	AY358152 BC031555 AK292673 AK314762 AK095467 NM_001199138	52345	-	AY035391 NM_001199139 AY027787 AY027788 AY027789 AY027790 NM_021209 AF376061	53221	-	TSC_hg19_v1_chr2_+_32502966 NM_032312	65378	+	NM_001193513|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##NM_001193514|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##NM_001193515|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##NM_017964|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AK055663|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AK096672|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AK127716|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AK304225|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##BC066903|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##EF560719|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##EF560726|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AL832755|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AF173387|SLC30A6|55676|solute carrier family 30 (zinc transporter), member 6##AB029006|SPAST|6683|spastin##BC150260|SPAST|6683|spastin##NM_014946|SPAST|6683|spastin##NM_199436|SPAST|6683|spastin##AJ246001|SPAST|6683|spastin##AF226998|DPY30|84661|dpy-30 homolog (C. elegans)##NM_032574|DPY30|84661|dpy-30 homolog (C. elegans)##BC015970|DPY30|84661|dpy-30 homolog (C. elegans)##AY358152|NLRC4|58484|NLR family, CARD domain containing 4##BC031555|NLRC4|58484|NLR family, CARD domain containing 4##AK292673|NLRC4|58484|NLR family, CARD domain containing 4##AK314762|NLRC4|58484|NLR family, CARD domain containing 4##AK095467|NLRC4|58484|NLR family, CARD domain containing 4##NM_001199138|NLRC4|58484|NLR family, CARD domain containing 4##AY035391|NLRC4|58484|NLR family, CARD domain containing 4##NM_001199139|NLRC4|58484|NLR family, CARD domain containing 4##AY027787|NLRC4|58484|NLR family, CARD domain containing 4##AY027788|NLRC4|58484|NLR family, CARD domain containing 4##AY027789|NLRC4|58484|NLR family, CARD domain containing 4##AY027790|NLRC4|58484|NLR family, CARD domain containing 4##NM_021209|NLRC4|58484|NLR family, CARD domain containing 4##AF376061|NLRC4|58484|NLR family, CARD domain containing 4##NM_032312|YIPF4|84272|Yip1 domain family, member 4	0.370933	CTCF.p2:3:0.371
chr3	10262412	10262592	reg1028751.p1	3.432	+	NM_001570 BC125184 AK299033 AK312841 TSC_hg19_v1_chr3_+_10206602 AF026273 AB587544 AJ496794	-55902	+	TSC_hg19_v1_chr3_+_10183517 AB528056	-78964	+	AK304002 TSC_hg19_v1_chr3_+_10183487	-79004	+	TSC_hg19_v1_chr3_+_10290182 NM_014760	27673	+	TSC_hg19_v1_chr3_+_10290210 D86972	27760	+	TSC_hg19_v1_chr3_+_10290370 AK289794 BC090935 BC101776 BC101770	28020	+	NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2##BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK304002|VHL|7428|von Hippel-Lindau tumor suppressor##NM_014760|TATDN2|9797|TatD DNase domain containing 2##D86972|TATDN2|9797|TatD DNase domain containing 2##AK289794|TATDN2|9797|TatD DNase domain containing 2##BC090935|TATDN2|9797|TatD DNase domain containing 2##BC101776|TATDN2|9797|TatD DNase domain containing 2##BC101770|TATDN2|9797|TatD DNase domain containing 2	0.0	
chr7	149439585	149439714	reg1003502.p2	3.432	+	TSC_hg19_v1_chr7_+_149412043 BC142722 BC146667 AB058765 BC150330 BC152409 NM_032534	-27562	+	TSC_hg19_v1_chr7_-_149321856 BC047675	-117795	-	AB590454 AK295771 TSC_hg19_v1_chr7_-_149321793 AK022762	-117907	-	BC052625 NM_207336 BC038972	30651	-	NM_198455	33481	+	BC092506 TSC_hg19_v1_chr7_+_149535500 AK054924	95841	+	BC142722|KRBA1|84626|KRAB-A domain containing 1##BC146667|KRBA1|84626|KRAB-A domain containing 1##AB058765|KRBA1|84626|KRAB-A domain containing 1##BC150330|KRBA1|84626|KRAB-A domain containing 1##BC152409|KRBA1|84626|KRAB-A domain containing 1##NM_032534|KRBA1|84626|KRAB-A domain containing 1##BC047675|ZNF767|79970|zinc finger family member 767##AK295771|ZNF767|79970|zinc finger family member 767##AK022762|ZNF767|79970|zinc finger family member 767##BC052625|ZNF467|168544|zinc finger protein 467##NM_207336|ZNF467|168544|zinc finger protein 467##BC038972|ZNF467|168544|zinc finger protein 467##NM_198455|SSPO|23145|SCO-spondin homolog (Bos taurus)##BC092506|ZNF862|643641|zinc finger protein 862##AK054924|ZNF862|643641|zinc finger protein 862	0.012507	
chr1	117099235	117099340	reg1041607.p1	3.431	+	TSC_hg19_v1_chr1_-_116961216 AK309389	-138049	-	TSC_hg19_v1_chr1_-_116961205 BC007373 BC018892 BC028281 BC069003 AK309872 BC098428	-138097	-	AK296362 NM_001160234	-173296	+	BT019816 BT019817 CR456939 AB590613 Y00636 TSC_hg19_v1_chr1_-_117113615 X06296	14328	-	TSC_hg19_v1_chr1_-_117113649 AK291980 BC005930 NM_001144822 NM_001779	14390	-	TSC_hg19_v1_chr1_-_117210323 NM_001007237 NM_001542 BC110651	111096	-	AK309389|ATP1A1OS|84852|ATP1A1 opposite strand##BC007373|ATP1A1OS|84852|ATP1A1 opposite strand##BC018892|ATP1A1OS|84852|ATP1A1 opposite strand##BC028281|ATP1A1OS|84852|ATP1A1 opposite strand##BC069003|ATP1A1OS|84852|ATP1A1 opposite strand##AK309872|ATP1A1OS|84852|ATP1A1 opposite strand##BC098428|ATP1A1OS|84852|ATP1A1 opposite strand##AK296362|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##NM_001160234|ATP1A1|476|ATPase, Na+/K+ transporting, alpha 1 polypeptide##BT019816|CD58|965|CD58 molecule##BT019817|CD58|965|CD58 molecule##CR456939|CD58|965|CD58 molecule##Y00636|CD58|965|CD58 molecule##X06296|CD58|965|CD58 molecule##AK291980|CD58|965|CD58 molecule##BC005930|CD58|965|CD58 molecule##NM_001144822|CD58|965|CD58 molecule##NM_001779|CD58|965|CD58 molecule##NM_001007237|IGSF3|3321|immunoglobulin superfamily, member 3##NM_001542|IGSF3|3321|immunoglobulin superfamily, member 3##BC110651|IGSF3|3321|immunoglobulin superfamily, member 3	0.0	
chr13	21635338	21635428	reg1028466.p1	3.431	+	TSC_hg19_v1_chr13_-_21476909 NM_022459	-158446	-	BC050680 AB051508 AB384273 AK057924 BC098402 TSC_hg19_v1_chr13_-_21476886 AK302760	-158513	-	TSC_hg19_v1_chr13_-_21348081 AK055408 AK316604	-287296	-	TSC_hg19_v1_chr13_-_21635685 BC127671 AF207547 AB209897 BC071572	282	-	TSC_hg19_v1_chr13_-_21635719 NM_014572	333	-	NM_005870 TSC_hg19_v1_chr13_+_21714679	79284	+	NM_022459|XPO4|64328|exportin 4##BC050680|XPO4|64328|exportin 4##AB051508|XPO4|64328|exportin 4##AK057924|XPO4|64328|exportin 4##BC098402|XPO4|64328|exportin 4##AK302760|XPO4|64328|exportin 4##AK316604|N6AMT2|221143|N-6 adenine-specific DNA methyltransferase 2 (putative)##BC127671|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AF207547|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##AB209897|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##BC071572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##NM_014572|LATS2|26524|LATS, large tumor suppressor, homolog 2 (Drosophila)##NM_005870|SAP18|10284|Sin3A-associated protein, 18kDa	0.0	
chr13	41495582	41495702	reg1034861.p1	3.431	+	AF177333 TSC_hg19_v1_chr13_+_41363756	-131876	+	TSC_hg19_v1_chr13_+_41363716 AK313602 AK296862 AF112968	-131958	+	NM_014252 TSC_hg19_v1_chr13_+_41363596 BC002702	-132053	+	TSC_hg19_v1_chr13_-_41495877 AK096993 BC047078 BC020814	223	-	DQ891709 DQ894886 AB385566 CU688886 TSC_hg19_v1_chr13_-_41556203	60554	-	AK304289 BC010575 BC030507 NM_001145353	60746	-	AF177333|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK313602|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK296862|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AF112968|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##NM_014252|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##BC002702|SLC25A15|10166|solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15##AK096993|LOC100616668|100616668|TPTE2 pseudogene##BC047078|LOC100616668|100616668|TPTE2 pseudogene##BC020814|SUGT1P3|283507|suppressor of G2 allele of SKP1 (S. cerevisiae) pseudogene 3##DQ891709|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##DQ894886|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##AK304289|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##BC010575|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##BC030507|ELF1|1997|E74-like factor 1 (ets domain transcription factor)##NM_001145353|ELF1|1997|E74-like factor 1 (ets domain transcription factor)	0.0	
chr1	38512867	38512954	reg1042122.p1	3.431	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-461	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-34480	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-34525	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	812476	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	826106	-	AK312811 BC051675 AK123051 NM_030772	834367	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.0	
chr14	52244734	52244834	reg1045317.p1	3.431	+	TSC_hg19_v1_chr14_+_52118627 BX161430 NM_152330 BC020521 AK315764 AK055545 BX647863	-126154	+	AL833158 NM_001042481	-288930	+	NM_030755 AB048246 TSC_hg19_v1_chr14_+_51706980 AK302416 BC036460 BC016769 BC050366 AK075395 BC032834 AK303134 AL080080 BC056874 AY358640 AK312905 DQ891674 DQ894860 CU690352	-537835	+	NM_001243773 NM_001243774 NM_053064 AK092371	82292	+	TSC_hg19_v1_chr14_+_52327329 AK307171	82539	+	AK001024 AK311334 TSC_hg19_v1_chr14_+_52327363	82580	+	BX161430|FRMD6|122786|FERM domain containing 6##NM_152330|FRMD6|122786|FERM domain containing 6##BC020521|FRMD6|122786|FERM domain containing 6##AK315764|FRMD6|122786|FERM domain containing 6##AK055545|FRMD6|122786|FERM domain containing 6##BX647863|FRMD6|122786|FERM domain containing 6##AL833158|FRMD6|122786|FERM domain containing 6##NM_001042481|FRMD6|122786|FERM domain containing 6##NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1##AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1##BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1##BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1##BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1##AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1##BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1##AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1##AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1##BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1##AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1##AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1##NM_001243773|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_001243774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	0.0	
chr15	68502474	68502605	reg1009565.p2	3.431	+	TSC_hg19_v1_chr15_-_68498423 BX640817 NM_001031733 NM_033429	-4123	-	TSC_hg19_v1_chr15_-_68497633 BX640702 BC009516 AK092628 AK296804 AX747637	-4902	-	TSC_hg19_v1_chr15_+_68346659 BC053685 AB590990 AF077951 EF487997 EF487998 FJ997900 AY826819	-155878	+	CR457244 DQ891480 EU176598 BC013130 BC010849 TSC_hg19_v1_chr15_-_68522011 AK291175 AK293155 AK000568 AK027604 NM_017882	19467	-	TSC_hg19_v1_chr15_+_68570141 BC010122 BC014558 NM_015322	67554	+	TSC_hg19_v1_chr15_+_68570434 AK290167	67885	+	BX640817|CALML4|91860|calmodulin-like 4##NM_001031733|CALML4|91860|calmodulin-like 4##NM_033429|CALML4|91860|calmodulin-like 4##BX640702|CALML4|91860|calmodulin-like 4##BC009516|CALML4|91860|calmodulin-like 4##AK092628|CALML4|91860|calmodulin-like 4##AK296804|CALML4|91860|calmodulin-like 4##BC053685|PIAS1|8554|protein inhibitor of activated STAT, 1##AF077951|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487997|PIAS1|8554|protein inhibitor of activated STAT, 1##EF487998|PIAS1|8554|protein inhibitor of activated STAT, 1##FJ997900|PIAS1|8554|protein inhibitor of activated STAT, 1##AY826819|PIAS1|8554|protein inhibitor of activated STAT, 1##CR457244|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##DQ891480|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##EU176598|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC013130|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC010849|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK291175|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK293155|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK000568|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##AK027604|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##NM_017882|CLN6|54982|ceroid-lipofuscinosis, neuronal 6, late infantile, variant##BC010122|FEM1B|10116|fem-1 homolog b (C. elegans)##BC014558|FEM1B|10116|fem-1 homolog b (C. elegans)##NM_015322|FEM1B|10116|fem-1 homolog b (C. elegans)##AK290167|FEM1B|10116|fem-1 homolog b (C. elegans)	0.0	
chr16	72698973	72699048	reg1034019.p1	3.431	+	AK122925 NM_001160213	-492662	-	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	-492967	-	NM_001142318	-570796	-	TSC_hg19_v1_chr16_+_72699031 AK021563	54	+	TSC_hg19_v1_chr16_-_72991733 BC029653	292695	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	383211	-	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001142318|TXNL4B|54957|thioredoxin-like 4B##BC029653|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3	0.0	
chr18	51654399	51654579	reg1016010.p2	3.431	+	TSC_hg19_v1_chr18_+_49867069 M32292 AB527335 X76132	-1787376	+	NM_005215 TSC_hg19_v1_chr18_+_49866541	-1787948	+	TSC_hg19_v1_chr18_-_48724033 NM_016626	-2930449	-	TSC_hg19_v1_chr18_-_51690988 AL110266	36503	-	AF072246 TSC_hg19_v1_chr18_-_51750614	96048	-	TSC_hg19_v1_chr18_-_51750997 BC032638	96476	-	M32292|DCC|1630|deleted in colorectal carcinoma##X76132|DCC|1630|deleted in colorectal carcinoma##NM_005215|DCC|1630|deleted in colorectal carcinoma##NM_016626|MEX3C|51320|mex-3 homolog C (C. elegans)##AL110266|MBD2|8932|methyl-CpG binding domain protein 2##AF072246|MBD2|8932|methyl-CpG binding domain protein 2##BC032638|MBD2|8932|methyl-CpG binding domain protein 2	0.0	
chr19	12111654	12111721	reg1039035.p2	3.431	+	AK092240 AK299224 AX747424 NM_001012753 BC105711 BC105712 BC105713	-35805	+	TSC_hg19_v1_chr19_+_12035889 AK299182 AK308305 AL136732 NM_144566 BC144406 BC136777	-75769	+	TSC_hg19_v1_chr19_+_11998643 BC051309 NM_021915 EU446913	-113014	+	TSC_hg19_v1_chr19_-_12146492 AK129553 BC047412	34802	-	TSC_hg19_v1_chr19_-_12146530 AK098300 NM_001080411	34854	-	NM_001080404	52094	-	AK092240|ZNF763|284390|zinc finger protein 763##AK299224|ZNF763|284390|zinc finger protein 763##NM_001012753|ZNF763|284390|zinc finger protein 763##BC105711|ZNF763|284390|zinc finger protein 763##BC105712|ZNF763|284390|zinc finger protein 763##BC105713|ZNF763|284390|zinc finger protein 763##AK299182|ZNF763|284390|zinc finger protein 763##AK308305|ZNF700|90592|zinc finger protein 700##AL136732|ZNF700|90592|zinc finger protein 700##NM_144566|ZNF700|90592|zinc finger protein 700##BC144406|ZNF700|90592|zinc finger protein 700##BC136777|ZNF700|90592|zinc finger protein 700##BC051309|ZNF69|7620|zinc finger protein 69##NM_021915|ZNF69|7620|zinc finger protein 69##EU446913|ZNF69|7620|zinc finger protein 69##BC047412|ZNF433|163059|zinc finger protein 433##AK098300|ZNF433|163059|zinc finger protein 433##NM_001080411|ZNF433|163059|zinc finger protein 433##NM_001080404|ZNF878|729747|zinc finger protein 878	0.0	
chr21	44775818	44775925	reg1025642.p1	3.431	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-186697	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-248187	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-248246	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	70118	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	71124	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	303491	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr2	199764609	199764706	reg1026601.p1	3.431	+	TSC_hg19_v1_chr2_+_198669316 AK127514 NM_006226	-1095287	+	NM_197970 AK302817	-1113671	-	AF272858 BC033674 AK098824 AK058099 NM_033030	-1114617	-	TSC_hg19_v1_chr2_-_200213802 AK025127	449193	-	TSC_hg19_v1_chr2_-_200320780 EU446695 BC098136 BC099723 BC103492 BC103500	556145	-	TSC_hg19_v1_chr2_-_200322238 AJ438951	557593	-	AK127514|PLCL1|5334|phospholipase C-like 1##NM_006226|PLCL1|5334|phospholipase C-like 1##NM_197970|BOLL|66037|bol, boule-like (Drosophila)##AK302817|BOLL|66037|bol, boule-like (Drosophila)##AF272858|BOLL|66037|bol, boule-like (Drosophila)##BC033674|BOLL|66037|bol, boule-like (Drosophila)##AK098824|BOLL|66037|bol, boule-like (Drosophila)##AK058099|BOLL|66037|bol, boule-like (Drosophila)##NM_033030|BOLL|66037|bol, boule-like (Drosophila)##AK025127|SATB2|23314|SATB homeobox 2##EU446695|SATB2|23314|SATB homeobox 2##BC098136|SATB2|23314|SATB homeobox 2##BC099723|SATB2|23314|SATB homeobox 2##BC103492|SATB2|23314|SATB homeobox 2##BC103500|SATB2|23314|SATB homeobox 2##AJ438951|SATB2|23314|SATB homeobox 2	0.033215	
chr2	235392284	235392352	reg1019398.p1	3.431	+	AJ308099 NM_006944 BC069401 BC106705 BC112438 BC113972 U20530	-432931	+	AY090109 NM_024080 BC126342 BC143819	-566273	+	TSC_hg19_v1_chr2_-_234777033 AK301707	-615281	-	NM_005737 TSC_hg19_v1_chr2_-_235405698 BC089043	13401	-	BC057396 TSC_hg19_v1_chr2_+_235860669 NM_014521 DQ232895 AK291209 AF147747	468340	+	TSC_hg19_v1_chr2_+_236402701 NM_001037131 NM_001244888 NM_014914 BC060814 BC167157 AB029022 BC167153 AY033765	1010485	+	AJ308099|SPP2|6694|secreted phosphoprotein 2, 24kDa##NM_006944|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC069401|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC106705|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC112438|SPP2|6694|secreted phosphoprotein 2, 24kDa##BC113972|SPP2|6694|secreted phosphoprotein 2, 24kDa##U20530|SPP2|6694|secreted phosphoprotein 2, 24kDa##AY090109|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##NM_024080|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC126342|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##BC143819|TRPM8|79054|transient receptor potential cation channel, subfamily M, member 8##AK301707|MSL3P1|151507|male-specific lethal 3 homolog (Drosophila) pseudogene 1##NM_005737|ARL4C|10123|ADP-ribosylation factor-like 4C##BC089043|ARL4C|10123|ADP-ribosylation factor-like 4C##BC057396|SH3BP4|23677|SH3-domain binding protein 4##NM_014521|SH3BP4|23677|SH3-domain binding protein 4##DQ232895|SH3BP4|23677|SH3-domain binding protein 4##AK291209|SH3BP4|23677|SH3-domain binding protein 4##AF147747|SH3BP4|23677|SH3-domain binding protein 4##NM_001037131|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_001244888|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##NM_014914|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC060814|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167157|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AB029022|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##BC167153|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1##AY033765|AGAP1|116987|ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	0.0	
chr2	30429710	30429802	reg1041122.p1	3.431	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-59880	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	-59923	+	NM_001127399 NM_001127400 NM_001127401 NM_016061 TSC_hg19_v1_chr2_+_30369786	-59986	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	24746	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	240392	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	600537	-	AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127399|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127400|YPEL5|51646|yippee-like 5 (Drosophila)##NM_001127401|YPEL5|51646|yippee-like 5 (Drosophila)##NM_016061|YPEL5|51646|yippee-like 5 (Drosophila)##AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13	0.782099	CTCF.p2:0:0.782
chr3	149693862	149693976	reg1042414.p1	3.431	+	BC012363 TSC_hg19_v1_chr3_+_149689094	-4839	+	TSC_hg19_v1_chr3_-_149688960 BC043646	-4990	-	TSC_hg19_v1_chr3_-_149688683 AB464068 AF228738 EU832616 EU832688 AK311782 L10678 BC002964 BC095444 AK307227 AK311780 BC018049 AK297915 NM_002628 NM_053024	-5223	-	TSC_hg19_v1_chr3_+_150126084 AK297383 AB014569	432153	+	TSC_hg19_v1_chr3_+_150126774 BC044643 NM_014779	432844	+	X75694 CR533472 TSC_hg19_v1_chr3_-_150264030	570051	-	BC012363|LOC646903|646903|uncharacterized LOC646903##BC043646|PFN2|5217|profilin 2##AF228738|PFN2|5217|profilin 2##EU832616|PFN2|5217|profilin 2##EU832688|PFN2|5217|profilin 2##AK311782|PFN2|5217|profilin 2##L10678|PFN2|5217|profilin 2##BC002964|PFN2|5217|profilin 2##BC095444|PFN2|5217|profilin 2##AK307227|PFN2|5217|profilin 2##AK311780|PFN2|5217|profilin 2##BC018049|PFN2|5217|profilin 2##AK297915|PFN2|5217|profilin 2##NM_002628|PFN2|5217|profilin 2##NM_053024|PFN2|5217|profilin 2##AK297383|TSC22D2|9819|TSC22 domain family, member 2##AB014569|TSC22D2|9819|TSC22 domain family, member 2##BC044643|TSC22D2|9819|TSC22 domain family, member 2##NM_014779|TSC22D2|9819|TSC22 domain family, member 2##X75694|SERP1|27230|stress-associated endoplasmic reticulum protein 1##CR533472|SERP1|27230|stress-associated endoplasmic reticulum protein 1	0.66491	CTCF.p2:-2:0.665
chr4	140572642	140572822	reg1003611.p1	3.431	+	AF462150 TSC_hg19_v1_chr4_-_140477374 AB385499 BC066361 AK310856 BC121055 BC121056 AB051504 AF448510 NM_030648	-95299	-	AL136904 NM_031296	-197772	+	TSC_hg19_v1_chr4_-_140374867 AK097885	-197858	-	NM_001204366 NM_001204367 NM_001204368 NM_002413 TSC_hg19_v1_chr4_+_140587003 AK130948 BC025416	14258	+	AK307231 TSC_hg19_v1_chr4_+_140587164 U77604 CR407640 DQ893384 DQ896704	14402	+	AK296891 TSC_hg19_v1_chr4_-_141074443 AB463106 BC137130 BC137131 AK123604	501606	-	AF462150|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC066361|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AK310856|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121055|SETD7|80854|SET domain containing (lysine methyltransferase) 7##BC121056|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AB051504|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AF448510|SETD7|80854|SET domain containing (lysine methyltransferase) 7##NM_030648|SETD7|80854|SET domain containing (lysine methyltransferase) 7##AL136904|RAB33B|83452|RAB33B, member RAS oncogene family##NM_031296|RAB33B|83452|RAB33B, member RAS oncogene family##NM_001204366|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204367|MGST2|4258|microsomal glutathione S-transferase 2##NM_001204368|MGST2|4258|microsomal glutathione S-transferase 2##NM_002413|MGST2|4258|microsomal glutathione S-transferase 2##AK130948|MGST2|4258|microsomal glutathione S-transferase 2##BC025416|MGST2|4258|microsomal glutathione S-transferase 2##AK307231|MGST2|4258|microsomal glutathione S-transferase 2##U77604|MGST2|4258|microsomal glutathione S-transferase 2##CR407640|MGST2|4258|microsomal glutathione S-transferase 2##DQ893384|MGST2|4258|microsomal glutathione S-transferase 2##DQ896704|MGST2|4258|microsomal glutathione S-transferase 2##AK296891|MAML3|55534|mastermind-like 3 (Drosophila)##BC137130|MAML3|55534|mastermind-like 3 (Drosophila)##BC137131|MAML3|55534|mastermind-like 3 (Drosophila)##AK123604|MAML3|55534|mastermind-like 3 (Drosophila)	0.0	
chr7	34799274	34799398	reg1041233.p1	3.431	+	TSC_hg19_v1_chr7_+_34697827 AK172847 AY310326 AY310327 AY310328 AY310329 AY310330 AY310331 AY310332 NM_207172 NM_207173 BC132693 BC132695 BC144380 AY956446 AY956447 AY956448 HQ258213	-101417	+	AK289963 NM_133468 AK096150 BC060868	-854194	+	TSC_hg19_v1_chr7_+_33169175 NM_001033604 NM_001033605 NM_014451 NM_198428 BC003117 AK057660 BX647385 AK314627	-1630255	+	DQ287932 NM_015283	278316	-	CU688238 TSC_hg19_v1_chr7_-_35225788 BC066987 AK304236	426456	-	TSC_hg19_v1_chr7_-_35293701 NM_001077653 NM_001166220 DQ986374	494394	-	AK172847|NPSR1|387129|neuropeptide S receptor 1##AY310326|NPSR1|387129|neuropeptide S receptor 1##AY310327|NPSR1|387129|neuropeptide S receptor 1##AY310328|NPSR1|387129|neuropeptide S receptor 1##AY310329|NPSR1|387129|neuropeptide S receptor 1##AY310330|NPSR1|387129|neuropeptide S receptor 1##AY310331|NPSR1|387129|neuropeptide S receptor 1##AY310332|NPSR1|387129|neuropeptide S receptor 1##NM_207172|NPSR1|387129|neuropeptide S receptor 1##NM_207173|NPSR1|387129|neuropeptide S receptor 1##BC132693|NPSR1|387129|neuropeptide S receptor 1##BC132695|NPSR1|387129|neuropeptide S receptor 1##BC144380|NPSR1|387129|neuropeptide S receptor 1##AY956446|NPSR1|387129|neuropeptide S receptor 1##AY956447|NPSR1|387129|neuropeptide S receptor 1##AY956448|NPSR1|387129|neuropeptide S receptor 1##HQ258213|NPSR1|387129|neuropeptide S receptor 1##AK289963|BMPER|168667|BMP binding endothelial regulator##NM_133468|BMPER|168667|BMP binding endothelial regulator##BC060868|BMPER|168667|BMP binding endothelial regulator##NM_001033604|BBS9|27241|Bardet-Biedl syndrome 9##NM_001033605|BBS9|27241|Bardet-Biedl syndrome 9##NM_014451|BBS9|27241|Bardet-Biedl syndrome 9##NM_198428|BBS9|27241|Bardet-Biedl syndrome 9##AK057660|BBS9|27241|Bardet-Biedl syndrome 9##BX647385|BBS9|27241|Bardet-Biedl syndrome 9##AK314627|BBS9|27241|Bardet-Biedl syndrome 9##DQ287932|DPY19L1|23333|dpy-19-like 1 (C. elegans)##NM_015283|DPY19L1|23333|dpy-19-like 1 (C. elegans)##BC066987|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##AK304236|DPY19L2P1|554236|dpy-19-like 2 pseudogene 1 (C. elegans)##NM_001077653|TBX20|57057|T-box 20##NM_001166220|TBX20|57057|T-box 20##DQ986374|TBX20|57057|T-box 20	0.0	
chr10	100154361	100154464	reg1039106.p1	3.430	+	TSC_hg19_v1_chr10_-_100027952 AK172781 BC013153 BC035470 NM_032211	-126420	-	TSC_hg19_v1_chr10_+_99894427 AF525304 BC047908 BC098175 BC098268 BC098359 BC099848	-259977	+	NM_014472 AK292546 TSC_hg19_v1_chr10_+_99894414	-260015	+	CU675263 DQ893418 DQ896787 AK075265 TSC_hg19_v1_chr10_-_100174919 AK225637 AK074429 BC006131 AK295699 NM_032709	20522	-	BC002514 TSC_hg19_v1_chr10_-_100206650	52234	-	TSC_hg19_v1_chr10_-_100206661 U65676 BC000175 AK295821 U96721	52263	-	AK172781|LOXL4|84171|lysyl oxidase-like 4##BC013153|LOXL4|84171|lysyl oxidase-like 4##BC035470|LOXL4|84171|lysyl oxidase-like 4##NM_032211|LOXL4|84171|lysyl oxidase-like 4##AF525304|C10orf28|27291|chromosome 10 open reading frame 28##BC047908|C10orf28|27291|chromosome 10 open reading frame 28##BC098175|C10orf28|27291|chromosome 10 open reading frame 28##BC098268|C10orf28|27291|chromosome 10 open reading frame 28##BC098359|C10orf28|27291|chromosome 10 open reading frame 28##BC099848|C10orf28|27291|chromosome 10 open reading frame 28##NM_014472|C10orf28|27291|chromosome 10 open reading frame 28##AK292546|C10orf28|27291|chromosome 10 open reading frame 28##DQ893418|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##DQ896787|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK075265|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK225637|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK074429|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##BC006131|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##AK295699|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##NM_032709|PYROXD2|84795|pyridine nucleotide-disulphide oxidoreductase domain 2##BC002514|HPS1|3257|Hermansky-Pudlak syndrome 1##U65676|HPS1|3257|Hermansky-Pudlak syndrome 1##BC000175|HPS1|3257|Hermansky-Pudlak syndrome 1##AK295821|HPS1|3257|Hermansky-Pudlak syndrome 1##U96721|HPS1|3257|Hermansky-Pudlak syndrome 1	0.0	
chr1	205279791	205279871	reg1047131.p1	3.430	+	AY358192 TSC_hg19_v1_chr1_+_205236667	-43197	+	AK293734 NM_001242925	-81773	+	TSC_hg19_v1_chr1_+_205197073 AB007950 NM_014858 AK131419	-82748	+	CU677905 AM392904 AB463145 BC017306 TSC_hg19_v1_chr1_-_205290874 AK074830 AK309520 AL136891 NM_030952 AK303577	11012	-	BC036076 TSC_hg19_v1_chr1_-_205313311	33479	-	AK299227 AK001610 NM_018203 AK096590	46209	-	AY358192|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK293734|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_001242925|TMCC2|9911|transmembrane and coiled-coil domain family 2##AB007950|TMCC2|9911|transmembrane and coiled-coil domain family 2##NM_014858|TMCC2|9911|transmembrane and coiled-coil domain family 2##AK131419|TMCC2|9911|transmembrane and coiled-coil domain family 2##AM392904|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC017306|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK074830|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK309520|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AL136891|NUAK2|81788|NUAK family, SNF1-like kinase, 2##NM_030952|NUAK2|81788|NUAK family, SNF1-like kinase, 2##AK303577|NUAK2|81788|NUAK family, SNF1-like kinase, 2##BC036076|KLHDC8A|55220|kelch domain containing 8A##AK299227|KLHDC8A|55220|kelch domain containing 8A##AK001610|KLHDC8A|55220|kelch domain containing 8A##NM_018203|KLHDC8A|55220|kelch domain containing 8A##AK096590|KLHDC8A|55220|kelch domain containing 8A	0.0	
chr12	776329	776509	reg1022553.p2	3.430	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-3704	-	TSC_hg19_v1_chr12_-_752800 AK298043	-23600	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-24241	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	85737	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	86337	+	BC013629 TSC_hg19_v1_chr12_+_1017145	240663	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr12	92756816	92756899	reg1027425.p1	3.430	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-217214	-	NM_001920	-1180052	-	AL355731 TSC_hg19_v1_chr12_-_91576581	-1180277	-	AJ845165 AJ845166 NM_001025233	60877	+	AJ845168 NM_001025232	65066	-	NM_001037671 NM_001178097	339761	+	BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001920|DCN|1634|decorin##AL355731|DCN|1634|decorin##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74	0.0	
chr14	35834805	35834877	reg1034292.p1	3.430	+	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	-73198	+	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	-73270	+	TSC_hg19_v1_chr14_+_35591757 AK301931 BC050339 BC044580 BC001542 AK304066 BC032221 NM_014672 AB002389 BX161394 BX161487 AK303508	-242989	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	39083	-	AF260323 NM_032594 BC130377 BC130379 TSC_hg19_v1_chr14_+_36003369 AB037912 AK096639	168468	+	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	443306	-	BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK301931|KIAA0391|9692|KIAA0391##BC044580|KIAA0391|9692|KIAA0391##BC001542|KIAA0391|9692|KIAA0391##AK304066|KIAA0391|9692|KIAA0391##BC032221|KIAA0391|9692|KIAA0391##NM_014672|KIAA0391|9692|KIAA0391##AB002389|KIAA0391|9692|KIAA0391##BX161394|KIAA0391|9692|KIAA0391##BX161487|KIAA0391|9692|KIAA0391##AK303508|KIAA0391|9692|KIAA0391##BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AF260323|INSM2|84684|insulinoma-associated 2##NM_032594|INSM2|84684|insulinoma-associated 2##BC130377|INSM2|84684|insulinoma-associated 2##BC130379|INSM2|84684|insulinoma-associated 2##AB037912|INSM2|84684|insulinoma-associated 2##AK096639|INSM2|84684|insulinoma-associated 2##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)	0.0	
chr14	69257637	69257772	reg1033876.p2	3.430	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-971184	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-974405	-	AK315462 NM_152443	-1089102	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	2016	-	NM_001244698 NM_004926	2926	-	NM_001244701 AB528867	5280	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr17	35125624	35125745	reg1039712.p1	3.430	+	AK292307 NM_024864 BC072411	-167633	+	TSC_hg19_v1_chr17_+_34948329 NM_024308 AK315735 AY358712 BC002731	-177396	+	TSC_hg19_v1_chr17_+_34901498 AK290687 AF126964	-224172	+	BC084573 TSC_hg19_v1_chr17_-_35293961	168256	-	BC020470 NM_005568	169087	+	AK057229 NM_012138 TSC_hg19_v1_chr17_+_35306253 AF083208 BC000591 AJ249940 AB385572 CU674286 DQ892097 DQ895290	180615	+	AK292307|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024864|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##BC072411|MRM1|79922|mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)##NM_024308|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK315735|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AY358712|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##BC002731|DHRS11|79154|dehydrogenase/reductase (SDR family) member 11##AK290687|GGNBP2|79893|gametogenetin binding protein 2##AF126964|GGNBP2|79893|gametogenetin binding protein 2##BC020470|LHX1|3975|LIM homeobox 1##NM_005568|LHX1|3975|LIM homeobox 1##AK057229|AATF|26574|apoptosis antagonizing transcription factor##NM_012138|AATF|26574|apoptosis antagonizing transcription factor##AF083208|AATF|26574|apoptosis antagonizing transcription factor##BC000591|AATF|26574|apoptosis antagonizing transcription factor##AJ249940|AATF|26574|apoptosis antagonizing transcription factor##DQ892097|AATF|26574|apoptosis antagonizing transcription factor##DQ895290|AATF|26574|apoptosis antagonizing transcription factor	0.024795	
chr2	155295774	155295918	reg1031423.p1	3.430	+	TSC_hg19_v1_chr2_+_154728434 NM_052917 AK131195	-567402	+	AK311958 BC002908 AK074808 AB043585 NM_019845	-960595	-	BC070140 TSC_hg19_v1_chr2_+_153575135 AF530059	-1720702	+	NM_002239 U50964 AK293824 BC022495 GU068048 GU074515 GU074516 CU692656 DQ892363 DQ895572	259343	+	TSC_hg19_v1_chr2_-_157186683 HQ692824 HQ709176 EU832662 EU832740 AB590645	1890844	-	S77154 FJ643484 TSC_hg19_v1_chr2_-_157189197 X75918 BC066890 BC009288 AK299439 AK291456 AK223625 AK309786 NM_006186	1893317	-	NM_052917|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK131195|GALNT13|114805|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 (GalNAc-T13)##AK311958|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC002908|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AK074808|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##AB043585|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##NM_019845|RPRM|56475|reprimo, TP53 dependent G2 arrest mediator candidate##BC070140|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##AF530059|ARL6IP6|151188|ADP-ribosylation-like factor 6 interacting protein 6##NM_002239|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##U50964|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##AK293824|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##BC022495|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU068048|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##GU074515|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ892363|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##DQ895572|KCNJ3|3760|potassium inwardly-rectifying channel, subfamily J, member 3##HQ692824|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##HQ709176|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832662|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##EU832740|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##S77154|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##FJ643484|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##X75918|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC066890|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##BC009288|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK299439|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK291456|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK223625|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##AK309786|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2##NM_006186|NR4A2|4929|nuclear receptor subfamily 4, group A, member 2	0.582126	CTCF.p2:13:0.582
chr3	170028316	170028440	reg1000591.p2	3.430	+	TSC_hg19_v1_chr3_+_169940250 L33881 AK315342 AB590674 AB451443	-88013	+	TSC_hg19_v1_chr3_+_169940223 BC022016	-88149	+	TSC_hg19_v1_chr3_+_169940214 NM_002740 L18964	-88161	+	TSC_hg19_v1_chr3_+_170075455 NM_001145098 NM_005414	47091	+	TSC_hg19_v1_chr3_+_170075508 BC059386	47128	+	AK300053 TSC_hg19_v1_chr3_+_170075522 BC053554	47178	+	L33881|PRKCI|5584|protein kinase C, iota##AK315342|PRKCI|5584|protein kinase C, iota##AB451443|PRKCI|5584|protein kinase C, iota##BC022016|PRKCI|5584|protein kinase C, iota##NM_002740|PRKCI|5584|protein kinase C, iota##L18964|PRKCI|5584|protein kinase C, iota##NM_001145098|SKIL|6498|SKI-like oncogene##NM_005414|SKIL|6498|SKI-like oncogene##BC059386|SKIL|6498|SKI-like oncogene##AK300053|SKIL|6498|SKI-like oncogene	0.0	
chr4	185457982	185458055	reg1006411.p1	3.430	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	-62337	-	BC035035 AY358676 AK057370 NM_153343	-318953	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-630107	+	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	112583	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	112815	+	TSC_hg19_v1_chr4_+_185570923 BC064600 AK307317	112911	+	X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111##BC064600|CCDC111|201973|coiled-coil domain containing 111##AK307317|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr5	172221269	172221371	reg1032366.p2	3.430	+	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	-23109	-	AF275799 TSC_hg19_v1_chr5_-_172083715	-137677	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-153067	+	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	39998	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	165128	+	NM_003945 TSC_hg19_v1_chr5_+_172410801 BC119715 BC119714 AK312068 Y15286	189462	+	X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1##NM_003945|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119715|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119714|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##AK312068|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##Y15286|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1	0.0	
chr7	148892217	148892382	reg1019658.p1	3.430	+	TSC_hg19_v1_chr7_+_148844772 AY049744 AB527270 CU692152	-47540	+	TSC_hg19_v1_chr7_+_148844532 AK026380 NM_170686 BC043295 AK290499	-47770	+	TSC_hg19_v1_chr7_+_148823499 AY049743 NM_020781	-68797	+	D30612 TSC_hg19_v1_chr7_+_148892683 NM_003575 AK299280 BC073805 AK316282 AB587508 BC055287 BC041704	390	+	TSC_hg19_v1_chr7_+_148936741 AK074821 NM_012256 BC022785 EU446738 CU692712	44495	+	TSC_hg19_v1_chr7_+_148959286 AK131504 NM_001195220 BC131569 AB528912	67021	+	AY049744|ZNF398|57541|zinc finger protein 398##AK026380|ZNF398|57541|zinc finger protein 398##NM_170686|ZNF398|57541|zinc finger protein 398##BC043295|ZNF398|57541|zinc finger protein 398##AK290499|ZNF398|57541|zinc finger protein 398##AY049743|ZNF398|57541|zinc finger protein 398##NM_020781|ZNF398|57541|zinc finger protein 398##D30612|ZNF282|8427|zinc finger protein 282##NM_003575|ZNF282|8427|zinc finger protein 282##AK299280|ZNF282|8427|zinc finger protein 282##BC073805|ZNF282|8427|zinc finger protein 282##AK316282|ZNF282|8427|zinc finger protein 282##BC055287|ZNF282|8427|zinc finger protein 282##BC041704|ZNF282|8427|zinc finger protein 282##AK074821|ZNF212|7988|zinc finger protein 212##NM_012256|ZNF212|7988|zinc finger protein 212##BC022785|ZNF212|7988|zinc finger protein 212##EU446738|ZNF212|7988|zinc finger protein 212##NM_001195220|ZNF783|100289678|zinc finger family member 783	0.0	
chr8	137219120	137219220	reg1040507.p1	3.430	+	AB463818 DQ890886 DQ894041 AF051322 TSC_hg19_v1_chr8_+_136470277	-748969	+	TSC_hg19_v1_chr8_+_136469698 BC068536 BC032606 AF051321 NM_006558 AF069681	-749512	+	BC101766 BC101768 BC143519 TSC_hg19_v1_chr8_-_135725284 AK300471 AK094089 AB167738 AB167739 AL832066 NM_001174157 NM_020863	-1493896	-	AB196635 AK091433 AX746980 NM_015912 TSC_hg19_v1_chr8_-_139509141	2289936	-	AF406780 NM_152888 TSC_hg19_v1_chr8_-_139926253	2707074	-	AF212829 AF279809 AY190605 AF257080 BC075079 BC075080 BC112063 BC112065 AF248241 NM_016601 TSC_hg19_v1_chr8_-_140715330	3496112	-	DQ890886|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##DQ894041|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051322|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC068536|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC032606|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF051321|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##NM_006558|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##AF069681|KHDRBS3|10656|KH domain containing, RNA binding, signal transduction associated 3##BC101766|ZFAT|57623|zinc finger and AT hook domain containing##BC101768|ZFAT|57623|zinc finger and AT hook domain containing##BC143519|ZFAT|57623|zinc finger and AT hook domain containing##AK300471|ZFAT|57623|zinc finger and AT hook domain containing##AK094089|ZFAT|57623|zinc finger and AT hook domain containing##AB167738|ZFAT|57623|zinc finger and AT hook domain containing##AB167739|ZFAT|57623|zinc finger and AT hook domain containing##AL832066|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174157|ZFAT|57623|zinc finger and AT hook domain containing##NM_020863|ZFAT|57623|zinc finger and AT hook domain containing##AB196635|FAM135B|51059|family with sequence similarity 135, member B##AK091433|FAM135B|51059|family with sequence similarity 135, member B##NM_015912|FAM135B|51059|family with sequence similarity 135, member B##AF406780|COL22A1|169044|collagen, type XXII, alpha 1##NM_152888|COL22A1|169044|collagen, type XXII, alpha 1##AF212829|KCNK9|51305|potassium channel, subfamily K, member 9##AF279809|KCNK9|51305|potassium channel, subfamily K, member 9##AY190605|KCNK9|51305|potassium channel, subfamily K, member 9##AF257080|KCNK9|51305|potassium channel, subfamily K, member 9##BC075079|KCNK9|51305|potassium channel, subfamily K, member 9##BC075080|KCNK9|51305|potassium channel, subfamily K, member 9##BC112063|KCNK9|51305|potassium channel, subfamily K, member 9##BC112065|KCNK9|51305|potassium channel, subfamily K, member 9##AF248241|KCNK9|51305|potassium channel, subfamily K, member 9##NM_016601|KCNK9|51305|potassium channel, subfamily K, member 9	0.0	
chr9	127048575	127048683	reg1022352.p2	3.430	+	TSC_hg19_v1_chr9_+_127020588 AL832574	-28039	+	TSC_hg19_v1_chr9_+_127020519 NM_001166168 AK313071	-28106	+	TSC_hg19_v1_chr9_+_127020255 AB026289	-28365	+	TSC_hg19_v1_chr9_+_127054267 NM_001166170 NM_001166171	5630	+	TSC_hg19_v1_chr9_+_127054570 AK294614 NM_001166169	6003	+	TSC_hg19_v1_chr9_+_127119114 BC042968	70540	+	NM_001166168|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AK313071|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166170|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166171|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AK294614|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001166169|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.0	
chr9	33935745	33935878	reg1035071.p2	3.430	+	TSC_hg19_v1_chr9_+_33817704 AJ240087 CR457233	-118139	+	TSC_hg19_v1_chr9_+_33817325 BC047584 AK000426 BC004862 AK225880	-118417	+	TSC_hg19_v1_chr9_+_33817170 NM_017811	-118627	+	AB209911 TSC_hg19_v1_chr9_-_34048886 AK302754 AK294952 AK299183 AK303493 CR933678	113066	-	TSC_hg19_v1_chr9_-_34048895 BC111409 AK302335 NM_018449	113105	-	AK000354 AK292935 TSC_hg19_v1_chr9_-_34126623	190775	-	AJ240087|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##CR457233|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC047584|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK000426|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC004862|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK225880|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AB209911|UBAP2|55833|ubiquitin associated protein 2##AK302754|UBAP2|55833|ubiquitin associated protein 2##AK294952|UBAP2|55833|ubiquitin associated protein 2##AK299183|UBAP2|55833|ubiquitin associated protein 2##AK303493|UBAP2|55833|ubiquitin associated protein 2##CR933678|UBAP2|55833|ubiquitin associated protein 2##BC111409|UBAP2|55833|ubiquitin associated protein 2##AK302335|UBAP2|55833|ubiquitin associated protein 2##NM_018449|UBAP2|55833|ubiquitin associated protein 2##AK000354|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK292935|DCAF12|25853|DDB1 and CUL4 associated factor 12	0.0	
chr10	111975603	111975766	reg1040626.p2	3.429	+	BC012907 NM_001008541	-5696	+	TSC_hg19_v1_chr10_+_111967381 BC035128 NM_130439	-8325	+	AK291488 TSC_hg19_v1_chr10_+_111767988 U37122 BC043143	-207717	+	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	10137	+	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	88909	-	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	89016	-	BC012907|MXI1|4601|MAX interactor 1##NM_001008541|MXI1|4601|MAX interactor 1##BC035128|MXI1|4601|MAX interactor 1##NM_130439|MXI1|4601|MAX interactor 1##AK291488|ADD3|120|adducin 3 (gamma)##U37122|ADD3|120|adducin 3 (gamma)##BC043143|ADD3|120|adducin 3 (gamma)##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1	0.0	
chr10	11289007	11289186	reg1034167.p1	3.429	+	TSC_hg19_v1_chr10_+_11207490 AK295511	-81604	+	TSC_hg19_v1_chr10_+_11207446 AK302681 AK310038	-81650	+	TSC_hg19_v1_chr10_+_11207418 AK304216	-81671	+	NM_001080491	285177	-	TSC_hg19_v1_chr10_-_11653590 AK292944 AK311453 BC042943 D13644 BC010351 NM_014688	364540	-	NM_024693 AF275677 TSC_hg19_v1_chr10_+_11784436 AF289604 AK222511 AK290902 BC009617 AK024562	495302	+	AK295511|CELF2|10659|CUGBP, Elav-like family member 2##AK302681|CELF2|10659|CUGBP, Elav-like family member 2##AK310038|CELF2|10659|CUGBP, Elav-like family member 2##AK304216|CELF2|10659|CUGBP, Elav-like family member 2##NM_001080491|USP6NL|9712|USP6 N-terminal like##AK292944|USP6NL|9712|USP6 N-terminal like##BC042943|USP6NL|9712|USP6 N-terminal like##D13644|USP6NL|9712|USP6 N-terminal like##BC010351|USP6NL|9712|USP6 N-terminal like##NM_014688|USP6NL|9712|USP6 N-terminal like##NM_024693|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF275677|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AF289604|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK222511|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK290902|ECHDC3|79746|enoyl CoA hydratase domain containing 3##BC009617|ECHDC3|79746|enoyl CoA hydratase domain containing 3##AK024562|ECHDC3|79746|enoyl CoA hydratase domain containing 3	0.0	
chr11	133701328	133701414	reg1039343.p2	3.429	+	AK315859 AK315859 TSC_hg19_v1_chr11_-_133402298 BX537377 NM_001012393	-299057	-	AK314077 EU562295 EU562297 AK316491 TSC_hg19_v1_chr11_-_132813671	-887766	-	EU562299 BC117254 BC126251 BC143945 BC143946 BC074742 BC074773 L34774 NM_002545 AK289695	-888357	-	AF521713 AK098717 NM_174927 BC058039	14010	-	NM_014987 TSC_hg19_v1_chr11_-_133826886	125511	-	AJ416101 NM_001205329 NM_032801 AY358335 TSC_hg19_v1_chr11_+_133938938 AK074769 AF448478	237510	+	AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK315859|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BX537377|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_001012393|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK314077|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562295|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562297|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK316491|OPCML|4978|opioid binding protein/cell adhesion molecule-like##EU562299|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC117254|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC126251|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143945|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC143946|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074742|OPCML|4978|opioid binding protein/cell adhesion molecule-like##BC074773|OPCML|4978|opioid binding protein/cell adhesion molecule-like##L34774|OPCML|4978|opioid binding protein/cell adhesion molecule-like##NM_002545|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AK289695|OPCML|4978|opioid binding protein/cell adhesion molecule-like##AF521713|SPATA19|219938|spermatogenesis associated 19##AK098717|SPATA19|219938|spermatogenesis associated 19##NM_174927|SPATA19|219938|spermatogenesis associated 19##BC058039|SPATA19|219938|spermatogenesis associated 19##NM_014987|IGSF9B|22997|immunoglobulin superfamily, member 9B##AJ416101|JAM3|83700|junctional adhesion molecule 3##NM_001205329|JAM3|83700|junctional adhesion molecule 3##NM_032801|JAM3|83700|junctional adhesion molecule 3##AY358335|JAM3|83700|junctional adhesion molecule 3##AK074769|JAM3|83700|junctional adhesion molecule 3##AF448478|JAM3|83700|junctional adhesion molecule 3	0.581202	CTCF.p2:14:0.558
chr1	234746129	234746304	reg1031958.p1	3.429	+	TSC_hg19_v1_chr1_-_234745245 BC065759 AY278023 AY278024 NM_001077397 NM_182972	-970	-	TSC_hg19_v1_chr1_-_234743861 AK309579	-2358	-	TSC_hg19_v1_chr1_-_234743841 AK299768	-2385	-	TSC_hg19_v1_chr1_-_234895746 AF193050	149558	-	CR456718 DQ891102 EU176557 TSC_hg19_v1_chr1_-_235292147 BC071994 D13641 BC107851 BC100286 BC066335 BC000882	545873	-	TSC_hg19_v1_chr1_-_235292229 AK289810 NM_014765	546015	-	BC065759|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278023|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AY278024|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_001077397|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##NM_182972|IRF2BP2|359948|interferon regulatory factor 2 binding protein 2##AF193050|PP2672|100130249|uncharacterized LOC100130249##CR456718|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##DQ891102|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##EU176557|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC071994|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##D13641|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC107851|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC100286|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC066335|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##BC000882|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##AK289810|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)##NM_014765|TOMM20|9804|translocase of outer mitochondrial membrane 20 homolog (yeast)	0.0	
chr17	26877125	26877201	reg1039908.p2	3.429	+	NM_003593 Y11739	-26205	+	TSC_hg19_v1_chr17_+_26800661 AK314684 NM_001145975 NM_001145976 NM_003984 U26209 BC096276 BC096277 BC096278 BC096279 AK091926 AK298388 AK303909 AK303936	-76457	+	CU678258 TSC_hg19_v1_chr17_+_26794963	-82260	+	AF028788 AF028789 TSC_hg19_v1_chr17_-_26879616 AK292329 BC027176 U40998	2447	-	NM_005148 NM_054035 TSC_hg19_v1_chr17_-_26879647 AB593014	2489	-	AY359112 AB057723 AB527641 CU686718 TSC_hg19_v1_chr17_-_26898525 AK055512 BC069228 AK075428 AK297046 AK314583	21366	-	NM_003593|FOXN1|8456|forkhead box N1##Y11739|FOXN1|8456|forkhead box N1##AK314684|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145975|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145976|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_003984|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##U26209|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096276|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096277|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096278|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096279|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK091926|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK298388|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303909|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303936|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AF028788|UNC119|9094|unc-119 homolog (C. elegans)##AF028789|UNC119|9094|unc-119 homolog (C. elegans)##AK292329|UNC119|9094|unc-119 homolog (C. elegans)##BC027176|UNC119|9094|unc-119 homolog (C. elegans)##U40998|UNC119|9094|unc-119 homolog (C. elegans)##NM_005148|UNC119|9094|unc-119 homolog (C. elegans)##NM_054035|UNC119|9094|unc-119 homolog (C. elegans)##AB593014|UNC119|9094|unc-119 homolog (C. elegans)##AY359112|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AB057723|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK055512|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##BC069228|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK075428|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK297046|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK314583|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S	0.0	
chr17_ctg5_hap1	74	148	reg1034797.p1	3.429	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr19	46146344	46146456	reg1005154.p3	3.429	+	NM_001242348 BC007358	-1474	+	TSC_hg19_v1_chr19_-_46142667 AF103939 NM_012155	-3726	-	AL096717 TSC_hg19_v1_chr19_-_46142656 BC032630 AK026616 AK308403 AK304299 AK225043	-3749	-	AK295905 NM_001193269	584	-	AK308580 AK296258 AK294668 NM_001193268 BC029304	2323	-	NM_000164 U39231 BC093723 BC101673 BC143300 BC143302 S79852	25107	+	NM_001242348|LOC100287177|100287177|uncharacterized LOC100287177##BC007358|LOC100287177|100287177|uncharacterized LOC100287177##AF103939|EML2|24139|echinoderm microtubule associated protein like 2##NM_012155|EML2|24139|echinoderm microtubule associated protein like 2##AL096717|EML2|24139|echinoderm microtubule associated protein like 2##BC032630|EML2|24139|echinoderm microtubule associated protein like 2##AK026616|EML2|24139|echinoderm microtubule associated protein like 2##AK308403|EML2|24139|echinoderm microtubule associated protein like 2##AK304299|EML2|24139|echinoderm microtubule associated protein like 2##AK225043|EML2|24139|echinoderm microtubule associated protein like 2##AK295905|EML2|24139|echinoderm microtubule associated protein like 2##NM_001193269|EML2|24139|echinoderm microtubule associated protein like 2##AK296258|EML2|24139|echinoderm microtubule associated protein like 2##AK294668|EML2|24139|echinoderm microtubule associated protein like 2##NM_001193268|EML2|24139|echinoderm microtubule associated protein like 2##BC029304|EML2|24139|echinoderm microtubule associated protein like 2##NM_000164|GIPR|2696|gastric inhibitory polypeptide receptor##U39231|GIPR|2696|gastric inhibitory polypeptide receptor##BC093723|GIPR|2696|gastric inhibitory polypeptide receptor##BC101673|GIPR|2696|gastric inhibitory polypeptide receptor##BC143300|GIPR|2696|gastric inhibitory polypeptide receptor##BC143302|GIPR|2696|gastric inhibitory polypeptide receptor##S79852|GIPR|2696|gastric inhibitory polypeptide receptor	0.0	
chr19	58071123	58071271	reg1038938.p1	3.429	+	AB590451 EU831944 EU832039 TSC_hg19_v1_chr19_-_58071232 BC053858 BC034810 BX538032 AK312802 AK122867	-54	-	CU691042 EU446587 NM_001039654	-3473	-	TSC_hg19_v1_chr19_+_58038926 AB587450 EU446595 EU831960 EU832053 CU687482	-32264	+	CU674052 EU446818 TSC_hg19_v1_chr19_-_58090246 BC000130 NM_017879	18961	-	TSC_hg19_v1_chr19_-_58090280 AK000564	19084	-	AK128340 TSC_hg19_v1_chr19_+_58095512 AK092538 AX747588 BC103957 BC103958 BC103959 NM_001010879	24370	+	EU831944|ZNF550|162972|zinc finger protein 550##EU832039|ZNF550|162972|zinc finger protein 550##BC053858|ZNF550|162972|zinc finger protein 550##BC034810|ZNF550|162972|zinc finger protein 550##BX538032|ZNF550|162972|zinc finger protein 550##AK312802|ZNF550|162972|zinc finger protein 550##AK122867|ZNF550|162972|zinc finger protein 550##EU446587|ZNF550|162972|zinc finger protein 550##NM_001039654|ZNF550|162972|zinc finger protein 550##EU446595|ZNF549|256051|zinc finger protein 549##EU831960|ZNF549|256051|zinc finger protein 549##EU832053|ZNF549|256051|zinc finger protein 549##EU446818|ZNF416|55659|zinc finger protein 416##BC000130|ZNF416|55659|zinc finger protein 416##NM_017879|ZNF416|55659|zinc finger protein 416##AK000564|ZNF416|55659|zinc finger protein 416##AK128340|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##AK092538|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##BC103957|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##BC103958|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##BC103959|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)##NM_001010879|ZIK1|284307|zinc finger protein interacting with K protein 1 homolog (mouse)	0.0	
chr19	6577449	6577628	reg1038660.p1	3.429	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	-46512	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-75221	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-95755	-	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	13494	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	13568	-	TSC_hg19_v1_chr19_-_6591162 S69339 L08096 NM_001252	13620	-	NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule##S69339|CD70|970|CD70 molecule##L08096|CD70|970|CD70 molecule##NM_001252|CD70|970|CD70 molecule	0.0	
chr2	10444244	10444390	reg1038760.p2	3.429	+	AK000596 NM_134421	-492	+	TSC_hg19_v1_chr2_+_10443043 BC017482 NM_002149 BC009846 BC017028	-1268	+	BC093999 BC094001 NM_182626	-162338	+	D28365 BC014562 BC025296 X55362 TSC_hg19_v1_chr2_-_10588440	144043	-	TSC_hg19_v1_chr2_-_10588453 AK301956 NM_002539	144135	-	CU675005 TSC_hg19_v1_chr2_-_10830078 AK290680 AK024000 BC005125 AK024137 AK297169 AK299617	385727	-	AK000596|HPCAL1|3241|hippocalcin-like 1##NM_134421|HPCAL1|3241|hippocalcin-like 1##BC017482|HPCAL1|3241|hippocalcin-like 1##NM_002149|HPCAL1|3241|hippocalcin-like 1##BC009846|HPCAL1|3241|hippocalcin-like 1##BC017028|HPCAL1|3241|hippocalcin-like 1##BC093999|C2orf48|348738|chromosome 2 open reading frame 48##BC094001|C2orf48|348738|chromosome 2 open reading frame 48##NM_182626|C2orf48|348738|chromosome 2 open reading frame 48##D28365|ODC1|4953|ornithine decarboxylase 1##BC014562|ODC1|4953|ornithine decarboxylase 1##BC025296|ODC1|4953|ornithine decarboxylase 1##X55362|ODC1|4953|ornithine decarboxylase 1##AK301956|ODC1|4953|ornithine decarboxylase 1##NM_002539|ODC1|4953|ornithine decarboxylase 1##AK290680|NOL10|79954|nucleolar protein 10##AK024000|NOL10|79954|nucleolar protein 10##BC005125|NOL10|79954|nucleolar protein 10##AK024137|NOL10|79954|nucleolar protein 10##AK297169|NOL10|79954|nucleolar protein 10##AK299617|NOL10|79954|nucleolar protein 10	0.044887	
chr21	43284517	43284584	reg1040009.p1	3.429	+	AK027424 TSC_hg19_v1_chr21_-_43187270	-97283	-	TSC_hg19_v1_chr21_-_43187213 EU832165 EU832259 BC035755 BC110617 BC110618 AB047783 AJ278016 NM_020639	-97328	-	TSC_hg19_v1_chr21_-_42880086 BC015819 NM_005656	-404467	-	TSC_hg19_v1_chr21_-_43299444 BC032305 AB051812 AB051813 AB051814 AB051815 NM_001040424 AF276513 AY078498 NM_022115	14948	-	BC062323 AL833323 NM_199050	62239	-	TSC_hg19_v1_chr21_-_43374095 AB047784 AB047785 NM_015500	89533	-	AK027424|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832165|RIPK4|54101|receptor-interacting serine-threonine kinase 4##EU832259|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC035755|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110617|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC110618|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AB047783|RIPK4|54101|receptor-interacting serine-threonine kinase 4##AJ278016|RIPK4|54101|receptor-interacting serine-threonine kinase 4##NM_020639|RIPK4|54101|receptor-interacting serine-threonine kinase 4##BC015819|TMPRSS2|7113|transmembrane protease, serine 2##NM_005656|TMPRSS2|7113|transmembrane protease, serine 2##AB051812|PRDM15|63977|PR domain containing 15##AB051813|PRDM15|63977|PR domain containing 15##AB051814|PRDM15|63977|PR domain containing 15##AB051815|PRDM15|63977|PR domain containing 15##NM_001040424|PRDM15|63977|PR domain containing 15##AF276513|PRDM15|63977|PR domain containing 15##AY078498|PRDM15|63977|PR domain containing 15##NM_022115|PRDM15|63977|PR domain containing 15##BC062323|C2CD2|25966|C2 calcium-dependent domain containing 2##AL833323|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_199050|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047784|C2CD2|25966|C2 calcium-dependent domain containing 2##AB047785|C2CD2|25966|C2 calcium-dependent domain containing 2##NM_015500|C2CD2|25966|C2 calcium-dependent domain containing 2	0.0	
chr4	113067442	113067555	reg1039356.p2	3.429	+	BC022534 NM_152400 TSC_hg19_v1_chr4_+_113066573 AK096689	-884	+	NM_001204397 NM_001204398 NM_001204399 NM_153426 NM_153427	-1504220	-	BC106010 TSC_hg19_v1_chr4_-_111558185 AK291591 AF048720 AF048721	-1509329	-	TSC_hg19_v1_chr4_+_113152928 NM_001128426 NM_018569 AK310787 BX647702 AL136628 BC009485 AK315299 AB463522 AM392774 AM393046 AM393154 AM393604 AM393708 EU831660 EU831743	85586	+	TSC_hg19_v1_chr4_-_113207032 BC014259 BC008294 AK292900 AB097011 AB097038 NM_052864	139503	-	NM_001102406 NM_025144 TSC_hg19_v1_chr4_+_113218524 AK026323 AK304708 AK097246 BC028117 AK303489 BX648798 BC060780	151029	+	BC022534|C4orf32|132720|chromosome 4 open reading frame 32##NM_152400|C4orf32|132720|chromosome 4 open reading frame 32##AK096689|C4orf32|132720|chromosome 4 open reading frame 32##NM_001204397|PITX2|5308|paired-like homeodomain 2##NM_001204398|PITX2|5308|paired-like homeodomain 2##NM_001204399|PITX2|5308|paired-like homeodomain 2##NM_153426|PITX2|5308|paired-like homeodomain 2##NM_153427|PITX2|5308|paired-like homeodomain 2##BC106010|PITX2|5308|paired-like homeodomain 2##AK291591|PITX2|5308|paired-like homeodomain 2##AF048720|PITX2|5308|paired-like homeodomain 2##AF048721|PITX2|5308|paired-like homeodomain 2##NM_001128426|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##NM_018569|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK310787|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BX647702|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AL136628|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC009485|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AK315299|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM392774|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393046|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393154|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393604|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##AM393708|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831660|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##EU831743|AP1AR|55435|adaptor-related protein complex 1 associated regulatory protein##BC014259|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##BC008294|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AK292900|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097011|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##AB097038|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_052864|TIFA|92610|TRAF-interacting protein with forkhead-associated domain##NM_001102406|ALPK1|80216|alpha-kinase 1##NM_025144|ALPK1|80216|alpha-kinase 1##AK026323|ALPK1|80216|alpha-kinase 1##AK304708|ALPK1|80216|alpha-kinase 1##AK097246|ALPK1|80216|alpha-kinase 1##BC028117|ALPK1|80216|alpha-kinase 1##AK303489|ALPK1|80216|alpha-kinase 1##BX648798|ALPK1|80216|alpha-kinase 1##BC060780|ALPK1|80216|alpha-kinase 1	0.0	
chr4	38325132	38325209	reg1037002.p2	3.429	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-346153	+	AF095288 BC069114 BC069400 NM_006607	-363115	+	TSC_hg19_v1_chr4_+_37892713 BC050321 BC028196 NM_015173 BC029950 AK295746	-432381	+	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	340656	+	AF289565 TSC_hg19_v1_chr4_-_38666549	341319	-	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	459429	-	AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AF095288|PTTG2|10744|pituitary tumor-transforming 2##BC069114|PTTG2|10744|pituitary tumor-transforming 2##BC069400|PTTG2|10744|pituitary tumor-transforming 2##NM_006607|PTTG2|10744|pituitary tumor-transforming 2##BC050321|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC028196|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_015173|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##BC029950|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AK295746|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AF289565|FLJ13197|79667|uncharacterized FLJ13197##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10	0.0	
chr4	76394133	76394214	reg1025268.p2	3.429	+	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	-535801	+	BC011618 S55606 AB109441 NM_001729	-674390	-	BC009799 M30704 NM_001657	-913545	+	TSC_hg19_v1_chr4_-_76439504 AK309555 AK308754 AB528599 AF247041 CU689096 CU690404 GQ129342 GQ129343 GQ250944 GQ250945 GQ250946 JF691538 JF691539 AB209072 AF255666 AY888047 GU937000 AF305424	45343	-	TSC_hg19_v1_chr4_-_76439614 AK091501 AX747022 BC031057 BC047393 NM_001008925 NM_001009922 NM_015436	45441	-	NM_144721 TSC_hg19_v1_chr4_+_76439670 AK310575 AK056959 AK303658 AK308914 AK309187 AL833350 BX647579 AK313765	45518	+	NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##AK309555|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK308754|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF247041|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129342|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129343|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250944|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250945|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250946|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AB209072|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF255666|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AY888047|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GU937000|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF305424|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK091501|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC031057|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC047393|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001008925|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001009922|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_015436|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_144721|THAP6|152815|THAP domain containing 6##AK310575|THAP6|152815|THAP domain containing 6##AK056959|THAP6|152815|THAP domain containing 6##AK303658|THAP6|152815|THAP domain containing 6##AK308914|THAP6|152815|THAP domain containing 6##AK309187|THAP6|152815|THAP domain containing 6##AL833350|THAP6|152815|THAP domain containing 6##BX647579|THAP6|152815|THAP domain containing 6##AK313765|THAP6|152815|THAP domain containing 6	0.940671	CTCF.p2:13:0.941
chr5	81775475	81775550	reg1038009.p1	3.429	+	BC093982 BC112191 NM_001017971	-174347	+	TSC_hg19_v1_chr5_-_81574219 NM_001025	-201293	-	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	-201341	-	BC026285 TSC_hg19_v1_chr5_-_82373172 BX647979 BC107575 BC070122 BC028585	597685	-	TSC_hg19_v1_chr5_-_82373255 NM_174909	597750	-	NM_003401 NM_022406 NM_022550 TSC_hg19_v1_chr5_+_82373411 BC005259 AK290739 BC016314 U40622 AB017445	597871	+	BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001025|RPS23|6228|ribosomal protein S23##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##BC026285|TMEM167A|153339|transmembrane protein 167A##BX647979|TMEM167A|153339|transmembrane protein 167A##BC107575|TMEM167A|153339|transmembrane protein 167A##BC070122|TMEM167A|153339|transmembrane protein 167A##BC028585|TMEM167A|153339|transmembrane protein 167A##NM_174909|TMEM167A|153339|transmembrane protein 167A##NM_003401|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022406|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##NM_022550|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC005259|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AK290739|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##BC016314|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##U40622|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4##AB017445|XRCC4|7518|X-ray repair complementing defective repair in Chinese hamster cells 4	0.0	
chr6	3851311	3851380	reg1037505.p1	3.429	+	BC001261 NM_012135 Y18503	-1719	+	NM_183373 TSC_hg19_v1_chr6_-_3752248	-99099	-	TSC_hg19_v1_chr6_-_3720312 BC031944	-131035	-	TSC_hg19_v1_chr6_+_4021647 BC034969 NM_003913 AK291244 AB011108 AF283465 AB385345 AY029347	170244	+	BC039349 NM_173563	228078	-	NM_001085401 BC047663 BC066986	228099	+	BC001261|FAM50B|26240|family with sequence similarity 50, member B##NM_012135|FAM50B|26240|family with sequence similarity 50, member B##Y18503|FAM50B|26240|family with sequence similarity 50, member B##NM_183373|PXDC1|221749|PX domain containing 1##BC034969|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##NM_003913|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AK291244|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AB011108|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AF283465|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##AY029347|PRPF4B|8899|PRP4 pre-mRNA processing factor 4 homolog B (yeast)##BC039349|C6orf146|222826|chromosome 6 open reading frame 146##NM_173563|C6orf146|222826|chromosome 6 open reading frame 146##NM_001085401|C6orf201|404220|chromosome 6 open reading frame 201##BC047663|C6orf201|404220|chromosome 6 open reading frame 201##BC066986|C6orf201|404220|chromosome 6 open reading frame 201	0.0	
chr8	125619673	125619802	reg1037541.p1	3.429	+	AF116674 TSC_hg19_v1_chr8_-_125580771	-38976	-	TSC_hg19_v1_chr8_-_125579395 AK126989	-40331	-	NM_005005 AF261090 TSC_hg19_v1_chr8_+_125551363 AF044956 AF067168 AK026538 AL136714 BC007672 AK302286 AK313432 AB463917	-68353	+	TSC_hg19_v1_chr8_-_125716430 U50573	96695	-	EF560715 TSC_hg19_v1_chr8_-_125740463 AK027015	120708	-	TSC_hg19_v1_chr8_-_125740689 AF086645 NM_014751	120986	-	AF116674|MTSS1|9788|metastasis suppressor 1##AK126989|MTSS1|9788|metastasis suppressor 1##NM_005005|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF261090|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF044956|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AF067168|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AK026538|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AL136714|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##BC007672|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##AK313432|NDUFB9|4715|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9, 22kDa##U50573|MTSS1|9788|metastasis suppressor 1##EF560715|MTSS1|9788|metastasis suppressor 1##AK027015|MTSS1|9788|metastasis suppressor 1##AF086645|MTSS1|9788|metastasis suppressor 1##NM_014751|MTSS1|9788|metastasis suppressor 1	0.0	
chr8	54812242	54812423	reg1030862.p1	3.429	+	TSC_hg19_v1_chr8_+_54793579 AF060877 HQ257937 BC015614	-18770	+	TSC_hg19_v1_chr8_+_54793431 AK094503 BC063490 NM_003702 BC054867 BC018618 BC031328	-18880	+	AY046538 NM_170587 AF366054 AF366055 AF366056	-47919	+	BT019995 CR542221 AB464783 AK290454 TSC_hg19_v1_chr8_-_54934848 X62585 BC072460 X57198 AK026617 AK297957 BX538034 AK297729	122435	-	TSC_hg19_v1_chr8_-_54934851 M81601	122522	-	TSC_hg19_v1_chr8_-_54934990 NM_006756 NM_201437	122687	-	AF060877|RGS20|8601|regulator of G-protein signaling 20##HQ257937|RGS20|8601|regulator of G-protein signaling 20##BC015614|RGS20|8601|regulator of G-protein signaling 20##AK094503|RGS20|8601|regulator of G-protein signaling 20##BC063490|RGS20|8601|regulator of G-protein signaling 20##NM_003702|RGS20|8601|regulator of G-protein signaling 20##BC018618|RGS20|8601|regulator of G-protein signaling 20##BC031328|RGS20|8601|regulator of G-protein signaling 20##AY046538|RGS20|8601|regulator of G-protein signaling 20##NM_170587|RGS20|8601|regulator of G-protein signaling 20##AF366054|RGS20|8601|regulator of G-protein signaling 20##AF366055|RGS20|8601|regulator of G-protein signaling 20##AF366056|RGS20|8601|regulator of G-protein signaling 20##BT019995|TCEA1|6917|transcription elongation factor A (SII), 1##CR542221|TCEA1|6917|transcription elongation factor A (SII), 1##AK290454|TCEA1|6917|transcription elongation factor A (SII), 1##X62585|TCEA1|6917|transcription elongation factor A (SII), 1##BC072460|TCEA1|6917|transcription elongation factor A (SII), 1##X57198|TCEA1|6917|transcription elongation factor A (SII), 1##AK026617|TCEA1|6917|transcription elongation factor A (SII), 1##AK297957|TCEA1|6917|transcription elongation factor A (SII), 1##BX538034|TCEA1|6917|transcription elongation factor A (SII), 1##AK297729|TCEA1|6917|transcription elongation factor A (SII), 1##M81601|TCEA1|6917|transcription elongation factor A (SII), 1##NM_006756|TCEA1|6917|transcription elongation factor A (SII), 1##NM_201437|TCEA1|6917|transcription elongation factor A (SII), 1	0.0	
chr8	83470047	83470133	reg1035542.p2	3.429	+	AL833763 BC033630 AK290903 NM_022133 NM_152836 NM_152837	-715617	-	TSC_hg19_v1_chr8_+_82644710 BC014321 NM_152284 AK314873 AK000049 AY329086 AB120734	-825331	+	TSC_hg19_v1_chr8_-_82633531 CR457323 BC051857 AK304111 BC056877 BC022251 AK024069 AK225195 NM_001170796 NM_001170797 NM_024699	-836564	-	NM_001100392 NM_001100393 TSC_hg19_v1_chr8_+_85095454	1625369	+	AK095560 TSC_hg19_v1_chr8_+_85095510 AK094543 AF495529 AF495530 NM_173848	1625453	+	TSC_hg19_v1_chr8_+_85095702 AK095026	1625645	+	AL833763|SNX16|64089|sorting nexin 16##BC033630|SNX16|64089|sorting nexin 16##AK290903|SNX16|64089|sorting nexin 16##NM_022133|SNX16|64089|sorting nexin 16##NM_152836|SNX16|64089|sorting nexin 16##NM_152837|SNX16|64089|sorting nexin 16##BC014321|CHMP4C|92421|charged multivesicular body protein 4C##NM_152284|CHMP4C|92421|charged multivesicular body protein 4C##AK314873|CHMP4C|92421|charged multivesicular body protein 4C##AK000049|CHMP4C|92421|charged multivesicular body protein 4C##AY329086|CHMP4C|92421|charged multivesicular body protein 4C##AB120734|CHMP4C|92421|charged multivesicular body protein 4C##CR457323|ZFAND1|79752|zinc finger, AN1-type domain 1##BC051857|ZFAND1|79752|zinc finger, AN1-type domain 1##AK304111|ZFAND1|79752|zinc finger, AN1-type domain 1##BC056877|ZFAND1|79752|zinc finger, AN1-type domain 1##BC022251|ZFAND1|79752|zinc finger, AN1-type domain 1##AK024069|ZFAND1|79752|zinc finger, AN1-type domain 1##AK225195|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170796|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001170797|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_024699|ZFAND1|79752|zinc finger, AN1-type domain 1##NM_001100392|RALYL|138046|RALY RNA binding protein-like##NM_001100393|RALYL|138046|RALY RNA binding protein-like##AK095560|RALYL|138046|RALY RNA binding protein-like##AK094543|RALYL|138046|RALY RNA binding protein-like##AF495529|RALYL|138046|RALY RNA binding protein-like##AF495530|RALYL|138046|RALY RNA binding protein-like##NM_173848|RALYL|138046|RALY RNA binding protein-like##AK095026|RALYL|138046|RALY RNA binding protein-like	0.182613	
chr9	96671423	96671515	reg1044805.p2	3.429	+	TSC_hg19_v1_chr9_+_96339042 NM_005392 BC064613 AB014562 BC152437 AL834263	-332546	+	BC007879 TSC_hg19_v1_chr9_+_96233575	-437972	+	AK056096 NM_198841	-455596	-	TSC_hg19_v1_chr9_-_96717589 AF213356 NM_021570	46113	-	TSC_hg19_v1_chr9_-_96717638 BC064363	46170	-	TSC_hg19_v1_chr9_+_96793094 AY171233 NM_177995 BC067120 NM_001253830 BC051654	121646	+	NM_005392|PHF2|5253|PHD finger protein 2##BC064613|PHF2|5253|PHD finger protein 2##AB014562|PHF2|5253|PHD finger protein 2##BC152437|PHF2|5253|PHD finger protein 2##AL834263|PHF2|5253|PHD finger protein 2##BC007879|FAM120A|23196|family with sequence similarity 120A##AK056096|FAM120AOS|158293|family with sequence similarity 120A opposite strand##NM_198841|FAM120AOS|158293|family with sequence similarity 120A opposite strand##AF213356|BARX1|56033|BARX homeobox 1##NM_021570|BARX1|56033|BARX homeobox 1##BC064363|BARX1|56033|BARX homeobox 1##AY171233|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_177995|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC067120|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##NM_001253830|PTPDC1|138639|protein tyrosine phosphatase domain containing 1##BC051654|PTPDC1|138639|protein tyrosine phosphatase domain containing 1	0.170058	
chr15	82573887	82574009	reg1010750.p2	3.428	+	TSC_hg19_v1_chr15_+_82555158 AL833762 NM_001008226 BC144647 AK304339	-18795	+	TSC_hg19_v1_chr15_-_82555076 NM_001040610 NM_024580	-18859	-	BC014628 TSC_hg19_v1_chr15_-_82555043 AK300348 AK056656 BX538332	-18917	-	NM_001164465	67757	-	TSC_hg19_v1_chr15_+_82647308 BC066934	73383	+	NM_198181 CR936812	148268	+	AL833762|FAM154B|283726|family with sequence similarity 154, member B##NM_001008226|FAM154B|283726|family with sequence similarity 154, member B##AK304339|FAM154B|283726|family with sequence similarity 154, member B##NM_001040610|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_024580|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BC014628|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK300348|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##AK056656|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##BX538332|EFTUD1|79631|elongation factor Tu GTP binding domain containing 1##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9	0.0	
chr16	2516021	2516157	reg1035780.p2	3.428	+	AK128408 TSC_hg19_v1_chr16_+_2510099 NM_025108 AK093788 AK301929 AX748307 BC018719 AK023971	-5977	+	TSC_hg19_v1_chr16_+_2479464 Z36714 AK313371 U17105 BC012349 AB208829 DQ890775	-36640	+	TSC_hg19_v1_chr16_+_2479392 NM_001761	-36698	+	NM_006181 U86759	5410	+	TSC_hg19_v1_chr16_+_2525149 BC112389 NM_001199107 NM_020705 AB032997	9042	+	TSC_hg19_v1_chr16_+_2563709 NM_001198569 M62762 NM_001694	47695	+	AK128408|C16orf59|80178|chromosome 16 open reading frame 59##NM_025108|C16orf59|80178|chromosome 16 open reading frame 59##AK093788|C16orf59|80178|chromosome 16 open reading frame 59##AK301929|C16orf59|80178|chromosome 16 open reading frame 59##BC018719|C16orf59|80178|chromosome 16 open reading frame 59##AK023971|C16orf59|80178|chromosome 16 open reading frame 59##Z36714|CCNF|899|cyclin F##AK313371|CCNF|899|cyclin F##U17105|CCNF|899|cyclin F##BC012349|CCNF|899|cyclin F##AB208829|CCNF|899|cyclin F##DQ890775|CCNF|899|cyclin F##NM_001761|CCNF|899|cyclin F##NM_006181|NTN3|4917|netrin 3##U86759|NTN3|4917|netrin 3##BC112389|TBC1D24|57465|TBC1 domain family, member 24##NM_001199107|TBC1D24|57465|TBC1 domain family, member 24##NM_020705|TBC1D24|57465|TBC1 domain family, member 24##AB032997|TBC1D24|57465|TBC1 domain family, member 24##NM_001198569|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##M62762|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c##NM_001694|ATP6V0C|527|ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c	0.0	
chr17	73150458	73150618	reg1041237.p1	3.428	+	TSC_hg19_v1_chr17_-_73127869 CU692564 BC002516 BC022334 BC008183 BC047763 BC017454 AF154829 AK000419 NM_001252377 NM_014595	-22681	-	TSC_hg19_v1_chr17_+_73106069 AK300997 AK310697 BC011728 NM_024585	-44484	+	TSC_hg19_v1_chr17_+_73084056 BC009684 NM_004695	-66483	+	DQ891909 DQ895094 DQ896835 EU176653 CU674698 AF177862 BC001420 TSC_hg19_v1_chr17_-_73150608 AF266846 AK223321 AK312613	14	-	AY322169 AY322170 NM_001002032 NM_001002033 NM_016185 AF086910	235	-	DQ893036 DQ896277 AB528658 L76416 TSC_hg19_v1_chr17_-_73179000 AK024823 BC107853 AK225090 BC062713 X99585 AK225263	28433	-	BC002516|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC022334|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC008183|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC047763|NT5C|30833|5', 3'-nucleotidase, cytosolic##BC017454|NT5C|30833|5', 3'-nucleotidase, cytosolic##AF154829|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK000419|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_001252377|NT5C|30833|5', 3'-nucleotidase, cytosolic##NM_014595|NT5C|30833|5', 3'-nucleotidase, cytosolic##AK300997|ARMC7|79637|armadillo repeat containing 7##BC011728|ARMC7|79637|armadillo repeat containing 7##NM_024585|ARMC7|79637|armadillo repeat containing 7##BC009684|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##NM_004695|SLC16A5|9121|solute carrier family 16, member 5 (monocarboxylic acid transporter 6)##DQ891909|HN1|51155|hematological and neurological expressed 1##DQ895094|HN1|51155|hematological and neurological expressed 1##DQ896835|HN1|51155|hematological and neurological expressed 1##EU176653|HN1|51155|hematological and neurological expressed 1##AF177862|HN1|51155|hematological and neurological expressed 1##BC001420|HN1|51155|hematological and neurological expressed 1##AF266846|HN1|51155|hematological and neurological expressed 1##AK223321|HN1|51155|hematological and neurological expressed 1##AK312613|HN1|51155|hematological and neurological expressed 1##AY322169|HN1|51155|hematological and neurological expressed 1##AY322170|HN1|51155|hematological and neurological expressed 1##NM_001002032|HN1|51155|hematological and neurological expressed 1##NM_001002033|HN1|51155|hematological and neurological expressed 1##NM_016185|HN1|51155|hematological and neurological expressed 1##AF086910|HN1|51155|hematological and neurological expressed 1##DQ893036|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##DQ896277|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##L76416|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##AK024823|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC107853|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##AK225090|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##BC062713|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##X99585|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)##AK225263|SUMO2|6613|SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)	0.0	
chr17	78764046	78764163	reg1033653.p2	3.428	+	BC008754 AK055912 TSC_hg19_v1_chr17_+_78518849	-245286	+	TSC_hg19_v1_chr17_+_78518628 AK295964 NM_001163034 NM_020761 AK296321 BC064515	-245455	+	EU831771 EU831849 BC089441 TSC_hg19_v1_chr17_-_78450408 U61849 AK127335 NM_002522	-313777	-	TSC_hg19_v1_chr17_+_78935064 BC073898	171028	+	TSC_hg19_v1_chr17_+_78965640 NM_024591	201537	+	TSC_hg19_v1_chr17_+_78965674 AK292105 AK223187 BC010108 AK021811 CU679625 AY329087 CR457284	201590	+	AK055912|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK295964|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_001163034|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_020761|RPTOR|57521|regulatory associated protein of MTOR, complex 1##AK296321|RPTOR|57521|regulatory associated protein of MTOR, complex 1##BC064515|RPTOR|57521|regulatory associated protein of MTOR, complex 1##EU831771|NPTX1|4884|neuronal pentraxin I##EU831849|NPTX1|4884|neuronal pentraxin I##BC089441|NPTX1|4884|neuronal pentraxin I##U61849|NPTX1|4884|neuronal pentraxin I##AK127335|NPTX1|4884|neuronal pentraxin I##NM_002522|NPTX1|4884|neuronal pentraxin I##BC073898|RPTOR|57521|regulatory associated protein of MTOR, complex 1##NM_024591|CHMP6|79643|charged multivesicular body protein 6##AK292105|CHMP6|79643|charged multivesicular body protein 6##AK223187|CHMP6|79643|charged multivesicular body protein 6##BC010108|CHMP6|79643|charged multivesicular body protein 6##AK021811|CHMP6|79643|charged multivesicular body protein 6##AY329087|CHMP6|79643|charged multivesicular body protein 6##CR457284|CHMP6|79643|charged multivesicular body protein 6	0.0	
chr19	5535072	5535180	reg1039541.p1	3.428	+	AK098722 NM_181710 AK292251 BC017592	-79700	+	TSC_hg19_v1_chr19_-_5340824 AB209333 NM_002850 NM_130853 NM_130854 NM_130855	-194332	-	TSC_hg19_v1_chr19_+_5032899 CU687848	-502227	+	AB463241 BC014784 D50928 AK300501 BC001216 BC025279 AK296552 TSC_hg19_v1_chr19_-_5622788	87632	-	TSC_hg19_v1_chr19_-_5622794 NM_014649	87739	-	NM_001201338 NM_001201339 NM_001201340 NM_002967 TSC_hg19_v1_chr19_+_5623093 AK294718	87946	+	AK098722|ZNRF4|148066|zinc and ring finger 4##NM_181710|ZNRF4|148066|zinc and ring finger 4##AK292251|ZNRF4|148066|zinc and ring finger 4##BC017592|ZNRF4|148066|zinc and ring finger 4##AB209333|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_002850|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130853|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130854|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##NM_130855|PTPRS|5802|protein tyrosine phosphatase, receptor type, S##BC014784|SAFB2|9667|scaffold attachment factor B2##D50928|SAFB2|9667|scaffold attachment factor B2##AK300501|SAFB2|9667|scaffold attachment factor B2##BC001216|SAFB2|9667|scaffold attachment factor B2##BC025279|SAFB2|9667|scaffold attachment factor B2##AK296552|SAFB2|9667|scaffold attachment factor B2##NM_014649|SAFB2|9667|scaffold attachment factor B2##NM_001201338|SAFB|6294|scaffold attachment factor B##NM_001201339|SAFB|6294|scaffold attachment factor B##NM_001201340|SAFB|6294|scaffold attachment factor B##NM_002967|SAFB|6294|scaffold attachment factor B##AK294718|SAFB|6294|scaffold attachment factor B	0.913588	CTCF.p2:17:0.914
chr20	36933408	36933507	reg1037676.p2	3.428	+	NM_001725 BC040955 TSC_hg19_v1_chr20_+_36932591 AK315328 AX713278 AX746123 AX752831 J04739 AK296568 BC032230 CU691936 DQ414688 AF322588	-869	+	AK096202 NM_001029864	-44284	-	TSC_hg19_v1_chr20_-_36793673 AK291714 AK058031 AK295775 AK300292 AK314618 BC003551 NM_004613 NM_198951	-139778	-	TSC_hg19_v1_chr20_+_36974884 AK313625 BC022256 NM_004139 AY344471 AF105067 AB590524 CU692512 DQ891394 DQ894434 M35533	41414	+	TSC_hg19_v1_chr20_-_37063964 BC012894 BC052370 BC032119 BX640887	130515	-	TSC_hg19_v1_chr20_+_37075314 AK055434 AK290212 AF454939 AF497716 BC021083 BC040237	141870	+	NM_001725|BPI|671|bactericidal/permeability-increasing protein##BC040955|BPI|671|bactericidal/permeability-increasing protein##AK315328|BPI|671|bactericidal/permeability-increasing protein##AX713278|BPI|671|bactericidal/permeability-increasing protein##AX746123|BPI|671|bactericidal/permeability-increasing protein##AX752831|BPI|671|bactericidal/permeability-increasing protein##J04739|BPI|671|bactericidal/permeability-increasing protein##AK296568|BPI|671|bactericidal/permeability-increasing protein##BC032230|BPI|671|bactericidal/permeability-increasing protein##DQ414688|BPI|671|bactericidal/permeability-increasing protein##AF322588|BPI|671|bactericidal/permeability-increasing protein##AK096202|KIAA1755|85449|KIAA1755##NM_001029864|KIAA1755|85449|KIAA1755##AK291714|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK058031|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK295775|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK300292|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK314618|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##BC003551|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_004613|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##NM_198951|TGM2|7052|transglutaminase 2 (C polypeptide, protein-glutamine-gamma-glutamyltransferase)##AK313625|LBP|3929|lipopolysaccharide binding protein##BC022256|LBP|3929|lipopolysaccharide binding protein##NM_004139|LBP|3929|lipopolysaccharide binding protein##AY344471|LBP|3929|lipopolysaccharide binding protein##AF105067|LBP|3929|lipopolysaccharide binding protein##DQ891394|LBP|3929|lipopolysaccharide binding protein##DQ894434|LBP|3929|lipopolysaccharide binding protein##M35533|LBP|3929|lipopolysaccharide binding protein##BC012894|LOC388796|388796|uncharacterized LOC388796##BC052370|LOC388796|388796|uncharacterized LOC388796##BC032119|LOC388796|388796|uncharacterized LOC388796##BX640887|LOC388796|388796|uncharacterized LOC388796##AK055434|SNHG11|128439|small nucleolar RNA host gene 11 (non-protein coding)##BC040237|SNHG11|128439|small nucleolar RNA host gene 11 (non-protein coding)	0.113345	
chr20	40476946	40477057	reg1037187.p1	3.428	+	TSC_hg19_v1_chr20_-_40247013 BC039860 BC040016 AK296955 BC012516 AY034072 NM_032221	-229940	-	AB089149 NM_052846	-481504	-	TSC_hg19_v1_chr20_+_39969434 BX647082 NM_022896 BC140806 BC144598	-507486	+	AB006621 BC153300 TSC_hg19_v1_chr20_-_41818547 AF043644 NM_007050 NM_133170	1341509	-	TSC_hg19_v1_chr20_+_42086514 NM_006275	1609491	+	TSC_hg19_v1_chr20_+_42086535 AK291203 AK300411 AB208976 BC006832 U30828 U30829 U30883 CU675469 AB451251 AB451375	1609602	+	BC039860|CHD6|84181|chromodomain helicase DNA binding protein 6##BC040016|CHD6|84181|chromodomain helicase DNA binding protein 6##AK296955|CHD6|84181|chromodomain helicase DNA binding protein 6##BC012516|CHD6|84181|chromodomain helicase DNA binding protein 6##AY034072|CHD6|84181|chromodomain helicase DNA binding protein 6##NM_032221|CHD6|84181|chromodomain helicase DNA binding protein 6##AB089149|EMILIN3|90187|elastin microfibril interfacer 3##NM_052846|EMILIN3|90187|elastin microfibril interfacer 3##BX647082|LPIN3|64900|lipin 3##NM_022896|LPIN3|64900|lipin 3##BC140806|LPIN3|64900|lipin 3##BC144598|LPIN3|64900|lipin 3##AB006621|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##BC153300|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##AF043644|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_007050|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_133170|PTPRT|11122|protein tyrosine phosphatase, receptor type, T##NM_006275|SRSF6|6431|serine/arginine-rich splicing factor 6##AK291203|SRSF6|6431|serine/arginine-rich splicing factor 6##AK300411|SRSF6|6431|serine/arginine-rich splicing factor 6##AB208976|SRSF6|6431|serine/arginine-rich splicing factor 6##BC006832|SRSF6|6431|serine/arginine-rich splicing factor 6##U30828|SRSF6|6431|serine/arginine-rich splicing factor 6##U30883|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451251|SRSF6|6431|serine/arginine-rich splicing factor 6##AB451375|SRSF6|6431|serine/arginine-rich splicing factor 6	0.800318	CTCF.p2:5:0.800
chr21	43758544	43758725	reg1003663.p2	3.428	+	NM_003226 AF432265	-22902	-	L08044 DQ891963 DQ895153 L15203 BC017859 TSC_hg19_v1_chr21_-_43735520	-23143	-	TSC_hg19_v1_chr21_+_43710190 AF038175	-48421	+	X51698 BC032820 NM_005423	12504	-	M12075 BC032811 NM_003225 X00474 X52003	27988	-	AY358458 AF201380 AF267741 AK172842 AB038157 AB038160 NM_024022 NM_032405	57527	-	NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##L08044|TFF3|7033|trefoil factor 3 (intestinal)##DQ891963|TFF3|7033|trefoil factor 3 (intestinal)##DQ895153|TFF3|7033|trefoil factor 3 (intestinal)##L15203|TFF3|7033|trefoil factor 3 (intestinal)##BC017859|TFF3|7033|trefoil factor 3 (intestinal)##AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2##M12075|TFF1|7031|trefoil factor 1##BC032811|TFF1|7031|trefoil factor 1##NM_003225|TFF1|7031|trefoil factor 1##X00474|TFF1|7031|trefoil factor 1##X52003|TFF1|7031|trefoil factor 1##AY358458|TMPRSS3|64699|transmembrane protease, serine 3##AF201380|TMPRSS3|64699|transmembrane protease, serine 3##AF267741|TMPRSS3|64699|transmembrane protease, serine 3##AK172842|TMPRSS3|64699|transmembrane protease, serine 3##AB038157|TMPRSS3|64699|transmembrane protease, serine 3##AB038160|TMPRSS3|64699|transmembrane protease, serine 3##NM_024022|TMPRSS3|64699|transmembrane protease, serine 3##NM_032405|TMPRSS3|64699|transmembrane protease, serine 3	0.0	
chr2	74799440	74799564	reg1046253.p1	3.428	+	AK222883 TSC_hg19_v1_chr2_+_74781875 BC111055 U70987 BC114440 AK127127 AK127656 AK314678 BC114497 AK296154 AB587402 AF180527 AK300097	-17639	+	NM_001381	-17991	+	AF311313 NM_032603 AF284815 AF282619 AK309474	-18428	-	BC025997 NM_138804	75661	-	TSC_hg19_v1_chr2_+_74881437 AK095587 AK312728 AL136552 NM_004263 AK075384 AK304358 AK291023 BC018361 BC038411 AK308166 AB021292 AB022317 AB463247 AM393735 CU676238 CU691566 DQ895677	81926	+	AF086198 NM_000189	260279	+	AK222883|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC111055|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##U70987|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC114440|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK127127|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK127656|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK314678|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##BC114497|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK296154|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF180527|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AK300097|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##NM_001381|DOK1|1796|docking protein 1, 62kDa (downstream of tyrosine kinase 1)##AF311313|LOXL3|84695|lysyl oxidase-like 3##NM_032603|LOXL3|84695|lysyl oxidase-like 3##AF284815|LOXL3|84695|lysyl oxidase-like 3##AF282619|LOXL3|84695|lysyl oxidase-like 3##AK309474|LOXL3|84695|lysyl oxidase-like 3##BC025997|C2orf65|130951|chromosome 2 open reading frame 65##NM_138804|C2orf65|130951|chromosome 2 open reading frame 65##AK312728|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AL136552|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##NM_004263|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK075384|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK304358|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK291023|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC018361|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##BC038411|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AK308166|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AB021292|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AB022317|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AM393735|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##DQ895677|SEMA4F|10505|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F##AF086198|HK2|3099|hexokinase 2##NM_000189|HK2|3099|hexokinase 2	0.0	
chr3	53021094	53021204	reg1036382.p1	3.428	+	TSC_hg19_v1_chr3_-_52931595 NM_001198974 NM_198563	-89492	-	TSC_hg19_v1_chr3_-_52931547 AY726591 BC047015	-89700	-	NM_205853	-151915	-	TSC_hg19_v1_chr3_-_53079286 NM_001005159	58160	-	TSC_hg19_v1_chr3_-_53080023 BC014614 AF168132	58845	-	TSC_hg19_v1_chr3_-_53080045 AK313965 NM_001005158 NM_016329	58914	-	NM_001198974|TMEM110-MUSTN1|100526772|TMEM110-MUSTN1 readthrough##NM_198563|TMEM110|375346|transmembrane protein 110##AY726591|TMEM110|375346|transmembrane protein 110##BC047015|TMEM110|375346|transmembrane protein 110##NM_205853|MUSTN1|389125|musculoskeletal, embryonic nuclear protein 1##NM_001005159|SFMBT1|51460|Scm-like with four mbt domains 1##BC014614|SFMBT1|51460|Scm-like with four mbt domains 1##AF168132|SFMBT1|51460|Scm-like with four mbt domains 1##AK313965|SFMBT1|51460|Scm-like with four mbt domains 1##NM_001005158|SFMBT1|51460|Scm-like with four mbt domains 1##NM_016329|SFMBT1|51460|Scm-like with four mbt domains 1	0.543495	CTCF.p2:33:0.543
chr4	132740294	132740403	reg1035160.p2	3.428	+	NM_001099783	-2723067	+	NM_173487 AK091022 AX746735 AK309229 BX538164 BC032582	-2725481	+	BC014677 BC040258 BC121058 BC121057 BC128051 TSC_hg19_v1_chr4_-_130014737 BC064428 AK055217 NM_144643	-2725758	-	TSC_hg19_v1_chr4_+_134070448 AB037821 AY013874 NM_020815 NM_032961	1330108	+	AK024636 TSC_hg19_v1_chr4_+_134073255 AL157470	1332935	+	NM_001114734 TSC_hg19_v1_chr4_-_135122935	2382570	-	NM_001099783|C4orf33|132321|chromosome 4 open reading frame 33##NM_173487|C4orf33|132321|chromosome 4 open reading frame 33##AK091022|C4orf33|132321|chromosome 4 open reading frame 33##AK309229|C4orf33|132321|chromosome 4 open reading frame 33##BX538164|C4orf33|132321|chromosome 4 open reading frame 33##BC032582|C4orf33|132321|chromosome 4 open reading frame 33##BC014677|SCLT1|132320|sodium channel and clathrin linker 1##BC040258|SCLT1|132320|sodium channel and clathrin linker 1##BC121058|SCLT1|132320|sodium channel and clathrin linker 1##BC121057|SCLT1|132320|sodium channel and clathrin linker 1##BC128051|SCLT1|132320|sodium channel and clathrin linker 1##BC064428|SCLT1|132320|sodium channel and clathrin linker 1##AK055217|SCLT1|132320|sodium channel and clathrin linker 1##NM_144643|SCLT1|132320|sodium channel and clathrin linker 1##AB037821|PCDH10|57575|protocadherin 10##AY013874|PCDH10|57575|protocadherin 10##NM_020815|PCDH10|57575|protocadherin 10##NM_032961|PCDH10|57575|protocadherin 10##AK024636|PCDH10|57575|protocadherin 10##AL157470|PCDH10|57575|protocadherin 10##NM_001114734|PABPC4L|132430|poly(A) binding protein, cytoplasmic 4-like	0.990956	CTCF.p2:5:0.980
chr4	71768832	71769013	reg1043373.p2	3.428	+	NM_001244766 NM_001244767 NM_173468 AK093545 AX748194 TSC_hg19_v1_chr4_+_71768085 AK299481 BC038112 AK313513	-809	+	TSC_hg19_v1_chr4_-_71705615 NM_002092 AK296287	-63285	-	TSC_hg19_v1_chr4_-_71705608 U07231 AK127161 AK090755 AK055499 AK056891 AK095799 AK097055 AK124124 BC040485	-63345	-	TSC_hg19_v1_chr4_+_71859320 NM_000788 AK303292 AK313523 BC103764	90385	+	M60527 TSC_hg19_v1_chr4_+_71859434 BC114617 JF806429 BT019941 BT019942 CR536527 CR541876	90549	+	TSC_hg19_v1_chr4_+_72052481 AF011390 NM_001098484 NM_001134742 AK307594 AF157492	283801	+	NM_001244766|MOB1B|92597|MOB kinase activator 1B##NM_001244767|MOB1B|92597|MOB kinase activator 1B##NM_173468|MOB1B|92597|MOB kinase activator 1B##AK093545|MOB1B|92597|MOB kinase activator 1B##AK299481|MOB1B|92597|MOB kinase activator 1B##BC038112|MOB1B|92597|MOB kinase activator 1B##AK313513|MOB1B|92597|MOB kinase activator 1B##NM_002092|GRSF1|2926|G-rich RNA sequence binding factor 1##AK296287|GRSF1|2926|G-rich RNA sequence binding factor 1##U07231|GRSF1|2926|G-rich RNA sequence binding factor 1##AK127161|GRSF1|2926|G-rich RNA sequence binding factor 1##AK090755|GRSF1|2926|G-rich RNA sequence binding factor 1##AK055499|GRSF1|2926|G-rich RNA sequence binding factor 1##AK056891|GRSF1|2926|G-rich RNA sequence binding factor 1##AK095799|GRSF1|2926|G-rich RNA sequence binding factor 1##AK097055|GRSF1|2926|G-rich RNA sequence binding factor 1##AK124124|GRSF1|2926|G-rich RNA sequence binding factor 1##BC040485|GRSF1|2926|G-rich RNA sequence binding factor 1##NM_000788|DCK|1633|deoxycytidine kinase##AK303292|DCK|1633|deoxycytidine kinase##AK313523|DCK|1633|deoxycytidine kinase##BC103764|DCK|1633|deoxycytidine kinase##M60527|DCK|1633|deoxycytidine kinase##BC114617|DCK|1633|deoxycytidine kinase##JF806429|DCK|1633|deoxycytidine kinase##BT019941|DCK|1633|deoxycytidine kinase##BT019942|DCK|1633|deoxycytidine kinase##CR536527|DCK|1633|deoxycytidine kinase##CR541876|DCK|1633|deoxycytidine kinase##AF011390|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001098484|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##NM_001134742|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AK307594|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4##AF157492|SLC4A4|8671|solute carrier family 4, sodium bicarbonate cotransporter, member 4	0.0	
chr5	6583566	6583633	reg1026071.p2	3.428	+	TSC_hg19_v1_chr5_+_6449114 AK057805	-134410	+	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	-134746	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	-204949	-	TSC_hg19_v1_chr5_-_6633158 AK291144 BC137083 AK298980	49555	-	TSC_hg19_v1_chr5_-_6633411 AK055456 AB255451 NM_001193455 NM_017755	49810	-	NM_001047 TSC_hg19_v1_chr5_+_6633508	49911	+	AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##AK291144|NSUN2|54888|NOP2/Sun domain family, member 2##BC137083|NSUN2|54888|NOP2/Sun domain family, member 2##AK298980|NSUN2|54888|NOP2/Sun domain family, member 2##AK055456|NSUN2|54888|NOP2/Sun domain family, member 2##AB255451|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001193455|NSUN2|54888|NOP2/Sun domain family, member 2##NM_017755|NSUN2|54888|NOP2/Sun domain family, member 2##NM_001047|SRD5A1|6715|steroid-5-alpha-reductase, alpha polypeptide 1 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 1)	0.0	
chr6	135651786	135651891	reg1042453.p1	3.428	+	TSC_hg19_v1_chr6_+_135517056 X17469	-134749	+	TSC_hg19_v1_chr6_+_135516916 AJ616799	-134932	+	TSC_hg19_v1_chr6_+_135502539 AJ616235 M15024 AJ616791 AF104863 AB527731 AY787443 AY787444 AY787445 AY787446 AY787447 AY787448 AY787449 AY787450 AY787451 AY787452 AY787453 AY787454 AY787455 AY787456 AY787457 AY787458 AY787459 AY787460 AY787461 AY787462 AY787463 AY787464 AY787465 AY787466 AY787467 AY787468 AY787469 AY787470 AY787471 AY787472 AY787473 AY787474 AY787475	-149252	+	AY133243 TSC_hg19_v1_chr6_-_135818858 DQ090887	166987	-	TSC_hg19_v1_chr6_-_135818879 AK092262 AX747438 BC094800 AJ459824 AJ459825 AJ606362 NM_001134830 NM_001134831 NM_001134832 NM_017651	167047	-	BC127001 BC127000 TSC_hg19_v1_chr6_+_135818964 BC040979	167126	+	X17469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616235|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##M15024|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AJ616791|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AF104863|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787443|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787444|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787445|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787446|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787447|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787448|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787449|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787450|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787451|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787452|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787453|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787454|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787455|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787456|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787457|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787458|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787459|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787460|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787461|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787462|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787463|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787464|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787465|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787466|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787467|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787468|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787469|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787470|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787471|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787472|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787473|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787474|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY787475|MYB|4602|v-myb myeloblastosis viral oncogene homolog (avian)##AY133243|AHI1|54806|Abelson helper integration site 1##DQ090887|AHI1|54806|Abelson helper integration site 1##AK092262|AHI1|54806|Abelson helper integration site 1##BC094800|AHI1|54806|Abelson helper integration site 1##AJ459824|AHI1|54806|Abelson helper integration site 1##AJ459825|AHI1|54806|Abelson helper integration site 1##AJ606362|AHI1|54806|Abelson helper integration site 1##NM_001134830|AHI1|54806|Abelson helper integration site 1##NM_001134831|AHI1|54806|Abelson helper integration site 1##NM_001134832|AHI1|54806|Abelson helper integration site 1##NM_017651|AHI1|54806|Abelson helper integration site 1##BC127001|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC127000|LINC00271|100131814|long intergenic non-protein coding RNA 271##BC040979|LINC00271|100131814|long intergenic non-protein coding RNA 271	0.0	
chr7	75057038	75057171	reg1041656.p2	3.428	+	AK126486 TSC_hg19_v1_chr7_+_75039644 BC044928 BC103750	-17450	+	AF498998 AF498999 NM_198853 NM_198924 AK309306	-32139	+	AK316130 AY313779 BC108680 AK289466 AK307228 AK309007 BC010433 TSC_hg19_v1_chr7_+_74988510 AK303592 BC066937	-68534	+	AB354586 TSC_hg19_v1_chr7_-_75072021	14907	-	TSC_hg19_v1_chr7_-_75115568 BC082993 NM_001099415	58465	-	NM_001099435	67194	+	AK126486|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC044928|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##BC103750|NSUN5P1|155400|NOP2/Sun domain family, member 5 pseudogene 1##AF498998|TRIM73|375593|tripartite motif containing 73##AF498999|TRIM74|378108|tripartite motif containing 74##NM_198853|TRIM74|378108|tripartite motif containing 74##NM_198924|TRIM73|375593|tripartite motif containing 73##AK316130|STAG3L1|54441|stromal antigen 3-like 1##AY313779|STAG3L3|442578|stromal antigen 3-like 3##BC108680|STAG3L3|442578|stromal antigen 3-like 3##AK289466|STAG3L1|54441|stromal antigen 3-like 1##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2##BC010433|STAG3L1|54441|stromal antigen 3-like 1##AK303592|STAG3L3|442578|stromal antigen 3-like 3##BC066937|STAG3L3|442578|stromal antigen 3-like 3##AB354586|POM121C|100101267|POM121 membrane glycoprotein C##BC082993|POM121C|100101267|POM121 membrane glycoprotein C##NM_001099415|POM121C|100101267|POM121 membrane glycoprotein C##NM_001099435|SPDYE5|442590|speedy homolog E5 (Xenopus laevis)	0.0	
chr7	88048612	88048694	reg1045017.p1	3.428	+	BC020600 AF423422 AF423423 AK026806 AK307644 TSC_hg19_v1_chr7_-_87936207 NM_001205315 NM_001205316 NM_024636	-112439	-	TSC_hg19_v1_chr7_-_87856292 AK296601 NM_198901	-192359	-	TSC_hg19_v1_chr7_-_87849391 AK129770 AK310366 NM_003130	-199248	-	BC140826 BC140829 AK056672 AY295769 NM_181646	340063	+	BC028365 NM_152706	376377	-	NM_012449 TSC_hg19_v1_chr7_+_89783782 AK308452 BC011802	1735084	+	BC020600|STEAP4|79689|STEAP family member 4##AF423422|STEAP4|79689|STEAP family member 4##AF423423|STEAP4|79689|STEAP family member 4##AK026806|STEAP4|79689|STEAP family member 4##AK307644|STEAP4|79689|STEAP family member 4##NM_001205315|STEAP4|79689|STEAP family member 4##NM_001205316|STEAP4|79689|STEAP family member 4##NM_024636|STEAP4|79689|STEAP family member 4##AK296601|SRI|6717|sorcin##NM_198901|SRI|6717|sorcin##AK129770|SRI|6717|sorcin##AK310366|SRI|6717|sorcin##NM_003130|SRI|6717|sorcin##BC140826|ZNF804B|219578|zinc finger protein 804B##BC140829|ZNF804B|219578|zinc finger protein 804B##AK056672|ZNF804B|219578|zinc finger protein 804B##AY295769|ZNF804B|219578|zinc finger protein 804B##NM_181646|ZNF804B|219578|zinc finger protein 804B##BC028365|C7orf62|219557|chromosome 7 open reading frame 62##NM_152706|C7orf62|219557|chromosome 7 open reading frame 62##NM_012449|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##AK308452|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1##BC011802|STEAP1|26872|six transmembrane epithelial antigen of the prostate 1	0.0	
chr8	34137380	34137483	reg1046341.p1	3.428	+	TSC_hg19_v1_chr8_-_33457497 AB158288 AK055704	-679936	-	AB237597 AB103376 AY902194 BC001613 NM_024025 TSC_hg19_v1_chr8_-_33457473	-679972	-	TSC_hg19_v1_chr8_-_33457295 BC067804	-680144	-	TSC_hg19_v1_chr8_+_35092994 AY358147 NM_080872	955556	+	NM_001031836 AK302391 BC028701	2504439	+	TSC_hg19_v1_chr8_-_37457377 AK025743	3319937	-	AB158288|DUSP26|78986|dual specificity phosphatase 26 (putative)##AK055704|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB237597|DUSP26|78986|dual specificity phosphatase 26 (putative)##AB103376|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY902194|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC001613|DUSP26|78986|dual specificity phosphatase 26 (putative)##NM_024025|DUSP26|78986|dual specificity phosphatase 26 (putative)##BC067804|DUSP26|78986|dual specificity phosphatase 26 (putative)##AY358147|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_080872|UNC5D|137970|unc-5 homolog D (C. elegans)##NM_001031836|KCNU1|157855|potassium channel, subfamily U, member 1##AK302391|KCNU1|157855|potassium channel, subfamily U, member 1##BC028701|KCNU1|157855|potassium channel, subfamily U, member 1##AK025743|LOC157860|157860|uncharacterized LOC157860	0.0	
chr9	1556480	1556593	reg1045545.p2	3.428	+	AF130729 NM_181872	-505927	+	TSC_hg19_v1_chr9_+_1050370 Y19052	-506166	+	TSC_hg19_v1_chr9_+_1050356 BX647565 NM_006557 BC030204 NM_001130865 AF284221 AF284222	-506192	+	BC068252 AK296373 TSC_hg19_v1_chr9_+_2015346 AK299683 BC040029 NM_003070 NM_139045	458760	+	TSC_hg19_v1_chr9_+_2621791 NM_001018056 NM_003383 L20470 AB208822	1065271	+	BC136562 BC144245 L22431 TSC_hg19_v1_chr9_+_2622097	1065538	+	AF130729|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_181872|DMRT2|10655|doublesex and mab-3 related transcription factor 2##Y19052|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BX647565|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_006557|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC030204|DMRT2|10655|doublesex and mab-3 related transcription factor 2##NM_001130865|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284221|DMRT2|10655|doublesex and mab-3 related transcription factor 2##AF284222|DMRT2|10655|doublesex and mab-3 related transcription factor 2##BC068252|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK296373|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##AK299683|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##BC040029|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_003070|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_139045|SMARCA2|6595|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2##NM_001018056|VLDLR|7436|very low density lipoprotein receptor##NM_003383|VLDLR|7436|very low density lipoprotein receptor##L20470|VLDLR|7436|very low density lipoprotein receptor##AB208822|VLDLR|7436|very low density lipoprotein receptor##BC136562|VLDLR|7436|very low density lipoprotein receptor##BC144245|VLDLR|7436|very low density lipoprotein receptor##L22431|VLDLR|7436|very low density lipoprotein receptor	0.0	
chr9	385942	386042	reg1035335.p1	3.428	+	TSC_hg19_v1_chr9_+_273045 HM991479 NM_001190458 NM_001193536 AK093572 AX748209 HM991480 BC045629 AK310555 BC130518 BC143929	-112939	+	NM_152569	-170100	-	AK293353 TSC_hg19_v1_chr9_+_214867	-171113	+	TSC_hg19_v1_chr9_+_504732 BX648931 AL832454 NM_015158 AK292989 AL833161 AK290028 AB205106	118756	+	AK311119 AB205111 TSC_hg19_v1_chr9_+_684289	298252	+	AB205112 TSC_hg19_v1_chr9_+_686677	300674	+	HM991479|DOCK8|81704|dedicator of cytokinesis 8##NM_001190458|DOCK8|81704|dedicator of cytokinesis 8##NM_001193536|DOCK8|81704|dedicator of cytokinesis 8##AK093572|DOCK8|81704|dedicator of cytokinesis 8##HM991480|DOCK8|81704|dedicator of cytokinesis 8##BC045629|DOCK8|81704|dedicator of cytokinesis 8##AK310555|DOCK8|81704|dedicator of cytokinesis 8##BC130518|DOCK8|81704|dedicator of cytokinesis 8##BC143929|DOCK8|81704|dedicator of cytokinesis 8##NM_152569|C9orf66|157983|chromosome 9 open reading frame 66##AK293353|DOCK8|81704|dedicator of cytokinesis 8##BX648931|KANK1|23189|KN motif and ankyrin repeat domains 1##AL832454|KANK1|23189|KN motif and ankyrin repeat domains 1##NM_015158|KANK1|23189|KN motif and ankyrin repeat domains 1##AK292989|KANK1|23189|KN motif and ankyrin repeat domains 1##AL833161|KANK1|23189|KN motif and ankyrin repeat domains 1##AK290028|KANK1|23189|KN motif and ankyrin repeat domains 1##AB205106|KANK1|23189|KN motif and ankyrin repeat domains 1	0.0	
chr11	19830198	19830284	reg1035851.p1	3.427	+	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	-95375	+	AB063115 NM_001111018 AJ488205	-457926	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-567040	-	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	214147	+	TSC_hg19_v1_chr11_+_20049136 AK307574	218891	+	AK290458 TSC_hg19_v1_chr11_+_20070637	240382	+	AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2##AK290458|NAV2|89797|neuron navigator 2	0.071968	
chr1	12222175	12222331	reg1032944.p2	3.427	+	D86042 BC063482 NM_152942 BC073839 BC141804	-36237	+	M83554 NM_001243 BC136400 BC171762 S75768	-98709	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-142683	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	4808	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	4858	+	TSC_hg19_v1_chr1_+_12290088 NM_015378 NM_018156 AJ608774 AJ608775 AL162331	67854	+	D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_015378|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_018156|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608774|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608775|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AL162331|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)	0.099882	
chr11	33614100	33614187	reg1046301.p1	3.427	+	TSC_hg19_v1_chr11_+_33563772 AK124395 NM_012194	-50319	+	TSC_hg19_v1_chr11_+_33363104 AK304063	-250999	+	TSC_hg19_v1_chr11_+_33350077 AY425958	-264033	+	NM_001166692	108142	-	AK309894 NM_001127223 NM_001127225 NM_001127226	130129	-	NM_001127227	130354	-	AK124395|C11orf41|25758|chromosome 11 open reading frame 41##NM_012194|C11orf41|25758|chromosome 11 open reading frame 41##AK304063|HIPK3|10114|homeodomain interacting protein kinase 3##AY425958|HIPK3|10114|homeodomain interacting protein kinase 3##NM_001166692|C11orf91|100131378|chromosome 11 open reading frame 91##AK309894|CD59|966|CD59 molecule, complement regulatory protein##NM_001127223|CD59|966|CD59 molecule, complement regulatory protein##NM_001127225|CD59|966|CD59 molecule, complement regulatory protein##NM_001127226|CD59|966|CD59 molecule, complement regulatory protein##NM_001127227|CD59|966|CD59 molecule, complement regulatory protein	0.0	
chr11	65308295	65308367	reg1006992.p3	3.427	+	TSC_hg19_v1_chr11_+_65292576 AF297709 BC069233 AK314945 AK302198 AB047077 AB051427 AB051428	-15731	+	TSC_hg19_v1_chr11_+_65292533 NM_001048218 NM_020680	-15794	+	TSC_hg19_v1_chr11_+_65271764 AF001540	-36821	+	TSC_hg19_v1_chr11_-_65314049 AK090750	5778	-	TSC_hg19_v1_chr11_-_65325391 AF135960 BC136277	17118	-	TSC_hg19_v1_chr11_-_65325673 AK024477 NM_001130144 NM_001164266 NM_021070	17537	-	AF297709|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##BC069233|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK314945|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK302198|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB047077|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB051427|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AB051428|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##NM_001048218|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##NM_020680|SCYL1|57410|SCY1-like 1 (S. cerevisiae)##AK090750|LTBP3|4054|latent transforming growth factor beta binding protein 3##AF135960|LTBP3|4054|latent transforming growth factor beta binding protein 3##BC136277|LTBP3|4054|latent transforming growth factor beta binding protein 3##AK024477|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_001130144|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_001164266|LTBP3|4054|latent transforming growth factor beta binding protein 3##NM_021070|LTBP3|4054|latent transforming growth factor beta binding protein 3	0.0	
chr11	77939393	77939476	reg1003179.p1	3.427	+	AK056231 NM_020798 AK301048 AK307875 TSC_hg19_v1_chr11_+_77899953	-39509	+	TSC_hg19_v1_chr11_-_77899673 AK300320 BC036058 NM_001029859 AK095233	-39778	-	TSC_hg19_v1_chr11_+_77850827 AK124949	-88574	+	AB011143 BC152459 NM_012296	113491	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	189372	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	189442	-	AK056231|USP35|57558|ubiquitin specific peptidase 35##NM_020798|USP35|57558|ubiquitin specific peptidase 35##AK301048|USP35|57558|ubiquitin specific peptidase 35##AK307875|USP35|57558|ubiquitin specific peptidase 35##AK300320|KCTD21|283219|potassium channel tetramerisation domain containing 21##BC036058|KCTD21|283219|potassium channel tetramerisation domain containing 21##NM_001029859|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK095233|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK124949|LOC100289388|100289388|uncharacterized LOC100289388##AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##NM_080491|GAB2|9846|GRB2-associated binding protein 2	0.0	
chr13	41885175	41885333	reg1043046.p1	3.427	+	AK055086 AF072934 TSC_hg19_v1_chr13_-_41837713 BC027731 BC038427 BC042196 BC065496 NM_004294 AK294343	-47574	-	TSC_hg19_v1_chr13_-_41768706 AK299614 AL136782 AK315589 BC022033 FJ150424 NM_032138 AK091344 AX746923	-116629	-	CR533558 CU692470 AB464601 AM393035 AM393575 DQ890838 DQ893994 TSC_hg19_v1_chr13_-_41768505	-116797	-	NM_001110798 NM_018527 NM_024561 TSC_hg19_v1_chr13_+_41885376 BC064592 BC032318 AK291248 AK097224 BX640665 BC101719 BC101721 BC143506 CU689326	248	+	TSC_hg19_v1_chr13_+_42031539 NM_014059	146297	+	TSC_hg19_v1_chr13_+_42031685 BC066334	146429	+	AK055086|MTRF1|9617|mitochondrial translational release factor 1##AF072934|MTRF1|9617|mitochondrial translational release factor 1##BC027731|MTRF1|9617|mitochondrial translational release factor 1##BC038427|MTRF1|9617|mitochondrial translational release factor 1##BC042196|MTRF1|9617|mitochondrial translational release factor 1##BC065496|MTRF1|9617|mitochondrial translational release factor 1##NM_004294|MTRF1|9617|mitochondrial translational release factor 1##AK294343|MTRF1|9617|mitochondrial translational release factor 1##AK299614|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AL136782|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK315589|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##BC022033|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##FJ150424|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_032138|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK091344|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##CR533558|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AM393035|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AM393575|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##DQ890838|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##DQ893994|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_001110798|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_018527|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_024561|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC064592|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC032318|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK291248|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK097224|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BX640665|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101719|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101721|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC143506|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15##BC066334|C13orf15|28984|chromosome 13 open reading frame 15	0.0	
chr16	67138143	67138229	reg1040979.p1	3.427	+	TSC_hg19_v1_chr16_+_67063217 AK290462 AK291834 AB463544 AF294326 BT006862 CU676254 DQ890558 DQ893719 L20298 AK311724	-74898	+	TSC_hg19_v1_chr16_+_67063051 BC018509 NM_001755 NM_022845	-75139	+	NM_001190201 NM_001190202 TSC_hg19_v1_chr16_+_67034441 AK094783 AK300792 AK295483 BC041823 BC064573	-103638	+	TSC_hg19_v1_chr16_+_67143864 AF176088 BC004556 NM_025187	5668	+	TSC_hg19_v1_chr16_+_67143927 CU678768	5816	+	AY358485 TSC_hg19_v1_chr16_-_67184866 BC012191 NM_033309	46680	-	AK290462|CBFB|865|core-binding factor, beta subunit##AK291834|CBFB|865|core-binding factor, beta subunit##AF294326|CBFB|865|core-binding factor, beta subunit##BT006862|CBFB|865|core-binding factor, beta subunit##DQ890558|CBFB|865|core-binding factor, beta subunit##DQ893719|CBFB|865|core-binding factor, beta subunit##L20298|CBFB|865|core-binding factor, beta subunit##AK311724|CBFB|865|core-binding factor, beta subunit##BC018509|CBFB|865|core-binding factor, beta subunit##NM_001755|CBFB|865|core-binding factor, beta subunit##NM_022845|CBFB|865|core-binding factor, beta subunit##NM_001190201|CES4A|283848|carboxylesterase 4A##NM_001190202|CES4A|283848|carboxylesterase 4A##AK094783|CES4A|283848|carboxylesterase 4A##AK300792|CES4A|283848|carboxylesterase 4A##AK295483|CES4A|283848|carboxylesterase 4A##BC041823|CES4A|283848|carboxylesterase 4A##BC064573|CES4A|283848|carboxylesterase 4A##AF176088|C16orf70|80262|chromosome 16 open reading frame 70##BC004556|C16orf70|80262|chromosome 16 open reading frame 70##NM_025187|C16orf70|80262|chromosome 16 open reading frame 70##AY358485|B3GNT9|84752|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9##BC012191|B3GNT9|84752|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9##NM_033309|B3GNT9|84752|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9	0.975975	CTCF.p2:19:0.976
chr16	7318279	7318370	reg1042515.p2	3.427	+	AK001027 NM_001142334	-494515	+	TSC_hg19_v1_chr16_+_6533765 BC033885	-784549	+	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	-1249099	+	AF094849 AF109106 AF229057 NM_145891 NM_145892 NM_145893	64426	+	TSC_hg19_v1_chr16_+_8715563 NM_024109 AK315383 BC001908 AK022495	1397216	+	TSC_hg19_v1_chr16_+_8768473 NM_020686 BX537362 AK096146 BC031413 BC015628	1450138	+	AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF094849|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF109106|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF229057|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145891|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145892|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_145893|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_024109|METTL22|79091|methyltransferase like 22##AK315383|METTL22|79091|methyltransferase like 22##BC001908|METTL22|79091|methyltransferase like 22##AK022495|METTL22|79091|methyltransferase like 22##NM_020686|ABAT|18|4-aminobutyrate aminotransferase##BX537362|ABAT|18|4-aminobutyrate aminotransferase##AK096146|ABAT|18|4-aminobutyrate aminotransferase##BC031413|ABAT|18|4-aminobutyrate aminotransferase##BC015628|ABAT|18|4-aminobutyrate aminotransferase	0.925513	CTCF.p2:-11:0.926
chr18	1664217	1664365	reg1034790.p2	3.427	+	NM_001117 BC093837 BC101803 S83513	-758950	+	AK313050 NM_001099733	-759348	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-851988	-	AK290001 BC111020 NM_022840	907164	-	NM_006101 BC005239 TSC_hg19_v1_chr18_+_2571579 AK289396 AK313184 BC035617 BC010171	907254	+	TSC_hg19_v1_chr18_+_2571589 AF017790	907304	+	NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4##NM_006101|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC005239|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK289396|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AK313184|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC035617|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##BC010171|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)##AF017790|NDC80|10403|NDC80 kinetochore complex component homolog (S. cerevisiae)	0.794166	CTCF.p2:16:0.794
chr19	11365485	11365570	reg1038888.p2	3.427	+	TSC_hg19_v1_chr19_+_11350294 NM_018687 AY358356	-15231	+	TSC_hg19_v1_chr19_-_11308465 AK000011 AK225038	-57065	-	TSC_hg19_v1_chr19_-_11308222 BC082762 AB284125 NM_001136191	-57269	-	AB384597 TSC_hg19_v1_chr19_-_11373144 AB037816 BC146786 BC095483 NM_020812	7611	-	AF133424 NM_012466 BC029908	41306	+	AF081353 TSC_hg19_v1_chr19_-_11450305 BC016471 AK313538 NM_004283	84773	-	NM_018687|C19orf80|55908|chromosome 19 open reading frame 80##AY358356|C19orf80|55908|chromosome 19 open reading frame 80##AK000011|KANK2|25959|KN motif and ankyrin repeat domains 2##AK225038|KANK2|25959|KN motif and ankyrin repeat domains 2##BC082762|KANK2|25959|KN motif and ankyrin repeat domains 2##AB284125|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_001136191|KANK2|25959|KN motif and ankyrin repeat domains 2##AB037816|DOCK6|57572|dedicator of cytokinesis 6##BC146786|DOCK6|57572|dedicator of cytokinesis 6##BC095483|DOCK6|57572|dedicator of cytokinesis 6##NM_020812|DOCK6|57572|dedicator of cytokinesis 6##NM_012466|TSPAN16|26526|tetraspanin 16##BC029908|TSPAN16|26526|tetraspanin 16##AF081353|RAB3D|9545|RAB3D, member RAS oncogene family##BC016471|RAB3D|9545|RAB3D, member RAS oncogene family##AK313538|RAB3D|9545|RAB3D, member RAS oncogene family##NM_004283|RAB3D|9545|RAB3D, member RAS oncogene family	0.998046	CTCF.p2:14:0.998
chr20	30511502	30511618	reg1037223.p2	3.427	+	TSC_hg19_v1_chr20_+_30467627 BC036213 AK303963 AK302360 AK302806	-43947	+	AK093491 AX748163 NM_001008409 BC068593 BC104024 BC104025	-53028	+	BC056911 AK097430 NM_080611	-53145	-	TSC_hg19_v1_chr20_-_30539781 BC001856 AB528566	28200	-	TSC_hg19_v1_chr20_-_30539818 BC009334 AK312021	28266	-	TSC_hg19_v1_chr20_-_30539856 NM_030815 AY286301	28311	-	BC036213|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##AK303963|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##AK302360|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##AK302806|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##AK093491|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##NM_001008409|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##BC068593|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##BC104024|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##BC104025|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##BC056911|DUSP15|128853|dual specificity phosphatase 15##AK097430|C20orf57|83747|chromosome 20 open reading frame 57##NM_080611|DUSP15|128853|dual specificity phosphatase 15##BC001856|PDRG1|81572|p53 and DNA-damage regulated 1##BC009334|PDRG1|81572|p53 and DNA-damage regulated 1##AK312021|PDRG1|81572|p53 and DNA-damage regulated 1##NM_030815|PDRG1|81572|p53 and DNA-damage regulated 1##AY286301|PDRG1|81572|p53 and DNA-damage regulated 1	0.123564	
chr3	196167027	196167104	reg1037835.p2	3.427	+	TSC_hg19_v1_chr3_-_196159304 NM_015562	-7732	-	TSC_hg19_v1_chr3_-_196159299 AK026451 AK129880 AK303630 AK308699 AK307899	-7766	-	AB018337 TSC_hg19_v1_chr3_-_196159295 BC047420	-7782	-	TSC_hg19_v1_chr3_-_196230640 BC017442 BC033791 AK054732 NM_152617	63513	-	AK291522 BC118556 BC118636 AL833140 AL833443 AK123917 NM_001077657	75148	-	TSC_hg19_v1_chr3_-_196295401 BC054030 EF011620 NM_182627 AK314105	128325	-	NM_015562|UBXN7|26043|UBX domain protein 7##AK026451|UBXN7|26043|UBX domain protein 7##AK129880|UBXN7|26043|UBX domain protein 7##AK303630|UBXN7|26043|UBX domain protein 7##AK308699|UBXN7|26043|UBX domain protein 7##AK307899|UBXN7|26043|UBX domain protein 7##AB018337|UBXN7|26043|UBX domain protein 7##BC047420|UBXN7|26043|UBX domain protein 7##BC017442|RNF168|165918|ring finger protein 168##BC033791|RNF168|165918|ring finger protein 168##AK054732|RNF168|165918|ring finger protein 168##NM_152617|RNF168|165918|ring finger protein 168##AK291522|C3orf43|255798|chromosome 3 open reading frame 43##BC118556|C3orf43|255798|chromosome 3 open reading frame 43##BC118636|C3orf43|255798|chromosome 3 open reading frame 43##AL833140|C3orf43|255798|chromosome 3 open reading frame 43##AL833443|C3orf43|255798|chromosome 3 open reading frame 43##AK123917|C3orf43|255798|chromosome 3 open reading frame 43##NM_001077657|C3orf43|255798|chromosome 3 open reading frame 43##BC054030|WDR53|348793|WD repeat domain 53##EF011620|WDR53|348793|WD repeat domain 53##NM_182627|WDR53|348793|WD repeat domain 53##AK314105|WDR53|348793|WD repeat domain 53	0.0	
chr4	8202320	8202423	reg1038244.p2	3.427	+	TSC_hg19_v1_chr4_+_8201038 BC030283 AK074093 NM_018986 BC068094 AK074402 AK126165 BC131785	-1339	+	DQ413176 AJ748600 AJ748601 TSC_hg19_v1_chr4_-_8160541 BC122567 AK130044 AK094754 BC067214 NM_001130083 NM_001130084 NM_001130085 NM_001130086 NM_001130087 NM_001130088 NM_032432	-41837	-	TSC_hg19_v1_chr4_-_8129388 AK301060	-72986	-	TSC_hg19_v1_chr4_+_8271480 NM_053044 AY040094 BC034390 BC035717 AY280665 AY280666 AB528940 DQ891188 DQ894371	69204	+	TSC_hg19_v1_chr4_-_8430196 AK313242	227830	-	Y11411 BC017053 TSC_hg19_v1_chr4_-_8442447 AK225080 NM_001101667 NM_003501	240085	-	BC030283|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074093|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##NM_018986|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC068094|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074402|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK126165|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC131785|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##DQ413176|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748600|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748601|ABLIM2|84448|actin binding LIM protein family, member 2##BC122567|ABLIM2|84448|actin binding LIM protein family, member 2##AK130044|ABLIM2|84448|actin binding LIM protein family, member 2##AK094754|ABLIM2|84448|actin binding LIM protein family, member 2##BC067214|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130083|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130084|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130085|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130086|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130087|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130088|ABLIM2|84448|actin binding LIM protein family, member 2##NM_032432|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2##NM_053044|HTRA3|94031|HtrA serine peptidase 3##AY040094|HTRA3|94031|HtrA serine peptidase 3##BC034390|HTRA3|94031|HtrA serine peptidase 3##BC035717|HTRA3|94031|HtrA serine peptidase 3##AY280665|HTRA3|94031|HtrA serine peptidase 3##AY280666|HTRA3|94031|HtrA serine peptidase 3##DQ891188|HTRA3|94031|HtrA serine peptidase 3##DQ894371|HTRA3|94031|HtrA serine peptidase 3##AK313242|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##Y11411|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##BC017053|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##AK225080|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_001101667|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl##NM_003501|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl	0.0	
chr7	74188275	74188431	reg1036802.p2	3.427	+	BC002816 NM_000265 BC065731 AK127905 AK223217 AK292094 AK316341 AK316552 AB590366 CU678218 DQ893150 DQ896445 U25793	-1	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	-116231	+	TSC_hg19_v1_chr7_+_74072046 BC070484	-116309	+	AY260739 AY312853 AY336980 BC047706 BC061590 AK225845 AY336979 BC136849 BC067859 AK291431 AY336981 BC038098 NM_173537 AK098269	79486	-	TSC_hg19_v1_chr7_-_74306679 BC002581	118322	-	TSC_hg19_v1_chr7_-_74306685 AK303473 AK307228 AK309007	118330	-	BC002816|NCF1|653361|neutrophil cytosolic factor 1##NM_000265|NCF1|653361|neutrophil cytosolic factor 1##BC065731|NCF1|653361|neutrophil cytosolic factor 1##AK127905|NCF1|653361|neutrophil cytosolic factor 1##AK223217|NCF1|653361|neutrophil cytosolic factor 1##AK292094|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316341|NCF1B|654816|neutrophil cytosolic factor 1B pseudogene##AK316552|NCF1|653361|neutrophil cytosolic factor 1##DQ893150|NCF1|653361|neutrophil cytosolic factor 1##DQ896445|NCF1|653361|neutrophil cytosolic factor 1##U25793|NCF1|653361|neutrophil cytosolic factor 1##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##AY260739|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY312853|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336980|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC047706|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC061590|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK225845|GTF2IRD2|84163|GTF2I repeat domain containing 2##AY336979|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC136849|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##BC067859|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK291431|GTF2IRD2B|389524|GTF2I repeat domain containing 2B##AY336981|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC038098|GTF2IRD2|84163|GTF2I repeat domain containing 2##NM_173537|GTF2IRD2|84163|GTF2I repeat domain containing 2##AK098269|GTF2IRD2|84163|GTF2I repeat domain containing 2##BC002581|STAG3L2|442582|stromal antigen 3-like 2##AK303473|STAG3L2|442582|stromal antigen 3-like 2##AK307228|STAG3L2|442582|stromal antigen 3-like 2##AK309007|STAG3L2|442582|stromal antigen 3-like 2	0.0	
chr7	99070509	99070635	reg1045213.p1	3.427	+	TSC_hg19_v1_chr7_+_99070513 AK093141 AX747949 NM_001013258 NM_213603	-59	+	TSC_hg19_v1_chr7_+_99070512 AK309467 BC031249	-102	+	CR456891 CR542155 AF088918 TSC_hg19_v1_chr7_-_99063788 AY046911 AK223348 AK295912 BC003678 AF047436 NM_001003713 NM_001003714 NM_001039178 NM_001198879 NM_004889	-6779	-	TSC_hg19_v1_chr7_+_99070534 BC089424 BC050286 BX648360	28	+	AB527469 CU690858 EU446676 TSC_hg19_v1_chr7_-_99097899 AK222948 BC051847 NM_032164 BC017051 AJ297365 AK172865 BC062588 AY642122 BC025241	27239	-	TSC_hg19_v1_chr7_-_99097910 AK022360 AY261374	27343	-	AK093141|ZNF789|285989|zinc finger protein 789##NM_001013258|ZNF789|285989|zinc finger protein 789##NM_213603|ZNF789|285989|zinc finger protein 789##AK309467|ZNF789|285989|zinc finger protein 789##BC031249|ZNF789|285989|zinc finger protein 789##CR456891|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##CR542155|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##AF088918|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##AY046911|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##AK223348|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##AK295912|ATP5J2-PTCD1|100526740|ATP5J2-PTCD1 readthrough##BC003678|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##AF047436|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##NM_001003713|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##NM_001003714|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##NM_001039178|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##NM_001198879|ATP5J2-PTCD1|100526740|ATP5J2-PTCD1 readthrough##NM_004889|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##BC089424|ZNF789|285989|zinc finger protein 789##BC050286|ZNF789|285989|zinc finger protein 789##BX648360|ZNF789|285989|zinc finger protein 789##EU446676|ZNF394|84124|zinc finger protein 394##AK222948|ZNF394|84124|zinc finger protein 394##BC051847|ZNF394|84124|zinc finger protein 394##NM_032164|ZNF394|84124|zinc finger protein 394##BC017051|ZNF394|84124|zinc finger protein 394##AJ297365|ZNF394|84124|zinc finger protein 394##AK172865|ZNF394|84124|zinc finger protein 394##AY642122|ZNF394|84124|zinc finger protein 394##BC025241|ZNF394|84124|zinc finger protein 394##AK022360|ZNF394|84124|zinc finger protein 394	0.055155	
chr8	129063474	129063564	reg1036865.p2	3.427	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-256736	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-315029	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-315194	+	AB042405 NM_031415	1735614	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1888396	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1888487	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chrX	117359217	117359350	reg1006141.p1	3.427	+	AK302713 NM_001168301	-107981	-	AL591986 TSC_hg19_v1_chrX_-_117250764 AK316509 NM_001168302 NM_001168303	-108558	-	AK296324 NM_001168299	-239955	-	TSC_hg19_v1_chrX_+_117480068 NM_001184965 NM_001184966 NM_019045 AK127556 BX537578 AL833605 BX538087 AK299711 BC028697 BX648150	120882	+	TSC_hg19_v1_chrX_+_117480490 AM393332 AM393787 EU831942 EU832037 AK304432	121179	+	TSC_hg19_v1_chrX_+_117526665 AL834210	167404	+	AK302713|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168301|KLHL13|90293|kelch-like 13 (Drosophila)##AL591986|KLHL13|90293|kelch-like 13 (Drosophila)##AK316509|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168302|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168303|KLHL13|90293|kelch-like 13 (Drosophila)##AK296324|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001168299|KLHL13|90293|kelch-like 13 (Drosophila)##NM_001184965|WDR44|54521|WD repeat domain 44##NM_001184966|WDR44|54521|WD repeat domain 44##NM_019045|WDR44|54521|WD repeat domain 44##AK127556|WDR44|54521|WD repeat domain 44##BX537578|WDR44|54521|WD repeat domain 44##AL833605|WDR44|54521|WD repeat domain 44##BX538087|WDR44|54521|WD repeat domain 44##AK299711|WDR44|54521|WD repeat domain 44##BC028697|WDR44|54521|WD repeat domain 44##BX648150|WDR44|54521|WD repeat domain 44##AM393332|WDR44|54521|WD repeat domain 44##AM393787|WDR44|54521|WD repeat domain 44##EU831942|WDR44|54521|WD repeat domain 44##EU832037|WDR44|54521|WD repeat domain 44##AK304432|WDR44|54521|WD repeat domain 44##AL834210|WDR44|54521|WD repeat domain 44	0.0	
chr10	121459949	121460128	reg1039872.p1	3.426	+	TSC_hg19_v1_chr10_+_121411086 BC001445 AK291333 BC014656 DQ893416 DQ896772 CU675397 AB385565	-48902	+	TSC_hg19_v1_chr10_+_121411079 BC107786	-48963	+	TSC_hg19_v1_chr10_+_121411053 AL137582	-48985	+	TSC_hg19_v1_chr10_+_121485568 NM_001243195 NM_014937 AK307758	25500	+	TSC_hg19_v1_chr10_+_121485596 BC067820 AB023183	25576	+	TSC_hg19_v1_chr10_+_121485653 BC111493 BC052367 BC082755 AB385409	25667	+	AK291333|BAG3|9531|BCL2-associated athanogene 3##BC014656|BAG3|9531|BCL2-associated athanogene 3##DQ893416|BAG3|9531|BCL2-associated athanogene 3##DQ896772|BAG3|9531|BCL2-associated athanogene 3##BC107786|BAG3|9531|BCL2-associated athanogene 3##AL137582|BAG3|9531|BCL2-associated athanogene 3##NM_001243195|INPP5F|22876|inositol polyphosphate-5-phosphatase F##NM_014937|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AK307758|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC067820|INPP5F|22876|inositol polyphosphate-5-phosphatase F##AB023183|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC111493|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC052367|INPP5F|22876|inositol polyphosphate-5-phosphatase F##BC082755|INPP5F|22876|inositol polyphosphate-5-phosphatase F	0.0	
chr12	7341484	7341563	reg1019676.p2	3.426	+	TSC_hg19_v1_chr12_+_7282990 AK316059 NM_014718 AJ277460 BC111491 AK299177 BC104767 BC112283 AB527393 BC148258	-58399	+	DQ892613 DQ895853 AY007436 AF212239 NM_031491 AK311977 AK096947 AK223378 BC029355	-60093	-	BC128428 AF178985 TSC_hg19_v1_chr12_-_7261802 AK222802 BC062428 AK314299 AK024084 NM_016546	-79695	-	AK292256 NM_001131026	235	+	TSC_hg19_v1_chr12_+_7342306 Z48054 AK299105 NM_001131023 NM_001131024 NM_001131025 AK302742 AK225126 AK312317 AK316250 AK303515	831	+	BC010621 X84899 NM_000319 U19721 AB527550 DQ891142 DQ894321 CU679763	1441	+	AK316059|CLSTN3|9746|calsyntenin 3##NM_014718|CLSTN3|9746|calsyntenin 3##AJ277460|CLSTN3|9746|calsyntenin 3##BC111491|CLSTN3|9746|calsyntenin 3##AK299177|CLSTN3|9746|calsyntenin 3##BC104767|CLSTN3|9746|calsyntenin 3##BC112283|CLSTN3|9746|calsyntenin 3##BC148258|CLSTN3|9746|calsyntenin 3##DQ892613|RBP5|83758|retinol binding protein 5, cellular##DQ895853|RBP5|83758|retinol binding protein 5, cellular##AY007436|RBP5|83758|retinol binding protein 5, cellular##AF212239|RBP5|83758|retinol binding protein 5, cellular##NM_031491|RBP5|83758|retinol binding protein 5, cellular##AK311977|RBP5|83758|retinol binding protein 5, cellular##AK096947|RBP5|83758|retinol binding protein 5, cellular##AK223378|RBP5|83758|retinol binding protein 5, cellular##BC029355|RBP5|83758|retinol binding protein 5, cellular##AF178985|C1RL|51279|complement component 1, r subcomponent-like##AK222802|C1RL|51279|complement component 1, r subcomponent-like##BC062428|C1RL|51279|complement component 1, r subcomponent-like##AK314299|C1RL|51279|complement component 1, r subcomponent-like##AK024084|C1RL|51279|complement component 1, r subcomponent-like##NM_016546|C1RL|51279|complement component 1, r subcomponent-like##AK292256|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131026|PEX5|5830|peroxisomal biogenesis factor 5##Z48054|PEX5|5830|peroxisomal biogenesis factor 5##AK299105|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131023|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131024|PEX5|5830|peroxisomal biogenesis factor 5##NM_001131025|PEX5|5830|peroxisomal biogenesis factor 5##AK302742|PEX5|5830|peroxisomal biogenesis factor 5##AK225126|PEX5|5830|peroxisomal biogenesis factor 5##AK312317|PEX5|5830|peroxisomal biogenesis factor 5##AK316250|PEX5|5830|peroxisomal biogenesis factor 5##AK303515|PEX5|5830|peroxisomal biogenesis factor 5##BC010621|PEX5|5830|peroxisomal biogenesis factor 5##X84899|PEX5|5830|peroxisomal biogenesis factor 5##NM_000319|PEX5|5830|peroxisomal biogenesis factor 5##U19721|PEX5|5830|peroxisomal biogenesis factor 5##DQ891142|PEX5|5830|peroxisomal biogenesis factor 5##DQ894321|PEX5|5830|peroxisomal biogenesis factor 5	0.0	
chr13	33160222	33160339	reg1011398.p1	3.426	+	Z36834 TSC_hg19_v1_chr13_-_33112933 BC010643 U50532 AL049783 AK298546 AK312924 NM_014887 NM_033111	-47355	-	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	-157922	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	-270663	+	TSC_hg19_v1_chr13_+_33160588 NM_015032	283	+	TSC_hg19_v1_chr13_+_33160610 AL137201	338	+	TSC_hg19_v1_chr13_+_33160649 AB023196	359	+	Z36834|N4BP2L2|10443|NEDD4 binding protein 2-like 2##BC010643|N4BP2L2|10443|NEDD4 binding protein 2-like 2##U50532|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AL049783|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK298546|N4BP2L2|10443|NEDD4 binding protein 2-like 2##AK312924|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_014887|N4BP2L2|10443|NEDD4 binding protein 2-like 2##NM_033111|N4BP2L2|10443|NEDD4 binding protein 2-like 2##BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##NM_015032|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)	0.0	
chr13	80610979	80611046	reg1032246.p1	3.426	+	AB032991 BC026126 TSC_hg19_v1_chr13_+_80055538 BC021988 AK294839 AB097030 AB097031	-555457	+	TSC_hg19_v1_chr13_+_80055411 AK297197 AK001723	-555590	+	TSC_hg19_v1_chr13_+_80055257 NM_001161407 NM_019080 AB097019 AB097028 AB097029	-555741	+	BC004205 TSC_hg19_v1_chr13_-_80913114	302030	-	TSC_hg19_v1_chr13_-_80915069 AF039843 NM_005842	304052	-	TSC_hg19_v1_chr13_-_84456424 BC051738	3845413	-	AB032991|NDFIP2|54602|Nedd4 family interacting protein 2##BC026126|NDFIP2|54602|Nedd4 family interacting protein 2##BC021988|NDFIP2|54602|Nedd4 family interacting protein 2##AK294839|NDFIP2|54602|Nedd4 family interacting protein 2##AB097030|NDFIP2|54602|Nedd4 family interacting protein 2##AB097031|NDFIP2|54602|Nedd4 family interacting protein 2##AK297197|NDFIP2|54602|Nedd4 family interacting protein 2##AK001723|NDFIP2|54602|Nedd4 family interacting protein 2##NM_001161407|NDFIP2|54602|Nedd4 family interacting protein 2##NM_019080|NDFIP2|54602|Nedd4 family interacting protein 2##AB097019|NDFIP2|54602|Nedd4 family interacting protein 2##AB097028|NDFIP2|54602|Nedd4 family interacting protein 2##AB097029|NDFIP2|54602|Nedd4 family interacting protein 2##BC004205|SPRY2|10253|sprouty homolog 2 (Drosophila)##AF039843|SPRY2|10253|sprouty homolog 2 (Drosophila)##NM_005842|SPRY2|10253|sprouty homolog 2 (Drosophila)##BC051738|SLITRK1|114798|SLIT and NTRK-like family, member 1	0.0	
chr14	74036952	74037052	reg1046262.p1	3.426	+	TSC_hg19_v1_chr14_+_74035979 DQ893488 DQ896406 BC004436 BC006500 L40401 AY005822 CU678722	-1005	+	AK001939 DQ082755 AK223635 NM_006821 BC006335 TSC_hg19_v1_chr14_+_74035788	-1227	+	AK093515 AX748177 BC047590 NM_001220484 NM_203309	-11356	-	BC090945 NM_152331	21407	+	DQ082756 NM_001037162	46545	+	NM_001201366 NM_031427 AF542071 BC005343 AL833654 AK315392	74651	+	DQ893488|ACOT2|10965|acyl-CoA thioesterase 2##DQ896406|ACOT2|10965|acyl-CoA thioesterase 2##BC004436|ACOT2|10965|acyl-CoA thioesterase 2##BC006500|ACOT2|10965|acyl-CoA thioesterase 2##L40401|ACOT2|10965|acyl-CoA thioesterase 2##AY005822|ACOT2|10965|acyl-CoA thioesterase 2##AK001939|ACOT2|10965|acyl-CoA thioesterase 2##DQ082755|ACOT2|10965|acyl-CoA thioesterase 2##AK223635|ACOT2|10965|acyl-CoA thioesterase 2##NM_006821|ACOT2|10965|acyl-CoA thioesterase 2##BC006335|ACOT2|10965|acyl-CoA thioesterase 2##AK093515|HEATR4|399671|HEAT repeat containing 4##BC047590|HEATR4|399671|HEAT repeat containing 4##NM_001220484|HEATR4|399671|HEAT repeat containing 4##NM_203309|HEATR4|399671|HEAT repeat containing 4##BC090945|ACOT4|122970|acyl-CoA thioesterase 4##NM_152331|ACOT4|122970|acyl-CoA thioesterase 4##DQ082756|ACOT6|641372|acyl-CoA thioesterase 6##NM_001037162|ACOT6|641372|acyl-CoA thioesterase 6##NM_001201366|DNAL1|83544|dynein, axonemal, light chain 1##NM_031427|DNAL1|83544|dynein, axonemal, light chain 1##AF542071|DNAL1|83544|dynein, axonemal, light chain 1##BC005343|DNAL1|83544|dynein, axonemal, light chain 1##AL833654|DNAL1|83544|dynein, axonemal, light chain 1##AK315392|DNAL1|83544|dynein, axonemal, light chain 1	0.0	
chr1	53776055	53776152	reg1032397.p1	3.426	+	DQ891289 DQ894473 AB528424 TSC_hg19_v1_chr1_-_53704191 AF035940 BC018211 AK297895 AF067173 AK312113 NM_002370	-71902	-	TSC_hg19_v1_chr1_-_53686277 AK000587 BC010908 NM_017887	-89829	-	TSC_hg19_v1_chr1_+_53662495 BC002445 BC005172 AK312687 M58581	-113607	+	Z75190 D50678 BC051836 TSC_hg19_v1_chr1_-_53793738	17559	-	TSC_hg19_v1_chr1_-_53793743 NM_001018054 NM_004631 NM_017522 NM_033300	17678	-	AK057273 NM_033067 AJ291671	149004	+	DQ891289|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##DQ894473|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF035940|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##BC018211|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK297895|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AF067173|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK312113|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##NM_002370|MAGOH|4116|mago-nashi homolog, proliferation-associated (Drosophila)##AK000587|C1orf123|54987|chromosome 1 open reading frame 123##BC010908|C1orf123|54987|chromosome 1 open reading frame 123##NM_017887|C1orf123|54987|chromosome 1 open reading frame 123##BC002445|CPT2|1376|carnitine palmitoyltransferase 2##BC005172|CPT2|1376|carnitine palmitoyltransferase 2##AK312687|CPT2|1376|carnitine palmitoyltransferase 2##M58581|CPT2|1376|carnitine palmitoyltransferase 2##Z75190|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##D50678|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##BC051836|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1	0.0	
chr16	85937330	85937464	reg1032598.p1	3.426	+	TSC_hg19_v1_chr16_+_85932767 NM_002163 BC126247 M91196	-4611	+	TSC_hg19_v1_chr16_+_85833325 BC021236 M21575	-104062	+	BC062437 X54802 TSC_hg19_v1_chr16_+_85833300 AK311847 BC039013 BC008704	-104092	+	TSC_hg19_v1_chr16_-_86542463 AK091834	605067	-	TSC_hg19_v1_chr16_+_86544132 AK314167 NM_001451 BC089442 U13219	606759	+	TSC_hg19_v1_chr16_+_86544238 AB464530 EU832158 EU832252	606843	+	NM_002163|IRF8|3394|interferon regulatory factor 8##BC126247|IRF8|3394|interferon regulatory factor 8##M91196|IRF8|3394|interferon regulatory factor 8##BC021236|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##M21575|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC062437|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##X54802|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK311847|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC039013|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##BC008704|COX4I1|1327|cytochrome c oxidase subunit IV isoform 1##AK091834|LOC400550|400550|uncharacterized LOC400550##AK314167|FOXF1|2294|forkhead box F1##NM_001451|FOXF1|2294|forkhead box F1##BC089442|FOXF1|2294|forkhead box F1##U13219|FOXF1|2294|forkhead box F1##EU832158|FOXF1|2294|forkhead box F1##EU832252|FOXF1|2294|forkhead box F1	0.0	
chr16	89767958	89768085	reg1038756.p1	3.426	+	TSC_hg19_v1_chr16_+_89753098 AB209829 BC017342 AK292351 BC093028 AK296631 AK290485 AF153430 AK312016 BC025301 BC032704	-14912	+	TSC_hg19_v1_chr16_+_89753087 AK298386 NM_001098533 NM_001160367 NM_052987 NM_052988 AK075036 L33264 AK295397	-14942	+	TSC_hg19_v1_chr16_+_89724475 AK125673	-43551	+	TSC_hg19_v1_chr16_-_89768114 BC039608 BC053588 BC027606 NM_152339	98	-	TSC_hg19_v1_chr16_+_89778259 AK096286	10242	+	TSC_hg19_v1_chr16_-_89787328 AB527115 NM_004913	19306	-	AB209829|CDK10|8558|cyclin-dependent kinase 10##BC017342|CDK10|8558|cyclin-dependent kinase 10##AK292351|CDK10|8558|cyclin-dependent kinase 10##BC093028|CDK10|8558|cyclin-dependent kinase 10##AK296631|CDK10|8558|cyclin-dependent kinase 10##AK290485|CDK10|8558|cyclin-dependent kinase 10##AF153430|CDK10|8558|cyclin-dependent kinase 10##AK312016|CDK10|8558|cyclin-dependent kinase 10##BC025301|CDK10|8558|cyclin-dependent kinase 10##BC032704|CDK10|8558|cyclin-dependent kinase 10##AK298386|CDK10|8558|cyclin-dependent kinase 10##NM_001098533|CDK10|8558|cyclin-dependent kinase 10##NM_001160367|CDK10|8558|cyclin-dependent kinase 10##NM_052987|CDK10|8558|cyclin-dependent kinase 10##NM_052988|CDK10|8558|cyclin-dependent kinase 10##AK075036|CDK10|8558|cyclin-dependent kinase 10##L33264|CDK10|8558|cyclin-dependent kinase 10##AK295397|CDK10|8558|cyclin-dependent kinase 10##AK125673|C16orf55|124045|chromosome 16 open reading frame 55##BC039608|SPATA2L|124044|spermatogenesis associated 2-like##BC053588|SPATA2L|124044|spermatogenesis associated 2-like##BC027606|SPATA2L|124044|spermatogenesis associated 2-like##NM_152339|SPATA2L|124044|spermatogenesis associated 2-like##AK096286|LOC100128881|100128881|uncharacterized LOC100128881##NM_004913|C16orf7|9605|chromosome 16 open reading frame 7	0.745705	CTCF.p2:-20:0.746
chr17	18224803	18224896	reg1037014.p1	3.426	+	TSC_hg19_v1_chr17_+_18218610 BC142680 AF467440 BC001018 BC005067 BC014179 BC101115 BC101116 BC101117	-6186	+	TSC_hg19_v1_chr17_+_18218606 AK296847	-6243	+	TSC_hg19_v1_chr17_+_18218603 NM_144775	-6263	+	TSC_hg19_v1_chr17_-_18266810 BC007979 BC022874 BC038598 AK223552 AK298415 AK302834 AF017065 NM_004169 NM_148918	41935	-	BC036791 NM_001145127 AK298286 BC026998	56238	+	AK296659 NM_001040078 AK315818 BC073889 BC105943 TSC_hg19_v1_chr17_+_18380141 CU687266	155283	+	BC142680|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##AF467440|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC001018|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC005067|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC014179|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC101115|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC101116|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC101117|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##AK296847|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##NM_144775|SMCR8|140775|Smith-Magenis syndrome chromosome region, candidate 8##BC007979|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC022874|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC038598|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK223552|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK298415|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK302834|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AF017065|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_004169|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_148918|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC036791|EVPLL|645027|envoplakin-like##NM_001145127|EVPLL|645027|envoplakin-like##AK298286|EVPLL|645027|envoplakin-like##BC026998|EVPLL|645027|envoplakin-like##AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001040078|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##AK315818|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC073889|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B	0.0	
chr17	43107503	43107616	reg1031449.p2	3.426	+	TSC_hg19_v1_chr17_-_43045715 BC008798 NM_006688	-61861	-	TSC_hg19_v1_chr17_-_43025057 NM_001080443	-82497	-	BC062609 AB463686 J04569 BC013596 AF419299 BC041765 AK128790 TSC_hg19_v1_chr17_-_42992869 AK098380 AK098758 AK222683 AK295734 AK296259 AK303728 S40719 AK315398 NM_001131019 NM_001242376 NM_002055	-114674	-	TSC_hg19_v1_chr17_-_43128979 AK290755 NM_001128631 AK026608	21370	-	TSC_hg19_v1_chr17_-_43138397 BC006472 BC006546 NM_024819	30853	-	TSC_hg19_v1_chr17_+_43138673 Y17208 Y17209	31098	+	BC008798|C1QL1|10882|complement component 1, q subcomponent-like 1##NM_006688|C1QL1|10882|complement component 1, q subcomponent-like 1##NM_001080443|KIF18B|146909|kinesin family member 18B##BC062609|GFAP|2670|glial fibrillary acidic protein##J04569|GFAP|2670|glial fibrillary acidic protein##BC013596|GFAP|2670|glial fibrillary acidic protein##AF419299|GFAP|2670|glial fibrillary acidic protein##BC041765|GFAP|2670|glial fibrillary acidic protein##AK128790|GFAP|2670|glial fibrillary acidic protein##AK098380|GFAP|2670|glial fibrillary acidic protein##AK098758|GFAP|2670|glial fibrillary acidic protein##AK222683|GFAP|2670|glial fibrillary acidic protein##AK295734|GFAP|2670|glial fibrillary acidic protein##AK296259|GFAP|2670|glial fibrillary acidic protein##AK303728|GFAP|2670|glial fibrillary acidic protein##S40719|GFAP|2670|glial fibrillary acidic protein##AK315398|GFAP|2670|glial fibrillary acidic protein##NM_001131019|GFAP|2670|glial fibrillary acidic protein##NM_001242376|GFAP|2670|glial fibrillary acidic protein##NM_002055|GFAP|2670|glial fibrillary acidic protein##AK290755|DCAKD|79877|dephospho-CoA kinase domain containing##NM_001128631|DCAKD|79877|dephospho-CoA kinase domain containing##AK026608|DCAKD|79877|dephospho-CoA kinase domain containing##BC006472|DCAKD|79877|dephospho-CoA kinase domain containing##BC006546|DCAKD|79877|dephospho-CoA kinase domain containing##NM_024819|DCAKD|79877|dephospho-CoA kinase domain containing##Y17208|NMT1|4836|N-myristoyltransferase 1##Y17209|NMT1|4836|N-myristoyltransferase 1	0.0	
chr1	75669330	75669451	reg1006695.p1	3.426	+	NM_001001933 BC040321	-75271	+	NM_001130042 NM_001130043 NM_001134759 NM_001889	-470299	-	NM_001162916 AK098237 BC071765 NM_138467 AK294264 AK299849 BC009514 AK311272 AB590606	-470510	+	AK128063 BC028743 BC034580 BC051740 NM_001130058 NM_152697 AK093170 AX747970	407391	-	AK299573 TSC_hg19_v1_chr1_-_76081791	412356	-	NM_000016 NM_001127328 TSC_hg19_v1_chr1_+_76190106	520684	+	NM_001001933|LHX8|431707|LIM homeobox 8##BC040321|LHX8|431707|LIM homeobox 8##NM_001130042|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001130043|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001134759|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001889|CRYZ|1429|crystallin, zeta (quinone reductase)##NM_001162916|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK098237|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC071765|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##NM_138467|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK294264|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK299849|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##BC009514|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK311272|TYW3|127253|tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)##AK128063|SLC44A5|204962|solute carrier family 44, member 5##BC028743|SLC44A5|204962|solute carrier family 44, member 5##BC034580|SLC44A5|204962|solute carrier family 44, member 5##BC051740|SLC44A5|204962|solute carrier family 44, member 5##NM_001130058|SLC44A5|204962|solute carrier family 44, member 5##NM_152697|SLC44A5|204962|solute carrier family 44, member 5##AK093170|SLC44A5|204962|solute carrier family 44, member 5##AK299573|SLC44A5|204962|solute carrier family 44, member 5##NM_000016|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain##NM_001127328|ACADM|34|acyl-CoA dehydrogenase, C-4 to C-12 straight chain	0.015543	
chr18	36007366	36007495	reg1038411.p2	3.426	+	NM_001025087 NM_001025088 NM_001025089 NM_020180	-861431	-	AF329265 AK295009 BC045711 TSC_hg19_v1_chr18_-_35145684 AK074596 AF248650 BC001946 BC004167 AB209774	-861734	-	TSC_hg19_v1_chr18_-_34409124 BC087845 NM_015476	-1598310	-	TSC_hg19_v1_chr18_-_36915657 D28405	908226	-	TSC_hg19_v1_chr18_-_37380279 AK090603	1372838	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	3527769	+	NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##AF329265|CELF4|56853|CUGBP, Elav-like family member 4##AK295009|CELF4|56853|CUGBP, Elav-like family member 4##BC045711|CELF4|56853|CUGBP, Elav-like family member 4##AK074596|CELF4|56853|CUGBP, Elav-like family member 4##AF248650|CELF4|56853|CUGBP, Elav-like family member 4##BC001946|CELF4|56853|CUGBP, Elav-like family member 4##BC004167|CELF4|56853|CUGBP, Elav-like family member 4##AB209774|CELF4|56853|CUGBP, Elav-like family member 4##BC087845|TPGS2|25941|tubulin polyglutamylase complex subunit 2##NM_015476|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK090603|LOC647946|647946|uncharacterized LOC647946##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3	0.511437	CTCF.p2:-1:0.511
chr19	47917879	47917969	reg1047049.p2	3.426	+	NM_014681 TSC_hg19_v1_chr19_+_47852571 AK304710	-65355	+	AB038237 NM_018485	-77554	+	BC008982 NM_001736 TSC_hg19_v1_chr19_+_47813117 M62505	-104822	+	AB463870 AK289950 TSC_hg19_v1_chr19_-_47922380	4436	-	TSC_hg19_v1_chr19_-_47922396 BC069251	4474	-	TSC_hg19_v1_chr19_-_47922468 BC025404	4582	-	NM_014681|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34##AK304710|DHX34|9704|DEAH (Asp-Glu-Ala-His) box polypeptide 34##AB038237|GPR77|27202|G protein-coupled receptor 77##NM_018485|GPR77|27202|G protein-coupled receptor 77##BC008982|C5AR1|728|complement component 5a receptor 1##NM_001736|C5AR1|728|complement component 5a receptor 1##M62505|C5AR1|728|complement component 5a receptor 1##AK289950|MEIS3|56917|Meis homeobox 3##BC069251|MEIS3|56917|Meis homeobox 3##BC025404|MEIS3|56917|Meis homeobox 3	0.0	
chr3	108943358	108943459	reg1042641.p1	3.426	+	AK026416 TSC_hg19_v1_chr3_+_108855566	-87845	+	CU690636 BC050307 AK302642 AF084946 BC028680 NM_014429	-106458	-	AF110003 EU832759 GQ129299 AF110002 BC103993 BC103994 AB593147 NM_005459	-270797	-	BC018070 AY283672 NM_138815	91893	-	DQ891225 DQ894410 AK001575 AK299290 AB528636 AK298623 TSC_hg19_v1_chr3_-_109056370 AK022698	112945	-	TSC_hg19_v1_chr3_-_109056388 BC032846 AK290992 NM_018189	112995	-	AK026416|FLJ22763|401081|uncharacterized LOC401081##BC050307|MORC1|27136|MORC family CW-type zinc finger 1##AK302642|MORC1|27136|MORC family CW-type zinc finger 1##AF084946|MORC1|27136|MORC family CW-type zinc finger 1##BC028680|MORC1|27136|MORC family CW-type zinc finger 1##NM_014429|MORC1|27136|MORC family CW-type zinc finger 1##AF110003|GUCA1C|9626|guanylate cyclase activator 1C##EU832759|GUCA1C|9626|guanylate cyclase activator 1C##GQ129299|GUCA1C|9626|guanylate cyclase activator 1C##AF110002|GUCA1C|9626|guanylate cyclase activator 1C##BC103993|GUCA1C|9626|guanylate cyclase activator 1C##BC103994|GUCA1C|9626|guanylate cyclase activator 1C##AB593147|GUCA1C|9626|guanylate cyclase activator 1C##NM_005459|GUCA1C|9626|guanylate cyclase activator 1C##BC018070|DPPA2|151871|developmental pluripotency associated 2##AY283672|DPPA2|151871|developmental pluripotency associated 2##NM_138815|DPPA2|151871|developmental pluripotency associated 2##DQ891225|DPPA4|55211|developmental pluripotency associated 4##DQ894410|DPPA4|55211|developmental pluripotency associated 4##AK001575|DPPA4|55211|developmental pluripotency associated 4##AK299290|DPPA4|55211|developmental pluripotency associated 4##AK298623|DPPA4|55211|developmental pluripotency associated 4##AK022698|DPPA4|55211|developmental pluripotency associated 4##BC032846|DPPA4|55211|developmental pluripotency associated 4##AK290992|DPPA4|55211|developmental pluripotency associated 4##NM_018189|DPPA4|55211|developmental pluripotency associated 4	1.010407	CTCF.p2:5:1.000
chr3	13109925	13110012	reg1043738.p1	3.426	+	TSC_hg19_v1_chr3_-_13057189 BC071805	-52750	-	AY653734 NM_014869 TSC_hg19_v1_chr3_-_13009192	-100860	-	TSC_hg19_v1_chr3_-_12941548 BC008088 AF055004	-168360	-	TSC_hg19_v1_chr3_-_13114618 AK294525 NM_001134382	4630	-	AB020713 TSC_hg19_v1_chr3_-_13384784	274797	-	AB384541 TSC_hg19_v1_chr3_-_13461731 BC067089	351764	-	AY653734|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_014869|IQSEC1|9922|IQ motif and Sec7 domain 1##BC008088|IQSEC1|9922|IQ motif and Sec7 domain 1##AF055004|IQSEC1|9922|IQ motif and Sec7 domain 1##AK294525|IQSEC1|9922|IQ motif and Sec7 domain 1##NM_001134382|IQSEC1|9922|IQ motif and Sec7 domain 1##AB020713|NUP210|23225|nucleoporin 210kDa##BC067089|NUP210|23225|nucleoporin 210kDa	0.0	
chr4	47974394	47974465	reg1037875.p2	3.426	+	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	-57834	-	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	-134339	-	TSC_hg19_v1_chr4_+_47708352 D28417	-266075	+	M84741 NM_001142564 S42457	9060	-	AK292021 NM_000087	40531	-	X64802 TSC_hg19_v1_chr4_-_48018662	44208	-	AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1##S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1##AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1	0.0	
chr4	71705435	71705560	reg1038113.p1	3.426	+	AK094806 NM_001098477	-294	-	TSC_hg19_v1_chr4_+_71587713 NM_001037442 NM_014961 BC051716 BC053837 BC098433 AB020678 BC071988	-117777	+	BC030809 TSC_hg19_v1_chr4_-_71571018	-134499	-	TSC_hg19_v1_chr4_-_71705608 U07231 AK127161 AK090755 AK055499 AK056891 AK095799 AK097055 AK124124 BC040485	80	-	TSC_hg19_v1_chr4_-_71705615 NM_002092 AK296287	140	-	NM_001244766 NM_001244767 NM_173468 AK093545 AX748194 TSC_hg19_v1_chr4_+_71768085 AK299481 BC038112 AK313513	62616	+	AK094806|GRSF1|2926|G-rich RNA sequence binding factor 1##NM_001098477|GRSF1|2926|G-rich RNA sequence binding factor 1##NM_001037442|RUFY3|22902|RUN and FYVE domain containing 3##NM_014961|RUFY3|22902|RUN and FYVE domain containing 3##BC051716|RUFY3|22902|RUN and FYVE domain containing 3##BC053837|RUFY3|22902|RUN and FYVE domain containing 3##BC098433|RUFY3|22902|RUN and FYVE domain containing 3##AB020678|RUFY3|22902|RUN and FYVE domain containing 3##BC071988|RUFY3|22902|RUN and FYVE domain containing 3##BC030809|LOC641510|641510|uncharacterized LOC641510##U07231|GRSF1|2926|G-rich RNA sequence binding factor 1##AK127161|GRSF1|2926|G-rich RNA sequence binding factor 1##AK090755|GRSF1|2926|G-rich RNA sequence binding factor 1##AK055499|GRSF1|2926|G-rich RNA sequence binding factor 1##AK056891|GRSF1|2926|G-rich RNA sequence binding factor 1##AK095799|GRSF1|2926|G-rich RNA sequence binding factor 1##AK097055|GRSF1|2926|G-rich RNA sequence binding factor 1##AK124124|GRSF1|2926|G-rich RNA sequence binding factor 1##BC040485|GRSF1|2926|G-rich RNA sequence binding factor 1##NM_002092|GRSF1|2926|G-rich RNA sequence binding factor 1##AK296287|GRSF1|2926|G-rich RNA sequence binding factor 1##NM_001244766|MOB1B|92597|MOB kinase activator 1B##NM_001244767|MOB1B|92597|MOB kinase activator 1B##NM_173468|MOB1B|92597|MOB kinase activator 1B##AK093545|MOB1B|92597|MOB kinase activator 1B##AK299481|MOB1B|92597|MOB kinase activator 1B##BC038112|MOB1B|92597|MOB kinase activator 1B##AK313513|MOB1B|92597|MOB kinase activator 1B	0.0	
chr5	114709892	114710025	reg1044196.p2	3.426	+	AB587510 AJ580807 NM_001040440	-77610	-	BC031242 AK307327 NM_152549	-77983	-	AY780790 AB590094 TSC_hg19_v1_chr5_-_114598563 NM_005023	-111392	-	TSC_hg19_v1_chr5_-_114880370 AL365415 AK315803 BC098385	170399	-	TSC_hg19_v1_chr5_-_114880540 BC028369 NM_020177	170605	-	BC109265 BC109266 NM_021649	228159	-	AJ580807|CCDC112|153733|coiled-coil domain containing 112##NM_001040440|CCDC112|153733|coiled-coil domain containing 112##BC031242|CCDC112|153733|coiled-coil domain containing 112##NM_152549|CCDC112|153733|coiled-coil domain containing 112##AY780790|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##NM_005023|PGGT1B|5229|protein geranylgeranyltransferase type I, beta subunit##AL365415|FEM1C|56929|fem-1 homolog c (C. elegans)##AK315803|FEM1C|56929|fem-1 homolog c (C. elegans)##BC098385|FEM1C|56929|fem-1 homolog c (C. elegans)##BC028369|FEM1C|56929|fem-1 homolog c (C. elegans)##NM_020177|FEM1C|56929|fem-1 homolog c (C. elegans)##BC109265|TICAM2|353376|toll-like receptor adaptor molecule 2##BC109266|TICAM2|353376|toll-like receptor adaptor molecule 2##NM_021649|TICAM2|353376|toll-like receptor adaptor molecule 2	0.415663	CTCF.p2:-10:0.416
chr6	33538938	33539119	reg1042227.p2	3.426	+	TSC_hg19_v1_chr6_+_33422352 AK313571 AK122644 NM_152735 BC014978	-116656	+	AK094225 NM_006772 AB067525 AK307888 AB385518	-151085	+	NM_001014433 NM_001014837 NM_001014838 NM_001014840 NM_015921 TSC_hg19_v1_chr6_-_33386080	-152948	-	U23765 U16811 TSC_hg19_v1_chr6_-_33547998 X84213 BC004431 BC032789 BC110337 AK091807 AK292093	8887	-	TSC_hg19_v1_chr6_-_33548037 AK303422 AK293547 NM_001188	9015	-	TSC_hg19_v1_chr6_+_33589123 D26351 NM_002224 BC146646 U01062	50166	+	AK313571|ZBTB9|221504|zinc finger and BTB domain containing 9##AK122644|ZBTB9|221504|zinc finger and BTB domain containing 9##NM_152735|ZBTB9|221504|zinc finger and BTB domain containing 9##BC014978|ZBTB9|221504|zinc finger and BTB domain containing 9##AK094225|SYNGAP1|8831|synaptic Ras GTPase activating protein 1##NM_006772|SYNGAP1|8831|synaptic Ras GTPase activating protein 1##AK307888|SYNGAP1|8831|synaptic Ras GTPase activating protein 1##NM_001014433|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)##NM_001014837|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)##NM_001014838|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)##NM_001014840|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)##NM_015921|CUTA|51596|cutA divalent cation tolerance homolog (E. coli)##U23765|BAK1|578|BCL2-antagonist/killer 1##U16811|BAK1|578|BCL2-antagonist/killer 1##X84213|BAK1|578|BCL2-antagonist/killer 1##BC004431|BAK1|578|BCL2-antagonist/killer 1##BC032789|BAK1|578|BCL2-antagonist/killer 1##BC110337|BAK1|578|BCL2-antagonist/killer 1##AK091807|BAK1|578|BCL2-antagonist/killer 1##AK292093|BAK1|578|BCL2-antagonist/killer 1##AK303422|BAK1|578|BCL2-antagonist/killer 1##AK293547|BAK1|578|BCL2-antagonist/killer 1##NM_001188|BAK1|578|BCL2-antagonist/killer 1##D26351|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##NM_002224|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##BC146646|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3##U01062|ITPR3|3710|inositol 1,4,5-trisphosphate receptor, type 3	0.012865	
chr7	74001880	74001963	reg1026047.p1	3.426	+	TSC_hg19_v1_chr7_+_73868413 AF156489 AF118270 AF104923	-133486	+	TSC_hg19_v1_chr7_+_73868257 AY648295 BC018136	-133613	+	TSC_hg19_v1_chr7_+_73868185 AF151354 NM_001199207 NM_005685 NM_016328	-133757	+	AK292832 TSC_hg19_v1_chr7_+_74072028 AF015553 NM_001163636 NM_001518 NM_032999 NM_033000 NM_033001	70100	+	TSC_hg19_v1_chr7_+_74072046 BC070484	70123	+	TSC_hg19_v1_chr7_+_74072057 BC099907 AK294935 AF035737 AF038967 AF038968 AF038969	70201	+	AF156489|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF118270|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF104923|GTF2IRD1|9569|GTF2I repeat domain containing 1##AY648295|GTF2IRD1|9569|GTF2I repeat domain containing 1##BC018136|GTF2IRD1|9569|GTF2I repeat domain containing 1##AF151354|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_001199207|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_005685|GTF2IRD1|9569|GTF2I repeat domain containing 1##NM_016328|GTF2IRD1|9569|GTF2I repeat domain containing 1##AK292832|GTF2I|2969|general transcription factor IIi##AF015553|GTF2I|2969|general transcription factor IIi##NM_001163636|GTF2I|2969|general transcription factor IIi##NM_001518|GTF2I|2969|general transcription factor IIi##NM_032999|GTF2I|2969|general transcription factor IIi##NM_033000|GTF2I|2969|general transcription factor IIi##NM_033001|GTF2I|2969|general transcription factor IIi##BC070484|GTF2I|2969|general transcription factor IIi##BC099907|GTF2I|2969|general transcription factor IIi##AK294935|GTF2I|2969|general transcription factor IIi##AF035737|GTF2I|2969|general transcription factor IIi##AF038967|GTF2I|2969|general transcription factor IIi##AF038968|GTF2I|2969|general transcription factor IIi##AF038969|GTF2I|2969|general transcription factor IIi	0.0	
chr8	128563051	128563132	reg1034847.p2	3.426	+	DQ486513 NM_001159542	-135235	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-992367	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-992536	-	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	185234	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	185399	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	243692	+	DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)	0.0	
chr1	206971577	206971701	reg1039391.p2	3.425	+	AF043333 AY029171 CR541993 CR542028 AB587432 M57627 BC104252 BC104253 BC022315 NM_000572 EU751618 EU751619	-25760	-	TSC_hg19_v1_chr1_+_206858308 BC036060 NM_004759 NM_032960 BC052584 AB590627 X75346	-113168	+	AB529015 BC037269 AF327561 TSC_hg19_v1_chr1_+_206809124 AF186774	-162529	+	AY040367 NM_153758 AB463800	587	+	AF453946 NM_013371	30582	+	AF224266 NM_018724 BC117386 BC117390 BC074948 BC074949 AB590628 AY876922 BC069311 BC069364 BC069398 BC069425 BC069449 BC069487 BC069523 BC069559 CU686884 HQ258739	67536	+	AF043333|IL10|3586|interleukin 10##AY029171|IL10|3586|interleukin 10##CR541993|IL10|3586|interleukin 10##CR542028|IL10|3586|interleukin 10##M57627|IL10|3586|interleukin 10##BC104252|IL10|3586|interleukin 10##BC104253|IL10|3586|interleukin 10##BC022315|IL10|3586|interleukin 10##NM_000572|IL10|3586|interleukin 10##BC036060|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_004759|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##NM_032960|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC052584|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##X75346|MAPKAPK2|9261|mitogen-activated protein kinase-activated protein kinase 2##BC037269|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF327561|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AF186774|DYRK3|8444|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3##AY040367|IL19|29949|interleukin 19##NM_153758|IL19|29949|interleukin 19##AF453946|IL19|29949|interleukin 19##NM_013371|IL19|29949|interleukin 19##AF224266|IL20|50604|interleukin 20##NM_018724|IL20|50604|interleukin 20##BC117386|IL20|50604|interleukin 20##BC117390|IL20|50604|interleukin 20##BC074948|IL20|50604|interleukin 20##BC074949|IL20|50604|interleukin 20##AY876922|IL20|50604|interleukin 20##BC069311|IL20|50604|interleukin 20##BC069364|IL20|50604|interleukin 20##BC069398|IL20|50604|interleukin 20##BC069425|IL20|50604|interleukin 20##BC069449|IL20|50604|interleukin 20##BC069487|IL20|50604|interleukin 20##BC069523|IL20|50604|interleukin 20##BC069559|IL20|50604|interleukin 20##HQ258739|IL20|50604|interleukin 20	0.149288	
chr14	67826808	67826950	reg1037482.p1	3.425	+	CU692980 TSC_hg19_v1_chr14_-_67826522 BC001411 AF104629 BC031002 AK315784 AK001155 AF145316 AF077614 AF100741 BC025373 NM_015994	-313	-	BC095485 TSC_hg19_v1_chr14_+_67708117 NM_022474 AK291240 AK098373 BC053366 AL832326 BC129933 AL832578 BC037966 AK057160	-118716	+	NM_173526 AK093449 AX748134 AK302154 BC037380 BC050401	-170736	+	TSC_hg19_v1_chr14_+_67827035 NM_004094	154	+	TSC_hg19_v1_chr14_+_67827053 AK312442 BX161521 AK297244	171	+	TSC_hg19_v1_chr14_+_67827069 D28379	185	+	BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC095485|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##NM_022474|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK291240|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK098373|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC053366|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832326|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC129933|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832578|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC037966|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##NM_173526|FAM71D|161142|family with sequence similarity 71, member D##AK093449|FAM71D|161142|family with sequence similarity 71, member D##AK302154|FAM71D|161142|family with sequence similarity 71, member D##BC037380|FAM71D|161142|family with sequence similarity 71, member D##BC050401|FAM71D|161142|family with sequence similarity 71, member D##NM_004094|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##AK312442|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##BX161521|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##AK297244|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa##D28379|EIF2S1|1965|eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa	0.238552	CTCF.p2:-72:0.239
chr15	77227918	77228097	reg1034645.p1	3.425	+	TSC_hg19_v1_chr15_+_77224095 NM_002902 AK313833 X78669 BC004892 BT009790 CU678788	-3935	+	AB040887 TSC_hg19_v1_chr15_-_77197781 AK056095	-30236	-	TSC_hg19_v1_chr15_-_77197682 BC070197 BC107415 AK056515	-30343	-	TSC_hg19_v1_chr15_+_77287465 AK309856 NM_003978 AK310126 BC008602	59483	+	AK304052 U94778 AK316220 TSC_hg19_v1_chr15_+_77287720 AK298733	59699	+	TSC_hg19_v1_chr15_+_77287743 AK310072 AB451310 AB451440 AF038602 AF038603 DQ891779 DQ894963 AB528365	59820	+	NM_002902|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##AK313833|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##X78669|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##BC004892|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##BT009790|RCN2|5955|reticulocalbin 2, EF-hand calcium binding domain##AB040887|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056095|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC070197|SCAPER|49855|S-phase cyclin A-associated protein in the ER##BC107415|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK056515|SCAPER|49855|S-phase cyclin A-associated protein in the ER##AK309856|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##NM_003978|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310126|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##BC008602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK304052|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##U94778|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK316220|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK298733|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AK310072|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451310|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AB451440|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038602|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##AF038603|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ891779|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1##DQ894963|PSTPIP1|9051|proline-serine-threonine phosphatase interacting protein 1	0.0	
chr17	71088679	71088805	reg1028241.p1	3.425	+	AK000477 TSC_hg19_v1_chr17_-_70588944	-499799	-	TSC_hg19_v1_chr17_+_70117187 BC007951	-971502	+	TSC_hg19_v1_chr17_+_70117168 BC056420 Z46629	-971572	+	AF331643 TSC_hg19_v1_chr17_-_71088816	74	-	TSC_hg19_v1_chr17_-_71088824 AK313376 AK095227	81	-	BC035631 TSC_hg19_v1_chr17_-_71088831	89	-	AK000477|LOC100499467|100499467|uncharacterized LOC100499467##BC007951|SOX9|6662|SRY (sex determining region Y)-box 9##BC056420|SOX9|6662|SRY (sex determining region Y)-box 9##Z46629|SOX9|6662|SRY (sex determining region Y)-box 9##AF331643|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK313376|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##AK095227|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11##BC035631|SLC39A11|201266|solute carrier family 39 (metal ion transporter), member 11	0.026861	
chr22	25231322	25231414	reg1035692.p1	3.425	+	NM_001039948 NM_001098497 NM_001098498 NM_133454 AB275761 AK091494 BC036915	-29158	+	AB079368 NM_001008496 AK302409 AK315806	-60684	-	TSC_hg19_v1_chr22_+_25003637 NM_001032365	-227745	+	BC130647 BC130649 CR456388 NM_001001663	103944	-	BC171801 NM_001145206	192572	+	TSC_hg19_v1_chr22_+_25591072 AK025418	359761	+	NM_001039948|SGSM1|129049|small G protein signaling modulator 1##NM_001098497|SGSM1|129049|small G protein signaling modulator 1##NM_001098498|SGSM1|129049|small G protein signaling modulator 1##NM_133454|SGSM1|129049|small G protein signaling modulator 1##AB275761|SGSM1|129049|small G protein signaling modulator 1##BC036915|SGSM1|129049|small G protein signaling modulator 1##AB079368|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001008496|PIWIL3|440822|piwi-like 3 (Drosophila)##AK302409|PIWIL3|440822|piwi-like 3 (Drosophila)##AK315806|PIWIL3|440822|piwi-like 3 (Drosophila)##NM_001032365|GGT1|2678|gamma-glutamyltransferase 1##BC130647|TMEM211|255349|transmembrane protein 211##BC130649|TMEM211|255349|transmembrane protein 211##CR456388|TMEM211|255349|transmembrane protein 211##NM_001001663|TMEM211|255349|transmembrane protein 211##BC171801|KIAA1671|85379|KIAA1671##NM_001145206|KIAA1671|85379|KIAA1671##AK025418|KIAA1671|85379|KIAA1671	0.994444	CTCF.p2:8:0.994
chr2	240323590	240323704	reg1035391.p2	3.425	+	TSC_hg19_v1_chr2_-_240323341 AK308791	-299	-	TSC_hg19_v1_chr2_-_240322695 BC039904	-949	-	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	-999	-	AF453834 TSC_hg19_v1_chr2_-_240964750 CU678462 DQ891011 DQ894191 BC031332 AF087661 AB209440 AK290778 BC003417 AF087854	641114	-	TSC_hg19_v1_chr2_-_240964807 NM_004544	641165	-	NM_001005853 BC137561 BC137562	646228	-	AK308791|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##AF453834|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ891011|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ894191|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC031332|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087661|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AB209440|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AK290778|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC003417|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087854|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_004544|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_001005853|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137561|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137562|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2	0.986943	CTCF.p2:57:0.987
chr3	52089707	52089787	reg1026133.p1	3.425	+	BC008926 NM_000992 TSC_hg19_v1_chr3_-_52029968	-59784	-	TSC_hg19_v1_chr3_-_52029912 BC070190 AK289538 AK311884 D28412	-59834	-	TSC_hg19_v1_chr3_-_52029890 BC071663 U49083 U10248 Z49148 BC071909 BC070481	-59866	-	X93921 TSC_hg19_v1_chr3_-_52090192 BC019107 AF508727 BC104880 BC104882 NM_001947	528	-	TSC_hg19_v1_chr3_-_52188413 BC119692 AK075289 BC119693 AK315688	98683	-	BC110877 NM_001161580 NM_001161581 NM_015426	98958	-	BC008926|RPL29|6159|ribosomal protein L29##NM_000992|RPL29|6159|ribosomal protein L29##BC070190|RPL29|6159|ribosomal protein L29##AK289538|RPL29|6159|ribosomal protein L29##AK311884|RPL29|6159|ribosomal protein L29##D28412|RPL29|6159|ribosomal protein L29##BC071663|RPL29|6159|ribosomal protein L29##U49083|RPL29|6159|ribosomal protein L29##U10248|RPL29|6159|ribosomal protein L29##Z49148|RPL29|6159|ribosomal protein L29##BC071909|RPL29|6159|ribosomal protein L29##BC070481|RPL29|6159|ribosomal protein L29##X93921|DUSP7|1849|dual specificity phosphatase 7##BC019107|DUSP7|1849|dual specificity phosphatase 7##AF508727|DUSP7|1849|dual specificity phosphatase 7##BC104880|DUSP7|1849|dual specificity phosphatase 7##BC104882|DUSP7|1849|dual specificity phosphatase 7##NM_001947|DUSP7|1849|dual specificity phosphatase 7##BC119692|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK075289|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC119693|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK315688|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC110877|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161580|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161581|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_015426|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)	0.0	
chr3	53840382	53840448	reg1039720.p2	3.425	+	NM_000720 NM_001128839 NM_001128840 M83566 EU363339	-311304	+	TSC_hg19_v1_chr3_+_53528709 M76558	-311756	+	TSC_hg19_v1_chr3_-_53381571 AB590177 CU675659 DQ893260 DQ896589 BC007439 AK295205 AB075507 AK001969 AY146651 AJ275986 NM_018403	-458822	-	TSC_hg19_v1_chr3_-_53880427 NM_018397	40004	-	TSC_hg19_v1_chr3_+_53880576 NM_018725	40157	+	TSC_hg19_v1_chr3_+_53880594 AK307749	40180	+	NM_000720|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128839|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##NM_001128840|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M83566|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##EU363339|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##M76558|CACNA1D|776|calcium channel, voltage-dependent, L type, alpha 1D subunit##DQ893260|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##DQ896589|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##BC007439|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK295205|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AB075507|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AK001969|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AY146651|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##AJ275986|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018403|DCP1A|55802|DCP1 decapping enzyme homolog A (S. cerevisiae)##NM_018397|CHDH|55349|choline dehydrogenase##NM_018725|IL17RB|55540|interleukin 17 receptor B##AK307749|IL17RB|55540|interleukin 17 receptor B	0.154196	
chr6	157886318	157886428	reg1034069.p1	3.425	+	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	-83834	+	TSC_hg19_v1_chr6_-_157745183 NM_018452	-141156	-	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	-141789	-	TSC_hg19_v1_chr6_+_158244281 NM_016224 BC005022	357916	+	TSC_hg19_v1_chr6_+_158244308 AF172847 AK314360 AF131214 AF121859	358001	+	AK294480 NM_003898 TSC_hg19_v1_chr6_+_158402887	516514	+	AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_018452|TMEM242|729515|transmembrane protein 242##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_016224|SNX9|51429|sorting nexin 9##BC005022|SNX9|51429|sorting nexin 9##AF172847|SNX9|51429|sorting nexin 9##AK314360|SNX9|51429|sorting nexin 9##AF131214|SNX9|51429|sorting nexin 9##AF121859|SNX9|51429|sorting nexin 9##AK294480|SYNJ2|8871|synaptojanin 2##NM_003898|SYNJ2|8871|synaptojanin 2	0.0	
chr8	10498808	10498913	reg1042651.p2	3.425	+	BC033497 NM_001197020 NM_198464 AY358867	-115793	+	AK293488 AY958430 AY958431 BC047552 NM_001135671 NM_001199729	-545797	+	TSC_hg19_v1_chr8_+_9911861 AJ242973 BC054033 NM_001135670 NM_012331 AF086925 AF183420	-586981	+	AY168341 AY168342 AY168343 AY168344 AY168345 AY168346 NM_178857 AJ491324	13780	-	BC065837 BC132852 BC132854 NM_001040032 AK131443 BC038534 HQ258143	31299	+	AJ409320 BT006693 CU687196 AB464717 BC071947 BC004299 AK055556 AK223574 NM_031439 TSC_hg19_v1_chr8_-_10588025	89124	-	BC033497|PRSS55|203074|protease, serine, 55##NM_001197020|PRSS55|203074|protease, serine, 55##NM_198464|PRSS55|203074|protease, serine, 55##AY358867|PRSS55|203074|protease, serine, 55##AK293488|MSRA|4482|methionine sulfoxide reductase A##AY958430|MSRA|4482|methionine sulfoxide reductase A##AY958431|MSRA|4482|methionine sulfoxide reductase A##BC047552|MSRA|4482|methionine sulfoxide reductase A##NM_001135671|MSRA|4482|methionine sulfoxide reductase A##NM_001199729|MSRA|4482|methionine sulfoxide reductase A##AJ242973|MSRA|4482|methionine sulfoxide reductase A##BC054033|MSRA|4482|methionine sulfoxide reductase A##NM_001135670|MSRA|4482|methionine sulfoxide reductase A##NM_012331|MSRA|4482|methionine sulfoxide reductase A##AF086925|MSRA|4482|methionine sulfoxide reductase A##AF183420|MSRA|4482|methionine sulfoxide reductase A##AY168341|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168342|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168343|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168344|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168345|RP1L1|94137|retinitis pigmentosa 1-like 1##AY168346|RP1L1|94137|retinitis pigmentosa 1-like 1##NM_178857|RP1L1|94137|retinitis pigmentosa 1-like 1##AJ491324|RP1L1|94137|retinitis pigmentosa 1-like 1##BC065837|C8orf74|203076|chromosome 8 open reading frame 74##BC132852|C8orf74|203076|chromosome 8 open reading frame 74##BC132854|C8orf74|203076|chromosome 8 open reading frame 74##NM_001040032|C8orf74|203076|chromosome 8 open reading frame 74##AK131443|C8orf74|203076|chromosome 8 open reading frame 74##BC038534|C8orf74|203076|chromosome 8 open reading frame 74##HQ258143|C8orf74|203076|chromosome 8 open reading frame 74##AJ409320|SOX7|83595|SRY (sex determining region Y)-box 7##BT006693|SOX7|83595|SRY (sex determining region Y)-box 7##BC071947|SOX7|83595|SRY (sex determining region Y)-box 7##BC004299|SOX7|83595|SRY (sex determining region Y)-box 7##AK055556|SOX7|83595|SRY (sex determining region Y)-box 7##AK223574|SOX7|83595|SRY (sex determining region Y)-box 7##NM_031439|SOX7|83595|SRY (sex determining region Y)-box 7	0.045679	
chr9	16726225	16726348	reg1040267.p1	3.425	+	AK308284 TSC_hg19_v1_chr9_+_15553040 BX537933 CR936775 AY422473 NM_173550	-1173265	+	TSC_hg19_v1_chr9_-_15510969 BC040032 BC013160 AF432220 BC064135 AF063020 BC022971 BC033817 BC044568 NM_001128217 NM_033222	-1215326	-	AF098483 AF098482 NM_021144	-1216039	-	TSC_hg19_v1_chr9_-_16727889 AY438376	1611	-	DQ884938 DQ884939 DQ884940 DQ884941 TSC_hg19_v1_chr9_-_16870669 AK131398	144381	-	TSC_hg19_v1_chr9_-_16870747 CR933649 AK299073 NM_017637	144480	-	AK308284|C9orf93|203238|chromosome 9 open reading frame 93##BX537933|C9orf93|203238|chromosome 9 open reading frame 93##CR936775|C9orf93|203238|chromosome 9 open reading frame 93##AY422473|C9orf93|203238|chromosome 9 open reading frame 93##NM_173550|C9orf93|203238|chromosome 9 open reading frame 93##BC040032|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC013160|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF432220|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC064135|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF063020|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC022971|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC033817|PSIP1|11168|PC4 and SFRS1 interacting protein 1##BC044568|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_001128217|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_033222|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098483|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AF098482|PSIP1|11168|PC4 and SFRS1 interacting protein 1##NM_021144|PSIP1|11168|PC4 and SFRS1 interacting protein 1##AY438376|BNC2|54796|basonuclin 2##DQ884938|BNC2|54796|basonuclin 2##DQ884939|BNC2|54796|basonuclin 2##DQ884940|BNC2|54796|basonuclin 2##DQ884941|BNC2|54796|basonuclin 2##AK131398|BNC2|54796|basonuclin 2##CR933649|BNC2|54796|basonuclin 2##AK299073|BNC2|54796|basonuclin 2##NM_017637|BNC2|54796|basonuclin 2	0.0	
chr10	125803201	125803319	reg1038217.p2	3.424	+	BC137492 BC146862 AY358565 NM_198148	-151764	-	AJ505757 NM_153442 BC112011 BC113462	-377383	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-888904	+	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	48639	-	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	49893	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	304213	-	BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase	0.0	
chr1	12147812	12147882	reg1027154.p1	3.424	+	M83554 NM_001243 BC136400 BC171762 S75768	-24303	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-68277	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-68313	+	D86042 BC063482 NM_152942 BC073839 BC141804	38169	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	79214	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	79264	+	M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr1	244614332	244614439	reg1027015.p2	3.424	+	BC054479 NM_001012970	-98449	+	TSC_hg19_v1_chr1_+_244217286 AK310634	-397090	+	BC078175 AJ001388 NM_006352	-397842	+	CU680302 EU831433 EU831525 TSC_hg19_v1_chr1_-_244615212 AK025514 AK303886 BC012356	791	-	TSC_hg19_v1_chr1_-_244615392 AK308749 NM_001126	953	-	NM_001130957 NM_001242340 NM_173807 TSC_hg19_v1_chr1_+_244624690 BC032859 BC028392 AK303059 BX648685 AK302609 DQ891006 EU176575 CU689566	10316	+	BC054479|C1orf100|200159|chromosome 1 open reading frame 100##NM_001012970|C1orf100|200159|chromosome 1 open reading frame 100##BC078175|ZNF238|10472|zinc finger protein 238##AJ001388|ZNF238|10472|zinc finger protein 238##NM_006352|ZNF238|10472|zinc finger protein 238##EU831433|ADSS|159|adenylosuccinate synthase##EU831525|ADSS|159|adenylosuccinate synthase##AK025514|ADSS|159|adenylosuccinate synthase##AK303886|ADSS|159|adenylosuccinate synthase##BC012356|ADSS|159|adenylosuccinate synthase##AK308749|ADSS|159|adenylosuccinate synthase##NM_001126|ADSS|159|adenylosuccinate synthase##NM_001130957|C1orf101|257044|chromosome 1 open reading frame 101##NM_001242340|C1orf101|257044|chromosome 1 open reading frame 101##NM_173807|C1orf101|257044|chromosome 1 open reading frame 101##BC032859|C1orf101|257044|chromosome 1 open reading frame 101##BC028392|C1orf101|257044|chromosome 1 open reading frame 101##AK303059|C1orf101|257044|chromosome 1 open reading frame 101##BX648685|C1orf101|257044|chromosome 1 open reading frame 101##AK302609|C1orf101|257044|chromosome 1 open reading frame 101##DQ891006|C1orf101|257044|chromosome 1 open reading frame 101##EU176575|C1orf101|257044|chromosome 1 open reading frame 101	0.0	
chr15	65117682	65117763	reg1034082.p1	3.424	+	BC131612 BC148208 AY369207 NM_194272 TSC_hg19_v1_chr15_-_65067789 AK127873	-49976	-	TSC_hg19_v1_chr15_-_64995461 BC047755 NM_002537	-122253	-	TSC_hg19_v1_chr15_-_64995415 AF057297 BC063577 BC073877 BC035493 BC092483	-122320	-	BC137503 BC137504 TSC_hg19_v1_chr15_-_65117814 BC018978 AK026345 EU084033 NM_025049 AB185926 AB185927	113	-	AK311036 NM_001195059 NM_025201 TSC_hg19_v1_chr15_+_65134113 AK096203 BC008744 AF494534	16385	+	TSC_hg19_v1_chr15_+_65204100 AK098736 NM_182703 AK075298 BC110610 AK307698	86367	+	BC131612|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC148208|RBPMS2|348093|RNA binding protein with multiple splicing 2##AY369207|RBPMS2|348093|RNA binding protein with multiple splicing 2##NM_194272|RBPMS2|348093|RNA binding protein with multiple splicing 2##AK127873|RBPMS2|348093|RNA binding protein with multiple splicing 2##BC047755|OAZ2|4947|ornithine decarboxylase antizyme 2##NM_002537|OAZ2|4947|ornithine decarboxylase antizyme 2##AF057297|OAZ2|4947|ornithine decarboxylase antizyme 2##BC063577|OAZ2|4947|ornithine decarboxylase antizyme 2##BC073877|OAZ2|4947|ornithine decarboxylase antizyme 2##BC035493|OAZ2|4947|ornithine decarboxylase antizyme 2##BC092483|OAZ2|4947|ornithine decarboxylase antizyme 2##BC137503|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC137504|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##BC018978|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AK026345|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##EU084033|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_025049|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185926|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##AB185927|PIF1|80119|PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae)##NM_001195059|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##NM_025201|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK096203|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##BC008744|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AF494534|PLEKHO2|80301|pleckstrin homology domain containing, family O member 2##AK098736|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##NM_182703|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK075298|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##BC110610|ANKDD1A|348094|ankyrin repeat and death domain containing 1A##AK307698|ANKDD1A|348094|ankyrin repeat and death domain containing 1A	0.0	
chr19	17666131	17666246	reg1035920.p1	3.424	+	AK300046 AK097121 TSC_hg19_v1_chr19_+_17638075 AK298062 AK074069 AK301159 BC053606	-28100	+	AY254197 AY254198 AY254199 NM_001098524 NM_173544	-32079	+	TSC_hg19_v1_chr19_+_17622445 BC017706 BC014006 AJ243972 AB463386 DQ893462 DQ896322	-43726	+	TSC_hg19_v1_chr19_+_17666429 AK074941	220	+	TSC_hg19_v1_chr19_+_17666457 BC108308	275	+	TSC_hg19_v1_chr19_+_17666507 AK075541 NM_024656	323	+	AK300046|FAM129C|199786|family with sequence similarity 129, member C##AK097121|FAM129C|199786|family with sequence similarity 129, member C##AK298062|FAM129C|199786|family with sequence similarity 129, member C##AK074069|FAM129C|199786|family with sequence similarity 129, member C##AK301159|FAM129C|199786|family with sequence similarity 129, member C##BC053606|FAM129C|199786|family with sequence similarity 129, member C##AY254197|FAM129C|199786|family with sequence similarity 129, member C##AY254198|FAM129C|199786|family with sequence similarity 129, member C##AY254199|FAM129C|199786|family with sequence similarity 129, member C##NM_001098524|FAM129C|199786|family with sequence similarity 129, member C##NM_173544|FAM129C|199786|family with sequence similarity 129, member C##BC017706|PGLS|25796|6-phosphogluconolactonase##BC014006|PGLS|25796|6-phosphogluconolactonase##AJ243972|PGLS|25796|6-phosphogluconolactonase##DQ893462|PGLS|25796|6-phosphogluconolactonase##DQ896322|PGLS|25796|6-phosphogluconolactonase##AK074941|GLT25D1|79709|glycosyltransferase 25 domain containing 1##BC108308|GLT25D1|79709|glycosyltransferase 25 domain containing 1##AK075541|GLT25D1|79709|glycosyltransferase 25 domain containing 1##NM_024656|GLT25D1|79709|glycosyltransferase 25 domain containing 1	0.22461	CTCF.p2:-33:0.225
chr2	69664097	69664192	reg1037488.p1	3.424	+	TSC_hg19_v1_chr2_-_69614353 M90516 BC045641 NM_001244710 NM_002056	-49739	-	TSC_hg19_v1_chr2_+_69240310 NM_018153 NM_032208 NM_053034 AF279145 AK001463 AY928974 AY928975 AY928976 AY928977 AK223273 BC012074 AK309553 AF421380 AK292113 CU680200 EU832615 EU832687	-423761	+	AB039886 AJ966789 NM_019617 AB590637 AY139184 AK098489 AY456961 BC059778 AY359050	-462402	+	AJ132584 AF132967 AB528729 HQ258750 TSC_hg19_v1_chr2_-_69664568 AK300700 AK308567	429	-	TSC_hg19_v1_chr2_-_69664606 AY286306 AY286307 BX538347	470	-	BC113692 BC113694 AY335194 NM_001002755 NM_001002756 NM_001002757 NM_015700 TSC_hg19_v1_chr2_-_69664788	615	-	M90516|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##BC045641|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_001244710|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_002056|GFPT1|2673|glutamine--fructose-6-phosphate transaminase 1##NM_018153|ANTXR1|84168|anthrax toxin receptor 1##NM_032208|ANTXR1|84168|anthrax toxin receptor 1##NM_053034|ANTXR1|84168|anthrax toxin receptor 1##AF279145|ANTXR1|84168|anthrax toxin receptor 1##AK001463|ANTXR1|84168|anthrax toxin receptor 1##AK223273|ANTXR1|84168|anthrax toxin receptor 1##BC012074|ANTXR1|84168|anthrax toxin receptor 1##AK309553|ANTXR1|84168|anthrax toxin receptor 1##AF421380|ANTXR1|84168|anthrax toxin receptor 1##AK292113|ANTXR1|84168|anthrax toxin receptor 1##EU832615|ANTXR1|84168|anthrax toxin receptor 1##EU832687|ANTXR1|84168|anthrax toxin receptor 1##AB039886|GKN1|56287|gastrokine 1##AJ966789|GKN1|56287|gastrokine 1##NM_019617|GKN1|56287|gastrokine 1##AY139184|GKN1|56287|gastrokine 1##AK098489|GKN1|56287|gastrokine 1##AY456961|GKN1|56287|gastrokine 1##BC059778|GKN1|56287|gastrokine 1##AY359050|GKN1|56287|gastrokine 1##AJ132584|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AF132967|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##HQ258750|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK300700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AK308567|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286306|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY286307|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BX538347|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BC113692|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##BC113694|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##AY335194|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_001002755|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_001002756|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_001002757|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)##NM_015700|NFU1|27247|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	0.0	
chr3	116736026	116736092	reg1032737.p1	3.424	+	TSC_hg19_v1_chr3_-_116164363 BC033803 NM_002338	-571686	-	AK315286 TSC_hg19_v1_chr3_-_116164338	-571728	-	TSC_hg19_v1_chr3_+_115342501 AK289699 M25667 AK313658 BX648458 AK290100 BC007936 AM392759 AM393509 DQ893244 DQ896574 AB463057 BT019771 BT019810	-1393640	+	AB079879 AX781653 AK296503 TSC_hg19_v1_chr3_-_118753633 AK122611	2017474	-	AB071618 NM_001015887 TSC_hg19_v1_chr3_-_118753697 AY358141	2017624	-	AK097667 NM_152538 AK292387	2128838	-	BC033803|LSAMP|4045|limbic system-associated membrane protein##NM_002338|LSAMP|4045|limbic system-associated membrane protein##AK315286|LSAMP|4045|limbic system-associated membrane protein##AK289699|GAP43|2596|growth associated protein 43##M25667|GAP43|2596|growth associated protein 43##AK313658|GAP43|2596|growth associated protein 43##BX648458|GAP43|2596|growth associated protein 43##AK290100|GAP43|2596|growth associated protein 43##BC007936|GAP43|2596|growth associated protein 43##AM392759|GAP43|2596|growth associated protein 43##AM393509|GAP43|2596|growth associated protein 43##DQ893244|GAP43|2596|growth associated protein 43##DQ896574|GAP43|2596|growth associated protein 43##BT019771|GAP43|2596|growth associated protein 43##BT019810|GAP43|2596|growth associated protein 43##AB079879|IGSF11|152404|immunoglobulin superfamily, member 11##AK296503|IGSF11|152404|immunoglobulin superfamily, member 11##AK122611|IGSF11|152404|immunoglobulin superfamily, member 11##AB071618|IGSF11|152404|immunoglobulin superfamily, member 11##NM_001015887|IGSF11|152404|immunoglobulin superfamily, member 11##AY358141|IGSF11|152404|immunoglobulin superfamily, member 11##AK097667|IGSF11|152404|immunoglobulin superfamily, member 11##NM_152538|IGSF11|152404|immunoglobulin superfamily, member 11##AK292387|IGSF11|152404|immunoglobulin superfamily, member 11	0.0	
chr4	8200888	8201014	reg1031824.p2	3.424	+	DQ413176 AJ748600 AJ748601 TSC_hg19_v1_chr4_-_8160541 BC122567 AK130044 AK094754 BC067214 NM_001130083 NM_001130084 NM_001130085 NM_001130086 NM_001130087 NM_001130088 NM_032432	-40417	-	TSC_hg19_v1_chr4_-_8129388 AK301060	-71566	-	TSC_hg19_v1_chr4_-_8073714 AK094798	-127235	-	TSC_hg19_v1_chr4_+_8201038 BC030283 AK074093 NM_018986 BC068094 AK074402 AK126165 BC131785	81	+	TSC_hg19_v1_chr4_+_8271480 NM_053044 AY040094 BC034390 BC035717 AY280665 AY280666 AB528940 DQ891188 DQ894371	70624	+	TSC_hg19_v1_chr4_-_8430196 AK313242	229250	-	DQ413176|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748600|ABLIM2|84448|actin binding LIM protein family, member 2##AJ748601|ABLIM2|84448|actin binding LIM protein family, member 2##BC122567|ABLIM2|84448|actin binding LIM protein family, member 2##AK130044|ABLIM2|84448|actin binding LIM protein family, member 2##AK094754|ABLIM2|84448|actin binding LIM protein family, member 2##BC067214|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130083|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130084|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130085|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130086|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130087|ABLIM2|84448|actin binding LIM protein family, member 2##NM_001130088|ABLIM2|84448|actin binding LIM protein family, member 2##NM_032432|ABLIM2|84448|actin binding LIM protein family, member 2##AK301060|ABLIM2|84448|actin binding LIM protein family, member 2##AK094798|ABLIM2|84448|actin binding LIM protein family, member 2##BC030283|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074093|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##NM_018986|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC068094|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK074402|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##AK126165|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##BC131785|SH3TC1|54436|SH3 domain and tetratricopeptide repeats 1##NM_053044|HTRA3|94031|HtrA serine peptidase 3##AY040094|HTRA3|94031|HtrA serine peptidase 3##BC034390|HTRA3|94031|HtrA serine peptidase 3##BC035717|HTRA3|94031|HtrA serine peptidase 3##AY280665|HTRA3|94031|HtrA serine peptidase 3##AY280666|HTRA3|94031|HtrA serine peptidase 3##DQ891188|HTRA3|94031|HtrA serine peptidase 3##DQ894371|HTRA3|94031|HtrA serine peptidase 3##AK313242|ACOX3|8310|acyl-CoA oxidase 3, pristanoyl	0.0	
chr5	67611968	67612050	reg1030210.p2	3.424	+	AK094785 NM_001242466 AK294919	-23557	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	-25463	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	-27715	+	NM_001251969 NM_022902 NM_024055 BC017441 TSC_hg19_v1_chr5_+_68389821	777794	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	777873	+	AK292925 TSC_hg19_v1_chr5_+_68389913	777904	+	AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001251969|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_022902|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_024055|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC017441|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5	0.0	
chr5	78183788	78183879	reg1040393.p1	3.424	+	TSC_hg19_v1_chr5_-_77944584 NM_005779	-239267	-	CR936660 TSC_hg19_v1_chr5_-_77845052	-338810	-	TSC_hg19_v1_chr5_-_77806191 AK125227	-377637	-	J05225 TSC_hg19_v1_chr5_-_78281101	97255	-	AK290865 TSC_hg19_v1_chr5_-_78281134	97300	-	TSC_hg19_v1_chr5_-_78281142 AK314903	97313	-	NM_005779|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##CR936660|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##AK125227|LHFPL2|10184|lipoma HMGIC fusion partner-like 2##J05225|ARSB|411|arylsulfatase B##AK290865|ARSB|411|arylsulfatase B##AK314903|ARSB|411|arylsulfatase B	0.0	
chr5	79298290	79298370	reg1039283.p1	3.424	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-11372	-	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-312658	+	AK095818 TSC_hg19_v1_chr5_+_78908395	-389909	+	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	32834	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	253555	-	NM_032567 AK098575 AK314007 AF333098 BC033798	317485	+	AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##AK095818|PAPD4|167153|PAP associated domain containing 4##BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1	0.0	
chr5	89825721	89825901	reg1012341.p1	3.424	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-445	-	NM_006467 AK295434 U93868	-55109	+	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	-55233	-	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	28803	+	AK091866 TSC_hg19_v1_chr5_-_90610220	784434	-	TSC_hg19_v1_chr5_+_90676181 BC043415	850351	+	BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716	0.0	
chr6	167667259	167667339	reg1041034.p2	3.424	+	NM_001145121	-83219	+	BC095537 NM_005299	-95983	-	NM_031409 U68031 U68030	-131050	+	AK091987 AX747293 NM_001143947 NM_018974 AJ422141 AJ508812 BC098248 BC099718 BC105635	37577	+	AK093039 AK225984 AX747876 NM_031949 BC030650 AK301755 BC047411 AK314450 AY026506 CU688966 CU690408	71318	+	BC068592 U03399 BC063451 BC033909 BC034995 NM_004610	130658	-	NM_001145121|TCP10L2|401285|t-complex 10-like 2 (mouse)##BC095537|GPR31|2853|G protein-coupled receptor 31##NM_005299|GPR31|2853|G protein-coupled receptor 31##NM_031409|CCR6|1235|chemokine (C-C motif) receptor 6##U68031|CCR6|1235|chemokine (C-C motif) receptor 6##U68030|CCR6|1235|chemokine (C-C motif) receptor 6##AK091987|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_001143947|UNC93A|54346|unc-93 homolog A (C. elegans)##NM_018974|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ422141|UNC93A|54346|unc-93 homolog A (C. elegans)##AJ508812|UNC93A|54346|unc-93 homolog A (C. elegans)##BC098248|UNC93A|54346|unc-93 homolog A (C. elegans)##BC099718|UNC93A|54346|unc-93 homolog A (C. elegans)##BC105635|UNC93A|54346|unc-93 homolog A (C. elegans)##AK093039|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK225984|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##NM_031949|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC030650|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK301755|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC047411|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AK314450|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##AY026506|TTLL2|83887|tubulin tyrosine ligase-like family, member 2##BC068592|TCP10|6953|t-complex 10 homolog (mouse)##U03399|TCP10|6953|t-complex 10 homolog (mouse)##BC063451|TCP10|6953|t-complex 10 homolog (mouse)##NM_004610|TCP10|6953|t-complex 10 homolog (mouse)	0.0	
chr9	12554812	12554886	reg1037901.p1	3.424	+	BC028038 NM_002839	-1942127	-	TSC_hg19_v1_chr9_+_8858136 AK094342	-3696716	+	BC106713 BC106714 BC106715 BC106716 NM_001040712 NM_001171025 NM_130391 NM_130392 NM_130393	-3820930	-	NM_000550 X51420 BC052608	138576	+	TSC_hg19_v1_chr9_+_12775021 NM_203403 AB073606 AK095824 BC036923	220167	+	HQ257895 TSC_hg19_v1_chr9_+_12775847	220932	+	BC028038|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_002839|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106713|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106714|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106715|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##BC106716|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001040712|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_001171025|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130391|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130392|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_130393|PTPRD|5789|protein tyrosine phosphatase, receptor type, D##NM_000550|TYRP1|7306|tyrosinase-related protein 1##X51420|TYRP1|7306|tyrosinase-related protein 1##BC052608|TYRP1|7306|tyrosinase-related protein 1##NM_203403|C9orf150|286343|chromosome 9 open reading frame 150##AB073606|C9orf150|286343|chromosome 9 open reading frame 150##AK095824|C9orf150|286343|chromosome 9 open reading frame 150##BC036923|C9orf150|286343|chromosome 9 open reading frame 150##HQ257895|C9orf150|286343|chromosome 9 open reading frame 150	0.958478	CTCF.p2:-10:0.958
chr10	103061569	103061651	reg1008315.p2	3.423	+	BC136321 BC069156 NM_006562 X90828	-72908	-	BC130530 NM_001195517 NM_005521 S38742 M75952 AB464289	-170432	+	BC019674 NM_001085398	-170708	-	TSC_hg19_v1_chr10_+_103113869 NM_003939 NM_033637 AK313417 CR749295 AF129530 Y14153 BC027994 GU727631 AK313353 AY207475 AY207476 AK295870 AB587367 AF101784 CU693362	52262	+	BC003548 TSC_hg19_v1_chr10_-_103347917 BC068529 AK292225 AJ131890 AK293602	286319	-	TSC_hg19_v1_chr10_-_103348007 AK293421 AK300862 AK022476 AK293657 AK021600 NM_001174084 NM_001174085 NM_013274	286399	-	BC136321|LBX1|10660|ladybird homeobox 1##BC069156|LBX1|10660|ladybird homeobox 1##NM_006562|LBX1|10660|ladybird homeobox 1##X90828|LBX1|10660|ladybird homeobox 1##BC130530|TLX1|3195|T-cell leukemia homeobox 1##NM_001195517|TLX1|3195|T-cell leukemia homeobox 1##NM_005521|TLX1|3195|T-cell leukemia homeobox 1##S38742|TLX1|3195|T-cell leukemia homeobox 1##M75952|TLX1|3195|T-cell leukemia homeobox 1##BC019674|TLX1NB|100038246|TLX1 neighbor##NM_001085398|TLX1NB|100038246|TLX1 neighbor##NM_003939|BTRC|8945|beta-transducin repeat containing##NM_033637|BTRC|8945|beta-transducin repeat containing##AK313417|BTRC|8945|beta-transducin repeat containing##CR749295|BTRC|8945|beta-transducin repeat containing##AF129530|BTRC|8945|beta-transducin repeat containing##Y14153|BTRC|8945|beta-transducin repeat containing##BC027994|BTRC|8945|beta-transducin repeat containing##GU727631|BTRC|8945|beta-transducin repeat containing##AK313353|BTRC|8945|beta-transducin repeat containing##AY207475|BTRC|8945|beta-transducin repeat containing##AY207476|BTRC|8945|beta-transducin repeat containing##AK295870|BTRC|8945|beta-transducin repeat containing##AF101784|BTRC|8945|beta-transducin repeat containing##BC003548|POLL|27343|polymerase (DNA directed), lambda##BC068529|POLL|27343|polymerase (DNA directed), lambda##AK292225|POLL|27343|polymerase (DNA directed), lambda##AJ131890|POLL|27343|polymerase (DNA directed), lambda##AK293602|POLL|27343|polymerase (DNA directed), lambda##AK293421|POLL|27343|polymerase (DNA directed), lambda##AK300862|POLL|27343|polymerase (DNA directed), lambda##AK022476|POLL|27343|polymerase (DNA directed), lambda##AK293657|POLL|27343|polymerase (DNA directed), lambda##AK021600|POLL|27343|polymerase (DNA directed), lambda##NM_001174084|POLL|27343|polymerase (DNA directed), lambda##NM_001174085|POLL|27343|polymerase (DNA directed), lambda##NM_013274|POLL|27343|polymerase (DNA directed), lambda	0.0	
chr10	31016071	31016251	reg1008124.p2	3.423	+	AF139543 BC066294 NM_183058	-97526	-	TSC_hg19_v1_chr10_+_30723112 AK313295 AK290320 D14497	-293040	+	TSC_hg19_v1_chr10_+_30722975 NM_001244134 NM_005204	-293222	+	TSC_hg19_v1_chr10_-_31288450 AK131357 NM_001143769	272291	-	TSC_hg19_v1_chr10_-_31320787 BC104669 DQ356012 AK292730 AK294253 AK057323 NM_001143766 NM_001143767 NM_001143768 NM_001143770 NM_001143771 NM_182755	304660	-	TSC_hg19_v1_chr10_+_31607451 BX647794	591275	+	AF139543|LYZL2|119180|lysozyme-like 2##BC066294|LYZL2|119180|lysozyme-like 2##NM_183058|LYZL2|119180|lysozyme-like 2##AK313295|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK290320|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##D14497|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_001244134|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##NM_005204|MAP3K8|1326|mitogen-activated protein kinase kinase kinase 8##AK131357|ZNF438|220929|zinc finger protein 438##NM_001143769|ZNF438|220929|zinc finger protein 438##BC104669|ZNF438|220929|zinc finger protein 438##DQ356012|ZNF438|220929|zinc finger protein 438##AK292730|ZNF438|220929|zinc finger protein 438##AK294253|ZNF438|220929|zinc finger protein 438##AK057323|ZNF438|220929|zinc finger protein 438##NM_001143766|ZNF438|220929|zinc finger protein 438##NM_001143767|ZNF438|220929|zinc finger protein 438##NM_001143768|ZNF438|220929|zinc finger protein 438##NM_001143770|ZNF438|220929|zinc finger protein 438##NM_001143771|ZNF438|220929|zinc finger protein 438##NM_182755|ZNF438|220929|zinc finger protein 438##BX647794|ZEB1|6935|zinc finger E-box binding homeobox 1	0.0	
chr11	92286253	92286369	reg1041004.p2	3.423	+	NM_001008781	-201050	+	TSC_hg19_v1_chr11_+_89984372 EU302123	-2301901	+	AK290231 NM_001144073 NM_012124	-2329780	-	BC069163 NM_005959 U25341 AY521019	416528	+	TSC_hg19_v1_chr11_-_92930978 CU690400	644676	-	TSC_hg19_v1_chr11_-_92931106 AY162216 NM_152313 BC047374	644774	-	NM_001008781|FAT3|120114|FAT tumor suppressor homolog 3 (Drosophila)##AK290231|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_001144073|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##NM_012124|CHORDC1|26973|cysteine and histidine-rich domain (CHORD) containing 1##BC069163|MTNR1B|4544|melatonin receptor 1B##NM_005959|MTNR1B|4544|melatonin receptor 1B##U25341|MTNR1B|4544|melatonin receptor 1B##AY521019|MTNR1B|4544|melatonin receptor 1B##AY162216|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##NM_152313|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4##BC047374|SLC36A4|120103|solute carrier family 36 (proton/amino acid symporter), member 4	0.042125	
chr12	125919496	125919637	reg1031463.p1	3.423	+	NM_052907	-108405	+	TSC_hg19_v1_chr12_+_125549988 AK308779 AK024036 AK022451 AK304176 BC051862 AB054121 AY091468	-369498	+	BC040490 NM_023928 BC041000 TSC_hg19_v1_chr12_+_125549942	-369625	+	NM_001136103	2832381	+	BC028394 AK095717 TSC_hg19_v1_chr12_-_129308529 AY050629 BC146803 AY038999 NM_145648	3388877	-	BC043528 TSC_hg19_v1_chr12_+_129337985	3418418	+	NM_052907|TMEM132B|114795|transmembrane protein 132B##AK308779|AACS|65985|acetoacetyl-CoA synthetase##AK024036|AACS|65985|acetoacetyl-CoA synthetase##AK022451|AACS|65985|acetoacetyl-CoA synthetase##AK304176|AACS|65985|acetoacetyl-CoA synthetase##BC051862|AACS|65985|acetoacetyl-CoA synthetase##AB054121|AACS|65985|acetoacetyl-CoA synthetase##AY091468|AACS|65985|acetoacetyl-CoA synthetase##BC040490|AACS|65985|acetoacetyl-CoA synthetase##NM_023928|AACS|65985|acetoacetyl-CoA synthetase##BC041000|AACS|65985|acetoacetyl-CoA synthetase##NM_001136103|TMEM132C|92293|transmembrane protein 132C##BC028394|SLC15A4|121260|solute carrier family 15, member 4##AK095717|SLC15A4|121260|solute carrier family 15, member 4##AY050629|SLC15A4|121260|solute carrier family 15, member 4##BC146803|SLC15A4|121260|solute carrier family 15, member 4##AY038999|SLC15A4|121260|solute carrier family 15, member 4##NM_145648|SLC15A4|121260|solute carrier family 15, member 4##BC043528|GLT1D1|144423|glycosyltransferase 1 domain containing 1	0.0	
chr1	213155204	213155385	reg1040354.p1	3.423	+	AK302675 TSC_hg19_v1_chr1_+_213124038	-31271	+	TSC_hg19_v1_chr1_+_213123945 AK290973 NM_001136474 NM_001136475 NM_024749 AK022567 AK096605 BC053836 BC051856 BC028194	-31377	+	AF118637 NM_014053 AK314481 BC048312 TSC_hg19_v1_chr1_+_213031754	-123614	+	TSC_hg19_v1_chr1_-_213188830 AK299208	33517	-	TSC_hg19_v1_chr1_-_213189125 AK294479 AK311276 AK299365 BC047469 AK295116 AF510741 AL079275 NM_144567	33833	-	TSC_hg19_v1_chr1_+_213224631 AK122989 NM_001136138 NM_012424 AK299298 AF477978 AK122921 AK295053	69293	+	AK302675|VASH2|79805|vasohibin 2##AK290973|VASH2|79805|vasohibin 2##NM_001136474|VASH2|79805|vasohibin 2##NM_001136475|VASH2|79805|vasohibin 2##NM_024749|VASH2|79805|vasohibin 2##AK022567|VASH2|79805|vasohibin 2##AK096605|VASH2|79805|vasohibin 2##BC053836|VASH2|79805|vasohibin 2##BC051856|VASH2|79805|vasohibin 2##BC028194|VASH2|79805|vasohibin 2##AF118637|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##NM_014053|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK314481|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##BC048312|FLVCR1|28982|feline leukemia virus subgroup C cellular receptor 1##AK299208|ANGEL2|90806|angel homolog 2 (Drosophila)##AK294479|ANGEL2|90806|angel homolog 2 (Drosophila)##AK311276|ANGEL2|90806|angel homolog 2 (Drosophila)##AK299365|ANGEL2|90806|angel homolog 2 (Drosophila)##BC047469|ANGEL2|90806|angel homolog 2 (Drosophila)##AK295116|ANGEL2|90806|angel homolog 2 (Drosophila)##AF510741|ANGEL2|90806|angel homolog 2 (Drosophila)##AL079275|ANGEL2|90806|angel homolog 2 (Drosophila)##NM_144567|ANGEL2|90806|angel homolog 2 (Drosophila)##AK122989|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_001136138|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##NM_012424|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK299298|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AF477978|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK122921|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1##AK295053|RPS6KC1|26750|ribosomal protein S6 kinase, 52kDa, polypeptide 1	0.0	
chr15	90216470	90216578	reg1042147.p1	3.423	+	TSC_hg19_v1_chr15_-_90198681 BC042063 NM_198525	-17904	-	TSC_hg19_v1_chr15_+_90118742 GQ227787 NM_152259	-97746	+	CU689056 AY257182 AF193809 NM_016321 BC015461 AK298252 AK298641 AF081497 AK301640 AK313238 BC030965 AK290899 AK310222	-176729	-	TSC_hg19_v1_chr15_-_90222599 AB005293 BC031084 AK310907 NM_001145311 NM_002666	6085	-	BC101164 BC114384 AK297442 CR542046 CR542075 CU679445 DQ893368 DQ896686 DQ896687 DQ896688 EU176800 AK300978 BC009697 AF093668 AK313318 TSC_hg19_v1_chr15_-_90233984 AB015594 NM_003847 AK001415	17406	-	BC064626 NM_020212 AK304683 AK097525	17519	+	BC042063|KIF7|374654|kinesin family member 7##NM_198525|KIF7|374654|kinesin family member 7##GQ227787|C15orf42|90381|chromosome 15 open reading frame 42##NM_152259|C15orf42|90381|chromosome 15 open reading frame 42##AY257182|RHCG|51458|Rh family, C glycoprotein##AF193809|RHCG|51458|Rh family, C glycoprotein##NM_016321|RHCG|51458|Rh family, C glycoprotein##BC015461|RHCG|51458|Rh family, C glycoprotein##AK298252|RHCG|51458|Rh family, C glycoprotein##AK298641|RHCG|51458|Rh family, C glycoprotein##AF081497|RHCG|51458|Rh family, C glycoprotein##AK301640|RHCG|51458|Rh family, C glycoprotein##AK313238|RHCG|51458|Rh family, C glycoprotein##BC030965|RHCG|51458|Rh family, C glycoprotein##AK290899|RHCG|51458|Rh family, C glycoprotein##AK310222|RHCG|51458|Rh family, C glycoprotein##AB005293|PLIN1|5346|perilipin 1##BC031084|PLIN1|5346|perilipin 1##NM_001145311|PLIN1|5346|perilipin 1##NM_002666|PLIN1|5346|perilipin 1##BC101164|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC114384|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK297442|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##CR542046|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##CR542075|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ893368|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896686|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896687|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##DQ896688|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##EU176800|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK300978|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC009697|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AF093668|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK313318|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AB015594|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##NM_003847|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##AK001415|PEX11A|8800|peroxisomal biogenesis factor 11 alpha##BC064626|WDR93|56964|WD repeat domain 93##NM_020212|WDR93|56964|WD repeat domain 93##AK304683|WDR93|56964|WD repeat domain 93##AK097525|WDR93|56964|WD repeat domain 93	0.962268	CTCF.p2:19:0.962
chr17	78120876	78120984	reg1035972.p1	3.423	+	CR456750 CU678566 AB383751 X79538 BC003662 BC004386 BC011151 TSC_hg19_v1_chr17_-_78120947 AK290608 NM_014740	-60	-	TSC_hg19_v1_chr17_+_78075395 BC040431 BC065262 Y00839	-45460	+	AK299462 TSC_hg19_v1_chr17_+_78075368	-45566	+	AF322642 NM_024110 BC018142	31358	+	BC001326 NM_052819	40668	+	TSC_hg19_v1_chr17_-_78194133 CU690396 U30894 AB209900 BC047318 AK222890 AK291257 AK304706 AK309927 AK095969 NM_000199	73211	-	CR456750|EIF4A3|9775|eukaryotic translation initiation factor 4A3##X79538|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC003662|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC004386|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC011151|EIF4A3|9775|eukaryotic translation initiation factor 4A3##AK290608|EIF4A3|9775|eukaryotic translation initiation factor 4A3##NM_014740|EIF4A3|9775|eukaryotic translation initiation factor 4A3##BC040431|GAA|2548|glucosidase, alpha; acid##Y00839|GAA|2548|glucosidase, alpha; acid##AK299462|GAA|2548|glucosidase, alpha; acid##AF322642|CARD14|79092|caspase recruitment domain family, member 14##NM_024110|CARD14|79092|caspase recruitment domain family, member 14##BC018142|CARD14|79092|caspase recruitment domain family, member 14##BC001326|CARD14|79092|caspase recruitment domain family, member 14##NM_052819|CARD14|79092|caspase recruitment domain family, member 14##U30894|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AB209900|SGSH|6448|N-sulfoglucosamine sulfohydrolase##BC047318|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK222890|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK291257|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK304706|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK309927|SGSH|6448|N-sulfoglucosamine sulfohydrolase##AK095969|SGSH|6448|N-sulfoglucosamine sulfohydrolase##NM_000199|SGSH|6448|N-sulfoglucosamine sulfohydrolase	0.0	
chr3	23802586	23802692	reg1023792.p2	3.423	+	TSC_hg19_v1_chr3_+_23244727 AK057886 NM_152653 BC022332	-557884	+	TSC_hg19_v1_chr3_+_23244600 AK307075	-558056	+	AK310298 TSC_hg19_v1_chr3_-_22414124	-1388505	-	TSC_hg19_v1_chr3_+_23847445 NM_003341 NM_182666 BC009139	44771	+	AK314854 TSC_hg19_v1_chr3_+_23847474	44835	+	AK295354 NM_001202476	49294	+	AK057886|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##NM_152653|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##BC022332|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK307075|UBE2E2|7325|ubiquitin-conjugating enzyme E2E 2##AK310298|ZNF385D|79750|zinc finger protein 385D##NM_003341|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_182666|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##BC009139|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##AK314854|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1##NM_001202476|UBE2E1|7324|ubiquitin-conjugating enzyme E2E 1	0.0	
chr5	41520071	41520154	reg1039409.p2	3.423	+	AB464014 TSC_hg19_v1_chr5_-_41510701 AK127142 BX648329 NM_001005473	-9434	-	BC035723 NM_001115131	-258573	-	J05024 J04506 AK292509 TSC_hg19_v1_chr5_-_41213635 J05064 AK313673 NM_000065	-306523	-	AB528366 CR457049 CU679223 DQ891805 DQ894989 TSC_hg19_v1_chr5_-_41870488 AK312327	350362	-	TSC_hg19_v1_chr5_-_41870528 BC009001 U62961	350471	-	TSC_hg19_v1_chr5_-_41870706 NM_000436	350634	-	AK127142|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BX648329|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##NM_001005473|PLCXD3|345557|phosphatidylinositol-specific phospholipase C, X domain containing 3##BC035723|C6|729|complement component 6##NM_001115131|C6|729|complement component 6##J05024|C6|729|complement component 6##J04506|C6|729|complement component 6##AK292509|C6|729|complement component 6##J05064|C6|729|complement component 6##AK313673|C6|729|complement component 6##NM_000065|C6|729|complement component 6##CR457049|OXCT1|5019|3-oxoacid CoA transferase 1##DQ891805|OXCT1|5019|3-oxoacid CoA transferase 1##DQ894989|OXCT1|5019|3-oxoacid CoA transferase 1##AK312327|OXCT1|5019|3-oxoacid CoA transferase 1##BC009001|OXCT1|5019|3-oxoacid CoA transferase 1##U62961|OXCT1|5019|3-oxoacid CoA transferase 1##NM_000436|OXCT1|5019|3-oxoacid CoA transferase 1	0.195808	
chr5	67562555	67562622	reg1039729.p1	3.423	+	TSC_hg19_v1_chr5_+_67511602 BC094795	-50981	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	-51008	+	BC109069 BC109070 D83597 NM_005582 AK313177	-1069988	-	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	21706	+	NM_181504 AK223613 BC030815 U49349 CU689026 AK126345	23958	+	AK094785 NM_001242466 AK294919	25864	+	BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181504|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK223613|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC030815|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##U49349|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK126345|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK094785|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_001242466|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK294919|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.0	
chr6	218192	218372	reg1036765.p1	3.423	+	None	None	None	None	None	None	None	None	None	TSC_hg19_v1_chr6_+_292080 AY249859 BC022847 NM_020185	73803	+	AF424702 AK310653 TSC_hg19_v1_chr6_+_292526 AK296402 AF165519 DQ893393 DQ896715 AB528664 CU692732	74215	+	NM_001195286 NM_002460 U52682 TSC_hg19_v1_chr6_+_391751 AK310149 U63738 D78261 BC015752	173482	+	AY249859|DUSP22|56940|dual specificity phosphatase 22##BC022847|DUSP22|56940|dual specificity phosphatase 22##NM_020185|DUSP22|56940|dual specificity phosphatase 22##AF424702|DUSP22|56940|dual specificity phosphatase 22##AK310653|DUSP22|56940|dual specificity phosphatase 22##AK296402|DUSP22|56940|dual specificity phosphatase 22##AF165519|DUSP22|56940|dual specificity phosphatase 22##DQ893393|DUSP22|56940|dual specificity phosphatase 22##DQ896715|DUSP22|56940|dual specificity phosphatase 22##NM_001195286|IRF4|3662|interferon regulatory factor 4##NM_002460|IRF4|3662|interferon regulatory factor 4##U52682|IRF4|3662|interferon regulatory factor 4##AK310149|IRF4|3662|interferon regulatory factor 4##U63738|IRF4|3662|interferon regulatory factor 4##D78261|IRF4|3662|interferon regulatory factor 4##BC015752|IRF4|3662|interferon regulatory factor 4	0.035166	
chr8	56852676	56852820	reg1022510.p2	3.423	+	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-60228	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	-60353	+	TSC_hg19_v1_chr8_+_56792383 M16038 NM_001111097 NM_002350 BC126456 BC126458	-60383	+	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	134338	-	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	173792	-	TSC_hg19_v1_chr8_-_57123833 U65002	271087	-	AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M16038|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_001111097|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_002350|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126456|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126458|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1	0.0	
chr9	136820180	136820320	reg1039364.p2	3.423	+	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	-215264	-	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	-216772	-	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	-318742	+	BX640754 TSC_hg19_v1_chr9_-_136857447 AB587478 S76992 BC132965 BC132967 NM_001134398 NM_003371	37196	-	D26362 TSC_hg19_v1_chr9_-_136933121 BC010699 NM_007371	112943	-	TSC_hg19_v1_chr9_-_136933665 BC032124 AK299519	113376	-	BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BX640754|VAV2|7410|vav 2 guanine nucleotide exchange factor##S76992|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132965|VAV2|7410|vav 2 guanine nucleotide exchange factor##BC132967|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_001134398|VAV2|7410|vav 2 guanine nucleotide exchange factor##NM_003371|VAV2|7410|vav 2 guanine nucleotide exchange factor##D26362|BRD3|8019|bromodomain containing 3##BC010699|BRD3|8019|bromodomain containing 3##NM_007371|BRD3|8019|bromodomain containing 3##BC032124|BRD3|8019|bromodomain containing 3##AK299519|BRD3|8019|bromodomain containing 3	0.0	
chrX	142871475	142871554	reg1033933.p1	3.423	+	NM_001009615	-66999	-	TSC_hg19_v1_chrX_-_142723922 NM_001184749	-147591	-	TSC_hg19_v1_chrX_-_142722880 BC040986 NM_173078	-148571	-	GU727624 NM_001012989	95658	+	DQ336118 DQ336119 DQ336120 DQ336121 NM_001009614	1457592	+	TSC_hg19_v1_chrX_+_144899439 NM_001144003 NM_001144004 NM_001144005 NM_032539 AK096278 CR627412 AK289732	2027899	+	NM_001009615|SPANXN2|494119|SPANX family, member N2##NM_001184749|SLITRK4|139065|SLIT and NTRK-like family, member 4##BC040986|SLITRK4|139065|SLIT and NTRK-like family, member 4##NM_173078|SLITRK4|139065|SLIT and NTRK-like family, member 4##GU727624|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like##NM_001012989|UBE2NL|389898|ubiquitin-conjugating enzyme E2N-like##DQ336118|SPANXN1|494118|SPANX family, member N1##DQ336119|SPANXN1|494118|SPANX family, member N1##DQ336120|SPANXN1|494118|SPANX family, member N1##DQ336121|SPANXN1|494118|SPANX family, member N1##NM_001009614|SPANXN1|494118|SPANX family, member N1##NM_001144003|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144004|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_001144005|SLITRK2|84631|SLIT and NTRK-like family, member 2##NM_032539|SLITRK2|84631|SLIT and NTRK-like family, member 2##AK096278|SLITRK2|84631|SLIT and NTRK-like family, member 2##CR627412|SLITRK2|84631|SLIT and NTRK-like family, member 2##AK289732|SLITRK2|84631|SLIT and NTRK-like family, member 2	0.892768	CTCF.p2:9:0.893
chr10	110118876	110119006	reg1039416.p1	3.422	+	AB384862 AF284756 AY099452 AY099453 BC131597 EU281343 EU281344 AB209142 AK289797 AK125464 NM_001013031 NM_001206569 NM_001206570 NM_001206571 NM_001206572 NM_052918	-1194565	-	TSC_hg19_v1_chr10_-_108459000 AK123752	-1659882	-	BC117417 TSC_hg19_v1_chr10_+_106401047	-3717896	+	BC007579 AK304367 TSC_hg19_v1_chr10_-_111683217 AK289436 AL833411	1564268	-	TSC_hg19_v1_chr10_-_111683246 AK093693 NM_001167604 NM_020383	1564336	-	NM_019903 AB209810 BC057285	1646840	+	AF284756|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099452|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AY099453|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC131597|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281343|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##EU281344|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AB209142|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK289797|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK125464|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001013031|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206569|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206570|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206571|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_001206572|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##NM_052918|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##AK123752|SORCS1|114815|sortilin-related VPS10 domain containing receptor 1##BC117417|SORCS3|22986|sortilin-related VPS10 domain containing receptor 3##BC007579|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK304367|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK289436|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AL833411|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##AK093693|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_001167604|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_020383|XPNPEP1|7511|X-prolyl aminopeptidase (aminopeptidase P) 1, soluble##NM_019903|ADD3|120|adducin 3 (gamma)##AB209810|ADD3|120|adducin 3 (gamma)##BC057285|ADD3|120|adducin 3 (gamma)	0.118428	
chr10	112678808	112678875	reg1044179.p2	3.422	+	TSC_hg19_v1_chr10_-_112678704 AK307126 NM_001195306	-145	-	AK315295 TSC_hg19_v1_chr10_+_112631685 AK223623 AK296753 BC026104 BC031049 BC015036 U96628	-47127	+	NM_001199492 NM_014456 NM_145341 AK312540 TSC_hg19_v1_chr10_+_112631673	-47229	+	TSC_hg19_v1_chr10_-_112678952 BC062778 AK021501 BC104248 BC104249 BC113000 BC113001 AK025724 BC105804 AK307314 BC073157 NM_001195304 NM_001195305 NM_001195307 NM_001243783	171	-	TSC_hg19_v1_chr10_+_112679309 NM_007373	454	+	TSC_hg19_v1_chr10_+_112679361 AK292833 AK293271	519	+	AK307126|BBIP1|92482|BBSome interacting protein 1##NM_001195306|BBIP1|92482|BBSome interacting protein 1##AK315295|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK223623|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK296753|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC026104|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC031049|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC015036|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##U96628|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_001199492|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_014456|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##NM_145341|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##AK312540|PDCD4|27250|programmed cell death 4 (neoplastic transformation inhibitor)##BC062778|BBIP1|92482|BBSome interacting protein 1##AK021501|BBIP1|92482|BBSome interacting protein 1##BC104248|BBIP1|92482|BBSome interacting protein 1##BC104249|BBIP1|92482|BBSome interacting protein 1##BC113000|BBIP1|92482|BBSome interacting protein 1##BC113001|BBIP1|92482|BBSome interacting protein 1##AK025724|BBIP1|92482|BBSome interacting protein 1##BC105804|BBIP1|92482|BBSome interacting protein 1##AK307314|BBIP1|92482|BBSome interacting protein 1##BC073157|BBIP1|92482|BBSome interacting protein 1##NM_001195304|BBIP1|92482|BBSome interacting protein 1##NM_001195305|BBIP1|92482|BBSome interacting protein 1##NM_001195307|BBIP1|92482|BBSome interacting protein 1##NM_001243783|BBIP1|92482|BBSome interacting protein 1##NM_007373|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK292833|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)##AK293271|SHOC2|8036|soc-2 suppressor of clear homolog (C. elegans)	0.0	
chr10	76412684	76412792	reg1046065.p1	3.422	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-476151	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-476208	+	U50196 TSC_hg19_v1_chr10_+_75936520 AK290633 AK302706	-476256	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	173616	+	AY686755 NM_001003892 BC137321 BC137322	405567	-	AB027004 AB103375 NM_016364	446509	-	DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##U50196|ADK|132|adenosine kinase##AK290633|ADK|132|adenosine kinase##AK302706|ADK|132|adenosine kinase##AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr1	161531321	161531429	reg1038011.p1	3.422	+	NM_001127593 NM_001127595 NM_001127596	-10963	-	BC036723 NM_000569 NM_001127592 AK302126	-11521	-	CU676090 CU689692 AK223268 TSC_hg19_v1_chr1_-_161519555 BC033678 AK223295 X52645 AB528616 CU691394	-11796	-	NM_201563 AK308168 AK307162 BC137397 BC137423 X17652 U90938 U90939 U90940 U90941 CU689254	19802	+	NM_001244753	69876	-	NM_000570	70377	-	NM_001127593|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_001127595|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_001127596|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##BC036723|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_000569|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_001127592|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK302126|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK223268|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##BC033678|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##AK223295|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##X52645|FCGR3A|2214|Fc fragment of IgG, low affinity IIIa, receptor (CD16a)##NM_201563|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##AK308168|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##AK307162|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC137397|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##BC137423|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##X17652|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90938|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90939|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90940|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##U90941|FCGR2C|9103|Fc fragment of IgG, low affinity IIc, receptor for (CD32) (gene/pseudogene)##NM_001244753|FCGR3B|2215|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)##NM_000570|FCGR3B|2215|Fc fragment of IgG, low affinity IIIb, receptor (CD16b)	0.144659	
chr11	72887243	72887340	reg1036181.p2	3.422	+	AK296376 TSC_hg19_v1_chr11_-_72853112 AK297928 AB018312 NM_014824	-34242	-	BC142718 BC146660 TSC_hg19_v1_chr11_+_72525476 AK303270 AK091151 AX746810 AK093017 AX747859 BC108672	-361809	+	BC137489 BC137490 TSC_hg19_v1_chr11_+_72525455 BC069189 NM_033388 AK090597 AX746524	-361886	+	TSC_hg19_v1_chr11_+_72929328 BC012104 NM_002564 NM_176072	42053	+	TSC_hg19_v1_chr11_+_72929414 U07225 BC028135 NM_176071	42155	+	AK313942 TSC_hg19_v1_chr11_+_72929608	42325	+	AK296376|FCHSD2|9873|FCH and double SH3 domains 2##AK297928|FCHSD2|9873|FCH and double SH3 domains 2##AB018312|FCHSD2|9873|FCH and double SH3 domains 2##NM_014824|FCHSD2|9873|FCH and double SH3 domains 2##BC142718|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC146660|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK303270|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK091151|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK093017|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC108672|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137489|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC137490|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC069189|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##NM_033388|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##AK090597|ATG16L2|89849|ATG16 autophagy related 16-like 2 (S. cerevisiae)##BC012104|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_002564|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176072|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##U07225|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##BC028135|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##NM_176071|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2##AK313942|P2RY2|5029|purinergic receptor P2Y, G-protein coupled, 2	0.0	
chr1	185489620	185489686	reg1037457.p1	3.422	+	NM_006469 AB020657 TSC_hg19_v1_chr1_-_185286474	-203183	-	AK292431 TSC_hg19_v1_chr1_-_185286376 DQ443528 BC067739 AJ012449 AF161553 AF205218 AK023123	-203334	-	TSC_hg19_v1_chr1_+_185126418 AK291443	-363257	+	TSC_hg19_v1_chr1_+_185703522 BC139908 AF156100 NM_031935	213923	+	NM_001127708 NM_001127709 NM_001127710 NM_005807 AK301343 AK057197 AK297718 AK301487 AK308235	775754	+	TSC_hg19_v1_chr1_-_186344269 U69668 Y00672	854604	-	NM_006469|IVNS1ABP|10625|influenza virus NS1A binding protein##AB020657|IVNS1ABP|10625|influenza virus NS1A binding protein##AK292431|IVNS1ABP|10625|influenza virus NS1A binding protein##DQ443528|IVNS1ABP|10625|influenza virus NS1A binding protein##BC067739|IVNS1ABP|10625|influenza virus NS1A binding protein##AJ012449|IVNS1ABP|10625|influenza virus NS1A binding protein##AF161553|IVNS1ABP|10625|influenza virus NS1A binding protein##AF205218|IVNS1ABP|10625|influenza virus NS1A binding protein##AK023123|IVNS1ABP|10625|influenza virus NS1A binding protein##AK291443|SWT1|54823|SWT1 RNA endoribonuclease homolog (S. cerevisiae)##AF156100|HMCN1|83872|hemicentin 1##NM_031935|HMCN1|83872|hemicentin 1##NM_001127708|PRG4|10216|proteoglycan 4##NM_001127709|PRG4|10216|proteoglycan 4##NM_001127710|PRG4|10216|proteoglycan 4##NM_005807|PRG4|10216|proteoglycan 4##AK301343|PRG4|10216|proteoglycan 4##AK057197|PRG4|10216|proteoglycan 4##AK297718|PRG4|10216|proteoglycan 4##AK301487|PRG4|10216|proteoglycan 4##AK308235|PRG4|10216|proteoglycan 4##U69668|TPR|7175|translocated promoter region (to activated MET oncogene)##Y00672|TPR|7175|translocated promoter region (to activated MET oncogene)	0.0	
chr14	50504026	50504116	reg1038348.p2	3.422	+	AK091232 AX746864 NM_001012706	-29834	-	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-143665	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-144238	+	AF390030 NM_001014830	55289	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	79199	-	TSC_hg19_v1_chr14_-_50697940 L13858 HQ258542 AB463275 BC117261 BC143366 BC143367	193912	-	AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D##L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)##HQ258542|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)	0.0	
chr14	64970324	64970424	reg1039765.p2	3.422	+	AK315336 NM_004857 BC057229	-38114	+	TSC_hg19_v1_chr14_+_64855070 AK095514 AK312361 BC050420 AK309266 BC009806 J04031 AB384767 DQ893634 DQ896853	-115278	+	AK302747 NM_005956	-115621	+	TSC_hg19_v1_chr14_-_64970524 NM_006977 BC035804	69	-	TSC_hg19_v1_chr14_+_64971227 BX248777 NM_001123329 NM_014950	884	+	TSC_hg19_v1_chr14_+_64971443 AB023214	1069	+	AK315336|AKAP5|9495|A kinase (PRKA) anchor protein 5##NM_004857|AKAP5|9495|A kinase (PRKA) anchor protein 5##BC057229|AKAP5|9495|A kinase (PRKA) anchor protein 5##AK312361|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC050420|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK309266|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##BC009806|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##J04031|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ893634|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##DQ896853|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##AK302747|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_005956|MTHFD1|4522|methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1, methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthetase##NM_006977|ZBTB25|7597|zinc finger and BTB domain containing 25##BC035804|ZBTB25|7597|zinc finger and BTB domain containing 25##BX248777|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_001123329|ZBTB1|22890|zinc finger and BTB domain containing 1##NM_014950|ZBTB1|22890|zinc finger and BTB domain containing 1##AB023214|ZBTB1|22890|zinc finger and BTB domain containing 1	0.0	
chr15	101739960	101740089	reg1029370.p1	3.422	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-280512	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-280550	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-319953	+	AB071402 TSC_hg19_v1_chr15_-_101791795	51712	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	52111	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	77639	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.0	
chr1	64239574	64239678	reg1042399.p1	3.422	+	NM_001172818 AK300100	-150733	+	AK293298 NM_001172819 AK298505	-180112	+	TSC_hg19_v1_chr1_+_64059081 AK294186 BC019920 NM_002633 BC001756 BC067763 AK312254 M83088 BC090856 DQ890618 DQ893786 CU676478 BT006961	-180601	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	33	+	BC029895 NM_152489	429863	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	696892	+	NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##AK294186|PGM1|5236|phosphoglucomutase 1##BC019920|PGM1|5236|phosphoglucomutase 1##NM_002633|PGM1|5236|phosphoglucomutase 1##BC001756|PGM1|5236|phosphoglucomutase 1##BC067763|PGM1|5236|phosphoglucomutase 1##AK312254|PGM1|5236|phosphoglucomutase 1##M83088|PGM1|5236|phosphoglucomutase 1##BC090856|PGM1|5236|phosphoglucomutase 1##DQ890618|PGM1|5236|phosphoglucomutase 1##DQ893786|PGM1|5236|phosphoglucomutase 1##BT006961|PGM1|5236|phosphoglucomutase 1##AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_020925|CACHD1|57685|cache domain containing 1	0.479933	CTCF.p2:-20:0.480
chr18	13614368	13614454	reg1031341.p2	3.422	+	NM_001003674 NM_001003675	-2747	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-395626	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-623066	+	AF009426 AF009427 NM_004338 NM_181483	6455	+	TSC_hg19_v1_chr18_-_13726549 AK055618	112095	-	TSC_hg19_v1_chr18_-_13726582 AK309506 NM_001098801 NM_152352	112175	-	NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A##AK309506|FAM210A|125228|family with sequence similarity 210, member A##NM_001098801|FAM210A|125228|family with sequence similarity 210, member A##NM_152352|FAM210A|125228|family with sequence similarity 210, member A	0.655276	CTCF.p2:-15:0.655
chr2	125796582	125796722	reg1045080.p1	3.422	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-1013788	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-3283415	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-3302187	-	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	1617055	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	1617140	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	2068089	-	AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1	0.0	
chr2	194347467	194347567	reg1033714.p1	3.422	+	BC008973 AB017269 AY358907 AK074632 AL157430 AF179274 NM_016192 TSC_hg19_v1_chr2_-_193059657 AF242222 AK222691 AK315376	-1287888	-	CR457390 DQ133599 AK074507 AB004064 TSC_hg19_v1_chr2_-_193059378	-1288203	-	TSC_hg19_v1_chr2_-_192711934 AK290378 NM_004657	-1635546	-	BC029413 NM_001127257 CR749813	2174058	+	NM_020342 TSC_hg19_v1_chr2_+_196521958 AK294771 AB033091 AK291241 BC101516 BC112223 BC010371 AL050294	2174391	+	AB463018 AF327442 AK094515 NM_018897 AB023161	2585978	-	BC008973|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB017269|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AY358907|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074632|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AL157430|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF179274|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##NM_016192|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AF242222|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK222691|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK315376|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##CR457390|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##DQ133599|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK074507|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AB004064|TMEFF2|23671|transmembrane protein with EGF-like and two follistatin-like domains 2##AK290378|SDPR|8436|serum deprivation response##NM_004657|SDPR|8436|serum deprivation response##BC029413|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_001127257|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##CR749813|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##NM_020342|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK294771|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AB033091|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AK291241|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC101516|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC112223|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##BC010371|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AL050294|SLC39A10|57181|solute carrier family 39 (zinc transporter), member 10##AF327442|DNAH7|56171|dynein, axonemal, heavy chain 7##AK094515|DNAH7|56171|dynein, axonemal, heavy chain 7##NM_018897|DNAH7|56171|dynein, axonemal, heavy chain 7##AB023161|DNAH7|56171|dynein, axonemal, heavy chain 7	0.0	
chr2	19887062	19887211	reg1032935.p1	3.422	+	BC025712 NM_145260 TSC_hg19_v1_chr2_-_19558385 AK074591	-328757	-	AF356185 BC141842 AK302200 BC136387 BC171761 AF417165 BC026076 AK302084 AK057444 AK302795 AK307653 AK097422 AK093464 AX748142 NM_001002006 NM_001199086 NM_001199087 NM_001199088 NM_001199103 NM_001199104 NM_033253	-1116326	-	AB527206 AM393225 BC009830 AY358511 AF237952 TSC_hg19_v1_chr2_-_18741920 AK314994 NM_020905	-1145220	-	AK022396 BC068572 TSC_hg19_v1_chr2_+_20068650 AK097927	181499	+	TSC_hg19_v1_chr2_-_20101456 BC050088	214292	-	CU691276 BC070381 TSC_hg19_v1_chr2_-_20101717 BC057850 NM_001008237	214545	-	BC025712|OSR1|130497|odd-skipped related 1 (Drosophila)##NM_145260|OSR1|130497|odd-skipped related 1 (Drosophila)##AK074591|OSR1|130497|odd-skipped related 1 (Drosophila)##AF356185|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC141842|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302200|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC136387|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC171761|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AF417165|NT5C1B|93034|5'-nucleotidase, cytosolic IB##BC026076|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK302084|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK057444|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK302795|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK307653|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##AK097422|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AK093464|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001002006|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199086|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199087|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199088|NT5C1B|93034|5'-nucleotidase, cytosolic IB##NM_001199103|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_001199104|NT5C1B-RDH14|100526794|NT5C1B-RDH14 readthrough##NM_033253|NT5C1B|93034|5'-nucleotidase, cytosolic IB##AM393225|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##BC009830|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AY358511|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AF237952|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK314994|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##NM_020905|RDH14|57665|retinol dehydrogenase 14 (all-trans/9-cis/11-cis)##AK022396|FLJ12334|400946|uncharacterized LOC400946##BC068572|FLJ12334|400946|uncharacterized LOC400946##AK097927|FLJ12334|400946|uncharacterized LOC400946##BC070381|TTC32|130502|tetratricopeptide repeat domain 32##BC057850|TTC32|130502|tetratricopeptide repeat domain 32##NM_001008237|TTC32|130502|tetratricopeptide repeat domain 32	0.079702	
chr2	242642091	242642196	reg1034665.p1	3.422	+	TSC_hg19_v1_chr2_+_242641311 AK289958 AK074422 NM_032329 AK300790 BC005370 BC071899 AF189286 AB527747 CU675145 CU687190 EU832330 EU832415	-748	+	AB593140 TSC_hg19_v1_chr2_+_242626482	-15667	+	TSC_hg19_v1_chr2_-_242626231 AK223434 BC147006 BC147010 BC171894 BC171902 BC171903 NM_001165031 NM_012145	-15840	-	TSC_hg19_v1_chr2_+_242674044 AK304764 AK094149 BC071598 NM_152783 AK091725 AK304773 AX747146 BC036604	31898	+	AB040610 NM_022134 BC117293 BC117295	74137	+	NM_001167600 NM_001167601 TSC_hg19_v1_chr2_+_242750226	108053	+	AK289958|ING5|84289|inhibitor of growth family, member 5##AK074422|ING5|84289|inhibitor of growth family, member 5##NM_032329|ING5|84289|inhibitor of growth family, member 5##BC005370|ING5|84289|inhibitor of growth family, member 5##BC071899|ING5|84289|inhibitor of growth family, member 5##AF189286|ING5|84289|inhibitor of growth family, member 5##AK223434|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC147006|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC147010|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171894|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171902|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171903|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##NM_001165031|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##NM_012145|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##AK304764|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK094149|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##BC071598|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##NM_152783|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK091725|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK304773|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##BC036604|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AB040610|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##NM_022134|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##BC117293|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##BC117295|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##NM_001167600|NEU4|129807|sialidase 4##NM_001167601|NEU4|129807|sialidase 4	0.071805	
chr2	677349	677475	reg1032448.p1	3.422	+	TSC_hg19_v1_chr2_-_677406 BC016010 AL137269 NM_152834	-1	-	BC033490 NM_001002919	-389168	-	TSC_hg19_v1_chr2_+_264946 NM_001040649 NM_004300 NM_007099 AK289934 M83653 BC020699 AK291861 BC007422 AB209838 BC106011 AB385551 BT007136 Y16846 M83654 M87546 S62885	-412500	+	TSC_hg19_v1_chr2_+_946534 BC035783 NM_018968 AJ003029 BC125251	269167	+	BC063107 NM_000547 NM_001206744 NM_001206745 NM_175719 BC095448 M17755 J02969 J02970 X17358 Y00406	739843	+	NM_175721 NM_175722 AF439430 CU687644	740767	+	BC016010|TMEM18|129787|transmembrane protein 18##AL137269|TMEM18|129787|transmembrane protein 18##NM_152834|TMEM18|129787|transmembrane protein 18##BC033490|FAM150B|285016|family with sequence similarity 150, member B##NM_001002919|FAM150B|285016|family with sequence similarity 150, member B##NM_001040649|ACP1|52|acid phosphatase 1, soluble##NM_004300|ACP1|52|acid phosphatase 1, soluble##NM_007099|ACP1|52|acid phosphatase 1, soluble##AK289934|ACP1|52|acid phosphatase 1, soluble##M83653|ACP1|52|acid phosphatase 1, soluble##BC020699|ACP1|52|acid phosphatase 1, soluble##AK291861|ACP1|52|acid phosphatase 1, soluble##BC007422|ACP1|52|acid phosphatase 1, soluble##AB209838|ACP1|52|acid phosphatase 1, soluble##BC106011|ACP1|52|acid phosphatase 1, soluble##BT007136|ACP1|52|acid phosphatase 1, soluble##Y16846|ACP1|52|acid phosphatase 1, soluble##M83654|ACP1|52|acid phosphatase 1, soluble##M87546|ACP1|52|acid phosphatase 1, soluble##S62885|ACP1|52|acid phosphatase 1, soluble##BC035783|SNTG2|54221|syntrophin, gamma 2##NM_018968|SNTG2|54221|syntrophin, gamma 2##AJ003029|SNTG2|54221|syntrophin, gamma 2##BC125251|SNTG2|54221|syntrophin, gamma 2##BC063107|TPO|7173|thyroid peroxidase##NM_000547|TPO|7173|thyroid peroxidase##NM_001206744|TPO|7173|thyroid peroxidase##NM_001206745|TPO|7173|thyroid peroxidase##NM_175719|TPO|7173|thyroid peroxidase##BC095448|TPO|7173|thyroid peroxidase##M17755|TPO|7173|thyroid peroxidase##J02969|TPO|7173|thyroid peroxidase##J02970|TPO|7173|thyroid peroxidase##X17358|TPO|7173|thyroid peroxidase##Y00406|TPO|7173|thyroid peroxidase##NM_175721|TPO|7173|thyroid peroxidase##NM_175722|TPO|7173|thyroid peroxidase##AF439430|TPO|7173|thyroid peroxidase	0.166747	
chr2	99099796	99099977	reg1029432.p2	3.422	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-38528	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-136981	+	DQ426863 NM_001079878 NM_001298 DQ067460	-137253	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	125056	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	125164	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	125184	+	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)	0.0	
chr4	139314297	139314426	reg1032624.p2	3.422	+	AB385133 AJ277882 AB040875 BC012087 AK314855 AF252872 AB026891 AF200708 TSC_hg19_v1_chr4_-_139163504 AK290359 NM_014331	-150997	-	AB046782 NM_019035 TSC_hg19_v1_chr4_-_138453642 AK298607 BC071581 BX647786	-860719	-	AK297122 BC022227 TSC_hg19_v1_chr4_-_138453618	-860769	-	TSC_hg19_v1_chr4_+_139936938 AF183961 NM_012118 BC021963 BC023512 BC077723 BC113494 BC113500	622632	+	CU688002 CU689992 DQ890870 DQ894026 TSC_hg19_v1_chr4_-_140005382 AK301307 AF256223	691042	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	691250	-	AJ277882|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB040875|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##BC012087|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK314855|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF252872|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB026891|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AF200708|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AK290359|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##NM_014331|SLC7A11|23657|solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11##AB046782|PCDH18|54510|protocadherin 18##NM_019035|PCDH18|54510|protocadherin 18##AK298607|PCDH18|54510|protocadherin 18##BC071581|PCDH18|54510|protocadherin 18##BX647786|PCDH18|54510|protocadherin 18##AK297122|PCDH18|54510|protocadherin 18##BC022227|PCDH18|54510|protocadherin 18##AF183961|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##NM_012118|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC021963|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC023512|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC077723|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113494|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##BC113500|CCRN4L|25819|CCR4 carbon catabolite repression 4-like (S. cerevisiae)##DQ890870|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ894026|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK301307|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AF256223|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)	0.0	
chr4	185268486	185268667	reg1029183.p1	3.422	+	BC035035 AY358676 AK057370 NM_153343	-129511	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-440665	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-440756	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	127105	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	302025	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	302257	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.013947	
chr4	185655374	185655476	reg1031910.p1	3.422	+	DQ907910 DQ907911 TSC_hg19_v1_chr4_-_185655244 BC067802 AK292297 BC141854 AF469667 BC131556 NM_024629	-172	-	TSC_hg19_v1_chr4_+_185570923 BC064600 AK307317	-84496	+	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	-84592	+	TSC_hg19_v1_chr4_-_185726866 AK296826	71478	-	TSC_hg19_v1_chr4_-_185747123 L09229 AK292798	91676	-	TSC_hg19_v1_chr4_-_185747201 AK303486 NM_001995	91809	-	DQ907910|MLF1IP|79682|MLF1 interacting protein##DQ907911|MLF1IP|79682|MLF1 interacting protein##BC067802|MLF1IP|79682|MLF1 interacting protein##AK292297|MLF1IP|79682|MLF1 interacting protein##BC141854|MLF1IP|79682|MLF1 interacting protein##AF469667|MLF1IP|79682|MLF1 interacting protein##BC131556|MLF1IP|79682|MLF1 interacting protein##NM_024629|MLF1IP|79682|MLF1 interacting protein##BC064600|CCDC111|201973|coiled-coil domain containing 111##AK307317|CCDC111|201973|coiled-coil domain containing 111##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111##AK296826|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##L09229|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK292798|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##AK303486|ACSL1|2180|acyl-CoA synthetase long-chain family member 1##NM_001995|ACSL1|2180|acyl-CoA synthetase long-chain family member 1	0.0	
chr5	124078011	124078090	reg1036317.p2	3.422	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1230168	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1318906	-	NM_001136239 AK297992 AF272898 AF272899	-1653206	+	BC131507 AB033107 BC151226 NM_020747	2738	-	NM_001146319 AK316288 AK300154	1617764	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1680793	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.0	
chr5	68462826	68462910	reg1041174.p1	3.422	+	TSC_hg19_v1_chr5_+_68389916 BC000808 BC130452 BC130454 BC144349 AB527379 AY089991 BX537394 EU831923 EU832017	-72869	+	AK292925 TSC_hg19_v1_chr5_+_68389913	-72955	+	TSC_hg19_v1_chr5_+_68389892 AY358505 AF461760	-72986	+	NM_031966 TSC_hg19_v1_chr5_+_68462937	22	+	AK289431 TSC_hg19_v1_chr5_+_68462976	96	+	TSC_hg19_v1_chr5_+_68463001 BC006510 M25753 AB590575 DQ892975 BT020128	169	+	BC000808|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC130452|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC130454|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BC144349|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY089991|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##BX537394|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##EU831923|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##EU832017|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AK292925|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AY358505|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##AF461760|SLC30A5|64924|solute carrier family 30 (zinc transporter), member 5##NM_031966|CCNB1|891|cyclin B1##AK289431|CCNB1|891|cyclin B1##BC006510|CCNB1|891|cyclin B1##M25753|CCNB1|891|cyclin B1##DQ892975|CCNB1|891|cyclin B1##BT020128|CCNB1|891|cyclin B1	0.0	
chr5	75937358	75937482	reg1011323.p1	3.422	+	BC095499 AB464500 AK312848 BC093648 BC093650 U92971 AK298585 BX537386 NM_004101	-18275	-	TSC_hg19_v1_chr5_+_75699106 AK291066 NM_006633 U51903	-238304	+	AK094917 BC100824 BC100825 BC100826 BC100827 NM_014979	-558149	+	TSC_hg19_v1_chr5_+_76011924 AK308169 NM_001992 AK297131 M62424 AK314202 BC051909 BC002464 BC016059 BT007279 CU677972 DQ895099 EU176315	74536	+	NM_005242 BC018130 TSC_hg19_v1_chr5_+_76114854 U34038	177432	+	TSC_hg19_v1_chr5_+_76114883 BC012453 AY336105 BT009856 CU676194 CU680330 DQ890966 DQ894139	177524	+	BC095499|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK312848|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093648|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BC093650|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##U92971|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##BX537386|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##NM_004101|F2RL2|2151|coagulation factor II (thrombin) receptor-like 2##AK291066|IQGAP2|10788|IQ motif containing GTPase activating protein 2##NM_006633|IQGAP2|10788|IQ motif containing GTPase activating protein 2##U51903|IQGAP2|10788|IQ motif containing GTPase activating protein 2##AK094917|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100824|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100825|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100826|SV2C|22987|synaptic vesicle glycoprotein 2C##BC100827|SV2C|22987|synaptic vesicle glycoprotein 2C##NM_014979|SV2C|22987|synaptic vesicle glycoprotein 2C##AK308169|F2R|2149|coagulation factor II (thrombin) receptor##NM_001992|F2R|2149|coagulation factor II (thrombin) receptor##AK297131|F2R|2149|coagulation factor II (thrombin) receptor##M62424|F2R|2149|coagulation factor II (thrombin) receptor##AK314202|F2R|2149|coagulation factor II (thrombin) receptor##BC051909|F2R|2149|coagulation factor II (thrombin) receptor##BC002464|F2R|2149|coagulation factor II (thrombin) receptor##BC016059|F2R|2149|coagulation factor II (thrombin) receptor##BT007279|F2R|2149|coagulation factor II (thrombin) receptor##DQ895099|F2R|2149|coagulation factor II (thrombin) receptor##EU176315|F2R|2149|coagulation factor II (thrombin) receptor##NM_005242|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC018130|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##U34038|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BC012453|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##AY336105|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##BT009856|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ890966|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1##DQ894139|F2RL1|2150|coagulation factor II (thrombin) receptor-like 1	0.0	
chr6	117869015	117869156	reg1038816.p2	3.422	+	TSC_hg19_v1_chr6_+_117803805 BC035671 NM_173674 AK095973	-65248	+	M34353 NM_002944 TSC_hg19_v1_chr6_-_117747031	-122054	-	AY056583 NM_153453 TSC_hg19_v1_chr6_+_117586720 AJ578053 NM_182645 BC100798 BC100799 BC118545 BC118622 BC069316 AK096878	-282274	+	CU679397 TSC_hg19_v1_chr6_-_117923611 AF287894	54446	-	TSC_hg19_v1_chr6_-_117923643 BC009553 AY033606 AB209385	54548	-	TSC_hg19_v1_chr6_-_117923675 AK314486	54588	-	BC035671|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##NM_173674|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##AK095973|DCBLD1|285761|discoidin, CUB and LCCL domain containing 1##M34353|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##NM_002944|ROS1|6098|c-ros oncogene 1 , receptor tyrosine kinase##AY056583|VGLL2|245806|vestigial like 2 (Drosophila)##NM_153453|VGLL2|245806|vestigial like 2 (Drosophila)##AJ578053|VGLL2|245806|vestigial like 2 (Drosophila)##NM_182645|VGLL2|245806|vestigial like 2 (Drosophila)##BC100798|VGLL2|245806|vestigial like 2 (Drosophila)##BC100799|VGLL2|245806|vestigial like 2 (Drosophila)##BC118545|VGLL2|245806|vestigial like 2 (Drosophila)##BC118622|VGLL2|245806|vestigial like 2 (Drosophila)##BC069316|VGLL2|245806|vestigial like 2 (Drosophila)##AK096878|VGLL2|245806|vestigial like 2 (Drosophila)##AF287894|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##BC009553|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AY033606|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AB209385|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing##AK314486|GOPC|57120|golgi-associated PDZ and coiled-coil motif containing	0.564748	CTCF.p2:40:0.565
chr7	132079215	132079307	reg1045220.p1	3.422	+	TSC_hg19_v1_chr7_-_131833385 AL834504	-245866	-	BC042466 TSC_hg19_v1_chr7_-_131241369 U97519 AK223573 AK055816 NM_001018111 NM_005397	-837898	-	TSC_hg19_v1_chr7_+_131012652 BC067825 AF047489 AK310452 AK002024	-1066622	+	AL137352 AY358850 TSC_hg19_v1_chr7_-_132193002	113659	-	AK123428 TSC_hg19_v1_chr7_-_132261230	181969	-	TSC_hg19_v1_chr7_-_132261268 NM_001105543 NM_020911	182034	-	AL834504|PLXNA4|91584|plexin A4##BC042466|PODXL|5420|podocalyxin-like##U97519|PODXL|5420|podocalyxin-like##AK223573|PODXL|5420|podocalyxin-like##AK055816|PODXL|5420|podocalyxin-like##NM_001018111|PODXL|5420|podocalyxin-like##NM_005397|PODXL|5420|podocalyxin-like##BC067825|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AF047489|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK310452|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AK002024|MKLN1|4289|muskelin 1, intracellular mediator containing kelch motifs##AL137352|PLXNA4|91584|plexin A4##AY358850|PLXNA4|91584|plexin A4##AK123428|PLXNA4|91584|plexin A4##NM_001105543|PLXNA4|91584|plexin A4##NM_020911|PLXNA4|91584|plexin A4	0.0	
chr9	139422769	139422835	reg1037115.p1	3.422	+	TSC_hg19_v1_chr9_-_139378220 AB593115	-44560	-	BC036221 NM_152571 AK055336	-44832	+	TSC_hg19_v1_chr9_-_139377505 AB002308 NM_014866	-45298	-	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	17448	-	NM_016215 AL512735 AY358903 BC088371 AY358902	134599	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	137413	+	AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##AB002308|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##NM_014866|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7	0.642829	CTCF.p2:2:0.544
chrX	109154515	109154603	reg1021796.p2	3.422	+	TSC_hg19_v1_chrX_-_108976528 AB061713 AK292070 AF030555 NM_004458 NM_022977	-177995	-	TSC_hg19_v1_chrX_-_108976464 Y12777 Y13058 AB061714 BC034959 AK307566 AK294915	-178080	-	DQ891287 DQ894471 DQ896649 DQ896656 DQ896659 DQ896664 EF535525 BC035330 AJ012743 NM_012282 AK223306 AK314923 DQ192294 TSC_hg19_v1_chrX_-_108868398	-286235	-	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	91311	+	TSC_hg19_v1_chrX_+_109246341 NM_032227 AK026332	91781	+	TSC_hg19_v1_chrX_+_109246360 BC085605	91796	+	AB061713|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK292070|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AF030555|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_004458|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_022977|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y12777|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y13058|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061714|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##BC034959|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK307566|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK294915|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##DQ891287|KCNE1L|23630|KCNE1-like##DQ894471|KCNE1L|23630|KCNE1-like##DQ896649|KCNE1L|23630|KCNE1-like##DQ896656|KCNE1L|23630|KCNE1-like##DQ896659|KCNE1L|23630|KCNE1-like##DQ896664|KCNE1L|23630|KCNE1-like##EF535525|KCNE1L|23630|KCNE1-like##BC035330|KCNE1L|23630|KCNE1-like##AJ012743|KCNE1L|23630|KCNE1-like##NM_012282|KCNE1L|23630|KCNE1-like##AK223306|KCNE1L|23630|KCNE1-like##AK314923|KCNE1L|23630|KCNE1-like##DQ192294|KCNE1L|23630|KCNE1-like##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164##NM_032227|TMEM164|84187|transmembrane protein 164##AK026332|TMEM164|84187|transmembrane protein 164##BC085605|TMEM164|84187|transmembrane protein 164	0.237698	
chrX	7160739	7160920	reg1030263.p1	3.422	+	NM_000351 M16505 J04964 AK314034	-23328	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	-94637	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	-94878	+	AF167081 NM_013452	649473	+	AK289888 U03886 NM_004650 BC020746	734621	-	AK304586 TSC_hg19_v1_chrX_-_7895766 NM_001142389 NM_001172672	734942	-	NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##AF167081|VCX|26609|variable charge, X-linked##NM_013452|VCX|26609|variable charge, X-linked##AK289888|PNPLA4|8228|patatin-like phospholipase domain containing 4##U03886|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_004650|PNPLA4|8228|patatin-like phospholipase domain containing 4##BC020746|PNPLA4|8228|patatin-like phospholipase domain containing 4##AK304586|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001142389|PNPLA4|8228|patatin-like phospholipase domain containing 4##NM_001172672|PNPLA4|8228|patatin-like phospholipase domain containing 4	0.0	
chr11	121238348	121238511	reg1030764.p2	3.421	+	TSC_hg19_v1_chr11_+_121163523 BC050427 NM_001024956 BC012333	-74875	+	TSC_hg19_v1_chr11_+_121163484 AK096847 AK223141 AK222686	-74947	+	TSC_hg19_v1_chr11_+_121163397 NM_006918 AK312634	-75024	+	TSC_hg19_v1_chr11_+_121323026 NM_003105 Y08110 BC137171 AB463277	84520	+	TSC_hg19_v1_chr11_+_121323112 AK309523	84746	+	TSC_hg19_v1_chr11_+_121461071 AK294404	222669	+	BC050427|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_001024956|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##BC012333|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK096847|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK223141|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK222686|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_006918|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##AK312634|SC5DL|6309|sterol-C5-desaturase (ERG3 delta-5-desaturase homolog, S. cerevisiae)-like##NM_003105|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##Y08110|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##BC137171|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK309523|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing##AK294404|SORL1|6653|sortilin-related receptor, L(DLR class) A repeats containing	0.0	
chr11	86650547	86650674	reg1004978.p2	3.421	+	NM_007173 TSC_hg19_v1_chr11_+_86511583 AK316508 AK075362 AK315562 AK304301 AK304054 BC063022 AL136914 BC001278 AF015287 AF193611 AY359033	-139058	+	TSC_hg19_v1_chr11_-_86383659 AK300974 NM_001161586	-266945	-	X79440 TSC_hg19_v1_chr11_-_86383470 NM_006680 AK313695	-267168	-	TSC_hg19_v1_chr11_-_86666094 AY462097	15497	-	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	15778	-	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	98368	+	NM_007173|PRSS23|11098|protease, serine, 23##AK075362|PRSS23|11098|protease, serine, 23##AK315562|PRSS23|11098|protease, serine, 23##AK304301|PRSS23|11098|protease, serine, 23##AK304054|PRSS23|11098|protease, serine, 23##AL136914|PRSS23|11098|protease, serine, 23##BC001278|PRSS23|11098|protease, serine, 23##AF015287|PRSS23|11098|protease, serine, 23##AF193611|PRSS23|11098|protease, serine, 23##AY359033|PRSS23|11098|protease, serine, 23##AK300974|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_001161586|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##X79440|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##NM_006680|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AK313695|ME3|10873|malic enzyme 3, NADP(+)-dependent, mitochondrial##AY462097|FZD4|8322|frizzled family receptor 4##BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135	0.0	
chr13	110760622	110760792	reg1012449.p1	3.421	+	TSC_hg19_v1_chr13_-_110438921 NM_003749 AF073310	-321799	-	AB290159 AK127806 NM_001198950	-1479138	+	AB020672 BC146791 NM_015011 AL834447	-1512193	+	M10941 X03963 TSC_hg19_v1_chr13_-_110802760	42028	-	TSC_hg19_v1_chr13_-_110959505 BC142626 BC151220 AB209646 NM_001845 X05561	198802	-	TSC_hg19_v1_chr13_+_110959631 AK294920 NM_001846 X05562	198914	+	NM_003749|IRS2|8660|insulin receptor substrate 2##AF073310|IRS2|8660|insulin receptor substrate 2##AB290159|MYO16|23026|myosin XVI##AK127806|MYO16|23026|myosin XVI##NM_001198950|MYO16|23026|myosin XVI##AB020672|MYO16|23026|myosin XVI##BC146791|MYO16|23026|myosin XVI##NM_015011|MYO16|23026|myosin XVI##AL834447|MYO16|23026|myosin XVI##M10941|COL4A1|1282|collagen, type IV, alpha 1##X03963|COL4A1|1282|collagen, type IV, alpha 1##BC142626|COL4A1|1282|collagen, type IV, alpha 1##BC151220|COL4A1|1282|collagen, type IV, alpha 1##AB209646|COL4A1|1282|collagen, type IV, alpha 1##NM_001845|COL4A1|1282|collagen, type IV, alpha 1##X05561|COL4A1|1282|collagen, type IV, alpha 1##AK294920|COL4A2|1284|collagen, type IV, alpha 2##NM_001846|COL4A2|1284|collagen, type IV, alpha 2##X05562|COL4A2|1284|collagen, type IV, alpha 2	0.0	
chr15	96900452	96900586	reg1014415.p2	3.421	+	NM_001145157	-23951	+	AK316086 NM_001145156	-24726	+	TSC_hg19_v1_chr15_+_96873991 BC042897 M62760 NM_021005	-26542	+	TSC_hg19_v1_chr15_+_97326664 AY489187 NM_173499 BC066292 BC033979 BC112390	426153	+	TSC_hg19_v1_chr15_+_98503932 AK290221 NM_183376	1603400	+	TSC_hg19_v1_chr15_+_98503952 BC028704 BC070100	1603432	+	NM_001145157|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AK316086|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_001145156|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##BC042897|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##M62760|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##NM_021005|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##AY489187|SPATA8|145946|spermatogenesis associated 8##NM_173499|SPATA8|145946|spermatogenesis associated 8##BC066292|SPATA8|145946|spermatogenesis associated 8##BC033979|SPATA8|145946|spermatogenesis associated 8##BC112390|SPATA8|145946|spermatogenesis associated 8##AK290221|ARRDC4|91947|arrestin domain containing 4##NM_183376|ARRDC4|91947|arrestin domain containing 4##BC028704|ARRDC4|91947|arrestin domain containing 4##BC070100|ARRDC4|91947|arrestin domain containing 4	0.0	
chr1	64629796	64629895	reg1032379.p1	3.421	+	TSC_hg19_v1_chr1_+_64239705 AK308088 BC080541 NM_001083592 NM_005012 BC006374 M97675	-390186	+	NM_001172818 AK300100	-540952	+	AK293298 NM_001172819 AK298505	-570331	+	BC029895 NM_152489	39644	+	NM_020925 TSC_hg19_v1_chr1_+_64936560	306673	+	TSC_hg19_v1_chr1_+_65210850 AB046799 NM_018211 AB463230	580954	+	AK308088|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC080541|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001083592|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_005012|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##BC006374|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##M97675|ROR1|4919|receptor tyrosine kinase-like orphan receptor 1##NM_001172818|PGM1|5236|phosphoglucomutase 1##AK300100|PGM1|5236|phosphoglucomutase 1##AK293298|PGM1|5236|phosphoglucomutase 1##NM_001172819|PGM1|5236|phosphoglucomutase 1##AK298505|PGM1|5236|phosphoglucomutase 1##BC029895|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_152489|UBE2U|148581|ubiquitin-conjugating enzyme E2U (putative)##NM_020925|CACHD1|57685|cache domain containing 1##AB046799|RAVER2|55225|ribonucleoprotein, PTB-binding 2##NM_018211|RAVER2|55225|ribonucleoprotein, PTB-binding 2	0.10042	
chr17	18428510	18428601	reg1035253.p1	3.421	+	AK296659 NM_001040078 AK315818 BC073889 BC105943 TSC_hg19_v1_chr17_+_18380141 CU687266	-48423	+	BC036791 NM_001145127 AK298286 BC026998	-147468	+	TSC_hg19_v1_chr17_-_18266810 BC007979 BC022874 BC038598 AK223552 AK298415 AK302834 AF017065 NM_004169 NM_148918	-161771	-	BC101585 BC104815 BC143561 TSC_hg19_v1_chr17_-_18528914 BC062767 BX647826 AK093811 AX748319	100352	-	NM_001039397	119184	-	NM_001145045	157016	-	AK296659|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##NM_001040078|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##AK315818|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC073889|LGALS9C|654346|lectin, galactoside-binding, soluble, 9C##BC105943|LGALS9B|284194|lectin, galactoside-binding, soluble, 9B##BC036791|EVPLL|645027|envoplakin-like##NM_001145127|EVPLL|645027|envoplakin-like##AK298286|EVPLL|645027|envoplakin-like##BC026998|EVPLL|645027|envoplakin-like##BC007979|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC022874|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC038598|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK223552|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK298415|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AK302834|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##AF017065|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_004169|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##NM_148918|SHMT1|6470|serine hydroxymethyltransferase 1 (soluble)##BC101585|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC104815|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC143561|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BC062767|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##BX647826|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##AK093811|CCDC144B|284047|coiled-coil domain containing 144B (pseudogene)##NM_001039397|TBC1D28|254272|TBC1 domain family, member 28##NM_001145045|ZNF286B|729288|zinc finger protein 286B	0.500791	CTCF.p2:-2:0.488
chr17	57243388	57243520	reg1035933.p1	3.421	+	AK225380 TSC_hg19_v1_chr17_+_57233106 AK001891 AK225377 FJ161961 BC008669	-10334	+	NM_018304	-10595	+	NM_001100595 NM_182620	-10655	-	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	43943	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	54444	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	165564	+	AK225380|PRR11|55771|proline rich 11##AK001891|PRR11|55771|proline rich 11##AK225377|PRR11|55771|proline rich 11##FJ161961|PRR11|55771|proline rich 11##BC008669|PRR11|55771|proline rich 11##NM_018304|PRR11|55771|proline rich 11##NM_001100595|SKA2|348235|spindle and kinetochore associated complex subunit 2##NM_182620|SKA2|348235|spindle and kinetochore associated complex subunit 2##AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)	0.04378	
chr22	19768009	19768134	reg1042923.p2	3.421	+	AF012130 AF012131 AF373867 NM_005992 NM_080646 NM_080647	-23846	+	NM_000407 J03259	-57004	+	L20860 TSC_hg19_v1_chr22_+_19710169	-57928	+	TSC_hg19_v1_chr22_-_19842337 AK291262 BX640785 BX640969 BX640998	74270	-	TSC_hg19_v1_chr22_-_19842398 BC012060 NM_024627 BC008696 AB051432 AL832509 AF301895 AF238328 AY007378 NM_053004	74334	-	TSC_hg19_v1_chr22_-_19929293 AB209724	161207	-	AF012130|TBX1|6899|T-box 1##AF012131|TBX1|6899|T-box 1##AF373867|TBX1|6899|T-box 1##NM_005992|TBX1|6899|T-box 1##NM_080646|TBX1|6899|T-box 1##NM_080647|TBX1|6899|T-box 1##NM_000407|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide##J03259|GP1BB|2812|glycoprotein Ib (platelet), beta polypeptide##L20860|SEPT5-GP1BB|100526833|SEPT5-GP1BB readthrough##AK291262|C22orf29|79680|chromosome 22 open reading frame 29##BX640785|C22orf29|79680|chromosome 22 open reading frame 29##BX640969|C22orf29|79680|chromosome 22 open reading frame 29##BX640998|C22orf29|79680|chromosome 22 open reading frame 29##BC012060|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_024627|C22orf29|79680|chromosome 22 open reading frame 29##BC008696|C22orf29|79680|chromosome 22 open reading frame 29##AB051432|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AL832509|C22orf29|79680|chromosome 22 open reading frame 29##AF301895|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AF238328|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AY007378|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##NM_053004|GNB1L|54584|guanine nucleotide binding protein (G protein), beta polypeptide 1-like##AB209724|TXNRD2|10587|thioredoxin reductase 2	0.310151	CTCF.p2:-3:0.310
chr5	10256194	10256261	reg1037452.p1	3.421	+	TSC_hg19_v1_chr5_+_10250440 DQ892743 DQ895989 AB383748 BC002971	-5777	+	TSC_hg19_v1_chr5_+_10250410 D43950 BC006543 AK293437 AK303147 AK289353	-5805	+	AK303086 TSC_hg19_v1_chr5_+_10250407	-5822	+	BC001573 TSC_hg19_v1_chr5_-_10307978 AJ278125 AK074197	51704	-	NM_138809	51940	-	TSC_hg19_v1_chr5_-_10353712 BC032907	97486	-	DQ892743|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##DQ895989|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##BC002971|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##D43950|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##BC006543|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK293437|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK303147|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK289353|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##AK303086|CCT5|22948|chaperonin containing TCP1, subunit 5 (epsilon)##BC001573|CMBL|134147|carboxymethylenebutenolidase homolog (Pseudomonas)##AJ278125|CMBL|134147|carboxymethylenebutenolidase homolog (Pseudomonas)##AK074197|CMBL|134147|carboxymethylenebutenolidase homolog (Pseudomonas)##NM_138809|CMBL|134147|carboxymethylenebutenolidase homolog (Pseudomonas)	0.0	
chr6	26544280	26544412	reg1040027.p2	3.421	+	TSC_hg19_v1_chr6_+_26538630 NM_006353 AK311841 BC001282	-5716	+	U39576 BC096312 BC096313 BC096314 BC096315 NM_001732	-42875	+	NM_001197234 NM_007049 NM_078476 TSC_hg19_v1_chr6_+_26458182 AK297098 NM_001197233 BC016661 AB209777 U90543	-86156	+	TSC_hg19_v1_chr6_+_26597203 NM_013375 BC066313 BC048812 AB027258 AB463399 CU688138 CU690582 EU446795	52861	+	TSC_hg19_v1_chr6_-_26659967 NM_001242797 NM_001242798 NM_001242799 NM_024639	115606	-	AB591038 BC014312 TSC_hg19_v1_chr6_-_27100575 NM_021058 AK311849	556219	-	NM_006353|HMGN4|10473|high mobility group nucleosomal binding domain 4##AK311841|HMGN4|10473|high mobility group nucleosomal binding domain 4##BC001282|HMGN4|10473|high mobility group nucleosomal binding domain 4##U39576|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096312|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096313|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096314|BTN1A1|696|butyrophilin, subfamily 1, member A1##BC096315|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001732|BTN1A1|696|butyrophilin, subfamily 1, member A1##NM_001197234|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_007049|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_078476|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AK297098|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_001197233|BTN2A1|11120|butyrophilin, subfamily 2, member A1##BC016661|BTN2A1|11120|butyrophilin, subfamily 2, member A1##AB209777|BTN2A1|11120|butyrophilin, subfamily 2, member A1##U90543|BTN2A1|11120|butyrophilin, subfamily 2, member A1##NM_013375|ABT1|29777|activator of basal transcription 1##BC066313|ABT1|29777|activator of basal transcription 1##BC048812|ABT1|29777|activator of basal transcription 1##AB027258|ABT1|29777|activator of basal transcription 1##EU446795|ABT1|29777|activator of basal transcription 1##NM_001242797|ZNF322|79692|zinc finger protein 322##NM_001242798|ZNF322|79692|zinc finger protein 322##NM_001242799|ZNF322|79692|zinc finger protein 322##NM_024639|ZNF322|79692|zinc finger protein 322##BC014312|HIST1H2BJ|8970|histone cluster 1, H2bj##NM_021058|HIST1H2BJ|8970|histone cluster 1, H2bj##AK311849|HIST1H2BJ|8970|histone cluster 1, H2bj	0.0	
chr7	145488467	145488647	reg1044547.p1	3.421	+	AK289652 TSC_hg19_v1_chr7_-_144533147 BC068460 AY206415 AF297710 AK308693 NM_001042482 NM_022445	-955421	-	TSC_hg19_v1_chr7_-_144533086 AK091736	-955468	-	NM_001080413 AB528776	-1381238	-	NM_014141	324895	+	AF319045 AK315113 TSC_hg19_v1_chr7_+_145813941	325327	+	TSC_hg19_v1_chr7_+_148036552 CR933671	2548008	+	AK289652|TPK1|27010|thiamin pyrophosphokinase 1##BC068460|TPK1|27010|thiamin pyrophosphokinase 1##AY206415|TPK1|27010|thiamin pyrophosphokinase 1##AF297710|TPK1|27010|thiamin pyrophosphokinase 1##AK308693|TPK1|27010|thiamin pyrophosphokinase 1##NM_001042482|TPK1|27010|thiamin pyrophosphokinase 1##NM_022445|TPK1|27010|thiamin pyrophosphokinase 1##AK091736|TPK1|27010|thiamin pyrophosphokinase 1##NM_001080413|NOBOX|135935|NOBOX oogenesis homeobox##NM_014141|CNTNAP2|26047|contactin associated protein-like 2##AF319045|CNTNAP2|26047|contactin associated protein-like 2##AK315113|CNTNAP2|26047|contactin associated protein-like 2##CR933671|CNTNAP2|26047|contactin associated protein-like 2	0.0	
chr8	8475895	8475961	reg1039534.p2	3.421	+	AK122582 NM_001080826	-236706	-	TSC_hg19_v1_chr8_-_8175862 AF075060	-300040	-	TSC_hg19_v1_chr8_+_8086111 BC035792 AK307256 AK304567	-389786	+	AK123547 NM_194284 TSC_hg19_v1_chr8_+_8559701 BC125148 BC125149	83770	+	TSC_hg19_v1_chr8_-_8751060 NM_004225	275010	-	NM_153332 AL137679 TSC_hg19_v1_chr8_+_8860416	384437	+	AK122582|SGK223|157285|homolog of rat pragma of Rnd2##NM_001080826|SGK223|157285|homolog of rat pragma of Rnd2##AF075060|SGK223|157285|homolog of rat pragma of Rnd2##BC035792|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK307256|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK304567|FLJ10661|286042|family with sequence similarity 86, member A pseudogene##AK123547|CLDN23|137075|claudin 23##NM_194284|CLDN23|137075|claudin 23##BC125148|CLDN23|137075|claudin 23##BC125149|CLDN23|137075|claudin 23##NM_004225|MFHAS1|9258|malignant fibrous histiocytoma amplified sequence 1##NM_153332|ERI1|90459|exoribonuclease 1##AL137679|ERI1|90459|exoribonuclease 1	0.0	
chr9	102524899	102525022	reg1037420.p1	3.421	+	AK223384 TSC_hg19_v1_chr9_+_101984563 BC001734 NM_006808 L25085	-540373	+	TSC_hg19_v1_chr9_-_101984233 NM_033087	-540717	-	TSC_hg19_v1_chr9_-_101984223 AK075172 AK074988	-540743	-	TSC_hg19_v1_chr9_-_102582187 AK057451	57205	-	D78579 NM_006981 NM_173199 NM_173200 AK226108 TSC_hg19_v1_chr9_+_102584166 X89894	59197	+	TSC_hg19_v1_chr9_+_102668935 NM_017919 AK295949 BC051790	143967	+	AK223384|SEC61B|10952|Sec61 beta subunit##BC001734|SEC61B|10952|Sec61 beta subunit##NM_006808|SEC61B|10952|Sec61 beta subunit##L25085|SEC61B|10952|Sec61 beta subunit##NM_033087|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK075172|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##AK074988|ALG2|85365|asparagine-linked glycosylation 2, alpha-1,3-mannosyltransferase homolog (S. cerevisiae)##D78579|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_006981|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173199|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_173200|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##AK226108|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##X89894|NR4A3|8013|nuclear receptor subfamily 4, group A, member 3##NM_017919|STX17|55014|syntaxin 17##AK295949|STX17|55014|syntaxin 17##BC051790|STX17|55014|syntaxin 17	0.0	
chr9	36638020	36638120	reg1038510.p2	3.421	+	TSC_hg19_v1_chr9_+_36572891 AK222811 AK296820 D79997 AK302374 AK293284 AK293423 AK300761 AK293447 AK309470 BC014039 NM_014791 AB183428 AK299164 AK300821 AB183427 AK301131	-65146	+	TSC_hg19_v1_chr9_-_36401191 NM_194330	-236895	-	TSC_hg19_v1_chr9_-_36400891 AK093480 AX748155 AF394047 NM_194328 NM_194332	-237173	-	TSC_hg19_v1_chr9_-_37034361 NM_016734	396346	-	TSC_hg19_v1_chr9_+_37079908 AK091718	441836	+	TSC_hg19_v1_chr9_+_37080004 BC032471 BC033624 BC080614 BC067112	441938	+	AK222811|MELK|9833|maternal embryonic leucine zipper kinase##AK296820|MELK|9833|maternal embryonic leucine zipper kinase##D79997|MELK|9833|maternal embryonic leucine zipper kinase##AK302374|MELK|9833|maternal embryonic leucine zipper kinase##AK293284|MELK|9833|maternal embryonic leucine zipper kinase##AK293423|MELK|9833|maternal embryonic leucine zipper kinase##AK300761|MELK|9833|maternal embryonic leucine zipper kinase##AK293447|MELK|9833|maternal embryonic leucine zipper kinase##AK309470|MELK|9833|maternal embryonic leucine zipper kinase##BC014039|MELK|9833|maternal embryonic leucine zipper kinase##NM_014791|MELK|9833|maternal embryonic leucine zipper kinase##AB183428|MELK|9833|maternal embryonic leucine zipper kinase##AK299164|MELK|9833|maternal embryonic leucine zipper kinase##AK300821|MELK|9833|maternal embryonic leucine zipper kinase##AB183427|MELK|9833|maternal embryonic leucine zipper kinase##AK301131|MELK|9833|maternal embryonic leucine zipper kinase##NM_194330|RNF38|152006|ring finger protein 38##AK093480|RNF38|152006|ring finger protein 38##AX748155|RNF38|152006|ring finger protein 38##AF394047|RNF38|152006|ring finger protein 38##NM_194328|RNF38|152006|ring finger protein 38##NM_194332|RNF38|152006|ring finger protein 38##NM_016734|PAX5|5079|paired box 5##AK091718|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC032471|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC033624|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene##BC080614|LOC100506710|100506710|endogenous Bornavirus-like nucleoprotein 2 pseudogene	0.0	
chr1	228155903	228156040	reg1025753.p2	3.420	+	AB590917 HQ258230 AB060283 AK131041 TSC_hg19_v1_chr1_-_228135634 BC111960 BC113431 NM_003395	-20340	-	BC130400 HQ258179 NM_183062	-152590	+	CU676318 TSC_hg19_v1_chr1_+_227923140 BX648570 AK054633 BC011145 BC007786	-232839	+	NM_033131 AK056278 BC103921 BC103922 BC103923 AB060284	38802	+	AK000620 NM_001024226 NM_001658 TSC_hg19_v1_chr1_+_228270371	114400	+	TSC_hg19_v1_chr1_+_228270422 BC011358 AK293553 AK297792 AK057875 AF052179	114439	+	HQ258230|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AB060283|WNT9A|7483|wingless-type MMTV integration site family, member 9A##AK131041|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC111960|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC113431|WNT9A|7483|wingless-type MMTV integration site family, member 9A##NM_003395|WNT9A|7483|wingless-type MMTV integration site family, member 9A##BC130400|PRSS38|339501|protease, serine, 38##HQ258179|PRSS38|339501|protease, serine, 38##NM_183062|PRSS38|339501|protease, serine, 38##BX648570|SNAP47|116841|synaptosomal-associated protein, 47kDa##AK054633|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC011145|SNAP47|116841|synaptosomal-associated protein, 47kDa##BC007786|SNAP47|116841|synaptosomal-associated protein, 47kDa##NM_033131|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK056278|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103921|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103922|WNT3A|89780|wingless-type MMTV integration site family, member 3A##BC103923|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AB060284|WNT3A|89780|wingless-type MMTV integration site family, member 3A##AK000620|ARF1|375|ADP-ribosylation factor 1##NM_001024226|ARF1|375|ADP-ribosylation factor 1##NM_001658|ARF1|375|ADP-ribosylation factor 1##BC011358|ARF1|375|ADP-ribosylation factor 1##AK293553|ARF1|375|ADP-ribosylation factor 1##AK297792|ARF1|375|ADP-ribosylation factor 1##AK057875|ARF1|375|ADP-ribosylation factor 1##AF052179|ARF1|375|ADP-ribosylation factor 1	1.038857	CTCF.p2:-12:0.988
chr1	33467062	33467188	reg1041702.p2	3.420	+	NM_001127361 NM_153341 TSC_hg19_v1_chr1_-_33430415 AK131439	-36729	-	AY359883 TSC_hg19_v1_chr1_-_33366959 AY027543 BC020497 BC001418 BC013953 NM_033504 BC023260	-100191	-	TSC_hg19_v1_chr1_+_33352097 DQ426877 AK313907 BC001777 NM_002143	-115041	+	AB451267 AB451394 AY080900 U54645 BC009405 AK307731 TSC_hg19_v1_chr1_-_33502450 AK295105 AK296863 BC026705 AK291676 AK297036	35314	-	TSC_hg19_v1_chr1_-_33502463 BC070127 BC090040 U84371 U39945 AY080899	35332	-	TSC_hg19_v1_chr1_-_33502465 AB005621	35341	-	NM_001127361|RNF19B|127544|ring finger protein 19B##NM_153341|RNF19B|127544|ring finger protein 19B##AK131439|RNF19B|127544|ring finger protein 19B##AY359883|TMEM54|113452|transmembrane protein 54##AY027543|TMEM54|113452|transmembrane protein 54##BC020497|TMEM54|113452|transmembrane protein 54##BC001418|TMEM54|113452|transmembrane protein 54##BC013953|TMEM54|113452|transmembrane protein 54##NM_033504|TMEM54|113452|transmembrane protein 54##BC023260|TMEM54|113452|transmembrane protein 54##DQ426877|HPCA|3208|hippocalcin##AK313907|HPCA|3208|hippocalcin##BC001777|HPCA|3208|hippocalcin##NM_002143|HPCA|3208|hippocalcin##AB451267|AK2|204|adenylate kinase 2##AB451394|AK2|204|adenylate kinase 2##AY080900|AK2|204|adenylate kinase 2##U54645|AK2|204|adenylate kinase 2##BC009405|AK2|204|adenylate kinase 2##AK307731|AK2|204|adenylate kinase 2##AK295105|AK2|204|adenylate kinase 2##AK296863|AK2|204|adenylate kinase 2##BC026705|AK2|204|adenylate kinase 2##AK291676|AK2|204|adenylate kinase 2##AK297036|AK2|204|adenylate kinase 2##BC070127|AK2|204|adenylate kinase 2##BC090040|AK2|204|adenylate kinase 2##U84371|AK2|204|adenylate kinase 2##U39945|AK2|204|adenylate kinase 2##AY080899|AK2|204|adenylate kinase 2##AB005621|AK2|204|adenylate kinase 2	0.0	
chr13	41995534	41995613	reg1043961.p1	3.420	+	NM_001110798 NM_018527 NM_024561 TSC_hg19_v1_chr13_+_41885376 BC064592 BC032318 AK291248 AK097224 BX640665 BC101719 BC101721 BC143506 CU689326	-110071	+	AK055086 AF072934 TSC_hg19_v1_chr13_-_41837713 BC027731 BC038427 BC042196 BC065496 NM_004294 AK294343	-157893	-	TSC_hg19_v1_chr13_-_41768706 AK299614 AL136782 AK315589 BC022033 FJ150424 NM_032138 AK091344 AX746923	-226948	-	TSC_hg19_v1_chr13_+_42031539 NM_014059	35978	+	TSC_hg19_v1_chr13_+_42031685 BC066334	36110	+	TSC_hg19_v1_chr13_+_42031690 BC038706 AF036549	36127	+	NM_001110798|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_018527|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##NM_024561|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC064592|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC032318|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK291248|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK097224|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BX640665|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101719|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC101721|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##BC143506|NAA16|79612|N(alpha)-acetyltransferase 16, NatA auxiliary subunit##AK055086|MTRF1|9617|mitochondrial translational release factor 1##AF072934|MTRF1|9617|mitochondrial translational release factor 1##BC027731|MTRF1|9617|mitochondrial translational release factor 1##BC038427|MTRF1|9617|mitochondrial translational release factor 1##BC042196|MTRF1|9617|mitochondrial translational release factor 1##BC065496|MTRF1|9617|mitochondrial translational release factor 1##NM_004294|MTRF1|9617|mitochondrial translational release factor 1##AK294343|MTRF1|9617|mitochondrial translational release factor 1##AK299614|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AL136782|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK315589|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##BC022033|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##FJ150424|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_032138|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##AK091344|KBTBD7|84078|kelch repeat and BTB (POZ) domain containing 7##NM_014059|C13orf15|28984|chromosome 13 open reading frame 15##BC066334|C13orf15|28984|chromosome 13 open reading frame 15##BC038706|C13orf15|28984|chromosome 13 open reading frame 15##AF036549|C13orf15|28984|chromosome 13 open reading frame 15	0.0	
chr14	22025605	22025785	reg1004731.p1	3.420	+	AK293574 AK001276 BC136528 BC136529 AK299931 X98834 AB002358 NM_005407	-20510	-	AK294051 BC024245 AK296414 BC090958 AK289358 TSC_hg19_v1_chr14_-_21994473	-31283	-	EU446825 TSC_hg19_v1_chr14_-_21979476 BC052244 AK000222 BC001650 BC003031 BC014427 NM_019852 AK300289 AK304251 AK304570	-46260	-	AB528817 NM_001005465	13179	-	NM_001005466 AB529274 BC137371 BC137382	77351	-	AB463964 NM_001001912 AY726598	107627	+	AK293574|SALL2|6297|sal-like 2 (Drosophila)##AK001276|SALL2|6297|sal-like 2 (Drosophila)##BC136528|SALL2|6297|sal-like 2 (Drosophila)##BC136529|SALL2|6297|sal-like 2 (Drosophila)##AK299931|SALL2|6297|sal-like 2 (Drosophila)##X98834|SALL2|6297|sal-like 2 (Drosophila)##AB002358|SALL2|6297|sal-like 2 (Drosophila)##NM_005407|SALL2|6297|sal-like 2 (Drosophila)##AK294051|SALL2|6297|sal-like 2 (Drosophila)##BC024245|SALL2|6297|sal-like 2 (Drosophila)##AK296414|SALL2|6297|sal-like 2 (Drosophila)##BC090958|SALL2|6297|sal-like 2 (Drosophila)##AK289358|SALL2|6297|sal-like 2 (Drosophila)##EU446825|METTL3|56339|methyltransferase like 3##BC052244|METTL3|56339|methyltransferase like 3##AK000222|METTL3|56339|methyltransferase like 3##BC001650|METTL3|56339|methyltransferase like 3##BC003031|METTL3|56339|methyltransferase like 3##BC014427|METTL3|56339|methyltransferase like 3##NM_019852|METTL3|56339|methyltransferase like 3##AK300289|METTL3|56339|methyltransferase like 3##AK304251|METTL3|56339|methyltransferase like 3##AK304570|METTL3|56339|methyltransferase like 3##NM_001005465|OR10G3|26533|olfactory receptor, family 10, subfamily G, member 3##NM_001005466|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137371|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##BC137382|OR10G2|26534|olfactory receptor, family 10, subfamily G, member 2##NM_001001912|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2##AY726598|OR4E2|26686|olfactory receptor, family 4, subfamily E, member 2	0.0	
chr1	46011020	46011201	reg1028125.p2	3.420	+	NM_001202431	-22549	-	X67951 L19184 TSC_hg19_v1_chr1_-_45987557 AK311898 BC007063 AK131049 BC021683 NM_002574 NM_181696 NM_181697	-23532	-	AK098537 NM_015506 TSC_hg19_v1_chr1_+_45965990 AL080062 BC006122	-45171	+	NM_001202413 NM_001202414 NM_006066 NM_153326 TSC_hg19_v1_chr1_+_46016497 AK311175 AK307068	5378	+	TSC_hg19_v1_chr1_+_46016568 BC000670 AK307237 AK307288	5437	+	TSC_hg19_v1_chr1_+_46016747 AK293083 BC005394	5622	+	NM_001202431|PRDX1|5052|peroxiredoxin 1##X67951|PRDX1|5052|peroxiredoxin 1##L19184|PRDX1|5052|peroxiredoxin 1##AK311898|PRDX1|5052|peroxiredoxin 1##BC007063|PRDX1|5052|peroxiredoxin 1##AK131049|PRDX1|5052|peroxiredoxin 1##BC021683|PRDX1|5052|peroxiredoxin 1##NM_002574|PRDX1|5052|peroxiredoxin 1##NM_181696|PRDX1|5052|peroxiredoxin 1##NM_181697|PRDX1|5052|peroxiredoxin 1##AK098537|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##NM_015506|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##AL080062|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##BC006122|MMACHC|25974|methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria##NM_001202413|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_001202414|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_006066|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##NM_153326|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307068|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##BC000670|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307237|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307288|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK293083|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##BC005394|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)	0.0	
chr15	31621111	31621203	reg1042768.p2	3.420	+	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	-1819	+	NM_001243538	-98108	-	GQ502181 HM135791 NM_001252020	-167729	-	AJ430383 NM_130901	326384	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	541672	-	TSC_hg19_v1_chr15_-_32162898 AK126002	541786	-	AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A##AK126002|OTUD7A|161725|OTU domain containing 7A	0.0	
chr18	37664822	37664921	reg1029150.p1	3.420	+	TSC_hg19_v1_chr18_-_37380279 AK090603	-284603	-	TSC_hg19_v1_chr18_-_36915657 D28405	-749215	-	NM_001025087 NM_001025088 NM_001025089 NM_020180	-2518872	-	TSC_hg19_v1_chr18_+_39535200 NM_002647 Z46973	1870328	+	TSC_hg19_v1_chr18_+_39535244 BC033004 AK298517 BC010388 AK308364 BC053651 AB463170 DQ890552 DQ893712	1870362	+	AB590857 AF493922 AY563951 AK313823 BC018060 U71204 U78164 U78166 NM_002930 Y07565	3030698	-	AK090603|LOC647946|647946|uncharacterized LOC647946##NM_001025087|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025088|CELF4|56853|CUGBP, Elav-like family member 4##NM_001025089|CELF4|56853|CUGBP, Elav-like family member 4##NM_020180|CELF4|56853|CUGBP, Elav-like family member 4##NM_002647|PIK3C3|5289|phosphoinositide-3-kinase, class 3##Z46973|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC033004|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK298517|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC010388|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AK308364|PIK3C3|5289|phosphoinositide-3-kinase, class 3##BC053651|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ890552|PIK3C3|5289|phosphoinositide-3-kinase, class 3##DQ893712|PIK3C3|5289|phosphoinositide-3-kinase, class 3##AF493922|RIT2|6014|Ras-like without CAAX 2##AY563951|RIT2|6014|Ras-like without CAAX 2##AK313823|RIT2|6014|Ras-like without CAAX 2##BC018060|RIT2|6014|Ras-like without CAAX 2##U71204|RIT2|6014|Ras-like without CAAX 2##U78164|RIT2|6014|Ras-like without CAAX 2##U78166|RIT2|6014|Ras-like without CAAX 2##NM_002930|RIT2|6014|Ras-like without CAAX 2##Y07565|RIT2|6014|Ras-like without CAAX 2	0.0	
chr1	89015336	89015443	reg1043347.p1	3.420	+	TSC_hg19_v1_chr1_+_87797426 BC065818	-1217974	+	TSC_hg19_v1_chr1_+_87797312 AY321514	-1218064	+	TSC_hg19_v1_chr1_+_87794576 BC017673 BC003600	-1220708	+	TSC_hg19_v1_chr1_+_89149955 NM_006256 AK300304 AK298595 BC125199 S75548 U33052 AB527857	134706	+	AB451296 AB587461 CU676570 EU446894 TSC_hg19_v1_chr1_-_89357213 AX721092 M76766 BC021000	341822	-	AK289822 BC020597 TSC_hg19_v1_chr1_-_89357248 NM_001514	341884	-	BC065818|LMO4|8543|LIM domain only 4##BC017673|LMO4|8543|LIM domain only 4##BC003600|LMO4|8543|LIM domain only 4##NM_006256|PKN2|5586|protein kinase N2##AK300304|PKN2|5586|protein kinase N2##AK298595|PKN2|5586|protein kinase N2##BC125199|PKN2|5586|protein kinase N2##S75548|PKN2|5586|protein kinase N2##U33052|PKN2|5586|protein kinase N2##AB451296|GTF2B|2959|general transcription factor IIB##EU446894|GTF2B|2959|general transcription factor IIB##M76766|GTF2B|2959|general transcription factor IIB##AK289822|GTF2B|2959|general transcription factor IIB##BC020597|GTF2B|2959|general transcription factor IIB##NM_001514|GTF2B|2959|general transcription factor IIB	0.935641	CTCF.p2:25:0.936
chr2	160760317	160760428	reg1038644.p2	3.420	+	TSC_hg19_v1_chr2_-_160654754 AK304422 AY314007 NM_001198763 NM_001198764 NM_014880	-105616	-	TSC_hg19_v1_chr2_-_160654668 D14664 AF499000 AK291279 AK125081	-105673	-	TSC_hg19_v1_chr2_+_160569027 BC065014	-191332	+	AF064827 AY184222 AY314006 TSC_hg19_v1_chr2_-_160761248 AF011333 AK310678 BC057232	854	-	NM_001198759 NM_001198760 NM_002349 TSC_hg19_v1_chr2_-_160761270	918	-	BC140823 BC144631 TSC_hg19_v1_chr2_-_160919021	158607	-	AK304422|CD302|9936|CD302 molecule##AY314007|CD302|9936|CD302 molecule##NM_001198763|CD302|9936|CD302 molecule##NM_001198764|CD302|9936|CD302 molecule##NM_014880|CD302|9936|CD302 molecule##D14664|CD302|9936|CD302 molecule##AF499000|CD302|9936|CD302 molecule##AK291279|CD302|9936|CD302 molecule##AK125081|CD302|9936|CD302 molecule##BC065014|MARCH7|64844|membrane-associated ring finger (C3HC4) 7##AF064827|LY75|4065|lymphocyte antigen 75##AY184222|LY75-CD302|100526664|LY75-CD302 readthrough##AY314006|LY75-CD302|100526664|LY75-CD302 readthrough##AF011333|LY75|4065|lymphocyte antigen 75##AK310678|LY75|4065|lymphocyte antigen 75##BC057232|LY75|4065|lymphocyte antigen 75##NM_001198759|LY75-CD302|100526664|LY75-CD302 readthrough##NM_001198760|LY75-CD302|100526664|LY75-CD302 readthrough##NM_002349|LY75|4065|lymphocyte antigen 75##BC140823|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa##BC144631|PLA2R1|22925|phospholipase A2 receptor 1, 180kDa	0.0	
chr3	106322922	106323012	reg1036233.p2	3.420	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-735160	-	CR749655 TSC_hg19_v1_chr3_-_105421064	-901913	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-1237145	+	TSC_hg19_v1_chr3_-_106959482 BC036229	636512	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	636625	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	773343	+	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54	0.0	
chr5	6378564	6378631	reg1036868.p1	3.420	+	TSC_hg19_v1_chr5_+_5422794 AB023164 NM_015325 AB384549	-955688	+	TSC_hg19_v1_chr5_+_5422777 AK126937	-955822	+	AK127746 DQ266047 NM_139056 TSC_hg19_v1_chr5_+_5140442 AB462933 AJ315734	-1238086	+	AB591030 AY277599 AY598325 TSC_hg19_v1_chr5_-_6378661 AY453397 BC003353 NM_032286	53	-	NM_001145161 TSC_hg19_v1_chr5_+_6448927 BC150554 BC127723 AK308577	70256	+	TSC_hg19_v1_chr5_+_6449114 AK057805	70592	+	AB023164|KIAA0947|23379|KIAA0947##NM_015325|KIAA0947|23379|KIAA0947##AK127746|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##DQ266047|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##NM_139056|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AJ315734|ADAMTS16|170690|ADAM metallopeptidase with thrombospondin type 1 motif, 16##AY277599|MED10|84246|mediator complex subunit 10##AY598325|MED10|84246|mediator complex subunit 10##AY453397|MED10|84246|mediator complex subunit 10##BC003353|MED10|84246|mediator complex subunit 10##NM_032286|MED10|84246|mediator complex subunit 10##NM_001145161|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC150554|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##BC127723|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK308577|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1##AK057805|UBE2QL1|134111|ubiquitin-conjugating enzyme E2Q family-like 1	0.0	
chr8	23818018	23818145	reg1035069.p2	3.420	+	BC029044 AK297734 AK312589 NM_003155 U25997 TSC_hg19_v1_chr8_-_23712320	-105770	-	AB464642 NM_001136271	-253971	-	AB464643 AF249669 AF249670 AF249671 AF249672 EU446642 U91540 U80669 BC074863 BC074864 BC111569 BC111574 AF247704 NM_006167 TSC_hg19_v1_chr8_-_23540449	-277650	-	NM_014265 NM_021777 AK225921 AK293382 AK303437 AJ242015 AF137334 AF137335 BC136478 BC144140	333526	+	NM_001145271 NM_001145272 NM_014479 AK316320 BC069582 Y13323 AK301007 BC074877 BC074878 CU686914 AK300959 AK311528 AK316322	423826	+	BC058037 AK292492 NM_003817 AF215824 CU691292 AB527100	480450	+	BC029044|STC1|6781|stanniocalcin 1##AK297734|STC1|6781|stanniocalcin 1##AK312589|STC1|6781|stanniocalcin 1##NM_003155|STC1|6781|stanniocalcin 1##U25997|STC1|6781|stanniocalcin 1##AB464642|NKX2-6|137814|NK2 homeobox 6##NM_001136271|NKX2-6|137814|NK2 homeobox 6##AF249669|NKX3-1|4824|NK3 homeobox 1##AF249670|NKX3-1|4824|NK3 homeobox 1##AF249671|NKX3-1|4824|NK3 homeobox 1##AF249672|NKX3-1|4824|NK3 homeobox 1##EU446642|NKX3-1|4824|NK3 homeobox 1##U91540|NKX3-1|4824|NK3 homeobox 1##U80669|NKX3-1|4824|NK3 homeobox 1##BC074863|NKX3-1|4824|NK3 homeobox 1##BC074864|NKX3-1|4824|NK3 homeobox 1##AF247704|NKX3-1|4824|NK3 homeobox 1##NM_006167|NKX3-1|4824|NK3 homeobox 1##NM_014265|ADAM28|10863|ADAM metallopeptidase domain 28##NM_021777|ADAM28|10863|ADAM metallopeptidase domain 28##AK225921|ADAM28|10863|ADAM metallopeptidase domain 28##AK293382|ADAM28|10863|ADAM metallopeptidase domain 28##AK303437|ADAM28|10863|ADAM metallopeptidase domain 28##AJ242015|ADAM28|10863|ADAM metallopeptidase domain 28##AF137334|ADAM28|10863|ADAM metallopeptidase domain 28##AF137335|ADAM28|10863|ADAM metallopeptidase domain 28##BC136478|ADAM28|10863|ADAM metallopeptidase domain 28##BC144140|ADAM28|10863|ADAM metallopeptidase domain 28##NM_001145271|ADAMDEC1|27299|ADAM-like, decysin 1##NM_001145272|ADAMDEC1|27299|ADAM-like, decysin 1##NM_014479|ADAMDEC1|27299|ADAM-like, decysin 1##AK316320|ADAMDEC1|27299|ADAM-like, decysin 1##BC069582|ADAMDEC1|27299|ADAM-like, decysin 1##Y13323|ADAMDEC1|27299|ADAM-like, decysin 1##AK301007|ADAMDEC1|27299|ADAM-like, decysin 1##BC074877|ADAMDEC1|27299|ADAM-like, decysin 1##BC074878|ADAMDEC1|27299|ADAM-like, decysin 1##AK300959|ADAMDEC1|27299|ADAM-like, decysin 1##AK311528|ADAMDEC1|27299|ADAM-like, decysin 1##AK316322|ADAMDEC1|27299|ADAM-like, decysin 1##BC058037|ADAM7|8756|ADAM metallopeptidase domain 7##AK292492|ADAM7|8756|ADAM metallopeptidase domain 7##NM_003817|ADAM7|8756|ADAM metallopeptidase domain 7##AF215824|ADAM7|8756|ADAM metallopeptidase domain 7	0.964263	CTCF.p2:14:0.964
chr9	136001762	136001855	reg1040323.p1	3.420	+	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	-5309	-	NM_001807 S79774 M85201 BC042510 AK299965	-64433	+	TSC_hg19_v1_chr9_+_135906386 AK000194 AK097295 AK293980 BC006409 AY007123 DQ892071 DQ895265 AJ420443 BC030157	-95420	+	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	22878	-	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	37489	-	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	82812	-	AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B	0.0	
chr9	92137444	92137624	reg1030842.p2	3.420	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-24527	-	BC054500 NM_001142287 NM_006378	-42924	-	TSC_hg19_v1_chr9_+_91933425 AK302852 NM_024077 AK090608 AK290182 AX746532 BC036109 AL136881 BC001189 AF380995 BC099900 BC068466	-204116	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	82447	+	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	1267585	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	1426502	+	BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##AK302852|SECISBP2|79048|SECIS binding protein 2##NM_024077|SECISBP2|79048|SECIS binding protein 2##AK090608|SECISBP2|79048|SECIS binding protein 2##AK290182|SECISBP2|79048|SECIS binding protein 2##BC036109|SECISBP2|79048|SECIS binding protein 2##AL136881|SECISBP2|79048|SECIS binding protein 2##BC001189|SECISBP2|79048|SECIS binding protein 2##AF380995|SECISBP2|79048|SECIS binding protein 2##BC099900|SECISBP2|79048|SECIS binding protein 2##NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase	0.0	
chr1	158174147	158174327	reg1008339.p2	3.419	+	AK225996 TSC_hg19_v1_chr1_+_158150684 AK310541 J04142 AK310749 AB590619 CU693322	-23453	+	BC027926 NM_001766	-24501	+	TSC_hg19_v1_chr1_+_157963438 BC109192 BC109193 AK297788 AY017369	-210849	+	M28825 NM_001763	49689	+	AK226024 NM_001765	85323	+	CU686844 AB590508 AK303330 BC074747 AK310617 BC069481 BC104216 BC104217 M28826 NM_001764	127028	-	AK225996|CD1D|912|CD1d molecule##J04142|CD1D|912|CD1d molecule##AK310749|CD1D|912|CD1d molecule##BC027926|CD1D|912|CD1d molecule##NM_001766|CD1D|912|CD1d molecule##BC109192|KIRREL|55243|kin of IRRE like (Drosophila)##BC109193|KIRREL|55243|kin of IRRE like (Drosophila)##AK297788|KIRREL|55243|kin of IRRE like (Drosophila)##AY017369|KIRREL|55243|kin of IRRE like (Drosophila)##M28825|CD1A|909|CD1a molecule##NM_001763|CD1A|909|CD1a molecule##AK226024|CD1C|911|CD1c molecule##NM_001765|CD1C|911|CD1c molecule##AK303330|CD1B|910|CD1b molecule##BC074747|CD1B|910|CD1b molecule##AK310617|CD1B|910|CD1b molecule##BC069481|CD1B|910|CD1b molecule##BC104216|CD1B|910|CD1b molecule##BC104217|CD1B|910|CD1b molecule##M28826|CD1B|910|CD1b molecule##NM_001764|CD1B|910|CD1b molecule	0.0	
chr12	102329949	102330105	reg1031714.p1	3.419	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	-58569	+	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	-58909	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	-105441	-	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	125723	-	TSC_hg19_v1_chr12_-_102455791 BC010889	125750	-	TSC_hg19_v1_chr12_-_102455912 AK314970 AK223339 AF151874 AF155655 NM_016053	125834	-	AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##CR457171|CCDC53|51019|coiled-coil domain containing 53##BC010889|CCDC53|51019|coiled-coil domain containing 53##AK314970|CCDC53|51019|coiled-coil domain containing 53##AK223339|CCDC53|51019|coiled-coil domain containing 53##AF151874|CCDC53|51019|coiled-coil domain containing 53##AF155655|CCDC53|51019|coiled-coil domain containing 53##NM_016053|CCDC53|51019|coiled-coil domain containing 53	0.0	
chr13	89538071	89538157	reg1039699.p2	3.419	+	TSC_hg19_v1_chr13_+_88324783 AK024251 NM_015567 BC098106 BC098287 BC103497 BC103509	-1213245	+	BX648640 BC101070 BC101071 BC101072 BC101073 NM_032229 AK292793	-3164675	-	TSC_hg19_v1_chr13_-_84456473 AB067497 NM_052910	-5081614	-	TSC_hg19_v1_chr13_+_92050884 BC039730 AK312815 BC030584 NM_004466	2512790	+	TSC_hg19_v1_chr13_+_93879583 NM_005708 AF105267 AY358462 BC106947 AK304338 AK130013 AK290144 AK074741	4341313	+	AK293115 BC028311 DQ902581 S69231 BC104476 L18967 AJ000503 D17547 NM_001129889 NM_001922	5593712	-	AK024251|SLITRK5|26050|SLIT and NTRK-like family, member 5##NM_015567|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098106|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC098287|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103497|SLITRK5|26050|SLIT and NTRK-like family, member 5##BC103509|SLITRK5|26050|SLIT and NTRK-like family, member 5##BX648640|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101070|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101071|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101072|SLITRK6|84189|SLIT and NTRK-like family, member 6##BC101073|SLITRK6|84189|SLIT and NTRK-like family, member 6##NM_032229|SLITRK6|84189|SLIT and NTRK-like family, member 6##AK292793|SLITRK6|84189|SLIT and NTRK-like family, member 6##AB067497|SLITRK1|114798|SLIT and NTRK-like family, member 1##NM_052910|SLITRK1|114798|SLIT and NTRK-like family, member 1##BC039730|GPC5|2262|glypican 5##AK312815|GPC5|2262|glypican 5##BC030584|GPC5|2262|glypican 5##NM_004466|GPC5|2262|glypican 5##NM_005708|GPC6|10082|glypican 6##AF105267|GPC6|10082|glypican 6##AY358462|GPC6|10082|glypican 6##BC106947|GPC6|10082|glypican 6##AK304338|GPC6|10082|glypican 6##AK130013|GPC6|10082|glypican 6##AK290144|GPC6|10082|glypican 6##AK074741|GPC6|10082|glypican 6##AK293115|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##BC028311|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##DQ902581|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##S69231|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##L18967|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##AJ000503|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##D17547|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001129889|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)##NM_001922|DCT|1638|dopachrome tautomerase (dopachrome delta-isomerase, tyrosine-related protein 2)	0.0	
chr14	23299070	23299151	reg1040151.p2	3.419	+	TSC_hg19_v1_chr14_+_23299104 AK292011 AK000450 BX248749 BC055381 BC068070	0	+	TSC_hg19_v1_chr14_+_23299095 AK096946 NM_178336 NM_180982 NM_181304 NM_181305 NM_181306 NM_181307	-19	+	Y18474 BX248291 AF092032 AJ130718 NM_001126106	-10145	-	NM_004995 AK312657 TSC_hg19_v1_chr14_+_23305800 AK291325 BC064803	6690	+	TSC_hg19_v1_chr14_+_23305816 BC039581	6726	+	X83535 TSC_hg19_v1_chr14_+_23305909	6799	+	AK292011|MRPL52|122704|mitochondrial ribosomal protein L52##AK000450|MRPL52|122704|mitochondrial ribosomal protein L52##BX248749|MRPL52|122704|mitochondrial ribosomal protein L52##BC055381|MRPL52|122704|mitochondrial ribosomal protein L52##BC068070|MRPL52|122704|mitochondrial ribosomal protein L52##AK096946|MRPL52|122704|mitochondrial ribosomal protein L52##NM_178336|MRPL52|122704|mitochondrial ribosomal protein L52##NM_180982|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181304|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181305|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181306|MRPL52|122704|mitochondrial ribosomal protein L52##NM_181307|MRPL52|122704|mitochondrial ribosomal protein L52##Y18474|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##BX248291|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AF092032|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##AJ130718|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_001126106|SLC7A7|9056|solute carrier family 7 (amino acid transporter light chain, y+L system), member 7##NM_004995|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##AK312657|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##AK291325|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##BC064803|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##BC039581|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)##X83535|MMP14|4323|matrix metallopeptidase 14 (membrane-inserted)	0.0	
chr14	77013309	77013424	reg1040702.p2	3.419	+	NM_004452	-175677	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-395060	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-395089	+	TSC_hg19_v1_chr14_+_77227817 AK094330	214434	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	215089	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	215686	+	NM_004452|ESRRB|2103|estrogen-related receptor beta##AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1	0.764994	CTCF.p2:2:0.765
chr16	53086615	53086726	reg1039986.p1	3.419	+	AK299202 NM_001146188	-504957	-	NM_001080430	-505865	-	NM_001242473	-978824	-	TSC_hg19_v1_chr16_+_53088951 AY647157 BC022889 NM_025134	2211	+	TSC_hg19_v1_chr16_+_53133091 AK092208 AX747409 BC033770	46429	+	TSC_hg19_v1_chr16_+_53164923 DQ333316	78390	+	AK299202|TOX3|27324|TOX high mobility group box family member 3##NM_001146188|TOX3|27324|TOX high mobility group box family member 3##NM_001080430|TOX3|27324|TOX high mobility group box family member 3##NM_001242473|LOC388276|388276|hCG2045437##AY647157|CHD9|80205|chromodomain helicase DNA binding protein 9##BC022889|CHD9|80205|chromodomain helicase DNA binding protein 9##NM_025134|CHD9|80205|chromodomain helicase DNA binding protein 9##AK092208|CHD9|80205|chromodomain helicase DNA binding protein 9##BC033770|CHD9|80205|chromodomain helicase DNA binding protein 9##DQ333316|CHD9|80205|chromodomain helicase DNA binding protein 9	0.0	
chr17	29865253	29865385	reg1028999.p2	3.419	+	TSC_hg19_v1_chr17_+_29815032 AK097424	-50258	+	TSC_hg19_v1_chr17_+_29718794 BC093914 BC101517 AB058724 AJ314646	-146455	+	AY169244 NM_032932 TSC_hg19_v1_chr17_+_29718692	-146652	+	AF407672 AJ272196 TSC_hg19_v1_chr17_-_30186264 AK024772 BC012386 BC035483 NM_018405	320952	-	BC015454 AB527664 TSC_hg19_v1_chr17_-_30228686 AK057202 BC035325 AK225448 AF244135	363347	-	TSC_hg19_v1_chr17_-_30228739 AK315929 AF334386 NM_018428	363412	-	AK097424|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC093914|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##BC101517|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AB058724|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AJ314646|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AY169244|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##NM_032932|RAB11FIP4|84440|RAB11 family interacting protein 4 (class II)##AF407672|C17orf79|55352|chromosome 17 open reading frame 79##AJ272196|C17orf79|55352|chromosome 17 open reading frame 79##AK024772|C17orf79|55352|chromosome 17 open reading frame 79##BC012386|C17orf79|55352|chromosome 17 open reading frame 79##BC035483|C17orf79|55352|chromosome 17 open reading frame 79##NM_018405|C17orf79|55352|chromosome 17 open reading frame 79##BC015454|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK057202|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##BC035325|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK225448|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF244135|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AK315929|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##AF334386|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)##NM_018428|UTP6|55813|UTP6, small subunit (SSU) processome component, homolog (yeast)	0.0	
chr17	7068569	7068682	reg1036352.p2	3.419	+	X55283 TSC_hg19_v1_chr17_-_7018083 BC017251 NM_001181 NM_001201352 NM_080912 NM_080913 AK310123 AK303787	-50455	-	X55284 TSC_hg19_v1_chr17_-_7018008 M11025	-50636	-	AF529374 U97197 AB528625 CU677885 DQ892652 DQ895891 NM_080914	-51032	-	BC032130 TSC_hg19_v1_chr17_-_7082568	13939	-	M10058 AB070933 TSC_hg19_v1_chr17_-_7082680 AK308375 AK124286 NM_001197216 NM_001671	14143	-	TSC_hg19_v1_chr17_-_7106561 BC040533	37969	-	X55283|ASGR2|433|asialoglycoprotein receptor 2##BC017251|ASGR2|433|asialoglycoprotein receptor 2##NM_001181|ASGR2|433|asialoglycoprotein receptor 2##NM_001201352|ASGR2|433|asialoglycoprotein receptor 2##NM_080912|ASGR2|433|asialoglycoprotein receptor 2##NM_080913|ASGR2|433|asialoglycoprotein receptor 2##AK310123|ASGR2|433|asialoglycoprotein receptor 2##AK303787|ASGR2|433|asialoglycoprotein receptor 2##X55284|ASGR2|433|asialoglycoprotein receptor 2##M11025|ASGR2|433|asialoglycoprotein receptor 2##AF529374|ASGR2|433|asialoglycoprotein receptor 2##U97197|ASGR2|433|asialoglycoprotein receptor 2##DQ892652|ASGR2|433|asialoglycoprotein receptor 2##DQ895891|ASGR2|433|asialoglycoprotein receptor 2##NM_080914|ASGR2|433|asialoglycoprotein receptor 2##BC032130|ASGR1|432|asialoglycoprotein receptor 1##M10058|ASGR1|432|asialoglycoprotein receptor 1##AB070933|ASGR1|432|asialoglycoprotein receptor 1##AK308375|ASGR1|432|asialoglycoprotein receptor 1##AK124286|ASGR1|432|asialoglycoprotein receptor 1##NM_001197216|ASGR1|432|asialoglycoprotein receptor 1##NM_001671|ASGR1|432|asialoglycoprotein receptor 1##BC040533|DLG4|1742|discs, large homolog 4 (Drosophila)	0.860075	CTCF.p2:-11:0.808
chr2	175548357	175548454	reg1035739.p2	3.419	+	TSC_hg19_v1_chr2_-_175547635 BC110288 BX640870 NM_001077269	-651	-	TSC_hg19_v1_chr2_-_175499308 AF031588 NM_003387 AK301271 AK304194	-49108	-	TSC_hg19_v1_chr2_-_175462533 BC002914 X86019	-85924	-	TSC_hg19_v1_chr2_+_175584527 DQ895855	36173	+	AK291338 S77094 Y00762 BC006314 AK299445 AK315312 NM_000079 NM_001039523	80764	-	AK055060 NM_001206602	163905	-	BC110288|WIPF1|7456|WAS/WASL interacting protein family, member 1##BX640870|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_001077269|WIPF1|7456|WAS/WASL interacting protein family, member 1##AF031588|WIPF1|7456|WAS/WASL interacting protein family, member 1##NM_003387|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK301271|WIPF1|7456|WAS/WASL interacting protein family, member 1##AK304194|WIPF1|7456|WAS/WASL interacting protein family, member 1##BC002914|WIPF1|7456|WAS/WASL interacting protein family, member 1##X86019|WIPF1|7456|WAS/WASL interacting protein family, member 1##DQ895855|H3F3A|3020|H3 histone, family 3A##AK291338|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##S77094|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##Y00762|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##BC006314|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK299445|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK315312|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_000079|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##NM_001039523|CHRNA1|1134|cholinergic receptor, nicotinic, alpha 1 (muscle)##AK055060|CHN1|1123|chimerin (chimaerin) 1##NM_001206602|CHN1|1123|chimerin (chimaerin) 1	0.364364	CTCF.p2:10:0.364
chr2	231791219	231791346	reg1031632.p1	3.419	+	BC032694 NM_005683	-1342	-	TSC_hg19_v1_chr2_+_231729704 AY049777 EU831609 EU831632 EU831696 EU832488 EU832568 AB003629 CR457208	-61560	+	TSC_hg19_v1_chr2_+_231729669 AK056321 AK222697 AK307702 AL136603 BC050668 BC002424 AL713651 BC025742 AK295503 BC098563	-61604	+	NM_139073 AK093385 AX748090 BC036248 AK126086 BC047704 CU690472	69610	+	TSC_hg19_v1_chr2_+_231902259 NM_001144994	110955	+	TSC_hg19_v1_chr2_+_231921588 NM_001191037 NM_002807 AK307415 BC094720	130295	+	BC032694|GPR55|9290|G protein-coupled receptor 55##NM_005683|GPR55|9290|G protein-coupled receptor 55##AY049777|ITM2C|81618|integral membrane protein 2C##EU831609|ITM2C|81618|integral membrane protein 2C##EU831632|ITM2C|81618|integral membrane protein 2C##EU831696|ITM2C|81618|integral membrane protein 2C##EU832488|ITM2C|81618|integral membrane protein 2C##EU832568|ITM2C|81618|integral membrane protein 2C##AB003629|ITM2C|81618|integral membrane protein 2C##CR457208|ITM2C|81618|integral membrane protein 2C##AK056321|ITM2C|81618|integral membrane protein 2C##AK222697|ITM2C|81618|integral membrane protein 2C##AK307702|ITM2C|81618|integral membrane protein 2C##AL136603|ITM2C|81618|integral membrane protein 2C##BC050668|ITM2C|81618|integral membrane protein 2C##BC002424|ITM2C|81618|integral membrane protein 2C##AL713651|ITM2C|81618|integral membrane protein 2C##BC025742|ITM2C|81618|integral membrane protein 2C##AK295503|ITM2C|81618|integral membrane protein 2C##BC098563|ITM2C|81618|integral membrane protein 2C##NM_139073|SPATA3|130560|spermatogenesis associated 3##AK093385|SPATA3|130560|spermatogenesis associated 3##BC036248|SPATA3|130560|spermatogenesis associated 3##AK126086|SPATA3|130560|spermatogenesis associated 3##BC047704|SPATA3|130560|spermatogenesis associated 3##NM_001144994|C2orf72|257407|chromosome 2 open reading frame 72##NM_001191037|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##NM_002807|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##AK307415|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1##BC094720|PSMD1|5707|proteasome (prosome, macropain) 26S subunit, non-ATPase, 1	0.632542	CTCF.p2:48:0.633
chr2	26214807	26214987	reg1001483.p2	3.419	+	TSC_hg19_v1_chr2_-_26205437 NM_002254	-9457	-	BC092406 TSC_hg19_v1_chr2_-_26205366 AK293738 AK315324 BC042486 BX571741	-9550	-	TSC_hg19_v1_chr2_-_26101329 BX648218 CR933613 BX647527	-113474	-	NM_016131 TSC_hg19_v1_chr2_+_26256952 AL136650 AK023223	41957	+	AF086917 AF106681 BC000896 AB529109 AF297660 AF498945 CR457303 EU831649 EU831733 TSC_hg19_v1_chr2_+_26257540 AF091032	42570	+	AB124552 NM_001168241	181062	+	NM_002254|KIF3C|3797|kinesin family member 3C##BC092406|KIF3C|3797|kinesin family member 3C##AK293738|KIF3C|3797|kinesin family member 3C##AK315324|KIF3C|3797|kinesin family member 3C##BC042486|KIF3C|3797|kinesin family member 3C##BX571741|KIF3C|3797|kinesin family member 3C##BX648218|ASXL2|55252|additional sex combs like 2 (Drosophila)##CR933613|ASXL2|55252|additional sex combs like 2 (Drosophila)##BX647527|ASXL2|55252|additional sex combs like 2 (Drosophila)##NM_016131|RAB10|10890|RAB10, member RAS oncogene family##AL136650|RAB10|10890|RAB10, member RAS oncogene family##AK023223|RAB10|10890|RAB10, member RAS oncogene family##AF086917|RAB10|10890|RAB10, member RAS oncogene family##AF106681|RAB10|10890|RAB10, member RAS oncogene family##BC000896|RAB10|10890|RAB10, member RAS oncogene family##AF297660|RAB10|10890|RAB10, member RAS oncogene family##AF498945|RAB10|10890|RAB10, member RAS oncogene family##CR457303|RAB10|10890|RAB10, member RAS oncogene family##EU831649|RAB10|10890|RAB10, member RAS oncogene family##EU831733|RAB10|10890|RAB10, member RAS oncogene family##AF091032|RAB10|10890|RAB10, member RAS oncogene family##AB124552|FAM59B|150946|family with sequence similarity 59, member B##NM_001168241|FAM59B|150946|family with sequence similarity 59, member B	0.0	
chr4	161338591	161338688	reg1046123.p2	3.419	+	AK294459 NM_014247	-1149642	+	AK058100 NM_152543	-1382307	-	TSC_hg19_v1_chr4_+_159690225 AB040883 AL713802 AB385470	-1648354	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	1746512	-	TSC_hg19_v1_chr4_-_164088002 AK097352	2749353	-	TSC_hg19_v1_chr4_-_164088043 AK308601	2749398	-	AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AB040883|FNIP2|57600|folliculin interacting protein 2##AL713802|FNIP2|57600|folliculin interacting protein 2##AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.0	
chr5	158438284	158438376	reg1038100.p1	3.419	+	AF434813 CU678734 TSC_hg19_v1_chr5_-_157286136 BC004467 D79993 AK300257 AK092765 AX747715 NM_001195555 NM_001195556 NM_014666	-1152240	-	AK055297 TSC_hg19_v1_chr5_+_157184422	-1253950	+	BC126449 TSC_hg19_v1_chr5_+_157170749 AK095592 NM_173491 BC051353	-1267590	+	TSC_hg19_v1_chr5_-_158526431 AF208502 AK304438 AB527458 EU446855 EU832793 EU832804 GQ129329 GQ129403 HQ257943	88127	-	BC041178 TSC_hg19_v1_chr5_-_158526727 AK289712 BC038805 NM_024007	88412	-	AK304228 NM_001199382	196318	-	AF434813|CLINT1|9685|clathrin interactor 1##BC004467|CLINT1|9685|clathrin interactor 1##D79993|CLINT1|9685|clathrin interactor 1##AK300257|CLINT1|9685|clathrin interactor 1##AK092765|CLINT1|9685|clathrin interactor 1##NM_001195555|CLINT1|9685|clathrin interactor 1##NM_001195556|CLINT1|9685|clathrin interactor 1##NM_014666|CLINT1|9685|clathrin interactor 1##BC126449|LSM11|134353|LSM11, U7 small nuclear RNA associated##AK095592|LSM11|134353|LSM11, U7 small nuclear RNA associated##NM_173491|LSM11|134353|LSM11, U7 small nuclear RNA associated##BC051353|LSM11|134353|LSM11, U7 small nuclear RNA associated##AF208502|EBF1|1879|early B-cell factor 1##AK304438|EBF1|1879|early B-cell factor 1##EU446855|EBF1|1879|early B-cell factor 1##EU832793|EBF1|1879|early B-cell factor 1##EU832804|EBF1|1879|early B-cell factor 1##GQ129329|EBF1|1879|early B-cell factor 1##GQ129403|EBF1|1879|early B-cell factor 1##HQ257943|EBF1|1879|early B-cell factor 1##BC041178|EBF1|1879|early B-cell factor 1##AK289712|EBF1|1879|early B-cell factor 1##BC038805|EBF1|1879|early B-cell factor 1##NM_024007|EBF1|1879|early B-cell factor 1##AK304228|RNF145|153830|ring finger protein 145##NM_001199382|RNF145|153830|ring finger protein 145	0.0	
chr6	36694485	36694579	reg1040489.p2	3.419	+	AK125083 TSC_hg19_v1_chr6_+_36665627	-28904	+	TSC_hg19_v1_chr6_+_36646490 BC013967 AB209881 BC001935 BC000312 L25610 L26165 U03106 S67388 BC000275 L47232 L47233 AY008263	-48007	+	NM_000389 TSC_hg19_v1_chr6_+_36646486 AK309512 NM_001220778 U09579	-48061	+	TSC_hg19_v1_chr6_-_36807217 NM_020939	112686	-	TSC_hg19_v1_chr6_-_36807775 AB046819	113260	-	DQ892513 DQ895727 AB528504 TSC_hg19_v1_chr6_-_36842573 AK026636	148045	-	AK125083|RAB44|401258|RAB44, member RAS oncogene family##BC013967|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AB209881|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC001935|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000312|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L25610|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L26165|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U03106|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##S67388|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##BC000275|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47232|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##L47233|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_000389|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##AK309512|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_001220778|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##U09579|CDKN1A|1026|cyclin-dependent kinase inhibitor 1A (p21, Cip1)##NM_020939|CPNE5|57699|copine V##AB046819|CPNE5|57699|copine V##DQ892513|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##DQ895727|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1##AK026636|PPIL1|51645|peptidylprolyl isomerase (cyclophilin)-like 1	0.0	
chr12	132312537	132312608	reg1043241.p2	3.418	+	TSC_hg19_v1_chr12_+_132195639 BC024041 AK295149 AK310836 BC008707 BC015953 NM_004592 AB208921 U08377 BC113420 BC136678 BC144364	-116916	+	TSC_hg19_v1_chr12_+_132195623 BC142980	-116959	+	BX649116 NM_198827 TSC_hg19_v1_chr12_+_131438455	-874119	+	TSC_hg19_v1_chr12_+_132312945 BC045610 AB021225 NM_016155 BC040507	394	+	TSC_hg19_v1_chr12_+_132379266 AF045458 NM_003565	66701	+	TSC_hg19_v1_chr12_+_132413775 NM_001002020 AK292242	101187	+	BC024041|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC008707|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC015953|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##NM_004592|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##AB208921|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##U08377|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC113420|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC136678|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC144364|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BC142980|SFSWAP|6433|splicing factor, suppressor of white-apricot homolog (Drosophila)##BX649116|GPR133|283383|G protein-coupled receptor 133##NM_198827|GPR133|283383|G protein-coupled receptor 133##BC045610|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AB021225|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##NM_016155|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##BC040507|MMP17|4326|matrix metallopeptidase 17 (membrane-inserted)##AF045458|ULK1|8408|unc-51-like kinase 1 (C. elegans)##NM_003565|ULK1|8408|unc-51-like kinase 1 (C. elegans)##NM_001002020|PUS1|80324|pseudouridylate synthase 1##AK292242|PUS1|80324|pseudouridylate synthase 1	0.0	
chr14	34834642	34834726	reg1043222.p2	3.418	+	AB528983 BC102030 BC105938 BC105939 TSC_hg19_v1_chr14_-_34420283 BC010992 BC064924 BC111057 AJ310545 AK025273 AK123350 AK225473 AK296216 NM_022073	-414535	-	AF164438 AY157302 NM_001164749 NM_001165893 NM_022123 NM_173159 AB054575 AB054576 AB055962 AB463928	-1426194	+	NM_004274 U17195 AB002309 BC150288 BC150185 BC154413 TSC_hg19_v1_chr14_+_32798554 BC137232 BC137233	-2036148	+	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	96803	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	174201	-	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	264671	-	BC102030|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105938|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC105939|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC010992|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC064924|EGLN3|112399|egl nine homolog 3 (C. elegans)##BC111057|EGLN3|112399|egl nine homolog 3 (C. elegans)##AJ310545|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK025273|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK123350|EGLN3|112399|egl nine homolog 3 (C. elegans)##AK225473|EGLN3|112399|egl nine homolog 3 (C. elegans)##NM_022073|EGLN3|112399|egl nine homolog 3 (C. elegans)##AF164438|NPAS3|64067|neuronal PAS domain protein 3##AY157302|NPAS3|64067|neuronal PAS domain protein 3##NM_001164749|NPAS3|64067|neuronal PAS domain protein 3##NM_001165893|NPAS3|64067|neuronal PAS domain protein 3##NM_022123|NPAS3|64067|neuronal PAS domain protein 3##NM_173159|NPAS3|64067|neuronal PAS domain protein 3##AB054575|NPAS3|64067|neuronal PAS domain protein 3##AB054576|NPAS3|64067|neuronal PAS domain protein 3##AB055962|NPAS3|64067|neuronal PAS domain protein 3##NM_004274|AKAP6|9472|A kinase (PRKA) anchor protein 6##U17195|AKAP6|9472|A kinase (PRKA) anchor protein 6##AB002309|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150288|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC150185|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC154413|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137232|AKAP6|9472|A kinase (PRKA) anchor protein 6##BC137233|AKAP6|9472|A kinase (PRKA) anchor protein 6##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6	0.812897	CTCF.p2:8:0.813
chr1	68475909	68475977	reg1029652.p2	3.418	+	TSC_hg19_v1_chr1_-_68299145 AF365871 AK293101 AK223000 AL832431 AF119663 AF123766 BC005940 NM_018841	-176833	-	AK124028 TSC_hg19_v1_chr1_+_68297985 AK096081	-177955	+	TSC_hg19_v1_chr1_+_68151094 AB463698 AM393439 DQ893229 DQ896558	-324809	+	BC005362 U96750 NM_004675	40442	-	TSC_hg19_v1_chr1_-_68698207 BC137109 BC137113 BC110826 AB097018 AK074984 AK301613 BX648748 BX538320 NM_001002292 NM_001193334 AK074583 AK309779 DQ323735 AY359035 NM_024911	222214	-	AK289925 BC075035 BC075036 NM_000329 U18991	439693	-	AF365871|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK293101|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK223000|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AL832431|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF119663|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AF123766|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##BC005940|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##NM_018841|GNG12|55970|guanine nucleotide binding protein (G protein), gamma 12##AK124028|LOC100289178|100289178|uncharacterized LOC100289178##AM393439|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ893229|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##DQ896558|GADD45A|1647|growth arrest and DNA-damage-inducible, alpha##BC005362|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##U96750|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##NM_004675|DIRAS3|9077|DIRAS family, GTP-binding RAS-like 3##BC137109|WLS|79971|wntless homolog (Drosophila)##BC137113|WLS|79971|wntless homolog (Drosophila)##BC110826|WLS|79971|wntless homolog (Drosophila)##AB097018|WLS|79971|wntless homolog (Drosophila)##AK074984|WLS|79971|wntless homolog (Drosophila)##AK301613|WLS|79971|wntless homolog (Drosophila)##BX648748|WLS|79971|wntless homolog (Drosophila)##BX538320|WLS|79971|wntless homolog (Drosophila)##NM_001002292|WLS|79971|wntless homolog (Drosophila)##NM_001193334|WLS|79971|wntless homolog (Drosophila)##AK074583|WLS|79971|wntless homolog (Drosophila)##AK309779|WLS|79971|wntless homolog (Drosophila)##DQ323735|WLS|79971|wntless homolog (Drosophila)##AY359035|WLS|79971|wntless homolog (Drosophila)##NM_024911|WLS|79971|wntless homolog (Drosophila)##AK289925|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075035|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##BC075036|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##NM_000329|RPE65|6121|retinal pigment epithelium-specific protein 65kDa##U18991|RPE65|6121|retinal pigment epithelium-specific protein 65kDa	0.250171	CTCF.p2:40:0.250
chr20	1357528	1357651	reg1044250.p2	3.418	+	TSC_hg19_v1_chr20_-_1309809 BC002727 NM_080489	-47746	-	AK296577 TSC_hg19_v1_chr20_-_1309784	-47804	-	AF159228 NM_001199784	-51077	-	TSC_hg19_v1_chr20_-_1373659 AF205192 AB241123 AB241124 AB241125 BT007066 CR407613 CR542168 DQ891819 AB463639 X52220 BC005147 BC001925	16043	-	TSC_hg19_v1_chr20_-_1373733 D28444 M34539 AK309026	16133	-	TSC_hg19_v1_chr20_-_1373754 BC119733 BC119732 NM_000801 NM_001199786 NM_054014	16193	-	BC002727|SDCBP2|27111|syndecan binding protein (syntenin) 2##NM_080489|SDCBP2|27111|syndecan binding protein (syntenin) 2##AK296577|SDCBP2|27111|syndecan binding protein (syntenin) 2##AF159228|SDCBP2|27111|syndecan binding protein (syntenin) 2##NM_001199784|SDCBP2|27111|syndecan binding protein (syntenin) 2##AF205192|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241123|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241124|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AB241125|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BT007066|FKBP1A|2280|FK506 binding protein 1A, 12kDa##CR407613|FKBP1A|2280|FK506 binding protein 1A, 12kDa##CR542168|FKBP1A|2280|FK506 binding protein 1A, 12kDa##DQ891819|FKBP1A|2280|FK506 binding protein 1A, 12kDa##X52220|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC005147|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC001925|FKBP1A|2280|FK506 binding protein 1A, 12kDa##D28444|FKBP1A|2280|FK506 binding protein 1A, 12kDa##M34539|FKBP1A|2280|FK506 binding protein 1A, 12kDa##AK309026|FKBP1A-SDCBP2|100528031|FKBP1A-SDCBP2 readthrough (non-protein coding)##BC119733|FKBP1A|2280|FK506 binding protein 1A, 12kDa##BC119732|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_000801|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_001199786|FKBP1A|2280|FK506 binding protein 1A, 12kDa##NM_054014|FKBP1A|2280|FK506 binding protein 1A, 12kDa	0.0	
chr20	30949780	30949869	reg1038677.p2	3.418	+	TSC_hg19_v1_chr20_+_30946787 AK122923	-2998	+	TSC_hg19_v1_chr20_+_30946303 NM_001164603 NM_015338 BC100280 BC064984 BC137278 BC137280 AJ438952	-3654	+	TSC_hg19_v1_chr20_+_30865453 NM_004798 AK302403 AB002357	-84338	+	AB023195 TSC_hg19_v1_chr20_+_31017235	67387	+	TSC_hg19_v1_chr20_+_31037448 AL080086	87678	+	AK056286 TSC_hg19_v1_chr20_-_31071290 NM_080616	121441	-	AK122923|ASXL1|171023|additional sex combs like 1 (Drosophila)##NM_001164603|ASXL1|171023|additional sex combs like 1 (Drosophila)##NM_015338|ASXL1|171023|additional sex combs like 1 (Drosophila)##BC100280|ASXL1|171023|additional sex combs like 1 (Drosophila)##BC064984|ASXL1|171023|additional sex combs like 1 (Drosophila)##BC137278|ASXL1|171023|additional sex combs like 1 (Drosophila)##BC137280|ASXL1|171023|additional sex combs like 1 (Drosophila)##AJ438952|ASXL1|171023|additional sex combs like 1 (Drosophila)##NM_004798|KIF3B|9371|kinesin family member 3B##AB002357|KIF3B|9371|kinesin family member 3B##AB023195|ASXL1|171023|additional sex combs like 1 (Drosophila)##AK056286|C20orf112|140688|chromosome 20 open reading frame 112##NM_080616|C20orf112|140688|chromosome 20 open reading frame 112	0.0	
chr20	55982201	55982278	reg1033954.p2	3.418	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-15782	+	NM_001190472	-47362	-	AK292247 AY349350 NM_001015885	-55638	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	117962	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	153918	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	213299	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.0	
chr21	44727217	44727380	reg1030919.p2	3.418	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-138124	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-199614	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-199673	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	118691	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	119697	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	352064	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr2	231515264	231515422	reg1025109.p1	3.418	+	AK091898 NM_001206704	-233873	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-234387	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-234424	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	62203	+	TSC_hg19_v1_chr2_+_231577633 BC020570	62301	+	AK292382 NM_001130849 NM_001130850 AK315692	62935	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.0	
chr2	231659243	231659320	reg1035590.p2	3.418	+	AK292382 NM_001130849 NM_001130850 AK315692	-81003	+	TSC_hg19_v1_chr2_+_231577633 BC020570	-81637	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	-81735	+	TSC_hg19_v1_chr2_+_231729608 NM_001012514 NM_001012516 NM_030926	70279	+	TSC_hg19_v1_chr2_+_231729626 AF271781 AF272043	70348	+	TSC_hg19_v1_chr2_+_231729653 AK075361 AK090975 AK303199 AX746713	70364	+	AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##NM_016289|CAB39|51719|calcium binding protein 39##NM_001012514|ITM2C|81618|integral membrane protein 2C##NM_001012516|ITM2C|81618|integral membrane protein 2C##NM_030926|ITM2C|81618|integral membrane protein 2C##AF271781|ITM2C|81618|integral membrane protein 2C##AF272043|ITM2C|81618|integral membrane protein 2C##AK075361|ITM2C|81618|integral membrane protein 2C##AK090975|ITM2C|81618|integral membrane protein 2C##AK303199|ITM2C|81618|integral membrane protein 2C	0.0	
chr9	135674031	135674132	reg1030450.p1	3.418	+	AF142328 NM_012204 TSC_hg19_v1_chr9_+_135545875 BC094774 BC011619 BC022787 BC104755 BC112245 AB529214	-128225	+	AF335567 AF335568 AF335569 AF427339 AK027484 NM_022779 NM_138620	-128294	-	TSC_hg19_v1_chr9_+_135545447 BC060821	-128663	+	TSC_hg19_v1_chr9_+_135753719 BC012940	79687	+	BC037402 BC050576 NM_152572	80099	-	AK075259 AJ011375 NM_018956	80205	+	AF142328|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##NM_012204|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC094774|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC011619|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC022787|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC104755|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC112245|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##AF335567|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF335568|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF335569|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AF427339|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##AK027484|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##NM_022779|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##NM_138620|DDX31|64794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 31##BC060821|GTF3C4|9329|general transcription factor IIIC, polypeptide 4, 90kDa##BC012940|C9orf9|11092|chromosome 9 open reading frame 9##BC037402|AK8|158067|adenylate kinase 8##BC050576|AK8|158067|adenylate kinase 8##NM_152572|AK8|158067|adenylate kinase 8##AK075259|C9orf9|11092|chromosome 9 open reading frame 9##AJ011375|C9orf9|11092|chromosome 9 open reading frame 9##NM_018956|C9orf9|11092|chromosome 9 open reading frame 9	0.0	
chr1	112344187	112344322	reg1039688.p1	3.417	+	TSC_hg19_v1_chr1_+_112298524 AK301697 AK001506 BC031062 BC011556 AF106019 AF155803 AK314312 DQ892249 DQ895449 CU679958	-45705	+	AL137199 NM_198926 AK293989 TSC_hg19_v1_chr1_-_112298450	-45819	-	TSC_hg19_v1_chr1_+_112298189 NM_007204 BC034953 AF171063	-46035	+	AY863198 AF120491 NM_004980 NM_172198	187468	-	NM_018704 TSC_hg19_v1_chr1_+_112938844 AK023340	594572	+	TSC_hg19_v1_chr1_+_112938871 BC016029 AK022544 AK092791 AX747733	594614	+	AK301697|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK001506|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC031062|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC011556|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF106019|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF155803|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AK314312|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ892249|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##DQ895449|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AL137199|FAM212B|55924|family with sequence similarity 212, member B##NM_198926|FAM212B|55924|family with sequence similarity 212, member B##AK293989|FAM212B|55924|family with sequence similarity 212, member B##NM_007204|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##BC034953|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF171063|DDX20|11218|DEAD (Asp-Glu-Ala-Asp) box polypeptide 20##AF120491|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_004980|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_172198|KCND3|3752|potassium voltage-gated channel, Shal-related subfamily, member 3##NM_018704|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK023340|CTTNBP2NL|55917|CTTNBP2 N-terminal like##BC016029|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK022544|CTTNBP2NL|55917|CTTNBP2 N-terminal like##AK092791|LOC100129406|100129406|uncharacterized LOC100129406	0.55018	CTCF.p2:16:0.550
chr11	126592956	126593042	reg1037621.p1	3.417	+	TSC_hg19_v1_chr11_+_126275947 AK291577 AK314738 EU831802 EU831879 AY040826 CR456858	-317001	+	NM_006278 X74570	-366904	+	TSC_hg19_v1_chr11_-_126225452 AK096370	-367536	-	AB058770 BC071838 TSC_hg19_v1_chr11_-_126870667	277661	-	TSC_hg19_v1_chr11_-_126870685 AY358743 NM_001161707 NM_032531	277726	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	280306	+	AK291577|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK314738|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831802|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##EU831879|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AY040826|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##CR456858|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##NM_006278|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##X74570|ST3GAL4|6484|ST3 beta-galactoside alpha-2,3-sialyltransferase 4##AK096370|FLJ39051|399972|uncharacterized LOC399972##AB058770|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC071838|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##AY358743|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_001161707|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##NM_032531|KIRREL3|84623|kin of IRRE like 3 (Drosophila)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)	0.0	
chr1	152321103	152321221	reg1036788.p1	3.417	+	L01090 NM_002016	-23484	-	AB180729 NM_001009931 AY396741	-124493	-	CR933683 TSC_hg19_v1_chr1_+_152161805	-159367	+	AY827490 NM_001014342	11319	-	AF077831 AK291301 AK298640 AK316568 BC030807 NM_016190	65576	-	NM_178438	162157	+	L01090|FLG|2312|filaggrin##NM_002016|FLG|2312|filaggrin##AB180729|HRNR|388697|hornerin##NM_001009931|HRNR|388697|hornerin##AY396741|HRNR|388697|hornerin##AY827490|FLG2|388698|filaggrin family member 2##NM_001014342|FLG2|388698|filaggrin family member 2##AF077831|CRNN|49860|cornulin##AK291301|CRNN|49860|cornulin##AK298640|CRNN|49860|cornulin##AK316568|CRNN|49860|cornulin##BC030807|CRNN|49860|cornulin##NM_016190|CRNN|49860|cornulin##NM_178438|LCE5A|254910|late cornified envelope 5A	0.014261	
chr11	61721768	61721860	reg1036986.p2	3.417	+	BC015220 NM_001139443 NM_004183	-4459	+	TSC_hg19_v1_chr11_-_61684983 BC022239 NM_013401	-36826	-	AB529172 DQ892880 DQ896129 CU678796 TSC_hg19_v1_chr11_-_61659018 AF134404 AK295473 AK310523 AF084560 BC004901 NM_021727	-62860	-	CU677245 AK293701 TSC_hg19_v1_chr11_+_61722706 AK301392	848	+	CU688148 DQ891113 DQ894293 AB463634 AF088851 M12937 BC015156 M11146 X00318 M97164 TSC_hg19_v1_chr11_-_61735040 BC016857 BC001399	13163	-	BC020300 BC015946 BC063514 TSC_hg19_v1_chr11_-_61735103 BC011359 BC070494 AB062402 BC013724 BC073750 BC000857 BC035441 AK307190 AK311818 BC016009 BC066341 BC066961 BC104643 BC105802 L20941 D28463	13273	-	BC015220|BEST1|7439|bestrophin 1##NM_001139443|BEST1|7439|bestrophin 1##NM_004183|BEST1|7439|bestrophin 1##BC022239|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##NM_013401|RAB3IL1|5866|RAB3A interacting protein (rabin3)-like 1##DQ892880|FADS3|3995|fatty acid desaturase 3##DQ896129|FADS3|3995|fatty acid desaturase 3##AF134404|FADS3|3995|fatty acid desaturase 3##AK295473|FADS3|3995|fatty acid desaturase 3##AK310523|FADS3|3995|fatty acid desaturase 3##AF084560|FADS3|3995|fatty acid desaturase 3##BC004901|FADS3|3995|fatty acid desaturase 3##NM_021727|FADS3|3995|fatty acid desaturase 3##AK293701|BEST1|7439|bestrophin 1##AK301392|BEST1|7439|bestrophin 1##DQ891113|FTH1|2495|ferritin, heavy polypeptide 1##DQ894293|FTH1|2495|ferritin, heavy polypeptide 1##AF088851|FTH1|2495|ferritin, heavy polypeptide 1##M12937|FTH1|2495|ferritin, heavy polypeptide 1##BC015156|FTH1|2495|ferritin, heavy polypeptide 1##M11146|FTH1|2495|ferritin, heavy polypeptide 1##X00318|FTH1|2495|ferritin, heavy polypeptide 1##M97164|FTH1|2495|ferritin, heavy polypeptide 1##BC016857|FTH1|2495|ferritin, heavy polypeptide 1##BC001399|FTH1|2495|ferritin, heavy polypeptide 1##BC020300|FTH1|2495|ferritin, heavy polypeptide 1##BC015946|FTH1|2495|ferritin, heavy polypeptide 1##BC063514|FTH1|2495|ferritin, heavy polypeptide 1##BC011359|FTH1|2495|ferritin, heavy polypeptide 1##BC070494|FTH1|2495|ferritin, heavy polypeptide 1##AB062402|FTH1|2495|ferritin, heavy polypeptide 1##BC013724|FTH1|2495|ferritin, heavy polypeptide 1##BC073750|FTH1|2495|ferritin, heavy polypeptide 1##BC000857|FTH1|2495|ferritin, heavy polypeptide 1##BC035441|FTH1|2495|ferritin, heavy polypeptide 1##AK307190|CPSF7|79869|cleavage and polyadenylation specific factor 7, 59kDa##AK311818|FTH1|2495|ferritin, heavy polypeptide 1##BC016009|FTH1|2495|ferritin, heavy polypeptide 1##BC066341|FTH1|2495|ferritin, heavy polypeptide 1##BC066961|FTH1|2495|ferritin, heavy polypeptide 1##BC104643|FTH1|2495|ferritin, heavy polypeptide 1##BC105802|FTH1|2495|ferritin, heavy polypeptide 1##L20941|FTH1|2495|ferritin, heavy polypeptide 1##D28463|FTH1|2495|ferritin, heavy polypeptide 1	0.0	
chr12	1663668	1663827	reg1028443.p1	3.417	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-563295	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-604921	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-646665	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	39604	-	AY009399 NM_030775	62474	+	BC001749 NM_032642	74664	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.0	
chr13	113840645	113840825	reg1036806.p2	3.417	+	M55670 M55671 NM_003891 BC074906 BC074907	-27766	+	NM_000504 BC046125 TSC_hg19_v1_chr13_+_113777153 AK310772 AK310775 AK313798 BC040125 CU692304 M57285 K03194 M22613	-63568	+	AK310779 TSC_hg19_v1_chr13_+_113760101 AK298404 NM_000131 NM_019616 BC130468 M13232 AF272774 AK311682 AB527973 EU557239 HQ258414 AK311565	-80592	+	TSC_hg19_v1_chr13_-_113862984 CU677649 AK001302 BC031246 AK309321 AF183426 BC016614 AK023313 AK002167 AK289462 AK001185 AK000888 NM_001127202 NM_001127203 NM_018386	22251	-	TSC_hg19_v1_chr13_+_113863089 AL833355 NM_003589 AF077188	22366	+	TSC_hg19_v1_chr13_+_113863926 BC008308 NM_001008895 AB590820 AB178950 AY365124	23199	+	M55670|PROZ|8858|protein Z, vitamin K-dependent plasma glycoprotein##M55671|PROZ|8858|protein Z, vitamin K-dependent plasma glycoprotein##NM_003891|PROZ|8858|protein Z, vitamin K-dependent plasma glycoprotein##BC074906|PROZ|8858|protein Z, vitamin K-dependent plasma glycoprotein##BC074907|PROZ|8858|protein Z, vitamin K-dependent plasma glycoprotein##NM_000504|F10|2159|coagulation factor X##BC046125|F10|2159|coagulation factor X##AK310772|F10|2159|coagulation factor X##AK310775|F10|2159|coagulation factor X##AK313798|F10|2159|coagulation factor X##BC040125|F10|2159|coagulation factor X##M57285|F10|2159|coagulation factor X##K03194|F10|2159|coagulation factor X##M22613|F10|2159|coagulation factor X##AK310779|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##AK298404|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##NM_000131|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##NM_019616|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##BC130468|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##M13232|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##AK311682|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##EU557239|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##HQ258414|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##AK311565|F7|2155|coagulation factor VII (serum prothrombin conversion accelerator)##AK001302|PCID2|55795|PCI domain containing 2##BC031246|PCID2|55795|PCI domain containing 2##AK309321|PCID2|55795|PCI domain containing 2##AF183426|PCID2|55795|PCI domain containing 2##BC016614|PCID2|55795|PCI domain containing 2##AK023313|PCID2|55795|PCI domain containing 2##AK002167|PCID2|55795|PCI domain containing 2##AK289462|PCID2|55795|PCI domain containing 2##AK001185|PCID2|55795|PCI domain containing 2##AK000888|PCID2|55795|PCI domain containing 2##NM_001127202|PCID2|55795|PCI domain containing 2##NM_001127203|PCID2|55795|PCI domain containing 2##NM_018386|PCID2|55795|PCI domain containing 2##AL833355|CUL4A|8451|cullin 4A##NM_003589|CUL4A|8451|cullin 4A##AF077188|CUL4A|8451|cullin 4A##BC008308|CUL4A|8451|cullin 4A##NM_001008895|CUL4A|8451|cullin 4A##AB178950|CUL4A|8451|cullin 4A##AY365124|CUL4A|8451|cullin 4A	0.0	
chr14	103590314	103590392	reg1033816.p1	3.417	+	TSC_hg19_v1_chr14_+_103589771 BC017818	-608	+	BC113655 BC117375 NM_001077594 HQ258590	-23835	+	BC047871 BC048261 TSC_hg19_v1_chr14_-_103523736 AB032950 BC155541 NM_006035 BC078666 AF128625	-66616	-	M92357 NM_006291 BC128449 BC128450 TSC_hg19_v1_chr14_+_103592873	2415	+	NM_001969 TSC_hg19_v1_chr14_+_103800527	210157	+	TSC_hg19_v1_chr14_+_103800534 AL080102 AK026933	210187	+	BC017818|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC113655|EXOC3L4|91828|exocyst complex component 3-like 4##BC117375|EXOC3L4|91828|exocyst complex component 3-like 4##NM_001077594|EXOC3L4|91828|exocyst complex component 3-like 4##HQ258590|EXOC3L4|91828|exocyst complex component 3-like 4##BC047871|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC048261|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AB032950|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##BC155541|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##NM_006035|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##AF128625|CDC42BPB|9578|CDC42 binding protein kinase beta (DMPK-like)##M92357|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_006291|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128449|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##BC128450|TNFAIP2|7127|tumor necrosis factor, alpha-induced protein 2##NM_001969|EIF5|1983|eukaryotic translation initiation factor 5##AL080102|EIF5|1983|eukaryotic translation initiation factor 5##AK026933|EIF5|1983|eukaryotic translation initiation factor 5	0.0	
chr17	66768233	66768413	reg1016061.p2	3.417	+	AK056789 BC136686 BC136689 AY358197 NM_001243746 NM_017565 TSC_hg19_v1_chr17_-_66597112	-171300	-	AK298071 TSC_hg19_v1_chr17_-_66596742	-171584	-	TSC_hg19_v1_chr17_+_66508570 BC036285 S54705 AK124586 AK312307 CR749311 M18468 M33336	-259724	+	BC130280 BC143971 BC143972 AK304286 BC010392 AB020629 BC047765 BC094689 AK304360 AK295876 BC037309 BC024003 NM_007168	183133	-	BC062472 AK057068 AY028899 NM_080283	288767	-	BC125231 BC125232 AY028898 NM_080284 TSC_hg19_v1_chr17_-_67138037 BC070125 AK308431 BC029852	369752	-	AK056789|FAM20A|54757|family with sequence similarity 20, member A##BC136686|FAM20A|54757|family with sequence similarity 20, member A##BC136689|FAM20A|54757|family with sequence similarity 20, member A##AY358197|FAM20A|54757|family with sequence similarity 20, member A##NM_001243746|FAM20A|54757|family with sequence similarity 20, member A##NM_017565|FAM20A|54757|family with sequence similarity 20, member A##AK298071|FAM20A|54757|family with sequence similarity 20, member A##BC036285|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##S54705|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK124586|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##AK312307|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##CR749311|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M18468|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##M33336|PRKAR1A|5573|protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)##BC130280|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143971|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC143972|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304286|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC010392|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AB020629|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC047765|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC094689|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK304360|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##AK295876|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC037309|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC024003|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##NM_007168|ABCA8|10351|ATP-binding cassette, sub-family A (ABC1), member 8##BC062472|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AK057068|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##AY028899|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##NM_080283|ABCA9|10350|ATP-binding cassette, sub-family A (ABC1), member 9##BC125231|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC125232|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AY028898|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##NM_080284|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC070125|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##AK308431|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6##BC029852|ABCA6|23460|ATP-binding cassette, sub-family A (ABC1), member 6	0.0	
chr18	43871112	43871200	reg1039964.p1	3.417	+	TSC_hg19_v1_chr18_+_43754065 AK289738	-117074	+	TSC_hg19_v1_chr18_+_43754007 BC084579	-117141	+	TSC_hg19_v1_chr18_+_43754002 NM_001008239 NM_145055 AK292981	-117162	+	TSC_hg19_v1_chr18_+_43913942 AK055997	42776	+	AK091537 AK122819 AK127467 AX747044 NM_152470	43030	+	AK057232 BC047720 NM_001145473 NM_001173129	227884	-	AK289738|C18orf25|147339|chromosome 18 open reading frame 25##BC084579|C18orf25|147339|chromosome 18 open reading frame 25##NM_001008239|C18orf25|147339|chromosome 18 open reading frame 25##NM_145055|C18orf25|147339|chromosome 18 open reading frame 25##AK292981|C18orf25|147339|chromosome 18 open reading frame 25##AK055997|RNF165|494470|ring finger protein 165##AK091537|RNF165-IT1|147341|RNF165 intronic transcript 1 (non-protein coding)##AK122819|RNF165|494470|ring finger protein 165##AK127467|RNF165|494470|ring finger protein 165##NM_152470|RNF165|494470|ring finger protein 165##AK057232|LOXHD1|125336|lipoxygenase homology domains 1##BC047720|LOXHD1|125336|lipoxygenase homology domains 1##NM_001145473|LOXHD1|125336|lipoxygenase homology domains 1##NM_001173129|LOXHD1|125336|lipoxygenase homology domains 1	0.0	
chr18	56219547	56219696	reg1022699.p2	3.417	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-330771	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-330818	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-330859	+	BX647796 NM_052947	76567	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	119020	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	119107	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.0	
chr2	165573666	165573776	reg1041456.p1	3.417	+	TSC_hg19_v1_chr2_-_165551183 AK001813 AK002057	-22458	-	L76687 NM_004490	-95363	-	TSC_hg19_v1_chr2_-_165477987 AK307744 AK313153	-95728	-	TSC_hg19_v1_chr2_-_165697908 AB023194	124165	-	BC071588 NM_014900 TSC_hg19_v1_chr2_-_165697936	124216	-	TSC_hg19_v1_chr2_-_165698334 AK002054	124606	-	AK001813|COBLL1|22837|COBL-like 1##AK002057|COBLL1|22837|COBL-like 1##L76687|GRB14|2888|growth factor receptor-bound protein 14##NM_004490|GRB14|2888|growth factor receptor-bound protein 14##AK307744|GRB14|2888|growth factor receptor-bound protein 14##AK313153|GRB14|2888|growth factor receptor-bound protein 14##AB023194|COBLL1|22837|COBL-like 1##BC071588|COBLL1|22837|COBL-like 1##NM_014900|COBLL1|22837|COBL-like 1##AK002054|COBLL1|22837|COBL-like 1	0.122982	
chr7	17022578	17022758	reg1000954.p2	3.417	+	AY359065 BC058284 NM_176813	-101064	-	BC015503 AF115926 AF038451 AK296721 AK312942 TSC_hg19_v1_chr7_-_16844620 AK223067 AF088867 AF087879 AY359009 NM_006408	-177997	-	TSC_hg19_v1_chr7_+_16793401 AK093487 NM_014399 AK026587 AK075475 AK316595 AY358995 AF100759 BC033863 AF120265 DQ892059 DQ895252 CR542107	-229212	+	TSC_hg19_v1_chr7_+_17338275 AK307495 NM_001621 D16354 BC070080	315601	+	TSC_hg19_v1_chr7_+_17382906 BC021696	360238	+	TSC_hg19_v1_chr7_-_17980080 AK001861 BC041844 AB018256 AF420470 BC045667	957381	-	AY359065|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC058284|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##NM_176813|AGR3|155465|anterior gradient 3 homolog (Xenopus laevis)##BC015503|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF115926|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF038451|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK296721|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK312942|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK223067|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF088867|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AF087879|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AY359009|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##NM_006408|AGR2|10551|anterior gradient 2 homolog (Xenopus laevis)##AK093487|TSPAN13|27075|tetraspanin 13##NM_014399|TSPAN13|27075|tetraspanin 13##AK026587|TSPAN13|27075|tetraspanin 13##AK075475|TSPAN13|27075|tetraspanin 13##AK316595|TSPAN13|27075|tetraspanin 13##AY358995|TSPAN13|27075|tetraspanin 13##AF100759|TSPAN13|27075|tetraspanin 13##BC033863|TSPAN13|27075|tetraspanin 13##AF120265|TSPAN13|27075|tetraspanin 13##DQ892059|TSPAN13|27075|tetraspanin 13##DQ895252|TSPAN13|27075|tetraspanin 13##CR542107|TSPAN13|27075|tetraspanin 13##AK307495|AHR|196|aryl hydrocarbon receptor##NM_001621|AHR|196|aryl hydrocarbon receptor##D16354|AHR|196|aryl hydrocarbon receptor##BC070080|AHR|196|aryl hydrocarbon receptor##BC021696|AHR|196|aryl hydrocarbon receptor##AK001861|SNX13|23161|sorting nexin 13##BC041844|SNX13|23161|sorting nexin 13##AB018256|SNX13|23161|sorting nexin 13##AF420470|SNX13|23161|sorting nexin 13##BC045667|SNX13|23161|sorting nexin 13	0.0	
chr9	139748396	139748517	reg1037709.p1	3.417	+	TSC_hg19_v1_chr9_+_139746797 AY358419 NM_206920 BC144258 BC144259	-1647	+	TSC_hg19_v1_chr9_+_139743861 AF161490 AL136644 BC024648 AF164795 AB528207 AM393672 AF393504 CR533481	-4589	+	TSC_hg19_v1_chr9_+_139743450 AF131857 AF285119	-4962	+	BT009863 CR541914 DQ891577 DQ894770 AB590058 TSC_hg19_v1_chr9_-_139760757 AJ005259 AB002282 AB002283 BC015500 NM_003792 NM_153200	12282	-	TSC_hg19_v1_chr9_+_139780967 BX538160 BC043492 NM_021138 AK222961 AK294607 AK298370	32497	+	U12597 BC033810 AK054686 BC032410 TSC_hg19_v1_chr9_+_139780991	32531	+	AY358419|MAMDC4|158056|MAM domain containing 4##NM_206920|MAMDC4|158056|MAM domain containing 4##BC144258|MAMDC4|158056|MAM domain containing 4##BC144259|MAMDC4|158056|MAM domain containing 4##AF161490|PHPT1|29085|phosphohistidine phosphatase 1##AL136644|PHPT1|29085|phosphohistidine phosphatase 1##BC024648|PHPT1|29085|phosphohistidine phosphatase 1##AF164795|PHPT1|29085|phosphohistidine phosphatase 1##AM393672|PHPT1|29085|phosphohistidine phosphatase 1##AF393504|PHPT1|29085|phosphohistidine phosphatase 1##CR533481|PHPT1|29085|phosphohistidine phosphatase 1##AF131857|PHPT1|29085|phosphohistidine phosphatase 1##AF285119|PHPT1|29085|phosphohistidine phosphatase 1##BT009863|EDF1|8721|endothelial differentiation-related factor 1##CR541914|EDF1|8721|endothelial differentiation-related factor 1##DQ891577|EDF1|8721|endothelial differentiation-related factor 1##DQ894770|EDF1|8721|endothelial differentiation-related factor 1##AB002282|EDF1|8721|endothelial differentiation-related factor 1##AB002283|EDF1|8721|endothelial differentiation-related factor 1##BC015500|EDF1|8721|endothelial differentiation-related factor 1##NM_003792|EDF1|8721|endothelial differentiation-related factor 1##NM_153200|EDF1|8721|endothelial differentiation-related factor 1##BX538160|TRAF2|7186|TNF receptor-associated factor 2##BC043492|TRAF2|7186|TNF receptor-associated factor 2##NM_021138|TRAF2|7186|TNF receptor-associated factor 2##AK222961|TRAF2|7186|TNF receptor-associated factor 2##AK294607|TRAF2|7186|TNF receptor-associated factor 2##AK298370|TRAF2|7186|TNF receptor-associated factor 2##BC033810|TRAF2|7186|TNF receptor-associated factor 2##AK054686|TRAF2|7186|TNF receptor-associated factor 2##BC032410|TRAF2|7186|TNF receptor-associated factor 2	0.0	
chr9	140172231	140172314	reg1031233.p2	3.417	+	TSC_hg19_v1_chr9_+_140149888 AF464935 AB384577 AM393289	-22349	+	TSC_hg19_v1_chr9_+_140149768 BC019029	-22473	+	TSC_hg19_v1_chr9_+_140149758 AK091056 AX746754 NM_015456	-22513	+	TSC_hg19_v1_chr9_+_140172277 AK000252 NM_017723	13	+	BC053618 NM_001004354 TSC_hg19_v1_chr9_-_140196724	24448	-	BC065002 TSC_hg19_v1_chr9_-_140317615 BC110879 AK000440 AK094438 BC039252 BC037355	145338	-	AF464935|COBRA1|25920|cofactor of BRCA1##AM393289|COBRA1|25920|cofactor of BRCA1##BC019029|COBRA1|25920|cofactor of BRCA1##AK091056|COBRA1|25920|cofactor of BRCA1##NM_015456|COBRA1|25920|cofactor of BRCA1##AK000252|C9orf167|54863|chromosome 9 open reading frame 167##NM_017723|C9orf167|54863|chromosome 9 open reading frame 167##BC053618|NRARP|441478|NOTCH-regulated ankyrin repeat protein##NM_001004354|NRARP|441478|NOTCH-regulated ankyrin repeat protein##BC065002|EXD3|54932|exonuclease 3'-5' domain containing 3##BC110879|EXD3|54932|exonuclease 3'-5' domain containing 3##AK000440|EXD3|54932|exonuclease 3'-5' domain containing 3##AK094438|EXD3|54932|exonuclease 3'-5' domain containing 3##BC039252|EXD3|54932|exonuclease 3'-5' domain containing 3##BC037355|EXD3|54932|exonuclease 3'-5' domain containing 3	0.0	
chrY	15936812	15936902	reg1042649.p1	3.417	+	AF000989 NM_004202	-121411	+	AF000994 AF000995 AF000996 NM_007125 NM_182659 NM_182660	-344308	-	AK292858 BC071744 TSC_hg19_v1_chrY_-_15591857 BC029389 BC012581	-345024	-	CU691160 BC096729 BC104154 BC056508 NM_181880 AF000979 NM_004679	161498	-	AF000979 NM_004679 BC056508 NM_181880 BC096729 BC104154 CU691160	231276	+	NM_001206850 AB023168	697702	+	AF000989|TMSB4Y|9087|thymosin beta 4, Y-linked##NM_004202|TMSB4Y|9087|thymosin beta 4, Y-linked##AF000994|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked##AF000995|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked##AF000996|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked##NM_007125|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked##NM_182659|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked##NM_182660|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked##AK292858|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked##BC071744|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked##BC029389|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked##BC012581|UTY|7404|ubiquitously transcribed tetratricopeptide repeat gene, Y-linked##BC096729|VCY|9084|variable charge, Y-linked##BC104154|VCX3A|51481|variable charge, X-linked 3A##BC056508|VCY1B|353513|variable charge, Y-linked 1B##NM_181880|VCY1B|353513|variable charge, Y-linked 1B##AF000979|VCY|9084|variable charge, Y-linked##NM_004679|VCY|9084|variable charge, Y-linked##AF000979|VCY|9084|variable charge, Y-linked##NM_004679|VCY|9084|variable charge, Y-linked##BC056508|VCY1B|353513|variable charge, Y-linked 1B##NM_181880|VCY1B|353513|variable charge, Y-linked 1B##BC096729|VCY|9084|variable charge, Y-linked##BC104154|VCX3A|51481|variable charge, X-linked 3A##NM_001206850|NLGN4Y|22829|neuroligin 4, Y-linked##AB023168|NLGN4Y|22829|neuroligin 4, Y-linked	0.147798	
chr11	117480922	117481087	reg1035802.p2	3.416	+	AK302991 BC000602 TSC_hg19_v1_chr11_+_117198865 AK303067	-282173	+	TSC_hg19_v1_chr11_+_117198594 BX648682 NM_014956 BC054015	-282420	+	TSC_hg19_v1_chr11_-_117186973 AF324837 AB032975 AF201468 AF190725 BC036084 AK075049 BC065492 NM_012104 NM_138971 NM_138972 NM_138973	-294024	-	AB385430 AF304304 AF304305 TSC_hg19_v1_chr11_-_117667909 AF334384 AB032958	186849	-	TSC_hg19_v1_chr11_-_117667943 AF491813 NM_020693	186955	-	DQ786191 U50743 AF241236 AK296195 TSC_hg19_v1_chr11_-_117695460 AK096069 BC013289 NM_001680	214430	-	AK302991|CEP164|22897|centrosomal protein 164kDa##BC000602|CEP164|22897|centrosomal protein 164kDa##AK303067|CEP164|22897|centrosomal protein 164kDa##BX648682|CEP164|22897|centrosomal protein 164kDa##NM_014956|CEP164|22897|centrosomal protein 164kDa##BC054015|CEP164|22897|centrosomal protein 164kDa##AF324837|BACE1|23621|beta-site APP-cleaving enzyme 1##AB032975|BACE1|23621|beta-site APP-cleaving enzyme 1##AF201468|BACE1|23621|beta-site APP-cleaving enzyme 1##AF190725|BACE1|23621|beta-site APP-cleaving enzyme 1##BC036084|BACE1|23621|beta-site APP-cleaving enzyme 1##AK075049|BACE1|23621|beta-site APP-cleaving enzyme 1##BC065492|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_012104|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138971|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138972|BACE1|23621|beta-site APP-cleaving enzyme 1##NM_138973|BACE1|23621|beta-site APP-cleaving enzyme 1##AF304304|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF304305|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF334384|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AB032958|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##AF491813|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##NM_020693|DSCAML1|57453|Down syndrome cell adhesion molecule like 1##DQ786191|FXYD2|486|FXYD domain containing ion transport regulator 2##U50743|FXYD2|486|FXYD domain containing ion transport regulator 2##AF241236|FXYD2|486|FXYD domain containing ion transport regulator 2##AK096069|FXYD2|486|FXYD domain containing ion transport regulator 2##BC013289|FXYD2|486|FXYD domain containing ion transport regulator 2##NM_001680|FXYD2|486|FXYD domain containing ion transport regulator 2	0.0	
chr12	48279051	48279179	reg1028418.p2	3.416	+	AB489177 AY302468 TSC_hg19_v1_chr12_-_48213687 AY321367 BC064840 AK303481 AK299292 AK225910 NM_001098416 NM_015401	-65451	-	TSC_hg19_v1_chr12_+_48167020 NM_017842 AK000496 BC065033 BC026344 AK294075 CU688010 BC011823	-112081	+	AK092448 NM_001098531	-126241	-	TSC_hg19_v1_chr12_-_48298778 J03258 BC060832 BC033465 AK225844 AK299446 AK312267 NM_000376 NM_001017535 NM_001017536	19686	-	TSC_hg19_v1_chr12_+_48357345 NM_001143841 NM_001143842 NM_001143843 NM_024056	78223	+	TSC_hg19_v1_chr12_+_48357387 AK310035 AK313698 AK299154 BC107792	78305	+	AY302468|HDAC7|51564|histone deacetylase 7##AY321367|HDAC7|51564|histone deacetylase 7##BC064840|HDAC7|51564|histone deacetylase 7##AK303481|HDAC7|51564|histone deacetylase 7##AK299292|HDAC7|51564|histone deacetylase 7##AK225910|HDAC7|51564|histone deacetylase 7##NM_001098416|HDAC7|51564|histone deacetylase 7##NM_015401|HDAC7|51564|histone deacetylase 7##NM_017842|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK000496|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC065033|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC026344|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK294075|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##BC011823|SLC48A1|55652|solute carrier family 48 (heme transporter), member 1##AK092448|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##NM_001098531|RAPGEF3|10411|Rap guanine nucleotide exchange factor (GEF) 3##J03258|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC060832|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##BC033465|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK225844|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK299446|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##AK312267|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_000376|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017535|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001017536|VDR|7421|vitamin D (1,25- dihydroxyvitamin D3) receptor##NM_001143841|TMEM106C|79022|transmembrane protein 106C##NM_001143842|TMEM106C|79022|transmembrane protein 106C##NM_001143843|TMEM106C|79022|transmembrane protein 106C##NM_024056|TMEM106C|79022|transmembrane protein 106C##AK310035|TMEM106C|79022|transmembrane protein 106C##AK313698|TMEM106C|79022|transmembrane protein 106C##AK299154|TMEM106C|79022|transmembrane protein 106C##BC107792|TMEM106C|79022|transmembrane protein 106C	0.245249	CTCF.p2:84:0.245
chr14	93532507	93532643	reg1035232.p2	3.416	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-142978	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	-143131	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-271889	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	49016	-	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	49639	-	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	118625	-	AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1	0.0	
chr19	13345806	13345927	reg1011528.p2	3.416	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-81686	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-84574	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-84727	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	271310	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	496713	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	512853	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.0	
chr19	39228154	39228293	reg1042161.p1	3.416	+	TSC_hg19_v1_chr19_-_39227632 AK125713	-601	-	AK023756 TSC_hg19_v1_chr19_+_39155341	-72948	+	TSC_hg19_v1_chr19_+_39138349 BC005033 GU987085 AB590161 CU678876 DQ431186 DQ893439 DQ896777 D89980	-89852	+	AK127398 NM_144691	6890	-	U06643 BC061588 BC073743 L07769 NM_002307	35927	-	L07769 NM_001042507 BC061588 BC073743 U06643	51628	+	AK125713|CAPN12|147968|calpain 12##BC005033|ACTN4|81|actinin, alpha 4##GU987085|ACTN4|81|actinin, alpha 4##DQ431186|ACTN4|81|actinin, alpha 4##DQ893439|ACTN4|81|actinin, alpha 4##DQ896777|ACTN4|81|actinin, alpha 4##D89980|ACTN4|81|actinin, alpha 4##AK127398|CAPN12|147968|calpain 12##NM_144691|CAPN12|147968|calpain 12##U06643|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC061588|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC073743|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##L07769|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##NM_002307|LGALS7|3963|lectin, galactoside-binding, soluble, 7##L07769|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##NM_001042507|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC061588|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##BC073743|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B##U06643|LGALS7B|653499|lectin, galactoside-binding, soluble, 7B	0.0	
chr2	182177525	182177644	reg1033626.p2	3.416	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-331757	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-331941	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-332214	+	NM_000885	144034	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	144466	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	144738	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.0	
chr2	242671919	242672099	reg1006632.p1	3.416	+	TSC_hg19_v1_chr2_+_242641311 AK289958 AK074422 NM_032329 AK300790 BC005370 BC071899 AF189286 AB527747 CU675145 CU687190 EU832330 EU832415	-30614	+	AB593140 TSC_hg19_v1_chr2_+_242626482	-45533	+	TSC_hg19_v1_chr2_-_242626231 AK223434 BC147006 BC147010 BC171894 BC171902 BC171903 NM_001165031 NM_012145	-45706	-	TSC_hg19_v1_chr2_+_242674044 AK304764 AK094149 BC071598 NM_152783 AK091725 AK304773 AX747146 BC036604	2032	+	AB040610 NM_022134 BC117293 BC117295	44271	+	NM_001167600 NM_001167601 TSC_hg19_v1_chr2_+_242750226	78187	+	AK289958|ING5|84289|inhibitor of growth family, member 5##AK074422|ING5|84289|inhibitor of growth family, member 5##NM_032329|ING5|84289|inhibitor of growth family, member 5##BC005370|ING5|84289|inhibitor of growth family, member 5##BC071899|ING5|84289|inhibitor of growth family, member 5##AF189286|ING5|84289|inhibitor of growth family, member 5##AK223434|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC147006|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC147010|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171894|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171902|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##BC171903|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##NM_001165031|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##NM_012145|DTYMK|1841|deoxythymidylate kinase (thymidylate kinase)##AK304764|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK094149|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##BC071598|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##NM_152783|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK091725|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AK304773|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##BC036604|D2HGDH|728294|D-2-hydroxyglutarate dehydrogenase##AB040610|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##NM_022134|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##BC117293|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##BC117295|GAL3ST2|64090|galactose-3-O-sulfotransferase 2##NM_001167600|NEU4|129807|sialidase 4##NM_001167601|NEU4|129807|sialidase 4	0.0	
chr4	142175628	142175711	reg1044046.p1	3.416	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-33583	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-33614	+	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	-121138	-	AK290619 NM_000585 NM_172175 BC018149 U14407	382097	+	NM_001101669 NM_003866	1591934	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	1930395	+	AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38	0.892083	CTCF.p2:15:0.892
chr5	71708319	71708422	reg1019680.p2	3.416	+	TSC_hg19_v1_chr5_+_71616221 BC018720 AK303639	-92148	+	AK303776 TSC_hg19_v1_chr5_+_71616202 AK056761 NM_024754 AK298750	-92168	+	TSC_hg19_v1_chr5_-_71616075 AK300111 NM_015084	-92290	-	BC121053 BC121054 BX647592 BC029955 AK097115 NM_152625	94813	-	NM_002270 TSC_hg19_v1_chr5_+_72112487 AK299671 U70322 AK301021 AK308177 BC040340 AB528475	404120	+	NM_153188 TSC_hg19_v1_chr5_+_72143947	435571	+	BC018720|PTCD2|79810|pentatricopeptide repeat domain 2##AK303639|PTCD2|79810|pentatricopeptide repeat domain 2##AK303776|PTCD2|79810|pentatricopeptide repeat domain 2##AK056761|PTCD2|79810|pentatricopeptide repeat domain 2##NM_024754|PTCD2|79810|pentatricopeptide repeat domain 2##AK298750|PTCD2|79810|pentatricopeptide repeat domain 2##AK300111|MRPS27|23107|mitochondrial ribosomal protein S27##NM_015084|MRPS27|23107|mitochondrial ribosomal protein S27##BC121053|ZNF366|167465|zinc finger protein 366##BC121054|ZNF366|167465|zinc finger protein 366##BX647592|ZNF366|167465|zinc finger protein 366##BC029955|ZNF366|167465|zinc finger protein 366##AK097115|ZNF366|167465|zinc finger protein 366##NM_152625|ZNF366|167465|zinc finger protein 366##NM_002270|TNPO1|3842|transportin 1##AK299671|TNPO1|3842|transportin 1##U70322|TNPO1|3842|transportin 1##AK301021|TNPO1|3842|transportin 1##AK308177|TNPO1|3842|transportin 1##BC040340|TNPO1|3842|transportin 1##NM_153188|TNPO1|3842|transportin 1	0.0	
chr8	103801454	103801579	reg1036949.p1	3.416	+	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	-133584	-	BC011538 NM_001032282 S81439	-135424	-	NM_024410 AK315276 BC104456 BC104457	-237655	+	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	74843	-	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	74879	-	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	231751	+	AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1##BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1	0.0	
chrX	70834839	70834985	reg1034230.p1	3.416	+	NM_052957	-37039	+	TSC_hg19_v1_chrX_+_70765496 AL050366	-69390	+	TSC_hg19_v1_chrX_+_70752953 AK026724 AK300267 BX537844 BC038180 BC014434	-81949	+	AY242128 CU689880 DQ892460 DQ895673 BC034403 AF469635 AK313679 NM_001142797 NM_001504 X95876	3420	-	NM_001145139 NM_001145140	103222	-	NM_001145139 NM_001145140	148227	+	NM_052957|ACRC|93953|acidic repeat containing##AL050366|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##AK300267|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BX537844|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BC038180|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##BC014434|OGT|8473|O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)##AY242128|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ892460|CXCR3|2833|chemokine (C-X-C motif) receptor 3##DQ895673|CXCR3|2833|chemokine (C-X-C motif) receptor 3##BC034403|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AF469635|CXCR3|2833|chemokine (C-X-C motif) receptor 3##AK313679|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001142797|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001504|CXCR3|2833|chemokine (C-X-C motif) receptor 3##X95876|CXCR3|2833|chemokine (C-X-C motif) receptor 3##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49##NM_001145139|CXorf49B|100132994|chromosome X open reading frame 49B##NM_001145140|CXorf49|100130361|chromosome X open reading frame 49	0.0	
chr11	19454996	19455152	reg1037616.p2	3.415	+	AB063115 NM_001111018 AJ488205	-82759	+	AB231781 AB231782 AB231783 AK292688 TSC_hg19_v1_chr11_-_19263201	-191873	-	TSC_hg19_v1_chr11_-_19262479 AK055206 BC108700 BC126400 BC126402 NM_024680	-192599	-	TSC_hg19_v1_chr11_+_19734821 AB037840 BC150290 NM_001244963 NM_145117 NM_182964 AB063116	279792	+	TSC_hg19_v1_chr11_+_20044396 AK298346 AJ488208	589314	+	TSC_hg19_v1_chr11_+_20049136 AK307574	594058	+	AB063115|NAV2|89797|neuron navigator 2##NM_001111018|NAV2|89797|neuron navigator 2##AJ488205|NAV2|89797|neuron navigator 2##AB231781|E2F8|79733|E2F transcription factor 8##AK292688|E2F8|79733|E2F transcription factor 8##AK055206|E2F8|79733|E2F transcription factor 8##BC108700|E2F8|79733|E2F transcription factor 8##BC126400|E2F8|79733|E2F transcription factor 8##BC126402|E2F8|79733|E2F transcription factor 8##NM_024680|E2F8|79733|E2F transcription factor 8##AB037840|NAV2|89797|neuron navigator 2##BC150290|NAV2|89797|neuron navigator 2##NM_001244963|NAV2|89797|neuron navigator 2##NM_145117|NAV2|89797|neuron navigator 2##NM_182964|NAV2|89797|neuron navigator 2##AB063116|NAV2|89797|neuron navigator 2##AK298346|NAV2|89797|neuron navigator 2##AJ488208|NAV2|89797|neuron navigator 2##AK307574|NAV2|89797|neuron navigator 2	0.0	
chr1	204336020	204336132	reg1046968.p1	3.415	+	AB023186 BC152475 NM_014935 TSC_hg19_v1_chr1_-_204329058	-7026	-	CU691306 TSC_hg19_v1_chr1_-_204183117 AB075871 BC058832 AK124645 NM_198447	-152949	-	AF218017 BC022819 AK291695 NM_002256 TSC_hg19_v1_chr1_-_204165620	-170495	-	TSC_hg19_v1_chr1_+_204380508 BC009873	44445	+	TSC_hg19_v1_chr1_-_204380946 BC065280 AK222877 NM_032833 AK027650 AK303535 AK316092	44864	-	BC132876 BC136645 BC144342 NM_002646 AK308153	123422	-	AB023186|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##BC152475|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##NM_014935|PLEKHA6|22874|pleckstrin homology domain containing, family A member 6##AB075871|GOLT1A|127845|golgi transport 1A##BC058832|GOLT1A|127845|golgi transport 1A##AK124645|GOLT1A|127845|golgi transport 1A##NM_198447|GOLT1A|127845|golgi transport 1A##AF218017|KISS1|3814|KiSS-1 metastasis-suppressor##BC022819|KISS1|3814|KiSS-1 metastasis-suppressor##AK291695|KISS1|3814|KiSS-1 metastasis-suppressor##NM_002256|KISS1|3814|KiSS-1 metastasis-suppressor##BC065280|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK222877|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_032833|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK027650|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK303535|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##BC132876|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC136645|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC144342|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_002646|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AK308153|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide	0.969364	CTCF.p2:13:0.969
chr12	102270890	102271014	reg1031523.p1	3.415	+	AK056137 TSC_hg19_v1_chr12_-_102224637 BC131787 BC071687 AY687932 BC002779 BC094884 AM085438 NM_024312	-46366	-	AF492003 AF517774 BC062662 AK125930 NM_001177948 NM_001177949 NM_153694	-137733	-	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	-179330	+	TSC_hg19_v1_chr12_+_102271152 NM_018370 BC018435	166	+	TSC_hg19_v1_chr12_+_102271468 AK297785 AK094923 CU676248	506	+	AB587430 CR457171 CU679841 TSC_hg19_v1_chr12_-_102455761	184798	-	AK056137|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC131787|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC071687|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AY687932|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC002779|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##BC094884|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AM085438|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##NM_024312|GNPTAB|79158|N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits##AF492003|SYCP3|50511|synaptonemal complex protein 3##AF517774|SYCP3|50511|synaptonemal complex protein 3##BC062662|SYCP3|50511|synaptonemal complex protein 3##AK125930|SYCP3|50511|synaptonemal complex protein 3##NM_001177948|SYCP3|50511|synaptonemal complex protein 3##NM_001177949|SYCP3|50511|synaptonemal complex protein 3##NM_153694|SYCP3|50511|synaptonemal complex protein 3##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1##NM_018370|DRAM1|55332|DNA-damage regulated autophagy modulator 1##BC018435|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK297785|DRAM1|55332|DNA-damage regulated autophagy modulator 1##AK094923|DRAM1|55332|DNA-damage regulated autophagy modulator 1##CR457171|CCDC53|51019|coiled-coil domain containing 53	0.0	
chr1	28499207	28499324	reg1026245.p1	3.415	+	TSC_hg19_v1_chr1_-_28415116 BC041667 AK289805 BC029500 BX648945 AK295745 AK303664 AK298129 DQ426872 NM_001990	-84141	-	TSC_hg19_v1_chr1_+_28286505 AK026024 NM_018053 BC013379 BC028564 AY534246	-212747	+	NM_001009568 NM_014474 AK301349 AK293566 AK316500 TSC_hg19_v1_chr1_+_28261539 BC014444 Y08134 AK293489	-237704	+	NM_000952 NM_001164723	4189	-	S52624 AK292053 NM_001164721 NM_001164722	21147	-	TSC_hg19_v1_chr1_-_28559538 BC033159 AK300797 AF083190 BX538122 CR456900 NM_014280	60266	-	BC041667|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK289805|EYA3|2140|eyes absent homolog 3 (Drosophila)##BC029500|EYA3|2140|eyes absent homolog 3 (Drosophila)##BX648945|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK295745|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK303664|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK298129|EYA3|2140|eyes absent homolog 3 (Drosophila)##DQ426872|EYA3|2140|eyes absent homolog 3 (Drosophila)##NM_001990|EYA3|2140|eyes absent homolog 3 (Drosophila)##AK026024|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_018053|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC013379|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##BC028564|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##AY534246|XKR8|55113|XK, Kell blood group complex subunit-related family, member 8##NM_001009568|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_014474|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK301349|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293566|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK316500|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##BC014444|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##Y08134|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##AK293489|SMPDL3B|27293|sphingomyelin phosphodiesterase, acid-like 3B##NM_000952|PTAFR|5724|platelet-activating factor receptor##NM_001164723|PTAFR|5724|platelet-activating factor receptor##S52624|PTAFR|5724|platelet-activating factor receptor##AK292053|PTAFR|5724|platelet-activating factor receptor##NM_001164721|PTAFR|5724|platelet-activating factor receptor##NM_001164722|PTAFR|5724|platelet-activating factor receptor##BC033159|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AK300797|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##AF083190|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##BX538122|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##CR456900|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8##NM_014280|DNAJC8|22826|DnaJ (Hsp40) homolog, subfamily C, member 8	0.0	
chr16	10881423	10881517	reg1044468.p1	3.415	+	TSC_hg19_v1_chr16_+_10837699 AK310089 NM_002484 AK307148 AK223204 BC100290 BC109322 BC109323	-43766	+	HQ258441 BC130336 BC130338 AK057433 NM_144674	-92705	-	TSC_hg19_v1_chr16_-_10674469 AK123602 BC009687 AK313134 NM_001424	-206980	-	BC146882 BC146886 BC171807 BC171816 BC171817 BC171819 BC050569 AK124106 TSC_hg19_v1_chr16_-_10912528 NM_001079512 AK294418	31078	-	AF410154 U18259 TSC_hg19_v1_chr16_+_10971058 AY084055 NM_000246 BC007406 BC007430 AY084054 U18288 X74301 U31931	89642	+	BC071683 TSC_hg19_v1_chr16_-_11036171	154696	-	AK310089|NUBP1|4682|nucleotide binding protein 1##NM_002484|NUBP1|4682|nucleotide binding protein 1##AK307148|NUBP1|4682|nucleotide binding protein 1##AK223204|NUBP1|4682|nucleotide binding protein 1##BC100290|NUBP1|4682|nucleotide binding protein 1##BC109322|NUBP1|4682|nucleotide binding protein 1##BC109323|NUBP1|4682|nucleotide binding protein 1##HQ258441|TEKT5|146279|tektin 5##BC130336|TEKT5|146279|tektin 5##BC130338|TEKT5|146279|tektin 5##AK057433|TEKT5|146279|tektin 5##NM_144674|TEKT5|146279|tektin 5##AK123602|EMP2|2013|epithelial membrane protein 2##BC009687|EMP2|2013|epithelial membrane protein 2##AK313134|EMP2|2013|epithelial membrane protein 2##NM_001424|EMP2|2013|epithelial membrane protein 2##BC146882|FAM18A|780776|family with sequence similarity 18, member A##BC146886|FAM18A|780776|family with sequence similarity 18, member A##BC171816|FAM18A|780776|family with sequence similarity 18, member A##BC171819|FAM18A|780776|family with sequence similarity 18, member A##BC050569|FAM18A|780776|family with sequence similarity 18, member A##AK124106|FAM18A|780776|family with sequence similarity 18, member A##NM_001079512|FAM18A|780776|family with sequence similarity 18, member A##AK294418|FAM18A|780776|family with sequence similarity 18, member A##AF410154|CIITA|4261|class II, major histocompatibility complex, transactivator##U18259|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084055|CIITA|4261|class II, major histocompatibility complex, transactivator##NM_000246|CIITA|4261|class II, major histocompatibility complex, transactivator##AY084054|CIITA|4261|class II, major histocompatibility complex, transactivator##U18288|CIITA|4261|class II, major histocompatibility complex, transactivator##X74301|CIITA|4261|class II, major histocompatibility complex, transactivator##U31931|CIITA|4261|class II, major histocompatibility complex, transactivator##BC071683|DEXI|28955|Dexi homolog (mouse)	0.0	
chr16	12642524	12642618	reg1038994.p2	3.415	+	TSC_hg19_v1_chr16_+_12070608 AK022425 NM_032167 AK097928	-571998	+	NM_001192 Z29575 EF152354 BC058291 TSC_hg19_v1_chr16_+_12059066 EF152355 AY684975 Z14954 AB528957 EF152353 EF152356	-583487	+	NM_001130007	-632053	-	AY553877 CU675335 TSC_hg19_v1_chr16_-_12897670 AK298662	255080	-	AK022710 AK225359 TSC_hg19_v1_chr16_-_12897745 BX640805 AK002013 BC006289 AK093854 AK225617 NM_001099455 NM_018340	255148	-	TSC_hg19_v1_chr16_+_12995482 AK299610 NM_001145204 NM_001145205	352897	+	AK022425|SNX29|92017|sorting nexin 29##NM_032167|SNX29|92017|sorting nexin 29##AK097928|SNX29|92017|sorting nexin 29##NM_001192|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z29575|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152354|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##BC058291|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152355|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##AY684975|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##Z14954|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152353|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##EF152356|TNFRSF17|608|tumor necrosis factor receptor superfamily, member 17##NM_001130007|GSPT1|2935|G1 to S phase transition 1##AY553877|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK298662|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK022710|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225359|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BX640805|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK002013|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##BC006289|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK093854|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK225617|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_001099455|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##NM_018340|CPPED1|55313|calcineurin-like phosphoesterase domain containing 1##AK299610|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145204|SHISA9|729993|shisa homolog 9 (Xenopus laevis)##NM_001145205|SHISA9|729993|shisa homolog 9 (Xenopus laevis)	0.0	
chr18	13614108	13614175	reg1031341.p1	3.415	+	NM_001003674 NM_001003675	-2477	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	-395356	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	-622796	+	AF009426 AF009427 NM_004338 NM_181483	6725	+	TSC_hg19_v1_chr18_-_13726549 AK055618	112365	-	TSC_hg19_v1_chr18_-_13726582 AK309506 NM_001098801 NM_152352	112445	-	NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1##NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##AF009426|C18orf1|753|chromosome 18 open reading frame 1##AF009427|C18orf1|753|chromosome 18 open reading frame 1##NM_004338|C18orf1|753|chromosome 18 open reading frame 1##NM_181483|C18orf1|753|chromosome 18 open reading frame 1##AK055618|FAM210A|125228|family with sequence similarity 210, member A##AK309506|FAM210A|125228|family with sequence similarity 210, member A##NM_001098801|FAM210A|125228|family with sequence similarity 210, member A##NM_152352|FAM210A|125228|family with sequence similarity 210, member A	0.0	
chr19	13183477	13183556	reg1041956.p1	3.415	+	HQ258405 TSC_hg19_v1_chr19_+_13135832 FJ861276 U07811	-47682	+	TSC_hg19_v1_chr19_+_13135745 L31881 BC117113 BC117115	-47756	+	TSC_hg19_v1_chr19_+_13135426 BX537794 AK295290	-48119	+	TSC_hg19_v1_chr19_+_13205957 BC036885	22474	+	TSC_hg19_v1_chr19_-_13213530 AK311530 M22637	30010	-	TSC_hg19_v1_chr19_-_13213673 BC002796	30181	-	HQ258405|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##FJ861276|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##U07811|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##L31881|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117113|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC117115|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BX537794|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##AK295290|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##BC036885|NFIX|4784|nuclear factor I/X (CCAAT-binding transcription factor)##M22637|LYL1|4066|lymphoblastic leukemia derived sequence 1##BC002796|LYL1|4066|lymphoblastic leukemia derived sequence 1	0.418858	CTCF.p2:33:0.385
chr19	22728684	22728793	reg1038672.p1	3.415	+	TSC_hg19_v1_chr19_-_22605149 NM_001098626	-123612	-	NM_001242680	-259487	+	NM_001001411	-348986	-	TSC_hg19_v1_chr19_+_22817125 NM_020855 AB040906	88443	+	NM_001080409	238234	-	AK131472 TSC_hg19_v1_chr19_+_23299828	571068	+	NM_001098626|ZNF98|148198|zinc finger protein 98##NM_001242680|ZNF729|100287226|zinc finger protein 729##NM_001001411|ZNF676|163223|zinc finger protein 676##NM_020855|ZNF492|57615|zinc finger protein 492##AB040906|ZNF492|57615|zinc finger protein 492##NM_001080409|ZNF99|7652|zinc finger protein 99##AK131472|ZNF730|100129543|zinc finger protein 730	0.999484	CTCF.p2:13:0.999
chr20	25289621	25289763	reg1035289.p1	3.415	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	-60934	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	-113212	+	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	-113322	+	CU680756 AK075023 AK290815 AK293495 TSC_hg19_v1_chr20_-_25371426	81693	-	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	81834	-	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	98630	+	NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK075023|ABHD12|26090|abhydrolase domain containing 12##AK290815|ABHD12|26090|abhydrolase domain containing 12##AK293495|ABHD12|26090|abhydrolase domain containing 12##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	0.0	
chr2	25502313	25502422	reg1030465.p2	3.415	+	TSC_hg19_v1_chr2_-_25475127 AF480163 NM_153759	-27161	-	TSC_hg19_v1_chr2_-_25468920 AK025230	-33389	-	TSC_hg19_v1_chr2_-_25467080 BC023612	-35232	-	TSC_hg19_v1_chr2_-_25536762 AB527956 EU446951	34440	-	AF067972 TSC_hg19_v1_chr2_-_25564801 BC043617 NM_022552	62432	-	TSC_hg19_v1_chr2_-_25565338 BC051864 AF331856	62961	-	AF480163|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_153759|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AK025230|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC023612|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##EU446951|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF067972|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC043617|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##NM_022552|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##BC051864|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha##AF331856|DNMT3A|1788|DNA (cytosine-5-)-methyltransferase 3 alpha	0.0	
chr2	3620311	3620458	reg1038486.p1	3.415	+	TSC_hg19_v1_chr2_-_3605926 AF039652 NM_002936	-14442	-	TSC_hg19_v1_chr2_-_3605921 BC002973	-14463	-	AJ224117 BT019670 CR541820 DQ892597 DQ895824 TSC_hg19_v1_chr2_-_3605880 AF048994 AK096913 AF048995 AK075490	-14505	-	TSC_hg19_v1_chr2_-_3622741 AK125306	2395	-	TSC_hg19_v1_chr2_+_3622852 NM_001011 BC061901	2469	+	TSC_hg19_v1_chr2_+_3622901 BC002866	2515	+	AF039652|RNASEH1|246243|ribonuclease H1##NM_002936|RNASEH1|246243|ribonuclease H1##BC002973|RNASEH1|246243|ribonuclease H1##AJ224117|RNASEH1|246243|ribonuclease H1##BT019670|RNASEH1|246243|ribonuclease H1##CR541820|RNASEH1|246243|ribonuclease H1##DQ892597|RNASEH1|246243|ribonuclease H1##DQ895824|RNASEH1|246243|ribonuclease H1##AF048994|RNASEH1|246243|ribonuclease H1##AK096913|RNASEH1|246243|ribonuclease H1##AF048995|RNASEH1|246243|ribonuclease H1##AK075490|RNASEH1|246243|ribonuclease H1##NM_001011|RPS7|6201|ribosomal protein S7##BC061901|RPS7|6201|ribosomal protein S7##BC002866|RPS7|6201|ribosomal protein S7	0.0	
chr3	10183729	10183805	reg1040285.p1	3.415	+	TSC_hg19_v1_chr3_+_10183517 AB528056	-229	+	AK304002 TSC_hg19_v1_chr3_+_10183487	-269	+	L15409 NM_000551 NM_198156 TSC_hg19_v1_chr3_+_10183474 AK315799 BC058831 BC027957	-365	+	NM_001570 BC125184 AK299033 AK312841 TSC_hg19_v1_chr3_+_10206602 AF026273 AB587544 AJ496794	22833	+	TSC_hg19_v1_chr3_+_10290182 NM_014760	106408	+	TSC_hg19_v1_chr3_+_10290210 D86972	106495	+	AK304002|VHL|7428|von Hippel-Lindau tumor suppressor##L15409|VHL|7428|von Hippel-Lindau tumor suppressor##NM_000551|VHL|7428|von Hippel-Lindau tumor suppressor##NM_198156|VHL|7428|von Hippel-Lindau tumor suppressor##AK315799|VHL|7428|von Hippel-Lindau tumor suppressor##BC058831|VHL|7428|von Hippel-Lindau tumor suppressor##BC027957|VHL|7428|von Hippel-Lindau tumor suppressor##NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2##BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2##NM_014760|TATDN2|9797|TatD DNase domain containing 2##D86972|TATDN2|9797|TatD DNase domain containing 2	0.0	
chr3	27955868	27956013	reg1030830.p1	3.415	+	AK299499 TSC_hg19_v1_chr3_-_27764203 AK299695 AK297389 AK297461 AK316166	-191739	-	AB031038 BC131712 NM_005442 AB463608 BC037568	-192147	-	TSC_hg19_v1_chr3_-_27525893 AK309734	-430010	-	TSC_hg19_v1_chr3_+_28283114 CR749370 BX648671 BC052644 NM_182523	327158	+	BX648471 TSC_hg19_v1_chr3_-_28390316 AK290637 BC001139 BC001853 AK025592	434442	-	TSC_hg19_v1_chr3_-_28390539 NM_001134432 NM_001134433 NM_022461	434621	-	AK299499|EOMES|8320|eomesodermin##AK299695|EOMES|8320|eomesodermin##AK297389|EOMES|8320|eomesodermin##AK297461|EOMES|8320|eomesodermin##AK316166|EOMES|8320|eomesodermin##AB031038|EOMES|8320|eomesodermin##BC131712|EOMES|8320|eomesodermin##NM_005442|EOMES|8320|eomesodermin##BC037568|EOMES|8320|eomesodermin##AK309734|SLC4A7|9497|solute carrier family 4, sodium bicarbonate cotransporter, member 7##CR749370|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648671|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BC052644|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##NM_182523|CMC1|152100|COX assembly mitochondrial protein homolog (S. cerevisiae)##BX648471|AZI2|64343|5-azacytidine induced 2##AK290637|AZI2|64343|5-azacytidine induced 2##BC001139|AZI2|64343|5-azacytidine induced 2##BC001853|AZI2|64343|5-azacytidine induced 2##AK025592|AZI2|64343|5-azacytidine induced 2##NM_001134432|AZI2|64343|5-azacytidine induced 2##NM_001134433|AZI2|64343|5-azacytidine induced 2##NM_022461|AZI2|64343|5-azacytidine induced 2	0.224197	CTCF.p2:-63:0.224
chr5	81555127	81555243	reg1040713.p2	3.415	+	TSC_hg19_v1_chr5_+_81268100 AL136912	-287087	+	AF318326 TSC_hg19_v1_chr5_+_81267992	-287195	+	TSC_hg19_v1_chr5_+_81267857 AK024016 AK225969 AK315752 NM_001131028 NM_031482 BC029268 BC004551 BC027718	-287340	+	D14530 TSC_hg19_v1_chr5_-_81574174 AK291132 AK311772 D28396 BC070221	18986	-	TSC_hg19_v1_chr5_-_81574219 NM_001025	19034	-	BC093982 BC112191 NM_001017971	45980	+	AL136912|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AF318326|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK024016|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK225969|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##AK315752|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_001131028|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##NM_031482|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC029268|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC004551|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##BC027718|ATG10|83734|ATG10 autophagy related 10 homolog (S. cerevisiae)##D14530|RPS23|6228|ribosomal protein S23##AK291132|RPS23|6228|ribosomal protein S23##AK311772|RPS23|6228|ribosomal protein S23##D28396|RPS23|6228|ribosomal protein S23##BC070221|RPS23|6228|ribosomal protein S23##NM_001025|RPS23|6228|ribosomal protein S23##BC093982|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##BC112191|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like##NM_001017971|ATP6AP1L|92270|ATPase, H+ transporting, lysosomal accessory protein 1-like	0.916345	CTCF.p2:6:0.916
chr6	7154873	7154949	reg1043051.p1	3.415	+	BX647723 TSC_hg19_v1_chr6_+_7108910	-46008	+	TSC_hg19_v1_chr6_+_7108184 AB019254 AB019351 AB019352	-46688	+	TSC_hg19_v1_chr6_+_7108025 BC111386 NM_001003698 NM_001003699 NM_001003700	-46876	+	BT007387 CR456961 AB464204 DQ892751 EU176743 TSC_hg19_v1_chr6_-_7313433 Z12830 AK075562 AK222762 AK222809 AK291550 AK312653 CR936719 BC007710 NM_003144	158535	-	AF414185 NM_001170692 NM_001170693 NM_205864 TSC_hg19_v1_chr6_-_7389974	235056	-	TSC_hg19_v1_chr6_+_7390042 AY094356 AK314467 BC006104 NM_031480 AK054568	235187	+	BX647723|RREB1|6239|ras responsive element binding protein 1##AB019254|RREB1|6239|ras responsive element binding protein 1##AB019351|RREB1|6239|ras responsive element binding protein 1##AB019352|RREB1|6239|ras responsive element binding protein 1##BC111386|RREB1|6239|ras responsive element binding protein 1##NM_001003698|RREB1|6239|ras responsive element binding protein 1##NM_001003699|RREB1|6239|ras responsive element binding protein 1##NM_001003700|RREB1|6239|ras responsive element binding protein 1##BT007387|SSR1|6745|signal sequence receptor, alpha##CR456961|SSR1|6745|signal sequence receptor, alpha##DQ892751|SSR1|6745|signal sequence receptor, alpha##EU176743|SSR1|6745|signal sequence receptor, alpha##Z12830|SSR1|6745|signal sequence receptor, alpha##AK075562|SSR1|6745|signal sequence receptor, alpha##AK222762|SSR1|6745|signal sequence receptor, alpha##AK222809|SSR1|6745|signal sequence receptor, alpha##AK291550|SSR1|6745|signal sequence receptor, alpha##AK312653|SSR1|6745|signal sequence receptor, alpha##CR936719|SSR1|6745|signal sequence receptor, alpha##BC007710|SSR1|6745|signal sequence receptor, alpha##NM_003144|SSR1|6745|signal sequence receptor, alpha##AF414185|CAGE1|285782|cancer antigen 1##NM_001170692|CAGE1|285782|cancer antigen 1##NM_001170693|CAGE1|285782|cancer antigen 1##NM_205864|CAGE1|285782|cancer antigen 1##AY094356|RIOK1|83732|RIO kinase 1 (yeast)##AK314467|RIOK1|83732|RIO kinase 1 (yeast)##BC006104|RIOK1|83732|RIO kinase 1 (yeast)##NM_031480|RIOK1|83732|RIO kinase 1 (yeast)##AK054568|RIOK1|83732|RIO kinase 1 (yeast)	0.013115	
chr6_qbl_hap6	3842010	3842121	reg1035098.p2	3.415	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr8	56798373	56798518	reg1034409.p2	3.415	+	TSC_hg19_v1_chr8_+_56792426 AK290494 BC075001 BC075002 M79321	-5925	+	TSC_hg19_v1_chr8_+_56792393 BC059394 BC068551	-6050	+	TSC_hg19_v1_chr8_+_56792383 M16038 NM_001111097 NM_002350 BC126456 BC126458	-6080	+	BC087850 BC007507 L06498 AK130961 AK311808 TSC_hg19_v1_chr8_-_56987066 AK301342 D28358 NM_001023 NM_001146227	188641	-	AB464742 BC069569 BC069590 BC106737 BC106738 NM_005372	228095	-	TSC_hg19_v1_chr8_-_57123833 U65002	325390	-	AK290494|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075001|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC075002|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M79321|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC059394|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC068551|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##M16038|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_001111097|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##NM_002350|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126456|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC126458|LYN|4067|v-yes-1 Yamaguchi sarcoma viral related oncogene homolog##BC087850|RPS20|6224|ribosomal protein S20##BC007507|RPS20|6224|ribosomal protein S20##L06498|RPS20|6224|ribosomal protein S20##AK130961|RPS20|6224|ribosomal protein S20##AK311808|RPS20|6224|ribosomal protein S20##AK301342|RPS20|6224|ribosomal protein S20##D28358|RPS20|6224|ribosomal protein S20##NM_001023|RPS20|6224|ribosomal protein S20##NM_001146227|RPS20|6224|ribosomal protein S20##BC069569|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC069590|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106737|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##BC106738|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##NM_005372|MOS|4342|v-mos Moloney murine sarcoma viral oncogene homolog##U65002|PLAG1|5324|pleiomorphic adenoma gene 1	0.210381	CTCF.p2:30:0.210
chrX	77455461	77455574	reg1033407.p1	3.415	+	AB529179 DQ891928 DQ895115 BC071649 TSC_hg19_v1_chrX_-_77395133 AF220509 BC009566 AK312579 BC010350 BC146952 BC146960 NM_015975	-60374	-	AB062432 TSC_hg19_v1_chrX_+_77359778 BC104837 BC113568 BC023234 AY423725 AB385546 CR456716 HQ258236	-95715	+	TSC_hg19_v1_chrX_+_77359756 V00572	-95761	+	BC035750 DQ131801 DQ131800 AK023929 DQ131802 NM_006639 AK313643 DQ131799	127566	-	AK096184 NM_152694	459307	-	NM_005296 AK314134	547691	+	DQ891928|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##DQ895115|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC071649|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AF220509|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC009566|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AK312579|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC010350|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146952|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##BC146960|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##NM_015975|TAF9B|51616|TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa##AB062432|PGK1|5230|phosphoglycerate kinase 1##BC104837|PGK1|5230|phosphoglycerate kinase 1##BC113568|PGK1|5230|phosphoglycerate kinase 1##BC023234|PGK1|5230|phosphoglycerate kinase 1##AY423725|PGK1|5230|phosphoglycerate kinase 1##CR456716|PGK1|5230|phosphoglycerate kinase 1##HQ258236|PGK1|5230|phosphoglycerate kinase 1##V00572|PGK1|5230|phosphoglycerate kinase 1##BC035750|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131801|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131800|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK023929|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131802|CYSLTR1|10800|cysteinyl leukotriene receptor 1##NM_006639|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK313643|CYSLTR1|10800|cysteinyl leukotriene receptor 1##DQ131799|CYSLTR1|10800|cysteinyl leukotriene receptor 1##AK096184|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_152694|ZCCHC5|203430|zinc finger, CCHC domain containing 5##NM_005296|LPAR4|2846|lysophosphatidic acid receptor 4##AK314134|LPAR4|2846|lysophosphatidic acid receptor 4	0.240787	CTCF.p2:39:0.241
chr12	104998179	104998359	reg1025695.p1	3.414	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-147182	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-147461	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-147498	+	TSC_hg19_v1_chr12_+_105153261 AF131762	155008	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	323994	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	381821	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.0	
chr12	121236164	121236230	reg1032329.p2	3.414	+	NM_000017 TSC_hg19_v1_chr12_+_121163641 BC025963 AK300645 M26393 DQ892184 DQ895378 CU693082 AB527081	-72568	+	TSC_hg19_v1_chr12_+_121148260 AK126367 BC070088	-87924	+	NM_001080533	-88367	+	AK074916 TSC_hg19_v1_chr12_-_121248688	12486	-	AY169313 TSC_hg19_v1_chr12_-_121341927 BC073910 AK291161	105767	-	TSC_hg19_v1_chr12_-_121342070 AK223590 NM_139015	105937	-	NM_000017|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##BC025963|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AK300645|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##M26393|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##DQ892184|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##DQ895378|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AB527081|ACADS|35|acyl-CoA dehydrogenase, C-2 to C-3 short chain##AK126367|UNC119B|84747|unc-119 homolog B (C. elegans)##BC070088|UNC119B|84747|unc-119 homolog B (C. elegans)##NM_001080533|UNC119B|84747|unc-119 homolog B (C. elegans)##AK074916|SPPL3|121665|signal peptide peptidase-like 3##AY169313|SPPL3|121665|signal peptide peptidase-like 3##BC073910|SPPL3|121665|signal peptide peptidase-like 3##AK291161|SPPL3|121665|signal peptide peptidase-like 3##AK223590|SPPL3|121665|signal peptide peptidase-like 3##NM_139015|SPPL3|121665|signal peptide peptidase-like 3	0.0	
chr13	51168747	51168828	reg1035360.p1	3.414	+	AJ412041 AJ412042 AJ412043 TSC_hg19_v1_chr13_+_50760088	-408734	+	TSC_hg19_v1_chr13_-_50699781 AF380424	-468972	-	AJ412023 AJ412024 AJ412025 AJ412026 AJ412038 AJ412039 AJ412054 AJ412055 AJ412056 AJ412057 AJ412058 AJ412059 AJ412060 AJ412061 AJ412062 Y15227 TSC_hg19_v1_chr13_+_50656364 BC004131 AK312167 BC020692 AK095311	-512442	+	AY357595 BC104892 BC112009 NM_198989 AK303567 AK126830	249165	-	NM_001142279 NM_024570 TSC_hg19_v1_chr13_+_51483898	315069	+	TSC_hg19_v1_chr13_+_51483905 AY764036	315117	+	AF380424|DLEU2|8847|deleted in lymphocytic leukemia 2 (non-protein coding)##AJ412023|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412024|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412061|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AJ412062|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##Y15227|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##BC020692|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AK095311|DLEU1|10301|deleted in lymphocytic leukemia 1 (non-protein coding)##AY357595|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC104892|DLEU7|220107|deleted in lymphocytic leukemia, 7##BC112009|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_198989|DLEU7|220107|deleted in lymphocytic leukemia, 7##AK126830|DLEU7|220107|deleted in lymphocytic leukemia, 7##NM_001142279|RNASEH2B|79621|ribonuclease H2, subunit B##NM_024570|RNASEH2B|79621|ribonuclease H2, subunit B##AY764036|RNASEH2B|79621|ribonuclease H2, subunit B	0.037573	
chr13	51484662	51484744	reg1044185.p1	3.414	+	BC001397 BC005088 BC007332 BC010174 TSC_hg19_v1_chr13_+_51484193	-546	+	TSC_hg19_v1_chr13_+_51483926 AK021774 AK223340 BC036744	-749	+	TSC_hg19_v1_chr13_+_51483905 AY764036	-799	+	TSC_hg19_v1_chr13_+_51796507 BC034497 NM_001242312 NM_145019 AK055269 AK096364 BC051771 AB527542 CU690842	311813	+	AX772926 NM_001101320 AM402969	430492	+	AF097645 BC039829 BC018725 BC013358 BC032386 TSC_hg19_v1_chr13_-_52027173 AK296801 AK304218	542450	-	BC001397|RNASEH2B|79621|ribonuclease H2, subunit B##BC005088|RNASEH2B|79621|ribonuclease H2, subunit B##BC007332|RNASEH2B|79621|ribonuclease H2, subunit B##BC010174|RNASEH2B|79621|ribonuclease H2, subunit B##AK021774|RNASEH2B|79621|ribonuclease H2, subunit B##AK223340|RNASEH2B|79621|ribonuclease H2, subunit B##BC036744|RNASEH2B|79621|ribonuclease H2, subunit B##AY764036|RNASEH2B|79621|ribonuclease H2, subunit B##BC034497|FAM124A|220108|family with sequence similarity 124A##NM_001242312|FAM124A|220108|family with sequence similarity 124A##NM_145019|FAM124A|220108|family with sequence similarity 124A##AK055269|FAM124A|220108|family with sequence similarity 124A##AK096364|FAM124A|220108|family with sequence similarity 124A##BC051771|FAM124A|220108|family with sequence similarity 124A##AX772926|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##NM_001101320|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AM402969|SERPINE3|647174|serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3##AF097645|INTS6|26512|integrator complex subunit 6##BC039829|INTS6|26512|integrator complex subunit 6##BC018725|INTS6|26512|integrator complex subunit 6##BC013358|INTS6|26512|integrator complex subunit 6##BC032386|INTS6|26512|integrator complex subunit 6##AK296801|INTS6|26512|integrator complex subunit 6##AK304218|INTS6|26512|integrator complex subunit 6	0.0	
chr14	52294909	52295013	reg1044053.p1	3.414	+	TSC_hg19_v1_chr14_+_52118627 BX161430 NM_152330 BC020521 AK315764 AK055545 BX647863	-176331	+	AL833158 NM_001042481	-339107	+	NM_030755 AB048246 TSC_hg19_v1_chr14_+_51706980 AK302416 BC036460 BC016769 BC050366 AK075395 BC032834 AK303134 AL080080 BC056874 AY358640 AK312905 DQ891674 DQ894860 CU690352	-588012	+	NM_001243773 NM_001243774 NM_053064 AK092371	32115	+	TSC_hg19_v1_chr14_+_52327329 AK307171	32362	+	AK001024 AK311334 TSC_hg19_v1_chr14_+_52327363	32403	+	BX161430|FRMD6|122786|FERM domain containing 6##NM_152330|FRMD6|122786|FERM domain containing 6##BC020521|FRMD6|122786|FERM domain containing 6##AK315764|FRMD6|122786|FERM domain containing 6##AK055545|FRMD6|122786|FERM domain containing 6##BX647863|FRMD6|122786|FERM domain containing 6##AL833158|FRMD6|122786|FERM domain containing 6##NM_001042481|FRMD6|122786|FERM domain containing 6##NM_030755|TMX1|81542|thioredoxin-related transmembrane protein 1##AB048246|TMX1|81542|thioredoxin-related transmembrane protein 1##BC036460|TMX1|81542|thioredoxin-related transmembrane protein 1##BC016769|TMX1|81542|thioredoxin-related transmembrane protein 1##BC050366|TMX1|81542|thioredoxin-related transmembrane protein 1##AK075395|TMX1|81542|thioredoxin-related transmembrane protein 1##BC032834|TMX1|81542|thioredoxin-related transmembrane protein 1##AK303134|TMX1|81542|thioredoxin-related transmembrane protein 1##AL080080|TMX1|81542|thioredoxin-related transmembrane protein 1##BC056874|TMX1|81542|thioredoxin-related transmembrane protein 1##AY358640|TMX1|81542|thioredoxin-related transmembrane protein 1##AK312905|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ891674|TMX1|81542|thioredoxin-related transmembrane protein 1##DQ894860|TMX1|81542|thioredoxin-related transmembrane protein 1##NM_001243773|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_001243774|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##NM_053064|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK092371|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK307171|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2##AK001024|GNG2|54331|guanine nucleotide binding protein (G protein), gamma 2	0.735678	CTCF.p2:10:0.720
chr14	70082305	70082445	reg1022609.p1	3.414	+	TSC_hg19_v1_chr14_+_70078414 AK311470 D87434	-3984	+	AK309302 NM_014734 TSC_hg19_v1_chr14_+_70078312 BC064697	-4065	+	TSC_hg19_v1_chr14_+_69951404 AK126770 NM_001161498 BC146872	-130895	+	TSC_hg19_v1_chr14_+_70233809 BX640605	151431	+	BC095420 TSC_hg19_v1_chr14_+_70233810	151435	+	TSC_hg19_v1_chr14_+_70233856 AK311805 NM_001039465 NM_006925	151459	+	D87434|KIAA0247|9766|KIAA0247##AK309302|KIAA0247|9766|KIAA0247##NM_014734|KIAA0247|9766|KIAA0247##BC064697|KIAA0247|9766|KIAA0247##AK126770|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##NM_001161498|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BC146872|PLEKHD1|400224|pleckstrin homology domain containing, family D (with coiled-coil domains) member 1##BX640605|SRSF5|6430|serine/arginine-rich splicing factor 5##BC095420|SRSF5|6430|serine/arginine-rich splicing factor 5##AK311805|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_001039465|SRSF5|6430|serine/arginine-rich splicing factor 5##NM_006925|SRSF5|6430|serine/arginine-rich splicing factor 5	0.0	
chr15	84326448	84326552	reg1034490.p1	3.414	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-3673	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-210272	+	AK309086 NM_003027 TSC_hg19_v1_chr15_+_84116127 AK307442 BC042864	-210440	+	NM_001243531	514741	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	817781	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	870972	-	AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK309086|SH3GL3|6457|SH3-domain GRB2-like 3##NM_003027|SH3GL3|6457|SH3-domain GRB2-like 3##AK307442|SH3GL3|6457|SH3-domain GRB2-like 3##BC042864|SH3GL3|6457|SH3-domain GRB2-like 3##NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73	0.974885	CTCF.p2:-10:0.975
chr16	81782590	81782681	reg1027773.p2	3.414	+	AY172689 NM_030629	-253682	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-303802	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-433985	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	30262	+	TSC_hg19_v1_chr16_+_81812901 AB208914	30267	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	30295	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr20	10621216	10621300	reg1041972.p1	3.414	+	TSC_hg19_v1_chr20_+_10415968 BC020787 BC026094 NM_001009608	-205282	+	TSC_hg19_v1_chr20_-_10414847 AF275813 BC028973 AK025741 AL157427 AK291925 AF221992 NM_170784 AK296439	-206419	-	AF221993 NM_018848	-208689	-	U77720 HQ258535 AK312722 TSC_hg19_v1_chr20_-_10654265	32946	-	BC126205 BC126207 AF028593 U61276 U73936 BC098393 TSC_hg19_v1_chr20_-_10654648 BC028007 AF003837 NM_000214	33311	-	TSC_hg19_v1_chr20_+_11871480 AK299281 NM_181443	1250191	+	BC020787|C20orf94|128710|chromosome 20 open reading frame 94##BC026094|C20orf94|128710|chromosome 20 open reading frame 94##NM_001009608|C20orf94|128710|chromosome 20 open reading frame 94##AF275813|MKKS|8195|McKusick-Kaufman syndrome##BC028973|MKKS|8195|McKusick-Kaufman syndrome##AK025741|MKKS|8195|McKusick-Kaufman syndrome##AL157427|MKKS|8195|McKusick-Kaufman syndrome##AK291925|MKKS|8195|McKusick-Kaufman syndrome##AF221992|MKKS|8195|McKusick-Kaufman syndrome##NM_170784|MKKS|8195|McKusick-Kaufman syndrome##AK296439|MKKS|8195|McKusick-Kaufman syndrome##AF221993|MKKS|8195|McKusick-Kaufman syndrome##NM_018848|MKKS|8195|McKusick-Kaufman syndrome##U77720|JAG1|182|jagged 1##HQ258535|JAG1|182|jagged 1##AK312722|JAG1|182|jagged 1##BC126205|JAG1|182|jagged 1##BC126207|JAG1|182|jagged 1##AF028593|JAG1|182|jagged 1##U61276|JAG1|182|jagged 1##U73936|JAG1|182|jagged 1##BC098393|JAG1|182|jagged 1##BC028007|JAG1|182|jagged 1##AF003837|JAG1|182|jagged 1##NM_000214|JAG1|182|jagged 1##AK299281|BTBD3|22903|BTB (POZ) domain containing 3##NM_181443|BTBD3|22903|BTB (POZ) domain containing 3	0.0	
chr2	24307600	24307686	reg1018768.p2	3.414	+	TSC_hg19_v1_chr2_-_24307204 AB590633 AY371700 BT007149 NM_001206802	-448	-	BC029459 TSC_hg19_v1_chr2_+_24299760	-7831	+	TSC_hg19_v1_chr2_+_24299729 AK092423	-7935	+	TSC_hg19_v1_chr2_-_24307733 AK297579 BC000474 BC018819 AF010309 AK223382 NM_004881 NM_147184	198	-	TSC_hg19_v1_chr2_-_24346174 BC029523 NM_199346 BC043236 AK292601	38601	-	TSC_hg19_v1_chr2_+_24346339 NM_001145710	38716	+	AY371700|TP53I3|9540|tumor protein p53 inducible protein 3##BT007149|TP53I3|9540|tumor protein p53 inducible protein 3##NM_001206802|TP53I3|9540|tumor protein p53 inducible protein 3##BC029459|LOC375190|375190|UPF0638 protein B##AK297579|TP53I3|9540|tumor protein p53 inducible protein 3##BC000474|TP53I3|9540|tumor protein p53 inducible protein 3##BC018819|TP53I3|9540|tumor protein p53 inducible protein 3##AF010309|TP53I3|9540|tumor protein p53 inducible protein 3##AK223382|TP53I3|9540|tumor protein p53 inducible protein 3##NM_004881|TP53I3|9540|tumor protein p53 inducible protein 3##NM_147184|TP53I3|9540|tumor protein p53 inducible protein 3##BC029523|PFN4|375189|profilin family, member 4##NM_199346|PFN4|375189|profilin family, member 4##BC043236|PFN4|375189|profilin family, member 4##AK292601|PFN4|375189|profilin family, member 4##NM_001145710|LOC375190|375190|UPF0638 protein B	0.011429	
chr2	30454785	30454852	reg1026942.p2	3.414	+	AL136703 BC109376 NM_030915 TSC_hg19_v1_chr2_+_30454402 AK314598 EF025586 BC126434 BC130415 AK223541 AM393065 AM393281 HQ258723 AK027232	-316	+	TSC_hg19_v1_chr2_+_30369872 AK307099 AK025730 AK311404 BC000836	-84942	+	TSC_hg19_v1_chr2_+_30369836 AF151885 AF172940 AF135161	-84985	+	TSC_hg19_v1_chr2_+_30670138 BC146817 AK296965 AK095284 AK297262 AY358702 NM_182551 BX647953 NM_001002257 AK302562 AK311294	215330	+	BC117345 BC117347 TSC_hg19_v1_chr2_-_31030296 AK308037 AK074418 BX640793 NM_144575 AK290298	575475	-	AK122747 NM_001253827	897679	-	AL136703|LBH|81606|limb bud and heart development homolog (mouse)##BC109376|LBH|81606|limb bud and heart development homolog (mouse)##NM_030915|LBH|81606|limb bud and heart development homolog (mouse)##AK314598|LBH|81606|limb bud and heart development homolog (mouse)##EF025586|LBH|81606|limb bud and heart development homolog (mouse)##BC126434|LBH|81606|limb bud and heart development homolog (mouse)##BC130415|LBH|81606|limb bud and heart development homolog (mouse)##AK223541|LBH|81606|limb bud and heart development homolog (mouse)##AM393065|LBH|81606|limb bud and heart development homolog (mouse)##AM393281|LBH|81606|limb bud and heart development homolog (mouse)##HQ258723|LBH|81606|limb bud and heart development homolog (mouse)##AK027232|LBH|81606|limb bud and heart development homolog (mouse)##AK307099|YPEL5|51646|yippee-like 5 (Drosophila)##AK025730|YPEL5|51646|yippee-like 5 (Drosophila)##BC000836|YPEL5|51646|yippee-like 5 (Drosophila)##AF151885|YPEL5|51646|yippee-like 5 (Drosophila)##AF172940|YPEL5|51646|yippee-like 5 (Drosophila)##AF135161|YPEL5|51646|yippee-like 5 (Drosophila)##BC146817|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK296965|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK095284|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK297262|LCLAT1|253558|lysocardiolipin acyltransferase 1##AY358702|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_182551|LCLAT1|253558|lysocardiolipin acyltransferase 1##BX647953|LCLAT1|253558|lysocardiolipin acyltransferase 1##NM_001002257|LCLAT1|253558|lysocardiolipin acyltransferase 1##AK302562|LCLAT1|253558|lysocardiolipin acyltransferase 1##BC117345|CAPN13|92291|calpain 13##BC117347|CAPN13|92291|calpain 13##AK308037|CAPN13|92291|calpain 13##AK074418|CAPN13|92291|calpain 13##BX640793|CAPN13|92291|calpain 13##NM_144575|CAPN13|92291|calpain 13##AK290298|CAPN13|92291|calpain 13##AK122747|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)##NM_001253827|GALNT14|79623|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14)	0.0	
chr3	114130826	114130935	reg1039632.p1	3.414	+	AF139460 NM_001164342	-28392	-	EU675310 NM_173799 AK097192 BC101288 BC101289 BC101290 BC101291	-118027	+	NM_007136 X65233	-174456	-	BC029041 NM_001164347	212172	-	AK315307 NM_001164346 TSC_hg19_v1_chr3_-_114343793	212914	-	AK225788 NM_001164344 NM_001164345	347240	-	AF139460|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164342|ZBTB20|26137|zinc finger and BTB domain containing 20##EU675310|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_173799|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##AK097192|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101288|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101289|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101290|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##BC101291|TIGIT|201633|T cell immunoreceptor with Ig and ITIM domains##NM_007136|ZNF80|7634|zinc finger protein 80##X65233|ZNF80|7634|zinc finger protein 80##BC029041|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164347|ZBTB20|26137|zinc finger and BTB domain containing 20##AK315307|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164346|ZBTB20|26137|zinc finger and BTB domain containing 20##AK225788|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164344|ZBTB20|26137|zinc finger and BTB domain containing 20##NM_001164345|ZBTB20|26137|zinc finger and BTB domain containing 20	0.446391	CTCF.p2:-7:0.446
chr4	47974133	47974199	reg1037875.p1	3.414	+	TSC_hg19_v1_chr4_-_47916595 AB181916 AK302440 AK131311 NM_152995 BC051193 AB085695	-57571	-	AF133845 BC110451 NM_006587 AK297675 AK304038 AK304466 BX648285	-134076	-	TSC_hg19_v1_chr4_+_47708352 D28417	-265812	+	M84741 NM_001142564 S42457	9323	-	AK292021 NM_000087	40794	-	X64802 TSC_hg19_v1_chr4_-_48018662	44471	-	AB181916|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AK302440|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##NM_152995|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##BC051193|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AB085695|NFXL1|152518|nuclear transcription factor, X-box binding-like 1##AF133845|CORIN|10699|corin, serine peptidase##BC110451|CORIN|10699|corin, serine peptidase##NM_006587|CORIN|10699|corin, serine peptidase##AK297675|CORIN|10699|corin, serine peptidase##AK304038|CORIN|10699|corin, serine peptidase##AK304466|CORIN|10699|corin, serine peptidase##BX648285|CORIN|10699|corin, serine peptidase##M84741|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_001142564|CNGA1|1259|cyclic nucleotide gated channel alpha 1##S42457|CNGA1|1259|cyclic nucleotide gated channel alpha 1##AK292021|CNGA1|1259|cyclic nucleotide gated channel alpha 1##NM_000087|CNGA1|1259|cyclic nucleotide gated channel alpha 1##X64802|CNGA1|1259|cyclic nucleotide gated channel alpha 1	0.0	
chr5	88638025	88638157	reg1032176.p2	3.414	+	AL833268 AL833274 NM_001131005 NM_001193347	-438197	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-452827	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-452971	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	1067448	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1132091	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1132487	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr5	91225201	91225306	reg1034446.p1	3.414	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	-546121	-	TSC_hg19_v1_chr5_+_90676181 BC043415	-549091	+	AK091866 TSC_hg19_v1_chr5_-_90610220	-615008	-	AK311143 BC042879 TSC_hg19_v1_chr5_-_92916977 BC010610 BC018089 AK095719	1691710	-	TSC_hg19_v1_chr5_+_92918927 BC017493 NM_005654	1693730	+	TSC_hg19_v1_chr5_+_92920609 BC004154 AB463944 HQ709180 HQ709181 HQ709182 HQ709183 X16155	1695415	+	BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##AK311143|FLJ42709|441094|uncharacterized LOC441094##BC042879|FLJ42709|441094|uncharacterized LOC441094##BC010610|FLJ42709|441094|uncharacterized LOC441094##BC018089|FLJ42709|441094|uncharacterized LOC441094##AK095719|FLJ42709|441094|uncharacterized LOC441094##BC017493|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##NM_005654|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##BC004154|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709180|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709181|NR2F2|7026|nuclear receptor subfamily 2, group F, member 2##HQ709182|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##HQ709183|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1##X16155|NR2F1|7025|nuclear receptor subfamily 2, group F, member 1	0.993447	CTCF.p2:-14:0.993
chr6	106047718	106047854	reg1042664.p2	3.414	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-196791	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-196828	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-196940	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	486410	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	486449	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	499018	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.0	
chr6	11825237	11825390	reg1023819.p1	3.414	+	NM_001143948 NM_032744	-46034	-	TSC_hg19_v1_chr6_+_11538493 NM_001100829	-286815	+	TSC_hg19_v1_chr6_-_11382537 BX648041 AK292682 NM_001142393	-442773	-	NM_002114	187410	+	NM_001168319 NM_001955 S56805 AK291838 AK307089 AK313914 TSC_hg19_v1_chr6_+_12290593 Y00749 AK226096 BC009720	465280	+	TSC_hg19_v1_chr6_+_12514301 D28417	688989	+	NM_001143948|C6orf105|84830|chromosome 6 open reading frame 105##NM_032744|C6orf105|84830|chromosome 6 open reading frame 105##NM_001100829|TMEM170B|100113407|transmembrane protein 170B##BX648041|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##AK292682|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_001142393|NEDD9|4739|neural precursor cell expressed, developmentally down-regulated 9##NM_002114|HIVEP1|3096|human immunodeficiency virus type I enhancer binding protein 1##NM_001168319|EDN1|1906|endothelin 1##NM_001955|EDN1|1906|endothelin 1##S56805|EDN1|1906|endothelin 1##AK291838|EDN1|1906|endothelin 1##AK307089|EDN1|1906|endothelin 1##AK313914|EDN1|1906|endothelin 1##Y00749|EDN1|1906|endothelin 1##AK226096|EDN1|1906|endothelin 1##BC009720|EDN1|1906|endothelin 1	0.0	
chr7	35769089	35769251	reg1036119.p2	3.414	+	TSC_hg19_v1_chr7_-_35734795 NM_022373	-34392	-	BC020264 TSC_hg19_v1_chr7_-_35734751 AK055708	-34431	-	TSC_hg19_v1_chr7_-_35734533 BC005091	-34574	-	NM_001011553 NM_001242956 NM_001788 TSC_hg19_v1_chr7_+_35840766 BC107718 AK290545	71540	+	TSC_hg19_v1_chr7_+_35840828 AB073389 AK223225 AK223241 AK297883 AK298453 BC025987 BX571755 S72008 BC093640 BC093642	71663	+	DQ232879 TSC_hg19_v1_chr7_+_35840853 BC067264 AK300601 AB209677	71682	+	NM_022373|HERPUD2|64224|HERPUD family member 2##BC020264|HERPUD2|64224|HERPUD family member 2##AK055708|HERPUD2|64224|HERPUD family member 2##BC005091|HERPUD2|64224|HERPUD family member 2##NM_001011553|SEPT7|989|septin 7##NM_001242956|SEPT7|989|septin 7##NM_001788|SEPT7|989|septin 7##BC107718|SEPT7|989|septin 7##AK290545|SEPT7|989|septin 7##AB073389|SEPT7|989|septin 7##AK223225|SEPT7|989|septin 7##AK223241|SEPT7|989|septin 7##AK297883|SEPT7|989|septin 7##AK298453|SEPT7|989|septin 7##BC025987|SEPT7|989|septin 7##BX571755|SEPT7|989|septin 7##S72008|SEPT7|989|septin 7##BC093640|SEPT7|989|septin 7##BC093642|SEPT7|989|septin 7##DQ232879|SEPT7|989|septin 7##BC067264|SEPT7|989|septin 7##AK300601|SEPT7|989|septin 7##AB209677|SEPT7|989|septin 7	0.0	
chr8	128830931	128830997	reg1041026.p2	3.414	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-24181	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-82474	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-82639	+	AB042405 NM_031415	1968169	-	BC003599 TSC_hg19_v1_chr8_-_130951934	2120951	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	2121042	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.324272	CTCF.p2:-107:0.324
chr8	95962199	95962299	reg1031826.p2	3.414	+	TSC_hg19_v1_chr8_-_95961604 AK315071 AF409114 AF409115 AK125880 NM_001135733 NM_033285	-592	-	TSC_hg19_v1_chr8_-_95907430 BC007015 BC020729 NM_057749	-54797	-	TSC_hg19_v1_chr8_+_95835588 BC136754 BC144396 BC144397	-126549	+	TSC_hg19_v1_chr8_+_96037224 NM_152416 BC028166 DQ891641 DQ894830 AK298631 AK301414	75055	+	TSC_hg19_v1_chr8_+_96145948 NM_024613	183696	+	TSC_hg19_v1_chr8_+_96146012 AL834473 BC011806	183759	+	AK315071|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409114|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AF409115|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##AK125880|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_001135733|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##NM_033285|TP53INP1|94241|tumor protein p53 inducible nuclear protein 1##BC007015|CCNE2|9134|cyclin E2##BC020729|CCNE2|9134|cyclin E2##NM_057749|CCNE2|9134|cyclin E2##BC136754|INTS8|55656|integrator complex subunit 8##BC144396|INTS8|55656|integrator complex subunit 8##BC144397|INTS8|55656|integrator complex subunit 8##NM_152416|C8orf38|137682|chromosome 8 open reading frame 38##BC028166|C8orf38|137682|chromosome 8 open reading frame 38##DQ891641|C8orf38|137682|chromosome 8 open reading frame 38##DQ894830|C8orf38|137682|chromosome 8 open reading frame 38##AK298631|C8orf38|137682|chromosome 8 open reading frame 38##AK301414|C8orf38|137682|chromosome 8 open reading frame 38##NM_024613|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##AL834473|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2##BC011806|PLEKHF2|79666|pleckstrin homology domain containing, family F (with FYVE domain) member 2	0.025769	
chr9	4465080	4465199	reg1026886.p2	3.414	+	TSC_hg19_v1_chr9_-_4300028 AK075059 NM_001042413	-165108	-	DQ438877 DQ438881 DQ438886 DQ438891 DQ438898 DQ438901 TSC_hg19_v1_chr9_-_4299970	-165176	-	TSC_hg19_v1_chr9_-_4299574 DQ438882 DQ438887 DQ438892 DQ438899 DQ438902	-165556	-	TSC_hg19_v1_chr9_+_4490467 NM_004170 BC033040 AB008536 U08989 AK313013 U06469 U03506 AB527299 DQ892425 DQ895639 CU689602	25298	+	TSC_hg19_v1_chr9_+_4662298 BC038108 NM_203453 AK296773 AK074672 AK128369	197172	+	AK295831 NM_001039395	201530	-	AK075059|GLIS3|169792|GLIS family zinc finger 3##NM_001042413|GLIS3|169792|GLIS family zinc finger 3##DQ438877|GLIS3|169792|GLIS family zinc finger 3##DQ438881|GLIS3|169792|GLIS family zinc finger 3##DQ438886|GLIS3|169792|GLIS family zinc finger 3##DQ438891|GLIS3|169792|GLIS family zinc finger 3##DQ438898|GLIS3|169792|GLIS family zinc finger 3##DQ438901|GLIS3|169792|GLIS family zinc finger 3##DQ438882|GLIS3|169792|GLIS family zinc finger 3##DQ438887|GLIS3|169792|GLIS family zinc finger 3##DQ438892|GLIS3|169792|GLIS family zinc finger 3##DQ438899|GLIS3|169792|GLIS family zinc finger 3##DQ438902|GLIS3|169792|GLIS family zinc finger 3##NM_004170|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC033040|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AB008536|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U08989|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##AK313013|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U06469|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##U03506|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ892425|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##DQ895639|SLC1A1|6505|solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1##BC038108|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##NM_203453|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK074672|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK128369|PPAPDC2|403313|phosphatidic acid phosphatase type 2 domain containing 2##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68	0.0	
chr9	4740560	4740655	reg1034523.p1	3.414	+	NM_001199856 AK124824	-14370	-	TSC_hg19_v1_chr9_+_4679596 AK000497 NM_017913 AK000646 AK225510 BC014133 CU680796	-60946	+	AK295831 NM_001039395	-73938	-	TSC_hg19_v1_chr9_-_4741050 AF086913 AF100785	451	-	TSC_hg19_v1_chr9_-_4741203 AB021870 DQ891660 DQ894847 AK027534 BC013771 NM_001199854 AK001951 AK001553 AK298200	566	-	TSC_hg19_v1_chr9_-_4741309 NM_001199852 NM_016282	746	-	NM_001199856|AK3|50808|adenylate kinase 3##AK124824|AK3|50808|adenylate kinase 3##AK000497|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##NM_017913|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK000646|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK225510|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##BC014133|CDC37L1|55664|cell division cycle 37 homolog (S. cerevisiae)-like 1##AK295831|C9orf68|55064|chromosome 9 open reading frame 68##NM_001039395|C9orf68|55064|chromosome 9 open reading frame 68##AF086913|AK3|50808|adenylate kinase 3##AF100785|AK3|50808|adenylate kinase 3##AB021870|AK3|50808|adenylate kinase 3##DQ891660|AK3|50808|adenylate kinase 3##DQ894847|AK3|50808|adenylate kinase 3##AK027534|AK3|50808|adenylate kinase 3##BC013771|AK3|50808|adenylate kinase 3##NM_001199854|AK3|50808|adenylate kinase 3##AK001951|AK3|50808|adenylate kinase 3##AK001553|AK3|50808|adenylate kinase 3##AK298200|AK3|50808|adenylate kinase 3##NM_001199852|AK3|50808|adenylate kinase 3##NM_016282|AK3|50808|adenylate kinase 3	0.0	
chr9	69381493	69381674	reg1007041.p1	3.414	+	AF265442 BC069006 AK293173 NM_001085457	-119029	-	NM_001085476	-179380	-	TSC_hg19_v1_chr9_+_69065493 AK311167	-316045	+	AL136793 NM_001098805	397	+	NM_001126334	797231	-	NM_001099279 NM_199244	1048147	-	AF265442|CBWD5|220869|COBW domain containing 5##BC069006|CBWD6|644019|COBW domain containing 6##AK293173|CBWD6|644019|COBW domain containing 6##NM_001085457|CBWD6|644019|COBW domain containing 6##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001098805|ANKRD20A4|728747|ankyrin repeat domain 20 family, member A4##NM_001126334|FOXD4L5|653427|forkhead box D4-like 5##NM_001099279|FOXD4L2|100036519|forkhead box D4-like 2##NM_199244|FOXD4L4|349334|forkhead box D4-like 4	0.0	
chr11	78021773	78021876	reg1029951.p2	3.413	+	AK056231 NM_020798 AK301048 AK307875 TSC_hg19_v1_chr11_+_77899953	-121899	+	TSC_hg19_v1_chr11_-_77899673 AK300320 BC036058 NM_001029859 AK095233	-122168	-	TSC_hg19_v1_chr11_+_77850827 AK124949	-170964	+	AB011143 BC152459 NM_012296	31101	-	AB018413 BC131711 TSC_hg19_v1_chr11_-_78128848	106982	-	TSC_hg19_v1_chr11_-_78128866 NM_080491	107052	-	AK056231|USP35|57558|ubiquitin specific peptidase 35##NM_020798|USP35|57558|ubiquitin specific peptidase 35##AK301048|USP35|57558|ubiquitin specific peptidase 35##AK307875|USP35|57558|ubiquitin specific peptidase 35##AK300320|KCTD21|283219|potassium channel tetramerisation domain containing 21##BC036058|KCTD21|283219|potassium channel tetramerisation domain containing 21##NM_001029859|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK095233|KCTD21|283219|potassium channel tetramerisation domain containing 21##AK124949|LOC100289388|100289388|uncharacterized LOC100289388##AB011143|GAB2|9846|GRB2-associated binding protein 2##BC152459|GAB2|9846|GRB2-associated binding protein 2##NM_012296|GAB2|9846|GRB2-associated binding protein 2##AB018413|GAB2|9846|GRB2-associated binding protein 2##BC131711|GAB2|9846|GRB2-associated binding protein 2##NM_080491|GAB2|9846|GRB2-associated binding protein 2	0.0	
chr1	202927760	202927899	reg1037328.p1	3.413	+	NM_001127687	-130	-	TSC_hg19_v1_chr1_-_202927466 NM_015999	-335	-	AK001484 AK058114 TSC_hg19_v1_chr1_-_202927441	-382	-	AB529197 CU676296 TSC_hg19_v1_chr1_-_202936386 AK075304 AF169481 BC018732 AF087912 AF093822 AF125533 BC000034 AK027319 AK313333 AK074654 AK223416 NM_016243 AY359026	8541	-	TSC_hg19_v1_chr1_+_202976501 AK297222	48663	+	AF070537 TSC_hg19_v1_chr1_+_202976519 AK291426 AK312985 AK309745 BC067775	48690	+	NM_001127687|ADIPOR1|51094|adiponectin receptor 1##NM_015999|ADIPOR1|51094|adiponectin receptor 1##AK001484|ADIPOR1|51094|adiponectin receptor 1##AK058114|ADIPOR1|51094|adiponectin receptor 1##AK075304|CYB5R1|51706|cytochrome b5 reductase 1##AF169481|CYB5R1|51706|cytochrome b5 reductase 1##BC018732|CYB5R1|51706|cytochrome b5 reductase 1##AF087912|CYB5R1|51706|cytochrome b5 reductase 1##AF093822|CYB5R1|51706|cytochrome b5 reductase 1##AF125533|CYB5R1|51706|cytochrome b5 reductase 1##BC000034|CYB5R1|51706|cytochrome b5 reductase 1##AK313333|CYB5R1|51706|cytochrome b5 reductase 1##AK074654|CYB5R1|51706|cytochrome b5 reductase 1##AK223416|CYB5R1|51706|cytochrome b5 reductase 1##NM_016243|CYB5R1|51706|cytochrome b5 reductase 1##AY359026|CYB5R1|51706|cytochrome b5 reductase 1##AK297222|TMEM183B|653659|transmembrane protein 183B##AF070537|TMEM183A|92703|transmembrane protein 183A##AK291426|TMEM183A|92703|transmembrane protein 183A##AK312985|TMEM183A|92703|transmembrane protein 183A##AK309745|TMEM183A|92703|transmembrane protein 183A##BC067775|TMEM183A|92703|transmembrane protein 183A	0.0	
chr12	110940020	110940136	reg1035606.p2	3.413	+	AK124109 NM_152442 AK301826 BC037353 AK302512 AY297459 BC068031 BC047645 AK097665	-3	+	TSC_hg19_v1_chr12_-_110939917 BC015095 AF201946 AF175264 BC000880 AF168716 AF193795 AK129767 BC017964 AB578891 AB618733 AL136614 BC095446 NM_016226 NM_057180 BC032462 AB578892	-168	-	TSC_hg19_v1_chr12_+_110906672 CR457001 CU676792 DQ891800 DQ894984	-33409	+	TSC_hg19_v1_chr12_-_111020755 AY357944	80715	-	TSC_hg19_v1_chr12_-_111021111 BC111551 AF385435 NM_139283	80992	-	AK124744 TSC_hg19_v1_chr12_-_111021124	81048	-	AK124109|RAD9B|144715|RAD9 homolog B (S. pombe)##NM_152442|RAD9B|144715|RAD9 homolog B (S. pombe)##AK301826|RAD9B|144715|RAD9 homolog B (S. pombe)##BC037353|RAD9B|144715|RAD9 homolog B (S. pombe)##AK302512|RAD9B|144715|RAD9 homolog B (S. pombe)##AY297459|RAD9B|144715|RAD9 homolog B (S. pombe)##BC068031|RAD9B|144715|RAD9 homolog B (S. pombe)##BC047645|RAD9B|144715|RAD9 homolog B (S. pombe)##AK097665|RAD9B|144715|RAD9 homolog B (S. pombe)##BC015095|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF201946|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF175264|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC000880|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF168716|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AF193795|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AK129767|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC017964|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578891|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB618733|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AL136614|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC095446|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_016226|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##NM_057180|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##BC032462|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##AB578892|VPS29|51699|vacuolar protein sorting 29 homolog (S. cerevisiae)##CR457001|C12orf24|29902|chromosome 12 open reading frame 24##DQ891800|C12orf24|29902|chromosome 12 open reading frame 24##DQ894984|C12orf24|29902|chromosome 12 open reading frame 24##AY357944|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##BC111551|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AF385435|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##NM_139283|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)##AK124744|PPTC7|160760|PTC7 protein phosphatase homolog (S. cerevisiae)	0.0	
chr12	64932073	64932191	reg1040380.p1	3.413	+	NM_013254 TSC_hg19_v1_chr12_+_64845917 AK291039 BC034950 AF191838	-86239	+	BC020569 Y16414 TSC_hg19_v1_chr12_+_64803772 AF039022	-128354	+	TSC_hg19_v1_chr12_+_64798240 NM_007235 AK308108 AK292884	-133886	+	TSC_hg19_v1_chr12_+_65004274 AY217662 AY217663 BC100949 BC100950 BC100951 BC100952 NM_178169	72129	+	CU680338 Z12173 TSC_hg19_v1_chr12_-_65153140	220965	-	TSC_hg19_v1_chr12_-_65153163 AK308454 AK291771	221027	-	NM_013254|TBK1|29110|TANK-binding kinase 1##AK291039|TBK1|29110|TANK-binding kinase 1##BC034950|TBK1|29110|TANK-binding kinase 1##AF191838|TBK1|29110|TANK-binding kinase 1##BC020569|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##Y16414|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AF039022|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##NM_007235|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK308108|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AK292884|XPOT|11260|exportin, tRNA (nuclear export receptor for tRNAs)##AY217662|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##AY217663|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100949|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100950|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100951|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##BC100952|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##NM_178169|RASSF3|283349|Ras association (RalGDS/AF-6) domain family member 3##Z12173|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK308454|GNS|2799|glucosamine (N-acetyl)-6-sulfatase##AK291771|GNS|2799|glucosamine (N-acetyl)-6-sulfatase	0.0	
chr1	32681469	32681649	reg1003603.p2	3.413	+	BC128073 NM_001099434 BC041458	-6864	+	NM_001160042 NM_018134 TSC_hg19_v1_chr1_+_32671269 AK223272 AK001409 AK299235 AK307853 BC098250 BC098260 BC098317 BC098366	-10292	+	AK092702 NM_024296 AK225113 BC002462 BC022848	-15333	+	TSC_hg19_v1_chr1_-_32687936 CU691608 BC004885 NM_019118 BC001256	6324	-	TSC_hg19_v1_chr1_-_32687939 AY358586	6382	-	TSC_hg19_v1_chr1_-_32687949 AK312046 AF258548 BC038842 AK295232	6402	-	BC128073|DCDC2B|149069|doublecortin domain containing 2B##NM_001099434|DCDC2B|149069|doublecortin domain containing 2B##BC041458|DCDC2B|149069|doublecortin domain containing 2B##NM_001160042|IQCC|55721|IQ motif containing C##NM_018134|IQCC|55721|IQ motif containing C##AK223272|IQCC|55721|IQ motif containing C##AK001409|IQCC|55721|IQ motif containing C##AK299235|IQCC|55721|IQ motif containing C##AK307853|IQCC|55721|IQ motif containing C##BC098250|IQCC|55721|IQ motif containing C##BC098260|IQCC|55721|IQ motif containing C##BC098317|IQCC|55721|IQ motif containing C##BC098366|IQCC|55721|IQ motif containing C##AK092702|CCDC28B|79140|coiled-coil domain containing 28B##NM_024296|CCDC28B|79140|coiled-coil domain containing 28B##AK225113|CCDC28B|79140|coiled-coil domain containing 28B##BC002462|CCDC28B|79140|coiled-coil domain containing 28B##BC022848|CCDC28B|79140|coiled-coil domain containing 28B##BC004885|TMEM234|56063|transmembrane protein 234##NM_019118|TMEM234|56063|transmembrane protein 234##BC001256|TMEM234|56063|transmembrane protein 234##AY358586|TMEM234|56063|transmembrane protein 234##AK312046|TMEM234|56063|transmembrane protein 234##AF258548|TMEM234|56063|transmembrane protein 234##BC038842|TMEM234|56063|transmembrane protein 234##AK295232|TMEM234|56063|transmembrane protein 234	0.073609	
chr13	34118137	34118205	reg1043628.p2	3.413	+	AK094704 TSC_hg19_v1_chr13_-_33924768 AK308453	-193403	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	-258304	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	-338007	-	TSC_hg19_v1_chr13_-_34250932 BX647695 NM_001243476	132764	-	NM_002915 NM_181558 TSC_hg19_v1_chr13_+_34392248	274056	+	TSC_hg19_v1_chr13_+_34392276 AK296527 BC000149 AK222572 AK312544 L07541 AB528646 DQ890955 DQ894118 BT019668	274113	+	AK094704|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308453|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BX647695|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243476|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_002915|RFC3|5983|replication factor C (activator 1) 3, 38kDa##NM_181558|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK296527|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BC000149|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK222572|RFC3|5983|replication factor C (activator 1) 3, 38kDa##AK312544|RFC3|5983|replication factor C (activator 1) 3, 38kDa##L07541|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ890955|RFC3|5983|replication factor C (activator 1) 3, 38kDa##DQ894118|RFC3|5983|replication factor C (activator 1) 3, 38kDa##BT019668|RFC3|5983|replication factor C (activator 1) 3, 38kDa	0.0	
chr14	64192915	64193013	reg1044350.p1	3.413	+	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	-84402	-	BX248008 NM_001008726	-84840	-	TSC_hg19_v1_chr14_-_64010089 BC056156 BC034994	-182875	-	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	1785	-	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	126731	+	NM_182913 AY061758 AK297874	487913	+	AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##BX248008|WDR89|112840|WD repeat domain 89##NM_001008726|WDR89|112840|WD repeat domain 89##BC056156|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##BC034994|PPP2R5E|5529|protein phosphatase 2, regulatory subunit B', epsilon isoform##AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2	0.0	
chr15	58702766	58702832	reg1038904.p1	3.413	+	AK300055 NM_020980 AK313214 AF016495 AB008775 BC026258	-272313	+	NM_001206897 NM_003888 NM_170696	-344679	-	CU688924 DQ891568 DQ894760 AK303057 TSC_hg19_v1_chr15_-_58357909 BC030589 AB015226	-344921	-	NM_000236 X07228 AK293324 AK309448 TSC_hg19_v1_chr15_+_58724189 D83548 BC132825 BC136495 J03895 J03540 AB528021 HQ258274	21403	+	TSC_hg19_v1_chr15_-_59041794 BC055087 BC104659	338990	-	TSC_hg19_v1_chr15_-_59041833 AK300472	339023	-	AK300055|AQP9|366|aquaporin 9##NM_020980|AQP9|366|aquaporin 9##AK313214|AQP9|366|aquaporin 9##AF016495|AQP9|366|aquaporin 9##AB008775|AQP9|366|aquaporin 9##BC026258|AQP9|366|aquaporin 9##NM_001206897|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_003888|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_170696|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ891568|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##DQ894760|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AK303057|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##BC030589|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##AB015226|ALDH1A2|8854|aldehyde dehydrogenase 1 family, member A2##NM_000236|LIPC|3990|lipase, hepatic##X07228|LIPC|3990|lipase, hepatic##AK293324|LIPC|3990|lipase, hepatic##AK309448|LIPC|3990|lipase, hepatic##D83548|LIPC|3990|lipase, hepatic##BC132825|LIPC|3990|lipase, hepatic##BC136495|LIPC|3990|lipase, hepatic##J03895|LIPC|3990|lipase, hepatic##J03540|LIPC|3990|lipase, hepatic##HQ258274|LIPC|3990|lipase, hepatic##BC055087|ADAM10|102|ADAM metallopeptidase domain 10##BC104659|ADAM10|102|ADAM metallopeptidase domain 10##AK300472|ADAM10|102|ADAM metallopeptidase domain 10	0.0	
chr16	33673454	33673634	reg1027596.p1	3.413	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-411411	+	AL133588 NM_016212	-412030	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-467946	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	12981728	-	TSC_hg19_v1_chr16_-_46655304 NM_024745	12981762	-	BC041367 BC010362 AK223218 AF191298 TSC_hg19_v1_chr16_-_46723091 AK001614 AF175265 AF186382 BC093036 AL136888	13049518	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1##NM_024745|SHCBP1|79801|SHC SH2-domain binding protein 1##BC041367|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC010362|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK223218|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF191298|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AK001614|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF175265|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AF186382|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##BC093036|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)##AL136888|VPS35|55737|vacuolar protein sorting 35 homolog (S. cerevisiae)	2.772333	CTCF.p2:9:0.670	CTCF.p2:-28:0.725	CTCF.p2:52:0.999	CTCF.p2:-87:0.339
chr17	39573868	39573978	reg1042280.p1	3.413	+	HQ448465 TSC_hg19_v1_chr17_+_39556123	-17853	+	AK313419 BC114468 NM_002277 X86570	-20104	-	NM_021013 BC041070	-35279	-	AJ786655 AB463815 NM_003770	6816	-	BC131715 NM_006771	23600	-	X81419 AB528846 NM_002278	49633	-	HQ448465|GAST|2520|gastrin##AK313419|KRT31|3881|keratin 31##BC114468|KRT31|3881|keratin 31##NM_002277|KRT31|3881|keratin 31##X86570|KRT31|3881|keratin 31##NM_021013|KRT34|3885|keratin 34##BC041070|KRT34|3885|keratin 34##AJ786655|KRT37|8688|keratin 37##NM_003770|KRT37|8688|keratin 37##BC131715|KRT38|8687|keratin 38##NM_006771|KRT38|8687|keratin 38##X81419|KRT32|3882|keratin 32##NM_002278|KRT32|3882|keratin 32	0.418211	CTCF.p2:22:0.418
chr17	61984903	61985004	reg1041589.p1	3.413	+	BT006926 J00118 BC002717 AK291587 BC005921 BC057768 BC062775 BC020756 NM_001317 M35419	-11002	-	AB451332 AB451477 AF006061 AF006060 M38451 BC020760 J03756 NM_002059 NM_022556 NM_022557 NM_022558 AK312194	-25762	-	V00573 BC119748 BC022044 BC035965 NM_020991 NM_022644 NM_022645	-33911	-	BC119747 BC029365 NM_001318 NM_022579 NM_022580 NM_022581 AX772828	3704	-	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	11213	-	S52229 S79249 X83539 M80461 BC032651 BC002975 BC030210 AX775815 AX775817 AK222954 AK313583 AK223210 NM_000626 NM_001039933 NM_021602 M89957	24713	-	BT006926|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##J00118|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC002717|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##AK291587|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC005921|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC057768|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC062775|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC020756|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##NM_001317|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##AB451332|GH2|2689|growth hormone 2##AB451477|GH2|2689|growth hormone 2##AF006061|GH2|2689|growth hormone 2##AF006060|GH2|2689|growth hormone 2##M38451|GH2|2689|growth hormone 2##BC020760|GH2|2689|growth hormone 2##J03756|GH2|2689|growth hormone 2##NM_002059|GH2|2689|growth hormone 2##NM_022556|GH2|2689|growth hormone 2##NM_022557|GH2|2689|growth hormone 2##NM_022558|GH2|2689|growth hormone 2##AK312194|GH2|2689|growth hormone 2##V00573|CSH2|1443|chorionic somatomammotropin hormone 2##BC119748|CSH2|1443|chorionic somatomammotropin hormone 2##BC022044|CSH2|1443|chorionic somatomammotropin hormone 2##BC035965|CSH2|1443|chorionic somatomammotropin hormone 2##NM_020991|CSH2|1443|chorionic somatomammotropin hormone 2##NM_022644|CSH2|1443|chorionic somatomammotropin hormone 2##NM_022645|CSH2|1443|chorionic somatomammotropin hormone 2##BC119747|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BC029365|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_001318|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022579|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022580|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022581|CSHL1|1444|chorionic somatomammotropin hormone-like 1##M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1##S52229|CD79B|974|CD79b molecule, immunoglobulin-associated beta##S79249|CD79B|974|CD79b molecule, immunoglobulin-associated beta##X83539|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M80461|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC032651|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC002975|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC030210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775815|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775817|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK222954|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK313583|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK223210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_000626|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_001039933|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_021602|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M89957|CD79B|974|CD79b molecule, immunoglobulin-associated beta	0.684104	CTCF.p2:10:0.684
chr17	72915673	72915766	reg1043547.p1	3.413	+	NM_178128 AY203929 BC117230 AK094411	-25998	-	BT006684 CU678312 AB463633 AK223530 J03826 AK098648 AK293210 AK301779 BC063493 BC002960 AK298908 AK094120 AK293208 BC018911 BC034763 BC011521 AK295307 NM_004110 NM_024417	-46608	-	BC140801 BC144586 AB208799 NM_000835	-59774	-	BC101096 BC101097 BC101098 BC101099 AK091243 AK296899 AX746872 NM_173477 AK289804	3580	-	AK000063 NM_178160	4650	+	BC143799 AB463989 NM_178233 AB593153	16175	+	NM_178128|FADS6|283985|fatty acid desaturase domain family, member 6##AY203929|FADS6|283985|fatty acid desaturase domain family, member 6##BC117230|FADS6|283985|fatty acid desaturase domain family, member 6##AK094411|FADS6|283985|fatty acid desaturase domain family, member 6##BT006684|FDXR|2232|ferredoxin reductase##AK223530|FDXR|2232|ferredoxin reductase##J03826|FDXR|2232|ferredoxin reductase##AK098648|FDXR|2232|ferredoxin reductase##AK293210|FDXR|2232|ferredoxin reductase##AK301779|FDXR|2232|ferredoxin reductase##BC063493|FDXR|2232|ferredoxin reductase##BC002960|FDXR|2232|ferredoxin reductase##AK298908|FDXR|2232|ferredoxin reductase##AK094120|FDXR|2232|ferredoxin reductase##AK293208|FDXR|2232|ferredoxin reductase##BC018911|FDXR|2232|ferredoxin reductase##BC034763|FDXR|2232|ferredoxin reductase##BC011521|FDXR|2232|ferredoxin reductase##AK295307|FDXR|2232|ferredoxin reductase##NM_004110|FDXR|2232|ferredoxin reductase##NM_024417|FDXR|2232|ferredoxin reductase##BC140801|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##BC144586|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##AB208799|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##NM_000835|GRIN2C|2905|glutamate receptor, ionotropic, N-methyl D-aspartate 2C##BC101096|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101097|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101098|USH1G|124590|Usher syndrome 1G (autosomal recessive)##BC101099|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK091243|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK296899|USH1G|124590|Usher syndrome 1G (autosomal recessive)##NM_173477|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK289804|USH1G|124590|Usher syndrome 1G (autosomal recessive)##AK000063|OTOP2|92736|otopetrin 2##NM_178160|OTOP2|92736|otopetrin 2##BC143799|OTOP3|347741|otopetrin 3##NM_178233|OTOP3|347741|otopetrin 3##AB593153|OTOP3|347741|otopetrin 3	0.643398	CTCF.p2:-9:0.643
chr19	53104400	53104529	reg1034819.p2	3.413	+	BC067346 NM_001172655	-30548	+	TSC_hg19_v1_chr19_+_53073539 NM_018260 AK001753 BC131719 BC136425 BC136426 BC054884 BC080612	-30922	+	CR749856 TSC_hg19_v1_chr19_+_53030941 NM_001039886	-73535	+	TSC_hg19_v1_chr19_-_53141603 BC032867 AK027518 NM_001105549 NM_001105550 NM_001105551 NM_001105552 NM_001105553 NM_001105554 NM_018300	37160	-	TSC_hg19_v1_chr19_-_53193740 AK289399 AK075066 NM_001242531 NM_001242538	89346	-	AK097434 NM_030972	128670	-	BC067346|ZNF701|55762|zinc finger protein 701##NM_001172655|ZNF701|55762|zinc finger protein 701##NM_018260|ZNF701|55762|zinc finger protein 701##AK001753|ZNF701|55762|zinc finger protein 701##BC131719|ZNF701|55762|zinc finger protein 701##BC136425|ZNF701|55762|zinc finger protein 701##BC136426|ZNF701|55762|zinc finger protein 701##BC054884|ZNF701|55762|zinc finger protein 701##BC080612|ZNF701|55762|zinc finger protein 701##CR749856|ZNF808|388558|zinc finger protein 808##NM_001039886|ZNF808|388558|zinc finger protein 808##BC032867|ZNF83|55769|zinc finger protein 83##AK027518|ZNF83|55769|zinc finger protein 83##NM_001105549|ZNF83|55769|zinc finger protein 83##NM_001105550|ZNF83|55769|zinc finger protein 83##NM_001105551|ZNF83|55769|zinc finger protein 83##NM_001105552|ZNF83|55769|zinc finger protein 83##NM_001105553|ZNF83|55769|zinc finger protein 83##NM_001105554|ZNF83|55769|zinc finger protein 83##NM_018300|ZNF83|55769|zinc finger protein 83##AK289399|ZNF83|55769|zinc finger protein 83##AK075066|ZNF83|55769|zinc finger protein 83##NM_001242531|ZNF83|55769|zinc finger protein 83##NM_001242538|ZNF83|55769|zinc finger protein 83##AK097434|ZNF611|81856|zinc finger protein 611##NM_030972|ZNF611|81856|zinc finger protein 611	0.795356	CTCF.p2:-22:0.795
chr2	104131063	104131180	reg1039532.p1	3.413	+	CR936735 NM_144632 CR936731 CR936732 AK129862 BC130306 BC130308 HQ258113	-752539	+	TSC_hg19_v1_chr2_+_103353393 AL832688 AK054856 BC107694 BC073844	-777739	+	AK290589 AK075376 BC006242 TSC_hg19_v1_chr2_-_103353338 AK307178 NM_032718 AK296768	-777788	-	TSC_hg19_v1_chr2_-_105467912 AK096498	1336795	-	TSC_hg19_v1_chr2_+_105471877 NM_006236	1340777	+	NM_182640 TSC_hg19_v1_chr2_+_105654526 BC036575 BC057240 AK001451 AK130078	1523393	+	CR936735|TMEM182|130827|transmembrane protein 182##NM_144632|TMEM182|130827|transmembrane protein 182##CR936731|TMEM182|130827|transmembrane protein 182##CR936732|TMEM182|130827|transmembrane protein 182##AK129862|TMEM182|130827|transmembrane protein 182##BC130306|TMEM182|130827|transmembrane protein 182##BC130308|TMEM182|130827|transmembrane protein 182##HQ258113|TMEM182|130827|transmembrane protein 182##AL832688|TMEM182|130827|transmembrane protein 182##AK054856|TMEM182|130827|transmembrane protein 182##BC107694|TMEM182|130827|transmembrane protein 182##BC073844|TMEM182|130827|transmembrane protein 182##AK290589|MFSD9|84804|major facilitator superfamily domain containing 9##AK075376|MFSD9|84804|major facilitator superfamily domain containing 9##BC006242|MFSD9|84804|major facilitator superfamily domain containing 9##AK307178|MFSD9|84804|major facilitator superfamily domain containing 9##NM_032718|MFSD9|84804|major facilitator superfamily domain containing 9##AK296768|MFSD9|84804|major facilitator superfamily domain containing 9##AK096498|LOC100506421|100506421|uncharacterized LOC100506421##NM_006236|POU3F3|5455|POU class 3 homeobox 3##NM_182640|MRPS9|64965|mitochondrial ribosomal protein S9##BC036575|MRPS9|64965|mitochondrial ribosomal protein S9##BC057240|MRPS9|64965|mitochondrial ribosomal protein S9##AK001451|MRPS9|64965|mitochondrial ribosomal protein S9##AK130078|MRPS9|64965|mitochondrial ribosomal protein S9	0.0	
chr21	44819690	44819757	reg1043419.p1	3.413	+	NM_000394 U05569 BC069528 BC113598 X14789 CU686888 HQ258067 CR407691 U66584	-230549	+	TSC_hg19_v1_chr21_-_44527681 NM_001025203 NM_001025204 NM_006758	-292039	-	AB451244 AB528900 TSC_hg19_v1_chr21_-_44527638 BC001177 BC001923 AJ627978 AL832665 BC005915 M96982 AK307560	-292098	-	TSC_hg19_v1_chr21_-_44845958 AK131076 CU691580 DQ892466 DQ895679	26266	-	TSC_hg19_v1_chr21_-_44847012 AB047786 NM_173354 BC038504	27272	-	TSC_hg19_v1_chr21_-_45079376 BC000153 AK314121 AB007131 NM_007031	259639	-	NM_000394|CRYAA|1409|crystallin, alpha A##U05569|CRYAA|1409|crystallin, alpha A##BC069528|CRYAA|1409|crystallin, alpha A##BC113598|CRYAA|1409|crystallin, alpha A##X14789|CRYAA|1409|crystallin, alpha A##HQ258067|CRYAA|1409|crystallin, alpha A##CR407691|CRYAA|1409|crystallin, alpha A##U66584|CRYAA|1409|crystallin, alpha A##NM_001025203|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_001025204|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##NM_006758|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AB451244|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001177|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC001923|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AJ627978|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AL832665|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##BC005915|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##M96982|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK307560|U2AF1|7307|U2 small nuclear RNA auxiliary factor 1##AK131076|SIK1|150094|salt-inducible kinase 1##DQ892466|SIK1|150094|salt-inducible kinase 1##DQ895679|SIK1|150094|salt-inducible kinase 1##AB047786|SIK1|150094|salt-inducible kinase 1##NM_173354|SIK1|150094|salt-inducible kinase 1##BC038504|SIK1|150094|salt-inducible kinase 1##BC000153|HSF2BP|11077|heat shock transcription factor 2 binding protein##AK314121|HSF2BP|11077|heat shock transcription factor 2 binding protein##AB007131|HSF2BP|11077|heat shock transcription factor 2 binding protein##NM_007031|HSF2BP|11077|heat shock transcription factor 2 binding protein	0.0	
chr2	233951404	233951585	reg1024954.p1	3.413	+	TSC_hg19_v1_chr2_+_233925106 U84400 BC113580 BC113582	-26378	+	NM_001017915 NM_005541 TSC_hg19_v1_chr2_+_233925051 AK298651 AK309644 AK311547 BC099920 U53470 U50041 X98429 BC027960	-26435	+	BC069151 BC107053 NM_005383	-54113	+	NM_001190266 NM_001190267 NM_017974 NM_030803 NM_198890 TSC_hg19_v1_chr2_+_234160315	208772	+	AK000897 AK123876 AK308400 BC006253 BC013411 TSC_hg19_v1_chr2_+_234160328 BC000061 AY358182 AY398617	208829	+	TSC_hg19_v1_chr2_+_234160348 AK024453 EF560734 AK001690	208863	+	U84400|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113580|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC113582|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_001017915|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##NM_005541|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK298651|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##AK309644|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC099920|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U53470|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##U50041|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##X98429|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC027960|INPP5D|3635|inositol polyphosphate-5-phosphatase, 145kDa##BC069151|NEU2|4759|sialidase 2 (cytosolic sialidase)##BC107053|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_005383|NEU2|4759|sialidase 2 (cytosolic sialidase)##NM_001190266|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_001190267|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_017974|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_030803|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##NM_198890|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK000897|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK123876|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK308400|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC006253|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC013411|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##BC000061|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY358182|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AY398617|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK024453|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##EF560734|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)##AK001690|ATG16L1|55054|ATG16 autophagy related 16-like 1 (S. cerevisiae)	0.0	
chr2	33727233	33727376	reg1040587.p1	3.413	+	TSC_hg19_v1_chr2_+_33701715 BX647990	-25608	+	NM_001139488	-25984	+	AK125551 TSC_hg19_v1_chr2_+_33661417 BC027849 NM_170672 AK292983	-65856	+	AB020653 NM_015376	11637	+	TSC_hg19_v1_chr2_-_33824353 BC136768 BC136770 BC060860 BC020907 AK300023 AK074867 NM_015475 CR936766	97041	-	TSC_hg19_v1_chr2_+_36582920 AY358371	2855658	+	BX647990|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_001139488|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK125551|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC027849|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_170672|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AK292983|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##AB020653|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##NM_015376|RASGRP3|25780|RAS guanyl releasing protein 3 (calcium and DAG-regulated)##BC136768|FAM98A|25940|family with sequence similarity 98, member A##BC136770|FAM98A|25940|family with sequence similarity 98, member A##BC060860|FAM98A|25940|family with sequence similarity 98, member A##BC020907|FAM98A|25940|family with sequence similarity 98, member A##AK300023|FAM98A|25940|family with sequence similarity 98, member A##AK074867|FAM98A|25940|family with sequence similarity 98, member A##NM_015475|FAM98A|25940|family with sequence similarity 98, member A##CR936766|FAM98A|25940|family with sequence similarity 98, member A##AY358371|CRIM1|51232|cysteine rich transmembrane BMP regulator 1 (chordin-like)	0.0	
chr3	124080812	124080908	reg1046753.p1	3.413	+	AK314126 AK311154 NM_001024660 NM_003947 AK311581 U94190 BC037924 AB384665	-267255	+	AF303889 NM_017578	-370662	-	TSC_hg19_v1_chr3_-_123680226 AL833312 AK295091 NM_022757	-400605	-	TSC_hg19_v1_chr3_+_124103674 AK131379	22763	+	NM_007064 TSC_hg19_v1_chr3_+_124303522 BC058015 AB011422	222668	+	J03626 NM_000373 TSC_hg19_v1_chr3_+_124449256	368379	+	AK314126|KALRN|8997|kalirin, RhoGEF kinase##AK311154|KALRN|8997|kalirin, RhoGEF kinase##NM_001024660|KALRN|8997|kalirin, RhoGEF kinase##NM_003947|KALRN|8997|kalirin, RhoGEF kinase##AK311581|KALRN|8997|kalirin, RhoGEF kinase##U94190|KALRN|8997|kalirin, RhoGEF kinase##BC037924|KALRN|8997|kalirin, RhoGEF kinase##AF303889|ROPN1|54763|rhophilin associated tail protein 1##NM_017578|ROPN1|54763|rhophilin associated tail protein 1##AL833312|CCDC14|64770|coiled-coil domain containing 14##AK295091|CCDC14|64770|coiled-coil domain containing 14##NM_022757|CCDC14|64770|coiled-coil domain containing 14##AK131379|KALRN|8997|kalirin, RhoGEF kinase##NM_007064|KALRN|8997|kalirin, RhoGEF kinase##BC058015|KALRN|8997|kalirin, RhoGEF kinase##AB011422|KALRN|8997|kalirin, RhoGEF kinase##J03626|UMPS|7372|uridine monophosphate synthetase##NM_000373|UMPS|7372|uridine monophosphate synthetase	0.0	
chr3	171178336	171178432	reg1035035.p2	3.413	+	AF172264 AF172265 AF172266 AF172267 AF172268 AF172269 AF172270 AF172271 AB384494 TSC_hg19_v1_chr3_-_171178208 AB011123 BC150256 BC018093 AK291056 NM_001161560 NM_001161561 NM_001161562 NM_001161563 NM_001161564 NM_001161565 NM_001161566 NM_015028	-313	-	NM_000340	-433617	-	TSC_hg19_v1_chr3_-_170744533 AK298418	-433851	-	AB209907 TSC_hg19_v1_chr3_-_171528238 BC068976 U38545 NM_001130081 NM_002662	349871	-	NM_001164436 AK026825	382764	+	TSC_hg19_v1_chr3_+_171757413 BC012204 NM_022763	579031	+	AF172264|TNIK|23043|TRAF2 and NCK interacting kinase##AF172265|TNIK|23043|TRAF2 and NCK interacting kinase##AF172266|TNIK|23043|TRAF2 and NCK interacting kinase##AF172267|TNIK|23043|TRAF2 and NCK interacting kinase##AF172268|TNIK|23043|TRAF2 and NCK interacting kinase##AF172269|TNIK|23043|TRAF2 and NCK interacting kinase##AF172270|TNIK|23043|TRAF2 and NCK interacting kinase##AF172271|TNIK|23043|TRAF2 and NCK interacting kinase##AB011123|TNIK|23043|TRAF2 and NCK interacting kinase##BC150256|TNIK|23043|TRAF2 and NCK interacting kinase##BC018093|TNIK|23043|TRAF2 and NCK interacting kinase##AK291056|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161560|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161561|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161562|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161563|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161564|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161565|TNIK|23043|TRAF2 and NCK interacting kinase##NM_001161566|TNIK|23043|TRAF2 and NCK interacting kinase##NM_015028|TNIK|23043|TRAF2 and NCK interacting kinase##NM_000340|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AK298418|SLC2A2|6514|solute carrier family 2 (facilitated glucose transporter), member 2##AB209907|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##BC068976|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##U38545|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001130081|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_002662|PLD1|5337|phospholipase D1, phosphatidylcholine-specific##NM_001164436|TMEM212|389177|transmembrane protein 212##AK026825|TMEM212|389177|transmembrane protein 212##BC012204|FNDC3B|64778|fibronectin type III domain containing 3B##NM_022763|FNDC3B|64778|fibronectin type III domain containing 3B	0.0	
chr4	38763380	38763529	reg1022624.p3	3.413	+	AF289565 TSC_hg19_v1_chr4_-_38666549	-96965	-	TSC_hg19_v1_chr4_+_38665819 NM_016531 AK313459 BC051687 BC030662 AF285837 AB024523	-97628	+	TSC_hg19_v1_chr4_+_37979032 AK303574	-784437	+	AY358300 AK292026 NM_001017388 NM_001195106 NM_001195107 NM_001195108 NM_030956	21145	-	TSC_hg19_v1_chr4_-_38806422 AL050262 NM_003263 AK292982	42965	-	TSC_hg19_v1_chr4_-_38858439 AK313618 NM_006068	94974	-	AF289565|FLJ13197|79667|uncharacterized FLJ13197##NM_016531|KLF3|51274|Kruppel-like factor 3 (basic)##AK313459|KLF3|51274|Kruppel-like factor 3 (basic)##BC051687|KLF3|51274|Kruppel-like factor 3 (basic)##BC030662|KLF3|51274|Kruppel-like factor 3 (basic)##AF285837|KLF3|51274|Kruppel-like factor 3 (basic)##AB024523|KLF3|51274|Kruppel-like factor 3 (basic)##AK303574|TBC1D1|23216|TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1##AY358300|TLR10|81793|toll-like receptor 10##AK292026|TLR10|81793|toll-like receptor 10##NM_001017388|TLR10|81793|toll-like receptor 10##NM_001195106|TLR10|81793|toll-like receptor 10##NM_001195107|TLR10|81793|toll-like receptor 10##NM_001195108|TLR10|81793|toll-like receptor 10##NM_030956|TLR10|81793|toll-like receptor 10##AL050262|TLR1|7096|toll-like receptor 1##NM_003263|TLR1|7096|toll-like receptor 1##AK292982|TLR1|7096|toll-like receptor 1##AK313618|TLR6|10333|toll-like receptor 6##NM_006068|TLR6|10333|toll-like receptor 6	0.02266	
chr4	39611130	39611234	reg1033892.p1	3.413	+	TSC_hg19_v1_chr4_+_39529635 AK056558	-81556	+	TSC_hg19_v1_chr4_-_39529187 NM_001184700 NM_001184701 NM_003359	-82007	-	TSC_hg19_v1_chr4_-_39529060 AF061016 AJ007702 BC022781 AK097930 AK297737	-82175	-	TSC_hg19_v1_chr4_-_39640486 AK023351 BC008502 NM_174921 AK307146	29374	-	NM_001111112 NM_001111113 NM_005339 TSC_hg19_v1_chr4_+_39699755 AK295846 AK315524 AK093533 AK291454 AK307130 BC022804 BC050600 AB022435 AB022436 U58522 AB527742 CU690732 EU446896	88622	+	AK098331 TSC_hg19_v1_chr4_-_39979511 BC114218	368156	-	NM_001184700|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_001184701|UGDH|7358|UDP-glucose 6-dehydrogenase##NM_003359|UGDH|7358|UDP-glucose 6-dehydrogenase##AF061016|UGDH|7358|UDP-glucose 6-dehydrogenase##AJ007702|UGDH|7358|UDP-glucose 6-dehydrogenase##BC022781|UGDH|7358|UDP-glucose 6-dehydrogenase##AK097930|UGDH|7358|UDP-glucose 6-dehydrogenase##AK297737|UGDH|7358|UDP-glucose 6-dehydrogenase##AK023351|C4orf34|201895|chromosome 4 open reading frame 34##BC008502|C4orf34|201895|chromosome 4 open reading frame 34##NM_174921|C4orf34|201895|chromosome 4 open reading frame 34##AK307146|C4orf34|201895|chromosome 4 open reading frame 34##NM_001111112|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_001111113|UBE2K|3093|ubiquitin-conjugating enzyme E2K##NM_005339|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK295846|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK315524|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK093533|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK291454|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK307130|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC022804|UBE2K|3093|ubiquitin-conjugating enzyme E2K##BC050600|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022435|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AB022436|UBE2K|3093|ubiquitin-conjugating enzyme E2K##U58522|UBE2K|3093|ubiquitin-conjugating enzyme E2K##EU446896|UBE2K|3093|ubiquitin-conjugating enzyme E2K##AK098331|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC114218|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	0.0	
chr5	86413079	86413204	reg1039580.p1	3.413	+	TSC_hg19_v1_chr5_+_85913763 BC001005 NM_001867 AK309192 BC007498 X16560 BT007098	-499324	+	TSC_hg19_v1_chr5_+_85913757 AK026505	-499383	+	TSC_hg19_v1_chr5_-_83680612 BC030828 NM_005711	-2732477	-	TSC_hg19_v1_chr5_+_86563706 CR749722	150544	+	TSC_hg19_v1_chr5_+_86563831 BC131816	150685	+	TSC_hg19_v1_chr5_+_86564085 AB209106 NM_002890 BC033015	150925	+	BC001005|COX7C|1350|cytochrome c oxidase subunit VIIc##NM_001867|COX7C|1350|cytochrome c oxidase subunit VIIc##BC007498|COX7C|1350|cytochrome c oxidase subunit VIIc##X16560|COX7C|1350|cytochrome c oxidase subunit VIIc##BT007098|COX7C|1350|cytochrome c oxidase subunit VIIc##AK026505|COX7C|1350|cytochrome c oxidase subunit VIIc##BC030828|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##NM_005711|EDIL3|10085|EGF-like repeats and discoidin I-like domains 3##CR749722|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##AB209106|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##NM_002890|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1##BC033015|RASA1|5921|RAS p21 protein activator (GTPase activating protein) 1	0.0	
chr6	116160098	116160197	reg1036861.p1	3.413	+	AF503292 NM_153612 BC093911 BC093913	-1776123	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	-1867811	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	-1867875	-	BC012916 U22322 NM_002031 U00803 TSC_hg19_v1_chr6_-_116381939 AK313314	221735	-	TSC_hg19_v1_chr6_+_116422015 NM_152729 AK308337 BC136832 BC136841 BC108699 AK290408	261862	+	AK097758 TSC_hg19_v1_chr6_-_116422450	262283	-	AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC012916|FRK|2444|fyn-related kinase##U22322|FRK|2444|fyn-related kinase##NM_002031|FRK|2444|fyn-related kinase##U00803|FRK|2444|fyn-related kinase##AK313314|FRK|2444|fyn-related kinase##NM_152729|NT5DC1|221294|5'-nucleotidase domain containing 1##AK308337|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136832|NT5DC1|221294|5'-nucleotidase domain containing 1##BC136841|NT5DC1|221294|5'-nucleotidase domain containing 1##BC108699|NT5DC1|221294|5'-nucleotidase domain containing 1##AK290408|NT5DC1|221294|5'-nucleotidase domain containing 1	0.0	
chr6	157073801	157073947	reg1027941.p1	3.413	+	AF190122 NM_015718	-1296838	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-1438251	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-1438289	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	25189	+	TSC_hg19_v1_chr6_+_157099206 AB587572	25351	+	TSC_hg19_v1_chr6_+_157099283 AF521671	25410	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.021193	
chr6	22012316	22012386	reg1036092.p2	3.413	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	-345692	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	-417979	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1477628	+	BC015850 NM_000948	285378	-	X54394 X54393 GQ305133 M58594 NM_001163558	290696	-	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	557374	+	AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1	0.0	
chr6	80246282	80246463	reg1034617.p2	3.413	+	TSC_hg19_v1_chr6_-_79944400 AK315391 AY043282 NM_001201362 NM_001201363 NM_004242 NM_138730	-301947	-	L40357 TSC_hg19_v1_chr6_-_79944391 AF401520 AF274949 BC009529	-302014	-	TSC_hg19_v1_chr6_-_79787972 AK057039 NM_017934	-458315	-	TSC_hg19_v1_chr6_-_80247114 AK299314 BX648161 BC050327 NM_001122769 NM_181714	757	-	TSC_hg19_v1_chr6_+_80341019 AF340151 NM_031469 BC109043 BC109044 AK311757 BC040489 AK074506 BC052987 BC060799 BC070059 AJ297972	94702	+	NM_001243308	333764	-	AK315391|HMGN3|9324|high mobility group nucleosomal binding domain 3##AY043282|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201362|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_001201363|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_004242|HMGN3|9324|high mobility group nucleosomal binding domain 3##NM_138730|HMGN3|9324|high mobility group nucleosomal binding domain 3##L40357|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF401520|HMGN3|9324|high mobility group nucleosomal binding domain 3##AF274949|HMGN3|9324|high mobility group nucleosomal binding domain 3##BC009529|HMGN3|9324|high mobility group nucleosomal binding domain 3##AK057039|PHIP|55023|pleckstrin homology domain interacting protein##NM_017934|PHIP|55023|pleckstrin homology domain interacting protein##AK299314|LCA5|167691|Leber congenital amaurosis 5##BX648161|LCA5|167691|Leber congenital amaurosis 5##BC050327|LCA5|167691|Leber congenital amaurosis 5##NM_001122769|LCA5|167691|Leber congenital amaurosis 5##NM_181714|LCA5|167691|Leber congenital amaurosis 5##AF340151|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_031469|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109043|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC109044|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK311757|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC040489|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AK074506|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC052987|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC060799|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##BC070059|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##AJ297972|SH3BGRL2|83699|SH3 domain binding glutamic acid-rich protein like 2##NM_001243308|C6orf7|89758|chromosome 6 open reading frame 7	0.0	
chr8	129027060	129027126	reg1035175.p1	3.413	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	-220310	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	-278603	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	-278768	+	AB042405 NM_031415	1772040	-	BC003599 TSC_hg19_v1_chr8_-_130951934	1924822	-	TSC_hg19_v1_chr8_-_130951998 BC017297 NM_016623 AK130372	1924913	-	M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AB042405|GSDMC|56169|gasdermin C##NM_031415|GSDMC|56169|gasdermin C##BC003599|FAM49B|51571|family with sequence similarity 49, member B##BC017297|FAM49B|51571|family with sequence similarity 49, member B##NM_016623|FAM49B|51571|family with sequence similarity 49, member B##AK130372|FAM49B|51571|family with sequence similarity 49, member B	0.0	
chr8	27218046	27218176	reg1029298.p1	3.413	+	L49207 TSC_hg19_v1_chr8_+_27183068 NM_173175 AB209085	-35034	+	TSC_hg19_v1_chr8_+_27183049 BC042599	-35059	+	NM_173176 TSC_hg19_v1_chr8_+_27183022	-35094	+	AK314787 U62431 NM_000742	118660	-	TSC_hg19_v1_chr8_+_27348693 AK310507 NM_001979 BC011628 AK096089 AK096770 AF233334 AF233335 AF233336 BC007708 BC013874 AK303904 AK308041 AK294065 AB590180 DQ892749 DQ895995 BT006885	130547	+	BC039442 M64722 TSC_hg19_v1_chr8_-_27472218 AY513288 BC010514 BC029972 AK301324 AK313870 AK093399	254094	-	L49207|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173175|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AB209085|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##BC042599|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##NM_173176|PTK2B|2185|PTK2B protein tyrosine kinase 2 beta##AK314787|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##U62431|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##NM_000742|CHRNA2|1135|cholinergic receptor, nicotinic, alpha 2 (neuronal)##AK310507|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##NM_001979|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC011628|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096089|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK096770|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233334|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233335|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AF233336|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC007708|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BC013874|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK303904|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK308041|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##AK294065|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ892749|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##DQ895995|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##BT006885|EPHX2|2053|epoxide hydrolase 2, cytoplasmic##M64722|CLU|1191|clusterin##AY513288|CLU|1191|clusterin##BC010514|CLU|1191|clusterin##BC029972|CLU|1191|clusterin##AK301324|CLU|1191|clusterin##AK313870|CLU|1191|clusterin##AK093399|CLU|1191|clusterin	0.0	
chr8	38662901	38663023	reg1034423.p1	3.413	+	TSC_hg19_v1_chr8_+_38644754 AF049910 AY177411	-18194	+	AK314620 NM_001122824 NM_006283 TSC_hg19_v1_chr8_+_38644722	-18240	+	AY072874 AY072875 TSC_hg19_v1_chr8_+_38614814 AK308849	-48176	+	AK098787 NM_021623 TSC_hg19_v1_chr8_+_38758793 AK296068 AK291842 AF286164	95849	+	NM_153692 AK075205 BC057765 AK300197	168747	+	AL834224 BC004878 BC109050 BC109049 AF353991 AK075027 TSC_hg19_v1_chr8_-_38854016 AK225093	191050	-	AF049910|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY177411|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK314620|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_001122824|TACC1|6867|transforming, acidic coiled-coil containing protein 1##NM_006283|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072874|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AY072875|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK308849|TACC1|6867|transforming, acidic coiled-coil containing protein 1##AK098787|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_021623|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK296068|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AK291842|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##AF286164|PLEKHA2|59339|pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2##NM_153692|HTRA4|203100|HtrA serine peptidase 4##AK075205|HTRA4|203100|HtrA serine peptidase 4##BC057765|HTRA4|203100|HtrA serine peptidase 4##AK300197|HTRA4|203100|HtrA serine peptidase 4##AL834224|TM2D2|83877|TM2 domain containing 2##BC004878|TM2D2|83877|TM2 domain containing 2##BC109050|TM2D2|83877|TM2 domain containing 2##BC109049|TM2D2|83877|TM2 domain containing 2##AF353991|TM2D2|83877|TM2 domain containing 2##AK075027|TM2D2|83877|TM2 domain containing 2##AK225093|TM2D2|83877|TM2 domain containing 2	0.047745	
chr9	132639285	132639370	reg1040650.p1	3.413	+	TSC_hg19_v1_chr9_+_132597736 BC039593 AY074877 NM_001008563	-41562	+	TSC_hg19_v1_chr9_+_132597727 BC033669	-41605	+	TSC_hg19_v1_chr9_+_132597691 NM_001110303 NM_006676	-41643	+	AB383906 TSC_hg19_v1_chr9_-_132805448 BC101755 BC143513 BC143514 BC143515 BC062463 AB011126 AF265550 AK023681	166027	-	TSC_hg19_v1_chr9_-_132805496 NM_015033	166161	-	BC039728 NM_001136557 NM_001136558 NM_020960	176657	+	BC039593|USP20|10868|ubiquitin specific peptidase 20##AY074877|USP20|10868|ubiquitin specific peptidase 20##NM_001008563|USP20|10868|ubiquitin specific peptidase 20##BC033669|USP20|10868|ubiquitin specific peptidase 20##NM_001110303|USP20|10868|ubiquitin specific peptidase 20##NM_006676|USP20|10868|ubiquitin specific peptidase 20##BC101755|FNBP1|23048|formin binding protein 1##BC143513|FNBP1|23048|formin binding protein 1##BC143514|FNBP1|23048|formin binding protein 1##BC143515|FNBP1|23048|formin binding protein 1##BC062463|FNBP1|23048|formin binding protein 1##AB011126|FNBP1|23048|formin binding protein 1##AF265550|FNBP1|23048|formin binding protein 1##AK023681|FNBP1|23048|formin binding protein 1##NM_015033|FNBP1|23048|formin binding protein 1##BC039728|GPR107|57720|G protein-coupled receptor 107##NM_001136557|GPR107|57720|G protein-coupled receptor 107##NM_001136558|GPR107|57720|G protein-coupled receptor 107##NM_020960|GPR107|57720|G protein-coupled receptor 107	0.0	
chr10	65226134	65226314	reg1041078.p2	3.412	+	BC067238 TSC_hg19_v1_chr10_-_65225775	-449	-	AK027280 EF068222 NM_032776 TSC_hg19_v1_chr10_-_65225738	-546	-	TSC_hg19_v1_chr10_+_65224979 BC007866 AK314171	-1240	+	TSC_hg19_v1_chr10_+_65281112 BC068557 NM_001001330	54891	+	TSC_hg19_v1_chr10_+_65281156 BC057832 BC010040	54938	+	TSC_hg19_v1_chr10_+_65281212 BC038724 AK289976 AY562241 CU686667	55017	+	BC067238|JMJD1C|221037|jumonji domain containing 1C##AK027280|JMJD1C|221037|jumonji domain containing 1C##EF068222|JMJD1C|221037|jumonji domain containing 1C##NM_032776|JMJD1C|221037|jumonji domain containing 1C##BC007866|LOC84989|84989|uncharacterized LOC84989##AK314171|LOC84989|84989|uncharacterized LOC84989##BC068557|REEP3|221035|receptor accessory protein 3##NM_001001330|REEP3|221035|receptor accessory protein 3##BC057832|REEP3|221035|receptor accessory protein 3##BC010040|REEP3|221035|receptor accessory protein 3##BC038724|REEP3|221035|receptor accessory protein 3##AK289976|REEP3|221035|receptor accessory protein 3##AY562241|REEP3|221035|receptor accessory protein 3	0.0	
chr1	160675318	160675413	reg1028850.p1	3.412	+	AK314244 NM_003037 BC012602	-58302	-	AK313496 TSC_hg19_v1_chr1_-_160549273 AF054815 AF054816 AF054817 AF054818 U96627 Y12632 NM_001184879 NM_001184881 NM_001184882 NM_003874	-126077	-	AB590277 CR541847 CU676492 DQ891708 DQ894872 BC020063 U82988 TSC_hg19_v1_chr1_-_160549268 AJ223324 AK296290 CR933666	-126118	-	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	6221	-	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	33699	+	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	90633	+	AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##AK313496|CD84|8832|CD84 molecule##AF054815|CD84|8832|CD84 molecule##AF054816|CD84|8832|CD84 molecule##AF054817|CD84|8832|CD84 molecule##AF054818|CD84|8832|CD84 molecule##U96627|CD84|8832|CD84 molecule##Y12632|CD84|8832|CD84 molecule##NM_001184879|CD84|8832|CD84 molecule##NM_001184881|CD84|8832|CD84 molecule##NM_001184882|CD84|8832|CD84 molecule##NM_003874|CD84|8832|CD84 molecule##CR541847|CD84|8832|CD84 molecule##DQ891708|CD84|8832|CD84 molecule##DQ894872|CD84|8832|CD84 molecule##BC020063|CD84|8832|CD84 molecule##U82988|CD84|8832|CD84 molecule##AJ223324|CD84|8832|CD84 molecule##AK296290|CD84|8832|CD84 molecule##CR933666|CD84|8832|CD84 molecule##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9	0.0	
chr15	85044000	85044102	reg1037300.p2	3.412	+	NM_001243531	-202810	+	TSC_hg19_v1_chr15_+_84322810 AF237652 NM_207517 BC128389 BC128390 AK092324 AK308845 AX747482	-721224	+	TSC_hg19_v1_chr15_+_84116176 BC035598 AF036269 AF036270 AF036271 AF036272 CU692124 X99664	-927823	+	TSC_hg19_v1_chr15_+_85144280 AK128624 BC041620 NM_001007072 NM_017894 NM_181877 AK131309 AK291224 AK000602 AY262259 AY279349	100230	+	AK090406 TSC_hg19_v1_chr15_-_85197483 AK055578	153421	-	TSC_hg19_v1_chr15_-_85197503 AF161382 AK295372 BC014115 AK027794 AK055729 AK225199	153455	-	NM_001243531|LOC100505679|100505679|uncharacterized LOC100505679##AF237652|ADAMTSL3|57188|ADAMTS-like 3##NM_207517|ADAMTSL3|57188|ADAMTS-like 3##BC128389|ADAMTSL3|57188|ADAMTS-like 3##BC128390|ADAMTSL3|57188|ADAMTS-like 3##AK092324|ADAMTSL3|57188|ADAMTS-like 3##AK308845|ADAMTSL3|57188|ADAMTS-like 3##BC035598|SH3GL3|6457|SH3-domain GRB2-like 3##AF036269|SH3GL3|6457|SH3-domain GRB2-like 3##AF036270|SH3GL3|6457|SH3-domain GRB2-like 3##AF036271|SH3GL3|6457|SH3-domain GRB2-like 3##AF036272|SH3GL3|6457|SH3-domain GRB2-like 3##X99664|SH3GL3|6457|SH3-domain GRB2-like 3##AK128624|ZSCAN2|54993|zinc finger and SCAN domain containing 2##BC041620|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_001007072|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_017894|ZSCAN2|54993|zinc finger and SCAN domain containing 2##NM_181877|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK131309|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK291224|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK000602|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY262259|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AY279349|ZSCAN2|54993|zinc finger and SCAN domain containing 2##AK090406|WDR73|84942|WD repeat domain 73##AK055578|WDR73|84942|WD repeat domain 73##AF161382|WDR73|84942|WD repeat domain 73##AK295372|WDR73|84942|WD repeat domain 73##BC014115|WDR73|84942|WD repeat domain 73##AK027794|WDR73|84942|WD repeat domain 73##AK055729|WDR73|84942|WD repeat domain 73##AK225199|WDR73|84942|WD repeat domain 73	0.024936	
chr16	72691768	72691899	reg1024504.p1	3.412	+	AK122925 NM_001160213	-485485	-	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	-485790	-	NM_001142318	-563619	-	TSC_hg19_v1_chr16_+_72699031 AK021563	7231	+	TSC_hg19_v1_chr16_-_72991733 BC029653	299872	-	TSC_hg19_v1_chr16_-_73082169 L32832 NM_006885	390388	-	AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001142318|TXNL4B|54957|thioredoxin-like 4B##BC029653|ZFHX3|463|zinc finger homeobox 3##L32832|ZFHX3|463|zinc finger homeobox 3##NM_006885|ZFHX3|463|zinc finger homeobox 3	0.0	
chr18	56164335	56164434	reg1041815.p2	3.412	+	TSC_hg19_v1_chr18_+_55888838 AF210730 AY243321	-275534	+	TSC_hg19_v1_chr18_+_55888802 AK300444	-275581	+	TSC_hg19_v1_chr18_+_55888753 NM_001144966 AY243319	-275622	+	BX647796 NM_052947	131804	-	AF316597 NM_006785 NM_173844 TSC_hg19_v1_chr18_+_56338657 AK291386	174257	+	TSC_hg19_v1_chr18_+_56338693 AF130356 BC030143	174344	+	AF210730|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243321|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AK300444|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##NM_001144966|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##AY243319|NEDD4L|23327|neural precursor cell expressed, developmentally down-regulated 4-like##BX647796|ALPK2|115701|alpha-kinase 2##NM_052947|ALPK2|115701|alpha-kinase 2##AF316597|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_006785|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##NM_173844|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AK291386|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##AF130356|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1##BC030143|MALT1|10892|mucosa associated lymphoid tissue lymphoma translocation gene 1	0.859085	CTCF.p2:-11:0.859
chr19	6528092	6528193	reg1034422.p2	3.412	+	CU675455 EU831818 EU831895 AB590868 TSC_hg19_v1_chr19_-_6502321 BC006570 AK095202 AK294102 AK295917 AK075307 BC013683 NM_006087 AK293503	-25825	-	TSC_hg19_v1_chr19_-_6481799 AK303509 BC033437 AK026410 AK225623 AK303226 NM_024898	-46359	-	NM_139161 NM_174881 AK292956 AF503290 AY358684 BC018409 AK000653	-63858	+	NM_003811 BC104805 BC104807 TSC_hg19_v1_chr19_+_6531036 AK313999 AB590869 U03398	2884	+	AB590870 BT007211 TSC_hg19_v1_chr19_-_6591039	62890	-	TSC_hg19_v1_chr19_-_6591126 BC000725 AK298467	62964	-	EU831818|TUBB4A|10382|tubulin, beta 4A class IVa##EU831895|TUBB4A|10382|tubulin, beta 4A class IVa##BC006570|TUBB4A|10382|tubulin, beta 4A class IVa##AK095202|TUBB4A|10382|tubulin, beta 4A class IVa##AK295917|TUBB4A|10382|tubulin, beta 4A class IVa##AK075307|TUBB4A|10382|tubulin, beta 4A class IVa##BC013683|TUBB4A|10382|tubulin, beta 4A class IVa##NM_006087|TUBB4A|10382|tubulin, beta 4A class IVa##AK293503|TUBB4A|10382|tubulin, beta 4A class IVa##AK303509|DENND1C|79958|DENN/MADD domain containing 1C##BC033437|DENND1C|79958|DENN/MADD domain containing 1C##AK026410|DENND1C|79958|DENN/MADD domain containing 1C##AK225623|DENND1C|79958|DENN/MADD domain containing 1C##AK303226|DENND1C|79958|DENN/MADD domain containing 1C##NM_024898|DENND1C|79958|DENN/MADD domain containing 1C##NM_139161|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_174881|CRB3|92359|crumbs homolog 3 (Drosophila)##AK292956|CRB3|92359|crumbs homolog 3 (Drosophila)##AF503290|CRB3|92359|crumbs homolog 3 (Drosophila)##AY358684|CRB3|92359|crumbs homolog 3 (Drosophila)##BC018409|CRB3|92359|crumbs homolog 3 (Drosophila)##AK000653|CRB3|92359|crumbs homolog 3 (Drosophila)##NM_003811|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104805|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BC104807|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##AK313999|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##U03398|TNFSF9|8744|tumor necrosis factor (ligand) superfamily, member 9##BT007211|CD70|970|CD70 molecule##BC000725|CD70|970|CD70 molecule##AK298467|CD70|970|CD70 molecule	0.0	
chr20	50016866	50016992	reg1030943.p1	3.412	+	BC006367 TSC_hg19_v1_chr20_-_49639664 BC046629 AK290689 NM_002237	-377272	-	TSC_hg19_v1_chr20_+_49575366 BC015939 NM_014484 AB464623 AF102544 DQ892355 DQ895546 CU677523	-441561	+	AF007875 CR456926 D86198 NM_003859 CU678969 AK289569 BC016322 TSC_hg19_v1_chr20_-_49575070 BC007073 BC008427 BC008466	-441866	-	EU887573 EU887578 AB590566 TSC_hg19_v1_chr20_-_50159239 BC136418 BC144074	142210	-	TSC_hg19_v1_chr20_-_50159271 EU887576 EU887580 NM_012340 NM_173091 U43341 U43342	142346	-	EU887574 EU887577 NM_001136021	162238	-	BC006367|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC046629|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##AK290689|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##NM_002237|KCNG1|3755|potassium voltage-gated channel, subfamily G, member 1##BC015939|MOCS3|27304|molybdenum cofactor synthesis 3##NM_014484|MOCS3|27304|molybdenum cofactor synthesis 3##AF102544|MOCS3|27304|molybdenum cofactor synthesis 3##DQ892355|MOCS3|27304|molybdenum cofactor synthesis 3##DQ895546|MOCS3|27304|molybdenum cofactor synthesis 3##AF007875|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##CR456926|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##D86198|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##NM_003859|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##AK289569|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC016322|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC007073|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008427|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##BC008466|DPM1|8813|dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit##EU887573|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887578|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC136418|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##BC144074|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887576|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887580|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_012340|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_173091|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43341|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##U43342|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887574|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##EU887577|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2##NM_001136021|NFATC2|4773|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	0.0	
chr22	36907173	36907256	reg1031904.p1	3.412	+	AK025714 AK225347 TSC_hg19_v1_chr22_-_36903088 AK315555 NM_024955 BC040351 NM_001102371	-4097	-	TSC_hg19_v1_chr22_-_36903081 BC027716 BC015726	-4156	-	TSC_hg19_v1_chr22_-_36877665 BC013726 BC050610 AF480262 NM_012473 CR456601	-29535	-	BC093686 BC101477 BC093100 TSC_hg19_v1_chr22_-_36925162	17937	-	TSC_hg19_v1_chr22_-_36925195 AK303884 BC080515 U54558 BC000328 AK300199 AK312939 BC000469 BC014912 CR456489 BC011740	17974	-	AK301284 TSC_hg19_v1_chr22_-_36925250	18020	-	AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC027716|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC015726|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC013726|TXN2|25828|thioredoxin 2##BC050610|TXN2|25828|thioredoxin 2##AF480262|TXN2|25828|thioredoxin 2##NM_012473|TXN2|25828|thioredoxin 2##CR456601|TXN2|25828|thioredoxin 2##BC093686|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##BC101477|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##BC093100|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##AK303884|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##BC080515|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##U54558|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##BC000328|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##AK300199|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##AK312939|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##BC000469|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##BC014912|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##CR456489|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D##AK301284|EIF3D|8664|eukaryotic translation initiation factor 3, subunit D	0.310619	CTCF.p2:3:0.311
chr2	74702197	74702284	reg1036452.p1	3.412	+	TSC_hg19_v1_chr2_-_74699815 BC012163 NM_053050	-2381	-	TSC_hg19_v1_chr2_-_74692541 AK313355 NM_001146158 NM_006302	-9690	-	TSC_hg19_v1_chr2_-_74692510 X87237 BC002804 BC028337 AK307991	-9728	-	HQ258495 TSC_hg19_v1_chr2_-_74710051 BC117269 BC143398 BC143399 AK075543	7820	-	TSC_hg19_v1_chr2_+_74710207 BC060805 NM_022492 BC045536 AK090520 AX746494 AK022850 AK225626 AK303105 AK303245 BC096709 BC098114 BC098365 BC099729 AK223355 AK301585 BC036017 BX648131 BC047084	7967	+	NM_032779	8116	-	BC012163|MRPL53|116540|mitochondrial ribosomal protein L53##NM_053050|MRPL53|116540|mitochondrial ribosomal protein L53##AK313355|MOGS|7841|mannosyl-oligosaccharide glucosidase##NM_001146158|MOGS|7841|mannosyl-oligosaccharide glucosidase##NM_006302|MOGS|7841|mannosyl-oligosaccharide glucosidase##X87237|MOGS|7841|mannosyl-oligosaccharide glucosidase##BC002804|MOGS|7841|mannosyl-oligosaccharide glucosidase##BC028337|MOGS|7841|mannosyl-oligosaccharide glucosidase##AK307991|MOGS|7841|mannosyl-oligosaccharide glucosidase##HQ258495|CCDC142|84865|coiled-coil domain containing 142##BC117269|CCDC142|84865|coiled-coil domain containing 142##BC143398|CCDC142|84865|coiled-coil domain containing 142##BC143399|CCDC142|84865|coiled-coil domain containing 142##AK075543|CCDC142|84865|coiled-coil domain containing 142##BC060805|TTC31|64427|tetratricopeptide repeat domain 31##NM_022492|TTC31|64427|tetratricopeptide repeat domain 31##BC045536|TTC31|64427|tetratricopeptide repeat domain 31##AK090520|TTC31|64427|tetratricopeptide repeat domain 31##AK022850|TTC31|64427|tetratricopeptide repeat domain 31##AK225626|TTC31|64427|tetratricopeptide repeat domain 31##AK303105|TTC31|64427|tetratricopeptide repeat domain 31##AK303245|TTC31|64427|tetratricopeptide repeat domain 31##BC096709|TTC31|64427|tetratricopeptide repeat domain 31##BC098114|TTC31|64427|tetratricopeptide repeat domain 31##BC098365|TTC31|64427|tetratricopeptide repeat domain 31##BC099729|TTC31|64427|tetratricopeptide repeat domain 31##AK223355|TTC31|64427|tetratricopeptide repeat domain 31##AK301585|TTC31|64427|tetratricopeptide repeat domain 31##BC036017|TTC31|64427|tetratricopeptide repeat domain 31##BX648131|TTC31|64427|tetratricopeptide repeat domain 31##BC047084|TTC31|64427|tetratricopeptide repeat domain 31##NM_032779|CCDC142|84865|coiled-coil domain containing 142	0.242549	CTCF.p2:-3:0.243
chr2	99074046	99074122	reg1034478.p2	3.412	+	TSC_hg19_v1_chr2_+_99061320 AK307823 BC028361 NM_001134224 NM_001134225 NM_001566 NM_004027 U26398 U96919	-12726	+	DQ067461 TSC_hg19_v1_chr2_+_98962901 DQ426864 DQ067459 AK308149	-111179	+	DQ426863 NM_001079878 NM_001298 DQ067460	-111451	+	HQ257887 TSC_hg19_v1_chr2_-_99224955 BC047722 NM_001008215 AK131034	150858	-	AL080115 BC025992 NM_014044 TSC_hg19_v1_chr2_+_99225051 BC091481	150966	+	TSC_hg19_v1_chr2_+_99225075 BC039078 AY017215 AK222599	150986	+	AK307823|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##BC028361|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134224|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001134225|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_001566|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##NM_004027|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U26398|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##U96919|INPP4A|3631|inositol polyphosphate-4-phosphatase, type I, 107kDa##DQ067461|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067459|CNGA3|1261|cyclic nucleotide gated channel alpha 3##AK308149|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ426863|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001079878|CNGA3|1261|cyclic nucleotide gated channel alpha 3##NM_001298|CNGA3|1261|cyclic nucleotide gated channel alpha 3##DQ067460|CNGA3|1261|cyclic nucleotide gated channel alpha 3##HQ257887|COA5|493753|cytochrome C oxidase assembly factor 5##BC047722|COA5|493753|cytochrome C oxidase assembly factor 5##NM_001008215|COA5|493753|cytochrome C oxidase assembly factor 5##AK131034|COA5|493753|cytochrome C oxidase assembly factor 5##AL080115|UNC50|25972|unc-50 homolog (C. elegans)##BC025992|UNC50|25972|unc-50 homolog (C. elegans)##NM_014044|UNC50|25972|unc-50 homolog (C. elegans)##BC091481|UNC50|25972|unc-50 homolog (C. elegans)##BC039078|UNC50|25972|unc-50 homolog (C. elegans)##AY017215|UNC50|25972|unc-50 homolog (C. elegans)##AK222599|UNC50|25972|unc-50 homolog (C. elegans)	0.0	
chr3	127541597	127541746	reg1027918.p1	3.412	+	CR456835 TSC_hg19_v1_chr3_-_127541359 AK304844 BC000551 U67963 AK315529 BC006230 NM_007283	-241	-	TSC_hg19_v1_chr3_+_127391798 NM_032548 NM_172027 BC011858 AK098738 AK130594 AB053324 AB053325 AB053326 AK315148 AF297986 CU680084	-149854	+	TSC_hg19_v1_chr3_+_127348020 BC019330 AY359096 NM_015720 BC052585 AF219137	-193639	+	TSC_hg19_v1_chr3_-_127542029 AK091314 AK310874 NM_001003794	471	-	AK307108 BX537865 TSC_hg19_v1_chr3_+_127634319	92647	+	NM_207335 AB590042 AM393308 AM393457	100231	+	CR456835|MGLL|11343|monoglyceride lipase##AK304844|MGLL|11343|monoglyceride lipase##BC000551|MGLL|11343|monoglyceride lipase##U67963|MGLL|11343|monoglyceride lipase##AK315529|MGLL|11343|monoglyceride lipase##BC006230|MGLL|11343|monoglyceride lipase##NM_007283|MGLL|11343|monoglyceride lipase##NM_032548|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##NM_172027|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC011858|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK098738|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK130594|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053324|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053325|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AB053326|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AK315148|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##AF297986|ABTB1|80325|ankyrin repeat and BTB (POZ) domain containing 1##BC019330|PODXL2|50512|podocalyxin-like 2##AY359096|PODXL2|50512|podocalyxin-like 2##NM_015720|PODXL2|50512|podocalyxin-like 2##BC052585|PODXL2|50512|podocalyxin-like 2##AF219137|PODXL2|50512|podocalyxin-like 2##AK091314|MGLL|11343|monoglyceride lipase##AK310874|MGLL|11343|monoglyceride lipase##NM_001003794|MGLL|11343|monoglyceride lipase##AK307108|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##BX537865|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##NM_207335|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393308|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12##AM393457|KBTBD12|166348|kelch repeat and BTB (POZ) domain containing 12	0.0	
chr3	194239575	194239690	reg1044325.p1	3.412	+	TSC_hg19_v1_chr3_+_194207865 AK091527	-31830	+	NM_024524	-50665	-	NM_004488	-119638	-	TSC_hg19_v1_chr3_+_194304750 AK124168	65101	+	BX647418 TSC_hg19_v1_chr3_-_194353941 HQ258241	114294	-	BC014883 TSC_hg19_v1_chr3_-_194354101 BC130297 BC144158 BC144159 BC111485 NM_001011655 NM_001166305 NM_001166306 NM_138399	114476	-	AK091527|FLJ34208|401106|uncharacterized LOC401106##NM_024524|ATP13A3|79572|ATPase type 13A3##NM_004488|GP5|2814|glycoprotein V (platelet)##BX647418|TMEM44|93109|transmembrane protein 44##HQ258241|TMEM44|93109|transmembrane protein 44##BC014883|TMEM44|93109|transmembrane protein 44##BC130297|TMEM44|93109|transmembrane protein 44##BC144158|TMEM44|93109|transmembrane protein 44##BC144159|TMEM44|93109|transmembrane protein 44##BC111485|TMEM44|93109|transmembrane protein 44##NM_001011655|TMEM44|93109|transmembrane protein 44##NM_001166305|TMEM44|93109|transmembrane protein 44##NM_001166306|TMEM44|93109|transmembrane protein 44##NM_138399|TMEM44|93109|transmembrane protein 44	0.0	
chr5	79439459	79439577	reg1037468.p1	3.412	+	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-108354	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-152560	-	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-453846	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	112367	-	NM_032567 AK098575 AK314007 AF333098 BC033798	176297	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	264335	+	BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16	0.093043	
chr6	37659641	37659821	reg1000128.p1	3.412	+	TSC_hg19_v1_chr6_-_37467691 BC104835 AF161383 NM_138493	-192035	-	TSC_hg19_v1_chr6_-_37467667 BC003515 BC108655	-192079	-	AB385274 TSC_hg19_v1_chr6_+_37403469	-256294	+	TSC_hg19_v1_chr6_-_37665660 AF478693 NM_153487	5975	-	TSC_hg19_v1_chr6_+_37787274 NM_021943	127559	+	TSC_hg19_v1_chr6_+_37787655 AK023284 BC031481 DQ891133 DQ894312	127959	+	BC104835|CCDC167|154467|coiled-coil domain containing 167##AF161383|CCDC167|154467|coiled-coil domain containing 167##NM_138493|CCDC167|154467|coiled-coil domain containing 167##BC003515|CCDC167|154467|coiled-coil domain containing 167##BC108655|CCDC167|154467|coiled-coil domain containing 167##AF478693|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_153487|MDGA1|266727|MAM domain containing glycosylphosphatidylinositol anchor 1##NM_021943|ZFAND3|60685|zinc finger, AN1-type domain 3##AK023284|ZFAND3|60685|zinc finger, AN1-type domain 3##BC031481|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ891133|ZFAND3|60685|zinc finger, AN1-type domain 3##DQ894312|ZFAND3|60685|zinc finger, AN1-type domain 3	0.0	
chrX	48769265	48769331	reg1038070.p2	3.412	+	D84454 NM_001042498	-64	-	CR450287 D88146 NM_005660 AK225508 AK290284 AK293415 AK293419 AK298484 AK299748 TSC_hg19_v1_chrX_-_48768926 BC035747 NM_001032289 AK292816	-367	-	NM_001167992 AJ973593 AJ973594 AJ973595 AJ973596 AJ973597 AJ973598 AJ973599 AJ973600 AJ973602 AJ973603 AJ973604 AJ973605 AJ973606 AJ973607 AJ973601 AB041833 AB041834 AB041835 AB041836 AB385557 CU680304 DQ892221 DQ894883	-13515	+	U77735 BC018111 AK312745 TSC_hg19_v1_chrX_-_48776302 AK290931 NM_006875	7049	-	TSC_hg19_v1_chrX_-_48814831 BC028225	45507	-	TSC_hg19_v1_chrX_-_48814870 BC009917 NM_001136157 NM_001136158 NM_017602	45576	-	D84454|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001042498|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##CR450287|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##D88146|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_005660|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK225508|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK290284|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293415|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK293419|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK298484|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK299748|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##BC035747|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001032289|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##AK292816|SLC35A2|7355|solute carrier family 35 (UDP-galactose transporter), member A2##NM_001167992|PQBP1|10084|polyglutamine binding protein 1##AJ973593|PQBP1|10084|polyglutamine binding protein 1##AJ973594|PQBP1|10084|polyglutamine binding protein 1##AJ973595|PQBP1|10084|polyglutamine binding protein 1##AJ973596|PQBP1|10084|polyglutamine binding protein 1##AJ973597|PQBP1|10084|polyglutamine binding protein 1##AJ973598|PQBP1|10084|polyglutamine binding protein 1##AJ973599|PQBP1|10084|polyglutamine binding protein 1##AJ973600|PQBP1|10084|polyglutamine binding protein 1##AJ973602|PQBP1|10084|polyglutamine binding protein 1##AJ973603|PQBP1|10084|polyglutamine binding protein 1##AJ973604|PQBP1|10084|polyglutamine binding protein 1##AJ973605|PQBP1|10084|polyglutamine binding protein 1##AJ973606|PQBP1|10084|polyglutamine binding protein 1##AJ973607|PQBP1|10084|polyglutamine binding protein 1##AJ973601|PQBP1|10084|polyglutamine binding protein 1##AB041833|PQBP1|10084|polyglutamine binding protein 1##AB041834|PQBP1|10084|polyglutamine binding protein 1##AB041835|PQBP1|10084|polyglutamine binding protein 1##AB041836|PQBP1|10084|polyglutamine binding protein 1##DQ892221|PQBP1|10084|polyglutamine binding protein 1##DQ894883|PQBP1|10084|polyglutamine binding protein 1##U77735|PIM2|11040|pim-2 oncogene##BC018111|PIM2|11040|pim-2 oncogene##AK312745|PIM2|11040|pim-2 oncogene##AK290931|PIM2|11040|pim-2 oncogene##NM_006875|PIM2|11040|pim-2 oncogene##BC028225|OTUD5|55593|OTU domain containing 5##BC009917|OTUD5|55593|OTU domain containing 5##NM_001136157|OTUD5|55593|OTU domain containing 5##NM_001136158|OTUD5|55593|OTU domain containing 5##NM_017602|OTUD5|55593|OTU domain containing 5	0.148833	
chr10	88974589	88974707	reg1039155.p2	3.411	+	TSC_hg19_v1_chr10_+_88854962 AK022978 NM_019054	-119715	+	TSC_hg19_v1_chr10_-_88854695 NM_005271	-119888	-	AK311722 TSC_hg19_v1_chr10_-_88854647 AK297456	-119995	-	BC092519 NM_001099338 AB095940	10582	+	TSC_hg19_v1_chr10_-_89102098 AK091716	127448	-	TSC_hg19_v1_chr10_-_89102128 AK309777 AK311174	127493	-	AK022978|FAM35A|54537|family with sequence similarity 35, member A##NM_019054|FAM35A|54537|family with sequence similarity 35, member A##NM_005271|GLUD1|2746|glutamate dehydrogenase 1##AK311722|GLUD1|2746|glutamate dehydrogenase 1##AK297456|GLUD1|2746|glutamate dehydrogenase 1##BC092519|FAM22A|728118|family with sequence similarity 22, member A##NM_001099338|FAM22A|728118|family with sequence similarity 22, member A##AB095940|FAM22D|728130|family with sequence similarity 22, member D##AK309777|LOC728190|728190|uncharacterized LOC728190##AK311174|LOC728190|728190|uncharacterized LOC728190	0.991693	CTCF.p2:-10:0.992
chr11	120419249	120419408	reg1041069.p1	3.411	+	TSC_hg19_v1_chr11_+_120382461 AK292726 AB231709	-36863	+	BC063117 NM_001198665 NM_015313	-211711	+	TSC_hg19_v1_chr11_+_120207054 BX648515 AK304316	-212224	+	AB384776 NM_014619 S67803	111699	+	TSC_hg19_v1_chr11_+_120894810 AK313324 NM_001130047 NM_152715 AK295673 AK295825 BC020501 AK024239 AY398644	475482	+	NM_005422	554046	+	AK292726|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AB231709|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##BC063117|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_001198665|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_015313|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##BX648515|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##AK304316|ARHGEF12|23365|Rho guanine nucleotide exchange factor (GEF) 12##NM_014619|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##S67803|GRIK4|2900|glutamate receptor, ionotropic, kainate 4##AK313324|TBCEL|219899|tubulin folding cofactor E-like##NM_001130047|TBCEL|219899|tubulin folding cofactor E-like##NM_152715|TBCEL|219899|tubulin folding cofactor E-like##AK295673|TBCEL|219899|tubulin folding cofactor E-like##BC020501|TBCEL|219899|tubulin folding cofactor E-like##AK024239|TBCEL|219899|tubulin folding cofactor E-like##AY398644|TBCEL|219899|tubulin folding cofactor E-like##NM_005422|TECTA|7007|tectorin alpha	0.141305	
chr12	58810142	58810241	reg1039143.p1	3.411	+	BC012776 NM_033276 BC115381 BC115382 TSC_hg19_v1_chr12_+_58335454	-474731	+	TSC_hg19_v1_chr12_+_58335326 BC033881 AF078164	-474855	+	NM_005730	-569445	-	AK301162 AY358295 NM_001136051	503124	-	AY505340 BC126169 BC126171 BC143960 AY358288 NM_153377 TSC_hg19_v1_chr12_-_59314272	503986	-	AK292857 TSC_hg19_v1_chr12_-_59314301	504111	-	BC012776|XRCC6BP1|91419|XRCC6 binding protein 1##NM_033276|XRCC6BP1|91419|XRCC6 binding protein 1##BC115381|XRCC6BP1|91419|XRCC6 binding protein 1##BC115382|XRCC6BP1|91419|XRCC6 binding protein 1##BC033881|XRCC6BP1|91419|XRCC6 binding protein 1##AF078164|XRCC6BP1|91419|XRCC6 binding protein 1##NM_005730|CTDSP2|10106|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2##AK301162|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358295|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_001136051|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY505340|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126169|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC126171|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##BC143960|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AY358288|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##NM_153377|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3##AK292857|LRIG3|121227|leucine-rich repeats and immunoglobulin-like domains 3	0.816178	CTCF.p2:-4:0.816
chr1	38987833	38987954	reg1040260.p2	3.411	+	TSC_hg19_v1_chr1_-_38512453 L26494 NM_002699	-475444	-	TSC_hg19_v1_chr1_+_38478408 AF151852 AF067802 BC005182 AK296018 AK291900	-509463	+	TSC_hg19_v1_chr1_+_38478405 NM_016037 AK308377	-509508	+	AF323609 CU677671 DQ891734 DQ894911 AF272035 BC016668 NM_022157 TSC_hg19_v1_chr1_-_39325427 AK298788 AK315791	337493	-	AB451287 AB451419 BT007109 CR456936 DQ891491 DQ893698 DQ894690 AB007191 D50692 BC008686 AK311886 TSC_hg19_v1_chr1_-_39339041 NM_012333	351123	-	AK312811 BC051675 AK123051 NM_030772	359384	-	L26494|POU3F1|5453|POU class 3 homeobox 1##NM_002699|POU3F1|5453|POU class 3 homeobox 1##AF151852|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF067802|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##BC005182|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK296018|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK291900|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##NM_016037|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AK308377|UTP11L|51118|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)##AF323609|RRAGC|64121|Ras-related GTP binding C##DQ891734|RRAGC|64121|Ras-related GTP binding C##DQ894911|RRAGC|64121|Ras-related GTP binding C##AF272035|RRAGC|64121|Ras-related GTP binding C##BC016668|RRAGC|64121|Ras-related GTP binding C##NM_022157|RRAGC|64121|Ras-related GTP binding C##AK298788|RRAGC|64121|Ras-related GTP binding C##AK315791|RRAGC|64121|Ras-related GTP binding C##AB451287|MYCBP|26292|c-myc binding protein##AB451419|MYCBP|26292|c-myc binding protein##BT007109|MYCBP|26292|c-myc binding protein##CR456936|MYCBP|26292|c-myc binding protein##DQ891491|MYCBP|26292|c-myc binding protein##DQ893698|MYCBP|26292|c-myc binding protein##DQ894690|MYCBP|26292|c-myc binding protein##AB007191|MYCBP|26292|c-myc binding protein##D50692|MYCBP|26292|c-myc binding protein##BC008686|MYCBP|26292|c-myc binding protein##AK311886|MYCBP|26292|c-myc binding protein##NM_012333|MYCBP|26292|c-myc binding protein##AK312811|GJA9|81025|gap junction protein, alpha 9, 59kDa##BC051675|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##AK123051|GJA9-MYCBP|100527950|GJA9-MYCBP readthrough##NM_030772|GJA9|81025|gap junction protein, alpha 9, 59kDa	0.440013	CTCF.p2:32:0.440
chr14	77590401	77590581	reg1025865.p1	3.411	+	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	-25846	+	AK124327 TSC_hg19_v1_chr14_-_77542533	-47958	-	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-95431	-	BC117676 TSC_hg19_v1_chr14_-_77608072	17524	-	AK294840 TSC_hg19_v1_chr14_-_77608135 AK095612 NM_174976	17644	-	TSC_hg19_v1_chr14_+_77648082 NM_020431	57601	+	NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK294840|ZDHHC22|283576|zinc finger, DHHC-type containing 22##AK095612|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_174976|ZDHHC22|283576|zinc finger, DHHC-type containing 22##NM_020431|TMEM63C|57156|transmembrane protein 63C	0.0	
chr16	22692287	22692406	reg1009077.p2	3.411	+	NM_001135865 BC036263 AK296338 CU690320	-167364	+	CU676000 DQ892203 DQ892204 DQ895399 D12981 AB528417 AK292273 M63256 TSC_hg19_v1_chr16_-_22385939 BC017503 NM_001802	-306551	-	TSC_hg19_v1_chr16_+_22308740 AK026645 AK300735 AK023160 NM_018119 AK023231 AK296813 AK222789 BC000285 AK001371 AK222671 AB040885	-383598	+	TSC_hg19_v1_chr16_+_22825482 AY359095 AK313463	133156	+	AB209794 AF105374 AF105375 NM_006043 BC093734 BC093736	133505	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	468203	-	NM_001135865|LOC100132247|100132247|nuclear pore complex interacting protein related gene##BC036263|NPIPL3|23117|nuclear pore complex interacting protein-like 3##AK296338|LOC100132247|100132247|nuclear pore complex interacting protein related gene##DQ892203|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ892204|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##DQ895399|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##D12981|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK292273|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##M63256|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##BC017503|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##NM_001802|CDR2|1039|cerebellar degeneration-related protein 2, 62kDa##AK026645|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK300735|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023160|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##NM_018119|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK023231|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK296813|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222789|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##BC000285|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK001371|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AK222671|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AB040885|POLR3E|55718|polymerase (RNA) III (DNA directed) polypeptide E (80kD)##AY359095|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK313463|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AB209794|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105374|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AF105375|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##NM_006043|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093734|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##BC093736|HS3ST2|9956|heparan sulfate (glucosamine) 3-O-sulfotransferase 2##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31	0.0	
chr16	30218757	30218845	reg1036731.p2	3.411	+	AK298073 NM_001017390 NM_177552 BC132914 BC132920 BC144354 BC144355 BC171772 L25275	-8233	+	BC022832 NM_001031827 NM_001039182	-13175	-	NM_001014999 NM_001015000 NM_024044 NM_178044 BC015990 BC071688 BC000754 BC019306 AK027092 AK225436 BC130545 BC130547 BC144462 BC069007	-13608	+	TSC_hg19_v1_chr16_-_30346695 AK289905 BC063703	127898	-	BC013854 NM_001243646	147453	-	AK315708 TSC_hg19_v1_chr16_-_30366603 BC000495 BC001947 AF104222	147799	-	AK298073|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##NM_001017390|SULT1A4|445329|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 4##NM_177552|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132914|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC132920|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144354|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC144355|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC171772|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##L25275|SULT1A3|6818|sulfotransferase family, cytosolic, 1A, phenol-preferring, member 3##BC022832|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001031827|BOLA2|552900|bolA homolog 2 (E. coli)##NM_001039182|BOLA2B|654483|bolA homolog 2B (E. coli)##NM_001014999|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_001015000|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##NM_024044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##NM_178044|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC015990|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC071688|SLX1A-SULT1A3|100526830|SLX1A-SULT1A3 readthrough##BC000754|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC019306|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK027092|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK225436|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130545|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC130547|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##BC144462|SLX1A|548593|SLX1 structure-specific endonuclease subunit homolog A (S. cerevisiae)##BC069007|SLX1B|79008|SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae)##AK289905|LOC595101|595101|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene##BC063703|LOC595101|595101|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene##BC013854|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##NM_001243646|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##AK315708|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##BC000495|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##BC001947|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2##AF104222|CD2BP2|10421|CD2 (cytoplasmic tail) binding protein 2	0.261405	CTCF.p2:2:0.211
chr16	59283153	59283257	reg1045347.p1	3.411	+	CU674254 TSC_hg19_v1_chr16_-_58768221 DQ891883 DQ895068 M22632 BC000525 AK290847 AK223271 AK302249 AK295993 AK098313 NM_002080	-515008	-	TSC_hg19_v1_chr16_-_58718647 BC063399 AK222932 AK022786 AK001677 AK299424 NM_018231	-564549	-	TSC_hg19_v1_chr16_-_58663742 BC040523 AL833549 NM_016284 NM_206999	-619460	-	AK124734 NM_001796	2787533	-	AY380223 AY380224 D21254 NM_001797 TSC_hg19_v1_chr16_-_65155922	5872697	-	AK291251 AK308000 TSC_hg19_v1_chr16_-_65155967	5872763	-	DQ891883|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##DQ895068|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##M22632|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC000525|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK290847|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK223271|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK302249|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK295993|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##AK098313|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##NM_002080|GOT2|2806|glutamic-oxaloacetic transaminase 2, mitochondrial (aspartate aminotransferase 2)##BC063399|SLC38A7|55238|solute carrier family 38, member 7##AK222932|SLC38A7|55238|solute carrier family 38, member 7##AK022786|SLC38A7|55238|solute carrier family 38, member 7##AK001677|SLC38A7|55238|solute carrier family 38, member 7##AK299424|SLC38A7|55238|solute carrier family 38, member 7##NM_018231|SLC38A7|55238|solute carrier family 38, member 7##BC040523|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AL833549|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_016284|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##NM_206999|CNOT1|23019|CCR4-NOT transcription complex, subunit 1##AK124734|CDH8|1006|cadherin 8, type 2##NM_001796|CDH8|1006|cadherin 8, type 2##D21254|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##NM_001797|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK291251|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)##AK308000|CDH11|1009|cadherin 11, type 2, OB-cadherin (osteoblast)	0.05113	
chr17	26876886	26876963	reg1039908.p1	3.411	+	NM_003593 Y11739	-25966	+	TSC_hg19_v1_chr17_+_26800661 AK314684 NM_001145975 NM_001145976 NM_003984 U26209 BC096276 BC096277 BC096278 BC096279 AK091926 AK298388 AK303909 AK303936	-76218	+	CU678258 TSC_hg19_v1_chr17_+_26794963	-82021	+	AF028788 AF028789 TSC_hg19_v1_chr17_-_26879616 AK292329 BC027176 U40998	2686	-	NM_005148 NM_054035 TSC_hg19_v1_chr17_-_26879647 AB593014	2728	-	AY359112 AB057723 AB527641 CU686718 TSC_hg19_v1_chr17_-_26898525 AK055512 BC069228 AK075428 AK297046 AK314583	21605	-	NM_003593|FOXN1|8456|forkhead box N1##Y11739|FOXN1|8456|forkhead box N1##AK314684|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145975|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_001145976|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##NM_003984|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##U26209|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096276|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096277|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096278|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##BC096279|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK091926|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK298388|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303909|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AK303936|SLC13A2|9058|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2##AF028788|UNC119|9094|unc-119 homolog (C. elegans)##AF028789|UNC119|9094|unc-119 homolog (C. elegans)##AK292329|UNC119|9094|unc-119 homolog (C. elegans)##BC027176|UNC119|9094|unc-119 homolog (C. elegans)##U40998|UNC119|9094|unc-119 homolog (C. elegans)##NM_005148|UNC119|9094|unc-119 homolog (C. elegans)##NM_054035|UNC119|9094|unc-119 homolog (C. elegans)##AB593014|UNC119|9094|unc-119 homolog (C. elegans)##AY359112|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AB057723|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK055512|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##BC069228|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK075428|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK297046|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S##AK314583|PIGS|94005|phosphatidylinositol glycan anchor biosynthesis, class S	0.0	
chr17	30819174	30819305	reg1043599.p1	3.411	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-4479	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-4642	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-5168	+	CU688936 AB385376 AB018270 BC146763 NM_015194	384656	-	TSC_hg19_v1_chr17_-_31204141 AK127942	384884	-	TSC_hg19_v1_chr17_-_31204196 BC030602	384974	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.0	
chr17	8113173	8113322	reg1044648.p1	3.411	+	TSC_hg19_v1_chr17_-_8093499 NM_017622	-19720	-	BC009261 AK000021 AK222506 TSC_hg19_v1_chr17_-_8093462 BC018880 BC070272	-19843	-	CU687070 BC006292 TSC_hg19_v1_chr17_-_8079699 AK127891 AK315666 AK027813 BC119730 BC119731 BC127649 BC127650 AY358525 BC070231 NM_032354 NM_183065	-33587	-	BC009751 AB011446 BC080581 AB011450 AF004022 AF015254 BC000442 NM_004217 TSC_hg19_v1_chr17_-_8113894 AK314889 AK297976 BC013300	636	-	DQ451688 FJ790670 AL831955 TSC_hg19_v1_chr17_-_8151371 AK091077 AX746768 BC111783	38115	-	TSC_hg19_v1_chr17_-_8151373 NM_025099	38145	-	NM_017622|C17orf59|54785|chromosome 17 open reading frame 59##BC009261|C17orf59|54785|chromosome 17 open reading frame 59##AK000021|C17orf59|54785|chromosome 17 open reading frame 59##AK222506|C17orf59|54785|chromosome 17 open reading frame 59##BC018880|C17orf59|54785|chromosome 17 open reading frame 59##BC070272|C17orf59|54785|chromosome 17 open reading frame 59##BC006292|TMEM107|84314|transmembrane protein 107##AK315666|TMEM107|84314|transmembrane protein 107##AK027813|TMEM107|84314|transmembrane protein 107##BC119730|TMEM107|84314|transmembrane protein 107##BC119731|TMEM107|84314|transmembrane protein 107##BC127649|TMEM107|84314|transmembrane protein 107##BC127650|TMEM107|84314|transmembrane protein 107##AY358525|TMEM107|84314|transmembrane protein 107##BC070231|TMEM107|84314|transmembrane protein 107##NM_032354|TMEM107|84314|transmembrane protein 107##NM_183065|TMEM107|84314|transmembrane protein 107##BC009751|AURKB|9212|aurora kinase B##AB011446|AURKB|9212|aurora kinase B##BC080581|AURKB|9212|aurora kinase B##AB011450|AURKB|9212|aurora kinase B##AF004022|AURKB|9212|aurora kinase B##AF015254|AURKB|9212|aurora kinase B##BC000442|AURKB|9212|aurora kinase B##NM_004217|AURKB|9212|aurora kinase B##AK314889|AURKB|9212|aurora kinase B##AK297976|AURKB|9212|aurora kinase B##BC013300|AURKB|9212|aurora kinase B##DQ451688|CTC1|80169|CTS telomere maintenance complex component 1##FJ790670|CTC1|80169|CTS telomere maintenance complex component 1##AL831955|CTC1|80169|CTS telomere maintenance complex component 1##AK091077|CTC1|80169|CTS telomere maintenance complex component 1##BC111783|CTC1|80169|CTS telomere maintenance complex component 1##NM_025099|CTC1|80169|CTS telomere maintenance complex component 1	0.0	
chr18	60822514	60822633	reg1012198.p1	3.411	+	TSC_hg19_v1_chr18_-_60795898 AF401211	-26638	-	TSC_hg19_v1_chr18_+_60384261 BC126277 BC014927 AK001924 AB385360	-438265	+	TSC_hg19_v1_chr18_+_60383911 AB011178	-438647	+	BC027258 NM_000633 NM_000657	163987	-	TSC_hg19_v1_chr18_-_60986977 X06487	164420	-	TSC_hg19_v1_chr18_-_60987309 M13994	164713	-	AF401211|BCL2|596|B-cell CLL/lymphoma 2##BC126277|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC014927|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AK001924|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##AB011178|PHLPP1|23239|PH domain and leucine rich repeat protein phosphatase 1##BC027258|BCL2|596|B-cell CLL/lymphoma 2##NM_000633|BCL2|596|B-cell CLL/lymphoma 2##NM_000657|BCL2|596|B-cell CLL/lymphoma 2##X06487|BCL2|596|B-cell CLL/lymphoma 2##M13994|BCL2|596|B-cell CLL/lymphoma 2	0.0	
chr19	19302943	19303028	reg1040044.p1	3.411	+	TSC_hg19_v1_chr19_-_19302962 X68502 EU831418 EU831443 EU831511 EU831535 X63380 BC064537 BC000489 BC004449 BC010178 BC010931 AK301086 AK316328 BC157868 BC171869	-21	-	TSC_hg19_v1_chr19_-_19281094 NM_001145785	-21892	-	TSC_hg19_v1_chr19_-_19281067 AK057210	-21918	-	NM_003721 NM_134440 BC114558 BC114563 AF094760	66	+	BC157837 BC171829 BC073957 NM_001145783 NM_001145784 NM_005919	325	-	TSC_hg19_v1_chr19_+_19303746 AF105427 AF077196 AF105428	767	+	X68502|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##EU831418|MEF2BNB|729991|MEF2B neighbor##EU831443|MEF2BNB|729991|MEF2B neighbor##EU831511|MEF2BNB|729991|MEF2B neighbor##EU831535|MEF2BNB|729991|MEF2B neighbor##X63380|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##BC064537|MEF2BNB|729991|MEF2B neighbor##BC000489|MEF2BNB|729991|MEF2B neighbor##BC004449|MEF2BNB|729991|MEF2B neighbor##BC010178|MEF2BNB|729991|MEF2B neighbor##BC010931|MEF2BNB|729991|MEF2B neighbor##AK301086|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##AK316328|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##BC157868|MEF2BNB|729991|MEF2B neighbor##BC171869|MEF2BNB|729991|MEF2B neighbor##NM_001145785|MEF2B|100271849|myocyte enhancer factor 2B##AK057210|MEF2B|100271849|myocyte enhancer factor 2B##NM_003721|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##NM_134440|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##BC114558|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##BC114563|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##AF094760|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##BC157837|MEF2BNB|729991|MEF2B neighbor##BC171829|MEF2BNB|729991|MEF2B neighbor##BC073957|MEF2BNB|729991|MEF2B neighbor##NM_001145783|MEF2BNB|729991|MEF2B neighbor##NM_001145784|MEF2BNB|729991|MEF2B neighbor##NM_005919|MEF2BNB-MEF2B|4207|MEF2BNB-MEF2B readthrough##AF105427|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##AF077196|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein##AF105428|RFXANK|8625|regulatory factor X-associated ankyrin-containing protein	0.0	
chr2	134920757	134920839	reg1039255.p2	3.411	+	AK057980 NM_207363 NM_207481 TSC_hg19_v1_chr2_-_134326043	-594760	-	TSC_hg19_v1_chr2_-_134179377 AK092189 AX747399	-741444	-	AK124659 TSC_hg19_v1_chr2_-_133539761	-1381104	-	NM_002410 D17716 AF113921	91087	+	TSC_hg19_v1_chr2_-_135476571 BC026170 NM_030923	555758	-	AK125008 NM_138326 BC016018 BC107420 AB071418	675420	+	AK057980|NCKAP5|344148|NCK-associated protein 5##NM_207363|NCKAP5|344148|NCK-associated protein 5##NM_207481|NCKAP5|344148|NCK-associated protein 5##AK092189|NCKAP5|344148|NCK-associated protein 5##AK124659|NCKAP5|344148|NCK-associated protein 5##NM_002410|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##D17716|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##AF113921|MGAT5|4249|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase##BC026170|TMEM163|81615|transmembrane protein 163##NM_030923|TMEM163|81615|transmembrane protein 163##AK125008|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##NM_138326|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC016018|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##BC107420|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase##AB071418|ACMSD|130013|aminocarboxymuconate semialdehyde decarboxylase	0.0	
chr2	139322572	139322679	reg1034358.p1	3.411	+	TSC_hg19_v1_chr2_+_139259500 AK021919	-63135	+	NM_001001664 BC071613 TSC_hg19_v1_chr2_+_139259435	-63232	+	NM_001024074 NM_001024075 NM_006895 AF523356 AF523357 AF523358 AF523359 AF523360 U08092 TSC_hg19_v1_chr2_+_138722046 BC005907 AK301462 AK313804 BC020677 D16224 AB590282 CU676632 DQ891166 DQ894348	-600691	+	AF043467 AB162675 BC101461 BC101462 BC101463 BC104741 NM_007226	215181	-	TSC_hg19_v1_chr2_-_142888540 AK054663	3565931	-	AF176832 NM_018557	3566644	-	NM_001001664|SPOPL|339745|speckle-type POZ protein-like##BC071613|SPOPL|339745|speckle-type POZ protein-like##NM_001024074|HNMT|3176|histamine N-methyltransferase##NM_001024075|HNMT|3176|histamine N-methyltransferase##NM_006895|HNMT|3176|histamine N-methyltransferase##AF523356|HNMT|3176|histamine N-methyltransferase##AF523357|HNMT|3176|histamine N-methyltransferase##AF523358|HNMT|3176|histamine N-methyltransferase##AF523359|HNMT|3176|histamine N-methyltransferase##AF523360|HNMT|3176|histamine N-methyltransferase##U08092|HNMT|3176|histamine N-methyltransferase##BC005907|HNMT|3176|histamine N-methyltransferase##AK301462|HNMT|3176|histamine N-methyltransferase##AK313804|HNMT|3176|histamine N-methyltransferase##BC020677|HNMT|3176|histamine N-methyltransferase##D16224|HNMT|3176|histamine N-methyltransferase##DQ891166|HNMT|3176|histamine N-methyltransferase##DQ894348|HNMT|3176|histamine N-methyltransferase##AF043467|NXPH2|11249|neurexophilin 2##AB162675|NXPH2|11249|neurexophilin 2##BC101461|NXPH2|11249|neurexophilin 2##BC101462|NXPH2|11249|neurexophilin 2##BC101463|NXPH2|11249|neurexophilin 2##BC104741|NXPH2|11249|neurexophilin 2##NM_007226|NXPH2|11249|neurexophilin 2##AK054663|LRP1B|53353|low density lipoprotein receptor-related protein 1B##AF176832|LRP1B|53353|low density lipoprotein receptor-related protein 1B##NM_018557|LRP1B|53353|low density lipoprotein receptor-related protein 1B	0.0	
chr22	31942973	31943043	reg1034007.p1	3.411	+	TSC_hg19_v1_chr22_+_31892521 BC110814 AK292408 BC041101	-50462	+	BC129926 BC129945 TSC_hg19_v1_chr22_+_31892499 AK303362 AK293987	-50567	+	TSC_hg19_v1_chr22_+_31892148 AB011114 NM_001007467 NM_014775	-50836	+	BC033613 TSC_hg19_v1_chr22_+_32010180	67158	+	TSC_hg19_v1_chr22_-_32026821 BC001482 NM_014338	83824	-	TSC_hg19_v1_chr22_-_32058202 AB528208 CU013140 CU013428 CR456540 DQ656048	115200	-	BC110814|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK292408|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC041101|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC129926|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC129945|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK303362|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AK293987|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##AB011114|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##NM_001007467|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##NM_014775|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC033613|SFI1|9814|Sfi1 homolog, spindle assembly associated (yeast)##BC001482|PISD|23761|phosphatidylserine decarboxylase##NM_014338|PISD|23761|phosphatidylserine decarboxylase##CU013140|PISD|23761|phosphatidylserine decarboxylase##CU013428|PISD|23761|phosphatidylserine decarboxylase##CR456540|PISD|23761|phosphatidylserine decarboxylase	0.0	
chr8	128300633	128300757	reg1030112.p2	3.411	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-729971	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-730140	-	TSC_hg19_v1_chr8_-_126963395 BX648371	-1337282	-	DQ486513 NM_001159542	127161	+	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	447630	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	447795	+	NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##BX648371|LOC100130231|100130231|uncharacterized LOC100130231##DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)	0.0	
chr8	133152937	133153028	reg1042730.p2	3.411	+	NM_001145095	-35471	-	AK297911 NM_001080399	-81356	-	BX648595 TSC_hg19_v1_chr8_+_132991247	-161773	+	AK296293 NM_001204824	306526	-	AB208890 AF033347 TSC_hg19_v1_chr8_-_133492689	339641	-	TSC_hg19_v1_chr8_-_133492751 AB527350 BC128576	339805	-	NM_001145095|HHLA1|10086|HERV-H LTR-associating 1##AK297911|OC90|729330|otoconin 90##NM_001080399|OC90|729330|otoconin 90##BX648595|EFR3A|23167|EFR3 homolog A (S. cerevisiae)##AK296293|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##NM_001204824|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AB208890|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##AF033347|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3##BC128576|KCNQ3|3786|potassium voltage-gated channel, KQT-like subfamily, member 3	0.961283	CTCF.p2:10:0.961
chr10	26558816	26558914	reg1042765.p1	3.410	+	M74826 BC029517 M81882 TSC_hg19_v1_chr10_+_26505702 BC126327 BC126329 AB527954 HQ258311	-53200	+	NM_000818 NM_001134366	-53630	+	AK310494 TSC_hg19_v1_chr10_+_26223169 AF229172 AY101367 BC036079 BC045538	-335685	+	TSC_hg19_v1_chr10_+_26727269 NM_019043	168406	+	TSC_hg19_v1_chr10_+_26727306 AK308916 AK000812 BC035636	168452	+	TSC_hg19_v1_chr10_+_26727679 BC054516	168803	+	M74826|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC029517|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##M81882|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126327|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##BC126329|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##HQ258311|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_000818|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##NM_001134366|GAD2|2572|glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)##AK310494|MYO3A|53904|myosin IIIA##AF229172|MYO3A|53904|myosin IIIA##AY101367|MYO3A|53904|myosin IIIA##BC036079|MYO3A|53904|myosin IIIA##BC045538|MYO3A|53904|myosin IIIA##NM_019043|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK308916|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##AK000812|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC035636|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein##BC054516|APBB1IP|54518|amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	0.042594	
chr10	74019433	74019509	reg1036318.p1	3.410	+	TSC_hg19_v1_chr10_-_73976047 AK094170 AK023436 NM_001198799 NM_001198800	-43360	-	TSC_hg19_v1_chr10_+_73975792 NM_001242546 NM_001242547 NM_001242548 NM_173473 EU552924 BC009530	-43683	+	TSC_hg19_v1_chr10_-_73975735 BC012291 NM_015947 NM_001198798	-43707	-	NM_019058 AL136668 TSC_hg19_v1_chr10_+_74033681 AK000507 BC007714 BC015236 AY090097 BC000708 AM392607 DQ890984 DQ894159 AB587474	14353	+	CU687966 TSC_hg19_v1_chr10_-_74114678 BC064920 AK000034 AK225051	95207	-	TSC_hg19_v1_chr10_-_74114902 NM_001002762 NM_017626 AK302071	95455	-	AK094170|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##AK023436|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198799|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198800|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001242546|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242547|ANAPC16|119504|anaphase promoting complex subunit 16##NM_001242548|ANAPC16|119504|anaphase promoting complex subunit 16##NM_173473|ANAPC16|119504|anaphase promoting complex subunit 16##EU552924|ANAPC16|119504|anaphase promoting complex subunit 16##BC009530|ANAPC16|119504|anaphase promoting complex subunit 16##BC012291|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_015947|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_001198798|ASCC1|51008|activating signal cointegrator 1 complex subunit 1##NM_019058|DDIT4|54541|DNA-damage-inducible transcript 4##AL136668|DDIT4|54541|DNA-damage-inducible transcript 4##AK000507|DDIT4|54541|DNA-damage-inducible transcript 4##BC007714|DDIT4|54541|DNA-damage-inducible transcript 4##BC015236|DDIT4|54541|DNA-damage-inducible transcript 4##AY090097|DDIT4|54541|DNA-damage-inducible transcript 4##BC000708|DDIT4|54541|DNA-damage-inducible transcript 4##AM392607|DDIT4|54541|DNA-damage-inducible transcript 4##DQ890984|DDIT4|54541|DNA-damage-inducible transcript 4##DQ894159|DDIT4|54541|DNA-damage-inducible transcript 4##BC064920|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK000034|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK225051|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_001002762|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##NM_017626|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12##AK302071|DNAJB12|54788|DnaJ (Hsp40) homolog, subfamily B, member 12	0.0	
chr11	7072064	7072245	reg1037311.p1	3.410	+	AK310900 NM_176822	-30455	+	BC136772 BC144405 AF056617 AK313462 TSC_hg19_v1_chr11_-_7041578 NM_013249	-30629	-	AK302639 AF056618 NM_013250 AK298365	-124512	+	NM_014469 AK292271 AF069682 BC057796 BC029295 AB527964	38103	+	TSC_hg19_v1_chr11_+_7273164 BC046367 NM_175733 AK315013	201039	+	AK055003 AB527847 CU692338 TSC_hg19_v1_chr11_+_7273475	201283	+	AK310900|NLRP14|338323|NLR family, pyrin domain containing 14##NM_176822|NLRP14|338323|NLR family, pyrin domain containing 14##BC136772|ZNF214|7761|zinc finger protein 214##BC144405|ZNF214|7761|zinc finger protein 214##AF056617|ZNF214|7761|zinc finger protein 214##AK313462|ZNF214|7761|zinc finger protein 214##NM_013249|ZNF214|7761|zinc finger protein 214##AF056618|ZNF215|7762|zinc finger protein 215##NM_013250|ZNF215|7762|zinc finger protein 215##AK298365|ZNF215|7762|zinc finger protein 215##NM_014469|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AK292271|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##AF069682|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC057796|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC029295|RBMXL2|27288|RNA binding motif protein, X-linked-like 2##BC046367|SYT9|143425|synaptotagmin IX##NM_175733|SYT9|143425|synaptotagmin IX##AK315013|SYT9|143425|synaptotagmin IX##AK055003|SYT9|143425|synaptotagmin IX	0.0	
chr1	181100780	181100898	reg1035708.p2	3.410	+	AK300732 TSC_hg19_v1_chr1_+_181057835 AK314830 BC000128 AF258581 BC108253 AF178984	-42974	+	NM_016545	-43202	+	CU680340 TSC_hg19_v1_chr1_+_181003143 AF031469 AF010447	-97689	+	NM_000721 NM_001205293 NM_001205294 L29384 L29385	351861	+	BC137223 BC137224 AK128654 NM_001009992	929958	-	TSC_hg19_v1_chr1_-_182354649 AK301600	1253843	-	BC000128|IER5|51278|immediate early response 5##AF258581|IER5|51278|immediate early response 5##BC108253|IER5|51278|immediate early response 5##AF178984|IER5|51278|immediate early response 5##NM_016545|IER5|51278|immediate early response 5##AF031469|MR1|3140|major histocompatibility complex, class I-related##AF010447|MR1|3140|major histocompatibility complex, class I-related##NM_000721|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205293|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##NM_001205294|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29384|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##L29385|CACNA1E|777|calcium channel, voltage-dependent, R type, alpha 1E subunit##BC137223|ZNF648|127665|zinc finger protein 648##BC137224|ZNF648|127665|zinc finger protein 648##AK128654|ZNF648|127665|zinc finger protein 648##NM_001009992|ZNF648|127665|zinc finger protein 648##AK301600|GLUL|2752|glutamate-ammonia ligase	0.0	
chr11	95030022	95030158	reg1040984.p2	3.410	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	-65786	-	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	-207078	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-229682	+	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	492561	-	TSC_hg19_v1_chr11_-_95522744 AK313727 BC028727	492643	-	AK021591 TSC_hg19_v1_chr11_-_95522975 BC026013 NM_144664	492876	-	BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B##AK313727|FAM76B|143684|family with sequence similarity 76, member B##BC028727|FAM76B|143684|family with sequence similarity 76, member B##AK021591|FAM76B|143684|family with sequence similarity 76, member B##BC026013|FAM76B|143684|family with sequence similarity 76, member B##NM_144664|FAM76B|143684|family with sequence similarity 76, member B	0.0	
chr12	109125693	109125759	reg1023181.p2	3.410	+	TSC_hg19_v1_chr12_-_109125295 AK023205 AK223073 AK304839 AK311315 AK316065 AB030656 NM_014325	-434	-	TSC_hg19_v1_chr12_-_109125284 BC002342 AB209909	-446	-	TSC_hg19_v1_chr12_-_109125268 AL162070 AK297463	-463	-	AK095421 NM_001161331	95600	-	AB072355 AB072356 TSC_hg19_v1_chr12_-_109251307	125564	-	TSC_hg19_v1_chr12_-_109251360 BC062341 NM_001161330 NM_018984	125696	-	AK023205|CORO1C|23603|coronin, actin binding protein, 1C##AK223073|CORO1C|23603|coronin, actin binding protein, 1C##AK304839|CORO1C|23603|coronin, actin binding protein, 1C##AK311315|CORO1C|23603|coronin, actin binding protein, 1C##AK316065|CORO1C|23603|coronin, actin binding protein, 1C##AB030656|CORO1C|23603|coronin, actin binding protein, 1C##NM_014325|CORO1C|23603|coronin, actin binding protein, 1C##BC002342|CORO1C|23603|coronin, actin binding protein, 1C##AB209909|CORO1C|23603|coronin, actin binding protein, 1C##AL162070|CORO1C|23603|coronin, actin binding protein, 1C##AK297463|CORO1C|23603|coronin, actin binding protein, 1C##AK095421|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161331|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072355|SSH1|54434|slingshot homolog 1 (Drosophila)##AB072356|SSH1|54434|slingshot homolog 1 (Drosophila)##BC062341|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_001161330|SSH1|54434|slingshot homolog 1 (Drosophila)##NM_018984|SSH1|54434|slingshot homolog 1 (Drosophila)	0.0	
chr1	25945704	25945803	reg1044050.p1	3.410	+	AB209275 TSC_hg19_v1_chr1_+_25944698	-1098	+	AF261655 NM_020379	-1795	+	TSC_hg19_v1_chr1_+_25870146 BC029770 AL117654 AB528624	-75589	+	TSC_hg19_v1_chr1_+_26126678 AJ306399 NM_020451 NM_206926	180915	+	TSC_hg19_v1_chr1_+_26146429 NM_001099625 NM_001099627 BX647921	200657	+	TSC_hg19_v1_chr1_+_26146468 AB075880 AK314297 AK299221 AF173891	200718	+	AB209275|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##AF261655|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##NM_020379|MAN1C1|57134|mannosidase, alpha, class 1C, member 1##BC029770|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AL117654|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##AJ306399|SEPN1|57190|selenoprotein N, 1##NM_020451|SEPN1|57190|selenoprotein N, 1##NM_206926|SEPN1|57190|selenoprotein N, 1##NM_001099625|FAM54B|56181|family with sequence similarity 54, member B##NM_001099627|FAM54B|56181|family with sequence similarity 54, member B##BX647921|FAM54B|56181|family with sequence similarity 54, member B##AB075880|FAM54B|56181|family with sequence similarity 54, member B##AK314297|FAM54B|56181|family with sequence similarity 54, member B##AK299221|FAM54B|56181|family with sequence similarity 54, member B##AF173891|FAM54B|56181|family with sequence similarity 54, member B	0.331142	CTCF.p2:-9:0.331
chr1	51086359	51086489	reg1038553.p1	3.410	+	TSC_hg19_v1_chr1_-_50889116 NM_032110	-197313	-	TSC_hg19_v1_chr1_+_50575478 AK298817 AK309653 AB528649	-510886	+	TSC_hg19_v1_chr1_+_50574617 AY033997 BC036071 AY033998 M62843	-511740	+	AF094700 AF106798 DQ892939 DQ896188 AB385209 TSC_hg19_v1_chr1_-_51425682 AF132938 AF136173	339153	-	TSC_hg19_v1_chr1_-_51425740 BC067100	339332	-	TSC_hg19_v1_chr1_-_51425796 AJ271408	339375	-	NM_032110|DMRTA2|63950|DMRT-like family A2##AK298817|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AK309653|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033997|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##BC036071|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AY033998|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##M62843|ELAVL4|1996|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)##AF094700|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF106798|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ892939|FAF1|11124|Fas (TNFRSF6) associated factor 1##DQ896188|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF132938|FAF1|11124|Fas (TNFRSF6) associated factor 1##AF136173|FAF1|11124|Fas (TNFRSF6) associated factor 1##BC067100|FAF1|11124|Fas (TNFRSF6) associated factor 1##AJ271408|FAF1|11124|Fas (TNFRSF6) associated factor 1	0.279032	CTCF.p2:1:0.279
chr1	54030159	54030225	reg1037025.p2	3.410	+	AK302085 TSC_hg19_v1_chr1_+_53925533 BC029566	-104662	+	AK057273 NM_033067 AJ291671	-105085	+	TSC_hg19_v1_chr1_-_53793743 NM_001018054 NM_004631 NM_017522 NM_033300	-236411	-	AK090634 AX746550 NM_147193	169684	-	DQ141696 AK302910 BX648031 TSC_hg19_v1_chr1_-_54304004 AK298909 AK295000	273782	-	AK001269 AL354612 AL354613 TSC_hg19_v1_chr1_-_54304168 BC003082 NM_001168551 NM_018087	273973	-	AK302085|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##BC029566|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AK057273|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_033067|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##AJ291671|DMRTB1|63948|DMRT-like family B with proline-rich C-terminal, 1##NM_001018054|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_004631|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_017522|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##NM_033300|LRP8|7804|low density lipoprotein receptor-related protein 8, apolipoprotein e receptor##AK090634|GLIS1|148979|GLIS family zinc finger 1##NM_147193|GLIS1|148979|GLIS family zinc finger 1##DQ141696|TMEM48|55706|transmembrane protein 48##AK302910|TMEM48|55706|transmembrane protein 48##BX648031|TMEM48|55706|transmembrane protein 48##AK298909|TMEM48|55706|transmembrane protein 48##AK295000|TMEM48|55706|transmembrane protein 48##AK001269|TMEM48|55706|transmembrane protein 48##AL354612|TMEM48|55706|transmembrane protein 48##AL354613|TMEM48|55706|transmembrane protein 48##BC003082|TMEM48|55706|transmembrane protein 48##NM_001168551|TMEM48|55706|transmembrane protein 48##NM_018087|TMEM48|55706|transmembrane protein 48	0.0	
chr15	52455885	52455990	reg1032706.p1	3.410	+	AF285092 AB587584 TSC_hg19_v1_chr15_-_52404936 BC093826 BC093828 BC143227 BC104442 BC104443 AF326964 NM_020396	-50991	-	TSC_hg19_v1_chr15_+_52311442 BC035492	-144476	+	TSC_hg19_v1_chr15_+_52311432 CR749401	-144503	+	AB528747 AF501885 AM393025 TSC_hg19_v1_chr15_-_52472123 AL117471 BC011671 AK314775 BC013997 AF017656 NM_006578 AK290330	16204	-	TSC_hg19_v1_chr15_+_52472257 AF007131	16398	+	NM_016194	27627	-	AF285092|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093826|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC093828|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104442|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC104443|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##AF326964|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##NM_020396|BCL2L10|10017|BCL2-like 10 (apoptosis facilitator)##BC035492|MAPK6|5597|mitogen-activated protein kinase 6##CR749401|MAPK6|5597|mitogen-activated protein kinase 6##AF501885|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AM393025|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AL117471|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC011671|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK314775|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##BC013997|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF017656|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##NM_006578|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AK290330|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5##AF007131|LOC100129973|100129973|uncharacterized LOC100129973##NM_016194|GNB5|10681|guanine nucleotide binding protein (G protein), beta 5	0.997777	CTCF.p2:-18:0.998
chr16	2904572	2904640	reg1026748.p1	3.410	+	NM_145252 AY359021 JN411265 BC009722 AB528168 AM392915 AM393869 EF067313 AK311810	-24368	+	BC074999 BC075000 TSC_hg19_v1_chr16_+_2867242 AY359034 AF058300 AB031329 AB031330	-37360	+	NM_006799 NM_144956 NM_144957 AB031331 TSC_hg19_v1_chr16_+_2867207	-37421	+	CU679465 AB010779 AF321182 BC009726 AY358396 NM_022119	3531	-	NM_001142499 NM_001142500 NM_138439 TSC_hg19_v1_chr16_+_2933215 BC014089	28650	+	TSC_hg19_v1_chr16_+_2961983 BC028572 NM_020912 NM_032296	57358	+	NM_145252|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AY359021|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##JN411265|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC009722|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM392915|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AM393869|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##EF067313|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##AK311810|ZG16B|124220|zymogen granule protein 16 homolog B (rat)##BC074999|PRSS21|10942|protease, serine, 21 (testisin)##BC075000|PRSS21|10942|protease, serine, 21 (testisin)##AY359034|PRSS21|10942|protease, serine, 21 (testisin)##AF058300|PRSS21|10942|protease, serine, 21 (testisin)##AB031329|PRSS21|10942|protease, serine, 21 (testisin)##AB031330|PRSS21|10942|protease, serine, 21 (testisin)##NM_006799|PRSS21|10942|protease, serine, 21 (testisin)##NM_144956|PRSS21|10942|protease, serine, 21 (testisin)##NM_144957|PRSS21|10942|protease, serine, 21 (testisin)##AB031331|PRSS21|10942|protease, serine, 21 (testisin)##AB010779|PRSS22|64063|protease, serine, 22##AF321182|PRSS22|64063|protease, serine, 22##BC009726|PRSS22|64063|protease, serine, 22##AY358396|PRSS22|64063|protease, serine, 22##NM_022119|PRSS22|64063|protease, serine, 22##NM_001142499|FLYWCH2|114984|FLYWCH family member 2##NM_001142500|FLYWCH2|114984|FLYWCH family member 2##NM_138439|FLYWCH2|114984|FLYWCH family member 2##BC014089|FLYWCH2|114984|FLYWCH family member 2##BC028572|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_020912|FLYWCH1|84256|FLYWCH-type zinc finger 1##NM_032296|FLYWCH1|84256|FLYWCH-type zinc finger 1	0.0	
chr16	75299991	75300082	reg1031256.p1	3.410	+	TSC_hg19_v1_chr16_-_75299906 AK302617 NM_001170720 AK027608 AK293808 NM_001170714 NM_001170718	-211	-	EU831404 EU831496 TSC_hg19_v1_chr16_-_75285534 AJ242987 AB040024 AF218451 AK314722 NM_001170717 NM_014567	-14529	-	AK294513 NM_001170719	-17856	-	AK295809 NM_001170716	656	-	AK124815 NM_001170715	1914	-	BT009819 CR542111 AB463545 CU674490 DQ890998 EU176574 AK313948 TSC_hg19_v1_chr16_-_75467369 AB009285 D85939 BC000991 NM_006324 AK226031	167289	-	AK302617|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170720|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK027608|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK293808|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170714|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170718|BCAR1|9564|breast cancer anti-estrogen resistance 1##EU831404|BCAR1|9564|breast cancer anti-estrogen resistance 1##EU831496|BCAR1|9564|breast cancer anti-estrogen resistance 1##AJ242987|BCAR1|9564|breast cancer anti-estrogen resistance 1##AB040024|BCAR1|9564|breast cancer anti-estrogen resistance 1##AF218451|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK314722|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170717|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_014567|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK294513|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170719|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK295809|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170716|BCAR1|9564|breast cancer anti-estrogen resistance 1##AK124815|BCAR1|9564|breast cancer anti-estrogen resistance 1##NM_001170715|BCAR1|9564|breast cancer anti-estrogen resistance 1##BT009819|CFDP1|10428|craniofacial development protein 1##CR542111|CFDP1|10428|craniofacial development protein 1##DQ890998|CFDP1|10428|craniofacial development protein 1##EU176574|CFDP1|10428|craniofacial development protein 1##AK313948|CFDP1|10428|craniofacial development protein 1##AB009285|CFDP1|10428|craniofacial development protein 1##D85939|CFDP1|10428|craniofacial development protein 1##BC000991|CFDP1|10428|craniofacial development protein 1##NM_006324|CFDP1|10428|craniofacial development protein 1##AK226031|CFDP1|10428|craniofacial development protein 1	0.0	
chr17	57410126	57410193	reg1035275.p2	3.410	+	TSC_hg19_v1_chr17_+_57409043 NM_001005404 BC132884 BC132886 AK097253 AB098736	-1141	+	NM_001165993 NM_001165994 NM_182569 AK094770 AY271346 BC034432 EU192951	-112261	+	AF349467 NM_018149 TSC_hg19_v1_chr17_+_57287384 AL834490 AK026858 BC031604	-122762	+	AF461690 NM_001166301 NM_024612 TSC_hg19_v1_chr17_+_57642970 BC024187 AK299151 AK095681 AF260270 AK226048 AB384723 DQ890909 DQ894060	232828	+	TSC_hg19_v1_chr17_+_57697037 NM_004859	286886	+	TSC_hg19_v1_chr17_+_57697265 BC054489 BX640615	287111	+	NM_001005404|YPEL2|388403|yippee-like 2 (Drosophila)##BC132884|YPEL2|388403|yippee-like 2 (Drosophila)##BC132886|YPEL2|388403|yippee-like 2 (Drosophila)##AK097253|YPEL2|388403|yippee-like 2 (Drosophila)##AB098736|YPEL2|388403|yippee-like 2 (Drosophila)##NM_001165993|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_001165994|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##NM_182569|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AK094770|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AY271346|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##BC034432|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##EU192951|GDPD1|284161|glycerophosphodiester phosphodiesterase domain containing 1##AF349467|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_018149|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AL834490|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AK026858|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##BC031604|SMG8|55181|smg-8 homolog, nonsense mediated mRNA decay factor (C. elegans)##AF461690|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_001166301|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_024612|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##BC024187|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK299151|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK095681|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AF260270|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##AK226048|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ890909|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##DQ894060|DHX40|79665|DEAH (Asp-Glu-Ala-His) box polypeptide 40##NM_004859|CLTC|1213|clathrin, heavy chain (Hc)##BC054489|CLTC|1213|clathrin, heavy chain (Hc)##BX640615|CLTC|1213|clathrin, heavy chain (Hc)	0.0	
chr18	812822	812928	reg1035945.p1	3.410	+	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	-572	-	TSC_hg19_v1_chr18_-_712601 NM_202758 X67098 X89602 AK127818 BX648215 AK295850 AK292780 AK309035 BC001285 NM_001126123 NM_017512	-100293	-	AB464497 AK289986 BC028301 NM_001012716	-154583	-	AK313050 NM_001099733	92068	+	NM_001117 BC093837 BC101803 S83513	92466	+	AK290001 BC111020 NM_022840	1758580	-	AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_202758|ENOSF1|55556|enolase superfamily member 1##X67098|ENOSF1|55556|enolase superfamily member 1##X89602|ENOSF1|55556|enolase superfamily member 1##AK127818|ENOSF1|55556|enolase superfamily member 1##BX648215|ENOSF1|55556|enolase superfamily member 1##AK295850|ENOSF1|55556|enolase superfamily member 1##AK292780|ENOSF1|55556|enolase superfamily member 1##AK309035|ENOSF1|55556|enolase superfamily member 1##BC001285|ENOSF1|55556|enolase superfamily member 1##NM_001126123|ENOSF1|55556|enolase superfamily member 1##NM_017512|ENOSF1|55556|enolase superfamily member 1##AK289986|C18orf56|494514|chromosome 18 open reading frame 56##BC028301|C18orf56|494514|chromosome 18 open reading frame 56##NM_001012716|C18orf56|494514|chromosome 18 open reading frame 56##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001117|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC093837|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##BC101803|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##S83513|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##AK290001|METTL4|64863|methyltransferase like 4##BC111020|METTL4|64863|methyltransferase like 4##NM_022840|METTL4|64863|methyltransferase like 4	0.0	
chr2	121019133	121019275	reg1046161.p1	3.410	+	TSC_hg19_v1_chr2_+_121010498 BC018163	-8700	+	AK127675 AK304588 TSC_hg19_v1_chr2_+_121010450 M35416	-8760	+	NM_002881 TSC_hg19_v1_chr2_+_121010418	-8784	+	TSC_hg19_v1_chr2_+_121103712 BC030029 NM_002193 DQ890708 AB463775 M31682 M13437	84593	+	NM_005270 BC111410 AB489165 DQ086814 AY493737 AY493738 AY493739 DQ004396	535689	+	TSC_hg19_v1_chr2_-_122042779 AF198488 BC064698 AL137740 NM_014553	1023569	-	BC018163|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK127675|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##AK304588|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##M35416|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##NM_002881|RALB|5899|v-ral simian leukemia viral oncogene homolog B (ras related; GTP binding protein)##BC030029|INHBB|3625|inhibin, beta B##NM_002193|INHBB|3625|inhibin, beta B##DQ890708|INHBB|3625|inhibin, beta B##M31682|INHBB|3625|inhibin, beta B##M13437|INHBB|3625|inhibin, beta B##NM_005270|GLI2|2736|GLI family zinc finger 2##BC111410|GLI2|2736|GLI family zinc finger 2##DQ086814|GLI2|2736|GLI family zinc finger 2##AY493737|GLI2|2736|GLI family zinc finger 2##AY493738|GLI2|2736|GLI family zinc finger 2##AY493739|GLI2|2736|GLI family zinc finger 2##DQ004396|GLI2|2736|GLI family zinc finger 2##AF198488|TFCP2L1|29842|transcription factor CP2-like 1##BC064698|TFCP2L1|29842|transcription factor CP2-like 1##AL137740|TFCP2L1|29842|transcription factor CP2-like 1##NM_014553|TFCP2L1|29842|transcription factor CP2-like 1	0.0	
chr21	43619606	43619734	reg1040310.p1	3.410	+	AB096965 AY771619 AY771620 NM_001004416 NM_173568	-128245	+	AB051810 AB051811 NM_001199527 NM_001199528	-136603	+	TSC_hg19_v1_chr21_-_43430467 AB033053 AK300291 BC063290 AK308179 AB041014 AB041015 AB190372 AB190373 AB190374 CR933655 NM_001098402 NM_001098403 NM_020727	-189199	-	AF323660 NM_207627 AF323661 NM_207628	189	+	AF323662 NM_207629	16516	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	19623	+	AB096965|UMODL1|89766|uromodulin-like 1##AY771619|UMODL1|89766|uromodulin-like 1##AY771620|UMODL1|89766|uromodulin-like 1##NM_001004416|UMODL1|89766|uromodulin-like 1##NM_173568|UMODL1|89766|uromodulin-like 1##AB051810|UMODL1|89766|uromodulin-like 1##AB051811|UMODL1|89766|uromodulin-like 1##NM_001199527|UMODL1|89766|uromodulin-like 1##NM_001199528|UMODL1|89766|uromodulin-like 1##AB033053|ZNF295|49854|zinc finger protein 295##AK300291|ZNF295|49854|zinc finger protein 295##BC063290|ZNF295|49854|zinc finger protein 295##AK308179|ZNF295|49854|zinc finger protein 295##AB041014|ZNF295|49854|zinc finger protein 295##AB041015|ZNF295|49854|zinc finger protein 295##AB190372|ZNF295|49854|zinc finger protein 295##AB190373|ZNF295|49854|zinc finger protein 295##AB190374|ZNF295|49854|zinc finger protein 295##CR933655|ZNF295|49854|zinc finger protein 295##NM_001098402|ZNF295|49854|zinc finger protein 295##NM_001098403|ZNF295|49854|zinc finger protein 295##NM_020727|ZNF295|49854|zinc finger protein 295##AF323660|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207627|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323661|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207628|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323662|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207629|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1	0.0	
chr21	45593129	45593196	reg1036500.p2	3.410	+	TSC_hg19_v1_chr21_+_45553564 D86062 BC003587 D86061	-39601	+	TSC_hg19_v1_chr21_+_45553491 NM_004649 NM_198155 U53003 BC002370 Y07572	-39657	+	TSC_hg19_v1_chr21_+_45527269 U53346 X95263 BC013309 BC014988	-65863	+	AF216749 CU687930 AB528572 AF199028 BC064637 AF289028 TSC_hg19_v1_chr21_-_45660825 AB014553 NM_015259	67604	-	TSC_hg19_v1_chr21_-_45660850 AK090492 AK290192 AK294031 AK311496 AK314369 AX746477	67695	-	AF194032 NM_013369 NM_175867	88936	-	D86062|C21orf33|8209|chromosome 21 open reading frame 33##BC003587|C21orf33|8209|chromosome 21 open reading frame 33##D86061|C21orf33|8209|chromosome 21 open reading frame 33##NM_004649|C21orf33|8209|chromosome 21 open reading frame 33##NM_198155|C21orf33|8209|chromosome 21 open reading frame 33##U53003|C21orf33|8209|chromosome 21 open reading frame 33##BC002370|C21orf33|8209|chromosome 21 open reading frame 33##Y07572|C21orf33|8209|chromosome 21 open reading frame 33##U53346|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##X95263|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC013309|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##BC014988|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)##AF216749|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF199028|ICOSLG|23308|inducible T-cell co-stimulator ligand##BC064637|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF289028|ICOSLG|23308|inducible T-cell co-stimulator ligand##AB014553|ICOSLG|23308|inducible T-cell co-stimulator ligand##NM_015259|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK090492|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK290192|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK294031|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK311496|ICOSLG|23308|inducible T-cell co-stimulator ligand##AK314369|ICOSLG|23308|inducible T-cell co-stimulator ligand##AF194032|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_013369|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like##NM_175867|DNMT3L|29947|DNA (cytosine-5-)-methyltransferase 3-like	0.192608	
chr2	23768200	23768279	reg1033712.p1	3.410	+	NM_052920	-159942	+	TSC_hg19_v1_chr2_-_21266940 AK290844 NM_000384 X04506 X04714	-2501310	-	TSC_hg19_v1_chr2_-_21266896 J02610 M12681	-2501340	-	TSC_hg19_v1_chr2_-_24149946 BC171846 BC037408 NM_001242338 NM_017552 AK094821	381707	-	TSC_hg19_v1_chr2_+_24150144 BC037901	381918	+	TSC_hg19_v1_chr2_+_24163332 BC092484 AL832079 NM_181713 BC111997 BC093681 BC143298	395132	+	NM_052920|KLHL29|114818|kelch-like 29 (Drosophila)##AK290844|APOB|338|apolipoprotein B (including Ag(x) antigen)##NM_000384|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04506|APOB|338|apolipoprotein B (including Ag(x) antigen)##X04714|APOB|338|apolipoprotein B (including Ag(x) antigen)##J02610|APOB|338|apolipoprotein B (including Ag(x) antigen)##M12681|APOB|338|apolipoprotein B (including Ag(x) antigen)##BC171846|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037408|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_001242338|ATAD2B|54454|ATPase family, AAA domain containing 2B##NM_017552|ATAD2B|54454|ATPase family, AAA domain containing 2B##AK094821|ATAD2B|54454|ATPase family, AAA domain containing 2B##BC037901|UBXN2A|165324|UBX domain protein 2A##BC092484|UBXN2A|165324|UBX domain protein 2A##AL832079|UBXN2A|165324|UBX domain protein 2A##NM_181713|UBXN2A|165324|UBX domain protein 2A##BC111997|UBXN2A|165324|UBX domain protein 2A##BC093681|UBXN2A|165324|UBX domain protein 2A##BC143298|UBXN2A|165324|UBX domain protein 2A	0.638336	CTCF.p2:-60:0.638
chr2	47882280	47882423	reg1028110.p2	3.410	+	AF287302 NM_022055 BC047749	-84868	-	TSC_hg19_v1_chr2_+_47630294 AK223284 AK296831 AK297763 BX649122 BC021566 AK311330 DQ892558 DQ895772 AB489153 BC001122 U03911 CU692370 DQ648894	-252034	+	TSC_hg19_v1_chr2_+_47630289 BC012599 NM_000251 U04045 AK222860 L47574 L47575 L47576 L47577 L47578 L47579 L47580 L47581 L47582 L47583	-252083	+	TSC_hg19_v1_chr2_-_47918421 D28393	36068	-	BC071594 NM_000179 TSC_hg19_v1_chr2_+_48010283 U28946 D89646 BC104665 U54777 BC004246 AK293921 AK308392 AB590153 DQ892898	127945	+	AK304140 AK315108 NM_025133	233500	-	AF287302|KCNK12|56660|potassium channel, subfamily K, member 12##NM_022055|KCNK12|56660|potassium channel, subfamily K, member 12##BC047749|KCNK12|56660|potassium channel, subfamily K, member 12##AK223284|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK296831|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK297763|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BX649122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC021566|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK311330|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ892558|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ895772|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC001122|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U03911|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##DQ648894|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##BC012599|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##NM_000251|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##U04045|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##AK222860|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47574|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47575|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47576|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47577|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47578|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47579|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47580|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47581|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47582|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##L47583|MSH2|4436|mutS homolog 2, colon cancer, nonpolyposis type 1 (E. coli)##D28393|RPL18A|6142|ribosomal protein L18a##BC071594|MSH6|2956|mutS homolog 6 (E. coli)##NM_000179|MSH6|2956|mutS homolog 6 (E. coli)##U28946|MSH6|2956|mutS homolog 6 (E. coli)##D89646|MSH6|2956|mutS homolog 6 (E. coli)##BC104665|MSH6|2956|mutS homolog 6 (E. coli)##U54777|MSH6|2956|mutS homolog 6 (E. coli)##BC004246|MSH6|2956|mutS homolog 6 (E. coli)##AK293921|MSH6|2956|mutS homolog 6 (E. coli)##AK308392|MSH6|2956|mutS homolog 6 (E. coli)##DQ892898|MSH6|2956|mutS homolog 6 (E. coli)##AK304140|FBXO11|80204|F-box protein 11##AK315108|FBXO11|80204|F-box protein 11##NM_025133|FBXO11|80204|F-box protein 11	0.0	
chr2	98524600	98524681	reg1026435.p1	3.410	+	AK025852 TSC_hg19_v1_chr2_-_98408976	-115718	-	AB083211 NM_207519	-173772	+	L05148 NM_001079 AK303341 AK310637 AK310628 BC053878	-194598	+	AK297450 TSC_hg19_v1_chr2_-_98612338 NM_015348	87546	-	TSC_hg19_v1_chr2_-_98612395 AK098792	87763	-	NM_144992 AL832761 BC095480 TSC_hg19_v1_chr2_+_98703652 AK292397 AK057248 AL832635 BC150653 AK302390 BC026091	179006	+	AK025852|TMEM131|23505|transmembrane protein 131##AB083211|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_207519|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##L05148|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##NM_001079|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK303341|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310637|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK310628|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##BC053878|ZAP70|7535|zeta-chain (TCR) associated protein kinase 70kDa##AK297450|TMEM131|23505|transmembrane protein 131##NM_015348|TMEM131|23505|transmembrane protein 131##AK098792|TMEM131|23505|transmembrane protein 131##NM_144992|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832761|VWA3B|200403|von Willebrand factor A domain containing 3B##BC095480|VWA3B|200403|von Willebrand factor A domain containing 3B##AK292397|VWA3B|200403|von Willebrand factor A domain containing 3B##AK057248|VWA3B|200403|von Willebrand factor A domain containing 3B##AL832635|VWA3B|200403|von Willebrand factor A domain containing 3B##BC150653|VWA3B|200403|von Willebrand factor A domain containing 3B##AK302390|VWA3B|200403|von Willebrand factor A domain containing 3B##BC026091|VWA3B|200403|von Willebrand factor A domain containing 3B	0.0	
chr5	74712676	74712761	reg1039282.p2	3.410	+	TSC_hg19_v1_chr5_+_74633072 M11058	-79631	+	TSC_hg19_v1_chr5_+_74633061 AK299655 BC033692 AK292892	-79666	+	TSC_hg19_v1_chr5_+_74633022 BC024180	-79689	+	AF232930 TSC_hg19_v1_chr5_-_74807436 BC000102 AF136450	94715	-	TSC_hg19_v1_chr5_-_74807448 AK091851 AK292087 AX747221 NM_005713 NM_031361	94751	-	AF163570 NM_016218 TSC_hg19_v1_chr5_+_74807715 AK091659 AK314610 AK026316 AF194973 AF315601 AF318313	95018	+	M11058|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##AK299655|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##BC033692|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##AK292892|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##BC024180|HMGCR|3156|3-hydroxy-3-methylglutaryl-CoA reductase##AF232930|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##BC000102|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AF136450|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AK091851|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AK292087|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##NM_005713|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##NM_031361|COL4A3BP|10087|collagen, type IV, alpha 3 (Goodpasture antigen) binding protein##AF163570|POLK|51426|polymerase (DNA directed) kappa##NM_016218|POLK|51426|polymerase (DNA directed) kappa##AK091659|POLK|51426|polymerase (DNA directed) kappa##AK314610|POLK|51426|polymerase (DNA directed) kappa##AK026316|POLK|51426|polymerase (DNA directed) kappa##AF194973|POLK|51426|polymerase (DNA directed) kappa##AF318313|POLK|51426|polymerase (DNA directed) kappa	0.0	
chr6	166700270	166700371	reg1026106.p1	3.410	+	BC098425 NM_003181	-118191	-	BC008632 BC039614 TSC_hg19_v1_chr6_-_166401541 BX647106	-298786	-	TSC_hg19_v1_chr6_-_166401424 AK289375	-298887	-	BC034775 NM_175922 TSC_hg19_v1_chr6_-_166721880	21556	-	BC018969 NM_145169 TSC_hg19_v1_chr6_-_166756020	55687	-	TSC_hg19_v1_chr6_-_166756034 AF041429 BC028388	55714	-	BC098425|T|6862|T, brachyury homolog (mouse)##NM_003181|T|6862|T, brachyury homolog (mouse)##BC008632|LINC00473|90632|long intergenic non-protein coding RNA 473##BC039614|LINC00473|90632|long intergenic non-protein coding RNA 473##AK289375|LINC00473|90632|long intergenic non-protein coding RNA 473##BC034775|PRR18|285800|proline rich 18##NM_175922|PRR18|285800|proline rich 18##BC018969|SFT2D1|113402|SFT2 domain containing 1##NM_145169|SFT2D1|113402|SFT2 domain containing 1##AF041429|SFT2D1|113402|SFT2 domain containing 1##BC028388|SFT2D1|113402|SFT2 domain containing 1	0.0	
chr6	23350317	23350394	reg1039968.p1	3.410	+	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	-780630	+	X54394 X54393 GQ305133 M58594 NM_001163558	-1047308	-	BC015850 NM_000948	-1052626	-	AK096290 TSC_hg19_v1_chr6_+_24126442 NM_080723 AK311178 AK314373 AK225775 AF418980 BC023514 AL833257 BC067291	776075	+	AF181722 NM_181337	1006775	+	AF181721 NM_016356	1007924	-	NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##AK096290|NRSN1|140767|neurensin 1##NM_080723|NRSN1|140767|neurensin 1##AK314373|NRSN1|140767|neurensin 1##AK225775|NRSN1|140767|neurensin 1##AF418980|NRSN1|140767|neurensin 1##BC023514|NRSN1|140767|neurensin 1##AL833257|NRSN1|140767|neurensin 1##BC067291|NRSN1|140767|neurensin 1##AF181722|KAAG1|353219|kidney associated antigen 1##NM_181337|KAAG1|353219|kidney associated antigen 1##AF181721|DCDC2|51473|doublecortin domain containing 2##NM_016356|DCDC2|51473|doublecortin domain containing 2	0.0	
chr8	101452601	101452694	reg1040146.p1	3.410	+	TSC_hg19_v1_chr8_-_101322306 NM_183419	-130362	-	BC062676 BC105300 TSC_hg19_v1_chr8_-_101322180	-130466	-	AB271913 AB271914 AB029316 NM_015435	-137176	-	BC009500 BC035087 TSC_hg19_v1_chr8_-_101571985 BC050396 AL832842 AK095235 BC060843 AB077205 NM_198401	119293	-	AK093906 AX748361 NM_152628	209245	-	Z48501 AB385157 CU677537 DQ893508 DQ896500 TSC_hg19_v1_chr8_-_101733874	281159	-	NM_183419|RNF19A|25897|ring finger protein 19A##BC062676|RNF19A|25897|ring finger protein 19A##BC105300|RNF19A|25897|ring finger protein 19A##AB271913|RNF19A|25897|ring finger protein 19A##AB029316|RNF19A|25897|ring finger protein 19A##NM_015435|RNF19A|25897|ring finger protein 19A##BC009500|GAPDHP62|100128961|glyceraldehyde 3 phosphate dehydrogenase pseudogene 62##BC035087|ANKRD46|157567|ankyrin repeat domain 46##BC050396|ANKRD46|157567|ankyrin repeat domain 46##AL832842|ANKRD46|157567|ankyrin repeat domain 46##AK095235|ANKRD46|157567|ankyrin repeat domain 46##BC060843|ANKRD46|157567|ankyrin repeat domain 46##AB077205|ANKRD46|157567|ankyrin repeat domain 46##NM_198401|ANKRD46|157567|ankyrin repeat domain 46##AK093906|SNX31|169166|sorting nexin 31##NM_152628|SNX31|169166|sorting nexin 31##Z48501|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ893508|PABPC1|26986|poly(A) binding protein, cytoplasmic 1##DQ896500|PABPC1|26986|poly(A) binding protein, cytoplasmic 1	0.0	
chr8	144141512	144141602	reg1037945.p1	3.410	+	TSC_hg19_v1_chr8_+_144120683 BC073830 AK094450 NM_173687 BC120993 BC063497	-20882	+	TSC_hg19_v1_chr8_+_144102304 BC119708 BC119709 AB529045 U56145	-39230	+	TSC_hg19_v1_chr8_+_144099945 NM_001127213 NM_002346 AK223074 AK129615 AK311983 BC003392 U42376 Z68179	-41615	+	NM_002347	99899	-	BC030192 AB012293 TSC_hg19_v1_chr8_-_144241700	100132	-	BC053355 TSC_hg19_v1_chr8_-_144241739 BC028894 NM_001135655	100182	-	BC073830|C8orf31|286122|chromosome 8 open reading frame 31##AK094450|C8orf31|286122|chromosome 8 open reading frame 31##NM_173687|C8orf31|286122|chromosome 8 open reading frame 31##BC120993|C8orf31|286122|chromosome 8 open reading frame 31##BC063497|C8orf31|286122|chromosome 8 open reading frame 31##BC119708|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC119709|LY6E|4061|lymphocyte antigen 6 complex, locus E##U56145|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_001127213|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002346|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK223074|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK129615|LY6E|4061|lymphocyte antigen 6 complex, locus E##AK311983|LY6E|4061|lymphocyte antigen 6 complex, locus E##BC003392|LY6E|4061|lymphocyte antigen 6 complex, locus E##U42376|LY6E|4061|lymphocyte antigen 6 complex, locus E##Z68179|LY6E|4061|lymphocyte antigen 6 complex, locus E##NM_002347|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC030192|LY6H|4062|lymphocyte antigen 6 complex, locus H##AB012293|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC053355|LY6H|4062|lymphocyte antigen 6 complex, locus H##BC028894|LY6H|4062|lymphocyte antigen 6 complex, locus H##NM_001135655|LY6H|4062|lymphocyte antigen 6 complex, locus H	0.0	
chr12	58153263	58153428	reg1031580.p1	3.409	+	TSC_hg19_v1_chr12_+_58148857 BC050397 NM_138396 BC036455	-4508	+	TSC_hg19_v1_chr12_-_58146135 BC005864 AK310724 M14505 NM_000075	-7172	-	TSC_hg19_v1_chr12_-_58146114 BC015669	-7232	-	TSC_hg19_v1_chr12_-_58159389 DQ925362 DQ925363 DQ925364 DQ925365 DQ925366 DQ925367 DQ925368 DQ925369 DQ925370 DQ925371	6081	-	AB005989 AF246895 CU674882 AF020192 BC136386 AK314953 BC001776 BC020267 AB005038 NM_000785	7554	-	TSC_hg19_v1_chr12_-_58165889 BC000550 X96698 AK223202 AK314851 NM_005371 NM_023033 Y18643 AB463884	12564	-	BC050397|MARCH9|92979|membrane-associated ring finger (C3HC4) 9##NM_138396|MARCH9|92979|membrane-associated ring finger (C3HC4) 9##BC036455|MARCH9|92979|membrane-associated ring finger (C3HC4) 9##BC005864|CDK4|1019|cyclin-dependent kinase 4##AK310724|CDK4|1019|cyclin-dependent kinase 4##M14505|CDK4|1019|cyclin-dependent kinase 4##NM_000075|CDK4|1019|cyclin-dependent kinase 4##BC015669|CDK4|1019|cyclin-dependent kinase 4##DQ925362|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##DQ925363|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##DQ925367|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##DQ925368|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##DQ925369|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##DQ925370|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##AB005989|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##AF246895|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##AF020192|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##BC136386|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##AK314953|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##BC001776|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##BC020267|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##AB005038|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##NM_000785|CYP27B1|1594|cytochrome P450, family 27, subfamily B, polypeptide 1##BC000550|METTL1|4234|methyltransferase like 1##X96698|METTL1|4234|methyltransferase like 1##AK223202|METTL1|4234|methyltransferase like 1##AK314851|METTL1|4234|methyltransferase like 1##NM_005371|METTL1|4234|methyltransferase like 1##NM_023033|METTL1|4234|methyltransferase like 1##Y18643|METTL1|4234|methyltransferase like 1	0.741964	CTCF.p2:7:0.727
chr12	82386383	82386481	reg1040145.p1	3.409	+	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	-233323	-	BC104912 BC143485 NM_001220475 NM_001220476 AK126971 TSC_hg19_v1_chr12_-_82152435 AB210009 NM_001220473 NM_001220474	-234061	-	AK294505 AK297372 AK299853 NM_001220477 NM_001220478	-394378	-	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	365744	-	NM_032230 TSC_hg19_v1_chr12_+_82752307 AK310231 AK026442 BC029120 CU688600	365877	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	694268	+	AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC104912|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC143485|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220475|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220476|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK126971|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AB210009|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220473|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220474|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59##NM_032230|C12orf26|84190|chromosome 12 open reading frame 26##AK310231|C12orf26|84190|chromosome 12 open reading frame 26##AK026442|C12orf26|84190|chromosome 12 open reading frame 26##BC029120|C12orf26|84190|chromosome 12 open reading frame 26##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2	0.026983	
chr14	35152209	35152324	reg1041536.p1	3.409	+	TSC_hg19_v1_chr14_-_35099347 BC001798 NM_021249 U83194 AF121856 AK292250 AB527564 AK308464 AK296213 NM_152233	-52911	-	TSC_hg19_v1_chr14_-_35008908 AB528732 AY869694 AK225467 AK000585 AK225477 AK225991 BC001245 AF217512 AY157300 AY157301 NM_018453	-143381	-	AB590824 TSC_hg19_v1_chr14_-_34931447 AK315409 AL080066 BC016805 BC016808 BC021701 AK001993 NM_138288 BC068480	-220779	-	BC011444 AK314157 NM_021914 AF134802	30722	-	TSC_hg19_v1_chr14_-_35183800 NM_001243645 AF134803 BC022364 BC022876 BC025683 NM_138638	31609	-	AB593178 TSC_hg19_v1_chr14_+_35343416 BC039097	191210	+	BC001798|SNX6|58533|sorting nexin 6##NM_021249|SNX6|58533|sorting nexin 6##U83194|SNX6|58533|sorting nexin 6##AF121856|SNX6|58533|sorting nexin 6##AK292250|SNX6|58533|sorting nexin 6##AK308464|SNX6|58533|sorting nexin 6##AK296213|SNX6|58533|sorting nexin 6##NM_152233|SNX6|58533|sorting nexin 6##AY869694|EAPP|55837|E2F-associated phosphoprotein##AK225467|EAPP|55837|E2F-associated phosphoprotein##AK000585|EAPP|55837|E2F-associated phosphoprotein##AK225477|EAPP|55837|E2F-associated phosphoprotein##AK225991|EAPP|55837|E2F-associated phosphoprotein##BC001245|EAPP|55837|E2F-associated phosphoprotein##AF217512|EAPP|55837|E2F-associated phosphoprotein##AY157300|EAPP|55837|E2F-associated phosphoprotein##AY157301|EAPP|55837|E2F-associated phosphoprotein##NM_018453|EAPP|55837|E2F-associated phosphoprotein##AK315409|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AL080066|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016805|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC016808|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC021701|SPTSSA|171546|serine palmitoyltransferase, small subunit A##AK001993|SPTSSA|171546|serine palmitoyltransferase, small subunit A##NM_138288|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC068480|SPTSSA|171546|serine palmitoyltransferase, small subunit A##BC011444|CFL2|1073|cofilin 2 (muscle)##AK314157|CFL2|1073|cofilin 2 (muscle)##NM_021914|CFL2|1073|cofilin 2 (muscle)##AF134802|CFL2|1073|cofilin 2 (muscle)##NM_001243645|CFL2|1073|cofilin 2 (muscle)##AF134803|CFL2|1073|cofilin 2 (muscle)##BC022364|CFL2|1073|cofilin 2 (muscle)##BC022876|CFL2|1073|cofilin 2 (muscle)##BC025683|CFL2|1073|cofilin 2 (muscle)##NM_138638|CFL2|1073|cofilin 2 (muscle)	0.0	
chr17	2142242	2142357	reg1044691.p1	3.409	+	DQ187313 NM_001098202	-182742	+	TSC_hg19_v1_chr17_+_1958396 NM_006497 BC030208	-183901	+	NM_080822 TSC_hg19_v1_chr17_+_1945315 BC040696 BC041170 AF073528 AF321875 CU691978 GQ129352 GQ129353	-196991	+	TSC_hg19_v1_chr17_-_2206814 AK024131 NM_001170957	64513	-	AB385377 AY145883 TSC_hg19_v1_chr17_-_2207028 NM_017575	64741	-	TSC_hg19_v1_chr17_+_2207247 AY743706 AK223120 AK023169 NM_021947 BC057234	64953	+	DQ187313|HIC1|3090|hypermethylated in cancer 1##NM_001098202|HIC1|3090|hypermethylated in cancer 1##NM_006497|HIC1|3090|hypermethylated in cancer 1##BC030208|HIC1|3090|hypermethylated in cancer 1##NM_080822|OVCA2|124641|ovarian tumor suppressor candidate 2##BC040696|OVCA2|124641|ovarian tumor suppressor candidate 2##BC041170|OVCA2|124641|ovarian tumor suppressor candidate 2##AF073528|OVCA2|124641|ovarian tumor suppressor candidate 2##AF321875|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129352|OVCA2|124641|ovarian tumor suppressor candidate 2##GQ129353|OVCA2|124641|ovarian tumor suppressor candidate 2##AK024131|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_001170957|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY145883|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##NM_017575|SMG6|23293|smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)##AY743706|SRR|63826|serine racemase##AK223120|SRR|63826|serine racemase##AK023169|SRR|63826|serine racemase##NM_021947|SRR|63826|serine racemase##BC057234|SRR|63826|serine racemase	0.0	
chr19	17337243	17337384	reg1027513.p2	3.409	+	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	-279	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	-11108	+	NM_018467 TSC_hg19_v1_chr19_+_17326162 AB097050 AF220052	-11141	+	AB307712 AB463945 AK298764 HQ692851 TSC_hg19_v1_chr19_-_17356214 BC063018 BC084544 BC002669 NM_005234 AK314961	18827	-	AB026290 AB040046 AK300617 AK096028 BC027910 NM_031941 AK315239 AK292031	38234	-	TSC_hg19_v1_chr19_+_17378251 AK308590 AK299493 NM_001033549 NM_014173 AF161491 AK025970 AK301193 BC006244 AL136692 AK225047	40892	+	BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##NM_018467|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB097050|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AF220052|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB307712|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AK298764|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##HQ692851|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC063018|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC084544|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC002669|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##NM_005234|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AK314961|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1##AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1##AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1##AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1##BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1##NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1##AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1##AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1##AK308590|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK299493|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_001033549|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_014173|BABAM1|29086|BRISC and BRCA1 A complex member 1##AF161491|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK025970|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK301193|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC006244|BABAM1|29086|BRISC and BRCA1 A complex member 1##AL136692|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK225047|BABAM1|29086|BRISC and BRCA1 A complex member 1	0.120829	
chr4	106526724	106526905	reg1042614.p1	3.409	+	AK000191 NM_001242729 NM_017700 BC105695	-53032	+	AM393754 AM393796 TSC_hg19_v1_chr4_-_106395220 AK294097 AL136655 AF161473 BC039462 BC008246 BC035569 BC012903 BC022803 AK289607 CU691190 AM393483 EU831414 EU831507 BC001065 BC021071 AB528841 AK297096 AK299125 AK299501 BC057219 AK000466 AB026722 AF217187 NM_006903 NM_176866 NM_176867 NM_176869	-131624	-	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	-458770	+	TSC_hg19_v1_chr4_-_106629819 BC014442 AK314939 NM_001142471 NM_020395	103027	-	TSC_hg19_v1_chr4_+_106629965 AK303547 BX648355 NM_024751 AK023335 AK225563	103159	+	AK292355 BC032942 NM_001031720	105153	+	AK000191|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_001242729|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##NM_017700|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##BC105695|ARHGEF38|54848|Rho guanine nucleotide exchange factor (GEF) 38##AM393754|PPA2|27068|pyrophosphatase (inorganic) 2##AM393796|PPA2|27068|pyrophosphatase (inorganic) 2##AK294097|PPA2|27068|pyrophosphatase (inorganic) 2##AL136655|PPA2|27068|pyrophosphatase (inorganic) 2##AF161473|PPA2|27068|pyrophosphatase (inorganic) 2##BC039462|PPA2|27068|pyrophosphatase (inorganic) 2##BC008246|PPA2|27068|pyrophosphatase (inorganic) 2##BC035569|PPA2|27068|pyrophosphatase (inorganic) 2##BC012903|PPA2|27068|pyrophosphatase (inorganic) 2##BC022803|PPA2|27068|pyrophosphatase (inorganic) 2##AK289607|PPA2|27068|pyrophosphatase (inorganic) 2##AM393483|PPA2|27068|pyrophosphatase (inorganic) 2##EU831414|PPA2|27068|pyrophosphatase (inorganic) 2##EU831507|PPA2|27068|pyrophosphatase (inorganic) 2##AK299125|PPA2|27068|pyrophosphatase (inorganic) 2##BC057219|PPA2|27068|pyrophosphatase (inorganic) 2##AK000466|PPA2|27068|pyrophosphatase (inorganic) 2##AB026722|PPA2|27068|pyrophosphatase (inorganic) 2##AF217187|PPA2|27068|pyrophosphatase (inorganic) 2##NM_006903|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176866|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176867|PPA2|27068|pyrophosphatase (inorganic) 2##NM_176869|PPA2|27068|pyrophosphatase (inorganic) 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2##BC014442|INTS12|57117|integrator complex subunit 12##AK314939|INTS12|57117|integrator complex subunit 12##NM_001142471|INTS12|57117|integrator complex subunit 12##NM_020395|INTS12|57117|integrator complex subunit 12##AK303547|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BX648355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_024751|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK023335|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK225563|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##AK292355|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##BC032942|GSTCD|79807|glutathione S-transferase, C-terminal domain containing##NM_001031720|GSTCD|79807|glutathione S-transferase, C-terminal domain containing	0.0	
chr4	181311060	181311165	reg1037093.p2	3.409	+	TSC_hg19_v1_chr4_-_178363633 NM_000027 NM_001171988	-2947469	-	AK303370 TSC_hg19_v1_chr4_-_178363567 BC012392 AK312982	-2947519	-	AB528385 CR541715 DQ891353 DQ894534 M64073 TSC_hg19_v1_chr4_-_178363547 X55762	-2947571	-	TSC_hg19_v1_chr4_+_183065111 AK308489	1754013	+	NM_001080477 HE578284 HE578285	1934042	+	TSC_hg19_v1_chr4_-_183838533 BC001286 BC088357 AK293135 AK313221 AK310788	2527418	-	NM_000027|AGA|175|aspartylglucosaminidase##NM_001171988|AGA|175|aspartylglucosaminidase##AK303370|AGA|175|aspartylglucosaminidase##BC012392|AGA|175|aspartylglucosaminidase##AK312982|AGA|175|aspartylglucosaminidase##CR541715|AGA|175|aspartylglucosaminidase##DQ891353|AGA|175|aspartylglucosaminidase##DQ894534|AGA|175|aspartylglucosaminidase##M64073|AGA|175|aspartylglucosaminidase##X55762|AGA|175|aspartylglucosaminidase##AK308489|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##NM_001080477|ODZ3|55714|odz, odd Oz/ten-m homolog 3 (Drosophila)##BC001286|DCTD|1635|dCMP deaminase##BC088357|DCTD|1635|dCMP deaminase##AK293135|DCTD|1635|dCMP deaminase##AK313221|DCTD|1635|dCMP deaminase##AK310788|DCTD|1635|dCMP deaminase	0.0	
chr5	139068822	139068911	reg1040554.p2	3.409	+	TSC_hg19_v1_chr5_+_139060403 DQ892589 DQ895807	-8474	+	AF151029 TSC_hg19_v1_chr5_+_139060229	-8654	+	BC002490 TSC_hg19_v1_chr5_+_139060088 AB463548 GQ379202 AK314420	-8782	+	TSC_hg19_v1_chr5_+_139175392 AL136559 NM_032289 BC038233	106540	+	BC103983 BC103984 BC114333 BC114334 TSC_hg19_v1_chr5_-_139422732	353862	-	U92987 TSC_hg19_v1_chr5_-_139422858 AB005060 AK124504 NM_001184935 NM_004883 NM_013981 NM_013982 NM_013983	353979	-	DQ892589|CXXC5|51523|CXXC finger protein 5##DQ895807|CXXC5|51523|CXXC finger protein 5##AF151029|CXXC5|51523|CXXC finger protein 5##BC002490|CXXC5|51523|CXXC finger protein 5##GQ379202|CXXC5|51523|CXXC finger protein 5##AK314420|CXXC5|51523|CXXC finger protein 5##AL136559|PSD2|84249|pleckstrin and Sec7 domain containing 2##NM_032289|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC038233|PSD2|84249|pleckstrin and Sec7 domain containing 2##BC103983|NRG2|9542|neuregulin 2##BC103984|NRG2|9542|neuregulin 2##BC114333|NRG2|9542|neuregulin 2##BC114334|NRG2|9542|neuregulin 2##U92987|NRG2|9542|neuregulin 2##AB005060|NRG2|9542|neuregulin 2##AK124504|NRG2|9542|neuregulin 2##NM_001184935|NRG2|9542|neuregulin 2##NM_004883|NRG2|9542|neuregulin 2##NM_013981|NRG2|9542|neuregulin 2##NM_013982|NRG2|9542|neuregulin 2##NM_013983|NRG2|9542|neuregulin 2	0.0	
chr5	159894916	159895096	reg1026541.p2	3.409	+	TSC_hg19_v1_chr5_+_159848929 BC101834 BC112071 AF075242	-46103	+	AK312209 AF062649 TSC_hg19_v1_chr5_+_159848864 BC026003 NM_004219 AF095287	-46152	+	TSC_hg19_v1_chr5_-_159846086 AY486334 AK314564 AK024875 BC010634 NM_006425	-48901	-	AK025130 TSC_hg19_v1_chr5_-_160112393	217333	-	AB018258 AK295081 AK090832 AX746642 NM_025153	384125	-	BC099705 BC099719 BC105639 NM_000813 NM_021911 S67368	1080120	-	BC101834|PTTG1|9232|pituitary tumor-transforming 1##BC112071|PTTG1|9232|pituitary tumor-transforming 1##AF075242|PTTG1|9232|pituitary tumor-transforming 1##AK312209|PTTG1|9232|pituitary tumor-transforming 1##AF062649|PTTG1|9232|pituitary tumor-transforming 1##BC026003|PTTG1|9232|pituitary tumor-transforming 1##NM_004219|PTTG1|9232|pituitary tumor-transforming 1##AF095287|PTTG1|9232|pituitary tumor-transforming 1##AY486334|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK314564|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK024875|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##BC010634|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##NM_006425|SLU7|10569|SLU7 splicing factor homolog (S. cerevisiae)##AK025130|ATP10B|23120|ATPase, class V, type 10B##AB018258|ATP10B|23120|ATPase, class V, type 10B##AK295081|ATP10B|23120|ATPase, class V, type 10B##AK090832|ATP10B|23120|ATPase, class V, type 10B##NM_025153|ATP10B|23120|ATPase, class V, type 10B##BC099705|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC099719|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##BC105639|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_000813|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##NM_021911|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2##S67368|GABRB2|2561|gamma-aminobutyric acid (GABA) A receptor, beta 2	0.0	
chr6	160391129	160391310	reg1028306.p2	3.409	+	TSC_hg19_v1_chr6_+_160390137 NM_000876 Y00285 J03528	-1086	+	BC069142 BC069581 BC110454 NM_002377 CU686912 CR542261	-63240	+	TSC_hg19_v1_chr6_+_160221313 AK097559 NM_173516 AK093139 AX747947 BC112246	-169876	+	NM_003057 NM_153187 X98332 BC126364 AK289887 U77086 AB527951 HQ258293	151695	+	CU689064 BC039899 AK290787 X98333 AB075951 BC030978 NM_003058	288656	-	BC144280 TSC_hg19_v1_chr6_+_160769404 AK314590 AJ001417 NM_021977	378175	+	NM_000876|IGF2R|3482|insulin-like growth factor 2 receptor##Y00285|IGF2R|3482|insulin-like growth factor 2 receptor##J03528|IGF2R|3482|insulin-like growth factor 2 receptor##BC069142|MAS1|4142|MAS1 oncogene##BC069581|MAS1|4142|MAS1 oncogene##BC110454|MAS1|4142|MAS1 oncogene##NM_002377|MAS1|4142|MAS1 oncogene##CR542261|MAS1|4142|MAS1 oncogene##AK097559|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_173516|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##AK093139|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##BC112246|PNLDC1|154197|poly(A)-specific ribonuclease (PARN)-like domain containing 1##NM_003057|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##NM_153187|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##X98332|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC126364|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##AK289887|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##U77086|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##HQ258293|SLC22A1|6580|solute carrier family 22 (organic cation transporter), member 1##BC039899|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AK290787|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##X98333|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##AB075951|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC030978|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##NM_003058|SLC22A2|6582|solute carrier family 22 (organic cation transporter), member 2##BC144280|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AK314590|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##AJ001417|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3##NM_021977|SLC22A3|6581|solute carrier family 22 (extraneuronal monoamine transporter), member 3	0.0	
chr6	47405645	47405788	reg1033085.p2	3.409	+	TSC_hg19_v1_chr6_-_47277647 NM_014452	-128021	-	AK315560 TSC_hg19_v1_chr6_-_47277645	-128071	-	AK001504 TSC_hg19_v1_chr6_-_47277640	-128076	-	TSC_hg19_v1_chr6_+_47445524 NM_012120	39799	+	TSC_hg19_v1_chr6_+_47445937 AF146277 BC069444	40200	+	AY140953 DQ315369 NM_153839	218557	+	NM_014452|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AK315560|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##AK001504|TNFRSF21|27242|tumor necrosis factor receptor superfamily, member 21##NM_012120|CD2AP|23607|CD2-associated protein##AF146277|CD2AP|23607|CD2-associated protein##BC069444|CD2AP|23607|CD2-associated protein##AY140953|GPR111|222611|G protein-coupled receptor 111##DQ315369|GPR111|222611|G protein-coupled receptor 111##NM_153839|GPR111|222611|G protein-coupled receptor 111	0.0	
chr8	6606113	6606180	reg1033890.p2	3.409	+	TSC_hg19_v1_chr8_+_6566162 AL136587 AB528060 AM392899 AM393058 DQ893436 DQ896747 AK002072 AK310545 BC068519	-39963	+	TSC_hg19_v1_chr8_+_6565916 AF375789 BC023550	-40206	+	TSC_hg19_v1_chr8_+_6565896 NM_018361 BC080537	-40255	+	AY534243 AY358489 AY534242 NM_207411	86946	-	BC033298 BC047677 X92744 U73945 NM_005218	129337	-	M98331 BC093951 BC093953 BC069667 BC069710 BC069728 BC069769 NM_001926	177439	-	AL136587|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM392899|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AM393058|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ893436|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##DQ896747|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK002072|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AK310545|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC068519|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AF375789|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC023550|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##NM_018361|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##BC080537|AGPAT5|55326|1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)##AY534243|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY358489|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##AY534242|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##NM_207411|XKR5|389610|XK, Kell blood group complex subunit-related family, member 5##BC033298|DEFB1|1672|defensin, beta 1##BC047677|DEFB1|1672|defensin, beta 1##X92744|DEFB1|1672|defensin, beta 1##U73945|DEFB1|1672|defensin, beta 1##NM_005218|DEFB1|1672|defensin, beta 1##M98331|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093951|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC093953|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069667|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069710|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069728|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##BC069769|DEFA6|1671|defensin, alpha 6, Paneth cell-specific##NM_001926|DEFA6|1671|defensin, alpha 6, Paneth cell-specific	0.0	
chr9	108457605	108457710	reg1038124.p1	3.409	+	TSC_hg19_v1_chr9_+_108456900 AK309686 CR457258 CU674010	-739	+	TSC_hg19_v1_chr9_+_108456821 AK001355 NM_018112 BC000049	-804	+	BC126373 BC126375 NM_005421 AB464288 HQ258056 BC069422	-32900	+	TSC_hg19_v1_chr9_+_109625347 BX648965 NM_021224 AK127803	1167707	+	TSC_hg19_v1_chr9_+_109686439 CR749850	1228812	+	NM_002874 TSC_hg19_v1_chr9_+_110045549 AK293532	1587875	+	AK309686|TMEM38B|55151|transmembrane protein 38B##CR457258|TMEM38B|55151|transmembrane protein 38B##AK001355|TMEM38B|55151|transmembrane protein 38B##NM_018112|TMEM38B|55151|transmembrane protein 38B##BC000049|TMEM38B|55151|transmembrane protein 38B##BC126373|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC126375|TAL2|6887|T-cell acute lymphocytic leukemia 2##NM_005421|TAL2|6887|T-cell acute lymphocytic leukemia 2##HQ258056|TAL2|6887|T-cell acute lymphocytic leukemia 2##BC069422|TAL2|6887|T-cell acute lymphocytic leukemia 2##BX648965|ZNF462|58499|zinc finger protein 462##NM_021224|ZNF462|58499|zinc finger protein 462##AK127803|ZNF462|58499|zinc finger protein 462##CR749850|ZNF462|58499|zinc finger protein 462##NM_002874|RAD23B|5887|RAD23 homolog B (S. cerevisiae)##AK293532|RAD23B|5887|RAD23 homolog B (S. cerevisiae)	0.0	
chr9	37465976	37466086	reg1042529.p1	3.409	+	TSC_hg19_v1_chr9_-_37465448 AK292404	-590	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	-636	-	BC010007 TSC_hg19_v1_chr9_-_37465267	-771	-	TSC_hg19_v1_chr9_+_37485944 BC014331 AK023452 AK302345 AK303167 NM_022490 AK301347 AK024032 AK225050 BC017766 BC001337 CR457313 AK091294 AX746899	19999	+	AF174598 AF176705 NM_012166 TSC_hg19_v1_chr9_-_37576280	110234	-	CR627326 AB435233 TSC_hg19_v1_chr9_-_37592574 BC034247	126488	-	AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5##BC010007|ZBTB5|9925|zinc finger and BTB domain containing 5##BC014331|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK023452|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK302345|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK303167|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##NM_022490|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK301347|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK024032|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK225050|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC017766|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC001337|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##CR457313|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK091294|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AF174598|FBXO10|26267|F-box protein 10##AF176705|FBXO10|26267|F-box protein 10##NM_012166|FBXO10|26267|F-box protein 10##AB435233|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC034247|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)	0.025272	
chr1	114636323	114636427	reg1037886.p2	3.408	+	AY358954 NM_020190 AY464015 AK092766 AX747716 AK075369 TSC_hg19_v1_chr1_+_114522099 AK297902 AF201945 AK223221 BC009920 AK222471 AK075479 AK075353 AK075544 AB590196 DQ892781 DQ896028 CU679529	-114292	+	BC036057 NM_181358	-139877	+	BC028408 NM_198269	-142609	+	AK056448 NM_205848	58686	-	BC044948 NM_001253772	60096	-	TSC_hg19_v1_chr1_-_115053724 AB384564 AB029036	417335	-	AY358954|OLFML3|56944|olfactomedin-like 3##NM_020190|OLFML3|56944|olfactomedin-like 3##AY464015|OLFML3|56944|olfactomedin-like 3##AK092766|OLFML3|56944|olfactomedin-like 3##AK075369|OLFML3|56944|olfactomedin-like 3##AK297902|OLFML3|56944|olfactomedin-like 3##AF201945|OLFML3|56944|olfactomedin-like 3##AK223221|OLFML3|56944|olfactomedin-like 3##BC009920|OLFML3|56944|olfactomedin-like 3##AK222471|OLFML3|56944|olfactomedin-like 3##AK075479|OLFML3|56944|olfactomedin-like 3##AK075353|OLFML3|56944|olfactomedin-like 3##AK075544|OLFML3|56944|olfactomedin-like 3##DQ892781|OLFML3|56944|olfactomedin-like 3##DQ896028|OLFML3|56944|olfactomedin-like 3##BC036057|HIPK1|204851|homeodomain interacting protein kinase 1##NM_181358|HIPK1|204851|homeodomain interacting protein kinase 1##BC028408|HIPK1|204851|homeodomain interacting protein kinase 1##NM_198269|HIPK1|204851|homeodomain interacting protein kinase 1##AK056448|SYT6|148281|synaptotagmin VI##NM_205848|SYT6|148281|synaptotagmin VI##BC044948|SYT6|148281|synaptotagmin VI##NM_001253772|SYT6|148281|synaptotagmin VI##AB029036|TRIM33|51592|tripartite motif containing 33	0.894595	CTCF.p2:-7:0.895
chr12	101721524	101721591	reg1038842.p1	3.408	+	TSC_hg19_v1_chr12_+_101673904 NM_014503 AK307934 AJ006778	-47652	+	AK313788 AF536216 AY081220 NM_145913	-117558	-	NM_178826 TSC_hg19_v1_chr12_+_101188522 AK091591 AX747079 AK316105 AK293810	-533003	+	TSC_hg19_v1_chr12_-_101801573 AK311793 AK302911 AK299062 BC007000 BX537387 NM_001177	79986	-	AK296681 NM_002465 NM_206819 NM_206820 NM_206821 AK056587 AK292976 AK295727 AK303401 BC015187 BC030980 BC065720 TSC_hg19_v1_chr12_+_101988748 BC092418 X66276 X73114 AL831993 AL832000 AL832332 AL832350 AL832354 AL832456 BC117217 BC143495 BC143502 BC143503 BC143504 AL834249 BX649073 AB385254 AM392734 EU831907 EU832001	267239	+	TSC_hg19_v1_chr12_+_102091462 NM_020244 BC050429 AK075211 AK093067 BC020819 AF195623 AF195624 AK226127 AF047431	370065	+	NM_014503|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK307934|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AJ006778|UTP20|27340|UTP20, small subunit (SSU) processome component, homolog (yeast)##AK313788|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AF536216|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##AY081220|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_145913|SLC5A8|160728|solute carrier family 5 (iodide transporter), member 8##NM_178826|ANO4|121601|anoctamin 4##AK091591|ANO4|121601|anoctamin 4##AK316105|ANO4|121601|anoctamin 4##AK293810|ANO4|121601|anoctamin 4##AK311793|ARL1|400|ADP-ribosylation factor-like 1##AK302911|ARL1|400|ADP-ribosylation factor-like 1##AK299062|ARL1|400|ADP-ribosylation factor-like 1##BC007000|ARL1|400|ADP-ribosylation factor-like 1##BX537387|ARL1|400|ADP-ribosylation factor-like 1##NM_001177|ARL1|400|ADP-ribosylation factor-like 1##AK296681|MYBPC1|4604|myosin binding protein C, slow type##NM_002465|MYBPC1|4604|myosin binding protein C, slow type##NM_206819|MYBPC1|4604|myosin binding protein C, slow type##NM_206820|MYBPC1|4604|myosin binding protein C, slow type##NM_206821|MYBPC1|4604|myosin binding protein C, slow type##AK056587|MYBPC1|4604|myosin binding protein C, slow type##AK292976|MYBPC1|4604|myosin binding protein C, slow type##AK295727|MYBPC1|4604|myosin binding protein C, slow type##AK303401|MYBPC1|4604|myosin binding protein C, slow type##BC015187|MYBPC1|4604|myosin binding protein C, slow type##BC030980|MYBPC1|4604|myosin binding protein C, slow type##BC065720|MYBPC1|4604|myosin binding protein C, slow type##BC092418|MYBPC1|4604|myosin binding protein C, slow type##X66276|MYBPC1|4604|myosin binding protein C, slow type##X73114|MYBPC1|4604|myosin binding protein C, slow type##AL831993|MYBPC1|4604|myosin binding protein C, slow type##AL832000|MYBPC1|4604|myosin binding protein C, slow type##AL832332|MYBPC1|4604|myosin binding protein C, slow type##AL832350|MYBPC1|4604|myosin binding protein C, slow type##AL832354|MYBPC1|4604|myosin binding protein C, slow type##AL832456|MYBPC1|4604|myosin binding protein C, slow type##BC117217|MYBPC1|4604|myosin binding protein C, slow type##BC143495|MYBPC1|4604|myosin binding protein C, slow type##BC143502|MYBPC1|4604|myosin binding protein C, slow type##BC143503|MYBPC1|4604|myosin binding protein C, slow type##BC143504|MYBPC1|4604|myosin binding protein C, slow type##AL834249|MYBPC1|4604|myosin binding protein C, slow type##BX649073|MYBPC1|4604|myosin binding protein C, slow type##AM392734|MYBPC1|4604|myosin binding protein C, slow type##EU831907|MYBPC1|4604|myosin binding protein C, slow type##EU832001|MYBPC1|4604|myosin binding protein C, slow type##NM_020244|CHPT1|56994|choline phosphotransferase 1##BC050429|CHPT1|56994|choline phosphotransferase 1##AK075211|CHPT1|56994|choline phosphotransferase 1##AK093067|CHPT1|56994|choline phosphotransferase 1##BC020819|CHPT1|56994|choline phosphotransferase 1##AF195623|CHPT1|56994|choline phosphotransferase 1##AF195624|CHPT1|56994|choline phosphotransferase 1##AK226127|CHPT1|56994|choline phosphotransferase 1##AF047431|CHPT1|56994|choline phosphotransferase 1	0.0	
chr12	82254064	82254191	reg1038513.p1	3.408	+	AK307524 AF034799 NM_003625 TSC_hg19_v1_chr12_-_82153127	-101018	-	BC104912 BC143485 NM_001220475 NM_001220476 AK126971 TSC_hg19_v1_chr12_-_82152435 AB210009 NM_001220473 NM_001220474	-101756	-	AK294505 AK297372 AK299853 NM_001220477 NM_001220478	-262073	-	CU676598 TSC_hg19_v1_chr12_-_82752167 BC020647 AF213377 AF161477 AK001156 AK225139 NM_014167	498049	-	NM_032230 TSC_hg19_v1_chr12_+_82752307 AK310231 AK026442 BC029120 CU688600	498182	+	TSC_hg19_v1_chr12_+_83080684 AX795392 AX795396 BC098572	826573	+	AK307524|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AF034799|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_003625|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC104912|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC143485|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220475|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220476|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK126971|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AB210009|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220473|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220474|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK294505|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK297372|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##AK299853|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220477|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##NM_001220478|PPFIA2|8499|protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2##BC020647|CCDC59|29080|coiled-coil domain containing 59##AF213377|CCDC59|29080|coiled-coil domain containing 59##AF161477|CCDC59|29080|coiled-coil domain containing 59##AK001156|CCDC59|29080|coiled-coil domain containing 59##AK225139|CCDC59|29080|coiled-coil domain containing 59##NM_014167|CCDC59|29080|coiled-coil domain containing 59##NM_032230|C12orf26|84190|chromosome 12 open reading frame 26##AK310231|C12orf26|84190|chromosome 12 open reading frame 26##AK026442|C12orf26|84190|chromosome 12 open reading frame 26##BC029120|C12orf26|84190|chromosome 12 open reading frame 26##AX795392|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2##BC098572|TMTC2|160335|transmembrane and tetratricopeptide repeat containing 2	0.0	
chr14	46279831	46279955	reg1031941.p2	3.408	+	AB067490 NM_018353 TSC_hg19_v1_chr14_-_45722681	-557247	-	TSC_hg19_v1_chr14_-_45722374 BC051885 BC065544 AK002048	-557526	-	TSC_hg19_v1_chr14_+_45605166 DQ140356 BC140776 BC144511 CU690276	-674704	+	AM392934 AB528225 AB063608 BC066312 AK130863 BC014310 NM_080746	841090	-	BC028193 NM_182830	1532522	-	AK309211 NM_001113498	1864263	-	AB067490|MIS18BP1|55320|MIS18 binding protein 1##NM_018353|MIS18BP1|55320|MIS18 binding protein 1##BC051885|MIS18BP1|55320|MIS18 binding protein 1##BC065544|MIS18BP1|55320|MIS18 binding protein 1##AK002048|MIS18BP1|55320|MIS18 binding protein 1##DQ140356|FANCM|57697|Fanconi anemia, complementation group M##BC140776|FANCM|57697|Fanconi anemia, complementation group M##BC144511|FANCM|57697|Fanconi anemia, complementation group M##AM392934|RPL10L|140801|ribosomal protein L10-like##AB063608|RPL10L|140801|ribosomal protein L10-like##BC066312|RPL10L|140801|ribosomal protein L10-like##AK130863|RPL10L|140801|ribosomal protein L10-like##BC014310|RPL10L|140801|ribosomal protein L10-like##NM_080746|RPL10L|140801|ribosomal protein L10-like##BC028193|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_182830|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##AK309211|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2##NM_001113498|MDGA2|161357|MAM domain containing glycosylphosphatidylinositol anchor 2	0.0	
chr14	68866888	68867038	reg1041534.p1	3.408	+	AK309787 NM_002877 NM_133509 NM_133510 U92074 U84138 TSC_hg19_v1_chr14_+_68286537 Y15571 AK310686 BC030219 BX161515 BX248766 BX248061	-580443	+	AB425197 BC144594 TSC_hg19_v1_chr14_-_68283303 BX537886 AK304428 BX648036 BX648683 CR749276 CR749365 AK308233 NM_015346	-583664	-	AK315462 NM_152443	-698361	+	AB385016 BT019468 X99404 DQ891349 DQ894529 BC018340 AK294363 TSC_hg19_v1_chr14_-_69259782 AK303917	392757	-	NM_001244698 NM_004926	393667	-	NM_001244701 AB528867	396021	-	AK309787|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_002877|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133509|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##NM_133510|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U92074|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##U84138|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##Y15571|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AK310686|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BC030219|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX161515|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248766|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##BX248061|RAD51B|5890|RAD51 homolog B (S. cerevisiae)##AB425197|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BC144594|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX537886|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK304428|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648036|ZFYVE26|23503|zinc finger, FYVE domain containing 26##BX648683|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749276|ZFYVE26|23503|zinc finger, FYVE domain containing 26##CR749365|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK308233|ZFYVE26|23503|zinc finger, FYVE domain containing 26##NM_015346|ZFYVE26|23503|zinc finger, FYVE domain containing 26##AK315462|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##NM_152443|RDH12|145226|retinol dehydrogenase 12 (all-trans/9-cis/11-cis)##BT019468|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##X99404|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ891349|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##DQ894529|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##BC018340|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK294363|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##AK303917|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244698|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_004926|ZFP36L1|677|zinc finger protein 36, C3H type-like 1##NM_001244701|ZFP36L1|677|zinc finger protein 36, C3H type-like 1	0.0	
chr15	80311345	80311440	reg1036707.p1	3.408	+	AB464467 BT007103 CR541937 CR541962 DQ891109 DQ894290 AY234180 U27467 AL110097 BC016281 AK304026 TSC_hg19_v1_chr15_-_80263526 U29680 Y09397 NM_001114735 NM_004049	-47841	-	TSC_hg19_v1_chr15_-_80216042 AF249277	-95354	-	NM_001100880 NM_001199757	-95729	-	NM_001242911 NM_001242912 NM_001242917 NM_001242918 NM_019006 TSC_hg19_v1_chr15_+_80351970 AF061739	40550	+	TSC_hg19_v1_chr15_+_80352031 BC005283 AK312646	40637	+	TSC_hg19_v1_chr15_+_80352046 AL136598	40675	+	BT007103|BCL2A1|597|BCL2-related protein A1##CR541937|BCL2A1|597|BCL2-related protein A1##CR541962|BCL2A1|597|BCL2-related protein A1##DQ891109|BCL2A1|597|BCL2-related protein A1##DQ894290|BCL2A1|597|BCL2-related protein A1##AY234180|BCL2A1|597|BCL2-related protein A1##U27467|BCL2A1|597|BCL2-related protein A1##AL110097|BCL2A1|597|BCL2-related protein A1##BC016281|BCL2A1|597|BCL2-related protein A1##U29680|BCL2A1|597|BCL2-related protein A1##Y09397|BCL2A1|597|BCL2-related protein A1##NM_001114735|BCL2A1|597|BCL2-related protein A1##NM_004049|BCL2A1|597|BCL2-related protein A1##AF249277|ST20|400410|suppressor of tumorigenicity 20##NM_001100880|ST20|400410|suppressor of tumorigenicity 20##NM_001199757|ST20|400410|suppressor of tumorigenicity 20##NM_001242911|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242912|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242917|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_001242918|ZFAND6|54469|zinc finger, AN1-type domain 6##NM_019006|ZFAND6|54469|zinc finger, AN1-type domain 6##AF061739|ZFAND6|54469|zinc finger, AN1-type domain 6##BC005283|ZFAND6|54469|zinc finger, AN1-type domain 6##AK312646|ZFAND6|54469|zinc finger, AN1-type domain 6##AL136598|ZFAND6|54469|zinc finger, AN1-type domain 6	0.0	
chr17	8804314	8804403	reg1039367.p2	3.408	+	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-33374	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-101806	-	BC146949 BC146966 BC171861 NM_001128076	-142482	-	AY725853 AF128881 NM_014308	11458	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	64623	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	120609	+	BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##BC146949|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC146966|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##BC171861|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##NM_001128076|SPDYE4|388333|speedy homolog E4 (Xenopus laevis)##AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1	0.0	
chr19	51598094	51598205	reg1032640.p1	3.408	+	BC114614 NM_022046	-10666	-	AB108823 AB108824 AB451465 AB590885 AY923171 AY923172 AY923173 BC069334 BC069543 NM_015596 AL050220	-29804	-	AY358524 BC136341 BC143988 BC143990 BC143991 NM_019598 NM_145894 NM_145895	-60078	-	TSC_hg19_v1_chr19_-_51611637 AK291173 NM_145232	13492	-	NM_001198558 NM_014441 AF227924 AK297043 BC035365 AB026265 AY358913 AK315272 AF247180 DQ892476 DQ895688	30070	+	TSC_hg19_v1_chr19_+_51645559 NM_014385 NM_016543 AK314875 AF193441 BC028150 AJ007395 AF178981 AF170485 AJ130710 AJ130711 AJ130712 AJ130713	47442	+	BC114614|KLK14|43847|kallikrein-related peptidase 14##NM_022046|KLK14|43847|kallikrein-related peptidase 14##AB108823|KLK13|26085|kallikrein-related peptidase 13##AB108824|KLK13|26085|kallikrein-related peptidase 13##AB451465|KLK13|26085|kallikrein-related peptidase 13##AY923171|KLK13|26085|kallikrein-related peptidase 13##AY923172|KLK13|26085|kallikrein-related peptidase 13##AY923173|KLK13|26085|kallikrein-related peptidase 13##BC069334|KLK13|26085|kallikrein-related peptidase 13##BC069543|KLK13|26085|kallikrein-related peptidase 13##NM_015596|KLK13|26085|kallikrein-related peptidase 13##AL050220|KLK13|26085|kallikrein-related peptidase 13##AY358524|KLK12|43849|kallikrein-related peptidase 12##BC136341|KLK12|43849|kallikrein-related peptidase 12##BC143988|KLK12|43849|kallikrein-related peptidase 12##BC143990|KLK12|43849|kallikrein-related peptidase 12##BC143991|KLK12|43849|kallikrein-related peptidase 12##NM_019598|KLK12|43849|kallikrein-related peptidase 12##NM_145894|KLK12|43849|kallikrein-related peptidase 12##NM_145895|KLK12|43849|kallikrein-related peptidase 12##AK291173|CTU1|90353|cytosolic thiouridylase subunit 1 homolog (S. pombe)##NM_145232|CTU1|90353|cytosolic thiouridylase subunit 1 homolog (S. pombe)##NM_001198558|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##NM_014441|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AF227924|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK297043|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##BC035365|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AB026265|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AY358913|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AK315272|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##AF247180|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##DQ892476|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##DQ895688|SIGLEC9|27180|sialic acid binding Ig-like lectin 9##NM_014385|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##NM_016543|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AK314875|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF193441|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##BC028150|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ007395|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF178981|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AF170485|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130710|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130711|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130712|SIGLEC7|27036|sialic acid binding Ig-like lectin 7##AJ130713|SIGLEC7|27036|sialic acid binding Ig-like lectin 7	0.981404	CTCF.p2:29:0.981
chr20	30305395	30305536	reg1041172.p1	3.408	+	BC032024 TSC_hg19_v1_chr20_-_30288101	-17368	-	AF257180 NM_032609 BC057779	-79763	+	TSC_hg19_v1_chr20_+_30193091 NM_002165 NM_181353 AK313786 BC012420 BC000613 S78986 X77956 AK291152 D13889 D13890 S78825 AB463776 CU680316 DQ891293 DQ893342 DQ894477 DQ896657 EU176458 EU176468 EU176808 BT007443	-112329	+	TSC_hg19_v1_chr20_-_30310672 AY263336 BC019307 NM_001191 NM_138578 AK290968 AY263335 CR936637	5201	-	TSC_hg19_v1_chr20_-_30311772 BX647525	6275	-	NM_012112 TSC_hg19_v1_chr20_+_30327092 AK312549 AB024704 AF098158 AF287265 BC020207 BC004136	21572	+	AF257180|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_032609|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##BC057779|COX4I2|84701|cytochrome c oxidase subunit IV isoform 2 (lung)##NM_002165|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##NM_181353|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK313786|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC012420|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BC000613|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78986|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##X77956|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AK291152|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13889|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##D13890|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##S78825|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ891293|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ893342|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ894477|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##DQ896657|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176458|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176468|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##EU176808|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##BT007443|ID1|3397|inhibitor of DNA binding 1, dominant negative helix-loop-helix protein##AY263336|BCL2L1|598|BCL2-like 1##BC019307|BCL2L1|598|BCL2-like 1##NM_001191|BCL2L1|598|BCL2-like 1##NM_138578|BCL2L1|598|BCL2-like 1##AK290968|BCL2L1|598|BCL2-like 1##AY263335|BCL2L1|598|BCL2-like 1##CR936637|BCL2L1|598|BCL2-like 1##BX647525|BCL2L1|598|BCL2-like 1##NM_012112|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AK312549|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AB024704|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF098158|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##AF287265|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC020207|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)##BC004136|TPX2|22974|TPX2, microtubule-associated, homolog (Xenopus laevis)	0.0	
chr20	46045391	46045504	reg1025042.p1	3.408	+	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	-59959	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	-68800	-	TSC_hg19_v1_chr20_-_45927496 BC030721	-117878	-	NM_001174087 NM_001174088 NM_006534 NM_181659 TSC_hg19_v1_chr20_+_46130607 BC092516	85175	+	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	85237	+	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	369305	-	AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_001174087|NCOA3|8202|nuclear receptor coactivator 3##NM_001174088|NCOA3|8202|nuclear receptor coactivator 3##NM_006534|NCOA3|8202|nuclear receptor coactivator 3##NM_181659|NCOA3|8202|nuclear receptor coactivator 3##BC092516|NCOA3|8202|nuclear receptor coactivator 3##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2	0.0	
chr2	219757344	219757429	reg1030179.p1	3.408	+	BC052234 AK024363 NM_025216 BC040026	-12123	+	AY009401 NM_006522 AK075522 AB059570 DQ890770 BC004329 AB590154 BT007456	-32734	+	AJ249977 BC098102 BC098255 BC098277 BC098306 NM_017431 AK300078 AK300687 AK309865	-60868	-	TSC_hg19_v1_chr2_+_219824381 BC041771 NM_003936 U34051	67023	+	BC023511 NM_017521 Y08976	92939	-	AF166331 NM_005209 BC006285 NM_057093 NM_057094	100737	-	BC052234|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AK024363|WNT10A|80326|wingless-type MMTV integration site family, member 10A##NM_025216|WNT10A|80326|wingless-type MMTV integration site family, member 10A##BC040026|WNT10A|80326|wingless-type MMTV integration site family, member 10A##AY009401|WNT6|7475|wingless-type MMTV integration site family, member 6##NM_006522|WNT6|7475|wingless-type MMTV integration site family, member 6##AK075522|WNT6|7475|wingless-type MMTV integration site family, member 6##AB059570|WNT6|7475|wingless-type MMTV integration site family, member 6##DQ890770|WNT6|7475|wingless-type MMTV integration site family, member 6##BC004329|WNT6|7475|wingless-type MMTV integration site family, member 6##BT007456|WNT6|7475|wingless-type MMTV integration site family, member 6##AJ249977|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098102|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098255|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098277|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC098306|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##NM_017431|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300078|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK300687|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##AK309865|PRKAG3|53632|protein kinase, AMP-activated, gamma 3 non-catalytic subunit##BC041771|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##NM_003936|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##U34051|CDK5R2|8941|cyclin-dependent kinase 5, regulatory subunit 2 (p39)##BC023511|FEV|54738|FEV (ETS oncogene family)##NM_017521|FEV|54738|FEV (ETS oncogene family)##Y08976|FEV|54738|FEV (ETS oncogene family)##AF166331|CRYBA2|1412|crystallin, beta A2##NM_005209|CRYBA2|1412|crystallin, beta A2##BC006285|CRYBA2|1412|crystallin, beta A2##NM_057093|CRYBA2|1412|crystallin, beta A2##NM_057094|CRYBA2|1412|crystallin, beta A2	0.351605	CTCF.p2:104:0.352
chr2	32234519	32234585	reg1032757.p2	3.408	+	EU832809 GQ129244 HQ258121 M74047 EF560740 AK316597 BC112252 BC113641 NM_000348	-428549	-	TSC_hg19_v1_chr2_-_31637599 NM_000379	-596941	-	TSC_hg19_v1_chr2_-_31637569 U39487 D11456 U06117	-596981	-	TSC_hg19_v1_chr2_-_32235713 AF363446 BC018733 NM_001137602 NM_015955	1106	-	TSC_hg19_v1_chr2_-_32235732 AB041018	1176	-	TSC_hg19_v1_chr2_-_32235815 BC070046	1270	-	EU832809|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##GQ129244|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##HQ258121|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##M74047|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##EF560740|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##AK316597|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC112252|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##BC113641|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000348|SRD5A2|6716|steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)##NM_000379|XDH|7498|xanthine dehydrogenase##U39487|XDH|7498|xanthine dehydrogenase##D11456|XDH|7498|xanthine dehydrogenase##U06117|XDH|7498|xanthine dehydrogenase##AF363446|MEMO1|51072|mediator of cell motility 1##BC018733|MEMO1|51072|mediator of cell motility 1##NM_001137602|MEMO1|51072|mediator of cell motility 1##NM_015955|MEMO1|51072|mediator of cell motility 1##AB041018|MEMO1|51072|mediator of cell motility 1##BC070046|MEMO1|51072|mediator of cell motility 1	0.0	
chr3	105661202	105661303	reg1044638.p1	3.408	+	TSC_hg19_v1_chr3_-_105587818 AK094184 AK292792 BC032851 NM_170662 U26710 U26711 U26712	-73445	-	CR749655 TSC_hg19_v1_chr3_-_105421064	-240198	-	TSC_hg19_v1_chr3_+_105085752 AK316113 BC017840 BC057809 BC041127 AL833702 AY644765	-575430	+	TSC_hg19_v1_chr3_-_106959482 BC036229	1298227	-	TSC_hg19_v1_chr3_+_106959546 AK309100 BC039550 AK055934	1298340	+	AK058091 NM_032600 BC030780 AF367469 CU689006 DQ890829 DQ890830 DQ893985	1435058	+	AK094184|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK292792|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##BC032851|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##NM_170662|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26710|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26711|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##U26712|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##CR749655|CBLB|868|Cas-Br-M (murine) ecotropic retroviral transforming sequence b##AK316113|ALCAM|214|activated leukocyte cell adhesion molecule##BC057809|ALCAM|214|activated leukocyte cell adhesion molecule##BC041127|ALCAM|214|activated leukocyte cell adhesion molecule##AL833702|ALCAM|214|activated leukocyte cell adhesion molecule##AY644765|ALCAM|214|activated leukocyte cell adhesion molecule##AK309100|LOC344595|344595|uncharacterized LOC344595##BC039550|LOC344595|344595|uncharacterized LOC344595##AK055934|LOC344595|344595|uncharacterized LOC344595##AK058091|CCDC54|84692|coiled-coil domain containing 54##NM_032600|CCDC54|84692|coiled-coil domain containing 54##BC030780|CCDC54|84692|coiled-coil domain containing 54##AF367469|CCDC54|84692|coiled-coil domain containing 54##DQ890829|CCDC54|84692|coiled-coil domain containing 54##DQ890830|CCDC54|84692|coiled-coil domain containing 54##DQ893985|CCDC54|84692|coiled-coil domain containing 54	0.0	
chr3	112692689	112692810	reg1038738.p2	3.408	+	BC144504 BC144507 AY284976 AY552790 NM_001008784 NM_001199215	-127957	-	AY548106 AY548107 TSC_hg19_v1_chr3_-_112359991 BC110842 AY526612 NM_199511 NM_199512 AK304561	-332772	-	BX647117 TSC_hg19_v1_chr3_-_112359888 BC116178 BC116179 AY333429 AF506819	-332866	-	AF283760 BC069661 BC069721 BC069743 AF495380 AF497548 AF497549 AF497550 BC093890 BC143393 AK304426 AK293071 AY284975 AK126349 NM_138806 NM_138939 NM_138940 NM_170780 AY358910	1086	-	TSC_hg19_v1_chr3_+_112709777 AK292651	17029	+	NM_014170 NM_138485 BC037163 TSC_hg19_v1_chr3_+_112709842 BC000003 AF161484 BC010137 AK289611 CU691454 DQ892307 DQ895506	17073	+	BC144504|CD200R1L|344807|CD200 receptor 1-like##BC144507|CD200R1L|344807|CD200 receptor 1-like##AY284976|CD200R1L|344807|CD200 receptor 1-like##AY552790|CD200R1L|344807|CD200 receptor 1-like##NM_001008784|CD200R1L|344807|CD200 receptor 1-like##NM_001199215|CD200R1L|344807|CD200 receptor 1-like##AY548106|CCDC80|151887|coiled-coil domain containing 80##AY548107|CCDC80|151887|coiled-coil domain containing 80##BC110842|CCDC80|151887|coiled-coil domain containing 80##AY526612|CCDC80|151887|coiled-coil domain containing 80##NM_199511|CCDC80|151887|coiled-coil domain containing 80##NM_199512|CCDC80|151887|coiled-coil domain containing 80##AK304561|CCDC80|151887|coiled-coil domain containing 80##BX647117|CCDC80|151887|coiled-coil domain containing 80##BC116178|CCDC80|151887|coiled-coil domain containing 80##BC116179|CCDC80|151887|coiled-coil domain containing 80##AY333429|CCDC80|151887|coiled-coil domain containing 80##AF506819|CCDC80|151887|coiled-coil domain containing 80##AF283760|CD200R1|131450|CD200 receptor 1##BC069661|CD200R1|131450|CD200 receptor 1##BC069721|CD200R1|131450|CD200 receptor 1##BC069743|CD200R1|131450|CD200 receptor 1##AF495380|CD200R1|131450|CD200 receptor 1##AF497548|CD200R1|131450|CD200 receptor 1##AF497549|CD200R1|131450|CD200 receptor 1##AF497550|CD200R1|131450|CD200 receptor 1##BC093890|CD200R1|131450|CD200 receptor 1##BC143393|CD200R1|131450|CD200 receptor 1##AK304426|CD200R1|131450|CD200 receptor 1##AK293071|CD200R1|131450|CD200 receptor 1##AY284975|CD200R1|131450|CD200 receptor 1##AK126349|CD200R1|131450|CD200 receptor 1##NM_138806|CD200R1|131450|CD200 receptor 1##NM_138939|CD200R1|131450|CD200 receptor 1##NM_138940|CD200R1|131450|CD200 receptor 1##NM_170780|CD200R1|131450|CD200 receptor 1##AY358910|CD200R1|131450|CD200 receptor 1##AK292651|GTPBP8|29083|GTP-binding protein 8 (putative)##NM_014170|GTPBP8|29083|GTP-binding protein 8 (putative)##NM_138485|GTPBP8|29083|GTP-binding protein 8 (putative)##BC037163|GTPBP8|29083|GTP-binding protein 8 (putative)##BC000003|GTPBP8|29083|GTP-binding protein 8 (putative)##AF161484|GTPBP8|29083|GTP-binding protein 8 (putative)##BC010137|GTPBP8|29083|GTP-binding protein 8 (putative)##AK289611|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ892307|GTPBP8|29083|GTP-binding protein 8 (putative)##DQ895506|GTPBP8|29083|GTP-binding protein 8 (putative)	0.0	
chr4	143364773	143364856	reg1036913.p1	3.408	+	AK290619 NM_000585 NM_172175 BC018149 U14407	-807048	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-1222728	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-1222759	+	NM_001101669 NM_003866	402789	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	741250	+	TSC_hg19_v1_chr4_+_144106101 AL833976 AK126943 BC068975	741311	+	AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38##AL833976|USP38|84640|ubiquitin specific peptidase 38##AK126943|USP38|84640|ubiquitin specific peptidase 38##BC068975|USP38|84640|ubiquitin specific peptidase 38	0.065866	
chr4	36843906	36844051	reg1033863.p2	3.408	+	BC157885 NM_001170700	-558335	+	AK131492 NM_001136536 AK304357 AK316523	-560732	+	AY049733 TSC_hg19_v1_chr4_-_36246137 NM_015230	-597941	-	NM_001144990	402711	+	NM_001104629 BC037906	611597	+	AK001879 NM_018302 AK225192	741891	+	BC157885|DTHD1|401124|death domain containing 1##NM_001170700|DTHD1|401124|death domain containing 1##AK131492|DTHD1|401124|death domain containing 1##NM_001136536|DTHD1|401124|death domain containing 1##AK304357|DTHD1|401124|death domain containing 1##AK316523|DTHD1|401124|death domain containing 1##AY049733|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_015230|ARAP2|116984|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2##NM_001144990|KIAA1239|57495|KIAA1239##NM_001104629|C4orf19|55286|chromosome 4 open reading frame 19##BC037906|C4orf19|55286|chromosome 4 open reading frame 19##AK001879|C4orf19|55286|chromosome 4 open reading frame 19##NM_018302|C4orf19|55286|chromosome 4 open reading frame 19##AK225192|C4orf19|55286|chromosome 4 open reading frame 19	0.0	
chr4	40257588	40257676	reg1040427.p1	3.408	+	NM_004310 TSC_hg19_v1_chr4_+_40198653 Z35227 BC014261 AK313744	-58991	+	TSC_hg19_v1_chr4_+_40058519 AK001542 NM_018177 AB371584	-199100	+	TSC_hg19_v1_chr4_-_39979555 BC041361 NM_001100399 NM_001100400 AB621803	-278039	-	BC113549 BC113575 AJ243342 NM_017581 AB463495 HQ258272 AF227732	79813	+	TSC_hg19_v1_chr4_-_40516579 BX648404 AF262323	258952	-	TSC_hg19_v1_chr4_-_40518003 AK000280 NM_019027	260326	-	NM_004310|RHOH|399|ras homolog gene family, member H##Z35227|RHOH|399|ras homolog gene family, member H##BC014261|RHOH|399|ras homolog gene family, member H##AK313744|RHOH|399|ras homolog gene family, member H##AK001542|N4BP2|55728|NEDD4 binding protein 2##NM_018177|N4BP2|55728|NEDD4 binding protein 2##AB371584|N4BP2|55728|NEDD4 binding protein 2##BC041361|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100399|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##NM_001100400|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##AB621803|PDS5A|23244|PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)##BC113549|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BC113575|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AJ243342|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##NM_017581|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##HQ258272|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##AF227732|CHRNA9|55584|cholinergic receptor, nicotinic, alpha 9##BX648404|RBM47|54502|RNA binding motif protein 47##AF262323|RBM47|54502|RNA binding motif protein 47##AK000280|RBM47|54502|RNA binding motif protein 47##NM_019027|RBM47|54502|RNA binding motif protein 47	0.0	
chr5	118676397	118676539	reg1041125.p1	3.408	+	AF070671 TSC_hg19_v1_chr5_+_118604523	-71951	+	NM_001077654 TSC_hg19_v1_chr5_+_118604492 AK097884 AK001931	-72010	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	-269303	+	BC007014 NM_014350 BC005352 TSC_hg19_v1_chr5_+_118691687	15150	+	TSC_hg19_v1_chr5_+_118691713 AF099935 AK001850 AF099936 CU675493	15270	+	TSC_hg19_v1_chr5_+_118788215 NM_000414 NM_001199292 AK301212 AK312449 NM_001199291 BC003098 AK293254 AB208932 X87176 AK299685 AK298075 CU678374 DQ891866 DQ895055	111728	+	AF070671|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_001077654|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK097884|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001931|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1##BC007014|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_014350|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##BC005352|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099935|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AK001850|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##AF099936|TNFAIP8|25816|tumor necrosis factor, alpha-induced protein 8##NM_000414|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199292|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK301212|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK312449|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##NM_001199291|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##BC003098|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK293254|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##X87176|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK299685|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##AK298075|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ891866|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4##DQ895055|HSD17B4|3295|hydroxysteroid (17-beta) dehydrogenase 4	0.044963	
chr6	152806912	152807000	reg1032491.p1	3.408	+	AK056122 TSC_hg19_v1_chr6_-_152702456 BC039121	-104482	-	TSC_hg19_v1_chr6_-_152702331 BX537517	-104615	-	TSC_hg19_v1_chr6_-_152623240 AK310977	-183705	-	AF535142 NM_033071 TSC_hg19_v1_chr6_-_152958011	151086	-	AF495910 NM_182961	151577	-	NM_025107 AF527367 AK024922 BC128463 BC128464 GU997693 AK021612 BC022556 AL834500 CU692694	212149	+	AK056122|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##BC039121|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##BX537517|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AK310977|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AF535142|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_033071|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##AF495910|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_182961|SYNE1|23345|spectrin repeat containing, nuclear envelope 1##NM_025107|MYCT1|80177|myc target 1##AF527367|MYCT1|80177|myc target 1##AK024922|MYCT1|80177|myc target 1##BC128463|MYCT1|80177|myc target 1##BC128464|MYCT1|80177|myc target 1##GU997693|MYCT1|80177|myc target 1##AK021612|MYCT1|80177|myc target 1##BC022556|MYCT1|80177|myc target 1##AL834500|MYCT1|80177|myc target 1	0.011757	
chr7	44925325	44925437	reg1041556.p1	3.408	+	AB464680 TSC_hg19_v1_chr7_-_44924953 AY039216 NM_033224 BC101735 BC101737	-412	-	TSC_hg19_v1_chr7_-_44887698 NM_012412 NM_138635 NM_201436 NM_201516 NM_201517	-37655	-	TSC_hg19_v1_chr7_-_44887667 AK023973	-37712	-	AB463131 TSC_hg19_v1_chr7_-_45018615 AK074050	93206	-	BC113544 BC117241 TSC_hg19_v1_chr7_-_45018675 AB290179 AL832302	93281	-	BC063854 TSC_hg19_v1_chr7_-_45018705 AK097912 NM_033054	93316	-	AY039216|PURB|5814|purine-rich element binding protein B##NM_033224|PURB|5814|purine-rich element binding protein B##BC101735|PURB|5814|purine-rich element binding protein B##BC101737|PURB|5814|purine-rich element binding protein B##NM_012412|H2AFV|94239|H2A histone family, member V##NM_138635|H2AFV|94239|H2A histone family, member V##NM_201436|H2AFV|94239|H2A histone family, member V##NM_201516|H2AFV|94239|H2A histone family, member V##NM_201517|H2AFV|94239|H2A histone family, member V##AK023973|H2AFV|94239|H2A histone family, member V##AK074050|MYO1G|64005|myosin IG##BC113544|MYO1G|64005|myosin IG##BC117241|MYO1G|64005|myosin IG##AB290179|MYO1G|64005|myosin IG##AL832302|MYO1G|64005|myosin IG##BC063854|MYO1G|64005|myosin IG##AK097912|MYO1G|64005|myosin IG##NM_033054|MYO1G|64005|myosin IG	0.0	
chr7	94284475	94284629	reg1040560.p1	3.408	+	AK123866 TSC_hg19_v1_chr7_+_94139376 AK314329 BC050313 AF355594	-145173	+	TSC_hg19_v1_chr7_+_94139172 BC029543 NM_022900 BC063284 AF397424	-145430	+	TSC_hg19_v1_chr7_+_94024206 AK297786 AK223175 AK300194 Z74616 AK226074 BC042586 BC054498 Y00724 CU691094 AB384984	-260281	+	AB117974 TSC_hg19_v1_chr7_-_94285409 AF516515 CU692388 DQ894063 EU176189	841	-	AY359042 TSC_hg19_v1_chr7_-_94285446 AF036364 BC021709 AK313438	896	-	AJ000534 AK295021 AK298220 TSC_hg19_v1_chr7_-_94285479 NM_001099400 NM_001099401 NM_003919	947	-	AK123866|CASD1|64921|CAS1 domain containing 1##AK314329|CASD1|64921|CAS1 domain containing 1##BC050313|CASD1|64921|CAS1 domain containing 1##AF355594|CASD1|64921|CAS1 domain containing 1##BC029543|CASD1|64921|CAS1 domain containing 1##NM_022900|CASD1|64921|CAS1 domain containing 1##BC063284|CASD1|64921|CAS1 domain containing 1##AF397424|CASD1|64921|CAS1 domain containing 1##AK297786|COL1A2|1278|collagen, type I, alpha 2##AK223175|COL1A2|1278|collagen, type I, alpha 2##AK300194|COL1A2|1278|collagen, type I, alpha 2##Z74616|COL1A2|1278|collagen, type I, alpha 2##AK226074|COL1A2|1278|collagen, type I, alpha 2##BC042586|COL1A2|1278|collagen, type I, alpha 2##BC054498|COL1A2|1278|collagen, type I, alpha 2##Y00724|COL1A2|1278|collagen, type I, alpha 2##AB117974|SGCE|8910|sarcoglycan, epsilon##AF516515|SGCE|8910|sarcoglycan, epsilon##DQ894063|SGCE|8910|sarcoglycan, epsilon##EU176189|SGCE|8910|sarcoglycan, epsilon##AY359042|SGCE|8910|sarcoglycan, epsilon##AF036364|SGCE|8910|sarcoglycan, epsilon##BC021709|SGCE|8910|sarcoglycan, epsilon##AK313438|SGCE|8910|sarcoglycan, epsilon##AJ000534|SGCE|8910|sarcoglycan, epsilon##AK295021|SGCE|8910|sarcoglycan, epsilon##AK298220|SGCE|8910|sarcoglycan, epsilon##NM_001099400|SGCE|8910|sarcoglycan, epsilon##NM_001099401|SGCE|8910|sarcoglycan, epsilon##NM_003919|SGCE|8910|sarcoglycan, epsilon	0.0	
chr8	102216743	102216924	reg1025846.p1	3.408	+	TSC_hg19_v1_chr8_-_101965608 NM_003406	-251210	-	TSC_hg19_v1_chr8_-_101965595 M86400	-251257	-	TSC_hg19_v1_chr8_-_101965198 NM_001135699	-251607	-	BC035233 TSC_hg19_v1_chr8_-_102217845 BC015925 AF125099 AF275802 AF275809 AK290477 BC068524	860	-	TSC_hg19_v1_chr8_-_102217877 NM_001042511	1043	-	TSC_hg19_v1_chr8_-_102217929 NM_001042510 NM_016096	1121	-	NM_003406|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##M86400|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##NM_001135699|YWHAZ|7534|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide##BC035233|ZNF706|51123|zinc finger protein 706##BC015925|ZNF706|51123|zinc finger protein 706##AF125099|ZNF706|51123|zinc finger protein 706##AF275802|ZNF706|51123|zinc finger protein 706##AF275809|ZNF706|51123|zinc finger protein 706##AK290477|ZNF706|51123|zinc finger protein 706##BC068524|ZNF706|51123|zinc finger protein 706##NM_001042511|ZNF706|51123|zinc finger protein 706##NM_001042510|ZNF706|51123|zinc finger protein 706##NM_016096|ZNF706|51123|zinc finger protein 706	0.0	
chrX	57848419	57848528	reg1009355.p2	3.408	+	TSC_hg19_v1_chrX_+_57618452 AK289766 AB384714	-230013	+	NM_007157	-230205	+	NM_174912 AK055766 BC073922 TSC_hg19_v1_chrX_+_57313185 CU687272 EU285560 BC048279	-535258	+	EU446736 TSC_hg19_v1_chrX_-_57936884 BC059356 AK292686 AK122815 NM_007156	88486	-	BC112360 TSC_hg19_v1_chrX_-_62571212 AK126931 AL833314 NM_001012968	4722726	-	TSC_hg19_v1_chrX_-_62648209 BC048208 AK129670	4799794	-	AK289766|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_007157|ZXDB|158586|zinc finger, X-linked, duplicated B##NM_174912|FAAH2|158584|fatty acid amide hydrolase 2##AK055766|FAAH2|158584|fatty acid amide hydrolase 2##BC073922|FAAH2|158584|fatty acid amide hydrolase 2##EU285560|FAAH2|158584|fatty acid amide hydrolase 2##BC048279|FAAH2|158584|fatty acid amide hydrolase 2##EU446736|ZXDA|7789|zinc finger, X-linked, duplicated A##BC059356|ZXDA|7789|zinc finger, X-linked, duplicated A##AK292686|ZXDA|7789|zinc finger, X-linked, duplicated A##AK122815|ZXDA|7789|zinc finger, X-linked, duplicated A##NM_007156|ZXDA|7789|zinc finger, X-linked, duplicated A##BC112360|SPIN4|139886|spindlin family, member 4##AK126931|SPIN4|139886|spindlin family, member 4##AL833314|SPIN4|139886|spindlin family, member 4##NM_001012968|SPIN4|139886|spindlin family, member 4##BC048208|LOC92249|92249|uncharacterized LOC92249##AK129670|LOC92249|92249|uncharacterized LOC92249	0.0	
chr10	80828939	80829090	reg1031333.p2	3.407	+	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	-226	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-1035383	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-1035458	+	TSC_hg19_v1_chr10_+_80899458 AK025812	70470	+	TSC_hg19_v1_chr10_+_81003207 AB033050	174116	+	AK299728 TSC_hg19_v1_chr10_+_81065901	236874	+	BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK299728|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.0	
chr1	161178933	161179114	reg1002595.p1	3.407	+	BC001456 TSC_hg19_v1_chr1_+_161172183 DQ894087	-6844	+	AK314807 TSC_hg19_v1_chr1_+_161172170 BC000170 AF013160 AF050640 AK222618 AK309871	-6855	+	TSC_hg19_v1_chr1_+_161172161 AK301641 AK315977	-6880	+	AK307102 TSC_hg19_v1_chr1_+_161185076	6048	+	TSC_hg19_v1_chr1_+_161185087 M33195 NM_004106 BC033872 AB590329 DQ890782 EU176502	6074	+	BT006786 AB590164 DQ892493 DQ895705 AB106565 M29882 X00955 TSC_hg19_v1_chr1_-_161193333	14240	-	BC001456|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##DQ894087|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AK314807|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##BC000170|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AF013160|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AF050640|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AK222618|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AK309871|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AK301641|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AK315977|NDUFS2|4720|NADH dehydrogenase (ubiquinone) Fe-S protein 2, 49kDa (NADH-coenzyme Q reductase)##AK307102|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##M33195|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##NM_004106|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##BC033872|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##DQ890782|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##EU176502|FCER1G|2207|Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide##BT006786|APOA2|336|apolipoprotein A-II##DQ892493|APOA2|336|apolipoprotein A-II##DQ895705|APOA2|336|apolipoprotein A-II##AB106565|APOA2|336|apolipoprotein A-II##M29882|APOA2|336|apolipoprotein A-II##X00955|APOA2|336|apolipoprotein A-II	0.0	
chr1	19229371	19229488	reg1033539.p2	3.407	+	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-275	-	AK294552 NM_001161504	-12045	-	NM_152232 AB527225	-43274	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	53370	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	307317	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	348563	-	DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##NM_001136265|IFFO2|126917|intermediate filament family orphan 2##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090	0.0	
chr16	20885908	20886088	reg1036910.p1	3.407	+	TSC_hg19_v1_chr16_+_20818060 AK314458 BC068503	-67954	+	NM_001144924 NM_001199053 NM_030941 TSC_hg19_v1_chr16_+_20817848 BC007646 AF332193 AL136763	-68182	+	AK292594 TSC_hg19_v1_chr16_-_20817795 AK304347 BC010503 NM_001142725 NM_080663 AK127391	-68213	-	AK308690 NM_020424	25558	+	BX648998 NM_173475 TSC_hg19_v1_chr16_-_20911681 BC040442 BX648185	25652	-	AK311415 NM_001128301 NM_001128302 TSC_hg19_v1_chr16_+_20912121 AK311881	26123	+	AK314458|LOC81691|81691|exonuclease NEF-sp##BC068503|LOC81691|81691|exonuclease NEF-sp##NM_001144924|LOC81691|81691|exonuclease NEF-sp##NM_001199053|LOC81691|81691|exonuclease NEF-sp##NM_030941|LOC81691|81691|exonuclease NEF-sp##BC007646|LOC81691|81691|exonuclease NEF-sp##AF332193|LOC81691|81691|exonuclease NEF-sp##AL136763|LOC81691|81691|exonuclease NEF-sp##AK292594|ERI2|112479|ERI1 exoribonuclease family member 2##AK304347|ERI2|112479|ERI1 exoribonuclease family member 2##BC010503|ERI2|112479|ERI1 exoribonuclease family member 2##NM_001142725|ERI2|112479|ERI1 exoribonuclease family member 2##NM_080663|ERI2|112479|ERI1 exoribonuclease family member 2##AK127391|ERI2|112479|ERI1 exoribonuclease family member 2##AK308690|LYRM1|57149|LYR motif containing 1##NM_020424|LYRM1|57149|LYR motif containing 1##BX648998|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##NM_173475|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##BC040442|DCUN1D3|123879|DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)##AK311415|LYRM1|57149|LYR motif containing 1##NM_001128301|LYRM1|57149|LYR motif containing 1##NM_001128302|LYRM1|57149|LYR motif containing 1##AK311881|LYRM1|57149|LYR motif containing 1	0.0	
chr16	29674123	29674303	reg1043246.p1	3.407	+	AB040413 AB055226 TSC_hg19_v1_chr16_-_29625045	-49171	-	TSC_hg19_v1_chr16_-_29606667 AK316536	-67540	-	CU687812 AK304513 TSC_hg19_v1_chr16_-_29606405	-67868	-	TSC_hg19_v1_chr16_+_29674283 NM_001030288 X60502 BC012350	119	+	TSC_hg19_v1_chr16_+_29674567 AK292626 AK313750	352	+	TSC_hg19_v1_chr16_+_29674568 J04168 J04536 NM_003123	360	+	AK304513|LOC440354|440354|smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene##NM_001030288|SPN|6693|sialophorin##X60502|SPN|6693|sialophorin##BC012350|SPN|6693|sialophorin##AK292626|SPN|6693|sialophorin##AK313750|SPN|6693|sialophorin##J04536|SPN|6693|sialophorin##NM_003123|SPN|6693|sialophorin	0.0	
chr17	30916145	30916231	reg1040081.p1	3.407	+	TSC_hg19_v1_chr17_+_30814712 AK307275	-101428	+	X80343 BC026347 AB385577 CU676568 CU689012 BT019573 TSC_hg19_v1_chr17_+_30814643	-101591	+	TSC_hg19_v1_chr17_+_30813936 BC030792 NM_003885 BC020580	-102117	+	CU688936 AB385376 AB018270 BC146763 NM_015194	287707	-	TSC_hg19_v1_chr17_-_31204141 AK127942	287935	-	TSC_hg19_v1_chr17_-_31204196 BC030602	288025	-	X80343|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC026347|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BT019573|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC030792|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##NM_003885|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##BC020580|CDK5R1|8851|cyclin-dependent kinase 5, regulatory subunit 1 (p35)##AB018270|MYO1D|4642|myosin ID##BC146763|MYO1D|4642|myosin ID##NM_015194|MYO1D|4642|myosin ID##AK127942|MYO1D|4642|myosin ID##BC030602|MYO1D|4642|myosin ID	0.663205	CTCF.p2:10:0.663
chr19	926831	926922	reg1036940.p2	3.407	+	TSC_hg19_v1_chr19_+_926038 AY845638 BC060828 NM_005224	-865	+	TSC_hg19_v1_chr19_+_917306 BC141812 NM_032551 AY253982 BC140825 AB051065 AF343725 AJ309020 AY029541 AY253981 BC111094 EU883577	-9483	+	NM_138774 TSC_hg19_v1_chr19_-_913224	-13652	-	TSC_hg19_v1_chr19_+_984344 NM_024100 BC000040 BC001648 CU674808	57458	+	TSC_hg19_v1_chr19_+_1000312 AY507106 AY507107 NM_138690	73489	+	DQ893224 DQ896554 CU679197 TSC_hg19_v1_chr19_-_1021121 BC008957 DQ005958	94182	-	AY845638|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC060828|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##NM_005224|ARID3A|1820|AT rich interactive domain 3A (BRIGHT-like)##BC141812|KISS1R|84634|KISS1 receptor##NM_032551|KISS1R|84634|KISS1 receptor##AY253982|KISS1R|84634|KISS1 receptor##BC140825|KISS1R|84634|KISS1 receptor##AB051065|KISS1R|84634|KISS1 receptor##AF343725|KISS1R|84634|KISS1 receptor##AJ309020|KISS1R|84634|KISS1 receptor##AY029541|KISS1R|84634|KISS1 receptor##AY253981|KISS1R|84634|KISS1 receptor##EU883577|KISS1R|84634|KISS1 receptor##NM_138774|R3HDM4|91300|R3H domain containing 4##NM_024100|WDR18|57418|WD repeat domain 18##BC000040|WDR18|57418|WD repeat domain 18##BC001648|WDR18|57418|WD repeat domain 18##AY507106|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##AY507107|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##NM_138690|GRIN3B|116444|glutamate receptor, ionotropic, N-methyl-D-aspartate 3B##DQ893224|C19orf6|91304|chromosome 19 open reading frame 6##DQ896554|C19orf6|91304|chromosome 19 open reading frame 6##BC008957|C19orf6|91304|chromosome 19 open reading frame 6##DQ005958|C19orf6|91304|chromosome 19 open reading frame 6	0.0	
chr20	47494298	47494399	reg1040937.p2	3.407	+	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	-49909	-	AB037836 TSC_hg19_v1_chr20_-_47444291	-50062	-	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-1079030	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	43970	+	TSC_hg19_v1_chr20_+_47662853 BC108309 NM_001316 AF053641 U33286 AK312306 AK307965 AK297270 AK297314 AK298477 AK300589 BC109313 BC109314	168478	+	TSC_hg19_v1_chr20_+_47662875 AF053640	168540	+	AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC108309|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##NM_001316|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053641|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##U33286|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK312306|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK307965|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297270|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK297314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK298477|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AK300589|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109313|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##BC109314|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)##AF053640|CSE1L|1434|CSE1 chromosome segregation 1-like (yeast)	0.0	
chr2	123602018	123602148	reg1043056.p2	3.407	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-1088846	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-1107618	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-1194438	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	1180781	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	3811624	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	3811709	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.0	
chr3	16550322	16550432	reg1028553.p2	3.407	+	NM_138381 TSC_hg19_v1_chr3_+_16306718 DQ364598 AK307258 BC008322	-243669	+	AK311618 BC010181 AK092040 TSC_hg19_v1_chr3_-_16306451 AK022970 NM_001047434 NM_206831	-243988	-	AL831925 AK225673 AK312425 NM_054110 AY358443 AL832736 BC014789	-334183	+	TSC_hg19_v1_chr3_-_16555030 BC051336 BC069209 AK074446 BC098270 BC100667 BC100669 BC121795	4641	-	TSC_hg19_v1_chr3_-_16555204 D42043 AY237654 NM_015150	4847	-	BX648638 AK303026 NM_001190811	95893	-	NM_138381|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##DQ364598|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK307258|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##BC008322|OXNAD1|92106|oxidoreductase NAD-binding domain containing 1##AK311618|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##BC010181|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK092040|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AK022970|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_001047434|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##NM_206831|DPH3|285381|DPH3, KTI11 homolog (S. cerevisiae)##AL831925|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AK312425|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##NM_054110|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AY358443|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##AL832736|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC014789|GALNTL2|117248|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 2##BC051336|RFTN1|23180|raftlin, lipid raft linker 1##BC069209|RFTN1|23180|raftlin, lipid raft linker 1##AK074446|RFTN1|23180|raftlin, lipid raft linker 1##BC098270|RFTN1|23180|raftlin, lipid raft linker 1##BC100667|RFTN1|23180|raftlin, lipid raft linker 1##BC100669|RFTN1|23180|raftlin, lipid raft linker 1##BC121795|RFTN1|23180|raftlin, lipid raft linker 1##D42043|RFTN1|23180|raftlin, lipid raft linker 1##AY237654|RFTN1|23180|raftlin, lipid raft linker 1##NM_015150|RFTN1|23180|raftlin, lipid raft linker 1##BX648638|DAZL|1618|deleted in azoospermia-like##AK303026|DAZL|1618|deleted in azoospermia-like##NM_001190811|DAZL|1618|deleted in azoospermia-like	0.0	
chr3	61158538	61158678	reg1037356.p2	3.407	+	BC050317 TSC_hg19_v1_chr3_-_59035759	-2122848	-	BC075863 TSC_hg19_v1_chr3_-_59035746	-2122867	-	TSC_hg19_v1_chr3_-_59035711 AK124111 NM_198463 BC140002	-2122900	-	TSC_hg19_v1_chr3_-_61237083 BC057223 BC032336 U46922 AK289824 NM_001166243 NM_002012	78482	-	TSC_hg19_v1_chr3_+_61547242 BC036018 BC048961 NM_002841	388603	+	BC047734 TSC_hg19_v1_chr3_+_61547294	388678	+	BC050317|C3orf67|200844|chromosome 3 open reading frame 67##BC075863|C3orf67|200844|chromosome 3 open reading frame 67##AK124111|C3orf67|200844|chromosome 3 open reading frame 67##NM_198463|C3orf67|200844|chromosome 3 open reading frame 67##BC140002|C3orf67|200844|chromosome 3 open reading frame 67##BC057223|FHIT|2272|fragile histidine triad gene##BC032336|FHIT|2272|fragile histidine triad gene##U46922|FHIT|2272|fragile histidine triad gene##AK289824|FHIT|2272|fragile histidine triad gene##NM_001166243|FHIT|2272|fragile histidine triad gene##NM_002012|FHIT|2272|fragile histidine triad gene##BC036018|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC048961|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##NM_002841|PTPRG|5793|protein tyrosine phosphatase, receptor type, G##BC047734|PTPRG|5793|protein tyrosine phosphatase, receptor type, G	0.849866	CTCF.p2:-22:0.850
chr8	22550010	22550109	reg1046690.p1	3.407	+	AK295134 NM_001199880	-158	-	TSC_hg19_v1_chr8_-_22526609 BC009824 AK023980 AF271732 AK001289 AK222470 NM_018688	-23439	-	TSC_hg19_v1_chr8_+_22462537 NM_021174 AL834162 AL834351 AL834352	-87518	+	AK294968 AK295834 NM_001199881	15	-	AB529193 HQ258229 TSC_hg19_v1_chr8_-_22550508 BC112279 BC104765	446	-	AK292464 AK313604 X63741 NM_004430 S40832 TSC_hg19_v1_chr8_-_22550853	725	-	AK295134|EGR3|1960|early growth response 3##NM_001199880|EGR3|1960|early growth response 3##BC009824|BIN3|55909|bridging integrator 3##AK023980|BIN3|55909|bridging integrator 3##AF271732|BIN3|55909|bridging integrator 3##AK001289|BIN3|55909|bridging integrator 3##AK222470|BIN3|55909|bridging integrator 3##NM_018688|BIN3|55909|bridging integrator 3##NM_021174|KIAA1967|57805|KIAA1967##AL834162|KIAA1967|57805|KIAA1967##AL834351|KIAA1967|57805|KIAA1967##AL834352|KIAA1967|57805|KIAA1967##AK294968|EGR3|1960|early growth response 3##NM_001199881|EGR3|1960|early growth response 3##HQ258229|EGR3|1960|early growth response 3##BC112279|EGR3|1960|early growth response 3##BC104765|EGR3|1960|early growth response 3##AK292464|EGR3|1960|early growth response 3##AK313604|EGR3|1960|early growth response 3##X63741|EGR3|1960|early growth response 3##NM_004430|EGR3|1960|early growth response 3##S40832|EGR3|1960|early growth response 3	0.025407	
chr8	72739418	72739520	reg1001350.p1	3.407	+	BC035138 BC048982 TSC_hg19_v1_chr8_-_72459928	-279560	-	AJ000098 NM_000503 TSC_hg19_v1_chr8_-_72274481	-464994	-	TSC_hg19_v1_chr8_-_72274302 AK307379	-465176	-	TSC_hg19_v1_chr8_+_72756330 AK123315 BC094782	16805	+	TSC_hg19_v1_chr8_+_72756336 BX647470	16871	+	TSC_hg19_v1_chr8_-_72756449 AF087036 AB463900 BT007169	16970	-	AJ000098|EYA1|2138|eyes absent homolog 1 (Drosophila)##NM_000503|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK307379|EYA1|2138|eyes absent homolog 1 (Drosophila)##AK123315|LOC100132891|100132891|uncharacterized LOC100132891##AF087036|MSC|9242|musculin##BT007169|MSC|9242|musculin	0.0	
chr11	108464284	108464351	reg1039418.p1	3.406	+	TSC_hg19_v1_chr11_-_108369112 AK313534 AF533708 BC036526 NM_153705	-95122	-	BC059411 BC029536 AK303096 NM_152587	-126075	-	TSC_hg19_v1_chr11_+_108093793 AB209133 U33841	-370520	+	BC113119 BC117701 TSC_hg19_v1_chr11_-_108464372 AY099469 NM_015065 AB014524	87	-	TSC_hg19_v1_chr11_+_108535795 AK296752 BC091521 AB040537 NM_004398 U28042 AK315216 BC093654 BC093656 AB209884 BC064921 BC049217	71497	+	TSC_hg19_v1_chr11_+_109292850 AK303693 NM_207645	828526	+	AK313534|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##AF533708|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC036526|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##NM_153705|KDELC2|143888|KDEL (Lys-Asp-Glu-Leu) containing 2##BC029536|C11orf65|160140|chromosome 11 open reading frame 65##AK303096|C11orf65|160140|chromosome 11 open reading frame 65##NM_152587|C11orf65|160140|chromosome 11 open reading frame 65##AB209133|ATM|472|ataxia telangiectasia mutated##U33841|ATM|472|ataxia telangiectasia mutated##BC113119|EXPH5|23086|exophilin 5##BC117701|EXPH5|23086|exophilin 5##AY099469|EXPH5|23086|exophilin 5##NM_015065|EXPH5|23086|exophilin 5##AB014524|EXPH5|23086|exophilin 5##AK296752|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC091521|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB040537|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##NM_004398|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##U28042|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK315216|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093654|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC093656|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AB209884|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC064921|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##BC049217|DDX10|1662|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10##AK303693|C11orf87|399947|chromosome 11 open reading frame 87##NM_207645|C11orf87|399947|chromosome 11 open reading frame 87	0.0	
chr1	160737728	160737909	reg1004531.p1	3.406	+	AK298548 AK298499 AY358512 AL834424 AK301438 TSC_hg19_v1_chr1_+_160709067 AK290706 AK292097 AK292148 AK301137 AK301432 AF390894 AB027233 NM_021181 AF291815 AJ271869 AJ276429 BC027867 AB590100 AM392941 AM393275 EU832487 EU832567	-28754	+	BT019813 CR457012 AB590257 CU688852 DQ896316 EU176422 M59904 M37766 BC016182 NM_001778 X06341 BC030224 AK225636 AK310624 AK310744	-56232	-	AK314244 NM_003037 BC012602	-120755	-	NM_001033667 NM_002348 BC121049 AF244129 AK292048 AK303403 BC042905 BC064485 BC027920 L42621	28180	+	AB528046 AF145782 CU691064 BC053985 AJ245375 AJ245376 AJ245377 BC041607 AF105261 AF242540 AF107761 AK313201 AF117711 AK295950 BC028073 NM_001166663 NM_001166664 NM_016382	94760	-	AY619691 AB036706 AF271386 AK000029 AY619692 AK222533 AY358359 AY157362 AY065972 AY157361 BC020664 NM_017625 AY549722	117140	-	AK298548|SLAMF7|57823|SLAM family member 7##AK298499|SLAMF7|57823|SLAM family member 7##AY358512|SLAMF7|57823|SLAM family member 7##AL834424|SLAMF7|57823|SLAM family member 7##AK301438|SLAMF7|57823|SLAM family member 7##AK290706|SLAMF7|57823|SLAM family member 7##AK292097|SLAMF7|57823|SLAM family member 7##AK292148|SLAMF7|57823|SLAM family member 7##AK301137|SLAMF7|57823|SLAM family member 7##AK301432|SLAMF7|57823|SLAM family member 7##AF390894|SLAMF7|57823|SLAM family member 7##AB027233|SLAMF7|57823|SLAM family member 7##NM_021181|SLAMF7|57823|SLAM family member 7##AF291815|SLAMF7|57823|SLAM family member 7##AJ271869|SLAMF7|57823|SLAM family member 7##AJ276429|SLAMF7|57823|SLAM family member 7##BC027867|SLAMF7|57823|SLAM family member 7##AM392941|SLAMF7|57823|SLAM family member 7##AM393275|SLAMF7|57823|SLAM family member 7##EU832487|SLAMF7|57823|SLAM family member 7##EU832567|SLAMF7|57823|SLAM family member 7##BT019813|CD48|962|CD48 molecule##CR457012|CD48|962|CD48 molecule##DQ896316|CD48|962|CD48 molecule##EU176422|CD48|962|CD48 molecule##M59904|CD48|962|CD48 molecule##M37766|CD48|962|CD48 molecule##BC016182|CD48|962|CD48 molecule##NM_001778|CD48|962|CD48 molecule##X06341|CD48|962|CD48 molecule##BC030224|CD48|962|CD48 molecule##AK225636|CD48|962|CD48 molecule##AK310624|CD48|962|CD48 molecule##AK310744|CD48|962|CD48 molecule##AK314244|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_003037|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##BC012602|SLAMF1|6504|signaling lymphocytic activation molecule family member 1##NM_001033667|LY9|4063|lymphocyte antigen 9##NM_002348|LY9|4063|lymphocyte antigen 9##BC121049|LY9|4063|lymphocyte antigen 9##AF244129|LY9|4063|lymphocyte antigen 9##AK292048|LY9|4063|lymphocyte antigen 9##AK303403|LY9|4063|lymphocyte antigen 9##BC042905|LY9|4063|lymphocyte antigen 9##BC064485|LY9|4063|lymphocyte antigen 9##BC027920|LY9|4063|lymphocyte antigen 9##L42621|LY9|4063|lymphocyte antigen 9##AF145782|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC053985|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245375|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245376|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AJ245377|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC041607|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF105261|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF242540|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF107761|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK313201|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AF117711|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AK295950|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##BC028073|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166663|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_001166664|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##NM_016382|CD244|51744|CD244 molecule, natural killer cell receptor 2B4##AY619691|ITLN1|55600|intelectin 1 (galactofuranose binding)##AB036706|ITLN1|55600|intelectin 1 (galactofuranose binding)##AF271386|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK000029|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY619692|ITLN1|55600|intelectin 1 (galactofuranose binding)##AK222533|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY358359|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157362|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY065972|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY157361|ITLN1|55600|intelectin 1 (galactofuranose binding)##BC020664|ITLN1|55600|intelectin 1 (galactofuranose binding)##NM_017625|ITLN1|55600|intelectin 1 (galactofuranose binding)##AY549722|ITLN1|55600|intelectin 1 (galactofuranose binding)	0.0	
chr1	30558946	30559039	reg1038287.p1	3.406	+	TSC_hg19_v1_chr1_+_29563016 NM_001195001 NM_005704 NM_133177 NM_133178 X97198 U73727 BC146655 X95712 U71075	-995944	+	TSC_hg19_v1_chr1_-_29557437 AK300889 AK025830 AK095099 AK225687 BC001419 AF151821 NM_001024732 NM_016011 AK315274	-1001545	-	TSC_hg19_v1_chr1_-_29557417 AK226084 CR456703 AB528613	-1001612	-	TSC_hg19_v1_chr1_+_31191648 AK057725	632639	+	TSC_hg19_v1_chr1_-_31196436 AK312949 NM_002379 AK075519	637440	-	AB383742 TSC_hg19_v1_chr1_-_31230622 D42042 U30498 AK297014 AK307303 AK292009 BC106896 BC106897 U51240	671640	-	NM_001195001|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_005704|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133177|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##NM_133178|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X97198|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U73727|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##BC146655|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##X95712|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##U71075|PTPRU|10076|protein tyrosine phosphatase, receptor type, U##AK300889|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK025830|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK095099|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK225687|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##BC001419|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AF151821|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_001024732|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##NM_016011|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK315274|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK226084|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##CR456703|MECR|51102|mitochondrial trans-2-enoyl-CoA reductase##AK057725|LOC100129196|100129196|uncharacterized LOC100129196##AK312949|MATN1|4146|matrilin 1, cartilage matrix protein##NM_002379|MATN1|4146|matrilin 1, cartilage matrix protein##AK075519|MATN1|4146|matrilin 1, cartilage matrix protein##D42042|LAPTM5|7805|lysosomal protein transmembrane 5##U30498|LAPTM5|7805|lysosomal protein transmembrane 5##AK297014|LAPTM5|7805|lysosomal protein transmembrane 5##AK292009|LAPTM5|7805|lysosomal protein transmembrane 5##BC106896|LAPTM5|7805|lysosomal protein transmembrane 5##BC106897|LAPTM5|7805|lysosomal protein transmembrane 5##U51240|LAPTM5|7805|lysosomal protein transmembrane 5	1.103657	CTCF.p2:-18:0.989
chr13	29149543	29149644	reg1035314.p1	3.406	+	BC039007 U01134 X51602 BC029849 BC046165 BC048278 TSC_hg19_v1_chr13_-_29069266 AK292936 AK300392 AK309901 EU360600 NM_001159920 NM_001160030 NM_001160031 NM_002019	-80349	-	TSC_hg19_v1_chr13_+_28712658 AK296435 NM_175854	-436927	+	Z26652 BC126350 BC144039 BC144040 U02687 TSC_hg19_v1_chr13_-_28674704 BC036028 NM_004119	-474906	-	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	83615	+	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	83701	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	143462	-	BC039007|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##U01134|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##BC029849|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK292936|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK300392|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK309901|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##EU360600|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001159920|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160030|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_001160031|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##NM_002019|FLT1|2321|fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)##AK296435|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##NM_175854|PAN3|255967|PAN3 poly(A) specific ribonuclease subunit homolog (S. cerevisiae)##Z26652|FLT3|2322|fms-related tyrosine kinase 3##BC126350|FLT3|2322|fms-related tyrosine kinase 3##BC144039|FLT3|2322|fms-related tyrosine kinase 3##BC144040|FLT3|2322|fms-related tyrosine kinase 3##U02687|FLT3|2322|fms-related tyrosine kinase 3##BC036028|FLT3|2322|fms-related tyrosine kinase 3##NM_004119|FLT3|2322|fms-related tyrosine kinase 3##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3	0.553354	CTCF.p2:-7:0.553
chr14	25423424	25423605	reg1033747.p1	3.406	+	AB590431 AY232655 AY232656 EU176524 M17016 AY232654 J04071 BC030195 J03189 NM_004131 AY372494	-320096	-	AB590301 CU693356 DQ892068 DQ895261 M36118 BC027974 NM_033423 AY232658 TSC_hg19_v1_chr14_-_25078880 AY232657	-344653	-	AB590242 CR456807 CR541704 DQ893067 DQ896320 M16117 TSC_hg19_v1_chr14_-_25045457 AK225914 BC014460 NM_001911	-378068	-	TSC_hg19_v1_chr14_-_25519354 BC067278 NM_014178 AK096957 AL834346 BC009499	95724	-	NM_002515 NM_006489 NM_006491 TSC_hg19_v1_chr14_-_27067013	1643474	-	TSC_hg19_v1_chr14_+_29236171 X74142 X74143 NM_005249	3812714	+	AY232655|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232656|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##EU176524|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##M17016|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY232654|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J04071|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##BC030195|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##J03189|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##NM_004131|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##AY372494|GZMB|3002|granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)##DQ892068|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##DQ895261|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##M36118|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##BC027974|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##NM_033423|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232658|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##AY232657|GZMH|2999|granzyme H (cathepsin G-like 2, protein h-CCPX)##CR456807|CTSG|1511|cathepsin G##CR541704|CTSG|1511|cathepsin G##DQ893067|CTSG|1511|cathepsin G##DQ896320|CTSG|1511|cathepsin G##M16117|CTSG|1511|cathepsin G##AK225914|CTSG|1511|cathepsin G##BC014460|CTSG|1511|cathepsin G##NM_001911|CTSG|1511|cathepsin G##BC067278|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_014178|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AK096957|STXBP6|29091|syntaxin binding protein 6 (amisyn)##AL834346|STXBP6|29091|syntaxin binding protein 6 (amisyn)##BC009499|STXBP6|29091|syntaxin binding protein 6 (amisyn)##NM_002515|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006489|NOVA1|4857|neuro-oncological ventral antigen 1##NM_006491|NOVA1|4857|neuro-oncological ventral antigen 1##X74142|FOXG1|2290|forkhead box G1##X74143|FOXG1|2290|forkhead box G1##NM_005249|FOXG1|2290|forkhead box G1	0.0	
chr16	75589789	75589855	reg1033448.p1	3.406	+	AF246718 NM_024533	-20755	-	TSC_hg19_v1_chr16_-_75529303 AK311527 AK093904	-60525	-	TSC_hg19_v1_chr16_-_75529279 AF219990	-60543	-	CU679755 TSC_hg19_v1_chr16_-_75590137 AK096650 NM_001077416 BC010609 AK307263 AK025820 BC063677 AY358612 AK290483 NM_001077418 NM_001077419	344	-	AB030710 NM_007285 TSC_hg19_v1_chr16_+_75600274 BC029601	10439	+	AK289788 TSC_hg19_v1_chr16_+_75600276 AF087848 AK311266 AF077046 AJ010569 BC014594 BC005985 AB463663 AM393324 DQ893101 DQ896373 CR542217	10508	+	AF246718|CHST5|23563|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5##NM_024533|CHST5|23563|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5##AK096650|TMEM231|79583|transmembrane protein 231##NM_001077416|TMEM231|79583|transmembrane protein 231##BC010609|TMEM231|79583|transmembrane protein 231##AK307263|TMEM231|79583|transmembrane protein 231##AK025820|TMEM231|79583|transmembrane protein 231##BC063677|TMEM231|79583|transmembrane protein 231##AY358612|TMEM231|79583|transmembrane protein 231##AK290483|TMEM231|79583|transmembrane protein 231##NM_001077418|TMEM231|79583|transmembrane protein 231##NM_001077419|TMEM231|79583|transmembrane protein 231##AB030710|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##NM_007285|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC029601|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AK289788|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AF087848|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AK311266|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AF077046|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AJ010569|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC014594|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##BC005985|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##AM393324|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##DQ893101|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##DQ896373|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2##CR542217|GABARAPL2|11345|GABA(A) receptor-associated protein-like 2	0.030836	
chr19	38539897	38540078	reg1035343.p1	3.406	+	TSC_hg19_v1_chr19_+_38397906 BC150620 BC036863	-142075	+	TSC_hg19_v1_chr19_+_38397847 NM_015073	-142130	+	AK302913 AY026504 AK128826 NM_031951	-142713	-	AB463560 GQ358728 BC125152 BC125153 U43843 AK308563 NM_001135155 NM_004647	174848	-	BC021191 TSC_hg19_v1_chr19_-_38720320 NM_001135156	180329	-	TSC_hg19_v1_chr19_-_38720336 AK297581	180347	-	BC150620|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##BC036863|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##NM_015073|SIPA1L3|23094|signal-induced proliferation-associated 1 like 3##AK302913|WDR87|83889|WD repeat domain 87##AY026504|WDR87|83889|WD repeat domain 87##AK128826|WDR87|83889|WD repeat domain 87##NM_031951|WDR87|83889|WD repeat domain 87##GQ358728|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125152|DPF1|8193|D4, zinc and double PHD fingers family 1##BC125153|DPF1|8193|D4, zinc and double PHD fingers family 1##U43843|DPF1|8193|D4, zinc and double PHD fingers family 1##AK308563|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135155|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_004647|DPF1|8193|D4, zinc and double PHD fingers family 1##BC021191|DPF1|8193|D4, zinc and double PHD fingers family 1##NM_001135156|DPF1|8193|D4, zinc and double PHD fingers family 1##AK297581|DPF1|8193|D4, zinc and double PHD fingers family 1	0.0	
chr20	45088216	45088343	reg1042169.p1	3.406	+	AL831934 TSC_hg19_v1_chr20_-_45087948	-348	-	TSC_hg19_v1_chr20_-_45061554 AK293861	-26651	-	TSC_hg19_v1_chr20_-_45035255 AK299318 AL833406 BX648819 NM_133171 NM_182764	-52980	-	AK001331 AK095611 BC024177 NM_018102 NM_199441 BC026321 TSC_hg19_v1_chr20_-_45142199	53916	-	NM_080721 TSC_hg19_v1_chr20_-_45179294	90974	-	DQ892655 DQ895894 AF154121 AY072810 AK293902 AK056713 AK295748 AK315131 BC035966 NM_001193339 NM_001193342 NM_022829 TSC_hg19_v1_chr20_-_45280099	191802	-	AL831934|ZNF663|100130934|zinc finger protein 663##AK293861|ELMO2|63916|engulfment and cell motility 2##AK299318|ELMO2|63916|engulfment and cell motility 2##AL833406|ELMO2|63916|engulfment and cell motility 2##BX648819|ELMO2|63916|engulfment and cell motility 2##NM_133171|ELMO2|63916|engulfment and cell motility 2##NM_182764|ELMO2|63916|engulfment and cell motility 2##AK001331|ZNF334|55713|zinc finger protein 334##AK095611|ZNF334|55713|zinc finger protein 334##BC024177|ZNF334|55713|zinc finger protein 334##NM_018102|ZNF334|55713|zinc finger protein 334##NM_199441|ZNF334|55713|zinc finger protein 334##BC026321|ZNF334|55713|zinc finger protein 334##NM_080721|C20orf123|128506|chromosome 20 open reading frame 123##DQ892655|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##DQ895894|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AF154121|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AY072810|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK293902|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK056713|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK295748|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##AK315131|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##BC035966|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193339|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_001193342|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3##NM_022829|SLC13A3|64849|solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3	0.0	
chr4	142419102	142419177	reg1034336.p2	3.406	+	TSC_hg19_v1_chr4_+_142142087 AK294089 AK223609 AK002106 AJ006591	-277053	+	TSC_hg19_v1_chr4_+_142142051 NM_014487 AK315463 BC004421	-277084	+	TSC_hg19_v1_chr4_-_142054516 AB033040 NM_020724	-364608	-	AK290619 NM_000585 NM_172175 BC018149 U14407	138627	+	NM_001101669 NM_003866	1348464	-	TSC_hg19_v1_chr4_+_144106069 BC039115 NM_032557	1686925	+	AK294089|ZNF330|27309|zinc finger protein 330##AK223609|ZNF330|27309|zinc finger protein 330##AK002106|ZNF330|27309|zinc finger protein 330##AJ006591|ZNF330|27309|zinc finger protein 330##NM_014487|ZNF330|27309|zinc finger protein 330##AK315463|ZNF330|27309|zinc finger protein 330##BC004421|ZNF330|27309|zinc finger protein 330##AB033040|RNF150|57484|ring finger protein 150##NM_020724|RNF150|57484|ring finger protein 150##AK290619|IL15|3600|interleukin 15##NM_000585|IL15|3600|interleukin 15##NM_172175|IL15|3600|interleukin 15##BC018149|IL15|3600|interleukin 15##U14407|IL15|3600|interleukin 15##NM_001101669|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##NM_003866|INPP4B|8821|inositol polyphosphate-4-phosphatase, type II, 105kDa##BC039115|USP38|84640|ubiquitin specific peptidase 38##NM_032557|USP38|84640|ubiquitin specific peptidase 38	0.0	
chr4	87882909	87883020	reg1038390.p1	3.406	+	TSC_hg19_v1_chr4_+_87857481 L13743	-25481	+	TSC_hg19_v1_chr4_+_87856199 AK296149 NM_001166693 AK300364 BC017432 AK302199	-26749	+	BC016746 BC063410 NM_144645	-69404	-	TSC_hg19_v1_chr4_+_87928422 L13773 BC114930 NM_005935 AK296243 L25050 AB385236	45357	+	TSC_hg19_v1_chr4_+_87968211 AF177238 AF177239	85287	+	BC041901 TSC_hg19_v1_chr4_-_88141661 BX640727 BX538173 NM_020803 CR749265 BX640744 BX647454 BC041384	258698	-	AK296149|AFF1|4299|AF4/FMR2 family, member 1##NM_001166693|AFF1|4299|AF4/FMR2 family, member 1##AK300364|AFF1|4299|AF4/FMR2 family, member 1##BC017432|AFF1|4299|AF4/FMR2 family, member 1##BC016746|C4orf36|132989|chromosome 4 open reading frame 36##BC063410|C4orf36|132989|chromosome 4 open reading frame 36##NM_144645|C4orf36|132989|chromosome 4 open reading frame 36##L13773|AFF1|4299|AF4/FMR2 family, member 1##BC114930|AFF1|4299|AF4/FMR2 family, member 1##NM_005935|AFF1|4299|AF4/FMR2 family, member 1##AK296243|AFF1|4299|AF4/FMR2 family, member 1##L25050|AFF1|4299|AF4/FMR2 family, member 1##AF177238|AFF1|4299|AF4/FMR2 family, member 1##AF177239|AFF1|4299|AF4/FMR2 family, member 1##BC041901|KLHL8|57563|kelch-like 8 (Drosophila)##BX640727|KLHL8|57563|kelch-like 8 (Drosophila)##BX538173|KLHL8|57563|kelch-like 8 (Drosophila)##NM_020803|KLHL8|57563|kelch-like 8 (Drosophila)##CR749265|KLHL8|57563|kelch-like 8 (Drosophila)##BX640744|KLHL8|57563|kelch-like 8 (Drosophila)##BX647454|KLHL8|57563|kelch-like 8 (Drosophila)##BC041384|KLHL8|57563|kelch-like 8 (Drosophila)	0.0	
chr7	156613230	156613365	reg1033470.p1	3.406	+	TSC_hg19_v1_chr7_-_156468370 CU688401	-144875	-	NM_001184997 AF325690	-177602	+	NM_030936 TSC_hg19_v1_chr7_+_156433487 AK314067 NM_001184996 AL136874 BC028120 AK307316	-179832	+	TSC_hg19_v1_chr7_-_156685868 AL834394 AB463099 AM392621 AM393143 AM393254 AM393828 CU676016 AF402318 BC017663 BC063649 AF107454 AK021727 AK291037 AK299753	72450	-	TSC_hg19_v1_chr7_-_156685878 NM_022458	72619	-	TSC_hg19_v1_chr7_+_156742419 AY576779 NM_138400	129118	+	NM_001184997|RNF32|140545|ring finger protein 32##AF325690|RNF32|140545|ring finger protein 32##NM_030936|RNF32|140545|ring finger protein 32##AK314067|RNF32|140545|ring finger protein 32##NM_001184996|RNF32|140545|ring finger protein 32##AL136874|RNF32|140545|ring finger protein 32##BC028120|RNF32|140545|ring finger protein 32##AK307316|RNF32|140545|ring finger protein 32##AL834394|LMBR1|64327|limb region 1 homolog (mouse)##AM392621|LMBR1|64327|limb region 1 homolog (mouse)##AM393143|LMBR1|64327|limb region 1 homolog (mouse)##AM393254|LMBR1|64327|limb region 1 homolog (mouse)##AM393828|LMBR1|64327|limb region 1 homolog (mouse)##AF402318|LMBR1|64327|limb region 1 homolog (mouse)##BC017663|LMBR1|64327|limb region 1 homolog (mouse)##BC063649|LMBR1|64327|limb region 1 homolog (mouse)##AK021727|LMBR1|64327|limb region 1 homolog (mouse)##AK291037|LMBR1|64327|limb region 1 homolog (mouse)##AK299753|LMBR1|64327|limb region 1 homolog (mouse)##NM_022458|LMBR1|64327|limb region 1 homolog (mouse)##AY576779|NOM1|64434|nucleolar protein with MIF4G domain 1##NM_138400|NOM1|64434|nucleolar protein with MIF4G domain 1	0.0	
chr8	134511635	134511794	reg1022687.p3	3.406	+	AK223542 TSC_hg19_v1_chr8_-_134309496 X92845 BC003175 AK299636 D87953 AF230380 AK091147 AK095649 AK096562 AK296794 AK297342 AK298236 AK307829 AK308117 NM_001135242 NM_006096	-202217	-	AK293031 AK301508 AK315822 NM_001204869 NM_001204870 NM_003882 NM_080838 TSC_hg19_v1_chr8_+_134203281 AF100779 AY196486 AY196487 AY196488 BC074840 BC074841 AB034725	-308384	+	NM_001045556 NM_001045557	-396405	-	BC018357 L29555 TSC_hg19_v1_chr8_-_134584131 AK311319 BX648001 NM_003033 NM_173344	72383	-	AK300133 BC012989 AB167740 AB167741 BC070097 AK300324 AK311494 BC098405 NM_001029939 NM_001167583 NM_001174158	1197080	-	TSC_hg19_v1_chr8_-_135725053 AB463359	1213365	-	AK223542|NDRG1|10397|N-myc downstream regulated 1##X92845|NDRG1|10397|N-myc downstream regulated 1##BC003175|NDRG1|10397|N-myc downstream regulated 1##AK299636|NDRG1|10397|N-myc downstream regulated 1##D87953|NDRG1|10397|N-myc downstream regulated 1##AF230380|NDRG1|10397|N-myc downstream regulated 1##AK091147|NDRG1|10397|N-myc downstream regulated 1##AK095649|NDRG1|10397|N-myc downstream regulated 1##AK096562|NDRG1|10397|N-myc downstream regulated 1##AK296794|NDRG1|10397|N-myc downstream regulated 1##AK297342|NDRG1|10397|N-myc downstream regulated 1##AK298236|NDRG1|10397|N-myc downstream regulated 1##AK307829|NDRG1|10397|N-myc downstream regulated 1##AK308117|NDRG1|10397|N-myc downstream regulated 1##NM_001135242|NDRG1|10397|N-myc downstream regulated 1##NM_006096|NDRG1|10397|N-myc downstream regulated 1##AK293031|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK301508|WISP1|8840|WNT1 inducible signaling pathway protein 1##AK315822|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204869|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001204870|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_003882|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_080838|WISP1|8840|WNT1 inducible signaling pathway protein 1##AF100779|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196486|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196487|WISP1|8840|WNT1 inducible signaling pathway protein 1##AY196488|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074840|WISP1|8840|WNT1 inducible signaling pathway protein 1##BC074841|WISP1|8840|WNT1 inducible signaling pathway protein 1##AB034725|WISP1|8840|WNT1 inducible signaling pathway protein 1##NM_001045556|SLA|6503|Src-like-adaptor##NM_001045557|SLA|6503|Src-like-adaptor##BC018357|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##L29555|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK311319|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##BX648001|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_003033|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##NM_173344|ST3GAL1|6482|ST3 beta-galactoside alpha-2,3-sialyltransferase 1##AK300133|ZFAT|57623|zinc finger and AT hook domain containing##BC012989|ZFAT|57623|zinc finger and AT hook domain containing##AB167740|ZFAT|57623|zinc finger and AT hook domain containing##AB167741|ZFAT|57623|zinc finger and AT hook domain containing##BC070097|ZFAT|57623|zinc finger and AT hook domain containing##AK300324|ZFAT|57623|zinc finger and AT hook domain containing##AK311494|ZFAT|57623|zinc finger and AT hook domain containing##BC098405|ZFAT|57623|zinc finger and AT hook domain containing##NM_001029939|ZFAT|57623|zinc finger and AT hook domain containing##NM_001167583|ZFAT|57623|zinc finger and AT hook domain containing##NM_001174158|ZFAT|57623|zinc finger and AT hook domain containing	0.0	
chr1	155295060	155295139	reg1036338.p2	3.405	+	AK298730 NM_014328 AK093777 AX748300 BC001045 AK307736 TSC_hg19_v1_chr1_+_155294297 AK074485 AB026894 AK074982 BC028055 BC004293 BX640612	-807	+	TSC_hg19_v1_chr1_-_155293939 BC080538 NM_001039517 BC062571	-1157	-	BC052277 NM_001105205	-1372	+	AF257305 TSC_hg19_v1_chr1_-_155532251	237107	-	AB037841 AB209068 NM_018489 TSC_hg19_v1_chr1_-_155532387	237268	-	TSC_hg19_v1_chr1_-_155532562 AK307595	237482	-	AK298730|RUSC1|23623|RUN and SH3 domain containing 1##NM_014328|RUSC1|23623|RUN and SH3 domain containing 1##AK093777|RUSC1|23623|RUN and SH3 domain containing 1##BC001045|RUSC1|23623|RUN and SH3 domain containing 1##AK307736|RUSC1|23623|RUN and SH3 domain containing 1##AK074485|RUSC1|23623|RUN and SH3 domain containing 1##AB026894|RUSC1|23623|RUN and SH3 domain containing 1##AK074982|RUSC1|23623|RUN and SH3 domain containing 1##BC028055|RUSC1|23623|RUN and SH3 domain containing 1##BC004293|RUSC1|23623|RUN and SH3 domain containing 1##BX640612|RUSC1|23623|RUN and SH3 domain containing 1##BC080538|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)##NM_001039517|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)##BC062571|RUSC1-AS1|284618|RUSC1 antisense RNA 1 (non-protein coding)##BC052277|RUSC1|23623|RUN and SH3 domain containing 1##NM_001105205|RUSC1|23623|RUN and SH3 domain containing 1##AF257305|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)##AB037841|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)##AB209068|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)##NM_018489|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)##AK307595|ASH1L|55870|ash1 (absent, small, or homeotic)-like (Drosophila)	0.722691	CTCF.p2:2:0.653
chr11	64643102	64643206	reg1038481.p1	3.405	+	AY648038 NM_017525 TSC_hg19_v1_chr11_-_64612110	-31065	-	AJ297488 AJ297489 NM_130803 NM_130804	-64389	-	TSC_hg19_v1_chr11_-_64578206 NM_000244 NM_130799 U93236 AJ297487 NM_130802	-64960	-	TSC_hg19_v1_chr11_-_64645987 AB384808 AY007161	2828	-	TSC_hg19_v1_chr11_-_64646097 AK300326 AK312316 AK299096 AK098723 AK297654 BC104799 BC104825 AF099011 AF001434 NM_006795	3000	-	AK302930 TSC_hg19_v1_chr11_-_64647140 AK097842	4007	-	AY648038|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##NM_017525|CDC42BPG|55561|CDC42 binding protein kinase gamma (DMPK-like)##AJ297488|MEN1|4221|multiple endocrine neoplasia I##AJ297489|MEN1|4221|multiple endocrine neoplasia I##NM_130803|MEN1|4221|multiple endocrine neoplasia I##NM_130804|MEN1|4221|multiple endocrine neoplasia I##NM_000244|MEN1|4221|multiple endocrine neoplasia I##NM_130799|MEN1|4221|multiple endocrine neoplasia I##U93236|MEN1|4221|multiple endocrine neoplasia I##AJ297487|MEN1|4221|multiple endocrine neoplasia I##NM_130802|MEN1|4221|multiple endocrine neoplasia I##AY007161|EHD1|10938|EH-domain containing 1##AK300326|EHD1|10938|EH-domain containing 1##AK312316|EHD1|10938|EH-domain containing 1##AK299096|EHD1|10938|EH-domain containing 1##AK098723|EHD1|10938|EH-domain containing 1##AK297654|EHD1|10938|EH-domain containing 1##BC104799|EHD1|10938|EH-domain containing 1##BC104825|EHD1|10938|EH-domain containing 1##AF099011|EHD1|10938|EH-domain containing 1##AF001434|EHD1|10938|EH-domain containing 1##NM_006795|EHD1|10938|EH-domain containing 1##AK302930|EHD1|10938|EH-domain containing 1##AK097842|EHD1|10938|EH-domain containing 1	0.011769	
chr12	57504240	57504421	reg1040138.p1	3.405	+	AK291044 NM_001178079	-242	-	TSC_hg19_v1_chr12_+_57482929 BC007756 AB463930 CU688106	-21343	+	TSC_hg19_v1_chr12_+_57482900 BC065931 AK314229 U48361	-21428	+	TSC_hg19_v1_chr12_-_57505013 AK316236 BC075852 AK298721 AK312471 U16031	675	-	TSC_hg19_v1_chr12_-_57505144 AK290431 AK299094 AK316142 BC004973 BC005823	815	-	TSC_hg19_v1_chr12_-_57505177 NM_001178078 NM_001178080 NM_001178081 NM_003153	867	-	AK291044|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178079|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC007756|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##BC065931|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##AK314229|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##U48361|NAB2|4665|NGFI-A binding protein 2 (EGR1 binding protein 2)##AK316236|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC075852|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK298721|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK312471|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##U16031|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK290431|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK299094|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##AK316142|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC004973|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##BC005823|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178078|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178080|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_001178081|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced##NM_003153|STAT6|6778|signal transducer and activator of transcription 6, interleukin-4 induced	0.0	
chr13	21102709	21102889	reg1043525.p1	3.405	+	BC119660 BC119661 TSC_hg19_v1_chr13_-_21099959 AF160216 AF077049 AF087898 AK024041 BC071810 NM_015974	-2826	-	NM_001110219 NM_001110220 NM_001110221	-296266	-	NM_006783	-297428	-	NM_006531 NM_175605 U20362 TSC_hg19_v1_chr13_+_21141275 BC030776	38442	+	TSC_hg19_v1_chr13_+_21141298 AK300769 AK310223 AK308281 AK303853 BC059357	38507	+	TSC_hg19_v1_chr13_+_21183940 BC039413	81178	+	BC119660|CRYL1|51084|crystallin, lambda 1##BC119661|CRYL1|51084|crystallin, lambda 1##AF160216|CRYL1|51084|crystallin, lambda 1##AF077049|CRYL1|51084|crystallin, lambda 1##AF087898|CRYL1|51084|crystallin, lambda 1##AK024041|CRYL1|51084|crystallin, lambda 1##BC071810|CRYL1|51084|crystallin, lambda 1##NM_015974|CRYL1|51084|crystallin, lambda 1##NM_001110219|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110220|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_001110221|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006783|GJB6|10804|gap junction protein, beta 6, 30kDa##NM_006531|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##NM_175605|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##U20362|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC030776|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK300769|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK310223|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK308281|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##AK303853|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)##BC059357|IFT88|8100|intraflagellar transport 88 homolog (Chlamydomonas)	0.0	
chr15	67081540	67081645	reg1035796.p2	3.405	+	NM_001142861 U59914	-80663	+	BC052569 BC012986 AF037469 AF043640 AM909653 TSC_hg19_v1_chr15_+_66995671	-86033	+	AF035528 TSC_hg19_v1_chr15_+_66994671 NM_005585	-86918	+	TSC_hg19_v1_chr15_+_67358179 AK290881	276583	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	276809	+	NM_001145102 AK316017	336531	+	NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##BC052569|SMAD6|4091|SMAD family member 6##BC012986|SMAD6|4091|SMAD family member 6##AF037469|SMAD6|4091|SMAD family member 6##AF043640|SMAD6|4091|SMAD family member 6##AM909653|SMAD6|4091|SMAD family member 6##AF035528|SMAD6|4091|SMAD family member 6##NM_005585|SMAD6|4091|SMAD family member 6##AK290881|SMAD3|4088|SMAD family member 3##NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3	0.177638	
chr16	33241062	33241174	reg1039415.p2	3.405	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	-35520	+	AL133588 NM_016212	-36139	+	AK300387 TSC_hg19_v1_chr16_+_32752635	-488482	+	AL133588 NM_016212	20396	+	AB023508 BC096733 BC098165 NM_001099687 NM_001205259 NM_001205260 NM_001205265 AK312220 CR541650	21015	+	TSC_hg19_v1_chr16_-_46655275 EU176232 EU176536 EU176544 AK292164 AK310430 AK315706 AK055931 BC030699	13414154	-	AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AK300387|LOC100289574|100289574|hect domain and RLD 2 pseudogene##AL133588|TP53TG3|24150|TP53 target 3##NM_016212|TP53TG3|24150|TP53 target 3##AB023508|TP53TG3|24150|TP53 target 3##BC096733|TP53TG3|24150|TP53 target 3##BC098165|TP53TG3|24150|TP53 target 3##NM_001099687|TP53TG3B|729355|TP53 target 3B##NM_001205259|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205260|LOC653550|653550|TP53-target gene 3 protein-like##NM_001205265|TP53TG3B|729355|TP53 target 3B##AK312220|TP53TG3|24150|TP53 target 3##CR541650|TP53TG3|24150|TP53 target 3##EU176232|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176536|SHCBP1|79801|SHC SH2-domain binding protein 1##EU176544|SHCBP1|79801|SHC SH2-domain binding protein 1##AK292164|SHCBP1|79801|SHC SH2-domain binding protein 1##AK310430|SHCBP1|79801|SHC SH2-domain binding protein 1##AK315706|SHCBP1|79801|SHC SH2-domain binding protein 1##AK055931|SHCBP1|79801|SHC SH2-domain binding protein 1##BC030699|SHCBP1|79801|SHC SH2-domain binding protein 1	0.0	
chr17	47288065	47288164	reg1031995.p2	3.405	+	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-37	+	NM_001198754	-179	-	AB037886 NM_001135186 NM_016428	-526	+	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	20029	-	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	151466	-	BC095460 TSC_hg19_v1_chr17_-_47492215	204101	-	BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AB037886|ABI3|51225|ABI family, member 3##NM_001135186|ABI3|51225|ABI family, member 3##NM_016428|ABI3|51225|ABI family, member 3##BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC095460|PHB|5245|prohibitin	0.0	
chr17	61989007	61989094	reg1017639.p1	3.405	+	BC119747 BC029365 NM_001318 NM_022579 NM_022580 NM_022581 AX772828	-393	-	BT006926 J00118 BC002717 AK291587 BC005921 BC057768 BC062775 BC020756 NM_001317 M35419	-15099	-	AB451332 AB451477 AF006061 AF006060 M38451 BC020760 J03756 NM_002059 NM_022556 NM_022557 NM_022558 AK312194	-29859	-	M14398 AF110644 AF185611 BC075012 BC075013 V00519 BC062475 BC090045 AK300190 AY613431 AY613432 NM_000515 NM_022559 NM_022560 NM_022561 NM_022562	7116	-	S52229 S79249 X83539 M80461 BC032651 BC002975 BC030210 AX775815 AX775817 AK222954 AK313583 AK223210 NM_000626 NM_001039933 NM_021602 M89957	20616	-	AY212253 M81758 NM_000334	61188	-	BC119747|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BC029365|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_001318|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022579|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022580|CSHL1|1444|chorionic somatomammotropin hormone-like 1##NM_022581|CSHL1|1444|chorionic somatomammotropin hormone-like 1##BT006926|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##J00118|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC002717|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##AK291587|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC005921|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC057768|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC062775|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##BC020756|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##NM_001317|CSH1|1442|chorionic somatomammotropin hormone 1 (placental lactogen)##AB451332|GH2|2689|growth hormone 2##AB451477|GH2|2689|growth hormone 2##AF006061|GH2|2689|growth hormone 2##AF006060|GH2|2689|growth hormone 2##M38451|GH2|2689|growth hormone 2##BC020760|GH2|2689|growth hormone 2##J03756|GH2|2689|growth hormone 2##NM_002059|GH2|2689|growth hormone 2##NM_022556|GH2|2689|growth hormone 2##NM_022557|GH2|2689|growth hormone 2##NM_022558|GH2|2689|growth hormone 2##AK312194|GH2|2689|growth hormone 2##M14398|GH1|2688|growth hormone 1##AF110644|GH1|2688|growth hormone 1##AF185611|GH1|2688|growth hormone 1##BC075012|GH1|2688|growth hormone 1##BC075013|GH1|2688|growth hormone 1##V00519|GH1|2688|growth hormone 1##BC062475|GH1|2688|growth hormone 1##BC090045|GH1|2688|growth hormone 1##AY613431|GH1|2688|growth hormone 1##AY613432|GH1|2688|growth hormone 1##NM_000515|GH1|2688|growth hormone 1##NM_022559|GH1|2688|growth hormone 1##NM_022560|GH1|2688|growth hormone 1##NM_022561|GH1|2688|growth hormone 1##NM_022562|GH1|2688|growth hormone 1##S52229|CD79B|974|CD79b molecule, immunoglobulin-associated beta##S79249|CD79B|974|CD79b molecule, immunoglobulin-associated beta##X83539|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M80461|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC032651|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC002975|CD79B|974|CD79b molecule, immunoglobulin-associated beta##BC030210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775815|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AX775817|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK222954|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK313583|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AK223210|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_000626|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_001039933|CD79B|974|CD79b molecule, immunoglobulin-associated beta##NM_021602|CD79B|974|CD79b molecule, immunoglobulin-associated beta##M89957|CD79B|974|CD79b molecule, immunoglobulin-associated beta##AY212253|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##M81758|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit##NM_000334|SCN4A|6329|sodium channel, voltage-gated, type IV, alpha subunit	0.0	
chr19	13957999	13958179	reg1035658.p1	3.405	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	-10987	-	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-51844	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-72805	+	BC101209 BC101210 NM_001098622	29973	+	AK097431 NM_024323	58819	-	NM_017721 TSC_hg19_v1_chr19_+_14017006	58891	+	AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57##NM_017721|CC2D1A|54862|coiled-coil and C2 domain containing 1A	0.0	
chr20	46993726	46993792	reg1042608.p2	3.405	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-578441	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-579007	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-863075	+	AB037836 TSC_hg19_v1_chr20_-_47444291	450527	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	450680	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	544559	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.0	
chr20	54967516	54967685	reg1042303.p1	3.405	+	TSC_hg19_v1_chr20_+_54967593 NM_001324 L02547	-3	+	TSC_hg19_v1_chr20_+_54967443 NM_001033521 AK307144	-176	+	BC002499 TSC_hg19_v1_chr20_-_54967272 BC006423 AF011468 BC001280 D84212 AK312776 BC027464 AK301769 NM_003600 NM_198433 NM_198434 NM_198435 NM_198436 NM_198437	-315	-	TSC_hg19_v1_chr20_+_54967709 AK293182 AK312774 NM_001033522 BC001011 BC007425	117	+	AJ276678 NM_001164116 AX721200 AK308057 NM_001164114 NM_001164115 NM_020356 AK027760 BC027951 AK314653 AK295613	19707	+	NM_016407 TSC_hg19_v1_chr20_+_55043664	76059	+	NM_001324|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##L02547|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##NM_001033521|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##BC002499|AURKA|6790|aurora kinase A##BC006423|AURKA|6790|aurora kinase A##AF011468|AURKA|6790|aurora kinase A##BC001280|AURKA|6790|aurora kinase A##D84212|AURKA|6790|aurora kinase A##AK312776|AURKA|6790|aurora kinase A##BC027464|AURKA|6790|aurora kinase A##AK301769|AURKA|6790|aurora kinase A##NM_003600|AURKA|6790|aurora kinase A##NM_198433|AURKA|6790|aurora kinase A##NM_198434|AURKA|6790|aurora kinase A##NM_198435|AURKA|6790|aurora kinase A##NM_198436|AURKA|6790|aurora kinase A##NM_198437|AURKA|6790|aurora kinase A##AK293182|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##AK312774|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##NM_001033522|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##BC001011|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##BC007425|CSTF1|1477|cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa##AJ276678|CASS4|57091|Cas scaffolding protein family member 4##NM_001164116|CASS4|57091|Cas scaffolding protein family member 4##AK308057|CASS4|57091|Cas scaffolding protein family member 4##NM_001164114|CASS4|57091|Cas scaffolding protein family member 4##NM_001164115|CASS4|57091|Cas scaffolding protein family member 4##NM_020356|CASS4|57091|Cas scaffolding protein family member 4##AK027760|CASS4|57091|Cas scaffolding protein family member 4##BC027951|CASS4|57091|Cas scaffolding protein family member 4##AK314653|CASS4|57091|Cas scaffolding protein family member 4##AK295613|CASS4|57091|Cas scaffolding protein family member 4##NM_016407|C20orf43|51507|chromosome 20 open reading frame 43	0.0	
chr2	11094050	11094116	reg1036811.p2	3.405	+	BC026110 NM_002236 TSC_hg19_v1_chr2_+_11052109	-41998	+	TSC_hg19_v1_chr2_-_10952912 AK294347 D49489 BC001312 NM_005742	-141163	-	TSC_hg19_v1_chr2_-_10952851 DQ891186 DQ894369 AK289428	-141255	-	AK057872 NM_182500 BC120930 AK292828	179133	+	BC027625 NM_152391 TSC_hg19_v1_chr2_+_11295562	201468	+	TSC_hg19_v1_chr2_+_11295592 AK001091	201498	+	BC026110|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##NM_002236|KCNF1|3754|potassium voltage-gated channel, subfamily F, member 1##AK294347|PDIA6|10130|protein disulfide isomerase family A, member 6##D49489|PDIA6|10130|protein disulfide isomerase family A, member 6##BC001312|PDIA6|10130|protein disulfide isomerase family A, member 6##NM_005742|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ891186|PDIA6|10130|protein disulfide isomerase family A, member 6##DQ894369|PDIA6|10130|protein disulfide isomerase family A, member 6##AK289428|PDIA6|10130|protein disulfide isomerase family A, member 6##AK057872|C2orf50|130813|chromosome 2 open reading frame 50##NM_182500|C2orf50|130813|chromosome 2 open reading frame 50##BC120930|C2orf50|130813|chromosome 2 open reading frame 50##AK292828|C2orf50|130813|chromosome 2 open reading frame 50##BC027625|PQLC3|130814|PQ loop repeat containing 3##NM_152391|PQLC3|130814|PQ loop repeat containing 3##AK001091|PQLC3|130814|PQ loop repeat containing 3	0.0	
chr2	201988513	201988640	reg1039470.p1	3.405	+	TSC_hg19_v1_chr2_+_201983419 AK289913 AK315208	-5104	+	AF015450 NM_001127183 AK308767 TSC_hg19_v1_chr2_+_201983395	-5245	+	AF009616 TSC_hg19_v1_chr2_+_201981056 AF010127 U97074 AK315924 BC001602 AB209600	-7535	+	NM_001202518 AK304585 AF041462	9146	+	AF041459 NM_001202515	16421	+	NM_001206524 NM_001206542 NM_001230 NM_032974 NM_032976 NM_032977	59044	+	AK289913|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK315208|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF015450|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001127183|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK308767|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF009616|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF010127|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##U97074|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK315924|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##BC001602|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AB209600|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202518|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AK304585|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF041462|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##AF041459|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001202515|CFLAR|8837|CASP8 and FADD-like apoptosis regulator##NM_001206524|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001206542|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_001230|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032974|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032976|CASP10|843|caspase 10, apoptosis-related cysteine peptidase##NM_032977|CASP10|843|caspase 10, apoptosis-related cysteine peptidase	0.0	
chr2	232893586	232893671	reg1037075.p2	3.405	+	AK094293 NM_152383 AF443854 BC026166 BC036113 BX648325 TSC_hg19_v1_chr2_+_232826422 AK295363	-67268	+	BC069120 AB464626 BC105065 BC105067 NM_024409 TSC_hg19_v1_chr2_-_232791107	-102595	-	TSC_hg19_v1_chr2_+_232651154 AK024273 AK222879 BC091493 AK022674 NM_022730	-242512	+	AK312931 NM_001632 BC094743 AK075432 BC009647 BC068501 M13077 M14170 M12551	349755	+	NM_031313 J04948 AK293017 BC014139 X55958 X53279	377948	+	AK313163 NM_001631 BC132678 M31008 M15694	427242	+	AK094293|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##NM_152383|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AF443854|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC026166|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC036113|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BX648325|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##AK295363|DIS3L2|129563|DIS3 mitotic control homolog (S. cerevisiae)-like 2##BC069120|NPPC|4880|natriuretic peptide C##BC105065|NPPC|4880|natriuretic peptide C##BC105067|NPPC|4880|natriuretic peptide C##NM_024409|NPPC|4880|natriuretic peptide C##AK024273|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK222879|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##BC091493|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK022674|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##NM_022730|COPS7B|64708|COP9 constitutive photomorphogenic homolog subunit 7B (Arabidopsis)##AK312931|ALPP|250|alkaline phosphatase, placental##NM_001632|ALPP|250|alkaline phosphatase, placental##BC094743|ALPP|250|alkaline phosphatase, placental##AK075432|ALPP|250|alkaline phosphatase, placental##BC009647|ALPP|250|alkaline phosphatase, placental##BC068501|ALPP|250|alkaline phosphatase, placental##M13077|ALPP|250|alkaline phosphatase, placental##M14170|ALPP|250|alkaline phosphatase, placental##M12551|ALPP|250|alkaline phosphatase, placental##NM_031313|ALPPL2|251|alkaline phosphatase, placental-like 2##J04948|ALPPL2|251|alkaline phosphatase, placental-like 2##AK293017|ALPPL2|251|alkaline phosphatase, placental-like 2##BC014139|ALPPL2|251|alkaline phosphatase, placental-like 2##X55958|ALPPL2|251|alkaline phosphatase, placental-like 2##X53279|ALPPL2|251|alkaline phosphatase, placental-like 2##AK313163|ALPI|248|alkaline phosphatase, intestinal##NM_001631|ALPI|248|alkaline phosphatase, intestinal##BC132678|ALPI|248|alkaline phosphatase, intestinal##M31008|ALPI|248|alkaline phosphatase, intestinal##M15694|ALPI|248|alkaline phosphatase, intestinal	0.0	
chr3	33957428	33957536	reg1038850.p2	3.405	+	TSC_hg19_v1_chr3_+_33840125 AF250394 GQ131806 AB384596 CU676494 CU686637 BT007367	-117311	+	TSC_hg19_v1_chr3_+_33840120 AF151793 BC020066	-117375	+	TSC_hg19_v1_chr3_+_33840081 BC068454 AF349951	-117399	+	TSC_hg19_v1_chr3_+_35681016 BC041385 AK057559	1723619	+	BC051828 NM_016300	1726366	+	AK055064 NM_001025068 NM_001025069 AK289868 AF112220 AK289649 AK294484	1763714	+	AF250394|PDCD6IP|10015|programmed cell death 6 interacting protein##GQ131806|PDCD6IP|10015|programmed cell death 6 interacting protein##BT007367|PDCD6IP|10015|programmed cell death 6 interacting protein##AF151793|PDCD6IP|10015|programmed cell death 6 interacting protein##BC020066|PDCD6IP|10015|programmed cell death 6 interacting protein##BC068454|PDCD6IP|10015|programmed cell death 6 interacting protein##AF349951|PDCD6IP|10015|programmed cell death 6 interacting protein##BC041385|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK057559|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##BC051828|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_016300|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK055064|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025068|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##NM_001025069|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289868|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AF112220|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK289649|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa##AK294484|ARPP21|10777|cAMP-regulated phosphoprotein, 21kDa	0.299068	CTCF.p2:-15:0.299
chr4	67987905	67987990	reg1042690.p1	3.405	+	TSC_hg19_v1_chr4_-_66536182 AB209375	-1451750	-	AK307826 NM_004439 NM_182472	-1452295	-	AX771275 AX771283 AX771273 BX647590 AX771281 AX771280 AK290606 AX771274 BC072463 AL833108 NM_001010874 AX771267 AX771272	-2712851	-	CU688992 TSC_hg19_v1_chr4_-_68411171	423176	-	TSC_hg19_v1_chr4_-_68411224 BC030695 BX648166 BC041117 AK307928 AK308170 M95724	423261	-	TSC_hg19_v1_chr4_-_68411282 NM_001812	423331	-	AB209375|EPHA5|2044|EPH receptor A5##AK307826|EPHA5|2044|EPH receptor A5##NM_004439|EPHA5|2044|EPH receptor A5##NM_182472|EPHA5|2044|EPH receptor A5##BX647590|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AK290606|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC072463|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##AL833108|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##NM_001010874|TECRL|253017|trans-2,3-enoyl-CoA reductase-like##BC030695|CENPC1|1060|centromere protein C 1##BX648166|CENPC1|1060|centromere protein C 1##BC041117|CENPC1|1060|centromere protein C 1##AK307928|CENPC1|1060|centromere protein C 1##AK308170|CENPC1|1060|centromere protein C 1##M95724|CENPC1|1060|centromere protein C 1##NM_001812|CENPC1|1060|centromere protein C 1	0.692612	CTCF.p2:-4:0.693
chr4	87486176	87486277	reg1042812.p2	3.405	+	NM_002753 U07620 BC051731 AK225974 TSC_hg19_v1_chr4_-_87374361	-111903	-	NM_138980 NM_138982	-204852	-	BC022492 TSC_hg19_v1_chr4_-_87281197 BC035057	-205030	-	TSC_hg19_v1_chr4_+_87515468 AK056151 NM_006264 NM_080683 NM_080684 NM_080685 BC139915 U12132 U12129 U12130	29247	+	AJ583502 BC107051 BC107052 EF437223 NM_197965	284115	-	BC016746 BC063410 NM_144645	327334	-	NM_002753|MAPK10|5602|mitogen-activated protein kinase 10##U07620|MAPK10|5602|mitogen-activated protein kinase 10##BC051731|MAPK10|5602|mitogen-activated protein kinase 10##AK225974|MAPK10|5602|mitogen-activated protein kinase 10##NM_138980|MAPK10|5602|mitogen-activated protein kinase 10##NM_138982|MAPK10|5602|mitogen-activated protein kinase 10##BC022492|MAPK10|5602|mitogen-activated protein kinase 10##BC035057|MAPK10|5602|mitogen-activated protein kinase 10##AK056151|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_006264|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080683|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080684|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##NM_080685|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##BC139915|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##U12132|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##U12129|PTPN13|5783|protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)##AJ583502|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC107051|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC107052|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##EF437223|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##NM_197965|SLC10A6|345274|solute carrier family 10 (sodium/bile acid cotransporter family), member 6##BC016746|C4orf36|132989|chromosome 4 open reading frame 36##BC063410|C4orf36|132989|chromosome 4 open reading frame 36##NM_144645|C4orf36|132989|chromosome 4 open reading frame 36	0.156137	
chr5	150381935	150382054	reg1039652.p1	3.405	+	TSC_hg19_v1_chr5_-_150326105 BC117490 BC126474 AK091436 AX746982 AK096536 BC022559	-55871	-	TSC_hg19_v1_chr5_-_150284541 AK096465 NM_001172831 NM_001172832 NM_052860	-97471	-	TSC_hg19_v1_chr5_-_150284430 AK300528	-97548	-	TSC_hg19_v1_chr5_+_150399998 NM_002084	18009	+	TSC_hg19_v1_chr5_+_150400151 AK310242 BC066949 D00632 BC025956 BC035841 BC050378 BC013218 BC013601 AF217787 CU690654	18179	+	BC012133 BX640647 TSC_hg19_v1_chr5_-_150460585 AK074400 BC007666 AK299975 AK303573	78580	-	BC117490|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##BC126474|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##AK091436|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##AK096536|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##BC022559|ZNF300P1|134466|zinc finger protein 300 pseudogene 1##AK096465|ZNF300|91975|zinc finger protein 300##NM_001172831|ZNF300|91975|zinc finger protein 300##NM_001172832|ZNF300|91975|zinc finger protein 300##NM_052860|ZNF300|91975|zinc finger protein 300##AK300528|ZNF300|91975|zinc finger protein 300##NM_002084|GPX3|2878|glutathione peroxidase 3 (plasma)##AK310242|GPX3|2878|glutathione peroxidase 3 (plasma)##BC066949|GPX3|2878|glutathione peroxidase 3 (plasma)##D00632|GPX3|2878|glutathione peroxidase 3 (plasma)##BC025956|GPX3|2878|glutathione peroxidase 3 (plasma)##BC035841|GPX3|2878|glutathione peroxidase 3 (plasma)##BC050378|GPX3|2878|glutathione peroxidase 3 (plasma)##BC013218|GPX3|2878|glutathione peroxidase 3 (plasma)##BC013601|GPX3|2878|glutathione peroxidase 3 (plasma)##AF217787|GPX3|2878|glutathione peroxidase 3 (plasma)##BC012133|TNIP1|10318|TNFAIP3 interacting protein 1##BX640647|TNIP1|10318|TNFAIP3 interacting protein 1##AK074400|TNIP1|10318|TNFAIP3 interacting protein 1##BC007666|TNIP1|10318|TNFAIP3 interacting protein 1##AK299975|TNIP1|10318|TNFAIP3 interacting protein 1##AK303573|TNIP1|10318|TNFAIP3 interacting protein 1	0.990072	CTCF.p2:-21:0.990
chr7	134117352	134117532	reg1011598.p1	3.405	+	TSC_hg19_v1_chr7_-_134001749 AB052892 NM_032826	-115655	-	AJ971941 TSC_hg19_v1_chr7_-_134001622 AK075368 BC008413 AJ315497 AJ315498 AK307621 AK027603 AK222874	-115819	-	BC104897 BC104899 AK057348 NM_144648	-305365	+	TSC_hg19_v1_chr7_-_134143853 AB209796 BT019859 CR450351 CR542203 CU675153 J04795 DQ890758 DQ892546 DQ893921 DQ895757 M34720 AF328729 J05474 J05017 BC010391 BC005387 X15414	26391	-	TSC_hg19_v1_chr7_-_134143878 AK313439 BC000260 NM_001628 AK311339	26522	-	AF524864 NM_020299 BC008837	94928	+	AB052892|SLC35B4|84912|solute carrier family 35, member B4##NM_032826|SLC35B4|84912|solute carrier family 35, member B4##AJ971941|SLC35B4|84912|solute carrier family 35, member B4##AK075368|SLC35B4|84912|solute carrier family 35, member B4##BC008413|SLC35B4|84912|solute carrier family 35, member B4##AJ315497|SLC35B4|84912|solute carrier family 35, member B4##AJ315498|SLC35B4|84912|solute carrier family 35, member B4##AK307621|SLC35B4|84912|solute carrier family 35, member B4##AK027603|SLC35B4|84912|solute carrier family 35, member B4##AK222874|SLC35B4|84912|solute carrier family 35, member B4##BC104897|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##BC104899|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AK057348|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##NM_144648|LRGUK|136332|leucine-rich repeats and guanylate kinase domain containing##AB209796|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BT019859|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR450351|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##CR542203|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J04795|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ890758|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ892546|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ893921|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##DQ895757|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##M34720|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF328729|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05474|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##J05017|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC010391|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC005387|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##X15414|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK313439|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##BC000260|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##NM_001628|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AK311339|AKR1B1|231|aldo-keto reductase family 1, member B1 (aldose reductase)##AF524864|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##NM_020299|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)##BC008837|AKR1B10|57016|aldo-keto reductase family 1, member B10 (aldose reductase)	0.0	
chr7	77020765	77020906	reg1040030.p2	3.405	+	CU676076 CU689762 GQ129349 GQ129350 AK222999 AK312672 BC073986 TSC_hg19_v1_chr7_-_76829135 BC017813 BC033820 Z36531 NM_006682 AK310921	-191699	-	BC036053 NM_020879 BX649000 AK292491 HM370402	-268889	+	BC144677 BC000487 U10099 TSC_hg19_v1_chr7_-_76256606 NM_012230 NM_152992	-764288	-	TSC_hg19_v1_chr7_-_77045731 BC110797 NM_017439	24883	-	TSC_hg19_v1_chr7_+_77166392 BC050008	145543	+	TSC_hg19_v1_chr7_+_77166764 NM_002835 AB209524 AK314236 AK289573 M93425 D13380 AB384966	145971	+	GQ129349|FGL2|10875|fibrinogen-like 2##GQ129350|FGL2|10875|fibrinogen-like 2##AK222999|FGL2|10875|fibrinogen-like 2##AK312672|FGL2|10875|fibrinogen-like 2##BC073986|FGL2|10875|fibrinogen-like 2##BC017813|FGL2|10875|fibrinogen-like 2##BC033820|FGL2|10875|fibrinogen-like 2##Z36531|FGL2|10875|fibrinogen-like 2##NM_006682|FGL2|10875|fibrinogen-like 2##BC036053|CCDC146|57639|coiled-coil domain containing 146##NM_020879|CCDC146|57639|coiled-coil domain containing 146##BX649000|CCDC146|57639|coiled-coil domain containing 146##AK292491|CCDC146|57639|coiled-coil domain containing 146##HM370402|CCDC146|57639|coiled-coil domain containing 146##BC000487|POMZP3|22932|POM121 and ZP3 fusion##U10099|POMZP3|22932|POM121 and ZP3 fusion##NM_012230|POMZP3|22932|POM121 and ZP3 fusion##NM_152992|POMZP3|22932|POM121 and ZP3 fusion##BC110797|PION|54103|pigeon homolog (Drosophila)##NM_017439|PION|54103|pigeon homolog (Drosophila)##BC050008|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##NM_002835|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AB209524|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK314236|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##AK289573|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##M93425|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12##D13380|PTPN12|5782|protein tyrosine phosphatase, non-receptor type 12	0.0	
chr8	21858971	21859070	reg1039017.p1	3.405	+	TSC_hg19_v1_chr8_+_21777257 AK291472 AB018288 AF064729 CU689010	-81772	+	TSC_hg19_v1_chr8_+_21777194 NM_015024 BC030785	-81831	+	AB528923 AF034970 CU689448 DQ890550 DQ896808 AK292126 BC032623 AK226110 AK296671 TSC_hg19_v1_chr8_-_21771202 NM_003974	-87855	-	TSC_hg19_v1_chr8_+_21881644 AK094267	22615	+	AY262114 NM_182795 BC068078	23337	+	BC105131 BC113489 BC143789 AY358869 AB009249 BC069475 NM_003867 HQ258756	41394	+	AK291472|XPO7|23039|exportin 7##AB018288|XPO7|23039|exportin 7##AF064729|XPO7|23039|exportin 7##NM_015024|XPO7|23039|exportin 7##BC030785|XPO7|23039|exportin 7##AF034970|DOK2|9046|docking protein 2, 56kDa##DQ890550|DOK2|9046|docking protein 2, 56kDa##DQ896808|DOK2|9046|docking protein 2, 56kDa##AK292126|DOK2|9046|docking protein 2, 56kDa##BC032623|DOK2|9046|docking protein 2, 56kDa##AK226110|DOK2|9046|docking protein 2, 56kDa##AK296671|DOK2|9046|docking protein 2, 56kDa##NM_003974|DOK2|9046|docking protein 2, 56kDa##AK094267|NPM2|10361|nucleophosmin/nucleoplasmin 2##AY262114|NPM2|10361|nucleophosmin/nucleoplasmin 2##NM_182795|NPM2|10361|nucleophosmin/nucleoplasmin 2##BC068078|NPM2|10361|nucleophosmin/nucleoplasmin 2##BC105131|FGF17|8822|fibroblast growth factor 17##BC113489|FGF17|8822|fibroblast growth factor 17##BC143789|FGF17|8822|fibroblast growth factor 17##AY358869|FGF17|8822|fibroblast growth factor 17##AB009249|FGF17|8822|fibroblast growth factor 17##BC069475|FGF17|8822|fibroblast growth factor 17##NM_003867|FGF17|8822|fibroblast growth factor 17##HQ258756|FGF17|8822|fibroblast growth factor 17	0.0	
chr9	123655114	123655181	reg1042752.p2	3.405	+	BC108663 NM_001009936 NM_015651 TSC_hg19_v1_chr9_-_123639617	-15547	-	TSC_hg19_v1_chr9_-_123639471 AK122744 BC022374 AK303433	-15669	-	AK096706 TSC_hg19_v1_chr9_+_123605361 BX648532 BC028086 BC052374 BC040969	-49773	+	AK295959 NM_001190947	21702	-	AB590501 BT019408 CU692854 TSC_hg19_v1_chr9_-_123688443 U19261 BC024145	33256	-	AK090468 NM_005658	34025	-	BC108663|PHF19|26147|PHD finger protein 19##NM_001009936|PHF19|26147|PHD finger protein 19##NM_015651|PHF19|26147|PHD finger protein 19##AK122744|PHF19|26147|PHD finger protein 19##BC022374|PHF19|26147|PHD finger protein 19##AK303433|PHF19|26147|PHD finger protein 19##AK096706|LOC253039|253039|uncharacterized LOC253039##BX648532|LOC253039|253039|uncharacterized LOC253039##BC028086|LOC253039|253039|uncharacterized LOC253039##BC052374|LOC253039|253039|uncharacterized LOC253039##BC040969|LOC253039|253039|uncharacterized LOC253039##AK295959|TRAF1|7185|TNF receptor-associated factor 1##NM_001190947|TRAF1|7185|TNF receptor-associated factor 1##BT019408|TRAF1|7185|TNF receptor-associated factor 1##U19261|TRAF1|7185|TNF receptor-associated factor 1##BC024145|TRAF1|7185|TNF receptor-associated factor 1##AK090468|TRAF1|7185|TNF receptor-associated factor 1##NM_005658|TRAF1|7185|TNF receptor-associated factor 1	0.0	
chrX	130868577	130868654	reg1007744.p1	3.405	+	BC137050 AB529233 NM_001004486	-190617	+	TSC_hg19_v1_chrX_-_130423393 NM_001170961 NM_001170962 NM_001555 NM_205833	-445203	-	Y10523 AK057916 BC063884 AF034198 TSC_hg19_v1_chrX_-_130423274 AB058894 AK226008 AK307871	-445353	-	TSC_hg19_v1_chrX_-_130964633 AK097911	96036	-	TSC_hg19_v1_chrX_+_131157329 NM_001042453 NM_016542 AB040057 AK075150 AK303583 AK316137 AK314356 BC070056 AK075107 BC098315 BC099737 BC099843 BC103503 BC017213 AF231012	288706	+	AF344882 AF344883 NM_001042452 AB527620 EU832781 GQ129321 BT020099	289025	+	BC137050|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001004486|OR13H1|347468|olfactory receptor, family 13, subfamily H, member 1##NM_001170961|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001170962|IGSF1|3547|immunoglobulin superfamily, member 1##NM_001555|IGSF1|3547|immunoglobulin superfamily, member 1##NM_205833|IGSF1|3547|immunoglobulin superfamily, member 1##Y10523|IGSF1|3547|immunoglobulin superfamily, member 1##AK057916|IGSF1|3547|immunoglobulin superfamily, member 1##BC063884|IGSF1|3547|immunoglobulin superfamily, member 1##AF034198|IGSF1|3547|immunoglobulin superfamily, member 1##AB058894|IGSF1|3547|immunoglobulin superfamily, member 1##AK226008|IGSF1|3547|immunoglobulin superfamily, member 1##AK307871|IGSF1|3547|immunoglobulin superfamily, member 1##AK097911|LOC286467|286467|family with sequence similarity 195, member A pseudogene##NM_001042453|MST4|51765|serine/threonine protein kinase MST4##NM_016542|MST4|51765|serine/threonine protein kinase MST4##AB040057|MST4|51765|serine/threonine protein kinase MST4##AK075150|MST4|51765|serine/threonine protein kinase MST4##AK303583|MST4|51765|serine/threonine protein kinase MST4##AK316137|MST4|51765|serine/threonine protein kinase MST4##AK314356|MST4|51765|serine/threonine protein kinase MST4##BC070056|MST4|51765|serine/threonine protein kinase MST4##AK075107|MST4|51765|serine/threonine protein kinase MST4##BC098315|MST4|51765|serine/threonine protein kinase MST4##BC099737|MST4|51765|serine/threonine protein kinase MST4##BC099843|MST4|51765|serine/threonine protein kinase MST4##BC103503|MST4|51765|serine/threonine protein kinase MST4##BC017213|MST4|51765|serine/threonine protein kinase MST4##AF231012|MST4|51765|serine/threonine protein kinase MST4##AF344882|MST4|51765|serine/threonine protein kinase MST4##AF344883|MST4|51765|serine/threonine protein kinase MST4##NM_001042452|MST4|51765|serine/threonine protein kinase MST4##EU832781|MST4|51765|serine/threonine protein kinase MST4##GQ129321|MST4|51765|serine/threonine protein kinase MST4##BT020099|MST4|51765|serine/threonine protein kinase MST4	0.0	
chrX	15705542	15705722	reg1010430.p2	3.405	+	BC014317 NM_020665	-22479	-	AK315144 NM_021804 AB193259	-85398	-	NM_001721	-180202	+	AB021660 AK291050 NM_007220	50769	+	BC113454 BC113480 NM_005089 TSC_hg19_v1_chrX_+_15808594 D49677 BC050451 BC065719 AK309673 HQ258575	102967	+	TSC_hg19_v1_chrX_-_15872876 AF251295	167244	-	BC014317|TMEM27|57393|transmembrane protein 27##NM_020665|TMEM27|57393|transmembrane protein 27##AK315144|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##NM_021804|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##AB193259|ACE2|59272|angiotensin I converting enzyme (peptidyl-dipeptidase A) 2##NM_001721|BMX|660|BMX non-receptor tyrosine kinase##AB021660|CA5B|11238|carbonic anhydrase VB, mitochondrial##AK291050|CA5B|11238|carbonic anhydrase VB, mitochondrial##NM_007220|CA5B|11238|carbonic anhydrase VB, mitochondrial##BC113454|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC113480|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##NM_005089|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##D49677|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC050451|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##BC065719|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AK309673|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##HQ258575|ZRSR2|8233|zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2##AF251295|AP1S2|8905|adaptor-related protein complex 1, sigma 2 subunit	0.0	
chrY	1606231	1606411	reg1025808.p1	3.405	+	BC043610 GQ280263 NM_178129 AK126147	-283	-	AK301844 NM_001173473	-83670	-	CU678006 BC010089 BC002508 AK001090 AK297805 AK225770 AK299231 AK090498 NM_001173474 NM_004192	-84520	-	BC016935 NM_005088 BC110496 BC110497 AK308367 M99578 L03426 BC028151 BC015800	54208	+	NM_004043 U11090	58026	+	AK314922 NM_001171038 U11091 M83779 NM_001171039 BC001620	77682	+	BC043610|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##GQ280263|CRLF2|64109|cytokine receptor-like factor 2##NM_178129|P2RY8|286530|purinergic receptor P2Y, G-protein coupled, 8##AK301844|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173473|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC010089|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC002508|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK001090|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK297805|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK225770|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK299231|ASMTL|8623|acetylserotonin O-methyltransferase-like##AK090498|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_001173474|ASMTL|8623|acetylserotonin O-methyltransferase-like##NM_004192|ASMTL|8623|acetylserotonin O-methyltransferase-like##BC016935|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_005088|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110496|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC110497|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##AK308367|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##M99578|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##L03426|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC028151|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##BC015800|AKAP17A|8227|A kinase (PRKA) anchor protein 17A##NM_004043|ASMT|438|acetylserotonin O-methyltransferase##U11090|ASMT|438|acetylserotonin O-methyltransferase##AK314922|ASMT|438|acetylserotonin O-methyltransferase##NM_001171038|ASMT|438|acetylserotonin O-methyltransferase##U11091|ASMT|438|acetylserotonin O-methyltransferase##M83779|ASMT|438|acetylserotonin O-methyltransferase##NM_001171039|ASMT|438|acetylserotonin O-methyltransferase##BC001620|ASMT|438|acetylserotonin O-methyltransferase	0.0	
chr16	26696519	26696585	reg1044906.p2	3.404	+	AF105378 NM_006040	-993206	+	TSC_hg19_v1_chr16_-_25269141 AK303472	-1427347	-	BX648785 AK131342 NM_001012981 AK302399	-1427693	-	NM_001145545 BC031257 AK311574	381695	+	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	518275	+	AK297166 NM_001145348	518743	+	AF105378|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##NM_006040|HS3ST4|9951|heparan sulfate (glucosamine) 3-O-sulfotransferase 4##AK303472|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##BX648785|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK131342|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001012981|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##AK302399|ZKSCAN2|342357|zinc finger with KRAB and SCAN domains 2##NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5	0.0	
chr17	47773536	47773716	reg1004736.p3	3.404	+	TSC_hg19_v1_chr17_-_47755471 BC003385 AK222589 AK312691 AJ000644 AK303268 AK316366 BC001269 AK293587 AK300616 NM_001007226 NM_001007227 NM_001007228 NM_001007229 NM_001007230 NM_003563	-18194	-	TSC_hg19_v1_chr17_+_47653475 BC022541 AK308928 AY358526 AB385434	-120099	+	TSC_hg19_v1_chr17_+_47653192 AL834282 NM_007225	-120390	+	AK098056 CU680094 DQ893425 EU176812 TSC_hg19_v1_chr17_-_47785254	11567	-	TSC_hg19_v1_chr17_-_47785283 AK296073 D87989 NM_005827 BC011888 AK293563	11672	-	BX641166 TSC_hg19_v1_chr17_-_47785555	11924	-	BC003385|SPOP|8405|speckle-type POZ protein##AK222589|SPOP|8405|speckle-type POZ protein##AK312691|SPOP|8405|speckle-type POZ protein##AJ000644|SPOP|8405|speckle-type POZ protein##AK303268|SPOP|8405|speckle-type POZ protein##AK316366|SPOP|8405|speckle-type POZ protein##BC001269|SPOP|8405|speckle-type POZ protein##AK293587|SPOP|8405|speckle-type POZ protein##AK300616|SPOP|8405|speckle-type POZ protein##NM_001007226|SPOP|8405|speckle-type POZ protein##NM_001007227|SPOP|8405|speckle-type POZ protein##NM_001007228|SPOP|8405|speckle-type POZ protein##NM_001007229|SPOP|8405|speckle-type POZ protein##NM_001007230|SPOP|8405|speckle-type POZ protein##NM_003563|SPOP|8405|speckle-type POZ protein##BC022541|NXPH3|11248|neurexophilin 3##AK308928|NXPH3|11248|neurexophilin 3##AY358526|NXPH3|11248|neurexophilin 3##AL834282|NXPH3|11248|neurexophilin 3##NM_007225|NXPH3|11248|neurexophilin 3##AK098056|SLC35B1|10237|solute carrier family 35, member B1##DQ893425|SLC35B1|10237|solute carrier family 35, member B1##EU176812|SLC35B1|10237|solute carrier family 35, member B1##AK296073|SLC35B1|10237|solute carrier family 35, member B1##D87989|SLC35B1|10237|solute carrier family 35, member B1##NM_005827|SLC35B1|10237|solute carrier family 35, member B1##BC011888|SLC35B1|10237|solute carrier family 35, member B1##AK293563|SLC35B1|10237|solute carrier family 35, member B1##BX641166|SLC35B1|10237|solute carrier family 35, member B1	0.0	
chr19	13541670	13541850	reg1001628.p1	3.404	+	TSC_hg19_v1_chr19_+_13264358 BC003625 M62831 AB464589 DQ892292 DQ895492 BT019466 CR450352	-277580	+	TSC_hg19_v1_chr19_+_13261272 BC072432 NM_004907	-280468	+	TSC_hg19_v1_chr19_-_13261100 BC017237	-280621	-	AB035727 FJ040507 TSC_hg19_v1_chr19_-_13617280 AB035726 U79666 AF004883 AF004884 NM_000068 NM_001127221 NM_001127222 NM_001174080 NM_023035 X99897	75416	-	TSC_hg19_v1_chr19_+_13842573 AK293927 BC047520	300819	+	TSC_hg19_v1_chr19_+_13858736 AK098262 AF250306 BC002905 NM_030818	316959	+	BC003625|IER2|9592|immediate early response 2##M62831|IER2|9592|immediate early response 2##DQ892292|IER2|9592|immediate early response 2##DQ895492|IER2|9592|immediate early response 2##BT019466|IER2|9592|immediate early response 2##CR450352|IER2|9592|immediate early response 2##BC072432|IER2|9592|immediate early response 2##NM_004907|IER2|9592|immediate early response 2##BC017237|STX10|8677|syntaxin 10##AB035727|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##FJ040507|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AB035726|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##U79666|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004883|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AF004884|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_000068|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127221|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001127222|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_001174080|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##NM_023035|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##X99897|CACNA1A|773|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit##AK293927|CCDC130|81576|coiled-coil domain containing 130##AK098262|CCDC130|81576|coiled-coil domain containing 130##AF250306|CCDC130|81576|coiled-coil domain containing 130##BC002905|CCDC130|81576|coiled-coil domain containing 130##NM_030818|CCDC130|81576|coiled-coil domain containing 130	0.0	
chr20	57607813	57607956	reg1029710.p2	3.404	+	BT007293 TSC_hg19_v1_chr20_-_57607361 BC003671 BC001690 AK315493 AK026556 AF077045 AF052955 BC105811 NM_006886	-521	-	AJ292757 NM_030773	-13576	+	TSC_hg19_v1_chr20_-_57582305 AK314931 NM_001336	-25579	-	TSC_hg19_v1_chr20_-_57617873 AK314449 AK002157 BC010649 BC013969 AF151865 AK298135 NM_016045	9984	-	NM_178457	158190	+	BC008876 TSC_hg19_v1_chr20_+_57875490 BC053866 NM_000114 NM_207032 NM_207033 NM_207034	267605	+	BT007293|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC003671|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC001690|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK315493|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AK026556|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF077045|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AF052955|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##BC105811|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##NM_006886|ATP5E|514|ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit##AJ292757|TUBB1|81027|tubulin, beta 1 class VI##NM_030773|TUBB1|81027|tubulin, beta 1 class VI##AK314931|CTSZ|1522|cathepsin Z##NM_001336|CTSZ|1522|cathepsin Z##AK314449|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK002157|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC010649|SLMO2|51012|slowmo homolog 2 (Drosophila)##BC013969|SLMO2|51012|slowmo homolog 2 (Drosophila)##AF151865|SLMO2|51012|slowmo homolog 2 (Drosophila)##AK298135|SLMO2|51012|slowmo homolog 2 (Drosophila)##NM_016045|SLMO2|51012|slowmo homolog 2 (Drosophila)##NM_178457|ZNF831|128611|zinc finger protein 831##BC008876|EDN3|1908|endothelin 3##BC053866|EDN3|1908|endothelin 3##NM_000114|EDN3|1908|endothelin 3##NM_207032|EDN3|1908|endothelin 3##NM_207033|EDN3|1908|endothelin 3##NM_207034|EDN3|1908|endothelin 3	0.0	
chr3	52035908	52036088	reg1001452.p2	3.404	+	BC008926 NM_000992 TSC_hg19_v1_chr3_-_52029968	-6035	-	TSC_hg19_v1_chr3_-_52029912 BC070190 AK289538 AK311884 D28412	-6085	-	TSC_hg19_v1_chr3_-_52029890 BC071663 U49083 U10248 Z49148 BC071909 BC070481	-6117	-	X93921 TSC_hg19_v1_chr3_-_52090192 BC019107 AF508727 BC104880 BC104882 NM_001947	54277	-	TSC_hg19_v1_chr3_-_52188413 BC119692 AK075289 BC119693 AK315688	152432	-	BC110877 NM_001161580 NM_001161581 NM_015426	152707	-	BC008926|RPL29|6159|ribosomal protein L29##NM_000992|RPL29|6159|ribosomal protein L29##BC070190|RPL29|6159|ribosomal protein L29##AK289538|RPL29|6159|ribosomal protein L29##AK311884|RPL29|6159|ribosomal protein L29##D28412|RPL29|6159|ribosomal protein L29##BC071663|RPL29|6159|ribosomal protein L29##U49083|RPL29|6159|ribosomal protein L29##U10248|RPL29|6159|ribosomal protein L29##Z49148|RPL29|6159|ribosomal protein L29##BC071909|RPL29|6159|ribosomal protein L29##BC070481|RPL29|6159|ribosomal protein L29##X93921|DUSP7|1849|dual specificity phosphatase 7##BC019107|DUSP7|1849|dual specificity phosphatase 7##AF508727|DUSP7|1849|dual specificity phosphatase 7##BC104880|DUSP7|1849|dual specificity phosphatase 7##BC104882|DUSP7|1849|dual specificity phosphatase 7##NM_001947|DUSP7|1849|dual specificity phosphatase 7##BC119692|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK075289|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC119693|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##AK315688|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##BC110877|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161580|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_001161581|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)##NM_015426|POC1A|25886|POC1 centriolar protein homolog A (Chlamydomonas)	0.0	
chr5	174891786	174891918	reg1040378.p2	3.404	+	NM_000794	-20690	-	TSC_hg19_v1_chr5_+_174151624 NM_002449 D31771 D89377 S75361 D26145 BC015509 X69295 AB590246 DQ891600 DQ894795 BT009814	-740240	+	TSC_hg19_v1_chr5_+_173472748 AF113537 AF123767 AF133422	-1419100	+	NM_022754 TSC_hg19_v1_chr5_+_174905562 BC063241 BX648188 AK056915 AF327346	13710	+	TSC_hg19_v1_chr5_+_175085022 BC054510 NM_001131055	193186	+	TSC_hg19_v1_chr5_+_175085101 AB023487	193259	+	NM_000794|DRD1|1812|dopamine receptor D1##NM_002449|MSX2|4488|msh homeobox 2##D31771|MSX2|4488|msh homeobox 2##D89377|MSX2|4488|msh homeobox 2##S75361|MSX2|4488|msh homeobox 2##D26145|MSX2|4488|msh homeobox 2##BC015509|MSX2|4488|msh homeobox 2##X69295|MSX2|4488|msh homeobox 2##DQ891600|MSX2|4488|msh homeobox 2##DQ894795|MSX2|4488|msh homeobox 2##BT009814|MSX2|4488|msh homeobox 2##AF113537|HMP19|51617|HMP19 protein##AF123767|HMP19|51617|HMP19 protein##AF133422|HMP19|51617|HMP19 protein##NM_022754|SFXN1|94081|sideroflexin 1##BC063241|SFXN1|94081|sideroflexin 1##BX648188|SFXN1|94081|sideroflexin 1##AK056915|SFXN1|94081|sideroflexin 1##AF327346|SFXN1|94081|sideroflexin 1##BC054510|HRH2|3274|histamine receptor H2##NM_001131055|HRH2|3274|histamine receptor H2##AB023487|HRH2|3274|histamine receptor H2	0.0	
chr6	20564733	20564834	reg1023694.p2	3.404	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-30060	+	CR749285 NM_001243076	-160750	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-162680	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	1029589	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	1101876	+	BC015850 NM_000948	1732946	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.0	
chr7	28637992	28638077	reg1043264.p1	3.404	+	AK292916 TSC_hg19_v1_chr7_+_28530784	-107269	+	L05911 NM_004904	-162801	+	L05515 NM_182898	-185891	+	L05912 AK300455 BC059400 NM_001011666 AK316187 AK298121 AB209262	87649	+	CU690330 TSC_hg19_v1_chr7_-_28997732	359663	-	AB014544 TSC_hg19_v1_chr7_-_28997924 BC036337	359895	-	AK292916|CREB5|9586|cAMP responsive element binding protein 5##L05911|CREB5|9586|cAMP responsive element binding protein 5##NM_004904|CREB5|9586|cAMP responsive element binding protein 5##L05515|CREB5|9586|cAMP responsive element binding protein 5##NM_182898|CREB5|9586|cAMP responsive element binding protein 5##L05912|CREB5|9586|cAMP responsive element binding protein 5##AK300455|CREB5|9586|cAMP responsive element binding protein 5##BC059400|CREB5|9586|cAMP responsive element binding protein 5##NM_001011666|CREB5|9586|cAMP responsive element binding protein 5##AK316187|CREB5|9586|cAMP responsive element binding protein 5##AB209262|CREB5|9586|cAMP responsive element binding protein 5##AB014544|TRIL|9865|TLR4 interactor with leucine-rich repeats##BC036337|TRIL|9865|TLR4 interactor with leucine-rich repeats	0.0	
chr7	99819726	99819811	reg1026293.p2	3.404	+	NM_024070	-2898	+	TSC_hg19_v1_chr7_+_99775540 NM_012447 AK292394 BC146806 AK302693 BC047490 BC028684 AL833816 BC140932	-44205	+	AJ007798 TSC_hg19_v1_chr7_+_99775380	-44404	+	BC065200 AK290510 TSC_hg19_v1_chr7_-_99869856 BC044886 BC090867 BC033723 BC053367 NM_178831	50062	-	BC056606 NM_001004351	85556	+	AB103084 TSC_hg19_v1_chr7_-_99933502 BC038996 D38435 D38499 BC110395 BC044214 BC067809	113773	-	NM_024070|PVRIG|79037|poliovirus receptor related immunoglobulin domain containing##NM_012447|STAG3|10734|stromal antigen 3##AK292394|STAG3|10734|stromal antigen 3##BC146806|STAG3|10734|stromal antigen 3##AK302693|STAG3|10734|stromal antigen 3##BC047490|STAG3|10734|stromal antigen 3##BC028684|STAG3|10734|stromal antigen 3##AL833816|STAG3|10734|stromal antigen 3##BC140932|STAG3|10734|stromal antigen 3##AJ007798|STAG3|10734|stromal antigen 3##BC065200|GATS|352954|GATS, stromal antigen 3 opposite strand##AK290510|GATS|352954|GATS, stromal antigen 3 opposite strand##BC044886|GATS|352954|GATS, stromal antigen 3 opposite strand##BC090867|GATS|352954|GATS, stromal antigen 3 opposite strand##BC033723|GATS|352954|GATS, stromal antigen 3 opposite strand##BC053367|GATS|352954|GATS, stromal antigen 3 opposite strand##NM_178831|GATS|352954|GATS, stromal antigen 3 opposite strand##BC056606|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)##NM_001004351|SPDYE3|441272|speedy homolog E3 (Xenopus laevis)##BC038996|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38435|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##D38499|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC110395|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC044214|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1##BC067809|PMS2P1|5379|postmeiotic segregation increased 2 pseudogene 1	0.037903	
chr1	119259560	119259636	reg1041594.p1	3.403	+	AB527095 AK091816 AX747199 AY555274 BX648110 NM_206996	-531785	-	TSC_hg19_v1_chr1_+_118472364 NM_006784 AK292438 AF083217 BC128385 BC128454 BC148244	-787220	+	BC058836 TSC_hg19_v1_chr1_+_118472357	-787245	+	AK127536 NM_152380	272580	-	TSC_hg19_v1_chr1_+_119683039 BC063600 BC043601	423428	+	TSC_hg19_v1_chr1_-_119683274 BC021722 CU692202 BC039889 AK223197 AJ242739 AK296799 BC044575 AK313740 AK300295 NM_015836 NM_201263	423671	-	AK091816|SPAG17|200162|sperm associated antigen 17##AY555274|SPAG17|200162|sperm associated antigen 17##BX648110|SPAG17|200162|sperm associated antigen 17##NM_206996|SPAG17|200162|sperm associated antigen 17##NM_006784|WDR3|10885|WD repeat domain 3##AK292438|WDR3|10885|WD repeat domain 3##AF083217|WDR3|10885|WD repeat domain 3##BC058836|WDR3|10885|WD repeat domain 3##AK127536|TBX15|6913|T-box 15##NM_152380|TBX15|6913|T-box 15##BC021722|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC039889|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK223197|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AJ242739|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK296799|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##BC044575|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK313740|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##AK300295|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_015836|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial##NM_201263|WARS2|10352|tryptophanyl tRNA synthetase 2, mitochondrial	0.982959	CTCF.p2:2:0.983
chr1	15738204	15738326	reg1036411.p1	3.403	+	BC068473 TSC_hg19_v1_chr1_+_15736425 BC007233 BC014923 BC023611	-1830	+	TSC_hg19_v1_chr1_+_15736390 NM_024329	-1865	+	AK057963 NM_052929	-164498	+	BC015118 CR749296 NM_007272 AK289447 BC059779 S82198	26682	+	NM_033440 BC007031 BC069331 BC069432 M16652 AK312198 M16631 D00236 CR450291	44970	+	BC069412 BC069455 M16653 NM_015849 BC113540 BC113542 BC171735 HQ258147	64340	+	BC068473|EFHD2|79180|EF-hand domain family, member D2##BC007233|EFHD2|79180|EF-hand domain family, member D2##BC014923|EFHD2|79180|EF-hand domain family, member D2##BC023611|EFHD2|79180|EF-hand domain family, member D2##NM_024329|EFHD2|79180|EF-hand domain family, member D2##AK057963|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##NM_052929|FHAD1|114827|forkhead-associated (FHA) phosphopeptide binding domain 1##BC015118|CTRC|11330|chymotrypsin C (caldecrin)##CR749296|CTRC|11330|chymotrypsin C (caldecrin)##NM_007272|CTRC|11330|chymotrypsin C (caldecrin)##AK289447|CTRC|11330|chymotrypsin C (caldecrin)##BC059779|CTRC|11330|chymotrypsin C (caldecrin)##S82198|CTRC|11330|chymotrypsin C (caldecrin)##NM_033440|CELA2A|63036|chymotrypsin-like elastase family, member 2A##BC007031|CELA2A|63036|chymotrypsin-like elastase family, member 2A##BC069331|CELA2A|63036|chymotrypsin-like elastase family, member 2A##BC069432|CELA2A|63036|chymotrypsin-like elastase family, member 2A##M16652|CELA2A|63036|chymotrypsin-like elastase family, member 2A##AK312198|CELA2A|63036|chymotrypsin-like elastase family, member 2A##M16631|CELA2A|63036|chymotrypsin-like elastase family, member 2A##D00236|CELA2A|63036|chymotrypsin-like elastase family, member 2A##CR450291|CELA2A|63036|chymotrypsin-like elastase family, member 2A##BC069412|CELA2B|51032|chymotrypsin-like elastase family, member 2B##BC069455|CELA2B|51032|chymotrypsin-like elastase family, member 2B##M16653|CELA2B|51032|chymotrypsin-like elastase family, member 2B##NM_015849|CELA2B|51032|chymotrypsin-like elastase family, member 2B##BC113540|CELA2B|51032|chymotrypsin-like elastase family, member 2B##BC113542|CELA2B|51032|chymotrypsin-like elastase family, member 2B##BC171735|CELA2B|51032|chymotrypsin-like elastase family, member 2B##HQ258147|CELA2B|51032|chymotrypsin-like elastase family, member 2B	0.0	
chr11	67458770	67458877	reg1041168.p2	3.403	+	TSC_hg19_v1_chr11_-_67450557 AB055770	-8277	-	BC007685 NM_001031615	-10139	-	TSC_hg19_v1_chr11_-_67442086 AK309277 NM_000695 AK092464	-16692	-	TSC_hg19_v1_chr11_-_67572800 BC063712 BC110365	113929	-	TSC_hg19_v1_chr11_-_67771527 BC101568 BC105104 BC025669 AJ422142 AJ271326 BC092472 BC033623 NM_030930	312744	-	TSC_hg19_v1_chr11_+_67776039 EF411198 NM_001161473	317208	+	AB055770|RPL37|6167|ribosomal protein L37##BC007685|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_001031615|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK309277|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##NM_000695|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##AK092464|ALDH3B2|222|aldehyde dehydrogenase 3 family, member B2##BC063712|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC110365|FAM86C2P|645332|family with sequence similarity 86, member A pseudogene##BC101568|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC105104|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC025669|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ422142|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##AJ271326|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC092472|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##BC033623|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##NM_030930|UNC93B1|81622|unc-93 homolog B1 (C. elegans)##EF411198|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1##NM_001161473|ALDH3B1|221|aldehyde dehydrogenase 3 family, member B1	0.32249	CTCF.p2:-6:0.322
chr1	31896315	31896495	reg1006707.p2	3.403	+	AK093784 AK316357 AX748305 NM_001199039 NM_018565 AK296118	-9718	+	AY094595 NM_178865 TSC_hg19_v1_chr1_+_31886059 AK309409 AK308031 AY358560 BC063006 BC084580 BC126283 BC126285 GQ129287 GQ129288 HQ258415	-10339	+	NM_001199037 AK298512	-13372	+	NM_001204414 NM_022164 TSC_hg19_v1_chr1_+_32042115 AK292770 AK075398 AK296322 AK298382	145698	+	TSC_hg19_v1_chr1_+_32042122 AY358421	145717	+	TSC_hg19_v1_chr1_+_32042144 BC064633 AB050716 AK298038 AF236150 AF205436	145737	+	AK093784|SERINC2|347735|serine incorporator 2##AK316357|SERINC2|347735|serine incorporator 2##NM_001199039|SERINC2|347735|serine incorporator 2##NM_018565|SERINC2|347735|serine incorporator 2##AK296118|SERINC2|347735|serine incorporator 2##AY094595|SERINC2|347735|serine incorporator 2##NM_178865|SERINC2|347735|serine incorporator 2##AK309409|SERINC2|347735|serine incorporator 2##AK308031|SERINC2|347735|serine incorporator 2##AY358560|SERINC2|347735|serine incorporator 2##BC063006|SERINC2|347735|serine incorporator 2##BC084580|SERINC2|347735|serine incorporator 2##BC126283|SERINC2|347735|serine incorporator 2##BC126285|SERINC2|347735|serine incorporator 2##GQ129287|SERINC2|347735|serine incorporator 2##GQ129288|SERINC2|347735|serine incorporator 2##HQ258415|SERINC2|347735|serine incorporator 2##NM_001199037|SERINC2|347735|serine incorporator 2##AK298512|SERINC2|347735|serine incorporator 2##NM_001204414|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##NM_022164|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK292770|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK075398|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK296322|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298382|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AY358421|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##BC064633|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AB050716|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AK298038|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF236150|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1##AF205436|TINAGL1|64129|tubulointerstitial nephritis antigen-like 1	0.0	
chr17	3668837	3668967	reg1039038.p1	3.403	+	TSC_hg19_v1_chr17_+_3627210 AK310546 AK315247 BC036181 NM_031965 AK056691 AB039834 AF289865 BC050662 AK292715 BC016626 BC047457	-41686	+	TSC_hg19_v1_chr17_-_3627077 AF289864	-41800	-	AB209623 BC016917 AK307959 TSC_hg19_v1_chr17_-_3599535 BC008319 AK290889 NM_001204519 NM_001204520 NM_002561 NM_175080	-69310	-	HQ258689 TSC_hg19_v1_chr17_-_3704463	35551	-	TSC_hg19_v1_chr17_-_3704490 BC113436 BC117207 NM_002208	35609	-	TSC_hg19_v1_chr17_-_3749541 NM_001114118 NM_018553	80608	-	BC036181|GSG2|83903|germ cell associated 2 (haspin)##NM_031965|GSG2|83903|germ cell associated 2 (haspin)##AK056691|GSG2|83903|germ cell associated 2 (haspin)##AB039834|GSG2|83903|germ cell associated 2 (haspin)##AF289865|GSG2|83903|germ cell associated 2 (haspin)##BC050662|GSG2|83903|germ cell associated 2 (haspin)##AK292715|GSG2|83903|germ cell associated 2 (haspin)##BC016626|GSG2|83903|germ cell associated 2 (haspin)##BC047457|GSG2|83903|germ cell associated 2 (haspin)##AF289864|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##AB209623|P2RX5-TAX1BP3|100533970|P2RX5-TAX1BP3 readthrough##BC016917|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK307959|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##BC008319|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##AK290889|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204519|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_001204520|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_002561|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##NM_175080|P2RX5|5026|purinergic receptor P2X, ligand-gated ion channel, 5##HQ258689|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC113436|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##BC117207|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_002208|ITGAE|3682|integrin, alpha E (antigen CD103, human mucosal lymphocyte antigen 1; alpha polypeptide)##NM_001114118|C17orf85|55421|chromosome 17 open reading frame 85##NM_018553|C17orf85|55421|chromosome 17 open reading frame 85	0.0	
chr17	49197180	49197329	reg1039168.p2	3.403	+	TSC_hg19_v1_chr17_-_49124138 BC007524 BC059946 AK299553 AK307793 AK295098 AK309214 AK024068 NM_001251971	-73026	-	AK313904 NM_001243877	-251916	-	TSC_hg19_v1_chr17_-_48943716 BC070493 BC098415 NM_001243885 NM_005749	-253558	-	TSC_hg19_v1_chr17_-_49198227 AF327452 BC106048 AK302789 AY850123 AB011088 BC146755 BC153878 AK091921 AX747254 NM_001130527 NM_001130528 NM_003971	901	-	NM_001018136 TSC_hg19_v1_chr17_+_49230927 AK291105 NM_000269 NM_198175	33657	+	TSC_hg19_v1_chr17_+_49230932 AL360191 AF487339	33678	+	BC007524|SPAG9|9043|sperm associated antigen 9##BC059946|SPAG9|9043|sperm associated antigen 9##AK299553|SPAG9|9043|sperm associated antigen 9##AK307793|SPAG9|9043|sperm associated antigen 9##AK295098|SPAG9|9043|sperm associated antigen 9##AK309214|SPAG9|9043|sperm associated antigen 9##AK024068|SPAG9|9043|sperm associated antigen 9##NM_001251971|SPAG9|9043|sperm associated antigen 9##AK313904|TOB1|10140|transducer of ERBB2, 1##NM_001243877|TOB1|10140|transducer of ERBB2, 1##BC070493|TOB1|10140|transducer of ERBB2, 1##BC098415|TOB1|10140|transducer of ERBB2, 1##NM_001243885|TOB1|10140|transducer of ERBB2, 1##NM_005749|TOB1|10140|transducer of ERBB2, 1##AF327452|SPAG9|9043|sperm associated antigen 9##AK302789|SPAG9|9043|sperm associated antigen 9##AY850123|SPAG9|9043|sperm associated antigen 9##AB011088|SPAG9|9043|sperm associated antigen 9##BC146755|SPAG9|9043|sperm associated antigen 9##BC153878|SPAG9|9043|sperm associated antigen 9##AK091921|SPAG9|9043|sperm associated antigen 9##NM_001130527|SPAG9|9043|sperm associated antigen 9##NM_001130528|SPAG9|9043|sperm associated antigen 9##NM_003971|SPAG9|9043|sperm associated antigen 9##NM_001018136|NME1-NME2|654364|NME1-NME2 readthrough##AK291105|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_000269|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##NM_198175|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##AL360191|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in##AF487339|NME1|4830|non-metastatic cells 1, protein (NM23A) expressed in	0.0	
chr19	12899730	12899807	reg1035596.p2	3.403	+	TSC_hg19_v1_chr19_-_12886422 NM_001100176 NM_013312	-13341	-	CU680326 DQ891339 DQ893360 DQ894521 DQ896679 AB527820 TSC_hg19_v1_chr19_-_12886342 AF044924 BC012443	-13441	-	AF440756 AY515705 NM_017682 AK000139 AK225232	-36330	+	TSC_hg19_v1_chr19_+_12902286 DQ650707	2522	+	AK222532 TSC_hg19_v1_chr19_+_12902299 AK313737 BC110372 BC004250 BC009465 BC009466 NM_002229 X51345	2545	+	BC000452 BC003022 BC064138 TSC_hg19_v1_chr19_-_12912615 Z22548 AK289485 AK293957 BC039428 AK022395 NM_005809 NM_181738	12896	-	NM_001100176|HOOK2|29911|hook homolog 2 (Drosophila)##NM_013312|HOOK2|29911|hook homolog 2 (Drosophila)##DQ891339|HOOK2|29911|hook homolog 2 (Drosophila)##DQ893360|HOOK2|29911|hook homolog 2 (Drosophila)##DQ894521|HOOK2|29911|hook homolog 2 (Drosophila)##DQ896679|HOOK2|29911|hook homolog 2 (Drosophila)##AF044924|HOOK2|29911|hook homolog 2 (Drosophila)##BC012443|HOOK2|29911|hook homolog 2 (Drosophila)##AF440756|BEST2|54831|bestrophin 2##AY515705|BEST2|54831|bestrophin 2##NM_017682|BEST2|54831|bestrophin 2##AK000139|BEST2|54831|bestrophin 2##AK225232|BEST2|54831|bestrophin 2##AK222532|JUNB|3726|jun B proto-oncogene##AK313737|JUNB|3726|jun B proto-oncogene##BC004250|JUNB|3726|jun B proto-oncogene##BC009465|JUNB|3726|jun B proto-oncogene##BC009466|JUNB|3726|jun B proto-oncogene##NM_002229|JUNB|3726|jun B proto-oncogene##X51345|JUNB|3726|jun B proto-oncogene##BC000452|PRDX2|7001|peroxiredoxin 2##BC003022|PRDX2|7001|peroxiredoxin 2##BC064138|PRDX2|7001|peroxiredoxin 2##Z22548|PRDX2|7001|peroxiredoxin 2##AK289485|PRDX2|7001|peroxiredoxin 2##AK293957|PRDX2|7001|peroxiredoxin 2##BC039428|PRDX2|7001|peroxiredoxin 2##AK022395|PRDX2|7001|peroxiredoxin 2##NM_005809|PRDX2|7001|peroxiredoxin 2##NM_181738|PRDX2|7001|peroxiredoxin 2	0.0	
chr19	16552591	16552701	reg1039888.p2	3.403	+	AF134053 TSC_hg19_v1_chr19_+_16435803	-116877	+	TSC_hg19_v1_chr19_+_16435636 AK225820 BC071983 BC035342 AF205849 NM_016270	-117005	+	AK293188 NM_001130524 NM_032493 TSC_hg19_v1_chr19_+_16308721 AK297824 BC017469 AB209808 AF290613 AB590055 DQ059565	-243896	+	BC142662 AB527825 AF110265 BC131590 BC037558 TSC_hg19_v1_chr19_-_16582771 AB015346 NM_021235 BC067114 BC051873 BC142716 AK296473 AK297428 AK024166	30130	-	TSC_hg19_v1_chr19_-_16582810 AK291359	30206	-	CU677059 AB576176 DQ890903 DQ894056 AK058084 BC014595 NM_145046	54324	-	AF134053|KLF2|10365|Kruppel-like factor 2 (lung)##AK225820|KLF2|10365|Kruppel-like factor 2 (lung)##BC071983|KLF2|10365|Kruppel-like factor 2 (lung)##BC035342|KLF2|10365|Kruppel-like factor 2 (lung)##AF205849|KLF2|10365|Kruppel-like factor 2 (lung)##NM_016270|KLF2|10365|Kruppel-like factor 2 (lung)##AK293188|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_001130524|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##NM_032493|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AK297824|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC017469|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AB209808|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##AF290613|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##DQ059565|AP1M1|8907|adaptor-related protein complex 1, mu 1 subunit##BC142662|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AF110265|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC131590|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC037558|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB015346|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##NM_021235|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC067114|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC051873|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##BC142716|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK296473|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK297428|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK024166|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AK291359|EPS15L1|58513|epidermal growth factor receptor pathway substrate 15-like 1##AB576176|CALR3|125972|calreticulin 3##DQ890903|CALR3|125972|calreticulin 3##DQ894056|CALR3|125972|calreticulin 3##AK058084|CALR3|125972|calreticulin 3##BC014595|CALR3|125972|calreticulin 3##NM_145046|CALR3|125972|calreticulin 3	0.327829	CTCF.p2:2:0.328
chr19	2087629	2087809	reg1029228.p2	3.403	+	AB061793 TSC_hg19_v1_chr19_-_2085247 BC015049	-2476	-	BC073140 TSC_hg19_v1_chr19_-_2051243 NM_017572 NM_199054	-36486	-	AL137565 TSC_hg19_v1_chr19_-_2046250	-41478	-	TSC_hg19_v1_chr19_-_2096266 AK095471 CR627409 NM_130807	8546	-	TSC_hg19_v1_chr19_-_2096297 AL832474	8575	-	TSC_hg19_v1_chr19_+_2096913 AY358444 NM_001031735 NM_001039846 DQ196309 DQ196310 AK301957 AY753639 BC014609 BC040964 BC010443	9141	+	AB061793|MOB3A|126308|MOB kinase activator 3A##BC015049|MOB3A|126308|MOB kinase activator 3A##BC073140|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_017572|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##NM_199054|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AL137565|MKNK2|2872|MAP kinase interacting serine/threonine kinase 2##AK095471|MOB3A|126308|MOB kinase activator 3A##CR627409|MOB3A|126308|MOB kinase activator 3A##NM_130807|MOB3A|126308|MOB kinase activator 3A##AL832474|MOB3A|126308|MOB kinase activator 3A##AY358444|IZUMO4|113177|IZUMO family member 4##NM_001031735|IZUMO4|113177|IZUMO family member 4##NM_001039846|IZUMO4|113177|IZUMO family member 4##DQ196309|IZUMO4|113177|IZUMO family member 4##DQ196310|IZUMO4|113177|IZUMO family member 4##AK301957|IZUMO4|113177|IZUMO family member 4##AY753639|IZUMO4|113177|IZUMO family member 4##BC014609|IZUMO4|113177|IZUMO family member 4##BC040964|IZUMO4|113177|IZUMO family member 4##BC010443|IZUMO4|113177|IZUMO family member 4	0.0	
chr20	1562269	1562355	reg1038239.p2	3.403	+	DQ891297 EU176577 BC033502 NM_178460	-23990	-	AK097113 TSC_hg19_v1_chr20_-_1472172 NM_001122962 NM_001134836	-90112	-	AK297072 TSC_hg19_v1_chr20_-_1472142	-90178	-	AB590891 CU692960 BC131747 Y10376 BC025286 BC075835 TSC_hg19_v1_chr20_-_1600656 AK289866 AK313517 BX537992 NM_001083910 NM_001135844 NM_006065	38326	-	AY748247 AY748248 CU687894 BC064532 BC020629 AK292745 NM_001039508 NM_018556 NM_080816	76079	-	TSC_hg19_v1_chr20_+_1874780 NM_001040022	312484	+	DQ891297|SIRPD|128646|signal-regulatory protein delta##EU176577|SIRPD|128646|signal-regulatory protein delta##BC033502|SIRPD|128646|signal-regulatory protein delta##NM_178460|SIRPD|128646|signal-regulatory protein delta##NM_001122962|SIRPB2|284759|signal-regulatory protein beta 2##NM_001134836|SIRPB2|284759|signal-regulatory protein beta 2##AK297072|SIRPB2|284759|signal-regulatory protein beta 2##BC131747|SIRPB1|10326|signal-regulatory protein beta 1##Y10376|SIRPB1|10326|signal-regulatory protein beta 1##BC025286|SIRPB1|10326|signal-regulatory protein beta 1##BC075835|SIRPB1|10326|signal-regulatory protein beta 1##AK289866|SIRPB1|10326|signal-regulatory protein beta 1##BX537992|SIRPB1|10326|signal-regulatory protein beta 1##NM_001083910|SIRPB1|10326|signal-regulatory protein beta 1##NM_001135844|SIRPB1|10326|signal-regulatory protein beta 1##NM_006065|SIRPB1|10326|signal-regulatory protein beta 1##AY748247|SIRPG|55423|signal-regulatory protein gamma##AY748248|SIRPG|55423|signal-regulatory protein gamma##BC064532|SIRPG|55423|signal-regulatory protein gamma##BC020629|SIRPG|55423|signal-regulatory protein gamma##AK292745|SIRPG|55423|signal-regulatory protein gamma##NM_001039508|SIRPG|55423|signal-regulatory protein gamma##NM_018556|SIRPG|55423|signal-regulatory protein gamma##NM_080816|SIRPG|55423|signal-regulatory protein gamma##NM_001040022|SIRPA|140885|signal-regulatory protein alpha	0.253024	CTCF.p2:0:0.253
chr2	58136196	58136273	reg1033422.p2	3.403	+	AK311113 TSC_hg19_v1_chr2_-_56412914	-1723325	-	AB384323 TSC_hg19_v1_chr2_+_56411776	-1724468	+	TSC_hg19_v1_chr2_+_56411123 AK311739 AB067499 NM_001080433 BC131557	-1725029	+	AK295193 TSC_hg19_v1_chr2_+_58273765 NM_001130480 NM_001130482 NM_001130483 AK296611 NM_006296 BC027854 AB000450 AJ512204 AY228367 AY228368 AY228370 AY228371 AY228372 NM_001130481 AY228369	137520	+	TSC_hg19_v1_chr2_+_58273948 AK058199 AK223540 BC021663	137754	+	CU691100 TSC_hg19_v1_chr2_-_58468461 AK225147 BC037570 AK001197 BC009042 BC041627 AK297736 BC054517 AK309671 NM_001114636 NM_018062	332248	-	AK311113|LOC100129434|100129434|uncharacterized LOC100129434##AB067499|CCDC85A|114800|coiled-coil domain containing 85A##NM_001080433|CCDC85A|114800|coiled-coil domain containing 85A##BC131557|CCDC85A|114800|coiled-coil domain containing 85A##AK295193|VRK2|7444|vaccinia related kinase 2##NM_001130480|VRK2|7444|vaccinia related kinase 2##NM_001130482|VRK2|7444|vaccinia related kinase 2##NM_001130483|VRK2|7444|vaccinia related kinase 2##AK296611|VRK2|7444|vaccinia related kinase 2##NM_006296|VRK2|7444|vaccinia related kinase 2##BC027854|VRK2|7444|vaccinia related kinase 2##AB000450|VRK2|7444|vaccinia related kinase 2##AJ512204|VRK2|7444|vaccinia related kinase 2##AY228367|VRK2|7444|vaccinia related kinase 2##AY228368|VRK2|7444|vaccinia related kinase 2##AY228370|VRK2|7444|vaccinia related kinase 2##AY228371|VRK2|7444|vaccinia related kinase 2##AY228372|VRK2|7444|vaccinia related kinase 2##NM_001130481|VRK2|7444|vaccinia related kinase 2##AY228369|VRK2|7444|vaccinia related kinase 2##AK058199|VRK2|7444|vaccinia related kinase 2##AK223540|VRK2|7444|vaccinia related kinase 2##BC021663|VRK2|7444|vaccinia related kinase 2##AK225147|FANCL|55120|Fanconi anemia, complementation group L##BC037570|FANCL|55120|Fanconi anemia, complementation group L##AK001197|FANCL|55120|Fanconi anemia, complementation group L##BC009042|FANCL|55120|Fanconi anemia, complementation group L##BC041627|FANCL|55120|Fanconi anemia, complementation group L##AK297736|FANCL|55120|Fanconi anemia, complementation group L##BC054517|FANCL|55120|Fanconi anemia, complementation group L##AK309671|FANCL|55120|Fanconi anemia, complementation group L##NM_001114636|FANCL|55120|Fanconi anemia, complementation group L##NM_018062|FANCL|55120|Fanconi anemia, complementation group L	0.0	
chr3	58284543	58284609	reg1032116.p1	3.403	+	TSC_hg19_v1_chr3_+_58223518 AF225418 AK122983 BC001698	-61046	+	TSC_hg19_v1_chr3_+_58223264 NM_020676 AK225942 AK172797 AK313168	-61293	+	NM_004944	-84179	-	TSC_hg19_v1_chr3_+_58291985 NM_001098783 NM_007042	7394	+	TSC_hg19_v1_chr3_+_58292000 AF001175	7424	+	TSC_hg19_v1_chr3_+_58292022 BC012017 BC002441 BC007342	7441	+	AF225418|ABHD6|57406|abhydrolase domain containing 6##AK122983|ABHD6|57406|abhydrolase domain containing 6##BC001698|ABHD6|57406|abhydrolase domain containing 6##NM_020676|ABHD6|57406|abhydrolase domain containing 6##AK225942|ABHD6|57406|abhydrolase domain containing 6##AK172797|ABHD6|57406|abhydrolase domain containing 6##AK313168|ABHD6|57406|abhydrolase domain containing 6##NM_004944|DNASE1L3|1776|deoxyribonuclease I-like 3##NM_001098783|RPP14|11102|ribonuclease P/MRP 14kDa subunit##NM_007042|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AF001175|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC012017|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC002441|RPP14|11102|ribonuclease P/MRP 14kDa subunit##BC007342|RPP14|11102|ribonuclease P/MRP 14kDa subunit	0.53379	CTCF.p2:-15:0.534
chr5	122171522	122171626	reg1037491.p1	3.403	+	TSC_hg19_v1_chr5_+_122110786 AY272044 AK002170 AB464236 BT009841 DQ890933 DQ894096 AF043453	-60762	+	AK023581 TSC_hg19_v1_chr5_+_122110776 BC003382 AF065482 AK222968	-60805	+	TSC_hg19_v1_chr5_+_122110737 AK023716 NM_003100	-60830	+	NM_014035 BC010886 BC069012 TSC_hg19_v1_chr5_+_122181284 AF139461 AY358098 CU679837 CU686699 AY044655	9673	+	CU678110 TSC_hg19_v1_chr5_-_122372375 AK290321 BC002678	200790	-	TSC_hg19_v1_chr5_-_122372418 AK304053 NM_000943	200850	-	AY272044|SNX2|6643|sorting nexin 2##AK002170|SNX2|6643|sorting nexin 2##BT009841|SNX2|6643|sorting nexin 2##DQ890933|SNX2|6643|sorting nexin 2##DQ894096|SNX2|6643|sorting nexin 2##AF043453|SNX2|6643|sorting nexin 2##AK023581|SNX2|6643|sorting nexin 2##BC003382|SNX2|6643|sorting nexin 2##AF065482|SNX2|6643|sorting nexin 2##AK222968|SNX2|6643|sorting nexin 2##AK023716|SNX2|6643|sorting nexin 2##NM_003100|SNX2|6643|sorting nexin 2##NM_014035|SNX24|28966|sorting nexin 24##BC010886|SNX24|28966|sorting nexin 24##BC069012|SNX24|28966|sorting nexin 24##AF139461|SNX24|28966|sorting nexin 24##AY358098|SNX24|28966|sorting nexin 24##AY044655|SNX24|28966|sorting nexin 24##AK290321|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##BC002678|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##AK304053|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)##NM_000943|PPIC|5480|peptidylprolyl isomerase C (cyclophilin C)	0.0	
chr11	6624822	6624964	reg1033901.p1	3.402	+	TSC_hg19_v1_chr11_-_6624837 NM_015324	-29	-	D87060 AB385327 AB007869 TSC_hg19_v1_chr11_-_6624836 BC001071	-110	-	AK096944 NM_144666 NM_173589 BX648742	-106384	+	TSC_hg19_v1_chr11_+_6624983 AK293474 NM_001014794 NM_004517	58	+	TSC_hg19_v1_chr11_+_6625024 AK314843 U40282 AK296628 BC001554 AB209416 CR749220	134	+	NM_001014795	313	+	NM_015324|RRP8|23378|ribosomal RNA processing 8, methyltransferase, homolog (yeast)##D87060|RRP8|23378|ribosomal RNA processing 8, methyltransferase, homolog (yeast)##AB007869|RRP8|23378|ribosomal RNA processing 8, methyltransferase, homolog (yeast)##BC001071|RRP8|23378|ribosomal RNA processing 8, methyltransferase, homolog (yeast)##AK096944|DNHD1|144132|dynein heavy chain domain 1##NM_144666|DNHD1|144132|dynein heavy chain domain 1##NM_173589|DNHD1|144132|dynein heavy chain domain 1##BX648742|DNHD1|144132|dynein heavy chain domain 1##AK293474|ILK|3611|integrin-linked kinase##NM_001014794|ILK|3611|integrin-linked kinase##NM_004517|ILK|3611|integrin-linked kinase##AK314843|ILK|3611|integrin-linked kinase##U40282|ILK|3611|integrin-linked kinase##AK296628|ILK|3611|integrin-linked kinase##BC001554|ILK|3611|integrin-linked kinase##AB209416|ILK|3611|integrin-linked kinase##CR749220|ILK|3611|integrin-linked kinase##NM_001014795|ILK|3611|integrin-linked kinase	0.0	
chr1	46052268	46052390	reg1036652.p2	3.402	+	NM_001195193 NM_002482 NM_152298 TSC_hg19_v1_chr1_+_46049716 AK056161 AK222778 AK222816 AK291637 AK298893 AK308001 AK299584 BC010105 BC011580 AF035191 M97856 BC009933 BC053608 BC003113 BT006757 DQ893275 DQ896606	-2591	+	TSC_hg19_v1_chr1_+_46016747 AK293083 BC005394	-35597	+	TSC_hg19_v1_chr1_+_46016568 BC000670 AK307237 AK307288	-35782	+	BC128177 BC128178 BC029888 BC065201 BC110988 AK310879 AK057646 AK303939 AK298104 NM_001114938 NM_001190182	37355	-	TSC_hg19_v1_chr1_-_46152195 BC068578 NM_021639	99913	-	NM_016486 TSC_hg19_v1_chr1_+_46153865 AK024682 AK308613 BC104636 BC064539 BC013608 AF151063 BC034147 BC046130 BC121117 BC133692	101546	+	NM_001195193|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##NM_002482|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##NM_152298|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK056161|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK222778|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK222816|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK291637|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK298893|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK308001|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK299584|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC010105|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC011580|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AF035191|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##M97856|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC009933|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC053608|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BC003113|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##BT006757|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##DQ893275|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##DQ896606|NASP|4678|nuclear autoantigenic sperm protein (histone-binding)##AK293083|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##BC005394|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##BC000670|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307237|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##AK307288|AKR1A1|10327|aldo-keto reductase family 1, member A1 (aldehyde reductase)##BC128177|CCDC17|149483|coiled-coil domain containing 17##BC128178|CCDC17|149483|coiled-coil domain containing 17##BC029888|CCDC17|149483|coiled-coil domain containing 17##BC065201|CCDC17|149483|coiled-coil domain containing 17##BC110988|CCDC17|149483|coiled-coil domain containing 17##AK310879|CCDC17|149483|coiled-coil domain containing 17##AK057646|CCDC17|149483|coiled-coil domain containing 17##AK303939|CCDC17|149483|coiled-coil domain containing 17##AK298104|CCDC17|149483|coiled-coil domain containing 17##NM_001114938|CCDC17|149483|coiled-coil domain containing 17##NM_001190182|CCDC17|149483|coiled-coil domain containing 17##BC068578|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1##NM_021639|GPBP1L1|60313|GC-rich promoter binding protein 1-like 1##NM_016486|TMEM69|51249|transmembrane protein 69##AK024682|TMEM69|51249|transmembrane protein 69##BC104636|TMEM69|51249|transmembrane protein 69##BC064539|TMEM69|51249|transmembrane protein 69##BC013608|TMEM69|51249|transmembrane protein 69##AF151063|TMEM69|51249|transmembrane protein 69##BC034147|TMEM69|51249|transmembrane protein 69##BC046130|TMEM69|51249|transmembrane protein 69##BC121117|TMEM69|51249|transmembrane protein 69##BC133692|TMEM69|51249|transmembrane protein 69	0.0	
chr15	101488278	101488371	reg1032204.p1	3.402	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-28812	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-28850	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-68253	+	AB071402 TSC_hg19_v1_chr15_-_101791795	303412	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	303811	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	329339	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.0	
chr1	61804011	61804108	reg1042600.p2	3.402	+	TSC_hg19_v1_chr1_+_61548292 AB037860 NM_001134673 NM_005595 AK299356 BC022264 CU692518 DQ893250 DQ896579	-256001	+	TSC_hg19_v1_chr1_+_61547427 AK299579 NM_001145512	-256599	+	TSC_hg19_v1_chr1_+_61542928 AK299289 NM_001145511	-261123	+	TSC_hg19_v1_chr1_+_61869699 AK024964	65664	+	TSC_hg19_v1_chr1_+_61924622 AK096483	120633	+	AK311444 AK311705 TSC_hg19_v1_chr1_-_62190802 CU688668	386712	-	AB037860|NFIA|4774|nuclear factor I/A##NM_001134673|NFIA|4774|nuclear factor I/A##NM_005595|NFIA|4774|nuclear factor I/A##AK299356|NFIA|4774|nuclear factor I/A##BC022264|NFIA|4774|nuclear factor I/A##DQ893250|NFIA|4774|nuclear factor I/A##DQ896579|NFIA|4774|nuclear factor I/A##AK299579|NFIA|4774|nuclear factor I/A##NM_001145512|NFIA|4774|nuclear factor I/A##AK299289|NFIA|4774|nuclear factor I/A##NM_001145511|NFIA|4774|nuclear factor I/A##AK024964|NFIA|4774|nuclear factor I/A##AK096483|NFIA|4774|nuclear factor I/A##AK311444|TM2D1|83941|TM2 domain containing 1##AK311705|TM2D1|83941|TM2 domain containing 1	0.0	
chr19	34761226	34761343	reg1040367.p2	3.402	+	TSC_hg19_v1_chr19_+_34745535 NM_014686 AB002353 BX648432	-15774	+	TSC_hg19_v1_chr19_+_34710343 AL117499	-50904	+	TSC_hg19_v1_chr19_+_34663440 AL834398 AK027643 AB069974 AB069975	-97816	+	TSC_hg19_v1_chr19_+_34856083 NM_001184722 AK294396 NM_000175	94556	+	TSC_hg19_v1_chr19_+_34856150 AB209575 AK301103	94854	+	AK293446 TSC_hg19_v1_chr19_+_34856160 BC004982 K03515 X16539 DQ892924 DQ896173	94878	+	NM_014686|KIAA0355|9710|KIAA0355##AB002353|KIAA0355|9710|KIAA0355##AL117499|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AL834398|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AK027643|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069974|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##AB069975|LSM14A|26065|LSM14A, SCD6 homolog A (S. cerevisiae)##NM_001184722|GPI|2821|glucose-6-phosphate isomerase##AK294396|GPI|2821|glucose-6-phosphate isomerase##NM_000175|GPI|2821|glucose-6-phosphate isomerase##AB209575|GPI|2821|glucose-6-phosphate isomerase##AK301103|GPI|2821|glucose-6-phosphate isomerase##AK293446|GPI|2821|glucose-6-phosphate isomerase##BC004982|GPI|2821|glucose-6-phosphate isomerase##K03515|GPI|2821|glucose-6-phosphate isomerase##X16539|GPI|2821|glucose-6-phosphate isomerase##DQ892924|GPI|2821|glucose-6-phosphate isomerase##DQ896173|GPI|2821|glucose-6-phosphate isomerase	0.0	
chr19	45757023	45757182	reg1023659.p1	3.402	+	TSC_hg19_v1_chr19_+_45754571 BC071948 AK075272 AY057448 AB058763 AY120867	-2404	+	TSC_hg19_v1_chr19_+_45754522 NM_001199867 NM_031417 AB049127 AB088047	-2575	+	AK225791 AK093466 AX748143 NM_138568	-19635	-	TSC_hg19_v1_chr19_-_45822843 BT006793 DQ890539 DQ893701	65806	-	AK297900 AK129878 AK300730 AK313281 BC007462 TSC_hg19_v1_chr19_-_45826134 M14780	69032	-	NM_001824 TSC_hg19_v1_chr19_-_45826232	69130	-	BC071948|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AK075272|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AY057448|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AB058763|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AY120867|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##NM_001199867|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##NM_031417|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AB049127|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AB088047|MARK4|57787|MAP/microtubule affinity-regulating kinase 4##AK225791|EXOC3L2|90332|exocyst complex component 3-like 2##AK093466|EXOC3L2|90332|exocyst complex component 3-like 2##NM_138568|EXOC3L2|90332|exocyst complex component 3-like 2##BT006793|CKM|1158|creatine kinase, muscle##DQ890539|CKM|1158|creatine kinase, muscle##DQ893701|CKM|1158|creatine kinase, muscle##AK129878|CKM|1158|creatine kinase, muscle##AK300730|CKM|1158|creatine kinase, muscle##AK313281|CKM|1158|creatine kinase, muscle##BC007462|CKM|1158|creatine kinase, muscle##M14780|CKM|1158|creatine kinase, muscle##NM_001824|CKM|1158|creatine kinase, muscle	0.0	
chr19	47776826	47776957	reg1039349.p1	3.402	+	TSC_hg19_v1_chr19_+_47759811 BC002787 BC009743	-17073	+	NM_015603 AK302153 TSC_hg19_v1_chr19_+_47759781 AL050284	-17130	+	AB590880 AK298837 AF354654 AF354655 AF354656 NM_001127240 NM_001127241 NM_001127242	-40951	-	TSC_hg19_v1_chr19_+_47778141 BC022076 BC045749 NM_178511 BC064510	1245	+	BC008982 NM_001736 TSC_hg19_v1_chr19_+_47813117 M62505	36211	+	AB038237 NM_018485	63479	+	BC002787|CCDC9|26093|coiled-coil domain containing 9##BC009743|CCDC9|26093|coiled-coil domain containing 9##NM_015603|CCDC9|26093|coiled-coil domain containing 9##AK302153|CCDC9|26093|coiled-coil domain containing 9##AL050284|CCDC9|26093|coiled-coil domain containing 9##AK298837|BBC3|27113|BCL2 binding component 3##AF354654|BBC3|27113|BCL2 binding component 3##AF354655|BBC3|27113|BCL2 binding component 3##AF354656|BBC3|27113|BCL2 binding component 3##NM_001127240|BBC3|27113|BCL2 binding component 3##NM_001127241|BBC3|27113|BCL2 binding component 3##NM_001127242|BBC3|27113|BCL2 binding component 3##BC022076|PRR24|255783|proline rich 24##BC045749|PRR24|255783|proline rich 24##NM_178511|PRR24|255783|proline rich 24##BC064510|PRR24|255783|proline rich 24##BC008982|C5AR1|728|complement component 5a receptor 1##NM_001736|C5AR1|728|complement component 5a receptor 1##M62505|C5AR1|728|complement component 5a receptor 1##AB038237|GPR77|27202|G protein-coupled receptor 77##NM_018485|GPR77|27202|G protein-coupled receptor 77	0.0	
chr20	25262014	25262089	reg1025008.p1	3.402	+	TSC_hg19_v1_chr20_+_25228699 NM_002862 AK309036 AK299697 BC017045 J03544 BC030795 AB209080 U47025 DQ894674 EU176283	-33293	+	AK302395 AK297954 TSC_hg19_v1_chr20_+_25176475	-85571	+	TSC_hg19_v1_chr20_+_25176363 AK308626 NM_001114089 NM_001247 AK303786 CR936750 AK293256 AK128412 AK300028 AF039916 AK300514 CR936765 AL834158 BC025980 AY327581	-85681	+	CU680756 AK075023 AK290815 AK293495 TSC_hg19_v1_chr20_-_25371426	109334	-	TSC_hg19_v1_chr20_-_25371452 BC014049 NM_001042472 NM_015600	109475	-	BC012542 NM_021067 TSC_hg19_v1_chr20_+_25388323	126271	+	NM_002862|PYGB|5834|phosphorylase, glycogen; brain##AK309036|PYGB|5834|phosphorylase, glycogen; brain##AK299697|PYGB|5834|phosphorylase, glycogen; brain##BC017045|PYGB|5834|phosphorylase, glycogen; brain##J03544|PYGB|5834|phosphorylase, glycogen; brain##BC030795|PYGB|5834|phosphorylase, glycogen; brain##AB209080|PYGB|5834|phosphorylase, glycogen; brain##U47025|PYGB|5834|phosphorylase, glycogen; brain##DQ894674|PYGB|5834|phosphorylase, glycogen; brain##EU176283|PYGB|5834|phosphorylase, glycogen; brain##AK302395|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK297954|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK308626|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001114089|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##NM_001247|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK303786|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936750|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK293256|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK128412|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300028|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AF039916|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK300514|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##CR936765|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AL834158|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##BC025980|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AY327581|ENTPD6|955|ectonucleoside triphosphate diphosphohydrolase 6 (putative)##AK075023|ABHD12|26090|abhydrolase domain containing 12##AK290815|ABHD12|26090|abhydrolase domain containing 12##AK293495|ABHD12|26090|abhydrolase domain containing 12##BC014049|ABHD12|26090|abhydrolase domain containing 12##NM_001042472|ABHD12|26090|abhydrolase domain containing 12##NM_015600|ABHD12|26090|abhydrolase domain containing 12##BC012542|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)##NM_021067|GINS1|9837|GINS complex subunit 1 (Psf1 homolog)	0.050625	
chr21	35340557	35340635	reg1039975.p1	3.402	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-52504	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-149926	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-325741	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	105245	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	105333	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	395750	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.0	
chr2	8453606	8453681	reg1030523.p2	3.402	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-1396056	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-1435780	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-1446940	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	368560	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	524076	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	690178	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr3	129345646	129345815	reg1044653.p2	3.402	+	TSC_hg19_v1_chr3_-_129325518 NM_015103 AB014520 AY116661 BC150280	-20291	-	AY158091 NM_153833	-83674	+	NM_000539 BX537381 BC112104 BC112106 AB464154 AM392780	-98203	+	AK291448 BC039859 NM_001017395	253580	-	TSC_hg19_v1_chr3_-_129612445 NM_001128224	266688	-	TSC_hg19_v1_chr3_+_129612705 AK127796	266988	+	NM_015103|PLXND1|23129|plexin D1##AB014520|PLXND1|23129|plexin D1##AY116661|PLXND1|23129|plexin D1##BC150280|PLXND1|23129|plexin D1##AY158091|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_153833|H1FOO|132243|H1 histone family, member O, oocyte-specific##NM_000539|RHO|6010|rhodopsin##BX537381|RHO|6010|rhodopsin##BC112104|RHO|6010|rhodopsin##BC112106|RHO|6010|rhodopsin##AM392780|RHO|6010|rhodopsin##AK291448|TMCC1|23023|transmembrane and coiled-coil domain family 1##BC039859|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001017395|TMCC1|23023|transmembrane and coiled-coil domain family 1##NM_001128224|TMCC1|23023|transmembrane and coiled-coil domain family 1##AK127796|LOC100507032|100507032|uncharacterized LOC100507032	0.0	
chr6	157101594	157101775	reg1041246.p2	3.402	+	TSC_hg19_v1_chr6_+_157099876 AF253515	-1809	+	TSC_hg19_v1_chr6_+_157099283 AF521671	-2400	+	TSC_hg19_v1_chr6_+_157099206 AB587572	-2459	+	TSC_hg19_v1_chr6_-_157744547 AK000891 BC029130 BC146893 BC146895 AF161405 AF217510	642900	-	TSC_hg19_v1_chr6_-_157745183 NM_018452	643533	-	TSC_hg19_v1_chr6_+_157802538 AF542388 AF542389 NM_024630 NM_153746 BC125072 BC125073	700855	+	AF253515|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AK000891|TMEM242|729515|transmembrane protein 242##BC029130|TMEM242|729515|transmembrane protein 242##BC146893|TMEM242|729515|transmembrane protein 242##BC146895|TMEM242|729515|transmembrane protein 242##AF161405|TMEM242|729515|transmembrane protein 242##AF217510|TMEM242|729515|transmembrane protein 242##NM_018452|TMEM242|729515|transmembrane protein 242##AF542388|ZDHHC14|79683|zinc finger, DHHC-type containing 14##AF542389|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_024630|ZDHHC14|79683|zinc finger, DHHC-type containing 14##NM_153746|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125072|ZDHHC14|79683|zinc finger, DHHC-type containing 14##BC125073|ZDHHC14|79683|zinc finger, DHHC-type containing 14	0.0	
chr6	86304386	86304452	reg1046417.p2	3.402	+	TSC_hg19_v1_chr6_-_86303574 AK295417 BC005110 BC068589 NM_020468 NM_153816	-787	-	TSC_hg19_v1_chr6_-_86303553 AK000362	-864	-	BC046520 AY044865 CU686683 TSC_hg19_v1_chr6_-_86303440 BC095419	-1026	-	AY034481 AY034482 AY034483 AB527543 CU689462 NM_001159675 NM_001159676	46743	-	TSC_hg19_v1_chr6_-_86352624 AB209098 BC015575 BC032643 BC009176 BC040844 NM_001159674 NM_001253771 BC024283 AK299796	48179	-	TSC_hg19_v1_chr6_-_86352643 NM_001159673	48222	-	AK295417|SNX14|57231|sorting nexin 14##BC005110|SNX14|57231|sorting nexin 14##BC068589|SNX14|57231|sorting nexin 14##NM_020468|SNX14|57231|sorting nexin 14##NM_153816|SNX14|57231|sorting nexin 14##AK000362|SNX14|57231|sorting nexin 14##BC046520|SNX14|57231|sorting nexin 14##AY044865|SNX14|57231|sorting nexin 14##BC095419|SNX14|57231|sorting nexin 14##AY034481|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AY034482|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AY034483|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159675|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159676|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AB209098|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##BC015575|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##BC032643|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##BC009176|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##BC040844|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159674|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001253771|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##BC024283|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AK299796|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159673|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein	0.0	
chr9	126875471	126875555	reg1044511.p1	3.402	+	TSC_hg19_v1_chr9_+_126774046 BC034458	-101442	+	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	-101630	+	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	-183202	-	TSC_hg19_v1_chr9_+_127020232 NM_001166167 BC000101 NM_001145001 NM_014397	144497	+	BC004174 BC004209 TSC_hg19_v1_chr9_+_127020244 BC012761	144732	+	TSC_hg19_v1_chr9_+_127020255 AB026289	144751	+	BC034458|LHX2|9355|LIM homeobox 2##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##NM_001166167|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC000101|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_001145001|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##NM_014397|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004174|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC004209|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##BC012761|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6##AB026289|NEK6|10783|NIMA (never in mitosis gene a)-related kinase 6	0.027966	
chr12	113796122	113796267	reg1036699.p1	3.401	+	TSC_hg19_v1_chr12_-_113772942 NM_024959 AK056179	-23269	-	BC098174 BC098360 TSC_hg19_v1_chr12_-_113772887	-23333	-	TSC_hg19_v1_chr12_+_113659290 BC142664 AK057414 BC150203	-136891	+	BC002929 BC071832 NM_001159727 NM_173542 TSC_hg19_v1_chr12_+_113796372	177	+	TSC_hg19_v1_chr12_+_113796394 BC030618	192	+	J05037 TSC_hg19_v1_chr12_-_113841693 AK292760 BC020750 NM_006843	45480	-	NM_024959|SLC24A6|80024|solute carrier family 24 (sodium/potassium/calcium exchanger), member 6##AK056179|SLC24A6|80024|solute carrier family 24 (sodium/potassium/calcium exchanger), member 6##BC098360|SLC24A6|80024|solute carrier family 24 (sodium/potassium/calcium exchanger), member 6##BC142664|TPCN1|53373|two pore segment channel 1##AK057414|TPCN1|53373|two pore segment channel 1##BC150203|TPCN1|53373|two pore segment channel 1##NM_001159727|PLBD2|196463|phospholipase B domain containing 2##NM_173542|PLBD2|196463|phospholipase B domain containing 2##BC030618|PLBD2|196463|phospholipase B domain containing 2##J05037|SDS|10993|serine dehydratase##AK292760|SDS|10993|serine dehydratase##BC020750|SDS|10993|serine dehydratase##NM_006843|SDS|10993|serine dehydratase	0.0	
chr1	225082805	225082899	reg1034073.p2	3.401	+	TSC_hg19_v1_chr1_+_224804182 AK096312 NM_152495	-278673	+	AB209887 NM_001115113 NM_025160	-460852	-	AK307909 TSC_hg19_v1_chr1_-_224621786 BC034498 AB385130	-461092	-	TSC_hg19_v1_chr1_+_225117383 NM_001145154 NM_001373 NM_144989 BC119716 BC119717 BC042869	34513	+	AK222834 TSC_hg19_v1_chr1_-_225615757 L25931 AB209514 BC020079 AK303589 AK312258	532877	-	TSC_hg19_v1_chr1_-_225615798 NM_002296	532949	-	AK096312|CNIH3|149111|cornichon homolog 3 (Drosophila)##NM_152495|CNIH3|149111|cornichon homolog 3 (Drosophila)##AB209887|WDR26|80232|WD repeat domain 26##NM_001115113|WDR26|80232|WD repeat domain 26##NM_025160|WDR26|80232|WD repeat domain 26##AK307909|WDR26|80232|WD repeat domain 26##BC034498|WDR26|80232|WD repeat domain 26##NM_001145154|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_001373|DNAH14|127602|dynein, axonemal, heavy chain 14##NM_144989|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119716|DNAH14|127602|dynein, axonemal, heavy chain 14##BC119717|DNAH14|127602|dynein, axonemal, heavy chain 14##BC042869|DNAH14|127602|dynein, axonemal, heavy chain 14##AK222834|LBR|3930|lamin B receptor##L25931|LBR|3930|lamin B receptor##AB209514|LBR|3930|lamin B receptor##BC020079|LBR|3930|lamin B receptor##AK303589|LBR|3930|lamin B receptor##AK312258|LBR|3930|lamin B receptor##NM_002296|LBR|3930|lamin B receptor	0.834479	CTCF.p2:6:0.834
chr1	236323274	236323390	reg1041440.p2	3.401	+	BC012100 NM_003272 TSC_hg19_v1_chr1_+_236305838 AK295408 AK312908 AK223632 AK301552 AF027826 AY242135 CR541770	-17456	+	TSC_hg19_v1_chr1_-_236228670 BC012501	-94592	-	TSC_hg19_v1_chr1_-_236228496 AK297234	-94834	-	CU689552 BC032823 AF252538 AK315351 TSC_hg19_v1_chr1_-_236445259 BC044573	121856	-	TSC_hg19_v1_chr1_-_236445302 AK293941 NM_019891	121984	-	AK290862 AY028913 NM_145861 BC106873 BC106874 BC114557 BC114560 BC128082	234351	+	BC012100|GPR137B|7107|G protein-coupled receptor 137B##NM_003272|GPR137B|7107|G protein-coupled receptor 137B##AK295408|GPR137B|7107|G protein-coupled receptor 137B##AK312908|GPR137B|7107|G protein-coupled receptor 137B##AK223632|GPR137B|7107|G protein-coupled receptor 137B##AK301552|GPR137B|7107|G protein-coupled receptor 137B##AF027826|GPR137B|7107|G protein-coupled receptor 137B##AY242135|GPR137B|7107|G protein-coupled receptor 137B##CR541770|GPR137B|7107|G protein-coupled receptor 137B##BC012501|NID1|4811|nidogen 1##AK297234|NID1|4811|nidogen 1##BC032823|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AF252538|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK315351|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##BC044573|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK293941|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##NM_019891|ERO1LB|56605|ERO1-like beta (S. cerevisiae)##AK290862|EDARADD|128178|EDAR-associated death domain##AY028913|EDARADD|128178|EDAR-associated death domain##NM_145861|EDARADD|128178|EDAR-associated death domain##BC114557|EDARADD|128178|EDAR-associated death domain##BC114560|EDARADD|128178|EDAR-associated death domain##BC128082|EDARADD|128178|EDAR-associated death domain	0.0	
chr13	99922186	99922361	reg1009676.p2	3.401	+	AF261135 BC050646 AF339781 BC008569 NM_001098200 NM_005292	-11659	-	TSC_hg19_v1_chr13_+_99853107 AK129861 AK075419 AK075516 AK300908 AK124404 AK054563 NM_177967	-69154	+	TSC_hg19_v1_chr13_-_99852951 BC043515 AK097488	-69306	-	TSC_hg19_v1_chr13_-_99959654 AK223390 BC020752 AK292091 AK313443 NM_004951	37425	-	TSC_hg19_v1_chr13_+_100153694 BC110656 AK290514 AK315210 AK225800 NM_004800 U81006	231427	+	TSC_hg19_v1_chr13_+_100153777 BC130293	231509	+	AF261135|GPR18|2841|G protein-coupled receptor 18##BC050646|GPR18|2841|G protein-coupled receptor 18##AF339781|GPR18|2841|G protein-coupled receptor 18##BC008569|GPR18|2841|G protein-coupled receptor 18##NM_001098200|GPR18|2841|G protein-coupled receptor 18##NM_005292|GPR18|2841|G protein-coupled receptor 18##AK129861|UBAC2|337867|UBA domain containing 2##AK075419|UBAC2|337867|UBA domain containing 2##AK075516|UBAC2|337867|UBA domain containing 2##AK300908|UBAC2|337867|UBA domain containing 2##AK124404|UBAC2|337867|UBA domain containing 2##AK054563|UBAC2|337867|UBA domain containing 2##NM_177967|UBAC2|337867|UBA domain containing 2##BC043515|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK097488|UBAC2-AS1|100289373|UBAC2 antisense RNA 1 (non-protein coding)##AK223390|GPR183|1880|G protein-coupled receptor 183##BC020752|GPR183|1880|G protein-coupled receptor 183##AK292091|GPR183|1880|G protein-coupled receptor 183##AK313443|GPR183|1880|G protein-coupled receptor 183##NM_004951|GPR183|1880|G protein-coupled receptor 183##BC110656|TM9SF2|9375|transmembrane 9 superfamily member 2##AK290514|TM9SF2|9375|transmembrane 9 superfamily member 2##AK315210|TM9SF2|9375|transmembrane 9 superfamily member 2##AK225800|TM9SF2|9375|transmembrane 9 superfamily member 2##NM_004800|TM9SF2|9375|transmembrane 9 superfamily member 2##U81006|TM9SF2|9375|transmembrane 9 superfamily member 2##BC130293|TM9SF2|9375|transmembrane 9 superfamily member 2	0.0	
chr14	105536596	105536777	reg1038138.p2	3.401	+	TSC_hg19_v1_chr14_-_105531768 AB465599 AB465600 AK292142 AK303654 AX775935 AX775841	-4913	-	TSC_hg19_v1_chr14_-_105531756 AF083955 AX775937 NM_013345 EU543705	-4938	-	TSC_hg19_v1_chr14_-_105487428 NM_017955 NM_145701	-49262	-	Y14330 AF003521 AF020201 TSC_hg19_v1_chr14_-_105634835 BC032053	98105	-	TSC_hg19_v1_chr14_-_105635114 AF029778 AF029779 NM_002226 NM_145159	98451	-	TSC_hg19_v1_chr14_-_105647650 AB087802 HQ257983 BC041584 AK128196 AK310449 NM_177533	110908	-	AB465599|GPR132|29933|G protein-coupled receptor 132##AB465600|GPR132|29933|G protein-coupled receptor 132##AK292142|GPR132|29933|G protein-coupled receptor 132##AK303654|GPR132|29933|G protein-coupled receptor 132##AX775935|GPR132|29933|G protein-coupled receptor 132##AX775841|GPR132|29933|G protein-coupled receptor 132##AF083955|GPR132|29933|G protein-coupled receptor 132##NM_013345|GPR132|29933|G protein-coupled receptor 132##EU543705|GPR132|29933|G protein-coupled receptor 132##NM_017955|CDCA4|55038|cell division cycle associated 4##NM_145701|CDCA4|55038|cell division cycle associated 4##Y14330|JAG2|3714|jagged 2##AF003521|JAG2|3714|jagged 2##AF020201|JAG2|3714|jagged 2##BC032053|JAG2|3714|jagged 2##AF029778|JAG2|3714|jagged 2##AF029779|JAG2|3714|jagged 2##NM_002226|JAG2|3714|jagged 2##NM_145159|JAG2|3714|jagged 2##AB087802|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##HQ257983|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##BC041584|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##AK128196|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14##NM_177533|NUDT14|256281|nudix (nucleoside diphosphate linked moiety X)-type motif 14	0.0	
chr14	76660855	76660982	reg1034559.p2	3.401	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-42612	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-42641	+	TSC_hg19_v1_chr14_+_76618258 NM_017926 NM_017972 BC058032	-42662	+	NM_004452	176771	+	TSC_hg19_v1_chr14_+_77227817 AK094330	566882	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	567537	+	AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_017926|C14orf118|55668|chromosome 14 open reading frame 118##NM_017972|C14orf118|55668|chromosome 14 open reading frame 118##BC058032|C14orf118|55668|chromosome 14 open reading frame 118##NM_004452|ESRRB|2103|estrogen-related receptor beta##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1	0.0	
chr15	101728866	101728999	reg1038357.p2	3.401	+	NM_024652 TSC_hg19_v1_chr15_+_101459533 BC068080	-269420	+	TSC_hg19_v1_chr15_-_101459500 BC073817 AK126286	-269458	-	TSC_hg19_v1_chr15_+_101420035 AK303441 AK312303 BC009245 AL110109 BC069274 U07919 AK302607 BX538027 AB385140 EU831943 EU832038	-308861	+	AB071402 TSC_hg19_v1_chr15_-_101791795	62804	-	BC046247 AY358529 AB023207 NM_014918 TSC_hg19_v1_chr15_-_101792143	63203	-	AY618665 TSC_hg19_v1_chr15_-_101817666 BC005840 AK225955 BC107774 AF157317 AF328864 AY324824 AK097011 AK026455 AK314723 NM_018445 NM_203472	88731	-	NM_024652|LRRK1|79705|leucine-rich repeat kinase 1##BC068080|LRRK1|79705|leucine-rich repeat kinase 1##AK303441|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK312303|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC009245|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AL110109|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BC069274|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##U07919|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AK302607|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##BX538027|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU831943|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##EU832038|ALDH1A3|220|aldehyde dehydrogenase 1 family, member A3##AB071402|CHSY1|22856|chondroitin sulfate synthase 1##BC046247|CHSY1|22856|chondroitin sulfate synthase 1##AY358529|CHSY1|22856|chondroitin sulfate synthase 1##AB023207|CHSY1|22856|chondroitin sulfate synthase 1##NM_014918|CHSY1|22856|chondroitin sulfate synthase 1##AY618665|SELS|55829|selenoprotein S##BC005840|SELS|55829|selenoprotein S##AK225955|SELS|55829|selenoprotein S##BC107774|SELS|55829|selenoprotein S##AF157317|SELS|55829|selenoprotein S##AF328864|SELS|55829|selenoprotein S##AY324824|SELS|55829|selenoprotein S##AK097011|SELS|55829|selenoprotein S##AK026455|SELS|55829|selenoprotein S##AK314723|SELS|55829|selenoprotein S##NM_018445|SELS|55829|selenoprotein S##NM_203472|SELS|55829|selenoprotein S	0.0	
chr16	5437239	5437419	reg1043959.p1	3.401	+	CU679605 BC010084 TSC_hg19_v1_chr16_-_5147756 AY037162 NM_201400 NM_201598	-289561	-	NM_019109 TSC_hg19_v1_chr16_+_5121825 AK075373 BC031095 AB019038 BC004402 AK311475 CU678708 DQ895010 EU176309	-315499	+	TSC_hg19_v1_chr16_-_5116030 BC033681 AY358483 NM_001098514 NM_152459	-321242	-	AB208826 AF107203 AF448859 NM_001142333 NM_018723 AL713700 TSC_hg19_v1_chr16_+_6069353	631896	+	TSC_hg19_v1_chr16_+_6533765 BC033885	1096446	+	AK001027 NM_001142334	1386480	+	BC010084|FAM86A|196483|family with sequence similarity 86, member A##AY037162|FAM86A|196483|family with sequence similarity 86, member A##NM_201400|FAM86A|196483|family with sequence similarity 86, member A##NM_201598|FAM86A|196483|family with sequence similarity 86, member A##NM_019109|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK075373|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC031095|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AB019038|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC004402|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##AK311475|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##DQ895010|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##EU176309|ALG1|56052|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog (S. cerevisiae)##BC033681|C16orf89|146556|chromosome 16 open reading frame 89##AY358483|C16orf89|146556|chromosome 16 open reading frame 89##NM_001098514|C16orf89|146556|chromosome 16 open reading frame 89##NM_152459|C16orf89|146556|chromosome 16 open reading frame 89##AB208826|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF107203|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AF448859|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142333|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_018723|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AL713700|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##BC033885|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##AK001027|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1##NM_001142334|RBFOX1|54715|RNA binding protein, fox-1 homolog (C. elegans) 1	0.0	
chr16	71496308	71496386	reg1024528.p2	3.401	+	AK123826 TSC_hg19_v1_chr16_+_71496196	-159	+	TSC_hg19_v1_chr16_-_71496127 AF507946 BC007256 NM_145911 BC048974 AK091039 AX746746 AK297130	-226	-	TSC_hg19_v1_chr16_+_71392648 BC015484 X56667	-103703	+	AK292260 BC030658 AK057330 BC047091 NM_006961	26868	-	NM_005769 AF131235 NM_001166395 AK026635 AK074746	63746	+	X55675 BC130534 BC020707 BC022292 X52520 AK313380 NM_000353	114625	-	AF507946|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC007256|ZNF23|7571|zinc finger protein 23 (KOX 16)##NM_145911|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC048974|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK091039|ZNF23|7571|zinc finger protein 23 (KOX 16)##AK297130|ZNF23|7571|zinc finger protein 23 (KOX 16)##BC015484|CALB2|794|calbindin 2##X56667|CALB2|794|calbindin 2##AK292260|ZNF19|7567|zinc finger protein 19##AK057330|ZNF19|7567|zinc finger protein 19##BC047091|ZNF19|7567|zinc finger protein 19##NM_006961|ZNF19|7567|zinc finger protein 19##NM_005769|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AF131235|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##NM_001166395|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK026635|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##AK074746|CHST4|10164|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4##X55675|TAT|6898|tyrosine aminotransferase##BC130534|TAT|6898|tyrosine aminotransferase##BC020707|TAT|6898|tyrosine aminotransferase##BC022292|TAT|6898|tyrosine aminotransferase##X52520|TAT|6898|tyrosine aminotransferase##AK313380|TAT|6898|tyrosine aminotransferase##NM_000353|TAT|6898|tyrosine aminotransferase	0.507989	CTCF.p2:30:0.508
chr17	27444164	27444268	reg1010169.p1	3.401	+	AK054958 NM_004740	-41590	-	TSC_hg19_v1_chr17_-_27401793 BC131561 BC047669	-42358	-	BC058075 TSC_hg19_v1_chr17_-_27401707	-42567	-	TSC_hg19_v1_chr17_-_27467408 AB177860 AY703984 AK303522 AK302725	23195	-	TSC_hg19_v1_chr17_-_27507417 CR933614 NM_078471 NM_203318 D86970	63134	-	NM_005208 BC113693 BC069537 CU686900 HQ258110	129661	+	AK054958|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##NM_004740|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC131561|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC047669|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##BC058075|TIAF1|9220|TGFB1-induced anti-apoptotic factor 1##AB177860|MYO18A|399687|myosin XVIIIA##AY703984|MYO18A|399687|myosin XVIIIA##AK303522|MYO18A|399687|myosin XVIIIA##AK302725|MYO18A|399687|myosin XVIIIA##CR933614|MYO18A|399687|myosin XVIIIA##NM_078471|MYO18A|399687|myosin XVIIIA##NM_203318|MYO18A|399687|myosin XVIIIA##D86970|MYO18A|399687|myosin XVIIIA##NM_005208|CRYBA1|1411|crystallin, beta A1##BC113693|CRYBA1|1411|crystallin, beta A1##BC069537|CRYBA1|1411|crystallin, beta A1##HQ258110|CRYBA1|1411|crystallin, beta A1	0.0	
chr17	47301566	47301690	reg1010387.p3	3.401	+	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-13551	+	NM_001198754	-13693	-	AB037886 NM_001135186 NM_016428	-14040	+	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	6515	-	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	137952	-	BC095460 TSC_hg19_v1_chr17_-_47492215	190587	-	BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AB037886|ABI3|51225|ABI family, member 3##NM_001135186|ABI3|51225|ABI family, member 3##NM_016428|ABI3|51225|ABI family, member 3##BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC095460|PHB|5245|prohibitin	0.0	
chr19	41903423	41903495	reg1026254.p1	3.401	+	TSC_hg19_v1_chr19_-_41903262 AB463622 BC007742 AK314941 AF281134 NM_020158 BC107696 AF285785	-160	-	NM_001042595 BC063705	-20277	+	NM_001098821 NM_001098822 NM_001098823 NM_001098824	-21022	+	NM_000709 NM_001164783 TSC_hg19_v1_chr19_+_41903714	245	+	TSC_hg19_v1_chr19_+_41903722 AL833143 BC023983 Z14093	261	+	TSC_hg19_v1_chr19_+_41903725 AK313300 AK298188 BC007878 BC008933 AB209828 J04474	273	+	BC007742|EXOSC5|56915|exosome component 5##AK314941|EXOSC5|56915|exosome component 5##AF281134|EXOSC5|56915|exosome component 5##NM_020158|EXOSC5|56915|exosome component 5##BC107696|EXOSC5|56915|exosome component 5##AF285785|EXOSC5|56915|exosome component 5##NM_001042595|TMEM91|641649|transmembrane protein 91##BC063705|TMEM91|641649|transmembrane protein 91##NM_001098821|TMEM91|641649|transmembrane protein 91##NM_001098822|TMEM91|641649|transmembrane protein 91##NM_001098823|TMEM91|641649|transmembrane protein 91##NM_001098824|TMEM91|641649|transmembrane protein 91##NM_000709|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##NM_001164783|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##AL833143|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##BC023983|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##Z14093|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##AK313300|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##AK298188|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##BC007878|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##BC008933|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##AB209828|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide##J04474|BCKDHA|593|branched chain keto acid dehydrogenase E1, alpha polypeptide	0.0	
chr20	34787987	34788065	reg1005440.p2	3.401	+	TSC_hg19_v1_chr20_+_34742659 NM_012156 AB002336	-45361	+	CR936825 NM_177996	-87724	+	TSC_hg19_v1_chr20_+_34680631 AK096848 AK299817 AK126875 BC040259	-107375	+	TSC_hg19_v1_chr20_+_34824399 AL117419	36363	+	TSC_hg19_v1_chr20_+_34824402 BC001751 BC019311 NM_015511	36397	+	TSC_hg19_v1_chr20_+_34894262 AB023181	106229	+	NM_012156|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AB002336|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##CR936825|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##NM_177996|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK096848|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK299817|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AK126875|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##BC040259|EPB41L1|2036|erythrocyte membrane protein band 4.1-like 1##AL117419|C20orf4|25980|chromosome 20 open reading frame 4##BC001751|C20orf4|25980|chromosome 20 open reading frame 4##BC019311|C20orf4|25980|chromosome 20 open reading frame 4##NM_015511|C20orf4|25980|chromosome 20 open reading frame 4##AB023181|DLGAP4|22839|discs, large (Drosophila) homolog-associated protein 4	0.0	
chr22	50888420	50888601	reg1040051.p2	3.401	+	AB014585 TSC_hg19_v1_chr22_+_50781776 BC041698 AK302472	-106707	+	TSC_hg19_v1_chr22_+_50781755 NM_001242898 NM_001242899 NM_001242900 NM_014678 BC032664 BC006568 BC052995	-106767	+	AK054743 AK022407 BC031069 NM_001001794	-123064	-	BC046169 TSC_hg19_v1_chr22_-_50893787 BC056915	5256	-	EU831421 EU831514 BC111424 BC087612 TSC_hg19_v1_chr22_-_50913465 BC040031 AK057985 NM_002972	24878	-	TSC_hg19_v1_chr22_+_50919971 AK024788 AK225097 NM_024866 AB236970 NM_001253845 AK090635 AB463404 AB121034 AF529213	31613	+	AB014585|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC041698|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##AK302472|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242898|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242899|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_001242900|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##NM_014678|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC032664|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC006568|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##BC052995|PPP6R2|9701|protein phosphatase 6, regulatory subunit 2##AK054743|FAM116B|414918|family with sequence similarity 116, member B##BC031069|FAM116B|414918|family with sequence similarity 116, member B##NM_001001794|FAM116B|414918|family with sequence similarity 116, member B##BC046169|SBF1|6305|SET binding factor 1##BC056915|SBF1|6305|SET binding factor 1##EU831421|SBF1|6305|SET binding factor 1##EU831514|SBF1|6305|SET binding factor 1##BC087612|SBF1|6305|SET binding factor 1##BC040031|SBF1|6305|SET binding factor 1##AK057985|SBF1|6305|SET binding factor 1##NM_002972|SBF1|6305|SET binding factor 1##AK024788|ADM2|79924|adrenomedullin 2##NM_024866|ADM2|79924|adrenomedullin 2##AB236970|ADM2|79924|adrenomedullin 2##NM_001253845|ADM2|79924|adrenomedullin 2##AK090635|ADM2|79924|adrenomedullin 2##AB121034|ADM2|79924|adrenomedullin 2##AF529213|ADM2|79924|adrenomedullin 2	0.0	
chr7	105028035	105028102	reg1040561.p1	3.401	+	BC035214 TSC_hg19_v1_chr7_-_104909496 U88666 NM_182691	-118585	-	TSC_hg19_v1_chr7_+_104752313 AY222296 AY438698	-275690	+	TSC_hg19_v1_chr7_+_104681423 AY157990	-346654	+	TSC_hg19_v1_chr7_-_105029265 AB489157	1197	-	TSC_hg19_v1_chr7_-_105029346 NM_182692	1274	-	TSC_hg19_v1_chr7_-_105162688 BC011396 AK091283 AX746894 NM_019042 AK128629	134593	-	BC035214|SRPK2|6733|SRSF protein kinase 2##U88666|SRPK2|6733|SRSF protein kinase 2##NM_182691|SRPK2|6733|SRSF protein kinase 2##AY222296|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY438698|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##AY157990|MLL5|55904|myeloid/lymphoid or mixed-lineage leukemia 5 (trithorax homolog, Drosophila)##NM_182692|SRPK2|6733|SRSF protein kinase 2##BC011396|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK091283|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##NM_019042|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)##AK128629|PUS7|54517|pseudouridylate synthase 7 homolog (S. cerevisiae)	0.0	
chr8	142138710	142138790	reg1026463.p3	3.401	+	TSC_hg19_v1_chr8_+_142138725 NM_014957 AK058001 BC110827	-13	+	TSC_hg19_v1_chr8_-_142011326 AK304356 AL832961 AB209083 AB209071 L13616 NM_001199649 NM_005607 NM_153831	-127494	-	TSC_hg19_v1_chr8_-_141645612 BC125213 BC125214 NM_001164623 NM_012154	-493126	-	AK128212 NM_001080431	99922	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	125440	-	NM_005293	238614	-	NM_014957|DENND3|22898|DENN/MADD domain containing 3##AK058001|DENND3|22898|DENN/MADD domain containing 3##BC110827|DENND3|22898|DENN/MADD domain containing 3##AK304356|PTK2|5747|PTK2 protein tyrosine kinase 2##AL832961|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209083|PTK2|5747|PTK2 protein tyrosine kinase 2##AB209071|PTK2|5747|PTK2 protein tyrosine kinase 2##L13616|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_001199649|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_005607|PTK2|5747|PTK2 protein tyrosine kinase 2##NM_153831|PTK2|5747|PTK2 protein tyrosine kinase 2##BC125213|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##BC125214|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_001164623|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##NM_012154|EIF2C2|27161|eukaryotic translation initiation factor 2C, 2##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##NM_005293|GPR20|2843|G protein-coupled receptor 20	0.015397	
chr9	100955271	100955349	reg1030310.p1	3.401	+	TSC_hg19_v1_chr9_-_100954922 AK292788 BC011690 AB209809 NM_052820	-377	-	NM_003389	-20137	-	TSC_hg19_v1_chr9_-_100881526 AK055833	-73766	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	62411	-	TSC_hg19_v1_chr9_-_101018013 NM_018421	62694	-	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	515875	-	AK292788|CORO2A|7464|coronin, actin binding protein, 2A##BC011690|CORO2A|7464|coronin, actin binding protein, 2A##AB209809|CORO2A|7464|coronin, actin binding protein, 2A##NM_052820|CORO2A|7464|coronin, actin binding protein, 2A##NM_003389|CORO2A|7464|coronin, actin binding protein, 2A##AK055833|TRIM14|9830|tripartite motif containing 14##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##NM_018421|TBC1D2|55357|TBC1 domain family, member 2##DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2	0.0	
chrX	39714516	39714679	reg1025188.p2	3.401	+	TSC_hg19_v1_chrX_+_38663536 AK001248	-1051057	+	TSC_hg19_v1_chrX_+_38663455 AJ272057	-1051137	+	BC008908 NM_021242	-1051525	+	AF317391 AF317392 AY316592 TSC_hg19_v1_chrX_-_39956720 NM_001123385 NM_017745	242095	-	BC114220 NM_001123383 NM_001123384	321984	-	AK297760 AK075382 TSC_hg19_v1_chrX_+_40440221 AF248966 AY038990 NM_005765 AK296614	725589	+	AK001248|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AJ272057|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##AF317391|BCOR|54880|BCL6 corepressor##AF317392|BCOR|54880|BCL6 corepressor##AY316592|BCOR|54880|BCL6 corepressor##NM_001123385|BCOR|54880|BCL6 corepressor##NM_017745|BCOR|54880|BCL6 corepressor##BC114220|BCOR|54880|BCL6 corepressor##NM_001123383|BCOR|54880|BCL6 corepressor##NM_001123384|BCOR|54880|BCL6 corepressor##AK297760|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK075382|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AF248966|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AY038990|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##NM_005765|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2##AK296614|ATP6AP2|10159|ATPase, H+ transporting, lysosomal accessory protein 2	0.0	
chr10	82842103	82842277	reg1007134.p2	3.400	+	AK123978 NM_001145719	-541616	+	AK123885 NM_207372	-544533	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-628086	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	792892	+	DQ857894 NM_001165973	795252	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	3057067	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.0	
chr13	32738923	32739040	reg1042492.p1	3.400	+	AL049784 NM_023037 U50534 TSC_hg19_v1_chr13_+_32605446	-133540	+	TSC_hg19_v1_chr13_+_32420857 BC021729	-318079	+	NM_001166058 NM_130806 AF453828 AB527208 AY899851	-425268	+	BC146956 BC146965 NM_001136571	147108	-	TSC_hg19_v1_chr13_+_32889621 NM_000059 U43746 BC026160 BC047568	150636	+	CU692492 TSC_hg19_v1_chr13_-_33002268 BC022188 AL049785 AL049786 AL049787 U50527 BC011650 BC068049 NM_001079691 NM_052818	263377	-	AL049784|FRY|10129|furry homolog (Drosophila)##NM_023037|FRY|10129|furry homolog (Drosophila)##U50534|FRY|10129|furry homolog (Drosophila)##BC021729|EEF1DP3|196549|eukaryotic translation elongation factor 1 delta pseudogene 3##NM_001166058|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##NM_130806|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AF453828|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##AY899851|RXFP2|122042|relaxin/insulin-like family peptide receptor 2##BC146956|ZAR1L|646799|zygote arrest 1-like##BC146965|ZAR1L|646799|zygote arrest 1-like##NM_001136571|ZAR1L|646799|zygote arrest 1-like##NM_000059|BRCA2|675|breast cancer 2, early onset##U43746|BRCA2|675|breast cancer 2, early onset##BC026160|BRCA2|675|breast cancer 2, early onset##BC047568|BRCA2|675|breast cancer 2, early onset##BC022188|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049785|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049786|N4BP2L1|90634|NEDD4 binding protein 2-like 1##AL049787|N4BP2L1|90634|NEDD4 binding protein 2-like 1##U50527|N4BP2L1|90634|NEDD4 binding protein 2-like 1##BC068049|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_001079691|N4BP2L1|90634|NEDD4 binding protein 2-like 1##NM_052818|N4BP2L1|90634|NEDD4 binding protein 2-like 1	0.907328	CTCF.p2:16:0.907
chr14	95587393	95587467	reg1044731.p1	3.400	+	AB463695 BC063580 AY177407 NM_173849	-351006	-	NM_001085 TSC_hg19_v1_chr14_+_95078727 AK123091 AK308565 BC070265 BC003559 AB209060 BC010530 BC034554 AY513275 AY513276	-508694	+	TSC_hg19_v1_chr14_+_95047798 AK293192 BC008915 AK096131	-539624	+	AB590557 HM595745 NM_001195573	12386	-	AB028449 NM_030621	20624	-	AY929254 AY929255 AY929256 TSC_hg19_v1_chr14_-_95623633	36192	-	BC063580|GSC|145258|goosecoid homeobox##AY177407|GSC|145258|goosecoid homeobox##NM_173849|GSC|145258|goosecoid homeobox##NM_001085|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AK123091|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC070265|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC003559|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AB209060|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC010530|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##BC034554|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AY513275|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AY513276|SERPINA3|12|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3##AK293192|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##BC008915|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##AK096131|SERPINA5|5104|serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5##HM595745|DICER1|23405|dicer 1, ribonuclease type III##NM_001195573|DICER1|23405|dicer 1, ribonuclease type III##AB028449|DICER1|23405|dicer 1, ribonuclease type III##NM_030621|DICER1|23405|dicer 1, ribonuclease type III##AY929254|DICER1|23405|dicer 1, ribonuclease type III##AY929255|DICER1|23405|dicer 1, ribonuclease type III##AY929256|DICER1|23405|dicer 1, ribonuclease type III	0.0	
chr15	25937404	25937497	reg1038362.p1	3.400	+	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	-253272	-	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	-253349	-	L07557 NM_130838	-286801	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	170903	-	AB051358 TSC_hg19_v1_chr15_-_26108932	171450	-	AK295167 NM_001191321 TSC_hg19_v1_chr15_-_26874238 BC038837	936830	-	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##AB051358|ATP10A|57194|ATPase, class V, type 10A##AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	0.013527	
chr15	99911540	99911607	reg1022887.p1	3.400	+	TSC_hg19_v1_chr15_+_99791696 BC047306 NM_144598 AK091588 AK296352 AX747076 AK295161 AK292887 AK293832 AY358082 BC019704	-119931	+	TSC_hg19_v1_chr15_-_99791423 AK023230 AK291690	-120157	-	TSC_hg19_v1_chr15_-_99789787 BC015728 AF411456 NM_001040655 NM_001040656 NM_001040657 NM_001040658 NM_001040659 NM_001040660 NM_022905	-121867	-	NM_001130926 NM_001130927 NM_001171894 NM_005587 TSC_hg19_v1_chr15_+_100106173 AB208985	194580	+	TSC_hg19_v1_chr15_+_100106196 AL831995 AK294207	194621	+	BC013437 TSC_hg19_v1_chr15_+_100106231 AK291835 X68504	194662	+	BC047306|LRRC28|123355|leucine rich repeat containing 28##NM_144598|LRRC28|123355|leucine rich repeat containing 28##AK091588|LRRC28|123355|leucine rich repeat containing 28##AK296352|LRRC28|123355|leucine rich repeat containing 28##AK295161|LRRC28|123355|leucine rich repeat containing 28##AK292887|LRRC28|123355|leucine rich repeat containing 28##AK293832|LRRC28|123355|leucine rich repeat containing 28##AY358082|LRRC28|123355|leucine rich repeat containing 28##BC019704|LRRC28|123355|leucine rich repeat containing 28##AK023230|TTC23|64927|tetratricopeptide repeat domain 23##AK291690|TTC23|64927|tetratricopeptide repeat domain 23##BC015728|TTC23|64927|tetratricopeptide repeat domain 23##AF411456|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040655|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040656|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040657|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040658|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040659|TTC23|64927|tetratricopeptide repeat domain 23##NM_001040660|TTC23|64927|tetratricopeptide repeat domain 23##NM_022905|TTC23|64927|tetratricopeptide repeat domain 23##NM_001130926|MEF2A|4205|myocyte enhancer factor 2A##NM_001130927|MEF2A|4205|myocyte enhancer factor 2A##NM_001171894|MEF2A|4205|myocyte enhancer factor 2A##NM_005587|MEF2A|4205|myocyte enhancer factor 2A##AB208985|MEF2A|4205|myocyte enhancer factor 2A##AL831995|MEF2A|4205|myocyte enhancer factor 2A##AK294207|MEF2A|4205|myocyte enhancer factor 2A##BC013437|MEF2A|4205|myocyte enhancer factor 2A##AK291835|MEF2A|4205|myocyte enhancer factor 2A##X68504|MEF2A|4205|myocyte enhancer factor 2A	0.0	
chr2	123601810	123601877	reg1043056.p1	3.400	+	NM_004622 TSC_hg19_v1_chr2_+_122513235 AK311410 AK315763 AK091915 BC002359 AK296469 AK298812 AK222868 X78627 AK307344 BT019490 BT019491	-1088606	+	AB528916 DQ891678 DQ894863 CU692772 TSC_hg19_v1_chr2_-_122494472 AK311033 AK299814 BC022990 BC024238 AK291903 AB044971 NM_032390	-1107378	-	BC047384 TSC_hg19_v1_chr2_+_122407687 BC036624 AK098264	-1194198	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	1181021	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	3811864	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	3811949	+	NM_004622|TSN|7247|translin##AK311410|TSN|7247|translin##AK315763|TSN|7247|translin##AK091915|TSN|7247|translin##BC002359|TSN|7247|translin##AK296469|TSN|7247|translin##AK298812|TSN|7247|translin##AK222868|TSN|7247|translin##X78627|TSN|7247|translin##AK307344|TSN|7247|translin##BT019490|TSN|7247|translin##BT019491|TSN|7247|translin##DQ891678|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##DQ894863|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK311033|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK299814|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC022990|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC024238|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AK291903|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##AB044971|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##NM_032390|MKI67IP|84365|MKI67 (FHA domain) interacting nucleolar phosphoprotein##BC047384|LOC254128|254128|uncharacterized LOC254128##BC036624|LOC254128|254128|uncharacterized LOC254128##AK098264|LOC254128|254128|uncharacterized LOC254128##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)	0.0	
chr22	34192597	34192724	reg1043890.p1	3.400	+	AB209684 TSC_hg19_v1_chr22_-_33454341 NM_001135774	-738305	-	CU013189 CU013477 HQ258468 AB463296 BC075065 BC075066 BC117460 BC143874 AF046873 CR456589 NM_003490 NM_133633	-789934	-	BC014277 TSC_hg19_v1_chr22_+_33197759	-994908	+	AJ007583 AB011181 NM_004737 NM_133642	123710	-	TSC_hg19_v1_chr22_+_35462140 CR749372 AK025181 NM_001008494	1269489	+	NM_001003681 TSC_hg19_v1_chr22_+_35653477 AK299833 BC080611 BC052624 AJ010070 AL079310 BC062413 BC011723 BC017326 BC033783	1460816	+	AB209684|SYN3|8224|synapsin III##NM_001135774|SYN3|8224|synapsin III##CU013189|SYN3|8224|synapsin III##CU013477|SYN3|8224|synapsin III##HQ258468|SYN3|8224|synapsin III##BC075065|SYN3|8224|synapsin III##BC075066|SYN3|8224|synapsin III##BC117460|SYN3|8224|synapsin III##BC143874|SYN3|8224|synapsin III##AF046873|SYN3|8224|synapsin III##CR456589|SYN3|8224|synapsin III##NM_003490|SYN3|8224|synapsin III##NM_133633|SYN3|8224|synapsin III##BC014277|TIMP3|7078|TIMP metallopeptidase inhibitor 3##AJ007583|LARGE|9215|like-glycosyltransferase##AB011181|LARGE|9215|like-glycosyltransferase##NM_004737|LARGE|9215|like-glycosyltransferase##NM_133642|LARGE|9215|like-glycosyltransferase##CR749372|ISX|91464|intestine-specific homeobox##AK025181|ISX|91464|intestine-specific homeobox##NM_001008494|ISX|91464|intestine-specific homeobox##NM_001003681|HMGXB4|10042|HMG box domain containing 4##AK299833|HMGXB4|10042|HMG box domain containing 4##BC080611|HMGXB4|10042|HMG box domain containing 4##BC052624|HMGXB4|10042|HMG box domain containing 4##AJ010070|HMGXB4|10042|HMG box domain containing 4##AL079310|HMGXB4|10042|HMG box domain containing 4##BC062413|HMGXB4|10042|HMG box domain containing 4##BC011723|HMGXB4|10042|HMG box domain containing 4##BC017326|HMGXB4|10042|HMG box domain containing 4##BC033783|HMGXB4|10042|HMG box domain containing 4	0.0	
chr3	180630074	180630205	reg1032147.p1	3.400	+	AK304270 NM_181426	-232868	-	AB075860 TSC_hg19_v1_chr3_+_180320970	-309176	+	TSC_hg19_v1_chr3_+_180319985 NM_001042601 NM_133462 AK055984 AL832052 AL833086 BX648669 BC027990 AL833103 AY358762 AK074095 EU832789 GQ129409 CU693360	-310136	+	TSC_hg19_v1_chr3_+_180630246 NM_001013438 NM_001013439 NM_005087	44	+	TSC_hg19_v1_chr3_+_180630462 AK294603 AK297254 AK297331 AK225334 AK292633 U25165 BC028983 AM393057 AM393164 AM393496 AB463046	339	+	NM_001190233 TSC_hg19_v1_chr3_-_180707525 AK311765 BC073989 BC009702 AK309019 AK307097 NM_145261	77294	-	AK304270|CCDC39|339829|coiled-coil domain containing 39##NM_181426|CCDC39|339829|coiled-coil domain containing 39##AB075860|TTC14|151613|tetratricopeptide repeat domain 14##NM_001042601|TTC14|151613|tetratricopeptide repeat domain 14##NM_133462|TTC14|151613|tetratricopeptide repeat domain 14##AK055984|TTC14|151613|tetratricopeptide repeat domain 14##AL832052|TTC14|151613|tetratricopeptide repeat domain 14##AL833086|TTC14|151613|tetratricopeptide repeat domain 14##BX648669|TTC14|151613|tetratricopeptide repeat domain 14##BC027990|TTC14|151613|tetratricopeptide repeat domain 14##AL833103|TTC14|151613|tetratricopeptide repeat domain 14##AY358762|TTC14|151613|tetratricopeptide repeat domain 14##EU832789|TTC14|151613|tetratricopeptide repeat domain 14##GQ129409|TTC14|151613|tetratricopeptide repeat domain 14##NM_001013438|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001013439|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_005087|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK294603|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297254|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK297331|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK225334|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AK292633|FXR1|8087|fragile X mental retardation, autosomal homolog 1##U25165|FXR1|8087|fragile X mental retardation, autosomal homolog 1##BC028983|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393057|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393164|FXR1|8087|fragile X mental retardation, autosomal homolog 1##AM393496|FXR1|8087|fragile X mental retardation, autosomal homolog 1##NM_001190233|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK311765|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC073989|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##BC009702|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##AK307097|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19##NM_145261|DNAJC19|131118|DnaJ (Hsp40) homolog, subfamily C, member 19	0.0	
chr3	50425940	50426029	reg1046862.p1	3.400	+	TSC_hg19_v1_chr3_-_50396943 NM_007024 AK314166	-29046	-	BC017367 TSC_hg19_v1_chr3_-_50396920 BC011948	-29074	-	BC008802 NM_006545	-37499	-	AJ251367 AJ251368 AB011130 BC152438 AB383908 NM_001005505 NM_001174051 NM_006030 AF040709 AF042792 AK310138 TSC_hg19_v1_chr3_-_50541066	114976	-	AK124438 AK311093 TSC_hg19_v1_chr3_-_50605192 BC034766 AK313128 AK308074 AK309486 AL833938 AK130227 NM_001171740 NM_001171743 NM_016210	179159	-	TSC_hg19_v1_chr3_+_50606919 BX537562 NM_016173 AK314023 AF172244 AK124369	180964	+	NM_007024|TMEM115|11070|transmembrane protein 115##AK314166|TMEM115|11070|transmembrane protein 115##BC017367|TMEM115|11070|transmembrane protein 115##BC011948|TMEM115|11070|transmembrane protein 115##BC008802|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##NM_006545|NPRL2|10641|nitrogen permease regulator-like 2 (S. cerevisiae)##AJ251367|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AJ251368|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AB011130|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##BC152438|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_001005505|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_001174051|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##NM_006030|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AF040709|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AF042792|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AK310138|CACNA2D2|9254|calcium channel, voltage-dependent, alpha 2/delta subunit 2##AK124438|C3orf18|51161|chromosome 3 open reading frame 18##AK311093|C3orf18|51161|chromosome 3 open reading frame 18##BC034766|C3orf18|51161|chromosome 3 open reading frame 18##AK313128|C3orf18|51161|chromosome 3 open reading frame 18##AK308074|C3orf18|51161|chromosome 3 open reading frame 18##AK309486|C3orf18|51161|chromosome 3 open reading frame 18##AL833938|C3orf18|51161|chromosome 3 open reading frame 18##AK130227|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171740|C3orf18|51161|chromosome 3 open reading frame 18##NM_001171743|C3orf18|51161|chromosome 3 open reading frame 18##NM_016210|C3orf18|51161|chromosome 3 open reading frame 18##BX537562|HEMK1|51409|HemK methyltransferase family member 1##NM_016173|HEMK1|51409|HemK methyltransferase family member 1##AK314023|HEMK1|51409|HemK methyltransferase family member 1##AF172244|HEMK1|51409|HemK methyltransferase family member 1##AK124369|HEMK1|51409|HemK methyltransferase family member 1	0.046186	
chr3	72570054	72570126	reg1034325.p1	3.400	+	AF182069 AY349131 AF333025 BC069395 BC096695 BC098110 BC098162 NM_001126128 NM_021935	-735819	-	AK313656 NM_173359	-766167	-	TSC_hg19_v1_chr3_-_71803513 NM_001134649	-766568	-	TSC_hg19_v1_chr3_-_72897563 BC039830 BC047879 AK092962	327458	-	BC017274 TSC_hg19_v1_chr3_-_72897575	327485	-	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	327502	-	AF182069|PROK2|60675|prokineticin 2##AY349131|PROK2|60675|prokineticin 2##AF333025|PROK2|60675|prokineticin 2##BC069395|PROK2|60675|prokineticin 2##BC096695|PROK2|60675|prokineticin 2##BC098110|PROK2|60675|prokineticin 2##BC098162|PROK2|60675|prokineticin 2##NM_001126128|PROK2|60675|prokineticin 2##NM_021935|PROK2|60675|prokineticin 2##AK313656|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_173359|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134649|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##BC039830|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC047879|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK092962|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)	0.0	
chr5	116040451	116040631	reg1026971.p1	3.400	+	TSC_hg19_v1_chr5_-_115910520 AF279656 NM_020796 BC032619	-130027	-	TSC_hg19_v1_chr5_+_115898220 D28352	-142317	+	TSC_hg19_v1_chr5_+_115420731 AK002147 AF161423 AF078857 BC005179 NM_016144 AY542165 CU675029	-619820	+	TSC_hg19_v1_chr5_-_118324243 BC114508 BC114955 AK091296 AX746901 NM_173666	2283697	-	TSC_hg19_v1_chr5_+_118406803 AB593142 BC028004	2366270	+	TSC_hg19_v1_chr5_+_118407076 NM_005509 AJ005821 BC144537 BC150616 BC171784 AB385168	2366624	+	AF279656|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##NM_020796|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##BC032619|SEMA6A|57556|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A##AK002147|COMMD10|51397|COMM domain containing 10##AF161423|COMMD10|51397|COMM domain containing 10##AF078857|COMMD10|51397|COMM domain containing 10##BC005179|COMMD10|51397|COMM domain containing 10##NM_016144|COMMD10|51397|COMM domain containing 10##AY542165|COMMD10|51397|COMM domain containing 10##BC114508|DTWD2|285605|DTW domain containing 2##BC114955|DTWD2|285605|DTW domain containing 2##AK091296|DTWD2|285605|DTW domain containing 2##NM_173666|DTWD2|285605|DTW domain containing 2##AB593142|DMXL1|1657|Dmx-like 1##BC028004|DMXL1|1657|Dmx-like 1##NM_005509|DMXL1|1657|Dmx-like 1##AJ005821|DMXL1|1657|Dmx-like 1##BC144537|DMXL1|1657|Dmx-like 1##BC150616|DMXL1|1657|Dmx-like 1##BC171784|DMXL1|1657|Dmx-like 1	0.0	
chr6	106546812	106546912	reg1036717.p2	3.400	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	-58	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	-12627	+	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	-12666	+	BC002699 TSC_hg19_v1_chr6_-_106773313	226446	-	TSC_hg19_v1_chr6_-_106773534 BX537904 AK315800	226670	-	TSC_hg19_v1_chr6_-_106773659 CR749386 BC093011 AK001899 Y11588 AK299577 NM_004849	226801	-	AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##BC002699|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BX537904|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK315800|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##CR749386|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##BC093011|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK001899|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##Y11588|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##AK299577|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)##NM_004849|ATG5|9474|ATG5 autophagy related 5 homolog (S. cerevisiae)	0.0	
chr6	161657290	161657433	reg1037803.p1	3.400	+	AK094629 TSC_hg19_v1_chr6_-_161413451	-243948	-	TSC_hg19_v1_chr6_+_161412887 BC136276 BC143735 BC143743 BC143750 AK307866	-244503	+	TSC_hg19_v1_chr6_+_161412815 AF002715 NM_005922 NM_006724	-244547	+	TSC_hg19_v1_chr6_-_161695027 AK295826 AF156776 AY358506 BC020209 AK295548 AK295025 CR627395 AJ420473 AK299721 AK074208 AK297636 NM_020133	37699	-	AK057286 NM_001080378 NM_152410 BC044227	1490808	+	GU345838 GU345839 GU345840 GU361466 GU361467 GU361468 GU361469 GU361470 TSC_hg19_v1_chr6_-_163148736	1491366	-	BC136276|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143735|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143743|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##BC143750|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK307866|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AF002715|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_005922|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##NM_006724|MAP3K4|4216|mitogen-activated protein kinase kinase kinase 4##AK295826|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AF156776|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AY358506|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##BC020209|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295548|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK295025|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##CR627395|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AJ420473|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK299721|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK074208|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK297636|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##NM_020133|AGPAT4|56895|1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)##AK057286|PACRG|135138|PARK2 co-regulated##NM_001080378|PACRG|135138|PARK2 co-regulated##NM_152410|PACRG|135138|PARK2 co-regulated##BC044227|PACRG|135138|PARK2 co-regulated##GU345838|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345839|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU345840|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361466|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361467|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361468|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361469|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)##GU361470|PARK2|5071|parkinson protein 2, E3 ubiquitin protein ligase (parkin)	0.0	
chr6	52098909	52099089	reg1003458.p1	3.400	+	NM_002190 U32659 BC066251 BC066252 BC066253 BC067503 BC067504 BC067505 Z58820 AB590712 CU688116	-47793	+	AF480064 TSC_hg19_v1_chr6_-_51952394 AY092083 AY074797 NM_138694 NM_170724	-146604	-	NM_003221 BC037225 AK291172 AK313749 AB528472 X95694 DQ891443 DQ894621	-1312464	+	AF384857 JF305974 AB590713 BC070124 NM_052872	10262	-	AB528319 DQ893654 DQ895840 TSC_hg19_v1_chr6_-_52149506 AK312928 AK300754 X62153 AY032603	50492	-	AK222586 TSC_hg19_v1_chr6_-_52149520 BC001626 BC003509	50521	-	NM_002190|IL17A|3605|interleukin 17A##U32659|IL17A|3605|interleukin 17A##BC066251|IL17A|3605|interleukin 17A##BC066252|IL17A|3605|interleukin 17A##BC066253|IL17A|3605|interleukin 17A##BC067503|IL17A|3605|interleukin 17A##BC067504|IL17A|3605|interleukin 17A##BC067505|IL17A|3605|interleukin 17A##Z58820|IL17A|3605|interleukin 17A##AF480064|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY092083|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##AY074797|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_138694|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_170724|PKHD1|5314|polycystic kidney and hepatic disease 1 (autosomal recessive)##NM_003221|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##BC037225|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK291172|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AK313749|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##X95694|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ891443|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##DQ894621|TFAP2B|7021|transcription factor AP-2 beta (activating enhancer binding protein 2 beta)##AF384857|IL17F|112744|interleukin 17F##JF305974|IL17F|112744|interleukin 17F##BC070124|IL17F|112744|interleukin 17F##NM_052872|IL17F|112744|interleukin 17F##DQ893654|MCM3|4172|minichromosome maintenance complex component 3##DQ895840|MCM3|4172|minichromosome maintenance complex component 3##AK312928|MCM3|4172|minichromosome maintenance complex component 3##AK300754|MCM3|4172|minichromosome maintenance complex component 3##X62153|MCM3|4172|minichromosome maintenance complex component 3##AY032603|MCM3|4172|minichromosome maintenance complex component 3##AK222586|MCM3|4172|minichromosome maintenance complex component 3##BC001626|MCM3|4172|minichromosome maintenance complex component 3##BC003509|MCM3|4172|minichromosome maintenance complex component 3	0.0	
chrX	7028956	7029108	reg1039333.p1	3.400	+	AF167078 AF167079 NM_016379	-575874	-	AK055471 BC034018 NM_181332	-882352	-	AB033086 AF376803 AX773938 NM_020742	-883145	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	36919	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	37160	-	NM_000351 M16505 J04964 AK314034	108469	+	AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_000351|STS|412|steroid sulfatase (microsomal), isozyme S##M16505|STS|412|steroid sulfatase (microsomal), isozyme S##J04964|STS|412|steroid sulfatase (microsomal), isozyme S##AK314034|STS|412|steroid sulfatase (microsomal), isozyme S	0.0	
chr10	131676215	131676334	reg1033382.p1	3.399	+	TSC_hg19_v1_chr10_+_131265507 BC000824	-410760	+	NM_002412 TSC_hg19_v1_chr10_+_131265475 AK293593 M29971	-410803	+	NM_001145966 NM_002417 X65550 X65551 TSC_hg19_v1_chr10_-_129924589	-1751746	-	AL832828 AB527459 HQ258299 BC126130 BC130479 NM_001005463	85779	-	TSC_hg19_v1_chr10_-_131762539 AK097335	86251	-	TSC_hg19_v1_chr10_-_131909090 EU250747 AK094118	232807	-	BC000824|MGMT|4255|O-6-methylguanine-DNA methyltransferase##NM_002412|MGMT|4255|O-6-methylguanine-DNA methyltransferase##AK293593|MGMT|4255|O-6-methylguanine-DNA methyltransferase##M29971|MGMT|4255|O-6-methylguanine-DNA methyltransferase##NM_001145966|MKI67|4288|antigen identified by monoclonal antibody Ki-67##NM_002417|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65550|MKI67|4288|antigen identified by monoclonal antibody Ki-67##X65551|MKI67|4288|antigen identified by monoclonal antibody Ki-67##AL832828|EBF3|253738|early B-cell factor 3##HQ258299|EBF3|253738|early B-cell factor 3##BC126130|EBF3|253738|early B-cell factor 3##BC130479|EBF3|253738|early B-cell factor 3##NM_001005463|EBF3|253738|early B-cell factor 3##AK097335|EBF3|253738|early B-cell factor 3##EU250747|LOC387723|387723|uncharacterized LOC387723##AK094118|LOC387723|387723|uncharacterized LOC387723	0.921842	CTCF.p2:-35:0.909
chr10	22890151	22890276	reg1034120.p1	3.399	+	TSC_hg19_v1_chr10_+_22726003 AK295718	-164214	+	NM_001253854 NM_001253855 NM_012443 NM_172242 TSC_hg19_v1_chr10_+_22634449 AK302194 AF079363 AK310247 AK289903 AL080136 BC030585 AM392674 AM392698 AB527223 DQ890916 DQ894067 CR533552	-255757	+	NM_005180 BC011652 TSC_hg19_v1_chr10_+_22610179 L13689	-280048	+	AK294817 TSC_hg19_v1_chr10_-_23003038	112824	-	TSC_hg19_v1_chr10_-_23003504 BC018034 NM_005028	113277	-	NM_173081 BC039312 AK302985 AY436643 AK302104 AK057389	326768	+	AK295718|LOC100289455|100289455|uncharacterized LOC100289455##NM_001253854|SPAG6|9576|sperm associated antigen 6##NM_001253855|SPAG6|9576|sperm associated antigen 6##NM_012443|SPAG6|9576|sperm associated antigen 6##NM_172242|SPAG6|9576|sperm associated antigen 6##AK302194|SPAG6|9576|sperm associated antigen 6##AF079363|SPAG6|9576|sperm associated antigen 6##AK310247|SPAG6|9576|sperm associated antigen 6##AK289903|SPAG6|9576|sperm associated antigen 6##AL080136|SPAG6|9576|sperm associated antigen 6##BC030585|SPAG6|9576|sperm associated antigen 6##AM392674|SPAG6|9576|sperm associated antigen 6##AM392698|SPAG6|9576|sperm associated antigen 6##DQ890916|SPAG6|9576|sperm associated antigen 6##DQ894067|SPAG6|9576|sperm associated antigen 6##CR533552|SPAG6|9576|sperm associated antigen 6##NM_005180|BMI1|648|BMI1 polycomb ring finger oncogene##BC011652|BMI1|648|BMI1 polycomb ring finger oncogene##L13689|BMI1|648|BMI1 polycomb ring finger oncogene##AK294817|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##BC018034|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_005028|PIP4K2A|5305|phosphatidylinositol-5-phosphate 4-kinase, type II, alpha##NM_173081|ARMC3|219681|armadillo repeat containing 3##BC039312|ARMC3|219681|armadillo repeat containing 3##AK302985|ARMC3|219681|armadillo repeat containing 3##AY436643|ARMC3|219681|armadillo repeat containing 3##AK302104|ARMC3|219681|armadillo repeat containing 3##AK057389|ARMC3|219681|armadillo repeat containing 3	0.0	
chr1	12123021	12123087	reg1040133.p1	3.399	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-43484	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-43520	+	FJ618905 NM_021933	-43756	+	M83554 NM_001243 BC136400 BC171762 S75768	490	+	D86042 BC063482 NM_152942 BC073839 BC141804	62962	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	104007	+	AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr11	2554373	2554524	reg1000269.p2	3.399	+	TSC_hg19_v1_chr11_+_2466237 AF000571 NM_000218 EF010934 AB464057 AY114213 U86146	-88199	+	AJ270996 BC093787 BC093789 BC143351 BC143353 AF177473 NM_014555	-110191	-	AF125568 NM_005706	-130926	+	BC007733 TSC_hg19_v1_chr11_-_2560881	6399	-	AK123073 TSC_hg19_v1_chr11_-_2721223	166777	-	U22398 BC039188 NM_000076 NM_001122630 NM_001122631 TSC_hg19_v1_chr11_-_2907004 BC067842	352546	-	AF000571|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##NM_000218|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##EF010934|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AY114213|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##U86146|KCNQ1|3784|potassium voltage-gated channel, KQT-like subfamily, member 1##AJ270996|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093787|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC093789|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143351|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##BC143353|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF177473|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##NM_014555|TRPM5|29850|transient receptor potential cation channel, subfamily M, member 5##AF125568|TSSC4|10078|tumor suppressing subtransferable candidate 4##NM_005706|TSSC4|10078|tumor suppressing subtransferable candidate 4##AK123073|KCNQ1OT1|10984|KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)##U22398|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC039188|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_000076|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122630|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##NM_001122631|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)##BC067842|CDKN1C|1028|cyclin-dependent kinase inhibitor 1C (p57, Kip2)	0.0	
chr12	110809661	110809728	reg1024725.p2	3.399	+	TSC_hg19_v1_chr12_+_110719528 M23114 BC035588 M23115 CU690124	-90326	+	TSC_hg19_v1_chr12_+_110719041 NM_001681 NM_170665	-90659	+	NM_001143779 NM_014055 NM_031473 TSC_hg19_v1_chr12_+_110562218 AF139540 AF332010 BC005396 AK291043 BC004536	-247473	+	TSC_hg19_v1_chr12_-_110841470 BC098264 BC098295 BC098362 BC099732 BC111798 AF191340 BC148236 BC040130	31745	-	TSC_hg19_v1_chr12_-_110841526 BC141848 AK021809 NM_001137664 NM_016238	31817	-	TSC_hg19_v1_chr12_-_110888079 AF006086	78391	-	M23114|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##BC035588|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##M23115|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_001681|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_170665|ATP2A2|488|ATPase, Ca++ transporting, cardiac muscle, slow twitch 2##NM_001143779|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_014055|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##NM_031473|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF139540|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AF332010|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC005396|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##AK291043|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC004536|IFT81|28981|intraflagellar transport 81 homolog (Chlamydomonas)##BC098264|ANAPC7|51434|anaphase promoting complex subunit 7##BC098295|ANAPC7|51434|anaphase promoting complex subunit 7##BC098362|ANAPC7|51434|anaphase promoting complex subunit 7##BC099732|ANAPC7|51434|anaphase promoting complex subunit 7##BC111798|ANAPC7|51434|anaphase promoting complex subunit 7##AF191340|ANAPC7|51434|anaphase promoting complex subunit 7##BC148236|ANAPC7|51434|anaphase promoting complex subunit 7##BC040130|ANAPC7|51434|anaphase promoting complex subunit 7##BC141848|ANAPC7|51434|anaphase promoting complex subunit 7##AK021809|ANAPC7|51434|anaphase promoting complex subunit 7##NM_001137664|ANAPC7|51434|anaphase promoting complex subunit 7##NM_016238|ANAPC7|51434|anaphase promoting complex subunit 7##AF006086|ARPC3|10094|actin related protein 2/3 complex, subunit 3, 21kDa	0.0	
chr13	33725137	33725205	reg1035132.p2	3.399	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	-134648	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-564488	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-564532	+	AY082590 BC046563 NM_001243466 NM_178007	35044	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	54993	-	AY366448 AY082589 AY082592 AK312888 AK308430 NM_178006	134696	-	AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY366448|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082589|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082592|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK312888|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK308430|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178006|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr14	76950874	76950980	reg1040801.p1	3.399	+	NM_004452	-113238	+	AK000696 TSC_hg19_v1_chr14_+_76618289	-332621	+	TSC_hg19_v1_chr14_+_76618279 AB032978	-332650	+	TSC_hg19_v1_chr14_+_77227817 AK094330	276873	+	TSC_hg19_v1_chr14_+_77228562 NM_014909 AL832588 BC009031 AB028959	277528	+	BC051896 TSC_hg19_v1_chr14_+_77229090 AK291377 CU690882	278125	+	NM_004452|ESRRB|2103|estrogen-related receptor beta##AK000696|C14orf118|55668|chromosome 14 open reading frame 118##AB032978|C14orf118|55668|chromosome 14 open reading frame 118##NM_014909|VASH1|22846|vasohibin 1##AL832588|VASH1|22846|vasohibin 1##BC009031|VASH1|22846|vasohibin 1##AB028959|VASH1|22846|vasohibin 1##BC051896|VASH1|22846|vasohibin 1##AK291377|VASH1|22846|vasohibin 1	0.04615	
chr15	25746953	25747074	reg1015041.p1	3.399	+	TSC_hg19_v1_chr15_-_25684163 NM_000462 NM_130839 AF002224	-62835	-	TSC_hg19_v1_chr15_-_25684136 BC002582 AK056239	-62912	-	L07557 NM_130838	-96364	-	TSC_hg19_v1_chr15_-_26108463 EU831492 EU831579 NM_024490 BC052251	361340	-	AB051358 TSC_hg19_v1_chr15_-_26108932	361887	-	AK295167 NM_001191321 TSC_hg19_v1_chr15_-_26874238 BC038837	1127267	-	NM_000462|UBE3A|7337|ubiquitin protein ligase E3A##NM_130839|UBE3A|7337|ubiquitin protein ligase E3A##AF002224|UBE3A|7337|ubiquitin protein ligase E3A##BC002582|UBE3A|7337|ubiquitin protein ligase E3A##AK056239|UBE3A|7337|ubiquitin protein ligase E3A##L07557|UBE3A|7337|ubiquitin protein ligase E3A##NM_130838|UBE3A|7337|ubiquitin protein ligase E3A##EU831492|ATP10A|57194|ATPase, class V, type 10A##EU831579|ATP10A|57194|ATPase, class V, type 10A##NM_024490|ATP10A|57194|ATPase, class V, type 10A##BC052251|ATP10A|57194|ATPase, class V, type 10A##AB051358|ATP10A|57194|ATPase, class V, type 10A##AK295167|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3##NM_001191321|GABRB3|2562|gamma-aminobutyric acid (GABA) A receptor, beta 3	0.0	
chr15	82732572	82732750	reg1016038.p2	3.399	+	NM_198181 CR936812	-10445	+	TSC_hg19_v1_chr15_+_82647308 BC066934	-85330	+	NM_001164465	-90956	-	BC009407 BC071928 M13932 AB055777 AK311951 BC070222 BC022370 NM_001021 NM_001199057 BC062715	92232	-	AK309746 AK310769 BC072390 TSC_hg19_v1_chr15_+_82944804 AK291684 AK309420 AK309732 AK307285	212131	+	BC007811 TSC_hg19_v1_chr15_+_82944831 BC065260 AK311124 AK311170 AK026448	212229	+	NM_198181|GOLGA6L9|440295|golgin A6 family-like 9##CR936812|GOLGA6L9|440295|golgin A6 family-like 9##BC066934|UBE2Q2P2|100134869|ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 2##NM_001164465|GOLGA6L10|647042|golgin A6 family-like 10##BC009407|RPS17|6218|ribosomal protein S17##BC071928|RPS17|6218|ribosomal protein S17##M13932|RPS17|6218|ribosomal protein S17##AK311951|RPS17|6218|ribosomal protein S17##BC070222|RPS17|6218|ribosomal protein S17##BC022370|RPS17|6218|ribosomal protein S17##NM_001021|RPS17|6218|ribosomal protein S17##NM_001199057|RPS17L|100505503|ribosomal protein S17-like##BC062715|RPS17|6218|ribosomal protein S17##AK309746|AGSK1|80154|golgin subfamily A member 2-like##AK310769|AGSK1|80154|golgin subfamily A member 2-like##BC072390|AGSK1|80154|golgin subfamily A member 2-like##AK291684|AGSK1|80154|golgin subfamily A member 2-like##AK309420|AGSK1|80154|golgin subfamily A member 2-like##AK309732|AGSK1|80154|golgin subfamily A member 2-like##AK307285|AGSK1|80154|golgin subfamily A member 2-like##BC007811|AGSK1|80154|golgin subfamily A member 2-like##BC065260|AGSK1|80154|golgin subfamily A member 2-like##AK311124|AGSK1|80154|golgin subfamily A member 2-like##AK311170|AGSK1|80154|golgin subfamily A member 2-like##AK026448|AGSK1|80154|golgin subfamily A member 2-like	0.45582	CTCF.p2:-45:0.267
chr1	9776548	9776615	reg1045233.p1	3.399	+	TSC_hg19_v1_chr1_+_9711801 AK314191 NM_005026 U86453 Y10055 BC030263	-64777	+	BC137291 NM_001010866 NM_001130924 TSC_hg19_v1_chr1_+_9648968 BC121187	-127625	+	TSC_hg19_v1_chr1_+_9599547 BC004991 AF495714	-176945	+	AB587312 AY753301 DQ891263 DQ894450 AK289798 TSC_hg19_v1_chr1_-_9883992	107314	-	TSC_hg19_v1_chr1_-_9884023 AK304813	107440	-	TSC_hg19_v1_chr1_-_9884024 BC033902	107463	-	AK314191|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##NM_005026|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##U86453|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##Y10055|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC030263|PIK3CD|5293|phosphoinositide-3-kinase, catalytic, delta polypeptide##BC137291|TMEM201|199953|transmembrane protein 201##NM_001010866|TMEM201|199953|transmembrane protein 201##NM_001130924|TMEM201|199953|transmembrane protein 201##BC121187|TMEM201|199953|transmembrane protein 201##BC004991|SLC25A33|84275|solute carrier family 25, member 33##AF495714|SLC25A33|84275|solute carrier family 25, member 33##AY753301|CLSTN1|22883|calsyntenin 1##DQ891263|CLSTN1|22883|calsyntenin 1##DQ894450|CLSTN1|22883|calsyntenin 1##AK289798|CLSTN1|22883|calsyntenin 1##AK304813|CLSTN1|22883|calsyntenin 1##BC033902|CLSTN1|22883|calsyntenin 1	0.0	
chr22	48494205	48494385	reg1039595.p1	3.399	+	AK093107 BC039485 TSC_hg19_v1_chr22_+_48027549	-466792	+	NM_014346 TSC_hg19_v1_chr22_+_47158546 AK055591 AK301445 BC029897 AK315779 BC002743 BC020976 BC001292 AK308039 CR456412 CU012972 CU013260 AB587482 CU678158 AB449908	-1335695	+	TSC_hg19_v1_chr22_-_47134170 NM_022766 AB079066	-1360140	-	TSC_hg19_v1_chr22_+_48885255 NM_001082967 BC039396 AF131851	390985	+	AK125256 NM_015381 AK123443 AY358847	477866	+	AK124962 TSC_hg19_v1_chr22_-_50051168 BC033837 BC048207	1556838	-	AK093107|LOC284930|284930|uncharacterized LOC284930##NM_014346|TBC1D22A|25771|TBC1 domain family, member 22A##AK055591|TBC1D22A|25771|TBC1 domain family, member 22A##AK301445|TBC1D22A|25771|TBC1 domain family, member 22A##BC029897|TBC1D22A|25771|TBC1 domain family, member 22A##AK315779|TBC1D22A|25771|TBC1 domain family, member 22A##BC002743|TBC1D22A|25771|TBC1 domain family, member 22A##BC020976|TBC1D22A|25771|TBC1 domain family, member 22A##BC001292|TBC1D22A|25771|TBC1 domain family, member 22A##AK308039|TBC1D22A|25771|TBC1 domain family, member 22A##CR456412|TBC1D22A|25771|TBC1 domain family, member 22A##CU012972|TBC1D22A|25771|TBC1 domain family, member 22A##CU013260|TBC1D22A|25771|TBC1 domain family, member 22A##AB449908|TBC1D22A|25771|TBC1 domain family, member 22A##NM_022766|CERK|64781|ceramide kinase##AB079066|CERK|64781|ceramide kinase##NM_001082967|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##BC039396|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AF131851|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK125256|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##NM_015381|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK123443|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AY358847|FAM19A5|25817|family with sequence similarity 19 (chemokine (C-C motif)-like), member A5##AK124962|C22orf34|348645|chromosome 22 open reading frame 34##BC048207|C22orf34|348645|chromosome 22 open reading frame 34	0.0	
chr3	156392331	156392511	reg1000590.p3	3.399	+	AK291261 TSC_hg19_v1_chr3_+_156392402 BX537965 BC050350	-19	+	NM_015508	-217	+	TSC_hg19_v1_chr3_-_156272919 AF087907 AF110647 BC017203 NM_007107	-119478	-	CR749647 NM_001184717	293	+	AK097785 TSC_hg19_v1_chr3_+_156393472	994	+	BC034397 NM_001184718	2031	+	AK291261|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BX537965|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BC050350|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_015508|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AF087907|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##AF110647|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##BC017203|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##NM_007107|SSR3|6747|signal sequence receptor, gamma (translocon-associated protein gamma)##CR749647|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184717|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##AK097785|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##BC034397|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase##NM_001184718|TIPARP|25976|TCDD-inducible poly(ADP-ribose) polymerase	0.0	
chr4	13861835	13861968	reg1043404.p1	3.399	+	TSC_hg19_v1_chr4_-_13629350 BC065546 BC043603 AF528529 NM_148894 BC087835	-232584	-	TSC_hg19_v1_chr4_-_13549425 BC035174 AK058104 BC048110 BC053955	-312487	-	AB463932 AF009801 EU446467 BC111966 NM_001189	-315826	-	BC039114 BC044764 BC047127 TSC_hg19_v1_chr4_-_15003743	1141808	-	TSC_hg19_v1_chr4_-_15003933 BC113724 BC113726	1142094	-	NM_001177381 NM_001177382 NM_001177383 NM_001177384 NM_182485 NM_182646	1142396	+	BC065546|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC043603|BOD1L|259282|biorientation of chromosomes in cell division 1-like##AF528529|BOD1L|259282|biorientation of chromosomes in cell division 1-like##NM_148894|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC087835|BOD1L|259282|biorientation of chromosomes in cell division 1-like##BC035174|LOC285548|285548|uncharacterized LOC285548##AK058104|LOC285548|285548|uncharacterized LOC285548##BC048110|LOC285548|285548|uncharacterized LOC285548##BC053955|LOC285548|285548|uncharacterized LOC285548##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2##BC039114|LOC441009|441009|uncharacterized LOC441009##BC044764|LOC441009|441009|uncharacterized LOC441009##BC047127|LOC441009|441009|uncharacterized LOC441009##BC113724|LOC441009|441009|uncharacterized LOC441009##BC113726|LOC441009|441009|uncharacterized LOC441009##NM_001177381|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177382|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177383|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_001177384|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182485|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2##NM_182646|CPEB2|132864|cytoplasmic polyadenylation element binding protein 2	0.615508	CTCF.p2:-21:0.616
chr5	172234403	172234584	reg1039496.p2	3.399	+	TSC_hg19_v1_chr5_-_172198199 X68277 AK300487 AK298047 AK298658 AK304475 AK316321 BC022463 NM_004417 AK299391	-36282	-	AF275799 TSC_hg19_v1_chr5_-_172083715	-150850	-	TSC_hg19_v1_chr5_+_172068273 GQ414757 GQ414758 GQ414759 NM_001142651	-166240	+	TSC_hg19_v1_chr5_+_172261253 NM_001031711 AB033007 BC012766 BC014490 AB463606	26825	+	BC017360 NM_016093 AF083248 BC009766 BC070192 AK128872	151955	+	NM_003945 TSC_hg19_v1_chr5_+_172410801 BC119715 BC119714 AK312068 Y15286	176289	+	X68277|DUSP1|1843|dual specificity phosphatase 1##AK300487|DUSP1|1843|dual specificity phosphatase 1##AK298047|DUSP1|1843|dual specificity phosphatase 1##AK298658|DUSP1|1843|dual specificity phosphatase 1##AK304475|DUSP1|1843|dual specificity phosphatase 1##AK316321|DUSP1|1843|dual specificity phosphatase 1##BC022463|DUSP1|1843|dual specificity phosphatase 1##NM_004417|DUSP1|1843|dual specificity phosphatase 1##AK299391|DUSP1|1843|dual specificity phosphatase 1##GQ414757|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414758|NEURL1B|54492|neuralized homolog 1B (Drosophila)##GQ414759|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001142651|NEURL1B|54492|neuralized homolog 1B (Drosophila)##NM_001031711|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##AB033007|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC012766|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC014490|ERGIC1|57222|endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1##BC017360|RPL26L1|51121|ribosomal protein L26-like 1##NM_016093|RPL26L1|51121|ribosomal protein L26-like 1##AF083248|RPL26L1|51121|ribosomal protein L26-like 1##BC009766|RPL26L1|51121|ribosomal protein L26-like 1##BC070192|RPL26L1|51121|ribosomal protein L26-like 1##AK128872|RPL26L1|51121|ribosomal protein L26-like 1##NM_003945|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119715|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##BC119714|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##AK312068|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1##Y15286|ATP6V0E1|8992|ATPase, H+ transporting, lysosomal 9kDa, V0 subunit e1	0.0	
chr5	55401777	55401903	reg1040043.p2	3.399	+	TSC_hg19_v1_chr5_-_55290783 BC071555 M57230 NM_001190981 NM_002184 NM_175767	-111077	-	NM_001242636 NM_001242639	-252691	+	AY358740 NM_001242637 NM_001242638 NM_139017 AK297938 AY499342 AY499339 AY499340 AY499341	-254571	+	AK123389 NM_024669	127345	-	NM_005921	709059	+	TSC_hg19_v1_chr5_+_56111375 AK307828	709524	+	BC071555|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##M57230|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001190981|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_002184|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_175767|IL6ST|3572|interleukin 6 signal transducer (gp130, oncostatin M receptor)##NM_001242636|IL31RA|133396|interleukin 31 receptor A##NM_001242639|IL31RA|133396|interleukin 31 receptor A##AY358740|IL31RA|133396|interleukin 31 receptor A##NM_001242637|IL31RA|133396|interleukin 31 receptor A##NM_001242638|IL31RA|133396|interleukin 31 receptor A##NM_139017|IL31RA|133396|interleukin 31 receptor A##AK297938|IL31RA|133396|interleukin 31 receptor A##AY499342|IL31RA|133396|interleukin 31 receptor A##AY499339|IL31RA|133396|interleukin 31 receptor A##AY499340|IL31RA|133396|interleukin 31 receptor A##AY499341|IL31RA|133396|interleukin 31 receptor A##AK123389|ANKRD55|79722|ankyrin repeat domain 55##NM_024669|ANKRD55|79722|ankyrin repeat domain 55##NM_005921|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1##AK307828|MAP3K1|4214|mitogen-activated protein kinase kinase kinase 1	0.0	
chr6	41700658	41700815	reg1034330.p1	3.399	+	AJ608793 AJ608794 AJ608792 TSC_hg19_v1_chr6_-_41673723	-27035	-	TSC_hg19_v1_chr6_+_41606198 NM_005586 AK290735 BC007836 U78313	-94514	+	TSC_hg19_v1_chr6_+_41514342 BC052803	-186399	+	TSC_hg19_v1_chr6_-_41702787 AJ608787 BC032448 NM_007162	2029	-	M33782 TSC_hg19_v1_chr6_-_41703347	2610	-	TSC_hg19_v1_chr6_-_41703962 AK298390 AJ608786 NM_001167827	3236	-	AJ608793|TFEB|7942|transcription factor EB##AJ608794|TFEB|7942|transcription factor EB##AJ608792|TFEB|7942|transcription factor EB##NM_005586|MDFI|4188|MyoD family inhibitor##AK290735|MDFI|4188|MyoD family inhibitor##BC007836|MDFI|4188|MyoD family inhibitor##U78313|MDFI|4188|MyoD family inhibitor##BC052803|FOXP4|116113|forkhead box P4##AJ608787|TFEB|7942|transcription factor EB##BC032448|TFEB|7942|transcription factor EB##NM_007162|TFEB|7942|transcription factor EB##M33782|TFEB|7942|transcription factor EB##AK298390|TFEB|7942|transcription factor EB##AJ608786|TFEB|7942|transcription factor EB##NM_001167827|TFEB|7942|transcription factor EB	0.0	
chr7	92250674	92250800	reg1008834.p2	3.399	+	TSC_hg19_v1_chr7_-_92219705 BC079834 BC090868 BC057771 AK125498 AL833918 BC017874 NM_001040057 NM_152789 BC062706	-31039	-	TSC_hg19_v1_chr7_-_92219660 BC032461 BC157872	-31095	-	BC104865 BC104867 BC143576 NM_032120 CR933641 BC044570 AL136619 BC020919 BC033561 CR936726 AK294626 AK294812 AF161422 BC065716 CR533549	-92631	+	AB528631 CU690894 X66365 TSC_hg19_v1_chr7_-_92462894	212030	-	BC052264 TSC_hg19_v1_chr7_-_92463219 NM_001259	212483	-	AK313491 TSC_hg19_v1_chr7_-_92465884	215161	-	BC090868|FAM133B|257415|family with sequence similarity 133, member B##BC057771|FAM133B|257415|family with sequence similarity 133, member B##AK125498|FAM133B|257415|family with sequence similarity 133, member B##AL833918|FAM133B|257415|family with sequence similarity 133, member B##BC017874|FAM133B|257415|family with sequence similarity 133, member B##NM_001040057|FAM133B|257415|family with sequence similarity 133, member B##NM_152789|FAM133B|257415|family with sequence similarity 133, member B##BC062706|FAM133B|257415|family with sequence similarity 133, member B##BC032461|FAM133B|257415|family with sequence similarity 133, member B##BC157872|FAM133B|257415|family with sequence similarity 133, member B##BC104865|RBM48|84060|RNA binding motif protein 48##BC104867|RBM48|84060|RNA binding motif protein 48##BC143576|RBM48|84060|RNA binding motif protein 48##NM_032120|RBM48|84060|RNA binding motif protein 48##CR933641|RBM48|84060|RNA binding motif protein 48##BC044570|RBM48|84060|RNA binding motif protein 48##AL136619|RBM48|84060|RNA binding motif protein 48##BC020919|RBM48|84060|RNA binding motif protein 48##BC033561|RBM48|84060|RNA binding motif protein 48##CR936726|RBM48|84060|RNA binding motif protein 48##AK294626|RBM48|84060|RNA binding motif protein 48##AK294812|RBM48|84060|RNA binding motif protein 48##AF161422|RBM48|84060|RNA binding motif protein 48##BC065716|RBM48|84060|RNA binding motif protein 48##CR533549|RBM48|84060|RNA binding motif protein 48##X66365|CDK6|1021|cyclin-dependent kinase 6##BC052264|CDK6|1021|cyclin-dependent kinase 6##NM_001259|CDK6|1021|cyclin-dependent kinase 6##AK313491|CDK6|1021|cyclin-dependent kinase 6	0.0	
chr9	131549078	131549145	reg1028156.p1	3.399	+	TSC_hg19_v1_chr9_-_131534207 BC052563 NM_006336	-14853	-	TSC_hg19_v1_chr9_-_131534148 AK314911 BC033884	-15094	-	CU690564 BC009280 BC048251 TSC_hg19_v1_chr9_-_131486407 AK027430 AK075332 AK315746 AK092843 AX747760 NM_032799	-62722	-	NM_018201 TSC_hg19_v1_chr9_+_131549531	409	+	TSC_hg19_v1_chr9_+_131549578 AK289777 BC150311 AK123828 BC014898 BC132817 BC136509 AK001605 BC140080 BC143010 HQ258408 AB449899	485	+	TSC_hg19_v1_chr9_+_131580758 BC016351 NM_004435 X79444 BC004922 AB590755	31728	+	BC052563|ZER1|10444|zer-1 homolog (C. elegans)##NM_006336|ZER1|10444|zer-1 homolog (C. elegans)##AK314911|ZER1|10444|zer-1 homolog (C. elegans)##BC033884|ZER1|10444|zer-1 homolog (C. elegans)##BC009280|ZDHHC12|84885|zinc finger, DHHC-type containing 12##BC048251|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK027430|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK075332|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK315746|ZDHHC12|84885|zinc finger, DHHC-type containing 12##AK092843|ZDHHC12|84885|zinc finger, DHHC-type containing 12##NM_032799|ZDHHC12|84885|zinc finger, DHHC-type containing 12##NM_018201|TBC1D13|54662|TBC1 domain family, member 13##AK289777|TBC1D13|54662|TBC1 domain family, member 13##BC150311|TBC1D13|54662|TBC1 domain family, member 13##AK123828|TBC1D13|54662|TBC1 domain family, member 13##BC014898|TBC1D13|54662|TBC1 domain family, member 13##BC132817|TBC1D13|54662|TBC1 domain family, member 13##BC136509|TBC1D13|54662|TBC1 domain family, member 13##AK001605|TBC1D13|54662|TBC1 domain family, member 13##BC140080|TBC1D13|54662|TBC1 domain family, member 13##BC143010|TBC1D13|54662|TBC1 domain family, member 13##HQ258408|TBC1D13|54662|TBC1 domain family, member 13##AB449899|TBC1D13|54662|TBC1 domain family, member 13##BC016351|ENDOG|2021|endonuclease G##NM_004435|ENDOG|2021|endonuclease G##X79444|ENDOG|2021|endonuclease G##BC004922|ENDOG|2021|endonuclease G	0.0	
chr10	91597209	91597299	reg1030909.p1	3.398	+	TSC_hg19_v1_chr10_+_91498725 AK025628	-98487	+	TSC_hg19_v1_chr10_+_91461342 AK290439 NM_016195 AY282406 BC012585 BC108688 BC058913 AL117496 BC093089 AB033337 BC046134 BC042130 AK074336	-135879	+	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	-191930	-	TSC_hg19_v1_chr10_-_92617474 AB451482 AY493988 AK292606 L21195 U68487 U68488	1020192	-	BC047526 NM_000872 NM_019859 NM_019860 TSC_hg19_v1_chr10_-_92617758	1020479	-	TSC_hg19_v1_chr10_+_92631241 BC006991	1034003	+	AK025628|KIF20B|9585|kinesin family member 20B##AK290439|KIF20B|9585|kinesin family member 20B##NM_016195|KIF20B|9585|kinesin family member 20B##AY282406|KIF20B|9585|kinesin family member 20B##BC012585|KIF20B|9585|kinesin family member 20B##BC108688|KIF20B|9585|kinesin family member 20B##BC058913|KIF20B|9585|kinesin family member 20B##AL117496|KIF20B|9585|kinesin family member 20B##BC093089|KIF20B|9585|kinesin family member 20B##AB033337|KIF20B|9585|kinesin family member 20B##BC046134|KIF20B|9585|kinesin family member 20B##BC042130|KIF20B|9585|kinesin family member 20B##AK074336|KIF20B|9585|kinesin family member 20B##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1##AB451482|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AY493988|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##AK292606|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##L21195|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68487|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##U68488|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC047526|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_000872|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019859|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##NM_019860|HTR7|3363|5-hydroxytryptamine (serotonin) receptor 7 (adenylate cyclase-coupled)##BC006991|RPP30|10556|ribonuclease P/MRP 30kDa subunit	0.0	
chr12	124979129	124979309	reg1022135.p4	3.398	+	AK126577 NM_181709	-205510	+	TSC_hg19_v1_chr12_+_124457763 AL834266 NM_001204298 NM_001204299 NM_152437 BC051696 BC037793 BX647762 AK056034	-521490	+	TSC_hg19_v1_chr12_-_124457275 AK222661 BC017186 AK026124 NM_025140	-522020	-	TSC_hg19_v1_chr12_-_125002875 BC033087	23640	-	AB209089 NM_001077261 NM_001206654 NM_006312 TSC_hg19_v1_chr12_-_125052138	72856	-	DQ892837 DQ896083 BC093732 BC112037 BC143319 Z22555 TSC_hg19_v1_chr12_-_125348344	369086	-	AK126577|FAM101A|144347|family with sequence similarity 101, member A##NM_181709|FAM101A|144347|family with sequence similarity 101, member A##AL834266|ZNF664|144348|zinc finger protein 664##NM_001204298|ZNF664|144348|zinc finger protein 664##NM_001204299|ZNF664-FAM101A|100533183|protein FAM101A##NM_152437|ZNF664|144348|zinc finger protein 664##BC051696|ZNF664|144348|zinc finger protein 664##BC037793|ZNF664|144348|zinc finger protein 664##BX647762|ZNF664|144348|zinc finger protein 664##AK056034|ZNF664|144348|zinc finger protein 664##AK222661|CCDC92|80212|coiled-coil domain containing 92##BC017186|CCDC92|80212|coiled-coil domain containing 92##AK026124|CCDC92|80212|coiled-coil domain containing 92##NM_025140|CCDC92|80212|coiled-coil domain containing 92##AB209089|NCOR2|9612|nuclear receptor corepressor 2##NM_001077261|NCOR2|9612|nuclear receptor corepressor 2##NM_001206654|NCOR2|9612|nuclear receptor corepressor 2##NM_006312|NCOR2|9612|nuclear receptor corepressor 2##DQ892837|SCARB1|949|scavenger receptor class B, member 1##DQ896083|SCARB1|949|scavenger receptor class B, member 1##BC093732|SCARB1|949|scavenger receptor class B, member 1##BC112037|SCARB1|949|scavenger receptor class B, member 1##BC143319|SCARB1|949|scavenger receptor class B, member 1##Z22555|SCARB1|949|scavenger receptor class B, member 1	0.105057	
chr12	69670996	69671128	reg1041451.p2	3.398	+	TSC_hg19_v1_chr12_+_69633357 BC005000 BC000714 X67337 AK292024 CU674352 CU678850 DQ892159 EU176688	-37673	+	NM_007007 TSC_hg19_v1_chr12_+_69633348 AK223568 AK299928	-37729	+	J04970 NM_001874 AK127859	-314043	-	TSC_hg19_v1_chr12_+_69742133 AK130149 NM_000239	71069	+	TSC_hg19_v1_chr12_+_69742163 AK310930 AK311779 J03801 FJ795023 BC004147 M21119 M19045 AB463851 DQ892271 DQ895472 U25677	71147	+	TSC_hg19_v1_chr12_+_69753535 NM_006530 U61384 AJ245746 BC000994 AK001413 AB464359 EU446926	82544	+	BC005000|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##BC000714|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##X67337|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK292024|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##DQ892159|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##EU176688|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##NM_007007|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK223568|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##AK299928|CPSF6|11052|cleavage and polyadenylation specific factor 6, 68kDa##J04970|CPM|1368|carboxypeptidase M##NM_001874|CPM|1368|carboxypeptidase M##AK127859|CPM|1368|carboxypeptidase M##AK130149|LYZ|4069|lysozyme##NM_000239|LYZ|4069|lysozyme##AK311779|LYZ|4069|lysozyme##J03801|LYZ|4069|lysozyme##FJ795023|LYZ|4069|lysozyme##BC004147|LYZ|4069|lysozyme##M21119|LYZ|4069|lysozyme##M19045|LYZ|4069|lysozyme##DQ892271|LYZ|4069|lysozyme##DQ895472|LYZ|4069|lysozyme##U25677|LYZ|4069|lysozyme##NM_006530|YEATS4|8089|YEATS domain containing 4##U61384|YEATS4|8089|YEATS domain containing 4##AJ245746|YEATS4|8089|YEATS domain containing 4##BC000994|YEATS4|8089|YEATS domain containing 4##AK001413|YEATS4|8089|YEATS domain containing 4##EU446926|YEATS4|8089|YEATS domain containing 4	0.0	
chr19	42749135	42749216	reg1019124.p2	3.398	+	TSC_hg19_v1_chr19_-_42746755 BC027984	-2417	-	TSC_hg19_v1_chr19_-_42746729 BC051865 L40027 NM_019884	-2443	-	TSC_hg19_v1_chr19_-_42746704 D63424	-2484	-	AB463618 CU692500 DQ893568 DQ896817 TSC_hg19_v1_chr19_-_42759278 BC022231 U15655	10039	-	AK300627 TSC_hg19_v1_chr19_-_42759281 AK314278 NM_006494	10130	-	TSC_hg19_v1_chr19_+_42788616 AF363689 DQ388764 NM_015125 AB527445	39554	+	BC027984|GSK3A|2931|glycogen synthase kinase 3 alpha##BC051865|GSK3A|2931|glycogen synthase kinase 3 alpha##L40027|GSK3A|2931|glycogen synthase kinase 3 alpha##NM_019884|GSK3A|2931|glycogen synthase kinase 3 alpha##D63424|GSK3A|2931|glycogen synthase kinase 3 alpha##DQ893568|ERF|2077|Ets2 repressor factor##DQ896817|ERF|2077|Ets2 repressor factor##BC022231|ERF|2077|Ets2 repressor factor##U15655|ERF|2077|Ets2 repressor factor##AK300627|ERF|2077|Ets2 repressor factor##AK314278|ERF|2077|Ets2 repressor factor##NM_006494|ERF|2077|Ets2 repressor factor##AF363689|CIC|23152|capicua homolog (Drosophila)##NM_015125|CIC|23152|capicua homolog (Drosophila)	0.98002	
chr20	9947783	9947859	reg1029421.p2	3.398	+	TSC_hg19_v1_chr20_-_9819519 AB040812 BC024179 AK291401 AK307926 AK095674 AK315820 NM_020341 NM_177990 AB033090 AX776013	-128254	-	TSC_hg19_v1_chr20_+_9495437 CU690786	-452359	+	AL121740 BC050727 TSC_hg19_v1_chr20_+_9495326	-452509	+	NM_022096 NM_198798 AK097689 TSC_hg19_v1_chr20_+_10015744 BC022878 BC028189 BC011591	67911	+	TSC_hg19_v1_chr20_+_10199575 NM_003081 NM_130811 AK094560 AK098347 D21267 AK223617 AK314359 AK289647 BC010647 BX647443 AK098767 L19760 L19761	251706	+	TSC_hg19_v1_chr20_-_10200139 AK124961	252322	-	AB040812|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##BC024179|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK291401|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK307926|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK095674|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK315820|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_020341|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_177990|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AB033090|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AX776013|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AL121740|LAMP5|24141|lysosomal-associated membrane protein family, member 5##BC050727|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_022096|ANKRD5|63926|ankyrin repeat domain 5##NM_198798|ANKRD5|63926|ankyrin repeat domain 5##AK097689|ANKRD5|63926|ankyrin repeat domain 5##BC022878|ANKRD5|63926|ankyrin repeat domain 5##BC028189|ANKRD5|63926|ankyrin repeat domain 5##BC011591|ANKRD5|63926|ankyrin repeat domain 5##NM_003081|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_130811|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK094560|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098347|SNAP25|6616|synaptosomal-associated protein, 25kDa##D21267|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK223617|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK314359|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK289647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BC010647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BX647443|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098767|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19760|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19761|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK124961|LOC100131208|100131208|uncharacterized LOC100131208	0.963487	CTCF.p2:8:0.963
chr21	45341539	45341605	reg1039117.p1	3.398	+	TSC_hg19_v1_chr21_+_45285103 NM_020132 BC011971	-56449	+	TSC_hg19_v1_chr21_+_45285029 AY358704	-56512	+	TSC_hg19_v1_chr21_+_45209457 AK223185 AK303000 AK223215 AK313116 BC000380 U79775 CU674182 DQ891391 DQ894567 BC014787	-132087	+	AK300562 NM_001037553	3706	+	TSC_hg19_v1_chr21_+_45432211 BC071569 NM_003274 U61500 BC046241 BC052247 BC094823 U19252 BC101728 AB385171 CU692332	90768	+	TSC_hg19_v1_chr21_+_45527202 AK314184	185630	+	NM_020132|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC011971|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AY358704|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##AK223185|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK303000|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK223215|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK313116|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC000380|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##U79775|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ891391|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##DQ894567|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##BC014787|RRP1|8568|ribosomal RNA processing 1 homolog (S. cerevisiae)##AK300562|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##NM_001037553|AGPAT3|56894|1-acylglycerol-3-phosphate O-acyltransferase 3##BC071569|TRAPPC10|7109|trafficking protein particle complex 10##NM_003274|TRAPPC10|7109|trafficking protein particle complex 10##U61500|TRAPPC10|7109|trafficking protein particle complex 10##BC046241|TRAPPC10|7109|trafficking protein particle complex 10##BC052247|TRAPPC10|7109|trafficking protein particle complex 10##BC094823|TRAPPC10|7109|trafficking protein particle complex 10##U19252|TRAPPC10|7109|trafficking protein particle complex 10##BC101728|TRAPPC10|7109|trafficking protein particle complex 10##AK314184|PWP2|5822|PWP2 periodic tryptophan protein homolog (yeast)	0.0	
chr2	43454565	43454745	reg1027787.p4	3.398	+	TSC_hg19_v1_chr2_-_43453744 NM_006887	-913	-	TSC_hg19_v1_chr2_-_43453736 BC020369	-925	-	TSC_hg19_v1_chr2_-_43453506 DQ893399 DQ896782 X78992 BC005010	-1310	-	TSC_hg19_v1_chr2_-_43823178 AB051554 NM_001083953 BX641038 BC037990 AL832141 AY149629 AY149630 AY149631 AY149632 AY149633 BX648155 AK290023 NM_022065	368493	-	TSC_hg19_v1_chr2_+_43864411 BC063310	409758	+	TSC_hg19_v1_chr2_+_43864441 AK126308 NM_172069 AL832207 AL833546	409784	+	NM_006887|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC020369|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ893399|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##DQ896782|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##X78992|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##BC005010|ZFP36L2|678|zinc finger protein 36, C3H type-like 2##AB051554|THADA|63892|thyroid adenoma associated##NM_001083953|THADA|63892|thyroid adenoma associated##BX641038|THADA|63892|thyroid adenoma associated##BC037990|THADA|63892|thyroid adenoma associated##AL832141|THADA|63892|thyroid adenoma associated##AY149629|THADA|63892|thyroid adenoma associated##AY149630|THADA|63892|thyroid adenoma associated##AY149631|THADA|63892|thyroid adenoma associated##AY149632|THADA|63892|thyroid adenoma associated##AY149633|THADA|63892|thyroid adenoma associated##BX648155|THADA|63892|thyroid adenoma associated##AK290023|THADA|63892|thyroid adenoma associated##NM_022065|THADA|63892|thyroid adenoma associated##BC063310|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AK126308|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##NM_172069|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL832207|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2##AL833546|PLEKHH2|130271|pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	0.015323	
chr2	47137297	47137471	reg1030518.p2	3.398	+	TSC_hg19_v1_chr2_-_47134945 M23161	-2373	-	TSC_hg19_v1_chr2_+_46926340 BC032862 AF073958 NM_144949	-210983	+	TSC_hg19_v1_chr2_+_46926049 AK290194 AK296796 AB014571 AL136896 NM_014011	-211311	+	TSC_hg19_v1_chr2_-_47142893 AF475284 BC037845	5507	-	TSC_hg19_v1_chr2_-_47142934 BC040357	5550	-	TSC_hg19_v1_chr2_-_47142939 AL833900 AF537214 CR749562	5559	-	M23161|MCFD2|90411|multiple coagulation factor deficiency 2##BC032862|SOCS5|9655|suppressor of cytokine signaling 5##AF073958|SOCS5|9655|suppressor of cytokine signaling 5##NM_144949|SOCS5|9655|suppressor of cytokine signaling 5##AK290194|SOCS5|9655|suppressor of cytokine signaling 5##AB014571|SOCS5|9655|suppressor of cytokine signaling 5##AL136896|SOCS5|9655|suppressor of cytokine signaling 5##NM_014011|SOCS5|9655|suppressor of cytokine signaling 5##AF475284|MCFD2|90411|multiple coagulation factor deficiency 2##BC037845|MCFD2|90411|multiple coagulation factor deficiency 2##BC040357|MCFD2|90411|multiple coagulation factor deficiency 2##AL833900|MCFD2|90411|multiple coagulation factor deficiency 2##AF537214|MCFD2|90411|multiple coagulation factor deficiency 2##CR749562|MCFD2|90411|multiple coagulation factor deficiency 2	0.0	
chr2	95980865	95980932	reg1013356.p1	3.398	+	TSC_hg19_v1_chr2_+_95963054 NM_013434 AB209076 AJ131730 AK095539 AK315437 BC012850 AF120102 AB528387 AF199599 AF367022 BT020075 CU680412 DQ148485 DQ892078 DQ895271 DQ895316	-17792	+	BC113877 BC114525 AK091175 AX746828 TSC_hg19_v1_chr2_+_95940239 AK290366 AK313267 AY358377 BC025736	-40664	+	TSC_hg19_v1_chr2_+_95940195 AF245303 AF245304 NM_001165977 NM_001165978 NM_144707	-40701	+	DQ148486 NM_001034914	31869	+	TSC_hg19_v1_chr2_+_96068466 AF151863 NM_016044 BC009403 BC110911	87581	+	NM_001164464	169580	-	NM_013434|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AJ131730|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK095539|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AK315437|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC012850|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF120102|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF199599|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF367022|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BT020075|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ148485|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ892078|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895271|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##DQ895316|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##BC113877|PROM2|150696|prominin 2##BC114525|PROM2|150696|prominin 2##AK091175|PROM2|150696|prominin 2##AK290366|PROM2|150696|prominin 2##AK313267|PROM2|150696|prominin 2##AY358377|PROM2|150696|prominin 2##BC025736|PROM2|150696|prominin 2##AF245303|PROM2|150696|prominin 2##AF245304|PROM2|150696|prominin 2##NM_001165977|PROM2|150696|prominin 2##NM_001165978|PROM2|150696|prominin 2##NM_144707|PROM2|150696|prominin 2##DQ148486|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##NM_001034914|KCNIP3|30818|Kv channel interacting protein 3, calsenilin##AF151863|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_016044|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC009403|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##BC110911|FAHD2A|51011|fumarylacetoacetate hydrolase domain containing 2A##NM_001164464|TRIM43B|653192|tripartite motif containing 43B	0.965896	
chr3	140271893	140272003	reg1042358.p1	3.398	+	AJ278018 BC103496 BC103506 BC104485 AY753303 TSC_hg19_v1_chr3_+_139654299	-617696	+	TSC_hg19_v1_chr3_+_139654026 AK315308 NM_022131 AK096432	-617930	+	TSC_hg19_v1_chr3_-_139396815 AK123208 BC034374 BC036218 NM_001200047 NM_178177	-875120	-	NM_152616 AK097416 AK310536 BC130472 BC130474 AF521868	125011	+	TSC_hg19_v1_chr3_+_140660687 NM_001104647 NM_018155 AK001480 AL136803 BC014064 BC019859 BC036272 AK296785 AB528573 EU831411 EU831504	388819	+	TSC_hg19_v1_chr3_+_140770412 BC051354	498530	+	AJ278018|CLSTN2|64084|calsyntenin 2##BC103496|CLSTN2|64084|calsyntenin 2##BC103506|CLSTN2|64084|calsyntenin 2##BC104485|CLSTN2|64084|calsyntenin 2##AY753303|CLSTN2|64084|calsyntenin 2##AK315308|CLSTN2|64084|calsyntenin 2##NM_022131|CLSTN2|64084|calsyntenin 2##AK096432|CLSTN2|64084|calsyntenin 2##AK123208|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC034374|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##BC036218|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_001200047|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_178177|NMNAT3|349565|nicotinamide nucleotide adenylyltransferase 3##NM_152616|TRIM42|287015|tripartite motif containing 42##AK097416|TRIM42|287015|tripartite motif containing 42##AK310536|TRIM42|287015|tripartite motif containing 42##BC130472|TRIM42|287015|tripartite motif containing 42##BC130474|TRIM42|287015|tripartite motif containing 42##AF521868|TRIM42|287015|tripartite motif containing 42##NM_001104647|SLC25A36|55186|solute carrier family 25, member 36##NM_018155|SLC25A36|55186|solute carrier family 25, member 36##AK001480|SLC25A36|55186|solute carrier family 25, member 36##AL136803|SLC25A36|55186|solute carrier family 25, member 36##BC014064|SLC25A36|55186|solute carrier family 25, member 36##BC019859|SLC25A36|55186|solute carrier family 25, member 36##BC036272|SLC25A36|55186|solute carrier family 25, member 36##AK296785|SLC25A36|55186|solute carrier family 25, member 36##EU831411|SLC25A36|55186|solute carrier family 25, member 36##EU831504|SLC25A36|55186|solute carrier family 25, member 36##BC051354|SPSB4|92369|splA/ryanodine receptor domain and SOCS box containing 4	0.46941	CTCF.p2:19:0.419
chr5	96869783	96869862	reg1002584.p1	3.398	+	TSC_hg19_v1_chr5_-_96518986 NM_001159749 NM_018343	-350835	-	TSC_hg19_v1_chr5_-_96518945 AK002021	-350880	-	TSC_hg19_v1_chr5_-_96518934 AK225348 BC000953	-350914	-	BC067736 NM_001012761 AK074887 TSC_hg19_v1_chr5_+_98105085	1235219	+	BC054860 BC117134 NM_001270 AF006513	1392406	-	TSC_hg19_v1_chr5_+_99871055 AY359108 AK289539 BC027332 NM_198507	3001251	+	NM_001159749|RIOK2|55781|RIO kinase 2 (yeast)##NM_018343|RIOK2|55781|RIO kinase 2 (yeast)##AK002021|RIOK2|55781|RIO kinase 2 (yeast)##AK225348|RIOK2|55781|RIO kinase 2 (yeast)##BC000953|RIOK2|55781|RIO kinase 2 (yeast)##BC067736|RGMB|285704|RGM domain family, member B##NM_001012761|RGMB|285704|RGM domain family, member B##AK074887|RGMB|285704|RGM domain family, member B##BC054860|CHD1|1105|chromodomain helicase DNA binding protein 1##BC117134|CHD1|1105|chromodomain helicase DNA binding protein 1##NM_001270|CHD1|1105|chromodomain helicase DNA binding protein 1##AF006513|CHD1|1105|chromodomain helicase DNA binding protein 1##AY359108|FAM174A|345757|family with sequence similarity 174, member A##AK289539|FAM174A|345757|family with sequence similarity 174, member A##BC027332|FAM174A|345757|family with sequence similarity 174, member A##NM_198507|FAM174A|345757|family with sequence similarity 174, member A	0.0	
chr6	46188510	46188691	reg1006743.p1	3.398	+	AK312790 TSC_hg19_v1_chr6_-_46138695 BC027615 AY358514 AK292842 AK295192 BX647968 NM_021572	-49934	-	TSC_hg19_v1_chr6_+_46097818 AK291276 AB020686	-90736	+	NM_014936 TSC_hg19_v1_chr6_+_46097726 BC018054	-90886	+	CU691584 DQ891658 DQ894845 AK312392 TSC_hg19_v1_chr6_-_46293389	104703	-	D83407 TSC_hg19_v1_chr6_-_46293410 BC038509	104807	-	NM_005822	105028	-	AK312790|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##BC027615|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##AY358514|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##AK292842|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##AK295192|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##BX647968|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##NM_021572|ENPP5|59084|ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative)##AK291276|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##AB020686|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##NM_014936|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##BC018054|ENPP4|22875|ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)##DQ891658|RCAN2|10231|regulator of calcineurin 2##DQ894845|RCAN2|10231|regulator of calcineurin 2##AK312392|RCAN2|10231|regulator of calcineurin 2##D83407|RCAN2|10231|regulator of calcineurin 2##BC038509|RCAN2|10231|regulator of calcineurin 2##NM_005822|RCAN2|10231|regulator of calcineurin 2	0.0	
chr7	102004055	102004137	reg1035867.p1	3.398	+	NM_001146210	-7208	-	TSC_hg19_v1_chr7_+_101928431 AB000520	-75653	+	TSC_hg19_v1_chr7_+_101928390 NM_020979	-75699	+	TSC_hg19_v1_chr7_+_102004329 NM_001242713 BC063572 AK098276	215	+	TSC_hg19_v1_chr7_+_102004338 BC048257 BC066362	256	+	TSC_hg19_v1_chr7_+_102023018 AK098134	18937	+	NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_020979|SH2B2|10603|SH2B adaptor protein 2##NM_001242713|LOC100289561|100289561|uncharacterized LOC100289561##BC063572|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough##AK098276|LOC100630923|100630923|LOC100289561-PRKRIP1 readthrough	0.0	
chr7	22648259	22648335	reg1037368.p2	3.398	+	BC066301 TSC_hg19_v1_chr7_-_22539806 AK308991 NM_001164460 NM_207342	-108450	-	AL833195 NM_012294	-251776	-	AB463479 AY161168 AY161169 CU691768 CU692942 BC009352 TSC_hg19_v1_chr7_-_21985500 AK095965 BC025242 BC032576 AK300781 BC039823 AK022955 AK292490 NM_001127370 NM_001127371 NM_018719	-662815	-	AK298077 AK301141 NM_000600 X04430 AK298013 M14584 M18403 BC015511 M54894 M29150 X04602 S56892 AB528399 BT019748 BT019749 CR450296 DQ891463 DQ894639	118526	+	TSC_hg19_v1_chr7_+_22767104 X04403	118821	+	CR456960 BC071973 NM_019059 TSC_hg19_v1_chr7_-_22862463 BC001732 AJ011007 AF086336 AF150733	214146	-	BC066301|STEAP1B|256227|STEAP family member 1B##AK308991|STEAP1B|256227|STEAP family member 1B##NM_001164460|STEAP1B|256227|STEAP family member 1B##NM_207342|STEAP1B|256227|STEAP family member 1B##AL833195|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##NM_012294|RAPGEF5|9771|Rap guanine nucleotide exchange factor (GEF) 5##AY161168|CDCA7L|55536|cell division cycle associated 7-like##AY161169|CDCA7L|55536|cell division cycle associated 7-like##BC009352|CDCA7L|55536|cell division cycle associated 7-like##AK095965|CDCA7L|55536|cell division cycle associated 7-like##BC025242|CDCA7L|55536|cell division cycle associated 7-like##BC032576|CDCA7L|55536|cell division cycle associated 7-like##AK300781|CDCA7L|55536|cell division cycle associated 7-like##BC039823|CDCA7L|55536|cell division cycle associated 7-like##AK022955|CDCA7L|55536|cell division cycle associated 7-like##AK292490|CDCA7L|55536|cell division cycle associated 7-like##NM_001127370|CDCA7L|55536|cell division cycle associated 7-like##NM_001127371|CDCA7L|55536|cell division cycle associated 7-like##NM_018719|CDCA7L|55536|cell division cycle associated 7-like##AK298077|IL6|3569|interleukin 6 (interferon, beta 2)##AK301141|IL6|3569|interleukin 6 (interferon, beta 2)##NM_000600|IL6|3569|interleukin 6 (interferon, beta 2)##X04430|IL6|3569|interleukin 6 (interferon, beta 2)##AK298013|IL6|3569|interleukin 6 (interferon, beta 2)##M14584|IL6|3569|interleukin 6 (interferon, beta 2)##M18403|IL6|3569|interleukin 6 (interferon, beta 2)##BC015511|IL6|3569|interleukin 6 (interferon, beta 2)##M54894|IL6|3569|interleukin 6 (interferon, beta 2)##M29150|IL6|3569|interleukin 6 (interferon, beta 2)##X04602|IL6|3569|interleukin 6 (interferon, beta 2)##S56892|IL6|3569|interleukin 6 (interferon, beta 2)##BT019748|IL6|3569|interleukin 6 (interferon, beta 2)##BT019749|IL6|3569|interleukin 6 (interferon, beta 2)##CR450296|IL6|3569|interleukin 6 (interferon, beta 2)##DQ891463|IL6|3569|interleukin 6 (interferon, beta 2)##DQ894639|IL6|3569|interleukin 6 (interferon, beta 2)##X04403|IL6|3569|interleukin 6 (interferon, beta 2)##CR456960|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC071973|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##NM_019059|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##BC001732|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AJ011007|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF086336|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)##AF150733|TOMM7|54543|translocase of outer mitochondrial membrane 7 homolog (yeast)	0.0	
chr8	146052916	146053097	reg1023107.p3	3.398	+	NM_003416 TSC_hg19_v1_chr8_+_146052963 AK096025 AK301561 AK308002 BX647998 BC058923 AK313745 AK300001 M29580	-49	+	AK127225 TSC_hg19_v1_chr8_-_146052601	-462	-	TSC_hg19_v1_chr8_+_146024301 AK131440 NM_213605 AK096527 AK097278	-28684	+	TSC_hg19_v1_chr8_-_146078415 BC003055 AK023070 BC065729	25380	-	TSC_hg19_v1_chr8_-_146078434 AK001477 BC002672	25422	-	TSC_hg19_v1_chr8_-_146078452 NM_001081004 NM_014066	25444	-	NM_003416|ZNF7|7553|zinc finger protein 7##AK096025|ZNF7|7553|zinc finger protein 7##AK301561|ZNF7|7553|zinc finger protein 7##AK308002|ZNF7|7553|zinc finger protein 7##BX647998|ZNF7|7553|zinc finger protein 7##BC058923|ZNF7|7553|zinc finger protein 7##AK313745|ZNF7|7553|zinc finger protein 7##AK300001|ZNF7|7553|zinc finger protein 7##M29580|ZNF7|7553|zinc finger protein 7##AK127225|LOC100130027|100130027|uncharacterized LOC100130027##AK131440|ZNF517|340385|zinc finger protein 517##NM_213605|ZNF517|340385|zinc finger protein 517##AK096527|ZNF517|340385|zinc finger protein 517##AK097278|ZNF517|340385|zinc finger protein 517##BC003055|COMMD5|28991|COMM domain containing 5##AK023070|COMMD5|28991|COMM domain containing 5##BC065729|COMMD5|28991|COMM domain containing 5##AK001477|COMMD5|28991|COMM domain containing 5##BC002672|COMMD5|28991|COMM domain containing 5##NM_001081004|COMMD5|28991|COMM domain containing 5##NM_014066|COMMD5|28991|COMM domain containing 5	0.0	
chr10	34680269	34680355	reg1041591.p2	3.397	+	TSC_hg19_v1_chr10_-_33623996 BX648025	-1056314	-	TSC_hg19_v1_chr10_-_33623799 BX648250 CR749333 NM_001024628 NM_001024629 NM_001244972 NM_001244973 NM_003873	-1056498	-	TSC_hg19_v1_chr10_-_33623471 AF016050 AF018956 AF145712 AF280547 AY249243 BT006995 CU675785 EU831654 EU831737 AF268691 BC007737 AB209641 AK292822 AL833608 BC007533	-1056859	-	AX765706 TSC_hg19_v1_chr10_-_35104251 AB073671 AF252293 AF332592 AF332593 AF467002 AF467003 AF467004 AF467005 AF467006 AX765704 BC071566 AF196185 AF196186 AF454058 NM_001184785 NM_001184786 NM_001184787 NM_001184788 NM_001184789 NM_001184790 NM_001184791 NM_001184792 NM_001184793 NM_001184794 NM_019619	423839	-	AK310225 AK300491 NM_001198778 NM_001198779	682900	-	TSC_hg19_v1_chr10_-_35379260 U83410 AK294080 BC009591 NM_003591	698960	-	BX648025|NRP1|8829|neuropilin 1##BX648250|NRP1|8829|neuropilin 1##CR749333|NRP1|8829|neuropilin 1##NM_001024628|NRP1|8829|neuropilin 1##NM_001024629|NRP1|8829|neuropilin 1##NM_001244972|NRP1|8829|neuropilin 1##NM_001244973|NRP1|8829|neuropilin 1##NM_003873|NRP1|8829|neuropilin 1##AF016050|NRP1|8829|neuropilin 1##AF018956|NRP1|8829|neuropilin 1##AF145712|NRP1|8829|neuropilin 1##AF280547|NRP1|8829|neuropilin 1##AY249243|NRP1|8829|neuropilin 1##BT006995|NRP1|8829|neuropilin 1##EU831654|NRP1|8829|neuropilin 1##EU831737|NRP1|8829|neuropilin 1##AF268691|NRP1|8829|neuropilin 1##BC007737|NRP1|8829|neuropilin 1##AB209641|NRP1|8829|neuropilin 1##AK292822|NRP1|8829|neuropilin 1##AL833608|NRP1|8829|neuropilin 1##BC007533|NRP1|8829|neuropilin 1##AB073671|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF252293|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332592|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF332593|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467002|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467003|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467004|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467005|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF467006|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##BC071566|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196185|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF196186|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AF454058|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184785|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184786|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184787|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184788|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184789|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184790|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184791|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184792|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184793|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_001184794|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##NM_019619|PARD3|56288|par-3 partitioning defective 3 homolog (C. elegans)##AK310225|CUL2|8453|cullin 2##AK300491|CUL2|8453|cullin 2##NM_001198778|CUL2|8453|cullin 2##NM_001198779|CUL2|8453|cullin 2##U83410|CUL2|8453|cullin 2##AK294080|CUL2|8453|cullin 2##BC009591|CUL2|8453|cullin 2##NM_003591|CUL2|8453|cullin 2	0.011092	
chr12	828712	828840	reg1036436.p2	3.397	+	CU691216 BC057766 AF205633 BC015737 AB528850 NM_016533 AK315995 AK296012	-56061	-	TSC_hg19_v1_chr12_-_752800 AK298043	-75957	-	BC033133 TSC_hg19_v1_chr12_+_752201 AK311371	-76598	+	AF061944 NM_001184985 NM_014823 NM_018979 NM_213655 BC021121 BC071959 BC094862	33380	+	AJ296290 BC141881 TSC_hg19_v1_chr12_+_862782	33980	+	BC013629 TSC_hg19_v1_chr12_+_1017145	188306	+	BC057766|NINJ2|4815|ninjurin 2##AF205633|NINJ2|4815|ninjurin 2##NM_016533|NINJ2|4815|ninjurin 2##AK315995|NINJ2|4815|ninjurin 2##AK296012|NINJ2|4815|ninjurin 2##BC033133|LOC100049716|100049716|uncharacterized LOC100049716##AF061944|WNK1|65125|WNK lysine deficient protein kinase 1##NM_001184985|WNK1|65125|WNK lysine deficient protein kinase 1##NM_014823|WNK1|65125|WNK lysine deficient protein kinase 1##NM_018979|WNK1|65125|WNK lysine deficient protein kinase 1##NM_213655|WNK1|65125|WNK lysine deficient protein kinase 1##BC021121|WNK1|65125|WNK lysine deficient protein kinase 1##BC071959|WNK1|65125|WNK lysine deficient protein kinase 1##BC094862|WNK1|65125|WNK lysine deficient protein kinase 1##AJ296290|WNK1|65125|WNK lysine deficient protein kinase 1##BC141881|WNK1|65125|WNK lysine deficient protein kinase 1##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1	0.0	
chr14	100366088	100366192	reg1036929.p2	3.397	+	TSC_hg19_v1_chr14_+_100259749 AK126980 BX247979 NM_001008707 NM_004434 BC033043 U97018 BC032541 CU689414 DQ891556 DQ894743	-106436	+	AK299812 TSC_hg19_v1_chr14_+_100240040	-126149	+	TSC_hg19_v1_chr14_+_100204058 AK307925	-162090	+	TSC_hg19_v1_chr14_+_100438137 AK289720 BC023997	72014	+	AK295919 TSC_hg19_v1_chr14_+_100485800	119619	+	TSC_hg19_v1_chr14_+_100531758 NM_016337 AK301379	165612	+	AK126980|EML1|2009|echinoderm microtubule associated protein like 1##BX247979|EML1|2009|echinoderm microtubule associated protein like 1##NM_001008707|EML1|2009|echinoderm microtubule associated protein like 1##NM_004434|EML1|2009|echinoderm microtubule associated protein like 1##BC033043|EML1|2009|echinoderm microtubule associated protein like 1##U97018|EML1|2009|echinoderm microtubule associated protein like 1##BC032541|EML1|2009|echinoderm microtubule associated protein like 1##DQ891556|EML1|2009|echinoderm microtubule associated protein like 1##DQ894743|EML1|2009|echinoderm microtubule associated protein like 1##AK299812|EML1|2009|echinoderm microtubule associated protein like 1##AK307925|EML1|2009|echinoderm microtubule associated protein like 1##AK289720|EVL|51466|Enah/Vasp-like##BC023997|EVL|51466|Enah/Vasp-like##AK295919|EVL|51466|Enah/Vasp-like##NM_016337|EVL|51466|Enah/Vasp-like##AK301379|EVL|51466|Enah/Vasp-like	0.925038	CTCF.p2:-14:0.925
chr16	68877912	68878015	reg1043588.p1	3.397	+	TSC_hg19_v1_chr16_+_68877504 BC092500 AB051533 NM_024562 AB463318	-458	+	TSC_hg19_v1_chr16_+_68771304 Z18923	-106652	+	TSC_hg19_v1_chr16_+_68771242 BC015576 AB025105 AB025106	-106718	+	AK291400 NM_001199280	261503	+	TSC_hg19_v1_chr16_+_69140124 NM_138612 BC021853	262177	+	AF234839 NM_005329	263479	+	BC092500|TMCO7|79613|transmembrane and coiled-coil domains 7##AB051533|TMCO7|79613|transmembrane and coiled-coil domains 7##NM_024562|TMCO7|79613|transmembrane and coiled-coil domains 7##Z18923|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025105|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AB025106|CDH1|999|cadherin 1, type 1, E-cadherin (epithelial)##AK291400|HAS3|3038|hyaluronan synthase 3##NM_001199280|HAS3|3038|hyaluronan synthase 3##NM_138612|HAS3|3038|hyaluronan synthase 3##BC021853|HAS3|3038|hyaluronan synthase 3##AF234839|HAS3|3038|hyaluronan synthase 3##NM_005329|HAS3|3038|hyaluronan synthase 3	0.048224	
chr16	70438170	70438350	reg1027742.p1	3.397	+	TSC_hg19_v1_chr16_+_70380805 AK001988 CR749227 BC025771 AK125701 AK310804 AK223262 AK310604 AL832970 BC005162 BC006544 NM_018332 BC137496 BC137497 AK299539 CU675025	-57432	+	AK027378 AL136639 TSC_hg19_v1_chr16_+_70333096 BC003626 BC010008 AF136175 AF183422 EU831645 EU831729 AB527308 CU678542 AJ237946 CR457215 CR533509	-105112	+	TSC_hg19_v1_chr16_+_70333090 AK296868 NM_001014449 NM_001014451 NM_007242 AK316346 AK223115	-105184	+	TSC_hg19_v1_chr16_-_70473007 NM_006927	34721	-	AJ441184 AK056456 AK092025 AK128387 AK293794 AK315590 AX747320 NM_145059 AK074168 BC032542	50239	+	AK096727 TSC_hg19_v1_chr16_+_70502845 BC015955	64580	+	AK001988|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##CR749227|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC025771|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK125701|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310804|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK223262|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK310604|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AL832970|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC005162|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC006544|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##NM_018332|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137496|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##BC137497|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK299539|DDX19A|55308|DEAD (Asp-Glu-Ala-As) box polypeptide 19A##AK027378|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AL136639|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC003626|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##BC010008|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831645|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##EU831729|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AJ237946|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR457215|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##CR533509|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK296868|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014449|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_001014451|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_007242|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK316346|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##AK223115|DDX19B|11269|DEAD (Asp-Glu-Ala-As) box polypeptide 19B##NM_006927|ST3GAL2|6483|ST3 beta-galactoside alpha-2,3-sialyltransferase 2##AJ441184|FUK|197258|fucokinase##AK056456|FUK|197258|fucokinase##AK092025|FUK|197258|fucokinase##AK128387|FUK|197258|fucokinase##AK293794|FUK|197258|fucokinase##AK315590|FUK|197258|fucokinase##NM_145059|FUK|197258|fucokinase##AK074168|FUK|197258|fucokinase##BC032542|FUK|197258|fucokinase##AK096727|FUK|197258|fucokinase	0.232824	CTCF.p2:17:0.233
chr17	43306534	43306654	reg1039126.p2	3.397	+	TSC_hg19_v1_chr17_+_43299284 AY278319 NM_005892 BC111564	-7234	+	AK056946 NM_144608	-68331	+	TSC_hg19_v1_chr17_+_43225936 BC006460	-80659	+	AK096807 TSC_hg19_v1_chr17_-_43319268	12602	-	TSC_hg19_v1_chr17_+_43325300 AK311429	18710	+	BC028124 AF433663 AK302184 AK058143 NM_152343	32861	-	AY278319|FMNL1|752|formin-like 1##NM_005892|FMNL1|752|formin-like 1##BC111564|FMNL1|752|formin-like 1##AK056946|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##NM_144608|HEXIM2|124790|hexamethylene bis-acetamide inducible 2##BC006460|HEXIM1|10614|hexamethylene bis-acetamide inducible 1##AK311429|LOC100133991|100133991|uncharacterized LOC100133991##BC028124|C17orf46|124783|chromosome 17 open reading frame 46##AF433663|C17orf46|124783|chromosome 17 open reading frame 46##AK302184|C17orf46|124783|chromosome 17 open reading frame 46##AK058143|C17orf46|124783|chromosome 17 open reading frame 46##NM_152343|C17orf46|124783|chromosome 17 open reading frame 46	0.0	
chr17	7298287	7298360	reg1034959.p1	3.397	+	BC014989 NM_001201576 NM_020360	-163	-	AK124006 AF289602 BC028080 TSC_hg19_v1_chr17_-_7297842 AK098229 AK075188 AK314643 BC093026 AF159442	-466	-	NM_001251902 NM_003985 AK311063 AK225403 AK310684 U43408	-13973	+	AK290117 TSC_hg19_v1_chr17_-_7307417 AK055822 BC030270 NM_152766	9111	-	AF376802 NM_020795	13178	+	AK097400 BC033882 NM_199339 CU689788	25349	+	NM_001201576|PLSCR3|57048|phospholipid scramblase 3##NM_020360|PLSCR3|57048|phospholipid scramblase 3##AK124006|PLSCR3|57048|phospholipid scramblase 3##AF289602|PLSCR3|57048|phospholipid scramblase 3##BC028080|PLSCR3|57048|phospholipid scramblase 3##AK098229|PLSCR3|57048|phospholipid scramblase 3##AK075188|PLSCR3|57048|phospholipid scramblase 3##AK314643|PLSCR3|57048|phospholipid scramblase 3##BC093026|PLSCR3|57048|phospholipid scramblase 3##AF159442|PLSCR3|57048|phospholipid scramblase 3##NM_001251902|TNK1|8711|tyrosine kinase, non-receptor, 1##NM_003985|TNK1|8711|tyrosine kinase, non-receptor, 1##AK311063|TNK1|8711|tyrosine kinase, non-receptor, 1##AK225403|TNK1|8711|tyrosine kinase, non-receptor, 1##AK310684|TNK1|8711|tyrosine kinase, non-receptor, 1##U43408|TNK1|8711|tyrosine kinase, non-receptor, 1##AK290117|C17orf61-PLSCR3|100529211|C17orf61-PLSCR3 readthrough##AK055822|C17orf61-PLSCR3|100529211|C17orf61-PLSCR3 readthrough##BC030270|C17orf61|254863|chromosome 17 open reading frame 61##NM_152766|C17orf61|254863|chromosome 17 open reading frame 61##AF376802|NLGN2|57555|neuroligin 2##NM_020795|NLGN2|57555|neuroligin 2##AK097400|SPEM1|374768|spermatid maturation 1##BC033882|SPEM1|374768|spermatid maturation 1##NM_199339|SPEM1|374768|spermatid maturation 1	0.0	
chr18	43652166	43652300	reg1038117.p1	3.397	+	DQ893199 DQ893200 DQ893201 DQ893695 DQ896527 DQ896528 DQ896529 TSC_hg19_v1_chr18_-_43652247 BC035395 BC008216 NM_024430	-25	-	AB046852 TSC_hg19_v1_chr18_-_43547294 NM_020964	-104955	-	AK172835 NM_213602 AY971516 AK290402 AK290400 AK095432	-246609	+	TSC_hg19_v1_chr18_-_43668143 AK129804	15944	-	TSC_hg19_v1_chr18_-_43669608 BC003119	17366	-	TSC_hg19_v1_chr18_-_43678228 AB463421 BT007209 CU676424 DQ890557 DQ894210 X65460	25979	-	DQ893199|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893200|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893201|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ893695|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896527|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896528|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##DQ896529|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##BC035395|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##NM_024430|PSTPIP2|9050|proline-serine-threonine phosphatase interacting protein 2##AB046852|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##NM_020964|EPG5|57724|ectopic P-granules autophagy protein 5 homolog (C. elegans)##AK172835|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##NM_213602|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AY971516|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290402|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK290400|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK095432|SIGLEC15|284266|sialic acid binding Ig-like lectin 15##AK129804|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##BC003119|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##BT007209|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##DQ890557|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##DQ894210|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle##X65460|ATP5A1|498|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle	0.0	
chr19	4575836	4575929	reg1005046.p1	3.397	+	BC142617 TSC_hg19_v1_chr19_-_4559731 AK300037 NM_032108	-16141	-	AK127689 BC070198 TSC_hg19_v1_chr19_-_4540114	-35782	-	AF403428 NM_052972 BC034389 AB073607 AK027382 AK303861 AK314506 TSC_hg19_v1_chr19_-_4540049	-35838	-	NM_152362 TSC_hg19_v1_chr19_+_4639539 BC017672 AK097251	63656	+	NM_001167942	64146	+	BC003639 AL365373 AL365374 AF282264 AB590867 BC014655 AK098829 TSC_hg19_v1_chr19_-_4670355	94461	-	BC142617|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##AK300037|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##NM_032108|SEMA6B|10501|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B##BC070198|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AF403428|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_052972|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##BC034389|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AB073607|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK027382|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK303861|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##AK314506|LRG1|116844|leucine-rich alpha-2-glycoprotein 1##NM_152362|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC017672|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##AK097251|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##NM_001167942|TNFAIP8L1|126282|tumor necrosis factor, alpha-induced protein 8-like 1##BC003639|C19orf10|56005|chromosome 19 open reading frame 10##AL365373|C19orf10|56005|chromosome 19 open reading frame 10##AL365374|C19orf10|56005|chromosome 19 open reading frame 10##AF282264|C19orf10|56005|chromosome 19 open reading frame 10##BC014655|C19orf10|56005|chromosome 19 open reading frame 10##AK098829|C19orf10|56005|chromosome 19 open reading frame 10	0.0	
chr19	52068152	52068247	reg1038846.p1	3.397	+	U71382 BC140798 BC035359 AK300182 AK300170 AK308174 AK309903 D86358 D86359 NM_001177547 NM_001177548 NM_001177549 NM_001245 NM_198845 NM_198846	-33199	-	CU690206 AY358140 AF282256 AK225931 BC035809 AK095919 NM_053003 TSC_hg19_v1_chr19_-_52005055	-63170	-	NM_033329	-64553	-	NM_007147 BC007778 AK292687 BC052997 D50419	6348	+	DQ892433 AF170484 BC029896 AK225753 U71383 NM_003830	65458	-	AY358369 AY854038 AK298284 NM_001098612	81870	-	U71382|SIGLEC6|946|sialic acid binding Ig-like lectin 6##BC140798|SIGLEC6|946|sialic acid binding Ig-like lectin 6##BC035359|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK300182|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK300170|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK308174|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AK309903|SIGLEC6|946|sialic acid binding Ig-like lectin 6##D86358|SIGLEC6|946|sialic acid binding Ig-like lectin 6##D86359|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177547|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177548|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001177549|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_001245|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_198845|SIGLEC6|946|sialic acid binding Ig-like lectin 6##NM_198846|SIGLEC6|946|sialic acid binding Ig-like lectin 6##AY358140|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AF282256|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AK225931|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##BC035809|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##AK095919|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##NM_053003|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##NM_033329|SIGLEC12|89858|sialic acid binding Ig-like lectin 12 (gene/pseudogene)##NM_007147|ZNF175|7728|zinc finger protein 175##BC007778|ZNF175|7728|zinc finger protein 175##AK292687|ZNF175|7728|zinc finger protein 175##BC052997|ZNF175|7728|zinc finger protein 175##D50419|ZNF175|7728|zinc finger protein 175##DQ892433|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AF170484|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##BC029896|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AK225753|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##U71383|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_003830|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AY854038|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##AK298284|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##NM_001098612|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14	0.886329	CTCF.p2:2:0.886
chr21	34785560	34785660	reg1036514.p2	3.397	+	TSC_hg19_v1_chr21_+_34775780 AB463788 DQ892320 DQ895522	-9797	+	AK314005 TSC_hg19_v1_chr21_+_34775746 AK292246	-9862	+	TSC_hg19_v1_chr21_+_34775735 BC003624 U05877	-9878	+	TSC_hg19_v1_chr21_-_34787167 DQ655977	1598	-	TSC_hg19_v1_chr21_-_34852209 AK310701	66577	-	TSC_hg19_v1_chr21_-_34852239 AY358634 BC000569 AK309977 BX537378 AF045606	66639	-	DQ892320|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##DQ895522|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK314005|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK292246|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##BC003624|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##U05877|IFNGR2|3460|interferon gamma receptor 2 (interferon gamma transducer 1)##AK310701|TMEM50B|757|transmembrane protein 50B##AY358634|TMEM50B|757|transmembrane protein 50B##BC000569|TMEM50B|757|transmembrane protein 50B##AK309977|TMEM50B|757|transmembrane protein 50B##AF045606|TMEM50B|757|transmembrane protein 50B	0.0	
chr21	35419220	35419325	reg1042911.p1	3.397	+	DQ656021 DQ656022 BT019836 CR456822 BC021233 AK124187 TSC_hg19_v1_chr21_-_35288097 AK222962 AK311796 BC022865 X83218 AK222608 NM_001697	-131180	-	TSC_hg19_v1_chr21_+_35190587 AY340592 AY340593 AF180522 AY138139	-228602	+	TSC_hg19_v1_chr21_+_35014896 AK027846 BC058925 AF114487 AF114488 NM_001001132 NM_003024 AK075290 BC046162 BC039036 BC117560 AK300274 BC073744 AK074554 BC020269 BC013578 AF064243 AF064244 DQ679754 DQ679755 DQ679756 DQ679757 EU107386 EU120735 EU120736 EU140799 EU191901 BC116185 BC116186	-404417	+	TSC_hg19_v1_chr21_+_35445875 AY061855 NM_032476 AX750578 NM_006933	26569	+	AB049942 AK312084 TSC_hg19_v1_chr21_+_35445877 BC004976 BC010076 BC000547 BC051302	26657	+	AF302095 DQ192290 NM_172201 BC112087 BC093892	317074	+	BT019836|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##CR456822|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC021233|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK124187|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222962|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK311796|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##BC022865|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##X83218|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AK222608|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##NM_001697|ATP5O|539|ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit##AY340592|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY340593|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF180522|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY138139|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK027846|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC058925|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114487|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF114488|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_001001132|ITSN1|6453|intersectin 1 (SH3 domain protein)##NM_003024|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK075290|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC039036|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC117560|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK300274|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC073744|ITSN1|6453|intersectin 1 (SH3 domain protein)##AK074554|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC020269|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC013578|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064243|ITSN1|6453|intersectin 1 (SH3 domain protein)##AF064244|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679754|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679755|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679756|ITSN1|6453|intersectin 1 (SH3 domain protein)##DQ679757|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU107386|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120735|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU120736|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU140799|ITSN1|6453|intersectin 1 (SH3 domain protein)##EU191901|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116185|ITSN1|6453|intersectin 1 (SH3 domain protein)##BC116186|ITSN1|6453|intersectin 1 (SH3 domain protein)##AY061855|MRPS6|64968|mitochondrial ribosomal protein S6##NM_032476|MRPS6|64968|mitochondrial ribosomal protein S6##AX750578|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##NM_006933|SLC5A3|6526|solute carrier family 5 (sodium/myo-inositol cotransporter), member 3##AB049942|MRPS6|64968|mitochondrial ribosomal protein S6##AK312084|MRPS6|64968|mitochondrial ribosomal protein S6##BC004976|MRPS6|64968|mitochondrial ribosomal protein S6##BC010076|MRPS6|64968|mitochondrial ribosomal protein S6##BC000547|MRPS6|64968|mitochondrial ribosomal protein S6##BC051302|MRPS6|64968|mitochondrial ribosomal protein S6##AF302095|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##DQ192290|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##NM_172201|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC112087|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2##BC093892|KCNE2|9992|potassium voltage-gated channel, Isk-related family, member 2	0.0	
chr8	52439780	52439847	reg1043808.p1	3.397	+	AJ003030 NM_018967	-1615217	+	NM_001007176 BC017981 AJ276240	-2454904	+	AB464227 CU677105 EU446862 TSC_hg19_v1_chr8_-_49833989 BC015895 BC014890 AK223368 AK312661 NM_003068	-2605903	-	EU170240 AY877349 NM_144651	282140	-	AK304332 BC010693 TSC_hg19_v1_chr8_-_52811575 BC014954 AK056952	371789	-	TSC_hg19_v1_chr8_-_52811724 NM_052937	371914	-	AJ003030|SNTG1|54212|syntrophin, gamma 1##NM_018967|SNTG1|54212|syntrophin, gamma 1##NM_001007176|C8orf22|492307|chromosome 8 open reading frame 22##BC017981|C8orf22|492307|chromosome 8 open reading frame 22##AJ276240|C8orf22|492307|chromosome 8 open reading frame 22##EU446862|SNAI2|6591|snail homolog 2 (Drosophila)##BC015895|SNAI2|6591|snail homolog 2 (Drosophila)##BC014890|SNAI2|6591|snail homolog 2 (Drosophila)##AK223368|SNAI2|6591|snail homolog 2 (Drosophila)##AK312661|SNAI2|6591|snail homolog 2 (Drosophila)##NM_003068|SNAI2|6591|snail homolog 2 (Drosophila)##EU170240|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AY877349|PXDNL|137902|peroxidasin homolog (Drosophila)-like##NM_144651|PXDNL|137902|peroxidasin homolog (Drosophila)-like##AK304332|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##BC010693|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##AK056952|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1##NM_052937|PCMTD1|115294|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	0.0	
chr11	65082050	65082176	reg1031854.p1	3.396	+	TSC_hg19_v1_chr11_+_65029432 AK309284 BC001347 BC002990 BC018813 BC018814 NM_002689 AK297842 AK307831 AK025315	-52707	+	AK131327 NM_001004326 BC146850	-100799	+	TSC_hg19_v1_chr11_+_64949413 BC017200	-132674	+	NM_006779 TSC_hg19_v1_chr11_+_65082336 AF001436 AF163840 AK315444 BC075834	224	+	NM_006268 TSC_hg19_v1_chr11_+_65101322 AK313408 AK300061 BX641135	19171	+	TSC_hg19_v1_chr11_+_65101347 BC014889 AK291944 U94585 AB463002 BT006718 DQ892397 DQ895612	19238	+	AK309284|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC001347|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC002990|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018813|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##BC018814|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##NM_002689|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK297842|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK307831|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK025315|POLA2|23649|polymerase (DNA directed), alpha 2 (70kD subunit)##AK131327|SLC22A20|440044|solute carrier family 22, member 20##NM_001004326|SLC22A20|440044|solute carrier family 22, member 20##BC146850|SLC22A20|440044|solute carrier family 22, member 20##BC017200|CAPN1|823|calpain 1, (mu/I) large subunit##NM_006779|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF001436|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AF163840|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##AK315444|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##BC075834|CDC42EP2|10435|CDC42 effector protein (Rho GTPase binding) 2##NM_006268|DPF2|5977|D4, zinc and double PHD fingers family 2##AK313408|DPF2|5977|D4, zinc and double PHD fingers family 2##AK300061|DPF2|5977|D4, zinc and double PHD fingers family 2##BX641135|DPF2|5977|D4, zinc and double PHD fingers family 2##BC014889|DPF2|5977|D4, zinc and double PHD fingers family 2##AK291944|DPF2|5977|D4, zinc and double PHD fingers family 2##U94585|DPF2|5977|D4, zinc and double PHD fingers family 2##BT006718|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ892397|DPF2|5977|D4, zinc and double PHD fingers family 2##DQ895612|DPF2|5977|D4, zinc and double PHD fingers family 2	0.0	
chr1	247553701	247553796	reg1008609.p2	3.396	+	TSC_hg19_v1_chr1_-_247494994 BC007263 NM_032752	-58731	-	BC126341 BC126367 NM_173858	-134425	+	BC032514 BC096349 BC096350 BC096351 BC099661 BC013605 AK054647 NM_001243740 NM_003431	-218464	-	AK314998 NM_001079821 NM_001127461 TSC_hg19_v1_chr1_+_247579474 AB208891	25721	+	AF410477 AF427617 NM_001127462 NM_001243133 NM_004895 NM_183395	27602	+	NM_001004492 BC137181 BC137205	61547	-	BC007263|ZNF496|84838|zinc finger protein 496##NM_032752|ZNF496|84838|zinc finger protein 496##BC126341|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC126367|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##NM_173858|VN1R5|317705|vomeronasal 1 receptor 5 (gene/pseudogene)##BC032514|ZNF124|7678|zinc finger protein 124##BC096349|ZNF124|7678|zinc finger protein 124##BC096350|ZNF124|7678|zinc finger protein 124##BC096351|ZNF124|7678|zinc finger protein 124##BC099661|ZNF124|7678|zinc finger protein 124##BC013605|ZNF124|7678|zinc finger protein 124##AK054647|ZNF124|7678|zinc finger protein 124##NM_001243740|ZNF124|7678|zinc finger protein 124##NM_003431|ZNF124|7678|zinc finger protein 124##AK314998|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001079821|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127461|NLRP3|114548|NLR family, pyrin domain containing 3##AB208891|NLRP3|114548|NLR family, pyrin domain containing 3##AF410477|NLRP3|114548|NLR family, pyrin domain containing 3##AF427617|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001127462|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001243133|NLRP3|114548|NLR family, pyrin domain containing 3##NM_004895|NLRP3|114548|NLR family, pyrin domain containing 3##NM_183395|NLRP3|114548|NLR family, pyrin domain containing 3##NM_001004492|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##BC137181|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11##BC137205|OR2B11|127623|olfactory receptor, family 2, subfamily B, member 11	0.0	
chr12	7074169	7074333	reg1003880.p1	3.396	+	TSC_hg19_v1_chr12_+_7060554 AK309037 M74903 AF178946	-13649	+	TSC_hg19_v1_chr12_+_7060550 AK290421	-13703	+	AK223629 TSC_hg19_v1_chr12_+_7060538	-13713	+	TSC_hg19_v1_chr12_-_7079814 AB528395 DQ891808 EU176626 BC014766 BC013228 AF178980 AF150962	5470	-	TSC_hg19_v1_chr12_-_7079828 AK298217 AK301316 AF126021 NM_007273 BC110322 NM_001144831	5624	-	NM_006331 BC055314 TSC_hg19_v1_chr12_+_7080072 AK298207	5758	+	M74903|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AF178946|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK290421|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##AK223629|PTPN6|5777|protein tyrosine phosphatase, non-receptor type 6##DQ891808|PHB2|11331|prohibitin 2##EU176626|PHB2|11331|prohibitin 2##BC014766|PHB2|11331|prohibitin 2##BC013228|PHB2|11331|prohibitin 2##AF178980|PHB2|11331|prohibitin 2##AF150962|PHB2|11331|prohibitin 2##AK298217|PHB2|11331|prohibitin 2##AK301316|PHB2|11331|prohibitin 2##AF126021|PHB2|11331|prohibitin 2##NM_007273|PHB2|11331|prohibitin 2##BC110322|PHB2|11331|prohibitin 2##NM_001144831|PHB2|11331|prohibitin 2##NM_006331|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##BC055314|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)##AK298207|EMG1|10436|EMG1 nucleolar protein homolog (S. cerevisiae)	0.0	
chr14	59712539	59712607	reg1042626.p1	3.396	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	-57169	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-607827	+	AK302579 NM_001244193 AK310356 AK302718	-806147	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	219349	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	219483	-	TSC_hg19_v1_chr14_-_59951106 AK058165 NM_144581 BC012131	238507	-	BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135##AK058165|C14orf149|112849|chromosome 14 open reading frame 149##NM_144581|C14orf149|112849|chromosome 14 open reading frame 149##BC012131|C14orf149|112849|chromosome 14 open reading frame 149	0.0	
chr15	50455620	50455753	reg1037619.p1	3.396	+	TSC_hg19_v1_chr15_-_50411492 BC144298 BC144297 NM_024837	-44220	-	AB075819 TSC_hg19_v1_chr15_-_50405521	-50170	-	TSC_hg19_v1_chr15_+_49913254 NM_001144955 NM_020234 BC018028 AF168717 AK290184 BC093073 BC032535	-542437	+	TSC_hg19_v1_chr15_+_50474425 AK290262 NM_001159629 NM_003645 AF096290 AK222859 D88308 AK223145 BC057770 CU691220	18804	+	AK308833 NM_002112	102475	-	TSC_hg19_v1_chr15_-_50647062 BC068063 BC009935 AK000900	191383	-	BC144298|ATP8B4|79895|ATPase, class I, type 8B, member 4##BC144297|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_024837|ATP8B4|79895|ATPase, class I, type 8B, member 4##AB075819|ATP8B4|79895|ATPase, class I, type 8B, member 4##NM_001144955|DTWD1|56986|DTW domain containing 1##NM_020234|DTWD1|56986|DTW domain containing 1##BC018028|DTWD1|56986|DTW domain containing 1##AF168717|DTWD1|56986|DTW domain containing 1##AK290184|DTWD1|56986|DTW domain containing 1##BC093073|DTWD1|56986|DTW domain containing 1##BC032535|DTWD1|56986|DTW domain containing 1##AK290262|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_001159629|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##NM_003645|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AF096290|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK222859|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##D88308|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK223145|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##BC057770|SLC27A2|11001|solute carrier family 27 (fatty acid transporter), member 2##AK308833|HDC|3067|histidine decarboxylase##NM_002112|HDC|3067|histidine decarboxylase##BC068063|FLJ10038|55056|uncharacterized protein FLJ10038##BC009935|FLJ10038|55056|uncharacterized protein FLJ10038##AK000900|FLJ10038|55056|uncharacterized protein FLJ10038	0.0	
chr16	3173838	3173940	reg1023699.p1	3.396	+	TSC_hg19_v1_chr16_+_3162586 NM_001042428 NM_003456 AK313009 AF060865 BC002810	-11294	+	TSC_hg19_v1_chr16_-_3149286 AK074736	-24607	-	BC114452 AK027455 NM_032805	-31040	-	TSC_hg19_v1_chr16_-_3184862 AF098968	10982	-	AF017433 TSC_hg19_v1_chr16_+_3184980	11063	+	TSC_hg19_v1_chr16_+_3185058 NM_004220	11163	+	NM_001042428|ZNF205|7755|zinc finger protein 205##NM_003456|ZNF205|7755|zinc finger protein 205##AK313009|ZNF205|7755|zinc finger protein 205##AF060865|ZNF205|7755|zinc finger protein 205##BC002810|ZNF205|7755|zinc finger protein 205##AK074736|ZSCAN10|84891|zinc finger and SCAN domain containing 10##BC114452|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AK027455|ZSCAN10|84891|zinc finger and SCAN domain containing 10##NM_032805|ZSCAN10|84891|zinc finger and SCAN domain containing 10##AF017433|ZNF213|7760|zinc finger protein 213##NM_004220|ZNF213|7760|zinc finger protein 213	0.0	
chr16	70606912	70607033	reg1037062.p1	3.396	+	TSC_hg19_v1_chr16_+_70557732 D87686 BC068974	-49224	+	BC009780 TSC_hg19_v1_chr16_+_70557724	-49248	+	TSC_hg19_v1_chr16_+_70557713 NM_012426 AK291768	-49272	+	NM_001172771 NM_152456	6825	+	NM_001172772	50922	+	BC002770 TSC_hg19_v1_chr16_-_70713956	106971	-	D87686|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##BC068974|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##BC009780|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##NM_012426|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##AK291768|SF3B3|23450|splicing factor 3b, subunit 3, 130kDa##NM_001172771|IL34|146433|interleukin 34##NM_152456|IL34|146433|interleukin 34##NM_001172772|IL34|146433|interleukin 34##BC002770|MTSS1L|92154|metastasis suppressor 1-like	0.0	
chr16	81757071	81757206	reg1001901.p2	3.396	+	AY172689 NM_030629	-228185	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-278305	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-408488	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	55759	+	TSC_hg19_v1_chr16_+_81812901 AB208914	55764	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	55792	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr16	85431268	85431348	reg1032732.p2	3.396	+	BC093665 BC111944 AK126284 NM_198491	-285254	-	TSC_hg19_v1_chr16_+_85061400 AK299892 BC030280 NM_014732	-369938	+	TSC_hg19_v1_chr16_-_85045119 BC018772 AK000286 NM_001145548 NM_017740	-386179	-	TSC_hg19_v1_chr16_+_85645014 BC037556 NM_001134473	213713	+	NM_014615 TSC_hg19_v1_chr16_+_85646927 D80004	215645	+	CR457186 CU678432 CU679645 AK091519 AK001275 BC022839 AK223123 BC062444 TSC_hg19_v1_chr16_-_85722561 BC010164 AF125098 AF151880 AF201939	291234	-	BC093665|FAM92B|339145|family with sequence similarity 92, member B##BC111944|FAM92B|339145|family with sequence similarity 92, member B##AK126284|FAM92B|339145|family with sequence similarity 92, member B##NM_198491|FAM92B|339145|family with sequence similarity 92, member B##AK299892|KIAA0513|9764|KIAA0513##BC030280|KIAA0513|9764|KIAA0513##NM_014732|KIAA0513|9764|KIAA0513##BC018772|ZDHHC7|55625|zinc finger, DHHC-type containing 7##AK000286|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_001145548|ZDHHC7|55625|zinc finger, DHHC-type containing 7##NM_017740|ZDHHC7|55625|zinc finger, DHHC-type containing 7##BC037556|KIAA0182|23199|KIAA0182##NM_001134473|KIAA0182|23199|KIAA0182##NM_014615|KIAA0182|23199|KIAA0182##D80004|KIAA0182|23199|KIAA0182##CR457186|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK091519|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK001275|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC022839|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AK223123|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC062444|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##BC010164|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF125098|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF151880|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)##AF201939|GINS2|51659|GINS complex subunit 2 (Psf2 homolog)	0.725575	CTCF.p2:-16:0.726
chr19	14682674	14682855	reg1019025.p1	3.396	+	TSC_hg19_v1_chr19_+_14640435 AK001416 AK315412 BC007801 BC013881 BC005952 AF038958 BC002425 BC034484 AF222742 AX771269 AF038959 AB529027 DQ891949 DQ895135 EU832830 GQ129437	-42305	+	AK094087 TSC_hg19_v1_chr19_+_14640406	-42358	+	BC005384 TSC_hg19_v1_chr19_+_14640405 AK299134	-42360	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	85	-	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	11150	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	102913	-	AK001416|TECR|9524|trans-2,3-enoyl-CoA reductase##AK315412|TECR|9524|trans-2,3-enoyl-CoA reductase##BC007801|TECR|9524|trans-2,3-enoyl-CoA reductase##BC013881|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005952|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038958|TECR|9524|trans-2,3-enoyl-CoA reductase##BC002425|TECR|9524|trans-2,3-enoyl-CoA reductase##BC034484|TECR|9524|trans-2,3-enoyl-CoA reductase##AF222742|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038959|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ891949|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ895135|TECR|9524|trans-2,3-enoyl-CoA reductase##EU832830|TECR|9524|trans-2,3-enoyl-CoA reductase##GQ129437|TECR|9524|trans-2,3-enoyl-CoA reductase##AK094087|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005384|TECR|9524|trans-2,3-enoyl-CoA reductase##AK299134|TECR|9524|trans-2,3-enoyl-CoA reductase##CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3	0.018023	
chr19	16705206	16705355	reg1032466.p2	3.396	+	TSC_hg19_v1_chr19_+_16683381 AK094229	-21883	+	TSC_hg19_v1_chr19_-_16683205 BC062562 NM_024881	-22084	-	TSC_hg19_v1_chr19_-_16653256 NM_006387	-52017	-	AK313778 BC110430 TSC_hg19_v1_chr19_-_16739013 BC068564 NM_004831	33720	-	TSC_hg19_v1_chr19_-_16770944 AK025602 BC069279 BX648276	65649	-	TSC_hg19_v1_chr19_-_16770956 NM_024104	65682	-	BC062562|SLC35E1|79939|solute carrier family 35, member E1##NM_024881|SLC35E1|79939|solute carrier family 35, member E1##NM_006387|CHERP|10523|calcium homeostasis endoplasmic reticulum protein##AK313778|MED26|9441|mediator complex subunit 26##BC110430|MED26|9441|mediator complex subunit 26##NM_004831|MED26|9441|mediator complex subunit 26##AK025602|C19orf42|79086|chromosome 19 open reading frame 42##BC069279|C19orf42|79086|chromosome 19 open reading frame 42##BX648276|C19orf42|79086|chromosome 19 open reading frame 42##NM_024104|C19orf42|79086|chromosome 19 open reading frame 42	0.0	
chr4	185458230	185458331	reg1006411.p2	3.396	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	-62599	-	BC035035 AY358676 AK057370 NM_153343	-319215	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-630369	+	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	112321	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	112553	+	TSC_hg19_v1_chr4_+_185570923 BC064600 AK307317	112649	+	X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111##BC064600|CCDC111|201973|coiled-coil domain containing 111##AK307317|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr6	13486273	13486373	reg1028805.p2	3.396	+	AK027010 NM_001242630	-77955	-	AF151073 AK223445 AY542308 AY826820 TSC_hg19_v1_chr6_-_13328771 BC050465 AK057228 AK296391 BC007054 AL833474 NM_001143964 NM_001143965 NM_001143966 NM_016495	-157623	-	AK091836 AX747210 NM_001242698	-190506	-	AK055131 AF264036 NM_001242628	75	-	TSC_hg19_v1_chr6_-_13487051 BC148295 BC119005 BC124557	774	-	TSC_hg19_v1_chr6_-_13487810 AK000337 NM_001242629 NM_018988	1535	-	AK027010|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242630|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF151073|TBC1D7|51256|TBC1 domain family, member 7##AK223445|TBC1D7|51256|TBC1 domain family, member 7##AY542308|TBC1D7|51256|TBC1 domain family, member 7##AY826820|TBC1D7|51256|TBC1 domain family, member 7##BC050465|TBC1D7|51256|TBC1 domain family, member 7##AK057228|TBC1D7|51256|TBC1 domain family, member 7##AK296391|TBC1D7|51256|TBC1 domain family, member 7##BC007054|TBC1D7|51256|TBC1 domain family, member 7##AL833474|TBC1D7|51256|TBC1 domain family, member 7##NM_001143964|TBC1D7|51256|TBC1 domain family, member 7##NM_001143965|TBC1D7|51256|TBC1 domain family, member 7##NM_001143966|TBC1D7|51256|TBC1 domain family, member 7##NM_016495|TBC1D7|51256|TBC1 domain family, member 7##AK091836|LOC100130357|100130357|uncharacterized LOC100130357##NM_001242698|LOC100130357|100130357|uncharacterized LOC100130357##AK055131|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AF264036|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242628|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC148295|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC119005|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##BC124557|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##AK000337|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_001242629|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1##NM_018988|GFOD1|54438|glucose-fructose oxidoreductase domain containing 1	0.0	
chr7	43097961	43098141	reg1029319.p1	3.396	+	AB049649 NM_031903 TSC_hg19_v1_chr7_+_42971975 AK090551 AX746505 BC013147 AK313393 CU680524 AF161401	-126082	+	AK290654 TSC_hg19_v1_chr7_-_42971781 NM_002787	-126250	-	BC002900 AB528708 CR450317 CU690460 D00760 BC047697 TSC_hg19_v1_chr7_-_42971774 AK311369 BX641097 AK222976	-126298	-	TSC_hg19_v1_chr7_+_43152245 AB002320 BC151227 NM_015052 AK294918	54175	+	TSC_hg19_v1_chr7_+_43622706 NM_004760 BC047696 AB011420 BC023508	524643	+	BC056884 TSC_hg19_v1_chr7_-_43769123 AK023053 AK293043 AK309315 BC001743 NM_018224 AK021905 AK023007 AK308911 AK001665	671043	-	AB049649|MRPL32|64983|mitochondrial ribosomal protein L32##NM_031903|MRPL32|64983|mitochondrial ribosomal protein L32##AK090551|MRPL32|64983|mitochondrial ribosomal protein L32##BC013147|MRPL32|64983|mitochondrial ribosomal protein L32##AK313393|MRPL32|64983|mitochondrial ribosomal protein L32##AF161401|MRPL32|64983|mitochondrial ribosomal protein L32##AK290654|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##NM_002787|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC002900|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##CR450317|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##D00760|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BC047697|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##BX641097|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AK222976|PSMA2|5683|proteasome (prosome, macropain) subunit, alpha type, 2##AB002320|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##BC151227|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_015052|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##AK294918|HECW1|23072|HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1##NM_004760|STK17A|9263|serine/threonine kinase 17a##BC047696|STK17A|9263|serine/threonine kinase 17a##AB011420|STK17A|9263|serine/threonine kinase 17a##BC023508|STK17A|9263|serine/threonine kinase 17a##BC056884|C7orf44|55744|chromosome 7 open reading frame 44##AK023053|C7orf44|55744|chromosome 7 open reading frame 44##AK293043|C7orf44|55744|chromosome 7 open reading frame 44##AK309315|C7orf44|55744|chromosome 7 open reading frame 44##BC001743|C7orf44|55744|chromosome 7 open reading frame 44##NM_018224|C7orf44|55744|chromosome 7 open reading frame 44##AK021905|C7orf44|55744|chromosome 7 open reading frame 44##AK023007|C7orf44|55744|chromosome 7 open reading frame 44##AK001665|C7orf44|55744|chromosome 7 open reading frame 44	0.0	
chr7	44673179	44673358	reg1029464.p2	3.396	+	TSC_hg19_v1_chr7_+_44646225 D10523 BC004964 BC014617	-27040	+	TSC_hg19_v1_chr7_+_44646197 AK314179	-27071	+	AK304439 TSC_hg19_v1_chr7_+_44646190	-27076	+	TSC_hg19_v1_chr7_+_44788175 BC110435	114914	+	TSC_hg19_v1_chr7_+_44788465 AK090415 NM_031449	115223	+	NM_174929 BC131780 BC016968 AY426594 AF357908	122549	+	D10523|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC004964|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC014617|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##AK314179|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##AK304439|OGDH|4967|oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)##BC110435|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AK090415|ZMIZ2|83637|zinc finger, MIZ-type containing 2##NM_031449|ZMIZ2|83637|zinc finger, MIZ-type containing 2##NM_174929|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC131780|ZMIZ2|83637|zinc finger, MIZ-type containing 2##BC016968|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AY426594|ZMIZ2|83637|zinc finger, MIZ-type containing 2##AF357908|ZMIZ2|83637|zinc finger, MIZ-type containing 2	0.0	
chr9	38360373	38360439	reg1039314.p1	3.396	+	X75342 NM_003028 TSC_hg19_v1_chr9_-_38069225 BC094765	-291165	-	BC136581 BC136582 TSC_hg19_v1_chr9_-_38069194	-291265	-	TSC_hg19_v1_chr9_-_37904351 AK098185 NM_033412	-456040	-	TSC_hg19_v1_chr9_+_38392669 NM_000692	32267	+	TSC_hg19_v1_chr9_+_38392698 AK313344	32291	+	TSC_hg19_v1_chr9_+_38392760 AK297020 BC001619 AK225950	32336	+	X75342|SHB|6461|Src homology 2 domain containing adaptor protein B##NM_003028|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136581|SHB|6461|Src homology 2 domain containing adaptor protein B##BC136582|SHB|6461|Src homology 2 domain containing adaptor protein B##AK098185|MCART1|92014|mitochondrial carrier triple repeat 1##NM_033412|MCART1|92014|mitochondrial carrier triple repeat 1##NM_000692|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK313344|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK297020|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##BC001619|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1##AK225950|ALDH1B1|219|aldehyde dehydrogenase 1 family, member B1	0.0	
chr10	65115152	65115218	reg1040994.p2	3.395	+	BC126403 BC143722 TSC_hg19_v1_chr10_-_65029004 BX537954 NM_004241 BC108649	-86270	-	TSC_hg19_v1_chr10_+_64893098 AF267866 AK301656 AK225257 AK225256 AY267839 AY267840 BC011707 AB590768 EU832288 EU832373	-222039	+	TSC_hg19_v1_chr10_+_64893044 NM_030759 AK054957 AL136656	-222154	+	TSC_hg19_v1_chr10_+_65224979 BC007866 AK314171	109799	+	AK027280 EF068222 NM_032776 TSC_hg19_v1_chr10_-_65225738	110493	-	BC067238 TSC_hg19_v1_chr10_-_65225775	110590	-	BC126403|JMJD1C|221037|jumonji domain containing 1C##BC143722|JMJD1C|221037|jumonji domain containing 1C##BX537954|JMJD1C|221037|jumonji domain containing 1C##NM_004241|JMJD1C|221037|jumonji domain containing 1C##BC108649|JMJD1C|221037|jumonji domain containing 1C##AF267866|NRBF2|29982|nuclear receptor binding factor 2##AK301656|NRBF2|29982|nuclear receptor binding factor 2##AK225257|NRBF2|29982|nuclear receptor binding factor 2##AK225256|NRBF2|29982|nuclear receptor binding factor 2##AY267839|NRBF2|29982|nuclear receptor binding factor 2##AY267840|NRBF2|29982|nuclear receptor binding factor 2##BC011707|NRBF2|29982|nuclear receptor binding factor 2##EU832288|NRBF2|29982|nuclear receptor binding factor 2##EU832373|NRBF2|29982|nuclear receptor binding factor 2##NM_030759|NRBF2|29982|nuclear receptor binding factor 2##AK054957|NRBF2|29982|nuclear receptor binding factor 2##AL136656|NRBF2|29982|nuclear receptor binding factor 2##BC007866|LOC84989|84989|uncharacterized LOC84989##AK314171|LOC84989|84989|uncharacterized LOC84989##AK027280|JMJD1C|221037|jumonji domain containing 1C##EF068222|JMJD1C|221037|jumonji domain containing 1C##NM_032776|JMJD1C|221037|jumonji domain containing 1C##BC067238|JMJD1C|221037|jumonji domain containing 1C	0.0	
chr10	91397146	91397326	reg1032964.p2	3.395	+	CR936657 AK127303 NM_213606	-101925	-	U34605 TSC_hg19_v1_chr10_+_91174502 AK312358 AK293346	-222748	+	TSC_hg19_v1_chr10_+_91174324 NM_012420 BC025786	-222893	+	AF355198 AY027662 AY027663 NM_138316 NM_148978	6402	-	TSC_hg19_v1_chr10_-_91404973 AK125428	7707	-	TSC_hg19_v1_chr10_-_91405320 AY027661 NM_148977	8088	-	CR936657|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##AK127303|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##NM_213606|SLC16A12|387700|solute carrier family 16, member 12 (monocarboxylic acid transporter 12)##U34605|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK312358|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK293346|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##NM_012420|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##BC025786|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AF355198|PANK1|53354|pantothenate kinase 1##AY027662|PANK1|53354|pantothenate kinase 1##AY027663|PANK1|53354|pantothenate kinase 1##NM_138316|PANK1|53354|pantothenate kinase 1##NM_148978|PANK1|53354|pantothenate kinase 1##AK125428|PANK1|53354|pantothenate kinase 1##AY027661|PANK1|53354|pantothenate kinase 1##NM_148977|PANK1|53354|pantothenate kinase 1	0.0	
chr1	139182	139315	reg1037173.p2	3.395	+	NM_001005484	-70158	+	TSC_hg19_v1_chr1_-_29330 AK095183 BC027921 AK092583 AK300161 AK308540 AK308566 AK309926 AK310121 AK310139 AX747611 BC063470 AK291582 BC047449 AK308574 AK302089 AL137714	-109843	-	None	None	None	BC137547 BC137568 NM_001005221 NM_001005224 NM_001005277	228400	+	NM_001005221 NM_001005224 NM_001005277 BC137547 BC137568	482794	-	TSC_hg19_v1_chr1_-_714015 BC006361	574769	-	NM_001005484|OR4F5|79501|olfactory receptor, family 4, subfamily F, member 5##AK095183|WASH3P|374666|WAS protein family homolog 3 pseudogene##BC027921|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK092583|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK300161|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308540|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK308566|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK309926|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310121|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK310139|WASH7P|653635|WAS protein family homolog 7 pseudogene##BC063470|WASH7P|653635|WAS protein family homolog 7 pseudogene##AK291582|WASH3P|374666|WAS protein family homolog 3 pseudogene##AK308574|WASH2P|375260|WAS protein family homolog 2 pseudogene##AK302089|WASH7P|653635|WAS protein family homolog 7 pseudogene##AL137714|WASH2P|375260|WAS protein family homolog 2 pseudogene##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##NM_001005221|OR4F29|729759|olfactory receptor, family 4, subfamily F, member 29##NM_001005224|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##NM_001005277|OR4F16|81399|olfactory receptor, family 4, subfamily F, member 16##BC137547|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC137568|OR4F3|26683|olfactory receptor, family 4, subfamily F, member 3##BC006361|LOC100288069|100288069|general transcription factor IIi pseudogene	0.873411	CTCF.p2:-9:0.873
chr11	65679375	65679481	reg1038685.p1	3.395	+	TSC_hg19_v1_chr11_-_65667860 AK299050 AK313718 NM_005438	-11480	-	AK293297 TSC_hg19_v1_chr11_-_65667859	-11570	-	CR542257 CR542278 AB463654 DQ891054 DQ892703 DQ893332 DQ894233 DQ896648 EU176469 CU677659 TSC_hg19_v1_chr11_-_65667855 S68214 X16707 AK222902 BC016648	-11596	-	AF073483 TSC_hg19_v1_chr11_-_65686528 BC013185 NM_001135635 NM_031450	7070	-	NM_006442 TSC_hg19_v1_chr11_+_65686745	7311	+	TSC_hg19_v1_chr11_+_65686920 BC010025 AB463581 CU679579 EU446936 X96506	7531	+	AK299050|FOSL1|8061|FOS-like antigen 1##AK313718|FOSL1|8061|FOS-like antigen 1##NM_005438|FOSL1|8061|FOS-like antigen 1##AK293297|FOSL1|8061|FOS-like antigen 1##CR542257|FOSL1|8061|FOS-like antigen 1##CR542278|FOSL1|8061|FOS-like antigen 1##DQ891054|FOSL1|8061|FOS-like antigen 1##DQ892703|FOSL1|8061|FOS-like antigen 1##DQ893332|FOSL1|8061|FOS-like antigen 1##DQ894233|FOSL1|8061|FOS-like antigen 1##DQ896648|FOSL1|8061|FOS-like antigen 1##EU176469|FOSL1|8061|FOS-like antigen 1##X16707|FOSL1|8061|FOS-like antigen 1##AK222902|FOSL1|8061|FOS-like antigen 1##BC016648|FOSL1|8061|FOS-like antigen 1##AF073483|C11orf68|83638|chromosome 11 open reading frame 68##BC013185|C11orf68|83638|chromosome 11 open reading frame 68##NM_001135635|C11orf68|83638|chromosome 11 open reading frame 68##NM_031450|C11orf68|83638|chromosome 11 open reading frame 68##NM_006442|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##BC010025|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##EU446936|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)##X96506|DRAP1|10589|DR1-associated protein 1 (negative cofactor 2 alpha)	0.986173	CTCF.p2:-2:0.986
chr1	178969455	178969552	reg1037597.p1	3.395	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	-129357	-	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	-275130	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-487237	+	TSC_hg19_v1_chr1_+_178995028 AB007944	25517	+	TSC_hg19_v1_chr1_+_178995055 AB480690 BC051794 NM_014864	25561	+	AK289989 BC046441 TSC_hg19_v1_chr1_+_178995259	25715	+	AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AB007944|FAM20B|9917|family with sequence similarity 20, member B##AB480690|FAM20B|9917|family with sequence similarity 20, member B##BC051794|FAM20B|9917|family with sequence similarity 20, member B##NM_014864|FAM20B|9917|family with sequence similarity 20, member B##AK289989|FAM20B|9917|family with sequence similarity 20, member B##BC046441|FAM20B|9917|family with sequence similarity 20, member B	0.0	
chr1	40282884	40283065	reg1002397.p3	3.395	+	TSC_hg19_v1_chr1_-_40254528 AY303955 NM_001720	-28448	-	TSC_hg19_v1_chr1_-_40254516 BC108678	-28459	-	BC023526 TSC_hg19_v1_chr1_-_40254233	-28785	-	AY702933 AY702934 AY702935 AY702936 AY702937 AY702938 AY702939 AY702940 AY702941 AY702942 AY702943 AY702944 AY702945 AY702946 AY702947 TSC_hg19_v1_chr1_-_40349138 AY052768 BC010741	66150	-	AK296453 AK307910 TSC_hg19_v1_chr1_-_40349167	66193	-	TSC_hg19_v1_chr1_-_40349179 AK223478 AK304759 AY303390 BC128155 BC128156 NM_017646 BC107569	66200	-	AY303955|BMP8B|656|bone morphogenetic protein 8b##NM_001720|BMP8B|656|bone morphogenetic protein 8b##BC108678|BMP8B|656|bone morphogenetic protein 8b##BC023526|BMP8B|656|bone morphogenetic protein 8b##AY702933|TRIT1|54802|tRNA isopentenyltransferase 1##AY702934|TRIT1|54802|tRNA isopentenyltransferase 1##AY702935|TRIT1|54802|tRNA isopentenyltransferase 1##AY702936|TRIT1|54802|tRNA isopentenyltransferase 1##AY702937|TRIT1|54802|tRNA isopentenyltransferase 1##AY702938|TRIT1|54802|tRNA isopentenyltransferase 1##AY702939|TRIT1|54802|tRNA isopentenyltransferase 1##AY702940|TRIT1|54802|tRNA isopentenyltransferase 1##AY702941|TRIT1|54802|tRNA isopentenyltransferase 1##AY702942|TRIT1|54802|tRNA isopentenyltransferase 1##AY702943|TRIT1|54802|tRNA isopentenyltransferase 1##AY702944|TRIT1|54802|tRNA isopentenyltransferase 1##AY702945|TRIT1|54802|tRNA isopentenyltransferase 1##AY702946|TRIT1|54802|tRNA isopentenyltransferase 1##AY702947|TRIT1|54802|tRNA isopentenyltransferase 1##AY052768|TRIT1|54802|tRNA isopentenyltransferase 1##BC010741|TRIT1|54802|tRNA isopentenyltransferase 1##AK296453|TRIT1|54802|tRNA isopentenyltransferase 1##AK307910|TRIT1|54802|tRNA isopentenyltransferase 1##AK223478|TRIT1|54802|tRNA isopentenyltransferase 1##AK304759|TRIT1|54802|tRNA isopentenyltransferase 1##AY303390|TRIT1|54802|tRNA isopentenyltransferase 1##BC128155|TRIT1|54802|tRNA isopentenyltransferase 1##BC128156|TRIT1|54802|tRNA isopentenyltransferase 1##NM_017646|TRIT1|54802|tRNA isopentenyltransferase 1##BC107569|TRIT1|54802|tRNA isopentenyltransferase 1	0.0	
chr16	68452071	68452138	reg1038229.p2	3.395	+	TSC_hg19_v1_chr16_+_68344946 NM_001184824 NM_019023 AK001502 AK304605 AK056647	-107145	+	TSC_hg19_v1_chr16_-_68344850 BC013778 AK023353 AK091674 AK225712 AY078070 NM_032178	-107278	-	TSC_hg19_v1_chr16_+_68298430 NM_001076785 NM_003983 CR749291 CR749475 AK310866 BC028216	-153654	+	TSC_hg19_v1_chr16_-_68482409 AK289651 NM_018667 BC041828	30377	-	TSC_hg19_v1_chr16_+_68564035 BC040871	111929	+	BC140886 BC140887 TSC_hg19_v1_chr16_+_68573199 AX721106 AX721146 AK316251 AK074332 AK304152 BC040486	121094	+	NM_001184824|PRMT7|54496|protein arginine methyltransferase 7##NM_019023|PRMT7|54496|protein arginine methyltransferase 7##AK001502|PRMT7|54496|protein arginine methyltransferase 7##AK304605|PRMT7|54496|protein arginine methyltransferase 7##AK056647|PRMT7|54496|protein arginine methyltransferase 7##BC013778|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK023353|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK091674|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AK225712|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##AY078070|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_032178|SLC7A6OS|84138|solute carrier family 7, member 6 opposite strand##NM_001076785|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##NM_003983|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749291|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##CR749475|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK310866|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##BC028216|SLC7A6|9057|solute carrier family 7 (amino acid transporter light chain, y+L system), member 6##AK289651|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##NM_018667|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC041828|SMPD3|55512|sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)##BC040871|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140886|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC140887|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK316251|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK074332|ZFP90|146198|zinc finger protein 90 homolog (mouse)##AK304152|ZFP90|146198|zinc finger protein 90 homolog (mouse)##BC040486|ZFP90|146198|zinc finger protein 90 homolog (mouse)	0.0	
chr17	74478056	74478129	reg1032265.p1	3.395	+	NM_001088 U40347 AB593119 BC069434	-14435	+	BC092430 NM_001166579	-28660	+	TSC_hg19_v1_chr17_-_74449273 AB051521 NM_022066	-28804	-	AK303434 AY500247 AK292166 NM_001005498	5806	-	TSC_hg19_v1_chr17_-_74497506 BC016034 AK292135 NM_024599	19367	-	AJ315162 AK098057 BC029798 AB057769 BC018822 NM_134268	55610	-	NM_001088|AANAT|15|aralkylamine N-acetyltransferase##U40347|AANAT|15|aralkylamine N-acetyltransferase##AB593119|AANAT|15|aralkylamine N-acetyltransferase##BC069434|AANAT|15|aralkylamine N-acetyltransferase##BC092430|AANAT|15|aralkylamine N-acetyltransferase##NM_001166579|AANAT|15|aralkylamine N-acetyltransferase##AB051521|UBE2O|63893|ubiquitin-conjugating enzyme E2O##NM_022066|UBE2O|63893|ubiquitin-conjugating enzyme E2O##AK303434|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AY500247|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292166|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_001005498|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##BC016034|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AK292135|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##NM_024599|RHBDF2|79651|rhomboid 5 homolog 2 (Drosophila)##AJ315162|CYGB|114757|cytoglobin##AK098057|CYGB|114757|cytoglobin##BC029798|CYGB|114757|cytoglobin##AB057769|CYGB|114757|cytoglobin##NM_134268|CYGB|114757|cytoglobin	0.0	
chr18	12948500	12948567	reg1042287.p2	3.395	+	TSC_hg19_v1_chr18_+_12948029 AF136976 AK056940 AK291226 BC012430 AF255625 AF431970 AF514996 CU680322	-469	+	TSC_hg19_v1_chr18_+_12948009 AK314403	-527	+	TSC_hg19_v1_chr18_+_12947986 NM_001013437 NM_031216	-548	+	TSC_hg19_v1_chr18_+_12991360 AK096548 NM_032142	42812	+	TSC_hg19_v1_chr18_+_13218783 NM_181481 NM_181482 BC030199	270252	+	NM_001003674 NM_001003675	663131	+	AF136976|SEH1L|81929|SEH1-like (S. cerevisiae)##AK056940|SEH1L|81929|SEH1-like (S. cerevisiae)##AK291226|SEH1L|81929|SEH1-like (S. cerevisiae)##BC012430|SEH1L|81929|SEH1-like (S. cerevisiae)##AF255625|SEH1L|81929|SEH1-like (S. cerevisiae)##AF431970|SEH1L|81929|SEH1-like (S. cerevisiae)##AF514996|SEH1L|81929|SEH1-like (S. cerevisiae)##AK314403|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_001013437|SEH1L|81929|SEH1-like (S. cerevisiae)##NM_031216|SEH1L|81929|SEH1-like (S. cerevisiae)##AK096548|CEP192|55125|centrosomal protein 192kDa##NM_032142|CEP192|55125|centrosomal protein 192kDa##NM_181481|C18orf1|753|chromosome 18 open reading frame 1##NM_181482|C18orf1|753|chromosome 18 open reading frame 1##BC030199|C18orf1|753|chromosome 18 open reading frame 1##NM_001003674|C18orf1|753|chromosome 18 open reading frame 1##NM_001003675|C18orf1|753|chromosome 18 open reading frame 1	0.0	
chr18	712537	712604	reg1023411.p2	3.395	+	AB464497 AK289986 BC028301 NM_001012716	-54278	-	BC002567 TSC_hg19_v1_chr18_+_657708 BC018858 AK292620 AB590362 DQ892149 AB077207 AB077208 BT006811	-54859	+	AB062290 TSC_hg19_v1_chr18_+_657656 AK314140 X02308	-54922	+	TSC_hg19_v1_chr18_-_712601 NM_202758 X67098 X89602 AK127818 BX648215 AK295850 AK292780 AK309035 BC001285 NM_001126123 NM_017512	12	-	TSC_hg19_v1_chr18_-_812273 AK314063 BC048960 BC031080 NM_005433	99733	-	AK313050 NM_001099733	192373	+	AK289986|C18orf56|494514|chromosome 18 open reading frame 56##BC028301|C18orf56|494514|chromosome 18 open reading frame 56##NM_001012716|C18orf56|494514|chromosome 18 open reading frame 56##BC002567|TYMS|7298|thymidylate synthetase##BC018858|TYMS|7298|thymidylate synthetase##AK292620|TYMS|7298|thymidylate synthetase##DQ892149|TYMS|7298|thymidylate synthetase##AB077207|TYMS|7298|thymidylate synthetase##AB077208|TYMS|7298|thymidylate synthetase##BT006811|TYMS|7298|thymidylate synthetase##AB062290|TYMS|7298|thymidylate synthetase##AK314140|TYMS|7298|thymidylate synthetase##X02308|TYMS|7298|thymidylate synthetase##NM_202758|ENOSF1|55556|enolase superfamily member 1##X67098|ENOSF1|55556|enolase superfamily member 1##X89602|ENOSF1|55556|enolase superfamily member 1##AK127818|ENOSF1|55556|enolase superfamily member 1##BX648215|ENOSF1|55556|enolase superfamily member 1##AK295850|ENOSF1|55556|enolase superfamily member 1##AK292780|ENOSF1|55556|enolase superfamily member 1##AK309035|ENOSF1|55556|enolase superfamily member 1##BC001285|ENOSF1|55556|enolase superfamily member 1##NM_001126123|ENOSF1|55556|enolase superfamily member 1##NM_017512|ENOSF1|55556|enolase superfamily member 1##AK314063|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC048960|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##BC031080|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##NM_005433|YES1|7525|v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1##AK313050|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)##NM_001099733|ADCYAP1|116|adenylate cyclase activating polypeptide 1 (pituitary)	0.0	
chr22	23668672	23668792	reg1045956.p1	3.395	+	TSC_hg19_v1_chr22_+_23540316 X14677 X14675	-128327	+	TSC_hg19_v1_chr22_+_23523013 X06418 EU216058 EU216059 EU216061 EU216062 EU216063 EU216064 EU216065 EU216067 EU216068 EU216069 EU216070 EU216072	-145683	+	TSC_hg19_v1_chr22_+_23522745 AB209991	-145932	+	TSC_hg19_v1_chr22_-_23744738 AK056130 AK092581 AX747609 AK092530 AX747585	76011	-	AB528384 DQ893578 DQ894640 BC030239 BC012293 M27749 NM_020070 NM_152855	253703	-	BC056888 AL080197 BC063390 AK310349 NM_016449	305764	-	X06418|BCR|613|breakpoint cluster region##EU216058|BCR|613|breakpoint cluster region##EU216059|BCR|613|breakpoint cluster region##EU216061|BCR|613|breakpoint cluster region##EU216062|BCR|613|breakpoint cluster region##EU216063|BCR|613|breakpoint cluster region##EU216064|BCR|613|breakpoint cluster region##EU216067|BCR|613|breakpoint cluster region##EU216069|BCR|613|breakpoint cluster region##EU216070|BCR|613|breakpoint cluster region##AB209991|BCR|613|breakpoint cluster region##AK056130|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092581|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##AK092530|ZDHHC8P1|150244|zinc finger, DHHC-type containing 8 pseudogene 1##DQ893578|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##DQ894640|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC030239|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC012293|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##M27749|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_020070|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##NM_152855|IGLL1|3543|immunoglobulin lambda-like polypeptide 1##BC056888|C22orf43|51233|chromosome 22 open reading frame 43##AL080197|C22orf43|51233|chromosome 22 open reading frame 43##BC063390|C22orf43|51233|chromosome 22 open reading frame 43##AK310349|C22orf43|51233|chromosome 22 open reading frame 43##NM_016449|C22orf43|51233|chromosome 22 open reading frame 43	0.827011	CTCF.p2:-19:0.827
chr2	74667541	74667707	reg1039449.p1	3.395	+	AK023015 AK222696 TSC_hg19_v1_chr2_+_74648856 BC032428 AK311621 BC051848 NM_032118 BC051753	-18750	+	NM_001145054	-22781	-	TSC_hg19_v1_chr2_-_74619172 NM_001190836	-48452	-	TSC_hg19_v1_chr2_-_74667581 AK307302 AF290512 NM_001015056 NM_033046	7	-	BC004558 TSC_hg19_v1_chr2_-_74669019 AK308519	1390	-	TSC_hg19_v1_chr2_-_74669029 AF049227 AK310036	1412	-	AK023015|WDR54|84058|WD repeat domain 54##AK222696|WDR54|84058|WD repeat domain 54##BC032428|WDR54|84058|WD repeat domain 54##AK311621|WDR54|84058|WD repeat domain 54##BC051848|WDR54|84058|WD repeat domain 54##NM_032118|WDR54|84058|WD repeat domain 54##BC051753|WDR54|84058|WD repeat domain 54##NM_001145054|C2orf81|388963|chromosome 2 open reading frame 81##NM_001190836|DCTN1|1639|dynactin 1##AK307302|RTKN|6242|rhotekin##AF290512|RTKN|6242|rhotekin##NM_001015056|RTKN|6242|rhotekin##NM_033046|RTKN|6242|rhotekin##BC004558|RTKN|6242|rhotekin##AK308519|RTKN|6242|rhotekin##AF049227|RTKN|6242|rhotekin	0.014474	
chr2	9232641	9232821	reg1030714.p2	3.395	+	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	-88910	-	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	-255012	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	-410528	+	TSC_hg19_v1_chr2_+_9346906 AB007860 NM_001135191 NM_003887	114161	+	TSC_hg19_v1_chr2_+_9346940 BC063308	114228	+	TSC_hg19_v1_chr2_-_9563308 AK093179	330611	-	AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AB007860|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_001135191|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##NM_003887|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##BC063308|ASAP2|8853|ArfGAP with SH3 domain, ankyrin repeat and PH domain 2##AK093179|ITGB1BP1|9270|integrin beta 1 binding protein 1	0.0	
chr3	41012672	41012795	reg1030464.p1	3.395	+	TSC_hg19_v1_chr3_+_40566471 BC101619 BC113415 CR749268	-446233	+	TSC_hg19_v1_chr3_+_40566380 AK127181 NM_001098414 NM_198484 AX721066 AK074366	-446331	+	AK131232 AX721156 NM_175888 AK093599 AX748220 TSC_hg19_v1_chr3_+_40547598	-465149	+	TSC_hg19_v1_chr3_+_41240969 NM_001098209 NM_001098210 NM_001904 AK294778	228216	+	AK296790 AK314776 X87838 TSC_hg19_v1_chr3_+_41240995 BC058926 Z19054 AK299954	228291	+	BC014794 TSC_hg19_v1_chr3_-_42003564 AK304341 AK000581 NM_017886	990826	-	BC101619|ZNF621|285268|zinc finger protein 621##BC113415|ZNF621|285268|zinc finger protein 621##CR749268|ZNF621|285268|zinc finger protein 621##AK127181|ZNF621|285268|zinc finger protein 621##NM_001098414|ZNF621|285268|zinc finger protein 621##NM_198484|ZNF621|285268|zinc finger protein 621##AK074366|ZNF621|285268|zinc finger protein 621##AK131232|ZNF620|253639|zinc finger protein 620##NM_175888|ZNF620|253639|zinc finger protein 620##AK093599|ZNF620|253639|zinc finger protein 620##NM_001098209|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001098210|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##NM_001904|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK294778|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK296790|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK314776|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##X87838|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC058926|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##Z19054|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##AK299954|CTNNB1|1499|catenin (cadherin-associated protein), beta 1, 88kDa##BC014794|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK304341|ULK4|54986|unc-51-like kinase 4 (C. elegans)##AK000581|ULK4|54986|unc-51-like kinase 4 (C. elegans)##NM_017886|ULK4|54986|unc-51-like kinase 4 (C. elegans)	0.0	
chr6	1537940	1538037	reg1045493.p1	3.395	+	NM_001452 U13220 AB463646	-147863	+	BC053850 NM_033260	-225314	+	TSC_hg19_v1_chr6_-_693110 AJ414403 AL833213 AK056564 NM_018303 BC080542 AK302941 AK314628	-844898	-	BC134421 NM_001453	72692	+	TSC_hg19_v1_chr6_+_1611545 BC169307	73586	+	AF040260 NM_001253846	638236	-	NM_001452|FOXF2|2295|forkhead box F2##U13220|FOXF2|2295|forkhead box F2##BC053850|FOXQ1|94234|forkhead box Q1##NM_033260|FOXQ1|94234|forkhead box Q1##AJ414403|EXOC2|55770|exocyst complex component 2##AL833213|EXOC2|55770|exocyst complex component 2##AK056564|EXOC2|55770|exocyst complex component 2##NM_018303|EXOC2|55770|exocyst complex component 2##BC080542|EXOC2|55770|exocyst complex component 2##AK302941|EXOC2|55770|exocyst complex component 2##AK314628|EXOC2|55770|exocyst complex component 2##BC134421|FOXC1|2296|forkhead box C1##NM_001453|FOXC1|2296|forkhead box C1##BC169307|FOXC1|2296|forkhead box C1##AF040260|GMDS|2762|GDP-mannose 4,6-dehydratase##NM_001253846|GMDS|2762|GDP-mannose 4,6-dehydratase	0.0	
chr6_ssto_hap7	146010	146152	reg1043063.p2	3.395	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr8	73825410	73825522	reg1041852.p1	3.395	+	AF338730 NM_004770 AK311263 TSC_hg19_v1_chr8_+_73449652	-375823	+	TSC_hg19_v1_chr8_-_72987818 NM_007332 Y10601 AK307942	-837632	-	AK313102 TSC_hg19_v1_chr8_-_72756692 BC006313 BC067827 NM_005098	-1068758	-	TSC_hg19_v1_chr8_+_73921144 NM_003218 NM_017489 AK292529 AF003001 U40705 BC014646 BC029378 BC071975 CU688638 DQ892573 DQ895789 U74382 AK128828 AY576778	95646	+	TSC_hg19_v1_chr8_-_74005379 AY040546 AK292970 BC042877 NM_153225	179976	-	BC150551 BC150552 NM_001243237	346270	-	AF338730|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_004770|KCNB2|9312|potassium voltage-gated channel, Shab-related subfamily, member 2##NM_007332|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##Y10601|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK307942|TRPA1|8989|transient receptor potential cation channel, subfamily A, member 1##AK313102|MSC|9242|musculin##BC006313|MSC|9242|musculin##BC067827|MSC|9242|musculin##NM_005098|MSC|9242|musculin##NM_003218|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##NM_017489|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AK292529|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AF003001|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U40705|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC014646|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC029378|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##BC071975|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ892573|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##DQ895789|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##U74382|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY576778|TERF1|7013|telomeric repeat binding factor (NIMA-interacting) 1##AY040546|C8orf84|157869|chromosome 8 open reading frame 84##AK292970|C8orf84|157869|chromosome 8 open reading frame 84##BC042877|C8orf84|157869|chromosome 8 open reading frame 84##NM_153225|C8orf84|157869|chromosome 8 open reading frame 84##BC150551|LOC100130301|100130301|uncharacterized LOC100130301##BC150552|LOC100130301|100130301|uncharacterized LOC100130301##NM_001243237|LOC100130301|100130301|uncharacterized LOC100130301	0.19545	
chr10	52226844	52226956	reg1036067.p1	3.394	+	AF250847 BC107105 AF449759 NM_001143974 NM_019893	-218560	-	NM_018232	-389015	+	TSC_hg19_v1_chr10_+_51827713 AK304116 BC082258 BC064639	-399178	+	AY332650 AY364088 TSC_hg19_v1_chr10_-_52383684 AY280959 NM_147156	156803	-	AK294369 TSC_hg19_v1_chr10_+_52499704 NM_001079516	272810	+	BC022263 AF209192 AK291982 AK303801 TSC_hg19_v1_chr10_-_52645388	418493	-	AF250847|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##BC107105|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##AF449759|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_001143974|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_019893|ASAH2|56624|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2##NM_018232|FAM21B|55747|family with sequence similarity 21, member B##AK304116|FAM21A|387680|family with sequence similarity 21, member A##BC082258|FAM21A|387680|family with sequence similarity 21, member A##BC064639|FAM21A|387680|family with sequence similarity 21, member A##AY332650|SGMS1|259230|sphingomyelin synthase 1##AY364088|SGMS1|259230|sphingomyelin synthase 1##AY280959|SGMS1|259230|sphingomyelin synthase 1##NM_147156|SGMS1|259230|sphingomyelin synthase 1##NM_001079516|ASAH2B|653308|N-acylsphingosine amidohydrolase (non-lysosomal ceramidase) 2B##BC022263|A1CF|29974|APOBEC1 complementation factor##AF209192|A1CF|29974|APOBEC1 complementation factor##AK291982|A1CF|29974|APOBEC1 complementation factor##AK303801|A1CF|29974|APOBEC1 complementation factor	0.0	
chr1	210758072	210758253	reg1002419.p2	3.394	+	NM_001170580 BC051191	-255521	+	TSC_hg19_v1_chr1_+_210502212 NM_001170587 NM_001170588 NM_018194 AK299200 AK001586 AK295130 AK298991 AK302955 AK316190 BC039071	-255897	+	NM_001122834 NM_001170564 AK297193	-256566	+	AF078741 AF078742 BC113709 BC143599 TSC_hg19_v1_chr1_-_211307437 AJ001366 NM_002238 NM_172362	549223	-	TSC_hg19_v1_chr1_+_211432710 NM_001136223 NM_001136224 NM_001136225	674546	+	TSC_hg19_v1_chr1_+_211432726 AK131312	674565	+	NM_001170580|HHAT|55733|hedgehog acyltransferase##BC051191|HHAT|55733|hedgehog acyltransferase##NM_001170587|HHAT|55733|hedgehog acyltransferase##NM_001170588|HHAT|55733|hedgehog acyltransferase##NM_018194|HHAT|55733|hedgehog acyltransferase##AK299200|HHAT|55733|hedgehog acyltransferase##AK001586|HHAT|55733|hedgehog acyltransferase##AK295130|HHAT|55733|hedgehog acyltransferase##AK298991|HHAT|55733|hedgehog acyltransferase##AK302955|HHAT|55733|hedgehog acyltransferase##AK316190|HHAT|55733|hedgehog acyltransferase##BC039071|HHAT|55733|hedgehog acyltransferase##NM_001122834|HHAT|55733|hedgehog acyltransferase##NM_001170564|HHAT|55733|hedgehog acyltransferase##AK297193|HHAT|55733|hedgehog acyltransferase##AF078741|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AF078742|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC113709|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##BC143599|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##AJ001366|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_002238|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_172362|KCNH1|3756|potassium voltage-gated channel, subfamily H (eag-related), member 1##NM_001136223|RCOR3|55758|REST corepressor 3##NM_001136224|RCOR3|55758|REST corepressor 3##NM_001136225|RCOR3|55758|REST corepressor 3##AK131312|RCOR3|55758|REST corepressor 3	0.0	
chr12	85862374	85862483	reg1009573.p1	3.394	+	U31986 TSC_hg19_v1_chr12_+_85673999 BC010923 NM_006982	-188469	+	AK022365 NM_001079910 BC005399 BC093088 AK307799	-432305	+	AK126325 NM_001100917	-432374	-	DQ890787 DQ893943 AF056209 TSC_hg19_v1_chr12_-_86230094 BC031589	367617	-	AK022089 TSC_hg19_v1_chr12_-_86230188 NM_005447	367809	-	AK312066 NM_006183 BC010918 AF157682 U91618 AB587429 CR541936 CU679849	405698	+	U31986|ALX1|8092|ALX homeobox 1##BC010923|ALX1|8092|ALX homeobox 1##NM_006982|ALX1|8092|ALX homeobox 1##AK022365|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##NM_001079910|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC005399|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##BC093088|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK307799|LRRIQ1|84125|leucine-rich repeats and IQ motif containing 1##AK126325|TSPAN19|144448|tetraspanin 19##NM_001100917|TSPAN19|144448|tetraspanin 19##DQ890787|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##DQ893943|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AF056209|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##BC031589|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK022089|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##NM_005447|RASSF9|9182|Ras association (RalGDS/AF-6) domain family (N-terminal) member 9##AK312066|NTS|4922|neurotensin##NM_006183|NTS|4922|neurotensin##BC010918|NTS|4922|neurotensin##AF157682|NTS|4922|neurotensin##U91618|NTS|4922|neurotensin##CR541936|NTS|4922|neurotensin	0.0	
chr13	114790028	114790094	reg1038222.p1	3.394	+	TSC_hg19_v1_chr13_-_114567041 NM_000820	-223018	-	TSC_hg19_v1_chr13_-_114567037 BC030708	-223025	-	TSC_hg19_v1_chr13_-_114567011 BC038984 L13720	-223040	-	AB385165 TSC_hg19_v1_chr13_-_114898005 AK289746 X89399	107925	-	TSC_hg19_v1_chr13_-_114898028 AK295861 AK313795	107964	-	TSC_hg19_v1_chr13_-_114898058 AK128094	108005	-	NM_000820|GAS6|2621|growth arrest-specific 6##BC030708|GAS6|2621|growth arrest-specific 6##BC038984|GAS6|2621|growth arrest-specific 6##L13720|GAS6|2621|growth arrest-specific 6##AK289746|RASA3|22821|RAS p21 protein activator 3##X89399|RASA3|22821|RAS p21 protein activator 3##AK295861|RASA3|22821|RAS p21 protein activator 3##AK313795|RASA3|22821|RAS p21 protein activator 3##AK128094|RASA3|22821|RAS p21 protein activator 3	0.0	
chr15	44069669	44069779	reg1038975.p1	3.394	+	NM_025165	-223	-	TSC_hg19_v1_chr15_+_44069338 NM_001199877 BC009869	-419	+	TSC_hg19_v1_chr15_+_44038685 U42068 D16234 D83485 AB527303 CU690254 DQ893070 DQ896325	-30942	+	BC008214 NM_001018108 NM_001199875 NM_001199876 TSC_hg19_v1_chr15_+_44084335	14495	+	TSC_hg19_v1_chr15_+_44084493 AL049976 AF073298	14780	+	TSC_hg19_v1_chr15_+_44084524 AF320073 BC022326 AK000479 AK307547 BC015491 AK000438 AK095876 BC038893 NM_001199878	14821	+	NM_025165|ELL3|80237|elongation factor RNA polymerase II-like 3##NM_001199877|SERF2|10169|small EDRK-rich factor 2##BC009869|SERF2|10169|small EDRK-rich factor 2##U42068|PDIA3|2923|protein disulfide isomerase family A, member 3##D16234|PDIA3|2923|protein disulfide isomerase family A, member 3##D83485|PDIA3|2923|protein disulfide isomerase family A, member 3##DQ893070|PDIA3|2923|protein disulfide isomerase family A, member 3##DQ896325|PDIA3|2923|protein disulfide isomerase family A, member 3##BC008214|SERF2|10169|small EDRK-rich factor 2##NM_001018108|SERF2|10169|small EDRK-rich factor 2##NM_001199875|SERF2|10169|small EDRK-rich factor 2##NM_001199876|SERF2|10169|small EDRK-rich factor 2##AL049976|SERF2|10169|small EDRK-rich factor 2##AF073298|SERF2|10169|small EDRK-rich factor 2##AF320073|SERF2|10169|small EDRK-rich factor 2##BC022326|SERF2|10169|small EDRK-rich factor 2##AK000479|SERF2|10169|small EDRK-rich factor 2##AK307547|SERF2|10169|small EDRK-rich factor 2##BC015491|SERF2|10169|small EDRK-rich factor 2##AK000438|SERF2-C15ORF63|100529067|SERF2-C15orf63 readthrough##AK095876|SERF2-C15ORF63|100529067|SERF2-C15orf63 readthrough##BC038893|SERF2|10169|small EDRK-rich factor 2##NM_001199878|SERF2|10169|small EDRK-rich factor 2	0.246152	CTCF.p2:43:0.233
chr15	89185088	89185195	reg1040106.p1	3.394	+	BC007922 NM_002201 AK307769 TSC_hg19_v1_chr15_+_89182194 BC016341 U88964	-2955	+	TSC_hg19_v1_chr15_+_89164583 NM_022767 AK308119 BC020988 AF318330	-20571	+	BC109060 BC109061 BC073867 AK054603 BC064591 AB073887 NM_001144074 NM_017996	-95290	-	TSC_hg19_v1_chr15_+_89346707 U13192 AK290723 NM_001135 NM_013227 BC036445	161545	+	AY358500 AY037161 TSC_hg19_v1_chr15_-_89438761 BC053689 AY262759 NM_178232 AK292055 BC062320 AK292103	253657	-	BT006948 EU832670 EU832749 CU678532 TSC_hg19_v1_chr15_-_89456571	271419	-	BC007922|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_002201|ISG20|3669|interferon stimulated exonuclease gene 20kDa##AK307769|ISG20|3669|interferon stimulated exonuclease gene 20kDa##BC016341|ISG20|3669|interferon stimulated exonuclease gene 20kDa##U88964|ISG20|3669|interferon stimulated exonuclease gene 20kDa##NM_022767|AEN|64782|apoptosis enhancing nuclease##AK308119|AEN|64782|apoptosis enhancing nuclease##BC020988|AEN|64782|apoptosis enhancing nuclease##AF318330|AEN|64782|apoptosis enhancing nuclease##BC109060|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC109061|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC073867|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AK054603|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##BC064591|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##AB073887|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_001144074|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##NM_017996|DET1|55070|de-etiolated homolog 1 (Arabidopsis)##U13192|ACAN|176|aggrecan##AK290723|ACAN|176|aggrecan##NM_001135|ACAN|176|aggrecan##NM_013227|ACAN|176|aggrecan##BC036445|ACAN|176|aggrecan##AY358500|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY037161|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC053689|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AY262759|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##NM_178232|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292055|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BC062320|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##AK292103|HAPLN3|145864|hyaluronan and proteoglycan link protein 3##BT006948|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832670|MFGE8|4240|milk fat globule-EGF factor 8 protein##EU832749|MFGE8|4240|milk fat globule-EGF factor 8 protein	0.0	
chr16	17562082	17562164	reg1008105.p2	3.394	+	TSC_hg19_v1_chr16_+_16326508 AB463143	-1235593	+	TSC_hg19_v1_chr16_+_16326489 BC028389	-1235635	+	TSC_hg19_v1_chr16_+_16326478 AK225803	-1235641	+	AJ539163 NM_022166 TSC_hg19_v1_chr16_-_17564780	2682	-	TSC_hg19_v1_chr16_-_18573420 AB463143 BC028389 AK225803 BC041131 AL832855 NM_001004060 NM_173614	1011268	-	TSC_hg19_v1_chr16_-_18798077 AK127316	1235973	-	BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##AJ539163|XYLT1|64131|xylosyltransferase I##NM_022166|XYLT1|64131|xylosyltransferase I##BC028389|NOMO2|283820|NODAL modulator 2##AK225803|NOMO2|283820|NODAL modulator 2##BC041131|NOMO2|283820|NODAL modulator 2##AL832855|NOMO2|283820|NODAL modulator 2##NM_001004060|NOMO2|283820|NODAL modulator 2##NM_173614|NOMO2|283820|NODAL modulator 2	0.0	
chr16	77756918	77757064	reg1031398.p2	3.394	+	NM_001105663 NM_001243657 NM_001243660 NM_001243661 TSC_hg19_v1_chr16_+_77756410 AK296963 EU981826	-558	+	AK293831 BC063283 NM_199355	-288021	-	NM_001129979 TSC_hg19_v1_chr16_+_77233375	-523630	+	TSC_hg19_v1_chr16_+_77822482 AK290153 BC033537 NM_020927 AB046796 CU689646	65498	+	AK310847 AK313316 NM_005752 BC104414 BC104415 AY358376	299459	+	NM_001244755	305994	+	NM_001105663|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243657|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243660|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##NM_001243661|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK296963|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##EU981826|NUDT7|283927|nudix (nucleoside diphosphate linked moiety X)-type motif 7##AK293831|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##BC063283|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_199355|ADAMTS18|170692|ADAM metallopeptidase with thrombospondin type 1 motif, 18##NM_001129979|SYCE1L|100130958|synaptonemal complex central element protein 1-like##AK290153|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##BC033537|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##NM_020927|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AB046796|VAT1L|57687|vesicle amine transport protein 1 homolog (T. californica)-like##AK313316|CLEC3A|10143|C-type lectin domain family 3, member A##NM_005752|CLEC3A|10143|C-type lectin domain family 3, member A##BC104414|CLEC3A|10143|C-type lectin domain family 3, member A##BC104415|CLEC3A|10143|C-type lectin domain family 3, member A##AY358376|CLEC3A|10143|C-type lectin domain family 3, member A##NM_001244755|CLEC3A|10143|C-type lectin domain family 3, member A	0.0	
chr17	55564828	55564895	reg1037748.p2	3.394	+	AK093888 AX748353 NM_170721	-230488	+	TSC_hg19_v1_chr17_+_55334093 BC001526 NM_138962 AB528970 DQ892317 DQ895519	-230888	+	NM_001242903 TSC_hg19_v1_chr17_+_55163099 AK297810 NM_001242902 AK308397	-401718	+	TSC_hg19_v1_chr17_-_55927399 AF151896 AF161447 AK312729 BC000242 NM_016070	362543	-	AK000746 NM_017949	415888	-	TSC_hg19_v1_chr17_-_56032774 BC008034 BC056882	467815	-	AK093888|MSI2|124540|musashi homolog 2 (Drosophila)##NM_170721|MSI2|124540|musashi homolog 2 (Drosophila)##BC001526|MSI2|124540|musashi homolog 2 (Drosophila)##NM_138962|MSI2|124540|musashi homolog 2 (Drosophila)##DQ892317|MSI2|124540|musashi homolog 2 (Drosophila)##DQ895519|MSI2|124540|musashi homolog 2 (Drosophila)##NM_001242903|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK297810|AKAP1|8165|A kinase (PRKA) anchor protein 1##NM_001242902|AKAP1|8165|A kinase (PRKA) anchor protein 1##AK308397|AKAP1|8165|A kinase (PRKA) anchor protein 1##AF151896|MRPS23|51649|mitochondrial ribosomal protein S23##AF161447|MRPS23|51649|mitochondrial ribosomal protein S23##AK312729|MRPS23|51649|mitochondrial ribosomal protein S23##BC000242|MRPS23|51649|mitochondrial ribosomal protein S23##NM_016070|MRPS23|51649|mitochondrial ribosomal protein S23##AK000746|CUEDC1|404093|CUE domain containing 1##NM_017949|CUEDC1|404093|CUE domain containing 1##BC056882|CUEDC1|404093|CUE domain containing 1	0.0	
chr17	64702297	64702408	reg1035944.p2	3.394	+	TSC_hg19_v1_chr17_+_64298844 NM_002737 X52479 BC109273 BC109274 AY633609 EU832768 GQ129311 AB527684 AB451258 AB451383 AB209475 M22199	-403425	+	TSC_hg19_v1_chr17_+_64298733 BC053321	-403602	+	AB527858 CU693198 TSC_hg19_v1_chr17_-_64225518 DQ891362 DQ894542 S80305 AF082883 AK313838 BC020703 X58100 AK298416 BC026283 X53595 X57847 M62839 NM_000042	-476827	-	AK290171 TSC_hg19_v1_chr17_+_64831234	128883	+	BC101633 NM_145811 BC101607 AF361351 AF458898	171068	+	TSC_hg19_v1_chr17_+_64960822 NM_014405 AF162692 AK315149 DQ891815 DQ895000 AB529113 BC034532	258537	+	NM_002737|PRKCA|5578|protein kinase C, alpha##X52479|PRKCA|5578|protein kinase C, alpha##BC109273|PRKCA|5578|protein kinase C, alpha##BC109274|PRKCA|5578|protein kinase C, alpha##AY633609|PRKCA|5578|protein kinase C, alpha##EU832768|PRKCA|5578|protein kinase C, alpha##GQ129311|PRKCA|5578|protein kinase C, alpha##AB451258|PRKCA|5578|protein kinase C, alpha##AB451383|PRKCA|5578|protein kinase C, alpha##AB209475|PRKCA|5578|protein kinase C, alpha##M22199|PRKCA|5578|protein kinase C, alpha##BC053321|PRKCA|5578|protein kinase C, alpha##DQ891362|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##DQ894542|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##S80305|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK313838|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC020703|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X58100|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK298416|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##BC026283|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X53595|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##X57847|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##M62839|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##NM_000042|APOH|350|apolipoprotein H (beta-2-glycoprotein I)##AK290171|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101633|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_145811|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##BC101607|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF361351|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##AF458898|CACNG5|27091|calcium channel, voltage-dependent, gamma subunit 5##NM_014405|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AF162692|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##AK315149|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ891815|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##DQ895000|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4##BC034532|CACNG4|27092|calcium channel, voltage-dependent, gamma subunit 4	0.0	
chr18	77196088	77196268	reg1028207.p2	3.394	+	TSC_hg19_v1_chr18_+_77160328 NM_172387 NM_172389 U59736 AK293760 U80918 X99829 EU887560 EU887562 EU887564 EU887566	-35861	+	TSC_hg19_v1_chr18_+_77155967 U08015 BC104753 BC112243 BC143457 EU887559 EU887561 EU887563 EU887565	-40083	+	U80919 TSC_hg19_v1_chr18_+_77155946	-40232	+	BC045628 TSC_hg19_v1_chr18_+_77253425	57202	+	TSC_hg19_v1_chr18_-_77439359 AK002023	243135	-	TSC_hg19_v1_chr18_-_77439740 AK098581	243563	-	NM_172387|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##NM_172389|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U59736|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK293760|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80918|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887560|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887562|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887564|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887566|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U08015|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC104753|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC112243|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC143457|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887559|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887561|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887563|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##EU887565|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##U80919|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##BC045628|NFATC1|4772|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1##AK098581|FLJ25715|284241|uncharacterized protein FLJ25715	0.0	
chr2	107078544	107078626	reg1025202.p1	3.394	+	TSC_hg19_v1_chr2_-_106810781 NM_025076	-267780	-	AK075120 AK075170 TSC_hg19_v1_chr2_-_106810758 AK122696	-267827	-	BC009819 AY147934 AY358541 TSC_hg19_v1_chr2_-_106810753 AK290668 AK304872	-267840	-	NM_001144013	6215	-	FJ433885 TSC_hg19_v1_chr2_-_107502508	423900	-	AB058780 NM_001142351 TSC_hg19_v1_chr2_-_107502624	424034	-	NM_025076|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075120|UXS1|80146|UDP-glucuronate decarboxylase 1##AK075170|UXS1|80146|UDP-glucuronate decarboxylase 1##AK122696|UXS1|80146|UDP-glucuronate decarboxylase 1##BC009819|UXS1|80146|UDP-glucuronate decarboxylase 1##AY147934|UXS1|80146|UDP-glucuronate decarboxylase 1##AY358541|UXS1|80146|UDP-glucuronate decarboxylase 1##AK290668|UXS1|80146|UDP-glucuronate decarboxylase 1##AK304872|UXS1|80146|UDP-glucuronate decarboxylase 1##NM_001144013|RGPD3|653489|RANBP2-like and GRIP domain containing 3##AB058780|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2##NM_001142351|ST6GAL2|84620|ST6 beta-galactosamide alpha-2,6-sialyltranferase 2	0.346518	CTCF.p2:-31:0.347
chr21	30608087	30608187	reg1039621.p1	3.394	+	TSC_hg19_v1_chr21_+_30517918 AK309998 EF219160	-90227	+	AY171599 NM_020152	-155265	+	AK308063 TSC_hg19_v1_chr21_-_30445995 AK298801 BC072001 BC005220 NM_006585	-162148	-	TSC_hg19_v1_chr21_+_30671158 AK291021 AB002803	63027	+	TSC_hg19_v1_chr21_+_30671217 NM_001186	63083	+	TSC_hg19_v1_chr21_+_30671242 AK313791 BC063307	63104	+	AK309998|C21orf7|56911|chromosome 21 open reading frame 7##EF219160|C21orf7|56911|chromosome 21 open reading frame 7##AY171599|C21orf7|56911|chromosome 21 open reading frame 7##NM_020152|C21orf7|56911|chromosome 21 open reading frame 7##AK308063|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK298801|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC072001|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##BC005220|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##NM_006585|CCT8|10694|chaperonin containing TCP1, subunit 8 (theta)##AK291021|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AB002803|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##NM_001186|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##AK313791|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1##BC063307|BACH1|571|BTB and CNC homology 1, basic leucine zipper transcription factor 1	0.0	
chr3	10068032	10068098	reg1043531.p1	3.394	+	TSC_hg19_v1_chr3_-_10068055 BC006266 AF230335 BC069255 BC043599 BC090925	-32	-	TSC_hg19_v1_chr3_-_10052798 AK022260 NM_001008737	-15249	-	TSC_hg19_v1_chr3_+_10028599 AK092352 AX747493	-39475	+	AK307512 TSC_hg19_v1_chr3_+_10068120 NM_001018115 NM_033084	44	+	TSC_hg19_v1_chr3_+_10068129 AF230336 AF340183	61	+	BC013582 TSC_hg19_v1_chr3_+_10068159 BC038666	95	+	BC006266|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene##BC069255|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene##BC043599|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene##BC090925|CIDECP|152302|cell death-inducing DFFA-like effector c pseudogene##AK022260|LOC401052|401052|uncharacterized LOC401052##NM_001008737|LOC401052|401052|uncharacterized LOC401052##AK092352|LOC442075|442075|uncharacterized LOC442075##AK307512|FANCD2|2177|Fanconi anemia, complementation group D2##NM_001018115|FANCD2|2177|Fanconi anemia, complementation group D2##NM_033084|FANCD2|2177|Fanconi anemia, complementation group D2##AF230336|FANCD2|2177|Fanconi anemia, complementation group D2##AF340183|FANCD2|2177|Fanconi anemia, complementation group D2##BC013582|FANCD2|2177|Fanconi anemia, complementation group D2##BC038666|FANCD2|2177|Fanconi anemia, complementation group D2	0.013401	
chr7	148893901	148893986	reg1042295.p2	3.394	+	D30612 TSC_hg19_v1_chr7_+_148892683 NM_003575 AK299280 BC073805 AK316282 AB587508 BC055287 BC041704	-1254	+	TSC_hg19_v1_chr7_+_148844772 AY049744 AB527270 CU692152	-49184	+	TSC_hg19_v1_chr7_+_148844532 AK026380 NM_170686 BC043295 AK290499	-49414	+	TSC_hg19_v1_chr7_+_148936741 AK074821 NM_012256 BC022785 EU446738 CU692712	42851	+	TSC_hg19_v1_chr7_+_148959286 AK131504 NM_001195220 BC131569 AB528912	65377	+	AK098351 AK310453 AK310396 TSC_hg19_v1_chr7_+_148982401 AK303492	88443	+	D30612|ZNF282|8427|zinc finger protein 282##NM_003575|ZNF282|8427|zinc finger protein 282##AK299280|ZNF282|8427|zinc finger protein 282##BC073805|ZNF282|8427|zinc finger protein 282##AK316282|ZNF282|8427|zinc finger protein 282##BC055287|ZNF282|8427|zinc finger protein 282##BC041704|ZNF282|8427|zinc finger protein 282##AY049744|ZNF398|57541|zinc finger protein 398##AK026380|ZNF398|57541|zinc finger protein 398##NM_170686|ZNF398|57541|zinc finger protein 398##BC043295|ZNF398|57541|zinc finger protein 398##AK290499|ZNF398|57541|zinc finger protein 398##AK074821|ZNF212|7988|zinc finger protein 212##NM_012256|ZNF212|7988|zinc finger protein 212##BC022785|ZNF212|7988|zinc finger protein 212##EU446738|ZNF212|7988|zinc finger protein 212##NM_001195220|ZNF783|100289678|zinc finger family member 783##AK098351|LOC155060|155060|AI894139 pseudogene##AK310453|LOC155060|155060|AI894139 pseudogene##AK310396|LOC155060|155060|AI894139 pseudogene##AK303492|LOC155060|155060|AI894139 pseudogene	0.0	
chr8	25991389	25991490	reg1038559.p1	3.394	+	BC137106 BC137107 NM_022659 TSC_hg19_v1_chr8_-_25902675 AK001144	-88773	-	TSC_hg19_v1_chr8_+_25316748 AK299278 AL833627 BC015691 BC104450 BC104451	-674605	+	AK292505 TSC_hg19_v1_chr8_+_25316724	-674717	+	TSC_hg19_v1_chr8_+_26149035 NM_002717	157582	+	AK314823 TSC_hg19_v1_chr8_+_26149043 BC041071	157610	+	TSC_hg19_v1_chr8_+_26149092 M64929 AY189686	157755	+	BC137106|EBF2|64641|early B-cell factor 2##BC137107|EBF2|64641|early B-cell factor 2##NM_022659|EBF2|64641|early B-cell factor 2##AK001144|EBF2|64641|early B-cell factor 2##AK299278|CDCA2|157313|cell division cycle associated 2##AL833627|CDCA2|157313|cell division cycle associated 2##BC015691|CDCA2|157313|cell division cycle associated 2##BC104450|CDCA2|157313|cell division cycle associated 2##BC104451|CDCA2|157313|cell division cycle associated 2##AK292505|CDCA2|157313|cell division cycle associated 2##NM_002717|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AK314823|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##BC041071|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##M64929|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha##AY189686|PPP2R2A|5520|protein phosphatase 2, regulatory subunit B, alpha	0.0	
chr8	81986954	81987081	reg1035364.p1	3.394	+	AK131274 NM_001033723	-200002	-	TSC_hg19_v1_chr8_+_81398464 AJ319673 NM_001105539 NM_023929 BC127097 BC127098 BC148254	-588533	+	TSC_hg19_v1_chr8_-_81083773 BT019444 CR542034 CR542064 CU676182 DQ891032 DQ894211 AK313135 AK295468 BC018117 U18914 S82081 AK223631 NM_001025253 NM_005079	-903247	-	TSC_hg19_v1_chr8_-_82024304 AK289818 NM_018440	37297	-	NM_001444 TSC_hg19_v1_chr8_+_82192768 AK226036 AK311856 BC070303 BC019385 M94856 DQ891285 DQ894470 BT007449	205756	+	AB528466 CR541649 CR541738 DQ891506 DQ891507 DQ894697 X62167 AK307118 AK311758 BC034997 NM_002677	372652	-	AK131274|ZNF704|619279|zinc finger protein 704##NM_001033723|ZNF704|619279|zinc finger protein 704##AJ319673|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_001105539|ZBTB10|65986|zinc finger and BTB domain containing 10##NM_023929|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127097|ZBTB10|65986|zinc finger and BTB domain containing 10##BC127098|ZBTB10|65986|zinc finger and BTB domain containing 10##BC148254|ZBTB10|65986|zinc finger and BTB domain containing 10##BT019444|TPD52|7163|tumor protein D52##CR542034|TPD52|7163|tumor protein D52##CR542064|TPD52|7163|tumor protein D52##DQ891032|TPD52|7163|tumor protein D52##DQ894211|TPD52|7163|tumor protein D52##AK313135|TPD52|7163|tumor protein D52##AK295468|TPD52|7163|tumor protein D52##BC018117|TPD52|7163|tumor protein D52##U18914|TPD52|7163|tumor protein D52##S82081|TPD52|7163|tumor protein D52##AK223631|TPD52|7163|tumor protein D52##NM_001025253|TPD52|7163|tumor protein D52##NM_005079|TPD52|7163|tumor protein D52##AK289818|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_018440|PAG1|55824|phosphoprotein associated with glycosphingolipid microdomains 1##NM_001444|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK226036|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##AK311856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC070303|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BC019385|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##M94856|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ891285|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##DQ894470|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##BT007449|FABP5|2171|fatty acid binding protein 5 (psoriasis-associated)##CR541649|PMP2|5375|peripheral myelin protein 2##CR541738|PMP2|5375|peripheral myelin protein 2##DQ891506|PMP2|5375|peripheral myelin protein 2##DQ891507|PMP2|5375|peripheral myelin protein 2##DQ894697|PMP2|5375|peripheral myelin protein 2##X62167|PMP2|5375|peripheral myelin protein 2##AK307118|PMP2|5375|peripheral myelin protein 2##AK311758|PMP2|5375|peripheral myelin protein 2##BC034997|PMP2|5375|peripheral myelin protein 2##NM_002677|PMP2|5375|peripheral myelin protein 2	0.0	
chr9	116795798	116795878	reg1036311.p1	3.394	+	TSC_hg19_v1_chr9_+_116638585 BC036039 NM_133374 BC136287 BC143826 AK126896 BC053892	-157239	+	TSC_hg19_v1_chr9_+_116356408 BC018072 BC019039 CU676160	-439357	+	AF490838 NM_144489 AK054584	-439628	+	TSC_hg19_v1_chr9_-_116840540 CU692002 AB463406 X04494	44662	-	TSC_hg19_v1_chr9_-_116840546 AY544123	44709	-	TSC_hg19_v1_chr9_-_116840581 X04225 AK290837	44731	-	BC036039|ZNF618|114991|zinc finger protein 618##NM_133374|ZNF618|114991|zinc finger protein 618##BC136287|ZNF618|114991|zinc finger protein 618##BC143826|ZNF618|114991|zinc finger protein 618##AK126896|ZNF618|114991|zinc finger protein 618##BC053892|ZNF618|114991|zinc finger protein 618##BC018072|RGS3|5998|regulator of G-protein signaling 3##BC019039|RGS3|5998|regulator of G-protein signaling 3##AF490838|RGS3|5998|regulator of G-protein signaling 3##NM_144489|RGS3|5998|regulator of G-protein signaling 3##AK054584|RGS3|5998|regulator of G-protein signaling 3##X04494|AMBP|259|alpha-1-microglobulin/bikunin precursor##AY544123|AMBP|259|alpha-1-microglobulin/bikunin precursor##X04225|AMBP|259|alpha-1-microglobulin/bikunin precursor##AK290837|AMBP|259|alpha-1-microglobulin/bikunin precursor	0.0	
chrX	122337745	122337895	reg1039468.p2	3.394	+	NM_000828 NM_007325 BC032004 TSC_hg19_v1_chrX_+_122318203 BC117464 U10301 U10302 AB384892 HQ258659	-19580	+	TSC_hg19_v1_chrX_+_120181464 BC050732 NM_012084 AK313356	-2156380	+	BC029540 NM_001080141 NM_001080146	-2218183	-	TSC_hg19_v1_chrX_-_122866885 AK001758	529063	-	TSC_hg19_v1_chrX_-_122866897 NM_001081550	529077	-	TSC_hg19_v1_chrX_+_122993844 AK313883 NM_001204401 NM_001167 AK309704 U32974 BC032729	656122	+	NM_000828|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##NM_007325|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC032004|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC117464|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10301|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##U10302|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##HQ258659|GRIA3|2892|glutamate receptor, ionotrophic, AMPA 3##BC050732|GLUD2|2747|glutamate dehydrogenase 2##NM_012084|GLUD2|2747|glutamate dehydrogenase 2##AK313356|GLUD2|2747|glutamate dehydrogenase 2##BC029540|CT47A11|255313|cancer/testis antigen family 47, member A11##NM_001080141|CT47A6|728062|cancer/testis antigen family 47, member A6##NM_001080146|CT47A1|728096|cancer/testis antigen family 47, member A1##AK001758|THOC2|57187|THO complex 2##NM_001081550|THOC2|57187|THO complex 2##AK313883|XIAP|331|X-linked inhibitor of apoptosis##NM_001204401|XIAP|331|X-linked inhibitor of apoptosis##NM_001167|XIAP|331|X-linked inhibitor of apoptosis##AK309704|XIAP|331|X-linked inhibitor of apoptosis##U32974|XIAP|331|X-linked inhibitor of apoptosis##BC032729|XIAP|331|X-linked inhibitor of apoptosis	0.019646	
chrX	46545477	46545559	reg1014237.p1	3.394	+	NM_019886 BC045537 BC023971 AB040711 AB037187 GQ129386 GQ129387	-112240	+	BC034616 TSC_hg19_v1_chrX_+_46404957 AK056314	-140574	+	AK295054 AK308986 AY971607 NM_001039891 NM_001146291 NM_001190417	-140662	-	AF298591 NM_032591 TSC_hg19_v1_chrX_-_46618577	73011	-	TSC_hg19_v1_chrX_-_46618608 BC094742	73112	-	NM_006915 AJ007590 TSC_hg19_v1_chrX_+_46696391 BC027851	150859	+	NM_019886|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC045537|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC023971|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB040711|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##AB037187|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129386|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##GQ129387|CHST7|56548|carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7##BC034616|LOC401588|401588|uncharacterized LOC401588##AK056314|LOC401588|401588|uncharacterized LOC401588##AK295054|ZNF674|641339|zinc finger protein 674##AK308986|ZNF674|641339|zinc finger protein 674##AY971607|ZNF674|641339|zinc finger protein 674##NM_001039891|ZNF674|641339|zinc finger protein 674##NM_001146291|ZNF674|641339|zinc finger protein 674##NM_001190417|ZNF674|641339|zinc finger protein 674##AF298591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_032591|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##BC094742|SLC9A7|84679|solute carrier family 9 (sodium/hydrogen exchanger), member 7##NM_006915|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##AJ007590|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)##BC027851|RP2|6102|retinitis pigmentosa 2 (X-linked recessive)	0.0	
chr10	135229018	135229084	reg1037837.p1	3.393	+	TSC_hg19_v1_chr10_+_135207660 NM_138384 BC026039 AK308997 BC004409 AK074976 AK293988 BC035721 EU831415 EU831508 BC026725 AK292515 AK125012	-21319	+	AF312698 BC032778 NM_152911 NM_207127 NM_207128 TSC_hg19_v1_chr10_+_135192774 AY541516 AY541513 AY541514 AY541515 AY541517 AY541518 AY541519 AY541520 AY541521 AY541523 AY541524 AY358418 DQ891313 DQ893351 DQ894497 DQ896670	-36294	+	BT007123 BC013264 TSC_hg19_v1_chr10_-_135186855 BC008906 D13900 NM_004092	-42165	-	BC040198 TSC_hg19_v1_chr10_-_135238130 NM_001012508	9051	-	TSC_hg19_v1_chr10_+_135340866 AK290822 NM_000773 J02625 AF182276 DQ149222 BC067435 BC067433 CU688292 AF084225 AJ853939 AJ853940 AJ877238	111881	+	AK309935 AK314978 BC034821 NM_001143763 NM_001143764	150058	-	NM_138384|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026039|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK308997|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC004409|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK074976|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK293988|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC035721|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831415|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##EU831508|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##BC026725|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK292515|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AK125012|MTG1|92170|mitochondrial GTPase 1 homolog (S. cerevisiae)##AF312698|PAOX|196743|polyamine oxidase (exo-N4-amino)##BC032778|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_152911|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207127|PAOX|196743|polyamine oxidase (exo-N4-amino)##NM_207128|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541516|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541513|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541514|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541515|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541517|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541518|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541519|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541520|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541521|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541523|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY541524|PAOX|196743|polyamine oxidase (exo-N4-amino)##AY358418|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ891313|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ893351|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ894497|PAOX|196743|polyamine oxidase (exo-N4-amino)##DQ896670|PAOX|196743|polyamine oxidase (exo-N4-amino)##BT007123|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##BC013264|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##BC008906|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##D13900|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##NM_004092|ECHS1|1892|enoyl CoA hydratase, short chain, 1, mitochondrial##BC040198|SPRN|503542|shadow of prion protein homolog (zebrafish)##NM_001012508|SPRN|503542|shadow of prion protein homolog (zebrafish)##AK290822|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##NM_000773|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##J02625|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF182276|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##DQ149222|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067435|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##BC067433|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AF084225|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853939|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ853940|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AJ877238|CYP2E1|1571|cytochrome P450, family 2, subfamily E, polypeptide 1##AK309935|SYCE1|93426|synaptonemal complex central element protein 1##AK314978|SYCE1|93426|synaptonemal complex central element protein 1##BC034821|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143763|SYCE1|93426|synaptonemal complex central element protein 1##NM_001143764|SYCE1|93426|synaptonemal complex central element protein 1	0.0	
chr10	5915758	5915855	reg1003496.p2	3.393	+	TSC_hg19_v1_chr10_-_5855394 Y13286 AK297177 AK297554 AK312485 NM_001115156 NM_001494	-60371	-	BX648038 AB451295 AB451429 BT006868 CR457073 D13988 DQ890573 DQ893733 BC005145 TSC_hg19_v1_chr10_-_5855330 AK309360	-60540	-	TSC_hg19_v1_chr10_+_5772610 AB095927	-143134	+	TSC_hg19_v1_chr10_-_5931834 BC067892 NM_001009941 NM_001009943 NM_019046	16050	-	TSC_hg19_v1_chr10_+_5932205 AK095343	16393	+	TSC_hg19_v1_chr10_+_5932214 NM_178150	16405	+	Y13286|GDI2|2665|GDP dissociation inhibitor 2##AK297177|GDI2|2665|GDP dissociation inhibitor 2##AK297554|GDI2|2665|GDP dissociation inhibitor 2##AK312485|GDI2|2665|GDP dissociation inhibitor 2##NM_001115156|GDI2|2665|GDP dissociation inhibitor 2##NM_001494|GDI2|2665|GDP dissociation inhibitor 2##BX648038|GDI2|2665|GDP dissociation inhibitor 2##AB451295|GDI2|2665|GDP dissociation inhibitor 2##AB451429|GDI2|2665|GDP dissociation inhibitor 2##BT006868|GDI2|2665|GDP dissociation inhibitor 2##CR457073|GDI2|2665|GDP dissociation inhibitor 2##D13988|GDI2|2665|GDP dissociation inhibitor 2##DQ890573|GDI2|2665|GDP dissociation inhibitor 2##DQ893733|GDI2|2665|GDP dissociation inhibitor 2##BC005145|GDI2|2665|GDP dissociation inhibitor 2##AK309360|GDI2|2665|GDP dissociation inhibitor 2##AB095927|FAM208B|54906|family with sequence similarity 208, member B##BC067892|ANKRD16|54522|ankyrin repeat domain 16##NM_001009941|ANKRD16|54522|ankyrin repeat domain 16##NM_001009943|ANKRD16|54522|ankyrin repeat domain 16##NM_019046|ANKRD16|54522|ankyrin repeat domain 16##AK095343|FBXO18|84893|F-box protein, helicase, 18##NM_178150|FBXO18|84893|F-box protein, helicase, 18	0.0	
chr1	1187905	1187995	reg1034046.p2	3.393	+	BC089443 NM_001014980	-5849	-	TSC_hg19_v1_chr1_+_1167622 NM_080605 BC051719	-20273	+	TSC_hg19_v1_chr1_-_1167426 NM_016176 NM_016547	-20517	-	BC104890 BC113430 BC143657 TSC_hg19_v1_chr1_-_1209214 AF296658 AK075017 AK291935	21187	-	TSC_hg19_v1_chr1_-_1209229 BC094777 NM_058167 NM_194315 NM_194457 NM_194458	21280	-	TSC_hg19_v1_chr1_+_1209415 DQ898177	21450	+	BC089443|FAM132A|388581|family with sequence similarity 132, member A##NM_001014980|FAM132A|388581|family with sequence similarity 132, member A##NM_080605|B3GALT6|126792|UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6##BC051719|B3GALT6|126792|UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6##NM_016176|SDF4|51150|stromal cell derived factor 4##NM_016547|SDF4|51150|stromal cell derived factor 4##BC104890|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##BC113430|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##BC143657|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##AF296658|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##AK075017|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##AK291935|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##BC094777|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_058167|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194315|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194457|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2##NM_194458|UBE2J2|118424|ubiquitin-conjugating enzyme E2, J2	0.227161	CTCF.p2:5:0.227
chr1	204482228	204482346	reg1033393.p1	3.393	+	TSC_hg19_v1_chr1_-_204463934 BC094741	-18522	-	BC132876 BC136645 BC144342 NM_002646 AK308153	-22789	-	TSC_hg19_v1_chr1_-_204380946 BC065280 AK222877 NM_032833 AK027650 AK303535 AK316092	-101347	-	TSC_hg19_v1_chr1_+_204485540 NM_001204171 NM_001204172 NM_002393 BC025993 CR749470 BC067299 AK303626 AK304698 AK310903 BX640923 AK223228	3215	+	AF007111 TSC_hg19_v1_chr1_+_204485599 BC105106 BC143431 BC143432 AY923176	3323	+	AF030435 NM_006338 AK226055 TSC_hg19_v1_chr1_-_204654568 AK312408 BC034047 BC068541 NM_201630	172304	-	BC094741|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC132876|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC136645|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC144342|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##NM_002646|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##AK308153|PIK3C2B|5287|phosphoinositide-3-kinase, class 2, beta polypeptide##BC065280|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK222877|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_032833|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK027650|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##AK303535|PPP1R15B|84919|protein phosphatase 1, regulatory subunit 15B##NM_001204171|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_001204172|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##NM_002393|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC025993|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##CR749470|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC067299|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK303626|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK304698|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK310903|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BX640923|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AK223228|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AF007111|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC105106|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143431|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##BC143432|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AY923176|MDM4|4194|Mdm4 p53 binding protein homolog (mouse)##AF030435|LRRN2|10446|leucine rich repeat neuronal 2##NM_006338|LRRN2|10446|leucine rich repeat neuronal 2##AK226055|LRRN2|10446|leucine rich repeat neuronal 2##AK312408|LRRN2|10446|leucine rich repeat neuronal 2##BC034047|LRRN2|10446|leucine rich repeat neuronal 2##BC068541|LRRN2|10446|leucine rich repeat neuronal 2##NM_201630|LRRN2|10446|leucine rich repeat neuronal 2	0.0	
chr12	112741055	112741162	reg1042220.p2	3.393	+	TSC_hg19_v1_chr12_-_112630525 AF174498	-110580	-	TSC_hg19_v1_chr12_+_112563363 AK122620 AK291331 AK295474 AB007447	-177717	+	TSC_hg19_v1_chr12_+_112563341 AK309916 AK312601 NM_001143906 NM_006700	-177786	+	TSC_hg19_v1_chr12_-_112819755 NM_001109662	78717	-	TSC_hg19_v1_chr12_-_112847411 BC022444 X69391 BC004138 BC104824 BC104826 AK308680 NM_000970 NM_001024662	106297	-	NM_002834 TSC_hg19_v1_chr12_+_112856698	115508	+	AF174498|C12orf51|283450|chromosome 12 open reading frame 51##AK122620|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK291331|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK295474|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AB007447|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK309916|TRAFD1|10906|TRAF-type zinc finger domain containing 1##AK312601|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_001143906|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_006700|TRAFD1|10906|TRAF-type zinc finger domain containing 1##NM_001109662|C12orf51|283450|chromosome 12 open reading frame 51##BC022444|RPL6|6128|ribosomal protein L6##X69391|RPL6|6128|ribosomal protein L6##BC004138|RPL6|6128|ribosomal protein L6##BC104824|RPL6|6128|ribosomal protein L6##BC104826|RPL6|6128|ribosomal protein L6##NM_000970|RPL6|6128|ribosomal protein L6##NM_001024662|RPL6|6128|ribosomal protein L6##NM_002834|PTPN11|5781|protein tyrosine phosphatase, non-receptor type 11	0.0	
chr14	60349841	60349939	reg1033546.p1	3.393	+	AB587373 TSC_hg19_v1_chr14_-_60337495 BC111694 L10333 BC090862 BC068510 NM_021136	-12437	-	AK290534 NM_206852 TSC_hg19_v1_chr14_-_60097533	-252357	-	TSC_hg19_v1_chr14_-_60097342 BC000314 BC003003 AK297492	-252546	-	NM_022495 TSC_hg19_v1_chr14_+_60558640 AK095489	208937	+	AY359031 TSC_hg19_v1_chr14_-_60632031 BC000637	282142	-	TSC_hg19_v1_chr14_-_60632103 BC007337 AF151844 AK313285 AL117420 NM_016029	282244	-	BC111694|RTN1|6252|reticulon 1##L10333|RTN1|6252|reticulon 1##BC090862|RTN1|6252|reticulon 1##BC068510|RTN1|6252|reticulon 1##NM_021136|RTN1|6252|reticulon 1##AK290534|RTN1|6252|reticulon 1##NM_206852|RTN1|6252|reticulon 1##BC000314|RTN1|6252|reticulon 1##BC003003|RTN1|6252|reticulon 1##AK297492|RTN1|6252|reticulon 1##NM_022495|C14orf135|64430|chromosome 14 open reading frame 135##AK095489|C14orf135|64430|chromosome 14 open reading frame 135##AY359031|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC000637|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##BC007337|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AF151844|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AK313285|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##AL117420|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7##NM_016029|DHRS7|51635|dehydrogenase/reductase (SDR family) member 7	0.883103	CTCF.p2:6:0.883
chr15	65677941	65678030	reg1002399.p2	3.393	+	BC042054 TSC_hg19_v1_chr15_-_65670341 BC067107 NM_004884	-7634	-	BC006389 NM_017851 TSC_hg19_v1_chr15_-_65579223 AK000516	-98825	-	BC035776 AF035408 AY358904 AK225652 AK225926 AK313352 TSC_hg19_v1_chr15_-_65503811 NM_003613	-174173	-	TSC_hg19_v1_chr15_-_65715258 AB529157	37260	-	TSC_hg19_v1_chr15_-_65715412 AB052622 NM_020962	37416	-	AY354202 BC040203 NM_197960 AK302638	131622	-	BC042054|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC067107|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##NM_004884|IGDCC3|9543|immunoglobulin superfamily, DCC subclass, member 3##BC006389|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##NM_017851|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##AK000516|PARP16|54956|poly (ADP-ribose) polymerase family, member 16##BC035776|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AF035408|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AY358904|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225652|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK225926|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AK313352|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##NM_003613|CILP|8483|cartilage intermediate layer protein, nucleotide pyrophosphohydrolase##AB052622|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##NM_020962|IGDCC4|57722|immunoglobulin superfamily, DCC subclass, member 4##AY354202|DPP8|54878|dipeptidyl-peptidase 8##BC040203|DPP8|54878|dipeptidyl-peptidase 8##NM_197960|DPP8|54878|dipeptidyl-peptidase 8##AK302638|DPP8|54878|dipeptidyl-peptidase 8	0.0	
chr16	23334800	23334888	reg1036658.p1	3.393	+	NM_000336 BC036352 X87159 AK313192	-21217	+	U48936 BC059391 NM_001039 TSC_hg19_v1_chr16_+_23194066	-140792	+	AK126752 TSC_hg19_v1_chr16_-_23160566 AJ586135 NM_020718	-174295	-	TSC_hg19_v1_chr16_-_23464487 BC000549 BC037563 NM_153603	129651	-	TSC_hg19_v1_chr16_-_23521748 AB384559 CU674130 DQ892534 DQ895745 BC050620 AF165531	186891	-	AF190863 AF323754 AF233522 TSC_hg19_v1_chr16_-_23521769	186918	-	NM_000336|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##BC036352|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##X87159|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##AK313192|SCNN1B|6338|sodium channel, nonvoltage-gated 1, beta##U48936|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##BC059391|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##NM_001039|SCNN1G|6340|sodium channel, nonvoltage-gated 1, gamma##AK126752|USP31|57478|ubiquitin specific peptidase 31##AJ586135|USP31|57478|ubiquitin specific peptidase 31##NM_020718|USP31|57478|ubiquitin specific peptidase 31##BC000549|COG7|91949|component of oligomeric golgi complex 7##BC037563|COG7|91949|component of oligomeric golgi complex 7##NM_153603|COG7|91949|component of oligomeric golgi complex 7##DQ892534|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##DQ895745|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##BC050620|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF165531|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF190863|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF323754|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2##AF233522|GGA2|23062|golgi-associated, gamma adaptin ear containing, ARF binding protein 2	0.0	
chr1	85425185	85425309	reg1034026.p2	3.393	+	TSC_hg19_v1_chr1_-_85358890 AK308283 NM_012152	-66361	-	AY367055 TSC_hg19_v1_chr1_-_85156128 AK316472 AK307336 BC064389 BC033637 AK294057 AK292475 NM_001166295 NM_001166417 AL133046 AB023140 NM_001166293 NM_001166294 NM_014021	-269171	-	TSC_hg19_v1_chr1_-_85040102 CU692842 M95767 AK075423 BC065191 AK298703 AK314640 BC126333 BC126335 BC024007 BC096752 NM_004388	-385141	-	BC104891 BC104893 TSC_hg19_v1_chr1_-_85462793 AK094010 AK309858 AX748410 NM_153259	37461	-	AF475085 AK001868 BC060765 TSC_hg19_v1_chr1_-_85514153 AK292206	88898	-	TSC_hg19_v1_chr1_-_85514184 BX647497 AK314354 NM_001253693 NM_018298	88951	-	AK308283|LPAR3|23566|lysophosphatidic acid receptor 3##NM_012152|LPAR3|23566|lysophosphatidic acid receptor 3##AY367055|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK316472|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK307336|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC064389|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##BC033637|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK294057|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AK292475|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166295|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166417|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AL133046|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##AB023140|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166293|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_001166294|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##NM_014021|SSX2IP|117178|synovial sarcoma, X breakpoint 2 interacting protein##M95767|CTBS|1486|chitobiase, di-N-acetyl-##AK075423|CTBS|1486|chitobiase, di-N-acetyl-##BC065191|CTBS|1486|chitobiase, di-N-acetyl-##AK298703|CTBS|1486|chitobiase, di-N-acetyl-##AK314640|CTBS|1486|chitobiase, di-N-acetyl-##BC126333|CTBS|1486|chitobiase, di-N-acetyl-##BC126335|CTBS|1486|chitobiase, di-N-acetyl-##BC024007|CTBS|1486|chitobiase, di-N-acetyl-##BC096752|CTBS|1486|chitobiase, di-N-acetyl-##NM_004388|CTBS|1486|chitobiase, di-N-acetyl-##BC104891|MCOLN2|255231|mucolipin 2##BC104893|MCOLN2|255231|mucolipin 2##AK094010|MCOLN2|255231|mucolipin 2##AK309858|MCOLN2|255231|mucolipin 2##NM_153259|MCOLN2|255231|mucolipin 2##AF475085|MCOLN3|55283|mucolipin 3##AK001868|MCOLN3|55283|mucolipin 3##BC060765|MCOLN3|55283|mucolipin 3##AK292206|MCOLN3|55283|mucolipin 3##BX647497|MCOLN3|55283|mucolipin 3##AK314354|MCOLN3|55283|mucolipin 3##NM_001253693|MCOLN3|55283|mucolipin 3##NM_018298|MCOLN3|55283|mucolipin 3	0.0	
chr19	14247534	14247714	reg1018591.p1	3.393	+	AK302134 TSC_hg19_v1_chr19_-_14247402 BC036521 AK001466 NM_018154	-202	-	AB104486 AB463417 CR457235 GQ129346 GQ129347 AF279307 BC007726 BC010014 BC002518 TSC_hg19_v1_chr19_-_14247395 AK223080 AK001288	-292	-	TSC_hg19_v1_chr19_-_14228563 AK290147	-19055	-	TSC_hg19_v1_chr19_+_14247979 BX537706	367	+	BC013275 BC072445 AK022001 TSC_hg19_v1_chr19_-_14260830 BC090949	13176	-	AF307079 AB020628 NM_001008701 NM_014921 TSC_hg19_v1_chr19_-_14317074	69424	-	AK302134|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC036521|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK001466|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##NM_018154|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AB104486|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##CR457235|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##GQ129346|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##GQ129347|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AF279307|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC007726|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##BC010014|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK223080|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK001288|ASF1B|55723|ASF1 anti-silencing function 1 homolog B (S. cerevisiae)##AK290147|PRKACA|5566|protein kinase, cAMP-dependent, catalytic, alpha##BX537706|LOC100507373|100507373|uncharacterized LOC100507373##BC013275|LPHN1|22859|latrophilin 1##BC072445|LPHN1|22859|latrophilin 1##AK022001|LPHN1|22859|latrophilin 1##BC090949|LPHN1|22859|latrophilin 1##AF307079|LPHN1|22859|latrophilin 1##AB020628|LPHN1|22859|latrophilin 1##NM_001008701|LPHN1|22859|latrophilin 1##NM_014921|LPHN1|22859|latrophilin 1	0.020412	
chr2	166273676	166273762	reg1036673.p1	3.393	+	NM_001040143	-121437	+	NM_021007	-123379	+	AK289656 NM_001040142 DQ993531 BC029489 BC047398 BC048417	-177787	+	AK126129 NM_001172173 TSC_hg19_v1_chr2_+_166326207	52465	+	NM_024969 AK056655 TSC_hg19_v1_chr2_+_166428851	155130	+	AK313389 TSC_hg19_v1_chr2_-_166650651	376886	-	NM_001040143|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_021007|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##AK289656|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##NM_001040142|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##DQ993531|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC029489|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC047398|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##BC048417|SCN2A|6326|sodium channel, voltage-gated, type II, alpha subunit##AK126129|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##NM_001172173|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##NM_024969|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##AK056655|CSRNP3|80034|cysteine-serine-rich nuclear protein 3##AK313389|GALNT3|2591|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)	0.807485	CTCF.p2:-29:0.807
chr22	26531013	26531132	reg1041240.p1	3.393	+	TSC_hg19_v1_chr22_+_26138168 AY077700	-392888	+	AB075376 TSC_hg19_v1_chr22_+_26138129 AJ310931 NM_032608	-392952	+	TSC_hg19_v1_chr22_+_25960925 BC021221 AK292234 AK310398 AK058103 CU691422 X69117	-570126	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	34365	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	34425	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	34591	+	AY077700|MYO18B|84700|myosin XVIIIB##AB075376|MYO18B|84700|myosin XVIIIB##AJ310931|MYO18B|84700|myosin XVIIIB##NM_032608|MYO18B|84700|myosin XVIIIB##BC021221|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK292234|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK310398|ADRBK2|157|adrenergic, beta, receptor kinase 2##AK058103|ADRBK2|157|adrenergic, beta, receptor kinase 2##X69117|ADRBK2|157|adrenergic, beta, receptor kinase 2##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like	0.958474	CTCF.p2:7:0.958
chr2	231306386	231306567	reg1040308.p2	3.393	+	AK091898 NM_001206704	-25006	+	AK293373 TSC_hg19_v1_chr2_+_231280934 AF056322 AF255565 M60618 U36501	-25520	+	TSC_hg19_v1_chr2_+_231280915 AK304205 BC011562	-25557	+	TSC_hg19_v1_chr2_+_231577556 NM_016289	271070	+	TSC_hg19_v1_chr2_+_231577633 BC020570	271168	+	AK292382 NM_001130849 NM_001130850 AK315692	271802	+	AK091898|SP100|6672|SP100 nuclear antigen##NM_001206704|SP100|6672|SP100 nuclear antigen##AK293373|SP100|6672|SP100 nuclear antigen##AF056322|SP100|6672|SP100 nuclear antigen##AF255565|SP100|6672|SP100 nuclear antigen##M60618|SP100|6672|SP100 nuclear antigen##U36501|SP100|6672|SP100 nuclear antigen##AK304205|SP100|6672|SP100 nuclear antigen##BC011562|SP100|6672|SP100 nuclear antigen##NM_016289|CAB39|51719|calcium binding protein 39##BC020570|CAB39|51719|calcium binding protein 39##AK292382|CAB39|51719|calcium binding protein 39##NM_001130849|CAB39|51719|calcium binding protein 39##NM_001130850|CAB39|51719|calcium binding protein 39##AK315692|CAB39|51719|calcium binding protein 39	0.305804	CTCF.p2:-98:0.306
chr22	38004332	38004399	reg1041067.p1	3.393	+	M87842 BC059782 NM_006498 CR456512	-28365	-	TSC_hg19_v1_chr22_+_37956486 NM_152243 BC009356 AK292190 M88338	-47892	+	AB590902 AY032928 NM_014550 BC113659 BC117403 AY028896 TSC_hg19_v1_chr22_-_37915379 BC051720	-89058	-	TSC_hg19_v1_chr22_+_38004480 NM_001001560 NM_001001561 NM_001172687 NM_013365 AK075256	197	+	TSC_hg19_v1_chr22_+_38004843 CR456493 BC010917 AK290548 BC029388 AK225157 BC044629 AF190862 AF233521 AF218584	405	+	TSC_hg19_v1_chr22_+_38004869 AB463055 CU013090 CU013378 CU692224	518	+	M87842|LGALS2|3957|lectin, galactoside-binding, soluble, 2##BC059782|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_006498|LGALS2|3957|lectin, galactoside-binding, soluble, 2##CR456512|LGALS2|3957|lectin, galactoside-binding, soluble, 2##NM_152243|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##BC009356|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AK292190|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##M88338|CDC42EP1|11135|CDC42 effector protein (Rho GTPase binding) 1##AY032928|CARD10|29775|caspase recruitment domain family, member 10##NM_014550|CARD10|29775|caspase recruitment domain family, member 10##BC113659|CARD10|29775|caspase recruitment domain family, member 10##BC117403|CARD10|29775|caspase recruitment domain family, member 10##AY028896|CARD10|29775|caspase recruitment domain family, member 10##NM_001001560|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001001561|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_001172687|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##NM_013365|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK075256|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CR456493|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC010917|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK290548|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC029388|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AK225157|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##BC044629|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF190862|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF233521|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##AF218584|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CU013090|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1##CU013378|GGA1|26088|golgi-associated, gamma adaptin ear containing, ARF binding protein 1	0.0	
chr3	10825179	10825293	reg1041205.p1	3.393	+	L20977 TSC_hg19_v1_chr3_-_10749723	-75514	-	AB210008 TSC_hg19_v1_chr3_-_10547352	-277890	-	AK308898 NM_001001331 NM_001683 TSC_hg19_v1_chr3_-_10547271	-277967	-	TSC_hg19_v1_chr3_+_10857912 AK312719 BC036083 NM_014229 S75989 AB527355	32671	+	NM_003042 TSC_hg19_v1_chr3_+_11034421	209185	+	TSC_hg19_v1_chr3_+_11034439 BC057291 BC033904	209226	+	L20977|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AB210008|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK308898|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001001331|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##NM_001683|ATP2B2|491|ATPase, Ca++ transporting, plasma membrane 2##AK312719|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##BC036083|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_014229|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##S75989|SLC6A11|6538|solute carrier family 6 (neurotransmitter transporter, GABA), member 11##NM_003042|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC057291|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1##BC033904|SLC6A1|6529|solute carrier family 6 (neurotransmitter transporter, GABA), member 1	0.013646	
chr3	58319223	58319294	reg1023928.p2	3.393	+	TSC_hg19_v1_chr3_+_58318663 BC008943 AB209688 AK131385 AY437879 AK296215 BC014479 AY847220 AY847221 AY847222 AF399753 CU677017 DQ124707 DQ124708	-584	+	TSC_hg19_v1_chr3_+_58318618 AY274811 NM_017771 AK000342 AK295542	-645	+	AK311396 TSC_hg19_v1_chr3_+_58292265 AK311969	-26997	+	M34056 M19123 BC004115 AB528205 AM392999 AM393278 CR541911 CU674222 DQ891366 DQ894546 M34479 M34055 M54788 AB209241 AL117618 AK293153 BC000439 BC001924 TSC_hg19_v1_chr3_-_58419557 AK225569 AK311514 AK313022 J03576 X57778 AK225621 NM_000925 NM_001173468	100224	-	TSC_hg19_v1_chr3_+_58477822 NM_001128214 AK075297	158580	+	AK074934 NM_153331	164833	+	BC008943|PXK|54899|PX domain containing serine/threonine kinase##AB209688|PXK|54899|PX domain containing serine/threonine kinase##AK131385|PXK|54899|PX domain containing serine/threonine kinase##AY437879|PXK|54899|PX domain containing serine/threonine kinase##AK296215|PXK|54899|PX domain containing serine/threonine kinase##BC014479|PXK|54899|PX domain containing serine/threonine kinase##AY847220|PXK|54899|PX domain containing serine/threonine kinase##AY847221|PXK|54899|PX domain containing serine/threonine kinase##AY847222|PXK|54899|PX domain containing serine/threonine kinase##AF399753|PXK|54899|PX domain containing serine/threonine kinase##DQ124707|PXK|54899|PX domain containing serine/threonine kinase##DQ124708|PXK|54899|PX domain containing serine/threonine kinase##AY274811|PXK|54899|PX domain containing serine/threonine kinase##NM_017771|PXK|54899|PX domain containing serine/threonine kinase##AK000342|PXK|54899|PX domain containing serine/threonine kinase##AK295542|PXK|54899|PX domain containing serine/threonine kinase##AK311396|RPP14|11102|ribonuclease P/MRP 14kDa subunit##AK311969|RPP14|11102|ribonuclease P/MRP 14kDa subunit##M34056|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M19123|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC004115|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM392999|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AM393278|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##CR541911|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ891366|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##DQ894546|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34479|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M34055|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##M54788|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AB209241|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AL117618|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK293153|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC000439|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##BC001924|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225569|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK311514|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK313022|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##J03576|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##X57778|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##AK225621|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_000925|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_001173468|PDHB|5162|pyruvate dehydrogenase (lipoamide) beta##NM_001128214|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK075297|KCTD6|200845|potassium channel tetramerisation domain containing 6##AK074934|KCTD6|200845|potassium channel tetramerisation domain containing 6##NM_153331|KCTD6|200845|potassium channel tetramerisation domain containing 6	0.0	
chr4	140135349	140135498	reg1035099.p1	3.393	+	TSC_hg19_v1_chr4_-_140098351 AK311505	-37086	-	U43188 NM_201999	-74820	-	TSC_hg19_v1_chr4_-_140005477 U43189 AK316455 DQ359746 BC065025 BC034951 NM_006874	-129812	-	BC037987 BC104173 BC104174 AF329088 AF484960 NM_032623	65992	-	CR457005 AF047184 TSC_hg19_v1_chr4_-_140216970 AF047435 AK291147 BC101798 BC112061	81550	-	BC107682 NM_001184986 NM_001184991 NM_002494	86949	-	U43188|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_201999|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##U43189|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##AK316455|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##DQ359746|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC065025|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC034951|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##NM_006874|ELF2|1998|E74-like factor 2 (ets domain transcription factor)##BC037987|C4orf49|84709|chromosome 4 open reading frame 49##BC104173|C4orf49|84709|chromosome 4 open reading frame 49##BC104174|C4orf49|84709|chromosome 4 open reading frame 49##AF329088|C4orf49|84709|chromosome 4 open reading frame 49##AF484960|C4orf49|84709|chromosome 4 open reading frame 49##NM_032623|C4orf49|84709|chromosome 4 open reading frame 49##CR457005|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF047184|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AF047435|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##AK291147|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC101798|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC112061|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##BC107682|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184986|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_001184991|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa##NM_002494|NDUFC1|4717|NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa	0.046263	
chr4	84161620	84161735	reg1029335.p1	3.393	+	TSC_hg19_v1_chr4_-_84035912 AK000140 NM_001130715 NM_016619	-125750	-	AF208846 EU570985 EU570986 TSC_hg19_v1_chr4_-_84035890 AJ422147	-125786	-	BC012205 NM_001130716	-130674	-	TSC_hg19_v1_chr4_-_84205924 DQ895928 EU176380 BC008804 AK023076	44238	-	TSC_hg19_v1_chr4_-_84205952 AK129583 AK300972 BC020728 AJ621061 NM_015697	44326	-	AJ627581 TSC_hg19_v1_chr4_-_84255962 AF084467 AM419200 AY948074 CU690802 AF152376 NM_001199830 AF165154 AK075400	94269	-	AK000140|PLAC8|51316|placenta-specific 8##NM_001130715|PLAC8|51316|placenta-specific 8##NM_016619|PLAC8|51316|placenta-specific 8##AF208846|PLAC8|51316|placenta-specific 8##EU570985|PLAC8|51316|placenta-specific 8##EU570986|PLAC8|51316|placenta-specific 8##AJ422147|PLAC8|51316|placenta-specific 8##BC012205|PLAC8|51316|placenta-specific 8##NM_001130716|PLAC8|51316|placenta-specific 8##DQ895928|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##EU176380|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC008804|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK023076|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK129583|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AK300972|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##BC020728|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AJ621061|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##NM_015697|COQ2|27235|coenzyme Q2 homolog, prenyltransferase (yeast)##AF084467|HPSE|10855|heparanase##AM419200|HPSE|10855|heparanase##AY948074|HPSE|10855|heparanase##AF152376|HPSE|10855|heparanase##NM_001199830|HPSE|10855|heparanase##AF165154|HPSE|10855|heparanase##AK075400|HPSE|10855|heparanase	0.0	
chr5	124076783	124076850	reg1038197.p1	3.393	+	NM_001031812 NM_001044722 NM_001044723 NM_004384 TSC_hg19_v1_chr5_+_122847953 AK299739 AK316019	-1228934	+	TSC_hg19_v1_chr5_-_122759046 BC040527 BC144558 AK296999 AK095646 NM_001166226 NM_153223	-1317672	-	NM_001136239 AK297992 AF272898 AF272899	-1651972	+	BC131507 AB033107 BC151226 NM_020747	3972	-	NM_001146319 AK316288 AK300154	1618998	+	TSC_hg19_v1_chr5_+_125758822 NM_001146320 NM_001146321 NM_023927	1682027	+	NM_001031812|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044722|CSNK1G3|1456|casein kinase 1, gamma 3##NM_001044723|CSNK1G3|1456|casein kinase 1, gamma 3##NM_004384|CSNK1G3|1456|casein kinase 1, gamma 3##AK299739|CSNK1G3|1456|casein kinase 1, gamma 3##AK316019|CSNK1G3|1456|casein kinase 1, gamma 3##BC040527|CEP120|153241|centrosomal protein 120kDa##BC144558|CEP120|153241|centrosomal protein 120kDa##AK296999|CEP120|153241|centrosomal protein 120kDa##AK095646|CEP120|153241|centrosomal protein 120kDa##NM_001166226|CEP120|153241|centrosomal protein 120kDa##NM_153223|CEP120|153241|centrosomal protein 120kDa##NM_001136239|PRDM6|93166|PR domain containing 6##AK297992|PRDM6|93166|PR domain containing 6##AF272898|PRDM6|93166|PR domain containing 6##AF272899|PRDM6|93166|PR domain containing 6##BC131507|ZNF608|57507|zinc finger protein 608##AB033107|ZNF608|57507|zinc finger protein 608##BC151226|ZNF608|57507|zinc finger protein 608##NM_020747|ZNF608|57507|zinc finger protein 608##NM_001146319|GRAMD3|65983|GRAM domain containing 3##AK316288|GRAMD3|65983|GRAM domain containing 3##AK300154|GRAMD3|65983|GRAM domain containing 3##NM_001146320|GRAMD3|65983|GRAM domain containing 3##NM_001146321|GRAMD3|65983|GRAM domain containing 3##NM_023927|GRAMD3|65983|GRAM domain containing 3	0.0	
chr5	62421771	62421861	reg1042646.p1	3.393	+	AK123022 NM_181506 BX649157 AY358733 BC110838 AY280614	-547178	+	AK302781 NM_001134779	-707106	+	TSC_hg19_v1_chr5_+_61708589 NM_016338 AK001696 BC033776	-713192	+	AF498978 BC069159 NM_000524 AB464441 BC136263 TSC_hg19_v1_chr5_-_63257719 AK291429 AK311460	835846	-	AK314187 TSC_hg19_v1_chr5_-_63258084	836206	-	TSC_hg19_v1_chr5_+_63461666 AK090756 AX746601 NM_001113561 NM_178532 BC101277 BC101278 BC101279 AL832580 BC101397	1039865	+	AK123022|LRRC70|100130733|leucine rich repeat containing 70##NM_181506|LRRC70|100130733|leucine rich repeat containing 70##AY358733|LRRC70|100130733|leucine rich repeat containing 70##BC110838|LRRC70|100130733|leucine rich repeat containing 70##AY280614|LRRC70|100130733|leucine rich repeat containing 70##AK302781|IPO11|51194|importin 11##NM_001134779|IPO11|51194|importin 11##NM_016338|IPO11|51194|importin 11##AK001696|IPO11|51194|importin 11##BC033776|IPO11|51194|importin 11##AF498978|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC069159|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##NM_000524|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##BC136263|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK291429|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK314187|HTR1A|3350|5-hydroxytryptamine (serotonin) receptor 1A##AK090756|RNF180|285671|ring finger protein 180##NM_001113561|RNF180|285671|ring finger protein 180##NM_178532|RNF180|285671|ring finger protein 180##BC101277|RNF180|285671|ring finger protein 180##BC101278|RNF180|285671|ring finger protein 180##BC101279|RNF180|285671|ring finger protein 180##AL832580|RNF180|285671|ring finger protein 180##BC101397|RNF180|285671|ring finger protein 180	0.372103	CTCF.p2:-5:0.372
chr7	138330213	138330315	reg1043248.p1	3.393	+	AF119042 BC028689 TSC_hg19_v1_chr7_+_138145183 AB528587 AF009353	-185028	+	TSC_hg19_v1_chr7_+_138145003 AK312610 AK075306 NM_003852 NM_015905 AK302679	-185272	+	AK298421 NM_001190906 NM_001190907 NM_005989 Z28339 AK298428 BC130625 BC130627 AK289425 HQ258384	-569046	+	BC036796 NM_174959	18704	-	NM_001139456	33525	-	NM_130841	128517	-	AF119042|TRIM24|8805|tripartite motif containing 24##BC028689|TRIM24|8805|tripartite motif containing 24##AF009353|TRIM24|8805|tripartite motif containing 24##AK312610|TRIM24|8805|tripartite motif containing 24##AK075306|TRIM24|8805|tripartite motif containing 24##NM_003852|TRIM24|8805|tripartite motif containing 24##NM_015905|TRIM24|8805|tripartite motif containing 24##AK302679|TRIM24|8805|tripartite motif containing 24##AK298421|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190906|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190907|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_005989|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##Z28339|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK298428|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130625|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130627|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK289425|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##HQ258384|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC036796|SVOPL|136306|SVOP-like##NM_174959|SVOPL|136306|SVOP-like##NM_001139456|SVOPL|136306|SVOP-like##NM_130841|ATP6V0A4|50617|ATPase, H+ transporting, lysosomal V0 subunit a4	0.028161	
chr9	33925383	33925490	reg1022603.p2	3.393	+	TSC_hg19_v1_chr9_+_33817704 AJ240087 CR457233	-107764	+	TSC_hg19_v1_chr9_+_33817325 BC047584 AK000426 BC004862 AK225880	-108042	+	TSC_hg19_v1_chr9_+_33817170 NM_017811	-108252	+	AB209911 TSC_hg19_v1_chr9_-_34048886 AK302754 AK294952 AK299183 AK303493 CR933678	123441	-	TSC_hg19_v1_chr9_-_34048895 BC111409 AK302335 NM_018449	123480	-	AK000354 AK292935 TSC_hg19_v1_chr9_-_34126623	201150	-	AJ240087|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##CR457233|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC047584|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK000426|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##BC004862|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AK225880|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##NM_017811|UBE2R2|54926|ubiquitin-conjugating enzyme E2R 2##AB209911|UBAP2|55833|ubiquitin associated protein 2##AK302754|UBAP2|55833|ubiquitin associated protein 2##AK294952|UBAP2|55833|ubiquitin associated protein 2##AK299183|UBAP2|55833|ubiquitin associated protein 2##AK303493|UBAP2|55833|ubiquitin associated protein 2##CR933678|UBAP2|55833|ubiquitin associated protein 2##BC111409|UBAP2|55833|ubiquitin associated protein 2##AK302335|UBAP2|55833|ubiquitin associated protein 2##NM_018449|UBAP2|55833|ubiquitin associated protein 2##AK000354|DCAF12|25853|DDB1 and CUL4 associated factor 12##AK292935|DCAF12|25853|DDB1 and CUL4 associated factor 12	0.407544	
chrX	152601333	152601437	reg1037118.p1	3.393	+	TSC_hg19_v1_chrX_+_152599610 AK122976 NM_001080485	-1776	+	AY148486 EU161102 BC017555 AK314979 NM_004988	-115291	-	NM_032882 NM_001242319	-355372	-	NM_001136273	82395	+	NM_080701	110559	-	CU675933 TSC_hg19_v1_chrX_-_152736028 AF267739 AK302066 AK300650 AF319570 AF319571 AF319572 AF319573 AB464338 AM393157 DQ891762 DQ894946 BC008141	134666	-	AK122976|ZNF275|10838|zinc finger protein 275##NM_001080485|ZNF275|10838|zinc finger protein 275##AY148486|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##EU161102|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##BC017555|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##AK314979|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##NM_004988|MAGEA1|4100|melanoma antigen family A, 1 (directs expression of antigen MZ2-E)##NM_032882|PNMA6A|84968|paraneoplastic antigen like 6A##NM_001242319|PNMA6D|100287466|paraneoplastic antigen like 6D##NM_001136273|ZFP92|139735|zinc finger protein 92 homolog (mouse)##NM_080701|TREX2|11219|three prime repair exonuclease 2##AF267739|HAUS7|55559|HAUS augmin-like complex, subunit 7##AK302066|HAUS7|55559|HAUS augmin-like complex, subunit 7##AK300650|HAUS7|55559|HAUS augmin-like complex, subunit 7##AM393157|HAUS7|55559|HAUS augmin-like complex, subunit 7##DQ891762|TREX2|11219|three prime repair exonuclease 2##DQ894946|HAUS7|55559|HAUS augmin-like complex, subunit 7##BC008141|HAUS7|55559|HAUS augmin-like complex, subunit 7	0.0	
chr1	22109012	22109127	reg1033172.p2	3.392	+	AB007943 M64788 TSC_hg19_v1_chr1_-_21995851 NM_001145657 NM_002885	-113236	-	BC054490 TSC_hg19_v1_chr1_-_21978334 NM_001145658	-130722	-	AB003930 TSC_hg19_v1_chr1_-_21949064	-160032	-	CU679968 AB384973 AK315005 BC104896 BC143343 BC143349 BC143354 TSC_hg19_v1_chr1_-_22109586 AK074247 AF502942 BC011576	456	-	TSC_hg19_v1_chr1_-_22109643 BC103724 BC067261	565	-	TSC_hg19_v1_chr1_-_22109701 AK026930 NM_001032730 NM_032236	630	-	AB007943|RAP1GAP|5909|RAP1 GTPase activating protein##M64788|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145657|RAP1GAP|5909|RAP1 GTPase activating protein##NM_002885|RAP1GAP|5909|RAP1 GTPase activating protein##BC054490|RAP1GAP|5909|RAP1 GTPase activating protein##NM_001145658|RAP1GAP|5909|RAP1 GTPase activating protein##AB003930|RAP1GAP|5909|RAP1 GTPase activating protein##AK315005|USP48|84196|ubiquitin specific peptidase 48##BC104896|USP48|84196|ubiquitin specific peptidase 48##BC143343|USP48|84196|ubiquitin specific peptidase 48##BC143349|USP48|84196|ubiquitin specific peptidase 48##BC143354|USP48|84196|ubiquitin specific peptidase 48##AK074247|USP48|84196|ubiquitin specific peptidase 48##AF502942|USP48|84196|ubiquitin specific peptidase 48##BC011576|USP48|84196|ubiquitin specific peptidase 48##BC103724|USP48|84196|ubiquitin specific peptidase 48##BC067261|USP48|84196|ubiquitin specific peptidase 48##NM_001032730|USP48|84196|ubiquitin specific peptidase 48##NM_032236|USP48|84196|ubiquitin specific peptidase 48	0.985412	CTCF.p2:9:0.985
chr1	240772156	240772247	reg1038824.p1	3.392	+	TSC_hg19_v1_chr1_+_240255182 NM_020066	-517024	+	AF279779 NM_000740	-979829	+	TSC_hg19_v1_chr1_+_239550016 AK056349	-1222259	+	BC046632 TSC_hg19_v1_chr1_-_240775431	3208	-	AK024848 TSC_hg19_v1_chr1_-_240775456 NM_022469	3253	-	AF090116 AK314862 TSC_hg19_v1_chr1_-_241520451	748217	-	NM_020066|FMN2|56776|formin 2##AF279779|CHRM3|1131|cholinergic receptor, muscarinic 3##NM_000740|CHRM3|1131|cholinergic receptor, muscarinic 3##AK056349|CHRM3|1131|cholinergic receptor, muscarinic 3##BC046632|GREM2|64388|gremlin 2##AK024848|GREM2|64388|gremlin 2##NM_022469|GREM2|64388|gremlin 2##AF090116|RGS7|6000|regulator of G-protein signaling 7##AK314862|RGS7|6000|regulator of G-protein signaling 7	0.990384	CTCF.p2:27:0.990
chr13	24445570	24445751	reg1008103.p3	3.392	+	TSC_hg19_v1_chr13_+_24153521 BC035796 NM_001204458 NM_018647 AY358888 AF167555	-292128	+	TSC_hg19_v1_chr13_+_24144402 NM_001204459 NM_148957	-301205	+	TSC_hg19_v1_chr13_-_24007842 NM_014363	-437820	-	TSC_hg19_v1_chr13_+_24463019 BC015452 BC073902 NM_001014442	17356	+	TSC_hg19_v1_chr13_-_24463540 DQ893610 DQ896839 AK291923 U80034 AK225290 AK308908 BC009934 NM_005932	17854	-	NM_001135816 BC142999	17932	+	BC035796|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204458|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_018647|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AY358888|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##AF167555|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_001204459|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_148957|TNFRSF19|55504|tumor necrosis factor receptor superfamily, member 19##NM_014363|SACS|26278|spastic ataxia of Charlevoix-Saguenay (sacsin)##BC015452|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC073902|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##NM_001014442|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##DQ893610|MIPEP|4285|mitochondrial intermediate peptidase##DQ896839|MIPEP|4285|mitochondrial intermediate peptidase##AK291923|MIPEP|4285|mitochondrial intermediate peptidase##U80034|MIPEP|4285|mitochondrial intermediate peptidase##AK225290|MIPEP|4285|mitochondrial intermediate peptidase##AK308908|MIPEP|4285|mitochondrial intermediate peptidase##BC009934|MIPEP|4285|mitochondrial intermediate peptidase##NM_005932|MIPEP|4285|mitochondrial intermediate peptidase##NM_001135816|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)##BC142999|C1QTNF9B-AS1|542767|C1QTNF9B antisense RNA 1 (non-protein coding)	0.0	
chr13	25221922	25221995	reg1040892.p1	3.392	+	TSC_hg19_v1_chr13_-_25086917 BC017815 AF057160 AK304399 AF158255 NM_006437	-135047	-	BC040438 NM_178540 AY358145	-338241	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	-377060	+	AK292968 NM_001185085 NM_001676	32590	+	BC037275 NM_001184993 NM_031277 BC146822 AK302405 AK302435 BC048962 AF285602 AF285603	116361	+	BC113662 BC113664 BC143757 BC143758 TSC_hg19_v1_chr13_-_25497000 BC113110 BC113111 AL833182 BC092467 AF139625 AK292406	275011	-	BC017815|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF057160|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AK304399|PARP4|143|poly (ADP-ribose) polymerase family, member 4##AF158255|PARP4|143|poly (ADP-ribose) polymerase family, member 4##NM_006437|PARP4|143|poly (ADP-ribose) polymerase family, member 4##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13##AK292968|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001185085|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##NM_001676|ATP12A|479|ATPase, H+/K+ transporting, nongastric, alpha polypeptide##BC037275|RNF17|56163|ring finger protein 17##NM_001184993|RNF17|56163|ring finger protein 17##NM_031277|RNF17|56163|ring finger protein 17##BC146822|RNF17|56163|ring finger protein 17##AK302405|RNF17|56163|ring finger protein 17##AK302435|RNF17|56163|ring finger protein 17##AF285602|RNF17|56163|ring finger protein 17##AF285603|RNF17|56163|ring finger protein 17##BC113662|CENPJ|55835|centromere protein J##BC113664|CENPJ|55835|centromere protein J##BC143757|CENPJ|55835|centromere protein J##BC143758|CENPJ|55835|centromere protein J##BC113110|CENPJ|55835|centromere protein J##BC113111|CENPJ|55835|centromere protein J##AL833182|CENPJ|55835|centromere protein J##BC092467|CENPJ|55835|centromere protein J##AF139625|CENPJ|55835|centromere protein J##AK292406|CENPJ|55835|centromere protein J	0.0	
chr14	89913781	89913914	reg1043410.p1	3.392	+	TSC_hg19_v1_chr14_-_89883455 BC007506 NM_005197	-30437	-	TSC_hg19_v1_chr14_-_89878738 AB528050 CU675677 EU831970 EU832063	-35071	-	TSC_hg19_v1_chr14_+_89290970 AK315772 AK093891 AX748355 NM_144596 NM_198309 NM_198310 AK296077 AY366523 AY366524 AY373972 BC026351 BX248071 AK124675 BX161472 BC095433 AL833901 CU693230	-622854	+	TSC_hg19_v1_chr14_-_90085494 AK225967 AK308053 NM_001085471	171748	-	BC001787 BX247991 AK298930 AK094740 NM_145231	507213	-	TSC_hg19_v1_chr14_+_90422250 BC107877 NM_001008744 NM_018319	508399	+	BC007506|FOXN3|1112|forkhead box N3##NM_005197|FOXN3|1112|forkhead box N3##EU831970|FOXN3|1112|forkhead box N3##EU832063|FOXN3|1112|forkhead box N3##AK315772|TTC8|123016|tetratricopeptide repeat domain 8##AK093891|TTC8|123016|tetratricopeptide repeat domain 8##NM_144596|TTC8|123016|tetratricopeptide repeat domain 8##NM_198309|TTC8|123016|tetratricopeptide repeat domain 8##NM_198310|TTC8|123016|tetratricopeptide repeat domain 8##AK296077|TTC8|123016|tetratricopeptide repeat domain 8##AY366523|TTC8|123016|tetratricopeptide repeat domain 8##AY366524|TTC8|123016|tetratricopeptide repeat domain 8##AY373972|TTC8|123016|tetratricopeptide repeat domain 8##BC026351|TTC8|123016|tetratricopeptide repeat domain 8##BX248071|TTC8|123016|tetratricopeptide repeat domain 8##AK124675|TTC8|123016|tetratricopeptide repeat domain 8##BX161472|TTC8|123016|tetratricopeptide repeat domain 8##BC095433|TTC8|123016|tetratricopeptide repeat domain 8##AL833901|TTC8|123016|tetratricopeptide repeat domain 8##AK225967|FOXN3|1112|forkhead box N3##AK308053|FOXN3|1112|forkhead box N3##NM_001085471|FOXN3|1112|forkhead box N3##BC001787|EFCAB11|90141|EF-hand calcium binding domain 11##BX247991|EFCAB11|90141|EF-hand calcium binding domain 11##AK298930|EFCAB11|90141|EF-hand calcium binding domain 11##AK094740|EFCAB11|90141|EF-hand calcium binding domain 11##NM_145231|EFCAB11|90141|EF-hand calcium binding domain 11##BC107877|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_001008744|TDP1|55775|tyrosyl-DNA phosphodiesterase 1##NM_018319|TDP1|55775|tyrosyl-DNA phosphodiesterase 1	0.0	
chr15	102181252	102181410	reg1008782.p1	3.392	+	TSC_hg19_v1_chr15_-_102030140 NM_002570 NM_138319 NM_138320 NM_138321 NM_138322 NM_138323 NM_138324 NM_138325	-151169	-	TSC_hg19_v1_chr15_-_102029995 M80482 M80482	-151298	-	TSC_hg19_v1_chr15_-_102029982 D87993 D87994 D87995	-151376	-	TSC_hg19_v1_chr15_-_102192580 BC006150 BC008873 AF353992 AK315584 AK297048 AK026257 AK296553 NM_025141 NM_078474	11135	-	TSC_hg19_v1_chr15_-_102264638 BC132671 BC136315 BC143943 AK056653 AX721055 NM_152334	83324	-	BC137002 BC137003 NM_001005326	164580	+	NM_002570|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138319|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138320|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138321|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138322|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138323|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138324|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##NM_138325|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##M80482|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87993|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87994|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##D87995|PCSK6|5046|proprotein convertase subtilisin/kexin type 6##BC006150|TM2D3|80213|TM2 domain containing 3##BC008873|TM2D3|80213|TM2 domain containing 3##AF353992|TM2D3|80213|TM2 domain containing 3##AK315584|TM2D3|80213|TM2 domain containing 3##AK297048|TM2D3|80213|TM2 domain containing 3##AK026257|TM2D3|80213|TM2 domain containing 3##AK296553|TM2D3|80213|TM2 domain containing 3##NM_025141|TM2D3|80213|TM2 domain containing 3##NM_078474|TM2D3|80213|TM2 domain containing 3##BC132671|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC136315|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC143943|TARSL2|123283|threonyl-tRNA synthetase-like 2##AK056653|TARSL2|123283|threonyl-tRNA synthetase-like 2##NM_152334|TARSL2|123283|threonyl-tRNA synthetase-like 2##BC137002|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##BC137003|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6##NM_001005326|OR4F6|390648|olfactory receptor, family 4, subfamily F, member 6	0.0	
chr16	27243468	27243649	reg1032267.p1	3.392	+	AK297166 NM_001145348	-28263	+	NM_024773 AK023860 BC027911 AK310885 TSC_hg19_v1_chr16_+_27214846 AK225066	-28731	+	NM_001145545 BC031257 AK311574	-165311	+	TSC_hg19_v1_chr16_-_27280055 AK315674	36494	-	TSC_hg19_v1_chr16_-_27280058 AF161451 AF161455 AK056795 NM_145080	36527	-	TSC_hg19_v1_chr16_+_27325254 AK314863 NM_000418 NM_001008699 AK303255	81696	+	AK297166|JMJD5|79831|jumonji domain containing 5##NM_001145348|JMJD5|79831|jumonji domain containing 5##NM_024773|JMJD5|79831|jumonji domain containing 5##AK023860|JMJD5|79831|jumonji domain containing 5##BC027911|JMJD5|79831|jumonji domain containing 5##AK310885|JMJD5|79831|jumonji domain containing 5##AK225066|JMJD5|79831|jumonji domain containing 5##NM_001145545|C16orf82|162083|chromosome 16 open reading frame 82##BC031257|C16orf82|162083|chromosome 16 open reading frame 82##AK311574|C16orf82|162083|chromosome 16 open reading frame 82##AK315674|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AF161451|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AF161455|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AK056795|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##NM_145080|NSMCE1|197370|non-SMC element 1 homolog (S. cerevisiae)##AK314863|IL4R|3566|interleukin 4 receptor##NM_000418|IL4R|3566|interleukin 4 receptor##NM_001008699|IL4R|3566|interleukin 4 receptor##AK303255|IL4R|3566|interleukin 4 receptor	0.0	
chr17	65590506	65590599	reg1026799.p2	3.392	+	BC007905 NM_012417 NM_181671	-216629	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-216964	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-217143	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	123498	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	231150	+	AK293224 TSC_hg19_v1_chr17_+_65822221	231665	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.0	
chr18	53245156	53245253	reg1039716.p2	3.392	+	AK096862 NM_001243231	-67205	-	AK300612 NM_001243233	-155482	-	AK095041 NM_001243232	-173979	-	TSC_hg19_v1_chr18_-_53255424 M74719	10216	-	FR748206 FR748216 TSC_hg19_v1_chr18_-_53255849 AK122765 NM_001083962 NM_001243230 NM_003199	10593	-	AK315074 AK299169 NM_001243227 NM_001243228	11834	-	AK096862|TCF4|6925|transcription factor 4##NM_001243231|TCF4|6925|transcription factor 4##AK300612|TCF4|6925|transcription factor 4##NM_001243233|TCF4|6925|transcription factor 4##AK095041|TCF4|6925|transcription factor 4##NM_001243232|TCF4|6925|transcription factor 4##M74719|TCF4|6925|transcription factor 4##FR748216|TCF4|6925|transcription factor 4##AK122765|TCF4|6925|transcription factor 4##NM_001083962|TCF4|6925|transcription factor 4##NM_001243230|TCF4|6925|transcription factor 4##NM_003199|TCF4|6925|transcription factor 4##AK315074|TCF4|6925|transcription factor 4##AK299169|TCF4|6925|transcription factor 4##NM_001243227|TCF4|6925|transcription factor 4##NM_001243228|TCF4|6925|transcription factor 4	0.134736	
chr18	74779612	74779745	reg1041846.p2	3.392	+	TSC_hg19_v1_chr18_-_74729052 AK314553 NM_001025081 NM_001025090 NM_001025092 NM_002385 AK293922	-50611	-	CR536534 CR541919 TSC_hg19_v1_chr18_-_74729012 AK296492 M30515 M30516 BC008749 BC101771 BC101773 BC143348 BC143350 M30047 BC080654 M13577 AK289893 AK098402 AK128788 CR627018 AK128770 BC068550	-50683	-	AK074315 TSC_hg19_v1_chr18_-_74728814	-50922	-	TSC_hg19_v1_chr18_-_74844720 BC065248 AB208986 L18865	65039	-	TSC_hg19_v1_chr18_-_74844774 NM_001025100 NM_001025101	65101	-	TSC_hg19_v1_chr18_+_74961925 NM_001480	182288	+	AK314553|MBP|4155|myelin basic protein##NM_001025081|MBP|4155|myelin basic protein##NM_001025090|MBP|4155|myelin basic protein##NM_001025092|MBP|4155|myelin basic protein##NM_002385|MBP|4155|myelin basic protein##AK293922|MBP|4155|myelin basic protein##CR536534|MBP|4155|myelin basic protein##CR541919|MBP|4155|myelin basic protein##M30515|MBP|4155|myelin basic protein##M30516|MBP|4155|myelin basic protein##BC008749|MBP|4155|myelin basic protein##BC101771|MBP|4155|myelin basic protein##BC101773|MBP|4155|myelin basic protein##BC143348|MBP|4155|myelin basic protein##BC143350|MBP|4155|myelin basic protein##M30047|MBP|4155|myelin basic protein##BC080654|MBP|4155|myelin basic protein##M13577|MBP|4155|myelin basic protein##AK289893|MBP|4155|myelin basic protein##AK098402|MBP|4155|myelin basic protein##AK128788|MBP|4155|myelin basic protein##CR627018|MBP|4155|myelin basic protein##AK128770|MBP|4155|myelin basic protein##BC068550|MBP|4155|myelin basic protein##AK074315|MBP|4155|myelin basic protein##BC065248|MBP|4155|myelin basic protein##AB208986|MBP|4155|myelin basic protein##L18865|MBP|4155|myelin basic protein##NM_001025100|MBP|4155|myelin basic protein##NM_001025101|MBP|4155|myelin basic protein##NM_001480|GALR1|2587|galanin receptor 1	0.0	
chr20	42554501	42554616	reg1038031.p2	3.392	+	NM_001098796 NM_032883 TSC_hg19_v1_chr20_+_42544789 AK289906 BC007636	-9765	+	TSC_hg19_v1_chr20_+_42543491 NM_001098797 AB591023	-11071	+	BC040049 AK058060 NM_001008901 NM_176791	-198955	-	NM_001098798	19977	+	AL132999 TSC_hg19_v1_chr20_-_42815818 AK304863	261235	-	BC029957 NM_020433 NM_175913	261659	-	NM_001098796|TOX2|84969|TOX high mobility group box family member 2##NM_032883|TOX2|84969|TOX high mobility group box family member 2##AK289906|TOX2|84969|TOX high mobility group box family member 2##BC007636|TOX2|84969|TOX high mobility group box family member 2##NM_001098797|TOX2|84969|TOX high mobility group box family member 2##BC040049|GTSF1L|149699|gametocyte specific factor 1-like##AK058060|GTSF1L|149699|gametocyte specific factor 1-like##NM_001008901|GTSF1L|149699|gametocyte specific factor 1-like##NM_176791|GTSF1L|149699|gametocyte specific factor 1-like##NM_001098798|TOX2|84969|TOX high mobility group box family member 2##AL132999|JPH2|57158|junctophilin 2##AK304863|JPH2|57158|junctophilin 2##BC029957|JPH2|57158|junctophilin 2##NM_020433|JPH2|57158|junctophilin 2##NM_175913|JPH2|57158|junctophilin 2	0.0	
chr20	9947646	9947772	reg1029421.p1	3.392	+	TSC_hg19_v1_chr20_-_9819519 AB040812 BC024179 AK291401 AK307926 AK095674 AK315820 NM_020341 NM_177990 AB033090 AX776013	-128142	-	TSC_hg19_v1_chr20_+_9495437 CU690786	-452247	+	AL121740 BC050727 TSC_hg19_v1_chr20_+_9495326	-452397	+	NM_022096 NM_198798 AK097689 TSC_hg19_v1_chr20_+_10015744 BC022878 BC028189 BC011591	68023	+	TSC_hg19_v1_chr20_+_10199575 NM_003081 NM_130811 AK094560 AK098347 D21267 AK223617 AK314359 AK289647 BC010647 BX647443 AK098767 L19760 L19761	251818	+	TSC_hg19_v1_chr20_-_10200139 AK124961	252434	-	AB040812|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##BC024179|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK291401|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK307926|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK095674|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AK315820|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_020341|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##NM_177990|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AB033090|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AX776013|PAK7|57144|p21 protein (Cdc42/Rac)-activated kinase 7##AL121740|LAMP5|24141|lysosomal-associated membrane protein family, member 5##BC050727|LAMP5|24141|lysosomal-associated membrane protein family, member 5##NM_022096|ANKRD5|63926|ankyrin repeat domain 5##NM_198798|ANKRD5|63926|ankyrin repeat domain 5##AK097689|ANKRD5|63926|ankyrin repeat domain 5##BC022878|ANKRD5|63926|ankyrin repeat domain 5##BC028189|ANKRD5|63926|ankyrin repeat domain 5##BC011591|ANKRD5|63926|ankyrin repeat domain 5##NM_003081|SNAP25|6616|synaptosomal-associated protein, 25kDa##NM_130811|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK094560|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098347|SNAP25|6616|synaptosomal-associated protein, 25kDa##D21267|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK223617|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK314359|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK289647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BC010647|SNAP25|6616|synaptosomal-associated protein, 25kDa##BX647443|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK098767|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19760|SNAP25|6616|synaptosomal-associated protein, 25kDa##L19761|SNAP25|6616|synaptosomal-associated protein, 25kDa##AK124961|LOC100131208|100131208|uncharacterized LOC100131208	0.0	
chr2	6056509	6056598	reg1018221.p2	3.392	+	U23752 AB028641 NM_003108 BC025789 AB464713	-223738	+	AK302299 NM_018436 BC029652	-2350756	+	AK313840 AB119525 AB119650 AB119651 AB119652 NM_024027 NM_199235 BC009951 TSC_hg19_v1_chr2_+_3642701 BC000078 AY358439	-2413984	+	TSC_hg19_v1_chr2_-_7005793 BC089425 BC141802 NM_207315 BC132821 BC144202 AK127983	949347	-	TSC_hg19_v1_chr2_-_7006650 AK308509	950150	-	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	961310	+	U23752|SOX11|6664|SRY (sex determining region Y)-box 11##AB028641|SOX11|6664|SRY (sex determining region Y)-box 11##NM_003108|SOX11|6664|SRY (sex determining region Y)-box 11##BC025789|SOX11|6664|SRY (sex determining region Y)-box 11##AK302299|ALLC|55821|allantoicase##NM_018436|ALLC|55821|allantoicase##BC029652|ALLC|55821|allantoicase##AK313840|COLEC11|78989|collectin sub-family member 11##AB119525|COLEC11|78989|collectin sub-family member 11##AB119650|COLEC11|78989|collectin sub-family member 11##AB119651|COLEC11|78989|collectin sub-family member 11##AB119652|COLEC11|78989|collectin sub-family member 11##NM_024027|COLEC11|78989|collectin sub-family member 11##NM_199235|COLEC11|78989|collectin sub-family member 11##BC009951|COLEC11|78989|collectin sub-family member 11##BC000078|COLEC11|78989|collectin sub-family member 11##AY358439|COLEC11|78989|collectin sub-family member 11##BC089425|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC141802|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_207315|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC132821|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##BC144202|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK127983|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2	0.0	
chr6	42288557	42288626	reg1045219.p1	3.392	+	TSC_hg19_v1_chr6_-_42185603 NM_018141	-102974	-	TSC_hg19_v1_chr6_-_42185600 AK001429	-102991	-	TSC_hg19_v1_chr6_-_42185597 AK316599 BC012560	-102994	-	AF297872 NM_033502 AM404182 AM404183 AM404259 TSC_hg19_v1_chr6_-_42419826 AK308473	131232	-	TSC_hg19_v1_chr6_+_42531736 NM_001184801 NM_015255	243159	+	TSC_hg19_v1_chr6_+_42531768 BC024217 BC064512	243186	+	NM_018141|MRPS10|55173|mitochondrial ribosomal protein S10##AK001429|MRPS10|55173|mitochondrial ribosomal protein S10##AK316599|MRPS10|55173|mitochondrial ribosomal protein S10##BC012560|MRPS10|55173|mitochondrial ribosomal protein S10##AF297872|TRERF1|55809|transcriptional regulating factor 1##NM_033502|TRERF1|55809|transcriptional regulating factor 1##AM404182|TRERF1|55809|transcriptional regulating factor 1##AM404183|TRERF1|55809|transcriptional regulating factor 1##AM404259|TRERF1|55809|transcriptional regulating factor 1##AK308473|TRERF1|55809|transcriptional regulating factor 1##NM_001184801|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##NM_015255|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC024217|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2##BC064512|UBR2|23304|ubiquitin protein ligase E3 component n-recognin 2	0.0	
chr9	116270407	116270548	reg1041477.p1	3.392	+	AF463495 NM_130795 AK096840 BC042555 CU692096 AF490840	-6696	+	TSC_hg19_v1_chr9_+_116226007 AK125059 NM_017790 AK074977	-44463	+	AK128127 NM_144488	-63467	+	TSC_hg19_v1_chr9_+_116327336 AK289666 AK301515 AK310705 NM_134427	56855	+	AF006609 NM_021106	72462	+	U27655 AK125094 TSC_hg19_v1_chr9_+_116343207	72711	+	AF463495|RGS3|5998|regulator of G-protein signaling 3##NM_130795|RGS3|5998|regulator of G-protein signaling 3##AK096840|RGS3|5998|regulator of G-protein signaling 3##BC042555|RGS3|5998|regulator of G-protein signaling 3##AF490840|RGS3|5998|regulator of G-protein signaling 3##AK125059|RGS3|5998|regulator of G-protein signaling 3##NM_017790|RGS3|5998|regulator of G-protein signaling 3##AK074977|RGS3|5998|regulator of G-protein signaling 3##AK128127|RGS3|5998|regulator of G-protein signaling 3##NM_144488|RGS3|5998|regulator of G-protein signaling 3##AK289666|RGS3|5998|regulator of G-protein signaling 3##AK301515|RGS3|5998|regulator of G-protein signaling 3##AK310705|RGS3|5998|regulator of G-protein signaling 3##NM_134427|RGS3|5998|regulator of G-protein signaling 3##AF006609|RGS3|5998|regulator of G-protein signaling 3##NM_021106|RGS3|5998|regulator of G-protein signaling 3##U27655|RGS3|5998|regulator of G-protein signaling 3##AK125094|RGS3|5998|regulator of G-protein signaling 3	0.026532	
chr9	37565501	37565602	reg1022948.p1	3.392	+	TSC_hg19_v1_chr9_+_37485944 BC014331 AK023452 AK302345 AK303167 NM_022490 AK301347 AK024032 AK225050 BC017766 BC001337 CR457313 AK091294 AX746899	-79521	+	TSC_hg19_v1_chr9_-_37465448 AK292404	-100110	-	TSC_hg19_v1_chr9_-_37465398 AB002352 NM_014872	-100156	-	AF174598 AF176705 NM_012166 TSC_hg19_v1_chr9_-_37576280	10714	-	CR627326 AB435233 TSC_hg19_v1_chr9_-_37592574 BC034247	26968	-	TSC_hg19_v1_chr9_-_37592575 BC029423 NM_001001790 NM_001134484 NM_001134485	27054	-	BC014331|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK023452|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK302345|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK303167|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##NM_022490|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK301347|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK024032|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK225050|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC017766|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##BC001337|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##CR457313|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK091294|POLR1E|64425|polymerase (RNA) I polypeptide E, 53kDa##AK292404|ZBTB5|9925|zinc finger and BTB domain containing 5##AB002352|ZBTB5|9925|zinc finger and BTB domain containing 5##NM_014872|ZBTB5|9925|zinc finger and BTB domain containing 5##AF174598|FBXO10|26267|F-box protein 10##AF176705|FBXO10|26267|F-box protein 10##NM_012166|FBXO10|26267|F-box protein 10##AB435233|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC034247|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##BC029423|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001001790|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134484|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)##NM_001134485|TOMM5|401505|translocase of outer mitochondrial membrane 5 homolog (yeast)	0.0	
chr9	74398112	74398216	reg1039568.p1	3.392	+	BC140773 BC144510 BC171782 AB037833 BC146780 TSC_hg19_v1_chr9_-_74383430 AF137030 AK300405 AK056807 NM_001135820 NM_013390	-14586	-	AL136545 TSC_hg19_v1_chr9_-_74061901	-336281	-	AJ505025 AJ505026 NM_001007471 TSC_hg19_v1_chr9_-_73736559	-661628	-	AF151825 TSC_hg19_v1_chr9_-_74525994	127761	-	TSC_hg19_v1_chr9_-_74526110 BC044576 NM_001025780 NM_016014 AK293060	127992	-	TSC_hg19_v1_chr9_+_74526393 NM_182505 BC010179	128237	+	BC140773|TMEM2|23670|transmembrane protein 2##BC144510|TMEM2|23670|transmembrane protein 2##BC171782|TMEM2|23670|transmembrane protein 2##AB037833|TMEM2|23670|transmembrane protein 2##BC146780|TMEM2|23670|transmembrane protein 2##AF137030|TMEM2|23670|transmembrane protein 2##AK300405|TMEM2|23670|transmembrane protein 2##NM_001135820|TMEM2|23670|transmembrane protein 2##NM_013390|TMEM2|23670|transmembrane protein 2##AL136545|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505025|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AJ505026|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##NM_001007471|TRPM3|80036|transient receptor potential cation channel, subfamily M, member 3##AF151825|FAM108B1|51104|family with sequence similarity 108, member B1##BC044576|FAM108B1|51104|family with sequence similarity 108, member B1##NM_001025780|FAM108B1|51104|family with sequence similarity 108, member B1##NM_016014|FAM108B1|51104|family with sequence similarity 108, member B1##AK293060|FAM108B1|51104|family with sequence similarity 108, member B1##NM_182505|C9orf85|138241|chromosome 9 open reading frame 85##BC010179|C9orf85|138241|chromosome 9 open reading frame 85	0.0	
chrX	106552019	106552085	reg1043900.p1	3.392	+	BC033510 NM_001169154 NM_173494	-102191	+	AK000137 TSC_hg19_v1_chrX_-_106449664 BC016327 BC017799 NM_017681	-102446	-	TSC_hg19_v1_chrX_-_106362053 AK023732 NM_001171080 NM_018301	-189992	-	NM_001204402 NM_002764 TSC_hg19_v1_chrX_+_106871719 D00860	319643	+	AK307748 AK312706 AK316467 TSC_hg19_v1_chrX_+_106871744 AK297968 BC001605 X15331 AK223169 DQ895833 EU176362 AB464022 CU674782	319746	+	BC018148 Z50781 NM_001015881	407601	-	BC033510|CXorf41|139212|chromosome X open reading frame 41##NM_001169154|CXorf41|139212|chromosome X open reading frame 41##NM_173494|CXorf41|139212|chromosome X open reading frame 41##AK000137|NUP62CL|54830|nucleoporin 62kDa C-terminal like##BC016327|NUP62CL|54830|nucleoporin 62kDa C-terminal like##BC017799|NUP62CL|54830|nucleoporin 62kDa C-terminal like##NM_017681|NUP62CL|54830|nucleoporin 62kDa C-terminal like##AK023732|RBM41|55285|RNA binding motif protein 41##NM_001171080|RBM41|55285|RNA binding motif protein 41##NM_018301|RBM41|55285|RNA binding motif protein 41##NM_001204402|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##NM_002764|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##D00860|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK307748|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK312706|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK316467|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK297968|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC001605|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##X15331|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##AK223169|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##DQ895833|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##EU176362|PRPS1|5631|phosphoribosyl pyrophosphate synthetase 1##BC018148|TSC22D3|1831|TSC22 domain family, member 3##Z50781|TSC22D3|1831|TSC22 domain family, member 3##NM_001015881|TSC22D3|1831|TSC22 domain family, member 3	0.0	
chr10	111975401	111975581	reg1040626.p1	3.391	+	BC012907 NM_001008541	-5503	+	TSC_hg19_v1_chr10_+_111967381 BC035128 NM_130439	-8132	+	AK291488 TSC_hg19_v1_chr10_+_111767988 U37122 BC043143	-207524	+	TSC_hg19_v1_chr10_+_111985824 AK303949 NM_005962 CR536576 AK309718	10330	+	BC039110 TSC_hg19_v1_chr10_-_112064679 AK314013 AF107463	89102	-	TSC_hg19_v1_chr10_-_112064705 BC011234 NM_005871	89209	-	BC012907|MXI1|4601|MAX interactor 1##NM_001008541|MXI1|4601|MAX interactor 1##BC035128|MXI1|4601|MAX interactor 1##NM_130439|MXI1|4601|MAX interactor 1##AK291488|ADD3|120|adducin 3 (gamma)##U37122|ADD3|120|adducin 3 (gamma)##BC043143|ADD3|120|adducin 3 (gamma)##AK303949|MXI1|4601|MAX interactor 1##NM_005962|MXI1|4601|MAX interactor 1##CR536576|MXI1|4601|MAX interactor 1##AK309718|MXI1|4601|MAX interactor 1##BC039110|SMNDC1|10285|survival motor neuron domain containing 1##AK314013|SMNDC1|10285|survival motor neuron domain containing 1##AF107463|SMNDC1|10285|survival motor neuron domain containing 1##BC011234|SMNDC1|10285|survival motor neuron domain containing 1##NM_005871|SMNDC1|10285|survival motor neuron domain containing 1	0.038157	
chr11	128628248	128628350	reg1014696.p3	3.391	+	TSC_hg19_v1_chr11_+_128564132 AB385119 AY029368 CU674822 DQ892582 DQ896858	-64157	+	TSC_hg19_v1_chr11_+_128563997 X67001 S45205 BC010115 BC001670	-64244	+	TSC_hg19_v1_chr11_+_128563978 M93255 AK300153 M98833	-64319	+	BC136360 BC136361 BC074752 NM_000220 U12541 AK314267 AK290797	84079	-	U12544 U12545 AK308032 U12543 U03884 AK308033 BC063109 NM_153764 NM_153765 NM_153766 NM_153767 U12542	108900	-	AK312837 NM_000890 D50134 BC069386 BC069482 BC069499 BC069571 U39195	133041	+	AY029368|FLI1|2313|Friend leukemia virus integration 1##DQ892582|FLI1|2313|Friend leukemia virus integration 1##DQ896858|FLI1|2313|Friend leukemia virus integration 1##X67001|FLI1|2313|Friend leukemia virus integration 1##S45205|FLI1|2313|Friend leukemia virus integration 1##BC010115|FLI1|2313|Friend leukemia virus integration 1##BC001670|FLI1|2313|Friend leukemia virus integration 1##M93255|FLI1|2313|Friend leukemia virus integration 1##AK300153|FLI1|2313|Friend leukemia virus integration 1##M98833|FLI1|2313|Friend leukemia virus integration 1##BC136360|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC136361|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC074752|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_000220|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12541|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK314267|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK290797|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12544|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12545|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308032|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12543|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U03884|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK308033|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##BC063109|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153764|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153765|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153766|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##NM_153767|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##U12542|KCNJ1|3758|potassium inwardly-rectifying channel, subfamily J, member 1##AK312837|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##NM_000890|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##D50134|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069386|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069482|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069499|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##BC069571|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5##U39195|KCNJ5|3762|potassium inwardly-rectifying channel, subfamily J, member 5	0.026855	
chr12	133037313	133037414	reg1033966.p2	3.391	+	BC069354 AB040672 NM_001122636 BC157845 BC171844	-131506	-	AF458594 NM_021808	-346791	-	TSC_hg19_v1_chr12_+_132629014 BC071958 CU687200 DQ892518 DQ895730 BC007893	-408307	+	NM_001142641	29793	+	NM_001195520	149673	-	AF260426 TSC_hg19_v1_chr12_+_133195386 AF190822 AF190823 AF190824 AF190825 AF260427 AF260428 AF260429 AY346374 BC109200 NM_012226 NM_016318 NM_170682 NM_170683 NM_174872 NM_174873 AF109387 AF109388	158041	+	BC069354|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AB040672|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_001122636|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC157845|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC171844|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##AF458594|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##NM_021808|GALNT9|50614|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 9 (GalNAc-T9)##BC071958|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ892518|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##DQ895730|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##BC007893|NOC4L|79050|nucleolar complex associated 4 homolog (S. cerevisiae)##NM_001142641|FBRSL1|57666|fibrosin-like 1##NM_001195520|LOC100507055|100507055|uncharacterized LOC100507055##AF260426|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190822|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190823|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190824|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF190825|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260427|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260428|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF260429|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AY346374|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##BC109200|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_012226|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_016318|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170682|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_170683|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174872|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##NM_174873|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109387|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2##AF109388|P2RX2|22953|purinergic receptor P2X, ligand-gated ion channel, 2	0.612153	CTCF.p2:-12:0.612
chr16	68118527	68118594	reg1026325.p1	3.391	+	NM_018380	-60791	-	AK290578 TSC_hg19_v1_chr16_+_68057186 AB101210 AK296663 AK000406 BC006527 NM_017803	-61385	+	TSC_hg19_v1_chr16_-_68057129 BC014517	-61432	-	TSC_hg19_v1_chr16_+_68119279 NM_004555 NM_173163 NM_173165	694	+	TSC_hg19_v1_chr16_+_68119335 AB209824	778	+	TSC_hg19_v1_chr16_+_68119350 L41067	809	+	NM_018380|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##AK290578|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AB101210|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK296663|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##AK000406|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC006527|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##NM_017803|DUS2L|54920|dihydrouridine synthase 2-like, SMM1 homolog (S. cerevisiae)##BC014517|DDX28|55794|DEAD (Asp-Glu-Ala-Asp) box polypeptide 28##NM_004555|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173163|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##NM_173165|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##AB209824|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3##L41067|NFATC3|4775|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 3	0.018264	
chr16	81553567	81553685	reg1035079.p2	3.391	+	AY172689 NM_030629	-24673	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-74793	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-204976	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	259271	+	TSC_hg19_v1_chr16_+_81812901 AB208914	259276	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	259304	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr19	18174456	18174637	reg1007553.p2	3.391	+	TSC_hg19_v1_chr19_+_18118978 AF193051 NM_015683 AK000689 AK128588 BC022516 AK314657 AB529119	-55528	+	TSC_hg19_v1_chr19_+_18111932 NM_001025604 AK127940	-62596	+	NM_002248 U69883	-112436	+	EU832463 EU832545 BC137404 BC137406 NM_005535 NM_153701 U03187 BC029121 TSC_hg19_v1_chr19_-_18197721 AK225919 AK290423	23186	-	TSC_hg19_v1_chr19_+_18208608 AB527184 NM_015016 AB011133	34063	+	BC063240 TSC_hg19_v1_chr19_+_18263972	89435	+	AF193051|ARRDC2|27106|arrestin domain containing 2##NM_015683|ARRDC2|27106|arrestin domain containing 2##AK000689|ARRDC2|27106|arrestin domain containing 2##AK128588|ARRDC2|27106|arrestin domain containing 2##BC022516|ARRDC2|27106|arrestin domain containing 2##AK314657|ARRDC2|27106|arrestin domain containing 2##NM_001025604|ARRDC2|27106|arrestin domain containing 2##AK127940|ARRDC2|27106|arrestin domain containing 2##NM_002248|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##U69883|KCNN1|3780|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 1##EU832463|IL12RB1|3594|interleukin 12 receptor, beta 1##EU832545|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137404|IL12RB1|3594|interleukin 12 receptor, beta 1##BC137406|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_005535|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_153701|IL12RB1|3594|interleukin 12 receptor, beta 1##U03187|IL12RB1|3594|interleukin 12 receptor, beta 1##BC029121|IL12RB1|3594|interleukin 12 receptor, beta 1##AK225919|IL12RB1|3594|interleukin 12 receptor, beta 1##AK290423|IL12RB1|3594|interleukin 12 receptor, beta 1##NM_015016|MAST3|23031|microtubule associated serine/threonine kinase 3##AB011133|MAST3|23031|microtubule associated serine/threonine kinase 3	0.171839	
chr19	4000087	4000178	reg1038266.p1	3.391	+	AK297398 AK298498 NM_001961 TSC_hg19_v1_chr19_-_3985462	-14670	-	TSC_hg19_v1_chr19_-_3985455 BC126259 BC136313 BC068002 BC006547 AK299225	-14731	-	TSC_hg19_v1_chr19_-_3984195 AB527843 AY942181 HQ258667 X51466 Z11692	-15881	-	TSC_hg19_v1_chr19_+_4007733 BC066895 AK022481 BC029874 NM_015897 AK222726 AB464092 AF077952 DQ892419 DQ895633 BC010047	7597	+	TSC_hg19_v1_chr19_-_4065504 BC084568	65364	-	BC113511 TSC_hg19_v1_chr19_-_4066828 AF000561 NM_015898 BC064505	66685	-	AK297398|EEF2|1938|eukaryotic translation elongation factor 2##AK298498|EEF2|1938|eukaryotic translation elongation factor 2##NM_001961|EEF2|1938|eukaryotic translation elongation factor 2##BC126259|EEF2|1938|eukaryotic translation elongation factor 2##BC136313|EEF2|1938|eukaryotic translation elongation factor 2##BC006547|EEF2|1938|eukaryotic translation elongation factor 2##AK299225|EEF2|1938|eukaryotic translation elongation factor 2##AY942181|EEF2|1938|eukaryotic translation elongation factor 2##HQ258667|EEF2|1938|eukaryotic translation elongation factor 2##X51466|EEF2|1938|eukaryotic translation elongation factor 2##Z11692|EEF2|1938|eukaryotic translation elongation factor 2##BC066895|PIAS4|51588|protein inhibitor of activated STAT, 4##AK022481|PIAS4|51588|protein inhibitor of activated STAT, 4##BC029874|PIAS4|51588|protein inhibitor of activated STAT, 4##NM_015897|PIAS4|51588|protein inhibitor of activated STAT, 4##AK222726|PIAS4|51588|protein inhibitor of activated STAT, 4##AF077952|PIAS4|51588|protein inhibitor of activated STAT, 4##DQ892419|PIAS4|51588|protein inhibitor of activated STAT, 4##DQ895633|PIAS4|51588|protein inhibitor of activated STAT, 4##BC010047|PIAS4|51588|protein inhibitor of activated STAT, 4##BC084568|ZBTB7A|51341|zinc finger and BTB domain containing 7A##BC113511|ZBTB7A|51341|zinc finger and BTB domain containing 7A##AF000561|ZBTB7A|51341|zinc finger and BTB domain containing 7A##NM_015898|ZBTB7A|51341|zinc finger and BTB domain containing 7A	0.016359	
chr2	14525293	14525426	reg1041281.p1	3.391	+	TSC_hg19_v1_chr2_+_12858363 AB529001 CU678082	-1666962	+	TSC_hg19_v1_chr2_+_12857898 AK313237 BC002637	-1667443	+	TSC_hg19_v1_chr2_+_12857176 NM_021643 AY245544 AK299146 D87119	-1668106	+	NM_145175 TSC_hg19_v1_chr2_+_14772817	247462	+	TSC_hg19_v1_chr2_+_14772845 AK092654 AK314463 AX747656 AJ417080 BC029933 BC052284 AF370404	247492	+	AL832774 AF056195 AL833270 TSC_hg19_v1_chr2_-_15701444	1176070	-	AK313237|TRIB2|28951|tribbles homolog 2 (Drosophila)##BC002637|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_021643|TRIB2|28951|tribbles homolog 2 (Drosophila)##AY245544|TRIB2|28951|tribbles homolog 2 (Drosophila)##AK299146|TRIB2|28951|tribbles homolog 2 (Drosophila)##D87119|TRIB2|28951|tribbles homolog 2 (Drosophila)##NM_145175|FAM84A|151354|family with sequence similarity 84, member A##AK092654|FAM84A|151354|family with sequence similarity 84, member A##AK314463|FAM84A|151354|family with sequence similarity 84, member A##AJ417080|FAM84A|151354|family with sequence similarity 84, member A##BC029933|FAM84A|151354|family with sequence similarity 84, member A##BC052284|FAM84A|151354|family with sequence similarity 84, member A##AF370404|FAM84A|151354|family with sequence similarity 84, member A##AL832774|NBAS|51594|neuroblastoma amplified sequence##AF056195|NBAS|51594|neuroblastoma amplified sequence##AL833270|NBAS|51594|neuroblastoma amplified sequence	0.087417	
chr2	240323441	240323549	reg1035391.p1	3.391	+	TSC_hg19_v1_chr2_-_240323341 AK308791	-147	-	TSC_hg19_v1_chr2_-_240322695 BC039904	-797	-	TSC_hg19_v1_chr2_-_240322657 AB006626 NM_006037	-847	-	AF453834 TSC_hg19_v1_chr2_-_240964750 CU678462 DQ891011 DQ894191 BC031332 AF087661 AB209440 AK290778 BC003417 AF087854	641266	-	TSC_hg19_v1_chr2_-_240964807 NM_004544	641317	-	NM_001005853 BC137561 BC137562	646380	-	AK308791|HDAC4|9759|histone deacetylase 4##BC039904|HDAC4|9759|histone deacetylase 4##AB006626|HDAC4|9759|histone deacetylase 4##NM_006037|HDAC4|9759|histone deacetylase 4##AF453834|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ891011|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##DQ894191|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC031332|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087661|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AB209440|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AK290778|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##BC003417|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##AF087854|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_004544|NDUFA10|4705|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa##NM_001005853|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137561|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2##BC137562|OR6B2|389090|olfactory receptor, family 6, subfamily B, member 2	0.0	
chr6	143857777	143857900	reg1043129.p2	3.391	+	CU678350 AK296485 BC003060 AK075458 TSC_hg19_v1_chr6_-_143832841 AY358551 BC051268 AK315475 NM_032020	-24944	-	TSC_hg19_v1_chr6_+_143771941 NM_003630 BC014551 BC015506 AB035307 AK025644 AK300907 AJ001625 AJ131389 AY277600 CR542062 CU677325	-85838	+	TSC_hg19_v1_chr6_-_143771811 BC037955 NM_182503	-86009	-	NM_001100166 NM_014721 AK300221 AB014580 BC152416 BC150630	71524	+	TSC_hg19_v1_chr6_+_143999112 AK298263 NM_001100164 NM_001100165 CR749345 AK297799	141339	+	TSC_hg19_v1_chr6_+_144164476 AK095269 BC009855 NM_032860	306651	+	AK296485|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC003060|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK075458|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AY358551|FUCA2|2519|fucosidase, alpha-L- 2, plasma##BC051268|FUCA2|2519|fucosidase, alpha-L- 2, plasma##AK315475|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_032020|FUCA2|2519|fucosidase, alpha-L- 2, plasma##NM_003630|PEX3|8504|peroxisomal biogenesis factor 3##BC014551|PEX3|8504|peroxisomal biogenesis factor 3##BC015506|PEX3|8504|peroxisomal biogenesis factor 3##AB035307|PEX3|8504|peroxisomal biogenesis factor 3##AK025644|PEX3|8504|peroxisomal biogenesis factor 3##AK300907|PEX3|8504|peroxisomal biogenesis factor 3##AJ001625|PEX3|8504|peroxisomal biogenesis factor 3##AJ131389|PEX3|8504|peroxisomal biogenesis factor 3##AY277600|PEX3|8504|peroxisomal biogenesis factor 3##CR542062|PEX3|8504|peroxisomal biogenesis factor 3##BC037955|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_182503|ADAT2|134637|adenosine deaminase, tRNA-specific 2##NM_001100166|PHACTR2|9749|phosphatase and actin regulator 2##NM_014721|PHACTR2|9749|phosphatase and actin regulator 2##AK300221|PHACTR2|9749|phosphatase and actin regulator 2##AB014580|PHACTR2|9749|phosphatase and actin regulator 2##BC152416|PHACTR2|9749|phosphatase and actin regulator 2##BC150630|PHACTR2|9749|phosphatase and actin regulator 2##AK298263|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100164|PHACTR2|9749|phosphatase and actin regulator 2##NM_001100165|PHACTR2|9749|phosphatase and actin regulator 2##CR749345|PHACTR2|9749|phosphatase and actin regulator 2##AK297799|PHACTR2|9749|phosphatase and actin regulator 2##BC009855|LTV1|84946|LTV1 homolog (S. cerevisiae)##NM_032860|LTV1|84946|LTV1 homolog (S. cerevisiae)	0.0	
chr8	11421834	11421915	reg1013705.p1	3.391	+	S76617 NM_001715 BC018703 BC004473 BC038555	-70281	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-97645	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-216870	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	139846	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	205394	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	238310	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.0	
chr11	94803125	94803210	reg1002212.p2	3.390	+	TSC_hg19_v1_chr11_+_94800406 AF031166	-2759	+	TSC_hg19_v1_chr11_+_94800329 BC057783 BC006181	-2823	+	NM_032102 AK309776 AK312514 AK023379 TSC_hg19_v1_chr11_+_94800281	-2999	+	TSC_hg19_v1_chr11_+_94823009 AK291673 NM_015036 BC026191 AB020637 BC071171 AB385387	19845	+	BC017296 AK096300 NM_144665 TSC_hg19_v1_chr11_-_94964367	161137	-	CU693100 AM392906 DQ891214 DQ894397 TSC_hg19_v1_chr11_-_95522648 BX647586	719484	-	AF031166|SRSF8|10929|serine/arginine-rich splicing factor 8##BC057783|SRSF8|10929|serine/arginine-rich splicing factor 8##NM_032102|SRSF8|10929|serine/arginine-rich splicing factor 8##AK312514|SRSF8|10929|serine/arginine-rich splicing factor 8##AK023379|SRSF8|10929|serine/arginine-rich splicing factor 8##AK291673|ENDOD1|23052|endonuclease domain containing 1##NM_015036|ENDOD1|23052|endonuclease domain containing 1##BC026191|ENDOD1|23052|endonuclease domain containing 1##AB020637|ENDOD1|23052|endonuclease domain containing 1##BC071171|ENDOD1|23052|endonuclease domain containing 1##BC017296|SESN3|143686|sestrin 3##AK096300|SESN3|143686|sestrin 3##NM_144665|SESN3|143686|sestrin 3##AM392906|FAM76B|143684|family with sequence similarity 76, member B##DQ891214|FAM76B|143684|family with sequence similarity 76, member B##DQ894397|FAM76B|143684|family with sequence similarity 76, member B##BX647586|FAM76B|143684|family with sequence similarity 76, member B	0.0	
chr12	4968967	4969087	reg1038797.p2	3.390	+	NM_002235 X17622 TSC_hg19_v1_chr12_+_4918486	-50612	+	AJ271385 NM_017417 BC140888 BC140889	-139259	+	TSC_hg19_v1_chr12_+_4758272 NM_005002 BC015837 AF050641 AK308588 BC009311 AK291067 BC111546 L04490	-210749	+	TSC_hg19_v1_chr12_+_5019070 NM_000217	50033	+	M55513 NM_002234 BC096357 BC096358 BC099665 BC099666 M60451 M83254	184092	+	TSC_hg19_v1_chr12_+_5541277 AK293895 NM_001102654	572249	+	NM_002235|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##X17622|KCNA6|3742|potassium voltage-gated channel, shaker-related subfamily, member 6##AJ271385|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_017417|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140888|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##BC140889|GALNT8|26290|UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 8 (GalNAc-T8)##NM_005002|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC015837|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AF050641|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK308588|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC009311|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##AK291067|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##BC111546|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##L04490|NDUFA9|4704|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9, 39kDa##NM_000217|KCNA1|3736|potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia)##M55513|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##NM_002234|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096357|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC096358|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099665|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##BC099666|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M60451|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##M83254|KCNA5|3741|potassium voltage-gated channel, shaker-related subfamily, member 5##AK293895|NTF3|4908|neurotrophin 3##NM_001102654|NTF3|4908|neurotrophin 3	0.0	
chr14	50522623	50522728	reg1040284.p1	3.390	+	AK091232 AX746864 NM_001012706	-48438	-	TSC_hg19_v1_chr14_+_50360369 AF047432 AB463401 AF493885 BT019868 CR541939 CR541964	-162269	+	TSC_hg19_v1_chr14_+_50359832 BC002952 M57763	-162842	+	AF390030 NM_001014830	36685	-	AK129564 TSC_hg19_v1_chr14_-_50583291 BX247997 BC027585 AK023982 NM_001040662 NM_024558 BC105118 BC143673 BC143674	60595	-	TSC_hg19_v1_chr14_-_50697940 L13858 HQ258542 AB463275 BC117261 BC143366 BC143367	175308	-	AK091232|C14orf182|283551|chromosome 14 open reading frame 182##NM_001012706|C14orf182|283551|chromosome 14 open reading frame 182##AF047432|ARF6|382|ADP-ribosylation factor 6##AF493885|ARF6|382|ADP-ribosylation factor 6##BT019868|ARF6|382|ADP-ribosylation factor 6##CR541939|ARF6|382|ADP-ribosylation factor 6##CR541964|ARF6|382|ADP-ribosylation factor 6##BC002952|ARF6|382|ADP-ribosylation factor 6##M57763|ARF6|382|ADP-ribosylation factor 6##AF390030|C14orf183|196913|chromosome 14 open reading frame 183##NM_001014830|C14orf183|196913|chromosome 14 open reading frame 183##AK129564|METTL21D|79609|methyltransferase like 21D##BX247997|METTL21D|79609|methyltransferase like 21D##BC027585|METTL21D|79609|methyltransferase like 21D##AK023982|METTL21D|79609|methyltransferase like 21D##NM_001040662|METTL21D|79609|methyltransferase like 21D##NM_024558|METTL21D|79609|methyltransferase like 21D##BC105118|METTL21D|79609|methyltransferase like 21D##BC143673|METTL21D|79609|methyltransferase like 21D##BC143674|METTL21D|79609|methyltransferase like 21D##L13858|SOS2|6655|son of sevenless homolog 2 (Drosophila)##HQ258542|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC117261|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143366|SOS2|6655|son of sevenless homolog 2 (Drosophila)##BC143367|SOS2|6655|son of sevenless homolog 2 (Drosophila)	0.0	
chr14	74674803	74674880	reg1034599.p1	3.390	+	NM_001024674 AK307062 TSC_hg19_v1_chr14_+_74551662 AK055422 AK023979 BC009539	-123173	+	TSC_hg19_v1_chr14_-_74551167 BC032371 NM_005589	-123652	-	AF038011 TSC_hg19_v1_chr14_-_74551122 AF159889 CU678802 DQ892921 DQ893680 EU176729 AK223244 AJ249994 BC004909 AK222687 AF148505 AK312389 AK294243 AK311478	-123726	-	AY336059 NM_182894 BC128153	31355	+	BT007412 CR457104 DQ892847 DQ896094 BC012815 TSC_hg19_v1_chr14_-_74769638 AK291332 AK308382 AF009746 AK297934 BX247984 BX248053 NM_005050	94849	-	NM_018228 TSC_hg19_v1_chr14_+_74815173	140328	+	NM_001024674|LIN52|91750|lin-52 homolog (C. elegans)##AK307062|LIN52|91750|lin-52 homolog (C. elegans)##AK055422|LIN52|91750|lin-52 homolog (C. elegans)##AK023979|LIN52|91750|lin-52 homolog (C. elegans)##BC009539|LIN52|91750|lin-52 homolog (C. elegans)##BC032371|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##NM_005589|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AF038011|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AF159889|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##DQ892921|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##DQ893680|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##EU176729|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK223244|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AJ249994|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##BC004909|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK222687|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AF148505|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK312389|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK294243|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AK311478|ALDH6A1|4329|aldehyde dehydrogenase 6 family, member A1##AY336059|VSX2|338917|visual system homeobox 2##NM_182894|VSX2|338917|visual system homeobox 2##BC128153|VSX2|338917|visual system homeobox 2##BT007412|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##CR457104|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ892847|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##DQ896094|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BC012815|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK291332|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK308382|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AF009746|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##AK297934|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX247984|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##BX248053|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_005050|ABCD4|5826|ATP-binding cassette, sub-family D (ALD), member 4##NM_018228|VRTN|55237|vertebrae development homolog (pig)	0.10248	
chr17	40176868	40176954	reg1004383.p1	3.390	+	TSC_hg19_v1_chr17_+_40172124 AK027265 AK297975 AK054571 BC007316 BC007450	-4765	+	NM_001144927 NM_001144928 NM_001144929 NM_017595 TSC_hg19_v1_chr17_+_40172107	-4813	+	BX647209 NM_003315	-7219	-	NM_001242704	13132	-	BC014949 AK296840 AK300900 AK021416 AK225549 NM_024119	87807	-	TSC_hg19_v1_chr17_-_40273386 AB527835 AF029777 BC032743 BC105977 BC039907 NM_021078	96438	-	AK027265|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK297975|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##AK054571|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007316|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BC007450|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144927|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144928|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_001144929|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##NM_017595|NKIRAS2|28511|NFKB inhibitor interacting Ras-like 2##BX647209|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7##NM_003315|DNAJC7|7266|DnaJ (Hsp40) homolog, subfamily C, member 7##NM_001242704|ZNF385C|201181|zinc finger protein 385C##BC014949|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK296840|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK300900|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK021416|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AK225549|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##NM_024119|DHX58|79132|DEXH (Asp-Glu-X-His) box polypeptide 58##AF029777|KAT2A|2648|K(lysine) acetyltransferase 2A##BC032743|KAT2A|2648|K(lysine) acetyltransferase 2A##BC105977|KAT2A|2648|K(lysine) acetyltransferase 2A##BC039907|KAT2A|2648|K(lysine) acetyltransferase 2A##NM_021078|KAT2A|2648|K(lysine) acetyltransferase 2A	0.0	
chr2	127497025	127497122	reg1035667.p2	3.390	+	TSC_hg19_v1_chr2_+_127413752 BC016653 AB463694 M11802 M36284 X51973 M28335	-83281	+	BC106051 TSC_hg19_v1_chr2_+_127413722 NM_002101 NM_016815 BC104246 BC104247 X12496 AK312032	-83366	+	TSC_hg19_v1_chr2_+_124782863 AK056528 NM_130773	-2714209	+	TSC_hg19_v1_chr2_-_127864659 AF004015 AF043898 AF043899 AF043900 AF043901 AF411606 AM392950 BT006865 EU831833 AB587383 U87558 U68485 AF068914 AF068915 AF068916 AF068917 AF068918 BC004101 AK295300 AF001383 AL713697 NM_004305 NM_139343 NM_139344 NM_139345 NM_139346 NM_139347 NM_139348 NM_139349 NM_139350 NM_139351	367668	-	BC039307 NM_001001665	466269	-	AK131190 TSC_hg19_v1_chr2_-_127977781	480644	-	BC016653|GYPC|2995|glycophorin C (Gerbich blood group)##M11802|GYPC|2995|glycophorin C (Gerbich blood group)##M36284|GYPC|2995|glycophorin C (Gerbich blood group)##X51973|GYPC|2995|glycophorin C (Gerbich blood group)##M28335|GYPC|2995|glycophorin C (Gerbich blood group)##BC106051|GYPC|2995|glycophorin C (Gerbich blood group)##NM_002101|GYPC|2995|glycophorin C (Gerbich blood group)##NM_016815|GYPC|2995|glycophorin C (Gerbich blood group)##BC104246|GYPC|2995|glycophorin C (Gerbich blood group)##BC104247|GYPC|2995|glycophorin C (Gerbich blood group)##X12496|GYPC|2995|glycophorin C (Gerbich blood group)##AK312032|GYPC|2995|glycophorin C (Gerbich blood group)##AK056528|CNTNAP5|129684|contactin associated protein-like 5##NM_130773|CNTNAP5|129684|contactin associated protein-like 5##AF004015|BIN1|274|bridging integrator 1##AF043898|BIN1|274|bridging integrator 1##AF043899|BIN1|274|bridging integrator 1##AF043900|BIN1|274|bridging integrator 1##AF043901|BIN1|274|bridging integrator 1##AM392950|BIN1|274|bridging integrator 1##BT006865|BIN1|274|bridging integrator 1##EU831833|BIN1|274|bridging integrator 1##U87558|BIN1|274|bridging integrator 1##U68485|BIN1|274|bridging integrator 1##AF068914|BIN1|274|bridging integrator 1##AF068915|BIN1|274|bridging integrator 1##AF068916|BIN1|274|bridging integrator 1##AF068917|BIN1|274|bridging integrator 1##AF068918|BIN1|274|bridging integrator 1##BC004101|BIN1|274|bridging integrator 1##AK295300|BIN1|274|bridging integrator 1##AF001383|BIN1|274|bridging integrator 1##AL713697|BIN1|274|bridging integrator 1##NM_004305|BIN1|274|bridging integrator 1##NM_139343|BIN1|274|bridging integrator 1##NM_139344|BIN1|274|bridging integrator 1##NM_139345|BIN1|274|bridging integrator 1##NM_139346|BIN1|274|bridging integrator 1##NM_139347|BIN1|274|bridging integrator 1##NM_139348|BIN1|274|bridging integrator 1##NM_139349|BIN1|274|bridging integrator 1##NM_139350|BIN1|274|bridging integrator 1##NM_139351|BIN1|274|bridging integrator 1##BC039307|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##NM_001001665|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1##AK131190|CYP27C1|339761|cytochrome P450, family 27, subfamily C, polypeptide 1	0.0	
chr21	43729451	43729575	reg1001595.p2	3.390	+	TSC_hg19_v1_chr21_+_43710190 AF038175	-19300	+	AK298491 AF323664 NM_207174	-89545	+	TSC_hg19_v1_chr21_+_43639249 AK292152 BC029158 NM_004915 NM_016818 AF323663 EU832827 GQ129336 X91249 DQ891343 EU176570	-90220	+	L08044 DQ891963 DQ895153 L15203 BC017859 TSC_hg19_v1_chr21_-_43735520	5978	-	NM_003226 AF432265	6219	-	X51698 BC032820 NM_005423	41625	-	AF038175|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK298491|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323664|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_207174|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AK292152|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##BC029158|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_004915|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##NM_016818|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##AF323663|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU832827|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##GQ129336|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##X91249|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##DQ891343|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##EU176570|ABCG1|9619|ATP-binding cassette, sub-family G (WHITE), member 1##L08044|TFF3|7033|trefoil factor 3 (intestinal)##DQ891963|TFF3|7033|trefoil factor 3 (intestinal)##DQ895153|TFF3|7033|trefoil factor 3 (intestinal)##L15203|TFF3|7033|trefoil factor 3 (intestinal)##BC017859|TFF3|7033|trefoil factor 3 (intestinal)##NM_003226|TFF3|7033|trefoil factor 3 (intestinal)##AF432265|TFF3|7033|trefoil factor 3 (intestinal)##X51698|TFF2|7032|trefoil factor 2##BC032820|TFF2|7032|trefoil factor 2##NM_005423|TFF2|7032|trefoil factor 2	0.0	
chr5	120152863	120152943	reg1042964.p1	3.390	+	TSC_hg19_v1_chr5_+_119800010 AF242769 NM_016644	-352892	+	TSC_hg19_v1_chr5_+_119799994 BC092474	-352955	+	BC011941 TSC_hg19_v1_chr5_-_119740564	-412353	-	BC034419 NM_177478 HQ258558	1034750	+	AK058015 NM_152546 TSC_hg19_v1_chr5_+_121297676 BC031222 CU689120 AY611630	1144788	+	AK316309 AK307732 NM_001178102	1259958	-	AF242769|PRR16|51334|proline rich 16##NM_016644|PRR16|51334|proline rich 16##BC092474|PRR16|51334|proline rich 16##BC034419|FTMT|94033|ferritin mitochondrial##NM_177478|FTMT|94033|ferritin mitochondrial##HQ258558|FTMT|94033|ferritin mitochondrial##AK058015|SRFBP1|153443|serum response factor binding protein 1##NM_152546|SRFBP1|153443|serum response factor binding protein 1##BC031222|SRFBP1|153443|serum response factor binding protein 1##AY611630|SRFBP1|153443|serum response factor binding protein 1##AK316309|LOX|4015|lysyl oxidase##AK307732|LOX|4015|lysyl oxidase##NM_001178102|LOX|4015|lysyl oxidase	0.932074	CTCF.p2:0:0.932
chr5	43313143	43313235	reg1030978.p2	3.390	+	BC036422 NM_153361	-120863	+	AK057343 NM_003432 TSC_hg19_v1_chr5_+_43121669 AK310735 BC017923	-191505	+	TSC_hg19_v1_chr5_+_43121609 AK299315 AK307977	-191575	+	BC000297 BC082234 M15802 X66435 TSC_hg19_v1_chr5_-_43313515 AK095492 AK315593	342	-	TSC_hg19_v1_chr5_-_43313581 NM_001098272 NM_002130	407	-	TSC_hg19_v1_chr5_-_43397231 AK307307	84037	-	BC036422|NIM1|167359|serine/threonine-protein kinase NIM1##NM_153361|NIM1|167359|serine/threonine-protein kinase NIM1##AK057343|ZNF131|7690|zinc finger protein 131##NM_003432|ZNF131|7690|zinc finger protein 131##AK310735|ZNF131|7690|zinc finger protein 131##BC017923|ZNF131|7690|zinc finger protein 131##AK299315|ZNF131|7690|zinc finger protein 131##AK307977|ZNF131|7690|zinc finger protein 131##BC000297|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##BC082234|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##M15802|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##X66435|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK095492|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK315593|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##NM_001098272|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##NM_002130|HMGCS1|3157|3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)##AK307307|CCL28|56477|chemokine (C-C motif) ligand 28	0.010131	
chr5	79500872	79500983	reg1034722.p1	3.390	+	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-169763	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-213969	-	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-515255	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	50958	-	NM_032567 AK098575 AK314007 AF333098 BC033798	114888	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	202926	+	BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16	0.0	
chr6	118902020	118902110	reg1020926.p1	3.390	+	NM_002667 M63603 AK311799 BC005269	-32600	+	BC028615 NM_001029858 BC114925	-673375	+	TSC_hg19_v1_chr6_+_117996664 AK126335 BC013026	-905399	+	BC048977 BC052778 NM_001042475 NM_206921 BC036553	70971	-	BC110835 BC064835 NM_001178035	129168	-	NM_014034 AK025738 AL050261 BC010878 AB028628 AF279306 CU679835 CR457347	313343	+	NM_002667|PLN|5350|phospholamban##M63603|PLN|5350|phospholamban##AK311799|PLN|5350|phospholamban##BC005269|PLN|5350|phospholamban##BC028615|SLC35F1|222553|solute carrier family 35, member F1##NM_001029858|SLC35F1|222553|solute carrier family 35, member F1##BC114925|SLC35F1|222553|solute carrier family 35, member F1##AK126335|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC013026|NUS1|116150|nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)##BC048977|CEP85L|387119|centrosomal protein 85kDa-like##BC052778|CEP85L|387119|centrosomal protein 85kDa-like##NM_001042475|CEP85L|387119|centrosomal protein 85kDa-like##NM_206921|CEP85L|387119|centrosomal protein 85kDa-like##BC036553|CEP85L|387119|centrosomal protein 85kDa-like##BC110835|CEP85L|387119|centrosomal protein 85kDa-like##BC064835|CEP85L|387119|centrosomal protein 85kDa-like##NM_001178035|CEP85L|387119|centrosomal protein 85kDa-like##NM_014034|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AK025738|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AL050261|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##BC010878|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AB028628|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##AF279306|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)##CR457347|ASF1A|25842|ASF1 anti-silencing function 1 homolog A (S. cerevisiae)	0.0	
chr6	149102241	149102422	reg1038863.p1	3.390	+	TSC_hg19_v1_chr6_+_149068165 NM_005715	-34122	+	TSC_hg19_v1_chr6_+_148664143 AJ507735 AB463240 BC063279	-438140	+	TSC_hg19_v1_chr6_+_148663973 AB018333	-438341	+	TSC_hg19_v1_chr6_+_149639095 AB018276 BC035910	536772	+	AK315038 NM_015093 AK307650	537110	+	AY340238 NM_001002255 BC130305 HQ258040	619177	+	NM_005715|UST|10090|uronyl-2-sulfotransferase##AJ507735|SASH1|23328|SAM and SH3 domain containing 1##BC063279|SASH1|23328|SAM and SH3 domain containing 1##AB018333|SASH1|23328|SAM and SH3 domain containing 1##AB018276|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##BC035910|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK315038|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##NM_015093|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AK307650|TAB2|23118|TGF-beta activated kinase 1/MAP3K7 binding protein 2##AY340238|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##NM_001002255|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##BC130305|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)##HQ258040|SUMO4|387082|SMT3 suppressor of mif two 3 homolog 4 (S. cerevisiae)	0.0	
chr6	21264650	21264717	reg1031668.p2	3.390	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-729960	+	CR749285 NM_001243076	-860650	+	TSC_hg19_v1_chr6_+_20402109 BC099908 NM_001949	-862580	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	329689	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	401976	+	BC015850 NM_000948	1033046	-	AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##CR749285|E2F3|1871|E2F transcription factor 3##NM_001243076|E2F3|1871|E2F transcription factor 3##BC099908|E2F3|1871|E2F transcription factor 3##NM_001949|E2F3|1871|E2F transcription factor 3##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin	0.0	
chr6_mann_hap4	4517422	4517515	reg1036536.p1	3.390	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.913401	CTCF.p2:17:0.913
chr8	128569330	128569478	reg1037941.p1	3.390	+	DQ486513 NM_001159542	-141548	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-998680	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-998849	-	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	178921	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	179086	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	237379	+	DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)	0.0	
chrX	148569038	148569157	reg1038775.p1	3.390	+	TSC_hg19_v1_chrX_+_147800613 AK301927 NM_001170628	-768485	+	TSC_hg19_v1_chrX_+_147582146 NM_001169122 NM_001169123 NM_001169124 NM_001169125 NM_002025 U48436 L76569	-986909	+	BC034320 NM_152578 AY211917 AK098602	-1506242	+	CU675281 AF050145 BC006170 TSC_hg19_v1_chrX_-_148586837 BX647357 L40586 M58342 AK294541 NM_000202 NM_001166550 NM_006123	17677	-	AK303548 AK310957 TSC_hg19_v1_chrX_-_148622461 AK310119	53333	-	NM_001171907 NM_001171908 NM_178124 U66049 AK294153 AY074889 AK291899 BC065539 BC104930 BC104932 BC143660 BC143661 BC143662	53497	+	AK301927|AFF2|2334|AF4/FMR2 family, member 2##NM_001170628|AFF2|2334|AF4/FMR2 family, member 2##NM_001169122|AFF2|2334|AF4/FMR2 family, member 2##NM_001169123|AFF2|2334|AF4/FMR2 family, member 2##NM_001169124|AFF2|2334|AF4/FMR2 family, member 2##NM_001169125|AFF2|2334|AF4/FMR2 family, member 2##NM_002025|AFF2|2334|AF4/FMR2 family, member 2##U48436|AFF2|2334|AF4/FMR2 family, member 2##L76569|AFF2|2334|AF4/FMR2 family, member 2##BC034320|FMR1NB|158521|fragile X mental retardation 1 neighbor##NM_152578|FMR1NB|158521|fragile X mental retardation 1 neighbor##AY211917|FMR1NB|158521|fragile X mental retardation 1 neighbor##AK098602|FMR1NB|158521|fragile X mental retardation 1 neighbor##AF050145|IDS|3423|iduronate 2-sulfatase##BC006170|IDS|3423|iduronate 2-sulfatase##BX647357|IDS|3423|iduronate 2-sulfatase##L40586|IDS|3423|iduronate 2-sulfatase##M58342|IDS|3423|iduronate 2-sulfatase##AK294541|IDS|3423|iduronate 2-sulfatase##NM_000202|IDS|3423|iduronate 2-sulfatase##NM_001166550|IDS|3423|iduronate 2-sulfatase##NM_006123|IDS|3423|iduronate 2-sulfatase##AK303548|LOC100131434|100131434|uncharacterized LOC100131434##AK310957|LOC100131434|100131434|uncharacterized LOC100131434##AK310119|LOC100131434|100131434|uncharacterized LOC100131434##NM_001171907|CXorf40A|91966|chromosome X open reading frame 40A##NM_001171908|CXorf40A|91966|chromosome X open reading frame 40A##NM_178124|CXorf40A|91966|chromosome X open reading frame 40A##U66049|CXorf40A|91966|chromosome X open reading frame 40A##AK294153|CXorf40A|91966|chromosome X open reading frame 40A##AY074889|CXorf40A|91966|chromosome X open reading frame 40A##AK291899|CXorf40A|91966|chromosome X open reading frame 40A##BC065539|CXorf40A|91966|chromosome X open reading frame 40A##BC104930|CXorf40A|91966|chromosome X open reading frame 40A##BC104932|CXorf40A|91966|chromosome X open reading frame 40A##BC143660|CXorf40A|91966|chromosome X open reading frame 40A##BC143661|CXorf40A|91966|chromosome X open reading frame 40A##BC143662|CXorf40A|91966|chromosome X open reading frame 40A	0.0	
chrX	65628306	65628387	reg1020978.p1	3.390	+	NM_001130860 AK311043 AB014598 NM_014799 AY358990 AK307761	-244204	+	TSC_hg19_v1_chrX_+_65382627 BC011561	-245702	+	NM_138737 TSC_hg19_v1_chrX_+_65382512	-245871	+	AX775690 AX775692 AF298812 AX775694 AY152724 CU689984 AB528008 AY358735 AY358736 NM_001242310	207512	-	BC034919 AK296264 AK299018 NM_021783	230540	-	AK314881 NM_001199687	230777	-	NM_001130860|HEPH|9843|hephaestin##AK311043|HEPH|9843|hephaestin##AB014598|HEPH|9843|hephaestin##NM_014799|HEPH|9843|hephaestin##AY358990|HEPH|9843|hephaestin##AK307761|HEPH|9843|hephaestin##BC011561|HEPH|9843|hephaestin##NM_138737|HEPH|9843|hephaestin##AF298812|EDA2R|60401|ectodysplasin A2 receptor##AY152724|EDA2R|60401|ectodysplasin A2 receptor##AY358735|EDA2R|60401|ectodysplasin A2 receptor##AY358736|EDA2R|60401|ectodysplasin A2 receptor##NM_001242310|EDA2R|60401|ectodysplasin A2 receptor##BC034919|EDA2R|60401|ectodysplasin A2 receptor##AK296264|EDA2R|60401|ectodysplasin A2 receptor##AK299018|EDA2R|60401|ectodysplasin A2 receptor##NM_021783|EDA2R|60401|ectodysplasin A2 receptor##AK314881|EDA2R|60401|ectodysplasin A2 receptor##NM_001199687|EDA2R|60401|ectodysplasin A2 receptor	0.01502	
chr11	2187490	2187571	reg1037734.p2	3.389	+	AY899304 X70508 BC005255 DQ104204 DQ104205 NM_000207 NM_001042376 NM_001185097 NM_001185098	-5107	-	TSC_hg19_v1_chr11_-_2170792 DQ104203 NM_001007139	-16718	-	NM_001127598 TSC_hg19_v1_chr11_-_2162493	-25069	-	M20911 M20912 AB591012 DQ677336 DQ677337 M17589 Y00414 M24790 NM_000360 NM_199292 NM_199293 X05290 BC143611 BC104967 BC143614	5530	-	TSC_hg19_v1_chr11_-_2291819 BC057801 BC136561 BC136567	104327	-	BC028140 NM_005170 TSC_hg19_v1_chr11_-_2292209	104665	-	AY899304|INS|3630|insulin##X70508|INS|3630|insulin##BC005255|INS|3630|insulin##DQ104204|INS-IGF2|723961|INS-IGF2 readthrough##DQ104205|INS-IGF2|723961|INS-IGF2 readthrough##NM_000207|INS|3630|insulin##NM_001042376|INS-IGF2|723961|INS-IGF2 readthrough##NM_001185097|INS|3630|insulin##NM_001185098|INS|3630|insulin##DQ104203|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##NM_001007139|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##NM_001127598|IGF2|3481|insulin-like growth factor 2 (somatomedin A)##M20911|TH|7054|tyrosine hydroxylase##M20912|TH|7054|tyrosine hydroxylase##DQ677336|TH|7054|tyrosine hydroxylase##DQ677337|TH|7054|tyrosine hydroxylase##M17589|TH|7054|tyrosine hydroxylase##Y00414|TH|7054|tyrosine hydroxylase##M24790|TH|7054|tyrosine hydroxylase##NM_000360|TH|7054|tyrosine hydroxylase##NM_199292|TH|7054|tyrosine hydroxylase##NM_199293|TH|7054|tyrosine hydroxylase##X05290|TH|7054|tyrosine hydroxylase##BC143611|TH|7054|tyrosine hydroxylase##BC104967|TH|7054|tyrosine hydroxylase##BC143614|TH|7054|tyrosine hydroxylase##BC057801|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136561|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC136567|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##BC028140|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)##NM_005170|ASCL2|430|achaete-scute complex homolog 2 (Drosophila)	0.997814	CTCF.p2:-13:0.998
chr11	86666796	86666878	reg1026087.p1	3.389	+	BC025750 TSC_hg19_v1_chr11_-_86666438 AB054881 BC114527 BC114622 AB032417 AK292768 NM_012193	-449	-	TSC_hg19_v1_chr11_-_86666094 AY462097	-730	-	NM_007173 TSC_hg19_v1_chr11_+_86511583 AK316508 AK075362 AK315562 AK304301 AK304054 BC063022 AL136914 BC001278 AF015287 AF193611 AY359033	-155285	+	TSC_hg19_v1_chr11_+_86749074 NM_001168724 NM_022918 AK296774 BX648678 AK291804 AK000684 BC030952 BC051462 AK302473 CU689044	82141	+	AK024853 TSC_hg19_v1_chr11_+_87032449	365605	+	BT009842 DQ894305 DQ891126 AF136172 AF235022 BC015808 NM_022337	1241755	-	BC025750|FZD4|8322|frizzled family receptor 4##AB054881|FZD4|8322|frizzled family receptor 4##BC114527|FZD4|8322|frizzled family receptor 4##BC114622|FZD4|8322|frizzled family receptor 4##AB032417|FZD4|8322|frizzled family receptor 4##AK292768|FZD4|8322|frizzled family receptor 4##NM_012193|FZD4|8322|frizzled family receptor 4##AY462097|FZD4|8322|frizzled family receptor 4##NM_007173|PRSS23|11098|protease, serine, 23##AK075362|PRSS23|11098|protease, serine, 23##AK315562|PRSS23|11098|protease, serine, 23##AK304301|PRSS23|11098|protease, serine, 23##AK304054|PRSS23|11098|protease, serine, 23##AL136914|PRSS23|11098|protease, serine, 23##BC001278|PRSS23|11098|protease, serine, 23##AF015287|PRSS23|11098|protease, serine, 23##AF193611|PRSS23|11098|protease, serine, 23##AY359033|PRSS23|11098|protease, serine, 23##NM_001168724|TMEM135|65084|transmembrane protein 135##NM_022918|TMEM135|65084|transmembrane protein 135##AK296774|TMEM135|65084|transmembrane protein 135##BX648678|TMEM135|65084|transmembrane protein 135##AK291804|TMEM135|65084|transmembrane protein 135##AK000684|TMEM135|65084|transmembrane protein 135##BC030952|TMEM135|65084|transmembrane protein 135##BC051462|TMEM135|65084|transmembrane protein 135##AK302473|TMEM135|65084|transmembrane protein 135##AK024853|TMEM135|65084|transmembrane protein 135##BT009842|RAB38|23682|RAB38, member RAS oncogene family##DQ894305|RAB38|23682|RAB38, member RAS oncogene family##DQ891126|RAB38|23682|RAB38, member RAS oncogene family##AF136172|RAB38|23682|RAB38, member RAS oncogene family##AF235022|RAB38|23682|RAB38, member RAS oncogene family##BC015808|RAB38|23682|RAB38, member RAS oncogene family##NM_022337|RAB38|23682|RAB38, member RAS oncogene family	0.0	
chr1	19278681	19278786	reg1035333.p2	3.389	+	AB587364 DQ893505 DQ896489 TSC_hg19_v1_chr1_-_19229045 FJ462711 BC007581 BC023600 AK222486 U24266 U24267 AK289972 NM_003748 NM_170726	-49579	-	AK294552 NM_001161504	-61349	-	NM_152232 AB527225	-92578	-	TSC_hg19_v1_chr1_-_19282773 NM_001136265	4066	-	AF348492 NM_020765 TSC_hg19_v1_chr1_-_19536751 BC041137	258013	-	TSC_hg19_v1_chr1_-_19578013 D42044 AB384435 CU689920 BX648708	299259	-	DQ893505|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##DQ896489|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##FJ462711|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC007581|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##BC023600|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK222486|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24266|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##U24267|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK289972|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_003748|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_170726|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##AK294552|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_001161504|ALDH4A1|8659|aldehyde dehydrogenase 4 family, member A1##NM_152232|TAS1R2|80834|taste receptor, type 1, member 2##NM_001136265|IFFO2|126917|intermediate filament family orphan 2##AF348492|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##NM_020765|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##BC041137|UBR4|23352|ubiquitin protein ligase E3 component n-recognin 4##D42044|KIAA0090|23065|KIAA0090##BX648708|KIAA0090|23065|KIAA0090	0.0	
chr12	1654306	1654411	reg1036742.p1	3.389	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-553906	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-595532	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-637276	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	48993	-	AY009399 NM_030775	71863	+	BC001749 NM_032642	84053	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.042958	
chr1	32803826	32803958	reg1040292.p1	3.389	+	TSC_hg19_v1_chr1_-_32801835 AB528178 CU688192 AM393505 DQ893237 DQ896567 X70326 AL713653 AY007131 BC007904 BC066915 NM_023009	-2161	-	TSC_hg19_v1_chr1_+_32757740 BC000301 AK299792 AY627042 AB451297 AB451430 AB463736 CR541717 CU674144 DQ891398 DQ894577	-46152	+	D50405 NM_004964 TSC_hg19_v1_chr1_+_32757707	-46184	+	BC035354 NM_052841	23937	+	NM_001167676	23951	-	CR457252 TSC_hg19_v1_chr1_-_32860030 BC010573 CR749228 BX641056 AK300231 BC026322 AK297604 AK300306 AK001138 AK225717 AK293454 BC028381 AK021440 AK297352 AK225026 AK304477 AK316172 NM_001143888 NM_001143889 NM_001143890 NM_018045	56145	-	AM393505|MARCKSL1|65108|MARCKS-like 1##DQ893237|MARCKSL1|65108|MARCKS-like 1##DQ896567|MARCKSL1|65108|MARCKS-like 1##X70326|MARCKSL1|65108|MARCKS-like 1##AL713653|MARCKSL1|65108|MARCKS-like 1##AY007131|MARCKSL1|65108|MARCKS-like 1##BC007904|MARCKSL1|65108|MARCKS-like 1##BC066915|MARCKSL1|65108|MARCKS-like 1##NM_023009|MARCKSL1|65108|MARCKS-like 1##BC000301|HDAC1|3065|histone deacetylase 1##AK299792|HDAC1|3065|histone deacetylase 1##AY627042|HDAC1|3065|histone deacetylase 1##AB451297|HDAC1|3065|histone deacetylase 1##AB451430|HDAC1|3065|histone deacetylase 1##CR541717|HDAC1|3065|histone deacetylase 1##DQ891398|HDAC1|3065|histone deacetylase 1##DQ894577|HDAC1|3065|histone deacetylase 1##D50405|HDAC1|3065|histone deacetylase 1##NM_004964|HDAC1|3065|histone deacetylase 1##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071##CR457252|BSDC1|55108|BSD domain containing 1##BC010573|BSDC1|55108|BSD domain containing 1##CR749228|BSDC1|55108|BSD domain containing 1##BX641056|BSDC1|55108|BSD domain containing 1##AK300231|BSDC1|55108|BSD domain containing 1##BC026322|BSDC1|55108|BSD domain containing 1##AK297604|BSDC1|55108|BSD domain containing 1##AK300306|BSDC1|55108|BSD domain containing 1##AK001138|BSDC1|55108|BSD domain containing 1##AK225717|BSDC1|55108|BSD domain containing 1##AK293454|BSDC1|55108|BSD domain containing 1##BC028381|BSDC1|55108|BSD domain containing 1##AK021440|BSDC1|55108|BSD domain containing 1##AK297352|BSDC1|55108|BSD domain containing 1##AK225026|BSDC1|55108|BSD domain containing 1##AK304477|BSDC1|55108|BSD domain containing 1##AK316172|BSDC1|55108|BSD domain containing 1##NM_001143888|BSDC1|55108|BSD domain containing 1##NM_001143889|BSDC1|55108|BSD domain containing 1##NM_001143890|BSDC1|55108|BSD domain containing 1##NM_018045|BSDC1|55108|BSD domain containing 1	0.0	
chr14	66299663	66299775	reg1042897.p1	3.389	+	TSC_hg19_v1_chr14_+_65879739 BC025385	-419994	+	TSC_hg19_v1_chr14_+_65879525 Y17978 Y17979	-420231	+	BC028147 AK094893 BC045750 TSC_hg19_v1_chr14_-_65879341 BX161387	-420393	-	AB037806 AF272663 NM_001024218 NM_020806	674405	+	TSC_hg19_v1_chr14_+_66974859 AK025169	675134	+	TSC_hg19_v1_chr14_+_66974870 AK315569	675150	+	BC025385|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17978|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##Y17979|FUT8|2530|fucosyltransferase 8 (alpha (1,6) fucosyltransferase)##BC028147|LOC645431|645431|uncharacterized LOC645431##AK094893|LOC645431|645431|uncharacterized LOC645431##BC045750|LOC645431|645431|uncharacterized LOC645431##BX161387|LOC645431|645431|uncharacterized LOC645431##AB037806|GPHN|10243|gephyrin##AF272663|GPHN|10243|gephyrin##NM_001024218|GPHN|10243|gephyrin##NM_020806|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin	0.907118	CTCF.p2:0:0.907
chr15	63890307	63890439	reg1035270.p2	3.389	+	NM_203373 AK096945 BC065833 AM392805 AM393002 AM393163 AM393334 AM393873 AB587479	-794	+	AK301236 TSC_hg19_v1_chr15_+_63796833 BC065300 NM_006537 AY461579 BC100029 AF073344 BC107137 BC107138 AK300948 AK301563 BC018113 BX647760 AB384940 DQ891025 DQ894205 BT007269 AK307810	-93496	+	TSC_hg19_v1_chr15_+_63796791 AK314223	-93591	+	BC017581 BC036918 AK093077 TSC_hg19_v1_chr15_-_63893135	2669	-	TSC_hg19_v1_chr15_-_64126081 U50078	235711	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	235747	-	NM_203373|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK096945|FBXL22|283807|F-box and leucine-rich repeat protein 22##BC065833|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM392805|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393002|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393163|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393334|FBXL22|283807|F-box and leucine-rich repeat protein 22##AM393873|FBXL22|283807|F-box and leucine-rich repeat protein 22##AK301236|USP3|9960|ubiquitin specific peptidase 3##BC065300|USP3|9960|ubiquitin specific peptidase 3##NM_006537|USP3|9960|ubiquitin specific peptidase 3##AY461579|USP3|9960|ubiquitin specific peptidase 3##BC100029|USP3|9960|ubiquitin specific peptidase 3##AF073344|USP3|9960|ubiquitin specific peptidase 3##BC107137|USP3|9960|ubiquitin specific peptidase 3##BC107138|USP3|9960|ubiquitin specific peptidase 3##AK300948|USP3|9960|ubiquitin specific peptidase 3##AK301563|USP3|9960|ubiquitin specific peptidase 3##BC018113|USP3|9960|ubiquitin specific peptidase 3##BX647760|USP3|9960|ubiquitin specific peptidase 3##DQ891025|USP3|9960|ubiquitin specific peptidase 3##DQ894205|USP3|9960|ubiquitin specific peptidase 3##BT007269|USP3|9960|ubiquitin specific peptidase 3##AK307810|USP3|9960|ubiquitin specific peptidase 3##AK314223|USP3|9960|ubiquitin specific peptidase 3##BC017581|LOC100130855|100130855|uncharacterized LOC100130855##BC036918|LOC100130855|100130855|uncharacterized LOC100130855##AK093077|LOC100130855|100130855|uncharacterized LOC100130855##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	0.0	
chr17	27893272	27893391	reg1030589.p2	3.389	+	NM_020791 NM_025142 BC133039 BC144067	-175386	+	TSC_hg19_v1_chr17_-_27621167 AK293075 NM_020772	-272166	-	AB385448 AJ493465 BC129989 BC129990 BC108307 AK297732 TSC_hg19_v1_chr17_-_27621134 AB037742 AY232289	-272221	-	TSC_hg19_v1_chr17_-_27893539 AK056717	213	-	TSC_hg19_v1_chr17_-_27894056 BC012476 NM_198147 AY358212	693	-	TSC_hg19_v1_chr17_+_27895730 AB110209 AK075341	2376	+	NM_020791|TAOK1|57551|TAO kinase 1##NM_025142|TAOK1|57551|TAO kinase 1##BC133039|TAOK1|57551|TAO kinase 1##BC144067|TAOK1|57551|TAO kinase 1##AK293075|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##NM_020772|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AJ493465|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129989|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC129990|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##BC108307|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK297732|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AB037742|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AY232289|NUFIP2|57532|nuclear fragile X mental retardation protein interacting protein 2##AK056717|ABHD15|116236|abhydrolase domain containing 15##BC012476|ABHD15|116236|abhydrolase domain containing 15##NM_198147|ABHD15|116236|abhydrolase domain containing 15##AY358212|ABHD15|116236|abhydrolase domain containing 15##AB110209|TP53I13|90313|tumor protein p53 inducible protein 13##AK075341|TP53I13|90313|tumor protein p53 inducible protein 13	0.422808	CTCF.p2:6:0.410
chr5	141736669	141736850	reg1036346.p1	3.389	+	TSC_hg19_v1_chr5_-_141704587 AK096464 NM_001127496 NM_030964	-32125	-	BC125095 BC125096 TSC_hg19_v1_chr5_-_141704555 AF227516 AF227517	-32239	-	TSC_hg19_v1_chr5_+_141488389 AB097010 AB097037 BC004317	-248349	+	S67291 S67292 S67294 AB528663 X65778 X65779 M13361 NM_033137 X51943	256949	-	L01487 BC032697 NM_001144892	264143	-	M60516 NM_000800	328860	-	AK096464|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_001127496|SPRY4|81848|sprouty homolog 4 (Drosophila)##NM_030964|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125095|SPRY4|81848|sprouty homolog 4 (Drosophila)##BC125096|SPRY4|81848|sprouty homolog 4 (Drosophila)##AF227516|SPRY4|81848|sprouty homolog 4 (Drosophila)##AB097010|NDFIP1|80762|Nedd4 family interacting protein 1##AB097037|NDFIP1|80762|Nedd4 family interacting protein 1##BC004317|NDFIP1|80762|Nedd4 family interacting protein 1##S67291|FGF1|2246|fibroblast growth factor 1 (acidic)##S67292|FGF1|2246|fibroblast growth factor 1 (acidic)##S67294|FGF1|2246|fibroblast growth factor 1 (acidic)##X65778|FGF1|2246|fibroblast growth factor 1 (acidic)##X65779|FGF1|2246|fibroblast growth factor 1 (acidic)##M13361|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_033137|FGF1|2246|fibroblast growth factor 1 (acidic)##X51943|FGF1|2246|fibroblast growth factor 1 (acidic)##L01487|FGF1|2246|fibroblast growth factor 1 (acidic)##BC032697|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_001144892|FGF1|2246|fibroblast growth factor 1 (acidic)##M60516|FGF1|2246|fibroblast growth factor 1 (acidic)##NM_000800|FGF1|2246|fibroblast growth factor 1 (acidic)	0.0	
chr10	1020306	1020395	reg1041659.p2	3.388	+	BC131630 BC152443 D86971 NM_015155	-88653	-	TSC_hg19_v1_chr10_-_735609 AB023151 BC063313 NM_014974	-284659	-	AK096000 BC144473 AK296168 TSC_hg19_v1_chr10_+_696010 AK096013	-324399	+	TSC_hg19_v1_chr10_-_1034270 AK126769	13919	-	AK130873 TSC_hg19_v1_chr10_-_1034282	13949	-	TSC_hg19_v1_chr10_+_1034348 AK001552 NM_012341	13991	+	BC131630|LARP4B|23185|La ribonucleoprotein domain family, member 4B##BC152443|LARP4B|23185|La ribonucleoprotein domain family, member 4B##D86971|LARP4B|23185|La ribonucleoprotein domain family, member 4B##NM_015155|LARP4B|23185|La ribonucleoprotein domain family, member 4B##AB023151|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##BC063313|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##NM_014974|DIP2C|22982|DIP2 disco-interacting protein 2 homolog C (Drosophila)##AK096000|C10orf108|414235|chromosome 10 open reading frame 108##AK296168|C10orf108|414235|chromosome 10 open reading frame 108##AK096013|C10orf108|414235|chromosome 10 open reading frame 108##AK130873|LOC100288619|100288619|uncharacterized LOC100288619##AK001552|GTPBP4|23560|GTP binding protein 4##NM_012341|GTPBP4|23560|GTP binding protein 4	0.0	
chr10	91149037	91149124	reg1011221.p1	3.388	+	BX647300 NM_001010987 BC150189 BC137368 BC137369	-11253	+	BC040833 AK091558 TSC_hg19_v1_chr10_-_91102477	-46625	-	NM_001031683 AK297137 AF026939 BC001383 BC004977	-56797	+	NM_001548 BC007091 AK314588 AK308688 X03557	3283	+	TSC_hg19_v1_chr10_+_91174324 NM_012420 BC025786	25263	+	U34605 TSC_hg19_v1_chr10_+_91174502 AK312358 AK293346	25408	+	BX647300|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##NM_001010987|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC150189|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC137368|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##BC137369|IFIT1B|439996|interferon-induced protein with tetratricopeptide repeats 1B##AK091558|LIPA|3988|lipase A, lysosomal acid, cholesterol esterase##NM_001031683|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AK297137|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##AF026939|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC001383|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##BC004977|IFIT3|3437|interferon-induced protein with tetratricopeptide repeats 3##NM_001548|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##BC007091|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK314588|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##AK308688|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##X03557|IFIT1|3434|interferon-induced protein with tetratricopeptide repeats 1##NM_012420|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##BC025786|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##U34605|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK312358|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5##AK293346|IFIT5|24138|interferon-induced protein with tetratricopeptide repeats 5	0.0	
chr11	2924101	2924181	reg1034592.p2	3.388	+	TSC_hg19_v1_chr11_+_2923559 AF030302	-537	+	TSC_hg19_v1_chr11_+_2923528 AB012083 AF028738 AF059663 AF070479 AF037064	-605	+	TSC_hg19_v1_chr11_+_2923507 NM_002555	-639	+	TSC_hg19_v1_chr11_+_2924568 CU677351 EU176788	402	+	NM_007105	1033	-	CR407664 AB464031 CU674965 AF019953 TSC_hg19_v1_chr11_-_2950651 BC005034 AF001294 AF035444 AK223027 NM_003311	26484	-	AF030302|SLC22A18|5002|solute carrier family 22, member 18##AB012083|SLC22A18|5002|solute carrier family 22, member 18##AF028738|SLC22A18|5002|solute carrier family 22, member 18##AF059663|SLC22A18|5002|solute carrier family 22, member 18##AF070479|SLC22A18|5002|solute carrier family 22, member 18##AF037064|SLC22A18|5002|solute carrier family 22, member 18##NM_002555|SLC22A18|5002|solute carrier family 22, member 18##EU176788|SLC22A18|5002|solute carrier family 22, member 18##NM_007105|SLC22A18AS|5003|solute carrier family 22 (organic cation transporter), member 18 antisense##CR407664|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AF019953|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##BC005034|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AF001294|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AF035444|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##AK223027|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2##NM_003311|PHLDA2|7262|pleckstrin homology-like domain, family A, member 2	0.0	
chr1	25573841	25573950	reg1040197.p2	3.388	+	CU679829 DQ890663 EU176475 TSC_hg19_v1_chr1_-_25558994 AF273089 AL080166 BC010862 AK303582 AK314859 BC015824 NM_015484 NM_207170	-14908	-	BC013362 AK310945 NM_001031680 AF022726	-282353	-	TSC_hg19_v1_chr1_-_25256768 AJ001432 NM_004350	-317109	-	BC065040 TSC_hg19_v1_chr1_-_25573922	28	-	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	78	-	AK297151 NM_001127691 NM_016124 X63094 BC139922 AF510069 AF510070 AF312679 Z97026 DQ451878 X63097 AB018966 AB018967 AB018968 AB018969 AB037270 AB046420 AB049754 AF037626 AF177938 AF187846 AJ704215 AM183924 AY449381 AY449382 AY449383 AY449384 AY449385 AY751491 AY751492 AY751493 AY751494 AY751495 AY751496 FR745438 FR745439 FR745440 FR745441 JF436967 L08429 S57971 S70174 S73913 S78509 S82449 EU557240 EU557241 EU661905 EU661906	25097	+	DQ890663|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##EU176475|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AF273089|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AL080166|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC010862|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK303582|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##AK314859|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC015824|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_015484|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##NM_207170|SYF2|25949|SYF2 homolog, RNA splicing factor (S. cerevisiae)##BC013362|RUNX3|864|runt-related transcription factor 3##AK310945|RUNX3|864|runt-related transcription factor 3##NM_001031680|RUNX3|864|runt-related transcription factor 3##AF022726|RUNX3|864|runt-related transcription factor 3##AJ001432|RUNX3|864|runt-related transcription factor 3##NM_004350|RUNX3|864|runt-related transcription factor 3##BC065040|C1orf63|57035|chromosome 1 open reading frame 63##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63##AK297151|RHD|6007|Rh blood group, D antigen##NM_001127691|RHD|6007|Rh blood group, D antigen##NM_016124|RHD|6007|Rh blood group, D antigen##X63094|RHD|6007|Rh blood group, D antigen##BC139922|RHD|6007|Rh blood group, D antigen##AF510069|RHD|6007|Rh blood group, D antigen##AF510070|RHD|6007|Rh blood group, D antigen##AF312679|RHD|6007|Rh blood group, D antigen##Z97026|RHD|6007|Rh blood group, D antigen##DQ451878|RHD|6007|Rh blood group, D antigen##X63097|RHD|6007|Rh blood group, D antigen##AB018966|RHD|6007|Rh blood group, D antigen##AB018967|RHD|6007|Rh blood group, D antigen##AB018968|RHD|6007|Rh blood group, D antigen##AB018969|RHD|6007|Rh blood group, D antigen##AB037270|RHD|6007|Rh blood group, D antigen##AB046420|RHD|6007|Rh blood group, D antigen##AB049754|RHD|6007|Rh blood group, D antigen##AF037626|RHD|6007|Rh blood group, D antigen##AF177938|RHD|6007|Rh blood group, D antigen##AF187846|RHD|6007|Rh blood group, D antigen##AJ704215|RHD|6007|Rh blood group, D antigen##AM183924|RHD|6007|Rh blood group, D antigen##AY449381|RHD|6007|Rh blood group, D antigen##AY449382|RHD|6007|Rh blood group, D antigen##AY449383|RHD|6007|Rh blood group, D antigen##AY449384|RHD|6007|Rh blood group, D antigen##AY449385|RHD|6007|Rh blood group, D antigen##AY751491|RHD|6007|Rh blood group, D antigen##AY751492|RHD|6007|Rh blood group, D antigen##AY751493|RHD|6007|Rh blood group, D antigen##AY751494|RHD|6007|Rh blood group, D antigen##AY751495|RHD|6007|Rh blood group, D antigen##AY751496|RHD|6007|Rh blood group, D antigen##FR745438|RHD|6007|Rh blood group, D antigen##FR745439|RHD|6007|Rh blood group, D antigen##FR745440|RHD|6007|Rh blood group, D antigen##FR745441|RHD|6007|Rh blood group, D antigen##L08429|RHD|6007|Rh blood group, D antigen##S57971|RHD|6007|Rh blood group, D antigen##S70174|RHD|6007|Rh blood group, D antigen##S73913|RHD|6007|Rh blood group, D antigen##S78509|RHD|6007|Rh blood group, D antigen##S82449|RHD|6007|Rh blood group, D antigen##EU557240|RHD|6007|Rh blood group, D antigen##EU557241|RHD|6007|Rh blood group, D antigen##EU661905|RHD|6007|Rh blood group, D antigen##EU661906|RHD|6007|Rh blood group, D antigen	0.0	
chr14	93570089	93570169	reg1035204.p1	3.388	+	TSC_hg19_v1_chr14_+_93389494 AK313757 AK223381 BC006459 BX248263 J03483 BC001059 J03915 DQ891820 DQ895007 CU674536 BT006869	-180532	+	NM_001275 TSC_hg19_v1_chr14_+_93389444	-180685	+	TSC_hg19_v1_chr14_+_93260649 NM_005113 BC023021 AK303789 AK293077 BC010134 AF085199	-309443	+	CU678540 DQ891434 DQ894609 AF279372 TSC_hg19_v1_chr14_-_93581625 BC037305 AK293515	11462	-	TSC_hg19_v1_chr14_-_93582271 BC018192 BC003622 BC007428 U51336 NM_001142593 NM_001142594 NM_014216	12085	-	BC015044 TSC_hg19_v1_chr14_-_93651193 AK024029	81071	-	AK313757|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##AK223381|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC006459|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BX248263|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03483|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BC001059|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##J03915|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ891820|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##DQ895007|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##BT006869|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_001275|CHGA|1113|chromogranin A (parathyroid secretory protein 1)##NM_005113|GOLGA5|9950|golgin A5##BC023021|GOLGA5|9950|golgin A5##AK303789|GOLGA5|9950|golgin A5##AK293077|GOLGA5|9950|golgin A5##BC010134|GOLGA5|9950|golgin A5##AF085199|GOLGA5|9950|golgin A5##DQ891434|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##DQ894609|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AF279372|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC037305|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##AK293515|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC018192|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC003622|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC007428|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##U51336|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142593|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_001142594|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##NM_014216|ITPK1|3705|inositol-tetrakisphosphate 1-kinase##BC015044|MOAP1|64112|modulator of apoptosis 1##AK024029|MOAP1|64112|modulator of apoptosis 1	0.025423	
chr1	52035044	52035157	reg1043509.p1	3.388	+	NM_001981 Z29064 TSC_hg19_v1_chr1_-_51985031	-50076	-	DQ367924 AB384758 BC054006 TSC_hg19_v1_chr1_-_51984939 AK129853 U07707 AK313396	-50177	-	AK090936 AX746691 AK308128 BX647676 NM_001159969	-147334	-	NM_024586 NM_148906 NM_148908 NM_148909	47445	+	TSC_hg19_v1_chr1_+_52082763 AK056617 AK091703 AK027535 AF392445 AY178997	47667	+	TSC_hg19_v1_chr1_+_52195487 NM_148904 NM_148905 NM_148907 AK315167	160377	+	NM_001981|EPS15|2060|epidermal growth factor receptor pathway substrate 15##Z29064|EPS15|2060|epidermal growth factor receptor pathway substrate 15##DQ367924|EPS15|2060|epidermal growth factor receptor pathway substrate 15##BC054006|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK129853|EPS15|2060|epidermal growth factor receptor pathway substrate 15##U07707|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK313396|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK090936|EPS15|2060|epidermal growth factor receptor pathway substrate 15##AK308128|EPS15|2060|epidermal growth factor receptor pathway substrate 15##BX647676|EPS15|2060|epidermal growth factor receptor pathway substrate 15##NM_001159969|EPS15|2060|epidermal growth factor receptor pathway substrate 15##NM_024586|OSBPL9|114883|oxysterol binding protein-like 9##NM_148906|OSBPL9|114883|oxysterol binding protein-like 9##NM_148908|OSBPL9|114883|oxysterol binding protein-like 9##NM_148909|OSBPL9|114883|oxysterol binding protein-like 9##AK056617|OSBPL9|114883|oxysterol binding protein-like 9##AK091703|OSBPL9|114883|oxysterol binding protein-like 9##AK027535|OSBPL9|114883|oxysterol binding protein-like 9##AF392445|OSBPL9|114883|oxysterol binding protein-like 9##AY178997|OSBPL9|114883|oxysterol binding protein-like 9##NM_148904|OSBPL9|114883|oxysterol binding protein-like 9##NM_148905|OSBPL9|114883|oxysterol binding protein-like 9##NM_148907|OSBPL9|114883|oxysterol binding protein-like 9##AK315167|OSBPL9|114883|oxysterol binding protein-like 9	0.091684	
chr16	90233184	90233313	reg1034114.p2	3.388	+	TSC_hg19_v1_chr16_+_90168671 AK092558 AX747598	-64572	+	AM690992 AM690991 AM690993 NM_001098173	-90914	-	AB527979 BC107033 AF274347 AF274348 NM_052996	-104587	-	None	None	None	None	None	None	None	None	None	AK092558|FAM157C|100132055|family with sequence similarity 157, member C##AM690992|PRDM7|11105|PR domain containing 7##AM690991|PRDM7|11105|PR domain containing 7##AM690993|PRDM7|11105|PR domain containing 7##NM_001098173|PRDM7|11105|PR domain containing 7##BC107033|PRDM7|11105|PR domain containing 7##AF274347|PRDM7|11105|PR domain containing 7##AF274348|PRDM7|11105|PR domain containing 7##NM_052996|PRDM7|11105|PR domain containing 7	0.987722	CTCF.p2:11:0.988
chr18	11040676	11040754	reg1005651.p1	3.388	+	TSC_hg19_v1_chr18_+_10526095 CR536554 CU674912	-514618	+	TSC_hg19_v1_chr18_+_10526051 BC001889	-514659	+	TSC_hg19_v1_chr18_+_10526033 AK294038 U78107 AK314495	-514687	+	NM_022068	108045	-	NM_182978 AK295088 TSC_hg19_v1_chr18_+_11689262 AK307260 BC050021	648497	+	AK313902 TSC_hg19_v1_chr18_+_11751558 AK290054 NM_001142339 NM_002071	710800	+	CR536554|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##BC001889|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK294038|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##U78107|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##AK314495|NAPG|8774|N-ethylmaleimide-sensitive factor attachment protein, gamma##NM_022068|PIEZO2|63895|piezo-type mechanosensitive ion channel component 2##NM_182978|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK295088|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK307260|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##BC050021|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK313902|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##AK290054|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_001142339|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type##NM_002071|GNAL|2774|guanine nucleotide binding protein (G protein), alpha activating activity polypeptide, olfactory type	0.0	
chr2	162802987	162803124	reg1014683.p1	3.388	+	NM_001178015 NM_001178016 NM_022058 BC051190 AK294767 AK308529 AK309839 BC038298 AK293793 AB040457 BC136269 BC143714 AY376402	-322119	+	AK057394 TSC_hg19_v1_chr2_-_162364248	-438802	-	TSC_hg19_v1_chr2_+_162272908 U49250 AB529217 HQ258587	-530149	+	AY429533 TSC_hg19_v1_chr2_-_162929965 AY429531 AY429532 BC013329 AB451339 AB451488 AB590646 M80536	126907	-	M74777 TSC_hg19_v1_chr2_-_162930507	127448	-	TSC_hg19_v1_chr2_-_162930585 X60708	127522	-	NM_001178015|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##NM_001178016|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##NM_022058|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC051190|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK294767|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK308529|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK309839|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC038298|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK293793|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AB040457|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC136269|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##BC143714|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AY376402|SLC4A10|57282|solute carrier family 4, sodium bicarbonate transporter, member 10##AK057394|AHCTF1P1|285116|AT hook containing transcription factor 1 pseudogene 1##U49250|TBR1|10716|T-box, brain, 1##HQ258587|TBR1|10716|T-box, brain, 1##AY429533|DPP4|1803|dipeptidyl-peptidase 4##AY429531|DPP4|1803|dipeptidyl-peptidase 4##AY429532|DPP4|1803|dipeptidyl-peptidase 4##BC013329|DPP4|1803|dipeptidyl-peptidase 4##AB451339|DPP4|1803|dipeptidyl-peptidase 4##AB451488|DPP4|1803|dipeptidyl-peptidase 4##M80536|DPP4|1803|dipeptidyl-peptidase 4##M74777|DPP4|1803|dipeptidyl-peptidase 4##X60708|DPP4|1803|dipeptidyl-peptidase 4	0.0	
chr2	218361072	218361150	reg1042906.p2	3.388	+	BC029516 NM_003284	-636330	-	AF055033 AK309609 TSC_hg19_v1_chr2_-_217560271 NM_000599	-800851	-	AB463782 BT019706 BT019707 CR456809 M65062 AK314992 M62782 TSC_hg19_v1_chr2_-_217559633	-801545	-	TSC_hg19_v1_chr2_-_218808794 BC140942 AK300345 NM_022648	447670	-	AK001785 TSC_hg19_v1_chr2_-_218843551	482435	-	TSC_hg19_v1_chr2_-_218867719 AK309785	506612	-	BC029516|TNP1|7141|transition protein 1 (during histone to protamine replacement)##NM_003284|TNP1|7141|transition protein 1 (during histone to protamine replacement)##AF055033|IGFBP5|3488|insulin-like growth factor binding protein 5##NM_000599|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019706|IGFBP5|3488|insulin-like growth factor binding protein 5##BT019707|IGFBP5|3488|insulin-like growth factor binding protein 5##CR456809|IGFBP5|3488|insulin-like growth factor binding protein 5##M65062|IGFBP5|3488|insulin-like growth factor binding protein 5##AK314992|IGFBP5|3488|insulin-like growth factor binding protein 5##M62782|IGFBP5|3488|insulin-like growth factor binding protein 5##BC140942|TNS1|7145|tensin 1##AK300345|TNS1|7145|tensin 1##NM_022648|TNS1|7145|tensin 1##AK001785|TNS1|7145|tensin 1##AK309785|TNS1|7145|tensin 1	0.0	
chr22	36847824	36847997	reg1036735.p1	3.388	+	TSC_hg19_v1_chr22_-_36784062 NM_002473	-63852	-	TSC_hg19_v1_chr22_-_36784013 AK304840 AK291609 AB191263	-63902	-	AK131080 TSC_hg19_v1_chr22_-_36783982 BC049849	-63931	-	TSC_hg19_v1_chr22_-_36877665 BC013726 BC050610 AF480262 NM_012473 CR456601	29769	-	TSC_hg19_v1_chr22_-_36903081 BC027716 BC015726	55148	-	AK025714 AK225347 TSC_hg19_v1_chr22_-_36903088 AK315555 NM_024955 BC040351 NM_001102371	55207	-	NM_002473|MYH9|4627|myosin, heavy chain 9, non-muscle##AK304840|MYH9|4627|myosin, heavy chain 9, non-muscle##AK291609|MYH9|4627|myosin, heavy chain 9, non-muscle##AB191263|MYH9|4627|myosin, heavy chain 9, non-muscle##AK131080|MYH9|4627|myosin, heavy chain 9, non-muscle##BC049849|MYH9|4627|myosin, heavy chain 9, non-muscle##BC013726|TXN2|25828|thioredoxin 2##BC050610|TXN2|25828|thioredoxin 2##AF480262|TXN2|25828|thioredoxin 2##NM_012473|TXN2|25828|thioredoxin 2##CR456601|TXN2|25828|thioredoxin 2##BC027716|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC015726|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK025714|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK225347|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##AK315555|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##NM_024955|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##BC040351|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2##NM_001102371|FOXRED2|80020|FAD-dependent oxidoreductase domain containing 2	0.511554	CTCF.p2:17:0.512
chr3	10223461	10223599	reg1034058.p2	3.388	+	NM_001570 BC125184 AK299033 AK312841 TSC_hg19_v1_chr3_+_10206602 AF026273 AB587544 AJ496794	-16930	+	TSC_hg19_v1_chr3_+_10183517 AB528056	-39992	+	AK304002 TSC_hg19_v1_chr3_+_10183487	-40032	+	TSC_hg19_v1_chr3_+_10290182 NM_014760	66645	+	TSC_hg19_v1_chr3_+_10290210 D86972	66732	+	TSC_hg19_v1_chr3_+_10290370 AK289794 BC090935 BC101776 BC101770	66992	+	NM_001570|IRAK2|3656|interleukin-1 receptor-associated kinase 2##BC125184|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK299033|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK312841|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AF026273|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AJ496794|IRAK2|3656|interleukin-1 receptor-associated kinase 2##AK304002|VHL|7428|von Hippel-Lindau tumor suppressor##NM_014760|TATDN2|9797|TatD DNase domain containing 2##D86972|TATDN2|9797|TatD DNase domain containing 2##AK289794|TATDN2|9797|TatD DNase domain containing 2##BC090935|TATDN2|9797|TatD DNase domain containing 2##BC101776|TATDN2|9797|TatD DNase domain containing 2##BC101770|TATDN2|9797|TatD DNase domain containing 2	0.0	
chr5	52211109	52211281	reg1013675.p1	3.388	+	AK025729 BC007650 TSC_hg19_v1_chr5_+_52095991 BC005889 BC007249 AF132951 AK312633 AF139828 BC022789	-115209	+	TSC_hg19_v1_chr5_+_52083769 AK056144 AY117399 NM_015946 AK300423 BC050277 NM_181501 BC137121 BC137122	-127206	+	AK290742 TSC_hg19_v1_chr5_+_50679265 BC017027 U07559	-1531942	+	TSC_hg19_v1_chr5_+_52285182 NM_002203 AK307952 X17033 BC143505 BC143508 BC143509 BC143511 BC143512 AB385225	73925	+	BC046097 AF155659 NM_004531	194110	-	TSC_hg19_v1_chr5_-_52405588 BC029287 AF091871 AF117815 AK312887 NM_176806 BC095417	194401	-	AK025729|PELO|53918|pelota homolog (Drosophila)##BC007650|PELO|53918|pelota homolog (Drosophila)##BC005889|PELO|53918|pelota homolog (Drosophila)##BC007249|PELO|53918|pelota homolog (Drosophila)##AF132951|PELO|53918|pelota homolog (Drosophila)##AK312633|PELO|53918|pelota homolog (Drosophila)##AF139828|PELO|53918|pelota homolog (Drosophila)##BC022789|PELO|53918|pelota homolog (Drosophila)##AK056144|PELO|53918|pelota homolog (Drosophila)##AY117399|PELO|53918|pelota homolog (Drosophila)##NM_015946|PELO|53918|pelota homolog (Drosophila)##AK300423|ITGA1|3672|integrin, alpha 1##BC050277|ITGA1|3672|integrin, alpha 1##NM_181501|ITGA1|3672|integrin, alpha 1##BC137121|ITGA1|3672|integrin, alpha 1##BC137122|ITGA1|3672|integrin, alpha 1##AK290742|ISL1|3670|ISL LIM homeobox 1##BC017027|ISL1|3670|ISL LIM homeobox 1##U07559|ISL1|3670|ISL LIM homeobox 1##NM_002203|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##AK307952|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##X17033|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143505|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143508|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143509|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143511|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC143512|ITGA2|3673|integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor)##BC046097|MOCS2|4338|molybdenum cofactor synthesis 2##AF155659|MOCS2|4338|molybdenum cofactor synthesis 2##NM_004531|MOCS2|4338|molybdenum cofactor synthesis 2##BC029287|MOCS2|4338|molybdenum cofactor synthesis 2##AF091871|MOCS2|4338|molybdenum cofactor synthesis 2##AF117815|MOCS2|4338|molybdenum cofactor synthesis 2##AK312887|MOCS2|4338|molybdenum cofactor synthesis 2##NM_176806|MOCS2|4338|molybdenum cofactor synthesis 2##BC095417|MOCS2|4338|molybdenum cofactor synthesis 2	0.0	
chr6	105879455	105879623	reg1016228.p2	3.388	+	AK314195 TSC_hg19_v1_chr6_-_105850978 NM_002726	-28544	-	BC030636 TSC_hg19_v1_chr6_-_105850958	-28581	-	AB020018 AY660966 D21102 X74496 AB028867 DQ893427 DQ896742 TSC_hg19_v1_chr6_-_105850927	-28693	-	TSC_hg19_v1_chr6_+_106534188 AF084199 AY198414 NM_001198	654657	+	TSC_hg19_v1_chr6_+_106534247 AK289556 AL832963	654696	+	AK301341 NM_182907 AY198415 BC103832 BC103833 BC103834 BC103835 EF151143	667265	+	AK314195|PREP|5550|prolyl endopeptidase##NM_002726|PREP|5550|prolyl endopeptidase##BC030636|PREP|5550|prolyl endopeptidase##AB020018|PREP|5550|prolyl endopeptidase##AY660966|PREP|5550|prolyl endopeptidase##D21102|PREP|5550|prolyl endopeptidase##X74496|PREP|5550|prolyl endopeptidase##AB028867|PREP|5550|prolyl endopeptidase##DQ893427|PREP|5550|prolyl endopeptidase##DQ896742|PREP|5550|prolyl endopeptidase##AF084199|PRDM1|639|PR domain containing 1, with ZNF domain##AY198414|PRDM1|639|PR domain containing 1, with ZNF domain##NM_001198|PRDM1|639|PR domain containing 1, with ZNF domain##AK289556|PRDM1|639|PR domain containing 1, with ZNF domain##AL832963|PRDM1|639|PR domain containing 1, with ZNF domain##AK301341|PRDM1|639|PR domain containing 1, with ZNF domain##NM_182907|PRDM1|639|PR domain containing 1, with ZNF domain##AY198415|PRDM1|639|PR domain containing 1, with ZNF domain##BC103832|PRDM1|639|PR domain containing 1, with ZNF domain##BC103833|PRDM1|639|PR domain containing 1, with ZNF domain##BC103834|PRDM1|639|PR domain containing 1, with ZNF domain##BC103835|PRDM1|639|PR domain containing 1, with ZNF domain##EF151143|PRDM1|639|PR domain containing 1, with ZNF domain	0.0	
chr7	71217242	71217327	reg1041445.p1	3.388	+	AB078148 AB527411 AF410457 AJ626726 BC067524 BC067525 BC069624 BC069628 BC069636 BC069645 BC069997 CU686952 NM_022479	-619496	+	TSC_hg19_v1_chr7_+_70231164 AK296981	-986079	+	TSC_hg19_v1_chr7_+_69064580 BC011643	-2152696	+	AK123862 TSC_hg19_v1_chr7_-_71801809	584494	-	NM_001017440 TSC_hg19_v1_chr7_-_71802376	585020	-	NM_031468	660075	-	AB078148|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AF410457|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AJ626726|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067524|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC067525|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069624|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069628|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069636|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069645|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##BC069997|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##NM_022479|WBSCR17|64409|Williams-Beuren syndrome chromosome region 17##AK296981|AUTS2|26053|autism susceptibility candidate 2##BC011643|AUTS2|26053|autism susceptibility candidate 2##AK123862|CALN1|83698|calneuron 1##NM_001017440|CALN1|83698|calneuron 1##NM_031468|CALN1|83698|calneuron 1	0.932366	CTCF.p2:-15:0.932
chr9	139519500	139519626	reg1013137.p1	3.388	+	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	-79313	-	TSC_hg19_v1_chr9_-_139378220 AB593115	-141321	-	BC036221 NM_152571 AK055336	-141593	+	NM_016215 AL512735 AY358903 BC088371 AY358902	37838	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	40652	+	BC012377 TSC_hg19_v1_chr9_+_139560248	40708	+	AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7##BC012377|EGFL7|51162|EGF-like-domain, multiple 7	0.0	
chr10	8173150	8173326	reg1026278.p1	3.387	+	TSC_hg19_v1_chr10_+_8097355 X55122 X58072 X55037 M69106 AB463676 AM392571 AM392688 CU678358	-75755	+	BC003070 AK298213 TSC_hg19_v1_chr10_+_8096779	-76463	+	TSC_hg19_v1_chr10_+_8096650 BC006793 NM_001002295 NM_002051	-76589	+	TSC_hg19_v1_chr10_+_11047254 NM_001025077	2874019	+	TSC_hg19_v1_chr10_+_11047290 AF090693 AK297380	2874047	+	AK299548 TSC_hg19_v1_chr10_+_11047339	2874102	+	X55122|GATA3|2625|GATA binding protein 3##X58072|GATA3|2625|GATA binding protein 3##X55037|GATA3|2625|GATA binding protein 3##M69106|GATA3|2625|GATA binding protein 3##AM392571|GATA3|2625|GATA binding protein 3##AM392688|GATA3|2625|GATA binding protein 3##BC003070|GATA3|2625|GATA binding protein 3##AK298213|GATA3|2625|GATA binding protein 3##BC006793|GATA3|2625|GATA binding protein 3##NM_001002295|GATA3|2625|GATA binding protein 3##NM_002051|GATA3|2625|GATA binding protein 3##NM_001025077|CELF2|10659|CUGBP, Elav-like family member 2##AF090693|CELF2|10659|CUGBP, Elav-like family member 2##AK297380|CELF2|10659|CUGBP, Elav-like family member 2##AK299548|CELF2|10659|CUGBP, Elav-like family member 2	0.0	
chr10	83598849	83598989	reg1042469.p1	3.387	+	AK123978 NM_001145719	-1298345	+	AK123885 NM_207372	-1301262	+	TSC_hg19_v1_chr10_+_82214076 BC002920	-1384815	+	BC136811 NM_001010848 NM_001165972 DQ001411 HM068873 HM068874	36163	+	DQ857894 NM_001165973	38523	+	NM_014394 TSC_hg19_v1_chr10_+_85899313 AK299937 AF078863 AF131820 AL136713 AF161400 AK130094 BC022872 AK225318 AF060923 AK098770 AK298332 BC010354 AK130097 AK297960 AK292864 AY358824	2300338	+	AK123978|SH2D4B|387694|SH2 domain containing 4B##NM_001145719|SH2D4B|387694|SH2 domain containing 4B##AK123885|SH2D4B|387694|SH2 domain containing 4B##NM_207372|SH2D4B|387694|SH2 domain containing 4B##BC002920|TSPAN14|81619|tetraspanin 14##BC136811|NRG3|10718|neuregulin 3##NM_001010848|NRG3|10718|neuregulin 3##NM_001165972|NRG3|10718|neuregulin 3##DQ001411|NRG3|10718|neuregulin 3##HM068873|NRG3|10718|neuregulin 3##HM068874|NRG3|10718|neuregulin 3##DQ857894|NRG3|10718|neuregulin 3##NM_001165973|NRG3|10718|neuregulin 3##NM_014394|GHITM|27069|growth hormone inducible transmembrane protein##AK299937|GHITM|27069|growth hormone inducible transmembrane protein##AF078863|GHITM|27069|growth hormone inducible transmembrane protein##AF131820|GHITM|27069|growth hormone inducible transmembrane protein##AL136713|GHITM|27069|growth hormone inducible transmembrane protein##AF161400|GHITM|27069|growth hormone inducible transmembrane protein##AK130094|GHITM|27069|growth hormone inducible transmembrane protein##BC022872|GHITM|27069|growth hormone inducible transmembrane protein##AK225318|GHITM|27069|growth hormone inducible transmembrane protein##AF060923|GHITM|27069|growth hormone inducible transmembrane protein##AK098770|GHITM|27069|growth hormone inducible transmembrane protein##AK298332|GHITM|27069|growth hormone inducible transmembrane protein##BC010354|GHITM|27069|growth hormone inducible transmembrane protein##AK130097|GHITM|27069|growth hormone inducible transmembrane protein##AK297960|GHITM|27069|growth hormone inducible transmembrane protein##AK292864|GHITM|27069|growth hormone inducible transmembrane protein##AY358824|GHITM|27069|growth hormone inducible transmembrane protein	0.364339	CTCF.p2:1:0.364
chr1	178541865	178541997	reg1039006.p1	3.387	+	AL136694 NM_001170722 NM_001170723 NM_001170724 NM_032126 AK093269 AX748023 AK097518 BC034972 AB528085 AM392874 AM393664	-59665	+	AF047711 NM_004841 AK290308	-231297	+	BC110611 TSC_hg19_v1_chr1_+_178063651	-478290	+	TSC_hg19_v1_chr1_+_178694378 BC047391 NM_152663 AK001106 AK301753	152442	+	AK223467 BC050640 AB056476 TSC_hg19_v1_chr1_-_178840178 AY358278 NM_004673	298215	-	TSC_hg19_v1_chr1_+_178995028 AB007944	453089	+	AL136694|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170722|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170723|C1orf49|84066|chromosome 1 open reading frame 49##NM_001170724|C1orf49|84066|chromosome 1 open reading frame 49##NM_032126|C1orf49|84066|chromosome 1 open reading frame 49##AK093269|C1orf49|84066|chromosome 1 open reading frame 49##BC034972|C1orf49|84066|chromosome 1 open reading frame 49##AM392874|C1orf49|84066|chromosome 1 open reading frame 49##AM393664|C1orf49|84066|chromosome 1 open reading frame 49##AF047711|RASAL2|9462|RAS protein activator like 2##NM_004841|RASAL2|9462|RAS protein activator like 2##AK290308|RASAL2|9462|RAS protein activator like 2##BC110611|RASAL2|9462|RAS protein activator like 2##BC047391|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##NM_152663|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK001106|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK301753|RALGPS2|55103|Ral GEF with PH domain and SH3 binding motif 2##AK223467|ANGPTL1|9068|angiopoietin-like 1##BC050640|ANGPTL1|9068|angiopoietin-like 1##AB056476|ANGPTL1|9068|angiopoietin-like 1##AY358278|ANGPTL1|9068|angiopoietin-like 1##NM_004673|ANGPTL1|9068|angiopoietin-like 1##AB007944|FAM20B|9917|family with sequence similarity 20, member B	0.037538	
chr11	88168722	88168902	reg1031317.p2	3.387	+	TSC_hg19_v1_chr11_-_88070905 BX537913 NM_001114173 NM_001814 NM_148170	-97881	-	TSC_hg19_v1_chr11_-_88070902 AK223038 AK296190 AK311923 BC107770	-97910	-	AB527642 AM393622 BC146692 TSC_hg19_v1_chr11_-_88070864 AF234263 AF234264 AF254757 AF525032 AF525033 AK292117 BC023559 X87212 BC100891 BC100892 BC100893 BC100894 BC109386 BC110071 BC113850 BC113897 BC054028 BC008059	-97945	-	AY608336 D28538 D28539 NM_001143831	612327	-	AK291362 NM_000842	628003	-	NM_000372 BC027179 M74314 Y00819 U01873 J03581	742268	+	BX537913|CTSC|1075|cathepsin C##NM_001114173|CTSC|1075|cathepsin C##NM_001814|CTSC|1075|cathepsin C##NM_148170|CTSC|1075|cathepsin C##AK223038|CTSC|1075|cathepsin C##AK296190|CTSC|1075|cathepsin C##AK311923|CTSC|1075|cathepsin C##BC107770|CTSC|1075|cathepsin C##AM393622|CTSC|1075|cathepsin C##BC146692|CTSC|1075|cathepsin C##AF234263|CTSC|1075|cathepsin C##AF234264|CTSC|1075|cathepsin C##AF254757|CTSC|1075|cathepsin C##AF525032|CTSC|1075|cathepsin C##AF525033|CTSC|1075|cathepsin C##AK292117|CTSC|1075|cathepsin C##BC023559|CTSC|1075|cathepsin C##X87212|CTSC|1075|cathepsin C##BC100891|CTSC|1075|cathepsin C##BC100892|CTSC|1075|cathepsin C##BC100893|CTSC|1075|cathepsin C##BC100894|CTSC|1075|cathepsin C##BC109386|CTSC|1075|cathepsin C##BC110071|CTSC|1075|cathepsin C##BC113850|CTSC|1075|cathepsin C##BC113897|CTSC|1075|cathepsin C##BC054028|CTSC|1075|cathepsin C##BC008059|CTSC|1075|cathepsin C##AY608336|GRM5|2915|glutamate receptor, metabotropic 5##D28538|GRM5|2915|glutamate receptor, metabotropic 5##D28539|GRM5|2915|glutamate receptor, metabotropic 5##NM_001143831|GRM5|2915|glutamate receptor, metabotropic 5##AK291362|GRM5|2915|glutamate receptor, metabotropic 5##NM_000842|GRM5|2915|glutamate receptor, metabotropic 5##NM_000372|TYR|7299|tyrosinase (oculocutaneous albinism IA)##BC027179|TYR|7299|tyrosinase (oculocutaneous albinism IA)##M74314|TYR|7299|tyrosinase (oculocutaneous albinism IA)##Y00819|TYR|7299|tyrosinase (oculocutaneous albinism IA)##U01873|TYR|7299|tyrosinase (oculocutaneous albinism IA)##J03581|TYR|7299|tyrosinase (oculocutaneous albinism IA)	0.0	
chr12	93337725	93337837	reg1040590.p1	3.387	+	TSC_hg19_v1_chr12_-_93323097 NM_003566	-14683	-	BC017837 TSC_hg19_v1_chr12_-_93323072 AK292008 AK307918	-14738	-	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	-14843	-	TSC_hg19_v1_chr12_+_93771701 NM_019094 NM_199040 AK074343 AB007956 AK315778 AK223497 AF311215 BC012069 AF191649 AF191653 BC051310 AF311216 AF191650 AB385340 BT020109 BT020110 DQ892199 DQ895394 AF191651 AF191652 AF067803	434111	+	AB464336 BT006873 DQ896763 EU176463 EU176466 BC003365 TSC_hg19_v1_chr12_-_93835699 BC108704	497905	-	TSC_hg19_v1_chr12_-_93835718 D83004	497937	-	NM_003566|EEA1|8411|early endosome antigen 1##BC017837|EEA1|8411|early endosome antigen 1##AK292008|EEA1|8411|early endosome antigen 1##AK307918|EEA1|8411|early endosome antigen 1##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1##NM_019094|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##NM_199040|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK074343|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AB007956|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK315778|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AK223497|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311215|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##BC012069|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191649|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191653|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BC051310|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF311216|NUDT4P1|440672|nudix (nucleoside diphosphate linked moiety X)-type motif 4 pseudogene 1##AF191650|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020109|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT020110|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ892199|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##DQ895394|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191651|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF191652|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##AF067803|NUDT4|11163|nudix (nucleoside diphosphate linked moiety X)-type motif 4##BT006873|UBE2N|7334|ubiquitin-conjugating enzyme E2N##DQ896763|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176463|UBE2N|7334|ubiquitin-conjugating enzyme E2N##EU176466|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC003365|UBE2N|7334|ubiquitin-conjugating enzyme E2N##BC108704|UBE2N|7334|ubiquitin-conjugating enzyme E2N##D83004|UBE2N|7334|ubiquitin-conjugating enzyme E2N	0.867228	CTCF.p2:2:0.867
chr13	29329516	29329650	reg1038308.p2	3.387	+	BX537565 BC060850 BC068556 TSC_hg19_v1_chr13_-_29293107 AK093932 AX748370 BC036662 NM_001135919 NM_181785	-36528	-	TSC_hg19_v1_chr13_+_29233279 AF275807 EF535527 AF262975	-96289	+	GU045555 GU045556 NM_015932 TSC_hg19_v1_chr13_+_29233269 AF077200 AF125097 BC014334 AK312118 BC003390	-96375	+	BC150245 AB018317 NM_001033602 AB384524	269192	+	BC032481 NM_015233 AK293970 BC119654 BC119655 BC129985	673227	+	AK301633 TSC_hg19_v1_chr13_+_30070532	740924	+	BX537565|SLC46A3|283537|solute carrier family 46, member 3##BC060850|SLC46A3|283537|solute carrier family 46, member 3##BC068556|SLC46A3|283537|solute carrier family 46, member 3##AK093932|SLC46A3|283537|solute carrier family 46, member 3##BC036662|SLC46A3|283537|solute carrier family 46, member 3##NM_001135919|SLC46A3|283537|solute carrier family 46, member 3##NM_181785|SLC46A3|283537|solute carrier family 46, member 3##AF275807|POMP|51371|proteasome maturation protein##EF535527|POMP|51371|proteasome maturation protein##AF262975|POMP|51371|proteasome maturation protein##GU045555|POMP|51371|proteasome maturation protein##GU045556|POMP|51371|proteasome maturation protein##NM_015932|POMP|51371|proteasome maturation protein##AF077200|POMP|51371|proteasome maturation protein##AF125097|POMP|51371|proteasome maturation protein##BC014334|POMP|51371|proteasome maturation protein##AK312118|POMP|51371|proteasome maturation protein##BC003390|POMP|51371|proteasome maturation protein##BC150245|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AB018317|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_001033602|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC032481|MTUS2|23281|microtubule associated tumor suppressor candidate 2##NM_015233|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK293970|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119654|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC119655|MTUS2|23281|microtubule associated tumor suppressor candidate 2##BC129985|MTUS2|23281|microtubule associated tumor suppressor candidate 2##AK301633|MTUS2|23281|microtubule associated tumor suppressor candidate 2	0.011158	
chr13	33161669	33161792	reg1032295.p2	3.387	+	TSC_hg19_v1_chr13_+_33160686 BC039256 U95825 BC070274 AK299340	-1047	+	TSC_hg19_v1_chr13_+_33160649 AB023196	-1091	+	TSC_hg19_v1_chr13_+_33160610 AL137201	-1112	+	TSC_hg19_v1_chr13_+_33590478 AB005142 NM_004795	428793	+	AY082590 BC046563 NM_001243466 NM_178007	598485	-	AL049801 AY082591 AK091804 NM_001243474 NM_052851	618434	-	BC039256|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##U95825|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##BC070274|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AK299340|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB023196|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AL137201|PDS5B|23047|PDS5, regulator of cohesion maintenance, homolog B (S. cerevisiae)##AB005142|KL|9365|klotho##NM_004795|KL|9365|klotho##AY082590|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##BC046563|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243466|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_178007|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AL049801|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AY082591|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##AK091804|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_001243474|STARD13|90627|StAR-related lipid transfer (START) domain containing 13##NM_052851|STARD13|90627|StAR-related lipid transfer (START) domain containing 13	0.0	
chr1	46953585	46953677	reg1045779.p1	3.387	+	TSC_hg19_v1_chr1_+_46859963 NM_001441 U82535 BC034478 BC093632 BC111941 BC110404	-93655	+	NM_199044 TSC_hg19_v1_chr1_+_46806483 AK021577 BC014441 BX648592 AK291741 AK295003 AK311009 AB528648 CU676995	-147188	+	TSC_hg19_v1_chr1_+_46769369 D28439 BC093060 BC001934 NM_006004 BC015177 BC107703 BC001426 AK311967 Y00764 M36647 BT007070	-184244	+	NM_147192 NM_172225 AB037699 AF398527 AF398528 AB527840	19041	+	NM_001097611	63255	-	BC002755 AB000409 AK096423 TSC_hg19_v1_chr1_-_47069922	116273	-	NM_001441|FAAH|2166|fatty acid amide hydrolase##U82535|FAAH|2166|fatty acid amide hydrolase##BC034478|FAAH|2166|fatty acid amide hydrolase##BC093632|FAAH|2166|fatty acid amide hydrolase##BC111941|FAAH|2166|fatty acid amide hydrolase##BC110404|FAAH|2166|fatty acid amide hydrolase##NM_199044|NSUN4|387338|NOP2/Sun domain family, member 4##AK021577|NSUN4|387338|NOP2/Sun domain family, member 4##BC014441|NSUN4|387338|NOP2/Sun domain family, member 4##BX648592|NSUN4|387338|NOP2/Sun domain family, member 4##AK291741|NSUN4|387338|NOP2/Sun domain family, member 4##AK295003|NSUN4|387338|NOP2/Sun domain family, member 4##D28439|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC093060|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001934|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_006004|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC015177|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC107703|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BC001426|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##AK311967|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##Y00764|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##M36647|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##BT007070|UQCRH|7388|ubiquinol-cytochrome c reductase hinge protein##NM_147192|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_172225|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AB037699|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398527|DMBX1|127343|diencephalon/mesencephalon homeobox 1##AF398528|DMBX1|127343|diencephalon/mesencephalon homeobox 1##NM_001097611|KNCN|148930|kinocilin##BC002755|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AB000409|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1##AK096423|MKNK1|8569|MAP kinase interacting serine/threonine kinase 1	0.142332	
chr14	75079455	75079550	reg1030883.p2	3.387	+	TSC_hg19_v1_chr14_-_75078940 BC078659 Z37976 NM_000428 S82451	-643	-	TSC_hg19_v1_chr14_+_74960467 AK290728 NM_194279 BC015771 BX248252 BC032893	-119044	+	TSC_hg19_v1_chr14_-_74960037 AK311931 BC002532 NM_006432	-119443	-	TSC_hg19_v1_chr14_-_75179784 AB002315 AK304217 AK296912 BX248747 BC032944 NM_001039479	100274	-	TSC_hg19_v1_chr14_+_75179883 NM_015962 AK290666 BC022361 AK021636 BC080600 BX248271	100373	+	TSC_hg19_v1_chr14_+_75230066 AK095760 NM_019589	150530	+	BC078659|LTBP2|4053|latent transforming growth factor beta binding protein 2##Z37976|LTBP2|4053|latent transforming growth factor beta binding protein 2##NM_000428|LTBP2|4053|latent transforming growth factor beta binding protein 2##S82451|LTBP2|4053|latent transforming growth factor beta binding protein 2##AK290728|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##NM_194279|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##BC015771|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##BX248252|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##BC032893|ISCA2|122961|iron-sulfur cluster assembly 2 homolog (S. cerevisiae)##AK311931|NPC2|10577|Niemann-Pick disease, type C2##BC002532|NPC2|10577|Niemann-Pick disease, type C2##NM_006432|NPC2|10577|Niemann-Pick disease, type C2##AB002315|KIAA0317|9870|KIAA0317##AK304217|KIAA0317|9870|KIAA0317##AK296912|KIAA0317|9870|KIAA0317##BX248747|KIAA0317|9870|KIAA0317##BC032944|KIAA0317|9870|KIAA0317##NM_001039479|KIAA0317|9870|KIAA0317##NM_015962|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK290666|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC022361|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK021636|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BC080600|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##BX248271|FCF1|51077|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)##AK095760|YLPM1|56252|YLP motif containing 1##NM_019589|YLPM1|56252|YLP motif containing 1	0.799101	CTCF.p2:-32:0.799
chr1	8226061	8226190	reg1026078.p2	3.387	+	NM_018948 TSC_hg19_v1_chr1_-_8086396	-139727	-	AK315718 BC025337 TSC_hg19_v1_chr1_-_8086370 AK096149	-139764	-	AB528431 AJ276373 DQ892137 DQ895331 BC012839 TSC_hg19_v1_chr1_-_8075752	-150410	-	NM_001080397	158264	+	TSC_hg19_v1_chr1_-_8483893 AF016005 NM_001042682	257892	-	BC062342 AB036737 TSC_hg19_v1_chr1_-_8877700 NM_001042681 NM_012102 BC009619	651467	-	NM_018948|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK315718|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC025337|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AK096149|ERRFI1|54206|ERBB receptor feedback inhibitor 1##AJ276373|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ892137|ERRFI1|54206|ERBB receptor feedback inhibitor 1##DQ895331|ERRFI1|54206|ERBB receptor feedback inhibitor 1##BC012839|ERRFI1|54206|ERBB receptor feedback inhibitor 1##NM_001080397|SLC45A1|50651|solute carrier family 45, member 1##AF016005|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042682|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC062342|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##AB036737|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_001042681|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##NM_012102|RERE|473|arginine-glutamic acid dipeptide (RE) repeats##BC009619|RERE|473|arginine-glutamic acid dipeptide (RE) repeats	0.0	
chr18	34163528	34163646	reg1038071.p2	3.387	+	TSC_hg19_v1_chr18_+_33877676 AK128053 NM_025135 AB084087 HM191478	-285873	+	TSC_hg19_v1_chr18_+_33767481 NM_017947 AK000740 BC012079 AK222886 DQ895841 EU176372	-396111	+	TSC_hg19_v1_chr18_+_33709886 AK300201 BC032553 AK222791 AK001741 BC007098 AB590856 CU689420 CR457269	-453699	+	TSC_hg19_v1_chr18_-_34408744 AB463512 BC022199 AK000543	245176	-	TSC_hg19_v1_chr18_-_34408937 AK295817 BC015178	245307	-	AB073382 TSC_hg19_v1_chr18_-_34408948	245365	-	AK128053|FHOD3|80206|formin homology 2 domain containing 3##NM_025135|FHOD3|80206|formin homology 2 domain containing 3##AB084087|FHOD3|80206|formin homology 2 domain containing 3##HM191478|FHOD3|80206|formin homology 2 domain containing 3##NM_017947|MOCOS|55034|molybdenum cofactor sulfurase##AK000740|MOCOS|55034|molybdenum cofactor sulfurase##BC012079|MOCOS|55034|molybdenum cofactor sulfurase##AK222886|MOCOS|55034|molybdenum cofactor sulfurase##DQ895841|MOCOS|55034|molybdenum cofactor sulfurase##EU176372|MOCOS|55034|molybdenum cofactor sulfurase##AK300201|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC032553|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK222791|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##AK001741|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC007098|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##CR457269|ELP2|55250|elongation protein 2 homolog (S. cerevisiae)##BC022199|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK000543|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AK295817|TPGS2|25941|tubulin polyglutamylase complex subunit 2##BC015178|TPGS2|25941|tubulin polyglutamylase complex subunit 2##AB073382|TPGS2|25941|tubulin polyglutamylase complex subunit 2	0.0	
chr19	13953121	13953196	reg1039773.p1	3.387	+	AL832183 BX640708 TSC_hg19_v1_chr19_-_13947102	-6056	-	TSC_hg19_v1_chr19_+_13906256 AK024452 NM_023072	-46913	+	TSC_hg19_v1_chr19_+_13885286 BC015465 AF086483 AF078852 DQ891569 DQ894761 AK311855	-67874	+	BC101209 BC101210 NM_001098622	34904	+	AK097431 NM_024323	63750	-	NM_017721 TSC_hg19_v1_chr19_+_14017006	63822	+	AL832183|LOC284454|284454|uncharacterized LOC284454##BX640708|LOC284454|284454|uncharacterized LOC284454##AK024452|ZSWIM4|65249|zinc finger, SWIM-type containing 4##NM_023072|ZSWIM4|65249|zinc finger, SWIM-type containing 4##BC015465|C19orf53|28974|chromosome 19 open reading frame 53##AF086483|C19orf53|28974|chromosome 19 open reading frame 53##AF078852|C19orf53|28974|chromosome 19 open reading frame 53##DQ891569|C19orf53|28974|chromosome 19 open reading frame 53##DQ894761|C19orf53|28974|chromosome 19 open reading frame 53##AK311855|C19orf53|28974|chromosome 19 open reading frame 53##BC101209|NANOS3|342977|nanos homolog 3 (Drosophila)##BC101210|NANOS3|342977|nanos homolog 3 (Drosophila)##NM_001098622|NANOS3|342977|nanos homolog 3 (Drosophila)##AK097431|C19orf57|79173|chromosome 19 open reading frame 57##NM_024323|C19orf57|79173|chromosome 19 open reading frame 57##NM_017721|CC2D1A|54862|coiled-coil and C2 domain containing 1A	0.0	
chr19	18954593	18954774	reg1042365.p1	3.387	+	TSC_hg19_v1_chr19_+_18942822 U65533 AF074016 D86988 U59323	-11870	+	TSC_hg19_v1_chr19_+_18942742 NM_002911 BC039817	-11938	+	AB086984 BC033676 BC110847 L32137 BC125092 TSC_hg19_v1_chr19_-_18902115 AK074508 AK223216 AK290595 AK296586 AK297798 AK297814 NM_000095	-52586	-	BC032615 TSC_hg19_v1_chr19_-_19006935 M62302 BC022450 NM_001492 NM_021267 NM_198207	52268	-	TSC_hg19_v1_chr19_-_19007395 BC084582 AK293463	52782	-	AB528108 AM393761 CR456886 DQ893417 DQ896735 TSC_hg19_v1_chr19_-_19030164 BC017285 BC003155 AJ249366 AL136928 BC007250	75482	-	U65533|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##AF074016|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##D86988|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##U59323|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##NM_002911|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##BC039817|UPF1|5976|UPF1 regulator of nonsense transcripts homolog (yeast)##AB086984|COMP|1311|cartilage oligomeric matrix protein##BC033676|COMP|1311|cartilage oligomeric matrix protein##BC110847|COMP|1311|cartilage oligomeric matrix protein##L32137|COMP|1311|cartilage oligomeric matrix protein##BC125092|COMP|1311|cartilage oligomeric matrix protein##AK074508|COMP|1311|cartilage oligomeric matrix protein##AK223216|COMP|1311|cartilage oligomeric matrix protein##AK290595|COMP|1311|cartilage oligomeric matrix protein##AK296586|COMP|1311|cartilage oligomeric matrix protein##AK297798|COMP|1311|cartilage oligomeric matrix protein##AK297814|COMP|1311|cartilage oligomeric matrix protein##NM_000095|COMP|1311|cartilage oligomeric matrix protein##BC032615|CERS1|10715|ceramide synthase 1##M62302|GDF1|2657|growth differentiation factor 1##NM_001492|GDF1|2657|growth differentiation factor 1##NM_021267|CERS1|10715|ceramide synthase 1##NM_198207|CERS1|10715|ceramide synthase 1##BC084582|CERS1|10715|ceramide synthase 1##AM393761|COPE|11316|coatomer protein complex, subunit epsilon##CR456886|COPE|11316|coatomer protein complex, subunit epsilon##DQ893417|COPE|11316|coatomer protein complex, subunit epsilon##DQ896735|COPE|11316|coatomer protein complex, subunit epsilon##BC017285|COPE|11316|coatomer protein complex, subunit epsilon##BC003155|COPE|11316|coatomer protein complex, subunit epsilon##AJ249366|COPE|11316|coatomer protein complex, subunit epsilon##AL136928|COPE|11316|coatomer protein complex, subunit epsilon##BC007250|COPE|11316|coatomer protein complex, subunit epsilon	0.0	
chr20	8012796	8012934	reg1043250.p1	3.387	+	TSC_hg19_v1_chr20_-_8000461 AK075404 BC044777	-12393	-	TSC_hg19_v1_chr20_-_8000409 AY359004 NM_021156 AK074838	-12458	-	TSC_hg19_v1_chr20_-_8000347 AB464296 BC033787 BC021964	-12565	-	TSC_hg19_v1_chr20_+_8112912 AB011153 AK310597 BC117231 AX721082 AJ278313 AJ278314 BC069420 NM_015192 NM_182734 AB463171 HQ258537	100165	+	TSC_hg19_v1_chr20_+_9049689 AK307837 NM_001172646	1036818	+	AK307482 TSC_hg19_v1_chr20_+_9049806	1036933	+	AK075404|TMX4|56255|thioredoxin-related transmembrane protein 4##BC044777|TMX4|56255|thioredoxin-related transmembrane protein 4##AY359004|TMX4|56255|thioredoxin-related transmembrane protein 4##NM_021156|TMX4|56255|thioredoxin-related transmembrane protein 4##AK074838|TMX4|56255|thioredoxin-related transmembrane protein 4##BC033787|TMX4|56255|thioredoxin-related transmembrane protein 4##BC021964|TMX4|56255|thioredoxin-related transmembrane protein 4##AB011153|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK310597|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC117231|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278313|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AJ278314|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##BC069420|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_015192|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##NM_182734|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##HQ258537|PLCB1|23236|phospholipase C, beta 1 (phosphoinositide-specific)##AK307837|PLCB4|5332|phospholipase C, beta 4##NM_001172646|PLCB4|5332|phospholipase C, beta 4##AK307482|PLCB4|5332|phospholipase C, beta 4	0.098784	
chr3	195848041	195848130	reg1039538.p2	3.387	+	TSC_hg19_v1_chr3_-_195808999 NM_001128148	-39069	-	TSC_hg19_v1_chr3_-_195808984 M11507	-39102	-	TSC_hg19_v1_chr3_-_195808962 AK291723 AK309923 BX537966 NM_003234 AK294758	-39124	-	BC034801 BC022078 NM_001039617 AK122907	90196	-	AK172837 NM_152672 TSC_hg19_v1_chr3_+_195943404 AK300996	95309	+	L28957 TSC_hg19_v1_chr3_-_196014549 AK309300 AK313450	166450	-	NM_001128148|TFRC|7037|transferrin receptor (p90, CD71)##M11507|TFRC|7037|transferrin receptor (p90, CD71)##AK291723|TFRC|7037|transferrin receptor (p90, CD71)##AK309923|TFRC|7037|transferrin receptor (p90, CD71)##BX537966|TFRC|7037|transferrin receptor (p90, CD71)##NM_003234|TFRC|7037|transferrin receptor (p90, CD71)##AK294758|TFRC|7037|transferrin receptor (p90, CD71)##BC034801|ZDHHC19|131540|zinc finger, DHHC-type containing 19##BC022078|ZDHHC19|131540|zinc finger, DHHC-type containing 19##NM_001039617|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK122907|ZDHHC19|131540|zinc finger, DHHC-type containing 19##AK172837|OSTalpha|200931|organic solute transporter alpha##NM_152672|OSTalpha|200931|organic solute transporter alpha##AK300996|OSTalpha|200931|organic solute transporter alpha##L28957|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK309300|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha##AK313450|PCYT1A|5130|phosphate cytidylyltransferase 1, choline, alpha	0.0	
chr3	99290264	99290335	reg1039833.p2	3.387	+	TSC_hg19_v1_chr3_-_98620527 AK056350 AB073146 NM_080927	-669807	-	TSC_hg19_v1_chr3_+_98451544 AK315111 AF119391 BC023312 NM_006100	-838712	+	TSC_hg19_v1_chr3_+_98451106 AB022918 BC001266 AK001922 BC012092	-839054	+	AK311449 NM_001850 NM_020351 AF170702 BC013581	67151	+	TSC_hg19_v1_chr3_+_99536705 AK312483 NM_032359 BC006475 BC006512 AK291392 AK124387 BC071745 CU675421	246446	+	TSC_hg19_v1_chr3_-_99595018 EU531865 EU531866 BC027860 AK225855 AK096195 NM_014890	304692	-	AK056350|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AB073146|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##NM_080927|DCBLD2|131566|discoidin, CUB and LCCL domain containing 2##AK315111|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AF119391|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC023312|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##NM_006100|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AB022918|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC001266|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK001922|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##BC012092|ST3GAL6|10402|ST3 beta-galactoside alpha-2,3-sialyltransferase 6##AK311449|COL8A1|1295|collagen, type VIII, alpha 1##NM_001850|COL8A1|1295|collagen, type VIII, alpha 1##NM_020351|COL8A1|1295|collagen, type VIII, alpha 1##AF170702|COL8A1|1295|collagen, type VIII, alpha 1##BC013581|COL8A1|1295|collagen, type VIII, alpha 1##AK312483|C3orf26|84319|chromosome 3 open reading frame 26##NM_032359|C3orf26|84319|chromosome 3 open reading frame 26##BC006475|C3orf26|84319|chromosome 3 open reading frame 26##BC006512|C3orf26|84319|chromosome 3 open reading frame 26##AK291392|C3orf26|84319|chromosome 3 open reading frame 26##AK124387|C3orf26|84319|chromosome 3 open reading frame 26##EU531865|FILIP1L|11259|filamin A interacting protein 1-like##EU531866|FILIP1L|11259|filamin A interacting protein 1-like##BC027860|FILIP1L|11259|filamin A interacting protein 1-like##AK225855|FILIP1L|11259|filamin A interacting protein 1-like##AK096195|FILIP1L|11259|filamin A interacting protein 1-like##NM_014890|FILIP1L|11259|filamin A interacting protein 1-like	0.0	
chrX	29546661	29546819	reg1038588.p2	3.387	+	AF181284 AJ243874 NM_014271	-941121	+	AK128123 NM_001017930	-1547175	-	AK057527 NM_182506 BC101307 BC101309 BC101310	-1720625	+	NM_002364 AF015766 AK313347 BC026071 AK223081	686943	+	AK057441 NM_002365	701812	+	NM_002367 AK313769 BC032852 DQ891236 DQ894421 CR541779	713414	+	AF181284|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##AJ243874|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##NM_014271|IL1RAPL1|11141|interleukin 1 receptor accessory protein-like 1##AK128123|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##NM_001017930|DCAF8L1|139425|DDB1 and CUL4 associated factor 8-like 1##AK057527|MAGEB10|139422|melanoma antigen family B, 10##NM_182506|MAGEB10|139422|melanoma antigen family B, 10##BC101307|MAGEB10|139422|melanoma antigen family B, 10##BC101309|MAGEB10|139422|melanoma antigen family B, 10##BC101310|MAGEB10|139422|melanoma antigen family B, 10##NM_002364|MAGEB2|4113|melanoma antigen family B, 2##AF015766|MAGEB2|4113|melanoma antigen family B, 2##AK313347|MAGEB2|4113|melanoma antigen family B, 2##BC026071|MAGEB2|4113|melanoma antigen family B, 2##AK223081|MAGEB2|4113|melanoma antigen family B, 2##AK057441|MAGEB3|4114|melanoma antigen family B, 3##NM_002365|MAGEB3|4114|melanoma antigen family B, 3##NM_002367|MAGEB4|4115|melanoma antigen family B, 4##AK313769|MAGEB4|4115|melanoma antigen family B, 4##BC032852|MAGEB4|4115|melanoma antigen family B, 4##DQ891236|MAGEB4|4115|melanoma antigen family B, 4##DQ894421|MAGEB4|4115|melanoma antigen family B, 4##CR541779|MAGEB4|4115|melanoma antigen family B, 4	0.0	
chr10	3871178	3871359	reg1030393.p2	3.386	+	TSC_hg19_v1_chr10_-_3827432 NM_001160124 NM_001160125 NM_001300	-43759	-	BT006778 AB528304 CU674150 DQ890752 FJ619623 U44975 AF001461 TSC_hg19_v1_chr10_-_3827402 AB017493 BC004301 BC000311 AK316596 AK293259	-43957	-	TSC_hg19_v1_chr10_-_3214979 BC111987 BC113369 AK002061 NM_001242307 NM_001242309 NM_014889	-656263	-	TSC_hg19_v1_chr10_+_4868471 BC023972 AK074211 NM_001040177 BC002862 AK302155 AB040820 AB040821 AB040822 AF263242 CU678252 AB055603	997150	+	NM_001353 TSC_hg19_v1_chr10_+_5005576	1134246	+	TSC_hg19_v1_chr10_+_5005606 AK310658 AK303435 BC020216 BC015490 M86609 U05684 DQ891484 DQ893923 AB031083 BT007197 CU677313 DQ269985 S68290	1134355	+	NM_001160124|KLF6|1316|Kruppel-like factor 6##NM_001160125|KLF6|1316|Kruppel-like factor 6##NM_001300|KLF6|1316|Kruppel-like factor 6##BT006778|KLF6|1316|Kruppel-like factor 6##DQ890752|KLF6|1316|Kruppel-like factor 6##FJ619623|KLF6|1316|Kruppel-like factor 6##U44975|KLF6|1316|Kruppel-like factor 6##AF001461|KLF6|1316|Kruppel-like factor 6##AB017493|KLF6|1316|Kruppel-like factor 6##BC004301|KLF6|1316|Kruppel-like factor 6##BC000311|KLF6|1316|Kruppel-like factor 6##AK316596|KLF6|1316|Kruppel-like factor 6##AK293259|KLF6|1316|Kruppel-like factor 6##BC111987|PITRM1|10531|pitrilysin metallopeptidase 1##BC113369|PITRM1|10531|pitrilysin metallopeptidase 1##AK002061|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242307|PITRM1|10531|pitrilysin metallopeptidase 1##NM_001242309|PITRM1|10531|pitrilysin metallopeptidase 1##NM_014889|PITRM1|10531|pitrilysin metallopeptidase 1##BC023972|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK074211|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001040177|AKR1E2|83592|aldo-keto reductase family 1, member E2##BC002862|AKR1E2|83592|aldo-keto reductase family 1, member E2##AK302155|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040820|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040821|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB040822|AKR1E2|83592|aldo-keto reductase family 1, member E2##AF263242|AKR1E2|83592|aldo-keto reductase family 1, member E2##AB055603|AKR1E2|83592|aldo-keto reductase family 1, member E2##NM_001353|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AK310658|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC020216|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BC015490|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##M86609|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##U05684|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ891484|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ893923|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##AB031083|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##BT007197|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)##DQ269985|AKR1C3|8644|aldo-keto reductase family 1, member C3 (3-alpha hydroxysteroid dehydrogenase, type II)##S68290|AKR1C1|1645|aldo-keto reductase family 1, member C1 (dihydrodiol dehydrogenase 1; 20-alpha (3-alpha)-hydroxysteroid dehydrogenase)	0.0	
chr10	76631734	76631898	reg1028619.p2	3.386	+	TSC_hg19_v1_chr10_+_76586357 AK074816 BC014143 BC048199 NM_012330 AF217500 BC150618	-45462	+	TSC_hg19_v1_chr10_+_75936554 DQ890624 EU176483	-695229	+	TSC_hg19_v1_chr10_+_75936527 BC003568 U90339	-695286	+	AY686755 NM_001003892 BC137321 BC137322	186489	-	AB027004 AB103375 NM_016364	227431	-	BC009778 AY040091 AK057012 AY674051 AK291897 AK300679 AK127886 NM_001007271 NM_001007272 NM_001007273 AK291891	237098	-	AK074816|KAT6B|23522|K(lysine) acetyltransferase 6B##BC014143|KAT6B|23522|K(lysine) acetyltransferase 6B##BC048199|KAT6B|23522|K(lysine) acetyltransferase 6B##NM_012330|KAT6B|23522|K(lysine) acetyltransferase 6B##AF217500|KAT6B|23522|K(lysine) acetyltransferase 6B##BC150618|KAT6B|23522|K(lysine) acetyltransferase 6B##DQ890624|ADK|132|adenosine kinase##EU176483|ADK|132|adenosine kinase##BC003568|ADK|132|adenosine kinase##U90339|ADK|132|adenosine kinase##AY686755|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##NM_001003892|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137321|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##BC137322|DUPD1|338599|dual specificity phosphatase and pro isomerase domain containing 1##AB027004|DUSP13|51207|dual specificity phosphatase 13##AB103375|DUSP13|51207|dual specificity phosphatase 13##NM_016364|DUSP13|51207|dual specificity phosphatase 13##BC009778|DUSP13|51207|dual specificity phosphatase 13##AY040091|DUSP13|51207|dual specificity phosphatase 13##AK057012|DUSP13|51207|dual specificity phosphatase 13##AY674051|DUSP13|51207|dual specificity phosphatase 13##AK291897|DUSP13|51207|dual specificity phosphatase 13##AK300679|DUSP13|51207|dual specificity phosphatase 13##AK127886|DUSP13|51207|dual specificity phosphatase 13##NM_001007271|DUSP13|51207|dual specificity phosphatase 13##NM_001007272|DUSP13|51207|dual specificity phosphatase 13##NM_001007273|DUSP13|51207|dual specificity phosphatase 13##AK291891|DUSP13|51207|dual specificity phosphatase 13	0.0	
chr11	22800207	22800335	reg1040502.p2	3.386	+	TSC_hg19_v1_chr11_+_22696382 CU680566 AB590780 CR450285	-103873	+	NM_005256 TSC_hg19_v1_chr11_+_22696327 U95032	-103935	+	BC013326 BC040470 NM_177553	-110618	+	TSC_hg19_v1_chr11_-_22851382 AL833119 AF527534 NM_148893	51074	-	NM_001195637	81700	-	AK127695 NM_001009909 NM_001252008 NM_001252010 TSC_hg19_v1_chr11_+_24518540 AY164460 AL832641 AY358386 BC132829 BC144177 AK309077 BC151234 HQ258382	1718378	+	CR450285|GAS2|2620|growth arrest-specific 2##NM_005256|GAS2|2620|growth arrest-specific 2##U95032|GAS2|2620|growth arrest-specific 2##BC013326|GAS2|2620|growth arrest-specific 2##BC040470|GAS2|2620|growth arrest-specific 2##NM_177553|GAS2|2620|growth arrest-specific 2##AL833119|SVIP|258010|small VCP/p97-interacting protein##AF527534|SVIP|258010|small VCP/p97-interacting protein##NM_148893|SVIP|258010|small VCP/p97-interacting protein##NM_001195637|LOC100500938|100500938|uncharacterized LOC100500938##AK127695|LUZP2|338645|leucine zipper protein 2##NM_001009909|LUZP2|338645|leucine zipper protein 2##NM_001252008|LUZP2|338645|leucine zipper protein 2##NM_001252010|LUZP2|338645|leucine zipper protein 2##AY164460|LUZP2|338645|leucine zipper protein 2##AL832641|LUZP2|338645|leucine zipper protein 2##AY358386|LUZP2|338645|leucine zipper protein 2##BC132829|LUZP2|338645|leucine zipper protein 2##BC144177|LUZP2|338645|leucine zipper protein 2##AK309077|LUZP2|338645|leucine zipper protein 2##BC151234|LUZP2|338645|leucine zipper protein 2##HQ258382|LUZP2|338645|leucine zipper protein 2	0.050411	
chr11	65222509	65222616	reg1027945.p1	3.386	+	TSC_hg19_v1_chr11_+_65193527 AF080092 AF508303	-29039	+	AK027191 TSC_hg19_v1_chr11_+_65192411 AF001893	-30162	+	TSC_hg19_v1_chr11_+_65190274 AK026198	-32284	+	TSC_hg19_v1_chr11_+_65265158 EF177381	42641	+	TSC_hg19_v1_chr11_+_65266515 BC025986 BX538238 FJ209305	43939	+	TSC_hg19_v1_chr11_+_65266869 BC104662	44237	+	AF080092|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF508303|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AK027191|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##AF001893|NEAT1|283131|nuclear paraspeckle assembly transcript 1 (non-protein coding)##EF177381|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BC025986|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)##BX538238|MALAT1|378938|metastasis associated lung adenocarcinoma transcript 1 (non-protein coding)	0.0	
chr14	53291951	53292067	reg1043646.p1	3.386	+	TSC_hg19_v1_chr14_-_53258376 NM_198066	-33624	-	TSC_hg19_v1_chr14_-_53258326 BC012179 AK090577	-33773	-	TSC_hg19_v1_chr14_+_53196923 BX647636 BC020265 BC146995 BC146998	-95052	+	TSC_hg19_v1_chr14_-_53417272 EU979385 CU675940 EU831994 EU832087	125270	-	Z24725 AF443279 TSC_hg19_v1_chr14_-_53417769 BX161467 AK291738	125711	-	TSC_hg19_v1_chr14_-_53417903 BC017327 NM_001134999 NM_001135000 NM_006832	125858	-	NM_198066|GNPNAT1|64841|glucosamine-phosphate N-acetyltransferase 1##BC012179|GNPNAT1|64841|glucosamine-phosphate N-acetyltransferase 1##AK090577|GNPNAT1|64841|glucosamine-phosphate N-acetyltransferase 1##BX647636|STYX|6815|serine/threonine/tyrosine interacting protein##BC020265|STYX|6815|serine/threonine/tyrosine interacting protein##BC146995|STYX|6815|serine/threonine/tyrosine interacting protein##BC146998|STYX|6815|serine/threonine/tyrosine interacting protein##EU979385|FERMT2|10979|fermitin family member 2##EU831994|FERMT2|10979|fermitin family member 2##EU832087|FERMT2|10979|fermitin family member 2##Z24725|FERMT2|10979|fermitin family member 2##AF443279|FERMT2|10979|fermitin family member 2##BX161467|FERMT2|10979|fermitin family member 2##AK291738|FERMT2|10979|fermitin family member 2##BC017327|FERMT2|10979|fermitin family member 2##NM_001134999|FERMT2|10979|fermitin family member 2##NM_001135000|FERMT2|10979|fermitin family member 2##NM_006832|FERMT2|10979|fermitin family member 2	0.0	
chr15	31617793	31617870	reg1031821.p1	3.386	+	NM_001243538	-94782	-	GQ502181 HM135791 NM_001252020	-164403	-	AF071787 BC033627 BC005892 BC017849 HM135790 BC058286 BC070356 NM_001252024 NM_001252030 NM_002420	-223914	-	TSC_hg19_v1_chr15_+_31619077 AF132599 BC035503 NM_015995 BC010438 BC013946 BC012741 AF150628	1507	+	AJ430383 NM_130901	329710	-	BC035668 AK308630 TSC_hg19_v1_chr15_-_32162877	544998	-	NM_001243538|LOC283710|283710|uncharacterized LOC283710##GQ502181|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135791|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252020|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF071787|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC033627|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC005892|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC017849|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##HM135790|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC058286|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##BC070356|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252024|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_001252030|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##NM_002420|TRPM1|4308|transient receptor potential cation channel, subfamily M, member 1##AF132599|KLF13|51621|Kruppel-like factor 13##BC035503|KLF13|51621|Kruppel-like factor 13##NM_015995|KLF13|51621|Kruppel-like factor 13##BC010438|KLF13|51621|Kruppel-like factor 13##BC013946|KLF13|51621|Kruppel-like factor 13##BC012741|KLF13|51621|Kruppel-like factor 13##AF150628|KLF13|51621|Kruppel-like factor 13##AJ430383|OTUD7A|161725|OTU domain containing 7A##NM_130901|OTUD7A|161725|OTU domain containing 7A##BC035668|OTUD7A|161725|OTU domain containing 7A##AK308630|OTUD7A|161725|OTU domain containing 7A	0.0	
chr15	64134602	64134756	reg1031221.p2	3.386	+	TSC_hg19_v1_chr15_-_64126148 AK296690 NM_003922	-8539	-	TSC_hg19_v1_chr15_-_64126125 AK310519 BC017384	-8559	-	TSC_hg19_v1_chr15_-_64126081 U50078	-8595	-	AB018001 AF052941 GU056176 NM_014326 TSC_hg19_v1_chr15_-_64338641 AK310967	203931	-	TSC_hg19_v1_chr15_-_64386038 AK304202 AK026528 BC008865 AK312171 NM_001014812 NM_032231	251418	-	NM_001242933 NM_003099 NM_148955 TSC_hg19_v1_chr15_+_64388198 AB209013 AK128179 AK222561 AK291752	253461	+	AK296690|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##NM_003922|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AK310519|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##U50078|HERC1|8925|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1##AB018001|DAPK2|23604|death-associated protein kinase 2##AF052941|DAPK2|23604|death-associated protein kinase 2##GU056176|DAPK2|23604|death-associated protein kinase 2##NM_014326|DAPK2|23604|death-associated protein kinase 2##AK310967|DAPK2|23604|death-associated protein kinase 2##AK304202|FAM96A|84191|family with sequence similarity 96, member A##BC008865|FAM96A|84191|family with sequence similarity 96, member A##AK312171|FAM96A|84191|family with sequence similarity 96, member A##NM_001014812|FAM96A|84191|family with sequence similarity 96, member A##NM_032231|FAM96A|84191|family with sequence similarity 96, member A##NM_001242933|SNX1|6642|sorting nexin 1##NM_003099|SNX1|6642|sorting nexin 1##NM_148955|SNX1|6642|sorting nexin 1##AB209013|SNX1|6642|sorting nexin 1##AK128179|SNX1|6642|sorting nexin 1##AK222561|SNX1|6642|sorting nexin 1##AK291752|SNX1|6642|sorting nexin 1	0.0	
chr16	30457144	30457211	reg1034961.p2	3.386	+	CR457335 TSC_hg19_v1_chr16_-_30441339 AK024843 AF212242 AF210430 AY453409 BC001344 NM_024096	-15838	-	TSC_hg19_v1_chr16_+_30419371 AF242768	-37758	+	TSC_hg19_v1_chr16_+_30418926 BC026192 AK311157 AK001405 BC011870	-38136	+	BC016643 BC002381 U43286 TSC_hg19_v1_chr16_-_30457196 AK092003 AK303275 AX747304	5	-	TSC_hg19_v1_chr16_-_30457197 AK093889 AX748354 NM_012248	52	-	TSC_hg19_v1_chr16_+_30484003 NM_001114380 NM_002209 AX794822 AX794826 AK314246	26823	+	CR457335|DCTPP1|79077|dCTP pyrophosphatase 1##AK024843|DCTPP1|79077|dCTP pyrophosphatase 1##AF212242|DCTPP1|79077|dCTP pyrophosphatase 1##AF210430|DCTPP1|79077|dCTP pyrophosphatase 1##AY453409|DCTPP1|79077|dCTP pyrophosphatase 1##BC001344|DCTPP1|79077|dCTP pyrophosphatase 1##NM_024096|DCTPP1|79077|dCTP pyrophosphatase 1##AF242768|ZNF771|51333|zinc finger protein 771##BC026192|ZNF771|51333|zinc finger protein 771##BC011870|ZNF771|51333|zinc finger protein 771##BC016643|SEPHS2|22928|selenophosphate synthetase 2##BC002381|SEPHS2|22928|selenophosphate synthetase 2##U43286|SEPHS2|22928|selenophosphate synthetase 2##AK092003|SEPHS2|22928|selenophosphate synthetase 2##AK303275|SEPHS2|22928|selenophosphate synthetase 2##AK093889|SEPHS2|22928|selenophosphate synthetase 2##NM_012248|SEPHS2|22928|selenophosphate synthetase 2##NM_001114380|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##NM_002209|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)##AK314246|ITGAL|3683|integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide)	0.0	
chr1	66767004	66767130	reg1040183.p2	3.386	+	AB209081 NM_001037340 AK290006	-308664	+	AK289969 NM_002600 L20966	-508208	+	NM_001037341 CR749667 BC071607 BC036108	-508872	+	L12685 NM_001037339 M97515 L12686 TSC_hg19_v1_chr1_+_66797927	30786	+	TSC_hg19_v1_chr1_+_66798096 AK294441	31028	+	AK299941 AK298970 NM_032291 TSC_hg19_v1_chr1_+_66999843 AB210039 AL136561	232817	+	AB209081|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037340|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK290006|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK289969|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_002600|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L20966|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037341|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##CR749667|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC071607|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##BC036108|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##NM_001037339|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##M97515|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##L12686|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK294441|PDE4B|5142|phosphodiesterase 4B, cAMP-specific##AK299941|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AK298970|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##NM_032291|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AB210039|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1##AL136561|SGIP1|84251|SH3-domain GRB2-like (endophilin) interacting protein 1	0.0	
chr2	64603163	64603230	reg1040757.p2	3.386	+	TSC_hg19_v1_chr2_-_64371555 AK022261 BC063611 BC050533 AK312441 BC050019 NM_020651	-231672	-	TSC_hg19_v1_chr2_-_64246563 AK292669 AK292889	-356691	-	BC030275 NM_001005739 NM_016516 TSC_hg19_v1_chr2_-_64246305	-356934	-	TSC_hg19_v1_chr2_+_64681295 NM_014181	78104	+	TSC_hg19_v1_chr2_+_64681654 BC062691 AK314656 BC036082 AF161508 AB528153 AM393169 CU687590	78452	+	TSC_hg19_v1_chr2_+_64751481 NM_001002243 NM_017657 NM_203437 BC047529 AK000087 AK222821	148288	+	BC063611|PELI1|57162|pellino homolog 1 (Drosophila)##BC050533|PELI1|57162|pellino homolog 1 (Drosophila)##AK312441|PELI1|57162|pellino homolog 1 (Drosophila)##BC050019|PELI1|57162|pellino homolog 1 (Drosophila)##NM_020651|PELI1|57162|pellino homolog 1 (Drosophila)##AK292669|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##AK292889|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##BC030275|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_001005739|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_016516|VPS54|51542|vacuolar protein sorting 54 homolog (S. cerevisiae)##NM_014181|LGALSL|29094|lectin, galactoside-binding-like##BC062691|LGALSL|29094|lectin, galactoside-binding-like##AK314656|LGALSL|29094|lectin, galactoside-binding-like##BC036082|LGALSL|29094|lectin, galactoside-binding-like##AF161508|LGALSL|29094|lectin, galactoside-binding-like##AM393169|LGALSL|29094|lectin, galactoside-binding-like##NM_001002243|AFTPH|54812|aftiphilin##NM_017657|AFTPH|54812|aftiphilin##NM_203437|AFTPH|54812|aftiphilin##BC047529|AFTPH|54812|aftiphilin##AK000087|AFTPH|54812|aftiphilin##AK222821|AFTPH|54812|aftiphilin	0.0	
chr2	64923244	64923349	reg1038687.p2	3.386	+	TSC_hg19_v1_chr2_-_64881051 D50917 NM_014755 AK311117	-42249	-	BC074788 BC074789 BC101639 BC101641 TSC_hg19_v1_chr2_-_64880905	-42447	-	TSC_hg19_v1_chr2_+_64751580 AL833962	-171694	+	TSC_hg19_v1_chr2_-_65090764 AK097952	167445	-	TSC_hg19_v1_chr2_-_65159574 BC037562	236281	-	TSC_hg19_v1_chr2_+_65215619 NM_001193493 AK295687	292304	+	D50917|SERTAD2|9792|SERTA domain containing 2##NM_014755|SERTAD2|9792|SERTA domain containing 2##AK311117|SERTAD2|9792|SERTA domain containing 2##BC074788|SERTAD2|9792|SERTA domain containing 2##BC074789|SERTAD2|9792|SERTA domain containing 2##BC101639|SERTAD2|9792|SERTA domain containing 2##BC101641|SERTAD2|9792|SERTA domain containing 2##AL833962|AFTPH|54812|aftiphilin##BC037562|LOC400958|400958|uncharacterized LOC400958##NM_001193493|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4##AK295687|SLC1A4|6509|solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	0.0	
chr7	101691323	101691417	reg1034762.p1	3.386	+	M74099 NM_181552	-230489	+	TSC_hg19_v1_chr7_+_101459285 NM_001202543 NM_001202544 NM_001202545 NM_001913 NM_181500 AK222832 AK303151 NM_001202546 AK125097 BC066592 L12579 AK297548 BC012323 AK122726 BC025422 AB462994	-232161	+	BC002778 NM_138403	-418795	-	TSC_hg19_v1_chr7_+_101928390 NM_020979	237027	+	TSC_hg19_v1_chr7_+_101928431 AB000520	237073	+	NM_001146210	305518	-	M74099|CUX1|1523|cut-like homeobox 1##NM_181552|CUX1|1523|cut-like homeobox 1##NM_001202543|CUX1|1523|cut-like homeobox 1##NM_001202544|CUX1|1523|cut-like homeobox 1##NM_001202545|CUX1|1523|cut-like homeobox 1##NM_001913|CUX1|1523|cut-like homeobox 1##NM_181500|CUX1|1523|cut-like homeobox 1##AK222832|CUX1|1523|cut-like homeobox 1##AK303151|CUX1|1523|cut-like homeobox 1##NM_001202546|CUX1|1523|cut-like homeobox 1##AK125097|CUX1|1523|cut-like homeobox 1##BC066592|CUX1|1523|cut-like homeobox 1##L12579|CUX1|1523|cut-like homeobox 1##AK297548|CUX1|1523|cut-like homeobox 1##BC012323|CUX1|1523|cut-like homeobox 1##AK122726|CUX1|1523|cut-like homeobox 1##BC025422|CUX1|1523|cut-like homeobox 1##BC002778|MYL10|93408|myosin, light chain 10, regulatory##NM_138403|MYL10|93408|myosin, light chain 10, regulatory##NM_020979|SH2B2|10603|SH2B adaptor protein 2##AB000520|SH2B2|10603|SH2B adaptor protein 2##NM_001146210|SPDYE6|729597|speedy homolog E6 (Xenopus laevis)	0.022461	
chr8	66863875	66864055	reg1027018.p1	3.386	+	TSC_hg19_v1_chr8_-_66754300 AK292680	-109673	-	NM_001242318	-109997	-	HQ258418 AK290801 BC058025 BC126360 NM_002603 U67932	-162714	-	NM_033105 BC016742 AF368276 AL133660	69854	+	AK091310 AX746908 AJ243488 AJ243489 AJ277493 AJ431704 NM_033058 NM_184085 NM_184086 NM_184087 TSC_hg19_v1_chr8_+_67039363 AJ291712 BC007750 AK091728 AX747148 CU675793 BT007212	175375	+	BC002599 BC011031 AK075431 NM_000756	226802	-	AK292680|PDE7A|5150|phosphodiesterase 7A##NM_001242318|PDE7A|5150|phosphodiesterase 7A##HQ258418|PDE7A|5150|phosphodiesterase 7A##AK290801|PDE7A|5150|phosphodiesterase 7A##BC058025|PDE7A|5150|phosphodiesterase 7A##BC126360|PDE7A|5150|phosphodiesterase 7A##NM_002603|PDE7A|5150|phosphodiesterase 7A##U67932|PDE7A|5150|phosphodiesterase 7A##NM_033105|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##BC016742|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AF368276|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AL133660|DNAJC5B|85479|DnaJ (Hsp40) homolog, subfamily C, member 5 beta##AK091310|TRIM55|84675|tripartite motif containing 55##AJ243488|TRIM55|84675|tripartite motif containing 55##AJ243489|TRIM55|84675|tripartite motif containing 55##AJ277493|TRIM55|84675|tripartite motif containing 55##AJ431704|TRIM55|84675|tripartite motif containing 55##NM_033058|TRIM55|84675|tripartite motif containing 55##NM_184085|TRIM55|84675|tripartite motif containing 55##NM_184086|TRIM55|84675|tripartite motif containing 55##NM_184087|TRIM55|84675|tripartite motif containing 55##AJ291712|TRIM55|84675|tripartite motif containing 55##BC007750|TRIM55|84675|tripartite motif containing 55##AK091728|TRIM55|84675|tripartite motif containing 55##BT007212|TRIM55|84675|tripartite motif containing 55##BC002599|CRH|1392|corticotropin releasing hormone##BC011031|CRH|1392|corticotropin releasing hormone##AK075431|CRH|1392|corticotropin releasing hormone##NM_000756|CRH|1392|corticotropin releasing hormone	0.0	
chr9	100963539	100963653	reg1044909.p1	3.386	+	TSC_hg19_v1_chr9_-_100954922 AK292788 BC011690 AB209809 NM_052820	-8663	-	NM_003389	-28423	-	TSC_hg19_v1_chr9_-_100881526 AK055833	-82052	-	AK026105 CU687204 AK298575 AB209721 AB449882 AF318370 AK131290 TSC_hg19_v1_chr9_-_101017885 BC071978 AY026527	54125	-	TSC_hg19_v1_chr9_-_101018013 NM_018421	54408	-	DQ891731 DQ894908 CU690042 TSC_hg19_v1_chr9_-_101471213 AF074483 AF099033 AJ012188 AB384741 AF069755 AF056085 NM_005458 BC035071	507589	-	AK292788|CORO2A|7464|coronin, actin binding protein, 2A##BC011690|CORO2A|7464|coronin, actin binding protein, 2A##AB209809|CORO2A|7464|coronin, actin binding protein, 2A##NM_052820|CORO2A|7464|coronin, actin binding protein, 2A##NM_003389|CORO2A|7464|coronin, actin binding protein, 2A##AK055833|TRIM14|9830|tripartite motif containing 14##AK026105|TBC1D2|55357|TBC1 domain family, member 2##AK298575|TBC1D2|55357|TBC1 domain family, member 2##AB209721|TBC1D2|55357|TBC1 domain family, member 2##AB449882|TBC1D2|55357|TBC1 domain family, member 2##AF318370|TBC1D2|55357|TBC1 domain family, member 2##AK131290|TBC1D2|55357|TBC1 domain family, member 2##BC071978|TBC1D2|55357|TBC1 domain family, member 2##AY026527|TBC1D2|55357|TBC1 domain family, member 2##NM_018421|TBC1D2|55357|TBC1 domain family, member 2##DQ891731|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##DQ894908|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF074483|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF099033|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AJ012188|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF069755|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##AF056085|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##NM_005458|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2##BC035071|GABBR2|9568|gamma-aminobutyric acid (GABA) B receptor, 2	0.0	
chr9	131965352	131965423	reg1029327.p2	3.386	+	TSC_hg19_v1_chr9_-_131940541 NM_203434	-24847	-	TSC_hg19_v1_chr9_-_131940534 BC064028	-24880	-	AK310328 TSC_hg19_v1_chr9_+_131902359	-63077	+	AK092588 AX747616 NM_001012715 BC132699 BC132701	117908	+	TSC_hg19_v1_chr9_+_132251360 BC044229 AK024177	285967	+	TSC_hg19_v1_chr9_+_132251404 BC019073 AK092686	286054	+	NM_203434|IER5L|389792|immediate early response 5-like##BC064028|IER5L|389792|immediate early response 5-like##AK310328|PPP2R4|5524|protein phosphatase 2A activator, regulatory subunit 4##AK092588|C9orf106|414318|chromosome 9 open reading frame 106##NM_001012715|C9orf106|414318|chromosome 9 open reading frame 106##BC132699|C9orf106|414318|chromosome 9 open reading frame 106##BC132701|C9orf106|414318|chromosome 9 open reading frame 106##BC044229|LOC100506190|100506190|uncharacterized LOC100506190##AK024177|LOC100506190|100506190|uncharacterized LOC100506190##BC019073|LOC100506190|100506190|uncharacterized LOC100506190##AK092686|LOC100506190|100506190|uncharacterized LOC100506190	0.048086	
chr11	12074887	12074994	reg1038442.p1	3.385	+	TSC_hg19_v1_chr11_-_12030884 AB057591 NM_013253	-44038	-	TSC_hg19_v1_chr11_-_12030877 AY358378	-44082	-	AK289897 TSC_hg19_v1_chr11_-_12030788	-44161	-	TSC_hg19_v1_chr11_+_12132122 BC044577 NM_014632 BC015755 AB018293	57190	+	AK123671 NM_032867	233506	+	TSC_hg19_v1_chr11_+_12399158 NM_018222 AK098504 AF237771 AK022316 BC016713 AK001655 BC014535 AB464001 EU832601 CU677039 CU677693 AF325830	324169	+	AB057591|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##NM_013253|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AY358378|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##AK289897|DKK3|27122|dickkopf 3 homolog (Xenopus laevis)##BC044577|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##NM_014632|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##BC015755|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AB018293|MICAL2|9645|microtubule associated monoxygenase, calponin and LIM domain containing 2##AK123671|MICALCL|84953|MICAL C-terminal like##NM_032867|MICALCL|84953|MICAL C-terminal like##NM_018222|PARVA|55742|parvin, alpha##AK098504|PARVA|55742|parvin, alpha##AF237771|PARVA|55742|parvin, alpha##AK022316|PARVA|55742|parvin, alpha##BC016713|PARVA|55742|parvin, alpha##AK001655|PARVA|55742|parvin, alpha##BC014535|PARVA|55742|parvin, alpha##EU832601|PARVA|55742|parvin, alpha##AF325830|PARVA|55742|parvin, alpha	0.019601	
chr1	37432082	37432149	reg1039185.p2	3.385	+	NM_000760 NM_156039 NM_172313	-483201	-	BC040954 TSC_hg19_v1_chr1_-_36948515 AK307242 X55720 X55721 M59818 M59819 M59820 BC053585	-483631	-	TSC_hg19_v1_chr1_-_36929984 AB049946 AB209905 AK021626 BC031336 AF265439 AK315441 AK302633 NM_031280	-502156	-	AJ299451 U16127 AJ249210 TSC_hg19_v1_chr1_-_37499794 NM_000831	67660	-	TSC_hg19_v1_chr1_+_37940118 NM_025079	507982	+	TSC_hg19_v1_chr1_+_37940140 AK026884	508035	+	NM_000760|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_156039|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##NM_172313|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC040954|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AK307242|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55720|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##X55721|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59818|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59819|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##M59820|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##BC053585|CSF3R|1441|colony stimulating factor 3 receptor (granulocyte)##AB049946|MRPS15|64960|mitochondrial ribosomal protein S15##AB209905|MRPS15|64960|mitochondrial ribosomal protein S15##AK021626|MRPS15|64960|mitochondrial ribosomal protein S15##BC031336|MRPS15|64960|mitochondrial ribosomal protein S15##AF265439|MRPS15|64960|mitochondrial ribosomal protein S15##AK315441|MRPS15|64960|mitochondrial ribosomal protein S15##AK302633|MRPS15|64960|mitochondrial ribosomal protein S15##NM_031280|MRPS15|64960|mitochondrial ribosomal protein S15##AJ299451|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##U16127|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##AJ249210|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_000831|GRIK3|2899|glutamate receptor, ionotropic, kainate 3##NM_025079|ZC3H12A|80149|zinc finger CCCH-type containing 12A##AK026884|ZC3H12A|80149|zinc finger CCCH-type containing 12A	0.0	
chr14	80830779	80830875	reg1036846.p1	3.385	+	AK292210 NM_000793	-133431	-	BC136514 AB041843 BC074882 BC063118 NM_001007023 NM_001242502 NM_001242503 U53506 AF093774 NM_013989	-152923	-	NM_001105250 NM_138970 AK056530 BC059368 BC068469	-1085123	+	NM_152446	575056	-	BC045834 AK309833 TSC_hg19_v1_chr14_-_81408073	577231	-	AK303378 BC024205 NM_000369 NM_001018036 NM_001142626 M31774 BC108653 BC009237 M73747 M32215 BC063613 AB209207 BC120972 BC120973 BC127628 BC127629 BC141970 S49816 AB384880 AY429111 CU687778 S45272	591039	+	AK292210|DIO2|1734|deiodinase, iodothyronine, type II##NM_000793|DIO2|1734|deiodinase, iodothyronine, type II##BC136514|DIO2|1734|deiodinase, iodothyronine, type II##AB041843|DIO2|1734|deiodinase, iodothyronine, type II##BC074882|DIO2|1734|deiodinase, iodothyronine, type II##BC063118|DIO2|1734|deiodinase, iodothyronine, type II##NM_001007023|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242502|DIO2|1734|deiodinase, iodothyronine, type II##NM_001242503|DIO2|1734|deiodinase, iodothyronine, type II##U53506|DIO2|1734|deiodinase, iodothyronine, type II##AF093774|DIO2|1734|deiodinase, iodothyronine, type II##NM_013989|DIO2|1734|deiodinase, iodothyronine, type II##NM_001105250|NRXN3|9369|neurexin 3##NM_138970|NRXN3|9369|neurexin 3##AK056530|NRXN3|9369|neurexin 3##BC059368|NRXN3|9369|neurexin 3##BC068469|NRXN3|9369|neurexin 3##NM_152446|CEP128|145508|centrosomal protein 128kDa##BC045834|CEP128|145508|centrosomal protein 128kDa##AK309833|CEP128|145508|centrosomal protein 128kDa##BC024205|TSHR|7253|thyroid stimulating hormone receptor##NM_000369|TSHR|7253|thyroid stimulating hormone receptor##NM_001018036|TSHR|7253|thyroid stimulating hormone receptor##NM_001142626|TSHR|7253|thyroid stimulating hormone receptor##M31774|TSHR|7253|thyroid stimulating hormone receptor##BC108653|TSHR|7253|thyroid stimulating hormone receptor##BC009237|TSHR|7253|thyroid stimulating hormone receptor##M73747|TSHR|7253|thyroid stimulating hormone receptor##M32215|TSHR|7253|thyroid stimulating hormone receptor##BC063613|TSHR|7253|thyroid stimulating hormone receptor##AB209207|TSHR|7253|thyroid stimulating hormone receptor##BC120972|TSHR|7253|thyroid stimulating hormone receptor##BC120973|TSHR|7253|thyroid stimulating hormone receptor##BC127628|TSHR|7253|thyroid stimulating hormone receptor##BC127629|TSHR|7253|thyroid stimulating hormone receptor##BC141970|TSHR|7253|thyroid stimulating hormone receptor##S49816|TSHR|7253|thyroid stimulating hormone receptor##AY429111|TSHR|7253|thyroid stimulating hormone receptor##S45272|TSHR|7253|thyroid stimulating hormone receptor	0.59394	CTCF.p2:-7:0.594
chr14	94437428	94437609	reg1011616.p2	3.385	+	AB056723 NM_016150	-13752	-	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	-43810	+	NM_001207071 NM_138344 AK093387 AX748092	-52270	+	AK303686 TSC_hg19_v1_chr14_-_94442905	5390	-	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	5558	-	TSC_hg19_v1_chr14_+_94492685 BC009615 BC068058 NM_023112	55185	+	AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2##BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2	0.0	
chr17	5129460	5129625	reg1035785.p2	3.385	+	TSC_hg19_v1_chr17_+_5095367 AK021878 BC029580	-34162	+	TSC_hg19_v1_chr17_-_5095151 AK131271 NM_032530	-34369	-	AY143550 NM_004505 X63546 X63547	-97856	+	DQ778084 HQ258063 HQ258597 AK297035 BC130554 BC130556 BC144395 NM_207103 BC127925 AK057142 AY358809 AK310145	8559	-	TSC_hg19_v1_chr17_+_5185578 NM_001083585 NM_004703 AK314183 AK297535 BC041700 BC032435 X91141 BC014025 BC065242 BC018742 AK310932 X77723 AF098638	56124	+	AK308142 TSC_hg19_v1_chr17_-_5322979 BC000335 AK225247 AK298158 AK299000	193383	-	AK021878|LOC100130950|100130950|uncharacterized LOC100130950##BC029580|LOC100130950|100130950|uncharacterized LOC100130950##AK131271|ZNF594|84622|zinc finger protein 594##NM_032530|ZNF594|84622|zinc finger protein 594##AY143550|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##NM_004505|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63546|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##X63547|USP6|9098|ubiquitin specific peptidase 6 (Tre-2 oncogene)##DQ778084|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258063|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##HQ258597|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK297035|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130554|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC130556|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC144395|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_207103|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##BC127925|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK057142|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AY358809|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##AK310145|SCIMP|388325|SLP adaptor and CSK interacting membrane protein##NM_001083585|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##NM_004703|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK314183|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK297535|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC041700|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC032435|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X91141|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC065242|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##BC018742|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK310932|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##X77723|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AF098638|RABEP1|9135|rabaptin, RAB GTPase binding effector protein 1##AK308142|NUP88|4927|nucleoporin 88kDa##BC000335|NUP88|4927|nucleoporin 88kDa##AK225247|NUP88|4927|nucleoporin 88kDa##AK298158|NUP88|4927|nucleoporin 88kDa##AK299000|NUP88|4927|nucleoporin 88kDa	0.0	
chr17	65566218	65566318	reg1037484.p2	3.385	+	BC007905 NM_012417 NM_181671	-192345	+	AK290838 TSC_hg19_v1_chr17_+_65373587	-192680	+	TSC_hg19_v1_chr17_+_65373455 BC037261	-192859	+	TSC_hg19_v1_chr17_+_65714050 BC064404 AK023702 AK299483 NM_015462 AY598333	147782	+	TSC_hg19_v1_chr17_+_65821632 AK297281 BC037422 NM_004459 NM_182641 AB032251	255434	+	AK293224 TSC_hg19_v1_chr17_+_65822221	255949	+	BC007905|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_012417|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##NM_181671|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##AK290838|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC037261|PITPNC1|26207|phosphatidylinositol transfer protein, cytoplasmic 1##BC064404|NOL11|25926|nucleolar protein 11##AK023702|NOL11|25926|nucleolar protein 11##AK299483|NOL11|25926|nucleolar protein 11##NM_015462|NOL11|25926|nucleolar protein 11##AY598333|NOL11|25926|nucleolar protein 11##AK297281|BPTF|2186|bromodomain PHD finger transcription factor##BC037422|BPTF|2186|bromodomain PHD finger transcription factor##NM_004459|BPTF|2186|bromodomain PHD finger transcription factor##NM_182641|BPTF|2186|bromodomain PHD finger transcription factor##AB032251|BPTF|2186|bromodomain PHD finger transcription factor##AK293224|BPTF|2186|bromodomain PHD finger transcription factor	0.0	
chr17	76730931	76731026	reg1036497.p1	3.385	+	TSC_hg19_v1_chr17_-_76719676 AK293894	-11227	-	AK316277 TSC_hg19_v1_chr17_-_76719649	-11331	-	NM_173628	-157503	-	TSC_hg19_v1_chr17_-_76732958 AK311535	2020	-	AB590939 EU832306 EU832390 BC050452 BC038385 TSC_hg19_v1_chr17_-_76778380 AK296914 AK307917 M85169 NM_004762 NM_017456	47375	-	BC071582 TSC_hg19_v1_chr17_-_76836610	105672	-	AK293894|CYTH1|9267|cytohesin 1##AK316277|CYTH1|9267|cytohesin 1##NM_173628|DNAH17|8632|dynein, axonemal, heavy chain 17##EU832306|CYTH1|9267|cytohesin 1##EU832390|CYTH1|9267|cytohesin 1##BC050452|CYTH1|9267|cytohesin 1##BC038385|CYTH1|9267|cytohesin 1##AK296914|CYTH1|9267|cytohesin 1##AK307917|CYTH1|9267|cytohesin 1##M85169|CYTH1|9267|cytohesin 1##NM_004762|CYTH1|9267|cytohesin 1##NM_017456|CYTH1|9267|cytohesin 1##BC071582|USP36|57602|ubiquitin specific peptidase 36	0.05618	
chr1	97483598	97483694	reg1036958.p1	3.385	+	BC030757 TSC_hg19_v1_chr1_+_97260652	-223063	+	NM_021190 TSC_hg19_v1_chr1_+_97187343 AK092216 AB051232 AK299755 AK299922 AB209266 AF530580 AF530581 AF176085 AK299897 BC016582 AB051233	-296362	+	AB055763 TSC_hg19_v1_chr1_-_97145197	-338450	-	TSC_hg19_v1_chr1_-_98386512 AB003063 BT006740 CU678939 BC008379	902843	-	TSC_hg19_v1_chr1_-_98386557 BC131777 BC131778 BC064027 AK297515 U09178 BC108742 U20938 AK291217	902913	-	TSC_hg19_v1_chr1_-_98386605 NM_000110 NM_001160301	902960	-	NM_021190|PTBP2|58155|polypyrimidine tract binding protein 2##AK092216|PTBP2|58155|polypyrimidine tract binding protein 2##AB051232|PTBP2|58155|polypyrimidine tract binding protein 2##AK299755|PTBP2|58155|polypyrimidine tract binding protein 2##AK299922|PTBP2|58155|polypyrimidine tract binding protein 2##AB209266|PTBP2|58155|polypyrimidine tract binding protein 2##AF530580|PTBP2|58155|polypyrimidine tract binding protein 2##AF530581|PTBP2|58155|polypyrimidine tract binding protein 2##AF176085|PTBP2|58155|polypyrimidine tract binding protein 2##AK299897|PTBP2|58155|polypyrimidine tract binding protein 2##BC016582|PTBP2|58155|polypyrimidine tract binding protein 2##AB051233|PTBP2|58155|polypyrimidine tract binding protein 2##AB003063|DPYD|1806|dihydropyrimidine dehydrogenase##BT006740|DPYD|1806|dihydropyrimidine dehydrogenase##BC008379|DPYD|1806|dihydropyrimidine dehydrogenase##BC131777|DPYD|1806|dihydropyrimidine dehydrogenase##BC131778|DPYD|1806|dihydropyrimidine dehydrogenase##BC064027|DPYD|1806|dihydropyrimidine dehydrogenase##AK297515|DPYD|1806|dihydropyrimidine dehydrogenase##U09178|DPYD|1806|dihydropyrimidine dehydrogenase##BC108742|DPYD|1806|dihydropyrimidine dehydrogenase##U20938|DPYD|1806|dihydropyrimidine dehydrogenase##AK291217|DPYD|1806|dihydropyrimidine dehydrogenase##NM_000110|DPYD|1806|dihydropyrimidine dehydrogenase##NM_001160301|DPYD|1806|dihydropyrimidine dehydrogenase	0.535555	CTCF.p2:27:0.536
chr20	30523292	30523427	reg1035140.p2	3.385	+	TSC_hg19_v1_chr20_+_30467627 BC036213 AK303963 AK302360 AK302806	-55746	+	AK093491 AX748163 NM_001008409 BC068593 BC104024 BC104025	-64827	+	BC056911 AK097430 NM_080611	-64944	-	TSC_hg19_v1_chr20_-_30539781 BC001856 AB528566	16401	-	TSC_hg19_v1_chr20_-_30539818 BC009334 AK312021	16467	-	TSC_hg19_v1_chr20_-_30539856 NM_030815 AY286301	16512	-	BC036213|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##AK303963|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##AK302360|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##AK302806|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##AK093491|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##NM_001008409|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##BC068593|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##BC104024|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##BC104025|TTLL9|164395|tubulin tyrosine ligase-like family, member 9##BC056911|DUSP15|128853|dual specificity phosphatase 15##AK097430|C20orf57|83747|chromosome 20 open reading frame 57##NM_080611|DUSP15|128853|dual specificity phosphatase 15##BC001856|PDRG1|81572|p53 and DNA-damage regulated 1##BC009334|PDRG1|81572|p53 and DNA-damage regulated 1##AK312021|PDRG1|81572|p53 and DNA-damage regulated 1##NM_030815|PDRG1|81572|p53 and DNA-damage regulated 1##AY286301|PDRG1|81572|p53 and DNA-damage regulated 1	0.015089	
chr5	66779654	66779808	reg1042246.p1	3.385	+	BC109069 BC109070 D83597 NM_005582 AK313177	-287131	-	AY830839 BC018692 NM_015183	-655128	+	TSC_hg19_v1_chr5_+_65892187 NM_001164664 NM_198828 BC033215	-887523	+	TSC_hg19_v1_chr5_+_67511583 NM_181523	731849	+	TSC_hg19_v1_chr5_+_67511602 BC094795	731876	+	AF279367 NM_181524 TSC_hg19_v1_chr5_+_67584336 AK000121	804563	+	BC109069|CD180|4064|CD180 molecule##BC109070|CD180|4064|CD180 molecule##D83597|CD180|4064|CD180 molecule##NM_005582|CD180|4064|CD180 molecule##AK313177|CD180|4064|CD180 molecule##AY830839|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC018692|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_015183|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_001164664|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_198828|MAST4|375449|microtubule associated serine/threonine kinase family member 4##BC033215|MAST4|375449|microtubule associated serine/threonine kinase family member 4##NM_181523|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##BC094795|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AF279367|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##NM_181524|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)##AK000121|PIK3R1|5295|phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	0.0	
chr6	124123519	124123699	reg1002907.p1	3.385	+	U18985 BC139910 AK291867 BC012590 BC029393 BC057222 BC070290 AJ489257 AK307619 NM_001251987 NM_006073	-165520	-	BC101377 BC101376 NM_001010852	-806029	+	TSC_hg19_v1_chr6_+_123317379 AK295158	-806226	+	NM_001040214 NM_153355 TSC_hg19_v1_chr6_+_124125147 AB070452 BC035062 AK310763 AK309385	1595	+	AK093417 AX748113 BC026087 NM_152553	1180902	+	TSC_hg19_v1_chr6_+_125474909 NM_001003396 NM_001003397 NM_003287 AK291866 U44427 BC002375 AK291872 AF208012 AK291887	1351330	+	U18985|TRDN|10345|triadin##BC139910|TRDN|10345|triadin##AK291867|TRDN|10345|triadin##BC012590|TRDN|10345|triadin##BC029393|TRDN|10345|triadin##BC057222|TRDN|10345|triadin##BC070290|TRDN|10345|triadin##AJ489257|TRDN|10345|triadin##AK307619|TRDN|10345|triadin##NM_001251987|TRDN|10345|triadin##NM_006073|TRDN|10345|triadin##BC101377|CLVS2|134829|clavesin 2##BC101376|CLVS2|134829|clavesin 2##NM_001010852|CLVS2|134829|clavesin 2##AK295158|CLVS2|134829|clavesin 2##NM_001040214|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##NM_153355|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AB070452|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##BC035062|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK310763|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK309385|NKAIN2|154215|Na+/K+ transporting ATPase interacting 2##AK093417|RNF217|154214|ring finger protein 217##BC026087|RNF217|154214|ring finger protein 217##NM_152553|RNF217|154214|ring finger protein 217##NM_001003396|TPD52L1|7164|tumor protein D52-like 1##NM_001003397|TPD52L1|7164|tumor protein D52-like 1##NM_003287|TPD52L1|7164|tumor protein D52-like 1##AK291866|TPD52L1|7164|tumor protein D52-like 1##U44427|TPD52L1|7164|tumor protein D52-like 1##BC002375|TPD52L1|7164|tumor protein D52-like 1##AK291872|TPD52L1|7164|tumor protein D52-like 1##AF208012|TPD52L1|7164|tumor protein D52-like 1##AK291887|TPD52L1|7164|tumor protein D52-like 1	0.0	
chr8	128575787	128575853	reg1035409.p1	3.385	+	DQ486513 NM_001159542	-147964	+	NM_174911 TSC_hg19_v1_chr8_-_127570724	-1005096	-	BC052957 TSC_hg19_v1_chr8_-_127570637 AK292824 AJ417849	-1005265	-	TSC_hg19_v1_chr8_+_128748315 NM_002467 V00568	172505	+	AK303921 TSC_hg19_v1_chr8_+_128748476 AK312883 BC000917 K02276 BC000141	172670	+	TSC_hg19_v1_chr8_+_128806786 M34429 M34430 M34431 M34432 M34428 M25803	230963	+	DQ486513|POU5F1B|5462|POU class 5 homeobox 1B##NM_001159542|POU5F1B|5462|POU class 5 homeobox 1B##NM_174911|FAM84B|157638|family with sequence similarity 84, member B##BC052957|FAM84B|157638|family with sequence similarity 84, member B##AK292824|FAM84B|157638|family with sequence similarity 84, member B##AJ417849|FAM84B|157638|family with sequence similarity 84, member B##NM_002467|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##V00568|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK303921|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##AK312883|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000917|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##K02276|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##BC000141|MYC|4609|v-myc myelocytomatosis viral oncogene homolog (avian)##M34429|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34430|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34431|PVT1|5820|Pvt1 oncogene (non-protein coding)##M34428|PVT1|5820|Pvt1 oncogene (non-protein coding)##M25803|PVT1|5820|Pvt1 oncogene (non-protein coding)	0.0	
chr8	42129276	42129449	reg1027172.p2	3.385	+	BC090865 TSC_hg19_v1_chr8_+_42128868 AF080158 AK298241 AB209090 BC108694 AK290952 BC144080 BX648165	-447	+	TSC_hg19_v1_chr8_+_42128835 AK302723 AK303294 AK316418 BC006231 AK091297 AK309052	-527	+	TSC_hg19_v1_chr8_+_42128832 AK303528	-535	+	NM_002690 AK223537 TSC_hg19_v1_chr8_+_42196014 BC100288 AK294025 AK314976 D29013 M13140 BC106909 AB464039 CR536503 CR541802 L11607	66695	+	AB017788 BC107046 BC107047 AF177397 NM_014420 AK311714 AK301609	105290	-	NM_001135694 NM_005662 TSC_hg19_v1_chr8_+_42249355	119956	+	BC090865|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AF080158|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK298241|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AB209090|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC108694|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK290952|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC144080|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BX648165|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK302723|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK303294|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK316418|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##BC006231|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK091297|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##AK303528|IKBKB|3551|inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta##NM_002690|POLB|5423|polymerase (DNA directed), beta##AK223537|POLB|5423|polymerase (DNA directed), beta##BC100288|POLB|5423|polymerase (DNA directed), beta##AK294025|POLB|5423|polymerase (DNA directed), beta##AK314976|POLB|5423|polymerase (DNA directed), beta##D29013|POLB|5423|polymerase (DNA directed), beta##M13140|POLB|5423|polymerase (DNA directed), beta##BC106909|POLB|5423|polymerase (DNA directed), beta##CR536503|POLB|5423|polymerase (DNA directed), beta##CR541802|POLB|5423|polymerase (DNA directed), beta##L11607|POLB|5423|polymerase (DNA directed), beta##AB017788|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##BC107046|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##BC107047|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##AF177397|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##NM_014420|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##AK301609|DKK4|27121|dickkopf homolog 4 (Xenopus laevis)##NM_001135694|VDAC3|7419|voltage-dependent anion channel 3##NM_005662|VDAC3|7419|voltage-dependent anion channel 3	0.0	
chr9	139427942	139428043	reg1035309.p1	3.385	+	TSC_hg19_v1_chr9_-_139378220 AB593115	-49750	-	BC036221 NM_152571 AK055336	-50022	+	TSC_hg19_v1_chr9_-_139377505 AB002308 NM_014866	-50488	-	AF308602 M73980 NM_017617 TSC_hg19_v1_chr9_-_139440260	12258	-	NM_016215 AL512735 AY358903 BC088371 AY358902	129409	+	TSC_hg19_v1_chr9_+_139560219 NM_201446	132223	+	AB593115|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##BC036221|C9orf163|158055|chromosome 9 open reading frame 163##NM_152571|C9orf163|158055|chromosome 9 open reading frame 163##AK055336|C9orf163|158055|chromosome 9 open reading frame 163##AB002308|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##NM_014866|SEC16A|9919|SEC16 homolog A (S. cerevisiae)##AF308602|NOTCH1|4851|notch 1##M73980|NOTCH1|4851|notch 1##NM_017617|NOTCH1|4851|notch 1##NM_016215|EGFL7|51162|EGF-like-domain, multiple 7##AL512735|EGFL7|51162|EGF-like-domain, multiple 7##AY358903|EGFL7|51162|EGF-like-domain, multiple 7##BC088371|EGFL7|51162|EGF-like-domain, multiple 7##AY358902|EGFL7|51162|EGF-like-domain, multiple 7##NM_201446|EGFL7|51162|EGF-like-domain, multiple 7	0.0	
chrX	6281300	6281442	reg1035045.p2	3.385	+	AK055471 BC034018 NM_181332	-134691	-	AB033086 AF376803 AX773938 NM_020742	-135484	-	TSC_hg19_v1_chrX_-_3631668 NM_005044	-2649653	-	AF167078 AF167079 NM_016379	171787	-	TSC_hg19_v1_chrX_+_7065865 AM072428 DQ851172 FM209047	784580	+	M86934 AK300740 BC012494 TSC_hg19_v1_chrX_-_7066203 AK307088 AK223405 AK300985 AK313155 NM_001135565 NM_001178135 NM_001178136 NM_012080	784821	-	AK055471|NLGN4X|57502|neuroligin 4, X-linked##BC034018|NLGN4X|57502|neuroligin 4, X-linked##NM_181332|NLGN4X|57502|neuroligin 4, X-linked##AB033086|NLGN4X|57502|neuroligin 4, X-linked##AF376803|NLGN4X|57502|neuroligin 4, X-linked##AX773938|NLGN4X|57502|neuroligin 4, X-linked##NM_020742|NLGN4X|57502|neuroligin 4, X-linked##NM_005044|PRKX|5613|protein kinase, X-linked##AF167078|VCX3A|51481|variable charge, X-linked 3A##AF167079|VCX2|51480|variable charge, X-linked 2##NM_016379|VCX3A|51481|variable charge, X-linked 3A##AM072428|STS|412|steroid sulfatase (microsomal), isozyme S##FM209047|STS|412|steroid sulfatase (microsomal), isozyme S##M86934|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300740|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##BC012494|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK307088|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK223405|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK300985|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##AK313155|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001135565|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178135|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_001178136|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1##NM_012080|HDHD1|8226|haloacid dehalogenase-like hydrolase domain containing 1	0.0	
chr10	16933424	16933532	reg1045934.p1	3.384	+	TSC_hg19_v1_chr10_-_16859451 BC015644 BC005993 BC107898 BX647733 NM_012425 NM_152724	-74043	-	TSC_hg19_v1_chr10_-_16859397 AK225681 AK312520	-74084	-	TSC_hg19_v1_chr10_-_16859375 AK292911 BC008691	-74119	-	AF034611 NM_001081 TSC_hg19_v1_chr10_-_17171878	238355	-	TSC_hg19_v1_chr10_-_17243660 CR450316 AF045888 AK291417 AF012128 BC047733 AK303428 BX537961 AJ223333 AK299027	310255	-	NM_004412	310591	-	BC015644|RSU1|6251|Ras suppressor protein 1##BC005993|RSU1|6251|Ras suppressor protein 1##BC107898|RSU1|6251|Ras suppressor protein 1##BX647733|RSU1|6251|Ras suppressor protein 1##NM_012425|RSU1|6251|Ras suppressor protein 1##NM_152724|RSU1|6251|Ras suppressor protein 1##AK225681|RSU1|6251|Ras suppressor protein 1##AK312520|RSU1|6251|Ras suppressor protein 1##AK292911|RSU1|6251|Ras suppressor protein 1##BC008691|RSU1|6251|Ras suppressor protein 1##AF034611|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)##NM_001081|CUBN|8029|cubilin (intrinsic factor-cobalamin receptor)##CR450316|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF045888|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK291417|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AF012128|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##BC047733|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK303428|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##BX537961|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AJ223333|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##AK299027|TRDMT1|1787|tRNA aspartic acid methyltransferase 1##NM_004412|TRDMT1|1787|tRNA aspartic acid methyltransferase 1	0.253194	CTCF.p2:-1:0.253
chr10	93971142	93971243	reg1045210.p1	3.384	+	TSC_hg19_v1_chr10_+_93683569 AF038362 NM_003972 BC112201 AJ001017	-287500	+	TSC_hg19_v1_chr10_+_93683526 AK308399	-287676	+	AK315427 BC025966 AK075410 NM_152429	-301972	-	AB023157 NM_001178137 TSC_hg19_v1_chr10_-_94003035	31827	-	TSC_hg19_v1_chr10_-_94050827 BC036444 AK302576 NM_014912	79644	-	TSC_hg19_v1_chr10_+_94050959 AK000452 AK309175 NM_017824 AK294799 BC015480 AB191202 AB529108	79862	+	AF038362|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##NM_003972|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##BC112201|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AJ001017|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AK308399|BTAF1|9044|BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae)##AK315427|FGFBP3|143282|fibroblast growth factor binding protein 3##BC025966|FGFBP3|143282|fibroblast growth factor binding protein 3##AK075410|FGFBP3|143282|fibroblast growth factor binding protein 3##NM_152429|FGFBP3|143282|fibroblast growth factor binding protein 3##AB023157|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_001178137|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##BC036444|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK302576|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##NM_014912|CPEB3|22849|cytoplasmic polyadenylation element binding protein 3##AK000452|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK309175|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##NM_017824|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AK294799|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##BC015480|MARCH5|54708|membrane-associated ring finger (C3HC4) 5##AB191202|MARCH5|54708|membrane-associated ring finger (C3HC4) 5	0.0	
chr12	107141949	107142037	reg1046829.p1	3.384	+	BC028582 NM_032491 AF332192 AK315698 BC030644 CU688514 CU688962 DQ890831 DQ893986	-63460	+	NM_001206691 AB095365 AK302837 AB044245	-147062	+	AB095366 NM_213594 TSC_hg19_v1_chr12_+_106976698 AK291445	-165302	+	TSC_hg19_v1_chr12_+_107168357 NM_018157 BC132689 BC144056 BC034220 AK001482 AY221116	26469	+	TSC_hg19_v1_chr12_+_107349591 NM_152261	207604	+	AK024021 TSC_hg19_v1_chr12_+_107349684 AK001731 BC020522 AK022770	207715	+	BC028582|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_032491|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AF332192|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK315698|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##BC030644|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ890831|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##DQ893986|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_001206691|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095365|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK302837|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB044245|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AB095366|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_213594|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##AK291445|RFX4|5992|regulatory factor X, 4 (influences HLA class II expression)##NM_018157|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC132689|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC144056|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##BC034220|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AK001482|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##AY221116|RIC8B|55188|resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)##NM_152261|C12orf23|90488|chromosome 12 open reading frame 23##AK024021|C12orf23|90488|chromosome 12 open reading frame 23##AK001731|C12orf23|90488|chromosome 12 open reading frame 23##BC020522|C12orf23|90488|chromosome 12 open reading frame 23##AK022770|C12orf23|90488|chromosome 12 open reading frame 23	0.0	
chr15	57210716	57210875	reg1020640.p2	3.384	+	TSC_hg19_v1_chr15_-_57210733 AK096657 BC036541	-59	-	TSC_hg19_v1_chr15_-_57025818 BX641000 BX640707 NM_001002843 NM_001002844 NM_017661 AK295159	-184963	-	TSC_hg19_v1_chr15_-_57025690 AB046804 BC053649 BC064359 AK310882 AK289739 BC130451 BC136412	-185083	-	TSC_hg19_v1_chr15_+_57210823 NM_003205 NM_207036 NM_207037 NM_207038	32	+	TSC_hg19_v1_chr15_+_57210872 AL831981 AK294617 AK310708 AK312710	73	+	TSC_hg19_v1_chr15_+_57210901 BC050556 BC051769 M80627	107	+	AK096657|LOC145783|145783|uncharacterized LOC145783##BX641000|ZNF280D|54816|zinc finger protein 280D##BX640707|ZNF280D|54816|zinc finger protein 280D##NM_001002843|ZNF280D|54816|zinc finger protein 280D##NM_001002844|ZNF280D|54816|zinc finger protein 280D##NM_017661|ZNF280D|54816|zinc finger protein 280D##AK295159|ZNF280D|54816|zinc finger protein 280D##AB046804|ZNF280D|54816|zinc finger protein 280D##BC053649|ZNF280D|54816|zinc finger protein 280D##BC064359|ZNF280D|54816|zinc finger protein 280D##AK310882|ZNF280D|54816|zinc finger protein 280D##AK289739|ZNF280D|54816|zinc finger protein 280D##BC130451|ZNF280D|54816|zinc finger protein 280D##BC136412|ZNF280D|54816|zinc finger protein 280D##NM_003205|TCF12|6938|transcription factor 12##NM_207036|TCF12|6938|transcription factor 12##NM_207037|TCF12|6938|transcription factor 12##NM_207038|TCF12|6938|transcription factor 12##AL831981|TCF12|6938|transcription factor 12##AK294617|TCF12|6938|transcription factor 12##AK310708|TCF12|6938|transcription factor 12##AK312710|TCF12|6938|transcription factor 12##BC050556|TCF12|6938|transcription factor 12##BC051769|TCF12|6938|transcription factor 12##M80627|TCF12|6938|transcription factor 12	0.116337	
chr19	12893556	12893653	reg1044143.p2	3.384	+	TSC_hg19_v1_chr19_-_12886422 NM_001100176 NM_013312	-7177	-	CU680326 DQ891339 DQ893360 DQ894521 DQ896679 AB527820 TSC_hg19_v1_chr19_-_12886342 AF044924 BC012443	-7277	-	AF440756 AY515705 NM_017682 AK000139 AK225232	-30166	+	TSC_hg19_v1_chr19_+_12902286 DQ650707	8686	+	AK222532 TSC_hg19_v1_chr19_+_12902299 AK313737 BC110372 BC004250 BC009465 BC009466 NM_002229 X51345	8709	+	BC000452 BC003022 BC064138 TSC_hg19_v1_chr19_-_12912615 Z22548 AK289485 AK293957 BC039428 AK022395 NM_005809 NM_181738	19060	-	NM_001100176|HOOK2|29911|hook homolog 2 (Drosophila)##NM_013312|HOOK2|29911|hook homolog 2 (Drosophila)##DQ891339|HOOK2|29911|hook homolog 2 (Drosophila)##DQ893360|HOOK2|29911|hook homolog 2 (Drosophila)##DQ894521|HOOK2|29911|hook homolog 2 (Drosophila)##DQ896679|HOOK2|29911|hook homolog 2 (Drosophila)##AF044924|HOOK2|29911|hook homolog 2 (Drosophila)##BC012443|HOOK2|29911|hook homolog 2 (Drosophila)##AF440756|BEST2|54831|bestrophin 2##AY515705|BEST2|54831|bestrophin 2##NM_017682|BEST2|54831|bestrophin 2##AK000139|BEST2|54831|bestrophin 2##AK225232|BEST2|54831|bestrophin 2##AK222532|JUNB|3726|jun B proto-oncogene##AK313737|JUNB|3726|jun B proto-oncogene##BC004250|JUNB|3726|jun B proto-oncogene##BC009465|JUNB|3726|jun B proto-oncogene##BC009466|JUNB|3726|jun B proto-oncogene##NM_002229|JUNB|3726|jun B proto-oncogene##X51345|JUNB|3726|jun B proto-oncogene##BC000452|PRDX2|7001|peroxiredoxin 2##BC003022|PRDX2|7001|peroxiredoxin 2##BC064138|PRDX2|7001|peroxiredoxin 2##Z22548|PRDX2|7001|peroxiredoxin 2##AK289485|PRDX2|7001|peroxiredoxin 2##AK293957|PRDX2|7001|peroxiredoxin 2##BC039428|PRDX2|7001|peroxiredoxin 2##AK022395|PRDX2|7001|peroxiredoxin 2##NM_005809|PRDX2|7001|peroxiredoxin 2##NM_181738|PRDX2|7001|peroxiredoxin 2	0.0	
chr20	37650030	37650102	reg1038676.p1	3.384	+	TSC_hg19_v1_chr20_+_37590995 NM_001190809 NM_021931 AK303396 BC132669 BC143941 BC059369 AK307863 BC033453 AK296506 AK026412 HQ258480 AK296793	-59077	+	TSC_hg19_v1_chr20_+_37555059 AK303860 BC001068 BC006553 BC080188 BC063661 BC053683	-94998	+	AK055793 NM_030919 TSC_hg19_v1_chr20_+_37555024	-95077	+	BC036689 NM_005461 TSC_hg19_v1_chr20_-_39317877	1667811	-	AK310516 NM_003286 AK225095 AK292943 BC039009 BC004475 TSC_hg19_v1_chr20_+_39657500 AK310508 BC067349 J03250	2007428	+	BC136297 TSC_hg19_v1_chr20_+_39657671 U07804 U07806	2007598	+	NM_001190809|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##NM_021931|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303396|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC132669|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC143941|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC059369|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK307863|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##BC033453|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296506|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK026412|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##HQ258480|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK296793|DHX35|60625|DEAH (Asp-Glu-Ala-His) box polypeptide 35##AK303860|FAM83D|81610|family with sequence similarity 83, member D##BC001068|FAM83D|81610|family with sequence similarity 83, member D##BC006553|FAM83D|81610|family with sequence similarity 83, member D##BC080188|FAM83D|81610|family with sequence similarity 83, member D##BC063661|FAM83D|81610|family with sequence similarity 83, member D##BC053683|FAM83D|81610|family with sequence similarity 83, member D##AK055793|FAM83D|81610|family with sequence similarity 83, member D##NM_030919|FAM83D|81610|family with sequence similarity 83, member D##BC036689|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_005461|MAFB|9935|v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)##NM_003286|TOP1|7150|topoisomerase (DNA) I##AK225095|TOP1|7150|topoisomerase (DNA) I##AK292943|TOP1|7150|topoisomerase (DNA) I##BC039009|TOP1|7150|topoisomerase (DNA) I##BC004475|TOP1|7150|topoisomerase (DNA) I##AK310508|TOP1|7150|topoisomerase (DNA) I##BC067349|TOP1|7150|topoisomerase (DNA) I##J03250|TOP1|7150|topoisomerase (DNA) I##BC136297|TOP1|7150|topoisomerase (DNA) I##U07804|TOP1|7150|topoisomerase (DNA) I##U07806|TOP1|7150|topoisomerase (DNA) I	0.651206	CTCF.p2:-40:0.651
chr2	209962420	209962487	reg1043824.p2	3.384	+	BC036811 NM_005048 U25128 HQ257935 AY497546	-690792	+	AK294181 TSC_hg19_v1_chr2_+_209224677	-737828	+	TSC_hg19_v1_chr2_+_209131083 AK127769	-831370	+	TSC_hg19_v1_chr2_+_210288770 NM_001039538 BC038857 BC066648	326301	+	BC110423 TSC_hg19_v1_chr2_+_210444185	481717	+	TSC_hg19_v1_chr2_+_210444369 NM_002374 NM_031845 NM_031847 U01828 AK307603	481941	+	BC036811|PTH2R|5746|parathyroid hormone 2 receptor##NM_005048|PTH2R|5746|parathyroid hormone 2 receptor##U25128|PTH2R|5746|parathyroid hormone 2 receptor##HQ257935|PTH2R|5746|parathyroid hormone 2 receptor##AY497546|PTH2R|5746|parathyroid hormone 2 receptor##AK294181|PTH2R|5746|parathyroid hormone 2 receptor##AK127769|PIKFYVE|200576|phosphoinositide kinase, FYVE finger containing##NM_001039538|MAP2|4133|microtubule-associated protein 2##BC038857|MAP2|4133|microtubule-associated protein 2##BC066648|MAP2|4133|microtubule-associated protein 2##BC110423|MAP2|4133|microtubule-associated protein 2##NM_002374|MAP2|4133|microtubule-associated protein 2##NM_031845|MAP2|4133|microtubule-associated protein 2##NM_031847|MAP2|4133|microtubule-associated protein 2##U01828|MAP2|4133|microtubule-associated protein 2##AK307603|MAP2|4133|microtubule-associated protein 2	0.0	
chr22	26714959	26715128	reg1011023.p1	3.384	+	CR456574 CU013173 CU013461 AB041736 TSC_hg19_v1_chr22_+_26565704	-149380	+	TSC_hg19_v1_chr22_+_26565455 AB023144 BC126115 BC143851 BC143854	-149546	+	TSC_hg19_v1_chr22_+_26565427 AY358405 NM_001184773 NM_001184774 NM_001184775 NM_001184776 NM_001184777 NM_021115	-149606	+	TSC_hg19_v1_chr22_+_26825246 NM_020437 BC036753 AK315112	110281	+	AK097886 BC035614 AK054717 AL365512 NM_152841	160420	-	TSC_hg19_v1_chr22_-_26879750 AK057648 AK290211	164699	-	CR456574|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013173|SEZ6L|23544|seizure related 6 homolog (mouse)-like##CU013461|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB041736|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AB023144|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC126115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143851|SEZ6L|23544|seizure related 6 homolog (mouse)-like##BC143854|SEZ6L|23544|seizure related 6 homolog (mouse)-like##AY358405|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184773|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184774|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184775|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184776|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_001184777|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_021115|SEZ6L|23544|seizure related 6 homolog (mouse)-like##NM_020437|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##BC036753|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK315112|ASPHD2|57168|aspartate beta-hydroxylase domain containing 2##AK097886|HPS4|89781|Hermansky-Pudlak syndrome 4##BC035614|HPS4|89781|Hermansky-Pudlak syndrome 4##AK054717|HPS4|89781|Hermansky-Pudlak syndrome 4##AL365512|HPS4|89781|Hermansky-Pudlak syndrome 4##NM_152841|HPS4|89781|Hermansky-Pudlak syndrome 4##AK057648|HPS4|89781|Hermansky-Pudlak syndrome 4##AK290211|HPS4|89781|Hermansky-Pudlak syndrome 4	0.0	
chr22	43045533	43045600	reg1030687.p1	3.384	+	TSC_hg19_v1_chr22_-_43045399 NM_000398	-163	-	TSC_hg19_v1_chr22_-_43045347 AJ010116 AJ010117 AJ010118 BT009821 AB463000 CU012995 CU013283 CR456435 AF361370 Y09501 BC004821	-234	-	TSC_hg19_v1_chr22_-_43042979 NM_001129819 NM_001171661 NM_007326	-2581	-	AK074388 TSC_hg19_v1_chr22_-_43089917 AJ245581 CU677819 AB590407 DQ891619 DQ894811	44341	-	TSC_hg19_v1_chr22_-_43116877 BC017068 GU902275 GU902276 GU902277 GU902278 GU902279 GU902280 GU902281 AK130208 NM_017436	71289	-	TSC_hg19_v1_chr22_-_43117270 AK312927	71711	-	NM_000398|CYB5R3|1727|cytochrome b5 reductase 3##AJ010116|CYB5R3|1727|cytochrome b5 reductase 3##AJ010117|CYB5R3|1727|cytochrome b5 reductase 3##AJ010118|CYB5R3|1727|cytochrome b5 reductase 3##BT009821|CYB5R3|1727|cytochrome b5 reductase 3##CU012995|CYB5R3|1727|cytochrome b5 reductase 3##CU013283|CYB5R3|1727|cytochrome b5 reductase 3##CR456435|CYB5R3|1727|cytochrome b5 reductase 3##AF361370|CYB5R3|1727|cytochrome b5 reductase 3##Y09501|CYB5R3|1727|cytochrome b5 reductase 3##BC004821|CYB5R3|1727|cytochrome b5 reductase 3##NM_001129819|CYB5R3|1727|cytochrome b5 reductase 3##NM_001171661|CYB5R3|1727|cytochrome b5 reductase 3##NM_007326|CYB5R3|1727|cytochrome b5 reductase 3##AK074388|A4GALT|53947|alpha 1,4-galactosyltransferase##AJ245581|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ891619|A4GALT|53947|alpha 1,4-galactosyltransferase##DQ894811|A4GALT|53947|alpha 1,4-galactosyltransferase##BC017068|A4GALT|53947|alpha 1,4-galactosyltransferase##NM_017436|A4GALT|53947|alpha 1,4-galactosyltransferase##AK312927|A4GALT|53947|alpha 1,4-galactosyltransferase	0.012014	
chr3	184466288	184466469	reg1030867.p1	3.384	+	AB590456 CU679591 AF320910 TSC_hg19_v1_chr3_-_184429853 AF295378 BC010056 NM_022149	-36615	-	TSC_hg19_v1_chr3_+_184279572 NM_004443 BC052968	-186796	+	AF209928 AF209929 AF209930 AF283325 NM_003741 AY358926 BC112345 AB208947 AK074147 AK293456 AK295632	-368338	+	TSC_hg19_v1_chr3_+_184529961 NM_001009921 NM_015303 AK056661 AK292423 BX647915	63545	+	TSC_hg19_v1_chr3_+_184529983 BC140768	63617	+	TSC_hg19_v1_chr3_-_184870632 BC137178 BC137179 BC150565	404275	-	AF320910|MAGEF1|64110|melanoma antigen family F, 1##AF295378|MAGEF1|64110|melanoma antigen family F, 1##BC010056|MAGEF1|64110|melanoma antigen family F, 1##NM_022149|MAGEF1|64110|melanoma antigen family F, 1##NM_004443|EPHB3|2049|EPH receptor B3##BC052968|EPHB3|2049|EPH receptor B3##AF209928|CHRD|8646|chordin##AF209929|CHRD|8646|chordin##AF209930|CHRD|8646|chordin##AF283325|CHRD|8646|chordin##NM_003741|CHRD|8646|chordin##AY358926|CHRD|8646|chordin##BC112345|CHRD|8646|chordin##AB208947|CHRD|8646|chordin##AK074147|CHRD|8646|chordin##AK293456|CHRD|8646|chordin##AK295632|CHRD|8646|chordin##NM_001009921|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##NM_015303|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK056661|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##AK292423|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BX647915|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BC140768|VPS8|23355|vacuolar protein sorting 8 homolog (S. cerevisiae)##BC137178|C3orf70|285382|chromosome 3 open reading frame 70##BC137179|C3orf70|285382|chromosome 3 open reading frame 70##BC150565|C3orf70|285382|chromosome 3 open reading frame 70	0.0	
chr4	156874615	156874796	reg1013252.p2	3.384	+	NM_005651 U32989 TSC_hg19_v1_chr4_+_156824847 AK289418 AK307741 BC005355 EU831460 EU831547 CU675137	-49828	+	AB528059 AJ252011 NM_017419	-87305	-	TSC_hg19_v1_chr4_+_156680603 AK299916	-194099	+	TSC_hg19_v1_chr4_-_156875035 CU690602 BC049206 AK312354 X77383 NM_001334 AK308323	343	-	AB590688 BC051876 BC094746 AF260738 AK300480 AF244813 AK313817 BC041783 BC065490 TSC_hg19_v1_chr4_-_157892334 AM922296 AB033831	1017512	-	BC136662 BC144348 TSC_hg19_v1_chr4_-_157892489	1017773	-	NM_005651|TDO2|6999|tryptophan 2,3-dioxygenase##U32989|TDO2|6999|tryptophan 2,3-dioxygenase##AK289418|TDO2|6999|tryptophan 2,3-dioxygenase##AK307741|TDO2|6999|tryptophan 2,3-dioxygenase##BC005355|TDO2|6999|tryptophan 2,3-dioxygenase##EU831460|TDO2|6999|tryptophan 2,3-dioxygenase##EU831547|TDO2|6999|tryptophan 2,3-dioxygenase##AJ252011|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##NM_017419|ACCN5|51802|amiloride-sensitive cation channel 5, intestinal##AK299916|GUCY1B3|2983|guanylate cyclase 1, soluble, beta 3##BC049206|CTSO|1519|cathepsin O##AK312354|CTSO|1519|cathepsin O##X77383|CTSO|1519|cathepsin O##NM_001334|CTSO|1519|cathepsin O##AK308323|CTSO|1519|cathepsin O##BC051876|PDGFC|56034|platelet derived growth factor C##BC094746|PDGFC|56034|platelet derived growth factor C##AF260738|PDGFC|56034|platelet derived growth factor C##AK300480|PDGFC|56034|platelet derived growth factor C##AF244813|PDGFC|56034|platelet derived growth factor C##AK313817|PDGFC|56034|platelet derived growth factor C##BC041783|PDGFC|56034|platelet derived growth factor C##AM922296|PDGFC|56034|platelet derived growth factor C##AB033831|PDGFC|56034|platelet derived growth factor C##BC136662|PDGFC|56034|platelet derived growth factor C##BC144348|PDGFC|56034|platelet derived growth factor C	0.0	
chr5	90607596	90607717	reg1036031.p2	3.384	+	TSC_hg19_v1_chr5_+_89854616 AF435925 NM_032119	-753042	+	BC136740 BC136741 TSC_hg19_v1_chr5_-_89825381 BX537972 CR933624 AL832721 AK291478 BC058027 NM_198273	-782290	-	NM_006467 AK295434 U93868	-836954	+	AK091866 TSC_hg19_v1_chr5_-_90610220	2589	-	TSC_hg19_v1_chr5_+_90676181 BC043415	68506	+	BC015928 AB037797 BC053619 AK291753 TSC_hg19_v1_chr5_-_90679135 NM_020801	71476	-	AF435925|GPR98|84059|G protein-coupled receptor 98##NM_032119|GPR98|84059|G protein-coupled receptor 98##BC136740|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC136741|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BX537972|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##CR933624|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AL832721|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##AK291478|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##BC058027|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_198273|LYSMD3|116068|LysM, putative peptidoglycan-binding, domain containing 3##NM_006467|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK295434|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##U93868|POLR3G|10622|polymerase (RNA) III (DNA directed) polypeptide G (32kD)##AK091866|LOC100505994|100505994|uncharacterized LOC100505994##BC043415|LOC100129716|100129716|uncharacterized LOC100129716##BC015928|ARRDC3|57561|arrestin domain containing 3##AB037797|ARRDC3|57561|arrestin domain containing 3##BC053619|ARRDC3|57561|arrestin domain containing 3##AK291753|ARRDC3|57561|arrestin domain containing 3##NM_020801|ARRDC3|57561|arrestin domain containing 3	0.484223	CTCF.p2:81:0.484
chr8	11509239	11509320	reg1038524.p1	3.384	+	S76617 NM_001715 BC018703 BC004473 BC038555	-157686	+	AJ301564 TSC_hg19_v1_chr8_-_11324263 AL834122 BC029587 NM_053279	-185050	-	BC038546 TSC_hg19_v1_chr8_-_11205010	-304275	-	TSC_hg19_v1_chr8_+_11561713 NM_002052 BC033672	52441	+	TSC_hg19_v1_chr8_+_11627280 NM_001135746 NM_001135747 NM_001135748 NM_145043 AK097389 AK294224 AK225837 AK056206 BX537529 BC013952 BC013964	117989	+	TSC_hg19_v1_chr8_+_11660183 NM_004462	150905	+	S76617|BLK|640|B lymphoid tyrosine kinase##NM_001715|BLK|640|B lymphoid tyrosine kinase##BC018703|BLK|640|B lymphoid tyrosine kinase##BC004473|BLK|640|B lymphoid tyrosine kinase##BC038555|BLK|640|B lymphoid tyrosine kinase##AJ301564|FAM167A|83648|family with sequence similarity 167, member A##AL834122|FAM167A|83648|family with sequence similarity 167, member A##BC029587|FAM167A|83648|family with sequence similarity 167, member A##NM_053279|FAM167A|83648|family with sequence similarity 167, member A##BC038546|LOC100129129|100129129|uncharacterized LOC100129129##NM_002052|GATA4|2626|GATA binding protein 4##BC033672|GATA4|2626|GATA binding protein 4##NM_001135746|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135747|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_001135748|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_145043|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK097389|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK294224|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK225837|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##AK056206|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BX537529|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013952|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##BC013964|NEIL2|252969|nei endonuclease VIII-like 2 (E. coli)##NM_004462|FDFT1|2222|farnesyl-diphosphate farnesyltransferase 1	0.89183	CTCF.p2:5:0.892
chr11	128392130	128392227	reg1036294.p1	3.383	+	TSC_hg19_v1_chr11_-_128392200 BC017314 X14798 AK291840 AK301405 NM_001162422 NM_005238	-44	-	AY943926 BT019452 BT019453 CR542254 J04101 TSC_hg19_v1_chr11_-_128392038	-215	-	BC113593 BC113597 TSC_hg19_v1_chr11_+_126873309	-1518873	+	BX640634 NM_001143820	65274	-	TSC_hg19_v1_chr11_+_128563793 NM_001167681 NM_002017	171620	+	TSC_hg19_v1_chr11_+_128563966 AK313370	171783	+	BC017314|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##X14798|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK291840|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AK301405|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001162422|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_005238|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##AY943926|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019452|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BT019453|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##CR542254|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##J04101|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##BC113593|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BC113597|KIRREL3-AS3|283165|KIRREL3 antisense RNA 3 (non-protein coding)##BX640634|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001143820|ETS1|2113|v-ets erythroblastosis virus E26 oncogene homolog 1 (avian)##NM_001167681|FLI1|2313|Friend leukemia virus integration 1##NM_002017|FLI1|2313|Friend leukemia virus integration 1##AK313370|FLI1|2313|Friend leukemia virus integration 1	0.0	
chr1	193028791	193028858	reg1031658.p2	3.383	+	TSC_hg19_v1_chr1_+_193028764 AK314594 S57803	-128	+	CR936683 TSC_hg19_v1_chr1_+_193028589	-236	+	TSC_hg19_v1_chr1_+_193028537 NM_001173524	-281	+	NM_001042369 NM_001042370 NM_001173525 NM_004600	179	+	BC036658 AY205314 AY205315 M25077 TSC_hg19_v1_chr1_+_193029273	400	+	AF151891 BC028113 TSC_hg19_v1_chr1_-_193074545 AF132495 BC009669 AY038988 NM_197962	45726	-	AK314594|TROVE2|6738|TROVE domain family, member 2##S57803|TROVE2|6738|TROVE domain family, member 2##CR936683|TROVE2|6738|TROVE domain family, member 2##NM_001173524|TROVE2|6738|TROVE domain family, member 2##NM_001042369|TROVE2|6738|TROVE domain family, member 2##NM_001042370|TROVE2|6738|TROVE domain family, member 2##NM_001173525|TROVE2|6738|TROVE domain family, member 2##NM_004600|TROVE2|6738|TROVE domain family, member 2##BC036658|TROVE2|6738|TROVE domain family, member 2##AY205314|TROVE2|6738|TROVE domain family, member 2##AY205315|TROVE2|6738|TROVE domain family, member 2##M25077|TROVE2|6738|TROVE domain family, member 2##AF151891|GLRX2|51022|glutaredoxin 2##BC028113|GLRX2|51022|glutaredoxin 2##AF132495|GLRX2|51022|glutaredoxin 2##BC009669|GLRX2|51022|glutaredoxin 2##AY038988|GLRX2|51022|glutaredoxin 2##NM_197962|GLRX2|51022|glutaredoxin 2	0.0	
chr13	111293983	111294066	reg1043610.p2	3.383	+	TSC_hg19_v1_chr13_-_111268694 AK095260	-25326	-	TSC_hg19_v1_chr13_+_111267898 AK093771 AK298917 AX748297 AK302117 AK057767 AK296758 NM_001242881 NM_018210 AK296227 AK024260 BC041028 AK001631 AK225129	-25982	+	TSC_hg19_v1_chr13_+_111267870 NM_001242882 NM_001242883	-26194	+	TSC_hg19_v1_chr13_-_111358444 AB062436	64414	-	TSC_hg19_v1_chr13_-_111358447 BC007220	64424	-	TSC_hg19_v1_chr13_-_111358460 AK022180 NM_024537	64443	-	AK093771|CARKD|55739|carbohydrate kinase domain containing##AK298917|CARKD|55739|carbohydrate kinase domain containing##AK302117|CARKD|55739|carbohydrate kinase domain containing##AK057767|CARKD|55739|carbohydrate kinase domain containing##AK296758|CARKD|55739|carbohydrate kinase domain containing##NM_001242881|CARKD|55739|carbohydrate kinase domain containing##NM_018210|CARKD|55739|carbohydrate kinase domain containing##AK296227|CARKD|55739|carbohydrate kinase domain containing##AK024260|CARKD|55739|carbohydrate kinase domain containing##BC041028|CARKD|55739|carbohydrate kinase domain containing##AK001631|CARKD|55739|carbohydrate kinase domain containing##AK225129|CARKD|55739|carbohydrate kinase domain containing##NM_001242882|CARKD|55739|carbohydrate kinase domain containing##NM_001242883|CARKD|55739|carbohydrate kinase domain containing##AB062436|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##BC007220|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##AK022180|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)##NM_024537|CARS2|79587|cysteinyl-tRNA synthetase 2, mitochondrial (putative)	0.0	
chr14	59351312	59351415	reg1037693.p1	3.383	+	TSC_hg19_v1_chr14_+_59104741 NM_001079520 NM_016651	-246617	+	AK302579 NM_001244193 AK310356 AK302718	-444937	+	NM_014749 BC066647	-456632	+	TSC_hg19_v1_chr14_+_59655450 BX648383 BC064999 NM_014992 BC038428 AK291790 AK021890 BX247986	304041	+	TSC_hg19_v1_chr14_-_59931852 DQ893361 DQ896680 AY288418 M76676	580559	-	TSC_hg19_v1_chr14_-_59932051 BC032831 NM_022571	580693	-	NM_001079520|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##NM_016651|DACT1|51339|dapper, antagonist of beta-catenin, homolog 1 (Xenopus laevis)##AK302579|KIAA0586|9786|KIAA0586##NM_001244193|KIAA0586|9786|KIAA0586##AK310356|KIAA0586|9786|KIAA0586##AK302718|KIAA0586|9786|KIAA0586##NM_014749|KIAA0586|9786|KIAA0586##BC066647|KIAA0586|9786|KIAA0586##BC064999|DAAM1|23002|dishevelled associated activator of morphogenesis 1##NM_014992|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BC038428|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK291790|DAAM1|23002|dishevelled associated activator of morphogenesis 1##AK021890|DAAM1|23002|dishevelled associated activator of morphogenesis 1##BX247986|DAAM1|23002|dishevelled associated activator of morphogenesis 1##DQ893361|GPR135|64582|G protein-coupled receptor 135##DQ896680|GPR135|64582|G protein-coupled receptor 135##AY288418|GPR135|64582|G protein-coupled receptor 135##M76676|GPR135|64582|G protein-coupled receptor 135##BC032831|GPR135|64582|G protein-coupled receptor 135##NM_022571|GPR135|64582|G protein-coupled receptor 135	0.0	
chr14	94121696	94121805	reg1014297.p2	3.383	+	AY161004 NM_182971 BC101125 BC101126	-308202	+	AK125327 NM_020818	-322186	+	TSC_hg19_v1_chr14_-_93799376 AK291422 BC141850 BX248762 NM_001002860 NM_018167 BC047071	-322346	-	AY225516 AY225517 NM_178013	133015	-	NM_001207071 NM_138344 AK093387 AX748092	263498	+	NM_001207074 AK315393 NM_001207073 BC009073 NM_001207072	271958	+	AY161004|COX8C|341947|cytochrome c oxidase subunit VIIIC##NM_182971|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101125|COX8C|341947|cytochrome c oxidase subunit VIIIC##BC101126|COX8C|341947|cytochrome c oxidase subunit VIIIC##AK125327|UNC79|57578|unc-79 homolog (C. elegans)##NM_020818|UNC79|57578|unc-79 homolog (C. elegans)##AK291422|BTBD7|55727|BTB (POZ) domain containing 7##BC141850|BTBD7|55727|BTB (POZ) domain containing 7##BX248762|BTBD7|55727|BTB (POZ) domain containing 7##NM_001002860|BTBD7|55727|BTB (POZ) domain containing 7##NM_018167|BTBD7|55727|BTB (POZ) domain containing 7##BC047071|BTBD7|55727|BTB (POZ) domain containing 7##AY225516|PRIMA1|145270|proline rich membrane anchor 1##AY225517|PRIMA1|145270|proline rich membrane anchor 1##NM_178013|PRIMA1|145270|proline rich membrane anchor 1##NM_001207071|FAM181A|90050|family with sequence similarity 181, member A##NM_138344|FAM181A|90050|family with sequence similarity 181, member A##AK093387|FAM181A|90050|family with sequence similarity 181, member A##NM_001207074|FAM181A|90050|family with sequence similarity 181, member A##AK315393|FAM181A|90050|family with sequence similarity 181, member A##NM_001207073|FAM181A|90050|family with sequence similarity 181, member A##BC009073|FAM181A|90050|family with sequence similarity 181, member A##NM_001207072|FAM181A|90050|family with sequence similarity 181, member A	0.0	
chr15	35212385	35212490	reg1006521.p1	3.383	+	AK129892 AK056592 AK129902 AK290616 TSC_hg19_v1_chr15_-_35087751 BC009978 NM_005159	-124600	-	BC069131 BC069339 NM_020660 BC112110 BC112114 BC143788	-165703	-	BX647673 TSC_hg19_v1_chr15_-_34875067	-337368	-	AB384497 AK291615 BC127111 BC127112 TSC_hg19_v1_chr15_-_35261899 AB011132 AK315815 BX647820 EF553519 NM_014691	49490	-	TSC_hg19_v1_chr15_-_35280489 BC071603 AK291438	68017	-	NM_014106 TSC_hg19_v1_chr15_-_35280498	68075	-	AK129892|ACTC1|70|actin, alpha, cardiac muscle 1##AK056592|ACTC1|70|actin, alpha, cardiac muscle 1##AK129902|ACTC1|70|actin, alpha, cardiac muscle 1##AK290616|ACTC1|70|actin, alpha, cardiac muscle 1##BC009978|ACTC1|70|actin, alpha, cardiac muscle 1##NM_005159|ACTC1|70|actin, alpha, cardiac muscle 1##BC069131|GJD2|57369|gap junction protein, delta 2, 36kDa##BC069339|GJD2|57369|gap junction protein, delta 2, 36kDa##NM_020660|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112110|GJD2|57369|gap junction protein, delta 2, 36kDa##BC112114|GJD2|57369|gap junction protein, delta 2, 36kDa##BC143788|GJD2|57369|gap junction protein, delta 2, 36kDa##BX647673|GOLGA8B|440270|golgin A8 family, member B##AK291615|AQR|9716|aquarius homolog (mouse)##BC127111|AQR|9716|aquarius homolog (mouse)##BC127112|AQR|9716|aquarius homolog (mouse)##AB011132|AQR|9716|aquarius homolog (mouse)##AK315815|AQR|9716|aquarius homolog (mouse)##BX647820|AQR|9716|aquarius homolog (mouse)##EF553519|AQR|9716|aquarius homolog (mouse)##NM_014691|AQR|9716|aquarius homolog (mouse)##BC071603|ZNF770|54989|zinc finger protein 770##AK291438|ZNF770|54989|zinc finger protein 770##NM_014106|ZNF770|54989|zinc finger protein 770	0.0	
chr16	88343645	88343758	reg1041668.p1	3.383	+	AK094158 NM_001173543	-340078	+	AK315535 NM_001173542	-350225	+	TSC_hg19_v1_chr16_+_87985039 AK001039 NM_001173539 NM_001173540 NM_001173541 NM_017869 NM_079837 AK125232 AK315089 AK293472 AK297945 BC009424	-358533	+	NM_001127464	150177	+	TSC_hg19_v1_chr16_+_88519687 AF488691	176004	+	TSC_hg19_v1_chr16_+_88519921 NM_153813	176264	+	AK094158|BANP|54971|BTG3 associated nuclear protein##NM_001173543|BANP|54971|BTG3 associated nuclear protein##AK315535|BANP|54971|BTG3 associated nuclear protein##NM_001173542|BANP|54971|BTG3 associated nuclear protein##AK001039|BANP|54971|BTG3 associated nuclear protein##NM_001173539|BANP|54971|BTG3 associated nuclear protein##NM_001173540|BANP|54971|BTG3 associated nuclear protein##NM_001173541|BANP|54971|BTG3 associated nuclear protein##NM_017869|BANP|54971|BTG3 associated nuclear protein##NM_079837|BANP|54971|BTG3 associated nuclear protein##AK125232|BANP|54971|BTG3 associated nuclear protein##AK315089|BANP|54971|BTG3 associated nuclear protein##AK293472|BANP|54971|BTG3 associated nuclear protein##AK297945|BANP|54971|BTG3 associated nuclear protein##BC009424|BANP|54971|BTG3 associated nuclear protein##NM_001127464|ZNF469|84627|zinc finger protein 469##AF488691|ZFPM1|161882|zinc finger protein, multitype 1##NM_153813|ZFPM1|161882|zinc finger protein, multitype 1	0.876987	CTCF.p2:1:0.877
chr19	5689350	5689457	reg1025279.p1	3.383	+	CU690982 TSC_hg19_v1_chr19_+_5687370	-2075	+	TSC_hg19_v1_chr19_+_5681182 BC053546 BC072434 BC018336	-8235	+	TSC_hg19_v1_chr19_+_5681023 BC094798 AY268351 AY313895 AY313896 NM_198704 NM_198705 AK308206 AY313894 NM_198533 AY268353 NM_198707 BC062777 AY268352 AY268354 NM_198706 NM_198708	-8358	+	TSC_hg19_v1_chr19_+_5690306 NM_033643 BC091508 AL050273 AY590779 AK311990	885	+	TSC_hg19_v1_chr19_+_5690307 BC004971	914	+	TSC_hg19_v1_chr19_+_5690333 NM_015414 BC003052 AF077043 AM393173 AM393746 DQ892096 DQ895289 CR533465	1022	+	BC053546|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##BC072434|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##BC018336|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##BC094798|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY268351|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY313895|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY313896|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_198704|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_198705|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AK308206|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY313894|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_198533|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY268353|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_198707|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##BC062777|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY268352|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##AY268354|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_198706|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_198708|HSD11B1L|374875|hydroxysteroid (11-beta) dehydrogenase 1-like##NM_033643|RPL36|25873|ribosomal protein L36##BC091508|RPL36|25873|ribosomal protein L36##AL050273|RPL36|25873|ribosomal protein L36##AK311990|RPL36|25873|ribosomal protein L36##BC004971|RPL36|25873|ribosomal protein L36##NM_015414|RPL36|25873|ribosomal protein L36##BC003052|RPL36|25873|ribosomal protein L36##AF077043|RPL36|25873|ribosomal protein L36##AM393173|RPL36|25873|ribosomal protein L36##AM393746|RPL36|25873|ribosomal protein L36##DQ892096|RPL36|25873|ribosomal protein L36##DQ895289|RPL36|25873|ribosomal protein L36##CR533465|RPL36|25873|ribosomal protein L36	0.0	
chr20	56058519	56058658	reg1033260.p2	3.383	+	TSC_hg19_v1_chr20_+_55966453 NM_017495 NM_183425 AF432218	-92131	+	NM_001190472	-123711	-	AK292247 AY349350 NM_001015885	-131987	+	BC130486 AF336042 DQ778111 DQ778124 DQ778125 DQ778126 DQ778127 DQ778128 DQ778129 NM_080618 BC060763 AK313990 AK128070	41613	-	NM_002591 AK290802 TSC_hg19_v1_chr20_+_56136165 AK300072 BC023978 BX648510 L05144	77569	+	BC131706 AK314062 AK290918 BC028218 AJ300575 AX775973 AX775975 AK122761 NM_001160417 NM_001160418 NM_001160419 NM_030776	136950	-	NM_017495|RBM38|55544|RNA binding motif protein 38##NM_183425|RBM38|55544|RNA binding motif protein 38##AF432218|RBM38|55544|RNA binding motif protein 38##NM_001190472|MTRNR2L3|100462983|MT-RNR2-like 3##AK292247|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##AY349350|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##NM_001015885|RAE1|8480|RAE1 RNA export 1 homolog (S. pombe)##BC130486|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AF336042|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778111|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778124|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778125|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778126|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778127|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778128|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##DQ778129|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_080618|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##BC060763|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK313990|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##AK128070|CTCFL|140690|CCCTC-binding factor (zinc finger protein)-like##NM_002591|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK290802|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##AK300072|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC023978|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BX648510|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##L05144|PCK1|5105|phosphoenolpyruvate carboxykinase 1 (soluble)##BC131706|ZBP1|81030|Z-DNA binding protein 1##AK314062|ZBP1|81030|Z-DNA binding protein 1##AK290918|ZBP1|81030|Z-DNA binding protein 1##BC028218|ZBP1|81030|Z-DNA binding protein 1##AJ300575|ZBP1|81030|Z-DNA binding protein 1##AX775973|ZBP1|81030|Z-DNA binding protein 1##AX775975|ZBP1|81030|Z-DNA binding protein 1##AK122761|ZBP1|81030|Z-DNA binding protein 1##NM_001160417|ZBP1|81030|Z-DNA binding protein 1##NM_001160418|ZBP1|81030|Z-DNA binding protein 1##NM_001160419|ZBP1|81030|Z-DNA binding protein 1##NM_030776|ZBP1|81030|Z-DNA binding protein 1	0.0	
chr2	191179538	191179653	reg1032528.p1	3.383	+	NM_001042519 BC005083 NM_032321 AK313395	-133955	+	NM_001042520	-164624	+	NM_001042521	-177110	+	TSC_hg19_v1_chr2_-_191184553 AK222979 AK223023 AK308042 BC067822 AK313651 U66669 BC005190	4944	-	NM_014362 NM_198047	5175	-	NM_001128928 NM_002194 TSC_hg19_v1_chr2_+_191208270	28641	+	NM_001042519|C2orf88|84281|chromosome 2 open reading frame 88##BC005083|C2orf88|84281|chromosome 2 open reading frame 88##NM_032321|C2orf88|84281|chromosome 2 open reading frame 88##AK313395|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042520|C2orf88|84281|chromosome 2 open reading frame 88##NM_001042521|C2orf88|84281|chromosome 2 open reading frame 88##AK222979|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK223023|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK308042|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##BC067822|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##AK313651|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##U66669|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##BC005190|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_014362|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_198047|HIBCH|26275|3-hydroxyisobutyryl-CoA hydrolase##NM_001128928|INPP1|3628|inositol polyphosphate-1-phosphatase##NM_002194|INPP1|3628|inositol polyphosphate-1-phosphatase	0.991303	CTCF.p2:49:0.991
chr3	194929117	194929204	reg1041243.p2	3.383	+	BC039689 AK074503 CU691744 TSC_hg19_v1_chr3_+_194407588	-521657	+	TSC_hg19_v1_chr3_+_194406619 NM_153690	-522537	+	NM_018385	-535955	-	TSC_hg19_v1_chr3_-_194991889 BC019036 AK075551 BC039067 NM_152531	62690	-	AB385269 D26069 AJ238248 TSC_hg19_v1_chr3_-_195163773 AK290369 BC060767 AK222635 NM_012287	234542	-	TSC_hg19_v1_chr3_-_195270150 BC007655 BC066921 NM_006241	340953	-	BC039689|FAM43A|131583|family with sequence similarity 43, member A##AK074503|FAM43A|131583|family with sequence similarity 43, member A##NM_153690|FAM43A|131583|family with sequence similarity 43, member A##NM_018385|LSG1|55341|large subunit GTPase 1 homolog (S. cerevisiae)##BC019036|XXYLT1|152002|xyloside xylosyltransferase 1##AK075551|XXYLT1|152002|xyloside xylosyltransferase 1##BC039067|XXYLT1|152002|xyloside xylosyltransferase 1##NM_152531|XXYLT1|152002|xyloside xylosyltransferase 1##D26069|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AJ238248|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK290369|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC060767|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##AK222635|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##NM_012287|ACAP2|23527|ArfGAP with coiled-coil, ankyrin repeat and PH domains 2##BC007655|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##BC066921|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2##NM_006241|PPP1R2|5504|protein phosphatase 1, regulatory (inhibitor) subunit 2	0.0	
chr4	105888058	105888238	reg1035130.p2	3.383	+	AK127778 AK311455 TSC_hg19_v1_chr4_-_105416052 CR627201	-472095	-	AF272159 BC119751 BC119752 NM_025212 TSC_hg19_v1_chr4_-_105412494	-475666	-	BC095527 AY462099 BC121806 BC122551 M89473 NM_001059	-1247248	-	BX640738 NM_017628	178883	+	TSC_hg19_v1_chr4_+_106067844 NM_001127208	179663	+	TSC_hg19_v1_chr4_+_106068032 AK055149 BC150180 BC150201	179896	+	AK127778|CXXC4|80319|CXXC finger protein 4##AF272159|CXXC4|80319|CXXC finger protein 4##BC119751|CXXC4|80319|CXXC finger protein 4##BC119752|CXXC4|80319|CXXC finger protein 4##NM_025212|CXXC4|80319|CXXC finger protein 4##BC095527|TACR3|6870|tachykinin receptor 3##AY462099|TACR3|6870|tachykinin receptor 3##BC121806|TACR3|6870|tachykinin receptor 3##BC122551|TACR3|6870|tachykinin receptor 3##M89473|TACR3|6870|tachykinin receptor 3##NM_001059|TACR3|6870|tachykinin receptor 3##BX640738|TET2|54790|tet methylcytosine dioxygenase 2##NM_017628|TET2|54790|tet methylcytosine dioxygenase 2##NM_001127208|TET2|54790|tet methylcytosine dioxygenase 2##AK055149|TET2|54790|tet methylcytosine dioxygenase 2##BC150180|TET2|54790|tet methylcytosine dioxygenase 2##BC150201|TET2|54790|tet methylcytosine dioxygenase 2	0.0	
chr4	119604071	119604144	reg1023809.p1	3.383	+	TSC_hg19_v1_chr4_+_119512929 AK024248	-91173	+	TSC_hg19_v1_chr4_-_119273910 AJ001531 BC007761 NM_003619	-330182	-	TSC_hg19_v1_chr4_+_119199912 BC017993 BC039555	-404190	+	TSC_hg19_v1_chr4_+_119606557 AK055555 AB046847 BC006565 BC007449 NM_020961 AB384254 CU675451	2504	+	TSC_hg19_v1_chr4_-_119757254 AK291765 AB018298 BC035761	153120	-	TSC_hg19_v1_chr4_-_119757290 NM_014822	153234	-	AK024248|LOC729218|729218|uncharacterized LOC729218##AJ001531|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC007761|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##NM_003619|PRSS12|8492|protease, serine, 12 (neurotrypsin, motopsin)##BC017993|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##BC039555|SNHG8|100093630|small nucleolar RNA host gene 8 (non-protein coding)##AK055555|METTL14|57721|methyltransferase like 14##AB046847|METTL14|57721|methyltransferase like 14##BC006565|METTL14|57721|methyltransferase like 14##BC007449|METTL14|57721|methyltransferase like 14##NM_020961|METTL14|57721|methyltransferase like 14##AK291765|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##AB018298|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##BC035761|SEC24D|9871|SEC24 family, member D (S. cerevisiae)##NM_014822|SEC24D|9871|SEC24 family, member D (S. cerevisiae)	0.0	
chr7	126342379	126342512	reg1030444.p1	3.383	+	NM_001042594 NM_015450	-1772409	-	BC130600 BC130604 NM_001024603	-1911643	-	BC040007 NM_005302 TSC_hg19_v1_chr7_-_124405847	-1936649	-	NM_000845	541123	-	TSC_hg19_v1_chr7_-_126892310 AK315203 NM_001127323	549920	-	TSC_hg19_v1_chr7_-_126893165 AK290197	550707	-	NM_001042594|POT1|25913|protection of telomeres 1 homolog (S. pombe)##NM_015450|POT1|25913|protection of telomeres 1 homolog (S. pombe)##BC130600|LOC154872|154872|uncharacterized LOC154872##BC130604|LOC154872|154872|uncharacterized LOC154872##NM_001024603|LOC154872|154872|uncharacterized LOC154872##BC040007|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_005302|GPR37|2861|G protein-coupled receptor 37 (endothelin receptor type B-like)##NM_000845|GRM8|2918|glutamate receptor, metabotropic 8##AK315203|GRM8|2918|glutamate receptor, metabotropic 8##NM_001127323|GRM8|2918|glutamate receptor, metabotropic 8##AK290197|GRM8|2918|glutamate receptor, metabotropic 8	0.0	
chr8	22926567	22926741	reg1037499.p2	3.383	+	TSC_hg19_v1_chr8_-_22926545 AF192548 AF016266 AF016268 AF153687 AK291216 AF012535 AF016849 AY358277 BX538104 AK298602 BC001281 NM_003842 NM_147187	-60	-	AB451272 AB451399 AF012628 AF018657 AF018658 AF020501 AF022386 CR541898 AB385139 TSC_hg19_v1_chr8_-_22926429	-235	-	TSC_hg19_v1_chr8_+_22857415 AK292863 AY009093	-69217	+	NM_003841 AK298664 BC017852 TSC_hg19_v1_chr8_+_22960433 AK313213 AK298718 AF012536 AY358281 AF016267 AF033854 AF014794 BC125041 BC125042 AF020502 AF012629 CR541857	33826	+	AF023849 AF021232 AF021233 AF029761 AY358285 BC052270 AK313528 NM_003840 TSC_hg19_v1_chr8_-_23021544	94841	-	FJ795027 AB590225 BT006906 CU680426 DQ891791 DQ894973 JF729355 U90875 TSC_hg19_v1_chr8_-_23082598 AK291299 BC012866	155958	-	AF192548|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016266|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016268|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF153687|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK291216|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012535|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF016849|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AY358277|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BX538104|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK298602|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##BC001281|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_003842|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##NM_147187|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AB451272|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AB451399|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF012628|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018657|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF018658|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF020501|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AF022386|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##CR541898|TNFRSF10B|8795|tumor necrosis factor receptor superfamily, member 10b##AK292863|RHOBTB2|23221|Rho-related BTB domain containing 2##AY009093|RHOBTB2|23221|Rho-related BTB domain containing 2##NM_003841|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298664|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC017852|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK313213|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AK298718|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012536|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AY358281|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF016267|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF033854|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF014794|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125041|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##BC125042|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF020502|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF012629|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##CR541857|TNFRSF10C|8794|tumor necrosis factor receptor superfamily, member 10c, decoy without an intracellular domain##AF023849|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF021232|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF021233|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AF029761|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AY358285|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##BC052270|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##AK313528|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##NM_003840|TNFRSF10D|8793|tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain##FJ795027|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BT006906|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ891791|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##DQ894973|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##JF729355|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##U90875|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##AK291299|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a##BC012866|TNFRSF10A|8797|tumor necrosis factor receptor superfamily, member 10a	0.0	
chr8	61829326	61829506	reg1022079.p2	3.383	+	BC053890 TSC_hg19_v1_chr8_+_61591379 BC110818 BC033116 BC041018 BC014681	-238014	+	TSC_hg19_v1_chr8_+_61591302 NM_017780 BC068000	-238128	+	TSC_hg19_v1_chr8_+_61429737 M28213 AB528604 CU679191 AF498930 BT019695	-399666	+	NM_173519 AF445194 BC048992 AK091641 AX747107 BC042617 AY094971 AK313040	371134	+	AF184241 AF306765 AF224469 BC144362 BC144363 AF224468 AK304314 AK295528 TSC_hg19_v1_chr8_-_62602371 NM_001164750 NM_001164751 NM_001164752 NM_001164753 NM_020164 NM_032467 NM_032468	772930	-	CU688200 FJ461473 AF289489 S83325 EU718494 U03109 AK291836 TSC_hg19_v1_chr8_-_62627101 BC142967 BC066929	797602	-	BC053890|CHD7|55636|chromodomain helicase DNA binding protein 7##BC110818|CHD7|55636|chromodomain helicase DNA binding protein 7##BC033116|CHD7|55636|chromodomain helicase DNA binding protein 7##BC041018|CHD7|55636|chromodomain helicase DNA binding protein 7##BC014681|CHD7|55636|chromodomain helicase DNA binding protein 7##NM_017780|CHD7|55636|chromodomain helicase DNA binding protein 7##BC068000|CHD7|55636|chromodomain helicase DNA binding protein 7##M28213|RAB2A|5862|RAB2A, member RAS oncogene family##AF498930|RAB2A|5862|RAB2A, member RAS oncogene family##BT019695|RAB2A|5862|RAB2A, member RAS oncogene family##NM_173519|CLVS1|157807|clavesin 1##AF445194|CLVS1|157807|clavesin 1##BC048992|CLVS1|157807|clavesin 1##AK091641|CLVS1|157807|clavesin 1##BC042617|CLVS1|157807|clavesin 1##AY094971|CLVS1|157807|clavesin 1##AK313040|CLVS1|157807|clavesin 1##AF184241|ASPH|444|aspartate beta-hydroxylase##AF306765|ASPH|444|aspartate beta-hydroxylase##AF224469|ASPH|444|aspartate beta-hydroxylase##BC144362|ASPH|444|aspartate beta-hydroxylase##BC144363|ASPH|444|aspartate beta-hydroxylase##AF224468|ASPH|444|aspartate beta-hydroxylase##AK304314|ASPH|444|aspartate beta-hydroxylase##AK295528|ASPH|444|aspartate beta-hydroxylase##NM_001164750|ASPH|444|aspartate beta-hydroxylase##NM_001164751|ASPH|444|aspartate beta-hydroxylase##NM_001164752|ASPH|444|aspartate beta-hydroxylase##NM_001164753|ASPH|444|aspartate beta-hydroxylase##NM_020164|ASPH|444|aspartate beta-hydroxylase##NM_032467|ASPH|444|aspartate beta-hydroxylase##NM_032468|ASPH|444|aspartate beta-hydroxylase##FJ461473|ASPH|444|aspartate beta-hydroxylase##AF289489|ASPH|444|aspartate beta-hydroxylase##S83325|ASPH|444|aspartate beta-hydroxylase##EU718494|ASPH|444|aspartate beta-hydroxylase##U03109|ASPH|444|aspartate beta-hydroxylase##AK291836|ASPH|444|aspartate beta-hydroxylase##BC142967|ASPH|444|aspartate beta-hydroxylase##BC066929|ASPH|444|aspartate beta-hydroxylase	0.0	
chr10	119825889	119825962	reg1044898.p2	3.382	+	BC036393 TSC_hg19_v1_chr10_+_119806514 AJ535622 AK055184 BC112326 BC112326 AY226450 AY226451 AY226451 AJ344228 AJ344228 AJ535620 AJ535620 AJ535621	-19495	+	DQ013303 BC075073 BC075074 TSC_hg19_v1_chr10_-_119806407 AB023158 AY037299 NM_014904	-19881	-	TSC_hg19_v1_chr10_+_119302713 AB463605	-523182	+	TSC_hg19_v1_chr10_-_120101833 AK023250 BC023577 AK026630 NM_001134672 NM_022063	275899	-	AK313269 AK290461 NM_004248	529233	-	CU691560 TSC_hg19_v1_chr10_-_120514298	688362	-	BC036393|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535622|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AK055184|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##BC112326|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226450|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AY226451|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ344228|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535620|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##AJ535621|CASC2|255082|cancer susceptibility candidate 2 (non-protein coding)##DQ013303|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075073|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##BC075074|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AB023158|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AY037299|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##NM_014904|RAB11FIP2|22841|RAB11 family interacting protein 2 (class I)##AK023250|FAM204A|63877|family with sequence similarity 204, member A##BC023577|FAM204A|63877|family with sequence similarity 204, member A##AK026630|FAM204A|63877|family with sequence similarity 204, member A##NM_001134672|FAM204A|63877|family with sequence similarity 204, member A##NM_022063|FAM204A|63877|family with sequence similarity 204, member A##AK313269|PRLHR|2834|prolactin releasing hormone receptor##AK290461|PRLHR|2834|prolactin releasing hormone receptor##NM_004248|PRLHR|2834|prolactin releasing hormone receptor	0.0	
chr10	12390854	12391001	reg1035902.p2	3.382	+	TSC_hg19_v1_chr10_+_12238212 BC001600 AK289362 CR456966	-152701	+	TSC_hg19_v1_chr10_+_12238194 BC009598	-152728	+	TSC_hg19_v1_chr10_+_12238186 U27112 AK308790	-152745	+	TSC_hg19_v1_chr10_+_12391574 AK289393 NM_020397 NM_153498 AB081726	648	+	TSC_hg19_v1_chr10_+_12391709 BC035745	790	+	TSC_hg19_v1_chr10_+_12391810 AF286366 AB528894 CU690184 DQ892464 DQ895676	850	+	BC001600|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289362|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##CR456966|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##BC009598|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##U27112|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK308790|CDC123|8872|cell division cycle 123 homolog (S. cerevisiae)##AK289393|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_020397|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##NM_153498|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AB081726|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##BC035745|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##AF286366|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ892464|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID##DQ895676|CAMK1D|57118|calcium/calmodulin-dependent protein kinase ID	0.0	
chr10	79188664	79188769	reg1042292.p1	3.382	+	AF267860 NM_032024	-1646198	+	TSC_hg19_v1_chr10_-_77161541 AK290311	-2027151	-	BC011625 AK225851 TSC_hg19_v1_chr10_-_77161523 BC007494 NM_032772	-2027235	-	AF118141 TSC_hg19_v1_chr10_-_79397246	208509	-	U11058 AB113575 AF025999 AB113382 AY040849 U11717 TSC_hg19_v1_chr10_-_79397382	208620	-	TSC_hg19_v1_chr10_-_79397394 AB524033 U23767	208690	-	AF267860|C10orf11|83938|chromosome 10 open reading frame 11##NM_032024|C10orf11|83938|chromosome 10 open reading frame 11##AK290311|ZNF503|84858|zinc finger protein 503##BC011625|ZNF503|84858|zinc finger protein 503##AK225851|ZNF503|84858|zinc finger protein 503##BC007494|ZNF503|84858|zinc finger protein 503##NM_032772|ZNF503|84858|zinc finger protein 503##AF118141|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11058|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113575|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AF025999|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB113382|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AY040849|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U11717|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##AB524033|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1##U23767|KCNMA1|3778|potassium large conductance calcium-activated channel, subfamily M, alpha member 1	0.063121	
chr1	12217487	12217641	reg1041855.p2	3.382	+	D86042 BC063482 NM_152942 BC073839 BC141804	-31548	+	M83554 NM_001243 BC136400 BC171762 S75768	-94020	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-137994	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	9497	+	TSC_hg19_v1_chr1_+_12227079 AY148473 AB590591 CU690944 BT019927 EU826615	9547	+	TSC_hg19_v1_chr1_+_12290088 NM_015378 NM_018156 AJ608774 AJ608775 AL162331	72543	+	D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##AY148473|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BT019927|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##EU826615|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_015378|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##NM_018156|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608774|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AJ608775|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)##AL162331|VPS13D|55187|vacuolar protein sorting 13 homolog D (S. cerevisiae)	0.0	
chr1	156470794	156470860	reg1019869.p1	3.382	+	AK310187 TSC_hg19_v1_chr1_-_156470568	-259	-	TSC_hg19_v1_chr1_-_156470563 BC018985 BC032479 AB210005 BC064988	-277	-	TSC_hg19_v1_chr1_-_156470522 BC054520 NM_005920 AK308641	-309	-	AY253300 TSC_hg19_v1_chr1_-_156542352 AB105103 BC131536 BC033549 NM_178229	71535	-	NM_001105669	78691	+	TSC_hg19_v1_chr1_+_156561567 AK294835 AK298222 BC056917 NM_144772 AJ315849 BC100931 BC100932 BC100933 BC100934	90728	+	AK310187|MEF2D|4209|myocyte enhancer factor 2D##BC018985|MEF2D|4209|myocyte enhancer factor 2D##BC032479|MEF2D|4209|myocyte enhancer factor 2D##AB210005|MEF2D|4209|myocyte enhancer factor 2D##BC054520|MEF2D|4209|myocyte enhancer factor 2D##NM_005920|MEF2D|4209|myocyte enhancer factor 2D##AK308641|MEF2D|4209|myocyte enhancer factor 2D##AY253300|IQGAP3|128239|IQ motif containing GTPase activating protein 3##AB105103|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC131536|IQGAP3|128239|IQ motif containing GTPase activating protein 3##BC033549|IQGAP3|128239|IQ motif containing GTPase activating protein 3##NM_178229|IQGAP3|128239|IQ motif containing GTPase activating protein 3##NM_001105669|TTC24|164118|tetratricopeptide repeat domain 24##AK294835|APOA1BP|128240|apolipoprotein A-I binding protein##AK298222|APOA1BP|128240|apolipoprotein A-I binding protein##BC056917|APOA1BP|128240|apolipoprotein A-I binding protein##NM_144772|APOA1BP|128240|apolipoprotein A-I binding protein##AJ315849|APOA1BP|128240|apolipoprotein A-I binding protein##BC100931|APOA1BP|128240|apolipoprotein A-I binding protein##BC100932|APOA1BP|128240|apolipoprotein A-I binding protein##BC100933|APOA1BP|128240|apolipoprotein A-I binding protein##BC100934|APOA1BP|128240|apolipoprotein A-I binding protein	0.0	
chr12	92825072	92825182	reg1036431.p1	3.382	+	AJ845168 NM_001025232	-3204	-	AJ845165 AJ845166 NM_001025233	-7393	+	BC016759 BC064953 X61123 TSC_hg19_v1_chr12_-_92539622 AK313309 AK307057 NM_001731	-285484	-	NM_001037671 NM_001178097	271491	+	NM_001004330 AK128530	305160	+	X78998 TSC_hg19_v1_chr12_-_93322931 L40157	497811	-	AJ845168|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##NM_001025232|CLLU1OS|574016|chronic lymphocytic leukemia up-regulated 1 opposite strand##AJ845165|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##AJ845166|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##NM_001025233|CLLU1|574028|chronic lymphocytic leukemia up-regulated 1##BC016759|BTG1|694|B-cell translocation gene 1, anti-proliferative##BC064953|BTG1|694|B-cell translocation gene 1, anti-proliferative##X61123|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK313309|BTG1|694|B-cell translocation gene 1, anti-proliferative##AK307057|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001731|BTG1|694|B-cell translocation gene 1, anti-proliferative##NM_001037671|C12orf74|338809|chromosome 12 open reading frame 74##NM_001178097|C12orf74|338809|chromosome 12 open reading frame 74##NM_001004330|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##AK128530|PLEKHG7|440107|pleckstrin homology domain containing, family G (with RhoGef domain) member 7##X78998|EEA1|8411|early endosome antigen 1##L40157|EEA1|8411|early endosome antigen 1	0.037882	
chr14	77500476	77500583	reg1036931.p2	3.382	+	TSC_hg19_v1_chr14_-_77495043 NM_024496 BC108292	-5469	-	AB058768 BC152431 TSC_hg19_v1_chr14_-_77494748	-5845	-	AK058106 NM_194287 AK125722 AK301762 BC062799 BC121159 BC121160	-207734	+	AK124327 TSC_hg19_v1_chr14_-_77542533	42004	-	TSC_hg19_v1_chr14_+_77564625 NM_033426 AK315124 BC037300 AK096603 AL834514	64116	+	BC117676 TSC_hg19_v1_chr14_-_77608072	107486	-	NM_024496|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##BC108292|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AB058768|IRF2BPL|64207|interferon regulatory factor 2 binding protein-like##AK058106|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_194287|C14orf166B|145497|chromosome 14 open reading frame 166B##AK125722|C14orf166B|145497|chromosome 14 open reading frame 166B##AK301762|C14orf166B|145497|chromosome 14 open reading frame 166B##BC062799|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121159|C14orf166B|145497|chromosome 14 open reading frame 166B##BC121160|C14orf166B|145497|chromosome 14 open reading frame 166B##NM_033426|KIAA1737|85457|KIAA1737##AK315124|KIAA1737|85457|KIAA1737##BC037300|KIAA1737|85457|KIAA1737##AK096603|KIAA1737|85457|KIAA1737##AL834514|KIAA1737|85457|KIAA1737##BC117676|ZDHHC22|283576|zinc finger, DHHC-type containing 22	0.829795	CTCF.p2:-72:0.830
chr17	57906818	57906969	reg1024934.p2	3.382	+	TSC_hg19_v1_chr17_+_57785080 AK293664	-121820	+	AK294854 TSC_hg19_v1_chr17_+_57785025 AF214006 AX775965	-121858	+	BC009758 TSC_hg19_v1_chr17_+_57785014 AK024969	-121877	+	TSC_hg19_v1_chr17_+_57915291 AK310806	8413	+	AK024096 AK298492 AK301312 BC000258 AK022771 AK315172 NM_001193609 NM_001193610 NM_001193611 NM_001193612 NM_001193613 NM_016261	63298	-	NM_003161 BC036033 TSC_hg19_v1_chr17_+_57970481 AK293247	63569	+	AK293664|VMP1|81671|vacuole membrane protein 1##AK294854|VMP1|81671|vacuole membrane protein 1##AF214006|VMP1|81671|vacuole membrane protein 1##AX775965|VMP1|81671|vacuole membrane protein 1##BC009758|VMP1|81671|vacuole membrane protein 1##AK024969|VMP1|81671|vacuole membrane protein 1##AK024096|TUBD1|51174|tubulin, delta 1##AK298492|TUBD1|51174|tubulin, delta 1##AK301312|TUBD1|51174|tubulin, delta 1##BC000258|TUBD1|51174|tubulin, delta 1##AK022771|TUBD1|51174|tubulin, delta 1##AK315172|TUBD1|51174|tubulin, delta 1##NM_001193609|TUBD1|51174|tubulin, delta 1##NM_001193610|TUBD1|51174|tubulin, delta 1##NM_001193611|TUBD1|51174|tubulin, delta 1##NM_001193612|TUBD1|51174|tubulin, delta 1##NM_001193613|TUBD1|51174|tubulin, delta 1##NM_016261|TUBD1|51174|tubulin, delta 1##NM_003161|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##BC036033|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1##AK293247|RPS6KB1|6198|ribosomal protein S6 kinase, 70kDa, polypeptide 1	0.0	
chr17	75136542	75136643	reg1036569.p1	3.382	+	NM_001204410 FM995496 AF130050	-51324	+	NM_001204408 BX648413 TSC_hg19_v1_chr17_+_75084834 FM995495 FM995497 FM995498 FN357117 FN357118 FN357119 FN357120 FN357121 FN357125 FN357122 FN357123 FN357126	-51795	+	AB114297 NM_198955 BC144361	-267832	+	TSC_hg19_v1_chr17_+_75137073 NM_001039573 NM_001143998 NM_001143999 NM_003003 AB208811 D67029 BX537448	442	+	TSC_hg19_v1_chr17_+_75137104 AK290913 BC142979 BC136523 BC136525	543	+	AK293206 NM_001144001	44702	+	NM_001204410|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995496|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AF130050|LINC00338|654434|long intergenic non-protein coding RNA 338##NM_001204408|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX648413|LINC00338|654434|long intergenic non-protein coding RNA 338##FM995495|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995497|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FM995498|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##FN357117|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357118|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357121|LINC00338|654434|long intergenic non-protein coding RNA 338##FN357125|LINC00338|654434|long intergenic non-protein coding RNA 338##AB114297|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_198955|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##BC144361|MGAT5B|146664|mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B##NM_001039573|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143998|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001143999|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_003003|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AB208811|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##D67029|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BX537448|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AK290913|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC142979|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136523|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##BC136525|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##AK293206|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)##NM_001144001|SEC14L1|6397|SEC14-like 1 (S. cerevisiae)	0.0	
chr19	55875356	55875455	reg1046090.p1	3.382	+	TSC_hg19_v1_chr19_-_55874621 BC031875 AK127979 NM_001145402	-791	-	BC064548 AK057427 AY152398 BC026123 NM_144613	-9283	-	AK308586 NM_032701 TSC_hg19_v1_chr19_+_55851243 AK304562 BC044889	-24145	+	X58377 BC012506 M57765 NM_000641 AK290572 AK298973 AK315294	6380	-	AF442729 BC128189 BC128190 NM_139172	12798	+	BC052596 NM_001190764 TSC_hg19_v1_chr19_-_55895661	20233	-	BC031875|FAM71E2|284418|family with sequence similarity 71, member E2##AK127979|FAM71E2|284418|family with sequence similarity 71, member E2##NM_001145402|FAM71E2|284418|family with sequence similarity 71, member E2##BC064548|COX6B2|125965|cytochrome c oxidase subunit VIb polypeptide 2 (testis)##AK057427|COX6B2|125965|cytochrome c oxidase subunit VIb polypeptide 2 (testis)##AY152398|COX6B2|125965|cytochrome c oxidase subunit VIb polypeptide 2 (testis)##BC026123|COX6B2|125965|cytochrome c oxidase subunit VIb polypeptide 2 (testis)##NM_144613|COX6B2|125965|cytochrome c oxidase subunit VIb polypeptide 2 (testis)##AK308586|SUV420H2|84787|suppressor of variegation 4-20 homolog 2 (Drosophila)##NM_032701|SUV420H2|84787|suppressor of variegation 4-20 homolog 2 (Drosophila)##AK304562|SUV420H2|84787|suppressor of variegation 4-20 homolog 2 (Drosophila)##BC044889|SUV420H2|84787|suppressor of variegation 4-20 homolog 2 (Drosophila)##X58377|IL11|3589|interleukin 11##BC012506|IL11|3589|interleukin 11##M57765|IL11|3589|interleukin 11##NM_000641|IL11|3589|interleukin 11##AK290572|IL11|3589|interleukin 11##AK298973|IL11|3589|interleukin 11##AK315294|IL11|3589|interleukin 11##AF442729|TMEM190|147744|transmembrane protein 190##BC128189|TMEM190|147744|transmembrane protein 190##BC128190|TMEM190|147744|transmembrane protein 190##NM_139172|TMEM190|147744|transmembrane protein 190##BC052596|TMEM238|388564|transmembrane protein 238##NM_001190764|TMEM238|388564|transmembrane protein 238	0.0	
chr21	23123762	23123860	reg1041319.p2	3.382	+	TSC_hg19_v1_chr21_+_22370726 BC036088 U75330	-753038	+	TSC_hg19_v1_chr21_+_22370694 AK299054	-753121	+	TSC_hg19_v1_chr21_+_22370656 BC052946 NM_004540	-753169	+	TSC_hg19_v1_chr21_+_25801061 AK124194 BX538159	2677257	+	TSC_hg19_v1_chr21_+_26934442 AF402776	3810661	+	BC004896 AF109357 TSC_hg19_v1_chr21_-_26979794 AF239727 AK000458 AK225878 BC107719 NM_017446 NM_080794	3856004	-	BC036088|NCAM2|4685|neural cell adhesion molecule 2##U75330|NCAM2|4685|neural cell adhesion molecule 2##AK299054|NCAM2|4685|neural cell adhesion molecule 2##BC052946|NCAM2|4685|neural cell adhesion molecule 2##NM_004540|NCAM2|4685|neural cell adhesion molecule 2##AK124194|FLJ42200|400860|FLJ42200 protein##AF402776|MIR155HG|114614|MIR155 host gene (non-protein coding)##BC004896|MRPL39|54148|mitochondrial ribosomal protein L39##AF109357|MRPL39|54148|mitochondrial ribosomal protein L39##AF239727|MRPL39|54148|mitochondrial ribosomal protein L39##AK000458|MRPL39|54148|mitochondrial ribosomal protein L39##AK225878|MRPL39|54148|mitochondrial ribosomal protein L39##BC107719|MRPL39|54148|mitochondrial ribosomal protein L39##NM_017446|MRPL39|54148|mitochondrial ribosomal protein L39##NM_080794|MRPL39|54148|mitochondrial ribosomal protein L39	0.0	
chr2	234357029	234357147	reg1036683.p1	3.382	+	D73409 NM_003648	-60289	+	TSC_hg19_v1_chr2_+_234263153 D63479	-93876	+	TSC_hg19_v1_chr2_+_234263150 AB078966 NM_152879	-93942	+	AK001647 AJ583821 NM_018218	117128	-	TSC_hg19_v1_chr2_-_234475429 BC067300 AK295112	118329	-	AF462268 NM_019076 AK313488 AF462267 AF030310 AY435143	169233	+	D73409|DGKD|8527|diacylglycerol kinase, delta 130kDa##NM_003648|DGKD|8527|diacylglycerol kinase, delta 130kDa##D63479|DGKD|8527|diacylglycerol kinase, delta 130kDa##AB078966|DGKD|8527|diacylglycerol kinase, delta 130kDa##NM_152879|DGKD|8527|diacylglycerol kinase, delta 130kDa##AK001647|USP40|55230|ubiquitin specific peptidase 40##AJ583821|USP40|55230|ubiquitin specific peptidase 40##NM_018218|USP40|55230|ubiquitin specific peptidase 40##BC067300|USP40|55230|ubiquitin specific peptidase 40##AK295112|USP40|55230|ubiquitin specific peptidase 40##AF462268|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##NM_019076|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AK313488|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AF462267|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AF030310|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8##AY435143|UGT1A8|54576|UDP glucuronosyltransferase 1 family, polypeptide A8	0.923272	CTCF.p2:0:0.923
chr3	100185036	100185139	reg1038577.p2	3.382	+	BC052994 BC065555 NM_014820 AK302796	-64834	-	BC040562 NM_001085451	-65051	+	AB018262 BC003633 TSC_hg19_v1_chr3_-_100119948	-65159	-	TSC_hg19_v1_chr3_+_100211440 AK000996 AY450392 NM_018004	26366	+	TSC_hg19_v1_chr3_+_100211558 AK129789	26496	+	BC040355 TSC_hg19_v1_chr3_+_100238088	52988	+	BC052994|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##BC065555|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##NM_014820|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##AK302796|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##BC040562|LNP1|348801|leukemia NUP98 fusion partner 1##NM_001085451|LNP1|348801|leukemia NUP98 fusion partner 1##AB018262|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##BC003633|TOMM70A|9868|translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)##AK000996|TMEM45A|55076|transmembrane protein 45A##AY450392|TMEM45A|55076|transmembrane protein 45A##NM_018004|TMEM45A|55076|transmembrane protein 45A##AK129789|TMEM45A|55076|transmembrane protein 45A##BC040355|TMEM45A|55076|transmembrane protein 45A	0.0	
chr3	192568585	192568680	reg1036388.p1	3.382	+	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	-123267	-	AK125307 NM_021032 TSC_hg19_v1_chr3_-_192126847	-441789	-	AY858112 NM_001083308	-1389681	+	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	67004	-	BC036194 BC045582 NM_178496	67309	-	TSC_hg19_v1_chr3_+_192958897 BC048095 NM_020386	390272	+	AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##AK125307|FGF12|2257|fibroblast growth factor 12##NM_021032|FGF12|2257|fibroblast growth factor 12##AY858112|PYDC2|152138|pyrin domain containing 2##NM_001083308|PYDC2|152138|pyrin domain containing 2##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2##BC048095|HRASLS|57110|HRAS-like suppressor##NM_020386|HRASLS|57110|HRAS-like suppressor	0.0	
chr4	26090387	26090531	reg1037455.p2	3.382	+	TSC_hg19_v1_chr4_+_25915869 NM_001145432 BC032431 BC086307 BC006003 BC046171 BC062747 BC014348 BC040154	-174595	+	TSC_hg19_v1_chr4_-_25864611 BC060867 NM_015187	-225905	-	NM_001177999 AK314514	-432369	+	L07875 BC020780 NM_005349 NM_203283	230860	+	L07874 L07872 AK303244 AK311419 AB527795 NM_015874 NM_203284 TSC_hg19_v1_chr4_+_26322435	231850	+	TSC_hg19_v1_chr4_+_26322635 AK302230	232177	+	NM_001145432|C4orf52|389203|chromosome 4 open reading frame 52##BC032431|C4orf52|389203|chromosome 4 open reading frame 52##BC086307|C4orf52|389203|chromosome 4 open reading frame 52##BC006003|C4orf52|389203|chromosome 4 open reading frame 52##BC046171|C4orf52|389203|chromosome 4 open reading frame 52##BC062747|C4orf52|389203|chromosome 4 open reading frame 52##BC014348|C4orf52|389203|chromosome 4 open reading frame 52##BC040154|C4orf52|389203|chromosome 4 open reading frame 52##BC060867|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_015187|SEL1L3|23231|sel-1 suppressor of lin-12-like 3 (C. elegans)##NM_001177999|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##AK314514|SLC34A2|10568|solute carrier family 34 (sodium phosphate), member 2##L07875|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##BC020780|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_005349|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203283|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##L07872|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK303244|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK311419|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_015874|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##NM_203284|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region##AK302230|RBPJ|3516|recombination signal binding protein for immunoglobulin kappa J region	0.0	
chr5	175779326	175779422	reg1036744.p2	3.382	+	TSC_hg19_v1_chr5_+_175665384 BC037298 BC066980 NM_198567 AK299336	-113984	+	BC028606 NM_001079529	-267496	+	NM_032361	-383830	-	TSC_hg19_v1_chr5_-_175788768 BC006316 BC010448 BC012848 AK024675 AK225073 AK315428 BC017097 AL390217 BX648859 NM_001079684 NM_001079685 NM_020444	9389	-	TSC_hg19_v1_chr5_+_175792493 BC059361 NM_173664 AK096568	13115	+	HQ257929 AY561704 CR457169 NM_016391 BC032424 TSC_hg19_v1_chr5_-_175815607 BC040106 AK303281 AF161460 AK300883 BC019331	36275	-	BC037298|C5orf25|375484|chromosome 5 open reading frame 25##BC066980|C5orf25|375484|chromosome 5 open reading frame 25##NM_198567|C5orf25|375484|chromosome 5 open reading frame 25##AK299336|C5orf25|375484|chromosome 5 open reading frame 25##BC028606|FAM153B|202134|family with sequence similarity 153, member B##NM_001079529|FAM153B|202134|family with sequence similarity 153, member B##NM_032361|THOC3|84321|THO complex 3##BC006316|KIAA1191|57179|KIAA1191##BC010448|KIAA1191|57179|KIAA1191##BC012848|KIAA1191|57179|KIAA1191##AK315428|KIAA1191|57179|KIAA1191##BC017097|KIAA1191|57179|KIAA1191##AL390217|KIAA1191|57179|KIAA1191##BX648859|KIAA1191|57179|KIAA1191##NM_001079684|KIAA1191|57179|KIAA1191##NM_001079685|KIAA1191|57179|KIAA1191##NM_020444|KIAA1191|57179|KIAA1191##BC059361|ARL10|285598|ADP-ribosylation factor-like 10##NM_173664|ARL10|285598|ADP-ribosylation factor-like 10##HQ257929|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##AY561704|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##CR457169|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##NM_016391|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##BC032424|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##BC040106|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##AK303281|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##AF161460|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##AK300883|NOP16|51491|NOP16 nucleolar protein homolog (yeast)##BC019331|NOP16|51491|NOP16 nucleolar protein homolog (yeast)	0.0	
chr6	87569400	87569505	reg1040026.p2	3.382	+	BC009220 BC108291 AK311192 TSC_hg19_v1_chr6_-_86388452	-1181015	-	TSC_hg19_v1_chr6_-_86353055 AF037448 NM_001159677 NM_006372	-1216427	-	TSC_hg19_v1_chr6_-_86352716 AF155568	-1216737	-	NM_000865	77571	+	V00518 AK023644 AK311972 BC055080 BC010957 BC020782 NM_000735 NM_001252383	235366	-	TSC_hg19_v1_chr6_+_87865282 NM_015021 AK123473 BX537746 CR936740	295837	+	BC009220|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##BC108291|SNHG5|387066|small nucleolar RNA host gene 5 (non-protein coding)##AF037448|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_001159677|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_006372|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##AF155568|SYNCRIP|10492|synaptotagmin binding, cytoplasmic RNA interacting protein##NM_000865|HTR1E|3354|5-hydroxytryptamine (serotonin) receptor 1E##V00518|CGA|1081|glycoprotein hormones, alpha polypeptide##AK311972|CGA|1081|glycoprotein hormones, alpha polypeptide##BC055080|CGA|1081|glycoprotein hormones, alpha polypeptide##BC010957|CGA|1081|glycoprotein hormones, alpha polypeptide##BC020782|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_000735|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_001252383|CGA|1081|glycoprotein hormones, alpha polypeptide##NM_015021|ZNF292|23036|zinc finger protein 292##AK123473|ZNF292|23036|zinc finger protein 292##BX537746|ZNF292|23036|zinc finger protein 292	0.021203	
chr7	38468463	38468617	reg1037104.p2	3.382	+	TSC_hg19_v1_chr7_-_38389583 BC035592	-78951	-	Y00482 TSC_hg19_v1_chr7_-_38389512	-79064	-	TSC_hg19_v1_chr7_-_38375202 AK291611 BC027954	-93336	-	AF498097 CU689866 BC034376 AK291447 TSC_hg19_v1_chr7_-_38670974	202422	-	TSC_hg19_v1_chr7_-_38671019 X81438 AF034996 NM_001635 NM_139316	202537	-	HQ257912 TSC_hg19_v1_chr7_-_38948792 BX648347 BC044851 AK314556 NM_014396 NM_080631 U87309	480253	-	BC035592|TRGV5|6978|T cell receptor gamma variable 5##BC027954|TRGV7|6981|T cell receptor gamma variable 7 (pseudogene)##AF498097|AMPH|273|amphiphysin##BC034376|AMPH|273|amphiphysin##AK291447|AMPH|273|amphiphysin##X81438|AMPH|273|amphiphysin##AF034996|AMPH|273|amphiphysin##NM_001635|AMPH|273|amphiphysin##NM_139316|AMPH|273|amphiphysin##HQ257912|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BX648347|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##BC044851|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##AK314556|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_014396|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##NM_080631|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)##U87309|VPS41|27072|vacuolar protein sorting 41 homolog (S. cerevisiae)	0.0	
chr10	120864386	120864498	reg1038678.p1	3.381	+	TSC_hg19_v1_chr10_+_120863628 AF168713 AK000031 AK297633 AK297971 AK293136 BC022271 CU687018 CU692524	-802	+	NM_207009 TSC_hg19_v1_chr10_+_120863621	-825	+	TSC_hg19_v1_chr10_+_120863593 AK293365	-862	+	CU687762 AY269785 TSC_hg19_v1_chr10_-_120925213 AK095295 BC063562 BC050475 NM_213649	60745	-	EF036492 AB527495 BT020007 CR450344 CU678120 AK222659 BC002685 D49396 TSC_hg19_v1_chr10_-_120938325 BC009601 BC059169 BC111397 AK313169 BC008435 BC022373 AK130897 BC007062	73861	-	TSC_hg19_v1_chr10_-_120938340 BC021691 NM_006793 NM_014098	73905	-	AF168713|FAM45A|404636|family with sequence similarity 45, member A##AK000031|FAM45A|404636|family with sequence similarity 45, member A##AK297633|FAM45A|404636|family with sequence similarity 45, member A##AK297971|FAM45B|55855|family with sequence similarity 45, member A pseudogene##AK293136|FAM45A|404636|family with sequence similarity 45, member A##BC022271|FAM45A|404636|family with sequence similarity 45, member A##NM_207009|FAM45A|404636|family with sequence similarity 45, member A##AK293365|FAM45A|404636|family with sequence similarity 45, member A##AY269785|SFXN4|119559|sideroflexin 4##AK095295|SFXN4|119559|sideroflexin 4##BC063562|SFXN4|119559|sideroflexin 4##BC050475|SFXN4|119559|sideroflexin 4##NM_213649|SFXN4|119559|sideroflexin 4##EF036492|PRDX3|10935|peroxiredoxin 3##BT020007|PRDX3|10935|peroxiredoxin 3##CR450344|PRDX3|10935|peroxiredoxin 3##AK222659|PRDX3|10935|peroxiredoxin 3##BC002685|PRDX3|10935|peroxiredoxin 3##D49396|PRDX3|10935|peroxiredoxin 3##BC009601|PRDX3|10935|peroxiredoxin 3##BC059169|PRDX3|10935|peroxiredoxin 3##BC111397|PRDX3|10935|peroxiredoxin 3##AK313169|PRDX3|10935|peroxiredoxin 3##BC008435|PRDX3|10935|peroxiredoxin 3##BC022373|PRDX3|10935|peroxiredoxin 3##AK130897|PRDX3|10935|peroxiredoxin 3##BC007062|PRDX3|10935|peroxiredoxin 3##BC021691|PRDX3|10935|peroxiredoxin 3##NM_006793|PRDX3|10935|peroxiredoxin 3##NM_014098|PRDX3|10935|peroxiredoxin 3	0.0	
chr10	125756961	125757141	reg1038306.p1	3.381	+	BC137492 BC146862 AY358565 NM_198148	-105555	-	AJ505757 NM_153442 BC112011 BC113462	-331174	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-842695	+	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	94848	-	BC050540 TSC_hg19_v1_chr10_-_125853115 AK299546 CR749804	96102	-	TSC_hg19_v1_chr10_-_126107492 M12267 M23204 BC000964 AB208817 BC016928 AK296032 AK312561 AK315947	350422	-	BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##BC050540|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##CR749804|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##M12267|OAT|4942|ornithine aminotransferase##M23204|OAT|4942|ornithine aminotransferase##BC000964|OAT|4942|ornithine aminotransferase##AB208817|OAT|4942|ornithine aminotransferase##BC016928|OAT|4942|ornithine aminotransferase##AK296032|OAT|4942|ornithine aminotransferase##AK312561|OAT|4942|ornithine aminotransferase##AK315947|OAT|4942|ornithine aminotransferase	0.0	
chr11	89408708	89408800	reg1044218.p1	3.381	+	AF261715 NM_153696	-16290	+	AK057189 NM_001143837	-85976	-	AF261943 AJ704725 AJ704726 AJ704727 AJ704728 AJ704729 AY288918 CU691812 AK311389 BC040105 AK291830 AK298376 AF254621 BC034780 AB041035 NM_001143836 NM_016931 BC051371	-184182	-	NM_001146162	34712	+	AB037682 NM_020358	132988	-	NM_001164397	200430	-	AF261715|FOLH1B|219595|folate hydrolase 1B##NM_153696|FOLH1B|219595|folate hydrolase 1B##AK057189|NOX4|50507|NADPH oxidase 4##NM_001143837|NOX4|50507|NADPH oxidase 4##AF261943|NOX4|50507|NADPH oxidase 4##AJ704725|NOX4|50507|NADPH oxidase 4##AJ704726|NOX4|50507|NADPH oxidase 4##AJ704727|NOX4|50507|NADPH oxidase 4##AJ704728|NOX4|50507|NADPH oxidase 4##AJ704729|NOX4|50507|NADPH oxidase 4##AY288918|NOX4|50507|NADPH oxidase 4##AK311389|NOX4|50507|NADPH oxidase 4##BC040105|NOX4|50507|NADPH oxidase 4##AK291830|NOX4|50507|NADPH oxidase 4##AK298376|NOX4|50507|NADPH oxidase 4##AF254621|NOX4|50507|NADPH oxidase 4##AB041035|NOX4|50507|NADPH oxidase 4##NM_001143836|NOX4|50507|NADPH oxidase 4##NM_016931|NOX4|50507|NADPH oxidase 4##BC051371|NOX4|50507|NADPH oxidase 4##NM_001146162|TRIM77P|390231|tripartite motif containing 77, pseudogene##AB037682|TRIM49|57093|tripartite motif containing 49##NM_020358|TRIM49|57093|tripartite motif containing 49##NM_001164397|TRIM64B|642446|tripartite motif containing 64B	0.967721	CTCF.p2:2:0.968
chr12	104924014	104924183	reg1035982.p2	3.381	+	TSC_hg19_v1_chr12_+_104850989 AF239820 AJ289134 AJ269537 CU680560	-73011	+	TSC_hg19_v1_chr12_+_104850784 AB042326	-73290	+	TSC_hg19_v1_chr12_+_104850778 BC013315	-73327	+	TSC_hg19_v1_chr12_+_105153261 AF131762	229179	+	CU691398 AL136828 EU832572 BC106871 BC106872 AK027838 BC036734 NM_032148	398165	-	TSC_hg19_v1_chr12_+_105380107 NM_152318	455992	+	AF239820|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ289134|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AJ269537|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AB042326|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##BC013315|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AF131762|CHST11|50515|carbohydrate (chondroitin 4) sulfotransferase 11##AL136828|SLC41A2|84102|solute carrier family 41, member 2##EU832572|SLC41A2|84102|solute carrier family 41, member 2##BC106871|SLC41A2|84102|solute carrier family 41, member 2##BC106872|SLC41A2|84102|solute carrier family 41, member 2##AK027838|SLC41A2|84102|solute carrier family 41, member 2##BC036734|SLC41A2|84102|solute carrier family 41, member 2##NM_032148|SLC41A2|84102|solute carrier family 41, member 2##NM_152318|C12orf45|121053|chromosome 12 open reading frame 45	0.0	
chr1	25724219	25724314	reg1047125.p1	3.381	+	TSC_hg19_v1_chr1_+_25664821 NM_014313 AK311092 AF087880 AL136627 AK299180 AK311355 AK312588 AY358650 AY071927 BC007341 BC066908 AF081282	-59432	+	AK297151 NM_001127691 NM_016124 X63094 BC139922 AF510069 AF510070 AF312679 Z97026 DQ451878 X63097 AB018966 AB018967 AB018968 AB018969 AB037270 AB046420 AB049754 AF037626 AF177938 AF187846 AJ704215 AM183924 AY449381 AY449382 AY449383 AY449384 AY449385 AY751491 AY751492 AY751493 AY751494 AY751495 AY751496 FR745438 FR745439 FR745440 FR745441 JF436967 L08429 S57971 S70174 S73913 S78509 S82449 EU557240 EU557241 EU661905 EU661906	-125274	+	BC001892 AF267856 AF247168 AK027318 AK292532 AK296798 TSC_hg19_v1_chr1_-_25573946 AK226012 NM_020317	-150293	-	AB018644 AB018645 AB030388 AB049753 AF056965 AF177938 AM295498 AM295506 DQ178642 DQ266353 DQ266400 DQ322275 FR691748 FR691750 GU474431 GU563377 GU810838 HE572747 JF436968 S57967 X63096 X63095 AY603478 X63098 Z97026 BC075081 M34015 AF510065 AF510066 AF510067 AF510068 X54534 NM_020485 NM_138616 NM_138617 NM_138618 BC139905	23074	-	TSC_hg19_v1_chr1_+_25757387 AK311472 NM_018202 AY845015 BC007687 AK001609 AY845035 AY845036 BC032427 BC020801	33219	+	TSC_hg19_v1_chr1_+_25870097 AK091219 NM_015627	145825	+	NM_014313|TMEM50A|23585|transmembrane protein 50A##AK311092|TMEM50A|23585|transmembrane protein 50A##AF087880|TMEM50A|23585|transmembrane protein 50A##AL136627|TMEM50A|23585|transmembrane protein 50A##AK299180|TMEM50A|23585|transmembrane protein 50A##AK311355|TMEM50A|23585|transmembrane protein 50A##AK312588|TMEM50A|23585|transmembrane protein 50A##AY358650|TMEM50A|23585|transmembrane protein 50A##AY071927|TMEM50A|23585|transmembrane protein 50A##BC007341|TMEM50A|23585|transmembrane protein 50A##BC066908|TMEM50A|23585|transmembrane protein 50A##AF081282|TMEM50A|23585|transmembrane protein 50A##AK297151|RHD|6007|Rh blood group, D antigen##NM_001127691|RHD|6007|Rh blood group, D antigen##NM_016124|RHD|6007|Rh blood group, D antigen##X63094|RHD|6007|Rh blood group, D antigen##BC139922|RHD|6007|Rh blood group, D antigen##AF510069|RHD|6007|Rh blood group, D antigen##AF510070|RHD|6007|Rh blood group, D antigen##AF312679|RHD|6007|Rh blood group, D antigen##Z97026|RHD|6007|Rh blood group, D antigen##DQ451878|RHD|6007|Rh blood group, D antigen##X63097|RHD|6007|Rh blood group, D antigen##AB018966|RHD|6007|Rh blood group, D antigen##AB018967|RHD|6007|Rh blood group, D antigen##AB018968|RHD|6007|Rh blood group, D antigen##AB018969|RHD|6007|Rh blood group, D antigen##AB037270|RHD|6007|Rh blood group, D antigen##AB046420|RHD|6007|Rh blood group, D antigen##AB049754|RHD|6007|Rh blood group, D antigen##AF037626|RHD|6007|Rh blood group, D antigen##AF177938|RHD|6007|Rh blood group, D antigen##AF187846|RHD|6007|Rh blood group, D antigen##AJ704215|RHD|6007|Rh blood group, D antigen##AM183924|RHD|6007|Rh blood group, D antigen##AY449381|RHD|6007|Rh blood group, D antigen##AY449382|RHD|6007|Rh blood group, D antigen##AY449383|RHD|6007|Rh blood group, D antigen##AY449384|RHD|6007|Rh blood group, D antigen##AY449385|RHD|6007|Rh blood group, D antigen##AY751491|RHD|6007|Rh blood group, D antigen##AY751492|RHD|6007|Rh blood group, D antigen##AY751493|RHD|6007|Rh blood group, D antigen##AY751494|RHD|6007|Rh blood group, D antigen##AY751495|RHD|6007|Rh blood group, D antigen##AY751496|RHD|6007|Rh blood group, D antigen##FR745438|RHD|6007|Rh blood group, D antigen##FR745439|RHD|6007|Rh blood group, D antigen##FR745440|RHD|6007|Rh blood group, D antigen##FR745441|RHD|6007|Rh blood group, D antigen##L08429|RHD|6007|Rh blood group, D antigen##S57971|RHD|6007|Rh blood group, D antigen##S70174|RHD|6007|Rh blood group, D antigen##S73913|RHD|6007|Rh blood group, D antigen##S78509|RHD|6007|Rh blood group, D antigen##S82449|RHD|6007|Rh blood group, D antigen##EU557240|RHD|6007|Rh blood group, D antigen##EU557241|RHD|6007|Rh blood group, D antigen##EU661905|RHD|6007|Rh blood group, D antigen##EU661906|RHD|6007|Rh blood group, D antigen##BC001892|C1orf63|57035|chromosome 1 open reading frame 63##AF267856|C1orf63|57035|chromosome 1 open reading frame 63##AF247168|C1orf63|57035|chromosome 1 open reading frame 63##AK027318|C1orf63|57035|chromosome 1 open reading frame 63##AK292532|C1orf63|57035|chromosome 1 open reading frame 63##AK296798|C1orf63|57035|chromosome 1 open reading frame 63##AK226012|C1orf63|57035|chromosome 1 open reading frame 63##NM_020317|C1orf63|57035|chromosome 1 open reading frame 63##AB018644|RHCE|6006|Rh blood group, CcEe antigens##AB018645|RHCE|6006|Rh blood group, CcEe antigens##AB030388|RHCE|6006|Rh blood group, CcEe antigens##AB049753|RHCE|6006|Rh blood group, CcEe antigens##AF056965|RHCE|6006|Rh blood group, CcEe antigens##AF177938|RHD|6007|Rh blood group, D antigen##AM295498|RHCE|6006|Rh blood group, CcEe antigens##AM295506|RHCE|6006|Rh blood group, CcEe antigens##DQ178642|RHCE|6006|Rh blood group, CcEe antigens##DQ266353|RHCE|6006|Rh blood group, CcEe antigens##DQ266400|RHCE|6006|Rh blood group, CcEe antigens##DQ322275|RHCE|6006|Rh blood group, CcEe antigens##FR691748|RHCE|6006|Rh blood group, CcEe antigens##FR691750|RHCE|6006|Rh blood group, CcEe antigens##GU474431|RHCE|6006|Rh blood group, CcEe antigens##GU563377|RHCE|6006|Rh blood group, CcEe antigens##GU810838|RHCE|6006|Rh blood group, CcEe antigens##S57967|RHCE|6006|Rh blood group, CcEe antigens##X63096|RHCE|6006|Rh blood group, CcEe antigens##X63095|RHCE|6006|Rh blood group, CcEe antigens##AY603478|RHCE|6006|Rh blood group, CcEe antigens##X63098|RHCE|6006|Rh blood group, CcEe antigens##Z97026|RHD|6007|Rh blood group, D antigen##BC075081|RHCE|6006|Rh blood group, CcEe antigens##M34015|RHCE|6006|Rh blood group, CcEe antigens##AF510065|RHCE|6006|Rh blood group, CcEe antigens##AF510066|RHCE|6006|Rh blood group, CcEe antigens##AF510067|RHCE|6006|Rh blood group, CcEe antigens##AF510068|RHCE|6006|Rh blood group, CcEe antigens##X54534|RHCE|6006|Rh blood group, CcEe antigens##NM_020485|RHCE|6006|Rh blood group, CcEe antigens##NM_138616|RHCE|6006|Rh blood group, CcEe antigens##NM_138617|RHCE|6006|Rh blood group, CcEe antigens##NM_138618|RHCE|6006|Rh blood group, CcEe antigens##BC139905|RHCE|6006|Rh blood group, CcEe antigens##AK311472|TMEM57|55219|transmembrane protein 57##NM_018202|TMEM57|55219|transmembrane protein 57##AY845015|TMEM57|55219|transmembrane protein 57##BC007687|TMEM57|55219|transmembrane protein 57##AK001609|TMEM57|55219|transmembrane protein 57##AY845035|TMEM57|55219|transmembrane protein 57##AY845036|TMEM57|55219|transmembrane protein 57##BC032427|TMEM57|55219|transmembrane protein 57##BC020801|TMEM57|55219|transmembrane protein 57##AK091219|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1##NM_015627|LDLRAP1|26119|low density lipoprotein receptor adaptor protein 1	0.480583	CTCF.p2:-1:0.481
chr1	32828672	32828739	reg1032396.p1	3.381	+	NM_001167676	-862	-	BC035354 NM_052841	-876	+	TSC_hg19_v1_chr1_-_32801835 AB528178 CU688192 AM393505 DQ893237 DQ896567 X70326 AL713653 AY007131 BC007904 BC066915 NM_023009	-26974	-	CR457252 TSC_hg19_v1_chr1_-_32860030 BC010573 CR749228 BX641056 AK300231 BC026322 AK297604 AK300306 AK001138 AK225717 AK293454 BC028381 AK021440 AK297352 AK225026 AK304477 AK316172 NM_001143888 NM_001143889 NM_001143890 NM_018045	31332	-	TSC_hg19_v1_chr1_+_32930659 AK092326 AX747483 NM_001145720	101947	+	NM_001040441	176066	+	NM_001167676|LOC100128071|100128071|uncharacterized LOC100128071##BC035354|TSSK3|81629|testis-specific serine kinase 3##NM_052841|TSSK3|81629|testis-specific serine kinase 3##AM393505|MARCKSL1|65108|MARCKS-like 1##DQ893237|MARCKSL1|65108|MARCKS-like 1##DQ896567|MARCKSL1|65108|MARCKS-like 1##X70326|MARCKSL1|65108|MARCKS-like 1##AL713653|MARCKSL1|65108|MARCKS-like 1##AY007131|MARCKSL1|65108|MARCKS-like 1##BC007904|MARCKSL1|65108|MARCKS-like 1##BC066915|MARCKSL1|65108|MARCKS-like 1##NM_023009|MARCKSL1|65108|MARCKS-like 1##CR457252|BSDC1|55108|BSD domain containing 1##BC010573|BSDC1|55108|BSD domain containing 1##CR749228|BSDC1|55108|BSD domain containing 1##BX641056|BSDC1|55108|BSD domain containing 1##AK300231|BSDC1|55108|BSD domain containing 1##BC026322|BSDC1|55108|BSD domain containing 1##AK297604|BSDC1|55108|BSD domain containing 1##AK300306|BSDC1|55108|BSD domain containing 1##AK001138|BSDC1|55108|BSD domain containing 1##AK225717|BSDC1|55108|BSD domain containing 1##AK293454|BSDC1|55108|BSD domain containing 1##BC028381|BSDC1|55108|BSD domain containing 1##AK021440|BSDC1|55108|BSD domain containing 1##AK297352|BSDC1|55108|BSD domain containing 1##AK225026|BSDC1|55108|BSD domain containing 1##AK304477|BSDC1|55108|BSD domain containing 1##AK316172|BSDC1|55108|BSD domain containing 1##NM_001143888|BSDC1|55108|BSD domain containing 1##NM_001143889|BSDC1|55108|BSD domain containing 1##NM_001143890|BSDC1|55108|BSD domain containing 1##NM_018045|BSDC1|55108|BSD domain containing 1##NM_001145720|ZBTB8B|728116|zinc finger and BTB domain containing 8B##NM_001040441|ZBTB8A|653121|zinc finger and BTB domain containing 8A	0.0	
chr14	64320955	64321038	reg1032930.p2	3.381	+	TSC_hg19_v1_chr14_+_64319731 NM_015180 NM_182914 AF435011 BC042134 BC071873 AF495911 AK095241	-1301	+	AJ293294 TSC_hg19_v1_chr14_-_64194774 AF349315 BC063839 NM_030791 AK314188 BC070060	-126247	-	TSC_hg19_v1_chr14_-_64108544 AF115513 AK095324 NM_080666	-212434	-	NM_182913 AY061758 AK297874	359881	+	NM_182910	361675	+	AF074599 AY438022 X99101 DQ777076 DQ777077 DQ838582 DQ838583 HQ692820 HQ692821 AF124790 NM_001214902 NM_001214903 AB006590	428667	-	NM_015180|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182914|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF435011|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC042134|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##BC071873|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF495911|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK095241|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AJ293294|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF349315|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC063839|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##NM_030791|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AK314188|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##BC070060|SGPP1|81537|sphingosine-1-phosphate phosphatase 1##AF115513|WDR89|112840|WD repeat domain 89##AK095324|WDR89|112840|WD repeat domain 89##NM_080666|WDR89|112840|WD repeat domain 89##NM_182913|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AY061758|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AK297874|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##NM_182910|SYNE2|23224|spectrin repeat containing, nuclear envelope 2##AF074599|ESR2|2100|estrogen receptor 2 (ER beta)##AY438022|ESR2|2100|estrogen receptor 2 (ER beta)##X99101|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777076|ESR2|2100|estrogen receptor 2 (ER beta)##DQ777077|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838582|ESR2|2100|estrogen receptor 2 (ER beta)##DQ838583|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692820|ESR2|2100|estrogen receptor 2 (ER beta)##HQ692821|ESR2|2100|estrogen receptor 2 (ER beta)##AF124790|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214902|ESR2|2100|estrogen receptor 2 (ER beta)##NM_001214903|ESR2|2100|estrogen receptor 2 (ER beta)##AB006590|ESR2|2100|estrogen receptor 2 (ER beta)	0.0	
chr19	17371563	17371711	reg1002386.p1	3.381	+	AB307712 AB463945 AK298764 HQ692851 TSC_hg19_v1_chr19_-_17356214 BC063018 BC084544 BC002669 NM_005234 AK314961	-15497	-	BC029361 TSC_hg19_v1_chr19_+_17337034 BC038945 AK026362 NM_024578 CU688632	-34603	+	TSC_hg19_v1_chr19_+_17326198 AK074683 BC006005 BC008455 AB590103 AM393803 CU675221 EU446821	-45432	+	AB026290 AB040046 AK300617 AK096028 BC027910 NM_031941 AK315239 AK292031	3910	-	TSC_hg19_v1_chr19_+_17378251 AK308590 AK299493 NM_001033549 NM_014173 AF161491 AK025970 AK301193 BC006244 AL136692 AK225047	6568	+	TSC_hg19_v1_chr19_+_17378266 AK000578 BC091491 BC000788	6657	+	AB307712|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AK298764|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##HQ692851|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC063018|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC084544|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC002669|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##NM_005234|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##AK314961|NR2F6|2063|nuclear receptor subfamily 2, group F, member 6##BC029361|OCEL1|79629|occludin/ELL domain containing 1##BC038945|OCEL1|79629|occludin/ELL domain containing 1##AK026362|OCEL1|79629|occludin/ELL domain containing 1##NM_024578|OCEL1|79629|occludin/ELL domain containing 1##AK074683|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC006005|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##BC008455|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AM393803|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##EU446821|USE1|55850|unconventional SNARE in the ER 1 homolog (S. cerevisiae)##AB026290|USHBP1|83878|Usher syndrome 1C binding protein 1##AB040046|USHBP1|83878|Usher syndrome 1C binding protein 1##AK300617|USHBP1|83878|Usher syndrome 1C binding protein 1##AK096028|USHBP1|83878|Usher syndrome 1C binding protein 1##BC027910|USHBP1|83878|Usher syndrome 1C binding protein 1##NM_031941|USHBP1|83878|Usher syndrome 1C binding protein 1##AK315239|USHBP1|83878|Usher syndrome 1C binding protein 1##AK292031|USHBP1|83878|Usher syndrome 1C binding protein 1##AK308590|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK299493|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_001033549|BABAM1|29086|BRISC and BRCA1 A complex member 1##NM_014173|BABAM1|29086|BRISC and BRCA1 A complex member 1##AF161491|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK025970|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK301193|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC006244|BABAM1|29086|BRISC and BRCA1 A complex member 1##AL136692|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK225047|BABAM1|29086|BRISC and BRCA1 A complex member 1##AK000578|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC091491|BABAM1|29086|BRISC and BRCA1 A complex member 1##BC000788|BABAM1|29086|BRISC and BRCA1 A complex member 1	0.0	
chr20	1986599	1986762	reg1015133.p1	3.381	+	AK316076 BC026334 AK295512 TSC_hg19_v1_chr20_-_1974732 AK308747 NM_001190898 NM_001190899 NM_024411	-11865	-	NM_001190900	-12287	-	AK289618 NM_001190892	-13229	-	GQ281297 NM_080836 AK314728	95921	+	BC140883 BC140884 TSC_hg19_v1_chr20_+_2083583 AB527968 AF195026 BC111573 BC017340 AK302629	96835	+	TSC_hg19_v1_chr20_-_2083527 BC034792	96846	-	AK316076|PDYN|5173|prodynorphin##BC026334|PDYN|5173|prodynorphin##NM_001190898|PDYN|5173|prodynorphin##NM_001190899|PDYN|5173|prodynorphin##NM_024411|PDYN|5173|prodynorphin##NM_001190900|PDYN|5173|prodynorphin##AK289618|PDYN|5173|prodynorphin##NM_001190892|PDYN|5173|prodynorphin##GQ281297|STK35|140901|serine/threonine kinase 35##NM_080836|STK35|140901|serine/threonine kinase 35##AK314728|STK35|140901|serine/threonine kinase 35##BC140883|STK35|140901|serine/threonine kinase 35##BC140884|STK35|140901|serine/threonine kinase 35##AF195026|STK35|140901|serine/threonine kinase 35##BC111573|STK35|140901|serine/threonine kinase 35##BC017340|STK35|140901|serine/threonine kinase 35##AK302629|STK35|140901|serine/threonine kinase 35	0.0	
chr3	134018566	134018675	reg1043640.p1	3.381	+	TSC_hg19_v1_chr3_-_133969650 NM_001005861 NM_002958 X69970 X96588	-48994	-	TSC_hg19_v1_chr3_-_133969397 AB527382	-49156	-	BC051347 TSC_hg19_v1_chr3_-_133748836 NM_005630	-269747	-	TSC_hg19_v1_chr3_-_134093290 AK223598 AK001343 AB023206 AK291616 NM_016201	74745	-	AK290761 TSC_hg19_v1_chr3_-_134204548	185910	-	TSC_hg19_v1_chr3_+_134204601 NM_001042383 NM_001042384 BC014050 AK023738	185974	+	NM_001005861|RYK|6259|RYK receptor-like tyrosine kinase##NM_002958|RYK|6259|RYK receptor-like tyrosine kinase##X69970|RYK|6259|RYK receptor-like tyrosine kinase##X96588|RYK|6259|RYK receptor-like tyrosine kinase##BC051347|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##NM_005630|SLCO2A1|6578|solute carrier organic anion transporter family, member 2A1##AK223598|AMOTL2|51421|angiomotin like 2##AK001343|AMOTL2|51421|angiomotin like 2##AB023206|AMOTL2|51421|angiomotin like 2##AK291616|AMOTL2|51421|angiomotin like 2##NM_016201|AMOTL2|51421|angiomotin like 2##AK290761|ANAPC13|25847|anaphase promoting complex subunit 13##NM_001042383|CEP63|80254|centrosomal protein 63kDa##NM_001042384|CEP63|80254|centrosomal protein 63kDa##BC014050|CEP63|80254|centrosomal protein 63kDa##AK023738|CEP63|80254|centrosomal protein 63kDa	0.028375	
chr3	19526276	19526401	reg1040368.p2	3.381	+	AK295633 AY053503 NM_144633 AB209053 AK309034	-336334	+	BC001744 NM_001131010	-1046105	-	TSC_hg19_v1_chr3_-_18466803 AK127242 NM_001195470 NM_002971	-1059541	-	BC028198 AK097644 NM_144715	449350	-	TSC_hg19_v1_chr3_+_19988586 NM_004162	462351	+	TSC_hg19_v1_chr3_+_19988870 AK312618 BC018288 AK309287 AK295992 BC001267	462563	+	AK295633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AY053503|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##NM_144633|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AB209053|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##AK309034|KCNH8|131096|potassium voltage-gated channel, subfamily H (eag-related), member 8##BC001744|SATB1|6304|SATB homeobox 1##NM_001131010|SATB1|6304|SATB homeobox 1##AK127242|SATB1|6304|SATB homeobox 1##NM_001195470|SATB1|6304|SATB homeobox 1##NM_002971|SATB1|6304|SATB homeobox 1##BC028198|EFHB|151651|EF-hand domain family, member B##AK097644|EFHB|151651|EF-hand domain family, member B##NM_144715|EFHB|151651|EF-hand domain family, member B##NM_004162|RAB5A|5868|RAB5A, member RAS oncogene family##AK312618|RAB5A|5868|RAB5A, member RAS oncogene family##BC018288|RAB5A|5868|RAB5A, member RAS oncogene family##AK309287|RAB5A|5868|RAB5A, member RAS oncogene family##AK295992|RAB5A|5868|RAB5A, member RAS oncogene family##BC001267|RAB5A|5868|RAB5A, member RAS oncogene family	0.0	
chr3	71730425	71730543	reg1040036.p1	3.381	+	TSC_hg19_v1_chr3_-_71632874 AK122710 NM_001244808 BC005055 BC054815 BC071893 BC080521 BC068481 NM_001012505 NM_001244810 NM_032682	-97506	-	AF250920 NM_001244816	-137777	-	TSC_hg19_v1_chr3_-_71542628 AF146696 BC054505	-187817	-	AK126999 TSC_hg19_v1_chr3_-_71774554 NM_001134651	44020	-	NM_001134650	47784	-	AB040799 HQ709187 NM_018971	72716	+	AK122710|FOXP1|27086|forkhead box P1##NM_001244808|FOXP1|27086|forkhead box P1##BC005055|FOXP1|27086|forkhead box P1##BC054815|FOXP1|27086|forkhead box P1##BC071893|FOXP1|27086|forkhead box P1##BC080521|FOXP1|27086|forkhead box P1##BC068481|FOXP1|27086|forkhead box P1##NM_001012505|FOXP1|27086|forkhead box P1##NM_001244810|FOXP1|27086|forkhead box P1##NM_032682|FOXP1|27086|forkhead box P1##AF250920|FOXP1|27086|forkhead box P1##NM_001244816|FOXP1|27086|forkhead box P1##AF146696|FOXP1|27086|forkhead box P1##BC054505|FOXP1|27086|forkhead box P1##AK126999|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134651|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##NM_001134650|EIF4E3|317649|eukaryotic translation initiation factor 4E family member 3##AB040799|GPR27|2850|G protein-coupled receptor 27##HQ709187|GPR27|2850|G protein-coupled receptor 27##NM_018971|GPR27|2850|G protein-coupled receptor 27	0.036731	
chrX	38513469	38513608	reg1019218.p1	3.381	+	TSC_hg19_v1_chrX_+_38420794 NM_004615 AB062057 L10373 BC018036 AK293534 AK293178 AK293552 AK312343 D10653 CU676142 DQ892093 DQ895571 D29808 AB102665	-92786	+	BC107153 BC107154 NM_000531 BC114496 AK292757 K02100 BC074745	-301714	+	TSC_hg19_v1_chrX_-_38186785 DQ426891 NM_000328 NM_001034853 DQ980617 AK291832	-326743	-	TSC_hg19_v1_chrX_+_38660678 NM_001098790 NM_001098791	147130	+	TSC_hg19_v1_chrX_+_38660711 BC019332	147168	+	BC008908 NM_021242	149534	+	NM_004615|TSPAN7|7102|tetraspanin 7##AB062057|TSPAN7|7102|tetraspanin 7##L10373|TSPAN7|7102|tetraspanin 7##BC018036|TSPAN7|7102|tetraspanin 7##AK293534|TSPAN7|7102|tetraspanin 7##AK293178|TSPAN7|7102|tetraspanin 7##AK293552|TSPAN7|7102|tetraspanin 7##AK312343|TSPAN7|7102|tetraspanin 7##D10653|TSPAN7|7102|tetraspanin 7##DQ892093|TSPAN7|7102|tetraspanin 7##DQ895571|TSPAN7|7102|tetraspanin 7##D29808|TSPAN7|7102|tetraspanin 7##AB102665|TSPAN7|7102|tetraspanin 7##BC107153|OTC|5009|ornithine carbamoyltransferase##BC107154|OTC|5009|ornithine carbamoyltransferase##NM_000531|OTC|5009|ornithine carbamoyltransferase##BC114496|OTC|5009|ornithine carbamoyltransferase##AK292757|OTC|5009|ornithine carbamoyltransferase##K02100|OTC|5009|ornithine carbamoyltransferase##BC074745|OTC|5009|ornithine carbamoyltransferase##DQ426891|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_000328|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001034853|RPGR|6103|retinitis pigmentosa GTPase regulator##AK291832|RPGR|6103|retinitis pigmentosa GTPase regulator##NM_001098790|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_001098791|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC019332|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##BC008908|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))##NM_021242|MID1IP1|58526|MID1 interacting protein 1 (gastrulation specific G12 homolog (zebrafish))	0.0	
chr1	16735479	16735562	reg1046254.p1	3.380	+	NM_001114600 NM_015609 BC023988 TSC_hg19_v1_chr1_+_16693726 BX640985 AJ295987 AB097042 AB097043 AB097046 AK297926 AK298576 AK308787 AL050028 AK316205 BC065538 AB097044 AB097045 BC010631	-41849	+	TSC_hg19_v1_chr1_-_16678969 BC063864 NM_018994 AK055598 BC043410	-56572	-	TSC_hg19_v1_chr1_-_16678922 AK310671	-56602	-	AK128106 BC022039 AK311614 AY327405 NM_198546	28382	-	NM_001145277 NM_001145278 NM_018090 TSC_hg19_v1_chr1_+_16767200	31664	+	AK223344 TSC_hg19_v1_chr1_+_16767218 AK300764 AK302227 AK023545 BC018914	31705	+	NM_001114600|C1orf144|26099|chromosome 1 open reading frame 144##NM_015609|C1orf144|26099|chromosome 1 open reading frame 144##BC023988|C1orf144|26099|chromosome 1 open reading frame 144##BX640985|C1orf144|26099|chromosome 1 open reading frame 144##AJ295987|C1orf144|26099|chromosome 1 open reading frame 144##AB097042|C1orf144|26099|chromosome 1 open reading frame 144##AB097043|C1orf144|26099|chromosome 1 open reading frame 144##AB097046|C1orf144|26099|chromosome 1 open reading frame 144##AK297926|C1orf144|26099|chromosome 1 open reading frame 144##AK298576|C1orf144|26099|chromosome 1 open reading frame 144##AK308787|C1orf144|26099|chromosome 1 open reading frame 144##AL050028|C1orf144|26099|chromosome 1 open reading frame 144##AK316205|C1orf144|26099|chromosome 1 open reading frame 144##BC065538|C1orf144|26099|chromosome 1 open reading frame 144##AB097044|C1orf144|26099|chromosome 1 open reading frame 144##AB097045|C1orf144|26099|chromosome 1 open reading frame 144##BC010631|C1orf144|26099|chromosome 1 open reading frame 144##BC063864|FBXO42|54455|F-box protein 42##NM_018994|FBXO42|54455|F-box protein 42##AK055598|FBXO42|54455|F-box protein 42##BC043410|FBXO42|54455|F-box protein 42##AK310671|FBXO42|54455|F-box protein 42##AK128106|SPATA21|374955|spermatogenesis associated 21##BC022039|SPATA21|374955|spermatogenesis associated 21##AK311614|SPATA21|374955|spermatogenesis associated 21##AY327405|SPATA21|374955|spermatogenesis associated 21##NM_198546|SPATA21|374955|spermatogenesis associated 21##NM_001145277|NECAP2|55707|NECAP endocytosis associated 2##NM_001145278|NECAP2|55707|NECAP endocytosis associated 2##NM_018090|NECAP2|55707|NECAP endocytosis associated 2##AK223344|NECAP2|55707|NECAP endocytosis associated 2##AK300764|NECAP2|55707|NECAP endocytosis associated 2##AK302227|NECAP2|55707|NECAP endocytosis associated 2##AK023545|NECAP2|55707|NECAP endocytosis associated 2##BC018914|NECAP2|55707|NECAP endocytosis associated 2	0.0	
chr16	57844304	57844387	reg1046606.p1	3.380	+	TSC_hg19_v1_chr16_-_57836404 AK307846 BC001211 AK304132 NM_001130100 NM_005550	-7936	-	TSC_hg19_v1_chr16_-_57836370 AB209290	-7974	-	BC041132 AK299431 AK291737 NM_001130099	-12544	-	U58837 NM_001135639 NM_001297 U18945	160670	-	AY363222 AY363223 NM_199046 NM_199456 BC104458 BC104459	165997	+	AB037809 NM_020807	189416	-	AK307846|KIFC3|3801|kinesin family member C3##BC001211|KIFC3|3801|kinesin family member C3##AK304132|KIFC3|3801|kinesin family member C3##NM_001130100|KIFC3|3801|kinesin family member C3##NM_005550|KIFC3|3801|kinesin family member C3##AB209290|KIFC3|3801|kinesin family member C3##BC041132|KIFC3|3801|kinesin family member C3##AK299431|KIFC3|3801|kinesin family member C3##AK291737|KIFC3|3801|kinesin family member C3##NM_001130099|KIFC3|3801|kinesin family member C3##U58837|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001135639|CNGB1|1258|cyclic nucleotide gated channel beta 1##NM_001297|CNGB1|1258|cyclic nucleotide gated channel beta 1##U18945|CNGB1|1258|cyclic nucleotide gated channel beta 1##AY363222|TEPP|374739|testis, prostate and placenta expressed##AY363223|TEPP|374739|testis, prostate and placenta expressed##NM_199046|TEPP|374739|testis, prostate and placenta expressed##NM_199456|TEPP|374739|testis, prostate and placenta expressed##BC104458|TEPP|374739|testis, prostate and placenta expressed##BC104459|TEPP|374739|testis, prostate and placenta expressed##AB037809|ZNF319|57567|zinc finger protein 319##NM_020807|ZNF319|57567|zinc finger protein 319	0.0	
chr16	81538908	81539048	reg1045008.p1	3.380	+	AY172689 NM_030629	-10025	+	NM_198390 TSC_hg19_v1_chr16_+_81478778 AK096598 AB462985 AB051481	-60145	+	BC044840 TSC_hg19_v1_chr16_+_81348606 HQ257897	-190328	+	TSC_hg19_v1_chr16_+_81812898 NM_002661	273919	+	TSC_hg19_v1_chr16_+_81812901 AB208914	273924	+	TSC_hg19_v1_chr16_+_81812926 BC007565 BC011772 BC014561 BC018646 M37238 X14034	273952	+	AY172689|CMIP|80790|c-Maf inducing protein##NM_030629|CMIP|80790|c-Maf inducing protein##NM_198390|CMIP|80790|c-Maf inducing protein##AK096598|CMIP|80790|c-Maf inducing protein##AB051481|CMIP|80790|c-Maf inducing protein##BC044840|GAN|8139|gigaxonin##HQ257897|GAN|8139|gigaxonin##NM_002661|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##AB208914|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC007565|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC011772|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC014561|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##BC018646|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##M37238|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)##X14034|PLCG2|5336|phospholipase C, gamma 2 (phosphatidylinositol-specific)	0.0	
chr17	47302493	47302632	reg1037413.p2	3.380	+	TSC_hg19_v1_chr17_+_47288070 BC007780 AB463387 AM392779 AM392922 DQ893090 DQ896362	-14485	+	NM_001198754	-14627	-	AB037886 NM_001135186 NM_016428	-14974	+	BC029931 AJ457189 NM_001143804 NM_178500 TSC_hg19_v1_chr17_-_47308163	5581	-	CR933680 TSC_hg19_v1_chr17_-_47439487 BC034987 AK292667 NM_001145365 AB023141 BC152440 NM_014897	137018	-	BC095460 TSC_hg19_v1_chr17_-_47492215	189653	-	BC007780|ABI3|51225|ABI family, member 3##AM392779|ABI3|51225|ABI family, member 3##AM392922|ABI3|51225|ABI family, member 3##DQ893090|ABI3|51225|ABI family, member 3##DQ896362|ABI3|51225|ABI family, member 3##NM_001198754|GNGT2|2793|guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2##AB037886|ABI3|51225|ABI family, member 3##NM_001135186|ABI3|51225|ABI family, member 3##NM_016428|ABI3|51225|ABI family, member 3##BC029931|PHOSPHO1|162466|phosphatase, orphan 1##AJ457189|PHOSPHO1|162466|phosphatase, orphan 1##NM_001143804|PHOSPHO1|162466|phosphatase, orphan 1##NM_178500|PHOSPHO1|162466|phosphatase, orphan 1##CR933680|ZNF652|22834|zinc finger protein 652##BC034987|ZNF652|22834|zinc finger protein 652##AK292667|ZNF652|22834|zinc finger protein 652##NM_001145365|ZNF652|22834|zinc finger protein 652##AB023141|ZNF652|22834|zinc finger protein 652##BC152440|ZNF652|22834|zinc finger protein 652##NM_014897|ZNF652|22834|zinc finger protein 652##BC095460|PHB|5245|prohibitin	0.0	
chr20	44575601	44575667	reg1030155.p2	3.380	+	TSC_hg19_v1_chr20_-_44563695 AK097925	-11940	-	TSC_hg19_v1_chr20_-_44563589 BC133006 BC133008	-12033	-	TSC_hg19_v1_chr20_+_44563323 NM_022104 AK299435 AB050014 AK056553 BC010005 BC013365	-12288	+	TSC_hg19_v1_chr20_-_44600828 AF395833 BC041331 BC142981 NM_022095	25176	-	TSC_hg19_v1_chr20_-_44600992 AK296989	25359	-	TSC_hg19_v1_chr20_+_44637546 AK298246 AK301446 AK311648 AK313137 AK316145 J05070 NM_004994 AK303080 BC006093 DQ896791 EU176415 AB528343 CU675241	61918	+	AK097925|FLJ40606|643549|uncharacterized LOC643549##BC133006|FLJ40606|643549|uncharacterized LOC643549##BC133008|FLJ40606|643549|uncharacterized LOC643549##NM_022104|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AK299435|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AB050014|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AK056553|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##BC010005|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##BC013365|PCIF1|63935|PDX1 C-terminal inhibiting factor 1##AF395833|ZNF335|63925|zinc finger protein 335##BC041331|ZNF335|63925|zinc finger protein 335##BC142981|ZNF335|63925|zinc finger protein 335##NM_022095|ZNF335|63925|zinc finger protein 335##AK296989|ZNF335|63925|zinc finger protein 335##AK298246|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK301446|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK313137|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK316145|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##J05070|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##NM_004994|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##AK303080|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##BC006093|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##DQ896791|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)##EU176415|MMP9|4318|matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase)	0.0	
chr20	45526938	45527021	reg1039261.p2	3.380	+	TSC_hg19_v1_chr20_+_45523523 AK293032 AF455147	-3427	+	TSC_hg19_v1_chr20_+_45523505 BC008803	-3471	+	TSC_hg19_v1_chr20_+_45523254 BC013882 NM_005244 NM_172110	-3697	+	TSC_hg19_v1_chr20_-_45927496 BC030721	400590	-	TSC_hg19_v1_chr20_-_45976626 DQ082998 DQ082999 DQ368669 DQ368670 DQ368671 DQ368672 DQ368673 DQ368674 DQ368675 DQ368676 DQ368677 DQ368678 DQ368679 DQ368680	449668	-	TSC_hg19_v1_chr20_-_45985442 AK225857 AF454056 AK294511 AK299899 AK000275 BC136608 BC144289 BC092432 BC146802 NM_012408 NM_183047 NM_183048 BX641005	458509	-	AK293032|EYA2|2139|eyes absent homolog 2 (Drosophila)##AF455147|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC008803|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC013882|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_005244|EYA2|2139|eyes absent homolog 2 (Drosophila)##NM_172110|EYA2|2139|eyes absent homolog 2 (Drosophila)##BC030721|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082998|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ082999|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368669|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368670|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368671|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368672|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368673|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368674|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368675|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368676|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368677|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368678|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368679|ZMYND8|23613|zinc finger, MYND-type containing 8##DQ368680|ZMYND8|23613|zinc finger, MYND-type containing 8##AK225857|ZMYND8|23613|zinc finger, MYND-type containing 8##AF454056|ZMYND8|23613|zinc finger, MYND-type containing 8##AK294511|ZMYND8|23613|zinc finger, MYND-type containing 8##AK299899|ZMYND8|23613|zinc finger, MYND-type containing 8##AK000275|ZMYND8|23613|zinc finger, MYND-type containing 8##BC136608|ZMYND8|23613|zinc finger, MYND-type containing 8##BC144289|ZMYND8|23613|zinc finger, MYND-type containing 8##BC092432|ZMYND8|23613|zinc finger, MYND-type containing 8##BC146802|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_012408|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183047|ZMYND8|23613|zinc finger, MYND-type containing 8##NM_183048|ZMYND8|23613|zinc finger, MYND-type containing 8##BX641005|ZMYND8|23613|zinc finger, MYND-type containing 8	0.0	
chr4	10585790	10585922	reg1036934.p2	3.380	+	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-126846	-	TSC_hg19_v1_chr4_-_10118515 NM_005112 NM_017491	-467320	-	TSC_hg19_v1_chr4_-_10118493 AK222897 AB010427	-467378	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	100545	-	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	844676	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2900095	-	BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##NM_005112|WDR1|9948|WD repeat domain 1##NM_017491|WDR1|9948|WD repeat domain 1##AK222897|WDR1|9948|WD repeat domain 1##AB010427|WDR1|9948|WD repeat domain 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family	0.0	
chr4	3248422	3248519	reg1029541.p2	3.380	+	L12392 TSC_hg19_v1_chr4_+_3076416 AB016794 NM_002111	-172143	+	TSC_hg19_v1_chr4_+_2965297 AK292390 AK223581 NM_001004056 NM_001004057 NM_182982 BC110825 BC027597 BC039732 BC117320 U33054 U33055 U33056 AK293569 X97879 X97880 X97881 X98118 HQ258463 X75897	-282935	+	TSC_hg19_v1_chr4_-_2965155 AK292939	-283276	-	AK126094 NM_001042690	2296	+	TSC_hg19_v1_chr4_+_3294763 AK310999 BC028154	46290	+	AF030111 NM_002926 NM_198229	67403	+	L12392|HTT|3064|huntingtin##AB016794|HTT|3064|huntingtin##NM_002111|HTT|3064|huntingtin##AK292390|GRK4|2868|G protein-coupled receptor kinase 4##AK223581|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004056|GRK4|2868|G protein-coupled receptor kinase 4##NM_001004057|GRK4|2868|G protein-coupled receptor kinase 4##NM_182982|GRK4|2868|G protein-coupled receptor kinase 4##BC027597|GRK4|2868|G protein-coupled receptor kinase 4##BC117320|GRK4|2868|G protein-coupled receptor kinase 4##U33054|GRK4|2868|G protein-coupled receptor kinase 4##U33055|GRK4|2868|G protein-coupled receptor kinase 4##U33056|GRK4|2868|G protein-coupled receptor kinase 4##X97879|GRK4|2868|G protein-coupled receptor kinase 4##X97880|GRK4|2868|G protein-coupled receptor kinase 4##X97881|GRK4|2868|G protein-coupled receptor kinase 4##X98118|GRK4|2868|G protein-coupled receptor kinase 4##HQ258463|GRK4|2868|G protein-coupled receptor kinase 4##X75897|GRK4|2868|G protein-coupled receptor kinase 4##AK292939|NOP14|8602|NOP14 nucleolar protein homolog (yeast)##AK126094|C4orf44|345222|chromosome 4 open reading frame 44##NM_001042690|C4orf44|345222|chromosome 4 open reading frame 44##AK310999|RGS12|6002|regulator of G-protein signaling 12##BC028154|RGS12|6002|regulator of G-protein signaling 12##AF030111|RGS12|6002|regulator of G-protein signaling 12##NM_002926|RGS12|6002|regulator of G-protein signaling 12##NM_198229|RGS12|6002|regulator of G-protein signaling 12	0.948913	CTCF.p2:5:0.924
chr5	93953901	93953967	reg1037893.p1	3.380	+	TSC_hg19_v1_chr5_-_93447341 AL136630 AK312930 AK295879 AK296683 AK296986 AK295127 NM_001163417 NM_001163418 NM_032042	-506614	-	CU688688 EU446850 BC029532 AB527965 AK098546 NM_153216	-876682	-	AK309742 TSC_hg19_v1_chr5_-_92957232	-996723	-	TSC_hg19_v1_chr5_-_93954299 BX648338 BC035515 AK308195 NM_001145678 NM_173665	323	-	BC070332 AK299080 AK297452 CR936768 AL050298 NM_032290 BC054885 BC107571	439	+	AK025997 TSC_hg19_v1_chr5_-_94224607	270672	-	AL136630|FAM172A|83989|family with sequence similarity 172, member A##AK312930|FAM172A|83989|family with sequence similarity 172, member A##AK295879|FAM172A|83989|family with sequence similarity 172, member A##AK296683|FAM172A|83989|family with sequence similarity 172, member A##AK296986|FAM172A|83989|family with sequence similarity 172, member A##AK295127|FAM172A|83989|family with sequence similarity 172, member A##NM_001163417|FAM172A|83989|family with sequence similarity 172, member A##NM_001163418|FAM172A|83989|family with sequence similarity 172, member A##NM_032042|FAM172A|83989|family with sequence similarity 172, member A##EU446850|POU5F2|134187|POU domain class 5, transcription factor 2##BC029532|POU5F2|134187|POU domain class 5, transcription factor 2##AK098546|POU5F2|134187|POU domain class 5, transcription factor 2##NM_153216|POU5F2|134187|POU domain class 5, transcription factor 2##BX648338|KIAA0825|285600|KIAA0825##BC035515|KIAA0825|285600|KIAA0825##AK308195|KIAA0825|285600|KIAA0825##NM_001145678|KIAA0825|285600|KIAA0825##NM_173665|KIAA0825|285600|KIAA0825##BC070332|ANKRD32|84250|ankyrin repeat domain 32##AK299080|ANKRD32|84250|ankyrin repeat domain 32##AK297452|ANKRD32|84250|ankyrin repeat domain 32##CR936768|ANKRD32|84250|ankyrin repeat domain 32##AL050298|ANKRD32|84250|ankyrin repeat domain 32##NM_032290|ANKRD32|84250|ankyrin repeat domain 32##BC054885|ANKRD32|84250|ankyrin repeat domain 32##BC107571|ANKRD32|84250|ankyrin repeat domain 32##AK025997|MCTP1|79772|multiple C2 domains, transmembrane 1	0.0	
chr6_qbl_hap6	2174834	2174935	reg1036460.p1	3.380	+	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	None	0.0	
chr8	71314556	71314623	reg1035187.p1	3.380	+	TSC_hg19_v1_chr8_-_70983549 AF319458 AK022595 NM_024504	-331034	-	TSC_hg19_v1_chr8_-_70983468 BC052311	-331118	-	AK308488 AF205075 AK096879 NM_030958	-567340	-	BC092442 TSC_hg19_v1_chr8_-_71315599	958	-	TSC_hg19_v1_chr8_-_71316041 NM_006540 X97674 AK308426	1437	-	BT007359 CR541654 CR541739 DQ892688 DQ895932 TSC_hg19_v1_chr8_-_71520586 AK292777 BC020283 BC000687 AK289397 X63679 BC037738	205933	-	AF319458|PRDM14|63978|PR domain containing 14##AK022595|PRDM14|63978|PR domain containing 14##NM_024504|PRDM14|63978|PR domain containing 14##BC052311|PRDM14|63978|PR domain containing 14##AK308488|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AF205075|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##AK096879|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##NM_030958|SLCO5A1|81796|solute carrier organic anion transporter family, member 5A1##BC092442|NCOA2|10499|nuclear receptor coactivator 2##NM_006540|NCOA2|10499|nuclear receptor coactivator 2##X97674|NCOA2|10499|nuclear receptor coactivator 2##AK308426|NCOA2|10499|nuclear receptor coactivator 2##BT007359|TRAM1|23471|translocation associated membrane protein 1##CR541654|TRAM1|23471|translocation associated membrane protein 1##CR541739|TRAM1|23471|translocation associated membrane protein 1##DQ892688|TRAM1|23471|translocation associated membrane protein 1##DQ895932|TRAM1|23471|translocation associated membrane protein 1##AK292777|TRAM1|23471|translocation associated membrane protein 1##BC020283|TRAM1|23471|translocation associated membrane protein 1##BC000687|TRAM1|23471|translocation associated membrane protein 1##AK289397|TRAM1|23471|translocation associated membrane protein 1##X63679|TRAM1|23471|translocation associated membrane protein 1##BC037738|TRAM1|23471|translocation associated membrane protein 1	0.666049	CTCF.p2:100:0.666
chr9	136060496	136060599	reg1036265.p1	3.380	+	AY358175 BC032499 AK074639 AK074944 AK291498 AK293997 AK303825 AK307687 AK314097 NM_021996 TSC_hg19_v1_chr9_-_136039302	-21250	-	AF027169 TSC_hg19_v1_chr9_-_136024565 NM_001042368	-35861	-	TSC_hg19_v1_chr9_-_135996628 AK074114 GQ129265 GQ129266 AF295773 NM_006266 BC059362	-64048	-	BC096717 BC098125 BC098151 BC098340 AJ251026 AJ251027 AJ251028 NM_014581 AY358981	24073	-	AF134412 AF134413 AF134414 AF134415 AF134416 BC069595 BC069605 BC069814 BC111575 DQ139865 FR691751 FR691752 J05175 JN791441 CU686922 AK302203 TSC_hg19_v1_chr9_-_136150618	90067	-	NM_020469 TSC_hg19_v1_chr9_-_136150638	90090	-	AY358175|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##BC032499|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074639|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK074944|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK291498|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK293997|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK303825|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK307687|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AK314097|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##NM_021996|GBGT1|26301|globoside alpha-1,3-N-acetylgalactosaminyltransferase 1##AF027169|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_001042368|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AK074114|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129265|RALGDS|5900|ral guanine nucleotide dissociation stimulator##GQ129266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##AF295773|RALGDS|5900|ral guanine nucleotide dissociation stimulator##NM_006266|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC059362|RALGDS|5900|ral guanine nucleotide dissociation stimulator##BC096717|OBP2B|29989|odorant binding protein 2B##BC098125|OBP2B|29989|odorant binding protein 2B##BC098151|OBP2B|29989|odorant binding protein 2B##BC098340|OBP2B|29989|odorant binding protein 2B##AJ251026|OBP2B|29989|odorant binding protein 2B##AJ251027|OBP2B|29989|odorant binding protein 2B##AJ251028|OBP2B|29989|odorant binding protein 2B##NM_014581|OBP2B|29989|odorant binding protein 2B##AY358981|OBP2B|29989|odorant binding protein 2B##AF134412|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134413|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134414|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134415|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AF134416|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069595|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069605|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC069814|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##BC111575|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##DQ139865|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691751|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##FR691752|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##J05175|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##JN791441|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##AK302203|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)##NM_020469|ABO|28|ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase)	0.222312	CTCF.p2:10:0.222
chr11	14328171	14328281	reg1042094.p1	3.379	+	TSC_hg19_v1_chr11_+_13984277 NM_006108 AK291780 AK074803 BC136513 BC136563 BC006262 AB051390	-343943	+	AY423606 BC017377 TSC_hg19_v1_chr11_+_13690267 AY600449	-637959	+	TSC_hg19_v1_chr11_+_13690255 AK315527 AK026381	-637973	+	AK309550 AK309683 NM_001177315 NM_001102669	51825	-	TSC_hg19_v1_chr11_-_14380730 BC013106 AK299606 AK313976 NM_012250	52451	-	AK300103 NM_001177314	57825	-	NM_006108|SPON1|10418|spondin 1, extracellular matrix protein##AK291780|SPON1|10418|spondin 1, extracellular matrix protein##AK074803|SPON1|10418|spondin 1, extracellular matrix protein##BC136513|SPON1|10418|spondin 1, extracellular matrix protein##BC136563|SPON1|10418|spondin 1, extracellular matrix protein##AB051390|SPON1|10418|spondin 1, extracellular matrix protein##AY423606|FAR1|84188|fatty acyl CoA reductase 1##BC017377|FAR1|84188|fatty acyl CoA reductase 1##AY600449|FAR1|84188|fatty acyl CoA reductase 1##AK315527|FAR1|84188|fatty acyl CoA reductase 1##AK026381|FAR1|84188|fatty acyl CoA reductase 1##AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##BC013106|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK299606|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK313976|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_012250|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	0.254312	CTCF.p2:-13:0.254
chr11	696562	696659	reg1034713.p2	3.379	+	NM_001042463 NM_174940 BC008671 TSC_hg19_v1_chr11_+_695815 AK302585 AK124309	-888	+	AF049460 AK291383 TSC_hg19_v1_chr11_-_695598 NM_021008	-1040	-	BC042135 BC053322 FJ985253 TSC_hg19_v1_chr11_-_695223	-1400	-	TSC_hg19_v1_chr11_+_706230 NM_022772 AK025588 AK025824 AK225311 AK294041 AK222903	9559	+	TSC_hg19_v1_chr11_+_706613 BC080636	10015	+	AK027765 TSC_hg19_v1_chr11_+_722322	25692	+	NM_001042463|TMEM80|283232|transmembrane protein 80##NM_174940|TMEM80|283232|transmembrane protein 80##BC008671|TMEM80|283232|transmembrane protein 80##AK302585|TMEM80|283232|transmembrane protein 80##AK124309|TMEM80|283232|transmembrane protein 80##AF049460|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##AK291383|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##NM_021008|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##BC042135|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##BC053322|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##FJ985253|DEAF1|10522|deformed epidermal autoregulatory factor 1 (Drosophila)##NM_022772|EPS8L2|64787|EPS8-like 2##AK025588|EPS8L2|64787|EPS8-like 2##AK025824|EPS8L2|64787|EPS8-like 2##AK225311|EPS8L2|64787|EPS8-like 2##AK294041|EPS8L2|64787|EPS8-like 2##AK222903|EPS8L2|64787|EPS8-like 2##BC080636|EPS8L2|64787|EPS8-like 2##AK027765|EPS8L2|64787|EPS8-like 2	0.015356	
chr12	68041837	68041979	reg1027023.p2	3.379	+	BC050341 TSC_hg19_v1_chr12_+_67663413 AB384533 EU832277 EU832362	-378478	+	TSC_hg19_v1_chr12_+_67663165 AL136810 AK096010 AB020636 AK314358	-378736	+	NM_018448 TSC_hg19_v1_chr12_+_67663121 AK292456	-378806	+	TSC_hg19_v1_chr12_+_68042500 AK313937 NM_003583 NM_006482 BC005809 BC006375 Y13493	715	+	X62468 X62469 X62470 X62471 X62472 X62473 X62474 AF506749 AY044154 AY255839 X87308 AB451324 AB451453 AB590804 AY255837 AM903379 V00543 X13274 NM_000619 X01992 BC070256	511514	-	CU688126 CU688128 BC066270 BC066271 AJ251549 NM_018402	577644	-	BC050341|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832277|CAND1|55832|cullin-associated and neddylation-dissociated 1##EU832362|CAND1|55832|cullin-associated and neddylation-dissociated 1##AL136810|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK096010|CAND1|55832|cullin-associated and neddylation-dissociated 1##AB020636|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK314358|CAND1|55832|cullin-associated and neddylation-dissociated 1##NM_018448|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK292456|CAND1|55832|cullin-associated and neddylation-dissociated 1##AK313937|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_003583|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##NM_006482|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC005809|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##BC006375|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##Y13493|DYRK2|8445|dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2##X62468|IFNG|3458|interferon, gamma##X62469|IFNG|3458|interferon, gamma##X62470|IFNG|3458|interferon, gamma##X62471|IFNG|3458|interferon, gamma##X62472|IFNG|3458|interferon, gamma##X62473|IFNG|3458|interferon, gamma##X62474|IFNG|3458|interferon, gamma##AF506749|IFNG|3458|interferon, gamma##AY044154|IFNG|3458|interferon, gamma##AY255839|IFNG|3458|interferon, gamma##X87308|IFNG|3458|interferon, gamma##AB451324|IFNG|3458|interferon, gamma##AB451453|IFNG|3458|interferon, gamma##AY255837|IFNG|3458|interferon, gamma##AM903379|IFNG|3458|interferon, gamma##V00543|IFNG|3458|interferon, gamma##X13274|IFNG|3458|interferon, gamma##NM_000619|IFNG|3458|interferon, gamma##X01992|IFNG|3458|interferon, gamma##BC070256|IFNG|3458|interferon, gamma##BC066270|IL26|55801|interleukin 26##BC066271|IL26|55801|interleukin 26##AJ251549|IL26|55801|interleukin 26##NM_018402|IL26|55801|interleukin 26	0.08771	
chr19	1123101	1123227	reg1037345.p1	3.379	+	TSC_hg19_v1_chr19_-_1111972 BC106021	-11177	-	TSC_hg19_v1_chr19_+_1104646 NM_001039848	-18527	+	TSC_hg19_v1_chr19_+_1104068 BC010157	-19072	+	TSC_hg19_v1_chr19_-_1132221 AK125139 AK296849 AK309167 NM_001100122	9085	-	TSC_hg19_v1_chr19_-_1174256 BC052799	51064	-	TSC_hg19_v1_chr19_-_1174260 AB023180	51095	-	BC106021|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##NM_001039848|GPX4|2879|glutathione peroxidase 4 (phospholipid hydroperoxidase)##BC010157|GPX4|2879|glutathione peroxidase 4 (phospholipid hydroperoxidase)##AK125139|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##AK296849|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##AK309167|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##NM_001100122|SBNO2|22904|strawberry notch homolog 2 (Drosophila)##AB023180|SBNO2|22904|strawberry notch homolog 2 (Drosophila)	0.0	
chr1	94311536	94311716	reg1029443.p1	3.379	+	U92715 TSC_hg19_v1_chr1_-_94147394 BC039895 AF124250 NM_003567	-164299	-	TSC_hg19_v1_chr1_+_94057602 BC084562	-254019	+	TSC_hg19_v1_chr1_+_94057524 AK307291	-254086	+	TSC_hg19_v1_chr1_-_94344731 HQ258657 AK302909 AY394925 U15552 BC063040 BC047688	33088	-	AK222722 AK292379 AK308808 TSC_hg19_v1_chr1_-_94344763 BC001784 BC130622 AB046574 BC020634 AY336729 NM_014597	33122	-	TSC_hg19_v1_chr1_-_94374956 BC041809 L35546	63336	-	U92715|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC039895|BCAR3|8412|breast cancer anti-estrogen resistance 3##AF124250|BCAR3|8412|breast cancer anti-estrogen resistance 3##NM_003567|BCAR3|8412|breast cancer anti-estrogen resistance 3##BC084562|LOC100129046|100129046|uncharacterized LOC100129046##AK307291|LOC100129046|100129046|uncharacterized LOC100129046##HQ258657|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK302909|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY394925|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##U15552|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC063040|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC047688|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK222722|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK292379|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AK308808|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC001784|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC130622|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AB046574|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC020634|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##AY336729|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##NM_014597|DNTTIP2|30836|deoxynucleotidyltransferase, terminal, interacting protein 2##BC041809|GCLM|2730|glutamate-cysteine ligase, modifier subunit##L35546|GCLM|2730|glutamate-cysteine ligase, modifier subunit	0.0	
chr20	4881986	4882071	reg1041129.p1	3.379	+	CR627436 TSC_hg19_v1_chr20_-_4804255 AK291458 AK222650 AY154470 D79990 NM_014737	-77834	-	AY154472 NM_170774	-86260	-	AK313404 TSC_hg19_v1_chr20_+_4702555 BC043644 NM_012409 AF187843 AY358985	-179494	+	TSC_hg19_v1_chr20_-_4982149 D87075 NM_005116 DQ011866 AK296304 AK297253	100132	-	BC013112 AF164142 NM_203327	108897	-	TSC_hg19_v1_chr20_-_5093685 AY359115 BC015113 AK055700 BC110408 BC011990 BC009768 BC009770 AF161392 BC009769 AK315606 BC066317 AK309823 BC070212 NM_001009923 NM_001009924 NM_001009925 NM_014145	211587	-	CR627436|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK291458|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK222650|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154470|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##D79990|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_014737|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AY154472|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##NM_170774|RASSF2|9770|Ras association (RalGDS/AF-6) domain family member 2##AK313404|PRND|23627|prion protein 2 (dublet)##BC043644|PRND|23627|prion protein 2 (dublet)##NM_012409|PRND|23627|prion protein 2 (dublet)##AF187843|PRND|23627|prion protein 2 (dublet)##AY358985|PRND|23627|prion protein 2 (dublet)##D87075|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_005116|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##DQ011866|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK296304|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AK297253|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##BC013112|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AF164142|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##NM_203327|SLC23A2|9962|solute carrier family 23 (nucleobase transporters), member 2##AY359115|C20orf30|29058|chromosome 20 open reading frame 30##BC015113|C20orf30|29058|chromosome 20 open reading frame 30##AK055700|C20orf30|29058|chromosome 20 open reading frame 30##BC110408|C20orf30|29058|chromosome 20 open reading frame 30##BC011990|C20orf30|29058|chromosome 20 open reading frame 30##BC009768|C20orf30|29058|chromosome 20 open reading frame 30##BC009770|C20orf30|29058|chromosome 20 open reading frame 30##AF161392|C20orf30|29058|chromosome 20 open reading frame 30##BC009769|C20orf30|29058|chromosome 20 open reading frame 30##AK315606|C20orf30|29058|chromosome 20 open reading frame 30##BC066317|C20orf30|29058|chromosome 20 open reading frame 30##AK309823|C20orf30|29058|chromosome 20 open reading frame 30##BC070212|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009923|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009924|C20orf30|29058|chromosome 20 open reading frame 30##NM_001009925|C20orf30|29058|chromosome 20 open reading frame 30##NM_014145|C20orf30|29058|chromosome 20 open reading frame 30	0.013835	
chr21	42739897	42740029	reg1038341.p1	3.379	+	TSC_hg19_v1_chr21_+_42733956 M30818 NM_002463 AK308060 AK126107	-6025	+	AK125528 NM_058186 NM_206964 TSC_hg19_v1_chr21_+_42688738 BC057829 AF375989 AJ409094 AY040086 AY358459 HQ257913 AF494379	-51230	+	AK302095 BC036314 TSC_hg19_v1_chr21_+_42676236	-63757	+	TSC_hg19_v1_chr21_+_42742025 AK298780	2056	+	AK096355 NM_001144925	52517	+	NM_002462 TSC_hg19_v1_chr21_+_42798165 AK225885 AK315465 NM_001178046 M33882 BC052255	58131	+	M30818|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##NM_002463|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK308060|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK126107|LOC100131190|100131190|uncharacterized LOC100131190##AK125528|FAM3B|54097|family with sequence similarity 3, member B##NM_058186|FAM3B|54097|family with sequence similarity 3, member B##NM_206964|FAM3B|54097|family with sequence similarity 3, member B##BC057829|FAM3B|54097|family with sequence similarity 3, member B##AF375989|FAM3B|54097|family with sequence similarity 3, member B##AJ409094|FAM3B|54097|family with sequence similarity 3, member B##AY040086|FAM3B|54097|family with sequence similarity 3, member B##AY358459|FAM3B|54097|family with sequence similarity 3, member B##HQ257913|FAM3B|54097|family with sequence similarity 3, member B##AF494379|FAM3B|54097|family with sequence similarity 3, member B##BC036314|FAM3B|54097|family with sequence similarity 3, member B##AK298780|MX2|4600|myxovirus (influenza virus) resistance 2 (mouse)##AK096355|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001144925|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_002462|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK225885|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##AK315465|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##NM_001178046|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##M33882|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)##BC052255|MX1|4599|myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)	0.0	
chr2	62526969	62527086	reg1034933.p1	3.379	+	TSC_hg19_v1_chr2_+_62423260 AB049584 BC047933 NM_006577 AF092051 AF288208	-103761	+	TSC_hg19_v1_chr2_+_62132808 AK223607 AB178811 NM_152516 AK294203 BC022046 CU692476 AB590636 BC009266 D85433	-394198	+	TSC_hg19_v1_chr2_-_62115750 AK312586 AK315975 AK307856 AK290538 BC093446 AK308942 AK303082 NM_006430	-411241	-	BC047439 AK091902 AX747245 NM_198276	206512	-	AK292545 NM_001142615	373958	+	TSC_hg19_v1_chr2_+_62932868 AK310828 AK000828 NM_001142616 NM_015252 AL833968 BC067215	405939	+	AB049584|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##BC047933|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##NM_006577|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF092051|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AF288208|B3GNT2|10678|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2##AK223607|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AB178811|COMMD1|150684|copper metabolism (Murr1) domain containing 1##NM_152516|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK294203|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC022046|COMMD1|150684|copper metabolism (Murr1) domain containing 1##BC009266|COMMD1|150684|copper metabolism (Murr1) domain containing 1##D85433|COMMD1|150684|copper metabolism (Murr1) domain containing 1##AK312586|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK315975|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK307856|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK290538|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK308942|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##AK303082|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##NM_006430|CCT4|10575|chaperonin containing TCP1, subunit 4 (delta)##BC047439|TMEM17|200728|transmembrane protein 17##AK091902|TMEM17|200728|transmembrane protein 17##NM_198276|TMEM17|200728|transmembrane protein 17##AK292545|EHBP1|23301|EH domain binding protein 1##NM_001142615|EHBP1|23301|EH domain binding protein 1##AK310828|EHBP1|23301|EH domain binding protein 1##AK000828|EHBP1|23301|EH domain binding protein 1##NM_001142616|EHBP1|23301|EH domain binding protein 1##NM_015252|EHBP1|23301|EH domain binding protein 1##AL833968|EHBP1|23301|EH domain binding protein 1##BC067215|EHBP1|23301|EH domain binding protein 1	0.0	
chr5	79551314	79551407	reg1036513.p2	3.379	+	BC050456 TSC_hg19_v1_chr5_+_79331170 NM_003248 AK313587 Z19585	-220196	+	TSC_hg19_v1_chr5_-_79287069 AK091375 AX746944 BX538064 BC150295 AK296864 BX647596 NM_001010891 NM_001167741	-264402	-	TSC_hg19_v1_chr5_+_78985662 BC020856 NM_153610 AL832376	-565688	+	BC101280 BC101281 BC101282 BC101283 TSC_hg19_v1_chr5_-_79551866 AF498273 AK297467 NM_001174071 NM_001174072 NM_178276	525	-	NM_032567 AK098575 AK314007 AF333098 BC033798	64455	+	TSC_hg19_v1_chr5_+_79703879 NM_001105251 NM_014733 BC032227 BX537424 CR933621 AB002303 BC030808	152493	+	BC050456|THBS4|7060|thrombospondin 4##NM_003248|THBS4|7060|thrombospondin 4##AK313587|THBS4|7060|thrombospondin 4##Z19585|THBS4|7060|thrombospondin 4##AK091375|MTX3|345778|metaxin 3##BX538064|MTX3|345778|metaxin 3##BC150295|MTX3|345778|metaxin 3##AK296864|MTX3|345778|metaxin 3##BX647596|MTX3|345778|metaxin 3##NM_001010891|MTX3|345778|metaxin 3##NM_001167741|MTX3|345778|metaxin 3##BC020856|CMYA5|202333|cardiomyopathy associated 5##NM_153610|CMYA5|202333|cardiomyopathy associated 5##AL832376|CMYA5|202333|cardiomyopathy associated 5##BC101280|SERINC5|256987|serine incorporator 5##BC101281|SERINC5|256987|serine incorporator 5##BC101282|SERINC5|256987|serine incorporator 5##BC101283|SERINC5|256987|serine incorporator 5##AF498273|SERINC5|256987|serine incorporator 5##AK297467|SERINC5|256987|serine incorporator 5##NM_001174071|SERINC5|256987|serine incorporator 5##NM_001174072|SERINC5|256987|serine incorporator 5##NM_178276|SERINC5|256987|serine incorporator 5##NM_032567|SPZ1|84654|spermatogenic leucine zipper 1##AK098575|SPZ1|84654|spermatogenic leucine zipper 1##AK314007|SPZ1|84654|spermatogenic leucine zipper 1##AF333098|SPZ1|84654|spermatogenic leucine zipper 1##BC033798|SPZ1|84654|spermatogenic leucine zipper 1##NM_001105251|ZFYVE16|9765|zinc finger, FYVE domain containing 16##NM_014733|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC032227|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BX537424|ZFYVE16|9765|zinc finger, FYVE domain containing 16##CR933621|ZFYVE16|9765|zinc finger, FYVE domain containing 16##AB002303|ZFYVE16|9765|zinc finger, FYVE domain containing 16##BC030808|ZFYVE16|9765|zinc finger, FYVE domain containing 16	0.0	
chr8	142394621	142394709	reg1026208.p1	3.379	+	NM_005293	-17301	-	TSC_hg19_v1_chr8_-_142264157 BC157840 BC171836	-130475	-	AK128212 NM_001080431	-155993	-	TSC_hg19_v1_chr8_+_142402120 AK311257	7469	+	BC003105 NM_007079 NM_032611 TSC_hg19_v1_chr8_+_142432059 AF041434 AJ276554	37396	+	BC144560 AK125848 AK131461 NM_207414	122652	-	NM_005293|GPR20|2843|G protein-coupled receptor 20##BC157840|SLC45A4|57210|solute carrier family 45, member 4##BC171836|SLC45A4|57210|solute carrier family 45, member 4##AK128212|SLC45A4|57210|solute carrier family 45, member 4##NM_001080431|SLC45A4|57210|solute carrier family 45, member 4##BC003105|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_007079|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##NM_032611|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AF041434|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##AJ276554|PTP4A3|11156|protein tyrosine phosphatase type IVA, member 3##BC144560|FLJ43860|389690|FLJ43860 protein##AK125848|FLJ43860|389690|FLJ43860 protein##AK131461|FLJ43860|389690|FLJ43860 protein##NM_207414|FLJ43860|389690|FLJ43860 protein	0.0	
chr11	75943224	75943339	reg1039616.p1	3.378	+	TSC_hg19_v1_chr11_-_75921806 AK075540	-21477	-	AB590784 BT019492 BC074790 BC074791 BC113386 BC113388 AB070218 NM_004626 Y12692 AK313570	-25769	-	TSC_hg19_v1_chr11_+_75526254 BC013176 AB012958 BC064837 AK222772	-417003	+	TSC_hg19_v1_chr11_-_76091995 AB590785 AF007393 AF081567 HQ258648 NM_004705 AK291843 BC117138 BC117140 BC110304	148727	-	TSC_hg19_v1_chr11_+_76092383 AK125821 BC040665 AK095089	149142	+	TSC_hg19_v1_chr11_-_76155721 AK054718	212444	-	AK075540|WNT11|7481|wingless-type MMTV integration site family, member 11##BT019492|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074790|WNT11|7481|wingless-type MMTV integration site family, member 11##BC074791|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113386|WNT11|7481|wingless-type MMTV integration site family, member 11##BC113388|WNT11|7481|wingless-type MMTV integration site family, member 11##AB070218|WNT11|7481|wingless-type MMTV integration site family, member 11##NM_004626|WNT11|7481|wingless-type MMTV integration site family, member 11##Y12692|WNT11|7481|wingless-type MMTV integration site family, member 11##AK313570|WNT11|7481|wingless-type MMTV integration site family, member 11##BC013176|UVRAG|7405|UV radiation resistance associated gene##AB012958|UVRAG|7405|UV radiation resistance associated gene##BC064837|UVRAG|7405|UV radiation resistance associated gene##AK222772|UVRAG|7405|UV radiation resistance associated gene##AF007393|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AF081567|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##HQ258648|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##NM_004705|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK291843|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117138|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC117140|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##BC110304|PRKRIR|5612|protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)##AK125821|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##BC040665|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like##AK095089|LOC100506127|100506127|putative uncharacterized protein FLJ37770-like	0.0	
chr12	22820243	22820391	reg1042138.p1	3.378	+	TSC_hg19_v1_chr12_+_22778130 CU688188 BC006111 AL137750 AK074425	-42170	+	AF207600 TSC_hg19_v1_chr12_+_22778077 BC066907 NM_001039481 NM_018638	-42274	+	TSC_hg19_v1_chr12_-_22697446 AY166851 NM_014802 AK310753	-122851	-	NM_178010 AK098610 AK223536	917209	-	AK074317 TSC_hg19_v1_chr12_-_24102605 BC065532 AB081589 NM_006940	1282285	-	TSC_hg19_v1_chr12_-_24103855 AK299607 AK096569	1283537	-	BC006111|ETNK1|55500|ethanolamine kinase 1##AL137750|ETNK1|55500|ethanolamine kinase 1##AK074425|ETNK1|55500|ethanolamine kinase 1##AF207600|ETNK1|55500|ethanolamine kinase 1##BC066907|ETNK1|55500|ethanolamine kinase 1##NM_001039481|ETNK1|55500|ethanolamine kinase 1##NM_018638|ETNK1|55500|ethanolamine kinase 1##AY166851|KIAA0528|9847|KIAA0528##NM_014802|KIAA0528|9847|KIAA0528##AK310753|KIAA0528|9847|KIAA0528##NM_178010|SOX5|6660|SRY (sex determining region Y)-box 5##AK098610|SOX5|6660|SRY (sex determining region Y)-box 5##AK223536|SOX5|6660|SRY (sex determining region Y)-box 5##AK074317|SOX5|6660|SRY (sex determining region Y)-box 5##BC065532|SOX5|6660|SRY (sex determining region Y)-box 5##AB081589|SOX5|6660|SRY (sex determining region Y)-box 5##NM_006940|SOX5|6660|SRY (sex determining region Y)-box 5##AK299607|SOX5|6660|SRY (sex determining region Y)-box 5##AK096569|SOX5|6660|SRY (sex determining region Y)-box 5	0.0	
chr15	29604548	29604670	reg1028852.p1	3.378	+	TSC_hg19_v1_chr15_-_29562011 AK056957 AF490510 NM_138704	-42580	-	TSC_hg19_v1_chr15_-_29561989 BC041166 BC053999 BC035458	-42639	-	NM_001130414 NM_005503 AF047348 BC082986	-390760	+	NM_015307	258317	-	AK304758 TSC_hg19_v1_chr15_-_30114336	509733	-	TSC_hg19_v1_chr15_-_30114696 BC111712 BC036090 NM_003257 NM_175610	510014	-	AK056957|NDNL2|56160|necdin-like 2##AF490510|NDNL2|56160|necdin-like 2##NM_138704|NDNL2|56160|necdin-like 2##BC041166|NDNL2|56160|necdin-like 2##BC053999|NDNL2|56160|necdin-like 2##BC035458|NDNL2|56160|necdin-like 2##NM_001130414|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_005503|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##AF047348|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##BC082986|APBA2|321|amyloid beta (A4) precursor protein-binding, family A, member 2##NM_015307|FAM189A1|23359|family with sequence similarity 189, member A1##AK304758|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC111712|TJP1|7082|tight junction protein 1 (zona occludens 1)##BC036090|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_003257|TJP1|7082|tight junction protein 1 (zona occludens 1)##NM_175610|TJP1|7082|tight junction protein 1 (zona occludens 1)	0.0	
chr2	20407022	20407111	reg1030414.p2	3.378	+	NM_014713	-155278	-	TSC_hg19_v1_chr2_-_20251415 AY359028 D14696 BC003158 AK129875	-155639	-	CR456758 TSC_hg19_v1_chr2_-_20251382 BC000421 AK304433 BC093075	-155728	-	X60306 AB464260 CU679093 DQ893265 DQ896595 TSC_hg19_v1_chr2_-_20424892 AK299385 J05392 AK313974 AK222739 BC008765 AJ551176 AK311409 NM_002997	17721	-	TSC_hg19_v1_chr2_-_20425168 NM_001006946	18113	-	AF272350 TSC_hg19_v1_chr2_-_20512079	104983	-	NM_014713|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AY359028|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##D14696|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC003158|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK129875|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##CR456758|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC000421|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##AK304433|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##BC093075|LAPTM4A|9741|lysosomal protein transmembrane 4 alpha##X60306|SDC1|6382|syndecan 1##DQ893265|SDC1|6382|syndecan 1##DQ896595|SDC1|6382|syndecan 1##AK299385|SDC1|6382|syndecan 1##J05392|SDC1|6382|syndecan 1##AK313974|SDC1|6382|syndecan 1##AK222739|SDC1|6382|syndecan 1##BC008765|SDC1|6382|syndecan 1##AJ551176|SDC1|6382|syndecan 1##NM_002997|SDC1|6382|syndecan 1##NM_001006946|SDC1|6382|syndecan 1##AF272350|PUM2|23369|pumilio homolog 2 (Drosophila)	0.0	
chr4	101663360	101663462	reg1034181.p2	3.378	+	CU676062 AB590686 AB034695 AK222741 AK304568 AK291831 BC017781 AF205940 AK026875 AK313504 NM_001159694 NM_016242	-224251	-	AL832277 BC013592 TSC_hg19_v1_chr4_-_101111626 AK312926 AK094236 NM_145244	-551781	-	TSC_hg19_v1_chr4_+_100871641 AK123926	-791765	+	AB385587 AB451338 AB451487 AM393486 AM393713 CU693026 AY904364 BC025714 TSC_hg19_v1_chr4_-_102268080 L14778	604615	-	TSC_hg19_v1_chr4_-_102268343 AL353950	604961	-	AK290532 TSC_hg19_v1_chr4_-_102268547	605104	-	AB034695|EMCN|51705|endomucin##AK222741|EMCN|51705|endomucin##AK304568|EMCN|51705|endomucin##AK291831|EMCN|51705|endomucin##BC017781|EMCN|51705|endomucin##AF205940|EMCN|51705|endomucin##AK026875|EMCN|51705|endomucin##AK313504|EMCN|51705|endomucin##NM_001159694|EMCN|51705|endomucin##NM_016242|EMCN|51705|endomucin##AL832277|DDIT4L|115265|DNA-damage-inducible transcript 4-like##BC013592|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK312926|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK094236|DDIT4L|115265|DNA-damage-inducible transcript 4-like##NM_145244|DDIT4L|115265|DNA-damage-inducible transcript 4-like##AK123926|LOC256880|256880|uncharacterized LOC256880##AB451338|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AB451487|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393486|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AM393713|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AY904364|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##BC025714|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##L14778|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AL353950|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AK290532|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme	0.056133	
chr4	163761103	163761200	reg1038245.p1	3.378	+	AB033089 AK315152 BC036502 NM_001128427 NM_001128428 NM_020116	-676000	-	AK294459 NM_014247	-3572154	+	AK058100 NM_152543	-3804819	-	TSC_hg19_v1_chr4_-_164088002 AK097352	326841	-	TSC_hg19_v1_chr4_-_164088043 AK308601	326886	-	TSC_hg19_v1_chr4_-_164088073 BC008207 NM_001128931 NM_138386	326927	-	AB033089|FSTL5|56884|follistatin-like 5##AK315152|FSTL5|56884|follistatin-like 5##BC036502|FSTL5|56884|follistatin-like 5##NM_001128427|FSTL5|56884|follistatin-like 5##NM_001128428|FSTL5|56884|follistatin-like 5##NM_020116|FSTL5|56884|follistatin-like 5##AK294459|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##NM_014247|RAPGEF2|9693|Rap guanine nucleotide exchange factor (GEF) 2##AK058100|C4orf45|152940|chromosome 4 open reading frame 45##NM_152543|C4orf45|152940|chromosome 4 open reading frame 45##AK097352|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##AK308601|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##BC008207|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_001128931|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)##NM_138386|NAF1|92345|nuclear assembly factor 1 homolog (S. cerevisiae)	0.963037	CTCF.p2:21:0.963
chr6	126112868	126113008	reg1038680.p2	3.378	+	TSC_hg19_v1_chr6_+_126112105 BC036461 AK127512 AB074157 AK294558 BX537385 AL832621 AL832628 AB074156	-830	+	TSC_hg19_v1_chr6_+_126111841 NM_001122842 NM_001199621 NM_181782	-1085	+	TSC_hg19_v1_chr6_+_126102306 AF493978 NM_001199619 NM_001199620 AK307395 BC137094 BC137095	-10604	+	NM_001199622 TSC_hg19_v1_chr6_+_126240392 AK094706	127485	+	TSC_hg19_v1_chr6_+_126277915 NM_138571 BX647228 AK309857 BC015732 AK057688 AJ420577 AY035387 AY035388 AY486460 AY486461 DQ892201 DQ895396	165047	+	BC056878 NM_001031712 TSC_hg19_v1_chr6_+_126307625 AF532977 BC017696 AF182423	194664	+	BC036461|NCOA7|135112|nuclear receptor coactivator 7##AK127512|NCOA7|135112|nuclear receptor coactivator 7##AB074157|NCOA7|135112|nuclear receptor coactivator 7##AK294558|NCOA7|135112|nuclear receptor coactivator 7##BX537385|NCOA7|135112|nuclear receptor coactivator 7##AL832621|NCOA7|135112|nuclear receptor coactivator 7##AL832628|NCOA7|135112|nuclear receptor coactivator 7##AB074156|NCOA7|135112|nuclear receptor coactivator 7##NM_001122842|NCOA7|135112|nuclear receptor coactivator 7##NM_001199621|NCOA7|135112|nuclear receptor coactivator 7##NM_181782|NCOA7|135112|nuclear receptor coactivator 7##AF493978|NCOA7|135112|nuclear receptor coactivator 7##NM_001199619|NCOA7|135112|nuclear receptor coactivator 7##NM_001199620|NCOA7|135112|nuclear receptor coactivator 7##AK307395|NCOA7|135112|nuclear receptor coactivator 7##BC137094|NCOA7|135112|nuclear receptor coactivator 7##BC137095|NCOA7|135112|nuclear receptor coactivator 7##NM_001199622|NCOA7|135112|nuclear receptor coactivator 7##AK094706|NCOA7|135112|nuclear receptor coactivator 7##NM_138571|HINT3|135114|histidine triad nucleotide binding protein 3##BX647228|HINT3|135114|histidine triad nucleotide binding protein 3##AK309857|HINT3|135114|histidine triad nucleotide binding protein 3##BC015732|HINT3|135114|histidine triad nucleotide binding protein 3##AK057688|HINT3|135114|histidine triad nucleotide binding protein 3##AJ420577|HINT3|135114|histidine triad nucleotide binding protein 3##AY035387|HINT3|135114|histidine triad nucleotide binding protein 3##AY035388|HINT3|135114|histidine triad nucleotide binding protein 3##AY486460|HINT3|135114|histidine triad nucleotide binding protein 3##AY486461|HINT3|135114|histidine triad nucleotide binding protein 3##DQ892201|HINT3|135114|histidine triad nucleotide binding protein 3##DQ895396|HINT3|135114|histidine triad nucleotide binding protein 3##BC056878|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##NM_001031712|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF532977|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)##AF182423|TRMT11|60487|tRNA methyltransferase 11 homolog (S. cerevisiae)	0.05393	
chr6	43302358	43302486	reg1040123.p1	3.378	+	AB463553 AY555741 AY555742 AY555743 AY555744 NM_206922	-25893	-	TSC_hg19_v1_chr6_+_43266009 AK290806 AK309570 AK314822 BC033805 AK290796 BC017963 DQ893614 DQ896844 AF210455 AY050498	-36370	+	TSC_hg19_v1_chr6_+_43265994 NM_006672 NM_153320 AF097518	-36425	+	TSC_hg19_v1_chr6_-_43337215 BC098434 AF090114 NM_014345 BC030687	34820	-	TSC_hg19_v1_chr6_+_43395310 AK000002 NM_001198934	92891	+	AY032599 NM_033450	97066	+	AY555741|CRIP3|401262|cysteine-rich protein 3##AY555742|CRIP3|401262|cysteine-rich protein 3##AY555743|CRIP3|401262|cysteine-rich protein 3##AY555744|CRIP3|401262|cysteine-rich protein 3##NM_206922|CRIP3|401262|cysteine-rich protein 3##AK290806|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK309570|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK314822|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC033805|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AK290796|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC017963|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ893614|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##DQ896844|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF210455|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AY050498|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_006672|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##NM_153320|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##AF097518|SLC22A7|10864|solute carrier family 22 (organic anion transporter), member 7##BC098434|ZNF318|24149|zinc finger protein 318##AF090114|ZNF318|24149|zinc finger protein 318##NM_014345|ZNF318|24149|zinc finger protein 318##BC030687|ZNF318|24149|zinc finger protein 318##AK000002|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_001198934|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##AY032599|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10##NM_033450|ABCC10|89845|ATP-binding cassette, sub-family C (CFTR/MRP), member 10	0.426918	CTCF.p2:-10:0.427
chr8	30182278	30182344	reg1031853.p2	3.378	+	D84145 NM_006571 TSC_hg19_v1_chr8_+_30013882 AK314128 BC013175 CR456851	-168456	+	NM_001100916 EU518495	-180111	-	TSC_hg19_v1_chr8_+_29952989 AK075363 AF161461 DQ891897 DQ895083 CR541735 CR541760	-229312	+	Z36874 TSC_hg19_v1_chr8_+_30209759	27426	+	NM_001008710 NM_001008711 NM_001008712 NM_006867 AK304858 D84107 D84108 D84109 D84110 TSC_hg19_v1_chr8_+_30242056 BC003608	59698	+	NM_001206847	313805	+	D84145|DCTN6|10671|dynactin 6##NM_006571|DCTN6|10671|dynactin 6##AK314128|DCTN6|10671|dynactin 6##BC013175|DCTN6|10671|dynactin 6##CR456851|DCTN6|10671|dynactin 6##NM_001100916|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##EU518495|MBOAT4|619373|membrane bound O-acyltransferase domain containing 4##AK075363|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##AF161461|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##DQ891897|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##DQ895083|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##CR541735|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##CR541760|LEPROTL1|23484|leptin receptor overlapping transcript-like 1##NM_001008710|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008711|RBPMS|11030|RNA binding protein with multiple splicing##NM_001008712|RBPMS|11030|RNA binding protein with multiple splicing##NM_006867|RBPMS|11030|RNA binding protein with multiple splicing##AK304858|RBPMS|11030|RNA binding protein with multiple splicing##D84107|RBPMS|11030|RNA binding protein with multiple splicing##D84108|RBPMS|11030|RNA binding protein with multiple splicing##D84109|RBPMS|11030|RNA binding protein with multiple splicing##D84110|RBPMS|11030|RNA binding protein with multiple splicing##BC003608|RBPMS|11030|RNA binding protein with multiple splicing##NM_001206847|LOC100507341|100507341|uncharacterized LOC100507341	0.0	
chr9	4971058	4971232	reg1045660.p1	3.378	+	TSC_hg19_v1_chr9_+_4839769 EF553527	-131377	+	TSC_hg19_v1_chr9_+_4792995 AJ276894 EU831474 EU831561 AF067172	-178102	+	TSC_hg19_v1_chr9_+_4792936 AK022904 BC001025 AK225872	-178222	+	TSC_hg19_v1_chr9_+_4985085 AK292525	13942	+	TSC_hg19_v1_chr9_+_4985271 AF005216 NM_004972 AF058925	14114	+	AF135824 HQ258002 AF156094 NM_007179 BC126473 BC126475	214468	-	EF553527|RCL1|10171|RNA terminal phosphate cyclase-like 1##AJ276894|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831474|RCL1|10171|RNA terminal phosphate cyclase-like 1##EU831561|RCL1|10171|RNA terminal phosphate cyclase-like 1##AF067172|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK022904|RCL1|10171|RNA terminal phosphate cyclase-like 1##BC001025|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK225872|RCL1|10171|RNA terminal phosphate cyclase-like 1##AK292525|JAK2|3717|Janus kinase 2##AF005216|JAK2|3717|Janus kinase 2##NM_004972|JAK2|3717|Janus kinase 2##AF058925|JAK2|3717|Janus kinase 2##AF135824|INSL6|11172|insulin-like 6##HQ258002|INSL6|11172|insulin-like 6##AF156094|INSL6|11172|insulin-like 6##NM_007179|INSL6|11172|insulin-like 6##BC126473|INSL6|11172|insulin-like 6##BC126475|INSL6|11172|insulin-like 6	0.0	
chr11	76385534	76385618	reg1022281.p1	3.377	+	BC052210 TSC_hg19_v1_chr11_-_76381792 BC070079 NM_001128922	-3767	-	Z24680 TSC_hg19_v1_chr11_-_76380952 AK314971 NM_005512	-4608	-	TSC_hg19_v1_chr11_+_76156061 AK304043 BC033404 NM_020193 AK309621 BC021688 AK125114	-229473	+	TSC_hg19_v1_chr11_+_76494400 NM_015516 AK091475 AX747009 AK075476 AK313405 AY358317 BC020975	108701	+	TSC_hg19_v1_chr11_+_76571961 NM_018367 AK315000 AF327353 AF214454	186356	+	TSC_hg19_v1_chr11_+_76571985 AK308856 AK002100 AK316120 AK295327 AK295142 AK294978 BC049837 BC063034 AK293800 BC073853 CU687264	186417	+	BC052210|LRRC32|2615|leucine rich repeat containing 32##BC070079|LRRC32|2615|leucine rich repeat containing 32##NM_001128922|LRRC32|2615|leucine rich repeat containing 32##Z24680|LRRC32|2615|leucine rich repeat containing 32##AK314971|LRRC32|2615|leucine rich repeat containing 32##NM_005512|LRRC32|2615|leucine rich repeat containing 32##AK304043|C11orf30|56946|chromosome 11 open reading frame 30##BC033404|C11orf30|56946|chromosome 11 open reading frame 30##NM_020193|C11orf30|56946|chromosome 11 open reading frame 30##AK309621|C11orf30|56946|chromosome 11 open reading frame 30##BC021688|C11orf30|56946|chromosome 11 open reading frame 30##AK125114|C11orf30|56946|chromosome 11 open reading frame 30##NM_015516|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK091475|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK075476|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AK313405|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##AY358317|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##BC020975|TSKU|25987|tsukushi small leucine rich proteoglycan homolog (Xenopus laevis)##NM_018367|ACER3|55331|alkaline ceramidase 3##AK315000|ACER3|55331|alkaline ceramidase 3##AF327353|ACER3|55331|alkaline ceramidase 3##AF214454|ACER3|55331|alkaline ceramidase 3##AK308856|ACER3|55331|alkaline ceramidase 3##AK002100|ACER3|55331|alkaline ceramidase 3##AK316120|ACER3|55331|alkaline ceramidase 3##AK295327|ACER3|55331|alkaline ceramidase 3##AK295142|ACER3|55331|alkaline ceramidase 3##AK294978|ACER3|55331|alkaline ceramidase 3##BC049837|ACER3|55331|alkaline ceramidase 3##BC063034|ACER3|55331|alkaline ceramidase 3##AK293800|ACER3|55331|alkaline ceramidase 3##BC073853|ACER3|55331|alkaline ceramidase 3	0.0	
chr1	22345901	22346015	reg1038354.p2	3.377	+	BC005918 BC015103 D00306 NM_005747 BC007028 AK225620 AK308514 BC008383 CU675183 CU678941 DQ893182 DQ896490	-17801	+	NM_007352 AK092382 AK308518 AX747509 BC005216 M18692 AK315798 AK308510 M16630	-42479	+	TSC_hg19_v1_chr1_-_22263804 X62515 NM_005529 M85289	-82192	-	TSC_hg19_v1_chr1_+_22352003 AF161506 BC016053	6054	+	NM_001039802 NM_001791 NM_044472 TSC_hg19_v1_chr1_+_22379201 BC018266 AL121734 AL121735 BC002711 AL121736 AK311375 AK316449 AK303994 AK297465 M57298	33212	+	TSC_hg19_v1_chr1_+_22379812 AL121737	33847	+	BC005918|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC015103|CELA3A|10136|chymotrypsin-like elastase family, member 3A##D00306|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_005747|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC007028|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK225620|CELA3A|10136|chymotrypsin-like elastase family, member 3A##AK308514|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC008383|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ893182|CELA3A|10136|chymotrypsin-like elastase family, member 3A##DQ896490|CELA3A|10136|chymotrypsin-like elastase family, member 3A##NM_007352|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK092382|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308518|CELA3A|10136|chymotrypsin-like elastase family, member 3A##BC005216|CELA3B|23436|chymotrypsin-like elastase family, member 3B##M18692|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK315798|CELA3B|23436|chymotrypsin-like elastase family, member 3B##AK308510|CELA3A|10136|chymotrypsin-like elastase family, member 3A##M16630|CELA3B|23436|chymotrypsin-like elastase family, member 3B##X62515|HSPG2|3339|heparan sulfate proteoglycan 2##NM_005529|HSPG2|3339|heparan sulfate proteoglycan 2##M85289|HSPG2|3339|heparan sulfate proteoglycan 2##AF161506|LINC00339|29092|long intergenic non-protein coding RNA 339##BC016053|LINC00339|29092|long intergenic non-protein coding RNA 339##NM_001039802|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_001791|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##NM_044472|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC018266|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121734|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121735|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##BC002711|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121736|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK311375|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK316449|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK303994|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AK297465|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##M57298|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)##AL121737|CDC42|998|cell division cycle 42 (GTP binding protein, 25kDa)	0.0	
chr17	618526	618606	reg1027986.p2	3.377	+	CU675257 EU021218 EU434648 EU434649 EU434650 AF246287 AY444797 BC006116 TSC_hg19_v1_chr17_-_618080 BC040223 AF318335 AK290343 AK092532 AX747587 NM_001128159 NM_018289	-527	-	TSC_hg19_v1_chr17_+_260159 AK128660 NM_001013672 BC141806 BC057385 BC070116 CU687042	-358386	+	TSC_hg19_v1_chr17_-_202619 NM_001190411 NM_001190412 NM_001190413 NM_006987	-415942	-	TSC_hg19_v1_chr17_+_635806 AF477201 BC026023 AK025935 AK292065 NM_024792 CU693104 AK125146	17220	+	TSC_hg19_v1_chr17_-_655412 AB463052 AF173856 BC036024 AK302722 BC032084 BC020062	36854	-	TSC_hg19_v1_chr17_-_655502 NM_015721	36919	-	EU021218|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434648|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434649|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##EU434650|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF246287|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AY444797|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC006116|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##BC040223|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AF318335|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK290343|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK092532|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_001128159|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##NM_018289|VPS53|55275|vacuolar protein sorting 53 homolog (S. cerevisiae)##AK128660|C17orf97|400566|chromosome 17 open reading frame 97##NM_001013672|C17orf97|400566|chromosome 17 open reading frame 97##BC141806|C17orf97|400566|chromosome 17 open reading frame 97##BC057385|C17orf97|400566|chromosome 17 open reading frame 97##BC070116|C17orf97|400566|chromosome 17 open reading frame 97##NM_001190411|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190412|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_001190413|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##NM_006987|RPH3AL|9501|rabphilin 3A-like (without C2 domains)##AF477201|FAM57A|79850|family with sequence similarity 57, member A##BC026023|FAM57A|79850|family with sequence similarity 57, member A##AK025935|FAM57A|79850|family with sequence similarity 57, member A##AK292065|FAM57A|79850|family with sequence similarity 57, member A##NM_024792|FAM57A|79850|family with sequence similarity 57, member A##AK125146|FAM57A|79850|family with sequence similarity 57, member A##AF173856|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC036024|GEMIN4|50628|gem (nuclear organelle) associated protein 4##AK302722|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC032084|GEMIN4|50628|gem (nuclear organelle) associated protein 4##BC020062|GEMIN4|50628|gem (nuclear organelle) associated protein 4##NM_015721|GEMIN4|50628|gem (nuclear organelle) associated protein 4	0.0	
chr19	14725029	14725113	reg1041481.p2	3.377	+	AK127809 NM_001204118 NM_207390 BC140848 BC144664 BC144665	-31157	+	CR450354 DQ891899 DQ895085 AF217091 TSC_hg19_v1_chr19_-_14682879 M33374 AF112200 BC002595 NM_004146	-42222	-	TSC_hg19_v1_chr19_+_14640435 AK001416 AK315412 BC007801 BC013881 BC005952 AF038958 BC002425 BC034484 AF222742 AX771269 AF038959 AB529027 DQ891949 DQ895135 EU832830 GQ129437	-84612	+	AY358817 AK290909 BC121130 BC121131 BC128053 BC148282 AK298653 AF239764 BC142639 AL832663 NM_032571	60606	-	AK291471 AK094028 AX748419 TSC_hg19_v1_chr19_+_14800878 AK307147 BC064571 NM_032433 BC048107 BX647475 AF372702 AK309208	75693	+	BC082991 AF114491 AK301458 AK222891 AK298700 TSC_hg19_v1_chr19_-_14887654	162567	-	NM_001204118|CLEC17A|388512|C-type lectin domain family 17, member A##NM_207390|CLEC17A|388512|C-type lectin domain family 17, member A##BC140848|CLEC17A|388512|C-type lectin domain family 17, member A##BC144664|CLEC17A|388512|C-type lectin domain family 17, member A##BC144665|CLEC17A|388512|C-type lectin domain family 17, member A##CR450354|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ891899|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##DQ895085|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF217091|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##M33374|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AF112200|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##BC002595|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##NM_004146|NDUFB7|4713|NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 7, 18kDa##AK001416|TECR|9524|trans-2,3-enoyl-CoA reductase##AK315412|TECR|9524|trans-2,3-enoyl-CoA reductase##BC007801|TECR|9524|trans-2,3-enoyl-CoA reductase##BC013881|TECR|9524|trans-2,3-enoyl-CoA reductase##BC005952|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038958|TECR|9524|trans-2,3-enoyl-CoA reductase##BC002425|TECR|9524|trans-2,3-enoyl-CoA reductase##BC034484|TECR|9524|trans-2,3-enoyl-CoA reductase##AF222742|TECR|9524|trans-2,3-enoyl-CoA reductase##AF038959|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ891949|TECR|9524|trans-2,3-enoyl-CoA reductase##DQ895135|TECR|9524|trans-2,3-enoyl-CoA reductase##EU832830|TECR|9524|trans-2,3-enoyl-CoA reductase##GQ129437|TECR|9524|trans-2,3-enoyl-CoA reductase##AY358817|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK290909|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121130|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC121131|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC128053|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC148282|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK298653|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AF239764|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##BC142639|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AL832663|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##NM_032571|EMR3|84658|egf-like module containing, mucin-like, hormone receptor-like 3##AK291471|ZNF333|84449|zinc finger protein 333##AK094028|ZNF333|84449|zinc finger protein 333##AK307147|ZNF333|84449|zinc finger protein 333##BC064571|ZNF333|84449|zinc finger protein 333##NM_032433|ZNF333|84449|zinc finger protein 333##BC048107|ZNF333|84449|zinc finger protein 333##BX647475|ZNF333|84449|zinc finger protein 333##AF372702|ZNF333|84449|zinc finger protein 333##AK309208|ZNF333|84449|zinc finger protein 333##BC082991|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AF114491|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK301458|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK222891|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2##AK298700|EMR2|30817|egf-like module containing, mucin-like, hormone receptor-like 2	0.010319	
chr19	52179319	52179465	reg1041544.p2	3.377	+	AY358369 AY854038 AK298284 NM_001098612	-29323	-	DQ892433 AF170484 BC029896 AK225753 U71383 NM_003830	-45735	-	NM_007147 BC007778 AK292687 BC052997 D50419	-104845	+	NM_001523 U59269 BC035837 AM904814	47840	-	M60626 S49810 M60627 BC005315 NM_001193306 NM_002029 AK314935	75738	-	NM_001005738 M88107 D10922 AK290557	85066	+	AY854038|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##AK298284|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##NM_001098612|SIGLEC14|100049587|sialic acid binding Ig-like lectin 14##DQ892433|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AF170484|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##BC029896|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##AK225753|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##U71383|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_003830|SIGLEC5|8778|sialic acid binding Ig-like lectin 5##NM_007147|ZNF175|7728|zinc finger protein 175##BC007778|ZNF175|7728|zinc finger protein 175##AK292687|ZNF175|7728|zinc finger protein 175##BC052997|ZNF175|7728|zinc finger protein 175##D50419|ZNF175|7728|zinc finger protein 175##NM_001523|HAS1|3036|hyaluronan synthase 1##U59269|HAS1|3036|hyaluronan synthase 1##BC035837|HAS1|3036|hyaluronan synthase 1##AM904814|HAS1|3036|hyaluronan synthase 1##M60626|FPR1|2357|formyl peptide receptor 1##S49810|FPR1|2357|formyl peptide receptor 1##M60627|FPR1|2357|formyl peptide receptor 1##BC005315|FPR1|2357|formyl peptide receptor 1##NM_001193306|FPR1|2357|formyl peptide receptor 1##NM_002029|FPR1|2357|formyl peptide receptor 1##AK314935|FPR1|2357|formyl peptide receptor 1##NM_001005738|FPR2|2358|formyl peptide receptor 2##M88107|FPR2|2358|formyl peptide receptor 2##D10922|FPR2|2358|formyl peptide receptor 2##AK290557|FPR2|2358|formyl peptide receptor 2	0.998073	CTCF.p2:-32:0.998
chr2	16795017	16795197	reg1005423.p2	3.377	+	TSC_hg19_v1_chr2_+_16082162 AB464743 BT007384	-712940	+	TSC_hg19_v1_chr2_+_16081955 BC002712	-713112	+	BC002892 TSC_hg19_v1_chr2_-_16081802 S49953	-713334	-	TSC_hg19_v1_chr2_-_16847097 BC038971 AL136704 AK055334 NM_030797	52037	-	DQ860102 NM_001099218	904598	-	NM_003385 AK308816 TSC_hg19_v1_chr2_+_17721960 BC022012	926780	+	BT007384|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002712|MYCN|4613|v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)##BC002892|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##S49953|MYCNOS|10408|MYCN opposite strand/antisense RNA (non-protein coding)##BC038971|FAM49A|81553|family with sequence similarity 49, member A##AL136704|FAM49A|81553|family with sequence similarity 49, member A##AK055334|FAM49A|81553|family with sequence similarity 49, member A##NM_030797|FAM49A|81553|family with sequence similarity 49, member A##DQ860102|RAD51AP2|729475|RAD51 associated protein 2##NM_001099218|RAD51AP2|729475|RAD51 associated protein 2##NM_003385|VSNL1|7447|visinin-like 1##AK308816|VSNL1|7447|visinin-like 1##BC022012|VSNL1|7447|visinin-like 1	0.0	
chr2	216211907	216212012	reg1042212.p1	3.377	+	TSC_hg19_v1_chr2_+_216176824 AB062403 BC008879 AB590190 DQ893262 DQ896591 CU679167	-35118	+	D89976 TSC_hg19_v1_chr2_+_216176813	-35147	+	NM_004044 TSC_hg19_v1_chr2_+_216176781 AK313066 D82348 AK298142	-35221	+	AK297733 TSC_hg19_v1_chr2_-_216241378	29391	-	TSC_hg19_v1_chr2_-_216242918 AJ320525 AJ320526 AJ320527	30985	-	U60067 U60068 TSC_hg19_v1_chr2_-_216245725	33691	-	AB062403|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##BC008879|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##DQ893262|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##DQ896591|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##D89976|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##NM_004044|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK313066|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##D82348|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK298142|ATIC|471|5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase##AK297733|FN1|2335|fibronectin 1##AJ320525|FN1|2335|fibronectin 1##AJ320526|FN1|2335|fibronectin 1##AJ320527|FN1|2335|fibronectin 1##U60067|FN1|2335|fibronectin 1##U60068|FN1|2335|fibronectin 1	0.0	
chr22	46080090	46080161	reg1037857.p1	3.377	+	CR456568 TSC_hg19_v1_chr22_+_46067931 AK095309 CR457381 DQ893240 DQ896570	-12208	+	AK025734 TSC_hg19_v1_chr22_+_46067746 AF119662 BC007508	-12369	+	TSC_hg19_v1_chr22_+_46067733 AF086923 AL050282	-12396	+	AF416743 NM_058238 TSC_hg19_v1_chr22_-_46373045	292904	-	TSC_hg19_v1_chr22_+_46449736 BC036832	369599	+	AB528792 AK001807 NM_018280 TSC_hg19_v1_chr22_-_46450052	369887	-	CR456568|ATXN10|25814|ataxin 10##AK095309|ATXN10|25814|ataxin 10##CR457381|ATXN10|25814|ataxin 10##DQ893240|ATXN10|25814|ataxin 10##DQ896570|ATXN10|25814|ataxin 10##AK025734|ATXN10|25814|ataxin 10##AF119662|ATXN10|25814|ataxin 10##BC007508|ATXN10|25814|ataxin 10##AF086923|ATXN10|25814|ataxin 10##AL050282|ATXN10|25814|ataxin 10##AF416743|WNT7B|7477|wingless-type MMTV integration site family, member 7B##NM_058238|WNT7B|7477|wingless-type MMTV integration site family, member 7B##AK001807|C22orf26|55267|chromosome 22 open reading frame 26##NM_018280|C22orf26|55267|chromosome 22 open reading frame 26	0.0	
chr6	155902185	155902332	reg1040558.p2	3.377	+	AF190122 NM_015718	-125222	-	TSC_hg19_v1_chr6_-_155635619 BC005183 BC017788 NM_016020 AF151833 BC054007 AK289484	-266635	-	AB464304 CU676068 DQ891970 DQ895159 TSC_hg19_v1_chr6_-_155635608	-266673	-	TSC_hg19_v1_chr6_+_157099052 NM_017519 NM_020732 Y08266	1196805	+	TSC_hg19_v1_chr6_+_157099206 AB587572	1196967	+	TSC_hg19_v1_chr6_+_157099283 AF521671	1197026	+	AF190122|NOX3|50508|NADPH oxidase 3##NM_015718|NOX3|50508|NADPH oxidase 3##BC005183|TFB1M|51106|transcription factor B1, mitochondrial##BC017788|TFB1M|51106|transcription factor B1, mitochondrial##NM_016020|TFB1M|51106|transcription factor B1, mitochondrial##AF151833|TFB1M|51106|transcription factor B1, mitochondrial##BC054007|TFB1M|51106|transcription factor B1, mitochondrial##AK289484|TFB1M|51106|transcription factor B1, mitochondrial##DQ891970|TFB1M|51106|transcription factor B1, mitochondrial##DQ895159|TFB1M|51106|transcription factor B1, mitochondrial##NM_017519|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##NM_020732|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##Y08266|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)##AF521671|ARID1B|57492|AT rich interactive domain 1B (SWI1-like)	0.011287	
chr7	2903415	2903555	reg1038399.p1	3.377	+	AK295830 AF493901 L01694 AB463060 TSC_hg19_v1_chr7_-_2883943 NM_007353 BC087537 BC111464	-19677	-	AK289723 AB075830 BC146753 NM_133463	-184327	+	TSC_hg19_v1_chr7_+_2671642 BC131824 AB162931	-231782	+	TSC_hg19_v1_chr7_-_3083346 AF322641 AK074049 NM_032415 AK097139	179977	-	TSC_hg19_v1_chr7_+_3340924 AY310398 NM_152744	437514	+	TSC_hg19_v1_chr7_+_4721925 NM_001037165	1818353	+	AK295830|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AF493901|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##L01694|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##NM_007353|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC087537|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##BC111464|GNA12|2768|guanine nucleotide binding protein (G protein) alpha 12##AK289723|AMZ1|155185|archaelysin family metallopeptidase 1##AB075830|AMZ1|155185|archaelysin family metallopeptidase 1##BC146753|AMZ1|155185|archaelysin family metallopeptidase 1##NM_133463|AMZ1|155185|archaelysin family metallopeptidase 1##BC131824|TTYH3|80727|tweety homolog 3 (Drosophila)##AB162931|TTYH3|80727|tweety homolog 3 (Drosophila)##AF322641|CARD11|84433|caspase recruitment domain family, member 11##AK074049|CARD11|84433|caspase recruitment domain family, member 11##NM_032415|CARD11|84433|caspase recruitment domain family, member 11##AK097139|CARD11|84433|caspase recruitment domain family, member 11##AY310398|SDK1|221935|sidekick cell adhesion molecule 1##NM_152744|SDK1|221935|sidekick cell adhesion molecule 1##NM_001037165|FOXK1|221937|forkhead box K1	0.0	
chr7	76091120	76091198	reg1035645.p2	3.377	+	NM_001102594 NM_001102595 NM_020892 BC018555 DQ010329 AK293226 TSC_hg19_v1_chr7_+_76091025 AK023924 AB040961 BC008856 BC026059 BC093079	-132	+	X56777 M60504 NM_001110354	-36898	+	BC113840 AK172783 AJ312755 NM_080744	-52207	-	AY225124 AY225125 CU679151 DQ893264 DQ896593 NM_001102596	18667	+	NM_030570 NM_182684 AK290096 AY233462 BC004304 AK056760 CU678662	48697	+	TSC_hg19_v1_chr7_+_76178647 BC090058	87473	+	NM_001102594|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102595|DTX2|113878|deltex homolog 2 (Drosophila)##NM_020892|DTX2|113878|deltex homolog 2 (Drosophila)##BC018555|DTX2|113878|deltex homolog 2 (Drosophila)##DQ010329|DTX2|113878|deltex homolog 2 (Drosophila)##AK293226|DTX2|113878|deltex homolog 2 (Drosophila)##AK023924|DTX2|113878|deltex homolog 2 (Drosophila)##AB040961|DTX2|113878|deltex homolog 2 (Drosophila)##BC008856|DTX2|113878|deltex homolog 2 (Drosophila)##BC026059|DTX2|113878|deltex homolog 2 (Drosophila)##BC093079|DTX2|113878|deltex homolog 2 (Drosophila)##X56777|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##M60504|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##NM_001110354|ZP3|7784|zona pellucida glycoprotein 3 (sperm receptor)##BC113840|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##AK172783|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##AJ312755|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##NM_080744|SRCRB4D|136853|scavenger receptor cysteine rich domain containing, group B (4 domains)##AY225124|DTX2|113878|deltex homolog 2 (Drosophila)##AY225125|DTX2|113878|deltex homolog 2 (Drosophila)##DQ893264|DTX2|113878|deltex homolog 2 (Drosophila)##DQ896593|DTX2|113878|deltex homolog 2 (Drosophila)##NM_001102596|DTX2|113878|deltex homolog 2 (Drosophila)##NM_030570|UPK3B|80761|uroplakin 3B##NM_182684|UPK3B|80761|uroplakin 3B##AK290096|UPK3B|80761|uroplakin 3B##AY233462|UPK3B|80761|uroplakin 3B##BC004304|UPK3B|80761|uroplakin 3B##AK056760|UPK3B|80761|uroplakin 3B##BC090058|LOC100133091|100133091|uncharacterized LOC100133091	0.0	
chr11	1961092	1961200	reg1034953.p1	3.376	+	NM_001042780 NM_001042781 NM_001042782 NM_006757 BC062430 TSC_hg19_v1_chr11_+_1940935 BX640689 BC050446 AK056968	-20259	+	NM_001013254 NM_001013255	-69021	+	NM_001013253	-71244	+	TSC_hg19_v1_chr11_+_1968573 NM_021134 U26596 Z49254 AK313805 AK128774	7395	+	BC027710 TSC_hg19_v1_chr11_+_1968589	7443	+	BC106079 BC010185 TSC_hg19_v1_chr11_-_2016854	55652	-	NM_001042780|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042781|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001042782|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_006757|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC062430|TNNT3|7140|troponin T type 3 (skeletal, fast)##BX640689|TNNT3|7140|troponin T type 3 (skeletal, fast)##BC050446|TNNT3|7140|troponin T type 3 (skeletal, fast)##AK056968|TNNT3|7140|troponin T type 3 (skeletal, fast)##NM_001013254|LSP1|4046|lymphocyte-specific protein 1##NM_001013255|LSP1|4046|lymphocyte-specific protein 1##NM_001013253|LSP1|4046|lymphocyte-specific protein 1##NM_021134|MRPL23|6150|mitochondrial ribosomal protein L23##U26596|MRPL23|6150|mitochondrial ribosomal protein L23##Z49254|MRPL23|6150|mitochondrial ribosomal protein L23##AK313805|MRPL23|6150|mitochondrial ribosomal protein L23##AK128774|MRPL23|6150|mitochondrial ribosomal protein L23##BC027710|MRPL23|6150|mitochondrial ribosomal protein L23##BC010185|H19|283120|H19, imprinted maternally expressed transcript (non-protein coding)	0.0	
chr1	154990269	154990449	reg1004849.p2	3.376	+	NM_001252406 TSC_hg19_v1_chr1_+_154975235 AK304762	-15112	+	TSC_hg19_v1_chr1_+_154975120 NM_001252405 NM_015872 AK291619 CR749303 BC012070	-15273	+	AF268478 BC069140 NM_018655 BC096714 BC098148 BC098246 BC098253 AB451457	-24287	+	BC111794 AK057496 NM_144622	15886	-	AK301935 NM_001143687 NM_152494 AK057347 AK301902 AK301876 BC064844	16004	+	TSC_hg19_v1_chr1_+_155023771 AK000667 AY560593 AY560594 AY560595 AY560596 AY560597 AY560598 AY560599 AY560600 AY560601 AY576417 NM_003815 NM_207191 NM_207194 NM_207195 NM_207196 NM_207197	33400	+	NM_001252406|ZBTB7B|51043|zinc finger and BTB domain containing 7B##AK304762|ZBTB7B|51043|zinc finger and BTB domain containing 7B##NM_001252405|ZBTB7B|51043|zinc finger and BTB domain containing 7B##NM_015872|ZBTB7B|51043|zinc finger and BTB domain containing 7B##AK291619|ZBTB7B|51043|zinc finger and BTB domain containing 7B##CR749303|ZBTB7B|51043|zinc finger and BTB domain containing 7B##BC012070|ZBTB7B|51043|zinc finger and BTB domain containing 7B##AF268478|LENEP|55891|lens epithelial protein##BC069140|LENEP|55891|lens epithelial protein##NM_018655|LENEP|55891|lens epithelial protein##BC096714|LENEP|55891|lens epithelial protein##BC098148|LENEP|55891|lens epithelial protein##BC098246|LENEP|55891|lens epithelial protein##BC098253|LENEP|55891|lens epithelial protein##AB451457|LENEP|55891|lens epithelial protein##BC111794|DCST2|127579|DC-STAMP domain containing 2##AK057496|DCST2|127579|DC-STAMP domain containing 2##NM_144622|DCST2|127579|DC-STAMP domain containing 2##AK301935|DCST1|149095|DC-STAMP domain containing 1##NM_001143687|DCST1|149095|DC-STAMP domain containing 1##NM_152494|DCST1|149095|DC-STAMP domain containing 1##AK057347|DCST1|149095|DC-STAMP domain containing 1##AK301902|DCST1|149095|DC-STAMP domain containing 1##AK301876|DCST1|149095|DC-STAMP domain containing 1##BC064844|DCST1|149095|DC-STAMP domain containing 1##AK000667|ADAM15|8751|ADAM metallopeptidase domain 15##AY560593|ADAM15|8751|ADAM metallopeptidase domain 15##AY560594|ADAM15|8751|ADAM metallopeptidase domain 15##AY560595|ADAM15|8751|ADAM metallopeptidase domain 15##AY560596|ADAM15|8751|ADAM metallopeptidase domain 15##AY560597|ADAM15|8751|ADAM metallopeptidase domain 15##AY560598|ADAM15|8751|ADAM metallopeptidase domain 15##AY560599|ADAM15|8751|ADAM metallopeptidase domain 15##AY560600|ADAM15|8751|ADAM metallopeptidase domain 15##AY560601|ADAM15|8751|ADAM metallopeptidase domain 15##AY576417|ADAM15|8751|ADAM metallopeptidase domain 15##NM_003815|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207191|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207194|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207195|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207196|ADAM15|8751|ADAM metallopeptidase domain 15##NM_207197|ADAM15|8751|ADAM metallopeptidase domain 15	0.0	
chr15	40857135	40857209	reg1036538.p1	3.376	+	NM_130468 AB066595 BC049214 TSC_hg19_v1_chr15_+_40763222 BC053633 AF282905 AK074739 CU690606 AF401222 AY358446 BC023653	-93830	+	TSC_hg19_v1_chr15_+_40733353 BC022782 NM_014952	-123809	+	TSC_hg19_v1_chr15_+_40698024 AK315296 BT007145 DQ892577 DQ895793	-159124	+	AK092214 AX747411 AL832032 AK098781 TSC_hg19_v1_chr15_-_40857211	30	-	TSC_hg19_v1_chr15_-_40857235 AK312842 AK293079 NM_001080791 NM_001080792 NM_052849	68	-	TSC_hg19_v1_chr15_+_40861497 AK301383	4326	+	NM_130468|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AB066595|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC049214|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC053633|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AF282905|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AK074739|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AF401222|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##AY358446|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC023653|CHST14|113189|carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14##BC022782|BAHD1|22893|bromo adjacent homology domain containing 1##NM_014952|BAHD1|22893|bromo adjacent homology domain containing 1##AK315296|IVD|3712|isovaleryl-CoA dehydrogenase##BT007145|IVD|3712|isovaleryl-CoA dehydrogenase##DQ892577|IVD|3712|isovaleryl-CoA dehydrogenase##DQ895793|IVD|3712|isovaleryl-CoA dehydrogenase##AK092214|C15orf57|90416|chromosome 15 open reading frame 57##AL832032|C15orf57|90416|chromosome 15 open reading frame 57##AK098781|C15orf57|90416|chromosome 15 open reading frame 57##AK312842|C15orf57|90416|chromosome 15 open reading frame 57##AK293079|C15orf57|90416|chromosome 15 open reading frame 57##NM_001080791|C15orf57|90416|chromosome 15 open reading frame 57##NM_001080792|C15orf57|90416|chromosome 15 open reading frame 57##NM_052849|C15orf57|90416|chromosome 15 open reading frame 57##AK301383|RPUSD2|27079|RNA pseudouridylate synthase domain containing 2	0.0	
chr16	25060915	25061032	reg1039069.p2	3.376	+	TSC_hg19_v1_chr16_-_25026691 AK027567 AK291691 BC080195 AK301500 NM_001006634 NM_018054	-34281	-	AJ306731 AJ306732 TSC_hg19_v1_chr16_-_25026604	-34361	-	AK125358 TSC_hg19_v1_chr16_-_24968918	-92081	-	TSC_hg19_v1_chr16_+_25078227 BC023651 AK093382	17316	+	TSC_hg19_v1_chr16_+_25123062 NM_001032391 NM_016309 AK223364 AF151826 BC001214	62088	+	TSC_hg19_v1_chr16_+_25123102 AK025884 AK225271 AK291885 AK314409 BC014217 AF037601 CU674610 AL137283 CU676933	62224	+	AK027567|ARHGAP17|55114|Rho GTPase activating protein 17##AK291691|ARHGAP17|55114|Rho GTPase activating protein 17##BC080195|ARHGAP17|55114|Rho GTPase activating protein 17##AK301500|ARHGAP17|55114|Rho GTPase activating protein 17##NM_001006634|ARHGAP17|55114|Rho GTPase activating protein 17##NM_018054|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306731|ARHGAP17|55114|Rho GTPase activating protein 17##AJ306732|ARHGAP17|55114|Rho GTPase activating protein 17##AK125358|ARHGAP17|55114|Rho GTPase activating protein 17##BC023651|LOC283887|283887|uncharacterized LOC283887##AK093382|LOC283887|283887|uncharacterized LOC283887##NM_001032391|LCMT1|51451|leucine carboxyl methyltransferase 1##NM_016309|LCMT1|51451|leucine carboxyl methyltransferase 1##AK223364|LCMT1|51451|leucine carboxyl methyltransferase 1##AF151826|LCMT1|51451|leucine carboxyl methyltransferase 1##BC001214|LCMT1|51451|leucine carboxyl methyltransferase 1##AK025884|LCMT1|51451|leucine carboxyl methyltransferase 1##AK225271|LCMT1|51451|leucine carboxyl methyltransferase 1##AK291885|LCMT1|51451|leucine carboxyl methyltransferase 1##AK314409|LCMT1|51451|leucine carboxyl methyltransferase 1##BC014217|LCMT1|51451|leucine carboxyl methyltransferase 1##AF037601|LCMT1|51451|leucine carboxyl methyltransferase 1##AL137283|LCMT1|51451|leucine carboxyl methyltransferase 1	0.0	
chr17	10075414	10075571	reg1042710.p1	3.376	+	TSC_hg19_v1_chr17_-_9940004 AK057761 BC006454 NM_201432	-135459	-	TSC_hg19_v1_chr17_-_9939883 AK292987	-135614	-	TSC_hg19_v1_chr17_-_9929603 AB007854 AK225165 AK299574 NM_001130831	-145871	-	TSC_hg19_v1_chr17_-_10101924 AY327406 NM_201433	26414	-	AF111782 NM_003802	200829	-	AK303395 NM_002472	249774	-	AK057761|GAS7|8522|growth arrest-specific 7##BC006454|GAS7|8522|growth arrest-specific 7##NM_201432|GAS7|8522|growth arrest-specific 7##AK292987|GAS7|8522|growth arrest-specific 7##AB007854|GAS7|8522|growth arrest-specific 7##AK225165|GAS7|8522|growth arrest-specific 7##AK299574|GAS7|8522|growth arrest-specific 7##NM_001130831|GAS7|8522|growth arrest-specific 7##AY327406|GAS7|8522|growth arrest-specific 7##NM_201433|GAS7|8522|growth arrest-specific 7##AF111782|MYH13|8735|myosin, heavy chain 13, skeletal muscle##NM_003802|MYH13|8735|myosin, heavy chain 13, skeletal muscle##AK303395|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal##NM_002472|MYH8|4626|myosin, heavy chain 8, skeletal muscle, perinatal	0.049034	
chr17	79518313	79518384	reg1039715.p1	3.376	+	AL834374 TSC_hg19_v1_chr17_-_79514725	-3654	-	NM_001077182 NM_012418 AF030165 BC126295 BC130330 HQ258429	-22862	+	TSC_hg19_v1_chr17_-_79479865 NM_001199954 NM_001614	-38483	-	TSC_hg19_v1_chr17_-_79519415 AK024644 BC008883 DQ989324 NM_025161	1051	-	DQ895356 TSC_hg19_v1_chr17_-_79604087 AB040932 AK000664	85675	-	TSC_hg19_v1_chr17_-_79604107 AK294473	85754	-	AL834374|C17orf70|80233|chromosome 17 open reading frame 70##NM_001077182|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##NM_012418|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##AF030165|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC126295|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##BC130330|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##HQ258429|FSCN2|25794|fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)##NM_001199954|ACTG1|71|actin, gamma 1##NM_001614|ACTG1|71|actin, gamma 1##AK024644|C17orf70|80233|chromosome 17 open reading frame 70##BC008883|C17orf70|80233|chromosome 17 open reading frame 70##DQ989324|C17orf70|80233|chromosome 17 open reading frame 70##NM_025161|C17orf70|80233|chromosome 17 open reading frame 70##DQ895356|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AB040932|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AK000664|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)##AK294473|NPLOC4|55666|nuclear protein localization 4 homolog (S. cerevisiae)	0.0	
chr19	36869938	36870073	reg1021685.p2	3.376	+	TSC_hg19_v1_chr19_-_36822604 BC041949	-47377	-	TSC_hg19_v1_chr19_+_36727378 AB464376 AK311486	-142653	+	AK313460 TSC_hg19_v1_chr19_+_36726957	-143085	+	TSC_hg19_v1_chr19_-_36870093 AK293103 NM_020917	87	-	TSC_hg19_v1_chr19_-_36909491 AK315709 GU388429 AL834267 NM_133466 AK074942	39516	-	AK027685 NM_032838 AK074497 TSC_hg19_v1_chr19_-_36980464 AK316262 AK299393 NM_001145343 NM_001145344 NM_001145345	110395	-	BC041949|LOC100506930|100506930|uncharacterized LOC100506930##AK311486|ZNF146|7705|zinc finger protein 146##AK313460|ZNF146|7705|zinc finger protein 146##AK293103|ZFP14|57677|zinc finger protein 14 homolog (mouse)##NM_020917|ZFP14|57677|zinc finger protein 14 homolog (mouse)##AK315709|ZFP82|284406|zinc finger protein 82 homolog (mouse)##GU388429|ZFP82|284406|zinc finger protein 82 homolog (mouse)##AL834267|ZFP82|284406|zinc finger protein 82 homolog (mouse)##NM_133466|ZFP82|284406|zinc finger protein 82 homolog (mouse)##AK074942|ZFP82|284406|zinc finger protein 82 homolog (mouse)##AK027685|ZNF566|84924|zinc finger protein 566##NM_032838|ZNF566|84924|zinc finger protein 566##AK074497|ZNF566|84924|zinc finger protein 566##AK316262|ZNF566|84924|zinc finger protein 566##AK299393|ZNF566|84924|zinc finger protein 566##NM_001145343|ZNF566|84924|zinc finger protein 566##NM_001145344|ZNF566|84924|zinc finger protein 566##NM_001145345|ZNF566|84924|zinc finger protein 566	0.0	
chr19	7179145	7179278	reg1034493.p1	3.376	+	TSC_hg19_v1_chr19_-_7099547 AK127494	-79660	-	TSC_hg19_v1_chr19_+_7069718 BC031208 AK297283 AK095524 BC003020 BC058040	-109496	+	AK315405 NM_001044387 NM_001044388 NM_024341	-109749	+	BC047591 BC117172 X02160 NM_000208 NM_001079817 M10051	114749	-	TSC_hg19_v1_chr19_+_7460030 NM_015318	280796	+	TSC_hg19_v1_chr19_+_7460061 AB011093	280866	+	BC031208|ZNF557|79230|zinc finger protein 557##AK297283|ZNF557|79230|zinc finger protein 557##AK095524|ZNF557|79230|zinc finger protein 557##BC003020|ZNF557|79230|zinc finger protein 557##BC058040|ZNF557|79230|zinc finger protein 557##AK315405|ZNF557|79230|zinc finger protein 557##NM_001044387|ZNF557|79230|zinc finger protein 557##NM_001044388|ZNF557|79230|zinc finger protein 557##NM_024341|ZNF557|79230|zinc finger protein 557##BC047591|INSR|3643|insulin receptor##BC117172|INSR|3643|insulin receptor##X02160|INSR|3643|insulin receptor##NM_000208|INSR|3643|insulin receptor##NM_001079817|INSR|3643|insulin receptor##M10051|INSR|3643|insulin receptor##NM_015318|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18##AB011093|ARHGEF18|23370|Rho/Rac guanine nucleotide exchange factor (GEF) 18	0.0	
chr2	10472001	10472181	reg1038238.p1	3.376	+	AK000596 NM_134421	-28266	+	TSC_hg19_v1_chr2_+_10443043 BC017482 NM_002149 BC009846 BC017028	-29042	+	BC093999 BC094001 NM_182626	-190112	+	D28365 BC014562 BC025296 X55362 TSC_hg19_v1_chr2_-_10588440	116269	-	TSC_hg19_v1_chr2_-_10588453 AK301956 NM_002539	116361	-	CU675005 TSC_hg19_v1_chr2_-_10830078 AK290680 AK024000 BC005125 AK024137 AK297169 AK299617	357953	-	AK000596|HPCAL1|3241|hippocalcin-like 1##NM_134421|HPCAL1|3241|hippocalcin-like 1##BC017482|HPCAL1|3241|hippocalcin-like 1##NM_002149|HPCAL1|3241|hippocalcin-like 1##BC009846|HPCAL1|3241|hippocalcin-like 1##BC017028|HPCAL1|3241|hippocalcin-like 1##BC093999|C2orf48|348738|chromosome 2 open reading frame 48##BC094001|C2orf48|348738|chromosome 2 open reading frame 48##NM_182626|C2orf48|348738|chromosome 2 open reading frame 48##D28365|ODC1|4953|ornithine decarboxylase 1##BC014562|ODC1|4953|ornithine decarboxylase 1##BC025296|ODC1|4953|ornithine decarboxylase 1##X55362|ODC1|4953|ornithine decarboxylase 1##AK301956|ODC1|4953|ornithine decarboxylase 1##NM_002539|ODC1|4953|ornithine decarboxylase 1##AK290680|NOL10|79954|nucleolar protein 10##AK024000|NOL10|79954|nucleolar protein 10##BC005125|NOL10|79954|nucleolar protein 10##AK024137|NOL10|79954|nucleolar protein 10##AK297169|NOL10|79954|nucleolar protein 10##AK299617|NOL10|79954|nucleolar protein 10	0.0	
chr2	171069503	171069609	reg1035927.p2	3.376	+	AF369908 AF391554 AF391555 AF391556 AF391557 AF391558 NM_001083615 NM_001171642 NM_138995 BC136620 BC144307	-34871	+	TSC_hg19_v1_chr2_+_170683963 NM_172070	-385598	+	BC000921 NM_014168 TSC_hg19_v1_chr2_-_170681416 AF201938 AF161482 AK001321 BC093014	-388171	-	TSC_hg19_v1_chr2_+_171571846 NM_001003845 AB096175	502302	+	TSC_hg19_v1_chr2_+_171571942 AB464708	502421	+	TSC_hg19_v1_chr2_+_171572707 BC069026	503154	+	AF369908|MYO3B|140469|myosin IIIB##AF391554|MYO3B|140469|myosin IIIB##AF391555|MYO3B|140469|myosin IIIB##AF391556|MYO3B|140469|myosin IIIB##AF391557|MYO3B|140469|myosin IIIB##AF391558|MYO3B|140469|myosin IIIB##NM_001083615|MYO3B|140469|myosin IIIB##NM_001171642|MYO3B|140469|myosin IIIB##NM_138995|MYO3B|140469|myosin IIIB##BC136620|MYO3B|140469|myosin IIIB##BC144307|MYO3B|140469|myosin IIIB##NM_172070|UBR3|130507|ubiquitin protein ligase E3 component n-recognin 3 (putative)##BC000921|METTL5|29081|methyltransferase like 5##NM_014168|METTL5|29081|methyltransferase like 5##AF201938|METTL5|29081|methyltransferase like 5##AF161482|METTL5|29081|methyltransferase like 5##AK001321|METTL5|29081|methyltransferase like 5##BC093014|METTL5|29081|methyltransferase like 5##NM_001003845|SP5|389058|Sp5 transcription factor##AB096175|SP5|389058|Sp5 transcription factor##BC069026|SP5|389058|Sp5 transcription factor	0.0	
chr2	214030801	214030874	reg1034517.p1	3.376	+	BC028936 NM_001079526	-14505	-	AK301503 AF130863 NM_016260	-15782	-	BC143741 BC143747 BC143749 BC112199 L07868 TSC_hg19_v1_chr2_-_213403308 AK308606 NM_001042599 NM_005235	-627522	-	AK124960 NM_001242575	118091	-	BC025379 TSC_hg19_v1_chr2_+_214149187 BC067756 NM_001025436 NM_024532 AK095036 BC009614 AK026377 BC100282 AK302351 AF310672 AF426740 CR749477 AF490390 AK310883 CR457359 AL832962	118320	+	BC146903 BC146911 BC146931 BC146935 BC171841 NM_001080500	1245623	+	BC028936|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_001079526|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AK301503|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##AF130863|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##NM_016260|IKZF2|22807|IKAROS family zinc finger 2 (Helios)##BC143741|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143747|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC143749|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##BC112199|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##L07868|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK308606|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_001042599|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##NM_005235|ERBB4|2066|v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)##AK124960|LOC100130451|100130451|uncharacterized LOC100130451##NM_001242575|LOC100130451|100130451|uncharacterized LOC100130451##BC025379|SPAG16|79582|sperm associated antigen 16##BC067756|SPAG16|79582|sperm associated antigen 16##NM_001025436|SPAG16|79582|sperm associated antigen 16##NM_024532|SPAG16|79582|sperm associated antigen 16##AK095036|SPAG16|79582|sperm associated antigen 16##BC009614|SPAG16|79582|sperm associated antigen 16##AK026377|SPAG16|79582|sperm associated antigen 16##BC100282|SPAG16|79582|sperm associated antigen 16##AK302351|SPAG16|79582|sperm associated antigen 16##AF310672|SPAG16|79582|sperm associated antigen 16##AF426740|SPAG16|79582|sperm associated antigen 16##CR749477|SPAG16|79582|sperm associated antigen 16##AF490390|SPAG16|79582|sperm associated antigen 16##AK310883|SPAG16|79582|sperm associated antigen 16##CR457359|SPAG16|79582|sperm associated antigen 16##AL832962|SPAG16|79582|sperm associated antigen 16##BC146903|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146911|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146931|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC146935|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##BC171841|VWC2L|402117|von Willebrand factor C domain containing protein 2-like##NM_001080500|VWC2L|402117|von Willebrand factor C domain containing protein 2-like	0.0	
chr2	230750134	230750279	reg1044140.p2	3.376	+	AF442487 TSC_hg19_v1_chr2_-_230579208 AK289553 AY358891 BC035009 NM_139072	-170958	-	AB075874 AK125359 TSC_hg19_v1_chr2_-_230135980 BC040164 AK096636 NM_001100818 NM_017933	-614201	-	HQ258692 CR749494 TSC_hg19_v1_chr2_-_229046343 BC104954 BC104956 BC143408 NM_001142644 NM_030623 AK127071	-1703844	-	BC113891 BC114556 TSC_hg19_v1_chr2_-_230786683 D28476 NM_004238 BC037956 AK302468	36455	-	TSC_hg19_v1_chr2_-_230786712 AK310971	36543	-	TSC_hg19_v1_chr2_+_230787218 BC017869 BC022538 NM_174899 BC033935 AK289655 AK309702	37011	+	AF442487|DNER|92737|delta/notch-like EGF repeat containing##AK289553|DNER|92737|delta/notch-like EGF repeat containing##AY358891|DNER|92737|delta/notch-like EGF repeat containing##BC035009|DNER|92737|delta/notch-like EGF repeat containing##NM_139072|DNER|92737|delta/notch-like EGF repeat containing##AB075874|PID1|55022|phosphotyrosine interaction domain containing 1##AK125359|PID1|55022|phosphotyrosine interaction domain containing 1##BC040164|PID1|55022|phosphotyrosine interaction domain containing 1##AK096636|PID1|55022|phosphotyrosine interaction domain containing 1##NM_001100818|PID1|55022|phosphotyrosine interaction domain containing 1##NM_017933|PID1|55022|phosphotyrosine interaction domain containing 1##HQ258692|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##CR749494|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104954|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC104956|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC143408|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_001142644|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##NM_030623|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##AK127071|SPHKAP|80309|SPHK1 interactor, AKAP domain containing##BC113891|TRIP12|9320|thyroid hormone receptor interactor 12##BC114556|TRIP12|9320|thyroid hormone receptor interactor 12##D28476|TRIP12|9320|thyroid hormone receptor interactor 12##NM_004238|TRIP12|9320|thyroid hormone receptor interactor 12##BC037956|TRIP12|9320|thyroid hormone receptor interactor 12##AK302468|TRIP12|9320|thyroid hormone receptor interactor 12##AK310971|TRIP12|9320|thyroid hormone receptor interactor 12##BC017869|FBXO36|130888|F-box protein 36##BC022538|FBXO36|130888|F-box protein 36##NM_174899|FBXO36|130888|F-box protein 36##BC033935|FBXO36|130888|F-box protein 36##AK289655|FBXO36|130888|F-box protein 36##AK309702|FBXO36|130888|F-box protein 36	0.0	
chr22	38595317	38595463	reg1038913.p2	3.376	+	CR456543 TSC_hg19_v1_chr22_-_38577838 AK291212 BC036742 AL080187 NM_001004426 NM_003560 AF064594 AK308308 BC051904 AK096521 AK290825 NM_001199562 AK300459	-17597	-	TSC_hg19_v1_chr22_-_38506676 AY358164 NM_025045	-88713	-	CU677367 TSC_hg19_v1_chr22_-_38506639 AK026235 BC015619	-88788	-	NM_001161572 NM_001161574 NM_012323 TSC_hg19_v1_chr22_+_38597996 AK002001 BC067751 AK300932 AJ010857	2587	+	BC015037 TSC_hg19_v1_chr22_+_38598094 AB025247	2696	+	NM_001161573	3636	+	CR456543|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK291212|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##BC036742|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AL080187|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001004426|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_003560|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AF064594|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK308308|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##BC051904|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK096521|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK290825|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##NM_001199562|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AK300459|PLA2G6|8398|phospholipase A2, group VI (cytosolic, calcium-independent)##AY358164|BAIAP2L2|80115|BAI1-associated protein 2-like 2##NM_025045|BAIAP2L2|80115|BAI1-associated protein 2-like 2##AK026235|BAIAP2L2|80115|BAI1-associated protein 2-like 2##BC015619|BAIAP2L2|80115|BAI1-associated protein 2-like 2##NM_001161572|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161574|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_012323|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK002001|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC067751|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AK300932|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AJ010857|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##BC015037|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##AB025247|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)##NM_001161573|MAFF|23764|v-maf musculoaponeurotic fibrosarcoma oncogene homolog F (avian)	0.0	
chr2	68632108	68632289	reg1040259.p2	3.376	+	TSC_hg19_v1_chr2_+_68592449 DQ893586 DQ894896 CU676266 AB528939 CR542056 CR542079	-39741	+	TSC_hg19_v1_chr2_+_68592413 NM_002664 AK313756 BC018549 X07743 AB208967	-39826	+	AK308979 TSC_hg19_v1_chr2_-_68547079 NM_001111101 NM_015463	-85098	-	BC089423 DQ904332 NM_001024680 TSC_hg19_v1_chr2_-_68694427	62212	-	TSC_hg19_v1_chr2_+_68694716 AK290841 NM_173545 AK308186 BC041144 CU691972	62566	+	AB084080 AF506287 AY089976 BC100960 EF577399 NM_138964	240755	+	DQ893586|PLEK|5341|pleckstrin##DQ894896|PLEK|5341|pleckstrin##CR542056|PLEK|5341|pleckstrin##CR542079|PLEK|5341|pleckstrin##NM_002664|PLEK|5341|pleckstrin##AK313756|PLEK|5341|pleckstrin##BC018549|PLEK|5341|pleckstrin##X07743|PLEK|5341|pleckstrin##AB208967|PLEK|5341|pleckstrin##NM_001111101|CNRIP1|25927|cannabinoid receptor interacting protein 1##NM_015463|CNRIP1|25927|cannabinoid receptor interacting protein 1##BC089423|FBXO48|554251|F-box protein 48##DQ904332|FBXO48|554251|F-box protein 48##NM_001024680|FBXO48|554251|F-box protein 48##AK290841|APLF|200558|aprataxin and PNKP like factor##NM_173545|APLF|200558|aprataxin and PNKP like factor##AK308186|APLF|200558|aprataxin and PNKP like factor##BC041144|APLF|200558|aprataxin and PNKP like factor##AB084080|PROKR1|10887|prokineticin receptor 1##AF506287|PROKR1|10887|prokineticin receptor 1##AY089976|PROKR1|10887|prokineticin receptor 1##BC100960|PROKR1|10887|prokineticin receptor 1##EF577399|PROKR1|10887|prokineticin receptor 1##NM_138964|PROKR1|10887|prokineticin receptor 1	0.0	
chr5	32276736	32276809	reg1035828.p1	3.376	+	TSC_hg19_v1_chr5_-_32174429 BC033725 AK057544 AK075156 NM_022130	-102341	-	TSC_hg19_v1_chr5_-_32174396 AK092604	-102382	-	TSC_hg19_v1_chr5_-_32174383 AK301588 BC012123 AK293368	-102403	-	AB385495 CU691208 TSC_hg19_v1_chr5_-_32313046 BC057393 AB051469 AY028703	36233	-	TSC_hg19_v1_chr5_-_32313095 AK000483 NM_001040446	36361	-	TSC_hg19_v1_chr5_-_32388605 AK295297	111848	-	BC033725|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK057544|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK075156|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##NM_022130|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK092604|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK301588|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##BC012123|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##AK293368|GOLPH3|64083|golgi phosphoprotein 3 (coat-protein)##BC057393|MTMR12|54545|myotubularin related protein 12##AB051469|MTMR12|54545|myotubularin related protein 12##AY028703|MTMR12|54545|myotubularin related protein 12##AK000483|MTMR12|54545|myotubularin related protein 12##NM_001040446|MTMR12|54545|myotubularin related protein 12##AK295297|ZFR|51663|zinc finger RNA binding protein	0.0	
chr5	60224964	60225057	reg1033433.p1	3.376	+	AB181393 BC094792 TSC_hg19_v1_chr5_-_60140097 NM_001104558 NM_024930	-84939	-	TSC_hg19_v1_chr5_-_59995963 BC019075 AF303178 AK002114 AK299242 AK300782 AK290684 NM_001145208 NM_018369	-229045	-	TSC_hg19_v1_chr5_-_59995928 AF490257	-229094	-	AB527753 BT020021 CR536563 TSC_hg19_v1_chr5_-_60240898 U28413 AK056931 AK304610 AK314511 BC009793 AK290726 AK294856 NM_000082	15860	-	TSC_hg19_v1_chr5_+_60241003 AK026051 NM_174889 AF087990 AK291296 BC001753 BC070357 BC033965 AB183433	16002	+	BC146876 BC146881 BC014242 BC047489 TSC_hg19_v1_chr5_-_60458209	233168	-	AB181393|ELOVL7|79993|ELOVL fatty acid elongase 7##BC094792|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_001104558|ELOVL7|79993|ELOVL fatty acid elongase 7##NM_024930|ELOVL7|79993|ELOVL fatty acid elongase 7##BC019075|DEPDC1B|55789|DEP domain containing 1B##AF303178|DEPDC1B|55789|DEP domain containing 1B##AK002114|DEPDC1B|55789|DEP domain containing 1B##AK299242|DEPDC1B|55789|DEP domain containing 1B##AK300782|DEPDC1B|55789|DEP domain containing 1B##AK290684|DEPDC1B|55789|DEP domain containing 1B##NM_001145208|DEPDC1B|55789|DEP domain containing 1B##NM_018369|DEPDC1B|55789|DEP domain containing 1B##AF490257|DEPDC1B|55789|DEP domain containing 1B##BT020021|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##CR536563|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##U28413|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK056931|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK304610|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK314511|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##BC009793|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK290726|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK294856|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##NM_000082|ERCC8|1161|excision repair cross-complementing rodent repair deficiency, complementation group 8##AK026051|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##NM_174889|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AF087990|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AK291296|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC001753|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC070357|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC033965|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##AB183433|NDUFAF2|91942|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 2##BC146876|C5orf43|643155|chromosome 5 open reading frame 43##BC146881|C5orf43|643155|chromosome 5 open reading frame 43##BC014242|C5orf43|643155|chromosome 5 open reading frame 43##BC047489|C5orf43|643155|chromosome 5 open reading frame 43	0.0	
chr6	22271253	22271433	reg1028203.p1	3.376	+	AK300802 AK026189 TSC_hg19_v1_chr6_+_21666674	-604684	+	TSC_hg19_v1_chr6_+_21593981 NM_003107 AF070669 AF124147 BC072668 X70683 BC021970 AB385573 EU446655	-676971	+	TSC_hg19_v1_chr6_+_20534737 AK128546 AK309457 NM_017774 AK291735 AK310219 BC064145 AK000349 BC121020 BC121021	-1736620	+	BC015850 NM_000948	26386	-	X54394 X54393 GQ305133 M58594 NM_001163558	31704	-	TSC_hg19_v1_chr6_+_22569661 NM_138574 AK302110 AK056824	298382	+	AK300802|LINC00340|401237|long intergenic non-protein coding RNA 340##AK026189|LINC00340|401237|long intergenic non-protein coding RNA 340##NM_003107|SOX4|6659|SRY (sex determining region Y)-box 4##AF070669|SOX4|6659|SRY (sex determining region Y)-box 4##AF124147|SOX4|6659|SRY (sex determining region Y)-box 4##BC072668|SOX4|6659|SRY (sex determining region Y)-box 4##X70683|SOX4|6659|SRY (sex determining region Y)-box 4##EU446655|SOX4|6659|SRY (sex determining region Y)-box 4##AK128546|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK309457|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##NM_017774|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK291735|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK310219|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC064145|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##AK000349|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121020|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC121021|CDKAL1|54901|CDK5 regulatory subunit associated protein 1-like 1##BC015850|PRL|5617|prolactin##NM_000948|PRL|5617|prolactin##X54394|PRL|5617|prolactin##X54393|PRL|5617|prolactin##GQ305133|PRL|5617|prolactin##M58594|PRL|5617|prolactin##NM_001163558|PRL|5617|prolactin##NM_138574|HDGFL1|154150|hepatoma derived growth factor-like 1##AK056824|HDGFL1|154150|hepatoma derived growth factor-like 1	0.0	
chr7	138081216	138081342	reg1041048.p1	3.376	+	AK298421 NM_001190906 NM_001190907 NM_005989 Z28339 AK298428 BC130625 BC130627 AK289425 HQ258384	-320061	+	TSC_hg19_v1_chr7_-_137686833 NM_001253775 NM_194071	-394427	-	AK131517 TSC_hg19_v1_chr7_-_137686812	-394467	-	TSC_hg19_v1_chr7_+_138145003 AK312610 AK075306 NM_003852 NM_015905 AK302679	63713	+	AF119042 BC028689 TSC_hg19_v1_chr7_+_138145183 AB528587 AF009353	63957	+	BC036796 NM_174959	267689	-	AK298421|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190906|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001190907|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_005989|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##Z28339|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK298428|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130625|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##BC130627|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##AK289425|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##HQ258384|AKR1D1|6718|aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase)##NM_001253775|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##NM_194071|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK131517|CREB3L2|64764|cAMP responsive element binding protein 3-like 2##AK312610|TRIM24|8805|tripartite motif containing 24##AK075306|TRIM24|8805|tripartite motif containing 24##NM_003852|TRIM24|8805|tripartite motif containing 24##NM_015905|TRIM24|8805|tripartite motif containing 24##AK302679|TRIM24|8805|tripartite motif containing 24##AF119042|TRIM24|8805|tripartite motif containing 24##BC028689|TRIM24|8805|tripartite motif containing 24##AF009353|TRIM24|8805|tripartite motif containing 24##BC036796|SVOPL|136306|SVOP-like##NM_174959|SVOPL|136306|SVOP-like	0.0	
chr9	123476844	123476910	reg1039467.p1	3.376	+	TSC_hg19_v1_chr9_-_123476749 AY358370 AK295380 NM_001080497	-160	-	AB489151 BC136275 BC143732 BC143734 BC143753 BC143755 BC143760 BC143762 BC143764 TSC_hg19_v1_chr9_-_123342438 AF448860 AB046853 BC146782 BC019577 BX537421 AL833481 BX537759 AK122913 BX537708 NM_001011649 NM_018249	-134524	-	BC071702 BC065196 AF027734 BC021560 AK293649 TSC_hg19_v1_chr9_-_122131727 NM_014618	-1345219	-	AF176698 TSC_hg19_v1_chr9_-_123555558	78668	-	TSC_hg19_v1_chr9_-_123555628 BC110334 AF145024 AF193594	78744	-	BC000239 TSC_hg19_v1_chr9_-_123555670 BC018738 AK300066 AK314385 AK022484 NM_012164	78819	-	AY358370|MEGF9|1955|multiple EGF-like-domains 9##AK295380|MEGF9|1955|multiple EGF-like-domains 9##NM_001080497|MEGF9|1955|multiple EGF-like-domains 9##BC136275|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143732|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143734|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143753|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143755|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143760|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143762|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC143764|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AF448860|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AB046853|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC146782|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC019577|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537421|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AL833481|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537759|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##AK122913|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BX537708|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_001011649|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##NM_018249|CDK5RAP2|55755|CDK5 regulatory subunit associated protein 2##BC071702|DBC1|1620|deleted in bladder cancer 1##BC065196|DBC1|1620|deleted in bladder cancer 1##AF027734|DBC1|1620|deleted in bladder cancer 1##BC021560|DBC1|1620|deleted in bladder cancer 1##AK293649|DBC1|1620|deleted in bladder cancer 1##NM_014618|DBC1|1620|deleted in bladder cancer 1##AF176698|FBXW2|26190|F-box and WD repeat domain containing 2##BC110334|FBXW2|26190|F-box and WD repeat domain containing 2##AF145024|FBXW2|26190|F-box and WD repeat domain containing 2##AF193594|FBXW2|26190|F-box and WD repeat domain containing 2##BC000239|FBXW2|26190|F-box and WD repeat domain containing 2##BC018738|FBXW2|26190|F-box and WD repeat domain containing 2##AK300066|FBXW2|26190|F-box and WD repeat domain containing 2##AK314385|FBXW2|26190|F-box and WD repeat domain containing 2##AK022484|FBXW2|26190|F-box and WD repeat domain containing 2##NM_012164|FBXW2|26190|F-box and WD repeat domain containing 2	0.056183	
chr9	136458315	136458405	reg1034924.p2	3.376	+	AB528863 BC146946 BC146961 NM_001080515	-13005	-	TSC_hg19_v1_chr9_+_136399879 BC050544 NM_014694	-58435	+	AB011177 NM_001145320	-61075	+	NM_000787 Y00096 BC017174 X13255 X13256 DQ893630 EU176683 CU677847	43148	+	TSC_hg19_v1_chr9_-_136603475 AK291211 AF047004 AF047190 AJ223317 NM_001134707	145118	-	BC136363 BC136364 BC144035 AK223402 TSC_hg19_v1_chr9_-_136605067 AF095735 AF095737 AK298348 AK316494 NM_007101	146626	-	BC146946|FAM163B|642968|family with sequence similarity 163, member B##BC146961|FAM163B|642968|family with sequence similarity 163, member B##NM_001080515|FAM163B|642968|family with sequence similarity 163, member B##BC050544|ADAMTSL2|9719|ADAMTS-like 2##NM_014694|ADAMTSL2|9719|ADAMTS-like 2##AB011177|ADAMTSL2|9719|ADAMTS-like 2##NM_001145320|ADAMTSL2|9719|ADAMTS-like 2##NM_000787|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##Y00096|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##BC017174|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13255|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##X13256|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##DQ893630|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##EU176683|DBH|1621|dopamine beta-hydroxylase (dopamine beta-monooxygenase)##AK291211|SARDH|1757|sarcosine dehydrogenase##AF047004|SARDH|1757|sarcosine dehydrogenase##AF047190|SARDH|1757|sarcosine dehydrogenase##AJ223317|SARDH|1757|sarcosine dehydrogenase##NM_001134707|SARDH|1757|sarcosine dehydrogenase##BC136363|SARDH|1757|sarcosine dehydrogenase##BC136364|SARDH|1757|sarcosine dehydrogenase##BC144035|SARDH|1757|sarcosine dehydrogenase##AK223402|SARDH|1757|sarcosine dehydrogenase##AF095735|SARDH|1757|sarcosine dehydrogenase##AF095737|SARDH|1757|sarcosine dehydrogenase##AK298348|SARDH|1757|sarcosine dehydrogenase##AK316494|SARDH|1757|sarcosine dehydrogenase##NM_007101|SARDH|1757|sarcosine dehydrogenase	0.864952	CTCF.p2:-13:0.865
chr9	68696811	68696927	reg1040110.p1	3.376	+	AL136793 NM_001012419 NM_032250 BC140809 BC171793 AB462947 AM393131 BC146681	-770053	+	TSC_hg19_v1_chr9_+_66553257 BC000869 BC040170	-2143594	+	BC025967 TSC_hg19_v1_chr9_-_66494213 AB593083	-2202673	-	TSC_hg19_v1_chr9_+_68726468 AK311167	29633	+	TSC_hg19_v1_chr9_+_69065493 AK311167	368669	+	NM_001085476	505334	-	AL136793|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##NM_001012419|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##NM_032250|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC140809|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##BC171793|ANKRD20A3|441425|ankyrin repeat domain 20 family, member A3##AM393131|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC146681|ANKRD20A1|84210|ankyrin repeat domain 20 family, member A1##BC000869|MGC21881|389741|uncharacterized locus MGC21881##BC040170|MGC21881|389741|uncharacterized locus MGC21881##AB593083|LOC100132249|100132249|uncharacterized LOC100132249##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##AK311167|LOC100132352|100132352|FSHD region gene 1 pseudogene##NM_001085476|FOXD4L6|653404|forkhead box D4-like 6	0.283169	CTCF.p2:13:0.283
chr10	88730568	88730644	reg1043352.p1	3.375	+	AK097165 NM_133447	-109	+	NM_006829 TSC_hg19_v1_chr10_+_88728238 AK304688 AK312031 BC004471 D45370	-2378	+	NM_003087 AK223367 AK311652 BC014098 AK312141 AF017256 AF411524 EU019993 AF010126 DQ892334 DQ892505 DQ895719 EU176715 AB464279 CR541788 CR541790	-12236	+	TSC_hg19_v1_chr10_-_88730968 AK128041	391	-	NM_001146157 BC171878 BC171915	49444	+	AK122685 TSC_hg19_v1_chr10_-_88853845 AK294685	123229	-	AK097165|AGAP11|119385|ankyrin repeat and GTPase domain Arf GTPase activating protein 11##NM_133447|AGAP11|119385|ankyrin repeat and GTPase domain Arf GTPase activating protein 11##NM_006829|C10orf116|10974|chromosome 10 open reading frame 116##AK312031|C10orf116|10974|chromosome 10 open reading frame 116##BC004471|C10orf116|10974|chromosome 10 open reading frame 116##D45370|C10orf116|10974|chromosome 10 open reading frame 116##NM_003087|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK223367|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##BC014098|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK312141|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF017256|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF411524|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU019993|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AF010126|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892334|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ892505|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##DQ895719|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##EU176715|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541788|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##CR541790|SNCG|6623|synuclein, gamma (breast cancer-specific protein 1)##AK128041|LOC100133190|100133190|uncharacterized LOC100133190##NM_001146157|FAM25A|643161|family with sequence similarity 25, member A##BC171878|FAM25A|643161|family with sequence similarity 25, member A##BC171915|FAM25A|643161|family with sequence similarity 25, member A##AK122685|GLUD1|2746|glutamate dehydrogenase 1##AK294685|GLUD1|2746|glutamate dehydrogenase 1	0.0	
chr1	12123274	12123405	reg1040133.p2	3.375	+	TSC_hg19_v1_chr1_+_12079557 AK024020 BC008068	-43769	+	AK022500 TSC_hg19_v1_chr1_+_12079535	-43805	+	FJ618905 NM_021933	-44041	+	M83554 NM_001243 BC136400 BC171762 S75768	205	+	D86042 BC063482 NM_152942 BC073839 BC141804	62677	+	TSC_hg19_v1_chr1_+_12227051 BC011844 BC042167 M32315 NM_001066 BC052977 M55994	103722	+	AK024020|MIIP|60672|migration and invasion inhibitory protein##BC008068|MIIP|60672|migration and invasion inhibitory protein##AK022500|MIIP|60672|migration and invasion inhibitory protein##FJ618905|MIIP|60672|migration and invasion inhibitory protein##NM_021933|MIIP|60672|migration and invasion inhibitory protein##M83554|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_001243|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC136400|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC171762|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##S75768|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##D86042|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC063482|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##NM_152942|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC073839|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC141804|TNFRSF8|943|tumor necrosis factor receptor superfamily, member 8##BC011844|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC042167|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M32315|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##NM_001066|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##BC052977|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B##M55994|TNFRSF1B|7133|tumor necrosis factor receptor superfamily, member 1B	0.0	
chr1	16694519	16694699	reg1029238.p3	3.375	+	NM_001114600 NM_015609 BC023988 TSC_hg19_v1_chr1_+_16693726 BX640985 AJ295987 AB097042 AB097043 AB097046 AK297926 AK298576 AK308787 AL050028 AK316205 BC065538 AB097044 AB097045 BC010631	-938	+	TSC_hg19_v1_chr1_-_16678969 BC063864 NM_018994 AK055598 BC043410	-15661	-	TSC_hg19_v1_chr1_-_16678922 AK310671	-15691	-	AK128106 BC022039 AK311614 AY327405 NM_198546	69293	-	NM_001145277 NM_001145278 NM_018090 TSC_hg19_v1_chr1_+_16767200	72575	+	AK223344 TSC_hg19_v1_chr1_+_16767218 AK300764 AK302227 AK023545 BC018914	72616	+	NM_001114600|C1orf144|26099|chromosome 1 open reading frame 144##NM_015609|C1orf144|26099|chromosome 1 open reading frame 144##BC023988|C1orf144|26099|chromosome 1 open reading frame 144##BX640985|C1orf144|26099|chromosome 1 open reading frame 144##AJ295987|C1orf144|26099|chromosome 1 open reading frame 144##AB097042|C1orf144|26099|chromosome 1 open reading frame 144##AB097043|C1orf144|26099|chromosome 1 open reading frame 144##AB097046|C1orf144|26099|chromosome 1 open reading frame 144##AK297926|C1orf144|26099|chromosome 1 open reading frame 144##AK298576|C1orf144|26099|chromosome 1 open reading frame 144##AK308787|C1orf144|26099|chromosome 1 open reading frame 144##AL050028|C1orf144|26099|chromosome 1 open reading frame 144##AK316205|C1orf144|26099|chromosome 1 open reading frame 144##BC065538|C1orf144|26099|chromosome 1 open reading frame 144##AB097044|C1orf144|26099|chromosome 1 open reading frame 144##AB097045|C1orf144|26099|chromosome 1 open reading frame 144##BC010631|C1orf144|26099|chromosome 1 open reading frame 144##BC063864|FBXO42|54455|F-box protein 42##NM_018994|FBXO42|54455|F-box protein 42##AK055598|FBXO42|54455|F-box protein 42##BC043410|FBXO42|54455|F-box protein 42##AK310671|FBXO42|54455|F-box protein 42##AK128106|SPATA21|374955|spermatogenesis associated 21##BC022039|SPATA21|374955|spermatogenesis associated 21##AK311614|SPATA21|374955|spermatogenesis associated 21##AY327405|SPATA21|374955|spermatogenesis associated 21##NM_198546|SPATA21|374955|spermatogenesis associated 21##NM_001145277|NECAP2|55707|NECAP endocytosis associated 2##NM_001145278|NECAP2|55707|NECAP endocytosis associated 2##NM_018090|NECAP2|55707|NECAP endocytosis associated 2##AK223344|NECAP2|55707|NECAP endocytosis associated 2##AK300764|NECAP2|55707|NECAP endocytosis associated 2##AK302227|NECAP2|55707|NECAP endocytosis associated 2##AK023545|NECAP2|55707|NECAP endocytosis associated 2##BC018914|NECAP2|55707|NECAP endocytosis associated 2	0.0	
chr1	186818549	186818619	reg1035382.p1	3.375	+	NM_024420 TSC_hg19_v1_chr1_+_186798126 AK290336 M68874 M72393 AK302938 BC114340	-20496	+	AB385033 AJ634912 AY462100 CU680666 EU176282 EU176597 L15326 AY151286 M90100 BC013734 AK292167 TSC_hg19_v1_chr1_-_186649556 NM_000963	-169094	-	M33478 NM_002597	-388357	-	AK123024 AB111893 NM_199051 TSC_hg19_v1_chr1_-_190446769	3628151	-	NM_130782 AK292015 BC020632 AK057114 AK315377 AF268036 AF076642	5309019	+	AY643711 NM_001039152	5467537	+	NM_024420|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK290336|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M68874|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##M72393|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AK302938|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##BC114340|PLA2G4A|5321|phospholipase A2, group IVA (cytosolic, calcium-dependent)##AJ634912|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY462100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176282|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##EU176597|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##L15326|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AY151286|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M90100|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##BC013734|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##AK292167|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##NM_000963|PTGS2|5743|prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)##M33478|PDC|5132|phosducin##NM_002597|PDC|5132|phosducin##AK123024|FAM5C|339479|family with sequence similarity 5, member C##AB111893|FAM5C|339479|family with sequence similarity 5, member C##NM_199051|FAM5C|339479|family with sequence similarity 5, member C##NM_130782|RGS18|64407|regulator of G-protein signaling 18##AK292015|RGS18|64407|regulator of G-protein signaling 18##BC020632|RGS18|64407|regulator of G-protein signaling 18##AK057114|RGS18|64407|regulator of G-protein signaling 18##AK315377|RGS18|64407|regulator of G-protein signaling 18##AF268036|RGS18|64407|regulator of G-protein signaling 18##AF076642|RGS18|64407|regulator of G-protein signaling 18##AY643711|RGS21|431704|regulator of G-protein signaling 21##NM_001039152|RGS21|431704|regulator of G-protein signaling 21	0.0	
chr12	215563	215668	reg1033317.p2	3.375	+	AK091953 AX747275 NM_015232	-29074	+	TSC_hg19_v1_chr12_+_175945 BC024764 NM_001170738	-39655	+	None	None	None	NM_003044 BC036838 BC026339 NM_001122847	107122	-	AK307167 AK313690 NM_001122848 NM_001206931	107697	-	AK313511 AF462445 AK295904 AK296127 AK296209 BC020867 BC022392 NM_001190997 NM_001243392 NM_016615	156401	-	AK091953|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_015232|IQSEC3|440073|IQ motif and Sec7 domain 3##BC024764|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_001170738|IQSEC3|440073|IQ motif and Sec7 domain 3##NM_003044|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC036838|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##BC026339|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001122847|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK307167|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK313690|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001122848|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##NM_001206931|SLC6A12|6539|solute carrier family 6 (neurotransmitter transporter, betaine/GABA), member 12##AK313511|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AF462445|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK295904|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK296127|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##AK296209|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##BC020867|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##BC022392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_001190997|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_001243392|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13##NM_016615|SLC6A13|6540|solute carrier family 6 (neurotransmitter transporter, GABA), member 13	0.139633	
chr1	2629211	2629324	reg1034828.p2	3.375	+	AK093058 AX747891 NM_033467 TSC_hg19_v1_chr1_-_2564497	-64802	-	TSC_hg19_v1_chr1_+_2518534 AK094901	-110753	+	TSC_hg19_v1_chr1_+_2518261 NM_001195736 NM_001195737 NM_001195738 NM_001195740 NM_001195741 NM_152371 AK303504 AK291908 AK298926 AK075273 AF425266 BC022547 AK057027 AK308034 AK316243	-111079	+	NM_001242672	76962	-	NM_080431 AK058153 AK314500 BC029499	308788	+	TSC_hg19_v1_chr1_+_2985766 NM_022114 NM_199454 AF294278 AB078876 AB051462 BC161614 BC110593 AB385494	356509	+	AK093058|MMEL1|79258|membrane metallo-endopeptidase-like 1##NM_033467|MMEL1|79258|membrane metallo-endopeptidase-like 1##AK094901|FAM213B|127281|family with sequence similarity 213, member B##NM_001195736|FAM213B|127281|family with sequence similarity 213, member B##NM_001195737|FAM213B|127281|family with sequence similarity 213, member B##NM_001195738|FAM213B|127281|family with sequence similarity 213, member B##NM_001195740|FAM213B|127281|family with sequence similarity 213, member B##NM_001195741|FAM213B|127281|family with sequence similarity 213, member B##NM_152371|FAM213B|127281|family with sequence similarity 213, member B##AK303504|FAM213B|127281|family with sequence similarity 213, member B##AK291908|FAM213B|127281|family with sequence similarity 213, member B##AK298926|FAM213B|127281|family with sequence similarity 213, member B##AK075273|FAM213B|127281|family with sequence similarity 213, member B##AF425266|FAM213B|127281|family with sequence similarity 213, member B##BC022547|FAM213B|127281|family with sequence similarity 213, member B##AK057027|FAM213B|127281|family with sequence similarity 213, member B##AK308034|FAM213B|127281|family with sequence similarity 213, member B##AK316243|FAM213B|127281|family with sequence similarity 213, member B##NM_001242672|TTC34|100287898|tetratricopeptide repeat domain 34##NM_080431|ACTRT2|140625|actin-related protein T2##AK058153|ACTRT2|140625|actin-related protein T2##AK314500|ACTRT2|140625|actin-related protein T2##BC029499|ACTRT2|140625|actin-related protein T2##NM_022114|PRDM16|63976|PR domain containing 16##NM_199454|PRDM16|63976|PR domain containing 16##AF294278|PRDM16|63976|PR domain containing 16##AB078876|PRDM16|63976|PR domain containing 16##AB051462|PRDM16|63976|PR domain containing 16##BC161614|PRDM16|63976|PR domain containing 16##BC110593|PRDM16|63976|PR domain containing 16	0.0	
chr14	67585091	67585204	reg1027867.p2	3.375	+	AJ272343 TSC_hg19_v1_chr14_+_66975224 AK294532 AK297447 BC030016 DQ892463 DQ895675 AB385462 AJ272033	-609922	+	TSC_hg19_v1_chr14_+_66974870 AK315569	-610278	+	TSC_hg19_v1_chr14_+_66974859 AK025169	-610294	+	NM_173526 AK093449 AX748134 AK302154 BC037380 BC050401	70996	+	BC095485 TSC_hg19_v1_chr14_+_67708117 NM_022474 AK291240 AK098373 BC053366 AL832326 BC129933 AL832578 BC037966 AK057160	123016	+	CU692980 TSC_hg19_v1_chr14_-_67826522 BC001411 AF104629 BC031002 AK315784 AK001155 AF145316 AF077614 AF100741 BC025373 NM_015994	241419	-	AJ272343|GPHN|10243|gephyrin##AK294532|GPHN|10243|gephyrin##AK297447|GPHN|10243|gephyrin##BC030016|GPHN|10243|gephyrin##DQ892463|GPHN|10243|gephyrin##DQ895675|GPHN|10243|gephyrin##AJ272033|GPHN|10243|gephyrin##AK315569|GPHN|10243|gephyrin##AK025169|GPHN|10243|gephyrin##NM_173526|FAM71D|161142|family with sequence similarity 71, member D##AK093449|FAM71D|161142|family with sequence similarity 71, member D##AK302154|FAM71D|161142|family with sequence similarity 71, member D##BC037380|FAM71D|161142|family with sequence similarity 71, member D##BC050401|FAM71D|161142|family with sequence similarity 71, member D##BC095485|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##NM_022474|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK291240|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AK098373|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC053366|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832326|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC129933|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##AL832578|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC037966|MPP5|64398|membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)##BC001411|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF104629|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC031002|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK315784|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AK001155|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF145316|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF077614|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##AF100741|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##BC025373|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D##NM_015994|ATP6V1D|51382|ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D	0.996259	CTCF.p2:-21:0.996
chr20	48429251	48429353	reg1040395.p2	3.375	+	TSC_hg19_v1_chr20_-_48330471 NM_004776	-98836	-	AB004550 TSC_hg19_v1_chr20_-_48330359	-98946	-	TSC_hg19_v1_chr20_-_48330210 AB527656 HQ258208 AF038663 BC074821 BC074873 BC104987 BC112265	-99072	-	NM_015266 TSC_hg19_v1_chr20_+_48429364 AK300318	6	+	CR749638 TSC_hg19_v1_chr20_+_48429436 AB023156 BC112213 AK295803 AK308328 AK131001 AK295665 AK310530 AK295822	116	+	AK289644 NM_001135773	100973	-	NM_004776|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AB004550|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##HQ258208|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##AF038663|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074821|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC074873|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC104987|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##BC112265|B4GALT5|9334|UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5##NM_015266|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK300318|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##CR749638|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AB023156|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##BC112213|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295803|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK308328|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK131001|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295665|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK310530|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK295822|SLC9A8|23315|solute carrier family 9 (sodium/hydrogen exchanger), member 8##AK289644|SPATA2|9825|spermatogenesis associated 2##NM_001135773|SPATA2|9825|spermatogenesis associated 2	0.019861	
chr20	49196486	49196572	reg1016562.p1	3.375	+	BC018164 TSC_hg19_v1_chr20_+_49126947 M31724 M33689 AB385151 BT006752	-69524	+	TSC_hg19_v1_chr20_+_49126921 BC015660	-69597	+	AK299830 TSC_hg19_v1_chr20_+_49126919	-69610	+	AK056792 NM_080829	56896	-	TSC_hg19_v1_chr20_-_49308074 AK124347	111548	-	TSC_hg19_v1_chr20_+_49348057 BC060847 NM_032521	151540	+	BC018164|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M31724|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##M33689|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BT006752|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##BC015660|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK299830|PTPN1|5770|protein tyrosine phosphatase, non-receptor type 1##AK056792|FAM65C|140876|family with sequence similarity 65, member C##NM_080829|FAM65C|140876|family with sequence similarity 65, member C##BC060847|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)##NM_032521|PARD6B|84612|par-6 partitioning defective 6 homolog beta (C. elegans)	0.034306	
chr21	40721714	40721878	reg1038346.p2	3.375	+	TSC_hg19_v1_chr21_-_40721011 NM_004965 BC107741	-766	-	TSC_hg19_v1_chr21_-_40720981 BC071643 BC023984 BC072672 BC070154 BC000075 AB209245 BC106080 BC070153 J02621 AK315410	-826	-	AB590110 BT007337 DQ891741 DQ894919 TSC_hg19_v1_chr21_-_40720926	-907	-	NM_004627 TSC_hg19_v1_chr21_+_40752235	30427	+	TSC_hg19_v1_chr21_+_40752257 AK299245 AK297186 AK293113	30453	+	TSC_hg19_v1_chr21_+_40752270 Y12478 AK293866 BC012415	30477	+	NM_004965|HMGN1|3150|high mobility group nucleosome binding domain 1##BC107741|HMGN1|3150|high mobility group nucleosome binding domain 1##BC071643|HMGN1|3150|high mobility group nucleosome binding domain 1##BC023984|HMGN1|3150|high mobility group nucleosome binding domain 1##BC072672|HMGN1|3150|high mobility group nucleosome binding domain 1##BC070154|HMGN1|3150|high mobility group nucleosome binding domain 1##BC000075|HMGN1|3150|high mobility group nucleosome binding domain 1##AB209245|HMGN1|3150|high mobility group nucleosome binding domain 1##BC106080|HMGN1|3150|high mobility group nucleosome binding domain 1##BC070153|HMGN1|3150|high mobility group nucleosome binding domain 1##J02621|HMGN1|3150|high mobility group nucleosome binding domain 1##AK315410|HMGN1|3150|high mobility group nucleosome binding domain 1##BT007337|HMGN1|3150|high mobility group nucleosome binding domain 1##DQ891741|HMGN1|3150|high mobility group nucleosome binding domain 1##DQ894919|HMGN1|3150|high mobility group nucleosome binding domain 1##NM_004627|WRB|7485|tryptophan rich basic protein##AK299245|WRB|7485|tryptophan rich basic protein##AK297186|WRB|7485|tryptophan rich basic protein##AK293113|WRB|7485|tryptophan rich basic protein##Y12478|WRB|7485|tryptophan rich basic protein##AK293866|WRB|7485|tryptophan rich basic protein##BC012415|WRB|7485|tryptophan rich basic protein	0.0	
chr5	45696477	45696583	reg1032418.p1	3.375	+	AF488549 NM_021072	-311	-	AF064876 TSC_hg19_v1_chr5_-_45695947	-639	-	TSC_hg19_v1_chr5_+_44809056 AF146192 AL355715 NM_016640 AK222704 BC007735 AK222894 AL136706 AK074777 CU675783 BC002460	-887503	+	AK300860 TSC_hg19_v1_chr5_-_49737200 BC059398	4040669	-	TSC_hg19_v1_chr5_-_49737229 NM_198449	4040713	-	AK298680 AK314466 BC105789 NM_001178055	4265202	+	AF488549|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##NM_021072|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF064876|HCN1|348980|hyperpolarization activated cyclic nucleotide-gated potassium channel 1##AF146192|MRPS30|10884|mitochondrial ribosomal protein S30##AL355715|MRPS30|10884|mitochondrial ribosomal protein S30##NM_016640|MRPS30|10884|mitochondrial ribosomal protein S30##AK222704|MRPS30|10884|mitochondrial ribosomal protein S30##BC007735|MRPS30|10884|mitochondrial ribosomal protein S30##AK222894|MRPS30|10884|mitochondrial ribosomal protein S30##AL136706|MRPS30|10884|mitochondrial ribosomal protein S30##AK074777|MRPS30|10884|mitochondrial ribosomal protein S30##BC002460|MRPS30|10884|mitochondrial ribosomal protein S30##AK300860|EMB|133418|embigin##BC059398|EMB|133418|embigin##NM_198449|EMB|133418|embigin##AK298680|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##AK314466|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##BC105789|PARP8|79668|poly (ADP-ribose) polymerase family, member 8##NM_001178055|PARP8|79668|poly (ADP-ribose) polymerase family, member 8	0.992932	CTCF.p2:-10:0.993
chr5	88567844	88567932	reg1046824.p1	3.375	+	AL833268 AL833274 NM_001131005 NM_001193347	-367994	-	TSC_hg19_v1_chr5_+_88185266 AK093634	-382624	+	TSC_hg19_v1_chr5_+_88185094 AL050132	-382768	+	BT006688 CR450346 Y12473 BC093793 BC112040 TSC_hg19_v1_chr5_-_89705574 BC005383 NM_004365	1137651	-	CU691546 AK289778 AK096942 TSC_hg19_v1_chr5_-_89770234 AK128603	1202294	-	TSC_hg19_v1_chr5_-_89770480 BC038230 NM_203406	1202690	-	AL833268|MEF2C|4208|myocyte enhancer factor 2C##AL833274|MEF2C|4208|myocyte enhancer factor 2C##NM_001131005|MEF2C|4208|myocyte enhancer factor 2C##NM_001193347|MEF2C|4208|myocyte enhancer factor 2C##AK093634|RPS6|6194|ribosomal protein S6##BT006688|CETN3|1070|centrin, EF-hand protein, 3##CR450346|CETN3|1070|centrin, EF-hand protein, 3##Y12473|CETN3|1070|centrin, EF-hand protein, 3##BC093793|CETN3|1070|centrin, EF-hand protein, 3##BC112040|CETN3|1070|centrin, EF-hand protein, 3##BC005383|CETN3|1070|centrin, EF-hand protein, 3##NM_004365|CETN3|1070|centrin, EF-hand protein, 3##AK289778|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK096942|MBLAC2|153364|metallo-beta-lactamase domain containing 2##AK128603|MBLAC2|153364|metallo-beta-lactamase domain containing 2##BC038230|MBLAC2|153364|metallo-beta-lactamase domain containing 2##NM_203406|MBLAC2|153364|metallo-beta-lactamase domain containing 2	0.0	
chr6	70623387	70623476	reg1040353.p1	3.375	+	AK309023 TSC_hg19_v1_chr6_+_70577418	-46069	+	D38163 NM_001858 AK310621 BC070177 BC113362 BC113364	-46968	+	TSC_hg19_v1_chr6_-_70506885 BC047073 NM_018368	-116486	-	X54413 BC008620 BC063646 NM_078485	369401	-	X54412 BC015409 TSC_hg19_v1_chr6_-_71012827 NM_001851	389369	-	TSC_hg19_v1_chr6_+_71123122 NM_001105531 NM_020819	499682	+	D38163|COL19A1|1310|collagen, type XIX, alpha 1##NM_001858|COL19A1|1310|collagen, type XIX, alpha 1##AK310621|COL19A1|1310|collagen, type XIX, alpha 1##BC070177|COL19A1|1310|collagen, type XIX, alpha 1##BC113362|COL19A1|1310|collagen, type XIX, alpha 1##BC113364|COL19A1|1310|collagen, type XIX, alpha 1##BC047073|LMBRD1|55788|LMBR1 domain containing 1##NM_018368|LMBRD1|55788|LMBR1 domain containing 1##X54413|COL9A1|1297|collagen, type IX, alpha 1##BC008620|COL9A1|1297|collagen, type IX, alpha 1##BC063646|COL9A1|1297|collagen, type IX, alpha 1##NM_078485|COL9A1|1297|collagen, type IX, alpha 1##X54412|COL9A1|1297|collagen, type IX, alpha 1##BC015409|COL9A1|1297|collagen, type IX, alpha 1##NM_001851|COL9A1|1297|collagen, type IX, alpha 1##NM_001105531|FAM135A|57579|family with sequence similarity 135, member A##NM_020819|FAM135A|57579|family with sequence similarity 135, member A	0.0	
chr8	103675295	103675383	reg1040424.p2	3.375	+	TSC_hg19_v1_chr8_-_103667952 AK312894 U21847 BC095399 NM_005655	-7407	-	BC011538 NM_001032282 S81439	-9247	-	NM_024410 AK315276 BC104456 BC104457	-111478	+	TSC_hg19_v1_chr8_-_103876358 AK095493 D88674 BC013420 BC019279	201020	-	TSC_hg19_v1_chr8_-_103876392 BC042404 NM_015878 NM_148174	201056	-	TSC_hg19_v1_chr8_+_104033282 NM_001695 AK298617 BX648079	357928	+	AK312894|KLF10|7071|Kruppel-like factor 10##U21847|KLF10|7071|Kruppel-like factor 10##BC095399|KLF10|7071|Kruppel-like factor 10##NM_005655|KLF10|7071|Kruppel-like factor 10##BC011538|KLF10|7071|Kruppel-like factor 10##NM_001032282|KLF10|7071|Kruppel-like factor 10##S81439|KLF10|7071|Kruppel-like factor 10##NM_024410|ODF1|4956|outer dense fiber of sperm tails 1##AK315276|ODF1|4956|outer dense fiber of sperm tails 1##BC104456|ODF1|4956|outer dense fiber of sperm tails 1##BC104457|ODF1|4956|outer dense fiber of sperm tails 1##AK095493|AZIN1|51582|antizyme inhibitor 1##D88674|AZIN1|51582|antizyme inhibitor 1##BC013420|AZIN1|51582|antizyme inhibitor 1##BC019279|AZIN1|51582|antizyme inhibitor 1##BC042404|AZIN1|51582|antizyme inhibitor 1##NM_015878|AZIN1|51582|antizyme inhibitor 1##NM_148174|AZIN1|51582|antizyme inhibitor 1##NM_001695|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##AK298617|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1##BX648079|ATP6V1C1|528|ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1	0.0	
chr12	16011432	16011562	reg1036040.p1	3.374	+	TSC_hg19_v1_chr12_-_15942350 AK304860 NM_004447	-69068	-	TSC_hg19_v1_chr12_-_15942323 U12535 BC005836 AK291777 BC030010	-69265	-	TSC_hg19_v1_chr12_-_15865848 AK292931	-145633	-	NM_007178 TSC_hg19_v1_chr12_+_16035321 AK074607 AK315891 AK297942 BC062306 AF161496 AB024327 AL136691 AK312295	23833	+	AJ010025 BC000162 TSC_hg19_v1_chr12_+_16035508 U56430 AY049776 DQ890951 DQ894113 AB385074 CU674068 BT020044 BT020045	24071	+	BC041328 NM_015954 TSC_hg19_v1_chr12_+_16064223	52669	+	AK304860|EPS8|2059|epidermal growth factor receptor pathway substrate 8##NM_004447|EPS8|2059|epidermal growth factor receptor pathway substrate 8##U12535|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC005836|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK291777|EPS8|2059|epidermal growth factor receptor pathway substrate 8##BC030010|EPS8|2059|epidermal growth factor receptor pathway substrate 8##AK292931|EPS8|2059|epidermal growth factor receptor pathway substrate 8##NM_007178|STRAP|11171|serine/threonine kinase receptor associated protein##AK315891|STRAP|11171|serine/threonine kinase receptor associated protein##AK297942|STRAP|11171|serine/threonine kinase receptor associated protein##BC062306|STRAP|11171|serine/threonine kinase receptor associated protein##AF161496|STRAP|11171|serine/threonine kinase receptor associated protein##AB024327|STRAP|11171|serine/threonine kinase receptor associated protein##AL136691|STRAP|11171|serine/threonine kinase receptor associated protein##AK312295|STRAP|11171|serine/threonine kinase receptor associated protein##AJ010025|STRAP|11171|serine/threonine kinase receptor associated protein##BC000162|STRAP|11171|serine/threonine kinase receptor associated protein##AY049776|STRAP|11171|serine/threonine kinase receptor associated protein##DQ890951|STRAP|11171|serine/threonine kinase receptor associated protein##DQ894113|STRAP|11171|serine/threonine kinase receptor associated protein##BT020044|STRAP|11171|serine/threonine kinase receptor associated protein##BT020045|STRAP|11171|serine/threonine kinase receptor associated protein##BC041328|DERA|51071|deoxyribose-phosphate aldolase (putative)##NM_015954|DERA|51071|deoxyribose-phosphate aldolase (putative)	0.871149	CTCF.p2:30:0.871
chr13	24735118	24735194	reg1038973.p2	3.374	+	TSC_hg19_v1_chr13_+_24734858 AK092754 AX747708 NM_001166271 NM_153023 AK055770	-261	+	TSC_hg19_v1_chr13_+_24553943 BX648244 BC043582	-181223	+	BX648445 TSC_hg19_v1_chr13_+_24553892	-181291	+	AK299981 AK301149 TSC_hg19_v1_chr13_+_24825840	90679	+	TSC_hg19_v1_chr13_+_24844889 AK297394 AK298717 AK123031	109742	+	BC040438 NM_178540 AY358145	148561	+	AK092754|SPATA13|221178|spermatogenesis associated 13##NM_001166271|SPATA13|221178|spermatogenesis associated 13##NM_153023|SPATA13|221178|spermatogenesis associated 13##AK055770|SPATA13|221178|spermatogenesis associated 13##BX648244|SPATA13|221178|spermatogenesis associated 13##AK299981|SPATA13|221178|spermatogenesis associated 13##AK301149|SPATA13|221178|spermatogenesis associated 13##AK297394|SPATA13|221178|spermatogenesis associated 13##AK298717|SPATA13|221178|spermatogenesis associated 13##AK123031|SPATA13|221178|spermatogenesis associated 13##BC040438|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##NM_178540|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9##AY358145|C1QTNF9|338872|C1q and tumor necrosis factor related protein 9	0.0	
chr14	30824736	30824917	reg1040907.p1	3.374	+	TSC_hg19_v1_chr14_-_30396811 AK314170 NM_002742	-427972	-	TSC_hg19_v1_chr14_+_29241992 BX248251	-1582831	+	BC040960 X74144 TSC_hg19_v1_chr14_+_29236942	-1587913	+	NM_017769 TSC_hg19_v1_chr14_+_31028363 AK000340 AK093536 AK225346 AK295571 AK296872 BC008436 AB037754 BC000973	203534	+	AK308587 TSC_hg19_v1_chr14_+_31091524 AF319958 NM_016106 NM_182835 AB020724 AK290410 AK297873 AK301406 AK307960 AK316212 AK299222	266698	+	TSC_hg19_v1_chr14_+_31091535 AK298622 AK222820 AB463243 BC017734 AF086916 CU676040 AF110646 AF092139	266718	+	AK314170|PRKD1|5587|protein kinase D1##NM_002742|PRKD1|5587|protein kinase D1##BX248251|C14orf23|387978|chromosome 14 open reading frame 23##BC040960|FOXG1|2290|forkhead box G1##X74144|FOXG1|2290|forkhead box G1##NM_017769|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK000340|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK093536|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK225346|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK295571|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK296872|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC008436|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AB037754|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##BC000973|G2E3|55632|G2/M-phase specific E3 ubiquitin protein ligase##AK308587|SCFD1|23256|sec1 family domain containing 1##AF319958|SCFD1|23256|sec1 family domain containing 1##NM_016106|SCFD1|23256|sec1 family domain containing 1##NM_182835|SCFD1|23256|sec1 family domain containing 1##AB020724|SCFD1|23256|sec1 family domain containing 1##AK290410|SCFD1|23256|sec1 family domain containing 1##AK297873|SCFD1|23256|sec1 family domain containing 1##AK301406|SCFD1|23256|sec1 family domain containing 1##AK307960|SCFD1|23256|sec1 family domain containing 1##AK316212|SCFD1|23256|sec1 family domain containing 1##AK299222|SCFD1|23256|sec1 family domain containing 1##AK298622|SCFD1|23256|sec1 family domain containing 1##AK222820|SCFD1|23256|sec1 family domain containing 1##BC017734|SCFD1|23256|sec1 family domain containing 1##AF086916|SCFD1|23256|sec1 family domain containing 1##AF110646|SCFD1|23256|sec1 family domain containing 1##AF092139|SCFD1|23256|sec1 family domain containing 1	0.0	
chr20	57502921	57503030	reg1040167.p1	3.374	+	TSC_hg19_v1_chr20_+_57470682 M77026	-32311	+	TSC_hg19_v1_chr20_+_57470201 AK093534	-32750	+	TSC_hg19_v1_chr20_+_57466745 X04409 AB385065 EU832170 EU832264 CU678144 CU679149 X07036 AF064092 AF088184 AF493897 AF493898 BC066923 BT009905 M14631 AK315860 BC022875	-36147	+	TSC_hg19_v1_chr20_+_57556319 AK293410 AK304310 NM_198976	53332	+	TSC_hg19_v1_chr20_+_57556329 BC014952 BX647417 AJ238379 AF161479 AB528731 AK023927 AK023310 AK001316	53374	+	AF009923 BT019915 CU692072 AM392668 AB528116 AF073890 AF136273 BC025419 BC042168 TSC_hg19_v1_chr20_-_57582302	79252	-	M77026|GNAS|2778|GNAS complex locus##AK093534|GNAS|2778|GNAS complex locus##X04409|GNAS|2778|GNAS complex locus##EU832170|GNAS|2778|GNAS complex locus##EU832264|GNAS|2778|GNAS complex locus##X07036|GNAS|2778|GNAS complex locus##AF064092|GNAS|2778|GNAS complex locus##AF088184|GNAS|2778|GNAS complex locus##AF493897|GNAS|2778|GNAS complex locus##AF493898|GNAS|2778|GNAS complex locus##BC066923|GNAS|2778|GNAS complex locus##BT009905|GNAS|2778|GNAS complex locus##M14631|GNAS|2778|GNAS complex locus##AK315860|GNAS|2778|GNAS complex locus##BC022875|GNAS|2778|GNAS complex locus##AK293410|TH1L|51497|TH1-like (Drosophila)##AK304310|TH1L|51497|TH1-like (Drosophila)##NM_198976|TH1L|51497|TH1-like (Drosophila)##BC014952|TH1L|51497|TH1-like (Drosophila)##BX647417|TH1L|51497|TH1-like (Drosophila)##AJ238379|TH1L|51497|TH1-like (Drosophila)##AF161479|TH1L|51497|TH1-like (Drosophila)##AK023927|TH1L|51497|TH1-like (Drosophila)##AK023310|TH1L|51497|TH1-like (Drosophila)##AK001316|TH1L|51497|TH1-like (Drosophila)##AF009923|CTSZ|1522|cathepsin Z##BT019915|CTSZ|1522|cathepsin Z##AM392668|CTSZ|1522|cathepsin Z##AF073890|CTSZ|1522|cathepsin Z##AF136273|CTSZ|1522|cathepsin Z##BC025419|CTSZ|1522|cathepsin Z##BC042168|CTSZ|1522|cathepsin Z	0.018807	
chr2	130939405	130939585	reg1022598.p1	3.374	+	TSC_hg19_v1_chr2_-_130939163 BC064947 AK000304 AK303519 AK303427 AK301576 AK056501 AK298609 EU367941 AK299185 AK297257 NM_001171083 NM_017751 NM_017951	-258	-	TSC_hg19_v1_chr2_-_130929945 BC040941	-9494	-	CU688330 AK297246 AK057609 NM_207310 BC067771 AK302804	-36884	-	NM_025029	5	+	TSC_hg19_v1_chr2_+_130939768 BC066296	267	+	TSC_hg19_v1_chr2_+_130939834 HQ258550 BC014255	324	+	BC064947|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK000304|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK303519|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK303427|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK301576|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK056501|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK298609|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##EU367941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK299185|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK297257|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_001171083|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_017751|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##NM_017951|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##BC040941|SMPD4|55627|sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)##AK297246|CCDC74B|91409|coiled-coil domain containing 74B##AK057609|CCDC74B|91409|coiled-coil domain containing 74B##NM_207310|CCDC74B|91409|coiled-coil domain containing 74B##BC067771|CCDC74B|91409|coiled-coil domain containing 74B##AK302804|CCDC74B|91409|coiled-coil domain containing 74B##NM_025029|MZT2B|80097|mitotic spindle organizing protein 2B##BC066296|MZT2B|80097|mitotic spindle organizing protein 2B##BC014255|MZT2B|80097|mitotic spindle organizing protein 2B	0.39301	CTCF.p2:-30:0.393
chr2	182213185	182213350	reg1036791.p2	3.374	+	TSC_hg19_v1_chr2_+_181845809 AK314145	-367440	+	AF085362 BC003554 AB017644 TSC_hg19_v1_chr2_+_181845681	-367624	+	TSC_hg19_v1_chr2_+_181845369 BC092407	-367897	+	NM_000885	108351	+	BC055419 AJ504733 AJ508356 L12002 TSC_hg19_v1_chr2_+_182322149 AK303478 BC016671	108783	+	TSC_hg19_v1_chr2_+_182322277 X16983 AB527164	109055	+	AK314145|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AF085362|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC003554|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##AB017644|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##BC092407|UBE2E3|10477|ubiquitin-conjugating enzyme E2E 3##NM_000885|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC055419|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ504733|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AJ508356|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##L12002|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##AK303478|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##BC016671|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)##X16983|ITGA4|3676|integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)	0.0	
chr2	191715291	191715383	reg1009569.p1	3.374	+	TSC_hg19_v1_chr2_+_191513840 NM_005966 BC035724 AK292446	-201371	+	TSC_hg19_v1_chr2_-_191399454 NM_001142645	-315871	-	AK296987 TSC_hg19_v1_chr2_-_191399436	-315910	-	AK289747 NM_014905 TSC_hg19_v1_chr2_+_191745546	30209	+	TSC_hg19_v1_chr2_+_191745547 BC038507 AB020645 AF158555	30220	+	TSC_hg19_v1_chr2_+_191745568 AF097495 Y08264 AF327434	30247	+	NM_005966|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##BC035724|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##AK292446|NAB1|4664|NGFI-A binding protein 1 (EGR1 binding protein 1)##NM_001142645|TMEM194B|100131211|transmembrane protein 194B##AK296987|TMEM194B|100131211|transmembrane protein 194B##AK289747|GLS|2744|glutaminase##NM_014905|GLS|2744|glutaminase##BC038507|GLS|2744|glutaminase##AB020645|GLS|2744|glutaminase##AF158555|GLS|2744|glutaminase##AF097495|GLS|2744|glutaminase##Y08264|GLS|2744|glutaminase##AF327434|GLS|2744|glutaminase	0.998686	
chr4	76098016	76098173	reg1040830.p1	3.374	+	TSC_hg19_v1_chr4_+_75858325 NM_015393 AK022311 AY358777 BC013294 AL080121 AM393174 AM393589 AB528828 CU680556	-239722	+	BC011618 S55606 AB109441 NM_001729	-378311	-	BC009799 M30704 NM_001657	-617466	+	TSC_hg19_v1_chr4_-_76439504 AK309555 AK308754 AB528599 AF247041 CU689096 CU690404 GQ129342 GQ129343 GQ250944 GQ250945 GQ250946 JF691538 JF691539 AB209072 AF255666 AY888047 GU937000 AF305424	341422	-	TSC_hg19_v1_chr4_-_76439614 AK091501 AX747022 BC031057 BC047393 NM_001008925 NM_001009922 NM_015436	341520	-	NM_144721 TSC_hg19_v1_chr4_+_76439670 AK310575 AK056959 AK303658 AK308914 AK309187 AL833350 BX647579 AK313765	341597	+	NM_015393|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AK022311|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AY358777|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC013294|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AL080121|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393174|PARM1|25849|prostate androgen-regulated mucin-like protein 1##AM393589|PARM1|25849|prostate androgen-regulated mucin-like protein 1##BC011618|BTC|685|betacellulin##S55606|BTC|685|betacellulin##AB109441|BTC|685|betacellulin##NM_001729|BTC|685|betacellulin##BC009799|AREG|374|amphiregulin##M30704|AREG|374|amphiregulin##NM_001657|AREG|374|amphiregulin##AK309555|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK308754|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF247041|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129342|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ129343|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250944|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250945|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GQ250946|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AB209072|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF255666|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AY888047|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##GU937000|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AF305424|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##AK091501|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC031057|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##BC047393|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001008925|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_001009922|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_015436|RCHY1|25898|ring finger and CHY zinc finger domain containing 1##NM_144721|THAP6|152815|THAP domain containing 6##AK310575|THAP6|152815|THAP domain containing 6##AK056959|THAP6|152815|THAP domain containing 6##AK303658|THAP6|152815|THAP domain containing 6##AK308914|THAP6|152815|THAP domain containing 6##AK309187|THAP6|152815|THAP domain containing 6##AL833350|THAP6|152815|THAP domain containing 6##BX647579|THAP6|152815|THAP domain containing 6##AK313765|THAP6|152815|THAP domain containing 6	0.0	
chr9	71293465	71293558	reg1046907.p1	3.374	+	DQ890797 DQ893952 BC029780 NM_153237 TSC_hg19_v1_chr9_-_71155800	-137746	-	BC033073 NM_021965	-321697	+	AY344641 AY344642 NM_199135 BC137365 BC137366 EU446685 BC103887	-375687	+	TSC_hg19_v1_chr9_+_71320206 AK295587 AK292734 NM_003558	26865	+	TSC_hg19_v1_chr9_+_71394980 NM_138333 BC013062 AK126379 AK304099	101440	+	CU680482 TSC_hg19_v1_chr9_+_71395147	101605	+	DQ890797|C9orf71|169693|chromosome 9 open reading frame 71##DQ893952|C9orf71|169693|chromosome 9 open reading frame 71##BC029780|C9orf71|169693|chromosome 9 open reading frame 71##NM_153237|C9orf71|169693|chromosome 9 open reading frame 71##BC033073|PGM5|5239|phosphoglucomutase 5##NM_021965|PGM5|5239|phosphoglucomutase 5##AY344641|FOXD4L3|286380|forkhead box D4-like 3##AY344642|FOXD4L3|286380|forkhead box D4-like 3##NM_199135|FOXD4L3|286380|forkhead box D4-like 3##BC137365|FOXD4L6|653404|forkhead box D4-like 6##BC137366|FOXD4L6|653404|forkhead box D4-like 6##EU446685|FOXD4L6|653404|forkhead box D4-like 6##BC103887|FOXD4L6|653404|forkhead box D4-like 6##AK295587|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##AK292734|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_003558|PIP5K1B|8395|phosphatidylinositol-4-phosphate 5-kinase, type I, beta##NM_138333|FAM122A|116224|family with sequence similarity 122A##BC013062|FAM122A|116224|family with sequence similarity 122A##AK126379|FAM122A|116224|family with sequence similarity 122A	0.0	
chrX	40943603	40943767	reg1033122.p1	3.374	+	TSC_hg19_v1_chrX_-_40595139 AK308871	-348556	-	TSC_hg19_v1_chrX_-_40594999 AK293070	-348705	-	TSC_hg19_v1_chrX_-_40594795 AB006651 AF304448 BC098377 NM_004229	-348897	-	TSC_hg19_v1_chrX_+_40944880 NM_001039590 NM_001039591	1187	+	AF000982 AF000983 NM_001193416 NM_001193417 NM_001356	248965	+	TSC_hg19_v1_chrX_+_41193414 AK291153 AK296906 AK297159 AK304689 AK310891 BC055083 AF086430 BC007668 AF061337 BC011819 AB208983 AB384807 AB451220 AB451343	249772	+	AK308871|MED14|9282|mediator complex subunit 14##AK293070|MED14|9282|mediator complex subunit 14##AB006651|MED14|9282|mediator complex subunit 14##AF304448|MED14|9282|mediator complex subunit 14##BC098377|MED14|9282|mediator complex subunit 14##NM_004229|MED14|9282|mediator complex subunit 14##NM_001039590|USP9X|8239|ubiquitin specific peptidase 9, X-linked##NM_001039591|USP9X|8239|ubiquitin specific peptidase 9, X-linked##AF000982|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF000983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193416|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001193417|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##NM_001356|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK291153|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK296906|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK297159|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK304689|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AK310891|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC055083|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF086430|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC007668|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AF061337|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##BC011819|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB208983|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451220|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked##AB451343|DDX3X|1654|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked	0.0	
chr10	126451350	126451416	reg1035452.p2	3.373	+	TSC_hg19_v1_chr10_-_126432908 NM_014661	-18472	-	TSC_hg19_v1_chr10_-_126432823 BC031654	-18567	-	D50930 TSC_hg19_v1_chr10_-_126432660	-18739	-	TSC_hg19_v1_chr10_-_126480455 CU693146 AL832292 AF318345 BC026167 NM_212554	29021	-	NM_032182 TSC_hg19_v1_chr10_+_126490387 AK296677 D63877 BC008999	38989	+	NM_017580	179308	+	NM_014661|FAM53B|9679|family with sequence similarity 53, member B##BC031654|FAM53B|9679|family with sequence similarity 53, member B##D50930|FAM53B|9679|family with sequence similarity 53, member B##AL832292|METTL10|399818|methyltransferase like 10##AF318345|METTL10|399818|methyltransferase like 10##BC026167|METTL10|399818|methyltransferase like 10##NM_212554|METTL10|399818|methyltransferase like 10##NM_032182|FAM175B|23172|family with sequence similarity 175, member B##AK296677|FAM175B|23172|family with sequence similarity 175, member B##D63877|FAM175B|23172|family with sequence similarity 175, member B##BC008999|FAM175B|23172|family with sequence similarity 175, member B##NM_017580|ZRANB1|54764|zinc finger, RAN-binding domain containing 1	0.0	
chr11	318457	318619	reg1035455.p1	3.373	+	J04164 NM_003641 TSC_hg19_v1_chr11_+_314039 AK290480 BC000897 X84958 AB590121 BT007173 DQ891094 DQ894276	-4527	+	NM_006435 TSC_hg19_v1_chr11_+_308199 BC009696 DQ891667 DQ894615 BT009859 CR456894 CR541874 X02490	-10368	+	BC150562 BC150563 NM_001025295	-19017	-	TSC_hg19_v1_chr11_-_320849 BT006892 AM392723 AM393694 DQ891098 DQ894280 BC070243 BC008417 AK292173 BC022439 BC006794 NM_021034	2306	-	TSC_hg19_v1_chr11_-_320925 X57352	2449	-	TSC_hg19_v1_chr11_+_369724 NM_178537 AB089939 BC131528	51227	+	J04164|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_003641|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##AK290480|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BC000897|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##X84958|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##BT007173|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ891094|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##DQ894276|IFITM1|8519|interferon induced transmembrane protein 1 (9-27)##NM_006435|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC009696|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ891667|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##DQ894615|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BT009859|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR456894|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##CR541874|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##X02490|IFITM2|10581|interferon induced transmembrane protein 2 (1-8D)##BC150562|IFITM5|387733|interferon induced transmembrane protein 5##BC150563|IFITM5|387733|interferon induced transmembrane protein 5##NM_001025295|IFITM5|387733|interferon induced transmembrane protein 5##BT006892|IFITM3|10410|interferon induced transmembrane protein 3##AM392723|IFITM3|10410|interferon induced transmembrane protein 3##AM393694|IFITM3|10410|interferon induced transmembrane protein 3##DQ891098|IFITM3|10410|interferon induced transmembrane protein 3##DQ894280|IFITM3|10410|interferon induced transmembrane protein 3##BC070243|IFITM3|10410|interferon induced transmembrane protein 3##BC008417|IFITM3|10410|interferon induced transmembrane protein 3##AK292173|IFITM3|10410|interferon induced transmembrane protein 3##BC022439|IFITM3|10410|interferon induced transmembrane protein 3##BC006794|IFITM3|10410|interferon induced transmembrane protein 3##NM_021034|IFITM3|10410|interferon induced transmembrane protein 3##X57352|IFITM3|10410|interferon induced transmembrane protein 3##NM_178537|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##AB089939|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4##BC131528|B4GALNT4|338707|beta-1,4-N-acetyl-galactosaminyl transferase 4	0.0	
chr1	169663526	169663638	reg1036470.p1	3.373	+	M25322 AK312884 BC068533 NM_003005	-64220	-	TSC_hg19_v1_chr1_-_169555717 AK291613 AK300469 NM_000130	-107843	-	AB385005 AK226079 M14335 TSC_hg19_v1_chr1_-_169555700 M16967	-107918	-	AB528958 CU676702 DQ891376 DQ894554 AJ246000 X16150 X17519 BC020758 X16070 AK225713 AK312673 M25280 TSC_hg19_v1_chr1_-_169680762 NM_000655	17177	-	BC131551 M24736 M30640 BC142677 BC142711 AK314214 NM_000450 TSC_hg19_v1_chr1_-_169703221	39617	-	AL035369 NM_033418 AK313909	100450	-	M25322|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##AK312884|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##BC068533|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##NM_003005|SELP|6403|selectin P (granule membrane protein 140kDa, antigen CD62)##AK291613|F5|2153|coagulation factor V (proaccelerin, labile factor)##AK300469|F5|2153|coagulation factor V (proaccelerin, labile factor)##NM_000130|F5|2153|coagulation factor V (proaccelerin, labile factor)##AK226079|F5|2153|coagulation factor V (proaccelerin, labile factor)##M14335|F5|2153|coagulation factor V (proaccelerin, labile factor)##M16967|F5|2153|coagulation factor V (proaccelerin, labile factor)##DQ891376|SELL|6402|selectin L##DQ894554|SELL|6402|selectin L##AJ246000|SELL|6402|selectin L##X16150|SELL|6402|selectin L##X17519|SELL|6402|selectin L##BC020758|SELL|6402|selectin L##X16070|SELL|6402|selectin L##AK225713|SELL|6402|selectin L##AK312673|SELL|6402|selectin L##M25280|SELL|6402|selectin L##NM_000655|SELL|6402|selectin L##BC131551|SELE|6401|selectin E##M24736|SELE|6401|selectin E##M30640|SELE|6401|selectin E##BC142677|SELE|6401|selectin E##BC142711|SELE|6401|selectin E##AK314214|SELE|6401|selectin E##NM_000450|SELE|6401|selectin E##AL035369|METTL18|92342|methyltransferase like 18##NM_033418|METTL18|92342|methyltransferase like 18##AK313909|METTL18|92342|methyltransferase like 18	0.997493	CTCF.p2:0:0.997
chr11	82867594	82867671	reg1037958.p2	3.373	+	BC031316 TSC_hg19_v1_chr11_+_82783118	-84514	+	BC014213 NM_014488 TSC_hg19_v1_chr11_-_82782897 BX641138	-84735	-	AK312323 TSC_hg19_v1_chr11_-_82782872	-84759	-	NM_015885 TSC_hg19_v1_chr11_+_82868196 AK302606 AF046935 AK025103 AB020631 BC146778 BC110432 BC065384	773	+	AK311356 TSC_hg19_v1_chr11_-_82904700	37070	-	TSC_hg19_v1_chr11_+_82904780 DQ508934 BC045621 AK310765 EF041819	37202	+	BC031316|LOC100506233|100506233|uncharacterized LOC100506233##BC014213|RAB30|27314|RAB30, member RAS oncogene family##NM_014488|RAB30|27314|RAB30, member RAS oncogene family##BX641138|RAB30|27314|RAB30, member RAS oncogene family##AK312323|RAB30|27314|RAB30, member RAS oncogene family##NM_015885|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK302606|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AF046935|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK025103|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AB020631|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC146778|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC110432|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##BC065384|PCF11|51585|PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae)##AK311356|DKFZp547G183|55525|uncharacterized LOC55525##DQ508934|ANKRD42|338699|ankyrin repeat domain 42##BC045621|ANKRD42|338699|ankyrin repeat domain 42##AK310765|ANKRD42|338699|ankyrin repeat domain 42##EF041819|ANKRD42|338699|ankyrin repeat domain 42	0.0	
chr11	9635881	9636061	reg1012375.p3	3.373	+	AK122837 NM_001143976	-39738	+	TSC_hg19_v1_chr11_+_9595453 AB384747 EU832325 EU832410	-40504	+	BC051831 TSC_hg19_v1_chr11_+_9595437	-40538	+	TSC_hg19_v1_chr11_+_9685623 AK096859	49643	+	TSC_hg19_v1_chr11_+_9685627 NM_015055	49665	+	BC000616 TSC_hg19_v1_chr11_+_9685651 AF134894	49680	+	AK122837|WEE1|7465|WEE1 homolog (S. pombe)##NM_001143976|WEE1|7465|WEE1 homolog (S. pombe)##EU832325|WEE1|7465|WEE1 homolog (S. pombe)##EU832410|WEE1|7465|WEE1 homolog (S. pombe)##BC051831|WEE1|7465|WEE1 homolog (S. pombe)##AK096859|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##NM_015055|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##BC000616|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit##AF134894|SWAP70|23075|SWAP switching B-cell complex 70kDa subunit	0.0	
chr14	94456400	94456493	reg1043428.p1	3.373	+	TSC_hg19_v1_chr14_-_94443079 AB488462 AK057078 NM_001202429	-13370	-	AK303686 TSC_hg19_v1_chr14_-_94442905	-13538	-	AB056723 NM_016150	-32680	-	TSC_hg19_v1_chr14_+_94492685 BC009615 BC068058 NM_023112	36257	+	AK025569 TSC_hg19_v1_chr14_+_94492747	36302	+	AB209382 AF161446 AK294613 TSC_hg19_v1_chr14_-_94547557 BC096826 AL136886 BC008847 BC009406 BX537533 AK296726 AK297232 AK304504 AK025162 AF214731 NM_020414	91080	-	AB488462|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK057078|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_001202429|ASB2|51676|ankyrin repeat and SOCS box containing 2##AK303686|ASB2|51676|ankyrin repeat and SOCS box containing 2##AB056723|ASB2|51676|ankyrin repeat and SOCS box containing 2##NM_016150|ASB2|51676|ankyrin repeat and SOCS box containing 2##BC009615|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##BC068058|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##NM_023112|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##AK025569|OTUB2|78990|OTU domain, ubiquitin aldehyde binding 2##AB209382|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AF161446|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK294613|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC096826|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AL136886|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC008847|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BC009406|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##BX537533|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK296726|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK297232|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK304504|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AK025162|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##AF214731|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24##NM_020414|DDX24|57062|DEAD (Asp-Glu-Ala-Asp) box polypeptide 24	0.0	
chr15	37393578	37393710	reg1044556.p1	3.373	+	TSC_hg19_v1_chr15_-_37393466 BC050431 NM_001220482 NM_002399 BC001516 BC001844 BC007202 AK300247	-202	-	TSC_hg19_v1_chr15_-_37392751 AK056216 NM_170674 NM_170675 NM_170676 NM_170677	-1088	-	TSC_hg19_v1_chr15_-_37392322 AK226072	-1313	-	BC029221 NM_152453	833812	+	TSC_hg19_v1_chr15_+_38544515 AK091222 AX746859 BC137480 BC137481	1150751	+	TSC_hg19_v1_chr15_+_38545029 NM_152594 AY299089 BC018015	1151378	+	BC050431|MEIS2|4212|Meis homeobox 2##NM_001220482|MEIS2|4212|Meis homeobox 2##NM_002399|MEIS2|4212|Meis homeobox 2##BC001516|MEIS2|4212|Meis homeobox 2##BC001844|MEIS2|4212|Meis homeobox 2##BC007202|MEIS2|4212|Meis homeobox 2##AK300247|MEIS2|4212|Meis homeobox 2##AK056216|MEIS2|4212|Meis homeobox 2##NM_170674|MEIS2|4212|Meis homeobox 2##NM_170675|MEIS2|4212|Meis homeobox 2##NM_170676|MEIS2|4212|Meis homeobox 2##NM_170677|MEIS2|4212|Meis homeobox 2##AK226072|MEIS2|4212|Meis homeobox 2##BC029221|TMCO5A|145942|transmembrane and coiled-coil domains 5A##NM_152453|TMCO5A|145942|transmembrane and coiled-coil domains 5A##AK091222|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137480|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC137481|SPRED1|161742|sprouty-related, EVH1 domain containing 1##NM_152594|SPRED1|161742|sprouty-related, EVH1 domain containing 1##AY299089|SPRED1|161742|sprouty-related, EVH1 domain containing 1##BC018015|SPRED1|161742|sprouty-related, EVH1 domain containing 1	0.0	
chr16	57383177	57383333	reg1034663.p1	3.373	+	TSC_hg19_v1_chr16_-_57318585 AK130584 AK313910 NM_015993	-64676	-	CU678172 BC002760 TSC_hg19_v1_chr16_-_57318556 AK289599 AF137386	-64744	-	TSC_hg19_v1_chr16_+_57279154 AK075050 NM_012106 BC003087 AK311018 AK298758	-104122	+	NM_002990 AK311970 U83171 U83239 BC027952 CU693342 AB590299 DQ890922 DQ893311 DQ894072 DQ896625 EU176526	9455	+	AK222692 TSC_hg19_v1_chr16_+_57406382	23130	+	TSC_hg19_v1_chr16_+_57406401 AK223351 AK313806 U84487 U91835 BC001163 BC016164 NM_002996 AB590256 DQ890704 DQ891871 DQ893888 DQ895059 CU674588 CR457426	23184	+	AK130584|PLLP|51090|plasmolipin##AK313910|PLLP|51090|plasmolipin##NM_015993|PLLP|51090|plasmolipin##BC002760|PLLP|51090|plasmolipin##AK289599|PLLP|51090|plasmolipin##AF137386|PLLP|51090|plasmolipin##AK075050|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##NM_012106|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##BC003087|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##AK311018|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##AK298758|ARL2BP|23568|ADP-ribosylation factor-like 2 binding protein##NM_002990|CCL22|6367|chemokine (C-C motif) ligand 22##AK311970|CCL22|6367|chemokine (C-C motif) ligand 22##U83171|CCL22|6367|chemokine (C-C motif) ligand 22##U83239|CCL22|6367|chemokine (C-C motif) ligand 22##BC027952|CCL22|6367|chemokine (C-C motif) ligand 22##DQ890922|CCL22|6367|chemokine (C-C motif) ligand 22##DQ893311|CCL22|6367|chemokine (C-C motif) ligand 22##DQ894072|CCL22|6367|chemokine (C-C motif) ligand 22##DQ896625|CCL22|6367|chemokine (C-C motif) ligand 22##EU176526|CCL22|6367|chemokine (C-C motif) ligand 22##AK222692|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK223351|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##AK313806|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U84487|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##U91835|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC001163|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##BC016164|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##NM_002996|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ890704|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ891871|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ893888|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##DQ895059|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1##CR457426|CX3CL1|6376|chemokine (C-X3-C motif) ligand 1	0.0	
chr16	71842588	71842683	reg1037540.p1	3.373	+	TSC_hg19_v1_chr16_-_71842690 AB015317 Y12226	-1	-	AL110198 TSC_hg19_v1_chr16_-_71782208	-60446	-	TSC_hg19_v1_chr16_-_71757789 AK124678	-84871	-	TSC_hg19_v1_chr16_-_71842738 AK293233 AK225906 AK294546 AK299630	118	-	TSC_hg19_v1_chr16_-_71842963 BC036283 AK128078 NM_001030007 NM_001128 AK314484	343	-	TSC_hg19_v1_chr16_+_71879878 AB621810	37240	+	AB015317|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##Y12226|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AL110198|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK124678|PHLPP2|23035|PH domain and leucine rich repeat protein phosphatase 2##AK293233|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK225906|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK294546|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK299630|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##BC036283|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK128078|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##NM_001030007|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##NM_001128|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit##AK314484|AP1G1|164|adaptor-related protein complex 1, gamma 1 subunit	0.0	
chr16	72159116	72159232	reg1000823.p2	3.373	+	NM_001142318	-30960	-	NM_001142317	-31407	-	NM_014003 TSC_hg19_v1_chr16_+_72127745 AK301074 AK291634 AK293776 AK297269 AK311169 D86977 AK309391 BC004235 BC008340 AK297791	-31412	+	AL136795 AK315004 BC028423 AK093285 AX748032 NM_031293	46869	-	AK122925 NM_001160213	47174	-	TSC_hg19_v1_chr16_+_72699031 AK021563	539890	+	NM_001142318|TXNL4B|54957|thioredoxin-like 4B##NM_001142317|TXNL4B|54957|thioredoxin-like 4B##NM_014003|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK301074|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK291634|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK293776|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK297269|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK311169|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##D86977|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK309391|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##BC004235|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##BC008340|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AK297791|DHX38|9785|DEAH (Asp-Glu-Ala-His) box polypeptide 38##AL136795|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK315004|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##BC028423|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK093285|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_031293|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##AK122925|PMFBP1|83449|polyamine modulated factor 1 binding protein 1##NM_001160213|PMFBP1|83449|polyamine modulated factor 1 binding protein 1	0.0	
chr2	216804082	216804208	reg1037208.p1	3.373	+	BC117176 BC143754 BC143763 AB209840 TSC_hg19_v1_chr2_-_216300792 CR749316 CR749317 AB191261 AL832202 AL832771 BC078656 BC100030 BX537590 BX538017 BX538018 BX640608 BX640731 BX640802 BX640803 BX640875 BX640999 BX649182 NM_002026 NM_054034 NM_212474 NM_212476 NM_212478 NM_212482	-503363	-	X02761 AB384664 AB385106 EU831936 EU832031 TSC_hg19_v1_chr2_-_216300597 AJ276395 AJ535086	-503625	-	AF312399 TSC_hg19_v1_chr2_-_216290008	-514173	-	AK000978 BC082990 TSC_hg19_v1_chr2_-_216878341 BC032747 NM_018000	74191	-	AB464010 EU832649 EU832727 TSC_hg19_v1_chr2_-_216946491 AK315795 BC002529 AK296208 AJ250303 AF232009 AF212234 NM_018441	142399	-	NM_001142310 NM_001142311 NM_001142312 NM_138390 TSC_hg19_v1_chr2_+_216946641 AK313536 BC008604 AK091582 AX747073 CR933667	142547	+	BC117176|FN1|2335|fibronectin 1##BC143754|FN1|2335|fibronectin 1##BC143763|FN1|2335|fibronectin 1##AB209840|FN1|2335|fibronectin 1##CR749316|FN1|2335|fibronectin 1##CR749317|FN1|2335|fibronectin 1##AB191261|FN1|2335|fibronectin 1##AL832202|FN1|2335|fibronectin 1##AL832771|FN1|2335|fibronectin 1##BC078656|FN1|2335|fibronectin 1##BC100030|FN1|2335|fibronectin 1##BX537590|FN1|2335|fibronectin 1##BX538017|FN1|2335|fibronectin 1##BX538018|FN1|2335|fibronectin 1##BX640608|FN1|2335|fibronectin 1##BX640731|FN1|2335|fibronectin 1##BX640802|FN1|2335|fibronectin 1##BX640803|FN1|2335|fibronectin 1##BX640875|FN1|2335|fibronectin 1##BX640999|FN1|2335|fibronectin 1##BX649182|FN1|2335|fibronectin 1##NM_002026|FN1|2335|fibronectin 1##NM_054034|FN1|2335|fibronectin 1##NM_212474|FN1|2335|fibronectin 1##NM_212476|FN1|2335|fibronectin 1##NM_212478|FN1|2335|fibronectin 1##NM_212482|FN1|2335|fibronectin 1##X02761|FN1|2335|fibronectin 1##EU831936|FN1|2335|fibronectin 1##EU832031|FN1|2335|fibronectin 1##AJ276395|FN1|2335|fibronectin 1##AJ535086|FN1|2335|fibronectin 1##AF312399|FN1|2335|fibronectin 1##AK000978|MREG|55686|melanoregulin##BC082990|MREG|55686|melanoregulin##BC032747|MREG|55686|melanoregulin##NM_018000|MREG|55686|melanoregulin##EU832649|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##EU832727|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK315795|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##BC002529|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AK296208|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AJ250303|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF232009|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##AF212234|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_018441|PECR|55825|peroxisomal trans-2-enoyl-CoA reductase##NM_001142310|TMEM169|92691|transmembrane protein 169##NM_001142311|TMEM169|92691|transmembrane protein 169##NM_001142312|TMEM169|92691|transmembrane protein 169##NM_138390|TMEM169|92691|transmembrane protein 169##AK313536|TMEM169|92691|transmembrane protein 169##BC008604|TMEM169|92691|transmembrane protein 169##AK091582|TMEM169|92691|transmembrane protein 169##CR933667|TMEM169|92691|transmembrane protein 169	0.0	
chr2	232531424	232531521	reg1039661.p2	3.373	+	BC024251 NM_152614 BC034405 BC063389 DQ891288 DQ894472	-73855	+	AF272362 BC051914 AK300222 AK301102 NM_006056 BC036543	-136318	-	BC033054 TSC_hg19_v1_chr2_-_232379076	-152390	-	TSC_hg19_v1_chr2_+_232573239 NM_001099285 NM_002823 BC022433 AK223605 AK314106 M14630 BC034921	41762	+	BC001624 BC098420 BC070480 BC003510 BC051265 BC071879 BC071647 TSC_hg19_v1_chr2_+_232573265 M26708 M14483 BC066905 M14794 DQ892963 DQ896210 AF170294 AF348514 AY169282	41860	+	BT007278 CR456980 AB464015 DQ893223 DQ896553 AJ001626 TSC_hg19_v1_chr2_-_232645990 BC007831 AF022912 NM_002601 BC001054 AK311623	114453	-	NM_152614|C2orf57|165100|chromosome 2 open reading frame 57##BC034405|C2orf57|165100|chromosome 2 open reading frame 57##BC063389|C2orf57|165100|chromosome 2 open reading frame 57##DQ891288|C2orf57|165100|chromosome 2 open reading frame 57##DQ894472|C2orf57|165100|chromosome 2 open reading frame 57##AF272362|NMUR1|10316|neuromedin U receptor 1##BC051914|NMUR1|10316|neuromedin U receptor 1##AK300222|NMUR1|10316|neuromedin U receptor 1##NM_006056|NMUR1|10316|neuromedin U receptor 1##BC036543|NMUR1|10316|neuromedin U receptor 1##BC033054|LINC00471|151477|long intergenic non-protein coding RNA 471##NM_001099285|PTMA|5757|prothymosin, alpha##NM_002823|PTMA|5757|prothymosin, alpha##BC022433|PTMA|5757|prothymosin, alpha##AK223605|PTMA|5757|prothymosin, alpha##AK314106|PTMA|5757|prothymosin, alpha##M14630|PTMA|5757|prothymosin, alpha##BC034921|PTMA|5757|prothymosin, alpha##BC098420|PTMA|5757|prothymosin, alpha##BC070480|PTMA|5757|prothymosin, alpha##BC003510|PTMA|5757|prothymosin, alpha##BC051265|PTMA|5757|prothymosin, alpha##BC071879|PTMA|5757|prothymosin, alpha##BC071647|PTMA|5757|prothymosin, alpha##M26708|PTMA|5757|prothymosin, alpha##M14483|PTMA|5757|prothymosin, alpha##BC066905|PTMA|5757|prothymosin, alpha##M14794|PTMA|5757|prothymosin, alpha##DQ892963|PTMA|5757|prothymosin, alpha##DQ896210|PTMA|5757|prothymosin, alpha##AF348514|PTMA|5757|prothymosin, alpha##AY169282|PTMA|5757|prothymosin, alpha##BT007278|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##CR456980|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ893223|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##DQ896553|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AJ001626|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC007831|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##AF022912|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##NM_002601|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta##BC001054|PDE6D|5147|phosphodiesterase 6D, cGMP-specific, rod, delta	0.0	
chr4	102358855	102358976	reg1046025.p2	3.373	+	BC098424 EU192652 NM_000944 NM_001130691 NM_001130692 TSC_hg19_v1_chr4_-_102268635 EU192653	-90285	-	AK290532 TSC_hg19_v1_chr4_-_102268547	-90400	-	TSC_hg19_v1_chr4_-_102268343 AL353950	-90543	-	NM_001127507 NM_017935 TSC_hg19_v1_chr4_+_102711808	352881	+	TSC_hg19_v1_chr4_+_102711886 BC032241 AK292133 AL834291 EU051376 AB587395	353020	+	NM_001083907 TSC_hg19_v1_chr4_+_102734998 AK000713	376093	+	BC098424|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##EU192652|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_000944|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001130691|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001130692|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##EU192653|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AK290532|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##AL353950|PPP3CA|5530|protein phosphatase 3, catalytic subunit, alpha isozyme##NM_001127507|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_017935|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##BC032241|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK292133|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AL834291|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##EU051376|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##NM_001083907|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1##AK000713|BANK1|55024|B-cell scaffold protein with ankyrin repeats 1	0.0	
chr4	170358743	170358878	reg1040037.p2	3.373	+	TSC_hg19_v1_chr4_-_170192202 NM_020870	-166590	-	AK021429 TSC_hg19_v1_chr4_-_170192108	-166703	-	TSC_hg19_v1_chr4_-_170192099 BC053671	-166763	-	BC015147 BC114491 AB067488 CR933642 AL050385 TSC_hg19_v1_chr4_-_170533735 BC068201 CR936672	174826	-	TSC_hg19_v1_chr4_-_170533762 NM_001199397 NM_001199398 NM_001199399 NM_001199400 NM_012224	174959	-	TSC_hg19_v1_chr4_+_170541683 NM_001243372 NM_001829 NM_173872	182861	+	NM_020870|SH3RF1|57630|SH3 domain containing ring finger 1##AK021429|SH3RF1|57630|SH3 domain containing ring finger 1##BC053671|SH3RF1|57630|SH3 domain containing ring finger 1##BC015147|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC114491|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AB067488|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR933642|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##AL050385|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##BC068201|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##CR936672|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199397|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199398|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199399|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001199400|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_012224|NEK1|4750|NIMA (never in mitosis gene a)-related kinase 1##NM_001243372|CLCN3|1182|chloride channel 3##NM_001829|CLCN3|1182|chloride channel 3##NM_173872|CLCN3|1182|chloride channel 3	0.0	
chr5	155829392	155829510	reg1036537.p1	3.373	+	TSC_hg19_v1_chr5_+_155754172 BC020740 AK292794	-75278	+	BX537948 NM_000337 NM_001128209 NM_172244	-75691	+	NM_001099293 AK302388	-1436165	+	CU679215 AK301337 AK312746 BC008988 NM_001146726 NM_138379	560784	-	BC013325 TSC_hg19_v1_chr5_-_156485247	655732	-	TSC_hg19_v1_chr5_-_156485459 NM_001099414 NM_012206	656014	-	BC020740|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##AK292794|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##BX537948|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_000337|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001128209|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_172244|SGCD|6444|sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)##NM_001099293|KIF4B|285643|kinesin family member 4B##AK302388|KIF4B|285643|kinesin family member 4B##AK301337|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##AK312746|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC008988|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_001146726|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##NM_138379|TIMD4|91937|T-cell immunoglobulin and mucin domain containing 4##BC013325|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_001099414|HAVCR1|26762|hepatitis A virus cellular receptor 1##NM_012206|HAVCR1|26762|hepatitis A virus cellular receptor 1	0.161781	
chr5	9462068	9462144	reg1044455.p1	3.373	+	TSC_hg19_v1_chr5_+_7869306 BC062577	-1592796	+	AF121214 BC109216 BC109217 NM_002454 NM_024010 TSC_hg19_v1_chr5_+_7869273 AK308442 AK311663 AF025794 BC054816 BC035977	-1592847	+	TSC_hg19_v1_chr5_-_7869116 AK026927 AF161354 NM_024091	-1592974	-	U52840 TSC_hg19_v1_chr5_-_9546188 AK307587 NM_003966	84088	-	BC095521 NM_019599	168356	-	TSC_hg19_v1_chr5_-_10249982 CU687696 BC063406	787878	-	BC062577|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF121214|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109216|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC109217|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_002454|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##NM_024010|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK308442|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK311663|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AF025794|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC054816|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##BC035977|MTRR|4552|5-methyltetrahydrofolate-homocysteine methyltransferase reductase##AK026927|FASTKD3|79072|FAST kinase domains 3##AF161354|FASTKD3|79072|FAST kinase domains 3##NM_024091|FASTKD3|79072|FAST kinase domains 3##U52840|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##AK307587|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##NM_003966|SEMA5A|9037|sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A##BC095521|TAS2R1|50834|taste receptor, type 2, member 1##NM_019599|TAS2R1|50834|taste receptor, type 2, member 1##BC063406|FAM173B|134145|family with sequence similarity 173, member B	0.0	
chr6	114228404	114228530	reg1038751.p1	3.373	+	TSC_hg19_v1_chr6_+_114178543 AK074526 NM_002356 BC013004 BC028284 BC068059 D10522 M68956 BC089040 EU832331 EU832416 AB463910	-49733	+	AK122906 NM_001013734	-1559936	+	TSC_hg19_v1_chr6_-_112575881 BC066552	-1652572	-	TSC_hg19_v1_chr6_-_114292291 U31814 AK097376	63805	-	TSC_hg19_v1_chr6_-_114292324 BC031055 BC013141 AK296856 NM_001527	63869	-	AF503292 NM_153612 BC093911 BC093913	155557	-	AK074526|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##NM_002356|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC013004|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC028284|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC068059|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##D10522|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##M68956|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##BC089040|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832331|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##EU832416|MARCKS|4082|myristoylated alanine-rich protein kinase C substrate##AK122906|RFPL4B|442247|ret finger protein-like 4B##NM_001013734|RFPL4B|442247|ret finger protein-like 4B##BC066552|LAMA4|3910|laminin, alpha 4##U31814|HDAC2|3066|histone deacetylase 2##AK097376|HDAC2|3066|histone deacetylase 2##BC031055|HDAC2|3066|histone deacetylase 2##BC013141|HDAC2|3066|histone deacetylase 2##AK296856|HDAC2|3066|histone deacetylase 2##NM_001527|HDAC2|3066|histone deacetylase 2##AF503292|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##NM_153612|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093911|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5##BC093913|HS3ST5|222537|heparan sulfate (glucosamine) 3-O-sulfotransferase 5	0.0	
chr9	126460087	126460194	reg1042224.p1	3.373	+	NM_173689 AK123000 DQ426866 AY720432	-341647	+	AL136866 NM_001171137 TSC_hg19_v1_chr9_-_126030866 BC108731 AK027890	-429252	-	TSC_hg19_v1_chr9_-_126030831 AL833947 AL834150 BC017732 NM_018387	-429320	-	CU691746 TSC_hg19_v1_chr9_-_126692267 BC028061 BC039703 AK295710 AK024782 AK225104 NM_020946 NM_024820 BC009616	232171	-	TSC_hg19_v1_chr9_+_126773887 AK027597 NM_004789	313743	+	TSC_hg19_v1_chr9_+_126774046 BC034458	313931	+	NM_173689|CRB2|286204|crumbs homolog 2 (Drosophila)##AK123000|CRB2|286204|crumbs homolog 2 (Drosophila)##AY720432|CRB2|286204|crumbs homolog 2 (Drosophila)##AL136866|STRBP|55342|spermatid perinuclear RNA binding protein##NM_001171137|STRBP|55342|spermatid perinuclear RNA binding protein##BC108731|STRBP|55342|spermatid perinuclear RNA binding protein##AK027890|STRBP|55342|spermatid perinuclear RNA binding protein##AL833947|STRBP|55342|spermatid perinuclear RNA binding protein##AL834150|STRBP|55342|spermatid perinuclear RNA binding protein##BC017732|STRBP|55342|spermatid perinuclear RNA binding protein##NM_018387|STRBP|55342|spermatid perinuclear RNA binding protein##BC028061|DENND1A|57706|DENN/MADD domain containing 1A##BC039703|DENND1A|57706|DENN/MADD domain containing 1A##AK295710|DENND1A|57706|DENN/MADD domain containing 1A##AK024782|DENND1A|57706|DENN/MADD domain containing 1A##AK225104|DENND1A|57706|DENN/MADD domain containing 1A##NM_020946|DENND1A|57706|DENN/MADD domain containing 1A##NM_024820|DENND1A|57706|DENN/MADD domain containing 1A##BC009616|DENND1A|57706|DENN/MADD domain containing 1A##AK027597|LHX2|9355|LIM homeobox 2##NM_004789|LHX2|9355|LIM homeobox 2##BC034458|LHX2|9355|LIM homeobox 2	0.0	
chr9	139334166	139334252	reg1030856.p2	3.373	+	TSC_hg19_v1_chr9_+_139305109 AK299304 AK308104 AK307206 D21064 D50913 AK296617 BC111399 BC033103 NM_015160 BC022949	-29100	+	TSC_hg19_v1_chr9_+_139305083 BC132724 BC136599	-29129	+	TSC_hg19_v1_chr9_-_139305058 NM_001039707 NM_001039708 NM_006643	-29154	-	TSC_hg19_v1_chr9_-_139334261 BC028032 NM_019892	49	-	TSC_hg19_v1_chr9_-_139334267 AL832846	61	-	BC110356 TSC_hg19_v1_chr9_-_139334317	102	-	AK299304|PMPCA|23203|peptidase (mitochondrial processing) alpha##AK308104|PMPCA|23203|peptidase (mitochondrial processing) alpha##AK307206|PMPCA|23203|peptidase (mitochondrial processing) alpha##D21064|PMPCA|23203|peptidase (mitochondrial processing) alpha##D50913|PMPCA|23203|peptidase (mitochondrial processing) alpha##AK296617|PMPCA|23203|peptidase (mitochondrial processing) alpha##BC111399|PMPCA|23203|peptidase (mitochondrial processing) alpha##BC033103|PMPCA|23203|peptidase (mitochondrial processing) alpha##NM_015160|PMPCA|23203|peptidase (mitochondrial processing) alpha##BC022949|PMPCA|23203|peptidase (mitochondrial processing) alpha##BC132724|PMPCA|23203|peptidase (mitochondrial processing) alpha##BC136599|PMPCA|23203|peptidase (mitochondrial processing) alpha##NM_001039707|SDCCAG3|10807|serologically defined colon cancer antigen 3##NM_001039708|SDCCAG3|10807|serologically defined colon cancer antigen 3##NM_006643|SDCCAG3|10807|serologically defined colon cancer antigen 3##BC028032|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa##NM_019892|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa##AL832846|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa##BC110356|INPP5E|56623|inositol polyphosphate-5-phosphatase, 72 kDa	0.0	
chr9	21381896	21382076	reg1031109.p2	3.373	+	AB464595 CU686802 HQ258738 JN848523 BC093988 BC112002 BC069427 NM_006900	-13947	-	AB590746 BC069471 BC096697 BC096710 BC096730 BC098357 NM_021002	-31101	-	BX538121 BC064958 TSC_hg19_v1_chr9_-_21335388 AB037775 AL713669 BC039133 AK091715 AY172949 NM_018847	-46653	-	AY255838 V00548 AB590747 CR541921 JN848522 BC074936 BC074937 BC104163 BC104164 M54886 V00544 V00549 NM_000605	3340	-	K01900 NM_002170 BC104828 BC104830 V00545 V00550	27154	+	NM_024013 V00538 V00537 BC112300 BC112302 BC074928 BC074929 AB464595 CU686802 HQ258738 JN848523	58493	+	HQ258738|IFNA1|3439|interferon, alpha 1##BC093988|IFNA13|3447|interferon, alpha 13##BC112002|IFNA1|3439|interferon, alpha 1##BC069427|IFNA13|3447|interferon, alpha 13##NM_006900|IFNA13|3447|interferon, alpha 13##BC069471|IFNA6|3443|interferon, alpha 6##BC096697|IFNA6|3443|interferon, alpha 6##BC096710|IFNA6|3443|interferon, alpha 6##BC096730|IFNA6|3443|interferon, alpha 6##BC098357|IFNA6|3443|interferon, alpha 6##NM_021002|IFNA6|3443|interferon, alpha 6##BX538121|KLHL9|55958|kelch-like 9 (Drosophila)##BC064958|KLHL9|55958|kelch-like 9 (Drosophila)##AB037775|KLHL9|55958|kelch-like 9 (Drosophila)##AL713669|KLHL9|55958|kelch-like 9 (Drosophila)##BC039133|KLHL9|55958|kelch-like 9 (Drosophila)##AK091715|KLHL9|55958|kelch-like 9 (Drosophila)##AY172949|KLHL9|55958|kelch-like 9 (Drosophila)##NM_018847|KLHL9|55958|kelch-like 9 (Drosophila)##AY255838|IFNA2|3440|interferon, alpha 2##V00548|IFNA2|3440|interferon, alpha 2##CR541921|IFNA2|3440|interferon, alpha 2##BC074936|IFNA2|3440|interferon, alpha 2##BC074937|IFNA2|3440|interferon, alpha 2##BC104163|IFNA2|3440|interferon, alpha 2##BC104164|IFNA2|3440|interferon, alpha 2##M54886|IFNA2|3440|interferon, alpha 2##V00544|IFNA2|3440|interferon, alpha 2##V00549|IFNA2|3440|interferon, alpha 2##NM_000605|IFNA2|3440|interferon, alpha 2##K01900|IFNA8|3445|interferon, alpha 8##NM_002170|IFNA8|3445|interferon, alpha 8##BC104828|IFNA8|3445|interferon, alpha 8##BC104830|IFNA8|3445|interferon, alpha 8##V00545|IFNA8|3445|interferon, alpha 8##V00550|IFNA8|3445|interferon, alpha 8##NM_024013|IFNA1|3439|interferon, alpha 1##V00538|IFNA1|3439|interferon, alpha 1##V00537|IFNA1|3439|interferon, alpha 1##BC112300|IFNA1|3439|interferon, alpha 1##BC112302|IFNA1|3439|interferon, alpha 1##BC074928|IFNA1|3439|interferon, alpha 1##BC074929|IFNA1|3439|interferon, alpha 1##HQ258738|IFNA1|3439|interferon, alpha 1	0.0	
chrX	108952656	108952816	reg1040356.p2	3.373	+	DQ891287 DQ894471 DQ896649 DQ896656 DQ896659 DQ896664 EF535525 BC035330 AJ012743 NM_012282 AK223306 AK314923 DQ192294 TSC_hg19_v1_chrX_-_108868398	-84412	-	AF246127 AJ277591 AJ278323 NM_001242618 TSC_hg19_v1_chrX_+_108780470	-172382	+	NM_001242617 TSC_hg19_v1_chrX_+_108780077 AF201942 BC014888 AF212223	-172653	+	TSC_hg19_v1_chrX_-_108976464 Y12777 Y13058 AB061714 BC034959 AK307566 AK294915	23743	-	TSC_hg19_v1_chrX_-_108976528 AB061713 AK292070 AF030555 NM_004458 NM_022977	23828	-	TSC_hg19_v1_chrX_+_109245890 AK094127 NM_017698	293134	+	DQ891287|KCNE1L|23630|KCNE1-like##DQ894471|KCNE1L|23630|KCNE1-like##DQ896649|KCNE1L|23630|KCNE1-like##DQ896656|KCNE1L|23630|KCNE1-like##DQ896659|KCNE1L|23630|KCNE1-like##DQ896664|KCNE1L|23630|KCNE1-like##EF535525|KCNE1L|23630|KCNE1-like##BC035330|KCNE1L|23630|KCNE1-like##AJ012743|KCNE1L|23630|KCNE1-like##NM_012282|KCNE1L|23630|KCNE1-like##AK223306|KCNE1L|23630|KCNE1-like##AK314923|KCNE1L|23630|KCNE1-like##DQ192294|KCNE1L|23630|KCNE1-like##AF246127|NXT2|55916|nuclear transport factor 2-like export factor 2##AJ277591|NXT2|55916|nuclear transport factor 2-like export factor 2##AJ278323|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242618|NXT2|55916|nuclear transport factor 2-like export factor 2##NM_001242617|NXT2|55916|nuclear transport factor 2-like export factor 2##AF201942|NXT2|55916|nuclear transport factor 2-like export factor 2##BC014888|NXT2|55916|nuclear transport factor 2-like export factor 2##AF212223|NXT2|55916|nuclear transport factor 2-like export factor 2##Y12777|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##Y13058|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061714|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##BC034959|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK307566|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK294915|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AB061713|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK292070|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AF030555|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_004458|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##NM_022977|ACSL4|2182|acyl-CoA synthetase long-chain family member 4##AK094127|TMEM164|84187|transmembrane protein 164##NM_017698|TMEM164|84187|transmembrane protein 164	0.0	
chr10	125312962	125313046	reg1031900.p2	3.372	+	TSC_hg19_v1_chr10_+_124914364 AB463452 AB590162 CU692616 DQ891852 DQ895042	-398648	+	TSC_hg19_v1_chr10_+_124913926 AF081496 AF047472 AF047473 BC005138 BC022438 AF053304	-399058	+	TSC_hg19_v1_chr10_+_124913906 AK312546 AK307958 AK293255	-399106	+	AJ505757 NM_153442 BC112011 BC113462	112873	+	BC137492 BC146862 AY358565 NM_198148	338492	-	TSC_hg19_v1_chr10_-_125851923 BC027908 AB011170 AK294961 NM_014863 NM_015892	538895	-	DQ891852|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##DQ895042|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF081496|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047472|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF047473|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC005138|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##BC022438|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AF053304|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK312546|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK307958|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AK293255|BUB3|9184|budding uninhibited by benzimidazoles 3 homolog (yeast)##AJ505757|GPR26|2849|G protein-coupled receptor 26##NM_153442|GPR26|2849|G protein-coupled receptor 26##BC112011|GPR26|2849|G protein-coupled receptor 26##BC113462|GPR26|2849|G protein-coupled receptor 26##BC137492|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC146862|CPXM2|119587|carboxypeptidase X (M14 family), member 2##AY358565|CPXM2|119587|carboxypeptidase X (M14 family), member 2##NM_198148|CPXM2|119587|carboxypeptidase X (M14 family), member 2##BC027908|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AB011170|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##AK294961|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_014863|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15##NM_015892|CHST15|51363|carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15	0.0	
chr12	11900481	11900577	reg1042454.p2	3.372	+	TSC_hg19_v1_chr12_+_11802905 U11732 AB385079 EU446474 CU692162 Z35761 FR719953	-97543	+	TSC_hg19_v1_chr12_+_11802787 BC043399 NM_001987	-97755	+	TSC_hg19_v1_chr12_+_11802659 AK289441	-97856	+	AK292995 TSC_hg19_v1_chr12_+_12223872 BC025778 NM_138723 AK223415	323354	+	AF281254 AF281255 NM_030766 NM_138722	323872	+	AK074543 TSC_hg19_v1_chr12_-_12291395	390855	-	U11732|ETV6|2120|ets variant 6##EU446474|ETV6|2120|ets variant 6##Z35761|ETV6|2120|ets variant 6##BC043399|ETV6|2120|ets variant 6##NM_001987|ETV6|2120|ets variant 6##AK289441|ETV6|2120|ets variant 6##AK292995|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##BC025778|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138723|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK223415|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281254|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AF281255|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_030766|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##NM_138722|BCL2L14|79370|BCL2-like 14 (apoptosis facilitator)##AK074543|LRP6|4040|low density lipoprotein receptor-related protein 6	0.0	
chr1	33446894	33447022	reg1042241.p1	3.372	+	NM_001127361 NM_153341 TSC_hg19_v1_chr1_-_33430415 AK131439	-16562	-	AY359883 TSC_hg19_v1_chr1_-_33366959 AY027543 BC020497 BC001418 BC013953 NM_033504 BC023260	-80024	-	TSC_hg19_v1_chr1_+_33352097 DQ426877 AK313907 BC001777 NM_002143	-94874	+	AB451267 AB451394 AY080900 U54645 BC009405 AK307731 TSC_hg19_v1_chr1_-_33502450 AK295105 AK296863 BC026705 AK291676 AK297036	55481	-	TSC_hg19_v1_chr1_-_33502463 BC070127 BC090040 U84371 U39945 AY080899	55499	-	TSC_hg19_v1_chr1_-_33502465 AB005621	55508	-	NM_001127361|RNF19B|127544|ring finger protein 19B##NM_153341|RNF19B|127544|ring finger protein 19B##AK131439|RNF19B|127544|ring finger protein 19B##AY359883|TMEM54|113452|transmembrane protein 54##AY027543|TMEM54|113452|transmembrane protein 54##BC020497|TMEM54|113452|transmembrane protein 54##BC001418|TMEM54|113452|transmembrane protein 54##BC013953|TMEM54|113452|transmembrane protein 54##NM_033504|TMEM54|113452|transmembrane protein 54##BC023260|TMEM54|113452|transmembrane protein 54##DQ426877|HPCA|3208|hippocalcin##AK313907|HPCA|3208|hippocalcin##BC001777|HPCA|3208|hippocalcin##NM_002143|HPCA|3208|hippocalcin##AB451267|AK2|204|adenylate kinase 2##AB451394|AK2|204|adenylate kinase 2##AY080900|AK2|204|adenylate kinase 2##U54645|AK2|204|adenylate kinase 2##BC009405|AK2|204|adenylate kinase 2##AK307731|AK2|204|adenylate kinase 2##AK295105|AK2|204|adenylate kinase 2##AK296863|AK2|204|adenylate kinase 2##BC026705|AK2|204|adenylate kinase 2##AK291676|AK2|204|adenylate kinase 2##AK297036|AK2|204|adenylate kinase 2##BC070127|AK2|204|adenylate kinase 2##BC090040|AK2|204|adenylate kinase 2##U84371|AK2|204|adenylate kinase 2##U39945|AK2|204|adenylate kinase 2##AY080899|AK2|204|adenylate kinase 2##AB005621|AK2|204|adenylate kinase 2	0.0	
chr15	67401958	67402095	reg1039124.p1	3.372	+	NM_005902 TSC_hg19_v1_chr15_+_67358197 BC050743 U68019 U76622 AB464213 EU446487 AB209616	-43625	+	TSC_hg19_v1_chr15_+_67358179 AK290881	-43851	+	NM_001142861 U59914	-401097	+	NM_001145102 AK316017	16097	+	AK298139 NM_001145103	28332	+	NM_001145104 AK300614 AK301348	56470	+	NM_005902|SMAD3|4088|SMAD family member 3##BC050743|SMAD3|4088|SMAD family member 3##U68019|SMAD3|4088|SMAD family member 3##U76622|SMAD3|4088|SMAD family member 3##EU446487|SMAD3|4088|SMAD family member 3##AB209616|SMAD3|4088|SMAD family member 3##AK290881|SMAD3|4088|SMAD family member 3##NM_001142861|SMAD6|4091|SMAD family member 6##U59914|SMAD6|4091|SMAD family member 6##NM_001145102|SMAD3|4088|SMAD family member 3##AK316017|SMAD3|4088|SMAD family member 3##AK298139|SMAD3|4088|SMAD family member 3##NM_001145103|SMAD3|4088|SMAD family member 3##NM_001145104|SMAD3|4088|SMAD family member 3##AK300614|SMAD3|4088|SMAD family member 3##AK301348|SMAD3|4088|SMAD family member 3	0.0	
chr19	11266973	11267153	reg1027616.p2	3.372	+	AY456387 TSC_hg19_v1_chr19_-_11266459 AK075287 AK303157 AK303266 BC105037 BC105039 NM_182513	-596	-	TSC_hg19_v1_chr19_+_11200148 AB209409 BC014514 AY114155 AB384938 DQ893879 BT007361	-66878	+	TSC_hg19_v1_chr19_+_11200138 AK295612 AK296312 AK299038 AK300313	-66931	+	AB528156 AY639929 CU687364 NM_015493	38162	-	TSC_hg19_v1_chr19_-_11308222 BC082762 AB284125 NM_001136191	41195	-	TSC_hg19_v1_chr19_-_11308465 AK000011 AK225038	41399	-	AY456387|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK075287|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK303157|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AK303266|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC105037|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##BC105039|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##NM_182513|SPC24|147841|SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)##AB209409|LDLR|3949|low density lipoprotein receptor##BC014514|LDLR|3949|low density lipoprotein receptor##AY114155|LDLR|3949|low density lipoprotein receptor##DQ893879|LDLR|3949|low density lipoprotein receptor##BT007361|LDLR|3949|low density lipoprotein receptor##AK295612|LDLR|3949|low density lipoprotein receptor##AK296312|LDLR|3949|low density lipoprotein receptor##AK299038|LDLR|3949|low density lipoprotein receptor##AK300313|LDLR|3949|low density lipoprotein receptor##AY639929|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_015493|KANK2|25959|KN motif and ankyrin repeat domains 2##BC082762|KANK2|25959|KN motif and ankyrin repeat domains 2##AB284125|KANK2|25959|KN motif and ankyrin repeat domains 2##NM_001136191|KANK2|25959|KN motif and ankyrin repeat domains 2##AK000011|KANK2|25959|KN motif and ankyrin repeat domains 2##AK225038|KANK2|25959|KN motif and ankyrin repeat domains 2	0.0	
chr20	62870488	62870624	reg1024928.p2	3.372	+	AB020642 NM_004535 TSC_hg19_v1_chr20_+_62795840	-74723	+	TSC_hg19_v1_chr20_+_62795804 BC018917	-74766	+	BC067481 BC067482 BC067483 CU688304 CU688306 NM_005286	-132373	-	TSC_hg19_v1_chr20_+_62887100 NM_001104925 NM_018257 BC040945 BC032332 AK001745 BC045775	16605	+	None	None	None	None	None	None	AB020642|MYT1|4661|myelin transcription factor 1##NM_004535|MYT1|4661|myelin transcription factor 1##BC018917|MYT1|4661|myelin transcription factor 1##BC067481|NPBWR2|2832|neuropeptides B/W receptor 2##BC067482|NPBWR2|2832|neuropeptides B/W receptor 2##BC067483|NPBWR2|2832|neuropeptides B/W receptor 2##NM_005286|NPBWR2|2832|neuropeptides B/W receptor 2##NM_001104925|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##NM_018257|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC040945|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC032332|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##AK001745|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2##BC045775|PCMTD2|55251|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	0.0	
chr2	232258061	232258221	reg1032223.p2	3.372	+	TSC_hg19_v1_chr2_+_232120778 AB055779	-137363	+	TSC_hg19_v1_chr2_+_232063410 AY929062	-194747	+	AY219922 TSC_hg19_v1_chr2_+_232063378	-194763	+	AF502430 NM_145236 TSC_hg19_v1_chr2_+_232260454 AK126207 AB528076	2281	+	AK001314 TSC_hg19_v1_chr2_-_232326464	68288	-	AB385068 CU677918 AK000221 TSC_hg19_v1_chr2_-_232329196 AK091742 AK095897 AK122805 AX747156 NM_005381 AK127608	70994	-	AY929062|ARMC9|80210|armadillo repeat containing 9##AY219922|ARMC9|80210|armadillo repeat containing 9##AF502430|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##NM_145236|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK126207|B3GNT7|93010|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7##AK001314|NCL|4691|nucleolin##AK000221|NCL|4691|nucleolin##AK091742|NCL|4691|nucleolin##AK095897|NCL|4691|nucleolin##AK122805|NCL|4691|nucleolin##NM_005381|NCL|4691|nucleolin##AK127608|NCL|4691|nucleolin	0.0	
chr2	7707999	7708110	reg1035803.p1	3.372	+	TSC_hg19_v1_chr2_+_7057585 NM_014746 BC050373 AK293854 D79983	-650467	+	NM_080657 AK312670 AF442151 BC017969 TSC_hg19_v1_chr2_+_7017907 DQ891977 DQ895168 CU676130	-690191	+	TSC_hg19_v1_chr2_-_7006650 AK308509	-701351	-	NM_002166 AY634687 TSC_hg19_v1_chr2_+_8822185 AK222682 BC030639 M97796 AK311988 D13891 AB463777 DQ890858 DQ894013	1114149	+	BC130610 TSC_hg19_v1_chr2_-_8977744 AK294832 AB033076 AL133620 AK296459 AB621829 AK057125 NM_020738	1269665	-	AB305044 TSC_hg19_v1_chr2_-_9143785 AK295907 BC146871 BC157827 AK027321 BC016005 NM_138799	1435767	-	NM_014746|RNF144A|9781|ring finger protein 144A##BC050373|RNF144A|9781|ring finger protein 144A##AK293854|RNF144A|9781|ring finger protein 144A##D79983|RNF144A|9781|ring finger protein 144A##NM_080657|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK312670|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AF442151|RSAD2|91543|radical S-adenosyl methionine domain containing 2##BC017969|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ891977|RSAD2|91543|radical S-adenosyl methionine domain containing 2##DQ895168|RSAD2|91543|radical S-adenosyl methionine domain containing 2##AK308509|CMPK2|129607|cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial##NM_002166|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AY634687|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK222682|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC030639|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##M97796|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##AK311988|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##D13891|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ890858|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##DQ894013|ID2|3398|inhibitor of DNA binding 2, dominant negative helix-loop-helix protein##BC130610|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK294832|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB033076|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AL133620|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK296459|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AK057125|KIDINS220|57498|kinase D-interacting substrate, 220kDa##NM_020738|KIDINS220|57498|kinase D-interacting substrate, 220kDa##AB305044|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK295907|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC146871|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC157827|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##AK027321|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##BC016005|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2##NM_138799|MBOAT2|129642|membrane bound O-acyltransferase domain containing 2	0.0	
chr3	152198162	152198293	reg1035111.p2	3.372	+	AY358260 NM_001123228	-139449	-	NM_207293 NM_207294 NM_207295 NM_207296 NM_207297	-181034	+	TSC_hg19_v1_chr3_-_151987332 AK304857 AK316515	-210882	-	NM_002563 Z49205	354508	+	TSC_hg19_v1_chr3_+_152880029 NM_002886	681799	+	TSC_hg19_v1_chr3_+_152880058 BC012362	681821	+	AY358260|TMEM14E|645843|transmembrane protein 14E##NM_001123228|TMEM14E|645843|transmembrane protein 14E##NM_207293|MBNL1|4154|muscleblind-like (Drosophila)##NM_207294|MBNL1|4154|muscleblind-like (Drosophila)##NM_207295|MBNL1|4154|muscleblind-like (Drosophila)##NM_207296|MBNL1|4154|muscleblind-like (Drosophila)##NM_207297|MBNL1|4154|muscleblind-like (Drosophila)##AK304857|LOC401093|401093|uncharacterized LOC401093##AK316515|LOC401093|401093|uncharacterized LOC401093##NM_002563|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##Z49205|P2RY1|5028|purinergic receptor P2Y, G-protein coupled, 1##NM_002886|RAP2B|5912|RAP2B, member of RAS oncogene family##BC012362|RAP2B|5912|RAP2B, member of RAS oncogene family	0.0	
chr3	192908412	192908531	reg1037270.p1	3.372	+	BC036194 BC045582 NM_178496	-272530	-	BC013123 TSC_hg19_v1_chr3_-_192635639 AK290447 BX648517	-272835	-	AK312513 TSC_hg19_v1_chr3_-_192445344 BC022524 NM_004113	-463106	-	TSC_hg19_v1_chr3_+_192958897 BC048095 NM_020386	50433	+	TSC_hg19_v1_chr3_+_192959112 AB030816	50639	+	AY823163 NM_198505 AK122613	188101	-	BC036194|MB21D2|151963|Mab-21 domain containing 2##BC045582|MB21D2|151963|Mab-21 domain containing 2##NM_178496|MB21D2|151963|Mab-21 domain containing 2##BC013123|MB21D2|151963|Mab-21 domain containing 2##AK290447|MB21D2|151963|Mab-21 domain containing 2##BX648517|MB21D2|151963|Mab-21 domain containing 2##AK312513|FGF12|2257|fibroblast growth factor 12##BC022524|FGF12|2257|fibroblast growth factor 12##NM_004113|FGF12|2257|fibroblast growth factor 12##BC048095|HRASLS|57110|HRAS-like suppressor##NM_020386|HRASLS|57110|HRAS-like suppressor##AB030816|HRASLS|57110|HRAS-like suppressor##AY823163|ATP13A5|344905|ATPase type 13A5##NM_198505|ATP13A5|344905|ATPase type 13A5##AK122613|ATP13A5|344905|ATPase type 13A5	0.887418	CTCF.p2:-29:0.887
chr3	72987889	72988069	reg1011198.p1	3.372	+	TSC_hg19_v1_chr3_+_72937356 NM_001080393	-50703	+	TSC_hg19_v1_chr3_-_72897587 BC017204 BC025270 BC032671 AK001401 NM_018130	-90387	-	BC017274 TSC_hg19_v1_chr3_-_72897575	-90404	-	TSC_hg19_v1_chr3_+_73045961 AK289901 BC100281	57978	+	TSC_hg19_v1_chr3_+_73045984 BC110889	58012	+	TSC_hg19_v1_chr3_+_73046081 AF327345 NM_174907 BC128136 BC128137	58141	+	NM_001080393|GXYLT2|727936|glucoside xylosyltransferase 2##BC017204|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC025270|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC032671|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK001401|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##NM_018130|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##BC017274|SHQ1|55164|SHQ1 homolog (S. cerevisiae)##AK289901|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC100281|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC110889|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##AF327345|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##NM_174907|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128136|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2##BC128137|PPP4R2|151987|protein phosphatase 4, regulatory subunit 2	0.0	
chr4	1015463	1015623	reg1033722.p1	3.372	+	AJ277437 NM_021923 AB385230 DQ892417 DQ895631 AK225486	-9278	+	AF312678 AY358303 NM_001004356 AF279689 NM_001004358	-9859	+	TSC_hg19_v1_chr4_+_1005410 AK172829	-10140	+	BC101258 BC101259 BC101260 BC101261 BC036250 AK310043 BC050356 AK096160 NM_001131034 NM_001193318 NM_194439	91789	-	TSC_hg19_v1_chr4_-_1166372 AK130164	150826	-	TSC_hg19_v1_chr4_-_1166378 BC002707	150845	-	AJ277437|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_021923|FGFRL1|53834|fibroblast growth factor receptor-like 1##DQ892417|FGFRL1|53834|fibroblast growth factor receptor-like 1##DQ895631|FGFRL1|53834|fibroblast growth factor receptor-like 1##AK225486|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF312678|FGFRL1|53834|fibroblast growth factor receptor-like 1##AY358303|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004356|FGFRL1|53834|fibroblast growth factor receptor-like 1##AF279689|FGFRL1|53834|fibroblast growth factor receptor-like 1##NM_001004358|FGFRL1|53834|fibroblast growth factor receptor-like 1##AK172829|FGFRL1|53834|fibroblast growth factor receptor-like 1##BC101258|RNF212|285498|ring finger protein 212##BC101259|RNF212|285498|ring finger protein 212##BC101260|RNF212|285498|ring finger protein 212##BC101261|RNF212|285498|ring finger protein 212##BC036250|RNF212|285498|ring finger protein 212##AK310043|RNF212|285498|ring finger protein 212##BC050356|RNF212|285498|ring finger protein 212##AK096160|RNF212|285498|ring finger protein 212##NM_001131034|RNF212|285498|ring finger protein 212##NM_001193318|RNF212|285498|ring finger protein 212##NM_194439|RNF212|285498|ring finger protein 212##AK130164|SPON2|10417|spondin 2, extracellular matrix protein##BC002707|SPON2|10417|spondin 2, extracellular matrix protein	0.0	
chr4	11473411	11473576	reg1038175.p1	3.372	+	BC025735 BC057803 NM_005114 TSC_hg19_v1_chr4_-_11430563	-42961	-	BC137553 BC137556 AK093001 AX747849 NM_052964 AB110420	-787092	-	TSC_hg19_v1_chr4_-_10459036 BC111484 BC067880 BC040874 NM_053042	-1014483	-	TSC_hg19_v1_chr4_-_13485956 BC018067 BC035054	2012458	-	TSC_hg19_v1_chr4_-_13485965 NM_001017979 NM_001159601 NM_004249	2012482	-	AB463932 AF009801 EU446467 BC111966 NM_001189	2072582	-	BC025735|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC057803|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##NM_005114|HS3ST1|9957|heparan sulfate (glucosamine) 3-O-sulfotransferase 1##BC137553|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC137556|CLNK|116449|cytokine-dependent hematopoietic cell linker##AK093001|CLNK|116449|cytokine-dependent hematopoietic cell linker##NM_052964|CLNK|116449|cytokine-dependent hematopoietic cell linker##AB110420|CLNK|116449|cytokine-dependent hematopoietic cell linker##BC067880|ZNF518B|85460|zinc finger protein 518B##BC040874|ZNF518B|85460|zinc finger protein 518B##NM_053042|ZNF518B|85460|zinc finger protein 518B##BC018067|RAB28|9364|RAB28, member RAS oncogene family##BC035054|RAB28|9364|RAB28, member RAS oncogene family##NM_001017979|RAB28|9364|RAB28, member RAS oncogene family##NM_001159601|RAB28|9364|RAB28, member RAS oncogene family##NM_004249|RAB28|9364|RAB28, member RAS oncogene family##AF009801|NKX3-2|579|NK3 homeobox 2##EU446467|NKX3-2|579|NK3 homeobox 2##BC111966|NKX3-2|579|NK3 homeobox 2##NM_001189|NKX3-2|579|NK3 homeobox 2	0.0	
chr5	14870636	14870759	reg1036906.p1	3.372	+	TSC_hg19_v1_chr5_+_14664826 BC015392	-205856	+	TSC_hg19_v1_chr5_+_14664772 NM_138348	-205921	+	AK123396 TSC_hg19_v1_chr5_-_14664742	-205970	-	DQ892588 DQ895806 AK222631 AK315012 BC014526 AF274753 AY358503 TSC_hg19_v1_chr5_-_14871888 AL833238 AB046801 BC009835 NM_054027	1158	-	TSC_hg19_v1_chr5_+_15500291 AB020647 NM_012304	629602	+	BC136424 TSC_hg19_v1_chr5_+_15500549	629847	+	BC015392|FAM105B|90268|family with sequence similarity 105, member B##NM_138348|FAM105B|90268|family with sequence similarity 105, member B##AK123396|LOC728178|728178|uncharacterized LOC728178##DQ892588|ANKH|56172|ankylosis, progressive homolog (mouse)##DQ895806|ANKH|56172|ankylosis, progressive homolog (mouse)##AK222631|ANKH|56172|ankylosis, progressive homolog (mouse)##AK315012|ANKH|56172|ankylosis, progressive homolog (mouse)##BC014526|ANKH|56172|ankylosis, progressive homolog (mouse)##AF274753|ANKH|56172|ankylosis, progressive homolog (mouse)##AY358503|ANKH|56172|ankylosis, progressive homolog (mouse)##AB046801|ANKH|56172|ankylosis, progressive homolog (mouse)##BC009835|ANKH|56172|ankylosis, progressive homolog (mouse)##NM_054027|ANKH|56172|ankylosis, progressive homolog (mouse)##AB020647|FBXL7|23194|F-box and leucine-rich repeat protein 7##NM_012304|FBXL7|23194|F-box and leucine-rich repeat protein 7##BC136424|FBXL7|23194|F-box and leucine-rich repeat protein 7	0.013024	
chr7	6764757	6764885	reg1042335.p1	3.372	+	AK092111 TSC_hg19_v1_chr7_+_6746715	-18112	+	TSC_hg19_v1_chr7_-_6746579 BC051892 BC154414 AB021643 NM_006956 NM_016265 AK293925	-18241	-	NM_017560	-109295	+	TSC_hg19_v1_chr7_+_6769414 AK296451	4594	+	AK314983 BC034495 NM_001099697 NM_173565	28918	+	AK296026 CU679629 AK000993 TSC_hg19_v1_chr7_-_6865849	101017	-	BC051892|ZNF12|7559|zinc finger protein 12##BC154414|ZNF12|7559|zinc finger protein 12##AB021643|ZNF12|7559|zinc finger protein 12##NM_006956|ZNF12|7559|zinc finger protein 12##NM_016265|ZNF12|7559|zinc finger protein 12##AK293925|ZNF12|7559|zinc finger protein 12##NM_017560|ZNF853|54753|zinc finger protein 853##AK314983|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##BC034495|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##NM_001099697|RSPH10B2|728194|radial spoke head 10 homolog B2 (Chlamydomonas)##NM_173565|RSPH10B|222967|radial spoke head 10 homolog B (Chlamydomonas)##AK296026|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)##AK000993|CCZ1B|221960|CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)	0.0	
chr9	92759089	92759171	reg1030926.p1	3.372	+	NM_006705 TSC_hg19_v1_chr9_+_92219926 AY845250 AK313689 AF079806 AF087883 BC000465 BC019325 D83023 AF078078 AB463699 BT007234 CR457038	-539149	+	BX648216 TSC_hg19_v1_chr9_-_92113005	-646123	-	BC054500 NM_001142287 NM_006378	-664520	-	BC008065 TSC_hg19_v1_chr9_-_93405107 AK124628 AK122986 NM_017594	645989	-	AK075020 NM_001135052 NM_003177 TSC_hg19_v1_chr9_+_93564062	804906	+	TSC_hg19_v1_chr9_+_93564068 Z29630 BC001645 BC002962	804937	+	NM_006705|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AY845250|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AK313689|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF079806|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF087883|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC000465|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BC019325|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##D83023|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##AF078078|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BT007234|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##CR457038|GADD45G|10912|growth arrest and DNA-damage-inducible, gamma##BX648216|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC054500|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_001142287|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##NM_006378|SEMA4D|10507|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D##BC008065|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK124628|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK122986|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##NM_017594|DIRAS2|54769|DIRAS family, GTP-binding RAS-like 2##AK075020|SYK|6850|spleen tyrosine kinase##NM_001135052|SYK|6850|spleen tyrosine kinase##NM_003177|SYK|6850|spleen tyrosine kinase##Z29630|SYK|6850|spleen tyrosine kinase##BC001645|SYK|6850|spleen tyrosine kinase##BC002962|SYK|6850|spleen tyrosine kinase	0.0	
chr9	95004927	95005075	reg1032471.p1	3.372	+	AB209757 CU675539 CU686661 Y08685 AK291546 TSC_hg19_v1_chr9_-_94877661 AK299153 BC068537 BC007085 AK098344 NM_006415 NM_178324	-127337	-	TSC_hg19_v1_chr9_-_94712441 BC051273 BC126454 BC130522 M97639 NM_004560	-292612	-	TSC_hg19_v1_chr9_-_94711095 BC033697	-293873	-	TSC_hg19_v1_chr9_-_95055945 AB209234 D28473 AK293014	50937	-	U04953 TSC_hg19_v1_chr9_-_95055976 BX647236 AK308202 BX647430 NM_013417 BX537417 BX537429 BX538109 BX647071 BX648567	50974	-	TSC_hg19_v1_chr9_-_95055986 AK301272	50985	-	AB209757|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##Y08685|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK291546|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK299153|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC068537|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC007085|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##AK098344|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_006415|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##NM_178324|SPTLC1|10558|serine palmitoyltransferase, long chain base subunit 1##BC051273|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC126454|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC130522|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##M97639|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##NM_004560|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##BC033697|ROR2|4920|receptor tyrosine kinase-like orphan receptor 2##AB209234|IARS|3376|isoleucyl-tRNA synthetase##D28473|IARS|3376|isoleucyl-tRNA synthetase##AK293014|IARS|3376|isoleucyl-tRNA synthetase##U04953|IARS|3376|isoleucyl-tRNA synthetase##BX647236|IARS|3376|isoleucyl-tRNA synthetase##AK308202|IARS|3376|isoleucyl-tRNA synthetase##BX647430|IARS|3376|isoleucyl-tRNA synthetase##NM_013417|IARS|3376|isoleucyl-tRNA synthetase##BX537417|IARS|3376|isoleucyl-tRNA synthetase##BX537429|IARS|3376|isoleucyl-tRNA synthetase##BX538109|IARS|3376|isoleucyl-tRNA synthetase##BX647071|IARS|3376|isoleucyl-tRNA synthetase##BX648567|IARS|3376|isoleucyl-tRNA synthetase##AK301272|IARS|3376|isoleucyl-tRNA synthetase	0.987825	CTCF.p2:6:0.988
chrX	123110664	123110763	reg1037149.p1	3.372	+	TSC_hg19_v1_chrX_+_123095638 BC001765	-15076	+	NM_001042750 NM_001042751 NM_006603 TSC_hg19_v1_chrX_+_123095573 AL831939 BX641002 CR749433 BX641003	-15140	+	TSC_hg19_v1_chrX_+_123094397 NM_001042749 AK098737 BX640970 AK298633 AK313559	-16189	+	AK026678 TSC_hg19_v1_chrX_+_123234596	123817	+	NM_001114937 NM_002351 AL023657 AK311645	369462	+	HE578281 BC140783 BC144542 BC144543 AF100772 NM_001163278 NM_001163279 NM_014253	986920	-	BC001765|STAG2|10735|stromal antigen 2##NM_001042750|STAG2|10735|stromal antigen 2##NM_001042751|STAG2|10735|stromal antigen 2##NM_006603|STAG2|10735|stromal antigen 2##AL831939|STAG2|10735|stromal antigen 2##BX641002|STAG2|10735|stromal antigen 2##CR749433|STAG2|10735|stromal antigen 2##BX641003|STAG2|10735|stromal antigen 2##NM_001042749|STAG2|10735|stromal antigen 2##AK098737|STAG2|10735|stromal antigen 2##BX640970|STAG2|10735|stromal antigen 2##AK298633|STAG2|10735|stromal antigen 2##AK313559|STAG2|10735|stromal antigen 2##AK026678|STAG2|10735|stromal antigen 2##NM_001114937|SH2D1A|4068|SH2 domain containing 1A##NM_002351|SH2D1A|4068|SH2 domain containing 1A##AL023657|SH2D1A|4068|SH2 domain containing 1A##AK311645|SH2D1A|4068|SH2 domain containing 1A##BC140783|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144542|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##BC144543|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##AF100772|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163278|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_001163279|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)##NM_014253|ODZ1|10178|odz, odd Oz/ten-m homolog 1 (Drosophila)	0.024234	
chr10	80827116	80827247	reg1035713.p1	3.371	+	TSC_hg19_v1_chr10_+_79793620 AK311776 AK311910 D28424 BX537975 BX647260 BC071926 AF147330 BC000523 BC003149	-1033550	+	NM_001026 NM_001142282 NM_001142283 NM_001142284 NM_001142285 NM_033022 TSC_hg19_v1_chr10_+_79793586	-1033625	+	TSC_hg19_v1_chr10_-_79789304 NM_007055	-1037867	-	TSC_hg19_v1_chr10_+_80828779 BC007288 NM_020338	1607	+	TSC_hg19_v1_chr10_+_80899458 AK025812	72303	+	TSC_hg19_v1_chr10_+_81003207 AB033050	175949	+	AK311776|RPS24|6229|ribosomal protein S24##AK311910|RPS24|6229|ribosomal protein S24##BX537975|RPS24|6229|ribosomal protein S24##BX647260|RPS24|6229|ribosomal protein S24##BC071926|RPS24|6229|ribosomal protein S24##AF147330|RPS24|6229|ribosomal protein S24##BC000523|RPS24|6229|ribosomal protein S24##BC003149|RPS24|6229|ribosomal protein S24##NM_001026|RPS24|6229|ribosomal protein S24##NM_001142282|RPS24|6229|ribosomal protein S24##NM_001142283|RPS24|6229|ribosomal protein S24##NM_001142284|RPS24|6229|ribosomal protein S24##NM_001142285|RPS24|6229|ribosomal protein S24##NM_033022|RPS24|6229|ribosomal protein S24##NM_007055|POLR3A|11128|polymerase (RNA) III (DNA directed) polypeptide A, 155kDa##BC007288|ZMIZ1|57178|zinc finger, MIZ-type containing 1##NM_020338|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AK025812|ZMIZ1|57178|zinc finger, MIZ-type containing 1##AB033050|ZMIZ1|57178|zinc finger, MIZ-type containing 1	0.021993	
chr11	14259275	14259410	reg1040661.p1	3.371	+	TSC_hg19_v1_chr11_+_13984277 NM_006108 AK291780 AK074803 BC136513 BC136563 BC006262 AB051390	-275059	+	AY423606 BC017377 TSC_hg19_v1_chr11_+_13690267 AY600449	-569075	+	TSC_hg19_v1_chr11_+_13690255 AK315527 AK026381	-569089	+	AK309550 AK309683 NM_001177315 NM_001102669	120709	-	TSC_hg19_v1_chr11_-_14380730 BC013106 AK299606 AK313976 NM_012250	121335	-	AK300103 NM_001177314	126709	-	NM_006108|SPON1|10418|spondin 1, extracellular matrix protein##AK291780|SPON1|10418|spondin 1, extracellular matrix protein##AK074803|SPON1|10418|spondin 1, extracellular matrix protein##BC136513|SPON1|10418|spondin 1, extracellular matrix protein##BC136563|SPON1|10418|spondin 1, extracellular matrix protein##AB051390|SPON1|10418|spondin 1, extracellular matrix protein##AY423606|FAR1|84188|fatty acyl CoA reductase 1##BC017377|FAR1|84188|fatty acyl CoA reductase 1##AY600449|FAR1|84188|fatty acyl CoA reductase 1##AK315527|FAR1|84188|fatty acyl CoA reductase 1##AK026381|FAR1|84188|fatty acyl CoA reductase 1##AK309550|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK309683|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177315|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001102669|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##BC013106|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK299606|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK313976|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_012250|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##AK300103|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2##NM_001177314|RRAS2|22800|related RAS viral (r-ras) oncogene homolog 2	0.0	
chr12	1700401	1700468	reg1041455.p2	3.371	+	TSC_hg19_v1_chr12_+_1100388 NM_178039 NM_178040 AB015617 AK091577 AB053470 AB053468 AB053469 AB053471	-599982	+	AF125948 TSC_hg19_v1_chr12_-_1058797 AK312026 BC042136 AK290047 BC104015 BC104016 BC104017 BC114507 BC114954 AK292160 AK294709 AK299283 AF125949 NM_134424	-641608	-	BC013629 TSC_hg19_v1_chr12_+_1017145	-683352	+	BC028132 NM_152441 TSC_hg19_v1_chr12_-_1703361	2917	-	AY009399 NM_030775	25787	+	BC001749 NM_032642	37977	+	NM_178039|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##NM_178040|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB015617|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AK091577|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053470|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053468|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053469|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AB053471|ERC1|23085|ELKS/RAB6-interacting/CAST family member 1##AF125948|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK312026|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC042136|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK290047|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104015|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104016|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC104017|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114507|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC114954|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK292160|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK294709|RAD52|5893|RAD52 homolog (S. cerevisiae)##AK299283|RAD52|5893|RAD52 homolog (S. cerevisiae)##AF125949|RAD52|5893|RAD52 homolog (S. cerevisiae)##NM_134424|RAD52|5893|RAD52 homolog (S. cerevisiae)##BC013629|WNK1|65125|WNK lysine deficient protein kinase 1##BC028132|FBXL14|144699|F-box and leucine-rich repeat protein 14##NM_152441|FBXL14|144699|F-box and leucine-rich repeat protein 14##AY009399|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_030775|WNT5B|81029|wingless-type MMTV integration site family, member 5B##BC001749|WNT5B|81029|wingless-type MMTV integration site family, member 5B##NM_032642|WNT5B|81029|wingless-type MMTV integration site family, member 5B	0.0	
chr13	60817022	60817123	reg1037045.p2	3.371	+	TSC_hg19_v1_chr13_-_60738096 NM_001042517	-78971	-	AB244756 AB244757 AB244758 AY818645 AK298509 AY750055 TSC_hg19_v1_chr13_-_60738063 AK316474 AK092024 AX747319 BX649186	-79091	-	BC048963 BC068504 AL137718 AK307652 BC034952 NM_030932	-229752	-	BX537910 NM_001146071 NM_030794	153518	+	EU643838 NM_001146070 TSC_hg19_v1_chr13_+_60971524	154407	+	AB527405 AK314607 BC027907 AF169693 AK094680 TSC_hg19_v1_chr13_-_61989297	1172181	-	NM_001042517|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244756|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244757|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AB244758|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY818645|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK298509|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AY750055|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK316474|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK092024|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX649186|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC048963|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC068504|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AL137718|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##AK307652|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BC034952|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##NM_030932|DIAPH3|81624|diaphanous homolog 3 (Drosophila)##BX537910|TDRD3|81550|tudor domain containing 3##NM_001146071|TDRD3|81550|tudor domain containing 3##NM_030794|TDRD3|81550|tudor domain containing 3##EU643838|TDRD3|81550|tudor domain containing 3##NM_001146070|TDRD3|81550|tudor domain containing 3##AK314607|PCDH20|64881|protocadherin 20##BC027907|PCDH20|64881|protocadherin 20##AF169693|PCDH20|64881|protocadherin 20##AK094680|PCDH20|64881|protocadherin 20	0.0	
chr14	35837032	35837158	reg1039173.p2	3.371	+	BC023659 TSC_hg19_v1_chr14_+_35761609 BC017882 X59417 BC002979 D28434 BC022354 AK316223 DQ892346 DQ895551 AB528503 CR456944	-75452	+	TSC_hg19_v1_chr14_+_35761597 AK298920 NM_002791 AK313011 BC070137	-75524	+	TSC_hg19_v1_chr14_+_35591757 AK301931 BC050339 BC044580 BC001542 AK304066 BC032221 NM_014672 AB002389 BX161394 BX161487 AK303508	-245243	+	TSC_hg19_v1_chr14_-_35873956 BT007091 CU678060 AB528629 AY033600 BC004983 M69043 BC002601 AK311515 AK313421 NM_020529	36829	-	AF260323 NM_032594 BC130377 BC130379 TSC_hg19_v1_chr14_+_36003369 AB037912 AK096639	166214	+	AB511280 BC150596 TSC_hg19_v1_chr14_-_36278252	441052	-	BC023659|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC017882|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##X59417|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC002979|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##D28434|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC022354|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK316223|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ892346|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##DQ895551|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##CR456944|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK298920|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##NM_002791|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK313011|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##BC070137|PSMA6|5687|proteasome (prosome, macropain) subunit, alpha type, 6##AK301931|KIAA0391|9692|KIAA0391##BC044580|KIAA0391|9692|KIAA0391##BC001542|KIAA0391|9692|KIAA0391##AK304066|KIAA0391|9692|KIAA0391##BC032221|KIAA0391|9692|KIAA0391##NM_014672|KIAA0391|9692|KIAA0391##AB002389|KIAA0391|9692|KIAA0391##BX161394|KIAA0391|9692|KIAA0391##BX161487|KIAA0391|9692|KIAA0391##AK303508|KIAA0391|9692|KIAA0391##BT007091|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AY033600|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC004983|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##M69043|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##BC002601|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK311515|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AK313421|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##NM_020529|NFKBIA|4792|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha##AF260323|INSM2|84684|insulinoma-associated 2##NM_032594|INSM2|84684|insulinoma-associated 2##BC130377|INSM2|84684|insulinoma-associated 2##BC130379|INSM2|84684|insulinoma-associated 2##AB037912|INSM2|84684|insulinoma-associated 2##AK096639|INSM2|84684|insulinoma-associated 2##AB511280|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)##BC150596|RALGAPA1|253959|Ral GTPase activating protein, alpha subunit 1 (catalytic)	0.0	
chr14	74335055	74335147	reg1031493.p1	3.371	+	TSC_hg19_v1_chr14_+_74318554 NM_001146154 NM_001146155 AY346133 AY424308 AK311280 NM_152444 BX641118 BC059364 AK309188 AK096410 BC034973	-16512	+	TSC_hg19_v1_chr14_-_74253912 NM_001043318 BC009202	-81182	-	TSC_hg19_v1_chr14_-_74227002 AK127785 NM_194278	-108136	-	NM_001242924 NM_001242926 NM_001242927 NM_001242928 NM_021188 AK299138	18217	+	BC050683 AK298520 TSC_hg19_v1_chr14_+_74353561 AK315206 AK223261 AK293350 AK298307 AK303834 AK304609 AK310031 AK301382 AK309957 BC000330 BC004357 U90919	18445	+	AK296040 NM_182480 BX248000	81534	+	NM_001146154|PTGR2|145482|prostaglandin reductase 2##NM_001146155|PTGR2|145482|prostaglandin reductase 2##AY346133|PTGR2|145482|prostaglandin reductase 2##AY424308|PTGR2|145482|prostaglandin reductase 2##AK311280|PTGR2|145482|prostaglandin reductase 2##NM_152444|PTGR2|145482|prostaglandin reductase 2##BX641118|PTGR2|145482|prostaglandin reductase 2##BC059364|PTGR2|145482|prostaglandin reductase 2##AK309188|PTGR2|145482|prostaglandin reductase 2##AK096410|PTGR2|145482|prostaglandin reductase 2##NM_001043318|C14orf43|91748|chromosome 14 open reading frame 43##BC009202|C14orf43|91748|chromosome 14 open reading frame 43##AK127785|C14orf43|91748|chromosome 14 open reading frame 43##NM_194278|C14orf43|91748|chromosome 14 open reading frame 43##NM_001242924|ZNF410|57862|zinc finger protein 410##NM_001242926|ZNF410|57862|zinc finger protein 410##NM_001242927|ZNF410|57862|zinc finger protein 410##NM_001242928|ZNF410|57862|zinc finger protein 410##NM_021188|ZNF410|57862|zinc finger protein 410##AK299138|ZNF410|57862|zinc finger protein 410##BC050683|ZNF410|57862|zinc finger protein 410##AK298520|ZNF410|57862|zinc finger protein 410##AK315206|ZNF410|57862|zinc finger protein 410##AK223261|ZNF410|57862|zinc finger protein 410##AK293350|ZNF410|57862|zinc finger protein 410##AK298307|ZNF410|57862|zinc finger protein 410##AK303834|ZNF410|57862|zinc finger protein 410##AK304609|ZNF410|57862|zinc finger protein 410##AK310031|ZNF410|57862|zinc finger protein 410##AK301382|ZNF410|57862|zinc finger protein 410##AK309957|ZNF410|57862|zinc finger protein 410##BC000330|ZNF410|57862|zinc finger protein 410##BC004357|ZNF410|57862|zinc finger protein 410##U90919|ZNF410|57862|zinc finger protein 410##AK296040|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##NM_182480|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)##BX248000|COQ6|51004|coenzyme Q6 homolog, monooxygenase (S. cerevisiae)	0.71289	CTCF.p2:13:0.713
chr15	75133766	75133833	reg1042146.p2	3.371	+	AK024055 NM_001030005 AB072900 BC018026 AY286501	-14809	+	AK300517 AK294807 AK309976 AK291819 AY358724 NM_021819	-28627	+	X60114 TSC_hg19_v1_chr15_+_75074849 AK298245 AK223626 AK310136 AK312669 BC104847 BC104875 X59932	-58943	+	TSC_hg19_v1_chr15_-_75135477 AB528889 CU691158 AK075047 BC056423 AK299380	1654	-	BC048289 TSC_hg19_v1_chr15_-_75135479	1680	-	TSC_hg19_v1_chr15_-_75135498 AK293181 BC036117	1701	-	AK024055|CPLX3|594855|complexin 3##NM_001030005|CPLX3|594855|complexin 3##AB072900|CPLX3|594855|complexin 3##BC018026|CPLX3|594855|complexin 3##AY286501|CPLX3|594855|complexin 3##AK300517|LMAN1L|79748|lectin, mannose-binding, 1 like##AK294807|LMAN1L|79748|lectin, mannose-binding, 1 like##AK309976|LMAN1L|79748|lectin, mannose-binding, 1 like##AK291819|LMAN1L|79748|lectin, mannose-binding, 1 like##AY358724|LMAN1L|79748|lectin, mannose-binding, 1 like##NM_021819|LMAN1L|79748|lectin, mannose-binding, 1 like##X60114|CSK|1445|c-src tyrosine kinase##AK298245|CSK|1445|c-src tyrosine kinase##AK223626|CSK|1445|c-src tyrosine kinase##AK310136|CSK|1445|c-src tyrosine kinase##AK312669|CSK|1445|c-src tyrosine kinase##BC104847|CSK|1445|c-src tyrosine kinase##BC104875|CSK|1445|c-src tyrosine kinase##X59932|CSK|1445|c-src tyrosine kinase##AK075047|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC056423|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK299380|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC048289|ULK3|25989|unc-51-like kinase 3 (C. elegans)##AK293181|ULK3|25989|unc-51-like kinase 3 (C. elegans)##BC036117|ULK3|25989|unc-51-like kinase 3 (C. elegans)	0.0	
chr16	27414806	27414974	reg1034507.p2	3.371	+	AK292663 NM_181078 NM_181079 AK312825	-1403	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-73546	+	TSC_hg19_v1_chr16_+_27325301 BC110343 AK223591 X52425	-89572	+	NM_021798 AY358826 AF254067	23714	+	TSC_hg19_v1_chr16_-_27561218 BX648143	146328	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	146341	-	AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BC110343|IL4R|3566|interleukin 4 receptor##AK223591|IL4R|3566|interleukin 4 receptor##X52425|IL4R|3566|interleukin 4 receptor##NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.0	
chr16	27439964	27440076	reg1040271.p2	3.371	+	NM_021798 AY358826 AF254067	-1416	+	AK292663 NM_181078 NM_181079 AK312825	-26533	+	TSC_hg19_v1_chr16_+_27341339 BC136365 BC151131	-98676	+	TSC_hg19_v1_chr16_-_27561218 BX648143	121198	-	TSC_hg19_v1_chr16_-_27561225 BC137229 BC151847 CR627430	121211	-	TSC_hg19_v1_chr16_-_27561248 NM_001520 U02619	121249	-	NM_021798|IL21R|50615|interleukin 21 receptor##AY358826|IL21R|50615|interleukin 21 receptor##AF254067|IL21R|50615|interleukin 21 receptor##AK292663|IL21R|50615|interleukin 21 receptor##NM_181078|IL21R|50615|interleukin 21 receptor##NM_181079|IL21R|50615|interleukin 21 receptor##AK312825|IL21R|50615|interleukin 21 receptor##BC136365|IL4R|3566|interleukin 4 receptor##BC151131|IL4R|3566|interleukin 4 receptor##BX648143|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC137229|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##BC151847|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##CR627430|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##NM_001520|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa##U02619|GTF3C1|2975|general transcription factor IIIC, polypeptide 1, alpha 220kDa	0.92312	CTCF.p2:-14:0.923
chr17	8845185	8845263	reg1027578.p2	3.371	+	AY725853 AF128881 NM_014308	-29408	-	BC110301 TSC_hg19_v1_chr17_-_8770992 AK091819 AX747201 NM_001010855	-74240	-	CU691888 BC040487 AK093092 AX747916 AY129026 NM_152599	-142672	-	AY725851 AY725852 AY725854 TSC_hg19_v1_chr17_-_8869025 BC028212 AK129627 AK314186 AK309074 NM_001142633 NM_001251851 NM_001251852 NM_001251853 NM_001251855	23757	-	TSC_hg19_v1_chr17_+_8924904 NM_004822 U75586	79743	+	AB590194 BT007319 DQ890985 DQ894161 CU679457 TSC_hg19_v1_chr17_-_9479138	633907	-	AY725853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AF128881|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_014308|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC110301|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##AK091819|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##NM_001010855|PIK3R6|146850|phosphoinositide-3-kinase, regulatory subunit 6##BC040487|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AK093092|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY129026|MFSD6L|162387|major facilitator superfamily domain containing 6-like##NM_152599|MFSD6L|162387|major facilitator superfamily domain containing 6-like##AY725851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AY725854|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##BC028212|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK129627|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK314186|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##AK309074|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001142633|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251851|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251852|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251853|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_001251855|PIK3R5|23533|phosphoinositide-3-kinase, regulatory subunit 5##NM_004822|NTN1|9423|netrin 1##U75586|NTN1|9423|netrin 1##BT007319|STX8|9482|syntaxin 8##DQ890985|STX8|9482|syntaxin 8##DQ894161|STX8|9482|syntaxin 8	0.0	
chr18	61787324	61787419	reg1038030.p1	3.371	+	NM_001031848 NM_002640 NM_198833 AK300391 L40377 TSC_hg19_v1_chr18_+_61637345 BC034528 U92984 BX571754 AK313782	-150058	+	NM_001123366	-170784	+	BC096217 BC096218 BC096219 BC096220 NM_005024 U35459	-204627	+	AJ007611 NM_033646	1630116	+	TSC_hg19_v1_chr18_+_63417845 BC036786	1630495	+	AB035301 NM_004361 TSC_hg19_v1_chr18_+_63418247	1630831	+	NM_001031848|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_002640|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_198833|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK300391|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##L40377|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BC034528|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##U92984|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##BX571754|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##AK313782|SERPINB8|5271|serpin peptidase inhibitor, clade B (ovalbumin), member 8##NM_001123366|HMSD|284293|histocompatibility (minor) serpin domain containing##BC096217|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096218|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096219|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##BC096220|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##NM_005024|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##U35459|SERPINB10|5273|serpin peptidase inhibitor, clade B (ovalbumin), member 10##AJ007611|CDH7|1005|cadherin 7, type 2##NM_033646|CDH7|1005|cadherin 7, type 2##BC036786|CDH7|1005|cadherin 7, type 2##AB035301|CDH7|1005|cadherin 7, type 2##NM_004361|CDH7|1005|cadherin 7, type 2	0.65729	CTCF.p2:-23:0.657
chr19	15443815	15443898	reg1033094.p2	3.371	+	TSC_hg19_v1_chr19_-_15443351 BC067129 BC091649 BC035266 BC047888	-526	-	TSC_hg19_v1_chr19_-_15443306 BC038988	-551	-	BC000156 TSC_hg19_v1_chr19_-_15443139	-718	-	TSC_hg19_v1_chr19_-_15490599 AK308251 AK303640 BC037270 Y11997 NM_005858	46750	-	DQ891853 DQ895043 TSC_hg19_v1_chr19_-_15529792 AB015332 AB025905 AJ243467 BC000713 AK001594 AK094736 AK225046 AK225291 AK310990	85919	-	TSC_hg19_v1_chr19_-_15529834 NM_014371 AK295956	85978	-	BC067129|BRD4|23476|bromodomain containing 4##BC091649|BRD4|23476|bromodomain containing 4##BC035266|BRD4|23476|bromodomain containing 4##BC047888|BRD4|23476|bromodomain containing 4##BC038988|BRD4|23476|bromodomain containing 4##BC000156|BRD4|23476|bromodomain containing 4##AK308251|AKAP8|10270|A kinase (PRKA) anchor protein 8##AK303640|AKAP8|10270|A kinase (PRKA) anchor protein 8##BC037270|AKAP8|10270|A kinase (PRKA) anchor protein 8##Y11997|AKAP8|10270|A kinase (PRKA) anchor protein 8##NM_005858|AKAP8|10270|A kinase (PRKA) anchor protein 8##DQ891853|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##DQ895043|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AB015332|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AB025905|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AJ243467|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##BC000713|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK001594|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK094736|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK225046|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK225291|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK310990|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##NM_014371|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like##AK295956|AKAP8L|26993|A kinase (PRKA) anchor protein 8-like	0.0	
chr20	44258269	44258355	reg1031914.p1	3.371	+	AF492015 AF492016 NM_130896 NM_181510	-50348	-	AK126022 CU690968 AF286368 AF286370 AX810710 AX810725 AL118493 BC053369 BC044829 AK301937 AK311906 NM_001198986 NM_020398	-82283	-	BC101600 BC101604 AF411861 NM_080827	-90182	-	AY038182 NM_080753 BC131579	89	+	AY047610 NM_147198	1594	-	AY047609 NM_147197 BC062670	40580	-	AF492015|WFDC8|90199|WAP four-disulfide core domain 8##AF492016|WFDC8|90199|WAP four-disulfide core domain 8##NM_130896|WFDC8|90199|WAP four-disulfide core domain 8##NM_181510|WFDC8|90199|WAP four-disulfide core domain 8##AK126022|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##AF286368|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##AF286370|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##AL118493|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##BC053369|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##BC044829|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##AK301937|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough##AK311906|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##NM_001198986|SPINLW1-WFDC6|100526773|SPINLW1-WFDC6 readthrough##NM_020398|SPINLW1|57119|serine peptidase inhibitor-like, with Kunitz and WAP domains 1 (eppin)##BC101600|WFDC6|140870|WAP four-disulfide core domain 6##BC101604|WFDC6|140870|WAP four-disulfide core domain 6##AF411861|WFDC6|140870|WAP four-disulfide core domain 6##NM_080827|WFDC6|140870|WAP four-disulfide core domain 6##AY038182|WFDC10A|140832|WAP four-disulfide core domain 10A##NM_080753|WFDC10A|140832|WAP four-disulfide core domain 10A##BC131579|WFDC10A|140832|WAP four-disulfide core domain 10A##AY047610|WFDC9|259240|WAP four-disulfide core domain 9##NM_147198|WFDC9|259240|WAP four-disulfide core domain 9##AY047609|WFDC11|259239|WAP four-disulfide core domain 11##NM_147197|WFDC11|259239|WAP four-disulfide core domain 11##BC062670|WFDC11|259239|WAP four-disulfide core domain 11	0.022959	
chr20	47158027	47158094	reg1045209.p1	3.371	+	TSC_hg19_v1_chr20_-_46415320 AY358461 CR749319 AY101176 NM_001161841 NM_198596	-742742	-	TSC_hg19_v1_chr20_-_46414755 AK308829 AB033073 NM_018837	-743308	-	AK289683 AK308346 AF012108 TSC_hg19_v1_chr20_+_46130679 AB209863 AF016031 BC036778 AF036892 BC119001 BC122547	-1027376	+	AB037836 TSC_hg19_v1_chr20_-_47444291	286226	-	TSC_hg19_v1_chr20_-_47444450 AJ320261 NM_020820	286379	-	TSC_hg19_v1_chr20_+_47538255 BC050449 NM_006420 BC144625 BC144626 AF084521	380258	+	AY358461|SULF2|55959|sulfatase 2##CR749319|SULF2|55959|sulfatase 2##AY101176|SULF2|55959|sulfatase 2##NM_001161841|SULF2|55959|sulfatase 2##NM_198596|SULF2|55959|sulfatase 2##AK308829|SULF2|55959|sulfatase 2##AB033073|SULF2|55959|sulfatase 2##NM_018837|SULF2|55959|sulfatase 2##AK289683|NCOA3|8202|nuclear receptor coactivator 3##AK308346|NCOA3|8202|nuclear receptor coactivator 3##AF012108|NCOA3|8202|nuclear receptor coactivator 3##AB209863|NCOA3|8202|nuclear receptor coactivator 3##AF016031|NCOA3|8202|nuclear receptor coactivator 3##AF036892|NCOA3|8202|nuclear receptor coactivator 3##BC119001|NCOA3|8202|nuclear receptor coactivator 3##BC122547|NCOA3|8202|nuclear receptor coactivator 3##AB037836|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##AJ320261|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##NM_020820|PREX1|57580|phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1##BC050449|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##NM_006420|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144625|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##BC144626|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)##AF084521|ARFGEF2|10564|ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited)	0.010415	
chr4	167942597	167942670	reg1008523.p1	3.371	+	NM_001204760 NM_012464 U91963 BC136429 BC136430 BC144084 BC144085	-1148179	+	TSC_hg19_v1_chr4_+_166300000 X51405 NM_001873 AK090962 AK127165 AK294175 AK290996 BC053612 BC033866 CU689780 DQ893322 DQ896637	-1642476	+	TSC_hg19_v1_chr4_+_166248871 NM_001017369 NM_006745 U93162 BC107879 AK295432 AK292418 AK309206	-1693778	+	AK295407 NM_001204353 AK294637 AK295015 AK295281 AK091078 AK295414 AK313042 TSC_hg19_v1_chr4_-_168155646	212978	-	BC000460 BC003017 BC013983 AB056866 AJ001454 AK294346 TSC_hg19_v1_chr4_-_168155714	213071	-	AY358973 NM_001040159 NM_001204352 NM_001204354 NM_001204355 NM_001204356 NM_001204358 NM_001251967 NM_016950 TSC_hg19_v1_chr4_-_168155748	213107	-	NM_001204760|TLL1|7092|tolloid-like 1##NM_012464|TLL1|7092|tolloid-like 1##U91963|TLL1|7092|tolloid-like 1##BC136429|TLL1|7092|tolloid-like 1##BC136430|TLL1|7092|tolloid-like 1##BC144084|TLL1|7092|tolloid-like 1##BC144085|TLL1|7092|tolloid-like 1##X51405|CPE|1363|carboxypeptidase E##NM_001873|CPE|1363|carboxypeptidase E##AK090962|CPE|1363|carboxypeptidase E##AK127165|CPE|1363|carboxypeptidase E##AK294175|CPE|1363|carboxypeptidase E##AK290996|CPE|1363|carboxypeptidase E##BC053612|CPE|1363|carboxypeptidase E##BC033866|CPE|1363|carboxypeptidase E##DQ893322|CPE|1363|carboxypeptidase E##DQ896637|CPE|1363|carboxypeptidase E##NM_001017369|MSMO1|6307|methylsterol monooxygenase 1##NM_006745|MSMO1|6307|methylsterol monooxygenase 1##U93162|MSMO1|6307|methylsterol monooxygenase 1##BC107879|MSMO1|6307|methylsterol monooxygenase 1##AK295432|MSMO1|6307|methylsterol monooxygenase 1##AK292418|MSMO1|6307|methylsterol monooxygenase 1##AK309206|MSMO1|6307|methylsterol monooxygenase 1##AK295407|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204353|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294637|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295015|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295281|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK091078|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK295414|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK313042|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC000460|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC003017|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##BC013983|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AB056866|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AJ001454|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AK294346|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##AY358973|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001040159|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204352|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204354|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204355|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204356|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001204358|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_001251967|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3##NM_016950|SPOCK3|50859|sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3	0.0	
chr4	185338522	185338625	reg1036128.p2	3.371	+	BC035035 AY358676 AK057370 NM_153343	-199508	-	TSC_hg19_v1_chr4_+_184827885 AB384196	-510662	+	TSC_hg19_v1_chr4_+_184827807 AK289840	-510753	+	TSC_hg19_v1_chr4_-_185395705 X15949 DQ409328 AK312953 NM_002199	57108	-	U13737 U13738 BC016926 TSC_hg19_v1_chr4_-_185570599 AK291337 NM_004346 NM_032991	232028	-	NM_152683 BC047467 TSC_hg19_v1_chr4_+_185570889 BX647575 BC018930 AK057729	232260	+	BC035035|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AY358676|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK057370|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##NM_153343|ENPP6|133121|ectonucleotide pyrophosphatase/phosphodiesterase 6##AK289840|STOX2|56977|storkhead box 2##X15949|IRF2|3660|interferon regulatory factor 2##DQ409328|IRF2|3660|interferon regulatory factor 2##AK312953|IRF2|3660|interferon regulatory factor 2##NM_002199|IRF2|3660|interferon regulatory factor 2##U13737|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##U13738|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##BC016926|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##AK291337|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_004346|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_032991|CASP3|836|caspase 3, apoptosis-related cysteine peptidase##NM_152683|CCDC111|201973|coiled-coil domain containing 111##BC047467|CCDC111|201973|coiled-coil domain containing 111##BX647575|CCDC111|201973|coiled-coil domain containing 111##BC018930|CCDC111|201973|coiled-coil domain containing 111##AK057729|CCDC111|201973|coiled-coil domain containing 111	0.0	
chr4	79612527	79612634	reg1039640.p2	3.371	+	TSC_hg19_v1_chr4_+_79472911 BC000871 AK313945	-139672	+	NM_005139 TSC_hg19_v1_chr4_+_79472790	-139810	+	BC006366 TSC_hg19_v1_chr4_-_79103287	-509295	-	TSC_hg19_v1_chr4_+_79697501 AL137661	84903	+	NM_017593 NM_198892 TSC_hg19_v1_chr4_+_79697532	84956	+	TSC_hg19_v1_chr4_+_79697552 AK292147 BC036021 DQ890994	85043	+	BC000871|ANXA3|306|annexin A3##AK313945|ANXA3|306|annexin A3##NM_005139|ANXA3|306|annexin A3##AL137661|BMP2K|55589|BMP2 inducible kinase##NM_017593|BMP2K|55589|BMP2 inducible kinase##NM_198892|BMP2K|55589|BMP2 inducible kinase##AK292147|BMP2K|55589|BMP2 inducible kinase##BC036021|BMP2K|55589|BMP2 inducible kinase##DQ890994|BMP2K|55589|BMP2 inducible kinase	0.0	
chr5	150160055	150160170	reg1032205.p2	3.371	+	TSC_hg19_v1_chr5_+_150158318 AK027847 BC082259 AF313413 BC009719	-1758	+	AK125286 NM_032947	-2605	+	CU693212 DQ892339 DQ895544 TSC_hg19_v1_chr5_-_150138580 AF195120 AK000299 AK296787 BC026323 AK025873 AK311693 AK307757 NM_001135643 NM_016221	-21507	-	EU742619 NM_001145805	65972	+	BC117248 BC032607 DQ908918 TSC_hg19_v1_chr5_-_150284372	124221	-	AF395541 TSC_hg19_v1_chr5_-_150284395	124286	-	AK027847|C5orf62|85027|chromosome 5 open reading frame 62##AF313413|C5orf62|85027|chromosome 5 open reading frame 62##BC009719|C5orf62|85027|chromosome 5 open reading frame 62##AK125286|C5orf62|85027|chromosome 5 open reading frame 62##NM_032947|C5orf62|85027|chromosome 5 open reading frame 62##DQ892339|DCTN4|51164|dynactin 4 (p62)##DQ895544|DCTN4|51164|dynactin 4 (p62)##AF195120|DCTN4|51164|dynactin 4 (p62)##AK000299|DCTN4|51164|dynactin 4 (p62)##AK296787|DCTN4|51164|dynactin 4 (p62)##BC026323|DCTN4|51164|dynactin 4 (p62)##AK311693|DCTN4|51164|dynactin 4 (p62)##AK307757|DCTN4|51164|dynactin 4 (p62)##NM_001135643|DCTN4|51164|dynactin 4 (p62)##NM_016221|DCTN4|51164|dynactin 4 (p62)##EU742619|IRGM|345611|immunity-related GTPase family, M##NM_001145805|IRGM|345611|immunity-related GTPase family, M##BC117248|ZNF300|91975|zinc finger protein 300##BC032607|ZNF300|91975|zinc finger protein 300##DQ908918|ZNF300|91975|zinc finger protein 300##AF395541|ZNF300|91975|zinc finger protein 300	0.0	
chr5	161654236	161654331	reg1036991.p1	3.371	+	NM_000816 NM_198903 NM_198904 BC052926 BC036030 X15376 BC059389 BC069348 BC074795 AK315200 AK299640	-159438	+	NM_001127648 AB590312 DQ890915	-376524	+	NM_001127647	-376892	+	TSC_hg19_v1_chr5_+_162864606 AK316234 NM_004060 NM_199246 AK297190 AK312913 BC007093 BX538035 D78341 L49504 BC000196	1210338	+	AB528197 AM392736 AM393438 FJ215684 AK094647 TSC_hg19_v1_chr5_-_162887097	1232795	-	AK311957 TSC_hg19_v1_chr5_-_162887119 BC017934 BX538290 NM_145266	1232850	-	NM_000816|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198903|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_198904|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC052926|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC036030|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##X15376|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC059389|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC069348|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##BC074795|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK315200|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##AK299640|GABRG2|2566|gamma-aminobutyric acid (GABA) A receptor, gamma 2##NM_001127648|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##DQ890915|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##NM_001127647|GABRA1|2554|gamma-aminobutyric acid (GABA) A receptor, alpha 1##AK316234|CCNG1|900|cyclin G1##NM_004060|CCNG1|900|cyclin G1##NM_199246|CCNG1|900|cyclin G1##AK297190|CCNG1|900|cyclin G1##AK312913|CCNG1|900|cyclin G1##BC007093|CCNG1|900|cyclin G1##BX538035|CCNG1|900|cyclin G1##D78341|CCNG1|900|cyclin G1##L49504|CCNG1|900|cyclin G1##BC000196|CCNG1|900|cyclin G1##AM392736|NUDCD2|134492|NudC domain containing 2##AM393438|NUDCD2|134492|NudC domain containing 2##FJ215684|NUDCD2|134492|NudC domain containing 2##AK311957|NUDCD2|134492|NudC domain containing 2##BC017934|NUDCD2|134492|NudC domain containing 2##BX538290|NUDCD2|134492|NudC domain containing 2##NM_145266|NUDCD2|134492|NudC domain containing 2	0.0	
chr7	99036360	99036486	reg1046911.p1	3.371	+	TSC_hg19_v1_chr7_-_99036421 AK291004 AB014532 AK001615 BC103495 BC103502 BC103661 BC080580 NM_015545	-12	-	TSC_hg19_v1_chr7_+_99006650 S77329 U11861	-29765	+	TSC_hg19_v1_chr7_+_99006591 AK297784 BC104670 NM_003910 AK316477 BC022821	-29846	+	TSC_hg19_v1_chr7_+_99036565 NM_001081559 NM_006693 BC050738	134	+	BC003101 TSC_hg19_v1_chr7_+_99036685 AB529148 CU690790 CR542161	253	+	CR456891 CR542155 AF088918 TSC_hg19_v1_chr7_-_99063788 AY046911 AK223348 AK295912 BC003678 AF047436 NM_001003713 NM_001003714 NM_001039178 NM_001198879 NM_004889	27370	-	AK291004|PTCD1|26024|pentatricopeptide repeat domain 1##AB014532|PTCD1|26024|pentatricopeptide repeat domain 1##AK001615|PTCD1|26024|pentatricopeptide repeat domain 1##BC103495|PTCD1|26024|pentatricopeptide repeat domain 1##BC103502|PTCD1|26024|pentatricopeptide repeat domain 1##BC103661|PTCD1|26024|pentatricopeptide repeat domain 1##BC080580|PTCD1|26024|pentatricopeptide repeat domain 1##NM_015545|PTCD1|26024|pentatricopeptide repeat domain 1##S77329|BUD31|8896|BUD31 homolog (S. cerevisiae)##U11861|BUD31|8896|BUD31 homolog (S. cerevisiae)##AK297784|BUD31|8896|BUD31 homolog (S. cerevisiae)##BC104670|BUD31|8896|BUD31 homolog (S. cerevisiae)##NM_003910|BUD31|8896|BUD31 homolog (S. cerevisiae)##AK316477|BUD31|8896|BUD31 homolog (S. cerevisiae)##BC022821|BUD31|8896|BUD31 homolog (S. cerevisiae)##NM_001081559|CPSF4|10898|cleavage and polyadenylation specific factor 4, 30kDa##NM_006693|CPSF4|10898|cleavage and polyadenylation specific factor 4, 30kDa##BC050738|CPSF4|10898|cleavage and polyadenylation specific factor 4, 30kDa##BC003101|CPSF4|10898|cleavage and polyadenylation specific factor 4, 30kDa##CR542161|CPSF4|10898|cleavage and polyadenylation specific factor 4, 30kDa##CR456891|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##CR542155|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##AF088918|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##AY046911|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##AK223348|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##AK295912|ATP5J2-PTCD1|100526740|ATP5J2-PTCD1 readthrough##BC003678|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##AF047436|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##NM_001003713|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##NM_001003714|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##NM_001039178|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2##NM_001198879|ATP5J2-PTCD1|100526740|ATP5J2-PTCD1 readthrough##NM_004889|ATP5J2|9551|ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2	0.0	
chr9	140720138	140720276	reg1037367.p1	3.371	+	AB028932 AB058779 TSC_hg19_v1_chr9_+_140638543	-81678	+	TSC_hg19_v1_chr9_+_140513456 BC025772 AK022941	-206740	+	BC047504 NM_001145527 NM_024757 TSC_hg19_v1_chr9_+_140513443	-206764	+	TSC_hg19_v1_chr9_+_140772233 M94172 M94173 NM_000718 NM_001243812	52027	+	TSC_hg19_v1_chr9_+_140918045 AB209467	197867	+	TSC_hg19_v1_chr9_+_141044539 AK308459	324344	+	AB028932|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AB058779|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC025772|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##AK022941|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##BC047504|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_001145527|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##NM_024757|EHMT1|79813|euchromatic histone-lysine N-methyltransferase 1##M94172|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##M94173|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_000718|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##NM_001243812|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AB209467|CACNA1B|774|calcium channel, voltage-dependent, N type, alpha 1B subunit##AK308459|TUBBP5|643224|tubulin, beta pseudogene 5	0.0	
chr9	5438921	5439041	reg1039979.p1	3.371	+	TSC_hg19_v1_chr9_-_5437869 BC008212 AF220050 AK312736 AK027594 AF225420 NM_018465	-1101	-	X00949 DQ893302 DQ896468 BC005956 NM_006911	-99173	-	HQ258745 NM_005059 NM_134441 X00948 BC126415 BC126419	-134387	-	TSC_hg19_v1_chr9_+_5450455 NM_014143 DQ836393 AK300470 AK314567 AF233516 BC069381	11526	+	AF344424 NM_025239 AF329193 EF444806 BC113678 BC113680 BC143920 BC143921 BC074766	71682	+	TSC_hg19_v1_chr9_+_5629121 NM_001135920 NM_001206557 NM_020829	190146	+	BC008212|C9orf46|55848|chromosome 9 open reading frame 46##AF220050|C9orf46|55848|chromosome 9 open reading frame 46##AK312736|C9orf46|55848|chromosome 9 open reading frame 46##AK027594|C9orf46|55848|chromosome 9 open reading frame 46##AF225420|C9orf46|55848|chromosome 9 open reading frame 46##NM_018465|C9orf46|55848|chromosome 9 open reading frame 46##X00949|RLN1|6013|relaxin 1##DQ893302|RLN1|6013|relaxin 1##DQ896468|RLN1|6013|relaxin 1##BC005956|RLN1|6013|relaxin 1##NM_006911|RLN1|6013|relaxin 1##HQ258745|RLN2|6019|relaxin 2##NM_005059|RLN2|6019|relaxin 2##NM_134441|RLN2|6019|relaxin 2##X00948|RLN2|6019|relaxin 2##BC126415|RLN2|6019|relaxin 2##BC126419|RLN2|6019|relaxin 2##NM_014143|CD274|29126|CD274 molecule##DQ836393|CD274|29126|CD274 molecule##AK300470|CD274|29126|CD274 molecule##AK314567|CD274|29126|CD274 molecule##AF233516|CD274|29126|CD274 molecule##BC069381|CD274|29126|CD274 molecule##AF344424|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_025239|PDCD1LG2|80380|programmed cell death 1 ligand 2##AF329193|PDCD1LG2|80380|programmed cell death 1 ligand 2##EF444806|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113678|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC113680|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143920|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC143921|PDCD1LG2|80380|programmed cell death 1 ligand 2##BC074766|PDCD1LG2|80380|programmed cell death 1 ligand 2##NM_001135920|KIAA1432|57589|KIAA1432##NM_001206557|KIAA1432|57589|KIAA1432##NM_020829|KIAA1432|57589|KIAA1432	0.0	
chr12	90321218	90321392	reg1028549.p2	3.370	+	TSC_hg19_v1_chr12_+_90103566 BC031240 AK094517 BC047477	-217760	+	TSC_hg19_v1_chr12_+_90102640 BC040326	-218618	+	TSC_hg19_v1_chr12_-_90049818 J04027 M95541 NM_001001323 NM_001682 BC015346	-271454	-	BC026075 BC024183 BC027600 BC034491 NM_152638	1027646	-	U59111 TSC_hg19_v1_chr12_-_91398750	1077442	-	TSC_hg19_v1_chr12_-_91398757 AK290642 BC030958 NM_004950	1077474	-	BC031240|LOC338758|338758|uncharacterized LOC338758##AK094517|LOC338758|338758|uncharacterized LOC338758##BC047477|LOC338758|338758|uncharacterized LOC338758##BC040326|LOC338758|338758|uncharacterized LOC338758##J04027|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##M95541|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001001323|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##NM_001682|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC015346|ATP2B1|490|ATPase, Ca++ transporting, plasma membrane 1##BC026075|C12orf12|196477|chromosome 12 open reading frame 12##BC024183|C12orf12|196477|chromosome 12 open reading frame 12##BC027600|C12orf12|196477|chromosome 12 open reading frame 12##BC034491|C12orf12|196477|chromosome 12 open reading frame 12##NM_152638|C12orf12|196477|chromosome 12 open reading frame 12##U59111|EPYC|1833|epiphycan##AK290642|EPYC|1833|epiphycan##BC030958|EPYC|1833|epiphycan##NM_004950|EPYC|1833|epiphycan	0.0	
chr16	29703163	29703344	reg1007877.p1	3.370	+	TSC_hg19_v1_chr16_+_29690500 BC018910 BC005060 BC010033	-12771	+	AK293195 NM_014298 TSC_hg19_v1_chr16_+_29690460	-12859	+	TSC_hg19_v1_chr16_+_29674982 AB464706 DQ892262 DQ895464	-28239	+	TSC_hg19_v1_chr16_-_29757289 BC025741 BC104466 BC104467 AY358833 AK093000 AX747848 NM_175900	54048	-	NM_152338 BC150656 TSC_hg19_v1_chr16_+_29789605 AK125559 AK312002	86333	+	TSC_hg19_v1_chr16_+_29802051 AK312234 AK223431 AK297893 AB017430 NM_007317 BC004352	98798	+	BC018910|QPRT|23475|quinolinate phosphoribosyltransferase##BC005060|QPRT|23475|quinolinate phosphoribosyltransferase##BC010033|QPRT|23475|quinolinate phosphoribosyltransferase##AK293195|QPRT|23475|quinolinate phosphoribosyltransferase##NM_014298|QPRT|23475|quinolinate phosphoribosyltransferase##DQ892262|SPN|6693|sialophorin##DQ895464|SPN|6693|sialophorin##BC025741|C16orf54|283897|chromosome 16 open reading frame 54##BC104466|C16orf54|283897|chromosome 16 open reading frame 54##BC104467|C16orf54|283897|chromosome 16 open reading frame 54##AY358833|C16orf54|283897|chromosome 16 open reading frame 54##AK093000|C16orf54|283897|chromosome 16 open reading frame 54##NM_175900|C16orf54|283897|chromosome 16 open reading frame 54##NM_152338|ZG16|653808|zymogen granule protein 16 homolog (rat)##BC150656|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK125559|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312002|ZG16|653808|zymogen granule protein 16 homolog (rat)##AK312234|KIF22|3835|kinesin family member 22##AK223431|KIF22|3835|kinesin family member 22##AK297893|KIF22|3835|kinesin family member 22##AB017430|KIF22|3835|kinesin family member 22##NM_007317|KIF22|3835|kinesin family member 22##BC004352|KIF22|3835|kinesin family member 22	0.0	
chr16	89475582	89475698	reg1043884.p2	3.370	+	AK293862 NM_001242885	-88100	+	BC041585 TSC_hg19_v1_chr16_-_89351073	-124684	-	AF130076 TSC_hg19_v1_chr16_-_89349949 AK026001 BC058001 AK057803	-125566	-	BC052290 BC069013 BC041059 BC017437 TSC_hg19_v1_chr16_-_89556970 AY373756 NM_013275	81291	-	NM_003119 NM_199367 TSC_hg19_v1_chr16_+_89574810 BC036104 Y16610 BC007692 EU832769 GQ129312 AB527784	99174	+	TSC_hg19_v1_chr16_+_89627066 BC106058 NM_000977 NM_001243130 NM_001243131	151425	+	AK293862|LOC100287036|100287036|uncharacterized LOC100287036##NM_001242885|LOC100287036|100287036|uncharacterized LOC100287036##BC041585|ANKRD11|29123|ankyrin repeat domain 11##AF130076|ANKRD11|29123|ankyrin repeat domain 11##BC058001|ANKRD11|29123|ankyrin repeat domain 11##AK057803|ANKRD11|29123|ankyrin repeat domain 11##BC052290|ANKRD11|29123|ankyrin repeat domain 11##BC069013|ANKRD11|29123|ankyrin repeat domain 11##BC041059|ANKRD11|29123|ankyrin repeat domain 11##BC017437|ANKRD11|29123|ankyrin repeat domain 11##AY373756|ANKRD11|29123|ankyrin repeat domain 11##NM_013275|ANKRD11|29123|ankyrin repeat domain 11##NM_003119|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##NM_199367|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC036104|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##Y16610|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC007692|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##EU832769|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##GQ129312|SPG7|6687|spastic paraplegia 7 (pure and complicated autosomal recessive)##BC106058|RPL13|6137|ribosomal protein L13##NM_000977|RPL13|6137|ribosomal protein L13##NM_001243130|RPL13|6137|ribosomal protein L13##NM_001243131|RPL13|6137|ribosomal protein L13	0.0	
chr17	80416182	80416286	reg1036882.p2	3.370	+	TSC_hg19_v1_chr17_+_80416087 NM_001038618 AK056966	-162	+	TSC_hg19_v1_chr17_-_80408700 AK054876 AK309201 NM_001033046 NM_001100407 NM_001100408 NM_001193653 NM_001193654 NM_001193657	-7535	-	TSC_hg19_v1_chr17_-_80408647 AK027743	-7584	-	TSC_hg19_v1_chr17_+_80416583 AK297875 NM_001083608 NM_012336 NM_031968 BC000438 AK000929 AK303155 AK307351 AF128406	329	+	TSC_hg19_v1_chr17_+_80416616 BC016440 CU674220 CU677625	408	+	TSC_hg19_v1_chr17_+_80477607 NM_004514	61356	+	NM_001038618|NARF|26502|nuclear prelamin A recognition factor##AK056966|NARF|26502|nuclear prelamin A recognition factor##AK054876|C17orf62|79415|chromosome 17 open reading frame 62##AK309201|C17orf62|79415|chromosome 17 open reading frame 62##NM_001033046|C17orf62|79415|chromosome 17 open reading frame 62##NM_001100407|C17orf62|79415|chromosome 17 open reading frame 62##NM_001100408|C17orf62|79415|chromosome 17 open reading frame 62##NM_001193653|C17orf62|79415|chromosome 17 open reading frame 62##NM_001193654|C17orf62|79415|chromosome 17 open reading frame 62##NM_001193657|C17orf62|79415|chromosome 17 open reading frame 62##AK027743|C17orf62|79415|chromosome 17 open reading frame 62##AK297875|NARF|26502|nuclear prelamin A recognition factor##NM_001083608|NARF|26502|nuclear prelamin A recognition factor##NM_012336|NARF|26502|nuclear prelamin A recognition factor##NM_031968|NARF|26502|nuclear prelamin A recognition factor##BC000438|NARF|26502|nuclear prelamin A recognition factor##AK000929|NARF|26502|nuclear prelamin A recognition factor##AK303155|NARF|26502|nuclear prelamin A recognition factor##AF128406|NARF|26502|nuclear prelamin A recognition factor##BC016440|NARF|26502|nuclear prelamin A recognition factor##NM_004514|FOXK2|3607|forkhead box K2	0.0	
chr19	16229648	16229829	reg1020159.p4	3.370	+	AK293676 TSC_hg19_v1_chr19_+_16222706 X56741 AF498943 BT007184 CR536583 CR542274 DQ892523 DQ895735 AB209767	-7016	+	TSC_hg19_v1_chr19_+_16222683 BC002977	-7122	+	TSC_hg19_v1_chr19_+_16222463 AK025165 NM_005370	-7264	+	TSC_hg19_v1_chr19_-_16243033 AY927516	13324	-	AY319652 NM_032855	15099	+	TSC_hg19_v1_chr19_-_16250705 AK095221	20966	-	AK293676|RAB8A|4218|RAB8A, member RAS oncogene family##X56741|RAB8A|4218|RAB8A, member RAS oncogene family##AF498943|RAB8A|4218|RAB8A, member RAS oncogene family##BT007184|RAB8A|4218|RAB8A, member RAS oncogene family##CR536583|RAB8A|4218|RAB8A, member RAS oncogene family##CR542274|RAB8A|4218|RAB8A, member RAS oncogene family##DQ892523|RAB8A|4218|RAB8A, member RAS oncogene family##DQ895735|RAB8A|4218|RAB8A, member RAS oncogene family##AB209767|RAB8A|4218|RAB8A, member RAS oncogene family##BC002977|RAB8A|4218|RAB8A, member RAS oncogene family##AK025165|RAB8A|4218|RAB8A, member RAS oncogene family##NM_005370|RAB8A|4218|RAB8A, member RAS oncogene family##AY319652|HSH2D|84941|hematopoietic SH2 domain containing##NM_032855|HSH2D|84941|hematopoietic SH2 domain containing	0.0	
chr19	47343659	47343839	reg1002235.p1	3.370	+	AF105230 TSC_hg19_v1_chr19_-_47291850 AB209738 AF105423 NM_005628 U53347 AK292690	-52027	-	AF334818 GQ919058 AB527629 CU674018 DQ892148 DQ895345 AF102826 TSC_hg19_v1_chr19_-_47291260 BC000062 AK125222	-52476	-	AK293433 AK301661 NM_001145144	-53207	-	BC006337 TSC_hg19_v1_chr19_-_47354069 AK312003 NM_004069 NM_021575	10382	-	AB051509 AF159851 BC131565 BC150257 NM_004491	78183	+	TSC_hg19_v1_chr19_+_47523068 BC039016	179327	+	AF105230|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AB209738|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF105423|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_005628|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##U53347|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK292690|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF334818|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##GQ919058|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ892148|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##DQ895345|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AF102826|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC000062|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK125222|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK293433|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##AK301661|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##NM_001145144|SLC1A5|6510|solute carrier family 1 (neutral amino acid transporter), member 5##BC006337|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##AK312003|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##NM_004069|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##NM_021575|AP2S1|1175|adaptor-related protein complex 2, sigma 1 subunit##AB051509|ARHGAP35|2909|Rho GTPase activating protein 35##AF159851|ARHGAP35|2909|Rho GTPase activating protein 35##BC131565|ARHGAP35|2909|Rho GTPase activating protein 35##BC150257|ARHGAP35|2909|Rho GTPase activating protein 35##NM_004491|ARHGAP35|2909|Rho GTPase activating protein 35##BC039016|NPAS1|4861|neuronal PAS domain protein 1	0.0	
chr2	237460690	237460793	reg1042835.p2	3.370	+	BC043504 NM_024726 AK294105 BC028699	-44609	-	NM_212556 BX647589	-287747	-	AB463673 AF118452 BC114458 BC137448 BC137449 BC141861 BC144646 NM_001485	-384109	-	NM_020311 TSC_hg19_v1_chr2_+_237478467 AK023507 AK291659 AF030297	17687	+	BC036499 NM_006710 NM_198189	533277	+	TSC_hg19_v1_chr2_-_237994424 AK056246	533696	-	BC043504|IQCA1|79781|IQ motif containing with AAA domain 1##NM_024726|IQCA1|79781|IQ motif containing with AAA domain 1##AK294105|IQCA1|79781|IQ motif containing with AAA domain 1##BC028699|IQCA1|79781|IQ motif containing with AAA domain 1##NM_212556|ASB18|401036|ankyrin repeat and SOCS box containing 18##BX647589|ASB18|401036|ankyrin repeat and SOCS box containing 18##AF118452|GBX2|2637|gastrulation brain homeobox 2##BC137448|GBX2|2637|gastrulation brain homeobox 2##BC137449|GBX2|2637|gastrulation brain homeobox 2##NM_001485|GBX2|2637|gastrulation brain homeobox 2##NM_020311|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AK291659|CXCR7|57007|chemokine (C-X-C motif) receptor 7##AF030297|CXCR7|57007|chemokine (C-X-C motif) receptor 7##BC036499|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_006710|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##NM_198189|COPS8|10920|COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis)##AK056246|LOC401037|401037|uncharacterized LOC401037	0.0	
chr3	45883410	45883591	reg1031666.p1	3.370	+	TSC_hg19_v1_chr3_-_45838112 AF125107	-45352	-	BC036073 TSC_hg19_v1_chr3_-_45838029 NM_020208 NM_022405	-45470	-	AF075260 HQ258580 AJ276207 AJ276208 BC126197 BC136431 BC144087 TSC_hg19_v1_chr3_-_45838004	-45542	-	TSC_hg19_v1_chr3_-_45883573 BC025988 AK024323 AJ297351 BC042483 NM_020347 BX640604	95	-	NM_006641 NM_031200 AF145439 BC069678 AK312824 AK313366 AF145440 AF145207 AJ132337	44555	+	NM_006564 Y13248	101472	+	AF125107|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC036073|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_020208|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##NM_022405|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##AF075260|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##HQ258580|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##AJ276207|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##AJ276208|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC126197|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC136431|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC144087|SLC6A20|54716|solute carrier family 6 (proline IMINO transporter), member 20##BC025988|LZTFL1|54585|leucine zipper transcription factor-like 1##AK024323|LZTFL1|54585|leucine zipper transcription factor-like 1##AJ297351|LZTFL1|54585|leucine zipper transcription factor-like 1##BC042483|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_020347|LZTFL1|54585|leucine zipper transcription factor-like 1##BX640604|LZTFL1|54585|leucine zipper transcription factor-like 1##NM_006641|CCR9|10803|chemokine (C-C motif) receptor 9##NM_031200|CCR9|10803|chemokine (C-C motif) receptor 9##AF145439|CCR9|10803|chemokine (C-C motif) receptor 9##BC069678|CCR9|10803|chemokine (C-C motif) receptor 9##AK312824|CCR9|10803|chemokine (C-C motif) receptor 9##AK313366|CCR9|10803|chemokine (C-C motif) receptor 9##AF145440|CCR9|10803|chemokine (C-C motif) receptor 9##AF145207|CCR9|10803|chemokine (C-C motif) receptor 9##AJ132337|CCR9|10803|chemokine (C-C motif) receptor 9##NM_006564|CXCR6|10663|chemokine (C-X-C motif) receptor 6##Y13248|CXCR6|10663|chemokine (C-X-C motif) receptor 6	0.0	
chr4	2283406	2283507	reg1036540.p1	3.370	+	TSC_hg19_v1_chr4_-_2263830 BC002713	-19633	-	AB463859 BT019969 BT019970 AF040963 AF082740 NM_006454 TSC_hg19_v1_chr4_-_2263788 BC068060	-19704	-	AK056134 AK293948 AK303673 TSC_hg19_v1_chr4_-_2243849 CR749640 NM_024511 BC003648	-39588	-	BC035793 AK294874 TSC_hg19_v1_chr4_-_2366542 AK316484 NM_001172659 NM_001172660	83110	-	TSC_hg19_v1_chr4_-_2420373 BC137309 BC137310 BC053664 AB046863 BC032605 NM_001172656 NM_001172657 NM_001172658 NM_020972 AK294710	136948	-	TSC_hg19_v1_chr4_+_2420681 AK126028 NM_001193282	137241	+	BC002713|MXD4|10608|MAX dimerization protein 4##BT019969|MXD4|10608|MAX dimerization protein 4##BT019970|MXD4|10608|MAX dimerization protein 4##AF040963|MXD4|10608|MAX dimerization protein 4##AF082740|MXD4|10608|MAX dimerization protein 4##NM_006454|MXD4|10608|MAX dimerization protein 4##BC068060|MXD4|10608|MAX dimerization protein 4##AK056134|HAUS3|79441|HAUS augmin-like complex, subunit 3##AK293948|HAUS3|79441|HAUS augmin-like complex, subunit 3##AK303673|POLN|353497|polymerase (DNA directed) nu##CR749640|HAUS3|79441|HAUS augmin-like complex, subunit 3##NM_024511|HAUS3|79441|HAUS augmin-like complex, subunit 3##BC003648|HAUS3|79441|HAUS augmin-like complex, subunit 3##BC035793|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AK294874|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AK316484|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172659|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172660|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC137309|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC137310|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC053664|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AB046863|ZFYVE28|57732|zinc finger, FYVE domain containing 28##BC032605|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172656|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172657|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001172658|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_020972|ZFYVE28|57732|zinc finger, FYVE domain containing 28##AK294710|ZFYVE28|57732|zinc finger, FYVE domain containing 28##NM_001193282|LOC402160|402160|uncharacterized LOC402160	0.879457	CTCF.p2:-8:0.879
chr5	126366112	126366271	reg1030184.p1	3.370	+	BC146948 BC146964 AF055007 TSC_hg19_v1_chr5_-_126366251 BC047569 AK290129	-16	-	TSC_hg19_v1_chr5_+_126113050 AB527547 DQ891592 EU176582 CU680274	-253067	+	TSC_hg19_v1_chr5_+_126112878 AK312603 M34458 BC012295 BC078178	-253309	+	NM_178450	248	-	AK126569 NM_001164478 NM_001164479	42986	-	NM_032446 CR749437 AK307919 BC020198 AB058676 BC152478	260343	+	BC146948|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC146964|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AF055007|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##BC047569|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK290129|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##DQ891592|LMNB1|4001|lamin B1##EU176582|LMNB1|4001|lamin B1##AK312603|LMNB1|4001|lamin B1##M34458|LMNB1|4001|lamin B1##BC012295|LMNB1|4001|lamin B1##BC078178|LMNB1|4001|lamin B1##NM_178450|MARCH3|115123|membrane-associated ring finger (C3HC4) 3##AK126569|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164478|C5orf63|401207|chromosome 5 open reading frame 63##NM_001164479|C5orf63|401207|chromosome 5 open reading frame 63##NM_032446|MEGF10|84466|multiple EGF-like-domains 10##CR749437|MEGF10|84466|multiple EGF-like-domains 10##AK307919|MEGF10|84466|multiple EGF-like-domains 10##BC020198|MEGF10|84466|multiple EGF-like-domains 10##AB058676|MEGF10|84466|multiple EGF-like-domains 10##BC152478|MEGF10|84466|multiple EGF-like-domains 10	0.0	
chr8	119705195	119705290	reg1043929.p1	3.370	+	TSC_hg19_v1_chr8_-_119634214 NM_001101676 NM_207506 AK311704	-71035	-	BC121818 BC124554 AK096777 TSC_hg19_v1_chr8_-_119634135	-71117	-	AK313129 S79639 TSC_hg19_v1_chr8_-_119124066 NM_000127	-581281	-	AB002146 AB528441 CU688830 DQ892264 DQ895466 AK223155 AK308524 TSC_hg19_v1_chr8_-_119964125 U94332 BC011023 BC030155 NM_002546	258978	-	AK291791 NM_006438 BC103815 BC103816 AY359038 AB002631	374227	+	TSC_hg19_v1_chr8_+_120220616 BC012367 NM_052886 AY007723 AK172820 AK312030 DQ890584 DQ893743	515397	+	NM_001101676|SAMD12|401474|sterile alpha motif domain containing 12##NM_207506|SAMD12|401474|sterile alpha motif domain containing 12##AK311704|SAMD12|401474|sterile alpha motif domain containing 12##BC121818|SAMD12|401474|sterile alpha motif domain containing 12##BC124554|SAMD12|401474|sterile alpha motif domain containing 12##AK096777|SAMD12|401474|sterile alpha motif domain containing 12##AK313129|EXT1|2131|exostosin 1##S79639|EXT1|2131|exostosin 1##NM_000127|EXT1|2131|exostosin 1##AB002146|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ892264|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##DQ895466|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK223155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK308524|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##U94332|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC011023|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##BC030155|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##NM_002546|TNFRSF11B|4982|tumor necrosis factor receptor superfamily, member 11b##AK291791|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##NM_006438|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103815|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC103816|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AY359038|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##AB002631|COLEC10|10584|collectin sub-family member 10 (C-type lectin)##BC012367|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##NM_052886|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AY007723|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK172820|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##AK312030|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ890584|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)##DQ893743|MAL2|114569|mal, T-cell differentiation protein 2 (gene/pseudogene)	0.0	
chr8	86375319	86375439	reg1002405.p1	3.370	+	AK096880 NM_005181 TSC_hg19_v1_chr8_+_86351055 AK300670 AK300677 AK313254 BC004897 CU678792	-24283	+	BC027890 NM_001128829 NM_001128830 NM_001128831 NM_001738	-85042	-	CU693312 DQ890930 DQ894091 X05014 NM_001164830	-121477	-	NM_000067 AF015039 TSC_hg19_v1_chr8_+_86376232 AK312978 BC011949 J03037 Y00339 M36532 DQ891320 DQ894504 AB591010 CU680124 CR536526 CR541875	841	+	NM_172239	200346	-	NM_172239	413926	-	AK096880|CA3|761|carbonic anhydrase III, muscle specific##NM_005181|CA3|761|carbonic anhydrase III, muscle specific##AK300670|CA3|761|carbonic anhydrase III, muscle specific##AK300677|CA3|761|carbonic anhydrase III, muscle specific##AK313254|CA3|761|carbonic anhydrase III, muscle specific##BC004897|CA3|761|carbonic anhydrase III, muscle specific##BC027890|CA1|759|carbonic anhydrase I##NM_001128829|CA1|759|carbonic anhydrase I##NM_001128830|CA1|759|carbonic anhydrase I##NM_001128831|CA1|759|carbonic anhydrase I##NM_001738|CA1|759|carbonic anhydrase I##DQ890930|CA1|759|carbonic anhydrase I##DQ894091|CA1|759|carbonic anhydrase I##X05014|CA1|759|carbonic anhydrase I##NM_001164830|CA1|759|carbonic anhydrase I##NM_000067|CA2|760|carbonic anhydrase II##AF015039|CA2|760|carbonic anhydrase II##AK312978|CA2|760|carbonic anhydrase II##BC011949|CA2|760|carbonic anhydrase II##J03037|CA2|760|carbonic anhydrase II##Y00339|CA2|760|carbonic anhydrase II##M36532|CA2|760|carbonic anhydrase II##DQ891320|CA2|760|carbonic anhydrase II##DQ894504|CA2|760|carbonic anhydrase II##CR536526|CA2|760|carbonic anhydrase II##CR541875|CA2|760|carbonic anhydrase II##NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1##NM_172239|REXO1L1|254958|REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1	0.0	
chr9	135900920	135901099	reg1013636.p2	3.370	+	TSC_hg19_v1_chr9_+_135894809 BC070500	-6202	+	AY428733 NM_001135031 NM_004188	-46912	+	TSC_hg19_v1_chr9_-_135820004 AK303030 AK308412 AK297326 AF013168 BC108668 AK299654 BC070032 NM_000368 NM_001162426 NM_001162427	-81000	-	NM_001122823 NM_012087 TSC_hg19_v1_chr9_+_135906094 AK225761 AK311481 AK055092 AF133124 BC011355 BC017337	5090	+	TSC_hg19_v1_chr9_+_135906386 AK000194 AK097295 AK293980 BC006409 AY007123 DQ892071 DQ895265 AJ420443 BC030157	5379	+	NM_001807 S79774 M85201 BC042510 AK299965	36366	+	BC070500|EEF1A1|1915|eukaryotic translation elongation factor 1 alpha 1##AY428733|GFI1B|8328|growth factor independent 1B transcription repressor##NM_001135031|GFI1B|8328|growth factor independent 1B transcription repressor##NM_004188|GFI1B|8328|growth factor independent 1B transcription repressor##AK303030|TSC1|7248|tuberous sclerosis 1##AK308412|TSC1|7248|tuberous sclerosis 1##AK297326|TSC1|7248|tuberous sclerosis 1##AF013168|TSC1|7248|tuberous sclerosis 1##BC108668|TSC1|7248|tuberous sclerosis 1##AK299654|TSC1|7248|tuberous sclerosis 1##BC070032|TSC1|7248|tuberous sclerosis 1##NM_000368|TSC1|7248|tuberous sclerosis 1##NM_001162426|TSC1|7248|tuberous sclerosis 1##NM_001162427|TSC1|7248|tuberous sclerosis 1##NM_001122823|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_012087|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK225761|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK311481|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK055092|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AF133124|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC011355|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC017337|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK000194|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK097295|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AK293980|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC006409|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AY007123|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ892071|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##DQ895265|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##AJ420443|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##BC030157|GTF3C5|9328|general transcription factor IIIC, polypeptide 5, 63kDa##NM_001807|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##S79774|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##M85201|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##BC042510|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)##AK299965|CEL|1056|carboxyl ester lipase (bile salt-stimulated lipase)	0.0	
